Modified sequence Experiment N duplicates Sequence Length Missed cleavages Proteins Leading proteins Gene names Protein names Phospho (STY) All Phospho (STY) Probabilities Max Score Min PEP Intensity Reporter intensity corrected 1 Reporter intensity corrected 2 Reporter intensity corrected 3 Reporter intensity corrected 4 Reporter intensity corrected 5 Reporter intensity corrected 6 Reporter intensity corrected 7 Reporter intensity corrected 8 Reporter intensity corrected 9 Reporter intensity corrected 10 Reporter intensity corrected 11 Phosphoproteome Fullproteome TMT Channel Normal 1 TMT Channel Normal 2 TMT Channel Normal 3 TMT Channel Normal 4 TMT Channel Normal 5 TMT Channel Normal 6 TMT Channel Normal 7 TMT Channel Normal 8 TMT Channel Normal 9 TMT Channel Normal 10 TMT Channel Normal 11 TMT Channel Ratio 1 TMT Channel Ratio 2 TMT Channel Ratio 3 TMT Channel Ratio 4 TMT Channel Ratio 5 TMT Channel Ratio 6 TMT Channel Ratio 7 TMT Channel Ratio 8 TMT Channel Ratio 9 TMT Channel Ratio 10 TMT Channel Ratio 11 Curve signal Log EC50 Curve slope Curve top Curve bottom R2 Curve RMSE Log EC50 error Curve slope error Curve top error Curve bottom error EC50 pEC50 Curve effect size Regulation (ac)AAAAAAAGDS(ph)DSWDADAFSVEDPVR ddPTM_A549_PD325901_60min_R1 2 AAAAAAAGDSDSWDADAFSVEDPVR 25 0 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 AAAAAAAGDS(0.5)DS(0.5)WDADAFSVEDPVR;AAAAAAAGDS(0.887)DS(0.113)WDADAFSVEDPVR 88.73 2.8241e-24 20883600.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AAAAAAAGDS(ph)DSWDADAFSVEDPVRK ddPTM_A549_MK2206_60min_R1 2 AAAAAAAGDSDSWDADAFSVEDPVRK 26 1 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 AAAAAAAGDS(0.819)DS(0.181)WDADAFSVEDPVRK;AAAAAAAGDS(0.821)DS(0.179)WDADAFSVEDPVRK 58.861000000000004 5.0497e-13 6407000.0 727.25 1068.5 697.1600000000001 502.46999999999997 966.8499999999999 1156.1 942.96 723.06 1518.81 1400.1399999999999 1582.43 True False 849.9920204445858 1122.8820860675 796.0277711163548 625.5751725567357 824.6276457784501 1278.4377346429299 1114.2836261280572 825.5559692783802 1174.801960041187 1083.847401560538 1189.468958153789 0.7145979007000607 0.9440196638761886 0.6692295462269934 0.5259281196608191 0.693273784175402 1.074797056181468 0.9367908413999898 0.6940542362364385 0.9876692888771414 0.9112027633262583 1.0 10.216101906570614 -7.248773295322566 24.465346775525514 0.9692878887798039 0.7100180000302124 0.41549608280248707 0.1290552102671008 400.4580768252646 773509.6900700376 0.019666684108725473 0.03390913169276996 5.639319553275918e-08 7.248773295322566 -0.25926988874959145 (ac)AAAAAAAGDS(ph)DSWDADAFSVEDPVRK ddPTM_A549_PD325901_60min_R1 2 AAAAAAAGDSDSWDADAFSVEDPVRK 26 1 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 AAAAAAAGDS(0.985)DS(0.015)WDADAFSVEDPVRK;AAAAAAAGDS(0.965)DS(0.035)WDADAFSVEDPVRK 174.53 6.8263e-97 196624000.0 3995.7 3551.8 3553.7 3201.1000000000004 3238.0 3306.2 2816.5 3331.1000000000004 3647.4 3386.1000000000004 3369.1000000000004 True False 4401.340522521129 3851.122651043183 3794.8754521340966 3398.8246767744263 3010.5740504935798 3279.275403367117 2923.683448747937 3264.658597302605 3494.1124621751665 3172.3010681245587 2954.7220584845477 1.4895954460023018 1.303378989568444 1.2843426139650023 1.1503026712832864 1.0189026212630226 1.10984225875006 0.9894952523038562 1.1048953277781468 1.1825519940671738 1.0736377247447786 1.0 11.52880671161139 -5.747661816871494 1.0341305753710326 1.0791954784665236 1.5198511352375161 0.8290279522365649 0.06012587062951516 0.36331997965078205 0.48891301528657777 0.011655779511579853 0.1453446709891658 1.7878792463368457e-06 5.747661816871494 0.4406556567709925 (ac)AAAAAAGPSPGSGPGDS(ph)PEGPEGEAPERR ddPTM_A549_PD325901_60min_R1 1 AAAAAAGPSPGSGPGDSPEGPEGEAPERR 29 1 Q9UID3;E9PKE5;A0A1W2PQZ2;E9PQD5;E9PRV0;E9PKX7 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog 1 AAAAAAGPS(0.027)PGS(0.082)GPGDS(0.891)PEGPEGEAPERR 51.607 1.6476e-06 1033300.0 183.27 0.0 110.34 0.0 0.0 125.43 0.0 0.0 226.74 0.0 120.8 True False 201.8754354837568 0.0 117.82833592832152 0.0 0.0 124.40853966618394 0.0 0.0 217.21090630958972 0.0 105.9423658142926 1.9055213080442834 0.0 1.1121927948528538 0.0 0.0 1.1743039596100853 0.0 0.0 2.0502742660130964 0.0 1.0 6.7271358209139915 -8.759391984887424 24.99999949798101 1.4959628464074406 0.49541836820607593 0.0 0.7890172744891383 47.030225293338574 574268.2797876342 0.11348353704412141 0.12558585194006086 1.7402354651210946e-09 8.759391984887424 -1.0005444782013646 (ac)AAAADS(ph)FSGGPAGVR ddPTM_A549_PD325901_60min_R1 1 AAAADSFSGGPAGVR 15 0 I3L2E0;A0A3B3ISX4;Q96E14 I3L2E0 RMI2 RecQ-mediated genome instability protein 2 1 AAAADS(0.981)FS(0.019)GGPAGVR 65.805 1.2812999999999999e-05 739720.0 275.94 232.76 242.39 181.64 207.56 199.46 144.76 0.0 0.0 197.72 265.01 True False 303.9532256637083 252.375502071291 258.84004300947856 192.85949026562946 192.9817016431275 197.83566389075222 150.26892101571153 0.0 0.0 185.23592545689368 232.4154500368021 1.3078012912462509 1.0858809172597101 1.1136955093497107 0.8298049472833707 0.8303307788383673 0.8512156307139895 0.6465530625950944 0.0 0.0 0.7970034927865693 1.0 7.860562166221966 -6.924314402314346 0.9501135439575605 0.4861591720685977 1.1765883054696074 0.457219546060331 0.2959987697869852 0.5317258119994748 0.922733173781185 0.0684377863887573 0.20529806355572472 1.1903799346541504e-07 6.924314402314346 0.6904291334010096 (ac)AAAAPDSRVS(ph)EEENLK ddPTM_A549_MK2206_60min_R1 1 AAAAPDSRVSEEENLK 16 1 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 AAAAPDS(0.03)RVS(0.97)EEENLK 74.76899999999999 1.9566999999999998e-10 2351600.0 938.8 1000.3 1171.2 1220.0 1410.1 990.16 1291.3 1285.0 1541.4 2323.0 1849.7 True False 1097.2464885436598 1051.2109973732524 1337.2937712024138 1518.9000547678809 1202.6761579481743 1094.9380739849869 1525.9124951420636 1467.152685147455 1192.2753611100047 1798.2326866064323 1390.3684408770457 0.78917677953875 0.7560664975322279 0.9618269027732301 1.0924442831928474 0.8650053630313451 0.7875164897257729 1.0974878674457804 1.055225825049635 0.8575247582273345 1.2933497580483813 1.0 10.441251525446235 -5.762082871865448 24.983254980490386 0.9485274334028246 0.7726215911193535 0.21753725243837652 0.14069459442096127 14.099135588484824 547514.906100401 0.013810716546527697 0.04707120180691935 1.7294863079753848e-06 5.762082871865448 -0.17590584228347117 (ac)AAAAPDSRVS(ph)EEENLK ddPTM_A549_PD325901_60min_R1 2 AAAAPDSRVSEEENLK 16 1 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 AAAAPDS(0.013)RVS(0.987)EEENLK;AAAAPDS(0.007)RVS(0.993)EEENLK 112.72 2.2738e-34 8356200.0 3293.3 3116.0 2644.8 2660.8 3637.8 4001.6 3477.6000000000004 2939.4 3459.1 3567.0 3883.8999999999996 True False 3627.6333916006765 3378.596255602951 2824.292032474397 2825.1515728847553 3382.2934777287037 3969.0122963262497 3609.941971015741 2880.77136108531 3313.72605634428 3341.7790112519733 3406.2049220706217 1.0650073834651876 0.9918945961563324 0.8291609275103502 0.8294132729886827 0.9929800335302839 1.165230039628238 1.0598135031820892 0.8457422342441153 0.9728498819530436 0.9810857208263665 1.0 11.733949516848776 -6.944296441140494 24.99993764007654 0.9957487691840574 0.9243671866797358 0.1198660865644876 0.09463215015263576 160.4449322100036 72007.13753747354 0.014168720267869132 0.026776371952739852 1.1368510280682478e-07 6.944296441140494 -0.07138158250432158 (ac)AAAAPDSRVS(ph)EEENLKK ddPTM_A549_MK2206_60min_R1 2 AAAAPDSRVSEEENLKK 17 2 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 AAAAPDS(0.037)RVS(0.963)EEENLKK;AAAAPDS(0.001)RVS(0.999)EEENLKK 140.2 1.1691e-48 177559000.0 7340.6 9354.7 7484.0 8227.1 10520.1 7788.6 7732.0 8287.1 9881.3 10216.5 10674.6 True False 8579.513819560703 9830.814272845708 8545.343736064598 10242.73986932855 8972.607225892203 8612.784482345749 9136.804315370886 9461.821803179359 7643.201327193647 7908.585554332594 8023.802216027524 1.0692578890370885 1.2252064555141553 1.0649992990848274 1.2765444104378225 1.1182488032879778 1.0734043849113994 1.1387125541454828 1.179219221565481 0.9525660181312011 0.9856406403606528 1.0 12.970070329112552 -8.763465845579063 24.999941142439006 0.9776006116431287 1.1444631714128066 0.5702023920100822 0.06332168731984447 25.012484244767702 308571.08289207786 0.010235891984631956 0.01116140881924229 1.7239876660517812e-09 8.763465845579063 0.1668625597696779 (ac)AAAAPDSRVS(ph)EEENLKK ddPTM_A549_PD325901_60min_R1 1 AAAAPDSRVSEEENLKK 17 2 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 AAAAPDS(0.003)RVS(0.997)EEENLKK 147.9 4.6337e-49 131160000.0 13253.0 14152.0 11863.0 12512.0 14508.0 12352.0 11493.0 12471.0 12658.0 13577.0 17222.0 True False 14598.434803657052 15344.638706448311 12668.094518014113 13284.837823186284 13489.008129882899 12251.409407292542 11930.372404210912 12222.256121689756 12126.028279380726 12719.745902934683 15103.803179252869 0.9665403230167876 1.0159453565659715 0.8387354077425656 0.8795690506239394 0.8930868583094282 0.8111473158046393 0.7898919406337936 0.8092171207897286 0.8028460206656742 0.8421551679385617 1.0 13.882624249430304 -5.7568343694686135 24.999701743725186 0.8783180613273867 0.9912428690268211 0.37811666146752576 0.0617349309285709 134.98509417681421 732779.6143181144 0.01183127026556515 0.04294194656421384 1.750514169615236e-06 5.7568343694686135 0.11292480769943447 (ac)AAAAPDSRVS(ph)EEENLKKT(ph)PK ddPTM_A549_PD325901_60min_R1 1 AAAAPDSRVSEEENLKKTPK 20 3 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 2 AAAAPDS(0.444)RVS(0.556)EEENLKKT(1)PK 68.43 1.7806e-05 29990000.0 4447.9 4577.1 4255.3 3930.3 4730.0 4898.8 4004.7 4462.6 5185.9 4239.9 5911.3 True False 4899.447533629082 4962.828280333846 4544.090247197629 4173.065704641069 4397.781117614153 4858.905796991963 4157.101049955923 4373.589942158023 4967.954657453032 3972.191990414138 5184.247574818112 0.9450643440385806 0.9572899844598887 0.8765187583382448 0.8049510839164504 0.8482968944183665 0.937244166461791 0.8018716293852486 0.8436306096572692 0.9582788217106571 0.7662041469062174 1.0 12.339918900730636 -8.903278433785639 4.424299221829689 0.982258825240699 0.8758709950706726 0.0 0.08238139964688362 0.14512614026609852 4.879155708181785 0.009575595341130845 0.010065366736809486 1.2494577241867717e-09 8.903278433785639 -0.1063878301700264 (ac)AAAMDVDTPSGT(ph)NSGAGK ddPTM_A549_MK2206_60min_R1 1 AAAMDVDTPSGTNSGAGK 18 0 P62877 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed 1 AAAMDVDT(0.301)PS(0.301)GT(0.388)NS(0.011)GAGK 52.254 0.00027972 1378300.0 539.14 409.41 489.82 678.76 703.72 477.16 507.17 596.09 584.29 748.41 811.86 True False 630.1336512925318 430.24722026850264 559.2838413681402 845.0562304706941 600.2037202122475 527.6527544868266 599.3162240851855 680.5875829490637 451.9492479194007 579.3436612066811 610.2527558038805 1.0325781330761257 0.7050311795835184 0.9164790098020952 1.3847643004209118 0.9835329943272513 0.8646462461144551 0.9820786852420053 1.1152552388764418 0.7405935386953755 0.9493503399972636 1.0 9.253263094776017 -8.757009728207866 24.993622015634603 0.8775025080912019 0.9929876434884488 0.06297501972074027 0.16905351644778158 232.44758134439718 1311547.9657172149 0.0313147732660986 0.03491448346855593 1.7498074924516125e-09 8.757009728207866 0.11548513539724692 (ac)AAAS(ph)VTPPGSLELLQPGFSK ddPTM_A549_PD325901_60min_R1 2 AAASVTPPGSLELLQPGFSK 20 0 B1AMY1;B1AMX7;B1AMX8;Q12933-4;Q12933-3;Q12933;Q12933-2 B1AMY1 TRAF2 TNF receptor-associated factor 2 1 AAAS(0.468)VT(0.468)PPGS(0.064)LELLQPGFSK;AAAS(0.476)VT(0.476)PPGS(0.048)LELLQPGFSK 79.646 3.2654000000000004e-10 21646300.0 2398.4 2386.62 2670.6000000000004 2491.7 3139.0 2242.6000000000004 2649.0 2806.3999999999996 3116.8999999999996 2795.1 3623.3999999999996 True False 2641.8838023912394 2587.7488432436194 2851.8429756223986 2645.606649938718 2918.5274689621197 2224.3370091316597 2749.8091445884193 2750.42415042179 2985.9075323117227 2618.6169089852488 3177.7447706250637 0.831370671053478 0.8143350174515772 0.8974424258312728 0.8325422086740862 0.9184272745693306 0.6999734622155107 0.8653335440931371 0.86552707940757 0.9396310112483934 0.8240488453294397 1.0 11.633787539952564 -8.882754262484513 1.3262909852542168 0.980480388401321 0.83597605319745 0.09043068080288397 0.0711960094440373 0.1960600806435163 0.688540102860192 0.010846791861895697 0.011015376407115867 1.3099229090398397e-09 8.882754262484513 -0.14450433520387096 (ac)AAAVAAAGAGEPQS(ph)PDELLPK ddPTM_A549_PD325901_60min_R1 2 AAAVAAAGAGEPQSPDELLPK 21 0 Q9NS69 Q9NS69 TOMM22 Mitochondrial import receptor subunit TOM22 homolog 1 AAAVAAAGAGEPQS(1)PDELLPK;AAAVAAAGAGEPQS(1)PDELLPK 71.558 2.0399e-16 24395000.0 1788.67 1698.97 1948.78 1853.71 2018.0700000000002 2146.63 1525.62 1711.24 1839.08 1764.71 1797.31 True False 1970.2544616507407 1842.1481644357332 2081.0359297661275 1968.2094566191367 1876.3277251635498 2129.1485569929077 1583.6783039512973 1677.1079757581906 1761.7898631729747 1653.2859094327082 1576.2522640868062 1.2499613840632278 1.1686886714817646 1.320242944089768 1.2486639997052813 1.1903727391316965 1.3507663750931511 1.004711200125567 1.0639844991625211 1.1177080619095312 1.0488713939393013 1.0 10.622282727465835 -7.77058948529149 24.999994107328494 1.0542912814627425 1.2506389445633994 0.7713674279643644 0.05622459168339288 79.14226330765753 216232.95970807847 0.009666354348584804 0.013457150730276283 1.695940122037268e-08 7.77058948529149 0.19634766310065688 (ac)AAAVAAPLAAGGEEAAATTSVPGS(ph)PGLPGRR ddPTM_A549_MK2206_60min_R1 1 AAAVAAPLAAGGEEAAATTSVPGSPGLPGRR 31 1 O75427 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 AAAVAAPLAAGGEEAAAT(0.055)T(0.055)S(0.055)VPGS(0.835)PGLPGRR 50.942 1.6687e-06 1515100.0 512.94 475.48 356.11 457.24 541.1 619.15 283.05 368.12 805.5 423.89 795.74 True False 599.5117318210322 499.67990106071585 406.61175278593885 569.2638205262833 461.50490679083543 684.6680420414924 334.4765211414549 420.30213732021883 623.0555361191826 328.13295459560925 598.1357966932476 1.002300372482957 0.8353954132542504 0.6797983919936974 0.9517300647669292 0.7715721234914101 1.1446698990875188 0.5591983007714724 0.7026868140041612 1.0416623441761923 0.5485927383207453 1.0 9.224329251079093 -8.782984753632348 24.99004313601723 1.0196739146181144 0.8294806025412678 0.0 0.20929889469570995 236.4558731759986 274259.20091344404 0.025551680090765673 0.02721380529729267 1.6482202530271024e-09 8.782984753632348 -0.19019331207684664 (ac)AAAVAAPLAAGGEEAAATTSVPGS(ph)PGLPGRR ddPTM_A549_PD325901_60min_R1 1 AAAVAAPLAAGGEEAAATTSVPGSPGLPGRR 31 1 O75427 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 AAAVAAPLAAGGEEAAAT(0.015)T(0.015)S(0.015)VPGS(0.955)PGLPGRR 51.848 1.5464e-06 3176000.0 634.56 853.91 589.07 652.93 884.27 692.24 554.13 553.8 460.66 625.85 684.64 True False 698.980064061618 925.8719924974058 629.0478325656732 693.2600031883804 822.1619257658917 686.6026269514401 575.2177203815706 542.7540245523046 441.300062188302 586.3337241917711 600.4336202905401 1.164125459402811 1.5420055793168133 1.0476559128406018 1.1545989094563411 1.3692802967429787 1.1435112954188078 0.9580038507890881 0.9039367653824493 0.734968941237441 0.9765171442399473 1.0 9.229860950325039 -7.74697587610399 2.3854176121085056 0.8748091095079015 1.2554722986534963 0.5862776030982124 0.13654196421320175 0.1530143856900373 1.7874084822216212 0.02346461229184433 0.035298436440206866 1.7907053201601508e-08 7.74697587610399 0.3806631891455948 (ac)AADVSVT(ph)HRPPLSPK ddPTM_A549_PD325901_60min_R1 1 AADVSVTHRPPLSPK 15 1 A0A087WZ13;Q8IY67-2;Q8IY67;Q8IY67-3 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 AADVS(0.259)VT(0.462)HRPPLS(0.28)PK 127.97 9.160299999999999e-29 128760000.0 2839.6 3077.1 2725.7 2589.1 3271.9 2787.1 3114.6 2844.0 3121.4 3436.4 3210.2 True False 3127.8741015969654 3336.4180160833907 2910.6823929656157 2749.0228267272696 3042.0930314422294 2764.4027816600615 3233.127807374515 2787.2741889251624 2990.218412960893 3219.425117540307 2815.365751134454 1.1110009775236436 1.185074448937577 1.0338558646572844 0.9764354154054579 1.0805320872488469 0.981898277531487 1.148386424062921 0.9900220558561629 1.0621065528540943 1.1435193158270953 1.0 11.45910664322731 -5.773586738229047 24.86353534647349 1.0321430333247845 1.1480377033964007 0.2727672731322598 0.060556598775193864 113.36435486716228 232038.91947740444 0.00646800389611383 0.020326627419333654 1.6842760059493393e-06 5.773586738229047 0.11589467007161613 (ac)AADVSVTHRPPLS(ph)PK ddPTM_A549_MK2206_60min_R1 4 AADVSVTHRPPLSPK 15 1 A0A087WZ13;Q8IY67-2;Q8IY67;Q8IY67-3 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 AADVS(0.227)VT(0.155)HRPPLS(0.618)PK;AADVS(0.035)VT(0.063)HRPPLS(0.902)PK;AADVS(0.165)VT(0.015)HRPPLS(0.819)PK;AADVS(0.005)VT(0.002)HRPPLS(0.993)PK 108.71 8.703499999999999e-21 154940000.0 7004.5 7539.43 7212.54 6958.610000000001 9834.58 7181.43 7076.67 6594.33 9862.990000000002 10674.1 10750.0 True False 8186.688356416774 7923.154783490771 8235.386626151167 8663.469762383878 8387.92630978935 7941.364155952572 8362.409337099805 7529.096471788648 7629.038512958588 8262.813396515587 8080.478315093384 1.0131440290019715 0.9805304184396175 1.0191706858204708 1.07214813585992 1.0380482420355848 0.98278392024381 1.034890387797936 0.9317637122700003 0.9441320445979592 1.0225648871653579 1.0 12.98022497892493 -8.244170683250953 24.836838435537036 0.9697416974671661 1.0198011109077396 0.30006673652346816 0.03311421919067691 677.3646802089501 974226.1792746458 0.005440641301964431 0.007014540448894802 5.6994023450310106e-09 8.244170683250953 0.05005941344057352 (ac)AADVSVTHRPPLS(ph)PK ddPTM_A549_PD325901_60min_R1 1 AADVSVTHRPPLSPK 15 1 A0A087WZ13;Q8IY67-2;Q8IY67;Q8IY67-3 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 AADVS(0.19)VT(0.099)HRPPLS(0.712)PK 76.704 1.829e-07 123130000.0 3937.8 3915.3 3956.1 3575.2 4215.3 4112.0 4021.2 3632.4 4250.1 4070.4 4993.5 True False 4337.562557144854 4245.256071746543 4224.584735961871 3796.0319841316787 3919.2318699955476 4078.513235329257 4174.228966485072 3559.9489324373235 4071.4830771208767 3813.3942493411905 4379.3311564045525 0.9904623336833949 0.9693845749796903 0.9646643711297391 0.8668063337891614 0.8949384575002662 0.9313096200465762 0.9531658642394447 0.8128978616360346 0.9297043159585081 0.87077092668918 1.0 12.096494832337694 -10.299012641230528 1.0193842779961308 0.9944166106991871 0.9231276118622245 0.0 0.06085503764795255 0.5204419347441147 1.0625738091331396 0.02167159730772658 0.009172474332358654 5.0232796779375863e-11 10.299012641230528 -0.0712889988369626 (ac)AAGGAAPETPAIS(ph)PSKR ddPTM_A549_MK2206_60min_R1 2 AAGGAAPETPAISPSKR 17 1 H0YNW5;H0YMM5 H0YNW5 DUT 1 AAGGAAPET(0.056)PAIS(0.798)PS(0.146)KR;AAGGAAPET(0.01)PAIS(0.781)PS(0.209)KR 62.475 4.1491000000000006e-05 11802800.0 6215.9 7680.299999999999 6265.299999999999 6086.200000000001 9611.599999999999 7635.5 6790.099999999999 7186.0 10083.8 9560.3 8725.6 True False 7264.991955835677 8071.194464786349 7153.81375061004 7577.319273219898 8197.746372409532 8443.483541965299 8023.773277521967 8204.637506202034 7799.835400519695 7400.621590083289 6558.792705691054 1.1076721405651158 1.2305914864153256 1.09072112378284 1.1552917759765557 1.249886486776196 1.2873533165088298 1.2233613162617187 1.2509371578526767 1.1892181611033066 1.1283511954359804 1.0 12.679214563254298 -10.414671499184314 0.8098997905031323 1.0021513293459872 1.2006474088652923 0.31177943229246874 0.06824603620710204 0.334109945774402 0.40334681179978227 0.03832039143743164 0.01192566619258519 3.848827977335424e-11 10.414671499184314 0.19849607951930515 (ac)AAGGDHGS(ph)PDSYR ddPTM_A549_MK2206_60min_R1 2 AAGGDHGSPDSYR 13 0 B4DEP1;A0A1W2PRX2;A0A096LP72;A0A096LNY4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;A0A1B0GWJ0;A0A1B0GTJ7;A0A0A6YY92;P30566-2;P30566 B4DEP1 ADSL Adenylosuccinate lyase 1 AAGGDHGS(0.993)PDS(0.007)YR;AAGGDHGS(0.984)PDS(0.016)YR 86.944 7.4112e-19 87423000.0 229.86 142.03 0.0 0.0 0.0 0.0 143.15 0.0 0.0 354.65 128.33 True False 268.65474846255375 149.25872034082084 0.0 0.0 0.0 0.0 169.15850203638678 0.0 0.0 274.53431868487775 96.46211927217992 2.7850803039534187 1.5473298893596639 0.0 0.0 0.0 0.0 1.753626224602063 0.0 0.0 2.8460324193193896 1.0 6.591890601336723 -5.48536333193269 3.1529627056892244 0.4351381200088278 2.73436810490953 0.31996112653206776 0.9087498197688002 0.13840538531770524 2.5222563410135965 0.08208677370506343 0.5896998047921511 3.270669552938976e-06 5.48536333193269 2.299229984900702 (ac)AAGGDHGS(ph)PDSYR ddPTM_A549_PD325901_60min_R1 2 AAGGDHGSPDSYR 13 0 B4DEP1;A0A1W2PRX2;A0A096LP72;A0A096LNY4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;A0A1B0GWJ0;A0A1B0GTJ7;A0A0A6YY92;P30566-2;P30566 B4DEP1 ADSL Adenylosuccinate lyase 1 AAGGDHGS(0.97)PDS(0.03)YR;AAGGDHGS(0.983)PDS(0.017)YR 112.82 1.3093e-46 120121000.0 472.61 140.71 316.81 136.65 0.0 349.05 152.07 339.03 247.45 423.61 359.44 True False 520.589019282907 152.56812552178798 338.310631733293 145.0905601453329 0.0 346.20745252715847 157.857107065897 332.26778068611026 237.05053703055464 396.86319230626503 315.23115867789164 1.6514516568295627 0.4839880872235875 1.0732144409588151 0.46026719171371255 0.0 1.098265330049175 0.5007661924283252 1.0540448541942102 0.751989549588836 1.2589592791865678 1.0 8.300266333224988 -10.660250291207594 0.5776380649037455 1.0324141089388996 0.7522858291505833 0.07002689315043742 0.42386270220161115 3.434475509941789 1.6633873678251254 0.5076333323752411 0.08715118815116078 2.18650114341653e-11 10.660250291207594 -0.28012827978831634 (ac)AAGGDHGS(ph)PDSYRSPLASR ddPTM_A549_MK2206_60min_R1 2 AAGGDHGSPDSYRSPLASR 19 1 B4DEP1;A0A1W2PRX2;A0A096LP72;A0A096LNY4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;A0A1B0GWJ0;A0A1B0GTJ7;A0A0A6YY92;P30566-2;P30566 B4DEP1 ADSL Adenylosuccinate lyase 1 AAGGDHGS(0.979)PDS(0.018)YRS(0.003)PLAS(0.001)R;AAGGDHGS(0.916)PDS(0.05)YRS(0.013)PLAS(0.021)R 51.833999999999996 0.0019729 14572900.0 500.76 430.82 584.69 683.0699999999999 697.52 386.07 679.98 470.89 741.01 867.29 728.86 True False 585.2760455934415 452.74689781899895 667.6078339176391 850.4221806641771 594.9157319991571 426.9236711474748 803.5235641963135 537.640099540144 573.1724181498143 671.3685866409348 547.8639464873456 1.0682872077017755 0.826385639576771 1.218565007239547 1.55225067485586 1.0858822446950307 0.7792512609831604 1.4666480051263475 0.9813387118959875 1.0461948113664628 1.2254293989327911 1.0 9.097673856504333 (ac)AAGGDHGS(ph)PDSYRSPLASR ddPTM_A549_PD325901_60min_R1 1 AAGGDHGSPDSYRSPLASR 19 1 B4DEP1;A0A1W2PRX2;A0A096LP72;A0A096LNY4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;A0A1B0GWJ0;A0A1B0GTJ7;A0A0A6YY92;P30566-2;P30566 B4DEP1 ADSL Adenylosuccinate lyase 1 AAGGDHGS(0.943)PDS(0.044)YRS(0.012)PLAS(0.001)R 60.99100000000001 9.1173e-08 12502000.0 357.63 172.26 304.06 402.79 344.52 281.5 300.83 394.12 445.3 321.69 235.76 True False 393.93633432670873 186.77695474652256 324.69534006131437 427.6694234975384 320.3221037294774 279.20755733102754 312.2782502704925 386.2589674188413 426.585589572463 301.3784385000411 206.763014605775 1.905255323723191 0.9033383223911738 1.5703743760962048 2.0684038889303045 1.549223415707205 1.3503747653485274 1.5103196810411101 1.8681240847416667 2.0631619750070533 1.4576032327380444 1.0 7.69183433182555 -11.054608967687736 1.3854616621503313 1.0029400855944852 1.6757699279871963 0.12769742082537228 0.34798622990165784 0.39513528884028626 1.36244470129471 0.24359152400272363 0.055226824416132976 8.818425135875336e-12 11.054608967687736 0.672829842392711 (ac)AAGVIR ddPTM_A549_MK2206_60min_R1 1 AAGVIR 6 0 A0A1W2PR82 A0A1W2PR82 0 42.565 0.016315 1079200.0 108.17 111.05 181.2 163.93 181.39 134.14 141.17 238.17 220.82 287.61 291.95 False True 126.42645149740918 116.70197066709956 206.8968846839799 204.09285735909728 154.70777128588006 148.33460576507437 166.81876166592195 271.9313268650345 170.80462257708 222.6387012461798 219.45075758990828 0.5761039646701273 0.5317911496354125 0.9427941236393996 0.9300166451942236 0.7049771574495329 0.6759357196764388 0.7601648930174089 1.2391450813452995 0.7783277873037275 1.0145269202589353 1.0 7.777753440465865 -3.9416901514740315 0.26572166898254357 0.93235515186625 3.185264510248235e-36 0.34560121439221503 0.16422220768487278 17.97194738292506 0.5384169984045479 0.0776269694363451 6.25267885325544 0.00011436940152458316 3.9416901514740315 -0.93235515186625 (ac)AALGHLAGEAAAAPGPGT(ph)PCASR ddPTM_A549_MK2206_60min_R1 2 AALGHLAGEAAAAPGPGTPCASR 23 0 A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2 A0A3B3IRR6 C8orf33 UPF0488 protein C8orf33 1 AALGHLAGEAAAAPGPGT(0.984)PCAS(0.016)R;AALGHLAGEAAAAPGPGT(0.995)PCAS(0.005)R 115.96 1.3665999999999994e-87 22531000.0 1370.95 2114.2 1634.47 1277.85 2103.88 2125.5 1666.07 1557.67 2862.1 2245.7 2773.4 True False 1602.3328434905534 2221.8037495216727 1866.2624233411957 1590.9233073648652 1794.4020389929838 2350.418999207287 1968.7733530406067 1778.4744926643089 2213.8389198345303 1738.3948102936129 2084.688238053953 0.7686198896513773 1.0657726699680123 0.8952237506186265 0.7631468717116114 0.8607531842113956 1.1274678660831285 0.9443970168308945 0.8531129308450011 1.0619520364834691 0.8338871868516881 1.0 11.025615931620473 -7.230600481053236 24.747818470595195 1.0143245904749953 0.87692733306332 0.09731532143511645 0.11267294552693653 577.9411491582574 463790.48910872074 0.014508443712933182 0.025127497216170087 5.8803004813990465e-08 7.230600481053236 -0.1373972574116753 (ac)AALGHLAGEAAAAPGPGT(ph)PCASR ddPTM_A549_PD325901_60min_R1 2 AALGHLAGEAAAAPGPGTPCASR 23 0 A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2 A0A3B3IRR6 C8orf33 UPF0488 protein C8orf33 1 AALGHLAGEAAAAPGPGT(0.971)PCAS(0.029)R;AALGHLAGEAAAAPGPGT(0.995)PCAS(0.005)R 96.12799999999999 2.8945999999999997e-50 32938000.0 4410.1 4545.0 4371.7 4590.1 5489.2 5253.200000000001 4846.299999999999 4555.799999999999 4642.1 5864.7 5079.9 True False 4857.810105455969 4928.023100678887 4668.3898511676925 4873.620052126544 5103.657528711966 5210.419680892912 5030.728598497114 4464.9309950440365 4447.008680337593 5494.401841124036 4455.104504139278 1.0903919539805482 1.10615207703887 1.0478743757481443 1.0939406803136535 1.14557526629737 1.1695392725472238 1.1292055200552575 1.0022056701241528 0.9981827982274798 1.2332823699240134 1.0 12.121243558347597 -8.267921751435065 24.170178940185256 0.9993476801004497 1.111966120659749 0.0 0.07652019694962786 124.27291219318667 463362.91749041073 0.0053257332151329505 0.006520505879407938 5.396078370482914e-09 8.267921751435065 0.11261844055929937 (ac)AALHT(ph)TPDSPAAQLER ddPTM_A549_PD325901_60min_R1 1 AALHTTPDSPAAQLER 16 0 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 1 AALHT(0.479)T(0.242)PDS(0.28)PAAQLER 52.522 2.7814e-08 3935700.0 545.26 369.43 605.17 431.54 682.15 404.78 391.03 385.53 722.17 814.74 553.39 True False 600.6143938008037 400.5631626146976 646.2404753828378 458.19524570155096 634.2381372897447 401.4836058843812 405.91086062982646 377.840301707566 691.819706313824 763.2971773556013 485.32653822824 1.2375469843323217 0.8253477423200795 1.3315580840521088 0.9440968288572555 1.3068276455788501 0.827244286599409 0.8363665051403684 0.7785280052620465 1.4254726494854773 1.5727497205121657 1.0 8.922811940302303 -8.762913906477769 24.99991598247949 1.200917621403605 1.0111329940884377 0.21679806118428402 0.23891734605448559 63.15842516612915 1070817.428131055 0.04014115463220816 0.04385792110248886 1.7261800519703696e-09 8.762913906477769 -0.18978462731516732 (ac)AALHTTPDS(ph)PAAQLER ddPTM_A549_PD325901_60min_R1 1 AALHTTPDSPAAQLER 16 0 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 1 AALHT(0.332)T(0.042)PDS(0.626)PAAQLER 92.38 1.9333e-21 2347900.0 423.88 301.88 460.07 762.86 347.76 457.21 424.6 567.97 435.14 331.83 637.81 True False 466.91198555603677 327.3204870479522 491.2931168256562 809.9801296192361 323.33453730687046 453.48663334749216 440.7583853500355 556.6413927861547 416.85257904011144 310.87819716953777 559.3634134107116 0.8347202808797355 0.5851660641373012 0.8783075636463287 1.4480391641641204 0.5780401963284335 0.8107191540868984 0.7879642729268198 0.9951337170803514 0.745226750706411 0.5557714175011228 1.0 9.12764208352965 -11.078124660205496 1.3969067425618522 1.0000435086179955 0.8413435532891628 0.0 0.25791713188262383 1.0613455239693277 3.69607779970375 0.15692350539285632 0.034496455308332404 8.353632005505493e-12 11.078124660205496 -0.15869995532883274 (ac)AALT(ph)PR ddPTM_A549_MK2206_60min_R1 1 AALTPR 6 0 Q56NI9;E5RFE4;E5RFP7;E5RIE3 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 AALT(1)PR 49.358000000000004 0.0067946 25567000.0 0.0 167.93 0.0 0.0 322.58 0.0 0.0 0.0 332.82 163.33 179.81 True False 0.0 176.4769197129764 0.0 0.0 275.12890931914217 0.0 0.0 0.0 257.4368014043281 126.43363956238856 135.15821449645966 0.0 1.305706207872397 0.0 0.0 2.035606273315699 0.0 0.0 0.0 1.904707030670869 0.9354491699481601 1.0 7.0785053868353796 -8.760307330156866 24.999999524120614 1.4272227678972578 0.44550832602514523 0.23284649748323016 0.6816805199466088 27.692404087981593 611553.5680807034 0.1177058019913753 0.12983718371512384 1.736571502343606e-09 8.760307330156866 -0.9817144418721125 (ac)AAPCGSELPANS(ph)PLKIPK ddPTM_A549_MK2206_60min_R1 1 AAPCGSELPANSPLKIPK 18 1 B4E1M0;E9PPE2;Q6P1R3-3;Q6P1R3 B4E1M0 MSANTD2 Myb/SANT-like DNA-binding domain-containing protein 2 1 AAPCGS(0.013)ELPANS(0.987)PLKIPK 64.65 0.0011612999999999999 1690100.0 1142.0 916.81 935.79 923.91 1198.4 1041.8 1157.8 922.45 1627.7 1737.2 1914.5 True False 1334.7416807806353 963.4717129878748 1068.499093368772 1150.2679914758953 1022.1169475108804 1152.042584509129 1368.1572731940519 1053.2101123846453 1259.0285489027858 1344.765313462201 1439.076812488027 0.9274985665796351 0.6695068009067033 0.7424892709663209 0.7993096556723691 0.7102587844103592 0.8005428025188989 0.9507187255895244 0.7318651118863803 0.8748862729057841 0.93446388809311 1.0 10.490927884410906 -9.55303740944693 0.38490533838817237 1.0198654740052766 0.7612370445087814 0.3903914486094737 0.08326031135666763 0.7225311118390051 0.24549097144529372 0.07317279009184131 0.033176833908259144 2.798740230148036e-10 9.55303740944693 -0.2586284294964952 (ac)AAPEEHDSPT(ph)EASQPIVEEEETK ddPTM_A549_MK2206_60min_R1 1 AAPEEHDSPTEASQPIVEEEETK 23 0 Q9H0S4;Q9H0S4-2;F5H1N9 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 AAPEEHDS(0.315)PT(0.343)EAS(0.343)QPIVEEEETK 52.541000000000004 7.2548e-16 18440000.0 773.1 638.89 705.99 505.73 863.35 574.42 660.12 742.16 984.1 1101.5 1056.5 True False 903.5803795197096 671.4067720801731 806.109997892069 629.6338727030827 736.3523586728295 635.2047431308633 780.0552592683176 847.3634527696776 761.202921284777 852.6703849750256 794.1418920833639 1.1378072212627433 0.8454493822493035 1.0150704879417805 0.792848077881009 0.9272302166821492 0.7998630338773056 0.9822618187562285 1.0670176969844662 0.9585225623695857 1.073700296477393 1.0 9.633252991495686 -7.9573507727183 24.99997224806406 0.9881844107326487 0.9132303146639262 0.16522292910403835 0.09885139000315585 214.24028296165318 125582.08142796317 0.01366464094317529 0.018880409242044593 1.1031872332583374e-08 7.9573507727183 -0.0749540960687225 (ac)AAPEEHDSPT(ph)EASQPIVEEEETK ddPTM_A549_PD325901_60min_R1 1 AAPEEHDSPTEASQPIVEEEETK 23 0 Q9H0S4;Q9H0S4-2;F5H1N9 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 AAPEEHDS(0.314)PT(0.343)EAS(0.343)QPIVEEEETK 61.89 1.4377e-16 29565000.0 1635.9 1963.5 2166.7 1543.7 2401.6 2443.7 1843.4 2141.1 1719.6 2130.4 2062.8 True False 1801.9753637140707 2128.9710359038495 2313.745291425541 1639.0508430029304 2232.919901070221 2423.7993174061526 1913.5515957471846 2098.3940808395428 1647.3311920700814 1995.8861804236617 1809.0886771665782 0.9960680128385699 1.1768196124240167 1.278956261585454 0.9060091214378924 1.2342788550130408 1.339790220345828 1.05774339306806 1.1599177571140842 0.9105862044585654 1.1032550286864038 1.0 10.821047411788129 -8.75490935013839 24.99966789035298 0.9577768161257544 1.1480782571767465 0.16669707604964756 0.12696383224077695 123.37877896208236 472344.6923748614 0.019804118832124178 0.022198191336440628 1.7582905819290102e-09 8.75490935013839 0.19030144105099212 (ac)AAPEEHDSPTEAS(ph)QPIVEEEETK ddPTM_A549_MK2206_60min_R1 1 AAPEEHDSPTEASQPIVEEEETK 23 0 Q9H0S4;Q9H0S4-2;F5H1N9 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 AAPEEHDS(0.299)PT(0.323)EAS(0.377)QPIVEEEETK 52.50899999999999 1.4259e-16 22950000.0 2146.9 2446.9 2501.1 2170.4 2913.9 2457.7 2505.7 3095.4 3872.4 3237.9 3194.6 True False 2509.2442333344525 2571.4367584450783 2855.7935887588405 2702.1480974329597 2485.2691700199875 2717.7721827107757 2960.953255693847 3534.1824292649294 2995.3075829521104 2506.456141180787 2401.2926535253328 1.0449556115747225 1.0708552140323078 1.1892734459359862 1.125288953625016 1.0349713794240651 1.1317954847031326 1.2330663867008786 1.4717833014132633 1.2473729841111643 1.043794531874765 1.0 11.229595524990348 -7.519956709652066 24.482969981139977 1.1609545190264052 1.097410911513071 0.11231867519359173 0.12265509421484186 282.13517797138525 2363944.3125997335 0.022916867491861597 0.03435370556458276 3.020252763316875e-08 7.519956709652066 -0.06354360751333421 (ac)AAPEEHDSPTEAS(ph)QPIVEEEETK ddPTM_A549_PD325901_60min_R1 1 AAPEEHDSPTEASQPIVEEEETK 23 0 Q9H0S4;Q9H0S4-2;F5H1N9 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 AAPEEHDS(0.295)PT(0.321)EAS(0.384)QPIVEEEETK 62.663000000000004 6.8412e-16 27438000.0 2681.4 2879.3 3117.0 2593.1 3183.6 2973.2 2760.8 3544.0 2573.5 2916.6 3623.1 True False 2953.6137540576483 3121.9487159042296 3328.538364043666 2753.2698976426104 2959.994918823768 2948.9872449613167 2865.863754767729 3473.312139785783 2465.344744587319 2732.4453782499304 3177.4816687232064 0.9295454897917589 0.9825229667363301 1.047539753512145 0.8664943451110277 0.9315537357649556 0.9280894596462913 0.9019292803408387 1.0931021802500118 0.7758800841730608 0.8599405639837717 1.0 11.633668086833813 -6.269682779949025 24.760863022510115 0.9104289858579052 0.9861347609844341 0.11240570193941457 0.08078679266867073 920.4719881916869 2764842.696762314 0.013590774447258251 0.03209085623982142 5.374242017375081e-07 6.269682779949025 0.07570577512652887 (ac)AAPRPS(ph)PAISVSVSAPAFYAPQKK ddPTM_A549_PD325901_60min_R1 1 AAPRPSPAISVSVSAPAFYAPQKK 24 2 Q15942;H0Y2Y8;C9IZ41 Q15942 ZYX Zyxin 1 AAPRPS(0.319)PAIS(0.319)VS(0.319)VS(0.043)APAFYAPQKK 44.105 4.6627e-05 3073900.0 1460.0 1616.1 1808.5 1565.5 2489.5 2331.4 2066.6 2154.1 2470.9 2133.9 2010.3 True False 1608.2181252048065 1752.2944187034443 1931.2356853939593 1662.1973794915382 2314.6461083087597 2312.413851373205 2145.245593886912 2111.13478564124 2367.0566657862096 1999.165189826347 1763.0458443416594 0.9121816828338533 0.9939017889564694 1.0953973157261283 0.9427987280229918 1.3128677939586273 1.3116016573220113 1.2167837840246123 1.1974361259049169 1.342595073964225 1.1339269459398869 1.0 10.783854274092983 -6.748853350778163 24.998869151548003 1.1924730990750676 0.994438377376094 0.5388577148181495 0.10087714111121925 220.43915364385504 437842.2187356498 0.019997990072778346 0.041407937904489225 1.7829807290346924e-07 6.748853350778163 -0.19803472169897363 (ac)AAQIPIVATTST(ph)PGIVR ddPTM_A549_PD325901_60min_R1 1 AAQIPIVATTSTPGIVR 17 0 K7ELX9;K7EQ79;K7ENM4;K7ENP7;Q6PI98;Q6PI98-3;Q6PI98-4 K7ELX9 INO80C INO80 complex subunit C 1 AAQIPIVAT(0.1)T(0.09)S(0.158)T(0.652)PGIVR 59.728 9.114299999999999e-05 1193400.0 606.18 581.34 568.08 715.56 800.26 679.32 564.13 670.59 494.04 736.62 847.85 True False 667.7189473538695 630.3315620129075 606.6333249425495 759.7585160453302 744.0524983471252 673.7878431478282 585.598275853781 657.2145563823216 473.27721687037894 690.1096874876444 743.5698249639729 0.8979909148225877 0.8477099807586302 0.8158390840724902 1.021771581548702 1.000649129869109 0.9061527519362076 0.7875498119926453 0.8838639416468583 0.6364933069914583 0.9281034064569272 1.0 9.538324414768343 -7.67611758938481 7.144008413200191 0.826323767381228 0.916871411943425 0.08312803993654083 0.10215525536911263 0.46457558630188883 32.99815892049108 0.021512881775394864 0.03192623346293835 2.1080572959791708e-08 7.67611758938481 0.090547644562197 (ac)AARDS(ph)DS(ph)EEDLVSYGTGLEPLEEGERPK ddPTM_A549_PD325901_60min_R1 2 AARDSDSEEDLVSYGTGLEPLEEGERPK 28 2 K7EQ19;Q9BRR8 K7EQ19 GPATCH1 G patch domain-containing protein 1 2 AARDS(0.992)DS(0.992)EEDLVS(0.007)Y(0.007)GT(0.001)GLEPLEEGERPK;AARDS(1)DS(1)EEDLVSYGTGLEPLEEGERPK 150.18 3.837599999999999e-67 32230000.0 3630.2 3807.6 3964.5 3680.8 5152.0 3613.0 3844.7 4409.9 4039.6000000000004 3834.2 4407.7 True False 3998.735231588005 4128.479814773362 4233.554810475175 3908.1546562966796 4790.141293435121 3583.57692588633 3991.0121624005646 4321.941085000375 3869.8296600874046 3592.107957651332 3865.580842712397 1.0344461529311015 1.0680102118564139 1.095192412921981 1.0110135618207403 1.239177626427282 0.9270474662668831 1.032448246406394 1.1180573530491111 1.0010991407366419 0.9292543873253535 1.0 11.916469494657008 -8.829206392486924 15.381085692735066 1.0005104885786005 1.0649672393186622 0.19770046876224956 0.07573310854717603 2.6400644661283263 597.4276583804799 0.011711641093016189 0.012466705057641697 1.4818137061767773e-09 8.829206392486924 0.06445675074006174 (ac)AARDS(ph)DSEEDLVSYGTGLEPLEEGERPK ddPTM_A549_MK2206_60min_R1 2 AARDSDSEEDLVSYGTGLEPLEEGERPK 28 2 K7EQ19;Q9BRR8 K7EQ19 GPATCH1 G patch domain-containing protein 1 1 AARDS(0.47)DS(0.47)EEDLVS(0.035)Y(0.021)GT(0.004)GLEPLEEGERPK;AARDS(0.482)DS(0.482)EEDLVS(0.027)Y(0.007)GT(0.002)GLEPLEEGERPK 44.931000000000004 6.8217e-10 16842600.0 3020.1000000000004 3172.0 2185.0 2732.2 3516.3 2806.12 2513.45 2808.2 3847.5 4223.3 3921.0 True False 3529.819045644129 3333.441251292571 2494.865855598764 3401.589122653118 2999.056928014444 3103.061755848296 2970.1113303762213 3206.270949751816 2976.04739319498 3269.2535967907656 2947.307485905223 1.1976419367591014 1.1310123790048843 0.8464898445546823 1.1541344562521507 1.0175582094357987 1.0528462912973722 1.0077371786215221 1.0878644203514638 1.009751241574623 1.1092339745429247 1.0 11.525181866077334 -5.537412692303486 24.987243605040867 1.015694448915695 1.1809846419925059 0.30812118029415436 0.0761339342902009 120.88119412851125 207823.1260783058 0.008563201677546562 0.03319104957347748 2.901264391116896e-06 5.537412692303486 0.16529019307681092 (ac)AARDS(ph)DSEEDLVSYGTGLEPLEEGERPK ddPTM_A549_PD325901_60min_R1 1 AARDSDSEEDLVSYGTGLEPLEEGERPK 28 2 K7EQ19;Q9BRR8 K7EQ19 GPATCH1 G patch domain-containing protein 1 1 AARDS(0.486)DS(0.486)EEDLVS(0.023)Y(0.005)GT(0.001)GLEPLEEGERPK 65.155 1.0435000000000003e-27 19844000.0 673.36 1149.0 1087.1 1152.4 1487.3 1233.4 957.39 1581.6 1209.6 1386.0 1310.2 True False 741.7190114985679 1245.8302624158505 1160.877143263353 1223.581130709708 1382.8371789064536 1223.355599332466 993.8240003539103 1550.0537472588026 1158.7647184973082 1298.4877234637606 1149.053706042104 0.645504215858984 1.0842228312435382 1.0102897167983336 1.0648598270696263 1.2034573942323485 1.064663551320237 0.864906483594331 1.3489828535499322 1.0084513129405008 1.1300496370499336 1.0 10.16623051487402 -5.257512572332332 24.177522390334186 1.0411473690069517 0.6455039675580925 0.48408102127076824 0.12312477986013982 157.78797612919354 971441.806455158 0.015640193947093314 0.1626511792101209 5.52697407750193e-06 5.257512572332332 -0.39564340144885923 (ac)AARDSDSEEDLVS(ph)YGTGLEPLEEGERPK ddPTM_A549_PD325901_60min_R1 1 AARDSDSEEDLVSYGTGLEPLEEGERPK 28 2 K7EQ19;Q9BRR8 K7EQ19 GPATCH1 G patch domain-containing protein 1 1 AARDS(0.233)DS(0.233)EEDLVS(0.275)Y(0.253)GT(0.006)GLEPLEEGERPK 47.018 4.9398e-15 13366000.0 982.17 1308.9 1314.0 1008.5 1091.7 1240.2 1030.3 952.04 1039.5 1107.8 1538.9 True False 1081.8791753646606 1419.2055965849493 1403.1759417238943 1070.7927545303205 1015.022758160543 1230.1002223869998 1069.5086303017933 933.0508153390682 995.8134299586245 1037.8533189416696 1349.6250558908519 0.8016146192918304 1.0515554600815922 1.0396783429585152 0.7934001742606346 0.7520775890534674 0.9114384895403732 0.7924487068712865 0.6913407625817869 0.7378445040065698 0.7689938138089842 1.0 10.398342947390963 -6.265875006819041 24.836828551650715 0.8437611390259353 0.9730100726305475 0.25980654729815333 0.10557064681875464 467.43735723388437 2617375.7077695956 0.01803972048440712 0.04331335099738647 5.42156904737734e-07 6.265875006819041 0.1292489336046122 (ac)AAS(ph)DTERDGLAPEK ddPTM_A549_MK2206_60min_R1 2 AASDTERDGLAPEK 14 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 AAS(0.905)DT(0.095)ERDGLAPEK;AAS(0.997)DT(0.003)ERDGLAPEK 91.936 3.8472e-09 66932000.0 5949.799999999999 6602.0 5988.5 5222.8 7441.299999999999 4914.5 4507.47 5715.1 7960.4 7615.2 9329.099999999999 True False 6953.98078135606 6938.01360057804 6837.759348399632 6502.386234460405 6346.6946274305055 5434.54912801892 5326.418953363272 6525.232926759708 6157.382110146669 5894.921031013905 7012.426999938388 0.9916653366112986 0.989388353082178 0.9750916977046191 0.9272661568551852 0.9050639140323697 0.7749883354317512 0.759568542162374 0.9305241861080393 0.8780671955944452 0.8406392011019436 1.0 12.775698131863011 -6.2639332719141265 2.7282237835287853 0.9112963441628065 0.9893032463806446 0.22860120615415525 0.07135843696893661 0.45787019121801203 6.735749748805575 0.012229991922332867 0.035146929928463834 5.445863205211781e-07 6.2639332719141265 0.07800690221783813 (ac)AAS(ph)DTERDGLAPEK ddPTM_A549_PD325901_60min_R1 2 AASDTERDGLAPEK 14 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 AAS(0.997)DT(0.003)ERDGLAPEK;AAS(0.953)DT(0.047)ERDGLAPEK 104.32 3.783e-23 97587000.0 7993.3 7870.3 7155.2 7612.6 9165.4 8413.6 9028.3 9614.4 8522.5 8149.0 9716.8 True False 8804.773931643553 8533.557801820254 7640.794899712939 8082.8130125310045 8521.653922913474 8345.082431120194 9371.87689697533 9422.63324964911 8164.328962792089 7634.470749282957 8521.69519987018 1.033218593851806 1.0013920472009201 0.8966285135179839 0.9484982533351037 0.9999951562505184 0.9792749253983318 1.0997667338674704 1.1057228671817145 0.9580639498719064 0.8958863899989359 1.0 13.056924735438985 -6.7847596493161335 23.251108474423084 0.9996960636459638 0.9669452068733997 0.06148735145506967 0.06399302755724011 257.93498516908954 257169.51648016856 0.009000368511240635 0.01701950560885536 1.6414979726436491e-07 6.7847596493161335 -0.03275085677256406 (ac)AAS(ph)PGSGSANPR ddPTM_A549_MK2206_60min_R1 1 AASPGSGSANPR 12 0 Q6UUV7;Q6UUV7-3;H0YK33 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 AAS(0.993)PGS(0.006)GSANPR 45.368 0.015927 1097300.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AAS(ph)PGSGSANPR ddPTM_A549_PD325901_60min_R1 2 AASPGSGSANPR 12 0 Q6UUV7;Q6UUV7-3;H0YK33 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 AAS(1)PGSGSANPR;AAS(0.999)PGS(0.001)GSANPR 82.749 8.157100000000001e-05 4643800.0 269.33000000000004 106.38 92.071 153.27 213.65 131.71 0.0 121.45 0.0 211.31 218.82 True False 296.6721833297332 115.34501594064248 98.31949172790006 162.73713979857428 198.64396105248704 130.63739742831132 0.0 119.02758447431813 0.0 197.96785053760982 191.9065272142674 1.5459202333357471 0.6010479039717993 0.5123301075534779 0.8480021089479414 1.0351078930770143 0.6807345186464246 0.0 0.620237290529579 0.0 1.031584768956685 1.0 7.584259971758819 -5.261559061738057 5.101899791970118 0.5545386682823834 1.5918042976950535 0.33605359347860386 0.3542137111768321 0.15030991922879985 12.63827729042408 0.05620112187554532 0.5462352845845564 5.475716290709506e-06 5.261559061738057 1.03726562941267 (ac)AASAAAASAAAASAASGS(ph)PGPGEGSAGGEK ddPTM_A549_MK2206_60min_R1 2 AASAAAASAAAASAASGSPGPGEGSAGGEK 30 0 Q13263;Q13263-2 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAASAAAASAAS(0.056)GS(0.943)PGPGEGSAGGEK;AASAAAASAAAASAAS(0.012)GS(0.988)PGPGEGSAGGEK 92.91 3.5615e-48 27290000.0 4744.700000000001 5456.8 4513.7 4175.8 7038.9 6104.7 5852.0 6401.6 7480.5 6575.200000000001 6495.2 True False 5545.489363222309 5734.527812122728 5153.810531998233 5198.871187458788 6003.487134374449 6750.6953020281 6915.232650485056 7309.046404077782 5786.178693903841 5089.857753325274 4882.262581599494 1.135844144090573 1.1745635791354796 1.0556192842683558 1.0648487459590035 1.229652652645247 1.3826981218647363 1.4163991663511744 1.4970613075225547 1.185142871198913 1.0425202799431916 1.0 12.253334174001576 -9.971425084987827 1.1491211917208333 1.0281696647675376 1.2379168336900674 0.2705671011926517 0.13582468193623679 0.4488921030578864 1.1949598511259192 0.049624202788554304 0.028779698631570975 1.06800900627115e-10 9.971425084987827 0.20974716892252987 (ac)AASAAAASAAAASAASGS(ph)PGPGEGSAGGEKR ddPTM_A549_MK2206_60min_R1 2 AASAAAASAAAASAASGSPGPGEGSAGGEKR 31 1 Q13263;Q13263-2 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAASAAAASAAS(0.045)GS(0.953)PGPGEGS(0.002)AGGEKR;AASAAAASAAAASAAS(0.002)GS(0.998)PGPGEGSAGGEKR 144.59 1.5665999999999994e-121 277040000.0 3931.9 4506.799999999999 2928.5 4121.6 5630.3 3858.0 3384.6 2950.3999999999996 5704.0 5204.3 6499.0 True False 4595.508594274414 4736.176869900805 3343.805335524477 5131.392185025653 4802.090328413313 4266.250999266863 3999.538009027978 3368.62823522105 4412.053107416289 4028.645015456677 4885.118936724831 0.9407158052441231 0.969511066413486 0.684488009163251 1.0504129482804228 0.9830037693274294 0.8733156867879904 0.8187186557446277 0.6895693388131725 0.9031618604508935 0.824676956208897 1.0 12.254177972205646 -10.036441063783544 1.176787338225013 0.9859361162390758 0.8796252166303922 0.0 0.11934643001033836 0.6268777264850824 1.7433722894004768 0.036143644476980465 0.02033207151671057 9.195152497552814e-11 10.036441063783544 -0.10631089960868367 (ac)AASAAAASAAAASAASGS(ph)PGPGEGSAGGEKR ddPTM_A549_PD325901_60min_R1 2 AASAAAASAAAASAASGSPGPGEGSAGGEKR 31 1 Q13263;Q13263-2 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAASAAAASAASGS(1)PGPGEGSAGGEKR;AASAAAASAAAASAASGS(1)PGPGEGSAGGEKR 253.26 4.996499999999997e-298 289730000.0 6709.4 7564.7 6323.1 7454.4 8511.3 7034.8 6709.799999999999 7221.7 7595.8 7989.8 9372.0 True False 7390.533348800769 8202.203817316962 6752.223589889156 7914.841357829262 7913.495650390983 6977.510921180503 6965.145110743447 7077.657528185948 7276.574941106029 7485.322664452205 8219.3034140029 0.8991678462933748 0.9979195807935737 0.8215080098376295 0.9629576813462151 0.9627939561044889 0.8489175505181128 0.8474130665230349 0.8611018685753862 0.8853031181096463 0.9107003705082549 1.0 13.00480041533941 -10.681950633927293 0.9851261529211652 0.9989752666356955 0.8989845441517305 0.052760087204976824 0.058694202328591905 0.5025615680989388 0.8809500329669332 0.034233773986057904 0.009410647068978028 2.0799330987952767e-11 10.681950633927293 -0.09999072248396501 (ac)AASDTERDGLAPEKT(ph)SPDRDK ddPTM_A549_MK2206_60min_R1 3 AASDTERDGLAPEKTSPDRDK 21 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 AAS(0.051)DT(0.263)ERDGLAPEKT(0.343)S(0.343)PDRDK;AAS(0.008)DT(0.043)ERDGLAPEKT(0.474)S(0.474)PDRDK;AASDTERDGLAPEKT(0.5)S(0.5)PDRDK 64.574 1.3251e-15 109485000.0 11120.6 13136.7 11845.9 9823.8 12159.0 8534.4 8580.0 8927.5 16715.5 18618.4 20246.7 True False 12997.485407433558 13805.301918617615 13525.826745463346 12230.631441007146 10370.427206929908 9437.504543323772 10138.8749386811 10193.000464322105 12929.465939168473 14412.490508959629 15218.885609507082 0.8540366056312403 0.9071164783572316 0.8887527702431708 0.8036482929713852 0.6814183030886051 0.62011797614329 0.6662035052256026 0.669759976246529 0.8495671937432506 0.9470135250872963 1.0 13.893575102090086 -9.61267445207042 1.1295158631273319 0.9693738427543434 0.7649885203318733 0.4077199247929527 0.09480827761746825 0.3193536325943999 0.8405979296993333 0.030453363364912223 0.021535287373457054 2.43963889084754e-10 9.61267445207042 -0.2043853224224701 (ac)AASDTERDGLAPEKT(ph)SPDRDK ddPTM_A549_PD325901_60min_R1 4 AASDTERDGLAPEKTSPDRDK 21 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 AAS(0.004)DT(0.012)ERDGLAPEKT(0.492)S(0.492)PDRDK;AASDT(0.001)ERDGLAPEKT(0.56)S(0.439)PDRDK;AAS(0.002)DT(0.002)ERDGLAPEKT(0.498)S(0.498)PDRDK;AASDT(0.002)ERDGLAPEKT(0.534)S(0.463)PDRDK 55.67 2.7545e-10 167079000.0 16411.3 16027.8 15691.599999999999 18225.0 19822.5 24095.699999999997 18372.7 20521.1 23490.1 20929.3 20755.7 True False 18077.363094639473 17378.518955568998 16756.5263372562 19350.71685802189 18430.235983912582 23899.472608103864 19071.883152427195 20111.79056200847 22502.892786023156 19607.820426183316 18202.880481222783 0.9931045316309808 0.9547125782370457 0.9205425676744639 1.0630579527225463 1.0124900838042818 1.3129500373722396 1.0477398438176218 1.1048685719139248 1.2362270251258343 1.0771822869688015 1.0 14.151879144652327 -6.661457131376895 2.025723818090675 1.1202683387560441 0.9595377993567571 0.3805132889590185 0.08816208150368346 0.30859992712517126 2.5605727031539893 0.015528413022298165 0.0379537688582719 2.1804336142278474e-07 6.661457131376895 -0.16073053939928705 (ac)AASEAAVVSS(ph)PSLK ddPTM_A549_MK2206_60min_R1 2 AASEAAVVSSPSLK 14 0 Q8WWH5 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 1 AASEAAVVS(0.199)S(0.79)PS(0.011)LK;AASEAAVVS(0.132)S(0.847)PS(0.02)LK 103.85 9.974099999999999e-32 8086100.0 1958.71 2590.6000000000004 2143.33 1544.66 2572.9 2468.2 2196.56 2165.6 3487.7 3051.1 3328.0 True False 2289.2923621382115 2722.4504746527514 2447.2864230116684 1923.1017693424212 2194.429818300021 2729.38328574144 2595.6465192668243 2472.5804318718515 2697.7415187124443 2361.8543909190207 2501.5657518726316 0.9151437896143583 1.0882985876404685 0.9783018580181909 0.7687592332533408 0.8772225221972704 1.091069976353117 1.0376087525677729 0.9884131288657585 1.0784211914849564 0.9441504342434233 1.0 11.288615657701838 -7.260729232138249 24.99957225851962 1.0372683104559173 0.9288076472049169 0.25275093960650474 0.08167855730047419 65.79898740826135 2316325.572803812 0.01218165813709743 0.020336765580457394 5.48618903572657e-08 7.260729232138249 -0.10846066325100034 (ac)AAT(ph)DLERFSNAEPEPR ddPTM_A549_PD325901_60min_R1 1 AATDLERFSNAEPEPR 16 1 A0A087X142;A6NMH6;A6NFQ9;F8W8I8;Q92599-2;Q92599-4;Q92599 A0A087X142 SEPT8 Septin-8 1 AAT(0.743)DLERFS(0.257)NAEPEPR 69.01 1.6722e-07 7532100.0 0.0 0.0 0.0 0.0 0.0 138.48 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 137.35226479289764 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AATDLERFS(ph)NAEPEPR ddPTM_A549_PD325901_60min_R1 1 AATDLERFSNAEPEPR 16 1 A0A087X142;A6NMH6;A6NFQ9;F8W8I8;Q92599-2;Q92599-4;Q92599 A0A087X142 SEPT8 Septin-8 1 AAT(0.153)DLERFS(0.847)NAEPEPR 48.70399999999999 8.3621e-05 5785800.0 0.0 0.0 0.0 0.0 139.76 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 129.94373974582533 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AAVDS(ph)DVESLPR ddPTM_A549_MK2206_60min_R1 2 AAVDSDVESLPR 12 0 Q9H6E5;F8WA97;J3KN81;H3BRB1 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase 1 AAVDS(0.997)DVES(0.003)LPR;AAVDS(0.994)DVES(0.006)LPR 46.592 0.0044348 789040.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AAVDS(ph)DVESLPR ddPTM_A549_PD325901_60min_R1 2 AAVDSDVESLPR 12 0 Q9H6E5;F8WA97;J3KN81;H3BRB1 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase 1 AAVDS(0.997)DVES(0.003)LPR;AAVDS(0.996)DVES(0.004)LPR 46.592 0.0044348 1440970.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ACS(ph)PDAVVSPSSAFLR ddPTM_A549_MK2206_60min_R1 2 ACSPDAVVSPSSAFLR 16 0 Q93100-4;Q93100-2;I3L3F2;H3BV13;H3BQ89 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 ACS(1)PDAVVSPSSAFLR;ACS(1)PDAVVSPSSAFLR 67.456 4.2319e-06 7638900.0 912.3900000000001 897.44 744.22 690.86 1324.86 1335.8200000000002 1230.01 1122.87 1693.02 1299.8600000000001 1374.57 True False 1066.379126206168 943.1158627238344 849.7615867522708 860.1207310138836 1129.9748490314291 1477.1755857544488 1453.4868954926726 1282.040261145154 1309.553673197392 1006.2207232080227 1033.2263327979456 1.032086670999224 0.9127872885023219 0.8224350849161405 0.8324611014168626 1.0936372923940987 1.4296728014609366 1.406745888441184 1.2408126084760422 1.2674412484737594 0.9738628326314599 1.0 10.012940602213309 -6.908106633943393 5.232470898139576 1.1839814405432656 0.8974230442752351 0.5104943739940604 0.1437209994758017 0.16554132369138516 7.440417810030837 0.024099531233374473 0.046194100138588046 1.2356440039156078e-07 6.908106633943393 -0.2865583962680305 (ac)ADANKAEVPGAT(ph)GGDSPHLQPAEPPGEPR ddPTM_A549_MK2206_60min_R1 1 ADANKAEVPGATGGDSPHLQPAEPPGEPR 29 1 A0A087WWC8;A0A0A0MQW0;A0A0A0MR39;Q9P2K5-4;Q9P2K5-2;Q9P2K5 A0A087WWC8 MYEF2 Myelin expression factor 2 1 ADANKAEVPGAT(0.5)GGDS(0.5)PHLQPAEPPGEPR 52.824 2.2041e-21 205780000.0 933.94 1016.6 1116.8 811.48 2018.4 1064.7 904.19 1059.4 1387.7 1938.1 1741.2 True False 1091.5662393592518 1068.3405977503235 1275.179033195743 1010.2926364287214 1721.4960337583123 1177.3658473093383 1068.469618975065 1209.5731942764316 1073.3881657015397 1500.281863931092 1308.8119853247074 0.8340130221900753 0.8162674316321114 0.9743026863246363 0.771915789094852 1.3153119417157697 0.8995683570373493 0.8163660105160062 0.9241764346896203 0.8201240344198402 1.146292882975764 1.0 10.354042149461284 -5.747148828495028 24.532424029448837 0.9265749132936749 0.8251401406152067 0.0697098775752637 0.1523606532400078 403.3469562705802 692405.2744020827 0.01863806395776226 0.07145968971672077 1.7899923359537767e-06 5.747148828495028 -0.10143477267846823 (ac)ADANKAEVPGATGGDS(ph)PHLQPAEPPGEPR ddPTM_A549_MK2206_60min_R1 1 ADANKAEVPGATGGDSPHLQPAEPPGEPR 29 1 A0A087WWC8;A0A0A0MQW0;A0A0A0MR39;Q9P2K5-4;Q9P2K5-2;Q9P2K5 A0A087WWC8 MYEF2 Myelin expression factor 2 1 ADANKAEVPGAT(0.033)GGDS(0.967)PHLQPAEPPGEPR 66.1 5.563899999999998e-67 201580000.0 1845.5 2062.2 1752.1 1584.7 2262.5 1700.2 1488.9 1481.5 2951.6 3219.6 2571.3 True False 2156.9752818569723 2167.1571716316307 2000.5741261302494 1972.9515711398863 1929.689247115628 1880.1140354985798 1759.4138573662337 1691.507161903466 2283.0673127366604 2492.2901238906866 1932.7752457301965 1.1159990209011983 1.1212670363091728 1.0350785123877342 1.0207868584298385 0.9984033329165478 0.9727535778679112 0.910304424300267 0.8751701293982684 1.181237869110914 1.289487812613777 1.0 10.916458167052067 -2.1711179794152913 0.8964515567822388 1.0422953023417332 34.12996715915707 0.0543708026972366 0.11211562576333838 1442.2164212481443 4.34394905600184 0.016191053374431903 97335.68153211699 0.006743448118909413 2.1711179794152913 33.087671856815334 (ac)ADANKAEVPGATGGDS(ph)PHLQPAEPPGEPR ddPTM_A549_PD325901_60min_R1 2 ADANKAEVPGATGGDSPHLQPAEPPGEPR 29 1 A0A087WWC8;A0A0A0MQW0;A0A0A0MR39;Q9P2K5-4;Q9P2K5-2;Q9P2K5 A0A087WWC8 MYEF2 Myelin expression factor 2 1 ADANKAEVPGAT(0.055)GGDS(0.945)PHLQPAEPPGEPR;ADANKAEVPGAT(0.049)GGDS(0.951)PHLQPAEPPGEPR 78.22 9.646199999999999e-121 544170000.0 6356.8 7957.7 6657.0 7304.6 8431.6 8498.5 7507.1 8171.6 8286.0 8722.1 8857.8 True False 7002.137656371175 8628.323306550577 7108.784051792969 7755.788552049753 7839.393503440902 8429.29103366869 7792.786798542747 8008.611027503813 7937.768235341189 8171.385117477099 7768.346754220533 0.9013678042328533 1.1107026474922506 0.9150961300653547 0.9983834137985722 1.0091456717198894 1.0850817169160305 1.0031461062559979 1.030928623667931 1.0218092068339522 1.051882128335427 1.0 12.923391884161363 -6.6992938407313805 4.200617472091066 1.0173012378777022 0.9848571806467695 0.12459717795791436 0.055833750635802856 0.4579461052452053 16.13832122059296 0.0071073411451373315 0.015026725833491867 1.998509234158883e-07 6.6992938407313805 -0.03244405723093269 (ac)ADDKVAILT(ph)DDEEEQK ddPTM_A549_MK2206_60min_R1 2 ADDKVAILTDDEEEQK 16 1 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 ADDKVAILT(1)DDEEEQK;ADDKVAILT(1)DDEEEQK 61.732 1.5805000000000002e-06 2855000.0 1018.48 1172.7 1123.7 1004.63 1549.9 1366.9 1085.13 1686.9 1657.48 1578.97 1624.5 True False 1190.374524554694 1232.3854209933154 1283.0575569502653 1250.764395099554 1321.9117631401157 1511.5444507252146 1282.2840748497697 1926.0232409145856 1282.0634264516734 1222.2795803577096 1221.0918160808556 0.97484440471909 1.0092487761884337 1.0507461765391986 1.0243000392173078 1.0825654105052034 1.2378630589602826 1.0501127416980922 1.5772960030935563 1.0499320440673403 1.000972706770459 1.0 10.253955967890228 -6.748284220835131 4.928188101609278 1.0887408650765278 1.0160297852887237 0.07028723835410067 0.16024523963382978 0.6032025814955464 38.52886830398743 0.024582514414826964 0.05032071497306285 1.7853188036634965e-07 6.748284220835131 -0.07271107978780411 (ac)ADDKVAILT(ph)DDEEEQKR ddPTM_A549_MK2206_60min_R1 2 ADDKVAILTDDEEEQKR 17 2 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 ADDKVAILT(1)DDEEEQKR;ADDKVAILT(1)DDEEEQKR 71.535 3.4462e-13 10483100.0 3239.1 3334.0 3449.9 2880.2 4444.1 3394.6000000000004 2599.6 3530.9 5024.9 3988.6 4124.299999999999 True False 3785.780891608191 3503.686359334625 3939.147695757517 3585.849129297093 3790.378777063674 3753.8143188468907 3071.91367023256 4031.415887927741 3886.7681731164266 3087.5724897969935 3100.1224851106626 1.2211713923532452 1.1301767514548886 1.270642600309034 1.1566798236260951 1.2226545226094097 1.2108600021050115 0.9909007418211427 1.300405357301176 1.2537466476837233 0.9959517743657083 1.0 11.59810950182961 -10.858236638101326 1.0816032130727729 0.9989128802770011 1.1967196661166128 0.4744521717778203 0.07971441227179284 0.36858286700840737 0.7588388461667519 0.055440374849065485 0.01319688870738876 1.386000420059096e-11 10.858236638101326 0.19780678583961175 (ac)ADDKVAILT(ph)DDEEEQKR ddPTM_A549_PD325901_60min_R1 2 ADDKVAILTDDEEEQKR 17 2 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 ADDKVAILT(1)DDEEEQKR;ADDKVAILT(1)DDEEEQKR 67.86399999999999 3.7523e-09 19483200.0 7462.2 7459.4 7225.599999999999 7740.1 9491.1 8901.8 8417.099999999999 8795.3 9389.2 9441.3 9870.7 True False 8219.757050618706 8088.02981676658 7715.972667062529 8218.18839795749 8824.477878517477 8829.306692182388 8737.417346513856 8619.870841720624 8994.604575822521 8845.174706737665 8656.666475522668 0.9495291373256259 0.9343122828673198 0.8913330193417965 0.9493479298520966 1.0193852221833088 1.0199430366351612 1.0093281716720306 0.9957494453660555 1.0390379023213376 1.0217760764779396 1.0 13.079595860989107 -6.6706644756637505 4.006571216361919 1.0166296717263832 0.9252530795131408 0.8501490582460698 0.01710521770106461 0.06662298803021857 2.0131721705529966 0.002807389047203652 0.006005508146790054 2.1346934835075508e-07 6.6706644756637505 -0.09137659221324235 (ac)ADDKVAILT(ph)DDEEEQKRK ddPTM_A549_MK2206_60min_R1 2 ADDKVAILTDDEEEQKRK 18 3 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 ADDKVAILT(1)DDEEEQKRK;ADDKVAILT(1)DDEEEQKRK 114.72 4.428499999999999e-31 110168000.0 4642.8 5140.1 5605.0 4863.1 6249.8 4385.2 4556.6 4264.1 7236.1 7883.9 7336.6 True False 5426.3911344381195 5401.709134857799 6399.873281753352 6054.559718312852 5330.462699059997 4849.238953339826 5384.475238414251 4868.549233258571 5597.134903677245 6102.921514393649 5514.719740140849 0.9839831197477183 0.9795074617372733 1.160507438876648 1.097890736720959 0.966588140510628 0.8793264538980858 0.9763823897017708 0.8828280425242834 1.0149445787673501 1.1066603203733751 1.0 12.429071854108326 -6.772957669527691 24.99126043262776 0.9831329659026042 1.0575486578873705 0.20588991764150022 0.07473709871563863 266.61438512424655 578474.7748466498 0.010143476820996278 0.019288398328104032 1.6867174209049804e-07 6.772957669527691 0.07441569198476627 (ac)ADDKVAILT(ph)DDEEEQKRK ddPTM_A549_PD325901_60min_R1 2 ADDKVAILTDDEEEQKRK 18 3 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 ADDKVAILT(1)DDEEEQKRK;ADDKVAILT(1)DDEEEQKRK 125.28 8.230600000000001e-57 231310000.0 3867.5 4062.3 3838.3 3591.0 4992.299999999999 4585.9 4418.4 5129.0 4943.0 4763.8 5306.4 True False 4260.125752896977 4404.6442776430895 4098.790119572922 3812.8079142472784 4641.658070500028 4548.553950850298 4586.544629841252 5026.6980713773355 4735.262899745532 4463.012855004807 4653.7464400410745 0.9154185359654826 0.9464727686376083 0.8807506322877242 0.8192985938042697 0.9974024434513583 0.977396170903147 0.9855596322090918 1.080140084153998 1.0175163087965184 0.9590150457284938 1.0 12.184176892126294 -6.879111632056581 7.915950898970997 1.0096832698242462 0.8940452610091628 0.6332208984847175 0.040795437122363505 0.1064586071055659 6.965767388974683 0.005569244343104935 0.010560655195369669 1.3209560489511407e-07 6.879111632056581 -0.11563800881508335 (ac)ADDQGCIEEQGVEDS(ph)ANEDSVDAKPDR ddPTM_A549_MK2206_60min_R1 1 ADDQGCIEEQGVEDSANEDSVDAKPDR 27 1 Q5SVL2;P55210-2;P55210 Q5SVL2 CASP7 Caspase-7;Caspase-7 subunit p20;Caspase-7 subunit p11 1 ADDQGCIEEQGVEDS(1)ANEDSVDAKPDR 76.859 3.8768e-07 4685900.0 0.0 0.0 244.55 0.0 0.0 0.0 159.08 138.3 139.29 0.0 0.0 True False 0.0 0.0 279.23086727079084 0.0 0.0 0.0 187.98277683512694 157.9044485259868 107.74103740042328 0.0 0.0 0.0 (ac)ADDQGCIEEQGVEDS(ph)ANEDSVDAKPDR ddPTM_A549_PD325901_60min_R1 2 ADDQGCIEEQGVEDSANEDSVDAKPDR 27 1 Q5SVL2;P55210-2;P55210 Q5SVL2 CASP7 Caspase-7;Caspase-7 subunit p20;Caspase-7 subunit p11 1 ADDQGCIEEQGVEDS(0.978)ANEDS(0.022)VDAKPDR;ADDQGCIEEQGVEDS(0.992)ANEDS(0.008)VDAKPDR 79.898 3.8369e-18 8271200.0 0.0 147.57 396.16999999999996 148.11 0.0 0.0 0.0 175.44 0.0 0.0 0.0 True False 0.0 160.00624179696007 423.05647856374054 157.2584183177845 0.0 0.0 0.0 171.94071156998248 0.0 0.0 0.0 0.0 (ac)ADEAALALQPGGS(ph)PSAAGADR ddPTM_A549_MK2206_60min_R1 2 ADEAALALQPGGSPSAAGADR 21 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 ADEAALALQPGGS(0.847)PS(0.153)AAGADR;ADEAALALQPGGS(0.848)PS(0.152)AAGADR 69.361 2.4749e-18 110826000.0 674.28 598.12 904.6300000000001 543.5 1347.03 884.79 981.28 553.46 1083.87 1206.49 1146.46 True False 788.0819794367482 628.5617532229227 1032.9201368193637 676.6575243986418 1148.8836713998514 978.4178905239315 1159.5658741059424 631.9146499001637 838.3751755847284 933.9430710563046 861.7623413136706 0.9145003693656373 0.729391066526234 1.1986136865122003 0.7852020121547026 1.3331792494535013 1.135368585534187 1.345575013568474 0.7332818105475263 0.9728612349278447 1.083759438399921 1.0 9.751146244376308 -5.746445654509091 24.98287517590507 1.023962843468549 0.8219457321240017 0.16676470363513451 0.19243880003428865 337.3414271318444 562075.9989621901 0.024719214088395614 0.0949696326709273 1.7928928921911007e-06 5.746445654509091 -0.20201711134454736 (ac)ADEAALALQPGGS(ph)PSAAGADR ddPTM_A549_PD325901_60min_R1 2 ADEAALALQPGGSPSAAGADR 21 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 ADEAALALQPGGS(0.852)PS(0.148)AAGADR;ADEAALALQPGGS(0.871)PS(0.129)AAGADR 93.37100000000001 1.4246e-22 108166000.0 547.27 625.99 131.85 788.2 967.8100000000001 946.4100000000001 781.28 771.5 503.61 908.6300000000001 910.25 True False 602.8284475211198 678.7443742120959 140.79813387845925 836.8853238679209 899.8343643632455 938.7027507412356 811.0120379328204 756.111827269958 482.4450230509501 851.2589467322346 798.2950205501645 0.7551449426625082 0.8502425253063994 0.17637355896498613 1.0483409044580547 1.1271952613998553 1.175884512087155 1.015930222606038 0.9471583910781067 0.6043442720192108 1.0663463065892214 1.0 9.64077820192079 (ac)ADEAALALQPGGS(ph)PSAAGADREAASSPAGEPLR ddPTM_A549_MK2206_60min_R1 2 ADEAALALQPGGSPSAAGADREAASSPAGEPLR 33 1 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 ADEAALALQPGGS(0.803)PS(0.191)AAGADREAAS(0.003)S(0.003)PAGEPLR;ADEAALALQPGGS(0.881)PS(0.119)AAGADREAASSPAGEPLR 132.08 1.1946999999999997e-76 38212000.0 1671.25 1178.39 1377.0300000000002 1353.76 1871.35 1312.51 1199.72 1687.24 2170.76 1959.75 2232.4 True False 1953.3161418604514 1238.365017689361 1572.3135602449272 1685.4312607725967 1596.0768939623551 1451.398937026374 1417.6935945727841 1926.4114369557908 1679.0863259914063 1517.0411138945135 1678.0334688943692 1.1640507642243045 0.7379858868400884 0.9369977353794384 1.0044086080613766 0.9511591535858852 0.8649403983477628 0.8448541825014259 1.1480172908738668 1.0006274350998081 0.9040589130168356 1.0 10.712555775723729 -8.233878041134107 24.993771145448115 1.011383668076509 0.9234108546276403 0.11237913000484201 0.11274580935046039 1080.9067181335017 980212.5424432773 0.01594371015901796 0.020580721406857676 5.8360897072429686e-09 8.233878041134107 -0.08797281344886865 (ac)ADEAALALQPGGS(ph)PSAAGADREAASSPAGEPLRK ddPTM_A549_MK2206_60min_R1 2 ADEAALALQPGGSPSAAGADREAASSPAGEPLRK 34 2 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 ADEAALALQPGGS(0.704)PS(0.194)AAGADREAAS(0.051)S(0.051)PAGEPLRK;ADEAALALQPGGS(0.887)PS(0.067)AAGADREAAS(0.023)S(0.023)PAGEPLRK 42.782 2.3651999999999996e-09 39407000.0 976.34 1146.53 1179.49 1168.32 2078.83 1201.87 1015.3199999999999 1304.74 1750.84 1636.6100000000001 1546.1399999999999 True False 1141.1223227787789 1204.8834797744232 1346.759417858209 1454.558452447878 1773.0368608094489 1329.051085663262 1199.790501485046 1489.6908905986688 1354.2775355169579 1266.8986643249898 1162.190766706836 0.9818717851392363 1.0367346861553208 1.1588109770260553 1.2515660028598317 1.525598818715017 1.143573949937013 1.032352463859915 1.2817954962934628 1.1652798957906159 1.0900952757651416 1.0 10.182631182658374 -10.386144626312626 0.7494571498434678 0.9991357741722877 1.1814976796643866 0.09717160349375442 0.14327539966442737 0.9767574198132787 0.9965191120812441 0.09946230400870368 0.029707380275702116 4.110128251257604e-11 10.386144626312626 0.18236190549209885 (ac)ADEGKSYS(ph)EHDDER ddPTM_A549_MK2206_60min_R1 2 ADEGKSYSEHDDER 14 1 Q9UBU9-2;Q9UBU9;E9PQA4 Q9UBU9-2 NXF1 Nuclear RNA export factor 1 1 ADEGKS(0.035)Y(0.001)S(0.964)EHDDER;ADEGKS(0.152)YS(0.848)EHDDER 57.525 0.00070762 8945400.0 1424.52 1589.39 1529.58 1263.31 2134.1 1536.26 1558.6599999999999 1253.11 2279.06 2618.8 2920.1 True False 1664.9441498297983 1670.2831621664245 1746.4974441220863 1572.821006712141 1820.176717025176 1698.8260135131457 1841.848346378167 1430.7421799884262 1762.8565489109674 2027.2112611644093 2194.958579339926 0.7585310107904109 0.7609634085526646 0.7956858323255002 0.7165606775072376 0.8292533326859155 0.773967230864111 0.8391266986605518 0.6518310611668503 0.8031388680879338 0.9235760894285476 1.0 11.099977999846542 -10.295400404145916 0.6985718064819059 1.0025347103594846 0.7679478193850513 0.6394697265945332 0.0543939209338498 0.26833989537277436 0.24061152628275134 0.03343776778867871 0.01031632639143281 5.065234961898446e-11 10.295400404145916 -0.2345868909744333 (ac)ADELS(ph)EK ddPTM_A549_MK2206_60min_R1 2 ADELSEK 7 0 C9JKI3;Q03135-2 C9JKI3 CAV1 Caveolin;Caveolin-1 1 ADELS(1)EK;ADELS(1)EK 69.423 0.0039893 68505000.0 330.06 229.64 151.76 222.54 362.87 431.53 385.99 366.74 535.05 239.13 371.68 True False 385.7660588077551 241.32769512825516 173.28184999801758 277.0623099902002 309.4923036909823 477.1942181735689 456.11938666451215 418.72651809414583 413.8620292992782 185.1103669170022 279.38159815385194 1.3807854968147135 0.8637923783203467 0.6202335842555866 0.9916984934620693 1.1077762663543387 1.7080373987651973 1.6326035418171418 1.498761983112282 1.4813503539033004 0.6625717947789255 1.0 8.126093188594828 -7.011391503787989 8.504612317488094 1.3226066849885902 0.9463003558350681 0.22158582291617035 0.3225770718084567 0.1825019835761011 102.6338097919442 0.0450614568396535 0.0813519826198365 9.741111090857029e-08 7.011391503787989 -0.37630632915352213 (ac)ADELS(ph)EK ddPTM_A549_PD325901_60min_R1 2 ADELSEK 7 0 C9JKI3;Q03135-2 C9JKI3 CAV1 Caveolin;Caveolin-1 1 ADELS(1)EK;ADELS(1)EK 66.62100000000001 0.0041249 85571000.0 703.6 574.59 810.8399999999999 808.75 780.63 660.38 579.04 485.28999999999996 662.3299999999999 743.39 771.3499999999999 True False 775.0289540370563 623.0127158237807 865.8684783770182 858.7046506954842 725.8012418273012 655.0020842282909 601.0756840628461 475.6105102473601 634.4945734146181 696.4522285322689 676.4788399905182 1.1456810002333842 0.9209640848965994 1.2799638764593946 1.2693739994994082 1.0729104872481663 0.968252139619728 0.8885358248179219 0.7030678302576714 0.9379370586425312 1.0295255185543286 1.0 9.40190099771167 -7.172772868006609 3.3166964957428346 0.9401208140389183 1.1478931105087837 0.4551141833629837 0.11898421001772588 0.20765238331929317 4.392963242977858 0.018500481140669312 0.03312158856561115 6.71780095840418e-08 7.172772868006609 0.2077722964698654 (ac)ADELS(ph)EKQVYDAHTK ddPTM_A549_MK2206_60min_R1 11 ADELSEKQVYDAHTK 15 1 C9JKI3;Q03135-2 C9JKI3 CAV1 Caveolin;Caveolin-1 1 ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(0.865)EKQVY(0.134)DAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK 169.61 5.918899999999999e-124 3753188100.0 51985.0 64842.899999999994 55895.30000000001 51689.40000000001 64526.799999999996 47121.6 42277.100000000006 43509.0 75968.9 83371.7 84967.3 True False 60758.79708877518 68143.12664358097 63822.09403132708 64353.30532042539 55034.99319813507 52107.97643521343 49958.30182635366 49676.533990724194 58762.06544740487 64537.97506583959 63867.57443181707 0.9513246374126715 1.0669440204955385 0.9992878952912397 1.007605281599145 0.8617047647063633 0.8158752997711256 0.7822169899326223 0.777805238928515 0.920061016410406 1.0104967292086255 1.0 15.962796040306038 -6.7330168944029145 21.6303565751977 0.9163423959275582 1.010123074867334 0.2991128946777072 0.08143494791526798 68.27938489606473 51960.61981665406 0.013876817951079255 0.028876646918612348 1.8491966823480246e-07 6.7330168944029145 0.09378067893977582 (ac)ADELS(ph)EKQVYDAHTK ddPTM_A549_PD325901_60min_R1 8 ADELSEKQVYDAHTK 15 1 C9JKI3;Q03135-2 C9JKI3 CAV1 Caveolin;Caveolin-1 1 ADELS(0.999)EKQVY(0.001)DAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(1)EKQVYDAHTK;ADELS(0.995)EKQVY(0.005)DAHTK 161.14 1.8113e-91 6103093900.0 77778.79999999999 84985.20000000001 82015.3 92277.20000000001 97317.79999999999 91580.49999999999 91637.99999999999 93028.2 97596.1 92457.90000000001 96997.39999999998 True False 85674.84651827357 92147.20105958538 87581.35145606361 97976.95306727354 90482.53345618406 90834.698771418 95125.33423623764 91172.67957178885 93494.47531658008 86620.09241503617 85067.33471717927 1.007141540323487 1.0832266153153185 1.029553256220412 1.1517576446119357 1.0636577924653279 1.0677976343494633 1.1182357429264465 1.0717707316787086 1.0990643544601257 1.018253277865344 1.0 16.376317632630865 -10.825782990051875 1.0159594364219582 0.9989322489265252 1.0795159860261438 0.3208372991040854 0.037619376776047764 0.4412650992954219 0.7908732938313507 0.026041310304768518 0.006093420496138167 1.4935405212635154e-11 10.825782990051875 0.08058373709961864 (ac)ADFDDRVS(ph)DEEKVR ddPTM_A549_MK2206_60min_R1 2 ADFDDRVSDEEKVR 14 2 P52907 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 1 ADFDDRVS(1)DEEKVR;ADFDDRVS(1)DEEKVR 42.647 0.00822 86474000.0 416.7 631.76 314.63 472.15 641.9300000000001 476.22 342.83 402.46000000000004 792.09 632.65 1075.15 True False 487.0287726631264 663.9138855348652 359.2492650558533 587.8267711956186 547.5029473595291 526.6132843107482 405.11777333660154 459.5099374820584 612.682879707813 489.7339256054928 808.160582369549 0.6026386132755258 0.8215123330913412 0.44452708148982545 0.7273638235016292 0.6774680172525062 0.6516196110019417 0.5012837574294766 0.5685874162963537 0.7581202214928745 0.6059859095943277 1.0 9.658498176279025 -9.720191915212137 0.8145014821442969 0.9708275486898144 0.6291286858033728 0.0 0.14973535322719778 0.24571725450879212 0.34288578394356684 0.038175486281040706 0.02179418883681657 1.9046188787819562e-10 9.720191915212137 -0.3416988628864416 (ac)ADFDDRVS(ph)DEEKVR ddPTM_A549_PD325901_60min_R1 1 ADFDDRVSDEEKVR 14 2 P52907 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 1 ADFDDRVS(1)DEEKVR 43.408 0.0064872 61447000.0 844.4 990.53 1035.8 819.75 1059.0 752.67 821.67 1016.9 912.11 1056.7 1096.6 True False 930.1228663855741 1074.0054393653377 1106.0956167713916 870.3840957126723 984.6194933516675 746.5405050669433 852.9391014850759 996.6171317573824 873.777188647966 989.9797816624493 961.7251519201428 0.9671400030752312 1.116748831223786 1.150116137196791 0.9050237419442525 1.0238054930619365 0.7762514098507559 0.8868844698322915 1.03628061485922 0.9085518735819861 1.0293791107427048 1.0 9.909480839885711 -6.268568221315717 24.971038872094358 0.9457480868390389 1.0818763757641654 0.32677774070269316 0.08447688872232893 437.3538301176189 1531972.450423976 0.011377064383947736 0.026969614383513522 5.388052003030982e-07 6.268568221315717 0.13612828892512652 (ac)ADGDS(ph)GS(ph)ERGGGGGPCGFQPASR ddPTM_A549_PD325901_60min_R1 2 ADGDSGSERGGGGGPCGFQPASR 23 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 2 ADGDS(1)GS(1)ERGGGGGPCGFQPASR;ADGDS(1)GS(1)ERGGGGGPCGFQPASR 89.46600000000001 2.4789000000000003e-07 7000700.0 603.79 899.53 908.2900000000001 603.5699999999999 1064.69 838.96 644.49 924.47 1131.51 663.06 780.48 True False 665.0863163132943 975.3365500008091 969.9320213914734 640.8511480930737 989.9098473811016 832.127787916301 669.01641962846 906.030720617315 1083.9565696320176 621.1942784414725 684.4859078703568 0.9716581578466379 1.4249183785760862 1.4170226300337228 0.9362517777567634 1.4462092440456682 1.2156974721441716 0.9773998440814844 1.3236659954567236 1.5836068459094144 0.9075340650535763 1.0 9.418877029497734 (ac)ADGGAAS(ph)QDESSAAAAAAADSR ddPTM_A549_MK2206_60min_R1 2 ADGGAASQDESSAAAAAAADSR 22 0 P14859-5;P14859-6 P14859-5 POU2F1 POU domain, class 2, transcription factor 1 1 ADGGAAS(0.999)QDESSAAAAAAADSR;ADGGAAS(0.98)QDES(0.017)S(0.002)AAAAAAADSR 100.45 1.5731e-15 2496900.0 133.08 0.0 0.0 282.24 203.35 249.7 0.0 0.0 205.42 328.35 318.52 True False 155.54065050638084 0.0 0.0 351.3888126702351 173.4374843761161 276.1230882625548 0.0 0.0 158.8926979883333 254.17550695102116 239.4226932952135 0.6496487378270186 0.0 0.0 1.467650404537739 0.7243986858098861 1.1532870358370286 0.0 0.0 0.6636492798634384 1.0616182762492656 1.0 7.903416092067987 -9.764331158442523 1.2400732549998488 0.9346267532786298 0.5156540585863307 0.14134174856446724 0.47518904432209114 0.6550055155431932 2.0439025315647035 0.13760126856519322 0.09264987721956883 1.7205561153633008e-10 9.764331158442523 -0.41897269469229903 (ac)ADGGAAS(ph)QDESSAAAAAAADSR ddPTM_A549_PD325901_60min_R1 2 ADGGAASQDESSAAAAAAADSR 22 0 P14859-5;P14859-6 P14859-5 POU2F1 POU domain, class 2, transcription factor 1 1 ADGGAAS(0.999)QDES(0.001)SAAAAAAADSR;ADGGAAS(0.996)QDES(0.003)S(0.001)AAAAAAADSR 91.637 1.953e-15 3418500.0 702.2 395.97 330.58 651.02 653.72 393.18 418.5 563.44 0.0 324.12 479.48 True False 773.486827067682 429.3397815568359 353.0151467390298 691.2320268263053 607.8049624115691 389.97807243841356 434.42624651198696 552.2017471898707 0.0 303.65500788533495 420.50699967414744 1.8394148674506252 1.0210050769417227 0.839498859739749 1.6438062323860096 1.445409857344966 0.9273997168670418 1.0331011061614328 1.3131808688506352 0.0 0.7221164168982643 1.0 8.715986005263781 -8.73529377459593 24.993950303317096 0.5277777187290097 1.2366225295470978 0.4090922029795727 0.36421269478436935 180.39242857443986 172446.4939531774 0.07513752307138556 0.08518479085434053 1.839527248854097e-09 8.73529377459593 0.7088448108180881 (ac)ADGGS(ph)PFLGR ddPTM_A549_MK2206_60min_R1 3 ADGGSPFLGR 10 0 O60504-2;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 ADGGS(1)PFLGR;ADGGS(1)PFLGR;ADGGS(1)PFLGR 77.37899999999999 0.00015024 24302900.0 0.0 0.0 139.55 0.0 0.0 0.0 0.0 0.0 146.84 0.0 0.0 True False 0.0 0.0 159.3402883976236 0.0 0.0 0.0 0.0 0.0 113.58097445529584 0.0 0.0 0.0 (ac)ADGGS(ph)PFLGR ddPTM_A549_PD325901_60min_R1 2 ADGGSPFLGR 10 0 O60504-2;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 ADGGS(1)PFLGR;ADGGS(1)PFLGR 93.096 6.0088000000000005e-05 19497600.0 99.76100000000001 0.0 123.23 0.0 120.13 97.145 87.54799999999999 360.68 0.0 154.9 119.09 True False 109.8886632798334 0.0 131.59312884218835 0.0 111.69248322600171 96.35388332832211 90.87968704810383 353.48595445201374 0.0 145.1195875646006 104.44268497370946 1.0521432238887272 0.0 1.2599554375235877 0.0 1.0694141313402388 0.9225527221229186 0.870139321590404 3.384497004658526 0.0 1.389466266604793 1.0 6.706567641282512 (ac)ADGGS(ph)PFLGRR ddPTM_A549_MK2206_60min_R1 2 ADGGSPFLGRR 11 1 O60504-2;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 ADGGS(1)PFLGRR;ADGGS(1)PFLGRR 120.09 4.0237e-14 181004000.0 0.0 181.73 322.3 299.93 444.4 130.53 292.49 379.3 282.14 668.88 223.48 True False 0.0 190.97928076841066 368.00698638877884 373.4128634643695 379.0293486931204 144.34259796119844 345.63164694811593 433.06693655753264 218.2357404849983 517.7795434426646 167.98374826577395 0.0 1.1368914120564482 2.190729699676304 2.2229106524851305 2.2563453465358005 0.859265253045956 2.0575302701382636 2.5780287737856624 1.2991479398335524 3.0823192647390174 1.0 7.39217785474005 -8.981699285124321 20.936427613351505 1.1319728263026996 1.7033109317333495 0.0 0.9273516055384342 32.69824749627167 37410.14669224459 0.12897347768484113 0.13130251871513798 1.0430394024110344e-09 8.981699285124321 0.5713381054306499 (ac)ADGGS(ph)PFLGRR ddPTM_A549_PD325901_60min_R1 2 ADGGSPFLGRR 11 1 O60504-2;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 ADGGS(1)PFLGRR;ADGGS(1)PFLGRR 123.63 7.196600000000001e-13 217580000.0 732.98 342.86 374.1 513.74 426.2 721.3499999999999 378.69 432.00300000000004 485.91999999999996 661.05 523.19 True False 807.3915900086432 371.7540154672746 399.4886756460491 545.4725530118062 396.26518231018014 715.4755647628301 393.10125517711947 423.3863612652028 465.4984722323184 619.3111901845009 458.8409467746669 1.7596328219703259 0.8102023546077286 0.8706473963454591 1.188805307909199 0.8636221006334528 1.5593106277722733 0.8567266237687552 0.9227301186638089 1.0145094405903599 1.3497295621452887 1.0 8.841850332376975 -5.251762395414967 24.76826814076191 1.0115491518048287 1.7596332798996874 0.4486452101655978 0.22565171461153988 633.8989292357721 1622428.7775457979 0.02478855317954955 0.44656348963022663 5.600639313416442e-06 5.251762395414967 0.7480841280948587 (ac)ADGS(ph)LTGGGLEAAAMAPER ddPTM_A549_MK2206_60min_R1 5 ADGSLTGGGLEAAAMAPER 19 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 ADGS(0.82)LT(0.18)GGGLEAAAMAPER;ADGS(0.912)LT(0.088)GGGLEAAAMAPER;ADGS(0.992)LT(0.008)GGGLEAAAMAPER;ADGS(0.936)LT(0.064)GGGLEAAAMAPER;ADGS(0.886)LT(0.114)GGGLEAAAMAPER 108.17 2.0083e-17 2778180.0 663.25 1098.94 844.23 814.12 1232.36 643.19 736.02 713.47 1495.2099999999998 1491.29 1152.2499999999998 True False 775.1903850943573 1154.8713520477475 963.9545085913708 1013.5794365472354 1051.0814764974207 711.2519388850325 869.7453068028042 814.6065574102375 1156.54732235973 1154.4065532541133 866.1145245177999 0.895020650445663 1.3333933554465096 1.1129642573862184 1.1702602922073557 1.2135594621076229 0.8211984890578005 1.0041920348663196 0.9405298425906911 1.3353284001369514 1.332856707254525 1.0 9.758413991897394 -5.203415163469862 21.644665075383354 1.12635793083427 0.8950117256377214 0.14065206673230457 0.16443572698331235 21122.42505646056 7877793.5608183835 0.02352340203516897 43.391316982211215 6.260151398599806e-06 5.203415163469862 -0.23134620519654858 (ac)ADGS(ph)LTGGGLEAAAMAPER ddPTM_A549_PD325901_60min_R1 4 ADGSLTGGGLEAAAMAPER 19 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 ADGS(0.5)LT(0.5)GGGLEAAAMAPER;ADGS(0.825)LT(0.175)GGGLEAAAMAPER;ADGS(0.885)LT(0.115)GGGLEAAAMAPER;ADGS(0.894)LT(0.106)GGGLEAAAMAPER 87.18 3.2364000000000004e-08 4468650.0 871.19 1032.98 1229.08 1240.65 1164.42 1183.99 892.65 1263.84 937.91 1362.5299999999997 1485.0 True False 959.6325674638189 1120.0328498436247 1312.49275985845 1317.282132779417 1082.6351562309244 1174.347977990634 926.620284226823 1238.6317197367007 898.4929043698826 1276.4996232691756 1302.3544141906 0.7368444081023987 0.8600061839078679 1.0077846287902752 1.011462101580156 0.8312907334857625 0.9017115196868123 0.7114962518115379 0.9510711571600099 0.6898989204319523 0.980147653634289 1.0 10.346906392164403 (ac)ADHNPDS(ph)DSTPR ddPTM_A549_PD325901_60min_R1 2 ADHNPDSDSTPR 12 0 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2;H3BQ71 Q96BT3 CENPT Centromere protein T 1 ADHNPDS(0.82)DS(0.138)T(0.041)PR;ADHNPDS(0.748)DS(0.126)T(0.126)PR 59.57 8.871799999999999e-05 3010100.0 90.92399999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 100.15453754528892 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ADHS(ph)FS(ph)DGVPSDSVEAAK ddPTM_A549_MK2206_60min_R1 1 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 2 ADHS(0.982)FS(0.983)DGVPS(0.029)DS(0.006)VEAAK 45.257 0.0013306 1010800.0 399.9 463.87 137.83 450.97 581.67 547.45 598.73 573.61 965.4 736.88 749.16 True False 467.3933433836916 487.47900165103516 157.3763665341774 561.4576702448123 496.10711353358937 605.380795632101 707.5114909133489 654.9209741069503 746.7384414270133 570.4182962146135 563.1228962358472 0.8300023787133278 0.8656707175459425 0.2794707293668006 0.9970428728752357 0.880992616087501 1.075042055080203 1.2564068973978086 1.1630160636065778 1.3260665592156358 1.012955253688905 1.0 9.137306000963667 -6.9489252239682004 1.5105303401618024 1.1643057517947386 0.6951892901192573 0.5203486316950612 0.1839240173736588 0.23168694683581997 1.054743876977979 0.0296403469521696 0.06790665715974824 1.1247986230708126e-07 6.9489252239682004 -0.46911646167548127 (ac)ADHS(ph)FS(ph)DGVPSDSVEAAK ddPTM_A549_PD325901_60min_R1 3 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 2 ADHS(0.978)FS(0.978)DGVPS(0.035)DS(0.008)VEAAK;ADHS(0.875)FS(0.893)DGVPS(0.192)DS(0.041)VEAAK;ADHS(0.996)FS(0.997)DGVPS(0.005)DS(0.002)VEAAK 53.967 1.6638999999999998e-10 8987600.0 1494.75 1573.1499999999999 1316.24 1268.8400000000001 1585.69 1997.8600000000001 1377.54 1700.87 1427.3899999999999 1780.9599999999998 1582.27 True False 1646.495919623208 1705.724871470405 1405.5679615941076 1347.2133650552814 1474.3166047335274 1981.5900905483732 1429.9630385188116 1666.9448135432979 1367.401762182434 1668.5098816594639 1387.660820835934 1.1865261992706189 1.2292087849269016 1.0129045516665856 0.9708520589661912 1.062447380942406 1.4280075222954363 1.0304845514463647 1.2012624328033719 0.9854005688210641 1.2023902790988543 1.0 10.438439264757204 -8.776048674506585 24.948090338380247 0.9931058056015228 1.1366328416974767 0.0 0.1360500064622194 249.77546319701725 426536.69361547584 0.02082567833258514 0.022214781070887642 1.6747551636493367e-09 8.776048674506585 0.14352703609595385 (ac)ADHS(ph)FSDGVPSDSVEAAK ddPTM_A549_MK2206_60min_R1 3 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.983)FS(0.017)DGVPSDSVEAAK;ADHS(0.975)FS(0.025)DGVPSDSVEAAK;ADHS(0.988)FS(0.012)DGVPSDSVEAAK 111.22 1.5497999999999998e-153 44173600.0 4181.71 5415.900000000001 4040.14 4657.02 6951.0 5323.1 4216.76 5672.9 8148.699999999999 9235.9 9235.8 True False 4887.480415006293 5691.5461768207515 4613.092603129883 5797.990109061575 5928.517107934018 5886.386908812194 4982.890709374461 6477.050947527623 6303.03246079998 7149.503775388871 6942.295964887389 0.7040149886616902 0.8198362912799085 0.6644909157520644 0.8351689611601892 0.8539706658890888 0.8479020396975652 0.7177583229779931 0.9329839840143846 0.9079175668509865 1.0298471588577458 1.0 12.76119715630711 -8.18259789847306 0.2112532588589852 1.049709279696734 0.6682507172726206 0.6881267711323606 0.06285148539425976 1.131210338881807 0.18288281276734103 0.11097940504992584 0.15629942622086673 6.5675305480116776e-09 8.18259789847306 -0.38145856242411336 (ac)ADHS(ph)FSDGVPSDSVEAAK ddPTM_A549_PD325901_60min_R1 5 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.991)FS(0.009)DGVPSDSVEAAK;ADHS(0.994)FS(0.006)DGVPSDSVEAAK;ADHS(0.737)FS(0.263)DGVPSDSVEAAK;ADHS(0.99)FS(0.01)DGVPSDSVEAAK;ADHS(0.988)FS(0.012)DGVPSDSVEAAK 131.51 5.831899999999998e-196 148462000.0 14021.869999999999 16391.35 16913.21 17435.91 18653.95 20619.530000000002 17206.65 21230.269999999997 18556.97 19603.46 23372.079999999998 True False 15445.359920044886 17772.706589947826 18061.042137993903 18512.886560875297 17343.760904633928 20451.611384063395 17861.45848159016 20806.815610025376 17777.085084501476 18365.69419005259 20497.462327822122 0.753525469300666 0.8670686305311139 0.8811355205409425 0.9031794406933451 0.8461418602581093 0.9977630916927462 0.8713985270921076 1.0150922722654967 0.867282242074027 0.8959984361148946 1.0 14.323157688612557 -2.0000000000002567 0.23976709324383164 0.9558200394794518 9.235050281628462e-14 0.4356653780444696 0.05571862166624591 34.26978162768859 0.41086264368567676 0.03015024717542054 13.233860149813772 0.00999999999999409 2.0000000000002567 -0.9558200394793595 (ac)ADHSFS(ph)DGVPSDSVEAAK ddPTM_A549_MK2206_60min_R1 3 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.103)FS(0.894)DGVPS(0.003)DS(0.001)VEAAK;ADHS(0.049)FS(0.951)DGVPSDSVEAAK;ADHS(0.343)FS(0.626)DGVPS(0.024)DS(0.007)VEAAK 120.63 2.894999999999999e-134 56569400.0 5146.13 5942.7 5654.379999999999 5862.55 7110.299999999999 6356.1 4664.77 5533.28 9331.2 9730.4 9458.5 True False 6014.670933201093 6245.1580466760215 6456.256108274843 7298.875013179869 6064.384288957455 7028.698283162292 5512.298327239096 6317.639384959304 7217.698098864455 7532.295881943708 7109.693408680068 0.8459817586308171 0.8784004721007301 0.9080920564580945 1.0266089680138433 0.8529740933066934 0.9886077892727566 0.7753215237817782 0.8885951927612289 1.0151911881393543 1.0594403230873068 1.0 12.795571632507658 -8.761707151227958 24.999382162619995 1.0071736223144474 0.8974583424621769 0.4255452322107517 0.06601417429587339 5.263926352174229 491433.53624153463 0.010569214463564089 0.011597100373011858 1.7309831836858842e-09 8.761707151227958 -0.10971527985227048 (ac)ADHSFS(ph)DGVPSDSVEAAK ddPTM_A549_PD325901_60min_R1 1 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.114)FS(0.885)DGVPS(0.001)DSVEAAK 70.96 4.7001e-41 36721000.0 786.18 891.81 895.59 1001.3 763.53 1351.2 743.97 818.15 913.19 1058.9 743.63 True False 865.9924148448737 966.9659585074668 956.3701230201693 1063.148026882706 709.9022868355036 1340.1962751889328 772.2821854660051 801.8313564237411 874.8118000037678 992.0408732869954 652.1682242589601 1.3278666188143033 1.4826940696262874 1.4664469801589384 1.630174527577958 1.0885263348151393 2.054985547190311 1.1841763470514484 1.2294854710758698 1.3413897940179331 1.5211426076672514 1.0 9.34910033981418 -10.089213829833266 0.3868025220424621 0.9318885674955726 1.4831318138402574 0.0 0.2853152601982377 1.4153803481170186 0.376930536327516 0.31384026227748896 0.08432348440056797 8.14303253823952e-11 10.089213829833266 0.5512432463446848 (ac)ADHSFSDGVPS(ph)DSVEAAK ddPTM_A549_MK2206_60min_R1 1 ADHSFSDGVPSDSVEAAK 18 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.383)FS(0.156)DGVPS(0.39)DS(0.071)VEAAK 91.45700000000001 4.7001e-41 26782000.0 1550.0 2099.5 1059.2 1420.7 2022.5 1778.4 1370.3 1538.6 2888.9 2490.6 2943.5 True False 1811.6021061383396 2206.3555823104502 1209.410487071035 1768.7715637776464 1724.9929291895482 1966.589107593622 1619.2657725494985 1756.7012617648834 2234.568762625335 1927.971730203177 2212.547713532778 0.8187855543443862 0.9972013569766409 0.5466144208659653 0.7994275345833995 0.7796410078023808 0.8888346658312587 0.7318557528253321 0.7939721484966108 1.009952801902471 0.8713808603588403 1.0 11.111492851873493 -8.760528882860385 24.74492421571334 1.0046999460637671 0.793752383896534 0.28784907221911726 0.11038041657349214 12.964626512858528 352343.4152682038 0.016737195451929827 0.01844824026413023 1.7356858268239295e-09 8.760528882860385 -0.2109475621672331 (ac)ADKEAAFDDAVEER ddPTM_A549_MK2206_60min_R1 2 ADKEAAFDDAVEER 14 1 Q09028-3;Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028-3 RBBP4 Histone-binding protein RBBP4 0 ; 44.765 0.00069026 1164820.0 1065.68 1141.37 547.82 818.75 1143.39 893.3 629.16 679.3399999999999 977.85 1174.73 1372.13 False True 1245.540730625488 1199.4608578145653 625.5091135076044 1019.3437867550845 975.1988456395737 987.828413075451 743.4702280210487 775.6385253914957 756.3685363055778 909.3576771145815 1031.3922521385202 1.2076304897995365 1.1629531396300161 0.6064706344367574 0.9883182510257817 0.9455169394743529 0.9577621036295912 0.7208413932521937 0.7520305914488529 0.733347118651803 0.8816797636680822 1.0 10.010377397767432 -7.562039600641604 24.52472595890016 0.848902079212495 0.9696845949482626 0.183376909574005 0.16233192165521915 247.14190302855386 154773.19164907964 0.027575716638454307 0.04090144257347914 2.741324196045019e-08 7.562039600641604 0.12078251573576759 (ac)ADKEAAFDDAVEER ddPTM_A549_PD325901_60min_R1 1 ADKEAAFDDAVEER 14 1 Q09028-3;Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028-3 RBBP4 Histone-binding protein RBBP4 0 56.093999999999994 2.2226e-05 608970.0 679.35 707.34 566.83 625.42 505.33 595.57 755.01 524.71 705.94 774.88 711.12 False True 748.3171118889628 766.9500242099462 605.2984924256883 664.050772968124 469.83736409386006 590.7198753806042 783.7423187073252 514.244247422968 676.2717967724783 725.9539445581518 623.656748161091 1.1998861779263101 1.2297630490993139 0.9705635258665386 1.0647696427981233 0.7533589037226304 0.947187498768186 1.256688588744147 0.8245629489927981 1.0843653961358193 1.1640280437896222 1.0 9.28460839838399 -5.756551712424506 24.986487812180997 1.0136089650361226 1.2148246987529123 0.2598889782690129 0.13473956106955634 111.44794435170955 569718.0213456564 0.01665602337820892 0.060625927256341076 1.751653848411823e-06 5.756551712424506 0.2012157337167897 (ac)ADKMDMS(ph)LDDIIK ddPTM_A549_PD325901_60min_R1 2 ADKMDMSLDDIIK 13 1 Q86V81 Q86V81 ALYREF THO complex subunit 4 1 ADKMDMS(1)LDDIIK;ADKMDMS(1)LDDIIK 47.261 0.0034069000000000005 6313900.0 4014.7000000000003 4428.2 4264.1 4588.5 5401.4 4734.9 4684.6 4560.8 3994.5 4823.8 5960.6 True False 4422.269388534069 4801.379954769249 4553.48746811633 4871.92122376041 5022.02429781841 4696.340544251089 4862.87501651148 4469.831266121617 3826.6250562479304 4519.224444765144 5227.483987356556 0.8459651716255816 0.9184877402555602 0.8710667462836067 0.9319820463427286 0.9606962565480677 0.8983940564160281 0.9302515375031397 0.855063597886204 0.7320204261750375 0.864512345842772 1.0 12.351901022271457 -8.26771107933477 24.16626367769624 0.8685389624269304 0.9096599035025928 0.10031459075709093 0.0642406123384941 991.5809496954325 3820780.8913865914 0.01612958726770995 0.019750017356935077 5.398696591486879e-09 8.26771107933477 0.04112094107566244 (ac)ADKT(ph)PGGSQK ddPTM_A549_MK2206_60min_R1 1 ADKTPGGSQK 10 1 O15042-2;O15042;E7ET15;E7EW00;C9J5L1 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ADKT(0.964)PGGS(0.036)QK 69.672 4.1340000000000004e-07 57057000.0 5199.6 5230.8 5229.7 3526.5 4385.2 2173.3 2259.4 2155.5 4911.6 7174.2 8306.2 True False 6077.1653619850995 5497.025377446777 5971.350098409543 4390.492658310603 3740.1428890393136 2403.277163480215 2669.9037338526873 2461.048725941897 3799.1304422135036 5553.543237301703 6243.541300542204 0.9733523123259141 0.8804338936573387 0.956404356273094 0.7032055122193749 0.5990419073089995 0.3849221215644892 0.42762650318671336 0.3941751335461132 0.6084896790678037 0.8894861057168661 1.0 12.60814883419098 -6.266028301090902 22.31924702393385 0.7015266538305324 0.9311005689863763 0.28281667261811316 0.19500447763487921 133.47462655455504 649197.3131322492 0.03595417824838946 0.08644308819427576 5.41965571701242e-07 6.266028301090902 0.2295739151558439 (ac)ADKT(ph)PGGSQK ddPTM_A549_PD325901_60min_R1 2 ADKTPGGSQK 10 1 O15042-2;O15042;E7ET15;E7EW00;C9J5L1 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ADKT(0.93)PGGS(0.07)QK;ADKT(0.662)PGGS(0.338)QK 82.171 2.4390999999999997e-07 229166000.0 17320.3 15585.4 17184.9 16870.3 18354.3 17455.7 17113.8 18232.8 18338.7 18138.0 19379.6 True False 19078.64410546905 16898.836354966057 18351.170655198588 17912.340115768817 17065.157286897556 17313.546566618894 17765.075024030702 17869.132500645093 17567.988213547113 16992.763584549557 16996.032057406155 1.1225351918041 0.994281270939487 1.079732645432492 1.053913057781235 1.0040671392745038 1.0186816845332072 1.0452483829182606 1.0513708399872357 1.0336523345101436 0.9998076920044892 1.0 14.052910349483989 (ac)ADKTPGGS(ph)QK ddPTM_A549_MK2206_60min_R1 1 ADKTPGGSQK 10 1 O15042-2;O15042;E7ET15;E7EW00;C9J5L1 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ADKT(0.174)PGGS(0.826)QK 79.20100000000001 6.187200000000001e-06 50016000.0 10621.0 11839.0 11930.0 10529.0 9981.2 5581.4 5148.8 5188.1 9459.0 16080.0 17340.0 True False 12413.565141480842 12441.554531542479 13621.85339006557 13108.605472664765 8512.97870201569 6172.020043366527 6084.27031285329 5923.529062889889 7316.551602919122 12447.51683195499 13033.999440345984 0.9523987781567165 0.9545461919409305 1.0451015785607538 1.0057239554643407 0.6531363409195999 0.47353232379782056 0.4667999519794198 0.45446749403363873 0.5613435566270751 0.9550036340667952 1.0 13.669992217669943 -6.756893879637075 24.656573154786308 0.7046690741757196 0.9909257274030929 0.4346687064721232 0.17879754235852546 106.00891686678192 575024.7116698758 0.03318421700383241 0.06726982020073496 1.7502743179466124e-07 6.756893879637075 0.28625665322737337 (ac)ADLEEQLS(ph)DEEKVR ddPTM_A549_MK2206_60min_R1 2 ADLEEQLSDEEKVR 14 1 C9JUG7;F8W9N7;P47755-2;P47755 C9JUG7 CAPZA2 F-actin-capping protein subunit alpha-2 1 ADLEEQLS(1)DEEKVR;ADLEEQLS(1)DEEKVR 167.98 2.3844e-47 37752000.0 2047.6 2579.7 2318.85 1813.4 3504.6 2374.34 1931.5500000000002 1622.2 3661.98 3977.41 3153.1 True False 2393.1848209863624 2710.995711210415 2647.6977982861285 2257.6830814066207 2989.0779825155487 2625.5910828406663 2282.487632611825 1852.1518177791447 2832.5473769804166 3078.9103185687873 2370.098248867065 1.0097407658650155 1.1438326290930356 1.1171257560954526 0.9525694061357244 1.2611620568659392 1.107798414726364 0.9630350276419474 0.7814662614364173 1.195118125729348 1.299064424877974 1.0 11.210731149783669 (ac)ADLEEQLS(ph)DEEKVR ddPTM_A549_PD325901_60min_R1 1 ADLEEQLSDEEKVR 14 1 C9JUG7;F8W9N7;P47755-2;P47755 C9JUG7 CAPZA2 F-actin-capping protein subunit alpha-2 1 ADLEEQLS(1)DEEKVR 60.448 0.00097333 29150000.0 0.0 141.23 237.4 0.0 0.0 0.0 137.94 193.93 126.86 0.0 190.27 True False 0.0 153.13194774672806 253.5113916021708 0.0 0.0 0.0 143.1893821836643 190.06191401485816 121.52851536753349 0.0 166.86799622090604 0.0 0.9176831460480074 1.519233150415272 0.0 0.0 0.0 0.8580997280874931 1.1389956032266797 0.7282913327888803 0.0 1.0 7.3825634750878 -7.9566695102931515 24.720473446390123 0.8934126526712591 0.4419063582738728 0.06034229146562908 0.5278812326381315 168.489142733137 96124.26155217057 0.07431885902145041 0.1026862277710111 1.1049191221550278e-08 7.9566695102931515 -0.4515062943973863 (ac)ADQLTEEQIAEFK ddPTM_A549_MK2206_60min_R1 2 ADQLTEEQIAEFK 13 0 F8WBR5;M0QZ52;G3V479;P0DP25;P0DP24;P0DP23 F8WBR5 CALM2;CALM3;CALM1 0 ; 108.67 4.2098e-22 6117000.0 1806.03 1920.26 1433.6100000000001 1738.73 1944.65 2026.54 1668.21 1766.56 2453.4 2544.8999999999996 2207.0 False True 2110.843710805823 2017.9930319063892 1636.9174550320113 2164.718928054555 1658.5945610622784 2240.98711769162 1971.3021633399999 2016.9752898631036 1897.7088172747394 1970.0053224901887 1658.940989898707 1.272404337260187 1.2164344869371186 0.9867243410098389 1.3048800055189005 0.9997911747081193 1.3508540275615541 1.18828950236522 1.2158209979405343 1.1439278605025074 1.187507774227988 1.0 10.69604685384036 -10.046551461689683 0.7260791999243945 1.0062278473236415 1.1877253023497585 0.007526966466453677 0.11955656077160605 0.5748645261623091 0.6030449418132303 0.05199329253990825 0.021098748431587506 8.983561356255118e-11 10.046551461689683 0.18149745502611703 (ac)ADS(ph)ELQLVEQR ddPTM_A549_PD325901_60min_R1 1 ADSELQLVEQR 11 0 H3BQF1;P07741-2;P07741;H3BSW3;H3BQZ9 H3BQF1 APRT Adenine phosphoribosyltransferase 1 ADS(1)ELQLVEQR 44.309 0.018544 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ADS(ph)LESTPLPSPEDR ddPTM_A549_PD325901_60min_R1 2 ADSLESTPLPSPEDR 15 0 F5H0W5;Q9BR77-2 F5H0W5 CCDC77 Coiled-coil domain-containing protein 77 1 ADS(0.851)LES(0.118)T(0.03)PLPSPEDR;ADS(0.853)LES(0.073)T(0.073)PLPS(0.001)PEDR 53.528 0.00060968 611240.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 93.266 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 91.40573646423842 0.0 0.0 0.0 0.0 (ac)ADSELQLVEQR ddPTM_A549_MK2206_60min_R1 3 ADSELQLVEQR 11 0 H3BQF1;P07741-2;P07741;H3BSW3;H3BQZ9 H3BQF1 APRT Adenine phosphoribosyltransferase 0 ;; 55.567 0.00055338 959720.0 0.0 0.0 93.01700000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 106.20820928614658 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ADSELQLVEQR ddPTM_A549_PD325901_60min_R1 4 ADSELQLVEQR 11 0 H3BQF1;P07741-2;P07741;H3BSW3;H3BQZ9 H3BQF1 APRT Adenine phosphoribosyltransferase 0 ;;; 55.567 0.00073819 1441590.0 98.87700000000001 0.0 0.0 0.0 91.145 0.0 0.0 0.0 100.27 0.0 0.0 False True 108.91492025059978 0.0 0.0 0.0 84.74328963318011 0.0 0.0 0.0 96.05600059831771 0.0 0.0 0.0 (ac)ADSS(ph)PALSLR ddPTM_A549_PD325901_60min_R1 1 ADSSPALSLR 10 0 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 ADS(0.163)S(0.836)PALS(0.001)LR 45.879 0.006100100000000001 4372900.0 107.22 0.0 0.0 149.96 0.0 85.089 0.0 0.0 0.0 0.0 0.0 True False 118.10489546880783 0.0 0.0 159.22268861612966 0.0 84.39606339516804 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ADVLDLHEAGGEDFAMDEDGDES(ph)IHK ddPTM_A549_MK2206_60min_R1 1 ADVLDLHEAGGEDFAMDEDGDESIHK 26 0 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 ADVLDLHEAGGEDFAMDEDGDES(1)IHK 40.764 2.2293e-09 4837200.0 797.99 765.07 608.89 844.17 1211.1 1039.3 807.78 813.72 1334.6 1229.1 1240.7 True False 932.6712030176343 804.0087951218175 695.2397578103119 1050.9916878962315 1032.9487943344689 1149.2780361684938 954.5431699263186 929.0673019129857 1032.315230918264 951.4454563529769 932.5999484219867 1.000076404245752 0.862115418816232 0.7454855203313038 1.1269480442011288 1.1076011703434878 1.2323376578704932 1.0235290829057637 0.9962120451379196 1.106921818583629 1.0202074940738286 1.0 9.865114539663399 -6.272859282291257 24.998818939467736 1.0668599422453622 0.8685147406620941 0.5371848175183885 0.08541837143662456 439.29140693523385 961633.9110697096 0.012471340632847163 0.02921584795128224 5.335077317255108e-07 6.272859282291257 -0.19834520158326807 (ac)ADVLDLHEAGGEDFAMDEDGDES(ph)IHK ddPTM_A549_PD325901_60min_R1 1 ADVLDLHEAGGEDFAMDEDGDESIHK 26 0 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 ADVLDLHEAGGEDFAMDEDGDES(1)IHK 87.719 1.7291e-24 21356000.0 1624.5 1341.2 1670.3 1289.9 2047.5 1240.3 1351.5 1298.6 1649.4 1404.4 1574.1 True False 1789.4180441063063 1454.2276309418094 1783.6566023298483 1369.5741934245511 1903.6906634915372 1230.199408020155 1402.9320720691762 1272.6984042680078 1580.0814539430057 1315.725944323597 1380.4956790420351 1.2962141579088708 1.0534097665201958 1.2920406991549427 0.9920887216213072 1.3789906715336928 0.8911287638899565 1.016252418147886 0.9219140802752597 1.1445754433939763 0.953082261899303 1.0 10.430970656952876 -7.271342434596015 24.99531036708231 1.042258551908508 1.1875428512912107 0.3807264387447449 0.12569147650103812 732.3524021261969 1848455.1676958683 0.017813631242587964 0.028679904461262187 5.3537435650592694e-08 7.271342434596015 0.14528429938270282 (ac)ADVLDLHEAGGEDFAMDEDGDES(ph)IHKLK ddPTM_A549_MK2206_60min_R1 4 ADVLDLHEAGGEDFAMDEDGDESIHKLK 28 1 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK;ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK;ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK;ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK 74.28 1.0919e-27 41100300.0 2863.3 3393.01 3203.2200000000003 3116.86 3576.2799999999997 2855.1000000000004 3150.8199999999997 3254.55 5055.27 4954.1900000000005 4267.7 True False 3346.555039036069 3565.6997162825332 3657.4847624581557 3880.490839921161 3050.213949469468 3157.2247869380035 3723.2832091253113 3715.8924291413637 3910.2594166073495 3835.0350381656117 3207.9123074720037 1.043218990507045 1.111532789714094 1.1401448705249795 1.2096623810079095 0.9508408139352132 0.9841992187829023 1.1606561689522759 1.1583522468759984 1.2189421161854734 1.1954924794025346 1.0 11.647418989015875 (ac)ADVLDLHEAGGEDFAMDEDGDES(ph)IHKLK ddPTM_A549_PD325901_60min_R1 5 ADVLDLHEAGGEDFAMDEDGDESIHKLK 28 1 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK;ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK;ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK;ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK;ADVLDLHEAGGEDFAMDEDGDES(1)IHKLK 137.25 7.957399999999999e-121 511334000.0 15567.099999999999 14940.8 14722.400000000001 15707.8 17881.3 16860.3 15350.7 16786.0 15549.400000000001 17570.9 16925.1 True False 17147.46053210667 16199.913650742163 15721.550596983154 16678.03513099787 16625.379175136142 16722.99530681465 15934.879288725348 16451.19006163774 14895.91279249508 16461.470375331446 14843.419997048706 1.155223023771885 1.0913868673097686 1.0591595872183799 1.1235978726138542 1.1200504451428135 1.1266268360081206 1.0735315238599767 1.10831533870959 1.0035364353671061 1.1090079226084322 1.0 13.857535913848324 -8.763031957655029 24.052493931269602 1.0016699710000032 1.1056009306489354 0.26824293067693183 0.040853931120648626 8.002952676481005 120866.92163161577 0.004179102497363575 0.004565504578317441 1.7257109005015108e-09 8.763031957655029 0.10393095964893218 (ac)ADVLDLHEAGGEDFAMDEDGDES(ph)IHKLKEK ddPTM_A549_MK2206_60min_R1 1 ADVLDLHEAGGEDFAMDEDGDESIHKLKEK 30 2 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 ADVLDLHEAGGEDFAMDEDGDES(1)IHKLKEK 80.23899999999999 2.9050999999999997e-22 7146200.0 864.1 772.41 1082.3 858.07 770.03 503.28 639.46 483.79 1252.6 1188.3 1483.6 True False 1009.9389547833154 811.7223697701431 1235.7864144231319 1068.297188520226 656.7596070525726 556.5367555497739 755.6416046956895 552.3687140447371 968.8880999911707 919.8622046898075 1115.1811747230272 0.9056276932168889 0.7278838525692897 1.1081485613582553 0.9579584131569961 0.5889263753180637 0.4990550129112416 0.6775953735798714 0.4953174664035434 0.8688167644435079 0.8248544949821895 1.0 10.123062397176392 (ac)AEAEES(ph)PGDPGTASPR ddPTM_A549_PD325901_60min_R1 1 AEAEESPGDPGTASPR 16 0 B1AV70;Q96EC8-2;Q96EC8 B1AV70 YIPF6 Protein YIPF;Protein YIPF6 1 AEAEES(0.999)PGDPGTASPR 56.225 4.2788e-06 4003000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AEAEGVPTT(ph)PGPASGSTFR ddPTM_A549_MK2206_60min_R1 2 AEAEGVPTTPGPASGSTFR 19 0 Q86VR2;K7ENZ6;K7EMF4;K7ELM8;K7EJ34;K7ENF4 Q86VR2 FAM134C Protein FAM134C 1 AEAEGVPT(0.019)T(0.981)PGPASGSTFR;AEAEGVPT(0.051)T(0.948)PGPAS(0.001)GSTFR 79.514 1.6317e-16 45729000.0 747.0799999999999 645.22 656.8 475.88 1078.27 738.39 564.84 766.3 813.05 802.13 1207.08 True False 873.1688396476321 678.0589420425572 749.9441162275823 592.470621363065 919.6579113756322 816.5259396963868 667.464116592614 874.925371695326 628.8954731740555 620.9282758965205 907.3287222867837 0.9623511503603052 0.7473134327034342 0.8265406988742322 0.6529834301617093 1.0135884479197073 0.8999229492465065 0.7356364900588317 0.9642870882453827 0.6931285847416142 0.6843476467179012 1.0 9.825481519022118 -11.104522266157046 1.4524812392166198 0.9997505845072531 0.8146823881103122 0.0 0.1467751044487564 0.4543272319285301 1.7175056242790356 0.08061250282813655 0.01764322297449469 7.860998869928318e-12 11.104522266157046 -0.18506819639694083 (ac)AEAEGVPTT(ph)PGPASGSTFR ddPTM_A549_PD325901_60min_R1 2 AEAEGVPTTPGPASGSTFR 19 0 Q86VR2;K7ENZ6;K7EMF4;K7ELM8;K7EJ34;K7ENF4 Q86VR2 FAM134C Protein FAM134C 1 AEAEGVPT(0.019)T(0.98)PGPASGSTFR;AEAEGVPT(0.133)T(0.867)PGPASGSTFR 70.335 1.6547e-14 36197000.0 687.05 572.75 852.35 906.06 1130.01 870.94 961.31 955.5699999999999 796.95 824.54 1257.3400000000001 True False 756.7988102205225 621.0176525662998 910.195596596926 962.0252683884397 1050.6419959228685 863.8473533992363 997.8931780990165 936.5104067198369 763.4569629682787 772.4784036831229 1102.6951509349553 0.6863173467107807 0.5631816300631686 0.8254281301819343 0.8724308505145378 0.9527946096725356 0.7833963472740365 0.9049583443374362 0.8492922145579279 0.6923554187401272 0.7005366832602395 1.0 10.10681828590644 -10.983823392613472 1.2275583641245742 1.0011982988296835 0.7876757480538074 0.0 0.1372029628046381 0.4669124607544168 1.2401067586003527 0.08434153844641616 0.018912644933831532 1.0379504162146821e-11 10.983823392613472 -0.21352255077587612 (ac)AEAS(ph)PHPGR ddPTM_A549_MK2206_60min_R1 2 AEASPHPGR 9 0 U3KQF4;K7EIY6;Q9BV68 U3KQF4 RNF126 E3 ubiquitin-protein ligase RNF126 1 AEAS(1)PHPGR;AEAS(1)PHPGR 61.65 0.00034179 20710000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AEAS(ph)PHPGR ddPTM_A549_PD325901_60min_R1 2 AEASPHPGR 9 0 U3KQF4;K7EIY6;Q9BV68 U3KQF4 RNF126 E3 ubiquitin-protein ligase RNF126 1 AEAS(1)PHPGR;AEAS(1)PHPGR 72.643 0.00024678 47762000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AEASSLGRQS(ph)PR ddPTM_A549_MK2206_60min_R1 2 AEASSLGRQSPR 12 1 Q8N344 Q8N344 MIER2 Mesoderm induction early response protein 2 1 AEASS(0.003)LGRQS(0.997)PR;AEASS(0.001)LGRQS(0.999)PR 77.279 2.6646e-12 14787300.0 162.07 134.4 270.0 129.19 0.0 121.98 131.78 0.0 350.28999999999996 390.6 261.8 True False 189.42345376892942 141.24038593118578 308.29005995957283 160.84155579955947 0.0 134.88784263622918 155.72272021205072 0.0 270.94987429818576 302.3631887165184 196.7878346875767 0.9625770519283416 0.7177292547347814 1.566611373355567 0.8173348523038222 0.0 0.6854480758446229 0.7913229009266677 0.0 1.3768629281802396 1.5364932959222541 1.0 7.620497226618625 (ac)AEASSLGRQS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AEASSLGRQSPR 12 1 Q8N344 Q8N344 MIER2 Mesoderm induction early response protein 2 1 AEAS(0.001)S(0.001)LGRQS(0.998)PR 55.261 1.0512e-05 9435900.0 0.0 0.0 0.0 0.0 0.0 116.78 0.0 0.0 189.85 0.0 115.97 True False 0.0 0.0 0.0 0.0 0.0 115.8289823982856 0.0 0.0 181.871264721159 0.0 101.70642519439994 0.0 0.0 0.0 0.0 0.0 1.1388560966221362 0.0 0.0 1.788198379537314 0.0 1.0 6.668267012562006 -8.753797456983568 24.997322148473852 1.3722048017588306 0.15184737503407522 0.18631968088107353 0.5502168184488482 77.89729373438789 254807.8305311854 0.07149595674363853 0.0803177655481875 1.7627979752863957e-09 8.753797456983568 -1.2203574267247554 (ac)AEDEPDAKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 AEDEPDAKSPK 11 1 A0A0A0MSQ2;F8W689;P48382-2;P48382;F8WDU3;F8WFE4;F2Z2G0;F6S3S0;A0A0A0MT34;A0A0A0MSM9;F6X9D6;F6R6G4;F6UE82 A0A0A0MSQ2 RFX5 DNA-binding protein RFX5 1 AEDEPDAKS(1)PK;AEDEPDAKS(1)PK 72.937 0.00014195 62402000.0 12104.5 12017.3 12382.8 11179.099999999999 17218.9 12241.900000000001 10762.3 11126.0 15631.900000000001 18088.0 17395.4 True False 14147.443673388083 12628.9292399616 14138.86723876813 13917.980001848875 14686.022619738904 13537.329732484448 12717.670600532341 12703.144571945975 12091.299609014835 14001.908237338426 13075.642091383763 1.0819693269755821 0.9658362588773728 1.0813134177238595 1.0644203859801404 1.123158810641988 1.03530898428345 0.9726230277374058 0.9715121049632243 0.9247193770302444 1.0708390562758696 1.0 13.67459417262284 -7.708323901320445 3.702386809851423 0.9643822056573235 1.0605470888790463 0.2892428474913996 0.05056712273043625 0.13977917362856615 3.9279574541126068 0.006788938205542933 0.010081864844602996 1.9573842915221094e-08 7.708323901320445 0.09616488322172279 (ac)AEDVSSAAPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 AEDVSSAAPSPR 12 0 P54274;P54274-2;E5RFJ5 P54274 TERF1 Telomeric repeat-binding factor 1 1 AEDVSS(0.001)AAPS(0.999)PR;AEDVSSAAPS(1)PR 78.505 6.2042e-06 46237000.0 144.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 130.27 0.0 True False 168.3504305601073 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 100.84191652355572 0.0 0.0 (ac)AEDVSSAAPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AEDVSSAAPSPR 12 0 P54274;P54274-2;E5RFJ5 P54274 TERF1 Telomeric repeat-binding factor 1 1 AEDVS(0.001)S(0.002)AAPS(0.997)PR;AEDVS(0.004)S(0.002)AAPS(0.994)PR 102.52 1.2654e-08 59387000.0 300.99 0.0 0.0 190.58 121.79 194.39 298.94 209.93 145.19 134.74 0.0 True False 331.5462832228731 0.0 0.0 202.3516937614163 113.23589055269079 192.8069522897991 310.31632528624476 205.74278146310093 139.08816921182557 126.23249340512777 0.0 0.0 (ac)AEEES(ph)DQEAER ddPTM_A549_PD325901_60min_R1 2 AEEESDQEAER 11 0 A0A1B0GWA0 A0A1B0GWA0 1 AEEES(1)DQEAER;AEEES(1)DQEAER 62.338 0.0010665 2131630.0 340.76 219.6 256.84 234.44 167.13 268.83 99.462 106.18 321.99 499.234 194.74 True False 375.35370434574645 238.106462686267 274.2707069043872 248.92082634812908 155.3913653671994 266.64073761030244 103.24708083769475 104.0621566034014 308.45788005038696 467.71228004019275 170.78821455857067 2.1977728692574474 1.3941621399444397 1.6059112018547856 1.4574824556337485 0.9098482923358214 1.56123616784377 0.6045328192261583 0.6093052548875613 1.806084107428873 2.738551259225173 1.0 7.416064613301393 -2.2585132952771523 0.8537941009412127 1.2660413990386317 199.85454881015667 0.13223543437607888 0.5825345579438463 421.4245169270312 1.793812500407277 0.06688872284979118 161674.03947449892 0.005514253210604326 2.2585132952771523 198.58850741111803 (ac)AEEQPQVELFVK ddPTM_A549_PD325901_60min_R1 2 AEEQPQVELFVK 12 0 O00299 O00299 CLIC1 Chloride intracellular channel protein 1 0 ; 75.682 0.0004928999999999999 2519700.0 980.3399999999999 981.47 1066.88 1200.1799999999998 1422.95 1376.1100000000001 931.24 1416.2600000000002 1415.55 1086.78 1337.92 False True 1079.863395111836 1064.1819213692647 1139.2848924706152 1274.3123927934544 1323.006900911006 1364.9034164078162 966.6788477940806 1388.0115832655242 1356.0593562077258 1018.1605253289647 1173.3643217736624 0.9203138147915646 0.9069492753628667 0.9709557989188451 1.0860330156171771 1.1275329208162246 1.1632392353166343 0.8238522595717287 1.1829331755778973 1.1557018830757535 0.8677275305166166 1.0 10.196435314745688 -6.09415518993188 3.1889894271343846 1.0758963392760672 0.9158101223179329 0.16239753363011478 0.11329470844137106 0.23781525440138343 4.589458336399612 0.013888141803836665 0.04295712286937976 8.050907002719834e-07 6.09415518993188 -0.1600862169581343 (ac)AENHCELLS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 AENHCELLSPAR 12 0 H3BSS5;Q9NXV2 H3BSS5 KCTD5 BTB/POZ domain-containing protein KCTD5 1 AENHCELLS(1)PAR;AENHCELLS(1)PAR 82.85 5.9144e-13 17503900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AENHCELLS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 AENHCELLSPAR 12 0 H3BSS5;Q9NXV2 H3BSS5 KCTD5 BTB/POZ domain-containing protein KCTD5 1 AENHCELLS(1)PAR;AENHCELLS(1)PAR 72.29 9.268700000000002e-15 14460000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AENPS(ph)LENHR ddPTM_A549_MK2206_60min_R1 1 AENPSLENHR 10 0 O00505 O00505 KPNA3 Importin subunit alpha-4 1 AENPS(1)LENHR 56.358999999999995 0.0017651 1526100.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AENPS(ph)LENHR ddPTM_A549_PD325901_60min_R1 1 AENPSLENHR 10 0 O00505 O00505 KPNA3 Importin subunit alpha-4 1 AENPS(1)LENHR 46.843999999999994 0.006235 2839200.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AENS(ph)ESLGTVPEHER ddPTM_A549_MK2206_60min_R1 1 AENSESLGTVPEHER 15 0 B1AP46;E7EW84;Q8TAG9 B1AP46 EXOC6 Exocyst complex component 6 1 AENS(0.499)ES(0.499)LGT(0.002)VPEHER 57.019 0.0011965 852630.0 0.0 180.04 142.11 216.52 167.4 0.0 0.0 228.47 266.59 199.17 194.66 True False 0.0 189.20326698698426 162.26333489205513 269.5674097199523 142.7756817534391 0.0 0.0 260.8563221600303 206.20779065675106 154.17735867042754 146.3205496573096 0.0 1.2930737851252487 1.108957937023093 1.842307251792679 0.975773273732413 0.0 0.0 1.7827729787167248 1.4092879717831877 1.0536958686358067 1.0 7.192988589509157 -8.28544807306686 24.98984255624847 1.242887512699163 0.8030940153358057 0.16928277002312297 0.5871540791834665 1412.7326341530088 1470461.637090132 0.10165996907868083 0.1229331587473122 5.182650552768109e-09 8.28544807306686 -0.43979349736335727 (ac)AENSES(ph)LGTVPEHER ddPTM_A549_PD325901_60min_R1 2 AENSESLGTVPEHER 15 0 B1AP46;E7EW84;Q8TAG9 B1AP46 EXOC6 Exocyst complex component 6 1 AENS(0.252)ES(0.715)LGT(0.032)VPEHER;AENS(0.386)ES(0.603)LGT(0.011)VPEHER 48.823 1.2543e-05 2970000.0 692.3399999999999 489.03999999999996 127.13 441.84000000000003 534.66 586.22 551.01 223.23 532.21 368.83 343.26 True False 762.6258471262304 530.253117086029 135.75780629479348 469.13145330855394 497.10732607686737 581.4460186806213 571.9789870742417 218.77750252945273 509.8430645101296 345.54201085507833 301.04119610442115 2.533293971040764 1.7613971906426449 0.45096089190299266 1.5583629728398631 1.6512933529018978 1.9314500015437654 1.9000023733490656 0.7267360924701021 1.6935989861443483 1.1478230067064354 1.0 8.233817116456619 -12.611205722551585 0.34495730415820336 1.156082063179387e-09 1.6004574540042957 0.12179505433104676 0.5373349512212945 16.432332997565126 0.9050119234797962 12.242112835625262 0.17235392741955347 2.4479034107877713e-13 12.611205722551585 1.6004574528482136 (ac)AEPPS(ph)PVHCVAAAAPTATVSEK ddPTM_A549_MK2206_60min_R1 2 AEPPSPVHCVAAAAPTATVSEK 22 0 Q6PCB5 Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein 1 AEPPS(1)PVHCVAAAAPTATVSEK;AEPPS(1)PVHCVAAAAPTATVSEK 121.31 2.6331e-22 3634400.0 708.23 1231.79 994.3199999999999 1027.14 1708.27 1489.98 1624.49 1313.58 1946.87 1588.56 1889.3200000000002 True False 827.7619094389393 1294.482849599519 1135.3295274777863 1278.7893461100668 1456.9857459315845 1647.6486946313228 1919.638805260846 1499.7839876700348 1505.9070535125427 1229.7031926971654 1420.1497014206732 0.5828694739793081 0.9115115457930661 0.7994435560856987 0.9004609477654406 1.0259381419255038 1.1601936704159193 1.3517158109039489 1.0560745716945883 1.0603861353532522 0.8658968779608297 1.0 10.47182730038759 -6.444657712668308 1.5441251395380307 1.0670664833442784 0.7540477403641177 0.5263413996524191 0.13113530357925515 0.24985001629035003 1.145141530109936 0.01854145753479812 0.06008234328695804 3.592049289328319e-07 6.444657712668308 -0.31301874298016075 (ac)AEPPS(ph)PVHCVAAAAPTATVSEKEPFGK ddPTM_A549_MK2206_60min_R1 4 AEPPSPVHCVAAAAPTATVSEKEPFGK 27 1 Q6PCB5 Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein 1 AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK 133.56 2.0640999999999998e-41 111266000.0 5626.79 7081.299999999999 6067.41 5407.23 7362.6 6012.0 6474.22 5500.6 8357.800000000001 7759.2 9694.6 True False 6576.454590192352 7441.707923322217 6927.859972960407 6732.001592739783 6279.571293177247 6648.185849557381 7650.501970338915 6280.326894881004 6464.771644664068 6006.391331001564 7287.163262651561 0.9024711472979122 1.0212077944599833 0.9506936682024583 0.9238164907382941 0.8617305619268252 0.912314656600451 1.0498601025655006 0.8618342513429289 0.8871451635779254 0.824242728550593 1.0 12.83114159806585 -11.036687336296623 1.3660328817898784 0.999571604493835 0.9270117464080049 0.0 0.07690477435089335 0.6099950934664776 2.048330222207639 0.03994949220594707 0.009192020080838696 9.189939741075192e-12 11.036687336296623 -0.0725598580858301 (ac)AEPPS(ph)PVHCVAAAAPTATVSEKEPFGK ddPTM_A549_PD325901_60min_R1 2 AEPPSPVHCVAAAAPTATVSEKEPFGK 27 1 Q6PCB5 Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein 1 AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK 151.73 1.0034e-50 220430000.0 7777.200000000001 8949.9 9270.1 9544.099999999999 10670.5 10837.2 10138.9 9823.7 8707.2 10494.8 11157.8 True False 8566.735618727966 9704.139482676781 9899.224731639777 10133.617380776232 9921.040891226596 10748.94543626221 10524.741387718961 9627.758596956435 8341.266664103643 9832.15653694623 9785.461335121803 0.875455466568591 0.9916895228891107 1.0116257570922749 1.035578909744892 1.013855203292069 1.0984607744227946 1.0755488195476024 0.9838839751377542 0.8524142478766247 1.004771895797782 1.0 13.256424152908457 -8.530788348042744 24.675678550355087 0.929666847466137 1.0184745150453876 0.12150984686589339 0.06588105712977418 175.31206606229378 546920.3770255193 0.012540623077177952 0.014232124232083594 2.9458569375104974e-09 8.530788348042744 0.08880766757925052 (ac)AEQLS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 AEQLSPGK 8 0 O15541 O15541 RNF113A RING finger protein 113A 1 AEQLS(1)PGK 54.191 0.002357 13738000.0 3208.8 3444.4 3346.1 2786.3 4276.9 3214.9 3584.0 2736.4 4315.3 4584.1 3998.9 True False 3750.366992372065 3619.7052477780985 3820.627294928613 3468.94362508176 3647.773675575172 3555.0985841220954 4235.166407952568 3124.293079873539 3337.8914401180764 3548.5486262042823 3005.8627659746003 1.247684037616425 1.2042150722088838 1.2710584588813851 1.1540592153271554 1.2135529661788944 1.1827215215427225 1.408968651494436 1.0393997740813492 1.1104603569736895 1.1805424606780826 1.0 11.55356342852468 -8.311954266236127 24.99357422598606 1.0526621026377851 1.2335534426889143 0.4768513972874927 0.07697934087325553 176.45367870088637 87304.68826994336 0.011368521006751401 0.013743883417701759 4.875798324247726e-09 8.311954266236127 0.18089134005112917 (ac)AEQLS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 AEQLSPGK 8 0 O15541 O15541 RNF113A RING finger protein 113A 1 AEQLS(1)PGK;AEQLS(1)PGK 64.654 0.0013362 42148000.0 5540.4 5202.8 5844.2 5861.7 6123.4 4950.9 5204.0 6533.6 5439.9 6482.5 6355.4 True False 6102.857329373089 5641.258215228187 6240.822556029517 6223.7638961134135 5693.313508583189 4910.581511865661 5402.04106773807 6403.282222489953 5211.279920761829 6073.19384368963 5573.726090199961 1.0949331256344794 1.0121161542449968 1.1196859076018255 1.1166253589419088 1.0214555606873996 0.8810231131557975 0.9691974417681275 1.148833315248226 0.9349723751091025 1.0896111049245605 1.0 12.444426390437162 -6.981552680492536 8.187653622254693 0.9769496982434328 1.0815194241484234 0.16171913262873994 0.07476105162492357 0.16300706156556782 55.792561774384325 0.009840387516173223 0.018450810912710596 1.0433915602818715e-07 6.981552680492536 0.10456972590499058 (ac)AEQVALS(ph)R ddPTM_A549_PD325901_60min_R1 1 AEQVALSR 8 0 P11413;P11413-2;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 AEQVALS(1)R 77.192 0.00076787 2925500.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AES(ph)DWDTVTVLR ddPTM_A549_PD325901_60min_R1 1 AESDWDTVTVLR 12 0 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 1 AES(1)DWDTVTVLR 93.111 2.3819e-06 1643900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 108.34 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 101.49939391057995 0.0 0.0 (ac)AES(ph)LRSPRR ddPTM_A549_MK2206_60min_R1 1 AESLRSPRR 9 2 Q86UA6-6;Q86UA6-5;Q86UA6-7;Q86UA6-3;Q86UA6-4;Q86UA6-9;Q86UA6-2;Q86UA6;Q86UA6-8 Q86UA6-6 RPAIN RPA-interacting protein 1 AES(0.703)LRS(0.297)PRR 48.284 0.0010902000000000002 60259000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AES(ph)LRSPRR ddPTM_A549_PD325901_60min_R1 1 AESLRSPRR 9 2 Q86UA6-6;Q86UA6-5;Q86UA6-7;Q86UA6-3;Q86UA6-4;Q86UA6-9;Q86UA6-2;Q86UA6;Q86UA6-8 Q86UA6-6 RPAIN RPA-interacting protein 1 AES(0.616)LRS(0.384)PRR 42.21 0.0022069000000000004 63947000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AESLRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AESLRSPR 8 1 Q86UA6-6;Q86UA6-5;Q86UA6-7;Q86UA6-3;Q86UA6-4;Q86UA6-9;Q86UA6-2;Q86UA6;Q86UA6-8 Q86UA6-6 RPAIN RPA-interacting protein 1 AES(0.003)LRS(0.997)PR 81.33800000000001 0.00049273 101730000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AESLRS(ph)PRR ddPTM_A549_PD325901_60min_R1 1 AESLRSPRR 9 2 Q86UA6-6;Q86UA6-5;Q86UA6-7;Q86UA6-3;Q86UA6-4;Q86UA6-9;Q86UA6-2;Q86UA6;Q86UA6-8 Q86UA6-6 RPAIN RPA-interacting protein 1 AES(0.19)LRS(0.81)PRR 54.198 0.00044853 67853000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AESSESFTMAS(ph)SPAQR ddPTM_A549_MK2206_60min_R1 2 AESSESFTMASSPAQR 16 0 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSESFT(0.003)MAS(0.897)S(0.101)PAQR;AESSESFTMAS(0.676)S(0.324)PAQR 142.54 6.469199999999999e-47 108321000.0 223.81 363.2 320.4 115.13 348.03 0.0 187.93 0.0 202.48 0.0 465.4 True False 261.58365637085274 381.685328647371 365.83753781869274 143.33685516838204 296.8352480325532 0.0 222.07444839467817 0.0 156.6186032941181 0.0 349.82833561343807 0.7477486233702461 1.0910646445436458 1.0457630231044088 0.40973483442110287 0.8485168804637869 0.0 0.6348097789313198 0.0 0.44770130761272114 0.0 1.0 8.45050334007873 -6.24808792955815 24.364378114383964 0.6110916892860622 0.9744793864860433 0.1907387555589911 0.3650409062721687 804.5898826178948 1468249.9567082247 0.05049648393073535 0.13272123888643597 5.648226062621827e-07 6.24808792955815 0.3633876971999811 (ac)AESSESFTMAS(ph)SPAQR ddPTM_A549_PD325901_60min_R1 2 AESSESFTMASSPAQR 16 0 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSESFT(0.002)MAS(0.679)S(0.319)PAQR;AES(0.01)S(0.01)ES(0.001)FT(0.013)MAS(0.599)S(0.366)PAQR 134.88 6.469199999999999e-47 137937000.0 2671.45 2190.7 1866.3 2425.4399999999996 2900.26 2831.4700000000003 2605.7200000000003 2143.84 2796.4 2563.2200000000003 2600.0 True False 2942.653637382453 2375.3179772623184 1992.9583409735958 2575.2539202260978 2696.5557429538317 2808.4114470908876 2704.882100504697 2101.079429390054 2678.877032742952 2401.377851758138 2280.216482757952 1.290515027688632 1.0417072217587604 0.8740215484115291 1.1293900994484938 1.1825876022492006 1.2316424639181964 1.186239166744864 0.9214385762393801 1.174834518125584 1.0531359061371401 1.0 11.15495508439209 -4.245484269629677 16.134833056130077 1.0924510753518344 1.1087551408762324 0.0 0.12551727523719075 0.0 0.0 0.01657124623575403 0.0 5.682189723716806e-05 4.245484269629677 0.016304065524398004 (ac)AESSESFTMASS(ph)PAQR ddPTM_A549_MK2206_60min_R1 4 AESSESFTMASSPAQR 16 0 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSESFTMAS(0.043)S(0.957)PAQR;AESSESFTMAS(0.346)S(0.653)PAQR;AESSESFTMAS(0.196)S(0.804)PAQR;AESSESFTMAS(0.392)S(0.608)PAQR 169.37 7.196599999999999e-67 172750000.0 4502.789999999999 5683.59 5023.160000000001 4044.1000000000004 6425.66 4561.23 3915.98 4481.13 6553.799999999999 6770.23 7224.2 True False 5262.750869353967 5972.860454424318 5735.519620690843 5034.904681546551 5480.45392602033 5043.896331100569 4627.4628767338445 5116.343900385071 5069.37476426803 5240.830340871055 5430.231762223034 0.969157689726211 1.0999273541096783 1.056220042133677 0.9271988566995079 1.0092486225259631 0.9288547067530123 0.8521667360362256 0.942196231103502 0.933546667295969 0.9651209322832952 1.0 12.40679805821188 -6.253755639727481 24.720744070928426 0.9556303885854582 1.047584269069382 0.4209137727764154 0.049356713836235154 417.36889206343477 1342787.1318937135 0.007325007020312916 0.018973953264306793 5.574993434595072e-07 6.253755639727481 0.09195388048392372 (ac)AESSESFTMASS(ph)PAQR ddPTM_A549_PD325901_60min_R1 4 AESSESFTMASSPAQR 16 0 P49736;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 AESSESFT(0.021)MAS(0.247)S(0.731)PAQR;AESSESFTMAS(0.19)S(0.81)PAQR;AESSESFTMAS(0.295)S(0.705)PAQR;AESSESFTMAS(0.091)S(0.909)PAQR 174.62 7.196599999999999e-67 186793000.0 4576.63 4166.719999999999 3560.98 5310.96 6318.549999999999 5326.540000000001 4595.54 5100.8099999999995 5204.08 4926.280000000001 6336.12 True False 5041.246108463065 4517.86411750511 3802.6495167122903 5639.005937134701 5874.756845814142 5283.1624242487105 4770.4257894759785 4999.070343041964 4985.370615275687 4615.233840075797 5556.817407973969 0.9072182399279369 0.8130308746553425 0.684321480719437 1.0147905758146365 1.057216103121174 0.9507532885042134 0.8584816522188532 0.8996283260753459 0.8971629350501489 0.8305534447565237 1.0 12.440043120066854 -2.106845990107049 0.019879784248678558 1.6071579401629927 1.503143249630146e-06 0.0 0.10250703478742533 3434.3480598548886 5.202728608414786 155.85704166629085 282.4007118452557 0.007819050352840954 2.106845990107049 -1.607156437019743 (ac)AET(ph)LEFNDVYQEVK ddPTM_A549_PD325901_60min_R1 2 AETLEFNDVYQEVK 14 0 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 AET(1)LEFNDVYQEVK;AET(1)LEFNDVYQEVK 90.685 2.0791999999999997e-05 1630590.0 1598.02 1973.1999999999998 1850.85 1733.8 2214.1000000000004 2060.06 1984.3600000000001 1850.25 1857.44 1950.1399999999999 2285.1000000000004 True False 1760.2498139998522 2139.4884889460022 1976.4598110651984 1840.8928882545051 2058.589254230338 2043.2835543707163 2059.875905683457 1813.345312256954 1779.378256221594 1827.007827587025 2004.0471864423846 0.8783474889753843 1.0675838889522633 0.9862341687542 0.9185875964939162 1.0272159598620916 1.0195785649129274 1.0278579863881252 0.9048416247503795 0.887892395078967 0.9116590866457378 1.0 10.968700762678731 -8.260148145186557 24.995133688087122 0.9424146999856869 0.9921314278347153 0.2011517721541659 0.0572001132434587 190.99712748742158 3697234.8863589796 0.010089352903120423 0.012675462515294127 5.49353448148175e-09 8.260148145186557 0.049716727849028364 (ac)AFS(ph)QVQCLDDNHVNWR ddPTM_A549_PD325901_60min_R1 2 AFSQVQCLDDNHVNWR 16 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 AFS(1)QVQCLDDNHVNWR;AFS(1)QVQCLDDNHVNWR 194.6 2.6394e-41 24412000.0 3021.6 2884.8999999999996 3396.5 3692.9 3907.6 3639.6000000000004 3430.8 3269.5 3598.1000000000004 3806.2000000000003 4113.4 True False 3328.3506076156477 3128.02064755743 3627.0069148137027 3921.002045815584 3633.143656488171 3609.9603043055354 3561.3609714057948 3204.2872576268683 3446.8843697297984 3565.875882429845 3607.477876990985 0.9226253690547485 0.8670935080457174 1.0054134878961496 1.0869095194801615 1.0071146048215254 1.0006881337597062 0.9872163025920878 0.8882347631469275 0.9554831622709387 0.9884678448545774 1.0 11.81677483201799 -5.7642533754210605 24.999961257994524 0.9849265133774068 0.8948594280965734 0.38585652971059436 0.046283800932145173 57.316638380072156 509233.56002523546 0.006832277135575482 0.02270024493539162 1.720864298046155e-06 5.7642533754210605 -0.0900670852808334 (ac)AGAGS(ph)AAVSGAGTPVAGPTGR ddPTM_A549_MK2206_60min_R1 1 AGAGSAAVSGAGTPVAGPTGR 21 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AGAGS(0.928)AAVS(0.042)GAGT(0.028)PVAGPT(0.001)GR 50.843 1.6547e-07 3969400.0 337.31 493.89 403.61 606.23 774.62 521.0 439.19 401.82 682.41 655.74 635.67 True False 394.2396815622733 519.026891425248 460.8479670380857 754.7563772146992 660.6744241329088 576.1318741881895 518.9851380325582 458.7792155221406 527.8452245848435 507.6078785687909 477.81559540050324 0.8250875135873769 1.0862493740711865 0.964489170035994 1.5795976198350439 1.3826974893507484 1.205761971216695 1.0861619901659902 0.9601595677043433 1.104704889639288 1.0623510062356083 1.0 8.900310132392294 -7.884163394000494 4.662736168549703 1.0433261629739683 1.1879746465017942 0.10677301551873652 0.1899180936563497 0.3913292661040625 14.390823985041356 0.031041100809808025 0.043356973678497855 1.3056795617318489e-08 7.884163394000494 0.1446484835278259 (ac)AGAGS(ph)AAVSGAGTPVAGPTGR ddPTM_A549_PD325901_60min_R1 1 AGAGSAAVSGAGTPVAGPTGR 21 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AGAGS(0.943)AAVS(0.03)GAGT(0.027)PVAGPTGR 106.58 1.8421999999999998e-44 3858900.0 458.46 430.3 697.46 532.14 743.6 772.31 594.47 445.75 705.79 540.0 675.48 True False 505.00252169958577 466.5628911379816 744.7938297676917 565.0090792223745 691.3721012807367 766.0205634185639 617.092881156466 436.85916656588955 676.1281007508395 505.9043078430238 592.4002422205159 0.8524684591732542 0.7875805205432505 1.257247679332394 0.95376240412146 1.1670692413784993 1.2930794230388234 1.0416823579332002 0.7374392098970015 1.1413366379062968 0.8539907174020115 1.0 9.210428420290523 -5.735589671810492 24.99415074107492 1.0681322330550347 0.8200242041128407 0.23051560104935243 0.15876086906618284 205.96984693055032 199149.61821192733 0.019551203802565798 0.0756697572800468 1.8382743533499464e-06 5.735589671810492 -0.24810802894219397 (ac)AGAGSAAVSGAGT(ph)PVAGPTGR ddPTM_A549_PD325901_60min_R1 1 AGAGSAAVSGAGTPVAGPTGR 21 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AGAGS(0.046)AAVS(0.065)GAGT(0.872)PVAGPT(0.017)GR 48.824 9.2955e-10 4116600.0 763.33 584.61 536.95 744.98 679.78 875.07 552.03 343.68 843.72 702.34 751.9 True False 840.822699666154 633.8771363889733 573.3906559426523 790.9957226276624 632.0345979136886 867.9437200485337 573.0378037324068 336.82503278825556 808.2613825153344 657.9941325379059 659.4210666868092 1.2750922622032352 0.961263096391235 0.8695364538830894 1.199530561863812 0.958468920456665 1.3162207941117567 0.8690013599528661 0.510789008426129 1.2257136196396596 0.9978360804332915 1.0 9.365056167652147 (ac)AGLNS(ph)LEAVKR ddPTM_A549_PD325901_60min_R1 1 AGLNSLEAVKR 11 1 P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A590UJB9;A0A590UK79 P67936 TPM4 Tropomyosin alpha-4 chain 1 AGLNS(1)LEAVKR 80.979 0.0021804000000000003 5621500.0 1803.3 1811.8 1959.8 2120.3 2103.1 2037.1 2010.1 2052.6 1841.2 2150.6 2072.6 True False 1986.3696884807039 1964.4867445126533 2092.8038132347697 2251.266115449318 1955.385511301126 2020.5105329983512 2086.595455468927 2011.659282766451 1763.8207669454732 2014.8107489763088 1817.6833392938975 1.092802935219913 1.0807640154064369 1.1513577574231089 1.2385359247028425 1.0757569643900244 1.1115855492097124 1.1479422242377442 1.106716026537332 0.9703674610510828 1.1084498082922343 1.0 10.827885172520972 -8.70180999521273 5.1569289971096675 0.9859548202982835 1.128607357007319 0.3241025126393776 0.05661836443424822 0.08255039698410505 4.416540128854058 0.0075338746920475775 0.00847638055905802 1.9869640283398964e-09 8.70180999521273 0.14265253670903544 (ac)AGLS(ph)DLELRR ddPTM_A549_MK2206_60min_R1 2 AGLSDLELRR 10 1 Q8NC56;D6RBV0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 AGLS(1)DLELRR;AGLS(1)DLELRR 83.86200000000001 0.00057314 26446000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AGVEEVAASGSHLNGDLDPDDREEGAAS(ph)TAEEAAK ddPTM_A549_MK2206_60min_R1 1 AGVEEVAASGSHLNGDLDPDDREEGAASTAEEAAK 35 1 F8VQZ7;P50579-2;F8VY03;F8VRR3;G3V1U3;P50579-3;P50579;F8VSC4 F8VQZ7;G3V1U3 METAP2 Methionine aminopeptidase 2 1 AGVEEVAASGSHLNGDLDPDDREEGAAS(0.796)T(0.203)AEEAAK 56.055 2.2271e-23 3275700.0 413.7 496.47 357.5 321.19 639.2 504.65 514.01 621.29 501.78 528.52 596.61 True False 483.52244600608435 521.7382024051774 408.19887568721214 399.881564418767 545.17452674312 558.051728040441 607.3989635467909 709.3597601208266 388.12763117800574 409.12696492691845 448.45527140166195 1.0781954786590395 1.1634119067760476 0.9102331976417022 0.8916866183084967 1.2156720224051751 1.2443865946680295 1.3544248496585738 1.5817848631898093 0.865476795411279 0.9123027222941954 1.0 8.808820288754323 (ac)AGVEEVAASGSHLNGDLDPDDREEGAAS(ph)TAEEAAK ddPTM_A549_PD325901_60min_R1 2 AGVEEVAASGSHLNGDLDPDDREEGAASTAEEAAK 35 1 F8VQZ7;P50579-2;F8VY03;F8VRR3;G3V1U3;P50579-3;P50579;F8VSC4 F8VQZ7;G3V1U3 METAP2 Methionine aminopeptidase 2 1 AGVEEVAASGSHLNGDLDPDDREEGAAS(0.817)T(0.183)AEEAAK;AGVEEVAAS(0.033)GS(0.034)HLNGDLDPDDREEGAAS(0.694)T(0.238)AEEAAK 75.649 4.2992e-30 12844300.0 896.9300000000001 914.9100000000001 736.75 396.76 837.6499999999999 772.29 895.68 1201.2 1172.27 808.76 861.08 True False 987.9856733150331 992.012676576924 786.7502854376555 421.2669640926621 778.8163537356223 766.0007262919333 929.7655925349023 1177.2411236768294 1123.003568578737 757.6947555761546 755.1726188358533 1.3082911756494506 1.3136237355985905 1.041815163598597 0.5578419471061754 1.0313090468457626 1.0143385858888425 1.2311961124440598 1.5589033478089043 1.4870819473167851 1.003339814868009 1.0 9.560662645965651 -7.806513885218582 5.783921990440316 1.2667324262212147 1.0337684516325203 0.15630627905616223 0.24414585300932315 0.3043927006402761 23.91710361203158 0.04402820379978412 0.06173683489509334 1.5612991194765273e-08 7.806513885218582 -0.23296397458869444 (ac)AGVSFS(ph)GHR ddPTM_A549_PD325901_60min_R1 1 AGVSFSGHR 9 0 Q16643;Q16643-3;D6R9W4;D6RFI1 Q16643 DBN1 Drebrin 1 AGVS(0.027)FS(0.973)GHR 50.292 0.0090755 1187500.0 169.11 190.71 238.94 225.97 171.16 161.06 178.6 210.3 181.08 218.9 236.71 True False 186.27792270779787 206.78180099680324 255.15590526294307 239.92765368489472 159.13831206994467 159.74838075927283 185.39672073366998 206.1054015228415 173.46983732266258 205.07861664229225 207.59617062832123 0.8973090502777558 0.9960771452139354 1.229097359988265 1.1557421938888244 0.7665763370696506 0.7695150651178689 0.8930642611207072 0.9928188988218439 0.8356119325208643 0.9878728303204763 1.0 7.697636021396893 -6.749628908972166 24.99995151775909 0.9031218543262824 1.0757036931667217 0.3713434977711364 0.11031721183999302 210.12997439084145 444792.11180049524 0.017030397225801807 0.03522763611428101 1.779799543439925e-07 6.749628908972166 0.1725818388404392 (ac)AHS(ph)PVQSGLPGMQNLK ddPTM_A549_MK2206_60min_R1 4 AHSPVQSGLPGMQNLK 16 0 B4DR80;Q9Y6E0-2 B4DR80 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit 1 AHS(0.993)PVQS(0.007)GLPGMQNLK;AHS(0.998)PVQS(0.002)GLPGMQNLK;AHS(0.998)PVQS(0.002)GLPGMQNLK;AHS(0.991)PVQS(0.009)GLPGMQNLK 61.343999999999994 8.0008e-29 38920600.0 9027.800000000001 9238.7 10011.5 9584.599999999999 12843.599999999999 9257.5 9931.8 9681.3 13509.6 14646.400000000001 15959.899999999998 True False 10551.471931481103 9708.910368321778 11431.281241797264 11932.82743026904 10954.323453814042 10237.122505368838 11736.279500698478 11053.653922737783 10449.697170398156 11337.768067633431 11996.616359168269 0.8795373308255596 0.8093040635497075 0.9528754525071601 0.9946827566215803 0.9131177596958273 0.8533341568054096 0.9782991428019758 0.921397633449382 0.8710537086077693 0.9450804900474024 1.0 13.550339931199522 -10.939381062082811 1.1485746641575498 1.0009850434628433 0.9066697557483663 0.14957196729874545 0.05410634631771869 0.5249194400611351 1.2092739507713919 0.039987796657104384 0.008971015253891483 1.1497910874681509e-11 10.939381062082811 -0.09431528771447706 (ac)AHS(ph)PVQSGLPGMQNLK ddPTM_A549_PD325901_60min_R1 6 AHSPVQSGLPGMQNLK 16 0 B4DR80;Q9Y6E0-2 B4DR80 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit 1 AHS(0.999)PVQS(0.001)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(0.999)PVQS(0.001)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK 119.01 7.172599999999999e-47 127934600.0 22690.499999999996 24869.5 25251.8 25532.9 27783.900000000005 24916.1 25192.5 26067.1 24887.199999999997 27193.199999999997 29239.499999999996 True False 24994.022856136766 26965.340044517827 26965.538999409015 27110.00924357679 25832.454713251565 24713.191542506625 26151.214373364965 25547.17124125566 23841.27753156929 25476.21671117945 25643.226864461987 0.9746832170632578 1.0515579878867782 1.0515657464614787 1.0571996023303747 1.0073792526108258 0.9637317359912975 1.019809812220122 0.9962541522674181 0.9297300085353161 0.9934871631341378 1.0 14.646290197217306 -7.040046383595791 3.9790737867351083 0.972845703202657 1.036263724951858 0.3288912189637383 0.03104686678465302 0.1741750497975139 5.888916469219777 0.005315595743531592 0.009759870895167897 9.119134398148574e-08 7.040046383595791 0.06341802174920108 (ac)AKPLTDS(ph)EKR ddPTM_A549_PD325901_60min_R1 1 AKPLTDSEKR 10 2 P11216 P11216 PYGB Glycogen phosphorylase, brain form 1 AKPLT(0.348)DS(0.652)EKR 45.507 0.00020245 35501000.0 9142.0 9062.2 9356.3 9256.8 11115.0 10438.0 9373.9 9891.6 9824.2 10077.0 10893.0 True False 10070.089110015306 9825.903397793663 9991.274782002494 9828.571512281871 10334.320744668346 10352.996388707876 9730.628894094905 9694.304278189918 9411.323038575776 9440.736500248428 9553.2300564163 1.0541030678154626 1.028542528523557 1.0458530489687086 1.0288218177767678 1.0817619468639759 1.0837168504860222 1.0185695138325972 1.0147671751795475 0.9851456505284081 0.9882245527948615 1.0 13.221772891997638 -8.17118761623418 2.3265134050680047 0.9936502048432183 1.0520254443610144 0.6709983556208179 0.018481730066929596 0.13558660931750113 1.4387179648303077 0.0032219264883139934 0.00424522274251497 6.742366929420246e-09 8.17118761623418 0.05837523951779611 (ac)AKPLTDS(ph)EKRK ddPTM_A549_MK2206_60min_R1 2 AKPLTDSEKRK 11 3 P11216 P11216 PYGB Glycogen phosphorylase, brain form 1 AKPLT(0.002)DS(0.998)EKRK;AKPLT(0.156)DS(0.844)EKRK 71.558 4.3532e-06 19213600.0 3829.8 4152.3 4472.5 4153.4 5264.1 3616.1000000000004 3868.2 4554.799999999999 6356.799999999999 6883.9 7463.799999999999 True False 4476.176610379751 4363.634334092731 5106.767752478474 5170.983186453209 4489.757863311102 3998.7533018270883 4571.00186920818 5200.45684848998 4916.994949723676 5328.822208923814 5610.332469599442 0.7978451606272335 0.7777853376315643 0.9102433376542974 0.9216892607475717 0.8002659178648738 0.7127480097650228 0.8147470571444643 0.9269427216068844 0.8764177482114053 0.9498228915664018 1.0 12.453870552471187 -9.928770817392667 0.48086230153531584 1.0086676419722016 0.8234457690973936 0.44404635431539763 0.062219714835844604 0.7033854338235794 0.3195489816207414 0.05661751457273375 0.019260246215715468 1.1782275748593317e-10 9.928770817392667 -0.18522187287480796 (ac)AKPLTDS(ph)EKRK ddPTM_A549_PD325901_60min_R1 2 AKPLTDSEKRK 11 3 P11216 P11216 PYGB Glycogen phosphorylase, brain form 1 AKPLT(0.029)DS(0.971)EKRK;AKPLT(0.027)DS(0.973)EKRK 75.669 3.5993e-05 36770000.0 6357.2 6408.1 5886.0 6614.4 7504.6 7523.1 6670.4 7910.400000000001 7250.4 7741.5 7631.1 True False 7002.578264076711 6948.133076228906 6285.459355393335 7022.956465607685 6977.5027854645205 7461.834367875859 6924.245722182939 7752.620866411253 6945.690901945174 7252.7003688273435 6692.5230775285445 1.0463285943068672 1.0381933682916422 0.9391763438960702 1.049373514928717 1.0425818042963275 1.1149508610482686 1.0346241084221957 1.1584003187739753 1.0378284574418115 1.0837019588590893 1.0 12.708334493317619 -5.337348326465375 6.150364907571224 1.0335871829851695 1.0460850762043266 0.0 0.0565002208433307 1.6188455774788246 99.67017342261495 0.007645725298297322 0.04596564083789287 4.598875721847183e-06 5.337348326465375 0.012497893219157064 (ac)ALEVGDMEDGQLS(ph)DSDSDMTVAPSDRPLQLPK ddPTM_A549_PD325901_60min_R1 1 ALEVGDMEDGQLSDSDSDMTVAPSDRPLQLPK 32 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 ALEVGDMEDGQLS(0.316)DS(0.316)DS(0.316)DMT(0.052)VAPSDRPLQLPK 43.068000000000005 0.00016884 4670900.0 1265.0 754.79 1184.2 826.3 1030.9 1164.8 1259.8 1126.2 1226.6 1124.7 1129.0 True False 1393.4218687562193 818.3988022357349 1264.5669331730858 877.3386743365429 958.4931404119302 1155.3142549882098 1307.742378389011 1103.7370575131915 1175.0502676164003 1053.6862500574969 990.1401573206651 1.407297601712106 0.8265484398192019 1.2771595251676529 0.8860752367731809 0.9680378412341418 1.1668189058350167 1.320764912644067 1.114728101221469 1.1867514502149927 1.0641788864606687 1.0 9.951488947249276 -5.21682041102458 23.235926300495038 1.0902423440281666 1.4073005050277303 0.2864836486707092 0.147349873572927 14379.122051463815 7487697.909000165 0.019586644895469688 13.092202496175055 6.06987278409156e-06 5.21682041102458 0.31705816099956374 (ac)AMS(ph)SGGSGGGVPEQEDSVLFR ddPTM_A549_MK2206_60min_R1 2 AMSSGGSGGGVPEQEDSVLFR 21 0 B4DP61;Q16637-2;Q16637;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-3 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 AMS(0.5)S(0.5)GGSGGGVPEQEDSVLFR;AMS(0.497)S(0.497)GGS(0.006)GGGVPEQEDSVLFR 126.63 1.3684999999999999e-28 7639100.0 2008.7400000000002 2301.6 2158.73 2045.23 2693.2 2370.7 2100.8999999999996 2376.5 2548.7 2646.8 3401.6 True False 2347.7662030221486 2418.7416090715574 2464.870374579734 2546.311441813864 2297.0338476604657 2621.5659004567 2482.606335509919 2713.3761527260135 1971.4235194375672 2048.8860417175647 2556.888840615967 0.9182120730976165 0.9459705759006991 0.9640115500625105 0.9958631761247958 0.8983706335497552 1.0252952176932149 0.9709480897542057 1.0612022351633978 0.7710243355603372 0.8013199514860325 1.0 11.320173726204487 -8.747136590031726 24.99871274033458 0.8918725860121032 0.971335974405075 0.315410104687905 0.07066443156708149 342.4638186102865 598564.9600805738 0.01502513664097529 0.016998325351963335 1.7900427788332009e-09 8.747136590031726 0.07946338839297185 (ac)AMS(ph)SGGSGGGVPEQEDSVLFR ddPTM_A549_PD325901_60min_R1 3 AMSSGGSGGGVPEQEDSVLFR 21 0 B4DP61;Q16637-2;Q16637;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-3 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 AMS(0.333)S(0.333)GGS(0.333)GGGVPEQEDSVLFR;AMS(0.333)S(0.333)GGS(0.333)GGGVPEQEDSVLFR;AMS(0.333)S(0.333)GGS(0.333)GGGVPEQEDSVLFR 93.206 1.8317e-15 6051430.0 235.05 221.95 515.15 285.03 128.57 197.77 240.02 779.1700000000001 203.28 201.07 303.62 True False 258.9121029653356 240.65450543359276 550.111176848603 302.6356557499027 119.53968674242104 196.15942669043457 249.15409244398361 763.62884310296 194.73684852524207 188.37440588517907 266.2766648057577 0.9723424437293654 0.9037761743378614 2.065938362454313 1.1365459153946815 0.4489303891109734 0.7366752427725053 0.9356963090465903 2.867802342574812 0.7313327612365049 0.707438656040677 1.0 8.056782193073113 (ac)ANDSGGPGGPS(ph)PSER ddPTM_A549_PD325901_60min_R1 1 ANDSGGPGGPSPSER 15 0 Q9GZT9;Q9GZT9-2;Q9GZT9-3 Q9GZT9 EGLN1 Egl nine homolog 1 1 ANDS(0.001)GGPGGPS(0.856)PS(0.143)ER 45.33 0.0006051 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ANYIHVPPGS(ph)PEVPK ddPTM_A549_PD325901_60min_R1 2 ANYIHVPPGSPEVPK 15 0 H0YFP7;Q86U68;H0YH69;A0A5K1VW28 H0YFP7 ETNK1 1 ANY(0.017)IHVPPGS(0.983)PEVPK;ANY(0.025)IHVPPGS(0.975)PEVPK 58.831 6.6506e-10 2922700.0 2566.7 2726.5 2346.5 2424.7 2999.2 2864.3 2361.1 2857.9 3124.6 2984.5 3300.9 True False 2827.2694944953264 2956.271723652581 2505.747600650774 2574.468212106758 2788.5465386783003 2840.9740904556393 2450.9529525434946 2800.8969425208206 2993.2839280891926 2796.0581606620435 2894.9102261291255 0.9766346013001433 1.0211963386531346 0.8655700539637414 0.8893084797137767 0.9632583813857857 0.9813686327172895 0.84664212742125 0.9675246289989403 1.03398160712279 0.9658531499267733 1.0 11.499302894249137 -8.563624427381871 6.218017237829237 1.0155685076626082 0.9346211672186703 0.21716460577034846 0.05214140239157047 0.15544109241154083 15.645499761837362 0.008553547328598832 0.009750328209563269 2.7313387905446277e-09 8.563624427381871 -0.08094734044393792 (ac)AQES(ph)PK ddPTM_A549_PD325901_60min_R1 1 AQESPK 6 0 P53367;P53367-2;P53367-3 P53367 ARFIP1 Arfaptin-1 1 AQES(1)PK 43.246 0.027895 4095100.0 394.1 304.13 228.57 240.25 418.96 240.42 213.99 281.22 371.24 373.88 517.73 True False 434.10874187891403 329.760102444328 244.08213470306737 255.08969685266175 389.5336949335358 238.46209923099696 222.1335065498211 275.6108464871778 355.63807382187554 350.2731529932398 454.0524921608752 0.9560761131669003 0.7262598667281202 0.5375636934431508 0.5618066220464241 0.8579045411241135 0.5251861917905905 0.48922428658560707 0.6070021665898625 0.7832532140267815 0.7714375739383337 1.0 8.82671528421272 -9.595372878395002 0.9649217498833332 0.9615249087604659 0.6535411376157062 0.2091629164970744 0.15194622310820796 0.31941034530638934 0.6228134594559175 0.0440170059459322 0.029645358922301263 2.5387920027382114e-10 9.595372878395002 -0.3079837711447597 (ac)AQES(ph)PKNSAAEIPVTSNGEVDDSREHSFNR ddPTM_A549_PD325901_60min_R1 2 AQESPKNSAAEIPVTSNGEVDDSREHSFNR 30 2 P53367;P53367-2;P53367-3 P53367 ARFIP1 Arfaptin-1 1 AQES(0.832)PKNS(0.168)AAEIPVTSNGEVDDSREHSFNR;AQES(0.923)PKNS(0.077)AAEIPVTSNGEVDDSREHSFNR 76.002 3.281e-36 39975000.0 5663.1 5433.6 5671.0 5824.0 6786.200000000001 6540.1 5403.6 5601.8 6082.2 7482.700000000001 7820.8 True False 6238.0137430461255 5891.508541220861 6055.868162493309 6183.735252736324 6309.560723119062 6486.839593963242 5609.236954963376 5490.067704472917 5826.586285420248 7010.241044994431 6858.89118013592 0.909478453472491 0.8589593254203096 0.8829223271586154 0.9015648579824506 0.9199097284692637 0.9457563071928916 0.8178052118990201 0.8004307927165747 0.8494939097874395 1.0220662292028828 1.0 12.743759651407641 -10.760825862507321 1.0530030684894138 0.9987760902737302 0.8752672309493553 0.593324409631571 0.04242008832644694 0.3330538283247822 0.6659494507304193 0.02964494581921347 0.007856463917365449 1.7344993342863367e-11 10.760825862507321 -0.12350885932437483 (ac)AQS(ph)SPQLDIQVLHDLR ddPTM_A549_MK2206_60min_R1 2 AQSSPQLDIQVLHDLR 16 0 F6SS63;Q8N5C8-2;Q8N5C8;A0A0A0MQY2 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 AQS(0.5)S(0.5)PQLDIQVLHDLR;AQS(0.5)S(0.5)PQLDIQVLHDLR 54.7 0.0017945 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AQS(ph)SPQLDIQVLHDLR ddPTM_A549_PD325901_60min_R1 2 AQSSPQLDIQVLHDLR 16 0 F6SS63;Q8N5C8-2;Q8N5C8;A0A0A0MQY2 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 AQS(0.5)S(0.5)PQLDIQVLHDLR;AQS(0.5)S(0.5)PQLDIQVLHDLR 82.36200000000001 4.8029e-05 1437820.0 974.36 1223.79 1361.48 1087.26 1153.2 1028.84 935.31 1396.05 1190.07 1475.21 1143.67 True False 1073.2763099140786 1326.923078191379 1453.8782200443288 1154.417580853382 1072.2032103240253 1020.4614681508145 970.9037338712706 1368.2046875699614 1140.055496479904 1382.0649888390872 1003.0058403214572 1.0700598807780624 1.3229465122218116 1.449521190802209 1.1509579849339644 1.0689899970875452 1.0174033162396772 0.9679940981800285 1.364104407539103 1.1366389413191484 1.3779231718093923 1.0 9.970114291188723 -12.462401685589874 0.0289402228787724 3.1857848055913542e-09 1.9978866540846465 0.0 0.17857044695441213 790.5871392118357 2.942623647079965 130.4211330687526 78.29803807523984 3.448246582116945e-13 12.462401685589874 1.9978866508988617 (ac)AQVAMSTLPVEDEES(ph)SESR ddPTM_A549_MK2206_60min_R1 1 AQVAMSTLPVEDEESSESR 19 0 P78347-2;P78347-4;P78347-3;P78347;P78347-5;C9J6M0 P78347-2 GTF2I General transcription factor II-I 1 AQVAMSTLPVEDEES(0.733)S(0.117)ES(0.15)R 62.765 6.412999999999999e-08 1135300.0 250.04 373.13 313.07 135.82 538.84 394.02 265.04 280.85 728.29 407.04 536.26 True False 292.2406391089226 392.1207232329117 357.468033598309 169.09590609719152 459.57734979703156 435.7149348706917 313.1943372666709 320.6613475670526 563.3334778401486 315.08938129844273 403.0918419769282 0.7249976523356422 0.9727825830207587 0.8868153516705739 0.4194972174774752 1.1401306152540205 1.0809321586211382 0.7769800939920715 0.7955044339136149 1.3975313295285994 0.7816813651030862 1.0 8.654964775100835 -8.744534769729174 24.94718207039387 1.1877231387300695 0.8556685723021429 0.07154662253089594 0.23502604179043396 207.8186110399205 306690.6095731798 0.03803109120800581 0.0430684882660908 1.8007989562377298e-09 8.744534769729174 -0.33205456642792663 (ac)AQVAMSTLPVEDEES(ph)SESR ddPTM_A549_PD325901_60min_R1 2 AQVAMSTLPVEDEESSESR 19 0 P78347-2;P78347-4;P78347-3;P78347;P78347-5;C9J6M0 P78347-2 GTF2I General transcription factor II-I 1 AQVAMSTLPVEDEES(0.869)S(0.111)ES(0.02)R;AQVAMSTLPVEDEES(0.634)S(0.159)ES(0.206)R 101.15 2.7484e-21 1633000.0 240.87 491.47 496.62 461.4 525.79 216.26 364.07 405.32 614.51 766.42 599.39 True False 265.3229450808779 532.8879017141148 530.3236196186607 489.89963008457096 488.86032427702855 214.4988502607744 377.9248830767482 397.2355746326113 588.6842817160888 718.0281104019446 525.6688298462649 0.5047340264753253 1.0137331176169628 1.0088549853217608 0.9319548778036643 0.9299777664580166 0.40804939932144335 0.7189410168894257 0.7556764869409992 1.11987671380145 1.3659324457414306 1.0 9.038010380915374 -8.758158351773606 24.999019655750182 1.0566084545610932 0.794242523302138 0.36898172110806127 0.20772142865724047 81.434718949285 620471.5449468604 0.032744944194918885 0.03638752202408011 1.74518571001865e-09 8.758158351773606 -0.26236593125895524 (ac)AQVAMSTLPVEDEESSES(ph)R ddPTM_A549_PD325901_60min_R1 1 AQVAMSTLPVEDEESSESR 19 0 P78347-2;P78347-4;P78347-3;P78347;P78347-5;C9J6M0 P78347-2 GTF2I General transcription factor II-I 1 AQVAMSTLPVEDEES(0.306)S(0.306)ES(0.388)R 50.07899999999999 7.3887e-06 1265500.0 0.0 237.44 210.62 270.25 181.24 138.94 340.04 250.97 196.57 174.16 251.04 True False 0.0 257.4499020957525 224.91393976094864 286.94272871771824 168.51032764405682 137.80851870541017 352.98040827702783 245.96420646784372 188.30884649058848 163.16350787766842 220.16367147367558 0.0 1.1693568715151772 1.0215760768135675 1.3033155143037631 0.7653866167661779 0.6259366851169521 1.6032636352507086 1.1171879757521805 0.8553129825194803 0.7411009581441209 1.0 7.7824326236696475 -5.255237380449504 24.876364534116462 0.9945370388379698 4.666212129393822e-07 0.5450760394028171 0.26701171132379203 366.33455830563855 1469332.5906825187 0.03419651749832111 0.43714666463513824 5.55600489319397e-06 5.255237380449504 -0.994536572216757 (ac)AS(ph)CASIDIEDATQHLR ddPTM_A549_PD325901_60min_R1 1 ASCASIDIEDATQHLR 16 0 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 AS(0.5)CAS(0.5)IDIEDATQHLR 44.61600000000001 0.0010325 1867800.0 0.0 235.44 110.44 209.35 232.8 282.98 0.0 261.26 146.56 0.0 132.23 True False 0.0 255.2813550767518 117.9351225296704 222.2810740316533 216.4489311164005 280.67550470172 0.0 256.04896434549477 140.40059287612888 0.0 115.96654827503237 0.0 2.2013361514504433 1.016975363015628 1.9167689073962935 1.8664773103624575 2.4203143826964237 0.0 2.207955381566032 1.2106990762814416 0.0 1.0 6.857564895147524 -8.9834753973243 22.828232381273658 1.0929538895240285 1.4915625386363673 0.08424337480959188 0.85699676733469 91.12378484974772 125889.64375492716 0.12813778666059497 0.12971653352552515 1.0387824475262644e-09 8.9834753973243 0.39860864911233884 (ac)AS(ph)EDNRVPSPPPTGDDGGGGGR ddPTM_A549_MK2206_60min_R1 2 ASEDNRVPSPPPTGDDGGGGGR 22 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.996)EDNRVPS(0.004)PPPT(0.001)GDDGGGGGR;AS(0.889)EDNRVPS(0.111)PPPTGDDGGGGGR 94.09 3.549e-10 15634500.0 293.7 0.0 194.41 0.0 520.52 357.52 218.64 305.02 271.0 394.36 489.22 True False 343.26937972440675 0.0 221.9802613212612 0.0 443.9521975286743 395.3525290974311 258.36405787799936 348.2575190845733 209.6189326980738 305.27380210508494 367.7331722148822 0.933474066690453 0.0 0.6036449199952749 0.0 1.2072672009835819 1.0751070585125504 0.7025856718931688 0.9470386285441542 0.570029979714706 0.8301502969297 1.0 8.522515513803826 -6.761970821909012 24.99999486034141 0.8419474240760986 0.37250017339726893 0.4070614244045554 0.29587771017734915 11.933375657842983 561413.6777250424 0.04216653397803962 0.08327197468644514 1.729932580895942e-07 6.761970821909012 -0.46944725067882964 (ac)AS(ph)EDNRVPSPPPTGDDGGGGGR ddPTM_A549_PD325901_60min_R1 2 ASEDNRVPSPPPTGDDGGGGGR 22 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.987)EDNRVPS(0.013)PPPTGDDGGGGGR;AS(0.93)EDNRVPS(0.068)PPPT(0.001)GDDGGGGGR 113.25 2.227e-40 17354300.0 473.55 659.6 269.45 764.15 518.7 607.75 312.33 556.8199999999999 661.5 515.02 852.33 True False 521.624447390915 715.1868068664011 287.73649733447746 811.349809989434 482.26830141785643 602.80068549887 324.2158890635339 545.71378828316 633.6994554282157 482.5015493061369 747.4988133650336 0.6978264554597826 0.9567731668319676 0.3849323800785276 1.085419529078529 0.6451760093729346 0.8064236019121255 0.43373431939510826 0.7300530496182422 0.847759814594856 0.6454880471770221 1.0 9.54592747884635 -9.307594706242059 1.267736928749721 0.9594436174740495 0.720973246341261 0.0 0.21402060851455315 0.404188322677959 1.3497293377697466 0.04235600132634466 0.03570159196218951 4.924989327995312e-10 9.307594706242059 -0.23847037113278846 (ac)AS(ph)EDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIR ddPTM_A549_PD325901_60min_R1 2 ASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIR 41 3 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.868)EDNRVPS(0.132)PPPTGDDGGGGGREETPTEGGALSLKPGLPIR;AS(0.769)EDNRVPS(0.23)PPPT(0.001)GDDGGGGGREETPTEGGALSLKPGLPIR 136.86 7.302099999999998e-129 1133780000.0 7664.200000000001 8325.6 8302.6 8770.6 9293.2 8425.3 8046.1 10254.0 8869.8 9102.7 8971.9 True False 8442.263941914161 9027.227530695742 8866.064363589658 9312.340042522188 8640.477691799548 8356.68715019931 8352.298738494863 10049.47592589262 8497.033151560372 8527.953968523505 7868.413177560028 1.0729309393653477 1.1472742123457043 1.1267919164279319 1.1835092835592447 1.0981220097136453 1.062054948262223 1.0614972231395818 1.2771921986192563 1.0798915816715255 1.0838213215397006 1.0 12.941857001501457 -9.655337192095537 1.2036076196153747 1.0162458990568526 1.1253684962751842 0.17174788592403745 0.06427094185409556 0.317237074639669 0.9408042780863872 0.016648872801640693 0.01175107721173172 2.2113770998865318e-10 9.655337192095537 0.10912259721833162 (ac)AS(ph)EELQKDLEEVK ddPTM_A549_MK2206_60min_R1 1 ASEELQKDLEEVK 13 1 Q9HB71;B2ZWH1;Q9HB71-2 Q9HB71 CACYBP Calcyclin-binding protein 1 AS(1)EELQKDLEEVK 69.01 7.6513e-05 2806000.0 1560.4 1696.1 1750.5 1306.3 1604.5 1579.1 1306.0 1789.7 2252.2 1732.0 2369.8 True False 1823.7573718827512 1782.4242453711615 1998.7472220712302 1626.3435586420358 1368.4801754682967 1746.1993138782548 1543.2832948621815 2043.3954557263805 1742.0802960243627 1340.7399970737579 1781.313256847284 1.0238274289332963 1.0006236907066215 1.1220638561960623 0.9130025571810281 0.7682422898992771 0.9802876092489331 0.8663738895614644 1.1471286411144501 0.9779752602906245 0.7526694094483475 1.0 10.798725531792146 -5.8305928428862615 0.0023298502048206223 1.9508212204089996 5.854479739496856e-05 0.0 0.12445971541887152 774293.5894296017 316.6709541193176 130606.36488538678 134560.12601018843 1.477090677389841e-06 5.8305928428862615 -1.9507626756116048 (ac)AS(ph)EELQKDLEEVK ddPTM_A549_PD325901_60min_R1 2 ASEELQKDLEEVK 13 1 Q9HB71;B2ZWH1;Q9HB71-2 Q9HB71 CACYBP Calcyclin-binding protein 1 AS(1)EELQKDLEEVK;AS(1)EELQKDLEEVK 78.653 8.5817e-09 9282400.0 3143.7 2999.1 3755.4 3656.2 3866.6 3978.9 3684.7 3859.8 3867.7 3902.7999999999997 3765.4 True False 3462.8461097303766 3251.844682342364 4010.264027054726 3882.0351701673326 3595.0233550458506 3946.4971576000908 3824.9232748452046 3782.813261045479 3705.154019289051 3656.3765419439837 3302.279670837231 1.04862290747544 0.9847272207317074 1.214392609587182 1.1755622046339629 1.0886489678005982 1.195082655309909 1.1582675170196797 1.1455157158407536 1.1219988579433913 1.1072280080436003 1.0 11.689246592267612 -10.43547909815493 0.8021773472704811 1.0006935141853084 1.1280295064728494 0.06819502461220472 0.07016169425173312 0.5714962555905936 0.6706529256791777 0.04222021460742924 0.012731572134890163 3.668773511911809e-11 10.43547909815493 0.127335992287541 (ac)AS(ph)ESDTEEFYDAPEDVHLGGGYPVGSPGK ddPTM_A549_PD325901_60min_R1 2 ASESDTEEFYDAPEDVHLGGGYPVGSPGK 29 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 AS(0.254)ES(0.254)DT(0.254)EEFY(0.238)DAPEDVHLGGGYPVGSPGK;AS(0.253)ES(0.253)DT(0.253)EEFY(0.239)DAPEDVHLGGGYPVGSPGK 51.568000000000005 0.003343 7940800.0 1215.95 1797.98 1800.78 1503.04 1999.33 2137.7 2052.08 2119.72 2027.64 1875.5 2072.35 True False 1339.3923488649211 1949.5020846113584 1922.9917597698277 1595.8793671484902 1858.9039581140603 2120.291279952176 2130.1730273412636 2077.4405217118288 1942.4253421080377 1757.0806099251674 1817.4640877090178 0.7369567068328023 1.072649576844613 1.0580631401602172 0.8780802756659454 1.0228009294297964 1.16662072955999 1.1720578369316927 1.143043505377056 1.068755831404921 0.9667759719753439 1.0 10.827711142069141 -5.258882893535903 24.2906170943779 1.0502846803036179 0.7369565388017928 0.5410037929019064 0.08408914453617923 96.5654883590141 917438.3778809515 0.011823217226781434 0.11088615364901354 5.509562404043535e-06 5.258882893535903 -0.3133281415018251 (ac)AS(ph)GADSKGDDLSTAILK ddPTM_A549_MK2206_60min_R1 2 ASGADSKGDDLSTAILK 17 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 AS(0.998)GADS(0.002)KGDDLSTAILK;AS(0.999)GADS(0.001)KGDDLSTAILK 101.6 2.1066e-22 8478000.0 3850.8999999999996 4984.3 4622.5 3970.5 5982.299999999999 4705.7 4562.700000000001 4371.4 6485.2 5745.3 6334.6 True False 4500.837774534276 5237.979580333402 5278.04000801157 4943.272678242521 5102.311594704887 5203.654050609145 5391.683529454576 4991.059336851036 5016.31255473634 4447.432739715854 4761.543993934003 0.945247545810381 1.1000590537452466 1.1084723809620491 1.0381659152031424 1.0715666181400418 1.0928501463471452 1.132339328655441 1.0482018738479422 1.053505451409648 0.9340316387671073 1.0 12.217213747103385 -9.954167712064159 0.7626777999504628 1.0040958700518843 1.0707125515948426 0.3046288062973994 0.05154184641719308 0.6378384101290251 0.7553124688384247 0.020733667535302546 0.009465222156076114 1.1113024912811436e-10 9.954167712064159 0.0666166815429583 (ac)AS(ph)GADSKGDDLSTAILK ddPTM_A549_PD325901_60min_R1 2 ASGADSKGDDLSTAILK 17 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 AS(0.999)GADS(0.001)KGDDLSTAILK;AS(0.99)GADS(0.01)KGDDLSTAILK 93.01100000000001 2.1464999999999997e-31 5727800.0 3130.9 3916.6 3604.7 4436.8 4547.4 4490.7 5367.7 4719.5 4251.9 4469.4 4440.0 True False 3448.746663153239 4246.665627308896 3849.336618822011 4710.8510592961065 4228.0063116783485 4454.129228086837 5571.970760818147 4625.3658701238755 4073.2074293805445 4187.201321247424 3893.9081474789673 0.8856774563072477 1.0905921419996294 0.9885535233578088 1.2098002523110496 1.085800217043046 1.1438711596139148 1.4309456078016651 1.1878466812624935 1.0460460994740364 1.0753210303531027 1.0 11.927003137713744 -4.114367424714954 16.19172684850097 1.0740514778381758 1.0745962270139522 0.0 0.1391863104102237 0.0 0.0 0.019276442919213658 0.0 7.684800105995294e-05 4.114367424714954 0.0005447491757764045 (ac)AS(ph)GEHSPGSGAAR ddPTM_A549_PD325901_60min_R1 1 ASGEHSPGSGAAR 13 0 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 1 AS(0.97)GEHS(0.028)PGS(0.002)GAAR 53.123999999999995 5.941e-05 76874000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AS(ph)GTASRSEDEESLAGQK ddPTM_A549_MK2206_60min_R1 2 ASGTASRSEDEESLAGQK 18 1 F8W126;Q96EZ8-3 F8W126 MCRS1 Microspherule protein 1 1 AS(0.275)GT(0.242)AS(0.242)RS(0.242)EDEESLAGQK;AS(0.249)GT(0.249)AS(0.249)RS(0.249)EDEES(0.003)LAGQK 51.773999999999994 6.964699999999999e-05 4770400.0 1523.56 1175.03 1086.87 1140.98 1331.25 1417.7600000000002 945.46 1199.23 1910.27 1632.41 1824.46 True False 1780.6996805342762 1234.83400804108 1241.004509141707 1420.5201512205392 1135.4248884962112 1567.7864221670793 1117.237843767533 1369.224524987847 1477.596895074352 1263.6474472420173 1371.3962294656076 1.2984574714983446 0.9004210318722098 0.9049204617000367 1.0358203710200324 0.8279335060871887 1.1432045593256437 0.814671806559427 0.9984164281400957 1.077439811578108 0.9214313267686489 1.0 10.421429745419696 -8.535189626808153 23.21361094592992 1.0366403587488942 0.9786312883827867 0.0 0.13819177579881797 268.49458677155064 506274.07591761707 0.020751319404250002 0.02354123720912066 2.9161534504721547e-09 8.535189626808153 -0.058009070366107474 (ac)AS(ph)GVAVSDGVIK ddPTM_A549_MK2206_60min_R1 34 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 AS(0.999)GVAVS(0.001)DGVIK;AS(0.981)GVAVS(0.019)DGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(1)GVAVSDGVIK;AS(0.994)GVAVS(0.006)DGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(1)GVAVSDGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(0.995)GVAVS(0.005)DGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(1)GVAVSDGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(0.978)GVAVS(0.022)DGVIK;AS(0.995)GVAVS(0.005)DGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK 98.03299999999999 2.4096e-14 10408905210.0 55675.03 59346.5 56957.74999999999 54106.23200000001 73942.10000000002 60908.290000000015 53737.53 56206.32 87258.65000000002 82560.01999999999 86866.2 True False 65071.61394020341 62366.98336060356 65035.21541726798 67362.26126892114 63065.31504050753 67353.56482014926 63500.94361114495 64173.73798463591 67494.70509843102 63909.65414157591 65294.92515484328 0.9965799606307795 0.9551582027654328 0.9960225126691024 1.0316615128844284 0.9658532403697783 1.0315283256765213 0.9725249467788805 0.9828288773201204 1.033689906809313 0.9787844000129831 1.0 15.994683246689423 -6.099319625862035 0.4049325236315923 1.013148698223986 0.9678161075882045 0.0 0.027248434933567933 4.309088986351752 0.7324538696448921 0.006992707438777083 0.08404154031573505 7.95573619972856e-07 6.099319625862035 -0.04533259063578143 (ac)AS(ph)GVAVSDGVIK ddPTM_A549_PD325901_60min_R1 27 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(0.996)GVAVS(0.004)DGVIK;AS(0.978)GVAVS(0.022)DGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(0.997)GVAVS(0.003)DGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(0.994)GVAVS(0.006)DGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK 107.15 2.14e-16 12659582510.0 84584.48 89609.05000000002 85746.37999999999 91050.11 101824.30000000002 98013.03000000003 88893.05000000002 95706.73000000001 94507.84 95826.37 95511.99999999999 True False 93171.43414179677 97160.71912648826 91565.64498167031 96674.06850489695 94672.51244276513 97214.84437979644 92275.92366189355 93797.7841896727 90536.00414466654 89775.87664436945 83764.62950045287 1.1123004387107454 1.1599253731070698 1.0931301854701723 1.1541156342651082 1.1302206313973286 1.1605715319169514 1.101609643738646 1.1197779390782787 1.0808381137073741 1.0717635496004203 1.0 16.354053558837936 -9.620288423916536 0.5191115286126875 0.9994646839106088 1.1366459148430097 0.5793133029346931 0.02914661619842127 0.2162322856257379 0.12752484106609965 0.012376510130376219 0.005867716798540007 2.397240333529354e-10 9.620288423916536 0.13718123093240087 (ac)AS(ph)GVQVADEVCR ddPTM_A549_MK2206_60min_R1 5 ASGVQVADEVCR 12 0 F6RFD5;P60981 F6RFD5 DSTN Destrin 1 AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR 105.4 2.2461e-12 107499450.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AS(ph)GVQVADEVCR ddPTM_A549_PD325901_60min_R1 8 ASGVQVADEVCR 12 0 F6RFD5;P60981 F6RFD5 DSTN Destrin 1 AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR;AS(1)GVQVADEVCR 126.07 2.3125e-14 113735540.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AS(ph)GVTVNDEVIK ddPTM_A549_MK2206_60min_R1 6 ASGVTVNDEVIK 12 0 Q9Y281;G3V2U0;F8WDN3 Q9Y281 CFL2 Cofilin-2 1 AS(0.989)GVT(0.011)VNDEVIK;AS(0.995)GVT(0.005)VNDEVIK;AS(0.995)GVT(0.005)VNDEVIK;AS(0.91)GVT(0.09)VNDEVIK;AS(0.992)GVT(0.008)VNDEVIK;AS(0.992)GVT(0.008)VNDEVIK 127.3 7.2606e-25 371399900.0 16794.6 16949.2 15923.0 16525.559999999998 23763.8 18993.600000000002 17122.29 17960.399999999998 26922.4 26919.4 27651.5 True False 19629.117891452235 17811.841884113495 18181.12083235658 20574.322941860573 20268.176499715508 21003.490145068707 20233.188458488334 20506.341701418172 20824.519386238466 20838.28884366473 20784.869407423692 0.9443945740857693 0.8569619339417968 0.8747286536167923 0.9898702050305922 0.9751409115169308 1.0105182637119159 0.9734575696329217 0.9865994969443475 1.0019076366580688 1.002570111709336 1.0 14.343246063001073 -6.269596248671571 20.12367841215567 0.9961931275377593 0.8885217283339133 0.79354287508818 0.02274999805480333 11.301602394949322 27883.158381830766 0.0029637467693556276 0.007038384059854225 5.375312918291768e-07 6.269596248671571 -0.10767139920384605 (ac)AS(ph)GVTVNDEVIK ddPTM_A549_PD325901_60min_R1 5 ASGVTVNDEVIK 12 0 Q9Y281;G3V2U0;F8WDN3 Q9Y281 CFL2 Cofilin-2 1 AS(0.995)GVT(0.005)VNDEVIK;AS(1)GVTVNDEVIK;AS(0.91)GVT(0.09)VNDEVIK;AS(0.999)GVT(0.001)VNDEVIK;AS(1)GVTVNDEVIK 149.94 4.5784999999999996e-32 624925800.0 7040.6 7506.67 7471.2 7756.01 8665.29 8309.03 6570.62 8582.150000000001 7953.530000000001 7355.42 7454.360000000001 True False 7755.356528984221 8139.283425560655 7978.240559975308 8235.081122523257 8056.669924027644 8241.364014530118 6820.668539681226 8410.97228568357 7619.270793245613 6890.997525916174 6537.520977081373 1.1862839991140712 1.2450106782210857 1.2203770493348587 1.2596641986148926 1.2323738542900222 1.2606252497578085 1.0433111516723979 1.286569070320381 1.1654678921806199 1.0540688970748984 1.0 12.674527955235083 -10.416161137172375 0.37623512824366123 0.9438932958781479 1.233479282413751 0.5605392701178302 0.06318592849136731 0.9506435403181649 0.2006149081874373 0.109901778767285 0.020976846655176844 3.835649042142064e-11 10.416161137172375 0.2895859865356032 (ac)AS(ph)HLRPPSPLLVR ddPTM_A549_PD325901_60min_R1 2 ASHLRPPSPLLVR 13 1 Q8TDB6;Q8TDB6-2 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AS(0.796)HLRPPS(0.204)PLLVR;AS(0.805)HLRPPS(0.195)PLLVR 58.674 0.00010189 11429700.0 1515.74 2079.85 1806.75 1860.5 1921.6200000000001 2061.62 1956.19 2190.49 1570.25 1937.23 2310.3 True False 1669.616808971187 2255.126258734211 1929.3669198703535 1975.4188594979287 1786.652040429113 2044.830850247933 2030.6338809182407 2146.798958543837 1504.257853191467 1814.9129671902592 2026.1477461983452 0.8240350744924125 1.1130117549253244 0.9522340725104665 0.9749628886661404 0.8817975114506841 1.0092209978688094 1.0022141202329953 1.0595470950091717 0.7424225878956267 0.8957456190426265 1.0 10.984523663606643 -8.739806277986569 24.978303441878847 0.8783661738256247 0.9794837089439266 0.18164161638806864 0.09228822256327697 337.1105564306849 389239.0344060369 0.01885049584159623 0.02136526600107916 1.8205127380200975e-09 8.739806277986569 0.1011175351183019 (ac)AS(ph)KEMFEDTVEER ddPTM_A549_PD325901_60min_R1 2 ASKEMFEDTVEER 13 1 E9PC52;Q16576 E9PC52 RBBP7 Histone-binding protein RBBP7 1 AS(1)KEMFEDTVEER;AS(1)KEMFEDTVEER 76.143 1.2932e-12 4914500.0 1858.98 2235.0 1951.4 2526.3999999999996 2656.3 2254.02 2505.7 2472.2 2271.0 2774.8 2911.3999999999996 True False 2047.7022810912558 2423.3512937331816 2083.8337387214656 2682.4499901292993 2469.730651737519 2235.6640084379483 2601.05578467165 2422.8900315966193 2175.557767615235 2599.598654449669 2553.3162568851944 0.8019775362998941 0.9490995434656583 0.8161283323608125 1.0505749073957786 0.967263904374446 0.8755922821582814 1.018697068041502 0.9489188912901518 0.8520518215276673 1.0181263865922097 1.0 11.318156527453006 (ac)AS(ph)PAASSVRPPRPK ddPTM_A549_MK2206_60min_R1 1 ASPAASSVRPPRPK 14 2 Q9H875 Q9H875 PRKRIP1 PRKR-interacting protein 1 1 AS(1)PAASSVRPPRPK 58.32 0.00016276 5433000.0 2139.5 2734.5 2452.6 2625.1 2777.1 2570.3 2224.4 2208.8 3626.2 3924.6 3898.0 True False 2500.595294247082 2873.6743700061566 2800.415559469805 3268.249617845215 2368.5922688021237 2842.287439972944 2628.544686900028 2521.9041641663016 2804.8714898514954 3038.030134246925 2930.01902067293 0.853439952643303 0.9807698686359269 0.9557670239378312 1.1154363145037212 0.8083880179925027 0.9700576753662723 0.8971084038547766 0.8607125572813185 0.957287809417465 1.0368636219805798 1.0 11.516694314818634 -9.655379389873762 1.385656564728652 0.990322550480301 0.9354900414981431 0.12967873180186296 0.0790496478096845 0.6963509869394505 2.711879613410844 0.01916774563188897 0.014054951134594814 2.211162244135356e-10 9.655379389873762 -0.05483250898215797 (ac)AS(ph)PAASSVRPPRPK ddPTM_A549_PD325901_60min_R1 2 ASPAASSVRPPRPK 14 2 Q9H875 Q9H875 PRKRIP1 PRKR-interacting protein 1 1 AS(1)PAASSVRPPRPK;AS(1)PAASSVRPPRPK 68.809 7.3151e-06 34398000.0 6482.6 6833.7 6700.9 6000.1 6900.700000000001 8143.6 6951.0 7672.4 8016.2 7283.3 7952.1 True False 7140.708779762109 7409.599881872239 7155.663369785119 6370.712549784208 6416.01863812262 8077.281221601971 7215.524108733145 7519.367963118637 7679.306991086412 6823.431195024249 6974.0421125152025 1.0238981446567144 1.0624541352532717 1.0260424663831595 0.9134892573062765 0.9199856460013073 1.1581922063686654 1.0346258299451037 1.078193656104374 1.1011271321843015 0.9784040711167092 1.0 12.767779360467758 -7.244515099632349 24.994883739296746 1.0572113156213656 0.9910886092002017 0.2413388411100832 0.06107253067167384 1071.8348425067738 1582955.4789880048 0.009436495594411492 0.016315907366989395 5.694884237029376e-08 7.244515099632349 -0.06612270642116391 (ac)AS(ph)PGHSDLGEVAPEIK ddPTM_A549_MK2206_60min_R1 2 ASPGHSDLGEVAPEIK 16 0 F8WDN0;S4R325;Q8TCY9-2 F8WDN0 URGCP;URGCP-MRPS24 1 AS(1)PGHSDLGEVAPEIK;AS(1)PGHSDLGEVAPEIK 103.75 6.013999999999999e-56 35828000.0 3118.1 3805.8 3728.5 3428.6000000000004 5824.0 4672.299999999999 4284.799999999999 3847.5 6519.8 6455.4 6323.299999999999 True False 3644.3590497741675 3999.4989641138895 4257.257365034319 4268.607153915706 4967.297315006149 5166.719684778266 5063.292696650436 4392.89490747458 5043.075709981187 4997.120656529989 4753.050095798137 0.7667411401777374 0.8414594594005199 0.8956895633811822 0.8980774592906783 1.0450757334532228 1.0870324487734366 1.0652723187425617 0.9242265111739624 1.0610188422881222 1.051350302608344 1.0 12.214637891978471 -6.238426490272525 1.227200858857655 1.029387379836079 0.7928849104101338 0.7744859656709605 0.04849932683872368 0.19105276907878488 0.5065354221927698 0.007529756469283918 0.036004332933369895 5.775286183229738e-07 6.238426490272525 -0.23650246942594533 (ac)AS(ph)PGHSDLGEVAPEIK ddPTM_A549_PD325901_60min_R1 2 ASPGHSDLGEVAPEIK 16 0 F8WDN0;S4R325;Q8TCY9-2 F8WDN0 URGCP;URGCP-MRPS24 1 AS(1)PGHSDLGEVAPEIK;AS(1)PGHSDLGEVAPEIK 112.43 1.1572e-46 40465000.0 5427.7 5618.8 6419.2 5743.5 6207.5 6338.0 5710.4 7072.299999999999 6672.5 6714.0 7024.9 True False 5978.7161083384435 6092.315995180313 6854.8455137854025 6098.262950565089 5771.506614712444 6286.385429357199 5927.712396850778 6931.237428387979 6392.078029243791 6290.076894181588 6160.881834510133 0.9704318746788343 0.9888707751306397 1.1126403164215937 0.9898360517816972 0.9367987846128446 1.0203710439866025 0.962153236513439 1.1250398262084342 1.0375264776932767 1.0209702219814978 1.0 12.588921149741545 (ac)AS(ph)PGKDNYR ddPTM_A549_MK2206_60min_R1 2 ASPGKDNYR 9 1 Q5TD90;O15131 Q5TD90 KPNA5 Importin subunit alpha-6 1 AS(1)PGKDNYR;AS(1)PGKDNYR 78.556 0.0003396 37480000.0 5813.799999999999 6378.700000000001 4982.9 5820.5 7314.8 5904.0 5812.3 6243.799999999999 9893.2 10249.5 11626.599999999999 True False 6795.02730623682 6703.348584369455 5689.550147305754 7246.522761292172 6238.802609856968 6528.757361241981 6868.31967437018 7128.877770835546 7652.405996194041 7934.130831413095 8739.394342164163 0.7775169582923461 0.7670266750669914 0.6510233918448899 0.8291790572180191 0.7138712782140042 0.7470491781957106 0.7859033939266502 0.8157175991523229 0.8756220049797011 0.9078582016987164 1.0 13.093317586146211 -9.163873256234165 0.5237717832702499 0.9929595775519536 0.7368405388464939 0.7165837061590159 0.048740258872962364 0.20401556706536134 0.13084176558424349 0.018863592326292027 0.013281198876308343 6.856883073695615e-10 9.163873256234165 -0.2561190387054597 (ac)AS(ph)PGKDNYR ddPTM_A549_PD325901_60min_R1 2 ASPGKDNYR 9 1 Q5TD90;O15131 Q5TD90 KPNA5 Importin subunit alpha-6 1 AS(1)PGKDNYR;AS(1)PGKDNYR 77.058 0.0004049 119629000.0 13645.5 14881.6 13553.400000000001 14518.8 16248.7 15313.8 14737.8 15464.2 14691.400000000001 16282.5 16258.599999999999 True False 15030.781114713827 16135.72465897974 14473.215227215092 15415.593301412802 15107.447366971905 15189.089490074217 15298.655043833596 15155.754399569783 14073.9715487197 15254.42017121116 14258.895271757101 1.0541336357582776 1.1316251610978667 1.0150306143199255 1.0811211533299356 1.0595103673210609 1.06523606496778 1.0729200791688238 1.0628982197231724 0.9870309922674246 1.0698178141069539 1.0 13.799574590805557 -8.739382901374407 7.454226658192589 0.9938512476718016 1.068569020983053 0.20088151153808098 0.034645092289132706 0.07264322976175316 16.716574706451674 0.0040580133155862985 0.00454174030342127 1.8222883496446945e-09 8.739382901374407 0.0747177733112514 (ac)AS(ph)PPESDGFSDVR ddPTM_A549_MK2206_60min_R1 2 ASPPESDGFSDVR 13 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(1)PPESDGFSDVR;AS(1)PPESDGFSDVR 93.05799999999999 5.171100000000001e-05 6349600.0 0.0 97.705 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 107.08 True False 0.0 102.67776716820318 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 80.48908074234417 0.0 1.275673249355249 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 6.330721173426799 -10.743615848521365 0.960243645333766 1.0077315206254283 0.1451896266651124 0.0 0.4644674306510407 0.44305735112170314 0.7153944378212559 0.26472639880495913 0.06552864594416866 1.804613290380006e-11 10.743615848521365 -0.8625418939603159 (ac)AS(ph)PPESDGFSDVR ddPTM_A549_PD325901_60min_R1 2 ASPPESDGFSDVR 13 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(1)PPESDGFSDVR;AS(1)PPESDGFSDVR 105.17 6.1394e-09 7617000.0 108.27 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 119.26149069583867 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AS(ph)PSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER ddPTM_A549_MK2206_60min_R1 2 ASPSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER 37 1 D6RIS4;P35548 D6RIS4 MSX2 Homeobox protein MSX-2 1 AS(0.333)PS(0.333)KGNDLFS(0.333)PDEEGPAVVAGPGPGPGGAEGAAEER;AS(0.333)PS(0.333)KGNDLFS(0.333)PDEEGPAVVAGPGPGPGGAEGAAEER 59.836999999999996 0.00014205 6184700.0 963.23 1447.14 1265.75 1244.8400000000001 1657.37 1338.69 1587.6599999999999 1288.27 2017.23 2094.92 2033.4 True False 1125.7996752875044 1520.7932447652984 1445.252382940107 1549.8258558829905 1413.5730685047622 1480.3492872494974 1876.1172709960865 1470.8862176614107 1560.3306258543748 1621.6761170148723 1528.4506610149667 0.7365626539360569 0.9949900795328366 0.9455669193668235 1.013984877244143 0.9248404966936126 0.9685293251575895 1.2274634169416054 0.9623380428156376 1.0208576996644683 1.0609934349715935 1.0 10.577854266878534 -4.676435496258139 1.3563240390804632 1.011996950933684 6.217387117951516e-19 0.5098696738885077 0.07745842057849937 3.2204584470064854 1.6799005360160817 0.01028351114741761 6.629766450318348 2.1065147466071644e-05 4.676435496258139 -1.011996950933684 (ac)AS(ph)PSLERPEK ddPTM_A549_MK2206_60min_R1 4 ASPSLERPEK 10 1 Q13601-2;Q13601 Q13601-2 KRR1 KRR1 small subunit processome component homolog 1 AS(0.993)PS(0.007)LERPEK;AS(1)PSLERPEK;AS(0.907)PS(0.093)LERPEK;AS(0.997)PS(0.003)LERPEK 92.06200000000001 3.7465000000000003e-11 650160000.0 17668.4 19972.3 17691.9 16336.8 22669.2 19514.5 16673.7 17329.3 24720.3 26492.699999999997 25951.6 True False 20650.39396909332 20988.804761409385 20200.877451106528 20339.316733386815 19334.59070970766 21579.511437323275 19703.09546213134 19785.781343755465 19121.19152020736 20507.98067002077 19507.101492276972 1.058609039239837 1.0759571210371275 1.0355653021595355 1.0426621680027308 0.9911565138143352 1.1062387431503746 1.0100473137914396 1.0142860717461701 0.9802169495953873 1.0513084518548312 1.0 14.251711807246588 -8.114671611013883 2.788372086377468 0.9918046607865865 1.0490888575613448 0.16829707644333702 0.033454342434195136 0.17541678416761397 2.6510658989602085 0.004432401942041492 0.00589801106161734 7.679419442546791e-09 8.114671611013883 0.05728419677475838 (ac)AS(ph)PSLERPEK ddPTM_A549_PD325901_60min_R1 4 ASPSLERPEK 10 1 Q13601-2;Q13601 Q13601-2 KRR1 KRR1 small subunit processome component homolog 1 AS(1)PSLERPEK;AS(0.993)PS(0.007)LERPEK;AS(1)PSLERPEK;AS(0.975)PS(0.025)LERPEK 109.11 2.3901e-15 784180000.0 33487.4 36400.7 34047.3 35340.7 37874.0 36311.1 36162.100000000006 37833.9 37426.5 38418.4 40435.5 True False 36887.01619587907 39468.31473726775 36357.95452104715 37523.61477444687 35213.86089820684 36015.39444050682 37538.268504160435 37079.273184379635 35853.59435915966 35992.65566747483 35462.189841753556 1.0401787470114976 1.112968908953201 1.0252597113514663 1.05813022100136 0.9929973601558488 1.0155998431349524 1.0585434422316042 1.0456002110936227 1.0110372348451324 1.0149586313786154 1.0 15.113994007052021 -2.0000000351318645 0.14142016002472962 0.9895510151165986 1.2808308697200368 0.2561472122958238 0.02817056206869589 49.923900178572296 0.4485472601116237 0.0576135959308394 2.969489930073985 0.009999999191058958 2.0000000351318645 0.2912798546034382 (ac)AS(ph)SLNEDPEGSR ddPTM_A549_MK2206_60min_R1 1 ASSLNEDPEGSR 12 0 C9JA90;C9J5P1;C9IZY1;C9JNE2;Q9Y530 C9JA90 OARD1 O-acetyl-ADP-ribose deacetylase 1 1 AS(0.5)S(0.5)LNEDPEGSR 43.512 0.022664 486720.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AS(ph)SLNEDPEGSR ddPTM_A549_PD325901_60min_R1 1 ASSLNEDPEGSR 12 0 C9JA90;C9J5P1;C9IZY1;C9JNE2;Q9Y530 C9JA90 OARD1 O-acetyl-ADP-ribose deacetylase 1 1 AS(0.5)S(0.5)LNEDPEGSR 51.43600000000001 0.0028054 1215300.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AS(ph)SSGNDDDLTIPR ddPTM_A549_MK2206_60min_R1 1 ASSSGNDDDLTIPR 14 0 Q01658 Q01658 DR1 Protein Dr1 1 AS(0.333)S(0.333)S(0.333)GNDDDLTIPR 58.978 0.0028932 655390.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AS(ph)SSGNDDDLTIPR ddPTM_A549_PD325901_60min_R1 2 ASSSGNDDDLTIPR 14 0 Q01658 Q01658 DR1 Protein Dr1 1 AS(0.332)S(0.332)S(0.332)GNDDDLT(0.003)IPR;AS(0.486)S(0.486)S(0.027)GNDDDLTIPR 106.35 6.2189e-06 1680680.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AS(ph)TSRLDALPR ddPTM_A549_PD325901_60min_R1 1 ASTSRLDALPR 11 1 B1APE1;B1APE2;Q00403 B1APE1 GTF2B Transcription initiation factor IIB 1 AS(0.333)T(0.333)S(0.333)RLDALPR 48.79600000000001 0.013668000000000001 825190.0 0.0 104.73 0.0 151.14 124.52 0.0 0.0 121.91 0.0 0.0 0.0 True False 0.0 113.55596464996695 0.0 160.47557453615522 115.7741447706795 0.0 0.0 119.47840941345515 0.0 0.0 0.0 0.0 (ac)ASCAS(ph)IDIEDATQHLR ddPTM_A549_MK2206_60min_R1 1 ASCASIDIEDATQHLR 16 0 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 AS(0.222)CAS(0.778)IDIEDATQHLR 82.102 3.3782e-06 1080600.0 282.5 166.06 0.0 204.16 174.95 225.27 158.87 184.49 287.46 290.86 313.89 True False 330.1790935381166 174.51174470039217 0.0 254.1792091650907 149.21508675486362 249.1079218778762 187.73462255341087 210.64202247692918 222.35076897929264 225.15452398895698 235.9424500767129 1.3994052084767459 0.7396369099483898 0.0 1.0772932513095816 0.6324215362956039 1.0557995044846011 0.7956797197467941 0.8927686493398806 0.9423940834173709 0.9542772990436931 1.0 7.882291197184408 -7.263085640123061 24.979550334519956 0.955922614387771 0.7424000490706254 0.060483111915958565 0.32317180201082885 278.81523530402285 4230611.088426055 0.04582964313421393 0.0756032638279472 5.4565025170561086e-08 7.263085640123061 -0.21352256531714564 (ac)ASCAS(ph)IDIEDATQHLR ddPTM_A549_PD325901_60min_R1 1 ASCASIDIEDATQHLR 16 0 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 AS(0.126)CAS(0.874)IDIEDATQHLR 120.53 9.3427e-16 1870700.0 319.73 365.52 118.57 206.56 128.93 311.73 191.13 150.09 314.27 369.28 377.72 True False 352.1887542272144 396.3236531925514 126.61687321933192 219.31874206820305 119.8744015843536 309.1913742337522 198.40355674034913 147.09633720667279 301.0623248033639 345.9635977782807 331.2628345643592 1.0631701400803828 1.1964024087210179 0.3822248076390599 0.6620686632613864 0.36187096491521414 0.9333717579286158 0.5989309274650985 0.44404720922018875 0.9088321821531482 1.0443779430712605 1.0 8.371832541707422 -8.970416229901982 20.66972855778295 0.9597802931990155 0.7004372358395026 0.188593523188879 0.25831398882264456 35.498455656724985 24802.98053885002 0.045411086616181574 0.04767455868177199 1.0704928479862635e-09 8.970416229901982 -0.2593430573595129 (ac)ASEDNRVPS(ph)PPPTGDDGGGGGREETPTEGGALSLKPGLPIR ddPTM_A549_MK2206_60min_R1 2 ASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIR 41 3 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.044)EDNRVPS(0.892)PPPT(0.064)GDDGGGGGREETPTEGGALSLKPGLPIR;AS(0.055)EDNRVPS(0.936)PPPT(0.009)GDDGGGGGREETPTEGGALSLKPGLPIR 88.22200000000001 1.5509e-40 630530000.0 4111.0 5183.8 4305.200000000001 5247.0 6612.700000000001 6176.4 4992.799999999999 5511.5 6959.299999999999 7112.4 7137.1 True False 4804.836295699817 5447.6332782000045 4915.742096807232 6532.515235546782 5639.980589790723 6829.982548437493 5899.927132149994 6292.772003260854 5383.029661718474 5505.703900223668 5364.761096060746 0.8956291267523409 1.0154475065441608 0.9163021444546298 1.2176712287045732 1.051301351318713 1.2731196088960297 1.0997558002130254 1.1729827089376879 1.0034052896914911 1.0262719628403236 1.0 12.389298210871726 -3.722081197491031 10.828150891951402 1.0402111991727365 0.6518335070230767 0.0 0.11562942453234765 0.0 0.0 0.015366936872151996 0.0 0.0001896351338382269 3.722081197491031 -0.3883776921496598 (ac)ASEELQKDLEEVK ddPTM_A549_MK2206_60min_R1 1 ASEELQKDLEEVK 13 1 Q9HB71;B2ZWH1;Q9HB71-2 Q9HB71 CACYBP Calcyclin-binding protein 0 94.801 2.0824e-06 1778200.0 1199.8 1371.1 1001.6 1012.3 1394.8 1232.4 1236.7 1088.8 1731.5 2213.7 2130.1 False True 1402.2969077063099 1440.8831335583995 1143.6419409463263 1260.3135454438732 1189.6267676803875 1362.8117499990885 1461.3923818959101 1243.1407343101548 1339.3180146373243 1713.6236325185787 1601.1373822307364 0.8758129834884012 0.8999122433522428 0.7142684654286078 0.7871364190423056 0.7429885660548228 0.8511522903177691 0.912721417983427 0.7764110363710243 0.8364791363320491 1.0702539654224574 1.0 10.644881385245583 -10.575980484256942 0.516388448557074 1.02999965580812 0.8136312509752807 0.6132967141310964 0.06393643343379571 0.8061327795649745 0.3136536421719964 0.08509951065528673 0.015004829433512565 2.6547248537608438e-11 10.575980484256942 -0.21636840483283926 (ac)ASES(ph)SPLLAYR ddPTM_A549_MK2206_60min_R1 1 ASESSPLLAYR 11 0 Q9BXP2;C9JMQ7;C9JBD8;Q9BXP2-2;Q9BXP2-3;Q9BXP2-4 Q9BXP2 SLC12A9 Solute carrier family 12 member 9 1 AS(0.034)ES(0.483)S(0.483)PLLAYR 61.353 0.0018515 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ASESDTEEFY(ph)DAPEDVHLGGGYPVGS(ph)PGK ddPTM_A549_PD325901_60min_R1 1 ASESDTEEFYDAPEDVHLGGGYPVGSPGK 29 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 2 AS(0.153)ES(0.168)DT(0.185)EEFY(0.498)DAPEDVHLGGGY(0.001)PVGS(0.996)PGK 52.82899999999999 0.0022305999999999997 3090300.0 673.81 651.85 649.72 675.91 431.95 836.8 616.21 407.06 612.99 586.65 611.0 True False 742.2146951672947 706.7836871677736 693.8139062837511 717.6594255970139 401.6113221466031 829.9853782401555 639.6602087530507 398.94086896760757 587.2281620301461 549.6088188816844 535.8508734481192 1.385114277021246 1.3189932538874625 1.2947891674024226 1.339289457492127 0.7494833768997988 1.548911123162542 1.1937280322731103 0.7444998015968203 1.0958798261378615 1.0256749519601134 1.0 9.065687746295005 -5.457826963357245 0.3109618345175636 1.0133981414135829 1.6578847738660742 0.2667420532132003 0.21089329909988044 6.661943574216858 0.4944872853486317 0.07663527192485345 1.591012436734433 3.4847613128029537e-06 5.457826963357245 0.6444866324524914 (ac)ASESS(ph)PLLAYR ddPTM_A549_MK2206_60min_R1 1 ASESSPLLAYR 11 0 Q9BXP2;C9JMQ7;C9JBD8;Q9BXP2-2;Q9BXP2-3;Q9BXP2-4 Q9BXP2 SLC12A9 Solute carrier family 12 member 9 1 AS(0.007)ES(0.104)S(0.89)PLLAYR 60.434 0.0026545 398690.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ASESS(ph)PLLAYR ddPTM_A549_PD325901_60min_R1 2 ASESSPLLAYR 11 0 Q9BXP2;C9JMQ7;C9JBD8;Q9BXP2-2;Q9BXP2-3;Q9BXP2-4 Q9BXP2 SLC12A9 Solute carrier family 12 member 9 1 AS(0.007)ES(0.098)S(0.895)PLLAYR;AS(0.007)ES(0.104)S(0.89)PLLAYR 70.977 0.0010470999999999998 1074860.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 96.802 154.5 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 90.68990519966731 135.49747945619376 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.6693106437377478 1.0 7.082122204380649 -10.632928445752034 0.679319263200112 1.082152444714398 6.834839394132852e-26 0.9177693386468225 0.09450196259145188 0.06440817340675754 0.046900237562256634 0.039956722371451286 0.008142451977166855 2.328474864986929e-11 10.632928445752034 -1.082152444714398 (ac)ASGEHS(ph)PGSGAAR ddPTM_A549_MK2206_60min_R1 1 ASGEHSPGSGAAR 13 0 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 1 AS(0.136)GEHS(0.85)PGS(0.013)GAAR 51.726000000000006 0.00037850000000000004 5060200.0 0.0 100.16 117.99 81.828 145.52 114.63 150.34 0.0 0.0 121.32 126.08 True False 0.0 105.25771618205036 134.72275620233324 101.87586367339848 124.1142007691784 126.76007051476424 177.65483196751936 0.0 0.0 93.91372773960063 94.7708563690208 0.0 1.1106549018845582 1.4215631404421087 1.0749703819992091 1.309624134722386 1.337542735935435 1.8745724030999904 0.0 0.0 0.9909557783662662 1.0 6.5663715692423965 -8.272747411463246 24.98130722885887 0.4750000141858103 1.1785053389900533 0.2723386439530536 0.5207822244290613 760.1770620829631 1679353.2543402403 0.09281047956046788 0.11270686166733035 5.336451768046058e-09 8.272747411463246 0.703505324804243 (ac)ASGEHS(ph)PGSGAAR ddPTM_A549_PD325901_60min_R1 1 ASGEHSPGSGAAR 13 0 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 1 AS(0.129)GEHS(0.828)PGS(0.043)GAAR 44.511 7.482e-05 73659000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ASGTAS(ph)RSEDEESLAGQK ddPTM_A549_PD325901_60min_R1 1 ASGTASRSEDEESLAGQK 18 1 F8W126;Q96EZ8-3 F8W126 MCRS1 Microspherule protein 1 1 AS(0.028)GT(0.187)AS(0.392)RS(0.392)EDEESLAGQK 60.161 0.00068089 3103800.0 726.3 1130.6 917.4 717.97 783.88 877.94 756.88 872.32 873.82 1146.4 882.48 True False 800.0334413261991 1225.8796298410455 979.660280774354 762.3173762718234 728.8229730391928 870.7903477200798 785.6834825806279 854.9208932781986 837.0963841909044 1074.0161083541518 773.9405545016303 1.0337143294440372 1.583945462879169 1.26580817489942 0.9849818204225109 0.9417040737818805 1.125138542818466 1.0151729070284465 1.1046337968795479 1.0816029465337198 1.3877242923983373 1.0 9.596078948626003 -6.159838867390761 5.023251174364595 1.0389943038760263 1.3331982107102245 0.21966895235483586 0.1661126437384904 0.12785003209170478 5.023178832653779 0.015922149656461042 0.04353014914234821 6.920877027375471e-07 6.159838867390761 0.29420390683419817 (ac)ASGTASRS(ph)EDEESLAGQK ddPTM_A549_PD325901_60min_R1 1 ASGTASRSEDEESLAGQK 18 1 F8W126;Q96EZ8-3 F8W126 MCRS1 Microspherule protein 1 1 AS(0.04)GT(0.312)AS(0.312)RS(0.335)EDEESLAGQK 74.77199999999999 7.7012e-23 3112100.0 1035.7 1306.7 1084.9 1083.6 1130.9 1265.6 977.25 1120.7 1129.8 1132.3 1322.0 True False 1140.8435015579585 1416.8201948640497 1158.5278380336774 1150.5315109658447 1051.469485393202 1255.293373208343 1014.4397835217189 1098.3467593278579 1082.3184349853325 1060.8063847604726 1159.4023808484676 0.9839927193551841 1.2220262941216318 0.9992456951708603 0.9923487565411665 0.9069064396984602 1.0827072584495652 0.8749678284939669 0.9473387130049462 0.933514069716914 0.914959639796633 1.0 10.179165637983967 -5.979593360157142 24.517533524476164 0.9658547361141557 1.1049162688902436 0.3617766640057217 0.07359224962499661 134.42305000899603 161499.89663156468 0.008895395035353793 0.027652179780823762 1.0481094575795906e-06 5.979593360157142 0.1390615327760879 (ac)ASGVAVSDGVIK ddPTM_A549_MK2206_60min_R1 6 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 0 ;;;;; 104.17 2.59e-14 82020800.0 7427.849999999999 8280.800000000001 7802.61 6616.780000000001 9720.05 8150.41 7770.58 7609.99 11365.23 11618.34 11925.84 False True 8681.489486503006 8702.257349843472 8909.13742496726 8237.891397038542 8290.243521072376 9012.880976395703 9182.393801983277 8688.729387116951 8791.023551542914 8993.748924712425 8964.324791560302 0.9684487887672723 0.9707655124272649 0.993843667216855 0.9189639586457554 0.9248040107691593 1.005416602584627 1.0243263174297612 0.9692564235621162 0.9806676750288491 1.0032823591108417 1.0 13.129979205563568 -7.281257316997468 24.989314363626885 0.9925541445002761 0.956336161207676 0.4283099494822038 0.023706951692807947 727.2368623467219 917003.2108500524 0.0037036470109951545 0.00592505140476405 5.232902982074161e-08 7.281257316997468 -0.036217983292600175 (ac)ASGVAVSDGVIK ddPTM_A549_PD325901_60min_R1 2 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 0 ; 94.69200000000001 1.5505e-15 409310000.0 3232.3 4450.5 3611.7 4107.0 4356.7 3777.5 3739.8999999999996 3638.1 4424.9 3674.1000000000004 4413.3 False True 3560.4407165065068 4825.559254031111 3856.8116809164285 4360.680062326252 4050.7004217990643 3746.7372924261344 3882.223941051804 3565.535241465763 4238.936841004246 3442.1166989741705 3870.4920782137224 0.9198935547620839 1.2467560084138354 0.9964654630416896 1.1266474583094241 1.0465595433200086 0.968026084723392 1.0030311036945712 0.9212098021167633 1.0951932610492683 0.8893227603666218 1.0 11.918301280920325 -6.990580489281884 24.232394690662677 1.0265821230354752 1.080357256676488 0.0726597085549947 0.09627554033779052 299.18165807920906 769656.9758177903 0.012059344958831687 0.0227664462196911 1.0219261459799377e-07 6.990580489281884 0.05377513364101283 (ac)ASHLRPPS(ph)PLLVR ddPTM_A549_MK2206_60min_R1 2 ASHLRPPSPLLVR 13 1 Q8TDB6;Q8TDB6-2 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AS(0.019)HLRPPS(0.981)PLLVR;AS(0.116)HLRPPS(0.884)PLLVR 121.32 7.9779e-26 189314000.0 740.72 530.02 412.91999999999996 709.6800000000001 958.99 276.88 422.98 401.23 704.6 969.12 953.7 True False 865.7354271347042 556.9957541015411 471.4782650315065 883.5516318587457 817.9238413663713 306.1792578219307 499.8299908581972 458.10558121534115 545.0092250149924 750.1951189169291 716.8699692190294 1.207660334938917 0.7769829648581067 0.6576900766887238 1.2325131053003968 1.1409654142123318 0.4271057108941078 0.6972394050802836 0.639035809680254 0.7602623187141385 1.0464870215364228 1.0 9.485567646532516 -5.254209598316164 23.525857914132228 0.8467791981304462 1.20766072918394 0.17351350488471173 0.23129137689631887 529.950989103321 1724367.0512271426 0.031658240703904335 0.4288244617251638 5.569169059628182e-06 5.254209598316164 0.36088153105349385 (ac)ASHLRPPS(ph)PLLVR ddPTM_A549_PD325901_60min_R1 3 ASHLRPPSPLLVR 13 1 Q8TDB6;Q8TDB6-2 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AS(0.088)HLRPPS(0.912)PLLVR;AS(0.169)HLRPPS(0.831)PLLVR;AS(0.002)HLRPPS(0.998)PLLVR 115.63 3.5360999999999993e-31 359424100.0 210.8 361.63 650.99 671.49 608.47 418.35 557.5 666.78 764.11 600.55 809.02 True False 232.20026081724197 392.10582924059554 695.170096120881 712.9664122355625 565.7331663075443 414.94309630350057 578.7159675757055 653.4805498212093 731.997113964102 562.6311705094961 709.5156688003227 0.327265867447093 0.5526387174839756 0.9797811756522617 1.0048635197036233 0.7973511948849676 0.584825839019317 0.8156493126560846 0.9210234228176245 1.0316856218295951 0.7929792043364106 1.0 9.47069073459743 -5.0085943318406265 0.41138345094557566 0.9941738918744227 1.4667088241485638e-167 0.38972130348841627 0.16884832823557602 4.095825776530466 0.39670136392213107 0.0405546932705962 2.0816547502259017 9.804053402020776e-06 5.0085943318406265 -0.9941738918744227 (ac)ASLEVS(ph)RSPRR ddPTM_A549_PD325901_60min_R1 1 ASLEVSRSPRR 11 2 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.5)RS(0.5)PRR 41.996 0.039686 6659800.0 880.54 902.94 1129.4 855.05 1254.4 1080.0 868.89 1102.8 1166.3 1252.8 1215.1 True False 969.9317725807132 979.0339226682061 1206.047875633916 907.8644965405556 1166.295271445072 1071.2048380728595 901.9560844248517 1080.8037888701358 1117.2844669175026 1173.6979941958136 1065.650403153534 0.9101782063896708 0.9187196098936317 1.131748153113732 0.8519346437198829 1.0944445457850944 1.0052122486913988 0.8463902249328029 1.0142198470265287 1.0484530983249012 1.1013912167841715 1.0 10.057518510415836 -8.494896702347784 24.79171013030988 1.0233256914137336 0.9692340102698997 0.13406237585180703 0.08818456306065486 1254.01535245887 1111042.526744794 0.01319944550691497 0.01593690360201326 3.1996560626140205e-09 8.494896702347784 -0.05409168114383389 (ac)ASLEVSRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ASLEVSRSPR 10 1 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.026)RS(0.974)PR;ASLEVSRS(1)PR 131.54 9.5412e-46 1458310000.0 0.0 0.0 119.67 0.0 0.0 113.38 0.0 230.43 0.0 449.14 122.53 True False 0.0 0.0 136.64100546430393 0.0 0.0 125.37779634444712 0.0 263.09415816227886 0.0 347.67896205872273 92.10241934403649 0.0 0.0 1.4835767229294965 0.0 0.0 1.3612866766953735 0.0 2.856539057671495 0.0 3.7749167126654255 1.0 6.525167148378791 -7.222851544906984 24.9219597292138 0.7189590546883406 0.3296838381500168 0.01639048926343445 1.2504447850039084 1540.7723019882012 995108.5443303527 0.1253748418986596 0.21715280790134558 5.986161853511918e-08 7.222851544906984 -0.38927521653832386 (ac)ASLEVSRS(ph)PR ddPTM_A549_PD325901_60min_R1 4 ASLEVSRSPR 10 1 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVSRS(1)PR;ASLEVS(0.002)RS(0.998)PR;ASLEVS(0.177)RS(0.823)PR;ASLEVS(0.137)RS(0.863)PR 164.6 5.0142e-58 1887765000.0 1151.32 1186.3899999999999 1220.76 1150.5 1414.07 1280.05 968.56 1368.04 1107.75 1237.95 1081.6399999999999 True False 1268.2011588430123 1286.3712489360662 1303.608114626226 1221.5637720249208 1314.7506014766695 1269.6256971992257 1005.4190808163684 1340.7533689933807 1061.1951198043926 1159.7856257301312 948.6051370808898 1.3369115444025577 1.3560660791850363 1.374236828020745 1.287747371666147 1.3859830081908546 1.3384132634008303 1.0598920894633885 1.4133945902077183 1.1186900411165515 1.2226221220971878 1.0 9.889663870991086 -8.871081554888345 0.4734807891686468 0.9978678825169766 1.3626903697956698 0.3236904533563336 0.11183336449722636 0.3336039467889064 0.18194393082481897 0.039307141174179376 0.03422316072294356 1.345607642611923e-09 8.871081554888345 0.36482248727869326 (ac)ASLEVSRS(ph)PRR ddPTM_A549_MK2206_60min_R1 4 ASLEVSRSPRR 11 2 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.266)RS(0.734)PRR;ASLEVS(0.173)RS(0.827)PRR;ASLEVS(0.104)RS(0.896)PRR;ASLEVS(0.049)RS(0.951)PRR 117.7 8.1561e-06 1369812000.0 2449.04 2604.5899999999997 1802.9 1722.2089999999998 3568.4800000000005 2100.09 2007.02 2254.46 3571.72 3006.28 2932.64 True False 2862.3780787206697 2737.1525058966304 2058.5783300041235 2144.150282312901 3043.561319136871 2322.320129873082 2371.6695547123227 2574.036608994188 2762.7311228648146 2327.1592600478634 2204.384551253531 1.2984930769420284 1.2416855781084744 0.933856267879171 0.9726752444774767 1.3806852880574487 1.0535004559673975 1.0758873960369866 1.1676894612287376 1.253289096629614 1.055695685548384 1.0 11.106160206299155 -11.06735402051069 1.3988385954850233 1.000484449851044 1.1590473190075288 0.11416883055396343 0.13150642539113971 0.6415258834224282 2.2515642899974324 0.09420068666818707 0.02111865950012158 8.56339504914996e-12 11.06735402051069 0.15856286915648488 (ac)ASLEVSRS(ph)PRR ddPTM_A549_PD325901_60min_R1 6 ASLEVSRSPRR 11 2 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.325)RS(0.675)PRR;ASLEVS(0.091)RS(0.909)PRR;AS(0.014)LEVS(0.242)RS(0.744)PRR;ASLEVS(0.049)RS(0.951)PRR;ASLEVS(0.237)RS(0.763)PRR;ASLEVS(0.302)RS(0.698)PRR 105.99 3.5409e-06 1953418200.0 6181.099999999999 5129.39 6129.49 6241.54 6242.71 6221.320000000001 4967.93 5806.59 6389.8099999999995 6761.37 6976.200000000001 True False 6808.600721714677 5561.661696895769 6545.4740510176525 6627.065750234185 5804.243585780344 6170.655632592073 5156.987294705608 5690.773007268263 6121.268506862837 6334.45594429738 6118.1716257754 1.1128489258180583 0.9090398303743072 1.0698415231508152 1.0831774843181665 0.9486892393354086 1.0085783809325586 0.8428968015509088 0.9301427542982714 1.0005061775440216 1.0353511362137653 1.0 12.57888486233005 -6.77138923837866 24.981606597676414 0.9804163604988507 1.0359717650602145 0.205523244298212 0.06904615576897645 321.03767791149875 806045.9406905834 0.00979470330135748 0.01866699223641642 1.692819922892832e-07 6.77138923837866 0.055555404561363764 (ac)ASPS(ph)LERPEK ddPTM_A549_PD325901_60min_R1 1 ASPSLERPEK 10 1 Q13601-2;Q13601 Q13601-2 KRR1 KRR1 small subunit processome component homolog 1 AS(0.019)PS(0.981)LERPEK 64.439 4.4583e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AT(ph)ATPVPPR ddPTM_A549_PD325901_60min_R1 1 ATATPVPPR 9 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AT(0.625)AT(0.375)PVPPR 61.65 0.00060322 13899000.0 0.0 272.16 230.0 252.0 147.52 180.68 227.89 252.25 113.86 201.29 351.92 True False 0.0 295.0958783456031 245.60918310235581 267.56546766647574 137.15870411637204 179.20860198426308 236.5624786561929 247.2186758637031 109.07486015881574 188.58051504763364 308.6360710046841 0.0 0.9561289365335542 0.7957889766508474 0.8669286995375696 0.4444027027362282 0.5806469781736668 0.7664770935105724 0.801003832957526 0.3534093076151178 0.6110125573908424 1.0 8.269762872611674 -11.097245238344053 1.4408534258630596 0.9993875771835177 0.6064251608277834 0.0 0.2837005115162862 0.4935495690050947 1.8359661378036625 0.18463428413599167 0.04057812001253778 7.993827303720207e-12 11.097245238344053 -0.39296241635573426 (ac)AT(ph)PPKRR ddPTM_A549_MK2206_60min_R1 2 ATPPKRR 7 2 Q9UBK9 Q9UBK9 UXT Protein UXT 1 AT(1)PPKRR;AT(1)PPKRR 51.854 0.0073247 43887000.0 1759.29 2287.2 1828.1100000000001 1853.84 2327.7 1782.2600000000002 1735.29 2071.81 2503.1 3138.7 3006.7 True False 2056.215141489109 2403.608710578929 2087.363487084054 2308.03088322204 1985.2984134855442 1970.8575702315597 2050.5697310424157 2365.495412152023 1936.1518466293312 2429.665490078177 2260.0534093015153 0.909808207640808 1.0635185437152037 0.9235903357386442 1.0212284690808933 0.8784298659999872 0.8720402633496465 0.9073102974483059 1.0466546509107038 0.8566841113846562 1.0750478197013411 1.0 11.142141151295457 -6.75329034000851 24.999976186321685 0.929992777151302 0.9815389577854177 0.003443361802228817 0.07877304354432242 346.6555970066624 1063476.1242861643 0.01029472548705298 0.021139876514231066 1.7648575614383154e-07 6.75329034000851 0.051546180634115646 (ac)AT(ph)PPKRR ddPTM_A549_PD325901_60min_R1 2 ATPPKRR 7 2 Q9UBK9 Q9UBK9 UXT Protein UXT 1 AT(1)PPKRR;AT(1)PPKRR 51.854 0.0080284 78085000.0 2963.3 2846.8999999999996 3903.7 4363.7 3624.7 4153.0 3705.9 4123.9 4145.299999999999 3518.9 4844.6 True False 3264.1320345338404 3086.8182541964193 4168.628556855071 4633.235838318252 3370.1135765361573 4119.179344922761 3846.930052446292 4041.645579363036 3971.0874566690545 3296.7160534607688 4248.744912449684 0.7682579448272527 0.7265247309038054 0.9811435242064412 1.090495177703404 0.7932021446288858 0.9695049784826408 0.9054273983768728 0.9512563504389719 0.934649534979839 0.7759270376060285 1.0 12.052821013911998 -5.761412281494035 24.999999999227082 0.9601111128441483 0.7473912757793137 0.37049952421106214 0.08815893153286594 0.33107728236022543 303392.35060741566 0.009078590760144011 0.031186776534480272 1.7321588556953275e-06 5.761412281494035 -0.21271983706483455 (ac)AT(ph)S(ph)PQKSPSVPK ddPTM_A549_MK2206_60min_R1 1 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 AT(0.669)S(0.669)PQKS(0.607)PS(0.055)VPK 48.64 0.0032286000000000003 15392000.0 2819.4 2712.1 2401.5 2588.6 3689.4 2696.1 2664.6 2495.7 4225.4 3956.4 4556.5 True False 3295.245792288021 2850.134305684291 2742.068811084865 3222.8071162066703 3146.6941473186275 2981.3995124736616 3148.7233288589346 2849.4731177607027 3268.353646577273 3062.6464921608626 3424.9952969974906 0.9621168809127376 0.8321571443274245 0.8006051317760026 0.9409668734529161 0.9187440782990753 0.8704828047756137 0.9193365408762024 0.8319640964934121 0.9542651487558138 0.894204583242996 1.0 11.741886291712461 -8.94698017679714 4.7730125529762475 0.9806138520938334 0.8836914792707958 0.17411914204879086 0.05422742324881955 0.13233932080880742 5.917785963790828 0.008497187563798888 0.008854036659197248 1.1298474849452279e-09 8.94698017679714 -0.09692237282303762 (ac)AT(ph)SATSPHAPGFPAEGR ddPTM_A549_PD325901_60min_R1 1 ATSATSPHAPGFPAEGR 17 0 Q9NUP7;Q5VVL2;Q9NUP7-2 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 AT(0.469)S(0.469)AT(0.036)S(0.027)PHAPGFPAEGR 67.952 4.2997e-09 6384300.0 1208.7 889.52 973.5 1086.4 1485.2 1320.9 1227.9 1436.7 1152.7 1333.3 1355.4 True False 1331.4063342020884 964.4829721707115 1039.5675641310586 1153.504460606583 1380.8846756618475 1310.1430283429986 1274.6284064326614 1408.043891430653 1104.2560276222277 1249.1152104575979 1188.6943925885116 1.120057722576453 0.8113800975122333 0.8745456953551256 0.9703961487482929 1.1616818286278112 1.1021697725771376 1.072292772961618 1.18452976661603 0.928965455298893 1.0508295641384438 1.0 10.215162137703153 -4.9606436819357596 21.59018060239785 0.9931730266259229 2.0177397303054496 0.03381098032435215 0.11212259453019885 1236.6547294514148 438554.5336573849 0.01570993550904001 90863.76310828314 1.0948542739811173e-05 4.9606436819357596 1.0245667036795267 (ac)AT(ph)SPQKS(ph)PSVPK ddPTM_A549_PD325901_60min_R1 1 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 AT(0.724)S(0.289)PQKS(0.959)PS(0.028)VPK 73.92699999999999 3.9026999999999996e-13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AT(ph)SPQKSPSVPK ddPTM_A549_MK2206_60min_R1 2 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 AT(0.496)S(0.496)PQKS(0.008)PS(0.001)VPK;AT(0.492)S(0.492)PQKS(0.015)PS(0.002)VPK 45.973 1.5105e-05 18686900.0 8161.8 9854.599999999999 10534.2 9087.099999999999 14256.0 9610.2 8628.0 8071.0 16001.7 14389.4 15867.599999999999 True False 9539.312303148316 10356.157047600167 12028.10796157826 11313.439907935415 12158.961284809011 10627.144985265535 10195.595917359025 9215.088966400868 12377.34049946409 11138.824546127671 11927.236996518674 0.7997922994179334 0.8682779633391142 1.0084571946620184 0.9485381996884598 1.0194281616402838 0.8909980566637009 0.8548162428846614 0.7726088589579105 1.03773744942578 0.9338981483623471 1.0 13.541972253840513 -8.82705858040905 24.999999218019937 1.0178206596853876 0.9026394794916953 0.20639701257711152 0.07733630322140383 49.40455215717103 18821.932250854512 0.013324679493668364 0.014185202045292857 1.4891601967400224e-09 8.82705858040905 -0.11518118019369228 (ac)AT(ph)SPQKSPSVPK ddPTM_A549_PD325901_60min_R1 1 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 AT(0.578)S(0.42)PQKS(0.002)PSVPK 74.32600000000001 1.0231999999999999e-14 20402000.0 5777.8 5770.8 6360.8 7289.9 7709.9 9832.5 8537.6 8746.2 7611.3 7484.1 7875.7 True False 6364.358002608447 6257.12556862436 6792.482138597678 7740.180566435877 7168.383221711064 9752.427379954985 8862.503039953985 8571.750179738836 7291.42353000873 7011.552648755503 6907.038828175698 0.9214307550504122 0.9059056600492582 0.9834145004208299 1.1206221304072546 1.0378374003732642 1.4119549089795427 1.2831118023835937 1.2410166488093748 1.0556511569422518 1.015131494578178 1.0 12.75385161849827 -6.060210549945965 3.1704756164508674 1.0938987412684935 0.9152128442270567 0.29875082253182494 0.12773623324363695 0.3234196727267991 6.373254290448335 0.021107390446050884 0.0671858023956092 8.705414411626966e-07 6.060210549945965 -0.17868589704143678 (ac)AT(ph)SPQKSPSVPKS(ph)PTPK ddPTM_A549_PD325901_60min_R1 1 ATSPQKSPSVPKSPTPK 17 2 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 AT(0.518)S(0.428)PQKS(0.22)PS(0.397)VPKS(0.423)PT(0.014)PK 52.483000000000004 0.00012616 9874800.0 4135.5 5010.9 4635.1 4434.3 5469.9 5349.8 4658.4 5470.6 5971.0 6319.3 8272.5 True False 4555.332915605808 5433.18612875508 4949.665759120562 4708.196639974017 5085.71309413058 5306.233002520536 4835.677961174293 5361.484591397322 5720.059634711829 5920.298319541518 7255.034943698145 0.6278857305246549 0.7488849014399915 0.6822387207686618 0.6489557495603301 0.700990847542109 0.7313862777641927 0.6665271771536608 0.7390018977171716 0.7884262004389623 0.8160261618979515 1.0 12.824766847676177 -9.957487952518195 0.43878293929135626 1.0301104738482412 0.6755760721563313 0.5986364546161012 0.0624788588645219 0.2272670042109035 0.08405010728815054 0.033991492223305275 0.010790055994375113 1.1028388265624866e-10 9.957487952518195 -0.35453440169190986 (ac)AT(ph)TGTPTADRGDAAATDDPAAR ddPTM_A549_MK2206_60min_R1 1 ATTGTPTADRGDAAATDDPAAR 22 1 Q86TI2-4;Q86TI2 Q86TI2-4 DPP9 Dipeptidyl peptidase 9 1 AT(0.323)T(0.323)GT(0.323)PT(0.03)ADRGDAAATDDPAAR 48.625 0.0027447 5446300.0 0.0 0.0 0.0 0.0 0.0 139.68 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 154.46084488792008 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AT(ph)TGTPTADRGDAAATDDPAAR ddPTM_A549_PD325901_60min_R1 2 ATTGTPTADRGDAAATDDPAAR 22 1 Q86TI2-4;Q86TI2 Q86TI2-4 DPP9 Dipeptidyl peptidase 9 1 AT(0.316)T(0.316)GT(0.316)PT(0.051)ADRGDAAAT(0.002)DDPAAR;AT(0.315)T(0.315)GT(0.315)PT(0.053)ADRGDAAAT(0.003)DDPAAR 41.092 0.00052201 16033400.0 215.83 264.0 288.52 372.1 369.29 476.41999999999996 361.3 328.76 211.09 294.83 484.73 True False 237.74090271435173 286.2482065080807 308.1007022117029 395.08377189958543 343.35234438133836 472.54019347654753 375.0494692109461 322.2026238927694 202.21862138524867 276.2143834839974 425.1112829566394 0.5592439256395857 0.6733488805971719 0.724753057761416 0.9293655278960998 0.8076763853298142 1.1115682232427262 0.8822383320491648 0.7579253640408163 0.4756839667458899 0.6497460654606309 1.0 8.731696740094018 -5.613155420107598 2.0860242010280627 0.7962501501427208 0.5642683453417007 0.19225679720777433 0.16373257422780946 0.7194367542945534 5.336812045334919 0.030508672273643653 0.23888648815508798 2.436938559916973e-06 5.613155420107598 -0.23198180480102015 (ac)ATAAETS(ph)AS(ph)EPEAESK ddPTM_A549_PD325901_60min_R1 1 ATAAETSASEPEAESK 16 0 A0A494C0L2;F8W667;A0A499FI31;Q15020-3;Q15020-2;Q15020-4;Q15020 A0A494C0L2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 2 AT(0.351)AAET(0.364)S(0.415)AS(0.87)EPEAESK 62.376999999999995 1.3803e-10 1837400.0 458.66 370.19 302.05 405.34 287.4 473.55 323.98 453.74 398.94 433.37 243.5 True False 505.2228255523538 401.3872104819179 322.5489293742027 430.3769312060684 267.2140154761749 469.6935658050019 336.3092361886586 444.68979974785594 382.17393915122045 406.0069442406133 213.55104367367758 2.3658176371377193 1.8795844008857594 1.5104067103838756 2.0153351807716633 1.251288735841996 2.1994440192141127 1.5748423908551108 2.0823583537590955 1.789614007858522 1.901217326106929 1.0 7.738437138558617 -10.517391897324595 0.6581179407867899 0.9430420657113278 1.8472959305718153 0.0 0.40394918552592707 0.525696615262244 0.3747661623353009 0.2610425028801354 0.05955363589744171 3.0381422388591276e-11 10.517391897324595 0.9042538648604875 (ac)ATAAETS(ph)ASEPEAESK ddPTM_A549_PD325901_60min_R1 1 ATAAETSASEPEAESK 16 0 A0A494C0L2;F8W667;A0A499FI31;Q15020-3;Q15020-2;Q15020-4;Q15020 A0A494C0L2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 1 AT(0.023)AAET(0.1)S(0.869)AS(0.008)EPEAESK 103.21 1.8320999999999998e-28 18731000.0 1105.8 1364.7 1223.1 1642.4 1439.8 1240.1 1567.9 1533.7 1675.3 1345.3 1403.4 True False 1218.0600019530648 1479.7080584150658 1306.106921097789 1743.8473178389652 1338.6734150403497 1230.0010367538441 1627.5672924878013 1503.1091503356254 1604.892967012682 1260.357528409666 1230.7906968855807 0.989656490770746 1.20224182889857 1.061193364885508 1.4168512341307373 1.0876531797223994 0.9993584123330354 1.3223753613073552 1.2212548844731481 1.303952793170876 1.0240226316293273 1.0 10.265369728662495 -5.253198262946949 23.29257560638215 1.1642597110026138 0.989656261226032 0.11949765516639577 0.13596110853589036 717.4954881777296 2027791.7189113244 0.019788943882065056 0.29152490717229157 5.5821530161395905e-06 5.253198262946949 -0.17460344977658182 (ac)ATAAETSAS(ph)EPEAESK ddPTM_A549_MK2206_60min_R1 2 ATAAETSASEPEAESK 16 0 A0A494C0L2;F8W667;A0A499FI31;Q15020-3;Q15020-2;Q15020-4;Q15020 A0A494C0L2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 1 ATAAET(0.002)S(0.204)AS(0.794)EPEAESK;ATAAET(0.003)S(0.374)AS(0.623)EPEAESK 144.68 8.635399999999998e-78 33220000.0 1189.73 1456.06 1290.74 1525.3899999999999 1731.75 1338.7 1220.31 1565.9 1748.33 1950.22 2137.09 True False 1390.5273378941718 1530.1672346648984 1473.7863407119216 1899.110618477359 1477.0118690353536 1480.3603454428596 1442.0245310515065 1787.8711203676255 1352.3360465093126 1509.663947513386 1606.3915723165514 0.8656216590385336 0.9525493416641055 0.917451489481234 1.182221477755067 0.9194594235236049 0.9215438943744306 0.8976793428839932 1.1129734189213687 0.8418470750311088 0.9397857742345621 1.0 10.649607890208198 (ac)ATAAETSAS(ph)EPEAESK ddPTM_A549_PD325901_60min_R1 1 ATAAETSASEPEAESK 16 0 A0A494C0L2;F8W667;A0A499FI31;Q15020-3;Q15020-2;Q15020-4;Q15020 A0A494C0L2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 1 ATAAET(0.003)S(0.201)AS(0.796)EPEAESK 116.96 1.7312999999999997e-35 17790000.0 976.37 1113.4 1053.2 767.3 857.18 1275.5 854.04 784.3 1063.1 1132.4 1071.3 True False 1075.4903636343959 1207.2301254776405 1124.6764854060923 814.6943783352644 796.9746339104647 1265.1127508906777 886.5409595486204 768.656521228553 1018.4216040298347 1060.9000707434077 939.5368915302286 1.1447026437490275 1.2849204074482041 1.1970540971247292 0.8671233515997094 0.8482632678876804 1.346528020661522 0.9435935592744066 0.8181227668204046 1.083961271995532 1.1291734047989477 1.0 9.875806000896134 -6.11198105631152 8.058276792873247 1.0168653103250263 1.2211503976817961 0.2796336497161196 0.14514464810371838 0.27196208719846987 17.61027638877798 0.019163776668932354 0.05101175305778828 7.727142897365654e-07 6.11198105631152 0.20428508735676987 (ac)ATAEVLNIGK ddPTM_A549_PD325901_60min_R1 1 ATAEVLNIGK 10 0 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 51.995 2.001e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ATAT(ph)PVPPR ddPTM_A549_MK2206_60min_R1 2 ATATPVPPR 9 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AT(0.036)AT(0.964)PVPPR;AT(0.022)AT(0.978)PVPPR 61.65 0.00060322 21083200.0 145.92 204.92 402.76 168.03 427.2 230.6 175.15 243.65 176.41 396.13 418.17999999999995 True False 170.5477285985203 215.34955271591215 459.87742425673116 209.19735754315337 364.3594459084179 255.00193894010854 206.97248782167767 278.1881336468305 136.45341666888277 306.6439578757668 314.33436481913964 0.5425678757607344 0.6850970712025682 1.4630198785975357 0.6655249344548136 1.159146077197323 0.8112442274227015 0.6584468991825461 0.885007065030555 0.4341027642567645 0.9755343105810345 1.0 8.296156194154415 -7.517017841290483 23.659720556396685 0.7347588923306643 0.9165049806657333 0.018537139462939112 0.27977922891461837 285.66875515912693 1153208.7482719729 0.045449670018766625 0.06872468407475955 3.040760105372313e-08 7.517017841290483 0.181746088335069 (ac)ATAT(ph)PVPPR ddPTM_A549_PD325901_60min_R1 2 ATATPVPPR 9 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AT(0.022)AT(0.978)PVPPR;AT(0.128)AT(0.872)PVPPR 61.65 4.8346999999999996e-05 23645000.0 0.0 233.6 156.74 146.9 173.68 149.51 0.0 0.0 124.89 125.62 240.32 True False 0.0 253.28629181927133 167.37731895418807 155.9736793658939 161.48131596347275 148.29244012988252 0.0 0.0 119.64130761667396 117.68833176155671 210.7621635139966 0.0 1.2017635784159653 0.7941525943914152 0.7400459207923047 0.766177919561681 0.7036008629700488 0.0 0.0 0.5676602746048801 0.5583940200620549 1.0 7.7194720842158215 -10.383246562021125 1.0757408492456297 0.9670813078780963 0.554170736472753 0.015123515987970348 0.389451102580545 0.66808206384756 1.512415224222176 0.1687819615444693 0.06892902193180944 4.137647014771516e-11 10.383246562021125 -0.4129105714053434 (ac)ATDELATKLS(ph)R ddPTM_A549_MK2206_60min_R1 1 ATDELATKLSR 11 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ATDELATKLS(1)R 109.72 2.9013e-24 11646000.0 2652.1 2956.6 2506.4 2761.2 4050.8 2672.9 2523.8 3375.8 3970.5 4053.7 4636.7 True False 3099.709642380317 3107.078311340357 2861.845208454345 3437.6941239549787 3454.932686062314 2955.744503872576 2982.3417914036527 3854.3299879539118 3071.1880895856193 3137.9663545830786 3485.2794235900906 0.8893719170405543 0.8914861432085238 0.8211236060684158 0.9863467762977536 0.9912928824809929 0.8480652896484107 0.8556966110716094 1.10588837206736 0.8811884834249739 0.9003485727267014 1.0 11.767058609871311 -14.999999999999998 0.2765504742524399 1.618324206651371 0.9071346610070213 0.0 0.08253295225972002 68.97719243024895 0.9063709346300347 23.749226594065814 0.03268913481871792 1.000000000000004e-15 14.999999999999998 -0.7111895456443497 (ac)ATDELATKLS(ph)R ddPTM_A549_PD325901_60min_R1 2 ATDELATKLSR 11 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ATDELAT(0.001)KLS(0.999)R;ATDELAT(0.008)KLS(0.992)R 94.402 1.6760000000000003e-19 35678000.0 7668.9 8282.9 9249.5 9421.6 8429.8 8511.7 8802.099999999999 8486.2 8827.4 8737.1 8322.6 True False 8447.441082454208 8980.929051840078 9877.22669176192 10003.550833993906 7837.7199292312425 8442.383537245147 9137.06873219394 8316.936083704892 8456.415076110401 8185.438014917188 7298.9729613082045 1.157346537277782 1.2304373641946489 1.353235139261512 1.3705422512211851 1.0738113390444013 1.1566536253796462 1.2518293711498134 1.1394666246597844 1.1585760244540961 1.1214506559084583 1.0 12.833477761275585 -10.427731842754469 0.23163408709502126 0.8853528729119122 1.2761483994462137 0.31962790774697003 0.08764122896315898 3.1021015507259713 0.2664410535187671 0.3608578139884689 0.08366552270455495 3.734806940912268e-11 10.427731842754469 0.3907955265343015 (ac)ATDT(ph)SQGELVHPK ddPTM_A549_MK2206_60min_R1 1 ATDTSQGELVHPK 13 0 Q5SSJ5;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 AT(0.013)DT(0.551)S(0.436)QGELVHPK 50.145 0.0021246 9216500.0 973.52 979.18 985.11 862.27 1361.6 969.48 960.89 1223.8 1557.2 1542.5 1462.8 True False 1137.8263757211585 1029.0160795840663 1124.8134109880548 1073.5261887087709 1161.3104437006127 1072.0697301112593 1135.471275038377 1397.2773977303152 1204.4966863374195 1194.048178687225 1099.546388773823 1.0348143446590043 0.9358550854153505 1.0229794963379477 0.976335514053146 1.0561723048316922 0.9750109145524958 1.0326724607814102 1.2707762146247523 1.0954487219776452 1.0859461600513163 1.0 10.10269275601475 -8.001152537887672 24.97977839555182 1.0674727176498897 1.00010535493699 0.2814184331340992 0.07211296755920668 68.64484802871411 1487815.0249061782 0.012561597916200316 0.01722799000302466 9.97349701698943e-09 8.001152537887672 -0.06736736271289967 (ac)ATEAQS(ph)EGEVPAR ddPTM_A549_PD325901_60min_R1 2 ATEAQSEGEVPAR 13 0 Q14CB8-6;Q14CB8-7;Q14CB8;Q14CB8-2;R4GNI4;Q14CB8-5 Q14CB8-6 ARHGAP19 Rho GTPase-activating protein 19 1 AT(0.016)EAQS(0.984)EGEVPAR;AT(0.008)EAQS(0.992)EGEVPAR 55.261 5.2804e-05 2090900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ATEIGS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 ATEIGSPPR 9 0 Q9C0J8;B9A053;Q9C0J8-3;Q9C0J8-2 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 AT(0.001)EIGS(0.999)PPR;AT(0.006)EIGS(0.994)PPR 91.65799999999999 1.4907e-05 46836000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ATEIGS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 ATEIGSPPR 9 0 Q9C0J8;B9A053;Q9C0J8-3;Q9C0J8-2 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 AT(0.002)EIGS(0.998)PPR;AT(0.001)EIGS(0.999)PPR 96.113 1.3594e-05 55003000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ATFVELSTK ddPTM_A549_MK2206_60min_R1 3 ATFVELSTK 9 0 O60218;C9JRZ8 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ;; 49.418 0.0016167000000000002 8403300.0 773.1800000000001 603.35 649.3 487.81000000000006 733.01 616.88 654.29 425.16999999999996 1065.01 1049.67 1221.21 False True 903.6738815638979 634.0579378837868 741.380503450928 607.3234718986231 625.1852000124755 682.157832148197 773.1660237330602 485.4391495285161 823.7869354714974 812.5488179725238 917.9498533186226 0.9844479829664841 0.6907326534140246 0.8076481528600377 0.6616085505139458 0.6810668336099971 0.7431319147576774 0.84227479413812 0.5288297043390006 0.8974204119030007 0.8851777850772053 1.0 9.8422715325809 -8.968276099755588 13.694741765711466 0.9547773916057855 0.7397352961699839 0.3537577387750752 0.11214439558625545 0.9166539088362788 395.16976734790325 0.018346045021873977 0.019257084773650426 1.075781075701313e-09 8.968276099755588 -0.21504209543580155 (ac)ATFVELSTK ddPTM_A549_PD325901_60min_R1 2 ATFVELSTK 9 0 O60218;C9JRZ8 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 49.418 0.0016167000000000002 15746900.0 348.39 392.53999999999996 421.76 391.44 471.82000000000005 388.13 444.99 345.9 439.12 352.78 448.33000000000004 False True 383.7582963288373 425.62072341924966 450.3831698489116 415.61835977525874 438.68099089063594 384.96919796409117 461.9243379578716 339.0007531466994 420.66531348093423 330.50541059418873 393.18825219802835 0.9760166896735213 1.0824858602461163 1.1454644622039145 1.0570467389395284 1.115702181940307 0.9790963891011737 1.1748172418061578 0.8621843385492669 1.069882711727275 0.8405780405354798 1.0 8.61907640680205 (ac)ATNFLAHEK ddPTM_A549_MK2206_60min_R1 1 ATNFLAHEK 9 0 P29692;E9PK01;P29692-4;P29692-3;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;E9PK72;E9PJD0;E9PKK3;E9PNW6 P29692 EEF1D Elongation factor 1-delta 0 48.79600000000001 0.0019328 4585300.0 624.84 659.74 581.73 549.91 878.47 515.97 629.05 635.47 878.82 962.2 996.8 False True 730.2977161286972 693.3179480226232 664.2280614084527 684.6379746863981 749.2482267021719 570.5696029268337 743.3402424449121 725.5498185452556 679.7686731871636 744.8383517230776 749.2670497195425 0.9746828135603378 0.9253282234713758 0.8865037661232793 0.9137436044233687 0.9999748780926939 0.7615036630002656 0.992089859981366 0.9683460907787624 0.9072448514072616 0.994089292998908 1.0 9.549336197697384 -10.953977451983079 0.727176562377081 1.011938612386665 0.9225202666548475 0.16168563781498846 0.06265945981835833 1.4119573117441395 1.018384026433551 0.08148579026079178 0.011272285510107482 1.1117894484767411e-11 10.953977451983079 -0.0894183457318174 (ac)ATNFLAHEK ddPTM_A549_PD325901_60min_R1 2 ATNFLAHEK 9 0 P29692;E9PK01;P29692-4;P29692-3;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;E9PK72;E9PJD0;E9PKK3;E9PNW6 P29692 EEF1D Elongation factor 1-delta 0 ; 48.79600000000001 0.0017216999999999998 12648500.0 2170.4 2094.2 2042.42 2258.8999999999996 2617.0 1758.85 2028.48 2671.7 2651.9 2118.0 2627.3 False True 2390.7374102359686 2270.6855835955394 2181.030903269189 2398.4271226658802 2433.190948159882 1744.5265087448595 2105.6749164268467 2618.410847591895 2540.4498652306634 1984.2691185398592 2304.1587558269107 1.0375749518951818 0.9854727144357036 0.9465627738339002 1.0409122707368046 1.0559996970723766 0.7571207948815091 0.9138584357965245 1.136384739536841 1.102549838984056 0.8611685776953982 1.0 11.17002440610974 -8.249019515886435 24.862710250935205 1.0563762843912492 0.9614835844669841 0.049408458412485534 0.10254941773304264 893.209695237009 1788073.8601501659 0.014548651419322092 0.018718024231144718 5.636123282157902e-09 8.249019515886435 -0.09489269992426508 (ac)ATS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 ATSPQK 6 0 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 AT(0.435)S(0.565)PQK 47.067 0.030411 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ATS(ph)PQKS(ph)PSVPK ddPTM_A549_MK2206_60min_R1 1 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 AT(0.472)S(0.542)PQKS(0.883)PS(0.103)VPK 50.563 0.0014452 13498000.0 2310.2 3279.3 3198.5 2430.4 3738.5 2328.9 2612.8 2820.8 4061.2 2956.0 3351.1 True False 2700.105281032767 3446.202362977214 3652.0953954840493 3025.848109104801 3188.571602361003 2575.342652201295 3087.5119393689956 3220.6570383376984 3141.3446844037544 2288.237546968839 2518.929384345064 1.0719257545740248 1.3681218633579304 1.4498601740015093 1.2012437219995902 1.2658439820416203 1.0223957321736905 1.225723896254347 1.2785817094968255 1.24709517619944 0.9084167111591315 1.0 11.298594962794908 -13.883294053520844 0.24862152343617466 0.17679535360233345 1.2694806285320221 0.46082072930631957 0.11603857661872484 19.989607437818325 0.4186927243800643 8.141228461902264 0.062420908748000874 1.3082957978674755e-14 13.883294053520844 1.0926852749296887 (ac)ATS(ph)PQKS(ph)PSVPK ddPTM_A549_PD325901_60min_R1 1 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 AT(0.445)S(0.685)PQKS(0.844)PS(0.026)VPK 52.576 1.7379e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ATS(ph)PQKSPSVPK ddPTM_A549_PD325901_60min_R1 1 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 AT(0.48)S(0.519)PQKS(0.001)PSVPK 79.492 2.3988e-16 19002000.0 7439.3 6699.7 7466.6 8656.4 10013.0 11241.0 8951.0 9456.6 10148.0 7814.3 8057.2 True False 8194.532259476795 7264.307231599195 7973.328376313266 9191.0861678892 9309.721422974742 11149.45702294167 9291.635203175148 9267.98069444081 9721.5148506206 7320.9037644032205 7066.215478798991 1.1596776639579038 1.028033641684795 1.1283732289562802 1.3007084478906044 1.3174975276238063 1.577854094089512 1.3149379934780026 1.3115904436041967 1.3757739032709086 1.0360430963884952 1.0 12.786722028435628 -4.325649809481822 12.441346841390555 1.2229256582382844 1.2109224735702273 0.0 0.16954559730725183 0.0 0.0 0.02605605029400238 12346511.667754078 4.724438397194022e-05 4.325649809481822 -0.012003184668057054 (ac)ATS(ph)PQKSPSVPKS(ph)PTPKS(ph)PPSR ddPTM_A549_PD325901_60min_R1 1 ATSPQKSPSVPKSPTPKSPPSR 22 3 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 3 AT(0.451)S(0.477)PQKS(0.274)PS(0.202)VPKS(0.563)PT(0.445)PKS(0.498)PPS(0.089)R 41.434 0.00024912 12718000.0 2951.2 2634.1 2780.5 2692.3 3411.3 3259.9 2814.7 3217.8 3998.9 4639.9 4764.2 True False 3250.8036514413866 2856.0848513747524 2969.2014505047855 2858.597256343063 3171.7020563461215 3233.3524552163985 2921.8149487629403 3153.618454684732 3830.840139549346 4346.9359221497125 4178.23360275209 0.7780330064121284 0.6835627499366064 0.7106355778071032 0.6841640578593264 0.7591011795647344 0.7738563140860952 0.6992943015054064 0.7547731301111381 0.9168563808940877 1.040376468966815 1.0 12.028677439611524 -8.838091006972274 1.8898515644850917 0.9695526277095704 0.7239048051879783 0.8883174402798005 0.0404836779437098 0.0688744195833372 0.48293632837962414 0.007366295923320559 0.007731996828389418 1.4518073575939998e-09 8.838091006972274 -0.24564782252159212 (ac)ATSAT(ph)SPHAPGFPAEGR ddPTM_A549_MK2206_60min_R1 1 ATSATSPHAPGFPAEGR 17 0 Q9NUP7;Q5VVL2;Q9NUP7-2 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 AT(0.026)S(0.026)AT(0.534)S(0.414)PHAPGFPAEGR 74.816 1.2946e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ATSATS(ph)PHAPGFPAEGR ddPTM_A549_MK2206_60min_R1 1 ATSATSPHAPGFPAEGR 17 0 Q9NUP7;Q5VVL2;Q9NUP7-2 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 AT(0.083)S(0.083)AT(0.144)S(0.69)PHAPGFPAEGR 58.83 1.9721e-06 4266300.0 600.31 760.7 654.04 539.0 1428.9 891.74 609.96 810.46 1022.0 1047.3 1208.8 True False 701.6276518296171 799.4163807875968 746.7927067257734 671.0550241966296 1218.7107028523835 986.103334910895 720.7818365498745 925.3451869296543 790.5186317986404 810.7142026185606 908.6215988171983 0.7721890528939259 0.8798122142685582 0.8218962742002982 0.7385417923921004 1.3412741942727808 1.0852739316284785 0.7932695387036308 1.0184054485764218 0.8700196350468677 0.8922462372388142 1.0 9.827535789838212 (ac)ATSATS(ph)PHAPGFPAEGR ddPTM_A549_PD325901_60min_R1 1 ATSATSPHAPGFPAEGR 17 0 Q9NUP7;Q5VVL2;Q9NUP7-2 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 AT(0.008)S(0.008)AT(0.054)S(0.929)PHAPGFPAEGR 70.78399999999999 1.2696999999999999e-06 5888900.0 1168.5 867.0 1095.0 1308.6 1716.7 2194.6 906.35 1079.7 1233.9 1268.1 1631.1 True False 1287.1252597957646 940.0651327367641 1169.3132847699114 1389.4292499537696 1596.124914293491 2176.727905217311 940.8416452237508 1058.1645364917358 1182.0434740028352 1188.0319495847 1430.4850403948071 0.8997823978924827 0.6571653014122473 0.8174243363266396 0.9712993919672824 1.1157928039939293 1.5216712120362648 0.657708133014857 0.739724293935774 0.8263235480439535 0.8305098732502709 1.0 10.48228869510817 -6.140871351688557 4.658455170155145 0.9449297864553776 0.7702283121135243 0.09804997340515487 0.22306660790100763 0.4349253919505419 14.65496302957656 0.031901436668817174 0.08832582123279448 7.229839368503021e-07 6.140871351688557 -0.17470147434185335 (ac)ATSPQKS(ph)PSVPK ddPTM_A549_PD325901_60min_R1 2 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 AT(0.117)S(0.125)PQKS(0.75)PS(0.008)VPK;AT(0.025)S(0.07)PQKS(0.892)PS(0.013)VPK 82.54299999999999 2.3295e-14 140486000.0 12883.8 12271.2 12101.2 12586.5 13963.599999999999 12358.099999999999 13382.8 13706.8 13818.900000000001 12711.3 13496.5 True False 14191.753891447735 13305.337089780138 12922.460202427077 13363.939518984502 12982.84490780485 12257.459730914992 13892.089777349149 13433.40712122342 13238.13968951922 11908.706348675974 11836.516061362576 1.1989806644011796 1.1240923444705297 1.091745251342099 1.1290433307996621 1.0968468120601962 1.0355631393029985 1.1736637457618542 1.134912253874559 1.1184152178639712 1.0060989472695472 1.0 13.530956882760174 -10.574689680555343 0.6964605309001989 0.9924669204592679 1.1213192412116744 0.5611697333242021 0.040563749531720504 0.494588116248923 0.39346523859865673 0.03644614334692015 0.008173463760765201 2.6626269255032372e-11 10.574689680555343 0.1288523207524065 (ac)ATTATMATS(ph)GSAR ddPTM_A549_PD325901_60min_R1 1 ATTATMATSGSAR 13 0 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 ATTAT(0.001)MAT(0.081)S(0.459)GS(0.459)AR 56.951 1.582e-08 773360.0 0.0 0.0 0.0 138.36 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 146.90618296164115 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)ATTATMATSGS(ph)AR ddPTM_A549_MK2206_60min_R1 4 ATTATMATSGSAR 13 0 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 ATTATMAT(0.002)S(0.1)GS(0.899)AR;ATTATMAT(0.011)S(0.137)GS(0.852)AR;ATTAT(0.001)MAT(0.044)S(0.271)GS(0.684)AR;ATTATMAT(0.016)S(0.116)GS(0.868)AR 118.58 6.63e-26 78827400.0 433.95 538.0699999999999 209.95 138.78 935.59 637.47 226.38 428.74 686.788 718.53 917.92 True False 507.19015094111745 565.4554647172109 239.72406699448985 172.78110623007092 797.9659503685791 704.9266522816606 267.5103156898164 489.5152079611829 531.2316145750732 556.2135739592419 689.9751306967925 0.7350846840362434 0.819530211394965 0.3474387065985946 0.25041642595955976 1.1565140754605587 1.0216696528899076 0.3877100837238336 0.7094679013529531 0.7699286408172317 0.8061356840463694 1.0 9.43040055243799 -10.937939332026517 0.24824257183493165 1.21006527507421 0.6216480147404414 0.07287695231198976 0.2675319553876225 8.30008445665593 0.6168439513881003 1.4756508723489632 0.20654271740442734 1.1536143986195713e-11 10.937939332026517 -0.5884172603337686 (ac)ATTATMATSGS(ph)AR ddPTM_A549_PD325901_60min_R1 3 ATTATMATSGSAR 13 0 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 ATTATMAT(0.001)S(0.017)GS(0.982)AR;ATTATMAT(0.001)S(0.086)GS(0.913)AR;ATTAT(0.001)MAT(0.063)S(0.32)GS(0.617)AR 113.37 1.2005000000000002e-23 114340600.0 335.464 633.26 625.4100000000001 552.64 425.59000000000003 313.59000000000003 703.1499999999999 647.36 610.19 780.19 422.72 True False 369.5200583244556 686.6270426261632 667.8540834958454 586.775317663496 395.6980266057943 311.0362270104331 729.9087580284437 634.4478969559045 584.5458362928844 730.9286702519416 370.7281198428623 0.9967413814767577 1.8521040241490139 1.8014659470096943 1.5827645281189027 1.0673536897430813 0.8389874152040844 1.9688518862227782 1.7113562824013 1.5767507372806016 1.9716029918684204 1.0 8.534217737948378 -10.707099305425887 0.9863179828015181 1.0025642966697859 1.501017380389746 0.0 0.4537723227611496 0.6973331848398697 1.2159453988974687 0.23942261281497812 0.06382886840107707 1.962911387782248e-11 10.707099305425887 0.4984530837199601 (ac)ATTATMATSGS(ph)ARK ddPTM_A549_PD325901_60min_R1 1 ATTATMATSGSARK 14 1 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 ATTATMAT(0.01)S(0.04)GS(0.95)ARK 50.088 1.1478e-05 2606800.0 1226.7 1368.9 1408.3 1449.1 1575.7 1404.3 1201.4 1065.6 1514.3 1603.8 1501.8 True False 1351.233680951189 1484.2620071549673 1503.87570679586 1538.6076158551189 1465.0282678698986 1392.8638463941809 1247.1199344313052 1044.3457720529716 1450.6592371201014 1502.5357942937787 1317.088120694575 1.025925038514968 1.126926880467369 1.141818594493724 1.1681888187129985 1.1123236515847599 1.0575327683159461 0.9468766097242061 0.7929201969434125 1.1014139557762366 1.1408012650675239 1.0 10.363136157998401 -7.380450037487764 3.7434388038370487 1.0186120995914272 1.1201918735318286 0.2635419872896634 0.09058759375208615 0.30233870475923 7.603421734373371 0.014147294650977452 0.023135372011790237 4.164376264766815e-08 7.380450037487764 0.10157977394040141 (ac)AVAVGRPS(ph)NEELR ddPTM_A549_PD325901_60min_R1 1 AVAVGRPSNEELR 13 1 D6RGI3;D6RER5;Q9NVA2 D6RGI3 SEPT11 Septin-11 1 AVAVGRPS(1)NEELR 54.7 6.998800000000001e-05 15806000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)AVNVYSTS(ph)VTSDNLSR ddPTM_A549_MK2206_60min_R1 1 AVNVYSTSVTSDNLSR 16 0 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 AVNVY(0.008)S(0.045)T(0.171)S(0.679)VT(0.079)S(0.018)DNLS(0.001)R 49.595 0.00031098 476880.0 316.74 295.44 394.15 269.82 367.99 394.69 177.14 345.78 361.96 429.19 431.0 True False 370.19796845048893 310.4766340737315 450.0463967891315 335.9259121126799 313.8591584734055 436.4558338259818 209.3240450627004 394.7953739068378 279.97663793134615 332.23568091459947 323.9708050051396 1.1426892878344885 0.9583475710683435 1.389157263050267 1.0369018038750455 0.9687884019932793 1.34720730103769 0.6461200880720706 1.2186140473385392 0.8642032973523787 1.0255111750249495 1.0 8.339719998649844 -7.746382819689111 24.99999052990909 0.9401925942673625 1.1310212871821956 0.21257916022378776 0.18068779791273454 271.05205953202994 450055.2491239512 0.02521747251828312 0.03732117255848744 1.7931523112187335e-08 7.746382819689111 0.19082869291483318 (ac)DDDIAALVVDNGSGMCK ddPTM_A549_MK2206_60min_R1 1 DDDIAALVVDNGSGMCK 17 0 P60709;A0A2R8Y793;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;C9JTX5 P60709 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed 0 62.338 1.903e-17 7770500.0 368.09 641.26 678.76 557.66 1224.9 740.15 641.25 683.88 770.88 1048.8 946.88 False True 430.2145930635232 673.8973949570844 775.0183744376278 694.2867250343088 1044.7188326152182 818.4721817281935 757.7568245255542 780.8220842946629 596.2769108424033 811.8753515767651 711.7435634414531 0.6044516805790713 0.9468261176801188 1.0889011355300855 0.9754731348426443 1.4678303904340892 1.1499537526840167 1.0646486507887978 1.0970553502713791 0.8377693055055664 1.140685203602194 1.0 9.475213730979942 -8.747943622846508 24.826505086733317 0.9233910569914632 1.0626351364344417 0.0 0.20561311061422258 402.9060930307713 741176.8572388315 0.034101747513407374 0.038559863083025996 1.7867194995619012e-09 8.747943622846508 0.13924407944297856 (ac)DDDIAALVVDNGSGMCK ddPTM_A549_PD325901_60min_R1 1 DDDIAALVVDNGSGMCK 17 0 P60709;A0A2R8Y793;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;C9JTX5 P60709 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed 0 74.392 1.8297999999999997e-30 15203000.0 1349.8 1335.6 1217.5 1165.6 1665.2 1464.6 1299.3 1201.8 1627.7 1718.4 1378.2 False True 1486.8307023297587 1448.1556992886071 1300.126871422254 1237.5964647303333 1548.2420966281368 1452.6727831865821 1348.7455725042412 1177.8291562061388 1559.2934294792237 1609.8999307360218 1208.6901371296192 1.2301173449306568 1.1981198942581492 1.075649441890688 1.0239154161291995 1.2809255648473157 1.2018570670530742 1.1158737306380473 0.9744674172681109 1.290068795615568 1.3319376747453158 1.0 10.239228723687992 -11.140454092431794 1.514519096655702 1.000085951887812 1.1682850822844735 0.0 0.13753008530830382 0.44973516314829454 1.8498449273193809 0.07519034863208354 0.016140837444790095 7.236788954980997e-12 11.140454092431794 0.16819913039666146 (ac)GDERPHYYGK ddPTM_A549_MK2206_60min_R1 1 GDERPHYYGK 10 1 K7EMR2;K7ER17;K7EPV6;Q8IWA5;Q8IWA5-2 K7EMR2 SLC44A2 Choline transporter-like protein 2 0 41.983999999999995 0.04463 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)GDKKS(ph)PTRPK ddPTM_A549_MK2206_60min_R1 1 GDKKSPTRPK 10 3 Q8IY57;Q8IY57-5;G3V1X5;A0A0B4J255;F8VRE5;G3V219;G3V212;Q8IY57-4 Q8IY57 YAF2 YY1-associated factor 2 1 GDKKS(0.982)PT(0.018)RPK 54.7 0.00021098 915750000.0 5087.7 6336.7 5324.0 4505.3 5951.5 5475.7 4754.3 4174.4 7537.2 7594.5 7896.9 True False 5946.37937767744 6659.2109637659605 6079.0232563880145 5609.098702250606 5076.04223390438 6055.134939524511 5618.094769344004 4766.133983563841 5830.0362344351415 5878.897175390676 5935.881786647532 1.001768497319728 1.1218570724817198 1.02411460923337 0.9449478449634883 0.8551454385972919 1.0200902169489345 0.9464633851000244 0.8029361356698544 0.9821685208673655 0.9903999753861272 1.0 12.535246645570336 -6.054698069666178 4.926118922161034 0.9648003311376643 1.0646904845562943 0.29643688545053637 0.0684332267606363 0.21157927876652463 10.977719242123284 0.009891929692391083 0.02804489732780008 8.816616090258695e-07 6.054698069666178 0.09989015341863006 (ac)GDKKS(ph)PTRPK ddPTM_A549_PD325901_60min_R1 2 GDKKSPTRPK 10 3 Q8IY57;Q8IY57-5;G3V1X5;A0A0B4J255;F8VRE5;G3V219;G3V212;Q8IY57-4 Q8IY57 YAF2 YY1-associated factor 2 1 GDKKS(0.88)PT(0.12)RPK;GDKKS(0.836)PT(0.164)RPK 53.251999999999995 0.00014936 285730000.0 10039.5 10346.900000000001 10226.5 11449.599999999999 11862.9 13173.4 11507.2 12970.2 11533.599999999999 12403.2 13195.1 True False 11058.702649310724 11218.86957544871 10920.531786940188 12156.815788071744 11029.690828783287 13066.12019802685 11945.112792981461 12711.499186074932 11048.882901174404 11620.059835256645 11572.186350630565 0.9556277711262521 0.9694684509498412 0.9436878612264251 1.0505202232082378 0.9531207409377989 1.1290969400363036 1.032226100673757 1.0984526865471957 0.9547792064869707 1.0041369438043548 1.0 13.498373840297894 -6.229262603694862 24.83800239043903 1.0033780825476752 0.9575820655708578 0.1616633685601493 0.05488566348032761 1134.965619624913 876104.8282463118 0.008260714217481393 0.021853140950887473 5.898443127205528e-07 6.229262603694862 -0.045796016976817455 (ac)GDMANNSVAYS(ph)GVKNSLKEANHDGDFGITLAELR ddPTM_A549_PD325901_60min_R1 1 GDMANNSVAYSGVKNSLKEANHDGDFGITLAELR 34 2 P20020-6;P20020;P20020-1;P20020-4;F8W1V5;P20020-2;P20020-5 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1 1 GDMANNS(0.108)VAY(0.001)S(0.445)GVKNS(0.445)LKEANHDGDFGITLAELR 62.802 1.7467e-09 3653600.0 947.78 958.37 968.1 1229.4 1379.5 1612.2 1289.7 1569.6 1632.9 720.74 1311.3 True False 1043.9979278812411 1039.135203299807 1033.8010876582211 1305.3372458300198 1282.6086790166437 1599.0707777232064 1338.7802392509188 1538.2930966726196 1564.2748915627112 675.232353397742 1150.0184130155785 0.9078097498836297 0.9035813614279327 0.898943074265557 1.1350576921696098 1.1152940374697018 1.3904740651326815 1.1641380903983694 1.3376247538845114 1.3602172572705764 0.5871491671399831 1.0 10.167441245095738 -6.373961108442332 2.274402687542409 1.200079550664283 0.8958354846106195 0.14976931037849894 0.21443807512362406 0.2289170478460729 2.2889149878531465 0.021651262988037618 0.0611508307843426 4.2270646640861785e-07 6.373961108442332 -0.3042440660536635 (ac)GDMANNSVAYSGVKNS(ph)LK ddPTM_A549_PD325901_60min_R1 2 GDMANNSVAYSGVKNSLK 18 1 P20020-6;P20020;P20020-1;P20020-4;F8W1V5;P20020-2;P20020-5 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1 1 GDMANNS(0.002)VAYS(0.001)GVKNS(0.997)LK;GDMANNSVAYS(0.003)GVKNS(0.997)LK 74.786 2.6802999999999995e-10 8844800.0 1723.6999999999998 1692.33 1749.67 1564.83 2455.0 1724.8899999999999 1812.82 2362.83 1687.15 1548.56 1923.7800000000002 True False 1898.6887550791264 1834.948588332651 1868.4131278204302 1661.485995113218 2282.569269290221 1710.8430677254566 1881.807857113168 2315.7015020457225 1616.2449527221665 1450.7836573210975 1687.1672558461896 1.1253707944485025 1.0875913943768085 1.10742614364178 0.9847784737144561 1.352900408291418 1.0140328777702556 1.1153653264621695 1.372538196211196 0.9579636797251305 0.8598932040045223 1.0 10.720387285684703 (ac)GDMANNSVAYSGVKNS(ph)LKEANHDGDFGITLAELR ddPTM_A549_MK2206_60min_R1 1 GDMANNSVAYSGVKNSLKEANHDGDFGITLAELR 34 2 P20020-6;P20020;P20020-1;P20020-4;F8W1V5;P20020-2;P20020-5 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1 1 GDMANNS(0.004)VAY(0.001)S(0.185)GVKNS(0.811)LKEANHDGDFGITLAELR 70.492 1.0467e-09 4313000.0 529.25 770.41 691.81 569.28 1005.0 751.2 769.03 464.66 935.26 1248.4 1156.2 True False 618.5744610798165 809.6205783128338 789.9190606690069 708.75362555595 857.1658313154502 830.6914853937969 908.7527965144436 530.5269779615691 723.4251033033231 966.3855729485447 869.0836305033466 0.7117548177976348 0.931579597056645 0.9089102969428959 0.8155183237606968 0.9862869362974953 0.9558245676686902 1.045644820151683 0.6104441038134663 0.8323998725926266 1.1119592396290374 1.0 9.763351201690261 -10.82635868512722 1.1844128639744043 0.9970090580496735 0.8699941989059734 0.22996462551737995 0.1237475826063323 0.7348397022146139 1.8955300736021843 0.07197300738658094 0.01958583774500342 1.491562015146613e-11 10.82635868512722 -0.12701485914370014 (ac)GDMANNSVAYSGVKNS(ph)LKEANHDGDFGITLAELR ddPTM_A549_PD325901_60min_R1 3 GDMANNSVAYSGVKNSLKEANHDGDFGITLAELR 34 2 P20020-6;P20020;P20020-1;P20020-4;F8W1V5;P20020-2;P20020-5 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1 1 GDMANNS(0.006)VAY(0.004)S(0.43)GVKNS(0.56)LKEANHDGDFGITLAELR;GDMANNS(0.007)VAY(0.005)S(0.16)GVKNS(0.829)LKEANHDGDFGITLAELR;GDMANNS(0.002)VAYS(0.249)GVKNS(0.747)LKEANHDGDFGIT(0.002)LAELR 54.407 9.8804e-07 37682300.0 3470.9300000000003 3367.7000000000003 3737.9 3322.35 4152.6 4068.7 3477.62 4130.5 4615.2 3591.6 4336.4 True False 3823.2962584363822 3651.507897944178 3991.576371818678 3527.5640138956924 3860.9357016922904 4035.5658561731834 3609.962732126682 4048.1139371854333 4421.239193790322 3364.8257630537073 3803.0502907044583 1.0053236129381222 0.9601524089411372 1.0495723344955552 0.9275617581281744 1.015220785044394 1.0611392297485644 0.9492282394872013 1.064438707813033 1.162550809437588 0.8847702517313868 1.0 11.89294130164011 -8.41239235678284 7.043304288372973 1.0785991601264966 0.9970664605227005 0.0 0.07778429927897297 0.2780325423861214 15.819155191445766 0.010964514314777704 0.013253309054781445 3.86907940849132e-09 8.41239235678284 -0.08153269960379605 (ac)GDS(ph)DDEYDRR ddPTM_A549_MK2206_60min_R1 2 GDSDDEYDRR 10 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 GDS(1)DDEYDRR;GDS(1)DDEYDRR 123.63 2.5137999999999997e-25 767530000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)GDS(ph)DDEYDRR ddPTM_A549_PD325901_60min_R1 4 GDSDDEYDRR 10 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 GDS(1)DDEYDRR;GDS(1)DDEYDRR;GDS(0.999)DDEY(0.001)DRR;GDS(1)DDEYDRR 132.78 2.5137999999999997e-25 2059660000.0 141.91 153.74 181.06 339.62 218.17 209.78 115.01 183.99 0.0 167.69 292.2 True False 156.31659873137957 166.69620935057688 193.34782040222848 360.59755606701736 202.8464918456405 208.0716212323373 119.38676848588685 180.32017511263726 0.0 157.10202478184556 256.26125240841304 0.6099892093021227 0.6504932282345478 0.7544949483587277 1.4071481844329696 0.7915613068274423 0.8119511602976397 0.4658791267265632 0.7036575893465716 0.0 0.6130541519849683 1.0 8.00147154439241 -7.699410840175672 5.630208991335116 0.5275998890455409 0.852231450885322 0.17919520489694918 0.2962059056562295 0.33378012512495614 20.690664313222467 0.062096830800906055 0.09201015890732374 1.9979709059367117e-08 7.699410840175672 0.32463156183978115 (ac)GDS(ph)DDEYDRRR ddPTM_A549_MK2206_60min_R1 2 GDSDDEYDRRR 11 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 GDS(1)DDEYDRRR;GDS(1)DDEYDRRR 65.563 0.0024709 82613000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)GDS(ph)DDEYDRRR ddPTM_A549_PD325901_60min_R1 2 GDSDDEYDRRR 11 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 GDS(1)DDEYDRRR;GDS(1)DDEYDRRR 70.41199999999999 0.0013104000000000002 270830000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)GDSDDEYDRR ddPTM_A549_PD325901_60min_R1 1 GDSDDEYDRR 10 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 0 42.108999999999995 0.0091991 1613400.0 0.0 0.0 0.0 0.0 119.18 0.0 0.0 0.0 0.0 0.0 92.022 False True 0.0 0.0 0.0 0.0 110.8092079486796 0.0 0.0 0.0 0.0 0.0 80.70387737552012 0.0 0.0 0.0 0.0 1.373034500350925 0.0 0.0 0.0 0.0 0.0 1.0 6.33456608358317 -10.764589116514344 0.9612516824439837 1.0115237773378896 0.15515343783168312 0.0 0.4866841593831814 0.4872006412143924 0.7823320512530674 0.2916108098097703 0.07024679784007755 1.7195344593874156e-11 10.764589116514344 -0.8563703395062064 (ac)GHQES(ph)PLAR ddPTM_A549_PD325901_60min_R1 1 GHQESPLAR 9 0 Q8TDR2 Q8TDR2 STK35 Serine/threonine-protein kinase 35 1 GHQES(1)PLAR 53.327 0.00030024 1250500.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)GS(ph)PLRFDGR ddPTM_A549_PD325901_60min_R1 2 GSPLRFDGR 9 1 E7ER27;A0A2R8YD50;P51659-3;P51659;A0A2R8YEG2;A0A2R8YDT8;A0A2R8YF45 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 1 GS(1)PLRFDGR;GS(1)PLRFDGR 48.56100000000001 0.0025305999999999996 6128800.0 0.0 172.68 271.79999999999995 363.40999999999997 264.03999999999996 88.01 162.79 353.77 403.12 259.33 144.19 True False 0.0 187.23234962051276 290.24598246617535 385.85701033600736 245.49474128854985 87.29327573962249 168.98506253210604 346.7137798228037 386.1782682875619 242.9558595424652 126.45554409571895 0.0 1.4806179591366082 2.2952412608060686 3.0513253736343713 1.9413521411344816 0.6903080158632423 1.336319919703915 2.7417839391870635 3.0538658549857574 1.9212748739475018 1.0 6.982486479160713 -8.20415660153647 24.998296843713707 2.054876400921771 1.6093977207608428 0.09660686462139556 0.8937261368460354 884.277796990799 385900.2864325137 0.17516730014019882 0.22613997588517262 6.249473034163782e-09 8.20415660153647 -0.4454786801609283 (ac)GS(ph)QGSPVKSYDYLLK ddPTM_A549_MK2206_60min_R1 1 GSQGSPVKSYDYLLK 15 1 H3BUX0;H3BME4;H3BTC6;H3BNV8;Q96S21-2;Q96S21 H3BUX0 RAB40C Ras-related protein Rab-40C 1 GS(0.499)QGS(0.499)PVKS(0.001)YDYLLK 69.01 0.00017513 1558300.0 929.24 1266.9 1002.7 917.74 2062.1 1456.1 1372.5 1013.8 2398.7 2376.5 1722.2 True False 1086.0729942632197 1331.3797986325844 1144.8979374869014 1142.5863411989137 1758.7678216473516 1610.1835355190465 1621.8654840722377 1157.5092546322883 1855.3982799367902 1839.6469994490687 1294.5302096980308 0.838970760301193 1.0284656075682848 0.884411911680274 0.8826262474519151 1.358614737973254 1.2438361989981266 1.2528602823804034 0.894153914648539 1.4332599317010846 1.4210923666881399 1.0 10.338212917627413 -6.744991872722561 24.832500979206518 1.200729320639637 0.9154499851527828 0.47103623766337466 0.16154853015226028 194.75961829681103 294046.9067480403 0.025854470501191332 0.05369689574271418 1.7989045790605478e-07 6.744991872722561 -0.28527933548685425 (ac)GSQGS(ph)PVKSYDYLLK ddPTM_A549_MK2206_60min_R1 1 GSQGSPVKSYDYLLK 15 1 H3BUX0;H3BME4;H3BTC6;H3BNV8;Q96S21-2;Q96S21 H3BUX0 RAB40C Ras-related protein Rab-40C 1 GS(0.399)QGS(0.601)PVKSYDYLLK 70.332 1.3295e-05 1278000.0 1011.6 975.05 926.62 672.58 1175.7 1027.8 938.99 1204.3 1332.5 1397.9 1755.4 True False 1182.3333487545453 1024.675880224722 1058.028649480516 837.3621301932639 1002.7560874403723 1136.561113801576 1109.5923285165684 1375.0132130140696 1030.6908775652528 1082.1134191162853 1319.4857334246444 0.8960561821959768 0.7765721555512681 0.8018492528407013 0.6346124925655253 0.7599597798134431 0.8613667317582141 0.8409278709188386 1.0420826676506059 0.7811307477271147 0.8201024017953769 1.0 10.365760036668606 -7.53119504543942 2.2909675358942114 0.9040316160940167 0.7689390115405385 0.29746965201294884 0.09038309387683344 0.31746706436881794 3.3442646451675255 0.016217264895714983 0.026366372729602586 2.9430995652624197e-08 7.53119504543942 -0.13509260455347827 (ac)GSQPPLGS(ph)PLSR ddPTM_A549_MK2206_60min_R1 1 GSQPPLGSPLSR 12 0 Q9NS56 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 GS(0.049)QPPLGS(0.906)PLS(0.045)R 40.725 0.032783 487150.0 178.85 114.22 0.0 0.0 121.71 133.6 0.0 97.695 197.65 90.26299999999999 0.0 True False 209.03550753731744 120.03331012693482 0.0 0.0 103.80662022826208 147.73746332349742 0.0 111.5435654283896 152.882590582193 69.8725256096239 0.0 0.0 (ac)GSQPPLGS(ph)PLSR ddPTM_A549_PD325901_60min_R1 1 GSQPPLGSPLSR 12 0 Q9NS56 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 GSQPPLGS(0.885)PLS(0.114)R 62.14 0.0026116 901320.0 162.22 124.4 0.0 0.0 104.63 212.45 93.053 0.0 124.81 119.11 103.6 True False 178.68845497994772 134.883624581838 0.0 0.0 97.28114975390459 210.71987763757295 96.59418283555539 0.0 119.56466973846648 111.58937427256022 90.85785677450919 1.9666813781819255 1.484556530059826 0.0 0.0 1.070696065342337 2.319225712758524 1.0631351681042025 0.0 1.3159530059706537 1.2281752864752518 1.0 6.505539369275466 -6.978137257890363 24.9738644690232 1.14574602495643 0.8068105566876035 0.03173578158838586 0.7298908052962257 701.4840447233447 801302.9254169478 0.10815745650030845 0.2043879232248088 1.0516294559388883e-07 6.978137257890363 -0.3389354682688265 (ac)GT(ph)PQKDVIIK ddPTM_A549_MK2206_60min_R1 2 GTPQKDVIIK 10 1 Q5T4U8;P53611 Q5T4U8 RABGGTB Geranylgeranyl transferase type-2 subunit beta 1 GT(1)PQKDVIIK;GT(1)PQKDVIIK 77.789 1.2567e-05 215260000.0 18201.1 17249.3 16424.8 15655.8 21976.2 17455.5 17534.8 16358.3 24354.3 24707.9 26454.1 True False 21273.000705828723 18127.21569228276 18754.083617866625 19491.47170281558 18743.53009169611 19302.62942397687 20720.646185872396 18677.139120192696 18838.089935825472 19126.368229618205 19884.8168739825 1.0698112454665114 0.9116108942396445 0.9431358476529226 0.9802188185257276 0.9426051147707745 0.9707220109848046 1.0420335433404722 0.939266337656348 0.9473604939492011 0.9618579014747348 1.0 14.279379655486196 -7.523476352982434 24.99999410695612 0.9771393535549389 0.964521919313842 0.0029987776803568345 0.04508381630373226 95.67016145657001 4002191.073338893 0.00675074522576634 0.010075773997156508 2.9958747111785664e-08 7.523476352982434 -0.012617434241096848 (ac)GT(ph)PQKDVIIK ddPTM_A549_PD325901_60min_R1 2 GTPQKDVIIK 10 1 Q5T4U8;P53611 Q5T4U8 RABGGTB Geranylgeranyl transferase type-2 subunit beta 1 GT(1)PQKDVIIK;GT(1)PQKDVIIK 83.005 1.1605999999999999e-05 412820000.0 17462.9 15908.699999999999 15850.3 15334.4 18769.0 15845.0 16741.9 16413.5 17428.199999999997 16695.4 18076.0 True False 19235.72075249247 17249.381980587506 16925.99667359684 16281.57106105081 17450.73018953488 15715.963573393012 17379.02216601921 16086.119866358344 16695.75336219807 15641.249594745213 15852.766593204911 1.213398345291832 1.0880991579085784 1.0676998600895289 1.027049188248927 1.100800297975428 0.9913704009323812 1.0962769220022774 1.014720034624963 1.0531760033201079 0.9866574078905342 1.0 13.952447018147279 -2.0000000009383023 0.6863584744132466 1.0304567015295183 21.41879958877218 0.6762631130275341 0.036064292017 98.80599897961415 0.5133013115595467 0.005364002602697565 3089.2355975107357 0.009999999978394791 2.0000000009383023 20.38834288724266 (ac)GT(ph)PQKDVIIKSDAPDTLLLEK ddPTM_A549_PD325901_60min_R1 1 GTPQKDVIIKSDAPDTLLLEK 21 2 Q5T4U8;P53611 Q5T4U8 RABGGTB Geranylgeranyl transferase type-2 subunit beta 1 GT(0.998)PQKDVIIKS(0.002)DAPDTLLLEK 72.443 6.7628e-07 3622600.0 1797.6 1497.8 2217.2 2562.3 1960.1 4419.7 2890.6 3203.8 3422.8 2328.4 2267.1 True False 1980.091028676822 1624.024862529558 2367.6725251067096 2720.567451594484 1822.4293379779065 4383.707428546863 3000.603364797014 3139.8976956675224 3278.9516191076273 2181.384426632771 1988.2610723309817 0.9958908597226713 0.8168066483470385 1.1908257713515038 1.3683150012110665 0.9165945877727925 2.2047946768919675 1.5091596403279124 1.5792180108351637 1.6491554679303135 1.0971317886716843 1.0 10.957291489765465 -6.065423184922629 1.483041030031051 1.3945241011970981 0.8866581366155083 0.247309231664268 0.3393449335617692 0.579373715320364 2.2793050845494736 0.05498263467607281 0.27434958585709956 8.601551918811121e-07 6.065423184922629 -0.5078659645815898 (ac)GTRDDEY(ph)DYLFK ddPTM_A549_PD325901_60min_R1 1 GTRDDEYDYLFK 12 1 H3BSC1;P62491;H3BMH2;P62491-2;Q15907-2;Q15907;B4DQU5 H3BSC1 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B 1 GT(0.074)RDDEY(0.92)DY(0.006)LFK 48.64 3.9565e-05 2453800.0 1940.4 2263.1 2309.8 1971.6 2179.2 2053.4 2100.9 2791.6 2269.8 2395.1 2670.1 True False 2137.3879795530192 2453.819379350141 2466.556917955748 2093.38125417152 2026.1405098318726 2036.677791202599 2180.8508991565914 2735.919348032166 2174.4081994421217 2243.8729772496777 2341.6946271584648 0.912752651333807 1.0478818847219777 1.0533213380383408 0.893959968090177 0.8652454023394579 0.869745255244494 0.9313131071248818 1.1683501837949188 0.9285618091376256 0.9582261287299065 1.0 11.193337235561483 -6.989230129479966 0.0032305461860979014 1.9211848989351588 2.5961521749515744e-05 0.00830494378024893 0.08832702113149837 164220.71060491021 152.99485539836166 44943.61133575963 46040.99350785833 1.0251085847417259e-07 6.989230129479966 -1.9211589374134093 (ac)GTRDDEYDYLFK ddPTM_A549_PD325901_60min_R1 1 GTRDDEYDYLFK 12 1 H3BSC1;P62491;H3BMH2;P62491-2;Q15907-2;Q15907;B4DQU5 H3BSC1 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B 0 43.77 0.00022674 3389800.0 2795.6 3261.6 2596.4 2623.9 3252.8 2931.1 2696.7 3181.0 3204.7 2863.5 3148.9 False True 3079.4072539880544 3536.4664785861955 2772.6073174215526 2785.972343690734 3024.334549550806 2907.2300934031086 2799.3243941908627 3117.552459553776 3070.017603644446 2682.6981213120325 2761.605262521737 1.1150787173602497 1.28058362524878 1.00398393465175 1.0088235206891032 1.0951364377069444 1.0527319500935464 1.0136584080936617 1.128891410319449 1.1116786476721459 0.9714270745784822 1.0 11.431291403497408 -14.999981189677378 0.012433199590653244 3.202005913662715e-06 1.9653712964202867 0.21961684458142783 0.07457479353760332 8668.896829302674 8.389698879781234 795.2121773795053 551.8843257007701 1.0000433133064584e-15 14.999981189677378 1.965368094414373 (ac)KNIS(ph)RY(ph)LTDIK ddPTM_A549_PD325901_60min_R1 1 KNISRYLTDIK 11 2 F5GWF7;E9PHB0;F5H286;F5H1R2;Q8IY45-2 F5GWF7 AMN1 2 KNIS(0.995)RY(0.994)LT(0.01)DIK 50.123000000000005 0.0052271 26667000.0 10186.0 9466.1 7827.0 8440.8 10985.0 10153.0 9532.0 9708.0 9854.2 10427.0 11140.0 True False 11220.075221463127 10263.841468280845 8358.187287574516 8962.169045552328 10213.451496192703 10070.317334216426 9894.745476110538 9514.366324221328 9440.062242903588 9768.637440517043 9769.850622278302 1.148438768948817 1.0505627839258966 0.8555081966673315 0.9173291785153594 1.0454050825406536 1.0307544837229106 1.0127837014772199 0.9738497232010498 0.9662442761793417 0.9998758239190993 1.0 13.254120788703668 -9.43903912722081 0.0030508225094117844 2.8943282171021815e-08 1.9777020593323515 0.013923054211622654 0.07166804199322334 90434.40830304683 134.97895119714727 44000.68414298789 43496.154549450024 3.638822511318523e-10 9.43903912722081 1.9777020303890693 (ac)KNIS(ph)RYLTDIK ddPTM_A549_PD325901_60min_R1 1 KNISRYLTDIK 11 2 F5GWF7;E9PHB0;F5H286;F5H1R2;Q8IY45-2 F5GWF7 AMN1 1 KNIS(0.54)RY(0.457)LT(0.004)DIK 49.368 0.049953 8254300.0 3913.0 3745.9 4050.8 5089.4 5475.8 5085.4 4557.3 4701.1 5176.3 4538.9 5325.2 True False 4310.24487940165 4061.5801392371914 4325.711647439234 5403.760679133972 5091.198698484474 5043.986188458995 4730.73054535025 4607.332872558394 4958.758112068138 4252.313079386482 4670.2341592240955 0.9229183660713377 0.8696737681161527 0.9262301417789939 1.157064184557235 1.0901377800145073 1.0800285417159883 1.0129536087621367 0.9865314490620419 1.0617793333283265 0.9105138916831 1.0 12.189279171188526 -6.026751907376546 21.96294723178106 1.040433144290478 0.8967099741737438 0.4770031701875068 0.06156224556646189 76.18298305163147 62545.92081975996 0.0071393037039314275 0.01898766249196906 9.402602849783357e-07 6.026751907376546 -0.1437231701167342 (ac)MAGS(ph)RLPR ddPTM_A549_MK2206_60min_R1 2 MAGSRLPR 8 1 Q9BU23-3;Q9BU23 Q9BU23-3 LMF2 Lipase maturation factor 2 1 MAGS(1)RLPR;MAGS(1)RLPR 50.966 0.0050244 30452000.0 139.6 101.87 365.85 0.0 156.93 0.0 0.0 0.0 270.97 311.01 120.23 True False 163.16106710768523 107.05474787804984 417.7330312452208 0.0 133.84580488391396 0.0 0.0 0.0 209.59572765017367 240.75262499417414 90.37357282080724 1.8054068464372994 1.1845802322136587 4.622291873681945 0.0 1.4810281446911862 0.0 0.0 0.0 2.319214800390377 2.6639715292825543 1.0 6.497829054095223 -11.493853835928258 2.5172050824568193 0.9915460766091335 1.4590920185959335 0.0 1.4198595175547661 1.579426150527883 18.15099659844079 1.1513020383632013 0.19536235440447874 3.20734859276652e-12 11.493853835928258 0.4675459419868 (ac)MAGS(ph)RLPR ddPTM_A549_PD325901_60min_R1 2 MAGSRLPR 8 1 Q9BU23-3;Q9BU23 Q9BU23-3 LMF2 Lipase maturation factor 2 1 MAGS(1)RLPR;MAGS(1)RLPR 44.721000000000004 0.009433 61678000.0 400.44 531.15 747.46 679.6800000000001 471.79 316.02 299.42 593.61 501.16999999999996 542.61 553.65 True False 441.0923740116528 575.9118745710874 798.1871304421167 721.6622899347228 438.65309798714185 313.4464378960971 310.8145919489108 581.7699828719639 480.1075677656214 508.34951199759826 485.55455987651544 0.9084300930544857 1.1860909610601769 1.6438670262825024 1.4862640567483363 0.9034064021532381 0.6455431866931941 0.6401228978839291 1.1981557397379146 0.9887819154406061 1.0469462219176358 1.0 8.923489604555677 -6.772803276109959 24.99278207689747 0.9508380737528993 1.3217081763898058 0.3905148229190203 0.23087068297343594 181.87022216221698 399990.1298597377 0.0345742842835036 0.06574845171556928 1.6873171622637393e-07 6.772803276109959 0.37087010263690645 (ac)MAPS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 MAPSPTK 7 0 Q15287-2;Q15287-3;H3BMS0 Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 MAPS(0.978)PT(0.022)K 53.493 0.0049753 6795000.0 982.02 1004.4 1028.1 922.37 949.58 950.16 617.18 787.07 762.84 987.69 1105.6 True False 1081.713947475085 1089.0443129421064 1097.8730484675311 979.3427000457423 882.8847766731595 942.4222119845441 640.6671226338549 771.3712714055297 730.7804876475581 925.3270848397706 969.6182089758439 1.1156081202493524 1.12316817367983 1.1322735467469778 1.0100291960071273 0.9105488825397614 0.9719518499760587 0.6607416369692123 0.7955412390824302 0.7536785931644606 0.9543210681007572 1.0 9.921272981977172 -6.650716607807098 1.5122344481238505 0.86078320376238 1.1297361608221195 0.6078906144584861 0.09341857077496266 0.25790846258256117 1.1740595589967304 0.017515552344853243 0.048732670972432404 2.2350301817068958e-07 6.650716607807098 0.26895295705973943 (ac)MAS(ph)GVAVSDGVIK ddPTM_A549_MK2206_60min_R1 1 MASGVAVSDGVIK 13 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 MAS(0.998)GVAVS(0.002)DGVIK 51.927 0.0010292 716240.0 363.49 540.96 485.59 279.24 536.61 326.03 385.98 423.14 587.71 690.03 661.48 True False 424.8382255227261 568.4925533730226 554.453963762107 347.6538125355599 457.67537984296877 360.53027819880134 456.1075697939543 483.12139081190173 454.59462338001845 534.1517437533519 497.2162600807415 0.8544334922871143 1.1433506886534779 1.115116315126281 0.6992004092527171 0.9204754884095065 0.7250975222335968 0.9173223130713551 0.9716524369767172 0.9142794793279652 1.0742845450521117 1.0 8.957729666282331 (ac)MAS(ph)GVAVSDGVIK ddPTM_A549_PD325901_60min_R1 1 MASGVAVSDGVIK 13 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 MAS(0.993)GVAVS(0.007)DGVIK 40.715 0.0024558 3426600.0 244.71 338.65 429.57 312.31 469.47 414.64 365.07 437.16 378.75 375.49 503.8 True False 269.5527790540192 367.18922399227847 458.7232034142567 331.60067939252764 436.4960467835762 411.2633093134536 378.96293862396914 428.44050085461424 362.83245463860413 351.78149731847583 441.83579385132936 0.6100745634581144 0.8310535929912273 1.038221008342773 0.7505065999793261 0.9879146344817191 0.9308057767991452 0.8577008560593986 0.9696826441335751 0.8211929854662057 0.7961815276488093 1.0 8.787366488323153 -2.0001028100899454 0.02391138874064693 1.5151302507468714 7.961621229732888e-07 0.05763806963475293 0.11854105250476862 2414.5565140060444 4.320532040562914 94.88687549890642 196.0913458967659 0.009997632990375765 2.0001028100899454 -1.5151294545847485 (ac)MASEELQK ddPTM_A549_MK2206_60min_R1 1 MASEELQK 8 0 Q9HB71;B2ZWH1;Q9HB71-2 Q9HB71 CACYBP Calcyclin-binding protein 0 45.312 0.030083999999999996 6214900.0 1233.3 1674.2 1091.9 1342.9 1784.8 1256.7 1294.9 1128.2 1662.0 1748.0 2055.0 False True 1441.450888709944 1759.409628913625 1246.7478387772503 1671.9105602850714 1522.2582843102625 1389.683159870053 1530.166568542908 1288.125804967595 1285.5596536686307 1353.1255859612763 1544.6867848852933 0.9331671008093622 1.1390073677909252 0.8071201559931986 1.0823621828351602 0.985480227581091 0.8996536860857843 0.990599896053708 0.8339074416715813 0.8322461655319301 0.8759870280509702 1.0 10.59309861812979 -7.219215847213109 7.260537501648333 0.916202447773746 0.993027283876017 0.1619272552470784 0.09329945198597729 0.43319389534977454 63.70045203670473 0.014280986020792545 0.024692845714600807 6.036485375164464e-08 7.219215847213109 0.07682483610227098 (ac)MASEELQK ddPTM_A549_PD325901_60min_R1 2 MASEELQK 8 0 Q9HB71;B2ZWH1;Q9HB71-2 Q9HB71 CACYBP Calcyclin-binding protein 0 ; 52.683 0.0011715 7015900.0 2034.2199999999998 1696.87 1783.3400000000001 1904.98 2140.63 1751.03 1773.84 1951.0099999999998 2457.28 1926.3999999999999 2218.25 False True 2240.732516886385 1839.8711900657831 1904.3681764945895 2022.646288076519 1990.279533572596 1736.770192232145 1841.3444518824926 1912.0955750122646 2354.0090670213826 1804.7667752385196 1945.4193126453201 1.1517992559863648 0.9457453095620728 0.9788985665538035 1.0396968277888576 1.023059409678768 0.8927485097649922 0.9465026073883733 0.9828706657652416 1.2100265745899659 0.9277006573891026 1.0 10.925865429629523 -8.697948623602501 24.999886801098242 1.0991798868846525 0.9903535608764127 0.0 0.09279730365343533 70.72576119194112 27848.24810132007 0.015920400596486403 0.0180520343853447 2.004709167479822e-09 8.697948623602501 -0.10882632600823983 (ac)MDDDS(ph)LDELVAR ddPTM_A549_MK2206_60min_R1 3 MDDDSLDELVAR 12 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 MDDDS(1)LDELVAR;MDDDS(1)LDELVAR;MDDDS(1)LDELVAR 63.537 0.0012749 1404340.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MDDDS(ph)LDELVAR ddPTM_A549_PD325901_60min_R1 4 MDDDSLDELVAR 12 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 MDDDS(1)LDELVAR;MDDDS(1)LDELVAR;MDDDS(1)LDELVAR;MDDDS(1)LDELVAR 83.314 0.0001054 7079820.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MDDDS(ph)Y(ph)SHHSGLEYADPEK ddPTM_A549_MK2206_60min_R1 1 MDDDSYSHHSGLEYADPEK 19 0 P51636-2 P51636-2 CAV2 Caveolin-2 2 MDDDS(0.542)Y(0.549)S(0.542)HHS(0.311)GLEY(0.056)ADPEK 42.903999999999996 0.011103 5070600.0 779.49 630.42 540.68 334.05 954.64 725.18 609.18 557.96 792.09 786.2 727.81 True False 911.0488552992089 662.5056852584681 617.3565541442284 415.89226499607435 814.2137206039613 801.918066264475 719.8601206463577 637.0525386808357 612.682879707813 608.5968739603861 547.0746904658712 1.6653098218149867 1.2109967739401353 1.1284684978179258 0.760211123351208 1.4883044944203196 1.4658292190077142 1.315835174230685 1.164470866196245 1.119925469749061 1.1124566436113588 1.0 9.095594003064233 -8.896269488237506 1.3241189148235935 1.0401995842577372 1.2721166771387482 0.14680878687656895 0.22154766860900643 0.5312851192989444 1.8632116510659238 0.047378355278285184 0.04784700855255344 1.2697859336382605e-09 8.896269488237506 0.23191709288101103 (ac)MDDDS(ph)Y(ph)SHHSGLEYADPEK ddPTM_A549_PD325901_60min_R1 2 MDDDSYSHHSGLEYADPEK 19 0 P51636-2 P51636-2 CAV2 Caveolin-2 2 MDDDS(0.542)Y(0.549)S(0.542)HHS(0.311)GLEY(0.056)ADPEK;MDDDS(0.557)Y(0.564)S(0.557)HHS(0.314)GLEY(0.008)ADPEK 42.903999999999996 0.0024973 7345000.0 1549.51 1252.17 1936.9 1521.37 1518.1399999999999 1195.4 1067.23 1565.1 1157.8200000000002 1387.44 1507.79 True False 1706.815114511028 1357.6947603909966 2068.349681525884 1615.3415696180389 1411.511083698678 1185.6650587336067 1107.844021660664 1533.8828527028022 1109.1608518275086 1299.836801618008 1322.3413886683136 1.2907522438134567 1.0267354346053452 1.564157107423561 1.2215768057027967 1.0674331876733922 0.8966406624598288 0.8377897199272702 1.1599749246656532 0.8387855521519355 0.9829812579087694 1.0 10.36887896994676 -6.881696536290599 2.800155872339249 0.9337280587745006 1.2825437934584922 0.5260124121930836 0.1429957253540109 0.14961537530217686 2.3721346065426183 0.02058268152462408 0.04203578651052982 1.313117120445979e-07 6.881696536290599 0.34881573468399163 (ac)MDDREDLVYQAK ddPTM_A549_MK2206_60min_R1 2 MDDREDLVYQAK 12 1 P62258;B4DJF2;I3L3T1;I3L0W5 P62258 YWHAE 14-3-3 protein epsilon 0 ; 73.067 0.0015027 7103600.0 6747.5 7137.7 6561.6 6019.9 8001.200000000001 6458.4 5600.2 6515.200000000001 7780.8 9877.4 9532.2 False True 7886.313039463518 7500.978442418341 7492.133546039746 7494.775770243579 6824.234079125552 7141.823601261045 6617.683849837046 7438.749551963193 6018.461223384403 7646.08847984777 7165.09166466355 1.1006576619747732 1.0468782247980581 1.0456437819196487 1.046012545409007 0.9524280216512759 0.9967525798005827 0.9236007241154802 1.0381932151195297 0.8399698852515672 1.0671305878131856 1.0 12.806769445996627 -6.713281643194515 0.7348185489678953 0.931236782142097 1.0857279148168737 0.16197628454389057 0.06526867188747566 0.6090682224854812 0.5639981416253157 0.011621320365645414 0.05205609760522287 1.9351665870369674e-07 6.713281643194515 0.15449113267477665 (ac)MDEPS(ph)PLAQPLELNQHSR ddPTM_A549_MK2206_60min_R1 4 MDEPSPLAQPLELNQHSR 18 0 A0A087X2F8;A0A087X126;A0A0C4DGT1;Q13085 A0A087X2F8 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 MDEPS(1)PLAQPLELNQHSR;MDEPS(1)PLAQPLELNQHSR;MDEPS(1)PLAQPLELNQHSR;MDEPS(1)PLAQPLELNQHSR 90.412 2.2851e-09 36879600.0 3154.0499999999997 2768.98 2593.55 2206.98 4623.58 3704.7 3217.47 3954.67 5325.38 3855.76 3783.91 True False 3686.376530881051 2909.909254730169 2961.354388919073 2747.6901990750953 3943.45750681939 4096.728895019167 3802.042651393736 4515.256583168938 4119.1899328843865 2984.741138058379 2844.2607163967436 1.2960754651040371 1.023081055106858 1.0411684033911874 0.966047234430749 1.386461333901614 1.440349287040435 1.3367419623227648 1.5874974319826411 1.4482462557450742 1.0493908384881128 1.0 11.473837998920802 -6.7621821379330616 24.999884323196827 1.282426371405893 1.0745261392801138 0.27450760252403095 0.18039328571370358 28.5598594822726 961322.9917920977 0.03207206043026487 0.06325709491933766 1.7290910469412572e-07 6.7621821379330616 -0.20790023212577924 (ac)MDEPS(ph)PLAQPLELNQHSR ddPTM_A549_PD325901_60min_R1 2 MDEPSPLAQPLELNQHSR 18 0 A0A087X2F8;A0A087X126;A0A0C4DGT1;Q13085 A0A087X2F8 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 MDEPS(1)PLAQPLELNQHSR;MDEPS(1)PLAQPLELNQHSR 94.68799999999999 6.5249e-11 34774000.0 3497.87 3309.54 3045.88 2904.13 4453.56 3471.15 2317.3 4366.33 3101.48 3435.13 3625.4399999999996 True False 3852.971187404204 3588.446550631638 3252.5917331643623 3083.51151434223 4140.757309547922 3442.882105256113 2405.4861195752146 4279.240122830381 2971.1355812872284 3218.2353055570466 3179.53386355769 1.2118037903496275 1.1286077471168687 1.0229775409672552 0.9697998658495125 1.302315838496743 1.0828260534403473 0.7565530743816747 1.345870277362667 0.934456341333859 1.0121720490047093 1.0 11.634599558968327 -7.5393920377212025 24.972715543240984 0.9850594293527541 1.1206521173400927 0.10763025981530439 0.15361964877562023 331.64904350158037 501544.5383707681 0.022243274670416913 0.032996950940558455 2.8880716424272114e-08 7.5393920377212025 0.1355926879873386 (ac)MDETS(ph)PLVSPER ddPTM_A549_MK2206_60min_R1 1 MDETSPLVSPER 12 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 MDET(0.117)S(0.881)PLVS(0.003)PER 54.7 0.0012552 1059200.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 98.01799999999999 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 75.8170795025823 0.0 0.0 0.0 (ac)MDETSPLVS(ph)PER ddPTM_A549_MK2206_60min_R1 1 MDETSPLVSPER 12 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 MDET(0.002)S(0.009)PLVS(0.989)PER 47.915 0.0065845 343980.0 141.52 0.0 94.162 0.0 0.0 108.4 0.0 0.0 103.46 0.0 0.0 True False 165.40511616819217 0.0 107.51558750338255 0.0 0.0 119.87081604990357 0.0 0.0 80.02647519167057 0.0 0.0 0.0 (ac)MDETSPLVS(ph)PER ddPTM_A549_PD325901_60min_R1 2 MDETSPLVSPER 12 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 MDETS(0.001)PLVS(0.998)PER;MDETS(0.001)PLVS(0.999)PER 69.602 0.00016495 1306900.0 0.0 0.0 0.0 0.0 0.0 109.26 0.0 96.271 0.0 107.27 0.0 True False 0.0 0.0 0.0 0.0 0.0 108.37022278503758 0.0 94.35079938186152 0.0 100.49695389318724 0.0 0.0 (ac)MDGDEKELES(ph)SEEGGSAEER ddPTM_A549_MK2206_60min_R1 1 MDGDEKELESSEEGGSAEER 20 1 J3KRR1 J3KRR1 C17orf75 1 MDGDEKELES(0.902)S(0.097)EEGGS(0.002)AEER 51.606 0.0020975 1700700.0 219.73 0.0 0.0 0.0 249.62 0.0 0.0 0.0 0.0 223.21 232.03 True False 256.8150521172759 0.0 0.0 0.0 212.9012286696145 0.0 0.0 0.0 0.0 172.78670597392244 174.41054729777835 1.4724743204824933 0.0 0.0 0.0 1.220690101419838 0.0 0.0 0.0 0.0 0.9906895463088969 1.0 7.446343478020804 -10.889155295513493 1.1595948452821723 0.9967894799852436 0.2532466542407687 0.21072019541945175 0.5114311122719942 0.5725648264162452 1.3766770717154555 0.3365629178226994 0.08219125087436091 1.2907576405015087e-11 10.889155295513493 -0.7435428257444749 (ac)MDGDEKELES(ph)SEEGGSAEER ddPTM_A549_PD325901_60min_R1 1 MDGDEKELESSEEGGSAEER 20 1 J3KRR1 J3KRR1 C17orf75 1 MDGDEKELES(0.912)S(0.087)EEGGS(0.001)AEER 70.09100000000001 0.00015597 2743900.0 213.65 669.59 180.75 168.55 307.9 368.26 0.0 191.23 627.31 422.4 355.52 True False 235.3395907191829 726.0186992263096 193.0167819380471 178.96095069517645 286.2741661973358 365.2610126562138 0.0 187.41576763296712 600.9463422292879 395.72959191276493 311.79329382696426 0.7547936257082847 2.3285257046908385 0.619053667155412 0.5739730591976565 0.918153699470551 1.171484505561311 0.0 0.6010897968093475 1.9273870032714517 1.269204950034566 1.0 8.284446088090641 -8.747791658935789 24.952802247769068 1.4379327942204239 0.8837471131743956 0.14082285650289317 0.5779853871760885 336.86479834670405 615906.1857023556 0.10664204971071757 0.12060223847046718 1.7873447996810191e-09 8.747791658935789 -0.5541856810460283 (ac)MDGFAGS(ph)LDDSISAASTSDVQDR ddPTM_A549_PD325901_60min_R1 2 MDGFAGSLDDSISAASTSDVQDR 23 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 MDGFAGS(0.468)LDDS(0.468)IS(0.064)AASTSDVQDR;MDGFAGS(0.344)LDDS(0.344)IS(0.221)AAS(0.031)T(0.031)S(0.031)DVQDR 71.692 7.6941e-11 7603250.0 1164.8700000000001 818.72 897.24 1101.81 1409.01 1419.25 1224.29 1158.57 1021.77 1145.53 1722.52 True False 1283.12674486803 887.7164076980902 958.1321019424257 1169.8663013079345 1310.0459984206157 1407.6920985508375 1270.881025907194 1135.461412469418 978.8285602008888 1073.201040302627 1510.6609599539347 0.8493810185623365 0.5876344403082738 0.634246947092379 0.7744069200964906 0.8672005388029379 0.9318385368175285 0.8412748191665372 0.751632194495873 0.6479472139339172 0.7104182002130727 1.0 10.560964195146772 -10.97012494492616 1.226571995168764 1.0005499084598364 0.7546036441383869 0.0 0.13212162503674166 0.3950482063093984 1.053143335136345 0.08158430422784395 0.01867714917393196 1.0712110774120738e-11 10.97012494492616 -0.2459462643214495 (ac)MDGFAGSLDDS(ph)ISAASTSDVQDR ddPTM_A549_PD325901_60min_R1 1 MDGFAGSLDDSISAASTSDVQDR 23 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 MDGFAGS(0.066)LDDS(0.811)IS(0.122)AAS(0.001)TSDVQDR 82.586 3.3439999999999996e-11 801550.0 306.33 237.25 188.43 200.38 178.55 266.69 245.59 0.0 203.46 297.59 293.34 True False 337.42839609177304 257.24389012894756 201.21799292163882 212.75701750400145 166.0092639640607 264.51816506078785 254.93606184200468 0.0 194.909283751209 278.8001166129727 257.2610396354685 1.3116187222515288 0.99993333811235 0.7821549396160373 0.827008309557763 0.6452950054127553 1.0282091895282803 0.9909625732805938 0.0 0.7576323411714027 1.0837245974284504 1.0 8.007089177430844 -5.366270329072149 2.3246723055175553 0.8157303649644698 1.3743143947448029 0.2270879456669399 0.2832537600453524 0.5480601411580184 4.080013389492826 0.03883961321410669 0.5604278976575929 4.302587101392667e-06 5.366270329072149 0.5585840297803331 (ac)MDGFAGSLDDSISAAS(ph)TSDVQDR ddPTM_A549_MK2206_60min_R1 1 MDGFAGSLDDSISAASTSDVQDR 23 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 MDGFAGSLDDSISAAS(0.857)T(0.131)S(0.012)DVQDR 169.39 1.7544999999999997e-88 3419000.0 503.15 599.04 511.43 670.78 954.48 654.78 475.95 459.83 679.09 835.24 743.44 True False 588.0694191635515 629.528577293285 583.9584643152747 835.1211301124584 814.0772563920107 724.0683849922126 562.4239542034111 525.0123106703142 525.2771992838932 646.5587039006268 558.8233300998163 1.0523351254116597 1.1265252243152402 1.0449786772699141 1.4944278184722355 1.4567703468045996 1.295701782641896 1.0064432243781798 0.9394960489150249 0.9399700602873342 1.1570001985871623 1.0 9.126248442298598 -7.817117961259898 5.812855218030923 0.9691779781880037 1.2515176137233637 0.37728783641862873 0.14762691041774925 0.13542698264437686 9.53759788539282 0.02294909647604244 0.03208313219706255 1.5236388531440415e-08 7.817117961259898 0.28233963553536 (ac)MDGFAGSLDDSISAAS(ph)TSDVQDR ddPTM_A549_PD325901_60min_R1 5 MDGFAGSLDDSISAASTSDVQDR 23 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 MDGFAGSLDDSIS(0.003)AAS(0.457)T(0.457)S(0.082)DVQDR;MDGFAGSLDDS(0.001)IS(0.144)AAS(0.729)T(0.109)S(0.017)DVQDR;MDGFAGSLDDSIS(0.002)AAS(0.83)T(0.142)S(0.026)DVQDR;MDGFAGSLDDSIS(0.003)AAS(0.852)T(0.126)S(0.019)DVQDR;MDGFAGSLDDSIS(0.004)AAS(0.836)T(0.136)S(0.023)DVQDR 106.73 2.7364999999999994e-34 12996200.0 1664.6799999999998 1597.3899999999999 1415.25 1298.85 1832.62 1516.49 2002.08 1736.4699999999998 1508.0800000000002 1755.8000000000002 1683.59 True False 1833.6770881273542 1732.0076613406916 1511.2973755896057 1379.0770145976267 1703.9030933957818 1504.140208230657 2078.2702499802135 1701.8347436156384 1444.700642089468 1644.9384883532969 1476.519103156332 1.2418918822028995 1.173034373641496 1.0235542312720023 0.9340055348079108 1.1540000327482216 1.0187069066802317 1.4075471462153977 1.15259920442455 0.9784503559765355 1.114065158274578 1.0 10.527984306796412 -8.763124702571469 24.991163232625926 0.9898237709658958 1.1342288786057382 0.10515347744313974 0.12427274414112825 48.54374352470545 719838.9083408362 0.02071329683354529 0.0226193377726215 1.7253424090021472e-09 8.763124702571469 0.14440510763984238 (ac)MDLAAAAEPGAGS(ph)QHLEVR ddPTM_A549_MK2206_60min_R1 4 MDLAAAAEPGAGSQHLEVR 19 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR 94.882 4.7345e-18 8462100.0 671.22 444.33000000000004 862.54 570.95 995.23 465.74 596.63 776.28 1036.26 942.26 1175.8600000000001 True False 784.5055262465654 466.9444991131236 984.8611419167772 710.8327756309191 848.8329853732091 515.0242976668088 705.0299480961892 886.3200672577951 801.5487645671809 729.4028115720091 883.8615099149491 0.8875887426323787 0.52830052431863 1.114270879395514 0.8042354686305098 0.9603687634897567 0.5826979587745231 0.7976701555473682 1.0027816092399844 0.9068714448763711 0.8252455881263536 1.0 9.787676524763489 -8.253133256479531 24.0153411836466 0.9583007707002238 0.8082796488499409 0.11532418756414664 0.1585508307109152 460.639851327825 1331839.6315859256 0.023331722676080354 0.029846814105310853 5.582988631655827e-09 8.253133256479531 -0.15002112185028293 (ac)MDLAAAAEPGAGS(ph)QHLEVR ddPTM_A549_PD325901_60min_R1 4 MDLAAAAEPGAGSQHLEVR 19 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR 76.71300000000001 8.5539e-15 9652300.0 687.8000000000001 935.0500000000001 712.74 972.69 773.27 881.34 1028.32 547.77 1405.01 971.8499999999999 1040.12 True False 757.6249496684018 1013.8499450582609 761.1108224537963 1032.7708521607312 718.9581828366794 874.1626592473457 1067.453280318295 536.8442976327481 1345.9623157538888 910.4872251430409 912.1918338639238 0.830554409218073 1.1114437856385173 0.8343758343350123 1.1321860312934953 0.7881655548167623 0.9583101128460101 1.1702070120455959 0.5885212711878233 1.4755255043805542 0.9981313045594122 1.0 9.833193444714139 -8.774490930883433 24.999687870377844 1.224553671305706 0.9411993037606333 0.18272611360619273 0.20323068480820036 228.56749296508596 437809.88652704214 0.037810967850168783 0.04037300452538002 1.6807730239380648e-09 8.774490930883433 -0.2833543675450726 (ac)MDLAAAAEPGAGS(ph)QHLEVRDEVAEK ddPTM_A549_MK2206_60min_R1 3 MDLAAAAEPGAGSQHLEVRDEVAEK 25 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 MDLAAAAEPGAGS(1)QHLEVRDEVAEK;MDLAAAAEPGAGS(1)QHLEVRDEVAEK;MDLAAAAEPGAGS(1)QHLEVRDEVAEK 91.66 8.5274e-26 27808300.0 2514.06 3485.89 2688.8200000000006 2727.1 4079.55 3525.33 3186.67 3104.75 4477.4 4550.6 4483.5 True False 2938.3718651342915 3663.30691155998 3070.1351074833274 3395.239622424173 3479.453599147208 3898.3780806753393 3765.6466900753926 3544.8578203981 3463.276048938583 3522.6162994710426 3370.123211694993 0.8718885573493458 1.0869949498723315 0.9109860128642633 1.0074526683896958 1.0324410653808789 1.1567464557815563 1.1173617264223026 1.0518481366190837 1.0276407808831234 1.0452485200680106 1.0 11.718585621959996 -5.247593288312051 24.206036895278935 1.02915411137481 0.8718883924699272 0.36246774054694264 0.06286906567065231 1364.4247127216747 2385254.2290090583 0.008885673047224069 0.2347359666802432 5.654662794675174e-06 5.247593288312051 -0.15726571890488272 (ac)MDLAAAAEPGAGS(ph)QHLEVRDEVAEK ddPTM_A549_PD325901_60min_R1 2 MDLAAAAEPGAGSQHLEVRDEVAEK 25 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 MDLAAAAEPGAGS(1)QHLEVRDEVAEK;MDLAAAAEPGAGS(1)QHLEVRDEVAEK 149.84 1.0847999999999998e-80 44361000.0 5614.6 6078.799999999999 5985.799999999999 6076.8 6808.7 5867.2 5932.0 7090.8 5610.3 6623.700000000001 7811.3 True False 6184.590058749939 6591.081809550457 6392.032383539488 6452.1501345858715 6330.480400739849 5819.419468463959 6157.745506114953 6949.3684313750155 5374.518601343792 6205.4784515922875 6850.559619910459 0.9027861082728268 0.9621231220868649 0.9330671854838971 0.9418427825711273 0.9240822286023097 0.84948088788986 0.8988675156140657 1.0144234656651083 0.7845371618580324 0.9058352595832743 1.0 12.742006130821702 -7.0111221214292865 23.25448524059533 0.9019367738718315 0.9362858240669751 0.032387670812854874 0.0607974251242002 694.4106229706239 1451909.0770678238 0.012057893643057932 0.02173893253470509 9.747155140660678e-08 7.0111221214292865 0.03434905019514367 (ac)MDLFGDLPEPERS(ph)PR ddPTM_A549_PD325901_60min_R1 1 MDLFGDLPEPERSPR 15 1 F8SNU6;E9PC05;Q9H0C8;F8SNU7 F8SNU6 ILKAP2;ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 MDLFGDLPEPERS(1)PR 63.708999999999996 5.0195e-05 2185200.0 575.1 629.32 456.54 646.0 556.53 497.86 609.56 634.72 658.04 474.13 674.68 True False 633.4837286337562 682.3550049987322 487.5235497980416 685.9019528275521 517.4412527242712 493.8055932249571 632.7571393640305 622.0600116717925 630.3848671957414 444.19335088446826 591.6986371488983 1.0706188739696942 1.1532137513222303 0.8239389432214603 1.1592082688115908 0.8745013428078243 0.8345559077241766 1.0693909021203305 1.0513122265570705 1.0653816446717754 0.7507087611775063 1.0 9.208718761927397 (ac)MDLFGDLPEPERS(ph)PRPAAGK ddPTM_A549_MK2206_60min_R1 7 MDLFGDLPEPERSPRPAAGK 20 2 F8SNU6;E9PC05;Q9H0C8;F8SNU7 F8SNU6 ILKAP2;ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK 169.88 2.9619999999999994e-98 654591000.0 47727.76 50728.33 43700.97 42432.79 61735.17 47042.3 43153.08 43691.020000000004 68644.07 66879.31 65345.19 True False 55783.03905630014 53310.18531878384 49898.42467256106 52828.82545488036 52654.008273085165 52020.28496184854 50993.436053484904 49884.35588313707 53096.29774705492 51771.22742130196 49118.175887502985 1.1356903640734117 1.085345380921351 1.0158851335775396 1.0755453454923896 1.0719862316076316 1.0590842192713417 1.0381785384350772 1.0155987062180178 1.0809908305361984 1.054013641302058 1.0 15.583969363569457 (ac)MDLFGDLPEPERS(ph)PRPAAGK ddPTM_A549_PD325901_60min_R1 8 MDLFGDLPEPERSPRPAAGK 20 2 F8SNU6;E9PC05;Q9H0C8;F8SNU7 F8SNU6 ILKAP2;ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK 172.98 2.2611e-75 476090900.0 35084.2 37016.119999999995 39562.0 38771.4 42329.200000000004 42296.6 37023.7 39798.0 40475.899999999994 43000.200000000004 47035.799999999996 True False 38645.92215637705 40135.598340484445 42246.915225632176 41166.22132176186 39356.14301981245 41952.15051299306 38432.657163646036 39004.197669072986 38774.838681733796 40285.160033539985 41250.694784502484 0.9368550604606052 0.9729678142430471 1.0241503918014967 0.9979521929707629 0.9540722459442841 1.0170047009427368 0.9316850871099713 0.945540381145932 0.9399802569216641 0.9765934911882929 1.0 15.332130798391898 -7.758429417572261 24.99716612041503 0.9658377609234321 0.9844613507926939 0.1313400035162703 0.02964639592567795 193.60051398193127 1607798.0511737221 0.00527094363712337 0.0076340163841850895 1.7440967886117115e-08 7.758429417572261 0.018623589869261825 (ac)MDNLS(ph)SEEIQQR ddPTM_A549_MK2206_60min_R1 3 MDNLSSEEIQQR 12 0 H3BNG6;H3BU94;H3BNE1;H3BR18;H3BM38;H3BPJ0;O00161-2;O00161 H3BNG6 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 1 MDNLS(0.876)S(0.124)EEIQQR;MDNLS(0.829)S(0.171)EEIQQR;MDNLS(0.914)S(0.086)EEIQQR 130.01 2.1299000000000003e-09 6127200.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 120.6 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 93.35637623966238 0.0 0.0 (ac)MDNLS(ph)SEEIQQR ddPTM_A549_PD325901_60min_R1 3 MDNLSSEEIQQR 12 0 H3BNG6;H3BU94;H3BNE1;H3BR18;H3BM38;H3BPJ0;O00161-2;O00161 H3BNG6 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 1 MDNLS(0.904)S(0.096)EEIQQR;MDNLS(0.945)S(0.055)EEIQQR;MDNLS(0.935)S(0.065)EEIQQR 150.06 1.6441e-17 11054200.0 0.0 0.0 0.0 0.0 0.0 0.0 110.61 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 114.81932407811448 0.0 0.0 0.0 0.0 0.0 (ac)MDPQPPPPAQGS(ph)PPHR ddPTM_A549_MK2206_60min_R1 1 MDPQPPPPAQGSPPHR 16 0 Q8NAF0 Q8NAF0 ZNF579 Zinc finger protein 579 1 MDPQPPPPAQGS(1)PPHR 44.601000000000006 0.010081 1705400.0 363.97 0.0 179.4 213.83 471.32 311.72 311.98 206.79 367.91 314.03 488.06 True False 425.3992377878523 0.0 204.84161761758276 266.21835959919326 401.9894523538289 344.7060034970107 368.66272766546933 236.10311576781493 284.5789724315437 243.09040489669303 366.8612322292536 1.1595644358573653 0.0 0.558362671282683 0.7256650095773324 1.095753426741541 0.9396086945529368 1.0049105636626385 0.6435760855218216 0.7757128511570521 0.662622222085283 1.0 8.519090646757798 -6.428637525476278 3.595347215446197 0.8965837269341835 0.5182216543969533 0.16848996218339907 0.28321368291725707 0.2347886669642621 5.622358690781909 0.03612299030531066 0.0880096849009177 3.7270264470251934e-07 6.428637525476278 -0.3783620725372302 (ac)MDPQRS(ph)PLLEVK ddPTM_A549_MK2206_60min_R1 6 MDPQRSPLLEVK 12 1 Q9BW19;A2AB20;A0A140T9E6 Q9BW19 KIFC1 Kinesin-like protein KIFC1 1 MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK 98.105 2.4157e-05 107547100.0 15368.83 15722.230000000003 14518.130000000001 12440.02 20211.59 14348.94 13461.05 14864.220000000001 21529.4 21144.430000000004 22956.479999999996 True False 17962.712772182 16522.424351926104 16577.019141484714 15487.825458453717 17238.49188513137 15867.335306744502 15906.748542346526 16971.268704764603 16653.02527538714 16367.888577555603 17255.752449383708 1.0409695447864136 0.9575023981360027 0.9606662584033978 0.8975456447862329 0.9989997211478915 0.9195388814998448 0.9218229450732899 0.9835136864965129 0.9650709422400126 0.9485467889950047 1.0 14.074789764439995 -10.1069353899814 0.6995027710530299 0.9988599026049454 0.9571927515244085 0.0 0.040499658066676714 0.9950952925500792 0.9493810498308195 0.02087230398696819 0.00777278695706767 7.817440960582908e-11 10.1069353899814 -0.04166715108053687 (ac)MDPQRS(ph)PLLEVK ddPTM_A549_PD325901_60min_R1 4 MDPQRSPLLEVK 12 1 Q9BW19;A2AB20;A0A140T9E6 Q9BW19 KIFC1 Kinesin-like protein KIFC1 1 MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK 96.64 4.2958e-06 138018000.0 15050.7 15703.5 17402.4 17087.9 19542.5 16614.5 19025.0 19447.4 17581.2 18532.199999999997 21073.5 True False 16578.635984260272 17026.88905643804 18583.431513132335 18143.380773563367 18169.902217965027 16479.197020519925 19749.006785879472 19059.506350809843 16842.3233042699 17362.07372927495 18481.593095922963 0.8970350065718912 0.921289034341643 1.0055102618416503 0.9817000449796611 0.9831350643670056 0.8916545740937903 1.0685770800914398 1.0312696666292458 0.9113025709880667 0.9394251696356751 1.0 14.173801500617651 -5.590763080510058 6.262275000366176 0.9706998962366228 0.9027420309893835 0.22409398877598163 0.04898471331638825 0.2311918689077961 15.87990271531722 0.007200613310104392 0.02893723471933977 2.565883414198234e-06 5.590763080510058 -0.06795786524723924 (ac)MDRNPS(ph)PPPPGR ddPTM_A549_MK2206_60min_R1 6 MDRNPSPPPPGR 12 1 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR 84.479 4.0056e-12 250486000.0 1881.84 2016.6599999999999 1534.17 2511.2 2113.09 2069.77 1980.67 1529.0 1880.4 3255.3300000000004 2769.57 True False 2199.448585429272 2119.2993801486987 1751.7383751413984 3126.44411273205 1802.2572601933973 2288.79168759787 2340.5321007922485 1745.7404323661158 1454.4924023817648 2519.9486920751265 2081.809332756575 1.056508178161027 1.0180083962552335 0.8414499577739325 1.501791765239254 0.8657167742672113 1.09942426118689 1.124277840417351 0.8385688376440017 0.6986674425442391 1.2104608488513213 1.0 11.023622226842724 -8.26805964667653 23.933007678387938 0.8522930044128084 1.0710739501268856 0.03776637651128423 0.20471040158177561 319.7269190051201 1155846.8843639977 0.029902642182627632 0.03659214273186272 5.394365303790284e-09 8.26805964667653 0.21878094571407714 (ac)MDRNPS(ph)PPPPGR ddPTM_A549_PD325901_60min_R1 6 MDRNPSPPPPGR 12 1 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR 88.021 4.1615e-12 315921000.0 3677.54 3909.3899999999994 3733.71 4757.18 5299.51 4639.75 3934.36 4946.85 4103.75 4615.84 4507.0 True False 4050.8811535381396 4238.848015305396 3987.102013222162 5051.020204260334 4927.290699916991 4601.96541430421 4084.0842227644 4848.18119602125 3931.2836586750404 4324.3950746558185 3952.667572226957 1.0248474174760536 1.0724018495988024 1.00871169668736 1.2778762979590916 1.246573512667276 1.1642682644600528 1.0332475848616336 1.2265593064507965 0.9945900045573859 1.0940447167985412 1.0 11.948610911191633 -8.790432124718933 24.773352850646194 0.9974452339412164 1.1322178975555537 0.17387332993510052 0.09230509588474013 162.1395319226932 138542.18638799226 0.015549977956946822 0.01655556106248806 1.6201971924848218e-09 8.790432124718933 0.13477266361433726 (ac)MDRNPS(ph)PPPPGRDKEEEEEVAGGDCIGSTVYSK ddPTM_A549_MK2206_60min_R1 2 MDRNPSPPPPGRDKEEEEEVAGGDCIGSTVYSK 33 3 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 MDRNPS(0.997)PPPPGRDKEEEEEVAGGDCIGS(0.002)T(0.001)VYSK;MDRNPS(0.999)PPPPGRDKEEEEEVAGGDCIGS(0.001)TVYSK 48.449 3.5637000000000003e-10 145638000.0 1800.8 1987.31 1773.9699999999998 1694.5300000000002 2382.5 2198.4 2412.8 1940.49 2710.0 2945.5 3220.1000000000004 True False 2104.7310146670475 2088.455590512686 2025.545620986975 2109.689926070342 2032.0374060786662 2431.0332288201853 2851.174528210926 2215.56040000139 2096.1893269807397 2280.1095042614065 2420.4602997611355 0.869558164153634 0.8628340612398337 0.8368431497045695 0.8716069114120724 0.8395251953850261 1.0043681480998028 1.1779472394123942 0.9153467215388882 0.8660292123723753 0.9420148326689847 1.0 11.241065716060838 -7.250450938363971 23.929265728414844 0.9578084608697147 0.8562436911350749 0.38830067659240874 0.07627552499691839 483.8784356480048 1053728.4118663163 0.013184829876935502 0.02268693921724663 5.6175773575154254e-08 7.250450938363971 -0.10156476973463979 (ac)MDRNPS(ph)PPPPGRDKEEEEEVAGGDCIGSTVYSK ddPTM_A549_PD325901_60min_R1 4 MDRNPSPPPPGRDKEEEEEVAGGDCIGSTVYSK 33 3 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 MDRNPS(0.997)PPPPGRDKEEEEEVAGGDCIGS(0.002)T(0.001)VYSK;MDRNPS(0.999)PPPPGRDKEEEEEVAGGDCIGSTVYSK;MDRNPS(1)PPPPGRDKEEEEEVAGGDCIGSTVYSK;MDRNPS(1)PPPPGRDKEEEEEVAGGDCIGSTVYSK 66.51100000000001 1.1115e-51 444512000.0 20461.6 22293.1 22218.8 18939.3 21313.699999999997 24835.5 25119.4 27554.9 18614.1 23116.3 27048.7 True False 22538.846568966204 24171.817774641237 23726.701380498365 20109.137546728878 19816.699240273312 24633.247922183782 26075.332512863104 27005.29590309913 17831.814109276413 21656.73287294757 23721.881375836565 0.9501289637138386 1.018967146478651 1.0002031881276798 0.8477041609023609 0.8353763736656602 1.038418813917329 1.099210138510506 1.1384129055888077 0.7517031986948617 0.9129433087464731 1.0 14.533930813714704 -8.768107421949585 24.99994571457054 0.8827487507523248 0.9875048294879636 0.1660684105229696 0.10220812236078679 247.1631593053786 926666.1531366613 0.02195005918221128 0.023629850057752304 1.705660444815372e-09 8.768107421949585 0.10475607873563875 (ac)MDRS(ph)GFGEISSPVIR ddPTM_A549_MK2206_60min_R1 2 MDRSGFGEISSPVIR 15 1 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 MDRS(1)GFGEISSPVIR;MDRS(0.998)GFGEIS(0.001)S(0.001)PVIR 75.669 9.9353e-10 4266000.0 710.71 767.66 684.91 592.28 1005.6200000000001 586.06 862.8499999999999 748.12 1227.24 961.5699999999999 1178.45 True False 830.6604728087607 806.7306150590332 782.0405369144851 737.3886265884591 857.6946301367592 648.0764802048568 1019.6186760886919 854.1683010214111 949.2720994995728 744.3506691606317 885.8083414345858 0.9377428885615234 0.9107281759759853 0.88285524117774 0.832447146968883 0.9682620833618525 0.7316215595297769 1.1510601429169174 0.9642811667793363 1.0716450219493374 0.8403066829954882 1.0 9.790850772558633 -7.769370252064593 24.999989809856793 1.036361707200534 0.8811483563059712 0.2943662034568858 0.09330096924945419 99.21685491833344 312754.793626309 0.010437091647153547 0.014561410312454321 1.7007079738880813e-08 7.769370252064593 -0.15521335089456278 (ac)MDRS(ph)GFGEISSPVIR ddPTM_A549_PD325901_60min_R1 2 MDRSGFGEISSPVIR 15 1 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 MDRS(1)GFGEISSPVIR;MDRS(0.768)GFGEIS(0.199)S(0.033)PVIR 80.706 3.5637e-07 11942700.0 1549.5500000000002 2187.12 2355.33 2153.77 2447.73 2190.5299999999997 2017.58 1887.9699999999998 2044.7800000000002 2743.76 3038.65 True False 1706.8591752815812 2371.4362780983074 2515.1768575498763 2286.8034813334334 2275.809889010081 2172.691049947907 2094.3601109621386 1850.312957266186 1958.8450075139938 2570.5185253469895 2664.915313589405 0.6404928391448932 0.8898730349911919 0.9438111765593616 0.858114878800149 0.8539895723533393 0.8152945944918168 0.7859011880348352 0.6943233609828968 0.7350496271026351 0.9645779407093912 1.0 11.379873972015822 -10.892149967375065 1.1733469518813942 0.9987384985091838 0.803072485331039 0.4065168223263975 0.083804410103351 0.38578317276210555 0.9529228054374521 0.05999759471209738 0.014761912130999243 1.2818878541385492e-11 10.892149967375065 -0.1956660131781448 (ac)MDS(ph)AGQDINLNSPNKGLLSDSMTDVPVDTGVAAR ddPTM_A549_PD325901_60min_R1 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAAR 34 1 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;A0A087WYR3 O43399-2 TPD52L2 Tumor protein D54 1 MDS(0.492)AGQDINLNS(0.492)PNKGLLS(0.013)DS(0.002)MTDVPVDTGVAAR 55.364 2.6082e-06 3442300.0 526.17 526.79 492.58 594.52 443.26 865.46 558.11 802.13 790.54 650.99 844.38 True False 579.5863910541188 571.1844420696656 526.0094409241669 631.2421501471152 412.1269467639852 858.4119807023482 579.3491814595104 786.1308878911881 757.3163529769027 609.8863803013514 740.5266129658305 0.782667875679523 0.7713219647597206 0.7103180786676713 0.852423314833983 0.5565322562998848 1.1591912642604205 0.7823475501294953 1.0615835732664773 1.022672703069818 0.8235846890886728 1.0 9.532407773639843 -7.265625501720025 24.9998651131466 1.0054459767198334 0.741880768986868 0.4863408511054834 0.1206279973936127 171.91054845249784 1026664.0902696099 0.014257526110613207 0.023290373280597878 5.424684670124198e-08 7.265625501720025 -0.2635652077329653 (ac)MDS(ph)DGEREDSAAER ddPTM_A549_PD325901_60min_R1 1 MDSDGEREDSAAER 14 1 I3L4V0 I3L4V0 NAA38 1 MDS(0.999)DGEREDS(0.001)AAER 49.5 0.004594300000000001 1756400.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MDSAGQDINLNS(ph)PNK ddPTM_A549_MK2206_60min_R1 5 MDSAGQDINLNSPNK 15 0 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;A0A087WYR3 O43399-2 TPD52L2 Tumor protein D54 1 MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK 128.22 7.8362e-46 25984300.0 6772.0 7346.5199999999995 6969.2699999999995 6373.960000000001 9479.6 8047.509999999998 6553.57 7489.54 10619.34 10584.83 10810.800000000001 True False 7914.948040496023 7720.426488476006 7957.617282127598 7935.580486137936 8085.163397550191 8899.092166695202 7744.268838215881 8551.205230754296 8214.076445601348 8193.709551516298 8126.179997098748 0.9740059958457553 0.9500683582239619 0.9792568322346624 0.9765450050295637 0.9949525361777366 1.0951138382207142 0.9530023751603806 1.0523032019727958 1.0108164535530817 1.0083101228918951 1.0 12.988361605672845 -6.814067586580178 3.8636063649019086 1.011530966724772 0.9686172924749007 0.3005197372889944 0.03415837828823062 0.22677333647788997 6.940079104295118 0.004600317061397687 0.009245528157072922 1.5343781783753945e-07 6.814067586580178 -0.04291367424987136 (ac)MDSAGQDINLNS(ph)PNK ddPTM_A549_PD325901_60min_R1 5 MDSAGQDINLNSPNK 15 0 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;A0A087WYR3 O43399-2 TPD52L2 Tumor protein D54 1 MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDSAGQDINLNS(1)PNK;MDS(0.01)AGQDINLNS(0.99)PNK 148.57 8.689e-55 26584900.0 11753.98 12780.339999999998 13460.52 12560.7 14024.380000000001 13923.4 12736.75 12577.849999999999 14448.689999999999 14379.25 14979.64 True False 12947.23539677726 13857.384104407132 14374.031831882283 13336.54591158055 13039.355930284477 13810.012446688554 13221.45399106703 12326.97491461755 13841.46180597295 13471.341701021845 13137.239243761673 0.9855370033643379 1.0548170621911621 1.0941440256336894 1.015171122647669 0.9925491717353266 1.0512111555893566 1.006410383927913 0.9383230894931839 1.0536050648956312 1.025431709894362 1.0 13.681374508496916 (ac)MDSAGQDINLNS(ph)PNKGLLSDSMTDVPVDTGVAAR ddPTM_A549_MK2206_60min_R1 1 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAAR 34 1 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;A0A087WYR3 O43399-2 TPD52L2 Tumor protein D54 1 MDS(0.402)AGQDINLNS(0.577)PNKGLLS(0.009)DS(0.011)MT(0.001)DVPVDTGVAAR 56.933 4.1053e-09 8817100.0 413.68 453.43 399.93 275.82 777.64 424.96 585.56 394.97 930.89 587.29 527.96 True False 483.4990704950375 476.5076502438807 456.6460877023402 343.39591238203025 663.2501861334786 469.9289851343822 691.94867238859 450.95820704489506 720.0449013258673 454.62078110938097 396.85296104527475 1.2183330300006951 1.2007158746876996 1.1506682134853568 0.8652975940447981 1.67127437927271 1.1841387900864637 1.7435895414917906 1.1363357497878106 1.8143871206840292 1.1455647953638823 1.0 8.63246075970017 -6.759508820771027 24.999921453827668 1.4024816777838165 1.1183163466155734 0.1960373833867528 0.2674175687256023 78.57100933890703 1017432.9360163154 0.04628286923646998 0.09263909855267635 1.739767362002428e-07 6.759508820771027 -0.28416533116824305 (ac)MDSAGQDINLNS(ph)PNKGLLSDSMTDVPVDTGVAAR ddPTM_A549_PD325901_60min_R1 4 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAAR 34 1 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;A0A087WYR3 O43399-2 TPD52L2 Tumor protein D54 1 MDS(0.033)AGQDINLNS(0.96)PNKGLLS(0.003)DS(0.004)MTDVPVDTGVAAR;MDS(0.015)AGQDINLNS(0.984)PNKGLLSDSMTDVPVDTGVAAR;MDS(0.458)AGQDINLNS(0.518)PNKGLLS(0.022)DS(0.001)MTDVPVDTGVAAR;MDS(0.337)AGQDINLNS(0.638)PNKGLLS(0.015)DS(0.007)MT(0.002)DVPVDTGVAAR 97.613 1.948e-51 98398000.0 4525.93 5410.900000000001 4264.76 4698.4 5215.599999999999 5568.2 5457.52 5602.0 5813.9 6859.9 6538.2 True False 4985.399081786436 5866.8955325552015 4554.192259685231 4988.609497159397 4849.274248843208 5522.854425330827 5665.208910069537 5490.263715316014 5569.562001381861 6426.764743282141 5734.042849064636 0.8694387560427242 1.0231691124373508 0.7942375701688612 0.8699986429248888 0.8456989904835196 0.963169367705674 0.9879955659894784 0.9574856449165899 0.9713150298990866 1.1208086358005687 1.0 12.48533697017915 -7.3990117772180515 5.143013196724755 0.9832690521222721 0.8833889377250256 0.4323725210995861 0.06699911724276222 0.15754995717439893 6.003418746054523 0.007678201318221786 0.012351393019202133 3.990140817329143e-08 7.3990117772180515 -0.09988011439724653 (ac)MDT(ph)PLRR ddPTM_A549_MK2206_60min_R1 4 MDTPLRR 7 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 MDT(1)PLRR;MDT(1)PLRR;MDT(1)PLRR;MDT(1)PLRR 63.565 0.0033780999999999998 927843000.0 1826.4499999999998 2327.27 1911.23 1545.3 2426.3 1820.58 1711.31 1876.92 2908.45 2778.37 2863.23 True False 2134.710107584754 2445.7181024261217 2182.2711529501257 1923.8985693711518 2069.394484100175 2013.2325671968022 2022.2328754445623 2142.9791578264294 2249.6907188402706 2150.734287338232 2152.2109698720765 0.9918684262220062 1.1363747033458764 1.0139671173034843 0.8939172768390381 0.9615202752280256 0.9354252884030533 0.9396071778059751 0.9957105450279367 1.0452928408658693 0.9993138764951411 1.0 11.071603789262051 -14.737542261920003 13.11591728575967 1.0112975179363248 1.0043671463244872 0.0 0.06212208698766272 0.0 0.0 0.0 0.008626363324596788 1.830028014569238e-15 14.737542261920003 -0.006930371611837627 (ac)MDT(ph)PLRR ddPTM_A549_PD325901_60min_R1 5 MDTPLRR 7 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 MDT(1)PLRR;MDT(1)PLRR;MDT(1)PLRR;MDT(1)PLRR;MDT(1)PLRR 69.19800000000001 0.0027084 1261840900.0 3482.51 3388.06 2918.56 2889.6400000000003 4117.52 3313.1200000000003 3115.84 3524.9799999999996 3798.2100000000005 3555.66 4290.870000000001 True False 3836.0518515116364 3673.5837065976034 3116.6310323270063 3068.1264999514083 3828.319599872859 3286.1390491814354 3234.4149962530723 3454.6715086066833 3638.58444233107 3331.155020787269 3763.1201920660064 1.0193806351440478 0.9762068493966316 0.8282039566256669 0.8153145111920975 1.0173258903460793 0.8732484963169084 0.8595035053816159 0.9180337943737108 0.9669062524238524 0.8852109023279476 1.0 11.877713653719328 -8.881724939819161 2.4235080581057473 0.986962775922088 0.9092892256378993 0.0 0.07266181205172283 0.3269809579401313 3.7389679186383016 0.012495083176759451 0.013026593880181804 1.3130312433704675e-09 8.881724939819161 -0.07767355028418876 (ac)MDVAES(ph)PERDPHSPEDEEQPQGLSDDDILR ddPTM_A549_MK2206_60min_R1 2 MDVAESPERDPHSPEDEEQPQGLSDDDILR 30 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 MDVAES(0.5)PERDPHS(0.5)PEDEEQPQGLS(0.001)DDDILR;MDVAES(0.965)PERDPHS(0.035)PEDEEQPQGLSDDDILR 63.49100000000001 3.0930999999999996e-09 67984000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MDVAES(ph)PERDPHSPEDEEQPQGLSDDDILR ddPTM_A549_PD325901_60min_R1 2 MDVAESPERDPHSPEDEEQPQGLSDDDILR 30 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 MDVAES(0.984)PERDPHS(0.016)PEDEEQPQGLSDDDILR;MDVAES(0.867)PERDPHS(0.133)PEDEEQPQGLSDDDILR 70.45100000000001 4.1595e-06 102173000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MEAAGS(ph)PAATETGK ddPTM_A549_MK2206_60min_R1 1 MEAAGSPAATETGK 14 0 Q9BRP8 Q9BRP8 WIBG Partner of Y14 and mago 1 MEAAGS(0.996)PAAT(0.004)ET(0.001)GK 43.184 0.0013679 831210.0 313.63 387.5 348.7 424.73 364.94 399.7 337.1 414.59 571.13 512.77 379.56 True False 366.56307648268864 407.22209485367927 398.1509033626037 528.7888690668542 311.2578094330946 441.9959887006129 398.3467065069228 473.3594021286252 441.7699669071991 396.9349008657687 285.3047766769158 1.2848122655085834 1.4273230879510468 1.3955283469139979 1.8534175110067088 1.0909659945356207 1.5492064095412499 1.3962146415726424 1.6591359164822739 1.5484141978017676 1.3912662293602776 1.0 8.15636009102457 -10.73387893086134 0.9576240239920644 0.9962927652260014 1.4722654767945613 0.10044292890412554 0.2183782081718743 0.3839232606552646 0.61809962458148 0.12595733032352285 0.03149885677721926 1.8455298295049166e-11 10.73387893086134 0.4759727115685599 (ac)MEAAGS(ph)PAATETGK ddPTM_A549_PD325901_60min_R1 1 MEAAGSPAATETGK 14 0 Q9BRP8 Q9BRP8 WIBG Partner of Y14 and mago 1 MEAAGS(0.999)PAAT(0.001)ETGK 59.542 2.0275e-05 1182800.0 555.83 592.71 541.88 631.07 845.51 563.04 638.17 608.68 662.69 651.59 717.16 True False 612.2574524195805 642.6597518159258 578.6552353891504 670.049760636043 786.12429445115 558.4547889153171 662.4559085700234 596.5393998997775 634.8394438665524 610.4484961989549 628.9538664518054 0.9734536745494285 1.0217915591193374 0.9200281073929781 1.0653400771921109 1.249891822568815 0.887910574531955 1.0532662948829892 0.9484628868967901 1.0093577251507333 0.9705775395622462 1.0 9.296810389578665 (ac)MEDKVT(ph)SPEKAEEAK ddPTM_A549_PD325901_60min_R1 2 MEDKVTSPEKAEEAK 15 2 P56211-2;H3BTD3 P56211-2 ARPP19 cAMP-regulated phosphoprotein 19 1 MEDKVT(0.616)S(0.384)PEKAEEAK;MEDKVT(0.572)S(0.428)PEKAEEAK 61.167 0.00049206 73759000.0 24976.3 26482.0 24157.5 25369.0 29585.0 28520.0 26519.1 28538.0 27522.0 28839.0 31416.0 True False 27511.875589419746 28713.731078587094 25796.97322084854 26935.98551282069 27507.05166270925 28287.74257577587 27528.29886230834 27968.787202372096 26365.3460503331 27018.10061830548 27552.031162432253 0.9985425548927492 1.0421638575140275 0.9363002338652705 0.9776406448591872 0.9983674706428057 1.0267026198179818 0.9991386370034209 1.0151261457815168 0.9569293056797489 0.9806210097187028 1.0 14.749871059142672 -8.749421794670615 24.99394217216019 0.9796610591993054 0.9987419956191943 0.09635709399014902 0.027322320924586217 453.6144165192383 943417.259856847 0.005018836419231266 0.005669474546396901 1.7806485292462554e-09 8.749421794670615 0.01908093641988895 (ac)MEDLDQS(ph)PLVSSSDS(ph)PPRPQPAFK ddPTM_A549_PD325901_60min_R1 3 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 2 MEDLDQS(0.975)PLVS(0.048)S(0.174)S(0.205)DS(0.598)PPRPQPAFK;MEDLDQS(1)PLVS(0.112)S(0.06)S(0.228)DS(0.601)PPRPQPAFK;MEDLDQS(0.999)PLVS(0.025)S(0.067)S(0.223)DS(0.685)PPRPQPAFK 85.745 3.1798e-23 15137600.0 3011.6800000000003 4312.88 3759.51 3454.05 3996.4500000000003 4194.33 3448.89 4233.969999999999 4523.9 3909.1500000000005 4011.99 True False 3317.4235365183663 4676.341533653677 4014.652956370167 3667.3988237832937 3715.753139004035 4160.172767105679 3580.1393962550233 4149.52014686479 4333.776215286023 3662.3256018602874 3518.540664100032 0.9428407550796043 1.3290571234167579 1.1409994482462604 1.0423067896307336 1.0560495085124861 1.1823574499372065 1.017506897897611 1.1793298821874352 1.2316970667708658 1.040864935632919 1.0 11.780761471134221 -11.098164555001691 1.4565928244380826 1.0005337227146942 1.1405728915377755 0.1125070765294689 0.10415891402422944 0.5336140164637493 2.03629767233531 0.07142290238616711 0.015851550500841322 7.976923828451466e-12 11.098164555001691 0.14003916882308132 (ac)MEDLDQS(ph)PLVSSSDSPPRPQPAFK ddPTM_A549_MK2206_60min_R1 1 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.374)PLVS(0.045)S(0.147)S(0.147)DS(0.288)PPRPQPAFK 43.799 0.00024813 2719300.0 1103.2 1121.9 1242.3 1122.6 1795.6 1135.4 1222.5 1042.0 2324.6 2237.0 2161.7 True False 1289.3931893495583 1178.9999179776585 1418.4768203251 1397.6370503954295 1531.4696186169367 1255.5472743824776 1444.6124257036881 1189.7066909911653 1798.0818116234036 1731.6601463360253 1624.8902301151036 0.7935263351655579 0.7255874250004819 0.8729677820911129 0.8601424419275535 0.942506509198748 0.7726966727429565 0.8890523180764986 0.7321766535003962 1.1065866347759574 1.0657090025172706 1.0 10.666126544453865 -8.767619284607736 24.999979499801945 1.0503325864802933 0.8276307157704436 0.7053618753426325 0.06723167862291797 61.531643169556986 248917.35869984527 0.012313283033655848 0.013268862668353447 1.707578647039224e-09 8.767619284607736 -0.2227018707098497 (ac)MEDLDQSPLVSS(ph)SDSPPRPQPAFK ddPTM_A549_PD325901_60min_R1 1 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.001)PLVS(0.045)S(0.318)S(0.318)DS(0.318)PPRPQPAFK 54.441 2.0901e-05 3264700.0 1795.1 1462.6 1309.8 1184.6 1703.9 1763.1 1366.9 1850.4 1577.9 1378.0 1598.2 True False 1977.3372305172256 1585.8584349951464 1398.6909044672418 1257.7700515782021 1584.2239421358888 1748.741898153941 1418.918127496381 1813.492320389281 1511.586350295059 1290.9928448290489 1401.631531824524 1.4107396884424377 1.1314374705389307 0.9979019968582938 0.8973614127679795 1.1302713346307796 1.2476473726854436 1.012333195479239 1.2938438378513302 1.078447734639221 0.9210643564421991 1.0 10.45289142068925 -14.999999995056527 0.020335998641893796 2.5842656903825165e-07 1.8913268241369523 0.17293454264905028 0.13966995606367358 3800.841177702846 6.0028873015144315 375.2027963616979 206.63100821897524 1.0000000113827677e-15 14.999999995056527 1.8913265657103833 (ac)MEDLDQSPLVSSS(ph)DSPPR ddPTM_A549_PD325901_60min_R1 1 MEDLDQSPLVSSSDSPPR 18 0 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.001)PLVS(0.05)S(0.05)S(0.449)DS(0.449)PPR 43.798 0.001125 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MEDLDQSPLVSSSDS(ph)PPRPQPAFK ddPTM_A549_MK2206_60min_R1 10 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQSPLVS(0.014)S(0.056)S(0.21)DS(0.72)PPRPQPAFK;MEDLDQSPLVS(0.001)S(0.001)S(0.024)DS(0.974)PPRPQPAFK;MEDLDQSPLVS(0.011)S(0.042)S(0.042)DS(0.904)PPRPQPAFK;MEDLDQSPLVSSS(0.009)DS(0.991)PPRPQPAFK;MEDLDQS(0.001)PLVS(0.006)S(0.059)S(0.204)DS(0.731)PPRPQPAFK;MEDLDQSPLVSS(0.003)S(0.065)DS(0.931)PPRPQPAFK;MEDLDQSPLVSSS(0.004)DS(0.996)PPRPQPAFK;MEDLDQS(0.004)PLVS(0.02)S(0.062)S(0.062)DS(0.853)PPRPQPAFK;MEDLDQSPLVS(0.002)S(0.006)S(0.21)DS(0.783)PPRPQPAFK;MEDLDQSPLVS(0.002)S(0.001)S(0.045)DS(0.953)PPRPQPAFK 184.4 3.3737999999999992e-99 1229461600.0 24772.86 26976.260000000002 24172.7 25615.16 35896.38 28072.81 25047.93 26378.1 39069.8 36883.2 35913.2 True False 28953.913129722732 28349.23640907747 27600.75234216577 31890.875349908223 30616.070053647032 31043.456120976865 29598.814655342474 30117.276454543266 30220.552681650228 28551.25950350511 26994.961286103415 1.0725673144279617 1.0501677001356255 1.0224408936779699 1.1813639964849718 1.1341401726479863 1.1499722408180504 1.0964570143902923 1.1156628874310395 1.1194886468389675 1.0576514335733778 1.0 14.72040252734656 -10.714939189528984 0.892739402280923 0.9977149479495022 1.1056914616920017 0.2619530904111498 0.045646546837027575 0.480631759557967 0.6579328478537274 0.03456294641142676 0.008263151369016737 1.9277948266007082e-11 10.714939189528984 0.1079765137424995 (ac)MEDLDQSPLVSSSDS(ph)PPRPQPAFK ddPTM_A549_PD325901_60min_R1 9 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4 Q9NQC3-5 RTN4 Reticulon-4 1 MEDLDQS(0.001)PLVS(0.05)S(0.164)S(0.171)DS(0.615)PPRPQPAFK;MEDLDQSPLVSS(0.001)S(0.004)DS(0.994)PPRPQPAFK;MEDLDQS(0.001)PLVS(0.006)S(0.071)S(0.195)DS(0.727)PPRPQPAFK;MEDLDQSPLVS(0.001)S(0.001)S(0.044)DS(0.954)PPRPQPAFK;MEDLDQSPLVS(0.019)S(0.065)S(0.065)DS(0.85)PPRPQPAFK;MEDLDQSPLVS(0.004)S(0.026)S(0.164)DS(0.805)PPRPQPAFK;MEDLDQSPLVSSS(0.004)DS(0.996)PPRPQPAFK;MEDLDQSPLVS(0.004)S(0.002)S(0.011)DS(0.982)PPRPQPAFK;MEDLDQS(0.002)PLVS(0.002)S(0.007)S(0.035)DS(0.955)PPRPQPAFK 204.35 1.9341999999999996e-124 2281700500.0 47376.049999999996 49938.799999999996 50398.2 54792.869999999995 54980.880000000005 54431.77999999999 52352.899999999994 55399.71 54694.799999999996 59414.19999999999 64575.2 True False 52185.63171959534 54147.31793623386 53818.52492099632 58177.30113626347 51119.21266253905 53988.50563047915 54345.21825810609 54294.71932381825 52396.167762290504 55662.77727230916 56632.859775919766 0.9214726560883407 0.9561113132990195 0.9503056199870716 1.027271117271044 0.902642262192009 0.9533070702079397 0.9596057566779211 0.9587140670389439 0.9251902158853949 0.9828706777752537 1.0 15.789351762639404 -10.997403301037643 1.2703494496672918 1.0000440205950811 0.94930656493094 0.20777122220288025 0.03029588461413747 0.47601900631554295 1.365287770207112 0.020823929658292745 0.004735149871707358 1.0059970309404151e-11 10.997403301037643 -0.05073745566414112 (ac)MEDMNEYS(ph)NIEEFAEGSK ddPTM_A549_PD325901_60min_R1 3 MEDMNEYSNIEEFAEGSK 18 0 O14979-3;O14979-2;A0A087WU03 O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like 1 MEDMNEY(0.386)S(0.614)NIEEFAEGSK;MEDMNEY(0.461)S(0.539)NIEEFAEGSK;MEDMNEY(0.052)S(0.948)NIEEFAEGSK 74.257 2.7331e-05 2350000.0 151.39 0.0 396.27 365.58000000000004 182.63 335.26 289.13 185.46 364.03 225.42 514.5699999999999 True False 166.7590013525724 0.0 423.16326516508934 388.1610463075801 169.80269883929657 332.5297537150988 300.1330003680068 181.76085480944454 348.7310850484253 211.18694272958214 451.28115212798446 0.36952352334289185 0.0 0.9376931945189663 0.860131305012926 0.37626809371187764 0.736857172401458 0.6650687691093474 0.40276633303288656 0.7727579213180265 0.4679719986836255 1.0 8.817882715058307 -8.874379492641514 0.10290780190227061 1.4729019091851565 5.7421495606842585e-15 0.0 0.29230071394453977 7.335920983986059 0.586665346235251 4.177258020454205 3.7277732278586786 1.3354280906699644e-09 8.874379492641514 -1.4729019091851507 (ac)MEDSMDMDMS(ph)PLRPQNYLFGCELK ddPTM_A549_PD325901_60min_R1 1 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 MEDS(0.453)MDMDMS(0.547)PLRPQNYLFGCELK 71.17399999999999 3.7672e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MEEGGRDKAPVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A549_MK2206_60min_R1 4 MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGK 31 3 Q13200;F8WBS8;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 MEEGGRDKAPVQPQQS(0.994)PAAAPGGT(0.006)DEKPSGK;MEEGGRDKAPVQPQQS(0.999)PAAAPGGT(0.001)DEKPSGK;MEEGGRDKAPVQPQQS(0.989)PAAAPGGT(0.011)DEKPSGK;MEEGGRDKAPVQPQQS(0.999)PAAAPGGT(0.001)DEKPSGK 75.163 4.3531e-37 114882000.0 8632.099999999999 11057.2 12141.5 9676.699999999999 14022.9 8721.9 8594.5 6585.4 17790.300000000003 16837.3 18477.5 True False 10088.98744541726 11619.964250880257 13863.347270367236 12047.491934403575 11960.149986023296 9644.84566887135 10156.009400990055 7518.900616941676 13760.825455271377 13033.742235987287 13889.02679694307 0.7263998833696407 0.8366291188550211 0.9981510924450455 0.8674108064256302 0.8611222485837299 0.6944219929789573 0.7312254162563326 0.5413554690956865 0.9907695950518355 0.9384201230611761 1.0 13.761657892877885 -8.936572221221446 24.99999756169969 0.9959300789951807 0.7903506480928326 0.36839048770257987 0.1121605867223731 46.132253694226485 18182.76293698108 0.0201781078041329 0.02148105484402646 1.1572515703522587e-09 8.936572221221446 -0.2055794309023481 (ac)MEEGGRDKAPVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A549_PD325901_60min_R1 6 MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGK 31 3 Q13200;F8WBS8;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 MEEGGRDKAPVQPQQS(1)PAAAPGGTDEKPSGK;MEEGGRDKAPVQPQQS(1)PAAAPGGTDEKPSGK;MEEGGRDKAPVQPQQS(0.992)PAAAPGGT(0.008)DEKPSGK;MEEGGRDKAPVQPQQS(1)PAAAPGGTDEKPSGK;MEEGGRDKAPVQPQQS(0.993)PAAAPGGT(0.007)DEKPSGK;MEEGGRDKAPVQPQQS(1)PAAAPGGTDEKPSGK 70.178 5.6372e-29 184025000.0 14636.500000000002 15030.5 18299.9 19617.3 19461.199999999997 29434.9 23030.899999999998 25452.4 22566.6 25551.8 23174.0 True False 16122.386705178185 16297.172984544344 19541.841260238278 20829.01606687918 18094.312449495257 29195.19193351 23907.353502492042 24944.731914978456 21618.204279465415 23938.454987302543 20323.744912089544 0.7932783438739094 0.8018784458788399 0.9615275799202659 1.0248611246094255 0.8903040521204283 1.4365065129381391 1.1763261941095706 1.227368874332807 1.0636919707945096 1.1778564969619745 1.0 14.310878641320203 -5.984072125361438 1.2704080996255844 1.0790980555647436 0.7666653602640576 0.4422792255546192 0.13830534631453031 0.4898502931984735 1.2976455183068025 0.021543496106602045 0.14067185981328809 1.0373561228196173e-06 5.984072125361438 -0.31243269530068596 (ac)MEEIPAQEAAGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 MEEIPAQEAAGSPR 14 0 C9J0V9;F8WE52;C9JNK1;F8WDU5;Q8N720-2;F8WEB1;F8WCS2;C9J9R2;C9JUB9;C9IYG2;F8WEM9;C9JS03;Q8N720-4;Q8N720;Q8N720-3 C9J0V9 ZNF655 Zinc finger protein 655 1 MEEIPAQEAAGS(1)PR 89.624 2.552e-06 9189900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 104.76 0.0 160.88 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 81.032027267344 0.0 120.9290559378813 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.6700790528702089 0.0 1.0 6.918017116091373 -8.89221942094213 2.060543844492757 0.8777729260132675 6.99107331265777e-44 0.3164633172899408 0.2725520632415001 0.045576000701413835 0.3806094270245738 0.018428493127903362 0.019050446226586488 1.281682867501509e-09 8.89221942094213 -0.8777729260132675 (ac)MEEIPAQEAAGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 MEEIPAQEAAGSPR 14 0 C9J0V9;F8WE52;C9JNK1;F8WDU5;Q8N720-2;F8WEB1;F8WCS2;C9J9R2;C9JUB9;C9IYG2;F8WEM9;C9JS03;Q8N720-4;Q8N720;Q8N720-3 C9J0V9 ZNF655 Zinc finger protein 655 1 MEEIPAQEAAGS(1)PR;MEEIPAQEAAGS(1)PR 105.46 1.4240999999999999e-09 20058400.0 0.0 207.71 271.89 169.78 276.12 0.0 0.0 173.95 185.05 0.0 168.82 True False 0.0 225.2144506583084 290.3420904073894 180.2669250016437 256.7262837622876 0.0 0.0 170.48043078886488 177.27299202870944 0.0 148.05621023815294 0.0 1.5211415333138953 1.9610260855682125 1.2175573365796601 1.7339784893138595 0.0 0.0 1.1514574803356232 1.1973357398758242 0.0 1.0 7.210001195601776 (ac)MEEKDYSEADGLS(ph)ER ddPTM_A549_MK2206_60min_R1 2 MEEKDYSEADGLSER 15 1 Q9H4G0-3;Q9H4G0-2;Q4VXN2;Q4VXN1;Q4VXN0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 MEEKDYSEADGLS(1)ER;MEEKDYSEADGLS(1)ER 99.566 4.7323999999999997e-07 26622000.0 4154.6 5103.4 4928.6 4390.3 7007.7 3817.2 3879.9 3522.6000000000004 6739.7 8102.200000000001 7999.400000000001 True False 4855.794909782157 5363.141261616169 5627.549590802778 5465.923697088059 5976.876613044055 4221.133570347709 4584.82760776093 4021.9393375100585 5213.168711089334 6271.907392777715 6012.928207791442 0.8075591029824882 0.8919350233829016 0.9359083289088173 0.9090285977480016 0.9940043197754013 0.7020096406403192 0.7624949856909973 0.6688819820430424 0.8669933401722982 1.0430703936645531 1.0 12.553852018036983 -10.118353174785211 1.0687919901142167 0.9844082341597665 0.8409059562931189 0.33739011272418973 0.09590750550705887 0.47606091201559714 1.0884740587053392 0.03746122462096367 0.018919673563856664 7.614595278668205e-11 10.118353174785211 -0.1435022778666476 (ac)MEEKDYSEADGLS(ph)ER ddPTM_A549_PD325901_60min_R1 2 MEEKDYSEADGLSER 15 1 Q9H4G0-3;Q9H4G0-2;Q4VXN2;Q4VXN1;Q4VXN0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 MEEKDYSEADGLS(1)ER;MEEKDYSEADGLS(1)ER 113.65 2.8416e-14 32735000.0 5027.6 5642.8 5265.200000000001 6410.299999999999 6310.6 6368.6 5796.0 6235.6 6558.9 6335.9 7152.1 True False 5537.998250876501 6118.338559408324 5622.528134219669 6806.24967215241 5867.365226388136 6316.736233102604 6016.569951692899 6111.226066266431 6283.252242189148 5935.850192708542 6272.4370408973655 0.8829101376016694 0.9754324387021674 0.8963865396431755 1.0851045020897772 0.9354203458929772 1.0070625168361835 0.9592077070624752 0.9742985105183501 1.0017242423034725 0.9463387442561448 1.0 12.614810369429097 -3.5026325981048667 0.6186157038742232 0.9961863995176836 7.413722045292268e-19 0.23353137275296443 0.04681195302049982 18.131647819031507 0.8350267246424089 0.006540406767787751 20.69376466285123 0.0003143166607080837 3.5026325981048667 -0.9961863995176836 (ac)MEEKDYSEADGLSERT(ph)TPSK ddPTM_A549_PD325901_60min_R1 1 MEEKDYSEADGLSERTTPSK 20 2 Q9H4G0-3;Q9H4G0-2;Q4VXN2;Q4VXN1;Q4VXN0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 MEEKDYS(0.002)EADGLS(0.063)ERT(0.46)T(0.46)PS(0.015)K 72.227 2.3879e-10 43366000.0 13177.0 13235.0 13408.0 14790.0 15298.0 17586.0 15398.0 18078.0 15467.0 16571.0 20528.0 True False 14514.719339605293 14350.359898236542 14317.947508853862 15703.544709472906 14223.521255234955 17442.785446619728 15983.97931610891 17717.420108083363 14816.975777941367 15524.704231975442 18003.18613771355 0.8062305876624514 0.797101123571401 0.7953007539515601 0.8722647529915111 0.7900557793733602 0.9688721381422658 0.8878416961220684 0.9841269191217461 0.8230196402237032 0.8623309292711183 1.0 14.135964631565956 -7.2533328191508275 24.552540185771974 0.921017591888316 0.8137514199018878 0.5076813142530391 0.05335894741165171 406.2188554355182 1230323.3032883941 0.009995040289586957 0.017113738352160585 5.5804237817030584e-08 7.2533328191508275 -0.10726617198642818 (ac)MEEKDYSEADGLSERTT(ph)PSK ddPTM_A549_MK2206_60min_R1 1 MEEKDYSEADGLSERTTPSK 20 2 Q9H4G0-3;Q9H4G0-2;Q4VXN2;Q4VXN1;Q4VXN0 Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 MEEKDY(0.005)S(0.005)EADGLS(0.012)ERT(0.189)T(0.741)PS(0.048)K 49.106 7.640899999999999e-05 22911000.0 1911.6 2792.8 2119.7 1901.7 2631.3 1916.0 1849.4 1492.5 3368.7 3773.9 4392.0 True False 2234.2313458671283 2934.941590986724 2420.305333690023 2367.616585370558 2244.239255662032 2118.749848262133 2185.4120409786487 1704.0664455895537 2605.694828708492 2921.3733689126198 3301.3451869665255 0.6767639308630051 0.8890138488315803 0.7331270123600571 0.7171672307148428 0.6797953950777786 0.6417837966859103 0.6619762300550996 0.5161733623969665 0.7892827563126658 0.8849039417162412 1.0 11.688838278565944 -9.819306755681911 0.9775366461620026 0.9692998831962244 0.6990663641882782 0.5025672546372513 0.0919654269388566 0.2448521065016029 0.48096896121368177 0.032024043285518264 0.018903133815394723 1.515979206006507e-10 9.819306755681911 -0.27023351900794623 (ac)MEEQPQMQDADEPADS(ph)GGEGR ddPTM_A549_PD325901_60min_R1 1 MEEQPQMQDADEPADSGGEGR 21 0 D6RBJ6;B3KVZ3;Q9H3R5 D6RBJ6 CENPH Centromere protein H 1 MEEQPQMQDADEPADS(1)GGEGR 59.9 5.1503999999999993e-05 1088800.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 135.07 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 118.45724627927565 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 6.888222643746854 -10.632928445752034 0.679319263200112 1.082152444714398 6.834839394132852e-26 0.0 0.29327865860305147 0.06440817340675754 0.046900237562256634 0.039956722371451286 0.008142451977166855 2.328474864986929e-11 10.632928445752034 -1.082152444714398 (ac)MEES(ph)DSEKTTEKENLGPR ddPTM_A549_MK2206_60min_R1 2 MEESDSEKTTEKENLGPR 18 2 Q5VZM2-2;Q5VZM2 Q5VZM2-2 RRAGB Ras-related GTP-binding protein B 1 MEES(0.975)DS(0.024)EKTTEKENLGPR;MEES(0.908)DS(0.09)EKT(0.001)TEKENLGPR 106.86 2.424e-10 20955100.0 5048.8 5152.5 4848.1 5123.7 7018.6 5121.6 5106.6 5183.1 7191.7 7950.799999999999 7539.700000000001 True False 5900.914008691131 5414.740241893118 5535.633480333352 6379.00673001163 5986.173237483196 5663.5643125570705 6034.403119098939 5917.820297578036 5562.791432785014 6154.70875792958 5667.384404866007 1.0412058874327663 0.9554213822595183 0.9767527813325079 1.1255645063593402 1.056249728242093 0.9993259514379056 1.064759805937605 1.0441889723409277 0.9815447542271547 1.0859875240940349 1.0 12.468467344915346 -8.76327787744646 24.98214419974296 0.9912850215472583 1.0322827076724344 0.0 0.05202169971747426 69.27815953601318 941381.2147780397 0.007724833621962833 0.008425388500574593 1.7247339911683373e-09 8.76327787744646 0.04099768612517607 (ac)MEES(ph)DSEKTTEKENLGPR ddPTM_A549_PD325901_60min_R1 2 MEESDSEKTTEKENLGPR 18 2 Q5VZM2-2;Q5VZM2 Q5VZM2-2 RRAGB Ras-related GTP-binding protein B 1 MEES(0.967)DS(0.032)EKT(0.001)TEKENLGPR;MEES(0.998)DS(0.002)EKTTEKENLGPR 128.38 2.5011e-17 35142000.0 8364.5 9145.5 8737.4 9551.3 8979.1 8265.7 8753.599999999999 10248.6 8953.599999999999 10377.5 11203.0 True False 9213.657882380548 9916.223381135038 9330.372506254458 10141.262108423842 8348.438992213367 8198.386879684098 9086.72303815371 10044.183633128838 8577.311328982718 9722.262878964775 9825.102021668205 0.9377671460368369 1.0092743423188761 0.9496463737147285 1.0321788095490896 0.8497050690976831 0.8344327480369607 0.9248477031703 1.0222981513044316 0.8729997215363648 0.98953302037204 1.0 13.262256672734665 -6.737622012011215 24.999518894219246 0.9305658294322202 0.9818228714759543 0.15136422714343667 0.06186877627838905 424.0472853036278 445092.2188856869 0.009763642388719905 0.02031579867481382 1.8296919948684315e-07 6.737622012011215 0.05125704204373405 (ac)MEFDLGAALEPTSQKPGVGAGHGGDPKLS(ph)PHK ddPTM_A549_MK2206_60min_R1 12 MEFDLGAALEPTSQKPGVGAGHGGDPKLSPHK 32 2 Q9GZP8;Q9GZP8-2 Q9GZP8 IMUP Immortalization up-regulated protein 1 MEFDLGAALEPTSQKPGVGAGHGGDPKLS(0.999)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(0.999)PHK;MEFDLGAALEPT(0.005)S(0.005)QKPGVGAGHGGDPKLS(0.989)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPT(0.001)S(0.002)QKPGVGAGHGGDPKLS(0.997)PHK;MEFDLGAALEPT(0.008)S(0.008)QKPGVGAGHGGDPKLS(0.985)PHK;MEFDLGAALEPT(0.002)S(0.012)QKPGVGAGHGGDPKLS(0.986)PHK;MEFDLGAALEPTS(0.001)QKPGVGAGHGGDPKLS(0.999)PHK;MEFDLGAALEPT(0.001)S(0.001)QKPGVGAGHGGDPKLS(0.998)PHK;MEFDLGAALEPT(0.001)S(0.001)QKPGVGAGHGGDPKLS(0.997)PHK;MEFDLGAALEPT(0.021)S(0.021)QKPGVGAGHGGDPKLS(0.959)PHK 92.34 5.3516e-31 703964000.0 19919.61 22369.91 22129.149999999998 19510.480000000003 27589.800000000003 19994.04 20841.8 23138.29 31291.900000000005 34494.59999999999 33623.899999999994 True False 23281.553180293125 23508.442869389077 25267.396223534713 24290.548475858726 23531.376967987064 22109.796041830396 24628.485279371052 26418.213465541252 24204.334612896175 26702.245902459836 25274.157657569158 0.9211604001101384 0.9301375415907766 0.9997324763845327 0.961082414890458 0.931044954566066 0.8747985330070499 0.974453258266958 1.0452658333255853 0.9576712680530189 1.0565038908215796 1.0 14.625375390035863 -7.979618889862324 24.998684886250267 0.9855618980846209 0.9385465848102865 0.3830597064851725 0.040819257046131395 249.23870729115995 305705.66205823346 0.0057901454394289455 0.00799971355555295 1.0480478469902154e-08 7.979618889862324 -0.04701531327433439 (ac)MEFDLGAALEPTSQKPGVGAGHGGDPKLS(ph)PHK ddPTM_A549_PD325901_60min_R1 13 MEFDLGAALEPTSQKPGVGAGHGGDPKLSPHK 32 2 Q9GZP8;Q9GZP8-2 Q9GZP8 IMUP Immortalization up-regulated protein 1 MEFDLGAALEPT(0.001)S(0.001)QKPGVGAGHGGDPKLS(0.998)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTS(0.001)QKPGVGAGHGGDPKLS(0.999)PHK;MEFDLGAALEPT(0.005)S(0.019)QKPGVGAGHGGDPKLS(0.976)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(0.999)PHK;MEFDLGAALEPT(0.037)S(0.037)QKPGVGAGHGGDPKLS(0.926)PHK;MEFDLGAALEPT(0.017)S(0.017)QKPGVGAGHGGDPKLS(0.966)PHK;MEFDLGAALEPT(0.001)S(0.001)QKPGVGAGHGGDPKLS(0.998)PHK;MEFDLGAALEPT(0.045)S(0.045)QKPGVGAGHGGDPKLS(0.91)PHK;MEFDLGAALEPT(0.004)S(0.004)QKPGVGAGHGGDPKLS(0.992)PHK;MEFDLGAALEPT(0.002)S(0.002)QKPGVGAGHGGDPKLS(0.997)PHK;MEFDLGAALEPT(0.01)S(0.01)QKPGVGAGHGGDPKLS(0.98)PHK 135.16 3.8578e-89 943509000.0 25084.63 24830.9 23893.519999999997 26990.95 30386.070000000007 28238.710000000003 28095.68 30942.02 31995.52 28087.730000000003 31739.27 True False 27631.20317127142 26923.48708705114 25515.07795060782 28658.119680604985 28251.857269450727 28008.743308274457 29164.876476946007 30324.85713755487 30650.859561817942 26314.265934318017 27835.541001809634 0.992659103319568 0.9672341947764119 0.9166366821808509 1.0295513810470533 1.0149562843996467 1.0062223438176956 1.0477567680488031 1.0894294145597314 1.1011411475647368 0.9453477456251805 1.0 14.764640502740372 -6.851937034997457 1.1099964367087747 1.0512611759114503 0.9623614146745246 0.22687955706770857 0.04711858313987722 0.3899790479075347 0.9388278696791055 0.007245232118862598 0.020721072105628523 1.406251390878634e-07 6.851937034997457 -0.08889976123692567 (ac)MEFDLGAALEPTSQKPGVGAGHGGDPKLS(ph)PHKVQGR ddPTM_A549_MK2206_60min_R1 2 MEFDLGAALEPTSQKPGVGAGHGGDPKLSPHKVQGR 36 3 Q9GZP8;Q9GZP8-2 Q9GZP8 IMUP Immortalization up-regulated protein 1 MEFDLGAALEPT(0.001)S(0.001)QKPGVGAGHGGDPKLS(0.997)PHKVQGR;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHKVQGR 75.65899999999999 3.9225e-22 23008600.0 2508.7799999999997 2870.3999999999996 3017.5 3017.2599999999998 3894.5 2692.5 2712.3999999999996 2713.58 5084.0 4692.8 5160.2 True False 2932.200730217897 3016.4910995303253 3445.4268738074466 3756.4888354499467 3321.624209012954 2977.418562863148 3205.2079701257094 3098.2382749902176 3932.482117479733 3632.693220708854 3878.7799257251054 0.7559595507780058 0.7776907061739053 0.8882759372235725 0.9684717636429715 0.8563579972617302 0.767617297159891 0.8263443741337098 0.7987661930603159 1.0138451246997697 0.9365556412767482 1.0 11.921387207200137 -8.76697895777115 24.999614090228658 1.0065379893555573 0.8334403138504107 0.5453915906640836 0.06138991923197572 62.8105945591107 283457.68581367633 0.010666062847822972 0.01151167236875303 1.7100981699429643e-09 8.76697895777115 -0.17309767550514654 (ac)MEFDLGAALEPTSQKPGVGAGHGGDPKLS(ph)PHKVQGR ddPTM_A549_PD325901_60min_R1 4 MEFDLGAALEPTSQKPGVGAGHGGDPKLSPHKVQGR 36 3 Q9GZP8;Q9GZP8-2 Q9GZP8 IMUP Immortalization up-regulated protein 1 MEFDLGAALEPTS(0.001)QKPGVGAGHGGDPKLS(0.998)PHKVQGR;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHKVQGR;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHKVQGR;MEFDLGAALEPTS(0.001)QKPGVGAGHGGDPKLS(0.998)PHKVQGR 72.547 1.1878e-21 61386000.0 6952.3 7956.000000000001 7846.7 9171.0 8107.0 9504.0 9142.2 9047.0 9342.599999999999 9583.3 10039.8 True False 7658.092377987241 8626.480041584427 8379.224248040238 9737.471841147806 7537.592287631696 9426.60257504116 9490.111423803799 8866.550487765795 8949.963011766658 8978.208802503794 8804.968247535888 0.8697467341952533 0.9797286939675891 0.9516472987151549 1.105906525429309 0.8560612685617722 1.0706004053653733 1.07781324781718 1.006994033197921 1.016467380705359 1.0196753185358036 1.0 13.104102086083124 -4.11778321049162 0.8994591268876916 1.0121008971679892 7.787438977555341e-13 0.3061987701667135 0.06314081326283826 12.068088585614348 1.5010542290292044 0.008626215835793271 19.36858319800205 7.624595167606315e-05 4.11778321049162 -1.0121008971672105 (ac)MEFS(ph)ERKR ddPTM_A549_MK2206_60min_R1 1 MEFSERKR 8 2 Q8N7W2 Q8N7W2 BEND7 BEN domain-containing protein 7 1 MEFS(1)ERKR 43.308 0.015658000000000002 11532000.0 1890.3 1665.8 1072.3 1125.5 1825.7 1377.2 1406.7 1630.3 2163.0 2271.7 2528.0 True False 2209.336426602131 1750.5821047929253 1224.368264054258 1401.247550525615 1557.1419484901667 1522.934389888627 1662.2791813802671 1861.400017584355 1673.0839536012315 1758.5213922358284 1900.2278307494014 1.162669228842325 0.9212485347625607 0.644327087647905 0.737410287256449 0.8194501329222558 0.8014483133256819 0.8747788841323867 0.9795667590292404 0.8804649245356068 0.9254266061045493 1.0 10.891956687737848 -9.954200276462547 0.47311867406402475 1.005414495365945 0.8452920194275644 0.0723742998744118 0.12767918592807984 1.6919591188689616 0.734723534313932 0.1174768557474255 0.038652978775105575 1.111219166390235e-10 9.954200276462547 -0.16012247593838058 (ac)MEGDGS(ph)DPEPPDAGEDSK ddPTM_A549_MK2206_60min_R1 2 MEGDGSDPEPPDAGEDSK 18 0 K7EQ21;Q9P0U4;Q9P0U4-2;K7EJR0;K7EQZ1;A0A669KB29;A0A669KB50 K7EQ21 CXXC1 CXXC-type zinc finger protein 1 1 MEGDGS(1)DPEPPDAGEDSK;MEGDGS(1)DPEPPDAGEDSK 56.122 0.0016622 1879020.0 430.90999999999997 478.3 155.74 453.76 537.11 341.53 125.53 202.93 675.54 0.0 136.59 True False 503.637073261982 502.6434270155218 177.82627384482905 564.9312203700603 458.10183050531464 377.6704779107341 148.33717611336107 231.69594894706077 522.531268615708 0.0 102.67093330777725 4.905352050830455 4.895674080498954 1.732002117013568 5.502348154141764 4.461845390379964 3.6784556811087823 1.4447825819279334 2.256684939762888 5.089378773340971 0.0 1.0 6.681883994526376 -7.530709270284477 24.5951451135611 2.806372635988535 4.23809969128817 0.2750430322196674 1.5757668173664128 240.30175225663544 754768.8787578528 0.2634272948639794 0.3911505690083848 2.9463933776037925e-08 7.530709270284477 1.431727055299635 (ac)MEGDGS(ph)DPEPPDAGEDSK ddPTM_A549_PD325901_60min_R1 2 MEGDGSDPEPPDAGEDSK 18 0 K7EQ21;Q9P0U4;Q9P0U4-2;K7EJR0;K7EQZ1;A0A669KB29;A0A669KB50 K7EQ21 CXXC1 CXXC-type zinc finger protein 1 1 MEGDGS(1)DPEPPDAGEDSK;MEGDGS(1)DPEPPDAGEDSK 73.624 5.0096e-05 2806200.0 355.8 0.0 383.57000000000005 381.04 418.38 193.66 407.24 315.67999999999995 359.56 297.71000000000004 459.68 True False 391.92055407388386 0.0 409.60136679378536 404.5759753953724 388.9944321326444 192.08289716776832 422.7377410502789 309.38351475383064 344.4489436035813 278.9125397924935 403.1422741516061 0.9721643677747817 0.0 1.016021868844621 1.0035563158112937 0.9649060817332166 0.4764642893678112 1.0486068273041087 0.7674300974883214 0.8544103798800508 0.691846421662059 1.0 8.655145264234074 -3.5922221367786196 0.17197430715273743 0.9966426906850119 8.069111599458787e-20 0.004934080663075102 0.3018372847305517 51.01768064797916 0.8466941177233712 0.36898271792860854 11.936809862096968 0.00025572775334235874 3.5922221367786196 -0.9966426906850119 (ac)MEGGLADGEPDRT(ph)SLLGDSK ddPTM_A549_MK2206_60min_R1 1 MEGGLADGEPDRTSLLGDSK 20 1 F8VQX7;Q9BZF1;F8VZB8;F8W060 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 MEGGLADGEPDRT(0.497)S(0.497)LLGDS(0.006)K 60.768 0.00038689 5581400.0 284.3 481.44 376.17 371.74 364.27 302.62 586.31 565.44 575.94 552.63 348.35 True False 332.2828895323419 505.94323960349766 429.51656242589814 462.81631668804255 310.686365545551 334.6430475371019 692.8349376804324 645.5928515873752 445.4905095871907 427.79049918179646 261.8450810290959 1.2690056587139746 1.9322235789767532 1.6403461189258344 1.767519614533507 1.1865274089721314 1.2780192250390863 2.6459727062943963 2.4655527193792794 1.7013514549761135 1.6337541935120823 1.0 8.032569692627344 (ac)MEGGLADGEPDRT(ph)SLLGDSK ddPTM_A549_PD325901_60min_R1 1 MEGGLADGEPDRTSLLGDSK 20 1 F8VQX7;Q9BZF1;F8VZB8;F8W060 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 MEGGLADGEPDRT(0.561)S(0.439)LLGDSK 80.60300000000001 3.3648e-05 6688300.0 932.45 980.89 896.98 850.09 746.76 785.77 770.64 578.24 973.75 677.94 844.81 True False 1027.1116375665908 1063.5530427337549 957.8544567789179 902.598128605533 694.3101537821447 779.3709496412132 799.967126910389 566.7065495794951 932.8266738068397 635.1347527020357 740.9037256918253 1.3862956845135532 1.4354807593127608 1.2928190580827663 1.218239424781842 0.9371125150353732 1.0519193285382238 1.0797180513074254 0.7648855444077136 1.2590389836895537 0.8572432971759901 1.0 9.533142278202364 -6.278102649120815 2.1650527517781804 1.078606316572961 1.4016947754621785 0.5450352447034359 0.14066823341830742 0.2184238758001731 1.970479398768837 0.020658086845316354 0.06412212840900293 5.271052609761617e-07 6.278102649120815 0.32308845888921756 (ac)MEGGLADGEPDRTS(ph)LLGDSK ddPTM_A549_MK2206_60min_R1 3 MEGGLADGEPDRTSLLGDSK 20 1 F8VQX7;Q9BZF1;F8VZB8;F8W060 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 MEGGLADGEPDRT(0.165)S(0.834)LLGDSK;MEGGLADGEPDRT(0.036)S(0.959)LLGDS(0.005)K;MEGGLADGEPDRT(0.189)S(0.809)LLGDS(0.001)K 80.975 2.5523e-10 23218400.0 4054.2000000000003 4278.1 3616.0 3168.04 4865.1 4242.8 3987.03 4550.1 5022.9 4334.6 4892.1 True False 4738.44984432649 4495.837016757483 4128.803173384499 3944.209942218722 4149.450234758999 4691.770279857294 4711.421742047752 5195.090609096836 3885.221169923082 3355.4108494895586 3677.256554908683 1.2885828806263857 1.2226062961954876 1.1227944288719962 1.0725958016047832 1.128409229217362 1.2758887528786536 1.2812328081266415 1.4127626211345063 1.0565542849428855 0.9124766791184313 1.0 11.844414118691068 -8.970649126109338 24.16267847646337 1.0249502378860615 1.2183582921153187 0.5375970716933773 0.09617613836937927 83.15679409648564 68458.3033065839 0.01703029780830727 0.017894631520903592 1.0699189358189972e-09 8.970649126109338 0.1934080542292571 (ac)MEGGLADGEPDRTS(ph)LLGDSK ddPTM_A549_PD325901_60min_R1 3 MEGGLADGEPDRTSLLGDSK 20 1 F8VQX7;Q9BZF1;F8VZB8;F8W060 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 MEGGLADGEPDRT(0.428)S(0.571)LLGDSK;MEGGLADGEPDRT(0.264)S(0.736)LLGDSK;MEGGLADGEPDRT(0.298)S(0.701)LLGDSK 91.475 5.181899999999999e-15 28068900.0 5947.93 5728.299999999999 6293.41 6376.29 6945.8 5773.379999999999 6500.6 5538.51 6699.9 6325.1 7469.7 True False 6551.759474965361 6211.043944470598 6720.518647948683 6770.138951694724 6457.950969709169 5726.3635074380345 6747.983890264811 5428.040073172958 6418.326502529853 5925.732106551682 6550.974254329644 1.0001198631845023 0.9481099609520858 1.02588079070941 1.0334552829634813 0.985800083925075 0.8741239524263721 1.0300733338716694 0.8285851634335883 0.9797514466322133 0.9045573797874827 1.0 12.677493763429522 -4.844088548261995 16.765694767351967 0.9778751314105427 10.147868722311967 0.0 0.06604918549453033 771.018356574369 82690.73927191223 0.007921993605938309 722.0690602348033 1.4318959203811928e-05 4.844088548261995 9.169993590901425 (ac)MEGIS(ph)NFKTPSK ddPTM_A549_PD325901_60min_R1 3 MEGISNFKTPSK 12 1 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 MEGIS(0.964)NFKT(0.036)PS(0.001)K;MEGIS(0.647)NFKT(0.348)PS(0.005)K;MEGIS(0.715)NFKT(0.279)PS(0.006)K 89.301 4.4633e-23 18477300.0 9536.400000000001 9832.2 9446.6 9985.400000000001 10869.8 9730.599999999999 10192.5 9636.8 11237.3 10648.4 11113.8 True False 10504.528307673369 10660.7940001089 10087.703083020499 10602.175479511207 10106.342746774277 9651.35721977015 10580.381165050014 9444.586464076654 10765.035359763395 9976.058206732692 9746.873056182823 1.0777331608940914 1.093765553183884 1.0349681405383107 1.0877514684348772 1.0368805142448663 0.9902003610940554 1.0855154370086377 0.968986300492093 1.1044604046561077 1.0235137104206449 1.0 13.250723739432487 -5.760270663002472 24.99864032477839 1.0443754664291822 1.0857493668518725 0.15544332728878285 0.04098805840160742 51.57770257449394 1103085.732419819 0.006275890444778379 0.021929945562826424 1.7367181259507308e-06 5.760270663002472 0.04137390042269029 (ac)MEGISNFKT(ph)PSK ddPTM_A549_MK2206_60min_R1 5 MEGISNFKTPSK 12 1 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 MEGIS(0.2)NFKT(0.783)PS(0.017)K;MEGIS(0.181)NFKT(0.787)PS(0.032)K;MEGIS(0.037)NFKT(0.862)PS(0.1)K;MEGIS(0.029)NFKT(0.934)PS(0.037)K;MEGIS(0.083)NFKT(0.905)PS(0.012)K 68.83 9.187e-05 50379200.0 18182.0 20754.1 18811.699999999997 19189.100000000002 24908.500000000004 18612.9 18686.4 20285.199999999997 29191.0 28703.700000000004 28126.9 True False 21250.677092778897 21810.395042071606 21479.481929412923 23890.43036143145 21244.492646090428 20582.504723756912 22081.47699932056 23160.689220819575 22579.28510844824 22219.514234414586 21142.21446705117 1.0051301449948282 1.031604095969311 1.0159523243360984 1.1299871353903443 1.0048376284896103 0.9735264371588638 1.044425929636329 1.0954713025408986 1.0679716234851677 1.0509549162431553 1.0 14.36783887421295 -11.026686612630412 1.3697927629389428 1.000406528814973 1.044265280646794 0.0 0.044677744121372966 0.7465738328051623 2.533019395605672 0.02940656108643261 0.006895360761940277 9.404016606452963e-12 11.026686612630412 0.043858751831820975 (ac)MEGISNFKT(ph)PSK ddPTM_A549_PD325901_60min_R1 2 MEGISNFKTPSK 12 1 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 MEGIS(0.051)NFKT(0.913)PS(0.036)K;MEGIS(0.31)NFKT(0.68)PS(0.01)K 64.65 1.0497e-09 2439900.0 2389.1 2478.9 2752.7 2232.9 3090.6 2537.9 2243.1 3326.2 2693.7 3120.0 3208.5 True False 2631.6396732375356 2687.805602700307 2939.514775329803 2370.8211617161624 2873.5269179911816 2517.232183838063 2328.4623979714183 3259.8563316465784 2580.4931565940783 2923.0026675374684 2813.874840357267 0.9352369321811791 0.9551972831737771 1.0446501504511065 0.8425467713464996 1.0211992647215042 0.8945785888324939 0.8274932362221847 1.1584937200805585 0.9170603893193923 1.0387820473089506 1.0 11.458342444362476 -11.137520996712626 1.4617159656845848 1.0003423975830597 0.9513331697414156 0.05940475567919157 0.09046853055440676 1.3125754290174136 4.964222580290867 0.06309487319045926 0.013109749716593526 7.28582949067708e-12 11.137520996712626 -0.049009227841644076 (ac)MEGISNFKT(ph)PSKLSEK ddPTM_A549_MK2206_60min_R1 4 MEGISNFKTPSKLSEK 16 2 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 MEGISNFKT(0.98)PS(0.019)KLSEK;MEGIS(0.001)NFKT(0.909)PS(0.089)KLSEK;MEGIS(0.019)NFKT(0.797)PS(0.17)KLS(0.015)EK;MEGIS(0.01)NFKT(0.956)PS(0.033)KLSEK 92.492 1.002e-08 47846900.0 16645.3 20188.699999999997 19631.7 19154.1 27388.9 17989.2 17344.5 15898.0 31946.300000000003 28264.700000000004 31015.9 True False 19454.61970148676 21216.21859709024 22415.77025966053 23846.85535986022 23360.029091856446 19892.805203735472 20495.771139155517 18151.590185583053 24710.514057758228 21879.684639313324 23313.796034707437 0.8344681266201571 0.9100284898051558 0.961480928557923 1.0228645444250783 1.0019830771908693 0.8532632426791799 0.8791262953764928 0.7785772063271307 1.0599095068418496 0.9384865770782613 1.0 14.508896307850208 -8.808061052428503 24.99993055455956 1.028290645263402 0.9118035934528183 0.21321829746165855 0.0744847080203009 100.74164234068743 54020.225947891326 0.012960251884013497 0.013797257577202423 1.5557469118018291e-09 8.808061052428503 -0.11648705181058372 (ac)MEGISNFKT(ph)PSKLSEK ddPTM_A549_PD325901_60min_R1 3 MEGISNFKTPSKLSEK 16 2 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 MEGIS(0.004)NFKT(0.96)PS(0.035)KLS(0.001)EK;MEGIS(0.004)NFKT(0.891)PS(0.103)KLS(0.001)EK;MEGIS(0.016)NFKT(0.913)PS(0.071)KLSEK 91.319 8.0127e-08 70237000.0 25839.7 25332.0 29112.5 32626.0 32731.5 39343.0 35195.6 38989.0 35772.4 36987.0 38017.0 True False 28462.927321818242 27466.816542661738 31088.249317684084 34641.23392097788 30432.55235754496 39022.60365213007 36534.987817771325 38211.33380872122 34269.01042987195 34651.6345077591 33341.15000961888 0.8536876296590465 0.823811312289396 0.9324288247020621 1.0389933733834593 0.9127625276502221 1.1704036495703385 1.0957926708356198 1.146071260220397 1.0278292866318464 1.0393053178358318 1.0 15.02501624645808 -6.041528407685839 1.6902399719781558 1.0362478605804446 0.8289012335798934 0.5967116278391749 0.06846738025543306 0.23488445713312042 1.239861399809894 0.010446391686549863 0.04804830165308079 9.08806851052845e-07 6.041528407685839 -0.20734662700055118 (ac)MEGPLT(ph)PPPLQGGGAAAVPEPGAR ddPTM_A549_MK2206_60min_R1 2 MEGPLTPPPLQGGGAAAVPEPGAR 24 0 F8WDE9;C9J029;C9K0R9;P20839-3;P20839-7;P20839-5;P20839-6 F8WDE9 IMPDH1 1 MEGPLT(1)PPPLQGGGAAAVPEPGAR;MEGPLT(1)PPPLQGGGAAAVPEPGAR 86.641 1.3992e-07 7082100.0 895.77 1026.2 1115.07 1016.8299999999999 1598.5700000000002 1140.03 994.3499999999999 1310.1599999999999 1625.74 1653.01 1527.65 True False 1046.9540765261547 1078.4291967454076 1273.2036931819289 1265.9533956472335 1363.422470612875 1260.6672179093318 1175.010523925122 1495.8791921967224 1257.5124857733094 1279.5938929346962 1148.292344004875 0.9117487214751558 0.9391590933927093 1.108780094049398 1.1024661117499002 1.1873478715861634 1.0978625996168618 1.0232677506383632 1.3026989163574634 1.0951152747283062 1.1143450529957237 1.0 10.165274269491986 -5.71560792511439 6.434598353807774 1.081543312504885 0.9220508265607504 0.3999947111056711 0.08155603353332004 0.176039150771822 17.216694566743172 0.012310447667735178 0.047920792431066256 1.924828652707096e-06 5.71560792511439 -0.15949248594413457 (ac)MEGPLT(ph)PPPLQGGGAAAVPEPGAR ddPTM_A549_PD325901_60min_R1 3 MEGPLTPPPLQGGGAAAVPEPGAR 24 0 F8WDE9;C9J029;C9K0R9;P20839-3;P20839-7;P20839-5;P20839-6 F8WDE9 IMPDH1 1 MEGPLT(1)PPPLQGGGAAAVPEPGAR;MEGPLT(1)PPPLQGGGAAAVPEPGAR;MEGPLT(1)PPPLQGGGAAAVPEPGAR 72.797 2.7869e-11 10323000.0 2994.52 3916.8 2909.2 3957.0699999999997 3425.07 3742.4 3378.26 3479.7000000000003 3133.71 4199.4 3936.0 True False 3298.5214659508906 4246.882482010796 3106.635806440756 4201.4892267419855 3184.504899050045 3711.923135188764 3506.821532954806 3410.294653728159 3002.011066470072 3934.2491673259115 3451.896952359732 0.9555677679474199 1.2303039576855295 0.8999793010382439 1.217153722931917 0.9225376490086424 1.0753284893546073 1.0159114195334038 0.9879479894082199 0.8696699547817857 1.1397354039310013 1.0 11.753173681815515 -8.282937635095324 2.4873941559585755 0.9386030073343045 1.052391503667059 0.0 0.12025877855682518 0.3424888369899564 4.179818071061645 0.016620273966856197 0.021072722764331062 5.212695603001673e-09 8.282937635095324 0.11378849633275456 (ac)MEGQS(ph)VEELLAK ddPTM_A549_MK2206_60min_R1 1 MEGQSVEELLAK 12 0 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog 1 MEGQS(1)VEELLAK 55.567 0.0033330999999999994 711020.0 247.08 230.21 339.5 189.56 398.43 207.79 513.16 400.75 315.34 408.43 445.09 True False 288.781063473975 241.92670569358836 387.6462050232406 236.00220850967173 339.82147479702957 229.77819988016108 606.3945295493693 457.55753974540255 243.91599349450428 316.1653793330456 334.56186914092217 0.8631619144629311 0.7231149990726691 1.158668218881688 0.7054067730900447 1.0157208759910772 0.6868033122548561 1.8125034126167778 1.3676320643482323 0.7290609480417609 0.9450131903700966 1.0 8.386129216932042 -5.730531751328897 24.981621867998022 0.9658562110981177 0.7931384319315982 0.03936572035994634 0.32066432044577686 613.4844303887387 495850.7564574487 0.045564714282436525 0.1764338528132704 1.8598085873921554e-06 5.730531751328897 -0.17271777916651954 (ac)MEGQS(ph)VEELLAK ddPTM_A549_PD325901_60min_R1 1 MEGQSVEELLAK 12 0 Q15050 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog 1 MEGQS(1)VEELLAK 67.563 0.00022952 991680.0 522.15 700.63 627.88 638.79 862.5 708.63 637.65 570.3 662.41 575.36 821.92 True False 575.1582836134859 759.6745489611992 670.4917125491618 678.2466075026504 801.9209754634684 702.8591522255277 661.9161196854684 558.9249191083052 634.5712112928255 539.031671408448 720.8290505801601 0.7979121861841848 1.0538900289184714 0.9301674398520922 0.9409257395449903 1.1124981364417004 0.9750705131262825 0.9182705929411757 0.7753917779235643 0.8803352345220966 0.747794044891237 1.0 9.493513345048509 -7.7556659533881875 22.55231325012999 0.9250548434222393 0.9758579107259496 0.08163293468408905 0.10497437386914507 102.55961769653426 400612.2540536599 0.014733493498470833 0.021490142248783515 1.7552300543721656e-08 7.7556659533881875 0.050803067303710314 (ac)MEGSAS(ph)PPEKPR ddPTM_A549_MK2206_60min_R1 3 MEGSASPPEKPR 12 1 Q96NT5-2;Q96NT5 Q96NT5-2 SLC46A1 Proton-coupled folate transporter 1 MEGS(0.124)AS(0.876)PPEKPR;MEGS(0.128)AS(0.872)PPEKPR;MEGS(0.041)AS(0.959)PPEKPR 67.997 4.2217e-05 11389900.0 2485.3500000000004 2590.96 2346.58 2101.39 2512.31 1944.38 1251.12 1668.58 2512.83 3365.8 3585.26 True False 2904.8163190264004 2722.8287971150676 2679.3603292590146 2616.230644334983 2142.7525270369324 2150.133001025015 1478.432309240406 1905.1063248119372 1943.6780171649473 2605.4634423503776 2694.940993857833 1.0778775214919007 1.0103482055157404 0.9942185507458869 0.9707932939154356 0.7951018341108695 0.7978404744020312 0.5485954284750467 0.7069194943985619 0.7212321240408883 0.9667979552385794 1.0 11.396037969958746 -6.639511495310166 3.5950933209225484 0.8187935347476522 1.0212075814269819 0.44023446156436497 0.1188503313372026 0.24274421665136453 6.042561217890595 0.021481496827858076 0.046920478708045284 2.293445924584944e-07 6.639511495310166 0.20241404667932972 (ac)MEGSAS(ph)PPEKPR ddPTM_A549_PD325901_60min_R1 4 MEGSASPPEKPR 12 1 Q96NT5-2;Q96NT5 Q96NT5-2 SLC46A1 Proton-coupled folate transporter 1 MEGS(0.016)AS(0.984)PPEKPR;MEGS(0.028)AS(0.972)PPEKPR;MEGS(0.024)AS(0.976)PPEKPR;MEGS(0.016)AS(0.984)PPEKPR 76.52199999999999 0.000138 24159600.0 8614.66 8829.23 8526.09 8199.119999999999 9015.86 8751.05 9287.2 8683.99 7627.450000000001 9201.48 10627.05 True False 9489.213941422493 9573.300198285377 9104.721738944201 8705.561020847432 8382.61709662848 8679.78435020138 9640.629478150837 8510.781006991638 7306.894801671871 8620.4969824656 9319.990220420346 1.0181570706620886 1.0271792106938076 0.976902499210301 0.934074051040667 0.8994233790355213 0.9313083109447627 1.0344033899336034 0.9131748859933662 0.784002410824667 0.9249469987187178 1.0 13.186112725704897 -5.908988639680445 0.7186683708466517 0.9066053163363986 1.060211100707898 0.2296653665892936 0.06129310058006516 1.8206328273370898 1.070673341764611 0.014475377241921165 0.1884829484819591 1.2331370893333556e-06 5.908988639680445 0.1536057843714994 (ac)MEITIRNS(ph)PYR ddPTM_A549_PD325901_60min_R1 2 MEITIRNSPYR 11 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;Q9UQ88-9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.476)IRNS(0.524)PYR;MEIT(0.004)IRNS(0.996)PYR 58.273999999999994 0.0011173 2821400.0 350.11 415.59 283.9 251.48 448.43 346.51 354.1 309.92 277.64 474.32 451.63 True False 385.6529094626404 450.6132278132319 303.16716122938624 267.0133484474813 416.93382379951686 343.6881374450244 367.5754692709551 303.73840247246346 265.97175631910784 444.3713542520426 396.0823731184515 0.9736684478693222 1.1376755402302958 0.7654144233748108 0.67413590346175 1.052644227807708 0.8677188402480152 0.9280278402114825 0.7668566517642736 0.6715061673283979 1.1219165113392962 1.0 8.62965668808757 -8.231410024526246 23.312979728716986 0.8346920092308818 0.9113632651668466 0.0 0.1640054973015243 868.5943344042997 674323.845816723 0.026961054502658358 0.034802840419083936 5.869349559682261e-09 8.231410024526246 0.0766712559359648 (ac)MENAHTK ddPTM_A549_PD325901_60min_R1 1 MENAHTK 7 0 P16615-4;P16615-5;P16615-2;P16615;P16615-3;J3QSY6 P16615-4 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 0 45.718 0.026654 1452400.0 1557.7 1420.3 960.05 1549.6 1488.2 1112.0 1395.3 1233.5 1191.1 1566.3 1488.5 False True 1715.8365572818673 1539.9936655432841 1025.2047662496377 1645.3152726030573 1383.6739660112848 1102.9442406824244 1448.3989050374564 1208.8968748379693 1141.0422091618248 1467.4035506935704 1305.4239363789281 1.3143902984047995 1.179688546094092 0.7853423992618206 1.2603685490607308 1.0599422359677362 0.8448935322435136 1.1095237835573337 0.9260569238459715 0.8740778971212398 1.124082001103758 1.0 10.350302682714311 -2.0000000000003824 0.5273880954173542 0.9508737357735332 14.685388381403277 0.2595021556111953 0.14224370399713657 80.17507696334982 0.7085232087745313 0.02306658138738395 1242.7494063913816 0.009999999999991196 2.0000000000003824 13.734514645629744 (ac)MENGAVYS(ph)PTTEEDPGPAR ddPTM_A549_MK2206_60min_R1 1 MENGAVYSPTTEEDPGPAR 19 0 Q9NX76 Q9NX76 CMTM6 CKLF-like MARVEL transmembrane domain-containing protein 6 1 MENGAVY(0.321)S(0.559)PT(0.099)T(0.02)EEDPGPAR 41.202 0.0018213 824440.0 0.0 0.0 0.0 143.21 165.31 149.43 0.0 0.0 0.0 0.0 142.04 True False 0.0 0.0 0.0 178.29645642894116 140.99311798483282 165.2425834163939 0.0 0.0 0.0 0.0 106.7675478954292 0.0 0.0 0.0 1.6699499046617532 1.3205615448143944 1.5476854781589309 0.0 0.0 0.0 0.0 1.0 6.738329394806992 (ac)MENGAVYS(ph)PTTEEDPGPAR ddPTM_A549_PD325901_60min_R1 2 MENGAVYSPTTEEDPGPAR 19 0 Q9NX76 Q9NX76 CMTM6 CKLF-like MARVEL transmembrane domain-containing protein 6 1 MENGAVY(0.005)S(0.934)PT(0.056)T(0.006)EEDPGPAR;MENGAVY(0.042)S(0.703)PT(0.127)T(0.127)EEDPGPAR 73.464 5.977e-05 1981630.0 0.0 0.0 143.43 160.74 0.0 0.0 0.0 128.54 141.59 0.0 156.29 True False 0.0 0.0 153.16402231465614 170.66854473297334 0.0 0.0 0.0 125.97616886232076 135.63946469248836 0.0 137.06732080393863 0.0 0.0 1.1174364641863999 1.2451439462882474 0.0 0.0 0.0 0.9190824488538543 0.9895828115478184 0.0 1.0 7.098740838690027 -8.385438053702865 6.781210081167449 0.992724316912271 0.3644219427790478 0.033442382053064046 0.5216633765542145 0.23834065293435522 12.290909305570976 0.07490168554645753 0.09057549146661303 4.1168206405336115e-09 8.385438053702865 -0.6283023741332232 (ac)MEPAPARS(ph)PR ddPTM_A549_MK2206_60min_R1 1 MEPAPARSPR 10 1 H3BT57;P29590-12;P29590-13;P29590-11;P29590-14;P29590-10;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590 H3BT57;P29590-2 PML Protein PML 1 MEPAPARS(1)PR 52.247 0.0019510000000000003 2801700.0 175.81 123.69 100.57 175.24 211.78 0.0 0.0 110.88 128.38 231.54 153.74 True False 205.48242985818155 129.9852926772944 114.8323382597564 218.17380786682256 180.62744254326955 0.0 0.0 126.59757955575857 99.30213498073334 179.23495318848612 115.56211499185643 1.7781124019118353 1.1248088760443193 0.993684982901607 1.8879354006474967 1.563033374354547 0.0 0.0 1.0954937919289536 0.8592966214553194 1.5509836697010664 1.0 6.852524702911911 (ac)MEPAPARS(ph)PR ddPTM_A549_PD325901_60min_R1 2 MEPAPARSPR 10 1 H3BT57;P29590-12;P29590-13;P29590-11;P29590-14;P29590-10;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590 H3BT57;P29590-2 PML Protein PML 1 MEPAPARS(1)PR;MEPAPARS(1)PR 88.596 6.1942e-05 9348100.0 388.46000000000004 370.76 304.66 133.17 211.4 444.66 341.27 393.62 101.29 289.23 320.03 True False 427.8961732308627 402.0052463823334 325.3360596694077 141.39560844898628 196.55199329040838 441.03883638655316 354.2572166001096 385.7689403110835 97.03313354546327 270.96796843969935 280.6683388373182 1.5245616053575646 1.4323141970614108 1.1591477008668938 0.5037818267451336 0.7002998418155545 1.5713879171892966 1.2621915890749802 1.3744654702028363 0.34572169396600844 0.9654383161356814 1.0 8.132722517684147 -8.75069946224805 24.99663403358977 0.6910352302929621 1.1737857852624174 0.21156526919619634 0.35153724971854416 229.4139944952429 533949.4575338925 0.06800545849834955 0.07673040400436297 1.7754176693142725e-09 8.75069946224805 0.4827505549694553 (ac)MEPSSWS(ph)GSESPAENMER ddPTM_A549_PD325901_60min_R1 1 MEPSSWSGSESPAENMER 18 0 P28347 P28347 TEAD1 Transcriptional enhancer factor TEF-1 1 MEPS(0.023)S(0.023)WS(0.448)GS(0.448)ES(0.059)PAENMER 43.408 0.020054 338790.0 230.18 194.85 261.16 316.09 255.67 183.35 222.26 169.3 143.82 158.13 267.59 True False 253.54770415043998 211.27069332613448 278.8838880826577 335.6141614075247 237.71262121361735 181.8568583894987 230.71822592533877 165.9231786867193 137.77574554752223 148.14564481336535 234.67812639276949 1.0804062059285806 0.9002572867508789 1.188367626627047 1.4301041454789163 1.0129304544377058 0.7749203608568684 0.9831262481582829 0.7070244732098366 0.5870838823595071 0.6312716361363016 1.0 7.874539568852281 -7.09735245952596 4.436653430784503 0.8060103183925197 1.143598556261062 0.5152338839973473 0.16730757767673965 0.18216285367814844 6.1154289474674215 0.029213676377517813 0.05201569003036757 7.991853984113361e-08 7.09735245952596 0.3375882378685423 (ac)MEPSSWSGS(ph)ESPAENMER ddPTM_A549_PD325901_60min_R1 1 MEPSSWSGSESPAENMER 18 0 P28347 P28347 TEAD1 Transcriptional enhancer factor TEF-1 1 MEPSSWS(0.008)GS(0.588)ES(0.403)PAENMER 52.026 0.026411 1077300.0 248.17 0.0 508.84 244.25 330.75 288.88 224.4 525.54 248.74 396.97 527.64 True False 273.364035706902 0.0 543.3729423034903 259.33676776800246 307.5192610255563 286.52745705785867 232.93966479639172 515.0576924218456 238.2863228166505 371.90524645267595 462.74362498554115 0.5907461949701489 0.0 1.1742418759857978 0.5604329347078648 0.6645564507456262 0.61919266217187 0.5033881661874221 1.1130519462865405 0.514942421571115 0.8036960994639234 1.0 8.854069304635354 -14.999999999941945 0.2773810824668047 3.793386765126142 0.5933225255334801 0.09733519688135117 0.2999201380317992 56.08615831505184 0.7372916320858185 87.24415188199966 0.11830230423542759 1.0000000001336763e-15 14.999999999941945 -3.200064239592662 (ac)MEPSSWSGSES(ph)PAENMER ddPTM_A549_MK2206_60min_R1 3 MEPSSWSGSESPAENMER 18 0 P28347 P28347 TEAD1 Transcriptional enhancer factor TEF-1 1 MEPS(0.028)S(0.028)WS(0.05)GS(0.166)ES(0.727)PAENMER;MEPS(0.002)S(0.002)WS(0.004)GS(0.033)ES(0.96)PAENMER;MEPS(0.021)S(0.021)WS(0.024)GS(0.052)ES(0.881)PAENMER 47.754 0.00047737 6436600.0 569.13 1142.78 647.88 911.9399999999999 1097.21 619.55 1010.6500000000001 794.6099999999999 1176.63 1178.4 1641.67 True False 665.185230107428 1200.9426207919676 739.7591260985481 1135.3653409385417 935.8118624652984 685.1103697759937 1194.2720229345039 907.248400891065 910.1251836920102 912.1986215656561 1233.9980312129633 0.5390488584925711 0.9732127527071467 0.5994816096840924 0.9200706259008613 0.7583576624878716 0.5551956749092717 0.9678070732095005 0.735210574038989 0.7375418442097504 0.7392221044866716 1.0 10.269124377397748 -10.789261532310556 0.6929245801829103 1.0286769205468858 0.7572036047619062 0.0 0.16436403467580232 0.9373170318151595 0.6601088930477101 0.15314189825506766 0.025825952209969257 1.6245701443298322e-11 10.789261532310556 -0.2714733157849796 (ac)MEPSSWSGSES(ph)PAENMER ddPTM_A549_PD325901_60min_R1 5 MEPSSWSGSESPAENMER 18 0 P28347 P28347 TEAD1 Transcriptional enhancer factor TEF-1 1 MEPSSWS(0.001)GS(0.068)ES(0.931)PAENMER;MEPSSWS(0.002)GS(0.019)ES(0.978)PAENMER;MEPS(0.064)S(0.064)WS(0.064)GS(0.064)ES(0.745)PAENMER;MEPS(0.005)S(0.005)WS(0.003)GS(0.06)ES(0.926)PAENMER;MEPS(0.001)S(0.001)WS(0.001)GS(0.025)ES(0.972)PAENMER 72.819 7.668e-06 12709700.0 1146.6100000000001 1666.52 2092.02 1670.6599999999999 1505.3899999999999 1536.5900000000001 1562.99 1873.64 1814.21 1748.23 2695.37 True False 1263.013003110331 1806.9634890524478 2233.9970575382185 1773.8528738558489 1399.6565997135667 1524.0765204947913 1622.4704397509456 1836.2687803578547 1737.96506278522 1637.8464594452016 2363.856577358193 0.5343018756754919 0.7644133347006526 0.9450645521120814 0.750406302500077 0.5921072425120646 0.6447415359683428 0.686365854549514 0.7768105721583322 0.7352244122727365 0.692870487631543 1.0 11.20692678996981 -10.521728309308891 0.6022049301454513 1.02651127387805 0.7127666767733568 0.0 0.13560382346201305 0.6720354520462379 0.3867209356924008 0.11096217076966439 0.023323022342841726 3.0079574650715685e-11 10.521728309308891 -0.31374459710469316 (ac)MEQLS(ph)DEEIDHGAEEDS(ph)DKEDQDLDK ddPTM_A549_MK2206_60min_R1 1 MEQLSDEEIDHGAEEDSDKEDQDLDK 26 1 C9K0J5;Q70E73;C9J0R8;C9JLG4;C9J164;Q70E73-5;Q70E73-2;Q70E73-8;Q70E73-7;Q70E73-4;Q70E73-3;Q70E73-9;Q70E73-6 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 2 MEQLS(1)DEEIDHGAEEDS(1)DKEDQDLDK 47.718999999999994 0.00080564 2582900.0 838.72 754.78 678.31 847.89 863.81 1112.7 1076.9 675.1 1434.9 1178.1 1002.3 True False 980.2754312647412 793.1950780739609 774.5045576710289 1055.6230880632286 736.7446932821875 1230.4451754495171 1272.558790380614 770.7974924070402 1109.8974410644507 911.9663917740157 753.401247927265 1.3011332725578113 1.0528189066001357 1.02801071779722 1.4011432698942659 0.9778915223582354 1.6331870684242709 1.6890850577718577 1.023090278291462 1.4731823767454162 1.2104657302904533 1.0 9.55727461272951 -6.251399279940409 24.680536541509092 1.2681022921343434 1.119870771817146 0.08229531135717794 0.24036250218683422 1498.0502265730909 3682488.754722347 0.03697411027086484 0.09652760507290674 5.605323990076331e-07 6.251399279940409 -0.14823152031719755 (ac)MEQLS(ph)DEEIDHGAEEDS(ph)DKEDQDLDK ddPTM_A549_PD325901_60min_R1 3 MEQLSDEEIDHGAEEDSDKEDQDLDK 26 1 C9K0J5;Q70E73;C9J0R8;C9JLG4;C9J164;Q70E73-5;Q70E73-2;Q70E73-8;Q70E73-7;Q70E73-4;Q70E73-3;Q70E73-9;Q70E73-6 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 2 MEQLS(1)DEEIDHGAEEDS(1)DKEDQDLDK;MEQLS(1)DEEIDHGAEEDS(1)DKEDQDLDK;MEQLS(1)DEEIDHGAEEDS(1)DKEDQDLDK 169.65 4.488799999999999e-69 76655000.0 3497.4 3558.52 3720.8900000000003 3836.4 4121.0 3524.23 3555.9500000000003 3325.64 4678.79 4100.1 4269.86 True False 3852.453473350201 3858.408969027026 3973.4119709292418 4073.365714903442 3831.555176678209 3495.5298393347343 3691.2736231405047 3259.307501285889 4482.156727230507 3841.218986272558 3744.6942888726444 1.0287764971356308 1.0303668794785958 1.061077798189356 1.0877698953977217 1.0231957220282766 0.933462005088559 0.9857343052299679 0.8703801298201881 1.1969352853580684 1.0257763891933012 1.0 11.870632228731926 -8.774781526200437 24.999918811808254 1.0929971977566197 1.006129857887997 0.1450948127805577 0.07334278130472065 309.33564269715316 579617.5536788865 0.01559984297211044 0.016654367459361864 1.6796487605200622e-09 8.774781526200437 -0.08686733986862283 (ac)MERS(ph)PPQSPGPGK ddPTM_A549_MK2206_60min_R1 1 MERSPPQSPGPGK 13 1 Q86VQ6 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 MERS(0.998)PPQS(0.002)PGPGK 43.308 0.0047339 5478700.0 618.59 442.69 422.6 595.55 637.15 430.14 657.95 494.86 769.8 741.57 876.83 True False 722.9928689265265 465.2210301181294 482.53103458857584 741.4597767352551 543.4260790275014 475.65712929617655 777.4909983572521 565.0079204451906 595.4415291179973 574.0488219572671 659.088911723101 1.0969580220009423 0.705854736505687 0.7321182711556505 1.1249768635870483 0.8245110323685853 0.7216888660023634 1.1796450896505064 0.8572559944424675 0.9034312647762409 0.8709732658929009 1.0 9.364329289074158 -7.7223022699570425 24.999986874989386 0.9597670334904098 0.863899476857973 0.08596581607186626 0.15318714752560156 311.4277953702139 198933.0824920468 0.022016067288411795 0.03265479670670168 1.8953862688267905e-08 7.7223022699570425 -0.09586755663243685 (ac)MERS(ph)PPQSPGPGK ddPTM_A549_PD325901_60min_R1 2 MERSPPQSPGPGK 13 1 Q86VQ6 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 MERS(0.998)PPQS(0.002)PGPGK;MERS(0.998)PPQS(0.002)PGPGK 51.276 0.00074657 14435600.0 4286.3 3972.3999999999996 4038.1 4223.1 5115.200000000001 4636.0 4266.9 4821.0 5377.7 4877.3 5151.8 True False 4721.4420205927145 4307.168089139013 4312.149749067926 4483.951295644019 4755.925998482014 4598.245953060901 4429.2792144372725 4724.841372998665 5151.693970455503 4569.346445634774 4518.161259950933 1.0449919223653361 0.953301097797866 0.9544036834831247 0.9924283436693261 1.0526242258413023 1.0177250630294763 0.9803278279813711 1.0457442975485955 1.1402191453678772 1.0113287646763625 1.0 12.141520048261535 -8.427259494448464 5.425018583572288 1.0674591222150063 0.9987446089570408 0.19233205965718192 0.04558779637057797 0.25512327650923033 11.542100278123433 0.009548148538679186 0.011530438355097983 3.738871209528485e-09 8.427259494448464 -0.06871451325796551 (ac)MES(ph)GDEAAIER ddPTM_A549_MK2206_60min_R1 1 MESGDEAAIER 11 0 E9PN81;Q8TDP1 E9PN81 RNASEH2C Ribonuclease H2 subunit C 1 MES(1)GDEAAIER 66.262 0.00095999 723410.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MES(ph)GDEAAIER ddPTM_A549_PD325901_60min_R1 2 MESGDEAAIER 11 0 E9PN81;Q8TDP1 E9PN81 RNASEH2C Ribonuclease H2 subunit C 1 MES(1)GDEAAIER;MES(1)GDEAAIER 85.288 8.1079e-05 2401600.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MES(ph)PTKEIEEFESNSLK ddPTM_A549_MK2206_60min_R1 1 MESPTKEIEEFESNSLK 17 1 Q14123-2;Q14123;F8W905 Q14123-2 PDE1C Calcium/calmodulin-dependent 3,5-cyclic nucleotide phosphodiesterase 1C 1 MES(0.946)PT(0.054)KEIEEFESNSLK 128.9 2.3536e-17 4091500.0 4528.5 5129.4 4438.7 4170.4 7107.6 5032.1 4576.1 5243.3 8267.3 7043.8 6996.0 True False 5292.800088804819 5390.464550561191 5068.174404231683 5192.148187216372 6062.081455380786 5564.593481962357 5407.518136002162 5986.553831932802 6394.7697501652665 5452.60068786844 5258.700120222636 1.0064844862423414 1.0250564640170006 0.9637694274943964 0.9873444137363273 1.152771847945598 1.0581690065503813 1.028299391936657 1.1384094348546634 1.2160362074220223 1.0368723378806388 1.0 12.360490513482398 -6.745966168966906 24.786470871607634 1.1008938191642086 0.9954849815304179 0.34900820408065103 0.06090067296240109 233.4120845178514 373899.31615621835 0.011827569021184394 0.024549206112207605 1.7948734399322408e-07 6.745966168966906 -0.10540883763379072 (ac)MES(ph)PTKEIEEFESNSLK ddPTM_A549_PD325901_60min_R1 4 MESPTKEIEEFESNSLK 17 1 Q14123-2;Q14123;F8W905 Q14123-2 PDE1C Calcium/calmodulin-dependent 3,5-cyclic nucleotide phosphodiesterase 1C 1 MES(0.5)PT(0.5)KEIEEFESNSLK;MES(0.989)PT(0.011)KEIEEFESNSLK;MES(0.99)PT(0.01)KEIEEFESNSLK;MES(0.876)PT(0.124)KEIEEFESNSLK 147.1 3.9283e-40 72561500.0 54566.7 57787.200000000004 58583.4 57826.1 67731.2 59454.700000000004 62643.5 64993.4 59345.6 64062.4 67344.59999999999 True False 60106.271214118555 62657.130148196025 62559.221814602395 61397.88686439831 62973.99417195503 58970.520635342946 65027.432672338495 63697.05565066405 56851.51081188314 60017.48913104246 59061.64113259274 1.0176871157233953 1.0608768897486518 1.0592191584070214 1.0395560585009942 1.0662418612882616 0.9984571966592457 1.1010095795738661 1.0784843500651269 0.962579259933738 1.016183905156036 1.0 15.84993382442223 -8.764265571864405 24.999956834604497 0.9823290928423384 1.052998580455352 0.4402458085248747 0.02935916130627433 38.719397824450624 342502.01318688545 0.004851920098750091 0.005276118482577311 1.7208159710927195e-09 8.764265571864405 0.07066948761301373 (ac)MES(ph)QEPTESSQNGK ddPTM_A549_MK2206_60min_R1 1 MESQEPTESSQNGK 14 0 C9JYY9;A6NCQ0;A6NJU6;Q9UKK9;A6NFX8 C9JYY9 NUDT5 ADP-sugar pyrophosphatase 1 MES(0.961)QEPT(0.035)ES(0.004)S(0.001)QNGK 79.97399999999999 1.6526e-05 1063300.0 117.79 152.74 213.3 113.71 224.69 328.57 283.5 271.77 271.09 294.01 319.06 True False 137.67007231099032 160.5138135947122 243.54914736806248 141.56895510463585 191.63839864504322 363.33905931288564 335.00828031656044 310.2942297607191 209.68854784177435 227.59293680118697 239.82859639197173 0.5740352667785484 0.6692855481352656 1.0155133751023167 0.5902922221721132 0.7990640045769718 1.5149947286479988 1.3968654503945337 1.2938166441735728 0.8743267108108451 0.9489816486655035 1.0 7.905859881108922 -7.021483588506723 24.810896046616673 1.0471930446331252 0.7263458387842995 0.43744293218269115 0.22808903278913054 745.4280508201061 860877.3188980927 0.03839455191267522 0.06693194314211276 9.51735812444571e-08 7.021483588506723 -0.32084720584882576 (ac)MES(ph)QEPTESSQNGK ddPTM_A549_PD325901_60min_R1 2 MESQEPTESSQNGK 14 0 C9JYY9;A6NCQ0;A6NJU6;Q9UKK9;A6NFX8 C9JYY9 NUDT5 ADP-sugar pyrophosphatase 1 MES(0.978)QEPT(0.02)ES(0.002)SQNGK;MES(1)QEPTESSQNGK 100.48 5.4443e-06 3726500.0 654.23 703.73 688.66 628.81 830.38 619.51 522.72 602.9200000000001 697.88 471.43999999999994 637.28 True False 720.646947981329 763.03579684065 735.3966088489926 667.6501655688749 772.0569734554837 614.4649159578861 542.6123956433592 590.8942876184101 668.5505305430737 441.6731979435461 558.8986000507649 1.2894055342344255 1.365249075183483 1.3157961189779261 1.1945819250723333 1.3813900650052755 1.0994211041181245 0.9708601803512722 1.0572477504233129 1.1961928880880164 0.7902564041195107 1.0 9.126442751065737 -7.310989921463726 8.122670789187081 1.0819248897219318 1.3062802610022586 0.5953705344395804 0.11282816683320315 0.1702708731671093 26.028259192435378 0.013253151441069847 0.021257431776028613 4.886636994769592e-08 7.310989921463726 0.2243553712803268 (ac)MESQEPTES(ph)SQNGK ddPTM_A549_PD325901_60min_R1 1 MESQEPTESSQNGK 14 0 C9JYY9;A6NCQ0;A6NJU6;Q9UKK9;A6NFX8 C9JYY9 NUDT5 ADP-sugar pyrophosphatase 1 MES(0.062)QEPT(0.058)ES(0.502)S(0.378)QNGK 44.61600000000001 0.00046048 1343100.0 0.0 210.18 198.95 242.2 254.84 0.0 0.0 0.0 0.0 139.01 145.19 True False 0.0 227.89260622677415 212.4519433835378 257.16014392389025 236.94091755027284 0.0 0.0 0.0 0.0 130.232884876405 127.33255043524123 0.0 1.7897435137190292 1.6684810180691902 2.019594699429795 1.8608039872002424 0.0 0.0 0.0 0.0 1.0227776356575753 1.0 6.992457457000452 -7.259519042307424 24.989420603950744 0.39583333014213434 1.5274271747207377 0.4531847706687273 0.6149591194096372 131.50950284273577 1711333.750040958 0.0963707006408941 0.16164366580354841 5.5014979782048933e-08 7.259519042307424 1.1315938445786033 (ac)MET(ph)MASPGKDNYR ddPTM_A549_MK2206_60min_R1 1 METMASPGKDNYR 13 1 S4R3E5;O60684 S4R3E5 KPNA6 Importin subunit alpha-7 1 MET(0.876)MAS(0.124)PGKDNYR 84.17 2.0985e-05 54077000.0 2230.8 2531.4 2572.0 2411.6 3911.8 2621.1 2415.8 2437.7 3866.7 3943.2 3835.6 True False 2607.3045021763933 2660.2374475163974 2936.7482748741513 3002.4421082608383 3336.379401930126 2898.4630622546338 2854.719589378297 2783.2514401431513 2990.898623851079 3052.428381328662 2883.114662825321 0.9043360417796751 0.922695681103951 1.018602663550076 1.0413883800648365 1.157213566615705 1.0053235480458735 0.9901512507243821 0.9653627294225238 1.0373845558123362 1.0587259746157378 1.0 11.493412499295786 -5.740097979781337 4.508275909417739 1.023000140470826 0.9093585813011308 0.46719039606293655 0.04778593150144804 0.13242893467384875 6.312426471610527 0.006649940823060675 0.026120420707480555 1.8192903680580394e-06 5.740097979781337 -0.1136415591696952 (ac)MET(ph)PGASASSLLLPAASRPPR ddPTM_A549_MK2206_60min_R1 3 METPGASASSLLLPAASRPPR 21 1 Q96DF8;F8WEF8 Q96DF8 DGCR14 Protein DGCR14 1 MET(0.973)PGAS(0.02)AS(0.004)S(0.004)LLLPAASRPPR;MET(0.77)PGAS(0.077)AS(0.077)S(0.077)LLLPAASRPPR;MET(0.864)PGAS(0.094)AS(0.021)S(0.021)LLLPAASRPPR 64.507 0.000202 7935100.0 3836.58 3731.51 3334.46 3964.6800000000003 5529.21 4115.610000000001 3852.31 3640.52 5845.32 6516.1 6205.030000000001 True False 4484.100908624666 3921.4279204321374 3807.3365678992477 4936.02677798125 4715.870533500196 4551.121118479184 4552.2248618916765 4156.574858624913 4521.364353057953 5044.108484372007 4664.149800884087 0.9613972749706081 0.8407594283718831 0.8162980887058063 1.0582907901126222 1.011088994741615 0.9757664982407985 0.9760031423151985 0.8911752486674069 0.969386607651609 1.0814636535507285 1.0 12.187398409718933 -6.254564589054561 24.99993831697177 0.9828565509672029 0.8696123810713658 0.45788043065051864 0.05822228129497201 340.3431785651089 1237642.3799399817 0.006895796743572778 0.017811397829101946 5.56461870096267e-07 6.254564589054561 -0.11324416989583708 (ac)MET(ph)PGASASSLLLPAASRPPR ddPTM_A549_PD325901_60min_R1 3 METPGASASSLLLPAASRPPR 21 1 Q96DF8;F8WEF8 Q96DF8 DGCR14 Protein DGCR14 1 MET(0.998)PGAS(0.002)ASSLLLPAASRPPR;MET(0.958)PGAS(0.014)AS(0.014)S(0.014)LLLPAASRPPR;MET(0.996)PGAS(0.002)AS(0.001)S(0.001)LLLPAASRPPR 91.45700000000001 5.959400000000001e-18 22699000.0 4659.03 4582.99 4441.599999999999 5974.33 4436.74 4127.030000000001 4389.68 4775.99 3848.63 6336.9 4428.43 True False 5132.011295803393 4969.214651304804 4743.03368551054 6343.350795412121 4125.1186883220735 4093.420835992435 4556.731674525067 4680.729132758328 3686.8854650713406 5936.787052537878 3883.761184130692 1.321402386113012 1.2794851216932048 1.2212475125635667 1.6333009406787105 1.0621453000708654 1.0539836622082805 1.1732780308800081 1.2052051892078484 0.9493079749950128 1.528617948187954 1.0 11.923238775567723 -7.644227694929823 0.6569327597903949 0.9769772416031618 1.3406734124622224 0.0 0.21644833334266497 0.4292692148627397 0.3725542905147687 0.03009969394519766 0.06397891576133248 2.26867510327317e-08 7.644227694929823 0.3636961708590606 (ac)MET(ph)PSQR ddPTM_A549_MK2206_60min_R1 1 METPSQR 7 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 MET(0.997)PS(0.003)QR 49.418 0.016801 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MET(ph)PSQR ddPTM_A549_PD325901_60min_R1 1 METPSQR 7 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 MET(0.998)PS(0.002)QR 59.245 0.0080076 4273400.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MET(ph)PSQRR ddPTM_A549_MK2206_60min_R1 5 METPSQRR 8 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 MET(1)PSQRR;MET(0.55)PS(0.45)QRR;MET(0.5)PS(0.5)QRR;MET(0.985)PS(0.015)QRR;MET(0.977)PS(0.023)QRR 88.948 0.00044830000000000005 52887900.0 349.15999999999997 140.66 161.84 0.0 269.4 0.0 107.6 0.0 0.0 166.78 637.3199999999999 True False 408.08967185758866 147.81899319256388 184.79134556984164 0.0 229.771616872022 0.0 127.14952720304028 0.0 0.0 129.10428216625948 479.05585486281996 0.8518624033401015 0.30856317001885425 0.3857407099695245 0.0 0.479634294288749 0.0 0.2654169151934281 0.0 0.0 0.26949734745070414 1.0 8.904050064600002 -10.857858531047334 1.102466864364738 1.0004404227737134 0.22859883950545667 0.012185298259506205 0.3269264091065321 0.29617067731747837 0.6384970794044883 0.17497297232356693 0.04248478632429187 1.3872076302626254e-11 10.857858531047334 -0.7718415832682567 (ac)MET(ph)PSQRR ddPTM_A549_PD325901_60min_R1 5 METPSQRR 8 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 MET(0.695)PS(0.305)QRR;MET(0.648)PS(0.352)QRR;MET(0.601)PS(0.399)QRR;MET(0.981)PS(0.019)QRR;MET(0.573)PS(0.427)QRR 68.22399999999999 0.0010884 127875500.0 358.59 236.36 125.66 167.29 352.45000000000005 346.97 256.15999999999997 118.17 324.62 523.48 540.51 True False 394.99379281999416 256.27888670549214 134.1880432549654 177.623123356844 327.695127886492 344.14439135753696 265.9083089761304 115.81300664742832 310.97735029645844 490.4273834623444 474.0306965751926 0.8332662751036392 0.5406377446799802 0.28307880528509183 0.3747080613980211 0.6912951634863412 0.7259960037270443 0.5609516659939574 0.24431541561371778 0.6560278744461646 1.0345899263604985 1.0 8.888836675824155 -9.98484451690457 0.7821316767597699 0.976675837889422 0.5316675914791018 0.5032757380924036 0.1781178299556819 0.38359479073770664 0.47536590281406893 0.08450223764320289 0.03831175554685143 1.03551282743838e-10 9.98484451690457 -0.4450082464103202 (ac)METMAS(ph)PGKDNYR ddPTM_A549_MK2206_60min_R1 7 METMASPGKDNYR 13 1 S4R3E5;O60684 S4R3E5 KPNA6 Importin subunit alpha-7 1 MET(0.197)MAS(0.803)PGKDNYR;MET(0.109)MAS(0.891)PGKDNYR;MET(0.004)MAS(0.996)PGKDNYR;MET(0.001)MAS(0.999)PGKDNYR;MET(0.002)MAS(0.998)PGKDNYR;METMAS(1)PGKDNYR;METMAS(1)PGKDNYR 122.34 1.199e-37 180377000.0 18919.699999999997 20928.8 17376.149999999998 16545.19 26127.699999999997 19865.95 17844.48 18079.299999999996 27858.79 28966.109999999997 29893.220000000005 True False 22112.882817745514 21993.986525867578 19840.349353209353 20598.762292741798 22284.349941154895 21968.15164304966 21086.591033309553 20642.09614053415 21548.818546346025 22422.64563316291 22469.908463099146 0.9841109434896029 0.9788195871819797 0.8829741957245556 0.9167265779729273 0.99174191019741 0.9776698324840313 0.9384368907393937 0.9186551059802184 0.9590078473944046 0.9978966167123532 1.0 14.455706626893175 -10.127575888480756 0.7880566962175602 0.9980016301022137 0.9485622303181418 0.2533745006408378 0.03217777561685059 0.6609098427199628 0.8084924097540158 0.016998270488330098 0.006850821701009405 7.454595992710049e-11 10.127575888480756 -0.04943939978407186 (ac)METMAS(ph)PGKDNYR ddPTM_A549_PD325901_60min_R1 9 METMASPGKDNYR 13 1 S4R3E5;O60684 S4R3E5 KPNA6 Importin subunit alpha-7 1 MET(0.076)MAS(0.924)PGKDNYR;MET(0.34)MAS(0.66)PGKDNYR;MET(0.022)MAS(0.978)PGKDNYR;MET(0.06)MAS(0.94)PGKDNYR;MET(0.224)MAS(0.776)PGKDNYR;MET(0.004)MAS(0.996)PGKDNYR;MET(0.085)MAS(0.915)PGKDNYR;MET(0.01)MAS(0.99)PGKDNYR;MET(0.009)MAS(0.991)PGKDNYR 103.14 5.393e-09 425205000.0 45218.24 48247.0 48253.5 47888.24 53797.96 55278.3 50709.95 51000.92 51584.020000000004 53376.83 58392.270000000004 True False 49808.76243689112 52312.94401286121 51528.27268186754 50846.18782271597 50019.37688248657 54828.131852261955 52639.744896799384 49983.66664115223 49416.12302766164 50006.60784445319 51210.390969097185 0.9726299974344684 1.0215298696787798 1.0062073674259229 0.9928881006473668 0.9767427261524066 1.0706446643875047 1.0279114043195792 0.9760454020223118 0.9649628150170091 0.9764933814824727 1.0 15.644148953028456 -8.276271625311287 24.211060769495397 0.9824366712475625 1.0105259665551143 0.23258930446789128 0.02634514160369745 688.8859205550427 1124483.2502620816 0.0045921784238278215 0.005564838912517989 5.293322745534745e-09 8.276271625311287 0.028089295307551776 (ac)MEVAEPS(ph)SPTEEEEEEEEHSAEPR ddPTM_A549_PD325901_60min_R1 1 MEVAEPSSPTEEEEEEEEHSAEPR 24 0 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 MEVAEPS(0.469)S(0.469)PT(0.062)EEEEEEEEHSAEPR 41.482 0.00039599 1212800.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MEVAEPSS(ph)PTEEEEEEEEHSAEPRPR ddPTM_A549_MK2206_60min_R1 1 MEVAEPSSPTEEEEEEEEHSAEPRPR 26 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 MEVAEPS(0.01)S(0.55)PT(0.44)EEEEEEEEHSAEPRPR 200.0 1.7250999999999994e-95 213670000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MEVAEPSS(ph)PTEEEEEEEEHSAEPRPR ddPTM_A549_PD325901_60min_R1 2 MEVAEPSSPTEEEEEEEEHSAEPRPR 26 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 MEVAEPS(0.01)S(0.609)PT(0.381)EEEEEEEEHSAEPRPR;MEVAEPS(0.012)S(0.594)PT(0.394)EEEEEEEEHSAEPRPR 216.81 1.1303999999999997e-111 585610000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 157.55 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 154.40754165441604 0.0 0.0 0.0 0.0 (ac)MEVAEPSSPT(ph)EEEEEEEEHSAEPRPR ddPTM_A549_MK2206_60min_R1 1 MEVAEPSSPTEEEEEEEEHSAEPRPR 26 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 MEVAEPS(0.014)S(0.439)PT(0.547)EEEEEEEEHSAEPRPR 120.18 2.3161999999999996e-32 181860000.0 165.63 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 193.58429473528597 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MEVKPPPGRPQPDS(ph)GR ddPTM_A549_MK2206_60min_R1 4 MEVKPPPGRPQPDSGR 16 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR 66.325 7.1497e-09 152774000.0 13378.5 14548.8 12218.300000000001 11622.3 16875.5 12941.5 12263.2 13540.2 17940.1 19242.8 22599.5 True False 15636.463727078555 15289.271777050857 13951.03866520018 14469.764021744872 14393.13630483968 14310.960940127557 14491.26470256806 15459.5648151234 13876.695994452824 14895.838115294991 16987.420435530512 0.9204731104655345 0.9000349308522532 0.8212570424183119 0.8517928944338267 0.8472820437607652 0.8424446192074618 0.8530585769372289 0.9100595863741924 0.8168807057620494 0.8768746362537296 1.0 14.0521791733657 -10.885977214841711 1.0295144576114648 1.003530444345501 0.8588309244153042 0.10632118568099158 0.04824181984792489 0.2475689113788779 0.44670415927234264 0.02706603876999853 0.005880019856714884 1.3002377929151481e-11 10.885977214841711 -0.14469951993019692 (ac)MEVKPPPGRPQPDS(ph)GR ddPTM_A549_PD325901_60min_R1 3 MEVKPPPGRPQPDSGR 16 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR 74.36399999999999 5.7261e-08 308542000.0 14974.699999999999 15525.8 13893.2 15231.5 16363.199999999999 15965.2 16590.6 17074.3 17313.9 15376.7 18058.0 True False 16494.920520208496 16834.213653799845 14836.076098598489 16172.315161753651 15213.905281975449 15835.184704445184 17221.96436172466 16733.73969197077 16586.256993709114 14405.812537795955 15836.980479093498 1.0415445382396946 1.062968643298058 0.9367995444702159 1.0211741552060907 0.9606569448045621 0.9998866087730117 1.0874525219286268 1.0566243807688651 1.047311829146013 0.9096312618944731 1.0 13.951009673104712 (ac)MEVKPPPGRPQPDS(ph)GRR ddPTM_A549_MK2206_60min_R1 6 MEVKPPPGRPQPDSGRR 17 3 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR 64.203 7.330100000000001e-05 262915000.0 12096.3 11243.86 9965.54 8767.15 14657.259999999998 12347.869999999999 11320.76 10321.27 16404.38 18186.629999999997 18115.8 True False 14137.859713858836 11816.124447590933 11378.80342270192 10915.102143572316 12501.196470354907 13654.51340754726 13377.595553709021 11784.34163006371 12688.814122411914 14078.257651836908 13617.146889355228 1.0382394953021075 0.8677386345026368 0.835623167992477 0.8015704194323445 0.9180481470848582 1.0027440783664632 0.9824081110681513 0.8654046053711696 0.9318261913096487 1.0338625092486986 1.0 13.733136836220654 -7.001686109252629 24.964835206517506 0.9618629373181964 0.8782809680522344 0.23960639326421418 0.06897972633049634 71.4759458427229 1058319.0644653956 0.009720942962166013 0.018186566410649866 9.961251167796882e-08 7.001686109252629 -0.08358196926596195 (ac)MEVKPPPGRPQPDS(ph)GRR ddPTM_A549_PD325901_60min_R1 5 MEVKPPPGRPQPDSGRR 17 3 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR;MEVKPPPGRPQPDS(1)GRR 74.69800000000001 1.529e-06 495037000.0 14403.8 15062.1 14630.4 13102.600000000002 16567.399999999998 15083.2 14628.8 16033.000000000002 15945.6 16806.9 18049.3 True False 15866.06317248288 16331.436027444543 15623.306923742208 13911.917843836363 15403.762978427205 14960.367420019022 15185.506989186526 15713.209237354817 15275.461884317683 15745.709465716502 15829.35052393966 1.0023192769967217 1.031718642072241 0.9869834457272368 0.8788685185027996 0.9731140235432393 0.9451030474935517 0.9593259664204535 0.9926629152340019 0.9650087577008104 0.9947160777003035 1.0 13.950314442661083 -10.79782276505436 0.7717275764066294 1.0025542147143653 0.9692919974894465 0.07265661544551383 0.03662882532230855 1.840641185822077 1.6893553831829398 0.03916927620988845 0.007225212761702335 1.5928586377188674e-11 10.79782276505436 -0.033262217224918844 (ac)MEVS(ph)PLQPVNENMQVNK ddPTM_A549_MK2206_60min_R1 8 MEVSPLQPVNENMQVNK 17 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK 113.47 3.5384e-11 77589900.0 10950.47 11211.34 10371.52 9337.249999999998 14607.249999999998 12403.91 12154.320000000002 11950.78 17323.35 15668.83 17351.0 True False 12798.641622712714 11781.94931849509 11842.35749137744 11624.876669165074 12458.54287510707 13716.483523150913 14362.602615933618 13644.839662728791 13399.638884705453 12129.230420524951 13042.267836761428 0.9813202567913826 0.9033666127669946 0.9079983358414189 0.8913232587049592 0.9552435995825014 1.0516946665126072 1.1012350609340076 1.0462014607819148 1.0274009897984708 0.9299939682527486 1.0 13.670907131969424 -7.078034777387878 4.43433323841274 1.0255805785014647 0.9190087467539424 0.5554101829482572 0.044447955899338934 0.10893947546851344 3.953978933532409 0.005612585147382794 0.010041002046195357 8.355361075796424e-08 7.078034777387878 -0.10657183174752227 (ac)MEVS(ph)PLQPVNENMQVNK ddPTM_A549_PD325901_60min_R1 4 MEVSPLQPVNENMQVNK 17 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK;MEVS(1)PLQPVNENMQVNK 116.55 7.1796e-13 80973000.0 15503.099999999999 17196.4 15173.800000000001 18269.5 19376.7 18325.5 16737.7 17280.8 17984.6 17848.6 20656.4 True False 17076.963299220977 18645.600978771046 16203.585315471855 19397.965521955066 18015.747437986072 18176.263203800154 17374.662332720876 16936.120887474663 17228.7698051312 16721.63634993886 18115.793751708217 0.9426560896682055 1.0292455983063327 0.8944452303639164 1.0707764610162858 0.9944773982805633 1.0033379410762078 0.959089210820947 0.9348815249057294 0.9510358773822221 0.9230418815273885 1.0 14.14496039906217 -7.762411421547463 24.999975121501045 0.9712599895068306 0.990625492436616 0.07063773779351812 0.047362577022616606 77.51837895977884 1993692.5031690053 0.006856067315466995 0.009772466610497391 1.7281784228410093e-08 7.762411421547463 0.01936550292978545 (ac)MFGAGDEDDTDFLS(ph)PSGGAR ddPTM_A549_PD325901_60min_R1 1 MFGAGDEDDTDFLSPSGGAR 20 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 MFGAGDEDDT(0.012)DFLS(0.908)PS(0.08)GGAR 41.513000000000005 0.0014571 1242600.0 196.78 489.18 429.55 391.44 358.46 210.76 386.62 252.17 424.47 354.18 372.44 True False 216.75696073822044 530.4049153773595 458.70184609398683 415.61835977525874 333.2830062198664 209.0436404372553 401.33303566658185 247.1402715264619 406.6310020341869 331.81701435526304 326.63224109168146 0.6636116508700057 1.6238596459572456 1.4043373200419462 1.2724351961893439 1.0203616308848036 0.6399969572464203 1.2287000031755373 0.7566315887876262 1.2449199768985781 1.015873427700379 1.0 8.351523392699317 -6.7537809803601485 22.879707294933706 1.0571338217161497 1.2800665013227672 0.1273429643410311 0.2778217284286377 99.49615120021197 297238.79083168006 0.03821582215067019 0.07822359240051166 1.7628648550433036e-07 6.7537809803601485 0.22293267960661756 (ac)MHGHGGYDS(ph)DFSDDER ddPTM_A549_PD325901_60min_R1 1 MHGHGGYDSDFSDDER 16 0 Q70Z53;Q70Z53-2;Q70Z53-4;Q70Z53-5;Q70Z53-3 Q70Z53 FRA10AC1 Protein FRA10AC1 1 MHGHGGY(0.004)DS(0.852)DFS(0.144)DDER 44.806999999999995 0.0012078 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MHPAGLAAAAAGT(ph)PR ddPTM_A549_MK2206_60min_R1 4 MHPAGLAAAAAGTPR 15 0 Q5BJH7-4;Q5BJH7-5;Q5BJH7-3;Q5BJH7 Q5BJH7-4 YIF1B Protein YIF1B 1 MHPAGLAAAAAGT(1)PR;MHPAGLAAAAAGT(1)PR;MHPAGLAAAAAGT(1)PR;MHPAGLAAAAAGT(1)PR 75.91 4.3129e-20 44997700.0 5159.08 6136.51 5631.45 5493.8099999999995 7778.030000000001 5465.97 4794.95 5613.700000000001 8548.63 7877.53 7901.99 True False 6029.806576603989 6448.832147846581 6430.074289479023 6839.793696626499 6633.892090494035 6044.375317382763 5666.130348161876 6409.459166235225 6612.37895435696 6097.990501817806 5939.707799170675 1.0151688905379983 1.0857153863270836 1.0825573423623323 1.1515370667866014 1.1168717914743693 1.0176216611575912 0.9539409243250996 1.0790866121613152 1.1132498732143365 1.026648230518887 1.0 12.536176244803217 -7.257740431665712 24.72261697889819 1.0463223510947317 1.093075623160759 0.22562957043022625 0.05014700651047076 486.632475435588 3252498.1280536274 0.00890004835223122 0.015031432954018445 5.524075025442887e-08 7.257740431665712 0.04675327206602731 (ac)MHPAGLAAAAAGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 MHPAGLAAAAAGTPR 15 0 Q5BJH7-4;Q5BJH7-5;Q5BJH7-3;Q5BJH7 Q5BJH7-4 YIF1B Protein YIF1B 1 MHPAGLAAAAAGT(1)PR;MHPAGLAAAAAGT(1)PR 69.485 8.0742e-10 20457900.0 1076.17 1104.92 1101.3899999999999 1331.22 1053.46 1599.04 1094.42 1036.14 1097.72 1311.55 1113.78 True False 1185.4219861655185 1198.0354861170767 1176.1369485961036 1413.4464359800215 979.4686038397051 1586.017948400023 1136.0687519896035 1015.4733748638948 1051.5866458241283 1228.7385091694764 976.7921208331358 1.2135867610750546 1.2264999487252577 1.2040811176823791 1.4470289080285066 1.0027400743203032 1.623700595626488 1.1630609295052625 1.039600292842009 1.0765715891803038 1.2579324535515786 1.0 9.931907752834677 -8.000211723671692 24.999999915865594 1.0404702434035122 1.284167648804848 0.2181969103348057 0.16123407226507216 5.6638151506853855 668874.9200042468 0.021039437055559076 0.028901217184328913 9.995126070442833e-09 8.000211723671692 0.24369740540133566 (ac)MHPEPAPPPS(ph)RSSPELPPSGGSTTSGSR ddPTM_A549_MK2206_60min_R1 1 MHPEPAPPPSRSSPELPPSGGSTTSGSR 28 1 Q96D31 Q96D31 ORAI1 Calcium release-activated calcium channel protein 1 1 MHPEPAPPPS(0.33)RS(0.33)S(0.33)PELPPS(0.002)GGS(0.002)T(0.002)T(0.002)S(0.002)GS(0.002)R 44.317 0.0017772000000000003 4925600.0 0.0 304.24 136.79 304.19 366.85 333.86 202.69 241.59 525.37 305.5 419.04 True False 0.0 319.7245164858926 156.18887889581455 378.7165636556082 312.8868509632564 369.18884360166817 239.51614933814355 275.8361223383451 406.3745338434948 236.48733782103542 314.9808030843472 0.0 1.0150603254391828 0.495867930256021 1.2023480794611903 0.993352127810373 1.1720995057048123 0.7604150697209463 0.875723598509209 1.2901565106959034 0.7507992090480118 1.0 8.299120094136617 -5.423342352377005 1.0145274599286371 1.088657224518667 1.3508952472376347e-19 0.4446283810291215 0.26150956608772047 0.8685190532923005 0.8214767875049138 0.03535536489962293 0.9577877396299604 3.7727466975669846e-06 5.423342352377005 -1.088657224518667 (ac)MHPEPAPPPS(ph)RSSPELPPSGGSTTSGSR ddPTM_A549_PD325901_60min_R1 1 MHPEPAPPPSRSSPELPPSGGSTTSGSR 28 1 Q96D31 Q96D31 ORAI1 Calcium release-activated calcium channel protein 1 1 MHPEPAPPPS(0.329)RS(0.329)S(0.329)PELPPS(0.002)GGS(0.002)T(0.002)T(0.002)S(0.002)GS(0.002)R 42.903999999999996 4.6212e-05 4891100.0 275.8 249.92 275.25 236.34 324.78 134.7 223.66 289.44 377.45 406.07 366.23 True False 303.79901296677093 270.9816354943162 293.93012021271073 250.93818503291592 301.96857323017406 133.60304785964266 232.1715036914482 283.6668921387127 361.5870891177324 380.4306708996601 321.18603172324794 0.9458662051298089 0.8436905989978086 0.9151397980656194 0.7812861091329727 0.940167203442917 0.41596780265575994 0.7228567893995475 0.883185643587191 1.1257870934726584 1.1844558396844003 1.0 8.327265341653007 -8.592339116767244 4.742305413217045 1.0587824581452134 0.7924019407387645 0.4522962566885811 0.1458506444528226 0.15199614929733846 6.62661164678172 0.02491184844382778 0.02838450297939415 2.556588807170251e-09 8.592339116767244 -0.26638051740644897 (ac)MLQQDS(ph)NDDTEDVSLFDAEEETTNRPR ddPTM_A549_PD325901_60min_R1 3 MLQQDSNDDTEDVSLFDAEEETTNRPR 27 1 E5RIS5;I3L376;E5RGC5;A0A0A6YYB9;J3KS67;C9JYS5;Q96ET8-2;Q96ET8-3;Q9NYZ1;Q96ET8 E5RIS5 TVP23C;TVP23B;TVP23C-CDRT4 Golgi apparatus membrane protein TVP23 homolog;Golgi apparatus membrane protein TVP23 homolog C;Golgi apparatus membrane protein TVP23 homolog B 1 MLQQDS(0.997)NDDT(0.003)EDVSLFDAEEETTNRPR;MLQQDS(1)NDDTEDVSLFDAEEETTNRPR;MLQQDS(0.987)NDDT(0.012)EDVSLFDAEEETTNRPR 173.96 9.049999999999999e-69 13844300.0 403.96 0.0 392.53 471.04 334.97 461.77 221.13 377.08000000000004 141.27 479.7 499.84999999999997 True False 444.9697218203656 0.0 419.1694462746423 500.1350709905424 311.44286278376603 458.00949821935575 229.545223156979 369.5588435864628 135.3329131796584 449.41166013388556 438.3716188102163 1.0150513918489001 0.0 0.9561965882104991 1.140892908049016 0.7104539833784235 1.0447973330537195 0.5236315794804128 0.8430263906898942 0.30871732423500686 1.0251842063900785 1.0 8.77601058769183 (ac)MLQQDSNDDTEDVS(ph)LFDAEEETTNRPR ddPTM_A549_PD325901_60min_R1 3 MLQQDSNDDTEDVSLFDAEEETTNRPR 27 1 E5RIS5;I3L376;E5RGC5;A0A0A6YYB9;J3KS67;C9JYS5;Q96ET8-2;Q96ET8-3;Q9NYZ1;Q96ET8 E5RIS5 TVP23C;TVP23B;TVP23C-CDRT4 Golgi apparatus membrane protein TVP23 homolog;Golgi apparatus membrane protein TVP23 homolog C;Golgi apparatus membrane protein TVP23 homolog B 1 MLQQDSNDDT(0.143)EDVS(0.856)LFDAEEET(0.001)T(0.001)NRPR;MLQQDSNDDT(0.017)EDVS(0.982)LFDAEEETTNRPR;MLQQDS(0.002)NDDT(0.153)EDVS(0.785)LFDAEEET(0.03)T(0.03)NRPR 90.376 4.209e-09 7086900.0 669.76 280.47 794.08 506.66999999999996 1072.35 627.8599999999999 607.22 971.48 740.5 691.1600000000001 885.32 True False 737.7535421487478 304.1061912095508 847.9710439909506 537.9658551689407 997.0318354066671 622.7469163263196 630.3280893835338 952.103069288683 709.3793601581154 647.5200396458965 776.4312525058735 0.9501852736706613 0.391671754876006 1.092139247685082 0.6928699140235486 1.2841212047928543 0.8020631759945915 0.8118273026094677 1.2262554684858986 0.91364091523705 0.8339695723943031 1.0 9.60071437960348 -5.781450610673443 24.99999947263395 0.9665083762391012 0.6709281900904868 0.22105456827254888 0.2105033409850511 193.52080433612082 241765.76750356687 0.024709155108715967 0.07696432818206686 1.654052878141506e-06 5.781450610673443 -0.2955801861486145 (ac)MLS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 MLSPQR 6 0 Q6DD88;Q9BVN2-4;Q9BVN2 Q6DD88 ATL3;RUSC1 Atlastin-3;RUN and SH3 domain-containing protein 1 1 MLS(1)PQR;MLS(1)PQR 51.787 0.014631 33070000.0 0.0 0.0 0.0 375.46000000000004 146.17 128.87 155.6 212.73 729.05 486.27 330.95 True False 0.0 0.0 0.0 467.44771685503986 124.6685866302281 142.50693786301733 183.87050588097645 242.88512895830198 563.9213390536191 376.4212692708178 248.76598124466568 0.0 0.0 0.0 1.8790660785539517 0.5011480508969367 0.5728554087259192 0.7391304267609509 0.9763599015551094 2.2668748203919113 1.513154119335155 1.0 7.958645400141869 -8.526829726627259 4.8043633414036595 1.6014531841614934 0.5548308994500752 0.4020656282857702 0.5673757000332504 0.16294273117913852 10.296744838325512 0.11333408629126214 0.13205533845021697 2.972831358088034e-09 8.526829726627259 -1.0466222847114182 (ac)MLS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 MLSPQR 6 0 Q6DD88;Q9BVN2-4;Q9BVN2 Q6DD88 ATL3;RUSC1 Atlastin-3;RUN and SH3 domain-containing protein 1 1 MLS(1)PQR;MLS(1)PQR 62.464 0.007587699999999999 53968000.0 236.48 701.13 689.42 500.78 837.69 647.5799999999999 801.73 779.12 1115.3899999999999 1234.81 942.1400000000001 True False 260.48727551262533 760.2166857159491 736.2081870192441 531.7120432461019 778.8535442736153 642.3063231844644 832.2402738734901 763.579840392184 1068.5140371732086 1156.843885866007 826.26275271753 0.3152596128240053 0.9200665081605588 0.8910097721310785 0.6435144770804831 0.9426221159213717 0.7773632795039549 1.0072344071378025 0.9241368292117906 1.2931891624775875 1.4000920192290103 1.0 9.690456823433307 -7.840500190984202 1.0483026128432233 1.132815256068163 0.7369077151751673 0.5010398196259471 0.19608353132471698 0.3258871502288436 0.7214622380276571 0.034070991255529766 0.05523507940425375 1.4437759693794631e-08 7.840500190984202 -0.39590754089299574 (ac)MLT(ph)DSGGGGTSFEEDLDSVAPR ddPTM_A549_PD325901_60min_R1 1 MLTDSGGGGTSFEEDLDSVAPR 22 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;E9PDP5;D6RHC4;Q8IWZ3-5;Q8IWZ3-3;Q8IWZ3-2 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 MLT(0.25)DS(0.25)GGGGT(0.25)S(0.25)FEEDLDSVAPR 70.332 0.00069925 940910.0 0.0 0.0 154.54 0.0 187.56 0.0 0.0 172.48 0.0 229.76 0.0 True False 0.0 0.0 165.02801372451333 0.0 174.38643264687326 0.0 0.0 169.03975109205754 0.0 215.25291438891313 0.0 0.0 (ac)MLTDSGGGGTS(ph)FEEDLDSVAPR ddPTM_A549_PD325901_60min_R1 1 MLTDSGGGGTSFEEDLDSVAPR 22 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;E9PDP5;D6RHC4;Q8IWZ3-5;Q8IWZ3-3;Q8IWZ3-2 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 MLT(0.243)DS(0.243)GGGGT(0.243)S(0.271)FEEDLDSVAPR 58.158 1.269e-07 1525500.0 0.0 0.0 0.0 226.98 0.0 191.25 191.45 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 241.0000390910183 0.0 189.69252340873538 198.73573451545985 0.0 0.0 0.0 0.0 0.0 (ac)MNGFS(ph)TEEDSR ddPTM_A549_PD325901_60min_R1 1 MNGFSTEEDSR 11 0 Q9HAJ7-2;Q9HAJ7-3;Q9HAJ7 Q9HAJ7-2 SAP30L Histone deacetylase complex subunit SAP30L 1 MNGFS(0.887)T(0.111)EEDS(0.002)R 57.019 0.0025725 567990.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MNGHS(ph)DEESVR ddPTM_A549_PD325901_60min_R1 1 MNGHSDEESVR 11 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 MNGHS(1)DEESVR 62.924 0.0013583 1147800.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MNLIIICMARQSCNPLVLFEAEIEK ddPTM_A549_PD325901_60min_R1 1 MNLIIICMARQSCNPLVLFEAEIEK 25 1 Q13472-3 Q13472-3 TOP3A DNA topoisomerase 3-alpha 0 51.503 0.015105 9196900.0 1866.7 1831.2 2336.2 2344.1 3260.0 2575.5 3076.9 3211.8 2600.9 2776.6 2386.7 False True 2056.2060098080897 1985.5216505969597 2494.748580711841 2488.8897331626395 3031.0288463894594 2554.525981904304 3193.9931132442857 3147.7381293916446 2491.5932178733856 2601.2850021424806 2093.1510305378483 0.9823495676180303 0.9485802130994663 1.1918626722653642 1.1890636159795425 1.4480698249522002 1.2204212427270011 1.5259257772830512 1.503827522939333 1.190355202048251 1.2427602997544158 1.0 11.03146069713811 -3.9811366305106572 13.158380150834256 1.1688909041469142 1.144591822924463 0.0 0.19976425590542995 0.0 0.0 0.02933392586084098 0.0 0.00010443915984070409 3.9811366305106572 -0.02429908122245128 (ac)MNLLPNIES(ph)PVTR ddPTM_A549_MK2206_60min_R1 1 MNLLPNIESPVTR 13 0 E9PM69;P17980 E9PM69 PSMC3 26S protease regulatory subunit 6A 1 MNLLPNIES(0.966)PVT(0.034)R 58.32 0.00021719999999999997 1732400.0 149.0 0.0 193.55 0.0 190.57 225.34 127.92 211.1 122.16 169.55 223.63 True False 174.14755729975 0.0 220.99830038953812 0.0 162.5374054465525 249.18532923141396 151.16140817669995 241.02407146663637 94.49095504943438 131.2485372424109 168.09649912598448 1.0359975264519363 0.0 1.3147109043829934 0.0 0.9669291525502529 1.482394520570326 0.8992537558049197 1.4338434929926431 0.5621232776455122 0.7807928060657773 1.0 7.39314586826805 (ac)MNLLPNIES(ph)PVTR ddPTM_A549_PD325901_60min_R1 2 MNLLPNIESPVTR 13 0 E9PM69;P17980 E9PM69 PSMC3 26S protease regulatory subunit 6A 1 MNLLPNIES(0.828)PVT(0.172)R;MNLLPNIES(0.792)PVT(0.208)R 76.759 2.6385999999999998e-05 11780300.0 1086.1 807.98 824.0 783.0699999999999 1284.43 995.23 756.9200000000001 1182.58 762.63 785.95 1233.48 True False 1196.3600724554385 876.0713102060568 879.9215951145272 831.4384554189962 1194.2160678429475 987.125176847455 785.7250048025167 1158.9925141839367 730.5793132172633 736.3249828689337 1081.7697796739535 1.1059285394495144 0.8098500500449417 0.8134092961810566 0.7685909433239969 1.1039465977713718 0.9125094778899957 0.7263329218157074 1.0713855535262393 0.6753556319880378 0.6806669928335979 1.0 10.079177784693107 (ac)MNPEY(ph)DYLFK ddPTM_A549_PD325901_60min_R1 1 MNPEYDYLFK 10 0 Q9H0U4;E9PLD0 Q9H0U4 RAB1B Ras-related protein Rab-1B 1 MNPEY(0.998)DY(0.002)LFK 78.905 0.00021821 1090500.0 558.89 607.37 682.12 612.16 594.88 763.52 691.13 585.57 698.69 901.59 954.61 True False 615.628101366928 658.5552014652005 728.4127651207785 649.9717328837688 553.097681024589 757.3021462642496 717.4313303508471 573.8903469792216 669.3264890599244 844.6634535336882 837.1990217713732 0.7353425951984056 0.786617261056765 0.8700592644979194 0.7763646587982596 0.6606525648516964 0.9045664490409041 0.8569423896756143 0.6854885541611905 0.7994831236708105 1.0089159585333982 1.0 9.7094268156464 -10.49543136690409 0.7015751948575494 1.0094251515906771 0.7862924690914307 0.5774140655438997 0.0714334098972717 0.4647715838381462 0.3897321144811958 0.05827809276521781 0.014470243533034945 3.195719355758333e-11 10.49543136690409 -0.22313268249924645 (ac)MNPVYS(ph)PGSSGVPYANAK ddPTM_A549_MK2206_60min_R1 1 MNPVYSPGSSGVPYANAK 18 0 A1KXE4-2;A1KXE4 A1KXE4-2 FAM168B Myelin-associated neurite-outgrowth inhibitor 1 MNPVY(0.424)S(0.494)PGS(0.07)S(0.011)GVPY(0.002)ANAK 45.915 0.00043074 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MNS(ph)SDEEK ddPTM_A549_MK2206_60min_R1 1 MNSSDEEK 8 0 A0MZ66;A0MZ66-4;A0MZ66-3;A0MZ66-2 A0MZ66 KIAA1598 Shootin-1 1 MNS(0.916)S(0.084)DEEK 90.62899999999999 0.00050483 1983000.0 184.32 0.0 0.0 0.0 0.0 141.38 0.0 147.41 160.46 0.0 158.44 True False 215.42870980865726 0.0 0.0 0.0 0.0 156.3407377595514 0.0 168.30581892419167 124.11606620196655 0.0 119.09497527845546 1.8088816031487835 0.0 0.0 0.0 0.0 1.312739999265391 0.0 1.4132067161580624 1.0421603926762761 0.0 1.0 6.895968735690641 -8.264022605192336 24.99374631649032 1.0499626774160087 0.4106771103794037 0.057763287388798434 0.6639343473948268 259.073858632497 2506639.195210704 0.08967495855652327 0.11096142564539682 5.444743120106121e-09 8.264022605192336 -0.639285567036605 (ac)MNS(ph)SDEEK ddPTM_A549_PD325901_60min_R1 1 MNSSDEEK 8 0 A0MZ66;A0MZ66-4;A0MZ66-3;A0MZ66-2 A0MZ66 KIAA1598 Shootin-1 1 MNS(0.883)S(0.117)DEEK 62.463 0.0018953 2901900.0 207.24 166.77 270.12 222.15 189.95 260.23 192.96 263.92 307.24 504.72 355.83 True False 228.27885223797549 180.82429317936595 288.45196756351453 235.87170096074422 176.60856729192562 258.11077315898154 200.3031983917635 258.65590855876525 294.3277712558804 472.85189306394574 312.0651657922164 0.7315102012698569 0.5794440168300133 0.9243324766198854 0.7558411729869127 0.565934896461714 0.8271053659697489 0.6418633681310402 0.8288522299569544 0.943161248096027 1.515234460288293 1.0 8.285703515492028 -8.645240980718837 2.411128782407147 0.9762023541933313 0.7200080824447919 0.43315798122787275 0.18995418682844964 0.14347622551955738 1.6605984022706255 0.016829673453384143 0.018949062759705194 2.263388053471998e-09 8.645240980718837 -0.2561942717485395 (ac)MNTAPS(ph)RPSPTR ddPTM_A549_MK2206_60min_R1 2 MNTAPSRPSPTR 12 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNT(0.002)APS(0.654)RPS(0.341)PT(0.003)R;MNT(0.001)APS(0.589)RPS(0.409)PT(0.001)R 63.727 0.00022008 219010000.0 0.0 120.27 335.07 125.98 117.81 149.15 0.0 309.99 211.248 322.99 571.64 True False 0.0 126.39122928529544 382.58796440982945 156.84510565545708 100.48030506196334 164.93295400224284 0.0 353.93203180456015 163.40066529373698 250.0263346737027 429.68601153860294 0.0 0.29414787982675683 0.8903896197129466 0.3650226012567461 0.23384588365389736 0.3838452953393976 0.0 0.8236992182668784 0.38027922926473273 0.5818814854558987 1.0 8.747139000602234 -10.956020327403584 0.44831740193118047 1.2153903069075251 0.35176208352127436 0.19177100581758943 0.2901716903551155 1.632291802225509 0.37086010405744974 0.6561347026044068 0.06842052176058776 1.1065719890256759e-11 10.956020327403584 -0.8636282233862508 (ac)MNTAPS(ph)RPSPTR ddPTM_A549_PD325901_60min_R1 1 MNTAPSRPSPTR 12 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNT(0.001)APS(0.872)RPS(0.126)PT(0.001)R 74.392 4.6537e-05 174350000.0 0.0 0.0 158.59 0.0 0.0 0.0 169.2 0.0 209.27 234.88 134.53 True False 0.0 0.0 169.35287107914186 0.0 0.0 0.0 175.63899858979264 0.0 200.47510965602822 220.04963671512843 117.98366285593362 0.0 0.0 1.4353925533396406 0.0 0.0 0.0 1.488672196965611 0.0 1.699176858925142 1.865085651594192 1.0 6.882443293866234 -8.762210464563708 24.99994006470017 1.3301668617385611 0.38987528851451214 0.4279488291871074 0.5833909991754715 16.386413500212477 531273.2395342629 0.09804678080361519 0.10741292817698211 1.728978271559135e-09 8.762210464563708 -0.940291573224049 (ac)MNTAPS(ph)RPSPTRR ddPTM_A549_MK2206_60min_R1 2 MNTAPSRPSPTRR 13 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNT(0.001)APS(0.444)RPS(0.444)PT(0.111)RR;MNTAPS(0.441)RPS(0.441)PT(0.117)RR 64.565 5.8119e-05 763750000.0 1256.25 1171.6 1211.75 1006.73 1508.3600000000001 1245.64 1043.42 1223.92 1528.03 1762.29 2303.1499999999996 True False 1468.2742876363154 1231.2294356917953 1383.5943709481926 1253.3788951938263 1286.482242112409 1377.4527980110881 1232.9959077527542 1397.4144080977997 1181.933644762501 1364.1874650364387 1731.2142912937045 0.8481181648166162 0.7111941265062688 0.7992045686696926 0.7239883020242396 0.7431097632350554 0.7956570165451575 0.7122144924250591 0.8071874262622553 0.682719436124377 0.787994572305088 1.0 10.757568598535949 -10.867804805317467 1.0277597817727593 1.0051537045062953 0.7524885468027459 0.14865278344306254 0.07752667862071233 0.18953071930787974 0.34329907953704053 0.035873305655679574 0.007992804103894642 1.3557986423387828e-11 10.867804805317467 -0.25266515770354936 (ac)MNTAPS(ph)RPSPTRR ddPTM_A549_PD325901_60min_R1 2 MNTAPSRPSPTRR 13 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.447)RPS(0.447)PT(0.106)RR;MNT(0.003)APS(0.434)RPS(0.281)PT(0.281)RR 61.265 8.712700000000001e-05 487096000.0 1700.63 1662.4499999999998 1801.24 1766.62 1907.88 1681.38 1525.17 2126.4 1776.5900000000001 2275.2 2417.1 True False 1873.2767056623636 1802.5504958687814 1923.4829781360318 1875.740105114878 1773.877090628687 1667.687398739762 1583.211178955048 2083.9872838714705 1701.9261005581457 2131.5434837119383 2119.812023259326 0.8836994436809067 0.8503350656051389 0.9073837477242781 0.8848615275947089 0.8368086750924522 0.7867147560450206 0.7468639490593958 0.9831000395342729 0.8028665192403909 1.0055341984684918 1.0 11.049720622499903 -10.90964668472469 1.0216569742969777 1.0049863421453284 0.8500300951345019 0.470306267365051 0.06077025991498016 0.4246754222410775 0.7436824583766454 0.0500689070444897 0.010409950946853487 1.231270049039593e-11 10.90964668472469 -0.15495624701082655 (ac)MNTAPSRPS(ph)PTR ddPTM_A549_MK2206_60min_R1 8 MNTAPSRPSPTR 12 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.027)RPS(0.962)PT(0.011)R;MNT(0.003)APS(0.123)RPS(0.87)PT(0.003)R;MNT(0.001)APS(0.349)RPS(0.647)PT(0.003)R;MNTAPS(0.111)RPS(0.887)PT(0.002)R;MNT(0.001)APS(0.145)RPS(0.849)PT(0.005)R;MNTAPS(0.117)RPS(0.881)PT(0.002)R;MNTAPS(0.027)RPS(0.97)PT(0.003)R;MNTAPS(0.189)RPS(0.672)PT(0.139)R 104.74 1.3885e-12 569571600.0 3322.7889999999998 3176.08 3184.24 2483.9800000000005 3615.3 3831.7700000000004 3240.67 3473.509 4787.24 4746.4800000000005 5613.24 True False 3883.5945488085845 3337.7289058654815 3635.813113058034 3092.5552115101004 3083.4941591589527 4237.245358076931 3829.4577910880707 3965.889537925176 3702.937783651391 3674.246871426474 4219.31759045719 0.9204319100302123 0.7910589412407368 0.8617064335903832 0.7329515129424051 0.7308039968673788 1.0042489732605784 0.9076012196259264 0.9399362463007783 0.8776153262381355 0.8708154322719154 1.0 12.042793968790392 -7.264502123964652 24.98722172899809 0.9416660969086221 0.8053652929927905 0.4876109470179236 0.06397987068526075 174.98614689481838 1427614.8610728218 0.010004081682110933 0.016408441022895372 5.438734718412194e-08 7.264502123964652 -0.13630080391583166 (ac)MNTAPSRPS(ph)PTR ddPTM_A549_PD325901_60min_R1 13 MNTAPSRPSPTR 12 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.103)RPS(0.888)PT(0.009)R;MNTAPS(0.13)RPS(0.869)PTR;MNT(0.001)APS(0.122)RPS(0.862)PT(0.015)R;MNTAPS(0.044)RPS(0.954)PT(0.003)R;MNT(0.003)APS(0.123)RPS(0.87)PT(0.003)R;MNT(0.004)APS(0.12)RPS(0.875)PT(0.002)R;MNTAPS(0.08)RPS(0.91)PT(0.011)R;MNT(0.002)APS(0.162)RPS(0.828)PT(0.008)R;MNTAPS(0.117)RPS(0.881)PT(0.002)R;MNT(0.001)APS(0.158)RPS(0.835)PT(0.006)R;MNT(0.001)APS(0.151)RPS(0.844)PT(0.004)R;MNTAPS(0.029)RPS(0.968)PT(0.002)R;MNTAPS(0.022)RPS(0.954)PT(0.024)R 122.07 6.2745e-16 820051000.0 4153.84 4446.070000000001 4911.78 5081.19 5903.2699999999995 4326.070000000001 3936.0300000000007 4300.259999999999 5735.52 5417.75 6069.62 True False 4575.5347789046145 4820.755922384024 5245.122927732563 5395.043566080233 5488.644680375921 4290.839920223936 4085.817775528261 4214.487940811293 5494.476040208072 5075.672340400999 5323.0952184912785 0.8595628278468885 0.9056302253692107 0.9853520766474632 1.013516261617681 1.0311002255435069 0.8060798734763355 0.7675642850300735 0.7917363428275856 1.0321957084520024 0.9535189832353954 1.0 12.378049657804413 -8.798436280238436 24.999863772280886 1.0152035694368549 0.899695564839265 0.20136118954278825 0.08602742989422005 175.39588030657166 118519.25584805448 0.01620081925280591 0.017247307377691066 1.590610041283527e-09 8.798436280238436 -0.11550800459758981 (ac)MNTAPSRPS(ph)PTRR ddPTM_A549_MK2206_60min_R1 4 MNTAPSRPSPTRR 13 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.118)RPS(0.844)PT(0.037)RR;MNTAPS(0.044)RPS(0.478)PT(0.478)RR;MNT(0.001)APS(0.119)RPS(0.44)PT(0.44)RR;MNTAPS(0.239)RPS(0.593)PT(0.168)RR 55.54600000000001 0.00020774 214983000.0 3281.34 3608.5599999999995 2728.24 2799.5 3811.69 3098.21 2929.84 3016.05 4220.7 4556.6 4600.17 True False 3835.14997093934 3792.2202905940453 3115.1454562374224 3485.3776256743286 3250.9954503152117 3426.0605257746456 3462.1540035367602 3443.5843237657455 3264.718189072917 3527.2608953038607 3457.820830766804 1.1091233926336372 1.096708151229769 0.9008984585087972 1.0079694108677728 0.9401862066966242 0.9908149361847891 1.0012531513291263 0.9958828095214228 0.9441548156643313 1.0200820308325973 1.0 11.755647401397944 -5.688517087172528 9.088299474557655 0.9740656874241799 1.104325521823689 0.6636727633427885 0.03423952838930613 0.1191675506653175 13.591374928059672 0.0042822305523414475 0.016641899049154717 2.048721442105282e-06 5.688517087172528 0.13025983439950906 (ac)MNTAPSRPS(ph)PTRR ddPTM_A549_PD325901_60min_R1 5 MNTAPSRPSPTRR 13 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.038)RPS(0.76)PT(0.202)RR;MNT(0.004)APS(0.211)RPS(0.672)PT(0.113)RR;MNTAPS(0.165)RPS(0.776)PT(0.059)RR;MNT(0.002)APS(0.176)RPS(0.647)PT(0.176)RR;MNT(0.001)APS(0.239)RPS(0.584)PT(0.176)RR 64.565 5.8119e-05 911339000.0 2458.2200000000003 2712.2 3148.14 2706.9 2714.16 2636.09 3041.5 2917.9 3210.2000000000003 2754.25 3314.83 True False 2707.776684754083 2940.7666124667294 3361.791711703699 2874.09906518406 2523.5267649436855 2614.622557032853 3157.2459468726615 2859.700195451733 3075.2864577712126 2580.3461849567557 2907.126924438671 0.9314270601641929 1.0115714548770705 1.1563966070565763 0.9886390033483012 0.8680483620201572 0.8993836956526083 1.0860364988990927 0.9836860480399923 1.0578438911348913 0.8875932327774053 1.0 11.505378345218054 -7.7812458510900395 24.999366920543647 1.0280464349385796 0.9814114996328116 0.0 0.08548905230528768 525.4968396272064 663270.6076956975 0.012373828876318856 0.017108873303296572 1.654832908847576e-08 7.7812458510900395 -0.04663493530576801 (ac)MNVT(ph)PEVK ddPTM_A549_MK2206_60min_R1 2 MNVTPEVK 8 0 A0A0A0MRK1;Q5T3I0;F8W895;E9PPY4;F2Z3C6 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 MNVT(1)PEVK;MNVT(1)PEVK 45.137 0.0063808 1550060.0 523.4100000000001 519.16 302.88 545.51 631.12 446.39 513.0 380.97 665.5799999999999 549.0699999999999 577.83 True False 611.7488118541088 545.5830264883514 345.83293837242724 679.1599744888747 538.2830840396084 493.62669351029916 606.2054596204429 434.97366417169314 514.8271927128562 425.0347056543237 434.338863703294 1.4084597602852487 1.2561229769690851 0.7962283996964015 1.5636638377191665 1.2393159558646376 1.136501323647395 1.3956970243274258 1.0014615327373348 1.1853122889425467 0.9785785734906601 1.0 8.762677237578032 -10.843606128986023 0.281544463589152 0.8838540037036269 1.2546990223205041 0.1940777087954988 0.1931586067748346 6.339294437240201 0.6106293232406973 0.7779791032557263 0.10672797114956031 1.4334873704778691e-11 10.843606128986023 0.37084501861687724 (ac)MNYPGRGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 MNYPGRGSPR 10 1 A0A087X0H7;Q8NEL9-2;Q8NEL9-4;Q8NEL9 A0A087X0H7 DDHD1 Phospholipase DDHD1 1 MNY(0.001)PGRGS(0.999)PR 41.163999999999994 0.0034813 4864600.0 677.53 499.66 737.27 847.08 991.21 697.97 587.12 965.35 887.72 894.23 1255.8 True False 746.312346828776 541.7681017569224 787.3055757646689 899.4022077417385 921.5908290888639 692.2859637312157 609.4631728843914 946.0953369475752 850.412215529456 837.7681651897539 1101.3445611720913 0.6776374743563658 0.49191517428510556 0.7148585497410451 0.8166401682544849 0.8367870161433159 0.6285825418654264 0.5533810165964577 0.8590366451174062 0.7721581832886305 0.7606776250823541 1.0 10.105050178565778 -14.999999945514029 0.1298496266208026 2.0597542107052136 0.5737673881111143 0.15919764937452863 0.1272093206354384 41.05967252305589 0.3649227549659279 11.160437096465971 0.3237072945700963 1.0000001254585931e-15 14.999999945514029 -1.4859868225940993 (ac)MQNDAGEFVDLYVPR ddPTM_A549_MK2206_60min_R1 1 MQNDAGEFVDLYVPR 15 0 Q8WVC2;P63220;Q9BYK2;Q9BYK1 Q8WVC2 RPS21 40S ribosomal protein S21 0 71.555 0.0008883 586010.0 419.48 299.98 437.95 368.2 492.69 460.86 331.04 663.7 762.38 776.84 714.91 False True 490.27796869865176 315.2477006818239 500.05789540479543 458.40901652912606 420.2159536624966 509.62789930589065 391.1856829488334 757.7815074960046 589.7021472706925 601.3513044611888 537.3781164877595 0.912351942991373 0.586640376690897 0.930551282350527 0.8530474212929134 0.7819744436356637 0.9483599790716433 0.7279523876141017 1.4101458251571088 1.0973691134371395 1.119046879674875 1.0 9.06979376181912 -8.195484984041247 24.99999815519228 1.074579695581499 0.8201232783064176 0.5391588063770908 0.14249665037740103 137.26851394904085 52031.48768953939 0.022201648873460964 0.02866220706755445 6.375511243172487e-09 8.195484984041247 -0.2544564172750814 (ac)MQT(ph)PVNIPVPVLR ddPTM_A549_MK2206_60min_R1 1 MQTPVNIPVPVLR 13 0 Q9H840 Q9H840 GEMIN7 Gem-associated protein 7 1 MQT(1)PVNIPVPVLR 65.305 0.0012013 1118900.0 0.0 0.0 0.0 0.0 138.59 0.0 0.0 0.0 196.54 0.0 0.0 True False 0.0 0.0 0.0 0.0 118.20359458906289 0.0 0.0 0.0 152.0240038098872 0.0 0.0 0.0 (ac)MQT(ph)PVNIPVPVLR ddPTM_A549_PD325901_60min_R1 2 MQTPVNIPVPVLR 13 0 Q9H840 Q9H840 GEMIN7 Gem-associated protein 7 1 MQT(1)PVNIPVPVLR;MQT(1)PVNIPVPVLR 100.55 3.9431e-05 11241700.0 394.88 451.36 558.04 445.47 564.52 621.0 398.6 489.66999999999996 293.08000000000004 421.16999999999996 607.59 True False 434.967926904708 489.3976912480575 595.9119501671248 472.9856701642258 524.8700626882749 615.9427818918941 413.76894112228933 479.90314771131614 280.762866813154 394.57725432267796 532.860281830348 0.8162888879813209 0.9184352970857602 1.1183268306660004 0.8876354389551123 0.9850050390045453 1.155917982432772 0.776505502907843 0.900617223829994 0.5268977185703311 0.7404891446728309 1.0 9.057613491737587 -7.807297587530422 24.720060787186288 0.7821849543403377 0.9797378820021789 0.31405988953858954 0.1406615923543983 136.98117947916637 73839.74638916842 0.02944082269758137 0.04067843473525807 1.558484231350056e-08 7.807297587530422 0.19755292766184118 (ac)MRS(ph)PVRDLAR ddPTM_A549_PD325901_60min_R1 1 MRSPVRDLAR 10 2 Q9NRA2-2;Q9NRA2 Q9NRA2-2 SLC17A5 Sialin 1 MRS(1)PVRDLAR 44.61600000000001 0.009648299999999999 2695400.0 0.0 0.0 0.0 0.0 0.0 116.43 0.0 0.0 0.0 0.0 98.76100000000001 True False 0.0 0.0 0.0 0.0 0.0 115.48183268224348 0.0 0.0 0.0 0.0 86.61402309756086 0.0 0.0 0.0 0.0 0.0 1.3332925610921722 0.0 0.0 0.0 0.0 1.0 6.436528715861109 -10.780068336369926 0.908831922425397 1.0277102808896963 0.14911602422329204 0.0 0.47852344261097357 0.5143927705339676 0.7156672168606703 0.310688132872961 0.06922699715673049 1.659325791472557e-11 10.780068336369926 -0.8785942566664042 (ac)MRT(ph)RPRPR ddPTM_A549_MK2206_60min_R1 1 MRTRPRPR 8 3 M0R0M8;M0QX83;Q9UP65-3 M0R0M8 PLA2G4C 1 MRT(1)RPRPR 57.59 0.029507 2544500.0 248.44 174.4 177.15 244.97 270.9 172.45 137.76 369.1 228.71 580.74 403.09 True False 290.3705982251669 183.27621507737206 202.27253378458633 304.98766099712117 231.05096885906002 190.69854453695453 162.78920880567688 421.42105532134275 176.90755017482104 449.55043065855347 302.9916282819527 0.9583452845600038 0.6048887096867971 0.6675845630835683 1.0065877487324864 0.762565520932653 0.6293855233501618 0.5372729594171866 1.3908669942827068 0.5838694328880845 1.483705781600733 1.0 8.243134122077025 -11.161761183954576 1.5436994355849336 1.0003557145521655 0.7640877864164946 0.1815572740941358 0.28140293694287066 0.7121652552678022 3.037100867232361 0.1706362701723728 0.035957846265165315 6.890310864311175e-12 11.161761183954576 -0.236267928135671 (ac)MS(ph)GDEMIFDPTMSK ddPTM_A549_PD325901_60min_R1 1 MSGDEMIFDPTMSK 14 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 MS(0.995)GDEMIFDPT(0.004)MS(0.001)K 40.589 0.00024534 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MS(ph)PEVALNR ddPTM_A549_PD325901_60min_R1 2 MSPEVALNR 9 0 C9J2G0;F8W733;Q9NXR7-4;Q9NXR7-3;Q9NXR7;Q9NXR7-1 C9J2G0 BRE BRCA1-A complex subunit BRE 1 MS(1)PEVALNR;MS(1)PEVALNR 51.854 0.008787600000000001 563460.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)MT(ph)PPQQPPPLR ddPTM_A549_MK2206_60min_R1 2 MTPPQQPPPLR 11 0 A0A0A0MSF0;D6RA68;A0A0A0MSC7;Q9H9P5-2;Q9H9P5-1 A0A0A0MSF0 UNKL 1 MT(1)PPQQPPPLR;MT(1)PPQQPPPLR 98.39200000000001 1.3569000000000002e-05 3950900.0 417.61 421.25 457.08000000000004 586.94 443.6 475.53999999999996 238.02 517.13 810.26 604.4200000000001 589.59 True False 488.09235841576265 442.6898256957737 521.90081706045 730.7403263487381 378.3470276333667 525.8613271620951 281.26515301921603 590.4347611442049 626.7374037193412 467.88110221207893 443.1785311438056 1.10134477217576 0.9988972718358657 1.1776310908235308 1.6488621966022592 0.8537124455394659 1.1865676927194382 0.6346542832147011 1.3322729321304072 1.4141871947221494 1.05573954813316 1.0 8.79174418451344 -11.315073640736774 1.9101911880042204 0.9991864925143596 1.192301751681618 0.009607747788606846 0.2613149108518509 0.8698743212329944 5.735213517301471 0.20368604500032317 0.03975643751576227 4.840902763104506e-12 11.315073640736774 0.19311525916725825 (ac)MT(ph)PPQQPPPLR ddPTM_A549_PD325901_60min_R1 2 MTPPQQPPPLR 11 0 A0A0A0MSF0;D6RA68;A0A0A0MSC7;Q9H9P5-2;Q9H9P5-1 A0A0A0MSF0 UNKL 1 MT(1)PPQQPPPLR;MT(1)PPQQPPPLR 86.01100000000001 6.8167e-05 5715700.0 1601.85 1667.21 1282.2800000000002 1839.75 1600.51 1439.8400000000001 1257.44 1491.39 1318.19 1310.94 1457.6999999999998 True False 1764.4686327803563 1807.7116377740044 1369.303231776039 1953.3871791245979 1488.0956990597522 1428.1144204174302 1305.2925672975696 1461.643056477179 1262.7910584292053 1228.1670246735796 1278.412141121642 1.3802032818870622 1.4140288406428698 1.0710968612787515 1.5279792144423412 1.164018747314258 1.11710017018803 1.0210264165297613 1.1433269518191336 0.9877808711369628 0.9606972471303513 1.0 10.320137299427355 -7.285460674313375 1.372459443230519 1.0060844249694691 1.336408452167369 0.59939815956309 0.11650283244714744 0.19251267959994764 0.7109157171786413 0.017253675431449202 0.03429289133048133 5.182500178051225e-08 7.285460674313375 0.33032402719789977 (ac)MT(ph)T(ph)SQKHR ddPTM_A549_PD325901_60min_R1 1 MTTSQKHR 8 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 MT(0.973)T(0.977)S(0.05)QKHR 41.979 0.011488 9924600.0 650.22 539.17 395.57 425.22 774.0 636.08 398.34 398.87 663.92 513.26 560.55 True False 716.2298557333352 584.6077481172794 422.41575895564733 451.48487365531247 719.6369101550429 630.8999753716516 413.49904668001193 390.9142249425385 636.0177512439924 480.8526760065003 491.6059036192197 1.4569187441819273 1.1891796738268943 0.8592568881817892 0.9183878190466493 1.4638492029022658 1.283344993880147 0.8411189606060823 0.7951780523069687 1.2937553161213233 0.9781263253074185 1.0 8.941358430690814 (ac)MT(ph)TS(ph)QKHR ddPTM_A549_PD325901_60min_R1 1 MTTSQKHR 8 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 MT(0.946)T(0.473)S(0.581)QKHR 45.137 0.018496000000000002 9030400.0 1244.4 1431.8 1180.2 1450.3 1415.9 1050.1 913.86 1277.8 1428.5 1120.5 1660.8 True False 1370.7305719211386 1552.462810902538 1260.2954691191328 1539.8817371297202 1316.4520685898267 1041.5483337595451 948.6374423833805 1252.3132765852915 1368.4651127425627 1049.751438774274 1456.5321286786182 0.9410918886936468 1.0658623866477626 0.865271314174502 1.0572246961189369 0.9038263164054791 0.7150877850558979 0.6512986728579717 0.8597910419740646 0.9395365099045561 0.720719727429988 1.0 10.508321809946793 -5.764273019858661 24.999731506100183 0.9209397545163907 1.0034771295069453 0.0 0.13323056652707896 170.95266640063838 1508298.8367028215 0.018583795152376334 0.06172576916846766 1.7207864599704217e-06 5.764273019858661 0.08253737499055469 (ac)MTT(ph)SQKHR ddPTM_A549_MK2206_60min_R1 1 MTTSQKHR 8 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 MT(0.15)T(0.725)S(0.124)QKHR 75.387 0.0025432 18096000.0 688.05 1189.2 934.62 874.8 637.25 534.99 670.02 572.56 672.68 1088.8 1149.5 True False 804.176018792571 1249.725200516117 1067.1631697756138 1089.1260392712643 543.5113691599703 591.602286702379 791.7539611206423 653.7221333914605 520.3190540492267 842.8393237955588 864.047425413939 0.9307081939481673 1.4463618127412525 1.2350747637079853 1.2604933563102707 0.6290295569130253 0.6846872860236349 0.9163316015221468 0.7565813104278182 0.6021880729520808 0.9754549333814403 1.0 9.754966690278925 -6.7503052456019335 24.991583535114696 0.7914783617302479 1.2356680450396713 0.5979286566751006 0.16672478709417812 122.13200280199719 274134.61318746675 0.02625757357226922 0.0542624994000783 1.7770299784264032e-07 6.7503052456019335 0.44418968330942343 (ac)MTT(ph)SQKHR ddPTM_A549_PD325901_60min_R1 1 MTTSQKHR 8 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 MT(0.048)T(0.555)S(0.397)QKHR 96.14299999999999 0.0011560000000000001 30017000.0 1740.7 1624.5 1364.4 1551.5 1498.3 1726.0 1346.3 1345.9 1373.8 1517.3 1344.8 True False 1917.4145825643882 1761.402316183245 1456.996388803714 1647.3326312878446 1393.0645768543939 1711.9440282534767 1397.5341832236272 1319.0549686618758 1316.0639635181892 1421.497419055962 1179.3981253895756 1.6257568511320406 1.4934755942582352 1.23537282062615 1.3967570371910691 1.1811656698998403 1.451540401328001 1.1849554049121431 1.118413655461907 1.115877611797518 1.205273595450575 1.0 10.20383509082508 -2.000000000000741 0.15133469794116808 0.9380910364237444 3.294902909185803 0.627126640466455 0.11131420373249504 19.556651463607423 0.1841547772341759 0.15670745374598408 10.228700224293028 0.009999999999982934 2.000000000000741 2.3568118727620586 (ac)MVPSS(ph)PAVEK ddPTM_A549_MK2206_60min_R1 2 MVPSSPAVEK 10 0 H3BTQ3;P41440-3;P41440;E9PIL5;C9J8K6;C9JKP4 H3BTQ3 SLC19A1 Folate transporter 1 1 MVPS(0.098)S(0.902)PAVEK;MVPS(0.035)S(0.965)PAVEK 83.397 0.00010519 4757700.0 2925.5 3194.7 2711.1 2685.1 4412.1 2831.44 3181.3 3147.3999999999996 4532.6 3777.0 4177.3 True False 3419.25287839207 3357.2965843330276 3095.5747465051763 3342.949620538717 3763.0859346735288 3131.061101442242 3759.3010305858 3593.553588508249 3505.973337074869 2923.7730767595754 3139.9611223850793 1.0889475204058718 1.0692159722611032 0.9858640364801117 1.0646468189387803 1.1984498495367137 0.9971655633315367 1.1972444511447573 1.1444579879952863 1.1165658428317644 0.9311494514743259 1.0 11.616530981075334 -4.378901568061044 3.5063945827537073 1.072880173623247 3.5585832838835354 0.0032280724765046953 0.08369518203970665 5921.170386036111 446.45735741576397 0.010609607907728736 116481.26354110101 4.179250777608099e-05 4.378901568061044 2.4857031102602885 (ac)S(ph)AADEVDGLGVAR ddPTM_A549_MK2206_60min_R1 2 SAADEVDGLGVAR 13 0 P46940;H0YLE8;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(1)AADEVDGLGVAR;S(1)AADEVDGLGVAR 62.303000000000004 5.6548e-05 1576690.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)AADEVDGLGVAR ddPTM_A549_PD325901_60min_R1 2 SAADEVDGLGVAR 13 0 P46940;H0YLE8;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(1)AADEVDGLGVAR;S(1)AADEVDGLGVAR 102.06 9.367299999999998e-07 2426300.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)AADEVDGLGVARPHYGSVLDNER ddPTM_A549_MK2206_60min_R1 2 SAADEVDGLGVARPHYGSVLDNER 24 1 P46940;H0YLE8;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(1)AADEVDGLGVARPHYGSVLDNER;S(1)AADEVDGLGVARPHYGSVLDNER 98.74 8.2904e-24 8254500.0 1412.06 1929.0700000000002 1449.6 1091.96 1870.58 1234.5300000000002 1322.77 1282.35 2111.34 1999.2799999999997 2324.13 True False 1650.381206447551 2027.2514232758372 1655.1750774718391 1359.490249019948 1595.420159942343 1365.1671451853094 1563.1001867877853 1464.1270395321696 1633.1248611171643 1547.6412594397366 1746.9843782751607 0.9447028988759543 1.1604290504746189 0.9474469823857458 0.7781925619519305 0.9132423734192399 0.7814421022660611 0.8947419371494733 0.8380882266261231 0.9348251085848789 0.8858930158080519 1.0 10.770650992238041 -5.97227407519791 23.611421401322474 0.9240884090772626 1.0529093179936024 0.2897467747104938 0.08560708699024171 126.94903443109649 108107.09048020109 0.012938631854230885 0.04022600540477363 1.065923224536086e-06 5.97227407519791 0.1288209089163398 (ac)S(ph)ADAAAGAPLPR ddPTM_A549_PD325901_60min_R1 1 SADAAAGAPLPR 12 0 J3QRP6;O14745 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 S(1)ADAAAGAPLPR 46.891000000000005 0.0015693 913250.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)ANNSPPSAQK ddPTM_A549_PD325901_60min_R1 1 SANNSPPSAQK 11 0 O94806;O94806-2 O94806 PRKD3 Serine/threonine-protein kinase D3 1 S(0.5)ANNS(0.5)PPS(0.001)AQK 46.891000000000005 0.010595 2729800.0 594.7 567.61 616.55 538.72 502.36 466.02 453.25 486.29 679.87 463.9 796.47 True False 655.073506204999 615.4444867274685 658.3927906163374 571.9955108781103 467.0759666479166 462.2248876284384 470.49867677791696 476.59056446287474 651.297428211611 434.60927483033043 698.5092392393178 0.9378165232551245 0.8810828148782864 0.9425684781683524 0.818880379450697 0.6686754310602477 0.6617305279051212 0.6735754523308722 0.6822967223481334 0.932410613381262 0.6221954562886289 1.0 9.448135388181962 -8.91046984139326 5.983842754585627 0.970677376128598 0.78177825366563 0.0 0.14546043421623128 0.16706980337896532 8.917528861031737 0.020000687576122 0.021142006173044715 1.22893852449635e-09 8.91046984139326 -0.18889912246296792 (ac)S(ph)DAAVDTSSEITTK ddPTM_A549_MK2206_60min_R1 4 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 S(1)DAAVDTSSEITTK;S(0.979)DAAVDT(0.019)S(0.002)SEITTK;S(1)DAAVDTSSEITTK;S(0.999)DAAVDTSSEITTK 152.62 2.3126e-47 474635300.0 16392.800000000003 19588.9 18192.760000000002 18075.079999999998 22784.8 18120.780000000002 17262.04 17716.36 26210.9 24488.5 25459.5 True False 19159.503874519094 20585.891339043195 20772.76693048191 22503.47541142117 19433.186102842054 20038.308911999746 20398.32922453504 20227.70828407701 20274.17300020644 18956.5308419981 19137.20350354605 1.0011652889080116 1.075700079963549 1.0854651217265259 1.1759019758164437 1.0154663453958233 1.0470865771107427 1.0658991644602256 1.0569834971096426 1.0594114754775803 0.9905590876161989 1.0 14.224092405489934 -10.76676263319651 0.3756776392479731 0.9759140631174231 1.072691419997161 0.28548459010585636 0.04243936502559454 2.8315222214160563 0.49168480176978807 0.11081630928700557 0.014430710944381324 1.7109501918396487e-11 10.76676263319651 0.09677735687973799 (ac)S(ph)DAAVDTSSEITTK ddPTM_A549_PD325901_60min_R1 4 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 S(1)DAAVDTSSEITTK;S(0.93)DAAVDT(0.032)S(0.032)S(0.006)EITTK;S(1)DAAVDTSSEITTK;S(0.835)DAAVDT(0.143)S(0.019)S(0.004)EITTK 152.62 6.360399999999999e-39 543188100.0 18235.61 18329.2 17642.7 18452.4 20838.6 18494.7 19212.4 19644.09 19690.6 18651.7 19689.25 True False 20086.875702853446 19873.866010332986 18840.039716173636 19592.162839559012 19374.968625267273 18344.085295098233 19943.53839542868 19252.273214459514 18863.07255790599 17474.02847888097 17267.59707043924 1.1632698875769223 1.1509340836053832 1.0910632000109788 1.1346201072237925 1.1220419694895294 1.0623415186414014 1.1549689464071664 1.1149364405437676 1.0923970764987376 1.0119548427959977 1.0 14.075779713385632 -12.828559566548522 0.1830313240821007 0.7778327091290118 1.1518306728409478 0.7389331300027586 0.027051706085254593 8.039846618618636 0.18359922637471857 0.7262188512439871 0.03442895633248814 1.4840223219863064e-13 12.828559566548522 0.37399796371193594 (ac)S(ph)DEREVAEAATGEDASSPPPK ddPTM_A549_MK2206_60min_R1 2 SDEREVAEAATGEDASSPPPK 21 1 K7ERT7;Q99536-3;Q99536 K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog 1 S(0.84)DEREVAEAAT(0.132)GEDAS(0.023)S(0.005)PPPK;S(0.841)DEREVAEAAT(0.132)GEDAS(0.023)S(0.004)PPPK 42.208999999999996 0.00068822 1845640.0 646.0799999999999 534.2 443.94 651.1700000000001 717.6 285.48 483.15000000000003 522.45 845.16 539.62 841.9300000000001 True False 755.1225088605541 561.3884982473171 506.8973674757507 810.7066792321326 612.041990598972 315.68930411371286 570.9321010051015 596.5088874360216 653.7326094431885 417.7194672176338 632.8555449140998 1.1931988507156877 0.8870721016176238 0.8009685173012967 1.281029590002523 0.9671116821486443 0.4988331170529014 0.9021523246392611 0.9425672133709254 1.0329886728446416 0.6600550008206575 1.0 9.305732418623625 -5.247706827835664 22.936611199348665 0.9660259739111052 1.1931993416008635 0.06638922491334664 0.20334966487264597 1262.8984554063898 2109219.4408462266 0.02485398824566908 0.6172994440876727 5.653184664443517e-06 5.247706827835664 0.22717336768975827 (ac)S(ph)DEREVAEAATGEDASSPPPK ddPTM_A549_PD325901_60min_R1 1 SDEREVAEAATGEDASSPPPK 21 1 K7ERT7;Q99536-3;Q99536 K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog 1 S(0.882)DEREVAEAAT(0.104)GEDAS(0.013)S(0.002)PPPK 47.666000000000004 0.00082907 1234600.0 455.42 450.14 412.2 563.88 307.62 224.31 416.72 509.33 559.04 486.2 624.11 True False 501.653903137516 488.07487756646765 440.17437075996133 598.7095869356042 286.01383243138804 222.48329372974348 432.57850763793357 499.17101358834475 535.5454929139676 455.5012490245889 547.348426559256 0.9165165711556255 0.8917078297540855 0.8041940917360214 1.0938363168397411 0.5225443584981679 0.4064747114161246 0.790316527183992 0.9119803572401508 0.9784361604554449 0.8321961422049986 1.0 9.096315694166204 -8.421893294997819 3.020986890917258 0.9889655464239464 0.7694647550642217 0.1297033047601437 0.18113029767852828 0.30004452110433855 5.285075923537938 0.0313348291277253 0.037915211939152725 3.785355784799828e-09 8.421893294997819 -0.21950079135972467 (ac)S(ph)DFDEFER ddPTM_A549_MK2206_60min_R1 3 SDFDEFER 8 0 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 S(1)DFDEFER;S(1)DFDEFER;S(1)DFDEFER 75.854 0.00075483 40139080.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DFDEFER ddPTM_A549_PD325901_60min_R1 3 SDFDEFER 8 0 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 S(1)DFDEFER;S(1)DFDEFER;S(1)DFDEFER 46.426 0.0012177 1265910.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DGEGPSADDSASAASSMEVTDR ddPTM_A549_PD325901_60min_R1 1 SDGEGPSADDSASAASSMEVTDR 23 0 G3V538;G3V3N9 G3V538 EML1 1 S(0.458)DGEGPS(0.458)ADDS(0.071)AS(0.012)AAS(0.001)SMEVTDR 53.403 0.00058545 908230.0 0.0 0.0 0.0 160.47 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 170.38186744618787 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DHGDVSLPPEDR ddPTM_A549_PD325901_60min_R1 1 SDHGDVSLPPEDR 13 0 C9JZ93;C9JEK5;F5H5B9;C9JK83;O95630-2;O95630 C9JZ93 STAMBP STAM-binding protein 1 S(1)DHGDVSLPPEDR 60.434 1.8997e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DKPDMAEIEK ddPTM_A549_MK2206_60min_R1 2 SDKPDMAEIEK 11 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEK;S(1)DKPDMAEIEK 52.79 0.0011654999999999999 2502500.0 1212.3 1486.2 1236.6 1388.5 1489.7 1567.2 1571.7 1830.4 2058.0 1536.6 1639.4 True False 1416.9066021106505 1561.841231926549 1411.9684746148428 1728.682562332134 1270.5671033936576 1733.0400637768341 1857.2575455856725 2089.864805364904 1591.8662859506874 1189.4809927849522 1232.291734861777 1.1498142542273735 1.2674281484990537 1.1458069827703743 1.4028192459848283 1.0310603142495098 1.4063553416360652 1.5071573500361066 1.695917246088905 1.291793364279314 0.9652592475744983 1.0 10.267128127232203 -10.27530533857196 1.0438992624027232 1.0257119191034012 1.3212505346561865 0.3437131551656051 0.1771608745027677 0.4513936268136428 0.9708210410329374 0.0775274244866415 0.03406604575203797 5.3051132752172167e-11 10.27530533857196 0.29553861555278527 (ac)S(ph)DKPDMAEIEK ddPTM_A549_PD325901_60min_R1 4 SDKPDMAEIEK 11 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEK;S(1)DKPDMAEIEK;S(1)DKPDMAEIEK;S(1)DKPDMAEIEK 102.06 1.1335000000000002e-11 141083000.0 54731.0 50975.5 53622.0 50407.0 55415.0 44623.5 49464.4 47654.9 52201.7 51439.0 53776.3 True False 60287.250829167344 55271.3842835328 57261.111375280525 53520.52590739696 51522.84157137171 44260.101010874256 51346.79480995829 46704.38563495418 50007.84408530167 48191.13276136532 47162.156016052475 1.2782971755711827 1.1719435444113329 1.2141326057229167 1.1348193218558604 1.0924615395834534 0.9384664474586265 1.0887287424366583 0.9902936926602235 1.0603383795321109 1.0218178478728286 1.0 15.525342052120058 -6.624242160301227 1.6510286981475484 1.0252370442431114 1.2214959920794983 0.7917261817090733 0.044826651096124735 0.12294140932763938 0.6688000592164701 0.006463391578158803 0.017548199972306385 2.3755153425042101e-07 6.624242160301227 0.19625894783638698 (ac)S(ph)DKPDMAEIEKFDK ddPTM_A549_MK2206_60min_R1 8 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK 107.61 1.0056000000000002e-19 407016900.0 69489.0 72064.9 77090.0 68674.1 78566.5 69294.5 68018.1 68802.7 87586.9 98667.0 94569.6 True False 81217.04435706278 75732.6955959249 88022.52119364253 85499.25758289732 67009.47192641307 76627.19799603379 80376.1083294527 78555.69342443165 67748.60699753842 76378.05617279239 71085.35833181912 1.1425284511889213 1.0653768564042752 1.2382651400976623 1.2027688906595309 0.9426620825855553 1.0779603534998858 1.13069850410355 1.1050896452929417 0.9530599350895146 1.0744555273431626 1.0 16.11726481369291 -8.751789488772555 21.91250907866486 0.9778338594143516 1.112459490673696 0.23303556383399704 0.07859732210590474 32.20489437322773 73128.49394076466 0.012736506475654857 0.014327723094369705 1.7709671735371144e-09 8.751789488772555 0.13462563125934435 (ac)S(ph)DKPDMAEIEKFDK ddPTM_A549_PD325901_60min_R1 10 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK 82.171 5.3203e-14 1067093600.0 36525.06 36673.0 39328.00000000001 36144.49999999999 41581.40000000001 38932.200000000004 42336.1 41794.600000000006 38727.799999999996 41178.8 41505.90000000001 True False 40233.05720287196 39763.5624139047 41997.03457847588 38377.06367488462 38660.865912042544 38615.14907112977 43947.223452702856 40960.97391577058 37100.20524555231 38578.76354038202 36400.937427578196 1.1052753045967014 1.092377428274111 1.1537349735025768 1.0542877845175842 1.0620843484858216 1.0608284236623542 1.207310211176249 1.1252725014916125 1.0192101596110086 1.0598288469118888 1.0 15.151687983948799 -8.811511382398521 6.297699345850854 1.0086622715043245 1.1071141289872681 0.3753382712427511 0.045219941496892256 0.11550878459835512 10.268097812233131 0.007643633876534906 0.008152651046086595 1.5434359709718843e-09 8.811511382398521 0.0984518574829436 (ac)S(ph)DNDDIEVES(ph)DADKR ddPTM_A549_PD325901_60min_R1 2 SDNDDIEVESDADKR 15 1 A0A494C130;Q6V3B1;G3V563;G3V2R5;P61244-2 A0A494C130 MAX Protein max 2 S(1)DNDDIEVES(1)DADKR;S(1)DNDDIEVES(1)DADKR 43.023999999999994 0.00016996 5495700.0 493.66 433.38 698.5 618.36 474.96 543.37 581.89 567.87 681.04 625.27 518.13 True False 543.7759997867156 469.9024535472424 745.9044104217203 656.5546928025469 441.60044812304824 538.9449748737491 604.0341423724254 556.5433873646033 652.418257180396 585.7903454907542 454.4032946966838 1.1966814636537537 1.034108817060634 1.6415030857547253 1.444872210358422 0.9718249257365497 1.1860498838009024 1.3292908511493537 1.224778503721234 1.4357692050095898 1.289141941371204 1.0 8.827829485060398 -11.016270191150063 1.3044353545051537 1.0001347209367624 1.2893528357072883 0.0 0.1991963853031179 0.5212000030190987 1.580630840097611 0.13249174469475333 0.030042894804053356 9.632295753417612e-12 11.016270191150063 0.28921811477052595 (ac)S(ph)DNDDIEVESDADKR ddPTM_A549_MK2206_60min_R1 2 SDNDDIEVESDADKR 15 1 A0A494C130;Q6V3B1;G3V563;G3V2R5;P61244-2 A0A494C130 MAX Protein max 1 S(1)DNDDIEVESDADKR;S(1)DNDDIEVESDADKR 227.2 4.038999999999999e-163 136367000.0 15077.5 17648.0 14911.400000000001 13170.0 17560.4 13823.8 14256.5 14218.2 21011.8 21037.4 21554.1 True False 17622.213390516656 18546.207819297368 17026.06074104137 16396.65059122376 14977.288422121212 15286.625340504213 16846.72151087494 16233.673391411314 16252.660848949778 16285.03672889115 16201.622107102725 1.0876820403551537 1.1447130229735938 1.050886178463403 1.012037589991408 0.9244314132938102 0.9435243730195768 1.0398169639748236 1.0019782762551002 1.0031502241880261 1.0051485352045 1.0 13.983850642580228 -6.039207304674526 2.8502168032874446 0.9952206993716233 1.1156887325383769 0.6797008930194617 0.033154928063208876 0.11542466478011014 1.8523004844384172 0.004717364343667788 0.015937524587243367 9.136770058387672e-07 6.039207304674526 0.12046803316675359 (ac)S(ph)DNDDIEVESDADKR ddPTM_A549_PD325901_60min_R1 3 SDNDDIEVESDADKR 15 1 A0A494C130;Q6V3B1;G3V563;G3V2R5;P61244-2 A0A494C130 MAX Protein max 1 S(1)DNDDIEVESDADKR;S(1)DNDDIEVESDADKR;S(1)DNDDIEVESDADKR 241.54 4.378799999999998e-209 222622000.0 15687.4 17967.9 15398.7 17210.5 18855.4 18665.5 16157.2 17468.4 18613.7 18117.7 18770.6 True False 17279.973299546506 19482.11799135053 16443.74838190542 18273.55349711855 17531.06175159871 18513.494356526808 16772.071087559092 17119.979058305304 17831.430919885384 16973.74533001398 16461.93519663709 1.049692705817268 1.1834646266455 0.9988952201236109 1.1100489267417082 1.064945375023711 1.1246244220611936 1.0188395767093872 1.039973663716198 1.0831916604512002 1.0310905204803287 1.0 14.00684632250723 -14.999999998735055 0.19771360501954108 0.6441996710997235 1.091541967731374 0.18416648324853668 0.04922866303382911 45.623239887351964 0.5336864928798054 6.301542097324802 0.039883325711750045 1.0000000029126445e-15 14.999999998735055 0.4473422966316505 (ac)S(ph)DNDDIEVESDEEQPR ddPTM_A549_PD325901_60min_R1 1 SDNDDIEVESDEEQPR 16 0 G3V5L1;P61244-6;P61244-5;P61244-3;P61244-4;P61244 G3V5L1 MAX Protein max 1 S(1)DNDDIEVESDEEQPR 43.628 0.00030316 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DNGELEDKPPAPPVR ddPTM_A549_MK2206_60min_R1 4 SDNGELEDKPPAPPVR 16 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR 98.353 1.9566999999999998e-10 46619800.0 8352.8 9425.4 8172.299999999999 7967.710000000001 12166.2 10520.5 8628.1 9443.7 14256.0 13591.8 13836.199999999999 True False 9762.548433646656 9905.11260086159 9331.255025954133 9919.799307684092 10376.56809646769 11633.7723270573 10195.714086064614 10782.373395118302 11027.038762154032 10521.402940084941 10400.289680306521 0.9386804342702626 0.952388145458816 0.8972110693823596 0.9538002894734497 0.9977191420077703 1.11860079715726 0.9803298176752441 1.036737795441917 1.060262656244498 1.011645181384491 1.0 13.344336092004415 -6.802015633280658 3.2919120872992114 1.0321277574338614 0.9319057797635728 0.6171909840361295 0.03638931922313736 0.12525611136680778 2.790055332159769 0.005420730374929357 0.011179324435019112 1.5775544815132657e-07 6.802015633280658 -0.10022197767028862 (ac)S(ph)DNGELEDKPPAPPVR ddPTM_A549_PD325901_60min_R1 4 SDNGELEDKPPAPPVR 16 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR 107.18 2.7307e-15 66120900.0 15319.7 16422.9 15658.2 15887.499999999998 18856.6 17260.4 16372.6 17428.6 16246.6 15819.199999999999 17174.5 True False 16874.944666232936 17806.915419172572 16720.859612405686 16868.83479186957 17532.177467738482 17119.837025067387 16995.668252430485 17080.9729005278 15563.811901073392 14820.373012278445 15062.145378125557 1.120354653510387 1.182229687215288 1.1101246995457263 1.1199490091476496 1.1639893937818515 1.1366134501616332 1.1283696861081254 1.134033198573036 1.0333064454202119 0.9839483446894469 1.0 13.878639654602106 -8.81152710468771 2.9388040366510064 1.0135291972577585 1.1386478906283395 0.8749720785425887 0.02210132524518827 0.05777135606397485 0.9746144370676721 0.0037901247466678133 0.004052805420823012 1.543380096655139e-09 8.81152710468771 0.125118693370581 (ac)S(ph)DQDHSMDEMTAVVK ddPTM_A549_MK2206_60min_R1 8 SDQDHSMDEMTAVVK 15 0 P08047;H3BUU5;P08047-3 P08047 SP1 Transcription factor Sp1 1 S(0.955)DQDHS(0.044)MDEMTAVVK;S(0.85)DQDHS(0.149)MDEMT(0.001)AVVK;S(0.955)DQDHS(0.044)MDEMTAVVK;S(0.844)DQDHS(0.154)MDEMT(0.002)AVVK;S(0.489)DQDHS(0.489)MDEMT(0.023)AVVK;S(0.495)DQDHS(0.495)MDEMT(0.009)AVVK;S(0.91)DQDHS(0.09)MDEMTAVVK;S(0.498)DQDHS(0.498)MDEMT(0.005)AVVK 64.199 1.211e-06 32036700.0 5530.8099999999995 6585.540000000001 6082.05 5993.400000000001 6857.209999999999 5238.46 5409.04 5350.09 8897.94 7590.58 8720.01 True False 6464.27551267806 6920.715856884386 6944.576145100443 7461.783269053948 5848.523492691158 5792.790360191678 6391.792552252168 6108.481641463463 6882.570797090402 5875.862706113238 6554.590856967203 0.9862210554007133 1.0558577961472624 1.059498036817768 1.138405650616994 0.8922789568893487 0.8837760413427226 0.9751627053057037 0.9319394260849176 1.0500382018161474 0.896449959171363 1.0 12.678290013690875 -6.747894277278251 24.999995053377642 0.9950199373744443 1.0596644917204632 0.2405266599807363 0.06854386976928113 348.376043919896 642988.7275546475 0.01005705651265793 0.02084690366632158 1.7869225223994922e-07 6.747894277278251 0.0646445543460189 (ac)S(ph)DQDHSMDEMTAVVK ddPTM_A549_PD325901_60min_R1 4 SDQDHSMDEMTAVVK 15 0 P08047;H3BUU5;P08047-3 P08047 SP1 Transcription factor Sp1 1 S(0.933)DQDHS(0.066)MDEMT(0.001)AVVK;S(0.968)DQDHS(0.031)MDEMT(0.001)AVVK;S(0.495)DQDHS(0.495)MDEMT(0.009)AVVK;S(0.895)DQDHS(0.105)MDEMTAVVK 67.153 1.1896e-06 24540000.0 7304.21 8966.98 8324.69 8726.11 9512.43 7712.150000000001 7891.9 8236.14 8605.9 8934.37 10261.9 True False 8045.728022124795 9722.65887421905 8889.653523827616 9265.101996266303 8844.309732901987 7649.344807355183 8192.230573113387 8071.863726573166 8244.223950823394 8370.25235345088 8999.751355543787 0.8939944787662027 1.0803252767900033 0.9877665696121313 1.0294842190900153 0.9827282314254105 0.8499506825422724 0.9102729897162134 0.89689852615772 0.9160501912916746 0.9300537340173137 1.0 13.135669427984489 -7.011942872957587 24.589838258582965 0.9420024095816651 1.0034385049389623 0.2708392795254565 0.05600990589767082 617.7443625955023 1271911.778243386 0.00888187026683652 0.015962455521378063 9.728751872423854e-08 7.011942872957587 0.061436095357297105 (ac)S(ph)DQEAKPSTEDLGDK ddPTM_A549_MK2206_60min_R1 2 SDQEAKPSTEDLGDK 15 1 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(1)DQEAKPSTEDLGDK;S(1)DQEAKPSTEDLGDK 102.66 7.4008e-14 95997000.0 6852.0 6519.6 6296.0 4792.9 8303.5 6305.4 6812.799999999999 7856.2 9390.599999999999 10066.2 9594.4 True False 8008.450084683812 6851.419792536898 7188.867472242482 5967.160715161457 7082.066149579941 6972.633242814227 8050.597573688408 8969.840408603455 7263.644093706764 7792.238428720475 7211.845688030882 1.110457770605798 0.9500230716122832 0.9968138231484159 0.8274110364098385 0.9820046706398157 0.9668306206809634 1.1163019734392763 1.243764883029905 1.0071824062683217 1.080477698192134 1.0 12.816152812395412 -7.600819553249082 24.999999498677834 1.0333998078028181 0.966153701702227 0.18217183084027833 0.09374537618828303 63.25062296140628 20285.065234496313 0.015071753797699775 0.022355025617209433 2.507150742738323e-08 7.600819553249082 -0.06724610610059112 (ac)S(ph)DQEAKPSTEDLGDK ddPTM_A549_PD325901_60min_R1 2 SDQEAKPSTEDLGDK 15 1 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(1)DQEAKPSTEDLGDK;S(1)DQEAKPSTEDLGDK 118.88 5.5921999999999996e-39 108060000.0 20916.9 21250.7 22420.7 21575.5 25243.0 22022.0 20967.4 19740.8 22902.9 23174.0 22748.1 True False 23040.368289792073 23041.571068338144 23942.3035286217 22908.169633484296 23470.018763622404 21842.66013337083 21765.32588080152 19347.05425764198 21940.370759980153 21710.789685100423 19950.227912086983 1.1548924850042894 1.1549527739669705 1.200101754933641 1.1482660616425953 1.1764286035751468 1.0948576742893903 1.0909813149359986 0.9697660770040845 1.099755394106923 1.0882477022704484 1.0 14.284117607488774 -7.572869649322252 1.7773747735852201 1.0428200337229803 1.1680096078693554 0.6843793418115464 0.03820642461246108 0.16692393442917497 1.0621672713695447 0.006943769332995582 0.01150616180182109 2.6738088146481473e-08 7.572869649322252 0.1251895741463751 (ac)S(ph)DQEAKPSTEDLGDKK ddPTM_A549_MK2206_60min_R1 4 SDQEAKPSTEDLGDKK 16 2 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK 125.89 1.2768e-21 4805861000.0 66599.9 75057.3 72535.7 63208.2 92931.20000000001 68795.4 68352.0 69179.2 101601.5 100071.9 103918.59999999999 True False 77840.33490877615 78877.39597435125 82822.35297114657 78694.21183752388 79261.14358521643 76075.28356530928 80770.67363738117 78985.56345241467 78588.922474256 77465.58828704685 78112.74361254535 0.9965126214856771 1.0097890859601442 1.0602924585770768 1.0074439611014399 1.0147018260985348 0.9739164193573551 1.0340268425088188 1.011173846923092 1.006096045788285 0.9917151120858265 1.0 16.253270313919636 -6.4927602510194475 24.987364704193922 1.0046749684338805 1.0231089988385522 0.12999254603695443 0.020021860466751484 975.9685179740458 809697.2854523301 0.0026029269867152986 0.00604357494115079 3.215435105382024e-07 6.4927602510194475 0.01843403040467173 (ac)S(ph)DQEAKPSTEDLGDKK ddPTM_A549_PD325901_60min_R1 6 SDQEAKPSTEDLGDKK 16 2 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(0.999)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(0.999)DQEAKPSTEDLGDKK 137.52 1.0988999999999999e-54 8694232000.0 224064.7 217378.90000000002 228083.7 220699.09999999998 255971.1 209521.5 239615.3 239107.9 235907.30000000002 229703.19999999998 253013.9 True False 246811.58339628548 235698.18279431586 243562.83146070736 234331.18216297735 237992.5729883563 207815.226370632 248733.99136402336 234338.70535798138 225992.93657073425 215199.7007506067 221894.7942872585 1.1122910034417952 1.062206905535548 1.0976500473706383 1.0560463255375836 1.0725468966174037 0.936548453235007 1.1209546044690875 1.0560802298706178 1.0184688527580796 0.9698276223281537 1.0 17.759516296347346 -2.0000000004884937 0.12740034930009622 0.9803968048495917 1.3769628586212368 0.3622693375639594 0.04472643760116841 63.29834795838301 0.5268922483421955 0.12374328616620972 4.525744526566624 0.009999999988752017 2.0000000004884937 0.3965660537716451 (ac)S(ph)DQEAKPSTEDLGDKKEGEYIK ddPTM_A549_MK2206_60min_R1 5 SDQEAKPSTEDLGDKKEGEYIK 22 3 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.998)DQEAKPS(0.001)TEDLGDKKEGEYIK;S(1)DQEAKPSTEDLGDKKEGEYIK;S(1)DQEAKPSTEDLGDKKEGEYIK;S(0.998)DQEAKPS(0.001)T(0.001)EDLGDKKEGEYIK;S(0.811)DQEAKPS(0.087)T(0.102)EDLGDKKEGEYIK 109.05 1.0225e-40 502711000.0 27739.0 36642.7 36566.3 29014.699999999997 44201.4 26442.8 23780.5 16703.5 53397.799999999996 55508.799999999996 59267.8 True False 32420.665046562193 38507.65691637396 41751.9511833323 36123.30280251939 37699.432613240504 29240.959544689962 28101.10903022212 19071.27227732336 41303.2835587646 42969.32352746408 44549.969551934104 0.7277370865263515 0.864369994046431 0.9371937086210571 0.8108491019372902 0.8462280219808548 0.6563631768727098 0.630777289251865 0.4280872123849835 0.927122599053975 0.9645197058411592 1.0 15.443136825274454 -8.973879880169283 24.999568379588656 0.967848414679152 0.7439314752170811 0.3748256677549767 0.13084863494682394 146.2997046354069 140024.80692790938 0.024818021203025124 0.025847078430934162 1.061989248079347e-09 8.973879880169283 -0.2239169394620708 (ac)S(ph)DQEAKPSTEDLGDKKEGEYIK ddPTM_A549_PD325901_60min_R1 4 SDQEAKPSTEDLGDKKEGEYIK 22 3 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.728)DQEAKPS(0.136)T(0.136)EDLGDKKEGEYIK;S(1)DQEAKPSTEDLGDKKEGEYIK;S(1)DQEAKPSTEDLGDKKEGEYIK;S(0.755)DQEAKPS(0.123)T(0.123)EDLGDKKEGEYIK 133.38 1.5299999999999998e-88 1118496000.0 52055.399999999994 50741.200000000004 60309.7 68838.8 58833.5 98790.59999999999 81636.3 89669.1 79905.6 78859.6 81381.9 True False 57340.025886839954 55017.33900025691 64402.67891368761 73090.8163317419 54701.23792455652 97986.08210751912 84743.01406959743 87880.5794564518 76547.4455112091 73880.3913977364 71372.44222236902 0.803391674733373 0.7708484855939788 0.9023465767506412 1.024076156789186 0.766419590268868 1.3728839739325756 1.1873352155383847 1.2312956754744329 1.0725070227065616 1.0351389009157566 1.0 16.123079519020038 -6.386139956914781 1.1624241416706347 1.0767844568133196 0.7875744505260512 0.4380941961426379 0.14068445561892767 0.4513825180103037 1.1036518185667106 0.022497645233549777 0.09554739859594254 4.110172442303018e-07 6.386139956914781 -0.28921000628726834 (ac)S(ph)DSGEQNYGER ddPTM_A549_MK2206_60min_R1 2 SDSGEQNYGER 11 0 P62995;P62995-2 P62995 TRA2B Transformer-2 protein homolog beta 1 S(1)DSGEQNYGER;S(0.998)DS(0.002)GEQNYGER 123.21 1.2195999999999999e-19 43211000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DSGEQNYGER ddPTM_A549_PD325901_60min_R1 4 SDSGEQNYGER 11 0 P62995;P62995-2 P62995 TRA2B Transformer-2 protein homolog beta 1 S(0.998)DS(0.002)GEQNYGER;S(0.999)DS(0.001)GEQNYGER;S(0.91)DS(0.09)GEQNYGER;S(1)DSGEQNYGER 130.75 1.6906e-24 109282160.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DSGEQNYGERESR ddPTM_A549_MK2206_60min_R1 2 SDSGEQNYGERESR 14 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 S(0.981)DS(0.018)GEQNYGERESR;S(0.802)DS(0.197)GEQNYGERESR 66.19 1.3125e-06 100487000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DSGEQNYGERESR ddPTM_A549_PD325901_60min_R1 2 SDSGEQNYGERESR 14 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 S(0.498)DS(0.498)GEQNYGERES(0.004)R;S(0.978)DS(0.022)GEQNYGERESR 123.96 5.055e-32 223785000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DTSESGAGLTR ddPTM_A549_PD325901_60min_R1 2 SDTSESGAGLTR 12 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 S(0.994)DT(0.006)SESGAGLTR;S(0.994)DT(0.006)S(0.001)ESGAGLTR 94.29700000000001 1.4824e-08 2381500.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DVEENNFEGR ddPTM_A549_MK2206_60min_R1 1 SDVEENNFEGR 11 0 Q13595;F8WEH2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 S(1)DVEENNFEGR 46.158 0.0060208 4370900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)DVEENNFEGR ddPTM_A549_PD325901_60min_R1 5 SDVEENNFEGR 11 0 Q13595;F8WEH2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 S(1)DVEENNFEGR;S(1)DVEENNFEGR;S(1)DVEENNFEGR;S(1)DVEENNFEGR;S(1)DVEENNFEGR 120.12 9.466100000000001e-14 31343600.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)EASSEDLVPPLEAGAAPYREEEEAAKK ddPTM_A549_PD325901_60min_R1 1 SEASSEDLVPPLEAGAAPYREEEEAAKK 28 2 Q03169;H0YKI8;H0YL88;H0YKY9 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 1 S(0.333)EAS(0.333)S(0.333)EDLVPPLEAGAAPYREEEEAAKK 51.586000000000006 1.7059000000000002e-15 6268800.0 1311.8 1447.1 1085.4 1423.6 1632.3 1469.2 1575.6 1579.7 1388.1 1827.1 1718.4 True False 1444.9729703038804 1569.0521955978907 1159.061771040422 1511.5325387698203 1517.6528791292974 1457.2353223117082 1635.5603202014024 1548.1916442493234 1329.7629842477784 1711.7365941851638 1507.047693835103 0.958810378871782 1.0411430255435379 0.7690942866518485 1.0029759144007608 1.0070370601657646 0.9669470503639912 1.085274425548712 1.0273010274210488 0.8823629070847955 1.1358211164698928 1.0 10.557509359574325 (ac)S(ph)EEKPK ddPTM_A549_PD325901_60min_R1 1 SEEKPK 6 1 A8MUA9;A8MU27;P55854;P55854-2 A8MUA9 SUMO3 Small ubiquitin-related modifier 3 1 S(1)EEKPK 56.51 0.035117 10867000.0 9426.4 9047.1 6549.4 7910.0 8261.5 7282.0 6641.1 7000.4 8231.9 9233.3 10653.0 True False 10383.361188651092 9809.530867800211 6993.8816687416065 8398.58273508659 7681.240740627763 7222.697806339409 6893.83069464936 6860.771530292435 7885.941870203367 8650.307862235166 9342.748534930957 1.1113818540474958 1.0499619925682506 0.7485893088733647 0.8989413237106519 0.8221607069813452 0.773080617479424 0.7378803645281142 0.7343418807261236 0.844070868515744 0.925884693341914 1.0 13.189631322218403 -5.612374897669845 6.691966113709074 0.8719329417322063 1.0962559905362994 0.508134573537149 0.08819060573884678 0.15828699547190198 9.571695793709402 0.015317717808659549 0.060712404271940586 2.4413222110139905e-06 5.612374897669845 0.22432304880409315 (ac)S(ph)EETVPEAASPPPPQGQPYFDR ddPTM_A549_PD325901_60min_R1 1 SEETVPEAASPPPPQGQPYFDR 22 0 P35612-2;P35612-8;P35612-4;P35612-3;C9J299;C9J080;A0A1C7CYY0;C9JTM0;P35612-7;P35612-5;P35612-6;P35612 P35612-2;P35612 ADD2 Beta-adducin 1 S(0.493)EET(0.493)VPEAAS(0.014)PPPPQGQPYFDR 129.17 9.765999999999999e-41 12256000.0 656.15 564.64 404.51 1054.3 995.24 659.58 474.18 752.52 439.76 474.83 903.65 True False 722.7618649678997 612.2241944042526 431.96248111623464 1119.4217165109724 925.3377757916089 654.2085991630524 492.22517938125196 737.51039825948 421.27841650659406 444.84915276500533 792.5067787093175 0.9119945524566933 0.7725160350064456 0.5450584054558272 1.4125074341118835 1.167608657302113 0.8254927487541514 0.6210990146770651 0.930604529920356 0.5315770512306421 0.5613190507840072 1.0 9.630279465176285 -7.505975415740173 24.17230954357152 0.7739281233465015 0.9576119377903207 0.1600728488008718 0.24504540897099414 936.8655880948659 1339748.4383533674 0.0406027122682778 0.06393105429428332 3.119066141166024e-08 7.505975415740173 0.1836838144438192 (ac)S(ph)EGESQTVLSSGSDPK ddPTM_A549_MK2206_60min_R1 2 SEGESQTVLSSGSDPK 16 0 Q9UHY1;F8W6G1;C9JDW7;C9JHZ6 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 S(0.838)EGES(0.138)QT(0.024)VLSSGSDPK;S(0.479)EGES(0.479)QT(0.042)VLSSGSDPK 66.498 1.1779000000000001e-10 73752000.0 2075.54 2066.61 2008.69 2000.1100000000001 3833.5 2692.5 2608.12 3110.2 3538.2 3533.5 3330.7 True False 2425.8404099189465 2171.791621794999 2293.5524464451637 2490.1370397883493 3269.5972282067446 2977.418562863148 3081.981643947896 3551.080374588028 2736.8033493443736 2735.2798958776707 2503.59526735642 0.968942720713969 0.8674691353320152 0.9161035237404632 0.994624439603498 1.305960780018232 1.1892571461868293 1.2310223158402922 1.4183923499494635 1.093149274177292 1.0925407678877304 1.0 11.289785638876506 -6.5312431317337305 24.895170106199753 1.1157378162677474 0.9196452395246076 0.4372771141856797 0.12287793983031768 184.36303290884894 548724.5347020088 0.021269759746933608 0.04433377489755449 2.942773715123469e-07 6.5312431317337305 -0.19609257674313973 (ac)S(ph)EGESQTVLSSGSDPK ddPTM_A549_PD325901_60min_R1 2 SEGESQTVLSSGSDPK 16 0 Q9UHY1;F8W6G1;C9JDW7;C9JHZ6 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 S(0.907)EGES(0.093)QTVLSSGSDPK;S(0.5)EGES(0.5)QTVLSSGSDPK 108.37 1.4515e-21 132682000.0 1716.9099999999999 1891.27 1794.33 1636.62 1753.87 1877.6100000000001 1771.02 1685.38 2221.5 2024.6 2443.9 True False 1891.2094392776617 2050.6539603126416 1916.1040239828264 1737.710300366299 1630.68422172303 1862.3193666796114 1838.4171352393303 1651.7637737449672 2128.138080474346 1896.7664104796015 2143.315793158525 0.8823755441519219 0.9567670647780133 0.8939905309796345 0.8107579414629795 0.7608231259845993 0.8688963953068158 0.8577444075705349 0.7706581452053896 0.9929185830979148 0.8849682424466285 1.0 11.065628715011997 -8.78558403185416 24.17687336462504 0.9966560539478939 0.8518339810179683 0.33521114696193177 0.06259975844895026 78.72227750243665 78826.88679935418 0.009697477733631086 0.010326707541138576 1.638385018685441e-09 8.78558403185416 -0.14482207292992566 (ac)S(ph)EKS(ph)VEAAAELSAK ddPTM_A549_PD325901_60min_R1 2 SEKSVEAAAELSAK 14 1 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 2 S(1)EKS(1)VEAAAELSAK;S(1)EKS(1)VEAAAELSAK 92.06299999999999 8.114e-05 13685300.0 8978.7 9566.2 9971.5 9196.400000000001 10835.9 9595.7 11428.0 12519.1 10104.5 10520.3 11677.3 True False 9890.211014230412 10372.377246581818 10648.225953500614 9764.440741460221 10074.823765825617 9517.555800644199 11862.898793641545 12269.396729456037 9679.84300434528 9856.046462594368 10241.066128503628 0.9657403721574757 1.0128220164219737 1.0397575623365767 0.9534593975800204 0.9837670843453189 0.9293520499935347 1.1583656081102653 1.1980585395603514 0.9451987598638473 0.9624043374900542 1.0 13.32207829198129 (ac)S(ph)EKSVEAAAELSAK ddPTM_A549_MK2206_60min_R1 3 SEKSVEAAAELSAK 14 1 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 S(0.562)EKS(0.438)VEAAAELSAK;S(0.999)EKS(0.001)VEAAAELSAK;S(0.99)EKS(0.01)VEAAAELSAK 97.911 1.737e-26 55879000.0 19713.9 22128.1 22095.2 21773.1 21843.7 11337.3 12811.5 12349.7 24811.399999999998 33094.0 32133.6 True False 23041.124361419752 23254.32577324309 25228.63160303242 27107.51047743161 18630.520666174423 12537.005560909336 15139.183715257914 14100.307794370061 19191.657515664177 25618.04241521879 24153.940277756727 0.9539281829987067 0.9627549586457292 1.0444934165157878 1.1222810922652986 0.7713242829920881 0.5190459782851503 0.6267790489322163 0.5837684300045646 0.7945559728545699 1.0606154573798607 1.0 14.55997093736755 -6.771662464414661 24.955678284742845 0.8179683422926997 1.0184015299936873 0.3330026247738329 0.16354583602235423 250.7172031893168 612029.2092537383 0.027496842282079253 0.05238277747261361 1.6917552604702955e-07 6.771662464414661 0.20043318770098761 (ac)S(ph)EKSVEAAAELSAK ddPTM_A549_PD325901_60min_R1 2 SEKSVEAAAELSAK 14 1 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 S(0.997)EKS(0.003)VEAAAELSAK;S(1)EKSVEAAAELSAK 109.24 3.0357e-32 92368000.0 27746.0 32151.0 28935.0 32426.0 36371.0 39935.0 36875.0 40576.0 37623.0 37054.0 35315.0 True False 30562.753494474353 34860.47760394431 30898.703100289877 34428.880375210865 33816.42643313832 39609.78260040705 38278.29830377427 39766.67984874379 36041.83614750682 34714.404116324804 30971.478880229646 0.9868031685753244 1.1255670979985772 0.9976502323243522 1.1116317857584843 1.0918570134771548 1.2789115674321767 1.2359209081297329 1.2839774297677622 1.1637105314500753 1.1208507107642323 1.0 14.918652652527598 -5.258101893648654 22.751574384530407 1.1144263547974007 0.9868030078768478 0.1265830781677857 0.09553934848177557 177.78423239216286 1211725.3990145652 0.01551411108966512 0.15194497334783627 5.519479267300336e-06 5.258101893648654 -0.12762334692055288 (ac)S(ph)ELDQLRQEAEQLK ddPTM_A549_PD325901_60min_R1 2 SELDQLRQEAEQLK 14 1 P62873-2;P62873;F6X3N5;F6UT28;B1AKQ8 P62873-2 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 1 S(1)ELDQLRQEAEQLK;S(1)ELDQLRQEAEQLK 56.093999999999994 0.00035912 1908740.0 2613.0 2192.0 2300.0 2682.3 2689.6 2551.6000000000004 3021.4 2665.0 2205.33 3142.2 3175.6 True False 2878.2698364110684 2376.72753282467 2456.091831023559 2847.979579054711 2500.6917746162853 2530.8206155802845 3136.3810303735213 2611.844484347944 2112.6476493416585 2943.8009557487944 2785.021331786982 1.0334821509479262 0.8533965272358133 0.8818933639720566 1.0226060197633504 0.8979075837138168 0.9087257561350196 1.1261605053348345 0.9378184843819776 0.7585750332425995 1.057011995617259 1.0 11.443472662548913 -8.540645955074519 24.98702385597455 0.8840044516782777 0.9571794473407724 0.0 0.10447977458955322 474.95634377727913 667954.7910267845 0.018724184807459757 0.021233023114397717 2.879745079742408e-09 8.540645955074519 0.07317499566249475 (ac)S(ph)ELSDEASEPELLNR ddPTM_A549_MK2206_60min_R1 1 SELSDEASEPELLNR 15 0 K7ELU8;F6WF08;Q6ZW76;K7EPP4;K7ELP3;K7ERY3;K7EJX3;K7EM53;K7EPY5;K7EKD2;K7ERR7;K7EJS9 K7ELU8 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 S(0.495)ELS(0.495)DEAS(0.01)EPELLNR 40.589 0.0033079 303900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)ELSDEASEPELLNR ddPTM_A549_PD325901_60min_R1 2 SELSDEASEPELLNR 15 0 K7ELU8;F6WF08;Q6ZW76;K7EPP4;K7ELP3;K7ERY3;K7EJX3;K7EM53;K7EPY5;K7EKD2;K7ERR7;K7EJS9 K7ELU8 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 S(0.491)ELS(0.491)DEAS(0.019)EPELLNR;S(0.496)ELS(0.496)DEAS(0.009)EPELLNR 59.542 1.1723e-05 1338380.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)ES(ph)GHSQPGLYGIER ddPTM_A549_PD325901_60min_R1 2 SESGHSQPGLYGIER 15 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 2 S(0.99)ES(0.99)GHS(0.019)QPGLYGIER;S(0.914)ES(0.914)GHS(0.172)QPGLYGIER 68.069 0.00062175 2073530.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)ESGHSQPGLYGIER ddPTM_A549_MK2206_60min_R1 2 SESGHSQPGLYGIER 15 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 S(0.443)ES(0.443)GHS(0.114)QPGLYGIER;S(0.497)ES(0.497)GHS(0.006)QPGLYGIER 84.65799999999999 5.7773999999999995e-09 3794880.0 393.03 570.14 290.435 385.28 669.12 652.26 236.9 195.70600000000002 582.96 535.58 328.69 True False 459.3638553390654 599.1576907351656 331.62305023836467 479.6736172958767 570.6933343779045 721.2817202648531 279.94166351673096 223.4479248244886 450.92049079582733 414.5921060235354 247.0672016174925 1.8592668404859702 2.4250798439154093 1.3422382577181609 1.9414702322103587 2.309870879832312 2.9193746298285914 1.1330587859659917 0.9044014072350605 1.825092476232191 1.6780540003258047 1.0 7.948759694150809 -11.77295583048966 0.18268645530607375 2.0596543142686213e-16 2.172511407296771 0.1347764694405965 0.5622998059975179 15.371063098111147 0.5107189739140883 7.869437394623706 0.829184775569043 1.6867245633951117e-12 11.77295583048966 2.172511407296771 (ac)S(ph)ESGHSQPGLYGIER ddPTM_A549_PD325901_60min_R1 1 SESGHSQPGLYGIER 15 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 S(0.564)ES(0.435)GHSQPGLYGIER 79.82 1.5017e-07 4084600.0 623.99 345.81 712.01 685.68 831.23 888.0 522.79 311.47 596.31 597.81 679.83 True False 687.3370054428409 374.9526223203005 760.3312802639498 728.0328963077341 772.8472723878251 880.7684224154613 542.6850595316647 305.25748650651195 571.2491644238838 560.0641745771073 596.2152197974383 1.152833712759565 0.6288880422202056 1.2752631181107206 1.2210907607408619 1.296255524389996 1.4772659153429508 0.9102167162321683 0.5119921068271654 0.9581257664270352 0.9393657793026264 1.0 9.21968939376202 (ac)S(ph)ETAPAAPAAAPPAEK ddPTM_A549_MK2206_60min_R1 2 SETAPAAPAAAPPAEK 16 0 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.5)ET(0.5)APAAPAAAPPAEK;S(0.5)ET(0.5)APAAPAAAPPAEK 69.03 5.7383999999999995e-15 121478000.0 4366.7 4733.8 4852.6 4400.9 6754.3 4668.0 4800.0 4146.299999999999 6752.799999999999 7097.4 7183.1 True False 5103.692204435025 4974.730200305409 5540.771647999341 5479.120697563905 5760.751417367106 5161.964661632382 5672.097867793621 4734.050722511198 5223.3015820057335 5494.092410641623 5399.338026525332 0.9452440612834597 0.9213592806870118 1.0261946225220924 1.0147763801130112 1.0669366113153609 0.9560365800905952 1.0505172745118572 0.8767835425850768 0.9673966616546725 1.0175492594926991 1.0 12.398566824458362 -6.551059227615605 0.0017086171413328334 1.5732201289660719 0.3890648743142371 0.00871587069901314 0.054828795890864306 1282361.133551253 506.72932878390395 174169.42527183183 177024.1500133734 2.8115173790019565e-07 6.551059227615605 -1.1841552546518348 (ac)S(ph)ETAPAAPAAAPPAEK ddPTM_A549_PD325901_60min_R1 2 SETAPAAPAAAPPAEK 16 0 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.5)ET(0.5)APAAPAAAPPAEK;S(0.5)ET(0.5)APAAPAAAPPAEK 75.08800000000001 1.3819e-15 131885000.0 10085.7 9761.900000000001 11259.0 10454.0 11240.6 9496.1 10169.9 11119.1 10943.6 10231.5 11669.8 True False 11109.59283930008 10584.56957239103 12023.103445867071 11099.719837243401 10451.099033964832 9418.766910021917 10556.921109682815 10897.3208277348 10483.678549394128 9585.481343881283 10234.488580957219 1.0855054213428037 1.034206007331445 1.1747634823920596 1.084540741771511 1.0211647559420458 0.9202967823469878 1.031504508131997 1.064764569478428 1.0243480625793617 0.9365862561727306 1.0 13.321151392008373 -6.754510160910144 4.796939333066582 1.0106971369050697 1.0971913801397142 0.44751407899722606 0.050014949325331653 0.1332860128303704 7.938398589825599 0.0063848244499705225 0.013026723478249343 1.759907487890234e-07 6.754510160910144 0.0864942432346445 (ac)S(ph)ETAPAAPAAAPPAEKAPVK ddPTM_A549_MK2206_60min_R1 2 SETAPAAPAAAPPAEKAPVK 20 1 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.5)ET(0.5)APAAPAAAPPAEKAPVK;S(0.5)ET(0.5)APAAPAAAPPAEKAPVK 75.462 1.2425e-10 6841200.0 869.66 1515.97 1391.1100000000001 1217.3 1714.0700000000002 1069.35 1361.99 1067.31 1761.64 1710.19 2399.5299999999997 True False 1016.4373468543662 1593.126397768598 1588.3903159643003 1515.5385546466734 1461.9325736147985 1182.5079072229187 1609.4459531158827 1218.6044609997898 1362.6313527610137 1323.8568912214607 1803.6604773410265 0.563541397964659 0.8832739962884811 0.8806481795875022 0.8402571180585466 0.8105364573769412 0.6556155784741611 0.8923220158865727 0.6756285211706076 0.7554810730064995 0.7339834230736725 1.0 10.816712074609995 -10.678279929561997 0.904778592572634 1.0023405264038663 0.7795551447264243 0.0 0.12708214763558512 0.46884298707950617 0.6723587831063207 0.06896623149958005 0.017525911001815494 2.0975874234159378e-11 10.678279929561997 -0.222785381677442 (ac)S(ph)ETAPAAPAAAPPAEKAPVK ddPTM_A549_PD325901_60min_R1 2 SETAPAAPAAAPPAEKAPVK 20 1 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.5)ET(0.5)APAAPAAAPPAEKAPVK;S(0.5)ET(0.5)APAAPAAAPPAEKAPVK 82.90799999999999 2.642e-17 8595900.0 1271.98 1412.46 1231.13 1443.3400000000001 1724.29 2551.2 1619.85 1816.98 2033.2199999999998 1666.8400000000001 2031.34 True False 1401.1104732178148 1531.4929612288008 1314.681885186102 1532.4918337370275 1603.181818877569 2530.423873047663 1681.4942781659315 1780.7389085067641 1947.7708341130092 1561.5954379353057 1781.4980577252084 0.786478810427046 0.8596658046230831 0.7379642540081222 0.8602264970717193 0.8999065768977985 1.4203910366754802 0.9438653446038715 0.9995738703081082 1.093333122462179 0.8765630875451551 1.0 10.798875195238695 -7.011937948652986 24.616556294529463 1.060704474225886 0.818173015636768 0.42681388387810626 0.13360341015116367 307.911519665983 634928.5177582288 0.01717829652899175 0.0308504184655759 9.728862183770653e-08 7.011937948652986 -0.24253145858911795 (ac)S(ph)ETAPAAPAAAPPAEKAPVKK ddPTM_A549_MK2206_60min_R1 2 SETAPAAPAAAPPAEKAPVKK 21 2 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.5)ET(0.5)APAAPAAAPPAEKAPVKK;S(0.5)ET(0.5)APAAPAAAPPAEKAPVKK 62.19 3.1645e-10 13591600.0 2161.61 2724.7 2690.1 2407.5 3579.7 2100.1 2360.83 2044.83 3477.0 3709.2 4678.6 True False 2526.4369217094827 2863.375591865342 3071.5966307305425 2997.337608076783 3053.130871999915 2322.3311880664423 2789.762251921504 2334.6909145292375 2689.4650516280553 2871.289143848721 3516.774497208922 0.7183960540303571 0.8142050603864 0.8734130189946231 0.8522973566987623 0.8681622533440866 0.6603582885139646 0.7932729989186371 0.6638727949096986 0.7647533425195563 0.816455290530431 1.0 11.780037114027172 -10.614335084427347 0.932992853979387 0.9978543281171085 0.7818823674154176 0.14067090356295842 0.08801517059490083 0.33990479090250875 0.5357023950933212 0.047782271097575074 0.013543988952510836 2.4303281405239372e-11 10.614335084427347 -0.2159719607016909 (ac)S(ph)ETAPAAPAAAPPAEKAPVKK ddPTM_A549_PD325901_60min_R1 2 SETAPAAPAAAPPAEKAPVKK 21 2 P16403 P16403 HIST1H1C Histone H1.2 1 S(0.5)ET(0.5)APAAPAAAPPAEKAPVKK;S(0.5)ET(0.5)APAAPAAAPPAEKAPVKK 74.69800000000001 6.7989e-22 27034000.0 2357.6 2629.6 3757.0 3371.0 2690.7 6590.200000000001 4829.5 4225.0 4429.5 4860.0 4636.0 True False 2596.94181642661 2851.2056205820013 4011.9726126763085 3579.2190139035274 2501.714514411077 6536.53159617385 5013.2892653038025 4140.729060551618 4243.343519001181 4553.138770587213 4065.801390025335 0.638728154011091 0.7012653465014027 0.9867605984195182 0.8803231320360251 0.6153066208665663 1.6076859071891652 1.2330384060576465 1.0184287581557978 1.0436671917648048 1.1198625643046576 1.0 11.989324027482747 (ac)S(ph)ETAPAAPAAPAPAEK ddPTM_A549_MK2206_60min_R1 1 SETAPAAPAAPAPAEK 16 0 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.5)ET(0.5)APAAPAAPAPAEK 83.314 5.9225e-11 95607000.0 9493.6 10006.0 8812.5 7814.1 11393.0 8613.2 8505.1 7602.4 12922.0 12860.0 12986.0 True False 11095.887583764481 10515.262660918494 10062.245012569385 9728.554850788285 9717.10479221584 9524.643107020565 10050.366578202393 8680.063481373554 9995.187632193763 9954.917068342103 9761.217804632806 1.1367318920491891 1.0772490555356533 1.0308391036816849 0.9966538033984839 0.9954807880225733 0.9757638132508467 1.0296222028190327 0.8892398115790304 1.0239693276232307 1.0198437600293444 1.0 13.252845433587922 -5.539322205365089 1.4566140750501881 0.9995308040096293 1.1554926819721953 0.6063253966566583 0.036658752130229066 0.3815929274230003 1.0474132908899956 0.0051781307399790255 0.07379597403859496 2.88853606707758e-06 5.539322205365089 0.155961877962566 (ac)S(ph)ETAPAAPAAPAPAEKTPVK ddPTM_A549_MK2206_60min_R1 2 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.425)ET(0.425)APAAPAAPAPAEKT(0.15)PVK;S(0.5)ET(0.5)APAAPAAPAPAEKT(0.001)PVK 122.42 9.413699999999999e-67 4220920000.0 10905.5 10777.3 11667.900000000001 10126.3 14676.7 12571.6 9869.400000000001 11326.0 15765.2 16454.9 16366.0 True False 12746.081786123657 11325.818536429824 13322.583668897401 12607.243954586876 12517.776872106926 13901.918367647308 11662.542228417155 12931.495184420286 12194.407371851194 12737.726661575622 12301.870521378456 1.0361092456609133 0.9206582459754858 1.0829721907530345 1.0248233333847674 1.0175506928278315 1.1300654110680366 0.9480299933371708 1.0511812136168768 0.9912644870273581 1.03543007052787 1.0 13.586590076150006 -8.79339027562614 24.916403738662858 0.9958748894368039 1.0252757075680237 0.00445763766886198 0.0553277079681108 413.6838453783316 322603.4302756042 0.008744410967587206 0.00930958825875505 1.609198890163085e-09 8.79339027562614 0.029400818131219753 (ac)S(ph)ETAPAETATPAPVEK ddPTM_A549_MK2206_60min_R1 3 SETAPAETATPAPVEK 16 0 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.495)ET(0.495)APAET(0.01)ATPAPVEK;S(0.5)ET(0.5)APAETATPAPVEK;S(0.5)ET(0.5)APAETATPAPVEK 113.61 1.1879e-34 131276520.0 6308.62 7459.59 6186.67 6615.7300000000005 8847.29 6043.63 6156.650000000001 6722.87 10085.160000000002 10632.210000000001 9519.59 True False 7373.360825049324 7839.251268514985 7064.032834259589 8236.58414699141 7545.865360934195 6683.162915163088 7275.233612031586 7675.85741042589 7800.887362691167 8230.38637660946 7155.613075681845 1.030430341476608 1.0955387310077547 0.9872016219360031 1.1510661713925276 1.0545379244412492 0.9339748871938918 1.016717021320824 1.072704369177266 1.0901773586951298 1.1502000303202815 1.0 12.804859663543407 -11.123603677034493 1.501214405703898 1.000183362753161 1.0531842725698644 0.0 0.07091963933541144 0.7664018851844225 3.1091608920424108 0.03982727078328218 0.008728273282107776 7.523091135957618e-12 11.123603677034493 0.053000909816703246 (ac)S(ph)ETAPAETATPAPVEK ddPTM_A549_PD325901_60min_R1 3 SETAPAETATPAPVEK 16 0 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.5)ET(0.5)APAETATPAPVEK;S(0.496)ET(0.496)APAET(0.008)ATPAPVEK;S(0.5)ET(0.5)APAETATPAPVEK 130.56 5.1971999999999995e-36 158243800.0 9152.11 10453.06 10066.810000000001 9806.400000000001 10952.029999999999 11027.789999999999 10926.43 11534.29 11304.8 11706.75 13312.11 True False 10081.225469772717 11333.976051217262 10750.004263246212 10412.119056049702 10182.797195252375 10937.983334492126 11342.24127282192 11304.229537474546 10829.698569500972 10967.583807113546 11674.804862418065 0.8635026956403202 0.9708064661279305 0.9207866332610968 0.8918452324258517 0.8722027747145858 0.9368878934929513 0.9715144198541007 0.9682585422788158 0.9276128121303728 0.9394233082575018 1.0 13.511110815876293 -7.536845421512865 4.989455042917866 0.9653203935432209 0.9073867558352365 0.42566782738185227 0.031578684844442304 0.15415798466892305 10.711406721266377 0.005497775097166875 0.00841749029341592 2.9050564675685405e-08 7.536845421512865 -0.05793363770798432 (ac)S(ph)ETAPLAPTIPAPAEK ddPTM_A549_MK2206_60min_R1 4 SETAPLAPTIPAPAEK 16 0 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.5)ET(0.5)APLAPT(0.001)IPAPAEK;S(0.5)ET(0.5)APLAPTIPAPAEK;S(0.5)ET(0.5)APLAPTIPAPAEK;S(0.5)ET(0.5)APLAPT(0.001)IPAPAEK 67.456 5.747000000000001e-08 143978000.0 6010.9 6845.9 5623.9 6063.8 9751.7 6859.0 6839.200000000001 6288.799999999999 10274.0 9285.1 10480.199999999999 True False 7025.392967604483 7194.32706879691 6421.453585950518 7549.43127221433 8317.237847998873 7584.814827364282 8081.794111961273 7180.25665864227 7946.955404206686 7187.5894612179845 7877.677101194574 0.8918102223990813 0.9132548816587011 0.8151455693680014 0.958332154927946 1.0557982691036731 0.9628237778639236 1.025910812050896 0.9114687700963845 1.0087942552255165 0.9123996031936947 1.0 12.943554568070956 -6.480647536804532 7.3150075654454145 0.9989189520710865 0.878399408753841 0.470998122785519 0.048525471517281794 0.11131033488228805 16.361360541761037 0.005279910369782823 0.012174833287387575 3.306377700219895e-07 6.480647536804532 -0.12051954331724546 (ac)S(ph)ETAPLAPTIPAPAEK ddPTM_A549_PD325901_60min_R1 2 SETAPLAPTIPAPAEK 16 0 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.5)ET(0.5)APLAPTIPAPAEK;S(0.5)ET(0.5)APLAPTIPAPAEK 67.456 1.7671e-07 264490000.0 4468.7 4132.3 4525.700000000001 5142.8 5674.6 4601.1 4406.3 5109.6 4471.799999999999 4865.5 5542.3 True False 4922.359134316934 4480.543423308111 4832.841217244921 5460.459075853772 5276.0356723072455 4563.630167089842 4573.984157719879 5007.6850195963425 4283.865797103393 4558.291499648572 4860.632235534385 1.012699355925611 0.9218025981378355 0.994282427276375 1.1234051068365682 1.085462840355621 0.9388964122252936 0.9410265858587444 1.0302538387880709 0.8813392146366363 0.9377980638659504 1.0 12.246928265930675 -7.2900144360776675 24.00903048387887 0.9492899278870984 1.0251359622537344 0.26592172340376086 0.05964508104244229 518.1593333853144 435361.4592140232 0.010412460692948985 0.01664785503098433 5.128443366098504e-08 7.2900144360776675 0.07584603436663595 (ac)S(ph)FEGGDGAGPAMLATGTAR ddPTM_A549_PD325901_60min_R1 2 SFEGGDGAGPAMLATGTAR 19 0 Q96B36-3 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(1)FEGGDGAGPAMLATGTAR;S(1)FEGGDGAGPAMLATGTAR 55.724 4.4561999999999996e-10 2413600.0 736.12 710.05 467.37 522.28 625.15 329.81 362.49 586.4300000000001 569.3299999999999 628.1600000000001 515.96 True False 810.8503604970971 769.8884054206917 499.0885387241222 554.5400494160588 581.2416206504203 327.1241367081568 376.28475531213905 574.7331936045648 545.4030399984065 588.4978703975436 452.5001909399203 1.7919337421998038 1.701410122770339 1.1029576312165303 1.2255023545165455 1.2845113268197346 0.7229259639176373 0.8315681691327715 1.2701280686992544 1.2053100770311524 1.3005472310964838 1.0 8.821774590739668 -5.742484274703609 4.5896216353378065 1.0877061584699665 1.7694344375139646 0.6534640664107332 0.18033596273679414 0.08033866256228193 4.0593826927642445 0.024647945825674644 0.09606029486815362 1.8093214224850773e-06 5.742484274703609 0.681728279043998 (ac)S(ph)FTTRSTFSTNYR ddPTM_A549_MK2206_60min_R1 2 SFTTRSTFSTNYR 13 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.331)FT(0.331)T(0.331)RS(0.006)TFSTNYR;S(0.473)FT(0.473)T(0.052)RS(0.001)TFSTNYR 70.1 1.1369e-08 16358200.0 1591.67 1668.12 1582.8600000000001 1543.94 1744.92 1615.46 1716.6799999999998 1726.3000000000002 2523.2 2115.0299999999997 2650.2 True False 1860.3049834046517 1753.0201828834047 1807.3333492874408 1922.2053693101002 1488.2445794815471 1786.40690494444 2028.5785349341563 1971.0083115720258 1951.6992287224348 1637.24325404787 1992.0821982009763 0.9338495093649595 0.879993900084311 0.9072584208220023 0.9649227180715831 0.7470799050488788 0.8967536111500424 1.0183206981951545 0.9894211761703497 0.9797282614567758 0.8218753500866798 1.0 10.960061462434693 -7.712759176797285 7.399623108967329 0.9919674788072564 0.8854236616293812 0.14913585848227062 0.07277161850976785 0.1377265738692694 17.29036606931455 0.007622704413135352 0.011280848195022059 1.9374960385151036e-08 7.712759176797285 -0.1065438171778752 (ac)S(ph)FTTRSTFSTNYR ddPTM_A549_PD325901_60min_R1 1 SFTTRSTFSTNYR 13 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.255)FT(0.255)T(0.191)RS(0.252)T(0.035)FS(0.008)T(0.002)NYR 61.161 6.7345e-22 33000000.0 2362.7 2015.2 1730.6 2875.0 2533.2 2425.5 1922.9 2651.2 2731.7 2347.3 2245.8 True False 2602.55956467219 2185.0279763450144 1848.0489229432053 3052.582220401257 2355.2767710655735 2405.747532171962 1996.0770117512545 2598.319736173833 2616.8961487426386 2199.091077407275 1969.5808372991573 1.321377379077785 1.1093873046314235 0.9382955438769367 1.5498638911349256 1.1958264045132123 1.2214515325356792 1.0134526971172357 1.3192247238437045 1.328656381695473 1.116527453842839 1.0 10.94367291521003 -10.975099962549839 1.2563884512301964 1.0005096029049108 1.2269720876980728 0.11985465545837648 0.16155042331608885 0.5671347400142261 1.5983031772329401 0.10900627824204313 0.025381060113896764 1.0590099423924155e-11 10.975099962549839 0.226462484793162 (ac)S(ph)GDEMIFDPTMSK ddPTM_A549_MK2206_60min_R1 16 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSK;S(0.999)GDEMIFDPT(0.001)MSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(0.996)GDEMIFDPT(0.004)MSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(0.996)GDEMIFDPT(0.004)MSK;S(1)GDEMIFDPTMSK;S(0.997)GDEMIFDPT(0.002)MSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK 107.24 1.5627e-13 906220680.0 37806.71 41630.22 37875.33 35717.35 53256.74000000002 41829.72000000001 38541.810000000005 41792.920000000006 56504.68000000001 57019.25 58196.53 True False 44187.558362684795 43749.02038095361 43246.62132106892 44468.10235341277 45422.744094776885 46256.11320607912 45544.35798373059 47717.19439544966 43706.46019943248 44138.56182341105 43744.72545848203 1.0101231154056058 1.0000981814933472 0.9886133897928823 1.016536322661741 1.038359336324729 1.0574100699290165 1.0411394175271846 1.090810238156321 0.99912526004796 1.0090030594729142 1.0 15.416821453325607 -6.297831417975595 18.960900505977055 1.0168703882469141 0.9996602911584941 0.05251493994650014 0.028690401639365246 88.0562035529615 45878.73995195617 0.004862917133324701 0.011302139243561512 5.036960928014845e-07 6.297831417975595 -0.01721009708842003 (ac)S(ph)GDEMIFDPTMSK ddPTM_A549_PD325901_60min_R1 8 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(0.998)GDEMIFDPT(0.001)MSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK 107.24 3.6123e-13 1425895000.0 48876.700000000004 48969.2 44258.2 47852.80000000001 55392.8 49349.6 49739.8 49262.79999999999 52219.7 53636.1 55420.100000000006 True False 53838.6266028752 53096.00634142231 47261.82759817687 50808.55877440605 51502.20082278588 48947.71321940774 51632.67530766297 48280.214808081015 50025.08760789839 50249.507492405886 48603.77903695927 1.1077045379935426 1.0924254737691705 0.9723899773768218 1.0453623109382137 1.0596336713575831 1.0070762847923191 1.0623181228027654 0.9933428174662672 1.0292427584665451 1.0338600925289199 1.0 15.568780870045595 -5.647407268940526 7.115512271123906 1.0186353552758023 1.1034815275346708 0.5510074806772172 0.026884866599645837 0.10285035868609692 5.915746387349308 0.0035198243622064215 0.013838987943323 2.2521262420064626e-06 5.647407268940526 0.08484617225886848 (ac)S(ph)GDEMIFDPTMSKK ddPTM_A549_MK2206_60min_R1 14 SGDEMIFDPTMSKK 14 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(0.999)GDEMIFDPT(0.001)MSKK;S(0.998)GDEMIFDPT(0.001)MS(0.001)KK;S(0.999)GDEMIFDPT(0.001)MSKK;S(0.997)GDEMIFDPT(0.002)MS(0.001)KK;S(1)GDEMIFDPTMSKK;S(0.997)GDEMIFDPT(0.003)MS(0.001)KK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK 91.93700000000001 1.2887000000000001e-09 84618400.0 20770.89 26603.23 26360.57 21579.010000000002 36042.240000000005 21388.909999999996 19609.54 19092.800000000003 39228.3 39193.98 44144.0 True False 24276.50843249534 27957.2207754174 30098.895206920424 26865.868418718557 30740.474240866643 23652.270259390603 23172.339588002866 21799.26286924772 30343.152684722714 30340.032696598697 33181.82648757977 0.731620618942789 0.8425461686348706 0.9070897654831234 0.809656105843802 0.9264250192005873 0.7128079663801462 0.6983443059313346 0.6569639220254305 0.914450947903076 0.9143569208872581 1.0 15.018105680914019 -8.954167172298982 7.154495869933017 0.9627585819842102 0.7910710921619313 0.422722480008735 0.08247830305467982 0.14026290103030276 16.72141415661447 0.015568240743597472 0.01635408011540065 1.1113038724701366e-09 8.954167172298982 -0.17168748982227888 (ac)S(ph)GDEMIFDPTMSKK ddPTM_A549_PD325901_60min_R1 7 SGDEMIFDPTMSKK 14 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(0.992)GDEMIFDPT(0.007)MS(0.001)KK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK 115.18 4.5616e-22 131559400.0 24528.5 24881.699999999997 23474.699999999997 28653.6 29715.000000000004 34934.8 29941.90000000001 34099.1 32700.9 31911.399999999994 36685.2 True False 27018.61526307266 26978.568181333725 25067.834306838573 30423.467794952863 27627.9209111849 34650.302571396045 31081.35538933638 33418.96670027355 31326.594893442994 29896.508757966396 32173.152966643098 0.8397876108407956 0.8385428748405516 0.7791537973548546 0.9456166085585613 0.8587259364921225 1.0769943066295442 0.9660649492936335 1.0387221524393988 0.9736874382788094 0.9292377650696184 1.0 14.9735697064771 -6.774631141946855 1.498653263474081 0.9942198181470061 0.8257217793818123 0.6327419031951367 0.05361369010826417 0.15619948941733836 0.7046062828140334 0.006863141931257616 0.017575471200735646 1.6802304774740399e-07 6.774631141946855 -0.16849803876519376 (ac)S(ph)GDGATEQAAEYVPEK ddPTM_A549_PD325901_60min_R1 2 SGDGATEQAAEYVPEK 16 0 Q12996;E9PJ06;Q12996-3;Q12996-2 Q12996 CSTF3 Cleavage stimulation factor subunit 3 1 S(0.499)GDGAT(0.499)EQAAEY(0.002)VPEK;S(0.499)GDGAT(0.499)EQAAEY(0.002)VPEK 46.592 3.6481e-06 1823090.0 566.8900000000001 811.22 699.55 864.86 728.6700000000001 504.05 885.5899999999999 859.3499999999999 848.1700000000001 884.8900000000001 789.4000000000001 True False 624.4402554776387 879.5843563768376 747.0256697358832 918.2804379604283 677.4907329750324 499.945183917245 919.2916120634424 842.2095901029669 812.5243644906263 829.0178943837277 692.3088044188959 0.9019678090065256 1.2705086960653857 1.0790353451635142 1.3264029463430074 0.9785961534083026 0.7221418833996841 1.3278635288122174 1.216523009280365 1.173644418941972 1.197468368294957 1.0 9.435271885482017 -10.960225197120602 1.2835232443222506 1.0013308558834053 1.1205893219459455 0.0 0.18703228473368252 1.1511231333907097 3.4318780880449067 0.11636875377345231 0.028326748520143708 1.0959097806220118e-11 10.960225197120602 0.1192584660625402 (ac)S(ph)GDHLHNDSQIEADFR ddPTM_A549_MK2206_60min_R1 1 SGDHLHNDSQIEADFR 16 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 S(0.5)GDHLHNDS(0.5)QIEADFR 44.806999999999995 3.5193000000000006e-07 15061000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)GEDEQQEQTIAEDLVVTK ddPTM_A549_MK2206_60min_R1 5 SGEDEQQEQTIAEDLVVTK 19 0 Q9UQ80;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 S(0.878)GEDEQQEQT(0.122)IAEDLVVTK;S(0.886)GEDEQQEQT(0.114)IAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK 172.99 8.585499999999996e-184 362814200.0 32427.04 39435.7 36742.87 33092.95 47116.079999999994 41899.88 37308.049999999996 36955.14 58026.9 53651.93 50830.42 True False 37899.93158698849 41442.808686506425 41953.56146439552 41200.72423559896 40185.36704629374 46333.69749071062 44086.439761778696 42193.64426536973 44883.89979991832 41531.92175011634 38207.823865775725 0.9919416431600799 1.0846681253581785 1.0980358790330114 1.0783321337623757 1.051757545456269 1.2126756460530475 1.153858956130414 1.1043194821457567 1.1747305985704835 1.087000450379435 1.0 15.221580470601133 -5.251671110601134 3.2351926891870306 1.0973338148677063 0.975661947795931 0.2441562222139393 0.05605215039581505 0.5453322291976098 8.810106043669448 0.010061583892336416 0.16787124954019506 5.601816641410647e-06 5.251671110601134 -0.12167186707177535 (ac)S(ph)GEDEQQEQTIAEDLVVTK ddPTM_A549_PD325901_60min_R1 6 SGEDEQQEQTIAEDLVVTK 19 0 Q9UQ80;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 S(0.983)GEDEQQEQT(0.017)IAEDLVVTK;S(0.886)GEDEQQEQT(0.114)IAEDLVVTK;S(0.995)GEDEQQEQT(0.005)IAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK 158.2 1.5283999999999999e-111 902823900.0 31269.9 31144.12 33126.630000000005 32788.75 37539.81 33356.66 31374.32 37685.54 33613.95 33580.19 37054.81 True False 34444.3972283163 33768.744292698655 35374.80231840867 34814.036618845836 34903.143250913956 33085.01442032536 32568.28691628666 36933.872340965805 32201.272577159863 31459.931072568917 32497.303279793927 1.0599155545848948 1.0391245083309815 1.0885457791325075 1.0712900181010527 1.0740319881439493 1.0180849203231228 1.0021842931360052 1.1365211452462407 0.9908906071348348 0.9680782064193608 1.0 14.988032383650916 (ac)S(ph)GGGPSGGGPGGSGR ddPTM_A549_MK2206_60min_R1 1 SGGGPSGGGPGGSGR 15 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 S(0.981)GGGPS(0.018)GGGPGGS(0.001)GR 46.592 0.0046209 847770.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)GGGPSGGGPGGSGR ddPTM_A549_PD325901_60min_R1 2 SGGGPSGGGPGGSGR 15 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 S(0.985)GGGPS(0.015)GGGPGGSGR;S(0.994)GGGPS(0.006)GGGPGGSGR 51.013000000000005 0.001375 4273800.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 167.76 136.74 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 157.16760496989926 119.92184686627786 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.3105835932059426 1.0 6.905950696688003 -10.632928445752034 0.679319263200112 1.082152444714398 6.834839394132852e-26 0.943421979003242 0.10715249247264921 0.06440817340675754 0.046900237562256634 0.039956722371451286 0.008142451977166855 2.328474864986929e-11 10.632928445752034 -1.082152444714398 (ac)S(ph)GGKYVDSEGHLYTVPIR ddPTM_A549_PD325901_60min_R1 2 SGGKYVDSEGHLYTVPIR 18 1 Q03135 Q03135 CAV1 Caveolin-1 1 S(0.821)GGKY(0.166)VDS(0.014)EGHLYTVPIR;S(0.837)GGKY(0.156)VDS(0.007)EGHLYTVPIR 59.9 9.842399999999999e-11 19794800.0 2352.7 2594.1000000000004 2662.7 2929.9 3373.4 3415.4 2842.0 3767.4 3191.3 3144.8 3902.4 True False 2591.5443720338017 2812.7139109947407 2843.40683411584 3110.873268714312 3136.464021598218 3387.5861147722594 2950.1538652020727 3692.256251531874 3057.180759044692 2946.236791305075 3422.4295393517823 0.7572235869973958 0.8218471348068941 0.8308153028197592 0.9089663447982979 0.9164437092230898 0.9898190965865371 0.8620057275922297 1.0788406917009015 0.8932779254890754 0.8608611974121461 1.0 11.740805124385096 -5.932862159677772 0.7698296642481676 0.9561563498964464 0.731064506824704 0.5104669270970181 0.061383014791605434 0.6923348630017626 0.4924591216138725 0.009239147027271495 0.10940555621937187 1.1671800084575407e-06 5.932862159677772 -0.22509184307174235 (ac)S(ph)GGSSCSQTPSR ddPTM_A549_MK2206_60min_R1 1 SGGSSCSQTPSR 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 S(0.466)GGS(0.466)S(0.069)CSQTPSR 61.65 6.8574e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)GGSSCSQTPSR ddPTM_A549_PD325901_60min_R1 2 SGGSSCSQTPSR 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 S(0.992)GGS(0.007)S(0.001)CSQTPSR;S(0.985)GGS(0.015)SCSQTPSR 114.5 5.7174e-18 2037800.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)GSMATAEASGSDGK ddPTM_A549_MK2206_60min_R1 2 SGSMATAEASGSDGK 15 0 D6RFH4;H3BUX2;O43169 D6RFH4 CYB5B Cytochrome b5 type B 1 S(0.497)GS(0.497)MAT(0.007)AEASGSDGK;S(0.49)GS(0.49)MAT(0.02)AEASGSDGK 74.76 4.3260000000000005e-08 2110320.0 891.51 983.47 957.86 766.1700000000001 1528.6 1180.19 983.1099999999999 1469.18 1611.76 1305.06 1535.19 True False 1041.9750926731551 1033.524422259994 1093.6989512328748 953.8816843946784 1303.7449649241748 1305.0769224532814 1161.7283614180385 1677.4407641750497 1246.6989334518357 1010.2460395964655 1153.9599539114615 0.9029560247227622 0.8956328326271294 0.9477789480697956 0.8266159333878111 1.1298008743761014 1.1309551237281623 1.006731955888283 1.4536386280036826 1.0803658560472797 0.8754602238770388 1.0 10.172377443397817 -6.765565966708917 24.99755509889931 1.0807940592095935 0.8973116367222356 0.334824480158176 0.1367431141013349 97.67898365868257 591713.0590356498 0.018603279694411435 0.0360791190454155 1.7156710902512423e-07 6.765565966708917 -0.1834824224873579 (ac)S(ph)GSMATAEASGSDGK ddPTM_A549_PD325901_60min_R1 1 SGSMATAEASGSDGK 15 0 D6RFH4;H3BUX2;O43169 D6RFH4 CYB5B Cytochrome b5 type B 1 S(0.493)GS(0.493)MAT(0.013)AEASGSDGK 68.44 5.008500000000001e-10 1020400.0 751.27 786.95 862.92 979.28 862.78 995.12 636.33 795.83 734.97 941.71 1071.9 True False 827.5383773442574 853.2690383012649 921.4829403595003 1039.767901493755 802.1813092294163 987.0160726509849 660.545886363137 779.9565463334427 704.0817668270228 882.2502698867662 940.0630953339421 0.8803008877295495 0.9076720940716804 0.9802352043531275 1.1060618235676984 0.8533270939058133 1.0499466233171972 0.7026612252324285 0.8296853160227249 0.7489728831200518 0.9385011221755931 1.0 9.876613780895338 -7.7307360466000565 24.99988747453094 0.8615506975696419 0.9627239207855964 0.24482454645674578 0.10192548601929553 315.70214990709707 257056.80243073896 0.01847334444921999 0.027398704368679912 1.858933925696311e-08 7.7307360466000565 0.10117322321595457 (ac)S(ph)GTNLDGNDEFDEQLR ddPTM_A549_MK2206_60min_R1 1 SGTNLDGNDEFDEQLR 16 0 O43719;Q5H919;Q5H918 O43719 HTATSF1 HIV Tat-specific factor 1 1 S(0.5)GT(0.5)NLDGNDEFDEQLR 64.878 2.3189e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)HAAEPARDGVEASAEGPR ddPTM_A549_MK2206_60min_R1 1 SHAAEPARDGVEASAEGPR 19 1 P19532;P19532-2 P19532 TFE3 Transcription factor E3 1 S(1)HAAEPARDGVEASAEGPR 45.257 0.0028605999999999996 1788900.0 110.66 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 129.33670262275393 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)HAAEPARDGVEASAEGPR ddPTM_A549_PD325901_60min_R1 2 SHAAEPARDGVEASAEGPR 19 1 P19532;P19532-2 P19532 TFE3 Transcription factor E3 1 S(1)HAAEPARDGVEASAEGPR;S(1)HAAEPARDGVEASAEGPR 68.567 2.8814000000000002e-05 4337400.0 142.51 0.0 115.54 202.38 111.82 0.0 101.84 0.0 0.0 109.56 0.0 True False 156.9775102896829 0.0 123.38123919846177 214.88055296167184 103.96614895805799 0.0 105.71557692898628 0.0 0.0 102.64236290237343 0.0 0.0 (ac)S(ph)HGAGLVR ddPTM_A549_PD325901_60min_R1 1 SHGAGLVR 8 0 F8WDZ3;Q96FZ5-2;Q96FZ5 F8WDZ3 CMTM7 CKLF-like MARVEL transmembrane domain-containing protein 7 1 S(1)HGAGLVR 41.501999999999995 0.0013805999999999998 1364800.0 0.0 0.0 103.48 103.26 88.881 0.0 90.374 114.18 0.0 102.52 0.0 True False 0.0 0.0 110.50277507579037 109.63813567952488 82.6383051828041 0.0 93.81323202455033 111.90259032752283 0.0 96.04686970382734 0.0 0.0 (ac)S(ph)KISEAVK ddPTM_A549_PD325901_60min_R1 1 SKISEAVK 8 1 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 1 S(0.993)KIS(0.007)EAVK 43.808 0.0025648000000000003 4531300.0 3320.5 3227.9 3174.7 3211.5 3300.6 3149.1 3561.7 3581.9 3953.4 3398.8 4172.4 True False 3657.5947155770973 3499.9264613160367 3390.1542330219536 3409.8670611543107 3068.777242451853 3123.454773680779 3697.2424425370255 3510.456194553808 3787.2523463188304 3184.1991879571633 3659.2212510228023 0.999555496830029 0.9564675708903252 0.9264687758561632 0.9318559407144912 0.8386421678093632 0.853584563329624 1.0103905145127794 0.9593451594577911 1.0349886182094732 0.8701849299402533 1.0 11.837320934037697 -7.7916579422667995 23.91376303203846 1.0113261210495064 0.916961745880354 0.05218030470892865 0.06190697648877023 82.53146143854336 65311.74644698115 0.00752504335475781 0.010398269817728076 1.6156305539878945e-08 7.7916579422667995 -0.09436437516915241 (ac)S(ph)KS(ph)ESPKEPEQLR ddPTM_A549_MK2206_60min_R1 1 SKSESPKEPEQLR 13 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.969)KS(0.97)ES(0.061)PKEPEQLR 52.49 6.901e-05 8591800.0 2006.5 2253.8 1857.8 1447.4 2599.1 1694.6 1694.7 1876.0 2650.8 2790.0 2695.1 True False 2345.148145784888 2368.508793241865 2121.263975529237 1802.013064976254 2216.77583300695 1873.9214472155588 2002.6050534478836 2141.928745009046 2050.3980324577637 2159.7370622608473 2025.832289024016 1.1576220590869881 1.1691534418098055 1.04710739730148 0.8895173972394372 1.0942543689413327 0.9250131204683073 0.9885344726204741 1.0573080292055972 1.0121262473536656 1.0660986469424587 1.0 10.98429902849098 -5.853142530566813 4.266965307095979 1.0016928030470518 1.1639744163999455 0.5353342060754493 0.05639240813104178 0.0948357720303817 3.1095845702921747 0.006514694005805495 0.022486459162563182 1.4023533924127046e-06 5.853142530566813 0.1622816133528937 (ac)S(ph)KS(ph)ESPKEPEQLRK ddPTM_A549_MK2206_60min_R1 1 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.995)KS(0.995)ES(0.01)PKEPEQLRK 60.345 0.00095266 64315000.0 4926.4 5144.0 4555.6 4507.3 7059.9 5186.1 4670.8 4560.4 7654.1 7551.9 8080.7 True False 5757.855881083819 5405.80762819955 5201.652582043812 5611.588702340383 6021.398062192975 5734.889659745435 5519.423900185506 5206.850665639264 5920.458571086078 5845.920544977666 6074.039174025588 0.9479451343853916 0.8899856377806062 0.8563745529149099 0.9238644239136978 0.9913334256950923 0.9441640884157517 0.9086908632048697 0.8572303398873878 0.9747152432608162 0.9624436684532056 1.0 12.568440497742731 -8.93662936932063 9.452895775376492 0.9888902154733331 0.9156915146478264 0.3551081817827644 0.03826900794425023 0.24507128839936518 34.44411172859491 0.006936267333333249 0.00736207577689563 1.1570992995332913e-09 8.93662936932063 -0.07319870082550672 (ac)S(ph)KS(ph)ESPKEPEQLRK ddPTM_A549_PD325901_60min_R1 1 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.935)KS(0.949)ES(0.116)PKEPEQLRK 55.31399999999999 0.00038455 67937000.0 5858.5 5872.3 6812.1 7137.4 8483.6 7352.8 6638.1 7189.6 7768.3 8214.8 8517.0 True False 6453.25060720025 6367.179329838643 7274.410070485035 7578.260987788506 7887.741202831166 7292.921234613069 6890.716528007696 7046.197787867907 7441.8253659909415 7696.116126053461 7469.462993711337 0.8639510782278923 0.8524279904993539 0.9738866203111898 1.0145657049467636 1.0559984311418351 0.9763648659553035 0.922518330140882 0.9433339175520672 0.9962999177124696 1.0303439661636917 1.0 12.866788810921822 -5.8014903593326 4.874652453338286 0.9922838737038323 0.8568830146813841 0.6762347627419474 0.035392329994433425 0.07576556448551186 4.0745605931009425 0.00495431689765498 0.017177052050463087 1.579463669005806e-06 5.8014903593326 -0.13540085902244825 (ac)S(ph)KSES(ph)PKEPEQLR ddPTM_A549_MK2206_60min_R1 1 SKSESPKEPEQLR 13 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.693)KS(0.335)ES(0.972)PKEPEQLR 54.236999999999995 4.6058e-05 100610000.0 7244.4 7775.2 6800.0 7046.9 8318.4 6200.0 6738.0 6795.1 9162.2 8110.7 9539.6 True False 8467.077611424895 8170.924469435684 7764.342250833683 8773.390816347362 7094.774379317843 6856.079884773085 7962.207381915294 7758.326234120989 7086.976329026908 6278.487236874207 7170.654040433941 1.180795721517266 1.1394950060847184 1.0827941505826453 1.223513331821044 0.9894180278830597 0.9561303398703893 1.1103878861004777 1.0819551731785242 0.9883305329004592 0.8755808328600185 1.0 12.807888998827334 -6.084218988882391 0.37674049200452264 0.9928989181467295 1.2436765154504392 0.46994834464789026 0.07267716127989045 2.1891415870572914 0.317295336540525 0.0187545144143473 0.224167145588385 8.237226559225073e-07 6.084218988882391 0.25077759730370974 (ac)S(ph)KSES(ph)PKEPEQLR ddPTM_A549_PD325901_60min_R1 1 SKSESPKEPEQLR 13 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.559)KS(0.559)ES(0.883)PKEPEQLR 45.598 0.00023749 13273000.0 4137.4 4049.1 4064.4 4352.6 5160.9 4060.9 4616.4 4960.3 5174.8 4744.5 5107.0 True False 4557.425802207098 4390.3318673176855 4340.234625222677 4621.450216528178 4798.41618813845 4027.829376787105 4792.079628191012 4861.362925219927 4957.321151851746 4444.931460298566 4478.871375940332 1.0175388886335843 0.9802317367053084 0.9690464987535955 1.031833653753433 1.0713449405836153 0.8992956123776761 1.069930173465837 1.0853990921316181 1.10682373655148 0.9924222169397218 1.0 12.12891952018869 (ac)S(ph)KSES(ph)PKEPEQLRK ddPTM_A549_MK2206_60min_R1 1 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.526)KS(0.526)ES(0.948)PKEPEQLRK 41.86 0.00014439999999999999 35106000.0 4801.7 4652.5 4031.1 3397.7 6401.8 4839.3 4311.4 4373.4 6892.0 6108.1 6701.1 True False 5612.109569706108 4889.292377565789 4602.770595196421 4230.136652528547 5460.103700413181 5351.391513932643 5094.725572334462 4993.342842975779 5330.973004262455 4728.275967740316 5037.031929048584 1.114169941496906 0.970669324005913 0.9137862654100372 0.8398073929476864 1.083992275078651 1.0624096867584154 1.0114538966793438 0.9913264226456755 1.0583560079337022 0.9387027984619929 1.0 12.298358160731455 -6.807565177568701 24.99999955381466 1.030060457594232 0.9571236368319413 0.1370339231816574 0.07156720522504491 146.0852141102321 79177.17134594003 0.009615367297723474 0.018171380726626815 1.5575242688796342e-07 6.807565177568701 -0.07293682076229069 (ac)S(ph)KSES(ph)PKEPEQLRK ddPTM_A549_PD325901_60min_R1 3 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.684)KS(0.362)ES(0.954)PKEPEQLRK;S(0.967)KS(0.111)ES(0.922)PKEPEQLRK;S(0.795)KS(0.278)ES(0.927)PKEPEQLRK 59.9 7.6975e-06 183124000.0 29404.4 31598.9 32217.2 30907.3 35074.0 34142.0 33383.0 34049.0 34699.0 34210.0 39822.0 True False 32389.513041624814 34261.85019934919 34403.65292976183 32816.3737254288 32610.523238731228 33863.95887174401 34653.40833287852 33369.865984076234 33240.721699022906 32049.974761684858 34924.1464524566 0.927424613962083 0.9810361506183402 0.9850964568768106 0.9396471226606158 0.9337529059765287 0.9696431355264227 0.9922478242969618 0.9554955345724407 0.9517976837107416 0.9177024499457861 1.0 15.091937236090251 -10.832827932322267 0.9050883021603454 1.0018746766570785 0.9601588124092961 0.0 0.03162562551629009 0.6065876285703972 0.8152683705820689 0.01770789322691253 0.0036445051936239165 1.469508382232514e-11 10.832827932322267 -0.0417158642477824 (ac)S(ph)KSESPK ddPTM_A549_PD325901_60min_R1 1 SKSESPK 7 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.971)KS(0.028)ES(0.001)PK 47.849 0.0099615 6885400.0 4447.4 4605.4 4295.5 3707.9 4595.3 3931.1 3063.8 3346.6 4029.2 4603.7 4949.5 True False 4898.896773997165 4993.513220652707 4587.018460939867 3936.9285617481155 4272.5419809243795 3899.0864249520496 3180.3945855756892 3279.8494376430863 3859.8667359204333 4313.021596327641 4340.742877465575 1.1285848787379638 1.1503821722719187 1.0567358146811232 0.9069711505342067 0.9842881970974942 0.8982532564169305 0.7326843988125422 0.7555963415087348 0.8892180082719136 0.993613701175012 1.0 12.08372625219837 -6.092061272537086 2.417713433247641 0.913679187072722 1.1414714320428365 0.5696255200980725 0.08439916761767062 0.20282281621198878 2.2872376009634316 0.013995012980221948 0.048474095651957934 8.089817557491114e-07 6.092061272537086 0.22779224497011452 (ac)S(ph)KSESPKEPEQLR ddPTM_A549_MK2206_60min_R1 3 SKSESPKEPEQLR 13 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.497)KS(0.497)ES(0.006)PKEPEQLR;S(0.907)KS(0.041)ES(0.052)PKEPEQLR;S(0.477)KS(0.477)ES(0.046)PKEPEQLR 64.22399999999999 1.7008000000000002e-09 203472000.0 16114.300000000001 18385.0 17686.8 16205.5 23111.800000000003 16628.0 18432.4 17652.600000000002 26792.3 25292.5 27789.5 True False 18833.999883190354 19320.71797131586 20195.054194418397 20175.848227492534 19712.084836016333 18387.563923226902 21781.328487149814 20154.910108820193 20723.886828511455 19578.906683595866 20888.60019881746 0.9016401148917857 0.9249407709191368 0.9667978707142699 0.9658784234203842 0.9436766776326289 0.8802678852682456 1.0427375831714607 0.9648760528224001 0.9921146764867791 0.9373010396696788 1.0 14.35042819632554 -7.765706579841358 24.999999998382094 0.9964950232869211 0.9341317727619607 0.3927329754800619 0.03421997963477919 64.01530903908949 375043.4428354504 0.004403815391684082 0.006200365550806124 1.7151156909865334e-08 7.765706579841358 -0.06236325052496039 (ac)S(ph)KSESPKEPEQLR ddPTM_A549_PD325901_60min_R1 6 SKSESPKEPEQLR 13 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.45)KS(0.45)ES(0.1)PKEPEQLR;S(0.93)KS(0.049)ES(0.021)PKEPEQLR;S(0.333)KS(0.333)ES(0.333)PKEPEQLR;S(0.334)KS(0.334)ES(0.333)PKEPEQLR;S(0.954)KS(0.039)ES(0.007)PKEPEQLR;S(0.964)KS(0.03)ES(0.006)PKEPEQLR 62.528 1.9576e-08 797619100.0 34034.5 34758.0 39199.1 42326.4 42703.6 56152.7 42906.90000000001 45878.4 48236.1 48675.7 50727.0 True False 37489.65738512532 37687.17864321161 41859.38664933718 44940.80559777105 39704.24645542234 55695.41102856836 44539.74555905658 44963.31932109144 46208.904462556246 45602.30799495309 44487.90058494718 0.8426933366644465 0.8471332238132936 0.9409162064055823 1.0101804087598845 0.8924729181052112 1.2519226642808432 1.0011653724592018 1.010686472723892 1.0386847627103217 1.025049674076618 1.0 15.44112539788445 -5.989308803273851 1.2303159186727834 1.0275777018386472 0.8226456621835043 0.4517925464120375 0.07962454282998797 0.4052829981440973 0.9932242165738464 0.011201067464788276 0.07502354654370309 1.024922899957824e-06 5.989308803273851 -0.20493203965514284 (ac)S(ph)KSESPKEPEQLRK ddPTM_A549_MK2206_60min_R1 2 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.956)KS(0.04)ES(0.005)PKEPEQLRK;S(0.73)KS(0.239)ES(0.031)PKEPEQLRK 50.843 6.704800000000001e-06 94937000.0 11237.400000000001 13244.5 11805.0 10492.900000000001 15269.300000000001 12111.0 11942.099999999999 10470.3 18288.9 18321.3 19104.7 True False 13133.99839194773 13918.588478166595 13479.126510454647 13063.66097104418 13023.206197119398 13392.577981368837 14111.824988953782 11954.497088948952 14146.493351371964 14182.50560530453 14360.47572710369 0.914593544220744 0.9692289268590814 0.938626739573425 0.9096955573963385 0.906878465909012 0.9325998828918974 0.9826850626069017 0.8324582915025761 0.9850992139955461 0.98760694804398 1.0 13.809815922426639 -8.965827177041797 24.9996867597217 0.9934262021150589 0.9255490958696181 0.4015660862242658 0.03674990699598767 115.09949052522511 84203.45584899584 0.005981965225204601 0.006337244619730497 1.0818643822936466e-09 8.965827177041797 -0.06787710624544085 (ac)S(ph)KSESPKEPEQLRK ddPTM_A549_PD325901_60min_R1 3 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.464)KS(0.464)ES(0.072)PKEPEQLRK;S(0.891)KS(0.099)ES(0.009)PKEPEQLRK;S(0.994)KS(0.006)ESPKEPEQLRK 72.891 1.185e-06 381681000.0 21512.3 21572.4 25342.2 26498.6 26848.0 35786.399999999994 29355.2 29711.2 27840.5 28427.6 31741.2 True False 23696.212859481744 23390.381856344375 27062.074087028366 28135.358339312977 24962.289100571837 35494.96742334311 30472.3281997818 29118.586808014497 26670.460602946696 26632.676484515447 27837.2336240449 0.8512416563912344 0.8402552556853394 0.972153858839372 1.0107095668806172 0.8967230522148659 1.2750896120900355 1.0946607917771252 1.0460301911200978 0.9580858846516134 0.956728561616518 1.0 14.764728227403713 -5.842267781283354 3.4137107114683176 1.009102627388629 0.8424832425760655 0.3424492303320811 0.09428338016327299 0.21890234685860954 4.974984649961673 0.01349430051324168 0.05104208402597744 1.4379117040507522e-06 5.842267781283354 -0.16661938481256344 (ac)S(ph)LDIQSLDIQCEELSDAR ddPTM_A549_PD325901_60min_R1 3 SLDIQSLDIQCEELSDAR 18 0 P13489;E9PR82;E9PMI1;E9PMA9;E9PMN0;E9PIK5;E9PMJ3;E9PLZ3;E9PIM9 P13489 RNH1 Ribonuclease inhibitor 1 S(0.5)LDIQS(0.5)LDIQCEELSDAR;S(0.897)LDIQS(0.103)LDIQCEELSDAR;S(0.893)LDIQS(0.107)LDIQCEELSDAR 82.36200000000001 6.5575e-13 2044570.0 0.0 0.0 142.81 0.0 127.55 120.75 175.68 0.0 0.0 0.0 177.79 True False 0.0 0.0 152.50194538629324 0.0 118.59132802361209 119.76665203453489 182.36559853578467 0.0 0.0 0.0 155.9229571036678 0.0 0.0 0.9780596021206803 0.0 0.7605764425360712 0.7681142934898686 1.1695878652079184 0.0 0.0 0.0 1.0 7.28468954668341 -11.075384288606807 1.4214481719026195 0.9971599196186088 0.37846173902580876 0.0 0.5169015986028727 0.5382593545762221 1.956235311060965 0.31146700612924877 0.07005062590817304 8.40650956378798e-12 11.075384288606807 -0.6186981805928 (ac)S(ph)LLNKPK ddPTM_A549_PD325901_60min_R1 2 SLLNKPK 7 1 P62316;K7ERG4 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 1 S(1)LLNKPK;S(1)LLNKPK 62.842 0.0073687 42141000.0 15003.2 16583.2 15945.1 15679.2 19043.699999999997 16643.699999999997 16872.4 16829.300000000003 16783.1 17650.300000000003 18699.8 True False 16526.31381922791 17980.724462745457 17027.23037167555 16647.66857395319 17706.136209198437 16508.15922540115 17514.488414931555 16493.62640916955 16077.764671802395 16535.857045780955 16399.8431477989 1.0077117000625695 1.096396124078707 1.0382556844124973 1.0151114510011368 1.0796527777507958 1.0066047020466038 1.0679668248706546 1.005718546240074 0.9803608807051467 1.0082936096861579 1.0 14.001394396162636 -8.438945853542826 5.253622246106593 0.9908003771609027 1.0449023105024877 0.38053306184077595 0.02810074345176791 0.1401810863965484 6.543890816793573 0.0041963098306825744 0.005061100670354192 3.639604107270492e-09 8.438945853542826 0.05410193334158497 (ac)S(ph)LSHLYR ddPTM_A549_MK2206_60min_R1 2 SLSHLYR 7 0 Q9UBB9;F6XM96;F6UKU9;F6SQZ1;F6UQ07 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 S(0.998)LS(0.002)HLYR;S(0.992)LS(0.008)HLYR 72.618 0.0041441 2732600.0 0.0 144.16 228.57999999999998 225.319 90.93299999999999 0.0 93.206 127.55 83.39399999999999 152.85 413.68 True False 0.0 151.49712824285518 260.9960811317005 280.5221651149543 77.5568761582167 0.0 110.1403237219942 145.63060310549253 64.50539215285305 118.32107884106462 310.95183901282144 0.0 0.487204477464462 0.8393456747523493 0.9021402349814936 0.24941764745446257 0.0 0.354203802336904 0.46833813097174753 0.207444961115645 0.38051255530984623 1.0 8.28054733926941 -10.875510633080328 1.0785764070662365 1.0062078842022715 0.3924422421139376 0.0 0.3288741488835645 0.4631102810512126 0.9405259173389023 0.2176443652127112 0.05037969040729368 1.3319544309113914e-11 10.875510633080328 -0.613765642088334 (ac)S(ph)LSHLYR ddPTM_A549_PD325901_60min_R1 1 SLSHLYR 7 0 Q9UBB9;F6XM96;F6UKU9;F6SQZ1;F6UQ07 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 S(0.995)LS(0.005)HLYR 50.12 0.011526999999999999 1860500.0 653.17 536.81 483.12 349.89 515.53 455.02 416.86 514.35 343.19 524.92 680.32 True False 719.47933756166 582.048862634859 515.9074284365662 371.5019106421551 479.32095128195033 451.31446798139996 432.72383541454457 504.09088575023077 328.7669177753729 491.77646161659237 596.6449529038041 1.2058751759485014 0.9755363886044665 0.8646807886762514 0.6226515599169942 0.8033604389832664 0.7564204905864083 0.7252618719198515 0.8448758064521906 0.5510260602646535 0.8242363556804955 1.0 9.220728868232655 -5.475223604165568 1.787515571795629 0.7732755785367524 1.2512226604499443 0.5803042478286389 0.1123039487042129 0.4442064127091368 1.932070868087518 0.022644206935387816 0.3088369919279447 3.347930206900846e-06 5.475223604165568 0.4779470819131919 (ac)S(ph)LSNKLTLDKLDVK ddPTM_A549_PD325901_60min_R1 1 SLSNKLTLDKLDVK 14 2 P00558 P00558 PGK1 Phosphoglycerate kinase 1 1 S(0.481)LS(0.481)NKLT(0.038)LDKLDVK 48.625 0.00050051 2239500.0 2463.4 2076.1 2577.9 2045.0 2484.9 3017.2 2530.5 2687.6 2457.8 2702.1 2831.5 True False 2713.4825545407666 2251.060233073583 2752.851796172014 2171.3150054680254 2310.36919643962 2992.6289235494714 2626.799562242734 2633.9937096185886 2354.507213229732 2531.488944856729 2483.243450357362 1.092717089075689 0.9065000182521913 1.1085710487934048 0.8743866837363663 0.9303836867493344 1.2051290915994581 1.057809922689905 1.0607069996457787 0.9481580281187881 1.0194284191074476 1.0 11.278009990963856 -8.766236436600687 24.953812703038405 0.9755190704272925 1.0263798019408519 0.02963387043937149 0.09304830583669092 273.5953742545621 1423213.6093541721 0.015753318820442525 0.017043485993157904 1.7130244567208813e-09 8.766236436600687 0.05086073151355941 (ac)S(ph)LYDDLGVETSDSK ddPTM_A549_PD325901_60min_R1 1 SLYDDLGVETSDSK 14 0 Q96I25;Q5W011;Q5W010 Q96I25 RBM17 Splicing factor 45 1 S(0.552)LY(0.447)DDLGVETSDSK 68.069 6.5623999999999995e-15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)QDGASQFQEVIR ddPTM_A549_MK2206_60min_R1 2 SQDGASQFQEVIR 13 0 C9J3M0;F2Z3P4;F8WC70;F2Z3H1;C9JTZ5;C9JUW1;C9JWG0;C9JVG3;C9JNZ1;Q16851-2 C9J3M0 UGP2 1 S(0.995)QDGAS(0.005)QFQEVIR;S(0.992)QDGAS(0.008)QFQEVIR 70.942 5.4255e-05 4258600.0 0.0 283.21000000000004 181.1 204.07 366.6 140.82 298.96000000000004 250.31 228.78 235.65 420.14 True False 0.0 297.6241793122853 206.78270318029112 254.06715916105037 312.6736256320833 155.7214789312493 353.2771621990792 285.79220904222495 176.961695286588 182.41650133396715 315.80764272589147 0.0 0.9424223452711413 0.6547742207739106 0.8044997168785133 0.99007618350602 0.4930896465555438 1.118646651961206 0.9049565950190802 0.5603464620398175 0.5776190207413614 1.0 8.302902275441912 -5.255508893918747 24.37168529711381 0.8090261814484896 5.057715874959857e-07 0.5771265735130582 0.19797454200485143 254.86339514308835 1047331.9882330709 0.027506987474480823 0.3388901078867447 5.552532459692813e-06 5.255508893918747 -0.8090256756769021 (ac)S(ph)QDGASQFQEVIR ddPTM_A549_PD325901_60min_R1 2 SQDGASQFQEVIR 13 0 C9J3M0;F2Z3P4;F8WC70;F2Z3H1;C9JTZ5;C9JUW1;C9JWG0;C9JVG3;C9JNZ1;Q16851-2 C9J3M0 UGP2 1 S(0.999)QDGAS(0.001)QFQEVIR;S(0.999)QDGAS(0.001)QFQEVIR 84.65799999999999 2.2635e-06 9270100.0 0.0 0.0 256.94 145.21 166.78 0.0 141.77 284.227 144.89 186.05 0.0 True False 0.0 0.0 274.37749350573614 154.1792919041624 155.06594815976496 0.0 147.16513492952075 278.55786951323205 138.8007771685474 174.30277124850844 0.0 0.0 (ac)S(ph)QERPTFYR ddPTM_A549_MK2206_60min_R1 2 SQERPTFYR 9 1 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;B5TY33 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 S(0.997)QERPT(0.003)FYR;S(1)QERPTFYR 86.794 2.2334e-05 38353000.0 533.8299999999999 352.03 468.41999999999996 433.64 494.22 311.28999999999996 174.46 174.78 580.41 567.71 435.76 True False 623.9274531095676 369.94682335829873 534.8489995787517 539.8818194668391 421.5208926892751 344.23050118242134 206.1571237531823 199.55560024130133 448.9480617243137 439.46391670828143 327.54876563582263 1.9048383586438749 1.1294404442043156 1.6328835754899804 1.6482486765561315 1.2868950730772504 1.05092901362097 0.6293936823513884 0.6092393596841471 1.3706296857899505 1.3416747758313614 1.0 8.355565901626465 -6.984218322155511 3.739802009055392 1.080138204212476 1.5487608703945923 0.4565685392801113 0.28712881789729333 0.20576960829925334 6.3144192168665425 0.0454207048876745 0.08641358359318381 1.0370069758185176e-07 6.984218322155511 0.46862266618211623 (ac)S(ph)QERPTFYR ddPTM_A549_PD325901_60min_R1 2 SQERPTFYR 9 1 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;B5TY33 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 S(1)QERPTFYR;S(0.99)QERPT(0.01)FYR 86.794 2.3029e-05 45768000.0 469.97 613.84 638.71 520.1800000000001 795.97 604.58 686.0799999999999 706.74 515.6800000000001 332.97 860.53 True False 517.6810084263719 665.5704510716675 682.0567014752427 552.3103371855049 740.0638131474285 599.6565009278603 712.189149837381 692.6435162731959 494.0077629255062 311.9462173749845 754.6902653491155 0.6859516177632099 0.8819120659569901 0.9037571210219958 0.731837102642379 0.9806192647855065 0.7945729903518267 0.943684028450965 0.9177851471991398 0.6545834570914744 0.4133433697209277 1.0 9.55974085496829 -11.1986717174424 1.6395323857325848 0.999843149008623 0.8132735531274292 0.0 0.20253424793557304 0.41568041566033975 2.0131420807421607 0.08218054003914686 0.017235429619767532 6.328900712809576e-12 11.1986717174424 -0.18656959588119382 (ac)S(ph)QGDSNPAAIPHAAEDIQGDDR ddPTM_A549_MK2206_60min_R1 2 SQGDSNPAAIPHAAEDIQGDDR 22 0 P68402-3;P68402-2;P68402-4;P68402 P68402-3 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta 1 S(0.5)QGDS(0.5)NPAAIPHAAEDIQGDDR;S(0.5)QGDS(0.5)NPAAIPHAAEDIQGDDR 100.4 8.827899999999998e-64 29732000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)QGDSNPAAIPHAAEDIQGDDR ddPTM_A549_PD325901_60min_R1 2 SQGDSNPAAIPHAAEDIQGDDR 22 0 P68402-3;P68402-2;P68402-4;P68402 P68402-3 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta 1 S(0.5)QGDS(0.5)NPAAIPHAAEDIQGDDR;S(0.928)QGDS(0.072)NPAAIPHAAEDIQGDDR 95.654 2.5222999999999994e-98 37515000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)QGPPTGESSEPEAK ddPTM_A549_MK2206_60min_R1 2 SQGPPTGESSEPEAK 15 0 Q9UPR3 Q9UPR3 SMG5 Protein SMG5 1 S(1)QGPPTGESSEPEAK;S(1)QGPPTGESSEPEAK 113.22 1.7349e-07 7336200.0 1331.54 1532.52 1445.4099999999999 1421.0 2114.3999999999996 1331.88 1605.75 1858.87 2443.1 1648.63 2236.3 True False 1556.2713989725444 1610.5187220778334 1650.3908724672806 1769.145063791114 1803.3745609287425 1472.8186575696095 1897.4939898353346 2122.370515050621 1889.74175082902 1276.2033379767379 1680.964991259846 0.9258202324643021 0.9580917689849003 0.9818115671941205 1.0524580065556146 1.072821010732147 0.8761744981171585 1.1288123189366392 1.26259055131181 1.1242005399605024 0.7592087548594642 1.0 10.715073963155413 -7.787911339553122 24.996844107289583 1.083463837824449 0.9848505366528243 0.06303759742939286 0.1265772718973061 268.893473176752 253908.74853309366 0.014677170471883307 0.020282600493379363 1.629628684484034e-08 7.787911339553122 -0.0986133011716247 (ac)S(ph)QGPPTGESSEPEAK ddPTM_A549_PD325901_60min_R1 2 SQGPPTGESSEPEAK 15 0 Q9UPR3 Q9UPR3 SMG5 Protein SMG5 1 S(1)QGPPTGESSEPEAK;S(0.999)QGPPT(0.001)GESSEPEAK 106.49 4.3470999999999994e-06 7862400.0 1427.92 1114.8400000000001 1080.8 1144.71 1480.3899999999999 1275.79 1220.23 1124.53 1400.3 1259.8 1391.32 True False 1572.8813872208539 1208.79147933132 1154.1495873783747 1215.4161368749644 1376.4125134682474 1265.4003892268263 1266.6665203854761 1102.1003669732809 1341.450260674421 1180.2560130011861 1220.1964603041513 1.2890394607674824 0.9906531600903117 0.9458719353198963 0.9960823329810388 1.128025328909049 1.037046435056374 1.0380840803863187 0.9032155089997284 1.0993723587265984 0.9672671995024397 1.0 10.252897735309263 -5.255916920479238 24.45692468580396 1.0305306931230838 1.2890396121383612 0.5941580127670719 0.06426610513821482 248.4818531195813 1100387.3928561711 0.008936943028702161 0.10621928228368334 5.547318217111804e-06 5.255916920479238 0.2585089190152774 (ac)S(ph)QKQEEENPAEETGEEK ddPTM_A549_MK2206_60min_R1 2 SQKQEEENPAEETGEEK 17 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 S(1)QKQEEENPAEETGEEK;S(1)QKQEEENPAEETGEEK 111.12 4.3979999999999996e-30 11126200.0 2166.94 2951.9 2413.23 1929.53 3514.2 2695.8 3140.1 2910.1000000000004 3852.5 3541.0 3585.0 True False 2532.6664954034923 3102.139101415678 2755.4623014675535 2402.264936619894 2997.265835232589 2981.067766672788 3710.6155238872384 3322.6155868074784 2979.914901178339 2741.0856406686944 2694.745559033469 0.9398536670422755 1.151180708329409 1.0225315307527074 0.8914626201226657 1.1122630205976203 1.1062520380373184 1.3769817753102205 1.2329978894182534 1.1058242182416482 1.017196459042258 1.0 11.395933343150013 -5.24167000394593 22.607597463559667 1.0832552075445323 0.9398531842447826 0.10894452697401591 0.12319927192142693 2340.1891158398967 2676003.0735341473 0.0179757294222358 0.8009824531309921 5.732314320077242e-06 5.24167000394593 -0.14340202329974971 (ac)S(ph)QKQEEENPAEETGEEK ddPTM_A549_PD325901_60min_R1 3 SQKQEEENPAEETGEEK 17 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.998)QKQEEENPAEET(0.002)GEEK;S(1)QKQEEENPAEETGEEK;S(1)QKQEEENPAEETGEEK 73.92699999999999 1.2135999999999998e-10 19892600.0 3946.62 2993.0699999999997 2897.96 3530.45 3795.96 3279.69 3489.94 3595.0 3498.8 3786.79 3186.6400000000003 True False 4347.277957051915 3245.306513080077 3094.632992449145 3748.5178782663056 3529.34486495108 3252.981292017754 3622.751576468447 3523.2949047770594 3351.7576034047484 3547.6914331423777 2794.70348177531 1.5555417543940462 1.1612346476981255 1.1073206916689808 1.341293594369122 1.2628691694723533 1.1639808349010705 1.2962919322543396 1.260704374454394 1.1993249463716182 1.2694339332517448 1.0 11.448479505810868 -14.999999905689776 0.1547848932589978 0.013728398695102405 1.329165934448225 0.0 0.13783050393795418 38.72900861154968 0.3908671660549128 11.504441993712465 0.18592025894903708 1.0000002171573386e-15 14.999999905689776 1.3154375357531225 (ac)S(ph)QKQEEENPAEETGEEKQDTQEK ddPTM_A549_MK2206_60min_R1 2 SQKQEEENPAEETGEEKQDTQEK 23 2 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.999)QKQEEENPAEET(0.001)GEEKQDTQEK;S(1)QKQEEENPAEETGEEKQDTQEK 62.663000000000004 1.355e-10 39598000.0 0.0 1888.1 1845.53 1419.8000000000002 2203.5299999999997 1367.03 1841.61 1679.98 2505.8 2162.43 2750.93 True False 0.0 1984.196225272855 2107.253905026631 1767.651063737244 1879.3936559985407 1511.6882072389271 2176.2066988140423 1918.1223097229745 1938.2403009403465 1673.9355611271405 2067.798159194404 0.0 0.9595695868333108 1.0190810431167028 0.8548470051960513 0.9088864150699969 0.7310617820783183 1.0524270413616545 0.9276158319389636 0.9373450171246249 0.8095256075570215 1.0 11.013879653612424 -5.261047451839913 24.99999999999091 0.9488530635226576 1.3726536054262672e-05 0.8877462848901383 0.09354313849620081 6.143766795164917 391751.60894838977 0.01125194443735973 0.0914495215888402 5.482170624109596e-06 5.261047451839913 -0.9488393369866034 (ac)S(ph)QKQEEENPAEETGEEKQDTQEK ddPTM_A549_PD325901_60min_R1 2 SQKQEEENPAEETGEEKQDTQEK 23 2 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.999)QKQEEENPAEET(0.001)GEEKQDTQEK;S(0.998)QKQEEENPAEET(0.002)GEEKQDTQEK 68.375 2.5435e-33 49093000.0 0.0 2916.8 2650.1 2892.0 2907.8 2056.7200000000003 2996.1 2797.7 2251.85 2532.1000000000004 2593.0 True False 0.0 3162.608972510491 2829.9517223458843 3070.632271791456 2703.566159365418 2039.9707542233434 3110.118225028829 2741.8976787468087 2157.2125755193147 2372.222773869111 2274.0774383812955 0.0 1.390721757813867 1.244439470082542 1.3502760372035325 1.188862838940892 0.8970542162695256 1.3676395414408724 1.2057186938622948 0.9486099897525188 1.0431583084337164 1.0 11.151065667329568 -8.780168749739435 24.491459841019978 0.9757324786374627 1.112437728910827 0.0036991395895672463 0.3718360108244536 622.42523474267 813910.3854368081 0.059883496714061214 0.06380954435709837 1.6589421825613154e-09 8.780168749739435 0.13670525027336422 (ac)S(ph)REMQDVDLAEVKPLVEK ddPTM_A549_PD325901_60min_R1 1 SREMQDVDLAEVKPLVEK 18 2 Q92597;E5RJ98;E5RI76;E5RIR1;E5RGM5;E5RIM2 Q92597 NDRG1 Protein NDRG1 1 S(1)REMQDVDLAEVKPLVEK 55.864 0.00028594 4368100.0 2063.7 2136.8 2130.1 2209.7 2840.5 1811.7 1976.9 2264.9 2385.0 2438.5 2644.4 True False 2273.205304784356 2316.8756351002517 2274.661395331862 2346.1881504071866 2640.993079193022 1796.9461158672204 2052.132011301188 2219.724792720322 2284.766744060914 2284.532693842987 2319.1555642327435 0.9801866420014868 0.9990169141011263 0.9808144957642797 1.01165621944097 1.1387735777296826 0.774827762130615 0.8848617328437405 0.9571263036227945 0.9851718355153952 0.9850709150676528 1.0 11.179383880937396 -4.823672813342459 14.037384102730176 0.9803270025964378 0.9396296003219702 0.0 0.08461206629743524 309649.0996217573 3575709.663043779 0.011079646863253724 464848.8053947704 1.5008150864437128e-05 4.823672813342459 -0.04069740227446761 (ac)S(ph)S(ph)SSSSPRETYEEDREYESQAK ddPTM_A549_PD325901_60min_R1 1 SSSSSSPRETYEEDREYESQAK 22 2 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 2 S(0.316)S(0.316)S(0.316)S(0.316)S(0.316)S(0.316)PRET(0.054)Y(0.051)EEDREYESQAK 45.696000000000005 0.0061137 1522600.0 635.88 574.76 540.61 582.59 650.79 589.85 532.68 304.89 502.11 623.18 515.46 True False 700.4340694898851 623.1970423203958 577.2990455520203 618.5752611421113 605.0807555036179 585.0464571641445 552.9514288936805 298.8087297684219 481.00806283456006 583.8323084474357 452.06168777015955 1.549421436142593 1.3785663752979795 1.2770359912595266 1.368342591015171 1.3384915640346353 1.2941739434941852 1.2231769332658335 0.660991050231057 1.0640319138902956 1.2914881403183007 1.0 8.820375844201983 -8.018159565448853 12.566130658093746 1.0004627102923 1.3541209421293003 0.5556836133562009 0.15156771586275364 0.6007473872794357 415.2674924615046 0.019629077513865854 0.025819693467679677 9.590481999767235e-09 8.018159565448853 0.3536582318370003 (ac)S(ph)SAPTTPPSVDKVDGFSR ddPTM_A549_MK2206_60min_R1 1 SSAPTTPPSVDKVDGFSR 18 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.473)S(0.473)APT(0.046)T(0.008)PPSVDKVDGFSR 124.12 2.1844e-23 8910100.0 1610.8 1784.0 1576.8 1315.6 2150.2 1787.3 1644.1 1556.1 2935.6 2590.3 3295.0 True False 1882.6636597210565 1874.7979799199063 1800.4139501639052 1637.9220590595278 1833.9084283527166 1976.430899686279 1942.8116884248939 1776.681940356385 2270.6912871899117 2005.1494309585191 2476.760562626299 0.7601314750121522 0.7569556816311361 0.7269228916721722 0.6613162708480442 0.740446394385448 0.7979902980974947 0.7844164340071621 0.7173410167967278 0.9167988708533552 0.8095854969655628 1.0 11.27423868945616 -8.895340024086233 2.647314577038222 0.9673510930469165 0.7425745191628718 0.5495471451540548 0.06100591791676179 0.0716230131839836 0.9722453885095712 0.008266534049942917 0.008602991863697044 1.27250640187404e-09 8.895340024086233 -0.2247765738840447 (ac)S(ph)SDASQGVITTPPPPSMPHK ddPTM_A549_MK2206_60min_R1 1 SSDASQGVITTPPPPSMPHK 20 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 S(0.307)S(0.307)DAS(0.307)QGVIT(0.014)T(0.066)PPPPSMPHK 62.891000000000005 9.4772e-15 3585500.0 1454.8 1642.8 1138.0 1119.3 1886.4 1652.7 1724.0 1730.0 1970.1 2004.2 2108.6 True False 1700.3346735548744 1726.4115030338683 1299.385511977754 1393.528550247287 1608.91305889897 1827.587617026529 2037.2284841825428 1975.2327979027996 1523.8754956032308 1551.4498280226483 1584.9764256005492 1.072782311516473 1.0892348145681279 0.8198137782935261 0.879210900388804 1.0151022014660886 1.1530692744114817 1.2853367730126553 1.246222193591543 0.9614499439799761 0.978847257892055 1.0 10.630245667031748 -3.903965673980056 17.01589446317729 1.021712697525029 1.0672980479101764 0.0 0.1386225024698078 0.0 0.0 0.019535915688379514 0.0 0.0001247482109563266 3.903965673980056 0.04558535038514733 (ac)S(ph)SILPFTPPVVK ddPTM_A549_PD325901_60min_R1 1 SSILPFTPPVVK 12 0 K7EJX0;B7Z5N5;Q15796-2;Q15796;K7ESI8;K7EL92;K7ERC7 K7EJX0 SMAD2 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2 1 S(0.406)S(0.406)ILPFT(0.187)PPVVK 66.289 0.0014547 45851000.0 646.57 611.79 457.55 574.56 1011.6 949.92 1056.0 623.32 1053.1 711.05 766.66 True False 712.2093104203232 663.3476903771914 488.6020944716649 610.0492662795643 940.5487058305451 942.1841664649726 1096.1866578653733 610.8873936149195 1008.8418692538983 666.1541816514477 672.3656802581586 1.0592588695884453 0.9865876707485952 0.726691008803518 0.9073176757703226 1.3988648341917396 1.401297231743321 1.6303429667089584 0.9085642107437217 1.5004362936349573 0.9907617256664173 1.0 9.393102276358043 -6.748500136763876 24.858250043088955 1.268562792845874 0.9109173263223972 0.34600237250129406 0.22559602271775092 199.97471493782197 384179.27852871653 0.034764164616839385 0.0720027251410248 1.7844314266041533e-07 6.748500136763876 -0.35764546652347684 (ac)S(ph)SMNPEYDYLFK ddPTM_A549_MK2206_60min_R1 2 SSMNPEYDYLFK 12 0 P62820;E7END7;P62820-3;P62820-2 P62820 RAB1A Ras-related protein Rab-1A 1 S(0.499)S(0.499)MNPEY(0.001)DYLFK;S(0.499)S(0.499)MNPEY(0.001)DYLFK 75.682 0.0001054 1688660.0 1170.83 1401.31 1225.9099999999999 968.38 1486.0900000000001 1455.65 1113.4099999999999 1342.8600000000001 1854.72 1900.8000000000002 1445.67 True False 1368.437479954808 1472.630693521055 1399.7624718705176 1205.6331434722306 1267.4881296115188 1609.6859168177316 1315.702184787519 1533.2145173362733 1434.6288813792312 1471.4079598370663 1086.670240537772 1.2592941528219221 1.3551771628459048 1.288120737692975 1.1094747040055004 1.1663962831854708 1.4813011866609407 1.210764899696161 1.4109289645932652 1.3202062850909224 1.3540519514999279 1.0 10.08569849318039 -10.670160751615356 0.9152858796709071 0.9983097999358547 1.2890332036157832 0.0 0.14396553123817762 0.3699093570940775 0.5469509968337549 0.0710868287542686 0.018461579486845084 2.1371708815180846e-11 10.670160751615356 0.29072340367992855 (ac)S(ph)SMNPEYDYLFK ddPTM_A549_PD325901_60min_R1 2 SSMNPEYDYLFK 12 0 P62820;E7END7;P62820-3;P62820-2 P62820 RAB1A Ras-related protein Rab-1A 1 S(0.5)S(0.5)MNPEYDYLFK;S(0.5)S(0.5)MNPEYDYLFK 101.32 8.9808e-06 4059100.0 2993.8 1996.54 2923.4 2400.1 3004.6 2791.5 2519.8 2846.7 2762.7 2782.3 3132.1000000000004 True False 3297.7283720809232 2164.795432657739 3121.7995038322915 2548.3487259774133 2793.5672613072893 2768.766949518874 2615.6923678874664 2789.92033530705 2646.5933265480444 2606.625103169711 2746.8715560177648 1.2005397066551429 0.7880948884978511 1.1364927118609334 0.9277276618175199 1.0169995954806206 1.007971029243483 0.9522441492238999 1.0156719301981834 0.9634936590864491 0.9489432068489676 1.0 11.423573736092024 -5.206265914017712 23.10845028878164 0.9833687381161358 1.2005434176674445 0.3922134299455602 0.0799318115841698 18889.792946622474 7911003.768841376 0.008962706494277555 17.709848535136707 6.219193737693201e-06 5.206265914017712 0.21717467955130876 (ac)S(ph)SPASTPSR ddPTM_A549_MK2206_60min_R1 1 SSPASTPSR 9 0 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53;A0A3B3IS88 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.499)S(0.499)PAS(0.002)TPSR 58.981 0.0032724000000000004 3404200.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)SPASTPSR ddPTM_A549_PD325901_60min_R1 3 SSPASTPSR 9 0 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53;A0A3B3IS88 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.499)S(0.499)PAS(0.002)TPSR;S(0.499)S(0.499)PAS(0.002)TPSR;S(0.5)S(0.5)PAS(0.001)TPSR 69.825 0.0011836 13808600.0 404.88 378.45000000000005 341.02 295.41 289.12 311.68 313.31 441.78999999999996 331.63 421.46000000000004 556.59 True False 445.9831195430974 410.34330967039045 364.1636679198496 313.6568047752126 268.8132086098526 309.1417814171748 325.2331834998105 432.9781518724497 317.69274437439026 394.8489436731866 488.1329585147114 0.913650905483073 0.8406384008958975 0.7460337630712851 0.6425642835706198 0.5506966983499663 0.633314706627944 0.6662799096570501 0.8870086404120581 0.6508323989043153 0.8088962992268154 1.0 8.93113035490613 -10.865013200734042 0.8987013969062253 1.0162053764798555 0.7168020743523711 0.18276027451534782 0.12212264474411781 0.5050348988096164 0.656266649254215 0.10671249541018732 0.020791529185375485 1.3645416596048726e-11 10.865013200734042 -0.29940330212748445 (ac)S(ph)SPASTPSRR ddPTM_A549_MK2206_60min_R1 2 SSPASTPSRR 10 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53;A0A3B3IS88 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.5)S(0.5)PASTPSRR;S(0.5)S(0.5)PASTPSRR 95.90899999999999 5.5163e-05 126658000.0 0.0 116.45 135.78 94.22399999999999 429.27 0.0 0.0 0.0 0.0 417.76 227.37 True False 0.0 122.37680760183468 155.03564570855846 117.3088842298761 366.1249516505305 0.0 0.0 0.0 0.0 323.3877258530793 170.90775390723564 0.0 0.7160401140621021 0.9071305553094323 0.6863871389565412 2.1422372202565705 0.0 0.0 0.0 0.0 1.892177028015978 1.0 7.417074041848766 (ac)S(ph)SPASTPSRR ddPTM_A549_PD325901_60min_R1 2 SSPASTPSRR 10 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53;A0A3B3IS88 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.5)S(0.5)PASTPSRR;S(0.5)S(0.5)PASTPSRR 94.302 2.5404e-07 201712000.0 273.22 0.0 150.43 0.0 0.0 155.69 0.0 0.0 0.0 389.0 144.96 True False 300.9570932660667 0.0 160.6390844090756 0.0 0.0 154.42211225885504 0.0 0.0 0.0 364.43847361284486 127.13083897715109 2.367302030628123 0.0 1.263572911982016 0.0 0.0 1.2146707557448664 0.0 0.0 0.0 2.866640986128822 1.0 6.990170226747785 -5.253028473922922 24.822680028314906 0.4517652274778604 2.3673030884231987 0.2179267078854028 0.884091425154562 603.880385047932 1782157.852335451 0.0727410663582397 1.150308427425072 5.584335806036516e-06 5.253028473922922 1.9155378609453382 (ac)S(ph)SPPEGK ddPTM_A549_MK2206_60min_R1 2 SSPPEGK 7 0 P51397;B4DQ75 P51397 DAP Death-associated protein 1 1 S(0.5)S(0.5)PPEGK;S(0.5)S(0.5)PPEGK 59.205 0.009853 4849600.0 1424.3 1410.0 1247.2 1423.2 1503.0 1100.1 1270.3 1061.5 1552.0 2137.9 1973.2 True False 1664.6870192082815 1481.7629774030645 1424.0717140058475 1771.8840638898764 1281.9106910120602 1216.5118518127204 1501.097066970465 1211.9708757074113 1200.4744780347253 1654.946905163966 1483.1999824504433 1.1223618115596237 0.999031145452817 0.9601346621195963 1.194635979540998 0.8642871535732987 0.8201940845514852 1.0120665350133389 0.8171324771087676 0.8093813998375203 1.1157948521748051 1.0 10.534497416667875 -6.788903724306929 24.999939612162713 0.8992172728621576 1.0562612889339429 0.29279546377328936 0.10791564746962598 173.16840205112922 157629.3515227068 0.01409684603325873 0.02664487907134981 1.6259091521811788e-07 6.788903724306929 0.1570440160717853 (ac)S(ph)SPPEGK ddPTM_A549_PD325901_60min_R1 2 SSPPEGK 7 0 P51397;B4DQ75 P51397 DAP Death-associated protein 1 1 S(0.5)S(0.5)PPEGK;S(0.5)S(0.5)PPEGK 59.205 0.009853 14815000.0 2847.4 2815.1 2853.3 2739.8 3576.7 2930.1 2507.2 2507.3 2451.5 3263.3 3546.6 True False 3136.4659518549106 3052.338356594311 3046.9420962867503 2909.031223462737 3325.4849309451433 2906.238237071559 2602.612867992484 2457.2899345612013 2348.471980320891 3057.2546810817385 3110.3906837497534 1.0083832774581623 0.981336001468003 0.9796010874793026 0.9352623252959766 1.0691534501820463 0.9343643717347826 0.8367478984520639 0.7900261363948011 0.7550408354135353 0.9829166146408475 1.0 11.60288008756096 -7.536949155983953 6.343863544742272 0.8700158565439577 0.9911416741394922 0.38068967668666254 0.07393138585893223 0.16701511672428848 27.152233014492104 0.014811209547012214 0.022430753525307694 2.904362656062336e-08 7.536949155983953 0.12112581759553442 (ac)S(ph)SPPEGKLETK ddPTM_A549_MK2206_60min_R1 4 SSPPEGKLETK 11 1 P51397;B4DQ75 P51397 DAP Death-associated protein 1 1 S(0.557)S(0.443)PPEGKLETK;S(0.978)S(0.022)PPEGKLETK;S(0.5)S(0.5)PPEGKLETK;S(0.887)S(0.113)PPEGKLETK 109.66 2.8267e-12 495458000.0 61203.0 86439.0 82581.0 82718.0 112781.0 83439.0 77345.0 72746.0 138539.0 144164.0 154906.0 True False 71532.57013031289 90838.37588917975 94292.22756119054 102983.91371335197 96191.06430008709 92268.4595976745 91397.58533010368 83057.9682752815 107160.13770132263 111597.25227375356 116438.56501189352 0.6143374415770776 0.7801399465881527 0.8098023842148788 0.8844484961046434 0.8261100116637623 0.7924218199378343 0.78494256023138 0.7133200951660441 0.9203148260232926 0.9584217416485213 1.0 16.829209439355527 -14.99999942702019 0.04502495606767061 2.0260217229305715 0.26858944293751563 0.5300439452227328 0.07243195298926658 232.95460331632145 0.8034663674736158 29.796743022835564 8.050982540634662 1.000001319335638e-15 14.99999942702019 -1.757432279993056 (ac)S(ph)SPPEGKLETK ddPTM_A549_PD325901_60min_R1 2 SSPPEGKLETK 11 1 P51397;B4DQ75 P51397 DAP Death-associated protein 1 1 S(0.981)S(0.019)PPEGKLETK;S(0.983)S(0.017)PPEGKLETK 117.31 1.5565999999999999e-15 1125970000.0 79286.0 85592.0 81002.0 86292.0 92987.0 101049.0 90486.0 99024.0 94737.0 96312.0 107918.0 True False 87335.0563527317 92805.13822515006 86499.2828245958 91622.06085664881 86455.91390773511 100226.09044668928 93929.4942458392 97048.8886371749 90755.53334679193 90230.8438832912 94644.77014856641 0.922766849300173 0.9805627725596604 0.9139362131559469 0.9680625851045676 0.9134779848059535 1.058971248906429 0.9924425205787449 1.025401493234488 0.9589070077969502 0.9533632311817488 1.0 16.5302351676846 -7.2176374888185935 24.999992104335824 0.989762885167013 0.9421656041288254 0.41287891138896193 0.033831269643060234 420.9913791732852 240281.41928304764 0.0048009482131769424 0.008315446688672918 6.058463714990325e-08 7.2176374888185935 -0.04759728103818761 (ac)S(ph)SSGTPDLPVLLTDLK ddPTM_A549_PD325901_60min_R1 2 SSSGTPDLPVLLTDLK 16 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 S(0.25)S(0.25)S(0.25)GT(0.25)PDLPVLLTDLK;S(0.25)S(0.25)S(0.25)GT(0.25)PDLPVLLTDLK 147.72 1.1281999999999998e-34 202364000.0 42137.0 44814.0 43872.0 46023.0 53609.0 50143.0 50211.0 50628.0 52077.0 54543.0 53274.0 True False 46414.717220380124 48590.63305474667 46849.417743767655 48865.73618418332 49843.68878100994 49734.652032858685 52121.807081513456 49618.18482310233 49888.384792645746 51099.14567163336 46721.63573171045 0.9934309125414028 1.0400028229698242 1.0027349644346994 1.0458909543489645 1.0668224260646022 1.0644886732658478 1.1155818126919272 1.0619958836207004 1.067779070902391 1.0936934221451466 1.0 15.511803163628613 -6.278101394325973 21.970473689260256 1.0463080640717974 1.014850900603736 0.21874153164286692 0.032871031844437654 271.01229045150495 357356.96073407814 0.005407152724804719 0.012614950504775737 5.271067839287798e-07 6.278101394325973 -0.03145716346806138 (ac)S(ph)SSPVKR ddPTM_A549_PD325901_60min_R1 1 SSSPVKR 7 1 P37837;F2Z393;E9PM01;E9PKI8 P37837 TALDO1 Transaldolase 1 S(0.462)S(0.462)S(0.075)PVKR 43.0 0.0098971 295640000.0 3790.4 3908.6 3477.2 3688.3 3670.5 4149.5 3629.6 3584.6 3848.0 4219.9 4008.4 True False 4175.198617655 4237.991439232895 3713.183702102224 3916.1179142629458 3412.6967425375797 4115.707847762338 3767.7264141933297 3513.1023409357017 3686.281941780458 3953.4547938273627 3515.3922113411463 1.1876906947069024 1.205552946712615 1.056264416278495 1.1139917479560324 0.9707869100715827 1.1707677551553108 1.0717798150767126 0.9993486159529917 1.0486118532913618 1.1246127191933137 1.0 11.77946994402826 -2.0000000000000053 0.2551237766058103 1.0130952885114939 2.260542682252711 0.30276499760151376 0.06406669030029205 25.52017136936104 0.31158788940223875 0.023595116881936506 13.979169480342465 0.009999999999999877 2.0000000000000053 1.247447393741217 (ac)S(ph)SSPVNVK ddPTM_A549_MK2206_60min_R1 4 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.333)S(0.333)S(0.333)PVNVK;S(0.333)S(0.333)S(0.333)PVNVK;S(0.333)S(0.333)S(0.333)PVNVK;S(0.521)S(0.069)S(0.409)PVNVK 73.975 8.1233e-05 1525930000.0 14355.3 14644.4 12126.5 12707.099999999999 16779.2 14039.5 12110.9 13585.4 19255.2 18792.6 19637.0 True False 16778.123686611412 15389.737408710245 13846.22004481392 15820.340070443386 14311.001907271839 15525.150571334154 14311.29376397119 15511.172053542597 14893.927944235988 14547.338607972471 14760.590946371045 1.136683737634257 1.0426233925609787 0.9380532320908244 1.0717958466515791 0.9695412574786012 1.0517973587738423 0.9695610301760773 1.0508503426386249 1.0090333102752722 0.9855525880248716 1.0 13.849462860997386 -5.3337597207467145 3.653433054105388 1.0068208856771503 1.1424441807179448 0.49102486036763127 0.03864853794802559 0.12395751567229853 2.7753726365057925 0.004378306059948495 0.03928353746080625 4.637033989109589e-06 5.3337597207467145 0.1356232950407945 (ac)S(ph)SSPVNVK ddPTM_A549_PD325901_60min_R1 5 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.333)S(0.333)S(0.333)PVNVK;S(0.333)S(0.333)S(0.333)PVNVK;S(0.333)S(0.333)S(0.333)PVNVK;S(0.687)S(0.206)S(0.107)PVNVK;S(0.782)S(0.03)S(0.188)PVNVK 81.297 9.724500000000001e-07 3874860000.0 31011.1 29013.8 27852.9 28590.4 35265.1 28021.4 29113.3 30328.2 27677.9 30929.3 34126.3 True False 34159.32404283477 31458.894749939966 29743.16528709395 30356.364074490484 32788.20103399044 27793.203008865545 30221.222562909028 29723.280258987354 26514.694115489947 28976.41871957265 29928.981444439505 1.1413460263005784 1.0511181213547347 0.9937914306341996 1.0142798922457277 1.0955334746308965 0.9286384523463037 1.0097644859385557 0.9931270235228681 0.8859203633345197 0.9681725645546875 1.0 14.869255560822468 -2.0000000537281686 0.33022175471847987 0.9504784396329481 2.8061775630251073 0.47956876804117377 0.048936272888232525 33.29314861902534 0.41404183789646964 0.01648028349774947 38.33004588527547 0.009999998762863276 2.0000000537281686 1.8556991233921591 (ac)S(ph)SSPVNVKK ddPTM_A549_MK2206_60min_R1 1 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.41)S(0.272)S(0.317)PVNVKK 88.417 0.0051808 7992400000.0 29779.0 31649.0 32023.0 28374.0 38979.0 27212.0 27829.0 25231.0 43800.0 43360.0 44914.0 True False 34804.96717335072 33259.7989161912 36564.34292624221 35325.63127375725 33245.240735169056 30091.555778136302 32885.169075589314 28807.57151669683 33879.36993422746 33564.94588517216 33760.61423666088 1.0309340620810084 0.9851656928704265 1.0830473246110772 1.0463562963080486 0.98473447497492 0.8913213357788876 0.9740690392972498 0.853289318575682 1.003517581070478 0.9942042419572971 1.0 15.043053532057913 -6.800154313021281 7.423528032794721 0.9786124807924951 1.0360377100636964 0.3007854607435333 0.051897175131646815 0.2703972462710128 41.767475840053564 0.00816384890940049 0.015626258529340274 1.5843301500505716e-07 6.800154313021281 0.057425229271201306 (ac)S(ph)SSPVNVKK ddPTM_A549_PD325901_60min_R1 2 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.354)S(0.354)S(0.293)PVNVKK;S(0.373)S(0.373)S(0.253)PVNVKK 78.49600000000001 0.0067532 7935606000.0 37053.8 46185.0 41847.6 56891.0 46845.0 43717.1 43650.0 44013.2 62972.0 47999.0 49728.0 True False 40815.47449843417 50077.17203627158 44687.62978606153 60405.02786116451 43554.76880647675 43361.082431958326 45311.124636196495 43135.322198312526 60325.505831028815 44968.334948439406 43611.77125176444 0.9358820641063245 1.148248984137409 1.024668994251261 1.3850624757351642 0.9986929573449649 0.9942518083395668 1.0389654750462194 0.989075218919648 1.3832390682501383 1.0311054483167794 1.0 15.412429964883986 (ac)S(ph)SSSSSPRETYEEDREYESQAK ddPTM_A549_MK2206_60min_R1 2 SSSSSSPRETYEEDREYESQAK 22 2 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 S(0.201)S(0.201)S(0.201)S(0.132)S(0.132)S(0.132)PRETYEEDREYESQAK;S(0.167)S(0.167)S(0.167)S(0.167)S(0.167)S(0.167)PRETYEEDREYESQAK 149.36 1.9264e-74 63160000.0 5161.7 5570.2 5147.5 6034.1 7001.9 5709.5 5905.8 5913.700000000001 8760.4 10642.7 10419.4 True False 6032.868768551139 5853.699387752168 5877.492902377406 7512.454770881039 5971.929785360844 6313.675500340634 6978.807414086572 6751.985084946695 6776.183387484154 8238.506678323842 7831.975419189208 0.7702869896360938 0.7474103370408895 0.7504483336320102 0.9592030578230227 0.7625061961671833 0.8061408728213612 0.8910660517380736 0.8621049892985597 0.8651946699017662 1.0519066055976871 1.0 12.93516052168369 -14.999999988197596 0.07894562688549346 1.6194278921542076 0.6326327327159359 0.6822770287162632 0.056977147212636754 71.5274642407158 0.418065288391232 7.739329594613026 0.8190401544580601 1.0000000271760407e-15 14.999999988197596 -0.9867951594382717 (ac)S(ph)TGGDFGNPLR ddPTM_A549_MK2206_60min_R1 2 STGGDFGNPLR 11 0 P20340-2;P20340;F5H3K7;F5GX61;P20340-3 P20340-2 RAB6A Ras-related protein Rab-6A 1 S(0.5)T(0.5)GGDFGNPLR;S(0.5)T(0.5)GGDFGNPLR 67.993 9.1615e-05 1120870.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)TGGDFGNPLR ddPTM_A549_PD325901_60min_R1 2 STGGDFGNPLR 11 0 P20340-2;P20340;F5H3K7;F5GX61;P20340-3 P20340-2 RAB6A Ras-related protein Rab-6A 1 S(0.5)T(0.5)GGDFGNPLR;S(0.5)T(0.5)GGDFGNPLR 66.62100000000001 5.9426e-06 1934130.0 0.0 0.0 0.0 89.124 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 94.6289870647102 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)S(ph)TGGDFGNPLRK ddPTM_A549_MK2206_60min_R1 1 STGGDFGNPLRK 12 1 P20340-2;P20340;F5H3K7;F5GX61;P20340-3 P20340-2 RAB6A Ras-related protein Rab-6A 1 S(0.929)T(0.071)GGDFGNPLRK 60.891999999999996 0.0020448 10850000.0 4538.3 5328.8 4436.1 4320.3 6225.6 4934.8 4830.0 4038.3 6509.8 6568.3 6839.4 True False 5304.254089217825 5600.013158854929 5065.2056851357775 5378.773693945639 5309.822487002453 5456.997260544873 5707.548479467329 4610.741391775073 5035.3406940144705 5084.51646811753 5140.9882221627595 1.0317576815973295 1.0892872959158546 0.9852591498458829 1.0462528723092164 1.0328408192245706 1.0614685396515404 1.1102045429441236 0.8968589680673072 0.9794499571711051 0.9890153893366688 1.0 12.327829991586576 -8.247433818144076 24.999988808868938 0.9830169008413734 1.0494738955624046 0.48886686663696877 0.04034166426063767 614.1863721369675 1096327.0046580858 0.006348821618717917 0.008176820654945148 5.6567395321010195e-09 8.247433818144076 0.06645699472103117 (ac)S(ph)TGGDFGNPLRK ddPTM_A549_PD325901_60min_R1 3 STGGDFGNPLRK 12 1 P20340-2;P20340;F5H3K7;F5GX61;P20340-3 P20340-2 RAB6A Ras-related protein Rab-6A 1 S(0.794)T(0.206)GGDFGNPLRK;S(0.848)T(0.152)GGDFGNPLRK;S(0.829)T(0.171)GGDFGNPLRK 81.95 6.4455e-14 16729200.0 8184.5 9315.9 9090.099999999999 8447.4 10994.3 9041.6 9499.7 9138.8 9394.4 9817.599999999999 10127.3 True False 9015.38441488955 10100.983587153887 9707.008849211845 8969.176712562643 10222.09829627596 8967.968207332922 9861.216281935303 8956.519464750087 8999.586037906009 9197.715060517905 8881.706302244085 1.0150509494568278 1.1372796221151487 1.0929216210132096 1.0098483790548733 1.1509160456806826 1.0097123122689884 1.1102839866978862 1.008423287143271 1.0132721947394432 1.0355797351905203 1.0 13.116621150123658 -8.284803224655604 21.32146186880743 1.0066042027058912 1.0761044771116821 0.27448328630270913 0.04694921603131082 93.87171777242533 85665.35092595748 0.006763652605631826 0.008182145723148097 5.190351563239404e-09 8.284803224655604 0.06950027440579087 (ac)S(ph)TVHEILCK ddPTM_A549_MK2206_60min_R1 2 STVHEILCK 9 0 P07355;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK 64.836 0.00025527 10964500.0 902.1800000000001 1190.51 786.78 618.4000000000001 1236.4099999999999 1034.39 830.95 872.19 1419.29 1397.3600000000001 1397.76 True False 1054.445927816701 1251.1018739206545 898.3572347221941 769.9080277610307 1054.5357268624234 1143.8484632274892 981.9228590089805 995.8256034698518 1097.8230811404037 1081.6954054913322 1050.6576157865047 1.0036056579929327 1.190779807924488 0.8550428048339029 0.7327867958056825 1.0036911273640896 1.0886976366427643 0.9345792999120169 0.9478117214468516 1.0448913753112536 1.0295412979818293 1.0 10.037076890705873 -6.969827211329102 24.999966303641873 1.0139219185723762 0.9455591857651177 0.06521868240500239 0.11062712186926532 456.92654998821973 378589.1005975135 0.016430125087487004 0.031049775555029666 1.0719457053887129e-07 6.969827211329102 -0.06836273280725857 (ac)S(ph)TVHEILCK ddPTM_A549_PD325901_60min_R1 2 STVHEILCK 9 0 P07355;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK 64.836 9.997200000000001e-05 26008000.0 2474.2 2701.6 3218.5 2283.4 1538.93 2363.98 2686.6 2682.8 1747.4499999999998 2401.8 2676.3 True False 2725.378962590229 2929.273313266026 3436.926764412748 2424.440432022341 1430.8408658202854 2344.7285306550702 2788.8400331639314 2629.289449384116 1674.010753421065 2250.1499381062467 2347.132066463503 1.1611527964409103 1.2480223653028835 1.4643090661665548 1.0329373735135923 0.6096124228647167 0.9989759690804044 1.1881905040673588 1.1202136798998907 0.7132154075775331 0.9586805831069478 1.0 11.196683305164639 -6.511781888387828 23.997562094117175 0.8988663896793879 1.2804768755414515 0.4300900132639416 0.17155722307784105 218.4092473100906 472320.67366558005 0.0269738919079746 0.05938792365282468 3.077642081764949e-07 6.511781888387828 0.3816104858620636 (ac)S(ph)VELEEALPVTTAEGMAK ddPTM_A549_PD325901_60min_R1 2 SVELEEALPVTTAEGMAK 18 0 Q92522 Q92522 H1FX Histone H1x 1 S(0.996)VELEEALPVT(0.003)T(0.001)AEGMAK;S(0.999)VELEEALPVT(0.001)TAEGMAK 47.18899999999999 8.459600000000001e-11 8564100.0 2168.7 2063.9 1918.38 2079.3900000000003 2311.3 2114.77 1692.0900000000001 2330.2 2415.1000000000004 2597.9 2354.3 True False 2388.864827487442 2237.83209625768 2048.572802956077 2207.82919766267 2148.9622615521325 2097.5480142697575 1756.4834108971768 2283.7223329934636 2313.601745736484 2433.868150639611 2064.7360251373257 1.1569831680195335 1.083834480056036 0.9921717730574426 1.069303373788825 1.0407927383401008 1.0158916145855736 0.8507060416017844 1.1060601961655476 1.120531495343385 1.178779331114608 1.0 11.011741630680172 -5.397301143759254 3.4516228687194284 1.041181158290492 1.1578401191593617 0.14991111529341639 0.08061351949774802 0.354608007926624 6.82300091438562 0.010383210204714744 0.08497401873576847 4.00588849334363e-06 5.397301143759254 0.11665896086886973 (ac)S(ph)YAEKPDEITKDEWMEK ddPTM_A549_PD325901_60min_R1 1 SYAEKPDEITKDEWMEK 17 2 Q9NWU2 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog 1 S(0.53)Y(0.47)AEKPDEIT(0.001)KDEWMEK 50.07899999999999 0.00042327 4098600.0 3773.9 3210.7 3761.7 3420.2 4243.8 3492.1 3261.3 3469.2 4062.4 3206.0 4162.1 True False 4157.023549801658 3481.276956952629 4016.9915829397055 3631.4579861622224 3945.730128315208 3463.6614954020647 3385.4105561518377 3400.004084465247 3891.6714553765437 3003.5726128606157 3650.188085725721 1.138851876169874 0.953725362965917 1.10048893059741 0.9948687302890654 1.0809662504091835 0.9488994577969613 0.9274619489857765 0.9314599699015967 1.0661564182391472 0.8228542043097083 1.0 11.833755089299293 -5.241215771278738 23.600650579423068 1.0154464509762198 1.1388521312020503 0.1325151350076359 0.08250805865926676 2431.5209521725187 2837455.2005535006 0.00821752687641105 0.42965326910015267 5.7383129377846214e-06 5.241215771278738 0.12340568022583054 (ac)S(ph)YDYHQNWGR ddPTM_A549_MK2206_60min_R1 1 SYDYHQNWGR 10 0 Q9H2U1-3;Q9H2U1-2;Q9H2U1 Q9H2U1-3 DHX36 ATP-dependent RNA helicase DHX36 1 S(0.582)Y(0.409)DY(0.009)HQNWGR 61.961999999999996 0.0012352 1095600.0 386.03 451.78 343.97 233.63 387.91 416.14 258.34 428.91 573.62 440.96 415.76 True False 451.18242647263423 474.7736722916003 392.7501182381265 290.8693604880492 330.84895286126994 460.1756585886245 305.2770339928758 489.709305981786 443.6959858829118 341.34682973997934 312.51531760774185 1.4437129991783073 1.519201285639123 1.2567387776207901 0.9307363322688014 1.058664757279321 1.4724899314094444 0.9768386277182377 1.5669929708739965 1.41975756349909 1.0922563167557302 1.0 8.287783093453923 -10.94217761125763 1.2388461108017677 1.0021285873265386 1.2977604072418376 0.1664453710774093 0.21133130228927516 0.5970151508310401 1.6475035681661387 0.14651352850582486 0.03536395525655858 1.1424110330740793e-11 10.94217761125763 0.29563181991529897 (ac)S(ph)YDYHQNWGR ddPTM_A549_PD325901_60min_R1 1 SYDYHQNWGR 10 0 Q9H2U1-3;Q9H2U1-2;Q9H2U1 Q9H2U1-3 DHX36 ATP-dependent RNA helicase DHX36 1 S(0.582)Y(0.409)DY(0.009)HQNWGR 61.961999999999996 0.0016784000000000002 876030.0 373.15 373.6 281.23 417.22 297.45 206.44 358.33 254.13 214.69 367.35 540.33 True False 411.0319133014888 405.084583149314 300.31595897337183 442.99073182463087 276.5581381467926 204.7588210849639 371.96644423569967 249.06117778887176 205.66732590458588 344.15545830765666 473.8728354340785 0.8673886379770515 0.8548381609134593 0.6337479942235461 0.9348303990011182 0.583612559039091 0.43209655792444834 0.7849499199399556 0.525586526943934 0.43401374910251994 0.7262612088587063 1.0 8.88835615121411 -5.743844944657711 21.784120028719467 0.6959632772365008 0.8611143514216744 0.13455982380646114 0.17637152432941272 120.01731049781826 148582.65743130358 0.03153807594300375 0.12122851128114484 1.8036615838216333e-06 5.743844944657711 0.1651510741851736 (ac)S(ph)YGRPPPDVEGMTSLK ddPTM_A549_MK2206_60min_R1 2 SYGRPPPDVEGMTSLK 16 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.904)Y(0.096)GRPPPDVEGMTSLK;S(0.765)Y(0.235)GRPPPDVEGMTSLK 63.727 0.0001343 7875600.0 4354.200000000001 5457.2 4575.299999999999 3902.9 6084.2 4550.7 4152.200000000001 5185.1 6082.3 6056.5 7417.3 True False 5089.082510030682 5734.948170414186 5224.146338270489 4859.110675207839 5189.222239691004 5032.2520534898185 4906.600993052637 5920.10380370278 4704.668761437251 4688.332443578069 5575.379702934157 0.9127777445099298 1.0286201973645048 0.9370027902352867 0.8715300004859998 0.9307388045625072 0.9025846348799336 0.8800478630128884 1.0618297083133559 0.8438293016996357 0.8408992200317296 1.0 12.44485434563876 -5.782960138921816 0.0029686114486126625 1.8447247572947325 8.863602560005594e-08 0.0 0.07147064783237352 297612.09906402254 152.86041409643923 46583.74107251576 48417.78228566566 1.6483136726210626e-06 5.782960138921816 -1.8447246686587069 (ac)S(ph)YGRPPPDVEGMTSLK ddPTM_A549_PD325901_60min_R1 1 SYGRPPPDVEGMTSLK 16 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.897)Y(0.103)GRPPPDVEGMTSLK 93.01100000000001 2.6172e-08 4555100.0 3579.4 3196.1 3062.5 3385.3 4037.0 3688.6 2405.6 3409.6 3639.4 3189.5 3848.0 True False 3942.7780529849883 3465.446563713924 3270.3396663085414 3594.402292425873 3753.455046893938 3658.561264551434 2497.146424394829 3341.5928532205457 3486.4486743544185 2988.1144256765247 3374.72039448177 1.1683273255562407 1.0268840551592087 0.9690698143929468 1.0650963256995511 1.1122269723534612 1.0841079665544413 0.739956539355995 0.9901836189702135 1.0331074183376325 0.8854405925191875 1.0 11.720552260246317 (ac)S(ph)YTPGVGGDPAQLAQR ddPTM_A549_MK2206_60min_R1 2 SYTPGVGGDPAQLAQR 16 0 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 S(0.355)Y(0.291)T(0.355)PGVGGDPAQLAQR;S(0.359)Y(0.282)T(0.359)PGVGGDPAQLAQR 87.363 4.2788e-06 3153000.0 389.85 496.85 513.61 154.32 438.15 255.65 386.78 561.92 722.86 710.72 860.8399999999999 True False 455.647149082601 522.1375427820661 586.4476210956894 192.12840692768808 373.6987154137952 282.70271331326455 457.05291943858657 641.5738808078269 559.1333641702203 550.1678583835227 647.0696700246503 0.7041701538340422 0.8069263125285645 0.9063129493820171 0.29692074258459505 0.5775246974557763 0.4368968697026008 0.7063426716031598 0.9915066499460342 0.8641007144546272 0.8502451650416003 1.0 9.337777245404824 -8.139761190133578 4.564502128256779 0.9378319616408568 0.6225321880243943 0.43853796859248806 0.16095537549099534 0.16325656623877657 5.420093859303179 0.026898973284797147 0.03502319828839861 7.248344224918187e-09 8.139761190133578 -0.31529977361646255 (ac)S(ph)YTPGVGGDPAQLAQR ddPTM_A549_PD325901_60min_R1 2 SYTPGVGGDPAQLAQR 16 0 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 S(0.368)Y(0.265)T(0.368)PGVGGDPAQLAQR;S(0.369)Y(0.263)T(0.369)PGVGGDPAQLAQR 135.66 5.2509999999999995e-15 5816900.0 565.22 757.3 508.78999999999996 654.49 828.9300000000001 784.52 589.45 587.13 710.54 562.97 693.0699999999999 True False 622.6007183070282 821.1203287445813 543.319549002816 694.916360845363 770.7088164532556 778.1311292267768 611.8818423094166 575.4192315554257 680.6784747694089 527.4239781229389 607.8267837327132 1.0243061592047442 1.3509117247219928 0.8938723391987548 1.1432802558943285 1.2679744247534976 1.2801856549463169 1.006671404889072 0.9466829151912817 1.119856006655889 0.8677208577153935 1.0 9.247516438025853 -11.26981434243563 0.2183714473860481 0.902739228532938 1.1540730435644984 0.18024194191448395 0.14098310716464066 16.041040222600575 0.8385150496891796 1.1010777010052633 0.1332389037215467 5.372614224277948e-12 11.26981434243563 0.2513338150315604 (ac)SAADEVDGLGVARPHYGS(ph)VLDNER ddPTM_A549_PD325901_60min_R1 2 SAADEVDGLGVARPHYGSVLDNER 24 1 P46940;H0YLE8;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(0.003)AADEVDGLGVARPHYGS(0.996)VLDNER;SAADEVDGLGVARPHYGS(0.999)VLDNER 48.088 3.0325e-08 2854400.0 0.0 478.3 175.36 204.301 143.61 98.85799999999999 218.45 414.0 89.934 162.66 392.14 True False 0.0 518.6080195939958 187.26098412534404 216.92020876876435 133.52332902760435 98.0529332242654 226.76323429042677 405.74244522328263 86.15438673390949 152.38961984027077 343.9092659802707 0.0 1.5079791994431089 0.5445069460154842 0.630748369487691 0.3882516181906663 0.28511279841436576 0.6593693648935753 1.1797950371205153 0.2505148748706642 0.4431099563598645 1.0 8.42588417683366 -11.16453591406945 1.5614526297119198 0.9998798696169241 0.5772913661522193 0.0 0.4358531656188885 0.6653867536027339 2.9126534766586873 0.28670466071480694 0.060846805428245346 6.846428640708852e-12 11.16453591406945 -0.4225885034647048 (ac)SAEVPEAASAEEQKEMEDKVT(ph)SPEKAEEAK ddPTM_A549_MK2206_60min_R1 3 SAEVPEAASAEEQKEMEDKVTSPEKAEEAK 30 3 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 S(0.001)AEVPEAAS(0.042)AEEQKEMEDKVT(0.509)S(0.449)PEKAEEAK;SAEVPEAASAEEQKEMEDKVT(0.5)S(0.5)PEKAEEAK;S(0.003)AEVPEAAS(0.003)AEEQKEMEDKVT(0.523)S(0.471)PEKAEEAK 99.25 9.119899999999998e-37 698224000.0 9111.2 10983.400000000001 10142.3 10088.8 14246.5 10976.400000000001 9957.3 10429.3 14701.7 16248.4 14927.4 True False 10648.947812546863 11542.408146105548 11580.63064862212 12560.55645290344 12150.858722224437 12137.915362455366 11766.412520621132 11907.68521339172 11371.788423790682 12577.875154996103 11220.514604718606 0.9490605545015395 1.028687948166974 1.032094432081758 1.1194278422507735 1.082914567671842 1.0817610234517194 1.0486517717888766 1.0612423434112492 1.0134818967223178 1.1209713277951334 1.0 13.453851223112073 -8.84508139601035 4.559167664334166 1.0058227377532654 1.0535019620558503 0.0 0.053423803414190944 0.24813386813510271 9.205031895397616 0.007399170408311956 0.007856003648210095 1.4286261785280941e-09 8.84508139601035 0.04767922430258498 (ac)SAEVPEAASAEEQKEMEDKVT(ph)SPEKAEEAK ddPTM_A549_PD325901_60min_R1 2 SAEVPEAASAEEQKEMEDKVTSPEKAEEAK 30 3 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 S(0.004)AEVPEAAS(0.033)AEEQKEMEDKVT(0.482)S(0.482)PEKAEEAK;SAEVPEAASAEEQKEMEDKVT(0.5)S(0.5)PEKAEEAK 100.17 2.5155e-36 912537000.0 5679.700000000001 6712.700000000001 6632.799999999999 5780.4 8129.4 7537.599999999999 6829.8 7919.5 7189.9 7616.1 7694.3 True False 6256.298962825849 7278.4027872227 7082.941694266549 6137.442179759109 7558.418988907505 7476.216284683314 7089.711776409968 7761.53935977244 6887.7335065507605 7135.2181462282415 6747.949878186354 0.927140698399401 1.078609491565891 1.0496434950062539 0.909526936410599 1.1201059766820587 1.1079240983770757 1.050646774856524 1.15020702582019 1.0207149772727677 1.057390507492325 1.0 12.720233542407225 -4.102942712691114 11.724966543269273 1.0297202937790975 0.7364909374517137 0.0 0.07306691416379459 0.0 0.0 0.009248536756575786 0.0 7.889641821550206e-05 4.102942712691114 -0.2932293563273838 (ac)SAEVPEAASAEEQKEMEDKVTS(ph)PEKAEEAK ddPTM_A549_MK2206_60min_R1 4 SAEVPEAASAEEQKEMEDKVTSPEKAEEAK 30 3 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 SAEVPEAAS(0.022)AEEQKEMEDKVT(0.125)S(0.854)PEKAEEAK;SAEVPEAASAEEQKEMEDKVT(0.128)S(0.872)PEKAEEAK;SAEVPEAAS(0.001)AEEQKEMEDKVT(0.18)S(0.819)PEKAEEAK;SAEVPEAAS(0.006)AEEQKEMEDKVT(0.137)S(0.857)PEKAEEAK 93.569 5.5816e-28 1087439000.0 8908.109999999999 10470.6 10674.5 9134.5 12824.800000000001 10894.699999999999 9792.1 8838.4 14788.9 13414.4 14357.199999999999 True False 10411.581185620644 11003.508816451445 12188.304611253556 11372.45291006329 10938.288908909828 12047.569922683435 11571.19781900456 10091.270266464797 11439.237763020466 10384.07772329459 10791.911001438024 0.9647578806231166 1.0196070756129498 1.129392617269496 1.0537941712591874 1.0135636688861036 1.1163518603033415 1.0722102709578216 0.9350772319304832 1.0599825889498335 0.9622093549428743 1.0 13.397662735402545 -12.054336870221103 0.4487108235151269 0.9494225835746452 1.0460098190069205 0.12799645509151902 0.056115001302284535 11.534790293493737 1.3370436170087308 0.6193265514983218 0.013259413225018784 8.823951853491136e-13 12.054336870221103 0.09658723543227532 (ac)SAEVPEAASAEEQKEMEDKVTS(ph)PEKAEEAK ddPTM_A549_PD325901_60min_R1 1 SAEVPEAASAEEQKEMEDKVTSPEKAEEAK 30 3 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 SAEVPEAAS(0.009)AEEQKEMEDKVT(0.175)S(0.816)PEKAEEAK 83.99799999999999 1.291e-21 739280000.0 2891.6 2927.4 3251.2 2579.7 3395.0 2944.8 3122.5 3881.3 2834.1 3044.3 4040.4 True False 3185.1531033165897 3174.102271711193 3471.8459830538245 2739.0422100762166 3156.5469121141746 2920.81852514533 3241.328446197561 3803.8844266790543 2714.9926328482325 2852.0823784565105 3543.456414205859 0.8988831047976724 0.8957644459759939 0.9797907966738506 0.7729860029025012 0.8908101421706364 0.8242851565594688 0.914736366786662 1.0734954750477892 0.7661989638037364 0.8048871059969576 1.0 11.790941588137715 (ac)SCINLPTVLPGS(ph)PSK ddPTM_A549_MK2206_60min_R1 4 SCINLPTVLPGSPSK 15 0 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 S(0.01)CINLPT(0.002)VLPGS(0.805)PS(0.184)K;SCINLPT(0.002)VLPGS(0.871)PS(0.128)K;S(0.002)CINLPT(0.005)VLPGS(0.952)PS(0.041)K;S(0.001)CINLPT(0.004)VLPGS(0.797)PS(0.197)K 68.044 2.5129e-07 54994400.0 3038.7599999999998 3298.5699999999997 2611.63 2563.87 4092.7400000000002 3325.02 2931.93 2989.5 4494.7699999999995 4444.24 3962.3799999999997 True False 3551.6283974509265 3466.4531236683897 2981.9984047859953 3192.0182650964966 3490.703367619896 3676.8714094303527 3464.623729483362 3413.2707799597774 3476.7117716727726 3440.2830973412697 2978.4116898753223 1.1924571776038118 1.1638596287585405 1.0012042374540986 1.0717182839253885 1.172001634121312 1.2345074463444201 1.1632454107203671 1.1460036876576518 1.1673039638849623 1.1550730575749526 1.0 11.540327468364117 -10.73976148067895 0.9224811317305728 0.997325954785182 1.1446962357790769 0.0 0.07415205372905044 0.4792019917787409 0.7032646962602649 0.04810016032571789 0.011496813230470814 1.8207005328893074e-11 10.73976148067895 0.14737028099389482 (ac)SCINLPTVLPGS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 SCINLPTVLPGSPSK 15 0 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 SCINLPTVLPGS(0.885)PS(0.115)K;SCINLPTVLPGS(0.858)PS(0.142)K 112.24 4.7238e-28 98803000.0 2704.9 3041.7 2781.3 3001.9 2641.4 2818.0 3254.1000000000004 3305.6000000000004 2392.6 2458.7 3475.1 True False 2979.499456757866 3298.034733847078 2970.055743315577 3187.3205451904487 2455.87717633531 2795.051142304921 3377.9365562118437 3239.6672148069683 2292.0473424906236 2303.4572623956315 3047.6847304739076 0.9776271892449194 1.0821443244670002 0.9745285375543882 1.0458170142470176 0.805817331359411 0.9171063904206054 1.108361544892008 1.0629928950371477 0.7520618256778207 0.75580562495959 1.0 11.573497954781214 -8.739362312925282 24.998505744701024 0.8829180426171886 0.9952320171721213 0.29822054820043875 0.10322600421778094 323.72609762308554 366564.3699668824 0.02002356046143345 0.022695703140209012 1.8223747402894276e-09 8.739362312925282 0.11231397455493264 (ac)SCINLPTVLPGS(ph)PSKTR ddPTM_A549_MK2206_60min_R1 1 SCINLPTVLPGSPSKTR 17 1 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 S(0.003)CINLPT(0.009)VLPGS(0.651)PS(0.148)KT(0.188)R 44.005 4.0349e-05 6620700.0 551.1 863.8 441.03 483.24 775.95 604.49 538.25 849.1 933.72 955.03 812.55 True False 644.1122068986055 907.7637304118919 503.5746857184083 601.6338216934682 661.8087828947495 668.4567305720135 636.043057779149 969.4625252596915 722.233910844449 739.2880597028586 610.7714097608491 1.0545880121514055 1.4862577322788106 0.8244896170165951 0.9850392668658824 1.0835621515975744 1.0944466618595514 1.041376606066409 1.5872755498481663 1.182494627781028 1.2104169381345649 1.0 9.254488720865591 (ac)SDAAVDT(ph)SSEITTK ddPTM_A549_MK2206_60min_R1 2 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 SDAAVDT(0.807)S(0.179)S(0.014)EITTK;S(0.001)DAAVDT(0.712)S(0.248)S(0.038)EIT(0.001)TK 95.264 9.0524e-23 10060100.0 2060.54 2267.7 2062.1000000000004 1732.9 3176.5 2130.99 2158.15 2614.1 3489.2 2938.2 2540.77 True False 2408.3087766337385 2383.1162438701626 2354.5367875653133 2157.460577792838 2709.241057884107 2356.4899473633204 2550.2579194539176 2984.6566803454953 2698.9017711074534 2274.458579331477 1909.8266873153327 1.2610090709430437 1.2478180662665987 1.2328536422721765 1.1296630171325166 1.4185795370220324 1.2338763318235269 1.3353347381687535 1.5627892835349706 1.4131658066320842 1.1909240741256537 1.0 10.899226007375715 -10.8426991416191 1.1372175056714584 1.0033021551530399 1.3196036859394926 0.2808019558396758 0.12379243841497582 0.3288759778525677 0.7674444219259992 0.07986861687806793 0.020433635542554535 1.4364842160916465e-11 10.8426991416191 0.31630153078645273 (ac)SDAAVDT(ph)SSEITTK ddPTM_A549_PD325901_60min_R1 2 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 S(0.001)DAAVDT(0.722)S(0.224)S(0.053)EIT(0.001)TK;S(0.003)DAAVDT(0.882)S(0.096)S(0.019)EITTK 97.69 5.0260999999999997e-26 14582000.0 2180.7 2215.07 2534.4 2708.2 2539.2 2461.3 2503.0699999999997 2697.6 2613.59 2617.5 2652.2 True False 2402.0830586535076 2401.74172268884 2706.399624585263 2875.479363231544 2360.8553517644496 2441.255988841414 2598.3256985824587 2643.794251773738 2503.749901304051 2452.2306032946553 2325.996213681017 1.032711508524805 1.0325647602357666 1.1635442949850021 1.2362356165150157 1.0149867561599621 1.0495528644812333 1.1170807945858456 1.1366287856461246 1.076420454417563 1.0542711070943085 1.0 11.183633033017472 -10.098970914439656 0.7118380755848925 1.0019541597220754 1.098899987161016 0.12494426548161319 0.06467479747526765 0.7494377180907665 0.7439142894617102 0.03663773113118859 0.013945450207241165 7.962126725690813e-11 10.098970914439656 0.09694582743894054 (ac)SDAAVDTS(ph)SEITTK ddPTM_A549_MK2206_60min_R1 1 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 SDAAVDT(0.007)S(0.884)S(0.107)EIT(0.002)TK 116.63 8.446199999999999e-32 62808000.0 1278.5 1660.0 1220.4 1439.3 2070.5 1788.9 1797.0 1375.7 2256.1 2035.7 2067.8 True False 1494.2795436760437 1744.486909566729 1393.4710710172687 1791.9285646126334 1765.932192774766 1978.2002106242865 2123.4916392552364 1570.709687904555 1745.0969522513822 1575.833956144948 1554.3081916232654 0.9613791857556062 1.1223558615777787 0.8965217313575219 1.1528785438241855 1.1361531788174442 1.2727207006213632 1.3661972900223447 1.0105522806671696 1.1227483465996944 1.013849096747796 1.0 10.602056877495777 -4.0704077514173225 11.479219235493376 1.0871037182859749 0.6233975904343623 0.0 0.13229920910905604 0.0 0.0 0.0175695619105511 0.0 8.503392947552444e-05 4.0704077514173225 -0.4637061278516126 (ac)SDAAVDTS(ph)SEITTK ddPTM_A549_PD325901_60min_R1 2 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 S(0.001)DAAVDT(0.387)S(0.5)S(0.11)EIT(0.002)TK;S(0.033)DAAVDT(0.414)S(0.462)S(0.091)EITTK 103.83 1.8603e-23 192593000.0 4913.1 5271.200000000001 4412.5 4770.4 5532.0 4316.6 5132.799999999999 4162.6 6099.3 4662.5 6059.2 True False 5411.874295166943 5715.422523278008 4711.95878451802 5065.056773635532 5143.451404363953 4281.447040764168 5328.131512775933 4079.5736775034748 5842.967631887097 4368.108954292772 5313.95681243346 1.018426473189315 1.0755492987645683 0.886713789900042 0.9531610723264522 0.9679136631915105 0.8056985014907438 1.0026674474111845 0.7677092271352662 1.0995512079089298 0.822006860137136 1.0 12.375570787473333 (ac)SDAAVDTSSEITTK ddPTM_A549_MK2206_60min_R1 4 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ;;; 141.88 2.5367999999999996e-70 18172100.0 8296.82 9498.7 8942.37 8965.37 12304.5 8854.25 8984.509999999998 9593.82 12497.08 11907.599999999999 11978.6 False True 9697.120378226256 9982.143257771977 10210.53253140994 11161.88605247076 10494.524349672594 9791.200858024524 10616.879169618842 10953.77336484152 9666.511333735965 9217.664889812635 9003.98302745838 1.076981192507149 1.1086363920645583 1.134001752365824 1.2396609387680628 1.1655424402365806 1.0874299549616495 1.179131406316716 1.2165475358446474 1.073581692041972 1.0237319263822038 1.0 13.136347621971181 -9.172341891010598 1.8682507961822747 1.024282938705537 1.1506326785028484 0.524146614571261 0.05019812944235266 0.17607851924885365 1.269065310889429 0.010968449301801375 0.010216338123874125 6.724470752342896e-10 9.172341891010598 0.12634973979731146 (ac)SDAAVDTSSEITTK ddPTM_A549_PD325901_60min_R1 2 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ; 89.54799999999999 1.5994e-08 4774100.0 1748.73 1644.8899999999999 1764.75 1504.19 2093.17 1708.08 1802.69 1871.4900000000002 1695.48 1513.96 1497.05 False True 1926.2597822530158 1783.5106530419569 1884.516547303838 1597.1004000366513 1946.152960244486 1694.1699627921196 1871.2923544198195 1834.161663794497 1624.224871790522 1418.3683072259703 1312.922340581844 1.467154394980712 1.3584281399702312 1.435360256318498 1.2164469677078302 1.4823062264155051 1.2903809390899077 1.4252879218968306 1.3970069722339074 1.2371065839817448 1.0803139404249882 1.0 10.358565867937108 -9.695781376110347 0.5822789175569156 1.0042628813533698 1.3911748233856434 0.7246621825878535 0.08013944318699368 0.24130151535868608 0.17528904319634273 0.040398021364130336 0.019100322085140526 2.0147382140632777e-10 9.695781376110347 0.3869119420322735 (ac)SDEFSLADALPEHS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 SDEFSLADALPEHSPAK 17 0 Q8NDC0 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like 1 S(0.036)DEFS(0.036)LADALPEHS(0.929)PAK;SDEFSLADALPEHS(1)PAK 73.208 2.9901e-30 5039200.0 1831.85 1919.92 1399.58 1640.8400000000001 2611.6000000000004 1845.49 1877.0 1728.97 2416.0 2079.37 1907.99 True False 2017.8180634633047 2081.7183963598272 1494.56391515824 1742.1909601819834 2428.170225530891 1830.4609413102598 1948.4302621338106 1694.4843369992745 2314.463921866316 1948.0782233324949 1673.319325745134 1.2058774630865896 1.2440652326971913 0.8931731631634066 1.0411586918152522 1.4511098916816847 1.093910118139077 1.1644103024186188 1.0126485189817047 1.3831573485447426 1.1641999189037096 1.0 10.708497071167209 (ac)SDKPDMAEIEKFDK ddPTM_A549_MK2206_60min_R1 4 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ;;; 83.729 6.608300000000001e-14 103204300.0 33826.1 32352.199999999997 35694.3 32919.8 36378.3 30968.6 32868.4 31085.9 41277.5 43252.6 41141.1 False True 39535.11871125553 33998.788792581174 40756.2884711666 40985.15247782599 31027.10026004261 34245.67669670704 38840.162824539126 35492.42152157606 31928.212156622663 33481.80761976468 30924.62943340358 1.278434679270602 1.0994081227649897 1.317923261099557 1.3253239643853396 1.003313566840298 1.1073916591451924 1.2559621096893563 1.1477072537929438 1.032452538368497 1.0826906654408908 1.0 14.91646868719106 -8.392472957071202 0.479860363035938 0.9930075955539173 1.230932784384581 0.3110800366062505 0.0980185208132969 0.5796513160577802 0.3102140752804816 0.03521773727571062 0.04511694389219542 4.050671673347395e-09 8.392472957071202 0.23792518883066371 (ac)SDKPDMAEIEKFDK ddPTM_A549_PD325901_60min_R1 7 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ;;;;;; 75.961 1.1054000000000001e-10 216277600.0 78995.5 76336.2 82764.1 81438.1 87128.3 85906.29999999999 85375.7 83787.4 79759.9 89173.3 91713.3 False True 87015.06500658636 82769.31947591717 88380.96952696404 86468.34647765549 81008.70878431744 85206.70757494301 88624.7189828756 82116.19457705643 76407.8687755236 83542.88261958944 80433.1455185097 1.0818309348173134 1.0290449160274338 1.0988127961081087 1.0750337553037377 1.0071557970547762 1.0593481956432351 1.10184325642817 1.0209248195839788 0.9499550003044481 1.0386623832877966 1.0 16.29550252051883 -8.530311891556334 5.81252675797333 0.9766120464877371 1.062693300580974 0.41876636383541854 0.03398717600713677 0.07719701061077554 9.536086512408803 0.005172523712212494 0.005992816606693672 2.949090556409487e-09 8.530311891556334 0.08608125409323686 (ac)SDNDDIEVES(ph)DADKR ddPTM_A549_PD325901_60min_R1 2 SDNDDIEVESDADKR 15 1 A0A494C130;Q6V3B1;G3V563;G3V2R5;P61244-2 A0A494C130 MAX Protein max 1 SDNDDIEVES(1)DADKR;SDNDDIEVES(1)DADKR 100.42 7.4013e-19 4731400.0 864.96 804.13 1384.77 871.11 1376.74 1051.62 1238.91 1218.4499999999998 1212.6 1085.72 1033.92 True False 952.7701024501027 871.8968571944807 1478.748819498475 924.916486265649 1280.0425318951598 1043.0559553834996 1286.0573980075646 1194.1470588944655 1161.6386389300899 1017.167453909866 906.7543945588862 1.0507477087151058 0.9615579063376221 1.6308151671190412 1.020029780738585 1.4116750242141027 1.1503180592699755 1.4183084258810787 1.3169465359750352 1.2810951299499338 1.1217673275294056 1.0 9.824568021966915 -10.658225461322589 0.9383625650312634 1.0007722857786332 1.2536612931351463 0.11486704853551233 0.19155469933216643 0.7023354251130695 1.1062915899153722 0.11788560289970328 0.031844228496553065 2.196719163403571e-11 10.658225461322589 0.2528890073565131 (ac)SDNDDIEVES(ph)DEEQPR ddPTM_A549_MK2206_60min_R1 1 SDNDDIEVESDEEQPR 16 0 G3V5L1;P61244-6;P61244-5;P61244-3;P61244-4;P61244 G3V5L1 MAX Protein max 1 S(0.003)DNDDIEVES(0.997)DEEQPR 48.111999999999995 0.00089173 351080.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SDNDDIEVES(ph)DEEQPR ddPTM_A549_PD325901_60min_R1 1 SDNDDIEVESDEEQPR 16 0 G3V5L1;P61244-6;P61244-5;P61244-3;P61244-4;P61244 G3V5L1 MAX Protein max 1 SDNDDIEVES(1)DEEQPR 57.678999999999995 0.00072337 919980.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SDQDHS(ph)MDEMTAVVK ddPTM_A549_MK2206_60min_R1 2 SDQDHSMDEMTAVVK 15 0 P08047;H3BUU5;P08047-3 P08047 SP1 Transcription factor Sp1 1 S(0.399)DQDHS(0.601)MDEMTAVVK;S(0.494)DQDHS(0.506)MDEMTAVVK 70.332 0.0004713 5383090.0 1923.84 2406.6 2383.5 1988.0500000000002 2757.6000000000004 2199.2 2097.51 2139.1000000000004 3466.7 3107.5 3084.9 True False 2248.537158627861 2529.0856605802937 2721.5161404208948 2475.1223392469574 2351.9606929706315 2431.9178842891874 2478.6004163907905 2442.3239757190063 2681.497985182335 2405.5135917475204 2318.834191091311 0.9696843212276571 1.090671196024599 1.1736570690895627 1.0673994495837982 1.0142858432942679 1.0487674770504638 1.0688993744845072 1.0532551163434318 1.1563991920958971 1.0373805945199626 1.0 11.179183948008424 (ac)SDQDHS(ph)MDEMTAVVK ddPTM_A549_PD325901_60min_R1 1 SDQDHSMDEMTAVVK 15 0 P08047;H3BUU5;P08047-3 P08047 SP1 Transcription factor Sp1 1 S(0.399)DQDHS(0.601)MDEMTAVVK 70.332 0.0004713 1835800.0 253.4 553.7 395.76 461.05 501.32 497.54 255.89 629.16 381.81 525.84 591.24 True False 279.1249814567792 600.362242210319 422.6186534982103 489.52801137947847 466.10901266011126 493.488199198861 265.62803397838104 616.6109102335282 365.76385348004067 492.6383726595844 518.5212281791587 0.5383096511534459 1.1578354165335787 0.815046001071701 0.9440848026579491 0.8989198268639871 0.9517222678265194 0.5122799598989641 1.1891719696777345 0.705398031175037 0.9500833252083726 1.0 9.01825924373489 -11.218671398230757 1.675376315152277 1.0001015160721027 0.8444846633187891 0.04252966872729347 0.20617281929272172 0.8261160972958793 4.174191902254039 0.1391020772558635 0.028728830460114863 6.044057700852048e-12 11.218671398230757 -0.1556168527533136 (ac)SDQEAKPS(ph)TEDLGDKKEGEYIK ddPTM_A549_MK2206_60min_R1 1 SDQEAKPSTEDLGDKKEGEYIK 22 3 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.294)DQEAKPS(0.353)T(0.353)EDLGDKKEGEYIK 63.45399999999999 5.603000000000001e-07 15022000.0 2453.5 2886.3 2719.7 3095.1 3726.3 2228.8 2567.5 1592.3 4736.6 4567.2 4644.5 True False 2867.590817684139 3033.2003416159323 3105.3943558224078 3853.39963894432 3178.1662061997627 2464.6501366422967 3033.9815157416897 1818.0134012142364 3663.767662795928 3535.4663479418423 3491.142468321046 0.8213903739835675 0.8688274308881624 0.8895066254101764 1.1037646483666677 0.9103513348534872 0.7059723740886438 0.869051189767339 0.5207502752210946 1.0494466198504642 1.0126960959121534 1.0 11.769483516988544 (ac)SDQEAKPSTEDLGDKK ddPTM_A549_MK2206_60min_R1 2 SDQEAKPSTEDLGDKK 16 2 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 0 ; 98.507 6.7511e-40 89391000.0 34072.0 36661.0 33551.0 31296.0 41797.0 32621.0 33545.0 33225.0 46741.0 47062.0 48320.0 False True 39822.52061957773 38526.88830820833 38309.03630260602 38963.52140493081 35648.71666815109 36072.9325679327 39639.69228648687 37934.74549729509 36154.23813003937 36430.66151402149 36320.81043584303 1.0964105740404695 1.0607386742171436 1.0547406801474044 1.072760242334236 0.9814956285493927 0.9931753211193297 1.0913768666177288 1.0444355465113564 0.9954138604341471 1.0030244666035881 1.0 15.148508773773187 -2.0000000000445532 0.1984039067740883 0.9920223995406828 1.4574291759046791 0.3754138130591381 0.0319130673863252 34.72800798456688 0.38439193796220883 0.027063266229363152 5.07612875382103 0.009999999998974123 2.0000000000445532 0.4654067763639963 (ac)SDQEAKPSTEDLGDKK ddPTM_A549_PD325901_60min_R1 4 SDQEAKPSTEDLGDKK 16 2 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 0 ;;; 114.59 6.149299999999999e-35 177525000.0 51377.6 51811.7 51638.5 50566.5 60793.0 50008.2 54023.4 54502.8 59742.0 58093.3 61859.0 False True 56593.4161298099 56178.053792176965 55142.999137526116 53689.87786014618 56523.10940446453 49600.94979936588 56079.290049738825 53415.69889738051 57231.251498401296 54425.27912373538 54250.735156509305 1.0431824742382225 1.0355261293714728 1.0164470394445844 0.9896617567532479 1.0418865152960526 0.9142908323043155 1.0337056242271054 0.9846078351432516 1.0549396488968015 1.0032173567182552 1.0 15.727355067327101 -11.470304448541714 2.415510472132966 0.9996764574580763 1.0199643405941476 0.0 0.038172320438759344 1.0620414993143463 11.230652900052828 0.03235723987163941 0.005601825140968964 3.3860670329742516e-12 11.470304448541714 0.020287883136071327 (ac)SDQEAKPSTEDLGDKKEGEYIK ddPTM_A549_PD325901_60min_R1 1 SDQEAKPSTEDLGDKKEGEYIK 22 3 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 0 52.50899999999999 1.2928e-11 11607000.0 2391.0 2640.7 3382.6 3476.0 3327.8 4734.6 3845.3 4175.7 3938.5 4222.5 4732.7 False True 2633.732559838831 2863.2410565374566 3612.163577226213 3690.7046254312268 3094.0668082867614 4696.042987351629 3991.6349957289012 4092.4123877267193 3772.9785415026854 3955.89062938364 4150.607903057142 0.6345414024531076 0.6898365548883884 0.8702733820184904 0.8891961639433174 0.7454490716908764 1.131410891376356 0.9616988857918503 0.9859790380855878 0.9090183003611803 0.9530870469527891 1.0 12.019106935458549 -5.398704363138949 0.6414047596541247 0.9653702782932334 0.43469849637502367 0.6491009514113002 0.08294070501343355 1.2641281038668786 0.3913303167204232 0.01392992924838537 0.47250449732192323 3.992966226700102e-06 5.398704363138949 -0.5306717819182097 (ac)SDSGEQNYGERESRS(ph)ASR ddPTM_A549_PD325901_60min_R1 1 SDSGEQNYGERESRSASR 18 2 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 SDSGEQNYGERES(0.289)RS(0.355)AS(0.355)R 50.425 0.00072999 2167700.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SDVEENNFEGRES(ph)R ddPTM_A549_MK2206_60min_R1 2 SDVEENNFEGRESR 14 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 1 SDVEENNFEGRES(1)R;SDVEENNFEGRES(1)R 62.891000000000005 0.00022326 17843700.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SDVEENNFEGRES(ph)R ddPTM_A549_PD325901_60min_R1 2 SDVEENNFEGRESR 14 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 1 SDVEENNFEGRES(1)R;SDVEENNFEGRES(1)R 107.14 8.135300000000001e-08 28854000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SEETVPEAAS(ph)PPPPQGQPYFDR ddPTM_A549_MK2206_60min_R1 2 SEETVPEAASPPPPQGQPYFDR 22 0 P35612-2;P35612-8;P35612-4;P35612-3;C9J299;C9J080;A0A1C7CYY0;C9JTM0;P35612-7;P35612-5;P35612-6;P35612 P35612-2;P35612 ADD2 Beta-adducin 1 S(0.027)EET(0.027)VPEAAS(0.945)PPPPQGQPYFDR;S(0.003)EET(0.003)VPEAAS(0.994)PPPPQGQPYFDR 118.15 5.0142e-33 24848400.0 985.0699999999999 1276.98 1044.59 902.33 1424.62 1513.27 975.94 1160.29 1611.76 1305.08 1490.1399999999999 True False 1151.3257333507697 1341.972827577422 1192.7285693821116 1123.4008905071325 1215.0602851827023 1673.4032269726708 1153.255665228022 1324.7646607390975 1246.6989334518357 1010.261521582575 1120.0971122282097 1.027880280005755 1.1980861417523299 1.0648438928740884 1.0029495462874203 1.0847811961282379 1.4939804849989917 1.0296032840704767 1.182723039169115 1.1130275400601444 0.9019410107868784 1.0 10.129408103781042 -10.141045439801749 0.8238544161736131 1.0070696037379425 1.1367334663384396 0.1932882552209675 0.13325473880248848 0.8947692168312785 1.1984076707796474 0.06117781413093421 0.025250293710755288 7.226941848690891e-11 10.141045439801749 0.12966386260049712 (ac)SEETVPEAAS(ph)PPPPQGQPYFDR ddPTM_A549_PD325901_60min_R1 1 SEETVPEAASPPPPQGQPYFDR 22 0 P35612-2;P35612-8;P35612-4;P35612-3;C9J299;C9J080;A0A1C7CYY0;C9JTM0;P35612-7;P35612-5;P35612-6;P35612 P35612-2;P35612 ADD2 Beta-adducin 1 S(0.205)EET(0.205)VPEAAS(0.59)PPPPQGQPYFDR 94.057 1.2416e-23 10203000.0 611.52 484.79 599.62 796.87 797.56 614.2 643.67 987.3 669.3 768.72 1230.2 True False 673.6010602227699 525.6449546706531 640.313819007977 846.0908500769216 741.5421370326306 609.1981588373612 668.1652140797393 967.6075269781339 641.1716485534465 720.1828880094245 1078.893198880321 0.6243445235560251 0.48720758942235354 0.5934913851273665 0.7842211360262512 0.6873174636768548 0.5646510326226813 0.6193061692975388 0.8968520034998091 0.5942864865761102 0.6675200925882494 1.0 10.075336342192523 -14.999999968779129 0.25278352123553743 3.3079434970003825 0.6089132226740568 0.007199768694737707 0.1448413036348052 21.647132775601595 0.279253772245674 25.0477690928151 0.053364170986032695 1.0000000718887153e-15 14.999999968779129 -2.6990302743263257 (ac)SEKS(ph)VEAAAELSAK ddPTM_A549_MK2206_60min_R1 1 SEKSVEAAAELSAK 14 1 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 S(0.333)EKS(0.667)VEAAAELSAK 75.669 6.283e-23 30162000.0 3616.3 4095.2 3707.3 3773.3 3730.6 3510.2 3437.3 4045.4 4636.4 4695.1 5267.6 True False 4226.643029953598 4303.6281879865455 4233.050886252311 4697.758669389876 3181.833681895937 3881.6470341178174 4061.812916868128 4618.847838517912 3586.2628028094077 3634.473649111434 3959.5095416358995 1.0674663075082098 1.0869094120703826 1.0690846534753888 1.1864496397826492 0.8035928815015154 0.9803353150941233 1.0258373857055945 1.1665201939656402 0.9057340978973163 0.9179100620653702 1.0 11.951106021615614 -6.737163284553117 24.999989372236165 0.9693223334855872 1.0989802524351713 0.33410978109317846 0.08892278294410981 219.13774017506532 225671.06531865956 0.01283540946899837 0.02670903954607974 1.8316256445552862e-07 6.737163284553117 0.12965791894958412 (ac)SEKS(ph)VEAAAELSAK ddPTM_A549_PD325901_60min_R1 2 SEKSVEAAAELSAK 14 1 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 S(0.194)EKS(0.806)VEAAAELSAK;S(0.072)EKS(0.928)VEAAAELSAK 85.837 1.7272e-31 67464000.0 14943.8 14585.5 15099.4 15935.5 16615.6 15126.1 15814.0 17688.5 17087.300000000003 16572.6 16177.8 True False 16460.883574955882 15814.671272816693 16124.136084068321 16919.799642853646 15448.577576708174 15002.91805664247 16415.810423752846 17335.688991140192 16369.180203686388 15526.203207702398 14188.033159523702 1.1601948902908035 1.1146485982238568 1.136460276260703 1.1925401817584735 1.0888456069288457 1.0574346625749023 1.1570180474757172 1.2218528668650332 1.1537314594376031 1.0943168114377044 1.0 13.79238698672998 -10.637694958600102 0.9211233424060318 1.000277564942527 1.141269060624565 0.2869740904651402 0.05073372985179884 0.33409852673932017 0.5071488488875024 0.030813924289972917 0.008385587219321023 2.3030588806450307e-11 10.637694958600102 0.14099149568203795 (ac)SES(ph)GHSQPGLYGIER ddPTM_A549_PD325901_60min_R1 1 SESGHSQPGLYGIER 15 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 S(0.086)ES(0.801)GHS(0.111)QPGLY(0.002)GIER 40.589 0.034714 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SESSS(ph)KSSQPLASK ddPTM_A549_PD325901_60min_R1 2 SESSSKSSQPLASK 14 1 P17096;P17096-3;A0A669KAX1;A0A1W2PRV2;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 S(0.001)ES(0.007)S(0.218)S(0.747)KS(0.02)S(0.006)QPLASK;S(0.011)ES(0.026)S(0.026)S(0.922)KS(0.013)S(0.002)QPLASK 119.88 3.503399999999999e-70 142380000.0 19993.3 23762.2 20595.8 23626.9 26102.4 23905.2 23365.7 29062.0 24997.9 24896.0 26961.4 True False 22023.00509771045 25764.72398744816 21993.554840606535 25086.27995241688 24269.057472391476 23710.523976943798 24254.894499701648 28482.33561130205 23947.32519553891 23324.06231122207 23645.31872239627 0.9313896486770887 1.0896331865911555 0.9301441481427263 1.0609406558202055 1.0263789529470124 1.0027576390622202 1.0257799771896499 1.204565518684435 1.0127723578898764 0.9864135300967666 1.0 14.529266967998645 -5.226174012803281 22.29511624930225 1.023454208189715 0.9313888146129434 0.1452973822126704 0.0672657503948595 5754.379694349844 3637701.099202622 0.008719419885148549 1.8287850851962606 5.940540857559092e-06 5.226174012803281 -0.09206539357677168 (ac)SESSSKS(ph)SQPLASK ddPTM_A549_PD325901_60min_R1 1 SESSSKSSQPLASK 14 1 P17096;P17096-3;A0A669KAX1;A0A1W2PRV2;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 SESS(0.001)S(0.004)KS(0.718)S(0.276)QPLASK 106.52 4.7759e-32 35157000.0 5440.0 7974.5 7079.9 7264.6 8796.3 7565.2 7705.4 7798.2 7455.3 7673.5 10908.0 True False 5992.264795283667 8646.539101510189 7560.384588897259 7713.317842896345 8178.478233587604 7503.591519434061 7998.633213556673 7642.658783430442 7141.979667504123 7188.9939004323005 9566.385151509137 0.6263875748655554 0.9038460154561266 0.7903073594841179 0.806293884339325 0.8549183525500659 0.7843706270022317 0.8361186683242473 0.7989077025844794 0.7465703663810197 0.7514848907477039 1.0 13.223758161391538 -10.840650595102872 0.9943240091978233 1.00463355051689 0.7971408511509762 0.0 0.09815953373106061 0.3141302669194667 0.5308795979174418 0.04763363239606208 0.010673816721746188 1.4432760499373875e-11 10.840650595102872 -0.20749269936591375 (ac)SESSSKSS(ph)QPLASK ddPTM_A549_PD325901_60min_R1 1 SESSSKSSQPLASK 14 1 P17096;P17096-3;A0A669KAX1;A0A1W2PRV2;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 SESSS(0.001)KS(0.324)S(0.674)QPLASK 104.94 1.6133999999999997e-32 26279000.0 8609.4 10405.0 9203.9 10282.0 10988.0 12197.0 11326.0 11394.0 10459.0 10286.0 12741.0 True False 9483.419950094696 11281.865866350672 9828.532001546835 10917.095787883742 10216.240786542134 12097.671675902468 11757.017127825005 11166.737731579919 10019.444602152238 9636.540204580262 11173.937771853492 0.8487088566022701 1.0096589131513731 0.8795943025836731 0.9770141923810672 0.9142918991616596 1.0826686100199885 1.0521820836912352 0.9993556398450947 0.8966798282509362 0.8624121953546362 1.0 13.447850070544833 -5.24679164436853 23.620959470968586 0.9654631329071669 0.8487086776997496 0.2001233558362333 0.06810959383240263 1488.382326098049 2400079.1732070814 0.008998818712662171 0.25516197936177515 5.665110112330065e-06 5.24679164436853 -0.11675445520741734 (ac)SET(ph)APAAPAAPAPAEKT(ph)PVK ddPTM_A549_MK2206_60min_R1 1 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 2 S(0.638)ET(0.719)APAAPAAPAPAEKT(0.644)PVK 63.165 2.5741999999999998e-17 17341000.0 1960.2 2835.1 2209.9 3214.3 2867.3 2301.3 2388.0 2410.6 5097.1 3476.7 3215.5 True False 2291.033837711209 2979.394480308814 2523.297050017259 4001.803644295412 2445.5239682893434 2544.8220385206946 2821.868689227327 2752.309932152884 3942.6149883961352 2691.311055326984 2417.002606714677 0.947882237009793 1.2326815337442152 1.043977794234597 1.655688592630392 1.0118003023643547 1.052883448057078 1.1675075075996573 1.1387285741880002 1.6312001391488589 1.1134911678830013 1.0 11.239003313699513 (ac)SET(ph)APAAPAAPAPAEKT(ph)PVKK ddPTM_A549_PD325901_60min_R1 2 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 2 S(0.43)ET(0.57)APAAPAAPAPAEKT(1)PVKK;S(0.441)ET(0.559)APAAPAAPAPAEKT(1)PVKK 83.944 4.256e-18 84359000.0 12774.8 12765.400000000001 13474.9 14190.7 15866.5 14312.199999999999 13637.9 16306.7 15550.1 15822.7 15844.5 True False 14071.68829168929 13841.185058175193 14389.387745156238 15067.227309581966 14752.091776453473 14195.646188394783 14156.897747445239 15981.450076141316 14896.583373929401 14823.652021681128 13895.726946560924 1.0126629823545803 0.9960749165124297 1.0355260865799822 1.084306518653274 1.0616279258498593 1.0215835589593307 1.01879504410879 1.1500981659758787 1.0720262013795674 1.0667777280518496 1.0 13.762353689781719 -5.87570243956474 5.246475049852307 1.046103295942114 1.0047965414543525 0.17111354688692038 0.03959590097326596 0.3376886707385914 14.018659424070677 0.006225930332410114 0.020308827825722423 1.3313663021190094e-06 5.87570243956474 -0.04130675448776144 (ac)SET(ph)APAETATPAPVEKS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.444)ET(0.554)APAET(0.002)AT(0.005)PAPVEKS(0.995)PAK 65.275 6.2483e-05 4834400.0 3090.2 3283.4 3172.0 2758.9 4544.9 3396.4 3167.8 3501.8 4319.1 4206.8 4367.5 True False 3611.7502118636744 3450.5110354646995 3621.837297006537 3434.830623851729 3876.3512305926224 3755.804793652144 3743.348255332629 3998.1908738127304 3340.830746185429 3256.4809582505136 3282.929213132126 1.1001608555604012 1.0510464318457509 1.1032334424143952 1.046270084079784 1.180759918638128 1.1440407483135662 1.1402464117589772 1.2178730073799546 1.0176371555078585 0.9919437023570853 1.0 11.680767927364867 -8.90860573106532 11.092344340318235 1.0077703389026047 1.1205358336159992 0.5517367120580376 0.04806545691948974 0.23798395869179306 27.296831404898956 0.008557237101431664 0.009103316560993118 1.2342248006703405e-09 8.90860573106532 0.11276549471339448 (ac)SET(ph)APAETATPAPVEKS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.425)ET(0.575)APAETAT(0.033)PAPVEKS(0.967)PAK 80.733 7.4258e-15 9860600.0 6016.2 7988.2 6205.3 6534.7 6930.3 6140.9 5569.1 6949.2 6710.5 7182.5 6921.5 True False 6626.960195107639 8661.393648590338 6626.428973500215 6938.333577619514 6443.5396362370775 6090.890546408902 5781.035148028456 6810.592754458061 6428.481021392349 6728.995724226882 6070.1993790035285 1.091720350740029 1.4268713608567127 1.0916328376989812 1.143015763472088 1.0615037882486877 1.0034086470828196 0.9523633058948154 1.1219718380281727 1.0590230435639554 1.1085296057164271 1.0 12.567528188025367 -6.32497194600043 1.4696563384364465 1.0296272414618939 1.248804841546633 0.37295903478212944 0.09355147986739742 0.2589603753402643 1.0447826601667085 0.01218200095418732 0.04558974534993206 4.7318182396863453e-07 6.32497194600043 0.2191776000847392 (ac)SET(ph)APAETATPAPVEKS(ph)PAKK ddPTM_A549_MK2206_60min_R1 3 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.433)ET(0.566)APAETAT(0.003)PAPVEKS(0.997)PAKK;S(0.402)ET(0.472)APAET(0.081)AT(0.113)PAPVEKS(0.932)PAKK;S(0.44)ET(0.56)APAETAT(0.003)PAPVEKS(0.997)PAKK 98.81200000000001 3.3338e-22 76402000.0 6343.8 7506.2 6251.099999999999 6692.7 8751.8 6885.5 6411.0 7198.0 10449.9 10433.6 11658.900000000001 True False 7414.478348980903 7888.233518427578 7137.5999770862345 8332.411800446718 7464.421813439351 7614.119039775014 7575.795714671853 8218.338542950489 8083.014335061262 8076.642513550092 8763.67336072951 0.8460468622901417 0.90010583390467 0.814452990577011 0.950789863732793 0.8517457812711078 0.8688273428690633 0.8644543678019082 0.9377732606714102 0.9223317668686377 0.9216046948693867 1.0 13.097319997922488 -9.671779425100173 0.3476010620209794 1.0170882877940848 0.8617349792310999 0.3627007827266443 0.04149633614989774 0.6782949357761735 0.180758096261341 0.040430951230025526 0.01619759899357831 2.1292201863208212e-10 9.671779425100173 -0.1553533085629849 (ac)SET(ph)APAETATPAPVEKS(ph)PAKK ddPTM_A549_PD325901_60min_R1 3 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.434)ET(0.553)APAET(0.009)AT(0.011)PAPVEKS(0.993)PAKK;S(0.443)ET(0.557)APAETAT(0.004)PAPVEKS(0.996)PAKK;S(0.427)ET(0.573)APAETAT(0.003)PAPVEKS(0.997)PAKK 107.45 1.0129999999999999e-29 140448000.0 10940.099999999999 11191.8 12423.2 12535.900000000001 14062.900000000001 13383.0 12693.4 12382.3 13066.1 13634.5 15453.7 True False 12050.730898324042 12134.972263625516 13266.313058770387 13310.214071905446 13075.170418371266 13274.01328511951 13176.454283094998 12135.325312773572 12516.977255586704 12773.615343121674 13552.992869075606 0.8891564405542237 0.8953721425851523 0.9788474905082148 0.9820867022129025 0.9647441376734872 0.9794156474034119 0.9722173109941074 0.8953981921191162 0.9235581672995034 0.9424940650760417 1.0 13.726323852574708 -6.346840791809901 0.006732746072547946 1.8744271019472285 1.4538421488422539e-05 0.08336254770607698 0.0368506522399383 11167.861957003955 16.01303295612009 2151.4810830611887 2308.0961847597728 4.499447700988657e-07 6.346840791809901 -1.87441256352574 (ac)SET(ph)APLAPTIPAPAEKT(ph)PVKK ddPTM_A549_MK2206_60min_R1 1 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 2 S(0.439)ET(0.561)APLAPT(0.009)IPAPAEKT(0.992)PVKK 64.16 3.5278e-15 8712500.0 1275.9 1663.3 1761.0 1733.7 1961.3 1753.5 1581.6 1546.6 2582.1 2368.9 2489.9 True False 1491.2407272399396 1747.9548654712903 2010.7362799585458 2158.4565778287497 1672.7953681183985 1939.0542061209023 1868.9562474379977 1765.835286263856 1997.258472766408 1833.763844727498 1871.589112255908 0.7967778384019781 0.9339415654990662 1.0743470705142741 1.1532748099966599 0.893783446999275 1.036046957862282 0.9985932463484269 0.9434951692657678 1.0671458065702386 0.979789758723902 1.0 10.870048025792837 -5.422721040888963 3.103988844976821 1.0253433413046855 0.7941738726797888 0.48117861358999914 0.06658705555480236 0.16722305511057828 2.66841321558255 0.00878105700536467 0.07521772367288994 3.7781479367913512e-06 5.422721040888963 -0.23116946862489673 (ac)SET(ph)APLAPTIPAPAEKT(ph)PVKK ddPTM_A549_PD325901_60min_R1 2 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 2 S(0.442)ET(0.558)APLAPTIPAPAEKT(1)PVKK;S(0.456)ET(0.544)APLAPT(0.002)IPAPAEKT(0.999)PVKK 92.12100000000001 1.1854e-27 45279000.0 5540.1 5884.6 5558.0 5538.3 6868.4 6115.0 6791.9 6617.4 6104.9 7397.0 6967.2 True False 6102.526873593937 6380.515894005494 5935.199302969108 5880.388212608105 6385.987278693663 6065.201467421788 7050.36947117029 6485.410765750125 5848.332283361619 6929.952157620083 6110.278568719695 0.9987313679665211 1.0442266784151584 0.9713467620532281 0.9623764524765752 1.0451221178990762 0.9926227420254341 1.1538540169450204 1.0613936325179743 0.9571302220656428 1.1341466808234468 1.0 12.57702243893673 -8.768762473861361 24.99833233429458 0.9797559386325988 1.0286190032375162 0.0 0.0686819920162576 238.91283264686248 815556.6548855137 0.009220862636668917 0.009913359626094667 1.7030897146099244e-09 8.768762473861361 0.048863064604917406 (ac)SETAPAAPAAPAPAEK ddPTM_A549_MK2206_60min_R1 1 SETAPAAPAAPAPAEK 16 0 P10412 P10412 HIST1H1E Histone H1.4 0 62.924 1.0715999999999999e-05 2533200.0 1736.5 1749.2 1554.7 1097.1 2121.2 1874.0 1808.2 1771.4 2515.7 1948.9 2533.3 False True 2029.578746651115 1838.2268085627247 1775.1798378486956 1365.88954925069 1809.1742899366488 2072.3054361394766 2136.726534280089 2022.5013746849813 1945.8979667473977 1508.6421364301657 1904.2116944768452 1.0658367200127465 0.9653479252829351 0.9322387017145175 0.7172992126938641 0.9500909458670737 1.0882747134418858 1.1221055623582459 1.0621200261248445 1.0218916165631495 0.7922659758922673 1.0 10.894978159103527 -7.013119675888209 24.809036430733144 1.0286828297921389 0.9129465467303768 0.13214039285690238 0.11075368899485234 577.9708868419366 1092933.3681162726 0.01288079990293469 0.023010432272400922 9.702425665629046e-08 7.013119675888209 -0.11573628306176209 (ac)SETAPAAPAAPAPAEKT(ph)PVK ddPTM_A549_MK2206_60min_R1 8 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.001)ET(0.001)APAAPAAPAPAEKT(0.999)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;S(0.015)ET(0.015)APAAPAAPAPAEKT(0.971)PVK;SETAPAAPAAPAPAEKT(1)PVK;S(0.002)ET(0.002)APAAPAAPAPAEKT(0.997)PVK;S(0.009)ET(0.009)APAAPAAPAPAEKT(0.982)PVK;SETAPAAPAAPAPAEKT(1)PVK 127.16 3.6364e-56 5611524400.0 46155.83 44118.189999999995 40991.35 41545.44 55401.26 44034.969999999994 45606.869999999995 42599.520000000004 65486.96000000001 64069.13 67689.25 True False 53945.80570229882 46363.61742697454 46804.53981231049 51724.07466504567 47251.80804360533 48694.72129735259 53893.047934112685 48638.13241555851 50654.26812118622 49595.86903505674 50880.1410967381 1.06025267500206 0.9112320922778826 0.9198979956309733 1.0165866986630994 0.9286886204534252 0.9570476859482291 1.0592157720562558 0.9559354861670514 0.9955606849611044 0.9747588738160222 1.0 15.634815050943772 (ac)SETAPAAPAAPAPAEKT(ph)PVK ddPTM_A549_PD325901_60min_R1 10 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.001)ET(0.001)APAAPAAPAPAEKT(0.999)PVK;S(0.022)ET(0.022)APAAPAAPAPAEKT(0.956)PVK;S(0.14)ET(0.14)APAAPAAPAPAEKT(0.72)PVK;S(0.021)ET(0.021)APAAPAAPAPAEKT(0.958)PVK;S(0.07)ET(0.07)APAAPAAPAPAEKT(0.859)PVK;SETAPAAPAAPAPAEKT(1)PVK;S(0.001)ET(0.001)APAAPAAPAPAEKT(0.999)PVK;S(0.001)ET(0.001)APAAPAAPAPAEKT(0.999)PVK;S(0.007)ET(0.007)APAAPAAPAPAEKT(0.986)PVK;S(0.001)ET(0.001)APAAPAAPAPAEKT(0.998)PVK 131.31 5.6127999999999983e-98 19718169600.0 138155.45 142741.38000000003 130600.77999999998 145108.16 163330.26 140027.51 140727.28 148126.83000000002 156192.92 164792.94999999998 174592.33000000002 True False 152180.88957933316 154770.69704351656 139464.1342970891 154071.1614786578 151858.5059964082 138887.17238453298 146082.73364932233 145172.32417239985 149628.6747479107 154387.89501325908 153118.58024196778 0.9938760491303353 1.0107897865754634 0.9108243694311883 1.006221199512069 0.991770598685226 0.9070562969239565 0.9540496876242781 0.9481039070698621 0.9772078248861626 1.0082897501353882 1.0 17.22428983236602 -9.66213879721821 1.1629205615094602 0.9954113245535323 0.9655284625698747 0.14823163716222842 0.033511222705735456 0.6443578217355176 1.7877433840980168 0.009193583860109716 0.006395676873149642 2.1770139040513491e-10 9.66213879721821 -0.029882861983657638 (ac)SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_A549_MK2206_60min_R1 7 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.007)ET(0.007)APAAPAAPAPAEKT(0.987)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;S(0.01)ET(0.01)APAAPAAPAPAEKT(0.98)PVKK;S(0.004)ET(0.004)APAAPAAPAPAEKT(0.992)PVKK;SETAPAAPAAPAPAEKT(1)PVKK 127.53 4.0552e-45 17311684400.0 54301.469999999994 61153.19 57202.24999999999 59374.5 77859.0 57450.11000000001 57300.4 56509.399999999994 95233.7 84294.3 83783.61 True False 63466.23059252119 64265.62616460664 65314.38919378686 73921.2551654226 66406.04423919365 63529.442507903375 67711.1409716086 64519.78050277945 73663.41900696883 65252.15908506604 62977.82732699916 1.0077551621936098 1.0204484481644762 1.037101341312643 1.1737663603668316 1.0544352998142377 1.0087588791852102 1.07515841440564 1.0244840643322612 1.16967228203169 1.0361132140405207 1.0 15.942556366323632 (ac)SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_A549_PD325901_60min_R1 8 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(0.999)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;S(0.002)ET(0.002)APAAPAAPAPAEKT(0.996)PVKK;S(0.004)ET(0.004)APAAPAAPAPAEKT(0.991)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;S(0.002)ET(0.002)APAAPAAPAPAEKT(0.995)PVKK;S(0.02)ET(0.02)APAAPAAPAPAEKT(0.96)PVKK 131.57 5.5816e-56 22951271100.0 79008.16 92105.43000000001 78085.92 101726.49 93797.56999999999 87034.32 91092.39000000001 98204.04 106466.8 96117.47000000002 93346.28 True False 87029.01024046692 99867.47783013464 83385.30009998231 108009.90424967889 87209.55226724978 86325.54135405678 94558.96074911837 96245.28338262116 101992.3706442702 90048.59654068999 81865.27933082261 1.0630759578645954 1.2199002879665755 1.0185673435867384 1.3193615795678684 1.065281313153903 1.054482951254707 1.1550557394057108 1.1756544919817358 1.2458562589411413 1.0999607804035958 1.0 16.320964085895636 -11.04701643136708 1.3689814111812182 1.000570747977811 1.157642715823263 0.10017380431002165 0.09252339994375935 0.424133051492545 1.4256885662696717 0.06053626754983552 0.013726397983123806 8.973948412648355e-12 11.04701643136708 0.15707196784545197 (ac)SETAPAAPAAPAPAEKT(ph)PVKKK ddPTM_A549_MK2206_60min_R1 7 SETAPAAPAAPAPAEKTPVKKK 22 3 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVKKK;S(0.006)ET(0.006)APAAPAAPAPAEKT(0.989)PVKKK;SETAPAAPAAPAPAEKT(1)PVKKK;SETAPAAPAAPAPAEKT(1)PVKKK;S(0.012)ET(0.012)APAAPAAPAPAEKT(0.976)PVKKK;SETAPAAPAAPAPAEKT(1)PVKKK;S(0.003)ET(0.003)APAAPAAPAPAEKT(0.994)PVKKK 103.16 2.4127999999999997e-28 2331429800.0 9188.730000000001 13691.61 13494.87 12496.77 17754.370000000003 13014.94 13615.140000000001 9972.970000000001 20783.600000000002 16495.56 20046.8 True False 10739.562981120356 14388.454467405374 15408.645486839405 15558.479211001322 15142.72569207173 14392.172312182032 16088.83470077326 11386.669038439706 16076.14778458926 12769.201539336027 15068.62629646643 0.712710154849269 0.9548617229149445 1.0225647105239255 1.0325081334487511 1.0049174618938341 0.9551084504336653 1.0677041413221633 0.7556540864716954 1.0668621988693883 0.8474031599237674 1.0 13.879260281846303 -5.264317801135652 2.856503282647503 1.008786177582034 0.6608889841334952 0.3266802697082585 0.09571621414209082 0.24589765411840386 2.7884901544589074 0.01105610757987208 0.19690195617915934 5.441043510666685e-06 5.264317801135652 -0.34789719344853876 (ac)SETAPAAPAAPAPAEKT(ph)PVKKK ddPTM_A549_PD325901_60min_R1 4 SETAPAAPAAPAPAEKTPVKKK 22 3 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVKKK;SETAPAAPAAPAPAEKT(1)PVKKK;SETAPAAPAAPAPAEKT(1)PVKKK;S(0.001)ET(0.001)APAAPAAPAPAEKT(0.999)PVKKK 102.05 1.3803000000000001e-40 3698397000.0 12048.6 14335.5 21480.5 22002.600000000002 13227.700000000003 35173.3 32069.9 31269.4 25803.600000000002 23059.8 23133.0 True False 13271.765002289474 15543.602895441634 22938.295902739803 23361.650630469823 12298.631985087677 34886.860306470466 33290.33759382266 30645.707286630233 24719.164426436128 21603.800292589905 20287.787652169114 0.6541750746721018 0.7661556381570149 1.1306455043799368 1.1515129708079364 0.6062086313178037 1.7195990467073161 1.6409052659945083 1.510549489774144 1.2184258259324408 1.0648672325925141 1.0 14.30832392984535 -7.234946318991063 24.999668242785134 1.2228392525520582 0.8874671301903643 0.3954119273941048 0.27896934350504665 953.3611132333531 899621.554519239 0.04684683422020593 0.08112686373617557 5.821751731389829e-08 7.234946318991063 -0.3353721223616939 (ac)SETAPAET(ph)ATPAPVEKS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.095)ET(0.121)APAET(0.695)AT(0.094)PAPVEKS(0.996)PAK 60.81399999999999 2.0024999999999998e-07 10995000.0 1687.3 2194.7 1870.2 1692.7 2288.0 1783.2 1820.9 2045.8 2926.6 2936.5 2853.4 True False 1972.074989475627 2306.4008556783742 2135.4224819866404 2107.411575988191 1951.4382308952722 1971.8970404076385 2151.733959888625 2335.798414999737 2263.7297728198632 2273.1426105121777 2144.8220301662755 0.9194585666031897 1.0753343742462271 0.995617562647421 0.9825577816471868 0.9098369018262968 0.9193755997810079 1.0032226122378154 1.089040667312922 1.0554394448495894 1.0598280782932625 1.0 11.06664222756238 -7.997965528167531 24.9537636680662 1.032316555335924 0.9705202963004611 0.3712006599209847 0.04882236437720022 72.1151753398456 884510.5921747623 0.00808422821548404 0.01112885755504172 1.0046955341459825e-08 7.997965528167531 -0.06179625903546282 (ac)SETAPAETAT(ph)PAPVEK ddPTM_A549_MK2206_60min_R1 2 SETAPAETATPAPVEK 16 0 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAET(0.003)AT(0.997)PAPVEK;S(0.002)ET(0.002)APAET(0.027)AT(0.97)PAPVEK 98.439 3.9510999999999996e-08 13344900.0 1610.1 2025.8600000000001 1890.06 2029.25 2457.0 2255.6 1862.9900000000002 1709.1 2752.8 2467.2 2819.3 True False 1881.8455168344135 2128.9676208523206 2158.0989286192207 2526.416341096495 2095.5785547682185 2494.286094853899 2201.471168066841 1951.3701588992344 2129.295195318294 1909.857806455182 2119.1900012783985 0.8880022629868924 1.0046138475398732 1.0183602826161648 1.1921613161502451 0.988858268255354 1.1769997467660873 1.038826705835157 0.9208094402682501 1.0047684228567517 0.9012206575640046 1.0 11.049297226602258 -8.022377255106864 24.48598756359913 0.9954260955824933 1.0511169698765856 0.13564413841750567 0.08739075522922386 1104.4971826777996 1208579.6652000633 0.012791710028791523 0.016590834667233184 9.497793979558038e-09 8.022377255106864 0.05569087429409236 (ac)SETAPAETAT(ph)PAPVEK ddPTM_A549_PD325901_60min_R1 2 SETAPAETATPAPVEK 16 0 P16401 P16401 HIST1H1B Histone H1.5 1 S(0.006)ET(0.006)APAET(0.075)AT(0.913)PAPVEK;SETAPAET(0.024)AT(0.976)PAPVEK 112.5 2.2571999999999998e-14 15747400.0 2037.6100000000001 2530.0 2275.4 2611.2 2618.9 2400.3 3158.2 3330.3 2587.6 2340.5 2369.8 True False 2244.4666671908 2743.2119790357715 2429.822327091743 2772.4878935345278 2434.9574987145243 2380.752752616928 3278.387029233353 3263.874553930189 2478.8521706213915 2192.72043056777 2078.329623399922 1.0799377740279212 1.3199118889275003 1.1691226934045316 1.333998160021911 1.171593510143592 1.1455125913676167 1.577414377547228 1.5704316183449494 1.1927136786734809 1.0550397809278766 1.0 11.021208768707675 -9.657821564684294 1.3431650551115708 1.0428316281398633 1.2908507773741835 0.2848262286661798 0.1564555645530958 0.3461355949556096 1.2687244971336602 0.04269444562209809 0.031033187414974094 2.1987630765159934e-10 9.657821564684294 0.24801914923432022 (ac)SETAPAETAT(ph)PAPVEKS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.021)ET(0.026)APAET(0.101)AT(0.852)PAPVEKS(1)PAK 75.529 9.120599999999999e-11 13630000.0 2350.4 2420.0 2543.2 2337.1 3065.9 2649.4 2075.3 2329.2 3851.9 3044.6 4137.0 True False 2747.09005823713 2543.1676633442667 2903.8640018117953 2909.689604916405 2614.9101713731707 2929.757749470613 2452.3551468816886 2659.3712328758393 2979.450800220337 2356.8227454334665 3109.668724608497 0.8834027999503339 0.8178259128436415 0.9338177982856961 0.9356911821154619 0.8408967008864856 0.9421446491344396 0.7886226360624432 0.8551943851223736 0.9581248242432787 0.757901549699699 1.0 11.602545181795882 -8.89255188257655 3.8976923332253723 0.9823686967769594 0.875184543289578 0.0 0.08251898802684936 0.13267308753312798 3.615413940155838 0.008475760526750805 0.008904013951263076 1.2807020875422164e-09 8.89255188257655 -0.10718415348738142 (ac)SETAPAETAT(ph)PAPVEKS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.016)ET(0.022)APAET(0.163)AT(0.799)PAPVEKS(1)PAK;S(0.086)ET(0.107)APAET(0.123)AT(0.685)PAPVEKS(1)PAK 90.836 1.6533e-17 68737000.0 8794.2 9654.9 9205.1 10738.9 11091.2 10016.0 10148.8 10094.9 11293.6 11920.400000000001 13115.2 True False 9686.980710052136 10468.5523068745 9829.813440763031 11402.217463188555 10312.192374562803 9934.433016794215 10535.018137636453 9893.549300204151 10818.969266551914 11167.743909651816 11502.11354410274 0.8421913653442203 0.9101416245575008 0.854609320545517 0.9913149804571871 0.8965476071004339 0.863705003319821 0.9159201999912331 0.8601505507895706 0.9406070653944221 0.9709297223359128 1.0 13.489611364147732 -9.503871006819011 0.8448848536393069 0.9908774700055726 0.8940701685973607 0.42434459232568 0.0407641339707284 0.30781350082456477 0.4686543493550778 0.012614854242738631 0.008487328986189075 3.134216504094101e-10 9.503871006819011 -0.09680730140821192 (ac)SETAPAETAT(ph)PAPVEKS(ph)PAKK ddPTM_A549_MK2206_60min_R1 1 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.084)ET(0.106)APAET(0.151)AT(0.66)PAPVEKS(0.999)PAKK 65.801 4.6477999999999997e-10 29032000.0 2313.1 2690.3 2155.4 2291.9 3285.4 2416.6 2138.2 2228.9 4006.0 3653.8 2903.2 True False 2703.4947301345774 2827.2247787996203 2461.0681305068983 2853.4156028872994 2802.1220121430642 2672.3230079907457 2526.6832626908977 2544.85340071997 3098.647396267468 2828.40404232569 2182.2553157561956 1.238853543219695 1.2955517891910506 1.1277636089313814 1.3075535123160111 1.2840486591607052 1.2245693657823589 1.1578311870512505 1.1661574987792511 1.4199289028624609 1.2960921767055433 1.0 11.091604186152717 -11.06822521992925 1.3893498036769427 1.0003251817637477 1.263911345718932 0.0 0.11659763402948181 0.2685303469981159 0.9269394522675611 0.06543896072464676 0.01454558422754852 8.54623400462142e-12 11.06822521992925 0.2635861639551842 (ac)SETAPAETAT(ph)PAPVEKS(ph)PAKK ddPTM_A549_PD325901_60min_R1 1 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 2 S(0.096)ET(0.113)APAET(0.34)AT(0.454)PAPVEKS(0.997)PAKK 83.236 1.3090999999999999e-17 61173000.0 5352.8 5594.2 5344.4 5972.6 6793.4 6190.3 7232.3 6774.2 6090.0 7296.7 6637.6 True False 5896.212315476913 6065.642866846606 5707.103122487957 6341.513937241241 6316.25501995771 6139.888249187423 7507.529134166412 6639.083266742903 5834.058478545474 6835.985116737389 5821.217279213151 1.012883050514462 1.041988741513956 0.9803968566621484 1.0893793571124728 1.0850402445056084 1.0547430124472774 1.2896837163207895 1.1404974163136377 1.0022059302576072 1.174322274680907 1.0 12.50710515240993 -8.78939907102736 22.846581869921035 1.001041612603714 1.0875022818354843 0.0 0.09239652120444412 98.99684318352476 80892.13997014327 0.013992174128945111 0.01489760678969176 1.6240557331993058e-09 8.78939907102736 0.0864606692317702 (ac)SETAPAETATPAPVEKS(ph)PAK ddPTM_A549_MK2206_60min_R1 11 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAK;SETAPAETAT(0.001)PAPVEKS(0.999)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETAT(0.006)PAPVEKS(0.994)PAK;SETAPAETAT(0.005)PAPVEKS(0.995)PAK;S(0.001)ET(0.001)APAET(0.004)AT(0.02)PAPVEKS(0.974)PAK;SETAPAETAT(0.006)PAPVEKS(0.994)PAK;SETAPAETAT(0.001)PAPVEKS(0.999)PAK;SETAPAETAT(0.002)PAPVEKS(0.998)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAET(0.001)AT(0.015)PAPVEKS(0.984)PAK 234.38 1.911299999999999e-284 12325128400.0 57418.979999999996 59467.7 57457.84 48535.399999999994 71709.23 56661.61 54556.58000000001 56164.270000000004 79760.73000000001 80105.28999999998 82912.65 True False 67109.90006471948 62494.35192291647 65606.22569906498 60426.575178836916 61160.89725964264 62657.503961267335 64468.80439419001 64125.727268363145 61695.052006713115 62009.44935345984 62323.1507322723 1.0768053167435339 1.0027469919064205 1.0526782572481952 0.9695686830471282 0.9813511759438726 1.005364831929492 1.0344278753032723 1.0289230649431438 0.9899219035273527 0.9949665353062771 1.0 15.927480549902224 -2.00000012714149 0.8921706924142967 0.9998179918554014 36.09537040271903 0.4173875173042204 0.02350681030605945 568.8068346709983 1.2367099737926022 0.0035466623981084723 40640.66758591488 0.009999997072459438 2.00000012714149 35.095552410863625 (ac)SETAPAETATPAPVEKS(ph)PAK ddPTM_A549_PD325901_60min_R1 9 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAK;SETAPAETAT(0.014)PAPVEKS(0.986)PAK;SETAPAETAT(0.004)PAPVEKS(0.996)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAET(0.001)AT(0.001)PAPVEKS(0.998)PAK;SETAPAET(0.001)AT(0.018)PAPVEKS(0.98)PAK;SETAPAETAT(0.008)PAPVEKS(0.992)PAK;SETAPAET(0.002)AT(0.041)PAPVEKS(0.956)PAK 243.41 2.3990999999999986e-256 18017643200.0 143140.37999999998 140181.58000000002 141481.71000000002 140411.84 162192.86000000002 144792.11 155621.08 157232.03000000003 164045.26 158022.25000000003 173923.59000000003 True False 157671.88600322188 151995.17371389765 151083.5096392363 149084.76045837416 150800.99304859116 143612.9710618312 161543.32535852242 154095.91381550868 157151.0082049585 148044.698166754 152532.09102247568 1.0336964827944886 0.9964799714933501 0.9905031041433376 0.9773993096076186 0.9886509260950901 0.9415262722692875 1.0590776293410868 1.010252418245565 1.030281609276583 0.9705806638744601 1.0 17.218753275724797 -7.7672212526935835 24.99929265726384 1.0173479845771358 0.9880818880090474 0.16752882980051453 0.028422266616633586 155.95392414637362 674302.8756738512 0.0039088744815310925 0.005479528789404641 1.709144364267734e-08 7.7672212526935835 -0.02926609656808843 (ac)SETAPAETATPAPVEKS(ph)PAKK ddPTM_A549_MK2206_60min_R1 7 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETAT(0.002)PAPVEKS(0.998)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAETAT(0.019)PAPVEKS(0.98)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAET(0.017)AT(0.065)PAPVEKS(0.918)PAKK;SETAPAETATPAPVEKS(1)PAKK 155.39 4.9954e-56 10959063400.0 35913.67 45768.61000000001 36623.270000000004 43324.95999999999 53141.26 37929.4 36094.34 35390.71 72618.45 60205.41 56591.82 True False 41975.019491069215 48098.03675546079 41817.00038598377 53939.577144931354 45324.251049801474 41943.06393250199 42652.214365295404 40407.45152200381 56170.48702283554 46604.96606652682 42538.509239224964 0.9867534204128585 1.1306939903551994 0.9830386897391343 1.268017570657916 1.065487527898786 0.986002205592717 1.0026729927330313 0.9499028584843754 1.320462047857579 1.09559471876255 1.0 15.376481854529683 -8.732920804216956 24.998467155076625 1.151329452739471 1.0517874048327618 0.11745901632990507 0.11031299701347798 381.1166160570395 334074.4824489537 0.02339666699278283 0.026526869516676363 1.8496058731606439e-09 8.732920804216956 -0.09954204790670929 (ac)SETAPAETATPAPVEKS(ph)PAKK ddPTM_A549_PD325901_60min_R1 7 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAKK;SETAPAETAT(0.002)PAPVEKS(0.998)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAETAT(0.001)PAPVEKS(0.999)PAKK;SETAPAETAT(0.001)PAPVEKS(0.999)PAKK;SETAPAETATPAPVEKS(1)PAKK 151.91 6.676e-46 15931036200.0 33354.08 54071.59 33721.23 66061.29000000001 56095.399999999994 42135.63 39836.16 39760.75 70518.27 50782.97 48192.39000000001 True False 36740.16164762409 58628.39265356164 36009.75545002896 70141.7458472248 52155.45262262429 41792.4913993036 41352.1468679832 38967.69064954506 67554.63234578962 47576.524607524145 42265.03154673058 0.8692803554873043 1.3871607451360546 0.8519987832072139 1.6595692296993123 1.234009551488405 0.9888195955347979 0.978400946471836 0.9219841846435204 1.5983575517055382 1.1256711012961362 1.0 15.367176906297383 -8.730314674054673 24.999551417230542 1.2825581583184809 1.125787760558751 0.036602114245739115 0.2683126237157003 498.1855392960799 400145.4737338739 0.05117467298067432 0.05802390040488668 1.8607384244276066e-09 8.730314674054673 -0.1567703977597299 (ac)SETAPAETATPAPVEKS(ph)PAKKK ddPTM_A549_MK2206_60min_R1 4 SETAPAETATPAPVEKSPAKKK 22 3 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETAT(0.001)PAPVEKS(0.999)PAKKK;SETAPAETAT(0.001)PAPVEKS(0.999)PAKKK;SETAPAETATPAPVEKS(1)PAKKK;SETAPAET(0.007)AT(0.005)PAPVEKS(0.988)PAKKK 131.57 1.0350999999999998e-40 1173540000.0 5572.38 10731.6 10286.7 9328.3 14111.1 7445.999999999999 7480.3 5307.72 14941.2 13424.1 13431.800000000001 True False 6512.861512389131 11277.792601630312 11745.508739948646 11613.733918763295 12035.375882861139 8233.930777745221 8839.37368342846 6060.1055642107785 11557.042056193586 10391.586486557646 10096.31336117873 0.6450732341006464 1.1170208568401294 1.1633462948080857 1.1502945187318758 1.1920564915445557 0.815538353772324 0.875505084600155 0.6002295439355568 1.1446794134412956 1.0292456379686339 1.0 13.301540972875058 -5.253479790580513 23.840983668380858 1.0334870815178239 0.6450728602727627 0.2534369791522868 0.17485181489560886 531.6674986833291 1592404.8868851012 0.024930740505446806 0.364207487798635 5.57853560643517e-06 5.253479790580513 -0.3884142212450612 (ac)SETAPAETATPAPVEKS(ph)PAKKK ddPTM_A549_PD325901_60min_R1 4 SETAPAETATPAPVEKSPAKKK 22 3 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETAT(0.001)PAPVEKS(0.998)PAKKK;S(0.003)ET(0.003)APAET(0.001)AT(0.006)PAPVEKS(0.986)PAKKK;SETAPAETAT(0.001)PAPVEKS(0.999)PAKKK;SETAPAETAT(0.001)PAPVEKS(0.999)PAKKK 126.75 5.114799999999999e-61 1684609000.0 8037.919999999999 7865.959999999999 11792.0 13409.099999999999 8250.02 31216.6 22242.4 18440.4 17471.7 10816.0 12005.8 True False 8853.923721196043 8528.852054789024 12592.276031056443 14237.349652724346 7670.567056223916 30962.38235943075 23088.846703508305 18072.591755786056 16737.42520847339 10133.075914129886 10529.162711036704 0.8408953270249427 0.8100218686761343 1.1959427712003325 1.3521825090423103 0.7285068401672244 2.940631008292414 2.1928473647108233 1.7164319948102145 1.5896254685977227 0.9623819283852799 1.0 13.362103096002098 -6.1029193718620505 1.328093908656966 1.4791408582085002 0.7951993302167442 0.18981709925379298 0.5848958397718994 0.8241886999533968 2.528881966717934 0.09407595303220234 0.4950378129952002 7.890065855788292e-07 6.1029193718620505 -0.683941527991756 (ac)SETAPAETATPAPVEKSPAK ddPTM_A549_PD325901_60min_R1 1 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 0 121.31 4.0396e-21 9929100.0 2624.8 2783.3 2826.9 3248.5 3099.4 3340.1 2971.0 3343.2 3608.4 3960.6 3753.1 False True 2891.267763724367 3017.8584589921984 3018.7504335306535 3449.152467121212 2881.7088363495354 3312.8993330066255 3084.0630307935826 3276.517253310335 3456.7514965490127 3710.527040079774 3291.4924928611044 0.8784063065600841 0.9168662743535375 0.9171372682994114 1.0478992355601768 0.8755021749554811 1.006503687974969 0.936980119955487 0.9954503193966722 1.0502079236232005 1.1273083709373515 1.0 11.684526191965986 -5.585234567386557 0.333355489550572 1.024131760553473 0.8047201552688329 0.4451200185888474 0.05661429566591754 3.6557397795121336 0.32632296066438415 0.016030814125323332 0.3118200330180146 2.5987555666190396e-06 5.585234567386557 -0.2194116052846401 (ac)SETAPLAPTIPAPAEK ddPTM_A549_MK2206_60min_R1 2 SETAPLAPTIPAPAEK 16 0 P16402 P16402 HIST1H1D Histone H1.3 0 ; 51.218 0.00066375 2735280.0 2198.5 3191.6000000000004 2681.7 2504.0 3211.1 2788.3 2274.1 2223.79 4518.8 3387.8 4463.3 False True 2569.553051835573 3354.0388075742017 3062.005384420688 3117.4801124088312 2738.7514437184473 3083.356055276255 2687.274533572807 2539.0190425712517 3495.2990150407973 2622.4936270707135 3354.939429186635 0.7659014733564148 0.9997315535402522 0.9126857426344162 0.9292209824380129 0.8163340953021094 0.9190496938491012 0.8009904769649759 0.756800263063708 1.0418366974476767 0.7816813633820225 1.0 11.712071004589514 -8.78559657053673 24.99973888429428 1.0197562430416556 0.8693384965128176 0.0 0.10150726820446718 139.95777819563077 144838.51136908974 0.01233863087232886 0.013138664007816044 1.638337716925964e-09 8.78559657053673 -0.150417746528838 (ac)SETAPLAPTIPAPAEK ddPTM_A549_PD325901_60min_R1 2 SETAPLAPTIPAPAEK 16 0 P16402 P16402 HIST1H1D Histone H1.3 0 ; 67.456 2.9846e-07 4353800.0 3681.3999999999996 3555.6 3195.6 3764.8999999999996 3834.3999999999996 3380.9 3937.8 3925.2999999999997 3366.2 3980.5 3769.7 False True 4055.133017896557 3855.2428903792857 3412.4726327038634 3997.449322291719 3565.084971961882 3353.3670713338224 4087.65513384684 3847.006812161723 3224.730320275827 3729.17055068362 3306.0507980971743 1.2265791621322102 1.1661172576653098 1.032190017971878 1.2091312464383441 1.0783515407608972 1.014312022448016 1.2364163116306395 1.1636260442144144 0.9754025322695732 1.1279834395859785 1.0 11.690893176745384 -8.76458127357737 24.996049912985207 0.9883845199854884 1.1372229786057149 0.19770317266453208 0.0819771803858863 49.17237156526446 391200.51809679344 0.011843556246867505 0.012869276045517164 1.7195655127917887e-09 8.76458127357737 0.1488384586202265 (ac)SETAPLAPTIPAPAEKT(ph)PVK ddPTM_A549_MK2206_60min_R1 4 SETAPLAPTIPAPAEKTPVK 20 1 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPT(0.001)IPAPAEKT(0.999)PVK;SETAPLAPT(0.002)IPAPAEKT(0.998)PVK;S(0.001)ET(0.001)APLAPT(0.01)IPAPAEKT(0.989)PVK;SETAPLAPT(0.001)IPAPAEKT(0.999)PVK 97.542 3.3713000000000006e-27 835650100.0 18116.100000000002 19562.3 18080.6 16457.600000000002 23706.1 18527.5 18203.600000000002 19779.899999999998 26495.5 25116.2 26416.999999999996 True False 21173.654783879203 20557.937512660967 20644.700955944627 20489.71273880973 20218.964093280785 20488.067752440857 21510.958488784978 22583.76139840321 20494.311554619246 19442.432976041524 19856.929827890413 1.0663106012561598 1.0353029240092262 1.0396723529207288 1.0318671071713477 1.0182321370185772 1.031784265242453 1.0832973010042755 1.1373239264149877 1.0320987046967143 0.9791258338805882 1.0 14.277354957880059 -9.43104772000505 2.0010064863781074 1.0096730630055064 1.052925397910428 0.3234670485892659 0.03328729782931869 0.31841951612339864 2.586498702189752 0.007524382742730488 0.006407369238170683 3.706399938551755e-10 9.43104772000505 0.04325233490492164 (ac)SETAPLAPTIPAPAEKT(ph)PVK ddPTM_A549_PD325901_60min_R1 5 SETAPLAPTIPAPAEKTPVK 20 1 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.004)ET(0.004)APLAPT(0.005)IPAPAEKT(0.987)PVK;S(0.001)ET(0.001)APLAPT(0.007)IPAPAEKT(0.99)PVK;SETAPLAPT(0.002)IPAPAEKT(0.998)PVK;S(0.015)ET(0.015)APLAPT(0.018)IPAPAEKT(0.951)PVK;S(0.051)ET(0.051)APLAPT(0.02)IPAPAEKT(0.878)PVK 85.376 1.4150999999999998e-21 1077420000.0 14508.5 13165.400000000001 13036.800000000001 13684.7 16533.5 14136.6 12996.3 14674.2 15300.7 14335.9 16092.6 True False 15981.392239406814 14274.894461975322 13921.555644646922 14529.972838791347 15372.243997478561 14021.476216574798 13490.881308348242 14381.511569312805 14657.664788617532 13430.728827420002 14113.3122193964 1.132362976951863 1.0114489242544251 0.9864130707399825 1.0295225254651643 1.0892017237705525 0.9934929518036603 0.95589760210982 1.0190032889336784 1.038570149994486 0.9516354926919067 1.0 13.784768989860506 -7.311281754406398 24.997628773921797 1.0119655250351216 1.0430130881455257 0.22126282191992896 0.045250537965001766 649.6279452052863 325808.8433366922 0.00637072673191833 0.010184311262204064 4.883354423430358e-08 7.311281754406398 0.03104756311040413 (ac)SETAPLAPTIPAPAEKT(ph)PVKK ddPTM_A549_MK2206_60min_R1 2 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPT(0.002)IPAPAEKT(0.998)PVKK 149.3 7.360699999999999e-77 8925600000.0 42281.0 50338.0 44851.0 49831.0 61058.0 48530.0 44361.0 41992.0 83223.0 71063.0 65920.0 True False 49416.999128796844 52899.98918901805 51211.546219432545 62039.59723699861 52076.4490830435 53665.412388393146 52420.81948191518 47944.49459510653 64373.12337982217 55009.818944603096 49550.24470055408 0.9973108998237551 1.0676029857916425 1.0335276148264891 1.252054305925655 1.0509826822805008 1.0830504009154378 1.057932605554398 0.9675934979705642 1.2991484455595905 1.1101825889466892 1.0 15.596604561631327 -8.725053639470845 24.999988873292335 1.141264937122291 1.0691772700869733 0.10398561545903562 0.09376014032866789 378.73988139988325 260225.04833639873 0.020713712416027857 0.023486815014284998 1.8834164554009164e-09 8.725053639470845 -0.07208766703531766 (ac)SETAPLAPTIPAPAEKT(ph)PVKK ddPTM_A549_PD325901_60min_R1 2 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPTIPAPAEKT(1)PVKK 138.54 3.0252999999999996e-76 11280100000.0 53616.0 53788.0 52733.0 55457.0 59749.0 58867.0 63370.0 62631.0 59902.0 62268.0 66681.0 True False 59059.05684998691 58320.9035290024 56311.77848928926 58882.452938014794 55552.436362860026 58387.60666929167 65781.58002739454 61381.775571931015 57384.52725481626 58336.38785327665 58479.659725685815 1.0099076692138584 0.9972852749583684 0.9629293117202533 1.0068877489065153 0.9499445896820075 0.9984258961692674 1.1248625647953543 1.0496260727209825 0.9812732755969074 0.997550056325888 1.0 15.835647296286211 -5.245886149980541 18.90825862750747 1.0003981210006527 1.0099078198584792 0.0 0.04501917194614292 882.0382684729408 1071708.4694766824 0.006344988768162226 0.14188212097082062 5.676934063654739e-06 5.245886149980541 0.009509698857826487 (ac)SETAPLAPTIPAPAEKT(ph)PVKKK ddPTM_A549_MK2206_60min_R1 2 SETAPLAPTIPAPAEKTPVKKK 22 3 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPTIPAPAEKT(1)PVKKK;SETAPLAPTIPAPAEKT(1)PVKKK 112.99 1.0283e-40 488230000.0 8304.8 12259.099999999999 12891.0 11042.6 17492.2 12718.400000000001 11180.8 9938.7 21401.4 17869.2 18923.6 True False 9706.44720713399 12883.03582715029 14719.137640514255 13748.037495721148 14919.120551777221 14064.252646209348 13212.206633380598 11347.54116099223 16554.017071013128 13832.535309301622 14224.34785520941 0.6823825813272121 0.9057030915081363 1.0347847079065657 0.9665144325534881 1.0488439050872456 0.988744987775209 0.9288444551461013 0.7977547565976039 1.163780388353658 0.9724547972324585 1.0 13.796074890244926 -4.732146419731836 1.0444856337599895 1.0365469242464689 4.327351853960845e-12 0.4055309497035592 0.09428748778086052 3.0865764104455224 1.2278825919285727 0.01614589776413271 4.651940137301979 1.8529068218795625e-05 4.732146419731836 -1.0365469242421415 (ac)SETAPLAPTIPAPAEKT(ph)PVKKK ddPTM_A549_PD325901_60min_R1 4 SETAPLAPTIPAPAEKTPVKKK 22 3 P16402 P16402 HIST1H1D Histone H1.3 1 S(0.002)ET(0.002)APLAPT(0.003)IPAPAEKT(0.993)PVKKK;S(0.002)ET(0.002)APLAPT(0.002)IPAPAEKT(0.993)PVKKK;SETAPLAPT(0.002)IPAPAEKT(0.997)PVKKK;SETAPLAPT(0.001)IPAPAEKT(0.999)PVKKK 86.98200000000001 2.0616999999999997e-22 721938300.0 13169.4 14343.399999999998 17705.199999999997 18558.9 15123.2 29232.6 24657.0 23005.4 21772.5 20755.7 21243.399999999998 True False 14506.347793200126 15552.168656166667 18906.78134201666 19705.241102679964 14060.99860420768 28994.539397637625 25595.33562782813 22546.539249612833 20857.477540908276 19445.181559810077 18630.596473007798 0.7786303468177777 0.8347649351269462 1.0148242633782016 1.0576817082174004 0.75472616373713 1.556286157539036 1.3738333963118636 1.2101888032558965 1.1195281681467797 1.0437229740863347 1.0 14.185386243570008 -5.832131238004819 1.0095648223838618 1.1136295979181372 0.7313186339217704 0.30785635266369626 0.1941806321190011 1.0319929029373975 1.3867708832035062 0.03149355051629118 0.34168934361456876 1.4718676564318634e-06 5.832131238004819 -0.38231096399636677 (ac)SFTTRS(ph)TFSTNYR ddPTM_A549_PD325901_60min_R1 1 SFTTRSTFSTNYR 13 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.006)FT(0.006)T(0.09)RS(0.651)T(0.068)FS(0.147)T(0.033)NYR 89.301 2.9045e-22 32008000.0 2483.4 2261.0 2344.5 2617.8 2571.9 2614.6 2271.1 2444.0 2325.0 2272.7 3083.4 True False 2735.5129398175477 2451.5424049801913 2503.6118686237955 2779.4955605448395 2391.2586165733273 2593.3075644678684 2357.527953293605 2395.252502719092 2227.288335405293 2129.2013341385914 2704.1613472830263 1.0115938320640598 0.9065814092207735 0.9258367187073617 1.027858623649622 0.8842884389927087 0.9590062246372477 0.8718148255695997 0.8857653797639305 0.8236521602688885 0.7873795460754888 1.0 11.400965519115223 -6.8016515724396465 24.99933965491058 0.9104798086082287 0.9605739743702992 0.21069476076943405 0.06543929743769178 280.8442092539331 174595.9914847231 0.010360528907970675 0.019579751259393447 1.5788774700054718e-07 6.8016515724396465 0.050094165762070486 (ac)SGAGVAAGTRPPS(ph)SPTPGSR ddPTM_A549_PD325901_60min_R1 1 SGAGVAAGTRPPSSPTPGSR 20 1 F8WCQ0;F8WB40;F8WEI8;C9JC78;B8ZZB0;E9PG54;F5GZA4;E7ESC5;Q96AQ1-2;Q96LY2-2;Q96AQ1;Q96LY2 F8WCQ0 CCDC74B;CCDC74A Coiled-coil domain-containing protein 74A;Coiled-coil domain-containing protein 74B 1 S(0.226)GAGVAAGT(0.205)RPPS(0.459)S(0.089)PT(0.019)PGS(0.002)R 41.86 5.8508e-15 3301000.0 505.79 524.37 512.75 532.37 689.64 431.42 344.19 307.15 517.17 510.53 401.14 True False 557.1374284570816 568.5605001766754 547.5482984162304 565.2532858000064 641.2020655288419 427.90665855684495 357.288338797995 301.0236522954862 495.43514340712017 478.2950486724053 351.8023230359711 1.5836661442400861 1.6161362871914329 1.5564089903984082 1.6067355124946416 1.822620328357753 1.216326984040672 1.015594029381844 0.855661354642923 1.4082770663127853 1.359556254617172 1.0 8.458621199080932 -7.361770337305527 6.12308160679585 1.1538256494188384 1.6286809759365404 0.7005294404443154 0.16116372056364034 0.1251613075511171 6.434069303187301 0.028312784103131552 0.04545584396773075 4.34740061720165e-08 7.361770337305527 0.474855326517702 (ac)SGDEMIFDPTMSK ddPTM_A549_PD325901_60min_R1 6 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ;;;;; 65.5 5.4425e-09 39850300.0 12572.169999999998 12830.76 12096.02 12611.92 13846.18 14029.77 12623.710000000001 14364.7 14379.869999999999 13197.119999999999 14729.48 False True 13848.487443257603 13912.053174756136 12916.928656477217 13390.929654651494 12873.672083527852 13915.51620467542 13104.112192009168 14078.184789610856 13775.534071244943 12363.85159096541 12917.847337866775 1.0720429713287285 1.0769637394595144 0.9999288827801158 1.0366223802163963 0.9965802928937371 1.077231820497222 1.014419186825067 1.0898243663510965 1.066395484552909 0.9571139267703368 1.0 13.657078055329329 -10.917354127840134 1.2124243287232217 1.0003914650621843 1.0481527545312812 0.34505235258345124 0.033926237390359694 0.5330912057966308 1.4104107074766445 0.02071838829169666 0.00507740573210271 1.2096114026985258e-11 10.917354127840134 0.04776128946909686 (ac)SGDHLHNDS(ph)QIEADFR ddPTM_A549_MK2206_60min_R1 1 SGDHLHNDSQIEADFR 16 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 S(0.068)GDHLHNDS(0.932)QIEADFR 43.184 3.6327e-05 2840500.0 150.38 137.53 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 175.76046756198934 144.52968956187482 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SGDHLHNDS(ph)QIEADFR ddPTM_A549_PD325901_60min_R1 4 SGDHLHNDSQIEADFR 16 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 S(0.031)GDHLHNDS(0.969)QIEADFR;S(0.031)GDHLHNDS(0.969)QIEADFR;S(0.154)GDHLHNDS(0.846)QIEADFR;S(0.115)GDHLHNDS(0.885)QIEADFR 87.566 9.0738e-21 44586400.0 153.55 0.0 0.0 167.88 123.57 184.94 177.1 0.0 0.0 119.71 141.05 True False 169.13828296246442 0.0 0.0 178.2495663168568 114.89086949335741 183.43390995666155 183.83963741283847 0.0 0.0 112.1514901701636 123.70174418961898 1.3673071796238947 0.0 0.0 1.4409624333479323 0.9287732379686124 1.4828724619717633 1.4861523466559678 0.0 0.0 0.9066282040312195 1.0 6.950722032174484 -8.268484007393964 24.939671190132174 0.47500001757116533 0.9219542739436316 0.13521115744461998 0.5810555773553606 1018.6948627344552 3606417.8879534174 0.10672316427930804 0.13042679459139048 5.389096899995391e-09 8.268484007393964 0.4469542563724663 (ac)SGEDEQQEQTIAEDLVVTK ddPTM_A549_MK2206_60min_R1 2 SGEDEQQEQTIAEDLVVTK 19 0 Q9UQ80;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 107.45 8.2382e-34 6277200.0 1490.8 1888.1100000000001 1488.92 1740.6799999999998 2178.33 1397.9399999999998 1706.3999999999999 1549.86 3048.0 2088.56 2631.4300000000003 False True 1742.410593439379 1984.206734230142 1700.071244722248 2167.1466781420936 1857.9005426163012 1545.8690829225293 2016.430792000631 1769.5574012471857 2357.632866655827 1616.7528454320836 1977.9733072266215 0.8809070309864129 1.003151421194991 0.8595016113265811 1.095640001927386 0.9392950530871025 0.7815419334905186 1.019442873487475 0.8946315881928345 1.1919437224163243 0.8173784952128518 1.0 10.94980724170369 -8.747452812417395 24.998905007713645 1.0906400966133747 0.9373635719992347 0.0 0.12233576916702002 199.0936022260448 355849.8943128938 0.016942060856925744 0.019164627231123197 1.7887398712617712e-09 8.747452812417395 -0.15327652461414 (ac)SGEDEQQEQTIAEDLVVTK ddPTM_A549_PD325901_60min_R1 2 SGEDEQQEQTIAEDLVVTK 19 0 Q9UQ80;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 145.17 9.211899999999998e-127 25556000.0 3041.69 3184.1 3675.8999999999996 3814.6400000000003 3763.7 3263.6 3143.1000000000004 4052.5 4204.6 3647.2999999999997 3961.8 False True 3350.480129626171 3452.4352815999205 3925.3686789823914 4050.2616491239833 3499.350696060125 3237.0223236431307 3262.7123904703158 3971.669708375252 4027.8952838903647 3417.0088555478897 3474.5237159194053 0.964299110774551 0.9936427446966958 1.1297573422789795 1.1657026920169489 1.0071454340711414 0.9316449068434611 0.9390387452304261 1.1430832059594376 1.1592654456308784 0.9834466922450416 1.0 11.762599512922781 -8.276753873503246 24.942486932700554 1.0824006874563148 1.023907150038943 0.0759174492930953 0.08417921695212431 1681.4505361179147 2738549.773645291 0.01572110233601642 0.019034632646313006 5.287448209533325e-09 8.276753873503246 -0.058493537417371844 (ac)SGGGPS(ph)GGGPGGSGR ddPTM_A549_PD325901_60min_R1 1 SGGGPSGGGPGGSGR 15 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 S(0.352)GGGPS(0.612)GGGPGGS(0.036)GR 50.843 0.0012964 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SGGSSCSQT(ph)PSR ddPTM_A549_MK2206_60min_R1 1 SGGSSCSQTPSR 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 S(0.001)GGS(0.001)SCS(0.116)QT(0.441)PS(0.441)R 42.095 0.00018598 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SGGSSCSQT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 SGGSSCSQTPSR 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 SGGSSCSQT(0.93)PS(0.07)R;SGGSSCSQT(0.949)PS(0.051)R 130.56 3.5716e-16 58905000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SGGSSCSQTPS(ph)R ddPTM_A549_PD325901_60min_R1 1 SGGSSCSQTPSR 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 SGGSSCS(0.001)QT(0.402)PS(0.597)R 72.958 8.271299999999999e-05 3384000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SGNGNAAATAEENS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SGNGNAAATAEENSPK 16 0 F5H4X2;F5H226;A0A3F2YNY7;P08397-3;P08397 F5H4X2 HMBS Porphobilinogen deaminase 1 SGNGNAAATAEENS(1)PK;SGNGNAAATAEENS(1)PK 91.355 1.0073e-20 9798000.0 274.43 705.23 606.48 676.14 602.23 771.54 419.39 446.90000000000003 681.9 717.6500000000001 899.2 True False 320.7470748306739 741.1231947191231 692.4879835714135 841.7943303530778 513.6427647692573 853.1838506931973 495.5877343279098 510.24944357385004 527.4507387705407 555.5323665704286 675.9038233425086 0.4745454364268894 1.0964920882590794 1.0245362722567422 1.2454350771241391 0.7599346934141739 1.262285877410777 0.7332222680397161 0.7549142732327546 0.7803635969421931 0.8219103774604885 1.0 9.400674164894308 (ac)SGNGNAAATAEENS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SGNGNAAATAEENSPK 16 0 F5H4X2;F5H226;A0A3F2YNY7;P08397-3;P08397 F5H4X2 HMBS Porphobilinogen deaminase 1 SGNGNAAATAEENS(1)PK;SGNGNAAATAEENS(1)PK 96.773 1.0307999999999998e-39 11306500.0 1005.38 1305.41 1224.21 1404.2199999999998 1133.78 1575.8899999999999 1328.68 1402.04 1361.81 1115.3000000000002 1239.9299999999998 True False 1107.4454374783618 1415.421482036794 1307.2922523727614 1490.9554801849927 1054.147204128662 1563.056474324664 1379.2436444815946 1374.0752123208968 1304.577861521841 1044.8797676617114 1087.4264705638727 1.0184094901645244 1.3016250021050557 1.2021891022156925 1.371086248628723 0.9693963064758262 1.4373904964021693 1.268355775601456 1.26360287294495 1.1996929418550635 0.9608739495921051 1.0 10.086702136989661 -10.24589342472254 0.7546561504890344 1.0044244473624164 1.2334649901737234 0.33445737331926473 0.13110739437452615 0.570948509308501 0.6178327734381538 0.07002353650809692 0.024329677229166822 5.6768389717608884e-11 10.24589342472254 0.22904054281130692 (ac)SGYS(ph)SDRDR ddPTM_A549_MK2206_60min_R1 1 SGYSSDRDR 9 1 P17844-2;P17844;J3QRQ7;J3QR02;J3KRX8;X6RLV5;J3QS79;J3QKN9 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 S(0.003)GY(0.002)S(0.498)S(0.498)DRDR 53.089 0.00053693 10515000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SGYS(ph)SDRDR ddPTM_A549_PD325901_60min_R1 1 SGYSSDRDR 9 1 P17844-2;P17844;J3QRQ7;J3QR02;J3KRX8;X6RLV5;J3QS79;J3QKN9 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 S(0.185)GY(0.32)S(0.457)S(0.038)DRDR 98.044 6.7825e-06 29373000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SGYSS(ph)DRDR ddPTM_A549_MK2206_60min_R1 3 SGYSSDRDR 9 1 P17844-2;P17844;J3QRQ7;J3QR02;J3KRX8;X6RLV5;J3QS79;J3QKN9 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 SGYS(0.021)S(0.979)DRDR;S(0.002)GY(0.001)S(0.033)S(0.964)DRDR;SGYS(0.007)S(0.993)DRDR 116.3 8.4992e-06 2024111000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SGYSS(ph)DRDR ddPTM_A549_PD325901_60min_R1 6 SGYSSDRDR 9 1 P17844-2;P17844;J3QRQ7;J3QR02;J3KRX8;X6RLV5;J3QS79;J3QKN9 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 SGYS(0.004)S(0.995)DRDR;SGYS(0.004)S(0.996)DRDR;S(0.001)GY(0.001)S(0.079)S(0.92)DRDR;S(0.001)GY(0.001)S(0.052)S(0.945)DRDR;S(0.215)GY(0.134)S(0.215)S(0.437)DRDR;SGYS(0.003)S(0.997)DRDR 106.2 1.0113e-05 4224844400.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SHTILLVQPTK ddPTM_A549_PD325901_60min_R1 1 SHTILLVQPTK 11 0 G3V279;P84090 G3V279 ERH Enhancer of rudimentary homolog 0 78.939 2.3650000000000005e-24 3239100.0 2613.1 3035.9 3168.9 3029.6 3214.0 3156.7 3602.5 3426.9 3351.4 3551.6 3562.6 False True 2878.379988337451 3291.7459474919765 3383.9606101437184 3216.7315112791853 2988.2597276980737 3130.9928818005496 3739.5951088636416 3358.547791148959 3210.5523128074396 3327.3513698801535 3124.4227851821083 0.9212517595212977 1.0535533037025 1.083067447271379 1.0295442494322025 0.9564197719560228 1.0021028193270132 1.1968915111613736 1.0749338428452166 1.0275665406211378 1.0649491437779979 1.0 11.609373971437641 -5.254014798861807 23.454565556129584 1.0316983785163383 0.9212516318434727 0.22448606872065013 0.06101369182499935 469.5393401722931 1483202.5525519834 0.008584063216529863 0.11867455075651617 5.571667627952063e-06 5.254014798861807 -0.11044674667286558 (ac)SKS(ph)ES(ph)PKEPEQLRK ddPTM_A549_PD325901_60min_R1 2 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.472)KS(0.714)ES(0.814)PKEPEQLRK;S(0.626)KS(0.687)ES(0.687)PKEPEQLRK 41.86 3.3954e-05 171296000.0 15177.1 16041.1 15401.9 15610.9 18139.3 17155.3 15421.3 16691.7 17526.9 17699.5 19200.5 True False 16717.868019209498 17392.939793245347 16447.165553148585 16575.149838073736 16865.258145187825 17015.592924621593 16008.166010359148 16358.770949114656 16790.305344436572 16581.950549384444 16838.960221997728 0.9928088075990559 1.0328986804377578 0.976732846702891 0.9843333329109383 1.0015617308220577 1.0104895254989152 0.9506623805338489 0.9714834368302758 0.9971105770831625 0.984737200561972 1.0 14.039515436666326 (ac)SKSES(ph)PKEPEQLR ddPTM_A549_MK2206_60min_R1 1 SKSESPKEPEQLR 13 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.063)KS(0.063)ES(0.875)PKEPEQLR 63.062 4.2358000000000004e-19 113070000.0 11874.0 16741.0 16085.0 12823.0 16832.0 9666.6 10432.0 7293.9 23243.0 27782.0 28748.0 True False 13878.04090857202 17593.0453934076 18366.09486833232 15964.635575646342 14356.03509721557 10689.513195830243 12327.359366004797 8327.832661631926 17978.49761144402 21506.026904563027 21609.07819556322 0.6422319722745722 0.8141506654837228 0.8499249575626622 0.7387929939058763 0.664352036088386 0.4946769639634612 0.5704713201757886 0.3853858358169947 0.8319881787060852 0.9952311111993036 1.0 14.399349910282066 -9.055582946008897 3.613788824634279 0.9331229119911593 0.65193171598442 0.506161604051226 0.1317464873173277 0.14956232630081215 4.091213508159672 0.027300089920791148 0.02717696346069511 8.79867049616575e-10 9.055582946008897 -0.28119119600673925 (ac)SKSES(ph)PKEPEQLRK ddPTM_A549_MK2206_60min_R1 1 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.175)KS(0.175)ES(0.649)PKEPEQLRK 40.602 8.268500000000001e-07 81909000.0 8041.2 12835.0 11845.0 9725.5 13460.0 7447.4 7598.4 4826.2 17087.0 22792.0 24723.0 True False 9398.357971535239 13488.246677282516 13524.799111930146 12108.247936594285 11480.051830354188 8235.478924815981 8978.930924717299 5510.328629617626 13216.82178233207 17643.271370268532 18583.596779911968 0.5057340665986921 0.7258146437971955 0.7277815630690957 0.6515556746088441 0.6177518790530157 0.4431585027564827 0.4831643212590105 0.2965157227030476 0.7112090269101652 0.949400246853188 1.0 14.181742136078913 -9.738044254600686 1.0600059026082724 0.9500936515815489 0.5721084504752856 0.5887441430337739 0.12898194741809832 0.24024059555084593 0.5549752930241468 0.04344491853695181 0.027995090569870484 1.8279139422510825e-10 9.738044254600686 -0.3779852011062633 (ac)SKSES(ph)PKEPEQLRK ddPTM_A549_PD325901_60min_R1 1 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.119)KS(0.131)ES(0.75)PKEPEQLRK 48.547 7.2341e-06 178870000.0 5082.6 4871.6 6828.1 7716.5 7285.8 13730.0 9185.5 10017.0 7964.3 7732.3 8593.7 True False 5598.581810387636 5282.1468288816895 7291.495926700854 8193.130679556982 6774.070542645493 13618.187432166997 9535.059228998463 9817.203076815524 7629.588167599301 7244.081258397426 7536.729379952698 0.7428397024947676 0.700853986204138 0.9674615551535987 1.0870936538268545 0.8988077189907021 1.8069094358609525 1.265145495917794 1.3025813429003787 1.0123208334763356 0.961170408700928 1.0 12.879722875663909 -5.925601799230031 2.304870324517344 1.1003566825258946 0.7093249551901133 0.30889655062574095 0.24284275859625656 0.33695848263878037 3.493274118583137 0.03644894624609732 0.1547884295998597 1.1868564676305173e-06 5.925601799230031 -0.3910317273357813 (ac)SLLDGLAS(ph)SPRAPLQSSK ddPTM_A549_PD325901_60min_R1 2 SLLDGLASSPRAPLQSSK 18 1 E9PI10;E9PK87;F8W6N5;Q3YBR2 E9PI10 TBRG1 Transforming growth factor beta regulator 1 1 S(0.325)LLDGLAS(0.337)S(0.337)PRAPLQSSK;S(0.002)LLDGLAS(0.499)S(0.499)PRAPLQS(0.001)SK 66.965 4.1141000000000005e-05 3825600.0 2257.0 2511.0 2837.5 2572.2 2623.6000000000004 2963.3999999999996 2955.7 3130.3 2976.3 2614.8 3255.7 True False 2486.1289784844166 2722.610782355265 3030.0698132736293 2731.078952109954 2439.3273869286445 2939.2670529121365 3068.1807809210986 3067.863710827154 2851.216461362051 2449.701081755439 2855.269539582717 0.8707160371443432 0.9535389722797102 1.061220235521603 0.9565047762562856 0.8543247329585353 1.029418418179075 1.0745678256944868 1.0744567783521786 0.9985804919064636 0.8579579082798083 1.0 11.479411228171127 (ac)SLLDGLASS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SLLDGLASSPR 11 0 E9PI10;E9PK87;F8W6N5;Q3YBR2 E9PI10 TBRG1 Transforming growth factor beta regulator 1 1 SLLDGLAS(0.2)S(0.8)PR;SLLDGLAS(0.357)S(0.643)PR 91.961 3.4573e-08 4133500.0 0.0 0.0 103.97 126.71 0.0 0.0 0.0 0.0 99.552 0.0 165.79 True False 0.0 0.0 111.02602942239977 134.53658892071078 0.0 0.0 0.0 0.0 95.36817564140546 0.0 145.39888102940043 0.0 0.0 0.7635961751311533 0.9252931519707278 0.0 0.0 0.0 0.0 0.6559072185852758 0.0 1.0 7.183872356284318 -9.042942721235667 2.437731333816881 0.8717974278045169 0.2270338131512278 0.0 0.41552309449876906 0.1994120025365708 2.4175300555266195 0.06812994175705529 0.06741279896582907 9.05852065150372e-10 9.042942721235667 -0.644763614653289 (ac)SLYPS(ph)LEDLKVDK ddPTM_A549_MK2206_60min_R1 1 SLYPSLEDLKVDK 13 1 B4DHN5;E9PBU7;O00560-2;O00560 B4DHN5 SDCBP Syntenin-1 1 S(0.247)LY(0.216)PS(0.537)LEDLKVDK 48.14 0.0059103 1808500.0 1058.0 1102.0 838.41 1035.5 1569.2 1187.9 1300.5 1341.6 1406.4 1476.8 1783.1 True False 1236.5645343834603 1158.0870929774312 957.309145076686 1289.1975464853617 1338.37275870667 1313.6027895357975 1536.7840160553328 1531.7759084776842 1087.8526455593026 1143.189854317856 1340.3070589435367 0.9225979421149593 0.8640461043980953 0.7142461413515653 0.9618673108396065 0.9985568230623277 0.9800760062930742 1.146591003756008 1.142854466263177 0.8116443454507917 0.852931309053126 1.0 10.388347838828222 -6.33858501654708 24.98890993068512 0.9565628345749749 0.8366693493046624 0.2523557146192894 0.10867303383526979 161.13056067429503 52192.249120564826 0.017666689458340264 0.04105368108029229 4.5857986640963054e-07 6.33858501654708 -0.11989348527031252 (ac)SLYPS(ph)LEDLKVDK ddPTM_A549_PD325901_60min_R1 2 SLYPSLEDLKVDK 13 1 B4DHN5;E9PBU7;O00560-2;O00560 B4DHN5 SDCBP Syntenin-1 1 S(0.089)LY(0.075)PS(0.837)LEDLKVDK;S(0.001)LY(0.001)PS(0.998)LEDLKVDK 78.486 7.3158e-06 11539000.0 4352.9 4570.8 4598.3 4959.4 5681.799999999999 4439.799999999999 4516.700000000001 5039.4 5123.8 5132.0 5529.200000000001 True False 4794.803203564386 4955.997357223994 4910.368289824189 5265.730874385391 5282.729969145897 4403.643740811 4688.585490133077 4938.885213667176 4908.464504494467 4807.964644167398 4849.143452486645 0.9887938458709872 1.022035624597279 1.0126259076345012 1.0859094860732814 1.0894150731789358 0.9081281640683999 0.9668894179092115 1.0185067243441748 1.0122333052402073 0.9915080243092971 1.0 12.243514218357111 (ac)SQPGQKPAAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SQPGQKPAASPR 12 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 S(0.032)QPGQKPAAS(0.968)PR 64.22399999999999 9.7254e-05 108810000.0 2441.5 2620.7 2332.0 2507.2 3277.5 2815.3 2128.6 2315.7 3178.4 3625.4 4184.3 True False 2853.5655110559724 2754.0824360852553 2662.712666021199 3121.464112552486 2795.384091677997 3113.213177355108 2515.3390669553123 2643.9575665338234 2458.497474861838 2806.419622050349 3145.222829194907 0.9072697439966151 0.8756398467291511 0.8465895138827993 0.992446094304707 0.8887713982393867 0.9898227713652987 0.7997331838008985 0.8406264707199159 0.7816608260760805 0.8922800623219175 1.0 11.618946515816399 -7.753718261828749 24.985599883054935 0.8825363697874954 0.9138665651365927 0.10374155757071701 0.06828163272975325 669.6282746744256 2166913.4158321703 0.014183257282146143 0.020818803360770497 1.763119457123951e-08 7.753718261828749 0.03133019534909731 (ac)SQPGQKPAAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SQPGQKPAASPR 12 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 SQPGQKPAAS(1)PR;S(0.019)QPGQKPAAS(0.981)PR 73.03699999999999 5.839299999999999e-06 328110000.0 12478.4 10956.3 11676.9 10957.9 12873.599999999999 13085.400000000001 10760.3 12433.5 15273.900000000001 13672.900000000001 14361.1 True False 13745.197981887437 11879.625852138186 12469.364652903907 11634.744595803462 11969.402747508986 12978.836840850543 11169.789104762092 12185.504088607946 14631.991099418028 12809.59076056829 12594.77574251355 1.0913412245595329 0.9432185292540476 0.9900426103510268 0.9237754473492124 0.9503466351613056 1.0304936829514637 0.8868589114340935 0.9675046493663153 1.1617508241951364 1.0170558827283946 1.0 13.620537813805491 -8.724701662132725 24.757601511512643 1.0763823348824422 0.9691826266957598 0.25264576411017947 0.06440590920095032 135.89132610157094 91577.23859356418 0.01237469228302696 0.014031382012291158 1.8849435036252474e-09 8.724701662132725 -0.10719970818668234 (ac)SQPGQKPAAS(ph)PRPR ddPTM_A549_MK2206_60min_R1 7 SQPGQKPAASPRPR 14 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;S(0.006)QPGQKPAAS(0.994)PRPR 81.594 1.4982e-06 13529036200.0 11339.460000000001 13948.559999999998 13600.879999999997 11712.51 14969.199999999999 10814.050000000001 11572.939999999999 10039.439999999999 16423.27 17288.29 18535.72 True False 13253.283624820293 14658.482124883181 15529.689298899815 14582.07547579456 12767.250509579328 11958.38559321458 13675.593395438229 11462.561364495541 12703.425567573044 13382.853281761132 13932.789164152822 0.9512297551246376 1.05208526104719 1.1146145338117655 1.0466013160747643 0.9163456332510745 0.8582908599508479 0.9815402525880229 0.8227039991380303 0.9117647168778837 0.9605293759984109 1.0 13.766196475284518 -6.7538843391504235 24.624957343831156 0.9386719655554138 1.0471637764198067 0.4547640789163352 0.06104112116419892 120.3371244894753 392223.33163521247 0.009582817658572504 0.019644957702821028 1.7624453565091598e-07 6.7538843391504235 0.10849181086439297 (ac)SQPGQKPAAS(ph)PRPR ddPTM_A549_PD325901_60min_R1 9 SQPGQKPAASPRPR 14 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;S(0.001)QPGQKPAAS(0.999)PRPR;SQPGQKPAAS(1)PRPR;S(0.004)QPGQKPAAS(0.996)PRPR 106.14 2.7761e-19 18118842100.0 18197.960000000003 18273.55 20090.449999999997 18456.030000000002 24548.010000000002 20702.61 20401.47 22398.29 22150.84 21112.55 24267.809999999998 True False 20045.40350256991 19813.526189529297 21453.908750690116 19596.0170564147 22823.842463637073 20534.01480808847 21177.859104962747 21951.53853483141 21219.917226421065 19779.499989909684 21283.023216322406 0.9418494402241059 0.9309544977770771 1.0080291945665245 0.9207346558446685 1.0723966342400537 0.9648072362360857 0.9950587794651745 1.0314107310655143 0.9970349142008668 0.9293557493627297 1.0 14.377415477259033 -5.8809945007877795 1.0076883909406562 1.0011522207152783 0.9271851000061431 0.15260716471219482 0.04212910164288549 0.7702431593512182 1.0643074195612032 0.004864606216977411 0.04839063170943099 1.315241486205962e-06 5.8809945007877795 -0.07396712070913525 (ac)SQSGAVSCCPGATNGS(ph)LGR ddPTM_A549_MK2206_60min_R1 2 SQSGAVSCCPGATNGSLGR 19 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;E9PN68;E9PLN2;E9PNT0;E9PLH1;E9PNY4;E9PM34 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 SQSGAVSCCPGAT(0.001)NGS(0.999)LGR;SQSGAVSCCPGAT(0.01)NGS(0.99)LGR 170.16 1.1765999999999996e-126 10961600.0 1700.35 1322.1 1340.13 1349.07 2192.7 1568.4099999999999 1161.06 1405.87 2166.3 1849.2199999999998 2469.31 True False 1987.3275104337592 1389.38924285432 1530.1805853837855 1679.5922105620537 1870.1567346521251 1734.378105173702 1372.0095729959285 1605.1563777963052 1675.6365088702491 1431.4799176609324 1856.1121775109993 1.0706936436884522 0.7485480994567132 0.8244009192567875 0.9048980071960658 1.0075666531965537 0.9344144853892722 0.739184619129949 0.8647949177020002 0.9027668312144993 0.7712248941658859 1.0 10.858068189657871 -10.16343916496721 0.8427797508202822 0.9938996362728566 0.8833063752502355 0.0 0.11493486404384652 0.7497477601028901 1.048684109836717 0.04426998772146763 0.018240411958759715 6.863740174673882e-11 10.16343916496721 -0.11059326102262113 (ac)SQSGAVSCCPGATNGS(ph)LGR ddPTM_A549_PD325901_60min_R1 2 SQSGAVSCCPGATNGSLGR 19 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;E9PN68;E9PLN2;E9PNT0;E9PLH1;E9PNY4;E9PM34 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 SQSGAVSCCPGAT(0.001)NGS(0.999)LGR;SQSGAVSCCPGAT(0.012)NGS(0.988)LGR 135.08 3.1921999999999996e-86 15364800.0 1198.2 904.6800000000001 939.35 1490.88 1187.26 1186.29 1268.32 896.96 1300.85 1359.3899999999999 2180.1400000000003 True False 1319.8403819317803 980.9205585747366 1003.0999397704263 1582.968271565853 1103.8709534246466 1176.6292475531955 1316.5866116513353 879.0694291484924 1246.179798327731 1273.5578834050518 1911.9966010461244 0.6902943139175282 0.5130346769644039 0.5246347923534974 0.8279137477021414 0.577339391095506 0.6153929598564233 0.6885925481933293 0.4597651631114411 0.6517688355962034 0.6660879432046275 1.0 10.900864243305927 -10.391212557706128 0.710332720424053 1.0081285042845158 0.6117037438606717 0.1261541820991553 0.1364258680151091 0.3200438020249793 0.28803175020365696 0.06963057197917186 0.01968354307993539 4.0624445138276195e-11 10.391212557706128 -0.3964247604238441 (ac)SRPSSVS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SRPSSVSPR 9 1 Q9H6S0;D6RF50;D6RA70 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 SRPS(0.004)S(0.017)VS(0.979)PR 70.399 9.8847e-06 18367000.0 477.59 578.6 542.37 397.46 313.99 170.54 188.04 128.38 163.95 679.6 749.64 True False 558.1955160455544 608.0482685995838 619.2862215565683 494.83771784265747 267.80248694003785 188.5864296047099 222.20443397081505 146.57825814726093 126.81558677435132 526.0778879973014 563.4836989885214 0.9906151980040249 1.0790875932898465 1.0990312988081377 0.878175746221077 0.4752621724829935 0.33467947687436395 0.39434048290958906 0.26012865751107883 0.22505635389629017 0.933616871156406 1.0 9.13823006507269 -6.598851113731763 3.8268900034376108 0.5471984721474119 1.0519556890460617 0.505162826379346 0.23808641947092574 0.2002463377905563 5.780723891979981 0.04581994422081598 0.10066334559094892 2.5185401940415223e-07 6.598851113731763 0.5047572168986498 (ac)SRPSSVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SRPSSVSPR 9 1 Q9H6S0;D6RF50;D6RA70 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 S(0.003)RPS(0.008)S(0.027)VS(0.962)PR;SRPS(0.003)S(0.003)VS(0.994)PR 87.149 3.4776999999999998e-06 47567000.0 1456.93 1370.62 1700.17 1384.57 1875.27 1082.13 1034.79 1234.4299999999998 1631.5 1731.87 1734.9499999999998 True False 1604.8364610648207 1486.126957591309 1815.5537601527496 1470.0917443133808 1743.5575045302942 1073.3174920590577 1074.1694997088148 1209.808325258399 1562.93372869408 1622.5194326372164 1521.5621487541953 1.0547294846804698 0.976711308708685 1.1932169590570223 0.9661726571714755 1.1458996308220872 0.7054049635355707 0.7059649194009652 0.7951093724623408 1.0271902005276343 1.0663510747593725 1.0 10.571337547116842 (ac)SS(ph)PAST(ph)PSRR ddPTM_A549_PD325901_60min_R1 2 SSPASTPSRR 10 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53;A0A3B3IS88 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 2 S(0.458)S(0.542)PAS(0.166)T(0.756)PS(0.078)RR;S(0.438)S(0.562)PAS(0.218)T(0.717)PS(0.065)RR 58.273999999999994 0.00027714 9041100.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SS(ph)SPLSKK ddPTM_A549_MK2206_60min_R1 2 SSSPLSKK 8 1 P22314;Q5JRR9 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 S(0.026)S(0.583)S(0.384)PLS(0.007)KK;S(0.255)S(0.436)S(0.304)PLS(0.005)KK 55.567 0.019232 290480000.0 11571.8 13198.5 13046.0 11289.400000000001 14609.7 10036.0 11676.8 9733.5 16490.7 16910.0 17780.6 True False 13524.83693665266 13870.247274648475 14896.118971231786 14055.303506800421 12460.632483352569 11098.002858642363 13798.323413052609 11113.253432593578 12755.58278023664 13090.019255494948 13365.186300404599 1.011945260818641 1.0377892954794492 1.1145463023422908 1.0516354348442514 0.9323201490259326 0.8303664916594838 1.0324078619566193 0.8315075587279431 0.9543887001298662 0.9794116566185598 1.0 13.706192327328463 -6.74976258240718 22.921383986120613 0.9567900936139878 1.057148999111165 0.4095083502868756 0.06475344252629707 72.66093747037283 142629.0603413369 0.009429001613948176 0.019471470992264272 1.779251815300862e-07 6.74976258240718 0.1003589054971773 (ac)SS(ph)SPLSKK ddPTM_A549_PD325901_60min_R1 1 SSSPLSKK 8 1 P22314;Q5JRR9 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 S(0.248)S(0.368)S(0.368)PLS(0.016)KK 44.318000000000005 0.036836 278600000.0 13201.0 13341.0 13734.0 12014.0 14451.0 13970.0 14500.0 14516.0 14102.0 15024.0 15107.0 True False 14541.155801937426 14465.292890243576 14666.071829251112 12756.077494226345 13436.011613243572 13856.232951738737 15051.80543470446 14226.466992418302 13509.34198102599 14075.382075988116 13248.934771163229 1.0975339567364133 1.0918079936303855 1.1069623394306636 0.962800233720706 1.0141201421330508 1.0458375100387176 1.1360766502877833 1.0737819483708764 1.0196549544820424 1.0623783963842648 1.0 13.693588749629907 (ac)SS(ph)SPVK ddPTM_A549_PD325901_60min_R1 2 SSSPVK 6 0 P46821;P37837;F2Z393;E9PM01;E9PKI8 P46821;P37837 MAP1B;TALDO1 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1;Transaldolase 1 S(0.021)S(0.49)S(0.49)PVK;S(0.021)S(0.49)S(0.49)PVK 44.446999999999996 0.048082 111163000.0 3423.2 3551.7 2491.6000000000004 2866.1 2905.2 2721.0 2528.2 3083.4 2948.0 3006.8 3809.2 True False 3770.720743973354 3851.0142236922325 2660.6949592079563 3043.132487614626 2701.1487743959046 2698.8410781446746 2624.4120344841253 3021.8991681194925 2824.1058119461527 2816.950134856303 3340.6925485083034 1.128724265768506 1.1527592461065594 0.7964501134341196 0.910928630344464 0.8085595232647285 0.8078687394773187 0.7855892143250315 0.9045726669665667 0.8453653758730899 0.843223401720741 1.0 11.705931498956456 -5.7494523425974675 24.995754207900017 0.8912667040574046 1.1407419230923292 0.7042131643239987 0.06812031829547877 120.5512031046297 251372.44919925364 0.011667208208082803 0.04448354024819436 1.7805232842563292e-06 5.7494523425974675 0.24947521903492464 (ac)SS(ph)SPVNVKK ddPTM_A549_MK2206_60min_R1 3 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.211)S(0.432)S(0.358)PVNVKK;S(0.127)S(0.436)S(0.436)PVNVKK;S(0.158)S(0.499)S(0.342)PVNVKK 78.49600000000001 0.0028138 6336665000.0 40201.9 41618.9 38945.7 36141.2 49821.9 37711.1 36531.0 34961.7 55820.5 57212.7 60961.3 True False 46986.99787791154 43737.12424130527 44468.78588210197 44995.795622440135 42493.164508671856 41701.66357139775 43168.209835076836 39917.628040715754 43177.245877021516 44288.311334054175 45822.92676371187 1.0254036831868523 0.9544812461857327 0.9704483982746761 0.981949403940589 0.9273341427488887 0.9100611095060425 0.9420657492629354 0.8711278580382464 0.9422629440425546 0.9665098775211148 1.0 15.483781987747786 -4.202869758814048 13.463262340958178 0.959806088685756 0.9571362534617456 0.0 0.041132574120357326 0.0 0.0 0.005894709285033764 0.0 6.268018089698168e-05 4.202869758814048 -0.0026698352240104306 (ac)SS(ph)SPVNVKK ddPTM_A549_PD325901_60min_R1 6 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.301)S(0.45)S(0.249)PVNVKK;S(0.293)S(0.387)S(0.32)PVNVKK;S(0.158)S(0.499)S(0.342)PVNVKK;S(0.211)S(0.432)S(0.358)PVNVKK;S(0.185)S(0.481)S(0.334)PVNVKK;S(0.155)S(0.422)S(0.422)PVNVKK 80.23899999999999 0.0016675999999999998 11196591000.0 70284.4 78565.4 75042.1 86336.7 85477.0 85032.9 81864.6 88776.8 91354.7 86556.1 91079.0 True False 77419.62054735942 85186.38198329533 80134.90817080556 91669.52187412773 79473.39039964155 84340.4202549681 84980.002151028 87006.07707994769 87515.37965352673 81090.93307424356 79876.86039735057 0.9692371503115231 1.0664713354973185 1.0032305698067165 1.1476355156939584 0.9949488500711978 1.0558805120207952 1.0638876106082746 1.0892525901385277 1.0956286866832028 1.015199303914219 1.0 16.2854900075468 (ac)SSAPRS(ph)PTPR ddPTM_A549_MK2206_60min_R1 1 SSAPRSPTPR 10 1 Q9HBI1 Q9HBI1 PARVB Beta-parvin 1 S(0.101)S(0.101)APRS(0.725)PT(0.072)PR 42.336000000000006 0.00025079 21292000.0 0.0 127.83 141.22 117.42 0.0 0.0 0.0 145.32 135.04 190.47 318.49 True False 0.0 134.3360009939247 161.24711950922534 146.18790527118412 0.0 0.0 0.0 165.9195550238351 104.4536556145679 147.4426947128399 239.40014312317132 0.0 0.5611358424493876 0.6735464624441087 0.6106425140939472 0.0 0.0 0.0 0.6930637252730025 0.4363140900915273 0.615883903782717 1.0 7.903280204558344 -10.207643654273788 0.5965786524528227 1.0204595324510386 0.3134564361924871 0.27180815901497346 0.2906002535470334 0.6476823772665036 0.4203266668715285 0.2253547405271847 0.06662827217085127 6.199495451866526e-11 10.207643654273788 -0.7070030962585515 (ac)SSAPRS(ph)PTPR ddPTM_A549_PD325901_60min_R1 2 SSAPRSPTPR 10 1 Q9HBI1 Q9HBI1 PARVB Beta-parvin 1 S(0.046)S(0.046)APRS(0.622)PT(0.286)PR;S(0.032)S(0.033)APRS(0.755)PT(0.18)PR 56.403999999999996 1.2730999999999999e-05 57118000.0 487.94 653.86 395.11 240.6 389.73 175.8 364.61 155.87 106.88 125.84 517.53 True False 537.475309597557 708.9630769218699 421.92454058944264 255.461315557754 362.35670929551026 174.36834308630426 378.48543307224753 152.76105057235046 102.3882052852119 117.89444092401125 453.87709089297033 1.1841869095884818 1.5620155569584626 0.9296008744555418 0.5628424978558675 0.7983586670624853 0.38417524608533815 0.8338941106888758 0.33656920262664974 0.22558575292656985 0.2597497060097536 1.0 8.826157860933991 -5.978656778096745 3.740268794132987 0.6116978760046707 1.368802096439459 0.6029915389257667 0.255196221105024 0.13769593130037563 4.194893181233798 0.04260654627836717 0.1400910007339843 1.050372207397595e-06 5.978656778096745 0.7571042204347882 (ac)SSAPRS(ph)PTPRPR ddPTM_A549_MK2206_60min_R1 3 SSAPRSPTPRPR 12 2 Q9HBI1 Q9HBI1 PARVB Beta-parvin 1 S(0.001)S(0.001)APRS(0.975)PT(0.022)PRPR;SSAPRS(0.863)PT(0.137)PRPR;S(0.002)S(0.011)APRS(0.804)PT(0.183)PRPR 67.234 4.0961e-05 192305000.0 536.91 280.9 482.74 457.87 822.46 620.2 548.7460000000001 645.15 825.29 1013.16 1271.81 True False 627.5272818107973 295.19661017909283 551.1997909069784 570.0481705545651 701.4772235061741 685.829152344559 648.4460451167245 736.6019881890123 638.3631327173185 784.2864523298203 955.9844768296667 0.6564199492986197 0.30878807902619293 0.576578181201146 0.5962943796378546 0.7337747008533909 0.7174061597934892 0.6783018561840747 0.7705166831074569 0.6677547054261002 0.8203966396303328 1.0 9.900843381848235 -14.999999999990518 0.08658915375073016 2.2261443345008662 0.2872132674447101 0.564229532441646 0.10729724065461908 55.95675105119894 0.35520881166323165 12.945820477548066 1.118123242158835 1.0000000000218336e-15 14.999999999990518 -1.9389310670561561 (ac)SSAPRS(ph)PTPRPR ddPTM_A549_PD325901_60min_R1 4 SSAPRSPTPRPR 12 2 Q9HBI1 Q9HBI1 PARVB Beta-parvin 1 S(0.001)S(0.002)APRS(0.876)PT(0.121)PRPR;S(0.268)S(0.268)APRS(0.386)PT(0.078)PRPR;S(0.002)S(0.001)APRS(0.918)PT(0.079)PRPR;S(0.047)S(0.047)APRS(0.787)PT(0.119)PRPR 77.77600000000001 9.1369e-06 274047000.0 1159.0100000000002 1332.94 1038.79 1269.06 1397.71 1073.98 1245.82 1186.8400000000001 1446.4499999999998 1051.59 1541.2700000000002 True False 1276.6718419819335 1445.2715317533375 1109.2885361517228 1347.4469539556244 1299.539671437733 1065.2338629569335 1293.2303618388623 1163.1675451420317 1385.6607366653702 985.1924279345275 1351.7035609155193 0.9444909955828139 1.0692222566717542 0.8206596240675678 0.9968509316073623 0.9614087800120499 0.7880676605123703 0.9567411074680807 0.8605197017859517 1.025121762442389 0.7288524321614193 1.0 10.400563076748542 -8.786209709658944 24.996935266807803 1.0118630687228658 0.9262277732759171 0.0 0.11397740023116094 246.11772472177978 248368.0659320167 0.0124806881881151 0.013289404252190157 1.6360263355348536e-09 8.786209709658944 -0.0856352954469487 (ac)SSAPTT(ph)PPSVDKVDGFSR ddPTM_A549_MK2206_60min_R1 1 SSAPTTPPSVDKVDGFSR 18 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.192)S(0.192)APT(0.192)T(0.381)PPS(0.044)VDKVDGFSR 42.647 0.01999 7799200.0 1075.5 1033.4 1187.8 916.4 1817.3 1438.2 1212.3 1171.3 1931.7 1207.4 1771.5 True False 1257.0181065495387 1085.9956459917212 1356.2479008147425 1140.9180411387597 1549.9775773627523 1590.389369400105 1432.5592177346257 1337.3353619558088 1494.1730342910305 934.6475014242817 1331.587659087249 0.9439995166455472 0.8155645169737669 1.0185194279619543 0.8568103146290903 1.1640071660210496 1.194355744097429 1.0758279471563958 1.004316428459918 1.1220988900687374 0.7019045986540201 1.0 10.378931689679058 -6.753169893162861 24.9995079621208 1.072842347532795 0.9099117939021466 0.14471144835435235 0.13409192582627613 123.16014795957732 372322.7410511534 0.011466453776909488 0.02355589470453212 1.7653470933459926e-07 6.753169893162861 -0.16293055363064846 (ac)SSAPTT(ph)PPSVDKVDGFSR ddPTM_A549_PD325901_60min_R1 2 SSAPTTPPSVDKVDGFSR 18 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.212)S(0.212)APT(0.015)T(0.547)PPS(0.014)VDKVDGFSR;S(0.265)S(0.265)APT(0.005)T(0.465)PPSVDKVDGFSR 105.31 4.6058e-23 24595000.0 5789.6 5896.1 6014.2 5480.6 6662.1 6343.2 6603.1 6352.7 5909.2 6646.9 7594.299999999999 True False 6377.355929921743 6392.98503936475 6422.3597783225605 5819.124214654312 6194.177078997303 6291.543082281254 6854.3845838549605 6225.990414903259 5660.856873796542 6227.213599632949 6660.249244234119 0.9575251159620969 0.9598717412714332 0.9642821976793882 0.8737096768100711 0.9300218132766875 0.9446407861879854 1.0291483595435873 0.9347984116800426 0.8499467011234201 0.9349820661777701 1.0 12.701360452452944 -11.260791127979841 1.7759329347767812 1.0001078144371016 0.9250121923575857 0.0 0.0497664699362466 0.4771920976096052 2.716250812535783 0.04071903139512617 0.008233850263268411 5.4854071973546725e-12 11.260791127979841 -0.07509562207951592 (ac)SSDASQGVITT(ph)PPPPSMPHK ddPTM_A549_MK2206_60min_R1 1 SSDASQGVITTPPPPSMPHK 20 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 S(0.079)S(0.079)DAS(0.06)QGVIT(0.146)T(0.632)PPPPS(0.003)MPHK 47.20399999999999 1.3994e-14 3657500.0 981.89 1076.4 1039.9 666.03 1189.4 1335.2 995.44 1075.9 1276.0 1224.0 1307.6 True False 1147.6090270943064 1131.184162323872 1187.3734568591092 829.207379899223 1014.4408355886527 1476.4899777659716 1176.2985628159329 1228.412119805562 986.9880373532925 947.4975498950805 982.8868320759169 1.1675901941533657 1.1508793539686986 1.2080469674736654 0.8436448152915901 1.0321033942901563 1.5021973329803746 1.1967792470385614 1.2498001598119701 1.0041726118852499 0.9639945505159612 1.0 9.940881506440649 -8.782873629202308 23.476084714618594 1.0019703239489206 1.166225828191371 0.22073310512064215 0.14962974315874125 142.81873952602896 156422.75768422917 0.02670723225205894 0.02844918726419422 1.6486420427997237e-09 8.782873629202308 0.1642555042424505 (ac)SSEPPPPPQPPTHQASVGLLDT(ph)PRSR ddPTM_A549_MK2206_60min_R1 1 SSEPPPPPQPPTHQASVGLLDTPRSR 26 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 SSEPPPPPQPPT(0.005)HQAS(0.013)VGLLDT(0.612)PRS(0.37)R 63.776 4.2431e-09 19630000.0 854.75 1117.3 1014.1 903.69 1159.0 673.75 1130.1 996.29 1345.8 1469.5 1858.6 True False 999.0109033688683 1174.1657976258466 1157.914628907417 1125.0940905681857 988.5126353180162 745.0457778009458 1335.4245417486602 1137.5171585101614 1040.9784488009882 1137.5389293879257 1397.0583252495403 0.7150817437707381 0.8404558180605087 0.8288233984079313 0.8053307941651063 0.7075671913278565 0.5332961153700343 0.9558831708118763 0.8142230986003965 0.7451216817415625 0.8142386819710912 1.0 10.44817653718596 -10.85216028571309 0.6747515681858086 1.0335512601822732 0.7695558194762434 0.09164139860258824 0.11384572582926701 0.8337256386162887 0.5300121244159149 0.1323824995691608 0.019954239627781898 1.4055286878198724e-11 10.85216028571309 -0.26399544070602976 (ac)SSILPFT(ph)PPVVK ddPTM_A549_MK2206_60min_R1 2 SSILPFTPPVVK 12 0 K7EJX0;B7Z5N5;Q15796-2;Q15796;K7ESI8;K7EL92;K7ERC7 K7EJX0 SMAD2 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2 1 S(0.032)S(0.032)ILPFT(0.936)PPVVK;S(0.018)S(0.018)ILPFT(0.963)PPVVK 93.62299999999999 8.3827e-08 78888000.0 17947.3 19469.9 15890.5 15777.9 26345.0 19381.300000000003 18107.8 20650.1 28632.0 26970.0 28604.0 True False 20976.36547064298 20460.834747333298 18144.011843657736 19643.486208296847 22469.685399010472 21432.216301734294 21397.75286884026 23577.314913278948 22146.89771590867 20877.458268521506 21500.83736976103 0.9756069082288082 0.9516296689034819 0.8438746608620759 0.9136149383615925 1.045060944026861 0.9968084467201614 0.9952055587813641 1.0965765894512691 1.0300481481273036 0.9710067524106643 1.0 14.392105227535192 -6.7541718226341505 24.999475608474317 1.0198156138063659 0.9178344668033049 0.5435962664648468 0.0431823406430477 92.40346699447124 317853.4047263041 0.005906628535023098 0.012096506090243021 1.7612790827217817e-07 6.7541718226341505 -0.10198114700306093 (ac)SSILPFT(ph)PPVVK ddPTM_A549_PD325901_60min_R1 1 SSILPFTPPVVK 12 0 K7EJX0;B7Z5N5;Q15796-2;Q15796;K7ESI8;K7EL92;K7ERC7 K7EJX0 SMAD2 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2 1 S(0.027)S(0.027)ILPFT(0.946)PPVVK 80.318 0.00018381 57240000.0 6854.6 7758.8 8007.2 8563.1 9664.1 11671.0 8313.3 7592.3 11608.0 7624.0 8114.1 True False 7550.47394591018 8412.661305510965 8550.616743205152 9092.023238788877 8985.326955335076 11575.955245507717 8629.667180712315 7440.865620455871 11120.156127907369 7142.619338880017 7116.117139517808 1.0610384564891808 1.1821982607331014 1.2015845967067016 1.2776663256845935 1.262672715916524 1.6267235373660685 1.212693244296013 1.0456356288929876 1.5626718770766155 1.0037242500148058 1.0 12.796874543891455 -5.457685227925755 1.2876418523562425 1.277119037991059 1.0188531560748446 0.05748182700440141 0.1943074112673982 2.1939244668077276 3.9611612480424214 0.03299288087752363 0.6737964443319344 3.4858987777583076e-06 5.457685227925755 -0.25826588191621447 (ac)SSILPFT(ph)PPVVKR ddPTM_A549_MK2206_60min_R1 1 SSILPFTPPVVKR 13 1 K7EJX0;B7Z5N5;Q15796-2;Q15796;K7ESI8;K7EL92;K7ERC7 K7EJX0 SMAD2 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2 1 S(0.281)S(0.281)ILPFT(0.439)PPVVKR 81.918 1.1006000000000001e-14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SSILPFT(ph)PPVVKR ddPTM_A549_PD325901_60min_R1 1 SSILPFTPPVVKR 13 1 K7EJX0;B7Z5N5;Q15796-2;Q15796;K7ESI8;K7EL92;K7ERC7 K7EJX0 SMAD2 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2 1 S(0.325)S(0.325)ILPFT(0.35)PPVVKR 91.914 2.1154e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SSNCTSTTAVAVAPLS(ph)ASK ddPTM_A549_MK2206_60min_R1 1 SSNCTSTTAVAVAPLSASK 19 0 P78356-2;P78356 P78356-2 PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 beta 1 SSNCTSTTAVAVAPLS(0.968)AS(0.032)K 96.48700000000001 1.8682999999999998e-17 3597100.0 1210.4 1230.9 1275.6 1067.9 1425.1 1347.4 945.96 1041.1 1816.0 1408.9 1844.2 True False 1414.6859285611904 1293.547552401017 1456.499261053447 1329.535547939853 1215.469677818555 1489.980973668267 1117.8286872954275 1188.6791132350309 1404.678899556096 1090.6285114764542 1386.234242669323 1.0205244431396248 0.9331377862302482 1.0506876949229174 0.9590987634093561 0.876814062447379 1.0748406927238863 0.8063779214852926 0.857487917010417 1.01330558452463 0.7867562911852094 1.0 10.43695534602146 (ac)SSNCTSTTAVAVAPLS(ph)ASK ddPTM_A549_PD325901_60min_R1 1 SSNCTSTTAVAVAPLSASK 19 0 P78356-2;P78356 P78356-2 PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 beta 1 SSNCTSTTAVAVAPLS(0.971)AS(0.029)K 67.168 7.4212e-10 7172500.0 2557.9 2523.2 2611.0 2957.3 2955.2 2809.7 2674.4 3233.9 2471.7 3083.3 3130.0 True False 2817.5761249735447 2735.8389191711685 2788.198161218485 3139.9657044843975 2747.636946886541 2786.8187347530657 2776.175755487834 3169.3973275545295 2367.8230445682852 2888.619911800731 2745.029842704765 1.0264282308119819 0.9966517946761043 1.0157259924253446 1.1438730667461485 1.0009497544038382 1.0152234745860267 1.0113462929613837 1.1545948529403314 0.8625855383179346 1.0523091104009574 1.0 11.422606118296255 -8.774819099187834 24.999980484175143 0.9351098454034724 1.0426050376843239 0.13014346706864166 0.06912508462690678 190.6790751016926 356282.124749341 0.011880235170264356 0.012681540663359733 1.679503451992179e-09 8.774819099187834 0.10749519228085147 (ac)SSS(ph)PLSK ddPTM_A549_MK2206_60min_R1 2 SSSPLSK 7 0 P22314;Q5JRR9 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 S(0.001)S(0.012)S(0.987)PLS(0.001)K;S(0.046)S(0.16)S(0.793)PLS(0.001)K 81.296 0.0040420000000000005 134940000.0 4521.1 5635.5 4514.0 4856.2 6089.9 4748.1 4351.7 4418.4 6942.200000000001 6749.4 6935.1 True False 5284.151149717449 5922.322878833313 5154.153076509299 6045.9692180031025 5194.083777241748 5250.540790466306 5142.347560682813 5044.721730782501 5369.802784415387 5224.705852338122 5212.923270977129 1.0136637113262112 1.136084797527283 0.9887260580267829 1.1598039916804348 0.9963860021036048 1.0072162043317638 0.9864613947634249 0.9677337395063751 1.0300943453957365 1.0022602637231575 1.0 12.347876909722531 (ac)SSS(ph)PLSK ddPTM_A549_PD325901_60min_R1 2 SSSPLSK 7 0 P22314;Q5JRR9 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 S(0.178)S(0.22)S(0.6)PLS(0.002)K;S(0.016)S(0.138)S(0.844)PLS(0.001)K 69.825 0.0073168999999999994 178761000.0 5667.9 5794.1 4130.200000000001 5148.4 5195.2 5311.4 5620.5 5357.1 6029.6 5368.2 6603.4 True False 6243.30103551255 6282.389141395723 4410.500208910217 5466.404975135248 4830.307074467026 5268.145719389055 5834.391203155611 5250.248437936352 5776.196880498816 5029.250935857259 5791.2236624014895 1.0780624958497276 1.0848120375980363 0.7615834694046824 0.9439119077069894 0.8340736528321213 0.9096774751753369 1.007453958484522 0.9065870606971503 0.997405249256693 0.8684262996970389 1.0 12.499652500779401 -8.784405781417005 21.93662116082157 0.998774769014201 0.9373333099397473 0.0 0.09852074376272742 110.1081546001341 105169.90201632527 0.015674530854840843 0.016696876687097156 1.642836028222351e-09 8.784405781417005 -0.06144145907445375 (ac)SSS(ph)PLSKK ddPTM_A549_PD325901_60min_R1 1 SSSPLSKK 8 1 P22314;Q5JRR9 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 S(0.016)S(0.17)S(0.813)PLS(0.001)KK 63.216 0.021006999999999998 292930000.0 12926.0 12476.0 11626.0 13024.0 14737.0 14782.0 13891.0 14559.0 15131.0 13640.0 16253.0 True False 14238.238004381732 13527.396304525804 12415.010272817346 13828.462900349914 13701.923959890017 14661.620292956486 14419.62960644687 14268.609323685445 14495.096689469881 12778.768072183038 14253.984036255777 0.9988953241540054 0.949025638734977 0.870985279711209 0.9701472139421844 0.961269770264821 1.0285980576141986 1.0116210015227858 1.00102604909564 1.01691545694178 0.8965050079808952 1.0 13.799077593284126 -6.999362738765855 2.4764572832356015 1.0090935527327591 0.941346366396654 0.12111242748757745 0.04529238182016834 0.17393003566479942 2.1410788610199427 0.004358070705389093 0.00862304937062255 1.0014684253002351e-07 6.999362738765855 -0.0677471863361051 (ac)SSS(ph)PVK ddPTM_A549_MK2206_60min_R1 1 SSSPVK 6 0 P46821;P37837;F2Z393;E9PM01;E9PKI8 P46821;P37837 MAP1B;TALDO1 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1;Transaldolase 1 S(0.005)S(0.121)S(0.873)PVK 44.446999999999996 0.048082 49235000.0 1308.4 1107.5 1027.3 831.57 1429.3 770.27 602.04 913.43 1400.1 1196.4 1237.4 True False 1529.2259326912285 1163.8670194850322 1172.9865873943295 1035.3046873305955 1219.0518633822603 851.779460136155 711.4228750680152 1042.9114997620543 1082.9795855002699 926.1324090641136 930.1194294973544 1.6441178242213874 1.2513092217781079 1.2611139496658217 1.1130879051629792 1.310640144396347 0.9157742899709824 0.7648726093728362 1.1212662231189534 1.1643446541972815 0.9957134317305947 1.0 9.86127216328702 -2.000000000004969 0.5854740350539254 1.0577109500474642 33.735270798107045 0.6383056444864186 0.13366949762104646 74.21609248792869 0.5509060172879122 0.024030111870720978 3099.897697540108 0.009999999999885587 2.000000000004969 32.67755984805958 (ac)SSS(ph)PVNVK ddPTM_A549_MK2206_60min_R1 2 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.237)S(0.237)S(0.526)PVNVK;S(0.205)S(0.09)S(0.705)PVNVK 74.26899999999999 5.9846e-10 1536790000.0 19564.5 20563.0 18545.7 16075.0 24547.4 18809.5 16978.1 16874.2 26988.8 26604.9 25450.3 True False 22866.509293899057 21609.568868325703 21175.759129600923 20013.375721634176 20936.509977744143 20799.908805264415 20062.801001913926 19266.16952507018 20875.879892257475 20594.834612094477 19130.28811745313 1.19530396790194 1.1295997601108085 1.106923168098114 1.0461617513943964 1.094416866552216 1.087276295974238 1.0487453653983412 1.0071029462171603 1.0912475423311472 1.0765564264191714 1.0 14.223570981539313 -2.0000000000000004 0.27194831717153717 1.0326602765862207 2.0941499070167024 0.6611969821596071 0.030757108465139793 22.66669678592503 0.2805938630510441 0.014110706263631857 11.511739245921923 0.00999999999999999 2.0000000000000004 1.0614896304304817 (ac)SSS(ph)PVNVK ddPTM_A549_PD325901_60min_R1 1 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.237)S(0.237)S(0.525)PVNVK 68.22399999999999 0.0021991 715580000.0 10610.0 9713.6 8819.8 9009.4 9702.0 9861.9 9740.6 10823.0 9794.8 10264.0 10554.0 True False 11687.119389330823 10532.199161882168 9418.364665765906 9565.89017616803 9020.564990082981 9781.587956102518 10111.28386326084 10607.12677452075 9383.15861833452 9615.929288334795 9255.924907318242 1.262663591845948 1.137887274080501 1.0175498137759555 1.0334883085108775 0.9745719720512024 1.0567920606582124 1.0924120457444835 1.145982371371031 1.0137461909307066 1.0388944794411539 1.0 13.176161444669392 -5.456401015164248 2.2294244901039817 1.0248865025918532 1.2796816878236836 0.6541862355550051 0.04704449315389291 0.19135399763037594 1.438537059596502 0.007256295826510364 0.08084303665144739 3.496221867591632e-06 5.456401015164248 0.2547951852318304 (ac)SSS(ph)PVNVKK ddPTM_A549_MK2206_60min_R1 1 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.017)S(0.054)S(0.928)PVNVKK 73.721 0.017282 11414000.0 3601.3 4394.4 4460.7 3804.7 5983.5 3991.4 3758.8 3894.8 5650.6 5836.7 6523.3 True False 4209.11139666839 4618.056190000021 5093.294335043208 4736.851670799473 5103.33507629452 4413.767298723109 4441.725305304721 4446.8998273247535 4370.748122154011 4518.1854162358 4903.384576078949 0.8584093968893333 0.9418099107561548 1.0387303414646956 0.9660371519517553 1.0407780579135124 0.9001470780520813 0.9058488552934594 0.9069041512711146 0.8913737142863741 0.9214421887847969 1.0 12.259562202362305 (ac)SSS(ph)PVNVKK ddPTM_A549_PD325901_60min_R1 1 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.083)S(0.263)S(0.653)PVNVKK 65.347 0.0062574 10848000.0 3147.0 3740.6 3811.9 3233.7 3803.9 4555.1 4166.8 4155.1 3717.5 3719.4 4199.1 True False 3466.4811233010464 4055.833489636843 4070.5984568168283 3433.43830473445 3536.727186742595 4518.004775838594 4325.369854160448 4072.2232708871093 3561.2664029544835 3484.556449243227 3682.6373202880472 0.941303968273994 1.1013393763466246 1.1053487223385972 0.9323313718185787 0.960378902168395 1.2268394584903641 1.1745305002834565 1.1057899317026934 0.9670423919659646 0.9462122240619321 1.0 11.846523606964594 -8.768283149262007 24.983909833102935 0.9844366808006084 1.0714785017888078 0.18479450994793323 0.08976192235899212 219.67495406634683 801944.7860585543 0.016040303287785423 0.01726132562450348 1.7049704280021936e-09 8.768283149262007 0.08704182098819935 (ac)SSSGT(ph)PDLPVLLTDLK ddPTM_A549_MK2206_60min_R1 1 SSSGTPDLPVLLTDLK 16 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 S(0.213)S(0.213)S(0.213)GT(0.362)PDLPVLLTDLK 123.38 2.936e-47 59303000.0 14215.0 15358.0 12830.0 12444.0 18300.0 14535.0 14187.0 13565.0 19576.0 19516.0 19766.0 True False 16614.144476617104 16139.656600678209 14649.486923264141 15492.780558632388 15608.094241863422 16073.08405244787 16764.594260497513 15487.880291070209 15142.067256448312 15107.32204554934 14857.556686152173 1.1182285773879725 1.0862927829661928 0.9859956944951817 1.0427542620835004 1.0505155438115057 1.0818120631791779 1.1283547230967508 1.042424445568868 1.0191492165438827 1.016810661717344 1.0 13.858909264834173 -8.686934012310157 3.2404588867217554 1.0085613427421936 1.0674001333191496 0.3254639381434564 0.0365945889165139 0.21539708077172354 4.509693369709917 0.006726018017459281 0.007507133995647012 2.05620299640294e-09 8.686934012310157 0.05883879057695607 (ac)SSSGTPDLPVLLTDLK ddPTM_A549_MK2206_60min_R1 1 SSSGTPDLPVLLTDLK 16 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 74.76 1.0671e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)SSSPVKR ddPTM_A549_MK2206_60min_R1 1 SSSPVKR 7 1 P37837;F2Z393;E9PM01;E9PKI8 P37837 TALDO1 Transaldolase 0 59.205 0.0078385 11865000.0 3508.1 4074.9 3328.4 2978.5 4297.2 3598.3 2740.5 2980.4 4389.8 5018.2 4748.6 False True 4100.18151518962 4282.295004694858 3800.417168775708 3708.232633709946 3665.0875724664206 3979.0697176417725 3238.4133763934196 3402.8808270921995 3395.517309070129 3884.5851347087387 3569.3915653072063 1.1487060021773572 1.199726879593916 1.0647240851113005 1.0388976849029983 1.0268101735010902 1.1147753461168126 0.9072732192985669 0.9533503861460838 0.951287424465544 1.088304564975461 1.0 11.801462459610311 -6.087305004567032 0.6242719242767186 0.973462754963302 1.2196597154454902 0.4942827937637485 0.06078674413761008 0.6950697805228678 0.3207836214711505 0.009103493004706288 0.1004438672603661 8.178901829535702e-07 6.087305004567032 0.2461969604821882 (ac)SSSPVKR ddPTM_A549_PD325901_60min_R1 3 SSSPVKR 7 1 P37837;F2Z393;E9PM01;E9PKI8 P37837 TALDO1 Transaldolase 0 ;; 75.311 0.00062861 45423000.0 12429.4 11974.5 11515.099999999999 12316.0 13897.900000000001 13266.3 12860.7 14353.099999999999 13722.7 15050.8 15981.099999999999 False True 13691.223537959331 12983.6331395114 12296.583931921467 13076.731348334577 12921.759449152158 13158.263651227748 13350.120976145072 14066.816160710867 13145.982640974711 14100.48991941441 14015.526012539658 0.9768611984815858 0.9263750163850414 0.8773544368523695 0.9330175218992749 0.9219603629283046 0.9388348064464423 0.952523720065929 1.003659523597282 0.9379585631829324 1.006062127586131 1.0 13.774738270294574 -7.791121952083523 2.417581386478702 0.9724912944093328 0.9251334064789838 0.4363129662752053 0.028967613828343647 0.2605175401634607 3.125415447720751 0.005032451685490202 0.007455566681035664 1.6176257363859018e-08 7.791121952083523 -0.04735788793034901 (ac)SSSPVNVKK ddPTM_A549_MK2206_60min_R1 2 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 62.2 0.0003859 18760700.0 14983.4 14128.7 14763.7 11363.599999999999 17149.4 13369.9 11861.2 11993.5 17099.0 16765.0 18250.6 False True 17512.23161104077 14847.790481443044 16857.41466009313 14147.682510131392 14626.74597767281 14784.693943778651 14016.22650614035 13693.615353553307 13226.103801492118 12977.774856201828 13718.472329064489 1.2765438593289047 1.082320984821753 1.2288113614792484 1.0312870245878298 1.0662080752740972 1.077721599689728 1.0217046162235592 0.9981880653388411 0.9641090847609015 0.9460072918401132 1.0 13.743832213393015 -5.266209710601502 0.38121543283069015 0.9796751192564257 1.4256662239803788 0.7344657520955482 0.05106934352885934 2.0041112137995443 0.19498363930050516 0.012358977573506378 0.40752954474084924 5.4173923408496305e-06 5.266209710601502 0.4459911047239531 (ac)SSSPVNVKK ddPTM_A549_PD325901_60min_R1 2 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 75.38 6.2318e-05 44426000.0 18688.9 18562.4 20014.5 20919.5 22304.4 22550.3 21056.8 23554.0 23032.4 24327.0 25210.7 False True 20586.18336995899 20126.718592748475 21372.804326965663 22211.650003368402 20737.815890002774 22366.657833328136 21858.128046723083 23084.196992244462 22064.42832532854 22790.989068328217 22109.943723794597 0.93108257656053 0.9103016653582983 0.9666602771116225 1.0046000243530402 0.9379406908071346 1.0116107988668133 0.9886107499766944 1.044064032031044 0.9979414059558608 1.0308026720032166 1.0 14.432407732631866 -5.893760100516295 0.7238863999718247 1.0019285068896855 0.89842270608837 0.5926059035595289 0.02589847409598678 0.7200204479328944 0.42695283504291714 0.003819411020912891 0.05068110490216829 1.2771440943146222e-06 5.893760100516295 -0.10350580080131544 (ac)SSSSSS(ph)PRETYEEDREYESQAK ddPTM_A549_PD325901_60min_R1 2 SSSSSSPRETYEEDREYESQAK 22 2 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 S(0.083)S(0.083)S(0.058)S(0.086)S(0.086)S(0.603)PRET(0.001)YEEDREYESQAK;S(0.072)S(0.072)S(0.072)S(0.048)S(0.048)S(0.682)PRET(0.007)YEEDREYESQAK 148.09 1.0923999999999997e-98 116519000.0 9795.9 10164.900000000001 9329.0 10252.3 11622.400000000001 11831.900000000001 10197.099999999999 12926.1 11271.6 12104.8 13080.099999999999 True False 10790.372556639559 11021.53179671966 9962.122039834258 10885.56128633733 10806.08271910332 11735.54492925394 10585.156220567222 12668.27879517072 10797.893850044864 11340.50086218191 11471.330621585503 0.9406382670494571 0.9607893068638907 0.8684364846993965 0.9489362346382088 0.9420077823203534 1.023032577159904 0.9227487699333873 1.104342574812806 0.9412939271165771 0.9885950668044201 1.0 13.485745126598157 -7.059220139880934 8.171662599685067 0.9817564288415802 0.9297075817385391 0.26971919791249144 0.049945576860229345 0.41766582898510857 53.772570643685214 0.007216543516065324 0.01256201835401047 8.72528979356582e-08 7.059220139880934 -0.05204884710304114 (ac)SSVAVLTQES(ph)FAEHR ddPTM_A549_MK2206_60min_R1 2 SSVAVLTQESFAEHR 15 0 Q00341;A0A024R4E5;C9JHS7;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JQ82;C9JMQ6;C9J739;C9JHS9 Q00341 HDLBP Vigilin 1 SSVAVLT(0.011)QES(0.988)FAEHR;SSVAVLT(0.001)QES(0.999)FAEHR 65.472 2.2309e-06 1499250.0 411.4 187.19 461.17 424.04999999999995 499.17999999999995 159.71 263.45 135.98 401.57 452.12 559.35 True False 480.83426223568586 196.71717144686505 526.5708405613188 527.9422690363281 425.7512832597473 176.6104061930821 311.31545484796425 155.25558142128472 310.6150361755184 349.98577798902284 420.4479577253473 1.1436237313103688 0.46787519794630145 1.2524043246876586 1.255666151626785 1.0126135124144529 0.42005295292325046 0.7404375479243674 0.3692623036183318 0.7387716611967088 0.832411649428553 1.0 8.71578342716818 -4.940005435614175 18.608314323531967 0.8411326346946856 5.098469041981801 0.08735439210714313 0.29474351220399736 263.99889080290706 86832.65755445093 0.04048367678879802 2703.639435807113 1.1481392513372217e-05 4.940005435614175 4.257336407287116 (ac)SSVAVLTQES(ph)FAEHR ddPTM_A549_PD325901_60min_R1 2 SSVAVLTQESFAEHR 15 0 Q00341;A0A024R4E5;C9JHS7;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JQ82;C9JMQ6;C9J739;C9JHS9 Q00341 HDLBP Vigilin 1 SSVAVLTQES(1)FAEHR;SSVAVLT(0.003)QES(0.997)FAEHR 102.73 4.8802e-15 2583900.0 0.0 378.31 148.55 262.46999999999997 409.99 444.16999999999996 0.0 503.07 301.56 411.83000000000004 277.62 True False 0.0 410.1915113790603 158.63149630371726 278.6821757873802 381.19371678871573 440.5528267840943 0.0 493.0358741992196 288.88648190314854 385.8269835166523 243.47449997817802 0.0 1.6847411594061172 0.6515322808669285 1.1446051878630317 1.565641234802335 1.8094413452890545 0.0 2.025000048232604 1.1865163782204735 1.584671017093096 1.0 7.927626870988002 -5.243853754157452 24.13982163503013 1.159318721308073 1.5255606399575414e-06 0.28184114869319443 0.5577846383964757 2125.955175200737 2918230.123134709 0.06592354797126446 2.6697235825941665 5.703563037224943e-06 5.243853754157452 -1.1593171957474329 (ac)ST(ph)GGDFGNPLRK ddPTM_A549_MK2206_60min_R1 1 STGGDFGNPLRK 12 1 P20340-2;P20340;F5H3K7;F5GX61;P20340-3 P20340-2 RAB6A Ras-related protein Rab-6A 1 S(0.407)T(0.593)GGDFGNPLRK 61.398 0.005739 10080000.0 5182.5 5670.4 5805.9 4968.5 7957.1 5961.4 5136.1 5056.0 8709.4 7986.6 8335.4 True False 6057.179300039961 5958.999139763363 6629.263922664006 6185.782723044442 6786.621130706629 6592.231391142947 6069.26288724475 5772.703483350606 6736.734806053895 6182.421513065405 6265.490134663199 0.9667526673658333 0.9510826785594626 1.0580599091503258 0.9872783437679068 1.0831748171081341 1.052149352956776 0.968681261449469 0.9213490659595329 1.0752127385507453 0.9867418797552285 1.0 12.613211657288117 -5.748524213930263 24.95133528976398 1.026309006517976 0.9589176339227754 0.13228424414951467 0.0481876803083318 265.5441441257696 513006.0500958822 0.006857120043838976 0.02622942018928251 1.7843325009598753e-06 5.748524213930263 -0.06739137259520067 (ac)ST(ph)GGDFGNPLRK ddPTM_A549_PD325901_60min_R1 1 STGGDFGNPLRK 12 1 P20340-2;P20340;F5H3K7;F5GX61;P20340-3 P20340-2 RAB6A Ras-related protein Rab-6A 1 S(0.381)T(0.619)GGDFGNPLRK 58.676 0.011156000000000001 5319300.0 4161.7 4017.1 4468.2 3692.7 5301.5 4124.0 4331.9 4403.2 4610.6 4966.3 5227.8 True False 4584.192720318389 4355.635115013674 4771.438921469331 3920.78969226982 4929.140929182119 4090.4155113078446 4496.752825006638 4315.374721756425 4416.832515793395 4652.726970445941 4584.813741754629 0.9998645481646105 0.9500135360671714 1.040705073363194 0.8551688057821334 1.0751016740967354 0.8921661253227758 0.9807929129277366 0.9412322865933724 0.96336138490613 1.0148126472560524 1.0 12.162647410127978 -10.591447099538554 0.9640686907246357 0.9992568603281075 0.9658331719173971 0.06277922227485866 0.05860286323803882 1.4072673414110548 2.4088848337481066 0.030641978524041186 0.009204302557148663 2.5618452978588662e-11 10.591447099538554 -0.033423688410710306 (ac)STDTGVS(ph)LPSYEEDQGSK ddPTM_A549_MK2206_60min_R1 1 STDTGVSLPSYEEDQGSK 18 0 C9JAW5;C9JNU6;Q9Y241 C9JAW5 HIGD1A HIG1 domain family member 1A, mitochondrial 1 S(0.203)T(0.203)DT(0.203)GVS(0.345)LPS(0.03)Y(0.016)EEDQGSK 52.453 0.00090254 856120.0 310.17 365.36 337.88 313.92 313.63 623.72 423.71 352.89 433.64 520.32 491.76 True False 362.5191130715671 383.95526342126493 385.796464663483 390.8304140924042 267.4954424631488 689.7216364081723 500.6926224089237 402.9132381803 335.421232380785 402.77935062206586 369.6424201144487 0.9807291948779144 1.0387207812955686 1.043701814699819 1.057320244714866 0.7236600235988251 1.8659158118124555 1.354532367399551 1.0900081166429707 0.9074208319405869 1.089645908327722 1.0 8.529986519518424 -8.603137547860642 5.532122793375894 0.9569898895935721 1.1555487186932103 0.05065503034826546 0.272921850808851 0.37777271884561975 19.695383124634958 0.0466520230670727 0.05298476082697426 2.4938047748455225e-09 8.603137547860642 0.19855882909963818 (ac)STGPTAATGS(ph)NRR ddPTM_A549_MK2206_60min_R1 1 STGPTAATGSNRR 13 1 Q15836 Q15836 VAMP3 Vesicle-associated membrane protein 3 1 STGPT(0.001)AAT(0.238)GS(0.761)NRR 55.261 0.056875 54938000.0 129.48 0.0 0.0 125.14 117.91 0.0 0.0 0.0 0.0 130.47 0.0 True False 151.3330585179304 0.0 0.0 155.79930561774813 100.56559519443252 0.0 0.0 0.0 0.0 100.9967363846497 0.0 0.0 (ac)STNENANT(ph)PAAR ddPTM_A549_MK2206_60min_R1 2 STNENANTPAAR 12 0 P52292;J3QLL0;J3KS65;J3QL07 P52292 KPNA2 Importin subunit alpha-1 1 STNENANT(1)PAAR;S(0.264)T(0.264)NENANT(0.472)PAAR 72.089 0.0012388 107778000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)STNENANT(ph)PAAR ddPTM_A549_PD325901_60min_R1 2 STNENANTPAAR 12 0 P52292;J3QLL0;J3KS65;J3QL07 P52292 KPNA2 Importin subunit alpha-1 1 STNENANT(1)PAAR;STNENANT(1)PAAR 126.12 2.5835e-14 231650000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 99.012 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 92.76036542250638 0.0 0.0 (ac)SY(ph)AEKPDEITKDEWMEK ddPTM_A549_PD325901_60min_R1 1 SYAEKPDEITKDEWMEK 17 2 Q9NWU2 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog 1 S(0.193)Y(0.806)AEKPDEIT(0.001)KDEWMEK 56.851000000000006 0.00011714 4665900.0 3891.9 3474.8 3343.3 3450.3 3458.6 3866.5 3084.7 3031.7 3743.0 4318.9 4539.5 True False 4287.002822934649 3767.633590811661 3570.1964428961146 3663.4171948001595 3215.679867522265 3835.01250593399 3202.089946512607 2971.230365177359 3585.6947266331244 4046.2039169319128 3981.1702782614325 1.0768197598437745 0.946363337279052 0.8967705959201552 0.9201860103306019 0.8077222632453049 0.9632877364915752 0.8043087139470337 0.7463208447529374 0.9006634923937463 1.0163353069888987 1.0 11.958976862785578 -4.176192744718946 16.5391421294871 0.9232682368921944 0.9096976560645942 0.0 0.09548796996983583 0.0 0.0 0.012744600764467961 0.0 6.665108986170077e-05 4.176192744718946 -0.01357058082760021 (ac)SY(ph)GRPPPDVEGMTSLK ddPTM_A549_PD325901_60min_R1 1 SYGRPPPDVEGMTSLK 16 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.439)Y(0.561)GRPPPDVEGMTSLK 95.01799999999999 5.6496e-07 6318500.0 3409.1 3659.7 3983.5 3310.0 3446.1 3486.4 3035.3 3487.0 3735.7 3379.1 3952.5 True False 3755.1893223532247 3968.1157627182647 4253.844264731457 3514.4511824445776 3204.057824399606 3458.0079143122343 3150.8100024798905 3417.449049501418 3578.7015202466882 3165.743049319187 3466.367556961851 1.0833211598727621 1.144747548409488 1.2271763437746348 1.0138714734351109 0.9243272018181043 0.9975883565397365 0.9089659277914154 0.9858876744440488 1.0324068239847288 0.9132739091563185 1.0 11.759208923722008 -6.36092748052845 6.899545919284747 0.9976484084534297 1.1505183979694873 0.6696841329911501 0.05413997265855282 0.11481356499427238 6.856709688818663 0.007113566785121508 0.016635545393081656 4.355846025119851e-07 6.36092748052845 0.15286998951605757 (ac)SYPADDYESEAAYDPYAYPS(ph)DYDMHTGDPK ddPTM_A549_PD325901_60min_R1 1 SYPADDYESEAAYDPYAYPSDYDMHTGDPK 30 0 Q9Y262-2;Q9Y262 Q9Y262-2 EIF3L Eukaryotic translation initiation factor 3 subunit L 1 S(0.085)Y(0.08)PADDY(0.08)ES(0.085)EAAY(0.08)DPY(0.08)AY(0.012)PS(0.499)DY(0.001)DMHT(0.001)GDPK 43.896 0.0035439 8510400.0 2174.5 1595.2 2104.6 1996.8 1714.7 1661.4 1965.2 1967.3 2108.1 2318.1 2271.8 True False 2395.2536392177085 1729.6331023548876 2247.4308119879042 2120.137800938167 1594.2653873938661 1647.8701092354145 2039.9867613987024 1928.060658183006 2019.5038881152248 2171.73477039058 1992.3830021267365 1.2022054176636392 0.8681227959225807 1.1280114363497988 1.0641216064757935 0.8001801790579892 0.8270850069873225 1.023892875627403 0.9677158739684736 1.0136122853685956 1.0900187203325853 1.0 10.96027929258804 -5.238756964818135 23.352902818872057 0.9858346509607303 1.2022059989495524 0.2840279640223816 0.10156569914361306 2369.689205361402 2439643.9845345584 0.013043272715396922 0.84693694941437 5.770893175314692e-06 5.238756964818135 0.21637134798882207 (ac)T(ph)EESEETVLYIEHR ddPTM_A549_PD325901_60min_R1 1 TEESEETVLYIEHR 14 0 Q6ZN55;M0R133 Q6ZN55 ZNF574 Zinc finger protein 574 1 T(0.333)EES(0.333)EET(0.333)VLY(0.002)IEHR 46.606 0.017541 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)T(ph)ELASSGGGSPAGDGEEGLGDER ddPTM_A549_MK2206_60min_R1 1 TELASSGGGSPAGDGEEGLGDER 23 0 A0A286YF50;B7ZLF3 A0A286YF50 LOC402624 1 T(0.25)ELAS(0.25)S(0.25)GGGS(0.25)PAGDGEEGLGDER 56.648 2.3732e-05 390540.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)T(ph)ELASSGGGSPAGDGEEGLGDER ddPTM_A549_PD325901_60min_R1 1 TELASSGGGSPAGDGEEGLGDER 23 0 A0A286YF50;B7ZLF3 A0A286YF50 LOC402624 1 T(0.25)ELAS(0.25)S(0.25)GGGS(0.25)PAGDGEEGLGDER 47.201 0.00096677 978580.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)T(ph)T(ph)SQKHR ddPTM_A549_MK2206_60min_R1 2 TTSQKHR 7 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 T(0.925)T(0.925)S(0.15)QKHR;T(0.947)T(0.59)S(0.463)QKHR 60.973 0.013037 227730000.0 7317.7 5462.299999999999 3900.3999999999996 3635.6000000000004 6752.1 6742.299999999999 4860.799999999999 7353.8 5443.3 8264.2 7734.4 True False 8552.748859411948 5740.307738630326 4453.535369875251 4526.322163208285 5758.875034452784 7455.765710823478 5743.94444078567 8396.223670067984 4210.4012411639305 6397.311480263834 5813.735021419374 1.4711280833923983 0.9873700327726458 0.7660368684618787 0.7785566673630787 0.9905637276613966 1.2824398916280875 0.9879955690487137 1.444204739145149 0.724216226857893 1.1003789227913563 1.0 12.505249602438965 (ac)T(ph)T(ph)SQKHR ddPTM_A549_PD325901_60min_R1 2 TTSQKHR 7 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 T(0.667)T(0.667)S(0.667)QKHR;T(0.964)T(0.657)S(0.379)QKHR 46.891000000000005 0.039303 287198000.0 5996.9 6246.5 5474.0 5216.0 6074.599999999999 3697.9 3111.71 3861.2 4404.6 6592.299999999999 7645.5 True False 6605.700873315553 6772.914477093656 5845.498557836072 5538.180473604508 5647.941052232332 3667.785528434838 3230.1278268430488 3784.185336947196 4219.489979409096 6176.0610529510395 6705.151968817661 0.985167958017267 1.0101060361631065 0.8717921062819439 0.8259589789105214 0.8423285674207098 0.5470100521944753 0.4817381980102423 0.5643698091475878 0.6292907303267476 0.9210918830285784 1.0 12.711054315102807 -6.120110154986635 1.4748948276651774 0.7555377755314436 1.0058145579649622 0.31232828427687953 0.15601190124084863 0.6174154562460821 2.4225816838190495 0.029757679375163496 0.1391602583347972 7.58385192878948e-07 6.120110154986635 0.2502767824335186 (ac)T(ph)T(ph)SQKHRDFVAEPMGEKPVGSLAGIGEVLGK ddPTM_A549_MK2206_60min_R1 2 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGK 31 3 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 T(0.827)T(0.853)S(0.315)QKHRDFVAEPMGEKPVGS(0.006)LAGIGEVLGK;T(0.733)T(0.66)S(0.607)QKHRDFVAEPMGEKPVGSLAGIGEVLGK 101.86 1.3771e-10 77881000.0 16476.2 17971.0 20690.5 16064.7 25665.7 20659.1 19005.5 17953.8 28241.1 24097.5 26823.4 True False 19256.979755584856 18885.647139652818 23624.724020716803 20000.552221171798 21890.30952914719 22845.23224959929 22458.55333882327 20498.806131206522 21844.53594176966 18653.858013559406 20162.409491821014 0.9550931778960521 0.9366761024923077 1.1717212682492286 0.9919723249984148 1.085699084627118 1.1330606224849553 1.1138824131081009 1.016684347152158 1.0834288407162354 0.9251799999958557 1.0 14.299380436749633 -5.693715618725139 24.999993403600595 1.0563687761076646 0.9458829995711628 0.2895813606934957 0.06766734404355344 43.90682818433698 16206.816363802465 0.007856878094280236 0.030429554190545823 2.0243443098917003e-06 5.693715618725139 -0.11048577653650171 (ac)T(ph)T(ph)SQKHRDFVAEPMGEKPVGSLAGIGEVLGK ddPTM_A549_PD325901_60min_R1 5 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGK 31 3 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 T(0.654)T(0.654)S(0.654)QKHRDFVAEPMGEKPVGS(0.039)LAGIGEVLGK;T(0.659)T(0.659)S(0.659)QKHRDFVAEPMGEKPVGS(0.024)LAGIGEVLGK;T(0.721)T(0.721)S(0.555)QKHRDFVAEPMGEKPVGS(0.004)LAGIGEVLGK;T(0.667)T(0.667)S(0.667)QKHRDFVAEPMGEKPVGSLAGIGEVLGK;T(0.947)T(0.526)S(0.526)QKHRDFVAEPMGEKPVGSLAGIGEVLGK 101.77 1.0234999999999999e-21 267268700.0 35889.5 43831.799999999996 50424.600000000006 49448.8 47451.799999999996 53627.3 48048.799999999996 55249.2 51708.8 54842.0 52537.7 True False 39532.975619546494 47525.65961371545 53846.71658375242 52503.140069627036 44118.94926782306 53190.577048874664 49877.323377312234 54147.21136384104 49535.65895819579 51379.266760605715 46075.895963920164 0.857996893874899 1.0314646871095143 1.1686526210128874 1.1394925474859945 0.9575277559956838 1.1544122135036867 1.0825036026726162 1.175174355941795 1.0750883498171104 1.115100763332706 1.0 15.491724599450729 -4.145310892441931 12.442011926827695 1.055329876556027 0.5803228582002615 0.0 0.09579489416498843 0.0 0.0 0.012112008922634762 0.0 7.156309378894954e-05 4.145310892441931 -0.47500701835576553 (ac)T(ph)TPGKENFR ddPTM_A549_MK2206_60min_R1 2 TTPGKENFR 9 1 C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294 C9J352 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed 1 T(0.979)T(0.021)PGKENFR;T(0.982)T(0.018)PGKENFR 87.181 0.00040934 156259000.0 11181.3 11696.8 11296.599999999999 11164.5 16343.900000000001 11024.9 11499.3 12343.2 18925.8 16433.0 19503.9 True False 13068.43008346104 12292.117158927787 12898.627745701135 13899.803001193455 13939.733960633415 12191.547600263675 13588.573960649825 14092.886399464634 14639.136518292276 12720.773886785839 14660.543349744172 0.8914014829940861 0.8384489486975452 0.8798192152902857 0.948109675719216 0.9508333782783477 0.8315890693421277 0.9268806507698056 0.96127995144945 0.9985398336922984 0.8676877509459987 1.0 13.839650953243204 -8.334904809390888 2.0983142770878356 0.9992565944735633 0.8922556654442858 0.12515917681507804 0.05323841504552452 0.1479029117604198 1.2721327371365592 0.006283756910869314 0.00786904970227129 4.62482379249485e-09 8.334904809390888 -0.10700092902927749 (ac)T(ph)TPGKENFR ddPTM_A549_PD325901_60min_R1 2 TTPGKENFR 9 1 C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294 C9J352 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed 1 T(0.975)T(0.025)PGKENFR;T(0.841)T(0.159)PGKENFR 82.45200000000001 0.00041756 206421000.0 18549.800000000003 20014.9 17457.800000000003 22706.0 21620.0 19936.1 18917.199999999997 19820.4 22336.0 20446.0 23702.0 True False 20432.962040359 21701.625865297676 18642.591290279597 24108.498050932507 20101.485784950954 19773.747011392894 19637.104397889038 19425.066573197 21397.295595532316 19155.036070663802 20786.804259357305 0.9829775556365756 1.0440097282163303 0.8968473969194916 1.1597981945724014 0.9670310805905699 0.9512644062394354 0.9446908795058903 0.9344902819514784 1.0293691771259257 0.9214998049563606 1.0 14.34338035642952 (ac)T(ph)TPNKGNK ddPTM_A549_PD325901_60min_R1 2 TTPNKGNK 8 1 I3L2F8;O15525 I3L2F8 MAFG Transcription factor MafG 1 T(0.5)T(0.5)PNKGNK;T(0.5)T(0.5)PNKGNK 57.103 0.0048683 11188000.0 3618.9 3717.5 3761.4 3158.3 3755.0 3195.9 3347.4 3141.2 3806.1 4176.0 5997.5 True False 3986.288063906628 4030.786771567384 4016.671223135659 3353.3810179802754 3491.261754046752 3169.873649997267 3474.7871387675655 3078.5463017762695 3646.1428530692842 3912.3266473193826 5259.84552128493 0.7578716994207114 0.7663317782349436 0.7636481350795307 0.6375436321105256 0.6637574696668791 0.6026552751729668 0.6606253215434182 0.5852921515125048 0.6932034103120516 0.7438101806388485 1.0 12.360804713657071 -10.449886459929823 0.8033341743964282 0.999163976029811 0.6794449869386161 0.255272146355935 0.09395544970703407 0.23695120867871522 0.27770955545795056 0.04418761672004648 0.013132749062285775 3.549061622373535e-11 10.449886459929823 -0.3197189890911949 (ac)T(ph)TPNKTPPGADPK ddPTM_A549_MK2206_60min_R1 1 TTPNKTPPGADPK 13 1 D6RB36;D6R9Q5;A0A3B3ISY7;A0A286YEY6;D6RD74;D6RA92;Q9UM13 D6RB36 ANAPC10 Anaphase-promoting complex subunit 10 1 T(0.499)T(0.499)PNKT(0.002)PPGADPK 66.595 1.6231e-06 4048900.0 1847.5 1907.1 1936.2 1863.7 2289.3 2080.2 1650.2 1842.6 2434.9 2803.3 2868.5 True False 2159.3128329616648 2004.163244117295 2210.7822744212035 2320.3065836646733 1952.5470026173734 2300.325383274995 1950.0199794652149 2103.7941927258375 1883.399037736311 2170.032583023594 2156.1722834274774 1.0014565392377621 0.9295005132574347 1.025327285492659 1.0761229988432492 0.905561683370487 1.0668560211795184 0.9043896883626755 0.9757078360091064 0.8734919061024369 1.00642819671816 1.0 11.074256742212714 -7.784611432357063 24.993146804697684 0.9395194296006664 0.9977722061601537 0.12428059901078381 0.06021636487178606 323.4247759154665 348841.5853965123 0.009867471816641504 0.013638166546811428 1.642058282224578e-08 7.784611432357063 0.05825277655948735 (ac)T(ph)TS(ph)QKHR ddPTM_A549_MK2206_60min_R1 1 TTSQKHR 7 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 T(0.898)T(0.319)S(0.783)QKHR 49.715 0.0075143 13582000.0 1040.6 749.38 464.87 599.01 774.17 825.62 557.87 911.09 584.19 1226.3 996.5 True False 1216.2278397726172 787.5202411392258 530.7955561978017 745.7674768905811 660.2906185367979 912.986560397799 659.2277578137553 1040.2397975961053 451.8718977597339 949.2779782976609 749.0415479991213 1.623712119870344 1.0513705724907927 0.7086329958807898 0.9956289859791007 0.8815140098711486 1.21887305562237 0.8800950488991147 1.3887611446585946 0.6032668000417301 1.2673235294269343 1.0 9.548901934399803 -8.778154885307808 24.999833464634 0.8126538027350814 1.066062685298931 0.0 0.29009396030396006 329.6809457660369 493071.4150014656 0.04649098070990732 0.04955853922420855 1.666652717188051e-09 8.778154885307808 0.25340888256384964 (ac)T(ph)TS(ph)QKHRDFVAEPMGEKPVGSLAGIGEVLGK ddPTM_A549_MK2206_60min_R1 1 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGK 31 3 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 T(0.646)T(0.629)S(0.688)QKHRDFVAEPMGEKPVGS(0.037)LAGIGEVLGK 42.461000000000006 0.0085104 14525000.0 4220.4 4201.0 5248.3 4537.6 6739.9 5065.7 5228.3 4576.3 7156.4 6281.6 6407.0 True False 4932.7003411266105 4414.812956078212 5992.5878580956505 5649.312203700608 5748.469638291539 5601.749011660488 6178.214433788621 5225.00453933097 5535.486826422496 4862.582197239332 4815.965075795659 1.024239225885928 0.9167036900384558 1.2443171334886807 1.1730384491559607 1.193627766775659 1.1631622994556303 1.2828611371871093 1.0849340593417267 1.1494034402871918 1.0096797050456126 1.0 12.233609214725005 -10.627882571139686 0.8310708012830644 0.9971005963686909 1.1403178784170729 0.21622274738818192 0.09649727276433256 0.8359260599351859 0.9963198514512107 0.07511097324450527 0.01870749650727515 2.355686151635659e-11 10.627882571139686 0.14321728204838202 (ac)T(ph)TSQKHR ddPTM_A549_MK2206_60min_R1 1 TTSQKHR 7 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 T(0.495)T(0.253)S(0.253)QKHR 62.717 0.011698 223710000.0 557.04 661.83 428.78 288.91 545.53 544.43 640.7 584.2 406.58 774.02 855.44 True False 651.0547336795491 695.5143200955107 489.587451516539 359.69296296966274 465.2832596592212 602.0412212366143 757.1068966448688 667.0121390374652 314.49027917484466 599.1683444197636 643.0106390570684 1.0125100490316565 1.0816528963120042 0.7613986795529323 0.5593888205288923 0.7236011838645899 0.936285007849119 1.177440699511776 1.0373267540574342 0.48909031993004565 0.9318171551537676 1.0 9.32869879791565 (ac)T(ph)TSQKHR ddPTM_A549_PD325901_60min_R1 1 TTSQKHR 7 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 T(0.473)T(0.473)S(0.055)QKHR 62.842 0.0068628 53030000.0 2024.7 1822.7 1390.3 1578.9 1739.8 1692.7 797.91 881.05 1522.6 1575.5 2324.9 True False 2230.246053494638 1976.3053257662061 1484.6541185530675 1676.4250670579304 1617.602449984165 1678.9152124128966 828.2749016831057 863.4767665796459 1458.610416984128 1476.0226611234878 2038.952038755371 1.0938197716784148 0.9692750433563871 0.7281456799049274 0.8221993628066228 0.793349926451233 0.823420649677346 0.40622578949365873 0.42349047460024336 0.7153725979128482 0.7239123986577389 1.0 10.993612124624946 -5.579889489105895 3.785786279778168 0.785769457616667 1.0743674744646559 0.270819599858644 0.17514865252103692 0.2800825275337395 7.907553627348874 0.02938753679009699 0.14536615210056403 2.630937376990606e-06 5.579889489105895 0.2885980168479888 (ac)T(ph)TSQKHRDFVAEPMGEKPVGSLAGIGEVLGK ddPTM_A549_MK2206_60min_R1 2 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGK 31 3 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 T(0.333)T(0.333)S(0.333)QKHRDFVAEPMGEKPVGSLAGIGEVLGK;T(0.372)T(0.314)S(0.314)QKHRDFVAEPMGEKPVGSLAGIGEVLGK 85.069 4.9811e-37 15724600.0 2813.1000000000004 3511.1000000000004 3745.7 3423.0 4258.5 3602.8 3114.3 2832.3 5329.5 4498.8 4867.1 True False 3287.882506308233 3689.7999928793647 4276.89658366878 4261.6351536643115 3632.0802912008367 3984.0459046549145 3680.1279978478483 3233.7871985549714 4122.376759462676 3482.5179554477027 3658.464744873583 0.8987055323999971 1.0085651359766934 1.1690413553012295 1.1648698158526523 0.9927881077138387 1.088993931194103 1.0059214054213919 0.8839191912635784 1.126805107316983 0.95190693318217 1.0 11.837022640923076 -11.353444919265048 2.0132548947752067 0.9996155772064957 1.0557189129378814 0.019831029037564396 0.09356153848336228 1.0428079299001898 7.639093783594939 0.07444015303862425 0.014122592940676975 4.4315441534859304e-12 11.353444919265048 0.056103335731385706 (ac)T(ph)TSQKHRDFVAEPMGEKPVGSLAGIGEVLGK ddPTM_A549_PD325901_60min_R1 2 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGK 31 3 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 T(0.456)T(0.456)S(0.088)QKHRDFVAEPMGEKPVGSLAGIGEVLGK;T(0.491)T(0.416)S(0.092)QKHRDFVAEPMGEKPVGS(0.001)LAGIGEVLGK 79.458 1.2139999999999999e-67 45803000.0 5526.5 5583.9 7929.2 7916.700000000001 6916.7 10613.3 7742.3 8423.2 8626.5 7413.3 9094.3 True False 6087.546211605729 6054.474849698756 8467.323194153041 8405.696578869789 6430.894853319619 10526.868803628404 8036.937463249122 8255.19266812743 8263.958204461833 6945.222972838311 7975.758753517559 0.7632560612394313 0.7591095765062532 1.0616323105834522 1.053905570446525 0.8063050867083201 1.3198579757676003 1.0076705817743774 1.0350354020533323 1.0361344243037904 0.87079150554488 1.0 12.961406057190631 -5.757421025053617 24.97886367046613 1.028773588668057 0.7611826904061453 0.4043975589237696 0.12145604050848705 58.33866027362559 362628.6320095109 0.013884933295740639 0.050095133803475286 1.7481511287400254e-06 5.757421025053617 -0.2675908982619116 (ac)TEESEET(ph)VLYIEHR ddPTM_A549_PD325901_60min_R1 1 TEESEETVLYIEHR 14 0 Q6ZN55;M0R133 Q6ZN55 ZNF574 Zinc finger protein 574 1 T(0.037)EES(0.037)EET(0.927)VLYIEHR 72.265 3.0761e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)TELASSGGGS(ph)PAGDGEEGLGDER ddPTM_A549_PD325901_60min_R1 1 TELASSGGGSPAGDGEEGLGDER 23 0 A0A286YF50;B7ZLF3 A0A286YF50 LOC402624 1 T(0.075)ELAS(0.075)S(0.075)GGGS(0.776)PAGDGEEGLGDER 66.827 3.1108e-05 572710.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ac)TEVMMNTQPMEEIGLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TEVMMNTQPMEEIGLSPR 18 0 B5MBX5 B5MBX5 LBH 1 T(0.001)EVMMNT(0.001)QPMEEIGLS(0.997)PR;TEVMMNTQPMEEIGLS(1)PR 49.049 0.0013719000000000001 1590900.0 655.3199999999999 949.1600000000001 712.6600000000001 474.42999999999995 1154.5500000000002 1058.4 688.8399999999999 1086.28 1483.5700000000002 852.8 867.87 True False 765.9219949642434 997.4681898098538 813.7259041881082 590.6653712979717 984.717224423137 1170.3991854909402 813.9933115106161 1240.263516592978 1147.5437637744706 660.151887704677 652.3539270065208 1.1740896517307042 1.529029179585031 1.2473687526065498 0.90543698266427 1.509483094463374 1.7941168697513505 1.2477786640234014 1.9012126167220582 1.7590815602816168 1.0119535736282588 1.0 9.349511083985194 -5.235183934527726 21.0839670305921 1.4011272216049395 1.1740872727556124 0.03434851079517842 0.3255740338328052 2946.4458684954407 2365764.990770668 0.04915492288791428 3.5680104448329706 5.818567347623581e-06 5.235183934527726 -0.2270399488493271 (ac)TEWETAAPAVAET(ph)PDIK ddPTM_A549_MK2206_60min_R1 2 TEWETAAPAVAETPDIK 17 0 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 TEWETAAPAVAET(1)PDIK;TEWETAAPAVAET(1)PDIK 68.257 1.0208e-08 4403500.0 1769.31 1736.0900000000001 1560.6100000000001 1700.05 2674.0 2271.24 1891.44 1732.8 3567.0 2845.3999999999996 3160.5 True False 2067.926272523629 1824.4495655600617 1781.927964716698 2116.5623263181437 2280.6581422263816 2511.5811092729045 2235.0901648040754 1978.4297064774394 2759.080195328524 2202.6221637838757 2375.6606246374536 0.8704636727475383 0.7679756723831244 0.7500768191536767 0.8909363165629558 0.9600100782806171 1.0572137632900296 0.940828896865338 0.8327913869344722 1.161394925990148 0.9271619611576527 1.0 11.214113039099207 -6.947881394647196 0.6553304691141351 1.0612963634450576 0.7724882527292201 0.30075652605902636 0.09710523017746121 0.5302571564486597 0.4037889063817567 0.019724041192751274 0.07612741389193955 1.1275053346191154e-07 6.947881394647196 -0.28880811071583756 (ac)TEWETAAPAVAET(ph)PDIK ddPTM_A549_PD325901_60min_R1 2 TEWETAAPAVAETPDIK 17 0 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 TEWETAAPAVAET(1)PDIK;TEWETAAPAVAET(1)PDIK 83.10600000000001 1.4123e-16 7829700.0 3213.5 2846.7 1898.6799999999998 3085.6000000000004 2999.0 3039.2 2243.7 2821.7 3077.5 2905.8 3595.2 True False 3539.7321543463327 3086.6013994945174 2027.5358424903516 3276.1905040939573 2788.3605859883387 3014.449762843547 2329.0852312997517 2765.4189799191727 2948.1633772945315 2722.3272920930713 3153.013191850535 1.1226506008586754 0.9789370394872849 0.6430470534442548 1.0390665388149323 0.8843478971782615 0.9560536475504996 0.7386855333557258 0.8770718077129644 0.9350304606763238 0.8634049800772671 1.0 11.62251549076882 -9.634249134586062 1.181347777756575 0.9864455123841659 0.9009757547823842 0.0 0.13047814382010117 0.8136969214797896 2.3312339330122054 0.033061136449923124 0.023452748133983785 2.3214047321773771e-10 9.634249134586062 -0.08546975760178166 (ac)TT(ph)S(ph)QKHRDFVAEPMGEKPVGSLAGIGEVLGK ddPTM_A549_MK2206_60min_R1 1 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGK 31 3 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 T(0.63)T(0.683)S(0.683)QKHRDFVAEPMGEKPVGS(0.004)LAGIGEVLGK 48.76 0.0014372999999999999 11149000.0 3187.2 2608.7 3431.8 2747.0 4685.2 3526.6 3543.6 3050.3 4225.7 4404.3 4875.2 True False 3725.121440441363 2741.471687341401 3918.480843589856 3420.015123317515 3996.0132864469115 3899.7824712323772 4187.426250898638 3482.689366151969 3268.5856970562772 3409.365571080806 3664.553291324956 1.0165281125150478 0.7481052858014774 1.0692929075055393 0.9332693104542013 1.0904503137958497 1.0641904104558326 1.1426839557256463 0.9503721434196329 0.8919465586143754 0.9303632121142155 1.0 11.839421629359869 -4.894728118517743 20.4374427918505 0.9706821805721163 7.515117284691594 0.0 0.1055005503598614 3309.9329317984093 644297.1084994375 0.01425507975637227 2688.1752532528685 1.27430058207028e-05 4.894728118517743 6.5444351041194775 (ac)TT(ph)S(ph)QKHRDFVAEPMGEKPVGSLAGIGEVLGK ddPTM_A549_PD325901_60min_R1 1 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGK 31 3 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 2 T(0.608)T(0.67)S(0.721)QKHRDFVAEPMGEKPVGSLAGIGEVLGK 85.814 3.5388000000000004e-07 34824000.0 8794.9 9825.0 11322.0 12906.0 11250.0 13252.0 11479.0 12102.0 12826.0 13802.0 14079.0 True False 9687.751773536822 10652.987230840501 12090.379004716846 13703.174308347361 10459.838810393061 13144.080105686597 11915.839626549821 11860.616116164667 12286.967823616462 12930.539364535942 12347.372254134314 0.7846002836994761 0.8627736340640029 0.9791864014360288 1.1098049063645166 0.8471307574687202 1.0645244862756542 0.9650506505592717 0.9605781596317657 0.9951079120905562 1.0472300582179632 1.0 13.591916422225694 -5.637002733201382 2.94056773537811 0.9943317452742245 0.7952511129818941 0.5348284238153236 0.06400533039597608 0.13021056978490203 2.123747171339181 0.007549047400915153 0.04079732676289316 2.3067326714166546e-06 5.637002733201382 -0.19908063229233042 (ac)TT(ph)SQKHR ddPTM_A549_PD325901_60min_R1 2 TTSQKHR 7 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 T(0.126)T(0.437)S(0.437)QKHR;T(0.142)T(0.429)S(0.429)QKHR 72.547 0.0042938 428720000.0 2841.4 2688.5 1875.03 1586.6399999999999 2076.3 2042.6 1188.1799999999998 1369.87 1563.0500000000002 1681.18 3080.8 True False 3129.856836271875 2915.06933029157 2002.2808112713506 1684.6431492791132 1930.4678508461452 2025.9657428218723 1233.3968400970439 1342.5468682077749 1497.3604441527928 1575.0300078880268 2701.8811308002696 1.15839916145565 1.0789036190604568 0.7410691715657733 0.6235075000431789 0.7144902967194416 0.7498352609693831 0.456495597099686 0.49689338768583285 0.5541918284574162 0.5829383054396323 1.0 11.399748489385898 -5.732829322059456 4.19791146739242 0.7218162137684866 1.13769150707114 0.5495828808492339 0.152837431434372 0.1639832514691302 6.325971613906491 0.028258391845060172 0.1141748161689465 1.8499955252638472e-06 5.732829322059456 0.4158752933026534 (ac)TTS(ph)QKHR ddPTM_A549_MK2206_60min_R1 1 TTSQKHR 7 1 O75531;E9PJJ8 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 T(0.122)T(0.072)S(0.806)QKHR 70.919 0.0045609 195380000.0 965.34 1102.9 703.64 403.7 559.28 735.59 853.07 1030.3 893.15 928.37 1199.4 True False 1128.2657917029576 1159.03289913322 803.4267325553843 502.6065181227817 477.0106528737359 813.4296455548766 1008.0617766830627 1176.348180161419 690.8529510674715 718.6505722190332 901.5558782440007 1.2514651825026415 1.285591860807029 0.8911557807379097 0.5574879275389232 0.5290971579075389 0.9022509477052367 1.1181356597069814 1.3047978595099874 0.766289664056182 0.7971226072185119 1.0 9.816273102139167 -5.763682801663639 23.229831079540993 0.8852292829116034 1.2685287406377728 0.3362248134303517 0.213310824894159 20.667914208757548 214044.24060036696 0.03167994337750122 0.1061308376059712 1.7231266461219121e-06 5.763682801663639 0.38329945772616936 (ac)TTS(ph)QKHRDFVAEPMGEKPVGSLAGIGEVLGK ddPTM_A549_PD325901_60min_R1 1 TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGK 31 3 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 1 T(0.313)T(0.313)S(0.374)QKHRDFVAEPMGEKPVGSLAGIGEVLGK 66.083 7.2416999999999984e-68 14174000.0 3649.3 3797.3 4422.4 3946.6 3798.4 7026.6 5079.8 4528.6 4776.1 4048.5 5462.8 True False 4019.7742495273314 4117.311797625509 4722.530658051562 4190.3725186210795 3531.613487768624 6969.377699261809 5273.1145687732205 4438.273520382027 4575.377126335148 3792.8770190786668 4790.910231542365 0.8390418637072277 0.8594007398673381 0.98572722714765 0.8746506020990606 0.7371487498382268 1.4547084713415965 1.1006498376980896 0.9263946318929853 0.9550120760376198 0.7916819217582385 1.0 12.226084066255543 (ac)VDREQLVQK ddPTM_A549_MK2206_60min_R1 2 VDREQLVQK 9 1 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ; 65.252 0.00050989 5551700.0 3043.2 4344.0 2826.9 2474.8 4033.3 3168.1000000000004 2724.2 2223.4 4094.1 4504.6 4586.299999999999 False True 3556.8177609033487 4565.091045275826 3227.7969277767274 3081.1261110979954 3440.0069128802033 3503.34623918542 3219.1518773840353 2538.573758876926 3166.792886934258 3487.007731419428 3447.3951345593305 1.0317406685549568 1.3242146220814248 0.936300250417719 0.8937548470178037 0.9978568683336987 1.016229965652963 0.9337925453084244 0.7363744681972535 0.9186045588995295 1.0114905879117222 1.0 11.751290952093235 -5.78507766655524 24.993210415031555 0.944263595595195 1.1779776306716425 0.4714600138156372 0.09772336705891095 122.694390687176 129727.27163458313 0.0129348596922398 0.04024790254681861 1.640296406443058e-06 5.78507766655524 0.2337140350764475 (ac)VDREQLVQK ddPTM_A549_PD325901_60min_R1 1 VDREQLVQK 9 1 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 63.486000000000004 0.00034735 5633300.0 2541.0 2450.9 2191.5 2687.6 2814.2 2613.8 2512.8 2487.5 2264.1 3056.1 3405.9 False True 2798.9604494146665 2657.445944434297 2340.228368560055 2853.6069480175397 2616.5403004629493 2592.514079402629 2608.4259790569195 2437.884861094 2168.947750619837 2863.1373244427123 2986.995891778966 0.9370486437956528 0.8896717775033836 0.7834722421282891 0.9553434458585801 0.8759772009276571 0.8679335939289172 0.873260651692232 0.816166124568075 0.7261301418556944 0.9585340684005805 1.0 11.54447953807437 -5.373405410148794 4.323134037640452 0.8655283382410652 0.9359926014353289 0.04690432562800062 0.07611615261681062 0.6149307910365357 17.343649392644735 0.013559845382883006 0.09486046571597548 4.23247683523939e-06 5.373405410148794 0.07046426319426369 (ac)VS(ph)GTFR ddPTM_A549_MK2206_60min_R1 1 VSGTFR 6 0 A0A1B0GU42;A0A1B0GTP5 A0A1B0GU42 1 VS(0.995)GT(0.005)FR 40.33 0.051082999999999996 4081200.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 116.27 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 87.39695011124722 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 6.4495110298060006 -10.632928445752034 0.679319263200112 1.082152444714398 6.834839394132852e-26 0.0 0.29327865860305147 0.06440817340675754 0.046900237562256634 0.039956722371451286 0.008142451977166855 2.328474864986929e-11 10.632928445752034 -1.082152444714398 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLS(ph)GPAEVGPGAVGERTPR ddPTM_A549_MK2206_60min_R1 1 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR 55 1 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 AAAAAAAAAAAAT(0.001)GT(0.003)EAGPGT(0.072)AGGS(0.072)ENGS(0.072)EVAAQPAGLS(0.39)GPAEVGPGAVGERT(0.39)PR 56.394 3.0697e-05 14005000.0 297.84 0.0 0.0 326.43 284.9 0.0 364.47 0.0 385.01 477.73 417.44 True False 348.1081105111244 0.0 0.0 406.4053646539998 242.991587404748 0.0 430.68948122390435 0.0 297.8058497346325 369.8104612021052 313.7781272421009 1.1094084650538296 0.0 0.0 1.2951997904571302 0.7744057546027219 0.0 1.3725924270419223 0.0 0.949096905995794 1.1785731033979039 1.0 8.293600978603473 -8.954720434885662 24.983520930278257 0.9775438997773602 0.5639408605786 0.14373355737633065 0.5084308795579133 187.0231469952027 103192.49407507745 0.08193725755324438 0.08719294496981166 1.1098890458668511e-09 8.954720434885662 -0.4136030391987602 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLS(ph)GPAEVGPGAVGERTPR ddPTM_A549_PD325901_60min_R1 1 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR 55 1 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLS(0.581)GPAEVGPGAVGERT(0.419)PR 89.32600000000001 3.417e-14 12434000.0 312.57 482.91 470.51 335.3 328.42 557.15 544.77 477.41 306.07 232.48 604.53 True False 344.3018762981277 523.6065204727923 502.4416380064762 356.0107194784494 305.3529121874927 552.612755122494 565.5015204595823 467.88768302910034 293.2069422870959 217.80117312471495 530.1766424314096 0.6494097414762495 0.9876076736830833 0.947687238167001 0.671494537831337 0.5759456146297448 1.0423181839701416 1.0666285068051498 0.8825128185265767 0.5530363256714556 0.41080869222354033 1.0 9.050329301717616 -6.199120543485545 24.992894527334588 0.807833917461392 0.874171971774664 0.01363197361239843 0.21912305012423894 1069.3332097272385 428851.6247394167 0.03053407638622544 0.08078556798497032 6.32236342468499e-07 6.199120543485545 0.066338054313272 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERT(ph)PR ddPTM_A549_PD325901_60min_R1 3 AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR 55 1 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 AAAAAAAAAAAATGTEAGPGT(0.001)AGGS(0.002)ENGS(0.002)EVAAQPAGLS(0.443)GPAEVGPGAVGERT(0.552)PR;AAAAAAAAAAAATGTEAGPGT(0.001)AGGS(0.001)ENGS(0.001)EVAAQPAGLS(0.404)GPAEVGPGAVGERT(0.594)PR;AAAAAAAAAAAAT(0.001)GT(0.002)EAGPGT(0.005)AGGS(0.02)ENGS(0.02)EVAAQPAGLS(0.209)GPAEVGPGAVGERT(0.743)PR 95.421 2.0101e-14 42914000.0 2190.0299999999997 1945.2 2178.3 1597.61 2613.5200000000004 2168.37 2445.63 2238.81 2198.23 2233.17 2944.6400000000003 True False 2412.3602333851263 2109.1288306799934 2326.132537182009 1696.2907412644367 2429.9553713545315 2150.711513640782 2538.699787950085 2194.155178237532 2105.8460376507423 2092.1672650848227 2582.4679476109163 0.9341297868253662 0.816710554967849 0.9007401386468136 0.6568487104878507 0.9409430903498816 0.8328124713533969 0.9830518091419791 0.8496350091265918 0.8154393705443257 0.8101425874502416 1.0 11.334534727804796 AAAAAAAATMALAAPS(ph)SPTPESPTMLTK ddPTM_A549_MK2206_60min_R1 1 AAAAAAAATMALAAPSSPTPESPTMLTK 28 0 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 AAAAAAAAT(0.002)MALAAPS(0.322)S(0.322)PT(0.322)PES(0.028)PT(0.003)MLT(0.001)K 56.681000000000004 0.0022374 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AAAAAAAATMALAAPS(ph)SPTPESPTMLTK ddPTM_A549_PD325901_60min_R1 2 AAAAAAAATMALAAPSSPTPESPTMLTK 28 0 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 AAAAAAAATMALAAPS(0.189)S(0.189)PT(0.189)PES(0.189)PT(0.189)MLT(0.055)K;AAAAAAAATMALAAPS(0.457)S(0.457)PT(0.073)PES(0.004)PT(0.006)MLT(0.002)K 92.88600000000001 3.3570999999999997e-10 4731900.0 2070.78 2628.8999999999996 2845.5 2843.7 3857.3999999999996 3815.8 3388.8 4149.6 4639.6 3431.8999999999996 3400.7 True False 2281.004061172336 2850.446629125351 3038.612741381539 3019.348890488717 3586.4695313075727 3784.7253899244597 3517.762638422516 4066.832972701776 4444.613746643612 3215.2092483082833 2982.4354588134515 0.7648125475546161 0.9557446149260137 1.0188360430070924 1.0123769423295255 1.2025304757925703 1.269004959936399 1.1794932990174554 1.3635946289076601 1.4902631785406286 1.078048223577465 1.0 11.542275202378981 -6.102941685928542 0.8505065641889064 1.2475926674823852 0.780987244160572 0.5534164803825941 0.13059356542222839 0.7347659974347347 0.7475520844735871 0.02939266946902449 0.24381338751701984 7.889660474328083e-07 6.102941685928542 -0.4666054233218132 AAAAAAALQAK ddPTM_A549_MK2206_60min_R1 2 AAAAAAALQAK 11 0 P36578;H3BM89;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 ; 182.39 4.2149e-18 6586300.0 8688.3 9792.9 9026.9 8267.1 11162.400000000001 9773.7 9068.599999999999 9150.4 12555.8 12605.3 13036.0 False True 10154.672631459183 10291.316781142183 10307.05015647803 10292.539871124216 9520.425746741865 10807.94644674302 10716.247234140248 10447.497221924725 9711.931347492533 9757.753975238946 9798.801424703011 1.0363178302459535 1.0502628163478778 1.0518684591866216 1.0503876367140657 0.9715908440332962 1.1029865774701721 1.0936283704172567 1.0662015453835338 0.9911346221394509 0.9958109724154034 1.0 13.25838957629931 -8.766646617301305 24.993330890829156 0.9958135675226226 1.053015232692507 0.3879486229504602 0.032028951846220406 94.42472411418287 453212.60656907957 0.0056131037484238415 0.0060644881346065506 1.7114073100894569e-09 8.766646617301305 0.05720166516988445 AAAAAAALQAK ddPTM_A549_PD325901_60min_R1 2 AAAAAAALQAK 11 0 P36578;H3BM89;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 ; 182.39 4.2149e-18 10714100.0 11314.8 10705.400000000001 11165.0 11419.0 15059.4 13975.7 12721.0 11832.7 14037.1 12646.599999999999 14099.400000000001 False True 12463.470166484478 11607.581628604567 11922.72404059915 12124.325695569385 14001.679696109624 13861.886532828568 13205.104616198303 11596.687515926433 13447.169502330156 11848.091517717736 12365.263183460578 1.0079421668238537 0.9387249956903898 0.9642111019963283 0.9805149729272674 1.132339804529019 1.1210344921222406 1.0679194142718347 0.937843970150011 1.087495615970124 0.9581754421179974 1.0 13.594005326065224 -6.552211521205873 24.955190108557723 1.0479997688814866 0.9680071078366655 0.2430778478041702 0.0598311068346405 193.3298632399849 164476.97000377098 0.008342410432928774 0.017366299308779913 2.8040675966002057e-07 6.552211521205873 -0.07999266104482106 AAAAAAT(ph)APPSPGPAQPGPR ddPTM_A549_PD325901_60min_R1 1 AAAAAATAPPSPGPAQPGPR 20 0 Q6SPF0 Q6SPF0 SAMD1 Atherin 1 AAAAAAT(0.795)APPS(0.205)PGPAQPGPR 85.56299999999999 3.8795e-05 14521000.0 3459.7 3316.1 3414.7 3831.1 2995.7 3496.3 3637.4 3598.1 3607.6 3160.4 3648.4 True False 3810.926197103475 3595.5593848539615 3646.442076259193 4067.7383459406124 2785.2923666039565 3467.82729199457 3775.8232474616534 3526.3330728451547 3455.9851177669393 2960.8518046427603 3199.6699291131217 1.191037288699269 1.1237282171322502 1.1396306984920495 1.271299364015369 0.8704936535050596 1.0838078204384587 1.1800664853290754 1.1020927629940183 1.0801067592384013 0.9253616373684656 1.0 11.643707372214651 -9.297801957887936 0.017691353742404166 4.152313621007138e-07 2.130327620101838 0.29376753301425307 0.09426955923463802 456.143537015451 4.402960008370199 272.0389636355514 257.3372235233318 5.037302618618155e-10 9.297801957887936 2.130327204870476 AAAAAATAPPS(ph)PGPAQPGPR ddPTM_A549_MK2206_60min_R1 6 AAAAAATAPPSPGPAQPGPR 20 0 Q6SPF0 Q6SPF0 SAMD1 Atherin 1 AAAAAATAPPS(1)PGPAQPGPR;AAAAAAT(0.174)APPS(0.826)PGPAQPGPR;AAAAAATAPPS(1)PGPAQPGPR;AAAAAAT(0.036)APPS(0.964)PGPAQPGPR;AAAAAATAPPS(1)PGPAQPGPR;AAAAAATAPPS(1)PGPAQPGPR 237.06 3.177499999999999e-85 107999800.0 8385.5 10126.6 10239.52 9783.699999999999 11994.900000000001 8375.75 8664.75 8105.689999999999 14154.7 13111.300000000001 14241.600000000002 True False 9800.767394208418 10642.000685794235 11691.637906508306 12180.706939206988 10230.466099547953 9262.066305627119 10239.022916659333 9254.696380134534 10948.683050411164 10149.44822380668 10705.017671835712 0.9155302396177892 0.9941133225583297 1.0921642789313963 1.1378502411307296 0.9556701738534933 0.8652079416921546 0.9564695015495037 0.8645194864538253 1.0227617913435605 0.9481019588140704 1.0 13.385999556874806 -5.265899202224357 6.673879270848238 0.9981714779483917 0.9141664314968877 0.029368380987119025 0.080087258772344 0.23385308485950435 68.46855395404974 0.01115109419580126 0.08931422384055855 5.42126700944681e-06 5.265899202224357 -0.08400504645150397 AAAAAATAPPS(ph)PGPAQPGPR ddPTM_A549_PD325901_60min_R1 3 AAAAAATAPPSPGPAQPGPR 20 0 Q6SPF0 Q6SPF0 SAMD1 Atherin 1 AAAAAATAPPS(1)PGPAQPGPR;AAAAAATAPPS(1)PGPAQPGPR;AAAAAAT(0.349)APPS(0.651)PGPAQPGPR 279.12 1.4275999999999996e-126 144581000.0 10407.9 10567.199999999999 10546.7 11811.599999999999 12331.0 10688.2 11180.1 11698.999999999998 12495.5 12949.7 13241.900000000001 True False 11464.502346108984 11457.73502959162 11262.46248445921 12541.175705910084 11464.913099640615 10601.158842861416 11605.564823485469 11465.654267312048 11970.357589271762 12132.053731990374 11613.230247320202 0.9871932358143388 0.9866105110794249 0.9697958487525956 1.0799041643735607 0.9872286052613302 0.9128518609460684 0.999339940423854 0.9872924262358264 1.030751766248152 1.0446752086733055 1.0 13.503481696593429 -8.738191363366724 24.244278889225015 1.0145216675746513 0.988879348616988 0.13779366952280303 0.03806222850540334 317.130709741816 330720.57147607417 0.006426435743083116 0.007284492515556318 1.8272948769897508e-09 8.738191363366724 -0.025642318957663335 AAAAGLGHPAS(ph)PGGSEDGPPGSEEEDAAR ddPTM_A549_MK2206_60min_R1 2 AAAAGLGHPASPGGSEDGPPGSEEEDAAR 29 0 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 AAAAGLGHPAS(1)PGGSEDGPPGSEEEDAAR;AAAAGLGHPAS(1)PGGSEDGPPGSEEEDAAR 175.95 6.946e-58 21395300.0 2280.5 3218.6 2857.7 2305.1 3447.4 3122.5 2761.3 2875.6 4327.6 4124.7 4216.0 True False 2665.3926471280547 3382.412992247876 3262.9648309128556 2869.8496034798723 2940.2920267431646 3452.920877452249 3262.9924671538574 3283.2251061556585 3347.4055097571413 3192.9274052714377 3169.0508443194135 0.8410697013289717 1.0673268301488184 1.0296347364580107 0.9055864813984081 0.9278147215636178 1.0895757269536013 1.0296434571262358 1.0360279047087253 1.0562801527016936 1.0075342940599465 1.0 11.62983509119796 -7.249487474757893 24.94234151320983 1.0321761544196841 0.9620469710817757 0.3096411213360373 0.06044274739564814 834.5667074757199 1741651.2433063425 0.008745696139244108 0.015060057298465757 5.6300535447985955e-08 7.249487474757893 -0.07012918333790841 AAAAGLGHPAS(ph)PGGSEDGPPGSEEEDAAR ddPTM_A549_PD325901_60min_R1 2 AAAAGLGHPASPGGSEDGPPGSEEEDAAR 29 0 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 AAAAGLGHPAS(0.999)PGGS(0.001)EDGPPGSEEEDAAR;AAAAGLGHPAS(1)PGGSEDGPPGSEEEDAAR 178.85 2.8648000000000005e-58 27379000.0 4685.3 5405.3 4951.200000000001 4490.4 4824.9 5067.0 4325.2 5331.7 5908.7 5969.3 6152.6 True False 5160.948206864442 5860.823600901998 5287.218205984281 4767.761809561675 4486.01566900138 5025.736031958495 4489.797852840255 5225.355060862261 5660.377887057743 5592.397379272889 5395.869204544842 0.9564628072373343 1.0861685816931095 0.9798640414654516 0.8835947701523003 0.8313796163225918 0.931404346815043 0.8320805569302124 0.9683991332593902 1.049020588247415 1.0364219678569144 1.0 12.397639662555102 -8.546639091112011 7.5050321250146945 1.0225521343803825 0.9291679573230306 0.29272106807111054 0.06771843263058816 0.18731382609189007 43.152445653250794 0.012422263624421571 0.014183255366566075 2.840278385838466e-09 8.546639091112011 -0.09338417705735191 AAAAGRES(ph)PAAAAAR ddPTM_A549_PD325901_60min_R1 1 AAAAGRESPAAAAAR 15 1 Q8N6I1 Q8N6I1 EID2 EP300-interacting inhibitor of differentiation 2 1 AAAAGRES(1)PAAAAAR 54.964 0.0041665 5750500.0 1690.2 2170.2 1549.0 1954.1 2029.9 2045.8 1743.1 1767.9 1668.4 2127.5 2767.1 True False 1861.7878597405236 2353.0903703175636 1654.1244548936927 2074.8003189169035 1887.3268267748347 2029.1396830828276 1809.4346243609184 1732.6378476092805 1598.2829500172859 1993.1692869185783 2426.7642420921266 0.767189423450325 0.969641108725482 0.6816172853559368 0.8549657535452257 0.7777132998909527 0.8361503140220556 0.7456161554453247 0.7139704045233352 0.6586066014551943 0.8213279445720926 1.0 11.24481824346613 -10.99559667485861 1.2937908369316014 0.9990840699282952 0.7693694996515515 0.13192015221480113 0.09708406790624312 0.3055345104716878 0.9161337346606077 0.06081978056509826 0.014132953481158434 1.010190604959781e-11 10.99559667485861 -0.2297145702767437 AAAAGSLDRS(ph)R ddPTM_A549_MK2206_60min_R1 2 AAAAGSLDRSR 11 1 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 AAAAGSLDRS(1)R;AAAAGSLDRS(1)R 163.99 3.1161e-14 39138000.0 5952.1 6940.700000000001 5734.200000000001 5823.2 5873.1 5773.2 4933.7 5446.7 8072.2 9469.5 9241.2 True False 6956.668965126459 7293.951983873369 6547.395784519189 7249.884261413379 5009.174770048527 6384.116192059995 5830.0894271527895 6218.786404819177 6243.859588654582 7330.333373146628 6946.354995854974 1.0014848030769576 1.0500401992449007 0.9425656748648965 1.0436961925699921 0.7211227720203761 0.9190598804509016 0.8393019692531865 0.8952589391889774 0.8988684846052952 1.05527767836812 1.0 12.762040426691113 AAAAPGAS(ph)PSPGGDAAWSEAGPGPR ddPTM_A549_MK2206_60min_R1 1 AAAAPGASPSPGGDAAWSEAGPGPR 25 0 P52701;P52701-2;P52701-3;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.794)PS(0.206)PGGDAAWSEAGPGPR 114.88 9.277299999999999e-17 3050200.0 629.3 399.03 710.52 313.96 532.57 581.54 550.45 361.62 980.08 717.1 602.8 True False 735.5104550921661 419.3389226050673 811.2824200091687 390.8802140941998 454.22965849121294 643.0781768049904 650.4596398597913 412.8807424148037 758.0934448661562 555.1066119524206 453.10812356635284 1.623255944526138 0.9254720910861347 1.7904830609163975 0.8626643261604635 1.0024752037461448 1.4192598705655706 1.4355506026687654 0.9112190246448798 1.6730961230606618 1.2251084963634098 1.0 8.823711546271207 AAAAPGAS(ph)PSPGGDAAWSEAGPGPR ddPTM_A549_PD325901_60min_R1 2 AAAAPGASPSPGGDAAWSEAGPGPR 25 0 P52701;P52701-2;P52701-3;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.976)PS(0.024)PGGDAAWSEAGPGPR;AAAAPGAS(0.801)PS(0.199)PGGDAAWSEAGPGPR 188.19 3.6069e-57 12066900.0 2358.55 2043.2800000000002 1956.3 2119.8 2095.19 1880.9099999999999 1583.3600000000001 1819.81 2416.8 2137.2200000000003 3144.5 True False 2597.98825972726 2215.4743764917844 2089.0662821875594 2250.7352315849007 1948.0310824131075 1865.5924925737227 1643.6156312478377 1783.512461936673 2315.230300648391 2002.2755644597523 2757.7464346278384 0.9420693023497143 0.8033640615660032 0.757526600689625 0.816150173679271 0.7063851331480361 0.6764916705714051 0.5959995489830615 0.6467282269108836 0.8395370479232745 0.72605499161128 1.0 11.429274096727077 -9.575217055104314 1.1475012567517802 0.9661001330315898 0.7436282062014709 0.0 0.11719282472223061 0.265298476118176 0.7216100540944131 0.027332842489132498 0.01980644047185625 2.659395594001342e-10 9.575217055104314 -0.22247192683011896 AAAAPGAS(ph)PSPGGDAAWSEAGPGPRPLAR ddPTM_A549_PD325901_60min_R1 1 AAAAPGASPSPGGDAAWSEAGPGPRPLAR 29 1 P52701;P52701-2;P52701-3;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.875)PS(0.125)PGGDAAWSEAGPGPRPLAR 272.68 2.742599999999999e-153 134650000.0 4893.9 4208.6 4000.8 4061.3 3614.7 3700.9 4174.4 3811.6 5431.2 5336.3 5740.6 True False 5390.725125301235 4563.273492082988 4272.318346764805 4312.157277118479 3360.81594203803 3670.7610974294857 4333.259076319329 3735.5746478576457 5202.945551506765 4999.365107301347 5034.5425926616535 1.0707477444244393 0.9063928665008044 0.8486010929755831 0.8565142111229483 0.6675513972087064 0.7291151142071943 0.8607056145746955 0.7419888856045467 1.0334495052421595 0.9930127743061343 1.0 12.297644994517787 -8.775434581414764 24.980425296068262 1.0157956201104033 0.8304577023936782 0.3705930347924711 0.10051878223949014 167.08430464352014 298232.36230163695 0.01791691432061427 0.019119755722939898 1.6771249451711512e-09 8.775434581414764 -0.18533791771672503 AAAAPGASPS(ph)PGGDAAWSEAGPGPR ddPTM_A549_MK2206_60min_R1 1 AAAAPGASPSPGGDAAWSEAGPGPR 25 0 P52701;P52701-2;P52701-3;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.405)PS(0.595)PGGDAAWSEAGPGPR 85.087 9.688799999999998e-07 4606500.0 761.86 584.7 457.28 361.71 913.66 717.71 505.33 572.52 1032.9 825.12 662.54 True False 890.443342311326 614.4587325443773 522.1291800678271 450.32896623777873 779.2618243180834 793.6575958226598 597.1419199025308 653.6764632689658 798.9497992023634 638.7248189292721 498.0130328262295 1.7879920476338744 1.2338205870985286 1.0484247311857244 0.9042513680458458 1.5647418299391964 1.5936482451445981 1.1990487809400163 1.3125689895289379 1.6042748814590542 1.2825463930220895 1.0 8.960039687384832 -11.07999927854566 1.4181375290041693 1.0010239988824237 1.3743898837339852 0.05838129753444499 0.26285026217292945 0.5348281087998827 1.9293555837271812 0.18715167096467275 0.041663504145304064 8.317651528381195e-12 11.07999927854566 0.3733658848515615 AAAAPGASPS(ph)PGGDAAWSEAGPGPRPLAR ddPTM_A549_MK2206_60min_R1 2 AAAAPGASPSPGGDAAWSEAGPGPRPLAR 29 1 P52701;P52701-2;P52701-3;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.013)PS(0.987)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.164)PS(0.836)PGGDAAWSEAGPGPRPLAR 313.57 9.868399999999997e-205 182275000.0 7292.1 7621.2 6019.8 5911.9 11267.2 7478.6 7303.5 7719.1 12689.3 11783.9 13715.5 True False 8522.828205271857 8009.086527222862 6873.498159054203 7360.315765395278 9609.809805569585 8269.980488107089 8630.45141196473 8813.306063752309 9815.193810648227 9121.908805726018 10309.562821457052 0.8266915244488829 0.7768599567145309 0.6667109244194673 0.7139309292607854 0.9321258303571236 0.8021659726341618 0.8371306874431546 0.8548670992536542 0.9520475291367442 0.8848007392457808 1.0 13.331695535855035 -8.291827171036875 0.5251538394068821 0.9976103161817305 0.7524779831762297 0.4714957089499482 0.0694504920964812 0.32992324001129414 0.20157034515839772 0.01965200619686176 0.02713772963784164 5.107081976017774e-09 8.291827171036875 -0.24513233300550075 AAAAPGASPS(ph)PGGDAAWSEAGPGPRPLAR ddPTM_A549_PD325901_60min_R1 1 AAAAPGASPSPGGDAAWSEAGPGPRPLAR 29 1 P52701;P52701-2;P52701-3;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.141)PS(0.859)PGGDAAWSEAGPGPRPLAR 267.1 9.383199999999996e-153 125690000.0 5445.0 5778.6 5688.9 4886.3 5013.0 6046.5 5356.7 4618.9 6464.5 6889.0 7946.9 True False 5997.772391602855 6265.582901998464 6074.982964134748 5188.115653407537 4660.90417391115 5997.259308710685 5560.552149798714 4526.772416043046 6192.819545904308 6454.027364315903 6969.481679549679 0.8605765345795975 0.8990027078173343 0.8716549154523744 0.7444048054005012 0.6687590825566682 0.8605029160645111 0.7978429968637207 0.6495134967246998 0.8885624255352725 0.9260412267462791 1.0 12.76683565149485 -9.36009875895144 1.5505887614028366 0.9685067653713796 0.7978081688186498 0.3726954790554635 0.08158822263318537 0.23430830407228637 1.1602134343686028 0.019285518336144673 0.016399312006059652 4.364165794372e-10 9.36009875895144 -0.1706985965527298 AAAFMGT(ph)PQNQTHQQPHVLR ddPTM_A549_MK2206_60min_R1 2 AAAFMGTPQNQTHQQPHVLR 20 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 AAAFMGT(0.97)PQNQT(0.03)HQQPHVLR;AAAFMGT(0.991)PQNQT(0.009)HQQPHVLR 61.222 0.0011251 8327400.0 1706.5 2254.6 1912.6200000000001 2160.6 2430.1000000000004 2001.1799999999998 1631.4499999999998 1998.51 2904.7 2709.2 2970.8999999999996 True False 1994.5154800806931 2369.349509824788 2183.8582758514003 2689.947096993019 2072.635509134005 2212.9435393242247 1927.8633471691455 2281.804912680187 2246.7900878527503 2097.189838378884 2233.1435373312506 0.8931425350581211 1.0609929322574188 0.9779300968988544 1.2045562911767318 0.9281246254376184 0.9909544560529386 0.8632957599640306 1.0217905273599608 1.0061109150815304 0.9391200356449814 1.0 11.124860269338232 AAAFMGT(ph)PQNQTHQQPHVLR ddPTM_A549_PD325901_60min_R1 1 AAAFMGTPQNQTHQQPHVLR 20 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 AAAFMGT(0.99)PQNQT(0.01)HQQPHVLR 53.278 0.0031835 4078300.0 940.24 1229.3 868.88 894.97 1091.4 858.88 1174.1 1202.8 1169.9 1253.3 1341.6 True False 1035.692472631896 1332.8974252287258 927.8474217998914 950.250264275657 1014.7438291255993 851.8855660407569 1218.7810179921714 1178.8092104216535 1120.7331714368402 1174.1664241104831 1176.591705103103 0.8802479807905323 1.1328461856799559 0.7885891238019441 0.8076295797040213 0.8624434667731052 0.7240281929117521 1.0358572244781985 1.0018846854936445 0.952525133889697 0.9979387233633374 1.0 10.200398055153258 -7.8054675292554 24.99999048827349 0.983194610830854 0.8717656402332572 0.30333706083108036 0.09804603968264775 151.6806782540523 86126.49419987 0.015395443865825654 0.021271925679221565 1.5650653295461756e-08 7.8054675292554 -0.11142897059759682 AAAGEEETAAAGS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 AAAGEEETAAAGSPGR 16 0 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 AAAGEEETAAAGS(1)PGR;AAAGEEETAAAGS(1)PGR 116.35 1.6147000000000003e-07 14977600.0 1064.45 1279.83 1408.1 1409.19 1555.25 1287.32 1344.68 1303.69 1776.95 1684.0 1811.3 True False 1244.1031366961001 1344.9678804040884 1607.7897534410151 1754.4416132609438 1326.4747852272174 1423.5433479461424 1588.99095018015 1488.4920498831784 1374.4736622060607 1303.5832304112052 1361.5042206631292 0.9137710466223541 0.9878543598998271 1.1808922286395345 1.2886053429980788 0.9742715190270578 1.0455666066556861 1.1670848507588336 1.0932702427894045 1.0095258180959694 0.9574580898297083 1.0 10.410985739405403 -8.777341111920252 8.448632277921902 1.0044270878282788 1.0866294889956272 0.13609236475151043 0.1010822678045304 0.28385986323541196 114.6361047418525 0.017697955561673414 0.019097683437340862 1.669778589522998e-09 8.777341111920252 0.08220240116734834 AAAGEEETAAAGS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 AAAGEEETAAAGSPGR 16 0 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 AAAGEEETAAAGS(1)PGR;AAAGEEET(0.003)AAAGS(0.997)PGR 144.18 2.5571e-14 19936000.0 2718.8599999999997 2513.2 2263.44 3033.6 3154.4 2731.98 2336.1 2181.98 2866.2 3136.91 3177.2 True False 2994.876665681054 2724.9961840761657 2417.0506495704203 3220.9785821945243 2932.8458260892353 2709.731660665083 2425.0015638629693 2138.4586971698036 2745.74358147899 2938.8449672515903 2786.4245419302183 1.0748098936877855 0.9779544154418408 0.8674380422647568 1.1559539954250047 1.0525480887623777 0.9724762396716444 0.8702914891006224 0.7674561664922911 0.9854003006939325 1.0547010776813597 1.0 11.444199369548734 -7.398006920641192 6.904208523490615 0.9622935591637978 1.0212845355632247 0.13783957039713868 0.09745023556204646 0.5761349202834585 30.177016973698368 0.015156613805721824 0.02427209283840268 3.999383765462128e-08 7.398006920641192 0.058990976399426964 AAAGEEETAAAGS(ph)PGRK ddPTM_A549_MK2206_60min_R1 2 AAAGEEETAAAGSPGRK 17 1 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 AAAGEEETAAAGS(1)PGRK;AAAGEEETAAAGS(1)PGRK 136.96 6.9519e-13 87942000.0 5166.9 5687.1 5452.6 5020.9 6893.5 5710.4 5291.0 5537.8 8832.1 7212.299999999999 7270.7 True False 6038.946401423348 5976.549098431896 6225.860670131726 6251.020725396768 5879.475281764231 6314.670737743258 6252.306212186679 6322.800108801229 6831.6434519655295 5583.036420840105 5465.184528888321 1.104984903895228 1.0935676676314516 1.139185811059546 1.1437895083605336 1.0758054464009437 1.1554359609203775 1.1440247221548925 1.1569234442825584 1.2500297868908665 1.0215641194416827 1.0 12.416054493170002 -5.752960562685872 24.20020929725872 1.127033498553463 1.0992762794957474 0.008338924502924505 0.06571019786115578 621.1179656532848 1772727.2875636746 0.011986160423492525 0.04484411988481595 1.7661981979268953e-06 5.752960562685872 -0.027757219057715554 AAAGEEETAAAGS(ph)PGRK ddPTM_A549_PD325901_60min_R1 2 AAAGEEETAAAGSPGRK 17 1 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 AAAGEEETAAAGS(1)PGRK;AAAGEEETAAAGS(1)PGRK 212.47 2.0855999999999997e-55 121537000.0 15705.5 15395.9 17323.699999999997 16310.1 18855.2 17242.199999999997 17907.3 17905.2 17274.5 17158.0 17081.2 True False 17299.91079822198 16693.366524915753 18499.39045787079 17317.537834075334 17530.87579890874 17101.785239833192 18588.77210075056 17548.066739642334 16548.51283869192 16074.640951797406 14980.320686648132 1.154842487026415 1.1143530818932634 1.2349128463157124 1.1560191664995763 1.1702603813103882 1.1416167649251934 1.2408794504191503 1.1714079495830032 1.104683483407769 1.0730505232858356 1.0 13.87078088773095 -9.574112181098435 0.7748646437452148 1.0135261775127244 1.1741403418159444 0.5968322492426114 0.04172907705153883 0.20377375845055087 0.2621069742856702 0.01404655005369946 0.008647619279136803 2.666169886489013e-10 9.574112181098435 0.16061416430321995 AAAGPLDMS(ph)LPSTPDIK ddPTM_A549_PD325901_60min_R1 1 AAAGPLDMSLPSTPDIK 17 0 K7ELQ4;P17544-4;P17544-2;P17544 K7ELQ4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 AAAGPLDMS(0.52)LPS(0.091)T(0.389)PDIK 55.353 0.0039707 1720100.0 1847.4 2102.3 2310.7 1528.8 1833.0 2334.8 2045.8 2216.0 2138.8 2200.6 2390.7 True False 2034.946688016001 2279.468199022493 2467.5179973678864 1623.2305038432853 1704.2564035067112 2315.7861629004733 2123.6540385047147 2171.800141581631 2048.9136738773504 2061.6537404432547 2096.6590558959365 0.970566331370665 1.0871906868274486 1.1768809003204748 0.774198599089661 0.8128438425476167 1.1045125130804352 1.0128752371697567 1.0358384857444483 0.9772278750403777 0.9833042404513769 1.0 11.033876564141941 -6.164045140911452 22.34221962059685 0.9780483303070211 1.0791063732840158 0.1966425412598366 0.10059533777111289 27.37952324662388 6275.004911997708 0.01393988275569552 0.036881474484589255 6.854169799677819e-07 6.164045140911452 0.10105804297699472 AAAGPLDMSLPST(ph)PDIK ddPTM_A549_MK2206_60min_R1 2 AAAGPLDMSLPSTPDIK 17 0 K7ELQ4;P17544-4;P17544-2;P17544 K7ELQ4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 AAAGPLDMSLPS(0.133)T(0.867)PDIK;AAAGPLDMS(0.003)LPS(0.31)T(0.687)PDIK 95.631 2.9925e-06 3262700.0 1500.0900000000001 2050.75 1546.01 1550.63 3181.9 2141.86 2493.63 2321.4 3895.8999999999996 2890.84 3022.6 True False 1753.2685183206859 2155.124415538537 1765.2574651781445 1930.5344196104254 2713.8467250374433 2368.5102035483983 2946.6902929304597 2650.4655589893405 3013.484870473898 2237.797236224424 2272.0050004838376 0.7716833888778046 0.948556193793407 0.776960202465321 0.8497051807541384 1.194472162015274 1.0424757881448365 1.2969559011986962 1.1665755834273723 1.326354858300117 0.9849437988683437 1.0 11.149750294753492 -6.756975985882566 24.62820476805771 1.1631121809982525 0.840445002870297 0.6320047366928865 0.11240863869112643 51.01839183820516 281505.6438750702 0.01856189021989387 0.03761389825069886 1.7499434482829318e-07 6.756975985882566 -0.32266717812795553 AAAGPLDMSLPST(ph)PDIK ddPTM_A549_PD325901_60min_R1 3 AAAGPLDMSLPSTPDIK 17 0 K7ELQ4;P17544-4;P17544-2;P17544 K7ELQ4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 AAAGPLDMSLPS(0.156)T(0.844)PDIK;AAAGPLDMS(0.005)LPS(0.163)T(0.831)PDIK;AAAGPLDMS(0.001)LPS(0.106)T(0.893)PDIK 105.03 1.3e-08 7507400.0 4002.2400000000002 4299.7 4576.9 4977.6 5225.0 5436.4 4174.7 5324.4 4285.0 5195.5 5564.8 True False 4408.544458506637 4662.050808798464 4887.515957135535 5285.055047050195 4858.014025271445 5392.127760832676 4333.570492983493 5218.200665089006 4104.916351488892 4867.455243330421 4880.364878173638 0.9033227163450187 0.9552668550764438 1.001465275474356 1.0829221131982252 0.9954202496206476 1.104861602653479 0.8879603474659111 1.0692234690127913 0.8411084937208754 0.9973547808072808 1.0 12.2527732988955 -8.754201030906838 24.99993509566855 0.9249678990853679 1.0009741352770962 0.07175213955700499 0.07657219386733084 235.61998027253728 813787.9140889444 0.01397866222871243 0.015692588098658193 1.7611606327022879e-09 8.754201030906838 0.0760062361917283 AAAGVGGS(ph)LR ddPTM_A549_MK2206_60min_R1 2 AAAGVGGSLR 10 0 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 1 AAAGVGGS(1)LR;AAAGVGGS(1)LR 140.49 6.1689e-08 64236000.0 9351.8 9136.1 8969.599999999999 8386.400000000001 10841.1 9266.0 8427.7 8506.1 12631.400000000001 13135.4 12488.0 True False 10930.15521044162 9601.088466561807 10241.624154864377 10441.068376479809 9246.388551118333 10246.521969727 9958.904000084232 9711.865723838731 9770.408068200926 10168.1040170685 9386.884948733596 1.1644070711568943 1.0228194463869624 1.091056746812061 1.112303861558294 0.9850326920610423 1.0915785189323515 1.0609381125341064 1.0346207263517146 1.0408573367588865 1.0832245279026562 1.0 13.196430761538654 -2.0000000193195193 0.08889132924644569 0.9588190263215752 1.359128359611914 0.11943327196308784 0.04707772181132519 100.58926012445401 0.6248788921485716 0.3662288533981172 4.924938774826939 0.009999999555151637 2.0000000193195193 0.4003093332903387 AAAGVGGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 AAAGVGGSLR 10 0 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 1 AAAGVGGS(1)LR;AAAGVGGS(1)LR 136.96 4.7028999999999996e-07 84574000.0 10960.1 10740.7 11919.3 10829.8 12339.7 12650.4 12439.599999999999 12252.1 13251.7 12521.8 13951.5 True False 12072.761283600828 11645.85648348993 12728.215374573525 11498.732149739666 11473.002041653983 12547.379336626753 12912.995785210314 12007.722253913487 12694.777133028094 11731.171411016243 12235.55394584523 0.9866951130316679 0.9518045962638626 1.040264742479893 0.939780266642054 0.937677369772851 1.0254851878518674 1.0553666668761752 0.9813795359866722 1.0375318673118843 0.9587773028453479 1.0 13.578791798239564 -7.285636860775852 24.79736421163504 1.0187294597686216 0.9722508791710875 0.19607639191710358 0.03641149571471134 619.4533430236091 634808.919429027 0.004731844798090208 0.007567094641908929 5.1803981453894624e-08 7.285636860775852 -0.04647858059753407 AAAPS(ph)PDRR ddPTM_A549_MK2206_60min_R1 2 AAAPSPDRR 9 1 Q9UL51 Q9UL51 HCN2 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 1 AAAPS(1)PDRR;AAAPS(1)PDRR 77.288 0.00080505 28818000.0 1293.77 1452.58 1450.1100000000001 1404.1799999999998 1723.6799999999998 1505.77 1225.98 1222.46 1800.1499999999999 1960.9900000000002 1606.94 True False 1512.126746360386 1526.5101175291793 1655.757403140652 1748.2041630360366 1470.128955345089 1665.1095819507686 1448.7246966578375 1395.7474486267374 1392.4188992488469 1518.000997033296 1207.892448712201 1.2518720089462811 1.263779833342508 1.3707821461305962 1.4473177350350115 1.2171025300410416 1.378524705346102 1.1993821951634855 1.1555229524903634 1.1527672854759374 1.2567352322234635 1.0 10.238276286827341 -8.84417178806872 0.4969453024302811 1.0164819947878296 1.3348894762536998 0.30904989124192894 0.09851796730581283 0.293270048022328 0.17241001216265195 0.029622574284299538 0.026608123020876243 1.4316214998603034e-09 8.84417178806872 0.31840748146587017 AAAPS(ph)PDRR ddPTM_A549_PD325901_60min_R1 3 AAAPSPDRR 9 1 Q9UL51 Q9UL51 HCN2 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 1 AAAPS(1)PDRR;AAAPS(1)PDRR;AAAPS(1)PDRR 79.311 0.00073742 31131800.0 2215.02 2023.2199999999998 1676.2099999999998 1877.31 2381.46 1849.4299999999998 1864.1 1675.7 1893.4699999999998 2257.0 2276.0 True False 2439.8871997884585 2193.723849891206 1789.9676904695646 1993.2671750196466 2214.194465190994 1834.3688552565613 1935.0393455746598 1642.2768489387806 1813.894040619294 2114.49263481797 1996.0664287527309 1.2223476957693513 1.0990234685034928 0.896747555434841 0.9985976149426884 1.1092789464800343 0.9189918876611695 0.9694263265495604 0.822756610342362 0.9087343058781516 1.0593297920146072 1.0 10.962944018782856 -7.271558542747018 24.591107891891458 0.9433942677712812 1.054019693992748 0.2844148664086461 0.09287946035916955 599.04722428296 1455774.5633150465 0.013684666382566827 0.022032210904679574 5.3510801653249346e-08 7.271558542747018 0.11062542622146676 AAAS(ph)PPTPIR ddPTM_A549_MK2206_60min_R1 2 AAASPPTPIR 10 0 Q5T2Z1;Q6PGN9-2;Q6PGN9-4 Q5T2Z1 PSRC1 Proline/serine-rich coiled-coil protein 1 1 AAAS(0.914)PPT(0.086)PIR;AAAS(0.988)PPT(0.012)PIR 119.22 6.0201e-05 13687000.0 3438.3 3403.4 3107.7 3126.0 4261.6 3421.9 2860.1000000000004 3588.8 4303.4 5206.8 4809.200000000001 True False 4018.600981635776 3576.6185229032553 3548.4185901346814 3891.8701403314703 3634.7242853073844 3784.0031867266134 3379.743148265946 4097.523390239055 3328.6867711176815 4030.5802637203506 3614.9429128322904 1.1116637464372077 0.9893983415912346 0.9815974071232324 1.07660625193171 1.0054721119951506 1.0467670660286763 0.934936797001293 1.133496016131736 0.9208130948075391 1.1149775697460214 1.0 11.819757148982585 AAAS(ph)PPTPIR ddPTM_A549_PD325901_60min_R1 2 AAASPPTPIR 10 0 Q5T2Z1;Q6PGN9-2;Q6PGN9-4 Q5T2Z1 PSRC1 Proline/serine-rich coiled-coil protein 1 1 AAAS(0.999)PPT(0.001)PIR;AAAS(0.871)PPT(0.129)PIR 85.958 0.00079716 19238300.0 6285.799999999999 7085.200000000001 5807.9 6169.0 6630.7 6842.299999999999 6514.1 7192.0 6944.200000000001 7140.7 8012.1 True False 6923.929788638613 7682.294669511567 6202.059019739882 6550.045119184477 6164.982506673185 6786.578577357336 6761.997640152299 7048.549917985149 6652.359423105992 6689.834983360514 7026.662492886534 0.9853795874852502 1.093306342419145 0.8826464948357144 0.9321701626932327 0.8773699480961731 0.9658324395440584 0.9623342016210158 1.003114910545479 0.9467310305341308 0.9520643677041543 1.0 12.778623888854604 -10.956212758909507 0.9252709405309346 1.0030737543906474 0.959376987621167 0.0 0.0574241423011857 1.7605701101104816 2.343975716764734 0.0569357535668761 0.009918635106432781 1.1060817867448122e-11 10.956212758909507 -0.04369676676948042 AAAT(ph)PAKK ddPTM_A549_MK2206_60min_R1 3 AAATPAKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AAAT(1)PAKK;AAAT(1)PAKK;AAAT(1)PAKK 68.893 0.0045225000000000005 126795500.0 34576.35 25384.9 22236.95 15046.97 19991.78 23655.97 21374.469999999998 25412.76 20854.9 41222.3 41933.5 True False 40411.99256940411 26676.882982325587 25390.48388451119 18733.478325484157 17051.015644950832 26159.229043837982 25257.934523378903 29015.096553313488 16131.298448431962 31910.153799869262 31520.254644276145 1.2820960054249637 0.8463409729200878 0.8055291485128253 0.5943314397964746 0.5409542479076125 0.8299180745542711 0.8013239362571446 0.9205222762558621 0.5117756385690015 1.012369797134996 1.0 14.943991569564247 -5.209753265380741 2.3024118133544773 0.756364710802252 1.4563395389579732 0.43113225325232685 0.16347669244952948 0.5784140927084821 3.1716364028121435 0.026413708223153805 0.8534525547631806 6.16945405939079e-06 5.209753265380741 0.6999748281557212 AAAT(ph)PAKK ddPTM_A549_PD325901_60min_R1 3 AAATPAKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AAAT(1)PAKK;AAAT(1)PAKK;AAAT(1)PAKK 81.594 0.0036178000000000004 142905600.0 40528.8 40138.4 39830.9 38040.0 38986.4 30806.8 29090.6 32004.25 35960.4 45285.4 53151.6 True False 44643.25394027438 43521.00383372707 42534.064396659276 40389.64440489177 36248.12975977853 30555.919634761987 30197.65870198714 31365.90012690158 34449.109443659545 42426.072115545285 46614.29015575295 0.9577160521185087 0.9336408146152126 0.9124683493954244 0.8664648602378651 0.7776184006806104 0.655505415456614 0.647819769454545 0.6728816425627909 0.7390246494916961 0.9101516289057816 1.0 15.50848467727076 -6.318260161170638 2.5021531679417146 0.8183395500634755 0.9401171465324623 0.24980011403914826 0.1075359881907576 0.5290996273705175 6.434121074883692 0.02107757838641191 0.059814816176328875 4.805513911497886e-07 6.318260161170638 0.12177759646898678 AAAT(ph)PESQEPQAK ddPTM_A549_MK2206_60min_R1 2 AAATPESQEPQAK 13 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 AAAT(0.992)PES(0.008)QEPQAK;AAAT(0.997)PES(0.003)QEPQAK 226.23 3.9799e-46 98199000.0 14572.8 16544.4 17375.1 15273.6 20598.0 15963.300000000001 16022.4 14418.7 21904.0 22020.0 22894.0 True False 17032.33236924697 17386.439293154097 19839.150447420634 19015.632685657958 17568.061486005594 17652.525810419065 18933.46268269511 16462.59488041681 16942.77897350042 17045.666706445816 17208.787957743993 0.9897461931118969 1.0103232915558218 1.1528499564371104 1.1049954669876028 1.0208773290218809 1.0257855378173446 1.1002205808558998 0.9566388359738378 0.9845422591703288 0.9905210493790313 1.0 14.070857869203612 -8.265613164485424 24.99591575021812 0.9897919294395277 1.0588164095755028 0.3740328683637232 0.046292778027726626 323.02217571043803 1934508.4268626054 0.007737468502389268 0.009519521684372896 5.424838774219001e-09 8.265613164485424 0.06902448013597517 AAAT(ph)PESQEPQAK ddPTM_A549_PD325901_60min_R1 2 AAATPESQEPQAK 13 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 AAAT(1)PESQEPQAK;AAAT(1)PESQEPQAK 248.76 1.5046999999999995e-68 141704000.0 24387.9 25727.0 29877.0 28852.0 33557.0 30036.0 29663.0 27922.0 28392.0 30066.0 32602.0 True False 26863.741654576927 27895.10457891435 31904.63288499604 30634.122512353773 31200.072085365337 29791.39677440406 30791.84169721644 27365.073805614757 27198.782975839604 28167.627628904356 28592.160681105684 0.9395491986140476 0.9756207266052487 1.115852461828088 1.0714168423304036 1.091210714480316 1.0419428285491854 1.0769330111370126 0.9570831008828999 0.9512671420391515 0.9851521171507032 1.0 14.803332026665405 -8.267108582651023 24.946932396025844 0.9748514458464345 1.047446958857693 0.3269965987552138 0.04906422559729381 419.48687884495973 1845919.9276292666 0.00852674021862011 0.0104620407932662 5.40619140020589e-09 8.267108582651023 0.07259551301125844 AAAT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 AAATPKK 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2;S4R349;S4R3C2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAAT(1)PKK 43.808 0.052904 12563000.0 3782.4 3209.3 3022.9 2864.6 2961.7 1953.6 2076.8 2306.7 2437.2 3107.5 4062.2 True False 4166.386463544288 3479.758974039329 3228.0521721743976 3041.5398360213712 2753.680409310324 1937.6905293140144 2155.8337604685676 2260.6910589288555 2334.772959591303 2911.291919670733 3562.5751524074435 1.1694873189492756 0.9767538438277855 0.9061007934086699 0.8537475578489965 0.7729466162838695 0.5439016572056317 0.6051335531860269 0.6345665599225808 0.6553610407386237 0.8171875104735405 1.0 11.798704732752988 -5.5152859050946645 1.1179750888550972 0.7770883446466924 1.2487642900879985 0.5277845905126091 0.12656092530182292 1.0380531284239414 1.3871541393422626 0.025992598437758505 0.5135135040285339 3.0529106569120924e-06 5.5152859050946645 0.4716759454413061 AAAT(ph)TPTK ddPTM_A549_PD325901_60min_R1 1 AAATTPTK 8 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AAAT(0.495)T(0.495)PT(0.01)K 81.915 0.0038506 29899000.0 5919.0 5362.7 5072.4 4450.5 6038.0 4802.3 4102.8 4424.7 5370.7 6235.4 8203.6 True False 6519.8925226625 5814.633549397287 5416.643566819086 4725.397277181151 5613.911709969186 4763.19166099749 4258.934299138307 4336.445887389998 5144.9881561123475 5841.695779859978 7194.609206905057 0.9062191336820636 0.8081931043338209 0.7528753002484748 0.6567969352172639 0.7802941825639688 0.6620500883391965 0.5919618670949878 0.6027354318602982 0.7151171117361625 0.8119545637382758 1.0 12.812700610186134 -10.497462821452348 0.8977846158939381 0.9939145444880881 0.7164354050230128 0.27328753145096163 0.10256274671247197 0.33401506893608285 0.4981520649503818 0.05693244325272287 0.017807513352447204 3.180805975198821e-11 10.497462821452348 -0.2774791394650753 AAATGNAS(ph)PGKLEHSK ddPTM_A549_MK2206_60min_R1 4 AAATGNASPGKLEHSK 16 1 H0Y6H0;Q8NB78 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 AAAT(0.012)GNAS(0.988)PGKLEHSK;AAATGNAS(0.999)PGKLEHS(0.001)K;AAATGNAS(1)PGKLEHSK;AAATGNAS(1)PGKLEHSK 167.05 4.8182e-22 231931000.0 14816.3 16774.2 14562.7 13966.800000000001 20958.600000000002 15209.699999999999 14728.0 15867.8 23750.6 23794.5 24304.9 True False 17316.92921624354 17627.93513159894 16627.909837678766 17388.666626993487 17875.617703689542 16819.18035861824 17403.886957680083 18117.10924309945 18371.12702191466 18419.305924002038 18269.322548884942 0.9478692584197913 0.9648926545814832 0.9101547029555095 0.95179591801858 0.9784499483140698 0.9206241946636816 0.9526290266708505 0.9916683661707653 1.0055724273714755 1.008209575079523 1.0 14.157135517429206 -8.296859155558629 3.341056331617724 1.0024526112917613 0.9459225379375029 0.6928417297368641 0.017686524012267325 0.10008228493105736 2.306163136918846 0.0028101919104024896 0.003510527648155588 5.0482498894895265e-09 8.296859155558629 -0.056530073354258414 AAATGNAS(ph)PGKLEHSK ddPTM_A549_PD325901_60min_R1 4 AAATGNASPGKLEHSK 16 1 H0Y6H0;Q8NB78 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 AAAT(0.001)GNAS(0.999)PGKLEHSK;AAAT(0.004)GNAS(0.996)PGKLEHSK;AAATGNAS(1)PGKLEHSK;AAAT(0.002)GNAS(0.998)PGKLEHSK 201.61 7.9237e-40 281699000.0 20875.1 22093.5 23235.9 20925.2 25466.5 24638.0 24713.0 23434.3 24014.9 24988.1 26367.2 True False 22994.324784563603 23955.396782144988 24812.827902817524 22217.702079422765 23677.82089465557 24437.356296702877 25653.4667384725 22966.884502647295 23005.63726706432 23410.34710150417 23124.201555452124 0.9943835132825203 1.0359448184491753 1.0730242012168962 0.9607986691408323 1.0239411223724142 1.0567870305965719 1.1093774060460062 0.9931968655251694 0.9948727186059383 1.012374288702071 1.0 14.497115931908072 AAATPES(ph)QEPQAK ddPTM_A549_MK2206_60min_R1 2 AAATPESQEPQAK 13 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 AAAT(0.013)PES(0.987)QEPQAK;AAAT(0.001)PES(0.999)QEPQAK 150.12 8.262299999999999e-13 7022700.0 2539.8999999999996 3022.8 2415.4 2436.5 3882.7999999999997 2807.1 2865.8 2764.5 3985.8999999999996 4277.1 4542.8 True False 2968.5730254069476 3176.647608577293 2757.9400400975983 3033.4426093786424 3311.6452635140563 3104.145458797826 3386.47876448395 3156.3763409261796 3083.1000141743652 3310.9001394250395 3414.697385098252 0.8693517142578454 0.9302867136748899 0.8076674823758191 0.8883488834520428 0.9698210090200333 0.9090543344614737 0.9917361284377795 0.924350238091555 0.9028911398207704 0.969602798149498 1.0 11.737542015340654 -14.999999999999998 0.10459298672780429 1.2761885313648285 0.8506423922230932 0.3742655272919988 0.043354652420814516 81.50409467154775 0.6089082293303185 4.994719149985754 0.27064102055825057 1.000000000000004e-15 14.999999999999998 -0.4255461391417352 AAATPES(ph)QEPQAK ddPTM_A549_PD325901_60min_R1 1 AAATPESQEPQAK 13 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 AAAT(0.002)PES(0.998)QEPQAK 159.08 1.7097e-18 4647500.0 2515.7 2748.8 2302.4 2233.2 2769.9 3177.5 2609.2 2424.6 2362.2 2932.8 3007.0 True False 2771.092012039544 2980.451022914439 2458.654709455933 2371.1396920348143 2575.351779636244 3151.6234934967656 2708.4945338090242 2376.239450938095 2262.924948771777 2747.6225074852196 2637.158062943526 1.0507872284858513 1.1301753447374854 0.9323122280776933 0.8991268765241212 0.9765632996460228 1.1950832745986437 1.027050510118409 0.9010606851095605 0.858092270072716 1.0418876843576057 1.0 11.364768329050278 -8.249536495856018 22.478036021016447 0.9287210741149182 1.0294829946364517 0.13667213008179524 0.09090377219753809 243.99952338899433 460780.306380965 0.015443950035109861 0.019834786549178213 5.629418086962822e-09 8.249536495856018 0.10076192052153343 AAATT(ph)PTK ddPTM_A549_MK2206_60min_R1 2 AAATTPTK 8 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AAAT(0.083)T(0.912)PT(0.005)K;AAAT(0.152)T(0.829)PT(0.019)K 102.07 0.0023808 45351000.0 5736.9 5081.7 3872.5 3063.3999999999996 4301.7 3460.8 4008.1 3944.6 4190.2 6855.1 6483.0 True False 6705.148466261316 5340.336824304369 4421.678730346092 3813.9331375212505 3668.9256284275343 3827.019558906886 4736.319888313252 4503.759129830857 3241.126390374427 5306.528148926284 4873.092178302366 1.3759535467267072 1.0958825790495874 0.9073661175616152 0.782651548128504 0.7528947728022813 0.7853369932025585 0.9719331617411019 0.9242097142927075 0.6651067272656301 1.088944751046124 1.0 12.25062179714141 -5.4498611533545835 1.7742988172568646 0.8402126650436987 1.448104055122099 0.6073002600967758 0.1197552177066557 0.30274398679266834 1.2499656214813921 0.01816450289854403 0.27090171049200323 3.5492684341465216e-06 5.4498611533545835 0.6078913900784002 AAATT(ph)PTK ddPTM_A549_PD325901_60min_R1 1 AAATTPTK 8 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AAAT(0.025)T(0.969)PT(0.006)K 74.376 0.0053377 31329000.0 4687.0 3724.0 3688.6 3544.4 4609.1 3300.8 3262.4 3484.8 3388.5 4079.9 5521.3 True False 5162.820789612967 4037.8345493791385 3938.930577353697 3763.3295380835552 4285.372716531793 3273.9193791767525 3386.5524172537803 3415.292930227287 3246.093128826164 3822.2944177199115 4842.215102404416 1.066210542164753 0.8338816975260227 0.8134563405491445 0.777191731159333 0.8850025506722903 0.6761201867201394 0.6993808299784489 0.7053162360613459 0.6703735914611284 0.7893689844182965 1.0 12.241451453275952 -5.253542640219058 3.514474823861481 0.8082074723458917 1.0995825211380326 0.39487307949108263 0.09672389707240117 0.3554672514427216 7.506717241067849 0.01851057145053436 0.2761202607567243 5.577728357914101e-06 5.253542640219058 0.2913750487921408 AAAYDIS(ph)EDEED ddPTM_A549_MK2206_60min_R1 2 AAAYDISEDEED 12 0 P49585 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 AAAYDIS(1)EDEED;AAAYDIS(1)EDEED 129.7 7.7791e-08 32411000.0 1384.98 1593.62 1217.85 1375.0 1732.2 1376.8899999999999 1250.1999999999998 1135.8400000000001 1822.0500000000002 1408.4 1903.27 True False 1618.7307644899847 1674.7284510986321 1390.559442673206 1711.8750617260946 1477.3956746314639 1522.5915858943881 1477.34515714908 1296.8487983641135 1409.3585842159614 1090.2414618237187 1430.6355314202583 1.1314766961526501 1.1706185218509508 0.9719872127688126 1.1965836330282087 1.03268487478763 1.0642763670093114 1.0326495635701505 0.9064844049250416 0.9851276256342003 0.7620679326630351 1.0 10.482440462676763 -7.484613373962913 1.370431399978383 0.9867529304745414 1.1083743568551905 0.3848683793457415 0.0921369924704406 0.27872920423931263 1.0423343520686408 0.009564156034439985 0.017324776085819265 3.276322361976544e-08 7.484613373962913 0.1216214263806491 AAAYDIS(ph)EDEED ddPTM_A549_PD325901_60min_R1 2 AAAYDISEDEED 12 0 P49585 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 AAAYDIS(1)EDEED;AAAYDIS(1)EDEED 134.59 4.2753e-08 65976000.0 1889.2 1849.58 1569.02 1951.73 1954.04 1961.7 1579.95 2010.44 2430.1 1952.43 2046.09 True False 2080.9901932444654 2005.4505977015754 1675.503132483733 2072.283929399564 1816.7949714720423 1945.7245655995625 1640.0758618318143 1970.3401970403297 2327.9713479003885 1829.1532365962114 1794.4339012331623 1.1596917511502527 1.1175951347794975 0.9337224019966975 1.154839934742349 1.0124613507488425 1.0843110823209654 0.9139795345511079 1.098028852267159 1.2973291166091832 1.0193483501059524 1.0 10.80931306648455 -8.522485084019372 24.99977551898751 1.1434198107204212 1.051597920514446 0.01647887964667838 0.10522061065330594 25.956395165975948 1648433.260764607 0.02108825808077352 0.024038348413720073 3.0027205484722966e-09 8.522485084019372 -0.09182189020597531 AADDPENGERES(ph)HTPVSIQEEIVGDFK ddPTM_A549_MK2206_60min_R1 1 AADDPENGERESHTPVSIQEEIVGDFK 27 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;A0A0A0MR81;F5H176 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 AADDPENGERES(0.538)HT(0.455)PVS(0.007)IQEEIVGDFK 84.337 6.5334e-07 1990700.0 490.05 351.41 485.5 517.02 924.22 509.24 521.67 308.27 781.39 715.84 681.24 True False 572.7584594278022 369.29526800653287 554.3512004087869 643.6899232099094 788.2684623068312 563.127438793846 616.4506863941455 351.9682165372811 604.4064126234241 554.1312468275286 512.0693067324856 1.1185174582764472 0.7211821977048498 1.082570646434761 1.2570367228555348 1.5393784629209128 1.0997094170458337 1.2038422890989453 0.6873448806826372 1.18032150077524 1.0821411077407475 1.0 9.000195276782055 -11.126273918275889 1.4284228014664377 0.9990262845936586 1.1073991947523145 0.00392099367319465 0.22482810468292005 1.6636101585044432 5.98238407230996 0.17424374909494425 0.03604577273922465 7.47697763722561e-12 11.126273918275889 0.10837291015865591 AADDPENGERES(ph)HTPVSIQEEIVGDFK ddPTM_A549_PD325901_60min_R1 2 AADDPENGERESHTPVSIQEEIVGDFK 27 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;A0A0A0MR81;F5H176 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 AADDPENGERES(0.547)HT(0.435)PVS(0.017)IQEEIVGDFK;AADDPENGERES(0.496)HT(0.434)PVS(0.071)IQEEIVGDFK 100.36 1.3291e-12 12136600.0 1273.54 1485.53 1204.6799999999998 1463.17 1041.83 1278.42 1588.1799999999998 1360.29 1374.33 1399.52 1627.9899999999998 True False 1402.8288432694035 1610.7208265679883 1286.436829129331 1553.5466877998292 968.6554549183833 1268.0089713787997 1648.6190589854432 1333.1579488231387 1316.5716894613142 1311.154068356422 1427.7575506788917 0.9825399575735847 1.1281473005007738 0.9010191040612159 1.0881025893094562 0.6784453386065389 0.8881122504138519 1.1546911856298943 0.9337425308584281 0.9221255309315582 0.9183310343783331 1.0 10.479535298952154 -5.768163958400109 24.992537306510872 0.9545615422026876 1.0553436326190502 0.11052293887513764 0.11941948636439308 241.88021873135767 898986.7309983654 0.015654714956302065 0.05031316332869771 1.7054384164109559e-06 5.768163958400109 0.10078209041636255 AADDPENGERESHT(ph)PVSIQEEIVGDFK ddPTM_A549_MK2206_60min_R1 1 AADDPENGERESHTPVSIQEEIVGDFK 27 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;A0A0A0MR81;F5H176 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 AADDPENGERES(0.193)HT(0.8)PVS(0.007)IQEEIVGDFK 71.472 6.17e-05 2803200.0 382.86 560.59 467.69 365.56 577.11 543.33 499.62 335.48 594.7 714.98 757.48 True False 447.4774079716931 589.1216365265138 534.0154746018245 455.1222164106117 492.21788349299436 600.8248199667356 590.3944868139681 383.03531736441084 460.00139954075485 553.4655214248244 569.3768106155294 0.7859073282031701 1.0346779593809574 0.9378946677236868 0.7993339523585412 0.864485300974724 1.0552323325518107 1.0369134741819173 0.6727272874888027 0.8079032917471062 0.9720549047764977 1.0 9.153239926460024 AADEEAFEDNSEEYIR ddPTM_A549_MK2206_60min_R1 2 AADEEAFEDNSEEYIR 16 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 ; 122.51 1.9223e-07 1628180.0 1022.77 759.14 1261.27 865.45 1359.0500000000002 985.86 998.82 1087.93 1329.6 1053.46 977.03 False True 1195.3885716742648 797.776983450895 1440.1370515748517 1077.4852888515275 1159.1355453226486 1090.1830508390951 1180.2926650645054 1242.1474091458922 1028.4477229349038 815.482654340255 734.4064863437846 1.6276933740406656 1.0862880411399933 1.9609536113229615 1.4671511062160518 1.5783296673935463 1.4844409344292844 1.6071381271978527 1.6913622527081382 1.400379411209986 1.1103968571956724 1.0 9.520434990594374 -9.943872466873788 0.7135063164419256 1.0208464074376615 1.5567729304352476 0.46661476295561377 0.20250944161663367 0.3657208270711753 0.37883956961146825 0.09426973159775896 0.041310212288670316 1.1379614058155377e-10 9.943872466873788 0.535926522997586 AADEEAFEDNSEEYIR ddPTM_A549_PD325901_60min_R1 2 AADEEAFEDNSEEYIR 16 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 ; 144.47 6.8743e-14 2041700.0 1059.88 1076.04 970.86 879.35 863.13 999.27 1215.1299999999999 993.7900000000001 1175.8200000000002 1120.54 1116.24 False True 1167.4782373575833 1166.7216671627089 1036.7483978554485 933.6654523512506 802.5067264368506 991.132276426913 1261.37243709465 973.9680788368274 1126.4043744241942 1049.7889131674467 978.9495564283607 1.1925826307302885 1.1918097919359845 1.0590416953024255 0.9537421476114393 0.8197631033868066 1.0124446861623804 1.2884958461973184 0.9949114052314321 1.1506255526932498 1.0723626220308422 1.0 9.935090711947318 -14.998485576096574 0.005158160963874838 4.933589591195834e-05 2.059141732736624 0.015962023067724984 0.12480181102580691 205435.13807199127 82.61012827551791 17784.082763148002 15282.528194531389 1.00349317687572e-15 14.998485576096574 2.059092396840712 AADGGERPLAAS(ph)PPGTVK ddPTM_A549_MK2206_60min_R1 2 AADGGERPLAASPPGTVK 18 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 AADGGERPLAAS(0.991)PPGT(0.009)VK;AADGGERPLAAS(0.995)PPGT(0.005)VK 105.22 1.5029999999999999e-09 45093000.0 11968.0 14059.1 13730.4 12115.6 19544.1 15018.1 13830.5 13737.599999999999 21761.0 20589.8 21181.8 True False 13987.90581049268 14774.648138728666 15677.577182477462 15083.922543889954 16669.18877991272 16607.30537379203 16343.322825108264 15684.946869635543 16832.16824517633 15938.549879762855 15921.774472059995 0.8785393760625787 0.9279523563567402 0.9846626837975216 0.9473769754972771 1.0469429025743526 1.043056187169026 1.0264762168179191 0.9851255522529826 1.0571791652189222 1.001053614201878 1.0 13.958713511874441 -5.533450038751074 0.7751558148907984 1.02626038741151 0.8272306831896759 0.7206885191241932 0.02771894011351757 0.7388412339506015 0.39811058450182096 0.004752845283574178 0.11632909556999343 2.927857672821995e-06 5.533450038751074 -0.19902970422183408 AADGGERPLAAS(ph)PPGTVK ddPTM_A549_PD325901_60min_R1 2 AADGGERPLAASPPGTVK 18 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 AADGGERPLAAS(0.949)PPGT(0.051)VK;AADGGERPLAAS(0.947)PPGT(0.053)VK 103.02 1.8494000000000003e-09 88866000.0 12304.599999999999 13359.0 12724.900000000001 13362.1 14783.9 14625.3 13725.0 14309.8 15623.400000000001 13301.4 15976.5 True False 13553.75393383223 14484.809813414584 13588.488235039858 14187.446569469104 13745.529865686229 14506.196405802759 14247.312385608187 14024.37981317907 14966.802829837015 12461.547333968876 14011.491783377867 0.9673312551852143 1.0337807021089807 0.969810241844496 1.0125578909663264 0.9810183011342765 1.035307062950411 1.0168305135438953 1.000919818531849 1.0681805378919362 0.8893804832938829 1.0 13.774322945161654 -7.269801349841035 24.40638623705203 1.0292535880308982 0.9949802225516313 0.0 0.04893105152809885 504.12604965458064 1471408.7828031674 0.004430433696095482 0.007153476263433671 5.372774956789183e-08 7.269801349841035 -0.03427336547926685 AADIS(ph)LDNLVEGK ddPTM_A549_MK2206_60min_R1 1 AADISLDNLVEGK 13 0 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 AADIS(1)LDNLVEGK 157.38 2.0571000000000004e-18 2979300.0 1646.3 1669.7 1965.0 1435.3 1994.0 1720.8 1950.0 2008.1 2367.3 2556.0 2387.0 True False 1924.1551918293849 1754.6805981346793 2243.6665474835554 1786.948564433065 1700.6852414358275 1902.8939138254061 2304.2897587911566 2292.75432454833 1831.1103298012933 1978.5978247809053 1794.2420221514337 1.072405599731844 0.9779508987481426 1.2504815514203749 0.9959350758546925 0.9478572123712583 1.0605558728045452 1.2842691957621952 1.2778400551555145 1.0205481240516547 1.102748570345273 1.0 10.809158790642522 -8.964975108652506 24.996780500069637 1.0090651601337735 1.1067913888534104 0.044735364153544954 0.11588819510559334 267.89484819710816 191193.97285772528 0.020415276521498323 0.021645470109157943 1.0839890404717963e-09 8.964975108652506 0.09772622871963699 AADIS(ph)LDNLVEGK ddPTM_A549_PD325901_60min_R1 2 AADISLDNLVEGK 13 0 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 AADIS(1)LDNLVEGK;AADIS(1)LDNLVEGK 172.1 9.7385e-22 10581400.0 4272.3 4860.6 4892.2 4529.2 5145.5 5017.3 5317.8 4562.3 5129.2 4875.5 5076.700000000001 True False 4706.020750898969 5270.2198202771815 5224.21411118846 4808.958397440479 4784.097831011336 4976.4407722805145 5520.171789011819 4471.301347444887 4913.637561273475 4567.6600979419645 4452.298083852808 1.0569869003080317 1.1837077664208373 1.1733747410433204 1.0801070159433335 1.074523255386217 1.1177240783425124 1.239847756158079 1.0042681921188068 1.103618281779877 1.025910667236666 1.0 12.120334469817262 -10.779000914895487 0.3404919991423221 0.9518099782021086 1.1307589853591264 0.30207570652922444 0.06153461439950753 2.6780347164226646 0.37941983333506263 0.181127111513875 0.023849481223993406 1.6634091461876672e-11 10.779000914895487 0.1789490071570179 AADIS(ph)LDNLVEGKR ddPTM_A549_PD325901_60min_R1 2 AADISLDNLVEGKR 14 1 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 AADIS(1)LDNLVEGKR;AADIS(1)LDNLVEGKR 90.37899999999999 2.8903e-05 7171900.0 2056.56 2480.1 2454.1 2599.3 2783.8 2933.6 3156.1000000000004 3225.9 2677.7 2196.4 3144.6 True False 2265.340457240546 2689.106730911707 2620.6499837021374 2759.8528575613896 2588.275491588641 2909.7097342319794 3276.2071125841894 3161.5568938304077 2565.1655809525805 2057.7189291600307 2757.83413526179 0.8214201239573484 0.9750792103588352 0.9502565619137098 1.0007319955445428 0.9385174614001748 1.0550706066867117 1.1879637976390456 1.146391239925056 0.9301377295154408 0.7461358545279954 1.0 11.429319975947983 -4.344164697863277 1.0314619767592075 1.0006054273046603 4.208192866958301e-10 0.16903361221310975 0.1107216760943981 11.556275390527139 2.332373497712949 0.01360643468576123 20.038029489091283 4.527258597346234e-05 4.344164697863277 -1.000605426883841 AADKS(ph)PESQNLIDGTK ddPTM_A549_MK2206_60min_R1 3 AADKSPESQNLIDGTK 16 1 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 AADKS(0.962)PES(0.038)QNLIDGTK;AADKS(0.704)PES(0.296)QNLIDGTK;AADKS(0.991)PES(0.009)QNLIDGTK 213.48 7.5861e-47 112951900.0 15915.2 17528.899999999998 15420.6 13625.699999999999 20301.6 15727.900000000001 16548.5 15327.2 23579.4 22685.8 22320.8 True False 18601.296670718002 18421.046138014608 17607.472957824397 16963.997111680907 17315.2615333669 17392.215938664944 19555.148242746392 17499.877537581386 18238.703548564437 17561.062024027644 16777.92933725921 1.1086765414734219 1.097933229287507 1.0494425506205343 1.0110900320701965 1.0320261329814056 1.0366127779571446 1.165528108365538 1.043029636483146 1.0870652261039893 1.0466763610113263 1.0 14.034277054850298 -10.830799850807848 1.0158055662846972 0.9989859734417049 1.0696417311060105 0.11671455642889217 0.04348230850006352 0.6091267295840687 1.0891013673742376 0.03158520136201109 0.007336945779666014 1.4763867849334214e-11 10.830799850807848 0.07065575766430554 AADKS(ph)PESQNLIDGTK ddPTM_A549_PD325901_60min_R1 3 AADKSPESQNLIDGTK 16 1 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 AADKS(0.97)PES(0.03)QNLIDGTK;AADKS(0.993)PES(0.007)QNLIDGTK;AADKS(0.988)PES(0.012)QNLIDGTK 201.85 5.0350000000000006e-40 185379500.0 17640.800000000003 18788.6 18862.1 17509.7 21220.199999999997 17544.4 18253.2 20426.1 19950.300000000003 21492.4 21859.7 True False 19431.681029529413 20371.981260597437 20142.195533021506 18591.23440158607 19729.766357715816 17401.52422322729 18947.835514534294 20018.685411534545 19111.858270037083 20135.366196084076 19171.09548005539 1.0135926269703848 1.0626404360560087 1.0506543850859433 0.9697533675593771 1.0291413121509743 0.9076958717007554 0.9883543449171506 1.0442118674105474 0.9969100769395293 1.050298154168178 1.0 14.226645157791161 -6.246687299449453 24.19396129136966 0.9952009833449971 1.044330285570569 0.20247464950037852 0.038479422282974164 506.5638840024879 830779.9223655241 0.004591715076700848 0.01208758407566011 5.666471392519794e-07 6.246687299449453 0.04912930222557188 AADPPAENS(ph)SAPEAEQGGAE ddPTM_A549_MK2206_60min_R1 2 AADPPAENSSAPEAEQGGAE 20 0 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 AADPPAENS(0.5)S(0.5)APEAEQGGAE;AADPPAENS(0.5)S(0.5)APEAEQGGAE 75.46300000000001 0.00035931 37645000.0 342.61 484.37 0.0 869.75 563.86 303.6 552.99 386.40999999999997 1036.29 1097.09 883.25 True False 400.43419198971367 509.0223640884558 0.0 1082.8387890445615 480.91694094082567 335.7267504866305 653.4611249814983 441.1848008309945 801.571969615081 849.2566070379038 663.9146485401145 0.6031410707238205 0.7666984983803985 0.0 1.6309909585902669 0.7243656123544141 0.5056775765150865 0.9842547177086656 0.6645203593581165 1.2073418945909116 1.279165339860084 1.0 9.374853973451398 -8.758283179920207 24.9858162165898 1.0979114565867403 0.7416977747799187 0.20060655044912135 0.37367850813088327 105.19481831496833 832766.0861580409 0.060051066417267866 0.06669689274098287 1.7446841678578704e-09 8.758283179920207 -0.35621368180682156 AADPPAENS(ph)SAPEAEQGGAE ddPTM_A549_PD325901_60min_R1 3 AADPPAENSSAPEAEQGGAE 20 0 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 AADPPAENS(0.5)S(0.5)APEAEQGGAE;AADPPAENS(0.5)S(0.5)APEAEQGGAE;AADPPAENS(0.5)S(0.5)APEAEQGGAE 93.495 2.6738e-06 161122000.0 1902.89 1848.67 2580.29 1994.74 2790.34 2888.59 2800.03 2322.54 2477.1 2298.1400000000003 2784.34 True False 2096.069991966422 2004.4639088079284 2755.403995944252 2117.950559416768 2594.3561445504156 2865.0662807489634 2906.586673885207 2276.2151177026185 2372.99610134729 2153.0350481969745 2441.883831385491 0.8583823542404723 0.8208678410678626 1.1283927435568768 0.8673428818336016 1.0624404450388674 1.1733016304560913 1.1903050573196392 0.932155366461936 0.9717891043165985 0.8817106778480008 1.0 11.253778852771783 -5.739549956914038 24.96370433656958 1.0129927310038145 0.8396249257675439 0.3101055770840714 0.10464426162674423 212.23831739686037 242042.4837382426 0.013474912912166168 0.05209775884863278 1.821587523744025e-06 5.739549956914038 -0.1733678052362706 AADPPAENSS(ph)APEAEQGGAE ddPTM_A549_MK2206_60min_R1 2 AADPPAENSSAPEAEQGGAE 20 0 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 AADPPAENS(0.206)S(0.794)APEAEQGGAE;AADPPAENS(0.184)S(0.816)APEAEQGGAE 129.88 9.678e-17 119298000.0 2657.2 2560.3999999999996 1775.49 1804.06 3399.6000000000004 2643.4 2215.8999999999996 2498.1000000000004 2841.3 3982.3 3710.8999999999996 True False 3105.670397697286 2690.71342364738 2027.2811798430441 2246.054780987332 2899.5233434228885 2923.1228334530924 2618.500346925807 2852.2133251103955 2197.7500866237533 3082.6956641725324 2789.3811143702346 1.1133904871218936 0.9646273898483997 0.7267852963508532 0.8052161712202706 1.0394862604056603 1.0479467357091694 0.9387388239763689 1.0225255023117723 0.7878988193120913 1.1051539885644204 1.0 11.445729348554435 -4.4311232768933415 20.481570604558133 0.922112572470438 0.9353555167059977 0.0 0.13065089313172612 0.0 0.0 0.016828880836269246 0.0 3.70575516939464e-05 4.4311232768933415 0.013242944235559717 AADPPAENSS(ph)APEAEQGGAE ddPTM_A549_PD325901_60min_R1 1 AADPPAENSSAPEAEQGGAE 20 0 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 AADPPAENS(0.214)S(0.786)APEAEQGGAE 100.58 1.9127e-09 62939000.0 1016.9 907.31 948.61 1395.4 1473.4 1154.7 1181.6 1421.7 1427.9 1194.0 1428.9 True False 1120.134939397786 983.772197904722 1012.9883790553298 1481.5906888166667 1369.913466954057 1145.2965060395645 1226.5664345963303 1393.3430781979257 1367.8903286560067 1118.6106362306857 1253.154358543399 0.8938523269390151 0.7850367284747007 0.8083508405403261 1.1822890601751488 1.0931721679892432 0.9139309122068547 0.9787832011549055 1.1118686765910264 1.0915577313603815 0.8926359539066681 1.0 10.29134841567409 -6.24030597053787 24.877102621511572 1.046177253489227 0.8246756021331763 0.5229575343250116 0.08606086106420098 375.64208314667655 442184.8905520457 0.010549371926171452 0.027878351869851128 5.750346693285648e-07 6.24030597053787 -0.22150165135605082 AADPVPSFDESS(ph)QDTSEK ddPTM_A549_MK2206_60min_R1 2 AADPVPSFDESSQDTSEK 18 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 AADPVPSFDES(0.121)S(0.878)QDT(0.001)SEK;AADPVPSFDES(0.161)S(0.831)QDT(0.006)S(0.001)EK 169.09 3.2838e-30 20451700.0 2176.1400000000003 2619.7 2379.58 1835.0300000000002 3049.7 3069.2 2519.88 2079.8 3062.2 3438.2 3128.1 True False 2543.4192304850885 2753.031540356601 2717.0402254762957 2284.612432377627 2601.0931699131597 3393.980706829926 2977.7095781449557 2374.61801912037 2368.6165893285665 2661.508232066396 2351.306438831964 1.0817047018969415 1.1708518697903953 1.1555449262606594 0.9716353405269167 1.1062331676364905 1.4434446530567582 1.2664064236663954 1.0099143097230603 1.007361928760422 1.1319274204805598 1.0 11.199246858095092 -8.309720821526348 12.821865042115371 1.0040397335624314 1.1705758493340095 0.2123868824260704 0.11751181645456757 1.7557156290725193 465.47059699982805 0.01925332797311644 0.02328110279897665 4.900937661784856e-09 8.309720821526348 0.16653611577157812 AADPVPSFDESS(ph)QDTSEK ddPTM_A549_PD325901_60min_R1 2 AADPVPSFDESSQDTSEK 18 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 AADPVPSFDES(0.158)S(0.841)QDT(0.001)SEK;AADPVPSFDES(0.124)S(0.876)QDTSEK 205.42 3.4231e-49 24012000.0 5304.7 4573.9 5054.9 5250.1 5393.5 5246.0 4740.9 5749.3 5041.3 5433.6 5925.6 True False 5843.229238886262 4959.358605103448 5397.955911583041 5574.386753157792 5014.679166564891 5203.278315305758 4921.317543820025 5634.6257012614005 4829.431692592987 5090.521568696025 5196.788765473282 1.1243922935078363 0.9543121394605673 1.0387098947423616 1.0726598683774133 0.9649572828285226 1.0012487615189578 0.9469920302546356 1.0842514397924048 0.9293107552646814 0.9795513726701225 1.0 12.343404703452851 -2.0000000000005045 0.3373561663119955 0.9729331252326919 2.11006142380411 0.21451955535608747 0.05347567390061139 53.575731054496345 0.6639318074478601 0.014787154724770685 38.88478564634204 0.009999999999988384 2.0000000000005045 1.137128298571418 AADRLPNLS(ph)SPSAEGPPGPPSGPAPR ddPTM_A549_MK2206_60min_R1 1 AADRLPNLSSPSAEGPPGPPSGPAPR 26 1 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AADRLPNLS(0.477)S(0.477)PS(0.046)AEGPPGPPSGPAPR 90.03 4.6776000000000005e-09 23074000.0 2999.2 2914.8 2506.8 2280.1 3676.8 2960.2 2417.6 2207.0 4193.9 4023.0 4014.5 True False 3505.391636600068 3063.150869882591 2862.3019344690993 2838.7246023575785 3135.947590627509 3273.4463991782713 2856.8466260787195 2519.8490086540332 3243.9883462821113 3114.201505905156 3017.588855436503 1.1616531623533595 1.015098814526705 0.9485394040054071 0.9407261023128841 1.0392229494676752 1.0847887356426353 0.9467315671357318 0.8350537894233871 1.075026619493814 1.0320165055933963 1.0 11.559180537634175 AADRLPNLSS(ph)PSAEGPPGPPSGPAPR ddPTM_A549_MK2206_60min_R1 1 AADRLPNLSSPSAEGPPGPPSGPAPR 26 1 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AADRLPNLS(0.19)S(0.805)PS(0.006)AEGPPGPPSGPAPR 141.98 1.0792999999999999e-32 19074000.0 2281.2 3272.4 2199.3 1995.6 4097.6 2709.7 2295.6 2321.0 4454.7 4112.1 3888.9 True False 2666.2107900146975 3438.9511824494944 2511.1938106262523 2484.522089585889 3494.848468057898 2996.4386554467146 2712.6808052722986 2650.0088577643905 3445.717562694132 3183.1737540225186 2923.178801820154 0.91209295454474 1.1764422964165544 0.8590626782948159 0.849938460158123 1.1955643855523947 1.0250617080217415 0.9279900372783265 0.9065503814252927 1.1787570300347734 1.0889425416058967 1.0 11.513322361705429 -8.756262265661045 24.984992177135943 1.0844130406606998 0.9864056179398653 0.14501342931820937 0.11581868551042894 207.98749865893365 1003757.0677766914 0.020926585651490606 0.02338149597973912 1.7528216724366025e-09 8.756262265661045 -0.09800742272083451 AADRLPNLSS(ph)PSAEGPPGPPSGPAPR ddPTM_A549_PD325901_60min_R1 2 AADRLPNLSSPSAEGPPGPPSGPAPR 26 1 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AADRLPNLS(0.033)S(0.771)PS(0.197)AEGPPGPPSGPAPR;AADRLPNLS(0.057)S(0.907)PS(0.036)AEGPPGPPSGPAPR 181.02 1.3948999999999998e-57 62837000.0 5083.6 5002.6 4770.4 4655.9 5740.2 4970.3 4995.0 5096.3 5101.0 5823.0 5448.3 True False 5599.683329651476 5424.186658626227 5094.148030745556 4943.4843686839 5337.028154614956 4929.823524697716 5185.08745836888 4994.650298529992 4886.6227092053305 5455.334786240603 4778.19363961929 1.1719247380894424 1.135196073606261 1.0661242333308703 1.0345927230102339 1.1169551837250766 1.0317337254441006 1.0851564104425895 1.045300939065322 1.022692481252116 1.1417148817508505 1.0 12.222249605860624 -2.0000000000000004 0.192233205970098 0.9954174900841141 1.7342838386554165 0.12763094135264275 0.05045172772046525 18.494260011634495 0.20138835782724449 0.02506498514693076 4.117253707290019 0.00999999999999999 2.0000000000000004 0.7388663485713024 AADS(ph)DDGAVSAPAASDGGVSK ddPTM_A549_MK2206_60min_R1 2 AADSDDGAVSAPAASDGGVSK 21 0 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 1 AADS(1)DDGAVSAPAASDGGVSK;AADS(1)DDGAVSAPAASDGGVSK 253.99 3.6840999999999996e-98 65452000.0 4181.5 4781.299999999999 4168.6 3302.9 5281.799999999999 4168.3 3727.2 4058.1 6029.700000000001 4614.9 5729.4 True False 4887.234972140298 5024.647747416507 4759.770162768426 4112.110648272814 4504.854216758153 4609.386739306394 4404.383994341742 4633.348102410027 4663.982577452312 3572.390884812753 4306.63185660428 1.1348160546032406 1.166723303667375 1.1052187234135773 0.9548321716811793 1.0460272358432254 1.070299689591028 1.0226980482642272 1.0758635185649137 1.0829768442594019 0.8295092322169219 1.0 12.072344287751616 -6.012666093916699 15.573432659707299 1.0392700725901525 1.1470750443289788 0.33349323199857117 0.07245082079724417 2.292969071805803 2822.7333775600114 0.005607814878341445 0.015780642796656818 9.712564280074876e-07 6.012666093916699 0.1078049717388263 AADS(ph)DDGAVSAPAASDGGVSK ddPTM_A549_PD325901_60min_R1 2 AADSDDGAVSAPAASDGGVSK 21 0 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 1 AADS(1)DDGAVSAPAASDGGVSK;AADS(0.998)DDGAVS(0.002)APAASDGGVSK 275.76 3.867999999999999e-127 104789000.0 14781.1 13567.300000000001 14337.2 14276.3 16654.5 15879.099999999999 14506.0 15465.7 16231.5 16617.7 16398.7 True False 16281.666390729295 14710.663985443483 15310.20860858738 15158.114627170258 15484.745374905891 15749.78587429882 15058.033767987776 15157.224480893063 15549.346501561722 15568.455586005575 14381.763859924176 1.1321049733057664 1.0228692480785206 1.0645570847711094 1.0539816099615875 1.0766930625286688 1.095121991133976 1.047022737589794 1.0539197158652955 1.0811849403876739 1.0825136428076254 1.0 13.811953006363531 -10.830172841915378 0.8435700859748202 0.9954251812207374 1.0685766757413762 0.0 0.036224467909691686 0.4804452056080621 0.542129324142397 0.02376486839584637 0.004571028253727863 1.478519844975345e-11 10.830172841915378 0.07315149452063874 AADSQNSGEGNTGAAES(ph)SFSQEVSR ddPTM_A549_MK2206_60min_R1 2 AADSQNSGEGNTGAAESSFSQEVSR 25 0 P12270 P12270 TPR Nucleoprotein TPR 1 AADSQNSGEGNT(0.003)GAAES(0.475)S(0.475)FS(0.047)QEVSR;AADSQNS(0.001)GEGNT(0.018)GAAES(0.473)S(0.393)FS(0.095)QEVS(0.02)R 75.758 1.8762000000000001e-06 4495000.0 663.27 638.5699999999999 773.0999999999999 747.36 1015.79 554.61 630.96 730.04 1018.99 884.3299999999999 1102.3400000000001 True False 775.2137606054036 671.0704854470038 882.7372050175762 930.4632335502653 866.3686366088766 613.2984620796773 745.597264721471 833.5254056537335 788.1903919926583 684.5592388061411 828.5985549637254 0.9355721850605221 0.8098861401905076 1.0653376109933246 1.1229361045542727 1.0455830889625493 0.7401635670321999 0.8998293084811281 1.0059460044438815 0.9512331240152403 0.8261651371527071 1.0 9.694529494102845 -10.579703823207945 0.8070988160275138 1.0007478691947065 0.9532171432172816 0.0 0.1172318447062773 2.829206196222456 3.202866749803747 0.08205734861861125 0.02107472715699845 2.6320623735084336e-11 10.579703823207945 -0.047530725977424915 AADSQNSGEGNTGAAESS(ph)FSQEVSR ddPTM_A549_PD325901_60min_R1 1 AADSQNSGEGNTGAAESSFSQEVSR 25 0 P12270 P12270 TPR Nucleoprotein TPR 1 AADSQNSGEGNTGAAES(0.232)S(0.685)FS(0.082)QEVS(0.001)R 121.19 1.3815999999999998e-17 2555600.0 301.96 519.64 520.35 288.82 421.1 364.26 354.34 620.2 598.26 384.54 573.1 True False 332.61475690879666 563.4318864767387 555.664080118743 306.65975544218844 391.52338871613523 361.2935873300179 367.8246026022879 607.8296244625121 573.1172127051914 360.2600787739931 502.6123331802245 0.6617719760361096 1.1210068859864324 1.1055520197899629 0.6101317759192904 0.7789768831154896 0.7188315197997078 0.7318256602955164 1.2093408464860715 1.1402768592621972 0.71677524603204 1.0 8.973302262504719 -8.25660589401003 24.981606948374772 1.078825150319848 0.8276457394434474 0.16678295043966096 0.195311872406066 360.2294595906751 1861827.7438106753 0.02749423406918774 0.03491208704839171 5.538524816397527e-09 8.25660589401003 -0.2511794108764006 AADSQNSGEGNTGAAESSFS(ph)QEVSR ddPTM_A549_PD325901_60min_R1 1 AADSQNSGEGNTGAAESSFSQEVSR 25 0 P12270 P12270 TPR Nucleoprotein TPR 1 AADS(0.002)QNS(0.035)GEGNT(0.099)GAAES(0.282)S(0.24)FS(0.333)QEVS(0.008)R 45.685 0.0067899 2861500.0 361.8 310.84 392.0 444.66 226.05 277.06 254.92 189.55 254.17 263.35 456.32 True False 398.5296696569172 337.0355776930748 418.6034772874933 472.12563830386915 210.17302783016473 274.8037152189503 264.6211200975765 185.76927655090168 243.48811879998416 246.72203605640777 400.1955328508113 0.9958373768391985 0.8421772609308914 1.0459973760965102 1.179737402216013 0.5251758467491816 0.6866736199211755 0.6612295699867907 0.4641962773236515 0.6084228803492266 0.6165037233146308 1.0 8.644561253145438 -6.755165607629085 24.999330300984273 0.7456834083572035 1.0056730325667311 0.48079558976807624 0.16443574619378512 163.94431522060898 653268.199502076 0.029851687931197586 0.06094914139658351 1.7572534003727968e-07 6.755165607629085 0.25998962420952765 AADSSDS(ph)DGAEESPAEPGAPR ddPTM_A549_MK2206_60min_R1 2 AADSSDSDGAEESPAEPGAPR 21 0 P16383-3;P16383-4;P16383;C9JII4;P16383-2 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 AADS(0.131)S(0.119)DS(0.745)DGAEES(0.005)PAEPGAPR;AADS(0.02)S(0.02)DS(0.956)DGAEES(0.004)PAEPGAPR 121.27 7.429000000000001e-15 3129400.0 336.53999999999996 0.0 198.84 264.07 511.52 308.66 113.73 471.52 316.83 566.4 553.96 True False 393.33972438696554 0.0 227.038501934672 328.76716185455257 436.27608560644654 341.3221963280742 134.39326885503507 538.3594039694381 245.0685108735453 438.4498466181158 416.3964434817798 0.9446279634330663 0.0 0.5452460161192672 0.7895532418709008 1.0477421035550623 0.8197048790187599 0.3227531621818852 1.29290106194914 0.5885461192328093 1.0529625156063587 1.0 8.701813936142335 -14.999999878597478 0.0456671515907658 2.201612231449666 2.990596872767337e-11 0.14235451708391078 0.32954190407163597 763.4218897034293 2.6693129426958886 123.34464289174936 32.72499438953073 1.000000279539676e-15 14.999999878597478 -2.20161223141976 AADTEEMDIEMDS(ph)GDEA ddPTM_A549_MK2206_60min_R1 6 AADTEEMDIEMDSGDEA 17 0 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 1 AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA 70.977 0.00031893 35686730.0 1183.03 1451.03 1207.7 1232.26 1832.4700000000003 1303.52 1108.5 693.12 2534.27 1916.0899999999997 1752.9099999999999 True False 1382.6965416934447 1524.8812291497654 1378.9700200487991 1534.163755318253 1562.9160904583305 1441.4576211934532 1309.9001013435889 791.3718825909762 1960.2618913975946 1483.2439382176995 1317.6140691451476 1.0493941845889077 1.157304908059376 1.0465659500307694 1.1643498587667633 1.186171373740971 1.093990763265494 0.9941455028583874 0.6006097696758876 1.4877360050271695 1.125704387157926 1.0 10.363712149648926 AADTEEMDIEMDS(ph)GDEA ddPTM_A549_PD325901_60min_R1 8 AADTEEMDIEMDSGDEA 17 0 Q9UBB5 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 1 AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA;AADTEEMDIEMDS(1)GDEA 119.16 3.7589999999999996e-10 78837700.0 3495.66 4205.219999999999 3972.31 4264.7 4674.099999999999 4823.03 3955.08 4227.66 4579.860000000001 4409.57 5352.5 True False 3850.5368298311178 4559.608647620873 4241.8948440405175 4528.120833163566 4345.807340769621 4783.752842750501 4105.592733702818 4143.336004764891 4387.3844110921655 4131.148997658074 4694.176432293054 0.820279528341071 0.9713330364520522 0.903650492311896 0.9646251900573811 0.9257869625166052 1.0190824549842687 0.8746140655171925 0.8826545112921793 0.9346441222169777 0.8800583142206381 1.0 12.196656351749146 AADTT(ph)PR ddPTM_A549_MK2206_60min_R1 2 AADTTPR 7 0 A8CG34;A8CG34-2;A6NF01;C9JFL1;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 AADT(0.01)T(0.99)PR;AADT(0.005)T(0.995)PR 107.66 0.0097284 117815000.0 18629.4 16441.6 12675.699999999999 9517.4 6011.0 5090.299999999999 4693.1 4889.2 5214.299999999999 26357.1 26289.9 True False 21773.5872748991 17278.4072122484 14473.304863072432 11849.163427252328 5126.789862723548 5628.952167332329 5545.775521529636 5582.259072547031 4033.269375526076 20403.012804199054 19761.39226567196 1.101824556801222 0.8743517146948792 0.7324030953129955 0.5996117716784473 0.2594346488242851 0.2848459304717376 0.2806368826129397 0.28248308608519057 0.20409844211899866 1.0324683873434197 1.0 14.270396973436695 -5.762110983878957 1.5364091012339616 0.5163713224440912 1.0965503602550122 0.3366492442243043 0.2763359308951406 0.5895106202862529 2.2641213181413296 0.04915104546238609 0.3883962985340636 1.7293743614254263e-06 5.762110983878957 0.580179037810921 AADTT(ph)PR ddPTM_A549_PD325901_60min_R1 1 AADTTPR 7 0 A8CG34;A8CG34-2;A6NF01;C9JFL1;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 AADT(0.015)T(0.985)PR 82.45200000000001 0.015849000000000002 116410000.0 4613.0 4452.2 4061.2 3904.6 3225.3 3246.3 2499.5 3438.1 4158.2 4381.3 5697.1 True False 5081.308364088883 4827.402518997259 4336.81745397951 4145.778274010002 2998.7660546809566 3219.863209107336 2594.6198402788805 3369.5243983627265 3983.445314530018 4104.663970282667 4996.392816892438 1.0169953705219796 0.966177539659445 0.8679896903456126 0.8297542699191764 0.6001862072458252 0.6444375626794624 0.519298609089874 0.6743914103331932 0.7972642385246976 0.8215254726179854 1.0 12.286671190892289 -5.783800144926703 2.2451698471777632 0.8146734563872332 1.0110413197860841 0.22222397907159364 0.14046057259037137 0.5376937200869321 5.156209380030118 0.026042323687850394 0.13698389567730654 1.645128609781483e-06 5.783800144926703 0.19636786339885093 AAEAAAAPAESAAPAAGEEPS(ph)KEEGEPK ddPTM_A549_MK2206_60min_R1 2 AAEAAAAPAESAAPAAGEEPSKEEGEPK 28 1 P80723 P80723 BASP1 Brain acid soluble protein 1 1 AAEAAAAPAESAAPAAGEEPS(1)KEEGEPK;AAEAAAAPAESAAPAAGEEPS(1)KEEGEPK 135.17 6.849899999999999e-28 19411300.0 3519.5 3880.8 3357.2 2984.3 4463.0 3610.1000000000004 2715.5 2747.3 4786.0 4216.8 4640.4 True False 4113.50555648638 4078.316143762991 3833.301441838064 3715.4536339703172 3806.4986121003494 3992.1183858095646 3208.871199998662 3136.7381882533855 3701.9786416715215 3264.2219513052105 3488.060611475286 1.1793102284270685 1.1692216959607404 1.0989778759081705 1.0651918208493674 1.0912937119204413 1.144509465424996 0.9199585550325229 0.8992785784552902 1.061328644775401 0.9358271873390979 1.0 11.768209394477346 -7.736940979439064 24.99825319000869 1.0104751130414569 1.1213727289262023 0.602201749374218 0.059977438538628615 171.76625463016225 175270.5917881104 0.00967693059979202 0.014349481796868936 1.8325634505727017e-08 7.736940979439064 0.11089761588474545 AAEAAAAPAESAAPAAGEEPS(ph)KEEGEPK ddPTM_A549_PD325901_60min_R1 1 AAEAAAAPAESAAPAAGEEPSKEEGEPK 28 1 P80723 P80723 BASP1 Brain acid soluble protein 1 1 AAEAAAAPAESAAPAAGEEPS(1)KEEGEPK 128.33 1.5549000000000001e-27 15753000.0 1925.6 1784.7 1955.6 2052.3 2501.3 1442.6 1877.0 2312.8 2424.5 2673.8 2767.3 True False 2121.085494448203 1935.1029324051938 2088.318775978118 2179.065909888524 2325.6173170165494 1430.851943892506 1948.4302621338106 2266.669389643498 2322.6066964258625 2504.9758116864373 2426.939643360031 0.8739753789309811 0.7973428336792493 0.860474129091607 0.8978657198378726 0.9582509904518254 0.5895704690502854 0.8028342474295169 0.9339619944175278 0.9570104896429471 1.0321541446405182 1.0 11.244922514573496 -8.434187699242358 3.4894444988528788 0.9788959258176235 0.8252613192702251 0.41864913459750097 0.08913727127357673 0.19236418365175925 4.448021011759829 0.014977741271143945 0.018049838830853423 3.6796990507794805e-09 8.434187699242358 -0.15363460654739847 AAEAAAAPAESAAPAAGEEPSKEEGEPK ddPTM_A549_MK2206_60min_R1 2 AAEAAAAPAESAAPAAGEEPSKEEGEPK 28 1 P80723 P80723 BASP1 Brain acid soluble protein 1 0 ; 141.5 2.4364999999999997e-35 14173700.0 1840.85 2034.51 2661.2 2534.0 2829.5 1806.1 2656.01 2207.87 3605.2 2920.5 3304.3 False True 2151.540475538557 2138.0578689051845 3038.598176164499 3154.8301137555823 2413.2842982159846 1997.2203032078494 3138.5726370496936 2520.842333818296 2788.627956321386 2260.75702162466 2483.7511159593564 0.8662464051707202 0.8608180808322871 1.2233907643322108 1.2701876985516802 0.9716288732431414 0.8041145066326087 1.263642164821901 1.0149335485430122 1.12274854690675 0.9102188247035515 1.0 11.278304900345857 -7.771882739172845 24.99941274224971 1.0695484748083524 1.0143265399623271 0.03242322740358439 0.15793725101897008 764.5915896910569 1830282.5457955545 0.024549753147218484 0.03411820051040681 1.6908974174447386e-08 7.771882739172845 -0.05522193484602522 AAEAAAAPAESAAPAAGEEPSKEEGEPK ddPTM_A549_PD325901_60min_R1 2 AAEAAAAPAESAAPAAGEEPSKEEGEPK 28 1 P80723 P80723 BASP1 Brain acid soluble protein 1 0 ; 155.56 1.8673e-45 26210000.0 3795.6000000000004 4354.799999999999 4364.5 3806.7 4919.6 4368.0 4746.4 4943.7 3937.6000000000004 4735.0 5036.1 False True 4180.92651782696 4721.794279171927 4660.701215870576 4041.8312133570353 4574.064267698643 4332.428456205785 4927.026849329736 4845.094025242376 3772.11636537285 4436.031291919842 4416.691626468205 0.9466195223528037 1.0690794555081258 1.0552471419874727 0.9151264238452332 1.0356313400481347 0.9809216541726729 1.1155469446413717 1.096996221381374 0.8540592562015049 1.0043787674321067 1.0 12.108750391548693 -8.758809862103105 24.999999438665455 0.9310835396018149 1.0272352978122494 0.16732050648473562 0.06911013628770647 71.48118038076437 679603.7375062054 0.012940246748961734 0.014346364240307509 1.7425696185279087e-09 8.758809862103105 0.09615175821043453 AAEAAPPT(ph)QEAQGETEPTEQAPDALEQAADTSR ddPTM_A549_MK2206_60min_R1 1 AAEAAPPTQEAQGETEPTEQAPDALEQAADTSR 33 0 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 AAEAAPPT(0.448)QEAQGET(0.448)EPT(0.104)EQAPDALEQAADTSR 51.236000000000004 0.006102000000000001 1060800.0 0.0 174.58 178.82 152.83 363.11 258.71 0.0 0.0 0.0 255.01 216.72 True False 0.0 183.46537630852993 204.17936489618802 190.27335686079945 309.6970000089085 286.0865204822007 0.0 0.0 0.0 197.40306388786323 162.9024428322826 0.0 1.1262285151697697 1.2533843037971037 1.1680202798229171 1.9011194345793778 1.7561831210643242 0.0 0.0 0.0 1.2117870085662312 1.0 7.347864427988035 -7.765558190134921 24.999985248841924 0.4318181912744674 1.2301617918534735 0.2944334091651599 0.5835602371187643 105.78109164140953 642061.5652177642 0.09613450324224813 0.13544286667287533 1.7157018117160458e-08 7.765558190134921 0.7983436005790061 AAEAAPPTQEAQGET(ph)EPTEQAPDALEQAADTSR ddPTM_A549_PD325901_60min_R1 1 AAEAAPPTQEAQGETEPTEQAPDALEQAADTSR 33 0 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 AAEAAPPT(0.438)QEAQGET(0.449)EPT(0.113)EQAPDALEQAADTSR 44.021 0.029211 1482600.0 0.0 0.0 0.0 255.56 204.6 0.0 0.0 208.15 151.18 168.29 217.71 True False 0.0 0.0 0.0 271.34536078112893 190.22960183168195 0.0 0.0 203.99828495948393 144.82643034261167 157.66414067944893 190.93305017739763 0.0 0.0 0.0 1.4211544859783023 0.9963157329489991 0.0 0.0 1.0684283562743446 0.7585194402333809 0.8257561513470912 1.0 7.576923042123787 -7.237462242910498 0.24679597690582747 1.0313482181340687 3.468647853364953e-13 0.21846333073911695 0.46637534646316225 4.386603535647571 0.5120189745879843 0.4506649392135905 1.4290124564412099 5.788123074736854e-08 7.237462242910498 -1.031348218133722 AAEAAPPTQEAQGETEPTEQAPDALEQAADT(ph)SRR ddPTM_A549_PD325901_60min_R1 1 AAEAAPPTQEAQGETEPTEQAPDALEQAADTSRR 34 1 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 AAEAAPPTQEAQGET(0.001)EPT(0.008)EQAPDALEQAADT(0.496)S(0.496)RR 58.089 0.0014437 3689100.0 468.72 213.16 268.55 145.36 683.2 390.82 195.37 340.42 652.92 407.37 496.42 True False 516.3041093465733 231.1237412850851 286.77541792233785 154.33855706348763 635.2143889120485 387.63729149595804 202.80491226056608 333.63005604567616 625.4800429904617 381.64858867780066 435.36348706565474 1.1859150449810514 0.5308753447443575 0.6587034201126997 0.35450505531303933 1.4590437824572446 0.8903762097934056 0.4658289413002203 0.7663253027816807 1.4366846590792226 0.8766205711234722 1.0 8.766076606859418 -8.741455689834673 24.61788802929869 1.2062121889614528 0.7764682873497036 0.1335094204112991 0.33023956337475374 200.65709284490597 247189.02895983178 0.05559253856349836 0.06299361090670627 1.8136117054726995e-09 8.741455689834673 -0.42974390161174914 AAEAFSELS(ph)KR ddPTM_A549_MK2206_60min_R1 1 AAEAFSELSKR 11 1 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 AAEAFS(0.004)ELS(0.996)KR 49.31 0.011974 2664400.0 896.77 875.17 818.71 1005.8 1413.3 991.24 752.74 839.42 1288.3 1335.1 1664.4 True False 1048.1228520785023 919.7124148466957 934.8153888500063 1252.2210451520782 1205.405442187189 1096.1323588681405 889.5031143756183 958.4103556159348 996.502106992357 1033.4999827327792 1251.0835448968776 0.8377720707412033 0.7351326924554061 0.7472046072886842 1.0009092120664846 0.9634891667339022 0.8761464119156733 0.7109861831401011 0.7660642325009024 0.7965112410414567 0.8260839069847785 1.0 10.288962417718142 -10.728725182301533 0.9957090605294558 0.9994598295079494 0.8259360103651723 0.0 0.10082633257951155 0.5317613421719929 0.9414319513063345 0.06435243742746659 0.016839142606711877 1.8675610931100547e-11 10.728725182301533 -0.17352381914277715 AAEAFSELS(ph)KR ddPTM_A549_PD325901_60min_R1 2 AAEAFSELSKR 11 1 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 AAEAFS(0.001)ELS(0.999)KR;AAEAFS(0.008)ELS(0.992)KR 56.29 0.006453100000000001 10744100.0 2324.27 2385.19 2812.3999999999996 3249.3900000000003 3467.5 2733.0 2949.4 2810.83 3616.9 3098.7 3630.3999999999996 True False 2560.228179362859 2586.1983321250336 3003.2663763350697 3450.097440399879 3223.9547622255955 2710.7433541232626 3061.641030973609 2754.7657905965216 3464.8942711085583 2903.0475531725483 3183.8838150017195 0.8041211074661895 0.8122778601214872 0.9432713474607263 1.0836128580269866 1.0125855557401533 0.851395186391812 0.9616057648045663 0.8652218330382241 1.088260273437989 0.9117944378165007 1.0 11.63657197526125 -3.6971595482442625 0.41122479803600637 1.0230061151521954 1.0942276148398943e-10 0.17168169449581638 0.08719335055985172 12.353049629620495 0.5210667407237093 0.019704510414426262 8.26513558207308 0.00020083548608936777 3.6971595482442625 -1.0230061150427727 AAEAGGAEEQYGFLT(ph)TPTK ddPTM_A549_PD325901_60min_R1 1 AAEAGGAEEQYGFLTTPTK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAEAGGAEEQYGFLT(0.494)T(0.494)PT(0.011)K 137.72 4.2235e-17 55214000.0 2380.8 2319.6 2685.1 2539.3 2929.8 2486.6 2440.9 2584.6 2610.9 2519.3 3452.2 True False 2622.497063347674 2515.080832636908 2867.32703281798 2696.1467938312767 2724.020955261297 2466.349954029602 2533.7897852117303 2533.048125420525 2501.1729526493245 2360.2309680535723 3027.601285298848 0.866196310617834 0.8307173222740424 0.9470622987052116 0.8905224102404046 0.8997290919674104 0.8146217819385534 0.8368967860844416 0.8366518199474517 0.8261236262496959 0.7795712663732071 1.0 11.563959509273392 -10.812718921158444 1.035808152629657 1.000769913418108 0.8599490767025559 0.0 0.07447619572145076 0.2777999157097786 0.5244273775671873 0.028691703570152133 0.006973120457587049 1.5391504684345537e-11 10.812718921158444 -0.14082083671555212 AAEAGGAEEQYGFLTT(ph)PTK ddPTM_A549_MK2206_60min_R1 4 AAEAGGAEEQYGFLTTPTK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAEAGGAEEQYGFLT(0.081)T(0.919)PTK;AAEAGGAEEQYGFLT(0.115)T(0.87)PT(0.016)K;AAEAGGAEEQYGFLT(0.003)T(0.995)PT(0.002)K;AAEAGGAEEQYGFLT(0.032)T(0.951)PT(0.017)K 205.95 3.3255e-55 576136000.0 13151.8 14414.5 14732.2 13573.8 18583.800000000003 14515.699999999999 14072.1 13760.2 19990.300000000003 20984.1 22315.300000000003 True False 15371.50230936143 15148.136480692545 16821.44748643118 16899.381609351032 15850.147637811004 16051.741739258163 16628.818417787206 15710.750488845144 15462.528967949476 16243.77723590961 16773.795139051486 0.9163997879987611 0.9030834319316202 1.0028408804915445 1.0074870635570816 0.9449350910999196 0.956953486446708 0.9913569517176971 0.9366246790667282 0.9218265061524915 0.968402028357439 1.0 14.033921520976817 -7.024238103525401 0.004240117105526212 1.9041217729452322 5.257829114353466e-06 0.08927636978343145 0.03418549114684385 31347.79815623552 39.00993050093851 8623.246237206813 8895.182215116854 9.457185255939203e-08 7.024238103525401 -1.904116515116118 AAEAGGAEEQYGFLTT(ph)PTK ddPTM_A549_PD325901_60min_R1 6 AAEAGGAEEQYGFLTTPTK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAEAGGAEEQY(0.007)GFLT(0.204)T(0.584)PT(0.204)K;AAEAGGAEEQYGFLT(0.07)T(0.925)PT(0.006)K;AAEAGGAEEQYGFLT(0.247)T(0.744)PT(0.008)K;AAEAGGAEEQYGFLT(0.098)T(0.902)PTK;AAEAGGAEEQYGFLT(0.048)T(0.936)PT(0.016)K;AAEAGGAEEQYGFLT(0.073)T(0.921)PT(0.006)K 277.44 3.287799999999999e-126 776513000.0 55406.80000000001 56196.200000000004 52946.6 55669.99999999999 66287.09999999999 59683.700000000004 59638.7 63106.0 60450.700000000004 64743.3 66809.0 True False 61031.657547669674 60932.05099458107 56539.87466977043 59108.609464256704 61631.32277408055 59197.655735267675 61908.28336404888 61847.301324300715 57910.167301971895 60655.39698883931 58591.91653714459 1.0416395495269113 1.039939544492506 0.9649773895674967 1.008818501896666 1.0518741563097551 1.0103382724772123 1.0566010982897591 1.0555603055771756 0.9883644489638685 1.0352178350470336 1.0 15.838414020712456 -8.789601610898494 24.989764474298994 0.9945054282392627 1.027393189704311 0.04318655284858253 0.028385658724366554 219.48281933852812 194757.1532120116 0.004582129361443656 0.004878620663015212 1.62329850656538e-09 8.789601610898494 0.03288776146504824 AAEDDEDDDVDT(ph)KKQKTDEDD ddPTM_A549_MK2206_60min_R1 1 AAEDDEDDDVDTKKQKTDEDD 21 3 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 AAEDDEDDDVDT(0.63)KKQKT(0.37)DEDD 69.548 0.00041405 7257300.0 901.84 1270.5 1398.3 783.2 1641.5 921.31 977.06 796.33 1840.0 1483.2 2196.3 True False 1054.0485441289038 1335.1630232557402 1596.5999660795194 975.0840351591844 1400.0375244819018 1018.8024126839182 1154.5791547305073 909.2122161583443 1423.242937876222 1148.144089872863 1650.8980952036834 0.6384697802918345 0.8087495086067147 0.96710994501604 0.5906385366801705 0.8480459990531207 0.6171201091356405 0.6993642781979577 0.5507379400338869 0.8621022351477279 0.6954663605273639 1.0 10.689035354591233 -9.151999278134568 2.3386109390683276 0.9510781644899998 0.723497215969225 0.051037891450262274 0.14266672456940932 0.19185278718349022 2.1732881933975947 0.02374463886497598 0.022579156597251536 7.046942402783441e-10 9.151999278134568 -0.22758094852077482 AAEDDEDDDVDT(ph)KKQKTDEDD ddPTM_A549_PD325901_60min_R1 2 AAEDDEDDDVDTKKQKTDEDD 21 3 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 AAEDDEDDDVDT(0.558)KKQKT(0.442)DEDD;AAEDDEDDDVDT(0.5)KKQKT(0.5)DEDD 119.73 4.1659e-15 19299800.0 3529.2 2937.7 3169.3999999999996 4021.8 4271.4 4158.1 4090.2 3954.6000000000004 4426.799999999999 3941.2000000000003 4543.9 True False 3887.4817859402747 3185.2702888590475 3384.494543150464 4270.217451829488 3971.39159953004 4124.237812213663 4245.85479924332 3875.7224006763154 4240.756990611675 3692.3519593905994 3985.0291061553335 0.9755215538916928 0.7993091653807579 0.8493023395795842 1.0715649341766784 0.9965778150517824 1.0349329207767406 1.065451389723882 0.9725706632079095 1.0641721497244125 0.9265558320985258 1.0 11.960374546180873 -6.256198806611443 24.978193692790857 1.0294272264478506 0.8671708238519231 0.5354265209254156 0.05778916269604678 176.23094178248695 839967.6772964806 0.006462498260241129 0.016567562946584912 5.54371880525085e-07 6.256198806611443 -0.16225640259592744 AAEDDEDDDVDTK ddPTM_A549_MK2206_60min_R1 1 AAEDDEDDDVDTK 13 0 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 124.1 1.327e-05 4438900.0 852.36 754.76 823.87 810.26 846.18 481.24 918.91 635.06 1141.2 1090.9 1156.0 False True 996.2175297987577 793.1740601593882 940.707154440345 1008.7737363739541 721.7080429278683 532.1644973787417 1085.8640524362986 725.0816997896831 882.7200221219265 844.4649323370459 868.9332960230649 1.1464833196728073 0.9128135195067196 1.0825999633640173 1.160933458288353 0.8305678309612287 0.6124342338063841 1.2496517942241168 0.8344503578217545 1.0158662651804928 0.9718409182868168 1.0 9.763101622061424 -5.242491152115893 22.587040469918076 0.9860403765069723 1.1464838655132836 0.07814437158014298 0.16590889677000004 2215.4748441686497 2640772.2865429996 0.020964460237540606 0.8570700304499379 5.721486109207014e-06 5.242491152115893 0.16044348900631134 AAEDDEDDDVDTK ddPTM_A549_PD325901_60min_R1 2 AAEDDEDDDVDTK 13 0 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ; 186.02 8.3283e-25 12612100.0 4254.2 4376.2 3775.2 4036.0 4625.5 3789.0 4265.4 3999.4 4786.1 4330.4 4952.200000000001 False True 4686.083252223488 4744.997732275234 4031.407774121798 4285.294553578951 4300.620837108724 3758.143640238948 4427.722131116442 3919.6288295313934 4584.956861111087 4056.9778049693136 4343.110794582282 1.0789693088348193 1.0925343507686418 0.9282304700010621 0.9866878272883454 0.9902166996230993 0.8653114824809355 1.0194817356811865 0.9024934004494769 1.0556849866299727 0.9341179621827979 1.0 12.084513041680365 -5.730877112532538 24.988505701009654 0.9973964235003601 1.085751984851851 0.267092918170613 0.05984179292961234 224.4672294877012 183527.14555689783 0.008426289992432019 0.03262750300396108 1.858330211685356e-06 5.730877112532538 0.08835556135149103 AAEDDEDDDVDTKK ddPTM_A549_MK2206_60min_R1 2 AAEDDEDDDVDTKK 14 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ; 188.31 2.8963e-26 82078000.0 8412.5 9566.4 10105.3 9043.2 11211.3 8823.8 8863.2 8975.5 11759.1 12375.900000000001 13188.1 False True 9832.324334121795 10053.2888986019 11538.383492257293 11258.78440596467 9562.132621519306 9757.528659235597 10473.528712880923 10247.804611315936 9095.682625424062 9580.175594564162 9913.130796956568 0.991848542656213 1.014138631328093 1.163949485645816 1.1357445631022272 0.9645926012047554 0.9843034313873128 1.0565308707614756 1.033760657577737 0.9175388494033115 0.9664127096462173 1.0 13.275125050642501 -7.73993664747572 0.8484006557135702 0.9647404470117609 1.0649589098991954 0.2198095648187891 0.06221640070973135 0.5803145937131908 0.8417591157614017 0.013386832110931727 0.024273990387090064 1.8199663260668433e-08 7.73993664747572 0.10021846288743452 AAEDDEDDDVDTKK ddPTM_A549_PD325901_60min_R1 2 AAEDDEDDDVDTKK 14 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ; 184.02 4.9601e-26 118729000.0 37990.0 34403.0 37118.0 36109.0 41126.0 34780.0 38731.0 38930.0 38269.0 38941.0 41439.0 False True 41846.71683324014 37302.261547338996 39637.05068866629 38339.370920510955 38237.45163699782 34496.76321127227 40204.929399416425 38153.51061000582 36660.6870140323 36482.25861428734 36342.265703464145 1.1514614189079386 1.0264154098621139 1.0906598672764667 1.0549526887878222 1.0521482603478138 0.9492188377232639 1.1062857150258547 1.0498385246896982 1.0087617352524558 1.0038520688821515 1.0 15.14936074456061 -2.000000000000029 0.21787135070007507 0.9987631752459363 1.5905562882286763 0.3590314866247363 0.04311320321823828 35.20902948193615 0.4071005010047808 0.026253941862307423 7.4073022934659765 0.009999999999999336 2.000000000000029 0.5917931129827401 AAEDDEDDDVDTKKQKT(ph)DEDD ddPTM_A549_MK2206_60min_R1 8 AAEDDEDDDVDTKKQKTDEDD 21 3 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 AAEDDEDDDVDT(0.095)KKQKT(0.905)DEDD;AAEDDEDDDVDT(0.004)KKQKT(0.996)DEDD;AAEDDEDDDVDT(0.006)KKQKT(0.994)DEDD;AAEDDEDDDVDT(0.015)KKQKT(0.985)DEDD;AAEDDEDDDVDT(0.278)KKQKT(0.722)DEDD;AAEDDEDDDVDT(0.004)KKQKT(0.996)DEDD;AAEDDEDDDVDTKKQKT(1)DEDD;AAEDDEDDDVDT(0.022)KKQKT(0.978)DEDD 235.57 3.6113e-86 6610056900.0 36353.090000000004 53164.09999999999 53352.6 45482.9 56798.00000000001 39863.799999999996 35460.8 33743.49 64233.5 73680.0 70369.70000000001 True False 42488.60284428171 55869.925607768964 60918.80093703372 56626.21254180496 48443.08943985565 44082.16085655118 41903.568347969995 38526.73304260413 49684.71480982186 57035.636827017624 52894.96138508154 0.803263708521492 1.0562428659514342 1.1516938351374848 1.07054076719254 0.9158356140424088 0.8333905480264531 0.792203401811887 0.7283630053555571 0.9393090288526973 1.0782810939550835 1.0 15.690842681643662 -5.22853993910854 21.903280751265044 0.9538187390289882 0.8032622281270073 0.10903656758727576 0.12576995186140527 4635.561266391441 3085910.2793876408 0.017818717912728068 2.7623999398252956 5.908266287712918e-06 5.22853993910854 -0.15055651090198086 AAEDDEDDDVDTKKQKT(ph)DEDD ddPTM_A549_PD325901_60min_R1 5 AAEDDEDDDVDTKKQKTDEDD 21 3 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 AAEDDEDDDVDTKKQKT(1)DEDD;AAEDDEDDDVDTKKQKT(1)DEDD;AAEDDEDDDVDT(0.003)KKQKT(0.997)DEDD;AAEDDEDDDVDTKKQKT(1)DEDD;AAEDDEDDDVDT(0.081)KKQKT(0.919)DEDD 249.78 2.8864999999999992e-98 9946213000.0 67568.6 67049.2 76274.0 80257.4 79614.2 101315.8 94201.0 99281.6 85071.5 95470.0 89356.1 True False 74428.11453062575 72699.67139318786 81450.41231282218 85214.71732021977 74022.37324607969 100490.71771594654 97785.87060376497 97301.35060309152 81496.24069911028 89442.00790698784 78365.86617498763 0.9497516988382537 0.9276956274668438 1.0393608376757668 1.0873958456598813 0.9445741731583862 1.2823276589778903 1.2478120306284026 1.2416292367115773 1.0399456380298617 1.141338854180054 1.0 16.257937775940015 -5.849909635815741 4.111503348208773 1.0685391174591052 0.9380470829588338 0.19381031611957422 0.11068243190583663 0.31541315625854416 9.820304220610389 0.01711985953566563 0.05991121573854143 1.41283148361713e-06 5.849909635815741 -0.13049203450027147 AAEEAEEAR ddPTM_A549_MK2206_60min_R1 2 AAEEAEEAR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 73.931 0.006074800000000001 1608970.0 669.79 688.52 798.33 456.59000000000003 462.71 410.86 313.89 381.89 550.89 639.69 927.5799999999999 False True 782.8341772067081 723.5627270933039 911.545198398243 568.454570497104 394.6459719482305 454.3369324932049 370.91974994202917 436.02407698907535 426.11429459056063 495.18358471600004 697.2362860943556 1.122767407290057 1.0377582772497667 1.3073691323559218 0.8152968826125842 0.5660146779779386 0.6516254841500323 0.5319857232614444 0.625360563821931 0.6111476167964319 0.7102091422834924 1.0 9.44550384301076 -6.384444613746991 5.843438434483512 0.7469343703441904 1.1418629707863313 0.666448874359653 0.1434108811018552 0.15931547788005088 6.956336344210227 0.027366371148595914 0.06434034824190758 4.126248564531946e-07 6.384444613746991 0.39492860044214084 AAEEAEEAR ddPTM_A549_PD325901_60min_R1 2 AAEEAEEAR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 117.04 0.0005096 4988200.0 1151.21 998.9300000000001 1031.42 753.47 1255.3000000000002 1206.55 945.52 759.49 1075.03 1242.5 1198.3 False True 1268.0799917239904 1083.1133368451406 1101.4183636323128 800.010130645474 1167.1320585499034 1196.724256830378 981.5022810083974 744.341376141621 1029.8502276175273 1164.0483379536236 1050.916696649559 1.2066417783319765 1.0306367196355601 1.0480548716599125 0.7612498052376525 1.1105847516466834 1.1387432140393905 0.9339486984434993 0.7082781903786145 0.9799541970365547 1.1076504366756574 1.0 10.037432599924433 AAEEAFVNDIDES(ph)SPGTEWER ddPTM_A549_PD325901_60min_R1 2 AAEEAFVNDIDESSPGTEWER 21 0 P09496-2;P09496-5 P09496-2 CLTA Clathrin light chain A 1 AAEEAFVNDIDES(0.496)S(0.4)PGT(0.103)EWER;AAEEAFVNDIDES(0.49)S(0.49)PGT(0.019)EWER 52.79 0.0029879999999999998 1035970.0 148.12 0.0 0.0 129.95 0.0 0.0 0.0 0.0 110.52 157.79 117.08 True False 163.1570333598192 0.0 0.0 137.9767163621369 0.0 0.0 0.0 0.0 105.87522874365288 147.82711247139014 102.67990223126968 1.5889870346032728 0.0 0.0 1.3437558213813539 0.0 0.0 0.0 0.0 1.0311192983529167 1.4396888705487247 1.0 6.682010017110301 -8.779553710494948 24.78768406300129 1.0146953476059577 0.3380661673022579 0.2734184732407041 0.559468300042224 217.47170735236244 297587.4620223197 0.09019017395555681 0.09610957372842979 1.6612932079713881e-09 8.779553710494948 -0.6766291803036998 AAEEEDEADPKR ddPTM_A549_MK2206_60min_R1 2 AAEEEDEADPKR 12 1 P20962 P20962 PTMS Parathymosin 0 ; 91.93700000000001 0.00027119 18234500.0 2083.82 1993.2600000000002 2484.0 2029.94 2081.7 1477.83 1721.54 1365.77 2510.8999999999996 3448.0 3193.6000000000004 False True 2435.5178714923827 2094.7084200981794 2836.26855162807 2527.2753911274694 1775.484687611314 1634.2129896958395 2034.3215340252962 1559.3720799952052 1942.1851590833724 2669.0944052600007 2400.540981123929 1.0145704200192731 0.8725984836623953 1.1815122399202425 1.0527941039124453 0.7396185699691888 0.6807686277993487 0.8474429514104068 0.6495919429232614 0.8090614467135839 1.1118720431135216 1.0 11.229143850010644 -6.740692579678319 24.96243645572833 0.8556379917845089 1.0298955247794321 0.29771939017696636 0.14261098410287584 266.078751231318 320142.8290072809 0.020468604104029613 0.04257173634407084 1.8168012512782505e-07 6.740692579678319 0.1742575329949232 AAEEEDEADPKR ddPTM_A549_PD325901_60min_R1 2 AAEEEDEADPKR 12 1 P20962 P20962 PTMS Parathymosin 0 ; 105.03 0.0001709 21432600.0 1881.9899999999998 2396.3599999999997 1944.76 2293.44 2779.3 2278.0699999999997 1872.48 1682.69 2125.79 2270.13 2561.3 False True 2073.048239352188 2598.3096672261504 2076.743108391904 2435.100580019848 2584.091556064484 2259.5181532117017 1943.7382510603722 1649.1274279052311 2036.4504389338565 2126.7936043771906 2246.276337418441 0.9228821070762213 1.1567186209210074 0.9245269933166927 1.0840610032950868 1.150388985103356 1.005895007472001 0.865315731053035 0.7341605306676158 0.9065894542940655 0.9468085332819882 1.0 11.133319703985604 -7.544430680971129 10.612759486451035 0.9287173400478145 1.0518634036616656 0.3519886832337463 0.09646474888293988 0.4579957796220888 220.21126314111228 0.015638948731452457 0.023280589688376457 2.8547581338272574e-08 7.544430680971129 0.12314606361385116 AAEEQGDDQDS(ph)EK ddPTM_A549_MK2206_60min_R1 2 AAEEQGDDQDSEK 13 0 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(1)EK;AAEEQGDDQDS(1)EK 209.39 2.5651999999999997e-37 12281700.0 5091.1 6018.1 4901.5 4586.3 3089.2 1515.6799999999998 910.63 1176.75 2022.49 7030.9 6914.9 True False 5950.353214555419 6324.3955846165845 5596.606403303131 5709.9437058868325 2634.7827722384955 1676.0682515730423 1076.0796836143556 1343.5579161457338 1564.3992442528686 5442.614806827877 5197.739488468768 1.1447963538296468 1.2167588619335987 1.076738535226564 1.0985436493218628 0.5069093551309728 0.3224609958408679 0.2070283987879054 0.2584888910124159 0.30097684728592156 1.0471118875623464 1.0 12.343668612178897 -6.742655091905413 8.046482642318654 0.5593297111019507 1.1376372886196122 0.5475335700596677 0.26692922663396834 0.13768731392265937 43.16208844946598 0.04690355275941901 0.0958892520188373 1.8086099180500763e-07 6.742655091905413 0.5783075775176615 AAEEQGDDQDS(ph)EK ddPTM_A549_PD325901_60min_R1 2 AAEEQGDDQDSEK 13 0 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(1)EK;AAEEQGDDQDS(1)EK 220.85 7.904399999999999e-39 25717000.0 5605.5 5628.5 5133.8 4909.299999999999 5969.0 4210.4 4901.0 5138.700000000001 4771.4 5384.5 4908.0 True False 6174.566233449003 6102.833448222467 5482.210540047278 5212.536311170746 5549.758031932108 4176.111898353668 5087.510236930105 5036.204597267839 4570.874650990459 5044.521751075485 4304.347114375399 1.434495422738459 1.4178302274555397 1.2736450835338355 1.2109934846477022 1.2893379377786147 0.9702079751901378 1.1819470181526823 1.1700275241390794 1.0619205490479444 1.1719597925148963 1.0 12.07157871013918 -2.000000000065959 0.2061690057985094 0.9878984238313863 3.4041798302208495 0.6379498896970863 0.08697180678900569 13.81289818437763 0.15579131346817374 0.04986330040033273 11.026860520816307 0.009999999998481243 2.000000000065959 2.416281406389463 AAEEQGDDQDS(ph)EKS(ph)KPAGSDGER ddPTM_A549_MK2206_60min_R1 1 AAEEQGDDQDSEKSKPAGSDGER 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 AAEEQGDDQDS(0.995)EKS(0.962)KPAGS(0.042)DGER 49.445 0.008720499999999999 2704600.0 634.88 669.61 486.47 694.29 928.32 696.54 579.91 807.9 1175.7 697.99 1138.2 True False 742.0322226742634 703.6902888644445 555.4587609945678 864.391081167862 791.7653577380677 770.2474004741681 685.2721405233744 922.4222990899831 909.4058272071052 540.3135742248915 855.5535272780731 0.8673124462884566 0.8224970927338953 0.6492390520108648 1.0103296329312152 0.9254422224837922 0.9002913037185355 0.8009693358445431 1.0781584900066412 1.062944395893454 0.6315368436898257 1.0 9.740714308806014 -7.563320959820648 0.6638045992274505 1.0334019864342279 0.8126052376430998 0.0 0.15411073461031452 0.5006685145674461 0.44032257067757485 0.020641936634882268 0.046476277181237355 2.7332480074818854e-08 7.563320959820648 -0.2207967487911281 AAEEQGDDQDS(ph)EKSKPAGSDGER ddPTM_A549_MK2206_60min_R1 4 AAEEQGDDQDSEKSKPAGSDGER 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(1)EKSKPAGSDGER;AAEEQGDDQDS(0.997)EKS(0.003)KPAGSDGER;AAEEQGDDQDS(0.981)EKS(0.019)KPAGSDGER;AAEEQGDDQDS(1)EKSKPAGSDGER 186.59 3.1738999999999995e-50 367271000.0 6703.6 5378.68 5835.6 5821.75 6975.23 6661.799999999999 6086.2 5772.469999999999 7705.2 8965.2 9328.0 True False 7835.00379271547 5652.431837800228 6663.175829259561 7248.079011348289 5949.182907031308 7366.747254255053 7191.983758951149 6590.735299947961 5959.984502676014 6939.955093398184 7011.600160296848 1.117434481943386 0.8061543311906312 0.9503074443676583 1.0337268021058161 0.8484772050634786 1.0506513614351862 1.025726452525876 0.9399759183742347 0.850017737238412 0.9897819234895403 1.0 12.775528012761242 -9.93894963756966 0.0015970954588276558 0.17773076979671956 1.7095519516733666 0.0 0.09420283371903553 1570265.4666871277 859.287140794523 414105.9829792225 410058.65465098363 1.1509338478471637e-10 9.93894963756966 1.531821181876647 AAEEQGDDQDS(ph)EKSKPAGSDGER ddPTM_A549_PD325901_60min_R1 4 AAEEQGDDQDSEKSKPAGSDGER 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(0.999)EKS(0.001)KPAGSDGER;AAEEQGDDQDS(1)EKSKPAGSDGER;AAEEQGDDQDS(0.832)EKS(0.144)KPAGS(0.024)DGER;AAEEQGDDQDS(1)EKSKPAGSDGER 263.55 3.774099999999999e-124 494296000.0 14021.1 14092.7 14701.9 14034.1 16197.1 12336.5 13308.3 15265.7 14584.4 13483.8 16417.300000000003 True False 15444.51175021172 15280.341287334955 15699.659343706628 14900.954483246374 15059.471572961567 12236.03563415354 13814.754639081186 14961.213637790015 13971.468386617189 12632.4305668403 14398.076177839295 1.0726788467741988 1.0612765968590716 1.0903997971528068 1.0349267707154572 1.0459363728148803 0.8498382341514872 0.9594861472079218 1.0391119933659936 0.9703705004784794 0.8773693381539002 1.0 13.813588436070631 -7.023828463108526 24.988196982048258 0.9781270169501979 1.0631491235104162 0.4716710825145449 0.054646620397645354 535.2086190248062 561257.052353052 0.006768661467040403 0.011769110322594211 9.466109783209045e-08 7.023828463108526 0.08502210656021836 AAEEQGDDQDS(ph)EKSKPAGSDGERR ddPTM_A549_MK2206_60min_R1 3 AAEEQGDDQDSEKSKPAGSDGERR 24 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(0.843)EKS(0.138)KPAGS(0.019)DGERR;AAEEQGDDQDS(0.804)EKS(0.118)KPAGS(0.078)DGERR;AAEEQGDDQDS(0.97)EKS(0.029)KPAGS(0.001)DGERR 122.68 6.6779e-17 36125300.0 1825.08 2697.52 2770.94 1942.3899999999999 3538.18 1852.51 2353.63 1521.51 3896.5 4336.17 3878.0400000000004 True False 2133.108885078039 2834.8122459605092 3163.9009583125126 2418.2756371972005 3017.718408998703 2048.5413786033846 2781.2541051198104 1737.1887019289527 3013.9489714318993 3356.626185399144 2915.0156395409085 0.7317658458305858 0.9724861189447921 1.0853804402952711 0.8295926801881788 1.0352323219349757 0.7027548500309293 0.9541129273521961 0.595944899356542 1.033939211354136 1.1514950862931856 1.0 11.509287908406069 AAEEQGDDQDS(ph)EKSKPAGSDGERR ddPTM_A549_PD325901_60min_R1 4 AAEEQGDDQDSEKSKPAGSDGERR 24 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(0.394)EKS(0.303)KPAGS(0.303)DGERR;AAEEQGDDQDS(0.967)EKS(0.027)KPAGS(0.006)DGERR;AAEEQGDDQDS(0.97)EKS(0.003)KPAGS(0.027)DGERR;AAEEQGDDQDS(0.992)EKS(0.006)KPAGS(0.002)DGERR 137.35 1.4188e-23 61821200.0 6521.8 6582.6 4946.43 5695.349999999999 7996.9 7932.700000000001 7032.6 8076.5 7319.1 7782.400000000001 8857.8 True False 7183.8883349045955 7137.338803636705 5282.124485099939 6047.138834421673 7435.225331807317 7868.098721278304 7300.229441386384 7915.407871608322 7011.503679855864 7291.017935847309 7768.346754220533 0.9247641180540246 0.9187719124096769 0.6799547770225586 0.7784331757765924 0.9571181059557838 1.0128408231781847 0.9397404199832067 1.0189308126993548 0.9025734691936251 0.9385546457341272 1.0 12.923391884161363 -6.774040668288124 24.550195979430608 0.9616101129654029 0.8217499102934159 0.4851161767034289 0.07000439797590387 126.1438408806646 245757.3805327131 0.010758743142290535 0.020434556503788462 1.682516499156953e-07 6.774040668288124 -0.13986020267198696 AAEEQGDDQDSEKS(ph)KPAGSDGERR ddPTM_A549_MK2206_60min_R1 1 AAEEQGDDQDSEKSKPAGSDGERR 24 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(0.299)EKS(0.402)KPAGS(0.299)DGERR 123.14 1.0092000000000001e-16 6242200.0 786.97 918.93 742.79 685.54 950.19 516.62 485.22 469.89 1039.2 1280.7 1140.0 True False 919.7912964307676 965.6996119326235 848.1287912495219 853.49733077506 810.4183097090817 571.2883854953983 573.3781932105873 536.4983464777722 803.8228592613964 991.388980515221 856.9065376006013 1.0733857848794666 1.1269602571088446 0.9897564717201742 0.9960214951386797 0.9457487767316026 0.6666869260853653 0.6691257074734038 0.6260873536803738 0.9380519624837466 1.156939452569915 1.0 9.74299404861285 -6.281311808944265 1.6024307123298625 0.8969639185277171 1.093289653230057 0.2436868548393526 0.15592191008720127 0.5433974969221784 2.617091354785914 0.0243932176772753 0.08957976518371583 5.232246438658958e-07 6.281311808944265 0.19632573470233983 AAEHDLEVAS(ph)EEEQER ddPTM_A549_MK2206_60min_R1 1 AAEHDLEVASEEEQER 16 0 E7ESJ3;Q9UPS8 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 AAEHDLEVAS(1)EEEQER 49.606 0.006910899999999999 987540.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AAEHDLEVAS(ph)EEEQER ddPTM_A549_PD325901_60min_R1 2 AAEHDLEVASEEEQER 16 0 E7ESJ3;Q9UPS8 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 AAEHDLEVAS(1)EEEQER;AAEHDLEVAS(1)EEEQER 58.672 0.002003 2001870.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AAEPHFGT(ph)LPK ddPTM_A549_MK2206_60min_R1 4 AAEPHFGTLPK 11 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 AAEPHFGT(1)LPK;AAEPHFGT(1)LPK;AAEPHFGT(1)LPK;AAEPHFGT(1)LPK 89.23100000000001 0.00026931 45090000.0 5031.26 4690.47 5030.68 3494.88 5822.6 5113.85 4373.29 4202.1 7125.5 6620.3 7524.0 True False 5880.413685502956 4929.194888382802 5744.106069768232 4351.125756891127 4966.103253151578 5654.994212701103 5167.860184217323 4797.760543391533 5511.585627085335 5124.769632001966 5655.583148163967 1.0397537320995762 0.8715626239149219 1.0156523066296008 0.7693505060222976 0.8780886290680349 0.9998958665362288 0.9137625685681982 0.8483228727614202 0.974538872949754 0.9061434511250489 1.0 12.46546007308394 -8.960584871591525 15.731466423657201 0.9887701638425437 0.915007696160712 0.02541089841342603 0.07906563616968952 4.245389640051037 1693.9785395566907 0.012367202930356761 0.01310135303857053 1.0950025446114099e-09 8.960584871591525 -0.0737624676818317 AAEPHFGT(ph)LPK ddPTM_A549_PD325901_60min_R1 2 AAEPHFGTLPK 11 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 AAEPHFGT(1)LPK;AAEPHFGT(1)LPK 91.62 0.00026324 85257000.0 4112.4 4230.7 4601.200000000001 4454.0 5545.1 4761.9 4918.5 4944.6 4693.200000000001 5363.0 5454.8 True False 4529.887820611129 4587.235936642943 4913.465101263305 4729.11346423207 5155.631305556498 4723.120665202911 5105.676209006475 4845.97607403634 4495.96112504263 5024.379264744696 4783.894180826184 0.9469038505840889 0.9588915981939052 1.0270848215991983 0.9885489280231835 1.0777059672892084 0.9872962249318029 1.0672636174667054 1.0129772714160317 0.9398119931378105 1.0502697331563844 1.0 12.223969762307272 -8.727492433118258 24.9367783954348 0.9715778788481197 1.0102269501446164 0.0 0.046464588514197366 257.12400206124556 188878.27138609134 0.007221803777540255 0.008188541346553894 1.8728697144710424e-09 8.727492433118258 0.03864907129649664 AAES(ph)AEIEPR ddPTM_A549_MK2206_60min_R1 2 AAESAEIEPR 10 0 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 AAES(1)AEIEPR;AAES(1)AEIEPR 131.83 1.0649e-06 7578200.0 1419.42 1704.23 1555.6599999999999 1439.96 2246.87 1336.37 1330.73 1471.07 2460.1 2502.2 2440.8 True False 1658.9833945128278 1790.9680276451245 1776.275980284107 1792.7502646422606 1916.358399410692 1477.7837863893888 1572.5064157518764 1679.59867746293 1902.8912779724408 1936.9512821466267 1834.681997346971 0.9042348466446987 0.9761735440991633 0.9681655910139623 0.9771449587637828 1.0445180157552254 0.8054713506353295 0.8571002593505513 0.9154712805225657 1.037177712935595 1.0557422403160555 1.0 10.84131430925204 -8.760358961159401 24.99986892357086 1.0175561447841328 0.9324471047126642 0.33171612045247145 0.06236338317016821 28.667711852244764 663341.8235863706 0.011111554062282319 0.012253057383074828 1.7363650626997086e-09 8.760358961159401 -0.08510904007146858 AAES(ph)AEIEPR ddPTM_A549_PD325901_60min_R1 4 AAESAEIEPR 10 0 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 AAES(1)AEIEPR;AAES(1)AEIEPR;AAES(1)AEIEPR;AAES(1)AEIEPR 134.75 7.2622e-07 11130190.0 2200.44 1960.38 1926.71 2045.6799999999998 2338.81 1860.57 1637.9 1672.85 2500.58 1883.6599999999999 2538.8599999999997 True False 2423.827048921687 2125.588102554207 2057.4681268484346 2172.0370075236337 2174.5400540564806 1845.4181347900173 1700.2311807932708 1639.4836944245615 2395.489318601189 1764.725386132573 2226.596315159559 1.0885794755067646 0.9546355969792785 0.9240418269087972 0.9754965427435304 0.9766207009556881 0.828806785597224 0.7636010035664824 0.7363183363155236 1.0758525478065957 0.7925663822030138 1.0 11.120624303987338 AAES(ph)ETPGKSPEK ddPTM_A549_MK2206_60min_R1 1 AAESETPGKSPEK 13 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.435)ET(0.394)PGKS(0.17)PEK 59.261 0.0027155 6136600.0 2133.2 2748.9 2440.3 2769.6 3481.7 2827.0 2490.4 3440.4 4628.5 4619.8 5031.5 True False 2493.232008267293 2888.8072684987847 2786.3712345160943 3448.152124332069 2969.5465421801 3126.151263589275 2942.873443740256 3928.087235783114 3580.1521401957034 3576.183971409556 3782.0396876644068 0.6592294672103203 0.7638225685259171 0.7367377036270114 0.9117175939688434 0.7851706453175639 0.8265781223252645 0.7781180756349025 1.0386160802582425 0.9466194000747309 0.9455701861283278 1.0 11.884948787266579 -4.588875611211802 0.18787092684884316 1.0305431093992363 0.2850688202911272 0.6597436889320657 0.06737661656409562 7.751658122094048 0.19588264910029135 0.0742135338798793 1.4138657314266139 2.5770591616921298e-05 4.588875611211802 -0.7454742891081092 AAES(ph)PDQKDTDGGPKEEES(ph)PV ddPTM_A549_PD325901_60min_R1 1 AAESPDQKDTDGGPKEEESPV 21 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 2 AAES(1)PDQKDT(0.018)DGGPKEEES(0.983)PV 95.212 1.1357e-06 9430800.0 3094.3 3390.1 2853.0 3031.8 3412.5 3719.3 3035.8 3588.7 3242.4 3461.2 3993.4 True False 3408.4310580967344 3675.7956245569862 3046.6217364827016 3219.067400282621 3172.8177724858983 3689.0112539299857 3151.3290302535 3517.120563219314 3106.1332037497277 3242.6592413079134 3502.237116248312 0.9732153891818539 1.0495564699213156 0.8699073293319222 0.9191460467790856 0.9059403082006919 1.0533299521083688 0.8998045893675202 1.0042496971155812 0.8868997445487354 0.9258822671554389 1.0 11.774061048289338 -5.739558249958305 24.98443216997527 0.9450633155377277 1.011385903146628 0.18734132931608227 0.05625165636891263 332.16869591198156 379272.5918853939 0.007982813866936268 0.0308655079139797 1.8215527400606744e-06 5.739558249958305 0.0663225876089002 AAES(ph)PDQKDTDGGPKEEESPV ddPTM_A549_MK2206_60min_R1 2 AAESPDQKDTDGGPKEEESPV 21 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 AAES(0.999)PDQKDT(0.001)DGGPKEEESPV;AAES(0.924)PDQKDT(0.062)DGGPKEEES(0.015)PV 216.82 5.8820999999999995e-68 307360000.0 9432.1 12124.5 9532.6 8880.7 15645.1 11807.3 9334.0 10206.800000000001 15360.6 15376.2 16112.3 True False 11024.007887295122 12741.585262073375 10884.466020631937 11056.471898669775 13343.726514938644 13056.740648948582 11029.866978747012 11653.645157014034 11881.448625837771 11902.705740765316 12111.171233142244 0.9102346647637103 1.0520522761007625 0.8987129164557243 0.9129151661578129 1.1017701143902177 1.0780741513437433 0.9107184405554236 0.9622228051011129 0.9810321724561339 0.9827873383701766 1.0 13.564050769812003 AAES(ph)PDQKDTDGGPKEEESPV ddPTM_A549_PD325901_60min_R1 2 AAESPDQKDTDGGPKEEESPV 21 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 AAES(1)PDQKDTDGGPKEEESPV;AAES(1)PDQKDTDGGPKEEESPV 204.05 2.2700999999999996e-56 383500000.0 28699.7 30284.0 30396.3 28485.1 33325.0 32679.8 31042.4 31707.1 29769.4 33694.0 32896.5 True False 31613.27241639754 32836.138961707235 32459.175705800604 30244.559932644133 30984.3669650088 32413.66654375315 32223.735519053076 31074.67701676125 28518.295643877136 31566.555089745973 28850.439048094988 1.0957639973414888 1.1381504075888726 1.1250842890705992 1.0483223455360622 1.0739651799876064 1.1235068724506445 1.1169235749007025 1.0770954634332723 0.9884874055585722 1.0941447039028798 1.0 14.816305653626088 -8.671900494524394 4.001148206349781 0.9944218326647555 1.1025026620817746 0.3448672771999256 0.03854161129318362 0.07070593955513131 2.1460922985944753 0.004403348833488076 0.004956216805567269 2.1286267006916294e-09 8.671900494524394 0.10808082941701913 AAES(ph)VY(ph)S(ph)RVIQVKK ddPTM_A549_MK2206_60min_R1 1 AAESVYSRVIQVKK 14 2 Q9Y487;F5H5F3;Q8TBM3 Q9Y487 ATP6V0A2 V-type proton ATPase 116 kDa subunit a isoform 2;V-type proton ATPase subunit a 3 AAES(1)VY(1)S(1)RVIQVKK 42.277 0.023661 23330000.0 2295.0 2675.9 2790.3 2959.2 1940.2 1516.0 1901.1 1355.2 2313.8 3602.3 3411.8 True False 2682.3398926370905 2812.091880306993 3186.0064974266493 3684.2041328435334 1654.7991501673987 1676.422113760645 2246.505261763011 1547.3037501259387 1789.7279943793476 2788.5379280939956 2564.5558991102907 1.0459276374391613 1.0965219675198263 1.2423228904980996 1.4365856225328046 0.6452575866026123 0.6536890517154406 0.8759821778664993 0.6033417913264193 0.6978705338418435 1.087337549967778 1.0 11.324493302454329 -6.7680211319726125 24.999994658816817 0.8082595068768368 1.2002085237689266 0.5750259102366972 0.16951148131056973 92.13260655080516 349956.050934672 0.025564081670913393 0.049120758662035545 1.705999376184168e-07 6.7680211319726125 0.39194901689208983 AAESET(ph)PGKS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 AAESETPGKSPEK 13 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 2 AAES(0.427)ET(0.578)PGKS(0.995)PEK 58.83 0.005667800000000001 11658000.0 2351.1 2470.7 1921.0 2203.9 3426.8 2890.0 2457.3 2632.5 3345.2 3069.3 3698.3 True False 2747.9082011237756 2596.4480767870596 2193.4266858605147 2743.8555989368324 2922.722259454512 3195.817881773261 2903.7596021935956 3005.664936693131 2587.517541186704 2375.9429982785714 2779.9100421125454 0.9884881738962853 0.9340043517429553 0.789027937103194 0.9870303561519875 1.0513729635774252 1.149611977855461 1.044551643112499 1.0812094244636157 0.930791824911127 0.8546834114362254 1.0 11.440822482755486 -6.491008130691988 24.436676564376597 1.0008938463293144 0.9037186443652956 0.23570701452193665 0.08558433289851099 604.6616169253372 463621.3683792266 0.011763462013523822 0.027310043789299313 3.228433679670051e-07 6.491008130691988 -0.09717520196401885 AAESET(ph)PGKS(ph)PEKKPK ddPTM_A549_PD325901_60min_R1 1 AAESETPGKSPEKKPK 16 3 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 2 AAES(0.19)ET(0.827)PGKS(0.983)PEKKPK 47.088 0.008708200000000001 34866000.0 3131.8 2982.6 3281.4 3343.5 4203.4 4120.4 3768.8 3772.6 3389.2 4238.4 4007.7 True False 3449.7380304906933 3233.9541694356117 3504.095536661177 3550.020401360561 3908.167684942774 4086.8448285142645 3912.2237463664924 3697.352533452551 3246.76371026048 3970.786700670131 3514.7783069034786 0.9814951980655401 0.9201018917988961 0.9969606133560915 1.0100268328127162 1.111924378634814 1.1627603426614912 1.1130783806996816 1.0519447346623465 0.9237463722486897 1.129740300510844 1.0 11.779217979474128 -4.093291472957701 16.049120732876297 1.0005751322464436 1.0192961607471795 0.0 0.0871401846833199 0.0 0.0 0.01204639841861002 0.0 8.066934432524175e-05 4.093291472957701 0.01872102850073598 AAESET(ph)PGKSPEKKPK ddPTM_A549_MK2206_60min_R1 2 AAESETPGKSPEKKPK 16 3 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.104)ET(0.595)PGKS(0.302)PEKKPK;AAES(0.026)ET(0.95)PGKS(0.024)PEKKPK 54.805 0.0031859 8776100.0 1127.26 3515.2 1427.15 4350.5 2724.1 1271.71 1670.13 1367.78 6897.2 3671.0 2398.3 True False 1317.5139291390356 3694.1086653668476 1629.541329893719 5416.372695301369 2323.3884985934496 1406.2815081072226 1973.571002487115 1561.6670036505718 5334.995212565149 2841.7185503797723 1802.7359202872995 0.7308413363888956 2.0491679473375792 0.903926810108727 3.0045291905195795 1.288812450257925 0.780081814691475 1.0947643413975963 0.8662760785294006 2.95938809036152 1.5763365662159168 1.0 10.81597235897223 AAESET(ph)PGKSPEKKPK ddPTM_A549_PD325901_60min_R1 1 AAESETPGKSPEKKPK 16 3 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.093)ET(0.562)PGKS(0.346)PEKKPK 61.102 0.0017839000000000002 102100000.0 2530.6 2226.2 2309.6 2280.2 2205.4 2579.5 2572.7 2751.7 2327.5 2673.8 2569.1 True False 2787.5046490707437 2413.80968684958 2466.3433447530474 2421.04277529007 2050.5003122169664 2558.4934072304995 2670.6055063354593 2696.8151848331095 2229.683269099277 2504.9758116864373 2253.1169868667134 1.237177059743877 1.0713201759693505 1.0946361680859085 1.074530434683235 0.9100727233291535 1.1355350930039618 1.1852937605558265 1.1969263915512096 0.9895994225315284 1.111782400242772 1.0 11.13770650812924 -8.796696683972165 24.904446593758063 0.9950885684595586 1.106262142536989 0.09257641948632112 0.08892623835285306 164.5984883109146 116265.507647946 0.01447900013230418 0.015413828500416326 1.5969941160385322e-09 8.796696683972165 0.11117357407743034 AAESETPGKS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 AAESETPGKSPEK 13 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAESETPGKS(1)PEK;AAESETPGKS(1)PEK 227.47 2.6595999999999997e-46 146659000.0 11267.5 10914.3 10004.3 8634.8 12619.8 9881.6 9779.3 11080.400000000001 12920.7 12063.5 12654.2 True False 13169.178536073383 11469.791251255516 11423.060173531683 10750.326387630901 10763.444137347973 10927.26435312479 11556.072224690442 12651.080632301844 9994.1820801181 9338.34697153538 9511.812901846948 1.3845077349572623 1.2058470209215721 1.2009340691839745 1.130207931817442 1.1315870327157076 1.1488098500132398 1.2149179492845734 1.3300388435778978 1.0507126436620182 0.9817631052984773 1.0 13.215504622092977 -2.0000000000004956 0.0383213893494658 0.3937217985157518 2.4151233256279405 0.5189600616476949 0.08291488845289323 383.04421482975 1.0885847793941144 15.952111718940552 50.756968573596126 0.009999999999988587 2.0000000000004956 2.0214015271121886 AAESETPGKS(ph)PEK ddPTM_A549_PD325901_60min_R1 4 AAESETPGKSPEK 13 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAESETPGKS(1)PEK;AAESETPGKS(1)PEK;AAESETPGKS(1)PEK;AAES(0.009)ET(0.049)PGKS(0.942)PEK 268.38 7.149699999999999e-83 4401660000.0 76066.0 75446.0 76200.0 68415.0 87779.0 68079.8 80647.0 74167.0 74787.0 72526.0 77091.0 True False 83788.16432317063 81804.09919776011 81371.390227824 72640.83916826152 81613.70586111053 67525.38068058576 83716.06571673174 72687.68100211413 71643.9624687982 67946.69598263533 67609.29572011287 1.2392994695586623 1.2099534291321492 1.2035532889542744 1.0744208824327661 1.2071373468963904 0.9987588239363637 1.238233068767603 1.075113713697368 1.059676213244225 1.0049904419049003 1.0 16.044933998354583 -2.0000000000006026 0.10422943725681877 0.9228261340613815 1.8590852318971096 0.5479429064320114 0.06440293663408107 50.226698540791716 0.35684516458600324 0.33446543055931977 6.770451450218366 0.009999999999986124 2.0000000000006026 0.9362590978357281 AAESETPGKS(ph)PEKK ddPTM_A549_PD325901_60min_R1 3 AAESETPGKSPEKK 14 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.016)ET(0.067)PGKS(0.916)PEKK;AAES(0.004)ET(0.003)PGKS(0.994)PEKK;AAES(0.001)ET(0.051)PGKS(0.947)PEKK 76.586 0.00015978 113009700.0 19054.199999999997 17767.5 16632.800000000003 17272.8 21582.7 19517.5 17853.199999999997 17927.4 19574.9 19897.8 25715.5 True False 20988.568357039338 19264.82958004668 17761.601829151597 18339.701626625003 20066.80560827294 19358.555951006492 18532.61329564589 17569.82394322677 18752.235026548413 18641.449512220206 22552.656523985446 0.9306472758416441 0.8542155359639313 0.7875614036981224 0.813194738594106 0.88977569391576 0.8583714264622472 0.8217485720999601 0.7790578428993817 0.8314867477631662 0.826574443343047 1.0 14.461009761067743 -10.591962529731813 0.8574212905670393 1.0011277268545116 0.8386934222671372 0.0 0.06512085147585196 0.2974233032485408 0.38707352203172213 0.03028708297981045 0.008128925504570644 2.55880664733267e-11 10.591962529731813 -0.1624343045873744 AAESETPGKS(ph)PEKKPK ddPTM_A549_MK2206_60min_R1 7 AAESETPGKSPEKKPK 16 3 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.021)ET(0.146)PGKS(0.833)PEKKPK;AAES(0.003)ET(0.127)PGKS(0.871)PEKKPK;AAES(0.022)ET(0.123)PGKS(0.855)PEKKPK;AAES(0.002)ET(0.053)PGKS(0.945)PEKKPK;AAES(0.129)ET(0.129)PGKS(0.741)PEKKPK;AAESET(0.003)PGKS(0.997)PEKKPK;AAES(0.008)ET(0.049)PGKS(0.943)PEKKPK 120.92 1.6276e-08 1974992000.0 17595.4 20623.100000000002 18955.1 17590.0 24647.9 18898.6 18118.8 18135.3 25425.899999999998 28645.199999999997 26512.6 True False 20565.07335377197 21672.727701617838 21643.21820570256 21899.550789645094 21022.22656087569 20898.437308124598 21410.751426453957 20706.034312026964 19666.974246819038 22174.229425044578 19928.789709464636 1.0319278618312255 1.087508474803413 1.0860277277863846 1.0988901538383187 1.054867198026168 1.0486556189711538 1.0743628558780718 1.0390010940901844 0.9868624504316358 1.1126731602026756 1.0 14.282566476421216 -8.56632149227486 3.1130344170727726 0.9937633345701283 1.0699148270253294 0.0 0.040276838499825725 0.08364266079291864 1.6618621447418032 0.0032377521860480025 0.0037417317551742767 2.714429132595288e-09 8.56632149227486 0.07615149245520103 AAESETPGKS(ph)PEKKPK ddPTM_A549_PD325901_60min_R1 7 AAESETPGKSPEKKPK 16 3 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.003)ET(0.183)PGKS(0.814)PEKKPK;AAES(0.001)ET(0.003)PGKS(0.996)PEKKPK;AAES(0.179)ET(0.161)PGKS(0.66)PEKKPK;AAES(0.044)ET(0.043)PGKS(0.913)PEKKPK;AAES(0.006)ET(0.004)PGKS(0.99)PEKKPK;AAES(0.001)ET(0.028)PGKS(0.972)PEKKPK;AAES(0.026)ET(0.14)PGKS(0.834)PEKKPK 117.55 2.5085000000000003e-08 1716999500.0 24174.219999999998 23637.399999999998 25029.36 25239.100000000002 27548.3 27025.1 28083.9 28934.16 28038.1 29000.100000000002 29958.7 True False 26628.369018279805 25629.406653462516 26728.00288336862 26798.061884845014 25613.402444475676 26805.016545743347 29152.648182599743 28357.0454803906 26859.7561621192 27169.028736811957 26273.969823846415 1.013488604760128 0.9754676139652528 1.017280717857494 1.019947197340652 0.9748584860301086 1.0202118950983552 1.1095638907273397 1.079282867054737 1.022295311374725 1.0340663751601473 1.0 14.681346578212091 -7.500043122746973 24.67195384213087 1.0255850954536558 1.000544685974228 0.20156277327388816 0.03409342548988948 1397.4063516051588 1509781.4660458416 0.005950345008812749 0.009466479827594826 3.161963681209053e-08 7.500043122746973 -0.025040409479427872 AAESLTAIPEPAS(ph)PQLLETPIHASQIQK ddPTM_A549_MK2206_60min_R1 1 AAESLTAIPEPASPQLLETPIHASQIQK 28 0 Q14676;Q14676-2;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 AAES(0.006)LT(0.006)AIPEPAS(0.909)PQLLET(0.079)PIHAS(0.001)QIQK 44.711000000000006 0.010848 981800.0 311.82 159.56 0.0 394.08 470.62 299.57 325.2 220.91 335.84 446.08 339.61 True False 364.44759273293994 167.68092246413693 0.0 490.62961769092334 401.39242142654416 331.2702985615279 384.28463054301767 252.22466900850137 259.7727762262772 345.31021818398483 255.27546424082465 1.4276640092176005 0.656862667796182 0.0 1.9219615138103034 1.572389350540458 1.2976973699634933 1.5053723697491228 0.9880490072111074 1.0176174862665603 1.3526964654081373 1.0 7.995911069787088 -4.959968177332633 18.81920841437829 1.068395442235681 3.46505599995952 0.015098548824322267 0.4891068067667801 88.95526317051495 118157.92624789031 0.06382713181547256 14335.062915964825 1.0965585428682139e-05 4.959968177332633 2.3966605577238393 AAESPDQKDTDGGPKEEES(ph)PV ddPTM_A549_MK2206_60min_R1 2 AAESPDQKDTDGGPKEEESPV 21 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 AAESPDQKDTDGGPKEEES(1)PV;AAESPDQKDTDGGPKEEES(1)PV 131.57 5.327899999999999e-18 197264000.0 3821.0 4258.0 4513.1 4392.1 5303.7 3887.5 4440.6 3839.7000000000003 6221.0 6347.7 7311.6 True False 4465.891385519091 4474.714012611527 5153.125442976103 5468.1646971688615 4523.532755768907 4298.872669686347 5247.399539942572 4383.989233588078 4811.953432895639 4913.750161330884 5495.927930105749 0.8125818683057516 0.814187170850588 0.9376260949034952 0.9949483993804203 0.8230698825197056 0.7821923293676871 0.9547795398113246 0.7976795346193203 0.8755488598270339 0.8940710693119183 1.0 12.424147370411848 -10.44308717362658 0.7604757144899987 1.001512653243425 0.8671929560882705 0.09373080999029548 0.07329202462803427 0.6131330519372191 0.6343548703469536 0.04704074596097918 0.01337855173899894 3.605062732476393e-11 10.44308717362658 -0.13431969715515457 AAESPDQKDTDGGPKEEES(ph)PV ddPTM_A549_PD325901_60min_R1 2 AAESPDQKDTDGGPKEEESPV 21 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 AAESPDQKDTDGGPKEEES(1)PV;AAESPDQKDTDGGPKEEES(1)PV 164.7 1.6465e-28 287720000.0 16959.2 18137.8 18277.2 18977.8 21654.1 21183.4 19579.0 20646.5 19940.9 20436.4 23382.0 True False 18680.885499296834 19666.33606061463 19517.600701732084 20150.015604289034 20133.19071858956 21010.889413733883 20324.089559039894 20234.689360634093 19102.853319347698 19146.042216302158 20506.162230710164 0.9109888671084546 0.9590451806317125 0.951791977559916 0.9826322145307247 0.981811735032407 1.0246134394795647 0.9911210752347606 0.9867614004501772 0.9315664776483207 0.9336726200102385 1.0 14.323769893366467 -4.953517874182049 1.1445379795092208 0.9754918378993894 0.8404949955236009 0.3520684200916402 0.026157711578596317 3.0189008554179715 2.010699834565487 0.004468642199832551 0.5764530388492863 1.112966585688011e-05 4.953517874182049 -0.13499684237578857 AAESPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 AAESPSPR 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 AAES(0.254)PS(0.746)PR;AAES(0.049)PS(0.951)PR 55.235 0.02129 15468000.0 2111.46 2279.73 1991.9900000000002 1954.8899999999999 1685.3600000000001 1553.03 1486.11 2067.41 2400.97 3021.4 3050.1 True False 2467.822827759263 2395.758519485878 2274.484135329144 2433.838137758345 1437.445776582892 1717.3706037821194 1756.1169504805791 2360.4716986775866 1857.154128561235 2338.8636415465676 2292.6759915224497 1.0763940639167713 1.0449616641621375 0.9920652302110838 1.0615709096086259 0.6269729267886464 0.7490681675615667 0.7659682209671638 1.0295705574646494 0.8100377617371014 1.020145738078518 1.0 11.16281676759969 AAESPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AAESPSPR 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 AAES(0.14)PS(0.86)PR;AAES(0.135)PS(0.865)PR 52.278 0.027458 36876000.0 1790.38 1662.35 1542.6100000000001 1383.52 1753.73 1651.18 1512.9099999999999 1521.8200000000002 1685.28 1931.1999999999998 1898.88 True False 1972.138059591906 1802.4420685178316 1647.3007910675017 1468.9768881981042 1630.5540548400568 1637.733337526985 1570.4846179461185 1491.466106255306 1614.4535423190666 1809.2637024193457 1665.3297979920858 1.1842327339423961 1.082333403684402 0.9891739120105086 0.8820936789633337 0.9791178040566146 0.9834288316354068 0.9430472089310337 0.8955980419335497 0.9694497415861042 1.0864296697271636 1.0 10.701592198181817 -5.543790342450996 2.33616467756929 0.9687559329424253 1.185816920513005 0.6286470856122796 0.05131326154783579 0.13798474467070682 1.277626719618368 0.005757944611927222 0.04730012445375903 2.858970390668464e-06 5.543790342450996 0.21706098757057957 AAET(ph)SDDDLIPFGDRPTVSR ddPTM_A549_PD325901_60min_R1 1 AAETSDDDLIPFGDRPTVSR 20 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 AAET(0.538)S(0.462)DDDLIPFGDRPTVSR 88.836 1.7909e-06 9990600.0 2169.3 1789.3 2020.6 2271.6 2793.8 1964.2 2143.3 2448.1 2419.3 2608.8 2761.6 True False 2389.5257390457455 1940.090590548895 2157.7300668548696 2411.911572822088 2597.57312608677 1948.2042064284344 2224.864454358763 2399.2707250027024 2317.6252343423766 2444.0799227794064 2421.9407072247536 0.9866161181888917 0.8010479301832292 0.8909095340023262 0.9958590504000581 1.0725172248594268 0.8043979774636337 0.9186287871217889 0.9906397451620407 0.9569289732935248 1.00914110551452 1.0 11.241947830767867 -6.925419803366031 0.012361442868202375 1.8633228226238086 3.6457559020966556e-06 0.12397602898159654 0.07674916964200618 2550.332505473124 8.781431823092717 630.2123194675257 693.754586204714 1.1873539370730302e-07 6.925419803366031 -1.8633191768679065 AAETS(ph)DDDLIPFGDRPTVSR ddPTM_A549_MK2206_60min_R1 2 AAETSDDDLIPFGDRPTVSR 20 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 AAET(0.115)S(0.885)DDDLIPFGDRPTVSR;AAET(0.141)S(0.859)DDDLIPFGDRPTVSR 99.999 2.6049999999999998e-08 5774000.0 964.21 1047.53 1355.57 1021.24 1610.44 1315.56 1032.6200000000001 1138.82 1636.6799999999998 1482.5500000000002 1863.54 True False 1126.9450753288054 1100.8448026376125 1547.8102095533245 1271.4438458452057 1373.5464093369674 1454.7716860019484 1220.233687550219 1300.2512224899806 1265.9745932408994 1147.6409253243075 1400.7715869124777 0.8045173716100072 0.7858845888386762 1.1049697352620802 0.907673926087885 0.9805641563336397 1.0385502530134092 0.8711153902256165 0.9282392894304347 0.9037694689619653 0.819291978825677 1.0 10.452006010385006 -2.0000026754436306 0.011181370527546452 1.7344419539056677 1.0078658248182928e-05 0.0 0.09914401666754315 16135.907883632632 13.563005915442865 886.6518567785179 1246.1122173524232 0.009999938395823544 2.0000026754436306 -1.7344318752474195 AAEVLNK ddPTM_A549_PD325901_60min_R1 1 AAEVLNK 7 0 A0A087X0X3;P52272-2;P52272;M0R019;M0R2T0;M0QYQ7;M0R0N3 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 79.469 0.045169 2600900.0 2404.6 2567.4 2228.1 2351.2 2836.8 2667.6 2801.7 2435.9 2659.7 2853.6 3058.2 False True 2648.713221827041 2783.7638082910844 2379.312264653734 2496.4282840373708 2637.552954428715 2645.875950039962 2908.3202266490657 2387.314063573418 2547.9220583558945 2673.423209001576 2682.0607875270657 0.9875664392637528 1.0379197299468337 0.8871209316801226 0.9307873615866651 0.9834053600480144 0.9865085692108913 1.0843602949546187 0.890104383418762 0.9499866931446953 0.9967794993440646 1.0 11.389126220215445 AAEVVASAMRPGPES(ph)PSTR ddPTM_A549_PD325901_60min_R1 1 AAEVVASAMRPGPESPSTR 19 1 A0A1B0GV70;Q96N21-2 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 AAEVVASAMRPGPES(0.879)PS(0.12)T(0.001)R 186.35 4.5618e-44 14926000.0 3613.6 3532.4 3604.8 2997.8 4265.3 4515.8 3179.5 4491.3 3416.3 3493.0 4321.2 True False 3980.4500118082815 3830.087744958876 3849.4434054233607 3182.967297502225 3965.7200424861826 4479.02482200872 3300.497612389161 4401.717498143313 3272.7247915032676 3272.451383880889 3789.7197943437172 1.0503283165550221 1.0106519618351228 1.0157593738642057 0.8398951559038506 1.046441493749789 1.18188812499906 0.8709080859527566 1.1614889060434026 0.8635796230602374 0.8635074785120345 1.0 11.887875466500349 -8.812430596083644 24.99994955862158 0.9355793430012376 1.0165894585101818 0.17887399267782667 0.10329015164928707 168.40241938693012 82563.41311858087 0.017710921116854315 0.0188547223831154 1.5401726389543943e-09 8.812430596083644 0.08101011550894421 AAEVVASAMRPGPES(ph)PSTRR ddPTM_A549_MK2206_60min_R1 1 AAEVVASAMRPGPESPSTRR 20 2 A0A1B0GV70;Q96N21-2 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 AAEVVAS(0.004)AMRPGPES(0.332)PS(0.332)T(0.332)RR 61.345 0.00047524 4837900.0 1432.2 1339.0 1290.5 1005.6 1860.0 1249.5 1176.3 1233.7 1711.5 1647.6 2023.1 True False 1673.9203460718265 1407.149380668585 1473.5123051030682 1251.9720451431 1586.3964639271019 1381.7212606490275 1390.0184837261738 1408.580753047794 1323.8479827038884 1275.406015692104 1520.7084352805043 1.1007503524257505 0.9253248999102366 0.9689643793100086 0.8232821072713823 1.0431956758591143 0.9086036669443214 0.9140598233544855 0.926266153569387 0.870546879329762 0.8386920109750342 1.0 10.570527856990246 -5.259533724993096 24.062872740539905 0.9341141504465112 1.1007504505829409 0.3849646083853223 0.06330014461766038 79.45377615503457 1003126.6298006553 0.008231169529488913 0.07358212373185925 5.501311985972749e-06 5.259533724993096 0.1666363001364296 AAEVVASAMRPGPES(ph)PSTRR ddPTM_A549_PD325901_60min_R1 2 AAEVVASAMRPGPESPSTRR 20 2 A0A1B0GV70;Q96N21-2 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 AAEVVAS(0.005)AMRPGPES(0.927)PS(0.034)T(0.034)RR;AAEVVASAMRPGPES(0.948)PS(0.023)T(0.029)RR 98.12100000000001 1.7221e-07 19156300.0 2327.1000000000004 2083.4 1959.06 2156.8 2226.44 2057.58 2226.85 2177.48 2466.9 2313.33 2768.8 True False 2563.3454788795243 2258.9754296929354 2092.013592384788 2290.0206375518046 2070.062535201027 2040.8237506684736 2311.5939953290754 2134.0484531999855 2363.2247718758344 2167.2659490046326 2428.2551528693166 1.0556326734653811 0.9302875058346509 0.8615295595739957 0.9430724917214037 0.8524897116989391 0.840448644063191 0.9519567960548173 0.8788402860705616 0.9732192966144271 0.892519859967644 1.0 11.24570430775436 -8.896434861723488 5.306081801727319 0.9884373591127574 0.9108708001340678 0.009616048405558297 0.0641555077573479 0.201740851940736 8.654656262057 0.009921373403944594 0.010479880801131219 1.26930250831364e-09 8.896434861723488 -0.07756655897868958 AAFNSGK ddPTM_A549_MK2206_60min_R1 3 AAFNSGK 7 0 P04406 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;; 111.82 0.022169 117390000.0 30871.04 32255.29 30829.3 23262.46 33848.130000000005 28661.05 28405.489999999998 27074.440000000002 34881.72 40209.770000000004 39596.509999999995 False True 36081.31682753607 33896.94648751726 35201.35831670984 28961.763744291507 28869.114915346698 31693.94328733476 33566.39984638185 30912.324781995074 26981.06611466072 31126.3550301019 29763.603758918907 1.2122630417939229 1.1388723879701486 1.1826981235819425 0.9730597134297918 0.9699468904767902 1.0648557057825168 1.1277666548132097 1.0385948231397195 0.9065120720327968 1.0457858289681952 1.0 14.86126159720355 -3.6562488559595514 0.3129188116137072 0.9610837258450127 1.8843851737041362 0.4141699305388049 0.07021131959868106 10.375513207445524 0.32517781344262564 0.024454058931817426 4.501918570296382 0.0002206739882182533 3.6562488559595514 0.9233014478591235 AAFNSGK ddPTM_A549_PD325901_60min_R1 2 AAFNSGK 7 0 P04406 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 116.88 0.019597999999999997 214781000.0 28776.0 24957.0 27888.0 28320.0 32744.0 26688.0 27936.0 28200.0 28298.0 31657.0 31781.0 False True 31697.31833622843 27060.21397659911 29780.647384167398 30069.26208061345 30444.174400667627 26470.661776378183 28999.119767165783 27637.52887752798 27108.733468945804 29658.171617382566 27872.13847635788 1.1372402717902397 0.9708696732958803 1.0684737164831606 1.0788286699321348 1.0922798200967407 0.9497176472064217 1.040433972863756 0.9915826480616512 0.9726104615883844 1.0640795159129848 1.0 14.766536076317669 -7.255959298755963 24.994483578278928 0.9892543276992779 1.0645138068979805 0.2993175982557431 0.04789110362838989 314.51478242193116 1434491.111260814 0.005821159166701227 0.00989434220482498 5.546776938493565e-08 7.255959298755963 0.07525947919870257 AAFSS(ph)GR ddPTM_A549_MK2206_60min_R1 2 AAFSSGR 7 0 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 1 AAFS(0.37)S(0.63)GR;AAFS(0.371)S(0.629)GR 67.464 0.023500999999999998 1416220000.0 2620.2 3076.0 2533.1000000000004 2812.0 3600.7 2769.8 2316.0 2657.2 4165.9 4148.8 4228.4 True False 3062.4257022604347 3232.5552613417226 2892.3316699392362 3500.940126235475 3071.0417998184485 3062.8983975555616 2736.78722121042 3033.8662373337083 3222.3303015752986 3211.5831985332607 3178.371582096823 0.9635203509591231 1.017047622609674 0.9100042569695763 1.1014886195042835 0.9662312037765051 0.9636690734363155 0.8610658478782763 0.9545347858075857 1.0138305790695106 1.0104492554059796 1.0 11.63407208408443 -8.766796761514348 24.869970806923973 1.006531108529181 0.9677397299007755 0.09333881513061026 0.05669299026537663 232.4318925885062 1078988.6188564007 0.009699954846137275 0.010477117781909637 1.7108157449145076e-09 8.766796761514348 -0.03879137862840554 AAFSSGR ddPTM_A549_MK2206_60min_R1 2 AAFSSGR 7 0 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 170.72 4.417799999999999e-22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AAFSSGR ddPTM_A549_PD325901_60min_R1 2 AAFSSGR 7 0 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 170.55 4.5873e-22 13530000.0 6643.3 5878.3 5588.9 6044.5 6946.8 6806.6 6574.2 6464.1 6825.2 6523.3 7340.3 False True 7317.7229254610265 6373.684970895646 5968.1963627859 6417.855036944488 6458.88073315898 6751.169306321038 6824.384778540275 6335.168454511651 6538.3605792723465 6111.417724726661 6437.48963399546 1.1367354887559245 0.9900885800634348 0.9270999569876914 0.9969499605953096 1.003322894541151 1.0487270178532142 1.0601003134050386 0.9841054222528817 1.0156692982842568 0.9493479713665307 1.0 12.652282488739226 -5.257389940446313 24.772678394840717 1.005211489529192 1.1367355474166447 0.5314378395587946 0.03694103769792822 204.3957878202272 1250346.9873043434 0.004581513463365663 0.049148579635252626 5.52853495148331e-06 5.257389940446313 0.1315240578874528 AAFTTPDHAPLS(ph)PQSSVASSGSEQTEEQGSSR ddPTM_A549_MK2206_60min_R1 2 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR 32 0 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 SAMD4B Protein Smaug homolog 2 1 AAFTTPDHAPLS(0.996)PQS(0.003)SVASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.996)PQS(0.002)S(0.002)VASSGSEQTEEQGSSR 157.47 4.317899999999999e-51 68720000.0 1663.27 1954.04 1338.68 1367.69 2222.0 1601.25 1463.62 1406.8600000000001 2618.3 2498.2 2851.1000000000004 True False 1943.9893129527209 2053.4922896203448 1528.5249535802989 1702.774111397937 1895.1467434656013 1770.6932121762732 1729.5408085958534 1606.2867133280536 2025.259230565931 1933.854884924748 2143.093183643047 0.9070950940397893 0.9581908548323647 0.7132330806922531 0.7945403981470321 0.8843044053940944 0.8262324875516003 0.8070301477305829 0.7495179050485918 0.9450168784183197 0.9023662151905992 1.0 11.065478865734402 -8.91758979129943 6.033232576710069 0.9761657867736341 0.830261254733005 0.35689495836170426 0.0696523951867894 0.12930091013859826 7.332358564988167 0.012011743898067683 0.01268809440878066 1.2089552030659981e-09 8.91758979129943 -0.14590453204062903 AAFTTPDHAPLS(ph)PQSSVASSGSEQTEEQGSSR ddPTM_A549_PD325901_60min_R1 2 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR 32 0 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 SAMD4B Protein Smaug homolog 2 1 AAFTTPDHAPLS(1)PQSSVASSGSEQTEEQGSSR;AAFTTPDHAPLS(1)PQSSVASSGSEQTEEQGSSR 173.94 4.9955e-63 79917000.0 2241.0 2512.1000000000004 2610.8 2933.5 3473.2 2973.8 3006.2 3462.0 2620.5 3389.0 3788.9 True False 2468.504670262995 2723.8034832157186 2787.984588015787 3114.6956325381184 3229.254413889527 2949.5823587602486 3120.6025860557597 3392.9476941135385 2510.369498034224 3175.0179616296414 3322.889319816005 0.7428789925508807 0.8197093616607553 0.8390242104633696 0.9373455847486926 0.9718212384119785 0.8876559147397581 0.9391232405623892 1.0210835714207336 0.7554779158799151 0.955499162339072 1.0 11.698222524603903 -5.686318564629916 1.7015361525573598 0.9046398473675931 0.7464505012195044 0.3833752427087527 0.07166995196068343 0.5740531853061173 2.7134389721768577 0.013656646122209896 0.1132239319445371 2.059118949778929e-06 5.686318564629916 -0.15818934614808866 AAGARPLT(ph)SPESLSR ddPTM_A549_PD325901_60min_R1 1 AAGARPLTSPESLSR 15 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 AAGARPLT(0.5)S(0.5)PESLSR 127.61 1.3589000000000001e-09 44818000.0 1619.1 1781.0 1749.4 1728.8 1960.9 2362.0 1981.4 2116.9 2391.3 2229.8 2527.5 True False 1783.469840081576 1931.0911204200424 1868.1248039967893 1835.5840496103287 1823.1731487377574 2342.764655118604 2056.8032612636835 2074.676768824076 2290.8019769697535 2089.0100474599512 2216.6335231425865 0.8045848903129005 0.8711819523879969 0.8427756706251983 0.8280954115536281 0.8224964251884954 1.0569021133440217 0.927895044349818 0.9359584014062667 1.0334599531464346 0.9424246388272159 1.0 11.114154553266651 -7.2533528327023395 24.995762534739704 1.0047583185793265 0.8360808860311779 0.7364135824718177 0.04328498941305488 198.7574188986736 614364.9625361415 0.006090628695288969 0.010427746588487849 5.580166625487303e-08 7.2533528327023395 -0.1686774325481486 AAGARPLTS(ph)PESLSR ddPTM_A549_MK2206_60min_R1 2 AAGARPLTSPESLSR 15 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 AAGARPLT(0.08)S(0.879)PES(0.037)LS(0.004)R;AAGARPLT(0.037)S(0.926)PES(0.037)LSR 96.447 4.7631e-06 39874000.0 9855.400000000001 10043.6 9830.2 8928.0 12254.4 10202.6 10123.599999999999 10625.0 15110.4 13711.1 14671.5 True False 11518.75057860374 10554.776340315906 11224.270175609596 11115.360400793146 10451.793993305513 11282.232360062239 11962.927077999057 12131.126287697834 11687.918526350459 10613.752987227484 11028.161637199306 1.0444851061803102 0.9570748677380086 1.0177825230407207 1.007906917441227 0.9477367431803289 1.0230383568196826 1.0847616739354522 1.1000134643273722 1.0598247387783757 0.9624226898729911 1.0 13.42890469741071 -7.513407262106182 24.831178678050613 1.0399779176659694 0.9939248922256212 0.20874308972694589 0.043095120463181064 501.4014735365063 1314511.5633342126 0.006311334916410963 0.009655552912935772 3.0661453446726044e-08 7.513407262106182 -0.04605302544034817 AAGARPLTS(ph)PESLSR ddPTM_A549_PD325901_60min_R1 2 AAGARPLTSPESLSR 15 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 AAGARPLT(0.126)S(0.869)PES(0.005)LSR;AAGARPLT(0.123)S(0.871)PES(0.006)LSR 105.89 1.3759e-06 47760100.0 7140.9 6964.8 7360.700000000001 8499.7 8331.8 7930.2 7113.0 7496.6 7588.200000000001 8440.4 9469.9 True False 7865.838911147267 7551.748138967728 7860.241365484832 9024.707164780722 7746.603111149594 7865.619080449432 7383.689107382953 7347.0744320310705 7269.29434267632 7907.471703552327 8305.162334642127 0.9471023676849308 0.9092836280235256 0.9464283837895064 1.0866382619804145 0.9327455381380451 0.947075898521659 0.8890481377569749 0.8846394731365186 0.8752742029321883 0.9521152489180169 1.0 13.019792652379454 -6.941939035590259 24.999815273947515 0.9314133749155332 0.9714657126574078 0.1463206154548934 0.052969969763471736 170.8275189175313 73553.46847922538 0.009301395641298985 0.017577984867626052 1.143038778443908e-07 6.941939035590259 0.040052337741874555 AAGDT(ph)PER ddPTM_A549_PD325901_60min_R1 2 AAGDTPER 8 0 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 1 AAGDT(1)PER;AAGDT(1)PER 72.23 0.0060969 3313500.0 719.04 749.71 682.7 638.59 672.44 642.3 712.2 722.48 645.62 894.4100000000001 906.6500000000001 True False 792.036411470729 812.8906928074736 729.0321274086016 678.0342539568832 625.2101341920635 637.0693217538866 739.3031607307938 708.0695696254048 618.4868366040281 837.9367999590343 795.137797727884 0.9960995612760237 1.022326815717123 0.9168626236758204 0.8527254721060605 0.7862915534623169 0.8012061853609777 0.9297799234841578 0.8904991960496939 0.77783604096216 1.0538258932646 1.0 9.635061091519638 -5.885231679337787 3.946875098007578 0.8785296593672162 1.0091808877908293 0.24023412702575275 0.08206053155993355 0.2323769395160988 6.631914745081675 0.012234689479019036 0.042462051091706005 1.3024717746871791e-06 5.885231679337787 0.1306512284236131 AAGDT(ph)PERK ddPTM_A549_MK2206_60min_R1 2 AAGDTPERK 9 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 1 AAGDT(1)PERK;AAGDT(1)PERK 73.499 0.0013755999999999998 34477000.0 9066.4 7501.5 5684.700000000001 4271.799999999999 3516.2 2643.1 2330.7 2742.5 3286.1000000000004 9692.5 9780.900000000001 True False 10596.5866678017 7883.294308502906 6490.875940193269 5318.391191768391 2998.9716378819726 2922.7910876522164 2754.1580209305407 3131.2577735540035 2541.803596823397 7502.957518266398 7352.032590892738 1.4413138865744586 1.0722605226571307 0.8828682218076375 0.7233905897474527 0.4079105472950325 0.39754871207627623 0.37461178073968665 0.42590368511598004 0.3457280099617666 1.0205283267596796 1.0 12.843927446639295 -5.613700908567399 1.2692893062349249 0.6027411801589112 1.5335964340312596 0.5799396221190527 0.2299092757568281 0.5534921304204241 1.141496841679803 0.041520673153958285 0.5649313539471595 2.433879604691905e-06 5.613700908567399 0.9308552538723484 AAGDT(ph)PERK ddPTM_A549_PD325901_60min_R1 2 AAGDTPERK 9 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 1 AAGDT(1)PERK;AAGDT(1)PERK 69.721 0.0023965999999999996 38129000.0 10135.5 9876.0 8462.9 9221.1 9931.1 9369.0 6819.7 9070.0 9959.2 11493.3 14661.1 True False 11164.44849863926 10708.285179825016 9037.243285551853 9790.666404362453 9233.57379643507 9292.701970282045 7079.227415383035 8889.091734722644 9540.649458050922 10767.611076541149 12857.877644370243 0.8682963710988149 0.8328190293919607 0.7028565316538663 0.7614527587800812 0.7181258098592923 0.7227244050149139 0.5505751113196071 0.6913342917534052 0.7420081075532904 0.8374330021141314 1.0 13.6503649067696 -10.421442741382178 0.8317119532631665 0.9955954336215306 0.7291596119899107 0.3479123328194753 0.0896305969857122 0.3275963740399195 0.4192997056092199 0.05096115680027935 0.016135811086646124 3.7892848946336135e-11 10.421442741382178 -0.26643582163161983 AAGGAPS(ph)PPPPVR ddPTM_A549_MK2206_60min_R1 2 AAGGAPSPPPPVR 13 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR 193.34 3.5947e-26 135289000.0 17298.7 18890.0 15762.3 15741.6 20896.6 16566.5 14433.400000000001 16679.8 22229.0 24220.0 22235.0 True False 20218.297647390507 19851.42031428646 17997.63115592879 19598.292706667275 17822.737821558643 18319.556034047313 17055.761951044253 19044.21272974516 17194.16699241877 18748.68517847946 16713.435845218733 1.209703249207997 1.1877522071540676 1.0768361049518989 1.172607050289652 1.066371869112553 1.0960975471293084 1.0204820905166216 1.1394552805366587 1.0287631550838519 1.1217732459147804 1.0 14.028720723799616 -2.000000000000027 0.1573921420077011 0.9780352379921443 1.8496827034820773 0.3284064421148356 0.05529677392474033 21.928973129295688 0.21196331096938595 0.05922701122372483 4.454802275565801 0.009999999999999376 2.000000000000027 0.871647465489933 AAGGAPS(ph)PPPPVR ddPTM_A549_PD325901_60min_R1 2 AAGGAPSPPPPVR 13 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR 159.93 1.5366e-18 201080000.0 30185.0 31619.0 29593.0 30120.0 36012.0 32851.0 31256.0 31816.0 32649.0 33975.0 36487.0 True False 33249.35897897748 34283.64409689014 31601.358937165285 31980.443992516823 33482.64135465557 32583.472347714327 32445.46418393947 31181.404920830828 31276.876069955873 31829.812701790226 31999.330310149784 1.0390642134292167 1.071386299794399 0.9875631343178995 0.9994097902221731 1.0463544402376226 1.0182548207072715 1.013941975330908 0.9744392966542953 0.9774228325033179 0.9947024638729458 1.0 14.965754091901594 -8.031044510157718 3.2926983154789538 0.9879636068712493 1.0266522709128243 0.41796085192442334 0.022158531596571888 0.20083887240326395 4.4668142480498965 0.003753645154912765 0.0050792861084203635 9.310124525775186e-09 8.031044510157718 0.038688664041575005 AAGGAPS(ph)PPPPVRR ddPTM_A549_MK2206_60min_R1 3 AAGGAPSPPPPVRR 14 1 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 AAGGAPS(1)PPPPVRR;AAGGAPS(1)PPPPVRR;AAGGAPS(1)PPPPVRR 96.24700000000001 1.9647e-05 239590000.0 3976.3 5176.6 3780.7999999999997 4282.3 5784.1 4408.9 4831.5 4297.3 6391.4 6645.0 6563.1 True False 4647.4022287986345 5440.066828953694 4316.974291463526 5331.463692239756 4933.266552150938 4875.4468716090405 5709.321010051012 4906.4554349293085 4943.758104968523 5143.889884847072 4933.3011376548275 0.9420471402659797 1.1027234456520063 0.8750680672041261 1.0807091526494985 0.9999929893791349 0.9882727073755547 1.157302352064623 0.9945582679880189 1.0021196693698424 1.042687186797673 1.0 12.268337639406042 AAGGAPS(ph)PPPPVRR ddPTM_A549_PD325901_60min_R1 2 AAGGAPSPPPPVRR 14 1 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 AAGGAPS(1)PPPPVRR;AAGGAPS(1)PPPPVRR 104.41 9.7992e-06 290210000.0 10499.900000000001 10645.9 10912.3 10840.3 12515.2 11759.0 10323.5 11135.0 11792.1 12123.0 14808.7 True False 11565.842118382156 11543.067354789293 11652.874298990597 11509.880710892443 11636.175527096113 11663.238602684025 10716.366441735965 10912.903689761491 11296.51904513237 11357.551711075883 12987.323780083734 0.8905485313393477 0.8887949165085703 0.8972498488765225 0.8862396060798166 0.8959640742106062 0.8980478811631527 0.8251404695222646 0.8402734754712592 0.869811150966742 0.8745105537826713 1.0 13.664816553447054 -10.600586343679446 0.8875391470312805 0.9999597946597832 0.8770825418859638 0.0 0.04278176739431192 0.2253611574389821 0.3172841188260145 0.017629963244219258 0.004842234917338069 2.5084974063121414e-11 10.600586343679446 -0.12287725277381945 AAGGAT(ph)PK ddPTM_A549_MK2206_60min_R1 2 AAGGATPK 8 0 P16403 P16403 HIST1H1C Histone H1.2 1 AAGGAT(1)PK;AAGGAT(1)PK 78.098 0.0046036 107183000.0 16716.2 14138.1 12777.9 8397.7 8583.6 8592.4 8566.9 9405.6 7391.5 18874.2 18281.4 True False 19537.485888148207 14857.668901292383 14589.998359842306 10455.136876987082 7320.963810626166 9501.642064826488 10123.394838250244 10738.872603441947 5717.337051800047 14610.505111298804 13741.623839027736 1.4217741743635552 1.08121638864069 1.0617375741580912 0.7608370742396058 0.5327582748869764 0.6914497279310449 0.7366956741676104 0.7814849779938203 0.41605978440205704 1.063229883341978 1.0 13.746264876142806 -5.768697890229961 1.2623511735603596 0.7082857178392769 1.421225786041833 0.5537498850026363 0.18341159905217308 0.4223028744135374 0.9781361122032499 0.03173058216392844 0.30671191149359606 1.7033429987333819e-06 5.768697890229961 0.7129400682025561 AAGGAT(ph)PK ddPTM_A549_PD325901_60min_R1 2 AAGGATPK 8 0 P16403 P16403 HIST1H1C Histone H1.2 1 AAGGAT(1)PK;AAGGAT(1)PK 71.34899999999999 0.0065363 273190000.0 20302.3 21639.0 19690.4 19132.3 21083.9 15566.7 14298.2 17422.4 18164.7 22652.7 24131.0 True False 22363.37455023668 23462.594472077097 21026.708951994035 20314.05871839409 19603.039599506345 15439.929956322932 14842.325825275257 17074.8965643916 17401.300828445805 21222.40465606604 21163.039979012367 1.056718438013381 1.1086589873357149 0.9935580603186719 0.9598837756078418 0.9262865646403781 0.7295705140487799 0.7013324097102573 0.8068262679333865 0.822249584450196 1.0028051110385154 1.0 14.369259258779865 -6.30157513471573 1.5849414898768466 0.8759798380542424 1.0796899893484073 0.46448703096652544 0.09387306012284954 0.35613750311940756 1.6807349884704994 0.016564988417241272 0.06009991550837097 4.993727792081521e-07 6.30157513471573 0.20371015129416492 AAGGAT(ph)PKK ddPTM_A549_MK2206_60min_R1 4 AAGGATPKK 9 1 P16403 P16403 HIST1H1C Histone H1.2 1 AAGGAT(1)PKK;AAGGAT(1)PKK;AAGGAT(1)PKK;AAGGAT(1)PKK 89.24700000000001 0.001369 290511600.0 27665.0 20889.08 14778.46 10129.61 16844.09 18436.6 17262.53 17087.4 16380.350000000002 34416.5 33532.2 True False 32334.175655688487 21952.24494752541 16874.26785003758 12611.364904735481 14366.346674231107 20387.54877477539 20398.908251192363 19509.591277967796 12670.226879043901 26641.788746702674 25205.229298360406 1.2828360048996585 0.8709401008684099 0.6694748796090202 0.5003471603234273 0.5699748454645336 0.8088618648710962 0.8093125442234841 0.7740295097905295 0.5026824683506488 1.0569945002815633 1.0 14.621435458518933 -5.307821115569348 2.8830195388393385 0.7322225781994617 1.3498292097793878 0.44560977848672145 0.1728774920938738 0.274967382208627 3.3768171367965367 0.027046055786413937 0.372542535971543 4.92242246849928e-06 5.307821115569348 0.6176066315799261 AAGGAT(ph)PKK ddPTM_A549_PD325901_60min_R1 3 AAGGATPKK 9 1 P16403 P16403 HIST1H1C Histone H1.2 1 AAGGAT(1)PKK;AAGGAT(1)PKK;AAGGAT(1)PKK 77.66199999999999 0.0041018 201723300.0 18669.8 18225.899999999998 16085.599999999999 16610.9 16139.4 13047.1 10875.659999999998 12845.1 15411.5 20040.8 25687.3 True False 20565.14435201965 19761.86055680162 17177.265546570685 17636.917566908967 15005.824221907364 12940.848743352226 11289.539192689499 12588.894403713985 14763.808249934904 18775.42046781567 22527.9249452109 0.9128734404981891 0.8772161930077229 0.7624876941993859 0.7828913497271888 0.6660988199491218 0.5744358956639394 0.501135334041917 0.5588128704410565 0.6553558876745756 0.8334287562426848 1.0 14.459426812114197 -4.397254578073648 23.35289964848014 0.7709902784477637 0.730384999957127 0.0 0.1563274015951841 0.0 0.0 0.0257720525421704 0.0 4.006318033558084e-05 4.397254578073648 -0.040605278490636665 AAGGGAGSS(ph)EDDAQSR ddPTM_A549_PD325901_60min_R1 1 AAGGGAGSSEDDAQSR 16 0 D6REM1;Q9H4A6 D6REM1 GOLPH3 Golgi phosphoprotein 3 1 AAGGGAGS(0.115)S(0.885)EDDAQSR 110.38 4.7536e-07 37652000.0 353.58 565.59 551.16 386.35 573.66 377.24 393.37 534.29 473.14 730.04 552.89 True False 389.47518130816115 613.2542542382778 588.5650319943236 410.2139620354876 533.3681006195635 374.1678825135236 408.33991061032367 523.6331668076036 453.25557118867073 683.945149810594 484.88803505847886 0.8032270403644614 1.2647337321167713 1.2138163646858 0.8459972867468563 1.099981979458903 0.7716583117345799 0.8421323709525576 1.0799053161714993 0.9347633647714298 1.4105218119645049 1.0 8.921507844468406 -6.259814945762483 24.987146185654662 0.9560436495961611 1.1110065090771708 0.011387371017128944 0.1984048769171762 173.93341384952555 2675427.5380644253 0.018507042107939135 0.04630484703002483 5.497750848387972e-07 6.259814945762483 0.15496285948100974 AAGGGAGSSEDDAQS(ph)RRDEQDDDDKGDSK ddPTM_A549_MK2206_60min_R1 2 AAGGGAGSSEDDAQSRRDEQDDDDKGDSK 29 3 D6REM1;Q9H4A6 D6REM1 GOLPH3 Golgi phosphoprotein 3 1 AAGGGAGSSEDDAQS(0.999)RRDEQDDDDKGDSK;AAGGGAGS(0.004)S(0.004)EDDAQS(0.989)RRDEQDDDDKGDS(0.003)K 76.063 1.7353e-06 14058000.0 1022.1099999999999 853.72 1039.35 578.0 1155.12 730.61 838.9000000000001 939.24 1116.94 1462.32 1143.46 True False 1194.6171798097148 897.1707014670533 1186.7454585888215 719.6100259474057 985.2033781782112 807.9226652603323 991.3172711025144 1072.3801463018647 863.9548733866668 1131.9808963746532 859.5073241094588 1.3898859803754036 1.0438197282339832 1.3807275695043277 0.8372354787005433 1.1462419813571536 0.9399834563334598 1.1533552342088822 1.2476684214564022 1.0051745333081556 1.3170113443157754 1.0 9.7473661231504 -2.0000000000000004 0.4671717353981379 1.0237742914066255 9.104271464589827 0.06898212078680255 0.1700540122618939 71.23782430399805 0.7319170410294527 0.026096553419149578 559.6378455374877 0.00999999999999999 2.0000000000000004 8.0804971731832 AAGGGAGSSEDDAQS(ph)RRDEQDDDDKGDSK ddPTM_A549_PD325901_60min_R1 3 AAGGGAGSSEDDAQSRRDEQDDDDKGDSK 29 3 D6REM1;Q9H4A6 D6REM1 GOLPH3 Golgi phosphoprotein 3 1 AAGGGAGSSEDDAQS(1)RRDEQDDDDKGDSK;AAGGGAGSSEDDAQS(0.999)RRDEQDDDDKGDSK;AAGGGAGS(0.021)S(0.021)EDDAQS(0.957)RRDEQDDDDKGDSK 136.91 2.1256999999999997e-28 32216800.0 2434.6400000000003 2765.8999999999996 2455.13 2546.33 2899.2 3053.76 3453.14 2689.2200000000003 3072.0099999999998 2734.4900000000002 3221.94 True False 2681.8028605127597 2998.9920999268943 2621.7498856960297 2703.6110209649864 2695.5701936970295 3028.8911910309002 3584.5511323307114 2635.5813974477223 2942.9041029025416 2561.8338347290187 2825.661805560444 0.9490884065585651 1.0613414860990669 0.9278356951765605 0.9568063013219482 0.9539606574263716 1.0719227563151874 1.2685704726860434 0.9327306588004713 1.0414919779541145 0.9066314410619648 1.0 11.464373089103253 -7.2516539538442455 24.08618688139033 1.0368297585505115 0.9718378380644817 0.11412526665935663 0.09298672495381864 737.987805710669 1816507.3198745816 0.012523735509304247 0.02151035204901014 5.602037944946994e-08 7.2516539538442455 -0.06499192048602986 AAGISLIVPGKS(ph)PTR ddPTM_A549_MK2206_60min_R1 4 AAGISLIVPGKSPTR 15 1 J3KPC5;P47736-3;F2Z357;P47736;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 AAGISLIVPGKS(0.89)PT(0.11)R;AAGISLIVPGKS(0.989)PT(0.011)R;AAGISLIVPGKS(0.914)PT(0.086)R;AAGISLIVPGKS(0.971)PT(0.029)R 159.22 1.144e-19 210484400.0 9112.7 8328.4 8121.7 8089.2 12337.6 9281.400000000001 8727.9 8260.670000000002 13040.2 12059.5 12420.7 True False 10650.700975875387 8752.279986527441 9273.479185087635 10071.054363137984 10522.755383519892 10263.551587505304 10313.646454232485 9431.64526974088 10086.615520920384 9335.250574313503 9336.297396119102 1.140784244973029 0.9374465717175607 0.9932716141778454 1.0786989676790186 1.1270801407733622 1.0993171224142497 1.104682725565238 1.010212600303565 1.0803657052648272 0.9998878761289208 1.0 13.188634801691997 -4.931537266820991 19.41566129655498 1.0453061265149657 3.178579397985547 0.19700345684475662 0.056538245859008046 282.60932534340304 90174.42654893204 0.007932894606730549 3221.315275616334 1.170746136252856e-05 4.931537266820991 2.133273271470581 AAGISLIVPGKS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 AAGISLIVPGKSPTR 15 1 J3KPC5;P47736-3;F2Z357;P47736;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 AAGISLIVPGKS(0.923)PT(0.077)R;AAGISLIVPGKS(0.983)PT(0.017)R;AAGISLIVPGKS(0.963)PT(0.037)R;AAGISLIVPGKS(0.988)PT(0.012)R 183.41 2.4803e-33 391682200.0 15514.100000000002 13698.400000000001 14998.3 15093.4 18576.8 16763.3 15691.0 17155.5 18798.600000000002 18154.7 18368.399999999998 True False 17089.08001112321 14852.812242538976 16016.174830104635 16025.685038401514 17272.029654480884 16626.78524265439 16288.129591444655 16813.32009427061 18008.560215892456 17008.40914369952 16109.203246881225 1.0608271401896734 0.9220078743133687 0.9942251385527339 0.9948154972533555 1.072183980162072 1.032129583806286 1.0111070884029023 1.0437089803014128 1.1179050844354421 1.0558193898877266 1.0 13.97559752038481 -6.685902579220741 6.378312611383431 1.051629030965241 0.9871257657140758 0.27562127305805284 0.04192789398690724 0.23078945335284506 15.374562377120009 0.007297649353667814 0.01525198745729629 2.0610922048666997e-07 6.685902579220741 -0.06450326525116512 AAGISLIVPGKS(ph)PTRK ddPTM_A549_MK2206_60min_R1 2 AAGISLIVPGKSPTRK 16 2 J3KPC5;P47736-3;F2Z357;P47736;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 AAGISLIVPGKS(0.969)PT(0.031)RK;AAGISLIVPGKS(0.981)PT(0.019)RK 94.01 1.4713999999999998e-06 15091700.0 1276.65 1507.9299999999998 1378.0 1261.38 1983.38 1627.9099999999999 1859.0700000000002 1408.09 2232.0 1619.1 1977.11 True False 1492.1173089042013 1584.6771961102158 1573.4211208307079 1570.4181566254995 1691.6274293675979 1800.1743556807971 2196.8389548081436 1607.6910695947702 1726.4555637715898 1253.3441854862128 1486.1390215399333 1.0040226972561916 1.0663048161323276 1.058730776882726 1.0567101286380574 1.138269976663918 1.2113095272980998 1.4782190111203628 1.0817904962409808 1.1617052905202914 0.8433559494235613 1.0 10.537353364404641 -6.705876331481514 6.2339009350434775 1.123265131409331 1.0478862791263726 0.0705417512218266 0.14558322871145615 0.5105347766108501 41.25359655164083 0.01978085829661377 0.04123056142581599 1.9684467394603865e-07 6.705876331481514 -0.07537885228295838 AAGISLIVPGKS(ph)PTRK ddPTM_A549_PD325901_60min_R1 2 AAGISLIVPGKSPTRK 16 2 J3KPC5;P47736-3;F2Z357;P47736;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 AAGISLIVPGKS(0.968)PT(0.032)RK;AAGISLIVPGKS(0.797)PT(0.203)RK 117.26 3.0374e-08 22166300.0 2573.0 2882.7 2992.1 2869.3 3829.6000000000004 3695.7 3055.0 3603.0 4110.8 3877.8999999999996 3374.2 True False 2834.209065857513 3125.63524583653 3195.1618989589524 3046.5301443468993 3560.6221074027835 3665.6034445054283 3171.2596967601453 3531.135338501181 3938.0373716920753 3633.0487321934456 2959.1947908161096 0.9577636033469338 1.0562451838374987 1.0797403093825284 1.029513215487482 1.2032401917079638 1.2387165102755875 1.0716630438125199 1.1932757348249243 1.330780043244809 1.2277153039971036 1.0 11.53098895060755 -6.752508948416574 24.397359455906336 1.1649688948266517 1.0361265594998654 0.39861471374795765 0.08715047997990172 187.20825233518084 511434.9458664713 0.017675188812986617 0.03635440540470928 1.768035787882222e-07 6.752508948416574 -0.12884233532678624 AAGKGDVPTK ddPTM_A549_PD325901_60min_R1 1 AAGKGDVPTK 10 1 P62424;Q5T8U3 P62424 RPL7A 60S ribosomal protein L7a 0 49.5 0.029356 3054700.0 2404.2 2894.6 3203.7 3662.3 3443.5 3608.9 2964.6 3068.8 3644.3 3420.9 3983.7 False True 2648.272614121503 3138.538100599582 3421.12234741312 3888.511953313229 3201.640439430092 3579.5103149269803 3077.419475291368 3007.590376572974 3491.142744394626 3204.903790185554 3493.730154754947 0.7580072005610448 0.8983344338508941 0.9792176830706264 1.1129972210420962 0.9163960287753413 1.0245526003361443 0.8808406313530018 0.8608536559355223 0.999259413221482 0.9173300879644921 1.0 11.770552467779149 -5.392561259405661 2.3515891709406986 0.9849900541800355 0.7362045473814982 0.4081174261056145 0.07013379711045176 0.2697601480639945 2.1422797507004536 0.009341647135544612 0.12064944317072215 4.049848159765097e-06 5.392561259405661 -0.24878550679853728 AAGMS(ph)SPGAQSHPEELPR ddPTM_A549_MK2206_60min_R1 1 AAGMSSPGAQSHPEELPR 18 0 Q13459-2;Q13459;M0R300;M0R0P8;M0QZY4;M0R2J3 Q13459-2 MYO9B Unconventional myosin-IXb 1 AAGMS(0.5)S(0.5)PGAQSHPEELPR 103.2 2.0080999999999997e-09 5397300.0 1401.7 1412.4 1212.1 1195.0 1484.3 1446.8 1229.4 1290.1 1533.1 2103.5 2124.2 True False 1638.2726917252326 1484.2851271518373 1383.9940062111032 1487.775053645589 1265.9614362403197 1599.8994156918875 1452.7660663886406 1472.975625765549 1185.8552978576279 1628.317889055803 1596.7025150624536 1.026035016711396 0.9295940309167615 0.8667826305496672 0.9317797395636945 0.7928599249377413 1.0020021892614785 0.9098539350217137 0.9225109949225169 0.7426901922373713 1.0198004159792489 1.0 10.64087983096016 AAGPAS(ph)PPEEDPER ddPTM_A549_MK2206_60min_R1 2 AAGPASPPEEDPER 14 0 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B 1 AAGPAS(1)PPEEDPER;AAGPAS(1)PPEEDPER 198.48 2.5936e-31 36876000.0 6864.799999999999 7105.6 6305.8 6548.700000000001 7843.8 6470.9 6346.9 6541.200000000001 8261.7 8925.6 9671.0 True False 8023.41041175385 7467.244689528528 7200.05725960398 8153.131793982319 6689.987410619032 7155.64634296422 7500.049574395694 7468.4351315848535 6390.438141223905 6909.300760901577 7269.423793978429 1.1037202726301334 1.0272127339327723 0.9904577671710504 1.1215650682982472 0.9202912913346215 0.9843484911268406 1.031725455407938 1.027376494100024 0.8790845495233578 0.9504605807443559 1.0 12.827625299080026 -6.849538202979295 0.572307977805283 0.949565171039557 1.0711135323461518 0.26030505467938236 0.0589494456996151 1.1190411840028447 0.6019190475954868 0.01403227498340812 0.06538183410415152 1.414040332677786e-07 6.849538202979295 0.12154836130659485 AAGPAS(ph)PPEEDPER ddPTM_A549_PD325901_60min_R1 2 AAGPASPPEEDPER 14 0 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B 1 AAGPAS(1)PPEEDPER;AAGPAS(1)PPEEDPER 214.61 1.8856e-38 43570000.0 9312.2 9234.3 9177.8 9289.8 11296.4 10683.5 10367.0 10897.6 10594.6 10953.8 10566.7 True False 10257.567688720688 10012.506868778673 9800.660698594793 9863.609847333433 10502.97983446437 10596.497118103132 10761.521858040067 10680.23881899819 10149.345805713947 10262.175198612798 9267.062887830174 1.106884437159834 1.0804401556319903 1.0575800355758196 1.0643728187370634 1.1333666299229763 1.143457991638194 1.1612656553968645 1.1524944794562522 1.0952063160208416 1.107381629198766 1.0 13.177896446750529 -10.219048312298225 0.8763550126720149 1.0059891889735466 1.1102280349890257 0.0432016933339191 0.044812080786674084 0.324297242730737 0.4875171631082994 0.01856444690367488 0.007508895391210611 6.038814479484862e-11 10.219048312298225 0.10423884601547906 AAGPAS(ph)PPEEDPERTK ddPTM_A549_MK2206_60min_R1 2 AAGPASPPEEDPERTK 16 1 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B 1 AAGPAS(1)PPEEDPERTK;AAGPAS(1)PPEEDPERTK 111.95 9.605299999999999e-08 11875200.0 4080.2 4566.4 5042.5 4655.7 6795.4 4643.8 4441.299999999999 3993.7 7235.599999999999 8548.9 7669.599999999999 True False 4768.838008687517 4798.810255328622 5757.602323504242 5796.346709002314 5795.8056618119435 5135.203833695037 5248.2267208816265 4559.819205193301 5596.748152878905 6617.697552531093 5765.026649808396 0.8272013814274409 0.8324003594134493 0.9987121783202164 1.005432769195431 1.0053389192926925 0.8907511006676282 0.9103560208270771 0.7909450349799944 0.9708104563688212 1.147904069576337 1.0 12.493111561655795 -14.999999999882403 0.012865708617172835 2.0928301022975075 5.590630113777703e-16 0.2622940024836602 0.08567464669244948 7555.464611424617 7.565630598510234 742.5866521118529 508.8640622082838 1.0000000002707762e-15 14.999999999882403 -2.092830102297507 AAGPAS(ph)PPEEDPERTK ddPTM_A549_PD325901_60min_R1 2 AAGPASPPEEDPERTK 16 1 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B 1 AAGPAS(1)PPEEDPERTK;AAGPAS(1)PPEEDPERTK 120.11 2.9345e-08 24411000.0 6362.4 7071.7 6901.1 8071.7 7627.6 8267.1 7780.6 8969.5 8937.5 7925.3 8860.4 True False 7008.306164248668 7667.656977133309 7369.450145685513 8570.270576839252 7091.863689791477 8199.775478548265 8076.694990707689 8790.596286063377 8561.887955993461 7424.895205459841 7770.626970703296 0.9018971301377973 0.9867488178292172 0.9483726568614999 1.1029059314197889 0.9126501267567105 1.0552270118566929 1.0393878153150737 1.131259590661803 1.1018271740843262 0.9555078674414654 1.0 12.923815291407386 -7.333370814694314 14.636487352564894 1.0558630537132767 0.9775441221460325 0.24279332020848265 0.0659517636985218 2.882207699489979 585.416320023917 0.009453221237971219 0.015112231807310606 4.641188263108721e-08 7.333370814694314 -0.07831893156724423 AAGQS(ph)PRR ddPTM_A549_MK2206_60min_R1 1 AAGQSPRR 8 1 A0A494C0X0;Q99426;K7EP07;Q99426-2 A0A494C0X0 TBCB Tubulin-folding cofactor B 1 AAGQS(1)PRR 47.603 0.029907999999999997 2506200.0 644.32 441.08 332.05 334.92 183.43 219.44 261.5 194.39 422.07 988.28 731.5 True False 753.0654638884229 463.5290879949959 379.13968299842975 416.97541503513037 156.4476899882517 242.66099514751707 309.01116508917335 221.94537779440762 326.47181890729183 765.0268616097305 549.8483616270522 1.3695875380259976 0.8430125837301222 0.6895349872035997 0.7583461989433987 0.2845287917659853 0.44132348495039747 0.5619934270146422 0.4036483388577365 0.5937488254784128 1.391341531592356 1.0 9.102889993699232 -5.239622305864429 2.271954737608919 0.6922840200082335 1.5637926523685126 0.31863651751217015 0.29035667303157564 0.5539940823463644 3.1350684758523477 0.03608040027779529 0.9803669415707373 5.75940599522949e-06 5.239622305864429 0.8715086323602791 AAGQS(ph)PRR ddPTM_A549_PD325901_60min_R1 1 AAGQSPRR 8 1 A0A494C0X0;Q99426;K7EP07;Q99426-2 A0A494C0X0 TBCB Tubulin-folding cofactor B 1 AAGQS(1)PRR 62.823 0.0042583 10673000.0 1071.4 1279.8 918.56 885.2 776.48 1206.5 481.57 848.16 616.78 1163.5 1378.2 True False 1180.1677392770061 1387.6532374584901 980.8990053499998 939.876793564937 721.9427235105782 1196.6746640137997 499.8964098752157 831.242783431352 590.8588815102264 1090.036411435848 1208.6901371296192 0.9764022250397876 1.148063672260841 0.8115388512058396 0.7775994563808915 0.5972934678072561 0.990059095588921 0.4135852477975562 0.6877219875437852 0.48884231231785347 0.9018328006088075 1.0 10.239228723687992 -5.8965485715083625 4.469188342213115 0.7318666644456339 1.0601183413697584 0.32137519751034027 0.1823903088202557 0.2132948109431298 7.37587243527564 0.029786566958706216 0.09961157175805342 1.2689702148403403e-06 5.8965485715083625 0.3282516769241245 AAGS(ph)DADHLR ddPTM_A549_MK2206_60min_R1 1 AAGSDADHLR 10 0 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 AAGS(1)DADHLR 42.809 0.022769 1421200.0 271.98 280.49 292.47 285.45 350.8 349.59 175.19 216.0 307.0 353.44 334.53 True False 317.88357472742297 294.7657429303444 333.9466438384303 355.3852628143376 299.19778470194996 386.5833817609391 207.0197553039092 246.61866147225695 237.46499017826073 273.5976585252593 251.45696844169206 1.2641668938323096 1.17223135535691 1.3280468857472367 1.4133044910892754 1.1898568035561443 1.5373739059873388 0.8232810432211706 0.9807589067846533 0.9443563709920579 1.0880496182737573 1.0 7.974167724090091 -7.770384718872897 24.999997533549774 0.96343848469169 1.3099263979164704 0.7116018957410692 0.11094286244610993 70.20912806624412 196216.85324932254 0.015296458089149333 0.02130148953156729 1.6967399329494126e-08 7.770384718872897 0.34648791322478034 AAGS(ph)DADHLR ddPTM_A549_PD325901_60min_R1 1 AAGSDADHLR 10 0 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 AAGS(1)DADHLR 64.55 0.0018434 2065100.0 375.33 348.72 324.56 335.91 305.03 298.19 307.7 570.57 402.2 373.13 369.78 True False 413.43322529665767 378.10785823294634 346.58659333782884 356.65839779303883 283.6057450963731 295.76163950457936 319.40969187990083 559.189533746494 385.2969326881759 349.5705081212357 324.2994042285522 1.2748504002964118 1.1659221488007183 1.068724113639042 1.0997812303771037 0.8745182427054353 0.9120017972531931 0.9849222283948283 1.7243002190420351 1.1880901650273625 1.0779252245399549 1.0 8.341182563191316 -10.845337822823941 1.30181776247076 1.0055672533683742 1.1413736673374921 0.02980576742809582 0.2175586603020327 1.1780718430302466 3.7526184591408525 0.12786300222163818 0.03705086246990497 1.4277829029532041e-11 10.845337822823941 0.13580641396911797 AAGS(ph)PSPLPAPDPAPK ddPTM_A549_MK2206_60min_R1 1 AAGSPSPLPAPDPAPK 16 0 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3KRF7 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 AAGS(0.961)PS(0.039)PLPAPDPAPK 93.478 7.663e-06 14599000.0 3660.6 4475.6 4205.6 3935.9 5157.5 3826.1 3823.8 4239.8 5688.3 5484.7 6253.1 True False 4278.4197869225845 4703.388923166778 4802.017319133256 4900.195676689264 4398.83858209894 4230.9753624403675 4518.534963931091 4840.804633842944 4399.909132348539 4245.702460710415 4700.282693219576 0.910247333228371 1.0006608602396794 1.0216443632338197 1.0425321191336159 0.9358668125311939 0.9001533819537683 0.9613325961115772 1.0298964870402538 0.9360945754806742 0.9032866186612736 1.0 12.198531813333465 -6.782251666420727 24.996476301945528 0.9658237104249734 0.9962542746122435 0.10748971619215386 0.04814857839967542 479.55986646456375 575971.5638907644 0.006846819020079934 0.012948949897013264 1.651004791185735e-07 6.782251666420727 0.03043056418727008 AAGS(ph)PSSSDQDEK ddPTM_A549_MK2206_60min_R1 1 AAGSPSSSDQDEK 13 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 AAGS(0.846)PS(0.13)S(0.02)S(0.003)DQDEK 89.62899999999999 0.00018734 2739700.0 657.92 887.46 655.97 831.5 671.69 483.68 434.39 503.85 766.59 1066.2 1077.9 True False 768.9608114003461 932.6279233518605 748.9964097469666 1035.2175373274533 572.8852907823624 534.8626965592007 513.3130401647645 575.2722804759105 592.9585889926809 825.3446794919408 810.2276814734107 0.9490675633322966 1.1510689460225096 0.9244270800337331 1.2776871995349448 0.7070670428595605 0.660138759498497 0.6335417215458466 0.7100131156093922 0.7318419285729378 1.018657716052159 1.0 9.662183565396704 -6.775892568860103 24.99985271488391 0.8136371184812007 1.0701606439152633 0.46430962875488846 0.14986710859128277 198.89658673380268 344033.7321063435 0.024076467873544366 0.045643638079760386 1.675357256792748e-07 6.775892568860103 0.25652352543406265 AAGS(ph)PSSSDQDEK ddPTM_A549_PD325901_60min_R1 2 AAGSPSSSDQDEK 13 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 AAGS(0.702)PS(0.132)S(0.132)S(0.035)DQDEK;AAGS(0.99)PS(0.009)S(0.001)SDQDEK 163.27 8.5432999999999985e-19 5094970.0 2308.87 2630.7400000000002 2788.69 2257.56 3116.61 2360.24 2755.61 2406.99 2568.33 2125.3199999999997 2462.35 True False 2543.2647826997404 2852.4416923828326 2977.947273155255 2397.004353909239 2897.7100653208113 2341.018987975077 2860.4762464776495 2358.980696202874 2460.39202170816 1991.1269324906186 2159.4965601227086 1.1777118934402122 1.3208827210267697 1.3790007023609427 1.109982946105288 1.341845186896781 1.084057752720872 1.3246032891643547 1.0923752969853446 1.1393359300226686 0.9220329262193765 1.0 11.076479303129753 -9.233214838214641 0.272154128247758 0.9553809540134139 1.3021524687473165 0.541843366599327 0.09749992831362127 1.0501326390847718 0.2293987205814185 0.13459360896996095 0.08135905297316229 5.845008698137798e-10 9.233214838214641 0.34677151473390255 AAGS(ph)TVR ddPTM_A549_MK2206_60min_R1 1 AAGSTVR 7 0 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 AAGS(0.5)T(0.5)VR 93.992 0.012079000000000001 14486000.0 3848.8 3821.1 2818.9 1879.0 3507.1 2501.8 2518.0 3274.3 3336.6 5646.7 5520.1 True False 4498.38334587435 4015.577668762306 3218.662407481627 2339.355084351514 2991.2102358272773 2766.538815439565 2975.4880064800695 3738.4420521232005 2580.865427455328 4371.106548196529 4149.306822990419 1.0841288768884896 0.9677707241394758 0.7757108704634009 0.5637941912103606 0.7208939621561903 0.6667472263344727 0.717104840257541 0.9009799013679333 0.6219991766227809 1.0534546454788942 1.0 12.018654626769269 -5.617229664867733 3.36225380347338 0.7799853824795664 1.0654095927409393 0.31235081255074704 0.14482394492679906 0.2352235961238716 5.005512760769763 0.0220460696963528 0.11142801123857292 2.4141838211263385e-06 5.617229664867733 0.2854242102613729 AAGSPS(ph)PLPAPDPAPK ddPTM_A549_MK2206_60min_R1 2 AAGSPSPLPAPDPAPK 16 0 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3KRF7 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 AAGS(0.002)PS(0.998)PLPAPDPAPK;AAGS(0.268)PS(0.732)PLPAPDPAPK 167.89 7.2248e-28 24995800.0 6737.7 6889.8 6575.9 5966.3 8401.6 7091.1 5504.5 7282.200000000001 9247.1 9080.5 9577.6 True False 7874.859039050506 7240.461391284848 7508.461501067238 7428.043767837383 7165.735769532225 7841.475495308778 6504.596398597911 8314.474150802174 7152.64661458435 7029.208743318854 7199.217591687289 1.0938492883092406 1.00572892804979 1.0429552108186066 1.0317848673464616 0.9953492415351184 1.089212181107442 0.903514349407714 1.154913578442557 0.9935311057750618 0.9763850937684202 1.0 12.813624408171483 -2.0000000028480875 0.11676747674901018 0.9814487340994522 1.207544720034647 0.07852981189192887 0.06213245311569351 168.43499079198546 1.3111009811147607 0.22194724767608437 6.211757270725496 0.009999999934420361 2.0000000028480875 0.22609598593519475 AAGSPS(ph)SSDQDEK ddPTM_A549_MK2206_60min_R1 1 AAGSPSSSDQDEK 13 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 AAGS(0.342)PS(0.559)S(0.086)S(0.014)DQDEK 89.62899999999999 0.00018734 1835200.0 864.88 738.72 903.66 762.76 958.43 604.13 684.98 731.26 633.08 1331.6 1377.4 True False 1010.8505997141469 776.3176926717678 1031.812576233583 949.6362342415974 817.4462166245432 668.0586356109621 809.4319994752652 834.9183443898269 489.68839082102073 1030.7906351636357 1035.3535656939196 0.9763337213569645 0.7498092616810186 0.9965799224751177 0.917209604242902 0.7895333958469256 0.6452468584132539 0.781792835119821 0.8064089138769169 0.4729673099573666 0.995592876982825 1.0 10.015907806365194 -6.865718339457906 4.516198581102216 0.7449771228994365 0.9044471462795981 0.10735755449168194 0.15224902076731028 0.35760822980765783 12.67443518359467 0.028084200525039987 0.05463129265852261 1.36232793021109e-07 6.865718339457906 0.15947002338016159 AAGSPS(ph)SSDQDEK ddPTM_A549_PD325901_60min_R1 1 AAGSPSSSDQDEK 13 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 AAGS(0.304)PS(0.605)S(0.08)S(0.011)DQDEK 155.98 2.3444e-18 3488000.0 1631.0 1795.1 2133.5 2027.3 2395.3 1315.8 1726.6 1539.5 1647.2 1850.2 2039.2 True False 1796.577919321259 1946.3793769039985 2278.2921397777222 2152.521716667643 2227.0623913364007 1305.0845610520996 1792.3067078317738 1508.7934647856139 1577.9739122923006 1733.3780562428917 1788.391327553853 1.004577628867505 1.088340871998211 1.2739337888055806 1.2036077806370513 1.2452880737140224 0.7297533492500121 1.0021893308346983 0.8436595735729323 0.8823426327226941 0.9692386836911092 1.0 10.804446739611114 -7.24276072299763 24.99924756740104 0.9261421417851007 1.1673959436282777 0.6160699172597777 0.10084828478278135 468.3909490477986 626888.0090709856 0.015132989341002948 0.026182037253067936 5.717935828133103e-08 7.24276072299763 0.24125380184317702 AAGTDGS(ph)DFQHR ddPTM_A549_MK2206_60min_R1 1 AAGTDGSDFQHR 12 0 A0A3B3ITE9;Q8N5M9 A0A3B3ITE9 JAGN1 Protein jagunal homolog 1 1 AAGT(0.004)DGS(0.996)DFQHR 66.00399999999999 0.0017115 2131700.0 344.9 546.99 373.65 505.53 339.86 432.4 455.36 263.4 549.97 728.38 583.72 True False 403.11068800458895 574.8294546168105 426.639188532942 629.384872694104 289.8670442098198 478.1562809961099 538.0930177246878 300.73775662866905 425.40267312162246 563.8384521181199 438.7662141475639 0.9187368466547804 1.3101041877930155 0.9723610769845114 1.4344424260579738 0.6606412136198185 1.0897746124894168 1.2263775112450175 0.6854168505497696 0.9695429123869436 1.2850543955704217 1.0 8.77730862946671 -6.755549090414475 24.99999564867233 0.969999463826064 1.1563855342671843 0.11599072301923352 0.2232431689359482 189.38111568996808 803776.0469357723 0.02601468764886919 0.05304877912816769 1.755702427410444e-07 6.755549090414475 0.18638607044112032 AAGYKVS(ph)PGRPPGSIK ddPTM_A549_PD325901_60min_R1 2 AAGYKVSPGRPPGSIK 16 2 Q7Z6I8 Q7Z6I8 C5orf24 UPF0461 protein C5orf24 1 AAGYKVS(0.989)PGRPPGS(0.011)IK;AAGY(0.001)KVS(0.992)PGRPPGS(0.007)IK 54.833999999999996 0.0027267 21961000.0 9283.7 8565.2 9722.6 9520.7 10755.900000000001 10085.7 9830.900000000001 9762.3 11858.1 9764.1 11576.6 True False 10226.174389701277 9287.019463572018 10382.43410274333 10108.772015921484 10000.442689840611 10003.565403103175 10205.020279174898 9567.583268123799 11359.745294653549 9147.593059648265 10152.751590113734 1.0072318128672664 0.9147293106841377 1.0226226861349832 0.9956682113413398 0.984998263877407 0.9853058369756796 1.0051482288911768 0.9423635733824371 1.118883407500596 0.9009964420439239 1.0 13.30958315793822 -8.750501483862527 24.97970935499595 1.056139390036323 0.982755879888675 0.0 0.06051675726271569 183.0049559500554 417941.9905447236 0.008257993917514844 0.0093181962426445 1.7762271994075457e-09 8.750501483862527 -0.07338351014764799 AAHTEDINACTLTTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 AAHTEDINACTLTTSPR 17 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACTLT(0.019)T(0.22)S(0.761)PR;AAHTEDINACTLT(0.022)T(0.317)S(0.661)PR 158.02 1.0651e-22 38321000.0 4365.6 4287.8 3613.2 4336.2 5315.799999999999 4070.7999999999997 3963.3 3661.8999999999996 7092.3 6165.700000000001 6469.700000000001 True False 5102.406551327441 4506.030705325436 4125.606091281214 5398.569194659414 4533.85286179768 4501.569354021657 4683.380308213846 4180.985539098415 5485.90537407583 4772.864087735376 4863.094935363688 1.0492097355993433 0.9265767510640734 0.8483498977740354 1.1101097688638235 0.9322978313312764 0.9256593617547806 0.9630452151277195 0.8597375939949111 1.1280687395557836 0.981445797619091 1.0 12.247659040220093 -8.769357585170937 24.999720044806597 1.0604769002966965 0.9516999076906764 0.16565087081513463 0.07978758636876121 169.62868461840114 535557.9830343007 0.01386404907341027 0.014889480782873379 1.7007575784815284e-09 8.769357585170937 -0.10877699260602014 AAHTEDINACTLTTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AAHTEDINACTLTTSPR 17 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACTLT(0.002)T(0.025)S(0.973)PR 147.17 6.0414e-17 16455000.0 3579.3 3771.8 3693.2 4119.3 3812.6 3312.2 3566.1 3394.7 3744.0 4448.3 5779.6 True False 3942.6679010586054 4089.6628231332506 3943.842761015741 4373.739805390925 3544.8161287559656 3285.2265413564105 3701.809886944795 3326.990045409368 3586.6527001107165 4167.433578848372 5068.745839903027 0.7778389419371705 0.8068391969741162 0.7780707270757913 0.8628840236887081 0.6993477757061465 0.6481340049631018 0.7303206757385208 0.6563734206631711 0.7076016066687089 0.8221823919520299 1.0 12.30741310992221 -10.688036624595314 0.9383817446709579 1.000797588882741 0.74044678600314 0.3382984481703071 0.07906550848914493 0.26807209276694555 0.4179912582316066 0.046879496969095276 0.012196267926006579 2.05098920905428e-11 10.688036624595314 -0.260350802879601 AAHTEDINACTLTTS(ph)PRLPVF ddPTM_A549_MK2206_60min_R1 2 AAHTEDINACTLTTSPRLPVF 21 1 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACT(0.011)LT(0.021)T(0.211)S(0.757)PRLPVF;AAHTEDINACT(0.007)LT(0.02)T(0.46)S(0.514)PRLPVF 91.73299999999999 6.479099999999999e-07 6588900.0 772.1700000000001 1146.6999999999998 948.91 769.69 702.19 678.3199999999999 577.8299999999999 674.6400000000001 1183.71 1192.44 1656.0900000000001 True False 902.4934182560269 1205.0621320482937 1083.4797066527333 958.2640845526972 598.8987811854682 750.099372167625 682.8142314473307 770.2722859983497 915.6015749964471 923.0669758144526 1244.8371472412093 0.7249891443680968 0.9680480171393789 0.8703786748764092 0.769790720558419 0.48110612903281313 0.6025682747578547 0.5485169148113663 0.6187735381334148 0.7355191617036738 0.7415162520335618 1.0 10.281741302268692 -10.271261293546821 0.8758821414770716 0.9854961814997379 0.7029051875104345 0.08060457789320352 0.15145610562069547 0.47591276980707015 0.7076823716276579 0.07530530516465984 0.02901679596874043 5.354743920743663e-11 10.271261293546821 -0.28259099398930343 AAHTEDINACTLTTS(ph)PRLPVF ddPTM_A549_PD325901_60min_R1 2 AAHTEDINACTLTTSPRLPVF 21 1 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACT(0.014)LT(0.025)T(0.234)S(0.727)PRLPVF;AAHTEDINACT(0.19)LT(0.045)T(0.171)S(0.593)PRLPVF 79.172 5.1153e-05 9417600.0 1246.96 1170.37 991.19 1340.54 1299.5500000000002 1267.09 1252.19 1408.6399999999999 1428.9 1263.29 1832.48 True False 1373.5504612365653 1269.001187313872 1058.4581139096701 1423.342111212767 1208.2740912041163 1256.7712391423509 1299.8427756746594 1380.543570143298 1368.8483021336003 1183.5256538055799 1607.096577047806 0.8546782320697498 0.7896234771683688 0.6586151255788434 0.8856605953497884 0.7518366403490722 0.7820135124990475 0.808814351445161 0.8590296251388452 0.8517523599285729 0.7364371691835007 1.0 10.650240913763056 -10.063049431341568 0.37045902036206857 1.0361953044847307 0.7752134502504081 0.0 0.09556308012807087 0.7552592035140299 0.18666694244229948 0.07762990148156575 0.021316210178675157 8.648694738420335e-11 10.063049431341568 -0.26098185423432263 AAHVPENS(ph)DTEQDVLTVKPVR ddPTM_A549_MK2206_60min_R1 4 AAHVPENSDTEQDVLTVKPVR 21 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 AAHVPENS(0.973)DT(0.027)EQDVLTVKPVR;AAHVPENS(0.989)DT(0.011)EQDVLTVKPVR;AAHVPENS(0.79)DT(0.21)EQDVLTVKPVR;AAHVPENS(0.993)DT(0.007)EQDVLTVKPVR 182.17 1.1361e-44 82177700.0 7421.4 8994.5 7505.9 6628.799999999999 10613.7 8044.799999999999 7604.300000000001 7610.8 11413.099999999999 11348.0 11802.0 True False 8673.950884190366 9452.281631384303 8570.349485372426 8252.856297578139 9052.43878988337 8896.095396293957 8985.90287834646 8689.654207097472 8828.051072975593 8784.478918471716 8871.23768137043 0.9777610741289949 1.065497506760986 0.9660827263562255 0.9302936742309486 1.020425685233692 1.0028020571442615 1.0129255016148226 0.9795312130285627 0.9951318395531743 0.9902202188674408 1.0 13.114919682560432 AAHVPENS(ph)DTEQDVLTVKPVR ddPTM_A549_PD325901_60min_R1 4 AAHVPENSDTEQDVLTVKPVR 21 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 AAHVPENS(0.999)DT(0.001)EQDVLTVKPVR;AAHVPENS(0.963)DT(0.037)EQDVLTVKPVR;AAHVPENS(0.975)DT(0.025)EQDVLTVKPVR;AAHVPENS(0.998)DT(0.002)EQDVLTVKPVR 211.06 1.7445999999999996e-67 159253000.0 12360.8 13503.3 12172.800000000001 12917.400000000001 15368.8 14785.199999999999 12468.3 13812.3 14851.5 14614.6 15159.7 True False 13615.65931645998 14641.270480835468 12998.919408992868 13715.278460456082 14289.34850748169 14664.794233217428 12942.78797941555 13536.80284096026 14227.34310248246 13691.831661856762 13295.153005256057 1.024107004340395 1.1012487389236696 0.9777186771640705 1.0315998962203694 1.0747787935823372 1.1030180869238513 0.9734967302970335 1.0181757844839145 1.0701150334154015 1.0298363363282756 1.0 13.698612759878085 -11.057564396602437 1.3539885465949706 0.9999137701245585 1.0447149258410173 0.036427711205284874 0.042403511283055015 0.7284885764218436 2.3746908073516972 0.029733808997572556 0.0065493904057840335 8.758618363873948e-12 11.057564396602437 0.04480115571645882 AAHVPENS(ph)DTEQDVLTVKPVRK ddPTM_A549_MK2206_60min_R1 2 AAHVPENSDTEQDVLTVKPVRK 22 2 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 AAHVPENS(0.995)DT(0.005)EQDVLTVKPVRK;AAHVPENS(0.98)DT(0.02)EQDVLTVKPVRK 130.6 2.4716999999999998e-22 13071800.0 1215.32 1319.47 1506.27 1391.01 2342.0 1664.72 1538.6 1295.13 2416.5 2092.28 2131.12 True False 1420.4363042787393 1386.625387087959 1719.8817356122418 1731.8075124448114 1997.494902428641 1840.8795654482972 1818.1437040390142 1478.718643669279 1869.166608357548 1619.6324948484314 1601.9040880801695 0.8867174475976815 0.865610742494443 1.0736483840761433 1.0810931349331452 1.2469503744275816 1.1491821383978937 1.134989115495673 0.9231006117485321 1.166840525763115 1.0110670837912081 1.0 10.645572055508941 -5.781025828623545 6.3384368565907865 1.08974588444741 0.8749898653462795 0.48137784654605875 0.0845980354047337 0.09695236313922 14.054739871648188 0.012557686253676242 0.04237906419530315 1.655671493447087e-06 5.781025828623545 -0.2147560191011304 AAHVPENS(ph)DTEQDVLTVKPVRK ddPTM_A549_PD325901_60min_R1 4 AAHVPENSDTEQDVLTVKPVRK 22 2 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 AAHVPENS(0.994)DT(0.006)EQDVLTVKPVRK;AAHVPENS(0.998)DT(0.002)EQDVLTVKPVRK;AAHVPENS(0.997)DT(0.003)EQDVLTVKPVRK;AAHVPENS(0.98)DT(0.02)EQDVLTVKPVRK 204.59 1.4994999999999997e-61 54271100.0 10387.7 10005.0 11188.800000000001 10716.0 11666.599999999999 13783.399999999998 12002.5 11362.1 13044.9 12464.599999999999 12797.0 True False 11442.251656979435 10848.156462550547 11948.139251720168 11377.90298219822 10847.17826358504 13671.152560271707 12459.261705520008 11135.474002104987 12496.668217861725 11677.58302877805 11223.050126866745 1.0195313687130334 0.966596098201616 1.064607135908414 1.0137977513760519 0.9665089383872651 1.2181316492157934 1.1101493412823586 0.9921967625759677 1.1134823489691166 1.0404999440235239 1.0 13.454177194969796 -5.772209829069323 24.832795089292887 1.05732736112187 0.9930637336679592 0.11778233805830252 0.06823091149692315 294.3472049263381 678664.9374314694 0.009923763964864373 0.03130588675201496 1.6896243935830322e-06 5.772209829069323 -0.0642636274539109 AAIELPSLEVLS(ph)DQEEDREQCGVK ddPTM_A549_PD325901_60min_R1 1 AAIELPSLEVLSDQEEDREQCGVK 24 1 Q9BQI3-2;Q9BQI3 Q9BQI3-2 EIF2AK1 Eukaryotic translation initiation factor 2-alpha kinase 1 1 AAIELPS(0.026)LEVLS(0.974)DQEEDREQCGVK 98.0 1.7385999999999998e-08 4578800.0 1456.9 1789.1 1957.6 1487.7 1899.5 1920.9 1614.2 2026.8 1936.4 1559.8 2036.3 True False 1604.8034154869067 1939.8737358469966 2090.454508005095 1579.591850188158 1766.0856729192567 1905.2568272723659 1675.6292643241327 1986.3738840061596 1855.0198420123897 1461.3139618028665 1785.8480091692372 0.8986226191967193 1.0862479482503167 1.1705668664253002 0.8845051998142731 0.9889339203848743 1.066863931023266 0.9382821246381559 1.1122860813503415 1.0387333258418396 0.8182745420102456 1.0 10.802393584746822 AAIPPPVYEEQDRPRS(ph)PTGPSNSFLANMGGTVAHK ddPTM_A549_MK2206_60min_R1 10 AAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHK 35 2 Q96I25;Q5W012;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 AAIPPPVY(0.001)EEQDRPRS(0.603)PT(0.132)GPS(0.132)NS(0.132)FLANMGGTVAHK;AAIPPPVY(0.022)EEQDRPRS(0.645)PT(0.111)GPS(0.111)NS(0.111)FLANMGGTVAHK;AAIPPPVY(0.012)EEQDRPRS(0.247)PT(0.247)GPS(0.247)NS(0.247)FLANMGGT(0.001)VAHK;AAIPPPVY(0.107)EEQDRPRS(0.786)PT(0.08)GPS(0.014)NS(0.014)FLANMGGTVAHK;AAIPPPVY(0.031)EEQDRPRS(0.583)PT(0.125)GPS(0.125)NS(0.125)FLANMGGT(0.01)VAHK;AAIPPPVY(0.002)EEQDRPRS(0.924)PT(0.051)GPS(0.011)NS(0.011)FLANMGGTVAHK;AAIPPPVYEEQDRPRS(0.957)PT(0.043)GPSNSFLANMGGTVAHK;AAIPPPVY(0.002)EEQDRPRS(0.865)PT(0.054)GPS(0.054)NS(0.026)FLANMGGTVAHK;AAIPPPVY(0.018)EEQDRPRS(0.935)PT(0.035)GPS(0.006)NS(0.006)FLANMGGTVAHK;AAIPPPVY(0.006)EEQDRPRS(0.7)PT(0.206)GPS(0.044)NS(0.044)FLANMGGTVAHK 283.88 1.2022999999999995e-184 190076900.0 17061.2 20798.420000000002 19839.840000000004 17838.43 26923.850000000002 18594.82 18031.22 18273.63 31663.32 30171.25 35868.78 True False 19940.713453708024 21856.970740765584 22653.427641438255 22208.846150797555 22963.387330808422 20562.511510157445 21307.259274107848 20863.973013144805 24491.62857593202 23355.543670156836 26961.57199803306 0.7395975818903574 0.8106712302368766 0.8402116776829963 0.8237222277847066 0.8517080284667259 0.7626599632861745 0.7902825278756849 0.7738411178200924 0.9083902295355318 0.8662530386529651 1.0 14.718616995047329 -9.161198720013607 1.2817855118674566 0.9742561993132844 0.8014748815966316 0.5095204780979803 0.04936823880813469 0.12574240034527437 0.4271433369560051 0.009112912580196982 0.008207841954220982 6.899240432387213e-10 9.161198720013607 -0.17278131771665284 AAIPPPVYEEQDRPRS(ph)PTGPSNSFLANMGGTVAHK ddPTM_A549_PD325901_60min_R1 14 AAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHK 35 2 Q96I25;Q5W012;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 AAIPPPVYEEQDRPRS(0.959)PT(0.041)GPSNSFLANMGGTVAHK;AAIPPPVY(0.001)EEQDRPRS(0.659)PT(0.112)GPS(0.112)NS(0.112)FLANMGGT(0.005)VAHK;AAIPPPVYEEQDRPRS(0.995)PT(0.005)GPSNSFLANMGGTVAHK;AAIPPPVY(0.008)EEQDRPRS(0.699)PT(0.2)GPS(0.061)NS(0.029)FLANMGGT(0.003)VAHK;AAIPPPVYEEQDRPRS(0.973)PT(0.025)GPS(0.001)NS(0.001)FLANMGGTVAHK;AAIPPPVYEEQDRPRS(0.685)PT(0.105)GPS(0.105)NS(0.105)FLANMGGT(0.001)VAHK;AAIPPPVY(0.014)EEQDRPRS(0.246)PT(0.246)GPS(0.246)NS(0.246)FLANMGGT(0.001)VAHK;AAIPPPVY(0.002)EEQDRPRS(0.964)PT(0.028)GPS(0.006)NSFLANMGGTVAHK;AAIPPPVYEEQDRPRS(0.914)PT(0.039)GPS(0.039)NS(0.009)FLANMGGTVAHK;AAIPPPVY(0.031)EEQDRPRS(0.94)PT(0.028)GPSNSFLANMGGTVAHK;AAIPPPVY(0.003)EEQDRPRS(0.98)PT(0.017)GPSNSFLANMGGTVAHK;AAIPPPVYEEQDRPRS(0.966)PT(0.027)GPS(0.004)NS(0.004)FLANMGGTVAHK;AAIPPPVY(0.007)EEQDRPRS(0.989)PT(0.004)GPS(0.001)NSFLANMGGTVAHK;AAIPPPVYEEQDRPRS(0.962)PT(0.028)GPS(0.005)NS(0.005)FLANMGGTVAHK 203.02 2.3801999999999992e-89 428985300.0 39342.81 43402.939999999995 44742.14000000001 47781.62 55955.009999999995 56938.86 51365.450000000004 57767.799999999996 53072.17 54504.6 60523.84 True False 43336.86310855406 47060.658076431166 47778.610676744545 50732.98214746755 52024.92313190506 56475.168802178865 53320.190308002784 56615.57591103757 50841.73125834268 51063.17025418675 53079.79137223272 0.8164475026784787 0.886602167412619 0.9001280796619455 0.9557871430144158 0.9801267447920022 1.0639674222932674 1.0045290105623101 1.0666126306716137 0.957835928589184 0.9620077421950661 1.0 15.695875079819787 -5.983447382004014 1.1828468816069742 0.9945565996307181 0.8254484058893138 0.7466977385629099 0.03580216023515035 0.2721528416610378 0.6025736968365116 0.0058054394672169005 0.04091453535888523 1.038849459111382e-06 5.983447382004014 -0.1691081937414043 AAITETQRKPS(ph)EDEVLNK ddPTM_A549_MK2206_60min_R1 2 AAITETQRKPSEDEVLNK 18 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 AAITETQRKPS(1)EDEVLNK;AAIT(0.001)ET(0.001)QRKPS(0.998)EDEVLNK 160.67 1.7909000000000003e-23 30413000.0 3413.2 5714.0 5304.9 4216.9 6405.700000000001 2774.2 2777.0 2491.8999999999996 6751.6 6824.0 8111.8 True False 3989.2647152718555 6004.818193532701 6057.214589183473 5250.040689303836 5463.430015579477 3067.7640026350773 3281.544953929768 2845.134456123692 5222.373380089724 5282.453660526172 6097.416185709261 0.654254948944053 0.9848135686729756 0.9934067816102156 0.8610271186028846 0.8960237991272958 0.5031252434145973 0.538186151967262 0.46661313078676475 0.8564895721452627 0.8663429721111793 1.0 12.57398230672124 -5.227322694427864 21.493679857659075 0.8500747043113903 0.6542524100847935 0.0 0.19734706882236208 5297.602505057594 3337129.0984959216 0.030734369401902006 5.1182725108721385 5.92484926093529e-06 5.227322694427864 -0.1958222942265968 AAITETQRKPS(ph)EDEVLNK ddPTM_A549_PD325901_60min_R1 2 AAITETQRKPSEDEVLNK 18 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 AAITET(0.001)QRKPS(0.999)EDEVLNK;AAITET(0.001)QRKPS(0.999)EDEVLNK 142.99 2.2825e-17 43231000.0 4033.1 4451.6 4708.6 5354.3 4519.4 6896.6 6429.3 9000.6 9467.2 9590.3 10407.1 True False 4442.5373429886995 4826.75195489156 5028.153911111967 5685.022950502418 4201.972935083593 6840.436376160445 6673.970529747951 8821.075972165898 9069.326507074833 8984.766821309164 9127.09267604242 0.48674178083562736 0.5288378376568076 0.5509042243331548 0.6228733674880892 0.4603846026581163 0.7494649850675683 0.7312263353330863 0.9664716120742608 0.9936709124123153 0.9844062222456833 1.0 13.155939665154223 -7.890920868207266 1.1537729061814337 1.0012517333338304 0.5322800586190423 0.9251544194243588 0.05709789875615079 0.07043689584577251 0.18875047807025191 0.009257873634192535 0.014376586991992544 1.2855208703890211e-08 7.890920868207266 -0.4689716747147882 down AAKLS(ph)EGS(ph)QPAEEEEDQETPSR ddPTM_A549_MK2206_60min_R1 1 AAKLSEGSQPAEEEEDQETPSR 22 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 AAKLS(1)EGS(1)QPAEEEEDQETPSR 144.4 2.1684999999999996e-27 35118000.0 3551.4 4136.5 3838.4 3547.1 6538.5 6340.2 5931.3 5959.1 9562.7 8595.0 9209.2 True False 4150.789496606259 4347.030181579985 4382.742837588238 4416.139659235368 5576.695311498575 7011.115755715851 7008.940434009228 6803.820673978362 7396.763718493987 6653.3835305132525 6922.301479010051 0.599625646064733 0.627974698120436 0.6331337707376201 0.6379582964749628 0.8056128916673666 1.0128301659462688 1.0125159176123557 0.9828841888220343 1.0685411117852366 0.9611519450124765 1.0 12.75703605956639 -7.035300263903835 2.0012155045623343 1.028185823585197 0.6193675257562465 0.9708701386792468 0.030839239370832296 0.033934113982121934 0.26955555914100887 0.004551825593990058 0.009213545824098116 9.219337972281421e-08 7.035300263903835 -0.4088182978289505 AAKLS(ph)EGS(ph)QPAEEEEDQETPSR ddPTM_A549_PD325901_60min_R1 2 AAKLSEGSQPAEEEEDQETPSR 22 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 AAKLS(1)EGS(1)QPAEEEEDQETPSR;AAKLS(1)EGS(1)QPAEEEEDQETPSR 184.6 6.310399999999998e-50 127390000.0 13453.8 13752.0 14422.2 15164.5 15978.6 14320.9 15547.5 15838.5 16239.5 17322.3 17549.6 True False 14819.619871835903 14910.929302648205 15400.97721973391 16101.176723921697 14856.318259177486 14204.275338479267 16139.168620418439 15522.58869243712 15557.010289382473 16228.567021757779 15391.11045608038 0.9628687880659901 0.9688013964422901 1.0006410689912002 1.0461348302234295 0.9652531766028863 0.9228882723577463 1.0486032613743301 1.0085424789024757 1.0107789385161974 1.0544117052546105 1.0 13.909809704242578 -7.788431231803407 24.999637047011944 1.0084999990938381 0.9809359667061984 0.26923452211882937 0.033739580455315055 318.6185247211671 295100.7425913012 0.004908371146515513 0.00678282602075387 1.6276790294623755e-08 7.788431231803407 -0.027564032387639714 AAKLS(ph)EGSQPAEEEEDQETPSR ddPTM_A549_MK2206_60min_R1 4 AAKLSEGSQPAEEEEDQETPSR 22 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AAKLS(0.999)EGS(0.001)QPAEEEEDQETPSR;AAKLS(0.997)EGS(0.003)QPAEEEEDQETPSR;AAKLS(0.953)EGS(0.047)QPAEEEEDQETPSR;AAKLS(0.573)EGS(0.427)QPAEEEEDQETPSR 242.75 1.1127999999999998e-98 200302000.0 6900.1 7198.5 8295.2 7559.799999999999 12828.400000000001 10795.4 11196.5 11533.4 18297.8 18401.399999999998 18495.6 True False 8064.668188751713 7564.87290272054 9471.584093987585 9411.951339372314 10941.359353678727 11937.76206259344 13230.75912015651 13168.294769556154 14153.377515582344 14244.510959672663 13902.632067408485 0.5800821132034033 0.5441324251437711 0.6812799222523863 0.6769906082342827 0.7869991308572584 0.8586692077235338 0.951672967824055 0.9471799804316324 1.0180358256593494 1.0245909472829706 1.0 13.76307042157178 -6.975194491863593 0.6734357027600145 1.0113134214267185 0.5451295393359092 0.9762595177061877 0.026390805112089095 0.07573200916925564 0.061840546805564965 0.0047698347988199335 0.017593190862754005 1.0587794614784574e-07 6.975194491863593 -0.4661838820908093 down AAKLS(ph)EGSQPAEEEEDQETPSR ddPTM_A549_PD325901_60min_R1 2 AAKLSEGSQPAEEEEDQETPSR 22 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AAKLS(0.999)EGS(0.001)QPAEEEEDQETPSR;AAKLS(0.72)EGS(0.28)QPAEEEEDQETPSR 317.45 4.0913999999999985e-196 335910000.0 19394.4 18551.6 20536.5 19997.2 24421.7 22369.9 24006.7 24544.1 25093.0 25610.3 28201.5 True False 21363.30521059734 20115.008438845856 21930.23038600666 21232.381627063678 22706.40404229124 22187.726951116703 24920.288105470296 24054.54867102602 24038.428473258075 23993.261287318855 24732.894284037837 0.8637608265840861 0.8132897107730622 0.886682736527121 0.858467326275141 0.9180649778196619 0.8970938336738156 1.0075767040961883 0.972573140643325 0.9719213690559476 0.970095170091099 1.0 14.59414345570685 -7.228620421001287 0.8446710863450411 0.9885866665793999 0.8439367481763651 0.8253459069106559 0.025784155993926423 0.15368041081900968 0.2144190615410869 0.004248667451027863 0.010878586954151018 5.907171490480932e-08 7.228620421001287 -0.14464991840303476 AAKNS(ph)EEEEEEK ddPTM_A549_MK2206_60min_R1 8 AAKNSEEEEEEK 12 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK 187.98 1.7195999999999998e-19 858156400.0 76057.2 74344.7 66009.6 62327.0 4988.563 2528.51 3880.95 4370.14 6816.050000000001 84801.7 88647.2 True False 88893.79593999009 78128.52767811195 75370.75385891629 77597.11779796523 4254.751991009448 2796.0752499109008 4586.068379169511 4989.620727992453 5272.22555799523 65644.93707266157 66633.65370174387 1.3340675619842777 1.1725085349187034 1.1311214329665935 1.1645334374923288 0.06385289946809711 0.04196190805364354 0.06882510750043846 0.07488139177128553 0.0791225644265887 0.9851619028200398 1.0 16.023963382158467 -6.741945512379036 23.315798348246386 0.41073926512125525 1.1935954606228878 0.5917384232592893 0.34352672929557276 84.11256482030373 100601.9949396258 0.061828597839003616 0.12850955867338862 1.8115673619220414e-07 6.741945512379036 0.7828561955016325 AAKNS(ph)EEEEEEK ddPTM_A549_PD325901_60min_R1 6 AAKNSEEEEEEK 12 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK 218.21 4.3064999999999996e-32 2603955800.0 59767.8 51909.9 58889.6 53426.8 61337.700000000004 46380.4 55355.5 51232.6 49519.600000000006 54896.200000000004 56176.100000000006 True False 65835.38305727119 56284.52945080991 62886.202387932615 56726.852094933565 57029.551555577505 46002.693399772616 57462.08384419192 50210.72560180284 47438.463421047694 51430.0445633559 49266.795829638126 1.3363033245540532 1.1424434754279276 1.2764418982186228 1.1514215840439859 1.1575656706553956 0.9337464031321907 1.166345058097398 1.019159552722462 0.9628891553062897 1.0439088578278597 1.0 15.588328025524499 -6.720849373294141 0.5437985597694937 0.9820506669058987 1.3034285946657935 0.6250711928989374 0.07488214825738686 0.5154111276962585 0.23338546100917582 0.014438856643203348 0.07948674838028176 1.901737746793384e-07 6.720849373294141 0.3213779277598948 AAKNS(ph)EEEEEEKK ddPTM_A549_MK2206_60min_R1 4 AAKNSEEEEEEKK 13 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK 138.05 3.4852e-09 118443000.0 32712.399999999998 37825.9 34627.6 33369.6 4244.9 3573.1200000000003 4603.49 4894.29 5997.799999999999 49800.0 45643.6 True False 38233.453378606326 39751.07674251816 39538.31437131887 41545.15349801829 3620.4808331850286 3951.225186754905 5439.88454446026 5588.070595634506 4639.307876518478 38550.145412397884 34309.03442072524 1.1143844186856637 1.158618346848768 1.1524169956655717 1.2109100182930794 0.10552558223550546 0.11516573559901958 0.1585554544541236 0.1628746098508354 0.13522117293152344 1.1236149913070912 1.0 15.066300903403816 -6.746023010796237 24.95183222756794 0.4518642528354926 1.1585734243015204 0.534704471881225 0.3383860409013528 181.29205083940863 293424.643356747 0.056887085555730584 0.11808049383622368 1.7946385366173686e-07 6.746023010796237 0.7067091714660279 AAKNS(ph)EEEEEEKK ddPTM_A549_PD325901_60min_R1 4 AAKNSEEEEEEKK 13 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK 182.7 1.3813e-25 347149000.0 42088.1 40901.5 40808.5 41826.7 50458.5 43261.3 45456.3 46195.6 39846.7 44542.7 47390.2 True False 46360.85292837836 44348.41294882675 43578.0102114456 44410.24026367209 46914.469032375004 42908.99431603833 47186.164371141815 45274.19251825286 38172.08176963183 41730.26632029528 41561.50583122922 1.1154757750269704 1.0670550082789219 1.0485185591784114 1.0685426183548512 1.1287961803617708 1.0324215510929977 1.1353333674374773 1.0893299367472373 0.9184479966784413 1.004060499870995 1.0 15.342960305588754 -8.75026261528037 24.999020272396454 0.9614893321538565 1.084569558649052 0.6360784415988002 0.03722348501135855 91.36583653186065 204357.27584000208 0.006775788475996691 0.007648974162592684 1.7772044201491457e-09 8.75026261528037 0.12308022649519557 AAKNS(ph)EEEEEEKKK ddPTM_A549_MK2206_60min_R1 4 AAKNSEEEEEEKKK 14 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK 126.63 3.0787e-08 5572746000.0 35497.8 42917.2 35782.600000000006 42107.1 4782.238000000001 2761.7000000000003 2731.01 4492.45 4991.79 54557.0 54068.0 True False 41488.960802114554 45101.50216581758 40857.110738923744 52423.34139025954 4078.7771251923705 3053.941260931906 3227.19916623397 5129.268545051113 3861.15753525062 42232.53580851794 40641.42339911341 1.0208540285284307 1.1097421889707109 1.0053070813414238 1.2898992457878125 0.10036009529334912 0.07514356057220495 0.07940664711818068 0.12620789618217473 0.09500547009224217 1.0391500168136147 1.0 15.310663310569 -6.754390397595339 24.999884740903603 0.42565790213539917 1.0994612685380605 0.515702507630544 0.3444664940620873 139.99453001866544 496499.28260521253 0.06036149111469464 0.12356982438796846 1.7603928760952378e-07 6.754390397595339 0.6738033664026613 AAKNS(ph)EEEEEEKKK ddPTM_A549_PD325901_60min_R1 9 AAKNSEEEEEEKKK 14 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK 169.19 5.0267e-23 16363002900.0 86053.6 92869.20000000001 88646.90000000001 116383.59999999999 102613.8 101446.19999999998 103477.5 106159.1 122281.09999999999 105736.1 105377.7 True False 94789.69812268786 100695.61340848579 94663.011711114 123572.35064566687 95406.56068639213 100620.05578158045 107415.39288756075 104041.6734702972 117142.05061097984 99059.90460096426 92416.91094427805 1.0256748159418623 1.0895799521929412 1.0243040017664107 1.3371183843200918 1.032349596102781 1.0887623785894383 1.162291530738632 1.1257860970166835 1.267539126920284 1.071880715215547 1.0 16.49586924745845 AAKNS(ph)VDLDDYEEEQDHLDACFK ddPTM_A549_PD325901_60min_R1 2 AAKNSVDLDDYEEEQDHLDACFK 23 1 O75151;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 AAKNS(1)VDLDDYEEEQDHLDACFK;AAKNS(1)VDLDDYEEEQDHLDACFK 171.22 9.2631e-41 9707600.0 3447.7 3053.5 3110.2 3487.0 3969.7 3603.8 3484.3 3859.8 4533.8 5727.5 6003.0 True False 3797.7079659374053 3310.829161259184 3321.276875151946 3702.3840704484123 3690.881966721541 3574.451847636081 3616.896943182118 3782.813261045479 4343.260152714201 5365.8646725387325 5264.669056152304 0.7213573969097631 0.6288769770609117 0.6308614729107606 0.7032510554717202 0.7010662830569319 0.6789509102113396 0.6870131635255219 0.7185282152968144 0.8249825594713608 1.0192216481809377 1.0 12.362127129103172 -9.393296594800882 0.5194670718150132 0.9973531781426025 0.6602723812787591 0.9342224356778395 0.03321549307369627 0.13395489116239365 0.08282858083550326 0.01767255769444517 0.010235762034640718 4.042996870806467e-10 9.393296594800882 -0.3370807968638434 AAKNSEEEEEEK ddPTM_A549_PD325901_60min_R1 1 AAKNSEEEEEEK 12 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 64.55 0.0064581000000000005 2960700.0 2188.5 1846.4 1975.1 2010.8 2400.4 1875.2 1843.0 2055.8 1742.5 2491.6 2139.4 False True 2410.674908911452 2002.0026079413637 2109.142163241143 2135.002549141862 2231.8041849304473 1859.9289929205777 1913.136373528298 2014.7954562561004 1669.2687847069762 2334.279950780884 1876.2673627739869 1.2848248371955715 1.0670135012003206 1.1241160002500177 1.1378988898391034 1.1894915560599069 0.9912920886556096 1.0196501903117912 1.0738317450010457 0.889675329766984 1.2441083808704874 1.0 10.873649707112728 -7.601191062707142 0.9661424490968787 0.9530842240167613 1.1584052439997787 0.009209269568428713 0.11176489479151488 0.26953604758435923 0.5057746068156344 0.013132533616264947 0.02481320737191371 2.5050069624730697e-08 7.601191062707142 0.20532101998301744 AAKNSEEEEEEKKK ddPTM_A549_MK2206_60min_R1 1 AAKNSEEEEEEKKK 14 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 62.891000000000005 0.0016647000000000003 6415800.0 1970.6 1962.4 2389.9 1789.1 168.76 359.35 205.9 211.16 512.34 2792.5 2425.2 False True 2303.18910345562 2062.277777911897 2728.823756656972 2227.4295803157515 143.93562755502023 397.3761784827755 243.3093647872304 241.09257665037862 396.2958080388606 2161.672310524522 1822.9559078850684 1.2634365392455937 1.1312823140656658 1.4969225228397656 1.2218779240250193 0.0789572731476591 0.21798452544241614 0.1334696926759516 0.1322536522181088 0.2173918778423059 1.1858061410999352 1.0 10.832063951774275 -6.681264827659083 7.937490312848742 0.48280656683974027 1.2900304145312498 0.5706747357572499 0.3544005392166474 0.1685626649821242 14.601255216370145 0.0566894861815017 0.11819787874577709 2.083220172583569e-07 6.681264827659083 0.8072238476915095 AAKNSEEEEEEKKK ddPTM_A549_PD325901_60min_R1 2 AAKNSEEEEEEKKK 14 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 ; 84.566 6.6376e-05 69875000.0 3628.1000000000004 4155.200000000001 3794.2 4128.9 4242.8 4449.5 4022.3999999999996 4417.2 4223.1 4100.3 4995.5 False True 3996.4220411339443 4505.373286675666 4051.697228378081 4383.932775587741 3944.800364865394 4413.2647472270255 4175.474633141739 4329.095480773638 4045.6177932258456 3841.406358238425 4381.085169083596 0.9121991211985242 1.0283692539166198 0.9248159010854349 1.0006499774357824 0.9004162696272209 1.007345115856344 0.9530685827810864 0.9881331482261887 0.9234282459914102 0.8768161790933507 1.0 12.09707254584662 AAKPGPAEAPS(ph)PTAS(ph)PSGDASPPATAPYDPR ddPTM_A549_MK2206_60min_R1 2 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 AAKPGPAEAPS(0.746)PT(0.262)AS(0.393)PS(0.325)GDAS(0.271)PPAT(0.002)APYDPR;AAKPGPAEAPS(0.744)PT(0.286)AS(0.477)PS(0.4)GDAS(0.084)PPAT(0.007)APY(0.002)DPR 68.092 0.0001601 41265000.0 1256.0 1339.02 1360.32 804.02 1751.27 1301.5 1489.16 925.79 1465.4099999999999 1967.62 1812.27 True False 1467.9820937482295 1407.1703985831575 1553.2338309785407 1001.0049360938291 1493.660502893341 1439.2238661342208 1759.721096000738 1057.023567612966 1133.4969747789103 1523.1332754285609 1362.2333428924921 1.0776289549859324 1.0329877813702963 1.140211285447241 0.7348263359699813 1.0964791830170473 1.056517867253382 1.2917912376628824 0.775948976089911 0.8320872343148674 1.118114810047464 1.0 10.411758134707876 -8.295139425987603 24.996653456052805 0.9076354434021556 1.0520136169074639 0.14068264838487643 0.14917263423996902 783.4707427136992 581129.0649441382 0.022944009872251245 0.027738747097183845 5.068279700001636e-09 8.295139425987603 0.14437817350530824 AAKPGPAEAPS(ph)PTASPSGDASPPATAPYDPR ddPTM_A549_MK2206_60min_R1 1 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPS(0.657)PT(0.23)AS(0.111)PS(0.001)GDASPPATAPYDPR 134.74 1.654e-28 58510000.0 1825.9 2466.7 1755.0 2226.8 2940.9 1831.7 1814.3 2035.3 2836.4 3165.7 3387.9 True False 2134.0672810309634 2592.24449387244 2003.8853897372217 2772.3660999648523 2508.297505786674 2025.5292782159452 2143.9348253204093 2323.810007844835 2193.9599288000613 2450.5661713258637 2546.590928716734 0.8380094568648889 1.0179273257596624 0.7868893928507826 1.0886578086421952 0.9849628683985939 0.7953885547046381 0.841884262267741 0.9125179790913016 0.861528211720141 0.9622928220201983 1.0 11.314351515766246 -10.951461768927329 1.220144718403875 0.9998701594950461 0.9021075439561443 0.095534613719096 0.09063601200437078 0.7560910327309434 2.005193913377313 0.061354274173929156 0.014378663126227135 1.1182482599790948e-11 10.951461768927329 -0.09776261553890175 AAKPGPAEAPSPT(ph)AS(ph)PSGDASPPATAPYDPR ddPTM_A549_PD325901_60min_R1 2 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 AAKPGPAEAPS(0.111)PT(0.864)AS(0.389)PS(0.316)GDAS(0.316)PPAT(0.003)APY(0.001)DPR;AAKPGPAEAPS(0.157)PT(0.749)AS(0.756)PS(0.167)GDAS(0.159)PPAT(0.006)APY(0.005)DPR 89.40299999999999 2.6249e-09 69313000.0 1818.38 1395.38 1331.75 1950.1 2015.4299999999998 1987.2 1527.02 1900.56 1506.14 1350.62 2235.3 True False 2002.9805989793942 1512.973569686536 1422.1305634633147 2070.5532480015627 1873.8731496560454 1971.0169020540595 1585.1315817174066 1862.6518398395226 1442.8421735429358 1265.3416227017485 1960.3722707341747 1.0217348148008962 0.7717787036030231 0.7254390325214689 1.0562041092461099 0.955876175984812 1.0054299030234184 0.8085870247102416 0.9501521051111098 0.7360041738412165 0.6454598657569607 1.0 10.93691192989251 -4.73260947005363 5.6869499959193295 0.8841490635361213 5.589188065110636 0.0896283424712011 0.13132667668369463 1835.1662798140896 1098.1065462848705 0.017125219009415608 106670.42768351804 1.850932281794644e-05 4.73260947005363 4.705039001574515 AAKPGPAEAPSPTASPSGDAS(ph)PPATAPYDPR ddPTM_A549_MK2206_60min_R1 3 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPSPT(0.003)AS(0.056)PS(0.259)GDAS(0.682)PPATAPYDPR;AAKPGPAEAPS(0.022)PT(0.176)AS(0.176)PS(0.162)GDAS(0.4)PPAT(0.056)APY(0.007)DPR;AAKPGPAEAPSPTAS(0.003)PS(0.228)GDAS(0.765)PPAT(0.002)APY(0.001)DPR 133.23 2.0863e-28 164297000.0 3031.69 3191.7599999999998 3640.96 2995.55 5239.0599999999995 4113.84 2761.12 3642.74 5935.5199999999995 5403.66 5963.0 True False 3543.3651542958323 3354.2069508907857 4157.302876705208 3729.4598844753514 4468.401214140818 4549.163818254017 3262.7797634838157 4159.1095504233745 4591.134197077758 4182.96945299514 4482.2225295722665 0.7905375359919874 0.7483356590978704 0.9275092544550516 0.8320559409689214 0.9969164147160791 1.0149348427571576 0.7279379240894537 0.9279123298727147 1.0242985855313802 0.9332355601260869 1.0 12.129998560984916 -2.552670473832255 0.195404617354655 1.0299174092833772 6.091112661654474e-10 0.2684029271695012 0.08928029152587583 27.703873450703064 0.36773398990425676 0.07625747939754424 8.393028075208033 0.002801105886333204 2.552670473832255 -1.029917408674266 AAKPGPAEAPSPTASPSGDAS(ph)PPATAPYDPR ddPTM_A549_PD325901_60min_R1 2 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPSPTAS(0.005)PS(0.093)GDAS(0.902)PPATAPYDPR;AAKPGPAEAPSPT(0.001)AS(0.016)PS(0.422)GDAS(0.562)PPATAPYDPR 184.03 2.0046999999999997e-67 371300000.0 8770.7 7233.0 8369.3 9232.9 9085.2 8996.3 9129.5 9804.4 9582.8 10534.2 10763.599999999999 True False 9661.095007351918 7842.55029421571 8937.291026689334 9803.195263562708 8447.086894238499 8923.037115513758 9476.928118354084 9608.84355059699 9180.068241084655 9869.06881422218 9439.74543608212 1.023448680133229 0.830801036671884 0.9467724619487913 1.0385020793136381 0.8948426577215397 0.9452624730118976 1.0039389496807656 1.017913418922137 0.9724910807440967 1.0454803978610516 1.0 13.204532239264687 -7.748582470443797 22.7131113250218 0.9906434059296175 0.9431729808824904 0.19969156040907965 0.05629225333131646 107.59599385000624 190077.47371432083 0.007820408948248257 0.011545722247188561 1.7840931656165877e-08 7.748582470443797 -0.047470425047127174 AAKPTT(ph)TPEVK ddPTM_A549_MK2206_60min_R1 1 AAKPTTTPEVK 11 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAKPT(0.058)T(0.471)T(0.471)PEVK 59.225 0.0039116 187020000.0 7446.5 7951.0 7967.9 6881.3 11455.0 9128.6 8106.2 8545.5 12564.0 12175.0 13169.0 True False 8703.287150554288 8355.67193853317 9097.868032414372 8567.218808913294 9769.984674346739 10094.582392925731 9578.991611647629 9756.850794496168 9718.274060585245 9424.65904409527 9898.773854089744 0.8792288094306212 0.8441118124019945 0.9190904011465548 0.8654828300147185 0.9869893805393084 1.0197810902362505 0.9676947622851293 0.985662561678289 0.9817654392185226 0.952103683043674 1.0 13.273034116502975 -6.766403333316089 24.951269650015607 0.9908711555384739 0.8776388333544928 0.828555473306478 0.023504129236151666 27.23950452405294 136920.10584993893 0.0027984372597199664 0.005407890263293796 1.7123662783655955e-07 6.766403333316089 -0.11323232218398116 AAKPTT(ph)TPEVK ddPTM_A549_PD325901_60min_R1 1 AAKPTTTPEVK 11 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAKPT(0.028)T(0.486)T(0.486)PEVK 85.287 0.0001754 397560000.0 11099.0 11201.0 11970.0 11742.0 13822.0 11488.0 11653.0 12924.0 11456.0 11755.0 11603.0 True False 12225.762309348045 12144.947579912923 12782.356181457393 12467.276671983156 12851.190403311379 11394.44553683426 12096.461291766269 12666.220681318135 10974.54415931313 11012.787293879152 10175.904557477126 1.2014423130929142 1.1935005395651996 1.2561395509615978 1.22517625844106 1.262903983692387 1.1197476816409178 1.188735725992825 1.2447267571914435 1.0784834013846145 1.082241606303893 1.0 13.31286942392624 -9.044487366074602 0.9202641211267328 1.0164824754335056 1.2168539543968782 0.6582492665991331 0.047963881026502425 0.155387321274116 0.27420757033282345 0.011252539530537623 0.010145646231852323 9.026359653905493e-10 9.044487366074602 0.2003714789633726 AAKPTTT(ph)PEVK ddPTM_A549_MK2206_60min_R1 1 AAKPTTTPEVK 11 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAKPT(0.031)T(0.279)T(0.691)PEVK 76.759 0.00047595 212400000.0 11374.0 11019.0 12141.0 10560.0 16518.0 12840.0 12310.0 11545.0 19622.0 19205.0 18670.0 True False 13293.653132398373 11579.820034045655 13862.776362848788 13147.200474056415 14088.224081262279 14198.72027749781 14546.567656779049 13181.53910507966 15177.648329895224 14866.577161548228 14033.723734213343 0.9472648446106485 0.8251423680099086 0.987818815974851 0.9368290785149461 1.003883527143695 1.0117571463147885 1.0365436809416038 0.939275943771352 1.0815125491528 1.0593465742313597 1.0 13.77661024667431 -6.466504230067302 0.7895123896029875 1.0319707304486194 0.8846461460057266 0.4756050293938544 0.04891541092554019 0.5110837963663636 0.5140321399508068 0.008335834145871798 0.04613883138825264 3.4158262362438627e-07 6.466504230067302 -0.14732458444289287 AAKPTTT(ph)PEVK ddPTM_A549_PD325901_60min_R1 3 AAKPTTTPEVK 11 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAKPT(0.022)T(0.064)T(0.914)PEVK;AAKPT(0.011)T(0.096)T(0.893)PEVK;AAKPT(0.099)T(0.069)T(0.832)PEVK 93.959 0.00012148 334459500.0 14444.8 14370.2 15796.6 14440.8 17560.7 16143.199999999999 16513.1 16055.9 15591.2 15066.9 17030.3 True False 15911.225462300274 15581.22718622128 16868.652268672497 15332.775418563655 16327.297013126179 16011.735131460897 17141.51505681504 15735.652478890113 14935.956083858491 14115.573362666766 14935.681063966444 1.0653163651631135 1.0432217399052708 1.1294196894287938 1.0265869599716637 1.0931739197696932 1.0720458653934786 1.1476888789604882 1.053561093832786 1.0000184136157482 0.945090706089175 1.0 13.866475405293508 -8.649705041247856 4.101285385865134 0.9999727705075471 1.081775796503635 0.577776908734788 0.03664458965371675 0.11128270499706754 3.4327329971826193 0.005251472239850122 0.00593715073233555 2.2402421219315693e-09 8.649705041247856 0.08180302599608791 AAKT(ph)PLK ddPTM_A549_MK2206_60min_R1 2 AAKTPLK 7 1 O94776;O94776-2 O94776 MTA2 Metastasis-associated protein MTA2 1 AAKT(1)PLK;AAKT(1)PLK 46.606 0.024354 40033000.0 10321.0 9251.6 7934.2 7848.2 15032.6 12595.5 12107.9 11031.4 16622.9 13235.7 14066.1 True False 12062.93247577665 9722.466923221411 9059.388865671266 9771.009352319088 12821.3244535648 13928.347449783772 14307.748702803825 12595.134732245626 12857.839691316656 10245.746177407133 10573.099165389312 1.1409079104511057 0.9195475017436309 0.8568338122966702 0.924138627613005 1.2126363569477319 1.3173382025374125 1.3532218395945592 1.1912434126670617 1.2160899552901543 0.9690390695422815 1.0 13.368110698104173 -6.755684080465211 24.9944917125756 1.1533604267700737 0.9500474576260846 0.3947711311252873 0.1278951539828282 134.53826662048817 584275.3430490055 0.020580406006721393 0.04194190498031596 1.7551567941127946e-07 6.755684080465211 -0.2033129691439891 AAKT(ph)PLK ddPTM_A549_PD325901_60min_R1 2 AAKTPLK 7 1 O94776;O94776-2 O94776 MTA2 Metastasis-associated protein MTA2 1 AAKT(1)PLK;AAKT(1)PLK 45.368 0.028375 27408000.0 9795.5 9787.4 9673.3 8597.3 9173.4 8574.1 8414.8 9397.6 9132.4 10298.7 12618.400000000001 True False 10789.931948934032 10612.21854688329 10329.788308278343 9128.335695115045 8529.092030511976 8504.275372333796 8735.029818755247 9210.157495725422 8748.596986776465 9648.438324412858 11066.416794628058 0.9750158654942186 0.9589570629614053 0.9334356820260652 0.8248682355381907 0.7707184889920495 0.7684759692461615 0.7893277454537471 0.8322619386788581 0.7905537220524058 0.871866522242003 1.0 13.433900545711873 -6.070934958519795 4.532340326738019 0.8634552788629817 0.9633618291864577 0.3446386132621325 0.06730942405888113 0.31203292316667597 12.15474828163048 0.013764147846296744 0.03923833294214319 8.493076608363458e-07 6.070934958519795 0.09990655032347606 AALAPAKES(ph)PR ddPTM_A549_MK2206_60min_R1 6 AALAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR 117.7 6.0136e-06 3871478700.0 25927.31 30303.000000000004 30458.46 29361.999999999996 35735.4 28230.48 26956.76 26724.890000000003 42449.0 39085.4 39639.700000000004 True False 30303.20606613008 31845.293265422028 34777.92762843055 36555.69131811027 30478.769998398147 31217.810655724003 31854.454358046747 30513.224999043086 32834.369277123755 30255.98099401077 29796.068489935547 1.0170202849535612 1.0687750055407028 1.1671985396388038 1.2268629108050941 1.0229124694317708 1.0477157637850338 1.0690824653194255 1.0240688300656102 1.1019698551241577 1.0154353418884967 1.0 14.86283436311416 AALAPAKES(ph)PR ddPTM_A549_PD325901_60min_R1 7 AALAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR 114.7 6.2201e-06 7071465000.0 55494.200000000004 72038.09999999999 53995.299999999996 85360.9 70430.8 59050.0 61706.7 58345.1 96221.5 71785.4 66627.4 True False 61127.93033132914 78109.00350473388 57659.7457581158 90633.44892433035 65483.98358106945 58569.11637796512 64054.98223570188 57181.36120965448 92177.6449742797 67252.85759302694 58432.65218588743 1.0461262332722365 1.336735550805593 0.9867726964486766 1.5510753925049463 1.120674505287731 1.0023354098602877 1.0962189775663194 0.9785857576299581 1.5775023300507025 1.1509465183794918 1.0 15.834487152463936 AALAPAKES(ph)PRK ddPTM_A549_MK2206_60min_R1 4 AALAPAKESPRK 12 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AALAPAKES(1)PRK;AALAPAKES(1)PRK;AALAPAKES(1)PRK;AALAPAKES(1)PRK 103.79 3.8845e-05 892285000.0 36899.200000000004 40950.9 45868.200000000004 40398.3 54858.8 41876.3 43563.100000000006 45531.4 60309.6 58898.4 61319.700000000004 True False 43126.8828611741 43035.12589456395 52373.000474954315 50295.88531354862 46789.14319101292 46307.62227076178 51477.95138010008 51985.615384064484 46649.57189464119 45593.21053328467 46092.32615237503 0.9356629717190323 0.9336722506105596 1.1362629063635499 1.091198676918088 1.0151178535952883 1.004670975330579 1.116844292256392 1.1278583600273726 1.0120897726103901 0.9891713944433971 1.0 15.492238957894703 -3.5778329206933908 16.552828513162392 1.0253989239018488 0.48018590389065774 0.0 0.07046402450827069 0.0 0.0 0.009367358562161048 0.0 0.00026434255253822295 3.5778329206933908 -0.5452130200111911 AALAPAKES(ph)PRK ddPTM_A549_PD325901_60min_R1 4 AALAPAKESPRK 12 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AALAPAKES(1)PRK;AALAPAKES(1)PRK;AALAPAKES(1)PRK;AALAPAKES(1)PRK 90.367 5.6001e-05 1379408000.0 16105.0 16532.6 17635.1 14937.8 18921.1 18381.4 20172.7 19023.0 21546.4 18896.300000000003 19950.2 True False 17739.96774412563 17925.860223164753 18831.92393447111 15860.473979794753 17592.147210251398 18231.70797273376 20940.383137425 18643.571341745203 20640.87973762435 17703.18439313727 17496.451874737577 1.0139180144140914 1.0245425959218155 1.0763281646641607 0.9064965910428419 1.005469413810236 1.0420231543663883 1.1968359806515958 1.065562976723521 1.1797180299982355 1.0118156823954796 1.0 14.094774765509028 -7.5296391982588675 24.98352818808576 1.0940552952224027 1.0067562039695288 0.26869008063052024 0.06713967050648662 198.35272122023324 733018.299816623 0.012009837769913953 0.01783643722885308 2.9536620412897357e-08 7.5296391982588675 -0.08729909125287394 AALEQPCEGS(ph)LTRPK ddPTM_A549_MK2206_60min_R1 3 AALEQPCEGSLTRPK 15 1 D6RGY3;D6R960;Q6PUV4 D6RGY3 CPLX2 Complexin-2 1 AALEQPCEGS(0.998)LT(0.002)RPK;AALEQPCEGS(0.998)LT(0.002)RPK;AALEQPCEGS(0.995)LT(0.005)RPK 219.66 9.003499999999998e-47 366196600.0 16860.6 15800.9 14027.900000000001 13840.199999999999 18202.399999999998 15779.4 17005.9 14460.699999999999 22247.0 22251.3 22191.5 True False 19706.257077907158 16605.09831889935 16017.267155951447 17231.049621310176 15524.851072573478 17449.165634481997 20095.651902064896 16510.548509036413 17208.09002115886 17224.715875800983 16680.738095757653 1.181378004065598 0.9954654418513086 0.9602253248029268 1.0329908378390331 0.9307052831506211 1.0460667588156531 1.2047219845251178 0.9897972388425351 1.0316144239166087 1.0326111336872843 1.0 14.025895506673155 -10.705610047584502 0.004627905080319177 1.172903114436772e-05 2.0313974978374456 0.011498688776459876 0.08023456419804408 56637.0612712977 60.16090911911803 13499.206920495175 12911.071807946677 1.969654045602553e-11 10.705610047584502 2.031385768806301 AALEQPCEGS(ph)LTRPK ddPTM_A549_PD325901_60min_R1 4 AALEQPCEGSLTRPK 15 1 D6RGY3;D6R960;Q6PUV4 D6RGY3 CPLX2 Complexin-2 1 AALEQPCEGS(0.998)LT(0.002)RPK;AALEQPCEGS(1)LTRPK;AALEQPCEGS(0.999)LT(0.001)RPK;AALEQPCEGS(0.999)LT(0.001)RPK 207.56 1.0798e-40 580784500.0 19425.399999999998 20644.0 22669.100000000002 20915.4 20771.4 21693.9 21458.1 22800.4 18556.5 21708.0 25178.1 True False 21397.452307776333 22383.7423301243 24207.561446372256 22207.29675568018 19312.48852143988 21517.23207098963 22274.699737822877 22345.628135432216 17776.634836967016 20337.353175289532 22081.35331712617 0.9690281207167042 1.013694315228569 1.0962897562803369 1.005703610496388 0.8746062002667755 0.9744525963588015 1.0087560946976357 1.0119682346688903 0.8050518725761052 0.9210193271766545 1.0 14.430540973951564 -7.094854893976385 0.7565102994887315 0.9179696575735222 1.0255990549212257 0.1307283755240316 0.07000454778932079 0.9440455424790706 1.024819202203176 0.01657614833286607 0.050616734896026624 8.037946403594318e-08 7.094854893976385 0.10762939734770349 AALEQPCEGSLTRPK ddPTM_A549_PD325901_60min_R1 1 AALEQPCEGSLTRPK 15 1 D6RGY3;D6R960;Q6PUV4 D6RGY3 CPLX2 Complexin-2 0 74.678 0.00072214 2663200.0 2076.2 2234.5 2000.9 2235.8 2460.5 2841.7 2593.8 2508.9 2807.6 2956.6 3285.3 False True 2286.9742955823426 2422.809156978433 2136.6931063891484 2373.9002881297865 2287.6829682641915 2818.5581373626324 2692.50847838182 2458.858021306025 2689.606335692 2769.919771423488 2881.2289272325784 0.7937495955168624 0.8408943607634615 0.7415908837349634 0.8239193580532036 0.7939955574656513 0.9782485906351976 0.9345000159247935 0.8534059886965522 0.9334927572990072 0.9613674724847349 1.0 11.492468578641986 -7.449174013894722 0.2789009824382702 1.0046388967523199 0.7358459032063464 0.6340889580562041 0.050221960356882894 1.1071501182691856 0.17717562615597685 0.03620188743684738 0.10099320674693928 3.5548885211590216e-08 7.449174013894722 -0.2687929935459735 AALHS(ph)PVSEGAPVIPPSSGLPLPTPDAR ddPTM_A549_MK2206_60min_R1 1 AALHSPVSEGAPVIPPSSGLPLPTPDAR 28 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5;Q9NRA0-3 E9PCV4 SPHK2 Sphingosine kinase 2 1 AALHS(0.984)PVS(0.016)EGAPVIPPSSGLPLPTPDAR 57.919 0.00082794 1974800.0 484.28 537.06 625.81 640.37 880.56 545.8 544.53 442.43 1085.5 1116.1 1082.3 True False 566.0146244907579 564.3940600312696 714.5592682344449 797.260678747302 751.0307904707784 603.5561937272818 643.4640524895124 505.14580738504924 839.6359831873035 863.972234834885 813.5350400395881 0.6957470749670654 0.6937550716977171 0.8783386493096512 0.979995500511577 0.9231695667764129 0.7418932977956445 0.7909481716463008 0.6209269208127384 1.0320833668657288 1.0619975690203123 1.0 9.668060675811013 -8.795153104718565 24.99880512539258 1.0151505544875021 0.7994140554774862 0.5231087731972548 0.10180809737894395 118.14900593183744 87607.24756374332 0.018536125231108105 0.01973372115523459 1.6026802875583195e-09 8.795153104718565 -0.2157364990100159 AALHS(ph)PVSEGAPVIPPSSGLPLPTPDAR ddPTM_A549_PD325901_60min_R1 1 AALHSPVSEGAPVIPPSSGLPLPTPDAR 28 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5;Q9NRA0-3 E9PCV4 SPHK2 Sphingosine kinase 2 1 AALHS(0.946)PVS(0.054)EGAPVIPPSSGLPLPTPDAR 56.383 0.0012565999999999999 2505500.0 641.26 760.95 1177.7 1212.9 936.02 842.5 968.04 887.78 834.48 1143.8 1326.3 True False 706.3602431293383 825.0779270542578 1257.6258040854102 1287.8180783042387 870.2771842936995 835.6389593299846 1004.8792919318142 870.0725314500625 799.4097075823688 1071.5802727978707 1163.1735081084128 0.6072698855375775 0.7093334926412002 1.0812022413840894 1.1071590517897254 0.7481920609668716 0.7184129912732671 0.8639117766411124 0.7480161174449376 0.6872660888592559 0.9212557415793508 1.0 10.183850601264135 -11.056627055235586 1.3899398061768968 0.9991000679942118 0.8016794901619338 0.1250596675159905 0.15144566099615947 0.6254236632341645 2.1713539790353145 0.11338133932823416 0.0257058221786703 8.777542577017056e-12 11.056627055235586 -0.19742057783227795 AALKEWNGVVSES(ph)DSPVK ddPTM_A549_PD325901_60min_R1 1 AALKEWNGVVSESDSPVK 18 1 P18858;P18858-2;M0R0Q7;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 AALKEWNGVVS(0.001)ES(0.601)DS(0.399)PVK 173.8 5.498799999999999e-31 12238000.0 5935.0 5416.1 6084.8 6559.4 5653.1 6540.7 6504.3 5592.5 7881.2 6421.1 7528.9 True False 6537.516830883925 5872.533754804602 6497.751118874846 6964.559240521746 5256.045758136274 6487.4347077621715 6751.824695789528 5480.953200268624 7549.980571611267 6015.670650168216 6602.893029629363 0.9900988553877712 0.8893879892423825 0.9840763873831198 1.054773901268651 0.7960216430208183 0.9825139796526928 1.0225555170274392 0.8300835975494039 1.1434352393310037 0.9110658953846312 1.0 12.688882558376864 -8.7733334706067 24.999970009439185 1.0677333011384584 0.9459288251562011 0.0464046032889156 0.09362209480535191 200.97705071010193 422428.63373858895 0.014790886251460442 0.015806021129948084 1.685258512068079e-09 8.7733334706067 -0.1218044759822573 AALKEWNGVVSESDS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 AALKEWNGVVSESDSPVK 18 1 P18858;P18858-2;M0R0Q7;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 AALKEWNGVVSES(0.002)DS(0.998)PVK;AALKEWNGVVSES(0.042)DS(0.958)PVK 151.42 7.269e-18 12773700.0 5944.0 6998.299999999999 5934.4 6155.0 10150.3 7297.299999999999 7488.1 6910.9 11043.3 11319.5 11494.9 True False 6947.201883152441 7354.483577843877 6775.987154904027 7662.975276308447 8657.204316021105 8069.495442444297 8848.590842463629 7890.541238743611 8542.010182526341 8762.417088265825 8640.399086899255 0.8040371530622846 0.8511740608133358 0.7842215488839993 0.886877469343656 1.0019449598279935 0.9339262412866353 1.0240951550351463 0.9132149058609349 0.9886129213033582 1.0141218015671958 1.0 13.076882234480632 -6.579855152232501 3.4208536205951035 0.9862674881880089 0.8177477671321632 0.8197710164681807 0.035022003029103216 0.06428214041067853 1.5342047985738567 0.004614197578957609 0.010411175343572329 2.6311453965227665e-07 6.579855152232501 -0.16851972105584567 AALKEWNGVVSESDS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 AALKEWNGVVSESDSPVK 18 1 P18858;P18858-2;M0R0Q7;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 AALKEWNGVVS(0.012)ES(0.057)DS(0.931)PVK 145.81 2.3046e-17 11486000.0 5297.5 5209.2 4649.0 5217.6 5978.8 6538.3 5875.8 6313.8 6429.9 6186.3 7284.6 True False 5835.298300186617 5648.197565688993 4964.509096708053 5539.879301970645 5558.86971374027 6485.054252566455 6099.4067843611365 6187.866305919716 6159.673663579566 5795.695962239435 6388.640380884068 0.9133865662006665 0.8841000946914136 0.7770838239013632 0.8671452721845067 0.8701178000836269 1.0150914538828755 0.9547268934735521 0.9685732702117491 0.9641603371525481 0.907187698274765 1.0 12.641293216700648 -7.200757179334768 6.39931158183386 0.9810730270682062 0.8583156837957381 0.6139840405799031 0.04111070614518937 0.09169233826995139 7.749030051648121 0.005200516628331663 0.009032743024922388 6.298582477735063e-08 7.200757179334768 -0.12275734327246812 AALKEWNGVVSESDS(ph)PVKRPGR ddPTM_A549_MK2206_60min_R1 4 AALKEWNGVVSESDSPVKRPGR 22 3 P18858;P18858-2;M0R0Q7;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 AALKEWNGVVS(0.069)ES(0.324)DS(0.607)PVKRPGR;AALKEWNGVVS(0.003)ES(0.051)DS(0.945)PVKRPGR;AALKEWNGVVS(0.007)ES(0.042)DS(0.951)PVKRPGR;AALKEWNGVVS(0.052)ES(0.098)DS(0.851)PVKRPGR 97.441 8.872999999999999e-08 79474000.0 9024.7 8508.7 8082.2 8207.6 13286.2 11411.0 10217.5 9088.300000000001 15411.400000000001 13184.8 13291.400000000001 True False 10547.848727268814 8941.756486403867 9228.377491130583 10218.46236845316 11331.817580122723 12618.504445991228 12073.887492537768 10376.594356751448 11920.742506948693 10206.344522758716 9990.7785560216 1.0557584344526842 0.8950009687697992 0.9236895242331734 1.0227893963573371 1.1342276797129947 1.2630151269228018 1.2085031636759325 1.0386171906990482 1.193174529903265 1.0215764933161482 1.0 13.286381392624273 -6.559457218339859 3.8707800600213615 1.113601534925001 0.9534161326896848 0.42148075270698004 0.0853194112536795 0.19247541845027763 6.197577342616289 0.014207385612748941 0.03177468095834366 2.7576730929663657e-07 6.559457218339859 -0.1601854022353162 AALKEWNGVVSESDS(ph)PVKRPGR ddPTM_A549_PD325901_60min_R1 4 AALKEWNGVVSESDSPVKRPGR 22 3 P18858;P18858-2;M0R0Q7;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 AALKEWNGVVSES(0.123)DS(0.877)PVKRPGR;AALKEWNGVVS(0.018)ES(0.067)DS(0.916)PVKRPGR;AALKEWNGVVS(0.006)ES(0.053)DS(0.941)PVKRPGR;AALKEWNGVVS(0.006)ES(0.025)DS(0.969)PVKRPGR 122.22 4.8039e-16 113779000.0 12546.599999999999 12830.5 13660.8 13855.0 14972.0 17403.1 13368.8 13470.8 18610.2 15596.9 17933.4 True False 13820.32159568125 13911.771263643663 14587.90403706376 14710.791883011983 13920.418370596008 17261.374923579406 13877.556999688064 13202.114326361834 17828.078012713795 14612.10907221639 15727.705489189028 0.8787245924194802 0.8845391511944569 0.927529069455888 0.935342532521603 0.8850889521147685 1.097513870376362 0.8823637376238558 0.8394176973517692 1.1335460232879189 0.9290680755855022 1.0 13.94102059125509 -8.763930501284614 24.999975956677893 1.063063399233523 0.9201312043856138 0.2062291778499098 0.08022730346620717 46.24695971381647 464116.57317650254 0.013288218707317648 0.014472332007760356 1.7221441419907305e-09 8.763930501284614 -0.1429321948479092 AALLKAS(ph)PK ddPTM_A549_MK2206_60min_R1 6 AALLKASPK 9 1 P50914 P50914 RPL14 60S ribosomal protein L14 1 AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK 92.19 0.00084063 7269370000.0 42614.200000000004 61927.799999999996 48259.0 60163.4 67574.29999999999 49534.4 46611.0 45579.100000000006 90721.7 71079.1 70379.3 True False 49806.435142838985 65079.66050497978 55102.85186514451 74903.43570083764 57634.20998513389 54776.09732972644 55079.61535744342 52040.077005139574 70173.37980278546 55022.2819434211 52902.17744013504 0.9414817603528843 1.2301886926795211 1.0415989384841444 1.415885684206469 1.0894487292201478 1.0354223584031481 1.0411597031099977 0.9837038761595204 1.3264743191751378 1.0400759402707989 1.0 15.691039484070878 -11.286283743083246 1.8348955944152983 0.9995377046173265 1.157759951166545 0.02573770961228805 0.1431091500020915 0.6077294670881205 3.6933327771529734 0.11255021692940864 0.02236504003494282 5.172687678083302e-12 11.286283743083246 0.15822224654921857 AALLKAS(ph)PK ddPTM_A549_PD325901_60min_R1 6 AALLKASPK 9 1 P50914 P50914 RPL14 60S ribosomal protein L14 1 AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK 108.72 0.00035949 13018692000.0 37258.7 53521.3 39473.8 64791.200000000004 52511.799999999996 50862.8 46358.5 48192.899999999994 70904.3 52946.0 49697.99999999999 True False 41041.17579559476 58031.72778401871 42152.72944324252 68793.20527250852 48823.55232387544 50448.59022030761 48122.69808584455 47231.65480290131 67924.43884734513 49602.98052417914 43585.46106157872 0.9416253676337318 1.3314469176322332 0.967128221580311 1.5783521292872325 1.1201797832285452 1.1574637273891053 1.1040997826742158 1.0836561929715771 1.5584196471245226 1.1380625400313813 1.0 15.411559350506655 AALLKAS(ph)PKK ddPTM_A549_MK2206_60min_R1 1 AALLKASPKK 10 2 P50914 P50914 RPL14 60S ribosomal protein L14 1 AALLKAS(1)PKK 45.997 0.0082265 10804000.0 3439.1 4241.9 4593.8 4453.5 6490.0 4974.4 4740.9 3761.8 6842.5 6409.2 6945.9 True False 4019.5360020776516 4457.794591380185 5245.2699164529095 5544.607699925215 5535.329597251013 5500.787706260519 5602.260162796412 4295.046670029335 5292.684675227198 4961.357268617282 5221.041332912293 0.7698724728991099 0.8538133117773329 1.0046405653576969 1.061973531022103 1.0601964712206962 1.0535805705242682 1.0730158613150598 0.8226417674486328 1.0137220408241707 0.9502620171462692 1.0 12.35012186463725 -5.638153248364138 3.0290332660612886 1.0095084621840704 0.7810002186026079 0.5588494746593378 0.06757296307651937 0.12947517226002342 2.24304904158959 0.00888663853384402 0.04688366327819791 2.3006298568865563e-06 5.638153248364138 -0.2285082435814625 AALLKAS(ph)PKK ddPTM_A549_PD325901_60min_R1 1 AALLKASPKK 10 2 P50914 P50914 RPL14 60S ribosomal protein L14 1 AALLKAS(1)PKK 40.475 0.020332 10387000.0 4932.6 5293.8 5591.0 5743.5 5835.0 7248.4 7270.2 6642.4 6370.8 6523.3 7175.3 True False 5433.353920811802 5739.92710459272 5970.438881414222 6098.262950565089 5425.169729657205 7189.371433599361 7546.871439406089 6509.9121211380025 6103.057431053777 6111.417724726661 6292.783587974288 0.8634261523302845 0.912144367329254 0.9487754978295969 0.9690883001632324 0.8621255846180502 1.1424787350606624 1.1992898427062395 1.0345043699863847 0.9698502015414794 0.9711787540899669 1.0 12.619482613409511 -7.230854085123001 24.975807543964844 1.0170816193813779 0.9164826639212592 0.42540954785512264 0.07595225386247578 774.2077625585407 632214.7143376177 0.012627850739018112 0.021870325237714948 5.876867711996866e-08 7.230854085123001 -0.10059895546011866 AALLKASPK ddPTM_A549_PD325901_60min_R1 1 AALLKASPK 9 1 P50914 P50914 RPL14 60S ribosomal protein L14 0 100.48 0.0003768 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AALPSLTNPPS(ph)LSPIR ddPTM_A549_MK2206_60min_R1 2 AALPSLTNPPSLSPIR 16 0 P42858 P42858 HTT Huntingtin 1 AALPS(0.002)LT(0.012)NPPS(0.493)LS(0.493)PIR;AALPSLT(0.005)NPPS(0.497)LS(0.497)PIR 71.344 0.0011524 1951820.0 1439.62 2199.6 1312.02 1905.33 2747.51 1927.98 2088.85 2199.92 2679.31 2585.46 3639.41 True False 1682.592660670242 2311.55024474878 1498.0841646968831 2372.135935533513 2343.354918604488 2131.9975639104528 2468.3670064876455 2511.7653969724424 2072.450562978879 2001.402790320046 2735.64405439386 0.6150627154756272 0.8449747842874804 0.5476166251565997 0.8671215583487559 0.8566008120978691 0.7793402655897943 0.9022983097976774 0.9181623584903765 0.757573179028978 0.731602047095816 1.0 11.417664812266201 -14.999999999999998 0.05057613155515945 1.7857770347349025 0.3783155861206264 0.11798572892695769 0.11977818639240276 283.5301693970795 1.0936117349136496 31.17853354554125 7.199715808607342 1.000000000000004e-15 14.999999999999998 -1.407461448614276 AALPSLTNPPSLS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 AALPSLTNPPSLSPIR 16 0 P42858 P42858 HTT Huntingtin 1 AALPSLTNPPS(0.033)LS(0.967)PIR;AALPSLT(0.001)NPPS(0.453)LS(0.547)PIR 128.06 5.680800000000001e-10 5017600.0 1837.8600000000001 1777.53 1655.88 2235.52 2331.8 2440.0 2134.8199999999997 2134.1 2393.3999999999996 2263.48 2452.7 True False 2024.4381942389778 1927.328691342077 1768.257974415344 2373.6029931657126 2168.022412273293 2420.1294489794213 2216.0617433183284 2091.533701330938 2292.8137212727 2120.563486512088 2151.033448946319 0.9411467753933098 0.8960012650134179 0.8220504312852611 1.103470982437962 1.0078980470226049 1.1251007975561322 1.0302311869691583 0.9723389947076245 1.0659126302270343 0.9858347333235767 1.0 11.070814243757685 -6.261031682031911 24.999999980086677 1.0364127929421112 0.8873596669695254 0.6260079836675367 0.0516160894166758 17.184066166326375 1053680.2949765131 0.00690381575450133 0.017146595826663356 5.482369692602068e-07 6.261031682031911 -0.1490531259725858 AALQELLSK ddPTM_A549_MK2206_60min_R1 2 AALQELLSK 9 0 P62851 P62851 RPS25 40S ribosomal protein S25 0 ; 139.96 0.00011524 8038300.0 2260.5 2482.0 2199.92 2423.3 2536.7 2455.0 2545.8 2418.1 3670.7 3413.0 3415.4 False True 2642.0171360811064 2608.3231985208563 2511.901735949122 3017.0086087860695 2163.554790346171 2714.786470502891 3008.3389066310406 2760.8730801206693 2839.292310903393 2642.000929568553 2567.2619197553427 1.0291186558529595 1.0159941914962174 0.9784360982491821 1.1751853543146027 0.842747977406355 1.0574637708806927 1.1718083314684666 1.0754154295186904 1.1059612924784763 1.0291123430913247 1.0 11.326014776156157 -7.48883591025384 24.963106839516083 1.064210082906217 1.009713727881051 0.12786239267426736 0.0828216040271867 1239.8445968464541 909160.8878493158 0.012492880540720239 0.01996417360639512 3.2446218593630906e-08 7.48883591025384 -0.05449635502516603 AALQELLSK ddPTM_A549_PD325901_60min_R1 2 AALQELLSK 9 0 P62851 P62851 RPS25 40S ribosomal protein S25 0 ; 152.28 5.3052e-05 15593900.0 8113.9 7681.9 7455.9 8410.7 9280.0 8610.2 8038.299999999999 9172.2 9266.0 8927.7 9388.400000000001 False True 8937.617154862523 8329.280672630395 7961.902209968934 8930.20983691439 8628.204814262015 8540.081385902708 8344.201905226535 8989.253275548295 8876.582243382985 8364.00349838919 8233.686317971062 1.0854940071441685 1.0116101526057273 0.966991199627204 1.0845943714692017 1.0479151720208075 1.0372123804695959 1.0134223703682104 1.091765331881555 1.0780811778083799 1.0158273190628715 1.0 13.0073227714403 -6.281804137441962 24.97602976804988 1.0432233069259707 1.0203896012382814 0.07325663180281172 0.03815644006435156 1883.94563664317 2310528.5631469907 0.005931271988222282 0.013793635814621032 5.226318376978599e-07 6.281804137441962 -0.022833705687689276 AALS(ph)EEELEKK ddPTM_A549_MK2206_60min_R1 1 AALSEEELEKK 11 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AALS(1)EEELEKK 61.657 0.0032093000000000004 4210300.0 2420.2 2354.7 2314.1 2380.8 2825.6 2896.9 1993.8 2388.3 3368.4 3510.0 3611.3 True False 2828.670591790974 2474.5441722631194 2642.2741768609144 2964.096106878174 2409.9579830496864 3203.448035193409 2356.047651834773 2726.848838861998 2605.4627782294906 2717.0885621991283 2714.514543190395 1.0420539462155212 0.911597316164961 0.9733873717822944 1.091943351091589 0.8878044102196039 1.180118206855641 0.8679443835529014 1.0045438311253645 0.9598264208108699 1.0009482428507117 1.0 11.406478497883661 AALS(ph)EEELEKK ddPTM_A549_PD325901_60min_R1 2 AALSEEELEKK 11 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AALS(1)EEELEKK;AALS(1)EEELEKK 78.814 0.00042622 8480200.0 4035.3 4086.1 3986.9 4180.6 4843.7 4345.2 4175.6 4620.2 4211.8 4354.5 5175.4 True False 4444.960685369148 4430.449987169199 4257.475009177314 4438.826167168523 4503.495221857856 4309.814131846467 4334.504742975996 4528.046486523214 4034.7926929290384 4079.5561268563783 4538.858609563659 0.9793124368323213 0.9761154440532611 0.9380056475446377 0.9779608815783859 0.9922087487741323 0.9495369877275794 0.9549768159428723 0.997617876217236 0.8889443448243745 0.8988066114816836 1.0 12.148113832101044 AALS(ph)LPAK ddPTM_A549_MK2206_60min_R1 1 AALSLPAK 8 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AALS(1)LPAK 68.735 0.0073985 984820.0 728.62 534.75 685.15 605.49 690.1 658.69 622.69 471.53 782.36 793.74 858.64 True False 851.593242951301 561.9664908980776 782.3145725233373 753.8350771814789 588.5872041699423 728.3921385969649 735.8247127700854 538.370821500062 605.1567091721963 614.4335827236283 645.415990741561 1.319448627191355 0.8707043193218644 1.2121090641471162 1.167983266598877 0.9119501416345072 1.1285622746347934 1.140078218273842 0.8341454646661175 0.9376227392148928 0.9519962187761494 1.0 9.334085512064657 -8.23697616172032 24.64907171098023 0.9594911323103905 1.0978391117719057 0.30210059309098103 0.12571558985962394 716.3315913541873 721774.6748433514 0.018657023542022894 0.024079423924717284 5.7946050194821984e-09 8.23697616172032 0.13834797946151522 AALS(ph)LPAK ddPTM_A549_PD325901_60min_R1 2 AALSLPAK 8 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AALS(1)LPAK;AALS(1)LPAK 80.23899999999999 0.004188399999999999 2620100.0 924.33 1053.6 1160.5 1104.1 1374.6 1270.9 1385.3 1572.3 817.83 1076.7 1194.7 True False 1018.1673011442181 1142.390569609522 1239.2585086534084 1172.2977494069664 1278.0528381125612 1260.550211765552 1438.0183495652464 1540.9392430545104 783.4594491804351 1008.7169782492279 1047.7594738272794 0.9717567118959408 1.0903175758808192 1.182770034163105 1.1188615122942012 1.2197960219286408 1.2030912086730992 1.372469908873666 1.4706994129346622 0.7477474255790756 0.9627371581423776 1.0 10.033091851019039 -8.77698176085888 24.99999615092278 0.8808807259673859 1.2025531460037449 0.4781497426038265 0.13913560036645223 151.97981549671582 244459.4300366239 0.027406557193950135 0.029226121723382556 1.6711607968684893e-09 8.77698176085888 0.321672420036359 AALS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AALSPK 6 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 AALS(1)PK;AALS(1)PK 81.548 0.042204000000000005 67025000.0 20334.0 19256.9 18518.5 18799.0 22472.0 19646.6 20497.6 20119.8 19880.2 20625.7 22589.0 True False 22398.292710900365 20879.74654509642 19775.276770786866 19960.17153437331 20893.644244191368 19486.604603409476 21277.6473847171 19718.494805322236 19044.70432925777 19323.389781996022 19810.696203468997 1.130616131853976 1.053963289863595 0.998212105606065 1.0075451831358726 1.0546648148858464 0.9836405749333146 1.0740484416186862 0.9953458779439253 0.9613344293232311 0.9754018527936619 1.0 14.27399196102082 -2.0000000000000004 0.4517573673676269 0.9889912476160865 3.9681123189905096 0.5412680799962547 0.032854032421394695 42.25590183649906 0.44866253119129523 0.006951842402592698 117.34025601585324 0.00999999999999999 2.0000000000000004 2.979121071374423 AALSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AALSSPR 7 0 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 AALS(0.032)S(0.968)PR;AALS(0.058)S(0.942)PR 79.116 0.016467 475350000.0 7615.6 7506.1 7094.700000000001 8026.8 8857.400000000001 8401.9 8233.1 8327.1 8771.6 8672.0 9627.2 True False 8388.73010569159 8138.665389660246 7576.189005896893 8522.597205814547 8235.286780371167 8333.477712041062 8546.415125825191 8161.009458016425 8402.960156060673 8124.448440027217 8443.11543184899 0.9935586186643559 0.9639410304589343 0.89732150022705 1.0094137969102894 0.9753848383152676 0.987014542120986 1.0122347840450618 0.966587455056174 0.9952440214619306 0.9622571793085166 1.0 13.043559723018767 -6.336305371967664 24.999988264531932 0.9947771570175332 0.9528357284466841 0.2563857829549989 0.026455042738467684 93.41432467190344 31193.418502544944 0.003222881443251478 0.007489301553039652 4.609933154557694e-07 6.336305371967664 -0.04194142857084915 AALTGLLHR ddPTM_A549_PD325901_60min_R1 2 AALTGLLHR 9 0 P55084-2;P55084;C9JEY0;C9JE81;B5MD38 P55084-2 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase 0 ; 111.95 0.00032164 3143600.0 175.67 107.68 279.82 205.21 165.07 124.0 219.413 206.19 287.04200000000003 0.0 171.04 False True 193.50388907858104 116.75457150299286 298.81026789435305 217.88535563427553 153.47605266058522 122.99018511206894 227.76288178240057 202.07737869707418 274.97862295544354 0.0 150.00316431189245 1.289998714135391 0.7783473904605918 1.9920264300095367 1.4525383956650393 1.0231521005881703 0.8199172709206516 1.5183871808785785 1.34715410587544 1.8331521486019937 0.0 1.0 7.228849124422041 AAMYDIIS(ph)SPSKDSTK ddPTM_A549_PD325901_60min_R1 1 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.893)S(0.106)PSKDSTK 127.97 1.3024e-10 56075000.0 13156.0 13183.0 13269.0 12514.0 14177.0 13640.0 12795.0 14057.0 15205.0 14728.0 15744.0 True False 14491.58743506469 14293.977675742524 14169.514132978964 13286.961358643941 13181.25642799489 13528.920362327588 13281.920726692653 13776.622107496829 14565.986726811814 13798.07156650379 13807.587809438928 1.0495379522524693 1.0352262736269617 1.0262121326719083 0.9622941778114867 0.9546386095755353 0.9798178037353605 0.9619291153530143 0.9977573416610155 1.054926242573264 0.9993107961313392 1.0 13.753173681815515 -11.655510757403771 3.5929425064623053 0.9995343655832345 1.0132215948713654 0.0 0.03532135980199715 1.3912829702004479 33.18378581417215 0.04079750920803966 0.005933298659893277 2.2104935020562997e-12 11.655510757403771 0.013687229288130931 AAMYDIISS(ph)PSKDSTK ddPTM_A549_MK2206_60min_R1 6 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.164)S(0.836)PSKDSTK;AAMYDIIS(0.372)S(0.618)PS(0.008)KDS(0.001)T(0.001)K;AAMYDIIS(0.144)S(0.855)PSKDSTK;AAMYDIIS(0.169)S(0.828)PS(0.003)KDSTK;AAMYDIIS(0.121)S(0.878)PS(0.001)KDSTK;AAMYDIIS(0.002)S(0.996)PS(0.001)KDSTK 195.27 1.0626e-39 141511000.0 42748.0 44922.8 44969.8 40335.899999999994 58601.0 45847.0 43432.100000000006 45075.9 63774.9 61694.8 65835.6 True False 49962.81731174303 47209.17863920739 51347.19384581476 50218.197310747375 49980.870528275314 50698.499109224475 51323.15037579151 51465.54686415421 49329.98697758819 47757.90183110052 49486.80354987548 1.0096190040116007 0.9539751055375283 1.0375936646234238 1.0147795716919714 1.0099838127128555 1.0244852258062653 1.0371078084294787 1.0399852722814162 0.9968311436375307 0.9650633786231013 1.0 15.594756238249154 -4.842064553445659 21.810001068774955 1.0064275987929627 9.892324309722937 0.0 0.027040147107452776 38387.12500898275 5703493.6186800115 0.003288024098747272 1299985.2532475428 1.4385847314139926e-05 4.842064553445659 8.885896710929975 AAMYDIISS(ph)PSKDSTK ddPTM_A549_PD325901_60min_R1 4 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.245)S(0.753)PS(0.002)KDSTK;AAMYDIIS(0.287)S(0.712)PS(0.001)KDSTK;AAMYDIIS(0.179)S(0.744)PS(0.033)KDS(0.033)T(0.011)K;AAMYDIIS(0.026)S(0.973)PS(0.001)KDSTK 153.21 5.725399999999999e-16 168301000.0 42322.1 42680.700000000004 42440.600000000006 39175.4 48860.7 48688.0 45948.5 47597.2 43797.8 48543.4 52429.3 True False 46618.608436116665 46277.552376929656 45320.87433206021 41595.1754842113 45428.89299226421 48291.50107045494 47697.09531148398 46647.836506718944 41957.13077695224 45478.36143953155 45980.828476715964 1.0138705625916171 1.006453209088304 0.9856471889150508 0.904619965803237 0.9879963997444883 1.0502529569450683 1.037325704899752 1.0145062203553106 0.9124918399023352 0.9890722491562141 1.0 15.488744840135375 -10.107721979311185 0.003300769679865395 5.715103871446267e-05 1.9439493140808448 0.0 0.04530785844966958 85047.816007892 86.96486314687618 25898.099235843227 25317.192662325593 7.803294913010742e-11 10.107721979311185 1.9438921630421304 AANMLQQS(ph)GSK ddPTM_A549_PD325901_60min_R1 1 AANMLQQSGSK 11 0 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 1 AANMLQQS(0.94)GS(0.06)K 44.299 0.030655 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AANQVEETLHTHLPQT(ph)PETNFR ddPTM_A549_MK2206_60min_R1 2 AANQVEETLHTHLPQTPETNFR 22 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 AANQVEETLHTHLPQT(0.997)PET(0.003)NFR;AANQVEETLHTHLPQT(0.996)PET(0.004)NFR 149.73 1.5995999999999998e-27 15484200.0 874.29 964.29 963.49 1151.32 1103.73 1443.04 1062.91 1203.21 1590.13 1715.71 1814.73 True False 1021.8487776617347 1013.3682421843979 1100.127369890551 1433.3934516847187 941.3727791022895 1595.7415349875735 1256.026988470107 1373.7687021760855 1229.9680939158238 1328.1299193876553 1364.0824569999463 0.7491107098533524 0.7428936843107848 0.806496237998752 1.0508114405614521 0.6901142773822262 1.169827767228324 0.9207852370101673 1.007100923500946 0.9016816304645667 0.9736434279117099 1.0 10.413715140687911 -6.080847340349173 5.176787488342996 0.9557986956849656 0.7515923514563959 0.3928620920370651 0.11068770381861777 0.15383799417748226 7.104479046670046 0.014011098396629682 0.0387812177023546 8.301425211559878e-07 6.080847340349173 -0.20420634422856965 AANRT(ph)PPKSPGDPS(ph)KDR ddPTM_A549_PD325901_60min_R1 1 AANRTPPKSPGDPSKDR 17 3 O94811 O94811 TPPP Tubulin polymerization-promoting protein 2 AANRT(0.98)PPKS(0.097)PGDPS(0.923)KDR 57.293 0.042035 51552000.0 2359.8 2547.8 2338.5 2361.8 2715.4 2671.1 2470.6 2878.5 2631.8 2988.1 2935.0 True False 2599.3651588070556 2762.5120475048775 2497.204672542867 2507.6830219630224 2524.6796716214526 2649.3474472003827 2564.6200349641945 2821.0860593604352 2521.1945983310306 2799.4308560476634 2574.0136064979188 1.0098490358579064 1.0732313304526082 0.9701598570570283 0.9742306783587121 0.9808338484490035 1.029267071670596 0.9963506131008745 1.0959872365238472 0.979479903278852 1.0875742260960448 1.0 11.329803964473689 AANRT(ph)PPKSPGDPSK ddPTM_A549_MK2206_60min_R1 2 AANRTPPKSPGDPSK 15 2 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 AANRT(1)PPKSPGDPSK;AANRT(0.976)PPKS(0.022)PGDPS(0.002)K 76.768 0.00020667 19374700.0 3298.4 3185.0 3392.3 2685.5 3481.4 3114.6 2452.1000000000004 2835.2 4145.8 4330.6 4558.6 True False 3855.089281862385 3347.1028957650815 3873.3791496328085 3343.447620556676 2969.290671782693 3444.184904695844 2897.6148295034864 3237.098282435848 3206.7829194821943 3352.314452267679 3426.573809040436 1.1250565423956091 0.9768074707552822 1.1303941970879343 0.9757407272931213 0.8665479972877634 1.0051395640767884 0.8456303558553501 0.944704087183329 0.9358569516353739 0.9783283942179105 1.0 11.742551047916884 -6.422237890249249 6.771416150433675 0.9532009443715824 1.066531099579403 0.4855826576551512 0.06072130572209987 0.18454378739028496 10.717282009933342 0.008331945627039103 0.019459747146857387 3.7823534480931587e-07 6.422237890249249 0.11333015520782064 AANRT(ph)PPKSPGDPSK ddPTM_A549_PD325901_60min_R1 2 AANRTPPKSPGDPSK 15 2 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 AANRT(0.998)PPKS(0.002)PGDPSK;AANRT(0.996)PPKS(0.004)PGDPSK 50.87 0.007781999999999999 36401000.0 5611.6 5251.799999999999 5885.1 4931.9 6188.9 5545.1 5448.4 5854.3 5962.3 5686.9 5937.0 True False 6181.285500958419 5694.387617193701 6284.498275981196 5236.532261842421 5754.213014545926 5499.942544072046 5655.741843478876 5737.531393890497 5711.725265456764 5327.828163467575 5206.78663774383 1.1871593616205585 1.0936471980463471 1.2069821010957253 1.0057128563484752 1.1051370864390369 1.0563026539637976 1.086225005357543 1.1019332638482466 1.096977015353894 1.023246876460487 1.0 12.346177574244942 -14.999999999999998 0.08822347595542203 0.6754828911646447 1.191976387810827 0.4070022437246672 0.04887084810664429 95.88912681651105 0.6188219234766474 6.015039736641519 0.497630048957729 1.000000000000004e-15 14.999999999999998 0.5164934966461823 AANRT(ph)PPKSPGDPSKDR ddPTM_A549_MK2206_60min_R1 3 AANRTPPKSPGDPSKDR 17 3 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 AANRT(0.994)PPKS(0.005)PGDPS(0.001)KDR;AANRT(0.997)PPKS(0.001)PGDPS(0.002)KDR;AANRT(0.973)PPKS(0.026)PGDPSKDR 49.528 0.0049485 42124000.0 4691.1 4637.299999999999 4569.1 4502.0 6124.2 4895.1 4526.3 4740.9 7593.8 7974.4 6592.099999999999 True False 5482.842993616495 4873.318762490236 5217.067085041789 5604.99020210246 5223.338292678686 5413.096232895603 5348.670120623801 5412.937093397331 5873.816424806767 6172.977501538668 4955.099637295545 1.106505094740938 0.9834956144595419 1.0528682502717996 1.1311559024798177 1.0541338570397636 1.0924293413098811 1.0794273601212718 1.0923972250034655 1.1854083378256044 1.2457827194990232 1.0 12.274698352121668 -6.017119741523716 23.349528839316985 1.0894550562900303 1.0382957602474212 0.0880269418596562 0.0690242065692934 568.898919395223 775926.6345064548 0.009542859292264724 0.025996217080246714 9.613471839555736e-07 6.017119741523716 -0.05115929604260905 AANRT(ph)PPKSPGDPSKDR ddPTM_A549_PD325901_60min_R1 3 AANRTPPKSPGDPSKDR 17 3 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 AANRT(0.993)PPKS(0.006)PGDPSKDR;AANRT(0.974)PPKS(0.022)PGDPS(0.004)KDR;AANRT(0.971)PPKS(0.029)PGDPSKDR 69.03 0.0003803 134214000.0 9113.4 9468.6 9815.0 9559.8 11866.8 10462.0 10614.9 10239.3 11393.0 11259.3 11449.8 True False 10038.58565906951 10266.552152054597 10481.104922389663 10150.287134118946 11033.316906237551 10376.800940665042 11018.855828196152 10035.069128924546 10914.19183022473 10548.385876475839 10041.547186262307 0.9997050726209952 1.0224074001365164 1.0437739053528232 1.0108290033238507 1.098766624463217 1.0333866632486068 1.0973264999711285 0.9993548745808192 1.086903405199975 1.0504741630758785 1.0 13.293693954214476 -5.301130304557583 1.2211294729650182 1.0448301588241697 0.9807352689801179 0.1544192822244862 0.03411809571050256 2.4779688400290074 3.1962067396713976 0.0056280030433161965 0.19614590149240235 4.998845284541797e-06 5.301130304557583 -0.06409488984405187 AAPALT(ph)PPDR ddPTM_A549_MK2206_60min_R1 2 AAPALTPPDR 10 0 P05129-2;P05129 P05129-2 PRKCG Protein kinase C gamma type 1 AAPALT(1)PPDR;AAPALT(1)PPDR 90.685 0.00069598 16187000.0 2196.13 2388.5 2809.3 2181.07 3810.8 2135.07 2697.0 2419.9 3769.2 3539.3 3342.1 True False 2566.7830537765094 2510.064447891646 3207.7009831275095 2715.432247911953 3250.2363681362335 2361.0016902552375 3187.0099894665404 2762.9282356329372 2915.4822181755712 2739.7696718493944 2512.164332732428 1.0217416991127621 0.9991641132654335 1.2768674968164049 1.0809134627583994 1.2937992653534014 0.939827725237714 1.2686311750951804 1.0998198643429342 1.1605459802880262 1.0906012939326324 1.0 11.29471512558893 -10.814937490251141 0.985594701877853 0.9975590596232525 1.130698832893626 0.04957976949288734 0.11450941314810384 0.8099522574201371 1.3542946557323694 0.07769520352401983 0.017900765888668655 1.5313078531095975e-11 10.814937490251141 0.13313977327037352 AAPALT(ph)PPDR ddPTM_A549_PD325901_60min_R1 2 AAPALTPPDR 10 0 P05129-2;P05129 P05129-2 PRKCG Protein kinase C gamma type 1 AAPALT(1)PPDR;AAPALT(1)PPDR 94.66 0.00060783 21109900.0 4390.1 4413.8 4112.0 4615.1 5608.9 4620.1 4232.8 4704.9 4985.3 4759.2 5663.3 True False 4835.779720179191 4785.766416232446 4391.06504746473 4900.164245347424 5214.950213654547 4582.475437389276 4393.881520277034 4611.05707857735 4775.7851778477425 4458.703299789845 4966.750002616581 0.9736305869294021 0.9635609631471709 0.8840922223086387 0.9865936966358125 1.0499723583645664 0.9226305803543843 0.8846592878566973 0.9283851766543827 0.9615513515541885 0.897710433873441 1.0 12.278086416365332 -9.967155123812164 1.0213517470244957 0.9948719594059465 0.9501087592993804 0.0 0.05349531724735798 0.7143529745878714 1.5096231927788044 0.01643341978533928 0.009001618358505272 1.0785614066247376e-10 9.967155123812164 -0.04476320010656609 AAPAQVRPPS(ph)PGNIR ddPTM_A549_MK2206_60min_R1 2 AAPAQVRPPSPGNIR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AAPAQVRPPS(1)PGNIR;AAPAQVRPPS(1)PGNIR 54.253 0.0045338999999999996 53065000.0 6194.1 7150.700000000001 5949.4 6034.2 9014.7 6857.9 6757.6 6640.700000000001 9491.6 9281.3 10562.7 True False 7239.512648794505 7514.640086890853 6793.114380457337 7512.57927088553 7688.649571700886 7583.598426094409 7985.36844820878 7582.039561290817 7341.767754970621 7184.6478838572 7939.690074310409 0.911813002905316 0.9464651663425953 0.8555893639270729 0.9462056075958386 0.9683815740589438 0.9551504347294151 1.0057531683819962 0.9549540964858562 0.9246919824648547 0.9049028131593931 1.0 12.954866977548944 -6.508844560502642 21.822121513616903 0.9653262800557605 0.9074885415767665 0.32103231825951395 0.0338319501912207 99.6828631296855 154997.72834868878 0.004775074622710928 0.010680215961169463 3.0985281032421236e-07 6.508844560502642 -0.05783773847899398 AAPAQVRPPS(ph)PGNIR ddPTM_A549_PD325901_60min_R1 4 AAPAQVRPPSPGNIR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AAPAQVRPPS(1)PGNIR;AAPAQVRPPS(1)PGNIR;AAPAQVRPPS(1)PGNIR;AAPAQVRPPS(1)PGNIR 78.848 0.00013457 113395200.0 12076.3 12177.5 11412.900000000001 12279.199999999999 11920.099999999999 11447.2 11188.9 12753.8 11280.1 12485.5 13606.1 True False 13302.277085897815 13203.740661939966 12187.448025342941 13037.658295913434 11082.873298112567 11353.977798507061 11614.699712301006 12499.415453837459 10806.036624604405 11697.163399211237 11932.63595617422 1.1147811040874762 1.1065233792796678 1.021354214618177 1.0926050491943025 0.9287866770441475 0.9515062589864943 0.973355740924225 1.0474982644023405 0.9055867173265362 0.9802665096104651 1.0 13.542625153583055 -6.755386303347907 24.98705806521643 0.9610838834057662 1.0809763673650847 0.6299511012353175 0.0417794039790319 78.4474935035043 323827.1982853251 0.006822078120270923 0.013918266094637257 1.756360642586892e-07 6.755386303347907 0.11989248395931851 AAPAQVRPPS(ph)PGNIRPVK ddPTM_A549_MK2206_60min_R1 8 AAPAQVRPPSPGNIRPVK 18 2 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK 163.78 9.688700000000001e-24 1557412000.0 42445.799999999996 44614.8 43152.3 40302.9 53577.7 44591.0 41110.3 44056.8 59387.9 59989.5 61168.7 True False 49609.613339823685 46885.50275478173 49271.945016272126 50177.11230926593 45696.491303950024 49309.590022889766 48579.50936965749 50301.98631829135 45936.63547298872 46437.83028548281 45978.823619763025 1.0789665640444972 1.0197194939678489 1.071622567461548 1.0913091801613288 0.9938595141505177 1.0724413140856235 1.0565626857137906 1.0940250828137783 0.9990824439719642 1.0099830015120805 1.0 15.488681934347495 -8.785979416595763 24.939324639665028 0.9995666948787157 1.058034463080495 0.43855881115805095 0.028493106760204986 129.9843942500333 132098.76428619263 0.004600956183961068 0.004899145059046452 1.6368941002503297e-09 8.785979416595763 0.058467768201779236 AAPAQVRPPS(ph)PGNIRPVK ddPTM_A549_PD325901_60min_R1 6 AAPAQVRPPSPGNIRPVK 18 2 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK 184.34 2.2164e-40 2402940000.0 36554.3 37870.200000000004 35603.4 35015.9 43588.9 35986.9 36040.200000000004 37758.5 39428.9 40319.4 42571.9 True False 40265.26562614662 41061.65465947847 38019.6608246366 37178.75261612121 40527.366037541535 35693.834617818684 37411.72953295419 37005.377096529795 37771.84045069323 37773.62620304815 37335.82618550897 1.0784618887521669 1.0997923135665224 1.0183157762662032 0.9957929531649489 1.0854819667355127 0.956021019609107 1.0020329896295337 0.991149276104477 1.011678173747056 1.0117260032057118 1.0 15.1882730356076 -5.8214194295498105 5.2291730930879945 1.0061139610289542 1.089236278341153 0.531132106944409 0.029461305548218228 0.09320449354646489 5.0373112992266735 0.003719912075453574 0.012412842994973111 1.5086224646990635e-06 5.8214194295498105 0.08312231731219888 AAPAQVRPPS(ph)PGNIRPVKR ddPTM_A549_MK2206_60min_R1 7 AAPAQVRPPSPGNIRPVKR 19 3 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR 172.0 6.745599999999999e-35 475155000.0 12577.300000000001 15490.599999999999 12873.900000000001 16308.800000000001 22634.499999999996 14267.199999999997 14207.3 11217.22 25501.5 22138.3 23904.399999999998 True False 14700.040754537904 16279.005374297814 14699.6126033835 20304.456732129867 19304.995033740845 15776.945634199112 16788.582507730058 12807.29528629551 19725.450967527435 17137.24265428289 17968.277752122627 0.8181107258764051 0.9059858489985076 0.8180868977076563 1.130016855941091 1.0743931778024918 0.8780443986811898 0.9343456695924455 0.7127725574468349 1.0977930795397033 0.9537498746789149 1.0 14.133164513631279 -2.178566273653905 0.23574766919486584 1.0326723344179711 1.1651193063523636e-14 0.0008182110209794535 0.12397631070927506 58.98947848878846 0.7582596872793057 0.07017311418335569 23.655177884458148 0.006628781842588712 2.178566273653905 -1.0326723344179596 AAPAQVRPPS(ph)PGNIRPVKR ddPTM_A549_PD325901_60min_R1 7 AAPAQVRPPSPGNIRPVKR 19 3 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR;AAPAQVRPPS(1)PGNIRPVKR 180.13 5.7004999999999996e-36 850584700.0 17028.1 21222.8 21697.5 25381.600000000002 29127.7 26381.199999999997 22285.1 23067.699999999997 28174.100000000002 24762.600000000006 29340.000000000004 True False 18756.780176575317 23011.319837423067 23170.022827666813 26949.363786204045 27081.870837109876 26166.36025385899 23133.171675374637 22607.59662723942 26990.040555071944 23199.085209988236 25731.36600158399 0.7289461498243301 0.8942906426346164 0.9004583288054159 1.047335138932969 1.0524847703554778 1.01690521413625 0.8990261797197471 0.878600717344261 1.0489159632415346 0.9015877823416033 1.0 14.651240427037028 -5.309823205081014 1.1650236955148532 1.0065795541922313 0.621061175187281 0.5020791147721608 0.06748036190400565 0.7254296161836103 0.8438604385574244 0.009530018531101553 0.3314829223544313 4.899782417362974e-06 5.309823205081014 -0.38551837900495034 AAPEAS(ph)SPPAS(ph)PLQHLLPGK ddPTM_A549_MK2206_60min_R1 1 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.568)S(0.568)PPAS(0.864)PLQHLLPGK 41.871 0.024386 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AAPEAS(ph)SPPAS(ph)PLQHLLPGK ddPTM_A549_PD325901_60min_R1 1 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.513)S(0.513)PPAS(0.975)PLQHLLPGK 52.06100000000001 0.0042065 1656600.0 694.04 663.02 710.09 847.79 883.03 863.64 463.53 679.71 862.17 703.53 495.73 True False 764.4984298747561 718.8950222688924 758.2809775180515 900.1560628292116 821.0090190881232 856.606802178929 481.16988780334873 666.1526508278204 825.9359931769378 659.1089957348192 434.75835269138463 1.7584444902371756 1.6535508008496012 1.7441435519844308 2.070474453812718 1.8884260969470563 1.9703055660140372 1.1067524863516758 1.5322365785590601 1.8997587695876486 1.5160352679933238 1.0 8.76406993500798 -7.7443208015222735 24.999981418674817 1.4237468305238474 1.8460286643368982 0.4441258625554887 0.2430187509623323 263.88578931699743 385378.1048978019 0.053431220809134046 0.07914178576342996 1.8016863924670357e-08 7.7443208015222735 0.42228183381305073 AAPEAS(ph)SPPASPLQHLLPGK ddPTM_A549_MK2206_60min_R1 1 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.553)S(0.444)PPAS(0.003)PLQHLLPGK 142.99 2.3e-21 30164000.0 3642.8 4446.4 3794.4 4282.6 5642.8 3513.9 3543.5 3449.6 5894.4 5113.3 6040.8 True False 4257.615582090804 4672.702767890061 4332.502975965193 5331.8371922532215 4812.751594971961 3885.738565661958 4187.308082193063 3938.591363956936 4559.327811422608 3958.2019786589217 4540.702642401497 0.9376556708058353 1.029070418365637 0.954148138992385 1.1742317460879377 1.0599134041568912 0.8557571089056958 0.9221718337359501 0.8673968929781946 1.0041018253094107 0.8717157432193136 1.0 12.148699846555518 AAPEAS(ph)SPPASPLQHLLPGK ddPTM_A549_PD325901_60min_R1 1 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.5)S(0.5)PPASPLQHLLPGK 211.93 5.840099999999999e-67 48012000.0 5128.5 5722.3 4922.8 6020.8 7229.4 6211.8 5447.5 6941.0 6829.6 7064.6 7018.0 True False 5649.141544597844 6204.538303413594 5256.890811201206 6392.691141771093 6721.63188407606 6161.213160315728 5654.807593486379 6802.556309890835 6542.575662573757 6618.539950347826 6154.830490767432 0.9178386883394842 1.0080762277240172 0.8541081381667323 1.0386461741489816 1.0920904961003979 1.0010370179256554 0.9187592740318172 1.1052386121916804 1.0629985135070679 1.0753407360732326 1.0 12.587503408878442 -6.296473176181679 24.62785236238735 1.0306859604358714 0.9348145143242959 0.39984965618961765 0.05950353873757318 396.7476242533716 278902.6720234987 0.008067708062193195 0.01874848350694767 5.052738517733526e-07 6.296473176181679 -0.0958714461115755 AAPEASS(ph)PPAS(ph)PLQHLLPGK ddPTM_A549_MK2206_60min_R1 5 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.145)S(0.857)PPAS(0.999)PLQHLLPGK;AAPEAS(0.141)S(0.861)PPAS(0.998)PLQHLLPGK;AAPEAS(0.118)S(0.882)PPAS(1)PLQHLLPGK;AAPEAS(0.486)S(0.537)PPAS(0.977)PLQHLLPGK;AAPEAS(0.126)S(0.874)PPAS(1)PLQHLLPGK 126.04 1.2992e-15 55800400.0 26459.4 29550.3 27184.9 23295.8 35915.1 27106.0 24615.6 23754.7 37815.0 32466.1 33532.5 True False 30925.099849778562 31054.28405046368 31040.12759627773 29003.272045788184 30632.0363664453 29974.33892849343 29087.93589051262 27122.001470717714 29249.962878146383 25131.985461314292 25205.45480008084 1.2269209222790687 1.23204617003634 1.2314845275546535 1.1506744185268645 1.215293935753425 1.189200479270753 1.154033367825576 1.076036980321844 1.1604616187307428 0.9970851809916038 1.0 14.621448365711906 -14.999999999571234 0.11421211384332113 0.38196098030043224 1.2883871093870516 0.8682218709463116 0.030281389398215234 23.378227082746676 0.18779813780587853 3.353548362788439 0.14265842435774415 1.000000000987271e-15 14.999999999571234 0.9064261290866193 AAPEASS(ph)PPAS(ph)PLQHLLPGK ddPTM_A549_PD325901_60min_R1 3 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.108)S(0.892)PPAS(1)PLQHLLPGK;AAPEAS(0.116)S(0.904)PPAS(0.98)PLQHLLPGK;AAPEAS(0.123)S(0.877)PPAS(1)PLQHLLPGK 148.2 1.3758e-21 122344600.0 31691.54 33750.03 34799.34 33578.9 37389.1 35407.0 35630.7 42031.0 40879.3 54422.9 55256.0 True False 34908.841810721344 36594.26347384057 37161.03247783102 35652.99238978497 34763.01860139266 35118.65713115341 36986.64578636717 41192.65873231838 39161.285182595086 50986.62880612978 48459.86229664365 0.7203660959048813 0.7551458411051882 0.7668414790440873 0.7357221151710601 0.7173569414744366 0.7246957681426541 0.763242899039952 0.8500366443503369 0.8081179625082717 1.052141429829468 1.0 15.564502684787913 -10.38958939180728 0.3389769178830045 1.0717572921300063 0.7269405469607042 0.9208816487557376 0.030903979335339886 0.47273519581692086 0.08193982084988255 0.061127890613262036 0.012111455393838125 4.0776562182028325e-11 10.38958939180728 -0.34481674516930205 AAPEASS(ph)PPASPLQHLLPGK ddPTM_A549_MK2206_60min_R1 1 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.107)S(0.892)PPAS(0.001)PLQHLLPGK 161.68 1.6246e-27 27687000.0 2650.6 3857.8 3662.9 3266.2 4752.4 3276.2 3210.1 3838.4 5341.1 5093.4 5836.3 True False 3097.956479051795 4054.1455420039333 4182.354298614515 4066.4191466252882 4053.328255466212 3622.8853094344495 3793.333617792563 4382.504954606999 4131.349377984071 3942.797402480069 4386.985636314375 0.706169733816241 0.924130115322176 0.9533549104866054 0.9269278460737328 0.9239438173477864 0.8258256602084827 0.8646788324065371 0.9989786422662781 0.9417284943414879 0.8987486464151087 1.0 12.099014267414958 -2.000000000000052 0.10489170804588581 1.0423110221338474 0.434159880721252 0.20893157233799908 0.07105681663819208 85.81562485722644 0.6128714476058975 0.3672919797049489 7.565008703910017 0.009999999999998803 2.000000000000052 -0.6081511414125954 AAPEASS(ph)PPASPLQHLLPGK ddPTM_A549_PD325901_60min_R1 1 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.275)S(0.725)PPASPLQHLLPGK 232.82 3.1433999999999995e-76 48927000.0 5897.0 6750.5 6330.8 7811.2 10250.0 8614.8 7384.2 8825.1 8579.2 8887.8 9962.2 True False 6495.659098858043 7319.388325881806 6760.446158193016 8293.680083477673 9530.075360580351 8544.643925027833 7665.209771789283 8649.07645734298 8218.64605897165 8326.622791198566 8736.912555588955 0.7434730584207124 0.8377545590976109 0.7737797666142825 0.9492689815434002 1.0907829625104826 0.9779935269652975 0.8773362126516753 0.9899465517495896 0.9406808190742653 0.95303950202318 1.0 13.092907835822002 -6.3063657778740785 5.356888985976025 0.9741641022946675 0.7899199717326622 0.7157197718309999 0.052661289442455586 0.08013399641439628 5.701777721734856 0.00745230838184312 0.017967188117194312 4.938945366561818e-07 6.3063657778740785 -0.1842441305620054 AAPEASSPPAS(ph)PLQHLLPGK ddPTM_A549_MK2206_60min_R1 2 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEASSPPAS(0.999)PLQHLLPGK;AAPEAS(0.005)S(0.004)PPAS(0.991)PLQHLLPGK 128.55 3.3434999999999995e-17 7637600.0 2707.35 3498.8999999999996 3111.5 2388.87 3778.3 3042.1 2781.8 3030.0 4060.6000000000004 4249.2 4126.9 True False 3164.2844916475037 3676.9790649897777 3552.7574872748546 2974.1432572404483 3222.5170750837465 3364.013002817451 3287.2170517975605 3459.5117789858277 3140.880583445754 3289.3027688024345 3102.0768333543156 1.020053551744533 1.1853281728724343 1.1452835239523105 0.9587587339106842 1.0388256797621602 1.0844389689664458 1.0596826669322212 1.1152244012102734 1.0125089584094793 1.0603550284232222 1.0 11.599018704668097 -7.8480976932757915 0.20484615253853797 0.9759666685521835 1.1315290359554566 0.011365195728373134 0.06341092391503203 3.7985629162356402 0.48312176833145304 0.1104081817345563 0.19840969575416464 1.4187383447428005e-08 7.8480976932757915 0.15556236740327312 AAPEASSPPAS(ph)PLQHLLPGK ddPTM_A549_PD325901_60min_R1 2 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEASSPPAS(1)PLQHLLPGK;AAPEAS(0.003)S(0.018)PPAS(0.979)PLQHLLPGK 126.31 8.6157e-16 8982000.0 2642.1 2785.7 2500.1000000000004 3203.8 3883.4 3297.4 3472.8999999999996 3378.3 3231.6000000000004 3663.1 3450.6000000000004 True False 2910.3240469887805 3020.460715414999 2669.7718203226104 3401.6914496422805 3610.643381002705 3270.5470676494874 3605.0631099437987 3310.9171562749207 3095.7870901917163 3431.8112408514417 3026.198075155611 0.9617097013185852 0.9981041030368387 0.8822197866824455 1.12408089793242 1.1931285696879048 1.0807445469283472 1.1912845823082554 1.094084747279693 1.0229955255101821 1.134033911734272 1.0 11.563290704699375 -6.261475052769955 24.99999830414841 1.0539844983820794 0.9524204904913026 0.3465682526874364 0.07557897801898246 3.8325136228269416 2686836.508136435 0.012091863707751008 0.02985893073987456 5.476775603661503e-07 6.261475052769955 -0.1015640078907768 AAPFSLEYR ddPTM_A549_PD325901_60min_R1 2 AAPFSLEYR 9 0 Q15181;Q5SQT6 Q15181 PPA1 Inorganic pyrophosphatase 0 ; 98.523 0.0023048 4987200.0 2359.6400000000003 2142.15 2325.0 2588.3999999999996 2827.9 2556.8999999999996 2733.6 2347.8 2496.1 2593.9 2444.6000000000004 False True 2599.188915724842 2322.676498376079 2482.7884813607716 2748.279589317084 2629.2780597253814 2536.0774541374935 2837.6286438833163 2300.9712871865313 2391.1975974215716 2430.1207113222576 2143.9296975961884 1.2123480161868638 1.083373443159216 1.1580549885308822 1.2818888568960556 1.2263825920567144 1.1829107348906953 1.3235642227750823 1.073249411940336 1.11533395899251 1.1334889917551643 1.0 11.06604188327855 -9.317087882865867 0.7236573839160249 1.0189171285827712 1.200953691066808 0.28825345263024393 0.07668994849580858 0.3395889356334147 0.38809202629084905 0.02391118806868764 0.01702865638093106 4.818502816071258e-10 9.317087882865867 0.18203656248403677 AAPGAEFAPNKR ddPTM_A549_MK2206_60min_R1 1 AAPGAEFAPNKR 12 1 Q15233;Q15233-2 Q15233 NONO Non-POU domain-containing octamer-binding protein 0 54.471000000000004 0.014625999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AAPGAEFAPNKR ddPTM_A549_PD325901_60min_R1 2 AAPGAEFAPNKR 12 1 Q15233;Q15233-2 Q15233 NONO Non-POU domain-containing octamer-binding protein 0 ; 93.258 0.00026763 12048000.0 4524.299999999999 4352.6 4888.6 5337.0 5930.1 5372.9 4553.9 4470.5 5654.5 4622.9 6088.3 False True 4983.603605386375 4719.4088774510265 5220.3697935399 5666.654368793571 5513.590233734392 5329.144883779316 4727.201156489695 4381.332370460593 5416.86102905343 4331.009305050952 5339.4776969135555 0.9333503927298188 0.8838708850079184 0.9776929673397633 1.0612750329623322 1.0326085334004638 0.9980648269885625 0.8853302560327609 0.8205544847566624 1.014492678222929 0.8111297679086588 1.0 12.382482910296641 -11.940099993441468 0.007410272551210637 2.0149188127029243 5.1347645993495294e-08 0.0 0.09208274926039851 21254.60451917303 23.2923626977501 3350.401505641886 2991.054408040822 1.147889297125122e-12 11.940099993441468 -2.014918761355278 AAPGPRRS(ph)EDEPPAASASAAPPPQRDEEEPDGVPEK ddPTM_A549_MK2206_60min_R1 4 AAPGPRRSEDEPPAASASAAPPPQRDEEEPDGVPEK 36 3 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 AAPGPRRS(1)EDEPPAASASAAPPPQRDEEEPDGVPEK;AAPGPRRS(0.987)EDEPPAAS(0.012)AS(0.001)AAPPPQRDEEEPDGVPEK;AAPGPRRS(1)EDEPPAASASAAPPPQRDEEEPDGVPEK;AAPGPRRS(0.942)EDEPPAAS(0.029)AS(0.029)AAPPPQRDEEEPDGVPEK 128.61 7.6422e-30 89183000.0 6045.9 6053.5 5780.320000000001 4573.01 6500.1 3986.14 3969.85 4277.74 6471.5 6840.799999999999 6993.3 True False 7066.300111936633 6361.597293410961 6600.056294020437 5693.397655290219 5543.943900630401 4407.950689014415 4691.120358429271 4884.12274502932 5005.715582861937 5295.458528858062 5256.670604738846 1.3442539286304949 1.2101951542628584 1.2555582782894061 1.0830805434446789 1.0546492861151657 0.8385442080089026 0.8924128428743973 0.9291285515638592 0.9522597018632525 1.007378800582302 1.0 12.359933619762375 -6.462595784272461 1.554593704675277 0.9580253906894187 1.281653733262567 0.8521282405220042 0.058389616357947885 0.11711226637431638 0.5463121720307208 0.009105393680921127 0.028937557180542448 3.44670580597482e-07 6.462595784272461 0.3236283425731483 AAPGPRRS(ph)EDEPPAASASAAPPPQRDEEEPDGVPEK ddPTM_A549_PD325901_60min_R1 1 AAPGPRRSEDEPPAASASAAPPPQRDEEEPDGVPEK 36 3 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 AAPGPRRS(0.992)EDEPPAAS(0.004)AS(0.004)AAPPPQRDEEEPDGVPEK 68.154 0.00012808 14044000.0 1579.0 1532.8 1633.0 1950.7 2002.1 1776.4 1859.4 2179.3 1966.7 2186.5 2599.9 True False 1739.2989176016374 1661.974435362068 1743.8252000267273 2071.190308638864 1861.4794028700408 1761.933587363544 1930.1604845027225 2135.8321518722228 1884.0464383834794 2048.4440168495753 2280.1287821240007 0.7628073165154444 0.7288949854024888 0.7647924159802534 0.9083654944741739 0.816392221993717 0.7727342425467107 0.8465138020426752 0.9367155787940356 0.8262894855563553 0.8983896141784566 1.0 11.154899595054179 -14.999999999999734 0.11344526861049006 1.599655413142349 0.7109900578350344 0.5097371680576137 0.0567521830352409 40.44292610573452 0.3231075681655653 5.645993583530281 0.24481203596804058 1.0000000000006136e-15 14.999999999999734 -0.8886653553073146 AAPPPPPPPPPLES(ph)SPR ddPTM_A549_MK2206_60min_R1 2 AAPPPPPPPPPLESSPR 17 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AAPPPPPPPPPLES(0.677)S(0.323)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR 181.72 3.8858999999999997e-39 85852000.0 11366.9 12508.3 11948.8 10629.7 16589.2 12084.7 11619.1 10280.7 18799.5 18661.4 19573.1 True False 13285.3548259767 13144.91904273103 13643.319512759052 13233.976977185359 14148.950655580351 13363.494932825366 13730.140069933514 11738.020708323304 14541.443266632625 14445.776779094833 14712.559079921339 0.9029941530775304 0.8934488535492296 0.927324705283834 0.8995020448377438 0.9616920196357844 0.9083052690040117 0.9332258239609341 0.7978231825313467 0.9883694051891869 0.9818670362254931 1.0 13.844760588127588 -8.955831027655652 24.999981168461364 0.9948690022215965 0.9057074288601206 0.5007528547961086 0.03860772659737814 69.41274858636427 39288.295598956065 0.006267608871077955 0.006668848225280703 1.1070544254059366e-09 8.955831027655652 -0.0891615733614759 AAPPPPPPPPPLES(ph)SPR ddPTM_A549_PD325901_60min_R1 4 AAPPPPPPPPPLESSPR 17 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AAPPPPPPPPPLES(0.607)S(0.393)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.691)S(0.309)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR 202.34 2.2529e-48 150004800.0 29908.27 30048.43 32886.409999999996 31757.23 36659.73 32970.5 32918.75 32866.65 33011.799999999996 34657.119999999995 36733.3 True False 32944.53555309533 32580.716651074246 35118.279544648445 33718.80197119771 34084.87703400275 32701.999179334434 34171.49104508117 32211.098882361865 31624.428847626845 32468.86352857891 32215.336971574132 1.0226351374863663 1.0113417928802828 1.0901105760785859 1.0466692308992513 1.0580326092531096 1.0151065378639286 1.0607212047861891 0.999868444982711 0.9816575525977367 1.0078697471713078 1.0 14.975460064939753 -8.367848134073611 5.364280089566738 0.9913540973451442 1.0435711830775107 0.4954088933529198 0.022218628245429504 0.12558797570791372 5.300116930263592 0.0035625926098312925 0.004316320005847424 4.286984032560789e-09 8.367848134073611 0.0522170857323665 AAPQS(ph)PSVPK ddPTM_A549_MK2206_60min_R1 2 AAPQSPSVPK 10 0 E9PF10;O75694-2;O75694 E9PF10 NUP155 Nuclear pore complex protein Nup155 1 AAPQS(0.853)PS(0.147)VPK;AAPQS(0.992)PS(0.008)VPK 171.09 1.7807e-10 403800000.0 32181.0 32697.0 29977.0 26535.0 39469.0 29424.0 27855.0 29308.0 42333.0 40076.0 42923.0 True False 37612.36605008897 34361.13763982129 34228.189360770775 33036.07619120142 33663.162384268144 32537.628149929544 32915.89293903985 33462.498751985695 32744.64309190984 31022.80376600919 32264.034485465436 1.1657676000511619 1.0649981686357475 1.0608775345870078 1.0239288643856297 1.043364939354779 1.0084798342435246 1.0202038729492453 1.0371455177764626 1.0148961099908602 0.9615289674942727 1.0 14.977639232433628 -2.0000000000000004 0.5362172900912134 1.0103942535017567 7.054032678040483 0.8358333482405755 0.01999641223942998 21.674617917203893 0.18685297343213245 0.002449606175971476 150.82833889240234 0.00999999999999999 2.0000000000000004 6.043638424538726 AAPQS(ph)PSVPK ddPTM_A549_PD325901_60min_R1 4 AAPQSPSVPK 10 0 E9PF10;O75694-2;O75694 E9PF10 NUP155 Nuclear pore complex protein Nup155 1 AAPQS(0.717)PS(0.283)VPK;AAPQS(0.948)PS(0.052)VPK;AAPQS(0.998)PS(0.002)VPK;AAPQS(0.992)PS(0.008)VPK 184.58 4.8255e-14 580050000.0 55484.0 58137.0 58311.0 58064.0 65214.0 57753.0 60921.0 61418.0 65050.0 62448.0 72038.0 True False 61116.69483483804 63036.40902181927 62268.335112528155 61650.481407088264 60633.593616086546 57282.67871594614 63239.381992250324 60192.96980851106 62316.17471746848 58505.02262255766 63177.78268650667 0.9673763819490798 0.9977622882811683 0.9856049463069753 0.9758253421618641 0.9597296872059503 0.9066902363476015 1.0009750153158954 0.952755339755963 0.9863621682749842 0.9260379224270086 1.0 15.947129684103128 -9.081108623926104 2.200419424491161 0.9951471670184093 0.9688646181177896 0.0 0.03204854196476146 0.35573728713505903 3.5348412681402155 0.004802111146518356 0.004667970593630399 8.296432346531576e-10 9.081108623926104 -0.026282548900619762 AAPREEPLT(ph)PR ddPTM_A549_PD325901_60min_R1 1 AAPREEPLTPR 11 1 O15357;O15357-2;A0A0A0MTP6 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 AAPREEPLT(1)PR 51.726000000000006 0.0095276 2685200.0 541.62 374.4 464.66 669.52 924.2 714.44 457.6 452.13 744.73 912.18 682.24 True False 596.6048636804297 405.952001956914 496.1946218275681 710.8747298097568 859.2873803169127 708.6218375118276 475.0142184083282 443.11191246087674 713.4315879683373 854.584799126387 598.3288050756869 0.9971187390935673 0.6784764472530488 0.829300908828551 1.1881004621193745 1.436145766387121 1.1843351540165092 0.7939016379935782 0.7405826172865342 1.1923737950040534 1.428286239734496 1.0 9.224794709460726 -6.241472879145129 20.355786330202964 1.0829801534308203 0.8193157548999874 0.23615541299938914 0.22084339352808458 85.52873826561714 87192.77751009953 0.028842732409991856 0.07606003782693055 5.734916788797728e-07 6.241472879145129 -0.2636643985308329 AAPSTAPAEAT(ph)PPKPGEAEAPPK ddPTM_A549_MK2206_60min_R1 2 AAPSTAPAEATPPKPGEAEAPPK 23 1 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAPSTAPAEAT(1)PPKPGEAEAPPK;AAPSTAPAEAT(1)PPKPGEAEAPPK 137.26 7.192800000000001e-23 74186000.0 8770.6 10586.5 8374.7 11077.4 16877.1 11379.6 7917.5 8938.7 19813.6 19279.5 25885.0 True False 10250.862859417372 11125.307631402524 9562.358389420122 13791.36349728339 14394.500946959175 12583.781718832864 9356.007264219992 10205.788098620666 15325.851235817563 14924.247559805737 19457.040110343474 0.5268459540240118 0.5717882868262294 0.49146007487216503 0.7088109711996647 0.739809388546564 0.6467469690902911 0.48085460127341184 0.5245293241285559 0.7876763962505403 0.767035863377386 1.0 14.248004637309036 -9.344858164242698 1.007028550079621 0.9544976564248875 0.5905543369970704 0.5126103738800406 0.10663375779950841 0.1784197469235866 0.38093077139968273 0.026912476737815518 0.02115033059136245 4.520035396111138e-10 9.344858164242698 -0.3639433194278171 AAPSTAPAEAT(ph)PPKPGEAEAPPK ddPTM_A549_PD325901_60min_R1 3 AAPSTAPAEATPPKPGEAEAPPK 23 1 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAPSTAPAEAT(1)PPKPGEAEAPPK;AAPSTAPAEAT(1)PPKPGEAEAPPK;AAPSTAPAEAT(1)PPKPGEAEAPPK 157.62 2.806e-33 93746000.0 22313.100000000002 23153.9 22333.5 23659.9 27623.1 24234.1 22558.800000000003 22506.0 24073.6 26705.6 31166.2 True False 24578.309485963953 25105.16041161912 23849.185612245492 25121.31828746842 25682.948750521653 24036.745524390244 23417.287478649032 22057.100174384548 23061.870310199076 25019.403858393787 27332.95497881958 0.8992188918106289 0.9184941924893673 0.8725432588875343 0.9190853424715708 0.9396330828636522 0.8794053018788645 0.856741888932067 0.8069782499358992 0.8437386417996083 0.9153567141855473 1.0 14.738353818292236 -10.852792372255053 1.1376251368792258 0.999019239621222 0.8799397326955524 0.2481433220160516 0.043089666843037146 0.2977716638411407 0.6930601902593153 0.0273621566217102 0.00690483952852875 1.4034845228497662e-11 10.852792372255053 -0.1190795069256696 AAPSTAPAEAT(ph)PPKPGEAEAPPKHPGVLK ddPTM_A549_MK2206_60min_R1 2 AAPSTAPAEATPPKPGEAEAPPKHPGVLK 29 2 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAPSTAPAEAT(1)PPKPGEAEAPPKHPGVLK;AAPS(0.001)T(0.004)APAEAT(0.995)PPKPGEAEAPPKHPGVLK 85.412 7.8967e-07 13632400.0 1328.52 1415.23 1543.56 1356.13 1657.37 1594.9099999999999 1141.65 1573.81 2112.8 1801.64 1608.3 True False 1552.7416968044563 1487.2591620639296 1762.460018337771 1688.3819108789887 1413.5730685047622 1763.6823175844258 1349.0730272430385 1796.9023870909848 1634.2541734483043 1394.6482727066773 1208.9147231781112 1.2844096171833028 1.2302432368050575 1.4578861391516904 1.3966096024047157 1.1692909693320845 1.4588972106716414 1.1159372959711051 1.4863764603404905 1.351835776432617 1.1536366014637425 1.0 10.239496765157186 -10.651833126001433 0.835058692432485 0.991261939660229 1.328871363926134 0.3587844759204054 0.12334049662558086 0.3893587951639029 0.4649996367965333 0.08331187566169812 0.020227552945783184 2.2292915712422774e-11 10.651833126001433 0.337609424265905 AAPT(ph)TPPPPVK ddPTM_A549_MK2206_60min_R1 1 AAPTTPPPPVK 11 0 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.5)T(0.5)PPPPVK 92.611 0.00031032 20743000.0 12565.0 14949.0 13715.0 12061.0 19949.0 13712.0 14201.0 15376.0 22006.0 18935.0 22021.0 True False 14685.66481524403 15709.840247658458 15659.993230909407 15015.94554143886 17014.5285262805 15162.994738711053 16781.137879278573 17555.595087025104 17021.676136360933 14657.570349071366 16552.577951318268 0.8872131494221084 0.9490872233836728 0.9460757881319765 0.907166580674098 1.0279080742782694 0.916050344744243 1.0138081166953272 1.0605958261399975 1.0283398867791047 0.8855158629779489 1.0 14.014768304010802 -7.099436493885857 0.8526106968943061 1.0170689052774755 0.9211619237215212 0.1645045555660154 0.054726558680727316 0.36797005698389224 0.5165032307970998 0.006434506094112594 0.018070649890871798 7.95359561052554e-08 7.099436493885857 -0.09590698155595434 AAPT(ph)TPPPPVK ddPTM_A549_PD325901_60min_R1 1 AAPTTPPPPVK 11 0 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.5)T(0.5)PPPPVK 89.40299999999999 0.00032003 30952000.0 11489.0 10555.0 11435.0 11237.0 12733.0 11774.0 12184.0 12210.0 12843.0 13234.0 14370.0 True False 12655.354822245225 11444.50689277572 12211.047864241043 11931.083968921375 11838.678006465332 11678.116447657252 12647.668787340624 11966.461971440298 12303.253372735551 12398.402981471436 12602.581098935309 1.0041875329264396 0.9081081726776251 0.9689322979459071 0.946717491858024 0.9393851873300373 0.9266448163260653 1.0035776550891726 0.9495246947826623 0.9762486966876138 0.9837987063236496 1.0 13.621431617820974 -9.103677829974188 0.5332274556306792 0.998031504109479 0.9496101426137744 0.2046153027552955 0.027784507441650754 0.6371431882026164 0.42203398624962046 0.010867089983000334 0.008080207931068908 7.876298556816479e-10 9.103677829974188 -0.04842136149570464 AAPT(ph)TPPPPVKR ddPTM_A549_MK2206_60min_R1 1 AAPTTPPPPVKR 12 1 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.542)T(0.458)PPPPVKR 43.761 0.042109 7802900.0 2234.7 2386.9 2063.1 2034.1 2887.8 2396.5 2561.3 2464.5 2989.5 3123.2 3379.2 True False 2611.8627268305463 2508.3830147258 2355.6786026022005 2532.454591314219 2463.008445445527 2650.0960393320456 3026.6550559957923 2813.8504222147085 2312.383023250523 2417.6669508433947 2540.051378824517 1.028271612379456 0.9875323923119332 0.9274137610918561 0.9970091992730424 0.969668750001961 1.0433237931425052 1.191572375751102 1.1077927185539451 0.9103686021975845 0.9518181289554232 1.0 11.310641964031836 -8.777785536722055 24.998677850918398 0.9576740682192628 1.0291424839351804 0.19579751187109373 0.06972974462721945 349.44310279298185 534411.6043384798 0.013932843746739788 0.014853947306112497 1.6680707358002202e-09 8.777785536722055 0.07146841571591755 AAPTRGS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 AAPTRGSPTK 10 1 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 AAPT(0.011)RGS(0.805)PT(0.184)K;AAPT(0.008)RGS(0.845)PT(0.147)K 57.802 0.0034757 52734000.0 3313.9 3535.3 3275.5 2777.0 3953.1000000000004 2980.7 2828.0 2949.0 3891.1 4952.5 4663.2 True False 3873.205302923768 3715.2316695128075 3740.01515332437 3457.365124664268 3371.604226639904 3296.1156955714737 3341.810993775075 3367.0297809337308 3009.772062809872 3833.7268103393717 3505.1987422273014 1.104988786017487 1.059920404727763 1.0669908979106446 0.9863535219881316 0.9618867501069261 0.9403505872186378 0.9533870229713693 0.9605817040759936 0.8586594610316955 1.0937259460224826 1.0 11.775280530979884 -6.333899281632585 1.0938201016817641 0.9352965503560807 1.0972402212109704 0.3475320053061115 0.058028845989350764 0.3121492113799973 0.6531914598253225 0.007797304821341089 0.037096863837585384 4.635544113855419e-07 6.333899281632585 0.1619436708548897 AAPTRGS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 AAPTRGSPTK 10 1 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 AAPT(0.001)RGS(0.863)PT(0.136)K;AAPT(0.001)RGS(0.987)PT(0.013)K 75.479 0.00042976 79552000.0 6035.4 6229.0 5844.1 5973.2 6153.6 5652.0 4657.3 5269.8 6316.0 6340.9 6980.0 True False 6648.109364973348 6753.939690677399 6240.715769428168 6342.150997878538 5721.392364767533 5605.971985914631 4834.53610007235 5164.689704921872 6050.560484481648 5940.534491855237 6121.504249865582 1.0860254430304985 1.1033137305794902 1.0194742198480387 1.036044530724258 0.9346383064086192 0.9157834017737925 0.7897627613635174 0.8436961723967242 0.988410730028409 0.9704370444545034 1.0 12.57967049757329 -6.240135304919477 1.5762975167951765 0.9584310646118555 1.091846205724698 0.4477947552288858 0.06791593284644125 0.4100545078627404 1.8960689544283507 0.012084721941402837 0.046797541618685094 5.752606863214816e-07 6.240135304919477 0.13341514111284258 AAPTT(ph)PPPPVK ddPTM_A549_MK2206_60min_R1 1 AAPTTPPPPVK 11 0 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.048)T(0.952)PPPPVK 98.75399999999999 0.00029174 21048000.0 12218.0 15182.0 13185.0 12333.0 18625.0 14352.0 12962.0 14801.0 19867.0 18313.0 20613.0 True False 14280.09969857951 15954.69895243499 15054.831261359128 15354.585553649415 15885.287172388315 15870.71911391343 15317.027617154357 16899.087076161457 15367.156221079838 14176.080581069124 15494.223210141381 0.921640246490886 1.0297191886323294 0.9716415632572881 0.9909877601091631 1.0252393396521466 1.0242991144935631 0.9885637640181248 1.0906701708737845 0.9917990732843984 0.9149268336208363 1.0 13.919442807983206 -5.250377343081613 24.274777909217267 1.004799183230915 0.9216401737099339 0.24206087756534178 0.04113804671017198 845.9881843890369 1856403.0018972089 0.004061899428962135 0.08114356921346284 5.618529389467394e-06 5.250377343081613 -0.08315900952098121 AAPTT(ph)PPPPVK ddPTM_A549_PD325901_60min_R1 1 AAPTTPPPPVK 11 0 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.076)T(0.924)PPPPVK 125.74 2.7427e-06 27132000.0 11245.0 11269.0 12343.0 13534.0 13946.0 13245.0 12421.0 12933.0 12638.0 12995.0 15887.0 True False 12386.584121868535 12218.678178558943 13180.67020448861 14369.964442055878 12966.481071088154 13137.137111365759 12893.687952032 12675.041169257767 12106.868809828855 12174.493482259431 13932.99971599061 0.8890105773599286 0.876959623026176 0.94600376610655 1.0313618556644175 0.9306309721808719 0.9428793066211394 0.9254064605509311 0.909713731976244 0.8689348350401569 0.8737883966427575 1.0 13.766218277078362 -8.400118197135145 0.005957277502630141 1.8637329434985506 6.148332643707971e-07 0.0 0.05136782700823234 6298.537775188137 28.884606935862674 4504.019466469471 4530.590969628444 3.979988368620872e-09 8.400118197135145 -1.8637323286652863 AAPTT(ph)PPPPVKR ddPTM_A549_MK2206_60min_R1 1 AAPTTPPPPVKR 12 1 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.345)T(0.655)PPPPVKR 41.577 0.057451 10565000.0 2386.1 2332.8 2212.9 2116.6 3231.7 2264.0 2500.5 2554.0 3584.5 3686.0 3449.1 True False 2788.8153454559306 2451.5295558055814 2526.7224951279213 2635.167095017785 2756.321211007104 2503.5749772784293 2954.80848300374 2916.037321296964 2772.6164732702787 2853.330039961822 2592.5932796826582 1.0756856338828782 0.9455897209243929 0.9745927041194832 1.0164213244201334 1.0631521853456654 0.9656643781722967 1.1397115413974297 1.124756954416659 1.069437499124296 1.1005698665974628 1.0 11.340180181787229 -6.5433410035873925 5.453745532874919 1.045306677848473 0.9934498445262981 0.16362194555079212 0.057990693327803725 0.2751372584328203 24.526885432615252 0.00845448859028366 0.018327783850608546 2.8619299293298747e-07 6.5433410035873925 -0.05185683332217483 AAPWGSNPS(ph)PSAESTQAMDR ddPTM_A549_MK2206_60min_R1 2 AAPWGSNPSPSAESTQAMDR 20 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AAPWGS(0.001)NPS(0.663)PS(0.089)AES(0.123)T(0.123)QAMDR;AAPWGSNPS(0.5)PS(0.5)AESTQAMDR 175.51 7.037799999999998e-69 5297300.0 424.53 547.11 375.2 146.11 664.97 670.7 387.52 370.02 833.8 742.34 1135.5 True False 496.1802852380058 574.9555621042489 428.40900184011724 181.9069565591272 567.1537938804323 741.6730288253724 457.92736785987154 422.4714681387246 644.9456313049966 574.644878422479 853.5240117942831 0.5813313724999168 0.6736255268268013 0.5019296421895775 0.21312459174607326 0.6644848721808756 0.8689539117548938 0.5365137495044973 0.49497314932078207 0.7556268158750311 0.6732615257237546 1.0 9.737287930267634 -9.586141690956504 0.4645830686365141 1.019525837621829 0.5381029516744169 0.17263198007529723 0.180710037502876 0.5845414252440885 0.2804828993995056 0.11458288879932389 0.05325447085947341 2.593333134925411e-10 9.586141690956504 -0.4814228859474121 AAPWGSNPS(ph)PSAESTQAMDR ddPTM_A549_PD325901_60min_R1 2 AAPWGSNPSPSAESTQAMDR 20 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AAPWGS(0.064)NPS(0.491)PS(0.348)AES(0.037)T(0.059)QAMDR;AAPWGS(0.005)NPS(0.853)PS(0.139)AES(0.002)T(0.002)QAMDR 105.38 4.2999999999999996e-10 14577200.0 5193.0 4741.5 4225.3 5253.0 4553.0 5069.8 4018.0 4613.7 5105.6 5333.200000000001 6079.6 True False 5720.189537115451 5141.082845295695 4512.054266792973 5577.465879571412 4233.2129869973005 5028.513229686831 4170.907188733963 4521.676134122367 4891.029387202264 4996.4608418303915 5331.847741759714 1.0728343745291513 0.9642216159006334 0.8462458954808455 1.0460662325159786 0.7939485881868371 0.9431089320692472 0.7822629960092229 0.8480504982743639 0.9173235291201389 0.937097434853113 1.0 12.380419867537483 -4.2182097292895016 14.482339283870493 0.9356756243734297 0.9223276098028373 0.0 0.0932460135694103 0.0 0.0 0.012146798583636565 0.0 6.050486143946139e-05 4.2182097292895016 -0.013348014570592315 AAPWGSNPSPS(ph)AESTQAMDR ddPTM_A549_MK2206_60min_R1 2 AAPWGSNPSPSAESTQAMDR 20 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AAPWGSNPS(0.424)PS(0.455)AES(0.06)T(0.06)QAMDR;AAPWGSNPS(0.347)PS(0.648)AES(0.004)T(0.001)QAMDR 165.9 1.4194999999999998e-27 11827600.0 1718.21 1287.47 1240.5700000000002 1246.05 1981.75 1091.47 1460.02 1569.42 2229.6800000000003 1817.03 2107.9 True False 2008.201841798681 1352.9967237710093 1416.5014803112863 1551.3323059373101 1690.23720020835 1206.968630940851 1725.2867351950092 1791.8900911471746 1724.6610400673112 1406.5616610178593 1584.4502549195663 1.2674439197844216 0.8539218694749703 0.8940018633675528 0.9790981453160628 1.0667657094063543 0.7617586145057751 1.0888866531708137 1.1309222776691963 1.0884917558707847 0.8877285081375196 1.0 10.629766650530906 AAPWGSNPSPS(ph)AESTQAMDR ddPTM_A549_PD325901_60min_R1 1 AAPWGSNPSPSAESTQAMDR 20 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AAPWGS(0.007)NPS(0.389)PS(0.604)AES(0.001)TQAMDR 132.47 7.3274e-17 4679900.0 975.04 1155.7 841.7 1238.5 1038.4 1135.4 933.21 1071.6 1241.0 1175.7 1472.4 True False 1074.025343013489 1253.094894929503 898.8228235532737 1314.999332162421 965.4663662855261 1126.1536788406704 968.723817222107 1050.2260973460632 1188.8450856937498 1101.4661013537827 1291.30413431262 0.8317369351451882 0.9704103484471098 0.6960581939371937 1.018349819550771 0.7476676800074352 0.872105686736718 0.7501902855269436 0.8133065398300718 0.9206545956941348 0.8529873575756104 1.0 10.334613115972974 -9.181310899181916 1.5683884412875906 0.9753807550459015 0.8394235434484996 0.08231254238083141 0.09805797355922788 0.2881448482888114 1.4632908581450907 0.01794072126542663 0.016407099503933736 6.587021800910508e-10 9.181310899181916 -0.13595721159740193 AAQEEYVK ddPTM_A549_PD325901_60min_R1 2 AAQEEYVK 8 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BR68 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 133.23 0.0029841 27173000.0 19501.8 20618.9 20687.6 20507.0 24223.0 21376.0 21318.0 21582.0 22010.0 22014.0 23723.0 False True 21481.608379533627 22356.52706503585 22091.584940644767 21773.670815223853 22521.660044813434 21201.92094319021 22129.268155657213 21151.530079248525 21084.996241836772 20624.03228306726 20805.221392487267 1.032510444098932 1.0745632859791994 1.061828880543516 1.0465483834306273 1.082500379108966 1.0190673073465197 1.06364011890054 1.0166452776554595 1.0134473382460871 0.9912911712881155 1.0 14.344658020017873 -8.358562983096082 0.882464008024949 1.0038614289572376 1.0585124325939836 0.6305564288300594 0.018017277726673032 0.2237007970284956 0.34457486287187095 0.0034233196182437225 0.004360728533094705 4.379625915047538e-09 8.358562983096082 0.05465100363674602 AAQEFKHDS(ph)FVPCSEK ddPTM_A549_PD325901_60min_R1 1 AAQEFKHDSFVPCSEK 16 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 AAQEFKHDS(0.999)FVPCS(0.001)EK 53.909 0.006283100000000001 5580700.0 1450.6 1490.5 1675.2 1476.5 1830.8 1775.3 1611.9 1938.0 1752.4 1566.7 1909.4 True False 1597.8638441247213 1616.1096659102052 1788.889145795941 1567.7000516252035 1702.2109239171232 1760.8425453988393 1673.2417365655238 1899.3450696684104 1678.752722135154 1467.7782946253053 1674.5559046838607 0.9542015525760437 0.9650974693587853 1.0682767537305153 0.9361885424309973 1.0165148378479985 1.0515280740843755 0.9992152139473749 1.1342380773050318 1.002506227137329 0.8765179415747287 1.0 10.70956282557017 -5.553927348033455 24.8674903828136 1.013452519969538 0.9569254625420212 0.08216369645321486 0.0634505435567842 204.29073096578827 163620.42821543035 0.006315278869709148 0.02445947932889699 2.79301103753173e-06 5.553927348033455 -0.056527057427516736 AAQGQAGS(ph)PDKSK ddPTM_A549_PD325901_60min_R1 1 AAQGQAGSPDKSK 13 1 A0A087X165;Q9C0H9;A0A087WVV7;A0A590UJ70;Q9C0H9-2 A0A087X165 SRCIN1 SRC kinase signaling inhibitor 1 1 AAQGQAGS(0.864)PDKS(0.136)K 49.559 0.008398000000000001 5253300.0 2050.4 2238.2 1827.3 2051.2 2975.1 2089.1 1816.1 1964.7 2327.2 2848.3 3196.2 True False 2258.5550985752975 2426.820968963583 1951.311566447542 2177.897965386803 2766.1392395378134 2072.087062238897 1885.212679308052 1925.5125172226656 2229.3958770559975 2668.457851906082 2803.0876623811428 0.8057383038305408 0.8657670616344791 0.69612934073919 0.7769639154048936 0.9868186702331162 0.7392159332179852 0.672548598678722 0.686925543950701 0.7953357674023614 0.95197088828799 1.0 11.452801147871218 -10.379423419383665 0.8689621968855504 0.9930662752772755 0.7813540204212458 0.4259909841347852 0.08655225177776515 0.40393145462807606 0.5767398116660978 0.0497724671627567 0.017134010235388894 4.174231976217909e-11 10.379423419383665 -0.21171225485602974 AAQGQAGSPDKS(ph)K ddPTM_A549_PD325901_60min_R1 1 AAQGQAGSPDKSK 13 1 A0A087X165;Q9C0H9;A0A087WVV7;A0A590UJ70;Q9C0H9-2 A0A087X165 SRCIN1 SRC kinase signaling inhibitor 1 1 AAQGQAGS(0.209)PDKS(0.791)K 41.242 0.027248 4737000.0 2338.1 2193.3 2019.9 2348.9 2040.3 2167.0 1778.5 1855.2 1960.0 2613.0 2868.5 True False 2575.4621907817523 2378.137088387018 2156.982560645428 2493.986218261048 1896.9963666528877 2149.3526704665605 1846.181790732542 1818.1965806237542 1877.628016083602 2448.0147340626304 2515.6926849196884 1.023758667431977 0.9453209856047812 0.8574109920402649 0.9913715746009997 0.7540652234767888 0.8543780738207206 0.7338661839736915 0.7227419277095838 0.7463662105228659 0.9730976874628792 1.0 11.296739979128244 -6.744333331000747 24.998176194476535 0.845014072404981 0.9468799022401548 0.2777029413203935 0.09616187225989306 389.5278989334394 569239.0865268287 0.01701671897204841 0.03535331916275249 1.8016344142214463e-07 6.744333331000747 0.10186582983517378 AAQLAIR ddPTM_A549_MK2206_60min_R1 2 AAQLAIR 7 0 D3YTB1;F8W727;P62910 D3YTB1 RPL32 60S ribosomal protein L32 0 ; 99.919 0.031374 5980000.0 2727.4 2328.5 2309.7 2342.8 2782.1 1931.46 2317.3 1995.38 3279.8999999999996 3617.6 3645.0 False True 3187.718441472068 2447.010704172368 2637.250190698612 2916.786105172287 2372.856775425586 2135.845815200615 2738.3234143829477 2278.231225594963 2537.007886924033 2800.381647467683 2739.8459031177113 1.1634663240895105 0.8931198288881423 0.9625542033943026 1.0645803480601712 0.8660548291148334 0.7795496136371044 0.9994443159255668 0.8315180145724728 0.9259673633605211 1.022094579947393 1.0 11.419879038775045 -5.25322838269632 24.44493773700106 0.9431496456614403 1.1634664737079925 0.3825427888320977 0.0829697255834435 615.1945572607433 1831435.5911456537 0.011002410958651098 0.1683006967227528 5.581765888909916e-06 5.25322838269632 0.22031682804655217 AAQLAIR ddPTM_A549_PD325901_60min_R1 2 AAQLAIR 7 0 D3YTB1;F8W727;P62910 D3YTB1 RPL32 60S ribosomal protein L32 0 ; 128.82 0.015923 10961900.0 5862.7 5426.4 5200.4 5441.299999999999 5935.4 5963.0 5837.700000000001 6236.700000000001 6347.3 6366.5 7492.4 False True 6457.876988108367 5883.701771952455 5553.3304165456175 5777.3967429110835 5518.517980018399 5914.439305026351 6059.856868012016 6112.304125903498 6080.545054330328 5964.518103486315 6570.882298236798 0.9828021101277747 0.8954203567961126 0.8451422753434152 0.8792421596809556 0.8398442902407814 0.900098196343192 0.9222287956121343 0.9302105635865137 0.9253772596051454 0.9077195166145051 1.0 12.681871384559646 -9.790688821623759 0.44687490762151966 1.0053446124329275 0.8875141036299986 0.09506271516815279 0.044945233712641953 0.6616791366029439 0.2732531654043849 0.03251663342513216 0.012253947238252233 1.6192398312152196e-10 9.790688821623759 -0.11783050880292889 AAQMHS(ph)GYQR ddPTM_A549_MK2206_60min_R1 2 AAQMHSGYQR 10 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 AAQMHS(0.981)GY(0.019)QR;AAQMHS(0.953)GY(0.047)QR 48.568000000000005 0.007540300000000001 3876900.0 459.74 565.04 526.23 348.83 563.39 204.201 398.0 307.7 731.72 902.75 871.9300000000001 True False 537.3328724361547 593.7981225190267 600.8573268612072 434.2933656595736 480.51607731822 225.80941428234655 470.31144820455455 351.3174172917292 565.9865883167331 698.8181480128958 655.405716956221 0.819847704306868 0.906000828428371 0.9167715680779491 0.6626328614838479 0.7331582024486932 0.3445337879123656 0.7175882602744673 0.5360304437429801 0.8635667551776012 1.06623749218772 1.0 9.356244447013678 -9.045816262291769 3.2227883464375733 0.9464719789626312 0.7059941469922155 0.36294609853661486 0.16008151159412437 0.21324826757052964 4.596871872704929 0.031201774799825083 0.031102772422090048 8.998782140199305e-10 9.045816262291769 -0.24047783197041572 AAQMHS(ph)GYQR ddPTM_A549_PD325901_60min_R1 2 AAQMHSGYQR 10 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 AAQMHS(0.991)GY(0.009)QR;AAQMHS(0.981)GY(0.019)QR 45.257 0.011696 6483500.0 1570.49 1591.68 1193.29 1393.98 1569.17 1794.04 1106.21 1217.12 1708.49 1681.98 2185.61 True False 1729.9249886663672 1725.816459601445 1274.2738352356964 1480.08297864172 1458.9569125426221 1779.4299330520669 1148.3074268913394 1192.8435867878316 1636.6881067340157 1575.779495751497 1916.7938257233122 0.9025096833320458 0.9003662451543004 0.6647944177067883 0.7721659777796931 0.7611444136367025 0.9283366365084099 0.5990771732885876 0.6223118891452531 0.8538675807328432 0.8220912831649322 1.0 10.904479450774595 -9.628738585492078 1.2047618202188808 0.969292269650813 0.7724775105193076 0.1298693835008644 0.11694311618321251 0.32231516141837135 0.9593345972342513 0.030271451309581077 0.021663205710499556 2.351047559076074e-10 9.628738585492078 -0.19681475913150548 AAQQAASSSGQGQQAQT(ph)PTGF ddPTM_A549_MK2206_60min_R1 1 AAQQAASSSGQGQQAQTPTGF 21 0 D6REM4;E7ETM0;A0A5F9W493;P48729-3 D6REM4 CSNK1A1 Casein kinase I isoform alpha 1 AAQQAASSSGQGQQAQT(0.997)PT(0.003)GF 154.49 2.5074e-27 5408300.0 830.55 763.43 796.76 809.62 1130.0 906.02 892.1 793.84 962.25 1146.3 1568.4 True False 970.726535002063 802.2853261268242 909.7525487903301 1007.9769363452227 963.7784969019482 1001.8944350325984 1054.18302247056 906.3692510330397 744.3019113974972 887.3500338600744 1178.9229943620899 0.8234011378557586 0.6805239442809726 0.7716810624111996 0.8549981136729246 0.8175075908358582 0.8498387424996483 0.8941915863138914 0.7688112415887454 0.6313405667350103 0.7526785363451288 1.0 10.203253771189972 -11.079191073558414 1.4182336316478712 0.9993177647904327 0.7714438423491747 0.0 0.10303054142794425 0.2962114509767891 1.0690917966695759 0.06323199041119332 0.014096917640989772 8.333144763134847e-12 11.079191073558414 -0.22787392244125793 AAQQAASSSGQGQQAQT(ph)PTGK ddPTM_A549_MK2206_60min_R1 4 AAQQAASSSGQGQQAQTPTGK 21 0 H0Y9X2;U3KQK7;U3KPX3;A0A590UJ43;P48729;P48729-2 H0Y9X2 CSNK1A1 Casein kinase I isoform alpha 1 AAQQAASSSGQGQQAQT(0.992)PT(0.008)GK;AAQQAASSSGQGQQAQT(0.978)PT(0.022)GK;AAQQAASSSGQGQQAQT(1)PTGK;AAQQAASSSGQGQQAQT(0.953)PT(0.047)GK 209.66 4.9923999999999994e-67 21387500.0 2129.62 2869.15 2204.21 1454.16 3404.08 2197.85 2225.91 2602.0099999999998 3501.5699999999997 3698.38 3422.9900000000002 True False 2489.0477917898897 3015.177479869506 2516.8001224573686 1810.4292652797235 2903.344341357507 2430.425028185245 2630.329034354271 2970.852885821424 2708.469985858282 2862.9133893635385 2572.967113282002 0.9673842230400421 1.1718678658210415 0.9781703425066368 0.7036348253088989 1.1284032066986216 0.9446001138681736 1.0222940747187006 1.1546408310022627 1.0526640515056707 1.1126894605783317 1.0 11.329217301854989 -7.983200388976073 22.893245772864258 1.0378288145430647 0.9846313043408125 0.09086153592244106 0.11966957543111013 260.47765893227177 354954.81644513336 0.01820313666362332 0.025146019438953844 1.0394404441730235e-08 7.983200388976073 -0.053197510202252274 AAQQAASSSGQGQQAQT(ph)PTGK ddPTM_A549_PD325901_60min_R1 3 AAQQAASSSGQGQQAQTPTGK 21 0 H0Y9X2;U3KQK7;U3KPX3;A0A590UJ43;P48729;P48729-2 H0Y9X2 CSNK1A1 Casein kinase I isoform alpha 1 AAQQAASSSGQGQQAQT(0.988)PT(0.012)GK;AAQQAASSSGQGQQAQT(0.998)PT(0.002)GK;AAQQAASSSGQGQQAQT(0.995)PT(0.005)GK 268.25 6.7548e-112 31047400.0 5391.7 5068.9 5596.7 4390.7 5836.599999999999 5166.5 6150.0 5395.3 6153.3 5583.799999999999 5735.4 True False 5939.061414840247 5496.073992306098 5976.525717691109 4661.903566996802 5426.657351176905 5124.4257369476145 6384.041615409133 5287.68650896903 5894.698199677155 5231.237915062729 5029.982159696139 1.1807321032723157 1.0926627208232713 1.1881803012303627 0.9268230818692261 1.078862146800284 1.0187761256905095 1.269197665662256 1.0512336507548286 1.1719123473060693 1.040011226476944 1.0 12.296337567761766 -11.031196399819093 1.330071262351562 1.0001232196773167 1.1123435187153634 0.12251615845351527 0.08956103304089764 0.6109405911099379 1.9293488557200698 0.06116000348266836 0.013812594466095366 9.306868982671581e-12 11.031196399819093 0.11222029903804676 AAQQQQPS(ph)ASPR ddPTM_A549_PD325901_60min_R1 1 AAQQQQPSASPR 12 0 Q86U86-8;Q86U86 Q86U86-8 PBRM1 Protein polybromo-1 1 AAQQQQPS(0.5)AS(0.5)PR 97.214 0.00025438 3989100.0 352.21 346.45 363.64 181.27 334.4 309.6 305.2 395.95 150.97 355.18 408.72 True False 387.96609991670215 375.6465573663807 388.31879714495943 192.46663620596044 310.9128976173725 307.07872024755295 316.8145530118484 388.05246663323373 144.62525591231702 332.75387418460207 358.4500310895501 1.0823436079428828 1.047974682062545 1.0833275588360802 0.5369413293700546 0.867381421818592 0.8566848754738613 0.8838457958808208 1.0825845528697644 0.4034739667136083 0.9283131408111708 1.0 8.485628207101248 -6.231098521444493 23.880507233582406 0.7613453891798331 1.0688913895404288 0.2151186742893334 0.19131708895659105 450.45513453192746 354540.1981633164 0.03361810341019035 0.08892873881309349 5.87356093330421e-07 6.231098521444493 0.30754600036059576 AAQQQQPSAS(ph)PR ddPTM_A549_MK2206_60min_R1 4 AAQQQQPSASPR 12 0 Q86U86-8;Q86U86 Q86U86-8 PBRM1 Protein polybromo-1 1 AAQQQQPS(0.02)AS(0.98)PR;AAQQQQPS(0.094)AS(0.906)PR;AAQQQQPS(0.439)AS(0.561)PR;AAQQQQPS(0.468)AS(0.532)PR 97.214 0.00025438 31453600.0 1126.42 1472.75 1426.96 1207.99 1256.75 1059.6399999999999 965.16 1015.94 1463.5099999999998 1435.48 1724.12 True False 1316.5321576750641 1547.7066843761452 1629.3243850367096 1503.947604228731 1071.883739806658 1171.770401467895 1140.5170787666025 1159.9526061857632 1132.0273217452325 1111.2040710158417 1295.9734207087265 1.015863548308803 1.1942426130388952 1.2572205255148552 1.160477198217746 0.8270877493926372 0.904162371499171 0.8800466587832412 0.8950435152839957 0.87349578599086 0.8574281333703276 1.0 10.339820414763539 -6.746103317714403 24.73718609976247 0.9215614972873516 1.1667768859616672 0.7556116387838583 0.0713376466457713 91.30394314053902 147272.96595708546 0.011019065960407585 0.022868539098020692 1.7943067143818082e-07 6.746103317714403 0.24521538867431558 AAQQQQPSAS(ph)PR ddPTM_A549_PD325901_60min_R1 3 AAQQQQPSASPR 12 0 Q86U86-8;Q86U86 Q86U86-8 PBRM1 Protein polybromo-1 1 AAQQQQPS(0.002)AS(0.998)PR;AAQQQQPSAS(1)PR;AAQQQQPS(0.034)AS(0.966)PR 213.06 1.4077999999999998e-31 35407900.0 2082.8900000000003 2293.0099999999998 1988.4099999999999 2229.1400000000003 2597.4700000000003 2344.9500000000003 2572.61 2516.6499999999996 2644.81 2221.59 2478.75 True False 2294.343459457426 2486.250000019294 2123.355459880675 2366.8289150557425 2415.0326679850373 2325.8535046656934 2670.51208133621 2466.4534414762666 2533.657833274524 2081.3184282610796 2173.8794640908754 1.0554142938265112 1.1436926660784539 0.9767585990645853 1.0887581184477306 1.1109321873073643 1.0699091385171966 1.2284545327599514 1.1345861084840536 1.165500606232604 0.9574212658251017 1.0 11.086056233592485 -6.501569283597024 24.20198723074629 1.097098097955281 1.0614005180908357 0.039875440790306915 0.07814853782472876 1647.8787455752597 1871559.5942453968 0.011413660971018997 0.026250967319562696 3.150871677207512e-07 6.501569283597024 -0.03569757986444522 AARKS(ph)APATGGVK ddPTM_A549_MK2206_60min_R1 2 AARKSAPATGGVK 13 2 P68431;Q71DI3;Q5TEC6 P68431;Q5TEC6 HIST1H3A;HIST2H3A;HIST2H3PS2 Histone H3.1;Histone H3.2;Histone H3 1 AARKS(0.999)APAT(0.001)GGVK;AARKS(1)APATGGVK 78.95 0.00016422 22839000.0 8817.2 11136.1 10444.7 9618.9 13937.5 9552.4 9187.4 6126.4 14822.3 18127.1 15804.599999999999 True False 10305.327800156752 11702.87992387111 11925.915515776845 11975.530931808833 11887.312212894607 10563.228627630064 10856.631656368147 6994.835961313122 11465.072716349301 14032.175520182289 11879.881635230215 0.8674604778549252 0.9851007176002328 1.0038749443774015 1.0080513678095047 1.0006254757322124 0.8891695180113942 0.9138669887225489 0.5887967722312726 0.9650830764465883 1.1811713240112907 1.0 13.536232841520023 -5.244995037097793 21.578858533145045 0.9522552748640957 0.8674600371053351 0.03227689895367725 0.13537776254923986 1361.9236429916375 1786959.234207323 0.016319482571927647 0.480094563514548 5.6885943145049125e-06 5.244995037097793 -0.08479523775876052 AARKS(ph)APATGGVK ddPTM_A549_PD325901_60min_R1 4 AARKSAPATGGVK 13 2 P68431;Q71DI3;Q5TEC6 P68431;Q5TEC6 HIST1H3A;HIST2H3A;HIST2H3PS2 Histone H3.1;Histone H3.2;Histone H3 1 AARKS(1)APATGGVK;AARKS(0.996)APAT(0.004)GGVK;AARKS(1)APATGGVK;AARKS(1)APATGGVK 107.62 1.67e-05 53791000.0 14397.0 14015.3 14238.599999999999 17291.5 18804.1 25392.4 21790.5 21398.4 23984.600000000002 17322.7 20517.300000000003 True False 15858.572841488765 15196.418517699636 15204.917019657412 18359.556683154213 17483.364886623305 25185.612713223378 22619.74940171912 20971.592125279938 22976.61067069324 16228.941765689517 17993.802169880677 0.8813352893272323 0.8445362672229717 0.8450085688453605 1.0203266941483753 0.971632605580616 1.3996826504728874 1.2570855891470056 1.1654897573778875 1.2769180439892325 0.9019184279381869 1.0 14.135212446186038 -6.7208390670224665 1.9227271163362794 1.162344571467648 0.8627639489059677 0.469442222001911 0.13432880977676892 0.22125100920748977 1.660034675334958 0.02033875997423555 0.048838970176220874 1.9017828775957606e-07 6.7208390670224665 -0.29958062256168017 AAS(ph)ADYLRPR ddPTM_A549_MK2206_60min_R1 5 AASADYLRPR 10 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B0QYZ7 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 AAS(1)ADYLRPR;AAS(1)ADYLRPR;AAS(1)ADYLRPR;AAS(1)ADYLRPR;AAS(1)ADYLRPR 126.12 2.5126e-06 92217000.0 9542.400000000001 11419.5 11057.0 9679.6 13704.699999999999 11161.1 10367.9 10066.6 15279.900000000001 14721.8 16119.2 True False 11152.92383071902 12000.70377337185 12625.048862862952 12051.10243453375 11688.756784506313 12342.160193861433 12251.613225728646 11493.571377669556 11819.02704698634 11396.135155265847 12116.35777271193 0.920484855262138 0.9904547223258335 1.041983828778701 0.9946142777060326 0.9647087849148326 1.0186361632253917 1.0111630454922134 0.9485995373589088 0.9754603874115348 0.9405578284368472 1.0 13.564668463430618 -5.262179907436697 8.402131829540298 0.9913969736453608 0.9200418999923228 0.31148851486232 0.028855088159354513 0.0657083227987119 70.06045136317046 0.003367612390660011 0.027022717774032864 5.467894072666532e-06 5.262179907436697 -0.07135507365303806 AAS(ph)ADYLRPR ddPTM_A549_PD325901_60min_R1 2 AASADYLRPR 10 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B0QYZ7 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 AAS(1)ADYLRPR;AAS(1)ADYLRPR 102.97 0.00010721 145103000.0 7403.4 6772.4 7279.9 7418.2 9089.7 7270.2 6697.6 7860.7 8157.799999999999 7830.3 8467.8 True False 8154.987717904981 7343.133915739864 7773.957791594963 7876.40536604543 8451.270829762658 7210.9939016271255 6952.480833067348 7703.9121719001405 7814.956035513678 7335.893521672641 7426.314281806847 1.098120468437924 0.9887992397156204 1.0468123885680116 1.0606075998347155 1.1380168558805506 0.9710057544013161 0.9361953412205692 1.0373803046247798 1.0523330603794852 0.9878242750437157 1.0 12.858430656037049 -7.293272282524942 24.99345543616015 1.0156107319314946 1.060738327012252 0.31243790969957996 0.04658639917650147 913.5280284464332 717250.1974673355 0.007344674469669611 0.011741663787616454 5.0901164427237396e-08 7.293272282524942 0.045127595080757255 AAS(ph)AGQEPLHNEELAGAGR ddPTM_A549_MK2206_60min_R1 2 AASAGQEPLHNEELAGAGR 19 0 A0A0A0MRX2;Q96HY6-2;Q96HY6 A0A0A0MRX2 DDRGK1 DDRGK domain-containing protein 1 1 AAS(1)AGQEPLHNEELAGAGR;AAS(1)AGQEPLHNEELAGAGR 83.60600000000001 4.0598e-05 3366600.0 809.4300000000001 642.8000000000001 498.97 496.86 878.48 774.97 513.99 691.38 943.76 1087.49 990.28 True False 946.0419953364881 675.5157743792133 569.7314489556593 618.5907223048928 749.2567557154191 856.9768110165478 607.3753298056758 789.3852322624493 729.999866875034 841.825253705393 744.3661456623889 1.2709363541710161 0.9075046982128563 0.7653914035124105 0.8310301669542314 1.0065701672241933 1.1512839696033597 0.8159631296305004 1.0604797610186842 0.9806999836423634 1.1309289905390285 1.0 9.539868631797741 AAS(ph)AGQEPLHNEELAGAGR ddPTM_A549_PD325901_60min_R1 2 AASAGQEPLHNEELAGAGR 19 0 A0A0A0MRX2;Q96HY6-2;Q96HY6 A0A0A0MRX2 DDRGK1 DDRGK domain-containing protein 1 1 AAS(1)AGQEPLHNEELAGAGR;AAS(1)AGQEPLHNEELAGAGR 88.836 1.6285e-07 2018200.0 264.21 249.3 377.63 274.6 325.92 321.74 324.65 296.64 419.13 491.68 427.7 True False 291.03240469887817 270.30938591842624 403.2582426736636 291.56141833815155 303.02850356296074 319.1198561125572 337.00473340529663 290.7232824904217 401.51542366383666 460.6352408893665 375.09561141368306 0.7758885890507159 0.7206412916953836 1.0750812070390252 0.7772989325022951 0.8078700319123664 0.8507693676016069 0.898450216826512 0.775064473281162 1.0704348743259913 1.228047534742666 1.0 8.551114573465245 -8.766279202905295 24.9997717732131 1.0332609223331328 0.8391101089371394 0.5234932266085158 0.10732272134728923 70.90128627180042 366234.7428004705 0.015117804483179268 0.016344997131110456 1.712855778273806e-09 8.766279202905295 -0.19415081339599338 AAS(ph)APAKESPRKGAAPAPPR ddPTM_A549_MK2206_60min_R1 1 AASAPAKESPRKGAAPAPPR 20 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AAS(0.622)APAKES(0.378)PRKGAAPAPPR 42.041000000000004 0.013129 13340000.0 1336.1 1530.9 1356.5 1406.5 1890.9 888.53 1058.8 914.91 1990.1 2199.4 2108.3 True False 1561.6010154912478 1608.8162709974124 1548.872097537631 1751.0925631401842 1612.751114860084 982.5536548415204 1251.1702546708088 1044.601294294364 1539.3455275366673 1702.5540124503596 1584.7509238801279 0.9853920839924803 1.0151855706500317 0.977359958715373 1.1049639011112125 1.0176685121668205 0.6200050998776648 0.7895059317002479 0.6591580282766117 0.9713485597898948 1.0743353966829063 1.0 10.630040393720549 -7.052103170372091 24.99996048179396 0.9155323978839405 1.0227440694261112 0.1973650228375552 0.13970345336537282 629.984761922851 302275.9160865235 0.022813296971329097 0.03951408009877714 8.869452855634517e-08 7.052103170372091 0.1072116715421707 AAS(ph)APAKGTPGKGATPAPPGK ddPTM_A549_MK2206_60min_R1 1 AASAPAKGTPGKGATPAPPGK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AAS(0.427)APAKGT(0.379)PGKGAT(0.194)PAPPGK 40.669000000000004 0.018369 30785000.0 1433.1 1535.0 1137.5 1370.4 1771.3 1202.3 1283.3 823.46 1827.4 2017.5 2050.0 True False 1674.972244068939 1613.1249434848974 1298.8146044593113 1706.1480615195933 1510.7441164269205 1329.5265879778517 1516.4589986957405 940.1879767404846 1413.4968177581563 1561.745348785397 1540.928422878274 1.086988999099833 1.0468526114092753 0.8428779592716433 1.107220839195573 0.9804116102972695 0.86280878997251 0.9841203369220568 0.6101438345749528 0.9173020607394013 1.013509339952494 1.0 10.589584133953554 -7.008323847148612 24.275522975901914 0.926402808065047 1.014324010785288 0.16380400378541604 0.1224165944057627 516.522636457283 1506388.6231311227 0.017996401762376477 0.03288819649467174 9.810161405807361e-08 7.008323847148612 0.08792120272024095 AAS(ph)DDGS(ph)LK ddPTM_A549_MK2206_60min_R1 3 AASDDGSLK 9 0 A0A1B0GV45;Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 A0A1B0GV45;Q92614 MYO18A Unconventional myosin-XVIIIa 2 AAS(1)DDGS(1)LK;AAS(1)DDGS(1)LK;AAS(1)DDGS(1)LK 56.93600000000001 0.01674 12585900.0 3894.31 3639.8 3360.81 3591.11 5097.67 3895.51 3466.39 4147.3099999999995 4776.57 5171.37 5721.4 True False 4551.574321261676 3825.0502731572155 3837.423394121227 4470.932111211052 4347.809495842613 4307.7302825697425 4096.188193321068 4735.203893104195 3694.684521614905 4003.153925327553 4300.618477393051 1.0583534310676053 0.8894186483326195 0.8922957045116442 1.0396021257670924 1.0109730771742784 1.0016536703299947 0.9524649105363319 1.1010518412632087 0.8591053917097405 0.9308321457415552 1.0 12.07032843519897 -8.793438484595558 24.999667015638238 0.9334664761718752 0.9874618189235043 0.14116768877688024 0.06826301215942453 356.5954751325298 278592.78380740096 0.01336041441263706 0.014223779408951373 1.6090202705450513e-09 8.793438484595558 0.053995342751629094 AAS(ph)DDGS(ph)LK ddPTM_A549_PD325901_60min_R1 3 AASDDGSLK 9 0 A0A1B0GV45;Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 A0A1B0GV45;Q92614 MYO18A Unconventional myosin-XVIIIa 2 AAS(1)DDGS(1)LK;AAS(1)DDGS(1)LK;AAS(1)DDGS(1)LK 55.401 0.020442 15125900.0 5995.610000000001 6309.32 5821.46 6292.63 7316.02 6467.77 5719.97 6275.77 6624.63 7053.950000000001 8714.0 True False 6604.2799134652005 6841.028538960467 6216.5392828827835 6681.311463500375 6802.167994098834 6415.098625502309 5937.6465884376885 6150.594844103675 6346.219838871385 6608.562393165359 7642.233242597231 0.8641819352821428 0.8951609198249918 0.813445374610168 0.8742616525048267 0.8900759474578797 0.8394272226271549 0.7769517626525313 0.8048164258872295 0.8304143091966933 0.8647423054729253 1.0 12.899778574391442 -10.63255784239765 0.8994777691271308 1.000384785589324 0.8432059803315693 0.15801467826805593 0.05204594225701052 0.25857980389962276 0.37168462982547185 0.02631461046759909 0.007041861307031056 2.330462707176132e-11 10.63255784239765 -0.15717880525775463 AAS(ph)DDGSLK ddPTM_A549_MK2206_60min_R1 2 AASDDGSLK 9 0 A0A1B0GV45;Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 A0A1B0GV45;Q92614 MYO18A Unconventional myosin-XVIIIa 1 AAS(0.992)DDGS(0.008)LK;AAS(1)DDGSLK 122.77 0.00010911 42162000.0 8653.2 10861.4 8506.5 8418.2 11005.8 8005.8 8559.8 9646.0 12767.1 13599.9 13366.3 True False 10113.648609571794 11414.198867209678 9712.849611281876 10480.659377907365 9386.861399295098 8852.968442180061 10115.004860154133 11013.350039636067 9875.372234869292 10527.673144459239 10047.078818886768 1.0066257856522323 1.1360713967678804 0.9667336930833468 1.0431548877874373 0.9342876241449827 0.8811485011482157 1.0067607751956396 1.0961743446197392 0.9829098002401755 1.047834234630372 1.0 13.294488479350738 -5.780792101568506 24.995688975722743 0.9906446973227973 1.0713486431630108 0.18111987909291105 0.061560702103676083 226.88294170355283 293039.16453988414 0.007891130899406698 0.02458373043478808 1.6565627766375482e-06 5.780792101568506 0.08070394584021356 AAS(ph)DSNPAGPLR ddPTM_A549_MK2206_60min_R1 1 AASDSNPAGPLR 12 0 Q9BUU2-2;Q9BUU2 Q9BUU2-2 METTL22 Methyltransferase-like protein 22 1 AAS(0.999)DS(0.001)NPAGPLR 104.59 0.00017622 14498000.0 1860.2 1878.7 1405.9 1727.7 1963.3 1655.1 1680.7 2205.3 2466.7 2434.4 3040.0 True False 2174.1562824764765 1974.317805423503 1605.277760359863 2150.986577559401 1674.5011707677827 1830.2415834335375 1986.0614346668208 2517.9080284480006 1907.996388510476 1884.4673492357724 2285.0841002682673 0.9514556957537064 0.8640022505918795 0.7025027044612513 0.9413161543187303 0.732796298644412 0.8009515199981779 0.869141505309874 1.1018885598794372 0.8349786287018839 0.8246818351300669 1.0 11.158031547891692 -8.008870170156547 24.563155682352523 0.935864547884412 0.8287409988365281 0.20416227195849967 0.09959283427333471 419.033277680897 1160384.244317415 0.015666795412676432 0.02105877061240577 9.797828420914131e-09 8.008870170156547 -0.1071235490478839 AAS(ph)DSNPAGPLR ddPTM_A549_PD325901_60min_R1 2 AASDSNPAGPLR 12 0 Q9BUU2-2;Q9BUU2 Q9BUU2-2 METTL22 Methyltransferase-like protein 22 1 AAS(0.991)DS(0.009)NPAGPLR;AAS(0.978)DS(0.022)NPAGPLR 96.37100000000001 0.00025663 34287000.0 9695.0 9597.8 7628.200000000001 9097.5 9247.5 8736.1 7641.1 8167.0 8717.900000000001 9973.5 10315.7 True False 10679.229262918216 10406.64028948203 8145.895524093007 9659.43191307842 8597.987502143098 8664.95609804472 7931.886241870361 8004.102778112448 8351.516980313892 9343.771507911848 9046.934296610087 1.1804252040295855 1.1502946687013553 0.9004039663629809 1.0677022288862912 0.9503758091141206 0.9577781615250047 0.8767485185387566 0.8847309503631091 0.9231322685125757 1.0328108065748844 1.0 13.143213278584446 -5.725177031834703 8.7643985901549 0.9544647525154414 1.1667497117480152 0.6663424382600581 0.05745600263047788 0.11893022591765309 25.805335146330957 0.007667865705698953 0.029445780538810872 1.8828814124598382e-06 5.725177031834703 0.21228495923257384 AAS(ph)DTERDGLAPEK ddPTM_A549_PD325901_60min_R1 1 AASDTERDGLAPEK 14 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 AAS(0.881)DT(0.119)ERDGLAPEK 92.897 1.6621e-05 66425000.0 8184.3 7488.0 7517.3 7578.2 8251.4 9139.1 7768.6 9067.0 9381.1 9137.8 9943.2 True False 9015.164111036776 8119.040039138287 8027.469183197131 8046.288202659067 7671.850129784656 9064.67419965895 8064.238324141035 8886.151572076102 8986.844990654014 8560.837748533297 8720.249435138026 1.033819522949699 0.9310559404898235 0.9205549959214063 0.9227130786232731 0.8797741609169032 1.0394971229989216 0.9247715199116197 1.0190249302123833 1.0305720102961444 0.9817193661958356 1.0 13.090153687289275 -8.272067450586167 24.412864332825844 1.015184276638337 0.9480828588301936 0.25230620577259333 0.0469140040050038 444.8691777648535 1021870.0386574765 0.007275423501185364 0.008844989343106558 5.344813422714072e-09 8.272067450586167 -0.06710141780814338 AAS(ph)DTERDGLAPEKT(ph)SPDRDK ddPTM_A549_MK2206_60min_R1 3 AASDTERDGLAPEKTSPDRDK 21 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 2 AAS(0.966)DT(0.045)ERDGLAPEKT(0.515)S(0.475)PDRDK;AAS(0.996)DT(0.004)ERDGLAPEKT(0.536)S(0.464)PDRDK;AAS(0.991)DT(0.009)ERDGLAPEKT(0.524)S(0.476)PDRDK 101.93 6.246199999999999e-09 60255200.0 10353.61 10550.060000000001 8368.130000000001 9147.99 12230.8 9837.630000000001 8633.060000000001 10523.3 12226.1 14539.6 14161.599999999999 True False 12101.046246538699 11087.012991050346 9554.85666462777 11389.24796066887 10431.665522042784 10878.641476909717 10201.57525386133 12015.010001254637 9456.907871069821 11255.094261809249 10644.883879723391 1.1367945750530015 1.0415344231390942 0.8976008355364093 1.0699269329150092 0.9799698747220014 1.0219596192713378 0.9583547710927609 1.1287121716885133 0.8883993454436405 1.057324287327192 1.0 13.377872591710634 -8.787192403183667 24.999925516465627 0.9472997055994645 1.0224636085790506 0.013851575416687023 0.0779483774888062 280.24274208270515 272046.35258506506 0.012677175061801485 0.013498150399978134 1.632328625777473e-09 8.787192403183667 0.07516390297958608 AAS(ph)DTERDGLAPEKT(ph)SPDRDK ddPTM_A549_PD325901_60min_R1 2 AASDTERDGLAPEKTSPDRDK 21 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 2 AAS(1)DTERDGLAPEKT(0.537)S(0.463)PDRDK;AAS(0.997)DT(0.003)ERDGLAPEKT(0.532)S(0.468)PDRDK 107.45 3.3111000000000003e-09 116540000.0 11159.5 11538.599999999999 13078.0 10880.4 13796.6 11814.7 11826.0 12366.2 13205.2 13569.3 13877.0 True False 12292.404224810298 12510.998316720215 13965.551724402652 11552.457596818736 12827.57441168614 11718.485000351307 12276.044901435507 12119.546439903777 12650.231366319978 12712.532082248781 12170.216973550812 1.0100398580834697 1.0280012545306312 1.1475187134915992 0.9492400687617456 1.0540136169769154 0.9628821758740012 1.0086956484107628 0.9958365135348732 1.0394417284270583 1.044560841427607 1.0 13.571067268544015 -6.283963000376315 24.998519001739826 1.0114889882036904 1.0584681148623474 0.22922886092676098 0.044219841903298494 907.7122622172286 1007450.9810386273 0.005726845867315754 0.01331634650386764 5.200402993662105e-07 6.283963000376315 0.046979126658657 AAS(ph)EDMTSDEER ddPTM_A549_MK2206_60min_R1 2 AASEDMTSDEER 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AAS(0.943)EDMT(0.047)S(0.01)DEER;AAS(0.877)EDMT(0.111)S(0.012)DEER 79.492 0.00031893 7426600.0 821.44 1068.04 663.02 617.96 1114.3400000000001 1077.35 728.65 823.0799999999999 1546.54 1317.75 1329.4299999999998 True False 960.0789897201794 1122.398674032319 757.0462057570217 769.360227741279 950.4220621572723 1191.3544619129489 861.0362732016295 939.754110576784 1196.251159316897 1020.0693597828778 999.2958405985673 0.9607555147483677 1.1231895785336345 0.7575796625987747 0.7699023617274746 0.9510917823774587 1.1921939564957464 0.8616430072258462 0.9404163135652416 1.1970941043848993 1.0207881573607545 1.0 9.964768039544362 -8.732506820638038 24.520688059186767 1.0930722143752487 0.9441971615549781 0.15329555277631712 0.13163470603222657 209.92285295629947 177911.8621933282 0.024002333121409283 0.027213526142441536 1.8513698180297993e-09 8.732506820638038 -0.14887505282027058 AAS(ph)EDMTSDEER ddPTM_A549_PD325901_60min_R1 1 AASEDMTSDEER 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AAS(0.956)EDMT(0.039)S(0.005)DEER 74.46 0.00046986 2532000.0 394.08 415.24 305.2 375.56 479.3 478.12 440.47 494.42 419.04 665.58 780.32 True False 434.08671149363704 450.233732084907 325.9127073166915 398.7574882413552 445.6356214952352 474.22634924018064 457.23232688443255 484.55840523501365 401.4292060508533 623.5551652114066 684.3455868560329 0.6343092142785407 0.6579040483819523 0.47623994890355653 0.5826843862226039 0.6511850592074973 0.6929632605929912 0.6681307451473657 0.7080609775846354 0.5865884339154841 0.9111699953763055 1.0 9.418581243737417 -10.982970912085928 0.5780566874326674 1.0955699097392853 0.6189012011519569 0.7822687038434887 0.06588938648936392 0.4703700817398352 0.18875404384007383 0.1253302670237811 0.013944636270208447 1.0399898193077731e-11 10.982970912085928 -0.47666870858732835 AAS(ph)EELLEK ddPTM_A549_MK2206_60min_R1 2 AASEELLEK 9 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AAS(1)EELLEK;AAS(1)EELLEK 145.46 3.1932e-05 65891000.0 3006.5 3976.3 3015.7 2434.8 4570.2 3295.6 2773.6 3535.5 4676.6 4540.1 4645.7 True False 3513.9236981322065 4178.676685849511 3443.371606741049 3031.326109302327 3897.929634107333 3644.338204557772 3277.527217940081 4036.6679520146513 3617.3575669956203 3514.488256763609 3492.044475202728 1.0062654479588804 1.1966275674673135 0.9860617844912032 0.8680662949249367 1.1162313830155448 1.0436116236309398 0.9385697236143611 1.1559612085926556 1.0358853080717472 1.0064271179019215 1.0 11.769856218127096 AAS(ph)EELLEK ddPTM_A549_PD325901_60min_R1 2 AASEELLEK 9 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AAS(1)EELLEK;AAS(1)EELLEK 157.38 1.198e-05 117893000.0 5971.3 6618.9 5842.0 6048.799999999999 7352.5 6983.2 6435.2 6247.799999999999 6951.8 5520.8 6636.299999999999 True False 6577.5019801612725 7176.697932031574 6238.473250799842 6422.420638178477 6836.085764748002 6926.331134472585 6680.095057476561 6123.1827276957165 6659.640021535701 5172.215745814379 5820.077170971769 1.130139994185513 1.2330932599701754 1.07188840758244 1.10349406880908 1.1745696086030748 1.1900754802734181 1.147767436967025 1.0520793020126464 1.144252872582401 0.8886850799180697 1.0 12.506822567252717 -11.657718499519426 0.3436041737890056 0.8824022318051532 1.1507990783089792 0.6050099800777383 0.05815082299503822 3.1905711725342134 0.2894021484173339 0.3481519188367881 0.016745259546143462 2.199284940781788e-12 11.657718499519426 0.268396846503826 AAS(ph)GEAKPK ddPTM_A549_PD325901_60min_R1 2 AASGEAKPK 9 1 P10412;P16403;P16401 P10412;P16403;P16401 HIST1H1E;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.2;Histone H1.5 1 AAS(1)GEAKPK;AAS(1)GEAKPK 57.836000000000006 0.0035275999999999997 9528800.0 7437.5 6817.299999999999 5818.0 5588.1 6567.9 5774.6 4494.7 5750.8 6841.0 7834.0 9898.3 True False 8192.54952480188 7391.817796316434 6212.844466476118 5933.264245504094 6106.593362024945 5727.573572162527 4665.748268094215 5636.095782584673 6553.496560218326 7339.359903041199 8680.87185049348 0.9437473177692582 0.8515063836469643 0.7156936046836053 0.6834871367403963 0.7034539234302606 0.6597924345395022 0.5374746164268029 0.6492545771499066 0.7549352960262603 0.8454634545289341 1.0 13.083624229545881 -10.221091979211883 0.8570073393958814 0.9857727556107009 0.7163389783643056 0.30536984071284534 0.1095025292936907 0.37180920018153907 0.5329019483344272 0.05480331010669496 0.021728420812922113 6.010464284020418e-11 10.221091979211883 -0.2694337772463953 AAS(ph)GFNAMEDAQTLR ddPTM_A549_MK2206_60min_R1 4 AASGFNAMEDAQTLR 15 0 Q6P452;P09525;B4E1S2 Q6P452 ANXA4 Annexin;Annexin A4 1 AAS(1)GFNAMEDAQTLR;AAS(1)GFNAMEDAQTLR;AAS(1)GFNAMEDAQTLR;AAS(1)GFNAMEDAQTLR 124.29 2.5035e-07 17131200.0 10316.500000000002 10964.7 8153.500000000001 8712.199999999999 11867.199999999999 10850.7 9324.3 10242.9 12526.0 12982.199999999999 13481.900000000001 True False 12057.672985791085 11522.756395979706 9309.788903260647 10846.689391105512 10121.550600384775 11998.91387188828 11018.404614305844 11694.862442565654 9688.880999911717 10049.512003470521 10133.972148489065 1.1898269315441958 1.1370424377668833 0.9186712541585877 1.0703295047759442 0.9987742666032349 1.1840287003035894 1.0872740178142926 1.1540255164712794 0.956079300193882 0.9916656426738714 1.0 13.306912148524326 -8.776339309334807 24.99732030241207 0.9792596615622783 1.0872012726616196 0.28814086264760763 0.07656546868089245 218.86362947806757 367181.8311717446 0.013351756478107839 0.014242343252679143 1.6736347732939729e-09 8.776339309334807 0.1079416110993413 AAS(ph)GFNAMEDAQTLR ddPTM_A549_PD325901_60min_R1 4 AASGFNAMEDAQTLR 15 0 Q6P452;P09525;B4E1S2 Q6P452 ANXA4 Annexin;Annexin A4 1 AAS(0.893)GFNAMEDAQT(0.107)LR;AAS(0.978)GFNAMEDAQT(0.022)LR;AAS(0.999)GFNAMEDAQT(0.001)LR;AAS(1)GFNAMEDAQTLR 119.68 6.5205e-07 27727600.0 12395.099999999999 13575.5 14547.599999999999 16100.5 15043.8 14463.2 13350.4 15393.300000000001 13878.7 15971.3 16416.2 True False 13653.44142720966 14719.555028221388 15534.887617825354 17094.991318111457 13987.175386292554 14345.416494458674 13858.456777619202 15086.268555689756 13295.426503479324 14962.86939232089 14397.11147086581 0.9483458855506501 1.0223964062519124 1.0790280848531293 1.1873903562325758 0.9715265047851572 0.996409350826258 0.9625859191035204 1.047867732789215 0.9234787499134205 1.039296627146352 1.0 13.813491768670227 -6.905451848006703 21.820426628601354 0.9723690030418802 1.060743519076183 0.16930852873286972 0.06359443767534455 6.060851752439803 1392.5070913831983 0.009069934111546354 0.01714056716833992 1.2432204691067395e-07 6.905451848006703 0.08837451603430269 AAS(ph)GGSGSENVGPPAAAVPGPLSR ddPTM_A549_PD325901_60min_R1 1 AASGGSGSENVGPPAAAVPGPLSR 24 0 Q9UL54-2 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 AAS(0.94)GGS(0.049)GS(0.011)ENVGPPAAAVPGPLSR 113.73 1.1541999999999999e-15 3415100.0 1455.1 1460.7 1274.2 1522.7 1405.0 1380.5 1450.5 1728.9 1531.4 1527.8 1517.3 True False 1602.8206808119965 1583.7983153270968 1360.6748743870521 1616.753720697391 1306.3176469868674 1369.2576657033155 1505.699571244056 1694.4157332041882 1467.040583586953 1431.3344472640204 1330.68171895717 1.2045109344916052 1.1902157313533168 1.0225396914999232 1.2149815374065633 0.9816905337894052 1.0289896120135902 1.1315249543099188 1.273344113070156 1.1024729375080353 1.0756399722585277 1.0 10.377949824061526 -10.134674539121962 0.9739698747875232 1.0098132907448152 1.1241662107940227 0.11493605902648674 0.08858143366249357 0.5691384610993298 1.0774405016862834 0.03530487613325205 0.01659593857561513 7.333739186745915e-11 10.134674539121962 0.1143529200492075 AAS(ph)IFGGAKPVDTAAR ddPTM_A549_MK2206_60min_R1 2 AASIFGGAKPVDTAAR 16 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 AAS(1)IFGGAKPVDTAAR;AAS(1)IFGGAKPVDTAAR 77.87100000000001 0.00011102 12384700.0 3756.9 4183.7 4805.200000000001 4880.2 5681.200000000001 4381.200000000001 4977.4 4342.4 6636.9 6958.200000000001 6699.8 True False 4390.972872613631 4396.632459972482 5486.649615250882 6075.849219080506 4845.503005840134 4844.815675994815 5881.729151490826 4957.94849804226 5133.652746951461 5386.3377873202235 5036.054754926757 0.8719072937636263 0.8730311074698444 1.0894737810154485 1.2064700474387262 0.9621624945796695 0.9620260127742152 1.1679239876684717 0.984490586245496 1.0193798512474919 1.0695550484336545 1.0 12.298078253626851 -5.746925581720964 24.539304843311562 1.0291591836934886 0.8724690278162259 0.4137148397609568 0.0785677057492348 148.2175765309795 250594.2444605176 0.010503370451983445 0.04028845896274662 1.7909127085524682e-06 5.746925581720964 -0.15669015587726265 AAS(ph)IFGGAKPVDTAAR ddPTM_A549_PD325901_60min_R1 2 AASIFGGAKPVDTAAR 16 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 AAS(1)IFGGAKPVDTAAR;AAS(1)IFGGAKPVDTAAR 108.96 1.6550999999999998e-07 33980000.0 7659.9 7883.6 8203.5 11268.2 9153.8 9597.9 8653.0 9634.8 11299.2 10115.099999999999 8682.3 True False 8437.52740907966 8547.978639496601 8760.23884165294 11964.21112206103 8510.868666895654 9519.737884573602 8982.294650103284 9442.626355645614 10824.33391802645 9476.430859746231 7614.432141634377 1.108096736845909 1.1226022480071436 1.1504782863259746 1.5712545465659644 1.1177286117450203 1.2502229591779206 1.1796407772799857 1.240095936243885 1.421554978320825 1.2445354667921686 1.0 12.894520734113256 -11.07806842246565 1.4157743821685986 1.0007607629161275 1.261681128835615 0.0 0.1533207743402236 0.4124954462800701 1.4833264763561083 0.1007007288790681 0.02245218546660788 8.354713805577594e-12 11.07806842246565 0.2609203659194874 AAS(ph)KDTISNNR ddPTM_A549_MK2206_60min_R1 3 AASKDTISNNR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AAS(0.998)KDT(0.002)ISNNR;AAS(0.993)KDT(0.002)IS(0.005)NNR;AAS(0.983)KDT(0.017)ISNNR 95.755 7.9151e-05 39345500.0 8619.35 10132.480000000001 8578.63 7271.92 10537.1 8842.69 6935.389999999999 8586.4 11768.1 12237.800000000001 11712.800000000001 True False 10074.085557124841 10648.179952678733 9795.208729892549 9053.540726448897 8987.10654841196 9778.41758649743 8195.460589857747 9803.548494747169 9102.644139794105 9473.27248047878 8804.188503165195 1.1442378310622388 1.2094447942420365 1.1125623589693783 1.0283219996021278 1.020776252709833 1.11065518224445 0.9308592821372913 1.1135096086621379 1.0338992783402596 1.0759960985697936 1.0 13.103974319222573 -6.08822844121104 2.9178691851429974 1.024790993987707 1.1764142027804938 0.5027029458514327 0.05210945954427432 0.12425795805934703 2.0351099965838597 0.006504166607564761 0.020858983415675873 8.161529576280433e-07 6.08822844121104 0.1516232087927869 AAS(ph)KDTISNNR ddPTM_A549_PD325901_60min_R1 4 AASKDTISNNR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AAS(0.85)KDT(0.097)IS(0.053)NNR;AAS(0.982)KDT(0.017)IS(0.001)NNR;AAS(0.898)KDT(0.089)IS(0.013)NNR;AAS(0.972)KDT(0.028)ISNNR 79.492 0.00079635 59143500.0 16140.9 18119.69 16169.009999999998 18315.74 24064.100000000002 24501.500000000004 24369.1 25994.06 22839.51 25290.3 25566.29 True False 17779.512285697445 19646.69986735758 17266.33625075576 19447.061661736396 22373.920632638205 24301.96790744645 25296.479435783196 25475.588081354425 21879.644821235506 23693.46614193039 22421.798408065308 0.7929565667356105 0.8762321161664935 0.7700691950091263 0.8673283609017342 0.9978646772861056 1.0838545358923943 1.1282092085300277 1.136197356595207 0.9758202452380098 1.0567156884885582 1.0 14.452614378047048 -6.710851858682621 3.450647137405146 1.019019561038581 0.8194282041934218 0.7575705389390717 0.060389462801470284 0.11668602686725031 2.8362954386850494 0.010155542370471369 0.021729511760791787 1.9460237726768152e-07 6.710851858682621 -0.19959135684515927 AAS(ph)LDER ddPTM_A549_MK2206_60min_R1 1 AASLDER 7 0 B9ZVR7;Q15772-1;Q15772 B9ZVR7 SPEG Striated muscle preferentially expressed protein kinase 1 AAS(1)LDER 70.256 0.021402 4065000.0 794.26 948.19 1107.0 658.34 1079.3 987.59 709.51 986.75 1049.3 1388.2 1407.9 True False 928.3116702073794 996.4488209530585 1263.9892458342476 819.6333295540059 920.5363997400649 1092.096118290815 838.4187829538025 1126.6248342951374 811.6352253877823 1074.6046558532282 1058.2795739367423 0.8771894431961024 0.941574273465681 1.1943812173679935 0.7744960308597988 0.8698423577389098 1.0319542634922803 0.7922469672498075 1.064581479262757 0.7669383831803004 1.0154260578381546 1.0 10.047505090422803 -6.293937846398004 24.991455245801703 0.8957657122811319 0.9981011994598343 0.07926944614577991 0.12477662859066756 1039.8174799309027 799622.2285004288 0.01765317979609254 0.04102476447696824 5.082321724736007e-07 6.293937846398004 0.10233548717870244 AAS(ph)LDER ddPTM_A549_PD325901_60min_R1 2 AASLDER 7 0 B9ZVR7;Q15772-1;Q15772 B9ZVR7 SPEG Striated muscle preferentially expressed protein kinase 1 AAS(1)LDER;AAS(1)LDER 69.71600000000001 0.021808 5663800.0 1223.0 1120.5 1301.5 1426.2 1446.5 1402.8 1467.4 1497.2 1381.6 1461.0 1706.7 True False 1347.1580596749857 1214.9284673950922 1389.827616555288 1514.2931348647924 1344.902830154096 1391.3760618968574 1523.2427099920903 1467.3371714693212 1323.5361566434208 1368.7522106641795 1496.7867196626917 0.9000334128957093 0.8116911056432158 0.9285408524124883 1.0116959984827003 0.8985266988854473 0.929575365427087 1.017675190447548 0.9803248199583124 0.8842516700987875 0.9144604188983149 1.0 10.54765294800483 -5.916562625807101 6.5300459746129516 0.9516276199340633 0.8571093514786147 0.3898378108998306 0.046996032907984604 0.17882949908194373 11.364823548876448 0.007299400401386201 0.023115916058774284 1.2118179305148533e-06 5.916562625807101 -0.09451826845544864 AAS(ph)LDSVATSR ddPTM_A549_PD325901_60min_R1 1 AASLDSVATSR 11 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 AAS(0.983)LDS(0.017)VATSR 167.84 5.7103000000000005e-15 4685600.0 2574.7 2522.9 2782.9 2373.4 2799.3 2538.9 2723.8 2171.3 2459.4 3376.4 2748.0 True False 2836.081648606038 2735.5136371183203 2971.7643289371567 2519.9995276175127 2602.6868250607386 2518.2240401696126 2827.455699520551 2127.991718148101 2356.0399707938836 3163.213527779972 2410.013421007251 1.1767908111568584 1.1350615781944602 1.233090364988559 1.0456371344871156 1.0799470253460086 1.044900421806421 1.1732115991033911 0.8829791982065889 0.9776045022227264 1.3125294241962875 1.0 11.234825465294374 -7.055038277816374 0.6067984913585087 0.9844434514832734 1.185366239237648 0.0 0.12018871770305833 0.5245664079529317 0.3456993179331634 0.013562768074430359 0.04964447759722744 8.809712226066918e-08 7.055038277816374 0.20092278775437467 AAS(ph)LDTR ddPTM_A549_PD325901_60min_R1 1 AASLDTR 7 0 A0A140LJL2;Q8N350;Q8N350-4 A0A140LJL2;Q8N350-4 DOS Protein Dos 1 AAS(0.999)LDT(0.001)R 68.383 0.022811 2743700.0 1063.4 747.7 893.17 999.25 1324.1 1021.2 837.57 731.7 942.47 1121.0 1209.9 True False 1171.3555851662952 810.7113030533784 953.7858872675265 1060.9714030385944 1231.0997838970181 1012.8836857777803 869.4441846858904 717.1056694924541 902.8612634277101 1050.2198686889426 1061.0899701880185 1.1039173096309056 0.7640363454851292 0.8988737185957206 0.9998882590988933 1.1602218647669198 0.9545690886120654 0.8193878079271923 0.6758198547154183 0.850880970317464 0.9897557211881385 1.0 10.051331272715945 -7.539075634138756 24.302329564194235 0.8967664512772029 0.9779200933462838 0.14849870705663026 0.12713662010337787 385.26169927816017 578056.6691151249 0.02123199364225543 0.03149766979604248 2.8901765026184777e-08 7.539075634138756 0.08115364206908093 AAS(ph)LNYLNQPSAAPLQVSR ddPTM_A549_MK2206_60min_R1 5 AASLNYLNQPSAAPLQVSR 19 0 Q9NSK0;Q9NSK0-3;Q9NSK0-5 Q9NSK0 KLC4 Kinesin light chain 4 1 AAS(1)LNYLNQPSAAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR;AAS(0.993)LNYLNQPS(0.006)AAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR;AAS(0.995)LNY(0.005)LNQPSAAPLQVSR 225.29 9.597199999999997e-75 60364000.0 6868.54 7514.509999999999 6966.76 5946.66 8736.12 7467.129999999999 7228.050000000001 6764.950000000001 11255.410000000002 10442.68 11147.0 True False 8027.781632319634 7896.9664619327 7954.7513263850105 7403.591966955711 7451.048320668182 8257.296740320266 8541.293123605346 7723.902379290485 8706.077606196412 8083.67133524376 8378.892258450787 0.9580958180030266 0.9424833520168462 0.9493798322041919 0.883600330280962 0.8892641283402588 0.9854878766333481 1.0193821402812244 0.9218285831877487 1.0390487593888835 0.9647661153645611 1.0 13.032543807957055 -7.445363074233098 5.079508442944276 1.009959219169648 0.9249706610176545 0.3593286623884936 0.03797799181253605 0.13373828649419012 6.176249560725015 0.00570541046885089 0.009137184380985784 3.5862199795604675e-08 7.445363074233098 -0.08498855815199358 AAS(ph)LNYLNQPSAAPLQVSR ddPTM_A549_PD325901_60min_R1 4 AASLNYLNQPSAAPLQVSR 19 0 Q9NSK0;Q9NSK0-3;Q9NSK0-5 Q9NSK0 KLC4 Kinesin light chain 4 1 AAS(0.992)LNYLNQPS(0.008)AAPLQVSR;AAS(0.999)LNY(0.001)LNQPSAAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR 231.93 2.7927e-75 90230800.0 7026.29 6609.3 7355.21 7749.05 8073.26 7015.2699999999995 6593.53 8073.4800000000005 6999.8099999999995 8554.2 8146.66 True False 7739.59378831869 7166.28890634037 7854.378781070776 8227.691219130567 7506.222068835021 6958.139967025354 6844.450392268059 7912.44810787746 6705.632328194974 8014.086352131091 7144.672465932656 1.0832678230139656 1.003025532732366 1.0993336389487627 1.1515841010713896 1.0506040836198316 0.9738920853549649 0.9579795889740053 1.107461279100718 0.9385499979416663 1.1216870178925609 1.0 12.802652159859221 -7.142877038995033 4.244285798062512 0.9808481525004181 1.0815874423569372 0.059166095025762644 0.06753925070761092 0.17329753586583002 5.235176066052742 0.008107780797006648 0.014370217792716317 7.196527031201258e-08 7.142877038995033 0.10073928985651903 AAS(ph)LPGK ddPTM_A549_MK2206_60min_R1 1 AASLPGK 7 0 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 AAS(1)LPGK 60.91 0.028428 8164000.0 4276.8 3920.5 2987.7 2960.1 3901.4 3354.7 2501.9 3117.0 4002.7 4292.9 4523.9 True False 4998.619282278997 4120.03670419058 3411.400785708203 3685.324632883937 3327.509228153328 3709.6921273303624 2956.4628448818444 3558.844295412153 3096.0948409984508 3323.1309084514633 3400.4907767117184 1.4699699574285192 1.2116006114195859 1.0032083630607682 1.0837625727800542 0.9785379366242647 1.0909284485451958 0.8694223978283364 1.0465678424376033 0.9104847047967531 0.977250381389047 1.0 11.731527263387303 -2.000000009990866 0.6344554713855312 0.9650979877566606 42.27961036498764 0.8354925556295261 0.06374580197703421 46.88902112201992 0.29496747934528916 0.010179535754958707 2717.7734878866477 0.009999999769951813 2.000000009990866 41.31451237723098 AAS(ph)LPGK ddPTM_A549_PD325901_60min_R1 1 AASLPGK 7 0 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 AAS(1)LPGK 58.981 0.031424 16295000.0 4875.9 5832.0 5278.4 6189.4 6636.3 6239.0 5826.0 6510.9 6441.4 6871.2 6309.2 True False 5370.897778552132 6323.483107405777 5636.623965597716 6571.705180852713 6170.189181992133 6188.191652533858 6047.711618109523 6381.034991797758 6170.690358571892 6437.351259353674 5533.208397314029 0.9706660933210672 1.1428239555328097 1.018689982530549 1.1876843792911902 1.1151196085416397 1.1183731405341206 1.0929846092630902 1.1532251333413157 1.115210184667419 1.1634030018602843 1.0 12.433900545711873 -10.649996271909554 0.9235966536085716 1.0000572538458228 1.104926917338866 0.0 0.07489518087978911 0.5205679889044088 0.7919616104772529 0.035918032125921165 0.009652167278493582 2.2387403563826523e-11 10.649996271909554 0.10486966349304327 AAS(ph)LSER ddPTM_A549_PD325901_60min_R1 2 AASLSER 7 0 Q86VY4;Q9P2G4 Q86VY4 TSPYL5;MAP10 Testis-specific Y-encoded-like protein 5;Microtubule-associated protein 10 1 AAS(0.993)LS(0.007)ER;AAS(0.993)LS(0.007)ER 59.153 0.031005 5484200.0 1776.81 1935.26 1764.54 1538.1599999999999 2099.81 1602.1 1702.7 1748.15 1902.14 1817.01 2078.0 True False 1957.190443181612 2098.3511519955605 1884.2922954410037 1633.1686497851829 1952.326589551242 1589.0530287745617 1767.4971802531913 1713.2817768528548 1822.1996706700313 1702.2836785071336 1822.4191735273178 1.0739518501626837 1.1514097209228613 1.0339510924887438 0.8961542292293612 1.0712829506575519 0.871947053596307 0.9698631390231567 0.9401139988758865 0.9998795541330584 0.9340791093699589 1.0 10.831639115380487 -5.964631606337044 6.228944875488103 0.9832628846258474 1.1097016684364958 0.49115968070504545 0.057046238010285424 0.11205072758978835 12.25782669518403 0.007091175184637926 0.02220746824089712 1.084846753509026e-06 5.964631606337044 0.12643878381064833 AAS(ph)LSSIPSGIER ddPTM_A549_MK2206_60min_R1 2 AASLSSIPSGIER 13 0 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 AAS(0.999)LS(0.001)SIPSGIER;AAS(0.93)LS(0.061)S(0.008)IPSGIER 138.42 9.046799999999999e-09 21514200.0 4604.6 5175.0 4579.0 4083.7 6835.1 5171.799999999999 4848.3 5066.3 7453.9 6916.6 7849.1 True False 5381.743908338453 5438.385395787844 5228.371053906972 5084.206683324262 5829.665844402222 5719.076443237004 5729.1733525882955 5784.463539893035 5765.603551432374 5354.1352562126785 5899.951845860414 0.912167429317995 0.9217677597832565 0.8861718180929486 0.861736979580858 0.988087021166536 0.96934290188312 0.9710542564187296 0.9804255510918434 0.9772289167881424 0.9074879585617809 1.0 12.526487464217603 -6.7746571594952245 24.999908768188117 0.9853398615433568 0.896676540583147 0.5861719694174842 0.0286578051528006 61.98540360833058 117238.25068106489 0.002657438327031272 0.0050432799265562375 1.6801298218817565e-07 6.7746571594952245 -0.08866332096020979 AAS(ph)LSSIPSGIER ddPTM_A549_PD325901_60min_R1 1 AASLSSIPSGIER 13 0 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 AAS(0.498)LS(0.498)S(0.004)IPSGIER 178.22 2.9597e-22 19173000.0 5263.6 4997.3 3848.3 5207.8 5265.4 4807.0 4223.9 5554.8 5381.2 5544.9 5834.7 True False 5797.956797142478 5418.440009025874 4109.468779707811 5529.473978228064 4895.576468643879 4767.85338575577 4384.642825906766 5444.005156343699 5155.04687762708 5194.794067701445 5117.068889210701 1.1330620952489858 1.0588952633509805 0.8030903762840859 1.0805940076137954 0.9567149816892563 0.9317547777808408 0.856866092843063 1.063891316339778 1.0074218247279132 1.0151893945877155 1.0 12.321101940611888 -5.5282092846826165 24.99965180957124 0.983292489705308 1.114520460692559 0.27867561214062775 0.0797754017066987 113.19096759403674 530858.0309755488 0.010236090644070595 0.03990659365806187 2.963402993955078e-06 5.5282092846826165 0.13122797098725092 AAS(ph)LTEDR ddPTM_A549_MK2206_60min_R1 2 AASLTEDR 8 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.844)LT(0.156)EDR;AAS(0.962)LT(0.038)EDR 101.65 0.0022794 7730500.0 1820.2 2026.87 1485.81 1068.8 1563.44 1345.54 852.09 919.52 1625.9 1404.62 1747.74 True False 2127.405260382584 2130.0290255382633 1696.5201999575274 1330.6560479802556 1333.460047076444 1487.9241497028345 1006.9037233683891 1049.8647759118967 1257.636246028776 1087.3153664490428 1313.72792282989 1.6193651846875252 1.6213623753615483 1.291378656474826 1.0128855639407441 1.0150199473602184 1.1325968823877244 0.7664476836264745 0.7991493197848699 0.9573034295561843 0.8276564329293283 1.0 10.359450804593436 -6.000976092839219 1.7374583224614277 0.9619036815281397 1.6589864832204964 0.8677431767288968 0.104027897557941 0.09596751955303764 0.5368410790844093 0.01443836439346829 0.06841823232560507 9.97754986998771e-07 6.000976092839219 0.6970828016923567 AAS(ph)LTEDR ddPTM_A549_PD325901_60min_R1 1 AASLTEDR 8 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.963)LT(0.037)EDR 109.66 0.0016547999999999999 4027400.0 906.08 1190.2 808.55 760.46 990.83 845.16 992.89 874.5 992.2 1010.4 1029.2 True False 998.0645745791588 1290.5023310072636 863.4230652061298 807.4318870700314 921.2375189779348 838.2772971719047 1030.674972280256 857.0574114680218 950.501284468444 946.603171564057 902.61492463634 1.1057479190046355 1.4297374171241428 0.9565796461364735 0.8945474587575012 1.0206318263007867 0.9287208468324888 1.1418767230062266 0.9495271882561955 1.0530529227083159 1.048734233976288 1.0 9.817966823322712 -5.777100288404381 24.999997722995197 1.0094317826916828 1.2677427155011631 0.5397043411584381 0.09524266972602465 104.6375270116028 167036.8816238595 0.011680435674399295 0.03649424869499338 1.6707047662986264e-06 5.777100288404381 0.25831093280948036 AAS(ph)LTEDRDR ddPTM_A549_MK2206_60min_R1 1 AASLTEDRDR 10 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.974)LT(0.026)EDRDR 142.83 1.3199000000000001e-08 139780000.0 3455.5 4001.4 3594.7 2257.2 2902.6 1907.7 1895.0 1943.2 2538.4 2456.1 2653.5 True False 4038.7039211361503 4205.054168638741 4104.482513098798 2810.214101329557 2475.63138505097 2109.571547771227 2239.2969707226894 2218.6545508004156 1963.456452991848 1901.2653041644664 1994.5627171256078 2.024856820223925 2.1082586837373074 2.057835774155964 1.4089374463889486 1.2411900432083864 1.0576611753835246 1.1227007060223062 1.1123513598999533 0.9844044692770616 0.9532241266919931 1.0 10.961856772972359 -6.476043393384583 1.4897773932311862 1.0180553086037245 2.118527644200463 0.9699496966197382 0.07662912219048594 0.045252116351033336 0.19364740460099109 0.011594399429744544 0.037404006706458506 3.341616499416543e-07 6.476043393384583 1.1004723355967385 up AAS(ph)LTEDRDR ddPTM_A549_PD325901_60min_R1 1 AASLTEDRDR 10 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.934)LT(0.066)EDRDR 176.87 2.0367000000000003e-11 142830000.0 1871.9 1862.6 2037.9 2096.3 2188.0 2123.5 2214.7 1856.3 2061.6 1806.5 2366.7 True False 2061.9339099800522 2019.5678387952678 2176.2041488882223 2225.7836899572726 2034.322428190226 2106.2069200441815 2298.981620430342 1819.274640260821 1974.9581214071184 1692.4372817007804 2075.6109037474034 0.9934106176920452 0.9729992433307453 1.048464403881866 1.072351126089548 0.9801077959830364 1.0147407282557337 1.1076168545268552 0.876500810906427 0.9515069119368366 0.8153923640722721 1.0 11.019320304539894 -8.25514994464491 24.99718897194575 0.9689156713687208 1.025297518762587 0.2996993948961526 0.06661413938414888 595.5119537051258 2366849.816970516 0.007974474653863495 0.010169361413988316 5.557123587268454e-09 8.25514994464491 0.0563818473938662 AAS(ph)PAKPSSLDLVPNLPK ddPTM_A549_MK2206_60min_R1 4 AASPAKPSSLDLVPNLPK 18 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AAS(0.977)PAKPS(0.011)S(0.011)LDLVPNLPK;AAS(0.951)PAKPS(0.02)S(0.03)LDLVPNLPK;AAS(0.997)PAKPS(0.003)S(0.001)LDLVPNLPK;AAS(0.999)PAKPSSLDLVPNLPK 162.65 1.7216999999999998e-23 653583600.0 15035.0 17992.7 18684.8 17027.35 23746.600000000002 17431.5 16372.2 17207.4 24380.1 23869.600000000002 23603.0 True False 17572.540429541892 18908.45157696462 21334.585601231942 21199.05151438679 20253.50659693082 19276.089759906783 19346.816814810554 19646.601645452374 18858.046277019603 18477.440781842837 17741.723690339455 0.9904641023752565 1.0657618113656262 1.2025091796942389 1.1948698945148089 1.1415749084154125 1.0864834835863668 1.090469965178473 1.1073671300692245 1.0629207514537045 1.0414681856365504 1.0 14.114858560479338 -9.310085398403773 0.6242169341078717 1.0068258602835485 1.1199151883004197 0.26485338987250073 0.056821212467225726 0.5435146632404282 0.4733034691316903 0.023480684328906036 0.01578197841205051 4.896825201542396e-10 9.310085398403773 0.11308932801687122 AAS(ph)PAKPSSLDLVPNLPK ddPTM_A549_PD325901_60min_R1 4 AASPAKPSSLDLVPNLPK 18 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 AAS(0.997)PAKPS(0.002)S(0.002)LDLVPNLPK;AAS(0.993)PAKPS(0.006)S(0.001)LDLVPNLPK;AAS(0.691)PAKPS(0.147)S(0.162)LDLVPNLPK;AAS(1)PAKPSSLDLVPNLPK 192.55 1.5989999999999998e-40 1146986000.0 34440.2 31845.4 35780.1 33753.1 40548.7 37981.799999999996 37784.0 39050.899999999994 41041.2 36618.4 42245.4 True False 37936.5437504648 34529.123619441 38208.35274922003 35837.95232814807 37700.699197420916 37672.48881362566 39221.89079619816 38271.999164661596 39316.381088617505 34306.30797466476 37049.48361565493 1.0239425775541728 0.9319731410467224 1.0312789550749752 0.967299644441065 1.0175769138517985 1.0168154893718273 1.0586352890388275 1.0329968309866027 1.0611856698592343 0.9259591396887632 1.0 15.177165814379466 -7.032427454249389 2.574707280402955 1.0317312568421786 0.9876202868718759 0.014491780507570717 0.04355750121739159 0.28548871945505133 3.773477492964912 0.004759576168109291 0.009231536287700683 9.280525016351276e-08 7.032427454249389 -0.04411096997030273 AAS(ph)PESASSTPESLQAR ddPTM_A549_MK2206_60min_R1 2 AASPESASSTPESLQAR 17 0 Q96BT3 Q96BT3 CENPT Centromere protein T 1 AAS(0.878)PES(0.121)AS(0.001)STPESLQAR;AAS(0.999)PES(0.001)ASSTPESLQAR 128.06 5.7795e-12 8686000.0 1360.5300000000002 1594.71 1436.35 977.3399999999999 1843.65 1212.4499999999998 1538.6599999999999 1407.94 1628.02 1965.81 2267.6000000000004 True False 1590.154202235093 1675.8739274428672 1640.046028233082 1216.7883438744593 1572.4515272683864 1340.7506542408269 1818.2146052623607 1607.5198066354144 1259.2760694137203 1521.7321556856614 1704.4923374237917 0.932919536991576 0.9832100096007594 0.9621903203811903 0.7138714074323976 0.9225336440321141 0.7865982291638035 1.0667191429035412 0.9431076757229993 0.7387983165222195 0.8927773521033493 1.0 10.73512639849281 AAS(ph)PESASSTPESLQAR ddPTM_A549_PD325901_60min_R1 1 AASPESASSTPESLQAR 17 0 Q96BT3 Q96BT3 CENPT Centromere protein T 1 AAS(0.989)PES(0.011)ASSTPESLQAR 151.8 6.3353e-17 3034100.0 903.44 903.42 942.81 974.52 1273.4 1231.6 724.95 907.02 1074.8 1529.2 1194.4 True False 995.1565637226236 979.5543739527656 1006.7947561770959 1034.7138871044983 1183.9607769915135 1221.5702579356794 752.5383689578617 888.9287745565748 1029.6298937176812 1432.6460510250947 1047.4963719254233 0.9500334229257588 0.9351386794325862 0.9611439076647941 0.9877971082635549 1.1302767329067234 1.166180896350302 0.7184162056567379 0.8486222944358439 0.9829436371460634 1.3676859313524117 1.0 10.032729531723454 -6.154160030765706 0.002819572849515721 1.9398343498798278 9.69986346595711e-05 0.000680061759363082 0.1624331828299381 471009.451566937 261.4158949035186 88489.06053657336 91367.47577160933 7.011968706624813e-07 6.154160030765706 -1.9397373512451683 AAS(ph)PFR ddPTM_A549_MK2206_60min_R1 3 AASPFR 6 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAS(1)PFR;AAS(1)PFR;AAS(1)PFR 130.04 0.012422 1730452400.0 7203.7 8251.2 7914.599999999999 7254.799999999999 10442.900000000001 7787.0 7094.599999999999 7601.0 10739.1 11651.5 11208.7 True False 8419.50844644436 8671.150836275294 9037.009290948274 9032.226325680345 8906.763243625983 8611.015171407744 8383.59698601013 8678.465027086226 8306.710996818763 9019.418057681805 8425.270445617414 0.9993161051374855 1.0291836792949216 1.0726076212365465 1.072039928448665 1.0571486459831123 1.022046144036474 0.9950537540751632 1.0300518046397569 0.9859281135764226 1.0705197080496627 1.0 13.040507281257936 -7.543942925250343 3.0107787998976336 0.996583699308123 1.0479017381553637 0.02625721281060711 0.031246364715173443 0.15792610936325657 2.9374271977917865 0.0035701628338355726 0.005628421453047866 2.8579661110811057e-08 7.543942925250343 0.05131803884724073 AAS(ph)PFR ddPTM_A549_PD325901_60min_R1 2 AASPFR 6 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAS(1)PFR;AAS(1)PFR 112.37 0.022025 3246000000.0 9883.2 9623.6 9510.099999999999 10455.599999999999 9779.1 10690.0 10554.6 9728.7 10213.8 9383.2 10223.900000000001 True False 10886.535188372705 10434.614546027144 10155.512574877022 11101.418665609524 9092.249752063546 10602.944184258205 10956.26107869873 9534.65344648249 9784.549505446264 8790.743150653072 8966.425114641936 1.2141444387457472 1.1637430093502585 1.132615556928406 1.238109784409084 1.0140328654745738 1.182516337190379 1.2219207698291534 1.063372896619931 1.0912430963671746 0.980406688089997 1.0 13.130317186487272 -9.793659090157387 0.23423309011893476 0.9406114517934528 1.1979511796714368 0.5347630626041779 0.061111808354130534 2.046897790979487 0.2566596416212204 0.1730132016114096 0.06764776011282392 1.6082031552054838e-10 9.793659090157387 0.257339727877984 AAS(ph)PHQVTPQADEK ddPTM_A549_MK2206_60min_R1 2 AASPHQVTPQADEK 14 0 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 AAS(1)PHQVTPQADEK;AAS(1)PHQVTPQADEK 126.07 1.1244000000000002e-07 76153000.0 7519.700000000001 8309.9 7690.7 7468.0 10920.0 7856.099999999999 7497.9 8416.6 11186.599999999999 12004.9 12042.5 True False 8788.841520986112 8732.838415547321 8781.35690418921 9297.660335251261 9313.682465636524 8687.427287542878 8860.171375610375 9609.678824756473 8652.85296132942 9292.98475223485 9052.014893908095 0.9709265422111605 0.9647397311977938 0.9700996968198721 1.027137100879991 1.028907107952786 0.9597230439147221 0.9788065396990421 1.0616066077425126 0.9559035267554291 1.026620576871667 1.0 13.144023243035084 -6.037234400835988 24.62375729023398 0.9896738756305582 0.9677297198970747 0.0805624569499761 0.03270181086187864 944.2979135665614 624480.6752367927 0.004626153648934534 0.012243274807472209 9.17837080520574e-07 6.037234400835988 -0.021944155733483517 AAS(ph)PHQVTPQADEK ddPTM_A549_PD325901_60min_R1 2 AASPHQVTPQADEK 14 0 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 AAS(1)PHQVTPQADEK;AAS(1)PHQVTPQADEK 145.73 1.2949e-13 112039000.0 14375.4 14902.5 15505.9 15366.9 17497.4 16597.3 15840.199999999999 15783.2 17363.1 15361.8 16790.4 True False 15834.780025389848 16158.385975328307 16558.223618551394 16316.078512237958 16268.44298675303 16462.13709161727 16443.007479090036 15468.391694319123 16633.389288806728 14391.853326338805 14725.28724311506 1.0753460875809768 1.0973222938576839 1.1244754241580814 1.1080312555442127 1.1047963084291945 1.117950150637251 1.1166510511893823 1.0504645131151182 1.1295799541420706 0.9773563726621255 1.0 13.846008156231722 -10.872058585062295 0.8964633635070459 0.9936945885479559 1.1048481350782235 0.7776790199036825 0.023232731764769705 0.25812710880096656 0.3321190552631122 0.020275804519837265 0.003898915915909365 1.3425838382673084e-11 10.872058585062295 0.11115354653026766 AAS(ph)PPASASDLIEQQQK ddPTM_A549_MK2206_60min_R1 2 AASPPASASDLIEQQQK 17 0 Q5VSL9;Q5VSL9-3;Q5VSL9-2 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK 315.66 2.6097999999999996e-172 79565000.0 14337.599999999999 16210.5 14549.3 13344.3 21204.5 16604.7 14538.4 13726.3 23120.0 22242.6 23589.0 True False 16757.436359334868 17035.545209356304 16612.609516184475 16613.654099048385 18085.346139431287 18361.7983326922 17179.839091902235 15672.045060030747 17883.3569150534 17217.9812118434 17731.200276719792 0.9450818950670007 0.9607666115938666 0.9369139853434529 0.9369728974784244 1.0199730338152275 1.0355643186096293 0.9689044635324847 0.8838682556988194 1.0085812937623506 0.9710555937067483 1.0 14.114002579331475 -2.0000000000131837 0.1439386365943224 1.0135798280290647 0.7542208811003335 0.009281774841473411 0.04190430826080568 88.6706022477151 0.8066448027423778 0.08763083470554768 4.798261020391395 0.009999999999696434 2.0000000000131837 -0.2593589469287312 AAS(ph)PPASASDLIEQQQK ddPTM_A549_PD325901_60min_R1 4 AASPPASASDLIEQQQK 17 0 Q5VSL9;Q5VSL9-3;Q5VSL9-2 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 AAS(0.92)PPAS(0.04)AS(0.04)DLIEQQQK;AAS(0.94)PPAS(0.06)ASDLIEQQQK;AAS(0.997)PPAS(0.003)ASDLIEQQQK;AAS(1)PPASASDLIEQQQK 352.27 9.904499999999996e-220 133833600.0 27863.2 27703.3 27569.0 27276.0 35514.4 31068.100000000002 30783.5 31153.8 32557.2 35399.7 33791.1 True False 30691.851552196284 30037.954315739797 29439.998125864553 28960.776571709484 33019.991062028756 30815.09169419572 31954.982937877536 30532.413019316693 31188.93410471277 33164.55690064938 29635.008919431635 1.035661964389411 1.013596938587184 0.9934195803990727 0.9772487887702286 1.1142224101163538 1.0398205641838125 1.0782849104163656 1.0302818906626559 1.0524354552922786 1.11910062152549 1.0 14.855014871271875 AAS(ph)PPLKGSVSSEASELDKK ddPTM_A549_MK2206_60min_R1 1 AASPPLKGSVSSEASELDKK 20 2 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AAS(0.986)PPLKGS(0.01)VS(0.001)S(0.001)EAS(0.001)ELDKK 50.215 0.0029362 6500700.0 1465.0 1690.0 1616.6 1245.0 2560.8 1847.2 1560.5 1479.3 2395.5 2137.1 2419.5 True False 1712.2561841888175 1776.0137814263692 1845.8581886320198 1550.0250558901737 2184.1097122712486 2042.6694779278764 1844.0226505608225 1688.9953051662496 1852.9230748274395 1654.3276257195887 1818.6713751970644 0.9414873998351043 0.9765446389312236 1.0149487223506828 0.852284297773268 1.2009369818308084 1.1231657933289572 1.0139394481650161 0.9286973601721952 1.018833363793755 0.9096352690657662 1.0 10.828669163437544 AAS(ph)PPRPLLSNASAT(ph)PVGR ddPTM_A549_MK2206_60min_R1 2 AASPPRPLLSNASATPVGR 19 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 2 AAS(1)PPRPLLS(0.003)NAS(0.06)AT(0.938)PVGR;AAS(0.999)PPRPLLS(0.008)NAS(0.119)AT(0.873)PVGR 97.999 6.2661e-07 34299000.0 3241.1 4284.9 3324.7 4169.2 4592.7 3472.7 3750.3 4048.0 5135.3 5290.0 6490.6 True False 3788.1184427128856 4502.983107712337 3796.192453139225 5190.654187162502 3917.1199139129 3840.1788090083055 4431.680965330501 4621.816396480076 3972.162749388998 4094.9853259354386 4878.804888553035 0.7764439302749762 0.9229684749799125 0.7780988458968907 1.0639191986015157 0.8028851334275526 0.7871146513807877 0.9083538010975587 0.9473255237822849 0.8141671659608156 0.8393418920160869 1.0 12.25231207332766 -10.949814726071109 1.1284083983040898 1.00238707157174 0.8658483407331767 0.0 0.0969882086383449 0.5625480171654667 1.235526455323151 0.06194235659965675 0.01342321740383736 1.1224972195734298e-11 10.949814726071109 -0.13653873083856327 AAS(ph)PPRPLLSNASAT(ph)PVGR ddPTM_A549_PD325901_60min_R1 2 AASPPRPLLSNASATPVGR 19 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 2 AAS(1)PPRPLLSNAS(0.001)AT(0.999)PVGR;AAS(0.988)PPRPLLS(0.032)NAS(0.053)AT(0.927)PVGR 160.43 6.3087e-27 55303000.0 4180.9 4829.799999999999 5127.7 4759.0 4918.4 5002.5 5189.9 5838.0 5408.0 5796.9 5088.9 True False 4605.341890184092 5236.824196184574 5475.696557365002 5052.952621526812 4572.948551558865 4961.761298573586 5387.404484522251 5721.5565101776 5180.720566826587 5430.882744694857 4462.997561194981 1.0318943326850032 1.1733871964703468 1.2269100491954712 1.1321880758935188 1.0246361305056246 1.1117553237571252 1.2071269165291134 1.2819985742151372 1.1608163562248135 1.2168688578088136 1.0 12.123797302891365 -10.565844943456673 0.9824993787656835 1.0045656686454796 1.1517972749434495 0.0 0.09633722742327748 0.463100896286384 0.833244990797994 0.04418399125066702 0.013907348029269372 2.7174092947102193e-11 10.565844943456673 0.14723160629796994 AAS(ph)PPRPLLSNASATPVGR ddPTM_A549_MK2206_60min_R1 4 AASPPRPLLSNASATPVGR 19 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AAS(1)PPRPLLSNASATPVGR;AAS(0.977)PPRPLLS(0.008)NAS(0.016)ATPVGR;AAS(1)PPRPLLSNASATPVGR;AAS(0.978)PPRPLLS(0.015)NAS(0.005)AT(0.001)PVGR 147.78 2.1713e-21 805223500.0 14591.9 15565.0 15370.099999999999 14870.5 20113.1 16341.0 15219.5 16352.699999999999 23750.199999999997 21645.8 22952.600000000002 True False 17054.655982296805 16357.192016509725 17549.811298461573 18513.77316756211 17154.489633662448 18070.193773722098 17984.68614560104 18670.74530304342 18370.817621275986 16755.998746338995 17252.835960466273 0.9885131940845213 0.9480871465996167 1.0172131317237236 1.0730857935463591 0.994299700812714 1.0473752729770773 1.042419123836322 1.0821841316886216 1.0647998777343908 0.9712025770565635 1.0 14.07454590606723 -5.913127054266218 5.388897820537239 1.0368916113349333 0.9692879809640225 0.35435643011443896 0.03387341414844786 0.14740612087576896 6.994840209044706 0.004437125543038425 0.014317318994580648 1.2214422709721974e-06 5.913127054266218 -0.06760363037091088 AAS(ph)PPRPLLSNASATPVGR ddPTM_A549_PD325901_60min_R1 2 AASPPRPLLSNASATPVGR 19 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AAS(1)PPRPLLSNASATPVGR;AAS(1)PPRPLLSNASATPVGR 212.65 8.994399999999999e-67 1043510000.0 21885.8 21929.6 20740.1 22292.3 23298.3 23073.0 24561.7 24219.0 23883.5 24371.6 25712.9 True False 24107.63030452558 23777.684353937897 22147.647906352926 23669.24474151338 21661.907782771636 22885.101137828762 25496.40893417795 23735.93304556204 22879.75955210851 22832.773016716717 22550.376307502687 1.0690566745223131 1.0544251692166606 0.9821409454255638 1.0496163974717547 0.9606007229052115 1.0148434254826475 1.1306422822618307 1.052573700850611 1.0146065520199872 1.0125229266848232 1.0 14.460863888082796 -8.939119786610165 4.870364584125985 1.0062193072468986 1.0377616996054506 0.09146929371503798 0.04254270828535347 0.3753409156429191 16.827694011103038 0.007776037951894754 0.00812792004259827 1.1504830202598711e-09 8.939119786610165 0.03154239235855205 AAS(ph)PS(ph)PQSVR ddPTM_A549_MK2206_60min_R1 2 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 AAS(1)PS(0.996)PQS(0.004)VR;AAS(1)PS(0.979)PQS(0.021)VR 80.782 0.0013414000000000002 98304000.0 15880.1 18270.7 16056.8 15057.6 14832.3 9917.9 9188.0 9040.7 14107.699999999999 22803.5 23942.3 True False 18560.272648830603 19200.60058953062 18333.895684292107 18746.712675961346 12650.488318229003 10967.405595030801 10857.340668601626 10322.246910982562 10912.328475367589 17652.17351228144 17996.76613613584 1.0313115427756376 1.066891709559841 1.0187327848573495 1.0416711832644023 0.7029311945565595 0.6094097968528505 0.603293979955715 0.5735612072135807 0.6063494070446714 0.9808525253232862 1.0 14.13545006952063 -6.755449023963721 24.87252548245547 0.7532335131567162 1.040103367352218 0.5355444874799506 0.1393206689502079 116.23598042357952 482617.5024831374 0.025796113959667053 0.05261340485818208 1.7561070080798083e-07 6.755449023963721 0.2868698541955018 AAS(ph)PS(ph)PQSVR ddPTM_A549_PD325901_60min_R1 2 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 AAS(1)PS(0.998)PQS(0.002)VR;AAS(0.999)PS(0.999)PQS(0.002)VR 71.15899999999999 0.0031812 132232000.0 19669.5 19742.0 20730.8 19752.4 24720.0 19126.9 19823.8 20621.7 21433.5 24103.0 24352.0 True False 21666.333160079408 21405.727624555027 22137.71675242747 20972.460887044803 22983.752479370356 18971.13686790349 20578.205556999586 20210.384016089298 20532.72453200402 22581.132466556286 21356.8583800468 1.014490650943387 1.0022882225296714 1.0365624174906833 0.982001215433393 1.0761766581195071 0.8882924880762316 0.9635408537533455 0.9463182110610132 0.9614112790665528 1.0573246338353441 1.0 14.38241181997982 -7.240440553478872 24.999770337583403 0.9710357592496472 1.0197449552196318 0.2637055612745941 0.04381283827296761 811.5085196391609 966126.6775104676 0.00533131189920807 0.009226886037002497 5.748565002052643e-08 7.240440553478872 0.048709195969984576 AAS(ph)PSPAR ddPTM_A549_MK2206_60min_R1 2 AASPSPAR 8 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 AAS(0.858)PS(0.142)PAR;AAS(0.956)PS(0.044)PAR 93.93799999999999 0.0025475000000000003 52908000.0 7988.299999999999 6856.5 5159.8 4308.6 7318.3 5355.799999999999 5271.9 5487.299999999999 7276.200000000001 11233.1 10958.5 True False 9336.529744816058 7205.466563520651 5891.53722733112 5364.207193420404 6241.787764493392 5922.547201107686 6229.7359894210795 6265.141579151463 5628.152317703785 8695.534908273232 8237.202010786126 1.1334588774914622 0.8747468562851222 0.7152352485244993 0.6512171470842033 0.7577558200369667 0.7189998731793227 0.756292729165026 0.7605909835582073 0.6832602029589725 1.0556418182881695 1.0 13.00793865475702 -10.919277809609454 1.1642805618038943 1.0004632148336454 0.7684546958999906 0.3439024554046646 0.12650553331957 0.48470476696498843 1.163379056103363 0.09036873610604403 0.02119648475986994 1.2042653491538939e-11 10.919277809609454 -0.23200851893365482 AAS(ph)PSPQS(ph)VR ddPTM_A549_MK2206_60min_R1 2 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 AAS(0.721)PS(0.288)PQS(0.991)VR;AAS(0.71)PS(0.365)PQS(0.925)VR 59.418 0.010639000000000001 14039900.0 1135.1399999999999 1005.35 899.73 805.56 1144.1100000000001 894.89 941.56 724.06 1243.37 1353.08 1494.12 True False 1326.7238804915323 1056.518020802959 1027.3252431386159 1002.9222361629619 975.8129345933526 989.5866658200945 1112.6292642499502 826.6977223407514 961.74868025389 1047.4182882451269 1123.0887683857984 1.1813170230510062 0.9407253019914706 0.9147320069945831 0.8930035313276702 0.8688653667117305 0.8811295185886465 0.9906868411204205 0.7360929479590058 0.8563425325998046 0.9326228858566258 1.0 10.133256246816202 -5.25200217548773 3.34117669376565 0.9108282834694753 1.2205010168831738 0.5813061986883338 0.06828693063860357 0.21502343383768457 3.8474538294268337 0.010735297780524195 0.17198487525929607 5.597547975388209e-06 5.25200217548773 0.3096727334136985 AAS(ph)PSPQS(ph)VR ddPTM_A549_PD325901_60min_R1 1 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 AAS(0.716)PS(0.307)PQS(0.977)VR 65.842 0.0061786 8298900.0 649.8 716.29 789.99 783.9 1018.8 821.66 649.0 668.18 1015.7 1007.9 762.57 True False 715.7672176425228 776.6542721199739 843.6034719957828 832.3197226339296 947.2430026691965 814.9686733805045 673.698050146427 654.8526257229303 973.0136611918949 944.2610219907097 668.7787243295124 1.0702601497380453 1.1613023020411013 1.2614089553185799 1.2445367837745975 1.4163772982145324 1.2185924039338356 1.007355685278186 0.9791768217200033 1.4549112072418195 1.4119184532034619 1.0 9.385385141869756 -11.222112042195905 1.6849436608295238 0.9998829686206555 1.2390493577328796 0.0 0.18963742348752682 0.4730246912908193 2.4189214652450772 0.12292861512292083 0.02537352738697804 5.996363580994796e-12 11.222112042195905 0.2391663891122241 AAS(ph)PSPQSVR ddPTM_A549_MK2206_60min_R1 5 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 AAS(0.906)PS(0.093)PQSVR;AAS(0.565)PS(0.431)PQS(0.004)VR;AAS(0.866)PS(0.134)PQSVR;AAS(0.993)PS(0.007)PQSVR;AAS(0.65)PS(0.34)PQS(0.009)VR 158.06 1.2630999999999999e-08 527235900.0 13572.5 13628.4 13408.199999999999 12185.87 17088.0 13427.5 12916.38 13538.369999999999 18830.999999999996 19569.100000000002 19359.0 True False 15863.20618423395 14322.027348397109 15309.684377592377 15171.408697044484 14574.377836336727 14848.38913754686 15263.119053669194 15457.475407019254 14565.808566927784 15148.426718669798 14551.626018780735 1.0901328939982688 0.9842217859305001 1.0520944090944386 1.0425919878276035 1.0015635240712364 1.0203938115495212 1.04889440080237 1.0622507331530788 1.0009746366577004 1.0410126469109924 1.0 13.82889275042612 -8.830828406445576 13.598440786425053 1.0004503809156884 1.035204191167724 0.059988553190078675 0.029957472487561834 1.0143853690304794 197.1964597154368 0.00439471796167814 0.004677579268841751 1.4762897130572083e-09 8.830828406445576 0.03475381025203572 AAS(ph)PSPQSVR ddPTM_A549_PD325901_60min_R1 4 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 AAS(0.825)PS(0.17)PQS(0.006)VR;AAS(0.991)PS(0.009)PQSVR;AAS(0.989)PS(0.01)PQSVR;AAS(0.92)PS(0.078)PQS(0.002)VR 173.6 1.3245e-10 700913000.0 20318.5 19558.6 19665.600000000002 19575.3 21908.199999999997 21894.4 19615.899999999998 20438.1 22302.5 21522.500000000004 23547.100000000002 True False 22381.219162310877 21206.871862912663 21000.225874859516 20784.42182226809 20369.44361118697 21716.099265465193 20362.393808732337 20030.446062120725 21365.203484032925 20163.565676947186 20650.9559773653 1.0837861059237184 1.0269196199031503 1.016913013512645 1.006462937844092 0.98636807097517 1.0515784009838263 0.9860266919870806 0.9699524847215455 1.0345866558163448 0.9763986567521462 1.0 14.333920948210196 -5.169214936520746 1.8946491412428847 1.011139288015204 1.1188015512575948 0.45879548000533976 0.024312273784618973 0.7472400174715077 2.2599669176766044 0.0032178393917995274 0.1524182072641435 6.77306219279369e-06 5.169214936520746 0.10766226324239092 AAS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 AASPTR 6 0 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;H0Y7I1;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AAS(0.973)PT(0.027)R;AAS(0.5)PT(0.5)R 89.12299999999999 0.038129 23228000.0 7793.8 6303.0 5593.9 3106.1 3071.7 1676.38 2195.3 1858.55 2004.65 7877.0 8358.2 True False 9109.202899884513 6623.7957777102965 6387.1991348439 3867.0946394381285 2619.856999056384 1853.7734189090156 2594.157593576528 2122.0051540706627 1550.599975768244 6097.580229185908 6282.628265415213 1.4499032116907355 1.0543033103157085 1.0166444464022057 0.6155217969405924 0.41700016113928723 0.2950633621145022 0.41290961107104157 0.3377575537537269 0.24680753185796936 0.9705460790593067 1.0 12.617152504964512 -5.892433216253534 1.445228624139492 0.5538179194071162 1.3813866598032603 0.583701055638789 0.24763308850872887 0.3597755973984106 1.2659690776316919 0.046003291473074595 0.30492316251525164 1.2810520735051266e-06 5.892433216253534 0.827568740396144 AAS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 AASPTR 6 0 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;H0Y7I1;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AAS(0.971)PT(0.029)R 79.809 0.043225 20948000.0 4127.1 5304.9 4276.4 4067.8 4839.4 3046.5 2460.1 3255.5 4120.1 4533.6 5586.7 True False 4546.080153789559 5751.962540548172 4566.622220082235 4319.0587673559085 4499.49723902366 3021.690314063855 2553.720451718373 3190.566498609655 3946.946525033698 4247.347722290983 4899.571317009173 0.9278526343738589 1.173972612783463 0.9320452595983073 0.8815176855089386 0.9183450852941704 0.6167254477088363 0.5212130381392696 0.6511929906058109 0.8055697671613886 0.8668814978865693 1.0 12.25843981228179 -6.133643961506181 2.3544895559603702 0.8371670686682574 1.0509942574752489 0.27791583366155437 0.15156436476035318 0.40900250153507334 4.359227256375571 0.02620065535378097 0.08855678338435002 7.351162760802219e-07 6.133643961506181 0.21382718880699148 AAS(ph)PVLLSSNSQK ddPTM_A549_MK2206_60min_R1 4 AASPVLLSSNSQK 13 0 G3V1Z7;P41970 G3V1Z7 ELK3 ETS domain-containing protein Elk-3 1 AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK 202.25 1.1723e-30 26376900.0 10706.3 12574.0 12232.8 10817.7 14500.2 12501.0 11146.800000000001 11054.5 17753.9 16589.5 17996.1 True False 12513.261696096064 13213.962892103653 13967.594983235036 13468.036985625009 12367.239788298784 13823.8475225078 13172.02927348373 12621.509227986411 13732.66999715252 12841.920428091868 13527.171702907164 0.9250464155346533 0.9768459499382123 1.032558415757613 0.995628449273735 0.9142517046368905 1.0219318440037894 0.9737459953031342 0.9330486449930908 1.0151915196139036 0.949342605397104 1.0 13.723572607871468 AAS(ph)PVLLSSNSQK ddPTM_A549_PD325901_60min_R1 2 AASPVLLSSNSQK 13 0 G3V1Z7;P41970 G3V1Z7 ELK3 ETS domain-containing protein Elk-3 1 AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK 162.37 1.038e-18 45417000.0 9792.1 9801.2 9815.1 10241.2 11361.5 10582.400000000001 9807.0 10000.5 10990.3 12246.5 11293.6 True False 10786.186783436975 10627.181521314391 10481.211708991015 10873.775664547255 10563.50743504719 10496.220442983535 10180.21075159632 9801.032182259514 10528.415910797752 11473.253899999236 9904.558796028927 1.0890123432617234 1.0729585981735186 1.0582209591398748 1.0978556327927418 1.0665298326344892 1.0597362950878564 1.0278308162174685 0.9895475794630125 1.062986865706623 1.1583811188640984 1.0 13.273876995571094 -7.5865457318318095 2.5914418899902505 1.0266683951016384 1.0766226308770637 0.0 0.04454113593187212 0.20078323868478345 2.736772036431144 0.004106953744883026 0.006463803363702177 2.5909215792313887e-08 7.5865457318318095 0.04995423577542524 AAS(ph)PYSQRPAS(ph)PTAIR ddPTM_A549_PD325901_60min_R1 3 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 2 AAS(0.997)PY(0.001)S(0.002)QRPAS(0.89)PT(0.11)AIR;AAS(0.999)PYS(0.001)QRPAS(0.618)PT(0.382)AIR;AAS(0.784)PYS(0.216)QRPAS(0.617)PT(0.383)AIR 133.28 1.045e-09 122358600.0 11550.2 13825.0 13352.3 12351.3 11979.099999999999 12352.099999999999 12712.899999999998 12374.1 15503.7 14994.000000000002 16649.4 True False 12722.767801192158 14990.081268841714 14258.467371902543 13114.21174916245 11137.729341651519 12251.508592925697 13196.696366265815 12127.288868206339 14852.133404569044 14047.276281107956 14601.629349242412 0.871325212884702 1.02660332695128 0.976498377740449 0.8981334504181799 0.7627730491754597 0.8390507867234249 0.9037824513022932 0.8305435358031156 1.0171558974231618 0.9620348486545292 1.0 13.833841743375018 -8.777957954275056 24.842209476129796 1.0081014126845609 0.8910990674425269 0.3100629966888697 0.06833681519922317 178.4370524848089 268349.6885459656 0.012524080020422193 0.013351764583472597 1.6674086330021594e-09 8.777957954275056 -0.11700234524203401 AAS(ph)PYSQRPASPT(ph)AIR ddPTM_A549_MK2206_60min_R1 3 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 2 AAS(1)PYSQRPAS(0.35)PT(0.65)AIR;AAS(0.402)PY(0.324)S(0.464)QRPAS(0.21)PT(0.6)AIR;AAS(0.469)PY(0.083)S(0.432)QRPAS(0.346)PT(0.67)AIR 122.35 3.823e-08 61097100.0 4536.4 6439.799999999999 5261.5 4669.0 7709.200000000001 6168.2 5648.8 5881.0 8577.6 7348.599999999999 8409.4 True False 5302.033415668366 6767.5583133902555 6007.6598165825635 5812.905209599373 6575.186892315489 6820.914829880214 6675.113840748462 6714.6497598071455 6634.787295612545 5688.546156175644 6321.113892367097 0.8387815036952116 1.07062749202514 0.9504115760098806 0.9196014038947473 1.0401943398386146 1.079068491095634 1.056002779638068 1.0622573606710761 1.0496231215868799 0.8999278059274815 1.0 12.62596309391798 -6.774661297064643 24.90640661498022 1.0346752706607616 0.9542360721355875 0.2422182743812631 0.06801768254985792 189.27750572801762 356546.1914303037 0.007686179460836154 0.014587728047156405 1.680113815183662e-07 6.774661297064643 -0.08043919852517412 AAS(ph)QDHVR ddPTM_A549_MK2206_60min_R1 1 AASQDHVR 8 0 A0A075B797;M0R3B2;Q9Y314;M0R1K2;A0A075B6F9 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 AAS(1)QDHVR 47.559 0.037301999999999995 10207000.0 637.56 800.38 596.21 355.88 839.78 542.33 372.19 822.49 704.88 913.98 1002.9 True False 745.1645411545542 841.1159233006134 680.761543142581 443.0706159760605 716.2494744498396 599.7190006304813 439.81210529460566 939.0804762699842 545.22580546206 707.511283213322 753.8522513681075 0.9884755796672534 1.1157569958491704 0.9030437223038335 0.5877419814983191 0.9501191687760756 0.7955391783232035 0.5834195022916294 1.245708923155327 0.7232528714646301 0.9385277843626719 1.0 9.558137985011943 -5.8933020479317255 6.062732344654539 0.8549670690504597 1.0491166691066696 0.14775125381047283 0.18196193620564666 0.28755284528273994 14.346722729627684 0.024754709884816633 0.07904025845369045 1.2784918152434557e-06 5.8933020479317255 0.19414960005620985 AAS(ph)QDHVR ddPTM_A549_PD325901_60min_R1 4 AASQDHVR 8 0 A0A075B797;M0R3B2;Q9Y314;M0R1K2;A0A075B6F9 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 AAS(1)QDHVR;AAS(1)QDHVR;AAS(1)QDHVR;AAS(1)QDHVR 121.6 0.00036182 75798600.0 6579.1 5852.24 4684.969999999999 4347.72 6588.200000000001 4222.49 3572.82 3932.7499999999995 4718.53 6001.0 6455.639999999999 True False 7247.005388722562 6345.428803238067 5002.920237213235 4616.268790011464 6125.467560056142 4188.103441402096 3708.7856202221237 3854.308216067308 4520.226593230082 5622.095835862933 5661.63720567367 1.2800193875828276 1.120776300692519 0.8836525647033127 0.8153593425918185 1.0819251282857998 0.7397336299127559 0.6550729913434679 0.680776262421903 0.7983956634840975 0.9930159124694335 1.0 12.467003589832146 -5.604103405429433 2.441851983142071 0.8639183835196795 1.2768786437353083 0.5364486712929151 0.1289174460781597 0.2150450506982029 2.306908053644088 0.020015967212949817 0.13581941550206914 2.4882647923947603e-06 5.604103405429433 0.4129602602156288 AAS(ph)QGSDSPLLPAQR ddPTM_A549_MK2206_60min_R1 2 AASQGSDSPLLPAQR 15 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 AAS(0.95)QGS(0.047)DS(0.003)PLLPAQR;AAS(0.991)QGS(0.008)DSPLLPAQR 80.632 0.00038339999999999994 3221300.0 2177.63 2654.6 2455.7 2011.17 3956.8999999999996 3103.8999999999996 2426.3 2533.3999999999996 3425.3 3492.3999999999996 4059.3 True False 2545.160706058086 2789.707801286649 2803.9551860841584 2503.9067402848527 3374.8452516737343 3432.352637797931 2867.1273034640953 2892.5172082121094 2649.4750190801196 2703.4644144228605 3051.263779019401 0.8341332937383853 0.9142794603563218 0.9189487993021955 0.8206130055034261 1.1060483445840674 1.1248954159253324 0.9396523903238275 0.9479735013738114 0.8683205422284381 0.8860146517033297 1.0 11.575191189663379 AAS(ph)REEPIEWEF ddPTM_A549_MK2206_60min_R1 2 AASREEPIEWEF 12 1 A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3 A0A2R8YDI1 CUX1 Homeobox protein cut-like 1 1 AAS(1)REEPIEWEF;AAS(1)REEPIEWEF 49.448 0.025893 2744700.0 1964.9 1681.99 1797.21 1278.71 2692.0 2302.7 1440.33 1778.28 3216.8 2909.6 2771.2 True False 2296.5270828072394 1767.5961066398447 2052.081402444235 1591.9940074034728 2296.010366070836 2546.3701855914487 1702.0193170664968 2030.356635754098 2488.1999361740386 2252.319339195038 2083.0345587708644 1.1024911099709984 0.8485678258179498 0.9851403539147744 0.7642667284132147 1.1022430503628524 1.222433000388618 0.8170864520225756 0.9747109702069225 1.1945072757901098 1.0812683494430662 1.0 11.024471059400108 -6.808625222429249 24.999941557293763 1.074322785509475 0.9239351922327934 0.18193060690076068 0.12990497863905 138.97450658967776 73630.86188154013 0.01960175937713037 0.037043914576923694 1.5537272317732968e-07 6.808625222429249 -0.1503875932766816 AAS(ph)REEPIEWEF ddPTM_A549_PD325901_60min_R1 1 AASREEPIEWEF 12 1 A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3 A0A2R8YDI1 CUX1 Homeobox protein cut-like 1 1 AAS(1)REEPIEWEF 81.904 1.6304000000000002e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AAS(ph)SLNLSNGETESVK ddPTM_A549_MK2206_60min_R1 2 AASSLNLSNGETESVK 16 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 AAS(0.884)S(0.116)LNLSNGETESVK;AAS(0.838)S(0.162)LNLSNGETESVK 244.86 1.0128999999999997e-65 13849500.0 6243.0 5801.4 6188.9 5000.5 8257.1 5819.799999999999 6064.8 5699.5 9122.5 9229.1 9476.8 True False 7296.665773304292 6096.666480217122 7066.5790817918505 6225.622724480979 7042.491528114226 6435.647373129416 7166.695655957236 6507.421578986709 7056.268315639039 7144.23990011168 7123.449013625766 1.0243164174190333 0.8558587937606333 0.9920165173183475 0.873961856478874 0.9886350719494609 0.9034454181983026 1.0060710257417085 0.9135211842661165 0.9905690771621691 1.0029186544953357 1.0 12.798360215468382 -8.864213656086715 7.477410355231828 0.9958247724554471 0.943174948033552 0.17015396362694668 0.05217210189757085 0.258295636073822 16.803956921206105 0.007841010616685917 0.008328832092455251 1.367056121402789e-09 8.864213656086715 -0.05264982442189514 AAS(ph)SLNLSNGETESVK ddPTM_A549_PD325901_60min_R1 2 AASSLNLSNGETESVK 16 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 AAS(0.875)S(0.125)LNLSNGETESVK;AAS(0.858)S(0.142)LNLSNGETESVK 247.4 2.1792999999999997e-66 12753700.0 6803.4 7115.9 6471.299999999999 7323.400000000001 8401.5 8310.7 7884.900000000001 8044.4 7884.3 8535.400000000001 8814.2 True False 7494.076159601632 7715.581866253218 6910.481333088157 7775.749785351853 7811.407623601543 8243.020414603803 8184.964184282841 7883.948131290278 7552.950289391802 7996.4733873395235 7730.109277817362 0.969465746248496 0.9981206719022935 0.8939694232937634 1.005904251271772 1.010517101746217 1.0663523785178963 1.0588419762409762 1.0199012520967041 0.9770819554991359 1.0344580005209667 1.0 12.916273093825254 -6.405166660003895 21.160557381847013 1.0040699481957633 0.9568834695634668 0.3392742769327818 0.0365072407459578 7.129135671404993 1261.30321444757 0.005526228086024741 0.012841787204833722 3.9339908004462663e-07 6.405166660003895 -0.047186478632296525 AAS(ph)VPKVETVK ddPTM_A549_MK2206_60min_R1 2 AASVPKVETVK 11 1 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 AAS(1)VPKVETVK;AAS(0.993)VPKVET(0.007)VK 76.58800000000001 0.00033939 16091300.0 3292.4 4422.6 4002.2000000000003 3844.6 5252.299999999999 4906.7 4286.3 4822.4 6508.299999999999 7873.7 7030.6 True False 3848.076628548302 4647.691449548082 4569.772140630378 4786.5271725906505 4479.693627679737 5425.923737196144 5065.065227234123 5505.989967980613 5034.180441619462 6095.025701477856 5284.707985311215 0.7281531239273743 0.8794604096321474 0.8647161117193243 0.9057316290502233 0.8476709858200289 1.0267215808853463 0.9584380520763708 1.0418721305480736 0.9525938719058665 1.1533325433342598 1.0 12.367608040133314 -3.555974624053603 0.3617396182363804 0.9876607208912408 1.1936939460805087e-10 0.617233217570341 0.06761559038169558 6.908367807156069 0.23583253786922892 0.011381699028562047 3.893893360958193 0.00027798756919176294 3.555974624053603 -0.9876607207718714 AAS(ph)VPKVETVK ddPTM_A549_PD325901_60min_R1 2 AASVPKVETVK 11 1 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 AAS(1)VPKVETVK;AAS(1)VPKVETVK 94.09 8.0476e-05 38606000.0 7863.9 8220.6 9234.6 9145.0 10591.7 10462.1 9357.7 10792.6 10328.8 9893.5 10112.5 True False 8662.237338902789 8913.37881219821 9861.315488160935 9709.865880198093 9847.775531381356 10376.900126298202 9713.812394229924 10577.333126369094 9894.716455369535 9268.822721564724 8868.726608419156 0.9767171456925569 1.0050347931276475 1.1119201124995224 1.0948432970050554 1.1103934043961599 1.170055249695861 1.0952882891900761 1.1926552247453366 1.1156862639081013 1.0451131409063565 1.0 13.114511258680977 -5.646872567489064 5.12271637047429 1.0844329391471472 0.9838292636244931 0.3679484801100078 0.05265165779164991 0.22004908407392465 8.732889461075235 0.009235179593984953 0.03794765378440505 2.2549007575419307e-06 5.646872567489064 -0.10060367552265415 AAS(ph)YTEEDENHTAK ddPTM_A549_MK2206_60min_R1 2 AASYTEEDENHTAK 14 0 Q14126 Q14126 DSG2 Desmoglein-2 1 AAS(0.981)YT(0.019)EEDENHTAK;AAS(0.972)YT(0.028)EEDENHTAK 179.56 1.2368e-34 3251200.0 2091.8 1859.7 2633.3 2111.6 3448.2 2450.5 2410.4 2827.4 3591.7 3433.9 4020.8 True False 2444.844700400116 1954.350786579065 3006.7415366353443 2628.9420947933263 2940.9743478029204 2709.810283489748 2848.338479277029 3228.192608549351 2778.1856847663194 2658.1796050528746 3022.3243915653475 0.8089286203768026 0.6466383264593419 0.9948440825963316 0.869841140193334 0.9730836160441754 0.8965980922009039 0.9424330780726663 1.0681158573045757 0.9192215410495425 0.8795149893476948 1.0 11.561442800554039 -5.768316400839121 24.999999999999904 0.9588467939509516 0.7277834571800016 0.6223150875277454 0.06621654813535698 56.43226690091123 205151.2553558594 0.008173897842169915 0.026243342008319633 1.7048398926448644e-06 5.768316400839121 -0.23106333677095003 AAS(ph)YTEEDENHTAK ddPTM_A549_PD325901_60min_R1 1 AASYTEEDENHTAK 14 0 Q14126 Q14126 DSG2 Desmoglein-2 1 AAS(0.624)YT(0.376)EEDENHTAK 202.34 4.6605999999999996e-32 81016000.0 12282.0 11991.0 11255.0 12618.0 15764.0 10815.0 11651.0 12246.0 12684.0 12264.0 12915.0 True False 13528.859598469477 13001.523652418164 12018.831981813108 13397.38520244281 14656.791022847669 10726.926225701827 12094.385180671828 12001.743923198843 12150.935589798157 11489.648947012665 11326.536874930376 1.1944391960100018 1.1478816337229365 1.0611215161816163 1.1828315530491895 1.2940222757132696 0.9470614314110698 1.0677919750953155 1.0596128415705721 1.072784711158489 1.0144008776807423 1.0 13.467419199481638 -7.271578149918821 24.999701198751854 1.034602675793423 1.1684846268201334 0.5938168193235693 0.06108440276931423 425.6379478608277 1049516.5416063585 0.009418002643662703 0.015160296750162502 5.350838584590819e-08 7.271578149918821 0.1338819510267104 AASAPAKES(ph)PR ddPTM_A549_MK2206_60min_R1 9 AASAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AAS(0.001)APAKES(0.999)PR;AASAPAKES(1)PR 115.83 5.6614e-06 4615163200.0 23867.300000000003 29900.6 22823.300000000003 28150.399999999998 28422.799999999996 22914.1 23408.63 23109.9 38746.0 36424.7 35273.1 True False 27895.51674053909 31422.412824211402 26059.987131390066 35047.24926371947 24241.843771455482 25338.854852851422 27661.675064785355 26385.799096100527 29970.092864647868 28196.33497194717 26513.81578196469 1.0521124899537946 1.185133557636983 0.9828833143329249 1.3218485619696962 0.914309881716284 0.955684955391728 1.0432928738835647 0.9951716989015499 1.1303575883269965 1.0634582062355191 1.0 14.694456692665486 -6.797074719889923 24.99999054169807 1.039730141493188 1.1281404738793153 0.2405642716156582 0.09667092538709153 248.87529995929586 174598.04783904713 0.01406067314589532 0.02657283698379398 1.5956046015957532e-07 6.797074719889923 0.08841033238612717 AASAPAKES(ph)PR ddPTM_A549_PD325901_60min_R1 10 AASAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AAS(0.001)APAKES(0.999)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR 113.54 2.2085999999999998e-05 5597200600.0 37251.45999999999 38309.1 34585.969999999994 39202.9 41849.3 36813.18 36273.7 37803.04 43816.299999999996 38727.78 42571.2 True False 41033.20079612455 41537.54230279814 36933.18190653296 41624.374096754254 38909.949540247355 36513.38566745092 37654.11550323025 37049.02871128881 41974.85328628768 36282.501361475726 37335.2122810713 1.0990482787994782 1.1125567464325734 0.9892318712021315 1.114882481004602 1.042178339507512 0.9779878949814613 1.00854162070268 0.9923347544503562 1.1242698439823429 0.9718038051673463 1.0 15.188249313508482 -5.720120426142918 24.996164967112154 1.0458041924071717 1.1058026904511176 0.18026815550859132 0.052789551234244586 225.31879942093326 136305.00653399032 0.007854806144319213 0.030421042547710404 1.904932423263246e-06 5.720120426142918 0.05999849804394586 AASAPAKES(ph)PRK ddPTM_A549_MK2206_60min_R1 2 AASAPAKESPRK 12 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKES(1)PRK;AAS(0.001)APAKES(0.999)PRK 76.01 0.00024506 1095650000.0 5863.0 6783.0 6250.9 5995.5 6595.799999999999 5718.799999999999 5659.9 5797.1 7190.8 8232.8 8900.3 True False 6852.531063412311 7128.225727464535 7137.37161407886 7464.397769148224 5625.566557403427 6323.9596201677905 6688.230567067731 6618.856677874169 5562.095281348004 6373.00476207208 6690.109874216336 1.0242778059328959 1.0654870938572618 1.066854169553518 1.115736200075875 0.8408780518066444 0.9452699191892666 0.9997190917363185 0.9893494729261807 0.8313907224131406 0.9526009111798929 1.0 12.707814189652193 -6.751634691696016 24.999866762015927 0.9274042500199696 1.0678147998199181 0.5433880099658119 0.057362116422575556 143.18678595623572 365093.0928719055 0.010341356156747398 0.021321457104523288 1.7715985179699108e-07 6.751634691696016 0.1404105497999485 AASAPAKES(ph)PRK ddPTM_A549_PD325901_60min_R1 4 AASAPAKESPRK 12 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKES(1)PRK;AASAPAKES(1)PRK;AAS(0.005)APAKES(0.995)PRK;AAS(0.002)APAKES(0.998)PRK 88.73 5.6897e-05 1919806000.0 12909.18 17846.2 13374.57 19861.3 15631.6 15374.0 15961.5 15478.0 22614.7 16646.6 16626.1 True False 14219.710450363964 19350.16190524434 14282.248748022945 21088.087392714966 14533.690342092475 15248.799241233457 16568.92361696793 15169.279147743893 21664.28280373766 15595.530835073476 14581.195101531534 0.9752088461439212 1.3270628210174553 0.9794978154103988 1.446252330201657 0.9967420530959038 1.0457852826913894 1.1363213715745164 1.0403316766641844 1.4857686666206227 1.0695646499809472 1.0 13.831821349995714 AASAPAKES(ph)PRKGAAPAPPR ddPTM_A549_MK2206_60min_R1 1 AASAPAKESPRKGAAPAPPR 20 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AAS(0.043)APAKES(0.957)PRKGAAPAPPR 49.765 0.0025926 11821000.0 1061.0 1472.2 1425.4 1165.8 1275.4 735.03 998.09 416.44 1864.2 1662.1 2122.1 True False 1240.0708610405027 1547.1286917253844 1627.5431535791668 1451.4210523347515 1087.7903495121643 812.8103867265742 1179.4300335137777 475.47164529401255 1441.9616765156807 1286.6304556214172 1595.1240030195033 0.7774134541848158 0.9699112349865805 1.0203239061654739 0.9099111101000749 0.6819472012539605 0.5095593729314825 0.739397082158607 0.2980781709722658 0.9039809279943799 0.8066021533033666 1.0 10.6394528663873 -6.5432229899898315 24.54378206250226 0.8351387984525073 0.9335910990319476 0.0 0.21171082446590955 646.401779266901 779832.1273932273 0.035819712037997956 0.07457132474596492 2.862707725397245e-07 6.5432229899898315 0.09845230057944032 AASAPAKES(ph)PRKGAAPAPPR ddPTM_A549_PD325901_60min_R1 3 AASAPAKESPRKGAAPAPPR 20 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AAS(0.181)APAKES(0.819)PRKGAAPAPPR;AAS(0.351)APAKES(0.649)PRKGAAPAPPR;AAS(0.005)APAKES(0.995)PRKGAAPAPPR 61.611999999999995 0.00039685 56395000.0 4113.58 3265.36 4537.34 4876.63 5389.0 10291.400000000001 7269.9 6818.6 7004.3 5000.3 5286.400000000001 True False 4531.187613342456 3540.543346981915 4845.271177641931 5177.848359469699 5010.4952310407325 10207.5902505028 7546.560022741921 6682.597673911782 6709.933629109372 4684.580204643465 4636.206313250631 0.9773481392301236 0.7636725175199327 1.0450939518790991 1.1168287193499162 1.080731721692444 2.201711822299351 1.6277446500112123 1.4413935063270176 1.4472896967358573 1.010433938467013 1.0 12.178729053008357 -6.545408791739396 1.9988650498636487 1.3344204076920014 0.9084961802269733 0.28893984908680626 0.3258924152186098 0.42162227220951776 3.3452648648197623 0.05384176744389754 0.1421857931793638 2.8483359300106906e-07 6.545408791739396 -0.4259242274650281 AASAPAKGT(ph)PGK ddPTM_A549_MK2206_60min_R1 2 AASAPAKGTPGK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AAS(0.012)APAKGT(0.988)PGK;AAS(0.016)APAKGT(0.984)PGK 64.565 0.0025269000000000003 119816000.0 12418.8 14278.1 15105.9 13332.099999999999 18441.300000000003 13132.8 12777.900000000001 12120.1 18689.9 19055.8 21299.8 True False 14514.789829490841 15004.794303304043 17248.143765715948 16598.465098500717 15728.609199042394 14522.504179152895 15099.47903018335 13838.16129124955 14456.667491637385 14751.081545172134 16010.47181542568 0.9065810175254305 0.9371862663564547 1.077303902380803 1.0367255437474692 0.982395108674329 0.9070628490261501 0.9431001911908297 0.8643193936306633 0.9029507473795216 0.9213395904397923 1.0 13.9667282030654 -7.059783885075035 9.244713600737795 0.9418376019960691 0.9941676041402009 0.22498851074423487 0.054084629528136044 0.7337947293180845 109.89928784144321 0.009246373341328256 0.016059655657405986 8.713971093302709e-08 7.059783885075035 0.05233000214413175 AASAPAKGT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 AASAPAKGTPGK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKGT(1)PGK;AASAPAKGT(1)PGK 92.38 0.00010583 194231000.0 17697.699999999997 16996.3 17766.7 17815.0 20556.8 20444.0 22051.0 20442.7 20577.3 19239.7 21974.5 True False 19494.35747564186 18428.637849520048 18972.4551018462 18915.392089199464 19112.961285110065 20277.510842186606 22890.162871770208 20034.954311512094 19712.50764048831 18024.90205853226 19271.775807832557 1.0115496189883466 0.9562501158834654 0.9844684418825221 0.981507479010406 0.9917592169862237 1.0521869413790759 1.1877557678139365 1.0396008396574103 1.0228692901500354 0.9353005264417027 1.0 14.234201895195222 -7.1150926000382775 5.5695929191943065 1.030712637174083 0.9821705133780064 0.17214546628722005 0.05788967686737253 0.3627960412526329 15.408070407893963 0.008351462720179868 0.014635775727929432 7.671978903953487e-08 7.1150926000382775 -0.048542123796076475 AASAPAKGT(ph)PGKGATPAPPGK ddPTM_A549_MK2206_60min_R1 1 AASAPAKGTPGKGATPAPPGK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AAS(0.145)APAKGT(0.749)PGKGAT(0.106)PAPPGK 65.423 0.00047300000000000006 30104000.0 1137.5 1557.9 1468.9 1404.5 1732.8 1114.1 1558.6 1602.5 2211.7 2366.9 1940.9 True False 1329.4821907950723 1637.1904556710886 1677.2121076837634 1748.6025630503998 1477.9074154262798 1231.9933225202726 1841.77744515482 1829.659282450425 1710.7534813591506 1832.2156461165575 1458.9209638850925 0.9112777345077515 1.1221927000838112 1.1496250648269277 1.198558802249224 1.013014037093981 0.844455150770804 1.2624244155421445 1.2541181652349829 1.1726155999591852 1.2558703942654883 1.0 10.510686012949016 AASAPAKGT(ph)PGKGATPAPPGK ddPTM_A549_PD325901_60min_R1 2 AASAPAKGTPGKGATPAPPGK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AAS(0.004)APAKGT(0.903)PGKGAT(0.093)PAPPGK;AAS(0.005)APAKGT(0.92)PGKGAT(0.075)PAPPGK 114.91 5.3455e-15 119221000.0 5741.9 5651.1 6758.3 6458.200000000001 7704.8 7541.5 8140.4 7329.400000000001 8164.700000000001 6652.1 7602.799999999999 True False 6324.813461036632 6127.3380295371735 7216.958878959354 6857.108346363618 7163.641428117024 7480.084524376357 8450.187376597805 7183.209367196934 7821.56605250907 6232.085270745513 6667.703798120059 0.9485744496958453 0.9189577424337235 1.0823754470008333 1.0284062630821964 1.0743790733680751 1.1218381546110892 1.2673309481714399 1.0773138076742732 1.1730524164427247 0.9346673846703617 1.0 12.70297430103278 -5.849484101149327 1.2566500311310373 1.0986957694620751 0.9120947223613461 0.29179551577173357 0.08533755406628664 0.570376229284577 1.3758345376722998 0.012535993837993097 0.1040936148355439 1.4142164964056837e-06 5.849484101149327 -0.186601047100729 AASDGQYENQS(ph)PEATSPR ddPTM_A549_MK2206_60min_R1 2 AASDGQYENQSPEATSPR 18 0 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 AAS(0.003)DGQYENQS(0.997)PEATSPR;AAS(0.007)DGQY(0.002)ENQS(0.992)PEATSPR 101.39 7.5554e-09 2986800.0 274.17 302.38 507.25 527.81 739.76 541.64 485.04999999999995 418.56000000000006 632.7 984.97 886.38 True False 320.44319318706374 317.76985043059483 579.1856774610861 657.1234736942912 630.9422839541463 598.9559852884669 573.1773064111032 477.8921617862402 489.39446021428535 762.4645929086261 666.2673831565089 0.48095284459060833 0.47694042731782565 0.8692991614224541 0.9862759161060871 0.9469805965361738 0.8989723952129436 0.8602812037647978 0.7172678325061898 0.7345316198666814 1.144382288828808 1.0 9.379957458571916 -5.762992095749353 9.753052809722355 0.8745425918501217 0.4783664376550348 0.6568460833293512 0.1173384128723068 0.04039466000472812 64.78217657595567 0.015641179007510587 0.05357854659901035 1.7258693028876068e-06 5.762992095749353 -0.39617615419508695 AASDGQYENQS(ph)PEATSPR ddPTM_A549_PD325901_60min_R1 2 AASDGQYENQSPEATSPR 18 0 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 AASDGQYENQS(1)PEATSPR;AASDGQYENQS(1)PEATSPR 147.64 6.4183e-17 6657500.0 1228.1399999999999 1183.53 1243.71 1304.97 1670.67 1243.46 1140.8000000000002 1170.52 1385.69 819.8800000000001 1027.6399999999999 True False 1352.8198686911167 1283.2702266988967 1328.1156396357876 1385.575033098097 1553.327902698612 1233.3336740278485 1184.2137682697128 1147.173060344824 1327.4542681667792 768.112636878404 901.2467947466859 1.5010537364200611 1.4238832628077047 1.4736425664726853 1.5373980148107398 1.7235322352910083 1.3684749629256685 1.313972793215382 1.272873387213833 1.4729087258944293 0.8522778015474641 1.0 9.815778413241878 -13.103515431638181 0.2523282128907247 1.7507886456142552e-11 1.515286043400443 0.765212304402461 0.11414215209962891 7.265242286725765 0.21472379569559358 3.8386720478529237 0.06368990578714227 7.879244339028758e-14 13.103515431638181 1.515286043382935 AASDPLLSSVS(ph)PAVSK ddPTM_A549_MK2206_60min_R1 2 AASDPLLSSVSPAVSK 16 0 P19532 P19532 TFE3 Transcription factor E3 1 AASDPLLS(0.003)S(0.007)VS(0.989)PAVSK;AASDPLLS(0.004)S(0.004)VS(0.993)PAVSK 300.07 6.490999999999998e-125 35116000.0 8241.0 9646.7 8420.400000000001 7834.6 11637.8 8204.9 8468.1 9387.1 11846.5 11597.4 12182.0 True False 9631.879326894226 10137.675825612869 9614.53933660588 9754.077351708554 9925.89503650044 9073.137072028172 10006.64415713816 10717.750171788079 9163.286664973186 8977.539285255896 9156.873193903966 1.0518742722468284 1.1071110859503717 1.0499806137980154 1.0652192233263824 1.083983017599112 0.9908553804227037 1.0928014339873042 1.1704596039315298 1.0007003996815735 0.9804153770779027 1.0 13.160639328644422 -8.916211468030683 24.99999999899104 1.0002978468356387 1.0749368394691705 0.4346418384408566 0.041860173368758774 18.068675009762096 5389.168538220031 0.007007887540312024 0.007460449239057992 1.212798167182167e-09 8.916211468030683 0.0746389926335318 AASDPLLSSVS(ph)PAVSK ddPTM_A549_PD325901_60min_R1 2 AASDPLLSSVSPAVSK 16 0 P19532 P19532 TFE3 Transcription factor E3 1 AASDPLLS(0.017)S(0.002)VS(0.981)PAVSK;AASDPLLS(0.007)S(0.007)VS(0.986)PAVSK 248.25 3.0155999999999994e-77 54351000.0 8484.7 8243.4 9484.8 9301.8 9974.7 9987.8 9476.9 9599.099999999999 10919.7 10345.0 10914.8 True False 9346.060497893994 8938.100248214814 10128.495564735766 9876.351060079454 9274.111482846914 9906.462668244538 9837.548615458658 9407.63842015173 10460.78298327964 9691.814934511258 9572.348794617883 0.9763602119418046 0.9337415967583965 1.0580993006053623 1.031758377383041 0.9688438733094792 1.0349040638609526 1.0277047803554635 0.9827931077314314 1.0928125591454925 1.0124803371102133 1.0 13.224657251022158 -4.663398726306673 0.47769777701453614 1.0379258216813407 0.8417669026928633 0.1334183677736429 0.03975091736064339 7.872297531230311 0.7930816207012082 0.008999932752605959 0.9859035513820621 2.1707073346112066e-05 4.663398726306673 -0.19615891898847748 AASDS(ph)NPAGPLR ddPTM_A549_MK2206_60min_R1 1 AASDSNPAGPLR 12 0 Q9BUU2-2;Q9BUU2 Q9BUU2-2 METTL22 Methyltransferase-like protein 22 1 AAS(0.193)DS(0.807)NPAGPLR 87.719 0.00027968 13858000.0 1349.9 1464.9 1434.0 1235.5 1993.6 1277.3 1660.0 1266.2 1684.0 2155.5 2078.1 True False 1577.7301181136409 1539.4571529062048 1637.362762896396 1538.1975554637027 1700.34408090595 1412.4630381968802 1961.60051261196 1445.68772757487 1302.5766887954105 1668.5710529402338 1562.0504173577258 1.0100378967168282 0.9855361490253698 1.0482137738332826 0.9847297746417358 1.0885334186473659 0.9042365230349741 1.2557856589098386 0.9255064442928237 0.8338890181270678 1.0681928280923814 1.0 10.60922530388981 -8.472632277559708 24.999969030973308 0.9193552258114656 1.0365629066899817 0.09614448319058033 0.10016360598132512 378.08855554000667 188117.02370280708 0.015405260328016654 0.018623912099099985 3.3679661849013043e-09 8.472632277559708 0.11720768087851618 AASDT(ph)ER ddPTM_A549_MK2206_60min_R1 1 AASDTER 7 0 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 AAS(0.303)DT(0.697)ER 75.109 0.019372999999999998 3185400.0 1101.1 590.84 484.4 520.24 279.53 107.73 153.72 226.36 140.12 779.29 1127.1 True False 1286.9387606896285 620.9112323183167 553.0952038682108 647.6988233544608 238.4115072911518 119.1299170946136 181.64893421609068 258.4472231984265 108.38304372566095 603.2478477595898 847.2099636224889 1.5190316638710823 0.7328894358883987 0.6528431293504786 0.7645080336225497 0.28140781804755355 0.1406143957340156 0.21440840171354764 0.30505687408745924 0.12792937805197452 0.7120405491694537 1.0 9.72657574603631 -3.700804252609711 10.631911907274606 0.5621578789117792 0.9122579099174348 0.0 0.4090122429717253 0.0 0.0 0.06007723858064983 0.0 0.0001991570787509491 3.700804252609711 0.3501000310056557 AASDT(ph)ER ddPTM_A549_PD325901_60min_R1 2 AASDTER 7 0 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 AAS(0.282)DT(0.718)ER;AAS(0.253)DT(0.747)ER 87.323 0.013696999999999999 18751200.0 1027.76 1349.65 927.13 1199.3700000000001 1335.3600000000001 804.78 527.14 777.58 971.4100000000001 1046.19 1391.04 True False 1132.0974386030766 1463.3897420970868 990.0506170855969 1273.4523609330986 1241.5689203419092 798.2261385039589 547.2006011620763 762.0705569002906 930.5850158692715 980.1333848560972 1219.9508985290856 0.9279860689213514 1.1995480669439396 0.8115495617727867 1.0438554227621133 1.0177204032054805 0.6543100541721744 0.4485431354834402 0.6246731387461014 0.7628053038784535 0.8034203557191193 1.0 10.252607366979635 -7.225689794170676 23.675545936684053 0.8122143732747762 1.0031629445531032 0.3448619240994101 0.16867033092120545 451.9837877978416 299330.6437043592 0.03003765079968057 0.05202497202850789 5.947167984731984e-08 7.225689794170676 0.19094857127832698 AASEDMT(ph)SDEER ddPTM_A549_PD325901_60min_R1 2 AASEDMTSDEER 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AAS(0.007)EDMT(0.497)S(0.497)DEER;AAS(0.015)EDMT(0.777)S(0.208)DEER 60.828 0.0040114 32494000.0 1510.1399999999999 1551.23 1431.97 1704.98 1709.9699999999998 1792.63 1252.27 639.01 558.49 831.54 876.0699999999999 True False 1663.4483010936901 1681.9575961421592 1529.1520953351323 1810.2927423094736 1589.867606276251 1778.031415624582 1299.9258201184382 626.2644442563528 535.0186075012908 779.0364224884954 768.3189438652921 2.1650491822121976 2.1891398221687655 1.9902569207030194 2.3561735094050587 2.069280757647178 2.3141840114986425 1.6919091094887173 0.8151099868834609 0.6963496237769384 1.0139492572827702 1.0 9.585561515321903 -8.098120055123077 3.019209615928153 0.8481695065143772 2.1723549916155425 0.9548372281864927 0.13163736026198677 0.03890579840848448 0.6856870363274321 0.02356980182248955 0.031396143043179565 7.977741223890644e-09 8.098120055123077 1.3241854851011654 up AASEQQADTSGGDS(ph)PKV ddPTM_A549_MK2206_60min_R1 2 AASEQQADTSGGDSPKV 17 1 U3KQ26 U3KQ26 FOXK1 1 AASEQQADTSGGDS(1)PKV;AASEQQADTS(0.002)GGDS(0.998)PKV 199.01 2.9204e-48 12273400.0 3799.5 4665.0 3616.7 3733.1 5745.8 4808.8 4125.2 4346.9 6206.6 6336.1 6817.0 True False 4440.762711143627 4902.42857417397 4129.60244391032 4647.709667585224 4900.600431415233 5317.664024176903 4874.6954425463 4963.086386822938 4800.815009903566 4904.770609387438 5124.150760371314 0.8666338909243633 0.9567299643265614 0.8059096301083605 0.9070204771353048 0.9563731944257078 1.037764943471641 0.9513177247331931 0.9685675966456723 0.936899641406273 0.9571870225442041 1.0 12.323097207266006 -6.724556926133451 3.7229920966815464 0.97273462083438 0.8810608410673405 0.5225153823927249 0.04135735322158225 0.1438374154366066 4.177022967025619 0.006037237677875248 0.012748167261625077 1.8855717976948314e-07 6.724556926133451 -0.0916737797670395 AASGEDSTEEALAAAAAPWEGGPVPGVDRS(ph)PFAK ddPTM_A549_PD325901_60min_R1 1 AASGEDSTEEALAAAAAPWEGGPVPGVDRSPFAK 34 1 F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK 150.56 1.2758e-40 17863000.0 3349.4 3468.2 3167.1 3074.4 3276.3 3595.3 3165.3 3843.7 3435.0 3486.4 3764.7 True False 3689.4286223020417 3760.477385648958 3382.0384513194385 3264.2987055310027 3046.1839906214045 3566.0210688179145 3285.7572236186206 3767.0343881756808 3290.6388955342723 3266.2681090072524 3301.665766399563 1.1174446123071176 1.1389636782495174 1.024343071227201 0.9886823611133393 0.9226203395939865 1.080067251236829 0.9951816616500554 1.1409496462398125 0.9966602098318039 0.9892788489517789 1.0 11.68897836567526 -5.808326730524461 5.28040633384288 1.0082980984694518 1.128723850183529 0.39439665846641236 0.053563839444061484 0.11867107588677225 7.3451502881440955 0.00710484160338006 0.02392729517096454 1.5547954802400928e-06 5.808326730524461 0.12042575171407721 AASIENVLQDS(ph)SPEHCGR ddPTM_A549_PD325901_60min_R1 1 AASIENVLQDSSPEHCGR 18 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 AASIENVLQDS(0.5)S(0.5)PEHCGR 109.85 8.5466e-10 12394000.0 1147.4 1376.4 880.11 1116.6 1709.5 1437.3 1342.1 1573.7 1148.7 1565.0 1699.0 True False 1263.8832033287647 1492.3940584762197 939.8395571313667 1185.5698460174071 1589.43061745484 1425.5951053352967 1393.1743499253 1542.311318956233 1100.4241337118542 1466.1856329154284 1490.0337708483694 0.8482245356151605 1.0015840497537893 0.6307505074843085 0.7956664266356782 1.0667077810926915 0.9567535536618182 0.9349951505676806 1.0350848075598305 0.7385229484331177 0.9839949010555896 1.0 10.541129313660495 AASIENVLQDSS(ph)PEHCGR ddPTM_A549_MK2206_60min_R1 1 AASIENVLQDSSPEHCGR 18 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 AASIENVLQDS(0.182)S(0.818)PEHCGR 105.06 1.6847e-09 7402600.0 1292.3 1181.3 1303.0 1320.5 1923.3 1393.7 1565.5 1278.1 2033.8 1932.9 2292.8 True False 1510.4086462984367 1241.423124259746 1487.7849930641598 1644.0225592794984 1640.3851177801043 1541.1804089368136 1849.931085839774 1459.274589017091 1573.1475473112273 1496.2565475426495 1723.4344819391727 0.876394584260004 0.7203193026885027 0.8632675095313952 0.9539222851278213 0.9518117079416777 0.8942494914008622 1.0733979766717154 0.846724725720438 0.9127979994581252 0.8681830166581631 1.0 10.751070738935528 -6.088226844360217 3.6258311532863146 0.9526831822568438 0.79641895082624 0.3672377741353493 0.06932988205977769 0.14387638234587563 3.5237340111667717 0.008832926909613969 0.026352512985546993 8.161559585340472e-07 6.088226844360217 -0.15626423143060375 AASIENVLQDSS(ph)PEHCGR ddPTM_A549_PD325901_60min_R1 1 AASIENVLQDSSPEHCGR 18 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 AASIENVLQDS(0.225)S(0.775)PEHCGR 99.93 5.7126e-08 15274000.0 968.37 968.88 1089.7 1357.8 1345.9 1462.1 1310.1 1320.7 1275.9 1156.3 1153.8 True False 1066.6782095236836 1050.5309178846562 1163.6535948984233 1441.6682222124628 1251.3686271029362 1450.1931423577107 1359.9565724142271 1294.3576024308927 1222.2783600617684 1083.2910206646072 1011.8899145408171 1.0541445212523228 1.0381869636099437 1.1499804259107322 1.4247283241939155 1.2366647884525972 1.4331530747747299 1.3439768030807564 1.2791486344819 1.2079163380301332 1.0705621284467401 1.0 9.982836629649965 -10.16975394432044 0.8395003331627712 1.0130113527817106 1.246783653898974 0.28211762751688596 0.1251104911542961 0.5226274531643229 0.7241740393988044 0.06532813215691688 0.026682324659537973 6.764661282914655e-11 10.16975394432044 0.23377230111726344 AASIFGGAKPVDTAAR ddPTM_A549_PD325901_60min_R1 1 AASIFGGAKPVDTAAR 16 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 55.755 0.011778 4524000.0 2818.6 2570.9 2843.9 2965.5 3548.1 3434.1 3381.4 3319.7 3623.4 3486.2 2785.9 False True 3104.7421970563487 2787.5587655743343 3036.904155759957 3148.6721998608446 3298.8936962805033 3406.133828172227 3510.0810273730785 3253.485979245732 3471.121098712919 3266.080737041384 2443.251961275146 1.2707417189326504 1.1409215298939093 1.2429762480063582 1.288721855038453 1.3502060976792558 1.394098472919898 1.4366430818461917 1.3316211470665187 1.4206971502445136 1.3367760627261707 1.0 11.254586934406552 -10.86073379118179 1.0871689869627108 0.9984947889404152 1.324919874116609 0.0 0.12634090127072156 0.26855236045432546 0.5592329348982263 0.06685932713606998 0.015940586841386613 1.3780539136388361e-11 10.86073379118179 0.32642508517619384 AASLDS(ph)VATSR ddPTM_A549_MK2206_60min_R1 1 AASLDSVATSR 11 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 AAS(0.166)LDS(0.815)VAT(0.015)S(0.003)R 84.507 0.0005122999999999999 5275800.0 1750.1 2185.1 1733.4 1773.8 2617.8 1801.7 1745.5 1674.8 2777.4 2219.1 2995.9 True False 2045.4740941630362 2296.3122566832894 1979.2221849404561 2208.381079628908 2232.7250877786905 1992.354698128334 2062.6347558820335 1912.2080288598884 2148.3233345964222 1717.803768768117 2251.9353473663505 0.9083183034340787 1.0197061205015667 0.8788983161773122 0.9806591837601469 0.9914694444446966 0.8847299725804307 0.9159387094724079 0.8491398436887743 0.953989792428498 0.7628122054112686 1.0 11.136949693175756 -9.710183528763283 1.3273870429515229 0.9902251245301613 0.9322693935312806 0.0 0.08456065399900711 0.4466986502656752 1.5952539829142343 0.013024693493250203 0.009201055122325554 1.9490207878493507e-10 9.710183528763283 -0.05795573099888074 AASLDT(ph)R ddPTM_A549_PD325901_60min_R1 1 AASLDTR 7 0 A0A140LJL2;Q8N350;Q8N350-4 A0A140LJL2;Q8N350-4 DOS Protein Dos 1 AAS(0.261)LDT(0.739)R 67.055 0.025231 3266700.0 905.15 717.06 565.38 664.19 796.04 795.31 661.3 874.92 919.13 672.44 1070.2 True False 997.040161663788 777.4891627222888 603.7500867061302 705.2155078150654 740.1288965889156 788.8332590441902 686.4661333772449 857.4690342385383 880.5021624606737 629.9820236406717 938.572184556754 1.062294598187614 0.8283743919914508 0.6432644144373985 0.7513705598979661 0.7885689654636906 0.840460938459114 0.7313940735431366 0.913588798333591 0.9381294022435748 0.6712131831801347 1.0 9.874323895190274 -8.517290182816483 2.8584451301272877 0.9712193309362079 0.7996465198242703 0.0 0.13349553845549073 0.20726888056648085 3.430628005872673 0.01705651912166369 0.020050817714128366 3.0388538742740106e-09 8.517290182816483 -0.17157281111193767 AASLS(ph)SIPSGIER ddPTM_A549_PD325901_60min_R1 1 AASLSSIPSGIER 13 0 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 AAS(0.12)LS(0.871)S(0.01)IPSGIER 164.0 7.054899999999999e-19 20628000.0 4316.0 3894.8 4417.7 4140.9 5356.3 4646.3 4393.9 4311.5 4677.5 4048.5 6234.5 True False 4754.157142728728 4223.02846480179 4717.511687788165 4396.673988333764 4980.091966231857 4608.462073275854 4561.112268934338 4225.503750193683 4480.9209414444085 3792.8770190786668 5467.696023751713 0.8694991678536321 0.7723597739261513 0.8627969929738701 0.8041182189416857 0.9108209279737388 0.8428526482190414 0.8341927292813704 0.7728124847903144 0.8195263456452688 0.6936883474506227 1.0 12.416717323287083 -10.638929673488411 0.8560195138882811 1.0028565579051747 0.8314047035406867 0.0 0.09823550424085206 0.26248032853051656 0.33446432642360246 0.02867460066343231 0.0072518634921304535 2.296520499946565e-11 10.638929673488411 -0.17145185436448795 AASLT(ph)EDR ddPTM_A549_PD325901_60min_R1 1 AASLTEDR 8 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.063)LT(0.937)EDR 117.89 0.0013294000000000001 3290200.0 911.92 905.23 1024.1 961.58 991.67 616.06 762.27 601.54 934.52 944.17 1064.4 True False 1004.4974470799775 981.5169090049618 1093.6015844135773 1020.9746126933719 922.0185202757772 611.0430116140424 791.2786019801495 589.5418128009992 895.2453742808402 884.5549450669392 933.4855477875252 1.0760717715027932 1.0514537812945008 1.1715249229144968 1.0937229988329293 0.9877159024701279 0.6545821872253823 0.8476602598246715 0.6315489449175569 0.9590350663732086 0.9475829027706347 1.0 9.866483876611133 -6.880453098856276 4.475635710498266 0.9164212069051776 1.0995093624435262 0.42045678441048384 0.12551230651372228 0.2347744857922132 8.141527868114045 0.021036807448102518 0.04084415120960346 1.316882120244981e-07 6.880453098856276 0.18308815553834856 AASLT(ph)EDRDR ddPTM_A549_MK2206_60min_R1 3 AASLTEDRDR 10 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.017)LT(0.983)EDRDR;AAS(0.234)LT(0.766)EDRDR;AAS(0.003)LT(0.997)EDRDR 152.55 8.633200000000001e-09 174142000.0 6317.2 6147.5 5434.3099999999995 4856.299999999999 5113.88 3398.2 3072.1 3206.0499999999997 4957.7 5039.98 4649.9 True False 7383.388919288466 6460.381491904501 6204.976873107059 6046.0937180075925 4361.635026315873 3757.7952684574034 3630.260804093495 3660.517405616342 3834.7888658200795 3901.4450175818706 3495.201499288625 2.112435841192904 1.84835738174734 1.7752844505159293 1.729826941089991 1.2478922966826353 1.075129794154135 1.0386413501002327 1.047297961608612 1.0971581657310945 1.1162289265371188 1.0 11.771159914410083 -6.7046684304157 1.3490519616206778 1.0423837227809412 1.952999289177528 0.9597041367037178 0.07810461594012072 0.054227315847778026 0.19549526510712895 0.011577954467569627 0.03293295139732575 1.9739291911344135e-07 6.7046684304157 0.9106155663965869 up AASLT(ph)EDRDR ddPTM_A549_PD325901_60min_R1 3 AASLTEDRDR 10 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(0.15)LT(0.85)EDRDR;AAS(0.005)LT(0.995)EDRDR;AAS(0.472)LT(0.528)EDRDR 138.63 2.5305999999999996e-07 193274000.0 6593.67 6082.42 6695.5 6343.2 6475.02 7337.8 6432.66 6995.700000000001 7875.2 7258.8 7240.3 True False 7263.054524396699 6595.006879654849 7149.8968933122815 6735.005057547567 6020.236932806338 7278.04338963984 6677.45839638662 6856.165275479516 7544.2327307457 6800.4781292054395 6349.789000043233 1.143826121521085 1.0386182721362784 1.126005429985721 1.0606659618928616 0.9481003121151504 1.1461866511769583 1.0516031944275874 1.0797469452028776 1.1881076254178422 1.0709770244584722 1.0 12.63249293738959 -8.528142909181964 24.964753243626877 1.0912022063386693 1.0712837281869885 0.004931795637940217 0.0665555942635114 762.8893677101655 3617929.1401479337 0.013876232189515622 0.015764853351950294 2.9638559409702132e-09 8.528142909181964 -0.019918478151680796 AASPES(ph)ASSTPESLQAR ddPTM_A549_PD325901_60min_R1 1 AASPESASSTPESLQAR 17 0 Q96BT3 Q96BT3 CENPT Centromere protein T 1 AAS(0.359)PES(0.577)AS(0.024)S(0.02)T(0.02)PESLQAR 88.561 7.1378e-06 3545400.0 786.32 703.99 755.82 1056.1 871.1 725.76 912.73 1025.0 874.49 836.93 1345.1 True False 866.1466275418111 763.3177079531199 807.1144903148814 1121.3328984228763 809.9169411318583 719.8496511849613 947.4644396150206 1004.5555709030559 837.7382264208923 784.0860969686329 1179.6612272914317 0.734233360818794 0.6470651830320304 0.6841917591612818 0.9505550173904753 0.6865673995164467 0.6102172679166343 0.8031665512907058 0.8515627602761615 0.7101515308292248 0.6646705671330222 1.0 10.204156893504779 -11.132100867691689 0.5181956098612585 1.095313633429898 0.7328466359745311 0.0 0.13646763850661467 1.2938162576438437 0.3656889595456917 0.24875277264239407 0.02121715817370374 7.37732867018018e-12 11.132100867691689 -0.3624669974553669 AASPPLKGS(ph)VSSEASELDKK ddPTM_A549_PD325901_60min_R1 1 AASPPLKGSVSSEASELDKK 20 2 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AAS(0.139)PPLKGS(0.661)VS(0.089)S(0.089)EAS(0.022)ELDKK 40.179 0.020309 9685900.0 2295.8 2381.7 2021.8 1976.9 2197.2 2214.3 2155.4 1641.9 2140.3 2329.5 2385.0 True False 2528.8679259213677 2582.414217576876 2159.0115060710577 2099.0086231343466 2042.8762519285024 2196.267474948824 2237.424926480135 1609.151016454368 2050.350634093741 2182.414972445043 2091.6601197606615 1.2090243065927622 1.2346242074321183 1.0321999667508615 1.003513239700973 0.9766769622983771 1.0500116410882914 1.0696885719349818 0.7693176349504122 0.9802503832832806 1.0433889099988034 1.0 11.03043272736915 -5.8370786110922666 3.6874637726785227 0.9850502289346703 1.2253544083875216 0.5833480483153148 0.07558215573317008 0.1058127337145672 2.7891992392497094 0.009934536605086816 0.036555138962674434 1.4551956536254003e-06 5.8370786110922666 0.24030417945285132 AASPS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 AASPSPAR 8 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 AAS(0.386)PS(0.614)PAR;AAS(0.499)PS(0.501)PAR 94.85 0.0025247 60737000.0 8813.2 8373.900000000001 6916.1 6407.9 7223.6 6130.6 4776.200000000001 6785.5 6719.4 8401.1 9268.0 True False 9707.909576065067 9079.597941204605 7385.468135887845 6803.701429603211 6716.2392560671415 6080.674426193954 4957.960904636924 6650.157879378226 6437.006985342932 7870.653112259306 8128.094754692576 1.1943647151087184 1.117063495841101 0.9086346011928574 0.8370598073644804 0.8262993307490256 0.7481057504507327 0.6099782365079535 0.8181693348910462 0.7919453672247938 0.9683269388211004 1.0 12.988701505341096 -5.740442558233627 2.6018024836046862 0.8531716203943891 1.1872168224728121 0.6068720891031492 0.1005471573485124 0.18550591990668788 2.4289839178629045 0.01729555359674734 0.0869265997229136 1.817847476983106e-06 5.740442558233627 0.33404520207842303 AASPS(ph)PQS(ph)VR ddPTM_A549_PD325901_60min_R1 1 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 AAS(0.442)PS(0.578)PQS(0.98)VR 62.408 0.008114399999999999 10836000.0 687.35 793.98 731.4 682.06 547.72 934.83 736.81 875.17 923.22 809.45 968.33 True False 757.1292659996736 860.8914810730521 781.0372022654914 724.18929712935 509.2500367314214 927.2170544218984 764.8497077479026 857.714047792417 884.4202739840321 758.341188858399 849.2315487496188 0.8915463245736058 1.0137299801692494 0.9196987599147316 0.852758353355599 0.599659818904779 1.0918306741984598 0.9006374161134766 1.0099884407913102 1.0414359608827817 0.8929734063400685 1.0 9.730014157790473 AASPS(ph)PQSVR ddPTM_A549_PD325901_60min_R1 1 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 AAS(0.261)PS(0.736)PQS(0.003)VR 113.03 0.00011851 57008000.0 2827.1 2850.7 3006.9 3194.1 3344.1 2951.5 2398.3 3134.7 3585.0 3280.9 3542.4 True False 3114.1051107989792 3090.938493532519 3210.966315958582 3391.3923026725797 3109.221952518709 2927.463962566708 2489.568618900117 3072.1759493754225 3434.3349171733225 3073.7434140781047 3106.7072571237595 1.0023812522593676 0.9949242840454045 1.0335593444138498 1.0916356199625923 1.0008094407315602 0.9423044143776205 0.8013528191919185 0.9888849174092101 1.1054581693522312 0.9893894595411049 1.0 11.601170588370465 -8.604102963368371 10.891860068727066 1.0497330925125086 0.9805352051446159 0.06998620105558595 0.07326084025936469 0.6704407084382465 85.88657997065825 0.01373954558463209 0.015578522516065176 2.48826732515901e-09 8.604102963368371 -0.06919788736789267 AASPYS(ph)QRPAS(ph)PTAIR ddPTM_A549_PD325901_60min_R1 1 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 2 AAS(0.397)PY(0.001)S(0.548)QRPAS(0.638)PT(0.416)AIR 101.53 3.8255e-06 11246000.0 3722.5 3757.6 3726.3 3415.6 4186.9 3947.4 3658.7 3648.8 3845.1 4197.7 4058.4 True False 4100.4054596403375 4074.2661392983464 3979.1891260622133 3626.573854609579 3892.8265880208646 3915.253683156299 3797.9338306174595 3576.0218215717737 3683.503818695436 3932.6565056160375 3559.2425283172583 1.1520444102973029 1.144700341964216 1.1179876320323408 1.018917318996004 1.0937233293459545 1.1000244158712489 1.067062387685351 1.0047142876949293 1.0349122852375352 1.1049138894941566 1.0 11.797354526720051 -2.0000000000000835 0.17243665126053523 0.9919944692520718 1.6830839734702692 0.36885444623203867 0.041402863379952456 20.17725870208531 0.20657899764068355 0.0343852947870919 3.6491031960395577 0.009999999999998078 2.0000000000000835 0.6910895042181974 AASPYSQRPAS(ph)PTAIR ddPTM_A549_MK2206_60min_R1 3 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 AASPYSQRPAS(0.5)PT(0.5)AIR;AAS(0.003)PY(0.024)S(0.032)QRPAS(0.928)PT(0.013)AIR;AASPY(0.001)S(0.007)QRPAS(0.975)PT(0.018)AIR 189.34 6.447599999999999e-35 68716100.0 5672.35 6256.2 5740.3099999999995 5316.68 7662.98 5716.41 5822.360000000001 5974.67 8234.1 8219.6 9001.5 True False 6629.704004357293 6574.613857609259 6554.372274394575 6619.266838674833 6535.76579308822 6321.316711954146 6880.207446151433 6821.597769159488 6369.089497155756 6362.786651239879 6766.179121238428 0.9798298102317818 0.9716878225957893 0.9686962400715922 0.9782872608112826 0.9659463156352215 0.9342520495965146 1.0168526908421742 1.0081905381054879 0.9413125758323124 0.940381053653703 1.0 12.724125654803421 -8.76384029195807 24.999795552378526 0.9722864987449586 0.9768983490211257 0.031490570233253745 0.025874752952708562 506.8831243149311 5277824.356165759 0.005000001614029273 0.005436839722028871 1.7225018937132294e-09 8.76384029195807 0.004611850276167062 AASPYSQRPAS(ph)PTAIR ddPTM_A549_PD325901_60min_R1 3 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 AASPYSQRPAS(0.889)PT(0.111)AIR;AASPYS(0.001)QRPAS(0.5)PT(0.5)AIR;AASPYS(0.244)QRPAS(0.74)PT(0.016)AIR 143.57 7.5781e-15 168782300.0 10161.8 9935.4 10184.8 10128.3 11372.400000000001 11124.1 10770.0 11314.1 10701.3 12678.6 13427.9 True False 11193.418455278223 10772.691026289334 10876.00177417771 10753.902087961762 10573.641856650147 11033.509017783601 11179.85824357013 11088.431399760257 10251.561575773188 11878.071032256583 11776.353426471353 0.95049953495088 0.9147730741567295 0.9235458023644402 0.9131775939900645 0.8978706288554738 0.9369206763939373 0.9493480569663953 0.9415844615222946 0.8705208823581435 1.0086374450648352 1.0 13.523605254202922 -11.045630991273839 1.3498645151057322 0.9999458831211803 0.9166014282719582 0.6403893664002728 0.023330518543091622 0.2533559636918667 0.8239785146684965 0.01908548495669481 0.004274580849774826 9.0026218601724e-12 11.045630991273839 -0.08334445484922204 AASPYSQRPASPT(ph)AIR ddPTM_A549_MK2206_60min_R1 1 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 AASPYSQRPAS(0.111)PT(0.889)AIR 188.09 1.1447e-34 56801000.0 4451.6 4431.1 4093.4 4569.2 6031.0 4618.3 4475.8 4289.0 5753.5 6962.7 6010.7 True False 5202.9212488293115 4656.6240632416475 4673.9056719945 5688.6542051191855 5143.8478892173935 5107.005440620573 5288.994924306395 4896.978884511621 4450.341436451544 5389.821234194836 4518.0773031192375 1.151578625101714 1.0306649822097462 1.034489974035566 1.2590874001185843 1.1385037360175598 1.1303492831109252 1.1706295774653797 1.0838634569467842 0.9850078114819042 1.192945775955129 1.0 12.141493239738521 -8.631336764756261 3.8432126599295646 0.9928924856234185 1.1284627058719627 0.0 0.08431837384649603 0.13535736148172692 3.7934411281233418 0.010325483329459265 0.011708443913608589 2.337024338230079e-09 8.631336764756261 0.13557022024854426 AASS(ph)PDGFFWTQGSPKPGTASPK ddPTM_A549_MK2206_60min_R1 1 AASSPDGFFWTQGSPKPGTASPK 23 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 AAS(0.08)S(0.45)PDGFFWT(0.45)QGS(0.02)PKPGTASPK 100.93 1.3644e-10 11052000.0 2013.3 1834.4 1431.5 2017.2 2606.2 2337.8 1991.0 2233.8 3614.2 2700.0 3203.7 True False 2353.0958195408502 1927.7631246441015 1634.5082253041787 2511.41409055555 2222.8314324122643 2585.184444293955 2352.738928078561 2550.447990725592 2795.5894706914332 2090.068124768561 2408.13287237811 0.9771453421575909 0.8005219092168998 0.6787450327398457 1.0428885047673664 0.9230518207316134 1.073522343366793 0.9769971395951895 1.0590977017837646 1.1608950248375196 0.8679205988764859 1.0 11.233699281839586 -6.776333635502035 1.2736825929945534 1.069210582773505 0.8273606376990338 0.26332228217755493 0.11175918961421699 0.27963717418194456 0.8977147985288018 0.015499615937028964 0.043162239270764964 1.6736566386094444e-07 6.776333635502035 -0.24184994507447122 AASS(ph)SSPGSPVASSPSR ddPTM_A549_MK2206_60min_R1 1 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AAS(0.001)S(0.6)S(0.391)S(0.008)PGSPVASSPSR 216.39 2.7489999999999997e-55 24645000.0 1193.9 1515.8 1257.5 1169.6 1095.5 1080.5 938.45 1174.7 1784.2 1986.7 1180.0 True False 1395.40113194746 1592.9477454947275 1435.832408885788 1456.1520525053395 934.3534012000745 1194.8377928221485 1108.954217506442 1341.2173223678722 1380.0815487819316 1537.9030901769254 886.9734336567626 1.5732163771744339 1.7959362536118078 1.618799790841786 1.641708756148423 1.0534175723256745 1.3470953553773763 1.250267680436053 1.512127952737411 1.5559446274418969 1.733877286308957 1.0 9.79274708380995 -13.062814071861169 0.25930906397986564 6.1358259667884326e-21 1.5479606660617091 0.0 0.2888493387651751 12.307430171869902 0.38160796600847857 6.8234167765695775 0.10985789597252642 8.653383041065231e-14 13.062814071861169 1.5479606660617091 AASSDQLRDNS(ph)PPPAFKPEPPK ddPTM_A549_MK2206_60min_R1 2 AASSDQLRDNSPPPAFKPEPPK 22 2 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AASSDQLRDNS(1)PPPAFKPEPPK;AASSDQLRDNS(0.999)PPPAFKPEPPK 130.71 1.9629e-22 64481000.0 12152.2 11442.7 11916.2 11005.8 15073.5 11640.7 10901.599999999999 10700.6 16843.2 17700.9 17201.7 True False 14203.194267235052 12025.08455427663 13606.096342556526 13702.221494069132 12856.208117744702 12872.511147528714 12882.279607403936 12217.442819213122 13028.242093063458 13702.254396191045 12930.043147231803 1.0984645685637808 0.9300111699048029 1.052285455479664 1.0597197037971713 0.9942896532790837 0.9955505175777076 0.9963060030593871 0.944888016234405 1.0075946340405428 1.059722248423012 1.0 13.658439468943053 -6.809764671473502 24.981228660322618 0.9974336469441051 1.0288386472175695 0.11542673748362786 0.045610487983072066 179.8809332463847 92986.75449003815 0.005565397364860993 0.010517641192986996 1.5496560942345514e-07 6.809764671473502 0.03140500027346438 AASSDQLRDNS(ph)PPPAFKPEPPK ddPTM_A549_PD325901_60min_R1 2 AASSDQLRDNSPPPAFKPEPPK 22 2 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AASSDQLRDNS(1)PPPAFKPEPPK;AASSDQLRDNS(1)PPPAFKPEPPK 167.27 4.6481000000000003e-35 82208000.0 17151.8 17667.1 18518.1 18057.9 23634.0 20227.0 18955.300000000003 19892.7 22091.0 22644.0 22104.0 True False 18893.038109512207 19155.968519692837 19774.849624381466 19173.295470533536 21974.029372873745 20062.27801824048 19676.654314238167 19495.924492978756 21162.592093521864 21214.253975550793 19385.3481288007 0.9746040145362636 0.9881673722037999 1.0200925716160902 0.9890611890558665 1.133538032274337 1.0349196663862883 1.0150271320123818 1.0057041206298367 1.091679754880477 1.0943447512316222 1.0 14.242679023288767 AASSLNLS(ph)NGETESVK ddPTM_A549_MK2206_60min_R1 2 AASSLNLSNGETESVK 16 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 AASSLNLS(1)NGETESVK;AASSLNLS(1)NGETESVK 246.03 6.475299999999998e-66 25538000.0 6998.6 8633.2 8050.9 7929.799999999999 10885.8 8822.0 9069.5 9211.599999999999 14611.3 12356.8 13569.0 True False 8179.792580657923 9072.593004621376 9192.638680476015 9872.601355982253 9284.513240332064 9755.538184430347 10717.310752490464 10517.372509341856 11301.863879451534 9565.390297829688 10199.442814651355 0.8019842582878908 0.8895184932640364 0.9012883201100869 0.9679549692460064 0.9102961219602107 0.9564775607562263 1.0507741400437287 1.031171280673666 1.1080864008783466 0.9378345926984503 1.0 13.316202720913312 -6.770913450781947 0.637621594715641 1.0519596496567716 0.8353672872438027 0.5894609743162996 0.05228737304864146 0.4092746639739129 0.2759874556452861 0.009660980077191465 0.04549914075158148 1.6946754934895068e-07 6.770913450781947 -0.21659236241296886 AASSLNLS(ph)NGETESVK ddPTM_A549_PD325901_60min_R1 1 AASSLNLSNGETESVK 16 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 AASSLNLS(1)NGETESVK 148.15 1.5230000000000002e-14 10587000.0 4226.9 4141.9 4135.2 4767.5 5230.4 4850.9 3926.4 5004.7 4336.7 4973.2 5054.7 True False 4656.011776320685 4490.952448999314 4415.839538977662 5061.977647221915 4863.034747900434 4811.395878710769 4075.8213006085193 4904.8773323888045 4154.443580280485 4659.191303268378 4433.003944383316 1.0503062561493823 1.013072062498257 0.9961280419280022 1.1418843093147972 1.0970066367890274 1.0853579060778598 0.9194264998957756 1.1064455150335157 0.9371621664231156 1.0510234959686073 1.0 12.11406893084217 -8.772275033030683 24.99990860110347 0.9703265781869826 1.0493919075404121 0.093289786533862 0.06389699547724846 211.2207080824171 487324.8382721936 0.01050648195154755 0.01124015947440385 1.6893707363565936e-09 8.772275033030683 0.07906532935342947 AASSPDGFFWT(ph)QGSPKPGTASPK ddPTM_A549_PD325901_60min_R1 1 AASSPDGFFWTQGSPKPGTASPK 23 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 AAS(0.007)S(0.049)PDGFFWT(0.822)QGS(0.122)PKPGTASPK 148.02 1.0298e-27 17585000.0 4589.5 3197.0 3748.6 3886.8 4083.7 4373.0 3250.4 4010.2 4766.5 4679.1 4341.9 True False 5055.422661388672 3466.4224098724767 4003.002538163006 4126.878808436734 3796.8750000001946 4337.387737863528 3374.095750687127 3930.21341505896 4566.180580950246 4383.6608274598 3807.873825571827 1.3276234699371903 0.9103301655096004 1.0512434816723153 1.0837750927361682 0.9971115572428452 1.1390576307270852 0.8860839159187319 1.0321280575699645 1.1991417757295422 1.1512095800079476 1.0 11.894769960199332 AASSPDGFFWTQGS(ph)PKPGTASPK ddPTM_A549_MK2206_60min_R1 1 AASSPDGFFWTQGSPKPGTASPK 23 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 AAS(0.003)S(0.01)PDGFFWT(0.241)QGS(0.744)PKPGT(0.001)ASPK 59.18899999999999 0.00046073 10754000.0 1442.9 1620.1 1542.2 1560.4 2300.4 1436.6 1901.0 1648.4 2209.2 2247.8 2550.2 True False 1686.426244481942 1702.5561699934078 1760.9071498876035 1942.6980700490174 1962.0142073214527 1588.6200584620992 2246.3870930574312 1882.0657480132793 1708.8197273674718 1740.0204188351 1916.9149580605715 0.8797605952160625 0.8881751184809784 0.9186151646858617 1.0134503160299462 1.0235269953271742 0.8287378904223154 1.1718762397942792 0.9818201585308977 0.8914426381733497 0.9077191512948265 1.0 10.904570619422069 -6.019553599476585 5.0694589669474315 0.9663570507891107 0.8872673766075719 0.15709049473706505 0.08376178593019654 0.2808556741035378 20.6813683977066 0.011587364023401906 0.034069589242290456 9.559747038687444e-07 6.019553599476585 -0.07908967418153878 AASSPDGFFWTQGSPKPGT(ph)ASPK ddPTM_A549_PD325901_60min_R1 1 AASSPDGFFWTQGSPKPGTASPK 23 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 AAS(0.006)S(0.044)PDGFFWT(0.159)QGS(0.02)PKPGT(0.76)AS(0.011)PK 226.03 5.219299999999998e-88 16705000.0 5162.1 4142.7 4639.4 4881.8 5289.2 5823.1 4711.7 5900.4 6704.7 6532.3 6376.4 True False 5686.152591862834 4491.819867806915 4954.257582978563 5183.337698627778 4917.704838749422 5775.678604242652 4891.006321841169 5782.711893225745 6422.924775222304 6119.849463190709 5592.143223329924 1.0168109729630515 0.8032376297279802 0.8859318127457539 0.9268964494692044 0.8793953663835353 1.032820221797438 0.8746210757686473 1.0340779308192225 1.1485622808132727 1.0943656517342477 1.0 12.44918559547232 -8.388046170002285 4.890993804892337 1.0710537898772943 0.915239383223353 0.5333886272572268 0.06907206358915648 0.1505198909241993 5.412232145579768 0.012701016409971632 0.01538239596673441 4.092171533949762e-09 8.388046170002285 -0.1558144066539413 AASSS(ph)SPGS(ph)PVASSPSR ddPTM_A549_MK2206_60min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 2 AAS(0.012)S(0.099)S(0.856)S(0.034)PGS(0.999)PVASSPSR;AAS(0.011)S(0.081)S(0.868)S(0.045)PGS(0.993)PVAS(0.002)SPSR 125.67 2.2706000000000002e-10 12634500.0 1261.08 1121.43 995.25 812.0799999999999 1248.52 860.35 1155.0 968.17 1538.53 1437.71 1435.79 True False 1473.919473554152 1178.5059969851914 1136.391415462091 1011.0396364556558 1064.8643619044433 951.3916659458902 1364.8485494378397 1105.411062396273 1190.0554115275565 1112.9303124670391 1079.2437172119005 1.3656965985049698 1.0919739241380282 1.052951615412527 0.9368038195001571 0.9866764521505813 0.8815355148915751 1.2646342319821566 1.024246001868765 1.102675320271426 1.0312131492802794 1.0 10.075804978875754 -5.24099538391276 2.6832922316084358 1.0399217223570043 1.4396074671073837 0.5143302202009401 0.09297098460635127 0.31402878212375585 2.8340660303012983 0.012661236755972671 0.28450958736550347 5.741225644855516e-06 5.24099538391276 0.39968574475037943 AASSS(ph)SPGS(ph)PVASSPSR ddPTM_A549_PD325901_60min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 2 AAS(0.011)S(0.097)S(0.886)S(0.4)PGS(0.603)PVAS(0.003)S(0.001)PSR;AAS(0.007)S(0.075)S(0.913)S(0.027)PGS(0.969)PVAS(0.007)S(0.001)PSR 125.5 2.5324e-10 15316200.0 1269.5 1124.49 1158.52 1477.9 1595.2 1613.35 1528.13 1582.76 1425.6999999999998 1470.29 1648.33 True False 1398.3787054434947 1219.254718697999 1237.1441339467012 1569.1865264455716 1483.1586551412468 1600.211412504487 1586.2838233748225 1551.190610148801 1365.7827870053006 1377.4556384787388 1445.5958596247763 0.9673372375364042 0.8434270965707337 0.8558022117383614 1.0854946187054486 1.0259842993229245 1.1069562781674287 1.097321781058894 1.073045830770042 0.9447888065754476 0.9528635747727418 1.0 10.497448563916254 -6.247083443618636 24.94594837691047 1.0084984851292633 0.8843126654417044 0.4795731527341096 0.06366673623144961 656.59984595033 1140954.7832267478 0.010145969746263316 0.026715341733785175 5.661305045189293e-07 6.247083443618636 -0.12418581968755893 AASSS(ph)SPGSPVASSPSR ddPTM_A549_MK2206_60min_R1 1 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASSS(0.499)S(0.499)PGS(0.001)PVASSPSR 238.17 6.460499999999998e-74 23729000.0 1066.6 1226.1 1418.7 1271.7 1295.8 1253.3 950.62 1213.8 1475.2 1534.2 1595.5 True False 1246.6160041336466 1288.5032529034743 1619.8929928320215 1583.2665570887816 1105.1895365358798 1385.9233741267903 1123.3353489754104 1385.8598671065993 1141.0695554103268 1187.6231544518237 1199.2933164401388 1.0394588104884763 1.074385419513666 1.3507062622848165 1.320166247393415 0.9215339745379494 1.1556166912033041 0.9366643952538697 1.1555637375018863 0.9514516088502539 0.9902691344741621 1.0 10.227968832840057 -6.769443050654807 24.99838676426645 0.9977328862386554 1.1985172850894235 0.36447336041929257 0.11291375296779185 130.70076911690012 408227.34883798554 0.016229673887650783 0.03105825101125871 1.700422916693358e-07 6.769443050654807 0.20078439885076804 AASSS(ph)SPGSPVASSPSR ddPTM_A549_PD325901_60min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AAS(0.002)S(0.034)S(0.481)S(0.481)PGS(0.001)PVASSPSR;AAS(0.001)S(0.127)S(0.436)S(0.436)PGSPVASSPSR 298.1 4.402399999999999e-133 45069000.0 7595.700000000001 8019.1 6851.1 7714.0 8580.8 7949.700000000001 7507.5 7326.7 8032.4 9317.0 9780.2 True False 8366.8098723412 8694.897700033898 7316.056845011091 8190.47626023489 7978.1142101529595 7884.960278914639 7793.202020761635 7180.563220815045 7694.826161423428 8728.723029950837 8577.297401795902 0.975459924076944 1.0137106471571538 0.8529559489775026 0.9549017454518925 0.9301431250923529 0.9192826026136971 0.9085847972497614 0.837159175489425 0.8971154666751203 1.0176542354848543 1.0 13.06630742898028 -10.814745000476432 1.1409129859370233 0.9986099420694384 0.919010506073314 0.31998054832611156 0.048435567639101854 0.5159756915181929 1.2242663864879202 0.031138481247353942 0.008302950825561699 1.5319867160659648e-11 10.814745000476432 -0.0795994359961244 AASSSSPGS(ph)PVASSPSR ddPTM_A549_MK2206_60min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASS(0.001)S(0.041)S(0.469)PGS(0.489)PVASSPSR;AASSS(0.003)S(0.125)PGS(0.86)PVAS(0.012)SPSR 170.11 8.556099999999999e-30 20832800.0 3344.7 3371.0 2700.2 2299.9700000000003 3564.3 3089.1000000000004 2936.7 2750.3999999999996 4277.6 4842.4 4673.1 True False 3909.2035899360667 3542.569501294845 3083.1289626031034 2863.462753249579 3039.9961915996587 3415.986511621378 3470.2603767394817 3140.277622746738 3308.730429923546 3748.498476807138 3512.6402990012016 1.112896071666554 1.00852042900668 0.8777240765243662 0.815188151791058 0.86544477453728 0.9724840065726894 0.9879350236134994 0.893993507857795 0.9419496869247796 1.0671455536944678 1.0 11.778340134089886 -10.398412509429285 0.7671287557939757 1.000085962670947 0.936826450184155 0.1323686945994096 0.07997294112376974 1.4975108551887053 1.6051142040933042 0.05351267288504399 0.016116742700623625 3.9956504737127916e-11 10.398412509429285 -0.06325951248679207 AASSSSPGS(ph)PVASSPSR ddPTM_A549_PD325901_60min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASS(0.004)S(0.004)S(0.18)PGS(0.811)PVASSPSR;AASSSS(0.005)PGS(0.995)PVASSPSR 207.92 7.5782e-55 24434000.0 3570.2 3210.1 3939.5 4169.5 3561.7 4332.9 4073.9 3489.4 3788.4 4594.4 4913.6 True False 3932.6440757576706 3480.6263928469307 4206.858160137961 4427.040545378453 3311.5384791979554 4297.614298968414 4228.934493823621 3419.801179618656 3629.1867225158735 4304.308799914789 4309.258349876724 0.9126034589850415 0.807708916534675 0.9762371662535172 1.0273323588280796 0.7684706300546332 0.9972978990900735 0.981360166986646 0.7935939091970401 0.8421836028048061 0.9988514148932202 1.0 12.073223878564788 -11.012987552570767 1.3392265359753524 0.999214833460862 0.8955960341932252 0.16490889571506873 0.08478155422032037 0.6289996868035582 2.0336103819660747 0.05766538068818323 0.013505198698299484 9.705377836874699e-12 11.012987552570767 -0.10361879926763684 AASSSSPGSPVASS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASSSSPGSPVAS(0.005)S(0.994)PSR;AASSSSPGSPVAS(0.033)S(0.967)PSR 242.19 3.8419999999999994e-74 44609000.0 1927.32 2439.9 2462.01 1886.26 2442.8 2220.3 2212.3999999999996 2144.42 3225.6 3352.1 3181.1 True False 2252.604497550027 2564.080488344496 2811.1600389669184 2348.3937846774293 2083.467355957592 2455.2506722841413 2614.364442230542 2448.39810201082 2495.00675022475 2594.8582818654413 2391.1450761063784 0.9420609899663872 1.072323262175174 1.1756543202073173 0.9821209963978584 0.8713262013153157 1.0268095804049453 1.0933524980791391 1.023943769232802 1.0434359567540312 1.085194833134416 1.0 11.223485948893865 -10.997130964833827 1.2996334113058245 1.0001397632465767 1.029265601026298 0.0 0.07943217831522012 2.11850220543956 6.416960531758493 0.053592649437374 0.01248097620072716 1.0066280666588767e-11 10.997130964833827 0.02912583777972122 AASSSSPGSPVASS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 AASSSSPGSPVASSPSR 17 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASSSSPGSPVAS(0.005)S(0.995)PSR;AASSSSPGSPVAS(0.016)S(0.984)PSR 258.92 1.3572999999999998e-86 56157000.0 7331.7 6558.299999999999 7375.1 7633.7 9300.7 7880.1 7826.700000000001 7706.2 9250.5 8770.7 8602.7 True False 8076.008786687732 7110.99095735585 7875.61863607907 8105.216311609425 8647.450917673139 7815.927078238826 8124.549351434575 7552.493795603051 8861.733654480284 8216.916505182975 7544.6224370084 1.0704324641976435 0.9425244293835737 1.0438718042995823 1.0743037679196723 1.1461741114114696 1.0359600024382405 1.076866260607221 1.001043307158227 1.1745761604995764 1.089109040748917 1.0 12.881232989007808 -5.996853407425782 24.37170694645275 1.0779936663745218 1.0031583482437179 0.17437937960225602 0.057278162326867006 99.4153546827474 769967.8287734203 0.00962477943231908 0.02969918334519852 1.0072716078250434e-06 5.996853407425782 -0.07483531813080391 AASVAAATT(ph)SPTPR ddPTM_A549_MK2206_60min_R1 1 AASVAAATTSPTPR 14 0 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 AASVAAAT(0.014)T(0.597)S(0.388)PT(0.001)PR 145.81 4.4186999999999996e-13 20985000.0 2860.4 2310.1 2413.2 2743.8 3185.3 2193.0 1814.3 2281.0 3588.6 3521.5 3445.3 True False 3343.165589934262 2427.67422276512 2755.428047016448 3416.031123173861 2716.7465895413966 2425.061804404414 2143.9348253204093 2604.33873526953 2775.7878298166356 2725.9907042120326 2589.736924557325 1.2909286492510137 0.9374211719130864 1.063979905019675 1.3190649176683373 1.04904346220641 0.9364124137122308 0.8278581523051348 1.005638337459586 1.0718416235622517 1.052612981018525 1.0 11.338589835503136 -6.986424829858488 24.990762302839673 1.0084365559257114 1.1377308411493667 0.3075846630587743 0.11511321756438186 286.6965197887548 527781.1738906114 0.016764533682955714 0.03167155317606448 1.0317516453868418e-07 6.986424829858488 0.12929428522365538 AASVAAATTS(ph)PTPR ddPTM_A549_MK2206_60min_R1 1 AASVAAATTSPTPR 14 0 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 AASVAAAT(0.001)T(0.05)S(0.94)PT(0.009)PR 155.81 6.0746e-19 28245000.0 2607.0 3082.4 2699.7 2919.0 3823.9 3128.3 3168.8 3192.4 4325.3 4419.5 5267.9 True False 3046.9978649694526 3239.28099400511 3082.558055084658 3634.155131038891 3261.4093754896994 3459.334629602524 3744.5299423884207 3644.932476314968 3345.626456084792 3421.131880523947 3959.735043356322 0.7694953908801884 0.8180549856334464 0.7784758377348001 0.9177773490517523 0.8236433346624342 0.8736278038114257 0.9456516411801406 0.9204990829955826 0.8449116972354282 0.8639799994355561 1.0 11.951188183546682 -14.999999999999998 0.060022978743995425 1.506635903284561 0.6286091046576933 0.3414765113318017 0.055494484147763236 142.3405367327302 0.6459911832461604 10.9794752329524 1.946741390247654 1.000000000000004e-15 14.999999999999998 -0.8780267986268678 AASVAAATTS(ph)PTPR ddPTM_A549_PD325901_60min_R1 2 AASVAAATTSPTPR 14 0 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 AASVAAAT(0.009)T(0.254)S(0.531)PT(0.207)PR;AASVAAAT(0.014)T(0.354)S(0.528)PT(0.104)PR 142.39 5.9129e-13 78471000.0 14746.8 14433.7 15803.5 14711.0 17968.3 16663.3 16183.7 16029.5 16799.5 18353.5 19203.1 True False 16243.884279979615 15650.078554074566 16876.020544165578 15619.665058894929 16706.268595269852 16527.5996094995 16799.579559560436 15709.77904760052 16093.475436834931 17194.6568777721 16841.240438480472 0.9645301567492641 0.9292711312591782 1.0020651748196432 0.9274652372520986 0.9919856352800341 0.9813766194879365 0.9975262582900458 0.9328160300891684 0.9555991730907792 1.0209851786501491 1.0 14.03971078330633 -7.4116348616803185 0.004169656977123282 1.9321429304822852 5.5463919804588785e-08 0.1931513243614268 0.028254125033674596 16845.97783359257 26.001688390878243 5954.528404398027 6093.696367368377 3.8758337336459824e-08 7.4116348616803185 -1.9321428750183653 AASYT(ph)EEDENHTAK ddPTM_A549_MK2206_60min_R1 1 AASYTEEDENHTAK 14 0 Q14126 Q14126 DSG2 Desmoglein-2 1 AAS(0.022)YT(0.978)EEDENHTAK 194.53 3.2917999999999996e-31 53602000.0 3263.9 3393.5 3453.3 3208.0 4628.1 3508.6 3666.1 3935.4 4130.6 5067.7 4762.6 True False 3814.766525306402 3566.2146551895767 3943.0298668829355 3993.9601440125907 3947.3126208069984 3879.8777231798126 4332.182915232956 4493.255001657038 3195.025695212782 3922.9030503294957 3579.914978926859 1.0656025485973815 0.9961730030411534 1.1014311485310544 1.115657820792674 1.1026274769213298 1.0837904659799693 1.210135698957745 1.255128970410344 0.8924864735671867 1.0958089992141247 1.0 11.805709609320019 -8.781360081374247 24.99999826301552 0.9492297165515632 1.113381928148275 0.2518385129898244 0.0819626379662819 148.57722562744917 186460.04173172606 0.01361131771636949 0.014499333305847626 1.6543977037425643e-09 8.781360081374247 0.1641522115967119 AAT(ph)PLPSLR ddPTM_A549_MK2206_60min_R1 2 AATPLPSLR 9 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 AAT(1)PLPSLR;AAT(1)PLPSLR 105.98 0.00057871 14561900.0 4165.3 4257.7 3488.8 3684.2000000000003 5262.700000000001 3962.3999999999996 4309.9 4276.9 6158.4 5808.7 6257.3 True False 4868.300808192274 4474.39874389293 3983.564300692435 4586.829165390023 4488.563801456533 4381.698537971754 5092.953041750777 4883.163672456927 4763.532232943979 4496.510635682642 4703.439717305471 1.035051175479134 0.9513035167497043 0.8469470302841594 0.9752073888634312 0.9543151547029846 0.931594492824065 1.082814567179879 1.0382111743646236 1.0127762912358391 0.9560047339691693 1.0 12.199500498491314 -7.7241128030127975 24.99997130769347 1.0143469039674373 0.945955848169921 0.3158411495801924 0.05024535542706859 150.60226159074878 100867.50793385 0.007173110367290288 0.010639268731386617 1.8875010286681535e-08 7.7241128030127975 -0.06839105579751636 AAT(ph)PLPSLR ddPTM_A549_PD325901_60min_R1 2 AATPLPSLR 9 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 AAT(1)PLPSLR;AAT(1)PLPSLR 110.88 0.00036366 27205000.0 4844.4 4843.0 5887.1 5920.6 5388.9 4957.9 5357.9 5906.6 6207.9 5590.4 6115.2 True False 5336.19992174121 5251.136606509979 6286.634008008171 6286.3020153418065 5010.402254695751 4917.524506186506 5561.797816455375 5788.7882293619405 5947.003551553769 5237.4211899363645 5363.069167446706 0.9949899498092268 0.9791290103778362 1.1722082657757635 1.1721463622917696 0.9342415878408565 0.9169235660870064 1.0370550225633732 1.0793797448109204 1.1088806364183192 0.976571628374101 1.0 12.38884314456637 AAT(ph)PQKPEPKPDIVAGNAGEITSSVVASR ddPTM_A549_MK2206_60min_R1 2 AATPQKPEPKPDIVAGNAGEITSSVVASR 29 2 O60890 O60890 OPHN1 Oligophrenin-1 1 AAT(1)PQKPEPKPDIVAGNAGEITSSVVASR;AAT(1)PQKPEPKPDIVAGNAGEITSSVVASR 114.2 8.3989e-21 6988600.0 2454.1000000000004 2426.8 2304.6 2370.7 3633.0 2336.0 2618.3999999999996 2575.8999999999996 3832.9 3725.8999999999996 3773.5 True False 2868.2920830155476 2550.3137542991194 2631.4269340104847 2951.5216064247657 3098.5905126059997 2583.193969488698 3094.129386881419 2941.0417133629026 2964.7542698835705 2884.2166022500655 2836.4358066981304 1.0112310936994202 0.8991262020725641 0.9277230698457813 1.0405740893042124 1.0924239869235897 0.9107182906761323 1.090851194155269 1.036879349223328 1.0452393327155232 1.016845364678835 1.0 11.469863498430751 -6.261071299570206 24.99981775725869 1.0260628852204394 0.9413367264971316 0.3309299968736492 0.05241228517025309 26.488200254629263 1799002.8167615135 0.006856913902593819 0.01697552959237809 5.481869598555522e-07 6.261071299570206 -0.0847261587233078 AAT(ph)PQKPEPKPDIVAGNAGEITSSVVASR ddPTM_A549_PD325901_60min_R1 2 AATPQKPEPKPDIVAGNAGEITSSVVASR 29 2 O60890 O60890 OPHN1 Oligophrenin-1 1 AAT(1)PQKPEPKPDIVAGNAGEITSSVVASR;AAT(1)PQKPEPKPDIVAGNAGEITSSVVASR 169.03 1.8762999999999997e-57 11161100.0 3252.2 3243.2 2895.9 2661.8 4393.2 3554.8 3510.4 3771.8 4010.3999999999996 3460.9 3840.1000000000004 True False 3582.3609498569 3516.5158460113894 3092.4331884613603 2826.2133406135904 4084.6367877172306 3525.850887390185 3643.9901929645853 3696.5684900801407 3841.8568345416716 3242.3781833591092 3367.7920443995426 1.0637120411915497 1.044160625018153 0.918237571587566 0.8391887929402979 1.2128530306702763 1.0469324830354314 1.0820116399480024 1.0976237372575708 1.1407642704455203 0.9627608060750099 1.0 11.717587341778962 -6.759808904048996 24.999744549143905 1.0784343679213702 0.9684496918961352 0.29043316139035813 0.0836094138578973 44.97713981351262 689600.5992014945 0.012112241188553958 0.024205492276053484 1.7385656548940688e-07 6.759808904048996 -0.10998467602523498 AAT(ph)PTRPPSRPPSR ddPTM_A549_PD325901_60min_R1 2 AATPTRPPSRPPSR 14 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 AAT(0.95)PT(0.05)RPPSRPPSR;AAT(0.907)PT(0.093)RPPSRPPSR 102.08 9.7329e-06 76051000.0 4532.7 4707.799999999999 5329.200000000001 5377.4 5012.4 3973.0 5130.0 4469.6 4482.1 5518.799999999999 5041.6 True False 4992.856367202623 5104.5428280255355 5690.871559082938 5709.549785038511 4660.346315841261 3940.64520524395 5325.224957243716 4380.45032166663 4293.732923922607 5170.342026155701 4421.5151613355765 1.12921842061364 1.1544781916983502 1.2870862931438949 1.2913106880117238 1.054015681455572 0.8912431737661681 1.2043891659155053 0.9907124960176451 0.9710998983944746 1.1693597867464807 1.0 12.110325120606452 -6.904992314531964 5.619160458405405 0.9976813198011171 1.2150025297650184 0.39140101418964757 0.09845918652434231 0.1074241012145253 5.215214340306506 0.011871362780384382 0.02269476889306552 1.2445366354495538e-07 6.904992314531964 0.21732120996390136 AAT(ph)SPAPGPSDATAR ddPTM_A549_PD325901_60min_R1 1 AATSPAPGPSDATAR 15 0 Q8IXZ2;Q8IXZ2-2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 AAT(0.5)S(0.5)PAPGPSDATAR 115.24 1.1014e-06 5490400.0 849.54 945.7 991.47 796.74 853.72 1276.8 957.09 881.66 997.62 1023.1 947.45 True False 935.7846754017061 1025.397457934438 1058.7571163934467 845.9528202721733 793.757652374113 1266.4021641216907 993.512583689744 864.0745996511097 955.6935007170013 958.5012913966616 830.9196563803933 1.1262035603756444 1.234051270854776 1.274199145806162 1.018092199139044 0.9552760562096179 1.5240970103395104 1.195678277750257 1.0399015031310537 1.1501635487601063 1.1535426849474621 1.0 9.69856517586148 -10.359745577691793 0.4928817054324153 0.9791348376080544 1.1805426887352768 0.022599958522648622 0.15052599338674671 1.8563544574185682 0.7275476056571424 0.17309497858015657 0.03805060274668276 4.36771630799644e-11 10.359745577691793 0.20140785112722237 AAT(ph)SPGVGQSAPGTR ddPTM_A549_MK2206_60min_R1 2 AATSPGVGQSAPGTR 15 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 AAT(0.5)S(0.5)PGVGQSAPGTR;AAT(0.5)S(0.5)PGVGQSAPGTR 170.74 3.4646e-27 17953900.0 3245.0 3103.0 3392.5 2549.8999999999996 4116.5 3119.3 2398.6000000000004 3197.4 4469.0 4576.299999999999 5040.700000000001 True False 3792.676667367039 3260.9294460153983 3873.6075126401856 3174.625614469362 3510.968303094575 3449.3822555762367 2834.394572018704 3650.6412416268254 3456.7786355265416 3542.510651621616 3788.9550737573245 1.0009822216250308 0.8606408317166166 1.0223418956506432 0.8378630922433289 0.9266323391934327 0.9103782410794463 0.7480676114768421 0.9634955206810252 0.912330330720607 0.9349571537961464 1.0 11.887584318345665 -10.385447714589507 0.7673765127440415 0.9994830340896811 0.9059685750231457 0.06115356689133189 0.07481076682555395 0.8413342289706078 0.9062782385643455 0.0442647419060761 0.013523220827867888 4.11672906282119e-11 10.385447714589507 -0.09351445906653544 AATAARPPAPPPAPQPPS(ph)PTPS(ph)PPRPTLAR ddPTM_A549_MK2206_60min_R1 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 AATAARPPAPPPAPQPPS(0.852)PT(0.249)PS(0.802)PPRPT(0.098)LAR 63.625 0.00073482 6693000.0 1294.2 1185.0 1053.3 571.72 1585.7 1153.0 1275.7 1202.7 2027.8 1581.7 1827.0 True False 1512.6293198478957 1245.3114384557678 1202.6737783534 711.791425665486 1352.4456305640888 1275.0096947005422 1507.4781770717332 1373.186408114276 1568.5065377311964 1224.3928714616416 1373.3054773651734 1.1014514576538565 0.9067985666561418 0.8757510970252971 0.5183052404561369 0.984810483068118 0.9284239491615357 1.0977005494538505 0.9999132973305213 1.1421395775254142 0.8915662914348556 1.0 10.423436858188234 -7.467016136887442 2.11588845539569 1.0646454953766586 0.8569051501904724 0.16258298902709434 0.14742525294783146 0.2965008818878523 2.6288106641668403 0.021998890581074654 0.03698635966474266 3.4118023430376453e-08 7.467016136887442 -0.20774034518618623 AATAARPPAPPPAPQPPS(ph)PTPS(ph)PPRPTLAR ddPTM_A549_PD325901_60min_R1 2 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 AATAARPPAPPPAPQPPS(0.762)PT(0.309)PS(0.829)PPRPT(0.099)LAR;AATAARPPAPPPAPQPPS(0.973)PT(0.183)PS(0.827)PPRPT(0.017)LAR 75.536 4.1037e-06 74753000.0 4904.679999999999 5131.24 5274.2 5128.4 5361.67 5525.25 4248.47 5163.8 5316.65 5612.13 6013.200000000001 True False 5402.599502965421 5563.667602888345 5632.138928341068 5445.169620558543 4985.084795957354 5480.254195890801 4410.147850701987 5060.803958077269 5093.209689648409 5257.779154027902 5273.61452081543 1.0244585533585884 1.0550008122376122 1.0679845684796472 1.032530838017449 0.9452880517301324 1.0391836897178863 0.8362666314147038 0.9596461664199804 0.965791047021934 0.9969972460586521 1.0 12.364576404739646 -6.632680749266546 5.494312354536706 0.9724072811366975 1.0497610873179206 0.3860482527286152 0.04893934674424735 0.1797007645506905 8.036263774568576 0.006912092161876888 0.014566464116754333 2.3298032713328456e-07 6.632680749266546 0.07735380618122312 AATAARPPAPPPAPQPPS(ph)PTPSPPRPTLAR ddPTM_A549_MK2206_60min_R1 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 AATAARPPAPPPAPQPPS(0.946)PT(0.051)PS(0.003)PPRPTLAR 83.744 7.2158e-07 40646000.0 3299.6 3938.0 3572.8 2598.8 4236.6 3138.9 2742.0 3443.4 4332.4 4447.4 4753.1 True False 3856.491812525201 4138.427379442033 4079.476763790967 3235.506116664565 3613.401752190086 3471.0563145668116 3240.1859069771062 3931.51249497023 3351.1183174211646 3442.729251146556 3572.7740911135247 1.0794110442407654 1.158323273149412 1.141823317051518 0.905600531730277 1.01137146095456 0.9715297486063523 0.9069103795385056 1.1004089244682407 0.9379597567493341 0.9636011579096406 1.0 11.802828978900415 -6.248083066260546 24.815815422343587 0.9743028442054337 1.1296996359812235 0.6100455126782853 0.054051492623608303 338.2191914740102 628404.6831054095 0.007120080501823454 0.018720423994660156 5.648289312695744e-07 6.248083066260546 0.1553967917757898 AATAARPPAPPPAPQPPS(ph)PTPSPPRPTLAR ddPTM_A549_PD325901_60min_R1 2 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 AATAARPPAPPPAPQPPS(0.931)PT(0.064)PS(0.005)PPRPTLAR;AATAARPPAPPPAPQPPS(0.976)PT(0.023)PS(0.001)PPRPTLAR 147.17 1.2784e-36 165066000.0 5858.8 6054.0 6002.1 7004.4 6815.0 7514.099999999999 6728.799999999999 7127.299999999999 7801.3 7095.6 8275.7 True False 6453.581062979396 6564.19182651485 6409.43859955935 7437.045879853419 6336.337910473668 7452.907660891913 6984.868166140641 6985.140410241313 7473.438490751527 6647.5826050573305 7257.8413639846085 0.8891873959940525 0.9044275697576091 0.8831053584836858 1.0246911591038725 0.8730333983209261 1.0268766272400602 0.962389203048921 0.9624267133893953 1.0297054063260145 0.9159173191693678 1.0 12.825324808564778 -6.467656668799792 0.44734320326598814 1.013719383110039 0.8600424888231958 0.1933408387291886 0.05274834467426 1.173034192168291 0.29933715999391813 0.01016958782933371 0.07984380423599596 3.4067740555847785e-07 6.467656668799792 -0.15367689428684328 AATAARPPAPPPAPQPPSPT(ph)PS(ph)PPRPTLAR ddPTM_A549_PD325901_60min_R1 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36-3;Q96B36;H9KV91 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 AATAARPPAPPPAPQPPS(0.414)PT(0.602)PS(0.956)PPRPT(0.028)LAR 58.001000000000005 0.0013474000000000001 56778000.0 2736.3 3417.7 2607.9 2752.6 3582.7 3114.7 2832.6 2749.2 3109.1 3068.4 3995.0 True False 3014.087161642406 3705.721573419192 2784.8877765766674 2922.6218503918276 3331.063511644023 3089.334915875493 2940.3961430581967 2694.365049294323 2978.4353391864934 2874.6607003435784 3503.6403263915454 0.8602729963285536 1.0576775091625268 0.7948554980370566 0.8341672027168046 0.9507435699242388 0.8817500165769722 0.8392402955604057 0.7690187343143444 0.850097344967493 0.820478254771156 1.0 11.774638964291613 -10.710633329479906 1.0447218190243608 0.9976789358485105 0.8716917269311739 0.0 0.09057704310299632 0.5248332296148845 1.0462769861667707 0.04647030390846472 0.013036797933379304 1.947003223375701e-11 10.710633329479906 -0.1259872089173366 AATEALGEKS(ph)PDSATVSGYDIMK ddPTM_A549_MK2206_60min_R1 4 AATEALGEKSPDSATVSGYDIMK 23 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AATEALGEKS(0.991)PDS(0.009)ATVSGYDIMK;AAT(0.007)EALGEKS(0.613)PDS(0.257)AT(0.08)VS(0.01)GY(0.033)DIMK;AATEALGEKS(0.956)PDS(0.02)AT(0.024)VSGYDIMK;AATEALGEKS(0.735)PDS(0.098)AT(0.098)VS(0.037)GY(0.032)DIMK 247.57 6.166399999999999e-100 124703600.0 8301.5 9529.1 9867.3 9702.859999999999 13334.7 10443.199999999999 10091.500000000002 9490.6 13214.8 13598.400000000001 13967.699999999999 True False 9702.590247811242 10014.09048792308 11266.631513478109 12080.061135577937 11373.183294370274 11548.292492364886 11924.994923508195 10835.921613743525 10221.668899699285 10526.511995501036 10499.134601091144 0.9241323800918678 0.953801514925082 1.0731009689414974 1.1505768422401683 1.0832495940368545 1.0999280351320295 1.1358074142862085 1.0320775973876342 0.9735725169803021 1.0026075858106482 1.0 13.357982797139197 -8.566524270697043 5.678378922058063 0.9879279929837407 1.0638570418871647 0.1703231246787824 0.06515405905577634 0.2311682367972306 18.037280535883955 0.01182811450565645 0.013497767007317097 2.7131620219175855e-09 8.566524270697043 0.075929048903424 AATEALGEKS(ph)PDSATVSGYDIMK ddPTM_A549_PD325901_60min_R1 6 AATEALGEKSPDSATVSGYDIMK 23 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AATEALGEKS(0.997)PDS(0.003)ATVSGYDIMK;AAT(0.001)EALGEKS(0.998)PDS(0.001)ATVSGYDIMK;AATEALGEKS(0.984)PDS(0.015)ATVSGYDIMK;AATEALGEKS(0.978)PDS(0.021)AT(0.001)VSGYDIMK;AATEALGEKS(0.73)PDS(0.269)AT(0.001)VSGYDIMK;AATEALGEKS(0.717)PDS(0.273)AT(0.01)VSGYDIMK 198.79 3.2216999999999994e-61 142258300.0 19705.500000000004 18666.4 22484.6 21192.200000000004 23058.300000000003 23803.4 20883.100000000002 23747.300000000003 23369.699999999997 24143.4 25611.3 True False 21705.987853577615 20239.483037736492 24010.540166883613 22501.19406302177 21438.76455481657 23609.553002392127 21677.817798170792 23273.641472103547 22387.552779320886 22618.981603661574 22461.2724634072 0.9663739171028686 0.9010835459437867 1.0689750639016735 1.0017773525377784 0.9544768485286642 1.0511226842048085 0.9651197559482538 1.03616754171073 0.9967179204024876 1.007021380489966 1.0 14.455152040353262 -5.743257895512017 24.999986539647065 1.0030417479515554 0.933728736501245 0.3944568594487673 0.03535667186202082 172.4671338562398 237142.72468522805 0.004213107851203818 0.016248335581728623 1.8061012969436597e-06 5.743257895512017 -0.06931301145031044 AATEALGEKSPDS(ph)ATVSGYDIMK ddPTM_A549_PD325901_60min_R1 1 AATEALGEKSPDSATVSGYDIMK 23 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AATEALGEKS(0.361)PDS(0.524)AT(0.114)VSGYDIMK 161.5 9.7537e-34 79314000.0 15111.0 14966.0 13988.0 14398.0 17208.0 16638.0 15660.0 16262.0 15053.0 18508.0 18542.0 True False 16645.057595869745 16227.237343181574 14937.309796677187 15287.331759769493 15999.369444377244 16502.505644311314 16255.949869480806 15937.641652707787 14420.374758217586 17339.401721404964 16261.451547422294 1.0235899020040593 0.9978959932241631 0.9185717371611266 0.9400963816291532 0.9838832282419097 1.014823651885322 0.9996616736257865 0.980087269960483 0.8867827522139898 1.0662886809851573 1.0 13.989168422128458 -8.583869057460502 24.99994378356779 0.9458467390978217 0.9810934985708732 0.0 0.05230650678717697 127.26740718253915 52166.01860680636 0.008424644818629461 0.009552649475896896 2.606939440285394e-09 8.583869057460502 0.03524675947305156 AATESVPCS(ph)PSPLAGEIR ddPTM_A549_MK2206_60min_R1 1 AATESVPCSPSPLAGEIR 18 0 Q8N9M1-2;Q8N9M1;J3QKZ5;J9JIE4;J3QS16 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 AATES(0.021)VPCS(0.685)PS(0.294)PLAGEIR 131.51 1.4672e-12 3964800.0 1703.1 2137.9 2757.5 2044.3 2918.9 2448.0 2217.0 2401.7 3548.7 3190.9 3122.8 True False 1990.5416432027139 2246.7099782907903 3148.554964216745 2545.1535917721144 2489.5336766434502 2707.045735149113 2619.8002026871777 2742.148329897774 2744.9251161094276 2470.073473823704 2347.322575104524 0.8480051546021864 0.9571372942599279 1.3413388503182366 1.084279433413101 1.0605843879521304 1.1532482854550024 1.1160801802328002 1.168202597708868 1.1693855566430613 1.052294005102266 1.0 11.196800399009518 -5.533559052331921 24.88656603753885 1.1080808513682476 0.8752880777718033 0.5068012367092175 0.08646948688829344 113.15256520041433 263661.5500358474 0.01293638464547041 0.05020189032363327 2.927122834579569e-06 5.533559052331921 -0.23279277359644435 AATESVPCS(ph)PSPLAGEIR ddPTM_A549_PD325901_60min_R1 2 AATESVPCSPSPLAGEIR 18 0 Q8N9M1-2;Q8N9M1;J3QKZ5;J9JIE4;J3QS16 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 AATES(0.01)VPCS(0.79)PS(0.2)PLAGEIR;AAT(0.001)ES(0.028)VPCS(0.956)PS(0.016)PLAGEIR 98.507 1.0311e-06 14358500.0 6555.3 6550.3 6567.7 6323.5 7435.3 6601.0 7443.9 7089.099999999999 6123.0 7218.5 8390.5 True False 7220.789230243199 7102.3167692798515 7013.423616788445 6714.088233289516 6913.070178392496 6547.243644554578 7727.181687958373 6947.702339208633 5865.671603306065 6762.722678083085 7358.521691761772 0.9812825908126668 0.9651825552449272 0.9531022548510414 0.9124235158274072 0.9394645375758041 0.889749859932402 1.050099736283897 0.9441709395226664 0.7971263589360582 0.919032784214564 1.0 12.845200246300127 -8.547012866722538 24.996546370437112 0.9024327784326405 0.9545753448749947 0.12579831949891074 0.05803188060913897 451.9737832052003 468122.7169811769 0.0134609539035205 0.015263664623643076 2.8378349514446224e-09 8.547012866722538 0.052142566442354266 AATS(ph)PAPGPSDATAR ddPTM_A549_MK2206_60min_R1 2 AATSPAPGPSDATAR 15 0 Q8IXZ2;Q8IXZ2-2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 AAT(0.058)S(0.942)PAPGPSDATAR;AAT(0.071)S(0.929)PAPGPSDATAR 136.51 1.0714999999999999e-09 10101100.0 1434.75 1708.97 1117.12 1232.42 2028.4299999999998 1571.28 1013.8599999999999 1226.53 2266.2 1985.65 2515.5 True False 1676.9007237303106 1795.9492733989475 1275.544414007548 1534.3629553254368 1730.0506340449724 1737.55180666875 1198.0652383835913 1400.3943835905902 1752.9093183777684 1537.0902859061825 1890.8319257318522 0.8868586895058169 0.949819626460887 0.6745942865936352 0.8114750626138053 0.9149679622504528 0.9189350904344528 0.6336180503827048 0.7406234073652862 0.9270571828848826 0.8129174597637742 1.0 10.884805413846248 -8.948232811839606 4.6456034553209085 0.9691519498370786 0.8166043589592277 0.08894238948196387 0.10790219297875708 0.17986838983595949 7.635260187834699 0.018069634938491688 0.01880549995276145 1.1265933624144079e-09 8.948232811839606 -0.15254759087785097 AATS(ph)PAPGPSDATAR ddPTM_A549_PD325901_60min_R1 1 AATSPAPGPSDATAR 15 0 Q8IXZ2;Q8IXZ2-2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 AAT(0.097)S(0.903)PAPGPSDATAR 116.84 9.0001e-07 5014600.0 978.54 711.12 951.83 897.61 758.98 712.96 649.07 692.68 728.88 1030.7 789.18 True False 1077.8806604369252 771.0485780758574 1016.4269076187627 953.0533310797825 705.6718631388562 707.1538901411343 673.7707140347327 678.863954003052 698.2477083484775 965.6214260996372 692.1158630242005 1.5573702583944908 1.1140455222435741 1.4685791236997299 1.3770141417008066 1.0195863161630523 1.0217276151585735 0.9734941070281085 0.9808530482696288 1.0088595647807925 1.395173088332861 1.0 9.434869760900366 -6.770990330570754 7.5934567077920265 1.0020741578442873 1.36724835394836 0.4758510030337604 0.15582227253455172 0.04478668014547054 15.326198185501529 0.012777599887505242 0.025067448159612118 1.6943755247623917e-07 6.770990330570754 0.36517419610407265 AATS(ph)PGVGQSAPGTR ddPTM_A549_PD325901_60min_R1 2 AATSPGVGQSAPGTR 15 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 AAT(0.095)S(0.905)PGVGQSAPGTR;AAT(0.084)S(0.916)PGVGQSAPGTR 208.81 2.5768e-45 28237000.0 5815.700000000001 5894.0 5481.7 5695.5 6451.5 5357.9 5187.7 5736.0 6647.8 5970.0 6346.6 True False 6406.105582707943 6390.708064994801 5853.721126139929 6047.298099580998 5998.3688964667435 5314.267038806081 5385.120762318362 5621.5909801950465 6368.4160843472255 5593.0531811534265 5566.008434412165 1.1509335025620566 1.148167154308262 1.0516910269034023 1.0864694458946975 1.077678729227481 0.9547716467604183 0.9675013657946591 1.009986069269899 1.144162133311572 1.0048589122815652 1.0 12.442427379511159 -5.7592012534464825 9.082928970755807 1.0522402140279505 1.1497905099333916 0.3591927456869396 0.055360140549696846 0.11239058504661663 111.71367929680791 0.009416965464499253 0.03289156066590053 1.7409999015285707e-06 5.7592012534464825 0.09755029590544106 AATTATPAATT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 AATTATPAATTSPK 14 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 AATTATPAAT(0.002)T(0.878)S(0.12)PK 170.95 1.5368e-22 4573900.0 3473.6 3413.0 2977.4 2524.5 4709.2 3523.0 3585.2 3757.6 5515.4 4561.8 3908.4 True False 4059.858758633638 3586.7071218983388 3399.640090828266 3143.002613329112 4016.482918239519 3895.8015216218655 4236.584432419519 4290.251307167374 4266.170706283972 3531.2862116923047 2937.8364136475325 1.381921314533996 1.220866861489128 1.1571917602475936 1.0698358147950284 1.3671567618881715 1.326078437697949 1.4420763568518433 1.460343839172693 1.452147126526769 1.2020023290908708 1.0 11.520538349790442 -10.926464244597842 1.2124215188603948 1.0019542531486412 1.3257667275092606 0.24813758565173671 0.13221910531884068 0.35262577412737744 0.92986928400064 0.09335549510354423 0.02257228776863473 1.1845018828523294e-11 10.926464244597842 0.32381247436061944 AATTATPAATTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AATTATPAATTSPK 14 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 AATTATPAATT(0.127)S(0.872)PK 156.08 5.9317e-19 6605000.0 3752.4 3670.0 4024.0 3899.9 5630.0 4373.0 3815.0 4039.9 6028.5 6146.3 6290.1 True False 4385.713382628066 3856.787324162587 4594.663708434518 4855.375675073166 4801.834458015901 4835.74795743753 4508.136117840136 4612.568196674865 4663.054375536305 4757.846561209259 4728.094572071527 0.9275857992634329 0.8157170431709041 0.9717791466301935 1.02692016859254 1.0155961106150349 1.0227688731105133 0.953478414850103 0.9755659761801155 0.9862438884113255 1.0062925960308564 1.0 12.20704317747323 -5.891366537764521 6.33569579730354 0.9948192174465446 0.8728629863691533 0.7009456283693644 0.03145830851431831 0.07356064658349912 3.8310678217389778 0.003951727932323845 0.012567903118128696 1.2842023556948951e-06 5.891366537764521 -0.12195623107739129 AAVAGEDGR ddPTM_A549_MK2206_60min_R1 2 AAVAGEDGR 9 0 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;G3V555;A0A0G2JNQ3;G3V5X6;G3V3K6;G3V251;B4DSU6;P07910-2;P07910;B2R5W2;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 127.56 0.00014376 15494800.0 6095.4 6891.5 6288.5 5186.5 5615.6 4430.7 3881.4 3902.3 5351.4 9215.400000000001 8870.5 False True 7124.154501777832 7242.247914023565 7180.303859465827 6457.192732830834 4789.55267894034 4899.553733139368 4586.6001383446155 4455.462975292542 4139.316444429788 7133.634739626741 6667.7100366544955 1.0684559560349982 1.0861671959654295 1.0768770417419837 0.9684273457204374 0.7183204807363646 0.7348180569048418 0.6878823633797263 0.6682148669932351 0.6208003080029975 1.0698777691907584 1.0 12.70297565086756 -6.575272988495584 3.81282741281054 0.7827983981804647 1.0732302900873758 0.4998609277222237 0.1299101469818468 0.16396149991267955 4.9374601202668 0.02167704388498572 0.04816517224895833 2.6590531087934636e-07 6.575272988495584 0.2904318919069111 AAVAGEDGR ddPTM_A549_PD325901_60min_R1 1 AAVAGEDGR 9 0 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;G3V555;A0A0G2JNQ3;G3V5X6;G3V3K6;G3V251;B4DSU6;P07910-2;P07910;B2R5W2;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 0 141.52 0.00010889 19497000.0 5434.2 5633.0 6018.1 4939.1 6208.5 5526.7 5887.0 5549.0 5828.3 6719.0 6716.3 False True 5985.875983553399 6107.712679015219 6426.524455775164 5244.176989490037 5772.436378162255 5481.692387571543 6111.0330064900045 5438.320841893711 5583.356819459208 6294.761193328286 5890.237678133556 1.0162367480984482 1.0369212606970002 1.0910467127043915 0.8903167030013233 0.9800005863246203 0.9306402707519488 1.0374849607811432 0.9232769777835104 0.9479000890212652 1.068676942646381 1.0 12.524110134362367 -6.24550611428389 24.998489720219492 0.9681921927791474 1.046953539137414 0.29979803430158536 0.051294262030687585 600.5187305333964 942182.1921424499 0.005646155255086369 0.014884509179227824 5.681903921448517e-07 6.24550611428389 0.0787613463582667 AAVGEEKDINTFVGT(ph)PVEK ddPTM_A549_MK2206_60min_R1 2 AAVGEEKDINTFVGTPVEK 19 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AAVGEEKDINT(0.004)FVGT(0.996)PVEK;AAVGEEKDINT(0.004)FVGT(0.996)PVEK 186.91 6.0175e-44 83140000.0 8073.3 8818.8 8934.8 8375.599999999999 10670.8 7978.6 8722.3 7857.0 12392.5 12693.400000000001 12535.7 True False 9435.875666765582 9267.639251859684 10201.888991580703 10427.62237599497 9101.139455523284 8822.890156233952 10307.02900672006 8970.753811053351 9585.61853675602 9825.952124050831 9422.739722280572 1.0013940684845564 0.9835397692186971 1.0826881875403807 1.1066444243746114 0.9658697707635023 0.936340216993552 1.0938463027211225 0.9520324316972827 1.01728571724106 1.042791418807509 1.0 13.20193087837194 -6.791905899671095 24.99997582438249 1.002646702587501 1.042073557237502 0.1342215542463474 0.051664263746069757 322.9130452727185 264972.44970423996 0.007068741503096445 0.013359861241837592 1.61470838427386e-07 6.791905899671095 0.03942685465000095 AAVGEEKDINTFVGT(ph)PVEK ddPTM_A549_PD325901_60min_R1 4 AAVGEEKDINTFVGTPVEK 19 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AAVGEEKDINT(0.002)FVGT(0.998)PVEK;AAVGEEKDINTFVGT(1)PVEK;AAVGEEKDINTFVGT(1)PVEK;AAVGEEKDINT(0.001)FVGT(0.999)PVEK 185.84 6.888899999999999e-44 143826000.0 17827.3 16450.4 16809.1 17818.9 20967.4 19468.899999999998 19542.7 21706.9 22542.4 18750.8 20474.2 True False 19637.11437223537 17836.732940683814 17949.86660732961 18919.532983341916 19494.722157603155 19310.351733293228 20286.408142675766 21273.93885076637 21595.021321307646 17566.87128796845 17956.003196647267 1.0936239071232734 0.993357638965796 0.999658243025998 1.053660593403913 1.0856938453454494 1.0754259465101257 1.1297841685873409 1.1847814136465864 1.2026630361337791 0.9783285899196389 1.0 14.132178637753746 -6.819446515109931 1.7737591470809655 1.1070243125081385 1.0256013104372452 0.14066430475747893 0.0681828779314736 0.5102819171291594 3.253394279227331 0.012335206683259553 0.028744152252550736 1.515491430296491e-07 6.819446515109931 -0.08142300207089326 AAVGQES(ph)PGGLEAGNAK ddPTM_A549_MK2206_60min_R1 2 AAVGQESPGGLEAGNAK 17 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK 221.79 1.9287999999999997e-63 102328000.0 7026.0 7354.299999999999 7082.700000000001 6941.5 9304.5 7107.7 6921.4 6967.2 11093.3 11025.8 11334.7 True False 8211.817030792243 7728.602457244933 8087.133361761727 8642.167811615776 7935.820375596614 7859.832096290587 8178.928787947241 7954.821936155133 8580.685262359933 8535.064122249329 8519.981168194328 0.9638304203590868 0.9071149694668732 0.949196154558598 1.014341187029565 0.9314363751438294 0.9225175433053628 0.9599702894273688 0.9336666101858331 1.007124909429638 1.0017703036846262 1.0 13.056634526312417 -8.767935236693553 24.943228197664347 1.003364545067212 0.947693238046896 0.4658183565274445 0.02632798350278576 91.13537809626911 349946.84986833925 0.0045119767967216765 0.004858916530837624 1.7063368241387573e-09 8.767935236693553 -0.055671307020315974 AAVGQES(ph)PGGLEAGNAK ddPTM_A549_PD325901_60min_R1 2 AAVGQESPGGLEAGNAK 17 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK 274.82 1.3351999999999998e-101 349670000.0 34687.0 33520.0 35174.0 35969.0 39474.0 36715.0 38251.0 39101.0 38015.0 40348.0 41683.0 True False 38208.398704780215 36344.84803845022 37561.11915844464 38190.72343847403 36701.48241790718 36416.00521281944 39706.66273675034 38321.09988085888 36417.3617507235 37800.42039416725 36556.255250307586 1.0451945485980467 0.9942169346830023 1.0274881521987569 1.0447110399294164 1.003972703620904 0.996163446268557 1.0861797102813546 1.0482775004843101 0.9962005544979087 1.0340342613142575 1.0 15.157830670719134 -8.782116121696358 24.536731653204303 0.9982058106095085 1.0297114698089556 0.05683927013313672 0.02753799155825827 202.01092202098803 239721.3829237915 0.004431521571323864 0.004720238876960028 1.651520155585527e-09 8.782116121696358 0.031505659199447034 AAVHLEGK ddPTM_A549_PD325901_60min_R1 2 AAVHLEGK 8 0 P18206;P18206-2 P18206 VCL Vinculin 0 ; 61.998999999999995 0.011359999999999999 2860900.0 1116.2 900.46 1107.6 1030.5 1084.2 1110.0 1105.2 1057.8 1066.8 1268.8 856.79 False True 1229.5158022969897 976.3449243646445 1182.7683965398671 1094.1516445646942 1008.0495322869481 1100.9605280193275 1147.2589907886454 1036.7013491719538 1021.9661058969315 1188.6877514652372 751.4102616393027 1.6362776302983078 1.2993500012025607 1.5740647378963106 1.456130825492927 1.3415434733187597 1.4651922980362737 1.5268077232346353 1.3796741967700177 1.3600640795979746 1.5819423983802867 1.0 9.553457008063491 -10.38407917980838 0.4226212737236428 0.910586190242102 1.4791179046210656 0.0 0.19545348392948675 0.538527464311846 0.1480412430076241 0.1306231222024249 0.02622375815320138 4.129722027583222e-11 10.38407917980838 0.5685317143789637 AAVIGDVIR ddPTM_A549_MK2206_60min_R1 2 AAVIGDVIR 9 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ; 96.25299999999999 0.0024833999999999998 2492100.0 1064.47 1203.13 1215.13 895.72 1655.38 1267.04 1051.35 1046.98 1604.93 1634.4 1586.6 False True 1244.126512207148 1264.3641780162766 1387.4537057728724 1115.1714402103983 1411.875794868626 1401.117331806917 1242.3666861051713 1195.3926212417762 1241.415917546567 1265.1879048599017 1192.6034320676433 1.0432021900609307 1.0601715071574296 1.1633822848953341 0.9350731435318784 1.1838602480128915 1.1748392584933018 1.0417265728904137 1.0023387398519366 1.0409293518418745 1.0608622035125432 1.0 10.219898678322691 -7.985896021101736 24.941006395501187 1.0187573728097776 1.0933599619486172 0.17980163709582786 0.06828424529908295 264.3156333239036 467405.73272972327 0.010123309783854955 0.013984484233202418 1.0330086993692177e-08 7.985896021101736 0.07460258913883955 AAVIGDVIR ddPTM_A549_PD325901_60min_R1 1 AAVIGDVIR 9 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 81.548 0.0043883 1269600.0 945.16 992.77 657.8 828.94 855.47 1042.4 709.9 972.29 968.45 1019.1 967.76 False True 1041.1119474099826 1076.4342120266176 702.4422636727376 880.1417411406674 795.3847384112851 1033.9110400066188 736.9156329721856 952.8969132032511 927.7494143755941 954.7538520793058 848.7316551360908 1.2266679828773965 1.268285689019123 0.8276376395553476 1.03700826499695 0.9371451313239262 1.2181836670635728 0.8682551528657477 1.12273049725058 1.0931009922409847 1.1249183959401334 1.0 9.729164676416088 -5.718066926096473 24.99940074982267 1.0315335898324505 1.2474775942863252 0.3735989788717726 0.11065896195897307 99.44761973367082 57319.123176445726 0.013377155565758197 0.05180886491801975 1.913960955107344e-06 5.718066926096473 0.21594400445387474 AAVLS(ph)DS(ph)EDEEK ddPTM_A549_MK2206_60min_R1 2 AAVLSDSEDEEK 12 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 AAVLS(1)DS(1)EDEEK;AAVLS(1)DS(1)EDEEK 59.57 0.011195 1810600.0 1238.9 1197.0300000000002 1153.6100000000001 1326.03 1456.13 1724.01 1236.0900000000001 1460.18 1703.9499999999998 1721.8600000000001 1666.2 True False 1447.9960318030899 1257.9537140714829 1317.2092447035657 1650.9074095277485 1241.9352059237474 1906.4435938947818 1460.6715527918777 1667.1649866137038 1318.008045649015 1332.8906301162942 1252.4365552194051 1.1561432200048058 1.0044051403874197 1.0517173418599344 1.3181565187056827 0.9916152644603877 1.5221877594915822 1.166263909101562 1.3311372777055726 1.052355139393167 1.064238044283844 1.0 10.290521807213386 -8.943428393615221 11.717838849684632 1.0230631232636236 1.1895319691875126 0.1749885205494237 0.1488062440189259 0.7732104714872792 158.14171017852848 0.024959546411279915 0.02651937630972692 1.139125585184798e-09 8.943428393615221 0.166468845923889 AAVLS(ph)DS(ph)EDEEK ddPTM_A549_PD325901_60min_R1 2 AAVLSDSEDEEK 12 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 AAVLS(1)DS(1)EDEEK;AAVLS(1)DS(1)EDEEK 96.745 0.00029443 3998000.0 1926.31 1730.21 1625.3400000000001 1680.25 2041.43 1550.17 1725.5900000000001 1634.69 1571.65 1853.3000000000002 1967.1 True False 2121.867573125527 1876.020868872523 1735.6453463634061 1784.035226375379 1898.0469993511747 1537.5459294772247 1791.2582717290804 1602.0848255605028 1505.5990160600982 1736.2823217138427 1725.1591704742964 1.2299546670480057 1.0874479879771037 1.0060783816754872 1.0341278978245791 1.1002155811682852 0.8912487356482641 1.038314784157923 0.9286591364900221 0.8727304945700548 1.0064476086786174 1.0 10.752513761834097 -2.000000000000007 0.40169920073041965 0.9424295992393082 5.5054853239456785 0.5858382783985088 0.062252841515273806 31.1476102516667 0.3613143820079797 0.014925346302243053 114.03536550579248 0.009999999999999837 2.000000000000007 4.56305572470637 AAVLS(ph)DS(ph)EDEEKASAK ddPTM_A549_PD325901_60min_R1 1 AAVLSDSEDEEKASAK 16 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 AAVLS(1)DS(0.999)EDEEKAS(0.001)AK 89.541 3.5874e-05 7854900.0 1189.8 1299.7 1134.8 1399.2 1672.5 1666.9 1230.6 1481.5 1503.1 1752.3 1509.2 True False 1310.5876201155331 1409.230280297546 1211.8143521067548 1485.6254061862396 1555.0293698117687 1653.325319058934 1277.4311564101592 1451.9503202857331 1439.9299341710512 1641.6594789506119 1323.57796760704 0.990185430847725 1.0647127066079538 0.915559477238543 1.1224313508876043 1.1748679774589939 1.2491333034562824 0.9651347995159577 1.0969888860501236 1.0879071497196116 1.2403194365033492 1.0 10.370227466399022 -6.2764105318383825 24.94752282911455 1.0695379022714337 0.9976085438992852 0.14043232858670507 0.09696748432954437 1272.3471799702463 2120202.056913351 0.012579524080174525 0.02933296624348688 5.291629978217795e-07 6.2764105318383825 -0.07192935837214853 AAVLSDS(ph)EDEEK ddPTM_A549_PD325901_60min_R1 1 AAVLSDSEDEEK 12 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 AAVLS(0.025)DS(0.975)EDEEK 170.18 1.1995999999999998e-15 7835000.0 3127.3 3633.3 3206.4 3476.6 3550.1 2992.9 2803.6 3191.5 3713.7 3671.6 4161.8 True False 3444.781193803418 3939.490942067459 3424.005585649539 3691.3416860685284 3300.7532231801265 2968.5268146928333 2910.292532188787 3127.843028816684 3557.626103739628 3439.774549400826 3649.9249838238666 0.9437950667672275 1.079334769762919 0.9381030023423546 1.0113472749243386 0.9043345377805743 0.8133117332134421 0.7973568073554763 0.856960908149893 0.9747121158672305 0.9424233551773233 1.0 11.833651097537631 -4.902479597727984 13.767261129944455 0.9559331151176722 0.6772656157137928 0.0 0.08476646046593907 3096195.215221276 6903525.601500845 0.01282001047999116 25749363.65769152 1.2517580767006047e-05 4.902479597727984 -0.27866749940387936 AAVLSDS(ph)EDEEKASAK ddPTM_A549_MK2206_60min_R1 2 AAVLSDSEDEEKASAK 16 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 AAVLSDS(1)EDEEKASAK;AAVLS(0.004)DS(0.996)EDEEKASAK 165.74 1.3684e-21 26569000.0 17065.1 19157.7 16270.3 14871.900000000001 21635.5 16073.5 15727.8 13619.9 24343.6 24442.8 24763.9 True False 19945.271678362184 20132.74510084731 18577.67319466753 18515.51616762495 18452.946610373554 17774.387101274217 18585.33767605926 15550.562534194416 18829.81346874107 18921.15450373814 18614.340181129402 1.0715003316949174 1.0815717830953373 0.9980301753322934 0.9946909741337684 0.9913296109781283 0.9548760218368254 0.9984419267732334 0.8354076686510252 1.0115756607816864 1.0164826859089948 1.0 14.184126857716661 -5.796791139976782 5.162277564824529 0.9880744378764968 1.0772597797302765 0.3650251857607345 0.04877653469531949 0.15082274756277306 9.744275910471695 0.0067978385277804795 0.023347816083677083 1.596646818784865e-06 5.796791139976782 0.08918534185377969 AAVLSDS(ph)EDEEKASAK ddPTM_A549_PD325901_60min_R1 2 AAVLSDSEDEEKASAK 16 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 AAVLS(0.038)DS(0.962)EDEEKASAK;AAVLS(0.003)DS(0.997)EDEEKASAK 187.47 8.858799999999999e-35 41603000.0 12762.3 14012.0 14299.2 15551.099999999999 16856.2 16639.6 14135.1 14414.9 17004.7 16928.1 18675.2 True False 14057.919300891295 15192.840415118275 15269.629700074815 16511.656127889386 15672.278662733128 16504.09261444179 14673.018965523504 14127.38351122972 16290.051594437155 15859.256877032376 16378.268791846673 0.8583275485068068 0.9276218755599785 0.9323103616223618 1.0081441657685528 0.9568947037024452 1.0076823640028276 0.8958833898749992 0.8625687910472275 0.9946137654393953 0.9683109416867876 1.0 13.999495249506804 -2.0000000000000537 0.10516231478516114 1.0330724406139196 0.6564012101993381 0.11493509066069219 0.05013788131203433 110.0246220026646 0.7874265695259381 0.29041070952659465 6.023992525301431 0.009999999999998763 2.0000000000000537 -0.3766712304145815 AAVLSDS(ph)EDEEKASAKK ddPTM_A549_PD325901_60min_R1 1 AAVLSDSEDEEKASAKK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 AAVLS(0.034)DS(0.928)EDEEKAS(0.038)AKK 57.989 0.0014140000000000001 6985100.0 1575.0 1365.8 1386.4 1767.2 2021.4 2412.7 2119.2 1893.0 1900.7 1704.3 2241.9 True False 1734.8928405462811 1480.900759275516 1480.489441100461 1876.3559303976006 1879.423837451427 2393.051771128136 2199.8473156707364 1855.2426299702288 1820.8201888622955 1596.6902071423424 1966.1605125750214 0.8823759959832294 0.7531942330262877 0.7529850343507857 0.9543248978895388 0.9558852522116834 1.2171192310204766 1.118854387320424 0.943586557712154 0.9260791157267328 0.8120853800746946 1.0 10.941165389272062 -6.374446389837295 4.136577548480861 0.9922708115358181 0.7923665658596692 0.4134709715877761 0.10392408984796735 0.16251322163664164 4.732536968592991 0.013890982943879006 0.033736192433067774 4.2223439727648246e-07 6.374446389837295 -0.19990424567614884 AAVPSGASTGIY(ph)EALELR ddPTM_A549_MK2206_60min_R1 2 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;E5RGZ4;K7EKN2;K7EPM1;A0A2R8Y798;E5RG95;A0A2R8YEG5;P13929-3;P13929-2;P13929;E5RI09;F5H1C3;F5H0C8;P09104-2;P09104 P06733;F5H0C8 ENO1;ENO3;ENO2 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase 1 AAVPSGAS(0.002)T(0.01)GIY(0.987)EALELR;AAVPSGASTGIY(1)EALELR 101.39 7.986e-09 5224800.0 1886.7 1786.24 1539.71 1590.29 2700.0 2169.3 2148.38 2171.4 3193.5 2672.3 2641.5 True False 2205.1288346136807 1877.1519863520916 1758.0640304457538 1979.9111213908309 2302.8335766683726 2398.853886135202 2538.7128369188445 2479.202599633605 2470.1773489715843 2068.625574007046 1985.5426483087601 1.1105925307078945 0.945410056012147 0.8854325198923492 0.9971637340941903 1.159800610996633 1.208160342553453 1.2785989961390465 1.248627221251245 1.244081738095943 1.0418439391211536 1.0 10.95531763411311 -6.720912239445613 5.400927772706503 1.150385021220199 0.9723798491111857 0.454684681552462 0.09550558797068927 0.17772019494791236 12.357327392027635 0.01723787669283279 0.035808912271020656 1.9014624813097502e-07 6.720912239445613 -0.17800517210901323 AAVPSGASTGIY(ph)EALELR ddPTM_A549_PD325901_60min_R1 2 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;E5RGZ4;K7EKN2;K7EPM1;A0A2R8Y798;E5RG95;A0A2R8YEG5;P13929-3;P13929-2;P13929;E5RI09;F5H1C3;F5H0C8;P09104-2;P09104 P06733;F5H0C8 ENO1;ENO3;ENO2 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase 1 AAVPSGAS(0.001)T(0.062)GIY(0.937)EALELR;AAVPSGAST(0.001)GIY(0.999)EALELR 176.91 1.1685999999999998e-30 16117900.0 1952.28 2423.1 2228.2799999999997 2392.8 2399.4 2808.8999999999996 2825.7 2559.6000000000004 2523.3 2866.7 2457.1 True False 2150.4740284074255 2627.3031408701895 2379.5044805361617 2540.597821556916 2230.8744214806334 2786.0252496878256 2933.23355978237 2508.546770032644 2417.254476012117 2685.6960727659157 2154.892276840219 0.997949666217528 1.2192271368305614 1.104233611169324 1.1789906385864766 1.0352602983717725 1.292883769472252 1.3611973049917165 1.1641170173531825 1.1217518861576723 1.2463249795038616 1.0 11.073400035390447 -9.803930462608651 0.9524100574604341 1.0179157054997827 1.1710362489128958 0.0 0.12068462950338642 0.46550627908673853 0.8707689820568941 0.034159553490271284 0.02009206294634484 1.570614264299398e-10 9.803930462608651 0.1531205434131131 AAVPSGASTGIYEALELR ddPTM_A549_MK2206_60min_R1 2 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;E5RGZ4;K7EKN2;K7EPM1;A0A2R8Y798;E5RG95;A0A2R8YEG5;P13929-3;P13929-2;P13929;E5RI09;F5H1C3;F5H0C8;P09104-2;P09104 P06733;F5H0C8 ENO1;ENO3;ENO2 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase 0 ; 188.09 1.8646e-39 13126300.0 2316.3 2156.14 2376.1 2071.7 3387.0 2876.4 2261.84 2864.13 3824.8 3226.8 3328.0 False True 2707.234811902087 2265.8783163814496 2713.066709147929 2579.266593002147 2888.77678673177 3180.77873880021 2672.787050268817 3270.129198530257 2958.4889069505275 2497.863638890072 2501.5657518726316 1.0822161319867347 0.9057840333340228 1.0845474307908842 1.0310608829975185 1.1547874704349779 1.2715151446325688 1.0684456517954852 1.3072329584310511 1.1826548651522955 0.9985200816809279 1.0 11.288615657701838 -6.689519820529123 6.528802129724158 1.1218839700287855 1.0202800675976038 0.21094720465100292 0.10251283643614156 0.3234638877499186 23.23253933776115 0.016008982317933303 0.033434847578452366 2.0439966490247922e-07 6.689519820529123 -0.10160390243118167 AAVPSGASTGIYEALELR ddPTM_A549_PD325901_60min_R1 2 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;E5RGZ4;K7EKN2;K7EPM1;A0A2R8Y798;E5RG95;A0A2R8YEG5;P13929-3;P13929-2;P13929;E5RI09;F5H1C3;F5H0C8;P09104-2;P09104 P06733;F5H0C8 ENO1;ENO3;ENO2 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase 0 ; 218.16 1.6907e-55 27123000.0 3642.6 4193.9 3877.0 4227.9 4609.6 4975.6 4536.6 4002.8999999999996 4626.0 4330.3 4977.200000000001 False True 4012.39407045961 4547.33467149333 4140.116534294932 4489.047780742429 4285.837598256701 4935.080363254923 4709.242795522776 3923.0590192857003 4431.585307348339 4056.88411898638 4365.035953070341 0.9192121470700179 1.0417633944789757 0.948472493424206 1.028410264887935 0.981856196451731 1.130593290940391 1.0788554426935069 0.8987460954419502 1.0152460036969884 0.9294045140986277 1.0 12.091777821472741 -5.248140632572923 23.38235406828271 1.0104289583471606 0.9192119993427558 0.12778745446120632 0.06342627990765362 1145.2578163691396 2013546.068824042 0.007565173224180101 0.1794179278714971 5.647540674037273e-06 5.248140632572923 -0.09121695900440485 AAVPSIK ddPTM_A549_MK2206_60min_R1 2 AAVPSIK 7 0 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ; 91.041 0.034494 8918600.0 8829.099999999999 10195.0 10400.599999999999 9267.7 15136.099999999999 11570.4 12201.2 10539.4 15965.6 13679.900000000001 13596.8 False True 10319.236229229682 10713.881953634225 11875.561472650123 11538.286916042867 12909.59974067042 12794.772048190085 14418.000105109058 12033.392225558817 12349.417091824236 10589.601088896827 10220.339307410391 1.0096764812639425 1.0482902408011037 1.1619537390543961 1.1289534103507581 1.2631282927475944 1.251893079412057 1.4107163834233074 1.177396548550384 1.2083177202218842 1.0361300902425712 1.0 13.319155472986669 -4.169756301653456 15.91136597358772 1.140412870369767 1.1446165911989554 0.0 0.12183981477594309 0.0 0.0 0.01805778883057046 0.0 6.7646245647044e-05 4.169756301653456 0.0042037208291885175 AAVPSIK ddPTM_A549_PD325901_60min_R1 2 AAVPSIK 7 0 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ; 94.262 0.033362 18778800.0 15689.7 16415.2 15060.099999999999 16270.5 18997.9 17866.0 15843.1 18170.699999999997 19825.7 16323.300000000001 16898.1 False True 17282.506793853318 17798.566513149402 16082.168949738218 17275.49183201346 17663.55304319703 17720.505219453415 16446.017840176977 17808.271133861603 18992.494774728908 15292.644052248188 14819.740825881609 1.1661814465520657 1.2010038989390077 1.0851855736675144 1.1657080940203124 1.1918935189709194 1.1957365130506081 1.1097372102118812 1.201658743097635 1.2815672688121431 1.0319103574025186 1.0 13.85523259693106 -11.016407242325775 1.3148365780863043 1.0004327958283505 1.186588133903061 0.6055792117524534 0.049800904123521256 0.24575202725132592 0.7595333545162845 0.04031768100390721 0.00921549817341302 9.6292565502072e-12 11.016407242325775 0.18615533807471052 AAVQELSS(ph)SILAGEDPEER ddPTM_A549_MK2206_60min_R1 2 AAVQELSSSILAGEDPEER 19 0 P49768;P49768-2;P49768-7;E7ES96 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin 1 AAVQELS(0.399)S(0.52)S(0.081)ILAGEDPEER;AAVQELS(0.124)S(0.858)S(0.018)ILAGEDPEER 153.95 5.847299999999999e-23 8161400.0 821.02 1363.5500000000002 1105.71 678.26 1580.97 1496.5900000000001 1494.31 1174.06 1996.38 1629.0 1830.69 True False 959.5881039881934 1432.9488708070571 1262.5163044366634 844.4337304482483 1348.4114072982948 1654.9581604439593 1765.8067843380588 1340.4866004079536 1544.2031175637667 1261.007768610365 1376.0791485263549 0.6973349643556606 1.0413273628494437 0.9174736102852034 0.6136520063926219 0.9798937864455766 1.2026620432525674 1.2832160026762005 0.9741348103729953 1.1221760893749868 0.9163773537014787 1.0 10.4263477371894 -6.993650795484692 24.98105494880537 1.0803823017209795 0.8351068848789738 0.43330670554751693 0.14136431374940342 121.69768609453173 478816.18427337223 0.01931325051065341 0.036435283457244554 1.0147269724709858e-07 6.993650795484692 -0.2452754168420057 AAVQELSS(ph)SILAGEDPEER ddPTM_A549_PD325901_60min_R1 3 AAVQELSSSILAGEDPEER 19 0 P49768;P49768-2;P49768-7;E7ES96 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin 1 AAVQELS(0.001)S(0.688)S(0.311)ILAGEDPEER;AAVQELS(0.039)S(0.957)S(0.004)ILAGEDPEER;AAVQELS(0.013)S(0.975)S(0.013)ILAGEDPEER 343.47 8.611899999999998e-230 96532000.0 5027.900000000001 7747.2 6373.1 6074.6 6610.6 6479.8 7020.1 7396.799999999999 5976.0 6840.900000000001 7323.8 True False 5538.328706655649 8400.083732800762 6805.616890563584 6449.814245582431 6146.2942613319465 6427.030657170847 7287.25374704612 7249.265021322652 5724.849502099799 6408.964406524701 6423.019029393343 0.8622625406075974 1.307809255174222 1.059566670971918 1.0041717479064698 0.956916713652095 1.0006245704331789 1.134552725703882 1.1286382600064238 0.8913019681089928 0.9978118353994712 1.0 12.649035855366472 -8.764655906088713 24.998292405732343 0.9486703750250597 1.0609089706596861 0.11903147374013745 0.11137206473247689 106.3682466593289 826672.1943538991 0.018850209859082916 0.02047459595572467 1.719270034788875e-09 8.764655906088713 0.11223859563462646 AAVQELSSS(ph)ILAGEDPEER ddPTM_A549_MK2206_60min_R1 3 AAVQELSSSILAGEDPEER 19 0 P49768;P49768-2;P49768-7;E7ES96 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin 1 AAVQELS(0.002)S(0.116)S(0.881)ILAGEDPEER;AAVQELS(0.047)S(0.383)S(0.57)ILAGEDPEER;AAVQELSS(0.297)S(0.703)ILAGEDPEER 251.35 4.5976e-97 89137200.0 3684.24 3449.1800000000003 3468.21 3522.02 4523.7 3713.6499999999996 3479.63 3837.1 5632.200000000001 4976.5 6113.700000000001 True False 4306.049640980075 3624.728529361066 3960.054329082925 4384.915058109484 3858.269722509154 4106.625978078636 4111.833729939733 4381.020675625916 4356.515692775248 3852.3051936706465 4595.499560463854 0.9370144821742594 0.7887561475460566 0.8617244495358434 0.9541759280827534 0.8395756917708666 0.8936190557842479 0.8947522844555985 0.9533284941025455 0.9479961069424008 0.8382777852516665 1.0 12.166005984964059 -8.58187943605803 0.43108507346756747 0.9973249273730171 0.8614372401797622 0.0 0.06351645553965543 0.4890713152880987 0.2276671477177613 0.01897914769641309 0.020734608691463853 2.618909939589874e-09 8.58187943605803 -0.13588768719325495 AAVQELSSS(ph)ILAGEDPEER ddPTM_A549_PD325901_60min_R1 1 AAVQELSSSILAGEDPEER 19 0 P49768;P49768-2;P49768-7;E7ES96 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin 1 AAVQELSS(0.022)S(0.978)ILAGEDPEER 357.28 1.0312999999999993e-255 63971000.0 2400.2 2741.5 2533.8 2397.9 3403.2 2985.6 2716.9 2915.6 3282.8 2933.0 3319.6 True False 2643.866537066147 2972.5358262950854 2705.7589049771723 2546.012836973976 3164.17097240264 2961.286263472524 2820.293116244727 2857.446070756046 3144.8353322445123 2747.8098794510884 2911.3102446781922 0.9081363080073908 1.0210302497745858 0.9293955908420399 0.8745247407513604 1.0868546140648085 1.0171661604549658 0.9687367127567932 0.9814983050945503 1.080213054583653 0.9438395940364038 1.0 11.50745287355909 -6.7645603871299 24.99999368706555 1.0302692972276872 0.9392633246096641 0.28279150839510925 0.054240511074336396 61.852141222867736 495456.0689571755 0.007486122265653982 0.01458780651673158 1.7196482135395684e-07 6.7645603871299 -0.09100597261802312 AAVS(ph)ASR ddPTM_A549_MK2206_60min_R1 2 AAVSASR 7 0 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 1 AAVS(0.937)AS(0.063)R;AAVS(0.997)AS(0.003)R 66.50399999999999 0.024222999999999998 9061900.0 2957.2 2929.3999999999996 1717.78 1381.8400000000001 2380.3999999999996 1827.25 1752.58 1936.17 2651.2 4102.0 3919.9 True False 3456.30306340148 3078.4939475209485 1961.387034064277 1720.3908620331558 2030.246313296813 2020.6083821696163 2071.001100237029 2210.6280267719426 2050.7074330964324 3175.355351037273 2946.4806462636802 1.1730275804744505 1.0448037225103342 0.6656711071737182 0.5838799125372562 0.689041116177461 0.6857701185758246 0.7028727994067046 0.7502604945242575 0.6959853734986708 1.077677314820927 1.0 11.524777074648956 -5.607004861525736 5.085782976557351 0.7866075897212684 1.1442502614979537 0.4698967098289373 0.14268186971118504 0.13953389303207234 6.018991051731311 0.021666055391581576 0.09052036103786913 2.4716964765013596e-06 5.607004861525736 0.3576426717766853 AAVS(ph)PQK ddPTM_A549_MK2206_60min_R1 2 AAVSPQK 7 0 E9PJF5;G5E9I4;Q9HCU9 E9PJF5 BRMS1 Breast cancer metastasis-suppressor 1 1 AAVS(1)PQK;AAVS(1)PQK 80.23899999999999 0.015958 27441000.0 9633.7 8754.3 7708.799999999999 6705.9 8353.2 6955.6 6230.1 7113.9 9414.2 14049.6 13773.5 True False 11259.63303864833 9199.856477361456 8802.023756356866 8348.845801039293 7124.455345417134 7691.636975246395 7362.028526279377 8122.317110405046 7281.898731388217 10875.785602129023 10353.15982073849 1.087555223101461 0.8886037341887794 0.8501775215258889 0.8064055752636657 0.6881430856641549 0.7429265179350579 0.7110900105620357 0.7845254251880834 0.7033503642821964 1.0504798332528062 1.0 13.337783530074008 -5.1706384734880215 1.69634363990791 0.8183779674774847 1.2256442873762874 0.3365613893643393 0.11123296836484822 1.2444413329144075 2.881945767334111 0.01773419649569316 0.8794174641858816 6.750897693350146e-06 5.1706384734880215 0.4072663198988027 AAVS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 AAVSPQK 7 0 E9PJF5;G5E9I4;Q9HCU9 E9PJF5 BRMS1 Breast cancer metastasis-suppressor 1 1 AAVS(1)PQK 81.594 0.015344 26689000.0 8345.3 8318.2 7451.5 7816.5 7446.1 6684.3 5995.8 6841.6 7458.3 9074.3 11098.0 True False 9192.508712514846 9019.20390672544 7957.2035995095885 8299.307452440504 6923.111623650471 6629.865276972606 6223.973450027652 6705.138920868628 7144.853587936898 8501.347149370273 9733.016356018368 0.9444665842804937 0.9266607161456639 0.8175475421439404 0.8526963429285376 0.7113017558395035 0.6811727253363812 0.6394701521465219 0.6889065707490089 0.7340842064360561 0.8734545220519949 1.0 13.248671264127406 -2.6798380341057895 23.635238962140864 0.8282049807386371 0.7975842468858686 0.0 0.11857226433668011 0.0 0.0 0.01939888880503004 0.0 0.002090075458795237 2.6798380341057895 -0.030620733852768534 AAVS(ph)PQKR ddPTM_A549_MK2206_60min_R1 3 AAVSPQKR 8 1 E9PJF5;G5E9I4;Q9HCU9 E9PJF5 BRMS1 Breast cancer metastasis-suppressor 1 1 AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR 85.355 0.0012519999999999999 292517900.0 21071.199999999997 22613.0 20832.0 17144.6 21328.3 15092.0 15654.0 16251.199999999999 21283.1 28505.9 30436.1 True False 24627.503418620756 23763.905112067743 23786.290848436347 21345.02776965033 18190.935323428155 16689.025422741186 18498.129171341934 18554.857367212702 16462.511832126846 22066.397391792638 22877.97637637338 1.0764721063377858 1.0387240864803622 1.0397025705910339 0.9329945716568637 0.7951286872651184 0.7294799657183112 0.808556179402536 0.8110357779010008 0.7195790205084776 0.9645257530111414 1.0 14.481671826731974 -6.429198783803698 2.88124204115844 0.8412560032421588 1.0522414941852343 0.5783967654865028 0.08167222081485465 0.20648988960982223 3.3027083597507754 0.015869843468797207 0.040282851254268275 3.722212953832219e-07 6.429198783803698 0.2109854909430755 AAVS(ph)PQKR ddPTM_A549_PD325901_60min_R1 4 AAVSPQKR 8 1 E9PJF5;G5E9I4;Q9HCU9 E9PJF5 BRMS1 Breast cancer metastasis-suppressor 1 1 AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR 84.213 0.0021449000000000004 459164500.0 20628.100000000002 19982.500000000004 19513.0 19468.3 24152.200000000004 21992.699999999997 20481.0 21549.4 22294.4 22959.2 25070.4 True False 22722.249526395382 21666.49540358984 20837.269521201168 20670.812675282723 22455.832792566704 21813.598742856455 21260.415662633222 21119.58031182275 21357.443898864414 21509.552193758405 21986.89973435961 1.033444905872137 0.9854274893395242 0.9477129460247695 0.9401422176397067 1.0213278390256302 0.9921179887297921 0.9669583215231073 0.9605529004536518 0.9713713236927385 0.9782894566142384 1.0 14.424356570682326 -10.854388219996187 1.159372091858786 0.9997322953130412 0.97811782866096 0.0 0.02771145753191591 1.0602494956194923 2.5791767875046254 0.017805787971725443 0.0045678742425314745 1.3983367770830591e-11 10.854388219996187 -0.02161446665208122 AAVT(ph)PGKK ddPTM_A549_MK2206_60min_R1 4 AAVTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK 76.465 0.006390600000000001 1635870000.0 52304.3 39078.9 28955.1 22747.4 31545.5 29082.199999999997 26911.0 28196.899999999998 34246.3 64516.9 67917.5 True False 61131.98712263969 41067.84909052242 33061.36857457562 28320.514021169576 26905.19873807116 32159.659100798013 31800.380358373786 32193.896924384626 26489.567730103507 49942.48748106693 51051.71032235865 1.1974522839025488 0.8044363025490314 0.6476055036317958 0.5547417283837071 0.5270185576189743 0.6299428343875355 0.6229052887273487 0.6306134842711618 0.518877184776748 0.9782725625784583 1.0 15.639671674291161 -10.944671089737751 1.2082106422913603 0.9997790089811899 0.6574094836812461 0.2908274514325908 0.18179299262195353 0.46486463229698105 1.2073680519109569 0.13120540516648171 0.03075834232566205 1.135870734738415e-11 10.944671089737751 -0.3423695252999438 AAVT(ph)PGKK ddPTM_A549_PD325901_60min_R1 4 AAVTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK 98.249 0.0060539999999999995 2421189000.0 56687.5 49244.5 41425.0 38797.5 44006.399999999994 35094.1 31854.0 34146.2 41047.299999999996 50097.299999999996 63356.8 True False 62442.37326886814 53394.50683858776 44236.349608761295 41193.93345948448 40915.542277838336 34808.305285011775 33066.221401177645 33465.12725382429 39322.224726830835 46934.14792834127 55564.31525184577 1.1237855264812948 0.9609496058140313 0.7961287637264967 0.741373906486071 0.7363636552054725 0.6264507198053788 0.5950981533976383 0.602277326772467 0.7076884606352565 0.8446814779523838 1.0 15.761871026217296 -5.5107355651591154 2.3068855945262365 0.7883237183938048 1.1340158142718566 0.4721652699734863 0.11989583590652528 0.37890191251972477 3.2982227974476426 0.023181537434394547 0.2112441035234252 3.0850658248518746e-06 5.5107355651591154 0.34569209587805183 AAVTPGKK ddPTM_A549_MK2206_60min_R1 2 AAVTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 76.899 0.004614 5856600.0 5589.0 5525.0 4756.1 3661.6 6250.6 5384.2 4944.5 5239.7 7055.5 9250.5 8967.900000000001 False True 6532.28656206915 5806.198900816978 5430.586496939719 4558.692164375472 5331.14502011975 5953.952470257295 5842.851647355321 5982.443520908264 5457.440515318307 7160.805625248731 6740.922928551253 0.9690492876578634 0.8613358975259543 0.8056146842946995 0.6762712187476705 0.7908627760064764 0.8832547906814457 0.8667732459316303 0.8874813707733639 0.8095984145143179 1.0622886066415418 1.0 12.718730415132848 -10.93045297781019 0.6585713531512605 1.0305043119823876 0.8318611957541193 0.5007494253874809 0.0724575043002803 0.9346163887193288 0.5333829886028216 0.11196632338869505 0.014756582828312565 1.1736727522046419e-11 10.93045297781019 -0.19864311622826825 AAVTPGKK ddPTM_A549_PD325901_60min_R1 2 AAVTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 73.931 0.005172100000000001 8495000.0 10853.099999999999 9598.4 6699.1 7464.9 9260.9 9041.8 6186.200000000001 7950.4 8677.2 10882.9 11675.9 False True 11954.898722370053 10407.290853587732 7153.741210960833 7925.989918982041 8610.446332370588 8968.16657859923 6421.6192262185305 7791.82303503186 8312.527459775833 10195.751836712669 10239.838319628301 1.1674890119558068 1.0163530447193145 0.6986185706905291 0.7740346743355366 0.84087717633838 0.8758113457131975 0.6271211542382664 0.7609322326990313 0.8117830770669405 0.9956946114245647 1.0 13.321905315852995 -5.541412903673891 6.40441136704364 0.8535412596778997 1.133177665352628 0.47134940640172873 0.1109965965358447 0.10584446344019383 16.879464346431263 0.01746879171125747 0.07404498345592903 2.8746640402039225e-06 5.541412903673891 0.27963640567472825 AAVVESHK ddPTM_A549_PD325901_60min_R1 1 AAVVESHK 8 0 P00390-2;P00390-3;P00390;P00390-5;P00390-4;A0A2R8YF59;H0YC68 P00390-2 GSR Glutathione reductase, mitochondrial 0 89.75200000000001 0.0028511 4964800.0 1948.6 1746.4 1616.0 1768.1 2051.1 2349.2 1692.4 1613.2 1893.7 2110.6 2198.7 False True 2146.420437516497 1893.5752569913323 1725.6714777974232 1877.3115213535536 1907.0378119108639 2330.068894074776 1756.8052081168155 1581.0234604690827 1814.1143745191412 1977.3363558027506 1928.273838707659 1.1131305079339981 0.9820053661363876 0.8949307111659923 0.9735710165583843 0.9889870274799623 1.208370329618952 0.9110766182951676 0.8199164603761333 0.940797068395105 1.0254437497985107 1.0 10.913094231298482 AAVVT(ph)SPPPTTAPHK ddPTM_A549_MK2206_60min_R1 3 AAVVTSPPPTTAPHK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.888)S(0.112)PPPTTAPHK;AAVVT(0.522)S(0.478)PPPTTAPHK;AAVVT(0.5)S(0.5)PPPTTAPHK 99.711 7.9732e-06 275367000.0 13373.000000000002 15682.8 13112.199999999999 12541.0 18147.4 13997.0 13837.8 13389.5 20227.3 20042.8 21330.2 True False 15630.035461540661 16480.987533345244 14971.707126673726 15613.545562986876 15477.941499715407 15478.15324954336 16351.94914061554 15287.502628624008 15645.848846360706 15515.117559670853 16033.322656428354 0.974846935751898 1.0279209048872602 0.9337869291036198 0.9738184590657399 0.9653608195497597 0.9653740264085308 1.0198727669251662 0.9534831273725213 0.9758332182061904 0.9676794942719041 1.0 13.96878581210492 AAVVT(ph)SPPPTTAPHKER ddPTM_A549_MK2206_60min_R1 2 AAVVTSPPPTTAPHKER 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.524)S(0.476)PPPTTAPHKER;AAVVT(0.5)S(0.5)PPPTTAPHKER 64.679 0.0014768 93087000.0 2102.01 2403.5 2469.2 1945.1 3119.7 2033.53 2084.83 2056.5 3790.2 3239.8999999999996 3501.8999999999996 True False 2456.7778987895813 2525.8278838214655 2819.3696890821357 2421.6495873188583 2660.7962626415992 2248.716794852034 2463.616624523368 2348.015172767114 2931.72575170568 2508.0043397917243 2632.2815824767936 0.9333264021389096 0.9595583924744242 1.0710745035222657 0.9199812069650446 1.0108326861209034 0.8542842869933954 0.9359244242423626 0.8920075984263793 1.1137584106587604 0.952787253646271 1.0 11.362098111088551 -8.760564446183496 24.999995557052635 1.0537192487280878 0.9494208011282619 0.15900712532117434 0.06674692388034863 19.43178029570693 555237.0951555348 0.01130464492636285 0.012461423031169585 1.7355437015352308e-09 8.760564446183496 -0.10429844759982587 AAVVT(ph)SPPPTTAPHKER ddPTM_A549_PD325901_60min_R1 1 AAVVTSPPPTTAPHKER 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.5)S(0.5)PPPTTAPHKER 77.023 0.00023186 61300000.0 1512.9 1950.6 1629.3 1492.5 1969.0 2244.9 2002.4 2569.0 2561.9 2471.6 2494.9 True False 1666.4884942618858 2114.983907631295 1739.8740957768184 1584.6883352865666 1830.7042326812389 2226.6182786942218 2078.6024277553247 2517.7592796584877 2454.2322522472336 2315.542754194105 2188.04311647416 0.7616342117367807 0.9666097947098075 0.7951735880691754 0.7242491353827402 0.8366856296832298 1.017629982667902 0.9499823893346355 1.1506899753034285 1.121656257031175 1.058271081022114 1.0 11.095425452093547 -7.393074321530857 2.013854375544951 1.061058523013562 0.8159550817238397 0.7047562519360402 0.07537222016670585 0.15267952770961205 1.213977889035648 0.012830333197603523 0.022348322969618833 4.045066618818096e-08 7.393074321530857 -0.2451034412897224 AAVVTS(ph)PPPTTAPHK ddPTM_A549_MK2206_60min_R1 2 AAVVTSPPPTTAPHK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.04)S(0.953)PPPT(0.005)T(0.001)APHK;AAVVT(0.27)S(0.73)PPPTTAPHK 102.73 1.4210999999999998e-09 104950000.0 5422.8 6791.2 5690.8 5421.6 6661.6 5204.3 5813.1 5947.4 8346.3 8350.8 7616.8 True False 6338.036065269021 7136.8430724395 6497.841011918284 6749.892243384874 5681.687464568161 5755.015571665254 6869.2650240148105 6790.462163148615 6455.8763763023435 6464.348480117515 5725.338347014261 1.1070151109190391 1.246536473457736 1.134926989128403 1.1789508033014178 0.9923758422995449 1.0051834883551416 1.1998007117949812 1.18603683338467 1.127597354952665 1.1290771109603757 1.0 12.483145238506756 -10.504732160290258 0.7818235767619974 0.9979244004366861 1.1314433337553187 0.0005499742595752588 0.08233123415261107 0.7031007826034706 0.759109833760643 0.055228491102196214 0.015033322846649252 3.128007889051012e-11 10.504732160290258 0.13351893331863263 AAVVTS(ph)PPPTTAPHK ddPTM_A549_PD325901_60min_R1 4 AAVVTSPPPTTAPHK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.206)S(0.794)PPPTTAPHK;AAVVT(0.026)S(0.974)PPPTTAPHK;AAVVT(0.033)S(0.967)PPPTTAPHK;AAVVT(0.12)S(0.877)PPPT(0.002)TAPHK 150.69 5.491099999999999e-41 405894500.0 12323.8 12960.8 12945.699999999999 13434.5 16521.4 13079.6 14257.900000000001 15609.8 16069.8 16568.7 18856.399999999998 True False 13574.90310369794 14053.052101931551 13824.273050818121 14264.318553036766 15360.993859735827 12973.084074127553 14800.492186722253 15298.450293348795 15394.442190234831 15522.549454367967 16537.182340568103 0.8208715864731525 0.8497851576237011 0.8359509356624301 0.8625603962801044 0.928876125532769 0.7844797140745494 0.8949827051501091 0.9250941289931527 0.9308987391685243 0.9386453589671625 1.0 14.01342582387873 -8.904536222220512 0.32977513802443476 1.011712280562171 0.8276661864158159 0.579161347820398 0.03915970914357251 0.47177458300889114 0.15071235898945787 0.030328388368445685 0.024408062534480232 1.245844323609257e-09 8.904536222220512 -0.1840460941463551 AAYEAELGDAR ddPTM_A549_MK2206_60min_R1 1 AAYEAELGDAR 11 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 63.426 0.018668 6510300.0 3583.0 3820.7 3513.2 3306.5 4175.2 3718.9 3599.4 3281.5 4905.2 5442.1 5148.2 False True 4187.722804060431 4015.157310470842 4011.424587592482 4116.592648434426 3561.0336108539946 4112.431529593969 4253.364388611742 3746.6626741722725 3794.1800319948024 4212.7258302974 3869.7598569082575 1.0821660668644721 1.0375727329185613 1.036608145187957 1.0637850411015881 0.920220825717873 1.0627097498705238 1.0991287691970542 0.96818996855419 0.9804691175400637 1.0886271980874687 1.0 11.918028325451115 -8.296819615787332 24.978953624986737 0.9888253499391443 1.039518122287619 0.03519461097415899 0.05336328415193267 654.5725451537729 462135.93713198666 0.007127933851976438 0.008617378017010489 5.048709521700244e-09 8.296819615787332 0.0506927723484748 AAYFGIYDTAK ddPTM_A549_MK2206_60min_R1 2 AAYFGIYDTAK 11 0 P05141 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed 0 ; 211.52 1.8099999999999997e-30 5071900.0 5213.8 6054.200000000001 5773.799999999999 5032.4 7353.299999999999 6353.9 5335.4 5390.9 8631.7 8313.6 7604.2 False True 6093.761974828433 6362.332920421021 6592.611659979924 6265.338225913024 6271.639310857606 7026.265480622535 6304.773117463766 6155.076583938844 6676.6337319924905 6435.55198595404 5715.867274756566 1.066113274137906 1.1131001849044837 1.153387813796061 1.0961308100317741 1.0972331947866494 1.2292562340719813 1.10303000654127 1.0768403617631208 1.1680876078909377 1.1259099759674047 1.0 12.480756701397839 -10.906686698797179 1.072332561530033 0.9975161240305347 1.1265062256409022 0.0 0.05736059737496338 0.34240423900099587 0.6766004758206244 0.034227751448757955 0.007517813995670287 1.2396905801328356e-11 10.906686698797179 0.1289901016103675 AAYFGIYDTAK ddPTM_A549_PD325901_60min_R1 2 AAYFGIYDTAK 11 0 P05141 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed 0 ; 196.88 2.0055999999999998e-23 10712000.0 13354.8 12538.900000000001 13493.8 14121.2 17167.7 15494.2 14596.400000000001 14155.1 17690.2 15535.0 15036.9 False True 14710.56946471586 13595.59710827338 14409.570412811168 14993.434452427906 15961.899977349787 15368.020372285642 15151.873989456559 13872.76542603886 16946.742413327618 14554.117448780324 13187.456626762712 1.1154970879572133 1.0309491430426685 1.092672440231446 1.1369466362452432 1.210385021851492 1.1653513491826528 1.1489610482363404 1.0519667149376914 1.2850652626174925 1.1036333889617578 1.0 13.686878728386732 -6.16456931469243 3.9063928490770787 1.1401695579676738 1.0713791515627935 0.11232433353703952 0.07328351712177952 0.5247984318438278 14.478367689198468 0.014508086366406044 0.04103738569816577 6.845902117351786e-07 6.16456931469243 -0.06879040640488032 AAYFGVYDTAK ddPTM_A549_PD325901_60min_R1 2 AAYFGVYDTAK 11 0 P12236;P12235;V9GYG0 P12236 SLC25A6;SLC25A4 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 0 ; 192.92 4.9791e-19 5629800.0 9852.0 9864.1 10027.4 11222.2 13558.8 12026.3 10257.8 11926.599999999999 11834.5 13085.2 12217.8 False True 10852.167787340932 10695.382325061955 10707.91966365462 11915.369806534605 12606.476663320662 11928.361800107055 10648.166192283546 11688.714606763304 11337.137120582343 12258.998238865803 10715.088055015423 1.0127931503335939 0.9981609362562126 0.9993310002377958 1.1120179083322945 1.1765163849885427 1.1132304036011849 0.9937544271789206 1.0908650070581691 1.058053565437174 1.144087493814642 1.0 13.387356085467978 AAYLQETGKPLDETLK ddPTM_A549_MK2206_60min_R1 1 AAYLQETGKPLDETLK 16 1 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 64.52 0.0030935 1567300.0 2543.4 3010.0 2795.9 2496.5 3377.4 2771.8 2712.3 2706.3 3876.4 3579.5 3401.8 False True 2972.6637398401613 3163.1961432505163 3192.400661633217 3108.1426120721444 2880.5889340147273 3065.110036228071 3205.089801420133 3089.926312696152 2998.4015893387973 2770.8884639292833 2557.03917509625 1.1625413363986756 1.2370542360311902 1.2484754604954582 1.2155240491984838 1.126532969095516 1.1986949852313844 1.253437895138814 1.2084000678557627 1.172606825324033 1.083631604441486 1.0 11.320258548207681 -10.318292917154208 0.573448730649066 0.9854762398309247 1.2104058232372097 0.6650650626634802 0.042804564678974595 0.3120099960672044 0.1764380339427068 0.03473430214572928 0.008849076132557181 4.805151476778446e-11 10.318292917154208 0.224929583406285 AAYLQETGKPLDETLK ddPTM_A549_PD325901_60min_R1 1 AAYLQETGKPLDETLK 16 1 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 132.47 3.7163999999999997e-10 2831100.0 3169.4 3121.9 4054.0 3529.1 3644.2 4009.9 3770.8 4312.7 4318.1 3660.4 3950.1 False True 3491.1551548110374 3384.993469309002 4329.128818682392 3747.0844918323783 3388.2439638075048 3977.244703878107 3914.2998574609346 4226.679815252299 4136.625273597244 3429.281719312228 3464.2627417469976 1.0077628098873581 0.9771179964259811 1.2496537189610653 1.0816398094397297 0.9780562897197695 1.1480782493629271 1.1299084824862295 1.2200806146478431 1.1940853168403676 0.9899023183163269 1.0 11.758332637890868 AAYLQETGKPLDETLKK ddPTM_A549_MK2206_60min_R1 2 AAYLQETGKPLDETLKK 17 2 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 ; 123.19 1.7508000000000003e-10 33167000.0 7931.3 9026.9 9065.5 8241.8 12426.5 8573.099999999999 8801.0 9135.0 11987.2 11613.4 12793.5 False True 9269.909538332271 9486.33065299272 10351.124216901877 10261.041369988458 10598.578311285004 9480.299751636796 10400.02777801076 10429.914224764198 9272.118339624913 8989.924874143411 9616.520867362527 0.9639566810272705 0.986461817515349 1.0763897213630054 1.0670222122444892 1.1021219064012513 0.9858346778835523 1.0814750907791792 1.0845829139894285 0.9641863692194044 0.9348417164729795 1.0 13.231299324680585 -8.77374111409729 24.93768102533466 0.983088005374096 1.0447613518170766 0.33484918065176317 0.046798768044007406 210.04436448290235 425793.8009779742 0.007956115619100956 0.00849960627027985 1.6836774135776533e-09 8.77374111409729 0.061673346442980614 AAYLQETGKPLDETLKK ddPTM_A549_PD325901_60min_R1 1 AAYLQETGKPLDETLKK 17 2 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 126.84 1.4217000000000002e-11 39504000.0 4463.2 3666.9 4258.7 4532.8 5229.1 5241.3 4938.9 5453.4 5370.4 4753.1 4944.9 False True 4916.3007783658195 3975.9225319866678 4547.72099164349 4812.780761264287 4861.82605541568 5198.6165905474745 5126.852542169778 5344.62765889046 5144.700764069069 4452.988454830882 4336.7086483037665 1.1336479291244874 0.9168064664758574 1.048657256101873 1.1097772877010608 1.1210866234505525 1.1987470250234193 1.1821989803661501 1.2324156618132336 1.1863145950746161 1.02681291642052 1.0 12.08238480700387 -6.191754157503081 3.8389641319237224 1.1184087340289057 1.017200160149964 0.21098438959422117 0.08229884316754643 0.33264542245981393 9.600546090629935 0.013658047740109822 0.03826723708907177 6.430516286443891e-07 6.191754157503081 -0.10120857387894167 ACKVDSPT(ph)VTTTLK ddPTM_A549_PD325901_60min_R1 1 ACKVDSPTVTTTLK 14 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3 Q07866-6 KLC1 Kinesin light chain 1 1 ACKVDS(0.356)PT(0.607)VT(0.015)T(0.019)T(0.003)LK 55.589 0.0035251999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ACPEEPAAPS(ph)PEPR ddPTM_A549_MK2206_60min_R1 2 ACPEEPAAPSPEPR 14 0 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 1 ACPEEPAAPS(1)PEPR;ACPEEPAAPS(1)PEPR 184.51 4.6743000000000003e-26 33085000.0 5495.9 6321.5 5950.2 5510.3 9377.5 7097.9 6226.5 6948.0 10494.4 8713.9 9584.2 True False 6423.47355814561 6643.237348690405 6794.027832486846 6860.323747366769 7998.0821722991295 7848.9950667953035 7357.774452878533 7932.900277357596 8117.435156113162 6745.423937933615 7204.178629536561 0.8916316333148484 0.9221366779348945 0.9430676530745463 0.952270078262633 1.1102004244463939 1.0895058924018133 1.0213203796352637 1.1011526345048321 1.126767612734132 0.9363210276710674 1.0 12.814618238359296 -6.643857362896157 5.157574436994993 1.0664073486774657 0.9237339021352728 0.5610351783759793 0.054151701406901544 0.10486936515276467 4.324476776308262 0.007373836393809944 0.015573975386101767 2.2706104752706017e-07 6.643857362896157 -0.14267344654219283 ACPEEPAAPS(ph)PEPR ddPTM_A549_PD325901_60min_R1 2 ACPEEPAAPSPEPR 14 0 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 1 ACPEEPAAPS(1)PEPR;ACPEEPAAPS(1)PEPR 193.45 4.1838e-27 38996000.0 7199.6 6638.6 6929.200000000001 6394.9 7209.200000000001 7409.0 7135.799999999999 7301.3 8398.1 6865.200000000001 7411.6 True False 7930.498091934611 7198.05812016873 7399.457180664544 6789.898449128349 6702.850662389837 7348.663560446124 7407.356773859587 7155.66984374096 8045.157062179432 6431.7301003776365 6500.0201860033985 1.2200728405446315 1.1073901179058534 1.1383744925281798 1.0445965173691538 1.0312045917677606 1.130560113685512 1.1395898107839681 1.1008688648612788 1.2377126273397123 0.9894938656078619 1.0 12.666228483141914 -11.137382058998849 1.5214551081195262 1.0003461742027175 1.1381129229776954 0.4120200552238421 0.0599695940630757 0.3617867487762648 1.5064121502959555 0.04951338777587866 0.010739408931743138 7.288160716316672e-12 11.137382058998849 0.13776674877497785 ACPGPPPPS(ph)PEPLAR ddPTM_A549_MK2206_60min_R1 2 ACPGPPPPSPEPLAR 15 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 ACPGPPPPS(1)PEPLAR;ACPGPPPPS(1)PEPLAR 192.18 5.881e-34 15963800.0 4835.700000000001 5297.1 4441.799999999999 4815.4 5104.9 4491.1 4151.5 4556.700000000001 6502.2 5975.7 7788.5 True False 5651.847938485918 5566.699764256578 5071.714030846034 5995.173216171522 4353.975972420136 4966.3452210491 4905.773812113587 5202.626179308487 5029.462081879762 4625.785219696105 5854.400498335334 0.9654016564280133 0.9508573535137267 0.8663080075044656 1.0240456248041478 0.7437099620461847 0.8483097838047212 0.8379634795242512 0.8886693318620453 0.8590908810064943 0.7901381569319388 1.0 12.515305728256092 -10.793646116711228 1.0039417682796246 1.0010225971707536 0.8843840185428207 0.0 0.09367924706519193 0.6009193624457323 1.05979767510844 0.050402418296018436 0.012188818065109868 1.6082511969134677e-11 10.793646116711228 -0.11663857862793292 ACPGPPPPS(ph)PEPLAR ddPTM_A549_PD325901_60min_R1 2 ACPGPPPPSPEPLAR 15 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 ACPGPPPPS(1)PEPLAR;ACPGPPPPS(1)PEPLAR 177.21 1.1845999999999998e-27 31818000.0 9914.7 11654.9 11513.599999999999 9696.0 9898.0 10773.3 10304.8 10734.8 8743.2 10587.599999999999 11254.1 True False 10921.233045183635 12637.099325875108 12294.982132901232 10294.899898786301 9202.798626246275 10685.565816676235 10696.954803002931 10520.685992712311 8375.753709297016 9919.097129108874 9869.917045617805 1.106517207257847 1.2803653027140607 1.2457026818032015 1.04305840172762 0.9324089132372467 1.0826398810940943 1.0837937901162327 1.0659345913533735 0.8486143977284804 1.0049828264273917 1.0 13.268822243874789 -6.6691712098695115 0.5705638424128615 0.939806369992002 1.2498716824447567 0.4034469789940469 0.09141640509441556 0.767459688538617 0.38112544316244185 0.02084975966132871 0.11818124120619397 2.1420459859395719e-07 6.6691712098695115 0.3100653124527547 ACQLDSRYWRIT(ph)NAK ddPTM_A549_MK2206_60min_R1 1 ACQLDSRYWRITNAK 15 2 Q49AF1;G3V1E0;E9PJM3;Q9UK99-3;Q9UK99-2;Q9UK99 Q49AF1 FBXO3 F-box only protein 3 1 ACQLDS(0.001)RY(0.001)WRIT(0.998)NAK 41.202 0.032852 1587200.0 630.39 621.28 737.95 807.38 770.99 526.06 632.41 586.98 871.56 1086.4 1015.0 True False 736.7844204442245 652.900498298565 842.6024064709878 1005.1881362446658 657.5783923242772 581.7273200296337 747.3107109523676 670.1862125508585 674.1530515953258 840.981485462431 762.9474874250961 0.9657079059671977 0.8557607293551311 1.1044041960407032 1.3175063196513273 0.8618920740450517 0.7624736035148761 0.9795047801710419 0.8784172221507648 0.8836165826701304 1.102279644829417 1.0 9.575439951633284 ACRPPGS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 ACRPPGSPGR 10 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 1 ACRPPGS(1)PGR;ACRPPGS(1)PGR 72.29 0.00061576 26686000.0 2140.67 2221.64 2083.2 1927.62 2723.5 1796.85 2317.3 2170.76 2699.8 2848.1 2982.2 True False 2501.9627616433286 2334.711986608329 2378.629084843636 2399.8869865341508 2322.8767577986355 1986.9914743475017 2738.3234143829477 2478.471877673689 2088.2996106946853 2204.7122319086443 2241.6374354671157 1.116131771381649 1.0415207872908396 1.0611123133514113 1.070595515832853 1.0362410624689586 0.8864018074062229 1.2215728427163477 1.105652429986842 0.9315956174061317 0.9835275754347059 1.0 11.1303372388303 -8.763251935629157 24.99983863690755 0.9676979290038614 1.0645043318025162 0.2348444937778037 0.07670643179724997 50.15020021709826 691697.8049682988 0.013266067868331621 0.014480957243146823 1.7248370181979275e-09 8.763251935629157 0.09680640279865482 ACRPPGS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 ACRPPGSPGR 10 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 1 ACRPPGS(1)PGR;ACRPPGS(1)PGR 70.438 0.00086859 24201000.0 4708.0 5177.1 5647.700000000001 4083.4 3713.7 4336.799999999999 3895.5 4597.2 3395.5 5124.0 6653.9 True False 5185.952694153584 5613.392386034033 6030.986884379021 4335.6223439257365 3452.8625235694876 4301.482538661458 4043.7453841993943 4505.505239566368 3252.7989431693204 4800.469765532689 5835.512482547365 0.8886884758902563 0.9619364884956307 1.0334973838915218 0.7429719937867592 0.5916982499645371 0.7371216412485062 0.6929546284569313 0.7720839006070618 0.5574144435296251 0.822630365351759 1.0 12.510643645575525 -6.271891712990421 23.996180826307313 0.7578180236178699 0.9614303520316025 0.417252946175502 0.11526844237005936 450.6082667633149 1034495.7594198212 0.023591845825634967 0.055421047475528805 5.346976643216601e-07 6.271891712990421 0.20361232841373267 ACS(ph)VEELYAIPPDADVAK ddPTM_A549_PD325901_60min_R1 1 ACSVEELYAIPPDADVAK 18 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ACS(1)VEELYAIPPDADVAK 147.64 6.4183e-17 2325700.0 1855.0 1878.3 1903.8 1937.3 1804.9 2009.2 2063.0 2096.8 1834.6 1842.7 2081.3 True False 2043.3182344211762 2036.5909328944226 2033.0033164794136 2056.9626210724737 1678.1300505669724 1992.837741348137 2141.5085939169157 2054.9776790922215 1757.4981419933542 1726.3516075228517 1825.3132944477425 1.1194342585662218 1.1157486986422258 1.1137832188388836 1.1269093515778166 0.9193654895691202 1.0917784620371593 1.1732279606087237 1.12582189881763 0.9628473902750453 0.9457837253331176 1.0 10.833928392246262 -8.764361348338586 24.99887851769114 0.9824557067006612 1.0966340431240174 0.45718185343457507 0.062011229681683704 55.23716738420141 472580.2544421728 0.010913146120590503 0.01186815698708105 1.7204365153981156e-09 8.764361348338586 0.11417833642335617 ACTGLSGPGSGSKS(ph)PPATR ddPTM_A549_PD325901_60min_R1 1 ACTGLSGPGSGSKSPPATR 19 1 I3L2J0;I3L2I4 I3L2J0 CIC 1 ACTGLS(0.001)GPGS(0.034)GS(0.238)KS(0.371)PPAT(0.356)R 51.827 0.0039051000000000003 4532300.0 2193.1 1957.3 2213.7 1673.6 1826.9 1919.2 1990.9 2151.5 1831.8 2337.0 1924.7 True False 2415.7418975251107 2122.248540144948 2363.9349940595007 1776.9744709786241 1698.584846462852 1903.5706715087329 2066.6647889622823 2108.586644680902 1754.815816256092 2189.4414211650846 1687.9741016785501 1.4311486740956842 1.2572755340467296 1.4004569096817088 1.052726146219643 1.0062860826915239 1.1277250460275368 1.2243462662769267 1.2491818699019657 1.0395987796916275 1.2970823539222947 1.0 10.721077053833636 -2.0000000000000013 0.219975356992213 1.001014724646825 3.1659439257582753 0.17247002549206425 0.133896160848125 25.805297168559488 0.29958026435082125 0.06828155903806961 20.116200513403367 0.009999999999999969 2.0000000000000013 2.16492920111145 ADAASSLT(ph)VDVTPPTAK ddPTM_A549_PD325901_60min_R1 1 ADAASSLTVDVTPPTAK 17 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ADAASS(0.003)LT(0.829)VDVT(0.167)PPTAK 268.12 5.955799999999998e-100 55733000.0 11694.0 11611.0 12514.0 11142.0 12486.0 11906.0 13085.0 13638.0 12750.0 11575.0 14324.0 True False 12881.166271332206 12589.499718808036 13363.27529279513 11830.216034682031 11609.026434361585 11809.041483421724 13582.956835386743 13365.979391195977 12214.161839319342 10844.152524598141 12562.238807317279 1.0253877886662335 1.002170067924109 1.0637654241225905 0.9417283189833282 0.9241208205339589 0.9400427475191102 1.0812528756796849 1.063980680212076 0.9722918045631175 0.8632340692553637 1.0 13.6168059797968 -6.251561179551151 24.93105128568048 0.9886433198781063 1.027613984837229 0.11271929042624551 0.06109719342355515 1246.2700718002668 3145391.872363927 0.007028683662658526 0.01834745187528915 5.603234784068518e-07 6.251561179551151 0.038970664959122714 ADAASSLTVDVT(ph)PPTAK ddPTM_A549_MK2206_60min_R1 4 ADAASSLTVDVTPPTAK 17 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ADAASSLTVDVT(0.998)PPT(0.002)AK;ADAASSLT(0.002)VDVT(0.988)PPT(0.009)AK;ADAASSLTVDVT(0.999)PPT(0.001)AK;ADAASSLTVDVT(0.999)PPT(0.001)AK 190.86 1.1333e-39 51303800.0 5371.139999999999 6634.43 6110.289999999999 4935.610000000001 7630.21 5350.02 4894.16 5893.339999999999 7561.33 8427.220000000001 8732.2 True False 6277.657120234763 6972.094149058314 6976.821001742136 6144.834671567952 6507.816216678064 5916.155565344146 5783.3655209668395 6728.738992596808 5848.700827962828 6523.5051490415235 6563.753743540326 0.9564126512840122 1.0622114146070538 1.0629315593395514 0.9361769060296252 0.9914778145177503 0.9013372220379979 0.8811064136369375 1.0251358072686458 0.8910603682715531 0.9938680523262451 1.0 12.680305398035715 -6.270526285914503 24.829354850636545 0.947211541286585 1.0306878295058541 0.2820453862553317 0.052478915859548635 522.9475087748467 1428919.204641848 0.0077615034075564126 0.01828632338910076 5.363814056755908e-07 6.270526285914503 0.08347628821926911 ADAASSLTVDVT(ph)PPTAK ddPTM_A549_PD325901_60min_R1 3 ADAASSLTVDVTPPTAK 17 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ADAASSLTVDVT(1)PPTAK;ADAASSLTVDVT(0.994)PPT(0.006)AK;ADAASSLT(0.004)VDVT(0.982)PPT(0.014)AK 165.34 8.1882e-23 56409400.0 6697.3 6338.9 5928.4 6044.700000000001 6392.299999999999 6361.0 6149.999999999999 5782.2 6136.2 7255.700000000001 8311.5 True False 7377.20496570832 6873.101349371487 6330.736874365244 6418.067390490254 5943.326900237829 6309.198124982831 6384.041615409133 5666.8694849518515 5878.316853210302 6797.573863734496 7289.238190939513 1.012068034061248 0.9429107911324285 0.8685045965755817 0.8804853432376349 0.8153563849272144 0.8655497268322406 0.8758173965757444 0.7774295936708094 0.8064377510007864 0.9325492850794541 1.0 12.831552328901026 -5.465838627123302 2.696774312275818 0.8830222820217056 1.0145459431175077 0.337954382843458 0.05917115172705842 0.42263836761161494 5.153213257113497 0.011318230772287463 0.09917274964720517 3.421065370610291e-06 5.465838627123302 0.13152366109580205 ADADPS(ph)PTSPPTAR ddPTM_A549_PD325901_60min_R1 1 ADADPSPTSPPTAR 14 0 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 ADADPS(0.818)PT(0.086)S(0.086)PPT(0.01)AR 48.14 0.058817999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ADADPSPT(ph)SPPTARDTPGR ddPTM_A549_PD325901_60min_R1 1 ADADPSPTSPPTARDTPGR 19 1 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 ADADPS(0.004)PT(0.259)S(0.259)PPT(0.259)ARDT(0.22)PGR 53.909 0.004422 1432400.0 146.31 280.03 342.14 293.83 241.72 231.55 364.61 274.83 346.33 327.98 295.77 True False 161.1632834922707 303.62911086537025 365.35967785495654 311.9792117636527 224.74242108873 229.6643335701578 378.48543307224753 269.34830005003596 331.7749544950173 307.2712868265829 259.39216504050745 0.6213113008525256 1.1705407941598953 1.4085224116075399 1.2027318238965818 0.8664194658833799 0.8853942582818287 1.4591243841661221 1.0383825587329276 1.2790477092598627 1.1845819891229117 1.0 8.018991093312238 ADADPSPTS(ph)PPTAR ddPTM_A549_MK2206_60min_R1 2 ADADPSPTSPPTAR 14 0 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 ADADPS(0.009)PT(0.289)S(0.7)PPT(0.002)AR;ADADPS(0.018)PT(0.059)S(0.923)PPTAR 128.35 2.4343000000000002e-21 20350000.0 2983.9 3409.4 2482.0 3097.0 4614.8 3609.0 3223.6 3002.7 4571.2 4171.3 4488.1 True False 3487.509370649156 3582.9238972751828 2833.984921554294 3855.7651390296114 3935.969033188596 3990.9019845396842 3809.286393045732 3428.341920383085 3535.8304987064034 3229.0004329063336 3373.5809047414514 1.033770782182097 1.0620536452051608 0.8400524551141566 1.1429295007007143 1.1667036138533768 1.1829868905561474 1.1291522274423333 1.0162323113593241 1.0480941760539715 0.9571433216165307 1.0 11.720065045422842 -2.201995876132925 11.472736928534964 1.045992227705794 1.0639042042338491 0.0 0.09693915785186012 0.0 0.0 0.012555703512911933 0.0 0.006280643226042292 2.201995876132925 0.017911976528055096 ADADPSPTS(ph)PPTAR ddPTM_A549_PD325901_60min_R1 2 ADADPSPTSPPTAR 14 0 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 ADADPS(0.002)PT(0.132)S(0.857)PPT(0.009)AR;ADADPS(0.026)PT(0.049)S(0.908)PPT(0.018)AR 129.04 2.1748000000000003e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ADADPSPTSPPT(ph)ARDTPGR ddPTM_A549_MK2206_60min_R1 1 ADADPSPTSPPTARDTPGR 19 1 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 ADADPS(0.009)PT(0.064)S(0.064)PPT(0.431)ARDT(0.431)PGR 43.198 0.025092 1598200.0 132.57 281.48 220.54 281.0 540.36 401.42 197.4 175.88 478.17 510.82 431.79 True False 154.94457497468366 295.8061297017126 251.81588823512647 349.84501261456944 460.8737598105636 443.8979979589694 233.26502481301267 200.81152860991003 369.86525848058324 395.42540722010244 324.5646262022485 0.4773920583635378 0.9113936203182679 0.7758574653733535 1.0778901468965623 1.4199753226446055 1.3676721433048584 0.718701318570855 0.6187104582517774 1.139573535195133 1.2183256439464782 1.0 8.342361961122318 -5.064099906645629 1.128807369886197 1.0512439936040592 0.030928339434890102 0.32806197892485356 0.23881378982731835 2.224339261241223 1.70722432401076 0.035910569841052516 2.9757854104570125 8.627800479484278e-06 5.064099906645629 -1.0203156541691691 ADADPSPTSPPT(ph)ARDTPGR ddPTM_A549_PD325901_60min_R1 1 ADADPSPTSPPTARDTPGR 19 1 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 ADADPSPT(0.008)S(0.007)PPT(0.584)ARDT(0.4)PGR 71.592 0.00033939 2138400.0 635.78 738.64 688.16 813.38 823.11 818.66 686.06 586.32 623.41 800.61 898.66 True False 700.3239175635014 800.8877850573055 734.8626758422484 863.6206352799917 765.2975931753457 811.9931043858577 712.1683887264371 574.6253876408579 597.210245666672 750.0593479670429 788.1305170751008 0.8885887583220783 1.016186745349678 0.9324124112963685 1.0957837776477033 0.9710290067380054 1.0302774563270503 0.9036173239039477 0.7290992737768863 0.7577555147629995 0.9516943345255211 1.0 9.622290754411813 -7.909981823489207 5.864620926589999 0.8682795832098138 0.9911167921984617 0.32819162249390665 0.087119000426879 0.2467930093985953 13.050622855756647 0.017086094594406808 0.023707914901384297 1.2303202622830022e-08 7.909981823489207 0.12283720898864792 ADALQAGASQFETS(ph)AAK ddPTM_A549_MK2206_60min_R1 1 ADALQAGASQFETSAAK 17 0 Q15836;K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;P63027 Q15836 VAMP3;VAMP2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 1 ADALQAGASQFET(0.129)S(0.871)AAK 143.14 3.1264e-16 4317300.0 2777.3 2706.1 2433.9 2095.8 3525.7 2490.1 2209.8 3278.6 4322.0 3581.7 4638.0 True False 3246.0403415342016 2843.828931312365 2779.063618280015 2609.2710940840366 3007.074200466549 2753.600729205395 2611.292055885489 3743.351590291399 3343.0739008157784 2772.5914824013157 3486.2565977119198 0.9310962204172305 0.815725650595774 0.7971483281247727 0.7484449354062287 0.8625510246262811 0.7898445372645899 0.7490246293400541 1.073745286777862 0.9589293866119567 0.7952918566639665 1.0 11.76746304420675 -8.256589191317035 24.997254192218445 0.9870491207953584 0.8113546315777673 0.40844397090304363 0.08018780243879399 166.1180433079581 856151.343261316 0.008724470413881254 0.011078807242095982 5.538737828679379e-09 8.256589191317035 -0.17569448921759112 ADALQAGASQFETS(ph)AAK ddPTM_A549_PD325901_60min_R1 2 ADALQAGASQFETSAAK 17 0 Q15836;K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;P63027 Q15836 VAMP3;VAMP2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 1 ADALQAGASQFET(0.17)S(0.83)AAK;ADALQAGASQFET(0.208)S(0.792)AAK 199.49 3.4342999999999994e-48 10245500.0 6802.299999999999 5954.299999999999 6966.8 7167.200000000001 7698.799999999999 6894.0 6622.8 7244.5 6627.1 7844.6 6810.299999999999 True False 7492.864488411412 6456.089757617665 7439.6089427717125 7609.90166610779 7158.062847418144 6837.857549698414 6874.834278135221 7100.00276429969 6348.586033361042 7349.290617232194 5972.676274048647 1.2545237921177816 1.0809374996045666 1.2456072623753116 1.2741192251073288 1.1984682442140746 1.1448565493845682 1.1510475309044392 1.188747294935319 1.062938244442567 1.2304853435912728 1.0 12.544161812823479 -8.838069999174238 0.7281772154529474 1.0103346706595224 1.2048399467541977 0.0 0.0847612817782852 0.236415221880026 0.2645809166327445 0.014609316028587428 0.014174328488735002 1.4518775864702528e-09 8.838069999174238 0.19450527609467527 ADAPDAGAQS(ph)DSELPSYHQNDVSLDR ddPTM_A549_MK2206_60min_R1 2 ADAPDAGAQSDSELPSYHQNDVSLDR 26 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 ADAPDAGAQS(0.842)DS(0.158)ELPSYHQNDVSLDR;ADAPDAGAQS(0.927)DS(0.073)ELPSYHQNDVSLDR 159.75 3.7877e-41 24102000.0 2243.99 2230.49 1907.75 2077.76 2738.8 2397.5 2142.17 2055.27 2832.7 3002.6 3252.0 True False 2622.7206517118525 2344.012413806923 2178.297636621759 2586.8112932741924 2335.9261480664222 2651.2018586683002 2531.374560302386 2346.610816500396 2191.097972892376 2324.310574603733 2444.4386493659226 1.0729337193192292 0.9589164426012289 0.8911238730359629 1.0582434924047697 0.9556084169559141 1.0845851497872574 1.0355647751515522 0.9599794280413204 0.8963603866518548 0.9508565801832047 1.0 11.255287481635772 -8.415860218671966 6.945853845440928 0.9499167195496419 1.004436966093428 0.17634194523377544 0.05851277649199413 0.39712466423522486 22.752022806287272 0.010552633990572833 0.012754619444982303 3.838307647700215e-09 8.415860218671966 0.05452024654378618 ADAPDAGAQS(ph)DSELPSYHQNDVSLDR ddPTM_A549_PD325901_60min_R1 2 ADAPDAGAQSDSELPSYHQNDVSLDR 26 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 ADAPDAGAQS(0.766)DS(0.227)ELPS(0.006)Y(0.001)HQNDVSLDR;ADAPDAGAQS(0.991)DS(0.009)ELPSYHQNDVSLDR 202.81 7.066699999999998e-69 46568000.0 3136.3999999999996 3687.3999999999996 3618.8 3903.0 4006.2 4292.7 3321.8 3908.3 4262.5 4183.5 4981.4 True False 3454.8050191043512 3998.1501389314276 3864.3935296121977 4144.079445643866 3724.8183326397047 4257.741674440147 3448.2129167587063 3830.345890497963 4083.3619482430345 3919.353096039423 4368.719379696331 0.7908049748309753 0.9151766894236494 0.8845597974481966 0.9485799122057412 0.8526110305804573 0.9745971998632016 0.7892960424018791 0.8767662918107159 0.9346816751885008 0.8971400438889843 1.0 12.09299472335272 -9.424842799880672 0.9981305707357758 0.986601655986699 0.8829323057603664 0.10823694529575545 0.06136672115190951 0.3288788525425588 0.689628383131186 0.014500357420293234 0.01088831644098043 3.7597346951919087e-10 9.424842799880672 -0.10366935022633261 ADAT(ph)LIGK ddPTM_A549_MK2206_60min_R1 2 ADATLIGK 8 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 ADAT(1)LIGK;ADAT(1)LIGK 105.4 0.002106 9322900.0 3190.6000000000004 3363.7 2609.5 2384.9 3584.6000000000004 3418.1000000000004 2708.7 3451.3 4807.1 4781.5 4936.8 True False 3729.095277319345 3534.897962475667 2979.566338757427 2969.20060706223 3057.3100884909077 3779.801073248853 3200.8357280192868 3940.5323441629657 3718.2995253612967 3701.3558291040276 3710.8563112514444 1.004915028914647 0.9525828180837222 0.8029322853928025 0.8001389323697368 0.8238826384144916 1.0185792055026128 0.8625598674662348 1.061893000872908 1.0020057942117793 0.9974398140616194 1.0 11.857536423919473 -8.253041210394542 24.903380035913177 1.0055445827791067 0.8921110830925024 0.38698837948297826 0.07236270956567728 503.94138716477994 1494355.2755874193 0.011881414174414271 0.01520532003298826 5.5841720376844975e-09 8.253041210394542 -0.11343349968660432 ADAT(ph)LIGK ddPTM_A549_PD325901_60min_R1 2 ADATLIGK 8 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 ADAT(1)LIGK;ADAT(1)LIGK 103.7 0.002246 13620800.0 4889.0 4585.200000000001 5395.700000000001 5553.5 5755.299999999999 4886.299999999999 5842.5 6205.0 7026.3 7437.1 6980.9 True False 5385.327680908422 4971.6108957607985 5761.884648979918 5896.527082086399 5351.067582707129 4846.507592847601 6064.83953463867 6081.2364072716655 6731.009045616434 6967.520236776574 6122.293555571155 0.8796258513295054 0.812050394290019 0.9411317174977223 0.9631238731962937 0.8740298932313975 0.7916163360767606 0.9906156050161621 0.993293828868737 1.0994260540629193 1.1380571959729506 1.0 12.579856506432117 -7.957186186896842 5.0929871502448085 1.0422663707192061 0.8804967103533408 0.6630249676572165 0.060303791762072484 0.09760170441863299 5.92424731910497 0.009565832659114428 0.013202095521108705 1.1036053905082649e-08 7.957186186896842 -0.16176966036586538 ADDFPVRDDPS(ph)DVT(ph)DEDEGPAEPPPPPK ddPTM_A549_PD325901_60min_R1 1 ADDFPVRDDPSDVTDEDEGPAEPPPPPK 28 1 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 2 ADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPK 56.383 0.0021765 13292000.0 1661.1 1697.8 1608.0 1725.9 1879.9 1471.4 1829.4 1855.4 1805.5 1476.5 1835.6 True False 1829.7336491628112 1840.8795644296183 1717.1285496895136 1832.5049231967073 1747.8623093029275 1459.4174062411146 1899.0188180860916 1818.392591466858 1729.621113795379 1383.2735380189342 1609.8328368271145 1.1365985382489203 1.1435221858549507 1.066650220077429 1.1383200052053022 1.0857414939726666 0.9065645654970861 1.1796372732891607 1.1295536715792196 1.074410382387503 0.8592653264206517 1.0 10.652695173001185 -14.999999999960615 0.12905780600429656 0.6720495371241219 1.1357363132112472 0.3357964980582675 0.08005948764012596 83.09175708086808 0.7350422723194596 6.997702487802383 0.20687882725350748 1.0000000000906881e-15 14.999999999960615 0.4636867760871254 ADDGRPFPQVIK ddPTM_A549_MK2206_60min_R1 3 ADDGRPFPQVIK 12 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ;; 124.86 5.227e-06 33516200.0 10496.8 11888.099999999999 11204.2 10926.900000000001 14141.8 11419.300000000001 11578.2 11375.599999999999 16608.1 14586.999999999998 15503.3 False True 12268.40321787931 12493.153511819408 12793.124036292751 13603.99099052719 12061.559953529177 12627.682746482144 13681.809069351688 12988.126136313926 12846.391867685905 11291.786568888518 11653.402740687188 1.0527743261669729 1.0720605637527894 1.0978015881684318 1.1673835782770672 1.0350247238445585 1.0836047657044678 1.1740612912640902 1.1145350783223709 1.1023725991064792 0.9689690487966997 1.0 13.508463656345324 -10.537219141697417 0.8461962102189766 1.0000517156007862 1.1009480958637154 0.5178901484771818 0.04189630316574566 0.44092800492909234 0.566776072623881 0.027219836602404943 0.007697206015925108 2.9025576763264587e-11 10.537219141697417 0.10089638026292924 ADDGRPFPQVIK ddPTM_A549_PD325901_60min_R1 2 ADDGRPFPQVIK 12 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 131.69 6.4221e-08 63312000.0 8901.900000000001 8036.1 9870.2 9325.099999999999 10501.7 8959.5 9749.7 9740.9 8427.1 9774.9 11179.5 False True 9805.614334767586 8713.330349695407 10540.051126334227 9901.090248161316 9764.09682089821 8886.536802512754 10120.730168740556 9546.61010791178 8072.93829302965 9157.711145805126 9804.492372689434 1.0001144334694245 0.888707953301746 1.0750226249034271 1.0098524096709949 0.9958798935981892 0.906373982937285 1.0322543772823984 0.9736975403748602 0.8233917663618103 0.9340321556385798 1.0 13.25922722151888 -8.549950292090932 24.961656867485157 0.9156512900742395 0.9859430969188032 0.184195233306373 0.062305272500461584 302.44422806944846 278871.0034882771 0.012989871164817155 0.014729262086392607 2.818705532508698e-09 8.549950292090932 0.07029180684456371 ADDLLPLGDQT(ph)QDGDFGSR ddPTM_A549_MK2206_60min_R1 1 ADDLLPLGDQTQDGDFGSR 19 0 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 ADDLLPLGDQT(0.997)QDGDFGS(0.003)R 99.569 3.7115000000000004e-07 2038800.0 393.79 581.01 533.08 519.42 565.51 581.77 730.01 553.99 920.01 780.41 677.21 True False 460.25212475884945 610.5809273056414 608.6787598638856 646.6779233176494 482.3242281265669 643.3325152523281 862.6433675975046 632.5197790232204 711.6292039540773 604.114838981716 509.04006695482684 0.904156970417209 1.1994751826869956 1.195738409169078 1.2703870781453375 0.9475172180687482 1.263815084539148 1.6946472853463168 1.2425736598831452 1.3979826936044086 1.1867726691842635 1.0 8.991635406236908 -5.249397468522066 3.6815462196223643 1.2233309525906404 0.8652080883616131 0.20663612388205388 0.18707038346954288 0.43525163087672325 10.624841248882419 0.02924371389874805 0.4305487535537872 5.631220477518183e-06 5.249397468522066 -0.3581228642290273 ADDLLPLGDQT(ph)QDGDFGSR ddPTM_A549_PD325901_60min_R1 2 ADDLLPLGDQTQDGDFGSR 19 0 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 ADDLLPLGDQT(1)QDGDFGSR;ADDLLPLGDQT(1)QDGDFGSR 189.64 1.018e-43 9595700.0 2342.4 2248.77 2634.8999999999996 2562.2 2029.7 2349.1 2374.3 2739.3 2808.6 1982.77 2325.5 True False 2580.1987236162613 2438.2817399590026 2813.7201589408573 2720.4612748216014 1887.1408740848728 2329.969708441621 2464.6552857668144 2684.6625125607206 2690.564309169593 1857.5775638183547 2039.4782425590856 1.2651268691048616 1.1955419229672726 1.3796274459933795 1.3339006114662129 0.9253057153073309 1.142434206857747 1.2084734391057919 1.3163477092023665 1.3192414868783013 0.9108101891234267 1.0 10.993984401000887 -10.907417377873987 1.1617235978145248 1.000072905013401 1.2354448862965735 0.4205658980711098 0.12164839252373984 0.46437993117267945 1.1138353564891892 0.08725164037222387 0.02078347074356729 1.2376066153621228e-11 10.907417377873987 0.2353719812831725 ADDPLRLDQELQQPQT(ph)QEK ddPTM_A549_MK2206_60min_R1 1 ADDPLRLDQELQQPQTQEK 19 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ADDPLRLDQELQQPQT(1)QEK 51.833999999999996 0.0055417999999999995 1035900.0 861.89 672.19 822.5 501.59 1319.4 806.68 917.3 682.31 1062.4 1160.2 1166.5 True False 1007.3559608126279 706.401599844373 939.1428678398088 624.4795725172305 1125.318007798611 892.0423421691536 1083.9615362764762 779.0295319867392 821.7680963041832 898.1100142061058 876.8258562378073 1.1488666234534706 0.8056350013163698 1.0710711381954277 0.7122047873869529 1.2833996623080983 1.0173540570491793 1.2362335446258679 0.8884655105054927 0.937207873670765 1.02427409937433 1.0 9.776146531544944 -4.936680517043078 18.60639639631963 0.9860008903876883 3.6043231753481235 0.06492347726600844 0.15963972627650236 233.8763664745219 77366.48984283001 0.019293011360227368 3093.715014013355 1.156963033678275e-05 4.936680517043078 2.6183222849604353 ADDS(ph)SNKEAAEEK ddPTM_A549_PD325901_60min_R1 1 ADDSSNKEAAEEK 13 1 Q3KNV8;Q3KNV8-2 Q3KNV8 PCGF3 Polycomb group RING finger protein 3 1 ADDS(0.5)S(0.5)NKEAAEEK 43.798 0.0189 21243000.0 8354.2 7888.8 7791.0 7249.2 8713.1 6415.6 6963.6 7254.9 7216.3 7226.1 7922.7 True False 9202.31223396301 8553.616861746004 8319.744111088936 7696.9666198722825 8101.121914563183 6363.3534806854 7228.603608628134 7110.195328141051 6913.02400635923 6769.842812786055 6948.258126133244 1.3244056376305298 1.23104477503143 1.197385583560485 1.1077548473513175 1.1659212665248975 0.9158199602216927 1.040347591785699 1.0233061580425087 0.9949290715551435 0.9743222963067323 1.0 12.76243563548285 -6.131057835731562 0.6576297954995458 0.9960737115217309 1.3573987146789805 0.8392810689799131 0.04838069124209106 0.3562400474998759 0.1919210953753975 0.0077437606297082505 0.07748012954593142 7.395067871294043e-07 6.131057835731562 0.3613250031572497 ADDTDSQSWRS(ph)PLK ddPTM_A549_MK2206_60min_R1 4 ADDTDSQSWRSPLK 14 1 O75369-8 O75369-8 FLNB Filamin-B 1 ADDTDSQS(0.001)WRS(0.999)PLK;ADDTDSQS(0.001)WRS(0.999)PLK;ADDTDSQSWRS(1)PLK;ADDTDSQS(0.011)WRS(0.989)PLK 222.57 5.8837e-47 993736000.0 45662.0 39631.3 27656.9 24919.4 51971.100000000006 37321.2 35497.1 36622.4 53778.0 56219.4 57552.8 True False 53368.62927128315 41648.36389103128 31579.064293688552 31024.654118674363 44326.220035699866 41270.50461219244 41946.46358809517 41813.73735139624 41597.36886581925 43519.398493930996 43260.851383526184 1.2336472252510045 0.9627264041061165 0.7299686271480529 0.717153110178701 1.0246266224103804 0.9539919648439542 0.9696171537684638 0.9665491088166376 0.9615476241334355 1.005976468380446 1.0 15.400774437699654 ADDTDSQSWRS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 ADDTDSQSWRSPLK 14 1 O75369-8 O75369-8 FLNB Filamin-B 1 ADDTDSQS(0.054)WRS(0.946)PLK;ADDTDSQS(0.098)WRS(0.902)PLK 203.89 3.0216999999999996e-32 1419400000.0 21377.9 18187.0 14929.199999999999 16833.2 15234.8 16789.4 14966.0 13435.7 25130.2 23220.9 31076.0 True False 23548.168670421805 19719.682317282044 15942.38528857258 17872.94853302903 14164.760205206774 16652.67269290782 15535.539319709444 13167.714423397249 24074.065086624567 21754.72841109641 27253.849006994675 0.8640309361212866 0.723555865896997 0.5849590376933907 0.6557953897976743 0.5197343025409512 0.6110209493211006 0.5700310189479021 0.48315063387992524 0.8833271616220513 0.7982259095041248 1.0 14.734172372784684 -8.90218137804013 5.369972107615339 0.9496293553800425 0.6239140528259531 0.5352664951732459 0.1088088828647819 0.08954566756290551 3.9671711034649353 0.018547386918737262 0.019582635316798207 1.2526179243743435e-09 8.90218137804013 -0.3257153025540893 ADEAS(ph)ELACPTPK ddPTM_A549_MK2206_60min_R1 1 ADEASELACPTPK 13 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEAS(1)ELACPTPK 139.3 5.3474e-09 6942100.0 2429.3 2673.5 2273.6 2399.5 2846.1 2619.1 2338.9 2094.6 3278.8 3317.7 3578.5 True False 2839.306449317334 2809.569730558222 2596.03066786698 2987.3776077176476 2427.442460205872 2896.251423582126 2763.8478547880213 2391.5159644434702 2536.157035167694 2568.229265757278 2689.859688424343 1.0555593146869804 1.0445041957575127 0.9651175037266253 1.1106072263076234 0.9024420383904155 1.0767295543503543 1.0275063293011462 0.889085767088604 0.9428584866645278 0.9547818708944208 1.0 11.393315203877481 ADEAS(ph)ELACPTPK ddPTM_A549_PD325901_60min_R1 1 ADEASELACPTPK 13 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEAS(1)ELACPTPK 155.43 2.4556000000000002e-18 11401000.0 6492.3 8363.4 7315.5 8187.7 7548.5 6016.6 6676.1 6215.6 7770.3 7346.7 8079.5 True False 7151.393516621345 9068.213069354852 7811.973821675151 8693.435633384133 7018.319400911291 5967.60280439737 6930.162638802099 6091.624981956127 7443.741312946126 6882.828108204336 7085.772720170337 1.0092609231261698 1.2797775807204916 1.1024872134887438 1.2268860400556496 0.9904804568361283 0.842195063272353 0.9780390809141705 0.8596980488261678 1.0505193444543877 0.9713588595089566 1.0 12.790709475669852 -6.775820231059973 24.830213823409494 0.9923176428224187 1.1598214254088468 0.5054900388548664 0.08998007726560352 152.1273577001241 262665.60039866687 0.013070829767158317 0.024784621179316728 1.675636334140212e-07 6.775820231059973 0.16750378258642806 ADEASELACPT(ph)PK ddPTM_A549_MK2206_60min_R1 2 ADEASELACPTPK 13 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEASELACPT(1)PK;ADEASELACPT(1)PK 141.0 2.9314e-12 92757000.0 34617.0 35397.0 30610.0 26937.0 46159.0 35169.0 32280.0 32602.0 46763.0 35391.0 34618.0 True False 40459.50329560701 37198.556107188866 34950.95827912044 33536.56620924789 39369.07224645756 38890.56023670717 38144.858160912096 37223.43333943761 36171.25516516617 27396.148519883016 26021.395191804913 1.554855264192336 1.4295373415989643 1.3431623485787483 1.2888073818505235 1.5129500918865533 1.4945609161247135 1.4659036488914055 1.4304933715145538 1.3900582539308968 1.052831653258587 1.0 14.667410696806382 -10.429768907670866 0.6161598435151003 0.970439898709045 1.440464300534379 0.82410626184686 0.07271825107474264 0.28756352262522744 0.18259627488479732 0.07060929981645575 0.016838736550706487 3.717329792235693e-11 10.429768907670866 0.4700244018253339 ADEASELACPT(ph)PK ddPTM_A549_PD325901_60min_R1 1 ADEASELACPTPK 13 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEASELACPT(1)PK 111.81 4.2086e-05 50538000.0 22873.0 24112.0 24719.0 22108.0 23277.0 22087.0 24938.0 24430.0 23457.0 27586.0 32558.0 True False 25195.050121787357 26144.002861071353 26396.57998742233 23473.560949089057 21642.103821290628 21907.130794921508 25887.029236597213 23942.724485035746 22471.1838639148 25844.21525214378 28553.572402166712 0.8823782105763935 0.9156123266413937 0.9244580543420653 0.8220884104613063 0.7579473249956064 0.767229069846936 0.9066126252781191 0.838519403029896 0.7869832729655094 0.9051131987317517 1.0 14.801383635276597 -10.900819477210742 1.1164551956151825 1.0012468659610398 0.8407028890504922 0.271418262339681 0.06177056953367512 0.3570875122652998 0.7803683228015094 0.04498345155248242 0.010390874445820712 1.2565521650426794e-11 10.900819477210742 -0.16054397691054767 ADEASELACPT(ph)PKEDGLAQQQTQLNLR ddPTM_A549_MK2206_60min_R1 1 ADEASELACPTPKEDGLAQQQTQLNLR 27 1 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEASELACPT(0.999)PKEDGLAQQQT(0.001)QLNLR 61.099 0.00026569 86523000.0 2658.7 2930.8 2604.9 2146.9 2692.1 2265.9 2043.5 2060.0 3591.6 3518.5 3510.0 True False 3107.423561025806 3079.9652015410643 2974.3139895877453 2672.8905963780035 2296.0956562033057 2505.67603401731 2414.7774985075544 2352.0113084854133 2778.108334606649 2723.6684062956238 2638.370128928165 1.1777815125159083 1.1673741935489155 1.1273300728264601 1.0130840123875502 0.8702704867023688 0.9497060350039812 0.9152535014063987 0.8914637422160763 1.052963837085001 1.0323299132415933 1.0 11.365431254752668 -6.204313590813797 3.210107737394094 0.9905483572535807 1.167479107848548 0.6711276559103809 0.05854138367213193 0.15101015819943642 3.0900051175285697 0.009939875685422825 0.028615184396968307 6.247214375597039e-07 6.204313590813797 0.17693075059496732 ADEASELACPT(ph)PKEDGLAQQQTQLNLR ddPTM_A549_PD325901_60min_R1 2 ADEASELACPTPKEDGLAQQQTQLNLR 27 1 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEASELACPT(1)PKEDGLAQQQTQLNLR;ADEASELACPT(1)PKEDGLAQQQTQLNLR 201.8 5.005899999999998e-69 305490000.0 5878.0 6490.3 6774.299999999999 6864.6 6910.200000000001 6491.700000000001 7658.6 8521.7 5965.700000000001 7676.3 9244.0 True False 6474.730232845104 7037.260358709831 7234.044735175172 7288.610751362253 6424.851390895838 6438.833747516276 7950.052213946727 8351.728008355674 5714.982375280582 7191.617107954447 8107.046602544049 0.7986546211308675 0.8680424208368913 0.8923156717644964 0.8990463616028844 0.7925020918073512 0.7942268082553916 0.9806348234697385 1.0301813246928717 0.7049401163534917 0.8870822459189598 1.0 12.984960720943906 ADEGISFR ddPTM_A549_MK2206_60min_R1 3 ADEGISFR 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ;; 133.6 0.0029866999999999997 52302000.0 4276.1 4830.1 4134.6 3934.7000000000003 5738.5 4177.6 4336.5 4397.4 6116.4 6238.8 5876.1 False True 4997.801139392355 5075.931458974855 4720.948451514254 4898.701676635393 4894.3742517449855 4619.670859133552 5124.385917434799 5020.744916472701 4731.045165883761 4829.4507469652235 4416.902197890252 1.131517275111858 1.1492062154782123 1.0688369902709711 1.1090808573880748 1.1081011153207783 1.0459074374207682 1.1601764512427917 1.1367118155504727 1.0711229169039695 1.0934022377203703 1.0 12.10881917224032 -9.715992380863382 0.7637839433425072 1.0071749535846628 1.112186013345753 0.1673738415431758 0.04194631876783439 0.2856703986047642 0.35224465956370665 0.013509748562670322 0.007446049910393571 1.9231254673704687e-10 9.715992380863382 0.10501105976109026 ADEGISFR ddPTM_A549_PD325901_60min_R1 2 ADEGISFR 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 131.03 0.002947 95161000.0 10722.4 9563.6 10117.4 9578.2 11735.7 10396.9 10999.0 10189.7 12185.4 10864.4 12598.2 False True 11810.930154586316 10369.558135457115 10804.027604868586 10169.823660329514 10911.424917967108 10312.231093481214 11417.572963883742 9986.458439834996 11673.290013869952 10178.4199298699 11048.701266569706 1.0689880982050717 0.9385318586567737 0.9778549844187178 0.9204542158362602 0.9875753407309547 0.9333432812309945 1.0333859779909282 0.9038581276562558 1.0565305127028892 0.9212322502253696 1.0 13.43158917573658 -8.7868684978014 24.999950845403077 1.0266949618773478 0.9694373421952656 0.0 0.0572734410083789 228.50743110794434 224649.9121927451 0.0078502422841223 0.008358673913755705 1.6335465027330644e-09 8.7868684978014 -0.057257619682082206 ADEGLPANESFLNGNLAGAS(ph)LSPLHTK ddPTM_A549_MK2206_60min_R1 1 ADEGLPANESFLNGNLAGASLSPLHTK 27 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 ADEGLPANES(0.051)FLNGNLAGAS(0.47)LS(0.47)PLHT(0.009)K 44.021 0.013644 4252400.0 431.96 736.16 214.7 336.91 629.92 420.05 571.39 524.12 551.67 900.71 740.4 True False 504.8642875919467 773.627399606412 245.14768841970456 419.4529651244645 537.2596024499784 464.49941219337626 675.2041668080407 598.4156150501824 426.71762583596455 697.2389854297376 556.5382459995482 0.9071511099568826 1.390070503091786 0.4404866874502343 0.7536821919060079 0.9653597148297596 0.8346226257265226 1.2132215021366004 1.0752461656528602 0.766735491950918 1.2528141424988493 1.0 9.120337024543957 -4.9898149554296785 17.637552953367774 0.9151382177673703 0.8951962596765035 0.0 0.2600115175057359 34300.73889770281 1601.329957005291 0.03120563220458645 16722.603704085097 1.0237290907483217e-05 4.9898149554296785 -0.01994195809086674 ADEGLPANESFLNGNLAGASLS(ph)PLHTK ddPTM_A549_MK2206_60min_R1 1 ADEGLPANESFLNGNLAGASLSPLHTK 27 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 ADEGLPANESFLNGNLAGAS(0.055)LS(0.943)PLHT(0.001)K 125.68 9.798000000000002e-19 5151700.0 1124.9 1686.8 1176.5 1356.0 1622.3 1656.9 1034.6 1297.4 2005.4 2226.0 2414.0 True False 1314.755618835496 1772.6509150946736 1343.3453908979163 1688.2200608731532 1383.6618190478157 1832.2320582387936 1222.5734279206831 1481.3104231208629 1551.1801019657462 1723.145053975859 1814.5371769893432 0.7245680251186265 0.9769162834325793 0.7403239834009782 0.9303860412902789 0.7625425571845101 1.0097517325485772 0.6737659847505364 0.8163571636369744 0.8548626733233674 0.9496333697802098 1.0 10.825385900315768 -10.301624378327812 0.7628982326917884 0.997901397936273 0.8345369721856836 0.21944877220312253 0.10227807086594509 0.6186800641100982 0.6749053771221116 0.05525897354232768 0.018331087103292985 4.993161597336979e-11 10.301624378327812 -0.1633644257505894 ADEGLPANESFLNGNLAGASLS(ph)PLHTK ddPTM_A549_PD325901_60min_R1 2 ADEGLPANESFLNGNLAGASLSPLHTK 27 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 ADEGLPANESFLNGNLAGAS(0.04)LS(0.954)PLHT(0.006)K;ADEGLPANESFLNGNLAGAS(0.061)LS(0.937)PLHT(0.002)K 139.54 1.2829000000000002e-25 16037100.0 2112.83 2724.5 2760.61 3231.6 3499.7 4156.9 3140.5 3373.5 3821.7 3988.8 4032.2 True False 2327.3229462167606 2954.1031766335827 2947.9615954964993 3431.208592503897 3253.8931453095647 4123.0475846158 3260.01344604754 3306.2128960404452 3661.087239319744 3736.9464872671356 3536.2649622217746 0.6581302507249184 0.8353738218692669 0.8336370795146373 0.9702917143256503 0.9201497003395355 1.1659328779553215 0.9218804249326752 0.9349449012902044 1.035297772771966 1.0567495725544491 1.0 11.788010660455404 -5.182107302572329 0.6703604329430788 1.0124346195729017 0.4204198826035716 0.7115065866942976 0.06884694472974458 1.2163168660794705 0.34820408660276414 0.01059022170553521 0.5606169689244711 6.574953677327619e-06 5.182107302572329 -0.59201473696933 ADEICIAGSPLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 ADEICIAGSPLTPR 14 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 ADEICIAGS(0.144)PLT(0.856)PR;ADEICIAGS(0.07)PLT(0.93)PR 83.314 0.00033839 2578700.0 1135.65 1637.01 1573.43 1554.04 2022.6999999999998 1444.76 1493.1100000000001 1663.67 2303.9 2183.75 2224.7200000000003 True False 1327.3199560232295 1720.3268167649576 1796.566033489595 1934.7798697635064 1725.1635094544886 1597.643544245928 1764.3887598711103 1899.5003172756926 1782.070328572298 1690.439358319757 1672.2606248515856 0.7937279251199436 1.028743242051542 1.0743337532383994 1.1569846476144947 1.031635549995443 0.9553795147139341 1.0550919717001057 1.1358877253025526 1.065665424449289 1.010870753755734 1.0 10.707583996243013 -5.263513282387177 4.681051259192952 1.0459251986111249 0.7790611735349798 0.6434018687387512 0.05515076245034828 0.09350957733214384 5.55911887100199 0.007992606242036427 0.08116646511949302 5.45113223785591e-06 5.263513282387177 -0.26686402507614504 ADEVTLSEAGS(ph)TAGAAETR ddPTM_A549_PD325901_60min_R1 1 ADEVTLSEAGSTAGAAETR 19 0 O75781-2;O75781;A0A087WWY4;A0A087WTK8 O75781-2 PALM Paralemmin-1 1 ADEVT(0.001)LS(0.136)EAGS(0.421)T(0.421)AGAAET(0.021)R 54.974 0.0097172 900490.0 603.07 931.68 398.33 680.17 618.9 508.61 373.7 464.71 451.98 561.05 752.7 True False 664.2932224433307 1010.1959433312439 425.36306915287594 722.1825561218523 575.4305990890907 504.46804878910814 387.9213579964862 455.4409944920573 432.98485240278893 525.6252072506078 660.1226717584275 1.0063178419153425 1.5303154800611456 0.6443697320981243 1.0940126540391506 0.8717025239509878 0.7642034887929416 0.5876504089204293 0.6899338774092679 0.6559157425231414 0.7962538324133803 1.0 9.366590337719241 -5.7686773581841875 24.99998251486773 0.8128267351396479 1.2683166891461561 0.49608427232282104 0.1849564154648125 98.4749371157384 340137.64352446754 0.02716988285975542 0.08702899790544642 1.7034235292134984e-06 5.7686773581841875 0.45548995400650827 ADFS(ph)PFGNSQGPSR ddPTM_A549_MK2206_60min_R1 1 ADFSPFGNSQGPSR 14 0 Q9H2M9 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit 1 ADFS(0.748)PFGNS(0.105)QGPS(0.148)R 44.196000000000005 0.060699 2005100.0 2402.2 2218.3 2072.9 2216.5 3076.8 1988.0 2125.2 2456.7 3526.9 2832.5 3499.0 True False 2807.632631848723 2331.201994874623 2366.8683899636962 2759.542599502465 2624.2067958123125 2198.3688404724026 2511.3213309656257 2804.9447483282106 2728.06278130198 2192.636282743315 2630.101732512722 1.0674996321022128 0.8863543056364824 0.8999151480359125 1.0492151559727232 0.9977586658996732 0.8358493564323635 0.9548380961547002 1.066477662690427 1.0372461063305218 0.833669760997623 1.0 11.360902888800595 -8.183583011401154 9.60104722649762 1.0217306208254557 0.9515710714139249 0.0 0.08713108638297923 0.5843297599001833 69.26438095420043 0.010437655041953622 0.013480347399778837 6.552650259717182e-09 8.183583011401154 -0.0701595494115308 ADFS(ph)PFGNSQGPSR ddPTM_A549_PD325901_60min_R1 2 ADFSPFGNSQGPSR 14 0 Q9H2M9 Q9H2M9 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit 1 ADFS(0.994)PFGNS(0.005)QGPS(0.001)R;ADFS(0.888)PFGNS(0.028)QGPS(0.083)R 86.54799999999999 9.892600000000001e-05 7794500.0 6154.700000000001 6414.299999999999 5960.200000000001 6578.3 6766.3 6138.3 5621.4 6305.5 6111.0 6305.1 6221.2 True False 6779.52061314933 6954.8555719878095 6364.695013594184 6984.6266505967305 6291.058430467784 6088.311719946882 5835.325453148111 6179.731855930947 5854.175921574944 5906.994909964901 5456.031839436069 1.2425735062884191 1.2747094915609323 1.1665428650159846 1.2801660357096918 1.1530465025874963 1.1158863985984664 1.0695182185284398 1.1326421908435342 1.0729731962451354 1.0826540393824833 1.0 12.41363634809721 -6.873763596968248 0.24432065566138783 0.9883463517525739 1.3625693483681565 0.7284993431860848 0.044971432280759775 1.198403021931134 0.11369443919817748 0.03174318889857428 0.13584683398275904 1.3373232744613891e-07 6.873763596968248 0.37422299661558256 ADFTVVAGDEGSSTTGGS(ph)SEENKGPSGSAVSR ddPTM_A549_MK2206_60min_R1 2 ADFTVVAGDEGSSTTGGSSEENKGPSGSAVSR 32 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 ADFTVVAGDEGSS(0.003)T(0.016)T(0.014)GGS(0.947)S(0.019)EENKGPSGSAVSR;ADFTVVAGDEGS(0.009)S(0.076)T(0.076)T(0.076)GGS(0.688)S(0.069)EENKGPS(0.002)GS(0.002)AVS(0.003)R 176.22 3.0453e-63 19781000.0 2242.77 3004.2 2379.8199999999997 2547.9 4493.3 1825.1 2466.0 2809.6 4226.299999999999 4407.0 4613.9 True False 2621.29474553799 3157.1009480243183 2717.3142610851482 3172.135614379579 3832.341522238516 2018.2308705966711 2914.040279578973 3207.869404039137 3269.04979801428 3411.4556392055742 3468.1412928380823 0.7558212091736629 0.910314973194408 0.7835073694075162 0.914650052156245 1.1050130887552156 0.581934442741545 0.8402311306049263 0.9249534932915154 0.9425941799906082 0.9836553217282216 1.0 11.759946960132003 -8.57017340751657 2.2845005692655342 0.9744127758999527 0.84618314238145 0.19572831969628757 0.12051197961982318 0.3732527080708705 3.8775896592998875 0.02093013040957996 0.024172167629430783 2.690460327464034e-09 8.57017340751657 -0.1282296335185027 ADFTVVAGDEGSSTTGGS(ph)SEENKGPSGSAVSR ddPTM_A549_PD325901_60min_R1 2 ADFTVVAGDEGSSTTGGSSEENKGPSGSAVSR 32 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 ADFTVVAGDEGSS(0.001)T(0.004)T(0.024)GGS(0.942)S(0.03)EENKGPSGSAVSR;ADFTVVAGDEGS(0.019)S(0.019)T(0.107)T(0.107)GGS(0.625)S(0.12)EENKGPSGS(0.001)AVS(0.001)R 183.27 2.4066999999999993e-76 28163000.0 4018.5 4135.4 3876.0 4654.2 5167.0 2618.1 3287.1 5202.6 4704.299999999999 5632.0 4827.700000000001 True False 4426.455161736654 4483.904671187563 4139.048668281439 4941.679363544883 4804.087745182312 2596.7790616282873 3412.1923892701375 5098.830061639258 4506.59463064392 5276.394558836864 4233.923505311757 1.045473579336838 1.0590424379567052 0.9775917451245184 1.1671631188766627 1.134665692272249 0.6133268724317867 0.805917344748742 1.2042801565126091 1.064401523785226 1.2462186792504053 1.0 12.04777948893808 ADGAST(ph)PR ddPTM_A549_MK2206_60min_R1 1 ADGASTPR 8 0 O60353-2;O60353 O60353-2 FZD6 Frizzled-6 1 ADGAS(0.117)T(0.883)PR 57.59 0.017357 14805000.0 838.57 961.06 802.82 612.12 568.38 466.7 512.54 532.4 764.61 1492.5 1522.9 True False 980.1001149318882 1009.9738489808439 916.6719479138675 762.0894274791114 484.7720549284329 516.0858842296122 605.6618835747793 607.8693304066186 591.4270558312703 1155.3432134137322 1144.7219000982068 0.8561905864191158 0.8822875223180383 0.8007813494572135 0.6657419827590709 0.42348456414334684 0.45083953070639843 0.5290908503828039 0.5310192199122502 0.5166556661321245 1.0092785097538661 1.0 10.160781435752138 -6.089501915374172 3.5893027717771915 0.679455374320066 0.8656117745325977 0.1715521909076052 0.19100615605199603 0.4563508335230071 10.95498443516269 0.03317879499483027 0.09919749819925572 8.137632718209365e-07 6.089501915374172 0.18615640021253177 ADGAST(ph)PR ddPTM_A549_PD325901_60min_R1 2 ADGASTPR 8 0 O60353-2;O60353 O60353-2 FZD6 Frizzled-6 1 ADGAS(0.088)T(0.912)PR;ADGAS(0.147)T(0.853)PR 78.149 0.0045935 42258000.0 2915.1 2858.7 2509.0 2684.5 2934.2 2179.93 1695.8600000000001 1920.0900000000001 2945.8 2968.1000000000004 3566.6 True False 3211.0388060168025 3099.612681608523 2679.275827842656 2850.3154680581483 2728.1119144404756 2162.177372833488 1760.3968803102005 1881.7922986685344 2821.998270295446 2780.6936594608846 3127.9308105401997 1.0265696399666366 0.9909466894739957 0.8565649274639613 0.9112463288680908 0.8721778324659699 0.6912484654544119 0.5627991752177461 0.6016093106431422 0.9021933160369624 0.8889882250882185 1.0 11.61099288541652 -5.684544131753727 4.517643193776487 0.8727133248092485 1.017573224253271 0.11708279009258049 0.14201432439874898 0.4107200869075973 15.282538174570652 0.024005492590787603 0.10000177794415728 2.0675492728453157e-06 5.684544131753727 0.14485989944402244 ADGAT(ph)SDDLDLHDDR ddPTM_A549_MK2206_60min_R1 2 ADGATSDDLDLHDDR 15 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ADGAT(0.5)S(0.5)DDLDLHDDR;ADGAT(0.608)S(0.392)DDLDLHDDR 97.551 1.5188e-05 2620600.0 594.35 592.13 589.06 427.04 999.42 732.14 625.4 749.38 1167.53 862.03 794.02 True False 694.6617495376269 622.2668878082816 672.5975656288364 531.6648191705541 852.4066419236686 809.6145688448005 739.0270846912769 855.6069098799994 903.0863191622964 667.296824294164 596.8429201628328 1.163893758424925 1.0425974184941533 1.1269255995284921 0.8907952179871773 1.4281925999743987 1.3564952209266696 1.2382271108948613 1.4335545936384229 1.5131055235034256 1.1180442990127282 1.0 9.221207476171493 -6.764997569269011 24.999993003245322 1.2814150894664638 1.0601542212071446 0.3651786146531377 0.15254459667207446 112.63704971571362 791401.4191504378 0.02957300998088138 0.05750796114070076 1.7179180022575103e-07 6.764997569269011 -0.22126086825931912 ADGAT(ph)SDDLDLHDDR ddPTM_A549_PD325901_60min_R1 1 ADGATSDDLDLHDDR 15 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ADGAT(0.567)S(0.433)DDLDLHDDR 112.15 2.0228e-06 2170800.0 446.8 316.66 232.65 476.54 700.96 350.46 228.03 578.36 497.79 561.81 503.77 True False 492.15880708322453 343.3460495183668 248.4390280381004 505.97479349913567 651.7269877807222 347.60596995464255 236.70780643280398 566.824156085357 476.8696174113551 526.3372207209059 441.809483661144 1.113961617584237 0.7771359878315875 0.5623216278187602 1.1452329843765978 1.4751312769025557 0.786777972881286 0.5357689574050712 1.282960590588173 1.0793557744837847 1.1913216899721246 1.0 8.787280576969621 -6.2884939365256045 24.59088336797256 1.0390474639630574 0.8137392102513298 0.1422809107756381 0.26265918248905507 892.9150646165984 811601.911505474 0.035898536713187705 0.08344247354685017 5.146429922370087e-07 6.2884939365256045 -0.22530825371172758 ADGATS(ph)DDLDLHDDR ddPTM_A549_PD325901_60min_R1 2 ADGATSDDLDLHDDR 15 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ADGAT(0.451)S(0.549)DDLDLHDDR;ADGAT(0.1)S(0.9)DDLDLHDDR 114.56 1.0984e-06 11229600.0 964.7 698.3599999999999 741.0200000000001 665.6899999999999 723.3800000000001 368.76 586.96 493.24 513.0600000000001 629.03 554.75 True False 1062.6356338253956 757.2132480946335 791.310073315251 706.808159408318 672.5722843255232 365.7569408219885 609.2970839968364 483.4019412607053 491.4978724142106 589.3129384490683 486.5192668499901 2.1841594079213333 1.5563890264763292 1.6264722226493815 1.4527855473938511 1.382416545762204 0.7517830551503387 1.252359619675047 0.9935925958092715 1.0102331108004312 1.2112838660319136 1.0 8.926353128673286 -4.467273393531612 0.4106001920584865 0.986365551562086 3.889101250798791 0.7896381798316933 0.17279930409498295 2.399765002712071 0.16741096008610015 0.03365795364546681 3.9316519649558743 3.409781942246283e-05 4.467273393531612 2.9027356992367053 up ADGATSDDLDLHDDRLS(ph)YLSAPGSEYSMYSTDSR ddPTM_A549_MK2206_60min_R1 2 ADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSR 34 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ADGATSDDLDLHDDRLS(0.989)Y(0.001)LS(0.009)APGSEYSMYSTDSR;ADGATSDDLDLHDDRLS(0.991)Y(0.001)LS(0.008)APGSEYSMYSTDSR 99.846 7.6973e-11 19131600.0 1150.3200000000002 981.5799999999999 960.51 879.8199999999999 1708.53 874.3 1041.1100000000001 1083.75 1557.2 1549.22 1700.53 True False 1344.4658933761646 1031.5382293328369 1096.7247610806266 1095.37593949662 1457.207500276005 966.8178456866302 1230.2662106538778 1237.3748813451787 1204.4966863374195 1199.2501260199813 1278.2414687596047 1.051809009670781 0.806997937826124 0.8579949781670592 0.8569397615925918 1.1400095646169792 0.75636557670502 0.9624677658499988 0.968029055219056 0.9423076279212358 0.9382031136759504 1.0 10.319944681882497 -9.864584430341257 0.27427888025705915 1.0219082298554947 0.9015838368789965 0.01631379923417864 0.10450385511879963 5.167535078706122 0.8082123888051269 0.21568847620725337 0.0747402528357989 1.3658895099676336e-10 9.864584430341257 -0.12032439297649822 ADGATSDDLDLHDDRLS(ph)YLSAPGSEYSMYSTDSR ddPTM_A549_PD325901_60min_R1 2 ADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSR 34 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ADGATSDDLDLHDDRLS(0.99)Y(0.002)LS(0.008)APGSEYSMYSTDSR;ADGAT(0.001)S(0.001)DDLDLHDDRLS(0.943)Y(0.01)LS(0.046)APGSEYSMYSTDSR 98.625 4.4469e-10 16622100.0 3198.1000000000004 4181.6 3536.3 4575.0 4578.1 3670.2 3057.8 3836.6 5463.2 4724.1 4222.7 True False 3522.768757683216 4533.998107326475 3776.2945834993943 4857.587359421136 4256.550049587598 3640.311108050932 3174.166252292363 3760.0760032455228 5233.600702789758 4425.819519780049 3703.334669900773 0.951242345531144 1.2243014773082765 1.0197011396759819 1.3116792816219578 1.1493830369107978 0.9829819426361676 0.8571102898397814 1.0153216866425605 1.4132130010626305 1.1950903480993345 1.0 11.854609216237261 ADGATSDDLDLHDDRLSYLSAPGSEYSMYS(ph)TDSR ddPTM_A549_MK2206_60min_R1 2 ADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSR 34 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ADGATSDDLDLHDDRLS(0.001)YLS(0.001)APGS(0.013)EY(0.01)S(0.064)MY(0.002)S(0.335)T(0.302)DS(0.273)R;ADGATSDDLDLHDDRLSYLSAPGS(0.006)EY(0.003)S(0.028)MY(0.003)S(0.337)T(0.337)DS(0.287)R 71.878 4.9028999999999994e-05 4448500.0 1593.46 2098.42 1693.28 1909.1599999999999 3062.7 1914.49 1608.04 1945.4700000000003 2662.8 2959.3 3243.8999999999996 True False 1862.397091643354 2205.220614923504 1933.4125656605388 2376.90428570545 2612.180887134156 2117.0800610643896 1900.2000531930937 2221.246330251998 2059.680051617828 2290.79207467689 2438.350102914551 0.763793964376665 0.9043904779250576 0.7929183603903057 0.9748002482762197 1.0712903302982724 0.8682428575510348 0.7792974646757214 0.9109628381900329 0.8447023457197144 0.9394844784342965 1.0 11.251689570372417 -10.871982585137115 1.0755910678200813 1.0011972290240816 0.8806119432529979 0.12821282789529875 0.08679744059401756 0.692568110661312 1.3991145664040006 0.06377784628772623 0.01479762215436999 1.3428188060230908e-11 10.871982585137115 -0.12058528577108374 ADGATSDDLDLHDDRLSYLSAPGSEYSMYST(ph)DSR ddPTM_A549_PD325901_60min_R1 1 ADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSR 34 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ADGATSDDLDLHDDRLSYLSAPGS(0.007)EY(0.003)S(0.072)MY(0.003)S(0.188)T(0.652)DS(0.075)R 110.78 1.4348e-14 20949000.0 1040.0 984.41 809.45 913.38 868.43 841.75 590.11 1367.9 988.4 880.58 966.32 True False 1145.580034392465 1067.3696854871953 864.3841446182698 969.7974081635139 807.4344727208579 834.8950670813227 612.5669589705824 1340.6161614032092 946.860985253588 824.9800285192766 847.4687660071792 1.3517666731127178 1.2594796744145178 1.0199598844105924 1.1443459004780578 0.9527601548373972 0.9851632302803359 0.7228195109262506 1.5819062780560957 1.1172812771787353 0.9734636385552503 1.0 9.727016387573066 -5.6329994400815195 3.9844484696520017 1.062017272346905 1.3338727098073269 0.19743254563405233 0.19717495352673803 0.2516187197161074 7.11281169626419 0.02572671123601272 0.115809392301273 2.3280942591817528e-06 5.6329994400815195 0.27185543746042184 ADGGTGDSS(ph)PSPGSSLPSPLSDPR ddPTM_A549_PD325901_60min_R1 1 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDS(0.094)S(0.81)PS(0.094)PGS(0.001)SLPSPLSDPR 139.9 9.8148e-24 6250500.0 1636.6 1556.6 1451.4 1962.7 2069.0 1983.9 1415.0 1805.7 1682.2 1902.7 2775.9 True False 1802.7464271987574 1687.780144888174 1549.9007319772145 2083.931521384888 1923.6805776625106 1967.7437761599476 1468.8485993177098 1769.6838969557539 1611.502984008078 1782.5631972831868 2434.481897879923 0.7405051681709711 0.6932810411767625 0.6366450016847326 0.8560061683759846 0.7901806866330592 0.8082803071460766 0.6033516209739993 0.7269242373487719 0.6619490518337643 0.7322146033764055 1.0 11.249399057835996 -10.802153673633859 0.9805257976054021 1.0047513637495529 0.7221721124637822 0.024374436735437155 0.10529841476524189 0.2778495098834702 0.46120621342774165 0.05615637123146576 0.013104420999079857 1.5770531360389216e-11 10.802153673633859 -0.28257925128577066 ADGGTGDSSPSPGS(ph)SLPSPLSDPR ddPTM_A549_MK2206_60min_R1 1 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDS(0.003)S(0.002)PS(0.027)PGS(0.345)S(0.345)LPS(0.239)PLS(0.039)DPR 58.751999999999995 0.0014407 2834900.0 696.01 587.77 653.57 592.91 771.27 777.03 669.45 808.8 1051.5 936.86 796.28 True False 813.4794721892547 617.6849824313473 746.256053658437 738.1729766167415 657.8172046951911 859.2547988492307 791.0803994988415 923.4498768461184 813.3369289004603 725.2226753224722 598.5416997900055 1.3591024192210146 1.0319832062629188 1.2467904139682435 1.2332857959198578 1.0990332084230423 1.435580510348226 1.3216796754117333 1.542832984184903 1.3588642682469982 1.2116493730961635 1.0 9.225307951537575 -10.780635358523801 1.1030785029104258 1.0048266536302224 1.2907741224402332 0.1418995564091975 0.1485601763205831 0.4275537320781399 0.9474826620558349 0.09024082630385653 0.024373236578736752 1.6571607615679297e-11 10.780635358523801 0.28594746881001076 ADGGTGDSSPSPGSSLPS(ph)PLSDPR ddPTM_A549_MK2206_60min_R1 1 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDSSPSPGSSLPS(0.985)PLS(0.014)DPR 113.53 9.9109e-20 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ADGGTGDSSPSPGSSLPS(ph)PLSDPR ddPTM_A549_PD325901_60min_R1 2 ADGGTGDSSPSPGSSLPSPLSDPR 24 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 ADGGTGDS(0.001)S(0.001)PS(0.01)PGS(0.088)S(0.088)LPS(0.732)PLS(0.081)DPR;ADGGTGDSSPSPGSS(0.002)LPS(0.978)PLS(0.019)DPR 112.74 9.6284e-12 7099100.0 2988.3 3564.1 3439.5 2860.1000000000004 4027.3 3328.2 3448.9 4101.4 3674.6000000000004 3422.1 4953.8 True False 3291.6700161298113 3864.4592152100367 3672.925153393708 3036.761881241616 3744.436341430755 3301.096242661194 3580.1497768104946 4019.594359513943 3520.1693407657162 3206.02802198076 4344.514004725519 0.7576612740917554 0.8895032242977402 0.8454168059761518 0.6989877067811351 0.8618769181910656 0.7598309590141955 0.8240622018749101 0.9252115093061821 0.8102561844516637 0.737948598737067 1.0 12.084979084903765 -11.465310811088317 0.37977137962475893 1.1224818020588574 0.8080437328611461 0.0 0.09906972621033244 2.2914188881362074 0.2768596802465623 0.31252929637535753 0.017635110718560186 3.425225660335462e-12 11.465310811088317 -0.31443806919771133 ADGIVSK ddPTM_A549_MK2206_60min_R1 2 ADGIVSK 7 0 Q8WVC2;P63220 Q8WVC2 RPS21 40S ribosomal protein S21 0 ; 96.25299999999999 0.032663 9425700.0 5838.9 6647.0 5076.8 6607.1 7158.8 5799.9 5350.700000000001 5094.3 9883.7 8610.8 8932.0 False True 6824.363572600739 6985.303908367501 5796.766579269476 8225.839796603987 6105.750003205015 6413.6415683379655 6322.852929417362 5816.432625639441 7645.05773102566 6665.614299539674 6713.937889340845 1.0164472303854952 1.0404183094183046 0.8633929408957619 1.22518854540842 0.909414132784666 0.9552726989804844 0.9417502862896043 0.8663220782655291 1.1386846076075676 0.9928024967466723 1.0 12.712943475383218 -8.779064790125835 24.99948371026955 1.0654899396384674 0.9796684906719281 0.06741040626135009 0.10161838018162463 368.5118126992982 522686.8553637264 0.017581288521934014 0.01873664517885551 1.6631645130329503e-09 8.779064790125835 -0.08582144896653932 ADGIVSK ddPTM_A549_PD325901_60min_R1 2 ADGIVSK 7 0 Q8WVC2;P63220 Q8WVC2 RPS21 40S ribosomal protein S21 0 ; 95.531 0.032916 14074000.0 6782.700000000001 8045.099999999999 6076.700000000001 8522.1 8115.9 7412.299999999999 6880.9 7027.299999999999 9277.400000000001 7908.1 8499.9 False True 7471.274710840165 8723.088811280903 6489.10140416559 9048.49076190663 7545.867182335027 7351.936686340231 7142.756414872957 6887.134988689794 8887.503141027557 7408.781216395216 7454.466185305511 1.002254826182965 1.1701828936424907 0.8704984693548037 1.2138348390047449 1.0122612397396997 0.9862458965650163 0.9581848300489971 0.9238937862869298 1.192238708996614 0.9938714633919259 1.0 12.863889329406026 -8.759164525348389 24.999999187050978 1.09077938483141 1.0207759619332666 0.014268733503635889 0.10660684649031252 123.71051270620117 1359535.1391895162 0.018820538646420186 0.020843451894117196 1.7411471433696416e-09 8.759164525348389 -0.07000342289814343 ADGYEPPVQES(ph)V ddPTM_A549_MK2206_60min_R1 2 ADGYEPPVQESV 12 0 D6RAT0;P61247;H0Y9Y4;D6R9B6 D6RAT0 RPS3A 40S ribosomal protein S3a 1 ADGYEPPVQES(1)V;ADGYEPPVQES(1)V 138.89 1.193e-08 49015000.0 1446.06 1336.4699999999998 1100.38 1475.67 1907.4299999999998 1402.82 1381.15 1452.5900000000001 1812.7 2159.29 1994.3899999999999 True False 1690.119575227359 1404.4906144750885 1256.4304302900534 1837.2092162453441 1626.8495737572412 1551.2654812834478 1632.087077104825 1658.4990808703049 1402.1263442870802 1671.5048893079645 1499.1279206361946 1.1274018394041465 0.9368717606694001 0.8381075510599882 1.2255186438430656 1.0851973012862335 1.0347785935606664 1.0886910013737892 1.1063092468896696 0.9352946636415462 1.1149848297126086 1.0 10.5499077784171 -8.770515965373582 24.998361679404574 0.9694447020098648 1.0512597573617817 0.0 0.1060955740527187 301.82816718808414 831280.6912081313 0.017037328696293992 0.01826119425681226 1.6962272450334775e-09 8.770515965373582 0.08181505535191691 ADGYEPPVQES(ph)V ddPTM_A549_PD325901_60min_R1 3 ADGYEPPVQESV 12 0 D6RAT0;P61247;H0Y9Y4;D6R9B6 D6RAT0 RPS3A 40S ribosomal protein S3a 1 ADGYEPPVQES(1)V;ADGYEPPVQES(1)V;ADGYEPPVQES(1)V 145.14 7.8556e-12 72156000.0 2342.8 2390.3 1880.61 2183.73 2689.3 2545.8 2427.7 2491.2 2674.2 2241.44 2703.3999999999996 True False 2580.639331321794 2591.7389697585786 2008.239503626616 2318.6140424893374 2500.4128455813407 2525.0678488573 2520.0874519884132 2441.5110616914058 2561.812673781004 2099.915095873456 2370.8989382645586 1.0884645016589194 1.0931461176728476 0.8470371601315909 0.9779472271333959 1.0546264985092884 1.0650255091453156 1.0629248726363076 1.0297828483058555 1.0805237762079347 0.8857041782685784 1.0 11.211218452597167 -6.767349790260717 24.906083690813208 1.043158470215283 0.9971405915593198 0.0 0.07959358173369369 263.42846744105185 1110073.9690594918 0.00972980160701602 0.018735594190600707 1.708638585907078e-07 6.767349790260717 -0.046017878655963185 ADHGEPIGR ddPTM_A549_MK2206_60min_R1 2 ADHGEPIGR 9 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 74.376 0.0023190999999999997 48372000.0 455.55999999999995 734.91 581.8199999999999 546.45 722.06 461.21 468.83000000000004 592.99 940.48 967.67 729.5 False True 532.4473906273433 772.3137799455932 664.3308247617724 680.330274531073 615.8459305070978 510.01493607357935 554.0103423661837 677.0481484557114 727.46278163795 749.0726749239972 548.3450168242442 0.9710079863787722 1.4084449684953289 1.2115197628844396 1.2406974690336845 1.1230993473302393 0.9300986065804798 1.010331680544396 1.2347119563096516 1.3266515775981178 1.366060877624589 1.0 9.098940107478636 -11.153182373515609 1.5548682955170816 1.000521810081348 1.1862404845559658 0.0 0.1782387147136597 0.5783813564594428 2.518935845848488 0.10855145168752066 0.023415749056704762 7.027771403278047e-12 11.153182373515609 0.18571867447461776 ADHGEPIGR ddPTM_A549_PD325901_60min_R1 2 ADHGEPIGR 9 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 108.81 0.00046113 72829000.0 1589.19 1402.73 1647.17 1611.4099999999999 1856.81 1615.54 1591.06 1533.8 1751.01 1453.48 2116.52 False True 1750.523398900155 1520.942979981363 1758.9568614378582 1710.9431359223634 1726.394071246751 1602.3835778705798 1651.608658961439 1503.2071557571767 1677.4211390013004 1361.707024747551 1856.2014577257162 0.9430675703945186 0.8193846490374359 0.9476109686892469 0.9217443121818639 0.9300682660609427 0.863259519165488 0.8897787748669524 0.8098297463891443 0.9036848516736627 0.7335987260865331 1.0 10.8581375825679 -10.275655654059639 0.8983253880633331 0.9944206922261253 0.8915089127219469 0.0 0.08944047079887732 0.36539348733693605 0.5731097616215172 0.02120626665668088 0.008309181479504558 5.300835730657405e-11 10.275655654059639 -0.1029117795041784 ADHGVPLPGS(ph)PPPTVALPLPSR ddPTM_A549_MK2206_60min_R1 1 ADHGVPLPGSPPPTVALPLPSR 22 0 A0A1W2PRX0;V9GYJ6;V9GY36;Q9UK80-2;Q9UK80-3;Q9UK80 A0A1W2PRX0 USP21 Ubiquitin carboxyl-terminal hydrolase 21 1 ADHGVPLPGS(0.986)PPPT(0.01)VALPLPS(0.004)R 46.695 0.004466899999999999 5146900.0 784.96 741.82 855.56 648.15 1427.6 1007.4 654.25 862.32 1231.2 1140.4 1266.9 True False 917.4420575705492 779.5754694305971 976.8912729593039 806.9467790965591 1217.6019311302841 1114.0023993420007 773.1187562508286 984.5565007442436 952.3351658223933 882.7828479578025 952.2937653387734 0.9634023564610592 0.818629185452314 1.0258297476218172 0.8473716918743999 1.2785990788222044 1.169809611161006 0.8118490159134831 1.0338789736736258 1.0000434744877336 0.9270068544907014 1.0 9.895262877195842 ADHGVPLPGS(ph)PPPTVALPLPSR ddPTM_A549_PD325901_60min_R1 2 ADHGVPLPGSPPPTVALPLPSR 22 0 A0A1W2PRX0;V9GYJ6;V9GY36;Q9UK80-2;Q9UK80-3;Q9UK80 A0A1W2PRX0 USP21 Ubiquitin carboxyl-terminal hydrolase 21 1 ADHGVPLPGS(0.999)PPPT(0.001)VALPLPSR;ADHGVPLPGS(0.999)PPPT(0.001)VALPLPSR 60.419 0.00046367 10011500.0 1492.44 1764.04 1184.01 1055.1799999999998 2126.6 1880.24 1429.9299999999998 1634.1999999999998 1604.2 1666.48 1938.31 True False 1643.9514101237419 1912.7018416989183 1264.3640386305235 1120.3560721123479 1977.234952371723 1864.927948831585 1484.3467686377196 1601.6045989949014 1536.7810527557729 1561.2581683967448 1699.910157959449 0.9670813498150519 1.1251781941199186 0.7437828597649245 0.6590678141821386 1.1631408537173349 1.0970744189623651 0.8731913046625424 0.9421701444018945 0.9040366313243906 0.9184356956080901 1.0 10.731242785088922 -6.773792874529785 24.999976959582916 0.9694581491783333 0.8824493450524464 0.12536945449240133 0.13712455568928233 476.01094770576697 963312.1643454237 0.020444694237886068 0.03883252990217138 1.683476760146206e-07 6.773792874529785 -0.08700880412588685 ADIDLTKR ddPTM_A549_PD325901_60min_R1 2 ADIDLTKR 8 1 P62269 P62269 RPS18 40S ribosomal protein S18 0 ; 71.223 0.0062909 3913000.0 1707.6799999999998 1985.54 1886.88 2117.8 2337.9 2898.1000000000004 2344.4 2229.2599999999998 2262.8 2169.3999999999996 2697.2 False True 1881.042416472428 2152.8684240532352 2014.935023531189 2248.6116961272296 2173.693969317151 2874.4988344619937 2433.6174249049036 2184.795660479361 2167.702385098965 2032.423713767879 2365.4614989595193 0.7952115971026501 0.9101261741102968 0.8518147619048062 0.9506016889796398 0.9189301835068042 1.2151957813417726 1.0288129508661898 0.9236234288490314 0.9163972383623485 0.8592081142144433 1.0 11.207905963916991 -6.378694663952491 2.0210497635917157 0.9791350920233282 0.853090734111482 0.2769457411486901 0.09052923379449036 0.3570667357980968 2.8137584113748604 0.012899702892087398 0.03814984405424674 4.1812423068677085e-07 6.378694663952491 -0.1260443579118462 ADIDVSGPKVDIDT(ph)PDIDIHGPEGK ddPTM_A549_PD325901_60min_R1 2 ADIDVSGPKVDIDTPDIDIHGPEGK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ADIDVSGPKVDIDT(1)PDIDIHGPEGK;ADIDVSGPKVDIDT(1)PDIDIHGPEGK 193.11 4.0237e-58 62745000.0 3697.3999999999996 3966.7 5079.5 5083.0 5260.9 5797.299999999999 5064.2 5173.7 4552.3 4360.7 4421.3 True False 4072.757326117979 4300.9877301348615 5424.225415514856 5396.965365669424 4891.3925331197215 5750.08871088869 5256.920902236572 5070.506494810869 4360.982662049685 4085.364657798282 3877.508128929901 1.0503542973208317 1.1092143683840143 1.3988946599608578 1.3918643588140862 1.2614783439460198 1.4829340183680224 1.355747229261736 1.3076714029250036 1.1246869167114322 1.0536056977721269 1.0 11.920914090437847 -8.9900316081111 1.8252064941960726 1.043858559098699 1.3035111157981258 0.430260239646454 0.12117671713314067 0.21827382801521147 1.4626818641315713 0.02575733238886232 0.02560761788974799 1.0232185193529451e-09 8.9900316081111 0.2596525566994268 ADIEMPFDPSK ddPTM_A549_MK2206_60min_R1 1 ADIEMPFDPSK 11 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 65.347 0.0049148 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ADIKGPEDK ddPTM_A549_PD325901_60min_R1 1 ADIKGPEDK 9 1 P36542-2;P36542 P36542-2 ATP5C1 ATP synthase subunit gamma, mitochondrial 0 73.499 0.0022515 2004200.0 2965.6 2935.2 2464.3 3094.4 3162.2 3159.4 2787.4 2944.2 3632.3 2700.7 2903.7 False True 3266.665528840668 3182.559605085294 2631.5422170397205 3285.534060107708 2940.097980997773 3133.670893895731 2893.4760323238056 2885.475621319782 3479.6470626635037 2530.1773410956544 2546.563308070872 1.282774128759164 1.249746902030178 1.0333700358830755 1.2901835386125298 1.1545355937862074 1.2305489849650026 1.13622780284058 1.1330861526885228 1.3664090154897746 0.9935654586228878 1.0 11.31433586802932 -11.09656696689348 1.4416497723668455 1.0004175807772169 1.2231291562724196 0.45169483044069636 0.08852093807865286 0.3232158841680566 1.2042697367789044 0.06851087387894796 0.015083385768074237 8.006321639337294e-12 11.09656696689348 0.2227115754952027 ADIPVKS(ph)SPQAAVPYK ddPTM_A549_MK2206_60min_R1 1 ADIPVKSSPQAAVPYK 16 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 ADIPVKS(0.629)S(0.371)PQAAVPYK 153.86 1.0161e-16 6649400.0 3942.5 3536.0 4254.7 3428.1 5229.3 4162.8 4233.2 4133.4 5833.7 6131.1 5757.5 True False 4607.897615129292 3715.967296522864 4858.080437444424 4267.984653893256 4460.076897211825 4603.304732956998 5002.317644571657 4719.322108006607 4512.376264504626 4746.080251766123 4327.753851083738 1.0647319079793325 0.8586364715711194 1.1225408386449438 0.9861893260922142 1.0305754556939395 1.0636706456408693 1.1558692607526646 1.090478402976827 1.0426601003138514 1.0966613201852111 1.0 12.079402730240954 -5.771001513564811 24.999993465421277 1.0407106043880425 0.9616841641994376 0.18877032542559136 0.06879900047886825 223.91706654360064 585432.1525793702 0.00906951921455191 0.028715693303451605 1.694331895501005e-06 5.771001513564811 -0.07902644018860494 ADIPVKS(ph)SPQAAVPYK ddPTM_A549_PD325901_60min_R1 1 ADIPVKSSPQAAVPYK 16 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 ADIPVKS(0.578)S(0.422)PQAAVPYK 87.85 3.6113e-06 13067000.0 4418.0 4765.1 4891.9 4246.5 6027.7 5535.3 4813.2 5421.5 5166.6 5417.0 6037.5 True False 4866.5121076403 5166.671700119901 5223.893751384412 4508.796660498764 5604.335146436115 5490.2223520228645 4996.368959884098 5313.363929415527 4949.465769335478 5074.969695529 5294.925774865821 0.9190897690654828 0.9757779277370191 0.9865848877771646 0.8515316082241062 1.0584350725064007 1.0368837232967618 0.9436145419830199 1.0034822309761602 0.9347564025977122 0.9584590816398375 1.0 12.370394745086772 -6.770140833060197 24.999779068951945 0.9795546522717583 0.9400939500969631 0.22086299692568923 0.04858181054890135 313.6799290351305 901222.555084812 0.0072783626841322864 0.013907336445481358 1.6976930351137404e-07 6.770140833060197 -0.03946070217479525 ADIPVKS(ph)SPQAAVPYKK ddPTM_A549_MK2206_60min_R1 2 ADIPVKSSPQAAVPYKK 17 2 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 ADIPVKS(0.587)S(0.413)PQAAVPYKK;ADIPVKS(0.704)S(0.296)PQAAVPYKK 122.22 1.3437000000000002e-10 45593000.0 6773.9 8345.9 8534.3 7519.5 11231.0 9045.7 9781.0 8527.8 13540.7 10814.3 12374.8 True False 7917.168714045486 8770.670661778895 9744.592069307333 9361.777837563179 9578.934777615732 10002.909969950302 11558.081092685286 9736.641765292194 10473.75307005465 8371.34211914246 9301.795632894657 0.8511441259843844 0.9429008126949701 1.0476033288504836 1.006448454366854 1.0297941554145746 1.0753740852547051 1.2425645056973251 1.0467486224766922 1.125992602225694 0.8999705486474288 1.0 13.183293527830536 -5.055380478493846 0.8309044699436121 1.0723864981708888 0.648866295805528 0.37115545828340213 0.08095570208271242 2.0345657064996865 0.8113295272451464 0.01104687421496232 0.8538604287617055 8.802773381059629e-06 5.055380478493846 -0.4235202023653608 ADIPVKSS(ph)PQAAVPYKK ddPTM_A549_PD325901_60min_R1 2 ADIPVKSSPQAAVPYKK 17 2 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 ADIPVKS(0.039)S(0.961)PQAAVPYKK;ADIPVKS(0.029)S(0.971)PQAAVPYKK 161.04 4.8351000000000007e-23 93617000.0 11656.7 10046.6 11725.8 11354.2 13365.6 14281.2 13148.0 13682.0 15365.7 12931.0 12661.8 True False 12840.079602791015 10893.262240545762 12521.583300963503 12055.523146740858 12426.846364816853 14164.898642116776 13648.354334861671 13409.10177667864 14719.933064661127 12114.53445318174 11104.478869763327 1.1562973601357918 0.9809791497921896 1.1276155727630628 1.0856451066395518 1.1190841560925686 1.27560228699131 1.2290855334080673 1.2075399425713378 1.3255852199190017 1.090959296268168 1.0 13.438854068728853 -7.0106209962809425 21.685038021368086 1.1765705745607697 1.085308351933519 0.20815488467219012 0.09142809547438371 166.73324060960584 340429.58326240856 0.018552357323304985 0.0335180886708643 9.758408711569064e-08 7.0106209962809425 -0.09126222262725081 ADIS(ph)IIK ddPTM_A549_MK2206_60min_R1 2 ADISIIK 7 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 ADIS(1)IIK;ADIS(1)IIK 80.23899999999999 0.015958 3496500.0 1195.09 1266.6399999999999 1128.28 1444.12 2123.02 1252.98 1456.0 1351.37 2346.16 1801.95 2194.26 True False 1396.7919748547527 1331.106565743134 1288.2870698192098 1797.9294648290092 1810.7265703475873 1385.5695119391896 1720.5363532307313 1542.9308358970543 1814.75850604765 1394.8882434913728 1649.3646835048194 0.8468666686172993 0.8070419956577448 0.781080789896424 1.0900739435068398 1.0978327524873892 0.8400625560836686 1.0431509601470765 0.935469791082468 1.100277291127258 0.8457124476118304 1.0 10.687694706430086 -6.256848229394277 24.973505593920624 1.0310942383930664 0.811201023471613 0.39090302955347767 0.0934350858800509 191.87366042950532 1043689.0123460301 0.010825457959459009 0.02761216352391823 5.535435193576685e-07 6.256848229394277 -0.2198932149214533 ADIS(ph)IIK ddPTM_A549_PD325901_60min_R1 2 ADISIIK 7 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 ADIS(1)IIK;ADIS(1)IIK 93.551 0.012135 6090000.0 1982.07 2273.8999999999996 2723.5 2241.55 2841.0 2538.8 2584.1 2965.2 2023.4299999999998 2582.9 2940.0 True False 2183.2882872771856 2465.5295332527426 2908.3330877359417 2380.005452570589 2641.4579609179286 2518.124854536456 2682.4393395737793 2906.0567598456014 1938.392273767369 2419.815253199529 2578.398638195532 0.8467613405214717 0.9562251145843842 1.1279609927855498 0.9230556583896637 1.0244567778574876 0.9766235589927018 1.040350898358781 1.1270781471864948 0.7517814526631672 0.9384953968533795 1.0 11.332259616200002 -8.759198360663952 24.999999577639556 0.8827856917335082 1.0038736703239264 0.19231778924134268 0.0956152284327469 72.48061727617322 808567.44536953 0.019408743004081592 0.02149478516751663 1.7410114981550175e-09 8.759198360663952 0.1210879785904182 ADITGR ddPTM_A549_MK2206_60min_R1 2 ADITGR 6 0 O95994;B5MC07;H7C3Z9 O95994 AGR2 Anterior gradient protein 2 homolog 0 ; 121.14 0.046498000000000005 26489000.0 7817.400000000001 8447.1 7667.700000000001 7210.4 11185.0 8153.5 8223.8 7762.200000000001 11592.5 11952.6 11767.5 False True 9136.786002919902 8877.021309518746 8755.095158340793 8976.948323687151 9539.701316679908 9016.297958144727 9717.958009408576 8862.515620740527 8966.817259418534 9252.499358558776 8845.30498352199 1.0329531904146794 1.0035856678832262 0.9898013889459719 1.0148828491963138 1.0785045099577137 1.0193314956286168 1.098657200346654 1.001945737004049 1.0137374885459474 1.0460350859348946 1.0 13.110696172137361 ADITGR ddPTM_A549_PD325901_60min_R1 2 ADITGR 6 0 O95994;B5MC07;H7C3Z9 O95994 AGR2 Anterior gradient protein 2 homolog 0 ; 127.95 0.036680000000000004 49895000.0 13047.0 11923.1 13663.3 14296.0 15415.2 12668.3 13238.900000000001 14844.400000000001 14982.400000000001 15053.3 16482.3 False True 14371.52183530625 12927.90148112309 14590.573702097481 15179.031451428313 14332.489531553003 12565.133564961481 13742.713584104054 14548.31679679349 14352.741830699466 14102.832068987756 14455.081589908232 0.9942193508848598 0.8943499488891617 1.009373320471871 1.0500827239899846 0.9915191029816935 0.8692537283036706 0.9507185067497983 1.0064499952010197 0.9929201534718273 0.9756314401458379 1.0 13.819289131499922 -8.267344560569635 24.19686149080143 0.9972978187199907 0.9651203413809241 0.07078963637725844 0.04834206629938195 611.3751420382748 2505146.927320752 0.008063847798955014 0.009881580462926923 5.403254694083421e-09 8.267344560569635 -0.03217747733906662 ADKDYHFK ddPTM_A549_MK2206_60min_R1 1 ADKDYHFK 8 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 58.676 0.050307 22716000.0 3564.5 3561.2 3228.8 3233.6 4482.7 3594.2 3689.6 4497.3 5063.3 4276.7 4353.8 False True 4166.100456342006 3742.449868884962 3686.6923911017325 4025.832145161822 3823.30076819678 3974.535858363132 4359.952561044029 5134.806047403617 3916.4706344286246 3310.590499702853 3272.631301232893 1.2730124700489536 1.1435598832887393 1.1265223765698418 1.230151451416228 1.1682650492148121 1.2144771263618397 1.3322467946210474 1.5690145252443166 1.1967344543068996 1.0115989841127717 1.0 11.676235360358193 -10.035969211741799 1.1092520729156525 1.0267082021201779 1.2462006859110986 0.38764958706245056 0.1167411848487676 0.367593186373936 0.909698538429961 0.0432040269632683 0.023609655974357532 9.205148271151313e-11 10.035969211741799 0.21949248379092068 ADKDYHFK ddPTM_A549_PD325901_60min_R1 2 ADKDYHFK 8 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 58.676 0.050307 68606000.0 10082.4 11336.7 9685.4 10445.1 11736.900000000001 9222.4 10401.7 11589.9 10862.3 10767.7 11692.099999999999 False True 11105.957825729407 12292.083495152117 10342.709487041555 11090.270104456757 10912.540634106885 9147.295832076972 10797.542385528643 11358.730352399341 10405.79530566576 10087.825584372828 10254.04582232856 1.08308057308909 1.1987544924351377 1.0086467006535047 1.0815506675723339 1.06421804848428 0.8920669939038501 1.0530031338475783 1.1077315772926712 1.0147989862700595 0.9837897898219079 1.0 13.32390562939344 -6.080610429211396 1.194643013583566 1.0136490880617224 1.1390471245404201 0.27999969056096763 0.06379838059256623 0.5107318300667341 1.2068554928797677 0.009053715924545479 0.054577358839594046 8.30595494126389e-07 6.080610429211396 0.12539803647869774 ADKDYHFKVDNDENEHQLSLR ddPTM_A549_MK2206_60min_R1 2 ADKDYHFKVDNDENEHQLSLR 21 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 142.45 3.5437e-22 71060000.0 8044.2 8468.2 8938.9 7907.799999999999 11662.1 7466.2 7777.1 7340.799999999999 13542.3 13709.599999999999 13141.4 False True 9401.864298192273 8899.19520939336 10206.57043323194 9845.211354994635 9946.620538690458 8256.268328337543 9190.098401587038 8381.380880257148 10474.990672609316 10612.591838269274 9878.027695810992 0.951795701299699 0.900908104678353 1.0332599530532067 0.9966778448262225 1.006943981631936 0.8358215407554289 0.9303576265011196 0.8484872829230341 1.0604334180042319 1.0743634422861348 1.0 13.270007298382813 -8.790500805022686 24.999988127503173 1.0285380089758238 0.9405574476557078 0.3680939952404796 0.061297409926842364 192.06888113425174 165225.70418454413 0.010896826827914168 0.01160145772646968 1.6199409911243824e-09 8.790500805022686 -0.087980561320116 ADKDYHFKVDNDENEHQLSLR ddPTM_A549_PD325901_60min_R1 2 ADKDYHFKVDNDENEHQLSLR 21 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 238.87 1.1998999999999998e-86 75835000.0 3383.2 3825.0 4342.4 5436.299999999999 5140.9 8113.3 6378.0 6995.6 6711.299999999999 5830.200000000001 6231.1 False True 3726.6599734197976 4147.346173838668 4637.101376972477 5772.0879042669085 4779.8209191421965 8047.22797475604 6620.718280175521 6856.0672700579635 6429.247400174424 5462.080177011842 5464.71420219734 0.6819496565659962 0.7589319441757881 0.8485533196059762 1.0562469857885661 0.8746698806719388 1.472579841690583 1.2115397137353234 1.2546067399647665 1.17650203876888 0.9995179939722304 1.0 12.415930331363604 -6.179545499487926 1.2367979183724247 1.1280933424574244 0.6884287966994627 0.5799877406910721 0.1455636038719104 0.3258756203204049 0.8646990968492817 0.023096861151926582 0.11784033460245154 6.613852428751403e-07 6.179545499487926 -0.43966454575796177 ADLDVS(ph)GPKVDIDVPDVNIEGPEGK ddPTM_A549_PD325901_60min_R1 1 ADLDVSGPKVDIDVPDVNIEGPEGK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ADLDVS(1)GPKVDIDVPDVNIEGPEGK 82.15700000000001 7.198000000000001e-07 5117300.0 1155.8 1090.6 1009.0 1484.1 1037.6 1184.1 1467.6 1456.4 1452.4 1038.5 985.48 True False 1273.1359651450105 1182.5086894610329 1077.4768076099008 1575.7694863643499 964.7225555256757 1174.4570821871032 1523.450321101534 1427.350959476302 1391.360678857053 972.9289327684808 864.2722074724261 1.4730728977949101 1.3682132541543746 1.2466868635762267 1.823232857357181 1.1162253595392333 1.358897199323135 1.7626973399467303 1.6515062582546836 1.609863960483125 1.125720489860275 1.0 9.755341958784493 -10.799972428989589 1.057359414959144 1.0012089101394244 1.492739675968481 0.38448725067288125 0.20670577024831305 0.3884177409324305 0.7739379769791249 0.14024237025402242 0.035410007738027334 1.5849938119614903e-11 10.799972428989589 0.49153076582905664 ADLDVSGPK ddPTM_A549_MK2206_60min_R1 2 ADLDVSGPK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 108.98 0.0011689 5038900.0 4234.9 4491.5 4252.799999999999 4084.2000000000003 5721.5 4376.8 3924.2000000000003 3684.5 6954.9 6370.5 6892.1 False True 4949.647586635646 4720.09816525239 4855.910988874336 5084.829183346704 4879.874929225222 4839.950070915297 4637.176344332445 4206.789158308012 5379.626254693118 4931.399625495599 5180.601357716758 0.9554195053558608 0.9111100892218958 0.9373257376078976 0.9815133094100366 0.9419514439103506 0.9342448369832502 0.8951038738823526 0.8120271890910492 1.0384173348292671 0.9518971418540126 1.0 12.338903858527635 -8.830776094202198 24.999999999999684 1.0181416944438069 0.9235736154914814 0.3199225268494178 0.04626914298649895 29.126060987721026 10501.229157222593 0.007560037092654517 0.008048179945099064 1.476467547870589e-09 8.830776094202198 -0.09456807895232544 ADLDVSGPK ddPTM_A549_PD325901_60min_R1 2 ADLDVSGPK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 122.13 0.00032504 7513400.0 6209.1 6125.8 6205.8 5516.799999999999 7289.4 7143.4 6540.1 6842.700000000001 7629.7 7068.2 8251.6 False True 6839.443261102165 6642.042664496969 6626.962906506958 5857.560206438143 6777.417691064818 7085.226518786723 6788.987084380038 6706.2169805056965 7309.050241996454 6621.912645733441 7236.705511202129 0.9451045438445688 0.9178268556341493 0.9157430679262387 0.8094235971563131 0.9365335760276066 0.9790679623233359 0.9381322860065204 0.926694746680619 1.0099969151269648 0.9150452005381436 1.0 12.821117348770517 -8.185706011660166 0.7947584550024306 1.0060586294695442 0.9048625600131578 0.10744988453917881 0.048342292065679124 0.34476649065877907 0.4366479090119572 0.008947968843391284 0.012635761611107937 6.520696522688333e-09 8.185706011660166 -0.10119606945638637 ADLES(ph)PQR ddPTM_A549_MK2206_60min_R1 2 ADLESPQR 8 0 A0A087X1K6;Q9Y2Y9 A0A087X1K6 KLF13 Krueppel-like factor 13 1 ADLES(1)PQR;ADLES(1)PQR 70.55199999999999 0.006543300000000001 17466400.0 1381.77 1514.4 1351.47 1416.69 2080.95 1805.2 1572.58 1331.28 2510.5 1863.31 2045.14 True False 1614.9789949669498 1591.4764914746122 1543.1287679020875 1763.7791135976302 1774.8450116177962 1996.2250658052214 1858.2974301947695 1519.9930168740098 1941.8757584447035 1442.3869768750026 1537.2752950074505 1.0505463791761012 1.0352579636472328 1.003807693334855 1.14734109064641 1.1545394747329198 1.2985475485674456 1.2088254044216349 0.9887578508614769 1.2631932385508686 0.9382749996434516 1.0 10.586159830417921 -6.267643405085611 23.718072228932538 1.1389675504117622 1.0304094068730938 0.12297488112779587 0.10845175447397691 347.514206504656 1328558.7697302098 0.015974955419855795 0.03805402827644564 5.399537912803744e-07 6.267643405085611 -0.10855814353866844 ADLES(ph)PQR ddPTM_A549_PD325901_60min_R1 2 ADLESPQR 8 0 A0A087X1K6;Q9Y2Y9 A0A087X1K6 KLF13 Krueppel-like factor 13 1 ADLES(1)PQR;ADLES(1)PQR 85.53299999999999 0.0029601 28570000.0 2714.6000000000004 2441.1 2712.6 2714.5 3226.4 2662.4 2649.2 2586.2 3062.3 2788.7 3488.8999999999996 True False 2990.184193617102 2646.820064041195 2896.693348188916 2882.1684999232048 2999.7887944757517 2640.7182971159054 2750.0167556978645 2534.616212165348 2933.6021804351085 2612.621006077481 3059.787417959316 0.9772522679406811 0.8650339721334158 0.946697581402837 0.941950569182165 0.9803912444598588 0.8630397921163743 0.8987607242113412 0.8283634991400076 0.9587601292875553 0.8538570329241806 1.0 11.579215708263192 -8.977071867024385 12.965963629759788 0.9818261194714297 0.9121072897718707 0.0 0.05993544459415931 0.7301224967099241 411.2985362349996 0.008131810898044564 0.008409712710090578 1.0542124309475965e-09 8.977071867024385 -0.069718829699559 ADLES(ph)PQRK ddPTM_A549_MK2206_60min_R1 4 ADLESPQRK 9 1 A0A087X1K6;Q9Y2Y9 A0A087X1K6 KLF13 Krueppel-like factor 13 1 ADLES(1)PQRK;ADLES(1)PQRK;ADLES(1)PQRK;ADLES(1)PQRK 93.959 0.00040225 72083800.0 10793.1 10218.899999999998 10208.900000000001 9478.0 13771.5 10949.5 11187.9 10981.300000000001 15698.0 14846.3 15054.4 True False 12614.711414039808 10738.99836154906 11656.675530078817 11800.110425483583 11745.730592995738 12108.168822310145 13220.59661147671 12537.932903820812 12142.42806455485 11492.510518796842 11315.97699969691 1.1147699765011614 0.9490120350930986 1.0301077432722807 1.0427831751336751 1.03797759515686 1.0700064892880616 1.1683124322213463 1.1079850112947942 1.0730340000585081 1.0156003780411236 1.0 13.466073529047637 -4.92534336555911 19.98947021633422 1.046274534113925 3.2430074801913404 0.10295903049390465 0.05466038142257583 642.0072607933482 180570.93325767436 0.0079485386367471 3172.5604586809595 1.1875629351658338e-05 4.92534336555911 2.1967329460774154 ADLES(ph)PQRK ddPTM_A549_PD325901_60min_R1 4 ADLESPQRK 9 1 A0A087X1K6;Q9Y2Y9 A0A087X1K6 KLF13 Krueppel-like factor 13 1 ADLES(1)PQRK;ADLES(1)PQRK;ADLES(1)PQRK;ADLES(1)PQRK 77.744 0.00090407 108159500.0 19243.8 20105.9 20044.2 19950.0 23320.699999999997 21472.3 20241.800000000003 20846.2 22594.300000000003 21140.8 21715.100000000002 True False 21197.4164094632 21800.294754662194 21404.519947566256 21182.266190262642 21682.734484047432 21297.43670791838 21012.11277573797 20430.406187472476 21644.740144794763 19805.966280088494 19044.280363360464 1.113059459586889 1.1447161215187769 1.123934301489632 1.1122639336383366 1.138543125303024 1.118311445828785 1.103329313307288 1.0727843634763325 1.1365480727976132 1.0399955210800955 1.0 14.217070152574006 -11.01683999734891 0.6021057296174135 0.9698375624249078 1.121382141728324 0.7394252870623808 0.021983533974398152 0.4248006486730133 0.1841142722933175 0.037247610365347836 0.004045664203250073 9.619666205786015e-12 11.01683999734891 0.15154457930341625 ADLINNLGTIAK ddPTM_A549_MK2206_60min_R1 2 ADLINNLGTIAK 12 0 P08238;Q58FF8;P07900;P07900-2;Q14568 P08238;P07900 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ; 195.25 5.9004999999999995e-24 45454000.0 10252.7 11225.8 10889.4 8608.4 11594.4 9176.5 9432.8 9907.5 15157.8 14197.599999999999 14583.6 False True 11983.105105551318 11797.145270731435 12433.68066268064 10717.458386445758 9888.879119008807 10147.551139132293 11146.61765985909 11311.918465446233 11724.582502032707 10990.352299338563 10962.089633115893 1.0931405878447655 1.0761766839684364 1.134243659632115 0.9776838855676644 0.9020979986457168 0.9256949613399509 1.0168332893562326 1.0319126046254472 1.0695572554536832 1.0025782188586827 1.0 13.420235215802132 -6.261800760845584 24.999986879531217 1.0123435296500436 1.0986859487304963 0.46223713932494914 0.049165172321063495 31.405500872044417 2172698.977871778 0.008394503927240298 0.02069567902627868 5.472669723034412e-07 6.261800760845584 0.0863424190804527 ADLINNLGTIAK ddPTM_A549_PD325901_60min_R1 2 ADLINNLGTIAK 12 0 P08238;Q58FF8;P07900;P07900-2;Q14568 P08238;P07900 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ; 247.3 3.6966999999999996e-51 68707000.0 25237.0 26387.0 26173.0 26164.0 32115.0 27387.0 27449.0 29718.0 28683.0 26874.0 31121.0 False True 27799.041661502542 28610.72509518455 27949.257171034624 27780.09085724471 29859.3531907354 27163.969352130902 28493.586715669124 29125.25117668 27477.553257819345 25177.171053654467 27293.31429227317 1.0185293498551968 1.0482686268440597 1.024033097326958 1.0178350111591008 1.0940171234238374 0.9952609295171276 1.0439767926512227 1.0671203528010322 1.0067503331978387 0.9224666079041273 1.0 14.736259974700145 -8.907004967458235 9.836143613231284 1.0029710058453531 1.0383412984720153 0.3209488326534795 0.03493127478001946 0.2784296782441696 27.176385522669655 0.004048611436926414 0.004304864681764071 1.2387824172618913e-09 8.907004967458235 0.035370292626662136 ADLLLSTQPGREEGSPLELER ddPTM_A549_MK2206_60min_R1 2 ADLLLSTQPGREEGSPLELER 21 1 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5GZI0 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ; 168.2 6.023e-35 13364500.0 3816.1 3805.1 3864.2000000000003 3229.3 4954.299999999999 3947.5 3509.8 3382.8999999999996 5904.5 4853.0 5205.1 False True 4460.164385312593 3998.763337103832 4412.201665539926 4020.478644968788 4225.529032921527 4365.221829861571 4147.4852284129265 3862.4364346967523 4567.140177548996 3756.70392944512 3912.5300165481467 1.139969371851005 1.0220402962254498 1.1277106237852246 1.0275904920765004 1.0799991348435776 1.1157030901740697 1.060051989600343 0.9871966268272646 1.1673112176091067 0.9601725516624905 1.0 11.933886104965245 -11.198078292816634 1.6343058667477768 1.0000246393265082 1.0905719627579413 0.30853749501752736 0.05451952003300283 0.4261728270334371 2.048853848334648 0.04083456121424307 0.008544485062869157 6.337554501412687e-12 11.198078292816634 0.09054732343143312 ADLLLSTQPGREEGSPLELER ddPTM_A549_PD325901_60min_R1 1 ADLLLSTQPGREEGSPLELER 21 1 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5GZI0 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 150.83 4.3382e-22 5187300.0 2933.5 3241.1 3002.6 3175.6 3895.3 2578.2 3297.0 3057.4 3529.8 3042.5 3502.1 False True 3231.3067604714383 3514.23887164144 3206.3744921005814 3371.7495996891253 3621.7075660554756 2557.203993999485 3422.469139187627 2996.4177585160987 3381.4547812101496 2850.3960307637017 3071.3639016410084 1.0520755156186388 1.1441948867614828 1.0439578619737757 1.097802053962939 1.1791854309808167 0.8325955750906588 1.1143157401045918 0.9755984163632103 1.1009619470371004 0.9280554574600408 1.0 11.584663740639218 ADLLQREEEEEEEEDQEGDRET(ph)TIR ddPTM_A549_MK2206_60min_R1 1 ADLLQREEEEEEEEDQEGDRETTIR 25 2 A0A0B4J2E5;Q15269 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog 1 ADLLQREEEEEEEEDQEGDRET(0.5)T(0.5)IR 51.566 0.0025634 4781200.0 786.27 807.57 630.08 677.42 1055.6 933.5 766.22 831.7 1319.9 1360.1 1199.2 True False 918.9731535441243 848.671863589641 719.434818441954 843.3879304105394 900.3226383448641 1032.2823503928507 905.4322558876726 949.5960219744264 1020.9447574471869 1052.852465369526 901.4055437637201 1.01948912995038 0.9414983848957759 0.7981255755739339 0.9356365026213014 0.9987986479267319 1.145191925581763 1.0044671481685583 1.0534614841722543 1.1326142428460602 1.1680119704760812 1.0 9.816032512621243 -6.895922623961768 3.39230072919859 1.063887452621488 0.9154665008425356 0.5135546693014245 0.0712927806890732 0.16205137006044873 3.6826137976978823 0.010507000437493573 0.020842054520170836 1.2708004970993708e-07 6.895922623961768 -0.14842095177895254 ADLLQREEEEEEEEDQEGDRET(ph)TIR ddPTM_A549_PD325901_60min_R1 2 ADLLQREEEEEEEEDQEGDRETTIR 25 2 A0A0B4J2E5;Q15269 A0A0B4J2E5 PWP2 Periodic tryptophan protein 2 homolog 1 ADLLQREEEEEEEEDQEGDRET(0.816)T(0.184)IR;ADLLQREEEEEEEEDQEGDRET(0.5)T(0.5)IR 95.87799999999999 3.7208000000000002e-09 14250800.0 2879.6 3074.0 2742.2 3871.7 3022.3 2932.3 3069.4 3097.0 3410.1 3290.5 4083.1000000000004 True False 3171.9348721505207 3333.0567682039386 2928.3021821881766 4110.846115731321 2810.0240743689765 2908.4203210009678 3186.2076966401264 3035.227905450499 3266.785355942187 3082.7372684397574 3580.904584903463 0.8857915079678206 0.9307862550305271 0.8177548752718639 1.1479909666015704 0.7847246436600409 0.8122026856740098 0.889777323325699 0.8476148507967926 0.9122793636318729 0.8608822702051595 1.0 11.806108362460282 -10.10963407443097 0.8621342615165084 0.9932695434065036 0.8921655230277302 0.0 0.10001996321048 0.7476302261864997 1.1066358827802034 0.03974878829240027 0.01746575070011566 7.769014384758186e-11 10.10963407443097 -0.10110402037877342 ADLNQGIGEPQS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 ADLNQGIGEPQSPSR 15 0 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(1)PSR;ADLNQGIGEPQS(0.997)PS(0.003)R 239.38 1.6075999999999998e-64 172573000.0 5998.8 7780.200000000001 6562.7 5866.9 9450.599999999999 7567.3 6977.8 7596.7 8889.0 8368.0 9260.8 True False 7011.250783421078 8176.178948078957 7493.389542580321 7304.290763375145 8060.42925913412 8368.066663232794 8245.575937893816 8673.555488918026 6875.655692816156 6477.662988171602 6961.08777492249 1.0072062025534718 1.1745547840287067 1.0764681878564242 1.049303068651002 1.157926680392113 1.2021205498053025 1.1845240578058405 1.2460057636630797 0.9877271936702041 0.9305532694915241 1.0 12.765097051205107 -8.792030864650757 24.982926786025313 0.9942044620612888 1.137974180922224 0.5231256550219996 0.0691254236357558 119.76994807436262 97811.1354574579 0.011606630362462237 0.012356926273622447 1.6142438308867845e-09 8.792030864650757 0.14376971886093515 ADLNQGIGEPQS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 ADLNQGIGEPQSPSR 15 0 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(0.999)PS(0.001)R;ADLNQGIGEPQS(1)PSR 335.1 5.182499999999998e-186 169299000.0 19952.4 19374.6 20813.0 18534.4 22489.0 19973.8 20050.4 20317.3 19394.7 22017.2 22917.0 True False 21977.952959819435 21007.365537164602 22225.495338736237 19679.22779332352 20909.4502228382 19811.139995092275 20813.42894399988 19912.05551288648 18579.60820588603 20627.03023452115 20098.35428283232 1.0935200290798257 1.045228143635061 1.1058365787551514 0.9791462284120044 1.040356336075671 0.9857095619025197 1.0355787668534815 0.9907306455382283 0.9244343066315844 1.0263044398685128 1.0 14.294789753331754 -6.68023578671482 0.5785337967626479 0.9670439931614343 1.093462587160374 0.3852639875131323 0.039085838112155914 0.7051110966619345 0.3637014550419708 0.008016113177729227 0.044498962465989986 2.0881621202066968e-07 6.68023578671482 0.12641859399893973 ADLNQGIGEPQS(ph)PSRR ddPTM_A549_MK2206_60min_R1 4 ADLNQGIGEPQSPSRR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(0.993)PS(0.007)RR;ADLNQGIGEPQS(0.999)PS(0.001)RR;ADLNQGIGEPQS(0.915)PS(0.085)RR;ADLNQGIGEPQS(0.912)PS(0.088)RR 164.57 6.6583e-21 651827000.0 7095.1 7748.3 7979.300000000001 6919.8 10410.3 8257.4 6526.799999999999 7520.2 9769.1 11255.8 10404.4 True False 8292.579421459439 8142.655374334869 9110.884723834886 8615.151310641624 8878.958660441018 9131.192587181493 7712.635075732369 8586.211379646606 7556.414448047062 8713.106962507398 7820.700333168145 1.0603371908126975 1.0411670345942408 1.164970441994175 1.1015830991636588 1.1353150334612265 1.167567122915509 0.9861821508519558 1.0978826721223256 0.9662068774071002 1.1141082756431022 1.0 12.933082089374867 -8.316304409135626 1.349624466021036 0.9850110060805944 1.1074022915872486 0.06877923225683902 0.06490415271705083 0.23627311073353707 0.835527773120995 0.009429225790220258 0.012021047208356813 4.8272033126546105e-09 8.316304409135626 0.12239128550665412 ADLNQGIGEPQS(ph)PSRR ddPTM_A549_PD325901_60min_R1 4 ADLNQGIGEPQSPSRR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(0.992)PS(0.008)RR;ADLNQGIGEPQS(0.968)PS(0.032)RR;ADLNQGIGEPQS(0.977)PS(0.023)RR;ADLNQGIGEPQS(0.958)PS(0.042)RR 224.61 6.3983e-55 909377000.0 21361.1 21167.8 20939.3 20398.4 25897.9 24364.0 22099.3 23824.7 24370.399999999998 23647.699999999997 24636.300000000003 True False 23529.663146789313 22951.684794400568 22360.366816239824 21658.36283987236 24078.92084690476 24165.587661858463 22940.30095470098 23349.49766838443 23346.196838348875 22154.580186258263 21606.19128237298 1.0890241060665589 1.0622735166250834 1.0349055288833866 1.002414657762562 1.1144454166963296 1.1184566194956127 1.0617466380303875 1.0806855018188095 1.0805327294031433 1.0253811001077582 1.0 14.399157157331567 -10.711727698780539 0.9051233547288892 0.9987712685712358 1.0711186760420852 0.32373028764583667 0.03215421788429065 0.5111662669919662 0.7244249805279506 0.02473430500432424 0.00602081604537256 1.9421031882739048e-11 10.711727698780539 0.07234740747084945 ADPGAVKDKAS(ph)PEPEKDFSEK ddPTM_A549_PD325901_60min_R1 1 ADPGAVKDKASPEPEKDFSEK 21 3 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ADPGAVKDKAS(1)PEPEKDFSEK 46.361999999999995 0.005218100000000001 3900100.0 1355.4 1549.0 1785.6 1546.2 2045.7 1751.5 1765.0 2198.6 1845.2 2011.0 2299.8 True False 1492.9992102072572 1679.539666215973 1906.7815536850726 1641.7052623250174 1902.0170892818744 1737.236364707974 1832.168040845059 2154.747198231667 1767.6526608558474 1884.025116800593 2016.939179633362 0.7402301592845519 0.8327170611665538 0.9453837641409129 0.8139587345531388 0.9430215390171666 0.8613231287538218 0.9083903269597398 1.0683253218489988 0.8764035518300409 0.9341011051920117 1.0 10.977951865110587 -2.3058663346454735 0.2429924670422422 0.9624307476792227 7.678541185597423e-28 0.4640959207941716 0.06356459838759425 29.821269198501472 0.410207541223618 0.03389669767816231 11.457947020229362 0.0049446284729449536 2.3058663346454735 -0.9624307476792227 ADPGEDDLGGT(ph)VDIVESEPENDHGVELLDQNSSIR ddPTM_A549_PD325901_60min_R1 1 ADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIR 35 0 P17010-2;P08048-2;P08048-3;P08048;P17010;P17010-3 P17010-2 ZFX;ZFY Zinc finger X-chromosomal protein;Zinc finger Y-chromosomal protein 1 ADPGEDDLGGT(0.556)VDIVES(0.439)EPENDHGVELLDQNS(0.002)S(0.002)IR 71.18 0.00010135 4546000.0 138.38 152.87 152.87 270.49 0.0 0.0 0.0 165.75 0.0 0.0 194.15 True False 152.42823573002815 165.75289139731169 163.24467748198762 287.19755297263873 0.0 0.0 0.0 162.44398622164044 0.0 0.0 170.27078081825255 0.8952107636878134 0.9734664432779969 0.958735707309849 1.686710729771035 0.0 0.0 0.0 0.9540332489285613 0.0 0.0 1.0 7.41168707349739 -6.768989417164151 24.999945798037622 0.4387718107463212 1.1053266714691992 0.4574311676270162 0.42255807720893435 164.14963349244616 543539.7071173972 0.07024713809216968 0.1345977323668921 1.7021999868947097e-07 6.768989417164151 0.666554860722878 ADPGEDDLGGTVDIVES(ph)EPENDHGVELLDQNSSIR ddPTM_A549_PD325901_60min_R1 1 ADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIR 35 0 P17010-2;P08048-2;P08048-3;P08048;P17010;P17010-3 P17010-2 ZFX;ZFY Zinc finger X-chromosomal protein;Zinc finger Y-chromosomal protein 1 ADPGEDDLGGT(0.002)VDIVES(0.979)EPENDHGVELLDQNS(0.01)S(0.01)IR 71.18 0.00025282 4795300.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 130.06 164.01 153.44 157.62 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 127.46585126990384 157.1172300601385 143.75177221376575 138.23373923550326 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.9221037640654818 1.136605512728439 1.039918134377177 1.0 7.110965972556338 -8.298706992471526 4.178116446068057 1.0623305153520815 1.689034942496783e-20 0.9947260824709607 0.03595538659120794 0.01406322090545588 0.5553311251448786 0.008408880349239024 0.010404789917476254 5.026816217474104e-09 8.298706992471526 -1.0623305153520815 ADPHLEFQQFPQS(ph)P ddPTM_A549_MK2206_60min_R1 2 ADPHLEFQQFPQSP 14 0 Q96NT5-2;Q96NT5 Q96NT5-2 SLC46A1 Proton-coupled folate transporter 1 ADPHLEFQQFPQS(1)P;ADPHLEFQQFPQS(1)P 126.1 3.5765000000000003e-07 17207000.0 2617.92 3289.2 3257.8 2525.1 4429.2 2906.1 2825.59 3344.0 4317.5 4177.2 4494.799999999999 True False 3059.7608940010846 3456.6062306908943 3719.805027171468 3143.749613356046 3777.67054732576 3213.6215730869444 3338.9631279706186 3818.022240570499 3339.593143630752 3233.567618808603 3378.617109830858 0.9056252290613255 1.0230831486151861 1.1009844875134993 0.9304841333481052 1.1181114712092604 0.9511647720412527 0.9882632507410037 1.1300547284452835 0.9884497221994889 0.9570683843989896 1.0 11.722217147431413 -5.257385078233123 23.47263420127833 1.0115249357275922 0.9056251282247902 0.18821787628030306 0.06600928243158917 208.01022221398662 1204167.9734272866 0.007984755226690909 0.0825024529004757 5.528596847425244e-06 5.257385078233123 -0.10589980750280192 ADPHLEFQQFPQS(ph)P ddPTM_A549_PD325901_60min_R1 2 ADPHLEFQQFPQSP 14 0 Q96NT5-2;Q96NT5 Q96NT5-2 SLC46A1 Proton-coupled folate transporter 1 ADPHLEFQQFPQS(1)P;ADPHLEFQQFPQS(1)P 163.33 2.1480000000000003e-19 33602000.0 7410.6 8431.7 6125.299999999999 8283.5 8782.3 7603.6 7866.4 7367.7 9346.3 7874.6 8333.5 True False 8162.918656604615 9142.268950053729 6540.99969242113 8795.152981806545 8165.4615452902235 7541.678802565549 8165.760156659247 7220.745443651166 8953.507513633751 7377.396412112353 7308.532330408999 1.116902585576686 1.2509035380489466 0.8949812899103757 1.203408917712806 1.1172505198226672 1.0319005870968765 1.1172913777344233 0.9879884383363028 1.2250759945851804 1.0094224228053048 1.0 12.835366003804213 ADPPYTHT(ph)IQK ddPTM_A549_MK2206_60min_R1 2 ADPPYTHTIQK 11 0 A0A2R8YE63;Q12929;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 ADPPYT(0.019)HT(0.981)IQK;ADPPYT(0.002)HT(0.998)IQK 126.95 3.7607e-07 60467000.0 2844.8 3698.4 3166.0 3660.0 4189.6 3121.0 3288.1 3347.8999999999996 6068.9 4845.0 5002.3 True False 3324.9326913176437 3886.6327628563786 3614.9864067852095 4556.700164303643 3573.315389929562 3451.2621484478714 3885.5052081442095 3822.4750775137477 4694.303840041848 3750.511135001363 3760.090853543408 0.8842692426392615 1.0336539499288218 0.9614093242929341 1.211859059205852 0.9503268748312734 0.9178666906932569 1.0333540756023527 1.0165911480334446 1.2484548972049607 0.9974522640768063 1.0 11.87655180623866 -8.55891864401347 24.858010027999484 1.118125811418325 1.0036884505108397 0.08199315336837598 0.10307798005174913 212.17216961786323 146341.77454931548 0.019509924461279183 0.022122219149857045 2.7610950411757927e-09 8.55891864401347 -0.11443736090748535 ADPPYTHT(ph)IQK ddPTM_A549_PD325901_60min_R1 2 ADPPYTHTIQK 11 0 A0A2R8YE63;Q12929;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 ADPPYT(0.02)HT(0.98)IQK;ADPPYT(0.016)HT(0.984)IQK 115.8 1.8111e-05 71946000.0 4067.2 4671.6 4064.9 5512.1 6349.6 4452.0 5824.7 5595.9 6260.0 5768.700000000001 7485.099999999999 True False 4480.099149885611 5065.292126981625 4340.768558229419 5852.569898112622 5903.626000930829 4415.7443880558985 6046.362145898143 5484.285384601374 5996.913969736397 5404.463297507498 6564.480151958285 0.6824758467049563 0.7716212113872521 0.6612509228068122 0.8915511605845453 0.899328791354436 0.6726723648846153 0.9210725001726787 0.8354485439285436 0.9135398128894373 0.8232888473118871 1.0 12.680465051776144 -2.768515493893695 0.08904924954277073 1.151254057299353 6.030037999327602e-08 0.2768397219975416 0.09278035861798997 52.746562896572456 0.3829071275725611 0.7485364837984974 7.453791360579192 0.0017040585242244222 2.768515493893695 -1.151253996998973 ADPSLLGFSVNAS(ph)SER ddPTM_A549_PD325901_60min_R1 1 ADPSLLGFSVNASSER 16 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;Q6Y7W6-4;Q6Y7W6-5 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ADPSLLGFS(0.037)VNAS(0.494)S(0.469)ER 55.885 0.011423 2886400.0 1273.1 1083.0 1409.1 1010.9 1144.9 1260.0 1234.7 1180.6 1129.4 1153.4 1393.8 True False 1402.344174793314 1174.26821078883 1504.7299996066504 1073.3409970795246 1064.4861736905796 1249.7389777516692 1281.687184153764 1157.0520068372166 1081.9352455942953 1080.5741271595248 1222.3714360261677 1.1472324478983438 0.9606476200117066 1.230992442443197 0.8780808888735742 0.8708369177466544 1.0223888917222013 1.048525142505315 0.9465633544241681 0.8851116884010156 0.8839981819866352 1.0 10.255467021118877 -6.2770412001902685 24.985213606689072 0.9485626839410302 1.0977265293696845 0.45134769917731854 0.08328345118354101 583.7012121784628 934755.4002481436 0.011552558074818883 0.026930623679355368 5.283951221669635e-07 6.2770412001902685 0.14916384542865435 ADQEQQDPLEYLQS(ph)DEEDDEKR ddPTM_A549_MK2206_60min_R1 4 ADQEQQDPLEYLQSDEEDDEKR 22 1 Q7RTV3 Q7RTV3 ZNF367 Zinc finger protein 367 1 ADQEQQDPLEY(0.477)LQS(0.523)DEEDDEKR;ADQEQQDPLEYLQS(1)DEEDDEKR;ADQEQQDPLEYLQS(1)DEEDDEKR;ADQEQQDPLEYLQS(1)DEEDDEKR 129.24 4.5893e-22 23129900.0 4112.66 4898.81 3785.1400000000003 3730.12 5999.58 4797.42 4568.72 4354.1 6105.28 6653.2 6293.87 True False 4806.776463116709 5148.138504490715 4321.929768723621 4643.999567451449 5117.049729595569 5305.079800130335 5398.797285530431 4971.307008872011 4722.4438281287685 5150.237499151925 4730.928377024816 1.0160323894270393 1.0881877919547525 0.9135479179335187 0.981625422613556 1.0816164020672783 1.1213612587951693 1.1411707925550172 1.0508100340336084 0.9982065784514407 1.088631466957613 1.0 12.207907604274448 -4.387639047884049 16.296452323767337 1.022486677352482 1.0332373044615843 0.0 0.06844143861959455 0.0 0.0 0.009202613231357449 0.0 4.096009470522557e-05 4.387639047884049 0.01075062710910224 ADQEQQDPLEYLQS(ph)DEEDDEKR ddPTM_A549_PD325901_60min_R1 3 ADQEQQDPLEYLQSDEEDDEKR 22 1 Q7RTV3 Q7RTV3 ZNF367 Zinc finger protein 367 1 ADQEQQDPLEY(0.034)LQS(0.966)DEEDDEKR;ADQEQQDPLEYLQS(1)DEEDDEKR;ADQEQQDPLEYLQS(1)DEEDDEKR 110.9 7.847199999999998e-11 35841000.0 7316.91 7515.48 8967.66 8302.009999999998 8836.08 7806.889999999999 7868.599999999999 7140.08 8800.52 8901.32 9398.380000000001 True False 8059.717316775553 8148.8358751793485 9576.259334520319 8814.80630246729 8215.46422362115 7743.31327620613 8168.043878863136 6997.665503115599 8430.664749032685 8339.289136091225 8242.438841239493 0.9778316190167251 0.9886437779080848 1.1618235232280167 1.0694415175231953 0.9967273499824614 0.9394444320853093 0.9909741565804364 0.8489799727847656 1.0228361910132033 1.0117501987842676 1.0 13.008855561824012 -6.808104611580755 7.7345290064951016 0.9906568589587165 1.0530738531051191 0.21494481587325964 0.06480700870564501 0.32962196221311474 46.7793050846438 0.009753478804373722 0.01858936279356802 1.555590880304621e-07 6.808104611580755 0.06241699414640267 ADQEQQDPLEYLQS(ph)DEEDDEKRGAQR ddPTM_A549_PD325901_60min_R1 1 ADQEQQDPLEYLQSDEEDDEKRGAQR 26 2 Q7RTV3 Q7RTV3 ZNF367 Zinc finger protein 367 1 ADQEQQDPLEYLQS(1)DEEDDEKRGAQR 85.337 1.8024e-07 6022900.0 1857.6 1475.8 1317.5 1301.1 1726.8 1822.0 1580.2 1539.9 1544.9 1603.4 1541.6 True False 2046.1821845071572 1600.1708453205504 1406.9134727711044 1381.4659919875055 1605.5155251366007 1807.1622360821752 1640.3353757186183 1509.1854864718202 1479.9732255344675 1502.1610503620443 1351.9929730075607 1.513456227479752 1.1835644690969866 1.0406218825541458 1.0217996835548493 1.1875176551880067 1.3366654059318615 1.2132721163998572 1.1162672562673004 1.094660442089584 1.1110716404246013 1.0 10.400871937884633 -2.000000007221513 0.03763492144284748 0.4594611381581241 2.288277908634409 0.20891246196782465 0.1279115561945346 643.4389213076681 1.796774824899354 24.51226851187866 76.4192452567256 0.009999999833718515 2.000000007221513 1.8288167704762848 ADQLADES(ph)LESTR ddPTM_A549_MK2206_60min_R1 1 ADQLADESLESTR 13 0 A0A0A0MSS0;P60880-2;P60880 A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 1 ADQLADES(0.992)LES(0.004)T(0.004)R 102.73 0.00012995 1201200.0 484.82 376.45 530.61 405.08 564.15 365.04 359.41 342.29 810.33 525.47 530.7 True False 566.6457632890258 395.60969705204536 605.8584767227737 504.3246181847321 481.16428232498595 403.66829050605907 424.71014472160545 390.81065571916116 626.7915488311079 406.7659620452356 398.9125434251217 1.4204761736086862 0.9917203747349792 1.5187751969912597 1.2642485840493427 1.2061899036656976 1.011921778744042 1.0646698172862195 0.9796900653050502 1.571250538901042 1.0196870686308415 1.0 8.639928678084997 -4.936168379929409 18.899073267996883 1.225027948670392 4.564979657974406 0.04259602451241529 0.21032554604490186 413.1557171294504 131278.50710702882 0.032726475639154304 4137.377244541515 1.1583281746929063e-05 4.936168379929409 3.339951709304014 ADQLADES(ph)LESTRR ddPTM_A549_MK2206_60min_R1 2 ADQLADESLESTRR 14 1 A0A0A0MSS0;P60880-2;P60880 A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 1 ADQLADES(0.996)LES(0.002)T(0.002)RR;ADQLADES(0.969)LES(0.015)T(0.015)RR 88.133 3.2445e-05 9495400.0 675.97 752.27 822.89 761.9300000000001 1145.12 832.8399999999999 625.79 875.01 1246.8600000000001 1169.2 1302.06 True False 790.0572101202151 790.5573297950384 939.5881757041957 948.6028842043378 976.6743649312914 920.9705760055502 739.4879426430351 999.0453471057391 964.4482008262744 905.0769079553334 978.722566972139 0.8072330574377217 0.8077440497165352 0.9600148268890817 0.9692255151927455 0.9979072700375305 0.940992480488873 0.7555644138571149 1.0207645974655233 0.9854153090696324 0.9247532840234365 1.0 9.934756154836984 -2.9097060844521594 0.3149369879897925 0.9901938678649074 9.392578973577105e-36 0.24055186263851147 0.07593735394823878 22.753656662204488 0.48102458902060946 0.023255320847248125 11.81265719243354 0.001231101656147116 2.9097060844521594 -0.9901938678649074 ADQLADES(ph)LESTRR ddPTM_A549_PD325901_60min_R1 2 ADQLADESLESTRR 14 1 A0A0A0MSS0;P60880-2;P60880 A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 1 ADQLADES(0.998)LES(0.001)T(0.001)RR;ADQLADES(0.919)LES(0.04)T(0.04)RR 86.37799999999999 4.6228e-05 12873500.0 817.87 598.81 936.66 987.1500000000001 849.26 763.64 747.0699999999999 723.2 738.2 1078.88 762.8199999999999 True False 900.8995603159286 649.2738202238777 1000.2273801941423 1048.1240135196883 789.6109073879478 757.4211690240347 775.5001576623902 708.7752086605757 707.1760211596501 1010.7593326771876 668.9979759143926 1.3466401883870738 0.9705168679119609 1.4951127151424073 1.566707301449011 1.1802889333240514 1.1321725869032482 1.1591965679753058 1.059457926897036 1.0570675048651312 1.5108555915967794 1.0 9.385858035704711 -7.578068085501944 1.2325753709998568 1.0305125155074522 1.3203476859611962 0.005642087510419391 0.20659752618797866 0.3217152906920385 0.9823635998026885 0.025287675288516227 0.04502644866967705 2.6419945323378545e-08 7.578068085501944 0.2898351704537441 ADQPNNRT(ph)SPGMAQK ddPTM_A549_PD325901_60min_R1 1 ADQPNNRTSPGMAQK 15 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 ADQPNNRT(0.5)S(0.5)PGMAQK 47.09 0.0083711 10230000.0 1308.4 1038.5 1005.6 1315.0 1094.8 1263.7 1042.5 1483.5 1438.0 1483.4 1706.9 True False 1441.2278048068288 1126.0180396160665 1073.84606316404 1396.224563418314 1017.9050248549621 1253.4088461783995 1082.1729079778895 1453.910428716763 1377.5658607797027 1389.737870841373 1496.9621209305967 0.9627683858232029 0.7522020924056981 0.7173501908628632 0.9327053396316678 0.6799804822196667 0.8373016448801052 0.72291268619753 0.971240626858968 0.9202409610226674 0.9283721020124631 1.0 10.547822000622892 -8.276576114029835 24.114244030289736 0.9619514878878315 0.7975077784319002 0.43142664496411265 0.08497554045766662 316.91558134302505 504875.2831472519 0.013048209576778002 0.015808275938190623 5.289612838436317e-09 8.276576114029835 -0.16444370945593123 ADRDESSPYAAMLAAQDVAQR ddPTM_A549_PD325901_60min_R1 2 ADRDESSPYAAMLAAQDVAQR 21 1 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 ; 119.79 9.402e-15 8164200.0 2590.3 2926.3 2750.2 2729.6 3404.3 2428.8999999999996 3054.6000000000004 3672.1000000000004 2829.5 3519.9 3599.5 False True 2853.2653491219244 3172.909570850742 2936.8451102960844 2898.2011926286164 3165.193712197432 2409.119843699227 3170.844474541256 3598.8570847932797 2710.5859548513004 3297.6529132901064 3156.7843191104794 0.9038518507105101 1.005108125899715 0.9303280849809943 0.9180865398638552 1.0026639111947067 0.763156300896119 1.004453948705225 1.1400389513488738 0.8586541495540281 1.0446240794237476 1.0 11.624239979465905 -11.317110151608416 1.909060405166805 1.0003326811540814 0.9345145326339043 0.0632838085813906 0.09310849479372355 0.8916183269590088 5.864056297667074 0.0712656309314814 0.013838444815258541 4.818255750422919e-12 11.317110151608416 -0.06581814852017709 ADRDQS(ph)PFSK ddPTM_A549_MK2206_60min_R1 2 ADRDQSPFSK 10 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ADRDQS(1)PFSK;ADRDQS(0.999)PFS(0.001)K 107.11 7.6715e-05 494530000.0 18913.2 19668.4 16560.4 15538.300000000001 24466.8 19085.5 19332.0 19474.6 24195.5 23075.7 24159.4 True False 22105.285776655244 20669.43754947123 18908.913736868555 19345.184197540806 20867.766130973974 21105.114942070446 22844.374162538796 22235.18418846119 18715.257882273967 17862.88334323032 18159.95421448066 1.2172544883967051 1.1381877567174439 1.0412423684301297 1.0652661327810535 1.1491089616478285 1.1621788630524923 1.2579532906708986 1.2244075026759134 1.0305784728989302 0.9836414306037482 1.0 14.148472944809061 -8.87064866603624 6.880504954803741 1.0134741704162913 1.1524947601221218 0.5456836599911159 0.06174482225703677 0.14040807335826427 8.088914028690693 0.011789812047600384 0.012514360969493855 1.3469495637626156e-09 8.87064866603624 0.13902058970583053 ADRDQS(ph)PFSK ddPTM_A549_PD325901_60min_R1 4 ADRDQSPFSK 10 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ADRDQS(1)PFSK;ADRDQS(0.999)PFS(0.001)K;ADRDQS(1)PFSK;ADRDQS(1)PFSK 160.22 8.123100000000001e-09 885776000.0 36440.5 37588.2 36796.2 37629.7 40272.3 36760.3 35477.4 36830.399999999994 38420.7 37698.6 40417.3 True False 40139.91273392177 40755.88952979939 39293.4114055257 39954.00110575068 37443.71257989269 36460.936304638606 36827.511870978204 36095.78877911013 36806.011590583286 35318.30396231668 35446.22832637424 1.1324170336073562 1.1497948146848227 1.1085357529079873 1.127172141923556 1.0563525189514225 1.0286266840274614 1.0389684208961718 1.0183252346837866 1.0383618604407985 0.9963910302986345 1.0 15.113344504494592 -6.879090237416656 1.3739420777300009 1.0196189027714397 1.1365454308161338 0.9132397584687657 0.015726006355001577 0.09010561315988688 0.33926710766484963 0.0026454502613165653 0.006584483891222298 1.321021124784092e-07 6.879090237416656 0.11692652804469406 ADRES(ph)RYEEEEEQSR ddPTM_A549_PD325901_60min_R1 1 ADRESRYEEEEEQSR 15 2 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 ADRES(0.976)RY(0.023)EEEEEQS(0.001)R 44.816 0.016685 2282500.0 242.2 393.49 306.32 109.79 269.05 166.03 238.36 154.8 158.68 150.85 174.52 True False 266.7879657017839 426.65078325327494 327.10871725179845 116.57147894881888 250.15285617211154 164.67790672707102 247.43092023559674 151.7123925617493 152.0112314245642 141.32530525577795 153.05514637343003 1.7430839277423837 2.7875624790316778 2.1371951548346213 0.76163057375675 1.6343968961473445 1.0759383831843414 1.616612875152234 0.9912269933844327 0.9931794848222949 0.9233619947085402 1.0 7.25790774507805 -6.186127930894444 5.751804926113405 1.0796935257272224 2.3015492270184943 0.6665340803844793 0.344475068068222 0.08600286410457847 5.021888109134939 0.044350451437350676 0.11941724124929819 6.514364710000546e-07 6.186127930894444 1.2218557012912719 ADREVQAEQPS(ph)SSSPR ddPTM_A549_MK2206_60min_R1 1 ADREVQAEQPSSSSPR 16 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ADREVQAEQPS(0.25)S(0.25)S(0.25)S(0.25)PR 90.334 8.8197e-06 5498500.0 228.06 434.37 245.29 170.79 322.84 229.36 0.0 168.91 342.03 381.07 432.91 True False 266.55095246832866 456.47757765572294 280.0758103980875 212.63355766705442 275.35066366356205 253.63072296315394 0.0 192.85350976518026 264.56075110967623 294.98602233539094 325.40649929182104 0.8191322332172863 1.4027918269891677 0.8606951951101584 0.6534397995424392 0.8461744441577074 0.7794273424628211 0.0 0.5926541423877073 0.8130161864788724 0.9065154598244538 1.0 8.346099255789595 -5.97606001755523 24.03233460863448 0.7927891120068291 1.11615788377683 0.1839263573652642 0.2888342977425627 215.0694412293227 215894.7044307563 0.04289478374160233 0.13335332541820843 1.0566714718510715e-06 5.97606001755523 0.3233687717700009 ADREVQAEQPSSS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 ADREVQAEQPSSSSPR 16 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ADREVQAEQPS(0.072)S(0.072)S(0.428)S(0.428)PR 86.641 1.678e-05 15842000.0 400.15 263.63 228.68 301.58 296.09 206.77 177.52 164.42 294.8 298.83 366.23 True False 440.7729334251393 285.84702530956537 244.19959996455108 320.2079116621259 275.29365985504745 205.086133674375 184.27562074267138 161.14051411500526 282.410581194615 279.9618228013533 321.18603172324794 1.3723290862316646 0.889973401943791 0.7603057911776415 0.9969546618952445 0.8571159162122469 0.6385275616565069 0.5737348531440921 0.5017046141466484 0.8792741691766843 0.8716500568199811 1.0 8.327265341653007 -5.2645966814835345 4.878557819991573 0.8554415310590244 1.3985995644098947 0.46971932822717355 0.16580743307491233 0.1416124438418972 9.923231881381257 0.026648666270999134 0.25869296601694536 5.437550689370139e-06 5.2645966814835345 0.5431580333508703 ADREVQAEQPSSSS(ph)PR ddPTM_A549_MK2206_60min_R1 3 ADREVQAEQPSSSSPR 16 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ADREVQAEQPS(0.161)S(0.161)S(0.161)S(0.518)PR;ADREVQAEQPS(0.002)S(0.067)S(0.246)S(0.684)PR;ADREVQAEQPSS(0.003)S(0.025)S(0.971)PR 217.17 3.9626e-47 164092800.0 4410.9400000000005 3752.8 4390.34 3366.3 5326.849999999999 3958.3199999999997 3823.88 3628.79 4736.15 5336.869999999999 5627.84 True False 5155.398834870871 3943.8014904951947 5012.956229047816 4191.043651118948 4543.277421435525 4377.186795079835 4518.629498895557 4143.182095203293 3663.419587077425 4131.267360382811 4230.292007517688 1.2186862811619548 0.9322764205134377 1.1850142307290488 0.9907220692261927 1.07398671613251 1.0347245030132906 1.068160186309943 0.9794080616279938 0.8659968580341808 0.9765915338801908 1.0 12.046541537429867 -8.378271925007066 3.7358563874037123 0.9362224688531228 1.0665754374201821 0.320198869729734 0.08144902279803103 0.19971092673965612 5.029781138903647 0.013353747929055974 0.01625871310609231 4.185314277817788e-09 8.378271925007066 0.13035296856705936 ADREVQAEQPSSSS(ph)PR ddPTM_A549_PD325901_60min_R1 3 ADREVQAEQPSSSSPR 16 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ADREVQAEQPSSS(0.029)S(0.971)PR;ADREVQAEQPSS(0.005)S(0.163)S(0.831)PR;ADREVQAEQPSS(0.007)S(0.028)S(0.965)PR 227.06 1.6792e-55 268012200.0 4147.0 4180.5 3978.88 4132.33 4861.849999999999 4450.85 4212.58 5021.69 4700.66 4830.92 5215.16 True False 4568.000387139955 4532.805406466026 4248.91072374914 4387.574638897647 4520.370428471961 4414.603753274615 4372.892037112228 4921.528453510405 4503.107607185481 4525.894886750038 4573.728381623064 0.9987476312528476 0.9910526004732894 0.9289818653903849 0.9592993446061707 0.9883338168122331 0.9652089903309954 0.9560891404662806 1.076043009743381 0.9845594734656015 0.9895416844023318 1.0 12.159154976139506 ADRGEAERGS(ph)GGS(ph)S(ph)GDELREDDEPVK ddPTM_A549_PD325901_60min_R1 2 ADRGEAERGSGGSSGDELREDDEPVK 26 3 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 3 ADRGEAERGS(1)GGS(1)S(1)GDELREDDEPVK;ADRGEAERGS(1)GGS(1)S(1)GDELREDDEPVK 67.69 7.7426e-05 24310000.0 1093.9 1623.38 1765.1599999999999 2042.0 1730.5 1400.5 1255.35 1274.8 1242.22 2060.3999999999996 1906.8400000000001 True False 1204.9519227133824 1760.1879298526053 1884.9543723693664 2168.12970228152 1608.9556499009068 1389.0947923342944 1303.1230312038776 1249.3731139387469 1190.013813336414 1930.3059923699352 1672.3107684546835 0.720531103095647 1.0525483439176353 1.1271555550115715 1.2964873175366822 0.9621152241862793 0.830643932059292 0.7792349698304235 0.7470938640748235 0.711598487424714 1.1542746891199265 1.0 10.707627255554309 -7.002532643188629 24.909883913722176 0.843975572873232 1.064279580252053 0.17973864567514397 0.1727011235673656 100.75978651908609 991046.9988601875 0.024055749947589158 0.044909620640629595 9.941853444761311e-08 7.002532643188629 0.22030400737882105 ADRLEGDRSEGS(ph)GQENENEDEE ddPTM_A549_MK2206_60min_R1 2 ADRLEGDRSEGSGQENENEDEE 22 2 Q58WW2;Q58WW2-2;Q58WW2-4;Q58WW2-3 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 1 ADRLEGDRS(0.134)EGS(0.866)GQENENEDEE;ADRLEGDRS(0.016)EGS(0.984)GQENENEDEE 167.72 1.7527999999999998e-40 13871900.0 674.48 922.61 907.05 725.48 958.49 707.1500000000001 702.37 727.0 997.4000000000001 1511.13 1356.62 True False 788.3157345472176 969.5669082140721 1035.6833292086308 903.2226325680349 817.4973907040248 781.9801436318206 829.9815373754592 830.0544763441242 771.4904925205126 1169.7646834746356 1019.7338131927435 0.7730603068648223 0.9508039212492122 1.015640862163774 0.8857435351095038 0.8016772417739833 0.7668473218353659 0.8139197961640814 0.8139913236232293 0.7565606656751025 1.1471274839971735 1.0 9.993976891266021 -5.21676695273833 20.389123091478048 0.8728403607009577 0.7730565784234242 0.0523743592012329 0.11862635152921151 5319.282801362687 2427194.4453084893 0.014878242522955368 5.54762455916761 6.070619984394419e-06 5.21676695273833 -0.09978378227753348 ADRLEGDRSEGS(ph)GQENENEDEE ddPTM_A549_PD325901_60min_R1 2 ADRLEGDRSEGSGQENENEDEE 22 2 Q58WW2;Q58WW2-2;Q58WW2-4;Q58WW2-3 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 1 ADRLEGDRS(0.013)EGS(0.987)GQENENEDEE;ADRLEGDRS(0.003)EGS(0.997)GQENENEDEE 170.55 1.3758999999999998e-40 19504000.0 1161.25 1284.13 947.23 1064.6100000000001 1377.92 1162.75 1436.42 1759.3400000000001 1518.04 1258.62 1087.65 True False 1279.1392451329325 1392.3481417546275 1011.5147239567153 1130.3685417952645 1281.13965276594 1153.2809495085346 1491.0837491391842 1724.2485835244693 1454.2420579263014 1179.1505184025666 953.875945181418 1.3409911965959604 1.4596742362444377 1.0604258646697868 1.1850267820521245 1.3430883326471552 1.2090471044315847 1.5631841401091149 1.8076235093616222 1.5245609927292154 1.2361675796094256 1.0 9.897657840796807 -10.867877209581627 1.1927045761929325 1.006227351973491 1.3948858204125834 0.1771926787796747 0.20513684116789455 0.45115791225405044 1.167873591702568 0.13838305518101726 0.03581992026425976 1.355572626525423e-11 10.867877209581627 0.38865846843909235 ADS(ph)DSEDKGEESKPK ddPTM_A549_MK2206_60min_R1 4 ADSDSEDKGEESKPK 15 2 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 CBX1 Chromobox protein homolog 1 1 ADS(0.976)DS(0.024)EDKGEESKPK;ADS(0.88)DS(0.12)EDKGEESKPK;ADS(0.998)DS(0.002)EDKGEESKPK;ADS(0.986)DS(0.014)EDKGEESKPK 178.72 2.2948e-28 436181000.0 19381.4 19722.2 18463.8 18129.6 16038.2 8096.3 7570.1 6880.5 14546.9 25583.1 26802.6 True False 22652.50649026427 20725.975739672867 21082.24447807983 22571.352813868678 13679.002025675072 8953.04509211102 8945.489181038429 7855.83194564752 11252.050376625866 19803.859941765393 20146.774705871798 1.1243738425119816 1.0287490698762944 1.0464327310879884 1.1203457200169233 0.6789673397046682 0.4443909867866665 0.4440159435758845 0.3899300041985346 0.5585038072295733 0.9829791731375017 1.0 14.298261275956161 -6.764139288993095 24.898239343107775 0.6962176411556106 1.0739204548554957 0.5250006282533639 0.1958918945674138 58.425260905289555 538799.1612335133 0.035535834405435084 0.06938253411012803 1.721316417652056e-07 6.764139288993095 0.3777028136998851 ADS(ph)DSEDKGEESKPK ddPTM_A549_PD325901_60min_R1 5 ADSDSEDKGEESKPK 15 2 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 CBX1 Chromobox protein homolog 1 1 ADS(0.91)DS(0.09)EDKGEESKPK;ADS(0.955)DS(0.045)EDKGEESKPK;ADS(0.996)DS(0.004)EDKGEESKPK;ADS(0.997)DS(0.003)EDKGEESKPK;ADS(0.992)DS(0.008)EDKGEESKPK 156.92 5.7852e-20 281666700.0 31956.9 30890.0 35665.9 32887.600000000006 35941.2 33087.5 35815.4 36445.700000000004 35684.899999999994 33162.399999999994 36343.1 True False 35201.14096257364 33493.20870846444 38086.40245047963 34918.992358841206 33416.81410240883 32818.04637012565 37178.37464593888 35718.76192240144 34185.18775058252 31068.52040446939 31873.12909789254 1.1044143439591299 1.0508290104054772 1.1949376646862675 1.0955621034757475 1.048432176200057 1.0296462035255771 1.1664488457268265 1.1206543861036593 1.0725394311173186 0.9747558926219029 1.0 14.960053040096364 -9.967098138247765 0.7235733675114449 1.003676942534452 1.100169511717964 0.42913377413603004 0.048350771409616584 0.5087220932739451 0.5395961495587773 0.023841619172057738 0.010348977345252195 1.0787029383862544e-10 9.967098138247765 0.0964925691835119 ADS(ph)GEEENTK ddPTM_A549_MK2206_60min_R1 2 ADSGEEENTK 10 0 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 ADS(0.929)GEEENT(0.071)K;ADS(1)GEEENTK 127.56 1.5593e-06 35570000.0 10712.2 8785.2 7897.8 4733.0 1745.5700000000002 793.0 639.65 1048.81 1464.23 12863.900000000001 13889.7 True False 12520.157471854913 9232.329155376883 9017.826798328562 5892.585212472442 1488.7989653425975 876.914733649203 755.8661252362891 1197.482029345916 1132.5842428948374 9957.936055633436 10440.50415378163 1.1991908903479547 0.8842800136268193 0.8637348029848 0.5643966158797133 0.14259837871941683 0.08399160813815468 0.0723974737333454 0.11469580507874028 0.10847984218124244 0.9537792341212369 1.0 13.349903758372891 -10.99853481994291 1.317485250078777 0.9955193011101572 0.40163641177788545 0.21914296029756697 0.3761047515191217 0.5561729957937388 1.739208858618786 0.288360792316958 0.06794697523132892 1.003379399095022e-11 10.99853481994291 -0.5938828893322717 ADS(ph)GEEENTK ddPTM_A549_PD325901_60min_R1 2 ADSGEEENTK 10 0 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 ADS(1)GEEENTK;ADS(1)GEEENTK 165.35 3.0049000000000002e-09 83344000.0 9127.5 8324.2 8062.6 7500.700000000001 8068.700000000001 6175.200000000001 5533.0 6622.8 7863.400000000001 8206.4 10395.8 True False 10054.117080689639 9025.709547782439 8609.776520352412 7964.00120367434 7501.982347503873 6124.911218581038 5743.561342773776 6490.703058513912 7532.9286437101 7688.246503487014 9117.182504405811 1.1027658024648581 0.9899669709826288 0.9443461854790997 0.8735156063647728 0.8228399885467462 0.6717986851333972 0.6299710837200245 0.7119198343761713 0.8262342713957813 0.8432700014255199 1.0 13.154372339871166 -5.661701103011476 1.3992707384945637 0.8543846149083396 1.1139801932316793 0.40147299453240726 0.10831391648106793 0.7649153147961459 2.135066781472821 0.020730139116067612 0.22607814975788373 2.179209065946416e-06 5.661701103011476 0.2595955783233397 ADS(ph)GEEENTKNGGEK ddPTM_A549_MK2206_60min_R1 1 ADSGEEENTKNGGEK 15 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 ADS(0.999)GEEENT(0.001)KNGGEK 68.168 0.00075752 18910000.0 4533.3 5676.5 5082.5 3655.6 1398.3 990.72 728.17 833.65 1262.2 5778.7 6872.7 True False 5298.4102114560865 5965.409603708153 5803.274924979735 4551.2221641061205 1192.6119223168087 1095.557332813288 860.4690634148498 951.8224404460512 976.3137153192215 4473.28765651855 5166.0189131295165 1.0256273351981147 1.1547401788535796 1.1233553385239499 0.8809921606247162 0.2308570569274857 0.21206994229713566 0.16656328168446197 0.18424679747628872 0.18898763859301893 0.8659061710265172 1.0 12.334837209927565 -6.568747343615803 5.242595304729357 0.4878985850212772 1.0929134255618147 0.5495207540101772 0.276866184299707 0.16294471175167544 10.259944125490856 0.05342349918526604 0.1144167770183142 2.6993093335660704e-07 6.568747343615803 0.6050148405405376 ADS(ph)GEEENTKNGGEK ddPTM_A549_PD325901_60min_R1 2 ADSGEEENTKNGGEK 15 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 ADS(1)GEEENTKNGGEK;ADS(0.997)GEEENT(0.003)KNGGEK 126.8 8.671200000000001e-09 88453000.0 20460.0 23326.0 23163.0 26226.0 25737.0 26821.0 26642.0 27199.0 24053.0 26172.0 25264.0 True False 22537.08413814407 25291.763882604122 24734.980470434202 27845.920456432486 23929.321907829904 26602.578668474205 27655.87588906179 26656.494607797275 23042.136056560637 24519.49545345853 22156.68816169113 1.0171684492590658 1.1414956828400704 1.1163663219849316 1.2567726843120006 1.0800044543301222 1.200656816322848 1.2481953840411377 1.2030902097492304 1.0399630074859494 1.1066408153838032 1.0 14.435454632336512 -8.859443507243608 5.391216725877853 1.017465349674924 1.1609531280850032 0.28557195826863346 0.07272882346821952 0.1297016629809054 5.831471487580487 0.011823567848345196 0.012536339174418317 1.382154183965893e-09 8.859443507243608 0.1434877784100792 ADS(ph)LLAVVK ddPTM_A549_MK2206_60min_R1 1 ADSLLAVVK 9 0 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 ADS(1)LLAVVK 117.7 0.00017532 3557200.0 483.13 627.22 530.72 424.65 703.52 505.79 635.95 514.43 548.63 593.84 588.7 True False 564.6705326055587 659.1428189267732 605.9840763768314 528.6892690632632 600.0331399473083 559.3123620837705 751.4938831298654 587.3520278758014 424.366180982082 459.6911315602084 442.50954270655575 1.2760640802271068 1.4895561684279313 1.3694260075622404 1.194752243826426 1.35597785366905 1.2639554814181058 1.6982546377044085 1.3273205912878945 0.9589989368059679 1.0388276120523041 1.0 8.789564756986131 -8.726694371099933 5.758424364209529 0.9802834272920704 1.378579242071468 0.629777388236983 0.12723098810530933 0.07507848960343598 6.56664520488153 0.021055936969150015 0.02357923166182376 1.876314474632331e-09 8.726694371099933 0.3982958147793976 ADS(ph)LLAVVK ddPTM_A549_PD325901_60min_R1 2 ADSLLAVVK 9 0 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 ADS(1)LLAVVK;ADS(1)LLAVVK 138.25 4.3029e-05 9291900.0 2431.8999999999996 2938.5 2571.9 2891.63 2983.1 2505.3 2716.27 2561.41 3013.7 2546.7 2939.5 True False 2678.7846977298423 3186.137707666648 2746.4446000910834 3070.239417731789 2773.5773471363163 2484.8976674295673 2819.6391412499765 2510.3206681627266 2887.044669424054 2385.900927377459 2577.96013502577 1.039110210175172 1.2359142658483346 1.0653557294297065 1.190956902714517 1.0758806195071713 0.9639007344094278 1.0937481549619814 0.9737624077486493 1.119895001555249 0.9254995432090377 1.0 11.332014239034534 -6.985231944749272 21.303740004878655 1.0471927253591258 1.135132612384558 0.30122967339103257 0.07638502273929076 43.6520169672115 62967.461555629605 0.009753338340376708 0.01842041781186296 1.034589473293994e-07 6.985231944749272 0.0879398870254322 ADS(ph)LPRPQGITVQFAGR ddPTM_A549_PD325901_60min_R1 1 ADSLPRPQGITVQFAGR 17 1 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 ADS(1)LPRPQGITVQFAGR 69.922 0.00038434 5610400.0 1124.8 1502.5 1090.4 856.68 1210.8 1287.7 1089.8 1242.3 1346.9 1110.8 1401.6 True False 1238.9888679660044 1629.1209480242087 1164.4011011078644 909.5951779385571 1125.7575850332373 1277.213398135574 1131.2729353614418 1217.521351934503 1290.2944769709202 1040.6638984296853 1229.212085474442 1.0079536986392295 1.3253375615774337 0.9472743677576501 0.7399822932813734 0.9158367366675589 1.0390504724354421 0.9203236355464254 0.990489246178029 1.0496923128386768 0.8466105326551665 1.0 10.263518141190087 -5.789245827108274 24.993680306819734 0.9859835540634343 1.1666459125726292 0.30469673678895826 0.11604453438726021 172.96272501202336 155466.64622046292 0.015226722295268919 0.04735635061246183 1.6246288940149822e-06 5.789245827108274 0.18066235850919488 ADS(ph)PAGPESSR ddPTM_A549_MK2206_60min_R1 2 ADSPAGPESSR 11 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ADS(0.999)PAGPES(0.001)SR;ADS(1)PAGPESSR 151.55 6.499999999999999e-12 15812800.0 1881.8700000000001 1414.0700000000002 1624.75 1519.4099999999999 2171.5 1716.8600000000001 1840.4 1568.52 2335.4 2359.3 2565.2 True False 2199.4836486958443 1486.0401230186903 1855.1639811826515 1891.6655182089069 1852.0752265686567 1898.5369856405675 2174.7768574765373 1790.8625133910384 1806.43562886746 1826.3324913949878 1928.190044081633 1.140698581784984 0.7706917311288516 0.9621271445088481 0.9810576110042503 0.96052525126006 0.984621298853771 1.127885119079302 0.9287790479407845 0.9368555938830383 0.9471745261836167 1.0 10.913031536511177 -5.990290987741661 24.997878842887925 0.9785689940152961 0.9333737941592324 0.0027394689777937575 0.09428037189454884 594.2155295375226 1529906.3363450067 0.011692284599305117 0.036290091018733345 1.022607591023159e-06 5.990290987741661 -0.045195199856063684 ADS(ph)PAGPESSR ddPTM_A549_PD325901_60min_R1 3 ADSPAGPESSR 11 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ADS(1)PAGPESSR;ADS(1)PAGPESSR;ADS(1)PAGPESSR 156.36 3.4564000000000003e-13 24319300.0 2768.5 2955.1800000000003 2336.87 2894.6000000000004 2774.82 2374.89 2353.26 2572.24 2464.49 2696.16 2587.54 True False 3049.5560819380175 3204.223389805114 2495.46405094088 3073.3928678864313 2579.9262158093247 2355.5496832322706 2442.8145970532833 2520.934655316755 2360.9160557948353 2525.9239974704556 2269.2889837675043 1.3438376970724561 1.4119944232423933 1.0996678117204257 1.3543417739524486 1.1368874719191102 1.0380122144344768 1.0764669526565493 1.1108918579120166 1.04037699591491 1.1130904946609674 1.0 11.148024626109972 -5.597026080555274 0.3410907002683759 1.004547474819236 1.61304965589212 0.6155200925391873 0.08475401858871534 1.9132212148392007 0.17918585429380635 0.023488992107829437 0.4609920447334853 2.5291461098385863e-06 5.597026080555274 0.6085021810728839 ADS(ph)PAGPESSRR ddPTM_A549_MK2206_60min_R1 2 ADSPAGPESSRR 12 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ADS(1)PAGPESSRR;ADS(0.985)PAGPES(0.008)S(0.008)RR 62.287 0.0032075000000000003 12135200.0 630.91 1014.72 797.63 899.72 1209.21 1011.77 750.42 746.35 1625.17 1570.31 1488.1999999999998 True False 737.3921837314447 1066.3649137804528 910.7459278724217 1120.151440389965 1031.3368108308007 1118.83482984143 886.7616004061844 852.1473981010141 1257.0715898632056 1215.57588037234 1118.6388677694854 0.6591869860572348 0.9532700360275658 0.8141554474040468 1.0013521545371435 0.9219568893464599 1.0001751790301507 0.7927148125778486 0.761771669707988 1.123751038947671 1.0866562171187046 1.0 10.127528648262091 -8.770286669386065 24.997589311487022 1.0584379942746458 0.873245798220322 0.43891419308455226 0.10357283460017566 139.3632836345606 393763.06742086273 0.018125849536188073 0.01943582919543426 1.6971230445658109e-09 8.770286669386065 -0.1851921960543238 ADS(ph)PAGPESSRR ddPTM_A549_PD325901_60min_R1 1 ADSPAGPESSRR 12 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ADS(0.982)PAGPES(0.009)S(0.009)RR 45.614 0.019705 7441300.0 553.33 480.82 828.45 847.13 854.25 877.87 688.66 799.17 548.29 858.4 884.36 True False 609.5036542599831 521.3403888379368 884.6735988745509 899.4552961281802 794.2504270025131 870.7209177768709 714.8673331492113 783.2299274132637 525.2472780298356 804.2004775045399 775.5893264199317 0.7858587444381309 0.672186131344031 1.14064694902152 1.1597056141553745 1.024060543314488 1.1226571693502543 0.9217085753990336 1.009851348817035 0.6772234482059492 1.0368895626976655 1.0 9.599149139136152 ADS(ph)PLEQPEGSPLTQDDR ddPTM_A549_MK2206_60min_R1 2 ADSPLEQPEGSPLTQDDR 18 0 P09603-3;P09603-2;P09603 P09603-3 CSF1 Macrophage colony-stimulating factor 1;Processed macrophage colony-stimulating factor 1 1 ADS(1)PLEQPEGSPLTQDDR;ADS(1)PLEQPEGSPLTQDDR 188.04 6.791499999999999e-40 19066300.0 999.62 1042.68 1213.9099999999999 1012.25 1445.97 1050.51 884.47 1076.88 1170.49 1291.6 1547.1399999999999 True False 1168.3314176374242 1095.7479583536362 1386.0606914278694 1260.2512954416288 1233.269728464876 1161.6742709278985 1045.1667502348791 1229.5310378066854 905.3758838884445 999.8266629448419 1162.9424391082398 1.0046339168199216 0.9422202866668713 1.1918566601548395 1.0836746970967943 1.0604735771880198 0.9989095176702695 0.8987261235700774 1.0572587227528705 0.7785216649094853 0.8597387362624093 1.0 10.1835639757396 -7.664722324878181 1.5272931856679486 0.9041368756187396 1.060602835215258 0.3494133407137461 0.08825430261982314 0.35693287717696676 1.6905221496802099 0.017388145562138486 0.02846840941503405 2.1641017445071673e-08 7.664722324878181 0.15646595959651854 ADS(ph)PLEQPEGSPLTQDDR ddPTM_A549_PD325901_60min_R1 2 ADSPLEQPEGSPLTQDDR 18 0 P09603-3;P09603-2;P09603 P09603-3 CSF1 Macrophage colony-stimulating factor 1;Processed macrophage colony-stimulating factor 1 1 ADS(1)PLEQPEGSPLTQDDR;ADS(1)PLEQPEGSPLTQDDR 112.3 1.3997999999999999e-09 28036000.0 936.31 909.1199999999999 777.52 887.1800000000001 1233.29 991.04 458.24 1051.12 798.76 1033.5900000000001 798.01 True False 1031.363501925008 985.7347329569169 830.2871828075811 941.9790936680313 1146.6679650195265 982.9692988182652 475.67857395854935 1030.1545870123123 765.1908949627232 968.3289510064276 699.8598290021823 1.4736715256188706 1.4084745146214745 1.186362109097409 1.3459539391067035 1.6384251781594268 1.4045231031758505 0.6796769213582997 1.471944158419614 1.093348786790186 1.3836041316830718 1.0 9.45092219147057 -7.606067072014821 24.99998810295494 1.0585044153028846 1.4071451638525687 0.2691899638376156 0.22057300822083206 18.421212270436893 5534.044612228627 0.028833955029456744 0.042767668146252075 2.4770394765383867e-08 7.606067072014821 0.3486407485496841 ADS(ph)PVNGLPK ddPTM_A549_MK2206_60min_R1 2 ADSPVNGLPK 10 0 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 ADS(1)PVNGLPK;ADS(1)PVNGLPK 132.86 9.4488e-07 92498000.0 10968.3 11563.0 10692.5 9691.400000000001 14285.3 11503.6 11049.0 11371.8 16129.900000000001 14515.8 16454.1 True False 12819.480890811059 12151.507310433795 12208.857281917519 12065.793435063477 12183.951293622475 12720.903316528334 13056.46027942744 12983.787474676905 12476.503404157425 11236.670698339069 12368.092859942139 1.0364961709117562 0.9824883632455719 0.9871252924902955 0.9755581213448234 0.9851115634071553 1.0285258576711436 1.0556567150069507 1.0497808855178377 1.0087653404160966 0.9085208872204115 1.0 13.594335435754981 -7.247686266738508 24.731462080679044 1.0138563356454393 0.9914172388559139 0.025283305314702798 0.03929844091760136 1094.576592071345 1968314.1934846935 0.0038514597130780925 0.006642436599165594 5.653452313321244e-08 7.247686266738508 -0.02243909678952538 ADS(ph)PVNGLPK ddPTM_A549_PD325901_60min_R1 2 ADSPVNGLPK 10 0 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 ADS(1)PVNGLPK;ADS(1)PVNGLPK 142.76 4.7511999999999996e-08 148756000.0 14216.400000000001 14359.4 15080.2 14261.3 18010.5 16782.7 15081.1 14469.400000000001 17392.4 15710.699999999999 16986.7 True False 15659.638462439456 15569.51703231868 16103.63305660934 15142.18811123773 16745.50461285195 16646.02725548646 15655.019513194573 14180.79646597529 16661.457911700225 14718.723720795162 14897.443587563283 1.0511627965158044 1.0451133404738286 1.0809662048361781 1.0164286256387483 1.1240522250966245 1.1173747467238564 1.0508527467265412 0.9518946242437014 1.1184105389470702 0.9880033197831795 1.0 13.862777163930229 -11.142152065486497 1.5116312500682105 0.9999699573696117 1.0686262684119185 0.21142332766284966 0.048476554544010855 0.5348200100695829 2.1881602157737543 0.03651659359755785 0.007799082198938359 7.2085503212486675e-12 11.142152065486497 0.06865631104230685 ADS(ph)RESLKPAAK ddPTM_A549_MK2206_60min_R1 4 ADSRESLKPAAK 12 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ADS(0.895)RES(0.105)LKPAAK;ADS(1)RESLKPAAK;ADS(0.998)RES(0.002)LKPAAK;ADS(1)RESLKPAAK 109.79 3.0419e-05 1552510000.0 20204.3 21761.8 22304.4 18375.6 26845.4 22314.9 22318.9 22199.4 31161.9 30248.4 27416.7 True False 23614.29189229086 22869.382667836904 25467.49930874924 22877.622824912018 22896.47722188634 24676.24790656822 26373.955229478954 25346.232932811232 24103.77940532882 23415.26543157382 20608.37672757402 1.1458589002158004 1.1097129565395443 1.2357838584478955 1.1101128015726607 1.111027691533358 1.1973892089012224 1.2797686871761513 1.2298995339549454 1.1696107715790127 1.136201348660527 1.0 14.330943251272375 -10.429962617337857 0.8611897296722713 1.0039852600725672 1.1764281972208386 0.20192541839182432 0.06605362259261394 0.3347369324764603 0.4625083831383801 0.03415056087147878 0.011062706260200015 3.7156721102256763e-11 10.429962617337857 0.1724429371482714 ADS(ph)RESLKPAAK ddPTM_A549_PD325901_60min_R1 8 ADSRESLKPAAK 12 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ADS(1)RESLKPAAK;ADS(0.999)RES(0.001)LKPAAK;ADS(1)RESLKPAAK;ADS(0.933)RES(0.067)LKPAAK;ADS(0.997)RES(0.003)LKPAAK;ADS(1)RESLKPAAK;ADS(0.747)RES(0.253)LKPAAK;ADS(0.999)RES(0.001)LKPAAK 126.88 1.2909e-07 2478040000.0 75359.9 78084.1 80917.40000000001 82219.7 87899.2 73562.1 85519.4 81548.3 75830.3 81016.20000000001 79910.70000000001 True False 83010.38157097388 84664.5211431727 86408.94135985461 87298.22413451313 81725.46342777801 72963.03464703653 88773.88756501129 79921.75518309642 72643.41619797159 75900.82330568877 70082.19049566389 1.1844718463260633 1.2080746983559403 1.232965761325638 1.2456549020098684 1.166137400240572 1.0411066510763656 1.266711085043837 1.1404003587479379 1.0365460280877803 1.0830258410713474 1.0 16.096760248207755 -8.711613036358587 2.9333874997012406 1.0154226771200074 1.1905591030520526 0.5463325150677674 0.05959008836427705 0.11261968728256572 1.9374970092059147 0.010072317516909646 0.011131149172530358 1.942616010020269e-09 8.711613036358587 0.17513642593204515 ADS(ph)RESLKPAAKPLPSK ddPTM_A549_MK2206_60min_R1 3 ADSRESLKPAAKPLPSK 17 3 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ADS(0.991)RES(0.009)LKPAAKPLPSK;ADS(1)RESLKPAAKPLPSK;ADS(0.999)RES(0.001)LKPAAKPLPSK 105.96 3.2816e-09 923390000.0 14601.0 17419.5 17132.5 15544.5 22860.3 17255.2 17726.7 19237.8 27509.3 28691.8 29890.5 True False 17065.291839823163 18306.078145299784 19562.14611947178 19352.903197819112 19497.58015285629 19081.133810925243 20947.411931878574 21964.817063291608 21278.48747332517 22210.30245267947 22467.86391416732 0.7595422468738777 0.8147671810383682 0.8706722719259791 0.8613592850549517 0.8677985689846516 0.8492633693981677 0.9323277019970728 0.9776103837553284 0.947063216806642 0.9885364508850598 1.0 14.455575349330857 -2.000000000004785 0.14686566184902436 1.0272646575326927 0.09399215933999336 0.8872978194725415 0.024792234499030293 14.641732434289207 0.13507639055323964 0.04976757913792903 2.9222728652681025 0.00999999999988982 2.000000000004785 -0.9332724981926993 ADS(ph)RESLKPAAKPLPSK ddPTM_A549_PD325901_60min_R1 5 ADSRESLKPAAKPLPSK 17 3 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ADS(0.999)RES(0.001)LKPAAKPLPSK;ADS(0.999)RES(0.001)LKPAAKPLPSK;ADS(0.5)RES(0.5)LKPAAKPLPS(0.001)K;ADS(0.953)RES(0.047)LKPAAKPLPSK;ADS(0.998)RES(0.002)LKPAAKPLPSK 150.36 1.8304e-17 2473498400.0 71538.4 68032.7 74036.4 67717.4 85505.2 87065.4 84671.6 87949.6 91881.0 78136.8 87788.5 True False 78800.92570421349 73766.05438978135 79060.9553210404 71900.15000062612 79499.6097289264 86356.36824884135 87893.8240720773 86195.37623287366 88019.5610947843 73203.22911309033 76991.0710371526 1.0235073319890242 0.9581118095393817 1.0268847316449068 0.9338764746619798 1.0325822028188605 1.1216413421131584 1.141610616504653 1.1195502942319047 1.1432437542310565 0.9508015426589609 1.0 16.232403519936643 -7.003997004625507 9.314696286909866 1.0828623149705128 0.9861067453185804 0.3413717187880858 0.06092256712004599 0.10363010332676321 128.56733650129772 0.009154839947533387 0.016735261259297377 9.908387787879543e-08 7.003997004625507 -0.09675556965193233 ADS(ph)VPGTYR ddPTM_A549_PD325901_60min_R1 1 ADSVPGTYR 9 0 H0YMA4;A0A0U1RQM0;Q15004;H0YKX3;A0A0U1RQC1;Q15004-2 H0YMA4 KIAA0101 PCNA-associated factor 1 ADS(0.588)VPGT(0.407)Y(0.005)R 66.758 0.0052232 6700500.0 3055.1 3140.3 2798.8 2697.3 3369.4 3302.3 3612.4 3051.9 3704.2 3557.1 3651.8 True False 3365.2515029542487 3404.9441018838074 2988.743398551624 2863.9060949872387 3132.744967798969 3275.407163674074 3749.871858781129 2991.0274603307653 3548.5253557024885 3332.504098941515 3202.651750667497 1.0507703506173791 1.0631640174971098 0.9332089878110257 0.8942296315515239 0.9781722184268214 1.0227172414207737 1.1708646929843622 0.9339221661260471 1.1079960082962204 1.0405452601104552 1.0 11.645051215806248 -7.434463896215147 5.239627018915429 1.0515827663110098 0.9813939332976184 0.16505573212699376 0.07109921090136433 0.3256673749627374 14.653351755023406 0.011302260937773596 0.01812154665501516 3.677359627471396e-08 7.434463896215147 -0.0701888330133914 ADSDS(ph)EDKGEESKPK ddPTM_A549_PD325901_60min_R1 2 ADSDSEDKGEESKPK 15 2 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 CBX1 Chromobox protein homolog 1 1 ADS(0.308)DS(0.692)EDKGEESKPK;ADS(0.408)DS(0.591)EDKGEESKPK 139.9 3.5656999999999996e-11 631980000.0 49748.0 49006.0 50710.0 50597.0 57100.0 54265.0 57210.0 55413.0 53493.0 53922.0 57385.0 True False 54798.38033745802 53135.90760657193 54151.485544002004 53722.261775875624 53089.49298430613 53823.08383150344 59387.15785651323 54307.74424434245 51244.87523691841 50517.35571761393 50327.008793486595 1.0888463600592553 1.0558129497545037 1.0759925304960778 1.0674638343065692 1.0548906890563514 1.069467173230238 1.1800255822912966 1.0790973981225573 1.0182380488218208 1.0037822022148863 1.0 15.61904523275791 -8.786788929383285 4.4631962762657755 1.0080391304264682 1.0842113799482087 0.528526818346977 0.03237179779643343 0.11895289355467108 5.412625082737779 0.005904569003306892 0.006379399943706424 1.6338458171940647e-09 8.786788929383285 0.07617224952174051 ADSEPES(ph)PLNASYVYK ddPTM_A549_PD325901_60min_R1 1 ADSEPESPLNASYVYK 16 0 Q5T1V6-2;Q5T1V6 Q5T1V6-2 DDX59 Probable ATP-dependent RNA helicase DDX59 1 ADSEPES(1)PLNASYVYK 226.67 6.3303e-55 11025000.0 2722.7 3463.8 2739.3 2589.6 3548.3 2818.0 2726.5 2527.2 3215.5 2899.9 3154.3 True False 2999.1064996541954 3755.7065822071568 2925.2053707490572 2749.5537105916865 3299.0796489704644 2795.051142304921 2830.2584494980465 2476.793013449954 3080.363717202459 2716.799819099971 2766.341096755158 1.0841419748172287 1.3576440687710192 1.0574275797660102 0.993931555951953 1.1925787650843904 1.0103783461784372 1.0231053765632379 0.8953317493476 1.1135155100054874 0.9820914066912075 1.0 11.433763340014337 -5.8831739434441275 9.608296328899472 1.044197274167366 1.2203895422016007 0.37598085339569554 0.09357956050003814 0.20717145461067696 16.438611051109675 0.012060100353859004 0.03762473117905407 1.3086576749963401e-06 5.8831739434441275 0.1761922680342347 ADSGPTQPPLS(ph)LSPAPETK ddPTM_A549_MK2206_60min_R1 1 ADSGPTQPPLSLSPAPETK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 ADSGPTQPPLS(0.702)LS(0.298)PAPETK 144.68 1.1665e-20 40596000.0 1634.5 2086.9 1993.0 1581.5 1827.8 1694.9 1720.1 1459.9 2580.7 2384.9 2365.9 True False 1910.3636403116886 2193.114296129403 2275.6373685164003 1968.9675709962337 1558.9330412720192 1874.2531930164355 2032.61990466496 1666.8452957562401 1996.1755705310675 1846.1494336150156 1778.3817344818076 1.074214609423178 1.2332078392429295 1.2796113030139085 1.107168125278772 0.8766020315240517 1.0539093810264326 1.142960403412619 0.9372820601095144 1.1224674274518016 1.0381063850461523 1.0 10.796349320490144 -6.516596661235451 24.99945268682058 1.0436036548997776 1.198424059828406 0.42631762750340885 0.08557402741538407 219.63674341975226 874038.7064756728 0.01239398194607286 0.026534251923659342 3.0437104737966246e-07 6.516596661235451 0.15482040492862836 ADSGPTQPPLSLS(ph)PAPETK ddPTM_A549_MK2206_60min_R1 3 ADSGPTQPPLSLSPAPETK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 ADSGPTQPPLS(0.005)LS(0.994)PAPET(0.001)K;ADSGPTQPPLS(0.04)LS(0.959)PAPETK;ADSGPTQPPLS(0.172)LS(0.827)PAPETK 177.12 1.6349000000000002e-34 47655600.0 4635.1 4970.1 4889.5 4338.5 7080.4 4478.799999999999 3751.1 4751.1 6756.5 6767.1 7655.1 True False 5417.39156268504 5223.056860986506 5582.904622860484 5401.432694762669 6038.882539349162 4952.743643213173 4432.626314975137 5424.5829746335185 5226.163537913419 5238.40741004494 5754.127399988031 0.9414792523878266 0.9077061555844887 0.9702434852019607 0.93870578791389 1.0494871106541233 0.8607288818845885 0.7703385773113672 0.9427290356214222 0.9082460596761012 0.910373901359194 1.0 12.490381448265566 -10.708355194785614 0.9864363687621982 0.9995494702808442 0.9206283387380235 0.0 0.07016798698129105 0.8249379824339518 1.4382600816987292 0.04487075666557801 0.011944493368199763 1.9572432555823866e-11 10.708355194785614 -0.07892113154282066 ADSGPTQPPLSLS(ph)PAPETK ddPTM_A549_PD325901_60min_R1 5 ADSGPTQPPLSLSPAPETK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 ADSGPTQPPLS(0.083)LS(0.917)PAPETK;ADSGPTQPPLS(0.01)LS(0.988)PAPET(0.002)K;ADSGPTQPPLS(0.027)LS(0.973)PAPETK;ADSGPTQPPLS(0.041)LS(0.959)PAPETK;ADSGPTQPPLS(0.007)LS(0.993)PAPETK 216.3 1.8503999999999997e-66 165118200.0 14961.4 15842.999999999998 14704.9 15417.5 17257.8 15986.7 15241.0 16646.399999999998 18478.7 18838.4 20826.0 True False 16480.270313999445 17178.14521101333 15702.862941747102 16369.803959317009 16045.671664177906 15856.509615573501 15821.004595195207 16314.374493151825 17702.104500410223 17648.94020901854 18264.534026891193 0.9023099242354201 0.9405192153121259 0.8597461571495612 0.896261789937562 0.8785152493106905 0.8681584535487018 0.8662145210987406 0.8932269757953795 0.969206467263118 0.9662956735186179 1.0 14.156757327026076 -8.820044470315157 2.955967915933912 0.9873635666052412 0.8867402917611702 0.7661202155870571 0.022274552553139496 0.0791839688329207 1.346227945517602 0.004196648372593203 0.004476035658467947 1.5134062727168211e-09 8.820044470315157 -0.10062327484407096 ADSRES(ph)LKPAAKPLPSK ddPTM_A549_MK2206_60min_R1 1 ADSRESLKPAAKPLPSK 17 3 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ADS(0.099)RES(0.901)LKPAAKPLPSK 45.047 0.01285 505630000.0 3393.5 3922.6 4405.3 3884.0 4599.7 3646.6 3468.8 3365.7 5783.0 6304.6 7011.4 True False 3966.239836890618 4122.243585220751 5030.03778199965 4835.580174359383 3923.090223185743 4032.4807915828264 4099.036059125522 3842.798282023959 4473.159733553365 4880.386481265138 5270.275875204255 0.7525677840795957 0.7821684638208791 0.9544164102803644 0.9175193649937681 0.7443804301864368 0.7651365672440332 0.7777649891935989 0.7291455652452022 0.8487524826923797 0.926021065467658 1.0 12.363662767088533 -10.069304150420422 0.8413053325897927 0.9883924536676082 0.8087542370256526 0.4031917771057566 0.07138146953752858 0.3636904318221318 0.5153561342485443 0.03371540067396003 0.015045451170305977 8.525028696765068e-11 10.069304150420422 -0.17963821664195556 ADSRES(ph)LKPAAKPLPSK ddPTM_A549_PD325901_60min_R1 1 ADSRESLKPAAKPLPSK 17 3 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ADS(0.443)RES(0.557)LKPAAKPLPSK 46.361999999999995 0.007932300000000002 7101200.0 1259.6 1667.6 1697.6 1489.3 2459.8 1856.8 1853.1 2115.8 2545.5 2136.9 1618.1 True False 1387.4736647314899 1808.1345044427096 1812.8093444980836 1581.2906785542946 2287.0321338493213 1841.6788364200781 1923.6207345552295 2073.59870918701 2438.5214872146967 2001.9757693143652 1419.0839579810174 0.9777248604131212 1.2741561161858306 1.2774503822009473 1.1143038223080575 1.611625669493978 1.2977941340696304 1.355536946025403 1.4612234163630422 1.7183771781086654 1.410752167308444 1.0 10.47074423148104 -4.454602086792618 0.8183342962537394 1.3610211384156274 5.6256255592707516e-11 0.2634376055212547 0.1900519442389383 11.956707318064067 2.2412648996424083 0.04147964980990892 20.23791456615928 3.510733902669673e-05 4.454602086792618 -1.361021138359371 ADSRESLKPAAKPLPSK ddPTM_A549_MK2206_60min_R1 1 ADSRESLKPAAKPLPSK 17 3 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 55.688 0.0030186999999999996 24982000.0 3113.9 3959.4 4149.8 4132.0 5410.8 4682.0 3702.8 3765.9 6497.7 7236.2 7200.6 False True 3639.450192454305 4160.916548035245 4738.304040074941 5144.34018549253 4614.878487643418 5177.44613233993 4375.55083018046 4299.727857585057 5025.981324694743 5601.537394240834 5412.492293549903 0.672416697348735 0.768761657729071 0.8754384825123178 0.9504568148065667 0.8526346528276807 0.956573395681306 0.808417008814004 0.7944081255707406 0.9285890957635604 1.034927551013092 1.0 12.402077350355444 -2.0000000000000004 0.12000384147463991 1.0413019282849056 0.12672717146453444 0.5402742116015549 0.07086185937767915 52.319073655956004 0.4160364051491221 0.2649777127361218 8.050836261819464 0.00999999999999999 2.0000000000000004 -0.9145747568203713 ADSRESLKPAAKPLPSK ddPTM_A549_PD325901_60min_R1 1 ADSRESLKPAAKPLPSK 17 3 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 69.52199999999999 0.00041805 20214000.0 6380.8 5684.4 6459.9 5205.0 7510.2 7517.1 6994.1 7306.8 7440.6 7605.1 7730.9 False True 7028.574118703311 6163.444337403538 6898.307660534384 5526.501028587325 6982.709460783471 7455.883229886566 7260.264302818371 7161.060141926285 7127.897457383489 7124.912688105518 6780.048310212869 1.0366554627813027 0.9090561092491726 1.017442257770255 0.8151123378077837 1.029890812173909 1.0996799563589656 1.0708278128169304 1.0561960349367265 1.0513048183811096 1.0508645900609845 1.0 12.727079837766512 -6.9572449781135255 24.999833038741954 1.0372039845377994 0.9441436752347898 0.4149466902396709 0.05952495684540398 116.38774770230096 68054.07901453598 0.008288408996927312 0.01566361200149614 1.103456003594704e-07 6.9572449781135255 -0.09306030930300957 ADT(ph)LGELDLER ddPTM_A549_MK2206_60min_R1 2 ADTLGELDLER 11 0 G3V4F2;A0A087X0W7;A0A087WT95;Q86TX2;P49753 G3V4F2 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial 1 ADT(1)LGELDLER;ADT(1)LGELDLER 68.069 0.019996 782930.0 154.89 144.54 89.854 112.79 313.52 155.54 190.34 155.75 277.88 209.96 202.9 True False 181.03164530307575 151.89646861974396 102.596648324472 140.42355506333556 267.4016233174328 171.99913956090407 224.92231419913284 177.82803946437056 214.94062368317626 162.52989017644708 152.51433024487886 1.1869812168627638 0.995948829043521 0.6727016940620699 0.920723677820109 1.753288513204559 1.1277572362199682 1.4747618393497506 1.1659759393025408 1.4093142810781452 1.0656696319322068 1.0 7.252800994430042 ADT(ph)LGELDLER ddPTM_A549_PD325901_60min_R1 2 ADTLGELDLER 11 0 G3V4F2;A0A087X0W7;A0A087WT95;Q86TX2;P49753 G3V4F2 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial 1 ADT(1)LGELDLER;ADT(1)LGELDLER 76.655 0.0012835000000000001 1913610.0 416.07000000000005 497.49 534.09 514.63 498.18999999999994 482.43 557.63 630.74 749.69 477.9 455.85 True False 458.30912010545467 539.4152282413069 570.3365591440752 546.4175262904695 463.1988530621976 478.5012500291569 578.8509147968447 618.1593958940418 718.1831364172016 447.72531244107563 399.78333987123557 1.146393744804547 1.349268902538672 1.4266141238596195 1.3667841347927672 1.1586247020983598 1.1969014271161855 1.44791154874859 1.546236008967112 1.7964308784065839 1.1199198860694932 1.0 8.643074541832362 -7.774796338732482 24.794134282626903 1.4060098762802071 1.2834114890835548 0.05440710560567752 0.2119528260447281 660.1557126674967 1225424.79047303 0.04687775153833914 0.06497319675081462 1.6795914735227787e-08 7.774796338732482 -0.12259838719665228 ADT(ph)PGPEDGGVK ddPTM_A549_MK2206_60min_R1 2 ADTPGPEDGGVK 12 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ADT(1)PGPEDGGVK;ADT(1)PGPEDGGVK 143.42 3.5503e-21 8816700.0 2540.8 2981.5 2053.5 2140.6 3353.0 2290.9 2383.4 2488.0 3081.6 2981.8 2903.5 True False 2969.62492340406 3133.2456149838576 2344.717178248084 2665.0470960951866 2859.7781416922403 2533.3215174236548 2816.432928770691 2840.6816191804432 2383.622520304002 2308.20930904996 2182.480817476617 1.360664845080993 1.4356348930509795 1.074335755655825 1.221109058441353 1.3103336894382027 1.1607531654517262 1.2904731653160868 1.30158377403969 1.0921619568047085 1.057608062607721 1.0 11.091753258263434 -8.90775391109035 3.1304933393746155 1.0373941241915683 1.2653810939173897 0.5270813254443919 0.09289065266415623 0.13819313838651462 2.579630149927579 0.01742888050841146 0.018150136738893038 1.2366479699651272e-09 8.90775391109035 0.22798696972582144 ADT(ph)PGPEDGGVK ddPTM_A549_PD325901_60min_R1 2 ADTPGPEDGGVK 12 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ADT(1)PGPEDGGVK;ADT(1)PGPEDGGVK 170.66 3.5394999999999996e-16 8395900.0 5074.5 5729.5 4642.0 5020.4 5627.3 5878.6 5225.6 5259.8 5141.0 6431.5 6368.8 True False 5589.659504350544 6212.345072682002 4957.034034613634 5330.498705844337 5232.057861131104 5830.726630643619 5424.463067558045 5154.8891627667235 4924.941648309081 6025.413992393342 5585.47797514956 1.0007486430381765 1.1122315942022234 0.8874860945953155 0.9543496061680566 0.9367251799056655 1.0439082665056059 0.9711725821303228 0.9229092274110513 0.8817404115137 1.078764256022691 1.0 12.44746502873185 -8.010530973554388 23.659001809180587 0.941288969497164 0.9880092227570286 0.0 0.07312281127076561 484.8085802273537 1089180.710095361 0.010805636450415927 0.01442817885551072 9.76043169286322e-09 8.010530973554388 0.04672025325986462 ADT(ph)SQEICSPR ddPTM_A549_PD325901_60min_R1 1 ADTSQEICSPR 11 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADT(0.617)S(0.383)QEICSPR 160.18 2.421e-13 11383000.0 1291.6 1737.0 1348.2 1484.5 1469.2 860.74 1345.9 1269.7 1013.1 1398.2 1434.3 True False 1422.7222811743345 1883.383086002029 1439.6969593852004 1576.1941934558854 1366.0084604648446 853.7304188174378 1397.11896100474 1244.3748374396193 970.5229301501518 1309.917413381696 1257.8901927768195 1.1310385352744063 1.4972555607929658 1.1445330980815096 1.2530459355728047 1.0859520714199637 0.6787002742527228 1.1106843578457115 0.9892555364412495 0.7715482128115664 1.0413607013582205 1.0 10.296790272657763 -6.956667165634767 3.872926172897435 0.9015806614665633 1.2636212312036454 0.5095984607738122 0.14647837184064477 0.1225155050750077 3.918222198547081 0.021116669528280882 0.04059397639709968 1.1049250873813556e-07 6.956667165634767 0.3620405697370821 ADTLDPALLRPGR ddPTM_A549_PD325901_60min_R1 2 ADTLDPALLRPGR 13 1 P43686-2;P43686 P43686-2 PSMC4 26S protease regulatory subunit 6B 0 ; 51.218 0.026919 3707200.0 1635.7 1452.73 994.79 963.31 1211.25 1214.6399999999999 1148.08 949.6 1382.33 1414.58 1649.45 False True 1801.7550598613034 1575.1566554563785 1062.3024315582288 1022.8114708642566 1126.1759785856539 1204.7483745526085 1191.7708126534812 930.6594830532111 1324.235477282064 1325.2631773862677 1446.5781067250405 1.2455290533467014 1.08888462236058 0.7343553912641558 0.7070558209814441 0.778510315723804 0.832826356870616 0.8238551427766133 0.6433523905322777 0.915426184819047 0.9161366200865421 1.0 10.49842850709495 -5.560551765050919 5.4310649417900265 0.8805772515093574 1.2120052982012517 0.5521094914947423 0.11361138189659145 0.11829165189368704 8.701180909710926 0.019444520780333027 0.08315520719615327 2.75073171628878e-06 5.560551765050919 0.3314280466918943 ADTS(ph)QEICSPR ddPTM_A549_MK2206_60min_R1 2 ADTSQEICSPR 11 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADT(0.032)S(0.968)QEICSPR;ADT(0.025)S(0.975)QEICSPR 158.11 2.9202e-13 18379800.0 2044.1299999999999 2419.0 2066.92 1655.51 3015.0 2397.5 2146.1 1943.49 3452.8999999999996 3095.8 3240.1 True False 2389.129169819718 2542.116767615612 2360.0403360431123 2061.110024318669 2571.49749394635 2651.2018586683002 2536.0185904316436 2218.985659188504 2670.8236631482637 2396.4566298735217 2435.4937477892154 0.9809629657183131 1.0437788107332167 0.9690192545907397 0.8462801541533875 1.0558423712976435 1.088568534029246 1.0412749335668294 0.9111029996290307 1.0966251363086708 0.9839715794995865 1.0 11.24999856427031 ADTS(ph)QEICSPR ddPTM_A549_PD325901_60min_R1 1 ADTSQEICSPR 11 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADT(0.022)S(0.978)QEICSPR 125.53 2.9628e-06 12403000.0 1113.4 1426.3 1234.4 1415.7 1043.2 1180.9 996.54 1283.2 689.42 1020.0 1352.0 True False 1226.4315483582418 1546.4993066002844 1318.173807050209 1503.1445737120207 969.9292308446267 1171.2831419261465 1034.4638750276122 1257.605569349074 660.4460749226306 955.5970259257115 1185.712571034135 1.0343413558385346 1.3042784097763966 1.1117144569872834 1.2677141243438392 0.8180137872694476 0.987830584358734 0.8724406743241246 1.060632736863232 0.5570035192817546 0.8059263680507956 1.0 10.211538612758458 -7.058481446662612 0.9742216359006594 0.810976807288317 1.1940647832185047 0.4123817626967762 0.1571142339959032 0.4203150153221476 0.7774315930052557 0.03240916417624427 0.0862101667465979 8.740143302429309e-08 7.058481446662612 0.38308797593018773 ADTSQEICS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ADTSQEICSPR 11 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADT(0.01)S(0.009)QEICS(0.982)PR;ADT(0.001)S(0.007)QEICS(0.993)PR 64.878 0.005973399999999999 7374600.0 1642.83 1680.37 1073.69 883.14 1573.77 1138.65 1450.8400000000001 1106.25 1644.57 1816.44 1891.11 True False 1920.0995406627403 1765.893655559424 1225.9553869555314 1099.5093396456607 1342.2705177605128 1259.1411872253022 1714.4388480228542 1263.0643252485384 1272.0775208386397 1406.104942427632 1421.4951950191858 1.350760486135041 1.2422790184215782 0.8624407534061237 0.7734879044953935 0.9442666584197609 0.8857864533325474 1.206081352951541 0.8885463205744364 0.8948869650041065 0.9891731940807961 1.0 10.473193507044599 -5.655878580827627 4.859961654217057 0.9417141894724647 1.3232808773487506 0.6392894585213044 0.10466060089220056 0.09163854609407011 3.4534317452834284 0.014342414439827427 0.0594837117018729 2.2086221288149504e-06 5.655878580827627 0.3815666878762859 ADTSQEICS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ADTSQEICSPR 11 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADTSQEICS(1)PR;ADT(0.005)S(0.056)QEICS(0.939)PR 75.08800000000001 0.0013507 9100900.0 2779.3 2658.1000000000004 2343.3 2059.1000000000004 2687.2 2580.7 2121.16 2752.4 1894.11 2488.0 2657.1000000000004 True False 3061.452489987478 2882.1074156027635 2502.330429407612 2186.2859304446033 2498.460342336733 2559.6836348283578 2201.8819045432906 2697.501222783971 1814.5071436449534 2330.9072553952647 2330.293544744675 1.3137625930826302 1.2368001542563385 1.0738262718235299 0.9382019425729259 1.0721654994802312 1.0984382807054536 0.9448946505083101 1.1575800091226405 0.7786603313291008 1.000263361949388 1.0 11.186295985838916 -2.0000000001020495 0.3269035697274687 0.9123579181350381 5.233411049609523 0.46226158155766583 0.10398983798853927 28.622427576622602 0.3564399447753117 0.03447634343420177 75.7077441461942 0.009999999997650224 2.0000000001020495 4.321053131474485 ADTSS(ph)QGALVFLSK ddPTM_A549_MK2206_60min_R1 1 ADTSSQGALVFLSK 14 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 ADT(0.018)S(0.337)S(0.644)QGALVFLSK 82.55 0.00037141 1398700.0 981.19 1351.8 1112.3 1195.2 1771.6 1060.3 1317.4 1270.3 1559.3 1509.8 1838.0 True False 1146.7908842076629 1420.6008459953648 1270.0408655297513 1488.0240536545662 1510.9999868243299 1172.500242229823 1556.7545272981902 1450.3689151305923 1206.1210396904303 1168.7351313983606 1381.5738737806184 0.8300612120505132 1.028248197910656 0.919271049947071 1.0770499369553446 1.0936801972735213 0.8486699585750892 1.1267978910445067 1.0497946889815737 0.8730051013413644 0.8459447254891744 1.0 10.43209699084978 -8.750951857015036 24.997467436746554 0.9400301832148189 1.0004812133258505 0.11564962063503847 0.09969640393534518 435.5276828273035 1038097.9597423885 0.01634951705223388 0.018442898963525554 1.7743861665849944e-09 8.750951857015036 0.06045103011103159 ADVEAS(ph)PGNPPDR ddPTM_A549_MK2206_60min_R1 2 ADVEASPGNPPDR 13 0 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 ADVEAS(1)PGNPPDR;ADVEAS(1)PGNPPDR 114.31 2.0186e-05 37726000.0 4551.200000000001 4703.8 5230.299999999999 5007.8 5064.200000000001 3912.0 3372.0 3983.7 5004.0 7647.1 7821.4 True False 5319.331293843104 4943.203328445769 5972.035187431674 6234.711224808684 4319.2628885051745 4325.965243424564 3984.6487521250187 4548.401674569587 3870.601989745987 5919.614798858393 5879.130520341526 0.9047819699594112 0.8408051686116695 1.0158024501699192 1.0604818524162485 0.7346771556713565 0.7358171805264264 0.677761573473886 0.7736521002267807 0.6583629971054187 1.0068860996327254 1.0 12.521387091637905 -6.771004541321713 24.999362391087857 0.8039132476188265 0.9515872906604672 0.284669750276743 0.11967328586559135 256.81920414802295 671220.0650380555 0.021074913645263874 0.04019157333610126 1.6943200832228792e-07 6.771004541321713 0.14767404304164067 ADVEAS(ph)PGNPPDR ddPTM_A549_PD325901_60min_R1 2 ADVEASPGNPPDR 13 0 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 ADVEAS(1)PGNPPDR;ADVEAS(1)PGNPPDR 114.21 2.0345999999999998e-05 56281000.0 6270.1 6152.9 6203.799999999999 6030.200000000001 6863.1 6415.3 6147.6 5921.4 6245.7 6890.6 6289.8 True False 6906.635936196346 6671.426476604423 6624.82717447998 6402.67175842215 6381.059532409661 6363.055923785938 6381.550282095797 5803.29303175156 5983.214949006811 6455.5263400428485 5516.1944743273 1.252065344748131 1.2094255392288367 1.2009778127497723 1.1607045016669677 1.15678654226342 1.1535227688943859 1.1568755075253265 1.0520464894340535 1.084663526069114 1.1702862127300362 1.0 12.429457604857308 -2.000000019611401 0.08050619538662541 0.8604180702572283 1.9067182674057335 0.38458858684349484 0.054602660028643266 25.35967423965868 0.1444631349788116 0.27627270476696725 2.9535152977083916 0.009999999548430815 2.000000019611401 1.046300197148505 ADVEASPGNPPDRQNS(ph)K ddPTM_A549_PD325901_60min_R1 2 ADVEASPGNPPDRQNSK 17 1 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 ADVEASPGNPPDRQNS(1)K;ADVEASPGNPPDRQNS(1)K 109.05 2.0615e-09 35619000.0 7802.1 7661.9 8769.8 8742.4 10558.900000000001 10049.7 9049.2 9207.4 9005.2 9593.2 10060.3 True False 8594.163448397549 8307.595202440385 9364.971365091484 9282.398192569031 9817.2792902275 9967.858575167422 9393.572257912243 9023.75118393443 8626.742760426558 8987.483714814247 8822.946877496091 0.9740694994229104 0.9415896205416165 1.0614334978008182 1.0520745870344999 1.1126984471897439 1.1297652262410822 1.064675146335925 1.022759323979442 0.9777620652380925 1.0186487394294332 1.0 13.107044883242622 -8.547095884063532 4.293564127875315 0.9896472408046586 1.0500436941332902 0.1430444367686884 0.05159136085092268 0.2585155591051774 11.163734034897756 0.009549893854762289 0.011047989242474144 2.8372925383905683e-09 8.547095884063532 0.06039645332863164 ADVEASPGNPPDRQNS(ph)KLAK ddPTM_A549_PD325901_60min_R1 1 ADVEASPGNPPDRQNSKLAK 20 2 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 ADVEAS(0.125)PGNPPDRQNS(0.875)KLAK 66.613 0.00030495 37524000.0 13551.0 15911.0 19194.0 20563.0 20751.0 22146.0 19269.0 22219.0 17960.0 20013.0 30455.0 True False 14926.687544281049 17251.87580965936 20496.620262898345 21833.129808038648 19293.521347063688 21965.65031848291 20002.29233940139 21775.824614531688 17205.203657582395 18749.37576456006 26709.228070151326 0.5588588148289558 0.6459144294379308 0.7673984515413297 0.8174376942191781 0.7223541352969688 0.8223992943858395 0.7488906937656795 0.8152921738261346 0.6441670127041195 0.7019811922424395 1.0 14.705050660447313 -10.896167104481624 1.0305711047092159 1.007499125370463 0.7273858992818678 0.0 0.11733668817575788 0.31493978970440617 0.5670725962219334 0.06697593947052774 0.014343727216375113 1.2700853175445556e-11 10.896167104481624 -0.28011322608859524 ADVGRLS(ph)PEVK ddPTM_A549_MK2206_60min_R1 2 ADVGRLSPEVK 11 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 ADVGRLS(1)PEVK;ADVGRLS(1)PEVK 94.53200000000001 8.0124e-05 59452000.0 6467.1 6288.5 6382.6 5365.9 7742.799999999999 6547.5 6699.6 7494.6 7884.799999999999 7753.799999999999 8006.9 True False 7558.588374585328 6608.557789644807 7287.7486544369185 6680.5457408844 6603.844376825137 7240.3521041212525 7916.830598972944 8556.982501249897 6098.905389438275 6002.211194752026 6018.565750801976 1.2558786740143437 1.0980286771419276 1.2108779659781608 1.1099896582494286 1.0972455316194183 1.2030029086508647 1.3154015303260622 1.4217643962948607 1.0133486352002707 0.9972826489354594 1.0 12.555204012389025 -8.943500073171416 24.999989969038484 1.0058886101705744 1.2064449162546538 0.5064143671344719 0.09234331184714022 52.00334907828454 23010.292983452407 0.01672153728086347 0.017800845584424508 1.1389375899836005e-09 8.943500073171416 0.20055630608407937 ADVGRLS(ph)PEVK ddPTM_A549_PD325901_60min_R1 3 ADVGRLSPEVK 11 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 ADVGRLS(1)PEVK;ADVGRLS(1)PEVK;ADVGRLS(1)PEVK 114.64 6.2520000000000004e-06 104345200.0 10373.8 10808.9 8723.2 10585.400000000001 12823.4 9744.4 9335.7 10611.3 10220.800000000001 11038.3 12227.099999999999 True False 11426.940539212072 11719.803936837847 9315.208808862915 11239.236116812344 11922.728622328403 9665.044837145519 9690.975172191065 10399.649297096184 9791.25531978943 10341.339854191936 10723.24421397299 1.0656234541709053 1.0929345357598295 0.8686931513435714 1.048119010678409 1.1118583503668056 0.9013172361169787 0.9037353788476793 0.9698230395186614 0.9130870401171013 0.9643853714267356 1.0 13.388453824835095 -7.275320702368071 24.969197090080687 0.9507031697767163 1.031746237771834 0.3389407234984123 0.06550980110450345 859.0565708279695 1545234.944970542 0.010305545128045436 0.016520617539655932 5.3049256024734556e-08 7.275320702368071 0.08104306799511773 ADVLEAHEAEAEEPEAGKS(ph)EAEDDEDEVDDLPSSR ddPTM_A549_MK2206_60min_R1 2 ADVLEAHEAEAEEPEAGKSEAEDDEDEVDDLPSSR 35 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 ADVLEAHEAEAEEPEAGKS(1)EAEDDEDEVDDLPSSR;ADVLEAHEAEAEEPEAGKS(1)EAEDDEDEVDDLPSSR 233.8 1.1779999999999997e-116 149949000.0 1735.2199999999998 2151.42 2318.5 2194.5299999999997 3030.4 2155.75 2485.6 2229.4 3805.6 3163.6 3480.3 True False 2028.0827139441094 2260.9180885422015 2647.298163023218 2732.189948516194 2584.6321743466065 2383.870034128964 2937.201345872463 2545.424277251158 2943.6376762944274 2448.9405627843757 2616.0454586064643 0.7752475046914683 0.8642503061650026 1.0119465448560674 1.0443969692986903 0.9879920724785145 0.9112494686536612 1.1227638786663419 0.9730046046703923 1.1252242068692748 0.9361230917175639 1.0 11.353171895198502 -4.291219075575165 0.6127142148394895 1.0496942490111045 2.3446570832162907e-12 0.4917645197822701 0.07098377758025964 4.5758657191707135 0.4910616576949143 0.011537298803326808 4.468139113128987 5.114237877668878e-05 4.291219075575165 -1.04969424900876 ADVLEAHEAEAEEPEAGKS(ph)EAEDDEDEVDDLPSSR ddPTM_A549_PD325901_60min_R1 2 ADVLEAHEAEAEEPEAGKSEAEDDEDEVDDLPSSR 35 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 ADVLEAHEAEAEEPEAGKS(1)EAEDDEDEVDDLPSSR;ADVLEAHEAEAEEPEAGKS(1)EAEDDEDEVDDLPSSR 386.12 0.0 250110000.0 4564.1 4927.0 5342.9 5783.5 6500.0 5558.8 6223.6 6226.7 6054.8 5295.6 5662.0 True False 5027.444072087163 5342.215581308002 5705.501323467727 6140.733659718501 6043.462423782663 5513.530975814267 6460.442503684598 6102.50358374835 5800.33781213418 4961.234912247249 4965.609894375204 1.0124524839903355 1.0758427856685637 1.1490031325116046 1.236652453644097 1.21706347303448 1.110343158865484 1.301037061127711 1.2289534847795762 1.1681017912229703 0.9991189436502229 1.0 12.277755210382022 -10.469541777022481 0.9014610334769599 1.004579126781139 1.1696245651774948 0.4043335959111255 0.07737296411715804 0.4659522151808352 0.7065282592080255 0.04678578934237262 0.015143422156791894 3.392018583986136e-11 10.469541777022481 0.16504543839635577 ADVPVEKYDGES(ph)DKEQFDDDQK ddPTM_A549_MK2206_60min_R1 1 ADVPVEKYDGESDKEQFDDDQK 22 2 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 ADVPVEKY(0.01)DGES(0.99)DKEQFDDDQK 72.035 0.00011563 4734500.0 1099.7 1360.1 1091.2 1339.3 1249.3 1233.5 1133.5 1580.5 1645.5 1625.7 1907.6 True False 1285.3024749163426 1429.3232805431983 1245.948568251428 1667.4285601234608 1065.5296249377031 1364.0281512689671 1339.4422777383477 1804.54071507825 1272.796877323545 1258.4532409023138 1433.890272918339 0.8963743594552869 0.9968149638355203 0.8689288098144352 1.1628704034164419 0.7431040192281058 0.9512779164704254 0.934131643847639 1.2584928910951751 0.8876529127525727 0.8776496114594842 1.0 10.48571891206774 ADVPVEKYDGES(ph)DKEQFDDDQK ddPTM_A549_PD325901_60min_R1 1 ADVPVEKYDGESDKEQFDDDQK 22 2 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 ADVPVEKYDGES(1)DKEQFDDDQK 123.53 6.612499999999999e-16 6898000.0 1835.6 1843.6 1770.0 1910.4 2363.8 2017.1 2250.0 2196.9 2590.8 2359.7 2554.9 True False 2021.9487607027004 1998.9666421147626 1890.1228438746525 2028.4010691668045 2197.774842667301 2000.6734063673746 2335.6249812472424 2153.08110606529 2481.917685749691 2210.7081392910786 2240.6634968454982 0.9023884057330724 0.892131569478859 0.8435549767002712 0.9052680476218201 0.9808589490396137 0.8928932921806456 1.0423809664125983 0.9609122963338714 1.107670870366675 0.9866310324613259 1.0 11.129710285636898 -7.640651906751281 0.9807571667191803 1.0482039339020135 0.8870646541145724 0.5395361845236167 0.05017257943011724 0.2471175848999738 0.47854685890675286 0.009637877692924771 0.017715785216405423 2.287431477917953e-08 7.640651906751281 -0.16113927978744114 ADVQLFMDDDS(ph)Y(ph)SHHSGLEYADPEK ddPTM_A549_PD325901_60min_R1 2 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.828)Y(0.444)S(0.402)HHS(0.325)GLEY(0.001)ADPEK;ADVQLFMDDDS(0.523)Y(0.534)S(0.488)HHS(0.443)GLEY(0.012)ADPEK 81.242 7.6036e-06 75545000.0 1667.4499999999998 1840.4 1792.5900000000001 1821.9 1805.47 1907.7199999999998 1523.55 1989.39 1714.96 1532.6 2216.34 True False 1836.7282964881877 1995.4969668843619 1914.2459371193572 1934.4346251648872 1678.6600157333655 1892.1841608225495 1581.5295289685496 1949.7100558037355 1642.8861951340482 1435.831374444847 1943.7442305368318 0.9449434074877804 1.0266252810089302 0.9848239840643398 0.9952104781968287 0.8636218641121038 0.973473840382774 0.8136510473560381 1.0030692439741704 0.8452172715544517 0.7386935749505956 1.0 10.924622677673428 -6.7237547322920985 24.951923600015284 0.9224144675282804 0.9904471310476821 0.1873671254944942 0.0817781681047881 221.89447574988966 146920.67490614607 0.009696592396290983 0.0201846856811205 1.8890578929095326e-07 6.7237547322920985 0.06803266351940174 ADVQLFMDDDS(ph)YS(ph)HHSGLEYADPEK ddPTM_A549_MK2206_60min_R1 1 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.478)Y(0.45)S(0.478)HHS(0.478)GLEY(0.117)ADPEK 48.867 0.0039732 3662600.0 317.03 367.89 439.32 239.06 607.53 451.13 505.81 421.73 624.09 541.41 737.16 True False 370.5369133606697 386.6140296147613 501.6221820053312 297.62971073181114 518.1631417901244 498.86827716414217 597.7091296893109 481.51151899395785 482.7346114669405 419.10510497442476 554.1028274189989 0.6687150742157806 0.6977297542689009 0.9052871726749318 0.5371380473154505 0.9351389600441475 0.9003171477898095 1.0786971300497226 0.8689930734279591 0.8712004118721244 0.75636702112965 1.0 9.114009918471098 -6.8480243178471865 11.908657236008686 0.9401151624917138 0.7164780793200897 0.4455059482704191 0.11217022431492779 0.29523004685630216 38.990917774774495 0.013858102532690101 0.02619963433292567 1.4189780653310533e-07 6.8480243178471865 -0.22363708317162412 ADVQLFMDDDSY(ph)SHHS(ph)GLEYADPEK ddPTM_A549_MK2206_60min_R1 1 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.349)Y(0.407)S(0.378)HHS(0.826)GLEY(0.04)ADPEK 49.199 0.0030695 2435200.0 1080.4 1091.7 1437.6 1132.6 2244.1 1396.1 1353.2 1316.4 2234.7 1656.0 1801.3 True False 1262.7451067560403 1147.2628669722876 1641.4732970291918 1410.087050844346 1913.9958627412936 1543.834375343822 1599.0589238954838 1503.0037313059229 1728.5440180826042 1281.9084498580498 1353.987496649089 0.93261208828083 0.8473216110278616 1.2123252992303002 1.0414328450846813 1.4135993629764967 1.1402131697409132 1.1809997713072748 1.1100573196027483 1.276632186309316 0.9467653527307868 1.0 10.402998701118836 -5.759189775573978 24.999978011411155 1.152692756447352 0.8899667757573004 0.3857740857630534 0.1248640421105929 42.35911998179011 470705.8162820328 0.01721964377351517 0.06084552288358664 1.7410459146367232e-06 5.759189775573978 -0.2627259806900515 ADVQLFMDDDSY(ph)SHHS(ph)GLEYADPEK ddPTM_A549_PD325901_60min_R1 1 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.363)Y(0.489)S(0.413)HHS(0.734)GLEY(0.001)ADPEK 82.492 4.0356e-07 64898000.0 1843.4 2342.0 1933.8 1917.6 2200.4 1992.8 1712.9 2517.7 2478.2 2065.9 2299.4 True False 2030.5406109606436 2539.368559249716 2065.0392968840692 2036.0457968144192 2045.851494967902 1976.571297510735 1778.0853468348446 2467.4824984025586 2374.0498721726417 1935.4587214312992 2016.5883770975518 1.0069187316665849 1.2592399064129263 1.024026182207919 1.0096486818717423 1.0145112003037864 0.9801560496721632 0.8817294431667898 1.223592541951458 1.1772605154005595 0.9597688568536622 1.0 10.977700917981602 -8.274050334875673 24.941035647448892 1.0965366650227466 1.0313950937369207 0.07401728168131605 0.10830687914945773 1686.8896114286638 3336201.336667307 0.01871173396938482 0.02269687099312246 5.3204659131535484e-09 8.274050334875673 -0.06514157128582587 ADVQLFMDDDSYS(ph)HHS(ph)GLEYADPEK ddPTM_A549_PD325901_60min_R1 4 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.01)Y(0.009)S(0.982)HHS(0.999)GLEYADPEK;ADVQLFMDDDS(0.134)Y(0.041)S(0.826)HHS(0.999)GLEYADPEK;ADVQLFMDDDS(0.133)Y(0.039)S(0.832)HHS(0.996)GLEYADPEK;ADVQLFMDDDS(0.243)Y(0.216)S(0.619)HHS(0.552)GLEY(0.37)ADPEK 120.69 1.1989000000000001e-17 79117000.0 8756.630000000001 9973.99 10237.52 10474.82 10580.980000000001 8463.33 8307.47 9340.400000000001 9619.369999999999 9689.77 9564.28 True False 9645.596631309701 10814.533141020946 10932.299670408831 11121.825841357737 9837.808467199366 8394.407446488118 8623.615316872014 9154.098394597953 9215.101331160255 9077.956268533502 8387.934192966244 1.1499370893250542 1.2892963740809438 1.3033363661312676 1.3259314612510926 1.1728523663727504 1.0007717339422264 1.028097636257495 1.091341227053758 1.0986139279547087 1.0822636491528368 1.0 13.034099827563727 -7.0349117234129785 4.150417511874068 1.0474415073829257 1.2704992068307792 0.7910777897332593 0.052231055158030316 0.07636783948135764 2.91265632386759 0.008437228326244038 0.015469893279360986 9.227589720992652e-08 7.0349117234129785 0.22305769944785347 ADVQLFMDDDSYS(ph)HHS(ph)GLEYADPEKFADSDQDRDPHR ddPTM_A549_PD325901_60min_R1 2 ADVQLFMDDDSYSHHSGLEYADPEKFADSDQDRDPHR 37 2 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.105)Y(0.119)S(0.807)HHS(0.847)GLEY(0.117)ADPEKFADS(0.005)DQDRDPHR;ADVQLFMDDDS(0.189)Y(0.227)S(0.663)HHS(0.807)GLEY(0.113)ADPEKFADSDQDRDPHR 86.822 2.4391e-09 18412200.0 2950.1 2930.8 2432.8999999999996 3019.3 2451.5 3170.5 2139.26 3158.0 3675.7 2841.7 3742.8999999999996 True False 3249.5919802511653 3177.788801643493 2598.011224216181 3205.7953036721806 2279.315097215875 3144.6804991759263 2220.6707099479886 3095.011212596927 3521.223111591069 2662.274577032444 3282.547028197977 0.9899605252678122 0.9680862983364498 0.7914619964005248 0.9766182406934377 0.6943739351290126 0.9580001359195346 0.6765084219271863 0.9428688107161708 1.0727106363877803 0.8110392796090283 1.0 11.680599965045134 -8.52785176928152 11.625587435051012 1.0329647471432624 0.8633233032202042 0.03524929304658975 0.12407365758236459 0.17026430545739854 369.2967877788827 0.016540339600208946 0.01896174246807327 2.965843500232716e-09 8.52785176928152 -0.16964144392305813 ADVTLSALNDSDANSDVVDIEGLGET(ph)PPAK ddPTM_A549_PD325901_60min_R1 2 ADVTLSALNDSDANSDVVDIEGLGETPPAK 30 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 ADVTLSALNDSDANS(0.036)DVVDIEGLGET(0.964)PPAK;ADVTLSALNDSDANS(0.006)DVVDIEGLGET(0.994)PPAK 103.41 2.3074000000000002e-14 5519400.0 1271.07 1423.15 1282.83 1432.8400000000001 1543.15 1465.0 1381.73 1488.0700000000002 1574.27 1703.1599999999999 1500.71 True False 1400.108090687721 1543.0838450453587 1369.8905580834573 1521.3432725842572 1434.764467578495 1453.069525719202 1434.3124912616674 1458.3892764816676 1508.1089065713943 1595.6221869368956 1316.1321837844948 1.0638050705984228 1.172438349321625 1.0408457258026942 1.1559198166628557 1.0901370586143384 1.1040452802703664 1.0897936460586726 1.108087238082817 1.1458643175451244 1.2123570919364166 1.0 10.36208867594928 -10.887479298718244 1.08397558913592 0.9986701134343837 1.1108641112486293 0.0 0.07266372950542963 0.29105434494512167 0.5953712231472686 0.025188427401300686 0.005757913165951858 1.2957484597907411e-11 10.887479298718244 0.11219399781424555 ADVVPQQADPEFPRAS(ph)PR ddPTM_A549_MK2206_60min_R1 4 ADVVPQQADPEFPRASPR 18 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR 211.68 5.3118e-56 215426800.0 11089.659999999998 11802.76 12149.88 10841.05 15238.2 12672.5 12320.800000000001 12261.1 18593.7 16758.4 18275.5 True False 12961.323491843934 12403.470070336034 13872.915680376338 13497.10773667322 12996.680965921483 14013.495538675299 14559.329876981585 13999.148473043932 14382.256638037556 12972.665800785728 13737.188971859456 0.9435207973330733 0.902911803553439 1.0098802388752837 0.982523263261644 0.9460946480786645 1.020113763258397 1.0598478267137679 1.019069367227975 1.0469577631566047 0.9443464618096287 1.0 13.745799196568491 -7.292481135477698 7.976828967575766 1.025491059863004 0.9583401936080791 0.35326244877909707 0.037691285376498025 0.16687988463214068 38.682430742526385 0.004710646583007896 0.007600359241505843 5.099397474322002e-08 7.292481135477698 -0.06715086625492495 ADVVPQQADPEFPRAS(ph)PR ddPTM_A549_PD325901_60min_R1 3 ADVVPQQADPEFPRASPR 18 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR 188.39 1.7887e-40 385040000.0 11362.9 11456.9 12279.9 11796.4 13459.7 12877.8 13342.599999999999 11108.0 11358.5 12609.099999999999 14139.7 True False 12516.45324307514 12422.413170994052 13113.287859037484 12525.03683643179 12514.337105444221 12772.927466420975 13850.35994435087 10886.44222594258 10881.14174524775 11812.959274117524 12400.606538943313 1.0093420191801117 1.001758513342251 1.057471488822425 1.01003421059266 1.0091713712666992 1.0300244126211417 1.1169098786301057 0.8778959474082499 0.8774685101955473 0.9526114095322418 1.0 13.59812306704265 -8.27186883244874 24.997535326351873 0.9357030268810108 1.0312536815234241 0.5708187651700977 0.0441760619098891 536.2476529623033 1285287.5646121413 0.0091866182589248 0.011165143418953673 5.347258352862594e-09 8.27186883244874 0.0955506546424133 ADYDT(ph)LSLR ddPTM_A549_MK2206_60min_R1 2 ADYDTLSLR 9 0 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PQ15;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 ADYDT(1)LSLR;ADYDT(0.997)LS(0.003)LR 177.78 5.7187999999999996e-08 27356000.0 2484.7 3341.6000000000004 2873.1 2854.4 4779.7 3986.3 2971.9 3572.2 4948.9 5246.7 4976.4 True False 2904.0566149173765 3511.673166872397 3280.5487824809193 3553.728128138887 4076.612461630303 4408.127620108218 3511.8557611033048 4078.5702894036885 3827.982051769364 4061.466826008593 3740.6225383470455 0.7763564981888438 0.9387937785415206 0.8770060996131864 0.9500365491860758 1.0898219266549491 1.178447591254727 0.9388425924031268 1.0903453228953648 1.0233542712547847 1.0857729654281896 1.0 11.869062677300501 -6.473133455232592 3.4734171709083808 1.029200645701054 0.8725046105338917 0.5711234669886565 0.07142998290895496 0.1517305029500127 3.6696826409707173 0.009753349481613056 0.023402143286440847 3.364081779390013e-07 6.473133455232592 -0.15669603516716235 ADYDT(ph)LSLR ddPTM_A549_PD325901_60min_R1 2 ADYDTLSLR 9 0 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PQ15;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 ADYDT(0.971)LS(0.029)LR;ADYDT(0.935)LS(0.065)LR 146.11 3.255e-05 37389000.0 6233.0 6676.200000000001 7523.7 7443.0 7376.0 7244.0 7631.9 7905.700000000001 8377.6 9493.900000000001 9608.0 True False 6865.76957150792 7238.826804125934 8034.303525683456 7902.737205720548 6857.935205818604 7185.007265740546 7922.33613083592 7748.014611598326 8025.518605888769 8894.453533760887 8426.276910130162 0.8148046456025931 0.8590777257062769 0.9534820195648365 0.9378682056151978 0.8138748914807107 0.8526906179765648 0.9401941350054139 0.9195062889855398 0.9524394571273113 1.0555615046388849 1.0 13.04067961218191 -8.773128423422756 0.6066791374428453 0.992556041668514 0.8743859084988237 0.5669480434125426 0.047871026931085255 0.4087034051251317 0.3310559915960962 0.014704307871312878 0.01443862021481818 1.6860543755083858e-09 8.773128423422756 -0.11817013316969027 ADYDTLS(ph)LR ddPTM_A549_MK2206_60min_R1 2 ADYDTLSLR 9 0 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PQ15;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 ADYDTLS(1)LR;ADYDTLS(1)LR 177.78 5.3964999999999994e-08 136927000.0 4102.700000000001 4172.9 3385.2 3507.7 7162.200000000001 4323.8 3519.3 4658.2 6722.7 5490.1 6134.8 True False 4795.135458615335 4385.2827861030155 3865.2722628709093 4367.086657466635 6108.649867708971 4781.341646093851 4158.711255442933 5318.514115139198 5200.019183945908 4249.882596959955 4611.3598481334775 1.039852801892319 0.9509738841738906 0.8382066006918634 0.9470279486503931 1.324695983155933 1.0368615340286609 0.9018405399713576 1.1533504845196483 1.1276541747334465 0.9216115716235339 1.0 12.17097653572121 -6.563990520694541 24.99999006141155 1.072440691816715 0.9352743868305978 0.19905484228243853 0.11762818739779599 154.30461533286058 93831.86953775212 0.015760904523091968 0.0328089666981536 2.7290373486035816e-07 6.563990520694541 -0.13716630498611726 ADYDTLS(ph)LR ddPTM_A549_PD325901_60min_R1 2 ADYDTLSLR 9 0 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PQ15;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 ADYDTLS(1)LR;ADYDTLS(1)LR 172.88 1.3891e-07 183237000.0 4700.0 4615.1 5324.9 5088.5 5553.0 4856.9 5888.900000000001 5207.5 4951.6 5391.5 5420.6 True False 5177.140540042874 5004.030673694857 5686.279735224933 5402.805088178018 5162.976436810016 4817.347016700061 6113.005312029727 5103.632327295283 4743.501471652838 5051.079769880853 4753.900564014526 1.0890300439248006 1.0526157639000138 1.1961292960707282 1.1364993893804778 1.0860505741100395 1.0133461884259432 1.2858925485953956 1.0735673282542155 0.9978125136986654 1.062512709692726 1.0 12.214896011816345 -8.628485750520781 4.586507908606282 0.9992062955580577 1.1215414997596274 0.2704876089579571 0.07132683814822169 0.15418251854305776 5.614351991284779 0.011242397495667366 0.012752117991095626 2.35241667641574e-09 8.628485750520781 0.12233520420156963 ADYDTLS(ph)LRS(ph)LR ddPTM_A549_PD325901_60min_R1 1 ADYDTLSLRSLR 12 1 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PQ15;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 2 ADY(0.019)DT(0.14)LS(0.92)LRS(0.92)LR 43.083999999999996 0.022086 8300900.0 391.54 248.17 404.51 348.61 347.39 267.58 282.2 281.25 390.81 320.24 449.93 True False 431.2888525634861 269.08415685269074 431.96248111623464 370.1428479492461 322.9905248304399 265.40091719586616 292.9392754257651 275.6402481136432 374.38561477838385 300.0199917474997 394.5914623412637 1.0930009737273143 0.6819310160846117 1.094708128131395 0.93804069087822 0.8185441289429128 0.6725967045032852 0.742386248520541 0.6985458997976364 0.9487929935356666 0.7603306720509488 1.0 8.62421593100809 -8.970950974380921 20.231964453658684 0.9774096283989405 0.8379623766851186 0.0 0.15645293919504671 29.361777347054183 20450.53809251707 0.024586456062884156 0.025778382334435843 1.0691755669997497e-09 8.970950974380921 -0.13944725171382188 AEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEK ddPTM_A549_MK2206_60min_R1 1 AEAAAAPTVAPGPAQPGHVSPTPATTSPGEK 31 0 Q9Y6R0;A0A0C4DGH3;M0QYC2 Q9Y6R0 NUMBL Numb-like protein 1 AEAAAAPTVAPGPAQPGHVS(0.962)PT(0.036)PAT(0.002)TSPGEK 119.35 2.1372e-21 7017200.0 1036.5 1178.3 1209.6 874.38 1878.4 1267.8 1140.1 1119.6 1894.1 1748.8 1687.2 True False 1211.435860007993 1238.2704370737815 1381.1394686188853 1088.6031392524103 1602.0898483014341 1401.9577545024708 1347.241412306564 1278.3067286311982 1465.0893742561682 1353.7448654056511 1268.2216756488888 0.9552240615885694 0.9763832781364641 1.0890363215975014 0.8583697630742857 1.263256951890308 1.1054516583507814 1.0623075115139036 1.0079521216014145 1.1552312993756013 1.0674355212490783 1.0 10.308591224467074 -6.738273430765887 24.999783226542668 1.0824381279425572 0.9787472321526829 0.3271938641193046 0.08459094368476631 277.50798468391827 299474.23637935164 0.012797624943375682 0.02662727014486077 1.826949610871218e-07 6.738273430765887 -0.10369089578987434 AEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEKGEAGTPVAAGTTAAAIPR ddPTM_A549_MK2206_60min_R1 1 AEAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR 49 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 AEAAAAPT(0.001)VAPGPAQPGHVS(0.779)PT(0.102)PAT(0.039)T(0.039)S(0.039)PGEKGEAGT(0.001)PVAAGT(0.001)T(0.001)AAAIPR 54.63399999999999 0.00079067 6673600.0 537.52 601.34 464.35 594.2 593.53 663.06 754.21 528.52 765.82 1219.0 981.53 True False 628.2402348977289 631.9456374691906 530.2018123786206 739.7790266746513 506.2225232444369 733.2245690963937 891.2401943476309 603.439328524617 592.3629927632431 943.6270533677322 737.7890121501034 0.8515174725452718 0.8565397790725312 0.7186360919546344 1.0026972677713761 0.6861345383406791 0.9938133491031429 1.2079878931109749 0.8179022980649204 0.8028894209700248 1.2789930967089964 1.0 9.527064492992062 -6.264204509240227 24.98182045978691 0.9157759574667254 0.8136619851171268 0.09036392456373787 0.17199699331592255 455.69453837770067 4117037.3533401615 0.019585194941349228 0.047474156570335775 5.442463069438114e-07 6.264204509240227 -0.10211397234959851 AEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEKGEAGTPVAAGTTAAAIPR ddPTM_A549_PD325901_60min_R1 1 AEAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR 49 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 AEAAAAPTVAPGPAQPGHVS(0.814)PT(0.12)PAT(0.029)T(0.029)S(0.007)PGEKGEAGTPVAAGTTAAAIPR 77.05199999999999 2.6608e-08 10795000.0 306.48 642.57 591.44 656.41 317.33 707.36 548.14 409.08 681.0 713.65 489.1 True False 337.5936239813489 696.7216289996111 631.5786750176406 696.9549548847267 295.0418355290694 701.599494684461 568.9997676537175 400.9205784829483 652.3799382412925 668.590017207729 428.943800660352 0.7870346265912435 1.6242725222442183 1.4724042497999401 1.6248164766847684 0.6878333130700508 1.6356443282415085 1.3265135590670658 0.9346692454016997 1.5208983956335638 1.5586890780993818 1.0 8.744644830926703 -11.074998579005868 1.3810214085593726 0.9993099990203755 1.3261043552634943 0.0 0.36676599902417456 0.7390672973606943 2.507479233873277 0.22375857058448845 0.04886024822752252 8.41397894660867e-12 11.074998579005868 0.3267943562431188 AEAAAS(ph)ALADADADLEER ddPTM_A549_PD325901_60min_R1 2 AEAAASALADADADLEER 18 0 M0R1T5;O43633 M0R1T5 CHMP2A Charged multivesicular body protein 2a 1 AEAAAS(1)ALADADADLEER;AEAAAS(1)ALADADADLEER 44.294 0.051439 2490100.0 0.0 137.29 346.7 151.82 516.12 218.42 0.0 0.0 127.75 175.38 154.56 True False 0.0 148.85991011929684 370.2291468764644 161.19757659176312 479.8695117173393 216.64125993692014 0.0 0.0 122.38111176259187 164.30647686946193 135.5500998365651 0.0 1.098191076943356 2.7313085517668787 1.189210312542164 3.5401634694177697 1.59823755348117 0.0 0.0 0.9028478172288232 1.2121457458723295 1.0 7.082682365537323 -7.549452624126916 23.14189396315503 0.8010755160611579 1.7916864811897801 0.23651533130880642 0.9291475330854941 114.31332041029799 99549.19786835762 0.14034962623475833 0.2081777095422982 2.821937402927513e-08 7.549452624126916 0.9906109651286222 AEADKIYSFTDNAPS(ph)PSIGGSSR ddPTM_A549_MK2206_60min_R1 2 AEADKIYSFTDNAPSPSIGGSSR 23 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEADKIYSFT(0.002)DNAPS(0.979)PS(0.02)IGGSSR;AEADKIYSFT(0.001)DNAPS(0.986)PS(0.014)IGGSSR 139.85 1.0921e-23 40309000.0 6988.7 7797.9 8189.5 6668.799999999999 10351.7 7439.9 6314.3 5417.5 10716.2 10585.7 10533.3 True False 8168.2217026896815 8194.779802476145 9350.894244588591 8302.656299373808 8828.978642814074 8227.185279794074 7461.526576376924 6185.447215397926 8288.997810254983 8194.383017912052 7917.590905709134 1.0316549314008918 1.0350092471394472 1.181027708547804 1.0486341613567096 1.1151092229895039 1.0391020927668415 0.9423985989218822 0.781228442977243 1.0469090799169782 1.0349591328346268 1.0 12.950845811293558 -7.523030334491493 24.207301898714608 0.995173341560862 1.0826594168627808 0.3094288371678525 0.07954381896133148 4.580295455767579 731314.906244834 0.012944452901095645 0.019316720046847213 2.998953041555919e-08 7.523030334491493 0.08748607530191876 AEADKIYSFTDNAPS(ph)PSIGGSSR ddPTM_A549_PD325901_60min_R1 3 AEADKIYSFTDNAPSPSIGGSSR 23 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEADKIYSFT(0.006)DNAPS(0.989)PS(0.005)IGGSSR;AEADKIYSFT(0.001)DNAPS(0.991)PS(0.007)IGGSSR;AEADKIY(0.003)S(0.005)FT(0.013)DNAPS(0.896)PS(0.052)IGGS(0.016)S(0.016)R 129.05 1.7687000000000002e-22 57280200.0 10657.699999999999 10798.0 12193.9 10903.5 13578.600000000002 14970.400000000001 12197.4 12872.0 12650.4 13490.7 14910.6 True False 11739.66185821594 11707.98535558429 13021.45138187746 11576.984431354833 12624.88597962696 14848.486025820299 12661.578731673382 12615.257862111344 12118.747680951015 12638.89489966273 13076.690726081059 0.8977547992934899 0.8953324354634365 0.9957757397983401 0.8853145397302157 0.9654496113796599 1.1354926362375037 0.9682555775690445 0.9647133304873992 0.9267442302340717 0.9665209007700122 1.0 13.674709868617446 -5.663726349404735 1.0489450294675 0.974749400499134 0.875001863410773 0.20172536460940105 0.05928082761923567 1.4634816539933666 1.9085871591505945 0.009407029501037126 0.13810094210567578 2.169070413785999e-06 5.663726349404735 -0.09974753708836104 AEAELGT(ph)FPR ddPTM_A549_MK2206_60min_R1 1 AEAELGTFPR 10 0 Q9NUP1 Q9NUP1 BLOC1S4 Biogenesis of lysosome-related organelles complex 1 subunit 4 1 AEAELGT(1)FPR 57.532 0.013781 1276400.0 462.82 452.81 400.04 460.96 517.85 443.67 374.34 430.09 480.39 577.7 623.32 True False 540.9327011373847 475.856094892115 456.77168735639805 573.8952206932811 441.67495099174715 490.6188649156894 442.3527324645548 491.0565745953843 371.5824320251946 447.19716876992527 468.5324412431635 1.1545256070254615 1.015631049217253 0.9748987415779354 1.2248783012133742 0.9426774159327047 1.047139582509855 0.9441240211475096 1.0480737967523812 0.7930772755868727 0.9544636174677061 1.0 8.872005133497561 -7.850074499576098 1.1353275556733002 0.9081145362069877 1.067057322063321 0.2508859240649829 0.09418342862232902 0.42871745367375697 1.1144805115817578 0.018781625246186415 0.029829622521376095 1.4122952564352688e-08 7.850074499576098 0.15894278585633337 AEAES(ph)DALPDDTVIESEALPSDIAAEAR ddPTM_A549_PD325901_60min_R1 1 AEAESDALPDDTVIESEALPSDIAAEAR 28 0 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AEAES(0.948)DALPDDT(0.051)VIESEALPSDIAAEAR 50.583 0.0028759000000000002 782190.0 0.0 0.0 0.0 152.68 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 162.11069683856147 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AEAGAGSAT(ph)EFQFR ddPTM_A549_MK2206_60min_R1 2 AEAGAGSATEFQFR 14 0 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 AEAGAGS(0.169)AT(0.831)EFQFR;AEAGAGS(0.059)AT(0.941)EFQFR 239.61 2.0499e-57 48814000.0 7932.9 10405.3 9204.8 9098.400000000001 13663.0 11081.0 11303.7 12501.0 17171.0 16583.5 16653.800000000003 True False 9271.779579216027 10934.885325370291 10510.179051540277 11327.508408442698 11653.190799266653 12253.584065027511 13357.435972537232 14273.055032706881 13281.795916452504 12837.275832259047 12518.201838502539 0.740663850833479 0.8735188541007222 0.8395917550405573 0.9048830298935111 0.9308997370073272 0.9788613590922352 1.0670411090076404 1.140184126829374 1.0609987031525054 1.025488804052921 1.0 13.611739722571865 -6.764626624163095 0.984257707672084 1.041238950747915 0.80624075120712 0.8227745457356062 0.046523033683258004 0.20172111480883623 0.3704225444218538 0.008477743408363016 0.028411472689927268 1.719385958975333e-07 6.764626624163095 -0.23499819954079493 AEAGAGSAT(ph)EFQFR ddPTM_A549_PD325901_60min_R1 2 AEAGAGSATEFQFR 14 0 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 AEAGAGS(0.083)AT(0.917)EFQFR;AEAGAGS(0.032)AT(0.968)EFQFR 209.83 3.4443e-38 62412000.0 24001.0 25714.0 23947.0 24101.0 28213.0 25880.0 25939.0 26159.0 26379.0 25313.0 29038.0 True False 26437.563851397645 27881.009023290844 25572.187425009193 25589.664032657653 26231.416209566174 25669.241860486647 26926.122839365435 25637.23822366149 25270.382365443544 23714.732860056396 25466.510087048257 1.0381306178596983 1.0948107505892828 1.0041496592033896 1.0048359176498247 1.0300357653994738 1.007960720677683 1.057314989267395 1.006704025641113 0.9922986023238237 0.931212513178915 1.0 14.636313646775177 -2.0000000000006977 0.21295364717500317 0.9930880709992421 1.3472686369635198 0.35498562689224833 0.031592252004679994 34.78086350401015 0.3981696663327523 0.016669746731178887 4.248355503671713 0.009999999999983935 2.0000000000006977 0.3541805659642777 AEAGEQPGT(ph)AER ddPTM_A549_MK2206_60min_R1 2 AEAGEQPGTAER 12 0 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A 1 AEAGEQPGT(1)AER;AEAGEQPGT(1)AER 88.552 0.00029403 9052300.0 635.33 814.95 538.94 481.61 553.561 439.71000000000004 631.88 461.17999999999995 846.02 847.52 976.1400000000001 True False 742.5581716728207 856.4274740671123 615.3697959800448 599.6044716202946 472.13291019782235 486.23982034412444 746.6844168127986 526.5536773045162 654.3978208163268 656.0646433717965 733.7374979065357 1.0120215660116207 1.167212356613407 0.8386784071085206 0.8171920793622474 0.6434629708102545 0.6626890703166192 1.017645164576163 0.7176322306095213 0.89186912578875 0.8941408136338245 1.0 9.519120206243542 -5.767026480779202 24.994015024709388 0.8834027536333011 1.0896169753664755 0.3154179373690804 0.12933209127090756 133.5080698245513 597263.5078725904 0.020197028087357426 0.06541431031390223 1.7099110513720708e-06 5.767026480779202 0.20621422173317439 AEAGEQPGT(ph)AER ddPTM_A549_PD325901_60min_R1 2 AEAGEQPGTAER 12 0 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A 1 AEAGEQPGT(1)AER;AEAGEQPGT(1)AER 90.73100000000001 0.00028788 13075300.0 723.5400000000001 732.0699999999999 1051.6 776.1 720.12 786.89 863.95 686.96 571.4300000000001 926.4200000000001 773.9200000000001 True False 796.9932481580039 793.7641080998883 1122.9678997845099 824.0379343490146 669.5412554791336 780.4818287325481 896.8280900215798 673.2580438903052 547.4147843013533 867.9256830961738 678.7327462830908 1.1742372126916478 1.1694796110055656 1.6545067346966256 1.2140830671006388 0.9864578645213568 1.14991037784262 1.3213272748851934 0.9919339350830405 0.8065247879951758 1.2787443774433316 1.0 9.406699809147414 -8.400478737365809 4.64922071189542 0.9082243696906209 1.2370822361354736 0.1589077274538997 0.19491687450839892 0.16051036036734392 5.441627372835151 0.028483136732301958 0.03447493912303293 3.9766856546302e-09 8.400478737365809 0.3288578664448527 AEAKIYDSKHPPR ddPTM_A549_MK2206_60min_R1 1 AEAKIYDSKHPPR 13 2 C9IYK1 C9IYK1 Gap junction protein 0 37.722 0.059587 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AEAPAGPALGLPS(ph)PEAESGVDR ddPTM_A549_MK2206_60min_R1 2 AEAPAGPALGLPSPEAESGVDR 22 0 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.998)PEAES(0.002)GVDR;AEAPAGPALGLPS(0.968)PEAES(0.032)GVDR 158.74 1.1209999999999999e-32 28078000.0 1576.9099999999999 1859.81 1078.29 1171.98 2444.3 1330.8600000000001 1590.2399999999998 1801.96 2326.8 2011.9099999999999 3044.3999999999996 True False 1843.0538562520046 1954.466385109215 1231.2077361252134 1459.115152612182 2084.7467079446305 1471.69072184663 1879.1660236000253 2057.3933482710563 1799.7835151360835 1557.4181336678207 2288.3914588344464 0.8053927352056859 0.8540786925086189 0.5380232177375406 0.6376160630119454 0.9110096526083264 0.6431114380212775 0.8211733251954833 0.899056557971491 0.7864841079474981 0.6805733029877088 1.0 11.160118149458478 -11.469641061129368 0.24539752835316614 1.2062943484549706 0.7163371433963973 0.0 0.14328768313151286 5.950832790612423 0.3394738819207089 0.8751055402141523 0.07626370076380871 3.3912432228942953e-12 11.469641061129368 -0.4899572050585733 AEAPAGPALGLPS(ph)PEAESGVDR ddPTM_A549_PD325901_60min_R1 2 AEAPAGPALGLPSPEAESGVDR 22 0 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.998)PEAES(0.002)GVDR;AEAPAGPALGLPS(0.999)PEAES(0.001)GVDR 160.13 9.4245e-33 40340000.0 3580.8 4060.9 3521.1 4096.7 4379.6 3993.0 3338.6 3833.7 4147.4 4317.0 5325.6 True False 3944.320179954364 4403.126294729791 3760.0630200943706 4349.743854719246 4071.992004799778 3960.482331874928 3465.6522499520197 3757.2338460205287 3973.099200972002 4044.4238832561714 4670.584961759907 0.84450239365052 0.9427355097445148 0.8050518405894824 0.9313060120589765 0.8718376901692042 0.8479628064366893 0.742016744867465 0.8044460976050372 0.8506641530989113 0.865935191495201 1.0 12.18938753450708 -10.484753553788046 0.8908282232821568 0.9967290059622477 0.8501728741681074 0.08584114895503803 0.06574216381673031 0.37179661182984036 0.5466243294980593 0.033232194699087066 0.010465655990417341 3.275265014481844e-11 10.484753553788046 -0.1465561317941403 AEAPAGPALGLPS(ph)PEAESGVDRGEPEPMEVEEGELEIVPVRR ddPTM_A549_MK2206_60min_R1 5 AEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRR 42 2 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.878)PEAES(0.122)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.5)PEAES(0.5)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.842)PEAES(0.158)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.998)PEAES(0.002)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.992)PEAES(0.008)GVDRGEPEPMEVEEGELEIVPVRR 122.17 1.0993e-22 174618900.0 3159.4399999999996 3008.2200000000003 2456.03 2461.5299999999997 3721.8 3406.06 3462.6499999999996 3349.7899999999995 4962.84 4597.15 4516.79 True False 3692.6762311082043 3161.3255488535096 2804.3319850463295 3064.6049605022818 3174.328150238647 3766.4870084403565 4091.7686837324095 3824.632990801629 3838.7646640269722 3558.650622140663 3395.1463859377363 1.087633878292494 0.9311308525450677 0.8259826429462703 0.9026429532451046 0.9349606141833264 1.109373965152332 1.2051818150404336 1.1265001729064679 1.130662489230699 1.0481582287232563 1.0 11.729258064055069 -7.252996950299883 21.991193952797985 1.083474473081817 0.9281560152859059 0.5321858359875491 0.07648842110536794 92.69333052980753 241449.05719835608 0.013019186409854819 0.022263805640393496 5.5847411643666655e-08 7.252996950299883 -0.15531845779591125 AEAPAGPALGLPS(ph)PEAESGVDRGEPEPMEVEEGELEIVPVRR ddPTM_A549_PD325901_60min_R1 4 AEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRR 42 2 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.937)PEAES(0.063)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.826)PEAES(0.174)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.992)PEAES(0.008)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.985)PEAES(0.015)GVDRGEPEPMEVEEGELEIVPVRR 126.07 4.3608999999999996e-23 465500000.0 2978.08 3150.0699999999997 3230.08 3589.1400000000003 2962.46 4267.73 4088.54 3923.2899999999995 3615.1600000000003 3364.16 3825.96 True False 3280.4124892533755 3415.537454071628 3449.292652848948 3810.833026271642 2754.387029532181 4232.975021841371 4244.131627034932 3845.0369031885357 3463.227397257547 3151.746363468862 3355.3911747587003 0.97765426395904 1.0179252659914542 1.0279852551310953 1.135734353400895 0.8208840299314013 1.2615444225056058 1.2648694015058153 1.1459280611194453 1.0321381969738899 0.939308175803233 1.0 11.712265251679863 -4.939753236471457 16.16210740512587 1.049327905086755 0.3031066246664871 0.025016937650656712 0.12676139329409036 7928678.742999231 46333419.576416895 0.016912220290170466 194701136.78092197 1.1488061808939374e-05 4.939753236471457 -0.7462212804202679 AEAPLPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 AEAPLPSPK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AEAPLPS(1)PK;AEAPLPS(1)PK 113.67 0.00022799 200958000.0 29667.0 33255.0 25580.0 22167.6 42748.0 31364.0 27371.0 32420.0 40603.0 30151.0 31213.0 True False 34674.064311487804 34947.53745641061 29207.62864357728 27598.662995141396 36459.82582793316 34682.91766226178 32343.956404037326 37015.634282085986 31406.485329667503 23339.86815922107 23461.950665024182 1.477884972419537 1.4895410000375 1.2448934472920212 1.1763157884516398 1.5539980604547732 1.4782623217243915 1.378570642561872 1.5776878406477475 1.3386135610832481 0.9947965747799007 1.0 14.518035345932255 -10.170802247178827 0.7591345032920055 1.011535807832048 1.4143430535690182 0.639477490917898 0.11937478356746538 0.32320528740882365 0.3614344917477581 0.06814927940629728 0.025587901869581636 6.748352390479332e-11 10.170802247178827 0.40280724573697024 AEAPLPS(ph)PK ddPTM_A549_PD325901_60min_R1 4 AEAPLPSPK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK 109.24 0.0004113 141968000.0 21613.2 23751.8 24463.2 23218.6 28279.899999999998 24536.8 26527.4 30503.8 38256.9 55387.0 58835.9 True False 23807.35615320311 25753.447542949354 26123.419861171984 24652.76018873346 26293.61738435864 24336.98043595012 27536.91472335028 29895.377779231825 36649.09553495341 51889.855367595446 51599.45729149946 0.46138772388067645 0.4991030699695363 0.5062731515487389 0.4777716953390279 0.5095715878525389 0.471651868322255 0.5336667509463658 0.5793738800457658 0.710261259685594 1.0056279288841248 1.0 15.6550682714193 -9.488524743809002 0.4932611759714168 1.0039833503093056 0.4696502735635081 0.9791714144737935 0.02810341019362688 0.0918769721548746 0.050703233101704256 0.019689195898791576 0.010257409124451472 3.246947422469009e-10 9.488524743809002 -0.5343330767457976 down AEAPPLEREDS(ph)GTFSLGK ddPTM_A549_MK2206_60min_R1 2 AEAPPLEREDSGTFSLGK 18 1 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 AEAPPLEREDS(0.992)GT(0.008)FSLGK;AEAPPLEREDS(0.998)GT(0.002)FSLGK 219.78 7.995699999999999e-57 111047000.0 12107.4 15086.400000000001 12147.9 12898.400000000001 15616.400000000001 14139.7 13301.0 16327.599999999999 17609.7 19163.800000000003 18282.3 True False 14150.833122489885 15854.233320775596 13870.654886603306 16058.50857903118 13319.248246919999 15635.953668826764 15717.61952906728 18642.087301177882 13621.131066912441 14834.684270162868 13742.300344189 1.0297281217895689 1.153681183185582 1.0093401060375298 1.1685458894675957 0.9692153361028898 1.1377974048892407 1.1437400679220022 1.3565478001694804 0.9911827514868866 1.0794906164626061 1.0 13.74633589879845 -8.903030889881805 22.445380771603194 0.9957946846635511 1.1198706000704344 0.14283862698459426 0.10023224526851299 6.676686485765578 1536.6335962962696 0.01621965198416506 0.017267043808823747 1.2501701067295253e-09 8.903030889881805 0.12407591540688323 AEAPPLEREDS(ph)GTFSLGK ddPTM_A549_PD325901_60min_R1 3 AEAPPLEREDSGTFSLGK 18 1 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 AEAPPLEREDS(0.999)GT(0.001)FSLGK;AEAPPLEREDS(0.92)GT(0.08)FSLGK;AEAPPLEREDS(0.981)GT(0.018)FSLGK 255.41 3.1020999999999994e-87 253525000.0 21055.5 21853.7 21565.9 21259.899999999998 28514.2 21035.6 22249.2 21785.1 20777.8 21556.8 23092.7 True False 23193.038859760134 23695.387994566827 23029.491660291726 22573.075738263888 26511.46096064978 20864.29304793094 23095.905481229394 21350.579090419662 19904.581322745846 20195.699969093497 20252.44429668638 1.1451970201717767 1.1700013908169973 1.1371215900127036 1.1145852524061601 1.3090499384801406 1.030211106485782 1.1404008890427242 1.0542223337413625 0.9828236548218799 0.9971981491832981 1.0 14.305808418998451 -8.233188486891684 1.240893715775636 0.9906009770462019 1.1612931793624597 0.5697993099065668 0.060985565428966534 0.2002782524070946 0.6020423891496512 0.01057830888940966 0.014001455995105884 5.845363361600461e-09 8.233188486891684 0.1706922023162578 AEAPS(ph)SPDVAPAGKEDSPS(ph)ASGR ddPTM_A549_MK2206_60min_R1 1 AEAPSSPDVAPAGKEDSPSASGR 23 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 2 AEAPS(0.751)S(0.249)PDVAPAGKEDS(0.207)PS(0.766)AS(0.026)GR 138.96 2.5625e-23 36214000.0 2776.5 3205.5 3120.2 2240.4 4271.6 2569.4 2364.2 2601.7 4358.4 3857.7 4012.3 True False 3245.105321092321 3368.6462582024997 3562.691278095774 2789.298100575379 3643.2532985543044 2841.292202570318 2793.744537299516 2970.498942372088 3371.2293589346314 2986.242890710993 3015.9351761534117 1.075986429267753 1.116949158867182 1.1812890761928467 0.9248534658934247 1.2080011955697894 0.9420932601721774 0.9263277803148003 0.9849346119437242 1.1178056430358592 0.9901548661664907 1.0 11.558389704632372 -6.234254566397493 24.973034057323616 1.0382230113391053 1.1239623017750648 0.21335380575264806 0.0863505509194477 1076.7069873117694 989103.6321014551 0.012156192980741751 0.03215309799204885 5.831032118410674e-07 6.234254566397493 0.08573929043595951 AEAPSS(ph)PDVAPAGK ddPTM_A549_MK2206_60min_R1 2 AEAPSSPDVAPAGK 14 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 AEAPS(0.03)S(0.97)PDVAPAGK;AEAPS(0.022)S(0.978)PDVAPAGK 231.07 2.1029e-47 24919000.0 6088.9 6359.3 5939.6 5291.9 8128.200000000001 6648.0 5940.0 6972.2 7843.200000000001 7417.3 8205.900000000001 True False 7116.557460687568 6682.961207233551 6781.924593095843 6588.4157375624145 6932.552547361436 7351.486947414754 7019.221111394604 7960.530701466988 6066.727723016729 5741.726778461427 6168.148558681377 1.153759088806535 1.0834630754519685 1.0995073365330357 1.0681350610937428 1.123927622917609 1.1918466096391087 1.1379786081052445 1.290586733723026 0.983557329286127 0.9308671352249158 1.0 12.590621797368325 -8.84145480197291 24.999999383272094 0.9922346279756177 1.1384219764145036 0.6132851568507548 0.06017454716039573 15.50248524395085 4842.6151565185855 0.009964012199719346 0.010607455753926364 1.4406059296224162e-09 8.84145480197291 0.14618734843888592 AEAPSS(ph)PDVAPAGK ddPTM_A549_PD325901_60min_R1 2 AEAPSSPDVAPAGK 14 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 AEAPS(0.02)S(0.98)PDVAPAGK;AEAPS(0.015)S(0.985)PDVAPAGK 222.29 7.247399999999998e-47 32242000.0 13502.400000000001 13854.8 12990.099999999999 12629.0 15350.400000000001 11665.7 12659.2 14814.400000000001 13082.599999999999 12860.8 15745.400000000001 True False 14873.153708058486 15022.39261942483 13871.68630181701 13409.064647459993 14272.240860005142 11570.698406950503 13140.95278338004 14518.915170328026 12532.783817966998 12048.766893162147 13808.815618314262 1.0770767109333128 1.087884220823474 1.0045529381549105 0.9710510313191458 1.033560100627041 0.8379211314549379 0.9516350385583792 1.0514236391911829 0.9075929583233122 0.87254165934276 1.0 13.753301964542946 -5.946978908041438 1.3377381755389937 0.9578806294270724 1.0958622901187773 0.3972957915528583 0.060983618910651995 0.4224177299249632 1.253679280733046 0.00852252525802534 0.05592780822516301 1.1298507857067915e-06 5.946978908041438 0.13798166069170492 AEAPSS(ph)PDVAPAGKEDS(ph)PSASGR ddPTM_A549_PD325901_60min_R1 2 AEAPSSPDVAPAGKEDSPSASGR 23 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 2 AEAPS(0.428)S(0.572)PDVAPAGKEDS(0.755)PS(0.24)AS(0.004)GR;AEAPS(0.111)S(0.889)PDVAPAGKEDS(0.765)PS(0.234)ASGR 238.59 1.1558999999999998e-98 97931000.0 14534.400000000001 15620.4 14828.900000000001 16188.099999999999 18103.0 14258.599999999999 14812.2 15529.1 16408.9 17139.5 16815.3 True False 16009.92158834023 16936.785927798574 15835.278327419686 17188.00217115743 16831.507731959606 14142.482689023771 15375.886376546843 15219.359918156715 15719.290996486849 16057.309044954627 14747.124700969161 1.0856300406334856 1.148480552733477 1.0737875110243702 1.1655154831658714 1.1413416563062941 0.9589993287365601 1.0426362215229903 1.0320221891903116 1.0659224299807946 1.0888433759497105 1.0 13.848146074090423 -7.240089326440408 24.823105238432873 1.0283799019225879 1.1240027446439973 0.5654666821559928 0.039906723278183724 389.0085569785788 452289.43249983597 0.005541007106329908 0.009591217114893547 5.753215920264314e-08 7.240089326440408 0.09562284272140942 AEAPSS(ph)PDVAPAGKEDSPS(ph)ASGR ddPTM_A549_MK2206_60min_R1 1 AEAPSSPDVAPAGKEDSPSASGR 23 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 2 AEAPS(0.441)S(0.559)PDVAPAGKEDS(0.16)PS(0.777)AS(0.063)GR 206.93 3.1346999999999998e-62 30915000.0 2928.5 3523.7 3339.8 2953.7 4532.4 3877.4 3508.7 3626.1 5266.6 5367.7 5365.7 True False 3422.7592050491153 3703.041279060413 3813.4338601962236 3677.3566325966326 3865.6899640339757 4287.703894390188 4146.185372651559 4140.110779465513 4073.723509032017 4155.132841970448 4033.248604213635 0.8486358122019242 0.9181286953627787 0.9454993317823837 0.9117604674194412 0.9584556627616243 1.0630894138067057 1.0280014399112258 1.0264953107874968 1.0100353111821812 1.0302198673370833 1.0 11.977726618998055 -6.974205401067284 3.845169782192275 1.012354557640357 0.9103666533797901 0.793701872301966 0.02821450147120374 0.08559526757078986 2.7826290687723563 0.00417304919787881 0.007963552860445549 1.061193543361315e-07 6.974205401067284 -0.10198790426056692 AEAPSS(ph)PDVAPAGKEDSPSASGR ddPTM_A549_MK2206_60min_R1 2 AEAPSSPDVAPAGKEDSPSASGR 23 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 AEAPS(0.024)S(0.976)PDVAPAGKEDSPSASGR;AEAPS(0.018)S(0.982)PDVAPAGKEDSPSASGR 261.46 1.049e-112 116262000.0 8844.599999999999 8506.8 8693.6 8333.5 12524.6 10025.5 9550.3 8722.400000000001 14181.5 12903.0 13502.2 True False 10337.352250291062 8939.759784519425 9926.483204683485 10375.207874105028 10682.247931237298 11086.391755611698 11285.465888914454 9958.826911229693 10969.412893201976 9988.20333847731 10149.231098237571 1.0185355077870044 0.8808312371635549 0.9780527321332977 1.0222654084511582 1.0525179521325794 1.0923380942165033 1.1119527952096975 0.9812395456202646 1.0808122100113406 0.9841339941714181 1.0 13.309082813090123 -6.2443168259941295 2.8563917975099336 1.0449133333478597 0.9467085449087003 0.3499784576098707 0.05025559309994331 0.20210666643034814 3.2840297777165626 0.0069678803993898685 0.0200580264765716 5.697484784018383e-07 6.2443168259941295 -0.09820478843915947 AEAPSS(ph)PDVAPAGKEDSPSASGR ddPTM_A549_PD325901_60min_R1 2 AEAPSSPDVAPAGKEDSPSASGR 23 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 AEAPS(0.005)S(0.995)PDVAPAGKEDSPSASGR;AEAPS(0.023)S(0.977)PDVAPAGKEDSPSASGR 237.58 1.2259999999999998e-98 152077000.0 15542.3 15138.6 14845.7 13097.8 15944.9 15722.9 16394.0 14788.599999999999 15649.6 16657.5 16918.1 True False 17120.142854363472 16414.382950921325 15853.21847644629 13906.821358737956 14824.985230918797 15594.857915310884 17017.882641141023 14493.629771567732 14991.901734949965 15605.742607213262 14837.280952672052 1.1538598553854504 1.106293195045636 1.0684719475903217 0.9372890762868159 0.9991712954824759 1.0510590158031887 1.1469677426359084 0.9768386686077793 1.0104210995782261 1.0517926200219871 1.0 13.85693911062462 -5.830369370699605 2.6721207191297043 1.0123092457820482 1.138745530241535 0.38342081700632014 0.05197956111894679 0.18553504748165564 2.603816508698137 0.0071018867073639235 0.030918033160645238 1.4778509302544838e-06 5.830369370699605 0.12643628445948685 AEAS(ph)PNDTAGAR ddPTM_A549_MK2206_60min_R1 2 AEASPNDTAGAR 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AEAS(0.967)PNDT(0.033)AGAR;AEAS(0.937)PNDT(0.063)AGAR 95.417 0.00025917 6011000.0 805.69 772.4000000000001 584.19 671.86 853.1099999999999 673.2 435.49 789.5 832.3299999999999 836.0899999999999 786.48 True False 941.670774770709 811.7118608128569 667.0369263991957 836.4657301609419 727.618649107983 744.437577166006 514.6128959261338 901.414042742347 643.8085839578885 647.2166883102764 591.1753102562461 1.5928790638474735 1.3730476336385204 1.128323383650896 1.4149199326311077 1.2308001306627558 1.259250114561327 0.8704911842530666 1.5247829655667238 1.0890315829983297 1.0947965469493965 1.0 9.207442208049937 -2.000000000007172 0.14296257143537255 0.9421828196707147 2.8408418028917763 0.3448431421106648 0.1733461417475373 45.43197713237057 0.41132860009322253 0.33368900615487945 17.84863250926007 0.009999999999834858 2.000000000007172 1.8986589832210616 AEAS(ph)PNDTAGAR ddPTM_A549_PD325901_60min_R1 3 AEASPNDTAGAR 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AEAS(0.873)PNDT(0.127)AGAR;AEAS(0.999)PNDT(0.001)AGAR;AEAS(0.702)PNDT(0.298)AGAR 62.924 0.007309100000000001 18269400.0 1098.56 1424.21 1339.72 1027.6399999999999 1704.97 1571.83 1126.3899999999999 1180.5900000000001 1062.01 1559.5500000000002 1683.49 True False 1210.085002482872 1544.2331749654304 1430.6414555908182 1091.114988860226 1585.2187890271882 1559.0295376185752 1169.2553878342578 1157.0422062950622 1017.3774129392575 1461.0797468455323 1476.4314025223796 0.8196012360720089 1.0459227379797098 0.9689860654187302 0.7390217974205456 1.0736826555700136 1.0559444447978297 0.7919469782589743 0.7836748827736505 0.6890786874358941 0.9896021883233992 1.0 10.527898612661357 -7.780900221038641 24.98603094334565 0.8389535642307148 0.9516859438639925 0.13164666999805585 0.125757394965774 397.4108071579878 510239.5869113552 0.022686680030125247 0.03137042383591968 1.6561504195750525e-08 7.780900221038641 0.11273237963327776 AEASPNDT(ph)AGAR ddPTM_A549_MK2206_60min_R1 1 AEASPNDTAGAR 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AEAS(0.28)PNDT(0.72)AGAR 71.555 0.0087303 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AECGLLLS(ph)PVSGDVHACPFGGSVGDGVGIGGESADKKDEENELDQEK ddPTM_A549_PD325901_60min_R1 1 AECGLLLSPVSGDVHACPFGGSVGDGVGIGGESADKKDEENELDQEK 47 2 Q8WYQ5;Q8WYQ5-3;Q8WYQ5-2 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 1 AECGLLLS(0.768)PVS(0.231)GDVHACPFGGS(0.001)VGDGVGIGGESADKKDEENELDQEK 43.467 0.0042822 5100900.0 684.2 695.16 994.9 780.98 1001.4 996.26 884.09 980.87 640.68 1208.3 894.56 True False 753.6594803185816 753.743572864232 1062.4198968197127 829.2193608657304 931.0651186424552 988.1467888689506 917.7345287426111 961.3057783723704 613.754447624715 1132.0077317902314 784.5347910830596 0.9606450713016126 0.9607522590855149 1.3542036744514916 1.0569567727149274 1.186773523908492 1.2595321458017203 1.1697818110471145 1.2253195005479314 0.7823164180869783 1.4429031633224083 1.0 9.615693616330812 -8.755915420081196 24.993319029840098 0.8972049726769183 1.1503298244101579 0.0 0.2051631213135293 93.57990855643646 423404.41474831477 0.02290788341688742 0.0256144368010413 1.7542221076476043e-09 8.755915420081196 0.2531248517332395 AEDDFKEYVLRPSYNGSFVT(ph)PDRR ddPTM_A549_PD325901_60min_R1 2 AEDDFKEYVLRPSYNGSFVTPDRR 24 3 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 AEDDFKEYVLRPSYNGS(0.005)FVT(0.995)PDRR;AEDDFKEYVLRPS(0.022)Y(0.004)NGS(0.022)FVT(0.952)PDRR 90.616 6.418899999999999e-08 9035600.0 1431.67 1472.1599999999999 1886.85 1474.08 1674.1100000000001 2076.29 1562.56 1639.23 1964.19 2287.73 1903.09 True False 1577.0120844602511 1596.2240897459685 2014.9029875507836 1565.1305737214211 1556.526288965969 2059.381382631756 1622.0240758656407 1606.5342716989428 1881.641924954718 2143.2823373735555 1669.0219946814736 0.944871960636575 0.9563828965900486 1.2072357308480648 0.9377531145238863 0.93259782910352 1.233885107083194 0.9718410428588736 0.9625602759090923 1.1273919282973992 1.284154639185922 1.0 10.704787251590762 -5.564665148177795 24.99998113631421 1.052144048807896 0.9477477104112777 0.11358027708663565 0.12103796584130036 177.28993312298996 106068.71295838628 0.013148063024334168 0.0509223415912485 2.7248013878507864e-06 5.564665148177795 -0.10439633839661822 AEDEALLS(ph)EEDDPIDR ddPTM_A549_PD325901_60min_R1 2 AEDEALLSEEDDPIDR 16 0 Q04721 Q04721 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain 1 AEDEALLS(1)EEDDPIDR;AEDEALLS(1)EEDDPIDR 92.06299999999999 8.993e-06 15243000.0 0.0 0.0 157.0 141.41 164.69 338.45 0.0 230.16 130.72 147.35 220.62 True False 0.0 0.0 167.6549641176951 150.1445745345885 153.1227425496564 335.69377541273997 0.0 225.56927824297298 125.22629299104509 138.04629585309172 193.4851386254076 0.0 0.0 0.8665004728982292 0.7760005528138904 0.7913927841564418 1.7349848045055911 0.0 1.1658222427081655 0.6472140128213493 0.7134723464232209 1.0 7.596078948626003 -5.760850481653603 24.99999999999899 0.8520359480598185 2.4742120534354654e-05 0.4135020077763084 0.3927454947845723 9.638936730576805 409087.51734541747 0.04874418974747113 0.16868668877307852 1.7344010123312976e-06 5.760850481653603 -0.8520112059392841 AEDEALLS(ph)EEDDPIDRRPWTQQHLEAADIR ddPTM_A549_MK2206_60min_R1 1 AEDEALLSEEDDPIDRRPWTQQHLEAADIR 30 2 Q04721 Q04721 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain 1 AEDEALLS(0.999)EEDDPIDRRPWT(0.001)QQHLEAADIR 57.832 0.00073257 5891500.0 226.84 266.41 304.52 244.21 276.4 255.53 194.93 218.77 362.01 347.12 352.9 True False 265.12504629446516 279.969131070887 347.7055150329225 304.04146096300326 235.7419261448661 282.5700149929136 230.3462577852104 249.7813174550262 280.01531301117996 268.70535091468986 265.2651904554842 0.9994716828062575 1.05543109742426 1.3107845565257956 1.1461792647611877 0.8887028325883092 1.065235941842635 0.8683621751865942 0.9416287038119446 1.0556051946746894 1.0129687595017598 1.0 8.051291559453107 -6.724566576744127 24.969003868719536 1.0032289993862582 1.135844106706466 0.3533658580912534 0.0941797176959468 164.87492814283388 111646.89186942959 0.013595679171749829 0.028301034633966073 1.8855298982051938e-07 6.724566576744127 0.13261510732020776 AEDEALLS(ph)EEDDPIDRRPWTQQHLEAADIR ddPTM_A549_PD325901_60min_R1 2 AEDEALLSEEDDPIDRRPWTQQHLEAADIR 30 2 Q04721 Q04721 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain 1 AEDEALLS(0.995)EEDDPIDRRPWT(0.005)QQHLEAADIR;AEDEALLS(1)EEDDPIDRRPWTQQHLEAADIR 141.25 2.9745999999999997e-36 20944200.0 1168.6399999999999 1055.8 1195.49 963.6800000000001 1230.65 1455.46 868.3199999999999 1117.6 1315.85 1275.4499999999998 1251.44 True False 1287.2794724927016 1144.7759713304222 1276.6231404653718 1023.2043249239248 1144.2133895120203 1443.6072163162244 901.3643927629362 1095.3085912597603 1260.5494004916354 1194.9178693303415 1097.5208135317746 1.1728975492959373 1.0430562748478387 1.1631880914925463 0.9322869437266501 1.0425436815453102 1.3153347057453595 0.8212731655287561 0.9979843459506745 1.1485425924955737 1.0887427870138948 1.0 10.100032584144223 AEDEDIVLT(ph)PDGTR ddPTM_A549_MK2206_60min_R1 1 AEDEDIVLTPDGTR 14 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AEDEDIVLT(0.971)PDGT(0.029)R 49.928999999999995 0.028372 4290700.0 0.0 0.0 0.0 161.92 0.0 0.0 0.0 0.0 268.81 0.0 0.0 True False 0.0 0.0 0.0 201.59040726886496 0.0 0.0 0.0 0.0 207.92496420136257 0.0 0.0 0.0 AEDEDIVLT(ph)PDGTR ddPTM_A549_PD325901_60min_R1 2 AEDEDIVLTPDGTR 14 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AEDEDIVLT(0.852)PDGT(0.148)R;AEDEDIVLT(0.892)PDGT(0.108)R 59.306000000000004 0.0089284 7354900.0 0.0 0.0 290.49 211.94 156.52 127.1 113.22 115.08 117.31 286.27 131.41 True False 0.0 0.0 310.2043982582754 225.03105244933656 145.5265751646865 126.06493973987065 117.52864905636126 112.78463912148649 112.37986865651393 268.1948633448563 115.24740307662407 0.0 0.0 2.6916389434999335 1.9525910904883566 1.262731925229854 1.0938636045105015 1.0197943373892813 0.9786306338416999 0.975118446545788 2.32712283474659 1.0 6.848590431876737 -7.511933847429667 3.1984949563449088 0.9896998412536547 1.2400389510372691 0.0 0.8246912010013201 1.0206183926135166 21.54120539115121 0.11524183048704591 0.18305655069346935 3.0765654074083104e-08 7.511933847429667 0.2503391097836144 AEDGAT(ph)PSPSNET(ph)PK ddPTM_A549_MK2206_60min_R1 2 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.901)PS(0.136)PS(0.292)NET(0.671)PK;AEDGAT(0.751)PS(0.182)PS(0.292)NET(0.775)PK 80.387 0.0014988 5624800.0 3459.13 2350.25 1294.1599999999999 939.8 1775.4099999999999 1188.3899999999999 1196.42 1414.19 1902.4299999999998 2650.07 3699.96 True False 4042.946576391171 2469.867686270606 1477.691348138076 1170.051042189225 1514.2495408714055 1314.1446410105625 1413.7940272886751 1614.6557632752376 1471.5326425564456 2051.4173464464516 2781.1578182988746 1.453691893998336 0.8880717483991353 0.5313223645258369 0.42070645343848173 0.5444673189375541 0.47251710505748046 0.5083472854314458 0.5805696291851785 0.5291079250786727 0.7376127068190698 1.0 11.441469898176967 -5.326413728838697 2.9772506998061914 0.6708502864149224 1.5281638471875914 0.6772127201712161 0.16760712408849382 0.21185883034832836 2.868762929637331 0.0326113662288552 0.39496341694900805 4.716135465019678e-06 5.326413728838697 0.857313560772669 AEDGAT(ph)PSPSNET(ph)PK ddPTM_A549_PD325901_60min_R1 2 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.978)PS(0.061)PS(0.069)NET(0.893)PK;AEDGAT(0.999)PS(0.011)PS(0.341)NET(0.649)PK 104.41 2.1306999999999998e-05 5280000.0 1496.25 1531.6100000000001 1461.88 1556.77 2327.6000000000004 1485.0900000000001 1147.77 1623.4299999999998 1264.3600000000001 1566.28 1786.47 True False 1648.1481985189675 1660.6841498857625 1561.0919677985733 1652.9281472188054 2164.1174057840803 1472.9959194200198 1191.4490154338434 1591.0494150938023 1211.2233461303374 1467.3848134969837 1566.745515366384 1.051956544540386 1.0599578129300793 0.9963915342266106 1.0550074220779035 1.3812820171232472 0.9401628439163326 0.760461098339396 1.0155123467653486 0.7730823763341632 0.936581467191138 1.0 10.613555148241153 -7.502194528872445 24.942901653010107 0.8904247610002879 1.1033293884147988 0.4251096814604417 0.11908458072744564 604.7540949288086 729267.8295929361 0.019245077268267227 0.030549267249956928 3.146338692658905e-08 7.502194528872445 0.21290462741451088 AEDGAT(ph)PSPSNET(ph)PKKK ddPTM_A549_PD325901_60min_R1 2 AEDGATPSPSNETPKKK 17 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.993)PS(0.012)PS(0.222)NET(0.774)PKKK;AEDGAT(0.993)PS(0.008)PS(0.119)NET(0.88)PKKK 111.66 1.2527e-09 46514000.0 5517.9 6507.2 5228.8 5554.9 7178.299999999999 6143.799999999999 6125.4 6359.3 6779.4 7015.4 7390.4 True False 6078.0731459367125 7055.584581020388 5583.6578113286905 5898.013556906765 6674.12097179063 6093.766929770398 6358.505448947491 6232.458772725657 6494.485393998551 6572.446446744343 6481.427651605524 0.9377676451315635 1.0885849476808769 0.861485788543139 0.9099867920990771 1.029730073456482 0.940188991889912 0.9810347026511074 0.9615873396630147 1.0020146398440153 1.0140430164512093 1.0 12.662095912437948 -8.763503127986402 24.25200654951381 1.0009513608104066 0.9647370028114461 0.09567157432097129 0.05640738633519984 72.09683778100472 847239.6622614748 0.009191629085870933 0.010024922951823903 1.7238396751048024e-09 8.763503127986402 -0.036214357998960445 AEDGATPS(ph)PSNET(ph)PK ddPTM_A549_MK2206_60min_R1 1 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.39)PS(0.559)PS(0.426)NET(0.625)PK 86.54799999999999 8.3035e-05 5878000.0 1910.0 1404.7 911.7 911.9 1233.2 1355.5 963.83 1239.7 1523.2 1970.1 2994.3 True False 2232.3613049833734 1476.1932300411947 1040.9927691301566 1135.3155409367464 1051.7979136101617 1498.9381102919217 1138.9454349824014 1415.4312714220232 1178.1976320505762 1525.053041706127 2250.732671524104 0.9918376061390312 0.6558723071459114 0.46251284406212445 0.5044204295341558 0.4673135672296112 0.6659778521262155 0.5060331906103954 0.6288757831304556 0.5234729325952109 0.6775807100509292 1.0 11.136178996998561 -10.763745749421492 0.8782231935883686 1.015495588215037 0.5878118920447429 0.1311223174182814 0.1702397835948279 0.407296685292746 0.5245941016827166 0.11729244944401845 0.02582173247245884 1.722876909818482e-11 10.763745749421492 -0.427683696170294 AEDGATPS(ph)PSNET(ph)PK ddPTM_A549_PD325901_60min_R1 2 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.449)PS(0.533)PS(0.092)NET(0.926)PK;AEDGAT(0.109)PS(0.882)PS(0.029)NET(0.98)PK 102.63 9.9278e-06 11706900.0 3941.0 3485.3999999999996 2586.0 2647.8 2781.5 2155.0 2668.5 2705.7 2508.6 2889.7 4573.1 True False 4341.087418789139 3779.1268900123614 2761.501510881272 2811.3485924098954 2586.137035654072 2137.450394487973 2770.0512277592293 2651.732690919412 2403.172265891491 2707.2438488407133 4010.637691269382 1.082393313222758 0.9422758127065458 0.6885442474379296 0.7009729646060582 0.6448194114576203 0.5329452718057567 0.690676007406318 0.6611748293025513 0.5991995415399585 0.6750158097636241 1.0 11.969615928047661 -5.573814491595809 3.7172982254329106 0.746445579511623 1.0613565405022494 0.47657913071114155 0.12223283068598859 0.21491115551103 5.903928364590982 0.024113565497786794 0.12209205244510682 2.667998053556512e-06 5.573814491595809 0.3149109609906263 AEDGATPS(ph)PSNET(ph)PKK ddPTM_A549_PD325901_60min_R1 2 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.099)PS(0.872)PS(0.135)NET(0.894)PKK;AEDGAT(0.074)PS(0.914)PS(0.209)NET(0.803)PKK 82.36 8.5755e-05 31447000.0 9166.7 8553.3 9441.400000000001 9852.9 10831.099999999999 9141.7 8326.7 10521.2 11259.0 11034.3 12535.2 True False 10097.29663583213 9274.116608808961 10082.150179750366 10461.491255440546 10070.360901266515 9067.253026120978 8643.577125045074 10311.346412278268 10785.823384227182 10337.59241487458 10993.449867179805 0.9184829837608048 0.8436038478236213 0.9171052127912948 0.9516113123572442 0.9160328216287128 0.8247868626927243 0.7862479230336862 0.9379536484777258 0.9811136189766528 0.9403410703437833 1.0 13.424356570682326 -8.573513813260597 4.123221236523485 0.9907211206078749 0.8805881255562367 0.4177893117475425 0.04810922160164993 0.12688552238400475 4.567059708380194 0.00824246027935947 0.00945914626125562 2.6698458481069183e-09 8.573513813260597 -0.1101329950516382 AEDGATPS(ph)PSNET(ph)PKKK ddPTM_A549_MK2206_60min_R1 3 AEDGATPSPSNETPKKK 17 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.135)PS(0.825)PS(0.306)NET(0.734)PKKK;AEDGAT(0.005)PS(0.893)PS(0.104)NET(0.998)PKKK;AEDGAT(0.064)PS(0.925)PS(0.156)NET(0.856)PKKK 93.322 2.0905e-06 42104000.0 7125.2 7433.9 6540.6 5622.6 8350.8 7018.200000000001 6037.200000000001 6268.5 8407.5 10169.5 9778.0 True False 8327.759565585093 7812.253757245844 7468.155430265111 7000.137252408108 7122.408382237865 7760.8612656958785 7134.081093217428 7157.079071476126 6503.214674018659 7872.202886975506 7349.852740928658 1.1330512132863326 1.0629129633771086 1.0160959264772298 0.952418708122802 0.9690545692943972 1.0559206475632448 0.9706427250562891 0.9737717643812038 0.8848088394757382 1.0710694709756658 1.0 12.843499629568882 -2.000000007603072 0.4561493615751051 0.9518236489415662 5.411180504856681 0.33594603341218066 0.05349601706830352 43.792014193600664 0.4607537480258393 0.010194824441263734 184.2582341267128 0.0099999998249328 2.000000007603072 4.459356855915114 AEDGATPS(ph)PSNET(ph)PKKK ddPTM_A549_PD325901_60min_R1 3 AEDGATPSPSNETPKKK 17 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGAT(0.066)PS(0.934)PS(0.077)NET(0.923)PKKK;AEDGAT(0.079)PS(0.91)PS(0.295)NET(0.716)PKKK;AEDGAT(0.012)PS(0.868)PS(0.245)NET(0.875)PKKK 108.92 2.1683000000000004e-07 70154600.0 9827.7 10574.6 11526.1 9747.3 13676.0 10657.1 10617.9 12260.1 12152.4 13361.8 13719.099999999999 True False 10825.400869229647 11465.758653561927 12308.330458069846 10349.368583275545 12715.44493963872 10570.312110950248 11021.969994837818 12015.56268763762 11641.676889109372 12518.13366766094 12031.737672540245 0.8997371089577699 0.9529594947644148 1.022988598410092 0.8601723927954038 1.0568253136584655 0.8785357858220784 0.9160746597719633 0.9986556401624729 0.9675806775341272 1.040426080451437 1.0 13.55455739700252 -9.37065515374586 0.5996345931336469 0.9964883811045102 0.946084231019417 0.16598921147806145 0.05845692306733603 1.1477679459008836 0.9257220039421634 0.022578527160361867 0.014220046246815755 4.2593648858477313e-10 9.37065515374586 -0.05040415008509325 AEDGATPS(ph)PSNETPK ddPTM_A549_MK2206_60min_R1 4 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPS(0.392)PS(0.392)NET(0.216)PK;AEDGATPS(0.997)PS(0.002)NETPK;AEDGAT(0.112)PS(0.887)PS(0.001)NETPK;AEDGATPS(0.991)PS(0.008)NETPK 313.23 3.584499999999999e-143 247326100.0 30633.3 33137.5 29358.3 25452.5 38690.399999999994 29153.899999999998 27441.4 30524.4 39981.7 41198.3 40177.299999999996 True False 35803.45212772102 34824.05720829364 33521.74839744858 31688.363642606153 32999.09341286295 32238.94634720743 32427.14717276495 34851.32717705445 30925.9087876553 31891.575416537995 30200.16757293035 1.1855381941593306 1.1531080787613865 1.109985509732585 1.0492777421211972 1.0926791493184096 1.0675088563450397 1.0737406371821174 1.1540110528490288 1.0240310327077609 1.0560065714709386 1.0 14.882268934264204 -2.000000000000496 0.11618496275638049 0.9555197768089687 1.6152126114206815 0.4535667073195029 0.040853049659540036 40.169413152100674 0.31145336000382967 0.15587091050380147 4.298127378625916 0.009999999999988579 2.000000000000496 0.6596928346117128 AEDGATPS(ph)PSNETPK ddPTM_A549_PD325901_60min_R1 2 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPS(0.989)PS(0.01)NETPK;AEDGATPS(0.998)PS(0.002)NETPK 293.77 1.7272999999999996e-123 257500000.0 19504.9 20978.5 18364.2 20580.8 23887.0 19646.1 20864.4 21300.0 21978.2 23363.0 22922.0 True False 21485.023089251532 22746.431819052148 19610.505044905578 21852.029273611905 22209.259525676385 19486.108675243682 21658.406159437756 20875.154790473247 21054.53268524928 21887.85619284548 20102.739314529914 1.068760966010365 1.1315090676528556 0.9755140699024756 1.0870174920796807 1.1047877196330111 0.9693260391214176 1.0773858139713046 1.0384233941383822 1.0473464514376618 1.0887996829877467 1.0 14.295104484247918 -10.957311915208159 0.008622564932191648 8.061429786725179e-05 2.0335855614996046 0.0 0.051880336735140434 5201.7090319887675 9.264307003532094 1143.8944513208853 1042.3200660448906 1.1032859428405814e-11 10.957311915208159 2.0335049472017372 AEDGATPS(ph)PSNETPKK ddPTM_A549_MK2206_60min_R1 1 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.012)PS(0.794)PS(0.111)NET(0.083)PKK 87.85 5.416900000000001e-06 53657000.0 1923.7 3845.1 2006.3 4410.0 2998.0 1766.0 1598.0 1577.2 6404.8 3384.5 3392.6 True False 2248.3735300505314 4040.7991662500176 2290.823508507002 5490.450197972424 2556.998171426585 1952.8769478240743 1888.3359151529592 1800.7729299724251 4954.123026363924 2619.9390993626644 2550.123789003333 0.8816723092996458 1.5845502024940077 0.8983185515877746 2.153013207299345 1.002695705382184 0.7657969217985762 0.7404879415249794 0.7061511828318823 1.9426990359162712 1.027377224062765 1.0 11.31635156525468 -11.478635952102408 2.4524426381089963 0.9943438208302517 1.3373334737700118 0.0 0.4942317280783712 0.8753953285042678 9.547736069610327 0.456928679144096 0.07862422033048608 3.3217278513847555e-12 11.478635952102408 0.34298965293976 AEDGATPS(ph)PSNETPKK ddPTM_A549_PD325901_60min_R1 3 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.001)PS(0.994)PS(0.005)NETPKK;AEDGAT(0.008)PS(0.483)PS(0.483)NET(0.026)PKK;AEDGAT(0.011)PS(0.461)PS(0.461)NET(0.067)PKK 203.81 5.0501e-40 154772300.0 19528.2 25977.699999999997 19810.2 26543.1 27263.100000000002 21726.199999999997 21831.0 23753.600000000002 30480.7 26387.699999999997 27207.800000000003 True False 21510.688488098964 28166.93194774609 21154.639300409966 28182.60700324614 25348.233908589104 21549.269030498654 22661.790651381572 23279.81581366129 29199.70217848949 24721.576118646943 23861.413084454543 0.9014842671707883 1.1804385535782265 0.8865627205537122 1.1810954742494613 1.0623106778660651 0.9031011262504722 0.9497254236860552 0.9756260340184062 1.223720576612153 1.036048285621139 1.0 14.542391862212465 -8.714307387759025 24.999360658989325 1.1056462902469104 1.0094755325732903 0.08992220870203049 0.11046226379658275 193.29317434821957 102524.73300787817 0.020203770180048403 0.022908887685376664 1.9306013797852936e-09 8.714307387759025 -0.09617075767362016 AEDGATPS(ph)PSNETPKKKK ddPTM_A549_PD325901_60min_R1 1 AEDGATPSPSNETPKKKK 18 3 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.019)PS(0.327)PS(0.327)NET(0.327)PKKKK 54.637 0.0019756 22921000.0 683.36 484.13 422.21 637.96 698.03 538.95 690.33 561.54 840.35 727.12 1004.5 True False 752.7342041369566 524.9293341543827 450.86370955498114 677.3653402877173 649.0027808727707 534.5609698883034 716.6008859130709 550.3396441803918 805.0330118958443 681.2095191089246 880.9528680501395 0.8544545700873009 0.5958654011947734 0.5117909548928561 0.7689007719413714 0.7367054520286012 0.6067986032799644 0.8134383937010867 0.624709520951431 0.9138207514752376 0.7732644319743034 1.0 9.782921025209566 -8.864245747419892 4.481326528031025 0.9630543413657293 0.6858544348024047 0.3643006970869591 0.11322263362163236 0.09950274905338137 3.41139149147465 0.01705096264734871 0.018043782991687834 1.366955109222199e-09 8.864245747419892 -0.2771999065633246 AEDGATPSPS(ph)NETPKK ddPTM_A549_MK2206_60min_R1 1 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.055)PS(0.299)PS(0.439)NET(0.206)PKK 85.087 3.6474000000000003e-05 50858000.0 2218.4 3450.7 2706.8 4315.0 3807.9 2222.3 2360.5 1837.2 6768.0 4260.8 3427.7 True False 2592.811685327286 3626.3258908686194 3090.6649418465586 5372.17519370771 3247.7629542946283 2457.4623109566483 2789.3722951930918 2097.6287261890316 5235.058806275145 3298.2823207458837 2576.507490292612 1.0063280215936117 1.407457926876347 1.1995559700451537 2.085060964871325 1.2605292111632023 0.9537959117974681 1.0826175765847685 0.814136475089698 2.03184303791044 1.2801369036079535 1.0 11.331201071289376 -8.743965878621431 24.99842013206607 1.4872593624955126 1.2472489504733177 0.04922131664982499 0.3891468359984586 628.7652509773156 899541.2621032863 0.08101521918627477 0.0917586556486334 1.803159404800326e-09 8.743965878621431 -0.24001041202219486 AEDGATPSPS(ph)NETPKKK ddPTM_A549_MK2206_60min_R1 2 AEDGATPSPSNETPKKK 17 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPS(0.013)PS(0.493)NET(0.493)PKKK;AEDGAT(0.001)PS(0.019)PS(0.49)NET(0.49)PKKK 60.034 0.00076628 9408500.0 1023.4499999999999 1097.92 857.95 1024.5700000000002 1274.31 1415.47 1210.2399999999998 674.71 1587.88 1408.4 1811.42 True False 1196.183339049861 1153.79943840452 979.620210897464 1275.589695994695 1086.8606870682488 1565.2540958870575 1430.1249423996976 770.3522087127159 1228.2277153233122 1090.2414618237187 1361.5944213512983 0.8785166274864162 0.8473884883131685 0.7194654998110608 0.936835283688039 0.7982264542400275 1.1495744043469565 1.0503310824234922 0.5657721540517102 0.9020510778124166 0.8007094070947511 1.0 10.411081315881074 -14.999999999813893 0.1712392323374892 1.5213607120794295 0.8445427515358982 0.0 0.15982658547279738 101.43013947158704 1.093231544859725 17.597866527739093 0.19657170009088207 1.0000000004285275e-15 14.999999999813893 -0.6768179605435313 AEDGATPSPS(ph)NETPKKK ddPTM_A549_PD325901_60min_R1 1 AEDGATPSPSNETPKKK 17 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.047)PS(0.124)PS(0.745)NET(0.084)PKKK 87.566 1.5909999999999999e-06 40854000.0 4928.7 5427.9 5667.2 4287.7 5871.6 5725.1 4787.9 6243.6 5397.5 5309.6 5991.2 True False 5429.057995682826 5885.328182216705 6051.810271642051 4552.541490926775 5459.199071920348 5678.476683750856 4970.106154539409 6119.066499990556 5170.661845311858 4974.350949857996 5254.320381345944 1.0332559877690826 1.1200931338543771 1.1517779336652902 0.8664377427553434 1.0389924244630706 1.0807252454400698 0.9459084703293766 1.1645781101804642 0.9840781433254254 0.9467163379526866 1.0 12.359288455915328 -2.000000000000019 0.18563451002012396 0.9882711145545332 1.423677164979113 0.08483227587754971 0.0853169290913437 89.29604655095184 0.9541325045370087 0.07866378356144889 11.192363276886347 0.00999999999999956 2.000000000000019 0.4354060504245797 AEDGATPSPS(ph)NETPKKKK ddPTM_A549_MK2206_60min_R1 1 AEDGATPSPSNETPKKKK 18 3 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.001)PS(0.091)PS(0.454)NET(0.454)PKKKK 56.528999999999996 0.0024943 3092900.0 411.15 265.82 567.66 639.37 758.56 493.17 596.55 231.26 1098.4 854.64 1094.6 True False 480.54206834759884 279.3491025909805 648.1627238394481 796.01567870241 646.9768288583555 545.3569220602483 704.9354131317257 264.04181320404706 849.6141537843705 661.5762304267419 822.7806105768577 0.5840464179274802 0.33951833453528607 0.7877710236572253 0.9674701475333958 0.7863296977851181 0.6628217960531355 0.8567720289829024 0.3209139955533533 1.0326132420508787 0.8040736764116326 1.0 9.684363985880871 AEDGATPSPS(ph)NETPKKKK ddPTM_A549_PD325901_60min_R1 1 AEDGATPSPSNETPKKKK 18 3 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.001)PS(0.02)PS(0.489)NET(0.489)PKKKK 42.711000000000006 0.021153 3529700.0 369.81 437.81 262.95 340.88 631.0 791.98 559.78 464.85 628.02 454.79 471.97 True False 407.352838960267 474.7057851943286 280.79536824680196 361.93538340534997 586.6807368318247 785.530377460132 581.0827342233695 455.57820208222984 601.6265033983796 426.0744817850531 413.92068206433487 0.9841326046543211 1.1468520558741881 0.6783796519816289 0.8744075835985772 1.4173747827866163 1.8977799648533593 1.403850446238521 1.1006413108186275 1.4534825860788225 1.029362629719549 1.0 8.6932105262052 -6.753470486239022 24.965104638634298 1.288921113223968 0.9197533159948469 0.36109556302604773 0.25758142808287227 188.8846128983409 591736.1872289833 0.04155959721800878 0.08530754152758016 1.764125646758449e-07 6.753470486239022 -0.3691677972291211 AEDGATPSPSNET(ph)PK ddPTM_A549_MK2206_60min_R1 6 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.005)PSPS(0.036)NET(0.959)PK;AEDGATPSPSNET(1)PK;AEDGATPSPS(0.005)NET(0.995)PK;AEDGATPSPSNET(1)PK;AEDGATPSPS(0.002)NET(0.998)PK;AEDGATPSPSNET(1)PK 353.92 8.699399999999996e-211 1070610000.0 35796.15 33719.45 30029.89 26407.5 47095.4 35538.09 34638.56 38619.43 53313.100000000006 48474.7 49110.4 True False 41837.66498815737 35435.62597758425 34288.57995807176 32877.33868547773 40167.72904689911 39298.70709552508 40931.937983216965 44093.85246954409 41237.76797352651 37524.23160285873 36914.93230191275 1.1333534258165103 0.9599266141888103 0.9288539303726447 0.8906243797655343 1.0881160154482479 1.0645748114642708 1.1088179073024083 1.194471985182521 1.1171026303464133 1.0165054969073968 1.0 15.171916892318762 -6.790357342261737 24.99163569735895 1.0739164423890781 0.9733610656750459 0.31198767335737954 0.07463222129997954 218.99296244437974 189258.73131249353 0.01184022625284396 0.022378561448983918 1.6204762030743963e-07 6.790357342261737 -0.10055537671403225 AEDGATPSPSNET(ph)PK ddPTM_A549_PD325901_60min_R1 7 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPSNET(1)PK;AEDGATPSPSNET(0.999)PK;AEDGATPSPSNET(1)PK;AEDGATPS(0.001)PS(0.174)NET(0.825)PK;AEDGATPSPSNET(1)PK;AEDGATPSPS(0.12)NET(0.88)PK;AEDGAT(0.033)PS(0.033)PS(0.022)NET(0.913)PK 347.92 3.902899999999998e-210 1307734000.0 49834.65 48562.91 45863.850000000006 46524.86000000001 60717.4 41751.729999999996 44678.81 43963.880000000005 49810.27 46951.649999999994 50307.85 True False 54893.82698166968 52655.47685724749 48976.44666273471 49398.59493657659 56452.81928765863 41411.71775362196 46379.08656373295 43086.98592440335 47716.91757177986 43987.11480618128 44120.3033777364 1.2441851659925283 1.1934522844604472 1.1100659540670512 1.1196340721787437 1.2795201974097339 0.9386090888604083 1.051196003043269 0.976579547867423 1.0815183468538512 0.9969812408039258 1.0 15.42915509069749 -7.263212446766681 24.99990525517293 1.029047077913806 1.1813180731032862 0.6925560686310266 0.05929325886554381 83.49883208505797 1177320.4029171022 0.008955082319471673 0.014777805693061185 5.454909543177392e-08 7.263212446766681 0.15227099518948028 AEDGATPSPSNET(ph)PKK ddPTM_A549_MK2206_60min_R1 5 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPSNET(1)PKK;AEDGATPSPS(0.003)NET(0.996)PKK;AEDGATPSPSNET(1)PKK;AEDGATPSPS(0.001)NET(0.999)PKK;AEDGAT(0.004)PS(0.004)PS(0.247)NET(0.745)PKK 292.97 1.9835999999999996e-124 2345219400.0 38625.36 38943.6 40939.08 34267.58 48444.600000000006 41148.469999999994 42335.93 41926.64 55349.799999999996 60165.5 60347.6 True False 45144.37646861395 40925.66289843547 46744.85714033238 42663.13863833013 41318.46351417355 45502.77378325623 50027.820475845816 47869.86961494994 42813.15867546807 46574.07176324549 45361.62541097017 0.9952107328520974 0.9022089161853112 1.0304934339726657 0.9405116825468197 0.9108682314585044 1.0031116251017742 1.102866575494166 1.0552944075803152 0.9438188840806885 1.0267284591610357 1.0 15.46918471582458 -7.326705573988811 24.997406015422314 0.9923066471431314 0.9561711795755308 0.17113634701229719 0.054070839115653836 416.34198470097044 159461.0510260201 0.008841667693374966 0.014134385176871982 4.7129672946635585e-08 7.326705573988811 -0.036135467567600665 AEDGATPSPSNET(ph)PKK ddPTM_A549_PD325901_60min_R1 5 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPSNET(1)PKK;AEDGATPSPSNET(1)PKK;AEDGATPS(0.013)PS(0.004)NET(0.982)PKK;AEDGATPSPS(0.001)NET(0.999)PKK;AEDGATPS(0.03)PS(0.101)NET(0.869)PKK 239.86 7.915499999999999e-65 4165746000.0 59713.4 60153.700000000004 60462.2 61152.0 70808.7 57712.6 64507.5 64879.299999999996 66511.9 62839.6 69641.6 True False 65775.46040931827 65223.06340842849 64565.52848074463 64929.22015373138 65835.34118875378 57242.60772015152 66962.36821235852 63585.231464673736 63716.636144362754 58871.89693172673 61076.12469447553 1.0769422706229395 1.0678978690068732 1.057132043064689 1.063086770461132 1.0779226992230686 0.9372337882683188 1.0963755239437352 1.0410816302237518 1.043233120357521 0.963910156812091 1.0 15.898320904987582 -14.999999969339088 0.04655164625508662 0.7808654693665796 1.1672749019188537 0.31113893494969236 0.039982509890286656 459.339900691347 1.636076680773645 13.17454382755838 3.4087710737056702 1.0000000705993614e-15 14.999999969339088 0.3864094325522741 AEDGATPSPSNET(ph)PKKK ddPTM_A549_MK2206_60min_R1 10 AEDGATPSPSNETPKKK 17 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPS(0.008)PS(0.145)NET(0.847)PKKK;AEDGATPSPS(0.002)NET(0.998)PKKK;AEDGATPSPS(0.001)NET(0.999)PKKK;AEDGATPSPSNET(1)PKKK;AEDGATPSPSNET(1)PKKK;AEDGAT(0.007)PS(0.022)PS(0.156)NET(0.815)PKKK;AEDGATPSPS(0.004)NET(0.996)PKKK;AEDGAT(0.001)PS(0.007)PS(0.055)NET(0.937)PKKK;AEDGATPSPSNET(1)PKKK;AEDGATPSPS(0.004)NET(0.996)PKKK 269.41 8.543799999999998e-100 5006279000.0 54697.700000000004 64139.399999999994 60934.200000000004 61575.9 72013.6 59121.1 56078.100000000006 58564.200000000004 91514.09999999999 91258.6 90918.1 True False 63929.33452962774 67403.82149847237 69575.58582069854 76661.99826424714 61420.49483583902 65377.25556058997 66266.7648833162 66865.8546953406 70786.30246798818 70643.21887814978 68340.62655809219 0.9354513961806499 0.9862921207076805 1.018070645892551 1.1217631755114428 0.8987405871034736 0.9566382231660806 0.9696540435868973 0.9784202759467244 1.0357865596654585 1.0336928769317077 1.0 16.060455854242424 -8.7469910024663 24.62672093204824 1.0168992095555034 0.9848750036634403 0.09569205178437079 0.053681859624730446 437.9692814864259 746503.321090488 0.009212284143099351 0.010421926128433373 1.790642951452088e-09 8.7469910024663 -0.03202420589206312 AEDGATPSPSNET(ph)PKKK ddPTM_A549_PD325901_60min_R1 8 AEDGATPSPSNETPKKK 17 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPS(0.001)NET(0.999)PKKK;AEDGATPSPSNET(1)PKKK;AEDGATPS(0.001)PS(0.007)NET(0.992)PKKK;AEDGATPSPSNET(1)PKKK;AEDGATPSPS(0.009)NET(0.991)PKKK;AEDGATPSPS(0.026)NET(0.973)PKKK;AEDGAT(0.013)PS(0.341)PS(0.085)NET(0.561)PKKK;AEDGATPSPS(0.009)NET(0.991)PKKK 290.71 2.4370999999999993e-132 8447987200.0 90328.29999999999 89341.90000000001 94687.29 95288.99999999999 111518.4 101067.59999999999 98917.59999999999 103562.59999999999 100187.29999999999 105677.70000000001 107325.69999999998 True False 99498.36251981989 96871.05545842527 101113.3389003298 101174.7851129792 103685.73230159456 100244.53897445586 102681.96339778743 101496.96269971188 95976.77619172068 99005.19198693077 94125.3192936673 1.057083930938804 1.0291710687980922 1.0742416563269248 1.0748944691206608 1.101571108386885 1.0650114095411123 1.0909069331007923 1.0783173269568982 1.0196701260824084 1.0518444211385722 1.0 16.522295233279397 -8.847691409357944 4.067367987503931 1.008400515369474 1.0716899193505527 0.4434410662779693 0.02214618668982475 0.0910040272448184 2.7620720651054893 0.003473628178485595 0.0036852971814718164 1.4200662001455797e-09 8.847691409357944 0.06328940398107874 AEDGATPSPSNET(ph)PKKKK ddPTM_A549_MK2206_60min_R1 1 AEDGATPSPSNETPKKKK 18 3 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPS(0.167)NET(0.833)PKKKK 81.35600000000001 0.00010582 3025300.0 484.51 543.48 737.75 393.27 671.12 545.48 406.5 260.45 973.47 1061.7 852.52 True False 566.2834428677978 571.1408106092322 842.3740434636098 489.6211676545614 572.3991370272879 603.202331539681 480.3557881787719 297.36958509467297 752.9805993121548 821.861232617326 640.8157556449686 0.8836915102030295 0.8912714857243016 1.31453391406673 0.7640591907135106 0.8932351178712504 0.9413038400289794 0.7496004646379256 0.4640484920589636 1.1750344661146706 1.282523448241591 1.0 9.323765809293231 AEDGATPSPSNET(ph)PKKKK ddPTM_A549_PD325901_60min_R1 1 AEDGATPSPSNETPKKKK 18 3 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPS(0.025)NET(0.975)PKKKK 90.97200000000001 2.446e-06 3859400.0 559.66 470.38 459.91 795.72 568.15 1076.3 934.58 846.15 777.81 575.77 676.99 True False 616.4762712000839 510.02057339875364 491.12225826349777 844.8698171887614 528.2451040110952 1067.534969646128 970.1459533217993 829.2728744581667 745.1213506071359 539.415783938477 593.7245217931946 1.0383203801961445 0.8590188794263804 0.8271887722949143 1.4229997013379976 0.8897141428749896 1.7980307877833794 1.6340001426784918 1.3967300389641275 1.2549950747472673 0.9085287269410874 1.0 9.21364988977511 -6.247775707675211 24.608840166322885 1.22737162483782 0.903260272893794 0.2508874181638404 0.27831816253664043 830.937913109765 1496550.1397060133 0.04055029342959778 0.1066189670265547 5.65228813088972e-07 6.247775707675211 -0.32411135194402596 AEDGS(ph)VIDYELIDQDAR ddPTM_A549_MK2206_60min_R1 2 AEDGSVIDYELIDQDAR 17 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 AEDGS(1)VIDYELIDQDAR;AEDGS(1)VIDYELIDQDAR 91.20700000000001 5.5235000000000006e-06 14851600.0 1399.46 1677.28 1689.49 1488.6599999999999 1843.67 1646.4 1711.63 1614.21 1799.51 2734.4 2582.3999999999996 True False 1635.6546344879737 1762.646387757881 1929.085086670735 1853.3817668284878 1572.4685852948817 1820.6209552081289 2022.6110153024165 1843.0292108107965 1391.9238582269772 2116.6971408767226 1941.1188093857816 0.8426349930664654 0.9080569304851702 0.9938006253626205 0.9548007869827113 0.8100836371744036 0.9379235039117563 1.0419820803974493 0.949467493642997 0.7170729846605405 1.0904521303085506 1.0 10.922672707951163 AEDGS(ph)VIDYELIDQDAR ddPTM_A549_PD325901_60min_R1 2 AEDGSVIDYELIDQDAR 17 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 AEDGS(1)VIDYELIDQDAR;AEDGS(1)VIDYELIDQDAR 157.03 3.8255e-22 28760000.0 1379.9499999999998 909.5799999999999 1164.58 1225.04 964.56 1427.43 1258.33 1350.5900000000001 1362.74 1119.75 1358.1 True False 1520.0415081345016 986.2334987712877 1243.6154019884423 1300.7079385322982 896.812633151354 1415.8054833429073 1306.2164367345974 1323.6514229326422 1305.4687768560032 1049.0487939022696 1191.0623097052212 1.2762065391110395 0.8280284673061084 1.0441228740553696 1.0920570048549463 0.752951903392282 1.1886913655200024 1.0966818663398694 1.111320047781745 1.0960541410961924 0.8807673497467158 1.0 10.218033173557908 AEDGSS(ph)SKEGTSV ddPTM_A549_MK2206_60min_R1 1 AEDGSSSKEGTSV 13 1 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEDGS(0.07)S(0.446)S(0.446)KEGT(0.019)S(0.019)V 49.423 0.025256 2479100.0 876.09 1229.0 883.04 852.07 1012.3 1092.8 766.88 870.35 1108.1 1465.4 1401.8 True False 1023.9525736559593 1291.5508505165724 1008.2683501729665 1060.8271882508761 863.3920109857008 1208.4393706580686 906.2121693444942 993.7247778350874 857.1171192720872 1134.365122235499 1053.6943722881774 0.9717737899960199 1.2257357393983908 0.9568888063655832 1.0067693404750842 0.8193951051582248 1.1468594712467246 0.8600332251719117 0.9430863483470434 0.8134399706537221 1.0765599134520751 1.0 10.041240753606559 -5.923805949004709 8.502030767097523 0.9258904093293584 1.0986144865955627 0.14229682967869672 0.11459307077577383 0.25248241955943823 25.21714198425926 0.014639209245240172 0.04578054207028618 1.1917743964373778e-06 5.923805949004709 0.1727240772662043 AEDGSSS(ph)KEGTSV ddPTM_A549_PD325901_60min_R1 1 AEDGSSSKEGTSV 13 1 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEDGS(0.295)S(0.257)S(0.398)KEGT(0.025)S(0.025)V 45.28 0.041887 2272700.0 1210.0 1282.8 1215.1 1201.5 1198.6 1172.7 1075.0 1000.1 1139.7 1379.7 1277.6 True False 1332.838309245079 1390.906057986991 1297.5639929898807 1275.7139261955176 1114.4144709455227 1163.149920007446 1115.909713262572 980.1522209367274 1091.8023724135098 1292.5855065389253 1120.4632993736777 1.1895421384976337 1.2413669048905813 1.1580602360784147 1.138559314623355 0.994601493479049 1.0380972948044167 0.9959359792385426 0.8747740523804911 0.9744204678759323 1.153616996881077 1.0 10.129879679000146 -6.598527590960284 1.2977215775053035 0.9800276598995373 1.2157295719216799 0.6185037385065071 0.06647889199648702 0.12437752486335636 0.40688300978378994 0.0063595062993796825 0.02020464408346918 2.52041705111185e-07 6.598527590960284 0.23570191202214252 AEDGSVIDY(ph)ELIDQDAR ddPTM_A549_PD325901_60min_R1 2 AEDGSVIDYELIDQDAR 17 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 AEDGS(0.016)VIDY(0.984)ELIDQDAR;AEDGSVIDY(1)ELIDQDAR 87.001 8.5538e-06 1279320.0 629.5600000000001 691.1700000000001 564.3199999999999 702.02 700.19 678.02 670.92 718.08 716.53 929.9300000000001 799.35 True False 693.4724677424234 749.4173215613257 602.6181487318324 745.3821809969015 651.0110699243668 672.4984299168143 696.4522277415113 703.7573310771377 686.4167359001957 871.2140610971537 701.0350174971419 0.9892123081358781 1.0690155311170044 0.8596120503128637 1.06325955536157 0.9286427263628395 0.9592936346001518 0.993462823337995 1.0038832775996198 0.9791475728999433 1.2427539842554378 1.0 9.453342700070102 AEDGSVIDYELIDQDAR ddPTM_A549_MK2206_60min_R1 1 AEDGSVIDYELIDQDAR 17 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 344.47 9.079499999999996e-219 12508000.0 6458.0 5616.6 5607.4 5708.5 8034.4 6879.9 5830.5 5341.5 9416.8 7666.0 8086.1 False True 7547.952517058962 5902.4609495617415 6402.613637841883 7107.082756264305 6852.550403105321 7607.926451491985 6889.826378785563 6098.673982657692 7283.909835539568 5934.245275731772 6078.0982049931745 1.2418279966023416 0.9711032547504503 1.053390949258128 1.1692938344473962 1.127416861655169 1.251695216974621 1.1335496970295005 1.0033852328426702 1.1983863356396276 0.9763325756824353 1.0 12.569404269609834 -11.028203961072641 1.2923852572457635 0.9993409071110061 1.1308642565450102 0.2759170440636257 0.08618336903141441 0.5412220560071634 1.5971499389486061 0.06278671733369956 0.013828854270213744 9.371217958154751e-12 11.028203961072641 0.13152334943400412 AEDGSVIDYELIDQDAR ddPTM_A549_PD325901_60min_R1 2 AEDGSVIDYELIDQDAR 17 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 ; 287.14 8.181599999999997e-116 29605000.0 5616.7 4973.9 5179.4 4832.0 5855.1 5474.9 4865.2 5481.3 5503.8 5793.5 6503.0 False True 6186.903249204 5393.068008903568 5530.905230262355 5130.461665731784 5443.857974998443 5430.314229597312 5050.347848339596 5371.971171503335 5272.494425980062 5427.697421275106 5703.172225913449 1.0848178880330188 0.945626012204074 0.9697945303372802 0.8995803497605339 0.954531576350305 0.9521568023009449 0.8855331117991454 0.941926871346224 0.9244845179360847 0.9516979684767941 1.0 12.477548884916532 -5.259896990717862 24.51911223338475 0.9514326915035952 1.0848179436675414 0.6245488632472562 0.031024683834082863 63.870506674872026 1015209.1258923289 0.005150407509485967 0.044583867090495284 5.496712336184504e-06 5.259896990717862 0.13338525216394614 AEDKDEGIGS(ph)PDIWEDEKAEDLR ddPTM_A549_MK2206_60min_R1 1 AEDKDEGIGSPDIWEDEKAEDLR 23 2 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 AEDKDEGIGS(1)PDIWEDEKAEDLR 45.861999999999995 0.0043333 626970.0 481.16 502.96 564.28 469.25 779.53 590.18 333.4 409.68 676.96 537.34 869.18 True False 562.3680447674342 528.5585156841458 644.3033890147688 584.2162710654329 664.8621696371466 652.6324558702222 393.9744644004984 467.753394592381 523.6296408829818 415.95452080116246 653.3386178523596 0.8607604531567997 0.8090115925209073 0.9861706799648684 0.8942013453695051 1.0176379468011045 0.9989191485657795 0.603017261853528 0.7159432824129848 0.801467457417787 0.6366599332035187 1.0 9.351687107544516 AEDMYSAQSHQAAT(ph)PPKDGK ddPTM_A549_MK2206_60min_R1 1 AEDMYSAQSHQAATPPKDGK 20 1 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 AEDMYSAQS(0.001)HQAAT(0.999)PPKDGK 77.939 0.00026367 13424000.0 1938.0 1843.4 1795.3 1769.5 2533.4 2148.6 1952.0 2249.6 3078.2 3315.3 3679.8 True False 2265.0870204490966 1937.2211862019922 2049.900535723781 2203.027579435875 2160.740215974686 2375.963425874751 2306.6531329027393 2568.4876891110616 2380.992614875317 2566.3714274241506 2766.0041026865697 0.8189022634670203 0.7003681535831434 0.7411053851050871 0.7964657670956142 0.7811775166479321 0.8589876723490832 0.833929758333449 0.92859142421963 0.8608058869336824 0.9278263271307083 1.0 11.43358758103523 -10.53035059680854 0.0824657611993876 1.3461756691619455 0.5287309773924319 0.7205545624627845 0.04424632574506381 11.772388767207872 0.25341476108952016 1.71032412418762 0.8506320975578251 2.9488277388692286e-11 10.53035059680854 -0.8174446917695136 AEDMYSAQSHQAAT(ph)PPKDGK ddPTM_A549_PD325901_60min_R1 2 AEDMYSAQSHQAATPPKDGK 20 1 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 AEDMYSAQS(0.019)HQAAT(0.981)PPKDGK;AEDMYSAQS(0.018)HQAAT(0.981)PPKDGK 86.51899999999999 1.2815999999999999e-05 32121000.0 8522.4 8711.099999999999 8989.7 10132.1 11167.099999999999 10830.6 9348.6 11518.599999999999 11442.8 12173.5 13851.5 True False 9387.587774140713 9445.214968608107 9599.795101457605 10757.936805331336 10382.761420403589 10742.399184473988 9704.366088750205 11288.852486833111 10961.898909408897 11404.863132457487 12147.853311892997 0.7727775050551584 0.7775213221714694 0.7902462151118674 0.8855833643298191 0.8546992751582416 0.8843043218143702 0.798854401645551 0.9292878500418748 0.9023733352687897 0.9388377386226662 1.0 13.56841377240007 -2.575325534083646 0.04296818560455592 1.388176141634259 9.842168900664533e-15 0.7269006558150488 0.03735207760090641 131.06181216330774 0.45799494540990987 4.050429099077079 13.212961593206972 0.00265873140759082 2.575325534083646 -1.3881761416342493 AEDNADTLALVFEAPNQEK ddPTM_A549_MK2206_60min_R1 2 AEDNADTLALVFEAPNQEK 19 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ; 125.28 2.8732e-14 2187100.0 2254.54 1816.63 1965.57 1917.27 3293.3 2179.34 2711.26 2519.5299999999997 3850.3999999999996 3191.8 3076.05 False True 2635.0512337891164 1909.0887075459073 2244.317382054582 2387.0012360695214 2808.8599326081285 2409.956312271188 3203.8608468821117 2876.6810932370163 2978.2905478253265 2470.7701631986256 2312.181890338884 1.1396383843326925 0.8256654528446733 0.9706491480761683 1.0323587629689772 1.2148092433145254 1.0422866480966917 1.3856439496689161 1.244141347727361 1.2880866164853555 1.0685881476376835 1.0 11.175039178161642 -6.586112647387069 3.9593783528785287 1.1637000518239766 0.9671327513518694 0.33393330264436705 0.12601308571589448 0.22853874012765435 7.241306000634322 0.020833266697020906 0.04579008100723051 2.593506570630165e-07 6.586112647387069 -0.19656730047210724 AEDNADTLALVFEAPNQEK ddPTM_A549_PD325901_60min_R1 1 AEDNADTLALVFEAPNQEK 19 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 201.24 3.111e-54 1968200.0 1226.1 1167.8 1645.3 1509.7 1639.1 1634.7 1211.7 1906.9 1510.0 1723.8 1747.5 False True 1350.5727693928866 1266.2146043944567 1756.9599519926358 1602.950740222532 1523.9752705880242 1621.387545183057 1257.8119065676815 1868.8653835658884 1446.5399511664489 1614.958973814451 1532.5685783152016 0.8812478531157226 0.8262042053520661 1.1464152252972029 1.0459243148418869 0.9943928723002893 1.0579543180804978 0.8207214504883245 1.2194334465739782 0.9438663767703455 1.0537596794460078 1.0 10.581735916739074 -5.721627666549782 24.999722135092288 0.9997091937991586 0.8537257151676987 0.27047339144518623 0.1022250488839468 159.08433830922723 99894.70219054123 0.012834200591657208 0.04970520820053143 1.8983327203111095e-06 5.721627666549782 -0.14598347863145988 AEDQTES(ph)SCESHR ddPTM_A549_MK2206_60min_R1 2 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQT(0.009)ES(0.962)S(0.028)CES(0.001)HR;AEDQT(0.113)ES(0.751)S(0.113)CES(0.023)HR 66.673 0.0014712 32461700.0 564.02 694.46 532.16 291.81 583.22 298.08 161.56 529.21 658.28 845.54 823.53 True False 659.2127870349332 729.8050477215128 607.6282900299485 363.3034630998489 497.4291105868625 329.6226277505098 190.91336073348697 604.2271381376535 509.18063105715163 654.5319267469661 619.0247727282657 1.064921496000143 1.1789593565133079 0.9815896177335702 0.5868964847701318 0.8035689886763543 0.5324869734982396 0.30840988784998513 0.9760952465191438 0.822552914664479 1.0573598272363278 1.0 9.273853335526187 -6.006942385528425 13.10534640305503 0.8209866201005275 1.1115873589796257 0.27736309781527 0.21737368110481853 0.7884310610455814 1495.8332261963735 0.032305901653953785 0.09357456946316754 9.841416555215837e-07 6.006942385528425 0.2906007388790982 AEDQTES(ph)SCESHR ddPTM_A549_PD325901_60min_R1 3 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQT(0.001)ES(0.87)S(0.125)CES(0.003)HR;AEDQT(0.237)ES(0.725)S(0.034)CES(0.004)HR;AEDQT(0.174)ES(0.776)S(0.04)CES(0.01)HR 78.69 0.00033035 39221600.0 1543.35 1530.28 1426.98 1240.02 1316.92 1025.73 1420.05 1278.66 1203.08 1507.04 1566.94 True False 1700.0297558457794 1659.242066118127 1523.8234439278249 1316.6132191102506 1224.4240823273642 1017.3767949596973 1474.090779831177 1253.1561232106355 1152.5187314233976 1411.885237206945 1374.2163136510571 1.2370903612176543 1.2074096702503883 1.1088672349400999 0.9580829495556162 0.8909980693463603 0.7403323515034556 1.072677398156314 0.9119060156411727 0.8386734460758605 1.0274112038852223 1.0 10.424393399494033 -6.102271872783917 2.0113442845229166 0.9166530888374508 1.2283078095338704 0.6467714387383621 0.08630630606026912 0.1549644903039662 1.1942589373446222 0.012645518167769917 0.04793805279792049 7.90183809995129e-07 6.102271872783917 0.31165472069641964 AEDQTES(ph)SCESHRK ddPTM_A549_MK2206_60min_R1 4 AEDQTESSCESHRK 14 1 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQT(0.016)ES(0.451)S(0.451)CES(0.082)HRK;AEDQT(0.024)ES(0.628)S(0.346)CES(0.003)HRK;AEDQTES(0.859)S(0.14)CESHRK;AEDQTES(0.856)S(0.142)CES(0.001)HRK 107.34 3.8495e-06 23364100.0 2237.67 2205.2799999999997 2395.02 2121.3999999999996 2705.11 2013.9700000000003 1583.8899999999999 2019.63 3133.03 3231.7 3529.7799999999997 True False 2615.3339902210178 2317.51933248754 2734.669849645835 2641.1430952332635 2307.191902437549 2227.0869686349106 1871.6623107957573 2305.918737357473 2423.4037074208363 2501.6567254868737 2653.2382090279375 0.9857139782331091 0.8734682489502538 1.0306914171297614 0.9954413765965231 0.8695758618985179 0.8393844778267553 0.7054256585131401 0.869096008609905 0.9133758511297388 0.9428692519860106 1.0 11.373538491911969 -4.291384225061424 13.357993082920439 0.9283858743829666 0.9097614398030359 0.0 0.0911718585684157 0.0 0.0 0.013113965609710612 0.0 5.112293452347597e-05 4.291384225061424 -0.018624434579930682 AEDQTES(ph)SCESHRK ddPTM_A549_PD325901_60min_R1 4 AEDQTESSCESHRK 14 1 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQT(0.001)ES(0.757)S(0.192)CES(0.05)HRK;AEDQTES(0.638)S(0.163)CES(0.199)HRK;AEDQTES(0.853)S(0.146)CES(0.001)HRK;AEDQT(0.006)ES(0.838)S(0.156)CES(0.001)HRK 96.666 1.0002e-05 32310400.0 3552.5299999999997 3712.26 3691.51 3708.5 4388.87 3682.63 3450.43 4363.74 3305.7799999999997 4110.89 4450.66 True False 3913.180230365638 4025.105178377601 3942.0380674529492 3937.5656223854157 4080.6109119795387 3652.6398822520846 3581.738001797744 4276.701782412192 3166.849562759617 3851.3277038311217 3903.2570350582732 1.00254228589566 1.0312170431577814 1.009935556907053 1.008789733040635 1.0454374065884744 0.9357928133978378 0.9176280141500522 1.0956751615380984 0.8113351322538097 0.9866958976155726 1.0 11.930462754098961 -7.641479403718748 1.0226467633259435 0.9204471665978018 1.0199896254097773 0.022017997553718804 0.07110777052562552 0.6100502138590993 1.2849340595417096 0.015051808272563265 0.027306074217065508 2.283077196340483e-08 7.641479403718748 0.09954245881197554 AEDQTESS(ph)CESHR ddPTM_A549_MK2206_60min_R1 1 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQT(0.001)ES(0.416)S(0.578)CES(0.004)HR 68.257 0.0012118 29973000.0 313.67 305.11 154.86 226.73 0.0 125.85 176.2 157.51 227.2 397.02 246.35 True False 366.6098275047825 320.63879576982225 176.8214766123682 282.2788601782965 0.0 139.16736346753106 208.2132592302574 179.83752485414445 175.73956276384646 307.3329062576348 185.17449608588421 1.9798073452553009 1.7315494441583872 0.9548910911055383 1.5243938347069952 0.0 0.7515471428796816 1.1244165024415012 0.9711786917499455 0.9490484190778529 1.6596934931854403 1.0 7.532741600985567 -5.649138776679573 1.6646175304956705 0.9277895991492543 2.0825144750128137 0.39184762124349504 0.41007156278750917 0.29791976942038223 1.2930340407009353 0.04691393555045191 0.43374074540069885 2.2431650168265946e-06 5.649138776679573 1.1547248758635593 AEDQTESS(ph)CESHR ddPTM_A549_PD325901_60min_R1 1 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQTES(0.407)S(0.579)CES(0.014)HR 87.148 5.9932e-05 22942000.0 461.81 490.4 317.09 485.51 480.01 462.73 320.5 405.77 335.9 520.66 528.84 True False 508.6926112334464 531.7277290589499 338.60963421706947 515.4988500267879 446.29575354460223 458.96168029764226 332.6968028843296 397.67659902959275 321.7832911237151 487.7854387436084 463.79603259296755 1.0968024206448541 1.1464689037683078 0.7300830762263915 1.111477489673128 0.9622672946326737 0.989576555305362 0.7173343010812426 0.8574385529049966 0.6938034577930847 1.051724043469113 1.0 8.857346668700142 -7.631924234307611 9.332607853037453 0.8425662232565143 1.0040401641713927 0.19114948546235777 0.1426416110486186 0.3418426365636059 27.25061939700885 0.022781998481676665 0.03379998030585544 2.333865185778226e-08 7.631924234307611 0.16147394091487843 AEDS(ph)DS(ph)EPEPEDNVR ddPTM_A549_MK2206_60min_R1 2 AEDSDSEPEPEDNVR 15 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 AEDS(1)DS(1)EPEPEDNVR;AEDS(1)DS(1)EPEPEDNVR 48.111999999999995 0.031832 2058130.0 217.28 136.81 187.3 0.0 0.0 188.7 0.0 0.0 0.0 0.0 0.0 True False 253.95155201402477 143.77304463724352 213.8619564089924 0.0 0.0 208.66810875107748 0.0 0.0 0.0 0.0 0.0 0.0 AEDS(ph)DS(ph)EPEPEDNVR ddPTM_A549_PD325901_60min_R1 2 AEDSDSEPEPEDNVR 15 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 AEDS(1)DS(1)EPEPEDNVR;AEDS(1)DS(1)EPEPEDNVR 112.15 2.1984999999999998e-06 5937700.0 704.71 1053.1 375.53 494.54999999999995 1053.53 841.22 835.37 595.02 1059.26 1234.25 437.8 True False 776.2516404199173 1141.8484328547715 401.0157240453377 525.097230295458 979.533687281192 834.3693832256018 867.1604624820035 583.15185931584 1014.7429858758757 1156.3192443615771 383.95337544285854 2.0217341220781693 2.9739247155666844 1.0444385951361912 1.367606756132308 2.5511787366145193 2.173100789290433 2.25850459442323 1.5188090445701188 2.642880752657672 3.0116136966574607 1.0 8.584787320769859 -11.003860326842545 1.2674306533869815 0.9965181480042865 2.108617125192027 0.0 0.8051483641977389 0.41813147954839 1.1894796957176146 0.4020252392093449 0.09026253664331968 9.911506569385878e-12 11.003860326842545 1.1120989771877405 AEDS(ph)DSEPEPEDNVR ddPTM_A549_MK2206_60min_R1 1 AEDSDSEPEPEDNVR 15 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 AEDS(0.783)DS(0.217)EPEPEDNVR 56.783 0.011573 2085400.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AEDS(ph)DSEPEPEDNVR ddPTM_A549_PD325901_60min_R1 1 AEDSDSEPEPEDNVR 15 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 AEDS(0.904)DS(0.096)EPEPEDNVR 70.17 0.001971 645990.0 0.0 0.0 189.38 149.91 122.2 0.0 0.0 0.0 217.83 0.0 0.0 True False 0.0 0.0 202.23246563445284 159.16960022968786 113.61709356711405 0.0 0.0 0.0 208.6753626242301 0.0 0.0 0.0 AEDSDS(ph)EPEPEDNVR ddPTM_A549_MK2206_60min_R1 3 AEDSDSEPEPEDNVR 15 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 AEDS(0.295)DS(0.705)EPEPEDNVR;AEDS(0.167)DS(0.833)EPEPEDNVR;AEDS(0.076)DS(0.924)EPEPEDNVR 119.01 7.1011e-07 16093800.0 1222.83 1003.02 1149.29 794.64 1830.19 1341.76 1045.05 1226.52 1476.12 1486.23 1751.8200000000002 True False 1429.213808676869 1054.0694337551927 1312.2766037442125 989.326835672745 1560.971475438033 1483.7441526117964 1234.9220576536923 1400.3829660599654 1141.7811768792646 1150.4896107684363 1316.794746227618 1.0853732616805403 0.8004811963101415 0.9965688331485608 0.7513143855615995 1.1854326423384798 1.126784684448703 0.9378242593931391 1.0634785490083498 0.8670912305431534 0.8737045876469236 1.0 10.362814769454006 -4.941898360860604 19.062307578176455 0.9566750163379506 2.7340543187782047 0.07340498931264361 0.1271995968813535 213.41932560371342 108017.59162925924 0.01640532195310472 8380.988944101218 1.143145837070008e-05 4.941898360860604 1.777379302440254 AEDSDS(ph)EPEPEDNVR ddPTM_A549_PD325901_60min_R1 3 AEDSDSEPEPEDNVR 15 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 AEDS(0.43)DS(0.57)EPEPEDNVR;AEDS(0.203)DS(0.797)EPEPEDNVR;AEDS(0.007)DS(0.993)EPEPEDNVR 151.44 3.8814e-14 23843010.0 1490.9299999999998 1414.03 1717.54 1634.29 2077.69 2006.63 1763.29 2294.9800000000005 1939.81 1893.5099999999998 1763.9 True False 1642.2881160353438 1533.1952706387167 1834.1025928070453 1735.2363815581132 1931.7602220413844 1990.2886705760568 1830.3929658593115 2249.2048235230195 1858.2865315709844 1773.9534554515608 1546.9514822833667 1.0616287161193034 0.9911075351734076 1.185623863328817 1.1217135129518283 1.2487529467892706 1.2865876489146935 1.1832258392212618 1.4539595128110268 1.2012571517938455 1.1467414949776766 1.0 10.59521223428237 -4.094349561105471 12.084310680415186 1.1425205634816384 0.4810010181682942 0.0 0.1301160045374238 0.0 0.0 0.019427627169063846 0.0 8.0473045758466e-05 4.094349561105471 -0.6615195453133442 AEEAQKT(ph)ESVDNEGE ddPTM_A549_MK2206_60min_R1 1 AEEAQKTESVDNEGE 15 1 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 AEEAQKT(0.582)ES(0.418)VDNEGE 92.46799999999999 0.00010369999999999999 8658600.0 545.31 756.6 892.91 729.6 818.64 911.51 743.91 357.08 1071.3 841.47 1263.6 True False 637.3449964505148 795.1077083001129 1019.5380645870447 908.3520327529887 698.2191404458504 1007.9653831886314 879.06881767299 407.6971835116369 828.6522605145627 651.3813425737038 949.8132464141399 0.6710213811575103 0.8371200457583722 1.0734089763815562 0.9563480359768818 0.7351120265819193 1.0612248112921514 0.9255175383074161 0.42923931104438584 0.8724370434324852 0.6857993874405147 1.0 9.891500066420257 -10.117176565176647 1.2599188176602139 0.9818311623484163 0.8488738813524148 0.0 0.19604017405873517 0.764306038858129 2.426273016399011 0.057675000434344384 0.031763781010332275 7.635253044122532e-11 10.117176565176647 -0.13295728099600146 AEEAQKTES(ph)VDNEGE ddPTM_A549_MK2206_60min_R1 1 AEEAQKTESVDNEGE 15 1 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 AEEAQKT(0.141)ES(0.859)VDNEGE 89.46600000000001 2.8626e-05 7883800.0 847.43 805.9 1204.1 945.73 919.92 942.19 1200.9 906.5 1349.6 1147.3 1436.6 True False 990.455466325686 846.9168677227874 1374.8594859160053 1177.4338924554336 784.6009866106548 1041.8919204248953 1419.0879852986154 1034.9991510398197 1043.9177548683413 888.1241331655443 1079.8525718570381 0.9172136013181738 0.7842893463376507 1.2731918428009479 1.0903654101879698 0.7265815788736467 0.9648464499493099 1.3141497481069933 0.9584633847377116 0.966722478674196 0.8224494308868704 1.0 10.076618644857112 AEEAQKTES(ph)VDNEGE ddPTM_A549_PD325901_60min_R1 2 AEEAQKTESVDNEGE 15 1 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 AEEAQKT(0.036)ES(0.964)VDNEGE;AEEAQKT(0.014)ES(0.986)VDNEGE 109.79 2.5323e-06 19016900.0 2870.7 2996.1 3153.3 2537.0 3323.0 2668.6 3179.3 3512.8 3169.5 3029.2 2897.5 True False 3162.1313507023538 3248.591861813865 3367.3019003333 2693.704728054953 3089.60394372766 2646.8678063715083 3300.290001279713 3442.7344482617127 3036.2969372331504 2837.9357950334943 2541.1258687658333 1.2443820235627008 1.2784065133269575 1.3251220420532421 1.0600438023021757 1.2158405774792296 1.0416122392461542 1.2987510936963498 1.354806737666155 1.194862865532832 1.1168025283264755 1.0 11.311252122370108 -10.289850108980229 0.8133560841214056 1.0060914520803572 1.222618760805484 0.2652945187100628 0.0997344869502728 0.44831562345961656 0.5653455244551392 0.05378014379021829 0.019107367980174345 5.1303842189187717e-11 10.289850108980229 0.2165273087251267 AEEDEILNR ddPTM_A549_MK2206_60min_R1 2 AEEDEILNR 9 0 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 0 ; 84.476 0.00374 2541500.0 656.9300000000001 734.55 785.66 957.87 1102.87 715.72 609.3199999999999 907.6100000000001 1246.1100000000001 1239.97 1206.2800000000002 False True 767.803723603522 771.9354574832779 897.0784018808811 1192.5481930004187 940.6392839630553 791.4570153435145 720.0255568341686 1036.2664969390516 963.8680746287704 959.8599158034339 906.7273843656607 0.8467856346267423 0.8513423888959942 0.9893584525501786 1.3152224291038876 1.0374003258114004 0.8728720770876591 0.7940926559065962 1.1428644538667105 1.0630185999103632 1.0585981325301477 1.0 9.824525046655802 -5.808821041919788 4.873103969980752 1.0299913351958352 0.847278496351869 0.2360926425264982 0.1271366516608773 0.20370177221680585 10.420859576747876 0.01775079896068074 0.061018553115080656 1.5530268280009075e-06 5.808821041919788 -0.18271283884396616 AEEDEILNR ddPTM_A549_PD325901_60min_R1 2 AEEDEILNR 9 0 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 0 ; 69.825 0.010620000000000001 2933500.0 908.78 926.63 767.49 741.5899999999999 813.8 748.99 917.45 816.73 896.11 707.19 951.56 False True 1001.0386765915231 1004.7203621082674 819.5764866922918 787.396330026911 756.6414954575887 742.8904737668433 952.364061797904 800.4396794377096 858.4496130064675 662.5379027101999 834.5241524358298 1.1995323007364933 1.2039440190864035 0.9820883964833033 0.9435273116166129 0.906674172639683 0.8901964929336991 1.1412061101145128 0.9591569963569855 1.0286695843383364 0.7939109979937283 1.0 9.704809993820554 -5.759264108726999 24.99822376702426 0.9970893622513122 1.2017382456480292 0.4881624664977072 0.08903542922874644 27.243000699020225 313052.86544894765 0.008925113880253735 0.03150222670502985 1.7407479454868194e-06 5.759264108726999 0.20464888339671705 AEEDEILNRS(ph)PR ddPTM_A549_MK2206_60min_R1 37 AEEDEILNRSPR 12 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR 232.59 6.823e-41 57358641350.0 84825.77999999998 103316.952 81481.72 95209.43 111134.54 87218.76 81482.98000000001 84075.79999999999 147897.37800000003 133123.68000000002 128949.59000000004 True False 99142.29787279197 108575.34355441816 93037.0531274411 118535.74462411365 94786.79638503486 96448.19129207259 96287.38273322298 95993.80212133891 114398.85802658145 103050.948229589 96927.84797536582 1.0228463743256628 1.120166658213773 0.9598588545067713 1.2229276425722304 0.9779108725195765 0.9950514047994222 0.993392350541966 0.990363493324805 1.1802475801965178 1.0631717342551479 1.0 16.56462360002963 AEEDEILNRS(ph)PR ddPTM_A549_PD325901_60min_R1 53 AEEDEILNRSPR 12 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR 264.97 9.647099999999999e-77 69083063880.0 108182.14 124892.79000000002 110441.76900000001 135038.86999999997 136997.118 116385.639 114428.87999999999 123735.91000000002 146476.40200000003 131919.02 138956.12900000002 True False 119164.71121331755 135417.94372458465 117937.01158464821 143379.91430437466 127374.91304607986 115437.8329435197 118783.53364628552 121267.90020610664 140320.50820934895 123589.63056375913 121865.40604847702 0.9778387081065061 1.1112090634705352 0.9677644822168309 1.1765431959200903 1.0452097701575065 0.9472567867012195 0.9747108510764281 0.9950970019979855 1.1514384004393392 1.0141485969742408 1.0 16.894929120449024 AEEDEILNRS(ph)PRNR ddPTM_A549_MK2206_60min_R1 4 AEEDEILNRSPRNR 14 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 AEEDEILNRS(1)PRNR;AEEDEILNRS(1)PRNR;AEEDEILNRS(1)PRNR;AEEDEILNRS(1)PRNR 155.1 1.3243e-19 44689500.0 2175.4 3692.12 2730.19 3875.67 2501.85 1917.78 2133.4300000000003 2278.09 3781.04 6799.61 5259.379999999999 True False 2542.55433657635 3880.03313768043 3117.371995559355 4825.2093239854385 2133.831179180655 2120.718206680665 2521.0466154347805 2601.016233858029 2924.6404770801687 5263.57337846576 3953.330794496355 0.6431423194122731 0.9814592654583911 0.788543169698629 1.2205427713519124 0.5397552823435056 0.536438339446077 0.6377019142806024 0.6579303299078954 0.7397914895337669 1.3314275106432945 1.0 11.948852962210854 -5.207800821803033 21.1227439039318 0.8247542299020343 0.6431349376070191 0.04473138575321778 0.25304205309389793 17413.49849099825 6855946.981838208 0.029471939344784693 30.583430204686664 6.1972523123877765e-06 5.207800821803033 -0.18161929229501517 AEEDEILNRS(ph)PRNR ddPTM_A549_PD325901_60min_R1 4 AEEDEILNRSPRNR 14 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 AEEDEILNRS(1)PRNR;AEEDEILNRS(1)PRNR;AEEDEILNRS(1)PRNR;AEEDEILNRS(1)PRNR 144.73 9.7002e-14 57812000.0 4822.650000000001 3513.7599999999998 3141.7700000000004 4196.24 6859.370000000001 6238.91 4626.59 4105.9800000000005 7697.620000000001 4284.79 4474.3099999999995 True False 5312.241877752715 3809.8768867417903 3354.9894051977776 4455.432214447504 6377.591514741857 6188.102385464019 4802.657414217195 4024.0830078210024 7374.115800594616 4014.2476281531626 3923.9982349879747 1.353782942710471 0.9709170745214328 0.8549925877344486 1.135431758027067 1.6252788948467511 1.576989084828929 1.2239193614805264 1.0255058149467629 1.8792352490997526 1.0229993460140954 1.0 11.93810867729603 -6.581773978036081 7.975369934481694 1.4036264111449122 1.0417647506456968 0.13154571145429017 0.29010800243324847 0.3243098686164856 38.65190366648538 0.05019192743135378 0.10486218364229608 2.6195459564139e-07 6.581773978036081 -0.3618616604992153 AEEDEILNRSPR ddPTM_A549_MK2206_60min_R1 3 AEEDEILNRSPR 12 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 0 ;; 204.48 5.6563e-25 78946400.0 6700.6900000000005 6344.43 6012.4 5284.85 7924.459999999999 5716.1 5842.52 5742.450000000001 8443.369999999999 8829.02 8778.22 False True 7831.602655858133 6667.3343877484585 6865.048727781237 6579.638487245931 6758.782431468681 6320.97390795991 6904.030257196166 6556.459873015565 6530.960176291281 6834.5382499792995 6598.345707452931 1.1869039609446683 1.010455451010638 1.0404196797429182 0.9971648620674922 1.024314689034031 0.9579634332921168 1.0463274528641262 0.9936520703378644 0.9897875112718727 1.0357957210789344 1.0 12.687888651737738 AEEDEILNRSPR ddPTM_A549_PD325901_60min_R1 4 AEEDEILNRSPR 12 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 0 ;;; 177.1 4.2889e-16 51445700.0 6120.18 6800.62 5602.62 6216.13 7152.77 5871.06 6696.93 7192.3099999999995 6890.14 7601.79 7520.91 False True 6741.496168161611 7373.7321141779685 5982.84748449096 6600.08623224448 6650.384110916909 5823.248033903737 6951.785335850707 7048.853734791959 6600.571376907282 7121.811682070402 6595.885748976579 1.022075946237793 1.1179290234555808 0.9070574767640968 1.0006368338427563 1.008262478159023 0.8828606582227831 1.053957815586686 1.0686743226087054 1.0007103864604432 1.0797354522363316 1.0 12.687350693926787 -5.7391809884742955 24.999980650272125 0.9965254454336989 1.0700024407198772 0.16023993981602125 0.061148276985291516 267.6328911679941 300592.93568334193 0.00710074551074146 0.027459142241338927 1.8231357678978873e-06 5.7391809884742955 0.07347699528617824 AEEGDADEKLFEES(ph)DDKEDEDADGK ddPTM_A549_PD325901_60min_R1 1 AEEGDADEKLFEESDDKEDEDADGK 25 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 AEEGDADEKLFEES(1)DDKEDEDADGK 221.72 1.6991999999999998e-95 23679000.0 7639.4 8922.7 9505.5 9359.0 8580.0 7569.8 7409.7 6394.7 7749.3 9244.5 9015.1 True False 8414.946264170956 9674.64724321838 10150.600391214972 9937.08417416883 7977.370399393117 7508.154058559189 7691.680188243419 6267.152691954894 7423.623869916662 8660.800692323763 7906.299851427392 1.0643343184930854 1.223663081975285 1.2838623100516984 1.2568564765950285 1.0089891035378444 0.9496419563702327 0.9728546011134114 0.79267834634724 0.9389504584216359 1.0954303346792689 1.0 12.948786955979998 -6.859856712410611 4.642629821164548 0.9553832872266895 1.2134272443258656 0.6562655984047324 0.08450671687962263 0.08662113802092336 3.2225085407070533 0.011126581958847788 0.021618634190860003 1.3808397725001027e-07 6.859856712410611 0.25804395709917605 AEEGKS(ph)PFR ddPTM_A549_MK2206_60min_R1 4 AEEGKSPFR 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEEGKS(1)PFR;AEEGKS(1)PFR;AEEGKS(1)PFR;AEEGKS(1)PFR 69.815 0.0018219999999999998 141354000.0 18818.6 19153.7 18639.1 17122.5 24515.3 19521.3 19973.9 20410.899999999998 28578.000000000004 27863.3 28766.9 True False 21994.719609403204 20128.5415179327 21282.40465404618 21317.513268658226 20909.131845221546 21587.031008809798 23602.89908365061 23304.20758075968 22105.128629688406 21568.961178097725 21623.28480394977 1.0171775384184731 0.9308734403875568 0.9842355057062688 0.985859154237487 0.9669729661703491 0.9983233909432044 1.0915501182012475 1.0777366987509165 1.0222835628401206 0.9974877255539768 1.0 14.400298079791334 -7.524964860061441 24.99791435654589 1.023403798790334 0.97608100873771 0.3926280722065769 0.03410456357542295 68.87691397182437 825349.7814830748 0.005616283670133546 0.008361325324785916 2.9856241840550015e-08 7.524964860061441 -0.047322790052623964 AEEGKS(ph)PFR ddPTM_A549_PD325901_60min_R1 4 AEEGKSPFR 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEEGKS(1)PFR;AEEGKS(1)PFR;AEEGKS(1)PFR;AEEGKS(1)PFR 73.632 0.0006182000000000001 201899000.0 30056.899999999998 30260.6 30491.399999999998 30847.4 35442.1 31111.1 28676.300000000003 31520.9 30110.9 34586.799999999996 35314.5 True False 33108.254361279694 32810.76696158492 32560.729763683375 32752.773838471578 32952.7691646073 30857.741516452323 29767.592288773456 30892.190921832334 28845.44358647536 32402.983545379768 30971.040377059908 1.0690068515038587 1.0594015106411372 1.0513282526925039 1.0575290154841357 1.0639865100888006 0.9963417806044544 0.9611427942479505 0.9974540908452666 0.9313682470880453 1.0462349068964598 1.0 14.918632226288691 -7.394463612323525 3.123078738926646 0.9691471542644722 1.0598816168899519 0.5651793490887638 0.02931329494697548 0.1005929852598007 1.864118662147233 0.003905385481451113 0.0064525360128075155 4.0321472866513976e-08 7.394463612323525 0.09073446262547968 AEEGKS(ph)PFRESSGDGMK ddPTM_A549_MK2206_60min_R1 5 AEEGKSPFRESSGDGMK 17 2 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEEGKS(0.996)PFRES(0.003)S(0.001)GDGMK;AEEGKS(0.998)PFRES(0.002)SGDGMK;AEEGKS(0.982)PFRES(0.009)S(0.009)GDGMK;AEEGKS(0.999)PFRESSGDGMK;AEEGKS(1)PFRESSGDGMK 134.66 8.9608e-13 286678000.0 32373.0 35340.9 34809.9 31679.300000000003 43447.8 35239.0 32608.199999999997 33563.6 49804.0 50212.9 52864.5 True False 37836.77095613963 37139.600856811354 39746.467252543414 39440.72992213783 37056.68617495262 38967.96759024497 38532.68785262247 38321.34308421412 38523.473520645275 38869.7710156264 39736.785664023664 0.9521849924161269 0.9346402894997188 1.0002436429710648 0.9925495800191539 0.9325536918931641 0.9806522329138776 0.9696981577326889 0.9643795401123488 0.9694662735522446 0.9781810573273865 1.0 15.278187556260706 -14.99999999999941 0.19422022086256438 1.1557184955624178 0.960533453133032 0.11296290843153567 0.021066684708910894 46.322891421108636 0.5368501337638885 2.7271587266868296 0.01857105082620573 1.000000000001358e-15 14.99999999999941 -0.19518504242938584 AEEGKS(ph)PFRESSGDGMK ddPTM_A549_PD325901_60min_R1 7 AEEGKSPFRESSGDGMK 17 2 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEEGKS(1)PFRESSGDGMK;AEEGKS(1)PFRESSGDGMK;AEEGKS(1)PFRESSGDGMK;AEEGKS(0.998)PFRES(0.001)S(0.001)GDGMK;AEEGKS(0.998)PFRES(0.001)S(0.001)GDGMK;AEEGKS(0.973)PFRES(0.017)S(0.009)GDGMK;AEEGKS(1)PFRESSGDGMK 118.05 4.6498999999999996e-10 619644000.0 62673.7 58281.9 67857.3 61279.399999999994 75978.4 64715.4 67090.3 70641.4 72286.5 70973.9 75652.8 True False 69036.28788606057 63193.52025334586 72462.5044370935 65064.489362385015 70641.93929525053 64188.37923872245 69643.45807972082 69232.40185989386 69248.54978807521 66492.59584151843 66347.98520261185 1.040518226367225 0.9524557537107877 1.092158325769943 0.9806550894302619 1.0647186810500109 0.9674503158265554 1.0496695245084735 1.0434740655420605 1.0437174478864082 1.0021795784523821 1.0 16.0177650353132 AEEILEK ddPTM_A549_MK2206_60min_R1 2 AEEILEK 7 0 Q5VVC8;P62913-2;P62913 Q5VVC8 RPL11 60S ribosomal protein L11 0 ; 114.93 0.020275 9272900.0 4562.700000000001 5015.3 4709.9 3928.7 6155.799999999999 4261.0 4244.6 4512.8 6400.5 5962.4 6031.9 False True 5332.772212695101 5270.5573479216955 5377.834642235523 4891.231676366042 5250.28997453895 4711.896191777117 5015.788877007666 5152.50321987038 4950.796969498235 4615.489698933359 4534.012758029004 1.1761705353059768 1.1624487246067825 1.186109287564806 1.078786482835643 1.157978650422087 1.0392331127505343 1.1062582186442935 1.1364112751438844 1.0919239167845687 1.0179701613675598 1.0 12.146572735273049 -14.999999997265007 0.05594086207586888 0.49227686628465234 1.35424418325804 0.6717074937818044 0.03562371369145477 121.28028729383395 0.5149737050243833 8.734806499860781 1.7351561347897522 1.0000000062975534e-15 14.999999997265007 0.8619673169733877 AEEILEK ddPTM_A549_PD325901_60min_R1 2 AEEILEK 7 0 Q5VVC8;P62913-2;P62913 Q5VVC8 RPL11 60S ribosomal protein L11 0 ; 138.9 0.015169 17385500.0 5679.1 5324.799999999999 5669.7 5920.4 6572.4 5927.4 6321.4 6565.9 6332.1 6244.2 6483.8 False True 6255.638051267546 5773.539583387223 6054.479936675767 6286.08966179604 6110.777297549098 5879.129219623209 6561.964336202806 6434.937973651094 6065.983857470903 5849.940146358161 5686.333704194619 1.10011799811414 1.0153360466917858 1.0647422841557082 1.1054732255968378 1.0746427514518504 1.0339050652771875 1.1539886115657025 1.1316497251830744 1.0667653664075727 1.0287718678984412 1.0 12.473283051152007 -10.095273254718935 0.9552019825749218 1.0066752735597455 1.081920016435465 0.3100730414064323 0.03877224963294361 0.398958878638299 0.7292358279704286 0.01598681564878533 0.007650646147255882 8.030207088007293e-11 10.095273254718935 0.07524474287571947 AEEKENDTVTIS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AEEKENDTVTISPK 14 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AEEKENDT(0.018)VT(0.103)IS(0.878)PK 149.36 6.5955e-14 37189000.0 6552.7 7068.6 6645.2 6404.0 11805.0 8257.1 7927.5 7306.7 11615.0 8851.4 9299.9 True False 7658.635561866256 7428.361547568305 7587.589283123523 7972.980287486484 10068.500137988938 9130.860841380614 9367.824134777902 8342.447100830283 8984.221045343644 6851.86259243572 6990.478165817389 1.0955810718809018 1.0626399756016853 1.0854177787473733 1.1405486289154603 1.4403163702338293 1.3061854460871423 1.3400834553186152 1.1934014959983512 1.2852083694754133 0.9801708023265873 1.0 12.771175427510196 -3.731028714675695 12.200732931608266 1.1719784093350354 0.7060315174077576 0.0 0.14276325618559005 0.0 0.0 0.02056782004270874 0.0 0.00018576816248667686 3.731028714675695 -0.4659468919272778 AEEKENDTVTIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AEEKENDTVTISPK 14 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AEEKENDT(0.143)VT(0.103)IS(0.754)PK;AEEKENDTVT(0.013)IS(0.987)PK 170.19 4.3508e-23 147928000.0 32173.0 32544.0 32325.0 32255.0 40215.0 30312.0 33438.0 35081.0 34076.0 35958.0 37932.0 True False 35439.179275489216 35286.59709317793 34518.768886015874 34247.31809358003 37390.43713421843 30065.149121911585 34710.501387975695 34381.28193448789 32643.904222482048 33687.60574336931 33266.60447075947 1.0653079819624929 1.0607213346403894 1.0376402832563518 1.0294804245405502 1.12396313747872 0.9037636873441085 1.0434037960948306 1.0335074012350192 0.9812815206666264 1.01265537253674 1.0 15.021786997101929 -7.247355004561818 24.999757987221678 0.9933750649107508 1.0599545233239818 0.404229689608668 0.04074142913692643 602.0258132976747 1068595.9751528392 0.005551109794823518 0.009586330367621788 5.657766181945205e-08 7.247355004561818 0.06657945841323099 AEEKS(ph)PISINVK ddPTM_A549_MK2206_60min_R1 4 AEEKSPISINVK 12 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 AEEKS(0.994)PIS(0.006)INVK;AEEKS(0.989)PIS(0.011)INVK;AEEKS(1)PISINVK;AEEKS(0.994)PIS(0.006)INVK 149.0 1.2478e-12 366013000.0 19208.4 21582.6 19598.0 17991.0 29081.5 20142.5 19491.8 20680.3 32294.3 27315.100000000002 27422.9 True False 22450.30831970817 22681.062153261973 22377.291092917414 22398.795807646675 24803.649874030107 22273.965980490626 23033.207754054092 23611.795855762568 24979.69261340002 21144.599938839157 20613.037096462722 1.0891315149071716 1.1003260726268296 1.0855892311355442 1.0866324890809222 1.2032991430596374 1.0805766213030745 1.1174097075683564 1.1454787446054926 1.211839502180231 1.0257877012440662 1.0 14.331269464785661 AEEKS(ph)PISINVK ddPTM_A549_PD325901_60min_R1 4 AEEKSPISINVK 12 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 AEEKS(0.995)PIS(0.005)INVK;AEEKS(0.999)PIS(0.001)INVK;AEEKS(0.995)PIS(0.005)INVK;AEEKS(0.637)PIS(0.363)INVK 162.81 1.0551000000000001e-14 694327000.0 30232.899999999998 30646.199999999997 28955.199999999997 28396.2 34310.2 30113.8 28921.199999999997 28875.2 31380.600000000002 29997.4 34080.9 True False 33302.12175171534 33228.86282684827 30920.273993762337 30150.168781550696 31900.369915764277 29868.563196998555 30021.812092287873 28299.26148384381 30061.78251097606 28103.35904461169 29889.165356625213 1.114187075964422 1.1117360565400594 1.0344977393926649 1.0087323758228541 1.0672887494562728 0.9993107147897627 1.004437953823065 0.9468066821601967 1.005775241706861 0.9402523860835184 1.0 14.867334990427281 -5.431925358058004 0.643639734998353 0.9988029197633889 1.1905231882792129 0.6741577247622326 0.031186768431567518 1.0178780830227223 0.3257711560274986 0.004293294677167133 0.13664386126109734 3.6989174739862475e-06 5.431925358058004 0.19172026851582402 AEELSPAALS(ph)PSLEPIR ddPTM_A549_PD325901_60min_R1 1 AEELSPAALSPSLEPIR 17 0 A0A2R8YFR7;A0A2R8YF49;Q12774;A0A5F9ZGZ6 A0A2R8YFR7 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 AEELS(0.002)PAALS(0.976)PS(0.022)LEPIR 53.995 0.013405000000000002 1146400.0 742.46 850.03 733.94 1021.3 666.3 708.41 806.35 894.96 569.37 738.46 953.77 True False 817.8339926298357 921.6650112805439 783.749581939753 1084.3833814594109 619.501386610213 702.6409438325869 837.0360905016512 877.1093207174622 545.4413589375104 691.8335095736281 836.4623364461738 0.9777296083700754 1.1018607427040474 0.9369813173772077 1.2963923588796167 0.7406207782674956 0.8400150409854129 1.0006859293365378 1.048593920491367 0.6520811938226574 0.8270946334690678 1.0 9.708156770987987 -6.781449118373059 24.99949586547943 0.8560866101098917 1.0698382869491954 0.3305714773246564 0.1392237769988659 238.7691429605093 298309.7772809131 0.023704161994421744 0.04483803417786717 1.654058561722782e-07 6.781449118373059 0.21375167683930363 AEENTDQAS(ph)PQEDYAGFER ddPTM_A549_MK2206_60min_R1 2 AEENTDQASPQEDYAGFER 19 0 Q9NU22 Q9NU22 MDN1 Midasin 1 AEENTDQAS(1)PQEDYAGFER;AEENTDQAS(1)PQEDYAGFER 186.68 1.5681e-43 30399000.0 1131.26 1368.78 1292.3600000000001 1037.82 1124.1299999999999 1052.48 994.5999999999999 1476.85 2166.0 1674.1100000000001 1797.25 True False 1322.189031348424 1438.4450554679195 1475.6360810716797 1292.0859465895107 958.7719661260061 1163.8527350203185 1175.3059456890692 1686.1980101634392 1675.4044583912469 1295.9273882801103 1350.9432234234027 0.9787154696241687 1.0647709174799957 1.0923005907918875 0.9564324571059746 0.7097055964323934 0.8615112129368536 0.8699891492928518 1.248163491201705 1.2401738499014283 0.9592759827434659 1.0 10.399751327936544 -8.250703843219746 24.870979028012865 1.1266904953959136 0.9340383423077111 0.3132012893999405 0.12650383951459743 654.7720732952457 1516909.4380055026 0.02296903107157089 0.029500236981249147 5.614306998195709e-09 8.250703843219746 -0.1926521530882025 AEENTDQAS(ph)PQEDYAGFER ddPTM_A549_PD325901_60min_R1 3 AEENTDQASPQEDYAGFER 19 0 Q9NU22 Q9NU22 MDN1 Midasin 1 AEENTDQAS(1)PQEDYAGFER;AEENT(0.023)DQAS(0.976)PQEDY(0.001)AGFER;AEENTDQAS(1)PQEDYAGFER 185.55 1.7991e-43 45848100.0 1972.365 1911.9899999999998 1942.72 2286.3 2314.14 1824.02 2379.58 2286.11 1896.75 2306.66 2166.73 True False 2172.598042821628 2073.120107429488 2074.564661724385 2427.519558435963 2151.602789749602 1809.1657858719034 2470.1362190561395 2240.5117426314005 1817.0361936258016 2161.017093942941 1900.2359460331306 1.143330672886739 1.0909803657578758 1.091740563089114 1.2774832322815344 1.1322819117495468 0.9520742882738629 1.2999102686235957 1.1790702871970284 0.9562160938061328 1.1372361934601902 1.0 10.891962849027774 -8.763778452909726 24.999575229785126 0.9793242581472529 1.1448361857651776 0.15591603414271182 0.10079207984666795 42.61730804378075 455485.0491343906 0.015057388402003923 0.016405149534806783 1.7227471776535048e-09 8.763778452909726 0.16551192761792477 AEEPPS(ph)PPVPK ddPTM_A549_MK2206_60min_R1 4 AEEPPSPPVPK 11 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 AEEPPS(1)PPVPK;AEEPPS(1)PPVPK;AEEPPS(1)PPVPK;AEEPPS(1)PPVPK 132.32 7.619799999999999e-08 30017600.0 13248.5 14561.400000000001 13314.4 12284.8 17231.4 13157.900000000001 11965.8 11456.5 19229.4 20136.0 22093.9 True False 15484.522905273408 15302.513063231909 15202.582127132351 15294.576551485632 14696.683886297553 14550.260244492856 14139.830972176022 13080.493959059786 14873.97160304185 15587.26361494065 16607.374869380637 0.9323883531901568 0.9214287738783732 0.9154115112534533 0.9209508830733123 0.8849492470597586 0.8761324627722755 0.8514187873392274 0.7876316432873786 0.8956244873152891 0.9385748041178508 1.0 14.019536423816799 -10.333186309975108 0.9694970285367004 0.9932360554512737 0.8875837962378899 0.3302094370864582 0.04232487638320314 0.33131746306905024 0.6056553906572062 0.020523547743555814 0.008105742592703552 4.6431604342909936e-11 10.333186309975108 -0.10565225921338384 AEEPPS(ph)PPVPK ddPTM_A549_PD325901_60min_R1 2 AEEPPSPPVPK 11 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 AEEPPS(1)PPVPK;AEEPPS(1)PPVPK 130.56 9.247899999999999e-08 76448000.0 35580.0 41439.0 43288.0 46845.0 51865.0 42239.0 40178.0 34711.0 42478.0 42212.0 43711.0 True False 39192.055407388354 44931.20996018313 46225.78399189037 49738.50925728592 48222.18132453656 41895.019588295836 41706.99577624523 34018.66187474729 40692.79738122409 39546.727116055 38334.824106858796 1.0223616860257403 1.1720729390837121 1.2058431222492485 1.2974758699463238 1.2579210273697001 1.0928710530016508 1.0879662747372068 0.8874088421514561 1.06150995418141 1.0316136316634195 1.0 15.226367939835376 -7.621979657125567 2.493153508341868 1.0196798527409627 1.1953754823405152 0.528717903878872 0.07959824292937012 0.17929314516384057 2.2660302882587353 0.012722016803157854 0.019858276342591973 2.3879231334772407e-08 7.621979657125567 0.17569562959955243 AEEPPSQLDQDT(ph)QVQDMDEGSDDEEEGQK ddPTM_A549_MK2206_60min_R1 1 AEEPPSQLDQDTQVQDMDEGSDDEEEGQK 29 0 H7C1L2;Q15459-2;Q15459 H7C1L2 SF3A1 Splicing factor 3A subunit 1 1 AEEPPS(0.002)QLDQDT(0.499)QVQDMDEGS(0.499)DDEEEGQK 44.931000000000004 0.0080741 4361000.0 319.24 0.0 0.0 0.0 319.91 0.0 0.0 155.8 261.44 211.61 163.39 True False 373.1199073313571 0.0 0.0 0.0 272.85166278221453 0.0 0.0 177.88512711748913 202.2242574338908 163.8071540304723 122.81575366540538 3.0380459851092962 0.0 0.0 0.0 2.221634070866522 0.0 0.0 1.4483901438419104 1.646566107348272 1.3337633743366697 1.0 6.940351817887071 -8.312507454205619 24.964645834993405 1.324584108596214 0.6923325562957915 0.07965530262311293 0.9752480705365411 661.7447329369563 323492.58632061083 0.154159052646612 0.18636931132804835 4.869591669548758e-09 8.312507454205619 -0.6322515523004225 AEEPPSQLDQDTQVQDMDEGS(ph)DDEEEGQK ddPTM_A549_MK2206_60min_R1 1 AEEPPSQLDQDTQVQDMDEGSDDEEEGQK 29 0 H7C1L2;Q15459-2;Q15459 H7C1L2 SF3A1 Splicing factor 3A subunit 1 1 AEEPPS(0.004)QLDQDT(0.308)QVQDMDEGS(0.688)DDEEEGQK 54.703 0.0013359 3640900.0 278.33 380.64 276.54 237.11 470.79 610.57 311.25 313.08 335.7 216.89 432.61 True False 325.3052994848284 400.01295015510834 315.75753030081574 295.2019606442727 401.53741465174204 675.1801121364357 367.80009611474253 357.46004876728824 259.66448600274316 167.89439836335302 325.1809975714001 1.000382254542414 1.230124002148303 0.9710208550285437 0.9078081525334366 1.2348120512902243 2.076320932585202 1.1310626969645867 1.0992648753677576 0.7985229393538856 0.5163106073763993 1.0 8.345099143649843 -8.4983334442722 3.259688539624009 0.9055087232247421 1.2311939389783815 0.2467962582850678 0.31970386490751007 0.32227013536710253 7.043425107390689 0.053399369024622924 0.06315107747876991 3.1744358543015852e-09 8.4983334442722 0.3256852157536394 AEEPPSQLDQDTQVQDMDEGS(ph)DDEEEGQK ddPTM_A549_PD325901_60min_R1 1 AEEPPSQLDQDTQVQDMDEGSDDEEEGQK 29 0 H7C1L2;Q15459-2;Q15459 H7C1L2 SF3A1 Splicing factor 3A subunit 1 1 AEEPPSQLDQDT(0.001)QVQDMDEGS(0.999)DDEEEGQK 95.56 3.1872000000000006e-10 4713100.0 470.37 414.45 311.91 423.07 365.56 381.14 394.57 283.28 454.13 635.05 290.29 True False 518.1216161319072 449.3771560124013 333.07808826719906 449.2020730383164 339.88432671353667 378.03612220656424 409.5855772669888 277.62975817113903 435.0444953796153 594.9528346216891 254.58617029992533 2.0351522453930375 1.7651279151691341 1.3083117903647445 1.7644401992029501 1.3350463079480024 1.4849043911584192 1.608828856588951 1.090513902793959 1.7088300392244162 2.336940902645188 1.0 7.992010240665115 -12.652182416554389 0.33296601705212836 3.832981575642803e-21 1.608476982346084 0.0 0.4696959625283744 7.877225941292361 0.40444887562101933 5.707045431946776 0.08188359597461563 2.2274993370075536e-13 12.652182416554389 1.608476982346084 AEEQQLPPPLSPPS(ph)PSTPNHR ddPTM_A549_PD325901_60min_R1 1 AEEQQLPPPLSPPSPSTPNHR 21 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AEEQQLPPPLS(0.086)PPS(0.684)PS(0.181)T(0.049)PNHR 84.529 1.7514000000000002e-05 10420000.0 1779.9 1577.1 1518.1 1436.9 1700.4 1677.0 1999.8 1906.6 1642.4 1857.5 2250.4 True False 1960.5941377068748 1710.007751832932 1621.127395076898 1525.6540495633285 1580.9697700615438 1663.3430680075783 2075.90348333255 1868.5713673012347 1573.3756395998496 1740.2171329970672 1973.615066460961 0.9934024983010313 0.8664342813815648 0.8213999896058072 0.7730251331629194 0.8010527467732098 0.8427900132472361 1.0518279469030454 0.946775994496187 0.7972049192050347 0.8817409040748674 1.0 10.946624918903613 AEEYEFLTPVEEAPK ddPTM_A549_MK2206_60min_R1 2 AEEYEFLTPVEEAPK 15 0 J3KTF8;J3QQX2;P52565;J3KRE2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ; 220.23 5.684500000000001e-46 6460800.0 3078.3 3611.1000000000004 3579.0 3299.2 4696.4 4343.6 3165.8 3126.3 5653.0 5449.4 4797.1 False True 3597.841782790742 3794.889565744827 4086.5560170196673 4107.504148106716 4005.5657812834584 4803.236868951673 3740.9848812210503 3569.462598892209 4372.604525986021 4218.376755227333 3605.8476767752995 0.9977797470380897 1.0524264766332523 1.1333135460326111 1.1391230346646384 1.1108527426387644 1.332068711578853 1.037477236023071 0.9899094245945437 1.2126426066606426 1.1698710354287114 1.0 11.816122738392286 -4.402977980096266 17.169952879867072 1.1029642779825473 0.8981213188595684 0.0 0.10116364020290279 0.0 0.0 0.014169367120787648 0.0 3.9538666673228585e-05 4.402977980096266 -0.2048429591229789 AEFLNKS(ph)VQK ddPTM_A549_MK2206_60min_R1 2 AEFLNKSVQK 10 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1;C9J813 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 AEFLNKS(1)VQK;AEFLNKS(1)VQK 98.531 0.00013734 31219000.0 8578.0 9692.4 11014.3 9722.5 10073.6 7328.9 8208.5 7264.400000000001 10673.0 14471.099999999999 14363.5 True False 10025.756688035273 10185.701760412387 12576.293360787862 12104.512936459603 8591.786784417225 8104.439333469905 9699.878197454986 8294.15094629196 8255.582541278762 11202.068459384556 10796.646537566861 0.9285991398487223 0.943413468707279 1.1648332949521623 1.1211363541764592 0.7957829085653734 0.7506441287366926 0.8984158334446092 0.7682154748173441 0.7646432169983074 1.0375507265526414 1.0 13.398295657225715 -6.764037535714364 24.99999569212411 0.8619236207093431 1.0415852569605677 0.38812524421894723 0.10878090425454433 60.49163214187085 582072.1309247495 0.017248501942911745 0.03369673624885991 1.7217197617342865e-07 6.764037535714364 0.17966163625122455 AEFLNKS(ph)VQK ddPTM_A549_PD325901_60min_R1 2 AEFLNKSVQK 10 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1;C9J813 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 AEFLNKS(1)VQK;AEFLNKS(1)VQK 132.47 2.7605e-07 74770000.0 8564.9 8606.4 10046.8 8886.7 10029.1 11224.099999999999 10457.3 11274.0 11076.1 9748.2 9618.1 True False 9434.402342853871 9331.691532163422 10728.636264316297 9435.611275839952 9324.690614516721 11132.694650938487 10855.25827395413 11049.131225718102 10610.610035175294 9132.696988361778 8435.134674159333 1.1184649335541437 1.1062883869241178 1.2718986333653932 1.1186082546785572 1.105458415866495 1.319800463298234 1.2869098945401238 1.3098938727755745 1.2579064170345062 1.0826972349759152 1.0 13.04219538722244 -10.763948967141133 1.0487947422552262 1.0017767994784186 1.213405277648792 0.3629543949608285 0.0843221961363841 0.37690497829422 0.7457766422921771 0.05748911170058727 0.015113859882151618 1.722070919345979e-11 10.763948967141133 0.21162847817037345 AEFT(ph)SPPSLFK ddPTM_A549_MK2206_60min_R1 1 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-5;Q6UN15-3;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.545)S(0.449)PPS(0.006)LFK 58.676 0.011567000000000001 2484200.0 662.72 817.33 714.39 680.09 1180.8 755.76 755.23 842.53 1089.6 1247.5 1046.1 True False 774.5709340516129 858.9286059013097 815.7012442019226 846.7120805304003 1007.1058841963019 835.7340215671132 892.445515144537 961.9612076399109 842.8073397336578 965.6888835736225 786.3244991087618 0.9850525259349409 1.0923335173644457 1.0373595699058813 1.0767972783374844 1.2807764292448967 1.0628360460781183 1.134958297949581 1.2233641565666844 1.0718314648582297 1.2281047896487474 1.0 9.618980994171244 -9.628439137781822 1.308824342178264 1.0159617054962127 1.1113183364202461 0.0 0.1017487175057778 0.4424121343040456 1.5451852515915017 0.020634062310131655 0.01511089711036337 2.352669174372164e-10 9.628439137781822 0.09535663092403346 AEFT(ph)SPPSLFK ddPTM_A549_PD325901_60min_R1 2 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-5;Q6UN15-3;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.5)S(0.5)PPSLFK;AEFT(0.493)S(0.493)PPS(0.013)LFK 172.17 4.0431e-15 42532000.0 19573.7 20613.1 20815.6 22321.2 24762.7 26401.5 24296.2 26161.9 25960.6 25129.4 24889.6 True False 21560.807614603655 22350.23827868073 22228.2717903713 23699.929828876724 23023.453378677375 26186.49493738942 25220.805186390782 25640.080380886495 24869.56626241834 23542.725395389778 21828.336988173985 0.9877439415693797 1.0239093473217633 1.0183218172971211 1.085741430587072 1.054750684449799 1.1996559770712982 1.1554157882047884 1.174623627754034 1.1393248269848506 1.078539579453286 1.0 14.413914601023121 -6.214329823607188 1.8687252821739109 1.0921250276103915 1.0033560330158258 0.3565496062256338 0.05665936033977814 0.48402796002697634 3.203507891681718 0.010979830923469268 0.03894988631516998 6.104782230044631e-07 6.214329823607188 -0.08876899459456578 AEFTS(ph)PPSLFK ddPTM_A549_MK2206_60min_R1 2 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-5;Q6UN15-3;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.181)S(0.818)PPSLFK;AEFT(0.004)S(0.996)PPSLFK 205.97 1.1954000000000001e-24 55126000.0 32843.0 34582.0 35250.0 32042.0 46735.0 35358.0 31359.0 33378.0 49139.0 47128.0 48468.0 True False 38386.09546574288 36342.076088335336 40248.98005027754 39892.29143842006 39860.34340948012 39099.56009125913 37056.524382529205 38109.43371583792 38009.094958858506 36481.752068182504 36432.05795125078 1.0536351121615686 0.9975301460313922 1.1047682264925611 1.0949777114375303 1.094100790650275 1.0732185413071558 1.0171405752624245 1.0460412026910917 1.043287069034583 1.001364021681076 1.0 15.152920870984987 -9.666015712271335 0.4422084226771684 0.9980404753137898 1.0667437580910604 0.3790458038651534 0.03026553085135136 0.9240136004554661 0.39207858467889845 0.02596129197463479 0.010983303458444059 2.157666345871272e-10 9.666015712271335 0.06870328277727056 AEFTS(ph)PPSLFK ddPTM_A549_PD325901_60min_R1 2 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-5;Q6UN15-3;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.033)S(0.967)PPS(0.001)LFK;AEFT(0.003)S(0.997)PPSLFK 205.09 1.7828e-24 63020000.0 34543.0 36568.0 37207.0 36418.0 40883.0 40359.0 39798.0 40457.0 38798.0 37248.0 41249.0 True False 38049.77993078743 39649.713695407176 39732.090763866756 38667.457148721034 38011.51911869332 40030.329684983786 41312.53466830124 39650.0533970975 37167.45498367937 34896.154923216534 36175.63449895492 1.051806843412426 1.0960336769366856 1.0983108192619147 1.0688812424240437 1.0507492030247996 1.1065550124943966 1.1419988962320682 1.096043067281735 1.0274168096416691 0.9646314544731662 1.0 15.142730700535004 -8.860396844095796 3.7392788228461 1.0115847325575493 1.0898364949598485 0.664762376570025 0.028569000524002554 0.10559872554940639 2.7181228102163892 0.004830192662220909 0.005107039146431986 1.3791234907162308e-09 8.860396844095796 0.07825176240229914 AEFTVETR ddPTM_A549_PD325901_60min_R1 1 AEFTVETR 8 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 0 87.181 0.004247399999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AEGAAT(ph)EEEGTPK ddPTM_A549_MK2206_60min_R1 2 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAAT(1)EEEGTPK;AEGAAT(1)EEEGTPK 128.54 5.3912000000000007e-08 19420300.0 1768.69 1754.16 2038.3999999999999 1501.27 2237.6000000000004 1618.92 2081.8 2203.37 2974.7 2443.6 2843.3 True False 2067.201631681175 1843.4392513768512 2327.475771191085 1869.0812173945706 1908.4520041307974 1790.2330398478784 2460.0361127443257 2515.704445037624 2300.9351996197797 1891.5890628460938 2137.230138912096 0.9672339885368791 0.8625366158813426 1.0890150427954515 0.874534372019468 0.8929557792509174 0.8376416780081306 1.1510394074811923 1.1770863601606238 1.0765968333157672 0.8850656877826738 1.0 11.061526551756877 -7.759219675758022 24.999963090556523 1.0577319680509363 0.9223088343688844 0.3391621083919143 0.09541716313594487 48.848716558908045 550165.3313770809 0.013205407359848044 0.019066811195813597 1.7409260517246576e-08 7.759219675758022 -0.13542313368205183 AEGAAT(ph)EEEGTPK ddPTM_A549_PD325901_60min_R1 2 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAAT(1)EEEGTPK;AEGAAT(0.999)EEEGT(0.001)PK 188.09 2.3906e-25 32551000.0 2061.31 2242.05 1772.34 1864.7399999999998 2445.24 2047.27 2136.73 2382.8999999999996 2390.48 1962.1499999999999 2321.1 True False 2270.5726737437803 2430.9954219751608 1892.6216503462138 1979.9207546681887 2273.4947780200487 2030.5977118902044 2218.0444294135195 2335.371190151113 2290.016438718127 1838.2595141373865 2035.6194146651867 1.115421015041379 1.1942288447740141 0.9297522104138053 0.9726379795772585 1.1168565015843037 0.9975330836703539 1.0896164643715278 1.1472533486988914 1.124972783330809 0.9030467585905485 1.0 10.991252140820439 AEGAATEEEGT(ph)PK ddPTM_A549_MK2206_60min_R1 3 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAATEEEGT(1)PK;AEGAATEEEGT(1)PK;AEGAATEEEGT(1)PK 162.93 9.7963e-19 170717900.0 5309.32 5530.07 5979.66 6027.49 10808.4 7510.08 7673.799999999999 8407.39 11597.4 7730.4 8451.5 True False 6205.403415588651 5811.52694216125 6827.665703473551 7504.225320584311 9218.498677800902 8304.791680812361 9068.030128723893 9599.163279052034 8970.607417242227 5984.0972710040305 6352.759300466206 0.9768044281377478 0.9148035786173676 1.074755925818328 1.1812544700117322 1.4511015201102284 1.307273152975102 1.4274159778190278 1.5110226635452073 1.4120804823478683 0.9419682043619817 1.0 12.633167642601 -6.155326376115441 2.4005765960099343 1.2650052709656587 0.9499595909110702 0.37421949581083813 0.1722863086983797 0.2965314497200377 3.2887286040325066 0.0285192130400605 0.09378594478771853 6.993162561727705e-07 6.155326376115441 -0.31504568005458855 AEGAATEEEGT(ph)PK ddPTM_A549_PD325901_60min_R1 3 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAATEEEGT(1)PK;AEGAATEEEGT(1)PK;AEGAATEEEGT(1)PK 188.09 2.3931e-25 139302400.0 10099.72 8321.46 8920.45 9963.8 10920.34 11097.100000000002 10782.199999999999 9213.57 14648.3 9960.650000000001 12017.599999999999 True False 11125.036139379106 9022.738638366409 9525.845380023527 10579.241296568367 10153.332991527812 11006.728896831779 11192.522521246228 9029.798118444161 14032.682891835408 9331.732859104835 10539.51138584307 1.0555552085955833 0.856086995691847 0.9038222960524409 1.003769615997442 0.9633589850442229 1.044330092153635 1.0619583879647683 0.8567568066365209 1.3314358112164906 0.8854046945325613 1.0 13.363520364403039 -8.749362498980798 24.99985289986195 1.1565113671106422 0.9690080617885105 0.012761630680713898 0.12835953679810885 205.31179540111313 425007.0971719931 0.022423447158139567 0.025332713272927406 1.7808916637909383e-09 8.749362498980798 -0.18750330532213166 AEGAATEEEGT(ph)PKESEPQAAAEPAEAK ddPTM_A549_MK2206_60min_R1 2 AEGAATEEEGTPKESEPQAAAEPAEAK 27 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 AEGAATEEEGT(0.993)PKES(0.007)EPQAAAEPAEAK;AEGAATEEEGT(1)PKESEPQAAAEPAEAK 296.43 3.7759999999999986e-171 480740000.0 12292.7 12802.0 12825.9 11143.0 14215.2 10459.2 10663.0 9837.5 16183.1 16498.6 18094.6 True False 14367.40723233985 13453.56711823691 14644.805481612902 13873.03550022828 12124.162910761572 11565.985601744935 12600.329075892367 11231.995751080218 12517.653689100367 12771.554801224653 13601.21143444547 1.0563329084021125 0.9891447672201723 1.076728021779332 1.0199852834501497 0.8914031642840852 0.8503643706658169 0.9264122638356802 0.8258084807530348 0.9203337327290597 0.9390012693193133 1.0 13.73144753489499 -6.645160641305275 6.370086948676266 0.9357028966004102 1.0374131602199494 0.5473076153647727 0.052294275764744366 0.18353776457445486 9.571468084424252 0.009113891850492082 0.019088951294501517 2.2638067925915716e-07 6.645160641305275 0.10171026361953928 AEGAATEEEGT(ph)PKESEPQAAAEPAEAK ddPTM_A549_PD325901_60min_R1 2 AEGAATEEEGTPKESEPQAAAEPAEAK 27 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 AEGAATEEEGT(1)PKESEPQAAAEPAEAK;AEGAATEEEGT(1)PKESEPQAAAEPAEAK 346.99 7.320699999999996e-257 695320000.0 21158.0 19020.6 20254.0 20432.2 24729.0 19560.2 20983.1 22213.0 22433.0 20797.0 25475.0 True False 23305.944584303626 20623.532714801495 21628.55823719616 21694.250589107003 22992.120350418678 19400.90821636364 21781.623352892886 21769.944289238618 21490.219022858902 19483.873870761778 22341.736499330338 1.0431572579419772 0.9230944387612688 0.9680786557412154 0.9710189979976381 1.0291107117438179 0.8683706486711611 0.9749297398412052 0.974406993381698 0.9618866923572857 0.8720841314794747 1.0 14.447453702416814 -10.711898715863214 0.8592823904059926 1.0010404763330403 0.9659924072813825 0.0 0.05838628465098036 1.4199443491380177 1.7732278639947645 0.03259113477901377 0.0075297151501122666 1.941338574745365e-11 10.711898715863214 -0.035048069051657804 AEGAGRPPPAT(ph)PPRPPPSTSAVR ddPTM_A549_PD325901_60min_R1 1 AEGAGRPPPATPPRPPPSTSAVR 23 2 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 AEGAGRPPPAT(0.982)PPRPPPS(0.006)T(0.006)S(0.006)AVR 57.803000000000004 0.0010076 9576700.0 1153.9 1218.9 1255.9 1124.4 1243.6 1253.0 1249.2 1265.4 1219.3 1274.0 1362.0 True False 1271.043078543717 1321.6209807299215 1341.1329263402115 1193.851634302322 1156.2538261870948 1242.7959834308256 1296.7389895884692 1240.1606043129034 1168.057061229967 1193.5594225777995 1194.482634429359 1.06409506669047 1.1064380030617191 1.122773063152075 0.9994717377140118 0.9679955094026735 1.040447091995228 1.0856072346400927 1.0382407986243904 0.9778769716380044 0.999227103161696 1.0 10.222170164488347 -5.733757188754434 0.3268050400654627 0.989517893160817 1.159358984143374 0.312322321726345 0.04164976712178106 4.078965885976108 0.37694528575033537 0.01616721248375618 0.26109662473556966 1.8460472438245768e-06 5.733757188754434 0.16984109098255706 AEGEAEEESDFDVFPS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 AEGEAEEESDFDVFPSSPR 19 0 B1AL69;Q7L3B6 B1AL69 CDC37L1 Hsp90 co-chaperone Cdc37-like 1 1 AEGEAEEES(0.001)DFDVFPS(0.5)S(0.5)PR;AEGEAEEESDFDVFPS(0.5)S(0.5)PR 109.35 8.333300000000001e-10 2454580.0 284.92 276.92 426.6 349.45 535.63 535.68 400.62 286.5 406.95 585.42 568.08 True False 313.84486865298175 300.25702025082455 455.5516413541956 371.0347328414679 498.00919662318597 531.3175996841381 415.86581332767565 280.7855327450981 389.8473067067459 548.4564812915978 498.2097613558225 0.6299452419376285 0.6026718935287587 0.9143771894682723 0.7447359759305762 0.9995974291389018 1.066453612306223 0.8347203238169061 0.5635889830439522 0.7824963237288242 1.100854547287541 1.0 8.960609478157322 -14.99999966476698 0.2768776261027952 2.5402394935691865 0.7844177444733539 0.280091170125197 0.15459729482265266 58.942738171679636 0.7746464391214121 50.18390490168036 0.06866865743764486 1.0000007719028525e-15 14.99999966476698 -1.7558217490958326 AEGEAEEESDFDVFPSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AEGEAEEESDFDVFPSSPR 19 0 B1AL69;Q7L3B6 B1AL69 CDC37L1 Hsp90 co-chaperone Cdc37-like 1 1 AEGEAEEESDFDVFPS(0.039)S(0.961)PR 204.13 6.259e-55 2938600.0 1599.2 1711.1 1425.2 1489.6 2656.3 1575.4 1527.1 1247.1 2116.2 2209.1 2040.3 True False 1869.105863313828 1798.187681300981 1627.314790571789 1854.5520668706845 2265.5617887793314 1742.1077823341159 1804.5543028974241 1423.8802440835727 1636.884078876988 1710.0627757134168 1533.637200584655 1.2187405617190854 1.1724987373907427 1.0610819755489904 1.2092508359628276 1.4772475445402937 1.135932136798708 1.176650059224887 0.9284335588239249 1.067321579218979 1.1150373602449815 1.0 10.582741521856482 -8.104207723584476 5.283213525532146 1.0250742792182093 1.2114142496410651 0.4075592740237538 0.10471557634529505 0.1684871748760732 7.023056420515013 0.016622438893996283 0.021628228809238807 7.8666943473924e-09 8.104207723584476 0.18633997042285588 AEGEAEEESDFDVFPSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AEGEAEEESDFDVFPSSPR 19 0 B1AL69;Q7L3B6 B1AL69 CDC37L1 Hsp90 co-chaperone Cdc37-like 1 1 AEGEAEEESDFDVFPS(0.191)S(0.809)PR 93.583 1.0765e-06 1360500.0 0.0 0.0 0.0 143.09 0.0 0.0 0.0 113.16 143.93 0.0 0.0 True False 0.0 0.0 0.0 151.9283443190317 0.0 0.0 0.0 110.9029350276973 137.8811226300575 0.0 0.0 0.0 AEGEPQEES(ph)PLK ddPTM_A549_MK2206_60min_R1 2 AEGEPQEESPLK 12 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(1)PLK;AEGEPQEES(1)PLK 188.4 1.9332000000000002e-19 66490000.0 3995.6 4443.7 3804.2 2966.3 5405.200000000001 4851.1 4414.700000000001 4552.5 5849.7 4159.9 5268.8 True False 4669.959596958934 4669.865349422697 4343.692763326692 3693.043633162266 4610.102240225145 5364.4401821004385 5216.793845197605 5197.83081644653 4524.752290051374 3220.175700823975 3960.4115485175857 1.1791601806400493 1.1791363832303403 1.0967781277560844 0.9324898657425141 1.164046257250902 1.3545158416953895 1.3172352876180995 1.3124471416088361 1.1424954792248865 0.81309118039243 1.0 11.951434641268731 -9.95540064990438 1.0644351789258752 1.020284991518709 1.1855098848286605 0.358748599477831 0.12821609854592358 0.494865716211564 1.134979678455762 0.04217221822651921 0.023804389446670116 1.1081520395118935e-10 9.95540064990438 0.16522489330995138 AEGEPQEES(ph)PLK ddPTM_A549_PD325901_60min_R1 2 AEGEPQEESPLK 12 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(1)PLK;AEGEPQEES(1)PLK 169.04 1.3272999999999999e-15 67833000.0 4363.9 3936.2999999999997 3615.1000000000004 3407.3 4913.5 3640.2 4021.2999999999997 4364.5 4184.4 4321.6 3763.6 True False 4806.919915466612 4268.025815446053 3860.4424253622888 3617.761182460248 4568.392710654785 3610.555418104463 4174.332772039795 4277.446623615987 4008.54421964297 4048.733438471131 3300.701059426087 1.4563330119639555 1.2930664542484076 1.1695825692356179 1.0960584182953212 1.3840673930795537 1.0938753171219489 1.264680653256618 1.29592063825366 1.2144523685946766 1.2266283330654335 1.0 11.688556765963167 -14.873483752390612 0.17806415484684218 8.261760753478027e-11 1.3012935061041517 0.04304456125143519 0.12431717261596995 32.60256560685018 0.37456307532734273 11.326302426082972 0.12023775887425167 1.3381852777403196e-15 14.873483752390612 1.301293506021534 AEGEPQEES(ph)PLKSK ddPTM_A549_MK2206_60min_R1 2 AEGEPQEESPLKSK 14 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(0.992)PLKS(0.008)K;AEGEPQEES(0.993)PLKS(0.007)K 201.18 5.134999999999999e-32 340650000.0 32526.0 37071.0 35095.0 31573.0 44868.0 34651.0 32306.0 33868.0 48398.0 48161.0 47646.0 True False 38015.59361564878 38957.75555695678 40071.998719560026 39308.386417365815 38267.97663628022 38317.74582052778 38175.58202436265 38668.8927164 37435.93027572466 37281.39665073286 35814.183237296704 1.061467557804293 1.087774508183852 1.1188862930100065 1.0975647875847763 1.0685145709655093 1.0699042210914886 1.0659347379617692 1.079708909182394 1.045282256688157 1.040967384449751 1.0 15.128243420498457 -9.38576015769899 0.39992705853152616 0.9947461006290629 1.0923840611961082 0.5918215723278284 0.019166874294964276 0.3404739635731515 0.1315903343749194 0.012802412465124473 0.006836124847325211 4.1137684425169994e-10 9.38576015769899 0.09763796056704532 AEGEPQEES(ph)PLKSK ddPTM_A549_PD325901_60min_R1 2 AEGEPQEESPLKSK 14 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(0.999)PLKS(0.001)K;AEGEPQEES(0.994)PLKS(0.006)K 165.74 2.484e-20 634730000.0 27281.0 26766.0 26739.0 25877.4 30393.0 29030.0 27810.0 30468.0 28723.0 29804.0 28567.0 True False 30050.54703678928 29021.664755285175 28553.66933466911 27475.788226160526 28258.300530157907 28793.589304865833 28868.324768215905 29860.291838316385 27515.87219692309 27922.170353617537 25053.440101133245 1.1994579153794533 1.1583904101845253 1.1397105235610954 1.0966872459530104 1.1279209727721062 1.1492868519706165 1.152269893942034 1.1918639403522757 1.0982871847478728 1.114504444934671 1.0 14.61272109379198 -9.795396310917678 0.7173049557503639 1.007111772184438 1.1495677708289938 0.3067194279372786 0.04324998219899135 0.22029035478734024 0.23742060345484073 0.014402622247850593 0.007169511052993892 1.6017830330956008e-10 9.795396310917678 0.14245599864455571 AEGEWEDQEALDYFS(ph)DK ddPTM_A549_PD325901_60min_R1 1 AEGEWEDQEALDYFSDK 17 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDY(0.158)FS(0.842)DK 52.522 0.015588999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AEGEWEDQEALDYFS(ph)DKESGK ddPTM_A549_MK2206_60min_R1 2 AEGEWEDQEALDYFSDKESGK 21 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(0.998)DKES(0.002)GK 288.64 7.025899999999997e-145 424290000.0 46904.0 41662.0 30187.9 29255.2 62637.0 49427.0 44343.0 45155.0 67151.0 62914.0 64830.0 True False 54820.248507298485 43782.417847210265 34468.99815205033 36422.725313315816 53423.18027473216 54657.33233301277 52399.5491149109 51555.859531387825 51941.40571811208 48701.68370432933 48730.921783023645 1.1249581682732743 0.8984524865372588 0.7073331858060249 0.7474253303783056 1.096289138805972 1.1216149896851264 1.0752833559812796 1.057970127487888 1.0658818634579341 0.999400009734589 1.0 15.572549892028771 -6.773819608966696 24.999381043869466 1.0479656770269303 0.860020930916999 0.42753122732536597 0.10498750858972979 166.71216460562167 336641.8348766324 0.015477284589618159 0.029395962614679853 1.6833731313416317e-07 6.773819608966696 -0.18794474610993128 AEGEWEDQEALDYFS(ph)DKESGK ddPTM_A549_PD325901_60min_R1 2 AEGEWEDQEALDYFSDKESGK 21 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK 234.89 2.1108999999999994e-86 1132810000.0 31571.0 27520.6 26723.2 28184.7 26540.9 26162.0 24155.3 23565.3 32801.0 31387.0 37240.0 True False 34776.06467865817 29839.85754555411 28536.797051655984 29925.604906902056 24676.75874513434 25948.94534598345 25074.54315978734 23095.271604879785 31422.48803855012 29405.219463461075 32659.716083810068 1.0647999691551884 0.9136594289117594 0.8737613327202841 0.9162849067673507 0.755571747219413 0.7945245230973318 0.7677514126406378 0.7071485724374827 0.9621176117365803 0.9003513499015903 1.0 14.995224628922431 -8.968901661244836 23.769087208382015 0.9832873363289227 0.8459788340844645 0.17713340071987327 0.0960824516330362 97.06009444264076 74185.74583763003 0.016828332184771463 0.01774258778016784 1.0742326268984816e-09 8.968901661244836 -0.13730850224445823 AEGEWEDQEALDYFS(ph)DKESGKQK ddPTM_A549_PD325901_60min_R1 2 AEGEWEDQEALDYFSDKESGKQK 23 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDYFS(1)DKESGKQK;AEGEWEDQEALDYFS(0.991)DKES(0.009)GKQK 162.91 6.7164e-34 37950000.0 5151.2 4675.4 6813.2 6678.5 5271.6 9101.4 7028.6 7218.6 8545.1 8632.8 9325.6 True False 5674.146031886985 5069.412366317724 7275.584723099877 7091.015777026023 4901.341002032722 9027.281215959554 7296.077219197497 7074.619360117847 8185.979163385701 8087.723534717135 8178.610319849059 0.6937787484648987 0.619837865855343 0.8895869149606521 0.8670196402213343 0.5992877530963205 1.1037671270448985 0.8920925357563863 0.8650148476872795 1.0009009896851007 0.9888872581554171 1.0 12.997640011082908 -5.81260075510372 0.31483351281901745 1.0153902874703924 0.47359895385894835 0.45325029845397813 0.11593493145534875 3.0898569382745813 0.2767207004036735 0.0424613784061084 0.6079102249855308 1.5395693088557412e-06 5.81260075510372 -0.541791333611444 AEGLEEADTGASGCHSHPEEQPTS(ph)ISPSR ddPTM_A549_MK2206_60min_R1 2 AEGLEEADTGASGCHSHPEEQPTSISPSR 29 0 Q9BV36;Q9BV36-4;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 AEGLEEADTGASGCHSHPEEQPT(0.11)S(0.541)IS(0.29)PS(0.06)R;AEGLEEADTGASGCHSHPEEQPT(0.097)S(0.586)IS(0.279)PS(0.038)R 138.15 9.654499999999999e-28 20373700.0 529.81 562.63 171.77 515.26 591.05 675.49 718.79 671.5699999999999 818.26 694.17 973.24 True False 619.2289753891314 591.2654638129691 196.12956888613263 641.4987231309005 504.10732795920063 746.9699034460273 849.3848388315369 766.7671040968686 632.9254164927161 537.3565148779967 731.5576479424641 0.8464527397543288 0.8082281218382823 0.2680985831229502 0.8768942884202524 0.6890876329118056 1.0210677252119649 1.1610634393891808 1.0481294348482755 0.8651750388678797 0.7345374850352996 1.0 9.514827745353417 -7.254533791918681 23.784466958683858 0.9681901133045417 0.6899724763611507 0.359433820506462 0.1819072175469942 228.36735388990422 786548.6457052917 0.02503492315490508 0.042717247955687515 5.565013318904812e-08 7.254533791918681 -0.2782176369433911 AEGLEEADTGASGCHSHPEEQPTSIS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 AEGLEEADTGASGCHSHPEEQPTSISPSR 29 0 Q9BV36;Q9BV36-4;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 AEGLEEADTGASGCHSHPEEQPT(0.001)S(0.038)IS(0.865)PS(0.096)R;AEGLEEADTGASGCHSHPEEQPT(0.002)S(0.009)IS(0.813)PS(0.177)R 238.36 4.2556e-120 29192000.0 875.27 815.88 831.7 880.79 971.4300000000001 876.08 1212.0 954.26 909.88 1116.24 1065.66 True False 964.1267660602813 884.6370709311093 888.1441634183884 935.1943978807735 903.2001080515682 868.9454949433978 1258.1233232318486 935.2265356975125 871.6409077929321 1045.76041590129 934.5905757753233 1.0316033470169066 0.9465503867265372 0.9503029309723099 1.000646081954068 0.9664125997657167 0.929760600488115 1.3461759147187282 1.0006804690082196 0.9326446578704595 1.1189503115134043 1.0 9.86819067920218 -4.921298000605821 16.812608466977807 0.9906260578611695 1.894076374946798 0.0 0.11847268008809379 28167971.37493639 80682198.92345093 0.015077209844804332 927874467.6752464 1.1986765229267698e-05 4.921298000605821 0.9034503170856284 AEGS(ph)PNQGK ddPTM_A549_PD325901_60min_R1 1 AEGSPNQGK 9 0 Q9P2E9;A0A087WVV2;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEGS(1)PNQGK 124.6 8.514799999999999e-05 57376000.0 12707.0 13004.0 11804.0 10361.0 12951.0 9580.0 7379.3 10076.0 11549.0 15164.0 17644.0 True False 13997.005285601004 14099.892717541961 12605.090423218297 11000.975438461724 12041.3664385245 9501.983656238883 7660.123299607906 9875.02627553092 11063.635692729345 14206.542452095568 15473.89985453128 0.9045557627479545 0.911204857863484 0.8146033347583738 0.7109374845307834 0.7781727005941802 0.6140652159808557 0.4950350830508163 0.6381730764942994 0.7149869003119818 0.91809709159617 1.0 13.917549221568493 -10.555667925434193 0.953063090877748 0.9930161133983442 0.7287696814597235 0.3450585155954011 0.11920673891345852 0.45758210109233616 0.7702008982104843 0.07735304009381395 0.02395330568559844 2.7818395325615772e-11 10.555667925434193 -0.26424643193862063 AEGS(ph)PNQGKK ddPTM_A549_MK2206_60min_R1 2 AEGSPNQGKK 10 1 Q9P2E9;A0A087WVV2;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEGS(1)PNQGKK;AEGS(1)PNQGKK 76.07300000000001 0.00062698 60812000.0 25652.0 19730.5 14724.1 11323.400000000001 6443.8 4344.0 4164.1 4028.5 7538.7 32009.0 32081.0 True False 29981.430468813338 20734.69817422069 16812.198784632386 14097.63350832675 5495.9255560502415 4803.679196686174 4920.6630690165475 4599.552211763828 5831.196486830148 24778.144668784018 24114.402309442856 1.2432997543991806 0.8598470701511552 0.6971849672612026 0.5846146766327407 0.22791050284079054 0.19920374285225895 0.20405494632930157 0.1907388021789248 0.2418138509925554 1.0275247277881423 1.0 14.557607431992661 -5.454458822029028 1.3669477941346015 0.5088014823929101 1.388747183566058 0.3922465536614408 0.2958387246076436 0.93349306085321 1.960542723842576 0.05234290352945497 1.0197017130558985 3.5118922121842148e-06 5.454458822029028 0.879945701173148 AEGS(ph)PNQGKK ddPTM_A549_PD325901_60min_R1 1 AEGSPNQGKK 10 1 Q9P2E9;A0A087WVV2;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEGS(1)PNQGKK 45.973 0.032394 1841600.0 672.51 492.16 522.43 527.14 516.36 350.89 306.99 482.08 559.99 636.68 1052.3 True False 740.7827201243049 533.6360504356701 557.8852414267991 559.7002405781981 480.09265494529444 348.03246817720856 318.6726724413737 472.4645362155562 536.4555677176818 596.4799161435118 922.873771079305 0.8026912708310652 0.5782329795889424 0.60450871929576 0.6064754012064143 0.5202148657706719 0.3771181705274634 0.34530472360124026 0.511949251372706 0.5812881290258088 0.6463288207291078 1.0 9.849989522053516 -10.349069041753884 0.7804580401695518 0.9941608689722845 0.5389422045097984 0.23016714311494768 0.1525953566692867 0.30547682910311363 0.34580288686636773 0.07772330767367093 0.025062548254975846 4.476421348289449e-11 10.349069041753884 -0.45521866446248616 AEGSPS(ph)EGK ddPTM_A549_PD325901_60min_R1 1 AEGSPSEGK 9 0 Q9P2E9;A0A087WVV2;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEGS(0.364)PS(0.636)EGK 90.306 0.0010655 8627400.0 4438.1 4025.6 3685.5 3666.9 4569.7 3349.9 2752.5 3250.0 3563.1 4488.2 6190.0 True False 4888.652644843462 4364.851439844428 3935.62019271188 3893.3960848658685 4248.740036609172 3322.6195250558035 2857.2478937257933 3185.1762004243233 3413.355298014019 4204.814286038995 5428.669241642974 0.9005250508435697 0.80403709372491 0.7249696044330698 0.7171916194488102 0.7826485364069263 0.6120504634115856 0.5263256548783682 0.5867324124282689 0.628764646744434 0.7745570965687381 1.0 12.406382870577902 -10.763105065181772 1.038827831805344 0.9980762075710436 0.6920464326458202 0.1957205471494987 0.12047420850424849 0.34269888953621785 0.663130909563376 0.07532058991232952 0.01963928362062228 1.7254204251609255e-11 10.763105065181772 -0.30602977492522343 AEGSSTASSGS(ph)QLAEGK ddPTM_A549_MK2206_60min_R1 2 AEGSSTASSGSQLAEGK 17 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 AEGSSTAS(0.003)S(0.253)GS(0.744)QLAEGK;AEGSSTASS(0.002)GS(0.998)QLAEGK 206.95 3.3965e-49 7192300.0 2628.8 3246.3 2991.0 2533.5 3663.5 2561.6 2540.3999999999996 3119.0 4317.9 4008.8 4239.5 True False 3072.4771720106232 3411.522803931611 3415.168775329932 3154.2076137331364 3124.604003009106 2832.666811747538 3001.9577965297726 3561.1278015368953 3339.9025442694237 3103.2092957674836 3186.715145752409 0.9641518088323475 1.0705452630364058 1.0716893789148458 0.9897990468138949 0.9805093521377046 0.8888986565125583 0.9420226343515828 1.1174917238158368 1.0480706280638854 0.9737956340100774 1.0 11.637854349847139 -13.115260302299504 14.959301938834269 0.25396809370273343 1.014728622369621 0.0 0.06423975591378313 0.0 0.0 0.0 0.008471118387876283 7.669016950981976e-14 13.115260302299504 0.7607605286668876 AEGT(ph)PNQGK ddPTM_A549_MK2206_60min_R1 2 AEGTPNQGK 9 0 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEGT(1)PNQGK;AEGT(1)PNQGK 121.29 0.00013609 27551000.0 12476.3 10542.1 7592.6 6135.2 2853.5 2504.92 2285.18 2180.5 2463.1000000000004 18012.5 18033.1 True False 14581.994423750819 11078.647861050249 8669.344849070563 7638.324275419592 2433.7539300085937 2769.988971768674 2700.367626150964 2489.592552501187 1905.2117827624581 13943.463739775441 13554.983581759123 1.0757662918436683 0.8173117875228365 0.6395688195990779 0.5635067153971657 0.17954680028411726 0.20435207132941388 0.19921585370157407 0.18366621674491881 0.1405543408644399 1.0286595815976565 1.0 13.726535745286562 -5.627200137532466 1.4932643772172605 0.4703143289450858 1.1141462481988913 0.3038248627446427 0.30494062199463073 0.769594303064827 2.4698124690982626 0.05410342657488602 0.5961358382713826 2.359390695871601e-06 5.627200137532466 0.6438319192538056 AEGT(ph)PNQGK ddPTM_A549_PD325901_60min_R1 2 AEGTPNQGK 9 0 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEGT(1)PNQGK;AEGT(1)PNQGK 125.17 8.231200000000001e-05 65925000.0 15765.8 15677.400000000001 13354.3 12799.9 15655.5 12400.2 8286.1 11955.7 13679.5 14904.9 18959.3 True False 17366.332409831462 16998.58951784009 14260.603103929518 13590.520752317936 14555.911688542994 12299.216882473207 8601.432069827906 11717.234184434796 13104.59818674267 13963.802070313854 16627.426292904947 1.0444389951824242 1.0223223497369236 0.8576554695067046 0.8173556456008539 0.8754157999036878 0.7396945664237513 0.5173038760363174 0.7046931965312413 0.7881314856487744 0.8398053808407088 1.0 14.021277255221205 -5.762536333529311 4.2187721761209955 0.8389561646297611 1.0398933507883095 0.3201149049442715 0.12123676974470284 0.2433812804385096 9.941300579154627 0.021169015564578796 0.08153633850248933 1.7276814348307746e-06 5.762536333529311 0.2009371861585484 AEGT(ph)PNQGKK ddPTM_A549_PD325901_60min_R1 2 AEGTPNQGKK 10 1 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AEGT(1)PNQGKK;AEGT(1)PNQGKK 62.14 0.0044313 37606000.0 8747.1 8741.099999999999 6616.9 6976.7 7556.0 7391.6 4269.4 5215.8 7184.6 8733.1 11978.4 True False 9635.099152725319 9477.743173893115 7065.962624652084 7407.634913764684 7025.292626784887 7331.405260277168 4431.874353305323 5111.766777284052 6882.65624711951 8181.69057559983 10505.132737333788 0.9171801436152739 0.9022011821145798 0.6726200231188542 0.7051443421975025 0.6687485824732103 0.6978879223698305 0.4218770446902641 0.48659706689069626 0.6551708026172294 0.7788279101436989 1.0 13.35880677081156 -10.576126597303956 0.9869703415860106 0.9903815447008749 0.6773291927959502 0.17321994069069613 0.15191813787384478 0.43102840818534094 0.7816048035578973 0.08793395703649344 0.02747124475952031 2.6538318544010976e-11 10.576126597303956 -0.31305235190492475 AEHLES(ph)PQLGGK ddPTM_A549_PD325901_60min_R1 1 AEHLESPQLGGK 12 0 D6RAG4;Q9NYD6 D6RAG4 HOXC10 Homeobox protein Hox-C10 1 AEHLES(1)PQLGGK 69.71600000000001 0.0010665 3288100.0 767.66 828.44 748.36 881.52 881.86 817.19 847.1 930.24 982.85 922.88 1308.2 True False 845.5922780785766 898.2555462104324 799.1482098542564 935.969488322823 819.9211958518423 810.5350755784815 879.3368540509063 911.6856334408377 941.5442324529427 864.6091993003134 1147.2996933630598 0.7370282437711689 0.7829301719565456 0.6965470438780709 0.8158020905411661 0.7146530244843189 0.7064719708959165 0.7664404158196202 0.7946359950366843 0.8206611035456746 0.7536036175220264 1.0 10.164026580682973 -9.999023979106925 0.46913668462113367 1.0194783683167032 0.7390214843586701 0.026836891179459865 0.07920965514571039 0.2604962829760764 0.10893588394706526 0.031754303749580555 0.009947923903810647 1.0022498983902633e-10 9.999023979106925 -0.28045688395803314 AEHMETNAVGPS(ph)PSSDTR ddPTM_A549_MK2206_60min_R1 13 AEHMETNAVGPSPSSDTR 18 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AEHMETNAVGPS(0.67)PS(0.148)S(0.148)DT(0.034)R;AEHMET(0.063)NAVGPS(0.785)PS(0.126)S(0.021)DT(0.005)R;AEHMETNAVGPS(0.654)PS(0.129)S(0.171)DT(0.046)R;AEHMET(0.001)NAVGPS(0.976)PS(0.018)S(0.004)DT(0.001)R;AEHMET(0.001)NAVGPS(0.84)PS(0.115)S(0.034)DT(0.01)R;AEHMET(0.002)NAVGPS(0.93)PS(0.033)S(0.034)DT(0.001)R;AEHMET(0.002)NAVGPS(0.579)PS(0.154)S(0.196)DT(0.069)R;AEHMET(0.001)NAVGPS(0.982)PS(0.009)S(0.007)DT(0.001)R;AEHMET(0.001)NAVGPS(0.624)PS(0.164)S(0.164)DT(0.046)R;AEHMETNAVGPS(0.577)PS(0.199)S(0.199)DT(0.025)R;AEHMETNAVGPS(0.998)PS(0.001)S(0.001)DTR;AEHMET(0.001)NAVGPS(0.593)PS(0.155)S(0.189)DT(0.061)R;AEHMETNAVGPS(0.978)PS(0.018)S(0.003)DTR 155.79 1.5003999999999998e-22 237602000.0 7959.13 8532.13 7787.210000000001 8214.06 10547.59 8846.399999999998 8199.65 8274.49 12353.41 12531.239999999998 12791.920000000002 True False 9302.436561954088 8966.37897332625 8891.5534733992 10226.50506874317 8996.053483307982 9782.520176234932 9689.420267011245 9447.424297062851 9555.38235934212 9700.42418067584 9615.33322496831 0.9674585731255035 0.9325083971133825 0.9247265035298353 1.0635622114673904 0.9355945626458131 1.0173875358612101 1.0077050935531335 0.9825373781670461 0.9937650766516845 1.0088495066906857 1.0 13.231121140529806 -6.212531063601866 24.999790791643598 0.9973456938751079 0.940658858873972 0.4300376540783951 0.030326729368452165 252.58632728973862 129110.67371458124 0.0036236089183080003 0.009587156233434022 6.130119439297933e-07 6.212531063601866 -0.056686835001135805 AEHMETNAVGPS(ph)PSSDTR ddPTM_A549_PD325901_60min_R1 9 AEHMETNAVGPSPSSDTR 18 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AEHMETNAVGPS(0.942)PS(0.041)S(0.013)DT(0.004)R;AEHMET(0.001)NAVGPS(0.978)PS(0.018)S(0.003)DTR;AEHMET(0.001)NAVGPS(0.633)PS(0.131)S(0.172)DT(0.062)R;AEHMETNAVGPS(0.954)PS(0.04)S(0.007)DTR;AEHMETNAVGPS(0.929)PS(0.048)S(0.019)DT(0.003)R;AEHMETNAVGPS(0.98)PS(0.018)S(0.002)DTR;AEHMETNAVGPS(0.541)PS(0.336)S(0.111)DT(0.012)R;AEHMETNAVGPS(0.964)PS(0.024)S(0.01)DT(0.001)R;AEHMETNAVGPS(0.824)PS(0.11)S(0.053)DT(0.012)R 164.53 1.3315999999999998e-23 263938000.0 9334.36 9514.3 9070.76 9417.61 10422.789999999999 9487.94 10922.73 10118.73 8822.51 9201.399999999998 11389.14 True False 10281.977355607352 10316.10345143876 9686.356320510986 9999.314380755864 9690.729187073493 9410.673362356478 11338.400467297191 9916.903992159878 8451.73058580497 8620.422033679253 9988.347981706887 1.0293971910508355 1.0328137816515943 0.9697656047077071 1.0010979192023608 0.9702034014855644 0.9421651487905318 1.135162740431436 0.9928472666673352 0.8461590046005457 0.8630478282762158 1.0 13.286030368517086 -8.546324284210325 24.708009931499888 0.9269397031698545 1.010209766970039 0.36435980421062863 0.06059341367255503 221.82922863825993 233772.8819478014 0.011875985980894847 0.013466541918141204 2.842337963892924e-09 8.546324284210325 0.08327006380018442 AEHRLS(ph)R ddPTM_A549_PD325901_60min_R1 1 AEHRLSR 7 1 G5E9Y3;Q8WWN8;Q05CH1 G5E9Y3 ARAP3 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 1 AEHRLS(1)R 45.161 0.020499 13156000.0 883.57 780.85 835.05 833.58 1039.1 736.38 935.39 1035.2 775.02 1086.7 910.41 True False 973.2693759501445 846.6549698933137 891.7215145635756 885.0683434024626 966.1172007003943 730.3831654260108 970.9867783150478 1014.5521239013109 742.4486046046494 1018.0855765426178 798.4353415644873 1.218970811140549 1.0603926527529992 1.1168362272345054 1.1085034658764266 1.210013072326363 0.9147680812761466 1.2161119727146046 1.2706753710492766 0.929879435384041 1.2751008422895442 1.0 9.641031770634482 -8.786109626951271 24.999753196398114 0.96688748996743 1.1325147151561639 0.0 0.13158358416452148 161.06876630876084 163219.25742286444 0.015765886859049293 0.01678760561495932 1.6364033995326182e-09 8.786109626951271 0.16562722518873385 AEHRLS(ph)RQDLEAR ddPTM_A549_MK2206_60min_R1 2 AEHRLSRQDLEAR 13 2 G5E9Y3;Q8WWN8;Q05CH1 G5E9Y3 ARAP3 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 1 AEHRLS(1)RQDLEAR;AEHRLS(1)RQDLEAR 84.14 8.2137e-05 11072700.0 1370.05 1574.25 1217.62 1244.45 1270.55 923.06 1127.95 1138.83 1372.13 1960.08 2107.47 True False 1601.2809454934395 1654.3726008345923 1390.2968252147214 1549.3403058654828 1083.653778087408 1020.7375965223622 1332.8839145787108 1300.262640020604 1061.3447458413593 1517.296566665319 1584.127035786964 1.010828620002659 1.0443433913194542 0.8776422558333831 0.9780404417476534 0.684069997927325 0.6443533715812629 0.8413996380767277 0.8208070506003696 0.6699871423595164 0.9578124306877669 1.0 10.62947231865981 -6.147266669559182 1.605669443614103 0.8171835540640483 1.0235623792531614 0.3181486252031904 0.11548309078911681 0.4688963391062556 2.2317561826714427 0.020811158119461555 0.08786814012920524 7.124154517992698e-07 6.147266669559182 0.2063788251891131 AEHRLS(ph)RQDLEAR ddPTM_A549_PD325901_60min_R1 2 AEHRLSRQDLEAR 13 2 G5E9Y3;Q8WWN8;Q05CH1 G5E9Y3 ARAP3 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 1 AEHRLS(1)RQDLEAR;AEHRLS(1)RQDLEAR 105.53 2.0979e-05 24860000.0 2910.4 2999.8 2932.3 3079.7 3521.1000000000004 3358.7 2746.5 3512.8999999999996 2798.8 3444.8 4335.8 True False 3205.8616654767598 3252.603673799016 3131.3035113523415 3269.9260744938297 3273.790083135558 3331.347860773437 2851.019560442467 3442.8324536832606 2681.176169089175 3227.294740106755 3802.524086900742 0.8430877996330344 0.855380163140547 0.8234802567429675 0.8599356637235642 0.8609518331293121 0.8760885623971579 0.749770282919154 0.9054071387853722 0.705104322238357 0.8487243384530854 1.0 11.892741671321179 -11.08407681150846 1.4205872858819033 0.9996366737382437 0.8179651772705988 0.06533249635541472 0.07035100499231692 0.26289560388738403 0.9506784067892537 0.04489854758509375 0.009944175515911856 8.239923666862523e-12 11.08407681150846 -0.1816714964676449 AEIDMLDIR ddPTM_A549_MK2206_60min_R1 4 AEIDMLDIR 9 0 Q6P452;P09525;P09525-2 Q6P452 ANXA4 Annexin;Annexin A4 0 ;;; 114.93 0.00058574 5395210.0 1779.53 1800.81 1708.71 1477.4099999999999 2433.1099999999997 1789.33 1198.3000000000002 1785.75 2385.26 2262.96 2519.5499999999997 False True 2079.8711586686177 1892.4635371185905 1951.0307716797095 1839.375516323455 2075.2027421213284 1978.675712938874 1416.0155989535624 2038.8855311300135 1845.0024184775207 1751.755764306023 1893.8761989575378 1.0982086156494595 0.9992540896602825 1.0301786213658695 0.9712226793577732 1.0957436094627515 1.044775637408619 0.7476811840884804 1.0765674822104498 0.9741937828317822 0.9249579065781895 1.0 10.887126310828688 AEIDMLDIR ddPTM_A549_PD325901_60min_R1 6 AEIDMLDIR 9 0 Q6P452;P09525;P09525-2 Q6P452 ANXA4 Annexin;Annexin A4 0 ;;;;; 109.86 0.0010675 3033950.0 1238.22 1279.66 1157.0900000000001 1578.49 1851.5600000000002 1551.71 1483.3600000000001 1450.6399999999999 1471.32 1553.81 1843.62 False True 1363.923182870614 1387.5014391671605 1235.6170855474138 1675.9897422891065 1721.5128131352342 1539.0733882278112 1539.8100765257373 1421.7058471949342 1409.485537053124 1455.7021714251264 1616.8664276700829 0.8435595912743626 0.8581422778173216 0.7642048003482561 1.0365666041468997 1.064721725724708 0.9518865392273794 0.9523421664117397 0.8792970296523649 0.871739008821034 0.9003230857621335 1.0 10.658984784687282 -6.2542676276629265 24.991062414727303 0.9498927111826655 0.8255862305263669 0.48445612176553277 0.061731316560929304 462.1768168414192 1610520.15177087 0.010036013377801686 0.025958627408375463 5.568424970845036e-07 6.2542676276629265 -0.12430648065629857 AEIEKS(ph)PGGGR ddPTM_A549_MK2206_60min_R1 3 AEIEKSPGGGR 11 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 AEIEKS(1)PGGGR;AEIEKS(1)PGGGR;AEIEKS(1)PGGGR 103.32 5.9756e-05 151716100.0 16511.4 17408.3 16448.4 15599.0 20245.1 16671.6 15622.099999999999 16214.300000000001 23033.4 23128.9 22794.6 True False 19298.120655027462 18294.30811313885 18781.03045273717 19420.75570026572 17267.072608521812 18435.777646287577 18460.433354262215 18512.726679211184 17816.371676781604 17904.065426281333 17134.071721044438 1.1263009148797418 1.067715159069247 1.096121853492063 1.133458293886603 1.0077623631815442 1.0759717798802229 1.077410766968409 1.0804627750258249 1.0398212384566565 1.0449393301121281 1.0 14.064580412099685 -9.830998512186866 0.1012667290390225 0.8931120988039368 1.1725413355428258 0.3530235908706809 0.03286143624634681 9.429504053335826 0.3780067119662465 0.6410330904841293 0.37624581150186 1.4757115887841127e-10 9.830998512186866 0.279429236738889 AEIIADK ddPTM_A549_PD325901_60min_R1 2 AEIIADK 7 0 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 0 ; 101.99 0.029883999999999997 3649500.0 2472.4 2737.1 2884.0 2737.8 3876.3 3575.7 3091.3 2851.0 3202.6 3218.2 3764.8 False True 2723.3962279153175 2967.7650228532866 3079.7255829008445 2906.907688005065 3604.0420605090358 3546.580684719556 3208.9411131242673 2794.1345684337657 3068.0058593414997 3015.0023027785523 3301.753467033515 0.824833306031832 0.8988451295607172 0.9327545541029891 0.8804133067563031 1.0915539565548225 1.0741506657388347 0.9718899806312203 0.8462577828211314 0.9292050087852175 0.9131518548801294 1.0 11.68901668681321 -5.523064258492156 1.1550769155209162 0.9696059720452938 0.7999139275717084 0.26601018693717005 0.0701354701078344 1.1207781509385675 1.6437451668205207 0.010819509007235663 0.2034882997421025 2.998718793791213e-06 5.523064258492156 -0.16969204447358532 AEIKEMLAS(ph)DDEEDVSSK ddPTM_A549_PD325901_60min_R1 4 AEIKEMLASDDEEDVSSK 18 1 E7ETM8;Q0ZGT2-4 E7ETM8 NEXN Nexilin 1 AEIKEMLAS(1)DDEEDVSSK;AEIKEMLAS(1)DDEEDVSSK;AEIKEMLAS(1)DDEEDVSSK;AEIKEMLAS(1)DDEEDVSSK 146.5 2.1096999999999998e-17 21152600.0 12472.099999999999 13965.7 14374.300000000001 14012.7 15179.8 16488.4 14772.300000000001 15840.599999999999 15639.5 15008.0 15301.5 True False 13738.258410525252 15142.638551628414 15349.826437687809 14878.23265384929 14113.62321546709 16354.123937111595 15334.467960212725 15524.646806289704 14982.22620282627 14060.39231871869 13419.512504200311 1.0237524206803468 1.128404518933811 1.1438438194296037 1.1087014263142867 1.051723988561397 1.2186824172631272 1.1426993309490963 1.156871145761106 1.1164508545401206 1.0477573096875004 1.0 13.71204464270102 -10.405038406443706 0.8233297719727438 1.0019950316363653 1.1237068652586126 0.34058434864471343 0.05074440593049884 0.4172855603117814 0.52441372677563 0.02939368626945193 0.009383601291804572 3.9351527374603056e-11 10.405038406443706 0.12171183362224736 AEIKEMLAS(ph)DDEEDVSSKVEK ddPTM_A549_MK2206_60min_R1 2 AEIKEMLASDDEEDVSSKVEK 21 2 E7ETM8;Q0ZGT2-4 E7ETM8 NEXN Nexilin 1 AEIKEMLAS(1)DDEEDVSSKVEK;AEIKEMLAS(1)DDEEDVSSKVEK 113.6 1.5630000000000001e-12 10334000.0 2372.1 2993.8999999999996 2973.9 2582.6 3747.2 2545.1 2196.88 2585.3 3975.2000000000003 4022.6 4083.3 True False 2772.4524877230688 3146.276722019176 3395.643738199161 3215.3371159373214 3195.991843885823 2814.420792699352 2596.024659124676 2951.774192149196 3074.823547089977 3113.891866182968 3069.303916653099 0.9032837943093854 1.025078261213706 1.106323723687134 1.0475786051983615 1.0412757845664466 0.9169573522612637 0.8458024130616212 0.9617080198978594 1.0017983329728055 1.0145270558864987 1.0 11.58369579046644 -7.159474210392514 19.528132653886217 0.9794103406278233 1.030535927060636 0.16695871955128216 0.0650849030890105 11.882558814292567 2266.3486156409613 0.010277005987198959 0.01780037495065784 6.926690608206849e-08 7.159474210392514 0.05112558643281273 AEIKEMLAS(ph)DDEEDVSSKVEK ddPTM_A549_PD325901_60min_R1 2 AEIKEMLASDDEEDVSSKVEK 21 2 E7ETM8;Q0ZGT2-4 E7ETM8 NEXN Nexilin 1 AEIKEMLAS(1)DDEEDVSSKVEK;AEIKEMLAS(1)DDEEDVSSKVEK 100.93 2.6579e-10 12992600.0 3308.5 3428.3 3364.1000000000004 4543.3 4156.4 3930.3999999999996 4940.8 4815.9 4709.9 4458.200000000001 4092.1 True False 3644.376484411031 3717.214872619896 3592.408055976676 4823.929322417054 3864.468802801577 3898.3921255199657 5128.8248477095 4719.843096499534 4511.959282118445 4176.708491158828 3588.79764195916 1.0154867585182457 1.0357828006682015 1.0010060232918414 1.3441630884999198 1.0768143507506112 1.0862669101041302 1.4291206580568372 1.3151599971301042 1.2572342417320923 1.1638183335627477 1.0 11.809284862267862 AEIS(ph)FEDR ddPTM_A549_MK2206_60min_R1 2 AEISFEDR 8 0 Q60FE5;P21333-2;P21333;H0Y5C6 Q60FE5 FLNA Filamin-A 1 AEIS(1)FEDR;AEIS(1)FEDR 75.378 0.0048503 2384810.0 245.66 431.46999999999997 218.4 278.13 777.51 429.39 380.86 401.09000000000003 617.24 375.61 535.85 True False 287.1214021896415 453.4299800426246 249.3724040561876 346.27186248572997 663.1393089612691 474.8277647939862 450.0573320683077 457.94573578660896 477.43612552973826 290.7594401275255 402.7836562923527 0.7128427325790995 1.1257407617192672 0.6191224498820913 0.8596969044702133 1.6463908070786821 1.1788655209220844 1.1173674130949403 1.136952129592413 1.1853413565102564 0.7218749708068677 1.0 8.653861334230776 -6.5626954020928805 24.99999932069281 1.139150856934291 0.831471146562938 0.2921503491102937 0.23369053720577243 128.6331877572021 80765.55250312375 0.0282452912518075 0.05879732278019474 2.7371878144027287e-07 6.5626954020928805 -0.307679710371353 AEIS(ph)FEDR ddPTM_A549_PD325901_60min_R1 2 AEISFEDR 8 0 Q60FE5;P21333-2;P21333;H0Y5C6 Q60FE5 FLNA Filamin-A 1 AEIS(1)FEDR;AEIS(1)FEDR 67.563 0.0079501 3297700.0 442.47 435.27 274.8 514.19 411.49 381.61 367.79 259.115 296.48 394.52 226.72 True False 487.3892286708019 471.9517304801977 293.4495805066409 545.9503484897818 382.5883619634349 378.50229468239206 381.78644971241033 253.9467480532149 284.01997663697244 369.60993987079564 198.83487729649354 2.451226038900757 2.3735862485354855 1.4758456086608096 2.7457474056509987 1.9241511708880756 1.9036011178158982 1.9201181146057575 1.2771740627502741 1.4284213136986765 1.8588788088703878 1.0 7.635427029619569 -8.171402944555398 0.42200390050633463 1.0379685129004232 2.3477555757746082 0.3907454343928549 0.3951878673088483 0.41452974671470605 0.1749977876855055 0.12249946132406195 0.18885957799541406 6.7390248130532604e-09 8.171402944555398 1.309787062874185 AEIS(ph)FEDRK ddPTM_A549_PD325901_60min_R1 2 AEISFEDRK 9 1 Q60FE5;P21333-2;P21333;H0Y5C6 Q60FE5 FLNA Filamin-A 1 AEIS(1)FEDRK;AEIS(1)FEDRK 75.788 0.00085519 22957100.0 4984.8 4778.6 5970.9 5427.9 6227.6 4918.299999999999 5199.6 5318.0 5111.700000000001 5599.7 6025.0 True False 5490.853226384192 5181.309392498161 6376.1211799385055 5763.169055344691 5790.194860053676 4878.246995457165 5397.473623330292 5211.928318109707 4896.873025415584 5246.133986349221 5283.9631956217945 1.0391543285036169 0.9805725741601133 1.2066929582745116 1.0906906127052434 1.095805297215419 0.9232174439631224 1.0214820625174963 0.9863672635775029 0.9267424552602965 0.9928407508016108 1.0 12.367404702480961 -7.250872560081055 24.555431633866363 0.9683836214263467 1.0842613103294405 0.4612316160488362 0.05757578290489661 385.617259730599 896105.6209796659 0.008708226913067246 0.01497791900007046 5.612126348137987e-08 7.250872560081055 0.1158776889030938 AEIS(ph)SIR ddPTM_A549_PD325901_60min_R1 2 AEISSIR 7 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.967)S(0.033)IR;AEIS(0.753)S(0.247)IR 121.09 0.006548399999999999 18068700.0 4919.5 4992.0 5156.700000000001 4698.6 5670.8 4498.5 5107.7 5267.1 6305.6 6376.0 6625.5 True False 5418.924018455509 5412.693359425525 5506.66467175617 4988.821850705165 5272.502571197958 4461.865707472921 5302.076318540689 5162.043558539985 6040.597560314673 5973.418271865034 5810.605502504929 0.9325919675874454 0.9315196767517834 0.9476920553946174 0.8585717699393813 0.9073929677251369 0.7678830899033549 0.9124825831412896 0.8883830706308745 1.0395814270493144 1.0280199317076193 1.0 12.504472794237584 -8.756712742235797 24.994869835062484 1.0186912323878925 0.892169777593309 0.5987978730350187 0.04707111227771866 59.12642357943124 312665.38226842094 0.008243014135329541 0.009200287774966636 1.7510044821096705e-09 8.756712742235797 -0.12652145479458354 AEIS(ph)SIRENK ddPTM_A549_PD325901_60min_R1 1 AEISSIRENK 10 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.685)S(0.315)IRENK 136.7 1.3954000000000002e-07 41685000.0 5270.9 6922.5 5257.8 5852.3 7032.5 5598.4 6162.1 7816.8 10609.0 11673.0 12703.0 True False 5805.997887768506 7505.883369515867 5614.625925719853 6213.78327946236 6538.5614608079295 5552.808486543601 6396.602087530504 7660.887791839026 10163.14062379129 10935.964787873356 11140.611530951648 0.521156120706468 0.6737406962501549 0.5039782520125484 0.5577596222791523 0.5869122572528472 0.4984294148589949 0.5741697455080454 0.6876541535044999 0.9122605698578864 0.9816305646678616 1.0 13.443540806882378 -8.678487386386136 1.8650758018328522 0.9671798748021372 0.5585685080624886 0.9339243880995494 0.04723209152174533 0.053885941964919616 0.36779266219413104 0.009059179121693507 0.010051383493722397 2.0965856724726567e-09 8.678487386386136 -0.4086113667396486 down AEIS(ph)SIRENKDR ddPTM_A549_MK2206_60min_R1 3 AEISSIRENKDR 12 2 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.595)S(0.405)IRENKDR;AEIS(0.596)S(0.404)IRENKDR;AEIS(0.5)S(0.5)IRENKDR 92.06299999999999 5.5073e-05 75760000.0 6406.0 7593.8 7019.1 6318.6 9391.5 5875.0 6136.299999999999 5957.7 8818.8 9230.4 10174.1 True False 7487.176188336904 7980.291984257728 8014.513925415688 7866.657283652732 8010.022790844826 6496.688600490624 7251.186280446248 6802.222219691045 6821.355880729796 7145.246229208782 7647.5901791248 0.9790242433197102 1.0435041362494928 1.047979002234254 1.0286452463320939 1.0473917408269782 0.8495079428058622 0.9481661687676998 0.8894595631260017 0.8919614834160008 0.9343134323165959 1.0 12.90078949856836 -7.227772213328428 24.998524180230802 0.9365486053573614 1.0310978740916932 0.6181826548348712 0.04196272457257873 462.5841651253992 343477.90488689166 0.0076410959754856225 0.013234300311983915 5.9187198856748716e-08 7.227772213328428 0.09454926873433178 AEIS(ph)SIRENKDR ddPTM_A549_PD325901_60min_R1 3 AEISSIRENKDR 12 2 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.658)S(0.342)IRENKDR;AEIS(0.617)S(0.383)IRENKDR;AEIS(0.557)S(0.443)IRENKDR 123.76 1.5695e-06 78282000.0 9636.7 8839.2 10095.3 9816.9 11898.4 11835.3 12494.9 16466.2 18596.6 22074.8 23129.6 True False 10615.01068983641 9584.110405175103 10780.42776597049 10423.26761720248 11062.697431251629 11738.91724078121 12970.400256971634 16137.768723516 17815.049573418524 20680.993360691056 20284.805830614754 0.5232986097316126 0.4724773056841553 0.5314533378328017 0.5138460631193822 0.5453686628124041 0.5787049350536203 0.6394145630615855 0.7955594378507751 0.8782459996009052 1.0195312458686865 1.0 14.308111872453512 -8.355551820681608 0.7397160843167352 0.9704141229189539 0.4991652489149759 0.9814766671859833 0.02651929185481762 0.05192633450761822 0.057657706549043036 0.0064906470363734 0.008370579952021513 4.410097380256097e-09 8.355551820681608 -0.471248874003978 down AEISS(ph)IR ddPTM_A549_MK2206_60min_R1 4 AEISSIR 7 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.001)S(0.999)IR;AEIS(0.21)S(0.79)IR;AEIS(0.063)S(0.937)IR;AEIS(0.251)S(0.749)IR 122.19 0.0064113 68308300.0 8493.7 8067.599999999999 7974.6 6907.0 11139.800000000001 8917.0 7559.400000000001 9310.0 11808.0 11626.0 10879.2 True False 9927.228908972398 8478.206380494308 9105.518193161513 8599.215310067015 9501.150176803823 9860.591021374454 8932.845129541472 10629.721010679226 9133.506853501316 8999.678525392328 8177.594389354784 1.2139546713022606 1.036760442842561 1.1134714880227685 1.0515580622659737 1.1618514839977858 1.205805833829386 1.0923561018347694 1.299859164513773 1.1168940911756269 1.100528847102969 1.0 12.997460791280524 -10.142057664633302 0.9918426122130145 1.011590764225433 1.1399149243482685 0.1401658198078516 0.07758858405516163 0.41209201493865166 0.8088437975876004 0.02886241264230714 0.013655144412818962 7.210117385285616e-11 10.142057664633302 0.12832416012283554 AEISS(ph)IR ddPTM_A549_PD325901_60min_R1 2 AEISSIR 7 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.07)S(0.93)IR;AEIS(0.002)S(0.998)IR 123.16 0.00629 38363000.0 4572.4 5071.1 5977.7 5716.700000000001 6407.2 5079.200000000001 5862.799999999999 7537.0 8227.0 10168.3 9805.8 True False 5036.586681977028 5498.4593940270015 6383.382668830227 6069.807575432305 5957.18037564004 5037.836679203394 6085.912062247256 7386.6686223378865 7881.247800163153 9526.271802667063 8599.74876408767 0.5856667235454232 0.6393744218422318 0.7422754831498182 0.7058121977678774 0.6927156291491995 0.5858120763063767 0.70768486722099 0.85894004871217 0.9164509355290752 1.1077383844570587 1.0 13.070078797721099 -8.454638102959331 1.5893205916927977 0.9657665243099804 0.6623806868436541 0.8473541379407472 0.06404257813331243 0.08979574401346917 0.4408239546173257 0.009822398215801028 0.011834548963967854 3.510442768566081e-09 8.454638102959331 -0.3033858374663263 AEISS(ph)IRENK ddPTM_A549_MK2206_60min_R1 2 AEISSIRENK 10 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.01)S(0.99)IRENK;AEIS(0.083)S(0.917)IRENK 110.15 5.4257e-05 66517000.0 18118.1 20047.9 17599.300000000003 17076.8 23526.0 18657.4 15625.2 18903.1 22371.0 23929.0 22840.0 True False 21175.992334983905 21068.252478495673 20095.14537869076 21260.61676660668 20065.356564703743 20631.713684220205 18464.096584135186 21582.67231331584 17304.004219146158 18523.422280587743 17168.19764806818 1.2334429489380148 1.2271674004677096 1.1704866049787077 1.238372087881863 1.1687514890045292 1.2017402238226067 1.0754825266246177 1.2571309321887025 1.0079103569205041 1.0789380842590695 1.0 14.06745096981095 -8.774483288243935 24.987844060948262 1.0037354196727848 1.1933240950767305 0.6668954542332904 0.0518960405936324 68.0414105070171 130344.55311454186 0.007591444862416917 0.008105636783511854 1.6808026021525287e-09 8.774483288243935 0.18958867540394575 AEISS(ph)IRENK ddPTM_A549_PD325901_60min_R1 1 AEISSIRENK 10 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.165)S(0.835)IRENK 136.38 1.4994e-07 38018000.0 6513.1 7241.8 6161.4 6958.6 7323.0 6271.3 7196.4 8827.7 11643.0 14862.0 14789.0 True False 7174.305117309198 7852.091901099308 6579.549655508065 7388.416917872767 6808.657742978524 6220.228612042885 7470.262940021183 8651.624598303317 11153.685199623153 13923.610783635217 12970.046755195133 0.5531441214300589 0.6054019734319126 0.507288044499349 0.5696522963506934 0.5249524440034363 0.47958413176509035 0.5759626839455285 0.6670465235476442 0.8599572083389414 1.073520477330441 1.0 13.662896059861234 -8.760284853812108 1.2509942199740351 0.9550467354395442 0.538169317053563 0.930014945519542 0.05219128826177137 0.06427511477406309 0.19835617872661365 0.009606791210612925 0.010222192481231598 1.7366613786635874e-09 8.760284853812108 -0.41687741838598125 down AEISS(ph)IRENKDR ddPTM_A549_PD325901_60min_R1 1 AEISSIRENKDR 12 2 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 AEIS(0.126)S(0.874)IRENKDR 78.932 0.00031059 20769000.0 2507.2 2896.4 3122.7 2676.7 3391.6 2856.8 3356.6 3760.1 4728.5 4943.4 5476.8 True False 2761.729098296913 3140.489792916686 3334.6252003205523 2842.033679773233 3153.385716384812 2833.5351679690207 3484.337249801996 3685.101855758613 4529.7775888016895 4631.27288035408 4803.188320295675 0.5749783090176457 0.6538344082089547 0.6942524377464507 0.5916973248299128 0.6565192755529301 0.5899279767974189 0.7254217443607348 0.7672199401775205 0.9430772409362548 0.9642080575489466 1.0 12.22977665859875 -8.548719141228686 1.3188179116989478 0.9819727607466056 0.6309140228277305 0.9311399172681281 0.0394219003615533 0.06129719376917696 0.20699644990222527 0.007366377398250019 0.008555976119607261 2.826707419083518e-09 8.548719141228686 -0.3510587379188751 AEITFDDHK ddPTM_A549_PD325901_60min_R1 2 AEITFDDHK 9 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95 O75369-8 FLNB Filamin-B 0 ; 129.38 5.4164e-05 11252700.0 2398.2599999999998 2443.7 2713.5 2476.71 3125.7 2863.2 2452.98 2415.5 3234.9 2905.8999999999996 3406.8 False True 2641.729589694301 2649.6391751658953 2897.6544276010536 2629.6907516834785 2906.1616150796085 2839.8830484909345 2546.32949622216 2367.3209575769074 3098.9484026677774 2722.4209780760043 2987.785197484536 0.8841765438554335 0.8868238511244612 0.9698335844359344 0.8801471919391852 0.972680906755396 0.9504977301855158 0.8522465063304936 0.7923330497687694 1.0372058892576452 0.9111836354126307 1.0 11.54486071603446 -8.798526626680077 24.99999191436027 1.0175694852204218 0.9026148359434747 0.22859387804151376 0.05994377423837923 98.44436017459589 66359.5342142803 0.0090747467871638 0.009660921822493007 1.5902791805042819e-09 8.798526626680077 -0.1149546492769471 AEKDRES(ph)LRR ddPTM_A549_PD325901_60min_R1 1 AEKDRESLRR 10 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 AEKDRES(1)LRR 53.754 0.0060532 33170000.0 5602.6 4958.2 3713.9 3256.3 5552.9 3657.6 4365.9 3590.7 3262.4 3768.9 4036.4 True False 6171.371827583871 5376.0449148044145 3965.947587494954 3457.434255406129 5162.883460465038 3627.813718273415 4532.046713612151 3519.080671650341 3125.2926733016034 3530.931010795502 3539.9483888477716 1.7433507920697706 1.5186788970542815 1.120340511175035 0.9766905829187809 1.458462919044286 1.0248210764039536 1.280257850055068 0.9941050786889515 0.8828639093009105 0.9974526809258921 1.0 11.789512611157884 -2.0000000000186806 0.34946183110939144 0.9568201059956983 10.073974574565895 0.6388300861177165 0.15974233054267192 22.57098661559162 0.27752646338923453 0.04259163317056332 137.61841206853887 0.009999999999569863 2.0000000000186806 9.117154468570197 AEKENT(ph)PSEANLQEEEVR ddPTM_A549_MK2206_60min_R1 1 AEKENTPSEANLQEEEVR 18 1 B4E3T4;Q93062-4;Q93062-5;Q93062;Q93062-2;Q93062-3 B4E3T4 RBPMS RNA-binding protein with multiple splicing 1 AEKENT(0.791)PS(0.209)EANLQEEEVR 70.994 0.00042465 14563000.0 2468.6 2437.0 1850.4 1813.7 2526.2 1660.4 2157.6 2329.9 3597.9 3714.6 3629.7 True False 2885.2393285245826 2561.032890731398 2112.8145442562704 2258.0565814200863 2154.5993264369035 1836.102425915682 2549.6079915732303 2660.1704600195 2782.981394665683 2875.4692800982584 2728.3453153762293 1.0575051890477867 0.9386762285177381 0.7743941107267504 0.8276285881755068 0.7897091743827859 0.6729728878408083 0.9344887456893074 0.975012380224558 1.0200253534556418 1.053924246279559 1.0 11.413810536521572 -7.99452594805564 24.994000927591237 1.0046427361913193 0.8383553367503912 0.4173562066448059 0.09321512232053793 112.04546809775026 511584.89707163634 0.014775086794587436 0.020380121944119103 1.012684241547791e-08 7.99452594805564 -0.16628739944092807 AEKPMDNS(ph)ESSEESSDSADSEEAPAAMTAAQAKPALK ddPTM_A549_PD325901_60min_R1 1 AEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALK 37 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AEKPMDNS(0.409)ES(0.409)S(0.057)EES(0.057)S(0.057)DS(0.009)ADS(0.002)EEAPAAMTAAQAKPALK 86.486 1.5687000000000001e-06 4708500.0 392.28 294.95 321.55 505.52 601.28 708.24 315.17 379.38 402.18 551.28 603.97 True False 432.1039768187271 319.806471627115 343.37231663722855 536.7448222807805 559.0481671033907 702.4723282562239 327.16396681764144 371.81296828214766 385.27777321862385 516.4720867179667 529.6855188812772 0.815774570789386 0.6037666883976035 0.6482569456730635 1.013327348299823 1.0554341154806892 1.3262064059064353 0.6176569967565442 0.7019504121378202 0.7273707879202553 0.975054194059868 1.0 9.048992256983277 -11.043342472652485 1.3854068439849225 0.99871659900069 0.825159185522682 0.07135316742449038 0.21064376133905802 0.9812658744245827 3.398168303327362 0.15499936083210164 0.03579477613348919 9.050186466845785e-12 11.043342472652485 -0.17355741347800802 AEKPPLSAS(ph)SPQQRPPEPETGESAGTSR ddPTM_A549_PD325901_60min_R1 1 AEKPPLSASSPQQRPPEPETGESAGTSR 28 2 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 AEKPPLS(0.009)AS(0.551)S(0.44)PQQRPPEPETGESAGTSR 85.20299999999999 2.2524999999999998e-07 17755000.0 2347.9 2966.9 2442.7 3081.6 3206.0 3354.9 2833.4 2881.9 2907.7 2685.3 3394.7 True False 2586.2570795673732 3216.931075336457 2608.476311148369 3271.943433178615 2980.8216200995694 3327.5788067135513 2941.226587495974 2824.418243693185 2785.4994807991266 2515.7496997238345 2977.173420776316 0.8686954752178968 1.0805319746867896 0.8761586721636769 1.0990100241877867 1.0012253902637294 1.1176973378480133 0.9879258517392753 0.9486912062236202 0.9356188193003518 0.8450128172472524 1.0 11.539727545877586 -7.997234833812981 24.994949712929944 0.9672340302062693 1.0121877362454674 0.09657573069120462 0.0852325271226516 185.42649658377832 1676087.619438775 0.011260661245132184 0.015510792328336255 1.0063873430676904e-08 7.997234833812981 0.04495370603919813 AEKPPLSASS(ph)PQQRPPEPETGESAGTSR ddPTM_A549_PD325901_60min_R1 1 AEKPPLSASSPQQRPPEPETGESAGTSR 28 2 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 AEKPPLS(0.002)AS(0.328)S(0.647)PQQRPPEPET(0.006)GES(0.005)AGT(0.006)S(0.007)R 81.18 7.963e-07 20435000.0 2403.2 2074.2 2123.1 2575.0 2697.3 2274.7 2513.8 2549.0 2322.0 2899.6 2798.5 True False 2647.171094857664 2249.0001134055324 2267.186333237443 2734.051901750694 2507.850953179841 2256.1755973743802 2609.4640346041433 2498.1581953481827 2224.4144149725107 2716.518761151167 2454.3022411531274 1.0785839863039521 0.9163501037870804 0.9237600386870974 1.1139833782110427 1.0218183038457211 0.9192737388017624 1.063220328307289 1.017869011183582 0.9063327155368581 1.106839538994529 1.0 11.261097208871927 -8.728569311154889 24.994804029683706 0.9557681928407807 1.0040994273931747 0.0 0.07988281925611149 350.5240435187692 266542.6339951599 0.011630370174920222 0.013187143347139118 1.8682314933708136e-09 8.728569311154889 0.048331234552393965 AELAESR ddPTM_A549_PD325901_60min_R1 1 AELAESR 7 0 P06753-2;P06753-3;P06753-6;A0A087WWU8;J3KN67;A0A2R2Y2Q3;A0A494C0P6 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 71.501 0.056688999999999996 6484700.0 3116.0 3188.0 2974.0 3491.3 3661.7 3341.0 3772.9 3493.1 3234.5 4112.9 4110.5 False True 3432.334026122039 3456.6639482869737 3175.8335241148116 3706.9496716824046 3404.514824179226 3313.7920037050185 3916.479774110099 3423.4273802160633 3098.565213276738 3853.2107920880967 3604.934558606371 0.9521210358528513 0.9588700965554512 0.8809684260516937 1.0282987420208458 0.9444040575026068 0.9192377697380711 1.0864218782446269 0.9496503541355612 0.8595343862426758 1.068871217894648 1.0 11.81575735471598 -8.522939661681384 24.999999997328732 0.9321386679241821 0.9671006190721249 0.0 0.07203028139499841 5.713479993808484 2343642.8755322103 0.011636572787269628 0.013257993047234875 2.9995792339192005e-09 8.522939661681384 0.03496195114794276 AELEEMEEVHPS(ph)DEEEEDATK ddPTM_A549_MK2206_60min_R1 4 AELEEMEEVHPSDEEEEDATK 21 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 AELEEMEEVHPS(1)DEEEEDATK;AELEEMEEVHPS(1)DEEEEDATK;AELEEMEEVHPS(1)DEEEEDATK;AELEEMEEVHPS(0.992)DEEEEDAT(0.008)K 95.835 3.1573e-07 10332400.0 1809.22 2259.12 1848.16 1909.4799999999998 3057.4400000000005 2356.77 2863.11 2672.12 3208.08 2791.5299999999997 2803.74 True False 2114.5721048178116 2374.0995585183073 2110.256878573643 2377.302685719814 2607.694626166277 2606.161837102686 3383.3000263038734 3050.901193024292 2481.4550022510584 2160.921434198216 2107.4939787125513 1.0033585510453435 1.1265036021448673 1.0013109882585665 1.1280234770455126 1.2373438085736757 1.2366165044489315 1.6053664022189522 1.4476440852694912 1.177443460012615 1.0253511782360123 1.0 11.041312793934331 -6.489710722672285 6.806729588091891 1.1746594614252988 1.0534592041385895 0.13771489841953755 0.17351493661970377 0.5070870447799393 76.78222308367653 0.029428699194485836 0.06734136112509537 3.238092698253546e-07 6.489710722672285 -0.12120025728670925 AELEEMEEVHPS(ph)DEEEEDATK ddPTM_A549_PD325901_60min_R1 4 AELEEMEEVHPSDEEEEDATK 21 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 AELEEMEEVHPS(1)DEEEEDATK;AELEEMEEVHPS(1)DEEEEDATK;AELEEMEEVHPS(0.963)DEEEEDAT(0.037)K;AELEEMEEVHPS(0.979)DEEEEDAT(0.021)K 98.01899999999999 1.4772e-07 12590200.0 2649.7200000000003 2727.3900000000003 2795.12 2945.29 2689.58 2492.02 2693.8100000000004 3456.5099999999998 3357.9500000000007 3562.3800000000006 3000.8 True False 2918.717623779232 2957.236727076038 2984.8136516219856 3127.2138740610853 2500.6731793472864 2471.7258153465978 2796.3244136593953 3387.5671964703597 3216.827039085679 3337.4507188404255 2631.7206236384873 1.1090529889696106 1.1236894602389473 1.1341681274265842 1.1882772988789188 0.9502046520006288 0.9392052458552046 1.0625460729161043 1.2872062353590086 1.2223284683760438 1.2681629990900138 1.0 11.361790629250383 AELELELGR ddPTM_A549_PD325901_60min_R1 1 AELELELGR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 93.551 0.0026961 972660.0 793.98 641.48 801.07 663.77 793.07 683.18 739.51 970.02 875.39 953.02 825.4 False True 874.5842651028165 695.5397708742562 855.4354274252356 704.7695653689543 737.3674991429716 677.6164085876069 767.6524577253994 950.6721901340306 838.6004025507261 892.8461545565892 723.8810326416981 1.2081878453302597 0.9608481774083587 1.1817348277567779 0.9735986074907927 1.018630777563071 0.9360880835829402 1.0604677054791225 1.3132989362419005 1.1584782094515953 1.2334155949607875 1.0 9.499608804595947 -8.011423166959876 24.91995036771007 1.0991969296821873 1.0403597109531835 0.10731032017593634 0.11579200568031509 1381.0123504035328 3012719.039275259 0.018558172007737527 0.02470276642042974 9.74040092012167e-09 8.011423166959876 -0.058837218729003826 AELGAGAPPAVVART(ph)PPEPR ddPTM_A549_PD325901_60min_R1 1 AELGAGAPPAVVARTPPEPR 20 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 AELGAGAPPAVVART(1)PPEPR 57.238 0.0022857 22110000.0 1987.3 1914.1 1858.8 1991.6 2164.9 1522.7 2019.8 2217.0 2374.0 2314.1 2202.9 True False 2189.0492330270627 2075.4079245345347 1984.949345872432 2114.616608748224 2012.8448924995507 1510.2996360495767 2096.6645942769683 2172.780195797145 2274.2290358073815 2167.987331073223 1931.9572653336525 1.1330733201539063 1.0742514660002627 1.0274292198329904 1.0945462649159714 1.041868227945471 0.7817458818317833 1.0852541264233764 1.1246523071626546 1.1771632202302456 1.12217147344551 1.0 10.91584746694494 -13.309398688895689 15.506488054582734 0.5740323672426084 1.0662815867791704 0.0 0.10089075803331457 0.0 0.0 0.0 0.01424039250933698 4.9045742209912914e-14 13.309398688895689 0.492249219536562 AELGMGDS(ph)TSQSPPIKR ddPTM_A549_PD325901_60min_R1 1 AELGMGDSTSQSPPIKR 17 1 Q9NR19;Q9NR19-2 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic 1 AELGMGDS(0.3)T(0.278)S(0.24)QS(0.182)PPIKR 45.369 0.016534 24462000.0 2482.8 2655.3 2626.9 2364.7 2816.6 2673.5 2604.6 2432.7 2426.9 2518.7 3697.7 True False 2734.8520282592417 2879.07144977616 2805.177230832952 2510.762148376646 2618.771732742499 2651.727902396099 2703.7194782918095 2384.177890083768 2324.905832772088 2359.668852155968 3242.906341651572 0.8433336458512753 0.8878059205095281 0.8650195026614028 0.7742320880898294 0.8075385030727686 0.8177010443803342 0.8337334456951473 0.7351978869884771 0.7169204373592987 0.7276401485447211 1.0 11.663071642595183 -10.960035361636486 1.2425451195281934 0.9993106707910795 0.8019016979844878 0.0 0.09329873841197706 0.24639310230924868 0.6802150684056313 0.04080167822894341 0.009614230628358844 1.0963889210394854e-11 10.960035361636486 -0.19740897280659164 AELGMGDSTSQS(ph)PPIKR ddPTM_A549_MK2206_60min_R1 2 AELGMGDSTSQSPPIKR 17 1 Q9NR19;Q9NR19-2 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic 1 AELGMGDSTS(0.003)QS(0.997)PPIKR;AELGMGDSTSQS(0.999)PPIKR 156.92 1.618e-22 35594000.0 9975.099999999999 10247.7 9167.5 8611.0 12966.8 10350.8 9281.3 10833.6 14798.7 14370.099999999999 13919.6 True False 11658.653012219705 10769.264158534324 10467.58935066438 10720.695386562478 11059.400897016096 11446.114785695041 10967.592070906858 12369.295976508538 11446.818078667848 11123.884429532103 10462.97915858362 1.1142766162021052 1.0292732113204521 1.000440619446038 1.0246312473792356 1.0570030513673712 1.0939632596233242 1.048228416082552 1.182196369602917 1.0940304769007503 1.0631660697141205 1.0 13.353006072947133 -5.245793574663379 22.999051476437664 1.0532221896889546 1.1142767506207796 0.08070557103218468 0.04964152956059225 1943.0139837419226 2856047.3744434896 0.007706639425193367 0.23624601931750286 5.678144302353317e-06 5.245793574663379 0.06105456093182493 AELGMGDSTSQS(ph)PPIKR ddPTM_A549_PD325901_60min_R1 2 AELGMGDSTSQSPPIKR 17 1 Q9NR19;Q9NR19-2 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic 1 AELGMGDS(0.002)T(0.016)S(0.018)QS(0.964)PPIKR;AELGMGDS(0.005)T(0.023)S(0.02)QS(0.952)PPIKR 89.917 2.6395999999999997e-06 59701000.0 11224.8 9776.2 10878.6 10440.0 13951.3 12070.0 11620.0 12782.0 11584.4 13487.900000000001 12885.7 True False 12364.333432738975 10600.07468357689 11616.887214336033 11084.8550890397 12971.408817372161 11971.705921795747 12062.20545870798 12527.052982714977 11097.54795383616 12636.271692140588 11300.84058918237 1.0941074104323376 0.9379899309192732 1.027966647494895 0.9808876606622149 1.1478268996900043 1.0593641974965613 1.0673724103545377 1.1085062994965516 0.9820108394820816 1.1181709530737518 1.0 13.464142468007712 -8.804431822723956 24.997782291960167 0.9915050912347431 1.049782497941566 0.0 0.06698281270840707 167.88635326682336 97616.0892661725 0.009512204364146981 0.010126548864368637 1.5688021551559124e-09 8.804431822723956 0.05827740670682291 AELGRAPS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 AELGRAPSPAK 11 1 E5RH49;P52952-3;P52952-2;P52952 E5RH49 NKX2-5 Homeobox protein Nkx-2.5 1 AELGRAPS(1)PAK 55.841 0.004538899999999999 7329600.0 3519.3 3430.4 3847.2 4199.9 4238.4 4573.6 4655.2 4619.0 3625.6 4630.0 5245.6 True False 3876.5767452282703 3719.4918469898475 4108.294127092971 4459.31828433504 3940.70940568622 4536.354117972246 4832.356183423185 4526.8704214645995 3473.228640363625 4337.661009839258 4600.424454598124 0.8426563208430979 0.8085105806426657 0.8930250170691819 0.9693275758235638 0.8565969172143413 0.9860729510378462 1.0504152890921283 0.9840114681026862 0.754980040350871 0.9428827823710412 1.0 12.16755126111294 -5.859127367136908 5.264531080038085 0.9114123634180982 0.8261624377461538 0.17182180603139807 0.08005786654046829 0.37927618127777707 16.38005342311779 0.014643353260651632 0.0479362538664003 1.3831606748751212e-06 5.859127367136908 -0.08524992567194434 AELKLS(ph)R ddPTM_A549_PD325901_60min_R1 2 AELKLSR 7 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 AELKLS(1)R;AELKLS(1)R 54.538999999999994 0.011772 20681300.0 7591.0 7913.700000000001 7669.299999999999 6963.299999999999 8199.4 7269.5 8680.4 8011.599999999999 7052.2 8331.3 7692.6 True False 8361.632731801157 8580.615272132562 8189.784817247381 7393.407226198291 7623.502430394391 7210.299602195047 9010.737372097139 7851.802353021389 6755.820558686106 7805.260296171444 6746.458967409163 1.239410596313501 1.2718694819880847 1.2139382832995274 1.095894492490714 1.1300005628466807 1.0687531988301726 1.3356247204090719 1.1638405259636093 1.0013876303587061 1.1569417873698107 1.0 12.719914754141948 -8.732342766985148 5.113300389975928 1.0002578658114423 1.1902997022071715 0.28663492176156014 0.08676199352199011 0.09766775113341197 6.430977263108577 0.01277131776475292 0.014220147233382446 1.8520693004475297e-09 8.732342766985148 0.19004183639572925 AELLQSDENGIPSS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 AELLQSDENGIPSSPQK 17 0 Q14542-3;Q14542 Q14542-3 SLC29A2 Equilibrative nucleoside transporter 2 1 AELLQSDENGIPS(0.191)S(0.809)PQK 111.43 4.5001e-09 3993600.0 1257.4 1031.5 1344.6 1056.5 1616.4 1662.1 1267.0 1381.5 1336.2 1277.3 1678.4 True False 1385.0503223510434 1118.4281250495646 1435.8526417366413 1121.7576055144104 1502.8696402772755 1648.5644086674995 1315.2163783290027 1353.9448987342166 1280.0441607606674 1196.651060014618 1471.96744025421 0.9409517387910727 0.7598185221110673 0.9754649474370631 0.762080447459274 1.0209938067772264 1.1199734203242913 0.893509151331407 0.919819869453355 0.869614453251495 0.8129602783930842 1.0 10.52353004416618 -6.772848672555756 24.997919576300788 0.9509471350139679 0.8607307286621444 0.15889293244555924 0.09784986210426524 290.0985005173876 635610.3285927491 0.01334774762941954 0.025380660769864116 1.6871407976032224e-07 6.772848672555756 -0.09021640635182349 AELNEFLTR ddPTM_A549_MK2206_60min_R1 2 AELNEFLTR 9 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82;E9PQX2;H0YES8 P23396 RPS3 40S ribosomal protein S3 0 ; 121.6 0.00034428 11729600.0 4244.9 4749.5 3937.4 3254.8999999999996 4994.5 3795.7999999999997 3920.2 3940.3 5537.9 5791.700000000001 5575.1 False True 4961.335342159122 4991.229263245289 4495.782526240079 4052.350646118013 4259.815666174146 4197.469036551882 4632.44959610928 4498.84959166266 4283.574492209091 4483.350947489658 4190.64880506764 1.183906257226688 1.191039740006256 1.0728130023216094 0.9669983896568983 1.0165050483406923 1.001627488200871 1.105425391530634 1.0735448855132697 1.022174534651789 1.0698464977709565 1.0 12.032957906961641 -5.8734802720240085 3.605700950543339 1.0193871797815024 1.1890679027930806 0.6908236636226999 0.03889957075700995 0.08166219823141241 2.0135793261572514 0.005310928438145217 0.01913919472444947 1.3381960017863443e-06 5.8734802720240085 0.16968072301157822 AELNEFLTR ddPTM_A549_PD325901_60min_R1 4 AELNEFLTR 9 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82;E9PQX2;H0YES8 P23396 RPS3 40S ribosomal protein S3 0 ;;; 145.25 8.9534e-05 17408300.0 8518.2 9013.7 8937.3 8109.1 10762.800000000001 8013.700000000001 8092.6 9249.8 9632.9 10095.599999999999 10835.9 False True 9382.961393232596 9773.316132582897 9543.838922350804 8609.98068989769 10006.858057644307 7948.439084133771 8400.56832144064 9065.305482672271 9228.062712312108 9458.16209307412 9503.152994429573 0.9873524501533933 1.0284287897197577 1.0042813083136808 0.9060130563976576 1.053003993886028 0.8364002019953669 0.883976962842203 0.9539260799006443 0.9710527356258799 0.9952656869376063 1.0 13.214190540709131 AELPGSS(ph)SPLLAQPR ddPTM_A549_PD325901_60min_R1 2 AELPGSSSPLLAQPR 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 AELPGS(0.064)S(0.608)S(0.329)PLLAQPR;AELPGS(0.04)S(0.86)S(0.1)PLLAQPR 214.11 1.4755999999999997e-45 26598000.0 7392.8 8829.4 7634.5 7922.4 9310.2 8245.8 8709.3 8967.8 8558.599999999999 8892.2 9074.2 True False 8143.311613708281 9573.484524782 8152.623079977984 8411.748654924153 8656.283670446357 8178.648938686279 9040.737177411822 8788.930193896997 8198.911805333219 8330.744974447656 7958.130926093162 1.0232693693198671 1.2029815309261132 1.0244394262536094 1.0570005360610073 1.087728230515043 1.027709774398167 1.1360377532579924 1.1043962804230583 1.0302559585254603 1.0468218042420947 1.0 12.95821391891258 -8.91714356697691 4.007461370848019 1.012694311759474 1.0841028147320908 0.18630940544358465 0.05210193517896715 0.1991136608180545 5.827368758161664 0.008651319158377392 0.0090438192585535 1.2101980059932776e-09 8.91714356697691 0.0714085029726168 AENGERS(ph)DLEEDNER ddPTM_A549_MK2206_60min_R1 3 AENGERSDLEEDNER 15 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER 66.536 0.00092703 350835000.0 846.37 1032.68 1087.24 969.38 1258.6 1118.08 1058.74 1033.56 1551.6100000000001 1161.77 1765.81 True False 989.216564240198 1085.2390010670897 1241.4269807053552 1206.8781435171215 1073.4616072573388 1236.3944834785625 1251.0993534474624 1180.0702951447502 1200.1728124120234 899.3253501156927 1327.310643123261 0.7452788609548836 0.8176224659160733 0.9352949794662875 0.9092657772089037 0.8087493404945534 0.9315034802774083 0.9425821754156453 0.8890686601954436 0.9042139597313311 0.6775545384006815 1.0 10.37429034251817 -2.0000000000001172 0.07669928601421717 1.092763009330037 0.35528839135433404 0.0 0.10409176666715353 98.37801525974875 0.5367777595632225 0.8033661379742485 7.728353980884132 0.009999999999997301 2.0000000000001172 -0.7374746179757028 AENGERS(ph)DLEEDNER ddPTM_A549_PD325901_60min_R1 4 AENGERSDLEEDNER 15 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER 282.85 1.9562999999999993e-106 444461000.0 5362.1900000000005 5422.280000000001 5529.280000000001 5958.33 6589.200000000001 5292.91 5893.38 5095.67 6384.450000000001 5493.98 6120.5599999999995 True False 5906.555581364359 5879.234565093318 5904.5301910617145 6326.362511750761 6126.397323505954 5249.806295818718 6117.655800881278 4994.032864374216 6116.133769022931 5147.089165191509 5367.769921426543 1.1003742089963922 1.0952843827424794 1.0999968846452572 1.1785830250469196 1.1413300892519993 0.97802371798073 1.1397015688883037 0.9303738680079264 1.139418018758431 0.9588878138472101 1.0 12.390107119327855 -7.207962929892107 24.999789034350894 1.0567477567086292 1.1233650244249056 0.27349799452027757 0.07000998235426273 447.3269458890157 209121.6114530839 0.01021969377014252 0.01770102301091689 6.194939510134741e-08 7.207962929892107 0.06661726771627641 AENGPGPGVLVLRAS(ph)FDER ddPTM_A549_MK2206_60min_R1 2 AENGPGPGVLVLRASFDER 19 1 C9J5X1;P08069 C9J5X1 IGF1R Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain 1 AENGPGPGVLVLRAS(1)FDER;AENGPGPGVLVLRAS(1)FDER 58.418 0.0014009 5931200.0 1422.69 1599.48 1577.3600000000001 1201.94 1504.5300000000002 1340.5900000000001 1161.48 1231.94 1679.27 1970.7199999999998 2163.36 True False 1662.8052905690029 1680.8867000685498 1801.0533665845605 1496.4153539571366 1283.2156300388403 1482.4503439883788 1372.5058815593616 1406.5712676580206 1298.9180262431535 1525.5329832755178 1626.138006301435 1.0225486915166355 1.0336679258186934 1.1075648927737451 0.9202265417562279 0.7891185281115509 0.9116387036301634 0.8440279215175922 0.8649765654621114 0.7987747787762945 0.9381325430953193 1.0 10.667233985222536 -6.381706100977249 5.512408230736583 0.8879318981181931 1.051490775651113 0.6154890210161998 0.06056227060022309 0.1585273468599712 6.523597247547997 0.011412167893165284 0.02692051436565752 4.152349484874703e-07 6.381706100977249 0.16355887753291987 AENGPGPGVLVLRAS(ph)FDER ddPTM_A549_PD325901_60min_R1 3 AENGPGPGVLVLRASFDER 19 1 C9J5X1;P08069 C9J5X1 IGF1R Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain 1 AENGPGPGVLVLRAS(1)FDER;AENGPGPGVLVLRAS(1)FDER;AENGPGPGVLVLRAS(1)FDER 112.61 5.7006000000000003e-11 9577220.0 2468.37 2640.03 3514.79 3125.54 3258.6099999999997 3211.94 3382.34 3233.16 3200.99 3317.35 3852.96 True False 2718.9571052820465 2862.5145932860923 3753.3247855492564 3318.597507183634 3029.736475194217 3185.783025555313 3511.056799587466 3168.6720874350463 3066.463522042573 3107.8919548575077 3379.0703459257993 0.8046464935423253 0.8471308082524749 1.1107566286906994 0.9821037052942452 0.8966183491406801 0.9427986692838355 1.0390599899232063 0.9377348687799786 0.9074873287973595 0.9197476337255731 1.0 11.72241066968937 -5.545587878140411 24.985434626040647 0.9648095566426258 0.815267454899818 0.4673890812202489 0.06003628278082808 127.15913104606842 139905.0834930011 0.008348558494599034 0.032337812944053836 2.8471616275642784e-06 5.545587878140411 -0.1495421017428078 AENGT(ph)SPR ddPTM_A549_MK2206_60min_R1 1 AENGTSPR 8 0 Q15035 Q15035 TRAM2 Translocating chain-associated membrane protein 2 1 AENGT(0.5)S(0.5)PR 60.518 0.011939 5784400.0 2740.1 2531.2 1683.7 1217.3 712.87 665.9 615.48 970.95 1237.3 3046.0 3328.4 True False 3202.561890986879 2660.027268370666 1922.4739776071565 1515.5385546466734 608.0077673331784 736.365096011354 727.3047490978371 1108.5851359096664 957.0535255620913 2357.9064844611244 2501.8664208331916 1.28006909734227 1.0632171430978328 0.7684159160531515 0.6057631782523212 0.2430216746466803 0.29432630370654395 0.2907048685899163 0.4431032475109029 0.38253582109446344 0.9424589837517686 1.0 11.288789048128208 -5.734854747671528 1.9437529700653216 0.5863439334153182 1.2734496857282216 0.5062960962117604 0.24385181532952632 0.327364511336639 2.2117168336710993 0.044102566250620395 0.28772340059941914 1.8413877613929977e-06 5.734854747671528 0.6871057523129034 AENGTGSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AENGTGSSPR 10 0 M0R102;M0R050;Q9NQT4 M0R102 EXOSC5 Exosome complex component RRP46 1 AENGT(0.002)GS(0.035)S(0.963)PR 96.06700000000001 0.0005440999999999999 492460000.0 6066.6 4848.9 3358.7 2634.2 2409.7 1787.5 1704.0 1751.9 1874.2 7443.8 7415.4 True False 7090.4937658702265 5095.688298673564 3835.014164393396 3279.5791182537305 2055.2363221102873 1976.6520635535303 2013.5947430667338 2000.2371899687353 1449.6966924823996 5762.240410056373 5573.951525371487 1.2720766826901435 0.914196737355722 0.6880243121844882 0.588375966910684 0.36872159952508954 0.3546231169317161 0.36125085299024623 0.3588544286515706 0.2600841944684443 1.0337801439118788 1.0 12.444484740564473 -5.4514222749342816 1.4956970839281865 0.5581270249063678 1.4045867060562502 0.4508869287427236 0.24659273778466312 0.6971814807348663 1.8444647844381894 0.04343435998706085 0.7794987314062 3.5365330826658148e-06 5.4514222749342816 0.8464596811498825 AENGTS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AENGTSPR 8 0 Q15035 Q15035 TRAM2 Translocating chain-associated membrane protein 2 1 AENGT(0.123)S(0.877)PR 71.34899999999999 0.0061679 5316500.0 1298.1 1106.6 726.76 669.49 442.8 276.0 290.87 340.16 276.69 1652.8 1685.0 True False 1517.187544502051 1162.9212133292417 829.8254962082189 833.5150800545485 377.66470657361316 305.2061368060274 343.7173139177352 388.37872169631 214.02015678313677 1279.4313320805463 1266.5679963658 1.197872951831533 0.9181672177617349 0.6551764284185777 0.6580894846910529 0.29817957476997475 0.24097098433069855 0.2713769137574716 0.3066386667045877 0.16897644453138796 1.0101560561704193 1.0 10.306708815629966 -2.1460823559267164 12.868453483924402 0.5739494818702536 1.0912893706473692 0.0 0.35766554155682423 0.0 0.0 0.05275567161661138 0.0 0.007143608478904821 2.1460823559267164 0.5173398887771156 AENGTS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AENGTSPR 8 0 Q15035 Q15035 TRAM2 Translocating chain-associated membrane protein 2 1 AENGT(0.014)S(0.986)PR;AENGT(0.011)S(0.989)PR 91.867 0.0025995000000000002 26539000.0 2586.1 2973.3 2656.0 2011.6299999999999 2461.6000000000004 2507.8 1516.12 2237.27 2130.6 2749.1 3365.8 True False 2848.638968213803 3223.870425797259 2836.2521318254676 2135.883816356795 2288.7057080589852 2487.3773082584403 1573.8167762526973 2192.6458947456376 2041.0582913610817 2575.5213568356576 2951.8279375641214 0.9650423495092092 1.0921606861874307 0.9608460221316192 0.7235800532870313 0.7753520044083764 0.8426566049480003 0.5331668408665537 0.7428095204475338 0.6914557130472123 0.8725174404850319 1.0 11.527392913628956 -6.076320038023336 5.1342639162045645 0.8073546893260704 1.0288991693129526 0.42459858056873845 0.11745457662603863 0.2101938976410631 9.914090110652003 0.02092911335146836 0.058114040012084756 8.388416039222864e-07 6.076320038023336 0.2215444799868822 AENNS(ph)EVGASGYGVPGPTWDR ddPTM_A549_PD325901_60min_R1 2 AENNSEVGASGYGVPGPTWDR 21 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 AENNS(1)EVGASGYGVPGPTWDR;AENNS(1)EVGASGYGVPGPTWDR 134.29 1.1314e-17 16170900.0 3920.7 3467.8 4526.5 4125.2 4212.799999999999 4112.6 3459.9 4231.0 4372.3 4014.7999999999997 4818.299999999999 True False 4318.72657773321 3760.0436762451604 4833.695510055711 4380.004234991052 3916.9074613710145 4079.108349128183 3591.568387829926 4146.60938584471 4188.547436082821 3761.3048428299458 4225.679645720249 1.022019400383841 0.8898080288820089 1.1438859344085057 1.0365206551866992 0.9269295805085561 0.965314148520342 0.8499386344791782 0.9812881556329949 0.9912127248749121 0.8901064818388161 1.0 12.044967683489775 -4.910435191228027 20.008991098829025 0.9854331657185047 3.288980490260363 0.0 0.07885403336056956 1967.4259536595546 416860.34405125957 0.00949138499966164 10597.729942138287 1.2290365792115098e-05 4.910435191228027 2.3035473245418583 AENPSPRS(ph)PSSQTPNSR ddPTM_A549_PD325901_60min_R1 1 AENPSPRSPSSQTPNSR 17 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 AENPS(0.042)PRS(0.955)PS(0.002)S(0.001)QT(0.001)PNSR 55.126999999999995 0.0032225 3691500.0 669.78 475.28 565.55 635.37 730.63 577.26 564.06 627.66 677.93 648.46 631.36 True False 737.7755725340243 515.3335135953052 603.931623928423 674.6153618700341 679.3130693366651 572.558985949943 585.5256119654753 615.1408289102557 649.4389596650791 607.5161249331237 553.7067225207925 1.3324302243889043 0.9306975924894134 1.090706685262873 1.2183622384044674 1.2268463461018497 1.034047380431511 1.0574652395402115 1.1109506240230924 1.17289339870836 1.0971803307125472 1.0 9.112978227425108 -7.281201101869667 24.731347652325972 1.080997643274084 1.1464942235181588 0.1289885028568274 0.1021570646096273 1523.524695888163 1906652.0063770376 0.016313849566599977 0.026102611202870246 5.233580373479258e-08 7.281201101869667 0.06549658024407479 AENQNESS(ph)QGK ddPTM_A549_PD325901_60min_R1 2 AENQNESSQGK 11 0 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 AENQNES(0.292)S(0.708)QGK;AENQNES(0.1)S(0.9)QGK 84.289 0.00053172 5939200.0 1711.53 1679.7600000000002 1796.21 1774.33 1738.1399999999999 1531.52 876.74 1129.68 1484.7 1949.51 2568.3 True False 1885.2832656382066 1821.319270318233 1918.111612088186 1883.9263343041964 1616.0590426574759 1519.0478088938378 910.1048204705365 1107.147646183184 1422.3032221833287 1826.417605894542 2252.4153817950973 0.8370051460648883 0.8086071889931352 0.8515798762480112 0.8364027121865826 0.7174782483369175 0.6744083800756187 0.4040572746156681 0.4915379530487958 0.631456894531506 0.8108706860450181 1.0 11.13725719289506 -3.118460873693685 15.136823487925739 0.7649047954740179 0.7267927024169135 0.0 0.16795645659990757 0.0 0.0 0.027339188846405845 0.0 0.0007612707200513928 3.118460873693685 -0.03811209305710439 AEPAKIEAFR ddPTM_A549_PD325901_60min_R1 1 AEPAKIEAFR 10 1 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 50.284 0.027775 2872600.0 1200.7 1500.8 1718.1 1851.0 1559.3 2167.0 2296.4 2289.9 2277.8 1813.2 2128.8 False True 1322.5941800913774 1627.2776830580578 1834.700597774599 1965.3320660739923 1449.7801472929696 2149.3526704665605 2383.7907586382985 2244.226148108201 2182.071987262871 1698.7142425573518 1866.9710955750504 0.7084170629240524 0.8716137528400438 0.9827150522699915 1.0526847848539644 0.77654129232591 1.151251176604067 1.2768225305084657 1.2020679663586067 1.1687765238758374 0.9098770980351608 1.0 10.866483876611133 -7.274625788429667 24.638648369174103 1.112651940579177 0.8934960774540492 0.47023014366648663 0.126170074927133 483.7404835249814 903862.2266250959 0.0189856790838748 0.030465151865906533 5.313420800606786e-08 7.274625788429667 -0.2191558631251278 AEPASPDS(ph)PKGSSETETEPPVALAPGPAPTR ddPTM_A549_MK2206_60min_R1 1 AEPASPDSPKGSSETETEPPVALAPGPAPTR 31 1 F5GWT5;A0A6E1WCP9;P11474-2;P11474 F5GWT5 ESRRA Steroid hormone receptor ERR1 1 AEPAS(0.015)PDS(0.969)PKGS(0.005)S(0.005)ET(0.005)ET(0.002)EPPVALAPGPAPTR 54.388999999999996 0.001518 4779700.0 940.31 929.18 843.0 883.76 1413.4 828.49 883.24 978.1 1324.1 1310.9 1568.5 True False 1099.0113396277038 976.4712931513335 962.5500760959993 1100.2812396734937 1205.4907323196592 916.1602618928475 1043.7132751562572 1116.7486703056231 1024.1934641532087 1014.7667795404099 1178.9981616022294 0.9321569578481569 0.8282212177704612 0.8164135513052179 0.933234058803144 1.022470408843918 0.7770667433847466 0.8852543703188448 0.9472013669537782 0.8686981010736734 0.8607025969924896 1.0 10.203345753404347 -10.87994103876498 0.7438725767306231 1.0136966731451211 0.887185519894433 0.0 0.07729245698646152 0.963163671798438 0.769612246205752 0.07817229401206754 0.012354649232973232 1.3184357215392173e-11 10.87994103876498 -0.12651115325068818 AEPDESNAR ddPTM_A549_MK2206_60min_R1 2 AEPDESNAR 9 0 F8VSD4;F8VV71;P61088;Q5JXB2;F8VZ29 F8VSD4 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like 0 ; 69.954 0.010458 3802400.0 1034.84 1096.45 960.1400000000001 914.12 888.44 642.6800000000001 792.3 670.68 898.31 1440.94 1705.0 False True 1209.4956925910963 1152.2546216833978 1096.3022895169784 1138.0794410364065 757.7516529093515 710.6879710235424 936.250654302684 765.7509438713579 694.8442193062984 1115.430653223707 1281.601444393881 0.9437377726763672 0.8990740660629825 0.8554159284951979 0.8880135443157592 0.5912537444647791 0.5545311876264734 0.7305318345247912 0.597495381439361 0.542168723627584 0.8703412890980607 1.0 10.32373196347228 -6.643999585236112 11.428642180113787 0.7320012370636175 0.8947269288876571 0.31530024886920516 0.13496378103108964 0.6025959614196292 57.42909415120467 0.02706087158152585 0.0563442186784491 2.2698670196719473e-07 6.643999585236112 0.16272569182403962 AEPDESNAR ddPTM_A549_PD325901_60min_R1 1 AEPDESNAR 9 0 F8VSD4;F8VV71;P61088;Q5JXB2;F8VZ29 F8VSD4 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like 0 99.802 0.0022041 3728600.0 547.98 603.11 663.91 605.84 745.07 650.21 655.08 717.4 547.42 726.04 695.57 False True 603.6105261984452 653.9361963147293 708.9669250151524 643.2613608375303 692.738853551961 644.9149053364387 680.009427873531 703.0908942105877 524.4138411043289 680.1977104932384 610.0192995815192 0.9894941465172159 1.0719926349270221 1.1622040901025794 1.054493458287001 1.1356015359304015 1.0572041012126308 1.1147342851939699 1.1525715574784547 0.8596676227524002 1.1150429354609968 1.0 9.252711076663518 -8.758128904020579 24.99990225616575 0.9337319316895497 1.0937039208465038 0.15216829817544864 0.07822276887502351 46.19709760733779 348868.38422022114 0.01124235804875673 0.012492391601861379 1.7453040480180744e-09 8.758128904020579 0.1599719891569541 AEPEAGEEQAGDDRDS(ph)GGPVLQFDYEAVANR ddPTM_A549_MK2206_60min_R1 2 AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR 31 1 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A 1 AEPEAGEEQAGDDRDS(0.995)GGPVLQFDY(0.005)EAVANR;AEPEAGEEQAGDDRDS(1)GGPVLQFDYEAVANR 91.1 1.1592e-09 5862200.0 1162.9 1557.5700000000002 1092.12 1212.66 1958.33 1529.63 1262.8899999999999 1109.96 2283.17 2190.17 2101.7 True False 1359.169089824694 1636.8436600806338 1246.999038085365 1509.761754438377 1670.262251184064 1691.4944313137826 1492.3407658870585 1267.3002291099365 1766.0356404732897 1695.4090758608747 1579.7898860308617 0.8603480132662036 1.0361147862473767 0.7893448673851078 0.9556725028994668 1.0572686063844283 1.0707084823562028 0.9446450943147164 0.8021954313772455 1.117892737565475 1.0731864350141525 1.0 10.625516975634872 -6.680836144803414 0.43224327364054155 1.0433890830467778 0.8775733634797224 0.13067487573550518 0.10100388850583207 2.571871327025055 0.6728123612789586 0.029023679670800547 0.18086183529284547 2.0852774901541165e-07 6.680836144803414 -0.16581571956705543 AEPEAGEEQAGDDRDS(ph)GGPVLQFDYEAVANR ddPTM_A549_PD325901_60min_R1 2 AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR 31 1 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A 1 AEPEAGEEQAGDDRDS(1)GGPVLQFDYEAVANR;AEPEAGEEQAGDDRDS(1)GGPVLQFDYEAVANR 131.99 2.4381e-28 12346900.0 2827.6000000000004 2973.9 2934.6 2944.6000000000004 3439.3 3060.0 2781.1 3564.3999999999996 3561.1000000000004 3599.6 3708.6 True False 3114.6558704308995 3224.520989902959 3133.7596031833646 3126.4812543281887 3197.7354329408795 3035.080374539768 2886.936282376313 3493.305245782293 3411.439351058834 3372.3206416884186 3252.4657107523626 0.9576291181592242 0.9914081428262193 0.9635027335794606 0.9612649393942323 0.9831726810737621 0.9331629122195084 0.8876146711808085 1.0740482933405682 1.0488778835641275 1.0368504825553815 1.0 11.667318132016138 -8.272684618121824 24.997131236874544 1.0275486685550201 0.9563760371429805 0.6281539180618034 0.031263038201442196 467.00294214207776 1038103.0284856898 0.0056887023879819915 0.006909286517701834 5.3372234054443714e-09 8.272684618121824 -0.07117263141203967 AEPEDHYFLLTEPPLNT(ph)PENR ddPTM_A549_PD325901_60min_R1 1 AEPEDHYFLLTEPPLNTPENR 21 0 F8WDR7;B4DXW1;P61158 F8WDR7 ACTR3 Actin-related protein 3 1 AEPEDHYFLLT(0.057)EPPLNT(0.943)PENR 49.765 0.01154 1155300.0 646.36 632.63 324.24 284.69 478.77 473.47 460.0 464.2 628.61 806.27 552.17 True False 711.9779913749167 685.9439503151784 346.2448762135125 302.27465472209906 445.1428468668345 469.61421729847814 477.50555172165866 454.9411668421448 602.1917077501593 755.3619746011007 484.25659049402253 1.470249461444769 1.4164886214876315 0.7150029199608516 0.6242034918176921 0.9192293003440892 0.9697631927309307 0.9860589635641784 0.9394630362759315 1.2435384867675692 1.559838295294041 1.0 8.919627873106801 -8.736050851629484 24.725941987155842 1.115004346506769 0.9917374507968314 0.0845401791376501 0.27915131410770033 560.7737449360385 546138.4182113903 0.04519872862956747 0.051240524841301906 1.8363233152881479e-09 8.736050851629484 -0.12326689570993754 AEPEKNGEVVHTPET(ph)SV ddPTM_A549_MK2206_60min_R1 2 AEPEKNGEVVHTPETSV 17 1 O15427 O15427 SLC16A3 Monocarboxylate transporter 4 1 AEPEKNGEVVHTPET(0.898)S(0.102)V;AEPEKNGEVVHTPET(0.903)S(0.097)V 120.11 3.6933e-10 62686000.0 2981.6000000000004 3776.8999999999996 2553.1000000000004 3253.5 4340.1 2573.6 2726.2 2439.3999999999996 4209.3 4843.1 5168.5 True False 3484.821186878758 3969.1280775557684 2915.16797067698 4050.6076460551626 3701.677039295707 2845.9366437825806 3221.5152514956158 2785.192420349183 3255.90027087086 3749.040346320968 3885.0188066567603 0.8969895283152076 1.021649643176731 0.7503613536392679 1.0426224035555955 0.9528080103378374 0.73254127854059 0.8292148408588734 0.7169057754821967 0.8380655108521119 0.9649992787415081 1.0 11.923705867131565 -4.772421276198246 17.30484394030449 0.896463305786181 5.492682207619399 0.0 0.11442171993675856 108656.87352997602 6137584.469477113 0.016017878592855993 5116687.989505887 1.6888019579224833e-05 4.772421276198246 4.596218901833218 AEPEKTEGAAEAK ddPTM_A549_MK2206_60min_R1 1 AEPEKTEGAAEAK 13 1 P80723 P80723 BASP1 Brain acid soluble protein 1 0 50.897 0.027601999999999998 2395700.0 1457.2 1652.1 1497.2 1215.9 1902.3 1472.1 1059.6 1127.2 1734.0 2106.3 1909.0 False True 1703.1397348805094 1736.1848333103565 1709.5254732276742 1513.7955545838245 1622.4741899615717 1627.8766448991062 1252.1156043154415 1286.9840519052227 1341.2517686290037 1630.4853671111196 1434.9426142803043 1.1869044224703853 1.2099332865524663 1.1913545923124507 1.0549519817160555 1.130689251134495 1.1344541786540836 0.8725893229837908 0.8968888644726115 0.9347076010434806 1.136272176242316 1.0 10.486777326964683 -7.691020484974858 7.641746744212098 0.9553346565866512 1.1515102256248366 0.5959675032900617 0.07485015260553493 0.09567304943789985 8.947204429710343 0.009021035348064492 0.013379304888765335 2.036945995960818e-08 7.691020484974858 0.19617556903818545 AEPGDEALSPAS(ph)R ddPTM_A549_MK2206_60min_R1 2 AEPGDEALSPASR 13 0 Q9BYK8-2;Q9BYK8-4;Q9BYK8 Q9BYK8-2 HELZ2 Helicase with zinc finger domain 2 1 AEPGDEALS(0.264)PAS(0.736)R;AEPGDEALS(0.112)PAS(0.888)R 66.498 0.0048795 2037100.0 399.0 598.5 580.53 422.78 611.67 618.76 688.07 514.98 752.43 879.18 690.08 True False 466.34144538657876 628.961093599812 662.8578833641875 526.361118979315 521.6941532743496 684.2367725003539 813.0834124776575 587.9799920601062 582.0058063838073 680.5726273829714 518.7140907608971 0.8990336944626021 1.2125390553343067 1.2778867880605425 1.0147422797155956 1.005745096511801 1.3191019574900176 1.5674982171487817 1.1335338725763233 1.12201657281002 1.312038056233725 1.0 9.018795750520521 -9.609616293814465 1.1374379916444888 1.0255851835212055 1.1838343708150432 0.0 0.1916395322919613 0.6609338609925387 1.763558240353621 0.04884221239311399 0.03467321113251327 2.456878648994225e-10 9.609616293814465 0.15824918729383763 AEPPKAPEQEQAAPGPAAGGEAPK ddPTM_A549_MK2206_60min_R1 1 AEPPKAPEQEQAAPGPAAGGEAPK 24 1 P80723 P80723 BASP1 Brain acid soluble protein 1 0 115.87 3.8414e-19 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AEPPKAPEQEQAAPGPAAGGEAPK ddPTM_A549_PD325901_60min_R1 1 AEPPKAPEQEQAAPGPAAGGEAPK 24 1 P80723 P80723 BASP1 Brain acid soluble protein 1 0 172.49 4.7886e-41 14682000.0 4183.2 3394.0 4112.7 4081.9 4463.1 4772.2 4560.5 5406.6 4738.7 5055.0 5151.8 False True 4607.875384490925 3680.0242912440344 4391.812553674172 4334.029692332485 4149.627252859139 4733.336785417868 4734.052323101354 5298.761121604348 4539.548918273142 4735.826437308301 4518.161259950933 1.0198563352165448 0.8144960039084571 0.9720353703625592 0.9592463488962659 0.9184327460025639 1.0476245784705063 1.0477829476924791 1.1727693671699297 1.004733708491503 1.0481756105712199 1.0 12.141520048261535 -7.257644218542719 24.79901647639272 1.0231310367288544 0.9332210050854814 0.3910995895622451 0.06681309896354612 291.7949927448868 1906694.3367627778 0.009995931131738816 0.016881378731363243 5.525298958532148e-08 7.257644218542719 -0.08991003164337297 AEPSEVDMNS(ph)PK ddPTM_A549_MK2206_60min_R1 7 AEPSEVDMNSPK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK 199.38 1.4269000000000001e-24 559859000.0 28808.920000000006 30975.039999999997 29221.2 28357.929999999997 38318.13999999999 30880.87 30082.699999999993 31033.989999999994 40633.66 40591.759999999995 40882.74 True False 33671.16138552962 32551.537230907128 33365.205555891334 35305.624123035865 32681.592365733133 34148.66316633751 35548.337193223975 35433.15312010837 31430.20088862149 31422.053223798302 30730.42735177683 1.0956945375373295 1.0592608055294421 1.085738417300668 1.1488816513641649 1.0634929345960913 1.1112329410662438 1.1567797865709986 1.1530315772865303 1.0227713571579797 1.0225062236884734 1.0 14.907380209415638 -8.866278989900419 6.49859783012416 1.0100284838597025 1.1081106814623662 0.62953141913002 0.03219183246951203 0.09761065545692381 5.3622353572385135 0.005907393825496531 0.006268782448460465 1.3605703740012207e-09 8.866278989900419 0.09808219760266379 AEPSEVDMNS(ph)PK ddPTM_A549_PD325901_60min_R1 6 AEPSEVDMNSPK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK 220.99 3.9271e-33 828478000.0 56675.6 59005.399999999994 59607.700000000004 58443.5 69236.5 57757.6 60651.1 64392.0 60367.3 64183.3 68461.9 True False 62429.26518962847 63977.99213746927 63653.0369722187 62053.422260181236 64373.56709295812 57287.241255071254 62959.21080005541 63107.65104545323 57830.272313940586 60130.75548440947 60041.520315741 1.0397682280750222 1.065562494104538 1.0601503199367002 1.0335085110080529 1.0721508508518127 0.954127093281686 1.048594547056289 1.0510668403063137 0.9631713522547047 1.0014862243360796 1.0 15.873672887557532 -7.681993601414804 0.6397936016335136 0.9845272306858164 1.0571900644137795 0.2720259241274888 0.03317979053178791 0.5407685535531664 0.44679861078311234 0.007599003391037908 0.015857768123222486 2.0797273280973506e-08 7.681993601414804 0.07266283372796312 AEPSEVDMNS(ph)PKSK ddPTM_A549_MK2206_60min_R1 1 AEPSEVDMNSPKSK 14 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 AEPS(0.007)EVDMNS(0.979)PKS(0.013)K 48.31399999999999 0.021972 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AEPT(ph)QNALPFS(ph)HRK ddPTM_A549_PD325901_60min_R1 1 AEPTQNALPFSHRK 14 1 Q86YM7-3 Q86YM7-3 2 AEPT(1)QNALPFS(1)HRK 40.856 0.042212 4288900.0 2002.0 1515.9 2146.6 2084.0 2111.8 2297.2 1804.1 2307.4 2566.7 2084.9 2419.7 True False 2205.241566205494 1643.6502130515125 2292.2811845544234 2212.723946892598 1963.474453314495 2278.4923648342315 1872.7560127414006 2261.3770968797185 2458.830524939683 1953.2590581887403 2122.0922397420827 1.0391827107729856 0.7745423041796149 1.0801986556592966 1.0427086558506669 0.925254056606481 1.0737009080770012 0.8825045291004946 1.0656356281452517 1.1586822094210794 0.9204402247972678 1.0 11.051271651059116 -8.483095615430159 22.774844039225798 1.076892507271927 0.9749578004536814 0.027522351601723116 0.10348676983845431 227.82382178298135 130423.33533960697 0.01585064624095512 0.01915974992671475 3.287792379942185e-09 8.483095615430159 -0.10193470681824568 AEPYVAS(ph)EYKTVHEELTK ddPTM_A549_MK2206_60min_R1 1 AEPYVASEYKTVHEELTK 18 1 A0A0A0MT38;Q9BZ29-3;Q9BZ29;Q9BZ29-4;Q6ZSL5;A0A088AWN3;A0A0A0MSY4;Q9BZ29-6;Q9BZ29-5 A0A0A0MT38 DOCK9 Dedicator of cytokinesis protein 9 1 AEPYVAS(0.984)EYKT(0.016)VHEELTK 125.11 4.0079e-11 9280700.0 1706.4 1605.2 1385.2 1509.9 2005.0 1141.2 1040.7 1148.1 2838.1 2571.0 2666.0 True False 1994.398602525459 1686.8978236364537 1581.6421890962968 1879.825567781986 1710.0671560074402 1261.9610265327494 1229.7817189610041 1310.8466909087879 2195.2748815144046 1990.209314362952 2003.958622143159 0.9952294326279673 0.8417827618777775 0.7892589056578372 0.9380560791078524 0.8533445437005018 0.6297340736422637 0.6136762033767935 0.6541286214317571 1.0954691665073604 0.993138926309016 1.0 10.968637004649718 -8.772956710593656 24.999513089916874 1.0450826794144954 0.7870494772989348 0.4492734574643452 0.11804521956925493 140.4282404276647 304812.499914977 0.022158518311779476 0.02368724005067036 1.6867211452270613e-09 8.772956710593656 -0.2580332021155606 AEPYVAS(ph)EYKTVHEELTK ddPTM_A549_PD325901_60min_R1 2 AEPYVASEYKTVHEELTK 18 1 A0A0A0MT38;Q9BZ29-3;Q9BZ29;Q9BZ29-4;Q6ZSL5;A0A088AWN3;A0A0A0MSY4;Q9BZ29-6;Q9BZ29-5 A0A0A0MT38 DOCK9 Dedicator of cytokinesis protein 9 1 AEPYVAS(1)EYKTVHEELTK;AEPYVAS(1)EYKTVHEELTK 208.39 1.0799e-55 44801000.0 6390.7 6207.1 6602.2 6780.4 8112.1 7897.2 7778.5 8933.2 8917.2 8713.8 7846.6 True False 7039.479159415316 6730.194100819345 7050.2649942538 7199.209908594331 7542.334081225744 7832.88782150832 8074.515074058523 8755.020318040177 8542.441094398317 8163.6091808935935 6881.517943695594 1.0229544145655298 0.978010107055685 1.0245217773082755 1.0461659720279863 1.0960276704844674 1.1382500032110372 1.1733624964904548 1.2722513244423006 1.2413599970663964 1.1863093648360779 1.0 12.748511118236832 -6.719850578504058 1.7238890029963265 1.1361422067613158 1.004557182586796 0.47960321322736543 0.06973957077684549 0.40748218707306183 2.447088472266726 0.015257784866795684 0.03813583165633182 1.906116415393537e-07 6.719850578504058 -0.13158502417451978 AEQDASIPPGTHEALLQTALS(ph)PPPPPTRPVSPPQK ddPTM_A549_PD325901_60min_R1 1 AEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQK 35 1 Q5JQP0;Q5JQP1;Q5JQN9;Q5JQP2;Q5JQP8;Q9UGP5 Q5JQP0 POLL DNA polymerase lambda 1 AEQDASIPPGTHEALLQT(0.008)ALS(0.407)PPPPPT(0.293)RPVS(0.293)PPQK 67.947 0.00020707 5912800.0 1784.4 1511.8 1824.0 2019.0 2496.6 2606.9 2190.7 2213.6 2393.7 2980.7 2236.1 True False 1965.5509743941477 1639.204691662561 1947.7876086030305 2143.7090445183094 2321.24742880243 2585.6702707149393 2274.0682872970374 2169.448011464393 2293.1011133159786 2792.4980933105567 1961.0738758057928 1.0022829831367344 0.8358709541164134 0.9932250042353438 1.0931301828889404 1.1836613895275334 1.3184971268114536 1.1596035801367437 1.1062551177848823 1.1693088881589215 1.4239637413777373 1.0 10.937428169121846 -6.142702226241237 3.169656759809904 1.114598816643189 0.9182796701648724 0.3407075079749521 0.12619648791423133 0.20550770837493817 3.883838502301156 0.014642847479987231 0.04397718020735908 7.199424369273371e-07 6.142702226241237 -0.1963191464783166 AEQDASIPPGTHEALLQTALSPPPPPT(ph)RPVSPPQK ddPTM_A549_MK2206_60min_R1 2 AEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQK 35 1 Q5JQP0;Q5JQP1;Q5JQN9;Q5JQP2;Q5JQP8;Q9UGP5 Q5JQP0 POLL DNA polymerase lambda 1 AEQDASIPPGTHEALLQT(0.018)ALS(0.076)PPPPPT(0.453)RPVS(0.453)PPQK;AEQDASIPPGTHEALLQT(0.006)ALS(0.036)PPPPPT(0.479)RPVS(0.479)PPQK 73.574 1.2214e-05 6215000.0 1545.6200000000001 1635.93 1609.25 1267.89 1455.19 1783.01 1652.17 1262.3400000000001 2252.59 2228.42 2722.2400000000002 True False 1806.4828692190583 1719.1918493780117 1837.4658481108963 1578.5231069177457 1241.1334786785367 1971.6869347337501 1952.347902965123 1441.2805607541147 1742.3819616470646 1725.0183742950958 2046.2326779981222 0.8828335548752858 0.8401741736721445 0.8979750288752756 0.7714289405553098 0.6065456250521651 0.9635692733940199 0.9541182310093645 0.7043580997661291 0.8515072505594418 0.8430216137407804 1.0 10.998754488546863 -10.347627430876567 0.6693957662799597 1.0054850451344626 0.8268048872605366 0.02019250157959096 0.11019002375100595 0.8072725215543384 0.6440747146151862 0.07654031851354434 0.02150264240865171 4.4913052126061635e-11 10.347627430876567 -0.178680157873926 AEQDASIPPGTHEALLQTALSPPPPPT(ph)RPVSPPQK ddPTM_A549_PD325901_60min_R1 1 AEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQK 35 1 Q5JQP0;Q5JQP1;Q5JQN9;Q5JQP2;Q5JQP8;Q9UGP5 Q5JQP0 POLL DNA polymerase lambda 1 AEQDASIPPGTHEALLQT(0.004)ALS(0.038)PPPPPT(0.529)RPVS(0.43)PPQK 89.915 4.1462e-09 5668800.0 2030.9 2200.6 2389.6 1893.0 2576.6 2655.4 2178.9 2168.4 2571.3 2777.0 2567.5 True False 2237.075472930439 2386.0522850063717 2551.772625832128 2009.9263106850726 2395.628504787448 2633.775302795065 2261.8192318398287 2125.1495609231083 2463.237202936614 2601.6597460742155 2251.713776723477 0.9934990388457192 1.0596605615116739 1.1332579887419234 0.8926206924975006 1.0639134198811826 1.1696758842180797 1.0044878950516776 0.9437920498117058 1.093938860435863 1.1554131670588939 1.0 11.136807737681831 -2.258172294410637 15.325901725356891 1.040309265373791 1.0292367638256474 0.0 0.0845622685477077 0.0 0.0 0.009810320104712047 0.0 0.005518584611555711 2.258172294410637 -0.011072501548143654 AEQEEEFISNT(ph)LFK ddPTM_A549_PD325901_60min_R1 1 AEQEEEFISNTLFK 14 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 AEQEEEFIS(0.026)NT(0.974)LFK 91.441 6.8988e-05 877350.0 857.01 1035.9 814.34 751.42 1045.3 929.88 759.29 962.44 618.03 1006.7 984.07 True False 944.0130243025826 1123.1989284913664 869.606009424228 797.833506801361 971.8817340892327 922.3073655807317 788.1851964494305 943.2433791804264 592.0563483572181 943.1367901955034 863.0356285337 1.0938285663900846 1.3014514017221799 1.0076131050368002 0.9244502549180761 1.1261200603507675 1.0686782041058196 0.913270750813103 1.0929367780366144 0.6860161142630039 1.0928132733035547 1.0 9.753276308909983 -8.107347044620854 1.3802754256147984 0.859195194555961 1.0893558171096542 0.044543252723514226 0.1446370603047879 0.3729809465881922 1.402676618440004 0.027221194328256967 0.03766851279958003 7.810034554808413e-09 8.107347044620854 0.23016062255369318 AEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_A549_MK2206_60min_R1 2 AEQGSEEEGEGEEEEEEGGESK 22 0 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 AEQGS(1)EEEGEGEEEEEEGGESK;AEQGS(1)EEEGEGEEEEEEGGESK 213.05 1.1049999999999998e-73 35772000.0 2395.4 3190.6 3034.1 3822.9 4019.3 3797.5 3246.9 3272.2 3377.1 4357.6 4040.1000000000004 True False 2799.6849580927606 3352.987911845545 3464.381003419776 4759.510671616503 3428.0662943345137 4199.348929423514 3836.8197014456473 3736.0443706922183 2612.1922421205372 3373.215133515362 3036.831668912444 0.9219098268608972 1.1041072661911233 1.1407879596633839 1.5672619330003852 1.1288298687830067 1.3828059593857545 1.2634285069938356 1.2302441419251195 0.8601702454769318 1.1107678993361474 1.0 11.56835122703124 -8.752886733224473 24.898656118196467 0.9339692817797278 1.2268449670310395 0.24952353750828427 0.1672462369141393 127.42336194144826 370957.2531869034 0.027329296197111986 0.030747794374672833 1.7664984747009103e-09 8.752886733224473 0.2928756852513117 AEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_A549_PD325901_60min_R1 2 AEQGSEEEGEGEEEEEEGGESK 22 0 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 AEQGS(1)EEEGEGEEEEEEGGESK;AEQGS(1)EEEGEGEEEEEEGGESK 172.06 1.1004e-40 49257000.0 3044.7 3929.8999999999996 3489.0 4672.5 3368.3 4852.0 4428.1 4442.1 3690.4 2914.7 2536.14 True False 3353.795702610323 4261.086464985248 3725.784521061389 4961.109712982567 3131.722228004176 4812.48692067547 4596.613768649296 4353.498830739964 3535.305321711695 2730.665344574186 2224.2108579160586 1.5078587044362388 1.9157745093365879 1.6751040072487586 2.230503324505306 1.4080149896122693 2.1636828646652946 2.066626800372706 1.9573228928568898 1.589465004691168 1.2277007527661483 1.0 11.119077848465384 -9.784977833471501 0.7773238295802106 1.0597091690818718 1.8703603755421772 0.542492522619272 0.25728339376988624 0.2646294553823082 0.3345786557767568 0.0991430011128481 0.0524531277276815 1.640673511560408e-10 9.784977833471501 0.8106512064603053 AEQLASVQYT(ph)LPK ddPTM_A549_MK2206_60min_R1 2 AEQLASVQYTLPK 13 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AEQLASVQYT(1)LPK;AEQLASVQYT(1)LPK 142.1 2.6844e-12 7293200.0 3192.3 3729.2 3810.3999999999996 3110.2 4267.5 3817.6 3070.8 3058.3 6048.299999999999 5087.2 4483.6 True False 3731.0821957583357 3919.000351298942 4350.772016555389 3872.199139622185 3639.7564031230686 4221.575898082214 3628.7246109209705 3491.8233906509445 4678.369707150405 3937.9979867861553 3370.1983789351343 1.107080882561349 1.1628396642150216 1.2909542784630033 1.1489528817723975 1.0799828359875674 1.2526194079459754 1.0767094998329212 1.036088383543238 1.3881585536304861 1.1684766129495399 1.0 11.718617799476494 -11.226998929517256 1.698070800609288 0.9999392448665501 1.2026352537092555 0.0 0.11376687723601449 0.3987092974873799 2.072268238409223 0.08833601817228169 0.018210936824645637 5.929267860701571e-12 11.226998929517256 0.20269600884270544 AEQLASVQYT(ph)LPK ddPTM_A549_PD325901_60min_R1 2 AEQLASVQYTLPK 13 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AEQLASVQYT(1)LPK;AEQLASVQYT(1)LPK 151.56 5.512300000000001e-13 11383500.0 4168.1 4688.9 4686.5 4918.700000000001 5852.1 5599.7 4889.3 5019.1 5407.4 5216.6 5933.3 True False 4591.242443606954 5084.050058695982 5004.554072213874 5222.516927821802 5441.068684649 5554.09789977462 5075.36498702762 4918.990113092221 5180.1457827400345 4887.222985729473 5203.541714287598 0.8823302849673663 0.9770364758941931 0.9617591915276946 1.0036465958333922 1.0456471732914552 1.0673687662625024 0.9753674066053825 0.9453157835913815 0.9955038447211206 0.9392108786810349 1.0 12.345278191445153 -4.714603306377097 1.1513895783021924 1.0001805367383354 0.6335802859327406 0.41926514675456317 0.03697482723095002 3.003733346313365 1.347930197966392 0.004884796427675638 1.8048590710676076 1.9292863589308274e-05 4.714603306377097 -0.3666002508055948 AEQLPKT(ph)PR ddPTM_A549_MK2206_60min_R1 2 AEQLPKTPR 9 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 AEQLPKT(1)PR;AEQLPKT(1)PR 61.435 0.0030231 6233600.0 2889.9 2549.2 2793.3 2444.8999999999996 3474.9 2625.1 2684.7 2323.5 3781.0 3669.1000000000004 4011.8 True False 3377.644468728506 2678.9433914864485 3189.4319425373137 3043.9006097557294 2963.746813172195 2902.886339599647 3172.475238680317 2652.8632404203204 2924.6095370163016 2840.2477616993788 3015.5593399527115 1.120072294376231 0.8883736280674411 1.0576584915047067 1.0093983459146463 0.9828182698665352 0.9626361189911681 1.0520354206427476 0.8797250995107001 0.9698398231693108 0.9418643248266897 1.0 11.55820990938521 -6.757690336100982 5.530491340720396 0.980386865085702 1.0125638999071465 0.10031970689588665 0.0650734146299326 0.41631826252394133 40.27136808639757 0.008361898438103752 0.01689027363154797 1.7470674159873775e-07 6.757690336100982 0.032177034821444406 AEQLT(ph)K ddPTM_A549_MK2206_60min_R1 1 AEQLTK 6 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 AEQLT(1)K 69.19800000000001 0.055554 29396000.0 4493.5 3983.0 3565.5 2589.3 4432.2 4097.9 3916.6 4991.4 4282.1 5211.1 5356.7 True False 5251.8929444726655 4185.717687231493 4071.141514021691 3223.678616238095 3780.2292512998374 4531.537058034131 4628.195522708436 5698.9462355214055 3312.211187108568 4033.9088907338705 4026.483552600999 1.30433736431882 1.0395466993842886 1.0110910577026557 0.8006188462276684 0.9388413492606749 1.1254328991625662 1.1494385764270036 1.4153655816723854 0.8226064117333771 1.001844124789253 1.0 11.975304724941262 AEQPS(ph)PPNS(ph)DSGQDAHPDPDANPDAAR ddPTM_A549_PD325901_60min_R1 2 AEQPSPPNSDSGQDAHPDPDANPDAAR 27 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 2 AEQPS(0.964)PPNS(0.86)DS(0.176)GQDAHPDPDANPDAAR;AEQPS(0.992)PPNS(0.851)DS(0.157)GQDAHPDPDANPDAAR 104.98 7.1852e-13 25828000.0 629.3 834.03 972.68 750.23 1166.55 850.52 808.8199999999999 1225.71 1071.21 956.9100000000001 837.5 True False 693.1860727338255 904.3166351285397 1038.691913999998 796.5700032040472 1084.615552379025 843.5936471090072 839.6000877032865 1201.262252499107 1026.19076893312 896.4905392927177 734.4928093499176 0.9437615507051026 1.2312123735138119 1.4141621276310654 1.0845170886139412 1.476686413498034 1.1485390140928027 1.1431018479900394 1.6354989963241657 1.3971420221817792 1.2205572714676138 1.0 9.520604556708772 -10.904151023543086 1.221018942191875 1.0037379202885588 1.2901989346760947 0.05302146996805723 0.19790030530011046 0.521520830947609 1.4094658715924684 0.12100350120231913 0.030443213291327237 1.246949818824858e-11 10.904151023543086 0.2864610143875359 AEQS(ph)LHDLQER ddPTM_A549_MK2206_60min_R1 2 AEQSLHDLQER 11 0 E9PNJ4;G0XQ39;Q13586;Q13586-2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AEQS(1)LHDLQER;AEQS(1)LHDLQER 41.378 0.027583 4338400.0 571.21 566.39 462.18000000000006 559.35 546.09 337.04999999999995 508.28999999999996 434.49 485.11 706.06 730.1500000000001 True False 667.6162832563101 595.2168317527104 527.7240737485754 696.3907751101756 465.76088440104854 372.71640728431726 600.6397135876705 496.0802880698191 375.2333595614856 546.5605556200333 548.8336038851565 1.2164274900995473 1.0845123686654936 0.9615374678460863 1.2688559340763241 0.8486376947474759 0.679106389706976 1.0943931081037712 0.9038810389125225 0.6836923922027253 0.9958584018015068 1.0 9.100225007062186 -6.7830191191207385 24.953209912835362 0.8569595462946513 1.117146390433197 0.40308549358508705 0.14084290801039054 178.7845803271452 206732.86651529418 0.02238659685209206 0.04233353614652425 1.6480898354064148e-07 6.7830191191207385 0.26018684413854576 AEQS(ph)LHDLQER ddPTM_A549_PD325901_60min_R1 1 AEQSLHDLQER 11 0 E9PNJ4;G0XQ39;Q13586;Q13586-2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AEQS(1)LHDLQER 40.236999999999995 0.031427 2154400.0 230.02 274.38 249.47 367.6 476.58 409.34 245.21 418.55 302.8 345.69 481.75 True False 253.3714610682258 297.50296553669375 266.40053438497716 390.3058171198269 443.1066649117449 406.0064707562442 254.54160073406058 410.20169190387696 290.0743690153645 323.8630744041755 422.4978040648631 0.5996988827646723 0.7041526906753348 0.6305370863988646 0.9238055520399959 1.0487786223942548 0.9609670555682057 0.6024684584987396 0.9708966246861288 0.6865701223167338 0.7665438051707723 1.0 8.722800032771996 -11.00681376804592 1.258771373891043 1.0011862037626371 0.7885962061487937 0.0 0.16836881535076753 0.6359660622671167 1.777298608182736 0.11680066220134819 0.025913872383642067 9.844331548900286e-12 11.00681376804592 -0.21258999761384345 AERS(ph)PNQGK ddPTM_A549_MK2206_60min_R1 2 AERSPNQGK 9 1 Q9P2E9;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AERS(1)PNQGK;AERS(1)PNQGK 78.692 0.00050541 20118200.0 7138.3 5583.3 4457.2 3124.6000000000004 2303.18 1556.83 1870.94 1655.68 2234.82 7999.0 8721.4 True False 8343.070525320845 5867.466121797539 5089.297982414103 3890.1271402686266 1964.3852730040976 1721.5727172598831 2210.865580160374 1890.3777103073458 1728.6368382742053 6192.020344453232 6555.6356816051575 1.272656219858458 0.8950262654560573 0.7763241018250088 0.5934019718612739 0.2996483283102631 0.2626095776021454 0.33724655968359735 0.28835917706831504 0.26368714221333084 0.9445339315953424 1.0 12.678519965983847 -3.3451079106348014 14.333907037914448 0.608464089832933 0.9856981645610952 0.0 0.3474316139699621 0.0 0.0 0.05125178970521657 0.0 0.00045174368413091766 3.3451079106348014 0.37723407472816217 AERS(ph)PNQGK ddPTM_A549_PD325901_60min_R1 2 AERSPNQGK 9 1 Q9P2E9;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 AERS(1)PNQGK;AERS(1)PNQGK 80.555 0.00046388 45011000.0 11419.2 9885.1 8096.799999999999 8801.8 9955.7 7722.5 5355.700000000001 8073.0 8551.3 11831.5 13176.5 True False 12578.468777629261 10718.152068761463 8646.29753801372 9345.467195661839 9256.445977300471 7659.610520386717 5559.5140942514945 7911.977681854014 8191.918598946788 11084.457070823573 11555.874032715446 1.0884913371345846 0.927506827992211 0.7482166657005327 0.8087200647224261 0.8010165177549408 0.6628326424034955 0.48109853729039803 0.6846715064091803 0.7088964950426876 0.9592054256945636 1.0 13.496338762243463 -5.454093382241142 2.8306676052407456 0.7960723536484522 1.0929767336779475 0.32468107264562274 0.13778847574794148 0.369629320442929 4.988750651135646 0.023342692641378695 0.2013508814884154 3.5148485593317805e-06 5.454093382241142 0.29690438002949526 AES(ph)DGEEKEEVKEELGR ddPTM_A549_MK2206_60min_R1 2 AESDGEEKEEVKEELGR 17 2 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 AES(1)DGEEKEEVKEELGR;AES(1)DGEEKEEVKEELGR 112.37 6.9167e-10 28324000.0 3146.8999999999996 2924.0 2525.17 2404.8 4652.0 3359.5 2852.7 3980.2999999999997 4559.299999999999 3186.6 3065.6000000000004 True False 3678.0197856817667 3072.8191105862134 2883.27707669672 2993.976107955574 3967.6969624671356 3715.0000601443826 3370.9986640530974 4544.519714157523 3526.6258297060094 2466.744846810185 2304.3269137442126 1.5961362789906808 1.3334996402890194 1.2512448036341308 1.2992844418463079 1.7218463833415791 1.6121844682654083 1.4628994887603386 1.9721679623892023 1.5304364188394304 1.070483893625174 1.0 11.170129690409563 -10.499003276873497 0.9491644701388989 1.0173544317830328 1.523281906213356 0.4806449016187063 0.19703531141009945 0.3688760150249002 0.6237690587853953 0.11651350419190007 0.03827135138049836 3.1695435478595205e-11 10.499003276873497 0.5059274744303233 AES(ph)DGEEKEEVKEELGR ddPTM_A549_PD325901_60min_R1 2 AESDGEEKEEVKEELGR 17 2 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 AES(1)DGEEKEEVKEELGR;AES(1)DGEEKEEVKEELGR 123.19 1.0792e-10 47466000.0 5464.6 5134.1 5780.9 5236.9 6170.799999999999 4557.6 4254.299999999999 4478.3 4854.0 5256.9 5476.9 True False 6019.362169174103 5566.768625125518 6173.226637375695 5560.3714191371655 5737.384296104316 4520.484416667467 4416.199714542283 4388.976793341615 4650.003260239693 4924.978436851835 4803.276020929628 1.2531784854639922 1.1589524734512597 1.2852117201836186 1.1576206311918358 1.1944731618804407 0.9411252647089329 0.9194141030620117 0.9137465292890186 0.9680899536020687 1.0253373771134335 1.0 12.229803000292259 -7.253206208853829 19.361958021079023 0.9704507693584515 1.2083389717376627 0.8764161249513495 0.046412191997311975 7.3846746754350265 17365.581355493752 0.006720300784465473 0.011460994091778457 5.582050885294871e-08 7.253206208853829 0.23788820237921116 AES(ph)EASSR ddPTM_A549_PD325901_60min_R1 2 AESEASSR 8 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 AES(1)EASSR;AES(1)EASSR 83.869 0.0032698999999999996 7515600.0 1208.35 1124.4499999999998 951.53 730.8199999999999 845.96 824.99 532.31 576.29 1168.42 1047.25 1433.59 True False 1331.0208024597448 1219.2113477576177 1016.1065478147156 775.9610915873558 786.5426880035666 818.2715549645623 552.567348341209 564.7954438592405 1119.3153706900014 981.1264562751973 1257.2675182757598 1.0586615681323985 0.9697310477166123 0.8081864305285028 0.6171805763752836 0.6255969207589535 0.6508332897096993 0.4394986272285235 0.44922455694537594 0.8902762176064577 0.7803641166366346 1.0 10.296075940169448 -8.968256496717594 15.636284283959501 0.9516074670588175 0.6970956598124247 0.15057349828659905 0.18841499435230308 3.2816109087524157 1616.2664229605361 0.03486001083059846 0.03664043124197242 1.0758296350409578e-09 8.968256496717594 -0.2545118072463928 AES(ph)GDSLGSEDRDLLYSIDAYR ddPTM_A549_MK2206_60min_R1 2 AESGDSLGSEDRDLLYSIDAYR 22 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AES(0.985)GDS(0.006)LGS(0.009)EDRDLLYSIDAYR;AES(0.981)GDS(0.009)LGS(0.009)EDRDLLYSIDAYR 118.57 1.3382e-15 6847100.0 933.47 765.45 1001.71 784.6800000000001 1519.4 1002.03 798.99 1273.12 1269.25 1886.94 1222.73 True False 1091.0169148496489 804.4081354987062 1143.7675406003839 976.9266352256244 1295.8982727370087 1108.0641495063185 944.1561407059215 1453.588658766481 981.7669015757574 1460.6789434632542 919.0923953687566 1.1870590164244728 0.8752200970784477 1.244453274081855 1.0629253817660669 1.40997605819279 1.2056069173129682 1.0272701041412806 1.581547911930307 1.0681917362419855 1.5892623536257235 1.0 9.844066091158362 -8.979009009187035 24.959828498043485 1.030084363225418 1.1955427057979113 0.0 0.24488250938775558 189.73587688689506 225612.70898820212 0.03027402918959611 0.030968627160886424 1.0495206567294436e-09 8.979009009187035 0.16545834257249337 AES(ph)GKEEDKK ddPTM_A549_PD325901_60min_R1 1 AESGKEEDKK 10 2 Q99442 Q99442 SEC62 Translocation protein SEC62 1 AES(1)GKEEDKK 81.431 0.00036723 19063000.0 3341.8 3544.4 2637.9 2592.4 2868.1 2102.0 1645.6 2051.8 2907.5 3368.1 4335.4 True False 3681.0570758968665 3843.099027072882 2816.9237569813235 2752.526660232424 2666.654550407855 2084.8820089158776 1708.2242085068729 2010.875239394039 2785.3078861036092 3155.4375911964567 3802.173284364936 0.9681455316710271 1.0107637763055772 0.7408720082708762 0.7239350903734966 0.7013500834834404 0.5483395555613422 0.44927573804469345 0.5288752218798225 0.7325567978601032 0.8299036775025624 1.0 11.892608569093861 -5.760157572714885 24.99435663271343 0.7702623472923659 0.989454723497742 0.24710168560859047 0.15868068198117952 48.48140583218575 945237.4378232791 0.028946496616155608 0.10104328361145877 1.7371704262556673e-06 5.760157572714885 0.21919237620537613 AES(ph)GPDLR ddPTM_A549_MK2206_60min_R1 2 AESGPDLR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 AES(1)GPDLR;AES(1)GPDLR 85.67 0.0029346 153391000.0 1561.41 1536.0700000000002 1583.28 1169.89 1980.99 1510.55 1409.38 1623.4099999999999 2470.22 2172.44 2300.06 True False 1824.937835190622 1614.2494019145574 1807.812911602934 1456.513102518358 1689.5889952015848 1670.3953983780623 1665.4461026897864 1853.5333389846148 1910.71911413076 1681.684295174893 1728.891623573366 1.055553633500024 0.9336903365742152 1.045648487709397 0.8424548321357233 0.9772671532235501 0.9661654759629175 0.9633027773294158 1.0720934231572206 1.1051699759997584 0.9726950331907431 1.0 10.755631720424399 -8.254486653202788 24.232732793642636 1.0527334962770372 0.9660567023032828 0.20164698465209074 0.06260569015366174 336.49123717318287 1172791.5703249325 0.009871199291959176 0.012598151483511351 5.565617383266358e-09 8.254486653202788 -0.08667679397375438 AES(ph)GPDLR ddPTM_A549_PD325901_60min_R1 2 AESGPDLR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 AES(1)GPDLR;AES(1)GPDLR 99.855 0.0023991999999999998 217720000.0 5584.400000000001 5230.48 4720.8 5144.75 4879.88 4811.13 4887.58 6390.860000000001 5885.47 5123.9800000000005 6005.2 True False 6151.324176981999 5671.270905971156 5041.181876476531 5462.529522925 4537.134063472085 4771.9497524050685 5073.579531486398 6263.389283767315 5638.124163173243 4800.451028336101 5266.598470099253 1.1679880689415976 1.0768375334040372 0.9571988267375026 1.0372025803634226 0.8614923065108054 0.9060781412324258 0.9633503598748402 1.1892665293029785 1.070543766566466 0.9114898459774993 1.0 12.362655756062328 -5.425849652829416 3.4888360426194405 1.0161112499307272 1.1660955124724461 0.23113778553766062 0.08906974766758256 0.3120827105731646 6.3837029174241415 0.01218617709895888 0.09326429989024332 3.751028355538832e-06 5.425849652829416 0.14998426254171893 AES(ph)IDKK ddPTM_A549_PD325901_60min_R1 1 AESIDKK 7 1 Q9NZZ3-2;Q9NZZ3 Q9NZZ3-2 CHMP5 Charged multivesicular body protein 5 1 AES(1)IDKK 70.1 0.0090006 17229000.0 12729.0 11289.0 8725.2 8690.7 9228.1 7851.2 7279.8 6874.7 8524.5 11155.0 13826.0 True False 14021.238709405461 12240.36364874895 9317.344540889897 9227.504800988245 8579.950091216737 7787.262430257067 7556.83677265941 6737.578715402179 8166.244909747272 10450.671396275788 12125.489650235173 1.1563441241429389 1.0094737616234366 0.7684097557832799 0.7610005919067588 0.7075961745635838 0.6422225126476466 0.6232191021261434 0.555654155811473 0.6734775374278504 0.8618762373916254 1.0 13.565755386783454 -5.600563917478081 2.846305206911723 0.7759080345536 1.144353074325532 0.5407725744493426 0.12215955922292518 0.233841895932558 3.540451749657331 0.023435731438986397 0.1388599315135036 2.5086269440401285e-06 5.600563917478081 0.3684450397719319 AES(ph)KESVGSR ddPTM_A549_MK2206_60min_R1 1 AESKESVGSR 10 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AES(0.981)KES(0.018)VGS(0.001)R 54.729 0.0051869 26179000.0 2448.4 2557.5 2384.2 2468.4 2924.2 2182.3 2274.9 1990.7 2849.3 3488.8 3768.9 True False 2861.6300623671673 2687.665826034283 2722.3154109467164 3073.1581108106875 2494.054053664318 2413.2295375065014 2688.219883217439 2272.887821263066 2203.938099397128 2700.6776569231697 2832.9781136516704 1.0101137204616681 0.9487068795494216 0.9609376782080709 1.0847800397756793 0.8803647446642346 0.8518348680060508 0.9489024536629265 0.8022962868334145 0.7779580395544539 0.9532998662817175 1.0 11.46810374079103 -6.798247009731958 24.69429039533477 0.8857013722460468 0.9945185844491315 0.38007253375946926 0.06940350166758333 159.392266929238 106936.04959816964 0.01306434764272418 0.024689820426215654 1.5913033984223618e-07 6.798247009731958 0.10881721220308471 AES(ph)LDDQMLSR ddPTM_A549_PD325901_60min_R1 3 AESLDDQMLSR 11 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AES(0.985)LDDQMLS(0.015)R;AES(1)LDDQMLSR;AES(1)LDDQMLSR 182.1 1.5585e-18 19903500.0 3771.24 3705.98 3399.11 4120.17 4904.0 3833.67 4028.96 4497.24 3769.39 4049.0 4831.9400000000005 True False 4154.093508559845 4018.2959407379394 3629.794045108907 4374.663543315011 4559.5599578815645 3802.4498625692395 4182.284277531509 4407.539020183472 3610.9756467068178 3793.3454489933356 4237.642012191333 0.9802841997056083 0.9482386499797874 0.8565598591542892 1.0323343809433356 1.0759662908674448 0.897303229397367 0.9869366656030489 1.0400923455788287 0.8521190880018533 0.8951547672220083 1.0 12.049046001430517 -8.75109484434945 24.9982295079273 0.9301673425056824 0.9750161832639821 0.12968260856939062 0.06799954761871127 471.45872067819016 1139308.9847574467 0.01322515556504304 0.014914814321635717 1.7738020629485257e-09 8.75109484434945 0.044848840758299646 AES(ph)LPLSSNLQSK ddPTM_A549_MK2206_60min_R1 2 AESLPLSSNLQSK 13 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 AES(0.971)LPLS(0.029)SNLQSK;AES(0.993)LPLS(0.006)S(0.001)NLQSK 169.3 1.2849e-21 16390300.0 4339.8 6207.8 5135.7 4705.1 9644.900000000001 8384.4 8002.0 8432.7 12148.4 13607.7 13126.5 True False 5072.252142076878 6523.7505043423735 5864.019484942136 5857.849711219966 8226.147986521772 9271.631642885719 9455.859820434278 9628.061049060652 9396.806797008421 10533.711119041905 9866.82777703007 0.514071214852362 0.6611801332470437 0.5943165947006338 0.5936912900068058 0.8337176012813567 0.9396770524838829 0.9583485223536055 0.9758010646009991 0.9523635163556968 1.067588424271916 1.0 13.268370611901235 -6.941350563442912 2.1006909392362387 0.9740965038523027 0.5895032209112891 0.9402669953852709 0.04599926461321281 0.04220182035794591 0.3751937577311352 0.00544453673617804 0.01138933596138957 1.1445886540210047e-07 6.941350563442912 -0.3845932829410136 AES(ph)LPLSSNLQSK ddPTM_A549_PD325901_60min_R1 2 AESLPLSSNLQSK 13 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 AES(0.956)LPLS(0.044)SNLQSK;AES(0.97)LPLS(0.028)S(0.003)NLQSK 198.16 2.0386e-30 38656000.0 11653.2 11696.7 10609.4 11814.9 12700.5 13427.900000000001 11783.7 14066.8 13196.2 13069.0 14587.8 True False 12836.224285367567 12682.421958572215 11329.417683504937 12544.679539415252 11808.460694346411 13318.547634406055 12232.135151788063 13786.226638808881 12641.609605021644 12243.821109630506 12793.593079683262 1.0033322308610866 0.9913104066685073 0.8855540123045266 0.980543891093168 0.922997989759321 1.0410326130785292 0.956114132722666 1.077588332921262 0.9881203447917244 0.9570275553842793 1.0 13.643133881474157 -7.25590579030894 24.959373640007545 1.0009182063362136 0.9560346629506166 0.2128997973058937 0.04444299999366673 535.6159491534715 2415905.5575353475 0.005863119603555677 0.009971699487357096 5.5474603865157554e-08 7.25590579030894 -0.04488354338559708 AES(ph)LSR ddPTM_A549_MK2206_60min_R1 1 AESLSR 6 0 Q6NT89;C9JF90;C9K0L6;A0A087WYZ5;Q9BPX7;Q9BPX7-2 Q6NT89 TRNP1;C7orf25;ADGRD1 TMF-regulated nuclear protein 1;UPF0415 protein C7orf25 1 AES(0.996)LS(0.004)R 78.77 0.043836 3809900.0 896.49 796.29 748.27 739.14 819.14 740.03 646.23 735.57 1015.9 1331.7 1266.6 True False 1047.7955949238456 836.8177597704158 854.3859376516641 920.2293331812555 698.6455911081965 818.3394834078429 763.6416260633897 839.8393000886482 785.8002720589425 1030.8680450941831 952.0682636183511 1.100546709688317 0.8789472265256234 0.8973998717324704 0.9665581433036206 0.7338188004009107 0.8595386640635727 0.8020870511544593 0.8821208858457534 0.8253612709161164 1.082766944857874 1.0 9.894921208741694 -5.259270382649713 24.174908827812864 0.891553720318813 1.1005468225060626 0.29757282354450465 0.09171191659090942 111.19365241320428 1239183.7614589052 0.011717809666885319 0.10632452469204218 5.504648817939598e-06 5.259270382649713 0.20899310218724965 AES(ph)PAEKVPEESVLPLVQK ddPTM_A549_MK2206_60min_R1 2 AESPAEKVPEESVLPLVQK 19 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK 177.22 4.439999999999999e-35 58778000.0 7772.5 7885.5 7722.6 6940.8 12903.8 8984.4 7960.2 9591.9 14673.0 10975.7 11215.099999999999 True False 9084.307980619515 8286.838268306288 8817.780803865908 8641.29631158435 11005.66811356049 9935.123244637945 9406.46530150224 10951.581198961767 11349.588927966193 8496.281747045292 8430.081148986403 1.0776062317871962 0.9830081255270791 1.045990026433627 1.0250549382461571 1.3055233892835973 1.1785323378331303 1.115821441722804 1.2991074469405954 1.3463202461972528 1.007852901637471 1.0 13.04133080345421 -6.725977732146905 24.76581067797187 1.183157306424091 1.0302838207626648 0.2964305674597605 0.10813385206091071 193.71678717737728 135287.518601271 0.01925623413291917 0.04008380598244712 1.8794131786623657e-07 6.725977732146905 -0.15287348566142622 AES(ph)PAEKVPEESVLPLVQK ddPTM_A549_PD325901_60min_R1 4 AESPAEKVPEESVLPLVQK 19 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK 162.77 2.2006000000000003e-27 93339000.0 10123.6 10168.100000000002 11504.4 11051.3 12439.3 11102.199999999999 11239.5 11700.100000000002 11165.4 12167.2 11871.8 True False 11151.340419399574 11025.001471950054 12285.157765577149 11733.913701676674 11565.606481255325 11011.787364122683 11667.225322990398 11466.732326949112 10696.157066724407 11398.960915532653 10411.643861540711 1.0710451267538268 1.0589107367257353 1.1799441019066124 1.1269991422795644 1.1108338543903913 1.0576415703958935 1.120593969419915 1.1013373564673838 1.027326444216427 1.0948281623076799 1.0 13.345910248730616 -8.818923591071666 3.1214087795040766 1.0112893609135496 1.1051625601948936 0.24427110452624 0.041635569492051216 0.1223402105932287 2.3228530000200998 0.006199192884129319 0.006618584443587997 1.5173172978378465e-09 8.818923591071666 0.09387319928134397 AES(ph)PDLR ddPTM_A549_MK2206_60min_R1 2 AESPDLR 7 0 Q6UN15;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AES(1)PDLR;AES(1)PDLR 96.66799999999999 0.011739 654040000.0 10453.3 11310.4 10080.8 9599.3 14157.9 11261.599999999999 9888.3 9613.900000000001 16432.8 16414.4 15992.3 True False 12217.561481352195 11886.051049375626 11510.409023853548 11951.12893092895 12075.291664856722 12453.29503715493 11684.87611377159 10976.69976633395 12710.797037789334 12706.375639704102 12020.970544973758 1.0163539986761416 0.9887763225861539 0.9575274293194499 0.9941900187024407 1.0045188630718074 1.035964191956359 0.9720409903722211 0.9131292457016758 1.0573852577239704 1.057017450643112 1.0 13.553265760115572 AES(ph)PDLR ddPTM_A549_PD325901_60min_R1 2 AESPDLR 7 0 Q6UN15;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AES(1)PDLR;AES(1)PDLR 94.85 0.011106 399140000.0 6229.0 6400.2 6272.0 5792.8 7016.4 6568.9 6448.7 6073.0 7044.3 6885.3 7497.4 True False 6861.36349445256 6939.567315503857 6697.655636599893 6150.608099596669 6523.592269265946 6515.405056311855 6694.108807364038 5951.869250823667 6748.252568213118 6450.560982947354 6575.267329934415 1.043510955549392 1.0554045892417085 1.018613434332669 0.9354156707204204 0.9921409947192239 0.9908958418542114 1.018074014555817 0.9051904587555429 1.0263084722793208 0.9810340263399899 1.0 12.682833835756057 -5.95772207209801 6.039549733692962 0.9976115962392167 1.0474502548545885 0.2910810841047382 0.03580388854449871 0.21044247448754175 19.234773262164452 0.0050813777516528266 0.016009296680252454 1.1022444681450715e-06 5.95772207209801 0.049838658615371845 AES(ph)PDLRR ddPTM_A549_MK2206_60min_R1 4 AESPDLRR 8 1 Q6UN15;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AES(1)PDLRR;AES(1)PDLRR;AES(1)PDLRR;AES(1)PDLRR 106.16 0.0010564 336178000.0 8919.05 9515.8 8011.5199999999995 7298.75 11270.2 8016.620000000001 8056.500000000001 8554.529999999999 12545.9 12444.3 12101.1 True False 10424.367590163325 10000.11357473197 9147.674004323391 9086.944077653332 9612.368509543663 8864.933407398325 9520.261764974852 9767.16082464938 9704.273681685487 9633.123987058294 9096.062896630381 1.1460307287480402 1.0993892289857068 1.0056740051470103 0.998997498249443 1.0567614383036583 0.9745901614952907 1.0466354370198576 1.073778945423476 1.0668652791836362 1.0590432472302787 1.0 13.151026514743503 AES(ph)PDLRR ddPTM_A549_PD325901_60min_R1 4 AESPDLRR 8 1 Q6UN15;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AES(1)PDLRR;AES(1)PDLRR;AES(1)PDLRR;AES(1)PDLRR 96.14299999999999 0.0010424000000000002 356179000.0 5774.82 5679.139999999999 5896.82 5586.52 6299.0599999999995 6066.35 6416.7 6160.3 5949.65 5989.9 6437.25 True False 6361.075475202204 6157.741058743565 6297.013665659278 5931.586652492534 5856.635756177291 6016.9476568919345 6660.891029852968 6037.4279838381435 5699.606900965204 5611.696691757268 5645.509059089862 1.1267496710434297 1.090732650376135 1.115402278120593 1.050673480532647 1.0373972824908488 1.0657936412667726 1.1798565833719166 1.0694213614124402 1.009582455950228 0.9940107496102318 1.0 12.46288796024177 -8.704778716187244 4.115108939422138 1.0042211341777583 1.0927151724565787 0.5500481548394245 0.0370040903323551 0.1233153822963856 4.245386038513571 0.006501900865480628 0.0072647810096985975 1.9734279905111768e-09 8.704778716187244 0.08849403827882041 AES(ph)PEEVACR ddPTM_A549_MK2206_60min_R1 4 AESPEEVACR 10 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AES(1)PEEVACR;AES(1)PEEVACR;AES(1)PEEVACR;AES(1)PEEVACR 255.13 5.363899999999999e-58 185494700.0 9591.8 10689.4 8511.1 8687.9 12381.499999999998 11399.900000000001 10715.0 10267.5 14166.699999999999 12318.9 14672.5 True False 11210.661343004977 11233.444801881082 9718.101960451551 10816.435890014658 10560.19775167387 12606.229851358825 12661.776802793464 11722.949567899994 10957.965069571226 9536.051934152383 11028.913309600714 1.0164792331123005 1.0185450267436886 0.8811477330220652 0.9807345099538417 0.9575012020886206 1.143016496501523 1.148052981046767 1.0629287980435134 0.9935670688455112 0.8646411179831481 1.0 13.429003027225422 AES(ph)PEEVACR ddPTM_A549_PD325901_60min_R1 4 AESPEEVACR 10 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AES(1)PEEVACR;AES(1)PEEVACR;AES(1)PEEVACR;AES(1)PEEVACR 161.67 7.8666e-09 114600100.0 4698.4 4660.299999999999 4068.2 3683.65 4082.03 3728.18 3634.8500000000004 4535.1 4512.1 4201.799999999999 5210.2 True False 5175.3781092207255 5053.039836324272 4344.292516073932 3911.1806943238616 3795.3222950390036 3697.8189381541415 3773.1762058162412 4444.643872782877 4322.472128250417 3936.4976309163244 4569.378430179035 1.1326219065243732 1.1058484022576975 0.9507403648998529 0.8559546454922571 0.8305992495548892 0.8092608206252805 0.8257526189767571 0.972702073312131 0.9459650134692513 0.8614952101400117 1.0 12.157782214346588 -5.756163401592947 4.445712045653861 0.9337661613993051 1.1253428999005992 0.556610612870997 0.07085484529053838 0.1354075607505707 6.4085912477025575 0.011659070927025532 0.04472332649754591 1.7532207353170895e-06 5.756163401592947 0.19157673850129409 AES(ph)PEEVACRKEEEER ddPTM_A549_MK2206_60min_R1 2 AESPEEVACRKEEEER 16 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AES(1)PEEVACRKEEEER;AES(1)PEEVACRKEEEER 103.1 2.2197e-07 41910000.0 1466.52 1787.88 1440.37 1410.0 2110.25 1391.78 1343.03 967.5799999999999 2134.2 2422.3 2862.6000000000004 True False 1714.0327230283858 1878.8754553470862 1644.6361246813685 1755.4500632973047 1799.8350204312712 1539.057235811207 1587.0411665380964 1104.7374280894742 1650.8071076170822 1875.1007476395869 2151.7374162591923 0.796580804923791 0.8731899353284109 0.7643293797161262 0.8158291295362445 0.8364566265526463 0.7152625706936243 0.7375626572954131 0.5134164697521812 0.7671972867800104 0.8714356749437672 1.0 11.071286316378844 -10.411839897015135 0.9804230117468277 0.9874476516082273 0.7601374852540044 0.31419463094445976 0.09558125395018847 0.34491444179646896 0.6376638557717681 0.04759634584237044 0.017592302063407134 3.874004340594699e-11 10.411839897015135 -0.22731016635422296 AES(ph)PEEVACRKEEEER ddPTM_A549_PD325901_60min_R1 4 AESPEEVACRKEEEER 16 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AES(1)PEEVACRKEEEER;AES(1)PEEVACRKEEEER;AES(1)PEEVACRKEEEER;AES(1)PEEVACRKEEEER 60.034 0.0014167 67051500.0 2709.9 2912.52 2823.24 3275.04 2959.38 3559.44 3063.52 3252.62 3373.3199999999997 3940.4000000000005 4453.0599999999995 True False 2985.007053077058 3157.968281889829 3014.8420439212823 3477.331782644499 2751.5233581067596 3530.4531007685705 3180.1039300224697 3187.7439424689705 3231.5510914362935 3691.6024715271305 3905.3618502731256 0.7643355897657214 0.8086237339746055 0.7719750843856982 0.8903993831970547 0.704550170661991 0.9040015333077688 0.8142917486122485 0.8162480365925714 0.8274652171373804 0.9452651541800037 1.0 11.931240511751266 -11.381846676990305 0.32686752863784174 1.1321064488646053 0.7949943612000889 0.5676533387971365 0.05406827910924409 2.0585015907138464 0.19702760667162522 0.26314662412818873 0.018269077269251487 4.151005635716715e-12 11.381846676990305 -0.3371120876645164 AES(ph)PESSAIESTQS(ph)TPQK ddPTM_A549_MK2206_60min_R1 1 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 AES(0.993)PES(0.001)S(0.002)AIES(0.002)T(0.002)QS(0.563)T(0.437)PQK 150.45 8.9746e-42 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AES(ph)PESSAIESTQS(ph)TPQK ddPTM_A549_PD325901_60min_R1 1 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 AES(1)PESSAIEST(0.004)QS(0.916)T(0.08)PQK 178.52 7.577699999999999e-31 14535000.0 3509.8 3530.0 3362.4 3665.3 3943.9 2898.3 3758.8 3349.2 3406.4 4591.9 3505.6 True False 3866.112312221802 3827.485488536077 3590.592683753745 3891.6972564997322 3666.8940697163757 2874.697205728303 3901.8431908942835 3282.3975786034284 3263.2408540750907 4301.966650341444 3074.4334238293386 1.2575039948031768 1.2449401111990188 1.1678876035902277 1.265825835204607 1.1927056352220833 0.9350331620281906 1.269125934115812 1.0676430828399794 1.0614121056524894 1.399271363952048 1.0 11.586104850579135 -6.459140962495286 0.21540324174961234 0.978075842262355 1.3988581081034168 0.0 0.14501903477013964 3.9664208884422787 0.2521047406114099 0.08397888591073092 0.45500302863571196 3.4742337710688713e-07 6.459140962495286 0.4207822658410618 AES(ph)PESSAIESTQST(ph)PQK ddPTM_A549_MK2206_60min_R1 3 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 AES(0.993)PES(0.003)S(0.004)AIES(0.021)T(0.004)QS(0.216)T(0.759)PQK;AES(1)PESSAIESTQS(0.198)T(0.801)PQK;AES(0.998)PES(0.002)SAIES(0.003)T(0.002)QS(0.203)T(0.792)PQK 155.79 2.2895e-22 14438100.0 2056.9 2021.32 1965.8600000000001 1642.08 3115.2 2774.0 2611.0 3012.3 3415.0 3701.5 3938.2000000000003 True False 2404.054433623193 2124.196554244228 2244.6485084152796 2044.3896737157713 2656.958206680485 3067.542838767828 3085.3849026685725 3439.3027497818493 2641.507952634401 2865.328579196604 2960.2362512093737 0.8121157332091455 0.717576697932947 0.7582666780390422 0.6906170657428296 0.89754937822784 1.036249332300628 1.0422765755294263 1.161833873352763 0.8923301143803102 0.9679391562163338 1.0 11.531496604045687 -6.930497423005048 4.506067071437671 0.9786613751095806 0.7448669420500275 0.7448188129481015 0.07247771394025951 0.10404603133116354 4.1344082909405255 0.01217683560684893 0.02341901303077461 1.1735526460388327e-07 6.930497423005048 -0.23379443305955316 AES(ph)PESSAIESTQST(ph)PQK ddPTM_A549_PD325901_60min_R1 3 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 AES(0.997)PES(0.001)S(0.001)AIES(0.001)T(0.002)QS(0.145)T(0.852)PQK;AES(0.958)PES(0.042)SAIEST(0.001)QS(0.243)T(0.755)PQK;AES(0.992)PES(0.003)S(0.005)AIESTQS(0.234)T(0.766)PQK 256.11 1.5023999999999997e-86 42681100.0 5504.3 5592.719999999999 6139.1 5624.599999999999 6155.6 5635.3 6451.0 6191.389999999999 5591.7 5759.5 7571.1 True False 6063.092483948507 6064.038142052549 6555.7362434072775 5972.018767606583 5723.251891667163 5589.407985177762 6696.496335122652 6067.897869398507 5356.70029466055 5395.8441870775805 6639.902697157209 0.9131297189858435 0.9132721394620422 0.9873241435019874 0.8994135968533737 0.8619481568784888 0.8417906466567344 1.008523263148069 0.9138534322191801 0.80674379414535 0.8126390450552451 1.0 12.69694638476481 -6.140420362522599 0.004950256115870687 1.7948621245471932 6.121212047882716e-07 0.0 0.07034026925748542 62069.82334891353 60.257583488505574 10618.64310238333 11234.930001137664 7.237351029158119e-07 6.140420362522599 -1.7948615124259883 AES(ph)PESSAIESTQSTPQK ddPTM_A549_MK2206_60min_R1 2 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 AES(0.973)PES(0.026)S(0.001)AIESTQSTPQK;AES(0.999)PES(0.001)SAIESTQSTPQK 333.27 1.534099999999999e-195 101515000.0 5088.8 5107.3 4709.1 3748.3 7093.2 4831.4 4262.0 4602.3 7717.6 6451.4 6901.9 True False 5947.665030785019 5367.239754957922 5376.921190206017 4666.633668267582 6049.799676305224 5342.655541176238 5036.350231778418 5254.690118952631 5969.575922474745 4994.024259308111 5187.967747250511 1.1464344653910248 1.034555343525877 1.0364214760308883 0.8995109252058819 1.1661212966313181 1.0298166452572315 0.9707751622873048 1.012860984291485 1.1506578709242106 0.9626166743142949 1.0 12.340953795279768 AES(ph)PESSAIESTQSTPQK ddPTM_A549_PD325901_60min_R1 2 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 AES(0.969)PES(0.031)SAIESTQSTPQK;AES(0.645)PES(0.352)S(0.003)AIESTQSTPQK 433.68 0.0 158306000.0 12638.8 12996.7 12146.2 12842.900000000001 13883.8 12149.0 12697.5 12864.1 14551.8 14238.4 14643.4 True False 13921.881671807201 14091.977520922614 12970.514173034073 13636.176764657846 12908.649784509795 12050.062571988105 13180.710310838602 12607.515433808783 13940.238451247635 13339.38499405945 12842.354632160703 1.0840598994940596 1.0973048108819952 1.009979442597888 1.0618128182279907 1.0051622271964886 0.9383063244345794 1.0263468568163168 0.9817136961968159 1.085489293087853 1.0387024323914906 1.0 13.64862212287436 -5.755682953044023 24.959188069688352 1.0270352210379388 1.0906823814138331 0.3298443548424065 0.03846812454690547 150.4132209264155 652151.7307552907 0.006204882791847949 0.022766228117999228 1.7551613504762946e-06 5.755682953044023 0.06364716037589435 AES(ph)PGPGSR ddPTM_A549_MK2206_60min_R1 1 AESPGPGSR 9 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 AES(1)PGPGSR 80.896 0.0016364 13183000.0 2127.2 2653.7 2511.9 1922.8 2371.8 1516.4 1354.0 2152.0 2160.6 3475.3 3537.7 True False 2486.2193549532085 2788.7619951308607 2868.1251911572244 2393.886086317773 2022.9113619044608 1676.8644414951461 1600.0042735401166 2457.0525902235963 1671.2275497692192 2690.2273162993274 2659.1914544470583 0.9349531229860932 1.0487255404145936 1.0785704001721121 0.9002308135107737 0.760724226351388 0.6305918435059903 0.6016882578591225 0.9239848398709999 0.6284720669413882 1.0116711648574106 1.0 11.376771935659058 -6.5126614919523425 3.9988856751979283 0.793113845667833 1.0217695981010806 0.34082089403533256 0.138438027617471 0.2170253797723459 7.877947239591646 0.02296434761768662 0.052841094884069156 3.071415050397634e-07 6.5126614919523425 0.22865575243324754 AES(ph)PGPGSR ddPTM_A549_PD325901_60min_R1 2 AESPGPGSR 9 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 AES(1)PGPGSR;AES(1)PGPGSR 96.95700000000001 0.00087658 52769000.0 5650.1 5322.9 5529.0 5655.4 6650.1 6422.700000000001 5491.6 5889.0 5791.700000000001 6559.9 6733.6 True False 6223.693992616222 5771.4794637191735 5904.231188577941 6004.721213654704 6183.019917599552 6370.395660639402 5700.585843118828 5771.539275168872 5548.294990179284 6145.706794480462 5905.409887807289 1.0538970386231927 0.9773207234328243 0.9998004034856612 1.016817008088204 1.0470094430473718 1.0787389498216127 0.96531586315264 0.9773308516797767 0.9395275003069086 1.040690978482172 1.0 12.527821483587516 -7.808015284687377 24.999978280196785 0.970835559745722 1.025531850723412 0.23793862617933048 0.03560188895983268 96.02683869358655 51542.784244469694 0.005237456943766274 0.007236602608219809 1.555910871457891e-08 7.808015284687377 0.05469629097768991 AES(ph)PMSR ddPTM_A549_MK2206_60min_R1 1 AESPMSR 7 0 Q6ZUT6 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 AES(0.998)PMS(0.002)R 96.311 0.011784999999999999 4656600.0 972.66 946.02 859.28 937.32 1273.0 938.03 1214.3 1120.8 1535.3 1396.3 1437.9 True False 1136.8212287461404 994.1683772218781 981.1388248965243 1166.9634420778932 1085.7433863329024 1037.2917119860804 1434.9225918462066 1279.6768323060446 1187.557001370305 1080.8748602275343 1080.8297459788628 1.0518041652495125 0.9198195931603464 0.9077644546208778 1.0796921961293937 1.0045461742446675 0.9597179535863423 1.3276120473041353 1.1839763265833272 1.0987456681207304 1.0000417403840332 1.0 10.077923570013501 -6.2743370663635325 23.520226433770986 1.0699983729873912 0.9557984242394871 0.20784655995070278 0.10415655525735863 445.328134919444 812101.8632772297 0.015406053166379345 0.03605152613314316 5.316954375058398e-07 6.2743370663635325 -0.11419994874790407 AES(ph)PMSR ddPTM_A549_PD325901_60min_R1 4 AESPMSR 7 0 Q6ZUT6 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 AES(0.995)PMS(0.005)R;AES(0.999)PMS(0.001)R;AES(0.883)PMS(0.117)R;AES(0.972)PMS(0.028)R 100.98 0.011073000000000001 35437800.0 4736.09 4494.2 4213.78 4570.259999999999 5185.33 5237.63 4341.55 4514.04 4515.92 4972.719999999999 5773.09 True False 5216.89437027482 4872.942006396269 4499.752450317586 4852.554580386452 4821.130309217379 5194.976477810695 4506.770061037317 4424.0039310041275 4326.131586934824 4658.741610550295 5063.036528632737 1.0303884518256936 0.9624544438576661 0.8887458000491132 0.95842772473476 0.9522211190760096 1.0260594503776153 0.8901318478644991 0.8737847151576489 0.8544539551451917 0.9201477382602213 1.0 12.305787177657034 -7.7919988587616045 24.997948906512562 0.9214933166067674 0.9643973745876429 0.25077028468497387 0.05044071565804271 399.0882034483175 326456.5321135979 0.010355128658469217 0.014308576690530591 1.614362799041082e-08 7.7919988587616045 0.04290405798087549 AES(ph)PSPAPPPGLR ddPTM_A549_MK2206_60min_R1 2 AESPSPAPPPGLR 13 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 AES(0.952)PS(0.048)PAPPPGLR;AES(0.997)PS(0.003)PAPPPGLR 178.49 2.6621e-22 168019000.0 13909.4 14078.1 13833.400000000001 12710.099999999999 19938.6 14454.6 13175.400000000001 12558.2 20226.4 19265.2 21463.5 True False 16256.966667819745 14794.61515757312 15795.184131276857 15824.075070578065 17005.658352503717 15984.176177813057 15569.199634860004 14338.36330787452 15645.152694923696 14913.17793973752 16133.52058753553 1.0076515277378197 0.9170109572366478 0.9790289754537479 0.9808197153697168 1.0540574985004814 0.9907432225401657 0.9650218345330337 0.8887312121417619 0.9697296141928787 0.9243598047198188 1.0 13.977773671109638 -5.966181853200973 24.98699193987152 0.9819251233881705 0.9587534246912561 0.0 0.04489942518388922 499.3149632144519 368920.6037596542 0.005790919627628553 0.01800460633939737 1.0809812145831192e-06 5.966181853200973 -0.023171698696914378 AES(ph)TANAGQSDNR ddPTM_A549_MK2206_60min_R1 1 AESTANAGQSDNR 13 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7;A0A1W2PQ15;O75179-5;O75179-3 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 AES(0.978)T(0.017)ANAGQS(0.005)DNR 53.251999999999995 0.018203999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AES(ph)VERLEEAASR ddPTM_A549_MK2206_60min_R1 1 AESVERLEEAASR 13 1 Q15814 Q15814 TBCC Tubulin-specific chaperone C 1 AES(1)VERLEEAASR 50.608000000000004 0.0077837 1451500.0 171.44 137.44 204.82 89.545 353.45 230.78 0.0 169.56 332.82 298.14 169.96 True False 200.3748806944238 144.43510894629588 233.86655585525807 111.48352901982778 301.4579732123839 255.2009864206342 0.0 193.59564925572175 257.4368014043281 230.78996693277722 127.75424134262994 1.5684401440499283 1.1305699711286201 1.8305971950319886 0.8726405311337962 2.3596709592121483 1.9975930641410096 0.0 1.5153755149037185 2.0150939702572894 1.8065151067181484 1.0 6.997227378099307 AESAPLPVSADDT(ph)PEVLNR ddPTM_A549_MK2206_60min_R1 2 AESAPLPVSADDTPEVLNR 19 0 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 AESAPLPVS(0.002)ADDT(0.998)PEVLNR;AESAPLPVS(0.001)ADDT(0.999)PEVLNR 101.96 2.3948000000000005e-09 1844780.0 1410.94 1897.69 1281.51 1415.21 2201.1 1366.1999999999998 1481.8899999999999 1794.44 2049.6 2556.5 2552.7 True False 1649.0721778289221 1994.2743153106535 1463.2473879214508 1761.9365135311914 1877.3211057795381 1510.770377189837 1751.130231105142 2048.8073652420235 1585.3688725386437 1978.9848744336398 1918.7941390640817 0.8594315274661407 1.0393372976860291 0.7625869592426261 0.9182519779795659 0.9783858870317518 0.7873540712015809 0.9126201688104384 1.067757777413974 0.826231871498174 1.0313690427462516 1.0 10.905984222624477 -7.997889766941789 24.999748971288465 0.9299005954012565 0.8931074880750625 0.08164479716104833 0.09704865281721513 246.6245279063927 2921685.003948025 0.015471523456295183 0.02130415173675316 1.0048708152234491e-08 7.997889766941789 -0.03679310732619401 AESCGS(ph)FDETESEESSK ddPTM_A549_MK2206_60min_R1 2 AESCGSFDETESEESSK 17 0 A8MXB7;Q9Y343-2;Q9Y343 A8MXB7 SNX24 Sorting nexin-24 1 AESCGS(0.94)FDET(0.06)ESEESSK;AES(0.001)CGS(0.999)FDETESEESSK 276.22 2.792399999999999e-115 16982600.0 3307.6 4049.3 2903.8 2938.6 4266.9 3916.3 3539.9 2972.79 5268.9 4344.4 5191.5 True False 3865.842016943981 4255.392074041299 3315.6025041133585 3658.557131918768 3639.244662328252 4330.720266570458 4183.0540087922145 3394.1920862875486 4075.50256270436 3362.9970226831606 3902.307271889051 0.9906554629340047 1.0904810353340844 0.8496518272658531 0.9375369177803655 0.932587930362169 1.109784536386346 1.0719437802670158 0.8697910876312076 1.044382791704526 0.8617970826923586 1.0 11.930111666447349 AESCGS(ph)FDETESEESSK ddPTM_A549_PD325901_60min_R1 2 AESCGSFDETESEESSK 17 0 A8MXB7;Q9Y343-2;Q9Y343 A8MXB7 SNX24 Sorting nexin-24 1 AESCGS(1)FDETESEESSK;AESCGS(0.98)FDET(0.02)ESEESSK 227.89 1.0149999999999999e-63 21145800.0 4093.6 4553.4 5424.5 4138.1 3968.5 4413.200000000001 5515.7 4264.9 3329.8999999999996 4477.2 4871.3 True False 4509.179258450957 4937.130998158689 5792.639190168391 4393.701038693027 3689.7662505817666 4377.2603623917985 5725.60298180685 4179.833223750672 3189.955883039174 4194.50882791627 4272.160981714932 1.0554797157107316 1.1556519099560767 1.3559037721099891 1.0284493158142431 0.863676782399857 1.024600987913774 1.340212367069669 0.9783885114911569 0.7466843821411104 0.9818236826442128 1.0 12.060750295719863 -8.517231774786685 24.78153020382143 0.8794396583711203 1.1149574400953588 0.28457312781916455 0.14629351484076303 205.40667450290982 901422.5317711659 0.027064604901513082 0.031167371203044757 3.039262595570437e-09 8.517231774786685 0.23551778172423854 AESEASLLNVS(ph)TPK ddPTM_A549_PD325901_60min_R1 2 AESEASLLNVSTPK 14 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 AESEASLLNVS(0.5)T(0.5)PK;AESEASLLNVS(0.5)T(0.5)PK 116.84 3.4948e-06 15192000.0 5108.68 4717.889999999999 4372.41 5089.290000000001 5723.09 5328.52 5739.57 5791.29 5510.64 5191.9800000000005 6085.719999999999 True False 5627.309432788557 5115.483147736393 4669.148036037271 5403.6438846838 5321.119901988665 5285.126299785178 5957.992477163214 5675.778177770885 5279.046964566806 4864.157496731149 5337.215020557591 1.0543531431867739 0.9584555106048486 0.8748285422365228 1.0124463533641312 0.9969843601003648 0.9902404680021734 1.1163111199782183 1.063434423366725 0.9891014216652813 0.9113662233947208 1.0 12.381871419061829 AESEASLLNVST(ph)PK ddPTM_A549_MK2206_60min_R1 2 AESEASLLNVSTPK 14 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 AESEASLLNVS(0.154)T(0.846)PK;AESEASLLNVS(0.121)T(0.879)PK 76.85 0.00021002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AESEASLLNVST(ph)PK ddPTM_A549_PD325901_60min_R1 2 AESEASLLNVSTPK 14 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 AESEASLLNVS(0.451)T(0.549)PK;AESEASLLNVS(0.189)T(0.811)PK 118.52 3.1005000000000002e-06 16859200.0 6158.24 4871.29 6087.44 6347.5199999999995 6853.09 6720.54 6549.26 7072.55 6177.59 6998.97 7472.21 True False 6783.419991343325 5281.81070409374 6500.57028515046 6739.591894136136 6371.752600277032 6665.810150427934 6798.495673192588 6931.482441941861 5917.967375447907 6557.053839748305 6553.175540241845 1.0351347907114026 0.8059925560759227 0.9919725551729317 1.0284467206394126 0.9723152632108314 1.0171877907885147 1.0374353062029664 1.057728791084094 0.9030686480328138 1.0005918198715484 1.0 12.677978462452163 -4.92992647485474 21.65308255866848 0.9687073685197142 3.221230615227825 0.018677623970821955 0.06869045804177916 2342.547125364368 613582.8277246952 0.00951647154167792 38897.912115193605 1.1750964794706118e-05 4.92992647485474 2.252523246708111 AESGDS(ph)LGSEDRDLLYSIDAYR ddPTM_A549_MK2206_60min_R1 2 AESGDSLGSEDRDLLYSIDAYR 22 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AES(0.174)GDS(0.826)LGSEDRDLLYSIDAYR;AES(0.019)GDS(0.969)LGS(0.011)EDRDLLYSIDAYR 94.72 2.7956999999999996e-07 57081000.0 903.16 1352.63 919.21 1059.28 1787.57 1313.49 1066.23 1318.47 1785.87 1463.25 1573.29 True False 1055.5913278580013 1421.4730894501479 1049.5678000571802 1318.803647552886 1524.6208209796594 1452.4826399759033 1259.9501894953314 1505.3671601450305 1381.373296448373 1132.7008087287397 1182.5986724049549 0.8926031734090576 1.2019911087498631 0.8875097059958299 1.1151743007380028 1.28921235627566 1.2282126420978534 1.065408087202629 1.2729315491989244 1.1680829081595248 0.9578065958972016 1.0 10.20774484729681 -5.245090151038015 23.819792670127534 1.1103946893895238 0.8926028502821723 0.21094949384634698 0.12474970272754479 2060.8804866165824 3002479.6532597565 0.016878481548522405 0.5787409257029332 5.687348603592791e-06 5.245090151038015 -0.21779183910735145 AESGDS(ph)LGSEDRDLLYSIDAYR ddPTM_A549_PD325901_60min_R1 2 AESGDSLGSEDRDLLYSIDAYR 22 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AES(0.001)GDS(0.975)LGS(0.024)EDRDLLYSIDAYR;AESGDS(0.808)LGS(0.192)EDRDLLYSIDAYR 247.69 2.5126999999999994e-110 156509000.0 3801.0 3763.5 3158.8 3227.6000000000004 4416.1 3110.5 3652.4 3625.3 3590.8 3934.7 3818.6 True False 4186.874721851692 4080.663353004398 3373.1751634074876 3426.961521588556 4105.928370717941 3085.169119282989 3791.394080669967 3552.9905475071696 3439.891163343365 3686.2623704998955 3348.936408099817 1.250210279217371 1.218495323809317 1.0072377472588152 1.0232984756891847 1.2260395153479908 0.9212384898743152 1.1321188636189123 1.0609310284046667 1.0271592960151654 1.1007262967383358 1.0 11.709487266084418 -2.0000000000000004 0.40482427721869363 1.0190988890486774 5.076333813732265 0.32160935746118646 0.08428918117103003 40.431079008282204 0.46683048753769224 0.016546934156969617 132.9381346111712 0.00999999999999999 2.0000000000000004 4.057234924683588 AESGDS(ph)LGSEDRDLLYSIDAYRS(ph)QR ddPTM_A549_PD325901_60min_R1 1 AESGDSLGSEDRDLLYSIDAYRSQR 25 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 2 AES(0.465)GDS(0.498)LGS(0.037)EDRDLLY(0.001)S(0.095)IDAY(0.004)RS(0.9)QR 48.388000000000005 0.0031929000000000003 2938400.0 192.93 295.83 249.45 354.65 442.71 405.55 463.69 408.17 341.36 452.7 392.91 True False 212.51611157244068 320.7606323154752 266.37917706470733 376.5559250314109 411.6155768665878 402.24733525967395 481.33597669090386 400.0287291468293 327.0138263113768 424.1164447417346 344.5845608617029 0.6167313794936182 0.9308618805014038 0.7730444347203853 1.0927823466314253 1.1945270439199607 1.167339982539478 1.396858801471623 1.160901487131278 0.9490089326509958 1.2308051285906316 1.0 8.428714252721095 -6.25847749875514 24.709594610870273 1.0542681636833293 0.789277478016935 0.47675156831267385 0.1531344633126794 199.94654085155375 1668046.572297857 0.0235285409176791 0.05942420368191451 5.514707739109329e-07 6.25847749875514 -0.2649906856663943 AESGDSLGS(ph)EDRDLLYSIDAYRS(ph)QR ddPTM_A549_PD325901_60min_R1 1 AESGDSLGSEDRDLLYSIDAYRSQR 25 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 2 AES(0.131)GDS(0.349)LGS(0.507)EDRDLLY(0.006)S(0.037)IDAY(0.055)RS(0.915)QR 43.728 0.015281 3189900.0 554.44 419.9 277.71 431.25 281.11 257.6 406.33 335.43 355.11 424.09 468.11 True False 610.7263406428444 455.28644663917834 296.5570706058924 457.8873330601887 261.36580337685297 255.50219100700772 421.79311050230774 328.7395855102557 340.18596162828953 397.3128850243479 410.5354375937788 1.4876336723144294 1.1090064460882918 0.722366557060375 1.1153417978821702 0.6366461441398688 0.6223633031646464 1.0274219272628744 0.8007581207533676 0.8286396994670666 0.9677919337562413 1.0 8.681362951203258 -5.3923308947404305 2.968312365650123 0.8815901228334346 1.5137955288891065 0.5888974496730839 0.1550490985693868 0.16330656760127815 2.2818218844140925 0.021061762239982292 0.20508688366911032 4.051996907746868e-06 5.3923308947404305 0.6322054060556719 AESGDSLGSEDRDLLYSIDAYRS(ph)QR ddPTM_A549_MK2206_60min_R1 2 AESGDSLGSEDRDLLYSIDAYRSQR 25 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AESGDSLGSEDRDLLYS(0.001)IDAYRS(0.999)QR;AESGDSLGSEDRDLLYSIDAYRS(1)QR 140.46 2.7783e-26 28929000.0 752.54 902.7 720.2 934.21 824.8399999999999 840.29 736.25 842.8699999999999 731.3 1310.04 1066.4499999999998 True False 879.5503541634488 948.6435742565577 822.3351895662378 1163.0914919382803 703.5071286589409 929.2089300606405 870.0170948256363 962.3494036811171 565.6617176461308 1014.1010541377058 801.6210324773339 1.0972146669421605 1.1834065422720568 1.0258403363306083 1.4509243705144017 0.87760562679452 1.1591623627800887 1.0853221903833172 1.2005041842615674 0.705647300567959 1.2650629325477183 1.0 9.646776551417473 -8.749696428482643 24.995946240693645 0.8610001092557729 1.1340734266944144 0.0 0.18969317743358083 163.67883552555853 348405.1177781117 0.026364053414763545 0.02977553426804528 1.7795228605486189e-09 8.749696428482643 0.2730733174386415 AESGDSLGSEDRDLLYSIDAYRS(ph)QR ddPTM_A549_PD325901_60min_R1 3 AESGDSLGSEDRDLLYSIDAYRSQR 25 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AESGDSLGSEDRDLLYSIDAYRS(1)QR;AESGDSLGSEDRDLLYSIDAYRS(1)QR;AESGDSLGSEDRDLLYS(0.003)IDAY(0.001)RS(0.995)QR 237.35 1.2234999999999996e-111 53799600.0 4809.2 4340.1 4685.1 4541.1 5380.9 5524.5 5052.6 5000.099999999999 5445.4 5906.0 5853.3 True False 5297.426443654082 4705.855458582277 5003.059059794991 4821.59343341362 5002.964147097251 5479.510303642138 5244.879457888806 4900.369082997433 5216.548774888591 5533.094152075737 5133.381207125815 1.0319565662297883 0.9167165399775734 0.9746128054643751 0.9392626884441404 0.9745943161502348 1.0674271172450331 1.0217202358960245 0.9546084510916644 1.0162013231449338 1.0778654319291672 1.0 12.32569368435125 -7.017772634017614 24.533777883657475 1.0088248277323297 0.9620520034498558 0.2749082895166307 0.041623757914550884 561.1487444361287 774624.1575248904 0.004920419454491747 0.008640335101475627 9.599030375703903e-08 7.017772634017614 -0.04677282428247398 AESPESSAIESTQST(ph)PQK ddPTM_A549_MK2206_60min_R1 1 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 AESPESSAIESTQS(0.151)T(0.849)PQK 139.58 1.6771e-13 3991500.0 889.72 859.92 1146.6 793.87 1493.1 1069.2 962.55 1189.2 1982.9 1822.6 1678.8 True False 1039.8829844344536 903.6862549847123 1309.2051212949852 988.3681856381792 1273.4669678976093 1182.34203432248 1137.4328755509887 1357.7727417722595 1533.77631604063 1410.8733941493251 1261.9076274770948 0.8240563427875222 0.7161271041616835 1.0374809477239244 0.7832333873868429 1.0091602112300604 0.936948163699043 0.9013598545442143 1.0759684086281542 1.2154426224580928 1.1180480753334177 1.0 10.301390592559292 -8.274447556478092 4.114527188454681 1.1037196341149842 0.8874357168508884 0.5252470375350271 0.09888601374717479 0.15122268025264565 6.138528326503185 0.018533882050684337 0.023196572339143448 5.31560184538386e-09 8.274447556478092 -0.2162839172640958 AESPESSAIESTQST(ph)PQKGR ddPTM_A549_MK2206_60min_R1 1 AESPESSAIESTQSTPQKGR 20 1 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 AESPESSAIES(0.003)T(0.003)QS(0.376)T(0.618)PQKGR 88.09 1.908e-06 3728500.0 1266.1 1883.6 1747.0 1911.2 2136.6 1659.6 1276.7 1624.2 2979.9 2683.7 2227.2 True False 1479.786726826936 1979.4671944939112 1994.7508694421244 2379.4440857970276 1822.3089703369048 1835.2177704466778 1508.6598641275243 1854.4353239038887 2304.9574079224726 2077.450306089402 1674.1247724070677 0.8839166298813492 1.1823892861031022 1.191518638466868 1.4213062998738422 1.0885144287762836 1.0962252041751879 0.9011633356087092 1.1077043685564543 1.3768133928323572 1.2409172484213529 1.0 10.70919134052211 -11.29062145091562 1.8481516537830747 0.999487341950082 1.1809488703314321 0.0 0.17534083245516194 0.621243547612452 3.832615301817018 0.1326914159417836 0.02633259308972253 5.121280330859364e-12 11.29062145091562 0.1814615283813501 AESSAGDGPVPYSQGSSSLIMPRPNS(ph)VAATSSTK ddPTM_A549_MK2206_60min_R1 2 AESSAGDGPVPYSQGSSSLIMPRPNSVAATSSTK 34 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 AESSAGDGPVPY(0.053)S(0.111)QGS(0.111)S(0.111)S(0.111)LIMPRPNS(0.415)VAAT(0.021)S(0.022)S(0.022)T(0.024)K;AESSAGDGPVPYS(0.001)QGS(0.005)S(0.005)S(0.005)LIMPRPNS(0.981)VAAT(0.001)S(0.001)STK 108.51 7.632500000000001e-15 6944000.0 929.1600000000001 1232.41 1292.46 1443.79 1343.5500000000002 935.42 1270.72 1396.31 1899.5300000000002 1626.48 1584.85 True False 1085.9794922190324 1295.1344049512852 1475.7502625753675 1797.5186148141966 1145.9155747899238 1034.4055235184571 1501.5933755338974 1594.2412185200342 1469.2894879260969 1259.0570383605816 1191.2880053651863 0.91160113031284 1.087171531248873 1.2387854623978858 1.508886689632346 0.9619131306863501 0.8683085188970426 1.2604788840072203 1.338250038059708 1.233362110009401 1.0568871949437793 1.0 10.21830652547286 -10.924163342758677 1.241393232515072 1.0020141719631879 1.1675379306584022 0.06299558266765404 0.1833995171764383 0.9147928567474686 2.553017143031903 0.12458159218392524 0.030948250149570984 1.1907940535250871e-11 10.924163342758677 0.1655237586952143 AESSAGDGPVPYSQGSSSLIMPRPNS(ph)VAATSSTK ddPTM_A549_PD325901_60min_R1 2 AESSAGDGPVPYSQGSSSLIMPRPNSVAATSSTK 34 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 AESSAGDGPVPY(0.001)S(0.048)QGS(0.048)S(0.048)S(0.048)LIMPRPNS(0.804)VAAT(0.002)SSTK;AESSAGDGPVPYS(0.002)QGS(0.002)S(0.002)S(0.002)LIMPRPNS(0.972)VAAT(0.008)S(0.01)S(0.002)T(0.002)K 114.45 2.8899999999999997e-21 12287000.0 3037.1000000000004 3111.0 3195.7 3004.85 3896.8 3107.68 3502.8999999999996 3735.7 3751.9 4051.4399999999996 3858.1000000000004 True False 3345.424156205151 3373.1748880554496 3412.579419305212 3190.45275999051 3623.1022112301944 3082.3720844280215 3636.2047763604296 3661.1885329000434 3594.2206905837065 3795.631386976925 3383.578158510946 0.9887237709553646 0.9969253642244591 1.0085711809911402 0.9429227316547559 1.0707901639915594 0.9109800158375888 1.0746625631253808 1.0820463903547801 1.062254371616307 1.1217803192840434 1.0 11.724333998935533 -7.808460452279904 24.999997047786948 1.0380170691716424 0.9898150652681346 0.3289611119037713 0.0501859447720362 142.63746416206516 75836.3957641201 0.006962814654873136 0.009620523389661729 1.554316823511572e-08 7.808460452279904 -0.04820200390350782 AESSDS(ph)GAES(ph)EEEEAQEEVKGAEQSDNDKK ddPTM_A549_PD325901_60min_R1 1 AESSDSGAESEEEEAQEEVKGAEQSDNDKK 30 2 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3;Q5T8D3;X6RDD7;Q5T8E0 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 2 AES(0.002)S(0.012)DS(0.986)GAES(1)EEEEAQEEVKGAEQSDNDKK 162.86 1.0659999999999999e-46 37325000.0 3822.3 3268.2 3864.2 3808.1 4665.1 4802.0 4409.0 4781.7 5150.7 5798.1 4683.6 True False 4210.3370821714625 3543.622683748896 4126.447849322274 4043.3176881774007 4337.4394697213065 4762.894104098026 4576.786907697377 4686.325242328918 4934.23399104174 5432.006976490061 4107.546891786598 1.025024715016742 0.862710220261802 1.004601519601266 0.9843631234648521 1.0559683392524133 1.1595471042879273 1.1142385049453885 1.1409060847727965 1.201260538475696 1.3224455178714667 1.0 12.004061329749021 -6.793830465088024 2.293556289144575 1.1068610306926514 0.9575114878228097 0.445483090602411 0.08888740809141542 0.23326719884899608 2.50277746304827 0.012131997508384194 0.026710383381846097 1.607568674812426e-07 6.793830465088024 -0.1493495428698417 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPK ddPTM_A549_MK2206_60min_R1 6 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPK 32 1 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7 Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.004)PGDGS(0.996)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.016)PGDGS(0.984)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.006)PGDGS(0.994)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.012)PGDGS(0.988)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.087)PGDGS(0.913)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.04)PGDGS(0.96)PPKPK 226.6 2.2562999999999997e-115 197588900.0 8169.51 8360.289999999999 8191.42 7575.280000000001 12103.28 9181.05 7207.4 8242.69 12152.46 12199.36 12658.3 True False 9548.323562656919 8785.793051314235 9353.086529459422 9431.22394006724 10322.903545118068 10152.582617112246 8516.891285903273 9411.11654967944 9399.947213490901 9443.516103176518 9514.89475869271 1.0035133130541112 0.9233725936156703 0.9829942176622121 0.9912063327291111 1.0849204123552885 1.0670199591894542 0.8951114543986237 0.9890930786261762 0.987919199516443 0.992498219126283 1.0 13.215971984046114 -5.992964964817304 24.58333391825797 0.9978438768584289 0.9608780616753165 0.07891343698286446 0.04898829769952297 282.4686890029585 987035.0068328213 0.006623752772839689 0.02052556830432866 1.0163306784732623e-06 5.992964964817304 -0.03696581518311237 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPK ddPTM_A549_PD325901_60min_R1 4 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPK 32 1 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7 Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.002)PGDGS(0.998)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.01)PGDGS(0.99)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.036)PGDGS(0.964)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.004)PGDGS(0.996)PPKPK 202.58 8.731399999999998e-89 387787700.0 6404.2 6957.2 7319.2 6384.2 8865.4 6959.0 7875.2 7505.6 7907.599999999999 8111.300000000001 8705.0 True False 7054.349669477135 7543.50766029552 7815.924925925056 6778.537534429817 8242.72488796966 6902.3282112491 8174.895045474791 7355.894919970709 7575.271071419736 7599.15113371688 7634.340185541535 0.9240287304510181 0.9881021118998548 1.0237852566129315 0.8879009016741881 1.0796905413751836 0.9041158821192207 1.0708057077358168 0.9635272651200211 0.992262708670794 0.9953906885245567 1.0 12.898287759014739 -5.267300649891855 5.266508181914332 0.9929862739864024 0.9213756641402504 0.10383968672707122 0.05591398844095279 0.22020355208337128 21.144571890501908 0.006343074799339427 0.05652867317088354 5.403801034367736e-06 5.267300649891855 -0.07161060984615197 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPKDPVSAAVPAPGR ddPTM_A549_MK2206_60min_R1 2 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPKDPVSAAVPAPGR 44 2 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7 Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.079)PGDGS(0.888)PPKPKDPVS(0.033)AAVPAPGR;AESSSGGGTVPSSAGILEQGPS(0.194)PGDGS(0.805)PPKPKDPVS(0.001)AAVPAPGR 121.32 8.3544e-23 117699000.0 258.84 831.82 1017.0999999999999 749.38 1542.0 904.11 1114.47 1060.3 1221.0 1383.05 954.8499999999999 True False 302.5258639695793 874.1560850095166 1161.3400740180793 932.9781336409461 1315.173842675049 999.7823201003533 1316.9547730666573 1210.6007720325658 944.4454495363406 1070.6180444300592 717.7343924806435 0.4215011390550552 1.2179381316648994 1.6180638495032122 1.2998933079079216 1.832396296531823 1.392969781822621 1.8348776188848637 1.6866974534248955 1.3158704103228707 1.4916632888801307 1.0 9.487306243370755 -9.870128930366997 1.0861074884413955 1.0502046249708337 1.4293482467841243 0.0 0.3952547586280579 0.622373142420538 1.4930261001060041 0.11861682831156412 0.07138861666421613 1.3485624711821334e-10 9.870128930366997 0.37914362181329064 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPKDPVSAAVPAPGR ddPTM_A549_PD325901_60min_R1 2 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPKDPVSAAVPAPGR 44 2 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7 Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.004)PGDGS(0.995)PPKPKDPVS(0.001)AAVPAPGR;AESSSGGGTVPSSAGILEQGPS(0.003)PGDGS(0.997)PPKPKDPVSAAVPAPGR 160.82 3.793e-53 180261000.0 1132.13 1527.65 1489.25 1580.0500000000002 1532.51 2369.1000000000004 1827.98 1887.2200000000003 2019.58 2081.21 1911.35 True False 1247.0630041699437 1656.390426788141 1590.3194605877545 1677.6460999460912 1424.8717844724877 2349.8068350726026 1897.5447792090367 1849.5779166045506 1934.7040758786313 1949.8020454184787 1676.266067045928 0.7439529014434052 0.9881429084269339 0.948727348153246 1.0008232779552684 0.8500272197143078 1.4018101787466537 1.1320069149601453 1.1033916112518158 1.1541748138397545 1.1631817190302023 1.0 10.71103544512078 AET(ph)EEAEEPEEDGEEHVCVSASK ddPTM_A549_MK2206_60min_R1 2 AETEEAEEPEEDGEEHVCVSASK 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AET(1)EEAEEPEEDGEEHVCVSASK;AET(1)EEAEEPEEDGEEHVCVSASK 157.43 6.4334e-33 11798100.0 1054.17 1370.52 966.39 1062.28 2054.3 1590.62 915.5799999999999 1475.2 2776.3999999999996 1511.94 1385.82 True False 1232.0881240179706 1440.27361403578 1103.4386334975243 1322.538647687561 1752.1151913147548 1758.938352631897 1081.9290345405166 1684.314117610525 2147.549832999751 1170.3917039120654 1041.6826473137403 1.182786453432091 1.382641457789389 1.0592848372227746 1.269617624041337 1.6820047793184003 1.6885549136944866 1.0386359390074917 1.6169167471052563 2.061616211557126 1.1235587987668183 1.0 10.024700106538154 -6.618123781072107 7.2697263579682705 1.509912030252633 1.2158575894639274 0.10521779524198649 0.3107691357521004 0.4221404228920678 27.820240388520137 0.05797422266877334 0.12115319561011613 2.4092186638673164e-07 6.618123781072107 -0.2940544407887056 AET(ph)EEAEEPEEDGEEHVCVSASK ddPTM_A549_PD325901_60min_R1 2 AETEEAEEPEEDGEEHVCVSASK 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AET(1)EEAEEPEEDGEEHVCVSASK;AET(1)EEAEEPEEDGEEHVCVSASK 173.59 1.4755999999999998e-40 12578400.0 1023.85 1248.83 1212.1 1138.9499999999998 1171.6100000000001 942.43 1034.3200000000002 1042.91 889.5899999999999 1062.67 1247.04 True False 1127.7904982814664 1354.073286869266 1294.360394949415 1209.3003547568735 1089.3201554350771 934.7551625416706 1073.6816136016212 1022.1083419029321 852.2036259325569 995.5728348436036 1093.6619856378766 1.0312057226929072 1.2381094932905663 1.1835104556500438 1.1057350174346154 0.9960300072053185 0.8547020695763474 0.981730761150483 0.9345742609009027 0.7792203049240214 0.9103112734259821 1.0 10.094951202870588 -6.841748631490873 2.27578899147309 0.9010773699810661 1.158190640626199 0.6817810933960853 0.0731632291869036 0.15353707742124187 1.618661167566743 0.01376542455610335 0.029667721732065618 1.4396315921559908e-07 6.841748631490873 0.2571132706451329 AET(ph)LELSDLYVSDK ddPTM_A549_MK2206_60min_R1 2 AETLELSDLYVSDK 14 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 AET(0.974)LELS(0.023)DLY(0.003)VS(0.001)DK;AET(1)LELSDLYVSDK 166.38 5.8892e-20 4164500.0 1296.06 2553.4 1546.04 1180.1100000000001 2798.9 2022.3 1452.28 2045.1 2765.8 2666.9 2989.0 True False 1514.8032423752613 2683.3571535468 1765.29171962925 1469.2370029771514 2387.1855176804115 2236.2984437059035 1716.1404773831916 2334.9991878560772 2139.3507160750296 2064.4454377575094 2246.7488077966623 0.6742201162491307 1.1943289540134707 0.7857094275529775 0.6539391488174418 1.0625066359872568 0.9953486726889567 0.763832819863015 1.039279148498118 0.9521984427680833 0.9188590333701194 1.0 11.13362312123884 -8.123423596611897 0.43376451776135055 0.993335393922708 0.8672323360222387 0.05491000201763707 0.1594583790800928 2.102087395760597 0.9175309179243498 0.058026468563036594 0.09304117024533286 7.526211236264063e-09 8.123423596611897 -0.12610305790046927 AET(ph)LELSDLYVSDK ddPTM_A549_PD325901_60min_R1 2 AETLELSDLYVSDK 14 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 AET(1)LELSDLYVSDK;AET(0.998)LELS(0.002)DLYVSDK 202.89 1.4434e-31 9641400.0 2932.3 3239.9 3399.6 3542.4 4947.7 2846.7 3656.6 4172.9 3392.8 3755.8 5188.0 True False 3229.9849373548336 3512.937743430041 3630.3172994555175 3761.206002625886 4600.19062063838 2823.517419020375 3795.7539139682963 4089.6682359232796 3250.2124147798195 3518.658147031162 4549.908889441638 0.7099010146884974 0.7720896898797344 0.7978879110920016 0.826655235087017 1.0110511512249012 0.6205657052985242 0.8342483346812927 0.8988461824837026 0.7143467031443531 0.7733469466161046 1.0 12.151621940727974 -10.951676012967646 1.1554814206087602 1.0025008814639158 0.7953168681453572 0.0 0.11757366079323735 0.42513677311533526 0.9885589690334806 0.07173252144151707 0.01588754867875864 1.1176967472354179e-11 10.951676012967646 -0.20718401331855862 AET(ph)PTESVS(ph)EPEVATK ddPTM_A549_MK2206_60min_R1 2 AETPTESVSEPEVATK 16 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 2 AET(0.931)PT(0.069)ES(0.033)VS(0.967)EPEVATK;AET(0.807)PT(0.172)ES(0.193)VS(0.827)EPEVATK 112.8 4.183e-07 4410700.0 1084.01 1551.17 1300.6 968.9300000000001 1705.95 1245.15 1100.1399999999999 1511.13 1890.7600000000002 1157.2 1756.35 True False 1266.9643865000144 1630.1179274172428 1485.044636975631 1206.3178934969208 1455.0070148583002 1376.910946536324 1300.0211975571813 1725.3373051415363 1462.5058789232855 895.7877162896955 1320.1998222059774 0.9596762286961911 1.2347509066418523 1.124863533532528 0.9137388698335328 1.1021112034593883 1.042956470207355 0.9847154769229716 1.3068758805455658 1.1077913012285694 0.6785243424687681 1.0 10.366540593554646 -10.72614102482828 1.166061058249913 1.0034965123143549 1.0895435909394442 0.1556608793716452 0.1472570528429533 0.9403165079423913 2.40166284401842 0.05909254849106321 0.018003111894127285 1.8787066609838257e-11 10.72614102482828 0.08604707862508931 AET(ph)PTESVS(ph)EPEVATK ddPTM_A549_PD325901_60min_R1 2 AETPTESVSEPEVATK 16 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 2 AET(0.964)PT(0.115)ES(0.262)VS(0.66)EPEVATK;AET(0.865)PT(0.045)ES(0.146)VS(0.943)EPEVATK 99.45100000000001 3.13e-06 4816700.0 1820.58 2050.5299999999997 2132.22 2288.7 2618.8 1867.63 2019.9299999999998 1687.73 2108.7 2268.36 2075.52 True False 2005.4039413598393 2223.3353594356604 2276.9252712804587 2430.0678009851677 2434.8645223695426 1852.4206404907538 2096.799541498107 1654.0669011514278 2020.0786722017815 2125.1353624792614 1820.2441978053034 1.1017224742580067 1.2214489474084687 1.2508900036741128 1.3350229622570082 1.3376581698792374 1.017676992309189 1.1519330999797996 0.9087060423792378 1.1097844314721188 1.1675001436848802 1.0 10.829916295157357 -7.271056784100699 24.970649314799065 1.0473272326416703 1.2526438665198265 0.5220375043480914 0.09014477288984629 357.9613869391539 929410.2887007069 0.012690742051339085 0.020445993791649082 5.357266065601555e-08 7.271056784100699 0.20531663387815624 AET(ph)PTESVSEPEVATK ddPTM_A549_MK2206_60min_R1 3 AETPTESVSEPEVATK 16 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 AET(0.932)PT(0.068)ESVSEPEVATK;AET(1)PTESVSEPEVATK;AET(0.937)PT(0.061)ES(0.001)VSEPEVATK 366.87 2.1922999999999991e-237 154205300.0 24319.75 27283.47 24473.789999999997 24397.3 43094.6 33397.4 31860.26 34001.62 49008.4 39240.11 40455.4 True False 28424.329239198618 28672.082085877453 27944.54143162218 30374.6395952364 36755.44142707142 36931.49070060009 37648.85683611464 38821.453760594086 37908.07565033315 30375.74189756 30409.207667760835 0.9347277163466992 0.9428750133557395 0.9189500014907774 0.9988632366583795 1.2086944792724317 1.2144838202987456 1.2380742453881532 1.2766348332630753 1.2465985981779608 0.9988994856240101 1.0 14.892220606023912 -6.612553203409113 4.585248617911058 1.1532439172382603 0.9365692036405286 0.5913731310477702 0.08844410593816916 0.15192118553117473 5.697414795959614 0.016035479795848722 0.034323700611161204 2.4403200973967505e-07 6.612553203409113 -0.2166747135977316 AET(ph)PTESVSEPEVATKQELQEEEEQTKPPR ddPTM_A549_MK2206_60min_R1 2 AETPTESVSEPEVATKQELQEEEEQTKPPR 30 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 AET(0.998)PT(0.002)ESVSEPEVATKQELQEEEEQTKPPR;AET(0.857)PT(0.143)ESVSEPEVATKQELQEEEEQTKPPR 298.81 9.689799999999996e-186 80303000.0 7044.0 8025.5 7610.6 6554.2 10991.0 8234.4 6758.2 5726.2 12479.4 11249.1 12638.400000000001 True False 8232.854990734491 8433.963670317939 8689.897519734528 8159.979294229214 9374.238459689657 9105.758742447653 7986.0774604422595 6537.9063857520305 9652.835825506798 8707.920497160747 9499.936477904765 0.8666221095143858 0.8877915857578524 0.9147321710988017 0.8589509322728565 0.9867685411889374 0.9585073293517381 0.8406453536838395 0.6882052738939979 1.0160947757869383 0.9166293393028351 1.0 13.213702151440602 AETEEGPDVLR ddPTM_A549_PD325901_60min_R1 1 AETEEGPDVLR 11 0 F5H365;Q15436-2;Q15436 F5H365 SEC23A Protein transport protein Sec23A 0 80.23899999999999 0.0024714000000000003 563410.0 632.73 516.06 560.86 597.86 674.51 407.27 590.87 526.39 672.12 403.94 572.54 False True 696.9642838087926 559.5501873127274 598.9233323251624 634.7884543614252 627.134744533176 403.95332814993793 613.3558811864706 515.8907385050338 643.87313376026 378.4351594631683 502.1212096300919 1.3880399203256915 1.1143727382576467 1.192786364803 1.264213584662293 1.2489708311568444 0.8044936569150836 1.2215295220019171 1.0274227190782994 1.2823061870551045 0.7536729224044489 1.0 8.971891855592872 -11.073145324230863 1.3857136736018565 0.9998608823641226 1.1768526733385671 0.26264343292264825 0.16536041804768353 0.6299952922687163 2.1566039141849487 0.10330367405808853 0.022709562236398636 8.449960440815641e-12 11.073145324230863 0.1769917909744445 AETEKQS(ph)PPHGEAK ddPTM_A549_PD325901_60min_R1 2 AETEKQSPPHGEAK 14 1 Q9Y6D6;E5RJN9 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 1 AET(0.002)EKQS(0.998)PPHGEAK;AET(0.003)EKQS(0.997)PPHGEAK 117.26 1.4134e-06 44041000.0 7162.1 6974.0 7462.9 7878.1 8237.1 6394.1 7608.3 7670.6 7789.2 8796.5 8862.7 True False 7889.191119540645 7561.723455255125 7969.377272063351 8364.712344536747 7658.55451245233 6342.028569557096 7897.8380199215135 7517.603865530713 7461.8470116726485 8241.087488779916 7772.644085284201 1.0149945157629308 0.9728637220854603 1.0253109732827752 1.076173339825697 0.9853216522485734 0.8159422327807776 1.0161069943848762 0.967187456809408 0.9600139836326768 1.06026821739884 1.0 12.924189740416045 -6.9863610132065865 24.926332166612273 0.9692504009157729 1.0204810915042852 0.14040451037734336 0.06063358905410059 330.7653361771054 604495.9713164148 0.007903855256770332 0.014931808461469314 1.0319032654883431e-07 6.9863610132065865 0.05123069058851237 AETNSRVS(ph)GVDGYETEGIR ddPTM_A549_MK2206_60min_R1 4 AETNSRVSGVDGYETEGIR 19 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 AETNS(0.001)RVS(0.998)GVDGYETEGIR;AET(0.001)NS(0.005)RVS(0.994)GVDGYETEGIR;AETNS(0.001)RVS(0.999)GVDGYETEGIR;AET(0.004)NS(0.003)RVS(0.993)GVDGYETEGIR 177.49 4.1161e-35 53863400.0 4861.33 6373.299999999999 4779.91 4562.9 7161.1 5361.599999999999 5147.44 5106.02 8534.4 8098.0 7677.6 True False 5681.803655892575 6697.673747434716 5457.773112968004 5680.810704836366 6107.711676251809 5928.9609532579625 6082.6632184574155 5829.813971530437 6601.372026636316 6268.65617569474 5771.040029019628 0.9845372111996575 1.1605661568375056 0.9457174245064385 0.9843651536413638 1.0583381237245333 1.0273643785945394 1.0539977522025135 1.0101842895241178 1.143879091713343 1.0862264243832749 1.0 12.494615622510214 AETNSRVS(ph)GVDGYETEGIR ddPTM_A549_PD325901_60min_R1 3 AETNSRVSGVDGYETEGIR 19 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 AETNSRVS(1)GVDGYETEGIR;AETNSRVS(1)GVDGYETEGIR;AET(0.002)NS(0.047)RVS(0.951)GVDGYETEGIR 198.67 4.3608e-55 52014000.0 11813.0 11086.599999999999 11497.7 11563.2 12538.8 11786.9 11820.3 11479.0 11489.099999999999 12827.699999999999 14059.8 True False 13012.24706372903 12020.906690426089 12278.003063286766 12277.43260206742 11658.117944511696 11690.911394334242 12270.127984816349 11250.042339898706 11006.253081421482 12017.756832811014 12330.53373241549 1.0552866036545845 0.9748894047323006 0.9957397895120609 0.9956935253979742 0.9454674223763653 0.948126954439956 0.995101124662565 0.9123726988657188 0.8926015142789292 0.9746339528854113 1.0 13.58994762831239 -3.4732831702643248 0.5092727142446654 0.9485721519027592 1.6187540826033668 0.40983246954981933 0.03318642453741196 19.173878164306824 0.7952891855853984 0.00804259290331493 11.507183551602948 0.00033629222739653435 3.4732831702643248 0.6701819307006076 AETPTESVS(ph)EPEVATK ddPTM_A549_PD325901_60min_R1 2 AETPTESVSEPEVATK 16 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 AETPTES(0.006)VS(0.994)EPEVATK;AETPT(0.003)ES(0.018)VS(0.978)EPEVATK 270.07 1.3857999999999998e-91 216310000.0 25738.0 29429.0 27739.0 30607.0 35676.0 29537.0 28833.0 29045.0 33942.0 30558.0 36053.0 True False 28350.902812685843 31909.085111084492 29621.53534815761 32497.52487645961 33170.24083551848 29296.460464961136 29930.255593023016 28465.674689638287 32515.5357764845 28628.562664939098 31618.709558797094 0.8966495852705644 1.0091836623423047 0.9368356824643458 1.0277941551039045 1.0490700379101876 0.926554589790656 0.9465995295401197 0.9002794575377743 1.0283637830323118 0.905431090149406 1.0 14.948490868336368 AETPTESVS(ph)EPEVATKQELQEEEEQTKPPR ddPTM_A549_MK2206_60min_R1 2 AETPTESVSEPEVATKQELQEEEEQTKPPR 30 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 AETPTES(0.004)VS(0.996)EPEVATKQELQEEEEQTKPPR;AETPTES(0.012)VS(0.988)EPEVATKQELQEEEEQTKPPR 174.6 3.821699999999999e-58 47070000.0 2829.61 3362.9 2683.93 3322.6000000000004 4006.8999999999996 3028.4 2751.48 3020.06 4883.8 5131.4 5067.8 True False 3307.1789906774884 3534.0572458927427 3064.551631952949 4136.63714915718 3417.4903179083353 3348.8632779107757 3251.388300265997 3448.162753545854 3777.627097826026 3972.2131760879224 3809.325395835374 0.8681797029713272 0.9277383469935191 0.8044867039458837 1.085923810467766 0.8971379346181818 0.8791223983049575 0.8535338839314295 0.9051898683466714 0.9916787633726426 1.0427602694247724 1.0 11.89531981407218 -8.767101076714527 6.26754745259742 0.9962676852770864 0.903561651319804 0.33368720828336196 0.06757379330830743 0.13743467663853648 21.38650484653804 0.010919013675448657 0.011917803279007277 1.709617376306609e-09 8.767101076714527 -0.09270603395728239 AETSEGSGSAPAVPEAS(ph)ASPK ddPTM_A549_PD325901_60min_R1 2 AETSEGSGSAPAVPEASASPK 21 0 P51608;P51608-2;I6LM39;A0A087X1U4;A0A087WVW7;A0A0D9SFX7;B5MCB4 P51608 MECP2 Methyl-CpG-binding protein 2 1 AETSEGSGSAPAVPEAS(0.873)AS(0.127)PK;AETSEGSGSAPAVPEAS(0.527)AS(0.473)PK 332.26 1.2283999999999994e-206 129692000.0 12308.400000000001 11072.3 11499.099999999999 11582.8 13588.3 11037.5 11791.9 12288.900000000001 11902.599999999999 11972.0 12825.6 True False 13557.93970703483 12005.401579240226 12279.498075705647 12298.24324955259 12633.904685090136 10947.614259471462 12240.64720727527 12043.788249044454 11402.375114406464 11216.085876845702 11248.13250817708 1.2053502834518162 1.0673239820488096 1.091692160167814 1.0933586744832628 1.1232002002026238 0.973282831751213 1.0882381762818547 1.0707366969840508 1.0137127301903008 0.9971509376060355 1.0 13.457397874784121 -2.0000000000042064 0.1769678107578064 0.9872604780022134 1.7024240911103132 0.5641351576413507 0.04224718955362928 26.847538789225002 0.2791450232962488 0.04422538542912044 5.195078036270623 0.009999999999903144 2.0000000000042064 0.7151636131080998 AETSEGSGSAPAVPEASAS(ph)PK ddPTM_A549_MK2206_60min_R1 4 AETSEGSGSAPAVPEASASPK 21 0 P51608;P51608-2;I6LM39;A0A087X1U4;A0A087WVW7;A0A0D9SFX7;B5MCB4 P51608 MECP2 Methyl-CpG-binding protein 2 1 AETSEGSGSAPAVPEASAS(1)PK;AETSEGSGSAPAVPEAS(0.045)AS(0.955)PK;AETSEGSGSAPAVPEAS(0.009)AS(0.991)PK;AETSEGSGSAPAVPEAS(0.006)AS(0.994)PK 318.9 3.571699999999999e-184 172454000.0 7840.5 8901.3 8437.1 7247.2 10354.8 8507.8 8427.5 7993.4 11760.1 11119.2 11086.0 True False 9163.784718179133 9354.338149473686 9633.60764772189 9022.764325339173 8831.62263692061 9408.089748979424 9958.667662673062 9126.488928760826 9096.456127020734 8607.36499738022 8333.040241965144 1.0996928434391047 1.1225600594564864 1.1560735779490294 1.0827698010985933 1.0598319917434946 1.129010478264624 1.195082151712321 1.0952171912959066 1.091613128328726 1.032920128482469 1.0 13.02462723184772 -10.088641860149902 0.6512426042179058 1.0005074062897859 1.1185856303610937 0.5284468128552567 0.03581732214310249 0.3947534921734076 0.3245861767022139 0.02292663457454588 0.008194988250351264 8.153764049489622e-11 10.088641860149902 0.11807822407130786 AETSEGSGSAPAVPEASAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AETSEGSGSAPAVPEASASPK 21 0 P51608;P51608-2;I6LM39;A0A087X1U4;A0A087WVW7;A0A0D9SFX7;B5MCB4 P51608 MECP2 Methyl-CpG-binding protein 2 1 AETSEGSGSAPAVPEAS(0.033)AS(0.967)PK;AETSEGSGSAPAVPEAS(0.006)AS(0.994)PK 273.79 1.1311999999999997e-112 110492000.0 9196.3 8803.3 9280.8 9402.7 10659.7 8461.2 8916.6 8788.3 8826.7 9258.4 9803.2 True False 10129.901606041756 9545.184986184031 9910.650897984102 9983.483423918922 9910.999445968619 8392.29479250192 9255.926092350743 8613.010462212018 8455.74449467608 8673.823043951568 8597.468547604907 1.1782423570323797 1.1102320332236795 1.1527405820804104 1.161211974040909 1.1527811228491944 0.9761355620009631 1.0765873746556793 1.0018077314875948 0.9835156066993338 1.0088810439868294 1.0 13.069696217566241 -7.256937963202651 24.96978849886012 0.9988597498664875 1.1494338285289638 0.8546300463297848 0.029281408829823174 97.7045085255728 541974.9128608502 0.004318228615205993 0.0073245271650801995 5.534291581604792e-08 7.256937963202651 0.1505740786624763 AEVDNRS(ph)PQK ddPTM_A549_MK2206_60min_R1 2 AEVDNRSPQK 10 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 AEVDNRS(1)PQK;AEVDNRS(1)PQK 79.875 0.00034272 81781000.0 10152.7 10118.3 8804.1 8361.2 11661.900000000001 8234.3 7790.9 8812.6 11481.599999999999 12694.2 13170.8 True False 11866.227550316593 10633.278251246404 10052.65376625953 10409.694375348534 9946.449958425517 9105.648160514034 9206.405682956942 10061.813037455613 8881.035932347624 9826.57140349521 9900.12686441228 1.1985934839857257 1.0740547466588093 1.0154065603336393 1.0514708061740081 1.0046790404454062 0.9197506542310951 0.9299280513314392 1.0163317273867007 0.8970628411108595 0.9925702506720923 1.0 13.273231297277139 -3.381087581804029 0.5010888048384677 0.9526146121414908 2.7380880843313213 0.7381875787574181 0.04058185995298777 8.980004185393858 0.3394421259152747 0.008750956444387012 14.303395155870016 0.00041582674452194664 3.381087581804029 1.7854734721898304 AEVDNRS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 AEVDNRSPQK 10 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 AEVDNRS(1)PQK;AEVDNRS(1)PQK 64.104 0.0017329999999999997 117970000.0 16517.4 15915.6 14470.8 14688.1 15391.0 13762.2 14206.9 15147.9 14877.400000000001 17359.1 17000.3 True False 18194.234288532785 17256.863467803058 15452.875507989433 15595.350577904606 14309.989256067536 13650.125206042867 14747.551353813973 14845.76325120234 14252.154615552121 16263.043463477463 14909.370873780776 1.220322067413903 1.1574508149200662 1.0364538945881647 1.0460099698324747 0.9597983293334466 0.9155399863348772 0.9891464555186984 0.9957337151837644 0.9559192494577744 1.0907934077941022 1.0 13.863931761488313 -5.671831635567282 1.1349549267392027 0.9758269473133544 1.2633442472431644 0.7394979164448388 0.0444937749758013 0.20812935343619157 0.33662492828345103 0.00446348446509047 0.059502450878362645 2.128964228892908e-06 5.671831635567282 0.28751729992981 AEVGEKT(ph)EER ddPTM_A549_MK2206_60min_R1 1 AEVGEKTEER 10 1 P42167;G5E972;H0YJH7 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 AEVGEKT(1)EER 57.106 0.005485899999999999 6549600.0 2187.9 2502.2 2518.7 2499.9 2470.5 1865.7 1494.3 1987.1 2870.8 3311.1 3656.4 True False 2557.1640309806917 2629.5512922396797 2875.889533408057 3112.3756122247746 2107.0927226515605 2063.1271356485718 1765.7949674675021 2268.7775102385285 2220.5683837255733 2563.120210341177 2748.4149684937165 0.9304140969593682 0.9567519178811703 1.0463811201640354 1.132425651840533 0.7666574177502621 0.7506607114642807 0.6424775689659613 0.8254857931740723 0.8079450916913641 0.932581229444369 1.0 11.424384130081025 -6.767061595904082 24.99954270312135 0.8599515455191854 1.0143608141710196 0.41883731434479754 0.10533708885207284 153.72816550493255 683565.7958434657 0.018947799596842087 0.03652294939996588 1.7097728011404088e-07 6.767061595904082 0.15440926865183424 AEVLGHKT(ph)PEPAPR ddPTM_A549_MK2206_60min_R1 8 AEVLGHKTPEPAPR 14 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJ51;K7ER34 Q9UHD8 SEPT9 Septin-9 1 AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR 131.25 5.0154e-09 335578800.0 23896.2 28008.4 27238.6 24939.699999999997 34780.2 28014.499999999996 28027.1 26741.199999999997 39223.4 38736.8 40101.2 True False 27929.29435400191 29433.907926451062 31101.44306375857 31049.92761958567 29664.07865305235 30978.975795479924 33119.26128134137 30531.846991490376 30339.362526899 29986.129976124004 30142.965303183522 0.9265609429292673 0.9764768538993881 1.0317977262998017 1.0300886892606533 0.9841128221688066 1.0277348457222988 1.0987393226984046 1.012901241944693 1.0065155243268231 0.994796950947525 1.0 14.879533728063354 -5.442659221218348 3.048921627157504 1.0137258964715221 0.9261518454270211 0.4706409600691984 0.029544477079652888 0.21050790142317974 3.3225049660702832 0.0042268439677403844 0.03500656843251753 3.608616900730975e-06 5.442659221218348 -0.087574051044501 AEVLGHKT(ph)PEPAPR ddPTM_A549_PD325901_60min_R1 4 AEVLGHKTPEPAPR 14 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJ51;K7ER34 Q9UHD8 SEPT9 Septin-9 1 AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR 143.99 2.8677e-13 585787000.0 18756.800000000003 22930.899999999998 21096.6 21113.500000000004 23550.199999999997 23093.6 22133.0 24078.9 24291.899999999998 20724.100000000002 24232.0 True False 20660.976527973642 24863.367419000555 22528.342140161563 22417.63294276242 21896.11519577946 22905.533378258675 22975.283426642334 23598.62744996839 23270.99592035778 19415.57678920297 21251.61761930412 0.9722072407893334 1.1699517591741189 1.0600765806974486 1.0548671326741328 1.0303269891271667 1.0778254055094707 1.08110751088296 1.110439114457449 1.0950223336984632 0.9136046552788826 1.0 14.375285039271647 -10.816030935514005 1.073884064855557 1.000196320764141 1.0757532402111407 0.34905568767077944 0.05409862782205093 0.5262592152531933 1.0818914360524827 0.029579380697082335 0.0074190804456976955 1.527457251057381e-11 10.816030935514005 0.07555691944699983 AEVPGATGGDS(ph)PHLQPAEPPGEPR ddPTM_A549_MK2206_60min_R1 2 AEVPGATGGDSPHLQPAEPPGEPR 24 0 A0A087WWC8;A0A0A0MQW0;A0A0A0MR39;Q9P2K5-4;Q9P2K5-2;Q9P2K5 A0A087WWC8 MYEF2 Myelin expression factor 2 1 AEVPGATGGDS(1)PHLQPAEPPGEPR;AEVPGATGGDS(1)PHLQPAEPPGEPR 254.09 2.5385999999999996e-111 607350000.0 8748.4 8722.8 6813.900000000001 8376.599999999999 11190.8 9093.400000000001 9517.5 9562.2 13862.0 12915.599999999999 12468.5 True False 10224.916042155251 9166.753261908832 7780.213479846416 10428.867376039858 9544.64814436312 10055.657552289613 11246.70655348453 10917.671133009328 10722.279133065314 9997.956989726234 9372.227336906217 1.0909803694038975 0.9780762813778254 0.830134950868005 1.1127416142556397 1.0183969937197255 1.0729207893509118 1.2000036009793464 1.1648961063948395 1.1440481272624305 1.0667642418740741 1.0 13.194176233938828 -6.320074670166085 24.999968072557596 1.0849278951176182 0.9675637300287072 0.3402062979847654 0.07991372657332972 261.3871044964156 111445.54212096363 0.012656651685297157 0.02941140955852184 4.785478064135675e-07 6.320074670166085 -0.11736416508891101 AEVPGATGGDS(ph)PHLQPAEPPGEPR ddPTM_A549_PD325901_60min_R1 2 AEVPGATGGDSPHLQPAEPPGEPR 24 0 A0A087WWC8;A0A0A0MQW0;A0A0A0MR39;Q9P2K5-4;Q9P2K5-2;Q9P2K5 A0A087WWC8 MYEF2 Myelin expression factor 2 1 AEVPGATGGDS(1)PHLQPAEPPGEPR;AEVPGAT(0.013)GGDS(0.987)PHLQPAEPPGEPR 239.57 2.7220999999999995e-99 777440000.0 8753.3 10604.5 9921.7 11622.4 12847.9 9395.0 9650.400000000001 11035.6 21171.5 14155.9 18661.6 True False 9641.928572161114 11498.17843149598 10595.046226028884 12340.289251614464 11945.507826848803 9318.490234902325 10017.65125290151 10815.486300739283 20281.73548087448 13262.094058138995 16366.341505629154 0.5891315764640986 0.702550318135621 0.6473680279972619 0.7540041399826625 0.729882596103728 0.5693691673057939 0.6120886118290988 0.6608371392604345 1.2392345273926146 0.8103273449095229 1.0 13.99844424066706 -8.751443670365479 24.999621415599165 1.1129718591111344 0.6603651916031463 0.6247215535625343 0.1173702230934886 58.094812367508425 145297.05261388584 0.016723188143146387 0.018852853463889745 1.7723779143366474e-09 8.751443670365479 -0.45260666750798806 AEVSRREDVK ddPTM_A549_PD325901_60min_R1 1 AEVSRREDVK 10 2 A0A494C0X1;Q9P2K1-2;Q9P2K1;H0Y941;A0A140T8Y7 A0A494C0X1 CC2D2A Coiled-coil and C2 domain-containing protein 2A 0 40.431999999999995 0.057844000000000007 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AFAAVPTSHPPEDAPAQPPT(ph)PGPAAS(ph)PEQLSFR ddPTM_A549_MK2206_60min_R1 1 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 2 AFAAVPTSHPPEDAPAQPPT(0.995)PGPAAS(0.803)PEQLS(0.201)FR 54.63399999999999 0.0067497 2610400.0 815.52 882.51 1040.8 959.87 1288.6 877.44 876.04 1018.9 1442.5 1318.3 1411.6 True False 953.1598384502832 927.4259894950209 1188.4010903923077 1195.038193090202 1099.0486469980974 970.2901184024668 1035.205128354567 1163.3321952503823 1115.7760531991578 1020.495114400887 1061.0607618219367 0.898308440709486 0.8740554950901653 1.1200122869040188 1.126267444889974 1.0358017999939344 0.9144529260853934 0.9756322781902016 1.09638602906476 1.0515665957558076 0.9617687799976744 1.0 10.051291559453107 -5.741054532402443 24.96702836546898 1.0313732926371215 0.8861818257066058 0.4369605442699682 0.06354414146554815 165.12548069585975 202239.73692524183 0.008647701686231149 0.03341017180932649 1.8152877109584585e-06 5.741054532402443 -0.14519146693051577 AFAAVPTSHPPEDAPAQPPT(ph)PGPAAS(ph)PEQLSFR ddPTM_A549_PD325901_60min_R1 1 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 2 AFAAVPT(0.002)S(0.002)HPPEDAPAQPPT(0.995)PGPAAS(0.852)PEQLS(0.15)FR 48.503 0.012274 4042400.0 1065.9 668.23 932.94 886.75 838.27 1265.2 1138.9 1123.3 858.93 945.91 1149.0 True False 1174.1093833258935 724.5440872533891 996.2549186239652 941.5225335446313 779.3928070745059 1254.8966306757227 1182.2414627299931 1100.8949002881975 822.8321591095341 886.18508116999 1007.6802841111106 1.1651606187389014 0.7190217955812442 0.988661715757172 0.9343464870657482 0.77345247234049 1.2453321261343178 1.1732307174917742 1.0925041579624761 0.8165607406275358 0.879430802748817 1.0 9.976822259122388 -4.898836675888848 17.141795442818637 0.9480217842436042 12.940962054322776 0.11613788271138425 0.15650448280836127 14491423.227709485 17934851.995872445 0.02204836528432116 6686333858.255533 1.2623021563629088e-05 4.898836675888848 11.992940270079172 AFAAVPTSHPPEDAPAQPPT(ph)PGPAASPEQLSFR ddPTM_A549_PD325901_60min_R1 1 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 AFAAVPTSHPPEDAPAQPPT(0.999)PGPAAS(0.001)PEQLSFR 109.59 1.6429e-14 124090000.0 1852.9 2313.0 1923.1 2530.5 2386.6 2290.8 2508.5 2647.5 2402.7 2367.5 3130.8 True False 2041.005043967113 2507.9246274742068 2053.6131305397407 2686.8032378175267 2218.9734493230303 2272.14448431232 2603.9623402038696 2594.693535576428 2301.7228746143205 2218.015645959921 2745.7314477763844 0.7433374613602541 0.9133903570595864 0.7479293476435389 0.9785382470647009 0.8081538531818375 0.8275188333339751 0.9483674531654122 0.9449917389691285 0.8382913327078503 0.8078050195900145 1.0 11.42297481112752 -14.999999999998693 0.20591641496826055 1.6602678636680879 0.8364893872109916 0.0 0.09229421670172659 38.91084245076002 0.46447089837612965 10.441736974152452 0.05576714686716021 1.0000000000030104e-15 14.999999999998693 -0.8237784764570962 AFAAVPTSHPPEDAPAQPPTPGPAAS(ph)PEQLSFR ddPTM_A549_MK2206_60min_R1 4 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 AFAAVPTSHPPEDAPAQPPT(0.2)PGPAAS(0.781)PEQLS(0.019)FR;AFAAVPTSHPPEDAPAQPPT(0.127)PGPAAS(0.846)PEQLS(0.027)FR;AFAAVPTSHPPEDAPAQPPT(0.157)PGPAAS(0.81)PEQLS(0.033)FR;AFAAVPTSHPPEDAPAQPPT(0.014)PGPAAS(0.906)PEQLS(0.08)FR 89.896 1.9002e-09 117275300.0 4623.65 5338.549999999999 5901.990000000001 5536.7 6264.35 5596.42 5802.9400000000005 4829.61 8220.1 7464.15 8516.0 True False 5404.009082610663 5610.259392209316 6738.9809295585155 6893.191748551911 5342.872413334267 6188.629449797059 6857.259083527978 5514.222007560311 6358.260474802355 5777.993330922683 6401.242170356772 0.8442125666852364 0.8764329239392968 1.0527614407037689 1.076852205416206 0.8346618158076158 0.9667857089450089 1.0712388160040178 0.8614299944932371 0.9932854132978348 0.9026362660796893 1.0 12.64413617401304 -5.634568965387814 6.3853228591419775 0.9878950624698342 0.8525778714167664 0.22498082997913083 0.07780316747997702 0.16501646766422257 8.422037618138958 0.009473390880150829 0.03764567719059437 2.319695791704574e-06 5.634568965387814 -0.13531719105306772 AFAAVPTSHPPEDAPAQPPTPGPAAS(ph)PEQLSFR ddPTM_A549_PD325901_60min_R1 3 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 AFAAVPTSHPPEDAPAQPPT(0.015)PGPAAS(0.978)PEQLS(0.007)FR;AFAAVPTSHPPEDAPAQPPT(0.168)PGPAAS(0.662)PEQLS(0.17)FR;AFAAVPT(0.001)S(0.001)HPPEDAPAQPPT(0.031)PGPAAS(0.801)PEQLS(0.165)FR 105.03 1.2007e-14 136008000.0 4968.1 5365.1 5950.1 5369.5 6041.299999999999 5501.0 5669.5 6279.9 6178.1 5989.1 6257.4 True False 5472.457854678085 5817.235805820092 6353.909566857944 5701.161819980715 5616.979929353569 5456.20167985074 5885.25592496944 6154.642468013753 5918.45594192148 5610.947203893799 5487.779468926773 0.997208048476539 1.0600345438002357 1.157828881943129 1.0388831862253518 1.0235433040191142 0.9942457984591337 1.0724293784568568 1.1215178202518763 1.0784791873349338 1.0224440022898942 1.0 12.422006791413635 -10.804616618586273 1.111600289184413 1.000828680679987 1.062551462590382 0.13420980082841516 0.047037086761081065 0.6747578542230221 1.511101401073003 0.031168198364998116 0.00821477722018201 1.5681347589794795e-11 10.804616618586273 0.06172278191039493 AFAETHIK ddPTM_A549_PD325901_60min_R1 1 AFAETHIK 8 0 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial 0 86.01100000000001 0.013632 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AFAGPLS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 AFAGPLSPAK 10 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 AFAGPLS(1)PAK;AFAGPLS(1)PAK 109.42 0.00021392 6283700.0 3183.9 3918.9 3934.7 3230.7 4950.9 3927.3 3336.5 3624.6000000000004 6066.5 5750.8 5248.2 True False 3721.2644811186206 4118.355271024732 4492.699625640482 4022.221645031633 4222.62916841757 4342.884279269248 3942.6988616444605 4138.398149871959 4692.447436209838 4451.690285895938 3944.9270970486614 0.9433037390989124 1.0439623267324303 1.1388549180038405 1.019593403396681 1.070394728352944 1.1008782095157885 0.9994351643644143 1.0490429982769618 1.1894890122862911 1.1284594560001893 1.0 11.945782923887336 -5.326173278056994 3.5150500153966906 1.0799960513355222 0.935338494420432 0.3109687563101379 0.05723525637071117 0.2839806318213786 5.8704203958142305 0.00995298051930001 0.09624404146898505 4.718747315937123e-06 5.326173278056994 -0.1446575569150902 AFAGPLS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 AFAGPLSPAK 10 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 AFAGPLS(1)PAK;AFAGPLS(1)PAK 121.36 4.4335e-05 13594100.0 6308.5 7589.6 7023.299999999999 7127.0 7620.4 8405.8 6928.5 6328.0 7430.299999999999 6848.7 7571.299999999999 True False 6948.934275927756 8229.202227703518 7499.943372533808 7567.218603408615 7085.169392952831 8337.345951734103 7192.167858920677 6201.783075780034 7118.030330564276 6416.271913193545 6640.078098425111 1.0465139374755092 1.239323108210928 1.129496259134759 1.1396279518464403 1.0670310330586754 1.255609622078323 1.0831450703308008 0.9339924898249266 1.0719799112381712 0.9662946456481214 1.0 12.696984494840914 -7.9976909256980715 24.99399063742694 1.0265417460895034 1.1477932887553544 0.4984988295124696 0.06885276889247227 51.48392542165652 557266.0241777224 0.009874644947120773 0.01359670664604035 1.0053309995438179e-08 7.9976909256980715 0.12125154266585092 AFAGPLS(ph)PAKAEDFR ddPTM_A549_MK2206_60min_R1 2 AFAGPLSPAKAEDFR 15 1 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 AFAGPLS(1)PAKAEDFR;AFAGPLS(1)PAKAEDFR 50.387 0.006531100000000001 12138300.0 2296.87 2372.2 1972.35 2348.2 3027.8999999999996 2528.3 2265.6 2165.9 2974.7 3377.8999999999996 3095.7 True False 2684.5255029199793 2492.934847514575 2252.0588880046776 2923.509105414702 2582.499921034874 2795.843027850288 2677.2301935985884 2472.9229577905635 2300.9351996197797 2614.8300439465634 2326.952253026473 1.1536659161907772 1.071330468544089 0.9678148251970413 1.2563683253974538 1.1098207613310636 1.2015042527039252 1.1505307812468166 1.0627304254198764 0.988819257733864 1.1237145242433193 1.0 11.18422589290056 -8.541193820410076 3.3192870588133636 0.9948265490531952 1.1280588831820715 0.1661856650710729 0.07925897109389064 0.1683537487078214 3.8862418274096373 0.011729433891705977 0.01366175413799851 2.876114552896847e-09 8.541193820410076 0.13323233412887625 AFAGPLS(ph)PAKAEDFR ddPTM_A549_PD325901_60min_R1 2 AFAGPLSPAKAEDFR 15 1 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 AFAGPLS(1)PAKAEDFR;AFAGPLS(1)PAKAEDFR 68.12899999999999 0.00076158 19150700.0 3593.1 2904.7 3432.0 3589.3 3779.5 3821.6 3632.3999999999996 4143.2 3969.2000000000003 3816.7000000000003 3587.7 True False 3957.8688668995833 3149.4892630455365 3664.916158292544 3811.002909108257 3514.040958567166 3790.478156647444 3770.6329697255464 4060.5606257224754 3802.388327264812 3575.7129106379043 3146.4356443041193 1.2578896612947965 1.0009705009371304 1.1647834478760153 1.2112127308267628 1.1168323003613658 1.2046895551508299 1.1983823589563605 1.290527150324261 1.2084748449084413 1.1364328767095206 1.0 11.619502719676674 -10.701717049529478 1.0026179988292236 1.0018525565053573 1.1809575708199287 0.16541213651981235 0.08185575901753227 0.37989275638269165 0.6897264285022116 0.047014810358878716 0.012822550637150824 1.9873893146386344e-11 10.701717049529478 0.17910501431457138 AFAHDAGGLPS(ph)GTGGLVK ddPTM_A549_MK2206_60min_R1 1 AFAHDAGGLPSGTGGLVK 18 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 AFAHDAGGLPS(0.934)GT(0.066)GGLVK 69.485 0.00042721 4605400.0 1005.4 1321.7 1126.0 1052.1 1667.3 1473.2 1353.5 1534.4 2326.0 1863.0 2350.9 True False 1175.0869403299914 1388.9688845628593 1285.6837315351067 1309.8645472305634 1422.0423786589547 1629.093046168986 1599.4134300122216 1751.905898902923 1799.1647138587448 1442.1470060903075 1767.1066484607481 0.6649779408354102 0.7860130489423099 0.727564311217442 0.7412481574734219 0.8047292334606039 0.9218985439209455 0.9051029440726756 0.9913979444471753 1.0181415566660457 0.816106377816246 1.0 10.787173396743144 -7.380677670667958 0.8938215225737894 1.0094680390509423 0.7192885456964591 0.6724249586243777 0.06621888445679339 0.08704166457662069 0.13799943878742815 0.005327393174193081 0.011904195682937269 4.1621941006731144e-08 7.380677670667958 -0.29017949335448323 AFAHDAGGLPS(ph)GTGGLVK ddPTM_A549_PD325901_60min_R1 2 AFAHDAGGLPSGTGGLVK 18 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 AFAHDAGGLPS(0.962)GT(0.038)GGLVK;AFAHDAGGLPS(0.839)GT(0.161)GGLVK 106.49 1.4369e-09 24860000.0 5358.5 5586.4 5685.700000000001 6561.5 6801.5 6359.4 5688.4 6249.9 6761.1 6578.3 7044.9 True False 5902.490975280793 6057.185533472502 6071.565792891586 6966.788952752301 6323.786103901197 6307.611154852351 5904.8751748119175 6125.240841548297 6476.954479358591 6162.945015340299 6178.421961300578 0.9553395692705811 0.9803774445016127 0.9827049416374762 1.1276000565176305 1.023527713631592 1.02090973947085 0.9557254606108065 0.9913924429109263 1.0483185706524925 0.997495000170396 1.0 12.593022689244883 -6.021990572780676 24.84834309843725 1.0229148414838654 0.9712791357743316 0.21395129211390607 0.04114820393447723 778.8405891701834 880055.975703827 0.005834633120306656 0.015596199416703895 9.506254286344324e-07 6.021990572780676 -0.0516357057095338 AFAS(ph)LR ddPTM_A549_PD325901_60min_R1 1 AFASLR 6 0 P26373;P26373-2;H3BUK8;J3KS98 P26373 RPL13 60S ribosomal protein L13 1 AFAS(1)LR 84.09700000000001 0.040706 2903400.0 982.1 1057.4 654.38 682.8 780.35 771.62 988.73 1069.8 903.84 800.07 868.99 True False 1081.8020690161923 1146.5108089456235 698.7901619066075 724.9750052486886 725.5409080613534 765.3361825497951 1026.3566612038162 1048.4619997581353 865.8547479882664 749.5534436592 762.109738981475 1.4194833285583932 1.5043907068788849 0.9169154075376452 0.9512737709107153 0.9520163185829457 1.0042335682163466 1.3467308035920067 1.3757362570374145 1.1361287012884023 0.9835242948882192 1.0 9.573854941411023 -5.750249809796779 24.995817382681984 1.0786837611250664 1.4619372239909194 0.49975944481084633 0.14961475668912808 143.33960146929257 320192.77925205394 0.021974707501125963 0.08353217078725017 1.7772568230658503e-06 5.750249809796779 0.38325346286585305 AFDQLR ddPTM_A549_PD325901_60min_R1 1 AFDQLR 6 0 Q9H0I9 Q9H0I9 TKTL2 Transketolase-like protein 2 0 113.85 0.057373 21359000.0 9367.8 9587.4 10027.0 9034.5 11527.0 9223.0 9677.8 9493.8 9522.8 10609.0 11248.0 False True 10318.812159790128 10395.363844983223 10707.492517249231 9592.540546161797 10717.383285991194 9147.890945875906 10046.093974895362 9304.43871125798 9122.58983242904 9939.145929456736 9864.567306946708 1.0460481274757523 1.0538083953933512 1.085449790555834 0.972423852732664 1.0864524466718297 0.9273484240341578 1.018401888526912 0.9432181282503612 0.9247835762654119 1.0075602527905616 1.0 13.26804005554881 -7.262632729711649 24.999523899561936 0.9640547855784773 1.0469016600114998 0.4784286786460611 0.04057288046781039 71.94962513363164 1507289.330008419 0.006105550393358938 0.010081455691977907 5.462195879441207e-08 7.262632729711649 0.08284687443302241 AFEEDIET(ph)PPTR ddPTM_A549_MK2206_60min_R1 2 AFEEDIETPPTR 12 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 AFEEDIET(0.989)PPT(0.011)R;AFEEDIET(0.998)PPT(0.002)R 84.289 0.00052268 3412600.0 656.1099999999999 538.43 695.47 463.41999999999996 732.5799999999999 423.27 512.1700000000001 482.5 729.27 496.05 607.74 True False 766.8453276505969 565.8337871795264 794.0981037040146 576.9579208037144 624.8184524428576 468.0601504561132 605.2246593641371 550.895852594278 564.0915094048872 383.99196047831265 456.82138522928847 1.678654617418361 1.2386324403257136 1.738312017300678 1.2629836068513447 1.3677521951588318 1.0246020996175207 1.3248606105871374 1.2059327133246434 1.2348185256733495 0.8405735214991715 1.0 8.835486379096505 -2.000000000006929 0.12113975311009474 0.9219453734780063 2.9919666121783144 0.5760917008450943 0.16686570952785607 44.914049646670485 0.3597659703393234 0.5057201286697629 15.812417132464953 0.00999999999984045 2.000000000006929 2.070021238700308 AFEEDIET(ph)PPTR ddPTM_A549_PD325901_60min_R1 2 AFEEDIETPPTR 12 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 AFEEDIET(1)PPTR;AFEEDIET(0.995)PPT(0.005)R 118.9 1.9658e-05 2668500.0 1013.96 912.0799999999999 964.67 1216.46 1227.1599999999999 1009.9300000000001 1097.42 999.45 857.88 898.3100000000001 1023.8100000000001 True False 1116.8964727620998 988.9441825450377 1030.1383072319552 1291.597971418893 1140.9685150721741 1001.7054649212248 1139.1829186312668 979.5151856966434 821.8262869580615 841.5905532934568 897.8878604663153 1.2439153283373752 1.1014116863451442 1.147290605640838 1.4384847243041081 1.2707249594393843 1.1156242433225372 1.2687362963562463 1.0909103784830494 0.9152883373779533 0.9373002914377073 1.0 9.810391464082493 -8.516445100601958 3.7039396058191216 0.9604392940954772 1.2235269306302983 0.6466198741178417 0.08948741842462321 0.10967414232421314 3.2874002285360495 0.01591404334114266 0.01868773631592224 3.0447728570638827e-09 8.516445100601958 0.26308763653482103 AFES(ph)PQPR ddPTM_A549_MK2206_60min_R1 1 AFESPQPR 8 0 E9PDB0;A0A3B3IS43 E9PDB0 WDR49 1 AFES(1)PQPR 48.283 0.035792000000000004 1977200.0 249.08 411.53 430.29 355.29 182.53 152.27 194.15 219.16 239.75 604.04 517.9 True False 291.1186145786697 432.47511921325076 491.31159222223897 442.3360659495743 155.6800787960289 168.38311033135446 229.42454188169404 250.2266011493511 185.44700780207833 467.58694447600055 389.2911366871499 0.7478172173558227 1.1109297861071141 1.2620672445904588 1.136260305625847 0.39990655867703384 0.43253774479503226 0.5893392380676493 0.6427749762780839 0.47637099929945503 1.2011240442182796 1.0 8.60470568780423 -6.738997207130487 24.886955410764926 0.681403934392841 1.081730215871625 0.34752476208798355 0.2545298593568268 198.24538314667691 219840.4327393648 0.036847528940737166 0.07665856118292842 1.8239074315017773e-07 6.738997207130487 0.40032628147878413 AFET(ph)PEEK ddPTM_A549_PD325901_60min_R1 1 AFETPEEK 8 0 Q8WUQ7-2;Q8WUQ7 Q8WUQ7-2 CACTIN Cactin 1 AFET(1)PEEK 98.249 0.0025851999999999997 3797400.0 4204.5 3795.0 3682.8 4534.1 4159.2 4555.6 3888.6 3962.5 3872.1 4250.4 5033.6 True False 4631.337744810694 4114.817968553657 3932.7369544754597 4814.161059311775 3867.072140461051 4518.500704004366 4036.5828009235656 3883.4648289788875 3709.3691025904677 3982.029018622199 4414.499110619395 1.0491196461382626 0.9321143498829044 0.8908682176455712 1.0905339289186773 0.8759934125161631 1.0235590926125202 0.9143920294860352 0.8797067870365936 0.8402695322029432 0.9020341648825214 1.0 12.108034037004598 -7.81275178914127 24.993870062821298 0.9178830199477308 0.9716399364016038 0.18679951944435302 0.07042529488994381 194.49267825203822 94734.99351819814 0.012457612843853749 0.017212675447133344 1.539033987891957e-08 7.81275178914127 0.05375691645387304 AFFSAPPSAT(ph)PPPQQHPPGPGPHLQNLR ddPTM_A549_PD325901_60min_R1 2 AFFSAPPSATPPPQQHPPGPGPHLQNLR 28 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 AFFS(0.003)APPS(0.185)AT(0.812)PPPQQHPPGPGPHLQNLR;AFFSAPPS(0.11)AT(0.89)PPPQQHPPGPGPHLQNLR 73.126 1.1382e-05 6602300.0 3388.0 3409.5 3709.8 3717.3 4388.9 4061.4 4077.8999999999996 4797.1 4312.1 4490.5 4344.3 True False 3731.947265886222 3696.830530641292 3961.5693368396514 3946.9091783991666 4080.6388048830327 4028.3253049528794 4233.086716012505 4701.41807724785 4130.877432731683 4206.9690636464775 3809.9786407866827 0.9795192093558958 0.9703021668063662 1.0397878073200086 1.035939975134404 1.0710398114044188 1.057309157019608 1.111052610819482 1.2339749170554677 1.0842258768880504 1.1041975455216264 1.0 11.895567194475827 -5.916450307638168 1.5553081342518538 1.0636581902155575 0.9676629219630792 0.29565957572108315 0.05911981010150822 0.5959304418298625 2.5320544905016393 0.010060218712310305 0.059543838320025896 1.2121313739930659e-06 5.916450307638168 -0.09599526825247828 AFGGEEVILKGS(ph)PEEK ddPTM_A549_MK2206_60min_R1 2 AFGGEEVILKGSPEEK 16 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 AFGGEEVILKGS(1)PEEK;AFGGEEVILKGS(1)PEEK 92.31 2.4428e-06 7250100.0 2690.9 3100.2 2906.5 2384.9 3822.3 2942.0 3068.1 3261.3999999999996 4046.7 3861.6 4077.0 True False 3145.058133811393 3257.9869379751635 3318.6854047129555 2969.20060706223 3260.044733370194 3253.3204872584515 3625.534055870333 3723.7134376186063 3130.128911252015 2989.2618780023245 3064.5683805242525 1.0262646295637141 1.063114453141301 1.0829209835237 0.9688805203146722 1.0637859328211503 1.061591742554594 1.1830488361464189 1.215085772366285 1.0213930715804576 0.9754267181634741 1.0 11.581468181049292 -8.971537625326773 24.999221975906234 1.009438023914733 1.082934370330871 0.2484331345823655 0.06478459727248766 221.93855722033038 194935.8863654116 0.011935020924188194 0.012515747220318263 1.0677322849938927e-09 8.971537625326773 0.073496346416138 AFGGEEVILKGS(ph)PEEK ddPTM_A549_PD325901_60min_R1 1 AFGGEEVILKGSPEEK 16 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 AFGGEEVILKGS(1)PEEK 91.725 2.5962000000000002e-06 6223200.0 2420.5 2987.3 3178.7 2530.0 3203.3 3153.1 3057.0 3602.5 3105.4 3618.4 3486.4 True False 2666.2273781220792 3239.050254930262 3394.425697075905 2686.272353953107 2978.311258785076 3127.4221990069736 3173.335807854587 3530.6453113934226 2974.8908373193954 3389.9336064799922 3057.594902110509 0.8720015121302408 1.0593457794865184 1.1101620082938057 0.8785573105511473 0.9740699321317199 1.0228373277468072 1.037853577550181 1.1547132384857097 0.9729512680917846 1.1086928501025712 1.0 11.578181562704819 AFGPGLQGGSAGS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 AFGPGLQGGSAGSPAR 16 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 AFGPGLQGGSAGS(1)PAR;AFGPGLQGGS(0.006)AGS(0.994)PAR 172.91 4.432399999999999e-28 148527000.0 8832.099999999999 11717.400000000001 9235.1 9203.6 12083.400000000001 10678.1 9203.0 10451.7 14311.9 14378.2 14016.9 True False 10322.742555886727 12313.765610938064 10544.776047157955 11458.482413165311 10305.94786678319 11808.049454450882 10875.065974438481 11933.26048198884 11070.277501407989 11130.154633906417 10536.116883240233 0.9797482953427634 1.1687195337141267 1.0008218553394654 1.0875432135146756 0.9781542840680544 1.120721190292973 1.0321702098557215 1.1326051726866317 1.0506980535701387 1.0563810896603774 1.0 13.363055634996046 -10.082073517834246 0.9739694668409311 1.0053003122946784 1.0630085573798234 0.01546955769144509 0.06160464503164128 0.6755736551138686 1.2860097960105952 0.020729231319230802 0.010152622536225953 8.278020206397411e-11 10.082073517834246 0.05770824508514494 AFGS(ph)GYR ddPTM_A549_MK2206_60min_R1 2 AFGSGYR 7 0 E7EX17;P23588;P23588-2;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 AFGS(1)GYR;AFGS(1)GYR 102.0 0.010785 33014000.0 11108.5 15874.8 10404.099999999999 8636.9 13817.0 11493.7 10194.400000000001 12227.400000000001 13480.0 15729.800000000001 13833.2 True False 12983.343223250153 16682.759513246936 11879.557825279213 10752.940887725177 11784.537603269226 12709.955705099423 12046.590521549017 13960.671394842017 10426.801523136663 12176.427255179446 10398.034663102311 1.2486343471542631 1.6044146854449457 1.1424810755280634 1.0341320486151349 1.133342788814405 1.2223421172273086 1.1585449473732423 1.3426259718465656 1.0027665670452544 1.1710316083468932 1.0 13.344023249287217 -2.000000000011522 0.14827671656499214 0.932608256094123 2.5877982233048864 0.134083250157639 0.1541111754477527 45.81760221812277 0.4254806474938316 0.2702592591550117 16.410202333715933 0.009999999999734699 2.000000000011522 1.6551899672107635 AFGS(ph)GYR ddPTM_A549_PD325901_60min_R1 3 AFGSGYR 7 0 E7EX17;P23588;P23588-2;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 AFGS(1)GYR;AFGS(1)GYR;AFGS(1)GYR 130.22 0.005710499999999999 60420000.0 15261.1 15415.4 12737.8 10370.8 17529.1 12999.4 13140.6 12420.0 11214.6 14384.6 15119.2 True False 16810.395637371978 16714.50985835101 13602.263706613861 11011.380762204304 16297.916488112105 12893.53719633733 13640.672723812222 12172.273356698488 10743.289361822026 13476.353901108814 13259.634248505396 1.267787279974696 1.260555875455995 1.025840038396767 0.8304437781491212 1.2291377109401929 0.9723901093117007 1.0287367259281512 0.9179946541942156 0.8102251661302794 1.016344316030274 1.0 13.694753360494298 -3.532168887102883 0.40916027195201 0.9179349042363788 2.8330786648989013 0.42352808752678783 0.11545818698259099 11.507348833030578 0.4306815237104038 0.026915152897455868 14.747447484669808 0.00029365074898913174 3.532168887102883 1.9151437606625223 AFGS(ph)GYRR ddPTM_A549_MK2206_60min_R1 1 AFGSGYRR 8 1 E7EX17;P23588;P23588-2;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 AFGS(1)GYRR 61.56 0.004507 12117000.0 1723.7 2748.3 1941.2 1564.9 2740.5 1543.4 1360.0 1531.0 2597.1 2474.9 2577.9 True False 2014.6184195810677 2888.176731061591 2216.4913496056392 1948.3005702510295 2337.3760803183977 1706.7215635739956 1607.0943958748599 1748.023938490859 2008.8609967164864 1915.818371107301 1937.7362835794638 1.039676263820371 1.4904900917303543 1.1438560388162047 1.0054518701853747 1.2062405499270021 0.8807811352023978 0.8293669316580948 0.9020958906037717 1.036705053076489 0.9886889084660813 1.0 10.920156525043323 -6.073703267820807 3.9843351050029128 0.9996277969044115 1.2760738033386738 0.40007350513406037 0.13514891320399505 0.15548952038692873 4.686314564833492 0.017889905898540514 0.05250174131051365 8.43911164051483e-07 6.073703267820807 0.2764460064342623 AFGS(ph)GYRR ddPTM_A549_PD325901_60min_R1 1 AFGSGYRR 8 1 E7EX17;P23588;P23588-2;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 AFGS(1)GYRR 97.565 0.0010275 23189000.0 4635.7 4639.8 4516.7 3559.6 6107.7 5838.5 5275.9 5284.7 5111.0 4812.9 5671.3 True False 5106.3128513780275 5030.812229379519 4823.230423123527 3779.4684075618493 5678.716222421129 5790.953191748508 5476.677261583254 5179.292512733054 4896.202443981271 4509.012672625349 4973.766053332758 1.0266491822542507 1.0114694128021031 0.9697340750258323 0.7598806150179402 1.1417336805811376 1.1642994724024425 1.1011127589954721 1.0413221002348068 0.9844054568470276 0.9065590589255816 1.0 12.280122935032708 -5.302852353742434 5.102077058126736 1.0072269062271988 1.0270357956715852 0.002508993256954528 0.10704393664618206 1.758371045157774 111.23633858178798 0.014146836661273319 0.10088727072982323 4.97906328462994e-06 5.302852353742434 0.019808889444386413 AFGSGIDIKPGT(ph)PPIAGR ddPTM_A549_MK2206_60min_R1 2 AFGSGIDIKPGTPPIAGR 18 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 AFGS(0.022)GIDIKPGT(0.978)PPIAGR;AFGSGIDIKPGT(1)PPIAGR 89.462 2.536e-06 195965000.0 5062.5 6414.9 6141.9 5901.6 8320.4 6775.799999999999 6427.5 5378.700000000001 9001.0 8038.6 9432.9 True False 5916.926233758284 6741.391009746752 7012.913775058144 7347.492264932891 7096.480181967231 7492.810658587972 7595.293551092391 6141.14719657791 6962.28787164341 6222.674676949833 7090.450595204132 0.8344922729960772 0.9507704650401939 0.9890646131575287 1.0362518102731888 1.0008503813237453 1.0567467550871859 1.0712004052647552 0.8661152227379857 0.9819246010052719 0.8776134313887965 1.0 12.791661597713638 -5.2754545661186745 2.122953766058167 0.9961451308625721 0.7932069284310479 0.3263177130076821 0.06190358069846729 0.4383444511043674 2.217695820596939 0.006932268494447301 0.16704838729017085 5.303290703033333e-06 5.2754545661186745 -0.20293820243152416 AFGSGIDIKPGT(ph)PPIAGR ddPTM_A549_PD325901_60min_R1 2 AFGSGIDIKPGTPPIAGR 18 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 AFGSGIDIKPGT(1)PPIAGR;AFGS(0.006)GIDIKPGT(0.994)PPIAGR 82.59299999999999 7.3567e-05 513060000.0 13554.099999999999 14584.7 14028.0 15223.5 17704.5 16803.7 16267.900000000001 16371.2 16780.1 16769.4 16722.4 True False 14930.102253998944 15813.803854009104 14980.024437216724 16163.821019922982 16460.99699720924 16666.85623844899 16886.983836636464 16044.66357304206 16074.890751369609 15710.577222116284 14665.65081202754 1.018032029083532 1.0782885844411314 1.0214360500750066 1.1021550442662094 1.1224184462178322 1.136455275805437 1.1514650152986852 1.0940301101321444 1.0960911968656943 1.0712499174759966 1.0 13.84015347399592 -10.558152054919471 0.8697567558109697 1.0003831228431654 1.0928880402023473 0.12279058188952274 0.044451138027394685 0.48583032486371824 0.6613995267142717 0.027967655897014443 0.007923359926024966 2.765973055059015e-11 10.558152054919471 0.09250491735918187 AFGYYGPLR ddPTM_A549_MK2206_60min_R1 1 AFGYYGPLR 9 0 P84103;P84103-2;A0A087X2D0 P84103 SRSF3 Serine/arginine-rich splicing factor 3 0 59.205 0.027105 1266000.0 1470.2 1770.0 1641.5 1716.0 2692.5 1681.6 1643.1 1704.5 2660.0 2650.6 2633.6 False True 1718.333817061023 1860.0854397187418 1874.2893830505138 2136.4200770341668 2296.4368167331813 1859.5457958442605 1941.6300013691023 1946.1180948123256 2057.5142471471468 2051.827619078351 1979.6044363376698 0.8680187746194358 0.9396248086612485 0.9467999508619045 1.079215644205471 1.160048328130473 0.9393522067895941 0.9808171600995089 0.9830843268934601 1.0393562518750528 1.0364836436082636 1.0 10.95099646509501 -5.866139053015044 2.393832080541831 1.0210353020386262 0.893451236557551 0.4187595628048032 0.05766476760133313 0.22994806559194894 2.5710223357946727 0.008167491113840516 0.0364468281875268 1.3610088429796432e-06 5.866139053015044 -0.12758406548107526 AFGYYGPLR ddPTM_A549_PD325901_60min_R1 2 AFGYYGPLR 9 0 P84103;P84103-2;A0A087X2D0 P84103 SRSF3 Serine/arginine-rich splicing factor 3 0 ; 155.73 3.8497e-05 7967400.0 5772.6 5889.799999999999 5410.1 5456.2 6702.700000000001 6557.3 5941.0 6419.5 6910.5 6657.8 6971.9 False True 6358.630102436482 6386.1541162549 5777.261919574153 5793.217082070728 6231.925475059699 6503.899522865882 6167.088006039939 6291.458036499669 6620.075716911088 6237.425371772745 6114.400498515451 1.0399433442379722 1.0444448507757105 0.9448615479108453 0.9474709881168718 1.0192210138300204 1.06370191557537 1.008616953949497 1.028957464926808 1.0827023382780394 1.0201205127611717 1.0 12.577995337753604 -6.994332553593526 24.864275882431297 1.0382593700112668 0.9928850333364365 0.20172870073253435 0.03645930036260631 183.79219467906876 806323.937200632 0.006199394161320346 0.011689278565780618 1.0131352975592726e-07 6.994332553593526 -0.04537433667483026 AFHAALRNS(ph)PVNTK ddPTM_A549_MK2206_60min_R1 2 AFHAALRNSPVNTK 14 1 Q9BPX5 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein 1 AFHAALRNS(0.999)PVNT(0.001)K;AFHAALRNS(1)PVNTK 132.84 2.0621999999999998e-09 27626000.0 3596.2 4672.7 4455.2 3828.0 6451.1 4103.5 3892.0 4354.2 6115.4 6175.8 6394.6 True False 4203.150641351415 4910.52047128461 5087.014352340328 4765.860171845449 5502.1517357204975 4537.729646317155 4599.126021135996 4971.421184178247 4730.271664287087 4780.682490720619 4806.644338018247 0.8744459431097311 1.0216109464236311 1.0583296775474915 0.99151504390491 1.1446970794575169 0.9440535490479073 0.9568267792894762 1.0342810565068636 0.9841110204208185 0.9945987584119169 1.0 12.230814341568228 AFHAALRNS(ph)PVNTK ddPTM_A549_PD325901_60min_R1 3 AFHAALRNSPVNTK 14 1 Q9BPX5 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein 1 AFHAALRNS(0.999)PVNT(0.001)K;AFHAALRNS(0.995)PVNT(0.005)K;AFHAALRNS(1)PVNTK 171.78 5.6001e-23 91001000.0 12243.099999999999 11958.9 12882.7 12321.9 14117.4 14151.4 14036.5 13093.7 13521.6 13148.6 14722.5 True False 13486.010499106145 12966.718472763205 13756.99749196835 13082.995777934708 13125.842526386055 14036.155690281717 14570.66668856752 12832.535881691056 12953.334174630625 12318.395152045885 12911.725833616903 1.0444777617562198 1.0042591238270504 1.0654654280336948 1.0132646825470757 1.0165831195247097 1.087085945841357 1.1284832776290377 0.9938668189716615 1.003222523584368 0.9540471437190662 1.0 13.656394229550964 AFHGIS(ph)PGLLASEK ddPTM_A549_MK2206_60min_R1 2 AFHGISPGLLASEK 14 0 Q9P1Z0 Q9P1Z0 ZBTB4 Zinc finger and BTB domain-containing protein 4 1 AFHGIS(1)PGLLASEK;AFHGIS(1)PGLLASEK 69.331 0.00088169 2708600.0 787.04 1311.19 975.4 1053.26 1463.79 1182.44 947.3900000000001 946.4100000000001 1651.8 1534.76 1550.91 True False 919.8731107194311 1377.9239704546992 1113.7263869798778 1311.3087472826373 1248.4684300708873 1307.5650159598517 1119.5184997852084 1080.5665157590686 1277.6699373825772 1188.0566500628881 1165.7762440615327 0.7890648959483153 1.1819797988454883 0.9553517603855826 1.1248374239588836 1.0709331541370728 1.1216260604216215 0.9603202205294873 0.9269073042648427 1.0959821354149488 1.0191120775662155 1.0 10.187075192788313 -5.2403909664878165 24.472516521495557 1.0455237720251376 0.7890645542101447 0.4752045474740184 0.07753277743172064 2649.0548502286047 3079936.1763826837 0.010113213779171869 0.6246490011222898 5.749221400711445e-06 5.2403909664878165 -0.2564592178149929 AFHGIS(ph)PGLLASEK ddPTM_A549_PD325901_60min_R1 1 AFHGISPGLLASEK 14 0 Q9P1Z0 Q9P1Z0 ZBTB4 Zinc finger and BTB domain-containing protein 4 1 AFHGIS(1)PGLLASEK 100.41 9.7103e-06 1884100.0 884.0 750.69 892.77 1066.4 898.98 899.5 992.36 1050.2 848.83 715.96 993.66 True False 973.7430292335954 813.9532808467845 953.3587408621311 1132.2691060298794 835.8387461126366 892.1747702282747 1030.1248028402279 1029.2529371340386 813.1566269858389 670.7541634135017 871.4461193297187 1.1173875327858014 0.9340259400923658 1.0939961974877073 1.2992990397395712 0.9591399027119774 1.0237864974537951 1.1820866258863583 1.1810861444029361 0.9331117655458564 0.7697023929940945 1.0 9.767267656444842 -8.776005674652142 24.96113140633242 0.9684138829605563 1.095491934423387 0.3258273773229925 0.1161421642781952 237.93768424974408 407733.9152389429 0.017473783579592384 0.018641082313758744 1.6749209907470267e-09 8.776005674652142 0.1270780514628308 AFHRLS(ph)R ddPTM_A549_MK2206_60min_R1 2 AFHRLSR 7 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AFHRLS(1)R;AFHRLS(1)R 59.35 0.008512100000000002 45254000.0 5003.1 6606.2 4374.3 3179.8999999999996 5374.799999999999 3680.2 3297.4 3646.6000000000004 4679.5 5603.0 4796.0 True False 5847.500965948858 6942.427362638391 4994.641515856143 3958.975642751133 4584.174039954508 4069.63632128095 3896.4948977630606 4163.5167172441315 3619.600721625967 4337.278408547497 3605.020837133755 1.622043597006788 1.9257662233536794 1.3854681405467921 1.0981838445901457 1.2716081950858427 1.128880110583937 1.0808522540638206 1.1549216787757655 1.0040443273841946 1.203121591939518 1.0 11.815791882974969 -6.042606149384805 2.398375569305105 1.0494309925279623 1.7787318009971473 0.8058601541540229 0.11978884196498464 0.07587856285889051 0.8488254770172999 0.016487137278313982 0.06011400419489193 9.065543593075407e-07 6.042606149384805 0.729300808469185 AFHRLS(ph)R ddPTM_A549_PD325901_60min_R1 2 AFHRLSR 7 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AFHRLS(1)R;AFHRLS(1)R 76.605 0.004908699999999999 88886000.0 5107.9 5355.3 4554.0 4358.8 5943.700000000001 5317.6 5437.2 5310.6 4787.9 4931.4 6135.4 True False 5626.450247762764 5806.609925426982 4863.0618254266465 4628.033176446961 5526.23501665185 5274.295228644658 5644.11562135 5204.675916914894 4586.681213370751 4620.030562402009 5380.784695505052 1.0456560829246586 1.0791381283621424 0.903783016906271 0.8601037652209134 1.027031433030261 0.9802093053547837 1.0489391307674747 0.9672707999750902 0.8524186476374587 0.858616507414141 1.0 12.393600865206578 -8.532507239882577 24.587535758271517 0.9292317484472635 0.9893235120376294 0.2041199926845938 0.07148352088502924 299.78867505730085 765543.6395691518 0.01365413549739218 0.015492465302275524 2.9342205887832646e-09 8.532507239882577 0.06009176359036583 AFKES(ph)PK ddPTM_A549_MK2206_60min_R1 2 AFKESPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFKES(1)PK;AFKES(1)PK 47.938 0.016246 1175780000.0 9081.8 9935.1 10115.099999999999 9530.8 12564.8 8973.6 10902.5 9550.7 12934.9 12437.0 12352.8 True False 10614.585811307854 10440.754153756876 11549.573279618786 11865.846427853874 10716.534564489908 9923.180395806407 12883.343125754149 10904.540972792056 10005.165802790834 9627.473062128365 9285.25884006377 1.143165311182101 1.1244440605906867 1.243861208239561 1.2779230640997812 1.1541449462076931 1.0687026141899405 1.3875050063403152 1.174392783294468 1.077532244940855 1.0368556469947847 1.0 13.180726412601073 -8.895520595242859 2.429771075852397 1.0305686130863716 1.1998950376346613 0.4378049900792602 0.0814871633092017 0.18446981674053492 2.1234544684792036 0.015463255635353347 0.016053332903774805 1.2719774285612247e-09 8.895520595242859 0.16932642454828972 AFKES(ph)PK ddPTM_A549_PD325901_60min_R1 2 AFKESPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFKES(1)PK;AFKES(1)PK 58.978 0.008764200000000002 1872440000.0 15620.6 15247.7 14304.3 14176.4 17297.2 15191.2 15676.400000000001 16949.5 15474.6 15890.0 16997.0 True False 17206.391812722068 16532.67719080781 15275.075816743609 15052.044031059613 16082.304344100536 15067.487903826308 16272.973980455237 16611.428925874472 14824.25637637107 14886.702688195634 14906.476752860348 1.1542896485865044 1.1090935480535613 1.0247274436471068 1.0097653711613197 1.0788803156329052 1.0108014223371102 1.0916713754866774 1.1143766029546163 0.9944842515201655 0.9986734581891781 1.0 13.863651686679438 -2.0000000000000004 0.17771481524168176 0.9881645257117471 1.5490874594906194 0.3488168387299211 0.04417948489733303 40.58939273640242 0.4230660599766329 0.051856759741917696 6.193825392484648 0.00999999999999999 2.0000000000000004 0.5609229337788724 AFKES(ph)PKQILDPAASVTGSR ddPTM_A549_MK2206_60min_R1 4 AFKESPKQILDPAASVTGSR 20 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFKES(1)PKQILDPAASVTGSR;AFKES(1)PKQILDPAASVTGSR;AFKES(1)PKQILDPAASVTGSR;AFKES(1)PKQILDPAASVTGSR 100.23 8.569700000000001e-10 119715000.0 10877.6 14083.5 14395.599999999999 13072.8 15173.400000000001 10964.8 11665.100000000002 10121.6 18646.2 21204.399999999998 20101.9 True False 12713.47294821316 14800.289994507844 16437.112545014897 16275.636586860286 12941.412960081434 12125.087858154824 13784.497674499871 11556.36779609998 14422.865471862826 16414.311312904618 15110.04344578378 0.841392216629308 0.9795001614398159 1.0878269545678516 1.0771402905133107 0.8564775479644654 0.8024522167431715 0.9122738610223002 0.7648136709576836 0.9545217737866465 1.086317942883531 1.0 13.883220188227353 -5.253215942362493 23.07019209968582 0.9550598531253098 0.841392043214475 0.08226916210440804 0.10591955498384435 699.8237633136638 1963156.4783173893 0.014233184141241445 0.20933003002721215 5.581925780477605e-06 5.253215942362493 -0.1136678099108348 AFKES(ph)PKQILDPAASVTGSR ddPTM_A549_PD325901_60min_R1 3 AFKESPKQILDPAASVTGSR 20 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFKES(1)PKQILDPAASVTGSR;AFKES(1)PKQILDPAASVTGSR;AFKES(1)PKQILDPAASVTGSR 124.17 2.0498000000000003e-15 219250000.0 17672.4 17689.2 20362.1 21321.6 20541.0 25934.600000000002 23640.5 25977.300000000003 24438.1 22394.6 22806.4 True False 19466.489038266736 19179.93096425281 21743.994553254266 22638.586807133022 19098.271022603018 25723.397216189216 24540.152164077965 25459.162372702376 23411.051642781957 20980.601134113662 20001.357381681155 0.9732583977573295 0.958931466412341 1.0871259454205422 1.1318525225626563 0.9548487464203177 1.2860825755630347 1.2269243379728718 1.272871729996681 1.1704731431989548 1.048958864828313 1.0 14.28781029061792 -5.823622651624421 4.1963338986685645 1.1145835374468969 0.9644249531996688 0.27274461188546584 0.10168510485605237 0.2503443931783122 8.680991427928065 0.016090540441959025 0.05711444826271068 1.5009884430351017e-06 5.823622651624421 -0.15015858424722806 AFKPEETSSNSDPPS(ph)PPVLNNSHPVPR ddPTM_A549_MK2206_60min_R1 3 AFKPEETSSNSDPPSPPVLNNSHPVPR 27 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 AFKPEETSSNS(0.001)DPPS(0.999)PPVLNNSHPVPR;AFKPEETSS(0.001)NS(0.013)DPPS(0.986)PPVLNNS(0.001)HPVPR;AFKPEETSSNSDPPS(1)PPVLNNSHPVPR 153.48 3.2252999999999996e-34 98155400.0 5423.0599999999995 6464.09 6441.03 5563.18 8127.99 6599.04 5584.450000000001 7079.41 8846.74 9516.189999999999 8981.64 True False 6338.339946912634 6793.084570639272 7354.464907042244 6926.159349740638 6932.373438083246 7297.346032711769 6599.072278708354 8082.938047283842 6842.967515340807 7366.4760697190095 6751.250907346544 0.9388393401310873 1.0061964314268346 1.0893484789669565 1.0259075606572055 1.0268279957629198 1.080887991404819 0.9774591952326059 1.1972504293223925 1.013585128038192 1.0911275807721785 1.0 12.720939121732968 -4.00052855854838 13.318862780096126 1.0246559739684846 0.599306487057062 0.0 0.06890311420910661 0.0 0.0 0.008229041737602912 0.0 9.987836892719749e-05 4.00052855854838 -0.4253494869114226 AFKPEETSSNSDPPS(ph)PPVLNNSHPVPR ddPTM_A549_PD325901_60min_R1 4 AFKPEETSSNSDPPSPPVLNNSHPVPR 27 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 AFKPEETSSNS(0.002)DPPS(0.998)PPVLNNSHPVPR;AFKPEETSSNSDPPS(1)PPVLNNSHPVPR;AFKPEETSSNS(0.001)DPPS(0.999)PPVLNNSHPVPR;AFKPEETSSNSDPPS(1)PPVLNNSHPVPR 157.96 2.9249999999999995e-41 168623300.0 11028.890000000001 11101.86 12320.880000000001 11338.15 13266.150000000001 12405.8 12426.88 12006.59 12719.179999999998 12552.93 13480.84 True False 12148.534793760307 12037.452704181062 13157.049008270244 12038.481774693053 12334.381389732975 12304.77127792988 12899.791718649665 11767.109143462361 12184.637096739913 11760.33585750356 11822.782142085665 1.0275529606956941 1.0181573642747954 1.1128555741067896 1.0182444055904203 1.0432723230030743 1.040767826899937 1.0910961196459976 0.9952910408096649 1.0306065823006372 0.9947181396196235 1.0 13.529281950622465 -9.49132624537624 0.5015506620159828 1.001107163003641 1.0482892486652062 0.2544646485364047 0.031196629247598612 0.9251166922787617 0.5264637985770784 0.017544619253668785 0.009184326434661817 3.226069762652557e-10 9.49132624537624 0.04718208566156523 AFKWSS(ph)KLT(ph)VHKVVHT(ph)GEK ddPTM_A549_MK2206_60min_R1 1 AFKWSSKLTVHKVVHTGEK 19 3 A6NN14 A6NN14 ZNF729 Zinc finger protein 729 3 AFKWS(0.489)S(0.53)KLT(0.981)VHKVVHT(1)GEK 43.523 0.023434 12079000.0 1013.2 840.77 788.7 735.54 1388.9 830.38 920.07 874.62 1645.9 1266.9 1113.1 True False 1184.203389638301 883.5616017809746 900.5495195930188 915.7473330196448 1184.5946498647045 918.2502604383662 1087.234809421016 998.6000634114135 1273.106277962214 980.7064100997375 836.6865500028323 1.4153489017294376 1.0560246268784692 1.076328428597269 1.0944927141670258 1.4158165323210878 1.0974841897903795 1.299452954535167 1.193517528646819 1.521604808823453 1.1721312002642061 1.0 9.708543433275901 AFLAELEQNS(ph)PK ddPTM_A549_MK2206_60min_R1 2 AFLAELEQNSPK 12 0 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AFLAELEQNS(1)PK;AFLAELEQNS(1)PK 141.38 1.1139000000000001e-11 7242900.0 2546.5 2335.0 2125.79 1967.96 4177.1 2750.0 2621.8999999999996 2803.5 4686.1 3414.9 3709.6 True False 2976.28694405244 2453.841526408623 2427.2589872646663 2450.1102883450803 3562.65412337091 3041.0031746977365 3098.2652915766844 3200.9047103586695 3624.7058321639993 2643.471718248949 2788.403940248411 1.067380124196529 0.8800165180479617 0.8704832726095018 0.8786783912401182 1.2776678701198232 1.090589182866677 1.1111249868986588 1.1479343663793238 1.2999213563875127 0.9480232329658269 1.0 11.445223856047908 -6.746600307261902 24.98770499464048 1.1467342752585368 0.9171552827785064 0.4261253767536115 0.11022879466610326 170.50373297065084 287111.8294036523 0.01721268006450832 0.03571366425661026 1.7922545546814876e-07 6.746600307261902 -0.22957899248003033 AFLAELEQNS(ph)PK ddPTM_A549_PD325901_60min_R1 4 AFLAELEQNSPK 12 0 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK 133.32 5.1862000000000005e-08 30191300.0 4706.79 5548.17 4740.78 4931.89 5975.66 5747.55 5366.3099999999995 5735.049999999999 5582.56 6062.999999999999 6016.42 True False 5184.619855844339 6015.733757204308 5062.51783942603 5236.521644165133 5555.950256507858 5700.743858394133 5570.527863607508 5620.659928690307 5347.944417075342 5680.1811452819475 5276.438481228695 0.9825983709066244 1.1401125548238094 0.9594573797148014 0.9924348900862637 1.0529735684919943 1.0804151092967225 1.0557363425016812 1.0652374605875163 1.013551932065736 1.0765180273568233 1.0 12.365348744704269 -8.922966883734295 6.722597544572711 1.0059009747256453 1.0422574330542995 0.0 0.05203079085833409 0.356467723590857 25.016315252233312 0.007973284696098114 0.008434628600220087 1.194079153134105e-09 8.922966883734295 0.036356458328654195 AFLASPEYVNLPINGNGK ddPTM_A549_MK2206_60min_R1 1 AFLASPEYVNLPINGNGK 18 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 208.72 6.9134e-55 3297000.0 2184.7 2999.8 2523.2 2817.3 3965.5 2507.4 3303.8 2689.5 4876.2 4253.2 3619.2 False True 2553.423949213179 3152.4770068182374 2881.027701074049 3507.5386264734043 3382.180203066087 2772.731403722587 3904.0576949201154 3070.744861248312 3771.7484856913206 3292.3991660243105 2720.452755161486 0.9386025706083648 1.15880601154976 1.059025081618457 1.2893216468540352 1.243241661392249 1.0192168926521195 1.4350764546500534 1.1287624294971565 1.3864414585164997 1.210239420544127 1.0 11.409631058663203 -4.421604603724863 0.9948082149498609 1.196170311060688 3.9521174961115735e-14 0.24468190848216065 0.13301112272638202 11.632436044069532 2.602577800974578 0.023779265096917752 22.261983354111486 3.787872884412527e-05 4.421604603724863 -1.1961703110606485 AFLASPEYVNLPINGNGK ddPTM_A549_PD325901_60min_R1 1 AFLASPEYVNLPINGNGK 18 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 207.88 7.379399999999999e-55 2863000.0 2198.2 1852.8 1779.5 1725.8 3265.1 2582.6 2442.0 2213.0 2850.9 2113.7 2490.5 False True 2421.3596457706894 2008.9419584021653 1900.2675710027925 1832.3987464238223 3035.770639983501 2561.568161858302 2534.9316463136747 2168.8599789350837 2731.086587271807 1980.2406212737021 2184.1842885802625 1.1085876125153307 0.9197676079375123 0.8700124714467119 0.8389396242818394 1.3898875913793778 1.1727802343653622 1.1605850566581086 0.9929839667260222 1.2503920120435603 0.906627078872028 1.0 11.092878872148862 -6.722612249643835 24.999940781940662 1.1342717784899798 0.9286929785340021 0.2988631994981653 0.13972476281593485 144.01671724521267 92728.54441435442 0.01931090054767981 0.04019828157781104 1.8940339108306673e-07 6.722612249643835 -0.20557879995597772 AFLGELK ddPTM_A549_MK2206_60min_R1 1 AFLGELK 7 0 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 60.961000000000006 0.035499 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AFLIEEQK ddPTM_A549_MK2206_60min_R1 1 AFLIEEQK 8 0 P49207 P49207 RPL34 60S ribosomal protein L34 0 125.96 0.0030083 3300000.0 1331.9 1764.9 2041.1 1830.9 2125.4 1744.2 1846.7 1959.3 2748.3 2342.5 2791.4 False True 1556.6921581713905 1854.7258715026016 2330.558671790681 2279.4705821922244 1812.756475500355 1928.7700862937434 2182.2214859280157 2237.036775104599 2125.8144381332713 1813.327623063095 2098.2183412792265 0.741911424347915 0.8839527493462982 1.110732198809111 1.0863838797646261 0.8639503524667347 0.9192418388249456 1.0400354638962763 1.0661601469658009 1.0131521569090947 0.864222558438584 1.0 11.034949097701528 -7.760769635416039 24.99999306869568 1.0141246782722733 0.9437971120574682 0.06377332093301458 0.10684147943765969 33.60169487209101 1254237.5169913392 0.015456034216587044 0.022171481452605366 1.734723910397609e-08 7.760769635416039 -0.07032756621480507 AFLIEEQK ddPTM_A549_PD325901_60min_R1 1 AFLIEEQK 8 0 P49207 P49207 RPL34 60S ribosomal protein L34 0 141.47 0.0029178 5016500.0 4826.5 4291.6 4487.5 4782.6 6143.5 5570.7 5082.8 5466.9 5110.9 5265.2 5255.2 False True 5316.482726918494 4653.268193371511 4792.048735529663 5078.010339927327 5712.00175392443 5525.334066159699 5276.228735414881 5357.858390799916 4896.106646633509 4932.754373435345 4608.843715457539 1.1535393810572518 1.0096389638392333 1.039750755587063 1.1017970348823625 1.2393567902437275 1.1988547252379933 1.144805305009369 1.1625168310286305 1.0623286335816775 1.0702802433702507 1.0 12.170189131799187 -9.16228703494005 1.6566190371234542 1.0198596503849602 1.1289894300607335 0.24371677155870397 0.06499972617956377 0.2922256624408922 1.6538265287491112 0.014851485502158923 0.013753133388400755 6.881973010084891e-10 9.16228703494005 0.10912977967577331 AFLS(ph)PPTLLEGPLR ddPTM_A549_MK2206_60min_R1 2 AFLSPPTLLEGPLR 14 0 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 AFLS(0.998)PPT(0.002)LLEGPLR;AFLS(1)PPTLLEGPLR 208.18 3.7224e-38 155306000.0 13478.6 14606.0 15847.4 14956.4 21460.0 17570.5 15468.3 16617.2 23584.2 21619.9 21833.0 True False 15753.458159868527 15349.383012729908 18094.799615567907 18620.71867141832 18303.262427890095 19429.798647646036 18278.68988508168 18972.7389880407 18242.416356228478 16735.949574327347 16411.263539854303 0.9599174446020983 0.9352956264125766 1.1025841838213848 1.13463040954759 1.1152866068746703 1.1839306949438295 1.1137893094393605 1.1560803311680374 1.1115790269242385 1.0197843410219178 1.0 14.0023986989925 -5.760240455284664 24.993655298314984 1.085517410740978 0.9476064910079867 0.5386919957620204 0.053656791902996916 23.232226952784178 484254.0774065213 0.00933788866264879 0.03255775426584853 1.7368389290413031e-06 5.760240455284664 -0.1379109197329913 AFLS(ph)PPTLLEGPLR ddPTM_A549_PD325901_60min_R1 2 AFLSPPTLLEGPLR 14 0 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 AFLS(0.992)PPT(0.008)LLEGPLR;AFLS(0.997)PPT(0.003)LLEGPLR 198.72 2.5258999999999998e-31 99692000.0 29014.4 28871.7 30238.8 32019.6 37666.4 33082.1 32198.5 33358.5 35533.4 36206.2 39032.1 True False 31959.92052872765 31304.819484239957 32290.986808676185 33997.37797021224 35020.84200602575 32812.69034593529 33423.83153719525 32693.138548262996 34040.05476872706 33920.13435301126 34231.39914486798 0.9336434188235372 0.9145059876681442 0.9433148400396978 0.9931635521625816 1.0230619513335353 0.9585553370772639 0.976408571433055 0.9550628769190814 0.9944102671546918 0.9909070385776683 1.0 15.063032640582854 -6.149379775529364 3.5548160726696905 0.9916569134224992 0.924903702515843 0.6327128947390954 0.01897061960409016 0.10879550762921947 2.5132112096144774 0.00279496953990726 0.008115273489657376 7.089575379295805e-07 6.149379775529364 -0.0667532109066562 AFMES(ph)PK ddPTM_A549_MK2206_60min_R1 4 AFMESPK 7 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK 117.04 0.007056300000000001 83739000.0 13596.7 14244.1 13718.9 12733.7 23277.1 17596.0 17125.5 17730.0 22929.300000000003 19161.6 21341.2 True False 15891.490552600759 14969.063848529788 15664.44630955327 15853.457071637524 19853.069424987912 19457.997040720515 20236.98167393743 20243.281795847764 17735.85016056806 14832.981251690837 16041.591052843807 0.9906430415942789 0.9331408461429463 0.9764895675218153 0.9882721121248799 1.2375997717176823 1.212971766741994 1.2615320766670384 1.2619248133905703 1.105616650003299 0.9246577351852695 1.0 13.969529619235754 -6.553260813499693 24.300120146904074 1.1071386613197072 0.966560185029203 0.3493752596264773 0.10556882873900096 161.12716858211712 128871.85952376714 0.016731322846670747 0.034829402598035256 2.797300909255759e-07 6.553260813499693 -0.14057847629050413 AFMES(ph)PK ddPTM_A549_PD325901_60min_R1 8 AFMESPK 7 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK 101.54 0.0095398 145639600.0 54711.19999999999 54743.3 58291.2 54733.2 69432.5 57721.0 55949.0 56853.59999999999 58822.3 62662.6 66975.2 True False 60265.44074774332 59356.710012628035 62247.191365461105 58113.945455883906 64555.80072912145 57250.93931333655 58078.16981146757 55719.61034721363 56350.2032910584 58706.07274193377 58737.67499077331 1.026009980088759 1.0105389772739892 1.059748983514228 0.9893810993542496 1.0990527074703258 0.9746885507866918 0.9887720244390106 0.9486179076030202 0.9593536567443308 0.9994619765109105 1.0 15.84199854024683 AFMGT(ph)PVQK ddPTM_A549_MK2206_60min_R1 6 AFMGTPVQK 9 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK 111.06 0.00035610000000000004 120134000.0 16094.400000000001 17446.2 18250.5 17482.4 23381.5 17496.93 17582.2 17409.5 26976.600000000002 25275.9 25031.3 True False 18810.741249698636 18334.13706125486 20838.695330711773 21765.58878481475 19942.11232328576 19348.44351907786 20776.65815231687 19877.349939357682 20866.443172778087 19566.056635125056 18815.33738126485 0.9997557242013215 0.9744251027627525 1.1075376916420143 1.1568003455780485 1.0598859812709436 1.0283335943975072 1.104240531610397 1.056443981660957 1.1090124375636017 1.0398993246120438 1.0 14.199621538416512 -5.747492555825063 24.999735879844838 1.0651275787903047 0.9870903725168976 0.36341488244925524 0.04297334139467929 249.67773558519573 447540.38856089057 0.007152495816143949 0.0274211315364736 1.7885761865544262e-06 5.747492555825063 -0.07803720627340716 AFMGT(ph)PVQK ddPTM_A549_PD325901_60min_R1 10 AFMGTPVQK 9 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK 119.27 0.00016397 233866200.0 59622.80000000001 59959.899999999994 63027.50000000001 61401.2 75124.20000000001 70645.7 67808.90000000001 68819.5 73203.29999999999 69158.40000000001 77050.3 True False 65675.66276401439 65012.93120228734 67304.92516514663 65193.81267175712 69847.73535642054 70070.38484170726 70389.404795954 67446.84108464653 70126.81987233307 64791.7268213536 67573.60156209423 0.9719130140438673 0.962105462775225 0.9960239443993419 0.9647822694761904 1.0336541747332584 1.0369490928690355 1.0416701665852794 0.9981241124563824 1.037784256739559 0.9588319302740681 1.0 16.044172129997058 -6.759161849585599 24.999740347639328 1.0209240898545968 0.9744716723418434 0.3852466700314984 0.024614243047902502 32.85618731691105 360644.1389983736 0.002685381494585079 0.0053866173198326905 1.7411578709088678e-07 6.759161849585599 -0.04645241751275342 AFNRRS(ph)PLTR ddPTM_A549_MK2206_60min_R1 3 AFNRRSPLTR 10 2 Q14592-2;Q14592 Q14592-2 ZNF460 Zinc finger protein 460 1 AFNRRS(0.849)PLT(0.151)R;AFNRRS(0.982)PLT(0.018)R;AFNRRS(1)PLTR 62.258 0.0014622 27915400.0 3647.84 4386.33 3826.83 3930.86 4628.339999999999 3419.6600000000003 3480.13 3326.45 5728.05 6579.6900000000005 6441.9800000000005 True False 4263.506210874632 4609.575461469779 4369.5320376114505 4893.92087646301 3947.517317124924 3781.526151413408 4112.424573467628 3797.9844743258764 4430.655820816243 5093.333459206831 4842.258576396771 0.8804788392872649 0.9519473999052449 0.9023747841369747 1.010669050248176 0.8152223295895026 0.7809426307480101 0.8492781846705452 0.7843415246015297 0.9149977744710176 1.0518507797237235 1.0 12.241464405908228 -9.747279607487297 1.1356666704368388 0.9843647721369361 0.8761551600807748 0.38333409277015207 0.0693407100484432 0.39414974599790015 1.038900616554534 0.02079293886863071 0.013699407272468428 1.7894533971440257e-10 9.747279607487297 -0.10820961205616131 AFNRRS(ph)PLTR ddPTM_A549_PD325901_60min_R1 1 AFNRRSPLTR 10 2 Q14592-2;Q14592 Q14592-2 ZNF460 Zinc finger protein 460 1 AFNRRS(0.994)PLT(0.006)R 56.413999999999994 0.0050025 37773000.0 3565.4 3361.6 4227.6 4230.7 4404.4 4568.0 4309.5 4630.0 4215.2 4180.0 4479.6 True False 3927.3567832912445 3644.8938295362277 4514.510358623999 4492.0207303831685 4095.050138355128 4530.799722515576 4473.500380748887 4537.651017835267 4038.049802752854 3916.0740866367373 3928.6375985240475 0.9996739797956207 0.9277755298441324 1.1491287362112654 1.1434041999880007 1.0423588421323464 1.1532750499098607 1.1386900085743565 1.1550189866176561 1.027849910174945 0.9968020690195425 1.0 11.939813375613138 -8.947698217418193 11.224619449570184 1.0122626421677754 1.0895816120703439 0.20921952875713268 0.07011517746700878 0.7442704300312412 157.24097997132063 0.01279289474845226 0.013576260282003809 1.1279809954288688e-09 8.947698217418193 0.07731896990256848 AFNRS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AFNRSPK 7 1 Q9H8G1 Q9H8G1 ZNF430 Zinc finger protein 430 1 AFNRS(1)PK 47.823 0.016324 2105000.0 1153.5 1704.5 1041.2 1266.9 1661.2 1022.1 1308.7 1269.5 1703.9 1430.7 1452.2 True False 1348.1825996326288 1791.2517694918622 1188.8578164070639 1577.2905568733029 1416.8396805783336 1130.257943584931 1546.473849912814 1449.4555126806958 1317.9693705691814 1107.5038763356965 1091.5786613189412 1.2350759935189977 1.6409736036132427 1.0891178607051382 1.4449627981619593 1.2979730465474504 1.0354342601560698 1.4167314777335687 1.3278525534104308 1.2073975218393287 1.01458915933508 1.0 10.09220038219711 -14.719469547829707 0.12020437107248547 1.0299317384507973e-12 1.4600609648649405 0.3499282181690033 0.15731486187571567 55.377123265302004 0.4949259422387798 13.423406483617615 0.5713360050641672 1.9077894910447113e-15 14.719469547829707 1.4600609648639107 AFPDS(ph)PGLNR ddPTM_A549_MK2206_60min_R1 1 AFPDSPGLNR 10 0 P35270 P35270 SPR Sepiapterin reductase 1 AFPDS(1)PGLNR 53.568999999999996 0.020919 3295100.0 855.58 921.05 718.33 762.28 1043.0 964.19 661.68 601.95 1178.2 1262.9 1157.8 True False 999.9809870773165 967.9275108773711 820.199995447259 949.0386342200496 889.5760816537454 1066.219945822478 781.8986910753504 687.2782558945606 911.3395811987843 977.6100128778576 870.2863063455922 1.149025303266374 1.1121943477908813 0.9424484672077055 1.090490137900877 1.022164861342186 1.2251369900321978 0.8984384625774602 0.7897151212001735 1.0471721484686787 1.1233199991195162 1.0 9.765346285902261 -7.783136392732317 24.99999368651538 0.9932562612299125 1.0814400093097347 0.22935177077415914 0.10416986958578171 350.70481969659033 404092.1592821777 0.015862195943665735 0.02192648072151735 1.647644857719588e-08 7.783136392732317 0.08818374807982221 AFQLEEGEET(ph)EPDCK ddPTM_A549_MK2206_60min_R1 6 AFQLEEGEETEPDCK 15 0 P38432 P38432 COIL Coilin 1 AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK 293.38 1.9180999999999993e-123 119381200.0 19164.260000000002 19801.27 16845.699999999997 16370.19 22949.8 20760.08 18017.4 19197.72 26540.899999999998 25524.3 26137.100000000002 True False 22398.71856682758 20809.070064937594 19234.67356689249 20380.887284885757 19573.914821416223 22956.897886174196 21290.928358996836 21919.055600551746 20529.42852710815 19758.34290260377 19646.53672273742 1.140084834438275 1.0591724311824764 0.9790363481535007 1.03737811770654 0.9963035774525518 1.1684959140714921 1.0836988045000482 1.115670202330586 1.0449388010126455 1.0056908849353055 1.0 14.26198739720933 -9.672255929198453 1.1991394731225296 1.0091592458690346 1.0678598874338947 0.18087293066557297 0.05434969639365396 0.5423182358142364 1.595044473599797 0.01537373802637867 0.01074466798192438 2.1268853057377896e-10 9.672255929198453 0.0587006415648601 AFQLEEGEET(ph)EPDCK ddPTM_A549_PD325901_60min_R1 3 AFQLEEGEETEPDCK 15 0 P38432 P38432 COIL Coilin 1 AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK 202.03 1.0950000000000001e-38 222708000.0 10434.400000000001 9516.3 9900.1 9515.7 9751.3 7647.4 7596.8 9549.7 7496.1 9753.2 12046.0 True False 11493.692606600713 10318.271998457752 10571.980320137538 10103.463177277308 9066.402328158743 7585.122109887389 7885.900381128467 9359.223741905276 7181.064985389938 9137.381287508473 10564.4183658855 1.08796265052471 0.9767004335778106 1.0007157946599745 0.9563671966933169 0.8582017498886514 0.7179876683397147 0.7464585467945427 0.8859194531833362 0.6797406858269596 0.8649204311157158 1.0 13.366925720059267 -6.6456453818395484 2.529087527148897 0.8302811802228385 1.0158824390555832 0.5187105939752052 0.08662573792271097 0.2712591787768137 3.507376413448096 0.018090690112144706 0.04195207297372867 2.2612814399205842e-07 6.6456453818395484 0.1856012588327447 AFQLEEGEET(ph)EPDCKYSK ddPTM_A549_MK2206_60min_R1 2 AFQLEEGEETEPDCKYSK 18 1 P38432 P38432 COIL Coilin 1 AFQLEEGEET(1)EPDCKYSK;AFQLEEGEET(1)EPDCKYSK 148.88 2.0465e-17 44289000.0 4974.0 6699.6 5710.0 4748.3 7399.1 5452.7 5002.8 3689.1000000000004 9280.0 8975.8 10074.9 True False 5813.489597375548 7040.581023694733 6519.763860626519 5911.633713159285 6310.702191528504 6029.701094790677 5911.744002707901 4212.041222394925 7178.094817114856 6948.160546036164 7573.024276905524 0.7676575942195508 0.9296921238144562 0.8609194454201081 0.7806172933034472 0.8333133449437683 0.7962078126672166 0.7806318567782999 0.5561901122171026 0.94785049600395 0.9174882176497273 1.0 12.886653838238617 -8.971074008062613 24.999436089257657 0.9769930261305855 0.7937846945250348 0.4106000002853808 0.08847013949943555 114.5550720102798 99005.6320361002 0.015338678835088429 0.016105057139857402 1.0688727172500413e-09 8.971074008062613 -0.18320833160555072 AFQLEEGEET(ph)EPDCKYSK ddPTM_A549_PD325901_60min_R1 2 AFQLEEGEETEPDCKYSK 18 1 P38432 P38432 COIL Coilin 1 AFQLEEGEET(1)EPDCKYSK;AFQLEEGEET(1)EPDCKYSK 218.57 2.0877e-56 76696000.0 5964.700000000001 7511.700000000001 7449.700000000001 8300.7 6152.7 10434.3 8899.6 10390.2 6825.0 9343.5 8659.5 True False 6570.231953019939 8144.7373213134415 7955.281440685303 8813.41538674252 5720.555577662706 10349.326520281145 9238.279148047988 10182.959310045786 6538.168984576829 8753.54981542831 7594.436397093263 0.8651375308817738 1.0724610616833665 1.0475143940543306 1.160509473766324 0.753256104673182 1.3627510955575721 1.2164535542866484 1.3408446364687798 0.8609156285882233 1.1526266542674177 1.0 12.890727187205215 -8.838150205449324 24.99999532557895 0.9343211464446344 1.1023585866245744 0.01579819173592445 0.18598356650830528 47.510316201766045 15481.701432307891 0.030274332490299954 0.03222948023493586 1.4516094759011845e-09 8.838150205449324 0.16803744017994005 AFQQSVEQDNLFDIS(ph)TEEGSTKR ddPTM_A549_MK2206_60min_R1 2 AFQQSVEQDNLFDISTEEGSTKR 23 1 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 AFQQSVEQDNLFDIS(0.859)T(0.135)EEGS(0.003)T(0.003)KR;AFQQSVEQDNLFDIS(0.806)T(0.176)EEGS(0.009)T(0.009)KR 111.2 3.9719000000000004e-11 14068700.0 2873.1099999999997 3514.0 3320.5 2721.33 4026.3 3188.59 3331.4 3124.8599999999997 5467.7 4646.4 4934.4 True False 3358.020727204595 3692.8475904924603 3791.396829984301 3388.0559721651457 3434.036603607359 3526.0044773852583 3936.6722576599295 3567.818474482391 4229.274680122727 3596.775012935054 3709.052297488073 0.9053581502419874 0.9956310384173912 1.0222009629122768 0.9134559721521535 0.9258528400726607 0.9506483582809597 1.0613687653652149 0.961921857208287 1.1402574946131039 0.9697288483559378 1.0 11.856834894588417 -7.956963053018695 1.6595559548017653 1.0619435619385553 0.9542604150232313 0.15780766509728206 0.06097000067171504 0.30286354333598275 1.6806424454584075 0.011087789378840541 0.016010998300914004 1.1041725518055486e-08 7.956963053018695 -0.10768314691532399 AFQQSVEQDNLFDIS(ph)TEEGSTKR ddPTM_A549_PD325901_60min_R1 2 AFQQSVEQDNLFDISTEEGSTKR 23 1 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 AFQQSVEQDNLFDIS(0.803)T(0.195)EEGS(0.001)T(0.001)KR;AFQQSVEQDNLFDIS(0.898)T(0.101)EEGS(0.001)T(0.001)KR 182.54 6.155700000000001e-50 28665000.0 5193.1 5289.3 5466.0 4778.4 6618.5 6084.4 5831.4 6921.2 5959.799999999999 6426.6 6295.5 True False 5720.299689041836 5735.047873799961 5836.955629728163 5073.550915466217 6153.639392585467 6034.8506636763905 6053.317118064521 6783.151236423639 5709.330331762776 6020.82337922958 5521.193410462576 1.0360621814483 1.0387333765435809 1.0571909360514744 0.9189228737852067 1.1145487823202165 1.0930337365542098 1.096378385621047 1.2285661327439956 1.0340754085780954 1.0904931111125744 1.0 12.430764425083341 -3.9029185448318207 16.56400840269205 1.0428101924220459 0.319123122693458 0.0 0.0767779263367592 0.0 0.0 0.010286786916212673 0.0 0.00012504935476128208 3.9029185448318207 -0.7236870697285879 AFS(ph)DPFVEAEK ddPTM_A549_MK2206_60min_R1 2 AFSDPFVEAEK 11 0 P34932;A0A087WYC1;A0A087WTS8;P34932-2 P34932 HSPA4 Heat shock 70 kDa protein 4 1 AFS(1)DPFVEAEK;AFS(1)DPFVEAEK 165.7 5.942e-14 16085700.0 7139.299999999999 7536.299999999999 8371.1 7823.1 10412.7 7111.6 8470.2 7251.5 10184.5 11507.400000000001 10779.8 True False 8344.23930087319 7919.865479860079 9558.24785528733 9739.759851192304 8881.005623620285 7864.144791701981 10009.125699955312 8279.422331787366 7877.72701130455 8907.870347763606 8102.878152655227 1.0297870884481797 0.9774138683382304 1.17961145104412 1.2020123797617133 1.0960309974191176 0.9705372144988982 1.2352556105851633 1.0217878358536452 0.9722134361261625 1.0993464519572707 1.0 12.984218730810555 -8.50871814947139 24.56885462737108 0.9874112995159692 1.0983784014604754 0.10996233815248202 0.08773885572760008 507.9666641550465 881331.7861641706 0.013289915857193113 0.015743971947416273 3.0994301297690663e-09 8.50871814947139 0.11096710194450621 AFS(ph)DPFVEAEK ddPTM_A549_PD325901_60min_R1 2 AFSDPFVEAEK 11 0 P34932;A0A087WYC1;A0A087WTS8;P34932-2 P34932 HSPA4 Heat shock 70 kDa protein 4 1 AFS(1)DPFVEAEK;AFS(1)DPFVEAEK 165.58 6.2899e-14 21760000.0 12210.9 13409.9 12881.5 13339.0 15568.5 12904.599999999999 14942.1 14010.0 13853.9 14157.900000000001 14912.7 True False 13450.541578810527 14539.999335048145 13755.71605275217 14162.919734933 14475.022268409291 12799.509216106491 15510.729792130853 13730.55955936762 13271.668761234994 13263.96777779767 13078.532439394048 1.0284442571167958 1.1117454808042522 1.0517782569639362 1.0829135302882036 1.1067772577302981 0.9786655555903881 1.1859686753087637 1.0498547618393017 1.0147674307293988 1.0141786044621544 1.0 13.67491304261837 -8.670136014199352 4.0224329223833655 1.006805273188747 1.0781731150428686 0.26372603594506805 0.04954614506641863 0.1875967320072228 5.728571723259749 0.007723036754697356 0.00869671014223368 2.137292618249915e-09 8.670136014199352 0.0713678418541217 AFS(ph)EGEQEK ddPTM_A549_MK2206_60min_R1 2 AFSEGEQEK 9 0 Q7Z333-3;Q7Z333;Q7Z333-4;X6RI79 Q7Z333-3 SETX Probable helicase senataxin 1 AFS(1)EGEQEK;AFS(1)EGEQEK 118.28 0.00016774 8884400.0 3332.0 4228.4 3601.1000000000004 3688.4 5278.3 4091.6 3687.7 4050.4 5858.0 5065.4 5556.4 True False 3894.360140421258 4443.607499043345 4111.790129334876 4592.058165578569 4501.869062121728 4524.570396215732 4357.707355638028 4624.5566038297675 4531.172353303752 3921.122621926914 4176.592531161382 0.9324252034081851 1.0639312946833515 0.9844843849757864 1.0994747826888582 1.077880839113098 1.083316211111834 1.0433642552212974 1.1072558717007093 1.0848969152477443 0.938832934424793 1.0 12.028110685537134 -5.257692429488574 24.04713287803526 1.0516100593142643 0.9324251239404486 0.2996669383914068 0.05072105401659207 175.751669426378 1127849.8079753588 0.005967702304068751 0.06121003723366423 5.524685630214199e-06 5.257692429488574 -0.11918493537381569 AFS(ph)EGQITR ddPTM_A549_MK2206_60min_R1 2 AFSEGQITR 9 0 Q96GN5-5;Q96GN5-4;Q96GN5-2;Q96GN5 Q96GN5-5 CDCA7L Cell division cycle-associated 7-like protein 1 AFS(0.993)EGQIT(0.007)R;AFS(0.994)EGQIT(0.006)R 51.251999999999995 0.026432999999999998 3626800.0 1736.05 1785.97 1581.71 1418.6399999999999 2085.9 2020.8200000000002 1470.1 1825.6999999999998 2453.8999999999996 2422.4 2374.3 True False 2029.0527976525575 1876.8682445053555 1806.0202619950205 1766.2068636851689 1779.0668731750222 2234.66183108825 1737.1981407173755 2084.4985659717563 1898.0955680730754 1875.1781575701334 1784.6957826536031 1.1369180211966592 1.0516460355583428 1.0119485234114862 0.9896402965994889 0.9968460117778665 1.2521247894504506 0.9733861409894716 1.1679853710823402 1.063540120687046 1.0506990467484576 1.0 10.801462459610311 -10.325015990728456 1.0059606200910514 1.0046300433679385 1.0685575566815273 0.03265464514669458 0.08223416921225088 0.9251975242914187 1.831164287751012 0.03482730487753925 0.014261390812590412 4.7313383784671385e-11 10.325015990728456 0.06392751331358881 AFS(ph)FSK ddPTM_A549_MK2206_60min_R1 1 AFSFSK 6 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C103 Q9H8V3-2 ECT2 Protein ECT2 1 AFS(0.995)FS(0.005)K 85.064 0.040138 43324000.0 3524.2 3629.4 3697.6 3107.6 4488.8 3256.8 2952.9 3220.6 4779.1 4286.9 4323.9 True False 4118.99880158241 3814.1209575792072 4221.975280394502 3868.962139505463 3828.5034662774056 3601.4324143111235 3489.403707043286 3677.129912673848 3696.641480654484 3318.4863126186456 3250.1562964309105 1.2673232995304258 1.1735192432953463 1.2990068462340638 1.1903926416566737 1.1779444177751066 1.1080797616612958 1.0736110478364072 1.1313701795546909 1.1373734502288002 1.0210236093146567 1.0 11.666293382084397 -2.0000000011586407 0.026155110862348573 0.19474578480297974 2.50498317038666 0.7711033655442526 0.04223357709804391 495.3400921145466 0.968380304298773 28.640948027865036 63.32995500859967 0.009999999973321311 2.0000000011586407 2.3102373855836804 AFS(ph)FSK ddPTM_A549_PD325901_60min_R1 1 AFSFSK 6 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C103 Q9H8V3-2 ECT2 Protein ECT2 1 AFS(0.5)FS(0.5)K 81.215 0.0424 81056000.0 5692.4 6040.6 6110.4 5531.8 6299.7 5292.6 6222.8 5876.4 5929.9 6058.6 6278.1 True False 6270.288257476602 6549.662561487545 6525.0884888201535 5873.486722370672 5857.230804785172 5249.49882035594 6459.612059246821 5759.190592053384 5680.686924782725 5676.058962032859 5505.933500154888 1.1388238265682307 1.189564414699759 1.1851012164670343 1.066755841167614 1.0638034049304086 0.9534257579043164 1.1732092403704304 1.0459971214493184 1.031739109203357 1.0308985682215714 1.0 12.426771470044866 -4.343563090530933 0.23429151822819835 0.9994120665298509 1.4451732777908464 0.4338805643138335 0.05737080635421205 9.703988202151455 0.29426069233340535 0.03478730686358592 1.3476184386311794 4.533534337451035e-05 4.343563090530933 0.44576121126099544 AFS(ph)FSLPRPGR ddPTM_A549_PD325901_60min_R1 1 AFSFSLPRPGR 11 1 Q7LDG7;Q7LDG7-4;Q7LDG7-2 Q7LDG7 RASGRP2 RAS guanyl-releasing protein 2 1 AFS(0.942)FS(0.058)LPRPGR 56.122 0.0043904 2152800.0 477.62 726.0 434.32 408.22 560.51 617.84 797.93 488.17 626.38 510.68 712.55 True False 526.1076307947397 787.1825678972216 463.7955669783272 433.4348222651139 521.1417112545258 612.8085158841994 828.2956627940497 478.43306638804376 600.0554268951256 478.43557764680577 624.9108672266077 0.8418922735807705 1.2596717534946793 0.7421787510860229 0.6935946308450738 0.8339456690317842 0.9806334759449468 1.3254620878495458 0.7656020906011104 0.9602256231487987 0.7656061091882301 1.0 9.28750661862082 -7.320604193197332 8.293926088725762 0.9915756612131051 0.8783691403794718 0.04404763362874475 0.1945021148271458 0.7284101668921643 95.82576633062922 0.02688479622475437 0.04306476274158909 4.779646821157585e-08 7.320604193197332 -0.11320652083363336 AFS(ph)GSGNRLDGK ddPTM_A549_MK2206_60min_R1 1 AFSGSGNRLDGK 12 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 AFS(0.5)GS(0.5)GNRLDGK 45.863 0.012347 1557300.0 1232.8 1408.6 1264.4 1226.2 1831.6 1488.3 1460.0 1326.5 1923.0 2061.2 2462.9 True False 1440.8665009337703 1480.2917233829476 1443.71093264031 1526.6190550462095 1562.1740663058483 1645.790918146417 1725.2631014538922 1514.535437235875 1487.4435703999861 1595.573488434428 1851.2939574180002 0.7783023842109585 0.7995984200410348 0.7798388402098247 0.8246227180341393 0.843828210018366 0.8889949170696811 0.9319228286468977 0.8180955980368443 0.803461581257751 0.861869333090556 1.0 10.854318276163278 -14.99999999999145 0.2581572324168585 2.146801345247588 0.8125451500040355 0.151784197099877 0.06039800056131298 20.668988634916246 0.26804622287584706 12.16372765498346 0.0234410444332588 1.0000000000196861e-15 14.99999999999145 -1.3342561952435523 AFS(ph)MDEPVAAK ddPTM_A549_PD325901_60min_R1 2 AFSMDEPVAAK 11 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 AFS(1)MDEPVAAK;AFS(1)MDEPVAAK 164.04 1.1029000000000002e-13 7595400.0 5254.9 5830.200000000001 5468.3 5830.3 6087.7 6867.5 5825.4 5769.3 6535.5 6702.2 7271.799999999999 True False 5788.373579547081 6321.531415088679 5839.411721559185 6190.424389427982 5660.12095342488 6811.573356912364 6047.0887847811955 5654.226785571709 6260.835662813457 6279.021948195392 6377.414699738183 0.9076363780741302 0.9912373136638271 0.91563932980537 0.9706792926108634 0.8875259364358491 1.068077532607689 0.9482037893865443 0.8866017111610817 0.9817200162740691 0.9845716867766446 1.0 12.63875598204331 AFS(ph)PQPPK ddPTM_A549_MK2206_60min_R1 1 AFSPQPPK 8 0 H0Y9Z7;A0A1B0GUA8;Q9H1H9;H0Y307;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 H0Y9Z7;Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 AFS(1)PQPPK 76.465 0.004647999999999999 5799700.0 2158.1 2717.7 2890.6 2446.1 3128.0 2632.4 2778.1 2574.0 3769.7 3857.4 4100.3 True False 2522.334519520741 2856.019321764759 3300.5305456264477 3045.3946098096026 2667.8753436365455 2910.9588207543025 3282.8448096911347 2938.872382544395 2915.8689689739076 2986.010660919352 3082.0823474769686 0.818386478734274 0.9266525030074982 1.0708768207729114 0.9880964446983712 0.8656080671629367 0.9444779511284798 1.0651385782662532 0.9535346727352022 0.9460710780037641 0.9688289682992208 1.0 11.589689693143452 -7.559415915104794 24.999871623524523 0.9793141323430024 0.9402284508804453 0.11929313335752667 0.06717120331305754 387.16410405213185 264908.3767579985 0.010555701707798222 0.015656655682409544 2.7579353717682693e-08 7.559415915104794 -0.03908568146255709 AFS(ph)PQPPK ddPTM_A549_PD325901_60min_R1 1 AFSPQPPK 8 0 H0Y9Z7;A0A1B0GUA8;Q9H1H9;H0Y307;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 H0Y9Z7;Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 AFS(1)PQPPK 82.749 0.0034783 9367200.0 4266.1 4796.1 4525.1 4584.7 4919.0 5071.5 4269.3 4989.9 4160.8 5047.6 5285.5 True False 4699.1913314631665 5200.284178914411 4832.200497636831 4867.886506390834 4573.506409628756 5030.199385450466 4431.7705477506 4890.372529999179 3985.936045571758 4728.8936745711935 4635.417007545063 1.0137580553840784 1.1218589763229316 1.0424521655271712 1.0501507196585294 0.9866440068249448 1.0851665291952841 0.9560672838143821 1.0550016367543902 0.8598872634509159 1.020165751403591 1.0 12.178483415887323 -8.287840014546086 1.6220654055105654 0.9365399960485915 1.047464765466945 0.14081376624332553 0.06152299013676689 0.29925972785493843 1.5316269270312914 0.011646750779746777 0.01492800695816891 5.154184795358982e-09 8.287840014546086 0.11092476941835339 AFS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 AFSPVR 6 0 Q14602;Q02363 Q14602 ID2B;ID2 Putative DNA-binding protein inhibitor ID-2B;DNA-binding protein inhibitor ID-2 1 AFS(1)PVR;AFS(1)PVR 99.375 0.033752 90456000.0 6609.5 7187.9 6504.299999999999 6429.2 10181.2 8244.3 6796.4 8013.4 10848.1 11056.0 10112.4 True False 7725.02201323958 7553.733407996801 7426.707544426104 8004.354288617758 8683.55896695409 9116.706353876569 8031.217905973453 9149.323990008259 8391.022670856004 8558.441921274523 7601.211991958169 1.0162881947526785 0.9937538139955051 0.9770425495675314 1.0530365811512823 1.1423913681319515 1.1993753579720896 1.056570704049593 1.2036664678853768 1.1039058876049541 1.1259312239060129 1.0 12.892013755242093 -6.425530463653574 4.970864452761798 1.0801133265496394 0.9964756563353849 0.33424681338456896 0.06314742967155286 0.28960099039269066 11.402761761031634 0.010674160287787575 0.02522260608206192 3.7537862255705444e-07 6.425530463653574 -0.0836376702142545 AFS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 AFSPVR 6 0 Q14602;Q02363 Q14602 ID2B;ID2 Putative DNA-binding protein inhibitor ID-2B;DNA-binding protein inhibitor ID-2 1 AFS(1)PVR;AFS(1)PVR 91.9 0.036943000000000004 199192000.0 6822.4 6518.0 5499.1 5577.0 7517.4 6079.0 6364.599999999999 5795.200000000001 5668.7 6069.900000000001 6709.0 True False 7515.005025614568 7067.294734922991 5872.301994774631 5921.478623714024 6989.4037576221235 6029.494639486023 6606.808335842758 5679.610189753552 5430.46425243526 5686.645478104389 5883.835531855044 1.2772289410416697 1.201137369775329 0.9980397927477798 1.0063977131337511 1.1878992401778639 1.0247558088329256 1.1228744073612433 0.9652904400546518 0.9229463031443971 0.9664861377101605 1.0 12.522541204828363 -2.000000000000074 0.3075400404612399 0.9666542139423769 3.651785846360877 0.5534987212211246 0.07415077258366425 26.060080578835215 0.32590244680925273 0.025266647261063955 39.48308015807266 0.009999999999998292 2.000000000000074 2.6851316324185004 AFS(ph)SPQEEEEAGFTGR ddPTM_A549_MK2206_60min_R1 2 AFSSPQEEEEAGFTGR 16 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 AFS(0.5)S(0.5)PQEEEEAGFTGR;AFS(0.5)S(0.5)PQEEEEAGFTGR 197.17 3.2303e-39 19378200.0 3945.6000000000004 4342.5 4132.799999999999 3958.0 5596.1 4361.9 3909.9 4977.5 5190.3 5467.3 6254.4 True False 4611.520819341572 4563.514701682845 4718.893184447859 4927.71017768137 4772.921103108846 4823.473362805116 4620.278219434643 5683.075867954443 4014.705337205952 4232.233132795242 4701.259867341402 0.9809117022815039 0.9707003719119119 1.0037507641789707 1.0481680053283307 1.0152429854527418 1.0259959029945789 0.9827744795667815 1.208841040129157 0.8539637140876235 0.9002338207669857 1.0 12.198831713962674 AFS(ph)SPQEEEEAGFTGR ddPTM_A549_PD325901_60min_R1 1 AFSSPQEEEEAGFTGR 16 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 AFS(0.591)S(0.409)PQEEEEAGFTGR 215.15 4.380199999999999e-86 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AFSS(ph)PQEEEEAGFTGR ddPTM_A549_PD325901_60min_R1 1 AFSSPQEEEEAGFTGR 16 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 AFS(0.025)S(0.975)PQEEEEAGFTGR 226.79 6.230600000000001e-55 16304000.0 4871.7 5552.6 4586.4 4893.9 5813.6 5029.1 5235.1 5496.6 4994.2 5760.0 5298.3 True False 5366.271397644012 6020.537088851398 4897.660684263675 5196.185088146684 5405.272791831211 4988.144676992791 5434.324595256643 5386.9660010007165 4784.311141798328 5396.312616992247 4646.642688690946 1.1548706791474428 1.2956746391333795 1.0540213681985189 1.118266549909943 1.163264135842988 1.0734943509069454 1.1695163496179224 1.1593243470412689 1.0296275100821592 1.1613358242771403 1.0 12.181972995343973 -8.80996568023593 4.991595250094175 1.0130380981796467 1.1481250107396415 0.11946933857492215 0.07400699690399146 0.11322857244997202 6.061263245637427 0.010210701339931228 0.010922699833724165 1.5489390177075047e-09 8.80996568023593 0.13508691255999472 AFSTVPLT(ph)PVPR ddPTM_A549_MK2206_60min_R1 2 AFSTVPLTPVPR 12 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 AFST(0.001)VPLT(0.999)PVPR;AFSTVPLT(1)PVPR 128.85 8.8934e-08 5149400.0 1941.4299999999998 2509.6 2100.4700000000003 1424.1100000000001 3361.8 2247.3 2069.3999999999996 1779.38 3120.4 3332.1 3111.0 True False 2269.0959205936497 2637.3279206317247 2398.3482305306798 1773.0170139307277 2867.2836733495315 2485.1077943629925 2445.3831932525227 2031.6125641227077 2413.634382254871 2579.376295756044 2338.4528407679554 0.9703406803998114 1.1278088976836573 1.02561325536206 0.7582008852265172 1.226145605060783 1.0627145226272234 1.0457269655476358 0.8687849199710692 1.0321501208731778 1.1030268606609865 1.0 11.191338619095127 -5.805728620935403 0.006438489725507461 0.6750115183411347 1.368532557765068 0.0 0.1204449093586683 115873.68736472014 129.8333906024171 6705.7818622859595 7287.7529118823395 1.5641247172476044e-06 5.805728620935403 0.6935210394239333 AFSTVPLT(ph)PVPR ddPTM_A549_PD325901_60min_R1 2 AFSTVPLTPVPR 12 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 AFST(0.007)VPLT(0.993)PVPR;AFSTVPLT(1)PVPR 134.08 4.9231e-08 5682000.0 2927.6 3887.4 3825.8 4180.6 3863.4 3387.0 3363.9 4146.1 4371.1 3914.0 4140.6 True False 3224.8077968147877 4215.004840831489 4085.4417944043166 4438.826167168523 3592.04811200645 3359.4173949562714 3491.9150552967103 4063.4027829474708 4187.397867909711 3666.869372032581 3631.332449425993 0.8880508303018455 1.1607322930451485 1.1250530903746103 1.2223684361012364 0.9891818394579233 0.925119757483867 0.9616070970997654 1.1189839651254665 1.153129856940423 1.009786193663487 1.0 11.82628329995106 -11.247835407642137 1.7492834532995079 0.999962421436849 1.0777942576044361 0.019493686343580174 0.10361750645155537 0.9167087569730271 5.064513938737093 0.07991509501685562 0.016320935694850366 5.651511196720557e-12 11.247835407642137 0.07783183616758715 AFT(ph)NT(ph)ATATEEDVK ddPTM_A549_PD325901_60min_R1 2 AFTNTATATEEDVK 14 0 C9JKF1;Q5K651 C9JKF1 SAMD9 Sterile alpha motif domain-containing protein 9 2 AFT(0.5)NT(0.5)AT(0.5)AT(0.5)EEDVK;AFT(0.5)NT(0.5)AT(0.5)AT(0.5)EEDVK 46.606 0.027392000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AFTGREFDELNPS(ph)AQR ddPTM_A549_PD325901_60min_R1 2 AFTGREFDELNPSAQR 16 1 P16615-4;P16615-5;P16615-2;P16615;P16615-3;H7C5W9 P16615-4 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 1 AFTGREFDELNPS(1)AQR;AFTGREFDELNPS(1)AQR 72.883 0.00020131 12236000.0 4416.4 4612.1 4828.9 5825.5 5257.7 5392.3 5799.5 6565.6 5661.299999999999 6436.0 6690.299999999999 True False 4864.7496768181545 5000.777853166359 5156.618192534633 6185.327904329574 4888.417290080322 5348.386896611367 6020.20314610817 6434.643957386438 5423.375248701069 6029.629861625367 5867.435513305973 0.8291100372191631 0.8522936199001699 0.8788538333042822 1.0541791026595344 0.8331437608465461 0.911537397297759 1.026036525234194 1.0966705885039842 0.9243178278486608 1.0276431411903166 1.0 12.518514365399467 -7.613186447517319 7.028088638847906 0.9794690286404242 0.8937306939435234 0.37562245367850033 0.07213362976576028 0.25494835545547145 16.896796281608243 0.011415069512895466 0.016962120908725915 2.4367644633226167e-08 7.613186447517319 -0.08573833469690073 AFVAIGDY(ph)NGHVGLGVK ddPTM_A549_PD325901_60min_R1 1 AFVAIGDYNGHVGLGVK 17 0 H0YEN5;P15880;I3L404;E9PM36;E9PMM9;E9PPT0 H0YEN5 RPS2 40S ribosomal protein S2 1 AFVAIGDY(1)NGHVGLGVK 80.632 0.00010896 1948700.0 1282.8 1511.3 1633.8 1553.8 1908.8 1700.0 1541.9 1559.0 1648.2 1512.5 1712.7 True False 1413.0289116525516 1638.6625549078108 1744.6794928375166 1649.7746970641645 1774.7324730025146 1686.1557636332038 1600.5778482600554 1527.90452198816 1578.931885769894 1417.0004918751358 1502.0487576998257 0.9407343832276155 1.09095163955742 1.1615331951735344 1.0983496298685802 1.1815411875978414 1.122570592325719 1.0655964661966852 1.0172136651062704 1.0511855075781986 0.9433784919506014 1.0 10.552715929305247 -8.023394765510863 3.596820009068872 1.0244986916867587 1.1052016040215715 0.311072703873263 0.06369289537437553 0.23358966747587775 6.414740683608031 0.00958469781504598 0.012953114053688274 9.475567604616417e-09 8.023394765510863 0.08070291233481286 AFVDRT(ph)PPPAAVAQR ddPTM_A549_MK2206_60min_R1 2 AFVDRTPPPAAVAQR 15 1 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 AFVDRT(1)PPPAAVAQR;AFVDRT(1)PPPAAVAQR 51.348 0.0085705 43875000.0 4880.799999999999 5818.4 5191.799999999999 4964.3 10503.7 7743.7 7304.799999999999 7751.1 11190.0 8937.4 8742.7 True False 5704.55971589678 6114.531707604252 5928.0753085115175 6180.553722855893 8958.619644167251 8563.133194147955 8631.987605137252 8849.842161748205 8655.48286675811 6918.435132706128 6571.646303755065 0.868056412688731 0.9304413878924653 0.9020685281136009 0.9404878834279776 1.3632230388066169 1.3030423121303631 1.31351981012808 1.3466704920944041 1.3170950575675888 1.0527704646479386 1.0 12.682039118944259 -6.658205761276884 7.289746696240057 1.204590383987239 0.9069105061981265 0.6488703150694932 0.11556090314638902 0.1587388232427077 9.985483889823422 0.021731788591082164 0.04537734155408881 2.1968188111109405e-07 6.658205761276884 -0.2976798777891124 AFVDRT(ph)PPPAAVAQR ddPTM_A549_PD325901_60min_R1 2 AFVDRTPPPAAVAQR 15 1 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 AFVDRT(1)PPPAAVAQR;AFVDRT(1)PPPAAVAQR 73.138 0.00034273 34869000.0 6915.9 7612.8 7115.1 7259.5 8551.6 8192.1 7302.8 7693.299999999999 7655.9 8371.400000000001 9641.6 True False 7617.99707678351 8254.357373123921 7597.973472572056 7707.902827479286 7950.9651174184355 8125.386253682094 7580.7120502455 7539.851096222902 7334.149147109408 7842.828375327938 8455.744323138106 0.9009256649278996 0.9761834154016324 0.8985576174271418 0.9115581707440653 0.9403033977342001 0.9609309296933178 0.8965162332902867 0.891683902455639 0.8673570139816562 0.9275148438283549 1.0 13.045716039183375 -11.017010887793916 1.326689130324329 0.9996246801941727 0.9123280691587832 0.09572317066569591 0.03680571379824112 0.30667155872767377 0.9680838625140482 0.023670150248666418 0.005455304123195906 9.615881709968306e-12 11.017010887793916 -0.08729661103538955 AFVEDS(ph)EDEDGAGEGGSSLLQK ddPTM_A549_MK2206_60min_R1 2 AFVEDSEDEDGAGEGGSSLLQK 22 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1 A0A494C108 KRI1 Protein KRI1 homolog 1 AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK 164.27 1.2548e-33 33304000.0 2835.1000000000004 3181.5 3146.9 3040.3 3862.6 3374.3999999999996 3123.7 3134.4 4336.0 4059.3 4554.8 True False 3313.5955684598734 3343.4247607147886 3593.1777395806625 3785.1736364842513 3294.4166567552816 3731.4767682545626 3691.235856172278 3578.710798697417 3353.9029231691807 3142.3013106937096 3423.7174539151006 0.9678355802026536 0.9765480959567807 1.049495990234761 1.105574185789139 0.962233800276959 1.0898903950112857 1.0781368222869163 1.0452704835806699 0.9796085595012856 0.9178039230721025 1.0 11.741347931303304 -8.760135973323775 24.99994659401366 0.9903707073125627 1.0362278471655264 0.2256717588228515 0.05124942564218228 46.29993827671068 888056.6109596818 0.007983629080968906 0.008809706431724115 1.7372568255955228e-09 8.760135973323775 0.04585713985296369 AFVEDS(ph)EDEDGAGEGGSSLLQK ddPTM_A549_PD325901_60min_R1 2 AFVEDSEDEDGAGEGGSSLLQK 22 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1 A0A494C108 KRI1 Protein KRI1 homolog 1 AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK 161.04 2.5356999999999996e-33 52620000.0 4713.4 4452.1 4911.4 5231.6 5496.3 4953.299999999999 5265.6 5807.7 5053.5 5753.1 5948.3 True False 5191.9008981783145 4827.294091646308 5244.717138647439 5554.744050174341 5110.258849205635 4912.961967061383 5465.985289446884 5691.860867447485 4841.1189690196325 5389.8482841698105 5216.696809380438 0.9952468176495255 0.9253545429295559 1.0053712780885822 1.0648010135812458 0.9795966750485842 0.9417764049900519 1.0477866529674844 1.0910852356250853 0.9280046638544418 1.033191784210656 1.0 12.348920872079102 AFVESQQKS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 AFVESQQKSPGK 12 1 H3BPE1;H3BQK9;E9PNZ4;A0A5F9ZGX0;A0A669KBB0;E9PLY5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AFVES(0.001)QQKS(0.999)PGK;AFVES(0.023)QQKS(0.977)PGK 76.58800000000001 0.00031902 20901600.0 4044.1000000000004 4763.7 4948.0 4968.7 5640.9 3480.3 3793.1000000000004 3732.3 6132.1 6002.4 6113.5 True False 4726.645211247783 5006.151982592182 5649.700802518393 6186.0317230534165 4811.1310824550455 3848.5830359638303 4482.257171318329 4261.364954689376 4743.189140951508 4646.453671152149 4595.349225983573 1.028571492351837 1.0893953291483918 1.2294388358066846 1.3461505141057868 1.0469565741057008 0.8374952254341654 0.9753898889717052 0.9273212426586116 1.0321716386933122 1.0111209056494803 1.0 12.165958788711736 -6.98534552880653 24.81788802809968 0.9917374243536529 1.1745381549656684 0.524362258728571 0.09110768426184535 154.36493291939524 261420.99362919666 0.013635171619728718 0.02576063138252455 1.0343189252920528e-07 6.98534552880653 0.18280073061201552 AFVESQQKS(ph)PGK ddPTM_A549_PD325901_60min_R1 4 AFVESQQKSPGK 12 1 H3BPE1;H3BQK9;E9PNZ4;A0A5F9ZGX0;A0A669KBB0;E9PLY5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AFVESQQKS(1)PGK;AFVES(0.004)QQKS(0.996)PGK;AFVES(0.089)QQKS(0.911)PGK;AFVES(0.067)QQKS(0.933)PGK 108.71 3.0675e-05 49450100.0 13309.3 13575.3 13515.900000000001 13162.999999999998 18066.0 15791.199999999999 15595.3 17357.3 16644.9 14890.2 16639.8 True False 14660.450338211189 14719.338173519498 14433.170251709278 13976.048614657997 16797.106484316537 15662.601702755666 16188.787675575602 17011.095034961563 15945.372737198946 13950.03023082258 14593.210088383003 1.0046076394035959 1.008642929442707 0.9890332671355753 0.9577089982267644 1.1510220426202153 1.073280080797573 1.1093369846338859 1.165685612139808 1.0926569713330132 0.9559260879775568 1.0 13.833009649315896 -6.734279224293246 24.999957016024194 1.0675789185273132 0.9912610478890753 0.3358000541793339 0.05849404396972169 236.36129900592283 217561.1026054669 0.008604864667416372 0.017908850599659236 1.8438295704724688e-07 6.734279224293246 -0.07631787063823792 AFVESQQKS(ph)PGKR ddPTM_A549_MK2206_60min_R1 1 AFVESQQKSPGKR 13 2 H3BPE1;H3BQK9;E9PNZ4;A0A5F9ZGX0;A0A669KBB0;E9PLY5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AFVES(0.001)QQKS(0.999)PGKR 60.158 0.0016963000000000002 25038000.0 5711.8 7685.4 7370.9 6849.6 8417.4 5851.1 5621.5 5213.6 8834.6 9920.8 9763.0 True False 6675.812199897401 8076.554033002494 8416.20445539264 8527.752307490227 7179.211610462353 6470.259518354156 6642.853784125377 5952.6437659803705 6833.577205957207 7679.684389705159 7338.577654907605 0.9096874781222781 1.1005612276380796 1.1468440958397956 1.1620442963886024 0.9782837966784097 0.8816775978417604 0.9051963604531773 0.811144072584637 0.9311855140467603 1.046481314341539 1.0 12.84128475521611 -6.9266012554932255 6.868147219493859 0.9426465073612927 1.0853907710589892 0.40749505069084346 0.08388843700694253 0.1756891670014073 13.4723335214514 0.012164445139183539 0.023100832347182427 1.1841282560311371e-07 6.9266012554932255 0.14274426369769644 AFVESQQKS(ph)PGKR ddPTM_A549_PD325901_60min_R1 2 AFVESQQKSPGKR 13 2 H3BPE1;H3BQK9;E9PNZ4;A0A5F9ZGX0;A0A669KBB0;E9PLY5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AFVESQQKS(1)PGKR;AFVESQQKS(1)PGKR 131.24 8.1052e-09 98902000.0 7839.7 8736.6 9256.1 8602.5 10742.6 11771.0 9797.7 11268.5 10054.8 9692.6 11009.1 True False 8635.58057271789 9472.863943100367 9884.274607450936 9133.856887304984 9988.076835958096 11675.14087866261 10170.556835007163 11043.740927532759 9632.23172250887 9080.607581850532 9655.05049243484 0.8944107106932533 0.9811304405422607 1.0237413688510177 0.9460185520999362 1.03449244970642 1.209226289164474 1.0533924025541082 1.1438304684357703 0.9976365975564965 0.9405033758203118 1.0 13.237068088632924 -4.723277122592647 0.9802380397368078 1.0282334494483856 0.645482458564836 0.24118533736201175 0.07541864470753593 5.955555278754543 2.1121743346266966 0.011531173293782424 3.1024592558324904 1.8911365024732245e-05 4.723277122592647 -0.3827509908835496 AGAAAGDS(ph)DEESR ddPTM_A549_MK2206_60min_R1 4 AGAAAGDSDEESR 13 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(1)DEESR;AGAAAGDS(0.995)DEES(0.005)R;AGAAAGDS(1)DEESR;AGAAAGDS(1)DEESR 171.73 1.0147e-21 65373000.0 3684.51 3847.33 2646.7000000000003 3099.23 3786.31 2924.5099999999998 1883.54 2435.0 2698.7 4206.46 4668.18 True False 4306.365210379208 4043.1426637249165 3022.041858129635 3858.5414891297196 3229.3488146945274 3233.9797070673753 2225.7548370633326 2780.1687068747506 2087.4487589383466 3256.21776448665 3508.94207078629 1.2272545751700683 1.1522397868537402 0.8612401678812698 1.099631003103192 0.9203197857213098 0.9216395260531329 0.6343093707912315 0.7923096622258473 0.5948940497813882 0.9279770651092542 1.0 11.776820415109718 -6.016583764633352 0.673515689144638 0.7968018035613288 1.275932960933456 0.49174405658696274 0.1349478258662945 1.1334888889459418 0.6059010081005368 0.029418494853820143 0.3409433493341572 9.62534346067897e-07 6.016583764633352 0.4791311573721272 AGAAAGDS(ph)DEESR ddPTM_A549_PD325901_60min_R1 4 AGAAAGDSDEESR 13 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(1)DEESR;AGAAAGDS(0.867)DEES(0.133)R;AGAAAGDS(1)DEESR;AGAAAGDS(1)DEESR 184.21 3.6616e-25 112110000.0 3237.9199999999996 3760.83 3638.7200000000003 3488.98 4264.15 3524.31 2972.55 3414.0399999999995 3864.26 4061.08 3885.0 True False 3566.6312547692783 4077.7683427340335 3885.6654206008902 3704.486370551506 3964.6508145188964 3495.6091878412567 3085.6720168917745 3345.9442939374326 3701.8585905261307 3804.662715731753 3407.1696290440955 1.0468017865520598 1.1968198788735034 1.1404379128875481 1.0872620896162497 1.1636200266410586 1.0259568992524666 0.9056408552683304 0.9820304411659597 1.0864908394844761 1.1166637209076018 1.0 11.734358059771347 -7.2744032599687705 23.626878482667024 1.024695639455994 1.1294080508085629 0.4197583024073396 0.06275432007509875 289.33712339793857 527321.0536948637 0.009374491268464775 0.015049682823903817 5.3161440457227885e-08 7.2744032599687705 0.10471241135256881 AGAAAGDS(ph)DEESRADDK ddPTM_A549_MK2206_60min_R1 6 AGAAAGDSDEESRADDK 17 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(1)DEESRADDK;AGAAAGDS(1)DEESRADDK;AGAAAGDS(1)DEESRADDK;AGAAAGDS(0.999)DEES(0.001)RADDK;AGAAAGDS(1)DEESRADDK;AGAAAGDS(0.999)DEES(0.001)RADDK 174.2 1.48e-30 111482600.0 10790.02 9642.36 10505.33 9208.439999999999 11560.35 10088.66 9702.5 11475.25 12121.64 13998.810000000001 14976.6 True False 12611.11158533858 10133.114938150515 11995.14376146333 11464.508213382584 9859.837828903046 11156.235304889487 11465.31865880575 13101.901828979251 9376.107894281478 10836.469098404219 11257.496886867688 1.1202411790182183 0.9001214959225253 1.0655249459101461 1.0183887527214315 0.8758463740198706 0.9910049646919 1.0184607443401112 1.163837926019161 0.8328767921063408 0.9626002305224162 1.0 13.45859845826841 -8.792897599973937 24.99960176371776 0.9210807450897323 1.0109877750722043 0.15634534966874236 0.08794130510141415 268.236197868786 213164.01948475908 0.016494504423271324 0.017560458487793935 1.611025445669611e-09 8.792897599973937 0.08990702998247202 AGAAAGDS(ph)DEESRADDK ddPTM_A549_PD325901_60min_R1 4 AGAAAGDSDEESRADDK 17 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(1)DEESRADDK;AGAAAGDS(0.564)DEES(0.436)RADDK;AGAAAGDS(0.997)DEES(0.003)RADDK;AGAAAGDS(1)DEESRADDK 135.04 7.1111e-13 53069400.0 2756.82 2556.19 3189.2400000000002 2658.1000000000004 3464.3 2414.2799999999997 2323.99 2376.2999999999997 3315.76 2871.7 3107.64 True False 3036.690336936382 2771.609102249586 3405.6810048580755 2822.2848000169015 3220.9795191861963 2394.6189041319817 2412.4307111861235 2328.9028323287134 3176.4101380660004 2690.3803719126117 2725.419980953048 1.1142100513530713 1.0169475242785835 1.2495986044936636 1.035541244924014 1.1818286875771187 0.8786238160970007 0.8851592518018175 0.8545115426629855 1.1654754717675646 0.9871434093514706 1.0 11.412262847671501 AGAAAGDS(ph)DEESRADDKGVMDYYLK ddPTM_A549_MK2206_60min_R1 5 AGAAAGDSDEESRADDKGVMDYYLK 25 2 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(0.961)DEES(0.039)RADDKGVMDYYLK;AGAAAGDS(1)DEESRADDKGVMDYYLK;AGAAAGDS(0.996)DEES(0.004)RADDKGVMDYYLK;AGAAAGDS(0.999)DEES(0.001)RADDKGVMDYYLK;AGAAAGDS(1)DEESRADDKGVMDYYLK 190.77 4.2992e-58 141086000.0 17619.0 19479.699999999997 19162.9 16088.800000000001 24716.3 18388.4 17871.2 17486.5 28515.699999999997 28244.399999999998 28343.6 True False 20592.65645680736 20471.13352547409 21880.48737036775 20030.55672225369 21080.565011484618 20334.248282767974 21118.165711440273 19965.264925160296 22056.939480215748 21863.97042341226 21305.101876435438 0.9665598679715266 0.9608559322645738 1.0270069346426698 0.94017652853416 0.9894608875257636 0.9544309339942054 0.9912257558739053 0.9371119199971031 1.0352890874749527 1.0262316768170425 1.0 14.378911329740859 -8.774868421372826 24.961141135751575 1.0166642915181152 0.9721214388387818 0.4280508672089398 0.025425669770380785 163.45248570148127 303815.01319342124 0.004303587653668407 0.004594390345929946 1.6793127240880535e-09 8.774868421372826 -0.044542852679333444 AGAAAGDS(ph)DEESRADDKGVMDYYLK ddPTM_A549_PD325901_60min_R1 9 AGAAAGDSDEESRADDKGVMDYYLK 25 2 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(0.995)DEES(0.005)RADDKGVMDYYLK;AGAAAGDS(0.975)DEES(0.025)RADDKGVMDYYLK;AGAAAGDS(0.988)DEES(0.012)RADDKGVMDYYLK;AGAAAGDS(0.998)DEES(0.002)RADDKGVMDYYLK;AGAAAGDS(0.892)DEES(0.108)RADDKGVMDYYLK;AGAAAGDS(1)DEESRADDKGVMDYYLK;AGAAAGDS(1)DEESRADDKGVMDYYLK;AGAAAGDS(1)DEESRADDKGVMDYYLK;AGAAAGDS(0.939)DEES(0.06)RADDKGVMDYYLK 209.39 3.6714e-81 375890900.0 53205.759999999995 55929.1 59411.700000000004 60509.0 64151.200000000004 68520.59999999999 64150.7 65019.8 68664.0 71201.9 74345.0 True False 58607.16958718962 60642.44154019353 63443.73523357495 64246.50350409033 59645.4410216256 67962.59095153246 66591.98999310994 63722.929081953676 65778.29086549208 66706.1998826078 65201.036311784585 0.8988686821929673 0.9300840135455467 0.9730479578605714 0.9853601589531525 0.9147928375924471 1.0423544593147631 1.021333306340009 0.9773300040391574 1.008853456729539 1.0230849639202924 1.0 15.992607274527135 -4.131519429848665 0.4337894344169036 1.0050657775297909 0.6471067385639006 0.5785164745432051 0.029095358118131746 5.824545994756987 0.3520315400103122 0.0057987491593564765 1.338935312345771 7.387212126947145e-05 4.131519429848665 -0.3579590389658903 AGAAAGDSDEES(ph)RADDK ddPTM_A549_PD325901_60min_R1 1 AGAAAGDSDEESRADDK 17 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(0.486)DEES(0.514)RADDK 72.417 0.0006519999999999999 1883600.0 484.82 344.05 509.02 605.25 654.07 602.37 527.12 476.75 428.14 531.26 633.7 True False 534.0385694943799 373.0443009435801 543.5651581859181 642.6349178775175 608.1303796190039 597.4644984351368 547.1798400511319 467.2408472468599 410.14676469695587 497.7161529346012 555.7589173552751 0.9609176799820734 0.6712340356477039 0.9780592649284258 1.1563195799640331 1.094234137551858 1.0750425765156024 0.9845633114715118 0.840725776331846 0.7379940328240653 0.8955612539752207 1.0 9.118315381782763 -8.248709894333006 20.356467023602963 0.8701517596007546 0.9898462971726023 0.16599655901002397 0.1294126001967785 111.50308287963888 178308.8640022264 0.025039142924932836 0.032144109127279746 5.640142876053733e-09 8.248709894333006 0.11969453757184767 AGAAAGDSDEES(ph)RADDKGVMDYYLK ddPTM_A549_PD325901_60min_R1 1 AGAAAGDSDEESRADDKGVMDYYLK 25 2 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(0.445)DEES(0.553)RADDKGVMDY(0.001)YLK 59.661 0.00029816 5048500.0 1029.0 1286.1 1122.5 1150.9 1401.3 1388.1 1208.8 1188.0 1507.0 1420.0 1570.6 True False 1133.4633224902375 1394.4841605683428 1198.6796001408459 1221.9884791164552 1302.8775222225597 1376.7957738230875 1254.8015454807407 1164.3044080320296 1443.6660307336667 1330.3409576612844 1377.4261568537072 0.8228849995699767 1.0123839696449493 0.8702314778738114 0.8871535312700174 0.9458783076971399 0.9995423471323794 0.9109755461206984 0.8452753726497495 1.0480896007022718 0.9658165347317246 1.0 10.427759263352165 -8.777761099476738 24.999942784180455 1.0227089857269918 0.9169713887708951 0.31525354598899946 0.05897304552997785 161.7069333798233 247685.1876069774 0.009515069178273923 0.010143964104973585 1.6681645988409493e-09 8.777761099476738 -0.10573759695609664 AGADGGT(ph)PTDR ddPTM_A549_MK2206_60min_R1 2 AGADGGTPTDR 11 0 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AGADGGT(0.96)PT(0.04)DR;AGADGGT(0.9)PT(0.1)DR 117.25 1.8817e-05 16577000.0 1543.69 1683.74 1204.4 1360.05 1870.6599999999999 1463.06 1402.85 1514.13 1962.21 2173.95 2661.8999999999996 True False 1804.2271324030287 1769.4351741649898 1375.2020304270713 1693.2623110549653 1595.488392048318 1617.8800380993725 1657.7296862154756 1728.7625643286501 1517.7725680054893 1682.853185126153 2000.8767652974022 0.9017182685585614 0.884329912193262 0.687299714944047 0.8462601697527762 0.7973946320532994 0.8085855491749375 0.8285016423633054 0.8640025184518018 0.7585537472018642 0.8410578873786965 1.0 10.966416598547786 -10.886467450093766 1.0421401737224325 1.0040711130831723 0.8144978275367291 0.09403278120570502 0.0730718700368505 0.3083405119174892 0.5731593711024191 0.04438991928127825 0.009758748968873247 1.298770901669365e-11 10.886467450093766 -0.18957328554644326 AGADGGT(ph)PTDR ddPTM_A549_PD325901_60min_R1 2 AGADGGTPTDR 11 0 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AGADGGT(0.941)PT(0.059)DR;AGADGGT(0.928)PT(0.072)DR 100.04 0.00028786 28423000.0 2343.4 2334.5 2085.79 1600.4299999999998 2379.3 1974.8000000000002 2096.96 2059.61 2127.29 2138.94 2546.17 True False 2581.300242880098 2531.236507928462 2227.344252274186 1699.284926259752 2212.186176139397 1958.7178835428538 2176.7609603005417 2018.5294628172119 2037.887399150248 2003.8869633662162 2233.0072315014686 1.1559748694340044 1.1335549980402277 0.9974639673587288 0.7609849633658181 0.990675777906876 0.8771659383412819 0.9748114245187164 0.9039511535571506 0.9126201520538639 0.8973938530502686 1.0 11.124772207938198 -5.822558681825904 3.9529840026173213 0.9393628726051224 1.1488772215596263 0.628060662270972 0.06586088017300852 0.1060618443685588 3.280391281136188 0.009145713554859639 0.0332098046964171 1.504670194183728e-06 5.822558681825904 0.20951434895450394 AGAEDDEEKGEGT(ph)PR ddPTM_A549_MK2206_60min_R1 1 AGAEDDEEKGEGTPR 15 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AGAEDDEEKGEGT(1)PR 119.31 2.709e-07 23132000.0 3383.8 3195.9 2809.8 2566.7 5961.8 5465.7 4294.6 5709.7 5749.3 3986.0 3990.4 True False 3954.902714032846 3358.5576592074144 3208.2718906459527 3195.541615223541 5084.827117548707 6044.076746161971 5074.873229797185 6519.067460222898 4447.09272974552 3085.5598316027704 2999.473550562663 1.3185322848707755 1.1197157109711442 1.069611662367925 1.0653674924468322 1.6952398585394621 2.015045855306235 1.691921313606917 2.1734038824913138 1.4826244188455344 1.0287004634609824 1.0 11.550493594503052 -3.6029666736718506 16.44577186357756 1.367118522016296 1.1642027092283287 0.0 0.40326435826892476 0.0 0.0 0.05853047949451644 0.0 0.00024947861612710314 3.6029666736718506 -0.20291581278796733 AGAEDDEEKGEGT(ph)PR ddPTM_A549_PD325901_60min_R1 1 AGAEDDEEKGEGTPR 15 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AGAEDDEEKGEGT(1)PR 119.38 2.6869e-07 23254000.0 4941.4 4894.4 6420.9 5408.8 5670.1 4959.8 5629.3 4506.0 4898.1 5278.5 6095.5 True False 5443.047290333586 5306.868264898291 6856.660886008335 5742.889291723937 5271.851736783086 4919.409033216448 5843.526091971157 4416.1242951113845 4692.2498906015735 4945.214609165556 5345.792142558116 1.0181928412444652 0.9927187820585185 1.2826276636201617 1.0742821902865454 0.9861684847066188 0.9202394896825091 1.0931076136407467 0.826093528768992 0.87774641539957 0.9250667585438755 1.0 12.384188027830344 -6.82321127636692 3.365282955688837 0.9428499135318956 1.1002613112675195 0.3643420526721304 0.09366105341451021 0.20544985572310384 4.7099012873523645 0.014121686089732945 0.02877206172479347 1.5024108927025757e-07 6.82321127636692 0.15741139773562385 AGAEDDEEKGEGT(ph)PREEGK ddPTM_A549_MK2206_60min_R1 4 AGAEDDEEKGEGTPREEGK 19 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AGAEDDEEKGEGT(1)PREEGK;AGAEDDEEKGEGT(1)PREEGK;AGAEDDEEKGEGT(1)PREEGK;AGAEDDEEKGEGT(1)PREEGK 151.42 1.1168e-21 271382000.0 11003.8 9842.5 10090.800000000001 8829.0 12713.6 12014.5 11397.7 11441.800000000001 13346.2 12687.9 14607.7 True False 12860.972422919398 10343.441209283455 11521.827174222422 10992.105396348872 10843.446281604081 13285.866415420354 13468.51455578153 13063.710189042915 10323.307009501967 9821.694577870749 10980.20493798973 1.1712871021580404 0.9420080287843102 1.0493271518420177 1.0010838102227007 0.9875449814317685 1.2099834648307344 1.2266177755191665 1.1897510349597022 0.940174347182264 0.8944910075302216 1.0 13.422617361056703 -8.783172272582691 24.99578405796821 0.9717489869716885 1.091645861556605 0.32708129798451246 0.09495132718183301 253.27714805049754 291301.85215900745 0.017258104960431536 0.018380535614565496 1.6475087408415984e-09 8.783172272582691 0.11989687458491638 AGAEDDEEKGEGT(ph)PREEGK ddPTM_A549_PD325901_60min_R1 4 AGAEDDEEKGEGTPREEGK 19 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AGAEDDEEKGEGT(1)PREEGK;AGAEDDEEKGEGT(1)PREEGK;AGAEDDEEKGEGT(1)PREEGK;AGAEDDEEKGEGT(1)PREEGK 158.77 2.7396e-26 329431000.0 13821.199999999999 12712.3 13642.7 13599.8 16269.3 12886.5 13195.300000000001 12861.900000000001 14200.400000000001 14305.1 16531.1 True False 15224.318049370322 13783.610134820734 14568.575662219617 14439.828758613225 15126.600494038037 12781.556616505452 13697.45436224522 12605.35931453465 13603.606571221208 13401.873544676362 14497.879499276925 1.0501065380029975 0.9507328389305612 1.0048763105629495 0.9959959150807816 1.0433664105700746 0.8816155919314218 0.9447901924504458 0.8694622765462587 0.9383169843493099 0.9244023269295881 1.0 13.823554282576369 -7.23354306308691 24.99371470243903 0.953990871928935 1.004824388972037 0.38549718485194584 0.04497041120558908 947.4295212949324 848850.7114492591 0.007308879216285214 0.012657457744913555 5.8405929099198385e-08 7.23354306308691 0.05083351704310202 AGAES(ph)PTMSVDGR ddPTM_A549_MK2206_60min_R1 2 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.471)PT(0.471)MS(0.058)VDGR;AGAES(0.959)PT(0.039)MS(0.002)VDGR 95.18299999999999 6.0431000000000005e-05 124437000.0 3948.7 4448.1 4948.4 4366.1 5521.0 4661.1 4161.8 3986.5 6276.9 6036.3 6034.700000000001 True False 4615.144023553848 4674.489290628774 5650.157528533148 5435.794696001681 4708.868213624473 5154.334508212231 4917.945188788229 4551.598583144227 4855.192172149594 4672.6956376075805 4536.117440752938 1.0174216350950103 1.0305044681234858 1.2455933080064376 1.1983364114795512 1.038083399543302 1.136287712021115 1.0841750137694655 1.0034128619008416 1.0703409326509177 1.0301090522100707 1.0 12.147242277014218 -8.054460042279239 4.864999127970732 1.0320761601062005 1.1140484575535432 0.25439990401919166 0.06765130418733639 0.24676637719416653 12.476754415900396 0.011451885991204556 0.015078580802094071 8.821449610783743e-09 8.054460042279239 0.08197229744734269 AGAES(ph)PTMSVDGR ddPTM_A549_PD325901_60min_R1 1 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.416)PT(0.416)MS(0.167)VDGR 61.532 0.0026708 68373000.0 2484.1 2342.0 2035.8 2324.5 2625.4 2287.7 2001.3 2568.4 2327.9 2426.1 2286.9 True False 2736.284003302232 2539.368559249716 2173.9616302598956 2468.0790856774693 2441.000961138307 2269.0697296845187 2077.46056665338 2517.1712471291794 2230.0664584903147 2272.915631959185 2005.625797853524 1.3643043514052713 1.2661228041479213 1.083931824464229 1.2305780511593316 1.2170769660774874 1.131352484652391 1.0358166358234597 1.2550552799146906 1.1119055513132077 1.1332700418950143 1.0 10.96983674308458 -2.0000000017701614 0.07086518303101165 0.8121982747026768 2.022918277337384 0.36757018020794163 0.08323275450544203 106.96785285505997 0.5434748962751884 1.576099524733833 12.877564635804584 0.009999999959240528 2.0000000017701614 1.2107200026347071 AGAESPT(ph)MSVDGR ddPTM_A549_MK2206_60min_R1 2 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.249)PT(0.584)MS(0.167)VDGR;AGAES(0.404)PT(0.445)MS(0.15)VDGR 49.443999999999996 0.014338 4185500.0 1172.25 1651.1599999999999 1400.54 1378.05 1592.47 1239.0900000000001 1100.35 1130.56 1775.0700000000002 1982.49 2145.2 True False 1370.09714123914 1735.1969913254225 1599.1576317621468 1715.6723118630146 1358.2197725322524 1370.2096813586263 1300.2693518388971 1290.8203421947906 1373.0194792043183 1534.6441321008986 1612.4876354919368 0.8496791609947146 1.0760994088466604 0.9917332676317092 1.0639909876515725 0.8423132944631153 0.8497489538520421 0.806374773498472 0.8005148776232246 0.8514914775054621 0.9517245889657382 1.0 10.655072382696982 -6.76404536683434 24.996502332644745 0.8976988642699629 1.0008815091205103 0.32347667023581905 0.08048568576076123 83.10410812660547 797142.6582653264 0.013552933985868081 0.026475695980875413 1.721688716273151e-07 6.76404536683434 0.1031826448505474 AGAESPT(ph)MSVDGR ddPTM_A549_PD325901_60min_R1 1 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.421)PT(0.538)MS(0.04)VDGR 61.532 0.0035540999999999997 69033000.0 2927.2 3260.7 2756.4 2186.1 3130.5 3169.9 2862.0 2818.0 3048.4 3399.6 3129.5 True False 3224.3671891092517 3535.490632427643 2943.4658795797113 2321.1304320066747 2910.6244796387123 3144.0853853769954 2970.9149761464914 2761.792779321765 2920.286349096555 3184.9486758206344 2744.5913395350067 1.174807754678527 1.2881665046085264 1.072460528888209 0.8457107615882533 1.0604946673524938 1.1455568412271067 1.0824616886861667 1.0062673956370032 1.0640149981641038 1.1604455023749487 1.0 11.422375637420155 -5.868695053125972 5.779291976275583 1.0310810948266464 1.2295116163635267 0.4083694515081291 0.0837724020298842 0.11344358259383333 5.318472962676504 0.010181637433236983 0.032785452962488776 1.3530222761375504e-06 5.868695053125972 0.19843052153688023 AGAGMITQHS(ph)SNASPINR ddPTM_A549_PD325901_60min_R1 1 AGAGMITQHSSNASPINR 18 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 AGAGMITQHS(0.517)S(0.129)NAS(0.354)PINR 62.792 0.00068255 4300500.0 1178.3 911.96 910.14 941.78 1205.6 1251.5 1040.5 1000.6 1013.5 867.1 1150.5 True False 1297.9201485813865 988.8140697238983 971.9075735164264 999.9516116624338 1120.922815094212 1241.3081989335026 1080.0967968834473 980.6422480444849 970.9061195411882 812.3511580197878 1008.995793620394 1.2863484236384162 0.9799982080955152 0.9632424432901838 0.9910364522675476 1.1109291259502785 1.2302412029682945 1.070467095812099 0.9718992430343308 0.9622499178687994 0.8051085675045062 1.0 9.978704444700364 -8.225261536835449 6.177645670950387 0.9808778063449394 1.0839271636391654 0.2907433264057434 0.10825612294509214 0.24817713295513116 28.67425157720213 0.015366110991583297 0.019719948702249062 5.953035373310665e-09 8.225261536835449 0.10304935729422604 AGAGMITQHSSNAS(ph)PINR ddPTM_A549_MK2206_60min_R1 2 AGAGMITQHSSNASPINR 18 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 AGAGMITQHS(0.081)S(0.081)NAS(0.838)PINR;AGAGMITQHS(0.018)S(0.284)NAS(0.698)PINR 74.444 0.00012962 8893200.0 1422.67 1776.78 1684.4499999999998 1494.8899999999999 1573.9 1216.4 1329.08 1305.05 2518.6000000000004 2766.3 2808.8 True False 1662.7819150579553 1867.210512759019 1923.3303388848217 1861.1381171081614 1342.3813949327223 1345.1186406190297 1570.5566321098215 1490.0448340480045 1948.141121377746 2141.3909087212114 2111.2974410636566 0.7875640270848137 0.8843900799777087 0.910970809454428 0.8815139358907825 0.635808753813693 0.6371052294466707 0.7438822221650524 0.7057484204107833 0.922722248171857 1.014253542429528 1.0 11.043914125554139 -8.912824555604589 4.558013935903988 0.9671418002244976 0.7754363394737598 0.5088021262019744 0.0904436099725824 0.14993069678252943 5.390377781521548 0.018053968225828627 0.018956009671739063 1.2222933371862084e-09 8.912824555604589 -0.1917054607507378 AGAGMITQHSSNAS(ph)PINR ddPTM_A549_PD325901_60min_R1 2 AGAGMITQHSSNASPINR 18 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 AGAGMITQHS(0.077)S(0.146)NAS(0.777)PINR;AGAGMIT(0.205)QHS(0.08)S(0.08)NAS(0.636)PINR 65.598 0.00053853 14902500.0 2652.69 2711.52 3134.4 2517.67 3239.69 2699.34 3259.2 3173.8999999999996 3305.1 3087.1 3783.1 True False 2921.9891359928342 2940.029306480267 3347.1192326783653 2673.180757856569 3012.1453507237607 2677.357470003326 3383.2306395026712 3110.5940746236183 3166.1981407948515 2892.1799791522167 3317.8026830467747 0.8807000943496553 0.8861374793332815 1.0088361341623453 0.8057081789450353 0.9078735652711193 0.8069670579519452 1.0197202675102466 0.9375464341258309 0.9543057388474039 0.8717154862555889 1.0 11.696012373290205 -7.776270570634196 24.986871882593995 0.9769738590043509 0.8862373911996133 0.22582414571606557 0.06310392797265424 175.52535216395702 295715.93967135175 0.008198479936721978 0.011353002442141586 1.6738996916598265e-08 7.776270570634196 -0.09073646780473754 AGAGPGGPPQKPAPS(ph)SQR ddPTM_A549_MK2206_60min_R1 1 AGAGPGGPPQKPAPSSQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 AGAGPGGPPQKPAPS(0.5)S(0.5)QR 75.358 0.00013734 7864500.0 1165.3 1168.7 1351.8 1239.9 1484.9 1262.5 1062.4 1281.2 1420.9 1783.6 1947.1 True False 1361.9741511503269 1228.1818380786963 1543.5055668642613 1543.6755556612268 1266.4731770351357 1396.096912020325 1255.424328071654 1462.8140235104433 1099.0684187110453 1380.6835212360018 1463.5813327737976 0.9305763339910167 0.8391619997988295 1.054608672781437 1.054724818562446 0.8653247678657529 0.9538908981398557 0.8577755810074169 0.9994757317231561 0.7509445454787792 0.9433596140634789 1.0 10.515287204736765 -6.802417170471466 24.999108340801143 0.8914912407975376 0.9664994575221733 0.07223007465171605 0.08772163807504346 275.0668443222499 167807.84622216038 0.015595805240855578 0.029473507335526422 1.5760965904338503e-07 6.802417170471466 0.07500821672463565 AGAGPGGPPQKPAPS(ph)SQR ddPTM_A549_PD325901_60min_R1 1 AGAGPGGPPQKPAPSSQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 AGAGPGGPPQKPAPS(0.68)S(0.32)QR 92.932 1.2111e-06 18104000.0 2709.9 2054.4 2620.9 2416.8 2815.6 2652.8 2535.0 2697.4 2804.9 2974.8 3082.2 True False 2985.007053077058 2227.5314979174273 2798.77003475202 2566.0802470489602 2617.8419692926855 2631.196476333038 2631.470812205227 2643.598240930636 2687.0198073024985 2786.970620317455 2703.1089396755992 1.1042866268776017 0.8240627912631423 1.0353892858968166 0.9493070032748722 0.9684559622694501 0.9733963872905576 0.9734978763086887 0.9779843505855502 0.99404791566594 1.031024158668174 1.0 11.400403940657027 -8.67553784568485 1.415338135881431 0.9980755068062842 0.97010478351499 0.03857458736627595 0.06406361900169535 1.065001251856391 4.166745987700716 0.010897456222639903 0.012046124724810082 2.1108732401571405e-09 8.67553784568485 -0.02797072329129424 AGAGPGGPPQKPAPSS(ph)QR ddPTM_A549_PD325901_60min_R1 1 AGAGPGGPPQKPAPSSQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 AGAGPGGPPQKPAPS(0.216)S(0.784)QR 86.35700000000001 7.3014e-06 16698000.0 2793.3 2510.8 2491.6 2485.7 3065.8 2556.5 3001.1 2949.6 2401.3 3095.3 2931.7 True False 3076.8737596812252 2722.3939276533674 2660.6949592079563 2639.2360435657065 2850.468784435827 2535.6807116048744 3115.308502764932 2890.767914083565 2300.3817117456906 2899.862229752796 2571.1194855774957 1.1967058617620538 1.0588360217891213 1.0348390940728067 1.0264929570058123 1.1086488980482316 0.9862165978005253 1.211654503122093 1.1243226657878458 0.8947004309404956 1.1278597692636838 1.0 11.328180941603232 -8.756331932566576 24.999987019023116 0.9502752017634148 1.0889946019253893 0.06819609572451646 0.08722545455369388 87.0139133431963 425916.3790821421 0.012416271863638261 0.013868451018851648 1.7525405178902985e-09 8.756331932566576 0.13871940016197448 AGAHLQGGAK ddPTM_A549_MK2206_60min_R1 6 AGAHLQGGAK 10 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;;; 110.87 0.00018864 224347600.0 9737.56 10816.02 9246.09 7190.56 11821.682 9224.07 9279.75 9230.77 13074.97 13569.060000000001 12882.19 False True 11381.022067515127 11366.509219043339 10557.324594413356 8952.247522796508 10082.728237887457 10200.154964957885 10965.760455970387 10539.259915547522 10113.510171436666 10503.799921878554 9683.186692643052 1.1753384943163423 1.1738397265106142 1.0902737837776528 0.9245146052588363 1.0412613696220443 1.0533882376457335 1.1324536853453202 1.0884082120976646 1.044440274927319 1.0847461951610387 1.0 13.241266194671672 -5.908802714737875 4.078732305475976 1.0320626840946698 1.1735259217268221 0.45459135473469325 0.05195072183529854 0.1268879227040356 3.9290734097683635 0.00737051451764665 0.025044192928106185 1.2336651182064779e-06 5.908802714737875 0.1414632376321523 AGAHLQGGAK ddPTM_A549_PD325901_60min_R1 3 AGAHLQGGAK 10 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;; 110.87 0.00018864 442944900.0 5320.8 5225.6 4312.9 4287.4 6293.4 5656.4 4976.900000000001 4808.7 5499.9 6215.8 5207.1 False True 5860.963699034067 5665.979651244798 4605.5993295745675 4552.222960608124 5851.373295051353 5610.336153773443 5166.298652964179 4712.7867061478255 5268.758329417445 5823.333327204933 4566.6597105265155 1.2834246627845025 1.2407273610039877 1.008526936867727 0.9968386630855998 1.281324571122186 1.2285426349682176 1.1313079976279923 1.031998660921565 1.1537444573048734 1.2751844228247804 1.0 12.15692357443821 -14.99999999665881 0.18948187442703837 0.33628236471903367 1.1797280044238507 0.0 0.12725374256525823 54.627667869474294 0.6247239641706283 13.456392461859132 0.10128205725478358 1.0000000076933753e-15 14.99999999665881 0.8434456397048171 AGAPGALS(ph)PSYDGGLHGLQSK ddPTM_A549_MK2206_60min_R1 2 AGAPGALSPSYDGGLHGLQSK 21 0 K7ENH8;A0A0A0MRB7;P15923-2;X6REB3;P15923;P15923-3 K7ENH8 TCF3 Transcription factor E2-alpha 1 AGAPGALS(0.928)PS(0.072)YDGGLHGLQSK;AGAPGALS(0.88)PS(0.12)YDGGLHGLQSK 157.83 5.401299999999999e-28 19574500.0 4757.2 5451.9 4932.9 5054.5 7066.700000000001 4557.7 4518.299999999999 4983.8 7738.3 8963.5 8451.099999999999 True False 5560.0990576266495 5729.378423052317 5632.459395461394 6292.8527269051265 6027.197791200884 5039.992788843593 5339.2166241774785 5690.268912247384 5985.587405525848 6938.639124578884 6352.458631505649 0.8752672595222875 0.9019151096296631 0.8866581779103059 0.9906168763846961 0.9487976452626388 0.7933924612821954 0.8404960872467715 0.8957585152976725 0.9422473647982111 1.0922761606295261 1.0 12.633099359849654 -9.287628069295693 1.229202459781696 0.984705312242314 0.8928107481459647 0.4397965645776195 0.059091163413255515 0.3224856712098275 1.0136823317146457 0.012796638907231619 0.010823712096972443 5.156700764671846e-10 9.287628069295693 -0.09189456409634922 AGAPGALS(ph)PSYDGGLHGLQSK ddPTM_A549_PD325901_60min_R1 3 AGAPGALSPSYDGGLHGLQSK 21 0 K7ENH8;A0A0A0MRB7;P15923-2;X6REB3;P15923;P15923-3 K7ENH8 TCF3 Transcription factor E2-alpha 1 AGAPGALS(0.792)PS(0.208)YDGGLHGLQSK;AGAPGALS(0.98)PS(0.02)YDGGLHGLQSK;AGAPGALS(0.971)PS(0.029)YDGGLHGLQSK 195.24 7.1583e-56 26293400.0 10129.3 11097.5 10723.3 12951.4 13914.8 13904.0 11439.099999999999 13228.2 14254.8 14318.800000000001 14918.599999999999 True False 11157.619079203463 12032.725271679636 11451.047622441269 13751.37856323648 12937.472451454 13790.77043385651 11874.421210215696 12964.353173677855 13655.720328402302 13414.708524338303 13083.706776797231 0.8527873078744389 0.9196724962545465 0.8752143270857051 1.0510307818594118 0.9888231731390859 1.054041539536272 0.9075731681234179 0.9908776919908479 1.0437195331081162 1.025298774513051 1.0 13.675483711737867 -6.253786076384387 24.995787011258713 1.012594754378278 0.8862694792865106 0.6420486218627761 0.04146107188825155 272.02266258438993 888426.8278965412 0.00574943809566567 0.014897253054070142 5.574602736062984e-07 6.253786076384387 -0.1263252750917675 AGAPGALSPS(ph)YDGGLHGLQSK ddPTM_A549_PD325901_60min_R1 1 AGAPGALSPSYDGGLHGLQSK 21 0 K7ENH8;A0A0A0MRB7;P15923-2;X6REB3;P15923;P15923-3 K7ENH8 TCF3 Transcription factor E2-alpha 1 AGAPGALS(0.372)PS(0.628)YDGGLHGLQSK 139.04 8.408600000000001e-19 6438700.0 3022.2 2552.3 2659.1 3180.5 2809.4 3150.1 2876.7 2920.0 2917.4 3587.1 3864.6 True False 3329.01151917395 2767.391278297631 2839.5625164672797 3376.9522615604205 2612.0774359038464 3124.4466300123277 2986.1743926906424 2861.7583093043136 2794.791823531786 3360.609893821682 3389.278699717841 0.9822182871686215 0.8165133420653833 0.8378073236360511 0.9963631087173661 0.7706882989945038 0.9218618198239169 0.8810648687401372 0.8443561485641639 0.8245978189295716 0.9915413253272605 1.0 11.726762558889998 -10.901224037711856 1.1424359782524522 1.000291893053653 0.8695935981314784 0.3283434415714941 0.06607592234879328 0.42033734041174986 0.970824786131437 0.04346928615304025 0.01027354198485167 1.2553821877698874e-11 10.901224037711856 -0.13069829492217466 AGAPVGGS(ph)PGLAK ddPTM_A549_MK2206_60min_R1 3 AGAPVGGSPGLAK 13 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK 111.88 3.9027e-05 33874900.0 12470.1 14270.0 11891.599999999999 13077.3 17019.399999999998 12291.5 11986.5 12053.6 19107.699999999997 18824.0 21075.7 True False 14574.748015326264 14996.282047901948 13578.007692649095 16281.239087062313 14515.868805462851 13592.178371562642 14164.29189423088 13762.234712601832 14779.836458726888 14571.645326164225 15842.022030271039 0.9200055389063808 0.9466141392334233 0.8570880451184925 1.0277248103778682 0.916288891514343 0.857982544500356 0.8940962124131414 0.8687170543195095 0.9329513890641915 0.9198096870665015 1.0 13.951468868178262 -10.002750030909827 0.9181580755751166 0.992861355448635 0.9132348671213897 0.045909392272005856 0.05097502877714502 0.4442770600378242 0.758093186207054 0.018083532614427373 0.009050526016221423 9.936878258251863e-11 10.002750030909827 -0.07962648832724528 AGAPVGGS(ph)PGLAK ddPTM_A549_PD325901_60min_R1 2 AGAPVGGSPGLAK 13 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK 175.74 5.7036e-22 58993000.0 14329.8 15240.3 15202.1 14568.9 17311.5 15887.1 14556.599999999999 18423.4 17609.1 16774.300000000003 19189.2 True False 15784.550746958797 16524.653566837493 16233.805923653583 15468.787864627446 16095.599961432852 15757.72072495121 15110.559378677166 18055.930834122286 16869.050764294778 15715.16783528005 16829.050050361122 0.9379347437748031 0.9819124381582609 0.964629962777087 0.9191717784626537 0.9564176179443633 0.9363404754157872 0.8978854619517231 1.0729025571906738 1.0023768848398427 0.9338119375872217 1.0 14.038666122687166 -8.249725665819172 24.99897203944515 1.006537291089589 0.9438980677059234 0.3848377697893234 0.03643954638040064 449.1144445770978 958483.7974458415 0.0045992874175642 0.005911726291680376 5.626966559342916e-09 8.249725665819172 -0.06263922338366545 AGAPVPEPPKEEQQQALEQFAAAAAHS(ph)TPVRR ddPTM_A549_PD325901_60min_R1 2 AGAPVPEPPKEEQQQALEQFAAAAAHSTPVRR 32 2 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55;J3QRQ6;J3KS70;J3QLU5 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 AGAPVPEPPKEEQQQALEQFAAAAAHS(0.5)T(0.5)PVRR;AGAPVPEPPKEEQQQALEQFAAAAAHS(0.5)T(0.5)PVRR 103.4 9.742299999999999e-15 9909000.0 1603.8 1907.6100000000001 1804.18 1836.3 2030.84 1839.8000000000002 1951.04 1969.1799999999998 1921.9299999999998 2260.69 2620.42 True False 1766.6165953448408 2068.3709894578774 1926.6225042156887 1949.7240804601145 1888.200804417659 1824.8172787837455 2025.2878948500525 1929.9031601081736 1841.157965791609 2117.9496475882306 2298.1249522109997 0.7687208624775599 0.9000254696629622 0.8383454095314127 0.8483977681824076 0.8216266929267891 0.7940461535949599 0.8812784060768959 0.8397729454403408 0.8011565968248384 0.9215989955422466 1.0 11.166241526090134 -10.80626398441442 0.9051301806745168 1.0066488369607736 0.8333418576935294 0.5593363201834003 0.04193357884311707 0.24221299644253494 0.3296895163324291 0.02908927161299781 0.0062208598764733804 1.5621977774117743e-11 10.80626398441442 -0.17330697926724414 AGAS(ph)PPPVSELDR ddPTM_A549_MK2206_60min_R1 2 AGASPPPVSELDR 13 0 Q9NX00 Q9NX00 TMEM160 Transmembrane protein 160 1 AGAS(0.995)PPPVS(0.005)ELDR;AGAS(0.999)PPPVS(0.001)ELDR 79.46600000000001 0.00075969 5938800.0 2612.2 2656.1 2394.4 2275.0 3155.6 2630.7 2439.5 2495.8999999999996 3197.3999999999996 3029.3999999999996 3450.7 True False 3053.075497841659 2791.2841448796316 2733.9619243229645 2832.375102128632 2691.415420198044 2909.0789278826674 2882.725572600527 2849.7014683731786 2473.1940051986026 2345.0564359903237 2593.7959555249045 1.1770684935098568 1.0761386758021843 1.0540389341341596 1.0919806918873256 1.0376357532924692 1.121552727262989 1.111392577531085 1.0986606183509477 0.9535036863368477 0.9041021253022027 1.0 11.340849277154282 -8.75561018514722 24.996468920881647 0.9780434054963222 1.093271503621978 0.6858815389924291 0.042276706757541735 58.95082150655792 252789.76422724256 0.006282239844778022 0.0070309892405251775 1.7554554599018388e-09 8.75561018514722 0.11522809812565582 AGASIPSSGAAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AGASIPSSGAASPR 14 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 AGASIPSSGAAS(1)PR 116.87 3.4824e-06 27620000.0 2670.8 2779.8 2554.2 2851.7 4095.1 3481.9 2825.5 2727.9 5283.1 4185.9 3794.4 True False 3121.5657452092128 2921.2799465142143 2916.4239672175563 3550.366628017677 3492.716214746166 3850.3523469018364 3338.8567761355994 3114.588178843378 4086.486285377103 3240.3022827661907 2852.145759887473 1.0944622077562998 1.0242393595723764 1.0225367890498764 1.244805464696079 1.2245924678421645 1.3499844226242301 1.1706473151173482 1.0920157807664987 1.432776102417125 1.1360928071551406 1.0 11.47783199775291 -6.25923006770172 24.76250053809609 1.2120240396775308 1.0447954350755058 0.2835018050231427 0.11249876065920147 227.2122134874906 2546619.6983700027 0.022037829562972122 0.055405458861151086 5.50515983049127e-07 6.25923006770172 -0.16722860460202504 AGAT(ph)SPPR ddPTM_A549_MK2206_60min_R1 1 AGATSPPR 8 0 Q9BQK8;Q9BQK8-2 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 1 AGAT(0.582)S(0.418)PPR 54.157 0.024944 7268200.0 1647.6 2177.9 1824.3 1277.0 1946.4 1656.6 1297.8 1610.5 2028.2 2543.1 2758.0 True False 1925.6746000474373 2288.745807436975 2083.013171793512 1589.865057326708 1660.0871383804897 1831.9003124379171 1533.5934610047 1838.793306949397 1568.815938369865 1968.611943740344 2073.1124830723315 0.9288809052915484 1.1040142906501036 1.0047757605060135 0.7668976335382169 0.8007704125732037 0.8836473309557519 0.7397541009120403 0.8869722805509926 0.7567442438265076 0.9495924412277337 1.0 11.017582681074726 -6.139940038824316 6.886458646862434 0.8602452269920111 1.0251610810230796 0.4135387098559832 0.08625324242103087 0.22604355764616524 11.826129297056562 0.014502796641648346 0.03880445385988362 7.245359867446188e-07 6.139940038824316 0.16491585403106845 AGATS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 AGATSPPR 8 0 Q9BQK8;Q9BQK8-2 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 1 AGAT(0.254)S(0.746)PPR;AGAT(0.436)S(0.564)PPR 50.966 0.030195999999999997 20803800.0 4887.9 5569.0 4179.9 6375.6 5796.4 3937.7 4437.5 4761.4 5094.700000000001 5004.7 5722.6 True False 5384.116009718198 6038.319174407198 4463.573149780597 6769.406331961833 5389.280860494437 3905.632676740272 4606.371490793171 4666.430141753959 4880.587476296493 4688.7023878925565 5018.7564785502545 1.0727988163461326 1.2031504617158593 0.8893783089212508 1.3488214383171826 1.0738279260067254 0.7782072498302357 0.9178312417588734 0.9297980807990767 0.9724694746907359 0.9342358825202375 1.0 12.293114229621562 -7.012483068114913 24.94584066411767 0.9616324924994957 1.1286015690256062 0.38813930270452124 0.11805735226037149 523.8722654425213 1046894.8866433565 0.016269836131294044 0.02913416135931794 9.716658332776824e-08 7.012483068114913 0.16696907652611048 AGAVTST(ph)PNR ddPTM_A549_MK2206_60min_R1 2 AGAVTSTPNR 10 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 AGAVT(0.012)S(0.183)T(0.805)PNR;AGAVT(0.007)S(0.112)T(0.881)PNR 77.67699999999999 0.0014679 42311000.0 2356.9 2685.7 1867.2600000000002 2099.1400000000003 2813.7 1991.89 1704.48 1675.5700000000002 3253.6 3663.1 3413.2 True False 2754.687099327388 2822.39065844781 2132.0655457781927 2613.429394233975 2399.8084572858506 2202.670477690428 2014.1619528535148 1913.0871787179142 2516.664794931563 2835.6031658665597 2565.6082404722533 1.0736974787781048 1.100086370913858 0.831017577876871 1.018639304710418 0.9353760326417241 0.8585373413382009 0.785062162289737 0.7456661342675494 0.9809232583647761 1.105236224742016 1.0 11.325085177351198 -5.732724775696714 24.824519701434173 0.9420465789285897 1.0868921634762332 0.256501946788114 0.10456430530036975 228.01295853348216 197119.54704129611 0.014452976173963617 0.05595503196212283 1.850440922552357e-06 5.732724775696714 0.1448455845476435 AGAVTST(ph)PNR ddPTM_A549_PD325901_60min_R1 2 AGAVTSTPNR 10 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 AGAVTS(0.004)T(0.996)PNR;AGAVTS(0.004)T(0.996)PNR 118.91 6.6279e-05 52910000.0 7188.900000000001 7794.9 6558.7 7733.6 8700.900000000001 8363.9 7045.6 7611.2 7797.299999999999 7791.4 7759.200000000001 True False 7918.711835811527 8451.803579203934 7003.812822667052 8211.286907720058 8089.7788004754675 8295.787171442207 7313.724163500255 7459.388645129106 7469.606596841154 7299.449674311355 6804.867589621352 1.1636834562202192 1.2420232235076045 1.0292357243437225 1.2066784253441976 1.1888223678024004 1.219096045909075 1.0747783211322144 1.0961842455988442 1.0976858107031573 1.0726806331168486 1.0 12.732351374436155 -9.43487229961697 0.34703307688883034 0.9843802140894876 1.1808798744964484 0.3816745368929002 0.061092950578375924 0.809403774621433 0.2395574422461797 0.06058421222361037 0.03029280802280773 3.67390312431584e-10 9.43487229961697 0.19649966040696076 AGAVTSTPNRNS(ph)SK ddPTM_A549_PD325901_60min_R1 2 AGAVTSTPNRNSSK 14 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 AGAVT(0.017)S(0.017)T(0.045)PNRNS(0.841)S(0.081)K;AGAVT(0.021)S(0.02)T(0.02)PNRNS(0.894)S(0.046)K 44.567 0.015684 7178500.0 2999.7 3156.1000000000004 3068.1000000000004 2970.7 3165.2 2867.5 3255.8 2726.3 3038.5 3128.8999999999996 3361.7 True False 3304.2273357375752 3422.075623333915 3276.3197159840774 3154.1933920507904 2942.8872713472124 2844.1480307165957 3379.701250642124 2671.921807759025 2910.802411668378 2931.3407200185848 2948.2322115720817 1.1207486719560895 1.1607211975711935 1.1112827894370811 1.0698592124698632 0.9981870694567783 0.9646960709380537 1.146348390529242 0.90627929417211 0.9873043243484051 0.9942706373374538 1.0 11.525634444539412 -6.466394654985623 1.8358187834913058 0.996381535845798 1.13958537556979 0.5289126338466529 0.05479532074214763 0.1904310232788204 1.251657063220998 0.007493158951842877 0.02169660741351235 3.4166881782581674e-07 6.466394654985623 0.14320383972399198 AGCFS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AGCFSPK 7 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 AGCFS(1)PK 72.547 0.01968 10573000.0 5575.9 6754.7 6765.1 5457.5 8084.8 6739.7 6495.5 6007.7 8817.3 9037.3 9098.9 True False 6516.975602333397 7098.485378343605 7724.492906046319 6794.587744996485 6895.536629869799 7452.89058054922 7675.64827088614 6859.309872809621 6820.195628334788 6995.767653322564 6839.392013135177 0.9528589076072005 1.0378825142221464 1.1294122183976718 0.9934490861098991 1.008209006974128 1.0897007462411583 1.1222705550646779 1.0029122266476598 0.9971932615116195 1.0228639680087155 1.0 12.739652367284918 -8.480942796035556 24.99780503603683 0.9987471040164362 1.0494709145393624 0.13167333481320054 0.05063560332760449 619.7748069963282 369445.4193857261 0.008122545843169033 0.009819172773511258 3.304130591862371e-09 8.480942796035556 0.05072381052292618 AGCFS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AGCFSPK 7 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 AGCFS(1)PK;AGCFS(1)PK 83.265 0.014588 51224000.0 22049.0 23725.0 26347.0 20643.8 21588.0 20573.6 22325.0 23831.0 17318.1 22248.0 25573.0 True False 24287.398248384092 25724.389012894735 28135.065857381596 21918.92064052852 20071.73335455694 20406.055422755326 23174.59009170876 23355.672009942176 16590.28048231501 20843.257483132566 22427.68312060352 1.082920519153943 1.1469927087235616 1.2544793729288473 0.9773154240971231 0.8949534932619834 0.9098601631306714 1.0333029036966856 1.041376939577238 0.7397233317905275 0.9293540207006314 1.0 14.45299297085817 -6.44276283391622 4.6302896546206265 0.9034589121262169 1.1585277121340651 0.5314495912435628 0.08959735928765711 0.14526206280479428 5.598107207256489 0.016458881342559996 0.03892172374278899 3.607756070234645e-07 6.44276283391622 0.25506880000784826 AGDGSS(ph)VKEVETYHR ddPTM_A549_PD325901_60min_R1 1 AGDGSSVKEVETYHR 15 1 Q6PL18 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 AGDGS(0.078)S(0.915)VKEVET(0.007)YHR 84.436 4.7913e-05 23382000.0 6236.7 6108.8 6738.8 6359.3 6754.4 7731.7 6421.9 7827.5 7460.0 7291.1 8700.4 True False 6869.845192784121 6623.610014835467 7196.135491696329 6752.099517981815 6279.994245415014 7668.735598636968 6666.288918698519 7671.37437194504 7146.482142848812 6830.738701693092 7630.3059563797315 0.9003367927914101 0.8680661106777033 0.943099206353529 0.8849054751646434 0.8230330842977908 1.0050364484041567 0.873659451771368 1.0053822763857814 0.9365918200008229 0.8952116390538549 1.0 12.897525191381407 -9.015231014172006 0.18744252150007362 1.0327857876656892 0.8591719692146008 0.0570683028339557 0.057215200845149826 2.431589581471864 0.35700209566242663 0.15762127111643248 0.11977896063197035 9.65537144397329e-10 9.015231014172006 -0.17361381845108836 AGDKTLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 AGDKTLTPR 9 1 P46013 P46013 MKI67 Antigen KI-67 1 AGDKT(0.066)LT(0.934)PR;AGDKT(0.131)LT(0.869)PR 66.289 0.0021525 63771000.0 5537.5 6733.5 6794.2 6060.5 6771.1 5015.0 4996.5 4009.6000000000004 8151.4 10242.2 10834.900000000001 True False 6472.094621123262 7076.206388896122 7757.719723619735 7545.322772066186 5775.080159621931 5545.683971312423 5904.299374256419 4577.973078885008 6305.120915110997 7928.479906483173 8144.295301972585 0.7946782847566556 0.8688543485379555 0.9525341893903062 0.9264549592447459 0.7090951329113988 0.6809286458423521 0.724961357040476 0.5621079429396676 0.7741763628811285 0.9735010350819254 1.0 12.991574157343825 -10.497688473917975 1.0099180096316211 0.9896979561176159 0.7797030904301167 0.3590822912413092 0.10711407028111246 0.4659009374451627 0.9048392578734807 0.06202322953562488 0.021539813975381208 3.179153708578537e-11 10.497688473917975 -0.20999486568749925 AGDKTLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 AGDKTLTPR 9 1 P46013 P46013 MKI67 Antigen KI-67 1 AGDKT(0.077)LT(0.923)PR;AGDKT(0.053)LT(0.947)PR 64.878 0.0024056 119158000.0 17486.2 17596.1 18502.3 20446.4 20547.0 25766.0 23408.0 23612.6 21848.9 19724.4 23888.2 True False 19261.386151339935 19078.98510051832 19757.97734136834 21709.32769085644 19103.849603301896 25556.170238690076 24298.804249349098 23141.62816927364 20930.666714596424 18478.998017812846 20950.10283977636 0.919393393848636 0.9106869425144066 0.9430969142478565 1.0362396717995388 0.9118737864632759 1.2198589397932944 1.1598417647485155 1.1046069007993795 0.9990722658820064 0.8820480815362961 1.0 14.354669705386783 -6.2086858380537215 1.5798379303278711 1.0320365786815204 0.9100956592822977 0.2299109232377532 0.09349128667509153 0.49977334456596123 2.3126395546532277 0.013291261639718588 0.053107688953557795 6.18463625432099e-07 6.2086858380537215 -0.12194091939922269 AGDLLEDS(ph)PK ddPTM_A549_MK2206_60min_R1 8 AGDLLEDSPK 10 0 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK 141.73 5.0237999999999996e-08 1635264900.0 49263.59 55804.74 47365.22 47146.11 87162.68 65511.729999999996 55978.83 66644.98 92092.5 68580.04 75376.4 True False 57578.079612861664 58644.96290468363 54082.32042147535 58696.90906646928 74341.16523570393 72444.13778543312 66149.4588092879 76092.11000669134 71233.6957915033 53087.76133309365 56658.359597191105 1.0162327328607685 1.0350628454762218 0.9545338200041452 1.0359796768521203 1.3120952629802127 1.2786133996901776 1.1675145429478218 1.342998818667946 1.2572495267765356 0.936980203989625 1.0 15.790001212199865 -6.548166745157538 24.12862370552492 1.1679881740401679 1.003588678363353 0.32777966893037114 0.11937066643949372 157.65791648665248 150429.19504643063 0.01868154341053907 0.038890078913004604 2.8303051059091137e-07 6.548166745157538 -0.1643994956768149 AGDLLEDS(ph)PK ddPTM_A549_PD325901_60min_R1 3 AGDLLEDSPK 10 0 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK 132.17 1.0249e-06 1816682900.0 43608.2 43511.09 44848.82 40862.97 45042.79 36695.33 42918.89 42357.87 41702.52 44264.59 48976.48 True False 48035.2723613399 47177.92225648363 47892.530623063496 43386.98285036176 41879.139819589735 36396.49539877787 44552.19184506776 41513.00905374383 39949.90810881976 41469.71623315783 42952.683447486605 1.1183299506785693 1.0983696120910058 1.115006718535206 1.0101111122290212 0.9750063665007247 0.847362550544153 1.0372388467774474 0.9664823177927194 0.9300910886664858 0.9654743989128914 1.0 15.390460645382271 -6.413222263323625 2.6785867768595097 0.9630974964812781 1.1110521744217008 0.6835619992704739 0.044602039996090956 0.12927823263925448 1.789933287039969 0.006655703825009061 0.017364877489871363 3.8616929266900684e-07 6.413222263323625 0.14795467794042272 AGDLLEDS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 AGDLLEDSPKR 11 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PKR;AGDLLEDS(1)PKR 90.861 0.00012457 44364000.0 7771.3 7602.299999999999 7684.6 7829.9 9312.0 7147.2 8085.0 7625.5 8033.3 8619.400000000001 9929.099999999999 True False 8560.236655071314 8242.972501274166 8206.123167253761 8313.535140006888 8657.957244656016 7088.995572846604 8392.679099281755 7473.403420410978 7695.6883375532625 8075.169613003999 8707.883645750766 0.9830444460805927 0.9466103173411756 0.9423785963490852 0.9547136225302792 0.9942665286852893 0.8140893770791092 0.9638023934067123 0.8582341846124477 0.8837610435124004 0.9273400910615617 1.0 13.08810641510738 -4.274866977895749 0.7561422901580617 0.933248219734984 1.1483473438981788 0.0826304880209382 0.05373602577847149 26.35223711675538 3.5627649618730652 0.009648083440532732 6.837494830726555 5.3104707623554416e-05 4.274866977895749 0.21509912416319488 AGDLLEDS(ph)PKRPK ddPTM_A549_MK2206_60min_R1 14 AGDLLEDSPKRPK 13 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK 166.92 3.5591e-20 21708328600.0 75546.7 92660.50000000001 80620.2 86003.00000000001 103888.4 79718.20000000003 75406.40000000001 76241.1 127132.9 119871.8 116353.5 True False 88297.13602051712 97376.52366500474 92053.35663686196 107073.73886082156 88606.55398013134 88153.92701134137 89106.76680374851 87048.50940357626 98337.50113952394 92792.67712541923 87459.71475676453 1.0095749370562386 1.1133871627162288 1.0525229460543393 1.2242635270261957 1.013112771137618 1.0079375087891325 1.0188321223270007 0.9952983455945188 1.1243748211735172 1.060976214974932 1.0 16.416331022735637 AGDLLEDS(ph)PKRPK ddPTM_A549_PD325901_60min_R1 16 AGDLLEDSPKRPK 13 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK 162.7 1.9922e-19 32267494100.0 174686.9 198370.49999999997 178843.4 223255.5 214315.30000000002 198288.59999999998 192221.2 210383.80000000002 232993.2 211899.6 223096.8 True False 192420.98549030087 215087.8782163303 190980.7885967295 237045.48518497148 199262.5326756473 196673.8033839756 199536.2829534767 206187.53006610135 223201.30605967867 198520.22309298805 195657.30792713622 0.9834592304722879 1.099309197775685 0.9760984172789073 1.2115340218891717 1.0184262207566184 1.0051952848968868 1.0198253521293723 1.0538197231196018 1.140776740845274 1.0146322935554137 1.0 17.577969471275775 -8.536642157456614 24.97144132512115 1.0681000207068714 1.0473482523279076 0.0 0.07068781289618553 1127.9685573663405 2046505.8188710876 0.012822282863182924 0.014542686481398372 2.906416447472921e-09 8.536642157456614 -0.020751768378963753 AGDLLEDS(ph)PKRPKEAENPEGEEK ddPTM_A549_MK2206_60min_R1 1 AGDLLEDSPKRPKEAENPEGEEK 23 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PKRPKEAENPEGEEK 55.586999999999996 0.0014546 7399700.0 1852.2 2597.4 2331.7 2308.1 2674.4 2006.4 2031.7 1755.3 3620.0 3517.5 3292.4 True False 2164.806078057697 2729.596565607604 2662.370121510131 2873.5846036145467 2280.9993027562577 2218.715916259469 2400.8335912492294 2004.119150380799 2800.0757799521307 2722.8943069901534 2474.806214382647 0.8747376119700423 1.1029536574396053 1.075789330913036 1.1611351979457418 0.9216880455123896 0.8965210703630543 0.9701097311363143 0.8098085170198819 1.1314323374812698 1.1002454621156643 1.0 11.273099846422157 AGDLLEDS(ph)PKRPKEAENPEGEEK ddPTM_A549_PD325901_60min_R1 3 AGDLLEDSPKRPKEAENPEGEEK 23 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PKRPKEAENPEGEEK;AGDLLEDS(1)PKRPKEAENPEGEEK;AGDLLEDS(1)PKRPKEAENPEGEEK 179.54 5.3429999999999995e-42 83270000.0 6974.9 6778.400000000001 10253.3 9752.2 8868.7 18465.8 15053.300000000001 14069.0 13179.5 9754.8 9954.199999999999 True False 7682.986713350005 7349.6395567968675 10949.150596101677 10354.571245146843 8245.793107354046 18315.42064711648 15626.161568981837 13788.382758083008 12625.611447945828 9138.880263235415 8729.896504872775 0.8800776399882386 0.8418930914810401 1.2542131043581306 1.1861046965868633 0.9445464906429857 2.0980112005787634 1.7899595442236649 1.5794440117802924 1.4462498428129793 1.046848637682515 1.0 13.091748835104218 -5.8682546995530585 1.2476509244062752 1.3347317986489509 0.7966641851990673 0.2503504138264835 0.3356505207166994 0.8746103122872114 2.09325823235571 0.056185616533908724 0.45435373710036236 1.354394870956994e-06 5.8682546995530585 -0.5380676134498835 AGDLLEDSPKRPK ddPTM_A549_MK2206_60min_R1 3 AGDLLEDSPKRPK 13 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 0 ;; 113.65 7.1363e-06 18238700.0 5499.7 5853.4 5817.8 5098.299999999999 6979.0 5652.799999999999 5154.299999999999 5078.2 7469.0 7767.200000000001 7885.099999999999 False True 6427.914905244536 6151.313058107163 6642.851521602973 6347.383728871386 5952.3983450253945 6250.975543975048 6090.769591660137 5798.050401335259 5777.283425542118 6012.584125445322 5927.012052310961 1.0845118667741316 1.0378438585608656 1.120775774196866 1.0709247210652324 1.0042831518630935 1.054658821140371 1.0276290208124896 0.9782417093406417 0.9747379243626705 1.0144376411552927 1.0 12.533089275825715 -7.425444320112917 0.8537427721295089 0.9871615361418754 1.0778034186043643 0.5934843027535874 0.027835969747636576 0.2631607839829316 0.3815074620176145 0.004954329853095861 0.010980259381289447 3.754530873550344e-08 7.425444320112917 0.09064188246248894 AGDLLEDSPKRPK ddPTM_A549_PD325901_60min_R1 2 AGDLLEDSPKRPK 13 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 0 ; 128.67 1.6761e-08 20916000.0 5065.8 5101.1 5159.2 5379.1 5665.4 5878.7 5655.4 5532.7 5640.6 5825.5 6570.700000000001 False True 5580.076286755141 5530.98759931201 5509.334336789891 5711.354790177537 5267.481848568967 5830.825816276773 5870.619341753623 5422.345958180813 5403.545197714881 5457.676935813948 5762.545555099106 0.9683353013699816 0.9598167244713237 0.9560591381207986 0.9911166403055552 0.9140894068781682 1.0118489755134774 1.0187545218725231 0.9409636603016074 0.9377010812406409 0.947094801009358 1.0 12.492490535298343 AGDNIPEEQPVAST(ph)PTTVSDGENKKDK ddPTM_A549_MK2206_60min_R1 1 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVAS(0.164)T(0.668)PT(0.132)T(0.034)VS(0.002)DGENKKDK 79.408 1.6044e-06 6627600.0 1914.0 2284.0 2041.3 2092.5 3416.8 2616.2 2215.8 1969.1 3383.7 3205.5 3052.3 True False 2237.036407192762 2400.2458442472357 2330.787034798058 2605.1625939358955 2914.1932462075893 2893.044547506991 2618.382178220231 2248.2259551158395 2617.29735265857 2481.3753236835632 2294.3296708055386 0.9750283211947214 1.046164321888628 1.0158902029017125 1.1354787531563515 1.2701719736660235 1.2609541620456155 1.1412406035358107 0.9799053657038258 1.1407677745542286 1.0815251858780839 1.0 11.163856990865114 -2.0008594130759407 10.966290737079323 1.0861489181934139 0.09389577373623159 0.0 0.10022096208363913 0.0 0.0 0.014433101627106464 0.0 0.009980230849384084 2.0008594130759407 -0.9922531444571823 AGDNIPEEQPVAST(ph)PTTVSDGENKKDK ddPTM_A549_PD325901_60min_R1 1 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVAS(0.131)T(0.844)PT(0.021)T(0.003)VSDGENKKDK 143.83 5.1728e-33 13338000.0 1515.0 2468.2 1622.0 2864.9 2500.9 2219.1 1840.0 2217.8 2543.6 2930.5 2403.0 True False 1668.8016847159467 2676.2038761486538 1732.0786738783534 3041.8583663400245 2325.2454116366243 2201.028385340261 1910.0222068866346 2173.5642391695574 2436.701337607269 2745.4677298777424 2107.4462338720627 0.7918596725714878 1.2698800249966988 0.8218851072162172 1.4433859889042784 1.1033474421619733 1.0444054751974656 0.9063207289408773 1.0313735193974625 1.1562341655237667 1.302746274496136 1.0 11.041280109606141 -7.251876255046764 20.089985036937538 1.0561710117397913 1.1014570225358105 0.0 0.19457924489592487 238.80952047863076 501668.8359446423 0.024998367651300202 0.042778089448028404 5.5991711779178594e-08 7.251876255046764 0.04528601079601913 AGDNIPEEQPVASTPT(ph)TVSDGENKKDK ddPTM_A549_MK2206_60min_R1 1 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVAS(0.005)T(0.004)PT(0.367)T(0.367)VS(0.257)DGENKKDK 100.18 8.6117e-11 12416000.0 781.4 839.44 1010.8 893.45 1252.7 802.39 831.28 689.43 1303.5 1568.4 1193.3 True False 913.2812166041929 882.1639104618649 1154.1466392856887 1112.3452901084945 1068.4294894416555 887.2983772166253 982.312815737392 787.1588137908245 1008.2593312617689 1214.097350698893 896.9706765954356 1.018184028123044 0.98349247470411 1.2867161317540463 1.2401133271497127 1.191153197445666 0.9892167050370891 1.0951448485092994 0.877574746120558 1.1240716754406546 1.3535530005363736 1.0 9.808917011684207 -7.257549484456725 24.628412575091875 1.04357955531596 1.1482944115311378 0.03756095692739758 0.13854771101092941 383.7972011214524 2429963.36933288 0.01608321592938607 0.02717823167168795 5.526504341657769e-08 7.257549484456725 0.10471485621517784 AGDNIPEEQPVASTPTT(ph)VSDGENKKDK ddPTM_A549_PD325901_60min_R1 1 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVASTPT(0.119)T(0.526)VS(0.354)DGENKKDK 165.87 3.986e-42 292010000.0 2707.7 2673.2 2695.7 2306.6 3490.7 3367.1 3231.4 3075.0 2845.0 3380.6 3110.8 True False 2982.5837106966123 2898.4799455962166 2878.6464125609587 2449.073443331319 3245.5252742612506 3339.6794539584475 3354.3726952899283 3013.6667127091678 2725.4345437540014 3167.1483390631947 2728.191320985939 1.0932458027242526 1.0624181388234668 1.0551482919902577 0.8976912375948217 1.1896252470623478 1.2241368221754783 1.2295225299953283 1.1046390660095133 0.9989895220284839 1.1608967137680877 1.0 11.413729105035609 -8.757937377467023 8.559200393439445 0.999473947317507 1.107667819402633 0.0 0.10013540611307184 0.13407113051715433 92.472789734404 0.016133910550466774 0.0177870520773834 1.7460739076456246e-09 8.757937377467023 0.10819387208512599 AGDNIPEEQPVASTPTTVS(ph)DGENKK ddPTM_A549_MK2206_60min_R1 2 AGDNIPEEQPVASTPTTVSDGENKK 25 1 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVAS(0.009)T(0.041)PT(0.146)T(0.146)VS(0.658)DGENKK;AGDNIPEEQPVAST(0.001)PT(0.034)T(0.178)VS(0.787)DGENKK 94.26100000000001 6.178e-09 33176000.0 2565.7 2801.5 3083.8 2144.1 4405.6 3088.3 2789.1 3229.3 4879.700000000001 4614.9 4497.9 True False 2998.7274346575073 2944.084383826018 3521.1292107530758 2669.404596252307 3757.5420760630286 3415.1018561523715 3295.8433673048316 3687.0631643164816 3774.455741279671 3572.390884812753 3380.9472942752136 0.8869488855194815 0.8707868320843353 1.0414623193668902 0.7895433924013764 1.1113873565629029 1.010102068711627 0.9748283780955461 1.0905414498947081 1.1163899974633635 1.0566242457732782 1.0 11.723211810837046 -6.7757187330085396 24.99890258117923 1.0525205706315102 0.9056052221743575 0.5316019149244378 0.06947123894641416 149.68652084266657 262056.48566223128 0.01039598488236503 0.019711611491143484 1.676027989354038e-07 6.7757187330085396 -0.1469153484571527 AGDNIPEEQPVASTPTTVS(ph)DGENKK ddPTM_A549_PD325901_60min_R1 1 AGDNIPEEQPVASTPTTVSDGENKK 25 1 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVASTPT(0.018)T(0.124)VS(0.858)DGENKK 153.99 2.6238e-35 16480000.0 2252.9 2669.4 2707.3 1885.9 3081.9 2172.2 2692.3 2798.9 2780.8 2257.6 3101.0 True False 2481.612749502677 2894.3597062601157 2891.033658317428 2002.387759810342 2865.437975977812 2154.5103233906143 2794.7569497830887 2743.073743805428 2663.9326464924907 2115.0547507155725 2719.5966588586184 0.9124929395023524 1.0642606493989601 1.0630376563011221 0.7362811515773519 1.0536260833547286 0.7922168592069223 1.0276365580460796 1.0086325613286578 0.9795322544669218 0.7777089826265764 1.0 11.409176987088896 AGDNIPEEQPVASTPTTVS(ph)DGENKKDK ddPTM_A549_MK2206_60min_R1 3 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVASTPT(0.007)T(0.035)VS(0.958)DGENKKDK;AGDNIPEEQPVAS(0.011)T(0.009)PT(0.085)T(0.085)VS(0.809)DGENKKDK;AGDNIPEEQPVASTPT(0.028)T(0.151)VS(0.821)DGENKKDK 183.55 3.802099999999999e-58 298984800.0 8036.3099999999995 8088.92 6892.79 6246.629999999999 9555.6 7471.110000000001 6567.3099999999995 7240.110000000001 11385.3 9529.800000000001 10675.0 True False 9392.642659084255 8500.611477429222 7870.291268106458 7777.054630421876 8149.983898226775 8261.697901278554 7760.505218362438 8266.417764406959 8806.547728588119 7377.011561266461 8024.102884988085 1.1705536174837072 1.0593846563623472 0.9808313005096949 0.9692117289487402 1.0156878613152125 1.0296101657339134 0.9671492663536507 1.030198376428125 1.0975118159394333 0.919356552003809 1.0 12.970124388955961 -12.68607405909325 14.746243550777349 1.0392357072491232 1.0363995572039997 0.0 0.06755165747128891 0.0 0.0 0.0 0.00807201588676329 2.0602785494418888e-13 12.68607405909325 -0.0028361500451234978 AGDNIPEEQPVASTPTTVS(ph)DGENKKDK ddPTM_A549_PD325901_60min_R1 2 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVAST(0.001)PT(0.029)T(0.161)VS(0.808)DGENKKDK;AGDNIPEEQPVAS(0.016)T(0.011)PT(0.14)T(0.14)VS(0.693)DGENKKDK 160.26 1.0792999999999999e-41 259108900.0 4501.0 4718.23 5538.5 4665.29 6075.9 5230.200000000001 5274.200000000001 5701.5 5973.3 5627.799999999999 5516.4 True False 4957.938206538926 5115.851800729624 5914.3759157060795 4953.454367657666 5649.149744717086 5187.6069852672845 5474.912567152982 5587.779109759776 5722.262973710293 5272.459747553643 4837.917771340755 1.0248082834125785 1.0574491015608651 1.222504431708644 1.0238814716945657 1.1676820507743997 1.0722809337517156 1.1316671398562637 1.154996710126226 1.1827945914269757 1.0898200417516524 1.0 12.240170533126872 -2.01683502096835 24.10383360501088 1.0983319831443241 0.0055143922674394386 0.0 0.07053342040310466 0.0 0.0 0.010604584252826822 0.0 0.009619776433744608 2.01683502096835 -1.0928175908768847 AGDPGEMPQS(ph)PTGLGQPK ddPTM_A549_MK2206_60min_R1 5 AGDPGEMPQSPTGLGQPK 18 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 AGDPGEMPQS(0.909)PT(0.091)GLGQPK;AGDPGEMPQS(0.979)PT(0.021)GLGQPK;AGDPGEMPQS(0.985)PT(0.015)GLGQPK;AGDPGEMPQS(0.88)PT(0.12)GLGQPK;AGDPGEMPQS(0.992)PT(0.008)GLGQPK 190.82 3.7865e-40 77027500.0 15658.2 19392.4 19051.3 14904.6 23591.300000000003 18662.6 17182.4 18131.899999999998 25303.4 25415.100000000002 26249.999999999996 True False 18300.921353764734 20379.390328362566 21753.060812251148 18556.22766909291 20121.05102120615 20637.46394476872 20304.2196674119 20702.15235161488 19572.220301226742 19673.811258446458 19731.40053685595 0.9275024000237972 1.032840537107148 1.1024590358712234 0.9404414873861613 1.0197477357789366 1.0459198730581922 1.029030839928772 1.0491983228937896 0.9919326438418866 0.9970813385343873 1.0 14.268205741888956 AGDPGEMPQS(ph)PTGLGQPK ddPTM_A549_PD325901_60min_R1 4 AGDPGEMPQSPTGLGQPK 18 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9;H0YHL2 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 AGDPGEMPQS(0.923)PT(0.077)GLGQPK;AGDPGEMPQS(0.985)PT(0.015)GLGQPK;AGDPGEMPQS(0.835)PT(0.165)GLGQPK;AGDPGEMPQS(0.976)PT(0.024)GLGQPK 214.82 1.2779e-55 120908000.0 15204.500000000002 16103.199999999999 15672.0 16295.5 18589.9 17808.399999999998 17856.399999999998 18724.0 18449.7 19236.6 21326.399999999998 True False 16748.049647038693 17460.273178185314 16735.59616339184 17302.036025234338 17284.209555673435 17663.3742947562 18535.935073397013 18350.53513130615 17674.323269560005 18021.997793061302 18703.387999188155 0.8954553927751306 0.9335353134385707 0.8947895517174894 0.925074966417066 0.9241218519566443 0.9443943683103243 0.9910469201730504 0.9811342807037249 0.9449797689235332 0.9635686215697161 1.0 14.191012008320072 -7.407325062130082 2.209685449356842 0.9751376181295563 0.9137669149288921 0.7375381501264803 0.017431826923507945 0.1569800762278846 1.5031944661170555 0.00347876226942065 0.005944434344927795 3.914487745929863e-08 7.407325062130082 -0.06137070320066429 AGDRNS(ph)EDDGVVMTFSSVK ddPTM_A549_MK2206_60min_R1 10 AGDRNSEDDGVVMTFSSVK 19 1 Q9NY61 Q9NY61 AATF Protein AATF 1 AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.998)EDDGVVMT(0.002)FSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.995)EDDGVVMT(0.004)FS(0.001)SVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.996)EDDGVVMT(0.002)FS(0.001)S(0.001)VK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK 214.02 7.559799999999999e-67 134081300.0 28513.170000000002 30933.6 28182.800000000003 26037.03 35987.6 30151.3 27657.899999999998 30322.2 39968.799999999996 37386.399999999994 39517.00000000001 True False 33325.49601592293 32507.988111911665 32179.544821587566 32416.103518846696 30693.871712485467 33341.890553186866 32682.982420343582 34620.46470784294 30915.930617058213 28940.786274017515 29703.838286283295 1.121925580618046 1.0944036187714932 1.083346351116095 1.0913102612000105 1.0333301513649618 1.1224775139105023 1.1002949216645852 1.1655215859369277 1.0408059160265035 0.9743113329357794 1.0 14.858361745551878 -8.955833658358197 7.707823567208589 1.01781605562995 1.0991563691802881 0.6217839936208689 0.03351591901866924 0.115962285232946 16.62743714817749 0.005680100244043628 0.005971738138409694 1.1070477195365441e-09 8.955833658358197 0.0813403135503381 AGDRNS(ph)EDDGVVMTFSSVK ddPTM_A549_PD325901_60min_R1 8 AGDRNSEDDGVVMTFSSVK 19 1 Q9NY61 Q9NY61 AATF Protein AATF 1 AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.991)EDDGVVMT(0.008)FS(0.001)SVK;AGDRNS(0.999)EDDGVVMT(0.001)FSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.991)EDDGVVMT(0.008)FS(0.001)SVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK 203.99 1.8132e-55 256162200.0 48660.5 48188.1 53401.299999999996 55340.49999999999 57570.5 46800.399999999994 46986.3 47820.299999999996 53141.399999999994 51274.40000000001 53874.200000000004 True False 53600.478138033206 52249.080303151684 57025.43334610361 58758.75699760547 53526.94668744301 46419.273059023166 48774.389358389926 46866.48660220037 50908.05176219647 48036.92563345616 47248.01493669175 1.134449314110936 1.1058471000985106 1.2069381840171012 1.243623823695813 1.1328930275518345 0.9824597524620025 1.0323055777844505 0.9919249870073358 1.0774643512623516 1.0166972241653218 1.0 15.527966097218608 -7.099252440501315 5.196451614485308 1.0302496903641247 1.1724027267233008 0.7551584364417092 0.04195868449084704 0.10192940421282792 4.245516487569084 0.006984332391758418 0.012299744938849031 7.956967047402307e-08 7.099252440501315 0.1421530363591761 AGDSAVLVLPPS(ph)PGPR ddPTM_A549_MK2206_60min_R1 2 AGDSAVLVLPPSPGPR 16 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;A0A087WVI1;Q96JY6-4 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR 124.25 4.3398e-08 6470200.0 3984.0 4662.299999999999 4069.1000000000004 3681.1 5682.1 4042.2 3934.6000000000004 3973.1 6236.6 5509.9 5833.4 True False 4656.401800551707 4899.5911557066 4646.159566598139 4582.9696652508555 4846.270617032357 4469.942921004801 4649.465889712661 4536.2990921084465 4824.0200578037175 4265.209763208254 4384.805786350302 1.0619402608541686 1.1174020913215361 1.059604414193536 1.0451933081089768 1.105241794771977 1.0194163980807376 1.060358455142126 1.03454960450694 1.1001673261836749 0.9727248984403495 1.0 12.09829722829575 -10.979545714701452 1.2070418361076067 0.9993971115712584 1.0696298828747068 0.4997446940960122 0.03020243270172709 0.36139359507217494 0.9231778481350958 0.02129765381315268 0.004724685630459932 1.0482244495819614e-11 10.979545714701452 0.0702327713034484 AGDSAVLVLPPS(ph)PGPR ddPTM_A549_PD325901_60min_R1 4 AGDSAVLVLPPSPGPR 16 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;A0A087WVI1;Q96JY6-4 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR 109.35 5.6082e-07 10228400.0 6840.700000000001 6782.3 6582.9 7528.6 8452.400000000001 8212.3 7883.0 7928.1 7866.599999999999 8180.700000000001 7781.9 True False 7535.162828142825 7353.868223483917 7029.655180193473 7993.624523308844 7858.732583197007 8145.421751579389 8182.99187874312 7769.967826025866 7535.994158838394 7664.169205873007 6824.775633528502 1.1040894576994384 1.0775252723849424 1.0300199680790159 1.1712655408095858 1.1515005042200832 1.1935076241280176 1.1990125856360792 1.138494251423279 1.10421126839919 1.1229921124763083 1.0 12.736565902457734 -10.04629512764696 0.8209378636385857 1.0080608602020633 1.1319828906553873 0.06293480909767546 0.05863057347034858 0.3839466383971233 0.519460443270212 0.024252318031425198 0.010831396370217638 8.988865297290363e-11 10.04629512764696 0.12392203045332395 AGDT(ph)SDQEGHSLEEK ddPTM_A549_MK2206_60min_R1 1 AGDTSDQEGHSLEEK 15 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 AGDT(0.553)S(0.447)DQEGHSLEEK 95.205 1.7961e-05 36275000.0 988.62 988.48 809.03 1226.1 1379.8 1177.7 806.38 995.39 1899.5 1470.2 1691.0 True False 1155.4748865616036 1038.7894098605548 923.7626192929376 1526.494555041721 1176.8332478100072 1302.323432306009 952.8888080482118 1136.4895807540277 1469.2662828781977 1138.0807989017544 1271.078030774225 0.9090511035406642 0.8172506995717791 0.7267552399833908 1.2009448028237255 0.9258544474198704 1.0245818122690329 0.7496697960138597 0.8941147224940877 1.1559213890143742 0.8953665875324265 1.0 10.311836883970729 -8.7457873716192 24.769156550766343 1.0736295439949668 0.9063241270692797 0.07621301510818734 0.1381747140270353 221.3097117881496 350220.3052315677 0.022406193249766223 0.025362414510253384 1.7956125344716437e-09 8.7457873716192 -0.16730541692568712 AGDTS(ph)DQEGHSLEEK ddPTM_A549_MK2206_60min_R1 1 AGDTSDQEGHSLEEK 15 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 AGDT(0.051)S(0.949)DQEGHSLEEK 177.41 3.4478999999999998e-28 28361000.0 2913.7 3581.1 3718.2 2419.0 4305.8 3971.9 3136.6 3287.6 4612.0 5083.1 4893.4 True False 3405.4613268743733 3763.3626938851903 4245.496670154381 3011.6551085930355 3672.4225238587715 4392.20382166616 3706.479619191971 3753.6273678527405 3567.3893638506142 3934.8241796337306 3678.2337290305095 0.9258414711378246 1.0231439791829429 1.1542215592899225 0.8187775248819853 0.9984201098679856 1.1941067765761137 1.00767919937728 1.0204972398102887 0.9698647847457179 1.069759147869826 1.0 11.844797441682063 -4.46768539730962 16.326452782412183 1.001507001392662 1.0111255441130322 0.0 0.09819739534067533 1022945.8944646578 0.06661088310231336 0.01200880000913068 4519913.912407544 3.406548705484803e-05 4.46768539730962 0.009618542720370327 AGDTS(ph)DQEGHSLEEK ddPTM_A549_PD325901_60min_R1 4 AGDTSDQEGHSLEEK 15 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 AGDT(0.148)S(0.852)DQEGHSLEEK;AGDT(0.16)S(0.84)DQEGHSLEEK;AGDT(0.119)S(0.881)DQEGHSLEEK;AGDT(0.161)S(0.839)DQEGHSLEEK 167.93 1.284e-27 90934000.0 10150.3 10005.3 10092.900000000001 9134.099999999999 11313.7 10966.599999999999 10863.0 10552.0 11242.4 11302.8 11164.7 True False 11180.750983744076 10848.4817446034 10777.864887538117 9698.29261195378 10519.064742146138 10877.291645564643 11276.397409461691 10341.532082116133 10769.921024499126 10589.139279052082 9791.512678864503 1.1418818879618382 1.1079474745531832 1.1007354267949534 0.9904795030177571 1.0743043579826124 1.11088980858329 1.1516501871873577 1.0561730777757021 1.0999241258959476 1.0814610189811935 1.0 13.25731604190827 -10.7250172513916 0.7585151500595242 0.993536769302806 1.0919615170514316 0.05792694540036003 0.047574274165681454 0.6660180199492587 0.6078130399963535 0.040703019740313866 0.008164743449544808 1.8835742671652366e-11 10.7250172513916 0.09842474774862564 AGEAPTENPAPPTQQSS(ph)AE ddPTM_A549_PD325901_60min_R1 1 AGEAPTENPAPPTQQSSAE 19 0 P16989-2;P16989 P16989-2 YBX3 Y-box-binding protein 3 1 AGEAPTENPAPPT(0.001)QQS(0.207)S(0.792)AE 113.66 3.0509e-12 8218400.0 623.84 568.62 532.59 780.58 915.13 932.32 831.11 1188.8 798.89 941.6 686.71 True False 687.1717775532651 616.5396029720632 568.7347601238425 828.7946537741968 850.8544258271116 924.7274950297107 862.738345850843 1165.0884514044412 765.31543151481 882.1472153055383 602.2490234133513 1.1410093679498212 1.0237286886373307 0.9443514858694816 1.3761660402151565 1.412795027885219 1.5354570270428276 1.4325275962443624 1.9345626246118248 1.270762428434091 1.4647549120226302 1.0 9.23421633881488 -4.018926831221076 13.793188514158501 1.2343499663621234 1.151978388014065 0.0 0.28899467788100786 0.0 0.0 0.04108536049955536 0.0 9.573553503910332e-05 4.018926831221076 -0.0823715783480583 AGEEDEGEEDS(ph)DSDYEISAK ddPTM_A549_MK2206_60min_R1 1 AGEEDEGEEDSDSDYEISAK 20 0 A2RRP1-2;A2RRP1 A2RRP1-2 NBAS Neuroblastoma-amplified sequence 1 AGEEDEGEEDS(0.839)DS(0.127)DY(0.033)EISAK 74.579 0.00011895 2542200.0 609.02 728.7 769.9 456.85 762.24 602.58 718.84 500.75 919.75 983.0 1092.9 True False 711.8076868905619 765.7877174706477 879.0833968995374 568.7782705087759 650.1155057332226 666.3446156397686 849.4439231843266 571.7328459825586 711.428093538943 760.9396172768501 821.5027674944711 0.8664702239062786 0.9321791085454885 1.0700918264471384 0.692363182468042 0.79137348218075 0.8111288750396732 1.0340122477920242 0.6959597320971977 0.8660081519977729 0.926277606583926 1.0 9.682121625137322 -10.457564811585772 0.9248103108881227 0.9955007841311804 0.8636353920134336 0.09067460377004066 0.11542680772854672 0.769588386648617 1.2395338597292234 0.06187632743654767 0.02075757190761918 3.486865442978144e-11 10.457564811585772 -0.13186539211774673 AGEEDEGEEDS(ph)DSDYEISAK ddPTM_A549_PD325901_60min_R1 2 AGEEDEGEEDSDSDYEISAK 20 0 A2RRP1-2;A2RRP1 A2RRP1-2 NBAS Neuroblastoma-amplified sequence 1 AGEEDEGEEDS(0.98)DS(0.02)DYEISAK;AGEEDEGEEDS(0.98)DS(0.02)DYEISAK 139.02 4.2961e-18 10684800.0 2867.1 2984.8 2948.1000000000004 3043.8999999999996 3009.1000000000004 3428.0 3222.5 2788.0 3052.2 3441.5 3366.8 True False 3158.1658813525346 3236.3395711565126 3148.1757943654593 3231.914789801525 2797.751196831446 3400.0835045497784 3345.1340009196624 2732.391152856311 2923.9266483114134 3224.2031026699365 2952.7049439036446 1.0695839717656512 1.0960592516494 1.0662006039124896 1.0945606998336748 0.9475214252639342 1.1515148208661423 1.1329049344487514 0.9253857749985455 0.9902535823460286 1.0919489633824895 1.0 11.527821483587516 -8.257542753755846 24.999527467194515 0.9900180453823402 1.07811130383041 0.26628065018044755 0.06099058776868467 258.18881654665836 1656459.3115509972 0.008266995661462778 0.010470180589246038 5.526589992149371e-09 8.257542753755846 0.08809325844806981 AGELT(ph)EDEVER ddPTM_A549_MK2206_60min_R1 1 AGELTEDEVER 11 0 P62269 P62269 RPS18 40S ribosomal protein S18 1 AGELT(1)EDEVER 55.401 0.018133 3025400.0 105.07 121.17 193.81 0.0 207.63 169.19 0.0 0.0 259.57 222.81 177.54 True False 122.80324728513246 127.3370354410847 221.2951722991288 0.0 177.08790204579788 187.0935735007674 0.0 0.0 200.77780944811445 172.4770662517344 133.45191814527254 0.9202059362792507 0.9541791321610579 1.6582389775636812 0.0 1.3269790686187384 1.4019549220499166 0.0 0.0 1.5044954934971604 1.2924285289326456 1.0 7.0601762317010985 AGELT(ph)EDEVER ddPTM_A549_PD325901_60min_R1 2 AGELTEDEVER 11 0 P62269 P62269 RPS18 40S ribosomal protein S18 1 AGELT(1)EDEVER;AGELT(1)EDEVER 57.019 0.014888 7648800.0 454.96999999999997 340.49 366.6 311.09 270.24 415.49 373.53999999999996 471.70000000000005 535.14 203.9 402.39 True False 501.1582194687885 369.1842872497588 391.47968054488535 330.30532276334884 251.25927467738856 412.1063871952704 387.7552691089309 462.2915734585089 512.649926799479 191.02571920220834 352.8985809603742 1.420119678874713 1.0461484040118973 1.1093263097842927 0.9359780418058347 0.7119872060511392 1.1677756993915043 1.0987725370096364 1.3099842232304642 1.4526834463441571 0.5413048663509871 1.0 8.463109818686505 -7.8700513410197965 2.5317331199547413 1.2254067613351136 1.0412109688016693 0.0 0.28002143364285886 0.47474544655307677 6.208669054977972 0.03675983851138162 0.05296656482992041 1.3488034215820862e-08 7.8700513410197965 -0.1841957925334443 AGEPDGES(ph)LDEQPSSSSSK ddPTM_A549_MK2206_60min_R1 4 AGEPDGESLDEQPSSSSSK 19 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK 263.2 1.0318999999999997e-110 109786000.0 6723.2 7104.5 7250.65 7320.58 9615.4 8580.59 8527.599999999999 6019.73 9779.3 10730.1 11094.5 True False 7857.911793541477 7466.0887042270015 8278.901197206946 9114.122428633322 8200.987397443354 9488.582338465334 10076.95453695768 6873.045162149951 7564.304164333113 8306.162957621907 8339.429457377079 0.9422601190768932 0.8952757190868114 0.9927419183195333 1.0928952004709325 0.9833990969476625 1.1377975420215003 1.208350593821929 0.824162515826552 0.9070529588378149 0.9960109381672695 1.0 13.025732969630715 -8.286518139098993 24.992268666952455 0.9449860315545681 1.0330873536973835 0.21510764971351293 0.09451505983093188 1133.0660784421518 1129155.0198012982 0.016595428368294675 0.02006728902956434 5.169896645040012e-09 8.286518139098993 0.08810132214281541 AGEPDGES(ph)LDEQPSSSSSK ddPTM_A549_PD325901_60min_R1 4 AGEPDGESLDEQPSSSSSK 19 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK;AGEPDGES(1)LDEQPSSSSSK 375.55 1.1042999999999995e-283 150734000.0 15050.5 14681.4 16241.8 13946.3 16773.8 15533.5 14989.9 15439.6 16610.3 16076.2 16718.6 True False 16578.415680407503 15918.653102377782 17344.06621787759 14807.73127665463 15595.666154468561 15407.000326115503 15560.348847288022 15131.645065868119 15912.226854874201 15061.145988418539 14662.31818793735 1.1306817563164413 1.0856846030987117 1.1829006842960554 1.009917469178708 1.063656234612278 1.050788840388882 1.0612475222430706 1.032009050132119 1.085246319914483 1.027200869287457 1.0 13.83982559856283 -2.000000026326044 0.01036199677309579 1.3218397896184516e-08 2.301203727416366 0.3923792104905389 0.04004308043675233 7010.402809452109 5.461873848921723 517.6606912125661 709.6256820404826 0.009999999393820453 2.000000026326044 2.301203714197968 AGEPNS(ph)PDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_A549_MK2206_60min_R1 2 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 2 AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR 229.87 4.600799999999999e-105 217363000.0 6121.7 7618.1 5624.3 6495.1 8464.400000000001 7322.5 7646.700000000001 7050.1 9826.2 9412.900000000001 9285.0 True False 7154.893298804561 8005.828750464038 6421.910311965277 8086.399791576124 7219.297972722881 8097.362089717892 9036.00640951197 8049.473265025734 7600.581389217026 7286.51935245703 6979.278247036473 1.025162351399682 1.147085481777927 0.9201396025000345 1.1586298045947308 1.0343903362483542 1.1602004968287627 1.294690667097106 1.1533389241851313 1.0890211165379988 1.0440219023437012 1.0 12.768862134383529 -4.297826043739461 16.287379799943945 1.0757613000707476 1.076408149520018 0.0 0.09929092748786533 0.0 0.0 0.01356344073761712 0.0 5.037023258958582e-05 4.297826043739461 0.0006468494492704036 AGEPNS(ph)PDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_A549_PD325901_60min_R1 2 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 2 AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(0.987)PDVT(0.013)AGCDPAGVHPPR 263.09 1.1433999999999998e-152 304980000.0 8605.2 9663.2 10095.9 9211.0 9427.8 6777.700000000001 3625.6 9453.9 7280.1 9513.2 10196.2 True False 9478.79356918658 10477.551777003348 10781.068485578584 9779.942550301215 8765.62385214433 6722.504658339277 3763.5741920044456 9265.334548058921 6974.14271422971 8912.534928467137 8942.132039037173 1.0600149413816071 1.1717062252338983 1.2056485453931427 1.0936924782151005 0.980261062337003 0.7517787289420421 0.4208810802138056 1.0361437862481562 0.7799194513997175 0.9966901505769733 1.0 13.126403133456725 -6.872221461244401 2.9545007663575746 0.8570558159687355 1.1449673203320392 0.4215386623141133 0.16348792502756973 0.21665503786120627 3.8080176569490596 0.02532847625627561 0.05153030972321076 1.342080415040776e-07 6.872221461244401 0.2879115043633037 AGEPNS(ph)PDAEEANSPDVTAGCDPAGVHPPR ddPTM_A549_MK2206_60min_R1 3 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR 288.61 3.730899999999999e-185 438885000.0 5483.28 6145.92 4959.860000000001 5032.2699999999995 7165.58 4997.8 2209.15 6188.2699999999995 9012.8 8540.8 7415.1 True False 6408.723610674988 6458.721076653221 5663.242728855872 6265.1763759071855 6111.532674186426 5526.663878728859 2610.5239592992234 7065.476223282051 6971.415190484137 6611.427348156784 5573.726023651067 1.1498095858104191 1.1587797909776767 1.0160604781837064 1.1240553176317023 1.0964896100477988 0.9915564301649366 0.46836244699182406 1.2676396710747926 1.2507638805535537 1.1861773112102074 1.0 12.444426373211744 -5.733780230491523 23.62902672262489 1.0725724176920401 1.1542949337739457 0.02641139633399836 0.20583883862921026 489.98446857645024 418576.1037126957 0.02916310111630173 0.1128740238715613 1.845949303351812e-06 5.733780230491523 0.0817225160819055 AGEPNS(ph)PDAEEANSPDVTAGCDPAGVHPPR ddPTM_A549_PD325901_60min_R1 4 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR 278.2 3.718399999999998e-168 599116000.0 11702.8 11288.8 10786.8 12596.7 12193.199999999999 11108.199999999999 11966.9 12775.900000000001 10514.4 11244.800000000001 12974.3 True False 12890.859640853976 12240.146794047041 11518.857114297796 13374.76954981862 11336.791696256427 11017.738502111975 12422.306928038946 12521.074652000345 10072.516332810923 10534.801408950429 11378.543350864044 1.132909480884923 1.075721770055705 1.0123314346227892 1.1754377636398416 0.9963306678789912 0.9682907699495059 1.0917308608834928 1.1004110338121216 0.8852201922705734 0.9258479828308125 1.0 13.474028259250789 -8.753757351908849 24.9971083789537 0.9457984229005066 1.0659778252542158 0.4695073127862265 0.062291202914252684 129.10872503077306 420115.8760740128 0.01160603103932324 0.01303825386191785 1.7629607689939745e-09 8.753757351908849 0.12017940235370916 AGEPNSPDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_A549_MK2206_60min_R1 2 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNSPDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(0.001)PDAEEANS(0.999)PDVTAGCDPAGVHPPR 207.33 3.2078999999999997e-79 146658000.0 4599.0 5176.9 3940.1000000000004 4016.7 5465.4 4864.0 4474.299999999999 4305.2 6428.0 6386.9 6646.0 True False 5375.1987652453045 5440.382097672286 4498.865426839675 5000.791680316515 4661.446899971599 5378.705251538108 5287.222393722704 4915.4752841220425 4972.068263406714 4944.094854105305 4995.614779731223 1.0759834379252324 1.089031548178139 0.9005629187208316 1.0010362889881534 0.9331077566037621 1.0766853507922995 1.0583727182437332 0.983958031364962 0.9952865628430669 0.9896869698930848 1.0 12.286446517252777 AGEPNSPDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_A549_PD325901_60min_R1 1 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNSPDAEEANS(1)PDVTAGCDPAGVHPPR 180.96 6.1076e-67 96807000.0 1150.7 1454.0 1555.4 1143.4 1561.1 1513.8 1096.4 1297.1 1164.4 1320.6 1732.2 True False 1267.518216899433 1576.5336828134436 1660.9587973800192 1214.0252211501906 1451.4537215026323 1501.4721146987902 1138.1241019731008 1271.2283229447353 1115.4643173100742 1237.2170906249937 1519.1503813205093 0.8343599372944586 1.0377732857777084 1.0933471878776373 0.7991474945982037 0.9554378153405509 0.9883630568513221 0.7491846205401966 0.8368021616396727 0.7342685299795441 0.8144138367325773 1.0 10.56904897454605 -7.7229614092646806 24.99214322555569 0.8593543203314042 0.9550451179478207 0.24135746008865377 0.10271052499888048 275.52750729449434 178959.58006654872 0.019100296905914756 0.028330033418499358 1.8925117768403703e-08 7.7229614092646806 0.09569079761641641 AGEQQLS(ph)EPEDMEMEAGDTDDPPR ddPTM_A549_MK2206_60min_R1 6 AGEQQLSEPEDMEMEAGDTDDPPR 24 0 Q93009;H3BMF6 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 1 AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(0.999)EPEDMEMEAGDT(0.001)DDPPR 69.782 3.7009000000000004e-05 26539900.0 2456.09 2557.37 2299.1400000000003 2586.3399999999997 3795.07 3529.4100000000003 2680.5699999999997 2399.52 4146.429999999999 3607.4900000000002 4065.44 True False 2870.617946364717 2687.529209589556 2625.1926239090812 3219.9934161052156 3236.8202302988284 3902.889823567254 3167.594871139904 2739.6593082218074 3207.270225488098 2792.555503489384 3055.8790475640244 0.93937551247423 0.8794619053171964 0.8590630005470071 1.0537044712787353 1.0592108456907154 1.277174182230288 1.0365576718963838 0.8965208588362521 1.0495409587773947 0.9138305083492925 1.0 11.577371726945158 -6.265418248725775 24.798359725325767 1.0380483036398744 0.8913163124341281 0.31228631383412153 0.09458363474399514 256.05346521561165 1595862.834330671 0.012675388605965131 0.03048977699136658 5.427274043219935e-07 6.265418248725775 -0.14673199120574631 AGEQQLS(ph)EPEDMEMEAGDTDDPPR ddPTM_A549_PD325901_60min_R1 8 AGEQQLSEPEDMEMEAGDTDDPPR 24 0 Q93009;H3BMF6 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 1 AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(0.964)EPEDMEMEAGDT(0.036)DDPPR;AGEQQLS(0.997)EPEDMEMEAGDT(0.003)DDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR;AGEQQLS(1)EPEDMEMEAGDTDDPPR 91.113 5.8824e-08 47542200.0 1878.8500000000001 2660.7900000000004 2637.28 2780.52 3337.3199999999997 2787.4 2902.7699999999995 2579.0 3048.8900000000003 2839.76 2778.71 True False 2069.589468863734 2885.024111343318 2816.261680052961 2952.2664053809067 3102.918156328977 2764.700338559524 3013.2365008066936 2527.5598218136392 2920.755756100577 2660.4570689635275 2436.946285693982 0.849255267140353 1.1838685687410357 1.1556519306911843 1.2114614190358217 1.273281308884222 1.1344937534280553 1.236480474968121 1.037183230771889 1.198531035848752 1.0917175666044256 1.0 11.250858736701202 -10.897955284418636 0.9987304591437622 0.9944372287917209 1.1531216707376322 0.07164323990121924 0.11336280649848862 0.7348564951740454 1.2231390062399803 0.08743795390691095 0.018075777401110986 1.2648665732394186e-11 10.897955284418636 0.15868444194591125 AGETRFT(ph)DTR ddPTM_A549_MK2206_60min_R1 2 AGETRFTDTR 10 1 P13639 P13639 EEF2 Elongation factor 2 1 AGETRFT(0.983)DT(0.017)R;AGET(0.001)RFT(0.931)DT(0.069)R 75.479 0.00061032 53128000.0 4847.700000000001 19921.8 5426.9 3895.7 5215.6 4010.8 2668.0 5100.2 3625.6000000000004 4757.200000000001 4966.4 True False 5665.873245114084 20935.73452711232 6196.516023683721 4850.146674884617 4448.392149063542 4435.22019384643 3152.74106484862 5823.168968707433 2804.4073888934936 3682.5452159811093 3733.105814333003 1.5177371140567069 5.6081278078780965 1.6598822352939004 1.2992256089454557 1.191606230925533 1.1880778136043473 0.8445356819900169 1.5598724649994589 0.7512263322743664 0.9864561571874632 1.0 11.86616068686051 -5.9803935653271925 23.966619436259357 1.0088831678498889 3.5807040412948767 0.5190018362717513 0.9001840757403748 66.90883255283046 81786.6209622567 0.10515567293077961 0.32686547199598687 1.0461800515101313e-06 5.9803935653271925 2.571820873444988 AGETRFT(ph)DTR ddPTM_A549_PD325901_60min_R1 2 AGETRFTDTR 10 1 P13639 P13639 EEF2 Elongation factor 2 1 AGET(0.001)RFT(0.83)DT(0.17)R;AGETRFT(0.99)DT(0.01)R 95.417 0.00022085 84319000.0 16511.1 12149.5 5357.3 7206.6 18854.4 12223.7 8281.2 7264.1 7735.5 7247.200000000001 8962.7 True False 18187.2947171706 13173.381003673954 5720.878594061962 7651.735314623902 17530.131988148893 12124.15423995482 8596.34559764652 7119.211826923795 7410.403835925869 6789.6105551851115 7860.344719236422 2.3138037028657656 1.6759291703117134 0.7278152292814081 0.9734605272333673 2.2301988798592824 1.5424456144122642 1.0936346820272274 0.9057124186298253 0.9427581232907732 0.8637802536279446 1.0 12.940376868625297 -7.829726850214971 4.2158816565946795 0.9691380100617126 1.5464603822525467 0.33283565183251007 0.43591820737013015 0.22274021645586206 7.789378648586914 0.06974573532164292 0.09871453069689295 1.4800389669240373e-08 7.829726850214971 0.577322372190834 AGETRFT(ph)DTRKDEQER ddPTM_A549_MK2206_60min_R1 2 AGETRFTDTRKDEQER 16 3 P13639 P13639 EEF2 Elongation factor 2 1 AGET(0.008)RFT(0.99)DT(0.002)RKDEQER;AGET(0.038)RFT(0.951)DT(0.011)RKDEQER 90.22 4.7631e-06 44684000.0 3313.2 16732.3 4173.5 3498.8 3937.9 2600.0 1930.45 2716.8999999999996 3523.6000000000004 4487.1 5389.0 True False 3872.387160037126 17583.902600568304 4765.3650564491745 4356.006157067102 3358.640126504585 2875.1302742596786 2281.187776850458 3102.028895157293 2725.5102260329636 3473.4609935737094 4050.7625711663486 0.9559649799277515 4.34088700377848 1.1764118416540688 1.075354598186895 0.8291377407334741 0.7097750667306658 0.563150206108878 0.7657888707765255 0.6728387996456181 0.8574832349587908 1.0 11.983977810950492 -5.974388036240537 24.779422134187673 0.8286264089744098 2.6759840398347654 0.47679679477841075 0.734492138830146 101.66909349644214 98362.91680140946 0.08490304780119494 0.26396182795147205 1.0607473702497195e-06 5.974388036240537 1.8473576308603556 AGETRFT(ph)DTRKDEQER ddPTM_A549_PD325901_60min_R1 2 AGETRFTDTRKDEQER 16 3 P13639 P13639 EEF2 Elongation factor 2 1 AGET(0.045)RFT(0.872)DT(0.082)RKDEQER;AGET(0.011)RFT(0.948)DT(0.041)RKDEQER 84.946 4.1416000000000005e-05 78092000.0 11577.4 9895.3 4816.700000000001 5446.2 12779.4 12665.2 7728.4 6281.4 5904.3 6489.200000000001 8254.2 True False 12752.729125168587 10729.211658558374 5143.590227170076 5782.599404782374 11881.819030536632 12562.05881033367 8022.5084911427475 6156.11254933703 5656.162803756333 6079.470804546202 7238.985727684881 1.7616734726243302 1.4821429496021001 0.7105401807188065 0.7988134833126301 1.641365168755014 1.7353341038221906 1.108236539334696 0.8504109250821569 0.7813474175152498 0.8398235655163384 1.0 12.821571856535948 -7.999526713569251 24.999772414189607 0.8946222177067403 1.3277516995930194 0.3261817272163198 0.32560719100523877 17.8178274682779 941095.0767458448 0.05442516805255713 0.07482523400504751 1.0010903763086354e-08 7.999526713569251 0.4331294818862791 AGFAGDDAPR ddPTM_A549_MK2206_60min_R1 7 AGFAGDDAPR 10 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P63267-2;Q6S8J3;A5A3E0;P0CG38;P0CG39;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;POTEJ;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;;;;; 176.6 2.1573e-10 366442100.0 20481.56 20967.149999999998 18545.520000000004 18896.79 24816.25 20219.7 19383.460000000003 19201.41 28453.8 26680.54 28062.920000000002 False True 23938.346601934685 22034.288377061464 21175.553602894284 23526.504398309153 21165.81249888759 22359.335233249392 22905.18377842978 21923.268669351906 22009.05973138175 20653.387483560226 21094.12246680935 1.1348349114593694 1.044570041334093 1.0038603708788105 1.1153108850736524 1.0033985785467512 1.0599793979783136 1.0858562054178862 1.0393069777539778 1.0433740377686729 0.9791062660254012 1.0 14.364553451031075 -14.999999998077273 0.1179681708539538 0.8032305170655315 1.0871909047990205 0.34708266265404264 0.03830013086837959 80.17059906605898 0.6610140505092449 3.733802554865905 0.14470647594102526 1.0000000044272423e-15 14.999999998077273 0.283960387733489 AGFAGDDAPR ddPTM_A549_PD325901_60min_R1 2 AGFAGDDAPR 10 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P63267-2;Q6S8J3;A5A3E0;P0CG38;P0CG39;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;POTEJ;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 176.44 2.2374000000000002e-10 479120000.0 22391.3 21459.3 21146.0 21074.6 24810.0 22565.4 22661.4 23077.9 22990.5 23161.8 25783.0 False True 24664.448292396148 23267.750522419887 22581.0947212279 22376.330178110744 23067.431189853512 22381.634863934523 23523.79197779391 22617.593180237698 22024.289236617366 21699.35999518247 22611.854451903197 1.0907751217335555 1.029006735025286 0.9986396635118661 0.9895840354760187 1.0201476946050292 0.9898186330334664 1.040330063499677 1.0002537929096753 0.974015169054992 0.9596453064625169 1.0 14.464791695338715 -5.253892125772268 1.6600811664455515 0.9944942643192546 1.1272411527672896 0.6489034669059832 0.020258851023019754 0.43660016709994354 1.1205784783386774 0.002752276038878638 0.09300525299207293 5.573241652608094e-06 5.253892125772268 0.13274688844803506 AGFDS(ph)DYDQALADIR ddPTM_A549_PD325901_60min_R1 2 AGFDSDYDQALADIR 15 0 P52701;P52701-2;P52701-3;A0A087WWJ1;A0A494C0M1;P52701-4 P52701 MSH6 DNA mismatch repair protein Msh6 1 AGFDS(1)DYDQALADIR;AGFDS(0.999)DY(0.001)DQALADIR 159.22 1.3773e-19 5132900.0 3333.75 2976.08 3188.46 2813.8500000000004 3439.52 3036.07 3299.34 3353.79 3394.79 3181.2000000000003 3565.1499999999996 True False 3672.1898458229625 3226.8847061536694 3404.8480693675547 2987.6551237829867 3197.9399808998346 3011.3452525257985 3424.8981891681233 3286.8960274526435 3252.1187820002274 2980.3384890930133 3126.6591513478893 1.174477187332651 1.0320551585428086 1.0889732153566338 0.9555423150281736 1.022797761476884 0.9631191334775396 1.0953858490432717 1.0512485910194838 1.040125777892436 0.9532022343427496 1.0 11.610406238986648 -3.4754210370193186 1.1527687933831001 1.0214577061891947 9.927720555936988 0.47787122617612876 0.0466519584311951 53.85735977257936 1.5290744856567349 0.005900738270992546 1206.7610849741639 0.0003346408563822487 3.4754210370193186 8.906262849747794 AGFS(ph)PDSSKADSDAASSGGSDSK ddPTM_A549_PD325901_60min_R1 1 AGFSPDSSKADSDAASSGGSDSK 23 1 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 AGFS(0.734)PDS(0.221)S(0.044)KADS(0.001)DAASSGGSDSK 137.82 4.21e-23 15265000.0 4834.5 5204.0 6260.4 5384.3 6775.1 6370.6 6073.0 6294.4 6098.6 7655.7 6796.4 True False 5325.294881029203 5642.5593434395905 6685.26839084343 5716.875982367475 6299.240348826136 6318.7199457657025 6304.1113382731155 6168.853254138728 5842.297050452784 7172.31779547006 5960.485885929292 0.8934330158553748 0.9466609688246693 1.12159788963264 0.9591291870790437 1.0568333638196392 1.0601014861359006 1.0576505773052844 1.0349581178778262 0.9801712750036852 1.203310926782244 1.0 12.541214225525438 -5.5314670800698655 24.99892549891192 1.0121101059903104 0.9067399577388566 0.2034815774713038 0.07360547980792817 119.83425203238353 348814.8991725906 0.006488132288900725 0.025207434260321838 2.941256635316496e-06 5.5314670800698655 -0.10537014825145374 AGGAS(ph)PAASSTAQPPTQHR ddPTM_A549_MK2206_60min_R1 4 AGGASPAASSTAQPPTQHR 19 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AGGAS(1)PAASSTAQPPTQHR;AGGAS(0.997)PAAS(0.003)STAQPPTQHR;AGGAS(0.997)PAAS(0.003)STAQPPTQHR;AGGAS(0.902)PAAS(0.032)S(0.032)T(0.032)AQPPT(0.001)QHR 156.22 5.8284999999999996e-27 412197300.0 2011.9199999999998 1756.88 1982.0 1947.95 2254.9800000000005 1760.33 1291.32 1768.1200000000001 2756.88 2961.6800000000003 2946.5899999999992 True False 2351.48290927861 1846.2976877587932 2263.0774031106403 2425.197837446799 1923.2754291539434 1946.6069521875154 1525.9361288831778 2018.7564246404038 2132.4510818327153 2292.6344310239074 2214.870381253116 1.0616796942980482 0.8335917547979517 1.0217651661539895 1.0949615191814002 0.8683467192630044 0.8788807546770189 0.6889505326356131 0.9114557861838596 0.9627882064259805 1.035109977734586 1.0 11.113006556446873 -4.1652527390904925 14.892415744070908 0.9515746506237327 0.9320378187080349 0.0 0.11432439402701261 0.0 0.0 0.0148256180297689 0.0 6.835137584548273e-05 4.1652527390904925 -0.019536831915697772 AGGAS(ph)PAASSTAQPPTQHR ddPTM_A549_PD325901_60min_R1 4 AGGASPAASSTAQPPTQHR 19 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AGGAS(0.999)PAAS(0.001)STAQPPTQHR;AGGAS(0.998)PAAS(0.002)STAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR 186.94 1.5140999999999997e-43 635414700.0 2394.39 2929.07 2801.2000000000003 2720.89 3340.7300000000005 2884.4500000000003 2666.5199999999995 2811.6899999999996 2600.3199999999997 3427.3599999999997 3267.95 True False 2637.466710143244 3175.9130084720573 2991.306276983996 2888.953195710461 3106.0886496928383 2860.959995536351 2767.995877775731 2755.608637221866 2491.037593256383 3210.955904683082 2866.0128672418655 0.9202564092747549 1.108129361445759 1.0437169739097187 1.0080042656928725 1.0837664705539205 0.9982369682413962 0.9658002270030065 0.9614781108340773 0.8691648323455213 1.1203564161849613 1.0 11.484829371395557 -7.759713574119735 2.1381754853383312 0.9388129941028727 1.0363879739675834 0.0 0.07638817735046288 0.2668057490527863 2.5030772664130376 0.009901390988105566 0.014976016340752185 1.7389473211119104e-08 7.759713574119735 0.09757497986471075 AGGASPAASS(ph)TAQPPTQHR ddPTM_A549_PD325901_60min_R1 1 AGGASPAASSTAQPPTQHR 19 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AGGAS(0.337)PAAS(0.022)S(0.539)T(0.102)AQPPTQHR 182.18 2.4888000000000002e-43 7978100.0 767.77 690.7 794.99 764.28 1038.4 664.87 767.37 1031.7 726.67 877.75 1204.9 True False 845.7134451975986 748.9077130118604 848.9428020632255 811.4878397941819 965.4663662855261 659.4555191569458 796.5726852709765 1011.1219341470076 696.1305869629955 822.3287152022478 1056.7049384904074 0.800330739823902 0.7087198003273635 0.8033868028250273 0.767941750091053 0.9136574753447984 0.6240677933227358 0.7538269731273786 0.9568630724783789 0.658774802318495 0.7782008820522919 1.0 10.045356876895918 -10.996100939385741 1.2297829053154206 1.0019706895349096 0.7667059436833674 0.0 0.1129844778695234 0.3430341492242533 0.9103069306066472 0.06876015982803327 0.015147906431140223 1.0090183412395798e-11 10.996100939385741 -0.23526474585154222 AGGEES(ph)QFEMDI ddPTM_A549_MK2206_60min_R1 2 AGGEESQFEMDI 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 AGGEES(1)QFEMDI;AGGEES(1)QFEMDI 56.225 0.0059653 1759660.0 159.66 153.24 464.90999999999997 429.34000000000003 432.03 291.9 223.12099999999998 140.68 564.28 572.19 479.45 True False 186.6067046877724 161.03926145903947 530.8412287992777 534.528319273805 368.47895930668017 322.7886642524616 263.6591975749958 160.62182081443106 436.4714809699966 442.93188159678607 360.3893328531651 0.5177919757236609 0.4468480245630698 1.4729659854154464 1.483196838935269 1.022446908706954 0.8956665329047814 0.7315954539709407 0.44568971990043293 1.211110987982072 1.2290371584811908 1.0 8.493412499295786 -5.734079907338782 24.982008642764008 1.0588879724631786 0.4823191196558672 0.3678738947275453 0.28931070534925674 180.68228002933753 164978.79772403126 0.04129147019505778 0.15984213897846505 1.8446759796608258e-06 5.734079907338782 -0.5765688528073114 AGGEES(ph)QFEMDI ddPTM_A549_PD325901_60min_R1 2 AGGEESQFEMDI 12 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 AGGEES(1)QFEMDI;AGGEES(1)QFEMDI 63.727 0.0024328 1412400.0 148.86 133.41 123.19 112.3 0.0 250.21 0.0 148.53 122.38 0.0 0.0 True False 163.97215761505996 144.6529289024357 131.5504142016488 119.23651594819525 0.0 248.17237271686113 0.0 145.56745263046912 117.23679418791382 0.0 0.0 0.0 AGGGAT(ph)PVS(ph)SPSR ddPTM_A549_MK2206_60min_R1 1 AGGGATPVSSPSR 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 AGGGAT(0.995)PVS(0.544)S(0.296)PS(0.165)R 65.563 0.008206399999999999 19205000.0 256.12 247.49 282.5 396.42 579.5 161.24 305.24 271.12 448.94 596.97 475.57 True False 299.3467944671944 260.086183884741 322.56274792066387 493.54291779597 494.2563176590081 178.30230977755033 360.69815690944256 309.55209027017725 347.25580680986457 462.11406238632867 357.4728439357171 0.8373973003695484 0.7275690679639745 0.9023419635721169 1.3806445053619845 1.3826401810479574 0.49878560792051024 1.0090225398332788 0.8659457509053268 0.971418704108081 1.2927249446378333 1.0 8.481689838917937 -5.997386899039579 24.242925023638733 0.9988971087989273 0.7906011092852944 0.13439935968588435 0.24385799138040845 91.01025337221884 844277.8088054579 0.03059258957024458 0.09425421578428556 1.0060350251439559e-06 5.997386899039579 -0.20829599951363298 AGGGAT(ph)PVSS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 AGGGATPVSSPSR 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 AGGGAT(0.983)PVS(0.026)S(0.918)PS(0.073)R 105.66 0.00015384 21231000.0 679.14 564.03 550.12 592.67 982.02 783.12 865.4 666.19 1192.1 1007.3 1327.3 True False 793.7622286211565 592.7367178330859 628.1352880924452 737.874176605967 837.5661588740277 865.9892386070155 1022.6319780809583 760.6244726213096 922.091253392524 779.7502303997674 997.6947783835762 0.7955962543045251 0.5941062644363172 0.6295866247893208 0.7395790702657983 0.839501395638271 0.8679901482596265 1.0249948182928093 0.7623819319307673 0.9242217894399107 0.7815518806894894 1.0 9.962454713692276 -6.941391124474083 1.3049949822921614 0.9495492707487174 0.6629571977293511 0.46309551510750147 0.09548164492327553 0.18298339198438976 0.6181131870305568 0.012865759750630368 0.03152315623177035 1.1444817598970713e-07 6.941391124474083 -0.2865920730193663 AGGGAT(ph)PVSS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 AGGGATPVSSPSR 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 AGGGAT(1)PVS(0.397)S(0.553)PS(0.051)R;AGGGAT(0.999)PVS(0.028)S(0.815)PS(0.157)R 108.97 0.00010363 63222000.0 1751.27 1781.73 2159.38 2050.0 2321.4 2203.0 1732.71 2286.8999999999996 2115.58 1959.25 1925.59 True False 1929.0576411831655 1931.8826400819792 2305.9285122068045 2176.6238441122027 2158.3528723952422 2185.059498402322 1798.6492272252935 2241.2859854616563 2026.6695297276262 1835.5426206323036 1688.7546373207263 1.1422959845982654 1.1439688142896738 1.3654609504819766 1.2888928894759393 1.278073690929756 1.2938880818524368 1.0650743379031777 1.3271827273958177 1.2000970922235423 1.086920846917384 1.0 10.721744015859489 -10.341520890630164 0.5563200005931092 0.9795743824700014 1.2447340139875642 0.39217525527493136 0.08914620504815828 0.6419517116769838 0.33490061794690457 0.08343595089476553 0.020253272349062344 4.554902754389241e-11 10.341520890630164 0.26515963151756283 AGGGAT(ph)PVSSPSR ddPTM_A549_MK2206_60min_R1 2 AGGGATPVSSPSR 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 AGGGAT(0.94)PVS(0.027)S(0.032)PS(0.001)R;AGGGAT(0.977)PVS(0.023)S(0.001)PSR 99.5 0.0001664 4619100.0 1208.76 1365.01 1625.4099999999999 1413.35 1502.26 1238.44 1165.29 1243.21 1733.02 2268.6000000000004 2398.5 True False 1412.7691366553406 1434.4831785708923 1855.9175791069952 1759.6208134476924 1281.2795440317889 1369.4908987900606 1377.0081092419227 1419.4388246709477 1340.4937370642667 1756.1216843888742 1802.88625476758 0.7836152352481429 0.7956592795455193 1.0294146811531666 0.9760021237027705 0.7106824075249082 0.7596102611401899 0.7637798034127452 0.7873146855035152 0.7435265167280767 0.9740612752163145 1.0 10.816092663762234 -10.920485287235202 1.1833390836238635 0.9996937734205428 0.8133920646927384 0.3291205505147653 0.09356276679273662 0.4717245714946483 1.1766052502339992 0.0710580645733179 0.016914161212473716 1.2009217564237287e-11 10.920485287235202 -0.18630170872780438 AGGGATPVSS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 AGGGATPVSSPSR 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 AGGGAT(0.005)PVS(0.283)S(0.711)PS(0.001)R;AGGGAT(0.015)PVS(0.228)S(0.755)PS(0.001)R 77.279 0.00092813 23248700.0 2768.2 3580.6 3318.1 3309.9 4238.1 3552.1 3096.3999999999996 3141.5 5665.5 5103.6 5038.7 True False 3235.4044840078377 3762.8372460208634 3788.6564738957713 4120.825648587059 3614.6811041771234 3927.980864306849 3658.975799549198 3586.817245440258 4382.273295944419 3950.69321539586 3787.4517289545156 0.8542430941822025 0.9935010437900824 1.0003180885269232 1.0880206385427829 0.9543834120824337 1.0371038749558201 0.966078530209867 0.9470265239341702 1.1570506001284662 1.0431006117367483 1.0 11.88701178622676 -8.742261130268945 24.974506465842005 1.0741627982016848 0.9853810399051554 0.25444313526735374 0.06525213617824017 264.98180772208303 345067.4890621423 0.012806038036665728 0.014509106855385347 1.8102513070753159e-09 8.742261130268945 -0.08878175829652946 AGGGATPVSS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 AGGGATPVSSPSR 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 AGGGATPVS(0.037)S(0.944)PS(0.019)R 88.803 0.00018988 16898000.0 4581.6 5155.9 4314.8 4800.9 5539.1 6155.9 4884.9 5268.9 5910.0 5368.0 5709.3 True False 5046.720659204346 5590.4057876326215 4607.628275000199 5097.4406893650075 5150.05272485762 6105.768391382137 5070.797542619849 5163.807656127911 5661.623252578615 5029.063563891387 5007.092294234609 1.0079144466770398 1.1164974518383985 0.9202203602888706 1.0180440842351617 1.0285515868736077 1.21942397555016 1.0127230026214202 1.0312986764940906 1.130720769636634 1.0043880296918188 1.0 12.289757333095016 -7.021748952727212 24.80702259851703 1.0687061574575392 1.0169588747935068 0.0977642938708384 0.0734238700176368 1344.133524114574 1533129.0684147477 0.011211927219720001 0.019538138834146717 9.511544569377184e-08 7.021748952727212 -0.05174728266403239 AGGGDLLLPPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AGGGDLLLPPSPK 13 0 Q5TH69 Q5TH69 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 1 AGGGDLLLPPS(1)PK 101.39 0.00014324 2979500.0 1797.7 1798.8 2025.6 1549.6 2715.6 2132.2 1636.8 1656.9 2958.8 2844.0 3185.6 True False 2101.1078104547687 1890.351236703996 2312.860538718926 1929.2520695641872 2316.1388373335685 2357.827988760189 1934.1853729176235 1891.7706490434377 2288.6365242326992 2201.538424756219 2394.5276019126964 0.8774623473859519 0.7894464174035933 0.965894290327438 0.8056921407058089 0.9672633698118525 0.9846735476662735 0.8077523814603926 0.7900391908334373 0.9557778838734564 0.9194040707643871 1.0 11.225525350393886 -8.94853768563633 9.37231812393274 0.9805785424351388 0.8758768270298128 0.20670017220172465 0.07187216005866985 0.2952223462739917 50.77768083562923 0.012106713843570946 0.012815715216287262 1.1258027738135952e-09 8.94853768563633 -0.10470171540532591 AGGGDLLLPPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AGGGDLLLPPSPK 13 0 Q5TH69 Q5TH69 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 1 AGGGDLLLPPS(1)PK;AGGGDLLLPPS(1)PK 98.94200000000001 0.00015873 8825700.0 5271.9 5578.6 5123.8 5238.2 5735.0 6531.799999999999 5278.1 6242.6 5951.7 6102.0 7415.299999999999 True False 5807.099407032343 6048.728200098405 5471.531879912396 5561.751717184651 5332.193384675934 6478.60718641139 5478.96098378714 6118.086445775037 5701.570746594274 5716.718678626165 6503.265109459634 0.8929513574012768 0.9301063540066881 0.8413515038704971 0.8552245100841023 0.8199255750653219 0.9962083780019398 0.8424938690900755 0.9407714959791017 0.876724330106239 0.8790536111330659 1.0 12.666948521958133 -11.266910082030911 0.46062675166957257 1.054766610000891 0.8831285655242654 0.0 0.06099488713364516 1.9671358932978593 0.39407321030558573 0.16708876673910109 0.011569533709246346 5.408662943531595e-12 11.266910082030911 -0.17163804447662556 AGGGDLLLPPS(ph)PKVEK ddPTM_A549_PD325901_60min_R1 2 AGGGDLLLPPSPKVEK 16 1 Q5TH69 Q5TH69 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 1 AGGGDLLLPPS(1)PKVEK;AGGGDLLLPPS(1)PKVEK 57.338 0.0024721 2226500.0 2301.8999999999996 2640.7 2425.5 2998.3 2869.7 3308.7 2699.1000000000004 2876.7 3184.9 3001.7 3240.4 True False 2535.5871934307834 2863.2410565374566 2590.1090157163662 3183.498181366643 2668.1421719275554 3281.7550441959884 2801.815727504193 2819.321961772508 3051.049728788095 2812.1721497266726 2841.8513425880265 0.8922307635985163 1.0075266829157752 0.911416081798845 1.1202198136329977 0.9388746455322055 1.15479476178629 0.9859121360488288 0.9920722873579301 1.0736134163898787 0.9895563879726638 1.0 11.472615373753566 -6.238619123327103 24.87906973193707 1.035219937070884 0.9441047229301089 0.2889868432565751 0.06583725313710859 700.750760257633 763970.8731149376 0.00821070090099403 0.021704386390316226 5.772725099974014e-07 6.238619123327103 -0.09111521414077517 AGGGGGLGAGS(ph)PALSGGQGR ddPTM_A549_MK2206_60min_R1 4 AGGGGGLGAGSPALSGGQGR 20 0 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(0.997)PALS(0.003)GGQGR;AGGGGGLGAGS(0.999)PALS(0.001)GGQGR 243.37 1.3600999999999996e-85 228642000.0 25988.9 27302.4 27217.6 23645.4 39609.1 28320.800000000003 27294.7 27905.6 40085.700000000004 40411.399999999994 43260.2 True False 30375.190952399153 28691.97554202087 31077.464947983954 29438.524061482327 33782.65385985748 31317.688258174458 32253.793681680527 31861.304257315805 31006.352953709178 31282.436673063778 32517.49841921886 0.934118318721789 0.8823549453934321 0.95571512135805 0.9053133079906059 1.0389069117288208 0.9631026302953465 0.9918903744027715 0.9798202754269921 0.9535282374422582 0.9620185498210059 1.0 14.988928654274654 -6.730770141068984 24.995437168248706 0.9811439044685136 0.9193267676925259 0.5593903522280493 0.02758368276335759 122.03377301033636 99456.97568974564 0.0039054658802951682 0.008129158079911582 1.8587879950435818e-07 6.730770141068984 -0.06181713677598777 AGGGGGLGAGS(ph)PALSGGQGR ddPTM_A549_PD325901_60min_R1 2 AGGGGGLGAGSPALSGGQGR 20 0 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR 238.3 2.8186999999999997e-85 327310000.0 26712.0 27451.0 25680.0 27226.0 31158.0 25957.0 27355.0 27142.0 28317.0 28406.0 31755.0 True False 29423.782575664944 29764.392109292865 27422.799226384792 28907.6881852677 28969.569569264626 25745.61479801592 28396.009494230355 26600.631517512906 27126.93496502008 26612.44031220171 27849.33631153031 1.0565344267641585 1.0687648630595794 0.9846841202830058 1.0380027682490662 1.0402247739480424 0.9244606230474728 1.0196296664518252 0.9551621345640323 0.9740603747813142 0.9555861588408304 1.0 14.765355326092383 -5.961406809240303 0.7032022541095878 0.9846393795729843 1.0772095481087993 0.42683154718548477 0.03381321651830515 1.059806767735215 0.6101361808376391 0.00527120836558829 0.06427980872717078 1.092932123025886e-06 5.961406809240303 0.09257016853581501 AGGGPTLQCPPPS(ph)SPEKAASLEYDYETIR ddPTM_A549_PD325901_60min_R1 2 AGGGPTLQCPPPSSPEKAASLEYDYETIR 29 1 Q96N66-3;Q96N66-2;Q96N66 Q96N66-3 MBOAT7 Lysophospholipid acyltransferase 7 1 AGGGPTLQCPPPS(0.455)S(0.455)PEKAAS(0.044)LEY(0.04)DY(0.004)ET(0.002)IR;AGGGPTLQCPPPS(0.499)S(0.499)PEKAAS(0.001)LEYDYETIR 52.465 0.0020567 5583700.0 1977.75 1974.23 2251.0 1991.6100000000001 2550.5 2629.1 2382.4 2907.8 2633.1 2661.4 2185.77 True False 2178.5297240574023 2140.6052906607874 2403.7663963626223 2114.6272264255126 2371.3616787473343 2607.689481275327 2473.0635356993016 2849.8016478750283 2522.4399638519035 2493.358749802635 1916.9341467376353 1.1364656046035633 1.1166817046395727 1.2539639926877562 1.103129823225448 1.237059542594655 1.360343799870885 1.2901139770023524 1.486645565120225 1.3158719970348267 1.3007013068477062 1.0 10.904585060996833 -4.0380712848080975 16.138733842776542 1.1983359764583952 1.1846123899287195 0.0 0.13670680540966293 0.0 0.0 0.02164834611826623 0.0 9.160701146402831e-05 4.0380712848080975 -0.013723586529675647 AGGGPTLQCPPPSS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 AGGGPTLQCPPPSSPEK 17 0 Q96N66-3;Q96N66-2;Q96N66 Q96N66-3 MBOAT7 Lysophospholipid acyltransferase 7 1 AGGGPTLQCPPPS(0.136)S(0.864)PEK 105.46 4.6459e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AGGLDWPEATEVS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 AGGLDWPEATEVSPSR 16 0 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 AGGLDWPEAT(0.015)EVS(0.97)PS(0.015)R 63.946999999999996 0.003221 51959000.0 6199.1 6761.1 6373.5 4631.5 8736.1 6482.1 6899.1 6061.1 9609.9 9726.4 9686.7 True False 7245.356526556243 7105.211111006995 7277.358137601249 5766.217707915937 7451.03126264169 7168.031519530258 8152.577166603118 6920.279486340267 7433.2729938569 7529.199484721825 7281.225050680475 0.995073833884467 0.9758263288871932 0.9994689199891075 0.7919296090672338 1.0233211047288457 0.9844540540414092 1.1196710869198048 0.9504279071409178 1.0208821925044351 1.0340566913280858 1.0 12.829965485890277 AGGLDWPEATEVS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 AGGLDWPEATEVSPSR 16 0 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 AGGLDWPEATEVS(1)PSR;AGGLDWPEATEVS(1)PSR 241.51 2.0570999999999997e-65 171900000.0 17991.7 16263.0 16175.9 16646.8 17477.4 17737.6 16625.5 16186.400000000001 18304.7 19127.4 21276.0 True False 19818.204139210495 17633.540085003457 17273.69384758868 17675.035028374157 16249.847717756782 17593.15086648253 17258.192500322686 15863.549554014839 17535.41711530892 17919.692699697505 18659.186879676243 1.0621151000313236 0.9450326104086598 0.9257474057673619 0.9472564449003921 0.8708765190328988 0.9428680349219907 0.9249166435607367 0.8501736788591555 0.9397739155723155 0.9603683598461517 1.0 14.18759849809612 -10.229844223687948 1.0223935061023954 0.99449417142808 0.931744014987417 0.08948828123514263 0.05163756949182904 0.578329623779673 1.1970215952477645 0.02062078521887631 0.009277209322095229 5.89054904518665e-11 10.229844223687948 -0.06275015644066306 AGGNQAAS(ph)QLEEAGR ddPTM_A549_MK2206_60min_R1 2 AGGNQAASQLEEAGR 15 0 Q9HBR0;Q9HBR0-3 Q9HBR0 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 1 AGGNQAAS(1)QLEEAGR;AGGNQAAS(1)QLEEAGR 101.42 7.0894e-06 4116000.0 1777.73 2110.8 2185.21 2010.21 2588.3 2198.6000000000004 1726.2 1991.58 3068.1 3139.7 3305.0 True False 2077.767362674395 2218.2307040442483 2495.1056367565106 2502.711540241757 2207.564498700278 2431.2543926874364 2039.8281957052811 2273.892563957951 2373.1802487489313 2430.439589383649 2484.2772866403384 0.8363669280591076 0.8929078553240394 1.004358752613649 1.0074203687730643 0.8886143710977293 0.978656612030371 0.8210952161720575 0.9153135103662662 0.9552799365478032 0.9783286279892299 1.0 11.2786104959558 -9.397666414078284 1.2745977107934905 0.9886375188401691 0.9221775833610283 0.17257909507538594 0.058492338816659176 0.4809856201630026 1.6192596617915653 0.014482024745043637 0.01173333207588508 4.002520693235691e-10 9.397666414078284 -0.06645993547914086 AGGPAT(ph)PLS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 2 AGGPAT(0.998)PLS(0.501)PT(0.501)R;AGGPAT(1)PLS(0.998)PT(0.002)R 130.69 1.0796e-07 32696000.0 2924.7 2602.6000000000004 2861.1000000000004 3017.1000000000004 3590.3 3110.0 2543.8 2530.0 3154.9 3513.8 3264.9 True False 3221.6133909496575 2821.930235825495 3055.27145119196 3203.4594146687427 3338.129713862597 3084.6731911172137 2640.605701020773 2479.537165253395 3022.310524460281 3291.9380683311388 2863.337997906325 1.1251250789481728 0.9855386398283724 1.0670313645912486 1.1187849345802399 1.165817558494121 1.077299708722033 0.9222123629664348 0.865960346653603 1.0555200003178795 1.1496854617716128 1.0 11.483482265555255 -7.553672634031889 24.454666970575154 1.0049858552718323 1.0900682715215904 0.24750039628106824 0.07916886538448131 174.13312244618302 138285.43494752084 0.011178265251786544 0.01658016633319708 2.7946496208250856e-08 7.553672634031889 0.0850824162497581 AGGPAT(ph)PLSPT(ph)R ddPTM_A549_MK2206_60min_R1 1 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 2 AGGPAT(0.998)PLS(0.154)PT(0.848)R 58.674 0.043858 9783200.0 747.86 844.12 847.24 823.34 874.08 991.08 571.9 564.27 986.88 1118.9 1111.3 True False 874.0804845784635 887.0821024719687 967.3913718524017 1025.0583369611377 745.5039898867747 1095.95542777434 675.806827206494 644.2570005044004 763.3532557235247 866.1397128902009 835.3335396803047 1.0463849983959554 1.0619495810158286 1.1580899435962282 1.2271246014537422 0.8924626565001696 1.3119973947098778 0.809026329129722 0.771257192367695 0.9138304874190398 1.0368788893855336 1.0 9.706208554980252 -7.7779435439483855 24.999980802501288 0.9309331157306892 1.1106207027633883 0.41216886568727773 0.12325588911083023 205.888221818844 311872.0970521222 0.01864020239458318 0.025793721246292686 1.6674639602115428e-08 7.7779435439483855 0.17968758703269916 AGGPAT(ph)PLSPTR ddPTM_A549_MK2206_60min_R1 2 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AGGPAT(1)PLSPTR;AGGPAT(0.999)PLS(0.001)PTR 136.7 2.9317999999999998e-08 69406000.0 5733.6 6372.9 4615.8 4928.2 7442.2 4913.0 4777.7 4653.299999999999 7822.6 7717.0 8247.3 True False 6701.291506938567 6697.253389143258 5270.3898472644305 6135.609221235303 6347.46223862273 5432.8903990145445 5645.746246449494 5312.919525133581 6050.793590125291 5973.724340310737 6199.267796099501 1.0809811299255265 1.080329743676678 0.8501632806668703 0.9897312752153972 1.0239051525756755 0.8763761427491242 0.910711785995392 0.8570237163292739 0.976049718957515 0.9636177266078628 1.0 12.597882111562084 -5.666785428245851 17.20035654357983 0.9625068850417094 1.0807871332076502 0.41099893115912367 0.060264872129869765 1.5198119386831388 272.759158598953 0.008738900937740091 0.03384652674375607 2.1538456217941627e-06 5.666785428245851 0.11828024816594074 AGGPAT(ph)PLSPTR ddPTM_A549_PD325901_60min_R1 2 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AGGPAT(0.994)PLS(0.006)PTR;AGGPAT(0.792)PLS(0.206)PT(0.002)R 138.42 1.6225e-08 73695000.0 13875.0 14855.900000000001 14726.9 15119.2 16217.6 16145.7 16990.6 16019.3 17015.5 17597.4 19998.3 True False 15283.57978576485 16107.858829785595 15726.355994043846 16053.078645805457 15078.531723682727 16014.214772289775 17637.18658061306 15699.782494602252 16300.397707995158 16486.297160808932 17538.63587966861 0.871423518375343 0.9184214177374181 0.8966692792952261 0.9152980172428767 0.8597322977189051 0.9130821166573168 1.0056190630571613 0.895154138686577 0.9293994025436801 0.939998827384313 1.0 14.098248921735218 -14.999999999487322 0.1153714773457058 1.3022951656555577 0.8626918733529388 0.28498999931780955 0.03728677710953658 48.50192732650626 0.3928143182260028 3.4119194955887053 0.14101644695436355 1.0000000011804845e-15 14.999999999487322 -0.43960329230261885 AGGPATPLS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AGGPATPLS(0.962)PT(0.038)R;AGGPATPLS(1)PTR 147.39 5.8857e-12 210570000.0 10266.2 11092.3 9941.4 8928.7 13390.2 11366.0 10064.2 10276.900000000001 15946.300000000001 15817.8 15695.6 True False 11998.883575508014 11656.850690956046 11351.240007711462 11116.231900824578 11420.519317890677 12568.742575859811 11892.734866885108 11733.682046686288 12334.488511008469 12244.547994060797 11797.949343477187 1.017031284520807 0.9880404086834674 0.9621366965766216 0.9422172936325146 0.9680088450460095 1.0653328141986622 1.0080340676712878 0.9945526722551635 1.0454773242290554 1.0378539216928002 1.0 13.526248499382834 -7.22288040305709 24.995221343227005 1.0213528643123722 0.9735943217760992 0.47334839835994724 0.02590638610591574 425.89683835628784 276080.79035046697 0.004105637328900488 0.00711106102678048 5.9857640961717e-08 7.22288040305709 -0.047758542536272985 AGGPS(ph)DDDNADKPK ddPTM_A549_MK2206_60min_R1 1 AGGPSDDDNADKPK 14 1 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein 1 AGGPS(1)DDDNADKPK 139.11 3.8754000000000004e-10 36863000.0 10547.0 11209.0 11663.0 11066.0 12233.0 7716.4 7325.4 8073.1 12663.0 17411.0 19075.0 True False 12327.075750607142 11779.490222490034 13316.988775216652 13777.170496771621 10433.541904957112 8532.944326268233 8656.330358486539 9217.486647831838 9794.850718655762 13477.843007535339 14338.15105678199 0.8597395648706322 0.821548760076586 0.928780058354712 0.960874972108414 0.7276769413042287 0.5951216647443621 0.6037271001125398 0.6428643840707717 0.6831320635321921 0.9399986758516035 1.0 13.807571376170001 -6.765714997948023 24.997026211645434 0.7855050123233759 0.8902256333497535 0.19384595404683125 0.12984598953309856 233.62169819169503 1365859.2945634294 0.024687631495136673 0.04785526306104207 1.71508244652338e-07 6.765714997948023 0.10472062102637758 AGGPT(ph)TPLSPTR ddPTM_A549_MK2206_60min_R1 1 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.5)T(0.5)PLS(0.001)PTR 100.38 0.00025856 46199000.0 2667.7 3551.6 2832.9 2464.5 4283.3 3315.6 2560.1 2778.4 4395.4 4467.3 4757.1 True False 3117.942540996934 3732.361269889878 3234.6478179980513 3068.3026106356074 3653.232244053199 3666.454591282843 3025.2370315288445 3172.246708493142 3399.84891801149 3458.1338273254055 3575.78078071914 0.8719613231910351 1.0437891746650216 0.9045990278373603 0.8580790598741707 1.0216600144370378 1.0253577655130937 0.8460353743834449 0.8871479833434192 0.950799035652217 0.9670989468850846 1.0 11.804042577037961 -9.994005055108449 1.0465792539530323 0.9934872511596373 0.9367042458819322 0.06805097397373505 0.06718167542622686 0.7799744232627374 1.7257719846361765 0.023088543572007368 0.01258511620558712 1.0138995840620171e-10 9.994005055108449 -0.05678300527770508 AGGPT(ph)TPLSPTR ddPTM_A549_PD325901_60min_R1 1 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.5)T(0.5)PLSPTR 105.56 0.00017027 53174000.0 8746.6 9517.5 10477.0 8616.2 9862.9 11082.0 9474.5 9401.4 10464.0 11353.0 11363.0 True False 9634.548393093393 10319.57312666915 11188.032223319055 9148.403105190027 9170.163929157841 10991.751866225395 9835.057282145332 9213.881701744376 10024.23446954021 10636.169642484894 9965.423035991773 0.9667977323488054 1.0355378882961923 1.1226851266535929 0.9180145260415997 0.9201981587774325 1.1029889876753718 0.9869181916938595 0.9245851047634325 1.0059015491199952 1.0673073891665823 1.0 13.282715333978631 -6.266372288166846 24.99609077258742 0.9928398809351542 1.0410600107438694 0.10962400560065155 0.06443995675129537 681.3962426049612 3452794.765488983 0.008241127951458885 0.01973150414313552 5.415364726727377e-07 6.266372288166846 0.04822012980871526 AGGPTT(ph)PLS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 2 AGGPT(0.089)T(0.911)PLS(0.999)PT(0.001)R;AGGPT(0.119)T(0.881)PLS(0.998)PT(0.002)R 147.72 8.5379e-12 51928000.0 6805.799999999999 7806.5 7111.7 6965.5 9600.8 6822.0 7348.1 7585.7 10497.3 10505.900000000001 11245.2 True False 7954.452654165357 8203.817505742569 8120.245997831451 8672.047812693172 8188.535038102851 7543.899511922901 8683.154654652973 8660.99620523194 8119.67831074351 8132.609893335565 8452.706488268666 0.9410539293189908 0.9705551135755719 0.9606681610323711 1.0259492417876954 0.9687471166149619 0.8924833155383924 1.027263240088147 1.0246417780213184 0.9606010006395752 0.9621308754329331 1.0 13.045197639313722 AGGPTT(ph)PLS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 2 AGGPT(0.07)T(0.93)PLS(0.994)PT(0.006)R;AGGPT(0.035)T(0.965)PLS(0.864)PT(0.136)R 114.24 4.4309e-05 80845000.0 4833.7 4141.1 4844.5 4106.9 4688.0 4363.9 4965.5 4901.0 5333.700000000001 5089.2 5064.700000000001 True False 5324.413665618133 4490.085030191715 5173.276902345054 4360.573885553366 4358.73105272202 4328.3618452464325 5154.464819725858 4803.245710239878 5109.543137441382 4767.867043471697 4441.774007778539 1.1987133195641864 1.0108765151780736 1.164687103235214 0.9817189883855024 0.9813041017145193 0.9744669219250018 1.1604518398953296 1.0813800301024592 1.1503383847294864 1.0734150443318584 1.0 12.116920276792534 -5.245819119199695 23.382513762487427 1.06429307034609 1.1987135659678647 0.23979201361383007 0.0712650356904794 1499.0892998417116 2243947.870136441 0.010738155568001369 0.3294529386349253 5.67781033242327e-06 5.245819119199695 0.13442049562177472 AGGPTT(ph)PLSPTR ddPTM_A549_MK2206_60min_R1 1 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.109)T(0.891)PLSPTR 115.92 2.6767e-05 41911000.0 4477.5 4368.5 4429.9 4382.1 5434.0 4166.4 3791.3 3967.7 6326.6 6039.5 6603.5 True False 5233.192535635107 4590.837990627863 5058.126431907078 5455.714696719947 4634.665798376271 4607.285682567512 4480.130134617909 4530.133625571639 4893.635201504188 4675.17275538508 4963.668702671553 1.054299319537279 0.9248880748541852 1.0190298214674736 1.0991294994735576 0.9337177954446868 0.9282016908356056 0.9025844396517856 0.9126583373973819 0.9858907785022657 0.9418784845307668 1.0 12.27719111145931 -5.2251774333633 22.513506107711667 0.9797185116849318 1.0542999552235228 0.12342354197017147 0.057135266594966996 7979.870113091694 4954022.880382415 0.007902358755797938 1.896310542244754 5.954188322398273e-06 5.2251774333633 0.07458144353859097 AGGPTT(ph)PLSPTR ddPTM_A549_PD325901_60min_R1 1 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.337)T(0.662)PLS(0.001)PTR 110.64 8.381299999999999e-05 55338000.0 6215.7 6500.7 6008.0 6518.3 7295.0 7164.3 6125.6 6446.6 6796.0 7266.7 8581.9 True False 6846.713288243505 7048.536803208633 6415.739009038933 6920.920586866615 6782.6243663837695 7105.956316116094 6358.71306005694 6318.017505740135 6510.387753726607 6807.879321857219 7526.380705146337 0.9096953179051793 0.9365107983959716 0.8524334949801333 0.9195549438702024 0.9011800800544135 0.9441398986444084 0.8448566859910531 0.8394496310052512 0.8650090938497144 0.9045356046369238 1.0 12.877740551417782 -10.781790587715404 1.0490224129206183 0.9995051548273816 0.8894798240049976 0.11126976323379656 0.043985404138176996 0.3064354114985884 0.6030085875139302 0.024497864921607344 0.006290390124402942 1.6527585491127068e-11 10.781790587715404 -0.11002533082238397 AGGPTTPLS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPTTPLS(0.994)PT(0.006)R;AGGPTTPLS(1)PTR 182.55 3.8415e-19 357000000.0 12536.400000000001 13500.599999999999 12538.0 11685.9 15425.1 11319.8 11311.6 12003.8 18431.9 16906.3 18105.0 True False 14652.237834446894 14187.722874275049 14316.07693249304 14548.94602459998 13156.088223506413 12517.653722524894 13366.771300277973 13705.37541009574 14257.104079696044 13087.155088064714 13609.028827420068 1.0766556541437344 1.0425228026329845 1.0519543395814095 1.0690657069728682 0.9667176394688024 0.9198050706824704 0.9821987644956718 1.007079607508917 1.047620977256673 0.9616523893090843 1.0 13.732276495924285 -6.73776089819336 24.995778246090275 1.0075704619824681 1.0582194912652871 0.42735492584246326 0.03634266530923687 258.2280886059332 272592.6363982877 0.00587702082610513 0.012228885555357697 1.829106957946899e-07 6.73776089819336 0.050649029282819 AGGPTTPLS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFE5;A0A0D9SFY5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.001)T(0.004)PLS(0.985)PT(0.011)R;AGGPTT(0.004)PLS(0.969)PT(0.027)R 59.935 0.0089987 485220000.0 26844.0 27048.0 29337.0 24892.5 25043.0 28289.0 24063.0 24565.0 33635.0 26306.0 28492.0 True False 29569.18311849165 29327.42988496426 31327.98523771224 26430.05319003072 23284.066073659866 28058.623763188047 24978.730632778846 24075.031804130303 32221.437918863234 24645.034670589965 24987.664625669073 1.1833512079442638 1.1736763048611223 1.2537380226213677 1.0577240244724562 0.9318224180798732 1.1228990057103725 0.9996424638707113 0.9634766659785705 1.289493772289673 0.9862880361085391 1.0 14.608928451425966 -6.266015000314876 24.876546241619135 1.0974182534192227 1.2005972908549947 0.21452792365759943 0.10432758354229346 619.2650256370163 3366803.0488848407 0.018314997539271263 0.04385825899589281 5.419821702843923e-07 6.266015000314876 0.10317903743577195 AGGSAALS(ph)PSK ddPTM_A549_MK2206_60min_R1 4 AGGSAALSPSK 11 0 Q92522 Q92522 H1FX Histone H1x 1 AGGS(0.007)AALS(0.972)PS(0.021)K;AGGS(0.006)AALS(0.973)PS(0.021)K;AGGSAALS(0.995)PS(0.005)K;AGGSAALS(0.755)PS(0.245)K 164.21 1.0495e-13 2764143700.0 30211.0 30911.399999999998 28065.940000000002 26456.72 34451.7 26278.609999999997 28152.1 26538.75 39012.9 37770.100000000006 39524.299999999996 True False 35309.87821196476 32484.658226735533 32046.112316376937 32938.61758768728 29383.90056789103 29059.395067870464 33266.97216331514 30300.69908401326 30176.54044079957 29237.808177526298 29709.32549481351 1.1885116078494937 1.093416214797826 1.078654994101814 1.1086962439937427 0.989046371080377 0.9781236895783276 1.1197484833212623 1.0199053185944253 1.0157262050956903 0.9841289793883228 1.0 14.858628230891274 -2.0000000000003206 0.3497776259170905 1.007803692249275 3.0056047559429633 0.6031924514127138 0.04158613511305477 25.341566975575684 0.3115197281136017 0.01043523867333161 33.89771620224625 0.009999999999992617 2.0000000000003206 1.9978010636936883 AGGSAALS(ph)PSK ddPTM_A549_PD325901_60min_R1 5 AGGSAALSPSK 11 0 Q92522 Q92522 H1FX Histone H1x 1 AGGS(0.04)AALS(0.947)PS(0.013)K;AGGS(0.242)AALS(0.749)PS(0.009)K;AGGS(0.001)AALS(0.997)PS(0.002)K;AGGS(0.004)AALS(0.994)PS(0.002)K;AGGS(0.001)AALS(0.913)PS(0.086)K 156.73 3.3445e-13 3642524500.0 44002.3 45642.3 43687.1 43434.3 50754.9 45740.4 46421.8 45936.2 48123.4 46960.9 51579.8 True False 48469.381103218824 49488.736802665786 46651.96931787362 46117.13806454762 47190.05091889947 45367.90534758131 48188.40700198366 45019.96645474821 46100.94085163142 43995.780759602654 45235.811591291815 1.0714825134816304 1.0940167770128544 1.0313061195713005 1.0194829371299587 1.0432011554311067 1.0029201146534734 1.0652711934820296 0.9952284455843574 1.0191248754008462 0.972587408337162 1.0 15.465177735132542 -2.0000000000136255 0.25272277503836044 1.0046958256327152 1.5272301823399939 0.5509537150040866 0.023549307480318155 22.70369945713051 0.2765125733958637 0.009094009724444631 5.143662772696548 0.00999999999968626 2.0000000000136255 0.5225343567072787 AGGSAALS(ph)PSKK ddPTM_A549_MK2206_60min_R1 5 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGS(0.002)AALS(0.835)PS(0.163)KK;AGGSAALS(0.91)PS(0.09)KK;AGGSAALS(0.874)PS(0.126)KK;AGGS(0.001)AALS(0.735)PS(0.264)KK;AGGS(0.002)AALS(0.499)PS(0.499)KK 107.98 5.0963999999999995e-05 1872834000.0 47998.7 46299.200000000004 45777.799999999996 42034.6 54773.5 45925.7 42828.3 44634.3 61358.1 62902.299999999996 58948.5 True False 56099.707104453104 48655.63152012766 52269.780395619724 52333.07888700489 46716.390708016675 50785.52709098763 50609.64773150533 50961.34871181096 47460.588318751645 48692.626742455344 44309.960554165824 1.2660744086168874 1.098074358713309 1.1796395154024923 1.1810680540559582 1.054309011422142 1.1461424577190917 1.1421731614867627 1.1501104508886728 1.071104278252164 1.0989092775862894 1.0 15.435343422050702 -14.999999999999998 0.042729327235675345 0.2772050968394698 1.5310298191734655 0.3271522775249529 0.056572233314769294 224.01117516814148 0.734469800796345 19.842744888743088 5.723402185213111 1.000000000000004e-15 14.999999999999998 1.2538247223339956 AGGSAALS(ph)PSKK ddPTM_A549_PD325901_60min_R1 3 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.959)PS(0.041)KK;AGGSAALS(0.998)PS(0.002)KK;AGGSAALS(0.992)PS(0.008)KK 132.97 4.3728999999999994e-08 1646785000.0 16577.399999999998 15588.2 15694.7 16653.1 18073.8 14984.0 17650.5 17344.5 16361.2 16276.1 17486.5 True False 18260.325444363134 16901.872320792667 16759.836721898017 17681.72416506581 16804.35863922508 14861.975271929357 18322.1994362242 16998.55034100298 15673.595661605614 15248.424268303403 15335.771356056524 1.190701466552031 1.1021207820836247 1.0928590634783486 1.1529725994566817 1.0957622051784548 0.96910516770713 1.1947360853804234 1.1084248679992075 1.022028517360209 0.9943043564144802 1.0 13.90461311241265 -8.002181844405948 0.21779495137490856 0.9685973075761388 1.1803667879974666 0.3942171633445264 0.0582863201968227 2.0737923463848933 0.3147024574796615 0.09451566431482827 0.15402912255072645 9.949887161860626e-09 8.002181844405948 0.21176948042132782 AGGSAALS(ph)PSKKR ddPTM_A549_MK2206_60min_R1 2 AGGSAALSPSKKR 13 2 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.991)PS(0.009)KKR;AGGSAALS(0.99)PS(0.01)KKR 147.12 3.0081999999999997e-13 114794000.0 10396.3 14306.8 16483.8 12506.4 21543.3 13848.9 12437.1 8395.1 26303.2 26999.6 29179.4 True False 12150.9412748684 15034.955010716425 18821.450705042964 15570.468561433625 18374.309108236946 15314.381405844188 14696.760081570004 9585.131133915484 20345.567197579247 20900.37160796341 21933.34966952893 0.5539938704277891 0.6854837604492235 0.8581202136758348 0.7098992536951625 0.837733833868686 0.6982235562094652 0.6700645502400205 0.4370117322860037 0.9276087558046129 0.9529037708726912 1.0 14.42083853732405 -8.96473096160036 21.642098217760182 0.9680633213885284 0.6929911896900771 0.5570205784595549 0.11086797269721017 21.525736292930034 13208.981941391761 0.01953646182250443 0.02069199913510086 1.084598597220941e-09 8.96473096160036 -0.27507213169845124 AGGSAALS(ph)PSKKR ddPTM_A549_PD325901_60min_R1 2 AGGSAALSPSKKR 13 2 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.913)PS(0.087)KKR;AGGSAALS(0.656)PS(0.344)KKR 113.65 4.389e-06 81257000.0 8182.799999999999 8565.8 9490.5 11452.7 10121.5 21702.5 16074.3 16908.0 14610.2 11828.3 13457.400000000001 True False 9013.511832141017 9287.670027677717 10134.58240101265 12160.107268031137 9410.600757279419 21525.762035440952 16686.016282694472 16570.75667593059 13996.184102339099 11081.45911936969 11802.225113487255 0.7637129223912723 0.7869422874390039 0.8587009910047497 1.0303232781193865 0.7973581817656779 1.8238731958130427 1.4138025772467393 1.4040366555111703 1.1858936740957982 0.9389296520624832 1.0 13.526771260963962 AGGSAALSPS(ph)K ddPTM_A549_MK2206_60min_R1 1 AGGSAALSPSK 11 0 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.371)PS(0.629)K 74.944 0.0013635 3301500.0 1188.0 855.69 1259.1 656.08 1416.1 1297.5 1127.4 812.52 1666.7 1477.2 1547.3 True False 1388.5053561886118 899.2409660525022 1437.6593129448065 816.8196294525503 1207.793565896326 1434.800588789206 1332.2339866980262 927.6971982381395 1289.1951111729884 1143.4994940400443 1163.0627066924644 1.193835335101806 0.773166365732573 1.2360978515365213 0.7023005937276027 1.038459542160945 1.2336399237402373 1.1454532752465718 0.797633001986917 1.108448498739351 0.9831795718839148 1.0 10.183713166679963 -6.973352724919787 24.997043935254894 1.0539488359524312 0.9666391297478658 0.029865174083532287 0.17806572473800628 552.4244850996848 518211.2031437178 0.023456413990661243 0.04432772784121601 1.0632790943385362e-07 6.973352724919787 -0.08730970620456535 AGGSAALSPS(ph)K ddPTM_A549_PD325901_60min_R1 1 AGGSAALSPSK 11 0 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.382)PS(0.618)K 65.179 0.0058144 6806200.0 2556.5 4022.6 3201.3 4866.0 3776.3 3448.4 3235.7 3314.5 5588.0 3881.0 3771.7 True False 2816.0339980041713 4361.598619315928 3418.5594689807467 5166.561768512182 3511.0657155277654 3420.317373713375 3358.836334142981 3248.38969732505 5353.155792793454 3635.9529976643985 3307.8048107762206 0.851330159757326 1.3185779901844996 1.0334828275972354 1.561930665219566 1.061448881170182 1.034014269091879 1.0154276102388233 0.9820379022191372 1.6183408934390129 1.0992042171953833 1.0 11.691658390140622 AGGSAALSPS(ph)KK ddPTM_A549_MK2206_60min_R1 1 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.254)PS(0.746)KK 131.69 5.107e-08 23673000.0 2206.3 2342.6 2662.0 2484.6 2842.1 2295.0 2408.7 2555.1 3198.8 3079.8 3589.3 True False 2578.669501143884 2461.828333946398 3039.5116281940072 3093.3271115379316 2424.0308549071046 2537.8553767022954 2846.3296112821845 2917.293249665573 2474.2769074339435 2384.0710409860058 2697.977750359506 0.9557786385748644 0.9124716961132681 1.12658884150879 1.1465354416379991 0.8984621369038726 0.940650965844372 1.054986317401213 1.0812888465358335 0.9170857347152865 0.8836511126410616 1.0 11.397662735402545 -8.777574527713353 24.99905460064948 0.9608460487106416 1.0143328149619055 0.13377836745977156 0.0843591599502059 502.3854089383154 778369.6220744642 0.015010812088157147 0.01600496267843305 1.6688813919057436e-09 8.777574527713353 0.05348676625126392 AGGSAALSPS(ph)KK ddPTM_A549_PD325901_60min_R1 1 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.366)PS(0.634)KK 126.48 6.3285e-07 1678200000.0 18818.0 20485.0 19926.0 19578.0 23029.0 21037.0 20846.0 21099.0 22059.0 21269.0 22831.0 True False 20728.389506920586 22211.342842113758 21278.29818477192 20787.28859513595 21411.522485737063 20865.681646795118 21639.3059373689 20678.163893154688 21131.936942238848 19926.071710209748 20022.9317376334 1.0352324913519666 1.109295238737053 1.0626964354465156 1.0381740729838242 1.0693500215801957 1.042089236491665 1.0807261504416708 1.032724086767462 1.0553867545041398 0.995162545191042 1.0 14.289365607154057 -13.463225334765648 0.21279033579322237 0.8531042304713651 1.0699731124925824 0.5601794760615222 0.021136606385550476 13.03705068813116 0.2797372732775416 0.8383693310216356 0.015884284690766266 3.4417131029326433e-14 13.463225334765648 0.21686888202121735 AGGSPAPGPETPAIS(ph)PSKR ddPTM_A549_MK2206_60min_R1 1 AGGSPAPGPETPAISPSKR 19 1 P33316;H0YKI0 P33316 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 AGGSPAPGPET(0.215)PAIS(0.597)PS(0.188)KR 60.735 0.0011924000000000001 15193000.0 3969.2 4736.1 5196.6 3627.4 6205.4 5212.1 4725.7 5169.5 7333.5 7273.9 7290.1 True False 4639.103922376966 4977.147260481319 5933.556020688578 4516.113162840173 5292.593880243676 5763.640962488034 5584.298519548395 5902.292455929779 5672.473959193078 5630.720938057052 5479.766973475564 0.8465878101810224 0.908277173933282 1.0828117417053589 0.8241432865120194 0.9658428735860692 1.0518040256796581 1.0190759108149687 1.0771064690340704 1.0351670037522216 1.02754751530716 1.0 12.419898828694743 -7.005236617765458 24.90415293306247 1.0238158944946236 0.9229084462471988 0.4250143145639783 0.06446859141419523 185.050940860541 880068.1014523861 0.008934521312666045 0.016536506894185333 9.880146454596054e-08 7.005236617765458 -0.10090744824742481 AGGT(ph)LGR ddPTM_A549_MK2206_60min_R1 4 AGGTLGR 7 0 Q9BYN0 Q9BYN0 SRXN1 Sulfiredoxin-1 1 AGGT(1)LGR;AGGT(1)LGR;AGGT(1)LGR;AGGT(1)LGR 101.33 0.011632 323759000.0 21742.7 19893.199999999997 17195.7 16505.6 24823.699999999997 21084.899999999998 17886.2 19140.2 28035.199999999997 31370.5 29645.5 True False 25412.33620202198 20905.678909272803 19634.308829803053 20549.472740964546 21172.166613756537 23316.090122976133 21135.891017277132 21853.38196440415 21685.2719630149 24283.88226224152 22283.704175823328 1.1403999982010646 0.9381599551099045 0.8811061516022667 0.9221749031859643 0.9501188153775281 1.0463291892141025 0.9484909174215518 0.9806889281950685 0.973144850241833 1.0897596768758169 1.0 14.443701448488856 AGGT(ph)LGR ddPTM_A549_PD325901_60min_R1 4 AGGTLGR 7 0 Q9BYN0 Q9BYN0 SRXN1 Sulfiredoxin-1 1 AGGT(1)LGR;AGGT(1)LGR;AGGT(1)LGR;AGGT(1)LGR 84.743 0.01475 402088000.0 21538.1 19597.5 22299.6 22765.8 25458.1 22421.399999999998 22288.9 22832.9 25219.899999999998 25734.7 27073.699999999997 True False 23724.63205648879 21249.050102432222 23812.984954388234 24171.991761116853 23670.010881677135 22238.807552191472 23137.116286454064 22377.47989743647 24159.99530756471 24109.80665008861 23743.80653432462 0.9991924429721026 0.8949302240866089 1.002913535366101 1.0180335543996806 0.9968920041299695 0.9366150924470563 0.9744484841976155 0.9424554510704527 1.017528308809223 1.0154145509581578 1.0 14.535263621520249 -8.780733034058946 24.999080317677876 1.008277260058892 0.9706758383317604 0.2171125017856287 0.033972851442314836 279.3233376253636 361921.81282541266 0.0058416580817954675 0.00622353657593828 1.6567880976953806e-09 8.780733034058946 -0.037601421727131656 AGHDDVPPLS(ph)PLLPPMQNNQIQR ddPTM_A549_MK2206_60min_R1 4 AGHDDVPPLSPLLPPMQNNQIQR 23 0 O14544 O14544 SOCS6 Suppressor of cytokine signaling 6 1 AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR 89.92299999999999 3.2708e-07 50806200.0 7725.0 8031.4 7552.7 7473.6 11841.899999999998 8804.0 8722.1 9164.2 13586.400000000001 12486.7 14149.5 True False 9028.791141883017 8440.163955117006 8623.786429098762 9304.632335502649 10099.972196870076 9735.633436377782 10306.792669308898 10463.25341418546 10509.102093022548 9665.945797610213 10635.78864366641 0.8489065968097855 0.7935625874008982 0.8108271721095368 0.8748417862782124 0.9496213713201783 0.9153654479750621 0.9690670823405814 0.9837778621537675 0.9880886547403042 0.9088132644838014 1.0 13.376639392643296 -6.858037590631862 0.7471553442013246 0.9943640074383524 0.8004357667037137 0.7551820853009842 0.03434276158656033 0.14508941688475155 0.14570479218111965 0.003931382728761612 0.015016969436017375 1.386635802544011e-07 6.858037590631862 -0.19392824073463866 AGHDDVPPLS(ph)PLLPPMQNNQIQR ddPTM_A549_PD325901_60min_R1 2 AGHDDVPPLSPLLPPMQNNQIQR 23 0 O14544 O14544 SOCS6 Suppressor of cytokine signaling 6 1 AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR 72.082 6.4434e-05 18583700.0 6379.3 6166.9 6992.3 6963.6 7618.5 7049.3 7701.4 6559.9 7616.200000000001 8024.2 8240.8 True False 7026.921839807552 6686.606305737434 7466.839526115662 7393.725756516941 7083.402842398185 6991.89283798797 7994.48099136778 6429.057648358004 7296.117600048946 7517.5506425814565 7227.2338427352815 0.9722837246882386 0.9251957873839548 1.0331531660098738 1.0230367409446721 0.9800987482255507 0.9674369184852275 1.1061605540000239 0.8895599323689252 1.0095311371975193 1.0401698362282823 1.0 12.8192278592276 -5.756645596282826 24.99969090979922 1.0022698591842532 0.9487397553869489 0.1505409619892969 0.05151316508137268 153.9270140870048 802703.2813742759 0.0061275476768107105 0.022304565046551678 1.7512752245641646e-06 5.756645596282826 -0.053530103797304274 AGIIASAR ddPTM_A549_MK2206_60min_R1 1 AGIIASAR 8 0 P13639 P13639 EEF2 Elongation factor 2 0 61.357 0.030112 7566400.0 3675.5 4052.6 3716.1 2699.6 4659.2 4535.0 3745.2 4602.3 4880.0 5363.7 5282.9 False True 4295.83454265256 4258.860029945861 4243.098858576918 3361.0021211896487 3973.837852004921 5014.890689910632 4425.65436134597 5254.690118952631 3774.6877917586735 4152.036444748565 3971.0101293773787 1.081798938479694 1.0724878283333956 1.0685187698683107 0.8463846758599495 1.0007120915171237 1.2628753205162249 1.1144908265544706 1.3232628343298944 0.9505611088306423 1.0455869689256043 1.0 11.955290325600991 AGIIASAR ddPTM_A549_PD325901_60min_R1 1 AGIIASAR 8 0 P13639 P13639 EEF2 Elongation factor 2 0 94.006 0.007051699999999999 2514500.0 1187.8 1295.2 1221.3 1402.8 1687.5 1283.1 1479.7 1418.7 1459.4 1376.9 1811.9 False True 1308.384581587856 1404.3510495047951 1304.184762273509 1489.447770010047 1568.9758215589598 1272.65085901045 1536.0107932229091 1390.4029155513806 1398.066493200209 1289.9622990167763 1589.0477865804362 0.8233764853626236 0.8837689220957283 0.8207335067500139 0.9373209431387055 0.9873685579559124 0.8008889787695692 0.9666234119543626 0.8749912540663545 0.8798140024528709 0.8117832011790663 1.0 10.633946795393822 -14.999999999277085 0.2328506029606247 1.6497414052638286 0.873298562016448 0.0 0.08026058403486222 34.85279028490821 0.4381925699490367 10.38586606659855 0.032381371671107585 1.0000000016645735e-15 14.999999999277085 -0.7764428432473807 AGIPQHHPPMAQNLQYPDDS(ph)DDEKK ddPTM_A549_MK2206_60min_R1 1 AGIPQHHPPMAQNLQYPDDSDDEKK 25 1 Q15223 Q15223 PVRL1 Nectin-1 1 AGIPQHHPPMAQNLQYPDDS(1)DDEKK 118.43 1.4514e-17 4642400.0 1214.2 857.19 893.64 971.27 1357.9 1400.7 935.57 1143.6 1252.8 1427.3 1456.6 True False 1419.1272756601113 900.8173096454846 1020.3715895639723 1209.2311936019673 1158.1547087992533 1548.92114429059 1105.550958785766 1305.708802128116 969.042800310505 1104.8719386970988 1094.886019885118 1.2961415616659482 0.8227498509296919 0.9319432078153996 1.1044356870396856 1.057785639568924 1.4146871146031366 1.009740684150636 1.1925522642668493 0.8850627213343931 1.009120509925799 1.0 10.09656497448359 -8.770399551288081 24.999100610993192 0.9457240619207653 1.0943816769487995 0.12913061364181422 0.15735295637245994 260.827275315933 727712.4558990124 0.027005689428840317 0.028952280749577432 1.696681985352932e-09 8.770399551288081 0.1486576150280342 AGIPQHHPPMAQNLQYPDDS(ph)DDEKK ddPTM_A549_PD325901_60min_R1 2 AGIPQHHPPMAQNLQYPDDSDDEKK 25 1 Q15223 Q15223 PVRL1 Nectin-1 1 AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQY(0.001)PDDS(0.999)DDEKK 117.54 1.6007e-17 14925500.0 2802.73 2735.2 2765.2400000000002 2655.88 3381.4 3402.5 2548.0 3308.7 3750.0 2891.85 3582.3 True False 3087.2610863392233 2965.704903185233 2952.9058151389495 2819.927675658886 3143.9021291967215 3374.7911680952807 2644.9655343190993 3242.7053828750627 3592.4005409762763 2709.2580974737903 3141.6998100706965 0.982672207078165 0.9439809919708709 0.9399070546693962 0.8975802419504333 1.0007009960400945 1.0741927530050488 0.8418899621920214 1.0321499757808157 1.1434576051667513 0.8623542226374661 1.0 11.61732962213308 -8.510079701223729 24.73101201704601 1.0687996569692808 0.9561848035464553 0.0 0.0886503719860878 456.81154151618773 882677.6954736947 0.011989606752398144 0.014147368934727792 3.0897283570868378e-09 8.510079701223729 -0.11261485342282551 AGKEPAKPS(ph)PSR ddPTM_A549_MK2206_60min_R1 4 AGKEPAKPSPSR 12 2 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 AGKEPAKPS(0.635)PS(0.365)R;AGKEPAKPS(0.938)PS(0.062)R;AGKEPAKPS(0.824)PS(0.176)R;AGKEPAKPS(0.795)PS(0.205)R 66.436 0.0017477 174117000.0 17070.2 17873.800000000003 15845.100000000002 15838.499999999998 22142.800000000003 18163.2 16572.2 16971.8 25388.600000000002 25164.300000000003 25353.300000000003 True False 19951.232433679146 18783.500074827592 18092.17344098305 19718.933211017287 18885.623452389795 20085.21776824362 19583.154225968643 19377.604623957654 19638.12263726317 19479.667152634636 19057.375894516943 1.046903442746248 0.9856288808487979 0.9493528144233333 1.0347139774207152 0.9909876132434076 1.0539340714805547 1.027589230246698 1.0168034010145566 1.030473594368956 1.0221589404782214 1.0 14.21806186057081 AGKEPAKPS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 AGKEPAKPSPSR 12 2 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 AGKEPAKPS(0.988)PS(0.012)R;AGKEPAKPS(0.896)PS(0.104)R;AGKEPAKPS(0.835)PS(0.165)R 60.208999999999996 0.0029035 184347000.0 10163.7 10551.9 9580.7 10041.0 11321.4 11699.3 10897.4 11875.0 10846.1 11283.300000000001 12515.6 True False 11195.511341879523 11441.145644896265 10230.903915429304 10661.209765234453 10526.22392070969 11604.024779690548 11312.106520286085 11638.143809242723 10390.276135328746 10570.87051237998 10976.260542925165 1.019974999508888 1.0423536868638514 0.9320937559216115 0.9712970754968293 0.9589990944133018 1.0571929059364404 1.030597485914945 1.0603013443175036 0.9466134750259623 0.9630666538062015 1.0 13.422099011756346 -11.085633194505316 0.0026553072398257794 0.00046997703527378064 1.9657760249778693 0.0 0.04404852870882575 224940.36246922894 117.66268378450286 44202.411783829855 42890.87418513117 8.210447066345492e-12 11.085633194505316 1.9653060479425954 AGKEPAKPSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 AGKEPAKPSPSR 12 2 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 AGKEPAKPS(0.436)PS(0.564)R 57.52 0.0028891999999999998 87713000.0 9178.0 7976.8 8623.3 8706.1 10622.0 9434.1 9022.9 10359.0 9511.0 9732.2 10341.0 True False 10109.743803513511 8649.03293058203 9208.52899411541 9243.856024012317 9875.947363910684 9357.27181746589 9366.271397020337 10152.381618521706 9111.285745393438 9117.707231092354 9069.122556999995 1.1147433216359297 0.9536791322669117 1.0153715462812678 1.019266854749631 1.0889639324906841 1.0317725621916407 1.0327648940845977 1.1194447483439947 1.0046490923601974 1.005357152666865 1.0 13.1467472605647 -8.953021118873075 24.999826469730028 1.0020507984236657 1.0435604324706866 0.15239446752453123 0.04534813375260064 162.07515309904358 86248.4458234983 0.007518698963626657 0.008002001093582517 1.1142403489920177e-09 8.953021118873075 0.041509634047020905 AGKES(ph)DEKEQEQDKDR ddPTM_A549_MK2206_60min_R1 2 AGKESDEKEQEQDKDR 16 3 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 AGKES(1)DEKEQEQDKDR;AGKES(1)DEKEQEQDKDR 79.568 9.5735e-05 37386000.0 8990.5 8142.5 6793.4 7294.3 4567.299999999999 2596.8 2067.79 2631.6000000000004 3229.5 10626.1 9281.4 True False 10507.876603378545 8556.91847057054 7756.806271590222 9081.403827453565 3895.4562202657225 2871.5916523836668 2443.4806770927025 3004.6373589369978 2498.0234064517695 8225.656629853042 6976.572226391417 1.5061661031227753 1.2265218782084544 1.1118363029694278 1.301699965650733 0.558362487172389 0.4116049485621075 0.35024086296266665 0.43067530320561526 0.35805884686495315 1.1790398440564422 1.0 12.768302661118675 -6.7602217113827185 24.999834577265077 0.6132736557423312 1.2697880246230215 0.6016876428711375 0.26366489610304 19.166154676158932 393481.972599737 0.04121649548934958 0.08218894716969488 1.736913891635759e-07 6.7602217113827185 0.6565143688806904 AGKES(ph)DEKEQEQDKDR ddPTM_A549_PD325901_60min_R1 1 AGKESDEKEQEQDKDR 16 3 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 AGKES(1)DEKEQEQDKDR 79.51100000000001 9.646399999999999e-05 32673000.0 2957.6 2763.2 2454.0 2492.3 2844.7 2136.9 2424.6 2171.0 2155.4 2971.5 2965.6 True False 3257.8533747299552 2996.064561451245 2620.5431971007893 2646.243710576021 2644.898085682237 2119.4977948869378 2516.869479792028 2127.6977018834477 2064.8160336054043 2783.8789828806366 2600.850000487302 1.252611021058329 1.1519559224445448 1.007571830982101 1.0174534133380293 1.016936034445155 0.8149250416170956 0.9677103559684183 0.8180778212833484 0.7939004683924621 1.0703727559678726 1.0 11.344767481408068 -5.4896316453893155 0.6784109233691069 0.8951206306258819 1.4105940911965285 0.5915235283676799 0.08675040895790229 1.1222442353838007 0.42408960244348676 0.014774375199929283 0.4165595221837229 3.2386823508892793e-06 5.4896316453893155 0.5154734605706466 AGKLS(ph)PLK ddPTM_A549_MK2206_60min_R1 1 AGKLSPLK 8 1 Q03164-2;Q03164;Q03164-3;E9PR05;H0YNL8;P48200-2;P48200 Q03164-2;H0YNL8 KMT2A;IREB2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Iron-responsive element-binding protein 2 1 AGKLS(1)PLK 58.37 0.004113 146710000.0 8010.9 7395.3 7238.9 6363.8 9713.7 7755.7 8062.6 7425.4 10485.0 10138.0 9909.6 True False 9362.944072299108 7771.689182119778 8265.484870523522 7922.9312856818415 8284.827597660584 8576.403026183005 9527.470056015176 8477.973189333785 8110.1642411044495 7847.818758853211 7448.772828953433 1.2569780670320991 1.0433516178545768 1.1096438380286646 1.0636559158960186 1.112240604983602 1.1513846942474155 1.2790657299927086 1.1381704589485993 1.0887919966601993 1.053572036503608 1.0 12.862787048570716 -9.617318080911547 1.0010607363134918 1.0162552985481283 1.1381903551046937 0.28221289564667107 0.06964634755858246 0.3797221497011583 0.7930552206772623 0.021027996367383887 0.014193532725758042 2.4136923784188003e-10 9.617318080911547 0.12193505655656534 AGKLS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 AGKLSPLK 8 1 Q03164-2;Q03164;Q03164-3;E9PR05;H0YNL8;P48200-2;P48200 Q03164-2;H0YNL8 KMT2A;IREB2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Iron-responsive element-binding protein 2 1 AGKLS(1)PLK;AGKLS(1)PLK 46.843999999999994 0.010817 640950000.0 17566.6 15716.6 17457.9 17039.5 19892.3 16331.300000000001 18836.3 17832.1 19122.1 16998.0 18545.3 True False 19349.948300152577 17041.093039412488 18642.69807688094 18091.99121548773 18495.1334727095 16198.303307425256 19553.125704118862 17476.424776488162 18318.464635893986 15924.743379103164 16264.34566834272 1.1897157558459757 1.047757677247456 1.1462310539284404 1.1123712926676406 1.137158164850667 0.9959394394177191 1.2022079524648506 1.0745236932897129 1.1262958258166789 0.9791198308149239 1.0 13.989425161963792 -10.784763269914443 0.7477383180586692 0.9896137137387909 1.113650211153204 0.4128884386045736 0.05704182250438185 0.6861532756984816 0.585915374754335 0.053350867514336854 0.009722210398051602 1.641484287965951e-11 10.784763269914443 0.12403649741441314 AGKLS(ph)PLKVQPK ddPTM_A549_MK2206_60min_R1 2 AGKLSPLKVQPK 12 2 H0YNL8;P48200-2;P48200 H0YNL8 IREB2 Iron-responsive element-binding protein 2 1 AGKLS(1)PLKVQPK;AGKLS(1)PLKVQPK 58.751999999999995 0.0023525 10843400.0 4013.5 4891.2 4725.9 4505.8 6033.6 4227.1 4688.5 3205.6 7230.6 6691.3 7224.8 True False 4690.880679345952 5140.141187995656 5396.103682825722 5609.721202273047 5146.065432661591 4674.408916278112 5540.3397610729935 3660.003616738272 5592.88064489555 5179.730682690321 5430.682765663878 0.8637736508942465 0.9464999908473378 0.993632645409379 1.0329679423996483 0.9475908747972147 0.8607405584123979 1.0201921195070416 0.6739490731955602 1.0298669405359464 0.9537899572112313 1.0 12.406917875088485 AGKLS(ph)PLKVQPK ddPTM_A549_PD325901_60min_R1 2 AGKLSPLKVQPK 12 2 H0YNL8;P48200-2;P48200 H0YNL8 IREB2 Iron-responsive element-binding protein 2 1 AGKLS(1)PLKVQPK;AGKLS(1)PLKVQPK 48.111999999999995 0.006984999999999999 14957100.0 5126.299999999999 5047.6 6890.4 6427.700000000001 7007.5 8548.099999999999 7010.2 7263.200000000001 7920.0 7244.0 7532.4 True False 5646.718202217397 5472.978966553739 7358.023979341187 6824.72443063415 6515.317374562615 8478.487107713521 7276.976997128633 7118.329778129829 7587.1499425419 6786.612603731226 6605.962551817696 0.8547911311824871 0.828490764763387 1.1138458508694624 1.033115821820131 0.9862782786696029 1.283459759453311 1.1015770888871146 1.077561327708579 1.1485305711359535 1.0273465146822278 1.0 12.68955307589315 -5.758788097986746 24.96703340005459 1.0823842873251466 0.841640852519699 0.5888373005821634 0.0786326799383059 35.79428724765993 337052.3688992746 0.011543394425187082 0.04098156422054828 1.7426569473792555e-06 5.758788097986746 -0.24074343480544758 AGKPGLPAPDELVY(ph)QVPQSTQEVSGAGR ddPTM_A549_PD325901_60min_R1 1 AGKPGLPAPDELVYQVPQSTQEVSGAGR 28 1 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 1 AGKPGLPAPDELVY(0.874)QVPQS(0.103)T(0.022)QEVS(0.001)GAGR 84.365 1.4069e-06 3556200.0 2273.9 2551.7 3070.0 2375.7 3191.8 3328.8 3191.2 2581.0 3213.5 3145.6 3228.4 True False 2504.744654043293 2766.7407141919275 3278.348661409708 2522.441593393831 2967.6189791122288 3301.6913564601236 3312.642862291646 2529.519930244669 3078.447770247272 2946.986279168547 2831.3272665137592 0.8846538807671673 0.9771885952268041 1.1578840426477333 0.8909042847949322 1.0481370395469285 1.1661284781555925 1.1699964541261016 0.8934042913941529 1.0872807981811987 1.040849750582595 1.0 11.467262801298288 -5.522738843592603 24.999935462291297 1.0460332494542017 0.9077875169763289 0.22284716887994405 0.09246513572499362 4.552850423960193 813226.9931323283 0.012184591608579572 0.048259725104118585 3.0009665622956604e-06 5.522738843592603 -0.13824573247787286 AGKPGLPAPDELVYQVPQSTQEVS(ph)GAGR ddPTM_A549_MK2206_60min_R1 1 AGKPGLPAPDELVYQVPQSTQEVSGAGR 28 1 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 1 AGKPGLPAPDELVY(0.008)QVPQS(0.321)T(0.321)QEVS(0.351)GAGR 46.696000000000005 0.003593 1732600.0 697.8 865.2 822.72 757.03 1210.2 545.17 914.64 768.85 953.23 894.7 1624.4 True False 815.5715804279571 909.2349844320086 939.3940671479243 942.502383984368 1032.1811831422458 602.8595275454425 1080.8182487080746 877.8368420043737 737.3249269955169 692.5866486038638 1221.0166488407158 0.667944684621864 0.7446540432477102 0.7693540198979467 0.7718996992213162 0.8453457077118823 0.4937357145112006 0.8851789611011845 0.7189392895156906 0.6038614851775886 0.567221298138264 1.0 10.253867156597709 -10.943978255097342 1.1835315128493162 1.0012031101692072 0.7163364595904781 0.0 0.1630101868777955 0.31335587510740154 0.7747129536562354 0.0730431213770134 0.016782810621828598 1.1376842476659868e-11 10.943978255097342 -0.28486665057872906 AGLAPLEVR ddPTM_A549_PD325901_60min_R1 2 AGLAPLEVR 9 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 138.9 0.0001177 8858000.0 2692.6000000000004 2976.4 2645.8 2727.3 3279.3 3331.3 2677.2 3052.8 3203.6 3157.1000000000004 3619.1 False True 2965.9507698126476 3227.2316736767066 2825.3598984878845 2895.759126852298 3048.9732809708435 3304.1709972889944 2779.082311020054 2991.9095091247295 3068.9638328190945 2957.760167205943 3173.97364336512 0.9344597980555623 1.0167796069834787 0.8901648898043062 0.912345045115796 0.9606170761198419 1.0410203009076773 0.8755845584381119 0.9426384227792888 0.966915348914274 0.9318792465050395 1.0 11.63207443276451 -9.672006551525735 0.8889852953843581 0.9951606376528592 0.9479956827334937 0.0 0.05032585486145024 0.7186389085169048 1.1916175024131035 0.015346105888792011 0.00949303433110408 2.1281069422992807e-10 9.672006551525735 -0.047164954919365565 AGLAS(ph)PEEEDAVGKEPLK ddPTM_A549_MK2206_60min_R1 2 AGLASPEEEDAVGKEPLK 18 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 AGLAS(1)PEEEDAVGKEPLK;AGLAS(1)PEEEDAVGKEPLK 174.2 5.186600000000001e-31 100153000.0 6495.4 6572.700000000001 6048.8 5728.6 7282.7 5795.3 5723.6 6265.299999999999 7996.5 7932.3 8816.9 True False 7591.6647227167505 6907.222355728461 6906.610795123941 7132.107257166628 6211.424477334354 6408.554799391199 6763.504032521573 7153.425461676537 6185.305517786523 6140.387920778392 6627.420395939247 1.1454931586003378 1.042218833735167 1.0421265564133761 1.076151327526561 0.9372310953957619 0.9669757487117987 1.0205334245381064 1.07936799453066 0.9332900507679252 0.9265125122499744 1.0 12.694231721188284 -2.0000000077582643 0.40377816297623825 0.975958687567929 3.6499322377921035 0.48554165139074046 0.04811617644786508 39.92769239281805 0.4617429355622618 0.010915244487163998 86.2353354463438 0.009999999821359365 2.0000000077582643 2.6739735502241744 AGLAS(ph)PEEEDAVGKEPLK ddPTM_A549_PD325901_60min_R1 2 AGLASPEEEDAVGKEPLK 18 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 AGLAS(1)PEEEDAVGKEPLK;AGLAS(1)PEEEDAVGKEPLK 205.96 7.347100000000001e-50 183796000.0 15012.099999999999 16977.699999999997 15138.3 16515.3 17646.6 16411.0 9889.9 18154.9 16280.2 17438.5 17278.7 True False 16536.11734067608 18408.47036224334 16165.676071993012 17535.41257203232 16407.16369346509 16277.354257049716 10266.265556460941 17792.786277256484 15595.999809920542 16337.430133926964 15153.529438703788 1.0912386719915566 1.214797545133352 1.0667927981651646 1.157183390375376 1.0827288625948341 1.07416257861852 0.6774834600736489 1.1741677969629796 1.029199162677352 1.0781270594426249 1.0 13.887366233358984 -7.317111855691817 3.5958076346628998 1.0019835123502634 1.1282439343531732 0.20039237463522774 0.12038140551129144 0.2886321760178852 7.5714872898755825 0.016832869099197886 0.028136915437907212 4.818236844602381e-08 7.317111855691817 0.12626042200290977 AGLES(ph)GAEPGDGDS(ph)DTTK ddPTM_A549_MK2206_60min_R1 2 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 AGLES(1)GAEPGDGDS(0.982)DT(0.016)T(0.002)K;AGLES(1)GAEPGDGDS(0.97)DT(0.016)T(0.014)K 135.27 9.8695e-13 3560000.0 1196.51 1397.74 1068.0 862.02 1262.19 1207.6100000000001 893.5699999999999 899.03 1443.5300000000002 1451.76 1584.52 True False 1398.4516361390872 1468.8789957697588 1219.4584593956436 1073.2149386975484 1076.5235230129824 1335.398488653359 1055.9201024425713 1026.470255663904 1116.57275984373 1123.8064077088911 1191.0399534727233 1.1741433459571295 1.2332743259257914 1.0238602456954196 0.9010738351542015 0.9038517304765096 1.121203772182225 0.886553049176745 0.8618268872265936 0.937477165722385 0.9435505538098878 1.0 10.218006093926393 -5.8755031291489725 4.216955614972674 0.9585164293050901 1.2032680311803656 0.6705724818088984 0.06880428544816591 0.09378787395004318 2.944717803221667 0.009564952478592575 0.032733747273678934 1.33197744520557e-06 5.8755031291489725 0.24475160187527556 AGLES(ph)GAEPGDGDS(ph)DTTK ddPTM_A549_PD325901_60min_R1 1 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 AGLES(1)GAEPGDGDS(0.539)DT(0.413)T(0.048)K 153.86 1.6259e-18 5044200.0 894.01 1265.4 1164.3 906.44 1191.3 900.09 1009.6 1184.2 1025.7 1225.2 964.02 True False 984.7692370646233 1372.0396989216858 1243.3163995046646 962.4287401253976 1107.6271977618892 892.7599654638884 1048.020880474318 1160.5802020130711 982.5933959678321 1147.8406629060605 845.4516514262772 1.1647848051432832 1.622848209719686 1.4705943236460528 1.1383604710000625 1.3101011700590115 1.0559562619078242 1.2395988330099141 1.3727339701272947 1.162211220842962 1.3576656464857015 1.0 9.723578443828131 -4.796178151834476 0.03630530148339035 6.004607493142963e-11 2.831443666391157 0.0 0.1819573921804491 277.3570273043058 1.3060924117600465 36.80657050938488 69.35127801064681 1.5989020088643286e-05 4.796178151834476 2.831443666331111 AGLES(ph)GAEPGDGDSDT(ph)TK ddPTM_A549_PD325901_60min_R1 1 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 AGLES(1)GAEPGDGDS(0.1)DT(0.767)T(0.132)K 136.43 1.0223e-12 4702900.0 1252.2 1289.4 1304.9 1261.3 1579.6 1339.8 1109.0 1289.1 917.8 1312.6 1238.4 True False 1379.322422179081 1398.0622631496929 1393.4583610011487 1339.2076363798635 1468.6543453241677 1328.889113009274 1151.203601868085 1263.3878892206135 879.228057735474 1229.7222119902824 1086.0846508644038 1.2699953185797188 1.2872498124681067 1.2830108223075516 1.2330600891136816 1.3522466634210146 1.2235594269301429 1.0599575281280824 1.1632499255146418 0.8095391616442652 1.1322526388818395 1.0 10.084920837733323 -8.153657823485421 1.3190559901851437 0.914479729801193 1.2810399808640747 0.5476789819099455 0.10112750542460008 0.14465693039335664 0.4944471308429764 0.016599033347118427 0.022617781761065214 7.020081861939034e-09 8.153657823485421 0.3665602510628817 AGLES(ph)GAEPGDGDSDTTK ddPTM_A549_MK2206_60min_R1 2 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLES(0.741)GAEPGDGDS(0.256)DT(0.003)T(0.001)K;AGLES(1)GAEPGDGDSDTTK 258.34 5.809899999999999e-87 169028000.0 10850.300000000001 9814.9 9165.9 8769.3 11876.5 11206.3 9209.8 11990.8 15282.5 14744.3 14808.6 True False 12681.565375634085 10314.436487172588 10465.762446605357 10917.778893668828 10129.48258270441 12392.143227860104 10883.101446417842 13690.532620284908 11821.038151137685 11413.552389638922 11131.215923431802 1.139279433879161 0.9266226221935153 0.9402173597741796 0.9808253625451935 0.9100068359451468 1.1132784875526476 0.9777100292797604 1.2299224733809726 1.0619718665463824 1.0253643867973836 1.0 13.442323574286005 -7.2608222972502405 24.999954196185662 1.0476220633217683 0.9743622345886916 0.18989215621208955 0.08540124577545417 84.61929986145199 3428151.4100458515 0.012450507853100855 0.02076310915044312 5.485013524370129e-08 7.2608222972502405 -0.07325982873307668 AGLES(ph)GAEPGDGDSDTTK ddPTM_A549_PD325901_60min_R1 1 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLES(0.988)GAEPGDGDS(0.011)DT(0.001)TK 278.79 7.720799999999998e-116 156330000.0 13161.0 11881.0 14280.0 13106.0 16562.0 13549.0 13796.0 13615.0 13786.0 14528.0 15332.0 True False 14497.095031383873 12882.25356637312 15249.12667261584 13915.527854114405 15398.742255798223 13438.661436156633 14321.014329460873 13343.43814423912 13206.622362106396 13610.699600636 13446.261197555741 1.0781506337255409 0.958054687254986 1.1340793138383942 1.0348994155077076 1.1452062420591238 0.9994348048660181 1.0650554915640151 0.9923530376358216 0.9821780320991454 1.0122293030504383 1.0 13.714917459276792 -8.26583755714637 22.76948796889584 0.9914065871616881 1.0583198574681165 0.2575886109046167 0.050802588738819716 98.48090531501288 509837.9182831017 0.007525474599139875 0.009265736474119912 5.4220365751699e-09 8.26583755714637 0.06691327030642846 AGLESGAEPGDGDS(ph)DTTK ddPTM_A549_PD325901_60min_R1 1 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.987)DT(0.013)TK 305.64 4.118099999999999e-152 150560000.0 17105.0 16180.0 17558.0 16712.0 20771.0 18739.0 14654.0 16032.0 17617.0 19200.0 21565.0 True False 18841.487007964522 17543.54538371493 18749.591464831163 17744.2622842942 19312.116616059942 18586.395796895657 15211.665988976492 15712.2291831393 16876.61875476775 17987.708723307507 18912.641711798176 0.9962377173470555 0.9276094609655101 0.9913787693199254 0.9382223041440524 1.0211221102979264 0.9827498495517419 0.804312069185294 0.8307791911130861 0.89234592459073 0.9510944582684251 1.0 14.207063272098138 AGLESGAEPGDGDS(ph)DTTKK ddPTM_A549_MK2206_60min_R1 2 AGLESGAEPGDGDSDTTKK 19 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.791)DT(0.172)T(0.037)KK;AGLESGAEPGDGDS(0.986)DT(0.012)T(0.002)KK 251.02 1.9840999999999997e-97 250490000.0 24017.0 21084.0 18757.9 17669.0 23530.0 18581.199999999997 17499.300000000003 21893.0 27500.0 28228.0 29299.0 True False 28070.482440725486 22157.08554295476 21418.052280428405 21997.90579319155 20068.76817000252 20547.45025079768 20678.696295391866 24996.39979450056 21271.29390847614 21851.275194802576 22023.249688736832 1.2745840344843087 1.006077025693732 0.9725200677982624 0.9988492208959404 0.9112537183949798 0.9329890248352445 0.9389484561838937 1.1350005175341704 0.9658562750325961 0.9921912298881936 1.0 14.42673974417885 -5.260857666339685 4.166563109986554 0.9829531637006336 1.2984742514719396 0.694052306528739 0.055372754590810175 0.0907620337714082 3.4753827243178685 0.007344965570590268 0.08529148448539957 5.484566841203436e-06 5.260857666339685 0.31552108777130605 AGLESGAEPGDGDS(ph)DTTKK ddPTM_A549_PD325901_60min_R1 4 AGLESGAEPGDGDSDTTKK 19 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.98)DT(0.018)T(0.002)KK;AGLESGAEPGDGDS(0.987)DT(0.011)T(0.002)KK;AGLESGAEPGDGDS(0.984)DT(0.014)T(0.001)KK;AGLESGAEPGDGDS(0.998)DT(0.001)T(0.001)KK 270.0 1.8249999999999995e-111 520490000.0 43978.399999999994 45488.4 50080.7 42204.9 57630.1 38590.5 41357.7 43056.2 45187.5 53193.700000000004 55420.6 True False 48443.05479281306 49321.8671095537 53479.4774617137 44811.80081871762 53582.36058905185 38276.23176263949 42931.58990530182 42197.41031406451 43288.42651876413 49835.04070390638 48604.217540129 0.9966841818370417 1.0147651707145 1.1003052855970687 0.9219735053181288 1.102422038680342 0.7875084447360471 0.8832893949965618 0.8681841298900687 0.8906310750301452 1.025323381921768 1.0 15.568793885977836 -7.237377642683308 24.99941393210621 0.9249953783523696 1.0247496852484712 0.36333511049756917 0.07623757142082202 808.2574125684166 839755.2995330853 0.011371201076698458 0.019689179249503794 5.7892507064359263e-08 7.237377642683308 0.09975430689610165 AGLESGAEPGDGDS(ph)DTTKKK ddPTM_A549_MK2206_60min_R1 4 AGLESGAEPGDGDSDTTKKK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.931)DT(0.034)T(0.034)KKK;AGLESGAEPGDGDS(0.984)DT(0.008)T(0.008)KKK;AGLESGAEPGDGDS(0.985)DT(0.013)T(0.002)KKK;AGLESGAEPGDGDS(0.333)DT(0.333)T(0.333)KKK 160.33 2.1416e-27 227205300.0 5600.67 5127.119999999999 4745.27 4440.43 6991.8 5517.89 5223.6 4635.459999999999 7256.9400000000005 7748.129999999999 8535.2 True False 6545.926172765042 5388.068508299856 5418.2206400902305 5528.33554933848 5963.315481981453 6101.789457321059 6172.660504626408 5292.550650500871 5613.254676951887 5997.822051690013 6415.674280463726 1.0203021360822422 0.8398288742162274 0.8445286345956142 0.8616920541263654 0.9294916202557626 0.9510753181316463 0.962121865105073 0.8249406717259848 0.8749282509626034 0.9348700993056788 1.0 12.647385183641935 -10.786908837781413 1.026024265477168 1.0002375000592854 0.8972845036576049 0.1206654258009644 0.06035888920435838 0.5364999192695397 0.999536946791647 0.03991718014678912 0.009957456167084081 1.6333947757928496e-11 10.786908837781413 -0.10295299640168043 AGLESGAEPGDGDS(ph)DTTKKK ddPTM_A549_PD325901_60min_R1 4 AGLESGAEPGDGDSDTTKKK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.997)DT(0.002)TKKK;AGLESGAEPGDGDS(0.665)DT(0.168)T(0.168)KKK;AGLESGAEPGDGDS(0.936)DT(0.032)T(0.032)KKK;AGLESGAEPGDGDS(0.912)DT(0.044)T(0.044)KKK 173.65 5.598899999999999e-35 337519000.0 5679.8 6628.700000000001 6744.5 5753.92 7405.5 5674.9 6890.2 6741.1 6658.999999999999 8159.0 7601.599999999999 True False 6256.40911475223 7187.323812424676 7202.222327973214 6109.326570299551 6885.363227588075 5628.685495907098 7152.410331462112 6606.643472209355 6379.145387296272 7643.839347576344 6666.651390512633 0.938463517629822 1.0781010422493393 1.0803358247024522 0.9164010854075533 1.032806850735692 0.8443047590454973 1.0728640081046934 0.9909987916289316 0.9568740006976346 1.1465785294329858 1.0 12.702746572999756 -6.250814548805389 24.933555970659075 0.9774434441874766 1.0368802138080742 0.005978070827555415 0.0834582048624697 1002.3269108975371 2352181.150151698 0.008326077522272234 0.021791297219997743 5.612876043027319e-07 6.250814548805389 0.05943676962059752 AGLGS(ph)PERPPK ddPTM_A549_MK2206_60min_R1 5 AGLGSPERPPK 11 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK 118.37 4.395e-06 2826951700.0 30907.600000000002 34387.4 31357.3 30497.2 43262.700000000004 33738.7 30758.3 31925.9 45967.6 50631.9 46690.100000000006 True False 36124.047261729895 36137.57177953913 35804.23665618633 37969.01536907133 36898.81413975214 37308.90684006348 36346.68496811592 36451.49409396819 35556.01199517338 39194.11862461828 35095.659588794595 1.0293024175919363 1.0296877791428432 1.020189877486103 1.0818721122196586 1.0513782778863419 1.0630632755503342 1.035646156646697 1.0386325409198602 1.013117075210228 1.116779655485724 1.0 15.09900499763139 -8.794754586071601 1.4962721600656237 1.004463868349817 1.0456832166456942 0.0 0.03762843075027277 0.21173269111820045 0.9331708932145876 0.003395978626997078 0.0035914728549225395 1.6041516189659325e-09 8.794754586071601 0.041219348295877145 AGLGS(ph)PERPPK ddPTM_A549_PD325901_60min_R1 6 AGLGSPERPPK 11 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK 119.88 3.6405e-06 4111127700.0 40500.9 39614.100000000006 39460.8 40284.1 47532.4 44258.200000000004 42202.5 42125.299999999996 42416.7 45223.8 47781.799999999996 True False 44612.52155281327 42952.51923269604 42138.84718506716 42772.35736517089 44193.88820187801 43897.77589295947 43808.53923159413 41285.07784484143 40634.073607047576 42368.36155005803 41904.941513786114 1.0646124285398753 1.0249989065982896 1.0055818159584855 1.0206996077324055 1.0546223573021543 1.0475560711263072 1.0454265690164908 0.9852078622102178 0.9696726003943845 1.0110588398296525 1.0 15.35483275896521 -8.26782110217592 24.4735741274812 0.9852432583105661 1.0363058474903384 0.5810709263830448 0.018558341613435277 192.4304008747536 737959.6729945554 0.003171062864163388 0.003879842358890001 5.397329075365739e-09 8.26782110217592 0.051062589179772244 AGLGS(ph)PERPPKT(ph)SPGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 AGLGS(0.85)PERPPKT(0.817)S(0.418)PGS(0.915)PR 42.472 0.030705 29157000.0 7895.9 8346.6 7284.2 5614.4 8967.3 7638.8 6778.8 6981.9 9354.6 10938.0 12353.0 True False 9228.534883779164 8771.40628878895 8317.209091694516 6989.928252039991 7648.222048910484 8447.13274577494 8010.4202137915345 7971.605706171991 7235.798036226581 8467.09820322908 9285.40917454405 0.993874875119041 0.944644024178898 0.8957288726162059 0.7527862392109634 0.823681746829002 0.9097211105066597 0.8626889847517009 0.8585088235019465 0.7792653937172227 0.9118713073454674 1.0 13.180749770598643 -11.041944947955125 1.3582116851093746 0.9995537451187475 0.8576425362065916 0.13275338838342576 0.07086920739549081 0.3995828988475748 1.320809759448288 0.05124533299492627 0.011621391677379722 9.079356146344678e-12 11.041944947955125 -0.14191120891215592 AGLGS(ph)PERPPKT(ph)SPGS(ph)PR ddPTM_A549_PD325901_60min_R1 3 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 AGLGS(0.999)PERPPKT(0.569)S(0.569)PGS(0.862)PR;AGLGS(0.996)PERPPKT(0.86)S(0.144)PGS(0.999)PR;AGLGS(0.994)PERPPKT(0.666)S(0.597)PGS(0.743)PR 89.803 2.5426e-06 182952000.0 22636.2 22471.2 23881.7 22173.9 23964.8 25179.399999999998 22947.8 26033.5 24674.2 24888.399999999998 28192.0 True False 24934.210360110323 24364.926886683246 25502.455774328406 23543.531442419302 22281.595122071813 24974.347314603463 23821.09108651798 25514.241419614333 23637.229180841827 23316.94217651907 24724.5627238124 1.0084793263541123 0.98545430949997 1.0314623582712268 0.9522324704147087 0.901192687246689 1.010102689927474 0.9634585392920102 1.0319390358738838 0.9560221325199271 0.943067929531565 1.0 14.593657385396689 -4.157556061370594 0.001017824707748411 1.3259142144740708 0.6331399159548539 0.0 0.03911734207287147 4744908.183693955 525.9710362605286 177301.51238992432 180713.89002192655 6.957351391845555e-05 4.157556061370594 -0.6927742985192169 AGLGS(ph)PERPPKT(ph)SPGSPR ddPTM_A549_MK2206_60min_R1 1 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 AGLGS(0.996)PERPPKT(0.502)S(0.282)PGS(0.22)PR 74.062 0.015715 23306000.0 6410.6 7969.7 7250.0 7353.1 9131.5 6345.0 5854.0 6333.9 9670.4 11450.0 12195.0 True False 7492.552555877699 8375.323688659011 8278.159017432972 9154.609830093204 7788.2684464249005 7016.42368852987 6917.596024596639 7231.7497217552245 7480.069840455549 8863.437047629639 9166.644935122218 0.8173713074856653 0.9136738411857493 0.9030740337410702 0.9986870763388139 0.8496312992972995 0.7654298533639364 0.7546486281029284 0.7889200217678993 0.8160095534840106 0.9669226974930784 1.0 13.162178077244292 -10.748539405275643 1.0410154304322055 0.99848358228431 0.8461186299682132 0.37269939867678203 0.06870269053865817 0.45841309323649765 0.8957607635782421 0.049872227554380054 0.01328266571005118 1.784270087232903e-11 10.748539405275643 -0.1523649523160968 AGLGS(ph)PERPPKT(ph)SPGSPR ddPTM_A549_PD325901_60min_R1 2 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 AGLGS(1)PERPPKT(0.473)S(0.315)PGS(0.212)PR;AGLGS(1)PERPPKT(0.58)S(0.337)PGS(0.082)PR 86.182 1.6606e-05 54704000.0 5974.3 6493.200000000001 6593.3 6591.6 6264.1 7134.6 5815.6 6733.8 6944.3 6862.5 7645.0 True False 6580.806537952794 7040.404751887387 7040.76098673375 6998.74816139024 5824.1312259718425 7076.498183069087 6036.915840418427 6599.489076436097 6652.455220453754 6429.200578838427 6704.713465647902 0.9815194298265013 1.0500679541280062 1.0501210861295731 1.0438549234428656 0.8686622114147327 1.0554512462502763 0.9003987823415593 0.9843059081121169 0.9922057451877851 0.9589075822224042 1.0 12.710959962724441 AGLGS(ph)PERPPKTS(ph)PGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 AGLGS(0.999)PERPPKT(0.186)S(0.816)PGS(0.999)PR 103.51 1.8732e-09 96930000.0 20369.0 20616.0 22500.0 21651.0 23401.0 22353.0 22543.0 24725.0 23722.0 25440.0 25960.0 True False 22436.845885134724 22353.38267185828 24026.98530349132 22988.333097011364 21757.39448906738 22170.964579113526 23400.886201002915 24231.840478612725 22725.046835477126 23833.71405838245 22767.084573998633 0.9854949065704679 0.9818289469257374 1.0553386941308933 1.0097179119396522 0.9556513227835778 0.9738165862674437 1.0278385062849953 1.0643365600831882 0.9981535739288501 1.0468496298204986 1.0 14.474661939362775 -7.762156304384073 24.999798193641492 1.0069915002437169 0.9949128203641195 0.08075641780219789 0.03241154851387729 68.31579753563179 2382166.144981589 0.005020626902223018 0.007182726136626786 1.7291939031567655e-08 7.762156304384073 -0.01207867987959732 AGLGS(ph)PERPPKTSPGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 AGLGS(0.907)PERPPKT(0.348)S(0.314)PGS(0.431)PR;AGLGS(0.981)PERPPKT(0.159)S(0.392)PGS(0.468)PR 78.352 0.00011563 49817000.0 7206.900000000001 8831.5 8624.8 7756.400000000001 11393.7 8492.4 7027.4 7736.9 11945.9 11978.2 13701.5 True False 8423.248528211874 9280.985627613592 9847.92633014564 9656.718348198026 9717.701823143121 9391.06013120112 8304.187615861012 8833.629268262528 9240.172723682364 9272.316300778806 10299.039407837396 0.8178673946816752 0.9011506083325518 0.9561985288309056 0.9376329156338042 0.9435541935831524 0.9118384501038691 0.8063070046650822 0.8577139011178349 0.8971878209001461 0.90030884761182 1.0 13.330222162960267 -10.45467392152433 0.8932815095283926 0.9971685965188684 0.8951305125303204 0.04410747949976168 0.05423814653299655 0.464958445801409 0.6932663068121221 0.028624881333922495 0.009336810947866949 3.5101532557062986e-11 10.45467392152433 -0.10203808398854797 AGLGS(ph)PERPPKTSPGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 AGLGS(0.412)PERPPKT(0.462)S(0.477)PGS(0.649)PR 48.181999999999995 0.006640699999999999 25940000.0 1623.9 1538.3 1851.3 1671.9 2201.4 2112.8 1829.1 1831.5 1848.6 2095.8 1886.6 True False 1788.7571325480042 1667.93793966432 1976.9403507712675 1775.169465839606 2046.7812584177166 2095.594057296607 1898.7074014219254 1794.9692957160453 1770.9097706796663 1963.470830328534 1654.560160142751 1.0811073393630335 1.0080853992763943 1.1948434383919302 1.0728950863209767 1.2370546008077008 1.2665565796748088 1.147560207939559 1.0848619101049672 1.070320568172557 1.1867025917988567 1.0 10.692232033950306 -9.008582839951242 1.1130398967747501 1.020836091622188 1.1434975878172216 0.0 0.087247765804693 0.37768020502419253 0.9573732524357976 0.017457273811641954 0.016516927301187558 9.804312831031675e-10 9.008582839951242 0.12266149619503364 AGLGSPERPPKT(ph)SPGSPR ddPTM_A549_MK2206_60min_R1 1 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGS(0.002)PERPPKT(0.373)S(0.251)PGS(0.373)PR 99.40700000000001 1.7163e-07 16115000.0 1864.5 2121.3 2213.7 1918.7 2617.8 1779.2 1942.5 2195.3 3081.7 2622.0 3034.9 True False 2179.182017351569 2229.265109195123 2527.635947157429 2388.7815861337153 2232.7250877786905 1967.473763062624 2295.4271058727304 2506.4904978242866 2383.69987046367 2029.6883789419144 2281.2505710211085 0.955257631508733 0.9772118580543669 1.1080045214086396 1.0471368715381735 0.9787285606154621 0.8624540364200171 1.006214369886284 1.0987352856649846 1.0449092707061567 0.8897261899789497 1.0 11.155609204663953 -8.006044206208088 24.949178108456497 1.0287981530099242 0.99025545358098 0.0 0.07402856221663234 614.8896170922618 2538136.21892782 0.010336349498234849 0.014030277364472349 9.861790987759941e-09 8.006044206208088 -0.03854269942894417 AGLGSPERPPKT(ph)SPGSPR ddPTM_A549_PD325901_60min_R1 2 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGSPERPPKT(0.498)S(0.498)PGS(0.005)PR;AGLGS(0.012)PERPPKT(0.705)S(0.249)PGS(0.035)PR 73.315 0.0010923 14268400.0 4677.700000000001 4962.200000000001 4250.1 5506.8 6340.1 6168.7 5380.9 5534.7 5151.4 5545.1 5785.6 True False 5152.576660459261 5380.382008842415 4538.537343927493 5846.94252914979 5894.793248157606 6118.464152425968 5585.673094041463 5424.306066611844 4934.904572476055 5194.981439667314 5074.007877940161 1.0154845606095109 1.0603810908994153 0.894467934048607 1.1523321740531882 1.1617627307568648 1.2058444329632798 1.1008404457403043 1.0690377699637883 0.9725851222918133 1.0238418159051543 1.0 12.3089100440041 -8.686766153625156 5.091849207698055 0.9870738510287432 1.0861909347540175 0.1784962090324057 0.07912467408504255 0.22946518858382084 10.835982034586074 0.014170052768128166 0.01598209808772372 2.056997890780194e-09 8.686766153625156 0.09911708372527428 AGLGSPERPPKTS(ph)PGSPR ddPTM_A549_PD325901_60min_R1 1 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGSPERPPKT(0.403)S(0.579)PGS(0.017)PR 89.663 1.2911000000000002e-06 20660000.0 3143.8 3126.6 3764.4 3795.6 3767.9 3878.4 3672.6 4080.2 3671.2 3661.2 4193.5 True False 3462.95626165676 3390.0895548036533 4019.874821176123 4030.045591566961 3503.2557025493356 3846.8155962794203 3812.3628027238315 3998.8172101450205 3516.912230941896 3430.0312071757 3677.7260847867215 0.9416025505492707 0.9217895723194544 1.0930326860950124 1.095798191234971 0.9525602564695886 1.0459766463283262 1.036608685593538 1.0873069711979162 0.9562735641161401 0.9326499929846227 1.0 11.844598317202662 -8.834003340022775 24.999999113162616 0.9793514163537888 1.0223332999258972 0.14437880348296583 0.0603133886188548 77.52413383124318 26707.226835598743 0.01052281332399718 0.011202388237146465 1.4655365699300332e-09 8.834003340022775 0.042981883572108415 AGLLLGK ddPTM_A549_MK2206_60min_R1 1 AGLLLGK 7 0 Q3KRA9;Q3KRA9-2 Q3KRA9 ALKBH6 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 0 81.672 0.042405 2406000.0 2359.5 2823.2 2537.5 2433.0 3817.7 2767.2 3241.4 2602.9 4116.8 3490.5 3947.9 False True 2757.7259157634926 2966.8888211378244 2897.3556561015407 3029.0851092215203 3256.1213872766084 3060.023267281302 3830.320422638802 2971.8690460469356 3184.3513731787093 2701.993625742468 2967.5274735029934 0.9293008878223317 0.9997847863681562 0.9763534396806716 1.020743745851782 1.0972506291350175 1.031169313377619 1.2907447216039862 1.0014630269079927 1.07306550709698 0.9105201720518266 1.0 11.535045671126758 -6.391512942986402 3.0603107422336016 1.0558819768462309 0.9704411474657814 0.1592611666928756 0.08931585946027762 0.35783895894051926 6.342299592429305 0.011423986379277482 0.02915325238259747 4.059635644121629e-07 6.391512942986402 -0.0854408293804495 AGLLNTS(ph)GTK ddPTM_A549_MK2206_60min_R1 2 AGLLNTSGTK 10 0 A0A087WT26;H3BQD9;Q08AM6 A0A087WT26 VAC14 Protein VAC14 homolog 1 AGLLNT(0.036)S(0.964)GT(0.001)K;AGLLNT(0.016)S(0.952)GT(0.032)K 124.67 1.9774e-05 12672200.0 5464.4 6104.5 5432.5 5430.6 6560.1 4898.3 5386.2 4952.0 7900.5 7424.7 8481.1 True False 6386.65712824667 6415.192975572347 6202.910187890294 6761.097243788901 5595.117980111926 5416.634854771613 6364.802819897915 5653.961164863963 6111.049364506029 5747.455113321903 6375.008803547764 1.0018271856648142 1.0063033908286088 0.9730041760002441 1.0605628089527146 0.8776643534983325 0.8496670391666276 0.9983990635990699 0.8868946442422904 0.958594654976031 0.9015603413948824 1.0 12.638211618920003 -6.7395775950892975 24.999985994073224 0.9582218971383153 1.0074571223973807 0.24128897257784587 0.05557288960816441 384.13431061458334 439273.28641190275 0.008249764873669296 0.017162247199776735 1.8214716029681617e-07 6.7395775950892975 0.04923522525906543 AGLLNTS(ph)GTK ddPTM_A549_PD325901_60min_R1 2 AGLLNTSGTK 10 0 A0A087WT26;H3BQD9;Q08AM6 A0A087WT26 VAC14 Protein VAC14 homolog 1 AGLLNT(0.166)S(0.833)GT(0.001)K;AGLLNT(0.094)S(0.906)GTK 132.62 9.724700000000002e-07 23475000.0 9280.0 9021.6 9410.400000000001 10724.6 11580.4 11416.4 10422.8 11263.3 10375.5 10335.900000000001 11742.2 True False 10222.098768425072 9781.881893307953 10049.046333332217 11387.034184666207 10767.032654211194 11323.42862349536 10819.445357575009 11038.644645612087 9939.453816773164 9683.28951006427 10297.983839938628 0.9926310749081533 0.9498832048435463 0.9758265782433103 1.105753743806037 1.045547635494771 1.0995772375928339 1.0506372437305638 1.0719228945379538 0.9651844449614517 0.9403092547601026 1.0 13.330074290857013 -8.77279889768616 24.99748467113557 0.9835593199385797 1.0367521511669058 0.2662991625754192 0.04852240698664151 271.1008973209967 596576.2833414378 0.008869685379341744 0.009482954559844714 1.6873341733637365e-09 8.77279889768616 0.053192831228326076 AGLQFPVGR ddPTM_A549_MK2206_60min_R1 2 AGLQFPVGR 9 0 P16104;Q71UI9-2;Q71UI9;P0C0S5;C9J0D1;A0A494C189;Q71UI9-5;A0A0U1RR32;A0A0U1RRH7;P20671;A0A3B3IS11;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;Q8IUE6;Q93077 P16104;A0A0U1RR32;Q99878;Q93077 H2AFX;H2AFV;H2AFZ;HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST2H2AB;HIST1H2AC Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A;Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A type 2-B;Histone H2A type 1-C 0 ; 101.33 0.0020448 123843000.0 4701.200000000001 5162.9 5087.200000000001 4916.7 7203.3 5019.4 5393.6 4553.3 6923.4 6868.700000000001 7424.599999999999 False True 5494.6476266952 5425.669557471123 5808.641455653103 6121.2917207190485 6143.70411215381 5550.549576391938 6373.547304110765 5198.744218896425 5355.260954397952 5317.055899480672 5580.866911464405 0.9845509154514883 0.9721911745154734 1.0408134699863196 1.0968352798638656 1.1008512135512862 0.9945676298049343 1.1420353513569745 0.9315298682749429 0.9595751053294237 0.9527293848484716 1.0 12.446273527097704 -8.293667235087579 24.999858870268902 0.9766735401102359 1.0461844185902094 0.3741034163549768 0.052358870525531634 642.828656270944 498654.6920962523 0.008683202006779961 0.010497998351929359 5.085489534545544e-09 8.293667235087579 0.0695108784799735 AGLQFPVGR ddPTM_A549_PD325901_60min_R1 3 AGLQFPVGR 9 0 P16104;Q71UI9-2;Q71UI9;P0C0S5;C9J0D1;A0A494C189;Q71UI9-5;A0A0U1RR32;A0A0U1RRH7;P20671;A0A3B3IS11;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;Q8IUE6;Q93077 P16104;A0A0U1RR32;Q99878;Q93077 H2AFX;H2AFV;H2AFZ;HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST2H2AB;HIST1H2AC Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A;Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A type 2-B;Histone H2A type 1-C 0 ;; 166.61 3.3275e-06 195504000.0 16865.3 17523.5 19389.7 18319.0 21631.3 20460.0 21512.1 21382.0 20741.5 22457.100000000002 22639.0 False True 18577.45284042234 19000.266843728605 20705.60164173805 19450.523024532406 20111.99211193384 20293.380543491377 22330.754737372816 20955.5192361455 19869.806885509195 21039.154873447333 19854.546520445117 0.9356775195692484 0.9569730955155877 1.0428644955661195 0.9796508323422712 1.0129665812927844 1.0221024450291207 1.124717440127773 1.0554519195171073 1.0007686080892537 1.0596643369206329 1.0 14.27718178950897 -5.63105085043293 5.515375974264794 1.015293304306768 0.940899833381534 0.34659387988803003 0.040618916436887614 0.17990972998780505 7.839742805648298 0.005728870164422259 0.02327971767558478 2.3385634062053178e-06 5.63105085043293 -0.07439347092523396 AGLQMKS(ph)PEK ddPTM_A549_MK2206_60min_R1 3 AGLQMKSPEK 10 1 Q9BRQ0 Q9BRQ0 PYGO2 Pygopus homolog 2 1 AGLQMKS(1)PEK;AGLQMKS(1)PEK;AGLQMKS(1)PEK 69.03 0.0010607000000000001 48893000.0 13605.199999999999 13815.5 13883.4 12322.2 17540.8 13264.7 13474.3 13093.900000000001 19725.300000000003 20801.3 19825.1 True False 15901.425144795703 14518.649939228408 15852.27488312123 15341.139553164576 14960.571556157254 14668.361749604763 15922.40589583575 14950.000423386977 15257.551044831434 16102.271882869729 14901.980525075143 1.067067905372633 0.9742765342363912 1.0637696684978921 1.0294698431091405 1.003931761351018 0.9843229713609357 1.0684758223273454 1.0032223836443104 1.0238606216910553 1.0805457607312592 1.0 13.863216462171364 -14.99999999999847 0.19426113126855632 0.8939548965755966 1.0277521761802033 0.0 0.03895945576251635 95.51987561158701 1.1071328547193249 3.855928286177197 0.02623505112936893 1.0000000000035218e-15 14.99999999999847 0.13379727960460674 AGLQMKS(ph)PEK ddPTM_A549_PD325901_60min_R1 4 AGLQMKSPEK 10 1 Q9BRQ0 Q9BRQ0 PYGO2 Pygopus homolog 2 1 AGLQMKS(1)PEK;AGLQMKS(1)PEK;AGLQMKS(1)PEK;AGLQMKS(1)PEK 71.176 0.0007679 129420000.0 25328.2 25160.600000000002 27411.5 24795.0 32345.3 28575.4 27294.5 28754.1 29322.600000000002 28562.199999999997 29497.3 True False 27899.50021836465 27280.972063133366 29271.809228740138 26326.530836469283 30073.477713227287 28342.69141654367 28333.207133623484 28180.576918344916 28090.273094088276 26758.777817544444 25869.319098790842 1.078478336125542 1.0545686169377573 1.1315260798691966 1.017673899182751 1.1625152404816466 1.0956102597175985 1.0952436368898402 1.0893435892428303 1.0858528199685489 1.0343827649795072 1.0 14.658954461182248 -10.490900439958743 0.6730558445567315 0.9952117535958178 1.0915956901432198 0.3603009491616086 0.03654530867568371 0.5315020287111075 0.40458551027836637 0.028240620890839625 0.006784106067583046 3.2292343241956e-11 10.490900439958743 0.09638393654740196 AGLQS(ph)LEASGR ddPTM_A549_MK2206_60min_R1 2 AGLQSLEASGR 11 0 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AGLQS(0.999)LEAS(0.001)GR;AGLQS(0.996)LEAS(0.004)GR 102.97 0.00022074 5888200.0 1825.74 1966.33 1576.24 1620.95 1925.0 1731.81 1643.27 1767.9 2413.8599999999997 2599.2 2547.5 True False 2133.8802769425874 2066.4077981255105 1799.7745337432464 2018.0828227672098 1641.8350500320796 1915.0689847175613 1941.8308881685878 2018.5052389666819 1867.1245641423347 2012.038914777201 1914.8854425767804 1.1143644572654514 1.0791286790215673 0.9398862687688334 1.0538921952696874 0.8574064085122145 1.0000958501938026 1.0140715705455194 1.0541127913377757 0.9750581014547921 1.0507359187344834 1.0 10.903042370613921 -5.620763733033879 5.671492228586986 0.9882688106196 1.1058784300601283 0.3443762027009796 0.055005739363308125 0.12775956158003296 5.9493798553669315 0.006531615072459697 0.026467588893895756 2.39461813374778e-06 5.620763733033879 0.11760961944052828 AGLQS(ph)LEASGR ddPTM_A549_PD325901_60min_R1 1 AGLQSLEASGR 11 0 O60784-3;O60784-4;O60784;O60784-2 O60784-3 TOM1 Target of Myb protein 1 1 AGLQS(1)LEASGR 99.844 0.00027219 4858100.0 1717.4 1672.5 1477.3 1756.1 1774.8 1682.4 1721.1 1975.8 1784.1 1615.9 1736.8 True False 1891.749183716943 1813.4474446392596 1577.5584617265674 1864.5703086075314 1650.144170727611 1668.6990921979432 1786.5974023220565 1936.391119014886 1709.120481374874 1513.8717982287812 1523.1846104823135 1.241969732820452 1.190563134737184 1.0356974793928864 1.2241262784404832 1.08335139376513 1.0955330566723314 1.172935565411427 1.2712780221707543 1.1220704762987885 0.993885959594495 1.0 10.572875092204058 -10.048138193753282 0.8617405952685971 1.0101392420237931 1.157569643547831 0.4457183956761581 0.06904749040302588 0.3911648152769735 0.5840492816172073 0.029657428125830665 0.013708609162138315 8.950799032303102e-11 10.048138193753282 0.14743040152403797 AGLQT(ph)ADK ddPTM_A549_MK2206_60min_R1 1 AGLQTADK 8 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 AGLQT(1)ADK 60.43600000000001 0.01198 11668000.0 3424.7 4896.0 4146.7 3851.3 4996.0 4494.3 3911.5 3775.3 5575.7 6527.1 6393.5 True False 4002.705634123853 5145.185487493194 4734.76441346059 4794.868672891425 4261.095018161181 4969.883842925108 4622.168918723907 4310.460336371351 4312.812852563285 5052.623576732173 4805.8174983767 0.8328875650138357 1.0706160792063213 0.9852151928490605 0.9977217558742143 0.8866535234849191 1.034139112565932 0.9617861935633583 0.8969255153420475 0.8974150296011153 1.0513556909805333 1.0 12.230566147614647 -8.006347162827227 24.86211707393331 0.945308542313956 0.9732429769081026 0.0 0.07385590343786635 880.1397577125592 3447564.240726101 0.010729476781668912 0.014549578713901485 9.854913965048694e-09 8.006347162827227 0.027934434594146573 AGLQT(ph)ADK ddPTM_A549_PD325901_60min_R1 2 AGLQTADK 8 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 AGLQT(1)ADK;AGLQT(1)ADK 61.998999999999995 0.0112 39078000.0 9223.2 9768.3 10262.4 8829.900000000001 11383.0 9288.7 10678.8 11193.6 11842.5 11888.6 10142.3 True False 10159.532474239026 10591.508922851828 10958.868176824419 9375.302868842115 10583.497349218162 9213.055906858675 11085.187577663577 10970.33486679067 11344.800908403084 11137.951767078826 8894.861397336916 1.1421799644096475 1.1907446838938807 1.2320448500867545 1.0540133735697153 1.1898439870447917 1.035772846288198 1.2462462406645747 1.2333339865279005 1.2754331294920087 1.252178226229976 1.0 13.118756409779861 -10.994438220513347 1.2935347778093464 1.0007872256531458 1.1862372207509493 0.0 0.10313050571080506 0.33158553518080647 0.9942253046792173 0.05324903744162912 0.012393763199898798 1.0128888245595773e-11 10.994438220513347 0.18544999509780347 AGLREGS(ph)EEK ddPTM_A549_MK2206_60min_R1 6 AGLREGSEEK 10 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 AGLREGS(1)EEK;AGLREGS(1)EEK;AGLREGS(1)EEK;AGLREGS(1)EEK;AGLREGS(1)EEK;AGLREGS(1)EEK 123.95 7.0048e-06 508235000.0 34415.3 37476.200000000004 36086.1 32019.499999999996 52091.0 37786.899999999994 38384.5 35637.4 56245.0 51025.600000000006 55661.6 True False 40223.76126669859 39383.57850620763 41203.65160261899 39864.27893740995 44428.48290453042 41785.484677085784 45358.46679298422 40689.11058496023 43505.59730480872 39498.88152118171 41839.288537990884 0.9613873149438149 0.9413061235600739 0.9848076542985496 0.9527953349687678 1.0618842828598412 0.9987140349947335 1.0841118092100885 0.9725096197086079 1.039826412566858 0.9440619786188755 1.0 15.35257069883413 -6.740794920200042 24.999087010899284 1.0216128886551288 0.9605001959678992 0.30537654242412404 0.038489436139000854 156.91906727183886 190017.59300402706 0.004151319448975862 0.008634303745835972 1.816373176572919e-07 6.740794920200042 -0.06111269268722963 AGLREGS(ph)EEK ddPTM_A549_PD325901_60min_R1 4 AGLREGSEEK 10 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 AGLREGS(1)EEK;AGLREGS(1)EEK;AGLREGS(1)EEK;AGLREGS(1)EEK 155.86 4.3332e-09 624053000.0 35129.3 36054.8 38883.0 37758.8 43418.3 38263.4 37225.6 38985.5 39936.4 39978.1 44919.5 True False 38695.6006751762 39093.26453033159 41521.8342024735 40091.07531954334 40368.748393003494 37951.795556589845 38642.24057862991 38207.90361896688 38258.01199057202 37453.87594329478 39394.68626817151 0.982254317543325 0.9923486701788142 1.0539958084656864 1.0176772330824342 1.0247257236217406 0.9633734686510899 0.9808998176957301 0.9698745500566791 0.9711465076822341 0.9507342104042904 1.0 15.265713425181534 -7.250317722916004 24.9629445299201 0.9827886460167933 1.0153903878930686 0.4389361356718342 0.021780359584036464 623.7332734756086 1399991.0992506002 0.0031531623443469972 0.005428319521178419 5.6193007569625857e-08 7.250317722916004 0.03260174187627529 AGLS(ph)PANCQSDR ddPTM_A549_MK2206_60min_R1 2 AGLSPANCQSDR 12 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 AGLS(1)PANCQSDR;AGLS(1)PANCQSDR 186.67 2.4969000000000003e-19 79194000.0 6410.799999999999 6521.7 5224.7 5766.700000000001 7466.799999999999 5793.6 5059.4 5647.200000000001 7682.200000000001 7736.099999999999 8648.5 True False 7492.78631098817 6853.626673567071 5965.6410232251055 7179.5417588770015 6368.443611210146 6406.674906519568 5978.627490065634 6447.707893824672 5942.193965952561 5988.509637045207 6500.838763542802 1.1525876250012976 1.054268060300577 0.9176725096891918 1.1044023732968764 0.9796341430470268 0.985515121902221 0.9196701698854973 0.9918270746821024 0.9140657355289038 0.9211903040311081 1.0 12.666410156947133 -2.0000000000011995 0.5767562963970829 0.962343152018754 10.917897919424735 0.5122886051974418 0.053405126893544264 83.39539722339198 0.6365242304412633 0.009206458194992932 1042.6657157469672 0.009999999999972382 2.0000000000011995 9.955554767405982 AGLS(ph)PANCQSDR ddPTM_A549_PD325901_60min_R1 2 AGLSPANCQSDR 12 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 AGLS(1)PANCQSDR;AGLS(1)PANCQSDR 187.6 2.1929000000000003e-19 106339000.0 14607.5 15025.3 13397.599999999999 13254.7 13933.0 12699.5 13231.2 13940.3 11197.400000000001 13254.5 16150.9 True False 16090.442646526868 16291.534762294938 14306.841702313583 14073.412715392195 12954.394146240582 12596.079482505802 13734.720556390457 13662.249780546204 10726.812218007412 12417.608607972878 14164.441688990542 1.135974364526724 1.1501713318469657 1.010053344596965 0.9935734160514705 0.9145714621642671 0.8892746893297061 0.9696619787750554 0.9645455910320369 0.7573056851471199 0.8766747663358021 1.0 13.789986116570875 -6.034030977998872 0.8978900261120009 0.8944318984433444 1.1868152605327333 0.6507259681749376 0.06340969064757729 0.5711090645119534 0.6421167265577709 0.014388260575116446 0.12533177552826077 9.246322180521138e-07 6.034030977998872 0.292383362089389 AGLSEEDDS(ph)LVDVYYR ddPTM_A549_PD325901_60min_R1 2 AGLSEEDDSLVDVYYR 16 0 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 AGLSEEDDS(1)LVDVYYR;AGLSEEDDS(1)LVDVYYR 243.04 1.5816999999999999e-65 15710600.0 5336.8 5353.5 5675.200000000001 5400.1 5947.9 4390.799999999999 5189.4 4748.700000000001 5693.5 5004.2 5148.6 True False 5878.588007255486 5804.658233109886 6060.353199749958 5733.651912483072 5530.140023141059 4355.042780565097 5386.88545674864 4653.983453216917 5454.221994679586 4688.233957977884 4515.354839664458 1.301910528850559 1.2855375577838835 1.342165436592866 1.2698120338443095 1.2247409604583834 0.9644962434200909 1.1930148677194428 1.0307015989828079 1.2079276575935494 1.0382869396652494 1.0 12.140623651174165 -2.00000000000013 0.10853623314341124 0.9582140691218203 2.088748162766079 0.5671421721530792 0.08490376310032381 62.57086026749822 0.4594711340760053 0.469763024678108 10.639642919102597 0.009999999999997004 2.00000000000013 1.130534093644259 AGLVGPEFHEK ddPTM_A549_PD325901_60min_R1 2 AGLVGPEFHEK 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 115.18 2.3074e-05 9430500.0 3142.5 3965.0 3654.0 3413.1 4072.1000000000004 4979.7 3742.3 3666.5 4057.6 4552.2 4215.7 False True 3461.5242866137696 4299.144465168711 3901.982413286993 3623.9194352874924 3786.089743982366 4939.146974214275 3884.7152743651345 3593.368781186393 3887.07318268409 4264.773315116689 3697.1956255241143 0.9362567300244125 1.1628122773620517 1.0553897625403168 0.9801806023650063 1.024043661050705 1.3359171313836287 1.0507194284085082 0.9719174058248533 1.0513571843072433 1.1535157311325974 1.0 11.852215665895324 -7.996703333341377 24.99923329506155 1.0205432859631816 1.0872026139944837 0.010641418467518093 0.10797006504045882 195.93573571215674 1485803.2007973555 0.0153560918078552 0.021157212894688315 1.0076197390858057e-08 7.996703333341377 0.06665932803130215 AGMSSNQSIS(ph)SPVLDAVPR ddPTM_A549_MK2206_60min_R1 4 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQS(0.006)IS(0.497)S(0.497)PVLDAVPR;AGMS(0.016)S(0.013)NQS(0.075)IS(0.448)S(0.448)PVLDAVPR;AGMS(0.029)S(0.029)NQS(0.092)IS(0.425)S(0.425)PVLDAVPR;AGMS(0.005)S(0.02)NQS(0.05)IS(0.798)S(0.127)PVLDAVPR 87.38799999999999 2.4005e-06 53035300.0 4477.6 4599.6900000000005 4639.7 3901.49 6537.7 4964.6 4384.43 4885.3 7284.1 6139.8 6767.6 True False 5233.309413190343 4833.794574135536 5297.679226646034 4857.3552251445435 5576.012990438825 5489.950676765235 5181.024178018826 5577.806235603782 5634.262980317491 4752.81491572371 5087.018143741951 1.0287577644338382 0.9502216106860303 1.0414115061026938 0.9548531355485849 1.096126027641249 1.0792079999791178 1.0184795948472332 1.0964785416512812 1.107576741641616 0.9343027253737286 1.0 12.31260452449657 -6.761897041455061 24.999999066021836 1.0577196912831393 0.9940975140029333 0.16666054083465287 0.05471665619361432 12.554618229321932 685853.284612671 0.006954022913444178 0.013739816808798745 1.7302264967957723e-07 6.761897041455061 -0.06362217728020592 AGMSSNQSIS(ph)SPVLDAVPR ddPTM_A549_PD325901_60min_R1 4 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQS(0.017)IS(0.491)S(0.491)PVLDAVPR;AGMSSNQS(0.002)IS(0.499)S(0.499)PVLDAVPR;AGMSS(0.001)NQS(0.006)IS(0.496)S(0.496)PVLDAVPR;AGMSS(0.001)NQS(0.003)IS(0.498)S(0.498)PVLDAVPR 94.01 5.1562e-07 170541000.0 7781.700000000001 7906.1 7219.7 7723.9 9020.3 8212.2 8188.6 8023.1 8435.0 9940.8 11357.7 True False 8571.69245541524 8572.374793460365 7709.672257582953 8200.987760750364 8386.745246345652 8145.3225659462305 8500.22165397386 7863.072976499812 8080.506283502643 9313.136191492464 9960.774902392306 0.8605447406864453 0.8606132431927073 0.7740032611048464 0.8233282893262361 0.8419771883743086 0.8177398491346237 0.8533695156520743 0.7894037415313258 0.8112326965206217 0.9349810916072104 1.0 13.282042266348197 -10.67339347831138 0.81251216852988 1.0067643241732334 0.8245389604801147 0.7292070681264746 0.03242054893762157 0.1991834725937166 0.22056620716757513 0.022905262710938634 0.005264521002752836 2.12132163698572e-11 10.67339347831138 -0.1822253636931187 AGMSSNQSIS(ph)SPVLDAVPRT(ph)PSRER ddPTM_A549_MK2206_60min_R1 2 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSSNQS(0.002)IS(0.532)S(0.465)PVLDAVPRT(0.567)PS(0.433)RER;AGMSSNQS(0.009)IS(0.528)S(0.463)PVLDAVPRT(0.564)PS(0.436)RER 119.18 2.9721e-17 25753000.0 2933.5 3611.4 2780.41 3083.6 3871.4 3048.0 2722.2 3642.3999999999996 4734.4 4658.0 4701.2 True False 3428.60308281085 3795.204834463426 3174.713946711834 3839.0821384280625 3301.9221884125686 3370.537336901347 3216.788503272456 4158.721354382172 3662.065959283253 3605.7545648785026 3533.7622934806527 0.9702415720310876 1.0739841900133187 0.8983948786167033 1.0864007874866644 0.9343928408835535 0.9538098652304838 0.9103013264947183 1.176853735197325 1.036307950322325 1.020372697827091 1.0 11.786989281668017 AGMSSNQSIS(ph)SPVLDAVPRT(ph)PSRER ddPTM_A549_PD325901_60min_R1 2 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSSNQS(0.003)IS(0.547)S(0.45)PVLDAVPRT(0.885)PS(0.115)RER;AGMS(0.112)S(0.112)NQS(0.157)IS(0.569)S(0.051)PVLDAVPRT(0.617)PS(0.383)RER 135.49 3.3649e-23 86448000.0 5455.8 6186.799999999999 6817.799999999999 6319.0 6894.200000000001 7657.5 6612.400000000001 7641.6 7854.6 7834.599999999999 7273.2 True False 6009.668799652317 6708.183348576487 7280.496906761922 6709.310278509758 6409.975175698837 7595.139858836031 6864.0385004441205 7489.182293280767 7524.498477107274 7339.922018938796 6378.642508613517 0.9421548223680901 1.051663161796255 1.1413865719752392 1.051839834173136 1.0049121215122199 1.1907141446757354 1.0760970678596802 1.1741028413440027 1.1796394713995069 1.1507028351294493 1.0 12.639033709518523 -5.331548659404241 3.2199470228029305 1.0942207490853622 0.931132533582944 0.337211653102525 0.06578731770363379 0.3120175125114443 5.16290562255015 0.010685550020134032 0.11380145313844801 4.6607020544320395e-06 5.331548659404241 -0.16308821550241814 AGMSSNQSISS(ph)PVLDAVPR ddPTM_A549_MK2206_60min_R1 3 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMS(0.005)S(0.005)NQS(0.07)IS(0.262)S(0.657)PVLDAVPR;AGMSSNQSIS(0.142)S(0.858)PVLDAVPR;AGMSSNQSIS(0.16)S(0.84)PVLDAVPR 241.32 3.5933e-85 73045000.0 4302.18 4841.8 4092.8100000000004 4092.5 6106.2 5387.8 4276.07 5502.67 6514.1 6659.3 7864.6 True False 5028.282805797574 5088.226939000116 4673.232001122738 5095.162683719308 5207.986068834229 5957.933419867812 5052.976568653391 6282.69032372011 5038.666750880163 5154.95950491529 5911.602768082176 0.850578599926604 0.860718681314716 0.7905186096661251 0.8618919240022389 0.8809769994954832 1.0078372403565041 0.8547557687629715 1.0627727488121332 0.8523351362653874 0.8720070862588838 1.0 12.529333615077851 -6.932630812531527 3.161910233788803 0.9384508218902674 0.8382600152527483 0.3415980651150592 0.0651938948336705 0.24007780786471222 4.87832810487339 0.010175271057648667 0.020071347988139553 1.1678019267836857e-07 6.932630812531527 -0.10019080663751911 AGMSSNQSISS(ph)PVLDAVPR ddPTM_A549_PD325901_60min_R1 3 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQS(0.014)IS(0.208)S(0.778)PVLDAVPR;AGMSSNQS(0.002)IS(0.187)S(0.81)PVLDAVPR;AGMSSNQS(0.001)IS(0.086)S(0.913)PVLDAVPR 279.27 2.5872999999999994e-126 52200900.0 8765.470000000001 8634.18 7741.530000000001 8715.119999999999 10009.5 8477.04 8570.83 8996.2 8775.599999999999 9965.4 9474.3 True False 9655.334061602038 9361.812650257345 8266.916779401652 9253.4331689264 9306.46725090039 8408.00579679366 8896.997625788139 8816.763733617629 8406.792049971047 9336.182943294192 8309.021162536024 1.1620302647845346 1.1267046342917237 0.9949326903481467 1.1136610423678508 1.120043753512349 1.0119129115597802 1.0707636256726847 1.0611073869171173 1.011766835770723 1.1236200703627361 1.0 13.020462816154547 -2.0000000000001124 0.15086258109533565 0.9792293414325656 1.5656254607539788 0.040670849948465926 0.0562550000180842 35.749526695565656 0.3359230745916828 0.07179295838803826 4.634249561527235 0.009999999999997414 2.0000000000001124 0.5863961193214132 AGMSSNQSISS(ph)PVLDAVPRT(ph)PSR ddPTM_A549_MK2206_60min_R1 5 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSSNQS(0.001)IS(0.035)S(0.963)PVLDAVPRT(0.978)PS(0.022)R;AGMSSNQSIS(0.449)S(0.552)PVLDAVPRT(0.871)PS(0.128)R;AGMSSNQSIS(0.251)S(0.753)PVLDAVPRT(0.944)PS(0.052)R;AGMSSNQS(0.002)IS(0.114)S(0.884)PVLDAVPRT(0.931)PS(0.069)R;AGMSSNQS(0.003)IS(0.126)S(0.871)PVLDAVPRT(0.968)PS(0.032)R 148.66 1.2374e-27 112822000.0 13387.199999999999 13977.300000000001 13467.3 11560.9 18263.3 13680.5 11781.5 12680.2 19939.2 19172.899999999998 20312.100000000002 True False 15646.63207438399 14688.684868124725 15377.165646272415 14393.321018988516 15576.792763247216 15128.16142961905 13922.046047793863 14477.657181483853 15423.003036359538 14841.728573842649 15268.044984558912 1.024796042336 0.9620540732608456 1.0071469963458886 0.9427088427853707 1.0202218279419895 0.9908381488866891 0.9118420899253111 0.9482325468732634 1.0101491744330948 0.972077865165618 1.0 13.898227721864265 -8.794081691332417 24.98926608872923 1.0047926727248702 0.9752777745468373 0.027703428495339244 0.034169170482992915 266.5984277272309 204092.64021148125 0.005583331487908121 0.00594409994288161 1.6066390137904254e-09 8.794081691332417 -0.029514898178032878 AGMSSNQSISS(ph)PVLDAVPRT(ph)PSR ddPTM_A549_PD325901_60min_R1 3 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSS(0.001)NQS(0.001)IS(0.26)S(0.739)PVLDAVPRT(0.965)PS(0.035)R;AGMS(0.001)S(0.003)NQS(0.012)IS(0.184)S(0.8)PVLDAVPRT(0.64)PS(0.36)R;AGMSSNQS(0.003)IS(0.151)S(0.845)PVLDAVPRT(0.968)PS(0.032)R 117.88 1.5671e-15 218632000.0 12235.3 12165.599999999999 11818.0 11368.699999999999 13470.4 11316.0 11667.1 11935.2 10889.599999999999 13325.9 14138.2 True False 13477.4186488482 13190.837807176917 12620.040547407143 12070.918778808966 12524.285574357225 11223.846247807836 12111.097874982086 11697.143073016725 10431.947981604071 12484.500399787676 12399.291029434044 1.0869507471721442 1.0638380675043324 1.017803398391817 0.9735168527099193 1.010080781604889 0.9052006458404857 0.9767572876733169 0.9433719270924018 0.8413342308717654 1.0068721163291803 1.0 13.597970011648625 -6.118999715013999 0.7001380350535499 0.9271360036908042 1.1099587446966783 0.4715034008655522 0.047997832650134076 0.8632722287139181 0.540546996848063 0.010239709077539879 0.09920623159402882 7.603267758698838e-07 6.118999715013999 0.18282274100587415 AGMSSNQSISS(ph)PVLDAVPRT(ph)PSRER ddPTM_A549_MK2206_60min_R1 2 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMS(0.177)S(0.192)NQS(0.192)IS(0.192)S(0.248)PVLDAVPRT(0.822)PS(0.176)RER;AGMSSNQS(0.011)IS(0.452)S(0.537)PVLDAVPRT(0.888)PS(0.112)RER 120.18 2.5995e-17 20283500.0 1932.6999999999998 2706.0 2779.8999999999996 2481.3 2931.3 2044.3 2333.5 2369.5 3625.7 3182.1 3805.2 True False 2258.892510021656 2843.7238417394974 3174.1316210430205 3089.218611389792 2500.1096530696286 2260.626469103486 2757.466744686753 2705.383881289411 2804.484739053159 2463.261399935568 2860.263821822636 0.7897497051800731 0.9942173236059746 1.1097338632980993 1.0800467382834846 0.8740835841766835 0.7903559286579918 0.9640602813098624 0.945851169618846 0.9804986231186419 0.861200767964793 1.0 11.481932507498378 -8.934196876857595 2.180126284124724 0.9926706518000956 0.9483265451584729 0.0 0.10392449194461917 0.911863367519781 8.567122800136417 0.019400848538206884 0.019821615922303127 1.1635984207413281e-09 8.934196876857595 -0.044344106641622694 AGMSSNQSISS(ph)PVLDAVPRT(ph)PSRER ddPTM_A549_PD325901_60min_R1 2 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSSNQSIS(0.179)S(0.821)PVLDAVPRT(0.893)PS(0.107)RER;AGMSSNQS(0.001)IS(0.207)S(0.792)PVLDAVPRT(0.967)PS(0.033)RER 149.54 1.0642999999999998e-31 63684000.0 4455.3 4288.9 4332.1 4532.3 3904.8 3944.4 3651.8999999999996 4302.299999999999 3755.0 5151.9 4834.2 True False 4907.598776181488 4650.3406548958565 4626.102357033548 4812.24987739987 3630.540318828698 3912.27811416165 3790.8750528963574 4216.487251410942 3597.1904083642457 4826.608154771246 4239.624046518652 1.157555179971993 1.096875714419646 1.091158627810938 1.1350652380018051 0.8563354389429647 0.9227889244977274 0.8941535879836368 0.9945427248138409 0.848469196535967 1.1384519244659423 1.0 12.049720622499903 -6.752202728275409 24.998314466477794 0.9247575532318897 1.116428514512213 0.4915960813759719 0.08016930764127846 84.8583910145992 229661.1953242567 0.00866894609940288 0.017850041091674006 1.7692828658647371e-07 6.752202728275409 0.19167096128032335 AGMSSNQSISS(ph)PVLDAVPRTPS(ph)R ddPTM_A549_MK2206_60min_R1 1 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMS(0.004)S(0.006)NQS(0.052)IS(0.264)S(0.679)PVLDAVPRT(0.449)PS(0.546)R 56.474 0.0022851 15810000.0 3076.3 3386.2 3205.2 3449.5 4703.0 2649.3 3070.6 2466.7 5365.3 4428.6 5025.9 True False 3595.5042316860495 3558.5431163703947 3659.7455562311925 4294.627654853942 4011.1949300264287 2929.6471675369903 3628.4882735098076 2816.3622789519277 4150.06811662353 3428.17618420372 3777.8303222165423 0.9517378825993652 0.941954194036569 0.9687427025795943 1.1367973912428608 1.0617721252427679 0.7754840523960052 0.9604688310566812 0.7454972930863399 1.0985321633472906 0.9074457801991297 1.0 11.883342190519128 AGMSSNQSISSPVLDAVPRT(ph)PSR ddPTM_A549_MK2206_60min_R1 1 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQSISSPVLDAVPRT(0.851)PS(0.149)R 116.28 1.3669e-15 18548000.0 2166.9 2100.0 1707.8 1614.4 2518.3 1972.3 1951.6 1901.6 3377.6 2911.2 2448.9 True False 2532.619744381398 2206.8810301747776 1949.9917199961417 2009.928072473169 2147.861405971837 2181.0074768932186 2306.1804580804223 2171.157623405758 2612.5789929188713 2253.55789808379 1840.7705437983436 1.3758476051857371 1.1988898005837176 1.0593344871612436 1.0918949562968217 1.1668273447812925 1.1848339730560942 1.252834290428033 1.1794830326465764 1.4192855278572294 1.2242470446282125 1.0 10.846094087365374 -7.527880493280987 23.862008772012235 1.2056791854564382 1.1690081456049166 0.016575112619349075 0.11787558586706152 462.0385894117882 2204259.6460418897 0.02527947813653038 0.03758212204910101 2.9656473474527653e-08 7.527880493280987 -0.036671039851521536 AGMSSNQSISSPVLDAVPRT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQSISSPVLDAVPRT(0.991)PS(0.009)R;AGMSSNQSISSPVLDAVPRT(0.994)PS(0.006)R 144.43 1.6476e-27 52130000.0 6243.299999999999 6606.2 6497.7 6231.6 8429.3 7251.8 7306.0 7066.6 7047.5 7368.799999999999 8855.3 True False 6877.115219925457 7162.927658460919 6938.672995844255 6616.511779009559 7837.255047506336 7192.743745126625 7584.033827996598 6925.651119359548 6751.318083341421 6903.532710432728 7766.154238371732 0.8855239039609039 0.9223262168899072 0.8934503208243043 0.8519675988815786 1.0091552146599538 0.9261654513102575 0.9765494729070282 0.8917735737388077 0.869325779030229 0.8889255220200387 1.0 12.922984644589954 -10.993990796156323 1.2772466289934252 0.999884612789027 0.9113355813239563 0.0 0.054124245811989796 0.4153277635053854 1.2084279722309768 0.031707244927718405 0.0072896290684558605 1.0139328734165132e-11 10.993990796156323 -0.08854903146507065 AGMSSNQSISSPVLDAVPRT(ph)PSRER ddPTM_A549_MK2206_60min_R1 2 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQSISSPVLDAVPRT(0.885)PS(0.115)RER;AGMSSNQSISS(0.001)PVLDAVPRT(0.5)PS(0.5)RER 150.24 9.5619e-33 33022000.0 2369.0 4066.6099999999997 2328.64 2174.87 3232.3 2736.57 2123.1000000000004 2182.52 5177.9 3663.4 4859.71 True False 2768.82928351079 4273.583079104313 2658.8761674972548 2707.7132476336237 2756.83295180192 3026.152021011853 2508.8397881484657 2491.8988936871774 4005.1139174072223 2835.8353956582027 3652.9098858272055 0.7579790824442376 1.169911991446938 0.7278789377787099 0.7412483012896605 0.7546950343609783 0.8284223032035123 0.6868058250991692 0.6821681814148788 1.0964173884897956 0.7763222976457369 1.0 11.834830448744231 -8.77087710714009 24.999598975130294 1.0455304477831273 0.7985430424557308 0.12191934719520992 0.15190181639405984 136.36720920470623 361222.017009368 0.022732335547425073 0.02435644472599198 1.6948173172034297e-09 8.77087710714009 -0.2469874053273965 AGMSSNQSISSPVLDAVPRT(ph)PSRER ddPTM_A549_PD325901_60min_R1 4 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQSISSPVLDAVPRT(0.5)PS(0.5)RER;AGMSSNQSISSPVLDAVPRT(0.814)PS(0.186)RER;AGMSSNQSISSPVLDAVPRT(0.764)PS(0.235)RER;AGMSSNQSIS(0.002)S(0.007)PVLDAVPRT(0.916)PS(0.075)RER 143.07 2.7771e-32 82255500.0 7311.700000000001 11549.7 7590.4 9377.4 8764.300000000001 9759.3 7876.299999999999 9296.1 12826.2 8685.5 14199.099999999999 True False 8053.97840141095 12523.033752675678 8105.530188783143 9956.62070037939 8148.725803193594 9679.823496485598 8176.036906576735 9110.681992850625 12287.159418311981 8137.0960477233 12452.700715510933 0.6467655961071169 1.0056480147376494 0.6509054038925863 0.7995551268631667 0.6543741786907028 0.7773272415058147 0.6565673658560478 0.7316229789014739 0.9867063939798412 0.6534402643747659 1.0 13.604171044439777 -8.764299759606988 23.306848297754595 0.993722513640551 0.7437558047911011 0.016464960523049132 0.1422146847993468 14.95429764993249 121849.76488980271 0.015530986163321905 0.01690324982464474 1.7206805134703476e-09 8.764299759606988 -0.24996670884944983 AGMSSNQSISSPVLDAVPRTPS(ph)RER ddPTM_A549_MK2206_60min_R1 2 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQSISSPVLDAVPRT(0.403)PS(0.596)RER;AGMSSNQSISSPVLDAVPRT(0.418)PS(0.581)RER 125.42 4.9592000000000005e-18 32239000.0 3358.3900000000003 2906.88 2817.82 2553.8199999999997 3987.0 3132.6499999999996 1965.75 2555.27 5267.5 4165.6 4821.900000000001 True False 3925.2041272477 3054.827775711647 3217.429247241788 3179.5060146453343 3400.517581546962 3464.1449437152264 2322.901329919855 2917.4873476861762 4074.419660469021 3224.5880668651553 3624.4891523301208 1.0829675472264153 0.8428298850743564 0.8876917855233085 0.8772287296269835 0.938206030872193 0.9557608805335196 0.6408906834295538 0.804937530523598 1.1241362545807725 0.8896669106574988 1.0 11.82356195583518 -8.76219751619116 24.99989721209788 1.058619901181799 0.8744715706163091 0.14504578920390288 0.11716074577655432 15.824762645975573 521825.3083275539 0.018856082200326217 0.020658037085958744 1.7290298213472684e-09 8.76219751619116 -0.18414833056548985 AGMSSNQSISSPVLDAVPRTPS(ph)RER ddPTM_A549_PD325901_60min_R1 2 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQSISS(0.001)PVLDAVPRT(0.421)PS(0.578)RER;AGMSSNQSISSPVLDAVPRT(0.429)PS(0.571)RER 126.36 1.1733e-18 47702000.0 2554.8599999999997 4632.4 2840.5 3203.5 3199.3 3264.2 2748.1 2987.8999999999996 4434.9 3319.2 4569.3 True False 2814.2275064114756 5022.788605409213 3033.273411314094 3401.3729193236295 2974.5922049858254 3237.61743744206 2852.6804493180216 2928.303990537795 4248.516575780186 3109.625145541783 4007.305067179198 0.7022743363016414 1.2534080937703176 0.7569359857719195 0.8487931071636398 0.7422924272345668 0.807928865700526 0.71187004769918 0.7307414687544794 1.0601929487666335 0.7759891232165896 1.0 11.968416627760847 -8.772753684816903 24.99109799591734 1.0284244636363093 0.8261320489982459 0.043741307740110424 0.164665946334905 198.0619097658858 437478.81493525236 0.024761247927525952 0.026474625078695756 1.6875098449271348e-09 8.772753684816903 -0.20229241463806347 AGMTHIVR ddPTM_A549_MK2206_60min_R1 1 AGMTHIVR 8 0 P39023;H7C422;H7C3M2;F8WCR1 P39023 RPL3 60S ribosomal protein L3 0 50.703 0.035285000000000004 2364500.0 402.19 400.67 426.36 194.72 534.19 577.83 606.29 460.78 658.96 782.33 711.5 False True 470.06983939856696 421.0623916000611 486.8242591272717 242.426408741313 455.61135863721387 638.9755870674888 716.445045055124 526.0969760795673 509.70661214288845 605.6011096482175 534.8149135989714 0.8789392880525518 0.7873048804240954 0.9102667983793636 0.4532902927293747 0.8519047376058253 1.1947602260520016 1.3396130639549575 0.9836991503083976 0.9530523535944057 1.1323564363097114 1.0 9.062895886087228 -7.009884603934375 24.958466892622546 1.021582744283539 0.7557606656496272 0.4766445176023141 0.15998022983168209 391.47299617185183 988466.5223436059 0.023789821666459186 0.043153753060667766 9.774969164353413e-08 7.009884603934375 -0.26582207863391183 AGMTHIVR ddPTM_A549_PD325901_60min_R1 4 AGMTHIVR 8 0 P39023;H7C422;H7C3M2;F8WCR1 P39023 RPL3 60S ribosomal protein L3 0 ;;; 53.166000000000004 0.029388 12215100.0 1622.56 2099.5299999999997 1701.3 1695.7 2331.7200000000003 2300.33 2059.41 1857.4399999999998 2210.5099999999998 2399.04 2241.0299999999997 False True 1787.28109673446 2276.4647614011765 1816.7604487479912 1800.4395377858825 2167.948031197309 2281.5968751519795 2137.781974502393 1820.3919020665085 2117.609951955593 2247.5642049772723 1965.3975170596368 0.9093738448435356 1.1582719229272846 0.924373025293114 0.9160688981023329 1.1030582934900115 1.1608831574008487 1.0877097156918436 0.9262207193534739 1.0774461316729838 1.1435672353650752 1.0 10.940605423044023 -5.185800095975565 21.80066517598639 1.03659532029097 0.9093650245491098 0.15093724809565112 0.09097286460800272 58903.93545601066 16971929.526452128 0.011393799509639002 115.70334223190827 6.519284050631491e-06 5.185800095975565 -0.12723029574186007 AGMTSS(ph)PDATTGQTFG ddPTM_A549_MK2206_60min_R1 4 AGMTSSPDATTGQTFG 16 0 Q9UQR1;G5E9X2;Q9UQR1-2 Q9UQR1 ZNF148 Zinc finger protein 148 1 AGMT(0.023)S(0.149)S(0.822)PDAT(0.002)T(0.002)GQT(0.002)FG;AGMT(0.029)S(0.128)S(0.843)PDATTGQTFG;AGMT(0.017)S(0.12)S(0.862)PDAT(0.001)TGQTFG;AGMT(0.017)S(0.115)S(0.863)PDAT(0.002)T(0.002)GQTFG 94.12200000000001 4.0661e-06 24615200.0 5614.3 5818.799999999999 5534.999999999999 5103.780000000001 6879.5 5353.08 4844.5 5071.5599999999995 7598.7 7731.1 9176.6 True False 6561.856583543531 6114.9520658957135 6319.946229171236 6354.206329117393 5867.534663218544 5919.539372513077 5724.6829417762865 5790.469161001113 5877.606582630456 5984.639140517862 6897.796958724275 0.9512974392851837 0.8865079825467426 0.9162267702266622 0.9211935879151454 0.8506389356383324 0.8581782571935658 0.8299291753631217 0.8394664551088847 0.8520991003071653 0.8676160194811969 1.0 12.751919947390574 -10.757062262476941 1.0155202435467197 0.9997513772872014 0.8762154603395329 0.0 0.05260823449034551 0.30540768082206377 0.5611226613558786 0.026816637670065247 0.006892833254793425 1.7495958404461994e-11 10.757062262476941 -0.12353591694766852 AGMTSS(ph)PDATTGQTFG ddPTM_A549_PD325901_60min_R1 2 AGMTSSPDATTGQTFG 16 0 Q9UQR1;G5E9X2;Q9UQR1-2 Q9UQR1 ZNF148 Zinc finger protein 148 1 AGMT(0.032)S(0.179)S(0.789)PDATTGQT(0.001)FG;AGMT(0.025)S(0.14)S(0.835)PDATTGQTFG 101.53 4.2989e-07 17257200.0 5656.1 5118.6 5198.9 5643.9 6604.9 6036.4 5713.0 5968.700000000001 5801.7 6537.4 7536.6 True False 6230.303108199251 5549.96238572826 5551.728617525385 5992.510884773102 6140.994609668017 5987.24155976204 5930.411341273554 5849.649596145433 5557.8747249552225 6124.627448320336 6609.645978443685 0.9426076870861767 0.8396761950380679 0.8399434153707278 0.9066311424721881 0.9290958441187168 0.9058339250375106 0.897235852058439 0.8850170818865549 0.8408732847540326 0.9266195902616933 1.0 12.690357285771526 -10.920642846098815 1.1470467866946947 1.000708637030561 0.8833313243160209 0.29867389012007073 0.03944664904565518 0.27725410248818194 0.6416312378627318 0.026032690404336936 0.006001304477890548 1.200486149810712e-11 10.920642846098815 -0.11737731271454 AGNALT(ph)PELAPVQIK ddPTM_A549_MK2206_60min_R1 2 AGNALTPELAPVQIK 15 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 AGNALT(1)PELAPVQIK;AGNALT(1)PELAPVQIK 113.72 1.2416e-06 6197400.0 3390.6 3683.5 4108.6 3145.1 5981.1 4977.5 3906.4 4263.1 6015.6 5469.0 5452.4 True False 3962.8503877888065 3870.974416499427 4691.261260555187 3915.6496411889048 5101.288113115263 5504.215746202909 4616.142314739372 4867.407480196196 4653.076204939238 4233.54910161454 4098.418601415362 0.9669218235590338 0.9445044035186185 1.1446515636384946 0.9554050042220336 1.2446967011504306 1.343009653602017 1.1263228000051575 1.187630633560776 1.1353345417992025 1.032971375874712 1.0 12.000851629514887 -5.754723030640379 24.975946516587253 1.104970594676331 0.9557130426092043 0.2609693659361292 0.10651290550623323 191.0816416787098 710551.3723963124 0.01615497040657563 0.05979213660987773 1.759045079432454e-06 5.754723030640379 -0.14925755206712676 AGNLGGGVVTIER ddPTM_A549_MK2206_60min_R1 1 AGNLGGGVVTIER 13 0 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;P35268 K7EJT5 RPL22 60S ribosomal protein L22 0 119.74 3.2255e-05 3655500.0 1925.1 2506.4 1952.8 1675.1 2926.1 2249.6 2543.3 1850.3 3267.6 3194.5 2957.0 False True 2250.0098158238166 2633.9650543000307 2229.7364040335315 2085.4995751980955 2495.6745661812315 2487.651178836375 3005.384688991566 2112.5856913060975 2527.4938172849666 2472.8602313233964 2222.6952909517345 1.012288920115715 1.1850320037220194 1.003167826516959 0.9382750679716907 1.1228145289823375 1.1192047731253298 1.3521352662355675 0.9504612260196542 1.137130144457507 1.112550263362705 1.0 11.11809446768107 -4.970977826781045 18.740241139951646 1.0782575093836966 0.7814994820657748 0.026507873112878944 0.1137794825230048 5983.34748599759 38132.12072992415 0.015033480365762544 60175.19061016707 1.069109461986272e-05 4.970977826781045 -0.2967580273179218 AGNLGGGVVTIER ddPTM_A549_PD325901_60min_R1 2 AGNLGGGVVTIER 13 0 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;P35268 K7EJT5 RPL22 60S ribosomal protein L22 0 ; 187.85 6.4884e-25 13903000.0 6096.5 6337.8 6490.4 6738.5 7443.8 6870.2 6479.299999999999 6824.299999999999 7268.6 7498.7 6936.7 False True 6715.412191993904 6871.908648511032 6930.877573945787 7154.721840756134 6920.973167715901 6814.251369007547 6725.873307109001 6688.183982940218 6963.126019237378 7025.230802263855 6083.529875364263 1.10386770996038 1.1295923237493042 1.1392855325676834 1.1760806616122241 1.137657463595754 1.1201147209948616 1.1055872897651016 1.0993919845819364 1.144586475597845 1.1547951512021146 1.0 12.570692953061979 -10.916722319055554 0.6220238661789245 0.9739363620533212 1.1319329977393968 0.0 0.05070696680778231 0.3961718416140098 0.1979915039712192 0.03628004353913648 0.004667103373153259 1.2113724181376998e-11 10.916722319055554 0.15799663568607558 AGNS(ph)DS(ph)EEDDANGRVELILEPK ddPTM_A549_PD325901_60min_R1 2 AGNSDSEEDDANGRVELILEPK 22 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 AGNS(1)DS(1)EEDDANGRVELILEPK;AGNS(1)DS(1)EEDDANGRVELILEPK 145.65 1.8863e-27 28384000.0 11037.3 11522.400000000001 11649.8 12082.8 12739.8 11725.5 11595.6 13075.5 12129.7 12784.3 13619.6 True False 12157.798570769193 12493.433085866322 12440.425483938368 12829.127113970204 11845.000397924054 11630.011415577128 12036.87690335579 12814.698894968684 11619.930891167984 11977.097116217717 11944.475541757782 1.01785955593158 1.0459591165965714 1.0415212824076494 1.0740636597328772 0.9916718701054756 0.9736728393740445 1.0077359078073351 1.07285571896134 0.9728288906904959 1.0027311014490248 1.0 13.544055888855114 -6.782022881433977 24.950746081396595 0.9942883303688372 1.0446922309556483 0.3038124301941789 0.0285151674027249 180.21717345819633 218453.85934234216 0.004328920377136226 0.008187275904697965 1.651874764521112e-07 6.782022881433977 0.0504039005868111 AGNS(ph)DSEEDDANGR ddPTM_A549_PD325901_60min_R1 2 AGNSDSEEDDANGR 14 0 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AGNS(0.98)DS(0.02)EEDDANGR;AGNS(0.91)DS(0.09)EEDDANGR 140.27 2.7217e-10 4597100.0 1220.8400000000001 1132.5 1335.85 1265.98 1450.3000000000002 1062.1 1372.77 1048.8600000000001 1412.62 1874.1799999999998 1837.21 True False 1344.7787780650933 1227.9397495090964 1426.5088141186172 1344.176709350813 1348.4359312633837 1053.4506097381332 1425.011513558567 1027.9396644852472 1353.2524939183763 1755.843954950441 1611.2448170337461 0.8346210109403431 0.7621062525865542 0.8853457891922207 0.8342473441282514 0.8368907797300563 0.6538116359483498 0.8844165073449055 0.6379785701204945 0.8398801222583133 1.0897437412291557 1.0 10.65396000247214 -10.05096513225669 0.8861931240604483 0.9855851538164898 0.7955471751357606 0.5299187094163955 0.08612860739838699 0.3267613728199959 0.5161344280584987 0.032116965939117434 0.015112031245203656 8.892725110767514e-11 10.05096513225669 -0.19003797868072925 AGNS(ph)DSEEDDANGRVELILEPK ddPTM_A549_MK2206_60min_R1 2 AGNSDSEEDDANGRVELILEPK 22 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AGNS(0.93)DS(0.07)EEDDANGRVELILEPK;AGNS(0.776)DS(0.224)EEDDANGRVELILEPK 64.779 0.00029957 9400500.0 2559.0 3262.9 2790.8 2424.6 4374.9 2832.6 3191.3 2746.4 4765.9 3659.8999999999996 4668.799999999999 True False 2990.896638456782 3428.9676730272768 3186.5774049450943 3018.627108844429 3731.3580053949863 3132.3438518722974 3771.117901143703 3135.7106104972527 3686.4312595784154 2833.126048089058 3509.40810767516 0.8522510197419386 0.9770786320143394 0.9080099285050299 0.860152771130442 1.063244253990984 0.8925561678112574 1.0745737701170113 0.8935155200785506 1.0504424525366831 0.8072945525751032 1.0 11.777012012591273 -7.0482810399574785 0.5783923355596663 1.0201074532880887 0.8947950477120548 0.0 0.0943723604391477 0.8914382017660898 0.5259860022177754 0.013661211869439803 0.05178163289509132 8.947855459522563e-08 7.0482810399574785 -0.12531240557603396 AGNS(ph)DSEEDDANGRVELILEPK ddPTM_A549_PD325901_60min_R1 2 AGNSDSEEDDANGRVELILEPK 22 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AGNS(0.996)DS(0.004)EEDDANGRVELILEPK;AGNS(0.978)DS(0.022)EEDDANGRVELILEPK 168.72 1.3758999999999998e-40 22812000.0 3783.9 4478.2 3938.2 4642.7 4726.9 4434.1 5157.4 4906.6 4396.1 4482.9 4946.1 True False 4168.038742440046 4855.59363024427 4205.469934320427 4929.469034663277 4394.8988509197325 4397.990159721168 5353.667679237567 4808.734013846761 4211.34720484955 4199.848928943502 4337.761055911198 0.9608732912478278 1.119377846695222 0.9695024414932919 1.1364086152107757 1.0131721858977618 1.0138848366781048 1.2342006879198573 1.108575127090911 0.9708573502707392 0.9682066104633036 1.0 12.082734869496553 -8.770315193713692 24.971734954160787 0.9862381879586745 1.0718177244523872 0.21277362608502193 0.07656072418548181 210.09563665283702 591093.4162201922 0.012750498596144154 0.013671723098195244 1.697011581708131e-09 8.770315193713692 0.08557953649371275 AGPDLPSLPSHALEDEGWAAAAPS(ph)PGSAR ddPTM_A549_MK2206_60min_R1 2 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGPDLPSLPSHALEDEGWAAAAPS(0.857)PGS(0.143)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.82)PGS(0.18)AR 125.02 1.2114000000000001e-21 32413000.0 1256.81 1674.58 1435.23 1108.21 2321.8999999999996 1599.8000000000002 1541.71 1577.46 2450.1 1868.1100000000001 2613.6 True False 1468.9288019456294 1759.8089692905141 1638.7671953917677 1379.721499749438 1980.3515858023304 1769.0897741387055 1821.81875078252 1801.069785768642 1895.1562620057223 1446.1026535412582 1964.5709883095885 0.7477097089831132 0.8957726545706238 0.8341603358409776 0.7023016770377011 1.0080325921469095 0.9004967418667398 0.9273366865455448 0.9167751109459116 0.9646667253477086 0.7360908117581205 1.0 10.939998584111446 -6.875829065028518 0.3304967899286957 1.0001036185754553 0.7472534171851661 0.0 0.10327634238848148 1.5261968550944958 0.24923008906270688 0.027786729537763986 0.13857129696910284 1.3309781776825358e-07 6.875829065028518 -0.25285020139028913 AGPDLPSLPSHALEDEGWAAAAPS(ph)PGSAR ddPTM_A549_PD325901_60min_R1 2 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGPDLPSLPSHALEDEGWAAAAPS(0.787)PGS(0.213)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.799)PGS(0.201)AR 174.16 9.465699999999999e-58 73107000.0 2427.1 2357.5 2244.95 3208.7 2269.25 2788.8 2514.2 2386.2 2436.3999999999996 3310.2 3281.2 True False 2673.4974052634143 2556.1747986469704 2397.305806981017 3406.89411151357 2109.865708487509 2766.0889374236945 2609.879256823029 2338.605369062313 2334.0065808092268 3101.1934070777343 2877.633201240536 0.9290612174306581 0.8882906958207926 0.833082481098546 1.183922297687166 0.7331948031382021 0.9612374976182666 0.9069534142495718 0.8126836207109891 0.8110855058952774 1.07768891662107 1.0 11.490666994712553 AGPEEPGDS(ph)PPLR ddPTM_A549_MK2206_60min_R1 4 AGPEEPGDSPPLR 13 0 A0A0A0MTG6;Q12770-4;Q12770-2;Q12770 A0A0A0MTG6 SCAP Sterol regulatory element-binding protein cleavage-activating protein 1 AGPEEPGDS(1)PPLR;AGPEEPGDS(1)PPLR;AGPEEPGDS(1)PPLR;AGPEEPGDS(1)PPLR 181.76 4.549e-25 55511900.0 4448.3 4535.68 4391.18 3927.8199999999997 5022.79 3998.4 3758.95 4166.43 5982.64 6003.139999999999 6920.74 True False 5199.064289506564 4766.526738544351 5013.915353678801 4890.13607632654 4283.944244649679 4421.5080340768845 4441.902558363089 4757.034211656743 4627.581592312931 4647.0265046381965 5202.129255292965 0.9994108247534829 0.916264572567972 0.9638198336916246 0.9400258694746993 0.8234982320539097 0.8499419789652807 0.853862397564156 0.9144398338077901 0.8895552888472631 0.893293164507596 1.0 12.344886530473845 -10.710516367052035 0.9197188462491812 1.0012073867581128 0.9029538820566435 0.0 0.05792941755563416 0.5711374790081205 0.8416980483323273 0.037747041035099876 0.009350955270406473 1.9475276530000077e-11 10.710516367052035 -0.09825350470146932 AGPEEPGDS(ph)PPLR ddPTM_A549_PD325901_60min_R1 3 AGPEEPGDSPPLR 13 0 A0A0A0MTG6;Q12770-4;Q12770-2;Q12770 A0A0A0MTG6 SCAP Sterol regulatory element-binding protein cleavage-activating protein 1 AGPEEPGDS(1)PPLR;AGPEEPGDS(1)PPLR;AGPEEPGDS(1)PPLR 161.23 1.2717000000000001e-18 63420900.0 6660.450000000001 6958.82 6300.4 6286.92 8266.89 7399.27 8239.0 7040.59 7113.97 7381.2 8578.3 True False 7336.613980835859 7545.264183380915 6727.983031382972 6675.24876976872 7686.252165622251 7339.012798340153 8552.539653553793 6900.159909213996 6814.994580397074 6915.149772316529 7523.223482324056 0.9751955392623071 1.002929688465143 0.8942952508576256 0.8872857207355773 1.0216700572143356 0.975514394273052 1.1368185025538764 0.917181302061017 0.9058609778652758 0.9191737808352755 1.0 12.877135231873325 AGPEGTS(ph)PPTPTPSTATGGPPEDSPTVAPK ddPTM_A549_MK2206_60min_R1 2 AGPEGTSPPTPTPSTATGGPPEDSPTVAPK 30 0 Q9UMN6;A0A669KBI7;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 AGPEGT(0.141)S(0.791)PPT(0.066)PT(0.002)PSTATGGPPEDSPTVAPK;AGPEGT(0.1)S(0.431)PPT(0.431)PT(0.022)PS(0.005)T(0.005)AT(0.005)GGPPEDSPTVAPK 82.336 1.5788e-06 7376300.0 2190.7 2923.6 2195.8 2383.1000000000004 4067.3999999999996 3039.8 2565.5 2960.9 3986.6 3963.6000000000004 4197.1 True False 2560.4366025272643 3072.398752294751 2507.197457997148 2966.9596069814233 3469.090848052199 3361.4696183440687 3031.618141630112 3380.616642375952 3083.6414652920353 3068.2200071602488 3154.84423593288 0.8115889124935353 0.9738670192654535 0.79471354859324 0.9404456718301657 1.09960764735708 1.0654946383906303 0.960940672474649 1.0715637253565742 0.9774306541572281 0.9725424704693806 1.0 11.623353061472244 -6.521828666802884 24.998834082649996 1.0060115623411428 0.870794547943352 0.5688867018953515 0.06069123198370885 22.358631390284543 532280.6864935947 0.008128709191429955 0.017094515852255434 3.0072624615427165e-07 6.521828666802884 -0.13521701439779077 AGPEGTS(ph)PPTPTPSTATGGPPEDSPTVAPK ddPTM_A549_PD325901_60min_R1 1 AGPEGTSPPTPTPSTATGGPPEDSPTVAPK 30 0 Q9UMN6;A0A669KBI7;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 AGPEGT(0.154)S(0.632)PPT(0.154)PT(0.034)PS(0.008)T(0.008)AT(0.008)GGPPEDSPTVAPK 68.304 0.00014388 7046300.0 1094.8 1619.4 1375.5 1595.2 1860.8 1554.8 1278.7 1862.5 2120.6 2019.0 2107.8 True False 1205.9432900508366 1755.8725212847946 1468.8497015534365 1693.7318810379443 1730.1038274115044 1542.138224292298 1327.3616282314886 1825.3509763970146 2031.4785565851462 1891.5199954353038 1848.553962445081 0.6523711585112377 0.9498627343084447 0.7945938995530268 0.9162469235129314 0.9359228145674997 0.8342403065434524 0.7180540331512899 0.9874480342367848 1.09895550676709 1.023243050440027 1.0 10.852181443532439 -8.464422757972457 6.8513867648393045 1.0466341591070278 0.8401207606555937 0.544994024727751 0.08778661360185061 0.1372303835175854 13.490050387683128 0.01418022532360631 0.01708348922875947 3.432236788759426e-09 8.464422757972457 -0.20651339845143413 AGPGTLSVTIEGPSK ddPTM_A549_PD325901_60min_R1 1 AGPGTLSVTIEGPSK 15 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95 O75369-8 FLNB Filamin-B 0 117.2 2.4054e-06 1585300.0 2444.8 2171.0 3128.7 2776.1 2686.9 3047.2 2615.3 3040.8 3380.1 3135.7 3580.4 False True 2692.9942962333635 2353.957789125163 3341.032396401481 2947.5733920194566 2498.18141330179 3022.38461349594 2714.826672647072 2980.148858538548 3238.0461516143787 2937.711366858091 3140.0334980256052 0.8576323462557544 0.7496600882141187 1.0640117051306173 0.9387076264864168 0.7955906887211873 0.9625326020873214 0.8645852581999857 0.9490818682069508 1.0312138878933623 0.9355668876479405 1.0 11.616564234599894 -8.546807199926796 3.7993869726741742 1.0145258822312866 0.892920124225589 0.20196271191371618 0.08263991573006595 0.19174268779457798 6.064832964825799 0.013202904602337159 0.015316001864918478 2.8391791698615493e-09 8.546807199926796 -0.12160575800569762 AGPLT(ph)PPKPPR ddPTM_A549_MK2206_60min_R1 4 AGPLTPPKPPR 11 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 AGPLT(1)PPKPPR;AGPLT(1)PPKPPR;AGPLT(1)PPKPPR;AGPLT(1)PPKPPR 96.059 0.00011206 88465900.0 17357.1 18988.9 17310.1 16802.800000000003 23909.300000000003 18441.300000000003 17565.6 18600.3 27049.3 26378.4 28304.4 True False 20286.554139647582 19955.353901850405 19764.932470022948 20919.48675430636 20392.273642458196 20392.746125655787 20757.04214719074 21236.949486029727 20922.67673885614 20419.50111940556 21275.636318300396 0.9535110412748479 0.9379439281299267 0.9289937172418197 0.9832602156445167 0.9584800819760972 0.9585022896877973 0.9756249748138633 0.9981816368877582 0.9834101516794279 0.9597598311004016 1.0 14.376914660674702 -7.147406900832031 0.3713939350470244 0.9974200528761703 0.9318204171736374 0.4097963255968482 0.01692243460649906 0.747320306628348 0.17491226868891624 0.004751687848873316 0.018573256693499532 7.121854539465417e-08 7.147406900832031 -0.06559963570253291 AGPLT(ph)PPKPPR ddPTM_A549_PD325901_60min_R1 4 AGPLTPPKPPR 11 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 AGPLT(1)PPKPPR;AGPLT(1)PPKPPR;AGPLT(1)PPKPPR;AGPLT(1)PPKPPR 102.87 8.8123e-05 148275400.0 24459.2 23427.5 24111.3 22715.6 26473.8 26290.800000000003 25089.5 26652.6 28082.5 26873.0 29100.2 True False 26942.27997808863 25401.81764381839 25747.63781102536 24118.69102112934 24614.371617651894 26076.69644148697 26044.29465200121 26120.992984439785 26902.29018452437 25176.23419382512 25521.059881366535 1.0556881298554437 0.9953276925761534 1.0088780768005743 0.9450505242824537 0.9644729385092414 1.021771688272481 1.020502078403754 1.023507374139711 1.054121196751954 0.9864885827961565 1.0 14.639400624555044 -7.426753237362453 9.350263646807617 1.0254805765291373 0.9920949634719359 0.10316629436768543 0.030646307059895864 0.5045232259966566 45.9257133802096 0.00478025459016169 0.007643481848798725 3.7432321530523834e-08 7.426753237362453 -0.033385613057201335 AGPLT(ph)PPKPPRR ddPTM_A549_PD325901_60min_R1 1 AGPLTPPKPPRR 12 2 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 AGPLT(1)PPKPPRR 62.891000000000005 0.0025313 3504400.0 607.0 1071.7 656.89 815.3 943.08 876.77 846.94 899.75 840.89 764.9 989.12 True False 668.6221931502173 1162.0159201314775 701.470505600463 865.6592293193552 876.8413142493768 869.6298758121675 879.1707651633515 881.8037804097796 805.5503175737447 716.6040834613492 867.4645105482865 0.7707775765115858 1.3395544209607122 0.8086446155095083 0.9979188990362381 1.010809437835288 1.00249620040653 1.0134947937036247 1.0165300939544257 0.9286262524614308 0.8260903757416139 1.0 9.760660925559772 -8.734541878623267 24.8063352127863 0.9662957088630069 1.001786548173785 0.023913096810141976 0.14378643450771653 900.2626086077336 830269.9985729555 0.020753472644028922 0.023529323858216083 1.8427147890860074e-09 8.734541878623267 0.03549083931077823 AGPNAS(ph)IISLK ddPTM_A549_PD325901_60min_R1 2 AGPNASIISLK 11 0 Q9H0A0-2;Q9H0A0 Q9H0A0-2 NAT10 N-acetyltransferase 10 1 AGPNAS(1)IISLK;AGPNAS(1)IISLK 122.39 8.566e-06 6018800.0 6371.6 5772.700000000001 6280.4 6479.0 7975.2 7375.8 6184.200000000001 7022.200000000001 6831.2 7164.2 7415.3 True False 7018.4401414759905 6259.185688292413 6706.625711113197 6879.193115123395 7415.049464946377 7315.733930238698 6419.5431151240855 6882.136712190673 6544.108420137907 6711.851189349975 6503.265109459634 1.0792179041366443 0.962468172977881 1.0312705384496406 1.0578060404022185 1.140204088275667 1.1249324465639958 0.9871261600247903 1.0582586741204711 1.0062804314434086 1.032074054552525 1.0 12.666948521958133 -8.576362459342546 1.3728019295272202 1.0019759857787787 1.0579772353283992 0.11350800792319948 0.04996915054292479 0.5077984943368771 1.8600745259432017 0.009971246917478242 0.011457247716863303 2.6523909697549574e-09 8.576362459342546 0.05600124954962049 AGQAVDDFIEK ddPTM_A549_PD325901_60min_R1 2 AGQAVDDFIEK 11 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 195.51 2.2573e-23 39360000.0 22340.0 22351.5 23320.5 23895.7 26075.0 25341.0 23998.0 25519.0 26868.0 25887.0 28820.0 False True 24607.940354161234 24235.139347596083 24903.169367558654 25371.683117927783 24243.58195386661 25134.63129778178 24911.257022209484 25010.00352573179 25738.831395986846 24252.490402096944 25275.32270503239 0.9735954963400614 0.9588458921147937 0.9852760203374321 1.003812430567947 0.9591799177717182 0.9944336454615237 0.9855960025883104 0.9895028371191568 1.0183383886474442 0.9595323741313975 1.0 14.625441891538385 -8.572378999219087 4.079782268434567 1.0086299357737654 0.9804662646918625 0.0 0.01988271990802917 0.14455268955219466 5.1034725627310165 0.002389467471791395 0.0027437464011345653 2.6768312935780656e-09 8.572378999219087 -0.028163671081902875 AGQDMGLEHGFEKPLDS(ph)AMSAEEDTDVR ddPTM_A549_MK2206_60min_R1 2 AGQDMGLEHGFEKPLDSAMSAEEDTDVR 28 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 AGQDMGLEHGFEKPLDS(0.502)AMS(0.491)AEEDT(0.007)DVR;AGQDMGLEHGFEKPLDS(0.8)AMS(0.141)AEEDT(0.059)DVR 98.243 1.1375e-10 11326700.0 3579.4 4079.3 3648.7000000000003 3609.6 4662.5 3462.8999999999996 3155.6000000000004 3962.5 5628.9 6171.6 6051.5 True False 4183.51521207198 4286.9189459009385 4166.140525090716 4493.952162041104 3976.652426376402 3829.3417795130154 3728.93167325199 4524.1965096473095 4353.963137506228 4777.431273637646 4548.745537096521 0.9197074617505053 0.942439824549362 0.9158877961219123 0.9879541788810654 0.8742305749894096 0.841845679931636 0.8197714387057534 0.9946031213992944 0.9571788753620579 1.0502744624152127 1.0 12.15125301526063 -8.309578156869597 24.9994555917565 0.9803257391891603 0.902610262607627 0.47230840191795675 0.04928408281787955 315.1682965260681 163672.66788260694 0.007967368393375572 0.009632089296229447 4.902547872073446e-09 8.309578156869597 -0.07771547658153333 AGQDMGLEHGFEKPLDSAMS(ph)AEEDTDVR ddPTM_A549_MK2206_60min_R1 3 AGQDMGLEHGFEKPLDSAMSAEEDTDVR 28 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 AGQDMGLEHGFEKPLDS(0.085)AMS(0.744)AEEDT(0.17)DVR;AGQDMGLEHGFEKPLDSAMS(0.999)AEEDT(0.001)DVR;AGQDMGLEHGFEKPLDS(0.023)AMS(0.977)AEEDTDVR 163.48 2.5986000000000002e-46 13623900.0 3730.6000000000004 4290.67 3936.3999999999996 3357.55 5423.1 3614.8 3650.5999999999995 3582.7999999999997 6343.299999999999 5730.1 6255.0 True False 4360.234075586896 4509.046776066673 4494.640711203192 4180.149900726147 4625.36917393713 3997.315736689959 4313.866765868207 4090.672871864824 4906.552678168603 4435.666430272718 4701.7108707822445 0.9273718004828028 0.9590225558290196 0.9559585509892059 0.8890699610439204 0.9837629962915152 0.8501832304343521 0.9175100052782467 0.8700392228040685 1.0435675040460917 0.9434153975390529 1.0 12.198970108613928 -8.771214434210293 24.999913312195677 1.0205735488980143 0.9204754075272127 0.32961986646770336 0.04490707379573652 100.86724084263237 257969.44916468483 0.006692461855624544 0.007167376885934256 1.6935014225471992e-09 8.771214434210293 -0.10009814137080164 AGQDMGLEHGFEKPLDSAMS(ph)AEEDTDVR ddPTM_A549_PD325901_60min_R1 2 AGQDMGLEHGFEKPLDSAMSAEEDTDVR 28 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 AGQDMGLEHGFEKPLDS(0.055)AMS(0.941)AEEDT(0.004)DVR;AGQDMGLEHGFEKPLDS(0.016)AMS(0.983)AEEDT(0.001)DVR 124.82 2.3236e-21 16363600.0 4021.0 4020.6 4322.799999999999 4918.0 5491.6 5609.6 4772.5 5324.5 4787.0 4860.0 5359.4 True False 4429.208959896252 4359.430072296928 4616.1712031081015 5221.773690411612 5105.8889609915195 5563.91727745695 4954.120099112205 5218.298670510557 4585.819037240919 4553.138770587213 4700.227776035761 0.9423392165117389 0.9274933641564354 0.9821164894696754 1.110961838282597 1.0863067077353215 1.1837548183993833 1.0540170253813912 1.1102225081763473 0.9756588947926825 0.9687059835273334 1.0 12.198514957068264 -6.004097834082367 9.171575451821726 1.0297451511974391 0.939668157411059 0.2948955475105528 0.06624476422420515 0.14147574837997484 168.90499159694235 0.01079427542713962 0.031485894861982715 9.906087640318759e-07 6.004097834082367 -0.09007699378638012 AGQDMGLEHGFEKPLDSAMSAEEDT(ph)DVR ddPTM_A549_PD325901_60min_R1 1 AGQDMGLEHGFEKPLDSAMSAEEDTDVR 28 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 AGQDMGLEHGFEKPLDS(0.041)AMS(0.288)AEEDT(0.67)DVR 80.52 4.0521e-06 6915300.0 1296.8 1636.4 1663.1 1155.9 2148.6 2069.2 1911.9 1889.1 1992.2 2375.7 1935.7 True False 1428.4501813462966 1774.3051709462989 1775.9679670327307 1227.2973177606307 1997.689748267605 2052.3491212410736 1984.6584007318231 1851.4204185297199 1908.474762062118 2225.6978965605 1697.6211714132958 0.8414422518995153 1.045171443914759 1.0461509298651184 0.722951232246289 1.1767582673374046 1.2089558941659884 1.1690820273403897 1.0905969186213575 1.1242053257814189 1.3110686494959132 1.0 10.729298838312104 -6.797871701556698 24.99996249560348 1.0892405675758972 0.9327469894048154 0.4134887902302522 0.12233058575337957 155.15727089082617 106468.9378640936 0.015880450829942307 0.030011886475617942 1.5926791637853922e-07 6.797871701556698 -0.15649357817108178 AGQEPS(ph)PKPGTDVIPAAPR ddPTM_A549_MK2206_60min_R1 2 AGQEPSPKPGTDVIPAAPR 19 1 Q4VC44-2;Q4VC44;I3L0R3;I3L231;Q4VC44-3 Q4VC44-2 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 1 AGQEPS(0.996)PKPGT(0.004)DVIPAAPR;AGQEPS(0.978)PKPGT(0.022)DVIPAAPR 88.22200000000001 1.7637e-06 29834000.0 7066.9 7745.7 6162.1 6374.1 9393.400000000001 7302.4 6002.9 6646.900000000001 9983.4 9802.599999999999 9952.099999999999 True False 8259.619950883245 8139.923045440373 7035.9784388032695 7935.754786144221 8011.6433033617395 8075.1351210591865 7093.549227203816 7589.118430277523 7722.175840213845 7588.185851798626 7480.718906013103 1.104121148602984 1.0881204263533273 0.9405484322031743 1.0608278276256782 1.0709723763209271 1.0794597715158476 0.9482443220132126 1.0144905223182876 1.0322772366178143 1.0143658580325936 1.0 12.868961206152287 -7.715493540836847 24.99999563669323 1.010992604087763 1.054209942337831 0.2641011378014553 0.04477944506609606 172.03293191842735 93605.9420448008 0.006911089639715732 0.010250778010618923 1.9253356799448547e-08 7.715493540836847 0.043217338250068016 AGQEPS(ph)PKPGTDVIPAAPR ddPTM_A549_PD325901_60min_R1 2 AGQEPSPKPGTDVIPAAPR 19 1 Q4VC44-2;Q4VC44;I3L0R3;I3L231;Q4VC44-3 Q4VC44-2 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 1 AGQEPS(0.998)PKPGT(0.002)DVIPAAPR;AGQEPS(0.991)PKPGT(0.009)DVIPAAPR 87.419 1.8813999999999999e-06 35548000.0 8858.8 10500.0 9014.2 10284.7 11455.0 10940.7 9453.2 12276.400000000001 10603.599999999999 10467.5 11412.1 True False 9758.138854496126 11384.8718497532 9625.957818788078 10919.962560751592 10650.440317604669 10851.602566577525 9812.946698989526 12031.537571350507 10157.967567012287 9806.580263605274 10008.484047262322 0.9749867021235176 1.137522105844528 0.9617798033480527 1.091070586632807 1.0641412093290936 1.0842403819932975 0.9804628405911001 1.202133861085742 1.0149356804730936 0.9798267367262002 1.0 13.288935849914987 -8.969487375865478 24.998839523770574 1.0065891483382672 1.0632905747070893 0.14436319471776538 0.06857060937203774 256.2038742040579 209908.22608435721 0.010626867849541454 0.011198003749459848 1.07278483124622e-09 8.969487375865478 0.05670142636882214 AGQTQPNPGILPIQPALT(ph)PR ddPTM_A549_MK2206_60min_R1 5 AGQTQPNPGILPIQPALTPR 20 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR 218.38 6.146e-67 23249400.0 3579.8900000000003 3197.8900000000003 4370.78 3620.2000000000003 5021.6 4215.07 3703.77 3580.9 6108.119999999999 5978.77 5709.35 True False 4184.087912092633 3360.64894170744 4990.622326926298 4507.149162516955 4282.929292073298 4661.1059096629815 4376.697066624579 4088.503541046321 4724.640572663315 4628.1617045639005 4291.560824956133 0.974957150266046 0.7830831435883917 1.162892134233542 1.0502354146554653 0.9979887194345141 1.0861097162034576 1.019838060123339 0.9526845145176551 1.1009142746361071 1.0784332072495344 1.0 12.067286730729464 -5.756947030927038 24.9999999386096 1.045542650438929 0.8790201686771009 0.479830157366245 0.0684989577841693 67.978228961482 378285.37959303823 0.009010837688340743 0.03265242505824483 1.7500601230876362e-06 5.756947030927038 -0.16652248176182805 AGQTQPNPGILPIQPALT(ph)PR ddPTM_A549_PD325901_60min_R1 4 AGQTQPNPGILPIQPALTPR 20 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR 193.04 1.5247999999999998e-44 45296700.0 6496.8 5187.19 5610.160000000001 5696.45 5730.19 5852.160000000001 5559.57 5719.280000000001 6857.5199999999995 5992.14 6763.67 True False 7156.350353308624 5624.332705744886 5990.899194232666 6048.306778923393 5327.72122248233 5804.501949237467 5771.142478663434 5605.204473711639 6569.322282068172 5613.795257774989 5931.781468436722 1.2064420092661687 0.9481692364548854 1.0099662683311095 1.019644235227934 0.8981654585273202 0.978542783499946 0.972918929898538 0.9449445337015846 1.1074788100377322 0.9463927974498467 1.0 12.534249733396972 -8.755733150337324 24.999261224160797 1.0507538821602371 0.9921262476873732 0.0 0.08379198791007351 243.0979407392112 1065021.5139259845 0.013345517338337914 0.01493233058028274 1.7549584944390646e-09 8.755733150337324 -0.0586276344728639 AGRPSKPPS(ph)PK ddPTM_A549_MK2206_60min_R1 3 AGRPSKPPSPK 11 2 Q9P2M4;B9A071;Q9P2M4-2 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 AGRPS(0.001)KPPS(0.999)PK;AGRPS(0.047)KPPS(0.953)PK;AGRPS(0.001)KPPS(0.999)PK 66.215 0.0010821 83843000.0 11848.199999999999 14431.199999999999 12815.2 11539.5 17184.9 13715.400000000001 11233.1 12322.699999999999 17752.8 18498.0 18029.4 True False 13847.886499321467 15165.686439361067 14632.588060718212 14366.67801802784 14657.023974699374 15166.754524454316 13274.008866398442 14069.480461686016 13731.819145396194 14319.288952581044 13552.202393873931 1.021818158912768 1.1190569620046766 1.0797203019438857 1.0600991337409542 1.0815233973575291 1.1191357746627382 0.9794724488765574 1.038169299186818 1.0132536945879331 1.0566023540980958 1.0 13.726239705263268 -7.76618998315474 24.999987986996615 1.0074922956688543 1.0811118635561268 0.4801105059415923 0.031726615252506016 54.37113090743932 286127.3173863343 0.004021777136289333 0.005654278479604372 1.7132076967764506e-08 7.76618998315474 0.07361956788727242 AGRPVMPPPQVPLPTSSIS(ph)PAK ddPTM_A549_PD325901_60min_R1 3 AGRPVMPPPQVPLPTSSISPAK 22 1 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 AGRPVMPPPQVPLPT(0.019)S(0.045)S(0.116)IS(0.82)PAK;AGRPVMPPPQVPLPT(0.003)S(0.021)S(0.14)IS(0.837)PAK;AGRPVMPPPQVPLPT(0.02)S(0.017)S(0.125)IS(0.838)PAK 70.79899999999999 0.00010812 10917300.0 5773.7 6841.9 6074.799999999999 7183.700000000001 8486.7 7488.0 7868.9 7991.5 8390.9 7321.700000000001 7909.0 True False 6359.841773626708 7418.490924650136 6487.072458739965 7627.42083363357 7890.623469525585 7427.020210638489 8168.3552955273 7832.103263289527 8038.259653140765 6859.406612470864 6936.24313928179 0.9169000633223529 1.0695257902130404 0.9352429447004169 1.0996472702113709 1.137593263540444 1.0707554596201072 1.17763393403379 1.129156389996516 1.1588780110111716 0.9889224576953222 1.0 12.75993875555287 -6.2759617828723995 23.966010144014945 1.0932018291685475 0.9834532199102997 0.39416541181788267 0.0667244452319702 404.0724354047341 666832.2490484447 0.010275573907270826 0.023985580618308792 5.297100553659669e-07 6.2759617828723995 -0.10974860925824781 AGS(ph)DFR ddPTM_A549_MK2206_60min_R1 1 AGSDFR 6 0 F5GZ18;Q96PZ7-4;Q96PZ7-3;Q96PZ7-2;Q96PZ7 F5GZ18 CSMD1 CUB and sushi domain-containing protein 1 1 AGS(1)DFR 64.803 0.05814400000000001 27162000.0 2676.8 3687.4 3015.9 3077.1 3660.5 3183.6 2833.2 3177.2 4012.7 5490.9 5007.2 True False 3128.578398523294 3875.0729098411807 3443.5999697484262 3830.9896381362696 3122.0452990350273 3520.4864388973547 3347.955766465182 3627.5778297669212 3103.829856965171 4250.50187640433 3763.7740483102866 0.8312343829268501 1.029571079480943 0.9149327046596754 1.0178585613703774 0.8294985987367234 0.9353607293397026 0.8895209232786483 0.9638139227288339 0.8246589240282923 1.1293190881935529 1.0 11.877964305617262 -6.744264058985162 24.99983032921581 0.913214191791112 0.9518066641767088 0.0 0.09486983925360312 670.2675053997943 975614.4174951479 0.011101639697353425 0.023065001564695247 1.8019218063166065e-07 6.744264058985162 0.03859247238559682 AGS(ph)DLK ddPTM_A549_PD325901_60min_R1 1 AGSDLK 6 0 P78346;P78346-2;Q5VU11 P78346 RPP30 Ribonuclease P protein subunit p30 1 AGS(1)DLK 63.565 0.059756 16670000.0 4630.0 5128.8 3833.8 4824.4 5096.1 5231.1 4353.6 4095.9 5223.4 5597.5 5651.3 True False 5100.034191574149 5561.021975525167 4093.984722512227 5122.392230992637 4738.16751659059 5188.499655965677 4519.278630381334 4014.2040613286094 5003.8786628627995 5244.0728947246735 4956.225926542315 1.0290156799071024 1.1220275382814893 0.8260286724597266 1.0335267816506193 0.9560031335972908 1.0468650406309075 0.9118387049668223 0.8099316134543321 1.0096147223768164 1.0580778544902154 1.0 12.275026238014922 -4.092214248749796 15.80378059358261 0.9865477279688861 0.9887723490261715 0.0 0.09308215039354686 0.0 0.0 0.011237024223523925 0.0 8.086968495919074e-05 4.092214248749796 0.002224621057285381 AGS(ph)EECVFYTDETASPLAPDLAK ddPTM_A549_PD325901_60min_R1 1 AGSEECVFYTDETASPLAPDLAK 23 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 AGS(0.996)EECVFY(0.003)T(0.001)DETASPLAPDLAK 68.657 0.00013302 1758300.0 695.24 594.2 836.62 863.15 817.3 839.22 810.8 575.57 700.93 777.17 1049.6 True False 765.8202529913631 644.275319345081 893.3980642047526 916.46481514412 759.895667531934 832.3856705625041 841.6554376867841 564.08980482407 671.4723496497337 728.0993535673384 920.5058539625957 0.8319558747993382 0.699914418329447 0.970551203296373 0.9956099803156279 0.8255196468992928 0.9042698283549728 0.9143401251210125 0.6128041471933883 0.7294601623218125 0.7909774288050583 1.0 9.846283086206997 -11.021692931236238 1.3611265781575532 0.9984014201080721 0.8228783148543716 0.0 0.126029388806806 0.5151772558589208 1.7251279855121853 0.08081470832795232 0.018978110289465406 9.512771583072448e-12 11.021692931236238 -0.17552310525370052 AGS(ph)EVISR ddPTM_A549_PD325901_60min_R1 1 AGSEVISR 8 0 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 AGS(1)EVISR 54.982 0.021818 941860.0 254.64 493.06 466.16 245.66 386.7 412.75 603.64 361.66 341.03 426.63 378.98 True False 280.49086534393973 534.6118965942208 497.79642084780085 260.8338602656602 359.53952604257756 409.3887008468264 626.6118505244826 354.44640758321856 326.69769506377054 399.69250899086876 332.3678625521575 0.8439169274373606 1.608494553261225 1.4977272983776617 0.784774611669106 1.081751777328219 1.2317337112657283 1.8852961466036757 1.066428038082642 0.9829400849864143 1.2025606384496523 1.0 8.376637080974119 -8.503722516507544 24.85060507011846 0.9936670519211016 1.2841889569463212 0.08861503475215338 0.3079080166386692 952.8494493892317 1236095.1735941747 0.0488036054889956 0.05852760340771172 3.1352883122250393e-09 8.503722516507544 0.2905219050252196 AGS(ph)FTGTSDPEAAPAR ddPTM_A549_PD325901_60min_R1 2 AGSFTGTSDPEAAPAR 16 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 AGS(0.5)FT(0.5)GT(0.001)SDPEAAPAR;AGS(0.872)FT(0.128)GTSDPEAAPAR 263.72 3.177899999999999e-91 47397000.0 12896.5 12751.2 13541.7 13627.099999999999 15111.4 13872.2 14505.9 14448.4 16042.2 15398.5 16022.3 True False 14205.743186098489 13825.788374340294 14460.72119485728 14468.815017610435 14050.027395499885 13759.229402513247 15057.929962433054 14160.215327449467 15368.002122253238 14426.23608207555 14051.65867372798 1.010965574666185 0.983925719757911 1.0291113334466424 1.0296873382401752 0.9998839084932268 0.9791889855849203 1.0716122780997004 1.0077255401829859 1.0936788658969059 1.026657166747717 1.0 13.778452817406496 -7.760986612808534 24.999998825129133 1.0439081487437574 1.0064044054700476 0.25659764653754547 0.02883549215473544 15.696960544729697 866645.4572401987 0.005777204925238537 0.008283426461524367 1.7338574433418478e-08 7.760986612808534 -0.037503743273709755 AGS(ph)ISTLDSLDFAR ddPTM_A549_MK2206_60min_R1 2 AGSISTLDSLDFAR 14 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGS(0.991)IS(0.003)T(0.003)LDS(0.004)LDFAR;AGS(0.997)IS(0.001)T(0.001)LDSLDFAR 77.91199999999999 0.00068752 9738800.0 1298.11 1437.8 1505.58 1297.3600000000001 1824.96 1482.19 1236.1999999999998 1227.8000000000002 2286.3 1981.0900000000001 2116.21 True False 1517.1992322575745 1510.9778786596644 1719.0938832367901 1615.2132582407041 1556.5108015098929 1639.0343620019066 1460.801538368015 1401.8444099798028 1768.4567004708713 1533.5603930732404 1590.696652575234 0.9537954516980519 0.9498843643214373 1.0807176091391715 1.015412495918552 0.9785088809924906 1.0303877608269414 0.9183407383193223 0.8812770226870774 1.1117498094987848 0.9640809833795188 1.0 10.635443023189811 -8.782669441951901 24.99992878706136 1.0527707306104022 0.9799407873128986 0.06289295145612783 0.06267261134772913 276.1092484366144 325137.1353572239 0.011369447850077352 0.012109415390947512 1.6494173481447981e-09 8.782669441951901 -0.07282994329750359 AGS(ph)ISTLDSLDFAR ddPTM_A549_PD325901_60min_R1 1 AGSISTLDSLDFAR 14 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGS(0.993)IS(0.006)T(0.001)LDSLDFAR 90.229 6.9668e-05 8204900.0 1352.6 1389.1 1550.2 1390.4 1764.5 1580.9 1261.5 1707.9 1659.1 1796.3 1851.5 True False 1489.9149562685072 1506.1643320468731 1655.4058941098788 1476.2818501724914 1640.5676071945384 1568.0256745457255 1309.5070728192868 1673.8345946783684 1589.3737966756642 1682.8813114415243 1623.777237625519 0.9175611788026039 0.9275683247348426 1.0194784455351837 0.9091652573793232 1.01034031588814 0.9656655101525378 0.8064573406227842 1.030827724328769 0.9788127089401969 1.0363991269531738 1.0 10.665138010647905 AGS(ph)IVLK ddPTM_A549_MK2206_60min_R1 1 AGSIVLK 7 0 O15511-2;O15511;B1ALC0 O15511-2 ARPC5 Actin-related protein 2/3 complex subunit 5 1 AGS(1)IVLK 72.547 0.01968 1503200.0 815.59 1273.2 1323.0 994.54 1652.0 1167.5 1376.4 1294.9 1839.6 1821.7 1859.0 True False 953.2416527389473 1338.0004417231075 1510.6212938019066 1238.2023446465973 1408.992988391168 1291.0440750762223 1626.47406358982 1478.4560404649333 1422.933537237553 1410.1767047744036 1397.3589942101025 0.6821737697246474 0.9575208999742052 1.0810545465131736 0.8861018176267058 1.0083257017196514 0.9239172470536264 1.163962926011888 1.0580359425107313 1.0183020563315637 1.0091728114374408 1.0 10.448486994480227 -5.28005096593956 3.5141143492647995 1.0124689364417734 0.6488283547906816 0.6511696767401398 0.07007002413678722 0.11757111809723299 2.541855977989091 0.009002365246666382 0.10979117703931164 5.247458759169487e-06 5.28005096593956 -0.3636405816510918 AGS(ph)IVLK ddPTM_A549_PD325901_60min_R1 2 AGSIVLK 7 0 O15511-2;O15511;B1ALC0 O15511-2 ARPC5 Actin-related protein 2/3 complex subunit 5 1 AGS(1)IVLK;AGS(1)IVLK 92.439 0.012276 6153400.0 2672.9 2683.0 2709.2 2825.8 3370.6 2802.4 2778.1 2714.2 3151.5 2935.4 3183.3 True False 2944.2508403150186 2909.10582598932 2893.0626037430557 3000.3432481425675 3133.8606839387444 2779.57818353276 2883.8221157346497 2660.063151751292 3019.053414636464 2750.0583430415013 2791.7742806013043 1.0546163637845654 1.0420275901971359 1.0362809858395627 1.07470839207543 1.1225336896734217 0.9956314172125987 1.0329710878751701 0.9528217127848733 1.0814102829209413 0.9850575535960528 1.0 11.446966586732144 -7.294618423597591 24.99181351528431 1.0290718897359463 1.0635288290662224 0.2721396268011259 0.0397263864616287 1035.0548145920043 779643.8953641814 0.0065206384614872985 0.01042407346271748 5.0743635220926337e-08 7.294618423597591 0.03445693933027605 AGS(ph)KGGNLR ddPTM_A549_PD325901_60min_R1 2 AGSKGGNLR 9 1 Q96AG4;I3L223 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 1 AGS(1)KGGNLR;AGS(1)KGGNLR 63.091 0.0019195 27491000.0 9318.8 8692.099999999999 9568.3 9784.9 12095.2 9993.099999999999 9268.5 9896.7 10482.7 10254.1 12209.7 True False 10264.837715862017 9424.613771927596 10217.662376862052 10389.291049879754 11245.674878174783 9911.719506801743 9621.217839417814 9699.302554689042 10042.148573571203 9606.654376024342 10707.984303665304 0.9586153121599553 0.880148261769639 0.9542096894337605 0.9702377922167422 1.0502139860557538 0.9256382177744692 0.8985087731333811 0.9058009686630757 0.9378187611027607 0.8971487166577204 1.0 13.386399308862964 -10.596244469210172 0.987838366558776 0.9984814307879086 0.9424382380840202 0.0 0.05235131044954356 0.7207882948904973 1.3030370752929674 0.02655771888040398 0.008114329149098575 2.5337019798786544e-11 10.596244469210172 -0.05604319270388847 AGS(ph)PAPSNR ddPTM_A549_MK2206_60min_R1 2 AGSPAPSNR 9 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 AGS(0.998)PAPS(0.002)NR;AGS(0.839)PAPS(0.161)NR 71.34899999999999 0.0031435 113845000.0 1024.29 1124.19 726.3199999999999 673.05 889.46 852.95 653.2 834.0999999999999 964.28 1360.12 1494.09 True False 1197.1651105138326 1181.4064691962783 829.3230975919877 837.947280214363 758.6216122605371 943.2086028576136 771.8779848422489 952.3362293241186 745.8721196387402 1052.867947355635 1123.0662182137553 1.0659790946413936 1.051947293967504 0.7384454132286447 0.7461245531426669 0.6754914358185665 0.8398512817505931 0.6872951677505946 0.8479786978534677 0.664139039659705 0.9374940945425541 1.0 10.133227279072148 -5.750686737387827 24.516325057825135 0.8059467268765919 1.0589634398941687 0.4933872213981694 0.10327252844872487 138.1965529249024 315083.5764130361 0.018061822493172047 0.06849365890877956 1.775469689944507e-06 5.750686737387827 0.2530167130175769 AGS(ph)PAPSNR ddPTM_A549_PD325901_60min_R1 1 AGSPAPSNR 9 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 AGS(0.975)PAPS(0.025)NR 60.518 0.0080494 66467000.0 689.68 540.91 540.25 430.02 598.57 629.35 348.77 462.87 485.84 632.96 810.0 True False 759.6958058844186 586.49438402381 576.9146137871645 456.58135875372153 556.5285081543981 624.2247822603274 362.0426332042672 453.6376947355095 465.4218343541107 592.9947975783708 710.3751350130549 1.0694290501460997 0.8256122084186289 0.8121266994748659 0.6427327425323393 0.7834290373130396 0.8787255514635316 0.509649923483898 0.6385889262962066 0.6551775412938087 0.8347628856230632 1.0 9.472437274248263 -2.0000054730034167 13.51476260052327 0.7994844594332293 0.7900756989641153 0.0 0.15868423830504255 0.0 0.0 0.023824457880282434 0.0 0.009999873980233245 2.0000054730034167 -0.009408760469113986 AGS(ph)PDVLR ddPTM_A549_MK2206_60min_R1 3 AGSPDVLR 8 0 Q8NDX6 Q8NDX6 ZNF740 Zinc finger protein 740 1 AGS(1)PDVLR;AGS(1)PDVLR;AGS(1)PDVLR 129.63 0.0010683 291616400.0 6366.370000000001 6172.16 6515.22 5365.58 7815.5 5730.12 5207.91 5490.379999999999 8372.26 9470.9 8531.95 True False 7440.85761319738 6486.296580573122 7439.176164628911 6680.147340870041 6665.85030313025 6336.477495054186 6154.119834721057 6268.658178583569 6475.956477751938 7331.417112174282 6413.231345159167 1.1602353342225655 1.011392889400303 1.1599731499229553 1.041619580106423 1.0393902768160335 0.9880319536324046 0.9595973548289829 0.9774570479693165 1.0097805816158678 1.143170535662678 1.0 12.646835735264256 -6.702022769467022 1.9640229732960193 0.998258375145586 1.100523473130177 0.28390528130395964 0.06020177047118123 0.17576978113678896 1.3751100421848401 0.00556939331022502 0.013427166479045587 1.9859907918408012e-07 6.702022769467022 0.10226509798459094 AGS(ph)PDVLR ddPTM_A549_PD325901_60min_R1 2 AGSPDVLR 8 0 Q8NDX6 Q8NDX6 ZNF740 Zinc finger protein 740 1 AGS(1)PDVLR;AGS(1)PDVLR 118.21 0.0012478 374930000.0 10864.5 10888.5 11105.5 10631.8 11291.8 11543.5 11246.3 11630.5 11903.3 12074.7 11945.3 True False 11967.45604197782 11806.112108194071 11859.186012796587 11288.502139430291 10498.70292259524 11449.493563235224 11674.284100711495 11398.520553549257 11403.04569584078 11312.301381318806 10476.1038274956 1.1423575251867983 1.1269563859426182 1.1320225732844442 1.0775477529921447 1.0021572041926814 1.0929152432782179 1.1143726993303702 1.0880495975643807 1.08848154653759 1.0798195175985674 1.0 13.354814642810956 -14.99999999999966 0.1584190148019609 0.6368304377861694 1.1234615721849912 0.15219570756180711 0.04152255280343493 36.20795267978689 0.3711807972046313 4.095136826242326 0.06092865623221632 1.0000000000007812e-15 14.99999999999966 0.4866311343988218 AGS(ph)PFSPPPSSSSLTGEAAISR ddPTM_A549_MK2206_60min_R1 1 AGSPFSPPPSSSSLTGEAAISR 22 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9J760;C9J0X3;C9K0F0;Q96JY6-2;A0A087WXJ0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 AGS(0.718)PFS(0.251)PPPS(0.007)S(0.007)S(0.007)S(0.007)LT(0.002)GEAAIS(0.001)R 48.656000000000006 0.012605 2411700.0 1039.9 1052.2 718.56 954.26 1394.3 1113.7 778.82 1126.1 1348.2 1356.9 1556.1 True False 1215.409696885973 1105.7524856904286 820.4626129057431 1188.05374283836 1189.2003170180415 1231.550994785771 920.3215127906308 1285.7281235366145 1042.8348526330005 1050.375347592022 1169.6774238248202 1.039098192484223 0.945348232912491 0.7014434887721847 1.015710587072331 1.0166908352641209 1.0528979782807346 0.7868165137198246 1.099215986688288 0.8915576477683504 0.898004292634218 1.0 10.191894999757977 -7.472145089879946 0.005108604674537725 1.885902682707264 1.2708981473509725e-07 0.0 0.11602537545773008 38297.93069636731 75.50677246380783 13749.035188317823 14123.238885410326 3.371746459297908e-08 7.472145089879946 -1.8859025556174493 AGS(ph)PLCNSNLQDSEEDIEPSYSLFR ddPTM_A549_PD325901_60min_R1 2 AGSPLCNSNLQDSEEDIEPSYSLFR 25 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AGS(1)PLCNSNLQDSEEDIEPSYSLFR;AGS(0.995)PLCNS(0.005)NLQDSEEDIEPSYSLFR 125.59 3.5621e-18 7673600.0 659.94 931.04 906.21 774.5 897.46 1082.81 945.8399999999999 920.1700000000001 791.75 1167.42 1064.23 True False 726.9366229778499 1009.5020082851647 967.7108600834176 822.3391059828783 834.4255056689216 1073.9919543645115 981.8344587835069 901.8164874905992 758.4755008847916 1093.7089019668558 933.3364567098064 0.7788580610473994 1.081605675025121 1.0368295946509876 0.881074665058927 0.8940243356725127 1.1507018145959318 1.051961971189538 0.9662287174227382 0.8126496028651512 1.1718270449033927 1.0 9.866253439045682 -8.538863189633918 24.569206222426953 0.9103663526371694 0.9888426962441279 0.0 0.13202361851591743 375.77675010919586 577592.1891611243 0.01944522993252158 0.0220521339031034 2.8915906405876604e-09 8.538863189633918 0.07847634360695854 AGS(ph)PSRDVGPSLGLK ddPTM_A549_MK2206_60min_R1 4 AGSPSRDVGPSLGLK 15 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AGS(0.5)PS(0.5)RDVGPSLGLK;AGS(0.968)PS(0.032)RDVGPSLGLK;AGS(0.817)PS(0.183)RDVGPSLGLK;AGS(0.573)PS(0.427)RDVGPSLGLK 132.84 1.6996e-09 255421000.0 7452.299999999999 9416.4 8852.7 8197.1 11888.6 8467.8 8880.3 8818.3 12829.400000000001 12270.7 12856.6 True False 8710.066048757897 9895.654539303698 10108.14597705226 10205.389867981808 10139.802688733185 9363.856975529281 10493.735561534928 10068.321029911134 9923.561384341952 9498.740347628733 9663.951395891121 0.901294480067564 1.02397602532553 1.0459640744209453 1.0560266137432037 1.0492398267901455 0.9689470271457042 1.0858638595799035 1.0418430947605906 1.0268637514631138 0.9829043999194127 1.0 13.238397483418293 -5.261469380365456 11.099003569199365 1.0241769197101118 0.9011405395866198 0.5555278087128864 0.03244591495639437 0.03648888649474178 257.66458632887964 0.004218265613026243 0.033619244479951856 5.476847137357538e-06 5.261469380365456 -0.12303638012349205 AGS(ph)PSRDVGPSLGLK ddPTM_A549_PD325901_60min_R1 7 AGSPSRDVGPSLGLK 15 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AGS(0.817)PS(0.183)RDVGPSLGLK;AGS(0.701)PS(0.297)RDVGPS(0.002)LGLK;AGS(0.897)PS(0.103)RDVGPSLGLK;AGS(0.971)PS(0.029)RDVGPSLGLK;AGS(0.831)PS(0.169)RDVGPSLGLK;AGS(0.83)PS(0.17)RDVGPSLGLK;AGS(0.967)PS(0.033)RDVGPSLGLK 140.32 1.7826e-11 475553600.0 26742.6 25438.0 26545.7 27373.699999999997 31388.4 30317.699999999997 29225.899999999998 31798.899999999998 29742.7 31112.600000000002 30632.500000000004 True False 29457.489065138387 27581.749534668765 28347.250834261788 29064.511278816663 29183.787068101487 30070.80270300141 30338.107617526108 31164.645993745547 28492.717752025364 29148.14512629048 26864.896695416548 1.0965048330211582 1.026683625378486 1.055178106793098 1.08187690458439 1.086316742587012 1.1193343880652935 1.129284358003957 1.1600508405849401 1.0605928649219984 1.0849900320392254 1.0 14.713434669956408 -9.68988007217371 1.1898637932960783 1.0120940183406673 1.0909649702871191 0.09445469548957408 0.04150021178288488 0.2874127873385579 0.8318167882518821 0.010983519875386597 0.007587387972656364 2.0423018362577352e-10 9.68988007217371 0.07887095194645188 AGS(ph)PSRDVGPSLGLKK ddPTM_A549_MK2206_60min_R1 4 AGSPSRDVGPSLGLKK 16 2 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AGS(0.809)PS(0.188)RDVGPS(0.003)LGLKK;AGS(0.852)PS(0.148)RDVGPSLGLKK;AGS(0.5)PS(0.5)RDVGPSLGLKK;AGS(0.985)PS(0.015)RDVGPSLGLKK 63.998000000000005 0.00065869 25494800.0 9249.4 12438.8 13257.9 11708.100000000002 16758.1 10999.199999999999 11201.2 9805.8 19939.5 18159.6 19935.6 True False 10810.472593881263 13071.881789589534 15138.069577548209 14576.585025596585 14293.005689320838 12163.12804332195 13236.31304931873 11195.802179003049 15423.235086838538 14057.333747610062 14985.040325430287 0.721417651144749 0.8723287696067099 1.0102121348221016 0.9727424624183003 0.9538183000458774 0.8116847054912876 0.8833017971166958 0.7471319353077261 1.0292421476280325 0.9380911523977773 1.0 13.871235345764635 -8.810494053127838 24.999731588309928 1.0138088945502786 0.8807330709854438 0.2457889011997828 0.0878064532015242 93.64477519949794 47723.74162823458 0.01504172585275114 0.016013150140469688 1.5470556879136324e-09 8.810494053127838 -0.13307582356483472 AGS(ph)PSRDVGPSLGLKK ddPTM_A549_PD325901_60min_R1 3 AGSPSRDVGPSLGLKK 16 2 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AGS(0.873)PS(0.127)RDVGPSLGLKK;AGS(0.779)PS(0.214)RDVGPS(0.007)LGLKK;AGS(0.837)PS(0.163)RDVGPSLGLKK 74.51899999999999 0.00011146 37903000.0 9083.2 8744.5 10314.0 10958.3 11932.1 14083.0 12750.1 12632.5 12460.900000000001 12438.400000000001 11977.1 True False 10005.319777301578 9481.429703825423 11013.970063120432 11635.169302895 11094.030459510323 13968.312717203762 13235.312032622433 12380.534877495467 11937.211706947011 11653.037301249382 10503.992629092418 0.9525253996837652 0.9026500720845091 1.048550817963786 1.1076901625644342 1.0561727193889783 1.329809836168047 1.2600267821937734 1.1786503774960464 1.1364451717040502 1.1093912298619202 1.0 13.358650188518977 -5.923577306040128 3.3078508113699923 1.1081714402610792 0.9271072785498777 0.41677088203416557 0.09248314591698809 0.23742221131017216 5.16868921760415 0.015754346231533267 0.05635417394467906 1.192401994954439e-06 5.923577306040128 -0.18106416171120143 AGS(ph)QVVATTAR ddPTM_A549_MK2206_60min_R1 2 AGSQVVATTAR 11 0 Q9BWH2 Q9BWH2 FUNDC2 FUN14 domain-containing protein 2 1 AGS(1)QVVATTAR;AGS(1)QVVATTAR 72.321 0.0020454 8885700.0 2733.3 3616.7 3105.3 3206.8 3941.2000000000003 2853.0 2618.7 3004.4 4825.0 4024.1000000000004 5306.200000000001 True False 3194.614217230918 3800.7745818252947 3545.678234046154 3992.4661439587226 3361.4547008760696 3154.902566331872 3094.483892998158 3430.2829005891163 3732.145203941722 3115.0530151411717 3988.5240963300953 0.8009514647712254 0.9529275717106607 0.8889699920099742 1.0009883474521952 0.8427815953196818 0.7909949871519514 0.775846859204246 0.8600381538989258 0.9357208616028491 0.7810039352670282 1.0 11.961639278524899 -9.114579500950617 1.7522390786794149 0.9785202492049138 0.8671300204900755 0.0 0.0881674927760312 0.27469757536788986 1.7324852951466965 0.014351421822128695 0.013594750314425608 7.681048353014332e-10 9.114579500950617 -0.11139022871483828 AGS(ph)RPQS(ph)PSGDADAR ddPTM_A549_PD325901_60min_R1 2 AGSRPQSPSGDADAR 15 1 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 2 AGS(0.954)RPQS(0.876)PS(0.17)GDADAR;AGS(0.999)RPQS(0.567)PS(0.435)GDADAR 55.656000000000006 0.043132 16476200.0 569.9300000000001 712.13 542.88 442.95000000000005 888.76 481.37 396.25 766.22 747.28 598.7 561.5799999999999 True False 627.7888740397095 772.1436943204521 579.7231014026391 470.31001548756063 826.3365636555507 477.44988231771464 411.3295105863199 750.9371410120385 715.8744203362008 560.8979798252188 492.50922014892745 1.274674358075724 1.5677751049756334 1.1770807077019583 0.9549263165983896 1.6778093279262443 0.9694232367331944 0.83517118819002 1.524716919583691 1.45352491090366 1.1388578261653897 1.0 8.944006922950079 -11.055801464605711 1.3926777710786826 1.001498384538518 1.287679737875486 0.070310418120475 0.26273129985252963 0.6916689780200563 2.41340302674807 0.18178963477588866 0.04135573000314004 8.794244491258937e-12 11.055801464605711 0.28618135333696815 AGS(ph)SPAQGAQNEPPR ddPTM_A549_MK2206_60min_R1 1 AGSSPAQGAQNEPPR 15 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AGS(0.5)S(0.5)PAQGAQNEPPR 166.52 1.5405e-20 6864000.0 2145.3 2101.1 2303.3 2344.4 3077.5 2127.7 2028.4 1904.0 2835.2 3827.1 3946.5 True False 2507.3741924506962 2208.0370154762977 2629.9425744625314 2918.778105244114 2624.8038267395978 2352.851801747046 2396.934023965121 2173.8978307554494 2193.0317268840563 2962.555451963614 2966.4751321410286 0.8452368824143892 0.7443301956428893 0.8865547349336425 0.9839213124087477 0.8848224609404252 0.7931473202840892 0.8080074557156843 0.7328218622842312 0.7392719066218006 0.9986786741830579 1.0 11.534533973447791 -10.95954323278203 1.255105964229296 0.9989079707177945 0.8179197220466042 0.46348295479344037 0.0721941029252336 0.3663009906217388 1.0359431206032677 0.05578002146616867 0.013288673501068186 1.0976320186854047e-11 10.95954323278203 -0.18098824867119023 AGS(ph)SPAQGAQNEPPR ddPTM_A549_PD325901_60min_R1 2 AGSSPAQGAQNEPPR 15 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AGS(0.5)S(0.5)PAQGAQNEPPR;AGS(0.5)S(0.5)PAQGAQNEPPR 222.88 5.5107e-54 19276100.0 7666.8 7184.9 6921.5 8112.4 9248.400000000001 9088.3 7155.6 8521.9 8833.8 8903.2 10976.5 True False 8445.12789200014 7790.396738408739 7391.23461236068 8613.484523402842 8598.824289247936 9014.287898016259 7427.910273694569 8351.924019198776 8462.546106366995 8341.050432570384 9626.46008576641 0.8772828035185046 0.809269105050105 0.7678040054712623 0.8947717485619304 0.893248838372277 0.9364073416088534 0.7716138858433959 0.8676007530065853 0.8790922136455573 0.8664712010704101 1.0 13.232789661589578 -10.920723263662998 0.33402252855989434 1.0711252051340525 0.8395465439258414 0.027068964116889416 0.06408063757253102 2.078776463623607 0.2631955700617109 0.1804296394427026 0.020558415936204163 1.2002638784292231e-11 10.920723263662998 -0.23157866120821113 AGS(ph)ST(ph)PGDAPPAVAEVQGR ddPTM_A549_PD325901_60min_R1 1 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 2 AGS(0.781)S(0.391)T(0.829)PGDAPPAVAEVQGR 83.751 0.00019287 2151600.0 551.94 738.55 680.38 963.92 832.2 800.08 539.56 1266.7 695.37 717.12 972.88 True False 607.9725424832474 800.7902004414508 726.5546782573078 1023.4591491788453 773.7491429341435 793.5644137456787 560.0932510585608 1241.434674793073 666.1460171143136 671.840920815535 853.2219275944454 0.712560850607006 0.9385485470341586 0.8515424355135124 1.1995227924631084 0.9068556701486028 0.9300797226145328 0.6564449798397411 1.4549962145173014 0.7807417924577145 0.7874163791239028 1.0 9.73677723283865 -5.2608735471984325 21.446828486684367 0.9354182060822458 0.7125607559202228 0.0937954728732977 0.2078959545976447 12.101081254511142 457641.27368192433 0.02608075616330589 0.21323078494745293 5.484366290557605e-06 5.2608735471984325 -0.22285745016202296 AGSATVLSGS(ph)IAGLEGGSQLALR ddPTM_A549_MK2206_60min_R1 2 AGSATVLSGSIAGLEGGSQLALR 23 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 AGSATVLS(0.016)GS(0.984)IAGLEGGSQLALR;AGSATVLS(0.001)GS(0.999)IAGLEGGSQLALR 160.67 4.886399999999999e-33 4246200.0 1156.76 1358.0 1021.64 1352.88 2195.79 1425.9299999999998 1042.1599999999999 1341.32 2424.4 1684.3200000000002 2350.7 True False 1351.9928079332815 1427.1163995130235 1166.5239142855478 1684.3356607330913 1872.792199745424 1576.8209661442709 1231.5069820624583 1531.4562176202217 1875.2772709712563 1303.8309421889564 1766.9563139804666 0.7651534999683233 0.8076693171310629 0.6601883165168302 0.9532412586583685 1.0598972849116672 0.8923938603734503 0.6969651554588873 0.8667199101093066 1.0613036984184245 0.7378965353431879 1.0 10.787050655970491 -6.432113184149659 0.26822452918112494 1.044715557063444 0.6379854957995573 0.0 0.1439930745483942 4.072271015816004 0.3650591637828206 0.07713464242252209 0.5217142080880559 3.6973180914756993e-07 6.432113184149659 -0.4067300612638868 AGSATVLSGS(ph)IAGLEGGSQLALR ddPTM_A549_PD325901_60min_R1 2 AGSATVLSGSIAGLEGGSQLALR 23 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 AGSATVLS(0.015)GS(0.985)IAGLEGGSQLALR;AGSAT(0.002)VLS(0.133)GS(0.865)IAGLEGGSQLALR 144.75 4.023599999999999e-27 28571000.0 2364.5 2160.42 2833.7 3208.5 3388.3 3433.2 2956.6000000000004 3134.1000000000004 2588.8 2890.8 2894.8 True False 2604.5422993470993 2342.4861753946507 3026.0119224223736 3406.681757967806 3150.317497000428 3405.2411574738317 3069.1150309135996 3071.5879168461142 2480.0017387945045 2708.2743946529854 2538.757951649123 1.0259120203465022 0.9226898428316185 1.1919261229518714 1.341869458549563 1.2408892682951713 1.341302015523717 1.2089041528830933 1.2098782063295466 0.9768563155788634 1.0667714080004154 1.0 11.309907137858765 -8.762779652333801 24.98548458531471 0.9890710262888355 1.1899231474145762 0.2857360797276125 0.11831490233678019 29.248775403628958 545257.8794703231 0.021741642589673923 0.02376818489163724 1.7267137512428507e-09 8.762779652333801 0.2008521211257407 AGSATVLSGS(ph)IAGLEGGSQLALRR ddPTM_A549_PD325901_60min_R1 2 AGSATVLSGSIAGLEGGSQLALRR 24 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 AGSATVLS(0.037)GS(0.962)IAGLEGGSQLALRR;AGSATVLS(0.159)GS(0.84)IAGLEGGSQLALRR 91.583 1.0099999999999999e-07 10309400.0 3319.8999999999996 3155.8 3432.6000000000004 3804.6 3696.2 4387.3 3727.4 4467.8 3652.6 4346.200000000001 4355.3 True False 3656.933804018792 3421.7503412810643 3665.556877900637 4039.601501126478 3436.591663197765 4351.571283404679 3869.248246711545 4378.686224078702 3499.0939242586537 4071.7801902728693 3819.6257105214304 0.9574063222858481 0.8958339378268425 0.9596638926697976 1.0575909283464893 0.8997194813437948 1.139266413307976 1.0129914656437216 1.1463652608728914 0.9160829331052388 1.0660154944126754 1.0 11.899215558517188 -5.9991649251198895 24.559011057966273 0.9909119110898885 0.9269023039967362 0.08986874207837892 0.08126428022520782 44.23286957312455 1300604.2515381295 0.011212722930786916 0.03442737127180846 1.0019246807953902e-06 5.9991649251198895 -0.06400960709315229 AGSEECVFYTDETASPLAPDLAKAS(ph)PK ddPTM_A549_PD325901_60min_R1 1 AGSEECVFYTDETASPLAPDLAKASPK 27 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 AGSEECVFYT(0.001)DET(0.096)AS(0.096)PLAPDLAKAS(0.807)PK 67.69 8.764700000000001e-05 2812300.0 1017.5 1381.7 1346.7 1181.1 1474.5 1093.1 1145.5 1573.5 1146.4 1212.6 1458.3 True False 1120.7958509560895 1498.140708076571 1438.0951603649678 1254.0538645272786 1370.9362067488512 1084.19815601615 1189.0926293416517 1542.11530811313 1098.2207947133877 1136.0362290563899 1278.938344925355 0.8763486179011267 1.1713940034881116 1.1244444785560808 0.9805428615876485 1.07193299206997 0.8477329343655179 0.9297497678913151 1.2057776782063212 0.8586972148195972 0.8882650469930936 1.0 10.32073100109865 -7.22372209281688 24.527100826390242 0.9487886953215882 1.0527983655928455 0.12762131131893772 0.11557755346170501 667.567270971551 434110.97089611815 0.017026239103664662 0.029489903359587562 5.974174546739207e-08 7.22372209281688 0.10400967027125729 AGSES(ph)PHPGR ddPTM_A549_MK2206_60min_R1 2 AGSESPHPGR 10 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 AGS(0.005)ES(0.995)PHPGR;AGS(0.019)ES(0.981)PHPGR 97.163 0.00016021 9264100.0 864.1600000000001 764.0799999999999 709.74 874.9300000000001 915.71 576.51 520.13 995.4 1126.56 1484.36 1382.12 True False 1010.0090813164562 802.9684083504496 810.391804280397 1089.2878892771005 781.0102720337019 637.5159055436342 614.630888328228 1136.5009982846504 871.3959587466501 1149.0420450672077 1038.901459428546 0.9721894912651462 0.7729014153008574 0.7800468436401637 1.0484997199602257 0.7517654970504144 0.6136442486992978 0.5916161564219088 1.0939449434499684 0.8387667096222644 1.1060163932190885 1.0 10.020843104702355 -10.269854542418415 0.5639895346676699 1.008272328501281 0.8154387044292709 0.22359619512492057 0.15508351457721037 1.4660463454444659 0.8157757695003094 0.13771006985989187 0.036507660571126116 5.37211693726947e-11 10.269854542418415 -0.19283362407201 AGSES(ph)PHPGR ddPTM_A549_PD325901_60min_R1 2 AGSESPHPGR 10 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 AGS(0.036)ES(0.964)PHPGR;AGS(0.011)ES(0.989)PHPGR 88.021 0.00021903 16314800.0 911.0699999999999 1056.77 1112.26 1308.13 1269.8000000000002 1043.75 1056.7 1223.85 1085.21 1219.94 1479.5300000000002 True False 1003.5611557057143 1145.8277166346381 1187.7446521627232 1388.930219121217 1180.6136285721884 1035.2500460542099 1096.9132967484268 1199.439351658248 1039.6023976194315 1142.9127802037372 1297.5571895134128 0.773423448165743 0.8830652906052845 0.9153697900653847 1.070419269644731 0.9098740603602385 0.7978454086038637 0.8453679773141807 0.9243826486815896 0.8011996742966566 0.8808188104852105 1.0 10.341582411075013 -11.068296321321297 1.3949941139485764 0.9997298013899314 0.8751914739624479 0.00019004309590786583 0.08471167913882535 0.5123214932827397 1.7856382026613073 0.05906754885052874 0.013183469048865363 8.544834955309787e-12 11.068296321321297 -0.1245383274274835 AGSES(ph)PHPGRR ddPTM_A549_MK2206_60min_R1 1 AGSESPHPGRR 11 1 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 AGS(0.106)ES(0.894)PHPGRR 41.283 0.019998 2255900.0 259.82 292.54 157.53 146.55 357.18 240.21 203.97 209.23 251.64 343.39 606.11 True False 303.6712640108796 307.42903646063326 179.87012276085727 182.45475657887948 304.6392951534849 265.6288627615068 241.02870876955518 238.88899324000147 194.64394178650664 265.81796050528754 455.596159215 0.6665360492373562 0.6747840828823903 0.3948016661746591 0.4004747469628632 0.6686608062683927 0.5830357815552921 0.5290402561445026 0.5243437382167824 0.42722911036362005 0.5834508371696909 1.0 8.831611774606463 -10.819153975569133 0.9827611973549045 1.0096107492651496 0.5341810522679371 0.1037339902360973 0.1552566759510921 0.23680931434306868 0.3924924965166531 0.08116647544942786 0.018534602106128152 1.5165126049505456e-11 10.819153975569133 -0.4754296969972125 AGSES(ph)PHPGRR ddPTM_A549_PD325901_60min_R1 3 AGSESPHPGRR 11 1 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 AGS(0.195)ES(0.805)PHPGRR;AGSES(1)PHPGRR;AGS(0.001)ES(0.999)PHPGRR 84.71799999999999 0.00010876 12478300.0 1624.33 1382.19 1209.1200000000001 1444.69 1781.06 1488.65 1297.57 1452.08 1454.44 1520.59 1846.9299999999998 True False 1789.2307858314537 1498.6720020962266 1291.1781542292197 1533.9252201709553 1655.9644899234374 1476.5269279603347 1346.949736407549 1423.1171252652769 1393.3149447513435 1424.5796878944866 1619.7693186539022 1.1046207415006362 0.925237924213608 0.7971370610367186 0.9470022690920661 1.022345880276097 0.911566178563866 0.8315688665636177 0.878592469233797 0.8601934415631777 0.879495414247242 1.0 10.661572649295957 AGSFTGT(ph)SDPEAAPAR ddPTM_A549_MK2206_60min_R1 1 AGSFTGTSDPEAAPAR 16 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 AGS(0.076)FT(0.225)GT(0.693)S(0.007)DPEAAPAR 225.86 7.3881e-55 16155000.0 3083.0 3281.6 3346.8 3126.2 6189.9 4769.0 4748.3 4525.4 6962.3 6891.8 7837.1 True False 3603.335027886773 3448.6194231531213 3821.426565454437 3892.11914034045 5279.37390971095 5273.652414594004 5611.0046470092575 5166.889308456257 5385.350166508484 5334.937593437023 5890.931777043571 0.6116748868029068 0.5854115365233187 0.6486964558554542 0.6606966924159072 0.896186564285839 0.8952153265710785 0.9524816886990333 0.8770920295820023 0.9141762916852487 0.9056186347678975 1.0 12.524280129889608 -6.763285492333085 1.8119408221534232 0.9484768920781113 0.6059603163414334 0.9283203302106092 0.03901096783539921 0.06633843218460163 0.4418830039037215 0.006764357495799621 0.01616524356016158 1.7247037500780042e-07 6.763285492333085 -0.3425165757366778 AGSFTGT(ph)SDPEAAPAR ddPTM_A549_PD325901_60min_R1 1 AGSFTGTSDPEAAPAR 16 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 AGS(0.006)FT(0.123)GT(0.436)S(0.436)DPEAAPAR 52.527 0.018372 2916900.0 3462.0 3848.6 2940.6 3666.0 3760.1 3840.7 3817.7 3376.5 3989.1 3808.5 4340.7 True False 3813.459691410301 4172.935028662872 3140.166799264295 3892.4404939099195 3496.0035476407966 3809.4226125800287 3962.984662625598 3309.153058686992 3821.4519994689244 3568.0306600373237 3806.821417964403 1.0017437837810232 1.0961730458305132 0.8248789355985646 1.0224909620245068 0.9183523900394025 1.000683298303238 1.0410219517848303 0.8692693182483129 1.0038432539639186 0.9372729288533933 1.0 11.89437117779312 AGSIS(ph)TLDSLDFAR ddPTM_A549_PD325901_60min_R1 1 AGSISTLDSLDFAR 14 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGS(0.199)IS(0.769)T(0.024)LDS(0.007)LDFAR 112.44 7.083e-06 8277000.0 1157.5 1179.8 1327.2 1323.3 1300.5 1420.9 1075.6 1334.9 1411.2 1187.8 1293.0 True False 1275.0085478935373 1279.22588650846 1417.2717731019418 1405.037235567648 1209.157366481438 1409.3286614978936 1116.5325465909045 1308.274372291208 1351.8921715801926 1112.802105288784 1133.969197002321 1.1243767037623753 1.1280957982722364 1.2498326910894397 1.2390435642184134 1.0663053014825086 1.2428279932325261 0.984623347391172 1.1537124427627026 1.1921771553883096 0.9813336272541683 1.0 10.14716573628653 -10.871751186407316 0.8913913873186048 0.9902874283674926 1.156124600337389 0.39866198852522083 0.07656011005023723 0.5937486288306838 0.7532338643351851 0.06938553161758661 0.013271288203021698 1.3435344710237942e-11 10.871751186407316 0.16583717196989645 AGSISTLDSLDFARYS(ph)DDGNRETDEK ddPTM_A549_MK2206_60min_R1 2 AGSISTLDSLDFARYSDDGNRETDEK 26 2 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGSISTLDSLDFARYS(1)DDGNRETDEK;AGSISTLDSLDFARYS(1)DDGNRETDEK 150.62 2.2325999999999998e-33 14775200.0 3449.8 3808.1000000000004 3999.2 3053.6 5520.9 3954.1 2789.6000000000004 3578.0 5666.700000000001 4787.3 4641.8 True False 4032.0419004877685 4001.9160242897983 4566.3466955197155 3801.7321370813115 4708.782923492007 4372.520237480845 3296.4342108327255 4085.192457165442 4383.201497860425 3705.8456050757545 3489.1129528372526 1.1556065839625573 1.1469723331930393 1.3087414357871348 1.0895984705768398 1.3495644844810633 1.253189649227386 0.9447771555094409 1.1708398416404013 1.2562509603755085 1.0621168346132963 1.0 11.768644587227461 AGSISTLDSLDFARYS(ph)DDGNRETDEK ddPTM_A549_PD325901_60min_R1 2 AGSISTLDSLDFARYSDDGNRETDEK 26 2 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGSISTLDSLDFARYS(0.999)DDGNRET(0.001)DEK;AGSIST(0.002)LDS(0.044)LDFARYS(0.954)DDGNRET(0.001)DEK 207.99 2.6244999999999998e-81 30049000.0 8681.099999999999 9698.8 9308.3 9587.4 12217.1 10006.6 9108.1 9519.9 10190.5 10010.6 10193.0 True False 9562.398881311952 10516.151913941558 9940.017213355037 10179.59192343479 11359.013042706945 9925.109567277656 9454.713729643556 9330.018126282926 9762.22872341834 9378.529007580313 8939.3256187507 1.0697002535912021 1.176392086208761 1.111942627137928 1.1387427147840512 1.2706789669771985 1.1102749794077558 1.0576540259157585 1.0437049196096773 1.0920542711791994 1.0491316020425927 1.0 13.125950283500007 -7.658319499541862 3.7799031238424172 1.0453750202279157 1.1545517584678349 0.4935901381012574 0.05041544763056217 0.15549431341001843 4.245689945850384 0.008487725465138542 0.012745752952673162 2.196243557095907e-08 7.658319499541862 0.10917673823991914 AGSLQLSSMS(ph)AGNSSLRR ddPTM_A549_PD325901_60min_R1 1 AGSLQLSSMSAGNSSLRR 18 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 AGSLQLS(0.005)S(0.034)MS(0.32)AGNS(0.32)S(0.32)LRR 41.202 0.024154 7764300.0 2382.0 2165.7 2417.9 2259.9 3728.3 3188.9 3220.9 2999.9 3586.7 2908.7 3336.0 True False 2623.8188864642793 2348.211139524812 2581.9932340138553 2399.488890394714 3466.437069936755 3162.930655676426 3343.4731120441093 2940.0646411239773 3435.9634720852305 2725.044185598153 2925.6931486463563 0.8968195751076129 0.802617027903719 0.8825235945227126 0.8201437295312041 1.184825917762629 1.0810876243600027 1.1427969175752588 1.0049121667062966 1.1744100619967488 0.9314183159840127 1.0 11.514562749920938 -6.751450921305449 24.999230551492428 1.0886354952225847 0.8493894073536995 0.6575221194159415 0.07720922425993143 85.66855825548622 214410.7623168656 0.010447490696757407 0.02154563803005836 1.7723483231281137e-07 6.751450921305449 -0.23924608786888524 AGSNEDPILAPS(ph)GTPPPTIPPDETFGGRVPR ddPTM_A549_PD325901_60min_R1 1 AGSNEDPILAPSGTPPPTIPPDETFGGRVPR 31 1 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 AGS(0.019)NEDPILAPS(0.489)GT(0.489)PPPT(0.002)IPPDETFGGRVPR 50.645 0.002288 5251700.0 2250.9 2628.4 2706.5 2739.9 3119.4 3074.6 3101.4 3030.1 2880.2 2545.1 2979.8 True False 2479.409710975001 2849.9044923706015 2890.1793655066353 2909.137400235619 2900.3041053457914 3049.561476980383 3219.4254741512 2969.662278432537 2759.1552101653015 2384.4019516505177 2613.3034905085174 0.9487645503020156 1.090537131535398 1.105948611021922 1.1132030438873888 1.1098229179579242 1.1669373603396422 1.2319370811098327 1.1363633382874625 1.0558112443451424 0.912409125197526 1.0 11.351658963405956 -9.083463093059745 2.168353851966548 1.0200512621517552 1.1169606885635521 0.3461156750738962 0.07268867679640413 0.2718423878891905 2.623143118671989 0.013451126056838294 0.013055115412422599 8.25157605523479e-10 9.083463093059745 0.0969094264117969 AGSNEDPILAPSGT(ph)PPPTIPPDETFGGR ddPTM_A549_PD325901_60min_R1 2 AGSNEDPILAPSGTPPPTIPPDETFGGR 28 0 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 AGSNEDPILAPS(0.005)GT(0.995)PPPTIPPDETFGGR;AGSNEDPILAPS(0.081)GT(0.919)PPPTIPPDETFGGR 130.55 4.0616999999999996e-27 44626000.0 8200.599999999999 7954.8 7965.9 8563.4 9006.900000000001 9434.5 9343.0 8867.8 8632.4 8783.599999999999 10859.7 True False 9033.118875037357 8625.178913373027 8506.51387684807 9092.341769107523 8374.28641611816 9357.668559998508 9698.552977685767 8690.924772345476 8269.61024797963 8229.001996981444 9524.025745310206 0.9484559488392206 0.9056232253068209 0.8931636793439817 0.9546742115417683 0.8792801111695654 0.9825328921025214 1.0183249433635249 0.9125263837747432 0.8682893630408054 0.8640255934874542 1.0 13.217355805163358 -7.259452481098371 24.981753306338966 0.9437544269882039 0.9165029268903624 0.055026533333838556 0.05025536552448084 507.8622383434056 6385415.534456739 0.008564208831979348 0.014390239883110114 5.5023412180688726e-08 7.259452481098371 -0.027251500097841497 AGSNEDPILAPSGT(ph)PPPTIPPDETFGGRVPR ddPTM_A549_PD325901_60min_R1 1 AGSNEDPILAPSGTPPPTIPPDETFGGRVPR 31 1 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 AGSNEDPILAPS(0.165)GT(0.834)PPPT(0.001)IPPDETFGGRVPR 100.17 1.0505999999999999e-11 4065700.0 2773.1 2823.0 2962.6 3222.1 3181.1 3621.5 3191.5 3449.5 2841.4 3438.2 3210.2 True False 3054.623070551677 3060.9041173193605 3163.659851561043 3421.1217990799632 2957.6705101992347 3592.007704704498 3312.954278955811 3380.697016419602 2721.9858392346655 3221.111465233119 2815.365751134454 1.084982677409077 1.0872136652532505 1.1237118481981403 1.2151606936688135 1.0505457449027498 1.2758582799613496 1.1767402788148762 1.2008020680998008 0.966832049490493 1.144118295796974 1.0 11.45910664322731 -8.767881069307533 24.99939111789966 0.9843373447635815 1.1524758786524878 0.23099773213510866 0.07873437675740598 72.6506685081844 281947.34569965757 0.010636871492513064 0.011455323435321005 1.7065496602984474e-09 8.767881069307533 0.16813853388890632 AGSNMLLIGVHGPT(ph)TPCEEVSMK ddPTM_A549_MK2206_60min_R1 1 AGSNMLLIGVHGPTTPCEEVSMK 23 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 AGSNMLLIGVHGPT(0.496)T(0.496)PCEEVS(0.009)MK 51.956 0.0021742 1776000.0 1010.3 1125.0 1299.4 1306.7 1206.1 1378.2 1232.3 1077.9 1770.4 1606.8 1727.4 True False 1180.8139405364923 1182.2576947364878 1483.6744589313655 1626.841558659993 1028.684287711009 1524.0402092248808 1456.1929588504331 1230.6956259303056 1369.4072267478598 1243.822764028934 1298.438906185331 0.9094104735397927 0.9105223889276618 1.1426601990002256 1.252921143159113 0.7922469688875612 1.1737481077968783 1.1214951677076328 0.947827133080872 1.0546566497849528 0.9579370720515044 1.0 10.342562418957973 -5.724400977310124 23.176034175180398 1.042745890137073 0.9099654850111863 0.16528585525675854 0.12001555001018448 102.78065632596099 64309.71690992566 0.014933722185632594 0.05783253786691643 1.8862490006452383e-06 5.724400977310124 -0.13278040512588662 AGSNMLLIGVHGPT(ph)TPCEEVSMK ddPTM_A549_PD325901_60min_R1 1 AGSNMLLIGVHGPTTPCEEVSMK 23 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 AGSNMLLIGVHGPT(0.46)T(0.46)PCEEVS(0.08)MK 50.498999999999995 0.0025243 3195800.0 1626.7 1779.9 2470.3 1776.2 2102.1 2464.1 1908.0 2124.8 2118.8 1504.9 2415.0 True False 1791.8413864867528 1929.8984195595945 2637.94941312065 1885.9118399571196 1954.4557478513118 2444.033186569751 1980.609984097661 2082.4191971266455 2029.7542043254782 1409.8803571721594 2117.9703099463295 0.8460181797978834 0.9112018287019799 1.2455082116743634 0.8904335585350626 0.9227965749438852 1.1539506361785044 0.9351453015164555 0.9832145367417426 0.9583487524794024 0.665675222429292 1.0 11.04846665019941 -5.532225252783803 24.999913367302863 0.9949302311868583 0.8623139417118162 0.05201473786441024 0.14076074077162906 192.23772096157677 514196.677598613 0.01254920784382217 0.04873107621329452 2.9361263947807047e-06 5.532225252783803 -0.13261628947504212 AGSPS(ph)RDVGPSLGLKK ddPTM_A549_PD325901_60min_R1 1 AGSPSRDVGPSLGLKK 16 2 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 AGS(0.455)PS(0.545)RDVGPSLGLKK 93.26899999999999 2.5802999999999997e-06 11706000.0 3706.6 3875.5 4427.0 4252.9 4434.9 6195.7 4584.3 5743.5 5647.7 4733.4 4626.1 True False 4082.8913033452977 4202.101986068432 4727.442841713604 4515.591973963308 4123.407923574419 6145.244273377786 4758.758045125218 5628.941386811415 5410.346809405792 4434.532316192904 4057.119027264063 1.00635235888029 1.035735446219368 1.1652216289305117 1.1130045590524413 1.0163389084384489 1.5146817808601145 1.1729402103182338 1.3874232796683112 1.3335440180699565 1.0930249485885435 1.0 11.986239913438617 -5.84844449672577 0.9817620261668708 1.1967371432449865 0.98202809798107 0.18975013898406912 0.14846905360667645 1.5949543476719077 2.0142473678805035 0.026725207181065296 0.2896259929602873 1.4176058713311213e-06 5.84844449672577 -0.21470904526391643 AGSRLS(ph)AEER ddPTM_A549_MK2206_60min_R1 2 AGSRLSAEER 10 1 B1AJQ6;Q86Y82 B1AJQ6 STX12 Syntaxin-12 1 AGS(0.139)RLS(0.861)AEER;AGS(0.005)RLS(0.995)AEER 94.68799999999999 0.00015977 271790000.0 1533.17 1773.9699999999998 2538.1 2130.48 3110.8 2535.0 2532.7 2438.3 3923.7000000000003 3529.2 3923.3 True False 1791.9316135923345 1864.2574957615009 2898.0407451236724 2652.4476956408803 2653.205440851842 2803.2520174031883 2992.8588062001877 2783.9364919805744 3034.988214861376 2731.9512688641485 2949.036332428452 0.607632938898629 0.6321581986839527 0.9827077114160929 0.8994286257086094 0.8996855724279933 0.9505654394887654 1.0148599301032175 0.9440156641570019 1.029145752287882 0.9263877961837317 1.0 11.526027881321303 -4.78628530387795 0.5772503000681294 1.0067224904221916 3.266214477908747e-12 0.7766513804585666 0.06515936304416436 1.4704156462561155 0.22503309631838195 0.010029073082425307 1.118260982831242 1.6357415901019888e-05 4.78628530387795 -1.0067224904189254 AGSRLS(ph)AEER ddPTM_A549_PD325901_60min_R1 2 AGSRLSAEER 10 1 B1AJQ6;Q86Y82 B1AJQ6 STX12 Syntaxin-12 1 AGS(0.027)RLS(0.973)AEER;AGS(0.008)RLS(0.992)AEER 73.92699999999999 0.00046047 275050000.0 2368.68 2231.75 2353.58 2631.6000000000004 3135.1000000000004 2600.0 2470.38 2922.34 2644.69 2999.3 2980.89 True False 2609.146649869946 2419.827404827305 2513.3080920262723 2794.1479552027663 2914.901391507851 2578.826462027251 2564.3916627438048 2864.0516361686205 2533.5428764572125 2809.9236861362597 2614.2594274185967 0.9980442730759513 0.9256263473502016 0.9613843468121268 1.0688105112665873 1.1150008147378538 0.9864462703969923 0.9809247069545685 1.0955498930711236 0.9691245061164085 1.074845004541446 1.0 11.352186599505837 -6.041916950346903 24.82854804722852 1.0067681804748694 0.9572527403704808 0.13336420339808863 0.055010823654937556 654.799032027707 387854.89151078305 0.007620014869422365 0.020163118662528175 9.079941482932664e-07 6.041916950346903 -0.049515440104388575 AGSRPQS(ph)PSGDADAR ddPTM_A549_MK2206_60min_R1 2 AGSRPQSPSGDADAR 15 1 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 1 AGS(0.009)RPQS(0.984)PS(0.007)GDADAR;AGS(0.009)RPQS(0.951)PS(0.041)GDADAR 82.65100000000001 0.00022519 6441700.0 537.47 390.39 466.96000000000004 404.80999999999995 615.83 676.56 486.13 435.855 767.8599999999999 831.74 937.6700000000001 True False 628.1817961201116 410.25918350949144 533.1819496248968 503.98846817261136 525.242222785068 748.1531301358192 574.4535284313571 497.6387809999565 593.9409360204536 643.8493563314826 704.8206606245225 0.8912647304684524 0.5820759895800612 0.7564788880514068 0.7150591580644654 0.7452139985789649 1.0614801352061687 0.8150350302193886 0.7060502178795558 0.8426837764576575 0.9134938748262361 1.0 9.461112404815777 -14.99999999997245 0.10232275647059494 1.7287049780787624 0.6387449408552509 0.2404270514905098 0.11612790867078801 82.12101522021051 0.6022990898108919 12.598367221638199 0.7232892591248608 1.0000000000634351e-15 14.99999999997245 -1.0899600372235114 AGSRPQS(ph)PSGDADAR ddPTM_A549_PD325901_60min_R1 3 AGSRPQSPSGDADAR 15 1 O94819 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 1 AGS(0.008)RPQS(0.95)PS(0.041)GDADAR;AGS(0.001)RPQS(0.5)PS(0.5)GDADAR;AGS(0.222)RPQS(0.771)PS(0.007)GDADAR 93.90899999999999 1.9438e-05 38216100.0 3305.0699999999997 3061.62 3017.61 2884.67 4220.61 3473.93 3420.0200000000004 3226.78 3289.69 3944.12 3296.56 True False 3640.598273336063 3319.6334621563224 3222.403160963045 3062.8495143390955 3924.1689139140494 3445.6394658578215 3550.1707326067553 3162.4193415400605 3151.435769505135 3695.0875900922697 2891.1040186155983 1.2592415388358662 1.1482234609275404 1.1145926055286275 1.059404813738157 1.3573253984106504 1.1918075045628285 1.2279636809147914 1.093844884576094 1.0900457919235282 1.2780887738040148 1.0 11.497404800928184 -8.992312895539738 0.9061681764375904 1.0231702343615454 1.1889232557415912 0.0 0.10843838125589526 0.3365227676730781 0.5734071564568984 0.019672390404221047 0.018179919470883325 1.017857789236417e-09 8.992312895539738 0.16575302138004577 AGSS(ph)PAQGAQNEPPR ddPTM_A549_MK2206_60min_R1 1 AGSSPAQGAQNEPPR 15 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 AGS(0.088)S(0.912)PAQGAQNEPPR 188.39 1.6229e-33 8109200.0 2925.6 3046.7 3027.2 3039.0 4073.8 3269.4 2652.3 3235.6 4190.6 5072.9 5509.9 True False 3419.3697559473053 3201.7640164921404 3456.5024796652524 3783.5551364258963 3474.5494165302284 3615.365737947921 3134.188578072714 3694.256208609422 3241.4357910130952 3926.9283667179375 4141.639764496094 0.8256077182906162 0.7730667558146967 0.8345734241050775 0.9135403732744087 0.8389308617122017 0.8729309991999741 0.7567506486054913 0.8919791238914994 0.7826455161069458 0.9481578770759459 1.0 12.015986359568581 -10.870630782715615 1.015918483949644 1.004175015322123 0.8302336977095384 0.5540801309540295 0.04843066373405364 0.28101234296894834 0.49410775267808016 0.0364912768976073 0.008000510626135993 1.3470050294152319e-11 10.870630782715615 -0.17394131761258458 AGSS(ph)T(ph)PGDAPPAVAEVQGR ddPTM_A549_PD325901_60min_R1 1 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 2 AGS(0.088)S(0.916)T(0.996)PGDAPPAVAEVQGR 113.47 5.8659e-11 2209600.0 642.58 723.92 549.59 851.16 669.43 1037.7 650.01 666.82 897.89 815.49 670.83 True False 707.8142485576058 784.9272789974607 586.8884823531469 903.7342200753864 622.4115462081273 1029.2493152483385 674.7464862491202 653.5197519898295 860.1548057965838 763.9998222276057 588.3221627417373 1.2031065517895903 1.3341793471445837 0.9975631032121769 1.536121324860082 1.0579433950057642 1.7494654807015322 1.1468996563118115 1.110819536262673 1.462047259596739 1.2986079237048693 1.0 9.200462574955639 -11.023768126583636 1.2950030832445216 0.9989912508668615 1.3056254195900898 0.0 0.2308522183386207 0.537551179950399 1.5970888388337336 0.14513104891829368 0.03226663392223427 9.467425001037632e-12 11.023768126583636 0.30663416872322835 AGSS(ph)TPGDAPPAVAEVQGR ddPTM_A549_MK2206_60min_R1 2 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AGS(0.33)S(0.625)T(0.045)PGDAPPAVAEVQGR;AGS(0.039)S(0.888)T(0.073)PGDAPPAVAEVQGR 346.37 6.563999999999997e-230 142493000.0 15353.7 17987.6 18015.0 15704.4 22210.1 17372.2 16300.0 17900.3 23577.1 26386.1 27639.4 True False 17945.02919807498 18903.092008748485 20569.79788952482 19551.9787049973 18943.023711541562 19210.514673266927 19261.499009382504 20437.722342369645 18236.924494892104 20425.461684057667 20775.774171366713 0.8637477982797348 0.9098622199504282 0.9900857469790093 0.9410950727383215 0.9117842519509546 0.9246593900574336 0.9271134182777558 0.98372855681773 0.8777975898499288 0.9831384147507799 1.0 14.342614616948525 -11.062778827455494 1.368297650818103 1.000067196045988 0.9225851622617574 0.3242036607867712 0.03643334611956554 0.3862995468608286 1.2885511435091146 0.027446790949773783 0.0060593489408466905 8.654085319658665e-12 11.062778827455494 -0.07748203378423058 AGSS(ph)TPGDAPPAVAEVQGR ddPTM_A549_PD325901_60min_R1 2 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AGS(0.035)S(0.9)T(0.065)PGDAPPAVAEVQGR;AGS(0.158)S(0.827)T(0.015)PGDAPPAVAEVQGR 340.49 1.9557999999999993e-206 190019000.0 21610.9 21939.4 21465.8 22179.6 26217.0 22732.7 22250.1 23140.0 24246.0 25802.0 25213.0 True False 23804.82265889628 23788.310234330995 22922.59827234151 23549.583518473653 24375.608363740015 22547.57242820267 23096.839731221902 22678.454547021185 23227.024937736234 24172.85731660314 22111.960838375475 1.07655864773344 1.0758118833607104 1.0366605856392062 1.0650156126182702 1.1023720845885348 1.0197002695966786 1.0445405497976987 1.0256193339336308 1.0504280966989394 1.0932027916154303 1.0 14.432539345290053 -14.999999992956301 0.10714270525433152 0.8167074672980129 1.0912211482193588 0.0 0.0340931527346159 55.150859369366195 0.42038957465940996 2.236342436443403 0.11359428215517232 1.0000000162187164e-15 14.999999992956301 0.27451368092134587 AGSSPCLGSSSAASS(ph)PPPPASR ddPTM_A549_MK2206_60min_R1 2 AGSSPCLGSSSAASSPPPPASR 22 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 AGSSPCLGSSSAAS(0.12)S(0.88)PPPPASR;AGSSPCLGSSSAAS(0.21)S(0.79)PPPPASR 157.11 1.3305e-32 9868400.0 1224.1 1606.8899999999999 1472.8200000000002 1717.63 2547.0 1473.9 1855.11 1239.0900000000001 2156.41 2025.33 2073.81 True False 1430.6981536283492 1688.673837417881 1681.688022628362 2138.449427107342 2172.339673990498 1629.867119704362 2192.159474067214 1414.734802053977 1667.986578079164 1567.806546347226 1558.8257427557025 0.9178050595309977 1.0832986594336274 1.0788171997053775 1.3718335337001666 1.3935744159255552 1.0455736488050755 1.406288986600837 0.9075644334388522 1.070027606248333 1.005761262048218 1.0 10.606243946428794 -8.287121556698636 24.999236807876393 1.0245797613616945 1.187102812021585 0.2555150778718581 0.1527231151198652 914.7209563464286 890393.8161703243 0.024899310154149906 0.03010616793909698 5.162718473235528e-09 8.287121556698636 0.16252305065989048 AGSST(ph)PGDAPPAVAEVQGR ddPTM_A549_MK2206_60min_R1 2 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AGS(0.001)S(0.102)T(0.898)PGDAPPAVAEVQGR;AGSS(0.02)T(0.98)PGDAPPAVAEVQGR 235.26 7.213999999999997e-85 59565000.0 10029.1 11086.0 10723.9 10484.7 14758.5 10553.7 10910.4 10357.599999999999 15928.2 15657.9 15676.0 True False 11721.766892046464 11650.230047865522 12244.71027407578 13053.451970676077 12587.544200466726 11670.485529020923 12892.678453494893 11825.821518819674 12320.488132108709 12120.769515116166 11783.21656440966 0.9947849831981531 0.9887139037276278 1.039165342259772 1.1078003955306286 1.0682604475323383 0.9904329149199181 1.0941561145906695 1.0036157321031252 1.045596341606912 1.0286469275058612 1.0 13.524445797162954 -5.759027361664092 24.9832027067067 1.0332548774151469 0.9917494282357043 0.19151747954343112 0.036352290790136785 86.55931341024562 896499.7409182481 0.005265563289978046 0.01864637140419985 1.7416971385566362e-06 5.759027361664092 -0.041505449179442544 AGSST(ph)PGDAPPAVAEVQGR ddPTM_A549_PD325901_60min_R1 2 AGSSTPGDAPPAVAEVQGR 19 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AGS(0.008)S(0.055)T(0.936)PGDAPPAVAEVQGR;AGSS(0.071)T(0.928)PGDAPPAVAEVQGR 296.95 9.177999999999996e-144 86836000.0 32877.0 35508.0 33504.0 36586.0 46958.0 34645.0 39714.0 37731.0 41755.0 41752.0 42796.0 True False 36214.64883723182 38500.383775336835 35777.78291591885 38845.8341271654 43659.832076305545 34362.862606513154 41225.338002334654 36978.42560560312 40000.18255692387 39115.77159455912 37532.363306195926 0.9648912471028284 1.0257916204541564 0.9532515345233422 1.0349956865293544 1.1632582718045383 0.9155528610382084 1.0983944087402853 0.9852410652621665 1.0657517681632522 1.0421878120342558 1.0 15.195847515038993 -6.292538374510493 22.014837611562466 1.0346126088592913 0.9857594963896543 0.13942016109760935 0.06219517058555772 243.4675766691829 172349.2970555115 0.008138633304503267 0.018916505483813083 5.098725429528869e-07 6.292538374510493 -0.04885311246963697 AGT(ph)EDEEEEEEGR ddPTM_A549_PD325901_60min_R1 1 AGTEDEEEEEEGR 13 0 F8WBH7;O95456-2;O95456 F8WBH7 PSMG1 Proteasome assembly chaperone 1 1 AGT(1)EDEEEEEEGR 78.814 0.0008583 1312800.0 304.06 327.64 271.12 264.42 278.84 225.92 216.38 316.94 387.68 348.84 290.15 True False 334.9279473628585 355.2513726526801 289.519833577003 280.75262285860896 259.25524034577813 224.08018242353725 224.61445930767925 310.61838306538004 371.3871577935157 326.8141828665932 254.46338941239236 1.3162127099551537 1.39608048714995 1.1377661605685718 1.1033124391957672 1.018831199821912 0.8805989063534204 0.882698528170829 1.2206800506063404 1.4594915152671828 1.284326926640699 1.0 7.991314295142267 -10.344932605024544 0.0054782268494824385 8.470491703724571e-05 2.3243654800045666 0.0 0.18976719001683043 77350.548709169 115.39262412503862 25014.76272601197 23946.215405961473 4.5192607002594226e-11 10.344932605024544 2.324280775087529 AGT(ph)EDEEEEEEGRR ddPTM_A549_MK2206_60min_R1 1 AGTEDEEEEEEGRR 14 1 F8WBH7;O95456-2;O95456 F8WBH7 PSMG1 Proteasome assembly chaperone 1 1 AGT(1)EDEEEEEEGRR 70.41 0.0014605 65811000.0 0.0 205.63 0.0 191.72 248.69 132.86 189.5 146.8 0.0 180.76 218.7 True False 0.0 216.09568868325695 0.0 238.6914086066379 212.10803043765097 146.91915701466965 223.9296970722689 167.60934955614505 0.0 139.9261904567278 164.3907541870626 0.0 1.3145245896089663 0.0 1.4519758716784492 1.2902673966462261 0.8937191008168758 1.3621793888569673 1.0195789318261776 0.0 0.8511804155208375 1.0 7.360985349721476 AGT(ph)EDEEEEEEGRR ddPTM_A549_PD325901_60min_R1 5 AGTEDEEEEEEGRR 14 1 F8WBH7;O95456-2;O95456 F8WBH7 PSMG1 Proteasome assembly chaperone 1 1 AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR 156.49 3.5319e-19 331071100.0 3449.19 3252.0899999999997 3607.29 3404.09 3472.7200000000003 3346.2400000000002 3274.0200000000004 3460.2099999999996 3710.42 3357.4700000000003 3615.43 True False 3799.3492296405248 3526.1550375108454 3852.102391796947 3614.352908050686 3228.8081274336205 3318.9893308823357 3398.61462271249 3391.193397067765 3554.483950733119 3145.4787712105854 3170.755030099073 1.1982474816169608 1.1120868701738424 1.2148848949950526 1.1399029170467807 1.0183089191008028 1.0467504740593698 1.0718628813801163 1.0695223582005338 1.1210213078561468 0.992028315448987 1.0 11.630610704988346 AGT(ph)EDEEEEEEGRRETPEDR ddPTM_A549_PD325901_60min_R1 2 AGTEDEEEEEEGRRETPEDR 20 2 F8WBH7;O95456-2;O95456 F8WBH7 PSMG1 Proteasome assembly chaperone 1 1 AGT(1)EDEEEEEEGRRETPEDR;AGT(1)EDEEEEEEGRRETPEDR 110.26 1.7241e-10 11468900.0 788.55 645.5699999999999 453.3 825.37 874.8599999999999 824.62 683.51 776.39 1170.32 852.04 894.96 True False 868.6030155001718 699.9744495281117 484.0636639143387 876.3512303487257 813.4128517031539 817.9045681218894 709.5213470810234 760.904292383828 1121.1355202974287 798.2420489899442 784.8855936188685 1.1066619422778647 0.8918171708321752 0.6167314929077352 1.1165337183832578 1.0363457532106748 1.0420685189936796 0.9039805964709283 0.9694461187337252 1.4284062918370233 1.0170170729080314 1.0 9.616338569196348 -8.614054150125 13.023045170989292 1.2022809410061621 0.9542651531284337 0.18035482583219686 0.16807298112261304 0.6658546321393248 91.95593579087549 0.033132843492173485 0.03756815879596973 2.4319007679640117e-09 8.614054150125 -0.24801578787772838 AGT(ph)PIRDSHSPDLQLPTPEVIPSSGSK ddPTM_A549_PD325901_60min_R1 1 AGTPIRDSHSPDLQLPTPEVIPSSGSK 27 1 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5 H3BPE1 MACF1 1 AGT(0.333)PIRDS(0.333)HS(0.333)PDLQLPTPEVIPSSGSK 48.831 0.005981 1446700.0 1051.8 1036.6 908.89 1085.4 937.72 1231.2 1016.3 1025.4 1065.9 1110.2 1275.2 True False 1158.5779617057635 1123.9579199480165 970.5727409995663 1152.4426928777482 871.8577821583809 1221.173515403059 1054.9758526406995 1004.9475925892614 1021.103929767098 1040.101782532082 1118.3584841588245 1.035962956526583 1.0050068344529113 0.8678547663807321 1.0304769974938404 0.7795870416400073 1.0919338769281721 0.9433253000572546 0.898591647333131 0.9130381217030988 0.9300253874448824 1.0 10.127166995579385 -5.537977914712452 24.92036738666911 0.9497866340027802 1.0282239789482537 0.1282234835992052 0.07941972220213482 290.5652966376908 479563.0597364558 0.010014758958084137 0.03881665748678743 2.8974909307967786e-06 5.537977914712452 0.0784373449454735 AGT(ph)VVLDDVELR ddPTM_A549_MK2206_60min_R1 1 AGTVVLDDVELR 12 0 P25205 P25205 MCM3 DNA replication licensing factor MCM3 1 AGT(1)VVLDDVELR 54.7 0.021238999999999997 420520.0 261.09 0.0 209.81 130.52 221.15 90.992 164.52 133.82 294.51 296.26 379.23 True False 305.15560896236053 0.0 239.56421288932566 162.49740585926543 188.6191279556335 100.6207130443988 194.41115441862627 152.78939480656214 227.8039552358294 229.3346602384939 285.05672478445234 1.070508367038547 0.0 0.8404089153500022 0.570052876255205 0.6616898026112493 0.3529848773800508 0.6820086583315361 0.5359964579754957 0.7991530647385532 0.8045228907050235 1.0 8.15510522632285 -9.196234526301597 0.9374356418315901 0.9562509397912458 0.567791700586921 0.1678691612791241 0.26243546520023353 0.4067239734689894 0.7532313936135979 0.06086918613852981 0.050818325054877315 6.364517334839712e-10 9.196234526301597 -0.3884592392043248 AGTATS(ph)PAGSSPAVAGGTQR ddPTM_A549_MK2206_60min_R1 2 AGTATSPAGSSPAVAGGTQR 20 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AGTAT(0.112)S(0.888)PAGSSPAVAGGTQR;AGTAT(0.088)S(0.912)PAGSSPAVAGGTQR 223.06 6.449899999999999e-75 27421000.0 3128.7 3035.0 2974.7 2406.5 3884.2000000000003 2858.8 2553.7 3219.3 4148.299999999999 4398.4 4504.6 True False 3656.7480706290457 3189.468536466882 3396.5571902286683 2996.0926080318914 3312.839325368627 3161.3163184821447 3017.674234371786 3675.6456336927636 3208.7166734738726 3404.7983851785316 3385.9834993646186 1.0799662996926112 0.9419622207448404 1.0031227827501328 0.8848515087548742 0.9783979532062939 0.9336478807635558 0.8912253219597951 1.0855474146234028 0.9476468724894819 1.0055566974314682 1.0 11.725359227345482 -11.075940584560541 1.291616810838622 1.0006296926714673 0.9666853308074175 0.029323128945662358 0.06247298564275663 1.4995524442635475 4.322451973423717 0.04608996963200234 0.009355767371024466 8.395748401453286e-12 11.075940584560541 -0.03394436186404981 AGTATS(ph)PAGSSPAVAGGTQR ddPTM_A549_PD325901_60min_R1 2 AGTATSPAGSSPAVAGGTQR 20 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AGT(0.001)AT(0.084)S(0.915)PAGSSPAVAGGTQR;AGT(0.002)AT(0.185)S(0.813)PAGSSPAVAGGTQR 281.65 1.0387999999999997e-126 27753000.0 6903.6 6553.9 5241.799999999999 6591.5 7229.1 6299.4 6503.4 5934.8 7707.400000000001 6600.3 7301.0 True False 7604.448389838291 7106.220153914052 5597.54006950404 6998.641984617356 6721.352955041111 6248.099774959415 6750.890445797028 5816.425758239465 7383.4847812054895 6183.555931585759 6403.0232848522355 1.187634036538379 1.1098226318691335 0.8742026727821303 1.093021479583588 1.0497155259363111 0.9758046311873758 1.0543285797144841 0.9083874131770695 1.1531247744597075 0.9657244174348585 1.0 12.644537541053644 -11.476869246199586 0.0019379975178315028 0.3509144109825276 1.7461894845501065 0.0 0.09558637705214079 1966658.1442213447 660.8033789533746 240885.56551016786 234891.25153256085 3.335268131504858e-12 11.476869246199586 1.395275073567579 AGTATSPAGSS(ph)PAVAGGTQR ddPTM_A549_MK2206_60min_R1 1 AGTATSPAGSSPAVAGGTQR 20 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AGT(0.001)AT(0.021)S(0.096)PAGS(0.275)S(0.607)PAVAGGTQR 83.89399999999999 9.5747e-05 4898700.0 1300.7 998.63 1063.3 825.42 1272.9 1110.4 1242.3 1108.6 1401.1 1618.1 1507.4 True False 1520.2263609381532 1049.4560015063994 1214.0919287222719 1027.6479370545119 1085.6580962004336 1227.9017909761344 1468.0098294083357 1265.747444945111 1083.7530870969424 1252.5700861807443 1133.0709778764433 1.3416867880486192 0.9262049968601687 1.071505627121149 0.9069581315907401 0.9581554177966247 1.083693621098141 1.2956027098669685 1.1170945771793792 0.9564741382115969 1.105464803739181 1.0 10.146022522010309 -8.767108381507681 24.99380761754295 0.9794461166211448 1.07816087188075 0.01931394647971474 0.13549598114288983 234.86188611765084 1035470.5722475601 0.022410409216447873 0.02418533649668822 1.7095886209417562e-09 8.767108381507681 0.09871475525960527 AGTATSPAGSS(ph)PAVAGGTQR ddPTM_A549_PD325901_60min_R1 2 AGTATSPAGSSPAVAGGTQR 20 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AGTATS(0.007)PAGS(0.123)S(0.87)PAVAGGTQR;AGTATS(0.005)PAGS(0.466)S(0.529)PAVAGGTQR 130.77 8.8674e-17 14711800.0 3937.8999999999996 3558.8 4336.6 3718.3 5855.2 4275.8 4052.7 4000.2 4375.8 5084.3 5246.9 True False 4337.672709071237 3858.7125656096864 4630.907754094249 3947.9709461280004 5443.950951343419 4240.979302436974 4206.927716222532 3920.4128729038075 4191.900343254399 4763.276430307934 4601.5645628395005 0.9426517111376954 0.8385653429207955 1.0063767857332075 0.8579627411968365 1.1830652111907138 0.9216385523927063 0.9142385505564983 0.8519738926545947 0.9109728410868347 1.035142800945217 1.0 12.167908755239745 -7.775795690289984 0.005840715351437173 1.8841426474840368 4.204296197451334e-07 0.03978215179280331 0.09407787568769542 16746.548322183513 47.06224087215567 7504.142143124586 7675.341093570315 1.6757310223516115e-08 7.775795690289984 -1.884142227054417 AGTDGKDRDRDR ddPTM_A549_MK2206_60min_R1 1 AGTDGKDRDRDR 12 3 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 0 38.402 0.036641 5122100.0 768.17 904.49 646.63 476.89 356.1 278.18 297.48 144.5 281.8 1362.6 1588.4 False True 897.8183160466377 950.5246776108504 738.3318573024384 593.7280714084059 303.7181617228175 307.6168229590608 351.5282653565096 164.9833175126905 217.97274994212998 1054.7877136332 1193.9564423901697 0.7519690703701921 0.7961133621491286 0.6183909488560395 0.49727783219614563 0.2543795995730021 0.2576449291091773 0.2944230232158123 0.13818202377836497 0.18256340198288346 0.8834390235556925 1.0 10.22153449019785 -10.906217253978426 1.1869167667917822 0.9965169909408683 0.3998227298193655 0.4576465368613636 0.21670486407786488 0.3521864060086989 0.8895001885884151 0.16885859287364302 0.041175805388432005 1.2410313316083542e-11 10.906217253978426 -0.5966942611215028 AGTDS(ph)PVSCASVTEER ddPTM_A549_MK2206_60min_R1 2 AGTDSPVSCASVTEER 16 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 AGT(0.028)DS(0.972)PVSCASVTEER;AGTDS(1)PVSCASVTEER 179.79 6.0956e-29 96095000.0 2790.2 3264.3999999999996 2716.0 2477.2 4104.6 3320.2 2503.56 2815.0 4568.8 4181.5 4314.9 True False 3261.1175461594794 3430.54401662026 3101.169640185925 3084.1141112057335 3500.818777330743 3671.541360229613 2958.424445394458 3214.0348705759407 3533.9740948743924 3236.896245822123 3243.3912448182723 1.0054653601749488 1.0577028047729327 0.9561503395991574 0.9508917914645653 1.079369867241192 1.1320069282715628 0.9121392462660541 0.9909488643131684 1.089592290328946 0.9979974666927631 1.0 11.663287348823856 -6.763538096710461 24.999864838925696 1.0382913629362434 0.9946060069961412 0.060994446454331386 0.061670857735950935 110.15642052848207 1312217.4741624622 0.009361636252820368 0.01832936450659454 1.7237008797720238e-07 6.763538096710461 -0.043685355940102144 AGTDS(ph)PVSCASVTEER ddPTM_A549_PD325901_60min_R1 2 AGTDSPVSCASVTEER 16 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 AGT(0.001)DS(0.999)PVSCASVTEER;AGT(0.002)DS(0.998)PVSCASVTEER 251.28 2.3294999999999995e-77 160999000.0 4112.1 3833.7 4542.6 4169.4 4128.1 4017.4 3970.8999999999996 4246.4 3563.1 4175.6 5078.0 True False 4529.557364831978 4156.7793533713175 4850.888152872879 4426.934368605568 3838.1564971718767 3984.6836263647274 4122.014772459854 4161.702220763644 3413.355298014019 3911.9519033876477 4453.438192094187 1.0170922261530246 0.9333865597933968 1.0892456442943907 0.9940486827602842 0.8618411958619819 0.8947432196181369 0.9255803257306499 0.9344919680599952 0.766453951033487 0.8784116304414432 1.0 12.12070385612378 -6.691368791900145 6.279056206141454 0.892384719557206 1.0104186662937553 0.43084027594947905 0.06308190040661421 0.21428804038223648 14.755830066228246 0.012555555092185693 0.026232635347364554 2.0353130072912935e-07 6.691368791900145 0.11803394673654932 AGTEKLR ddPTM_A549_MK2206_60min_R1 1 AGTEKLR 7 1 A0A0G2JR78;Q9NY99-2;Q9NY99 A0A0G2JR78 SNTG2 Gamma-2-syntrophin 0 54.525 0.042706 2080600.0 769.95 761.75 832.56 732.55 1081.1 821.72 709.42 940.43 1232.8 1144.2 1053.5 False True 899.898736529816 800.519821302684 950.629527110896 912.0247828854189 922.0716221245102 908.6738649864099 838.3124311187811 1073.7388324460867 953.5727683770681 885.7244253185877 791.8868748791513 1.1363980955829687 1.0109017420257789 1.200461274542491 1.1517109473807123 1.1643981626355737 1.1474793860235166 1.0586265004666415 1.3559245221862637 1.2041780191426856 1.1184986813347007 1.0 9.62915053837805 -10.818017500913545 1.1385560143709257 1.0025542290556375 1.160515492838069 0.11164520882633433 0.0892091082951604 0.44525960531526937 1.050306373973019 0.05337525211531488 0.01414131261192366 1.5204862569422605e-11 10.818017500913545 0.15796126378243147 AGTEKLR ddPTM_A549_PD325901_60min_R1 1 AGTEKLR 7 1 A0A0G2JR78;Q9NY99-2;Q9NY99 A0A0G2JR78 SNTG2 Gamma-2-syntrophin 0 57.103 0.036373 2354900.0 1389.4 1520.0 1553.4 1018.2 1587.5 1235.5 1559.0 1480.4 1334.6 1481.0 1668.1 False True 1530.4508651777808 1648.0957344404628 1658.823065353043 1081.0919015000213 1475.9994765776885 1225.4384976287195 1618.3285981175345 1450.872260648667 1278.511403196518 1387.4894072509583 1462.934274957131 1.0461514856657714 1.126568542861406 1.1339012925933751 0.7389887023678497 1.0089308192748032 0.8376579307806764 1.106220987381649 0.9917549171449841 0.8739363244695204 0.9484290791475348 1.0 10.514649239836787 AGTFIAPPVYSNITPYQS(ph)HLRSPVR ddPTM_A549_MK2206_60min_R1 1 AGTFIAPPVYSNITPYQSHLRSPVR 25 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AGTFIAPPVYS(0.012)NIT(0.01)PY(0.001)QS(0.531)HLRS(0.445)PVR 86.95299999999999 9.1584e-09 5088900.0 1052.8 1245.1 1236.2 1105.1 1938.8 1250.6 1004.3 1204.2 1920.4 1890.0 1635.6 True False 1230.4869015112545 1308.4702717479122 1411.5117486000877 1375.8495496098237 1653.6050883128296 1382.9376619189054 1186.7683101302355 1374.899037707833 1485.4324662486395 1463.047687337993 1229.4353797364406 1.0008552883641915 1.0642855194458571 1.1480975510096998 1.1190905779080236 1.345011796120037 1.1248559173686474 0.9652953946913811 1.1183174491062524 1.208223295613209 1.1900159304441302 1.0 10.263780192199748 -11.054655113840752 1.3670756433981996 1.0001550629971416 1.1327814499580402 0.0 0.11090118135884336 0.5920922378841903 1.9774923369383643 0.07164524394183394 0.01601824775087187 8.817488179976058e-12 11.054655113840752 0.13262638696089857 AGTFIAPPVYSNITPYQSHLRS(ph)PVR ddPTM_A549_MK2206_60min_R1 3 AGTFIAPPVYSNITPYQSHLRSPVR 25 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AGTFIAPPVYSNIT(0.137)PYQS(0.068)HLRS(0.795)PVR;AGTFIAPPVYS(0.021)NIT(0.063)PYQS(0.21)HLRS(0.706)PVR;AGTFIAPPVYS(0.008)NIT(0.361)PYQS(0.257)HLRS(0.374)PVR 99.319 9.5354e-10 59192200.0 5410.0 6319.7 7082.4 6360.0 8437.199999999999 5939.2 6663.5 6271.0 10078.8 9068.6 10225.599999999999 True False 6323.075738198978 6641.345736378826 8086.790817250658 7918.200285511253 7196.099056691259 6567.6822018781095 7874.171696258912 7159.933454132054 7795.967892536332 7019.996961583764 7686.301307797108 0.8226421896556082 0.8640496215834965 1.052104320845097 1.0301704250754395 0.9362239090720291 0.8544658788246756 1.024442235730627 0.9315187067762881 1.014267796739633 0.9133127469856751 1.0 12.90807381671521 -5.639959873039002 5.744830940633231 0.9918520266663414 0.8333008238692795 0.3903308136657472 0.059386577204142935 0.11276615482868423 5.095184858789213 0.007604400674185709 0.030628475643983126 2.2910793289637193e-06 5.639959873039002 -0.15855120279706192 AGTFIAPPVYSNITPYQSHLRS(ph)PVR ddPTM_A549_PD325901_60min_R1 3 AGTFIAPPVYSNITPYQSHLRSPVR 25 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AGTFIAPPVYS(0.11)NIT(0.075)PYQS(0.176)HLRS(0.638)PVR;AGTFIAPPVYS(0.004)NIT(0.053)PYQS(0.131)HLRS(0.813)PVR;AGTFIAPPVYSNITPYQS(0.035)HLRS(0.965)PVR 173.98 1.7359e-48 139266000.0 7602.0 8800.9 7774.4 9475.9 11028.1 9466.1 7066.099999999999 8358.7 10107.8 8969.4 9095.5 True False 8373.749443703384 9542.582729761234 8302.017535265028 10061.204821669658 10253.524300879626 9389.01122007546 7335.00430221828 8191.979171226707 9683.00431682134 8403.070553272615 7976.811161124988 1.049761524318499 1.1962904144286426 1.040768969901774 1.261306632242088 1.2854164519839966 1.1770381710717728 0.9195409235667311 1.0269741887773827 1.2138941390528948 1.0534373176871734 1.0 12.961596409371698 AGTGYAS(ph)PDRTHVLAAGK ddPTM_A549_MK2206_60min_R1 3 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.154)GYAS(0.631)PDRT(0.215)HVLAAGK;AGT(0.009)GYAS(0.966)PDRT(0.025)HVLAAGK;AGT(0.224)GYAS(0.737)PDRT(0.039)HVLAAGK 96.90299999999999 8.365700000000001e-07 240972000.0 9412.0 9989.5 10049.5 9976.1 14124.8 10613.0 10520.099999999999 10225.1 15872.5 16291.5 15204.5 True False 11000.515498692941 10497.922881395682 11474.670213198982 12420.244947844154 12047.06063100942 11736.060615660765 12431.465995619932 11674.539238055446 12277.404093174082 12611.238835061862 11428.803027147665 0.9625256006742454 0.9185496378281438 1.0040132974505174 1.0867494100949544 1.0540964440802036 1.0268844941839708 1.0877312318788388 1.0215014827295619 1.0742510885882512 1.1034610365674753 1.0 13.48038669323089 -5.943734150500565 4.857836386599928 1.0422517529997113 0.9422026685083256 0.6239235979803017 0.03364570040274239 0.10161280184543622 4.990038695338911 0.004611858626702999 0.01492590445693404 1.1383238874226505e-06 5.943734150500565 -0.10004908449138572 AGTGYAS(ph)PDRTHVLAAGK ddPTM_A549_PD325901_60min_R1 2 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.02)GYAS(0.963)PDRT(0.017)HVLAAGK;AGT(0.041)GYAS(0.952)PDRT(0.008)HVLAAGK 88.79 2.8684e-06 317060000.0 6153.799999999999 5733.6 5348.700000000001 5886.7 6745.9 5977.2 5676.4 6042.1 6721.1 6684.5 7736.9 True False 6778.529245811877 6216.790594070948 5711.6949463459605 6250.308089334289 6272.091256091607 5928.523664934347 5892.418508245264 5921.585575564247 6438.635540254848 6262.439529216091 6785.3103482500055 0.9990006201499867 0.9162131538573347 0.8417735745600877 0.9211528682614056 0.9243632102559962 0.8737291826988235 0.868408106014631 0.872706666555271 0.9489080395438997 0.92294076583118 1.0 12.728199088167926 -9.25081914327504 1.471540007417975 0.9850763667270717 0.900606099858671 0.17177552140717056 0.04474640845337728 0.23900767037162465 1.0710789329464139 0.009218508950226498 0.00814017425083027 5.612816663842686e-10 9.25081914327504 -0.08447026686840065 AGTGYASPDRT(ph)HVLAAGK ddPTM_A549_MK2206_60min_R1 1 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.017)GYAS(0.36)PDRT(0.623)HVLAAGK 66.87100000000001 0.0010909000000000001 14154000.0 2322.5 2873.3 2774.0 2125.0 3381.5 2608.6 2906.7 3049.1 4693.4 3875.8 4698.3 True False 2714.48122032664 3019.5386971434223 3167.3949123253874 2645.6250953948743 2884.0858294459645 2884.640320551463 3434.809765065773 3481.319262477125 3630.3523938197036 3000.2540881399946 3531.582443516583 0.7686302850751766 0.855010111030201 0.8968769561475803 0.7491330409833178 0.8166553876550955 0.8168123969036029 0.972597927416796 0.9857675187133934 1.0279676184494704 0.8495494968970576 1.0 11.786099060751729 -7.835391638778815 3.3575680593777766 1.0106090969487844 0.818273274846254 0.5582282594477215 0.06180395563304293 0.06511049479281734 1.4779308147018055 0.006084215715800875 0.008709583255171172 1.4608592043144096e-08 7.835391638778815 -0.19233582210253042 AGTLSITEFADMLSGNAGGFRS(ph)R ddPTM_A549_MK2206_60min_R1 3 AGTLSITEFADMLSGNAGGFRSR 23 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AGTLSITEFADMLS(0.001)GNAGGFRS(0.999)R;AGTLSITEFADMLSGNAGGFRS(1)R;AGTLSITEFADMLSGNAGGFRS(1)R 242.07 7.0210999999999984e-99 450480000.0 66075.0 67861.0 65590.6 68297.0 105610.0 92929.0 98034.0 90602.0 135058.0 131293.0 128218.0 True False 77226.84462134905 71314.83504223372 74892.33335846056 85029.76806596894 90074.90890072085 102762.68509872208 115845.50882734988 103445.11095698804 104467.57864330798 101633.82011305133 96377.93196322255 0.8012917796453499 0.7399498369548663 0.7770693127866573 0.882253502787505 0.9346009720886426 1.0662470443745973 1.2019920584263635 1.0733277717191763 1.0839367116029466 1.0545341453459949 1.0 16.556415224221325 -6.760591004910753 1.6466715696561547 1.057813873994609 0.770062020818874 0.8605570796313666 0.053058150739459735 0.11846551452225372 0.6487952304991691 0.009488965601467622 0.023541600584678014 1.735437569810429e-07 6.760591004910753 -0.28775185317573504 AGTLSITEFADMLSGNAGGFRS(ph)R ddPTM_A549_PD325901_60min_R1 4 AGTLSITEFADMLSGNAGGFRSR 23 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AGTLSITEFADMLSGNAGGFRS(1)R;AGTLSITEFADMLSGNAGGFRS(1)R;AGTLSITEFADMLS(0.002)GNAGGFRS(0.998)R;AGTLSITEFADMLSGNAGGFRS(1)R 273.96 2.8640999999999994e-125 504354000.0 87068.0 93952.0 95954.0 101386.0 106701.0 108798.0 104444.0 107381.0 116336.0 111106.0 114521.0 True False 95907.07926392632 101869.6647645727 102466.01545827591 107648.38295568769 99206.68985846672 107911.98515986204 108418.6735739498 105239.20171623497 111446.80248933767 104090.74819853145 100435.6430084321 0.9549107905434968 1.014278016381298 1.0202156564047022 1.0718145444307061 0.9877637747600998 1.074439132637427 1.0794840389964693 1.04782723108966 1.1096339820314698 1.0363925104735228 1.0 16.615911824064195 -3.9464288893310733 0.6796860570187533 1.0538650528667761 0.44625460071134293 0.4173683655927972 0.03345595825213735 13.334894751676082 1.0898663970824418 0.0070022802948102765 9.446181479076264 0.00011312826085356059 3.9464288893310733 -0.6076104521554332 AGTLSITEFADMLSGNAGGFRSR ddPTM_A549_MK2206_60min_R1 1 AGTLSITEFADMLSGNAGGFRSR 23 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 76.693 2.8556e-05 33092000.0 9619.8 10252.0 10014.0 9339.3 16358.0 11916.0 12787.0 12278.0 17543.0 15564.0 18409.0 False True 11243.387058470711 10773.783010167537 11434.135779389482 11627.428919257105 13951.759869311561 13176.94321079936 15110.232382391037 14018.444099798022 13569.538510414424 12048.081590332547 13837.537237446888 0.8125280435050295 0.778591076236581 0.8263129184900501 0.8402816714950672 1.0082545491950379 0.9522607227491435 1.0919741080443133 1.0130736314740723 0.9806324837697845 0.8706810600464547 1.0 13.756299578919975 -6.694137157091514 3.8766226817149887 0.9984912587352741 0.8070126886661951 0.7226609557342383 0.05169274581097185 0.05695164061272683 1.6986757497128167 0.005010687097229078 0.010672979371162714 2.0223803779846055e-07 6.694137157091514 -0.19147857006907898 AGTPIRDSHS(ph)PDLQLPTPEVIPSSGSK ddPTM_A549_MK2206_60min_R1 3 AGTPIRDSHSPDLQLPTPEVIPSSGSK 27 1 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5 H3BPE1 MACF1 1 AGT(0.003)PIRDS(0.124)HS(0.873)PDLQLPTPEVIPSSGSK;AGT(0.003)PIRDS(0.174)HS(0.823)PDLQLPTPEVIPSSGSK;AGT(0.023)PIRDS(0.13)HS(0.847)PDLQLPTPEVIPSSGSK 166.88 1.7504e-42 35187300.0 1768.42 2838.87 3488.69 2508.91 3664.45 2956.25 2630.75 2803.99 4988.6 4443.96 5042.5 True False 2066.88606228204 2983.3563572058442 3983.4387010383775 3123.593062629249 3125.41425926756 3269.0784128000682 3108.7232220204314 3201.4641693592316 3858.6900651572373 3440.066349535737 3790.308084079851 0.5453081956486406 0.7871012833327755 1.0509538044597795 0.8241000449934517 0.8245805327527345 0.8624835607772716 0.8201769231049503 0.8446448410898584 1.0180412725194043 0.907595444281902 1.0 11.88809940306107 -3.1431547656514445 0.18650218202191177 1.036885196352158 4.210762057690204e-14 0.3207275721615427 0.10887721773308914 23.775670150338758 0.3697741540578156 0.11310266105025192 6.538716608353122 0.0007191926400646547 3.1431547656514445 -1.0368851963521157 AGTPIRDSHS(ph)PDLQLPTPEVIPSSGSK ddPTM_A549_PD325901_60min_R1 4 AGTPIRDSHSPDLQLPTPEVIPSSGSK 27 1 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5 H3BPE1 MACF1 1 AGT(0.023)PIRDS(0.13)HS(0.847)PDLQLPTPEVIPSSGSK;AGT(0.017)PIRDS(0.205)HS(0.778)PDLQLPTPEVIPSSGSK;AGT(0.007)PIRDS(0.024)HS(0.969)PDLQLPTPEVIPSSGSK;AGT(0.004)PIRDS(0.139)HS(0.857)PDLQLPTPEVIPSSGSK 140.52 7.0742e-27 64525800.0 5540.700000000001 5467.2 4803.3 5705.8 5742.9 6128.4 5314.1 6626.7 5959.1 5983.7 6974.4 True False 6103.187785152239 5927.940131140068 5129.280822589331 6058.234307188001 5339.538515929454 6078.492342264544 5516.330983487097 6494.525269954421 5708.659750328461 5605.8881608153715 6116.59301436426 0.9978083830033255 0.9691571953894663 0.8385846190099102 0.9904589520605329 0.8729595876969475 0.9937709322803986 0.9018633364247871 1.06178803374732 0.9333071101710045 0.9165050131094966 1.0 12.57851256994291 AGTQIENIDEDFRDGLK ddPTM_A549_MK2206_60min_R1 2 AGTQIENIDEDFRDGLK 17 1 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 ; 163.35 1.5196e-22 9395800.0 3104.6 3759.2 3433.8 2854.2 4873.799999999999 3860.0 3006.8 3471.2 5178.9 4956.799999999999 5206.4 False True 3628.5805798174765 3950.5272231585823 3920.7644736636294 3553.4791281299053 4156.870476283817 4268.462637939372 3553.096639350388 3963.2532301041615 4005.8874190038905 3837.0554373528876 3913.5071906699727 0.9271940494879433 1.0094595539716569 1.0018544192306478 0.9080037304138868 1.062185470412329 1.090700088175546 0.9079059948634248 1.0127113703924668 1.0236054832233752 0.9804646447311122 1.0 11.934246380345911 -3.491341925832501 0.751000663771164 1.0084892728554842 2.678711157346732e-16 0.10443600105391393 0.053387237525414806 47.98474970915147 2.1714876105183585 0.00792917047568083 71.41730247590915 0.00032259532856197896 3.491341925832501 -1.008489272855484 AGTQIENIDEDFRDGLK ddPTM_A549_PD325901_60min_R1 2 AGTQIENIDEDFRDGLK 17 1 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 ; 175.39 4.4151e-30 18694000.0 5861.2 6259.0 6540.0 6444.5 7049.3 6725.1 7089.6 7848.299999999999 6208.9 7487.6 7938.9 False True 6456.224709212608 6786.467895962413 6983.843728214814 6842.562128478575 6554.18148676479 6670.3330152998 7359.398607577981 7691.75949962776 5947.961525031363 7014.831658158186 6962.465628833507 0.9272899937165342 0.9747219243507302 1.0030704782645927 0.9827785863877907 0.9413592592288141 0.9580417873340867 1.0570104040586805 1.1047464949448431 0.8542895350749308 1.0075211903535748 1.0 12.765382585070398 -8.784765643122894 24.99998025000979 0.9311923061439953 0.9921347113411074 0.04274118744843758 0.06165932085492318 348.2726560351029 373260.3487191145 0.012263196227221138 0.013058973807140798 1.6414753180759269e-09 8.784765643122894 0.06094240519711214 AGTQIENIEEDFRDGLK ddPTM_A549_PD325901_60min_R1 2 AGTQIENIEEDFRDGLK 17 1 P12814-4;P12814-3;P12814;P12814-2;G3V2N5;G3V5M4;G3V380 P12814-4 ACTN1 Alpha-actinin-1 0 ; 86.455 2.2171999999999997e-05 4476100.0 2352.87 1884.74 2193.55 1993.62 2401.77 2534.93 2265.82 2336.6 2425.8999999999996 2088.83 2182.12 False True 2591.7316303086527 2043.5736542956058 2342.417493887709 2116.761379560472 2233.0779608566886 2514.286370533362 2352.0470200042796 2289.994679972761 2323.947859294494 1956.9409173180409 1913.7330735983787 1.3542806288211544 1.0678467558974087 1.2240042909867666 1.106090190300333 1.1668701302516802 1.3138124669632048 1.2290360930961717 1.1966113307886246 1.2143531882034055 1.0225777796892117 1.0 10.902173902233697 -10.63821483284544 0.7803506073234491 0.9915325938272221 1.2045890281931586 0.48728208739975976 0.07748870619566847 0.46554479490056966 0.4743779606509349 0.06081427514462031 0.014052749847322743 2.3003036426305558e-11 10.63821483284544 0.21305643436593646 AGVAPLQVK ddPTM_A549_MK2206_60min_R1 2 AGVAPLQVK 9 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 108.09 0.0012709000000000002 4084300.0 3977.3999999999996 4818.299999999999 5247.5 5170.9 5781.6 4497.200000000001 4381.200000000001 4626.4 6109.9 6070.7 6372.299999999999 False True 4648.687881906213 5063.53088937673 5991.674406066137 6437.7707321305215 4931.134298839208 4973.090719000243 5177.20732882863 5282.206367755784 4726.017405505396 4699.324653715739 4789.882043466937 0.9705224136462185 1.0571306022625402 1.2509022877167424 1.3440353381794004 1.0294897147968245 1.038249099637681 1.0808632199805375 1.1027842272150195 0.9866667618571844 0.9810940250867531 1.0 12.225774412982487 -8.11225233872893 0.8357601442861612 0.9929381216802041 1.137465486924778 0.21404518545522255 0.10037374986530258 0.5968479488940152 0.8333440691700055 0.022048178059456768 0.03221653608043875 7.722317638192309e-09 8.11225233872893 0.14452736524457388 AGVAPLQVK ddPTM_A549_PD325901_60min_R1 2 AGVAPLQVK 9 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 151.75 5.5768e-05 7887800.0 7821.6 7605.9 7426.0 8060.1 11039.3 10119.8 8421.2 8767.0 9742.0 9466.599999999999 8787.8 False True 8615.643074042413 8246.87588590837 7929.973016165627 8557.954071184757 10263.93765151753 10037.387704009001 8741.673374257456 8592.135307421546 9332.577618717578 8868.877260419937 7706.9563104539775 1.11790475084903 1.0700561354839948 1.0289370662980328 1.1104194349170575 1.3317757669905532 1.3023802522915495 1.1342575489107098 1.1148545497483724 1.2109290935071932 1.1507626231629067 1.0 12.911945497229597 -4.089538729512593 11.290423126678874 1.1253111904454467 1.145932466309712 0.0 0.10021307324105419 0.0 0.0 0.015527716816779877 0.0 8.136942939147473e-05 4.089538729512593 0.02062127586426521 AGVDY(ph)APNLPPFPSPADVK ddPTM_A549_MK2206_60min_R1 1 AGVDYAPNLPPFPSPADVK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 AGVDY(0.996)APNLPPFPS(0.004)PADVK 75.479 0.00047739 1368500.0 282.85 446.03 502.59 450.11 522.83 314.91 368.58 397.95 616.31 720.19 758.4 True False 330.5881649814381 468.7310218518364 573.8648193891913 560.3869702062059 445.92239958871323 348.2335671796599 435.54621502320254 454.36063117076264 476.7167690448334 557.4985788063219 570.0683492248206 0.5799096993035522 0.8222365309163667 1.0066596754047705 0.9830171609566125 0.7822262018143594 0.610862833646506 0.7640245518198978 0.797028341932336 0.8362449339505925 0.9779504151816337 1.0 9.154991093571642 -10.168045456852115 0.7594346711946047 0.9938031251639099 0.8021298695714855 0.26545443456863194 0.1222257718926885 0.7063175727486541 0.7910822748058214 0.07081063375266422 0.026665127105563263 6.791325452683043e-11 10.168045456852115 -0.19167325559242443 AGVDY(ph)APNLPPFPSPADVK ddPTM_A549_PD325901_60min_R1 1 AGVDYAPNLPPFPSPADVK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 AGVDY(0.999)APNLPPFPS(0.001)PADVK 82.069 2.549e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AGVDYAPNLPPFPS(ph)PADVK ddPTM_A549_PD325901_60min_R1 1 AGVDYAPNLPPFPSPADVK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 AGVDYAPNLPPFPS(1)PADVK 93.75399999999999 3.8277e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AGVLAGHDNR ddPTM_A549_MK2206_60min_R1 2 AGVLAGHDNR 10 0 Q9HAV0;P62879;B3KVK2;E7EP32;P62879-2;P62873-2;P62873 Q9HAV0;P62873-2 GNB4;GNB2;GNB1 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 0 ; 77.66199999999999 0.00149 7682300.0 1808.17 1855.47 1554.04 1507.1599999999999 2756.4 2270.3999999999996 1635.58 1814.6599999999999 2546.45 2265.7 2737.2 False True 2113.3448904878446 1949.9054976468549 1774.4262399243491 1876.4142676589836 2350.937211381 2510.6522210304524 1932.7437147095602 2071.8936121631764 1969.6831408450573 1753.8767964030098 2057.477697123126 1.0271532437230475 0.9477164687487577 0.8624279341668908 0.9119973792584412 1.1426307146212107 1.2202573201843108 0.9393752930649137 1.0070065960181283 0.9573290362268191 0.8524402470342075 1.0 11.006661076706676 -4.9020160357769464 16.431985815650883 0.9906775662489594 2.5141081579386086 0.010047921905168233 0.10595366397615398 374.3126942929379 67643.75898671552 0.013413430319190331 1634.0681515428128 1.2530949051355292e-05 4.9020160357769464 1.5234305916896491 AGVLAGHDNR ddPTM_A549_PD325901_60min_R1 2 AGVLAGHDNR 10 0 Q9HAV0;P62879;B3KVK2;E7EP32;P62879-2;P62873-2;P62873 Q9HAV0;P62873-2 GNB4;GNB2;GNB1 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 0 ; 88.49600000000001 0.00075518 10912400.0 2567.8999999999996 2668.4 2230.7 2324.3 2659.8 2760.2 2628.4 2366.5 2054.94 2529.1 2889.7 False True 2828.5913176119325 2893.2754327506136 2382.0887162888043 2467.866732131703 2472.9848238118648 2737.7218463413924 2728.425200315667 2319.298301016664 1968.5780180463444 2369.412194381093 2534.285219317561 1.1161298247138982 1.1416534377017449 0.9399449983495779 0.9737920236129762 0.9758115641292328 1.0802737692952389 1.0766054189632155 0.9151686176985284 0.776778400095175 0.9349429876007147 1.0 11.307363185359842 -8.340202127216621 5.813626579649482 0.8924920524119094 1.039222704839129 0.420626202025985 0.07665710674544882 0.20487262727444913 11.821617878369796 0.016403457338045685 0.019891166424717492 4.568755033596764e-09 8.340202127216621 0.1467306524272195 AGVLAHLEEER ddPTM_A549_MK2206_60min_R1 2 AGVLAHLEEER 11 0 P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35579;P35580-2;P35580-5 MYH9;MYH10 Myosin-9;Myosin-10 0 ; 126.67 9.8634e-07 9849700.0 710.97 811.8299999999999 642.1500000000001 677.5 918.38 771.22 658.8399999999999 938.1899999999999 891.55 1249.3200000000002 1005.72 False True 830.9643544523708 853.1486793937098 733.2165259371835 843.4875304141309 783.28751857063 852.8299885055966 778.5426998369059 1071.181305586374 689.6153485127966 967.0977443095771 755.9719675400665 1.0991999573163136 1.1285453906047025 0.9698990933791775 1.1157656191390801 1.0361330210688213 1.128123826179304 1.0298565730820477 1.416959029674075 0.9122234396558454 1.2792772560820134 1.0 9.562188928135427 AGVLAHLEEER ddPTM_A549_PD325901_60min_R1 2 AGVLAHLEEER 11 0 P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35579;P35580-2;P35580-5 MYH9;MYH10 Myosin-9;Myosin-10 0 ; 132.25 8.2631e-08 20603800.0 1404.92 1295.39 1367.25 1539.29 1557.8600000000001 1452.0700000000002 1598.88 1368.1399999999999 1855.87 1758.2 1603.77 False True 1547.5464441525598 1404.5570614716012 1460.0398069421567 1634.368447318766 1448.4412879252404 1440.2448233522741 1659.726253340708 1340.8513744149323 1777.8742378617712 1647.1869519437114 1406.5164571356622 1.1002689917358677 0.9986069159346693 1.03805383828604 1.1619973865411564 1.0298075650497238 1.0239800722170709 1.1800261880480953 0.9533136762192919 1.264026616142388 1.1711110407468455 1.0 10.457910717861521 -7.741779589683632 24.99344059229366 1.1160412025169497 1.0584822805105152 0.08568111157806924 0.0891621613813215 603.1775342062821 766816.5974283887 0.016803709046975795 0.024905016736677135 1.8122596054985256e-08 7.741779589683632 -0.05755892200643453 AGVLT(ph)PPDLGPHPPPPAPR ddPTM_A549_MK2206_60min_R1 1 AGVLTPPDLGPHPPPPAPR 19 0 I3L2J0 I3L2J0 CIC 1 AGVLT(1)PPDLGPHPPPPAPR 88.09 5.692899999999999e-06 8095200.0 1474.7 1514.2 1475.0 1722.3 2703.2 2146.6 1930.3 2248.5 3679.2 2580.5 2472.6 True False 1723.5933070465871 1591.2663123288805 1684.1771794087765 2144.263577316986 2305.5628609073883 2373.7517872022427 2281.0105237920893 2567.231760742453 2845.867074475106 1997.563257764915 1858.5851797116181 0.9273684767646879 0.8561707742530179 0.9061608786044968 1.1537074548553616 1.2404935141391389 1.2771821346227235 1.2272832844529706 1.3812828105843338 1.5312007787109745 1.0747762758308774 1.0 10.859989093675038 -6.382493957701275 2.3189542795687133 1.2661450104242338 0.88269999281548 0.5661136124203043 0.13354962504444992 0.2285642645430481 2.377119174860657 0.027660771444569226 0.07709406497318567 4.144823506522099e-07 6.382493957701275 -0.3834450176087538 AGVLT(ph)PPDLGPHPPPPAPR ddPTM_A549_PD325901_60min_R1 1 AGVLTPPDLGPHPPPPAPR 19 0 I3L2J0 I3L2J0 CIC 1 AGVLT(1)PPDLGPHPPPPAPR 102.61 1.8994e-09 12217000.0 2616.2 3171.1 2771.6 3255.5 3654.7 4371.5 3276.7 2872.4 3844.4 2746.7 3019.9 True False 2881.794698055354 3438.339725976419 2959.697442984737 3456.5848412230594 3398.006480030538 4335.8999533662045 3401.396611579039 2815.1077286457926 3682.83323726112 2573.272893245245 2648.4714447233614 1.0880973264019327 1.298235528582624 1.1175115551581427 1.3051244513546594 1.2830066515538616 1.6371329817449094 1.2842866848180507 1.0629179084616625 1.3905504794467587 0.9716068105518234 1.0 11.370944238538812 -10.938013425688988 1.096974386400003 0.9937235244269009 1.2862163315101172 0.3436405932989155 0.1519999262013571 0.5176105230112219 1.0663689848068352 0.12009142073995525 0.025737705220177907 1.1534176007589254e-11 10.938013425688988 0.29249280708321623 AGVNS(ph)DSPNNCSGK ddPTM_A549_MK2206_60min_R1 1 AGVNSDSPNNCSGK 14 0 F8WE62;Q9Y4C1 F8WE62 KDM3A Lysine-specific demethylase 3A 1 AGVNS(0.5)DS(0.5)PNNCSGK 70.622 0.0022668000000000002 1501200.0 466.63 630.39 580.92 551.96 1014.3 660.02 716.83 800.84 1000.4 1187.1 910.99 True False 545.3857359918283 662.4741583866087 663.3031912285737 687.1902247784261 865.0978136350857 729.8628783141825 847.0687322021878 914.3615224696407 773.8109973105278 918.9332855232436 684.7660409550627 0.7964555824514358 0.967445987044914 0.9686566674706091 1.0035401636155648 1.2633480077786992 1.0658572923625445 1.237019188365061 1.3352904025356669 1.1300370506564132 1.3419667894768572 1.0 9.419467346886846 -5.6815763576579705 1.1027833948924057 1.107251003335786 0.7815861508055217 0.4272881066189528 0.1265695720510321 0.7740379785286545 1.1699214146816472 0.01823646374559863 0.2449651067099238 2.0817263639027e-06 5.6815763576579705 -0.32566485253026434 AGVNS(ph)DSPNNCSGKK ddPTM_A549_PD325901_60min_R1 1 AGVNSDSPNNCSGKK 15 1 F8WE62;Q9Y4C1 F8WE62 KDM3A Lysine-specific demethylase 3A 1 AGVNS(0.596)DS(0.4)PNNCS(0.004)GKK 40.961999999999996 0.041007 2452400.0 1165.0 954.03 1113.0 877.52 1277.1 1034.8 1175.7 944.39 1059.4 1003.9 1116.9 True False 1283.2699423723293 1034.4294562685768 1188.5348730127055 931.722417407483 1187.4009017558205 1026.3729318868466 1220.441906867726 925.5534005903767 1014.8771021627391 940.513582673354 979.5283806124455 1.3100895979858906 1.0560484787809872 1.2133746163327903 0.9511949177265573 1.2122169456829865 1.0478235773476126 1.2459484901342526 0.9448969717566312 1.036087490929249 0.9601698136457285 1.0 9.935943483161582 -2.0000000000266716 0.1634613925545012 0.9821995651211411 1.880862912520979 0.32575824907168605 0.10327875722092203 50.47695670216003 0.4999681666223499 0.12813841205789891 11.088643135639959 0.009999999999385865 2.0000000000266716 0.8986633473998379 AGVNSDS(ph)PNNCSGK ddPTM_A549_PD325901_60min_R1 1 AGVNSDSPNNCSGK 14 0 F8WE62;Q9Y4C1 F8WE62 KDM3A Lysine-specific demethylase 3A 1 AGVNS(0.239)DS(0.761)PNNCSGK 64.104 0.0040524 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AGVNSDS(ph)PNNCSGKK ddPTM_A549_PD325901_60min_R1 1 AGVNSDSPNNCSGKK 15 1 F8WE62;Q9Y4C1 F8WE62 KDM3A Lysine-specific demethylase 3A 1 AGVNS(0.124)DS(0.862)PNNCS(0.014)GKK 41.348 0.039031 2633100.0 1180.1 1060.9 1160.8 1008.1 1228.7 1273.8 1293.9 1110.3 911.82 1242.5 1056.7 True False 1299.902883256297 1150.3057662288745 1239.5788684574557 1070.3680474387859 1142.400350784885 1263.4265951270447 1343.1400725492472 1088.1541954865002 873.4993763394646 1164.0483379536236 926.732598973203 1.4026730954501412 1.2412488429816595 1.3375798691347198 1.1549912548935124 1.2327184260601565 1.3633129950612404 1.4493286132778898 1.1741835743041178 0.9425581632795484 1.2560779012666228 1.0 9.856009310948636 -8.596441493456133 4.134420472486729 0.9734587505862038 1.303782736861047 0.40747008880491364 0.11657592384055435 0.07238207658961769 2.4350421419035357 0.013952813714412544 0.015921333259850023 2.532552788431319e-09 8.596441493456133 0.3303239862748433 AGVVNGTGAPGQS(ph)PGAGR ddPTM_A549_MK2206_60min_R1 2 AGVVNGTGAPGQSPGAGR 18 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;Q13330-2 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 AGVVNGTGAPGQS(1)PGAGR;AGVVNGTGAPGQS(1)PGAGR 161.99 7.0214e-23 16272200.0 3119.2 3321.6 3063.9 3569.7 4033.2 3607.0 3215.5 3371.8 5009.200000000001 5110.200000000001 5368.0 True False 3645.6447028817474 3490.6552522993043 3498.407091519018 4444.276660249924 3439.921622747731 3988.6903458671795 3799.7147278938296 3849.7629757044288 3874.624198048679 3955.802270811962 4034.977450736863 0.9035105517667723 0.8650990730225382 0.867020233503447 1.1014377935218238 0.8525256125333579 0.9885285344379731 0.9416941666427231 0.9540977670151266 0.9602591948416216 0.9803777887506058 1.0 11.978344895760928 -2.0000000000000093 0.19857282096801032 0.9929723108150806 0.4544790067393157 0.19193030544586864 0.0627927035446976 52.713141699794484 0.5837141036616169 0.04741167986543967 8.924943785042526 0.009999999999999785 2.0000000000000093 -0.5384933040757649 AGVVNGTGAPGQS(ph)PGAGR ddPTM_A549_PD325901_60min_R1 2 AGVVNGTGAPGQSPGAGR 18 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;Q13330-2 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 AGVVNGTGAPGQS(1)PGAGR;AGVVNGTGAPGQS(1)PGAGR 158.98 1.0905e-22 28980000.0 7471.6 6458.7 6345.1 6476.4 6790.8 6386.299999999999 6185.5 6722.2 6990.9 6915.200000000001 8989.0 True False 8230.111331698788 7002.997315809624 6775.7166421859065 6876.432519028417 6313.8376349882 6334.292090171014 6420.892587335476 6588.120447536115 6697.096784509617 6478.573091844583 7883.40998596586 1.0439786014364507 0.8883208317563647 0.8594905826600567 0.8722662567683178 0.8009018491018695 0.8034964693511305 0.8144816264492174 0.8356942565798766 0.8495177589941241 0.8217983212059016 1.0 12.944604090194467 -10.604670563812842 0.8868710020909633 1.0000240318721332 0.8585079390428928 0.0 0.08190852943781415 0.48591137294838355 0.6819618416023983 0.04383477768317286 0.011971622994677888 2.4850174125496854e-11 10.604670563812842 -0.14151609282924038 AGYLRS(ph)PSWTR ddPTM_A549_MK2206_60min_R1 1 AGYLRSPSWTR 11 1 D3DX86;H3BLZ2;Q9H9R9;Q9H9R9-2;Q9H9R9-3 D3DX86 MGC3101;DBNDD1 Dysbindin domain-containing protein 1 1 AGY(0.002)LRS(0.991)PS(0.007)WTR 78.486 0.00029229 13810000.0 1201.2 1137.0 897.67 642.98 899.83 1017.0 925.59 711.23 1219.9 1205.9 1258.3 True False 1403.9331934795955 1194.8684434803445 1024.973104162628 800.5101288644687 767.4661989975933 1124.6182649700363 1093.757721968978 812.0490305505248 943.5945977800009 933.4863524660764 945.8293826866976 1.4843408538352028 1.2633023094358025 1.083676530804231 0.8463578564144001 0.8114213969728339 1.189028682715984 1.1564006595587877 0.8585576272158516 0.9976372219476322 0.9869500456989823 1.0 9.88543615034602 -5.586380013304758 2.1005275874957965 0.9918642822197554 1.4880139958828784 0.6546207467235841 0.1132815253124517 0.1809952672366584 1.33712338499359 0.015859009698209664 0.1314051213478269 2.5919104143528307e-06 5.586380013304758 0.496149713663123 AGYLRS(ph)PSWTR ddPTM_A549_PD325901_60min_R1 1 AGYLRSPSWTR 11 1 D3DX86;H3BLZ2;Q9H9R9;Q9H9R9-2;Q9H9R9-3 D3DX86 MGC3101;DBNDD1 Dysbindin domain-containing protein 1 1 AGYLRS(0.998)PS(0.002)WTR 105.0 5.1145e-05 12446000.0 2742.2 1977.4 2505.6 1991.6 2375.1 2759.9 2169.6 2051.8 3448.5 3078.3 3803.7 True False 3020.5861252990567 2144.0424376859046 2675.645083396794 2114.616608748224 2208.2811696501835 2737.4242894419276 2252.1653152506756 2010.875239394039 3303.5715374817846 2883.935612654035 3335.8690136409346 0.9054870299005648 0.6427238086743068 0.8020833769118713 0.6339027701930734 0.6619807794071491 0.8206030507337474 0.6751360158451034 0.6028040163361418 0.9903181221963212 0.86452303758365 1.0 11.703846925638693 -8.777179682735943 24.82496694332678 0.9954280511523554 0.715686421534399 0.528518467519177 0.09580403303304935 82.10142262211973 129486.54393364389 0.013963197513247863 0.014889740151426264 1.6703993689935561e-09 8.777179682735943 -0.27974162961795646 AHAWPS(ph)PYK ddPTM_A549_MK2206_60min_R1 1 AHAWPSPYK 9 0 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.998)PY(0.002)K 71.03 0.0010107 6513400.0 2816.9 3155.2 2460.8 2431.2 3879.7 3110.5 2606.6 3437.0 4370.5 3922.0 4034.4 True False 3292.3238534071547 3315.7862030511687 2809.7784427722845 3026.8441091407144 3309.001269407513 3439.6510454172067 3080.185479623095 3924.2052753710545 3380.588728254361 3036.017476052704 3032.5471362244434 1.085662878601167 1.0933997244241886 0.9265407317857857 0.9981193937546411 1.091162353218113 1.1342448743268712 1.015709019929023 1.2940294409592379 1.1147687328162137 1.0011443646783942 1.0 11.566314354630707 -6.770144202476992 24.78655293891004 1.0791395710404263 1.0236506163481878 0.10519637247318536 0.0883127862547824 375.477751290568 1069155.40864692 0.013552591202666709 0.025897183364276703 1.6976798638360178e-07 6.770144202476992 -0.05548895469223858 AHAWPS(ph)PYK ddPTM_A549_PD325901_60min_R1 1 AHAWPSPYK 9 0 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.997)PY(0.003)K 73.781 0.00067786 6689600.0 1110.4 1432.3 1115.5 1402.4 1063.6 1416.0 1118.0 937.84 1754.0 1266.0 1831.1 True False 1223.1269905667245 1553.0049476572867 1191.2045380464263 1489.0230629185126 988.8964052208053 1404.468565473303 1160.5461017930747 919.1340454787531 1680.2854796993036 1186.0645439430887 1605.8863082992648 0.7616522939672444 0.9670702960921419 0.7417738926412464 0.9272281949370887 0.6157947795620159 0.8745753408662684 0.7226826057332579 0.5723531240839672 1.046329040241231 0.7385731715959433 1.0 10.649154042860502 -8.795807481210662 24.99991470973522 1.021877685255834 0.7799504803776037 0.10488790428117922 0.14209859369364958 104.80729486413532 76238.0662125011 0.01876125827012842 0.01997334831394738 1.6002672553091521e-09 8.795807481210662 -0.24192720487823027 AHAWPS(ph)PYKDYEVK ddPTM_A549_MK2206_60min_R1 4 AHAWPSPYKDYEVK 14 1 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.999)PY(0.001)KDYEVK;AHAWPS(1)PYKDYEVK;AHAWPS(0.999)PY(0.001)KDYEVK;AHAWPS(1)PYKDYEVK 133.78 1.8100000000000002e-09 750740000.0 42113.5 36827.5 30768.2 23450.800000000003 64964.7 47326.0 44069.100000000006 48402.5 62015.2 56362.3 59943.5 True False 49221.22922377871 38701.86244702934 35131.593417956 29196.2470527464 55408.478688217685 52334.00590754368 52075.88503033 55263.702601439414 47968.85621792469 43630.01728468264 45057.87459356282 1.0924001557501493 0.8589367074264633 0.7796993030597823 0.6479721317551342 1.2297179835493972 1.1614841219124075 1.1557554700498414 1.2265048695691174 1.0646053914131526 0.9683105933921666 1.0 15.459491641954447 -6.767509039470719 24.99998874983955 1.077442855877742 0.8411186346941444 0.49290908152929036 0.1283507335255284 108.91539475518114 448607.76371288416 0.01936866652492472 0.03727926672289942 1.7080121688673435e-07 6.767509039470719 -0.23632422118359764 AHAWPS(ph)PYKDYEVK ddPTM_A549_PD325901_60min_R1 4 AHAWPSPYKDYEVK 14 1 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.999)PY(0.001)KDYEVK;AHAWPS(1)PYKDYEVK;AHAWPS(0.99)PY(0.01)KDYEVK;AHAWPS(1)PYKDYEVK 139.46 2.9293e-10 898800000.0 70285.7 58186.7 61229.0 58889.100000000006 57550.8 59127.5 55177.6 47959.0 77009.0 64027.8 84757.9 True False 77421.05252240224 63090.29741524143 65384.36813988758 62526.54596015021 53508.63034748175 58645.98524366012 57277.41376234127 47002.42012189234 73772.57953601134 59985.07378094726 74333.21562459636 1.0415404724773423 0.8487497397376857 0.8796117266081562 0.8411656274353426 0.7198481849314226 0.7889606920792831 0.7705493873910731 0.6323205545051055 0.992457798524197 0.806975364605357 1.0 16.181719399314883 -8.93491377676878 24.99593888751776 0.9966727328574917 0.813808945937123 0.11603358590956958 0.11217378944298254 40.068585284998484 15387.826049027874 0.016738394313402502 0.01781926630520298 1.161679226473724e-09 8.93491377676878 -0.18286378692036864 AHAWPS(ph)PYKDYEVKK ddPTM_A549_MK2206_60min_R1 4 AHAWPSPYKDYEVKK 15 2 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.994)PY(0.005)KDY(0.001)EVKK;AHAWPS(0.84)PY(0.139)KDY(0.021)EVKK;AHAWPS(0.588)PY(0.376)KDY(0.037)EVKK;AHAWPS(0.994)PY(0.005)KDY(0.001)EVKK 57.136 0.0027948 16248200.0 6505.69 8267.6 6896.4 5616.11 11550.7 8116.0 7361.200000000001 7192.53 13067.1 10720.2 12070.8 True False 7603.691423150406 8688.385526225238 7874.413220389621 6992.057202116762 9851.60733111977 8974.829733035218 8698.634755083835 8212.09315369932 10107.42271387085 8298.499374497746 9073.287222867833 0.838030499462914 0.957578583462837 0.8678677338179448 0.7706200663960412 1.0857814912207673 0.9891486417861358 0.958708188269435 0.905084667991331 1.113975835394766 0.9146078119937222 1.0 13.14740961390948 -7.218079721890691 0.6862192644773228 1.0453434133488688 0.8663801683439926 0.12719755014457135 0.09084282862608846 0.5999652181541367 0.5389110472966102 0.01717655378055499 0.0502771773967127 6.052297646846621e-08 7.218079721890691 -0.17896324500487626 AHAWPS(ph)PYKDYEVKK ddPTM_A549_PD325901_60min_R1 1 AHAWPSPYKDYEVKK 15 2 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.999)PY(0.001)KDYEVKK 46.621 0.0062446 4011900.0 4253.4 3254.2 3230.3 4150.7 4615.2 4724.4 3264.7 3721.6 5504.7 4293.3 4998.2 True False 4685.202036812412 3528.4428546158915 3449.5275833719143 4407.079312076347 4291.04427357565 4685.926052769827 3388.9399450123865 3647.3697684612803 5273.3566021099 4022.220305300839 4383.453086200307 1.0688381841160914 0.8049459604629736 0.786942968371553 1.0053898662564495 0.9789187175481421 1.0690033543467696 0.7731210710754999 0.8320768345721973 1.2030142671564408 0.9175917310403808 1.0 12.097852092301922 -8.756345362380772 24.99966908391506 1.0958678491815368 0.9125344264857613 0.1293697818668007 0.12345549270694343 111.19794553248413 545720.5752002072 0.021051064336305905 0.023514470840961543 1.7524863244096061e-09 8.756345362380772 -0.18333342269577546 AHDEAVRS(ph)EKK ddPTM_A549_MK2206_60min_R1 1 AHDEAVRSEKK 11 2 B5MCF9;O00541;B3KXD6;O00541-2;H7C267 B5MCF9 PES1 Pescadillo homolog 1 AHDEAVRS(1)EKK 71.87899999999999 0.00046815 8775900.0 1740.3 1788.8 1592.0 937.97 1653.1 1822.5 1470.0 1222.4 1686.9 2261.9 2775.9 True False 2034.0200937500347 1879.8422794174478 1817.7695387245924 1167.772692107074 1409.9311798483286 2015.355740322411 1737.0799720117964 1395.678943442995 1304.8198434257602 1750.9352190422262 2086.5674190574623 0.9748163779288933 0.9009257320171348 0.8711769972645838 0.5596620945200882 0.6757180079449425 0.9658713741599498 0.832506036539411 0.6688875378268135 0.6253427670289078 0.8391462471091172 1.0 11.026915820920467 -11.068823097234274 1.4116553510757788 0.9988734864305913 0.7655503476235183 0.06736971078794651 0.14134481799870566 0.4710429083878247 1.688501478867766 0.10216199123904826 0.023064777945763608 8.53447681202096e-12 11.068823097234274 -0.233323138807073 AHEDRPS(ph)SR ddPTM_A549_MK2206_60min_R1 1 AHEDRPSSR 9 1 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 AHEDRPS(0.581)S(0.419)R 48.004 0.0092662 8380700.0 306.97 392.41 349.84 163.5 506.54 338.53 264.46 337.84 518.86 543.27 720.39 True False 358.77903130405565 412.3819928813734 399.45257250465494 203.55750733979397 432.0286370094807 374.3530199019727 312.5089587743127 385.7298545916078 401.339038449161 420.5449296825986 541.497281247453 0.6625684813735955 0.7615587504546 0.7376815846322107 0.375916028370182 0.7978408238988971 0.6913294542117953 0.577120088312138 0.7123394113872519 0.7411653804144539 0.7766335016748096 1.0 9.080810284135264 -10.127705702667024 0.5444729327080485 1.0171270183379122 0.6563662062643636 0.2628718001946373 0.12481314983769114 0.5188009492620772 0.28377863276785903 0.08768155758599085 0.026305294211207978 7.452368085750832e-11 10.127705702667024 -0.3607608120735486 AHEDRPS(ph)SR ddPTM_A549_PD325901_60min_R1 2 AHEDRPSSR 9 1 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 AHEDRPS(0.5)S(0.5)R;AHEDRPS(0.581)S(0.419)R 48.004 0.0092662 30459000.0 2086.5299999999997 2552.7 1852.4699999999998 2434.5 2383.6 1647.9699999999998 1615.3400000000001 1629.3 1696.81 2732.3 3183.2 True False 2298.352989577798 2767.8249877014287 1978.1897540070486 2584.8735358493445 2216.1841589735936 1634.5494787027114 1676.8126476479645 1596.8023333388755 1625.4989765157227 2559.7821117027656 2791.6865799673537 0.823284750541257 0.9914526249339193 0.7086002304851076 0.9259182439740683 0.793851349530616 0.5855060845411328 0.6006450221455638 0.5719848154865396 0.5822641367336915 0.9169303352572981 1.0 11.44692126528265 -6.993859308085032 23.58330375995863 0.7461429948088871 0.8604744195905447 0.1658567226817601 0.1488317991103935 184.67355512593454 709220.5024131831 0.02794632530217314 0.052690233488972144 1.0142399007164121e-07 6.993859308085032 0.11433142478165759 AHEEQDEES(ph)QDNLFSSDR ddPTM_A549_MK2206_60min_R1 4 AHEEQDEESQDNLFSSDR 18 0 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 AHEEQDEES(1)QDNLFSSDR;AHEEQDEES(1)QDNLFSSDR;AHEEQDEES(1)QDNLFSSDR;AHEEQDEES(1)QDNLFSSDR 154.12 1.7162999999999999e-22 38962000.0 1568.43 1813.77 1930.27 1338.4099999999999 2404.38 2170.72 1541.09 1560.25 2797.37 2314.97 2567.66 True False 1833.1426395680999 1906.0831457619552 2204.011311252461 1666.3205100835073 2050.698887062927 2400.424149592681 1821.0861048079314 1781.4202155652272 2163.7701614819593 1792.0166691835082 1930.0391581890856 0.9497955685459244 0.9875878101615265 1.1419516033656216 0.8633609857154299 1.062516725819726 1.243717848629013 0.9435487860860904 0.9229969288481668 1.1211016897253931 0.9284872079304956 1.0 10.914414403011458 -5.535957699052305 24.26351536345561 1.0464482256467944 0.9592435450741376 0.014039080444638863 0.10845128529367948 256.8215540450687 476445.70458674023 0.013862652607298433 0.05376074446314197 2.9110006401794286e-06 5.535957699052305 -0.08720468057265685 AHEEQDEES(ph)QDNLFSSDR ddPTM_A549_PD325901_60min_R1 4 AHEEQDEESQDNLFSSDR 18 0 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 AHEEQDEES(1)QDNLFSSDR;AHEEQDEES(1)QDNLFSSDR;AHEEQDEES(1)QDNLFSSDR;AHEEQDEES(1)QDNLFSSDR 225.6 4.755299999999999e-64 48215200.0 2993.38 3047.33 3148.6300000000006 2813.44 3219.1 2922.25 2552.93 3072.95 3070.0599999999995 2908.2599999999998 3394.97 True False 3297.2657339901125 3304.139193705567 3362.314966050307 2987.2197990141626 2993.0015212921194 2898.4521648688997 2650.0831481669 3011.657601567362 2941.036054621236 2724.631967273244 2977.410212487986 1.1074274280918948 1.109735964445611 1.1292750162365723 1.0032946708132566 1.005236533662288 0.9734809643333938 0.8900631619559186 1.011502408682463 0.9877832897481885 0.9151013037590425 1.0 11.539842287142255 -6.320484345264163 4.629157005836917 0.9871299719314963 1.1151925270608212 0.7236083302321941 0.03850472846477178 0.07681239973859459 3.421193679105329 0.004610365631199405 0.011237606622237203 4.780965994813138e-07 6.320484345264163 0.12806255512932485 AHFNAMFQPS(ph)SPTR ddPTM_A549_MK2206_60min_R1 3 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.5)S(0.5)PTR;AHFNAMFQPS(0.475)S(0.475)PT(0.05)R;AHFNAMFQPS(0.577)S(0.379)PT(0.044)R 103.5 7.7748e-06 52686400.0 2990.16 3444.62 3982.05 3156.29 5073.799999999999 4087.1900000000005 4029.73 3838.79 6129.4 5003.2 5490.0 True False 3494.8259056068514 3619.936444838401 4546.764567637097 3929.581191691241 4327.4507412222165 4519.693732942854 4761.879779329998 4382.950238301323 4741.100686640497 3872.973645126689 4126.681483708155 0.846885304670151 0.8772027739794439 1.1017968276900945 0.9522375805365518 1.0486515032252148 1.0952368751468422 1.1539247208997256 1.0621004445351305 1.14888941764903 0.938520130622369 1.0 12.010766373453306 -5.304575999466219 0.8574137052707937 1.076755858469583 0.6957324182269443 0.4687656190450461 0.07337475580996437 1.2227266910427905 0.6801234421093316 0.01085872487363377 0.4315595205645128 4.959341336902005e-06 5.304575999466219 -0.3810234402426388 AHFNAMFQPS(ph)SPTR ddPTM_A549_PD325901_60min_R1 2 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.489)S(0.489)PT(0.023)R;AHFNAMFQPS(0.556)S(0.364)PT(0.08)R 74.428 0.00028433 8606900.0 1813.0 1967.63 2085.3999999999996 2513.6 2122.82 2098.2 1866.37 2296.33 2404.8999999999996 1950.21 2343.4 True False 1997.054425339942 2133.4490854980854 2226.927784528926 2668.85936320021 1973.720446531431 2081.112954855993 1937.3957316668518 2250.5278967139643 2303.830416265028 1827.0734077750794 2055.1766560365327 0.9717191071989495 1.038085499478426 1.0835700074676893 1.2986033854370367 0.9603653490001233 1.0126199851206363 0.9426906081169564 1.0950532598273923 1.120988996005838 0.8890103935389394 1.0 11.00504669308683 AHFNAMFQPSS(ph)PTR ddPTM_A549_MK2206_60min_R1 7 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.347)S(0.65)PT(0.002)R;AHFNAMFQPS(0.016)S(0.984)PTR;AHFNAMFQPS(0.178)S(0.644)PT(0.178)R;AHFNAMFQPS(0.061)S(0.808)PT(0.131)R;AHFNAMFQPS(0.135)S(0.852)PT(0.014)R;AHFNAMFQPS(0.041)S(0.857)PT(0.101)R;AHFNAMFQPS(0.019)S(0.981)PTR 143.25 5.4768e-13 151129500.0 10309.95 13484.5 13827.220000000001 12692.77 16902.0 13130.0 12650.71 11426.5 18080.6 16997.2 18185.0 True False 12050.017505923202 14170.803453043716 15788.127714348893 15802.499219800095 14415.738189944006 14519.407885011391 14949.180253557386 13046.241367188624 13985.372968785221 13157.520714931916 13669.162619532392 0.8815476003412579 1.0366987245286343 1.1550179154199711 1.1560692969750244 1.0546175059286225 1.0622017082644148 1.0936427248437244 0.954428718884824 1.023133117810815 0.962569623404043 1.0 13.738637244903725 -8.244485679242477 24.629158466569464 1.0069920549911633 1.0686150608089602 0.18842398009210248 0.07200739476291314 1017.5562974248944 1478237.8663303743 0.011420354694027605 0.01472374959514804 5.695270038361569e-09 8.244485679242477 0.061623005817796894 AHFNAMFQPSS(ph)PTR ddPTM_A549_PD325901_60min_R1 11 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.426)S(0.497)PT(0.077)R;AHFNAMFQPS(0.134)S(0.764)PT(0.102)R;AHFNAMFQPS(0.019)S(0.962)PT(0.019)R;AHFNAMFQPS(0.088)S(0.762)PT(0.149)R;AHFNAMFQPS(0.028)S(0.944)PT(0.028)R;AHFNAMFQPS(0.166)S(0.668)PT(0.166)R;AHFNAMFQPS(0.044)S(0.955)PT(0.001)R;AHFNAMFQPS(0.008)S(0.985)PT(0.008)R;AHFNAMFQPS(0.203)S(0.671)PT(0.126)R;AHFNAMFQPS(0.033)S(0.844)PT(0.123)R;AHFNAMFQPS(0.021)S(0.979)PTR 191.48 1.3563999999999997e-26 364172600.0 28863.100000000002 28145.399999999998 31328.199999999993 32347.8 38534.899999999994 34413.5 34409.6 35410.5 35492.100000000006 33062.799999999996 36851.9 True False 31793.260664108824 30517.31163428988 33454.32004377053 34345.85013881594 35828.34156218807 34133.247865759564 35719.076157655625 34704.209798500146 34000.49046410243 30975.20916546724 32319.349923441478 0.9837221583794581 0.9442427433280591 1.03511735610455 1.0627023817055377 1.108572469652352 1.056124208767035 1.105191665125303 1.0737904654860928 1.052016533273202 0.958410649930823 1.0 14.980110559332868 -5.8232067964119585 6.419488094690167 1.044664116451954 0.9642290236923287 0.3810136757468757 0.04196953107780796 0.14924489960096748 11.682547654324319 0.005768769647771918 0.018536932274247325 1.5024263908682886e-06 5.8232067964119585 -0.08043509275962524 AHGCFQDGRS(ph)PGPPPPVGVK ddPTM_A549_MK2206_60min_R1 2 AHGCFQDGRSPGPPPPVGVK 20 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 AHGCFQDGRS(1)PGPPPPVGVK;AHGCFQDGRS(1)PGPPPPVGVK 75.112 0.00015611 5990800.0 1514.49 1933.8600000000001 1774.05 1639.52 2641.8 1819.2600000000002 1555.56 1565.3400000000001 2705.3 2784.6 2889.2 True False 1770.098886274487 2032.2852138160933 2025.6369661899264 2041.2024736008486 2253.1947195712974 2011.7728856729473 1838.1851165052178 1787.2317386526988 2092.5538694763804 2155.5569260113093 2171.7319021365397 0.815063261046666 0.9357900999735468 0.9327288346213979 0.9398961591864646 1.0375105312744244 0.9263449524749231 0.8464143823170899 0.8229522883991475 0.963541525276548 0.9925520382560492 1.0 11.084630299714538 -8.977643532715405 18.097369197996652 0.9839171486609706 0.9117273614975098 0.2553644090173137 0.06005497896505501 8.323871125561627 6738.935518012297 0.011163938032130016 0.011509491811303616 1.0528256746440868e-09 8.977643532715405 -0.0721897871634608 AHGCFQDGRS(ph)PGPPPPVGVK ddPTM_A549_PD325901_60min_R1 1 AHGCFQDGRSPGPPPPVGVK 20 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 AHGCFQDGRS(1)PGPPPPVGVK 59.81399999999999 0.0011157 2942800.0 1310.3 1283.2 1417.2 1365.3 1455.4 1373.9 1253.4 1826.2 1799.0 927.29 1568.8 True False 1443.3206914081222 1391.3397673907916 1513.379714315908 1449.6314801787264 1353.1777248574288 1362.7114139150929 1301.0988228867975 1789.7750083738138 1723.3942861910202 868.7407511476983 1375.8475454425675 1.049041150081676 1.0112601298011117 1.099961779434727 1.0536279873308383 0.9835230141157489 0.990452334947293 0.9456707810372074 1.300852710245668 1.2526055607684772 0.6314222487988315 1.0 10.426104901781061 -8.225523900458636 24.992370517527235 1.1362365240015253 1.0207475772321204 0.0 0.17326403134361354 745.7895280843954 518970.48868761037 0.01795015339018367 0.02317330186774261 5.949440143994182e-09 8.225523900458636 -0.11548894676940491 AHGS(ph)FSHVR ddPTM_A549_MK2206_60min_R1 3 AHGSFSHVR 9 0 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AHGS(0.999)FS(0.001)HVR;AHGS(0.997)FS(0.003)HVR;AHGS(0.991)FS(0.009)HVR 84.507 0.00041429 20226900.0 2795.62 3384.1499999999996 2492.3199999999997 2065.33 3549.88 3297.3100000000004 2188.08 3411.3500000000004 4370.719999999999 4417.71 4822.1 True False 3267.4523096532034 3556.3887801266537 2845.7684527349707 2571.3359427161868 3027.6973544976 3646.2291556227624 2585.6258130337214 3894.919309321224 3380.7588986056294 3419.7462427671553 3624.639486810403 0.901455805892708 0.981170346200745 0.7851176546220269 0.7094046048090983 0.8353099295847218 1.0059563630785686 0.7133470300818829 1.074567366904856 0.9327159048252319 0.9434721039736979 1.0 11.823621793870895 -8.27232602940525 24.98863635127097 0.9753147066858286 0.8504709239543475 0.32998184404785436 0.09551305272915545 709.0836361249264 1627589.811468354 0.015528850657026286 0.018869920805130103 5.341632069405373e-09 8.27232602940525 -0.12484378273148111 AHLDHIPDYTPPLLTTIS(ph)PEQESDER ddPTM_A549_MK2206_60min_R1 4 AHLDHIPDYTPPLLTTISPEQESDER 26 0 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;K7EM61 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 AHLDHIPDYTPPLLTT(0.001)IS(0.994)PEQES(0.005)DER;AHLDHIPDYT(0.001)PPLLT(0.04)T(0.076)IS(0.854)PEQES(0.029)DER;AHLDHIPDYTPPLLT(0.018)T(0.018)IS(0.954)PEQES(0.01)DER;AHLDHIPDY(0.002)T(0.005)PPLLT(0.262)T(0.262)IS(0.44)PEQES(0.029)DER 102.72 6.8139e-12 18438100.0 1854.0300000000002 2015.2700000000002 1741.82 1951.82 2638.1800000000003 2189.3900000000003 1918.7599999999998 1810.3600000000001 2610.25 3063.55 3229.8999999999996 True False 2166.944937318494 2117.83863508587 1988.8362675510475 2430.0159876205284 2250.1072167759135 2421.069796600538 2267.373855168268 2066.9840739949773 2019.032542712722 2371.491927272119 2427.8266892948936 0.8925451503080037 0.8723187056243078 0.8191837894856734 1.0009017523101167 0.9267989460274881 0.9972168966079215 0.9339109192455474 0.851372168824491 0.8316213639199689 0.9767962176743613 1.0 11.24544972296946 -11.080858407635834 1.4308003470107447 0.9995248372729258 0.8959671453876938 0.23811816922080742 0.05769366832387831 0.45683784749746587 1.6826724895392158 0.04448667186519061 0.009981206838167367 8.301213665971085e-12 11.080858407635834 -0.103557691885232 AHLDHIPDYTPPLLTTIS(ph)PEQESDER ddPTM_A549_PD325901_60min_R1 2 AHLDHIPDYTPPLLTTISPEQESDER 26 0 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;K7EM61 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 AHLDHIPDYTPPLLT(0.005)T(0.008)IS(0.953)PEQES(0.033)DER;AHLDHIPDYTPPLLT(0.013)T(0.011)IS(0.953)PEQES(0.023)DER 81.847 3.5325e-06 34464000.0 1940.6100000000001 1600.44 1831.5 2003.45 2373.0 2380.6000000000004 1580.43 2157.57 2420.2 2156.12 2337.7 True False 2137.619298598424 1735.314695544669 1955.7966037041951 2127.198556334923 2206.328666405577 2361.213182885414 1640.574128494479 2114.5355737690775 2318.4874104722107 2019.9822152342579 2050.1777199012554 1.0426507311285091 0.8464215949182438 0.9539644220689287 1.0375678828649924 1.076164590507716 1.1517114638233115 0.8002106903071289 1.0313913536583168 1.1308714302991636 0.9852717623580204 1.0 11.001533260006001 -6.245303130781304 4.277847122575507 1.048608245815837 0.9353082721890368 0.08326260337716618 0.09820065121024206 0.2653441565886221 12.030822200536262 0.013913075191106284 0.03689593230854892 5.684560188971233e-07 6.245303130781304 -0.11329997362680022 AHLGTALK ddPTM_A549_MK2206_60min_R1 2 AHLGTALK 8 0 D6RD47;P62266;D6RDJ2;D6RIX0;D6R9I7 D6RD47 RPS23 40S ribosomal protein S23 0 ; 69.19800000000001 0.007718200000000001 5966300.0 3290.5 3342.6 3053.3 2601.8999999999996 3940.7 3103.4 3354.7 3363.3 4684.5 4321.5 4466.9 False True 3845.855954998843 3512.724062601052 3486.3038521280137 3239.3656168037273 3361.0282502137234 3431.7997281298035 3964.2055660598426 3840.0580746742703 3623.468229609324 3345.2701485879006 3357.6454498316857 1.145402637789416 1.0461867147935886 1.038318042872209 0.9647729830932901 1.001007491836938 1.022085202087622 1.1806504365309216 1.1436758681196573 1.0791694012216102 0.9963142918367377 1.0 11.71323418176999 AHLGTALK ddPTM_A549_PD325901_60min_R1 2 AHLGTALK 8 0 D6RD47;P62266;D6RDJ2;D6RIX0;D6R9I7 D6RD47 RPS23 40S ribosomal protein S23 0 ; 97.79799999999999 0.0026343000000000004 11444300.0 5489.200000000001 5284.5 5642.700000000001 4914.0 6412.8 5430.4 5250.4 5004.8 5160.700000000001 6036.4 6289.6 False True 6046.459543064537 5729.843360954362 6025.647554311579 5217.526619496272 5962.387050958993 5386.176622843382 5450.206845129121 4904.975337810352 4943.813725817672 5655.26067382153 5516.019073059393 1.0961636395704015 1.0387642401273232 1.0923906307251992 0.945886254269682 1.080922123725005 0.9764608409622493 0.9880688904337362 0.889223781289405 0.8962647990039755 1.0252431325776594 1.0 12.429411730013006 -7.526699863000208 1.7704369305662302 0.9456025647172123 1.0482292501276835 0.3814577057483345 0.05461757563428857 0.2637566145192234 1.6536014213908297 0.008888443758204844 0.015007783014238732 2.9737204331401937e-08 7.526699863000208 0.10262668541047126 AHLS(ph)ENELEALEK ddPTM_A549_MK2206_60min_R1 4 AHLSENELEALEK 13 0 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK 136.01 5.9138e-09 26982200.0 1945.1100000000001 1891.06 1312.35 938.1299999999999 1979.6100000000001 2058.39 1917.86 2227.2 2611.33 2040.39 2688.7 True False 2273.397014626287 1987.306876629673 1498.4609636590567 1167.971892114255 1688.4119913735096 2276.2074635513 2266.310336818057 2542.912420513938 2019.867924437127 1579.464481887601 2021.0215856550299 1.1248751773670245 0.9833179866733439 0.7414373870595712 0.5779116365725039 0.8354250164162801 1.1262657854362115 1.1213686943791483 1.258231202755689 0.9994291692745434 0.7815178685366112 1.0 10.980869015262051 -7.244985558875913 23.499860970694264 1.0393108725357596 0.8384204406245708 0.24718057109358016 0.16845421054246823 401.8501612306332 573933.7653863388 0.023731138815630135 0.0410083124997291 5.688718466088014e-08 7.244985558875913 -0.20089043191118883 AHLS(ph)ENELEALEK ddPTM_A549_PD325901_60min_R1 2 AHLSENELEALEK 13 0 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 AHLS(1)ENELEALEK;AHLS(1)ENELEALEK 153.95 3.057e-15 57363000.0 2313.63 1893.25 2233.34 2218.88 2294.8 1747.79 1952.4499999999998 2317.89 2318.4 2604.45 2826.2 True False 2548.5080143956143 2052.8008218614523 2384.907882564414 2355.9351781578926 2133.6211646302245 1733.556577717928 2026.7515531716342 2271.6578656004717 2220.965710453173 2440.0045825217817 2478.5953167578955 1.0282065802210776 0.8282113695537036 0.9622013994942795 0.9505122366000242 0.8608186863763984 0.6994108985832714 0.8177016794426565 0.9165101903653613 0.8960582211372397 0.9844304013748432 1.0 11.275307024757314 -10.208335042617575 0.7833005195189839 0.9956123349153672 0.8791812751860165 0.2006969411314763 0.08255626050971172 0.7396864200518912 0.8767745422427283 0.04597869569123486 0.01711020261486753 6.189633827874588e-11 10.208335042617575 -0.11643105972935064 AHLS(ph)ENELEALEKNDMEQMK ddPTM_A549_MK2206_60min_R1 3 AHLSENELEALEKNDMEQMK 20 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK 177.5 3.3651e-35 10961600.0 2381.58 2690.4300000000003 2602.27 1699.02 3393.6000000000004 2642.48 2894.1800000000003 2344.52 3890.7000000000003 3747.87 3769.2999999999997 True False 2783.53247995932 2827.3613952443475 2971.31101604073 2115.279976271906 2894.4059354747383 2922.105479663737 3420.0150431272773 2676.862889791372 3009.4626621712023 2901.2235639912383 2833.2787826122308 0.9824421433717703 0.9979114701298728 1.0487181968380945 0.7465837775136469 1.021574704627601 1.031351202570193 1.207087373157853 0.944793327864247 1.0621837429624674 1.0239809727853055 1.0 11.46825684843394 -6.973007573151241 24.99921961410892 1.0374762556467985 0.9463597132505324 0.2060900533294463 0.09241203874507595 287.73834813729496 266489.5286858711 0.012834077824030614 0.024253777922925636 1.0641244620462148e-07 6.973007573151241 -0.0911165423962661 AHLS(ph)ENELEALEKNDMEQMK ddPTM_A549_PD325901_60min_R1 3 AHLSENELEALEKNDMEQMK 20 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK 180.36 5.2453999999999996e-36 14590900.0 3959.0 3988.0 4292.0 3683.39 4154.8 3727.5999999999995 4209.0 4343.1 5318.1 4907.799999999999 5268.8 True False 4360.914765538242 4324.082755887217 4583.280929892659 3910.9046347143626 3862.981181281875 3697.2436614818394 4369.175798253174 4256.4734634039605 5094.598751190922 4597.92067042961 4620.7710016750425 0.9437634463939889 0.9357924801553085 0.9918866198370805 0.8463749087103968 0.8360035976423703 0.8001356613737357 0.9455512503582921 0.9211608759362836 1.102543006209162 0.9950548661171158 1.0 12.17391787818426 -8.661404777050933 5.953594271893421 1.0482286275472332 0.8991776900904784 0.48276611320690477 0.05948841340212767 0.12446773596308083 6.342306583154931 0.011298951028556476 0.012794918177264315 2.1806964819775603e-09 8.661404777050933 -0.1490509374567548 AHPS(ph)PGMDSR ddPTM_A549_PD325901_60min_R1 1 AHPSPGMDSR 10 0 A0A0X1KG68;Q5XG87-2;Q5XG87 A0A0X1KG68 PAPD7 Non-canonical poly(A) RNA polymerase PAPD7 1 AHPS(0.979)PGMDS(0.021)R 42.001000000000005 0.039264 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AHQGTGAGIS(ph)PVILNSGEGK ddPTM_A549_MK2206_60min_R1 2 AHQGTGAGISPVILNSGEGK 20 0 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 AHQGTGAGIS(1)PVILNSGEGK;AHQGTGAGIS(1)PVILNSGEGK 136.34 1.1757000000000001e-17 14527200.0 4043.1000000000004 4016.3 4001.8 2980.9 5971.2 4662.6 4381.4 4575.7 6106.5 5997.7 6813.1 True False 4725.476435695435 4220.712514995696 4569.315414615624 3711.220633817688 5092.844390000808 5155.993237216611 5177.443666239784 5224.319487493548 4723.387500076711 4642.81540441644 5121.219238005837 0.9227248856339724 0.8241616534735993 0.8922319475615498 0.7246752113785327 0.9944593569057829 1.0067901797588956 1.010978719250426 1.020131973402462 0.9223169875297043 0.9065839966313015 1.0 12.322271606454123 -6.7957047151139 24.999994478560613 0.9757055534383008 0.8434123483746413 0.5780651921195099 0.057126003600293844 97.62029022834353 71223.50965057267 0.00792936404445937 0.014985603533873114 1.600645967646252e-07 6.7957047151139 -0.1322932050636595 AHQGTGAGIS(ph)PVILNSGEGK ddPTM_A549_PD325901_60min_R1 2 AHQGTGAGISPVILNSGEGK 20 0 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 AHQGTGAGIS(1)PVILNSGEGK;AHQGTGAGIS(1)PVILNSGEGK 132.84 2.1490000000000002e-17 28800000.0 7102.200000000001 7396.6 6463.8 6733.6 7862.9 7245.1 7496.200000000001 6971.200000000001 6945.9 7530.3 9194.8 True False 7823.210115636701 8019.937440369957 6902.472337986988 7149.51917888484 7310.637029532412 7186.098307705246 7781.471993078041 6832.153947199398 6653.987978017903 7054.835572870963 8063.897890639551 0.9701524277381739 0.9945484862450177 0.8559721900743897 0.886608346961324 0.9065884921507361 0.8911445066841382 0.9649765037464889 0.8472520411165 0.8251577671564703 0.8748666796810644 1.0 12.977261655444284 -5.741818474541344 24.969897718177336 0.9067839301946033 0.9823505107917059 0.2955102579345512 0.049389277641000096 337.47421712600334 429468.3473481145 0.009149618748583792 0.03533356293540167 1.8120973508414615e-06 5.741818474541344 0.07556658059710253 AHS(ph)DDEKWGR ddPTM_A549_MK2206_60min_R1 1 AHSDDEKWGR 10 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 AHS(1)DDEKWGR 46.481 0.009780200000000001 10239000.0 4208.3 3510.5 2687.1 2349.0 3902.9 3275.3 3163.1 2980.9 5037.6 5323.3 5691.4 True False 4918.558156943209 3689.1694554421715 3068.1711856198785 2924.5051054506175 3328.7885801403677 3621.890072031819 3737.794326170417 3403.4517036233856 3896.591643394161 4120.762832807584 4278.068305350927 1.1497147324158357 0.8623446827222996 0.7171861145326426 0.6836041167909127 0.7781055239292887 0.8466181027314656 0.8737107636863242 0.7955580558090698 0.9108296935138641 0.963229789401308 1.0 12.06274380199542 -9.34216351403356 0.845475729434825 0.9841435587401668 0.826775433607325 0.17331495685352127 0.1157215814869672 0.5624247932269122 0.8603586093869658 0.03529496146669957 0.026267748540338646 4.548167871259001e-10 9.34216351403356 -0.15736812513284182 AHS(ph)IQIMK ddPTM_A549_MK2206_60min_R1 4 AHSIQIMK 8 0 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 1 AHS(1)IQIMK;AHS(1)IQIMK;AHS(1)IQIMK;AHS(1)IQIMK 74.16199999999999 0.0015606 54076000.0 4939.6 5441.1 4657.75 3655.93 6327.0 4814.84 4936.84 4907.57 7305.9 6664.1 6637.700000000001 True False 5773.2837183748 5718.028749182847 5318.288988061851 4551.6330141209355 5396.306681326222 5324.343172967874 5833.799924507972 5603.233076302796 5651.125315124939 5158.675181581546 4989.375898799567 1.1571154059095525 1.1460408806958384 1.065922691722109 0.9122650019646843 1.0815594556875463 1.06713610699264 1.1692444191089253 1.1230328582079618 1.132631701789514 1.0339319558629991 1.0 12.28464365052172 -10.927339060384258 1.2109119790318308 1.0005255209555346 1.0955242946166726 0.16081903459348856 0.0676058565528808 0.6311427609717288 1.6588579283564249 0.049022852102884464 0.011822882633450955 1.1821182974277147e-11 10.927339060384258 0.09499877366113796 AHS(ph)IQIMK ddPTM_A549_PD325901_60min_R1 6 AHSIQIMK 8 0 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 1 AHS(1)IQIMK;AHS(1)IQIMK;AHS(1)IQIMK;AHS(1)IQIMK;AHS(1)IQIMK;AHS(1)IQIMK 79.148 0.0010121000000000002 77067200.0 10584.599999999999 10927.9 11598.5 10792.2 11282.6 10602.2 10781.4 10614.0 12735.0 11771.6 14375.8 True False 11659.14080002931 11848.83248446838 12385.643957446418 11458.809683135469 10490.14909885696 10515.859198348206 11191.692076808451 10402.295443478073 12199.792237155434 11028.339167046171 12607.66773570453 0.9247658682351677 0.9398116077339862 0.9823897819237933 0.9088762428822953 0.8320451743147687 0.834084417419061 0.8876893261641026 0.8250769025280615 0.9676486161358769 0.8747326942805014 1.0 13.622013798964007 -8.927909835872331 8.041116155006469 0.9858314257708742 0.8929360800839026 0.06875636031585852 0.057066271242687185 0.18319704481689805 17.93545388284973 0.00893312796580969 0.009472252892860899 1.1805657081380482e-09 8.927909835872331 -0.09289534568697166 AHS(ph)NPMADHTLR ddPTM_A549_MK2206_60min_R1 1 AHSNPMADHTLR 12 0 F8VSD9;H0YHX0;Q9UBP6-2;Q9UBP6 F8VSD9 METTL1 tRNA (guanine-N(7)-)-methyltransferase 1 AHS(1)NPMADHTLR 42.518 0.020087999999999998 6865600.0 635.59 700.24 651.81 441.81 928.92 579.19 609.01 1087.4 1103.0 1121.9 897.24 True False 742.8620533164303 735.8792250331364 744.2464591935151 550.0534698336043 792.2770985328829 640.4795013647936 719.659233846873 1241.542280022835 853.1722611290609 868.4620108066104 674.4305454357575 1.1014656117576325 1.0911119462385503 1.103518315162681 0.8155820841095034 1.1747348987892938 0.9496596880127549 1.067062040290439 1.8408749254093466 1.2650261274536672 1.2876967342063175 1.0 9.397526068211814 -8.025732869172833 24.995412266924838 1.1952626406505573 1.0379118162547807 0.20562157583661023 0.22471533145799513 1505.9452431116763 1462785.2372446032 0.0393885427197136 0.0509535679469074 9.424691229830266e-09 8.025732869172833 -0.15735082439577663 AHS(ph)NPMADHTLR ddPTM_A549_PD325901_60min_R1 1 AHSNPMADHTLR 12 0 F8VSD9;H0YHX0;Q9UBP6-2;Q9UBP6 F8VSD9 METTL1 tRNA (guanine-N(7)-)-methyltransferase 1 AHS(1)NPMADHTLR 58.723 0.0028090999999999997 12835000.0 1535.8 1568.9 1361.1 1420.5 1979.5 1496.4 1496.3 1484.1 1399.6 1701.8 1714.4 True False 1691.7132854037968 1701.1167090550289 1453.4724309592025 1508.2410588104303 1840.4667489042745 1484.2138145298381 1553.2425153067784 1454.498461246072 1340.7796792401057 1594.3480575689948 1503.5396684770126 1.1251537427791258 1.131407933372419 0.9667004213008061 1.0031268814730907 1.2240892525094114 0.9871464289553795 1.0330572234785873 0.9673828311556183 0.8917487894404728 1.0603964038966562 1.0 10.55414721626546 -7.927605465261633 1.713089734950243 0.9490201803720064 1.0782147335159786 0.21208720831879013 0.07944380112275878 0.28960681129913357 1.7196860872487454 0.01288859136321454 0.018759994105471904 1.1813933849013086e-08 7.927605465261633 0.1291945531439722 AHS(ph)PAEGAS(ph)VESSSPGPK ddPTM_A549_MK2206_60min_R1 1 AHSPAEGASVESSSPGPK 18 0 Q8NFG4;C9J4C4;Q8NFG4-3;Q8NFG4-2 Q8NFG4 FLCN Folliculin 2 AHS(0.991)PAEGAS(0.454)VES(0.169)S(0.169)S(0.217)PGPK 46.578 0.0081678 8081600.0 1207.6 1041.7 1118.3 1060.3 1533.9 1132.3 1128.6 1203.6 1797.4 1388.3 1809.4 True False 1411.4133570146191 1094.7180805395549 1276.891755751075 1320.0735475986762 1308.2653419450423 1252.1192344400902 1333.652011164974 1374.2139858704095 1390.2917698579997 1074.6820657837757 1360.0760431004624 1.0377459144101435 0.8048947601812094 0.9388385026180165 0.9705880449076983 0.9619060261973947 0.9206244318411262 0.9805716510708832 1.0103949649298416 1.022216203947433 0.7901632200901829 1.0 10.409471600797234 -7.9708111130629975 3.256803578168133 1.0105975571970083 0.9354740271186003 0.0 0.08453327904855476 0.2162722743506536 4.778445853616688 0.007838799658648993 0.01083466209402391 1.0695199425127674e-08 7.9708111130629975 -0.075123530078408 AHS(ph)PAEGASVES(ph)SSPGPK ddPTM_A549_MK2206_60min_R1 1 AHSPAEGASVESSSPGPK 18 0 Q8NFG4;C9J4C4;Q8NFG4-3;Q8NFG4-2 Q8NFG4 FLCN Folliculin 2 AHS(0.992)PAEGAS(0.012)VES(0.332)S(0.332)S(0.332)PGPK 62.646 0.00042797 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AHS(ph)PAEGASVESS(ph)SPGPK ddPTM_A549_PD325901_60min_R1 1 AHSPAEGASVESSSPGPK 18 0 Q8NFG4;C9J4C4;Q8NFG4-3;Q8NFG4-2 Q8NFG4 FLCN Folliculin 2 AHS(0.998)PAEGAS(0.073)VES(0.151)S(0.46)S(0.317)PGPK 53.443999999999996 0.0045707000000000005 11186000.0 2866.5 2467.3 2655.6 2949.8 2997.1 3450.7 2897.1 3144.0 3479.1 3308.0 3629.1 True False 3157.504969794231 2675.2280299901045 2835.8249854200703 3132.002446518132 2786.594035433695 3422.5986432759364 3007.3507258539507 3081.2904535797134 3332.885525896153 3099.13231545319 3182.743706760339 0.9920701321590866 0.840541456199492 0.8910001076733284 0.9840573841574395 0.8755320227371125 1.0753610590780938 0.9448925213381639 0.96812396393554 1.0471737070179115 0.9737297756242347 1.0 11.636055272024606 -7.169091623748642 0.9690986881059989 1.0175446772613532 0.9055651050652079 0.2405113059300582 0.05914660093984332 0.3988650278323081 0.7344502402537303 0.009304050810160796 0.02296463470411724 6.774985596599049e-08 7.169091623748642 -0.1119795721961453 AHS(ph)PAEGASVESSSPGPK ddPTM_A549_MK2206_60min_R1 2 AHSPAEGASVESSSPGPK 18 0 Q8NFG4;C9J4C4;Q8NFG4-3;Q8NFG4-2 Q8NFG4 FLCN Folliculin 1 AHS(1)PAEGASVESSSPGPK;AHS(1)PAEGASVESSSPGPK 122.19 7.0827e-11 38562000.0 2981.0 4028.6 3809.2 2429.4900000000002 4709.1 3828.3999999999996 3506.8999999999996 3811.6 6478.7 5888.3 6387.1 True False 3484.119921547349 4233.638532458147 4349.401838511124 3024.715159063949 4016.397628107052 4233.5187469137545 4144.058335951135 4351.90597253544 5011.284794357975 4558.128940398044 4801.006795007717 0.7257061008891466 0.8818230661244756 0.9059353640227732 0.6300168460934426 0.8365740353218133 0.8817981160359822 0.8631644388131872 0.9064569492092219 1.043798729793283 0.9494110579343008 1.0 12.229121262549242 -8.286849819521493 1.2580366811732844 1.0215906830046693 0.8063677487657972 0.5065293505130866 0.07799923902665315 0.2067079679195247 0.6363772910961993 0.014000167355212064 0.018109679539442338 5.1659497865286386e-09 8.286849819521493 -0.21522293423887207 AHS(ph)PASLSFASYR ddPTM_A549_MK2206_60min_R1 2 AHSPASLSFASYR 13 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 AHS(1)PASLSFASYR;AHS(1)PASLSFASYR 75.574 0.00032566 5890600.0 1204.13 1465.3899999999999 1430.4299999999998 1157.33 1543.55 1352.1100000000001 1171.12 1279.18 1887.6499999999999 2053.17 2192.63 True False 1407.3577058479732 1539.972091813246 1633.2864832147084 1440.8759019545173 1316.49583972832 1495.189382742021 1383.89734477718 1460.5076823244528 1460.1002889576355 1589.357471011505 1648.139457490531 0.8539069309042733 0.9343700163322457 0.9909880355037202 0.8742439211718196 0.7987769686266878 0.907198341709874 0.839672479466217 0.886155401283962 0.8859082174883397 0.9643343369932251 1.0 10.68662260613814 -10.548072884477016 0.7885543068705333 1.0021980952915717 0.8864551154426047 0.36328114464652983 0.04847731547883108 0.5294454859588286 0.5739742692966648 0.0366758469559017 0.009566299196702299 2.830916863790846e-11 10.548072884477016 -0.11574297984896698 AHS(ph)PASLSFASYR ddPTM_A549_PD325901_60min_R1 2 AHSPASLSFASYR 13 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 AHS(1)PASLSFASYR;AHS(1)PASLSFASYR 94.48700000000001 5.3002e-05 12143400.0 1261.5900000000001 1405.7 1425.64 1012.1 4328.9 1208.5900000000001 1107.58 1598.04 1688.24 1461.23 1444.4499999999998 True False 1389.6656880665296 1524.1632723045796 1522.3925034697509 1074.6151183541267 4024.852997894269 1198.7476437467374 1149.7295629910323 1566.1658385618716 1617.2891438127454 1368.9676884249286 1266.7918071229712 1.0969961127413816 1.20316792683253 1.201770089536084 0.8482965490554445 3.1772016327096155 0.9462862303074331 0.9075915683431829 1.2363245718480078 1.2766810889674078 1.0806572009129192 1.0 10.306963726653551 -9.852917339732896 0.4721921590873881 0.9935606166547576 1.3671034639949933 0.035290679331546615 0.6069392689837918 3.1345640996056914 1.4138456804570156 0.5005377354660987 0.18182378826148798 1.4030807307302058e-10 9.852917339732896 0.3735428473402357 AHS(ph)PERR ddPTM_A549_PD325901_60min_R1 1 AHSPERR 7 1 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 AHS(1)PERR 68.625 0.0094644 60824000.0 2668.5 2520.8 1933.2 1888.0 2454.0 1636.0 1346.2 1467.8 2221.4 2679.2 3560.0 True False 2939.4041555541276 2733.2366627483702 2064.398577275976 2004.6174720408953 2281.639505840408 1622.6769584140718 1397.4303776689057 1438.5235775331762 2128.042283126587 2510.034854764867 3122.142568699351 0.9414701894214427 0.8754362117060546 0.661212142575533 0.6420646808822686 0.7307928627970737 0.5197318580778522 0.44758698455306584 0.46074884342403644 0.6815967677008116 0.8039462643150593 1.0 11.608320702330035 -10.341182587517462 0.943853248856911 0.9813337391155356 0.6582140996584139 0.23168789208682183 0.15615402114806867 0.4191028390583901 0.7224533723517246 0.07919738357945039 0.030381504944800443 4.5584522770597664e-11 10.341182587517462 -0.32311963945712163 AHS(ph)PGLLGPALGPPYPSGR ddPTM_A549_MK2206_60min_R1 2 AHSPGLLGPALGPPYPSGR 19 0 Q6UXY1-2;Q6UXY1 Q6UXY1-2 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 AHS(1)PGLLGPALGPPYPSGR;AHS(1)PGLLGPALGPPYPSGR 118.08 1.5425e-14 22617800.0 1630.07 2002.66 1669.3 1241.08 2023.2 1736.65 1549.23 1508.2199999999998 2875.0 2630.6 2717.7 True False 1905.1859646147884 2104.586839947534 1906.03184107598 1545.1446557141978 1725.5899601168348 1920.4211503050292 1830.7050374420644 1722.0148037300341 2223.817090431595 2036.3456329689532 2042.8200852957482 0.9326254320330741 1.0302360227884892 0.933039504944967 0.7563782375335811 0.8447097091602237 0.9400833505252134 0.8961655755293912 0.842959600860166 1.088601539821674 0.9968306301796236 1.0 10.996346433676296 -8.763349460331137 24.996721584430734 1.0418396191322383 0.897640154284289 0.40957567835220077 0.06978665097009272 34.78505298893628 455220.96279053984 0.013105536097106156 0.014297132377846309 1.7244497341370332e-09 8.763349460331137 -0.14419946484794932 AHS(ph)PGLLGPALGPPYPSGR ddPTM_A549_PD325901_60min_R1 2 AHSPGLLGPALGPPYPSGR 19 0 Q6UXY1-2;Q6UXY1 Q6UXY1-2 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 AHS(1)PGLLGPALGPPYPSGR;AHS(1)PGLLGPALGPPYPSGR 124.66 4.2468e-15 28306000.0 2989.3 2457.0299999999997 2703.8 2780.7 3607.8 3662.7 2608.5 3585.7 4075.5 2625.0 3534.9 True False 3292.7715353936505 2664.092541047536 2887.2961272702164 2952.457523572097 3354.4005742343193 3632.8721855643153 2707.7678949259694 3514.180400572768 3904.220907933017 2459.2570520146965 3100.1297095773416 1.062139924410638 0.8593487339633757 0.9313468782775086 0.9523658040665087 1.0820194277263462 1.1718452212954682 0.8734369683180562 1.1335591506756266 1.2593734048841787 0.7932755343807795 1.0 11.59811286385487 -6.788418524383616 4.110891622862349 1.1091778975277324 0.9414730987409937 0.0 0.14008177696893756 0.21481818665955188 8.003807263403132 0.017869150844384417 0.03611222167291688 1.627726655909815e-07 6.788418524383616 -0.16770479878673872 AHS(ph)VDVEK ddPTM_A549_MK2206_60min_R1 2 AHSVDVEK 8 0 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 AHS(1)VDVEK;AHS(1)VDVEK 83.869 0.001552 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AHS(ph)VDVEK ddPTM_A549_PD325901_60min_R1 2 AHSVDVEK 8 0 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 AHS(1)VDVEK;AHS(1)VDVEK 94.309 0.00091545 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AHSEVFTKPSGQQTLS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 AHSEVFTKPSGQQTLSPDR 19 1 F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 F5H212 HIVEP1 Zinc finger protein 40 1 AHSEVFTKPSGQQT(0.002)LS(0.997)PDR;AHSEVFT(0.01)KPS(0.033)GQQT(0.158)LS(0.799)PDR 109.08 2.4723e-10 3691500.0 1028.9 1268.6 1411.3 1170.4 1351.1 1230.0 1288.8 1206.5 2215.7 1890.0 2126.6 True False 1202.5531658101531 1333.1663213712966 1611.443561559056 1457.1480525412535 1152.3549797913472 1360.1577835920789 1522.9582775025872 1377.5250697512868 1713.8474877458384 1463.047687337993 1598.5065288258215 0.752297938184516 0.8340074296415732 1.0080931998086597 0.9115684085516983 0.7208947595840014 0.8508928547143182 0.952738227864025 0.8617575498819788 1.072155450628494 0.9152591252865702 1.0 10.64250892123307 -8.754197922330974 24.978459639454154 1.0340734089624013 0.8651648472133397 0.2988939170554681 0.08619104956558059 104.43693253117391 360241.17169553816 0.013914792671519976 0.015620071291581739 1.7611732387133183e-09 8.754197922330974 -0.16890856174906155 AHSEVFTKPSGQQTLS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 AHSEVFTKPSGQQTLSPDR 19 1 F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 F5H212 HIVEP1 Zinc finger protein 40 1 AHSEVFTKPS(0.001)GQQT(0.027)LS(0.972)PDR;AHSEVFTKPSGQQTLS(1)PDR 152.95 3.6694e-22 12566700.0 3246.5 3008.5 2839.5 2825.1 3436.3 3502.7 3037.8 3126.9 3547.3999999999996 3335.5 3974.9 True False 3576.082290053016 3262.036853331668 3032.2055453006074 2999.6000107323825 3194.94614259144 3474.1751725164822 3153.4051413479433 3064.5315264944056 3398.3151144158014 3124.8959607600104 3486.01249896715 1.0258374836901911 0.9357501885888699 0.8698206177398967 0.8604673711356791 0.9165045000664949 0.9966043361995475 0.9045880192002316 0.8790936714662893 0.9748430665187426 0.896409855583096 1.0 11.767362026863951 -8.923079166759432 6.7171830534091 0.9890461872993582 0.9216757730773875 0.0 0.05555093088944968 0.20808293798145341 14.601688215146527 0.008629363995227495 0.009128395470190875 1.1937704743580368e-09 8.923079166759432 -0.06737041422197076 AHSIQIMK ddPTM_A549_MK2206_60min_R1 1 AHSIQIMK 8 0 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 0 66.07300000000001 0.0099295 2168900.0 1685.5 1950.8 1932.8 1345.0 2196.0 1993.4 2047.0 1702.5 2932.1 2231.7 2469.1 False True 1969.9711934814004 2050.0873874595018 2206.900103295786 1674.5250603793447 1872.9713090236098 2204.340264888171 2418.913403202821 1943.8345886875816 2267.9840316015598 1727.5574200170354 1855.9543263067053 1.0614330134953187 1.104600128570575 1.1890918176243337 0.9022447571280487 1.00916885856279 1.1877125604026817 1.3033259326033027 1.0473504445315502 1.2220042268576627 0.9308189299328417 1.0 10.857945491883175 -7.252360469352541 24.63781612774545 1.1242066519408351 1.055308473169078 0.06202597900810314 0.11690578735596639 1259.4658367649251 3417857.348971456 0.017583475393059652 0.030181691767010632 5.5929318908879024e-08 7.252360469352541 -0.06889817877175708 AHSIQIMK ddPTM_A549_PD325901_60min_R1 4 AHSIQIMK 8 0 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 0 ;;; 87.323 0.0029166 10830600.0 5852.0 6514.8 5417.200000000001 5085.92 7592.0 6548.9 5886.9 5609.400000000001 7100.6 7410.4 7287.799999999999 False True 6446.090731985295 7063.825059692588 5784.843768269926 5400.0657274376235 7058.7641109781525 6495.567929680878 6110.9292009352885 5497.516116510829 6802.186475001646 6942.50607933322 6391.446801170542 1.008549540114258 1.1051996956931418 0.9050914367636571 0.8448894116506837 1.1044078642233863 1.0162906978262365 0.9561104693566598 0.8601364116030823 1.06426395878878 1.0862182374829055 1.0 12.641926828762498 AHSLGGLDPAFTS(ph)TEDLNCK ddPTM_A549_MK2206_60min_R1 2 AHSLGGLDPAFTSTEDLNCK 20 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AHSLGGLDPAFT(0.217)S(0.461)T(0.322)EDLNCK;AHSLGGLDPAFT(0.11)S(0.628)T(0.262)EDLNCK 70.699 0.00025872 4301200.0 3292.6000000000004 3235.5 3462.0 2857.9 4407.6 2986.1 2840.3999999999996 3673.0 4616.8 4543.3 4473.4 True False 3848.3103836587748 3400.173130062142 3952.9636577038523 3558.085628296005 3759.2478787124155 3302.0871199872427 3356.4639132668744 4193.658998090741 3571.1021715146417 3516.96537454111 3362.5313204408135 1.1444682642106299 1.0111944859494701 1.1755916245816962 1.0581568732658095 1.1179815206062063 0.9820241970428258 0.998195583447192 1.24717321518985 1.0620279281284093 1.0459279154253502 1.0 11.715331990438173 -9.87256274372182 1.1744925369320571 1.0103949930754927 1.0859972537161333 0.08939417078976608 0.07717294531786893 0.5774067808021949 1.612143720730652 0.022350856235603782 0.013893796515846088 1.3410261796580413e-10 9.87256274372182 0.07560226064064057 AHSS(ph)PASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR ddPTM_A549_PD325901_60min_R1 1 AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR 37 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 AHS(0.48)S(0.515)PAS(0.005)LQLGAVSPGTLTPTGVVSGPAATPTAQHLR 64.687 0.00075226 2575300.0 2443.6 2887.5 2543.0 2626.1 3003.7 2473.6 2862.8 3682.2 2632.9 3395.4 3023.3 True False 2691.6724731167565 3130.8397586821297 2715.583272301267 2788.308232694174 2792.730474202458 2453.4558217194653 2971.7454205842682 3608.7556323699805 2522.2483691563853 3181.0138645374113 2651.4532662777374 1.0151687406112502 1.1808014112492289 1.024186738208499 1.0516150777224753 1.0532829334469296 0.9253249351680136 1.1207987175863656 1.3610481762087248 0.9512701586090041 1.1997246585466323 1.0 11.372567604853538 AHT(ph)FSHPPSSTK ddPTM_A549_PD325901_60min_R1 2 AHTFSHPPSSTK 12 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 AHT(0.97)FS(0.03)HPPSSTK;AHT(0.957)FS(0.043)HPPS(0.001)STK 70.889 0.0013535 5021300.0 1417.12 1654.29 1612.7800000000002 1706.85 2232.24 1900.8200000000002 1877.9299999999998 1982.73 1999.62 2303.6000000000004 2550.6000000000004 True False 1560.9849791713946 1793.7028240312598 1722.2329492339904 1812.2782479623952 2075.45516320994 1885.340352134862 1949.3956537927259 1943.1828947284046 1915.5829252658616 2158.1503028651655 2236.8923695855515 0.697836427177143 0.8018726553050894 0.7699221351240442 0.8101767758715059 0.9278296941906408 0.8428391002487865 0.8714749445695983 0.8686975382228315 0.8563590056059686 0.9647984553074518 1.0 11.127280125949243 -14.999992585797457 0.026399019195558517 2.166024797190794 9.429917506006053e-08 0.7637162543884426 0.040340354295648875 472.89825998130704 0.9671836098499068 58.15359485188981 26.842838179239862 1.0000170719779756e-15 14.999992585797457 -2.166024702891619 AHT(ph)PLNTPDPSTK ddPTM_A549_PD325901_60min_R1 1 AHTPLNTPDPSTK 13 0 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 AHT(0.999)PLNT(0.001)PDPSTK 121.82 7.4679999999999995e-06 24082000.0 5788.1 5203.0 4904.4 5974.8 6173.0 6393.7 5751.9 5874.9 6342.0 5804.3 5964.7 True False 6375.703651025985 5641.4750699300885 5237.2420765530205 6343.849826244671 5739.429775693906 6341.6318270244765 5970.791702060451 5757.720510730109 6075.467794899078 5437.815507431962 5231.079713348601 1.2188121765295503 1.078453279068611 1.0011780289236836 1.212722836177877 1.0971788025038318 1.2122988320827883 1.1414071337556302 1.1006753531278892 1.1614175519818173 1.039520673629923 1.0 12.352893039227125 -10.810008534836038 0.9110433352064873 0.9947811591298384 1.134607640846306 0.3248592261245904 0.06382996216305326 0.5232740268607045 0.722591240426561 0.05091980794036774 0.010903542637159053 1.5487861815789265e-11 10.810008534836038 0.1398264817164675 AHT(ph)PTPGIYMGR ddPTM_A549_MK2206_60min_R1 10 AHTPTPGIYMGR 12 0 Q13595;Q13595-3;Q13595-4;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.974)PT(0.026)PGIYMGR;AHT(0.49)PT(0.49)PGIY(0.019)MGR;AHT(0.959)PT(0.041)PGIYMGR;AHT(0.975)PT(0.025)PGIYMGR;AHT(0.981)PT(0.019)PGIYMGR;AHT(0.972)PT(0.028)PGIYMGR;AHT(0.977)PT(0.023)PGIYMGR;AHT(0.999)PT(0.001)PGIYMGR;AHT(0.995)PT(0.005)PGIYMGR;AHT(0.999)PT(0.001)PGIYMGR 112.08 4.9712e-05 1341072000.0 14614.570000000002 14132.520000000002 12807.6 11061.019999999999 17760.300000000003 14749.859999999999 13980.659999999998 14825.76 18483.059999999998 20747.8 19959.6 True False 17081.152124068503 14851.804903126495 14623.910266437857 13770.970396548048 15147.783396927143 16310.68039503534 16520.76495340574 16927.35688198578 14296.67642138177 16060.857570027094 15003.080463064 1.138509665806332 0.9899170333512555 0.9747271770247704 0.9178761941889683 1.0096448815441195 1.0871554301925204 1.1011581917512285 1.128258754837658 0.952916066575706 1.0705039948007498 1.0 13.872971127771402 AHT(ph)PTPGIYMGR ddPTM_A549_PD325901_60min_R1 11 AHTPTPGIYMGR 12 0 Q13595;Q13595-3;Q13595-4;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.971)PT(0.028)PGIYMGR;AHT(0.968)PT(0.032)PGIYMGR;AHT(0.928)PT(0.071)PGIYMGR;AHT(0.995)PT(0.005)PGIYMGR;AHT(0.962)PT(0.037)PGIY(0.001)MGR;AHT(0.966)PT(0.034)PGIYMGR;AHT(0.993)PT(0.007)PGIYMGR;AHT(0.996)PT(0.004)PGIYMGR;AHT(0.989)PT(0.011)PGIYMGR;AHT(0.997)PT(0.003)PGIYMGR;AHT(0.974)PT(0.026)PGIYMGR 124.51 5.289199999999999e-06 1866669000.0 56074.8 56591.9 59894.79999999999 56640.3 65735.49999999999 59957.19999999999 53510.4 54719.50000000001 58293.700000000004 63457.700000000004 68400.0 True False 61767.47241591402 61361.09802229033 63959.621304691194 60138.842691545564 61118.465255163785 59468.92844194633 55546.767554014456 53628.076645882706 55843.8185108024 59450.96999224117 59987.23362332454 1.029676960997536 1.0229026130391785 1.0662205512978031 1.0025273555565677 1.018857872975816 0.9913597418972047 0.9259764819762664 0.8939914946341311 0.9309283848870291 0.9910603707040283 1.0 15.872367881136896 -7.389302152697615 2.7012537718145446 0.9571315054878862 1.0295183025949068 0.5817148884660368 0.03164838114716067 0.2054507100849096 2.90981179140056 0.005934286445409529 0.009959094869143493 4.080354041472358e-08 7.389302152697615 0.07238679710702067 AHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A549_MK2206_60min_R1 5 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.882)PT(0.117)PGIYMGRPT(0.001)HS(0.001)GGGGGGGGGGGGGGGGR;AHT(0.78)PT(0.22)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.936)PT(0.064)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.568)PT(0.432)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.923)PT(0.077)PGIYMGRPTHSGGGGGGGGGGGGGGGGR 195.84 6.530099999999999e-88 447999000.0 6973.8099999999995 6136.55 4868.610000000001 4681.28 7277.3 6062.58 5409.650000000001 4788.87 7938.0 10922.4 10817.7 True False 8150.818634715232 6448.874183675731 5559.05210673991 5828.193810150645 6206.818810181019 6704.118191585096 6392.513381356202 5467.706987799292 6140.055674381223 8455.022254063751 8131.366536668439 1.0023922298864618 0.7930861503530188 0.6836553341521793 0.7167545312178925 0.7633180452745966 0.8244762010607738 0.7861548673927231 0.6724216603866815 0.7551074775306967 1.039803360964702 1.0 12.989282112977545 -10.630037847922836 0.8826123524776903 1.0016185971813312 0.7719064813466381 0.5334191780163968 0.08598271376603282 0.40160205219284517 0.5523715728460367 0.0592678537362018 0.015618274068860648 2.3440245292213188e-11 10.630037847922836 -0.2297121158346931 AHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A549_PD325901_60min_R1 10 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.858)PT(0.141)PGIYMGRPT(0.001)HS(0.001)GGGGGGGGGGGGGGGGR;AHT(0.81)PT(0.189)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.992)PT(0.008)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.733)PT(0.262)PGIY(0.001)MGRPT(0.003)HS(0.001)GGGGGGGGGGGGGGGGR;AHT(0.763)PT(0.234)PGIY(0.003)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.773)PT(0.225)PGIYMGRPT(0.002)HS(0.001)GGGGGGGGGGGGGGGGR;AHT(0.709)PT(0.291)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.898)PT(0.102)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.671)PT(0.329)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.771)PT(0.229)PGIYMGRPTHSGGGGGGGGGGGGGGGGR 190.62 2.6278999999999998e-76 1076748000.0 15064.23 12556.210000000001 13676.42 14665.02 14075.82 14837.289999999999 12116.81 13446.83 16123.000000000002 14998.039999999999 18422.76 True False 16593.5395399 13614.365882722836 14604.58410419445 15570.844978723077 13087.182962142844 14716.460029527825 12577.92183512285 13178.622426815928 15445.406379242804 14051.06119481848 16156.877311497663 1.0270263999647753 0.8426359636360233 0.9039236866520883 0.9637286140461344 0.8100069530657176 0.9108480398656739 0.7784871787181343 0.8156664293933624 0.955964824233173 0.8696644112547275 1.0 13.979860770551012 -8.934835203924079 6.149410874582579 0.9809366649081783 0.8788502917832085 0.05734846692456308 0.07611479624717488 0.17638473495266915 12.03623307761529 0.011732172022407485 0.012359313879691438 1.1618894172605144e-09 8.934835203924079 -0.10208637312496982 AHTLLS(ph)PPSANNATFAR ddPTM_A549_PD325901_60min_R1 1 AHTLLSPPSANNATFAR 17 0 C9IZD2;C9J8Z7;C9JLE1;C9JHC7;F8W8R3;A0A087WWF6;P49005 C9IZD2 POLD2 DNA polymerase delta subunit 2 1 AHT(0.058)LLS(0.941)PPS(0.001)ANNATFAR 47.567 0.015213999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AHTPT(ph)PGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A549_MK2206_60min_R1 3 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.051)PT(0.883)PGIY(0.06)MGRPT(0.005)HS(0.002)GGGGGGGGGGGGGGGGR;AHT(0.474)PT(0.51)PGIYMGRPT(0.008)HS(0.008)GGGGGGGGGGGGGGGGR;AHT(0.042)PT(0.94)PGIY(0.014)MGRPT(0.003)HS(0.001)GGGGGGGGGGGGGGGGR 73.107 4.2724e-05 246946000.0 1169.37 1248.4 1395.49 684.8299999999999 1356.8799999999999 1329.72 846.5999999999999 978.36 1349.0500000000002 1577.73 2140.83 True False 1366.7310676483812 1311.9382276524723 1593.391465825867 852.6133807431863 1157.2847494480673 1470.4300878033007 1000.416261432099 1117.04552610184 1043.492328990172 1221.319697218926 1609.2028270978014 0.8493218161400337 0.8152721369614755 0.9901744136875211 0.5298358705228446 0.7191664903641956 0.9137630527627288 0.6216843797349961 0.6941608026605525 0.6484529553506385 0.7589594528749225 1.0 10.652130462312215 -10.922809056996023 1.1902649374144245 0.999370587216755 0.744964350670412 0.008502420925149967 0.14486933724395973 0.43202506893194687 1.0917536650015178 0.08914735171359132 0.02127212494898173 1.1945131716943786e-11 10.922809056996023 -0.254406236546343 AHTPT(ph)PGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A549_PD325901_60min_R1 2 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.361)PT(0.626)PGIY(0.011)MGRPT(0.001)HSGGGGGGGGGGGGGGGGR;AHT(0.411)PT(0.589)PGIYMGRPTHSGGGGGGGGGGGGGGGGR 119.22 4.8153000000000004e-21 137827000.0 1146.76 1251.02 1375.55 1394.52 1375.1100000000001 1349.73 1130.51 1271.3799999999999 1595.22 1532.55 2032.84 True False 1263.178230999907 1356.4478458550714 1468.9030948541117 1480.6563332152916 1278.5270174719649 1338.7382463815557 1173.5321766888094 1246.0213285216842 1528.1784509269803 1435.78453145338 1782.8135672344904 0.7085307483717188 0.7608467148694634 0.8239241173897289 0.8305166397808456 0.7171400537719839 0.750913203144518 0.6582472773691074 0.6989072505514522 0.8571723252574853 0.8053475460592193 1.0 10.799940129695138 -9.44055408937658 1.0544125803479865 0.9694354678973505 0.7482143779952938 0.3409009545165985 0.0738659982262585 0.1745211274023968 0.4063731208739884 0.01673720261581143 0.01267488845794516 3.62615121389897e-10 9.44055408937658 -0.2212210899020567 AHTS(ph)PAPAPRPTPR ddPTM_A549_PD325901_60min_R1 1 AHTSPAPAPRPTPR 14 1 Q96P48-3;Q96P48 Q96P48-3 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 1 AHT(0.163)S(0.837)PAPAPRPT(0.001)PR 45.723 0.011816 6430500.0 1305.1 1361.9 1224.3 1453.4 1727.3 1380.9 1335.2 1645.9 1042.7 1464.3 1710.2 True False 1437.5927912361592 1476.6720925884658 1307.388360313976 1543.1732170891091 1605.9804068615065 1369.654408235936 1386.0117666494755 1613.0712333164292 998.8789450869241 1371.8438481009987 1499.8562418510194 0.9584870543739452 0.9845424190561481 0.8716757805404651 1.0288807513876337 1.0707562245295696 0.9131904578705509 0.9240964086924458 1.0754838952603136 0.6659831237253622 0.9146502243494773 1.0 10.550608512644779 -8.738751177383437 24.999675492339982 0.8422697403825111 0.9758160097173567 0.22615976149215056 0.09571575667422709 294.3963864535845 324389.34784219734 0.021787825104944033 0.02469673973430149 1.8249409758640586e-09 8.738751177383437 0.1335462693348456 AIAGDEHKR ddPTM_A549_PD325901_60min_R1 2 AIAGDEHKR 9 1 M0R196;A0A087WY80;A8MU39;H0YDU8;E7EU14;P53041 M0R196 PPP5D1;PPP5C Serine/threonine-protein phosphatase;Protein PPP5D1;Serine/threonine-protein phosphatase 5 0 ; 55.567 0.0054699 4090600.0 344.095 428.96000000000004 372.14 508.67 437.47 649.13 487.11 552.29 555.14 550.6800000000001 541.41 False True 379.02727109064926 465.1099646352512 397.39565825961193 540.0893906266114 406.74361638956924 643.8437004983655 505.64723760681966 541.2741426868769 531.809396351352 515.9099708203634 474.82000228076294 0.7982546423276603 0.9795500661327022 0.836939590477973 1.1374613285715254 0.8566269627138836 1.3559742584678607 1.0649240452760633 1.1399564889577236 1.120023153609462 1.0865379898534766 1.0 8.89123690104653 -6.25850594875311 24.954598023129755 1.0757629965699769 0.8823782894996718 0.3964014866307777 0.12097439532668898 213.01011373296507 1812057.9126885168 0.016138721056235393 0.04073856714157907 5.514346490482643e-07 6.25850594875311 -0.19338470707030508 AIAMSLGQDIPMDQRAES(ph)PEEVACR ddPTM_A549_PD325901_60min_R1 3 AIAMSLGQDIPMDQRAESPEEVACR 25 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AIAMS(0.024)LGQDIPMDQRAES(0.976)PEEVACR;AIAMS(0.034)LGQDIPMDQRAES(0.966)PEEVACR;AIAMSLGQDIPMDQRAES(1)PEEVACR 92.238 5.5137e-09 11148600.0 4530.200000000001 4488.2 3884.9 4834.6 5460.4 5131.6 4906.6 5428.3 4955.1 5014.700000000001 5572.6 True False 4990.102569043027 4866.436365339268 4148.552675801487 5133.22226182676 5076.88034135736 5089.809950976559 5093.32334799454 5320.028298081029 4746.854378824415 4698.070986185942 4887.205527621911 1.0210543716321228 0.9957502989867609 0.8488598755166639 1.0503389376228176 1.0388104843685064 1.0414560881897748 1.0421749851132054 1.0885624244801768 0.9712819221528034 0.9613000639389929 1.0 12.25479406193871 -5.256109233875219 20.829255616254446 0.9986115110279198 1.0210544488229878 0.0 0.06082090150593024 315.4623308408696 1232295.0280370093 0.008170979234459886 0.08901085988557393 5.544862308782543e-06 5.256109233875219 0.022442937795068008 AICGLT(ph)PGRR ddPTM_A549_MK2206_60min_R1 2 AICGLTPGRR 10 1 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 AICGLT(1)PGRR;AICGLT(1)PGRR 79.23 0.00078723 32986000.0 3023.9 2789.1 2549.3999999999996 2108.55 2979.8999999999996 3244.2 2473.8 2251.5 3290.5 3791.5 4004.3999999999996 True False 3534.2603927430496 2931.0532767907025 2910.943255040497 2625.1448446564073 2541.5606574496587 3587.4990906743283 2923.257438614136 2570.657019929569 2545.207003848754 2934.9975166888876 3009.996964182321 1.1741740721998193 0.9737728348795648 0.9670917577922767 0.8721420240267715 0.844373163060676 1.191861365099047 0.9711828528067143 0.8540397384181081 0.8455845750462977 0.9750832149049004 1.0 11.555546316576859 -8.013391395406106 24.688745821710192 0.9192348575598005 0.9954445527914944 0.11634733541063558 0.1083513824758223 1080.859805554956 1992703.7691000528 0.018242616761034735 0.02410844289518414 9.696357170670243e-09 8.013391395406106 0.07620969523169385 AICGLT(ph)PGRR ddPTM_A549_PD325901_60min_R1 2 AICGLTPGRR 10 1 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 AICGLT(1)PGRR;AICGLT(1)PGRR 81.525 0.00068663 58453000.0 8985.6 9623.4 10913.8 9630.7 9091.6 8264.8 9703.5 10912.6 8305.5 10874.0 11691.3 True False 9897.811497150904 10434.397691325235 11654.476098010837 10225.566466093354 8453.037380317302 8197.494208985709 10072.772002458938 10694.939632230906 7956.448718154257 10187.41378423155 10253.344217256947 0.965325194144203 1.017657992381019 1.136651208724243 0.9972908593942608 0.82441759500187 0.7994946853719074 0.9823889444290678 1.0430684277848323 0.775985722274213 0.9935698605617441 1.0 13.323806913549452 -6.570338254713413 7.529629964370392 0.8990972195875968 1.0424993557300124 0.25115725061804395 0.09188889985103542 0.21958428851600714 29.297743653054464 0.015037382235689511 0.031503279644891045 2.689439290589706e-07 6.570338254713413 0.1434021361424156 AIDGLNR ddPTM_A549_MK2206_60min_R1 2 AIDGLNR 7 0 B4DK69;P52895;Q04828 B4DK69;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 134.66 0.015484999999999999 54933000.0 10299.2 10781.5 9278.9 9505.400000000001 14233.5 10518.1 9649.7 10010.0 15248.699999999999 15059.5 14176.7 False True 12037.453168735474 11330.23229849018 10594.78754577363 11834.223426713625 12139.77100500344 11631.118360650285 11402.925582260026 11428.948154339321 11794.893797170189 11657.548490723011 10656.234132984597 1.1296160555890513 1.0632491888874076 0.9942337427608906 1.1105446144508742 1.139217743670515 1.091484873126811 1.0700708561727421 1.0725128607077914 1.1068538519307736 1.093965123630215 1.0 13.379410065530813 -10.843105731524412 0.9678051077479963 0.9973614201285546 1.0860059745160806 0.0 0.04612048992409722 0.48445039252813316 0.7652000161213705 0.03106842146151413 0.006747315572415582 1.4351399976171833e-11 10.843105731524412 0.08864455438752605 AIDGLNR ddPTM_A549_PD325901_60min_R1 4 AIDGLNR 7 0 B4DK69;P52895;Q04828 B4DK69;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ;;; 107.67 0.025421 102242000.0 22663.2 21764.1 21957.3 23387.199999999997 27440.4 25171.7 23011.7 24460.399999999998 27688.5 25779.5 29786.1 False True 24963.95138023397 23598.237088115602 23447.454417971134 24831.77422781506 25513.080968240894 24966.710020850525 23887.422835985413 23972.518133187405 26524.848634352446 24151.777970443018 26122.598529644856 0.9556457927378086 0.9033648417991602 0.897592725752843 0.9505859150893844 0.9766670394328397 0.9557513963443343 0.9144351703325806 0.9176927060293231 1.0153985486647166 0.9245549573881297 1.0 14.673010794786281 -8.765221090393238 24.99993270630052 1.0072715412932336 0.9337867929046014 0.1559899697994268 0.034259911314266214 43.5711907283081 288037.65954494645 0.004361905198614737 0.0047302696077650514 1.7170340578819837e-09 8.765221090393238 -0.07348474838863217 AIDS(ph)PGGAVR ddPTM_A549_MK2206_60min_R1 2 AIDSPGGAVR 10 0 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 AIDS(1)PGGAVR;AIDS(1)PGGAVR 92.866 0.0006111000000000001 9108100.0 3310.8 3271.2 2867.3 2950.8999999999996 4566.7 3116.2 3000.3 3091.3 4626.799999999999 4491.3 5091.4 True False 3869.5820987114907 3437.69010757511 3273.9262552669743 3673.8706324709324 3894.944479470911 3445.9542156338503 3545.4156734877483 3529.5012417092044 3578.837187481359 3476.712210656682 3827.064864508509 1.0111096194363671 0.898257601917232 0.8554666229017335 0.9599708294839026 1.0177367296781157 0.9004169873343386 0.9264059531280164 0.9222475622091346 0.9351388895105573 0.9084539545956138 1.0 11.902022637957943 -10.533984916459202 0.7574378223285302 1.0018885180269919 0.9340089700211922 0.0 0.052505511434221136 0.8719273531471763 0.8636206380053588 0.03471071428255619 0.008856263180877878 2.9242539387414653e-11 10.533984916459202 -0.06787954800579965 AIDS(ph)PGGAVR ddPTM_A549_PD325901_60min_R1 1 AIDSPGGAVR 10 0 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 AIDS(1)PGGAVR 89.266 5.3784e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AIDVKS(ph)PR ddPTM_A549_MK2206_60min_R1 4 AIDVKSPR 8 1 A0A3B3ISF0;Q659C4-9;Q659C4;Q659C4-2;Q659C4-5 A0A3B3ISF0 LARP1B La-related protein 1B 1 AIDVKS(1)PR;AIDVKS(1)PR;AIDVKS(1)PR;AIDVKS(1)PR 59.067 0.0037073 18991100.0 5129.7 5998.6 5610.6 5737.6 7204.300000000001 5832.4 5001.27 5806.8 7751.200000000001 8613.1 9212.2 True False 5995.467950876025 6303.903117907819 6406.267445959921 7143.312257570648 6144.557013478504 6449.580696766215 5909.936021512544 6629.9316825791775 5995.565576122916 6667.394727942259 6924.556496214255 0.8658269961626892 0.910369223119812 0.9251520222937469 1.0315913028474806 0.8873574815712476 0.9314070439445882 0.8534750239590915 0.9574521756308649 0.8658410945741825 0.9628623481644507 1.0 12.757505957094365 -11.022630758934229 1.3096824413751749 1.0000232065641015 0.9114335745598583 0.20731070122295958 0.048941182631461376 0.43890197453159874 1.3404176129606369 0.03434268271311453 0.007739773906353058 9.49225160071104e-12 11.022630758934229 -0.08858963200424319 AIDVKS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AIDVKSPR 8 1 A0A3B3ISF0;Q659C4-9;Q659C4;Q659C4-2;Q659C4-5 A0A3B3ISF0 LARP1B La-related protein 1B 1 AIDVKS(1)PR;AIDVKS(1)PR 91.54899999999999 0.00072705 35022000.0 9937.5 9423.7 10343.400000000001 10124.400000000001 10537.2 11284.900000000001 11213.9 11451.099999999999 10145.7 11103.2 11173.5 True False 10946.34768439915 10217.868271478024 11045.365323916993 10749.761193819302 9797.103423366558 11192.999515896667 11640.651100981537 11222.698827285827 9719.311511622142 10402.142057116038 9799.230334652299 1.1170619845203948 1.0427215120503217 1.1271666188780234 1.0970005629733706 0.9997829511897256 1.1422325155798905 1.1879148365170638 1.1452632955875954 0.9918443775377392 1.061526436452025 1.0 13.258452724095427 -8.772984106637997 24.997613598497868 0.9961487216075074 1.1058083937634873 0.3505392446913761 0.052061353766278705 129.04202596299533 279411.84485134284 0.008671298888432495 0.009270152206876476 1.6866147473063979e-09 8.772984106637997 0.10965967215597983 AIEPPPLDAVIEAEHTLR ddPTM_A549_PD325901_60min_R1 2 AIEPPPLDAVIEAEHTLR 18 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ; 159.04 3.9534999999999994e-41 3480700.0 192.67 218.94 361.1 322.2 154.98 271.97 208.28 266.01 392.35 348.54 226.87 False True 212.22971656384252 237.39084216999686 385.60641747069894 342.1015622307081 144.09473945197487 269.755166491366 216.20620937518922 260.7042218691921 375.8608939338779 326.53312491779144 198.96642824742182 1.0666609358837529 1.193120086946492 1.9380476438526788 1.7193933933683156 0.7242163450448432 1.3557823240205926 1.0866466834612376 1.3102925160067564 1.8890669006053702 1.6411468396655133 1.0 7.636381214076994 -5.536363341064819 24.9503205720831 1.3989328925197795 1.09827524458979 0.08545256344830987 0.35864260391241354 426.2987937980885 788774.4434273489 0.056731947020780917 0.21995000220823413 2.9082829614633614e-06 5.536363341064819 -0.3006576479299894 AIEPQKEEADENYNS(ph)VNTR ddPTM_A549_MK2206_60min_R1 4 AIEPQKEEADENYNSVNTR 19 1 Q12846;C9JFM5;Q12846-2 Q12846 STX4 Syntaxin-4 1 AIEPQKEEADENYNS(0.999)VNT(0.001)R;AIEPQKEEADENYNS(0.999)VNT(0.001)R;AIEPQKEEADENYNS(1)VNTR;AIEPQKEEADENYNS(1)VNTR 208.11 1.3770999999999997e-66 238016000.0 27014.8 28547.899999999998 26721.100000000002 24779.9 37704.2 29000.2 27197.9 26778.3 41944.4 42512.4 42604.3 True False 31574.237791552277 30000.866172060258 30510.553782169394 30850.976612411985 32157.962126451708 32068.98191522522 32139.406374680017 30574.20603010436 32444.060371443153 32908.81931385593 32024.47649113796 0.9859407943886209 0.9368105105593938 0.9527260747138986 0.9633561573114017 1.004168237858648 1.001389731510508 1.0035888138116438 0.9547136871562935 1.0131019746855596 1.027614591075757 1.0 14.966887366359547 -6.712103551647047 4.788146631504921 1.0017145192565815 0.9567402871031768 0.4970842535358686 0.019778561863515367 0.11287941229310688 5.525452724230903 0.002604117164526804 0.005446938647185945 1.940423154765477e-07 6.712103551647047 -0.04497423215340468 AIEPQKEEADENYNS(ph)VNTR ddPTM_A549_PD325901_60min_R1 2 AIEPQKEEADENYNSVNTR 19 1 Q12846;C9JFM5;Q12846-2 Q12846 STX4 Syntaxin-4 1 AIEPQKEEADENYNS(1)VNTR;AIEPQKEEADENYNS(1)VNTR 246.77 1.9583999999999997e-86 313730000.0 21643.8 22300.0 21685.6 23019.1 24075.2 23953.7 23861.2 24521.6 24144.6 25011.4 25419.8 True False 23841.062642676567 24179.299261856817 23157.31522210631 24440.937526830807 22384.241006931115 23758.62900902393 24769.251023349636 24032.49745117693 23129.886427108217 23432.17593552776 22293.325749388685 1.0694260206254924 1.0845981229390975 1.038755521828829 1.0963342931236275 1.0040781379397787 1.0657283384322067 1.1110612791377188 1.0780131112485958 1.0375251627829676 1.0510848044361576 1.0 14.44432423545816 -9.390169603559116 1.1562904803096128 1.0089154079666414 1.0674614959192232 0.1878348575845289 0.030612015802839652 0.276469895263961 0.7704095500454515 0.0070861332627583954 0.005640324175419117 4.072212160192932e-10 9.390169603559116 0.05854608795258187 AIFAGYK ddPTM_A549_MK2206_60min_R1 2 AIFAGYK 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 123.34 0.01736 4698600.0 4646.4 5433.200000000001 4364.5 4208.2 6990.3 4545.6 3990.4 4021.3 6974.2 6632.5 6701.4 False True 5430.5987264265705 5709.726672926478 4983.451728494649 5239.209188913275 5962.036129994419 5026.612374874925 4715.40402742576 4591.331589714756 5394.554835508885 5134.213643528695 5037.2574307690065 1.0780863994075274 1.1334990818713846 0.9893184529451091 1.0400916095553683 1.1835877383547246 0.9978867357802564 0.9361054288436256 0.9114744784869623 1.0709309400304625 1.0192478177048192 1.0 12.298422746967208 AIFAGYK ddPTM_A549_PD325901_60min_R1 2 AIFAGYK 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 123.34 0.01736 10307200.0 7383.6 7232.299999999999 7017.5 8550.1 9185.8 8346.5 6806.9 7810.799999999999 9126.8 7771.1 9036.2 False True 8133.177636480969 7841.791302759055 7493.749749655577 9078.220258314015 8540.621097289652 8278.528871273253 7065.940304378602 7655.007466545937 8743.23233530194 7280.431419775773 7924.804685191315 1.0262937649023742 0.9895248670812817 0.9456068694864835 1.1455449842540637 1.077707456090253 1.0446350667471873 0.8916232746508403 0.9659553478775906 1.1032741730076931 0.9186890666694095 1.0 12.95215966367713 -8.753177063607813 24.993103896562165 1.0487683606233424 1.0118439224676001 0.0 0.07816774323379848 491.5823913267181 1487012.1562043668 0.012872351986571464 0.014472649780844562 1.7653179467181057e-09 8.753177063607813 -0.03692443815574231 AIGALASS(ph)R ddPTM_A549_MK2206_60min_R1 2 AIGALASSR 9 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 AIGALAS(0.002)S(0.998)R;AIGALAS(0.002)S(0.998)R 122.96 6.1222e-09 17446000.0 3232.9 3669.6 3253.3 3293.2 5167.2 3746.7 2875.8 3704.1 5086.3 4780.8 4850.3 True False 3778.534483183636 3856.366965871128 3714.6668595054725 4100.034147837366 4407.1117249484505 4143.173307141824 3398.2956350418513 4229.167518330494 3934.261171152077 3700.8139595901966 3645.8366485299935 1.036397087265867 1.0577454059621734 1.0188791264148467 1.1245797722425401 1.208806688233112 1.136412216606676 0.9321030980398008 1.1599991787991106 1.0791106542687197 1.0150794773217198 1.0 11.832034207631255 -10.447488134040741 0.724773420190158 0.9978113994118286 1.0854930964644829 0.14145381679771507 0.07158953097662683 1.0956989802426336 1.0115938563647267 0.05398148973333742 0.014601938370631245 3.5687149972932716e-11 10.447488134040741 0.08768169705265427 AIGALASS(ph)R ddPTM_A549_PD325901_60min_R1 2 AIGALASSR 9 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 AIGALAS(0.007)S(0.993)R;AIGALAS(0.207)S(0.793)R 94.90899999999999 0.00093476 49675000.0 7635.5 8280.3 9069.7 9107.5 9890.4 9251.0 9818.4 10716.5 8742.4 9323.9 10635.8 True False 8410.650339041984 8978.109940715376 9685.224382536684 9670.049590366767 9195.732424027694 9175.662923159278 10192.04458483463 10502.751000568382 8374.987330514938 8735.18736277327 9327.664025891161 0.9016888168030295 0.9625250133146398 1.0383333228612253 1.0367064640755963 0.9858558797253782 0.9837042691171157 1.0926684919765735 1.1259786985697047 0.8978654577682214 0.9364817749145626 1.0 13.187300109552345 -8.807820414004476 24.999969855197246 0.9517698408034808 1.0160733501734753 0.2050752035266874 0.06197139915288285 170.96366471645007 92150.81614567648 0.01203013861229695 0.012807085031923418 1.556609175168996e-09 8.807820414004476 0.06430350936999452 AIGALASS(ph)RR ddPTM_A549_PD325901_60min_R1 2 AIGALASSRR 10 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 AIGALAS(0.196)S(0.804)RR;AIGALAS(0.338)S(0.662)RR 63.401 0.0027433 7478700.0 1322.9299999999998 1060.32 1182.45 1296.46 1326.27 1450.26 1003.4 1467.1399999999999 1264.1100000000001 1384.04 1766.52 True False 1457.2328797104071 1149.6768875933635 1262.6981676494822 1376.5393897257102 1233.1173705831127 1438.4495633921708 1041.5849360815484 1437.876741750935 1210.9838527609397 1296.6514781982553 1549.2492388929159 0.9406058387040015 0.7420864627404404 0.8150387529328713 0.8885202943261582 0.795945119498197 0.9284816976383208 0.6723159256323784 0.9281119562004323 0.7816585106901853 0.8369547298437497 1.0 10.59735354421209 -10.865896665044861 0.9793956061410153 1.0057287474097125 0.8273194185289001 0.006562541488229878 0.09341235530771676 0.4530748369301003 0.7293710516659321 0.05931959743956885 0.012611481291739111 1.3617686597888883e-11 10.865896665044861 -0.1784093288808124 AIGGIILT(ph)ASHNPGGPNGDFGIK ddPTM_A549_MK2206_60min_R1 1 AIGGIILTASHNPGGPNGDFGIK 23 0 A0A3B3ITK7;P36871;P36871-2 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 1 AIGGIILT(0.5)AS(0.5)HNPGGPNGDFGIK 53.475 0.003311 2578700.0 355.34 601.17 390.21 381.84 465.08 489.57 335.74 224.35 415.03 570.25 599.49 True False 415.31270477109507 631.7669851953196 445.5476455437958 475.39081714144913 396.6673480877505 541.3759724497353 396.7396121110478 256.15229954305937 321.02636766672185 441.43012894417495 450.6200879177054 0.9216471167324917 1.401994722682439 0.988743417104752 1.0549703173203133 0.880270007315324 1.201402216557652 0.8804303730540802 0.5684440317046835 0.7124102459572317 0.9796059713715897 1.0 8.815767817802767 -7.899880823340554 7.0019940275960275 0.8330303248992367 1.0752591406730343 0.33969025990435375 0.1722307889443954 0.222558739601094 13.683386799718205 0.028724069035002853 0.03978856662302614 1.2592709264599566e-08 7.899880823340554 0.24222881577379762 AIGGIILTAS(ph)HNPGGPNGDFGIK ddPTM_A549_MK2206_60min_R1 2 AIGGIILTASHNPGGPNGDFGIK 23 0 A0A3B3ITK7;P36871;P36871-2 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 1 AIGGIILT(0.005)AS(0.995)HNPGGPNGDFGIK;AIGGIILTAS(1)HNPGGPNGDFGIK 225.48 4.3064999999999983e-88 2052120000.0 14136.099999999999 13999.5 14713.6 15142.4 20020.4 16475.4 14324.1 13951.3 23934.0 20667.0 20114.4 True False 16521.92808553688 14712.014753300855 16800.209726745074 18852.28867976816 17075.425680863522 18218.81589251459 16926.60355584637 15928.93949906435 18512.98721474428 15998.310346145121 15119.439350801342 1.0927606310124989 0.9730529295400829 1.1111661839401903 1.2468907240776077 1.1293689722667204 1.2049928221411847 1.1195258741488485 1.0535403548690516 1.2244493188673082 1.058128543985806 1.0 13.88411702302279 -5.897033576240111 8.345106940433126 1.1235561243724508 1.0335828838131267 0.187078964547452 0.07609699717006355 0.38313485978015965 27.958432182623213 0.012871594196872005 0.04029392574655191 1.2675538647550838e-06 5.897033576240111 -0.0899732405593241 AIGGIILTAS(ph)HNPGGPNGDFGIK ddPTM_A549_PD325901_60min_R1 2 AIGGIILTASHNPGGPNGDFGIK 23 0 A0A3B3ITK7;P36871;P36871-2 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 1 AIGGIILT(0.001)AS(0.999)HNPGGPNGDFGIK;AIGGIILT(0.001)AS(0.999)HNPGGPNGDFGIK 251.82 1.3328999999999996e-110 3748900000.0 35590.0 44444.0 48128.0 47461.0 55182.0 47782.0 48992.0 54923.0 56347.0 58283.0 45856.0 True False 39203.07060002674 48189.45185623154 51394.25549717472 50392.5581782484 51306.206687565355 47392.879234071625 50856.41736945109 53827.517678740005 53978.93154197073 54603.00143336101 40216.00270513413 0.9748127104393178 1.1982655812304162 1.277955342155712 1.2530474136808005 1.275765944809214 1.178458226730258 1.2645816080313363 1.3384601665512663 1.3422251817950959 1.3577431311041308 1.0 15.295482070738421 -10.926950231285877 1.202102713730142 1.0009406970764565 1.2470103223554945 0.0 0.141441318727427 0.3399354929525835 0.8781937972736422 0.0682146346194519 0.016339906489271996 1.1831771361508967e-11 10.926950231285877 0.24606962527903797 AIGGIILTASHNPGGPNGDFGIK ddPTM_A549_MK2206_60min_R1 2 AIGGIILTASHNPGGPNGDFGIK 23 0 A0A3B3ITK7;P36871;P36871-2 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 0 ; 223.51 1.8299999999999997e-87 28419000.0 10091.599999999999 10597.0 10846.2 9948.8 13824.3 11011.5 11624.6 10671.6 16679.9 14986.0 14873.8 False True 11794.815364068174 11136.342036553384 12384.3542530871 12386.256446618601 11790.763782939473 12176.729621157878 13736.63934874036 12184.331980404346 12901.929282326948 11600.652191770989 11180.22496400335 1.054971201567375 0.9960749513009574 1.1077017048369466 1.1078718439475304 1.0546088134095564 1.089131002315512 1.2286550040779882 1.0898109849876805 1.1539954986475605 1.0376045409749157 1.0 13.448661597353693 -5.76765385322603 24.99249108273988 1.089588912708984 1.0255230726791482 0.1713533684077253 0.05864897896556074 223.81880186155038 900138.4059219228 0.009738121339545457 0.031389503807444805 1.707442733994684e-06 5.76765385322603 -0.06406584002983573 AIGNNSATS(ph)PR ddPTM_A549_MK2206_60min_R1 2 AIGNNSATSPR 11 0 A0A1B0GV57;Q9NYJ8-2;Q9NYJ8 A0A1B0GV57 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 1 AIGNNSAT(0.024)S(0.976)PR;AIGNNSAT(0.007)S(0.993)PR 126.66 9.4029e-07 48221000.0 7054.8 6188.6 6152.8 4557.2 5478.700000000001 4584.8 4226.7 4061.4 6005.0 9670.9 9545.4 True False 8245.477766699843 6503.573306352203 7025.359558960219 5673.714204580484 4672.790487590008 5069.960492856073 4994.63667870902 4637.115887515855 4644.877088014517 7486.236973268248 7175.013740362083 1.14919330681083 0.9064196309154391 0.9791423143122355 0.7907600472823851 0.6512587510883565 0.7066133496491702 0.6961152771892767 0.6462866909132701 0.6473683892597139 1.0433759772689244 1.0 12.808765879256441 -5.463102476703601 1.1273923974915514 0.7846584641252535 1.2147992311280102 0.39270306211499295 0.13649432228614636 1.1386313629031635 1.4689983138827232 0.02342033962404097 0.5282259147704153 3.4426868708121937e-06 5.463102476703601 0.4301407670027567 AIGNNSATS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AIGNNSATSPR 11 0 A0A1B0GV57;Q9NYJ8-2;Q9NYJ8 A0A1B0GV57 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 1 AIGNNSAT(0.001)S(0.999)PR;AIGNNSAT(0.002)S(0.998)PR 163.46 1.2789e-13 77954000.0 11408.1 12171.2 11906.8 12063.5 13317.7 13061.599999999999 11554.2 11826.7 10155.2 11739.5 12768.6 True False 12566.241913800659 13196.909738830114 12714.867049404918 12808.63499680368 12382.31069557082 12955.230660159674 11993.901403700836 11590.80719063334 9728.412259659275 10998.26596652439 11198.143146824308 1.1221719305637141 1.1784908949456177 1.1354442323780027 1.1438177587894196 1.10574677723086 1.1569088276777084 1.0710616257037398 1.0350651030854512 0.868752268309605 0.9821508639709967 1.0 13.450971906925314 -8.306247000919452 2.0987623725473266 0.9388392573178387 1.1386300934811622 0.7951412302888059 0.04032512840658124 0.1127040672608888 0.9701171512947759 0.008897206542057359 0.011250124041457274 4.940296323439628e-09 8.306247000919452 0.1997908361633235 AIGSGESET(ph)PPSTPTAQEPSSSGGFEFFR ddPTM_A549_PD325901_60min_R1 1 AIGSGESETPPSTPTAQEPSSSGGFEFFR 29 0 H0YFN7;Q4ADV7-2;Q4ADV7-3;Q4ADV7 H0YFN7 RIC1 RAB6A-GEF complex partner protein 1 1 AIGS(0.016)GES(0.07)ET(0.652)PPS(0.111)T(0.111)PT(0.035)AQEPS(0.002)S(0.002)S(0.001)GGFEFFR 46.034 0.015595 1996300.0 726.61 371.68 483.08 505.3 523.39 544.9 532.53 623.58 681.52 454.91 548.74 True False 800.3749122979892 403.0027780110733 515.8647137960265 536.5112333804368 486.6288919974782 540.4625150610191 552.7957205615977 611.1422077109535 652.8780844496407 426.1869049645737 481.2484587494613 1.663122027191085 0.8374110517845361 1.0719301109795065 1.114832107254073 1.0111801568403942 1.1230425889891207 1.1486701110649873 1.2699099531643696 1.356634130623845 0.8855860153236299 1.0 8.910638110089222 -7.9189120092511125 4.383609107897299 1.1818181441694058 1.1140436105483775 0.0 0.22355449747270015 0.9129026867798099 33.14692123057786 0.03377965114694439 0.04704383569338568 1.2052801128431159e-08 7.9189120092511125 -0.06777453362102825 AIGSTSKPQES(ph)PK ddPTM_A549_MK2206_60min_R1 6 AIGSTSKPQESPK 13 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGST(0.002)S(0.001)KPQES(0.997)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGS(0.002)T(0.011)S(0.009)KPQES(0.978)PK;AIGS(0.002)T(0.002)S(0.006)KPQES(0.991)PK 154.47 2.2033e-18 846005200.0 20270.4 22400.699999999997 20673.1 19435.2 28952.9 21821.6 20441.100000000002 22372.199999999997 30444.8 30308.5 31502.600000000002 True False 23691.54795630104 23540.79994887436 23604.856439074967 24196.82487247928 24693.966763674696 24130.74722799424 24154.983276115876 25543.52786198901 23549.10141035542 23461.78879983257 23679.63499247079 1.0005030889975306 0.9941369432577581 0.9968420732236962 1.0218411255145163 1.0428356168296693 1.019050641433742 1.0200741389719996 1.0787129054189757 0.9944875171362703 0.9908002723560779 1.0 14.531359222399301 -6.216528913070047 20.267089763098788 1.0108748524739657 0.9968582175471901 0.05906826569133683 0.024690278287502938 145.59969285942475 65702.67655829148 0.0038309367214853073 0.010135419084813036 6.073948243260731e-07 6.216528913070047 -0.014016634926775629 AIGSTSKPQES(ph)PK ddPTM_A549_PD325901_60min_R1 4 AIGSTSKPQESPK 13 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGST(0.001)S(0.001)KPQES(0.998)PK;AIGSTSKPQES(1)PK 148.72 9.333200000000001e-13 1443037400.0 10958.2 10792.7 10313.9 11211.7 12192.3 10627.8 11783.0 11380.2 10963.5 10787.399999999998 11486.8 True False 12070.66839699953 11702.238705983938 11013.863276519078 11904.221245381837 11335.954909151584 10541.250720435866 12231.408512905002 11153.212983405803 10502.74222159825 10106.281723010798 10073.996420824635 1.1982005842336256 1.1616282374086866 1.093296326148338 1.1816781293245073 1.1252689037806556 1.0463822181478384 1.21415652755451 1.1071289404421711 1.0425596538715585 1.0032048157292794 1.0 13.298348503085279 -8.775454341049581 2.3855258445123693 1.0172356311966007 1.1422913587640935 0.6107503158145835 0.04566569373313908 0.13910624714496467 1.5516173860041151 0.008218500965289362 0.00885837608837478 1.677048640672798e-09 8.775454341049581 0.12505572756749284 AIGSTSKPQES(ph)PKGK ddPTM_A549_MK2206_60min_R1 3 AIGSTSKPQESPKGK 15 2 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGS(0.097)T(0.091)S(0.091)KPQES(0.721)PKGK;AIGS(0.164)T(0.164)S(0.164)KPQES(0.509)PKGK;AIGS(0.019)T(0.019)S(0.019)KPQES(0.944)PKGK 65.107 0.0012663 281662000.0 3818.35 3803.13 4307.76 3689.26 4928.400000000001 3696.6800000000003 3540.95 3486.09 5335.5 5220.1 4481.51 True False 4462.79413030537 3996.6930725183843 4918.665143301662 4593.128865617174 4203.4388886120005 4087.8602239424135 4184.294780200794 3980.253933202874 4127.017769042704 4040.8757844830966 3368.6273836161986 1.3248108567931283 1.1864455807599479 1.4601392743003558 1.3635016113555667 1.2478194854842144 1.2135091710719645 1.2421364264126422 1.1815655102019917 1.2251333552398953 1.1995615199640288 1.0 11.71794514009137 -12.889394633780311 0.16145676995923317 0.4835192196752055 1.371013726679367 0.3366461615091779 0.09103062505943686 11.306180130715962 0.2202928442675894 2.14439319825806 0.12943680035136215 1.2900465041630496e-13 12.889394633780311 0.8874945070041614 AIGSTSKPQES(ph)PKGK ddPTM_A549_PD325901_60min_R1 2 AIGSTSKPQESPKGK 15 2 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGS(0.014)T(0.103)S(0.091)KPQES(0.792)PKGK;AIGS(0.006)T(0.045)S(0.045)KPQES(0.903)PKGK 72.184 0.00040081 41865000.0 3214.5 3023.8999999999996 3056.7 3102.2 3456.8 2768.2 3337.7 3326.5 3141.3999999999996 3209.0 3193.3 True False 3540.833673610173 3278.7346653779746 3264.1460434303085 3293.815848392621 3214.0062933126005 2745.6566969937835 3464.7179999595214 3260.1503479112316 3009.3778825127683 3006.3831923486323 2800.544343996529 1.2643376567846845 1.1707490625551182 1.165539853145905 1.1761341524384388 1.147636280140467 0.9804010791257753 1.2371587714319783 1.1641130964056867 1.0745689097778122 1.0734995854621463 1.0 11.451491556852872 -2.000002806362789 0.030820525877375153 0.3968029509400688 2.2206757753289077 0.37603230472095595 0.06801293142246996 556.7909849633328 1.2792368403280032 23.594791815476007 60.019627749606336 0.009999935381317548 2.000002806362789 1.823872824388839 AIGSTSKPQES(ph)PKGKR ddPTM_A549_MK2206_60min_R1 1 AIGSTSKPQESPKGKR 16 3 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGS(0.004)T(0.004)S(0.004)KPQES(0.987)PKGKR 41.136 0.016512 13945000.0 1178.0 1425.5 2036.5 1324.8 1972.5 1529.0 1564.2 1008.8 2362.6 2685.7 2743.8 True False 1376.8176006651374 1498.0518611972116 2325.306322620999 1649.3760594725316 1682.3478629549509 1690.797765131943 1848.3948926672465 1151.8004893204302 1827.4748722969362 2078.9985047003424 2062.4387349723925 0.6675677571986482 0.726349750804726 1.127454737535331 0.7997212385048663 0.8157080423421501 0.8198050863094247 0.8962180846026385 0.5584653108912095 0.8860747431226841 1.0080292177639747 1.0 11.010135549201502 -9.512498420083288 1.5808486433150355 0.9699992126538759 0.8135325711395707 0.22290357337297095 0.13705412349560805 0.4007375743586258 2.0371963470256924 0.03174073482161683 0.02543062471863803 3.072568542921693e-10 9.512498420083288 -0.15646664151430523 AIGSTSKPQES(ph)PKGKR ddPTM_A549_PD325901_60min_R1 1 AIGSTSKPQESPKGKR 16 3 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 AIGS(0.003)T(0.003)S(0.003)KPQES(0.992)PKGKR 47.397 0.0046072 19821000.0 1296.0 1299.5 1514.6 1717.7 1358.9 2284.4 1884.4 1944.0 1783.9 1602.2 1776.6 True False 1427.5689659352254 1409.0134255956461 1617.3898640296882 1823.798427820259 1263.455551950501 2265.7966037904066 1956.1118731832462 1905.2253949615017 1708.9288866793552 1501.036818566837 1558.0894627952998 0.9162304219515653 0.9043212596199689 1.0380596895431153 1.170535114555144 0.8109005176659054 1.4542147019757392 1.255455427876312 1.2227958923125124 1.09681050253266 0.9633829471344301 1.0 10.605562357487623 -5.867480562090536 3.8164603548002294 1.0936905321060435 0.9090002404813404 0.18910398422724273 0.16093582056171135 0.3045342749512525 8.252124240774021 0.022306695833907354 0.07910822665451146 1.3568112563400507e-06 5.867480562090536 -0.18469029162470307 AIGSTSKPQESPK ddPTM_A549_MK2206_60min_R1 2 AIGSTSKPQESPK 13 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 0 ; 74.987 0.0017084 3192900.0 1548.9 1446.8 1912.6 1567.9 2451.6 2001.4 2004.0 1821.2 2485.9 2579.9 2587.8 False True 1810.3164530307567 1520.4359402175571 2183.8354395506603 1952.0355703857063 2090.9728876148815 2213.1868195782026 2368.1008598038356 2079.360677191086 1922.8476191665745 1997.098798181633 1945.1778403533629 0.9306688650647454 0.7816436670599503 1.1226919175441268 1.0035255028563854 1.074952039981616 1.1377812216779897 1.217421261273285 1.0689822976871601 0.9885202161347202 1.026692139274442 1.0 10.925686346129039 -5.759124588969273 24.999994724191605 1.036201482854839 0.856156256382652 0.4834837366637855 0.07923632649467222 45.412508329594004 490425.95627001487 0.012296633795588235 0.043490548768856656 1.7413072612447853e-06 5.759124588969273 -0.1800452264721869 AIGSTSKPQESPK ddPTM_A549_PD325901_60min_R1 2 AIGSTSKPQESPK 13 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 0 ; 66.498 0.0049318 6658300.0 4295.5 3982.1000000000004 3305.4 3610.7 4768.4 4258.9 3513.6000000000004 4755.1 4534.8 4229.7 5138.8 False True 4731.57599782003 4317.685542181168 3529.724320984902 3833.72473850533 4433.484034086962 4224.216930433792 3647.311970715696 4660.255800196214 4344.218126191793 3962.6360201548814 4506.760177537145 1.0498841321540529 0.958046439591267 0.7832066011805905 0.8506609154872724 0.9837408380824412 0.9373067933564291 0.8092979939103127 1.0340589728790388 0.9639337251279748 0.8792648963008242 1.0 12.137874965271504 -8.289501372240496 24.995628412651875 0.986324597266251 0.9088227728136118 0.09621162806229744 0.08103953466933707 895.1099142030663 797297.5119311911 0.012267953270312774 0.014833043526953315 5.1345055515042285e-09 8.289501372240496 -0.0775018244526392 AIGSTSKPQESPKGK ddPTM_A549_MK2206_60min_R1 1 AIGSTSKPQESPKGK 15 2 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 0 36.638000000000005 0.050316 3630300.0 1063.9 1189.2 1212.5 1020.1 1534.6 1207.5 1125.7 1004.8 1698.2 1654.6 2101.1 False True 1243.4603101423097 1249.725200516117 1384.4507322258585 1270.0245457940296 1308.8623728723273 1335.2768485263707 1330.2251187031832 1147.2334770709435 1313.5604114681512 1280.8247108303935 1579.3388825900195 0.7873296376412329 0.791296417945871 0.8766014358840097 0.8041494829224155 0.8287406757983903 0.8454656965936266 0.8422670608360475 0.7264010844775446 0.8317153626421153 0.8109878918005989 1.0 10.62510505166494 -10.395259272668804 0.7526426010027077 1.0011834226978982 0.8152745626625244 0.0 0.06624297284323062 0.2526091865631815 0.25943875895710833 0.026334621815995822 0.00781895791731637 4.0247668506127494e-11 10.395259272668804 -0.18590886003537377 AIGSVPERS(ph)PAGVDLSLTGLPPPVSR ddPTM_A549_MK2206_60min_R1 2 AIGSVPERSPAGVDLSLTGLPPPVSR 26 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 AIGS(0.044)VPERS(0.927)PAGVDLS(0.022)LT(0.007)GLPPPVSR;AIGS(0.127)VPERS(0.862)PAGVDLS(0.008)LT(0.002)GLPPPVSR 52.92 0.0018506 3887400.0 1179.3600000000001 1218.69 1175.19 879.2 1629.45 1632.8899999999999 1205.9099999999999 1295.92 1522.63 1750.15 1587.93 True False 1378.4071354163311 1280.716115554143 1341.849613199593 1094.6040394687873 1389.7600635193621 1805.6813359753414 1425.0082374481249 1479.6206285885526 1177.756736140473 1354.789899468036 1193.6031563615102 1.1548286614942973 1.072983184342593 1.124200791567933 0.9170585999499998 1.1643401377689062 1.5127987274092372 1.1938710364942504 1.2396252646473527 0.9867238787560331 1.135042155550154 1.0 10.22110754043245 -8.774212944928061 24.774328963352406 0.9937306968691724 1.1708123877512213 0.12531714118808002 0.14100627546026415 212.1679836972995 411498.3405989583 0.02463877919364805 0.026314635644522976 1.6818492081411491e-09 8.774212944928061 0.17708169088204895 AIGSVPERS(ph)PAGVDLSLTGLPPPVSR ddPTM_A549_PD325901_60min_R1 2 AIGSVPERSPAGVDLSLTGLPPPVSR 26 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 AIGS(0.035)VPERS(0.965)PAGVDLSLTGLPPPVSR;AIGS(0.012)VPERS(0.988)PAGVDLSLTGLPPPVSR 71.472 2.4226999999999997e-05 6247200.0 2170.5 1942.06 2449.6 2187.87 2840.6 2233.1 2501.2 2249.16 2390.6 2349.32 2466.5 True False 2390.8475621623516 2105.724211860163 2615.8445866414377 2323.0097608867145 2641.0860555380054 2214.9143739819465 2596.3845347091556 2204.298739368112 2290.1313955354385 2200.983534262541 2163.1361364317263 1.1052691145487747 0.9734589406535138 1.2092833837802237 1.0739082583672765 1.2209523067256864 1.0239366522883913 1.2002871622273892 1.0190291319363223 1.0587088611598905 1.017496539951132 1.0 11.078908748470766 -9.045929397416245 0.781435181789948 1.013329316650167 1.1107120540286748 0.2065819721098795 0.0762717750069398 0.5858986234291205 0.7611441545240981 0.01995646259256955 0.01733813044499503 8.996438233506645e-10 9.045929397416245 0.09738273737850789 AIGVKPPR ddPTM_A549_PD325901_60min_R1 1 AIGVKPPR 8 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 69.998 0.006876600000000001 4514500.0 1669.2 1640.2 1961.6 1714.2 1974.0 2046.0 1611.1 2022.7 1747.8 2136.6 2252.0 False True 1838.655955199907 1778.4254102823998 2094.72597205905 1820.0822407693345 1835.3530499303033 2029.3380543491387 1672.4112921277485 1982.3556617225477 1674.3460441382233 2001.6947113655624 1975.0182766041962 0.9309564255583763 0.9004602293302247 1.0606109304774012 0.9215521002158747 0.9292840839356533 1.0275034304180408 0.8467826915522303 1.00371509732607 0.8477623037580482 1.0135069305825528 1.0 10.947650288556504 -7.746141670039587 24.998720656554337 0.9276120308961975 0.9601367396549597 0.0 0.06928582099100879 697.5536061731244 1139903.7775069957 0.011094509208706286 0.016421297845012436 1.7941482670632234e-08 7.746141670039587 0.03252470875876223 AIKT(ph)PK ddPTM_A549_PD325901_60min_R1 2 AIKTPK 6 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 AIKT(1)PK;AIKT(1)PK 50.607 0.038063 50295000.0 21650.0 20755.2 19712.1 19417.4 21812.0 18061.0 16967.300000000003 18898.0 22156.0 25318.0 26761.0 True False 23847.892062112376 22504.313544380737 21049.88164448673 20616.76869788501 20280.000367314977 17913.91720410546 17612.999886362813 18521.0645648058 21224.860369565442 23719.417159203083 23469.566651955993 1.0161198293844447 0.9588721376116754 0.896901163819844 0.8784469267636339 0.8640977768383639 0.7632828279175953 0.7504612312428409 0.7891523878333827 0.904356722231875 1.0106457230741526 1.0 14.518503583368528 -9.785568700498324 1.1339890962297139 0.9828749995618927 0.864673343126668 0.30965163814892993 0.07676577514670266 0.43375779555333344 1.1372385416586126 0.02529769057434098 0.016303096347514996 1.638442857566976e-10 9.785568700498324 -0.11820165643522473 AIKVEQATKPS(ph)FESGR ddPTM_A549_MK2206_60min_R1 1 AIKVEQATKPSFESGR 16 2 P38159;P38159-2;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 AIKVEQAT(0.007)KPS(0.977)FES(0.016)GR 80.303 6.0255e-05 25906000.0 3822.1 5270.5 5136.0 4573.9 6496.9 5062.6 4428.4 4505.9 7268.6 6900.2 7666.9 True False 4467.177038626677 5538.745937874366 5864.362029453202 5694.505705330176 5541.2146163913885 5598.320971718102 5232.982957861929 5144.625123740011 5622.273705569077 5341.440027602973 5762.997134324602 0.7751482318150087 0.961087748054812 1.0175889199258608 0.9881153109401204 0.9615161151803687 0.9714252568987614 0.9080315044222579 0.8926995804142351 0.9755815549660138 0.9268510643167215 1.0 12.492603587000476 -7.749428967058967 0.01006509074424943 1.9078124384055812 5.898045087542866e-06 0.0 0.06440275160470145 2194.7627835954363 10.42086937662245 967.4276082207799 1006.9847201851429 1.7806191220171943e-08 7.749428967058967 -1.9078065403604938 AIKVEQATKPS(ph)FESGR ddPTM_A549_PD325901_60min_R1 2 AIKVEQATKPSFESGR 16 2 P38159;P38159-2;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 AIKVEQATKPS(0.862)FES(0.138)GR;AIKVEQAT(0.019)KPS(0.97)FES(0.011)GR 102.66 2.2958000000000002e-07 83605000.0 15764.7 16659.4 18077.5 18488.800000000003 19237.0 21764.0 20493.3 20420.5 22285.0 20468.3 21824.0 True False 17365.120738641242 18063.346104169384 19304.34785883842 19630.811184888622 17885.85948404723 21586.761199831213 21273.183745864044 20013.19710792765 21348.438948175015 19175.92804485807 19139.786353734456 0.9072787134456728 0.9437590248046294 1.0085978757579943 1.0256546662579835 0.9344858481430975 1.1278475527820777 1.1114640128526476 1.0456332551498297 1.1153958854932369 1.001888301700743 1.0 14.224287105500448 -7.250454179662403 24.976246632145333 1.0643553686037368 0.9687411075724391 0.5103566055624079 0.05013867628269043 583.1892907258961 1325954.7505432714 0.0084324694409729 0.014523381546383392 5.6175354316391163e-08 7.250454179662403 -0.09561426103129766 AILDAEPGPRPALQPS(ph)PSIR ddPTM_A549_MK2206_60min_R1 2 AILDAEPGPRPALQPSPSIR 20 1 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 AILDAEPGPRPALQPS(0.855)PS(0.145)IR;AILDAEPGPRPALQPS(0.585)PS(0.415)IR 110.14 1.4388e-10 50131000.0 3236.5 4390.2 4326.3 3809.9 6108.799999999999 4302.1 3922.4 4368.9 6674.200000000001 5930.1 5722.299999999999 True False 3782.742075172086 4613.642427939669 4939.834394085554 4743.3256710329115 5210.203612278429 4757.345366497144 4635.049307632019 4988.204954195109 5162.504356507326 4590.486291366681 4301.294982554312 0.8794426075204252 1.0726170715219978 1.1484528296992194 1.1027668853848525 1.211310461944734 1.106026298078261 1.077593916816072 1.1596984104616972 1.2002209514683382 1.0672335447778645 1.0 12.070555359277629 -5.2780367673683175 3.4049472038171213 1.1113613642420554 0.8538043435663505 0.5803236308457 0.058223792121531594 0.21157607313719956 4.143819152660205 0.010678908462710895 0.1376261955500808 5.271852280351723e-06 5.2780367673683175 -0.25755702067570496 AILDAEPGPRPALQPS(ph)PSIR ddPTM_A549_PD325901_60min_R1 1 AILDAEPGPRPALQPSPSIR 20 1 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 AILDAEPGPRPALQPS(0.662)PS(0.338)IR 120.33 6.3609e-15 50434000.0 2591.3 2762.6 2663.2 2593.8 3183.2 2593.6 2166.6 2679.6 3209.0 3284.5 2696.1 True False 2854.366868385765 2995.4139973455435 2843.9407671225845 2754.0131350527936 2959.6230134438424 2572.4785815053388 2249.0511486090127 2626.153275894466 3074.1368895980986 3077.116109463723 2364.4967919860437 1.2071773064188673 1.2668293767612029 1.202767868732795 1.1647354077142047 1.251692547638403 1.087960275617292 0.9511753859136923 1.1106605366500182 1.3001230959658006 1.3013830764723175 1.0 11.207317469093049 -7.2610729145613755 24.758855042516252 1.1231966719616724 1.2174411204100044 0.17015875723080953 0.10266085484777242 50.220127160948685 3392913.423559773 0.018331071909132444 0.030483209399349148 5.481849213413871e-08 7.2610729145613755 0.09424444844833202 AILDAEPGPRPALQPSPS(ph)IR ddPTM_A549_PD325901_60min_R1 1 AILDAEPGPRPALQPSPSIR 20 1 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 AILDAEPGPRPALQPS(0.393)PS(0.607)IR 141.36 2.3947e-21 49913000.0 3272.8 4375.3 4134.1 3746.8 4030.4 4128.4 3899.0 4345.6 4041.9 4157.4 4418.0 True False 3605.0522466919792 4744.021886116684 4414.664886362826 3978.2313263998058 3747.3186081251733 4094.7796791666556 4047.378578614665 4258.923598942748 3872.0329990858713 3894.901054493677 3874.6140080094765 0.9304287444477649 1.2243856746272004 1.1393818525502086 1.0267426169874303 0.9671463016390376 1.056822607542857 1.0445888468497908 1.0991865486830015 0.9993338668269227 1.005235888385853 1.0 11.91983687983155 -7.478054276294591 0.36088862546430966 0.9945368112970805 1.1010642954078875 0.06560530062699532 0.07676663136982086 2.324190630529808 0.5954121868655247 0.03203190771139266 0.09164585182047696 3.326179815023735e-08 7.478054276294591 0.10652748411080704 AILVDLEPGTMDSVR ddPTM_A549_MK2206_60min_R1 4 AILVDLEPGTMDSVR 15 0 A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q5JP53;P07437;Q9BVA1;Q13885 A0A0B4J269;Q5JP53;Q9BVA1 TUBB3;TUBB;TUBB2B;TUBB2A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ;;; 129.84 7.8688e-09 23104200.0 11606.099999999999 12859.1 13527.300000000001 11785.499999999998 22496.399999999998 16925.699999999997 15317.800000000001 15410.8 24958.9 18331.699999999997 18365.3 False True 13564.925938098173 13513.573264343091 15445.674548485653 14672.948029071204 19187.20936080088 18716.766339629627 18100.845983185234 17595.32809359565 19305.749001173273 14190.556238081412 13804.689153505531 0.9826317555765844 0.9789118113471962 1.11887159332113 1.0628959381780203 1.389905208834675 1.3558267144955403 1.311209965100065 1.2745906769749706 1.3984921200685505 1.0279518850649305 1.0 13.752870782017622 -6.274576200980298 1.8813232694625068 1.2309998947216296 0.9952940091522919 0.3597426886633156 0.1322904771537496 0.393293614997673 2.6502415456057156 0.024326062163113987 0.08131175380719864 5.314027518026425e-07 6.274576200980298 -0.2357058855693377 AILVDLEPGTMDSVR ddPTM_A549_PD325901_60min_R1 2 AILVDLEPGTMDSVR 15 0 A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q5JP53;P07437;Q9BVA1;Q13885 A0A0B4J269;Q5JP53;Q9BVA1 TUBB3;TUBB;TUBB2B;TUBB2A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ; 119.74 1.7909e-06 4685000.0 4908.1 5565.4 4672.2 5140.299999999999 5283.2 5447.2 5646.1 6073.6 6019.5 5770.799999999999 6061.6 False True 5406.36669884775 6034.415789772997 4989.283588220985 5457.804656531681 4912.126258050549 5402.839809213407 5860.965425164468 5952.457283352972 5766.521348375119 5406.43070314911 5316.061627648309 1.016987213001778 1.1351290132508247 0.9385300505683034 1.0266631651044413 0.9240160483661566 1.0163237726804695 1.1025014071850048 1.1197118657155576 1.0847356092307157 1.0169992527985003 1.0 12.376142114142096 -7.5494084506037105 24.66285738557306 1.0528351773151887 1.008231907966471 0.15876677693769226 0.060679886374934724 356.3054353076636 331231.16493882355 0.009999247476481099 0.014831531287321915 2.822224446079783e-08 7.5494084506037105 -0.04460326934871772 AIPADS(ph)PTDQEPK ddPTM_A549_MK2206_60min_R1 1 AIPADSPTDQEPK 13 0 H7C3Z2;Q9Y5Y0-2;Q9Y5Y0 H7C3Z2 FLVCR1 Feline leukemia virus subgroup C receptor-related protein 1 1 AIPADS(0.937)PT(0.063)DQEPK 200.16 1.6152e-30 11865000.0 2905.3 3454.7 3239.3 3135.4 4599.4 3166.9 2423.5 3458.6 4663.6 4454.9 4863.9 True False 3395.643612234655 3630.52947378324 3698.681448989053 3903.5731407534545 3922.8343527883385 3502.019255981917 2863.8185797078813 3948.8671415182803 3607.3020462388827 3448.534995937578 3656.059393189087 0.928771457750505 0.9930170939089756 1.0116579221550304 1.06769959701023 1.0729678954604045 0.9578671677232232 0.7833074553008958 1.0800883456310004 0.9866639620130255 0.9432382314034317 1.0 11.836073792028355 -4.311820864084721 16.000839656082064 0.9913630334540202 0.9942337170210446 0.0 0.08062985060227722 0.0 0.0 0.009883347431670315 0.0 4.877296252316536e-05 4.311820864084721 0.002870683567024357 AIPADSPT(ph)DQEPK ddPTM_A549_MK2206_60min_R1 1 AIPADSPTDQEPK 13 0 H7C3Z2;Q9Y5Y0-2;Q9Y5Y0 H7C3Z2 FLVCR1 Feline leukemia virus subgroup C receptor-related protein 1 1 AIPADS(0.292)PT(0.708)DQEPK 180.09 9.419899999999999e-23 10395000.0 2400.0 2224.6 1763.8 2103.1 2325.0 1815.2 2681.7 2759.3 2885.2 2892.5 3182.9 True False 2805.0613256335587 2337.822637965149 2013.9333620618295 2618.3595944117474 1982.9955799088764 2007.283259167758 3168.9301775129475 3150.439225001847 2231.706806717649 2239.0822410715055 2392.498086428904 1.1724403632942735 0.9771471296993325 0.8417701035940519 1.0944040495848293 0.8288389408364124 0.8389905390327286 1.3245277793483894 1.3167990573836832 0.9327935597427142 0.9358762933907334 1.0 11.224302055475526 AIPGDQHPES(ph)PVHTEPMGIQGR ddPTM_A549_MK2206_60min_R1 7 AIPGDQHPESPVHTEPMGIQGR 22 0 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 AIPGDQHPES(0.985)PVHT(0.015)EPMGIQGR;AIPGDQHPES(0.997)PVHT(0.003)EPMGIQGR;AIPGDQHPES(0.999)PVHT(0.001)EPMGIQGR;AIPGDQHPES(0.99)PVHT(0.01)EPMGIQGR;AIPGDQHPES(0.999)PVHT(0.001)EPMGIQGR;AIPGDQHPES(0.999)PVHT(0.001)EPMGIQGR;AIPGDQHPES(1)PVHTEPMGIQGR 158.29 7.7048e-33 240065900.0 9126.03 10789.71 10352.810000000001 9169.830000000002 15170.87 10551.52 9172.64 8898.32 14901.120000000003 13694.630000000001 16546.239999999998 True False 10666.280753988176 11338.860152422432 11820.994132037267 11416.438761649308 12939.255119729962 11668.074842867883 10839.189955424677 10159.684109962107 11526.040112198983 10601.003571666397 12437.351955007507 0.8576006204997467 0.9116779997415123 0.9504430022403537 0.9179155501065352 1.0403545036385642 0.938147837664922 0.8715030333334436 0.8168687471991681 0.9267278238884594 0.8523521413574083 1.0 13.602391732538587 -10.244067317708476 1.0333743322779991 0.9933384138733269 0.9176222355668913 0.0 0.06901620490250784 0.5520352972581731 1.1663354765648488 0.023935990456144064 0.010721256626067394 5.7007590095827016e-11 10.244067317708476 -0.07571617830643562 AIPGDQHPES(ph)PVHTEPMGIQGR ddPTM_A549_PD325901_60min_R1 8 AIPGDQHPESPVHTEPMGIQGR 22 0 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 AIPGDQHPES(0.992)PVHT(0.008)EPMGIQGR;AIPGDQHPES(0.991)PVHT(0.009)EPMGIQGR;AIPGDQHPES(0.999)PVHT(0.001)EPMGIQGR;AIPGDQHPES(0.842)PVHT(0.158)EPMGIQGR;AIPGDQHPES(0.981)PVHT(0.019)EPMGIQGR;AIPGDQHPES(1)PVHTEPMGIQGR;AIPGDQHPES(1)PVHTEPMGIQGR;AIPGDQHPES(0.997)PVHT(0.003)EPMGIQGR 172.74 2.1591999999999998e-40 412554000.0 28218.2 29788.4 27723.4 31656.0 34429.50000000001 33487.2 31031.9 31549.899999999998 34257.5 36451.0 41503.100000000006 True False 31082.89089085909 32298.773010398898 29604.876638347203 33611.319224007755 32011.29069532695 33214.49134584576 32212.83593580725 30920.612494082263 32817.77640866529 34149.477639233424 36398.48180982756 0.853961191383173 0.8873659395782342 0.8133547105899871 0.9234264055192745 0.8794677443575113 0.9125240860149798 0.885004932461491 0.8495028077169341 0.9016248694143204 0.9382115940344824 1.0 15.151590656041801 -10.490749115314571 0.43166086870811743 1.0271521279553804 0.8713833492420215 0.47627371473352575 0.03441128504604021 0.6929010652823757 0.18827571844571495 0.046947649760588635 0.008428175497533072 3.2303597077765844e-11 10.490749115314571 -0.1557687787133588 AIPNGFGT(ph)SPLTPSAR ddPTM_A549_PD325901_60min_R1 1 AIPNGFGTSPLTPSAR 16 0 J3QSD2;J3QRZ1;A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2 J3QSD2 NDEL1 Nuclear distribution protein nudE-like 1 1 AIPNGFGT(0.559)S(0.401)PLT(0.038)PS(0.002)AR 57.328 0.0094144 3009800.0 2239.8 2345.1 1963.3 2158.9 3001.6 2537.8 2627.3 2452.1 2276.8 3206.1 3184.4 True False 2467.182847146387 2542.7298071291652 2096.5413442819786 2292.250349782356 2790.7779709578513 2517.1329982049097 2727.283339213724 2403.1909418647633 2181.114013785278 3003.6662988435505 2792.73898757478 0.8834276522522047 0.9104788590849576 0.7507115249974073 0.8207893254546321 0.9992978160058447 0.9013133735031905 0.976562203395206 0.860513980202532 0.7809945804062992 1.075527040732131 1.0 11.44746502873185 -11.091366823039884 1.4390536592250038 0.9996059372454431 0.8660131545170666 0.3761557559014064 0.07563778603488609 0.4387658986122134 1.631330282355421 0.055577015663488216 0.01232233465556659 8.10276375877394e-12 11.091366823039884 -0.1335927827283765 AIPNGFGTS(ph)PLTPSAR ddPTM_A549_PD325901_60min_R1 1 AIPNGFGTSPLTPSAR 16 0 J3QSD2;J3QRZ1;A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2 J3QSD2 NDEL1 Nuclear distribution protein nudE-like 1 1 AIPNGFGT(0.153)S(0.746)PLT(0.098)PS(0.003)AR 82.65100000000001 0.00019214 2716300.0 2040.3 2005.8 2473.8 2429.2 2617.4 2716.2 2557.3 2909.6 2865.2 2574.4 2583.5 True False 2247.4297540105267 2174.835805355712 2641.68694416786 2579.246166886516 2433.562853539805 2694.0801677532395 2654.619450908254 2851.5657454629554 2744.7856080013944 2411.851944650148 2265.7458781558366 0.9919160730592532 0.9598763154877196 1.165923755897115 1.1383651590203256 1.0740669891543884 1.189047807049764 1.1716315922723575 1.2585549743045044 1.2114269453004427 1.0644847544038045 1.0 11.145770344901136 -5.756175550003989 24.98871625817535 1.1271687076143593 0.9758961347665177 0.4379126420512627 0.07085794201081616 122.61691515878411 582073.1313316713 0.012826180566749126 0.04686690399543825 1.7531716935973904e-06 5.756175550003989 -0.15127257284784157 AIPTVNHSGTFS(ph)PQAPVPTTVPVVDVR ddPTM_A549_PD325901_60min_R1 2 AIPTVNHSGTFSPQAPVPTTVPVVDVR 27 0 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AIPTVNHS(0.001)GT(0.043)FS(0.956)PQAPVPTTVPVVDVR;AIPTVNHSGT(0.004)FS(0.996)PQAPVPTTVPVVDVR 213.08 1.1030999999999998e-81 46058000.0 3507.9 3134.8 3406.5 3525.0 4372.200000000001 4163.9 4122.9 3969.5 3377.7 3600.8 4235.4 True False 3864.019425620509 3398.980597581559 3637.68557494859 3742.7312441441536 4065.1117552711607 4129.990578936642 4279.7992156374485 3890.325208487494 3235.7470152681517 3373.444873483628 3714.472650412704 1.0402605670528196 0.9150641066650224 0.9793275970263013 1.0076077000400878 1.0943980849662465 1.1118645814979338 1.1521956461738743 1.0473425367811637 0.871118815455173 0.9081894500175723 1.0 11.858941688255522 -8.73610658896038 24.576275405202587 0.9391394414225581 1.043488042635845 0.3690583044229053 0.06761871294630195 188.86773586790136 183227.3858395432 0.013753754768147596 0.01559202394746166 1.8360876567732622e-09 8.73610658896038 0.10434860121328693 AIPVAQDLNAPSDWDS(ph)R ddPTM_A549_MK2206_60min_R1 1 AIPVAQDLNAPSDWDSR 17 0 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 AIPVAQDLNAPS(0.035)DWDS(0.965)R 66.965 0.0020818 2203700.0 896.92 1466.7 1181.6 1068.2 1818.0 1248.8 1148.6 1407.8 1564.5 1839.3 2186.6 True False 1048.2981684113545 1541.348765217784 1349.1686475860415 1329.9090479533206 1550.574608290038 1380.9471871136495 1357.285752280781 1607.3599612066819 1210.143247993124 1423.8008525506714 1643.6068729100652 0.6378034709451565 0.9377843270323946 0.8208584849717072 0.8091405979573867 0.9433974959867926 0.8401931203102313 0.8257970775442535 0.9779467266164402 0.7362729299437168 0.8662660615611691 1.0 10.68264955306962 -11.059504010853285 1.3597103280340612 1.0002441512792426 0.8322457175007401 0.07001272447724904 0.09926044221656256 0.4167815711396082 1.3712948470183373 0.06395112515429467 0.014102816960988153 8.71958848421319e-12 11.059504010853285 -0.16799843377850254 AIPVS(ph)PSAVEEDEDEDGHTVVATAR ddPTM_A549_MK2206_60min_R1 4 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.862)PS(0.138)AVEEDEDEDGHTVVATAR;AIPVS(0.969)PS(0.031)AVEEDEDEDGHTVVATAR;AIPVS(0.838)PS(0.162)AVEEDEDEDGHTVVATAR;AIPVS(0.959)PS(0.041)AVEEDEDEDGHTVVATAR 346.02 2.1659999999999988e-256 483377200.0 12549.05 13353.08 11160.54 10683.93 14991.68 12252.529999999999 11975.210000000001 11445.41 17164.0 15097.23 18222.9 True False 14667.022845184072 14032.694736383919 12743.27239178226 13301.493329619838 12786.423731358409 13549.084592028825 14150.95064737101 13067.831917598083 13276.381405275792 11686.755257518396 13697.651003545609 1.0707692027915987 1.0244599408140553 0.9303253812265834 0.9710784225833154 0.9334756541868872 0.9891538767137279 1.0330932393961612 0.9540199202195692 0.9692451210677822 0.8531941173339359 1.0 13.741640887618646 -5.534866133528996 7.149257220488543 0.9792324112661761 1.0599013269530757 0.29072890808223306 0.047411939525082325 0.07498720097674012 20.677072560031206 0.003981576442986978 0.016787025595248344 2.9183264172216254e-06 5.534866133528996 0.0806689156868996 AIPVS(ph)PSAVEEDEDEDGHTVVATAR ddPTM_A549_PD325901_60min_R1 1 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.866)PS(0.134)AVEEDEDEDGHTVVATAR 315.94 8.506399999999995e-210 252510000.0 8395.0 9143.0 9122.7 9491.6 11440.0 9575.1 8829.1 9697.1 10686.0 11098.0 12212.0 True False 9247.254219927643 9913.512697361291 9741.821281251581 10077.874575012378 10636.49386585749 9497.12356021429 9165.0962319689 9503.68373327221 10236.904581565996 10397.270386003469 10710.001418246195 0.8634223151617395 0.9256313150876004 0.9096003726624009 0.9409778936016864 0.9931365506391556 0.8867527826872577 0.8557511688424895 0.8873653104360163 0.9558266317430917 0.9708000942268842 1.0 13.386671050683054 -9.157630954959147 1.8472306908922544 0.9853092819879189 0.9105611597466822 0.3890531810895803 0.03745330668854421 0.2256730127123866 1.5887254005175455 0.008230993469858332 0.007702232850689795 6.956151707970526e-10 9.157630954959147 -0.07474812224123673 AIPVSPS(ph)AVEEDEDEDGHTVVATAR ddPTM_A549_PD325901_60min_R1 2 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.464)PS(0.536)AVEEDEDEDGHTVVATAR;AIPVS(0.289)PS(0.711)AVEEDEDEDGHTVVATAR 331.46 2.6253999999999986e-232 255092100.0 7239.8 7980.18 8124.3 8484.0 9466.5 9145.0 7467.92 8666.300000000001 8684.0 9811.400000000001 11009.1 True False 7974.779166340929 8652.697775044151 8675.663853384647 9008.037411438012 8801.605697652087 9070.526152015089 7752.115782202627 8493.443847919172 8319.041679423468 9191.906529576001 9655.05049243484 0.8259697007891902 0.8961835861784382 0.8985622457575353 0.9329870846865284 0.9116063872010337 0.9394592145449936 0.8029078447882538 0.8796892211567574 0.8616259113240066 0.9520309123995019 1.0 13.237068088632924 -10.775258575305502 0.9825213159397983 1.0011894672998942 0.8845244234347226 0.41099634075512403 0.041585100309150184 0.35315830431893863 0.595439023162291 0.02916394042835381 0.007077909702805046 1.6778047697400704e-11 10.775258575305502 -0.11666504386517162 AIQGS(ph)LRPAK ddPTM_A549_MK2206_60min_R1 1 AIQGSLRPAK 10 1 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 AIQGS(1)LRPAK 53.967 0.0056115 4720200.0 1514.0 1637.5 1628.4 1521.8 1772.2 1589.3 1319.9 1567.2 2260.3 2142.0 2244.4 True False 1769.526186253837 1720.8417556719999 1859.3316060672882 1894.6410683161976 1511.5117276191443 1757.4786711080421 1559.7087449376659 1789.3553993487085 1748.3456589574034 1658.1207123163927 1687.0535377112185 1.0488856142968095 1.020027946479174 1.102117724485374 1.1230473876286153 0.8959476945051624 1.0417444567244545 0.9245164483953972 1.060639368787478 1.036330869101723 0.9828500846309369 1.0 10.720290042143464 -6.690717933154669 24.999999975155557 1.0086350194379445 1.0717411864885114 0.3205219688122164 0.053795615090355735 51.35676742745675 18153.50633906196 0.007276672320052313 0.015147599402430528 2.0383655314626114e-07 6.690717933154669 0.06310616705056682 AIQGS(ph)LRPAK ddPTM_A549_PD325901_60min_R1 2 AIQGSLRPAK 10 1 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 AIQGS(1)LRPAK;AIQGS(1)LRPAK 95.417 0.00015551 12336600.0 3506.1000000000004 3980.6 4183.1 3703.1000000000004 5194.5 4589.9 4854.2 5328.8 4674.7 4764.9 5006.3 True False 3862.0366909455965 4316.059131916914 4466.990321023761 3931.8320766497036 4829.656240052157 4552.521376176495 5038.929237320161 5222.512903637269 4478.238615707146 4464.043400817077 4390.556837550439 0.8796234358966385 0.983032287614095 1.0174086081336247 0.8955201406396859 1.100009957449201 1.0368892932306097 1.1476742982175945 1.18948759732968 1.01997053708696 1.0167374130402187 1.0 12.10018820752699 -4.480476497710273 0.7201472893312015 1.036403664354713 0.5344972612770451 0.3230654086171959 0.07371447988617506 8.096451338761488 1.3185211291322714 0.012759930789092872 4.306508214618382 3.30768011423904e-05 4.480476497710273 -0.5019064030776679 AIQLEPAEPGQAWGRQS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AIQLEPAEPGQAWGRQSPR 19 1 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 AIQLEPAEPGQAWGRQS(1)PR 44.632 0.012512 7070800.0 1710.1 2047.1 1630.3 1388.2 2220.7 2206.9 1755.8 2130.3 2208.8 2086.5 2473.4 True False 1883.7080930909185 2219.6163012980737 1740.9419617903084 1473.9459611690531 2064.7256929991013 2188.9277380953627 1822.6179298106256 2087.8094953119794 2115.9718173089072 1954.7580339156823 2169.187480174431 0.8683934008965623 1.0232477928185293 0.8025779134822932 0.6794921944923491 0.9518428959552497 1.0091003005048436 0.8402307068746604 0.962484577471419 0.9754674672650957 0.9011475733570499 1.0 11.082939033397999 -8.143922436838421 0.7199018995955793 0.9936683941625454 0.8677177040882319 0.10842302288272054 0.09480308156853735 0.6901071847493286 0.7265485416897359 0.021253479876816368 0.031231522336528716 7.1792249775064295e-09 8.143922436838421 -0.12595069007431348 AIRIS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AIRISPR 7 1 Q92628 Q92628 KIAA0232 Uncharacterized protein KIAA0232 1 AIRIS(1)PR 57.96 0.0094541 9740600.0 874.74 720.38 964.28 788.46 921.73 794.61 753.61 768.71 1261.9 1151.2 1449.5 True False 1022.3747266602916 757.0442650082414 1101.0294037696908 981.6327353953143 786.1447380083482 878.6951027805706 890.5311821141563 877.6769965756415 976.0816648402192 891.1431204568772 1089.5491458351503 0.9383465909439369 0.6948234211389881 1.0105367050017195 0.9009531503444785 0.7215321502599688 0.8064758768701911 0.8173391586035849 0.8055414479746972 0.895858317700798 0.8179008022385325 1.0 10.089515557622143 -9.640938191859409 0.8747832844837538 0.9843912362857635 0.8355888151389722 0.0 0.10010001589868073 0.4247342459167313 0.684706943998577 0.02823679582236797 0.01768067937087842 2.2859241095239243e-10 9.640938191859409 -0.14880242114679132 AIRIS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AIRISPR 7 1 Q92628 Q92628 KIAA0232 Uncharacterized protein KIAA0232 1 AIRIS(1)PR;AIRIS(1)PR 60.019 0.0081137 22658600.0 1732.9299999999998 2029.0 2085.7 2038.28 1992.01 2456.55 1732.03 2106.8999999999996 2327.17 1938.6100000000001 2704.2 True False 1908.8557778843597 2199.99095077612 2227.248144332971 2164.179926330254 1852.0980896614315 2436.544671266557 1797.9433494531838 2064.8762266689246 2229.3671378516715 1816.205833754747 2371.6005433361747 0.8048808148775074 0.9276397566014012 0.9391329204200045 0.912539817218064 0.7809485854881997 1.0273840921958233 0.7581139051874155 0.8706677996304659 0.9400264071096809 0.7658143943582743 1.0 11.211645317025427 -9.200790743458644 1.5283903607492846 0.9816989722953627 0.8813124176809206 0.0 0.0986903562750292 0.33168121753978996 1.6011467431178814 0.01518574682623381 0.013743815541940641 6.298095715313823e-10 9.200790743458644 -0.10038655461444213 AIRLELQGPRGS(ph)PNAR ddPTM_A549_PD325901_60min_R1 2 AIRLELQGPRGSPNAR 16 2 P19338;H7BY16 P19338 NCL Nucleolin 1 AIRLELQGPRGS(1)PNAR;AIRLELQGPRGS(1)PNAR 76.155 9.6976e-05 8753300.0 679.2 830.16 862.9000000000001 1135.2 922.78 1971.21 1081.6 1561.1100000000001 1263.24 1213.9099999999999 1336.65 True False 748.1518839993871 900.1204966467736 921.4615830392306 1205.318725773742 857.9671162181787 1955.1571193125926 1122.7608798742299 1529.972436382896 1210.150415835433 1137.2635154328232 1172.250523722468 0.6382184258904312 0.76785676647723 0.7860619930568595 1.0282091595457483 0.7318974049111227 1.6678662792182117 0.9577823657599365 1.3051582451202377 1.032330880938841 0.9701539836565447 1.0 10.19506520826903 -6.218582790404248 1.2932323614055234 1.068549592173401 0.6776597286147173 0.34430156137003864 0.22442033182862847 0.463007166657588 1.376729605000822 0.031748053964240575 0.1481451913317199 6.045290977984572e-07 6.218582790404248 -0.3908898635586836 AIS(ph)AANLHLR ddPTM_A549_MK2206_60min_R1 2 AISAANLHLR 10 0 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 1 AIS(1)AANLHLR;AIS(1)AANLHLR 87.001 0.00022559 5140800.0 288.27 147.14 296.87 365.36 433.65 366.86 283.39 418.2 486.84000000000003 207.52 505.54999999999995 True False 336.9229284751609 154.6287975142461 338.9706300007344 454.87321640163344 369.86065945268115 405.68088169804093 334.8782947404237 477.48113068378655 376.5715173237281 160.6410878711007 380.00798252981036 0.8866206605244942 0.40690934039027976 0.892009235553738 1.1970096348330002 0.9732970791571907 1.0675588417835844 0.881240158459444 1.2565028963472622 0.9909568604764435 0.4227308247623428 1.0 8.569885914213087 -5.986239103425283 20.125340518067127 1.021235660223398 0.647435800353909 0.20745815036179782 0.23059764657779722 11.811645794536934 17271.209144496617 0.01718537641407073 0.05332249501182514 1.0321929692831227e-06 5.986239103425283 -0.37379985986948905 AIS(ph)AANLHLR ddPTM_A549_PD325901_60min_R1 2 AISAANLHLR 10 0 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 1 AIS(1)AANLHLR;AIS(1)AANLHLR 96.745 0.0001629 10663000.0 743.44 576.03 554.8 559.2 636.47 558.37 742.94 870.22 743.0699999999999 535.26 748.28 True False 818.9134815083983 624.5740696774608 592.4520642834223 593.7405139646553 591.7665429022998 553.8228198469834 771.2129882523676 852.862779425617 711.841351995531 501.4635922519571 656.2463037377389 1.247875190830282 0.9517372762636762 0.9027891828251557 0.9047525457788128 0.9017445729321658 0.843925240710098 1.1751883155148006 1.29960774570161 1.0847167411704157 0.7641393016551924 1.0 9.35809358158294 -7.763026035047653 24.99999243606882 1.0738385693503147 0.9508861708548473 0.09968664517559833 0.15644575718415915 60.10502371239393 947049.7981991903 0.020723904639080037 0.029464947847643044 1.725734434712112e-08 7.763026035047653 -0.12295239849546746 AIS(ph)APT(ph)SPTR ddPTM_A549_MK2206_60min_R1 1 AISAPTSPTR 10 0 B0QY95;Q9NQG6-2;Q9NQG6 B0QY95 MIEF1 Mitochondrial dynamics protein MID51 2 AIS(0.977)APT(0.671)S(0.35)PT(0.001)R 58.37 0.017289 2464200.0 438.4 471.32 396.6 464.45 568.91 406.56 484.69 324.8 697.32 416.72 711.74 True False 512.391202149063 495.3081748295128 452.84384362950544 578.2402708499527 485.2240926305196 449.5819093473139 572.7518990710186 370.841394658283 539.3781333912211 322.5826625753905 534.9953149753085 0.9577489518253283 0.9258177800162094 0.846444503257763 1.0808324010774564 0.9069688631813795 0.840347376440228 1.0705736724020707 0.6931675554493376 1.0081922556950147 0.6029635279895462 1.0 9.063382447472652 AIS(ph)ETEENSDELSGER ddPTM_A549_MK2206_60min_R1 1 AISETEENSDELSGER 16 0 A7UKX8;F5GWH7;J3KN53;E7EPE2;Q00987-8;Q00987-9;Q00987;Q00987-11 A7UKX8 mdm2;MDM2 E3 ubiquitin-protein ligase Mdm2 1 AIS(0.999)ET(0.001)EENSDELSGER 129.93 4.832e-10 34266000.0 241.0 286.83 229.07 155.38 468.97 163.93 420.48 362.29 710.42 293.06 315.99 True False 281.674908115703 301.4284218500151 261.5555704997752 193.44810697527322 399.9851342408025 181.2769637920728 496.87577321872095 413.6457169665928 549.5110043076226 226.8575424609905 237.52096211966114 1.185894944185168 1.269060293289642 1.1011894199384624 0.814446460846751 1.6839993012460652 0.7632040649142661 2.091923882357798 1.7415124681004004 2.3135263490166538 0.955105353382248 1.0 7.891911032109087 -7.759799448001542 24.999269826140033 1.6792112568903605 1.1510036208185734 0.22581950013394336 0.43979404782471077 56.520833713222714 861598.4294904328 0.08052897865136038 0.1159923852910574 1.738603509711475e-08 7.759799448001542 -0.5282076360717871 AIS(ph)ETEENSDELSGER ddPTM_A549_PD325901_60min_R1 3 AISETEENSDELSGER 16 0 A7UKX8;F5GWH7;J3KN53;E7EPE2;Q00987-8;Q00987-9;Q00987;Q00987-11 A7UKX8 mdm2;MDM2 E3 ubiquitin-protein ligase Mdm2 1 AIS(0.999)ET(0.001)EENSDELSGER;AIS(0.982)ET(0.015)EENS(0.002)DELSGER;AIS(0.75)ET(0.248)EENS(0.001)DELSGER 141.85 3.1657e-14 89157000.0 739.61 578.92 842.57 721.13 872.4200000000001 914.73 529.13 831.38 621.6 687.03 1024.8 True False 814.6946627278955 627.7076201199167 899.7518669850092 765.6725622949424 811.1442288856111 907.2807421577654 549.2663317010459 814.7974736950069 595.4763136722277 643.6508085507268 898.7560967424428 0.9064691362659687 0.6984182053340767 1.0011079426845344 0.8519247491840511 0.902518749887336 1.0094849375111006 0.6111405905249171 0.9065835287774455 0.6625560770386337 0.7161573767161641 1.0 9.81178584193056 AIS(ph)PEGEDR ddPTM_A549_MK2206_60min_R1 2 AISPEGEDR 9 0 A7KAX9;A7KAX9-2 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 AIS(1)PEGEDR;AIS(1)PEGEDR 78.655 0.0018155 1968900.0 802.01 676.0 521.23 694.0 919.09 745.57 649.25 659.49 1041.0 1235.8 1036.6 True False 937.3696807380707 710.4055125705471 595.1482516767709 864.0300311548436 783.893078511161 824.4657225306884 767.2103209718769 752.9747271034204 805.2151621354054 956.6319216996249 779.1836112954236 1.2030151393708814 0.9117305629535378 0.7638100225020306 1.1088914328143524 1.0060441045569577 1.058114814761031 0.9846335444560484 0.9663636608726538 1.033408750469871 1.227736194437132 1.0 9.605819523058083 AIS(ph)PEGEDR ddPTM_A549_PD325901_60min_R1 2 AISPEGEDR 9 0 A7KAX9;A7KAX9-2 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 AIS(1)PEGEDR;AIS(1)PEGEDR 85.53299999999999 0.0012657 5761200.0 1532.51 1829.2800000000002 1427.03 1598.77 2079.5699999999997 1850.1499999999999 1714.75 1916.8 1722.42 1906.77 2189.26 True False 1688.0892870257667 1983.4398454587192 1523.8768372284997 1697.5223918298855 1933.5081773270308 1835.0829918152763 1780.0057495972032 1878.5679202994904 1650.032677276896 1786.3762167885957 1919.9948988625677 0.8792155062629671 1.0330443308124087 0.7936879614270153 0.8841285947350808 1.0070381845662553 0.9557749309138298 0.9270887910440304 0.9784233913394149 0.8593943026902826 0.9304067515215121 1.0 10.906886762590053 -8.893998832971613 0.0066510547559912574 1.8661152650190986 5.080074106792235e-07 0.04418684312732557 0.06766352900368187 5980.60717617868 29.50401879840672 4155.655461501527 4120.241847463876 1.2764422388395558e-09 8.893998832971613 -1.866114757011688 AIS(ph)PSIK ddPTM_A549_PD325901_60min_R1 2 AISPSIK 7 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 AIS(0.975)PS(0.025)IK;AIS(0.964)PS(0.036)IK 111.74 0.008025399999999999 14908700.0 5065.9 5104.700000000001 5393.3 4939.700000000001 6629.1 5425.1 5007.4 5348.6 5723.6 5898.7 6152.9 True False 5580.1864386815305 5534.890983946209 5759.321770547552 5244.814050127338 6163.494885153483 5380.919784286176 5197.959347154421 5241.917977104473 5483.056996355152 5526.255075321558 5396.132306446692 1.034108528438962 1.0257144691085027 1.0673055150384214 0.9719580159036175 1.142206034827951 0.9971808470777593 0.9632749999373595 0.9714213216829428 1.0161087024876339 1.024114080508999 1.0 12.397710006468367 AIS(ph)PTSATSSGR ddPTM_A549_MK2206_60min_R1 2 AISPTSATSSGR 12 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3 A0A087WY00 MYO5A Unconventional myosin-Va 1 AIS(0.994)PT(0.006)SATSSGR;AIS(0.993)PT(0.007)SATSSGR 184.98 3.0489000000000003e-19 36983000.0 5846.3 5970.7 5361.6 6789.9 7233.9 5488.5 6020.1 6605.2 7724.4 8336.1 9676.1 True False 6833.012511688114 6274.583127078355 6121.955501774981 8453.425804810196 6169.802892689381 6069.28942702856 7113.874244563409 7541.50732757663 5974.83573333211 6452.969220327112 7273.257323225592 0.9394707499029835 0.8626923052814061 0.8417075362129461 1.1622613402960444 0.8482860730071292 0.8344664786776596 0.9780864237879736 1.036881687589196 0.8214800422711225 0.8872186055786773 1.0 12.828385903499186 AIS(ph)PTSATSSGR ddPTM_A549_PD325901_60min_R1 2 AISPTSATSSGR 12 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3 A0A087WY00 MYO5A Unconventional myosin-Va 1 AIS(0.972)PT(0.027)SATSSGR;AIS(0.859)PT(0.109)S(0.032)ATSSGR 209.43 2.0341999999999997e-31 43328000.0 10620.3 10233.8 10332.5 10300.6 11452.4 9972.099999999999 10376.0 10526.400000000001 10468.8 11548.0 12198.6 True False 11698.465037748367 11096.23824152422 11033.725584369962 10936.844667640073 10648.022932635165 9890.890523839222 10770.864357965063 10316.44269419895 10028.832742232658 10818.857309205994 10698.249533296603 1.0934933795794117 1.0372012923225373 1.031358031987312 1.0223022592248274 0.9953051571189179 0.9245335410298101 1.0067875426201696 0.9643112793444067 0.93742744652006 1.0112735990625399 1.0 13.385087139145465 -5.9903313435909835 0.7887664345333036 0.969141969131631 1.0947516476643224 0.611994783493657 0.028254714648673608 0.5797854645418703 0.45516228367960476 0.004834186145307932 0.05112827704120843 1.0225125719007415e-06 5.9903313435909835 0.12560967853269145 AIS(ph)PTSSSR ddPTM_A549_MK2206_60min_R1 2 AISPTSSSR 9 0 B1AM27;O14795;O14795-2;A0A0U1RRL2 B1AM27 UNC13B Protein unc-13 homolog B 1 AIS(0.532)PT(0.435)S(0.028)S(0.004)S(0.001)R;AIS(0.772)PT(0.214)S(0.014)SSR 132.39 4.7893000000000004e-05 60926000.0 3784.0 4395.5 3812.1 4126.5 4708.4 3542.2 3329.5 3933.8 5613.1 6141.4 6242.0 True False 4422.64669008224 4619.212175301541 4352.7131021180985 5137.492685245622 4015.8005971797656 3917.033252877939 3934.4270522539305 4491.428196757242 4341.741812278814 4754.0534746124595 4691.939129563993 0.9426052998460834 0.9844995955288084 0.927700249709459 1.0949614953174025 0.8558935839291122 0.8348431522047338 0.8385503186652687 0.9572648051754704 0.9253619223065832 1.0132385232061265 1.0 12.195968581479956 -5.766610079869553 24.72765823775083 0.9460944818323664 0.9635524419122253 0.008066341864075621 0.07593349539185933 702.3501877190815 3358909.643917197 0.010776118069406315 0.035030351472796546 1.7115512977771467e-06 5.766610079869553 0.017457960079858892 AIS(ph)PTSSSR ddPTM_A549_PD325901_60min_R1 2 AISPTSSSR 9 0 B1AM27;O14795;O14795-2;A0A0U1RRL2 B1AM27 UNC13B Protein unc-13 homolog B 1 AIS(0.94)PT(0.058)S(0.003)SSR;AIS(0.933)PT(0.067)SSSR 142.98 3.657e-05 74099000.0 9738.8 9866.4 9585.1 9457.6 10927.5 10051.9 8816.900000000001 9737.099999999999 10156.5 10918.599999999999 11889.099999999999 True False 10727.475806674363 10697.876154133808 10235.602525888664 10041.774472231986 10159.99009782846 9970.040659096821 9152.431954292811 9542.885901892814 9729.657625180149 10229.197732620063 10426.816071214453 1.0288352391954 1.0259964385166127 0.9816613677636765 0.9630719870425777 0.9744096403385666 0.9561922442097486 0.8777782107004014 0.9152253033635144 0.9331379357540444 0.9810471061113316 1.0 13.348011063819074 -5.8857813131151095 1.5480440049691686 0.9561953029252914 1.0354922697453899 0.4566166648114899 0.03203933033718747 0.4292521970068681 1.7847883280365846 0.0057667025304924124 0.036043826164527164 1.3008244369947187e-06 5.8857813131151095 0.07929696682009846 AIS(ph)SANLLVR ddPTM_A549_MK2206_60min_R1 1 AISSANLLVR 10 0 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 AIS(0.965)S(0.035)ANLLVR 80.245 0.00030825 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AIS(ph)SDMFFGR ddPTM_A549_PD325901_60min_R1 1 AISSDMFFGR 10 0 A0A0D9SF70;G5E9L0;Q8N6H7-2;Q8N6H7;H0YDN9;Q8N6H7-3;E9PMU9 A0A0D9SF70 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 AIS(0.979)S(0.021)DMFFGR 91.54899999999999 0.00063866 2146400.0 651.32 735.0 757.71 630.42 877.94 630.8 852.58 802.25 633.17 829.98 909.0 True False 717.4415269235577 796.9410294827245 809.1327570803746 669.3596116122995 816.2765231285773 625.6629739410731 885.0253984496774 786.2484943970496 606.5600668079865 777.5749211547267 797.1987626257616 0.8999531366061023 0.9996767015264949 1.0149699109106813 0.8396395516315233 1.0239309961294705 0.7848268252202312 1.1101690568794138 0.9862640677054683 0.7608642853510438 0.9753840041015629 1.0 9.638795660670382 AIS(ph)TGSLASSTLNK ddPTM_A549_PD325901_60min_R1 1 AISTGSLASSTLNK 14 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 AIS(0.86)T(0.14)GSLASSTLNK 172.57 1.2131e-22 3035200.0 2818.1 3227.8 3109.2 2814.7 3427.8 3377.7 3438.1 3669.2 3492.0 3284.2 2875.3 True False 3104.1914374244284 3499.8180339650844 3320.209009138456 2988.5576263524954 3187.0431532680327 3350.1931310728646 3568.9387769005084 3596.0149275682834 3345.243383757112 3076.8350515149214 2521.65632802844 1.2310128874109678 1.3879044479869393 1.3166778407644335 1.1851565945503377 1.2638689570199386 1.3285684864488323 1.4153152978189092 1.4260527446179916 1.326605591164199 1.2201643091945635 1.0 11.300155951432775 -10.541009410402316 0.8548959214382297 1.0006397341439193 1.3212232232497843 0.35255255655814444 0.09419815446024404 0.2609079492402696 0.3430672034639522 0.051425321498294596 0.014620471207126519 2.8773360672169362e-11 10.541009410402316 0.320583489105865 AIS(ph)TPEK ddPTM_A549_PD325901_60min_R1 2 AISTPEK 7 0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 1 AIS(0.5)T(0.5)PEK;AIS(0.5)T(0.5)PEK 99.13600000000001 0.011426 67737000.0 19732.0 18849.7 19123.1 18712.7 20897.9 19651.1 17891.0 19388.5 19223.3 19506.6 19412.0 True False 21735.178114069335 20438.2303720279 20420.908562542 19868.540979374822 19430.10359784118 19491.06795690144 18571.85179533085 19001.781157515998 18415.41155182647 18274.949946982808 17024.44706280668 1.2767039090246983 1.200522419120402 1.1995049523314958 1.167059400289225 1.141306001079479 1.1448869901615535 1.0908930978383895 1.116146743997883 1.0817039451494803 1.073453362659167 1.0 14.055320321240472 -2.000000000000011 0.10167573218808736 0.9190547607240316 1.9091190133982427 0.873316935890172 0.025587300598074948 12.2060274843181 0.08496289254375464 0.08952991524112751 1.6946629820002996 0.009999999999999745 2.000000000000011 0.9900642526742112 AIS(ph)TPETPLTK ddPTM_A549_PD325901_60min_R1 2 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 AIS(0.5)T(0.5)PETPLTK;AIS(0.5)T(0.5)PETPLTK 178.95 8.4724e-16 36263000.0 11357.2 11447.7 10786.3 11167.5 13556.8 11383.400000000001 11980.4 11733.5 10916.7 12069.3 13168.7 True False 12510.17458327126 12412.437854706652 11518.323181291049 11857.291111767321 12604.61713642104 11290.697364554238 12436.320677926433 11499.466137747322 10457.909062846868 11307.242338240372 11549.03338326718 1.0832226531959488 1.0747598905281905 0.9973408855133603 1.0266912146038785 1.0914001819999277 0.9776313731080531 1.0768278404965734 0.9957081044036401 0.9055224550652707 0.9790639582549716 1.0 13.495484487335872 -8.512764393216798 8.14198970651265 0.9551033158440032 1.0437853856475119 0.46914469311781226 0.040168938951234454 0.10321598934036169 51.674017110382685 0.007607224680761871 0.008917592812219308 3.070687398848023e-09 8.512764393216798 0.08868206980350868 AISAPTS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 AISAPTSPTR 10 0 B0QY95;Q9NQG6-2;Q9NQG6 B0QY95 MIEF1 Mitochondrial dynamics protein MID51 1 AISAPT(0.004)S(0.995)PT(0.001)R;AISAPT(0.008)S(0.973)PT(0.019)R 132.85 9.4634e-07 74268000.0 6421.799999999999 7605.6 7203.4 6363.1 8607.1 6701.799999999999 5201.7 5953.0 8734.3 9555.4 9073.5 True False 7505.642842063994 7992.692553855851 8224.950436714018 7922.05978565041 7341.006991756423 7410.9800277052045 6146.781558104601 6796.855980297901 6755.994995811026 7396.828503486482 6820.299534139522 1.1004858077704556 1.1718975851203937 1.2059514975175814 1.1615413290862 1.0763467139544916 1.0866062393020992 0.9012480357111039 0.9965626797292007 0.990571596158407 1.084531326881041 1.0 12.735619385631217 -7.207997056604525 1.7159843616729176 0.9901164200687067 1.1626276864690452 0.6561773308872156 0.05117255845790973 0.12030188882023878 0.6909737715992137 0.006338983345579807 0.012292426755097292 6.194452733024365e-08 7.207997056604525 0.17251126640033854 AISS(ph)ANLLVR ddPTM_A549_MK2206_60min_R1 2 AISSANLLVR 10 0 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 AIS(0.265)S(0.735)ANLLVR;AIS(0.25)S(0.75)ANLLVR 137.01 4.6482e-07 14265200.0 3084.6 3551.8 3277.2 3022.2 4336.4 4912.9 3126.6 4585.7 5147.4 5656.700000000001 5162.7 True False 3605.2050687705287 3732.5714490356063 3741.9562388870795 3762.6391356717136 3698.521304394346 5432.779817080918 3694.6627486340676 5235.737018117263 3981.522118708727 4378.84754125123 3880.6591067286154 0.9290187490366054 0.9618395603375102 0.9642579097965495 0.9695876479198421 0.9530652403818559 1.3999631680250153 0.9520709361530747 1.3491875668849909 1.0259912064435721 1.1283772732469113 1.0 11.922085991005606 AISS(ph)ANLLVR ddPTM_A549_PD325901_60min_R1 2 AISSANLLVR 10 0 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 AIS(0.246)S(0.754)ANLLVR;AIS(0.218)S(0.782)ANLLVR 177.04 6.9972e-11 35393000.0 5629.7 6701.5 6120.5 5678.3 8765.1 6345.1 6969.5 7475.5 8292.400000000001 10256.4 9528.7 True False 6201.222999633905 7266.2589239162935 6535.873935556386 6029.035694645033 8149.469613953452 6293.427609311201 7234.728136356734 7326.395288083698 7943.899265597786 9608.809153631828 8356.730307406044 0.7420633156173715 0.8695098030717427 0.7821089942036363 0.7214586893275565 0.9751983508108536 0.7530968905067731 0.8657367020621749 0.8767059625689697 0.9505989751227952 1.1498287966905125 1.0 13.028722861896375 -8.553125714170816 0.6310214889461555 0.9936092377666182 0.7993413026301123 0.5717922180796726 0.08168963541138805 0.32493299433850525 0.2760026331413499 0.017531022939723993 0.02004933292512695 2.7981712225514147e-09 8.553125714170816 -0.19426793513650598 AISS(ph)PTVSR ddPTM_A549_MK2206_60min_R1 2 AISSPTVSR 9 0 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 AIS(0.037)S(0.941)PT(0.022)VSR;AIS(0.207)S(0.717)PT(0.075)VS(0.001)R 116.12 0.00019601 149418000.0 6866.3 7871.4 6726.1 6753.3 9243.8 7727.0 8316.400000000001 7906.0 11217.7 12518.5 12163.7 True False 8025.163575082372 8272.02063853226 7679.962119607713 8407.85880316716 7884.049265187817 8544.666011232519 9827.382230774767 9026.69971110956 8676.908860985915 9690.562155524158 9143.117588958272 0.8777272628292562 0.9047264850363517 0.8399719291461869 0.9195833610759803 0.8622933248402083 0.9345462232216639 1.074839313304124 0.9872671573217757 0.9490098728976891 1.0598750438501425 1.0 13.158470459051793 -7.522405564927603 24.999999155102838 0.9840249975755598 0.8837014141670192 0.6708700874457356 0.04224180724405201 8.554864759871236 451997.055176378 0.005723078638262819 0.008542258649874677 3.003270395366045e-08 7.522405564927603 -0.10032358340854064 AISS(ph)PTVSR ddPTM_A549_PD325901_60min_R1 2 AISSPTVSR 9 0 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 AIS(0.021)S(0.904)PT(0.074)VSR;AIS(0.092)S(0.899)PT(0.009)VSR 125.71 7.0593e-05 189772000.0 16842.9 16698.2 17780.9 16795.7 20820.5 17277.699999999997 19333.9 17154.800000000003 18619.9 17955.1 20777.9 True False 18552.778808912368 18105.415916338 18987.618799237745 17833.132243197706 19358.13990682568 17136.99613960317 20069.662144416023 16812.63405631974 17837.370355446452 16821.411921763454 18222.35002196019 1.0181331599137309 0.9935829294530469 1.0419961627537235 0.9786406375525974 1.062329495564333 0.9404383144298604 1.1013761737772347 0.9226380810410532 0.9788732152521608 0.9231197897906456 1.0 14.153421406000144 -8.293173568878704 24.997045418038198 0.9846908125187133 1.016403058984622 0.21194821996569357 0.048255781179094105 1074.5400038987736 846411.8970893038 0.006549173714160434 0.00791766765453662 5.091273540230784e-09 8.293173568878704 0.031712246465908756 AIST(ph)PET(ph)PLTK ddPTM_A549_PD325901_60min_R1 1 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 2 AIS(0.354)T(0.649)PET(0.98)PLT(0.017)K 75.73899999999999 0.0048798999999999995 9250400.0 4795.5 4062.5 4162.5 4490.1 5230.2 4122.0 4438.5 5319.1 5105.5 5259.6 5099.4 True False 5282.335629739488 4404.8611323449895 4444.992281145896 4767.443279243023 4862.848795210474 4088.4317986447427 4607.409546340394 5213.006377746771 4890.933589854501 4927.507958391047 4472.206127759963 1.181147621293856 0.9849414375162745 0.9939148943862081 1.066015998155912 1.08734898533091 0.9141867977119728 1.0302319291012088 1.165645372512796 1.0936288377888945 1.1018069868928728 1.0 12.126770969409323 -12.953202783270694 15.298743701933091 0.3086548207628381 1.0470279943520582 0.0 0.07747910303646148 0.0 0.0 0.0 0.009790568938551594 1.1137743622464249e-13 12.953202783270694 0.73837317358922 AIST(ph)PET(ph)PLTKR ddPTM_A549_PD325901_60min_R1 2 AISTPETPLTKR 12 1 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 2 AIS(0.141)T(0.859)PET(0.95)PLT(0.05)KR;AIS(0.068)T(0.932)PET(1)PLTKR 90.367 0.00011981 29356000.0 5738.6 5939.1 5610.799999999999 6823.5 7115.3 7369.9 6261.700000000001 7713.4 8069.4 7538.2 7101.3 True False 6321.178447465964 6439.608800273262 5991.582628481299 7244.972097707128 6615.545874452428 7309.881977882556 6499.992420033715 7559.550185954758 7730.271180094392 7062.236765522742 6227.885118849638 1.0149799373039108 1.0339960801111778 0.962057345975581 1.163311775899514 1.0622459708560577 1.1737342353599443 1.043691766304504 1.213822997966779 1.241235352382714 1.1339703014347218 1.0 12.604526617005412 -6.262310665005556 24.998791018701375 1.1215384209073715 1.0067096156070827 0.3822205832372644 0.07046716244013893 88.16166413613269 2529566.7785961125 0.013274167582541543 0.03261819801869462 5.466248044580081e-07 6.262310665005556 -0.11482880530028883 AIST(ph)PETPLTK ddPTM_A549_MK2206_60min_R1 2 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 AIS(0.017)T(0.982)PET(0.001)PLTK;AIS(0.002)T(0.997)PETPLTK 181.49 1.7340000000000002e-18 19853700.0 6414.5 7833.799999999999 6428.4 6047.8 8200.5 7309.0 7345.1 6523.299999999999 9358.8 10480.5 9971.7 True False 7497.110780531856 8232.506959134846 7340.043783126354 7529.511271496062 6994.217313136661 8082.433528678465 8679.609593485606 7447.997751768393 7239.046742932597 8112.94777097663 7495.451685080621 1.0002213469609227 1.098333670207134 0.9792663726638916 1.004544033881672 0.9331281965379556 1.0783117373388194 1.1579835289662397 0.9936689694889658 0.9657919291697408 1.0823827718248265 1.0 12.871799704021484 -8.497858304533763 24.867959307318394 0.9836295582710944 1.0357358235107135 0.0 0.0653420369197342 1049.7285783293883 1043332.892817943 0.009803302436479052 0.01182538666664623 3.177910745333508e-09 8.497858304533763 0.05210626523961903 AISTPET(ph)PLTK ddPTM_A549_MK2206_60min_R1 2 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 AISTPET(0.997)PLT(0.003)K;AIST(0.02)PET(0.972)PLT(0.008)K 171.26 4.4679e-15 31219000.0 9343.2 11155.7 9318.5 8703.8 12256.1 9896.8 9802.599999999999 9961.900000000001 15015.6 12940.8 14403.7 True False 10920.10374069144 11723.477480152751 10640.003421234362 10836.231390728426 10453.243925557492 10944.072807035853 11583.60553309036 11374.029832039243 11614.59057498597 10017.464292224076 10826.863768103314 1.0086119096522501 1.08281379827563 0.9827410457108128 1.000865220328412 0.9654914063252064 1.0108257609445355 1.0698948265347588 1.0505378173823445 1.072756693328252 0.9252415571844744 1.0 13.402327775638037 -7.56477739831024 24.722321547534154 1.0391777738502348 1.008215351182786 0.0 0.047491508211637445 207.98539183976277 122721.25561710594 0.0059705603231501305 0.008855775797922537 2.7240972117541895e-08 7.56477739831024 -0.030962422667448752 AISTPET(ph)PLTK ddPTM_A549_PD325901_60min_R1 1 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 AIS(0.002)T(0.04)PET(0.952)PLT(0.005)K 101.39 0.00026473 31545000.0 4682.1 5758.2 4668.9 5851.7 5767.5 4269.9 5491.3 5501.5 6609.6 4808.2 7055.3 True False 5157.4233452201515 6243.46372240466 4985.759630376472 6213.14621882506 5362.410696794844 4235.127350080834 5700.274426454656 5391.76826665674 6331.821497503148 4504.609431427452 6187.542827231606 0.833517195634128 1.009037657877202 0.8057737569805511 1.0041378932329603 0.8666462352704332 0.6844602887339836 0.921250096462773 0.8713908601856245 1.0233176034978806 0.7280126468947413 1.0 12.59515089042587 -8.759454654879546 24.982658134620575 1.0110110959508203 0.8759982521164256 0.0 0.1206269235029935 41.54849362600945 522989.03218211373 0.014031869366614193 0.015527080417801105 1.7399843620587004e-09 8.759454654879546 -0.1350128438343947 AIT(ph)GASLADIMAK ddPTM_A549_MK2206_60min_R1 2 AITGASLADIMAK 13 0 C9JXB8;C9JNW5;P83731 C9JXB8 RPL24 60S ribosomal protein L24 1 AIT(0.998)GAS(0.002)LADIMAK;AIT(0.975)GAS(0.025)LADIMAK 80.318 0.00032779 6154500.0 4929.5 5113.9 5871.3 5688.9 7598.2 5744.700000000001 4837.9 5674.8 8061.4 7460.8 8868.1 True False 5761.479085296093 5374.175666767043 6703.938626076441 7082.680755384423 6480.514845274679 6352.600340976764 5716.883807208071 6479.220278346131 6235.505771410525 5775.400098249362 6665.906022891132 0.8643204787932531 0.8062183367589931 1.005705541460486 1.0625233435728108 0.9721881501209575 0.952998785035604 0.8576304237677428 0.9719939429233009 0.9354325953587426 0.8664088690143968 1.0 12.70258526288663 -4.626393034718079 0.010064938358005992 1.821339563216609 1.019515772199112e-05 0.0 0.07660794635335845 10355.92225969967 12.91920542544232 1065.1222526520642 1281.2301240342545 2.3637795184729804e-05 4.626393034718079 -1.821329368058887 AIT(ph)PKR ddPTM_A549_PD325901_60min_R1 1 AITPKR 6 1 Q9NQW6;Q9NQW6-2;H7C1K5;H7C3S1;H7C1C2 Q9NQW6 ANLN Actin-binding protein anillin 1 AIT(1)PKR 63.48 0.036968 8410500.0 2586.4 2403.3 2378.3 3083.4 3237.6 2826.8 3053.0 3499.1 3893.0 2614.8 2654.3 True False 2848.9694239929545 2605.8345253820826 2539.7057398797106 3273.854615090517 3010.2021451136516 2803.779478022555 3169.1835856657017 3429.307705509153 3729.390748272172 2449.701081755439 2327.8379269940147 1.2238693213800704 1.1194226604714919 1.0910148470513517 1.406392849401725 1.2931321851091189 1.2044564810588567 1.361427936590987 1.4731728810422335 1.6020835063410155 1.0523503605419768 1.0 11.184774900441962 -6.251781687786326 24.494023514959622 1.3104542789769922 1.142234310358423 0.1420462095201558 0.1672425163039774 983.1420431101031 2493453.4035566207 0.031058478850649773 0.08097263025431607 5.600390525513042e-07 6.251781687786326 -0.16821996861856925 AIT(ph)PPQQPYK ddPTM_A549_MK2206_60min_R1 3 AITPPQQPYK 10 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYK;AIT(1)PPQQPYK;AIT(1)PPQQPYK 146.16 4.0887e-08 64473200.0 22063.4 24131.7 23870.800000000003 21643.5 30757.8 22623.699999999997 23151.6 21119.2 33072.9 34918.8 35780.7 True False 25787.162521659753 25359.90045517555 27256.038382529518 26946.158471613624 26233.36836461128 25017.724917603366 27357.94604083558 24112.91127483747 25581.94095656873 27030.61882784015 26895.364692917374 0.9587957931074474 0.9429097074803312 1.0134102546565253 1.0018885699924949 0.9753862297141327 0.9301872349844557 1.017199296354588 0.8965452430242511 0.9511654238064852 1.0050289013169023 1.0 14.715069931112929 -7.003355213318362 24.961010336212645 0.9694418194679993 0.9802879823379786 0.02211156952248161 0.03704125369578819 635.8834945904732 4730662.783855775 0.005454288689480356 0.01016151769065152 9.923041020687816e-08 7.003355213318362 0.010846162869979303 AIT(ph)PPQQPYK ddPTM_A549_PD325901_60min_R1 2 AITPPQQPYK 10 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYK;AIT(1)PPQQPYK 150.04 3.0084e-08 126664000.0 26485.0 25728.0 26654.0 27200.0 30319.0 29195.0 26289.0 27205.0 30304.0 30936.0 34586.0 True False 29173.73770277349 27896.188852423842 28462.900723522576 28880.082224318 28189.498034871773 28957.245599571383 27289.442280892792 26662.374933090367 29030.4282649987 28982.695680429224 30332.14125871791 0.9618093709222894 0.919690720628108 0.9383742638130407 0.9521280406149181 0.9293606341349109 0.9546719881257522 0.89968730028413 0.8790139379107369 0.9570846982870002 0.9555110347542366 1.0 14.88855972631775 -9.561724150215335 1.2846851131934078 0.9901626507408176 0.9307109064215654 0.28903724241775797 0.02646720018870967 0.2308683995282223 0.7813637128139503 0.0065460324272824544 0.004925285953471523 2.743316084165123e-10 9.561724150215335 -0.05945174431925215 AIT(ph)PPQQPYKK ddPTM_A549_MK2206_60min_R1 2 AITPPQQPYKK 11 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYKK;AIT(1)PPQQPYKK 136.99 2.0411e-08 40959000.0 7779.8 10211.4 9448.099999999999 8647.599999999999 11632.8 8814.8 7796.4 7730.9 12551.0 12071.5 11879.0 True False 9092.840042151644 10731.116643584157 10787.982650014954 10766.262388205509 9921.630529876977 9747.576285209323 9212.904961763787 8826.778749888295 9708.21853982851 9344.53976597914 8929.116456278545 1.0183359223361876 1.2018117017656913 1.2081803057265916 1.2057477848925542 1.1111547910096458 1.0916619055130896 1.0317823725197015 0.9885388765068361 1.0872541070961321 1.0465245706822972 1.0 13.124301711161014 -7.314906998371653 1.9487553277506955 1.0372178680638868 1.1633592994757165 0.5040778759845872 0.05582822666962211 0.21704496329190226 1.6078851338201052 0.009104640680134585 0.016448729376217257 4.842760613728445e-08 7.314906998371653 0.12614143141182965 AIT(ph)PPQQPYKK ddPTM_A549_PD325901_60min_R1 3 AITPPQQPYKK 11 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYKK;AIT(1)PPQQPYKK;AIT(1)PPQQPYKK 128.54 6.8651e-08 58980100.0 13559.2 14666.3 14760.5 14080.4 15533.6 16888.0 15419.800000000001 16137.2 16152.7 17138.8 16413.9 True False 14935.720002244534 15902.280572384328 15762.236292097055 14950.11432909144 14442.57352401082 16750.46972719856 16006.608927038318 15815.330886611504 15473.858191527343 16056.653243074084 14395.09435628491 1.0375562419098412 1.1047013780386497 1.094972766553298 1.038556188592415 1.0032982880522199 1.1636234756519879 1.1119488716688974 1.098661147692062 1.0749396849053263 1.1154253557263927 1.0 13.813289624991135 -10.343596419304403 0.8285998959455211 1.002209724211263 1.0819798499899214 0.0 0.05298115387587509 0.5293099981368654 0.6860695867914218 0.023954200224194026 0.008198513321344148 4.533186436780818e-11 10.343596419304403 0.07977012577865827 AIT(ph)SAYYR ddPTM_A549_PD325901_60min_R1 1 AITSAYYR 8 0 H3BSC1;P62491;H3BMH2;P62491-2;Q15907-2;Q15907;P57735 H3BSC1 RAB11A;RAB11B;RAB25 Ras-related protein Rab-11A;Ras-related protein Rab-11B;Ras-related protein Rab-25 1 AIT(0.641)S(0.359)AYYR 109.11 0.0017994 15977000.0 1908.3 2417.1 1866.1 2087.3 2044.0 2588.8 1972.8 2312.0 2605.2 2032.6 2393.3 True False 2102.029211183789 2620.7974998131876 1992.7447677708976 2216.2277803977563 1900.4364914171938 2567.717671113905 2047.875983557581 2265.8853462710863 2495.712503827041 1904.2612891143149 2098.9392723786964 1.0014721430227902 1.248629502674023 0.9494056326425061 1.055879895889574 0.9054270966417516 1.223340620142835 0.975671859832683 1.0795383058906667 1.1890351172469547 0.9072493493135912 1.0 11.035444711079911 -7.262577036696841 24.999989488474565 1.089447801821858 1.0409087751224322 0.0 0.11822192905323312 316.9937425880498 6965938.20043832 0.016431440974733962 0.027157142087183398 5.462896384915921e-08 7.262577036696841 -0.04853902669942589 AIT(ph)SPLAAGSKPSKK ddPTM_A549_PD325901_60min_R1 1 AITSPLAAGSKPSKK 15 2 Q9UGU5;B0QXZ8;B0QXZ9 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AIT(0.625)S(0.375)PLAAGSKPSKK 81.723 0.00011148 18010000.0 4819.7 4664.3 4523.0 5313.5 5659.9 5500.4 5378.1 5834.1 5574.8 5995.1 5329.3 True False 5308.9923959243915 5057.376930362273 4829.957979008501 5641.702827165941 5262.368149594997 5455.60656605181 5582.766538509242 5717.734298737087 5340.510542889214 5616.568362869834 4673.829885216139 1.1358976527402815 1.0820626883231967 1.0334047446369867 1.2070834766603926 1.1259220551095521 1.1672668240041257 1.1944736277561523 1.2233509646602538 1.1426411902114502 1.2017057746658015 1.0 12.190389509535631 -10.458317747257224 0.9116113011301743 1.0044715182404624 1.1447202134980974 0.0 0.07817447421753428 0.37079802290887076 0.5781970439221696 0.031596222637680464 0.01045587784363973 3.480825506980302e-11 10.458317747257224 0.14024869525763495 AITGAS(ph)LADIMAK ddPTM_A549_PD325901_60min_R1 2 AITGASLADIMAK 13 0 C9JXB8;C9JNW5;P83731 C9JXB8 RPL24 60S ribosomal protein L24 1 AIT(0.002)GAS(0.998)LADIMAK;AIT(0.006)GAS(0.994)LADIMAK 87.719 6.8568e-05 5210800.0 5858.1 6543.5 6416.2 7519.099999999999 8155.3 7824.6 7118.1 8372.4 7558.200000000001 7952.4 8060.9 True False 6452.80999949471 7094.943709415251 6851.641915744937 7983.537729884902 7582.49986225765 7760.879051837866 7388.983190673781 8205.40591397926 7240.55513834851 7450.284106834921 7069.460402255224 0.9127726350141523 1.0036047032885138 0.9691888101614091 1.129299447994373 1.07257123327811 1.0978035960654187 1.0451976205024964 1.1606834817777125 1.0242019512604816 1.053868850366318 1.0 12.787384385877889 -5.366362597956017 1.489863094827925 1.040336959536249 0.8857942673759529 0.3600672533919288 0.05471392785035448 0.9775063862745372 2.278131503991693 0.008734069683635394 0.20871704530242524 4.301673083929977e-06 5.366362597956017 -0.15454269216029615 AITS(ph)AYYR ddPTM_A549_MK2206_60min_R1 2 AITSAYYR 8 0 H3BSC1;P62491;H3BMH2;P62491-2;Q15907-2;Q15907;P57735 H3BSC1 RAB11A;RAB11B;RAB25 Ras-related protein Rab-11A;Ras-related protein Rab-11B;Ras-related protein Rab-25 1 AIT(0.029)S(0.971)AYYR;AIT(0.27)S(0.73)AYYR 116.73 0.0012787 19662400.0 3301.8 3841.5 3492.2 3531.5 4409.8 3589.3 3977.2 3943.0 4836.7 5109.8 5331.7 True False 3859.0631187403687 4037.0159416268602 3987.4464718178483 4396.71765853506 3761.1242616267373 3969.117343615489 4699.805758289332 4501.932324931061 3741.1951726227812 3955.4926310897754 4007.691742565895 0.9629141577315106 1.0073169796842185 0.9949483962219398 1.0970698199757485 0.9384764356199475 0.9903749086935242 1.1726964198300132 1.1233230033926542 0.9335037255703476 0.9869752678526369 1.0 11.96855583047708 -8.79871101972479 24.99994065711254 0.9685989854105665 1.035408289782248 0.13927875171939486 0.06878155093148727 234.65178694647446 157391.45836871606 0.012645066685693351 0.013461856861369791 1.589604122013321e-09 8.79871101972479 0.06680930437168153 AITS(ph)AYYR ddPTM_A549_PD325901_60min_R1 1 AITSAYYR 8 0 H3BSC1;P62491;H3BMH2;P62491-2;Q15907-2;Q15907;P57735 H3BSC1 RAB11A;RAB11B;RAB25 Ras-related protein Rab-11A;Ras-related protein Rab-11B;Ras-related protein Rab-25 1 AIT(0.012)S(0.988)AYYR 149.82 0.0006646 20514000.0 4970.9 4585.6 4129.2 3993.3 5054.9 4706.4 4905.9 5003.6 5316.1 5285.2 6066.0 True False 5475.542108616833 4972.044605164599 4409.432342896729 4239.957071557687 4699.861262458307 4668.072638801946 5092.596709111491 4903.799272751737 5092.682804235729 4951.491570022124 5319.920455542208 1.0292526278118501 0.9346088248339882 0.8288530589405811 0.7969963286087421 0.8834457773822663 0.8774703828398077 0.9572693335679681 0.9217805630238394 0.9572855171039735 0.9307454145980206 1.0 12.377188959100446 -8.68174360699504 0.7932913598687538 0.9884845301512729 0.8887172705121602 0.15664720678828337 0.060682387330742354 0.5004601620870511 0.6434523494606449 0.015140496457321366 0.016247645508489617 2.0809248332897313e-09 8.68174360699504 -0.0997672596391127 AITS(ph)PLAAGSKPSK ddPTM_A549_MK2206_60min_R1 2 AITSPLAAGSKPSK 14 1 Q9UGU5;B0QXZ8;B0QXZ9 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AIT(0.134)S(0.866)PLAAGSKPSK;AIT(0.109)S(0.89)PLAAGS(0.001)KPSK 99.569 9.6049e-06 14017600.0 7991.799999999999 8290.6 9106.6 8089.7 10815.3 9204.099999999999 8795.8 8710.099999999999 12093.6 11607.3 11406.8 True False 9340.620459249272 8712.556127984295 10398.05281491794 10071.676863160434 9224.383696941277 10178.071752812893 10393.883005320647 9944.783348562527 9354.418909510805 8985.202868380038 8574.176748335554 1.0893897727338666 1.0161390864348117 1.2127173395319197 1.1746523495816177 1.075833163659933 1.1870611082036175 1.212231017670395 1.1598528512364803 1.090999075955218 1.0479376775297142 1.0 13.065782441882163 -9.661670839119282 0.9418833526058188 1.0148841133604354 1.140181851096635 0.3453966514121579 0.05976765681039775 0.345119264980744 0.6395909270645664 0.019699793580506636 0.012613313992905316 2.1793609298290066e-10 9.661670839119282 0.12529773773619968 AITS(ph)PLAAGSKPSK ddPTM_A549_PD325901_60min_R1 2 AITSPLAAGSKPSK 14 1 Q9UGU5;B0QXZ8;B0QXZ9 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AIT(0.103)S(0.897)PLAAGSKPSK;AIT(0.1)S(0.9)PLAAGSKPSK 125.45 1.6085999999999997e-07 33666000.0 13584.4 13329.3 14465.0 13919.3 18358.6 14103.7 14520.400000000001 15069.7 15980.0 15533.9 15345.599999999999 True False 14963.478287693268 14452.606890182415 15446.68188511121 14779.063547976091 17069.155269731742 13988.84414326683 15072.981767867772 14769.123011549047 15308.416171946907 14553.086902968036 13458.18848377324 1.1118493626192694 1.073889469419169 1.1477534219211991 1.0981465719398604 1.2683100173780673 1.03942994706408 1.1199859316906964 1.0974079482804409 1.1374796979849493 1.0813555569172577 1.0 13.716196611090588 -10.82745842426478 0.709841991625804 0.9850630474662198 1.1234941375146204 0.16636139063505528 0.059517580811544665 0.7236025595621045 0.5297357038371324 0.06170298297522937 0.010080112593417826 1.4877897958612677e-11 10.82745842426478 0.1384310900484006 AITS(ph)PLAAGSKPSKK ddPTM_A549_MK2206_60min_R1 2 AITSPLAAGSKPSKK 15 2 Q9UGU5;B0QXZ8;B0QXZ9 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AIT(0.143)S(0.856)PLAAGSKPSKK;AIT(0.181)S(0.815)PLAAGS(0.004)KPS(0.001)KK 70.235 0.00039988 23935000.0 5854.4 6828.0 6667.0 6104.4 7973.5 6701.200000000001 6102.1 5858.3 9853.400000000001 8925.6 9530.8 True False 6842.479593662121 7175.51603525399 7612.480850927667 7599.978274036933 6800.608712431582 7410.316536103448 7210.772583138217 6688.731965291315 7621.620632646497 6909.300760901577 7164.039323301587 0.9551147453094558 1.001601988966626 1.0625961845529643 1.0608509991447732 0.9492701541031582 1.0343768650181506 1.0065233114626586 0.9336537201206729 1.0638719706432365 0.9644420485561193 1.0 12.80655754093857 AITS(ph)PLAAGSKPSKK ddPTM_A549_PD325901_60min_R1 1 AITSPLAAGSKPSKK 15 2 Q9UGU5;B0QXZ8;B0QXZ9 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AIT(0.484)S(0.516)PLAAGSKPSKK 69.422 0.00046208 22649000.0 4693.0 4830.0 5297.0 4957.7 6027.0 6290.3 6281.6 7097.8 6479.7 5859.3 6760.4 True False 5169.429905195998 5237.041050886474 5656.486273448607 5263.9258692463745 5603.6843120212425 6239.07388234232 6520.649725423416 6956.228810883613 6207.380742763732 5489.3427980456045 5928.913657706486 0.8719017013305126 0.8833053326859118 0.9540510454383537 0.88783985956757 0.9451452045919903 1.0523131626706492 1.0998051416970431 1.173272071830867 1.0469676404707446 0.9258597974201359 1.0 12.53355207169075 -7.123912240070609 3.467874379963563 1.0436308030817365 0.9029123814183285 0.5804829274297696 0.060456746267167086 0.14162437617340168 3.142369840035909 0.008656765575631081 0.015654507607466662 7.517747933399069e-08 7.123912240070609 -0.14071842166340798 AITSLLGGGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 AITSLLGGGSPK 12 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AITSLLGGGS(1)PK;AITSLLGGGS(1)PK 173.06 8.771699999999999e-16 129118000.0 12194.5 13735.9 13436.400000000001 11425.3 17923.0 13906.2 14444.7 14369.599999999999 20419.7 18202.8 19145.4 True False 14252.633473099344 14434.998639227499 15341.883561632609 14224.49901290121 15286.550442454532 15377.744853811531 17069.11501477469 16406.534805054365 15794.670553560363 14090.77483760636 14391.068793840826 0.9903804698091131 1.0030525769847944 1.0660697812937088 0.988425475319046 1.0622248188402073 1.0685616943470515 1.18609084976927 1.1400497794907443 1.0975328364992778 0.9791333110461546 1.0 13.812886121475753 -6.858962557851673 7.271329584399162 1.067898488148899 1.0153457967690533 0.21440390929761932 0.057703670409264496 0.37209204902801934 24.16211259526226 0.009341444593556418 0.017749488797457098 1.383685666535633e-07 6.858962557851673 -0.05255269137984575 AITSLLGGGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AITSLLGGGSPK 12 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AITSLLGGGS(1)PK;AITSLLGGGS(1)PK 173.44 8.343199999999999e-16 263880000.0 25175.0 24725.0 25249.0 26172.0 30927.0 28171.0 28815.0 29715.0 30268.0 30227.0 33895.0 True False 27730.747467144523 26808.662522395043 26962.54897457123 27788.58499907538 28754.79421235789 27941.584716065296 29911.57059317304 29122.311014033472 28995.941219805314 28318.46206142791 29726.129878108015 0.9328744636740284 0.9018551231634914 0.9070319306660891 0.9348201435243156 0.9673238437114725 0.9399671208677266 1.0062383066960088 0.979687269531873 0.975436134427965 0.9526454394684997 1.0 14.859444026814366 -6.992181561683663 0.8681818447195703 0.9888281266137873 0.9099043257829463 0.6507105896755143 0.01958393649040593 0.20427047481954885 0.2941701149261893 0.002844804593278666 0.008602893278228675 1.0181656434892168e-07 6.992181561683663 -0.07892380083084094 AITSLLGGGSPK ddPTM_A549_MK2206_60min_R1 2 AITSLLGGGSPK 12 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 0 ; 134.2 1.263e-07 5786900.0 5690.9 5923.6 6624.8 6166.1 8250.6 6944.299999999999 6655.8 5735.799999999999 9058.6 8447.7 9062.0 False True 6651.384790853342 6225.0859382587205 7564.29625637103 7676.794776806746 7036.947669503733 7679.141216746732 7865.072705929324 6548.867215150792 7006.841563611705 6539.358702817547 6811.655301523374 0.9764711360784524 0.9138873978057181 1.1104931065257124 1.1270086986183652 1.0330745403294224 1.1273531728813924 1.154649253048721 0.9614208184736225 1.0286547474069452 0.9600249004606957 1.0 12.733789715074135 -2.142276950477929 17.36832309282244 1.0317168648862893 0.08982850683765442 0.0 0.0783809058507593 0.0 0.0 0.010048544845841757 0.0 0.0072064777406396505 2.142276950477929 -0.9418883580486349 AITVFS(ph)PDGHLFQVEYAQEAVKK ddPTM_A549_MK2206_60min_R1 1 AITVFSPDGHLFQVEYAQEAVKK 23 1 O14818;O14818-4;Q8TAA3-2;Q8TAA3-5;Q8TAA3;F5GY34 O14818 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like 1 AIT(0.027)VFS(0.973)PDGHLFQVEYAQEAVKK 81.34100000000001 1.1559e-05 2133000.0 1207.8 1026.4 1215.5 1415.7 1836.4 874.88 1292.5 1162.9 1996.2 1719.9 1813.4 True False 1411.647112125088 1078.6393758911388 1387.87617733652 1762.546563553187 1566.2679926643693 967.4592209016575 1527.3305196090116 1327.7446362318879 1544.0638872763657 1331.3733954775732 1363.0827327060792 1.0356283432059883 0.791323483168006 1.0181892441563096 1.2930591234576545 1.1490630429709234 0.7097582543511467 1.120497298485219 0.9740748704196143 1.1327734188305585 0.9767370413639129 1.0 10.412657414261167 -8.735377100877878 24.98091268844555 1.062698600516683 1.011889058811416 0.0 0.156049356070413 892.2063285849574 855186.262009169 0.02676877268362101 0.030347922751346804 1.8391743402429447e-09 8.735377100877878 -0.05080954170526697 AITVFS(ph)PDGHLFQVEYAQEAVKK ddPTM_A549_PD325901_60min_R1 1 AITVFSPDGHLFQVEYAQEAVKK 23 1 O14818;O14818-4;Q8TAA3-2;Q8TAA3-5;Q8TAA3;F5GY34 O14818 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like 1 AIT(0.013)VFS(0.987)PDGHLFQVEYAQEAVKK 148.1 5.6506e-28 4944100.0 1711.8 1970.4 1995.1 2227.8 2256.4 2451.4 2596.4 2151.8 2320.6 2500.4 2703.1 True False 1885.5806758394447 2136.452523119403 2130.4994835109146 2365.406146299104 2097.918248157416 2431.43661115908 2695.2074228045967 2108.8806609455564 2223.0732521038813 2342.5243172790665 2370.6358363627023 0.7953902691070914 0.9012149780024376 0.8987038206508208 0.9977939715651889 0.8849601511872358 1.0256474545199084 1.136913304634713 0.8895844011964485 0.9377540059104024 0.9881417809296397 1.0 11.211058345869077 -4.9534675398896635 0.7869735612824852 0.9768702861708665 0.6102274830191932 0.4216854891252738 0.06639149490368039 2.9078967562625877 0.9300352320930296 0.010470304607823807 1.0433591427266695 1.113095584867951e-05 4.9534675398896635 -0.3666428031516733 AIVAIENPADVSVISSR ddPTM_A549_MK2206_60min_R1 2 AIVAIENPADVSVISSR 17 0 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 RPSA 40S ribosomal protein SA 0 ; 121.28 2.1554000000000002e-09 6823700.0 2528.7 2430.9 2285.8999999999996 2800.2 3417.5 3111.2 2597.2 2801.3 4051.2000000000003 3793.5 3830.8 False True 2955.4827392206585 2554.6224267866037 2610.0749928206938 3486.2491257057527 2914.790277134876 3440.4251189525844 3069.077621298665 3198.392853621452 3133.609668437039 2936.5457152998283 2879.5066352985805 1.0263851115988833 0.887173655191703 0.90643131737394 1.2107105720714055 1.012253363615756 1.1947967324603304 1.065834536957206 1.110743352494413 1.0882453369002605 1.0198086294721573 1.0 11.491605931127896 -6.214869812770547 24.99966568895347 1.0670546992501118 0.9347143281315311 0.42176992851315676 0.07416786045389383 336.6691121582937 180731.6242705421 0.010345949752631598 0.02737273211310213 6.097196437825427e-07 6.214869812770547 -0.13234037111858066 AIVDGNLK ddPTM_A549_PD325901_60min_R1 1 AIVDGNLK 8 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-4;O75369-5;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315-2;Q14315 O75369-8;Q60FE5;Q14315-2 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 95.90899999999999 0.0069196 3774700.0 4047.3 4084.3 3931.8 3709.7 4957.8 4143.8 4045.3 3948.1 5500.4 3952.4 4467.0 False True 4458.178916535216 4428.498294852095 4198.635591834098 3938.839743660017 4609.58123148149 4110.054266672511 4199.246105173096 3869.3520482754684 5269.237316156247 3702.8447894791966 3917.5873186460685 1.1379909505312513 1.130414700337196 1.0717401426766822 1.00542487589563 1.1766377764043245 1.049128949113752 1.0718959817912546 0.987687505996096 1.3450210263538718 0.9451850050298081 1.0 11.935749715779531 AIVQLVNER ddPTM_A549_PD325901_60min_R1 1 AIVQLVNER 9 0 M0R389;Q15102 M0R389 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma 0 63.486000000000004 0.018573 898990.0 942.0 877.92 908.27 1004.8 1184.8 1119.9 1215.9 1195.5 1192.9 1112.0 946.61 False True 1037.6311465362526 951.9053994605081 969.9106640712032 1066.8642139336293 1101.5837353381073 1110.7799057016614 1262.1717398660094 1171.654814648393 1142.7665614214936 1041.7881302248923 830.1829710551945 1.249882474964987 1.1466212059861933 1.168309514754813 1.2850952755361917 1.3269168047833504 1.337994086158883 1.5203536857203186 1.4113211852071295 1.3765237318334698 1.2548897852008931 1.0 9.697285529056417 -10.750492069837373 1.0270768765208813 1.0019554521423693 1.3155069389992087 0.15689931212803832 0.12384922423921448 0.3448324596962278 0.6522753721303874 0.07692577804519303 0.02016832151337387 1.7762657023806773e-11 10.750492069837373 0.3135514868568394 AIY(ph)SSFKDDVDLK ddPTM_A549_PD325901_60min_R1 1 AIYSSFKDDVDLK 13 1 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 AIY(0.618)S(0.191)S(0.191)FKDDVDLK 65.495 0.0045452 2805500.0 2062.9 2357.1 2378.9 2159.3 3174.8 2378.3 2543.8 2012.7 3226.2 2500.4 2635.7 True False 2272.324089373286 2555.741089243168 2540.3464594878005 2292.675056873891 2951.8130004654145 2358.9319133228537 2640.605701020773 1972.555119567394 3090.614033412712 2342.5243172790665 2311.5256090788976 0.9830408455992695 1.1056512111330603 1.0989912677195404 0.9918449736697843 1.2769977493961921 1.0205086649517359 1.1423648912429778 0.853356377199482 1.337045119151532 1.013410497412798 1.0 11.174629630747283 -3.103494685717219 0.4781556243196998 1.1332314292815555 1.2016648318766544e-10 0.0 0.13606621504413854 70.67585732287202 2.0432769792382475 0.0295147608674476 70.46373856973428 0.000787962073359835 3.103494685717219 -1.133231429161389 AIYS(ph)SFKDDVDLK ddPTM_A549_MK2206_60min_R1 1 AIYSSFKDDVDLK 13 1 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 AIYS(0.5)S(0.5)FKDDVDLK 71.692 0.00058875 2610600.0 1861.7 2307.1 2492.8 2241.5 2744.6 1945.9 2225.4 2264.0 3015.8 2898.5 2917.0 True False 2175.9094458049976 2424.521535579156 2846.3165239526775 2790.6676006247603 2340.872975749635 2151.813846416121 2629.7263739558157 2584.928933209212 2332.7261152429937 2243.726836904324 2192.6283948955715 0.992374928132147 1.1057603473636621 1.298129920500386 1.272749913811853 1.067610444706078 0.9813855605562408 1.199348863709786 1.178917932116046 1.063894876429389 1.023304652137001 1.0 11.098445610458922 -9.093910631750868 1.985110964822456 1.0221426869421941 1.1400082122812116 0.19711310883318744 0.09683986615977506 0.3527581585161858 2.8522748990094815 0.020465111861169245 0.019694705154749137 8.055441874153987e-10 9.093910631750868 0.11786552533901751 AIYS(ph)SFKDDVDLK ddPTM_A549_PD325901_60min_R1 3 AIYSSFKDDVDLK 13 1 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 AIY(0.291)S(0.354)S(0.354)FKDDVDLK;AIYS(0.5)S(0.5)FKDDVDLK;AIY(0.044)S(0.51)S(0.446)FKDDVDLK 85.42 8.4009e-05 12814800.0 5653.7 5848.599999999999 6256.4 6093.499999999999 7285.9 5906.5 6127.0 6154.5 6898.1 6882.3 7144.599999999999 True False 6227.659461966039 6341.482047663482 6680.996926789476 6469.881655657412 6774.163518990475 5858.3994222938345 6360.1663378230505 6031.743669388152 6608.1968457889225 6447.750403459332 6265.859493350953 0.993903465051291 1.0120689834160463 1.0662538689032284 1.0325609220128473 1.0811227934777201 0.9349713999349176 1.0150509031637514 0.9626362793147158 1.054635338184848 1.0290288842738005 1.0 12.613296703506299 -3.7618194293652945 15.176234150116464 1.0203500903235907 1.0239393280982148 0.0 0.04159435655199969 0.0 0.0 0.0053807105076529435 0.0 0.00017305357305059891 3.7618194293652945 0.0035892377746240545 AKADS(ph)PVNGLPK ddPTM_A549_MK2206_60min_R1 2 AKADSPVNGLPK 12 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 AKADS(1)PVNGLPK;AKADS(1)PVNGLPK 99.566 6.9184e-05 63772000.0 3578.6 4014.6000000000004 3815.6 3357.3 4282.1 3265.5 3298.4 3353.1 4938.9 4922.3 5748.9 True False 4182.580191630102 4218.9259922569845 4356.709454747208 4179.8386507149235 3652.208762463568 3611.053042536533 3897.676584818848 3828.41219343808 3820.2470358026444 3810.349011314181 4321.28946843166 0.9679009522933208 0.9763118215239984 1.0081966243118639 0.9672665257094953 0.8451664229263207 0.83564247868984 0.9019707226957524 0.8859420831225959 0.884052564335418 0.8817620386576611 1.0 12.077246160043158 -6.54048722516377 24.75029583549595 0.9213907286531496 0.9840836229705006 0.35848277751103197 0.04752449698040689 282.37450021253835 396901.72580021736 0.008944007261611995 0.018621650450836535 2.880797787620498e-07 6.54048722516377 0.06269289431735092 AKADS(ph)PVNGLPK ddPTM_A549_PD325901_60min_R1 1 AKADSPVNGLPK 12 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 AKADS(1)PVNGLPK 108.25 3.2727e-05 50271000.0 11944.0 10854.0 12127.0 11293.0 14542.0 12078.0 12656.0 14685.0 12758.0 12313.0 12838.0 True False 13156.546087291927 11768.704672116306 12950.011145575085 11990.542961736148 13520.620087176532 11979.640772448132 13137.631005628933 14392.096154840354 12221.825627140093 11535.555078650268 11259.007386787147 1.168535167916455 1.045270179494447 1.1501911936546372 1.0649733630877163 1.20087141101297 1.0640050548778106 1.1668551724236738 1.2782739774849068 1.0855153751371411 1.024562351045942 1.0 13.458792022128932 -9.578276071532327 1.377774149315495 1.0202223332831508 1.136102348143479 0.34418736015387397 0.06598993782796138 0.2883517580175214 1.1162365004807862 0.016383115949147608 0.012432793269366488 2.6407295694609054e-10 9.578276071532327 0.11588001486032828 AKDPDAELACS(ph)MQYDDQELEQLSR ddPTM_A549_MK2206_60min_R1 2 AKDPDAELACSMQYDDQELEQLSR 24 1 Q9HCC9-5;Q9HCC9-4;Q9HCC9-3;Q9HCC9-2;Q9HCC9 Q9HCC9-5 ZFYVE28 Lateral signaling target protein 2 homolog 1 AKDPDAELACS(0.943)MQY(0.057)DDQELEQLSR;AKDPDAELACS(0.943)MQY(0.057)DDQELEQLSR 67.69 6.1091e-05 2922200.0 2000.37 2009.1 1475.74 1516.98 2819.6 1794.02 1969.8899999999999 1870.25 3018.1000000000004 2440.6000000000004 3328.8 True False 2337.983551648999 2111.35460844007 1685.0221225360724 1888.6401680998204 2404.8405751015334 1983.8620056259047 2327.793514330827 2135.363664900411 2334.5051689153393 1889.2667649296861 2502.167089793755 0.9343834635127067 0.8438103982152932 0.6734250999500448 0.7548017779482082 0.9611031113432781 0.7928575248703424 0.9303109787614938 0.8534057032443911 0.9329933154495147 0.7550521996056673 1.0 11.288962417718142 -8.662113816484473 0.47893912568501507 0.9949780328399853 0.8098441836663222 0.0 0.10533615559390364 0.5859319623307885 0.3216443632487712 0.03175131822324648 0.0328049493522008 2.1771391300697543e-09 8.662113816484473 -0.18513384917366316 AKDPDAELACSMQY(ph)DDQELEQLSR ddPTM_A549_PD325901_60min_R1 1 AKDPDAELACSMQYDDQELEQLSR 24 1 Q9HCC9-5;Q9HCC9-4;Q9HCC9-3;Q9HCC9-2;Q9HCC9 Q9HCC9-5 ZFYVE28 Lateral signaling target protein 2 homolog 1 AKDPDAELACS(0.473)MQY(0.527)DDQELEQLSR 56.468 0.00078309 6643800.0 1325.6 1302.2 1634.7 1195.5 1699.9 1700.8 1184.6 1535.4 1414.8 1618.4 1656.5 True False 1460.1739361448563 1411.9409640712977 1745.6405722496565 1269.3433198225061 1580.5048883366383 1686.9492486984423 1229.6806012379927 1504.7752425020024 1355.3408760995303 1516.2139478021277 1452.7610014186725 1.0051026526172886 0.9719017530705238 1.2016020326433439 0.8737454533697886 1.0879317979992713 1.161202184702836 0.846443840409514 1.0358037151551673 0.9329413955743525 1.0436774846801993 1.0 10.50458166455729 -7.759331854954122 24.99988868789568 0.9653520851890581 1.0472562841486277 0.13774141425161324 0.09700537082097738 78.95781037277968 936604.461041494 0.013605882161596403 0.019638923615875513 1.740476424864051e-08 7.759331854954122 0.08190419895956957 AKDPFAHLPK ddPTM_A549_MK2206_60min_R1 2 AKDPFAHLPK 10 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 59.542 0.032046 15489400.0 4315.3 4281.9 3194.3 2950.7 5682.6 4648.4 3502.8999999999996 3901.0 5733.3 5672.6 5323.9 False True 5043.617141044374 4499.830420526371 3647.2997723291205 3673.621632461958 4846.6970676946985 5140.290602641805 4139.331587727973 4453.978696311459 4434.716704198774 4391.155720208201 4001.8286978349456 1.2603280954462275 1.1244435382656066 0.9114082704995267 0.9179857284869408 1.211120573531006 1.2844854167353006 1.034360013952476 1.1129858453764236 1.108172547864937 1.0972872783344993 1.0 11.96644369726471 -10.619924820005968 0.8113275032610818 0.9972940197754101 1.1029997539945398 0.009455990414123816 0.1184490884916833 1.4194620468796546 1.6016820127173792 0.09298018464702502 0.022843018157909137 2.3992482129329463e-11 10.619924820005968 0.10570573421912965 AKDPFAHLPK ddPTM_A549_PD325901_60min_R1 2 AKDPFAHLPK 10 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 70.977 0.010164 24523000.0 5130.8 5096.5 4983.9 4907.9 5934.0 5703.200000000001 5589.799999999999 5636.299999999999 5588.5 5837.5 6018.4 False True 5651.67503890467 5525.999941168307 5322.137424625352 5211.049836350381 5517.21631118866 5656.755030089934 5802.522897855925 5523.879574908186 5353.634779532248 5468.919253766017 5278.174953780947 1.0707631119457628 1.046952779996395 1.0083291045161193 0.9872825137441718 1.0452886384973805 1.071725564162627 1.0993426607997085 1.0465510566206662 1.0142965753147772 1.0361383056937954 1.0 12.365823456616326 -8.84675433496684 3.7626164943045244 1.0060956704675525 1.0462919160336182 0.1462256804430545 0.030051303966562554 0.24118387519766168 6.385850095324464 0.005681605612107739 0.006027009352948068 1.423133575827531e-09 8.84675433496684 0.0401962455660656 AKDQNES(ph)LDEEMFYK ddPTM_A549_MK2206_60min_R1 5 AKDQNESLDEEMFYK 15 1 Q96AC1;Q96AC1-3;A0A0U1RRM8;H0YJ34 Q96AC1 FERMT2 Fermitin family homolog 2 1 AKDQNES(0.883)LDEEMFY(0.117)K;AKDQNES(0.965)LDEEMFY(0.035)K;AKDQNES(0.995)LDEEMFY(0.005)K;AKDQNES(1)LDEEMFYK;AKDQNES(0.977)LDEEMFY(0.023)K 100.02 1.8609999999999998e-06 43686400.0 12833.400000000001 16140.7 16357.5 14932.2 22261.0 16985.5 15030.7 16871.0 23747.700000000004 22273.9 24367.7 True False 14999.364173494037 16962.192687496212 18677.23946588412 18590.58967033193 18986.436388968377 18782.894335937606 17761.583629467834 19262.515915270586 18368.883867284323 17242.210520104603 18316.52757569313 0.8188978020811587 0.9260594082257064 1.0196932463699981 1.0149625573682697 1.0365740073006113 1.025461526936108 0.969702557216045 1.0516467073613247 1.0028584179711373 0.9413471220923886 1.0 14.160858404591353 -5.427299118853953 2.3695944963469544 1.0084698493407522 0.8050438523017712 0.7852850976013738 0.029478102114252003 0.0937446409006551 0.7933455202287464 0.0029312929816160413 0.03335536397611082 3.7385300958447175e-06 5.427299118853953 -0.203425997038981 AKDQNES(ph)LDEEMFYK ddPTM_A549_PD325901_60min_R1 4 AKDQNESLDEEMFYK 15 1 Q96AC1;Q96AC1-3;A0A0U1RRM8;H0YJ34 Q96AC1 FERMT2 Fermitin family homolog 2 1 AKDQNES(1)LDEEMFYK;AKDQNES(0.992)LDEEMFY(0.008)K;AKDQNES(1)LDEEMFYK;AKDQNES(1)LDEEMFYK 169.98 9.8025e-28 161211000.0 41603.4 42652.7 45965.4 40717.9 51811.0 47525.0 47821.0 49721.0 46241.0 48216.8 50115.0 True False 45826.94654119564 46247.19271866367 49084.88845640451 43232.95220593961 48171.97409824671 47137.97215686355 49640.85432365527 48729.275649630064 44297.65157740908 45172.383019269415 43951.17270515956 1.0426785844514197 1.0522402446211536 1.116804977780315 0.983658672681204 1.096033874258642 1.0725077229015525 1.1294546031038617 1.1087138897640743 1.0078832679749827 1.0277856138743369 1.0 15.423614039419764 -8.81750052740032 9.465906454383068 1.003640430694786 1.075208402095872 0.33731453052418936 0.039099204534748806 0.2435000343066314 39.04358343009376 0.006536405316654813 0.006955786205346034 1.5222972842256582e-09 8.81750052740032 0.07156797140108617 AKDT(ph)SSEEVNLSHIVPCEPVPEEKPK ddPTM_A549_PD325901_60min_R1 1 AKDTSSEEVNLSHIVPCEPVPEEKPK 26 2 Q8N0X7 Q8N0X7 SPG20 Spartin 1 AKDT(0.331)S(0.331)S(0.331)EEVNLS(0.008)HIVPCEPVPEEKPK 67.913 0.00014669 2120500.0 835.24 773.72 862.7 1044.6 1345.2 946.14 1017.2 981.19 867.19 964.53 1119.1 True False 920.0329499288099 838.9240997705762 921.2480098365321 1109.1225695412713 1250.7177926880668 938.4349495317177 1055.9101026331975 961.6193957213359 830.7450200344585 903.6294111922799 981.4577945593941 0.9374146856124774 0.8547734853409509 0.938652701056909 1.1300766835716964 1.274346996499785 0.9561643452564452 1.0758588993704281 0.9797868039277591 0.8464398822237741 0.9207012427854285 1.0 9.938782418862958 -11.679932353803387 3.8526470204067804 1.0013008273159882 0.965599917446681 0.0 0.12395366943299266 1.6818355893994883 45.83814563230639 0.13607428979943972 0.019281116798698213 2.0896215873136524e-12 11.679932353803387 -0.035700909869307185 AKEAAGPAPS(ph)PMR ddPTM_A549_MK2206_60min_R1 1 AKEAAGPAPSPMR 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 AKEAAGPAPS(1)PMR 41.912 0.020444999999999998 27770000.0 1105.0 1566.2 1448.8 1188.6 1225.1 1277.6 1408.5 1102.3 1622.4 2246.5 2102.0 True False 1291.4969853437835 1645.912890218922 1654.26162544233 1479.8070533582818 1044.8894128801564 1412.7947839977573 1664.4062180806898 1258.5544006521714 1254.9289904404245 1739.0140897379895 1580.0153877512823 0.817395194601158 1.0417068738561 1.0469908320302606 0.9365776212245505 0.6613159726040829 0.8941652055733978 1.0534113977519641 0.7965456605099129 0.7942511194314829 1.1006311098102646 1.0 10.625722893522923 -6.526016173628649 24.99968349938596 0.8862009469350831 0.9786295276603536 0.0430651109550414 0.13096422344377923 172.5076327173871 1374577.749600553 0.017798960843869872 0.03720523077927837 2.978405508098952e-07 6.526016173628649 0.09242858072527049 AKEAAGPAPS(ph)PMR ddPTM_A549_PD325901_60min_R1 1 AKEAAGPAPSPMR 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 AKEAAGPAPS(1)PMR 48.547 0.007336 54653000.0 3567.0 3033.2 3444.9 3367.2 4085.8 4292.9 3764.7 4078.3 3884.4 4199.4 4721.8 True False 3929.1192141133893 3288.8184090163268 3678.691629866546 3575.1842965339547 3798.827503244799 4257.940045706457 3907.9677186228855 3996.955107135544 3721.1521763648675 3934.2491673259115 4141.04853395635 0.9488223047604603 0.7941994357342621 0.8883478664163181 0.8633524256520196 0.91735884573548 1.0282275155172906 0.9437145415171506 0.9652036372818988 0.8986014401549854 0.9500611101428307 1.0 12.015780396157083 -6.951575514802518 4.784085398577792 0.9567633010064704 0.8700365296718314 0.4558983874326671 0.04579767099858857 0.16112169418513259 8.11532126323675 0.007356168884999596 0.014033286615969294 1.1179554184238303e-07 6.951575514802518 -0.08672677133463902 AKEES(ph)PSK ddPTM_A549_PD325901_60min_R1 2 AKEESPSK 8 1 Q6ZN18-2;Q6ZN18;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 AKEES(0.796)PS(0.204)K;AKEES(0.898)PS(0.102)K 69.01 0.0020268 35195000.0 9243.0 8991.099999999999 7595.2 7048.200000000001 7303.3 6286.0 4177.6 5627.2 6139.8 7310.5 9461.9 True False 10181.34255566303 9748.811551268196 8110.6559456478835 7483.551306376402 6790.341403017217 6234.808900116661 4336.580854070435 5514.961081546999 5881.765557729644 6848.913782382266 8298.146283925953 1.2269418020968068 1.1748179915979882 0.9774057564348738 0.9018341024997988 0.81829617973481 0.751349601078242 0.5225963372651881 0.6646015739960907 0.7088047566868042 0.8253546693493529 1.0 13.018573374654771 -5.9318676997515425 1.3810740778283495 0.8080012663137788 1.2503143664927525 0.6603354909197172 0.1188408444053721 0.3524831265764749 1.1256502524408698 0.023517715226591122 0.15301463822598252 1.1698557129074184e-06 5.9318676997515425 0.44231310017897374 AKEES(ph)PSKAGMNK ddPTM_A549_MK2206_60min_R1 1 AKEESPSKAGMNK 13 2 Q6ZN18-2;Q6ZN18;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 AKEES(0.889)PS(0.111)KAGMNK 72.175 0.00038083 9208600.0 1709.6 2297.4 1867.5 1984.3 2935.1 2396.0 2347.2 1924.4 3241.1 3593.5 3222.7 True False 1998.138684292972 2414.327847011208 2132.339581387044 2470.453589078613 2503.350678103459 2649.5431296639204 2773.65585735108 2197.1895932278308 2506.996024973164 2781.7258542058603 2422.414648004786 0.8248541123786269 0.9966616776363045 0.8802537514142503 1.0198310149393266 1.0334113031248946 1.093761190655864 1.1449963199469557 0.9070245653598317 1.034916143294478 1.1483277053732397 1.0 11.242230118901197 -6.27425136081639 21.457165363413484 1.025084971089343 0.9101970453000361 0.39854099700592116 0.0766937109773782 86.66831275241775 145151.05245205856 0.009047578728395941 0.021209530753162068 5.318003749319312e-07 6.27425136081639 -0.11488792578930695 AKEES(ph)PSKAGMNK ddPTM_A549_PD325901_60min_R1 1 AKEESPSKAGMNK 13 2 Q6ZN18-2;Q6ZN18;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 AKEES(0.5)PS(0.5)KAGMNK 48.659 0.0065751 13609000.0 3271.0 2755.7 3054.8 3025.1 3746.1 3825.9 3379.9 4014.1 3883.8 3858.9 3951.7 True False 3603.0695120170703 2987.93251012999 3262.117098004681 3211.953556499425 3482.98685934342 3794.743138873101 3508.5239440522478 3934.0356264994684 3720.577392278312 3615.248395436006 3465.6659518902306 1.0396470871786987 0.8621524842866991 0.9412670301433608 0.9267925994851215 1.0049978583318864 1.094953521646651 1.0123664521500237 1.1351456490934395 1.0735533787522276 1.043161241049268 1.0 11.758916887580044 -6.917529387628413 4.09624673055247 1.0460049154942581 0.9370398425365288 0.5077602172612778 0.0528768420283245 0.15189491738092617 4.897520403380207 0.007917671084278698 0.015358170557997868 1.2091233618015779e-07 6.917529387628413 -0.10896507295772928 AKEET(ph)PKTDNTK ddPTM_A549_MK2206_60min_R1 1 AKEETPKTDNTK 12 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 AKEET(0.915)PKT(0.081)DNT(0.004)K 65.704 0.0019817999999999997 13564000.0 2472.0 2975.6 2880.4 2208.2 1719.6 1392.5 1567.4 1916.3 1937.0 3639.5 4293.0 True False 2889.2131654025648 3127.045330184794 3288.8840322501947 2749.209099129864 1466.6491179403451 1539.8534257333085 1852.1762912457762 2187.9413934226204 1498.2725927533909 2817.334422257474 3226.9296192275237 0.8953443385276549 0.9690466477956093 1.0191991832277711 0.8519581842593709 0.4545029768239686 0.4771884135799421 0.5739748026141203 0.6780257556241277 0.4643028418797847 0.8730696837856352 1.0 11.655946397008568 -6.531065039146498 24.559138838329687 0.6841514130947097 0.9575812430823846 0.4120849057077166 0.16496115027055067 167.56242787960466 502691.925912921 0.03210250061125211 0.06692335688871244 2.943980715621939e-07 6.531065039146498 0.27342982998767484 AKEET(ph)PKTDNTK ddPTM_A549_PD325901_60min_R1 3 AKEETPKTDNTK 12 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 AKEET(0.826)PKT(0.164)DNT(0.01)K;AKEET(0.536)PKT(0.198)DNT(0.267)K;AKEET(0.949)PKT(0.035)DNT(0.016)K 59.513000000000005 0.003399 53186000.0 8753.300000000001 8569.7 8615.0 8886.4 10041.9 8959.2 7828.0 8727.8 10857.4 10282.6 11917.8 True False 9641.928572161127 9291.898694364769 9199.665706203456 9435.292745521298 9336.59158667432 8886.239245613291 8125.898823645962 8553.717182173352 10401.101235625556 9633.354881160505 10451.986153158745 0.922497258499256 0.8890079414769048 0.8801834954041898 0.9027272527212268 0.8932839605659699 0.8501962321226132 0.7774502094216987 0.8183819856657858 0.9951315552099339 0.9216769655066145 1.0 13.351489498031995 -8.775602047600735 24.966427341035082 0.9977010318547657 0.8664678067101993 0.502312955788885 0.04488573814365435 96.26157815362572 169692.58138649655 0.007322788398027983 0.007813770255122183 1.6764783618371147e-09 8.775602047600735 -0.13123322514456637 AKEFTNVYIK ddPTM_A549_MK2206_60min_R1 2 AKEFTNVYIK 10 1 P11940-2;E7EQV3;A0A087WTT1;P11940;E7ERJ7;H0YAR2;H0Y5F5;B1ANR0;H0YCC8;H0YBN4;Q13310;Q13310-2;Q13310-3 P11940-2 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 0 ; 51.927 0.024458 3152500.0 3106.3 4204.200000000001 4605.9 4466.9 6099.9 4238.2 4222.4 4094.7 5788.3 6038.799999999999 5970.8 False True 3630.5674982564683 4418.175822409903 5259.085878399246 5561.290700526759 5202.612790488669 4686.683510910529 4989.5554243691195 4675.136264492825 4477.259292015722 4674.630885871253 4488.085574303218 0.8089345530850577 0.9844232578154064 1.1717882360600327 1.2391231424748752 1.1592053458776534 1.0442500334094327 1.111733575878565 1.0416771665987332 0.9975877727578364 1.0415645621010683 1.0 12.131884468729535 -8.557078809715682 3.495143551574922 0.9989336151833329 1.082950623361918 0.05087697144264314 0.10750297984266452 0.420789622149809 10.826458669476446 0.01909107733382852 0.022098354927206052 2.7728168867934037e-09 8.557078809715682 0.08401700817858504 AKEFTNVYIK ddPTM_A549_PD325901_60min_R1 2 AKEFTNVYIK 10 1 P11940-2;E7EQV3;A0A087WTT1;P11940;E7ERJ7;H0YAR2;H0Y5F5;B1ANR0;H0YCC8;H0YBN4;Q13310;Q13310-2;Q13310-3 P11940-2 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 0 ; 79.693 0.0012553 8552400.0 5787.1 6150.1 6850.3 6949.6 7777.3 9262.0 6493.6 7106.9 7443.4 6689.5 6926.0 False True 6374.60213176215 6668.390510777831 7315.202552200295 7378.861008313249 7231.049278228448 9186.573342806314 6740.717501434262 6965.147304244809 7130.579783120753 6267.123828362789 6074.145907531376 1.049464769006987 1.0978317959912103 1.2043178849441407 1.2147981165819786 1.1904635463666784 1.5124057740226189 1.1097391475361826 1.1466875195751676 1.1739230324183516 1.0317703795346995 1.0 12.568465848673503 -10.33570063016996 0.6475780869590451 0.9941682232270818 1.1974935943124798 0.25677906497763203 0.11361018785483772 0.8479039831464018 0.6297360509887463 0.09006502461332752 0.02489346732672272 4.6163568169739514e-11 10.33570063016996 0.20332537108539805 AKEQEAEPEEQEEDS(ph)SSDPR ddPTM_A549_MK2206_60min_R1 1 AKEQEAEPEEQEEDSSSDPR 20 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 AKEQEAEPEEQEEDS(0.706)S(0.147)S(0.147)DPR 92.275 8.805599999999999e-07 6855200.0 858.71 1175.9 1065.4 1209.0 1325.7 1318.0 1248.0 1019.2 1865.9 2077.8 1770.6 True False 1003.6392545561638 1235.7482873250106 1216.4897402997362 1505.2050542740724 1130.6912861441706 1457.4698851824066 1474.7454456263415 1163.6747211690945 1443.276629230023 1608.4235369052283 1330.911153925986 0.7540993638798354 0.9284979569671054 0.9140277596376558 1.1309583286862883 0.8495618079454837 1.0950917954839372 1.108072046188858 0.8743444051366094 1.0844274803562777 1.2085130792995633 1.0 10.378198550826546 -4.391394502328337 0.7369489675662575 1.031280027447028 1.5729913978515117e-11 0.4029415818413943 0.10409121987786499 5.277804125696364 0.7992052187837612 0.013227655249241906 6.113533840275885 4.060742937694406e-05 4.391394502328337 -1.031280027431298 AKEQEAEPEEQEEDS(ph)SSDPR ddPTM_A549_PD325901_60min_R1 2 AKEQEAEPEEQEEDSSSDPR 20 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 AKEQEAEPEEQEEDS(0.682)S(0.159)S(0.159)DPR;AKEQEAEPEEQEEDS(0.333)S(0.333)S(0.333)DPR 73.109 0.00012896 9637500.0 1980.7 1919.7 2179.1 1845.3 2666.3 2622.0 2025.6 2449.1 2116.1 2430.3 2500.9 True False 2181.7792058857276 2081.479856187735 2326.986829992798 1959.2799900196326 2479.0282862356466 2600.647301321331 2102.6853164508498 2400.2507792182164 2027.1676759359746 2276.8504432424065 2193.3051545112944 0.9947449407111183 0.949015166406028 1.0609498752175641 0.893300225912337 1.130270578691097 1.1857206900609318 0.9586834335960714 1.094353320732077 0.9242524560553737 1.0380910465464745 1.0 11.098890832776236 -8.772877705799718 24.99918014036616 0.9642303293041178 1.0326351597068057 0.03626897202872448 0.08486507161424475 344.0091142859123 751850.8915801645 0.0144364618935215 0.015432982561902637 1.687028013455244e-09 8.772877705799718 0.06840483040268797 AKEQEAEPEEQEEDSS(ph)SDPR ddPTM_A549_MK2206_60min_R1 1 AKEQEAEPEEQEEDSSSDPR 20 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 AKEQEAEPEEQEEDS(0.286)S(0.357)S(0.357)DPR 75.71 9.803600000000001e-05 4419600.0 954.04 836.46 1030.9 901.63 1078.7 934.86 965.05 837.17 1092.3 1518.9 1698.4 True False 1115.0586279614336 879.0322411904732 1177.097121527124 1122.5293904757089 920.0246589452499 1033.7862646901553 1140.3870931904646 955.8414112255996 844.8957940446718 1175.7794350781357 1276.6404065446152 0.8734320347727966 0.6885511665494612 0.9220271546261666 0.879283927346443 0.7206607704321456 0.8097709107361136 0.8932719717661632 0.748716244860761 0.6618118850957307 0.9209950030177471 1.0 10.318136500578762 -11.054652242884822 1.3815157464528625 0.9992133695258553 0.7848947531338999 0.31842390537788867 0.086666575318503 0.32501490882823 1.113062639666486 0.0637665971016978 0.014413405518209734 8.817546469235315e-12 11.054652242884822 -0.21431861639195537 AKESDFSDTLS(ph)PSKEK ddPTM_A549_MK2206_60min_R1 2 AKESDFSDTLSPSKEK 16 2 A0A590UJP6;H7C5G9;H7BZW9;H7BZK0;A0A590UJS6;A0A590UJU9;H7C3M8;A0A5F9VB99;A0A590UJK3;Q14BN4-4;Q14BN4-6;Q14BN4-2;Q14BN4-3;Q14BN4 A0A590UJP6 SLMAP Sarcolemmal membrane-associated protein 1 AKESDFS(0.001)DT(0.013)LS(0.935)PS(0.051)KEK;AKESDFS(0.001)DT(0.006)LS(0.89)PS(0.104)KEK 86.625 4.2975e-06 36899300.0 5691.5 6779.1 7139.9 6281.8 8286.2 7059.700000000001 6291.4 5502.7 9830.9 9798.2 9585.4 True False 6652.086056184749 7124.127234122779 8152.445181871681 7820.84128200072 7067.31095666277 7806.752768150412 7434.465942799329 6282.7245763119845 7604.216846721383 7584.779814854561 7205.080636418243 0.9232493558172868 0.9887644002363717 1.13148562705391 1.0854620061391265 0.9808788150046354 1.0835066478910733 1.0318366050230796 0.8719853244328469 1.0553964945632528 1.0526988104084665 1.0 12.814798861225848 -11.326856073984791 1.9355277869178495 0.9998580732229294 1.0253114758268922 0.0 0.07331632465272846 1.764099664209713 11.929723325823204 0.05519904219124497 0.010649954300120557 4.711334350423405e-12 11.326856073984791 0.025453402603962783 AKESDFSDTLS(ph)PSKEK ddPTM_A549_PD325901_60min_R1 1 AKESDFSDTLSPSKEK 16 2 A0A590UJP6;H7C5G9;H7BZW9;H7BZK0;A0A590UJS6;A0A590UJU9;H7C3M8;A0A5F9VB99;A0A590UJK3;Q14BN4-4;Q14BN4-6;Q14BN4-2;Q14BN4-3;Q14BN4 A0A590UJP6 SLMAP Sarcolemmal membrane-associated protein 1 AKESDFSDT(0.006)LS(0.955)PS(0.039)KEK 77.87100000000001 0.00013071 4561600.0 2157.0 1712.6 1846.6 1875.3 2278.2 2363.4 2629.5 2367.2 2345.1 2817.7 2308.1 True False 2375.977052100525 1856.9268123702232 1971.9213805078705 1991.133021884689 2118.187091363333 2344.1532539827726 2729.567061417612 2319.984338967526 2246.543602304925 2639.78994112831 2024.218332251397 1.1737750885092968 0.9173550020688197 0.974164372039176 0.9836552659169382 1.0464222448807787 1.1580535640024237 1.3484548667147505 1.1461136884316077 1.1098326531833407 1.3041033662570656 1.0 10.983149192218272 -7.002729430760554 7.875154446739143 1.0926943193432235 1.0040802792019772 0.13668181307688576 0.12200994466452732 0.22056421687565786 116.95697020249979 0.017260435848282994 0.03160748154769791 9.937349611305809e-08 7.002729430760554 -0.0886140401412463 AKEVELVS(ph)E ddPTM_A549_MK2206_60min_R1 2 AKEVELVSE 9 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AKEVELVS(1)E;AKEVELVS(1)E 96.113 0.00074803 242760000.0 5479.9 6401.299999999999 5256.6 4827.0 6589.4 5757.4 5277.6 6013.0 8376.7 8125.4 9280.599999999999 True False 6404.773149308056 6727.098827837052 6002.064922901817 6009.615216692263 5620.107988925395 6366.644246547187 6236.471605639083 6865.361164040195 6479.390824841168 6289.866496664616 6975.970888470293 0.9181192484466503 0.9643243837148789 0.8603913374727348 0.8614736662139462 0.8056381081254462 0.9126534998977439 0.8939933530896128 0.9841441820502848 0.9288156341865101 0.9016474691802895 1.0 12.768178304256976 -8.20210698090635 5.639634074678154 0.9667638334788871 0.8862132660911558 0.3106771733491215 0.04545275361124965 0.16795011102233812 11.342376012656446 0.007517979765248613 0.00970315146905948 6.27903666593247e-09 8.20210698090635 -0.08055056738773125 AKEVELVS(ph)E ddPTM_A549_PD325901_60min_R1 4 AKEVELVSE 9 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E 92.866 0.00082467 453365000.0 16519.600000000002 14999.9 18264.5 15772.900000000001 19754.2 15998.099999999999 15998.400000000001 15602.2 17125.100000000002 18540.600000000002 20178.9 True False 18196.657630913236 16263.994215153632 19504.038803360785 16747.156210145047 18366.733140290373 15867.816777753142 16607.2278666604 15291.00188131088 16405.39160113942 17369.943351841404 17697.023224586326 1.0282326807161992 0.919024290625228 1.1021084481747183 0.9463261700916097 1.0378430828283949 0.8966376195804567 0.9384192841871912 0.864043725730507 0.9270141872418152 0.9815178028194871 1.0 14.111219087863512 -7.24862511310174 24.88838241232579 0.9497087546229008 1.0037812710149567 0.26045628021200284 0.05740582233118272 1056.999855028771 2052946.8672270086 0.008692592117727238 0.014994907215840866 5.641244029659256e-08 7.24862511310174 0.0540725163920559 AKFEELNMDLFR ddPTM_A549_MK2206_60min_R1 1 AKFEELNMDLFR 12 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 45.915 0.044152 1097900.0 452.29 642.54 561.84 511.42 942.8 563.44 552.03 542.35 1009.3 806.34 612.85 False True 528.6254945711672 675.242541489763 641.5173603247644 636.7179229585162 804.1153689196075 623.0628468187975 652.3267054079399 619.2297733772155 780.6951615209073 624.1872339725485 460.66243120046335 1.1475333319315741 1.4658077059379784 1.392597522339736 1.3821789662752852 1.7455631596093542 1.3525367050122294 1.416062307725006 1.3442159191569703 1.6947228787171869 1.3549775099869716 1.0 8.847566135164545 -11.006985340619115 1.284485280665485 0.9996514518014988 1.4662145841782133 0.12606867143759848 0.1872632593526489 0.2881438222779935 0.8453562221654476 0.1169546417431644 0.026492219466187586 9.840443210969298e-12 11.006985340619115 0.46656313237671443 AKFEELNMDLFR ddPTM_A549_PD325901_60min_R1 2 AKFEELNMDLFR 12 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 114.56 3.4273e-12 2507900.0 1097.3 1320.5 1469.0 1486.5 1738.1 1377.4 1525.1 1346.9 1760.7 1512.2 1443.2 False True 1208.6970882104347 1431.7831692951538 1568.6951738146129 1578.3177289135547 1616.0218521194834 1366.1829110755154 1583.1385150667413 1320.0350228773912 1686.7039019991812 1416.7194339263342 1265.6955491985682 0.9549666892451154 1.1312224098455204 1.2393937663823678 1.2469963490927476 1.2767856007258143 1.07939299615976 1.2508051530000057 1.042932499615117 1.3326300333972045 1.1193208626066462 1.0 10.305714704844293 -5.292015585794039 3.675571296397746 1.1718575140860734 0.9377815536067372 0.28500019061219284 0.10044413607426456 0.306737921909818 7.562621026488917 0.017353156366811985 0.18526252730160614 5.10486679496223e-06 5.292015585794039 -0.2340759604793362 AKGKS(ph)DS(ph)EDGEKENEK ddPTM_A549_PD325901_60min_R1 1 AKGKSDSEDGEKENEK 16 3 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 2 AKGKS(1)DS(1)EDGEKENEK 53.033 0.005516399999999999 18724000.0 2618.0 2404.6 2385.6 1763.3 2799.1 2354.0 2319.6 2080.0 2413.0 2303.4 2904.5 True False 2883.7774327302636 2607.244080944435 2547.501161778174 1872.2150362551429 2602.5008723707774 2334.8298044662133 2407.873647333824 2038.512768271566 2311.590001433535 2157.962930899297 2547.264913142491 1.1321073901075434 1.0235464978504922 1.0000927460015894 0.7349903131769057 1.0216844188224394 0.9166026636726204 0.9452780646844055 0.8002751334397759 0.9074792297836779 0.847168631643058 1.0 11.314733290996852 -5.550989777631613 2.0984086824925647 0.9328360153157856 1.1318370473869956 0.3762223457224525 0.08571470001907527 0.35480278902597523 2.5342895003493324 0.011665934672412536 0.1059431901661795 2.8119670173427002e-06 5.550989777631613 0.19900103207121 AKGPS(ph)ESSK ddPTM_A549_MK2206_60min_R1 2 AKGPSESSK 9 1 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 AKGPS(0.998)ES(0.002)SK;AKGPS(0.936)ES(0.051)S(0.013)K 63.091 0.0019195 18613500.0 5017.8 6155.4 4675.1 5728.3 4708.1 4719.8 4640.7 5769.200000000001 7704.6 19015.0 18868.5 True False 5864.68196656836 6468.683568160871 5338.099478951848 7131.733757153158 4015.544726782357 5219.246103250324 5483.855119806218 6587.001767434006 5959.520401718008 14719.498293508957 14182.930705892042 0.4135028287300299 0.4560893444592219 0.3763749248760153 0.5028392160296185 0.2831251742007152 0.3679948955177566 0.38665176002926177 0.46443163997815734 0.42018962972456975 1.0378319261895574 1.0 13.791868055849447 -10.62117329576597 0.607179522184923 1.0695303721201042 0.3955251063236939 0.942891434420643 0.05786449700233949 0.1766738923788216 0.09853336851666553 0.06416534368287846 0.01203098486449056 2.392360946324393e-11 10.62117329576597 -0.6740052657964102 AKGPS(ph)ESSK ddPTM_A549_PD325901_60min_R1 5 AKGPSESSK 9 1 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 AKGPS(0.999)ES(0.001)SK;AKGPS(0.986)ES(0.006)S(0.008)K;AKGPS(0.982)ES(0.015)S(0.003)K;AKGPS(0.982)ES(0.016)S(0.002)K;AKGPS(0.995)ES(0.002)S(0.002)K 75.479 0.00057703 49915600.0 22355.699999999997 26707.0 17971.699999999997 22425.300000000003 22275.9 14897.0 11966.9 14018.599999999999 23684.200000000004 25398.199999999997 26145.3 True False 24625.234206603476 28957.692618224668 19191.36763461135 23810.459849448485 20711.317631683094 14775.683771084608 12422.306928038946 13738.988025621053 22688.835438024096 23794.553317516067 22929.59384871211 1.0739498644886205 1.262896011559801 0.8369693663670922 1.0384161187742038 0.9032570645749309 0.6443936106576313 0.5417586988239075 0.5991814820737758 0.9895001013852874 1.0377224068821673 1.0 14.484923180275468 -5.765078523859393 24.997100332712574 0.9038322915429591 1.1684229614624093 0.2765866807317706 0.1824494448559963 103.5892852292465 711575.0895805197 0.028733704852158173 0.09467959543037463 1.7175978038833402e-06 5.765078523859393 0.26459066991945024 AKGPS(ph)ESSKER ddPTM_A549_MK2206_60min_R1 2 AKGPSESSKER 11 2 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 AKGPS(0.999)ESS(0.001)KER;AKGPS(0.999)ESSKER 65.805 0.0018004999999999998 71186000.0 871.8800000000001 1729.75 2019.79 2150.6099999999997 2609.22 2240.34 1892.7 2349.7 3466.5 7505.299999999999 7665.299999999999 True False 1019.0320285805774 1817.7868866403915 2306.2265933546128 2677.509546544553 2225.407194412834 2477.411291782665 2236.5790904943724 2682.7771706544563 2681.343284863002 5809.84751734277 5761.794458482354 0.17686018408386414 0.31548971414006205 0.4002618645931477 0.46470063551170204 0.386235088816237 0.4299721744040156 0.3881740500482003 0.46561486876800096 0.46536600779217363 1.0083399467312955 1.0 12.492302480561243 -12.73554397736059 0.2234054215465746 2.072783146316803 0.28728222796027236 0.9404846508872691 0.0611356093077347 2.9392374864498416 0.08747400586860511 1.548202626343344 0.04984412470228114 1.8384677782217518e-13 12.73554397736059 -1.7855009183565307 AKGPS(ph)ESSKER ddPTM_A549_PD325901_60min_R1 3 AKGPSESSKER 11 2 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 AKGPS(0.996)ES(0.003)S(0.001)KER;AKGPS(0.97)ES(0.013)S(0.017)KER;AKGPS(0.978)ES(0.022)SKER 91.20700000000001 6.0976e-05 325217000.0 14495.0 15522.3 16350.6 17175.300000000003 18773.3 20512.0 16293.6 18485.3 17458.800000000003 19630.6 22328.5 True False 15966.52172934498 16830.418696516597 17460.250040145125 18236.17927306356 17454.728172369087 20344.957072731933 16913.66186420004 18116.596190062693 16725.067350612444 18391.120565820842 19582.236052023447 0.8153574334885595 0.8594737930746932 0.8916371957604374 0.9312613342325226 0.8913552122442869 1.03894963877885 0.8637247462070267 0.9251546218691757 0.8540938484338325 0.9391736733722231 1.0 14.257257892038394 AKGPS(ph)PPGAK ddPTM_A549_MK2206_60min_R1 4 AKGPSPPGAK 10 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 AKGPS(1)PPGAK;AKGPS(1)PPGAK;AKGPS(1)PPGAK;AKGPS(1)PPGAK 57.136 0.0038465000000000005 164111000.0 21987.8 23430.600000000002 21368.2 18561.5 27461.3 22117.7 19270.4 20294.399999999998 30848.0 32282.9 32361.199999999997 True False 25698.803089902296 24623.11745981579 24398.53207121535 23109.068333257394 23421.779147764122 24458.180333458968 22771.582239902116 23171.193348993387 23860.97725413351 24990.170468552216 24325.02091631628 1.0564760942369646 1.0122547291747468 1.0030220387128121 0.9500122697841845 0.9628677906728418 1.0054741748260274 0.936138238821732 0.9525662250695559 0.9809231957588367 1.0273442540717315 1.0 14.570153425084214 -5.431351296098711 1.6827609234525136 0.9811722401931998 1.0674757478989303 0.4446553849079189 0.026142563530466793 0.47026944345184785 1.6487169303753009 0.0034742103340531898 0.05851064876429388 3.703810034006782e-06 5.431351296098711 0.08630350770573048 AKGPS(ph)PPGAK ddPTM_A549_PD325901_60min_R1 3 AKGPSPPGAK 10 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 AKGPS(1)PPGAK;AKGPS(1)PPGAK;AKGPS(1)PPGAK 80.96 0.00032124 278503700.0 22004.1 21964.300000000003 22747.0 22105.4 25966.8 25850.0 24105.9 26432.4 25183.4 24839.2 25895.6 True False 24237.94003343774 23815.308644717563 24290.748208823003 23470.800352994094 24142.981548596865 25639.486170540185 25023.26321575463 25905.18504618334 24125.02927563253 23270.848672915596 22710.60536573339 1.067252045601957 1.048642617015 1.0695773105843225 1.0334731274230018 1.0630708058986704 1.1289653339327537 1.101831625039404 1.1406646643277087 1.0622803261789435 1.0246687967211794 1.0 14.471078542067232 -10.014611054596308 1.0038224751049203 1.0076007978419055 1.0793713727763847 0.39454208585229344 0.031706811274852406 0.33644979236796574 0.6844869829752526 0.01258696293614005 0.006603531799702639 9.669164422610083e-11 10.014611054596308 0.07177057493447925 AKGPSES(ph)SKER ddPTM_A549_PD325901_60min_R1 2 AKGPSESSKER 11 2 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 AKGPSES(0.5)S(0.5)KER;AKGPSES(0.5)S(0.5)KER 69.602 0.00071498 120093000.0 5768.1 6232.4 6205.6 5906.0 6021.7 6342.6 4918.2 5602.6 6222.9 6005.5 6538.0 True False 6353.673265749207 6757.626220609699 6626.74933330426 6270.800206500814 5598.756565737236 6290.947968482332 5105.364792342309 5490.851747845326 5961.373153717677 5626.311705094958 5733.867447796732 1.1080955957903487 1.1785459434027117 1.155720705725526 1.0936423388912488 0.9764363436564245 1.0971561560774588 0.8903876552472574 0.9576174890396557 1.0396775314379416 0.9812420249193058 1.0 12.485292838243542 -6.560843660787219 3.608815071714008 1.0082084318916982 1.1488408752546757 0.6318061708360281 0.05222891907070724 0.11965974098973392 3.2748887659617965 0.007406100293225602 0.01673413927486843 2.7488835300371075e-07 6.560843660787219 0.14063244336297753 AKGSET(ph)PGAT(ph)PGSK ddPTM_A549_PD325901_60min_R1 2 AKGSETPGATPGSK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 AKGS(0.081)ET(0.919)PGAT(0.968)PGS(0.032)K;AKGS(0.07)ET(0.931)PGAT(0.957)PGS(0.043)K 86.539 2.6543000000000003e-05 72307000.0 11447.3 10693.8 10637.8 12052.3 13093.0 12527.7 11478.1 13313.7 12445.7 13102.4 15065.5 True False 12609.421468943132 11595.00405589436 11359.745078288004 12796.74319824072 12173.392848397905 12425.678564745696 11914.905376557323 13048.147809104403 11922.650510087587 12275.112227930422 13212.53900807306 0.9543526389014697 0.8775757671413222 0.8597700314335518 0.9685302113713131 0.9213515162346753 0.9404459322431079 0.901787716144273 0.9875579403119861 0.9023739118425814 0.9290502166487564 1.0 13.68962011050806 -11.022694034225315 0.728702321762806 1.014219912154178 0.920976149079292 0.015978543662068412 0.041979841640677626 0.8853349497253192 0.6141512726587888 0.05430678795846012 0.00675096218789031 9.490868711322151e-12 11.022694034225315 -0.09324376307488591 AKGSET(ph)PGATPGSK ddPTM_A549_MK2206_60min_R1 2 AKGSETPGATPGSK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 AKGS(0.058)ET(0.942)PGATPGSK;AKGS(0.074)ET(0.924)PGAT(0.001)PGSK 109.5 5.177000000000001e-06 136583000.0 11869.5 12853.8 12955.0 11545.400000000001 14705.7 11488.599999999999 10749.4 9588.7 17059.0 20465.5 19758.8 True False 13872.781418586457 13508.00351698121 14792.213802875056 14374.023518292703 12542.511010522996 12704.316026484528 12702.42683751266 10947.927589162176 13195.163737625253 15842.329336092955 14852.14464486206 0.9340591376064733 0.9094985162061534 0.9959648358253946 0.967807940334411 0.8444915741419164 0.8553859614395453 0.8552587616972157 0.7371277247121003 0.8884349064153491 1.0666694753456658 1.0 13.858383650313199 -4.230468446041931 16.545212273546422 0.9184727480313587 0.9063040998354033 0.0 0.0877024277987435 0.0 0.0 0.011419555967558538 0.0 5.882088493006342e-05 4.230468446041931 -0.012168648195955423 AKGSET(ph)PGATPGSK ddPTM_A549_PD325901_60min_R1 2 AKGSETPGATPGSK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 AKGS(0.138)ET(0.861)PGAT(0.001)PGSK;AKGS(0.073)ET(0.926)PGAT(0.001)PGSK 117.84 1.2497e-06 167975000.0 16317.6 16021.1 15470.7 16087.400000000001 19866.4 18366.9 18331.7 17714.5 18143.7 18757.1 18367.9 True False 17974.150739617773 17371.25432305533 16520.634734876607 17081.08216086373 18471.052599359362 18217.326055926293 19029.32287499114 17361.170400743595 17381.183385416356 17572.773504893295 16108.764743711468 1.1157994436931928 1.0783728361193377 1.0255680679256256 1.060359526793129 1.1466461204959917 1.1308952825223897 1.1813024262099177 1.0777468463260684 1.0789892125156035 1.0908827451684864 1.0 13.97555824873685 -10.0308532131878 0.7737308308300925 1.005302826466881 1.1007904144795717 0.07788779810733182 0.047942797958326004 0.4486802847959833 0.5390600293715998 0.021499205951089437 0.00929847280993093 9.314226329938309e-11 10.0308532131878 0.09548758801269064 AKHDELTYF ddPTM_A549_MK2206_60min_R1 2 AKHDELTYF 9 1 P04080;A0A1W2PQG6 P04080 CSTB Cystatin-B 0 ; 62.262 0.007337399999999999 4274900.0 1350.8400000000001 1574.0900000000001 1219.23 1156.8400000000001 1887.93 1481.1100000000001 1289.71 1297.29 1980.1799999999998 1800.51 2209.2 False True 1578.828767132849 1654.2044575180075 1392.13514742411 1440.2658519325216 1610.2179979257476 1637.8400771187512 1524.0336127233568 1481.1848302840006 1531.6723916976825 1393.773540491497 1660.5946691817956 0.950761071580921 0.9961518534399869 0.838335310392174 0.8673193276250647 0.9696634752652377 0.9862973231907002 0.9177637631910954 0.8919604872715908 0.9223637893841756 0.8393219407227376 1.0 10.697484256744445 -10.614382010430688 0.8506578658802082 1.0010272930472142 0.9262842620217618 0.0 0.06621352532112978 0.7366599469197461 0.9332319280875845 0.03469425168665221 0.008990598818643215 2.4300655550432575e-11 10.614382010430688 -0.07474303102545232 AKHDELTYF ddPTM_A549_PD325901_60min_R1 1 AKHDELTYF 9 1 P04080;A0A1W2PQG6 P04080 CSTB Cystatin-B 0 62.262 0.007337399999999999 4355400.0 977.31 695.97 720.32 957.86 914.8 949.7 950.88 764.58 1122.1 1173.4 959.88 False True 1076.5257917424033 754.6218344069271 769.2052468360389 1017.0248367421041 850.5476038886734 941.9659580720315 987.0662587415019 749.3298520985937 1074.9420392078614 1099.3113237463035 841.8208451806553 1.2788062898482635 0.8964161896525439 0.9137398429127364 1.2081250334491893 1.010366527222482 1.1189625007086692 1.1725372024135097 0.890129837468906 1.276924948297257 1.305873250870131 1.0 9.717369423932688 -6.26441787210686 24.995561048864996 1.1138751492740278 1.0163303198082525 0.06808087104943994 0.14873407202253588 534.3614243358941 4484399.517164734 0.020415214391187743 0.049340738670087 5.439789919371546e-07 6.26441787210686 -0.09754482946577525 AKHHAISAK ddPTM_A549_MK2206_60min_R1 1 AKHHAISAK 9 1 P27824;P27824-2;P27824-3;D6RFL1;H0Y9Q7;H0Y9H1;D6RGY2;D6RAU8;D6RB85;D6RDP7 P27824 CANX Calnexin 0 66.435 0.019142 3023300.0 750.47 906.32 508.63 481.67 1057.3 858.44 889.17 573.0 1192.4 1191.6 939.89 False True 877.1309887700899 952.4478167942881 580.7613822119905 599.6791716229882 901.772570596841 949.2795510136466 1050.7206793970938 654.2245047389043 922.3233038715257 922.4167323978583 706.4893733556396 1.241534581905949 1.3481417452472217 0.822038383186892 0.8488155579392074 1.276413495525994 1.343657225167899 1.4872420152711507 0.9260217200883138 1.305502019783725 1.305634263140605 1.0 9.464524050231434 AKHHAISAK ddPTM_A549_PD325901_60min_R1 1 AKHHAISAK 9 1 P27824;P27824-2;P27824-3;D6RFL1;H0Y9Q7;H0Y9H1;D6RGY2;D6RAU8;D6RB85;D6RDP7 P27824 CANX Calnexin 0 60.563 0.028623000000000003 3076500.0 589.72 871.83 418.5 488.7 958.31 779.55 785.27 883.05 667.21 938.73 705.58 False True 649.5879402710809 945.3021737876513 446.90192664493867 518.8858890817725 891.0016115900244 773.2016032589783 815.1538795662318 865.4368750106761 639.1694839852755 879.4584275953356 618.7981330401371 1.0497574339464704 1.5276422524796727 0.722209558793144 0.8385382265659097 1.4398905943890934 1.249521551495738 1.3173179362410237 1.3985770622138274 1.0329208345297594 1.4212363946131867 1.0 9.273325033850298 -8.962304984364375 24.88089982300042 1.0145237222802668 1.1924057627380322 0.0 0.26410836283576966 263.1832857816206 173717.23027618628 0.04085202822858801 0.04339033578240669 1.0906741388609148e-09 8.962304984364375 0.17788204045776546 AKKAEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_A549_MK2206_60min_R1 3 AKKAEQGSEEEGEGEEEEEEGGESK 25 2 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 AKKAEQGS(1)EEEGEGEEEEEEGGESK;AKKAEQGS(1)EEEGEGEEEEEEGGESK;AKKAEQGS(1)EEEGEGEEEEEEGGESK 209.39 3.6714e-81 49856200.0 2984.9300000000003 3906.63 4163.33 3274.37 4620.95 3049.5099999999998 3267.89 2756.61 5501.9 5450.349999999999 6596.1 True False 3488.7132094680755 4105.46078043414 4753.752797524026 4076.5907969920545 3941.2143763354497 3372.2071240990904 3861.6233127466844 3147.3679092640673 4255.728434728905 4219.112149567526 4958.106326901162 0.7036382399746833 0.828029999711618 0.9587839558283823 0.8222072154592016 0.7949031578753427 0.680140138544938 0.7788504437258036 0.6347923383948859 0.8583374688111527 0.8509523336915789 1.0 12.275573495104108 -9.690843618502182 1.0954307876719773 0.9737712642224959 0.7846142867106654 0.2301284961116048 0.09270562336168174 0.294110255578552 0.7260700968430552 0.026406212888404054 0.017709168819462797 2.0377757113677358e-10 9.690843618502182 -0.18915697751183058 AKKAEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_A549_PD325901_60min_R1 1 AKKAEQGSEEEGEGEEEEEEGGESK 25 2 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 AKKAEQGS(1)EEEGEGEEEEEEGGESK 300.5 1.6880999999999995e-171 49011000.0 1879.2 1336.5 2362.7 2263.3 1586.4 4178.5 3745.2 3060.9 2358.1 2534.2 2342.8 True False 2069.9750006060785 1449.1315454471583 2523.0470300692887 2403.0989006727555 1474.976736782894 4144.4716813772575 3887.7256354520755 2999.847948270403 2258.997257513643 2374.190179510723 2054.650452232819 1.0074584698125202 0.7052934691992818 1.2279689848594226 1.1695901354224376 0.7178723442617769 2.017117644937317 1.8921591413406724 1.4600283688208004 1.0994557517356576 1.155520237970724 1.0 11.004677260698429 AKKKEEPSQNDIS(ph)PK ddPTM_A549_PD325901_60min_R1 3 AKKKEEPSQNDISPK 15 3 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 AKKKEEPSQNDIS(1)PK;AKKKEEPSQNDIS(1)PK;AKKKEEPSQNDIS(1)PK 70.335 0.00033360000000000003 12096400.0 2482.78 2233.48 2331.61 3168.7 2726.7 4301.5 3374.08 3765.93 3331.4 2391.72 2605.59 True False 2734.8299978739656 2421.7031979987414 2489.8470757099303 3364.4234023601643 2535.185998604335 4266.470010157779 3502.4824607674227 3690.815571835065 3191.392843255566 2240.7063910265106 2285.1189481958813 1.19679984275354 1.0597711772994112 1.089591890906022 1.4723187189080034 1.1094328374485203 1.8670669260023376 1.5327352930720124 1.6151524955622076 1.3965981271019587 0.9805644440503043 1.0 11.158053549072743 -6.225167377034486 23.735814072642487 1.3045227475827323 1.1098258592963302 0.12530968207542892 0.26074781989867146 691.787632677795 452692.25816967164 0.040560815595204 0.10730847472120002 5.954326196516728e-07 6.225167377034486 -0.1946968882864022 AKKPAAAT(ph)VTK ddPTM_A549_MK2206_60min_R1 1 AKKPAAATVTK 11 2 P16403 P16403 HIST1H1C Histone H1.2 1 AKKPAAAT(0.984)VT(0.016)K 41.092 0.032079 1983000.0 1414.4 1711.6 1747.2 2057.9 2135.8 1489.3 1305.1 1602.6 2321.3 2333.2 2134.3 True False 1653.1161412400443 1798.71312916531 1994.979232449502 2562.085592382642 1821.6266492771522 1646.8967374826707 1542.2197765119688 1829.7734577566619 1795.529256354387 1806.1284995222238 1604.2944063166333 1.0304319049740396 1.1211864369053375 1.243524395893057 1.5970170950511768 1.1354690523789215 1.0265551827633994 0.9613072079786252 1.1405471779694822 1.1192018430562367 1.1258086373741025 1.0 10.647723201740735 -6.992989187844828 24.998851129233856 1.0558947968940626 1.2546047589981035 0.27771538046942423 0.13961521978125327 171.61666198199694 611937.391432461 0.02051687269097787 0.03871369479680954 1.0162739936189102e-07 6.992989187844828 0.1987099621040409 AKKPAAAT(ph)VTK ddPTM_A549_PD325901_60min_R1 1 AKKPAAATVTK 11 2 P16403 P16403 HIST1H1C Histone H1.2 1 AKKPAAAT(0.996)VT(0.004)K 49.31 0.009889499999999999 2206100.0 1662.4 1973.4 1359.1 1403.5 1986.6 1425.6 1348.5 2094.8 1881.3 2201.1 1903.3 True False 1831.1656242058027 2139.7053436479014 1451.3366989322258 1490.1910074202326 1847.0680693979427 1413.990386256173 1399.8179054275145 2053.0175706611917 1802.2355033969798 2062.1221703579236 1669.206166012774 1.0970278336437618 1.2818700213401482 0.869477197294944 0.8927543150525533 1.106554784547691 0.8471035004823677 0.8386129490350817 1.2299364886515045 1.0796961694084635 1.2353909375279306 1.0 10.704946439671277 -5.7514339065246505 24.999789181661754 1.0117135099553658 1.1894489051894528 0.19143278440491796 0.1413997252665068 224.87200860719486 561855.8685405605 0.0169277344204325 0.06402831691342226 1.7724177615166009e-06 5.7514339065246505 0.177735395234087 AKLEQLFQDEVAK ddPTM_A549_MK2206_60min_R1 1 AKLEQLFQDEVAK 13 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 113.72 2.1334e-05 1575500.0 1225.0 1158.8 1349.4 1155.1 1455.0 1361.3 1026.7 1402.3 1769.5 1685.3 1800.6 False True 1431.7500516254615 1217.777970365016 1540.765210775731 1438.0995518544084 1240.9714274268454 1505.3518624421934 1213.2381001799388 1601.0803193636395 1368.7110753108561 1304.5895595083168 1353.461325968106 1.0578433414795632 0.8997508440028472 1.1383887970893074 1.0625346467330807 0.9168872457727607 1.1122237728997857 0.896396577354829 1.1829523966770283 1.011267222084711 0.9638912723089209 1.0 10.402437948992826 -8.979353682331016 24.975448653905108 1.0049707627165017 1.031916667836742 0.03408532833924882 0.09194093495630204 557.5165751388336 674425.4164247036 0.014730194660244722 0.01505220144256222 1.0486880463894452e-09 8.979353682331016 0.02694590512024031 AKLEQLFQDEVAK ddPTM_A549_PD325901_60min_R1 1 AKLEQLFQDEVAK 13 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 114.43 2.0208e-05 3590300.0 1650.0 1411.6 1420.8 1463.3 2144.7 1911.8 1623.6 2209.7 1922.0 1783.6 1913.6 False True 1817.5067853341989 1530.5604860106307 1517.2240319644661 1553.6847176045776 1994.0636708133343 1896.23093465527 1685.38698646801 2165.625800023885 1841.225023935041 1670.9831916089197 1678.239331309854 1.0829842629868813 0.9120037037959533 0.9040570100214989 0.9257825678486141 1.188187902411381 1.129893036874112 1.0042590201676285 1.290415353532222 1.0971170735809046 0.9956763379539729 1.0 10.712732755787018 -6.7323247815630385 24.997697693109266 1.077133497369627 0.9493244611088753 0.3276576977466078 0.0957087738088715 220.15153325769228 189020.2491875333 0.014014617209456298 0.029170054221423294 1.8521460017165553e-07 6.7323247815630385 -0.12780903626075168 AKLNIT(ph)PTK ddPTM_A549_PD325901_60min_R1 1 AKLNITPTK 9 1 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 AKLNIT(0.842)PT(0.158)K 45.915 0.016665 3236600.0 2754.5 2918.2 3242.9 3626.8 3884.9 3947.5 3740.8 4284.3 3551.8 3726.7 4073.5 True False 3034.134812244274 3164.12695542379 3462.982695141868 3850.819198939579 3612.038026177423 3915.352868789453 3883.1581910443047 4198.84627553167 3402.530197717211 3491.3955259974005 3572.485324044048 0.8493064455222556 0.8856934790265292 0.969348333451452 1.077910431995969 1.011071480648828 1.0959745145593152 1.0869626713115719 1.1753291881346575 0.9524266411444771 0.9773015728011853 1.0 11.802712369328914 -5.800186221599728 2.909110569787124 1.0154792021519465 0.8581090628705057 0.4902872278830316 0.06550383833425852 0.21026096567463956 3.5271665022358722 0.010655760393346519 0.04583796242589131 1.5842137500780097e-06 5.800186221599728 -0.15737013928144084 AKLNITPT(ph)K ddPTM_A549_PD325901_60min_R1 1 AKLNITPTK 9 1 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 AKLNIT(0.347)PT(0.653)K 47.823 0.013309 3119500.0 2615.8 2307.2 2987.5 3216.4 3133.6 2844.3 2868.4 3334.4 3322.5 3151.9 3486.4 True False 2881.3540903498183 2501.635841119105 3190.249715296905 3415.0697230256014 2913.506746333129 2821.1369638246592 2977.5585316487086 3267.8927762138032 3182.8668793049837 2952.88849609338 3057.594902110509 0.9423596593390968 0.8181711185456083 1.0433853461407954 1.116913728718067 0.9528753283576176 0.922665380517663 0.9738237493768206 1.0687788542419847 1.0409707568219733 0.9657553046203553 1.0 11.578181562704819 -8.09605282515312 9.486861884093114 1.023558217010444 0.967391232051749 0.10202398741978769 0.07353493006254269 0.7112875434730628 65.88292899623858 0.012052632555011242 0.015570507604903002 8.015805576794874e-09 8.09605282515312 -0.05616698495869499 AKMPIVGLGT(ph)WKSPLGK ddPTM_A549_MK2206_60min_R1 1 AKMPIVGLGTWKSPLGK 17 2 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 AKMPIVGLGT(0.558)WKS(0.442)PLGK 58.997 0.0018093 1839200.0 586.5 671.01 360.47 374.11 997.14 620.49 393.51 624.91 1274.6 1068.6 1172.1 True False 685.486861451701 705.161542884561 411.59006634676706 465.7669667944361 850.4620269033707 686.1498399520723 465.0056733240558 713.4929062066117 985.9051351179518 827.202517825068 881.0352216856705 0.7780470571201115 0.8003783793517207 0.467166415389476 0.5286587361437056 0.9652985555744245 0.7787995565481172 0.527794646432373 0.8098347133517513 1.1190303302876305 0.93889835214805 1.0 9.783055885578213 -8.616309444048547 4.628250464847395 1.0554855389371058 0.6936124665827127 0.491118584460987 0.14384265820993808 0.11389784041804206 4.318008762962805 0.02472967349790519 0.028089804638623303 2.419304626501513e-09 8.616309444048547 -0.36187307235439314 AKMPIVGLGT(ph)WKSPLGK ddPTM_A549_PD325901_60min_R1 2 AKMPIVGLGTWKSPLGK 17 2 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 AKMPIVGLGT(0.673)WKS(0.327)PLGK;AKMPIVGLGT(0.557)WKS(0.443)PLGK 88.56 2.4661e-06 6928600.0 2558.08 2376.25 2433.3900000000003 2967.3 2346.69 4104.7 2873.3 2771.24 3926.3 2927.8 3869.8 True False 2817.7743984410354 2576.504926950099 2598.534478562791 3150.583381772751 2181.866590041005 4071.2726841089498 2982.645003830089 2715.965444204275 3761.2912650760445 2742.938208338525 3393.8391326833553 0.8302616265176801 0.7591711999952612 0.7656622417775727 0.9283243131449567 0.6428903977885073 1.1996068537550213 0.8788410078446607 0.8002634591748855 1.1082703445941355 0.8082110262456098 1.0 11.72870246769817 -7.448494343328382 0.6475570341187016 1.0429582302266163 0.774349787658891 0.05073410630593422 0.1522802538182604 0.5992864104401511 0.49405539063622267 0.0279161888770873 0.0696340086830867 3.560456274885691e-08 7.448494343328382 -0.2686084425677253 AKMPIVGLGTWKS(ph)PLGK ddPTM_A549_PD325901_60min_R1 1 AKMPIVGLGTWKSPLGK 17 2 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 AKMPIVGLGT(0.346)WKS(0.654)PLGK 45.885 0.012729 5311900.0 2498.5 2032.4 2003.0 2623.9 2143.3 2694.3 1996.6 2226.9 3233.2 2493.7 3299.9 True False 2752.1458807015124 2203.6774807084194 2138.935625017473 2785.972343690734 1992.762001983597 2672.3585140923165 2072.581705581443 2182.4827325307456 3097.3198477558685 2336.2473564224956 2894.0332197896055 0.950972456667789 0.7614554890522733 0.7390846830614378 0.9626608031449178 0.6885760634525369 0.9234028468707748 0.7161568469252466 0.7541318868099969 1.0702433636822737 0.8072634897371148 1.0 11.498865766915504 -8.764263152170821 24.999974385433728 1.033170488113748 0.8093553253959336 0.17625921067165562 0.11426806045424033 36.75042546669599 325365.14717042673 0.014708541281832967 0.015998191461109146 1.7208255587322967e-09 8.764263152170821 -0.22381516271781443 AKMTPT(ph)K ddPTM_A549_PD325901_60min_R1 1 AKMTPTK 7 1 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 AKMT(0.144)PT(0.856)K 45.312 0.028574000000000002 5547800.0 4624.0 4574.3 4342.3 4451.0 4828.9 4480.4 4331.0 4631.6 4800.3 5865.3 6007.9 True False 5093.425075991112 4959.792314507247 4636.99459037113 4725.9281610455655 4489.7347228006265 4443.913107871884 4495.818575014136 4539.219104580088 4598.560084492913 5494.963957021643 5268.966387215962 0.9666839189464629 0.941321684370798 0.8800577285180299 0.896936479327717 0.8521091980571414 0.84341268880631 0.8532638556818836 0.8615008658232378 0.872763222716765 1.0428922018470297 1.0 12.363304260890555 -10.645022896373412 0.9033746237033368 1.0004239859143842 0.8833917302064135 0.6239181269788767 0.03955571960076087 0.3617805227852823 0.5231236849894487 0.02758672821222377 0.007299854534334189 2.2645249167717346e-11 10.645022896373412 -0.11703225570797071 AKNENS(ph)PDTQR ddPTM_A549_MK2206_60min_R1 1 AKNENSPDTQR 11 1 Q9HCS5 Q9HCS5 EPB41L4A Band 4.1-like protein 4A 1 AKNENS(0.874)PDT(0.126)QR 40.025 0.029157 19088000.0 653.98 858.21 656.08 451.95 516.64 284.47 247.52 205.84 507.01 857.12 1078.4 True False 764.3558357240976 901.8892232887129 749.1220094010238 562.6777702888063 440.6429403888698 314.57242658409683 292.4911800492245 235.01845035856192 392.17304452859963 663.4959967043069 810.6035176741126 0.9429466059033216 1.11261449478597 0.9241534154089296 0.6941467166381333 0.5435986037332023 0.388071874504947 0.3608313727634413 0.2899302127788773 0.48380377826865684 0.8185209936025131 1.0 9.662852625855242 -4.105358688051134 12.154535585373162 0.702808692279375 0.9155279165464986 0.0 0.2757098169328023 0.0 0.0 0.04264841935313157 0.0 7.845873685773516e-05 4.105358688051134 0.21271922426712353 AKNENS(ph)PDTQR ddPTM_A549_PD325901_60min_R1 4 AKNENSPDTQR 11 1 Q9HCS5 Q9HCS5 EPB41L4A Band 4.1-like protein 4A 1 AKNENS(0.996)PDT(0.004)QR;AKNENS(0.766)PDT(0.234)QR;AKNENS(0.879)PDT(0.121)QR;AKNENS(0.991)PDT(0.009)QR 126.71 2.3878e-07 92172700.0 7775.8 7306.570000000001 6290.829999999999 6431.93 7188.22 5804.73 5119.13 6431.05 6768.19 7782.71 8763.67 True False 8565.193491758582 7922.320296309644 6717.763553633881 6829.21570812712 6683.344225212771 5757.458203432101 5313.9412934454185 6302.777662688876 6483.746511314733 7291.308362394404 7685.794147481308 1.1144188001139037 1.0307744579531637 0.8740493727424826 0.888550431755332 0.8695710679947045 0.7491038782659646 0.6913978167352864 0.8200554870122749 0.84360137506929 0.9486733865730479 1.0 12.907978621148029 -5.619025825960616 2.987045437710421 0.8810251081480427 1.1055905935642325 0.48861933780338795 0.08422468984490661 0.22539266803299496 3.788072936642918 0.014779995623544246 0.08130232007308827 2.4042198252851282e-06 5.619025825960616 0.22456548541618981 AKNEQEHHAGGDS(ph)QK ddPTM_A549_MK2206_60min_R1 1 AKNEQEHHAGGDSQK 15 1 E9PBY3;Q86SF2 E9PBY3 GALNT7 N-acetylgalactosaminyltransferase 7 1 AKNEQEHHAGGDS(1)QK 45.608000000000004 0.017335 3271600.0 202.0 218.9 157.13 0.0 167.77 358.7 406.88 350.68 292.45 206.72 281.79 True False 236.09266157415777 230.04107500250416 179.41339674610242 0.0 143.09125524357518 396.65739591421067 480.8048292599725 400.38996391245894 226.21054194668523 160.02180842672473 211.8137659916432 1.114623785044606 1.0860534674199602 0.8470336944633755 0.0 0.6755521982892303 1.8726705228868845 2.269941365751185 1.8902924559126895 1.0679690287722376 0.7554835148582276 1.0 7.726652544367003 AKNEQEHHAGGDS(ph)QKDIMQR ddPTM_A549_MK2206_60min_R1 7 AKNEQEHHAGGDSQKDIMQR 20 2 E9PBY3;Q86SF2 E9PBY3 GALNT7 N-acetylgalactosaminyltransferase 7 1 AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR 156.58 2.549e-27 322895600.0 8479.720000000001 8383.22 7732.380000000001 7333.699999999999 11185.349999999999 7836.7300000000005 8063.31 7588.85 11826.81 12252.819999999998 13116.64 True False 9910.889426750582 8809.890090372284 8828.947754926674 9130.4568292223 9539.999832143541 8666.007566999642 9528.309053824783 8664.592727378411 9148.056418534712 9484.899452046928 9859.416287152231 1.0052207086199845 0.8935508790568484 0.8954838195068042 0.9260646435144607 0.9676029040963693 0.878957467116211 0.966417156585739 0.8788139657587244 0.927849697395931 0.9620142994070212 1.0 13.267286521066639 -10.457198091456021 0.8082595491847182 0.9998631166805798 0.9246398709234365 0.19525712396101547 0.039768268846660085 0.5238934186854324 0.6212710222777265 0.02308964624398859 0.006846148513712687 3.489811010615867e-11 10.457198091456021 -0.07522324575714334 AKNEQEHHAGGDS(ph)QKDIMQR ddPTM_A549_PD325901_60min_R1 8 AKNEQEHHAGGDSQKDIMQR 20 2 E9PBY3;Q86SF2 E9PBY3 GALNT7 N-acetylgalactosaminyltransferase 7 1 AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR;AKNEQEHHAGGDS(1)QKDIMQR 134.45 1.4155999999999998e-17 540755000.0 14966.949999999999 14790.210000000001 14557.84 14405.16 15118.06 14923.32 14085.779999999999 16231.560000000001 15821.49 17235.58 19515.51 True False 16486.38374591376 16036.63290294652 15545.822565803472 15294.934016707968 14056.21962007564 14801.789429730976 14621.822065934577 15907.808802387515 15156.567796013547 16147.322537357519 17115.225989010636 0.9632583149354473 0.9369804940491782 0.90830366924662 0.8936448765869967 0.8212698815137396 0.8648316673840547 0.8543166228317974 0.9294536229087258 0.8855604831478879 0.9434478135272891 1.0 14.062992721331758 -10.678263971999815 0.7611585869689385 1.0061142008124437 0.8926146265116555 0.3056673039868564 0.041310216869610825 0.526845965858707 0.49603581298232075 0.03668931414026568 0.00785763322701158 2.097664497839151e-11 10.678263971999815 -0.11349957430078828 AKNS(ph)PPQAPSTR ddPTM_A549_MK2206_60min_R1 4 AKNSPPQAPSTR 12 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 AKNS(1)PPQAPSTR;AKNS(1)PPQAPSTR;AKNS(0.989)PPQAPS(0.006)T(0.006)R;AKNS(0.996)PPQAPS(0.002)T(0.002)R 99.74700000000001 6.905e-05 133862000.0 12028.6 14803.400000000001 14061.7 12550.399999999998 18621.6 13994.9 14517.599999999999 14453.4 21578.7 20928.5 21548.9 True False 14058.733608964916 15556.829829566332 16055.860504198236 15625.24856340886 15882.387307884354 15475.831028937237 17155.260001141796 16502.213711681103 16691.15890410305 16200.737314525484 16197.713410615424 0.8679455706230303 0.9604337004364406 0.9912424116403847 0.9646576752721535 0.9805326779936471 0.9554330686450415 1.0591161583275592 1.0187989683078427 1.030463898266297 1.0001866870856029 1.0 13.983502545498864 -3.2770643568826996 0.48513314372254684 1.0145544811621787 2.9703732865468083e-16 0.6774439035603672 0.02697070588394049 10.54819818896266 0.35800415085192183 0.005264169998631673 9.323832413565745 0.0005283669487555306 3.2770643568826996 -1.0145544811621785 AKNS(ph)PPQAPSTR ddPTM_A549_PD325901_60min_R1 4 AKNSPPQAPSTR 12 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 AKNS(1)PPQAPSTR;AKNS(0.991)PPQAPS(0.005)T(0.005)R;AKNS(1)PPQAPSTR;AKNS(0.999)PPQAPSTR 105.53 4.4952e-05 243116400.0 18462.8 19089.22 19044.190000000002 19390.54 20534.440000000002 20639.04 19419.839999999997 20343.520000000004 20964.27 21580.2 21646.88 True False 20337.129864405008 20697.935563023417 20336.643255417635 20588.249616688485 19092.17177437226 20470.96250109189 20158.872638144203 19937.75253441731 20083.214637112742 20217.622489100035 18984.45099087827 1.0712519352904477 1.0902572622704996 1.0712263033147007 1.0844795894588057 1.0056741584755728 1.0783015274409498 1.0618622918213554 1.0502148597290004 1.0578770303530194 1.0649569217890096 1.0 14.212530657980254 -14.99999999999999 0.16236796748740467 0.7490405815711757 1.0815934476610138 0.0 0.02825007423053334 27.89380787409264 0.29063387306608013 2.2232936762407665 0.030258176225460884 1.0000000000000245e-15 14.99999999999999 0.33255286608983814 AKNWEDEDFYDS(ph)DDDTFLDR ddPTM_A549_MK2206_60min_R1 1 AKNWEDEDFYDSDDDTFLDR 20 1 A0A087X0M4;Q9BWU0;A0A087WWF4 A0A087X0M4 SLC4A1AP Kanadaptin 1 AKNWEDEDFY(0.003)DS(0.99)DDDT(0.007)FLDR 62.605 0.00058983 2148700.0 927.42 1100.3 1030.9 918.87 1474.7 1014.3 1050.9 1174.1 2110.9 1783.4 1395.5 True False 1083.945822757948 1156.3005702387181 1177.097121527124 1143.993191249642 1257.773583523278 1121.6325527621518 1241.8349269300659 1340.532270530448 1632.7845204146286 1380.5287013749073 1048.9588361593317 1.0333540129436518 1.1023316934651206 1.1221575918431264 1.0905987459319852 1.199068581307254 1.0692817621603803 1.1838738414911805 1.2779646105453348 1.5565763537422708 1.3160942582166417 1.0 10.034742348626812 -8.035859723088137 3.6687679950382197 1.2707534886288974 1.1078373290829933 0.31716503704349996 0.125510094142781 0.3864500967121645 10.902985492088504 0.03219313582669574 0.043267053387787587 9.2074692454851e-09 8.035859723088137 -0.1629161595459041 AKNWEDEDFYDS(ph)DDDTFLDR ddPTM_A549_PD325901_60min_R1 3 AKNWEDEDFYDSDDDTFLDR 20 1 A0A087X0M4;Q9BWU0;A0A087WWF4 A0A087X0M4 SLC4A1AP Kanadaptin 1 AKNWEDEDFYDS(1)DDDTFLDR;AKNWEDEDFYDS(1)DDDTFLDR;AKNWEDEDFYDS(0.995)DDDT(0.005)FLDR 182.41 3.6987e-44 56163000.0 7941.499999999999 7866.4 7645.900000000001 7731.099999999999 7559.7 9088.6 7533.2 8197.1 9599.9 9750.7 10006.0 True False 8747.715233776697 8529.329135133199 8164.796752531747 8208.632488397976 7028.732751549201 9014.585454915721 7819.8800483252135 8033.602409999455 9196.449587551508 9135.039137935133 8775.325433260034 0.9968536552070548 0.9719672734649287 0.9304266621937148 0.9354220023893141 0.8009654804264081 1.0272650881697047 0.8911213729677178 0.9154762944233023 1.0479895768532228 1.0409914945503582 1.0 13.099236913468978 -8.758117924971309 24.977935946217546 1.0226617464458903 0.9321887073345504 0.3596125184342921 0.05680378874704162 67.96345487555124 511096.95105682727 0.009446249209905513 0.010496993449017116 1.7453481702027696e-09 8.758117924971309 -0.09047303911133986 AKPAMPQDSVPS(ph)PR ddPTM_A549_MK2206_60min_R1 10 AKPAMPQDSVPSPR 14 1 P53396 P53396 ACLY ATP-citrate synthase 1 AKPAMPQDS(0.003)VPS(0.997)PR;AKPAMPQDS(0.017)VPS(0.983)PR;AKPAMPQDS(0.001)VPS(0.999)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDS(0.001)VPS(0.999)PR;AKPAMPQDS(0.002)VPS(0.998)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDS(0.001)VPS(0.999)PR 123.36 3.5814e-07 1112842300.0 37561.159999999996 42857.58 37675.8 35655.17999999999 47180.189999999995 37623.299999999996 35600.36 35368.91 55017.8 56159.399999999994 62698.29999999999 True False 43900.56552580591 45038.84776247522 43018.79496675877 44390.70070062187 40240.04655021978 41604.57263367468 42068.48459347612 40382.561305244126 42556.356145373014 43472.9525356028 47128.58172495065 0.9315061883681559 0.9556588828691805 0.9127962988112563 0.941906144337051 0.8538352964887979 0.8827885565596924 0.8926320940229857 0.856859252436721 0.9029840192038492 0.9224328622770225 1.0 15.524314645473732 -10.499900036188038 0.8908266709597128 0.9981512117553824 0.9033539685471512 0.16646535693451237 0.03766950081265544 0.34446264085914763 0.5043532435419402 0.02003133143941508 0.006203752858146204 3.1630056217844733e-11 10.499900036188038 -0.09479724320823113 AKPAMPQDSVPS(ph)PR ddPTM_A549_PD325901_60min_R1 13 AKPAMPQDSVPSPR 14 1 P53396 P53396 ACLY ATP-citrate synthase 1 AKPAMPQDSVPS(1)PR;AKPAMPQDS(0.024)VPS(0.976)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDS(0.005)VPS(0.995)PR;AKPAMPQDS(0.002)VPS(0.998)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDS(0.022)VPS(0.978)PR;AKPAMPQDS(0.049)VPS(0.951)PR;AKPAMPQDS(0.005)VPS(0.995)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR 147.17 9.703300000000001e-14 1872833900.0 57046.15999999999 52622.77999999999 55706.1 55892.99999999999 65034.51 60730.98 57230.210000000014 59964.48 68771.89 66641.18 75320.09 True False 62837.444168036556 57057.48635026248 59486.650933991914 59345.383667786984 60466.710374479655 60236.40703417224 59408.13695912255 58768.4414051755 65881.64662398955 62433.44452174504 66056.19642338934 0.9512725159843888 0.8637719008910333 0.9005461130809029 0.8984075208843515 0.9153828656272655 0.9118963896753157 0.8993575194421454 0.8896734082068133 0.9973575560075999 0.9451565167569723 1.0 16.011406279855667 -8.766689022424138 24.98279267686742 0.9987521878983987 0.9026762310757566 0.6245936226532736 0.02558490653382644 31.303661312298097 148972.28733171534 0.003112810607478128 0.003362174975576559 1.711240214035271e-09 8.766689022424138 -0.09607595682264214 AKPAMPQDSVPSPR ddPTM_A549_PD325901_60min_R1 2 AKPAMPQDSVPSPR 14 1 P53396 P53396 ACLY ATP-citrate synthase 0 ; 45.614 0.012990999999999999 9605600.0 2234.3 2759.5 2617.5 2522.3 3246.8 3190.8 2576.1 3137.0 3394.4 3174.7 3220.3999999999996 False True 2461.1244911952745 2992.052749466093 2795.1392903061587 2678.0967424410755 3018.7559688519286 3164.81518270637 2674.1348951960113 3074.430074071106 3251.7451723439676 2974.248900202309 2824.3112157975825 0.871406974355075 1.0593920148495888 0.9896711363364445 0.948230041881126 1.0688467871269758 1.1205617727268167 0.9468272760588243 1.0885592412318097 1.1513409549753455 1.053088230350133 1.0 11.463683355122965 -6.771907862921715 24.45965422653344 1.0683552156960938 0.9753688351963447 0.31149855766270684 0.06640385788322219 169.27428820846828 395511.24575039087 0.010845202331540623 0.020659446078968146 1.6907996025861559e-07 6.771907862921715 -0.09298638049974917 AKPEGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AKPEGSPR 8 1 Q86V59 Q86V59 PNMAL1 PNMA-like protein 1 1 AKPEGS(1)PR 51.927 0.023417 1248700.0 793.28 594.49 647.39 524.03 399.79 619.11 425.45 580.51 813.44 1143.2 727.57 True False 927.1662701660788 624.7470017279066 739.1996367304731 652.4173735246005 340.98142059861067 684.6238092680428 502.748757885999 662.7990702373148 629.1971387967578 884.9503260131183 546.8942890895343 1.6953299543676323 1.1423542249233962 1.3516316616892954 1.192949691631888 0.6234868920761161 1.2518393827220242 0.9192795900702704 1.211932696062228 1.1504913314129515 1.6181378077404638 1.0 9.095118186696066 -2.000004072036674 0.8320102097455732 1.0649719422048436 192.2522498145194 0.25760521143262705 0.24684668839882065 356.00044044685825 1.0113229591738313 0.02633246867011519 128723.94139094542 0.009999906238330128 2.000004072036674 191.18727787231455 AKPEGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AKPEGSPR 8 1 Q86V59 Q86V59 PNMAL1 PNMA-like protein 1 1 AKPEGS(1)PR;AKPEGS(1)PR 65.347 0.0074703 4911200.0 1771.57 1698.65 1572.37 1600.9 1709.63 1048.81 1056.08 1649.85 1310.33 1801.6100000000001 2028.87 True False 1951.4184822390962 1841.8011969126944 1679.0804836289183 1699.7839570923036 1589.551486703315 1040.2688390918472 1096.2697023091505 1616.9424474677137 1255.2613868953185 1687.8560371353149 1779.331852066588 1.0967141851435076 1.035108315952166 0.9436578576833581 0.9552933901105102 0.8933417815553325 0.5846401489883053 0.6161131219203987 0.9087357400980213 0.7054678335788837 0.948589795194736 1.0 10.797119888399598 -6.236002308755965 1.3341127239050135 0.8249955016298365 1.068270908395585 0.37463391073971297 0.1279985835785311 0.5131615648039535 1.6442051345166708 0.02298829156764048 0.10224883682182698 5.807613301236937e-07 6.236002308755965 0.24327540676574855 AKPESVSTCSVTS(ph)PDDMSTK ddPTM_A549_MK2206_60min_R1 2 AKPESVSTCSVTSPDDMSTK 20 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;A8MXE8;Q7Z5J4-4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 AKPESVST(0.001)CS(0.003)VT(0.169)S(0.825)PDDMS(0.002)TK;AKPESVSTCS(0.001)VT(0.143)S(0.854)PDDMS(0.002)TK 86.006 6.7629999999999995e-06 6186500.0 1160.71 1089.6299999999999 1128.68 1014.39 1899.3000000000002 1355.73 1021.7 1131.04 1406.78 1831.0900000000001 1664.6100000000001 True False 1356.6094713650525 1145.0875128139724 1288.7437958339654 1262.9155955376982 1619.9154859874966 1499.1924487392603 1207.3296649009872 1291.368383664729 1088.1465761660386 1417.4454972527649 1251.2413961011719 1.0842108290152517 0.9151611482660568 1.0299721539342046 1.009330093675691 1.2946466533437124 1.198164042055111 0.9649054680119982 1.032069741049642 0.8696535932687877 1.1328313638515155 1.0 10.289144433367833 AKPESVSTCSVTS(ph)PDDMSTK ddPTM_A549_PD325901_60min_R1 2 AKPESVSTCSVTSPDDMSTK 20 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;A8MXE8;Q7Z5J4-4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 AKPESVSTCSVT(0.122)S(0.874)PDDMS(0.003)T(0.001)K;AKPESVSTCS(0.001)VT(0.174)S(0.825)PDDMSTK 86.211 1.0346e-08 4015900.0 699.82 935.67 878.44 1089.2 1104.1 901.91 758.96 1078.9 938.98 987.1 1274.2 True False 770.8652112197454 1014.5221946341512 938.056220888842 1156.4774102473214 1026.5518249382205 894.5651439873076 787.8426381188482 1057.380493119324 899.5179359909076 924.7743375404606 1117.4814778193017 0.689823703140067 0.9078648861491025 0.8394378247050703 1.0348962673673283 0.9186298344214842 0.8005189900176224 0.7050162832732368 0.9462174667831978 0.8049510921167687 0.8275522734793801 1.0 10.126035203695114 -10.893560676653868 1.066344383443065 1.0026070238159333 0.8518211715691619 0.0 0.10887951440731468 0.6323629879594445 1.2396456787698258 0.07329669692454162 0.016325987070788275 1.2777306813057653e-11 10.893560676653868 -0.15078585224677132 AKPPADPAAAAS(ph)PCR ddPTM_A549_MK2206_60min_R1 4 AKPPADPAAAASPCR 15 1 Q9GZT9;Q9GZT9-2 Q9GZT9 EGLN1 Egl nine homolog 1 1 AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR 128.01 9.271499999999999e-10 479949000.0 13388.0 15255.2 14524.800000000001 13542.1 18937.300000000003 16659.4 15234.5 15934.1 22566.699999999997 22596.0 22350.0 True False 15647.567094825872 16031.6245197725 16584.635047780754 16859.91510792797 16151.648256089611 18422.286650385275 18002.411451437907 18192.807471134685 17455.378481614855 17491.54790639645 16799.87817138019 0.9314095575694493 0.9542702843573909 0.9871878163993999 1.003573653090536 0.9614146061847707 1.0965726335902228 1.0715798809842751 1.0829130595796492 1.0390181585573255 1.041171116121221 1.0 14.036163150518787 -6.090066876526743 0.9825760314785709 1.0310993970917024 0.9308216443054639 0.5398896072404231 0.03566139366916041 0.5907921855138174 0.861715225671581 0.006284586118085874 0.04582473971440851 8.127053589289312e-07 6.090066876526743 -0.10027775278623852 AKPPADPAAAAS(ph)PCR ddPTM_A549_PD325901_60min_R1 3 AKPPADPAAAASPCR 15 1 Q9GZT9;Q9GZT9-2 Q9GZT9 EGLN1 Egl nine homolog 1 1 AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR 133.84 4.961700000000001e-10 775048000.0 18050.2 18347.699999999997 19104.92 17355.7 20632.6 18926.1 18969.399999999998 19476.8 19542.0 20153.0 19792.7 True False 19882.643016145066 19893.925070258745 20401.494758416797 18427.722171345442 19183.437354605867 18771.972116528465 19691.290897453975 19088.31994474598 18720.717699135592 18880.53614066751 17358.323376262815 1.1454241625279438 1.1460741132097654 1.1753148225315044 1.061607263092299 1.105143448406939 1.0814392444260363 1.134400510384629 1.099663805713454 1.0784865158541652 1.0876935364901827 1.0 14.083339985536632 -14.999999998246722 0.08910359849004111 0.6017740242752659 1.2151195294109736 0.327920084045472 0.03787600798626038 45.90813834721822 0.2988660093821405 3.4523675580425874 0.2790902971468774 1.0000000040370727e-15 14.999999998246722 0.6133455051357076 AKPPTEGAGS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 AKPPTEGAGSPAK 13 1 K7EPQ1;A0A0R4J2E4;K7ENL6;Q8TES7-4;Q8TES7-3;Q8TES7-2;Q8TES7-5;Q8TES7;Q8TES7-6 K7EPQ1 FBF1 Fas-binding factor 1 1 AKPPT(0.006)EGAGS(0.994)PAK;AKPPT(0.016)EGAGS(0.984)PAK 74.12 0.00032662 9653900.0 3026.1 3099.5 3045.8 2690.5 3660.7 2457.1 2741.2 2692.2 4245.4 4072.5 4723.9 True False 3536.83169895821 3257.251310965107 3477.740239351359 3349.6726207811334 3122.215879299968 2717.1086911090247 3239.240557332473 3073.8275945167156 3283.823678510713 3152.519421525911 3550.825256992523 0.9960590688018917 0.917322333604198 0.9794174558443167 0.943350454710418 0.8792930243896095 0.7652048451999467 0.9122500610114631 0.8656656895361236 0.9248057679109912 0.8878272495436825 1.0 11.793938648942852 -10.072749956745719 0.9193435643407266 0.9926935390615211 0.9069257462889883 0.0 0.06636926787913812 0.5617798228415067 0.9530006855930915 0.025276785754024977 0.011994252089420569 8.457656510891183e-11 10.072749956745719 -0.08576779277253288 AKPPTEGAGS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 AKPPTEGAGSPAK 13 1 K7EPQ1;A0A0R4J2E4;K7ENL6;Q8TES7-4;Q8TES7-3;Q8TES7-2;Q8TES7-5;Q8TES7;Q8TES7-6 K7EPQ1 FBF1 Fas-binding factor 1 1 AKPPTEGAGS(1)PAK;AKPPTEGAGS(1)PAK 81.656 0.00016482 15941800.0 5004.7 5755.799999999999 5878.5 5583.7 6528.5 7244.4 5720.200000000001 5564.8 6141.799999999999 5906.9 6654.8 True False 5512.773459734589 6240.861465981859 6277.450360292167 5928.5924674972175 6069.960682102324 7185.404008273165 5937.8853412135495 5453.805698498853 5883.681504684828 5533.937325922141 5836.301788252933 0.9445662098609211 1.0693178133014312 1.0755870049295873 1.0158132123033876 1.0400354372215108 1.2311570355624257 1.0174054661061358 0.9344625923004956 1.0081181059771889 0.9481924558905815 1.0 12.510838769898529 -7.984441131491609 24.999108443336365 0.9976519280335386 1.065781071406609 0.24680375523399078 0.06866567723850468 303.60000841288314 487806.162024097 0.01015167373194816 0.014024318506189914 1.0364750888485509e-08 7.984441131491609 0.0681291433730703 AKPS(ph)PAPPSTTTAPDASGPQK ddPTM_A549_MK2206_60min_R1 2 AKPSPAPPSTTTAPDASGPQK 21 1 Q5QNY5;P40855;E9PS71;B7Z8B3 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 AKPS(0.997)PAPPS(0.003)T(0.001)TTAPDASGPQK;AKPS(0.999)PAPPS(0.001)TTTAPDASGPQK 130.9 4.8626999999999996e-18 10329800.0 2598.3 2288.21 2423.7 1972.7 2600.6 2351.18 2277.6400000000003 2238.2 2657.4 2842.3 2948.5 True False 3036.829517664032 2404.670115264871 2767.4171049037627 2456.011588557867 2218.0551849939884 2599.980307013027 2691.4577057503047 2555.4717042000257 2055.5031429958003 2200.222455936918 2216.306075539799 1.3702211762084295 1.08499008408809 1.2486619675171609 1.1081554193545609 1.000789200315558 1.1731142804270753 1.2143889941260837 1.1530319446413195 0.9274455210321824 0.992743051250733 1.0 11.11394141838266 -8.752275885091567 23.67244740182382 0.9657381624894341 1.1630053626221426 0.4749967364150949 0.09140113261278737 59.41811243629646 153496.78609850418 0.015054271709820783 0.01694165039194656 1.7689848556304463e-09 8.752275885091567 0.1972672001327085 AKPS(ph)PAPPSTTTAPDASGPQK ddPTM_A549_PD325901_60min_R1 1 AKPSPAPPSTTTAPDASGPQK 21 1 Q5QNY5;P40855;E9PS71;B7Z8B3 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 AKPS(0.999)PAPPS(0.001)TTTAPDASGPQK 132.35 4.1309e-18 6737400.0 1477.5 1313.8 1563.1 1523.2 1623.3 1221.6 1405.7 1417.3 1682.8 1432.9 2046.7 True False 1627.4947123219881 1424.5185367815016 1669.18136568388 1617.2846045618076 1509.2850080809828 1211.6516946201896 1459.1946827285556 1389.0308396496596 1612.077768094634 1342.4264494597564 1794.9688751002705 0.9066980129285379 0.7936174028097981 0.9299221779489832 0.9010098319790993 0.8408418825628223 0.6750265764650122 0.8129359249457973 0.7738467551823514 0.898109037130006 0.747882856400374 1.0 10.809743112483226 -9.513512744457014 1.1128583995833452 0.9781249917872107 0.8303832053332505 0.0 0.0982793956309817 0.29760915978466657 0.7660878315393038 0.019804690960067962 0.014675649064849083 3.065400723318597e-10 9.513512744457014 -0.1477417864539602 AKPS(ph)PHPIK ddPTM_A549_PD325901_60min_R1 2 AKPSPHPIK 9 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 AKPS(1)PHPIK;AKPS(1)PHPIK 45.358999999999995 0.02017 5060500.0 3993.9 3186.0 3061.3999999999996 2927.8 3915.8 3694.3 3027.4 3224.5 4421.5 4170.9 4040.8 True False 4399.357787846216 3454.4954012679705 3269.165013693706 3108.643556483757 3640.7677167766387 3664.2148456412624 3142.6093636568467 3160.1848179286853 4235.679731180432 3907.5486621897544 3543.807216741668 1.2414213073055307 0.9747977782053803 0.9225008059833232 0.8772044770939826 1.0273605459058013 1.0339769128328324 0.8867890298350652 0.8917485135758311 1.195234241628669 1.1026414314327533 1.0 11.791084408020115 -8.755857700535946 24.99907893180383 1.0921939468412556 0.9763342634382758 0.19368275901787657 0.10588327023982072 178.6787988404266 800260.844608768 0.019810850055892303 0.022151221836779922 1.7544552665646633e-09 8.755857700535946 -0.11585968340297981 AKPSPAPPST(ph)TTAPDASGPQK ddPTM_A549_PD325901_60min_R1 1 AKPSPAPPSTTTAPDASGPQK 21 1 Q5QNY5;P40855;E9PS71;B7Z8B3 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 AKPS(0.357)PAPPS(0.224)T(0.41)T(0.009)TAPDASGPQK 114.2 6.4835e-15 6810600.0 1514.3 1240.9 1833.8 1409.8 2189.7 1316.9 1912.4 1941.1 1697.1 2269.3 1798.6 True False 1668.0306212312603 1345.4749979389296 1958.2526955352173 1496.8801441118933 2035.9030260549073 1306.1756030168037 1985.1774285054337 1902.3832377365081 1625.7767888242236 2126.0160107188385 1577.3836022647909 1.0574666928427046 0.8529789431100404 1.2414562270861562 0.9489639311342456 1.2906835237362548 0.8280646515796224 1.2585254630865548 1.2060371586246277 1.03067940258156 1.3478116595521388 1.0 10.623317834953278 -8.979587119433019 24.399200527820405 1.0135349098328574 1.0846849582340023 0.0 0.18155548789668888 269.1084895621706 321666.1586783934 0.024621604101485128 0.02514867707677931 1.048124518809343e-09 8.979587119433019 0.07115004840114492 AKPVGS(ph)PLFK ddPTM_A549_MK2206_60min_R1 2 AKPVGSPLFK 10 1 Q92576-2;Q92576;D6R9X2;E9PE34;A0A1B0GX99;E7EVH3 Q92576-2 PHF3 PHD finger protein 3 1 AKPVGS(1)PLFK;AKPVGS(1)PLFK 96.59100000000001 0.00014866 97095000.0 11887.3 12885.5 13739.5 12540.2 18389.7 12926.3 14166.6 13474.2 20307.3 17857.0 19412.3 True False 13893.585623418237 13541.316911579572 15687.967699313147 15612.549562950979 15684.599490688292 14294.152486216504 16740.487844559386 15384.209113006867 15707.72897409446 13823.091297774887 14591.69015777557 0.9521573904867128 0.9280156558398219 1.0751302645330223 1.0699616969752757 1.0748994339309168 0.9796091015953683 1.1472617403158585 1.054313033422587 1.0764845473177882 0.9473262622979206 1.0 13.832859380078494 -5.756722102199991 24.999386879989032 1.0484382124506693 0.940086481995105 0.3843597027573685 0.05227712513860501 76.34804883120616 404594.30824954616 0.006271215096064074 0.0227986956901272 1.750966744668078e-06 5.756722102199991 -0.10835173045556423 AKPVGS(ph)PLFK ddPTM_A549_PD325901_60min_R1 3 AKPVGSPLFK 10 1 Q92576-2;Q92576;D6R9X2;E9PE34;A0A1B0GX99;E7EVH3 Q92576-2 PHF3 PHD finger protein 3 1 AKPVGS(1)PLFK;AKPVGS(1)PLFK;AKPVGS(1)PLFK 99.991 1.2177e-05 194229000.0 26715.0 24866.0 25899.0 25296.0 31333.0 30055.0 25845.0 28351.0 30782.0 28915.0 30046.0 True False 29427.08713345645 26961.545087234575 27656.66188333876 26858.47646861572 29132.278172981867 29810.2420447035 26828.545617926644 27785.51706407077 29488.339587288494 27089.30196533523 26350.5324772867 1.1167549330861395 1.0231878657660731 1.0495674767550864 1.0192764222797719 1.1055669633277028 1.1312956225988586 1.0181405495715117 1.054457517624017 1.1190794574153855 1.028036226162994 1.0 14.685544494906404 -5.2346914494646635 22.434427441848356 1.0582220649090288 1.1167552533662966 0.14403058117181045 0.04266748958651291 3863.3492103328304 3240119.7420651787 0.00690127471708234 0.6220234910664197 5.825169280173805e-06 5.2346914494646635 0.05853318845726774 AKRPS(ph)SEDFVFL ddPTM_A549_PD325901_60min_R1 2 AKRPSSEDFVFL 12 2 Q86TL0;K7EQ67;K7EN30;Q86TL0-2 Q86TL0 ATG4D Cysteine protease ATG4D;Cysteine protease ATG4D, mitochondrial 1 AKRPS(0.5)S(0.5)EDFVFL;AKRPS(0.5)S(0.5)EDFVFL 48.70399999999999 0.010752 4992500.0 131.59 253.45000000000002 355.47 489.11 394.4 224.67700000000002 607.06 454.04 375.41999999999996 622.1400000000001 555.13 True False 144.948919928562 274.8091209828521 379.5943318147586 519.3212138505949 366.6987046061354 222.84730500342195 630.1620004959783 444.9838160125106 359.64240295821725 582.8579742249237 486.85252925900846 0.2977265418527759 0.564460703123208 0.7796905818534059 1.0666910052639633 0.7532028336470847 0.45773060960080963 1.2943590977232622 0.9140012411762095 0.7387091189720107 1.1971961511877856 1.0 8.927341026710838 -5.55553513702745 1.9801163358287315 0.87918138383134 0.27522772739362056 0.43059220561459366 0.2218987849374397 0.3089242175989794 1.915030311581178 0.028337247422492624 0.2716803196368314 2.7826902284214944e-06 5.55553513702745 -0.6039536564377195 AKS(ph)DESIKEEDKDQDEK ddPTM_A549_PD325901_60min_R1 1 AKSDESIKEEDKDQDEK 17 3 P26358;P26358-2;K7ENQ6 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 AKS(0.978)DES(0.022)IKEEDKDQDEK 52.50899999999999 0.0027659000000000004 12085000.0 1940.8 1911.8 1727.3 1746.0 2039.2 2162.6 2271.8 1975.0 1902.7 2201.8 2605.3 True False 2137.828587258554 2072.9140954626837 1844.524965098693 1853.846454546296 1895.9736268580928 2144.9885026077445 2358.254592176659 1935.6070756424726 1822.736135817484 2062.7779722384616 2284.864616357421 0.9356478156096291 0.9072371643477796 0.8072797626142391 0.811359430784016 0.829796922445538 0.9387814434394499 1.0321200544197835 0.8471430043536926 0.7977436049245352 0.9028009613659236 1.0 11.157892969378185 -7.2596681872600515 24.789873267631325 0.9102662799421144 0.8555466480781375 0.15170300505849266 0.0703553241270558 316.0885841503824 4424007.334778417 0.013613842600267208 0.02282180196920112 5.49960898395219e-08 7.2596681872600515 -0.05471963186397688 AKS(ph)FLK ddPTM_A549_MK2206_60min_R1 1 AKSFLK 6 1 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 AKS(1)FLK 63.48 0.016693 3398000.0 1588.9 2200.3 1950.8 1862.7 2699.5 2231.8 2007.9 2266.6 3361.4 3300.9 2756.3 True False 1857.0674751246504 2312.2858717588397 2227.4527739597556 2319.0615836197803 2302.407126006025 2467.9675946510592 2372.7094393214197 2587.897491171377 2600.0482670527895 2555.224397425386 2071.834639989943 0.8963396205855816 1.1160571539483788 1.07511127141429 1.119327546155439 1.1112890389829573 1.1911991174464769 1.1452214349176715 1.2490849613287378 1.254949703449987 1.2333148351249643 1.0 11.016693145994221 -4.504099651773133 1.1825194249059634 1.1369662548135597 3.111370073534397e-12 0.4783209829638453 0.07527568859150487 7.289707152828183 2.2602701104480074 0.014453183285670352 15.803360047869656 3.132566853430917e-05 4.504099651773133 -1.1369662548104484 AKS(ph)FLK ddPTM_A549_PD325901_60min_R1 1 AKSFLK 6 1 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 AKS(1)FLK 59.8 0.018088999999999997 7559500.0 3681.3 4234.1 4046.4 4108.9 5279.9 4232.8 4281.5 4649.1 4029.2 4916.7 4104.9 True False 4055.0228659701766 4590.922466575243 4321.013036979884 4362.697421011036 4909.058038666163 4198.329480180367 4444.434825426697 4556.370053351605 3859.8667359204333 4606.258722910728 3600.023323105045 1.1263879430849606 1.2752479788424094 1.2002736230200255 1.211852543568573 1.3636183985697254 1.1661950780250163 1.234557231032976 1.2656501484611782 1.0721782581650807 1.2795080224474205 1.0 11.813790537888979 -8.87771402116657 3.735887647051245 1.0302505441348935 1.2328196130961944 0.05782244063697328 0.09586605319950034 0.08853592676828254 2.2493383426548674 0.010500209262021698 0.011058371296017435 1.325213888831961e-09 8.87771402116657 0.2025690689613009 AKS(ph)IVFHR ddPTM_A549_MK2206_60min_R1 4 AKSIVFHR 8 1 B4DV51;B5MDF5;J3KQE5;P62826;F5H018 B4DV51;B5MDF5 RAN GTP-binding nuclear protein Ran 1 AKS(1)IVFHR;AKS(1)IVFHR;AKS(1)IVFHR;AKS(1)IVFHR 71.34899999999999 0.0017733 56473800.0 9499.69 9972.8 8252.79 9069.75 11419.920000000002 8587.48 8518.260000000002 7392.97 12395.599999999999 11855.039999999999 11392.55 True False 11103.005426878271 10480.372922727147 9423.15971827319 11291.839157156546 9740.064895876545 9496.201433692126 10065.917579856601 8440.94613752107 9588.016391705698 9176.978230317141 8563.465416615547 1.2965551779230986 1.2238471708418717 1.1003909351919132 1.3186062660155293 1.1373975863764292 1.1089203928198048 1.175449084003524 0.9856927922127466 1.1196420987585507 1.071643053816882 1.0 13.063979021432923 -2.0000000010351817 0.09903472585394452 0.9235529990923341 1.9162486949601998 0.5293956857698952 0.07036642737474717 58.41792207693981 0.3978193777792282 0.4481653093850082 7.910959399854123 0.00999999997616406 2.0000000010351817 0.9926956958678657 AKS(ph)IVFHR ddPTM_A549_PD325901_60min_R1 4 AKSIVFHR 8 1 B4DV51;B5MDF5;J3KQE5;P62826;F5H018 B4DV51;B5MDF5 RAN GTP-binding nuclear protein Ran 1 AKS(1)IVFHR;AKS(1)IVFHR;AKS(1)IVFHR;AKS(1)IVFHR 79.65899999999999 0.0011302999999999999 110792900.0 11062.16 10669.310000000001 11763.06 11243.51 14305.97 13372.52 11910.97 12407.1 13924.099999999999 12806.58 11685.78 True False 12185.182339668225 11568.4501976467 12561.371988626077 11937.996076836089 13301.168020117242 13263.618630764868 12364.24848128287 12159.63065731834 13338.918499362075 11997.970353215378 10248.503142262787 1.1889719084359702 1.1287941309146614 1.225678698074988 1.1648526532236858 1.297864462300438 1.294200572185839 1.2064443274935606 1.1864786972816004 1.3015479738065385 1.170704656735493 1.0 13.323125590067331 -10.899879876415877 1.0978783219058126 0.9973220314164777 1.2265774458365124 0.24463225033377145 0.07263275769748749 0.2455593223385183 0.5154407927669835 0.04388279359682517 0.009977512923424109 1.2592736721453508e-11 10.899879876415877 0.22925541442003472 AKS(ph)LDGVTNDR ddPTM_A549_MK2206_60min_R1 2 AKSLDGVTNDR 11 1 E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7 E9PRL8 DHCR7 7-dehydrocholesterol reductase 1 AKS(0.996)LDGVT(0.004)NDR;AKS(0.893)LDGVT(0.107)NDR 68.57600000000001 0.0011214 19882400.0 6010.4 6466.1 5452.0 5575.5 7843.299999999999 5942.5 5167.9 5738.0 8602.0 8769.8 8218.9 True False 7024.808579828303 6795.196871053872 6225.175581109596 6941.497750293708 6689.560959956684 6571.331405687749 6106.840535618884 6551.37907188801 6653.660734571335 6788.696089109381 6177.920299899632 1.1370830698386365 1.0999165643435493 1.007649059702297 1.1235978150133277 1.082817620691119 1.0636801847046342 0.9884945481925524 1.0604505648922737 1.0770065671904883 1.0988643037722052 1.0 12.592905543830739 -7.526344201852169 24.9845623276719 1.0357734519583393 1.0865426855392477 0.18728157834817338 0.04279865534101532 116.0758365152396 836856.3477532815 0.006548087616481612 0.00973735090684 2.9761567293772215e-08 7.526344201852169 0.05076923358090846 AKS(ph)LDGVTNDR ddPTM_A549_PD325901_60min_R1 2 AKSLDGVTNDR 11 1 E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7 E9PRL8 DHCR7 7-dehydrocholesterol reductase 1 AKS(0.955)LDGVT(0.045)NDR;AKS(1)LDGVTNDR 106.6 4.2972e-05 47193000.0 9470.4 9371.7 8707.099999999999 8705.2 11013.8 11495.3 11687.8 12482.6 11442.400000000001 12801.8 12057.4 True False 10431.828036260004 10161.486048984008 9298.016166045752 9242.900433056357 10240.228683547304 11401.686088054574 12132.58562480956 12233.624750589732 10961.515720017862 11993.492163231138 10574.416238156053 0.9865157377310775 0.9609500723376054 0.8792935663432068 0.8740813889758624 0.9683965954165028 1.0782331460448336 1.1473527570279585 1.1569078117472524 1.0366071727406592 1.1341989849004224 1.0 13.368290400950135 -7.0583565637736765 5.002539860223426 1.0436606213347772 0.923859998008333 0.5542020732232515 0.06379816180655827 0.16539874138039473 8.626336555882139 0.01016013955691736 0.018111481249051462 8.742656922420695e-08 7.0583565637736765 -0.11980062332644426 AKS(ph)LDR ddPTM_A549_PD325901_60min_R1 2 AKSLDR 6 1 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AKS(1)LDR;AKS(1)LDR 53.327 0.024222999999999998 204390000.0 15258.5 14671.7 12083.6 12035.400000000001 13342.1 9058.3 8990.3 9706.7 11536.3 16025.8 16844.6 True False 16807.53168728599 15908.135649335625 12903.665760589687 12778.799323623414 12404.996923746256 8984.532208069797 9332.430786180927 9513.09225374116 11051.469429563902 15013.928253019863 14772.82098671716 1.1377333890661994 1.0768515819449291 0.873473371957319 0.86502092830566 0.8397175417545565 0.6081798605796518 0.6317297687809317 0.6439590828518647 0.7480947233775271 1.0163210037215973 1.0 13.850657725959536 -5.74058266104052 1.919806949900931 0.8200302607560774 1.1507610044723737 0.44673051416844256 0.13144226311262563 0.34476029835719496 2.267994137741488 0.022132684218544012 0.1445957947047625 1.817261136450464e-06 5.74058266104052 0.3307307437162963 AKS(ph)LDRR ddPTM_A549_MK2206_60min_R1 1 AKSLDRR 7 2 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AKS(1)LDRR 61.65 0.009150700000000001 111970000.0 4858.5 4738.1 4090.0 3032.9 5118.5 3881.0 3829.8 4613.9 5635.8 7089.2 7227.9 True False 5678.496021079431 4979.2490519386265 4670.0235008690815 3775.9606361520555 4365.575430435947 4291.684844000702 4525.625086265835 5267.934454476144 4359.300298523268 5487.7447963367695 5433.012950108228 1.0451835976143427 0.916480247270428 0.8595642130350624 0.6950030619891743 0.803527521565908 0.7899272251716626 0.8329862505068542 0.96961566314161 0.8023725212060149 1.0100739399539718 1.0 12.407536770477629 -10.915851392179682 0.9940119460497172 1.0064344942395858 0.8490102716702468 0.2799962263989386 0.09031737052156291 0.6773161383072596 1.1043897515877854 0.08037765665601401 0.016084920327140623 1.2138041215178769e-11 10.915851392179682 -0.15742422256933897 AKS(ph)LDRR ddPTM_A549_PD325901_60min_R1 1 AKSLDRR 7 2 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AKS(1)LDRR 61.78 0.0091187 1083600000.0 5134.6 5132.5 4782.8 4959.6 5307.9 4062.1 4266.2 3692.4 4606.3 5434.2 6166.6 True False 5655.860812107261 5565.033787510316 5107.38956931282 5265.943227931161 4935.091415260922 4029.0196043849623 4428.552575554218 3618.7521853682374 4412.71322983974 5091.083684593627 5408.147293298152 1.0458037670527351 1.0290092864901403 0.9443880301932539 0.9737055857292918 0.9125290321468412 0.7449907308141879 0.8188668568702148 0.6691297387282042 0.8159380635412857 0.9413729709067957 1.0 12.400918729258704 -6.341095766036282 1.3658040617487581 0.8728075516020551 1.0309151207361826 0.3863678361095446 0.09090932871086099 0.5404553378333046 1.8677266600572369 0.017160468611532118 0.06681980065063818 4.559363665893436e-07 6.341095766036282 0.1581075691341275 AKS(ph)LSAMDVEK ddPTM_A549_MK2206_60min_R1 5 AKSLSAMDVEK 11 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AKS(0.869)LS(0.131)AMDVEK;AKS(0.999)LS(0.001)AMDVEK;AKS(0.997)LS(0.003)AMDVEK;AKS(0.998)LS(0.002)AMDVEK;AKS(0.989)LS(0.011)AMDVEK 121.79 2.69e-06 66105700.0 15562.199999999999 18423.600000000002 19454.600000000002 17315.7 24173.699999999997 18406.2 16277.2 17223.6 27757.0 26660.5 26819.1 True False 18188.7189007394 19361.282546441933 22213.55481662779 21558.04727733131 20617.78075270676 20353.931866953288 19234.55654451048 19665.098045062798 21470.0838188208 20637.874533478593 20159.177300494986 0.9022550191218764 0.9604202720101349 1.1019078053389788 1.0693912234603926 1.0227491154711217 1.009660839009215 0.9541340034763321 0.975491100253379 1.0650277786035258 1.0237458714633088 1.0 14.299149142955008 -5.530482953065566 24.009174437532373 1.0268428576388886 0.9167962924388176 0.46468626686137926 0.04054216425413889 62.54963627376307 197493.1786110633 0.006143761356559444 0.02390551421243993 2.9479291865024455e-06 5.530482953065566 -0.11004656520007106 AKS(ph)LSAMDVEK ddPTM_A549_PD325901_60min_R1 2 AKSLSAMDVEK 11 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AKS(0.752)LS(0.248)AMDVEK;AKS(0.873)LS(0.127)AMDVEK 139.6 2.4672e-09 40380000.0 9100.2 8889.7 11197.7 10010.400000000001 11737.2 10851.1 10414.8 10968.2 12099.5 12389.7 12440.0 True False 10024.045604786837 9638.866217404862 11957.643259240218 10628.719672732088 10912.819563141824 10762.73223927074 10811.140913197232 10749.430646613555 11591.000092144664 11607.41222756057 10909.958863657283 0.9187977452580911 0.8834924437261976 1.0960300958670826 0.9742217918105956 1.0002622099240053 0.9865052997700131 0.990942408519135 0.9852860841136192 1.0624238126832937 1.0639281387418067 1.0 13.41335804149424 -5.742378504969407 24.998035644326997 1.019343170736176 0.9011450076392888 0.5788372805242665 0.038336894492733954 125.8309333785244 165022.6879966672 0.005252540720286616 0.02027578052282107 1.8097621251867593e-06 5.742378504969407 -0.11819816309688713 AKS(ph)PGVR ddPTM_A549_PD325901_60min_R1 1 AKSPGVR 7 1 Q68D10-2;Q68D10 Q68D10-2 SPTY2D1 Protein SPT2 homolog 1 AKS(1)PGVR 41.876000000000005 0.028729 13497000.0 2284.0 1793.5 1551.1 1628.8 1694.5 1487.4 1273.7 1624.2 1908.6 1866.8 2615.1 True False 2515.8699986080687 1944.6445392887977 1656.3669735220185 1729.4072767268078 1575.4841657076488 1475.287107545898 1322.1713504953836 1591.8040568397496 1828.3881793352853 1748.929929409918 2293.45927848474 1.0969760929307943 0.8479089022995865 0.7222133783061365 0.7540605987429634 0.6869466488842791 0.643258470462402 0.5764965451529298 0.6940624896952322 0.7972185058996463 0.7625729158642024 1.0 11.163309576538174 -10.06465717240431 0.8943071264009049 0.9811346724876174 0.7476460217451996 0.021628940096446447 0.14434395421801297 0.4676419015558844 0.7510016004293439 0.05684342141263964 0.026626544893135897 8.616736801228234e-11 10.06465717240431 -0.23348865074241787 AKS(ph)PMFPALGEASSDDDLFQSAK ddPTM_A549_PD325901_60min_R1 1 AKSPMFPALGEASSDDDLFQSAK 23 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 AKS(0.918)PMFPALGEAS(0.063)S(0.019)DDDLFQSAK 44.341 0.0093451 1511300.0 874.79 1150.1 896.17 1072.3 1246.6 1133.3 929.32 1139.9 971.56 1161.0 1370.7 True False 963.5980368136385 1247.0229632763005 956.9894853079919 1138.5335356300063 1159.0431165365324 1124.070780544417 964.6857811434165 1117.16380026575 930.7287118909101 1087.6942618625 1202.1125895832026 0.8015871767450151 1.0373595402645848 0.7960897286998716 0.9471105664276916 0.9641718476123743 0.9350794511969596 0.8024920373539163 0.929333749555933 0.7742442096988711 0.9048189589625929 1.0 10.231356309518517 AKS(ph)PMFPALGEASSDDDLFQSAKPK ddPTM_A549_PD325901_60min_R1 2 AKSPMFPALGEASSDDDLFQSAKPK 25 2 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 AKS(1)PMFPALGEASSDDDLFQSAKPK;AKS(1)PMFPALGEASSDDDLFQSAKPK 105.56 2.5315e-12 7347900.0 3733.1000000000004 3743.8 4595.1 3691.2 4691.9 4597.8 4233.5 4408.9 4137.9 4206.7 4334.200000000001 True False 4112.081563837033 4059.3031648672404 4906.9511185810225 3919.1970406765677 4362.357130176287 4560.357041195734 4394.60815916009 4320.961030784861 3963.9984529348644 3941.0882440800888 3801.1208767575076 1.0818076291603718 1.0679226724118207 1.2909221457768603 1.031063511986965 1.147650198879635 1.1997400737978852 1.1561348090852739 1.136759700857184 1.0428498807215774 1.0368226562271228 1.0 11.892209188716421 -8.847393906927417 2.6180413278269334 1.0170815553926453 1.1419143715113105 0.36566681094026177 0.06610492360495221 0.18563136014687945 2.4653648163632136 0.011651317690810434 0.012298456291484548 1.4210393137792365e-09 8.847393906927417 0.12483281611866515 AKS(ph)PNGSSSVNWPPEFRPGEPWK ddPTM_A549_PD325901_60min_R1 1 AKSPNGSSSVNWPPEFRPGEPWK 23 2 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 AKS(0.997)PNGS(0.002)SSVNWPPEFRPGEPWK 70.79899999999999 6.0235e-05 8915100.0 2798.0 2386.8 2793.7 2724.8 2500.1 3097.3 2496.0 3233.5 3498.8 3132.8 3395.8 True False 3082.050900221268 2587.944012475329 2983.297281882833 2893.1047075302104 2324.501600876773 3072.076615706543 2590.9866458636084 3169.0053058683234 3351.7576034047484 2934.9944733530083 2978.1381277497894 1.0348918579374264 0.8689805178481491 1.001732342125092 0.9714474559029845 0.7805217559311499 1.0315426900725158 0.8700021740836099 1.064089431024057 1.125454045322356 0.9855132124347169 1.0 11.540194953155064 -8.281527651231904 23.881395909523096 1.0612610381090846 0.9358300461585806 0.2808009150479015 0.08041262488540266 370.33385968072463 440260.11152101954 0.012909096403183181 0.015618171764166114 5.229646683202607e-09 8.281527651231904 -0.125430991950504 AKS(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_A549_MK2206_60min_R1 9 AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.93)PQPPVEEEDEHFDDT(0.07)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.892)PQPPVEEEDEHFDDT(0.106)VVCLDT(0.001)Y(0.001)NCDLHFK;AKS(0.999)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK 331.44 2.730699999999998e-261 706726800.0 59107.85 67461.71 56187.37 48670.00000000001 88144.61 80780.46 72317.62 74278.52 101078.3 80040.2 81583.38999999998 True False 69083.81003181217 70895.22288673911 64155.58394915074 60594.15218487933 75178.65463345865 89328.59465947023 85456.79545956443 84807.72767842721 78184.22643887719 61959.06322966686 61323.98267598205 1.1265382158368737 1.1560766243987883 1.046174451651812 0.9880987754014782 1.225925834443608 1.456666556238794 1.3935297697654943 1.382945529264242 1.2749371946694936 1.0103561531063694 1.0 15.904163775181253 -6.78511427029276 24.939645138843996 1.2030618269707702 1.082351050536386 0.19987858634391242 0.14603554676810038 434.72976031696095 457952.67861957656 0.026139346440743248 0.04941924161822081 1.6401581628054668e-07 6.78511427029276 -0.12071077643438421 AKS(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_A549_PD325901_60min_R1 5 AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK 252.12 6.267299999999999e-148 623176000.0 39172.43000000001 43368.11 54281.57 38010.29 31017.640000000003 32784.72 34423.4 40108.6 21025.280000000002 35442.43 37817.350000000006 True False 43149.186256381174 47022.89283009529 57965.44376179719 40358.099285668075 28839.067971448938 32517.732110059267 35733.401324207276 39308.602508412 20141.66059898073 33204.58892115707 33166.05569393327 1.301004456320503 1.4178017809545171 1.7477340174761942 1.2168495300769326 0.8695356552972375 0.980452195164329 1.0774088319083306 1.1852058282469302 0.607297436416747 1.0011618272482987 1.0 15.017419827938307 -6.59180510520994 3.5976210018799373 0.8753593901677459 1.4845640973502032 0.5975532023245015 0.18185081463951275 0.11598720264067545 3.0166499122767423 0.03099851624161926 0.06895486367728426 2.559734340283437e-07 6.59180510520994 0.6092047071824573 AKS(ph)PTADAK ddPTM_A549_MK2206_60min_R1 1 AKSPTADAK 9 1 H0Y2V6 H0Y2V6 CEP170 1 AKS(0.5)PT(0.5)ADAK 45.077 0.014152000000000001 4619500.0 3941.3 3477.8 3139.2 2452.4 2888.7 3129.5 2726.9 2563.3 3813.6 4920.7 4923.7 True False 4606.495084466474 3654.8051651151623 3584.3857637966294 3053.238110092419 2463.7760566377515 3460.661612806028 3222.3424324346724 2926.65562477702 2949.8256890678017 3809.1104524254297 3701.0094027930522 1.2446591140757641 0.9875157740363965 0.9684886942172019 0.8249744266491791 0.6657038090144829 0.9350588545369163 0.870665832408547 0.7907722748740794 0.7970327464830669 1.0292085314754393 1.0 11.853703085619236 -5.18365573392058 1.4348985168769868 0.8746832226279891 1.439697750613985 0.5485913954092871 0.09899622443698203 0.8983659151973257 1.428699468387751 0.015208593263989038 0.7626339463134297 6.551553111673953e-06 5.18365573392058 0.5650145279859958 AKS(ph)PTADAK ddPTM_A549_PD325901_60min_R1 1 AKSPTADAK 9 1 H0Y2V6 H0Y2V6 CEP170 1 AKS(0.817)PT(0.183)ADAK 65.179 0.0016558 6723800.0 4673.0 5001.1 5585.1 4598.6 4854.2 4518.2 3818.7 4936.6 4437.7 5323.0 6390.0 True False 5147.399519919219 5422.560248361974 5964.138471934642 4882.645077821648 4513.25773808089 4481.405277204433 3964.0227181728196 4838.135640312216 4251.198901517447 4986.904871571135 5604.070509547431 0.9185108415659295 0.9676109961721171 1.0642511477637153 0.8712676026297813 0.8053534891097164 0.7996696810951329 0.7073470455840041 0.8633252618912767 0.7585912586707909 0.8898718999118844 1.0 12.452259392310632 -6.398822348778324 7.426722999549086 0.8561304624327328 0.9814119432162159 0.38527863596747525 0.07996626448547452 0.31658036264142614 17.84499274294397 0.01513974580955339 0.03531288526056159 3.9918815970199476e-07 6.398822348778324 0.1252814807834831 AKS(ph)PTPDGS(ph)ER ddPTM_A549_PD325901_60min_R1 2 AKSPTPDGSER 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 2 AKS(0.998)PT(0.018)PDGS(0.984)ER;AKS(0.895)PT(0.112)PDGS(0.993)ER 141.87 9.624700000000002e-11 180311000.0 31490.0 30566.0 31822.0 29718.0 34929.0 32253.0 33672.0 34017.0 34362.0 35171.0 37103.0 True False 34686.84161828722 33141.90409138633 33981.63228123118 31553.613365525078 32475.707538508406 31990.342261448055 34953.406386025395 33338.504249179736 32917.884637073825 32950.29705767959 32539.566215295516 1.0659896751168845 1.0185109374877799 1.0443173106978239 0.9696998772741174 0.99803750681971 0.983121349860242 1.074181694825275 1.0245528175943746 1.0116264125733943 1.0126225051577673 1.0 14.989907398131699 -5.00050795948947 1.2321416715138254 1.0086005253307555 1.1200203362133248 0.23638551483801007 0.027042787404359444 2.5919024705045826 2.1587672147467676 0.00385889716819574 0.42656863807011014 9.988310637905159e-06 5.00050795948947 0.11141981088256925 AKS(ph)PTPDGSER ddPTM_A549_MK2206_60min_R1 2 AKSPTPDGSER 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 AKS(0.557)PT(0.438)PDGS(0.005)ER;AKS(0.993)PT(0.007)PDGSER 54.143 0.016188 10580200.0 1196.77 1095.6200000000001 1243.22 986.8800000000001 1311.92 1047.82 749.34 1001.92 1319.47 1493.3999999999999 2006.79 True False 1398.7555177826966 1151.3823782286138 1419.5272901590376 1228.6656443027268 1118.9383058899148 1158.6996169133756 885.4853783859318 1143.9452282513137 1020.6121517606185 1156.0399027886551 1508.4486584136052 0.9272808258875248 0.7632890730530342 0.9410511138323503 0.8145226802713201 0.7417808353296372 0.7681399101325389 0.587017246789939 0.7583587428519908 0.6765972087071023 0.7663766985642263 1.0 10.558849878387274 -4.453958123858772 16.634986449461042 0.8155475094625565 0.803378641874556 0.0 0.1167362208425601 0.0 0.0 0.01888808545694487 0.0 3.515943408080995e-05 4.453958123858772 -0.01216886758800051 AKS(ph)PTPDGSER ddPTM_A549_PD325901_60min_R1 2 AKSPTPDGSER 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 AKS(0.832)PT(0.167)PDGS(0.002)ER;AKS(0.624)PT(0.376)PDGSER 136.7 2.9679e-08 143574000.0 4830.0 4975.1 4317.1 4320.700000000001 5642.4 5946.7 4771.9 4752.1 5352.7 5671.7 5655.3 True False 5320.338044341929 5394.369137114969 4610.084366831219 4587.57982597834 5246.097289223273 5898.2720468221 4953.4972657838725 4657.3156375496665 5127.744633515659 5313.587894061621 4959.733951900407 1.0727063378678507 1.087632762045235 0.9295023506381398 0.9249649014380156 1.057737640788805 1.1892315402446285 0.9987425361567741 0.9390252950493717 1.0338749383020587 1.0713453474708314 1.0 12.276047018869345 AKS(ph)PTPESSTIAS(ph)YVTLRK ddPTM_A549_MK2206_60min_R1 1 AKSPTPESSTIASYVTLRK 19 2 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;H0YGJ6 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 2 AKS(0.81)PT(0.19)PES(0.045)S(0.034)T(0.031)IAS(0.51)YVT(0.38)LRK 62.236999999999995 0.0008144000000000001 5037800.0 1271.8 931.64 1208.4 946.49 1441.9 1211.0 1135.5 1155.7 2172.2 1683.0 2003.9 True False 1486.4487474753157 979.0564966438236 1379.7692905746205 1178.3800924895509 1229.7984200733797 1339.1472162032592 1341.8056518499288 1319.5240141828124 1680.2001682906127 1302.8091311057367 1506.2763251735469 0.9868366929979154 0.6499846543966764 0.9160133950957832 0.7823133596379023 0.8164494120504001 0.8890448544021086 0.890809760085243 0.8760172301259415 1.1154660935781668 0.864920406257884 1.0 10.556770740189213 -8.669147688283791 5.61711036560577 1.054289911104488 0.8435109274883468 0.22540888627309852 0.10223462538221614 0.10947006420525708 5.3891736776580235 0.01418578493342703 0.016050501379500204 2.1421620032614985e-09 8.669147688283791 -0.21077898361614134 AKS(ph)PTPESSTIAS(ph)YVTLRK ddPTM_A549_PD325901_60min_R1 2 AKSPTPESSTIASYVTLRK 19 2 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;H0YGJ6 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 2 AKS(0.995)PT(0.005)PES(0.001)S(0.006)T(0.005)IAS(0.719)YVT(0.269)LRK;AKS(0.845)PT(0.214)PES(0.084)S(0.08)T(0.077)IAS(0.395)Y(0.009)VT(0.296)LRK 110.31 2.0529e-10 28351000.0 2900.8 2821.2 3116.8 3090.7 3626.2 2987.0 3125.4 3036.3999999999996 4335.0 3635.6 3587.3999999999996 True False 3195.2870805439047 3058.95242500226 3328.324790840969 3281.605519511016 3371.5082217108734 2962.6748623366952 3244.338807284504 2975.836619990282 4152.815025368579 3406.047595544622 3146.172542402261 1.01561088512461 0.9722773890419233 1.057896458628307 1.0430469007288918 1.07162216193539 0.9416759006085991 1.0312018058638603 0.9458593195013014 1.3199578120396713 1.0826003817781504 1.0 11.619382077870283 -8.728509310656358 24.999981360667885 1.1510913535737943 1.0118431037075286 0.3074022523630978 0.08198417442984177 206.32511257831166 156638.6718030915 0.01973634682275624 0.022378244155170975 1.868489619065016e-09 8.728509310656358 -0.13924824986626572 AKS(ph)PTPESSTIASYVTLR ddPTM_A549_MK2206_60min_R1 2 AKSPTPESSTIASYVTLR 18 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;H0YGJ6 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 AKS(0.659)PT(0.339)PES(0.002)S(0.001)TIASYVTLR;AKS(0.489)PT(0.489)PES(0.019)S(0.002)TIASYVTLR 100.92 2.1794e-09 73867000.0 3363.89 3541.92 3960.03 3720.0 5151.0 3735.91 3192.2000000000003 3921.1000000000004 5396.8 5106.9 5553.1 True False 3931.6323927856124 3722.1885992365005 4521.621800524837 4631.4001669971485 4393.2947234884405 4131.241516503647 3772.1814194939143 4476.927932865126 4174.433416918691 3953.24774310391 4174.11201223675 0.9419086936957396 0.8917318434015667 1.08325358477907 1.1095533980448586 1.0525100214390841 0.9897294333243994 0.903708718988723 1.072546189402835 1.0000769995345116 0.9470871245224474 1.0 12.027253600380295 -5.743545967099983 24.999953626262503 1.0127223004870367 0.916820228070656 0.3025997153347585 0.058631462052522974 227.69813503874593 318125.488836766 0.007701432279367722 0.02970022991370505 1.8049036903126317e-06 5.743545967099983 -0.09590207241638071 AKS(ph)PTPESSTIASYVTLR ddPTM_A549_PD325901_60min_R1 5 AKSPTPESSTIASYVTLR 18 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;H0YGJ6 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 AKS(0.785)PT(0.215)PESSTIASYVTLR;AKS(0.951)PT(0.039)PES(0.003)S(0.003)T(0.003)IASYVTLR;AKS(0.732)PT(0.257)PES(0.009)S(0.002)TIASYVTLR;AKS(0.541)PT(0.449)PES(0.005)S(0.005)TIASYVTLR;AKS(0.663)PT(0.335)PES(0.002)STIASYVTLR 101.3 2.1207e-09 304692700.0 10327.09 10998.7 10600.8 10792.2 13690.9 11922.3 11219.6 11121.900000000001 11269.7 12253.599999999999 12711.3 True False 11375.488574398163 11925.599048941009 11320.234035788935 11458.809683135469 12729.298415040925 11825.20874162596 11646.568017600703 10900.06497953824 10796.073700437433 11479.905604787538 11147.890683569683 1.0204162291583936 1.0697628266589976 1.0154597275046175 1.0278903882708532 1.1418571258329613 1.060757508059757 1.04473288698157 0.977769273931193 0.968440937113711 1.0297827571728162 1.0 13.444483140077871 -8.190880996366534 4.3661663285483945 0.9840947536892961 1.0569732717494351 0.39072913385458186 0.035626825686633376 0.1407780886482654 5.2307217027405155 0.00550860115395247 0.0071266116054185214 6.443458023816185e-09 8.190880996366534 0.07287851806013901 AKS(ph)QVFK ddPTM_A549_PD325901_60min_R1 1 AKSQVFK 7 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7;Q5HYK7-3;Q5HYK7-5;Q5HYK7-4 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 AKS(1)QVFK 46.158 0.018001 3293200.0 2961.0 3459.1 3284.0 3214.8 3513.2 3860.9 3244.8 3716.3 4618.5 4336.1 4077.0 True False 3261.598540227008 3750.6104967125075 3506.8719882962478 3413.3708946594675 3266.4449518820365 3829.458110477317 3368.2826396226897 3642.1754811190513 4424.400506266385 4062.317905996545 3575.554846232373 0.9121936819578683 1.0489590169941299 0.9807909930374868 0.9546408995113579 0.9135491112166686 1.0710108710855006 0.9420307573164232 1.0186322508678276 1.237402500182162 1.1361363706326817 1.0 11.803951417964822 -8.538020532087158 24.535195254657378 1.112944154934694 0.9785407001011533 0.4687086545835546 0.06930085020586674 172.5554798721287 279601.3118316283 0.015622103665547204 0.01771710620193412 2.8972066135804113e-09 8.538020532087158 -0.13440345483354055 AKS(ph)VDEIAK ddPTM_A549_MK2206_60min_R1 4 AKSVDEIAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK 144.57 2.7901999999999998e-05 114169800.0 10187.2 16393.5 12717.1 9359.5 15712.000000000002 11953.7 9895.5 12173.8 16697.7 15156.5 15985.199999999999 True False 11906.55030687257 17227.859127700103 14520.57600559956 11652.577920163923 13400.785613560538 13218.632599776123 11693.384260573288 13899.473430698901 12915.697610747708 11732.636123353586 12015.633670923793 0.9909215471244609 1.4337869811551587 1.2084735939260023 0.9697847187503381 1.1152791422052608 1.1001194744945848 0.973180822653548 1.1567823896240899 1.0749077380747674 0.9764475552999737 1.0 13.552625113726165 -6.158401006777731 6.305930403204134 1.0472858400695628 1.2372508856630409 0.295309887276769 0.1122134730268272 0.18108961247064917 9.443178708256859 0.01382721308176639 0.03713646463521134 6.943828615267417e-07 6.158401006777731 0.18996504559347804 AKS(ph)VDEIAK ddPTM_A549_PD325901_60min_R1 4 AKSVDEIAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK 127.02 1.493e-05 244799000.0 36575.3 38789.700000000004 37870.9 35281.2 46149.5 42681.3 41520.0 41338.0 36607.799999999996 38310.4 44337.7 True False 40288.39753068724 42058.644151463996 40441.047010221795 37460.43959458118 42908.118327132 42333.717643739925 43100.06632061579 40513.48116096635 35069.30147305372 35891.47480590622 38884.44397983742 1.0361057895434431 1.0816316204308458 1.0400315105750646 0.9633785586340227 1.1034777390511474 1.0887057473598192 1.1084141088133928 1.0418943159370782 0.9018851212386642 0.9230291379379596 1.0 15.246905488958557 -8.636636599223543 6.650633388816186 0.9538463544412176 1.0603451875520766 0.5750956896978032 0.04437512885449875 0.13799213973622818 7.609440101672365 0.008707421984527767 0.009870319389819495 2.308678193072472e-09 8.636636599223543 0.10649883311085906 AKS(ph)VEDDAEGHLIYHVGDWLQER ddPTM_A549_MK2206_60min_R1 1 AKSVEDDAEGHLIYHVGDWLQER 23 1 B1AVT0;P49760-3;P49760 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 AKS(1)VEDDAEGHLIYHVGDWLQER 43.93600000000001 0.019561000000000002 1291900.0 492.95 438.32 503.99 252.33 873.72 437.56 431.81 554.84 769.26 517.51 594.57 True False 576.1479085296096 460.6286157839088 575.4633604408334 314.1508613275241 745.1969454098856 483.8623087711793 510.2642875608258 633.4902691262365 595.0238382557947 400.6041315736953 446.9218597027974 1.289146852008419 1.0306692451566957 1.287615156760325 0.702921225505582 1.6673987392459184 1.0826552746669122 1.1417304311320797 1.4174519669892784 1.33138226590994 0.8963628045405895 1.0 8.8038788008839 -4.916764724480167 17.471110621803742 1.175390764158374 4.527254440943909 0.017306158580722597 0.2522834501731615 426.07316879796457 91742.3392427991 0.030650982044942442 1433.0153150865867 1.2112541429670461e-05 4.916764724480167 3.351863676785535 AKS(ph)VEDDAEGHLIYHVGDWLQER ddPTM_A549_PD325901_60min_R1 3 AKSVEDDAEGHLIYHVGDWLQER 23 1 B1AVT0;P49760-3;P49760 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 AKS(0.996)VEDDAEGHLIY(0.004)HVGDWLQER;AKS(1)VEDDAEGHLIYHVGDWLQER;AKS(1)VEDDAEGHLIYHVGDWLQER 106.81 1.1113e-10 8169200.0 1794.53 1656.17 885.37 1437.6 1204.31 1433.34 1536.24 1126.7 1438.0600000000002 1050.53 1781.6100000000001 True False 1976.709364536837 1795.7412582291213 945.4565323623162 1526.3972869735135 1119.7234202439527 1421.6673542623623 1594.7024538627836 1104.2270846209492 1377.6233391883598 984.1993565154286 1562.4832645563074 1.2651075434706534 1.1492867149134243 0.6050986617324148 0.9769047269808415 0.7166306645606962 0.9098768521313205 1.020620502015825 0.70671290353597 0.8816883805661485 0.6298943347690242 1.0 10.60962502210342 -5.541306581252393 24.90168487055379 0.8994040796622663 1.2361524692044605 0.4271335132436648 0.1542926452309812 119.13605937670327 160989.51784564607 0.017650037512443102 0.06838158351316674 2.875367891324611e-06 5.541306581252393 0.3367483895421942 AKS(ph)VLK ddPTM_A549_MK2206_60min_R1 2 AKSVLK 6 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 AKS(1)VLK;AKS(1)VLK 78.334 0.012295 226960000.0 16603.8 31757.0 20072.9 12096.1 28875.0 18315.2 13713.099999999999 23741.0 19897.1 20381.6 21295.8 True False 19406.115516064354 33373.2956548859 22919.539053935212 15059.645043014556 24627.52575048121 20253.302307354195 16204.592764758478 27106.359453763198 15390.438619139652 15777.382404364034 16007.465125820065 1.2123165887622183 2.084858245360455 1.4318031539525868 0.9407888709826596 1.5385025397154841 1.2652410702232666 1.0123147317447811 1.6933573954842231 0.961453827834043 0.9856265361412591 1.0 13.966457246432297 -6.859542298282235 0.28361277582120054 0.933282702801842 1.7835523863652936 0.22371931797275135 0.31052661174954044 3.0235307704094776 0.36779880194164993 0.1781714230583412 0.8462678998773558 1.381839814513748e-07 6.859542298282235 0.8502696835634516 AKS(ph)VLK ddPTM_A549_PD325901_60min_R1 2 AKSVLK 6 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 AKS(1)VLK;AKS(1)VLK 75.378 0.012779 412600000.0 33395.0 30437.0 25879.0 24868.0 34651.0 28456.0 27211.0 26093.0 22220.0 26955.0 34985.0 True False 36785.23581590035 33002.03280866078 27635.304563068996 26404.03988067425 32217.233299460477 28224.263770556718 28246.52949543056 25572.554645437493 21286.17067213143 25253.056699830908 30682.06678818731 1.1989164898781453 1.0756130946617541 0.9006989246796332 0.8605691416733336 1.0500346512466432 0.9198944766466367 0.9206201684661466 0.833469101738707 0.6937658671783699 0.823055919738543 1.0 14.905108047678393 -2.0000000000123963 0.5195019458578117 0.8627143268069903 13.627714349117865 0.5489916284443812 0.08942956672245082 75.26742208782834 0.6796956236757447 0.022273814819415205 1064.6955985243815 0.009999999999714565 2.0000000000123963 12.765000022310874 AKS(ph)VLKK ddPTM_A549_MK2206_60min_R1 1 AKSVLKK 7 2 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 AKS(1)VLKK 52.57899999999999 0.039026 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AKS(ph)VLKK ddPTM_A549_PD325901_60min_R1 2 AKSVLKK 7 2 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 AKS(1)VLKK;AKS(1)VLKK 63.283 0.01917 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AKSEDS(ph)DVELS(ph)D ddPTM_A549_PD325901_60min_R1 1 AKSEDSDVELSD 12 1 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 2 AKS(0.174)EDS(0.826)DVELS(1)D 51.03 0.031376999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AKSEENQGDNS(ph)SENGNGKEK ddPTM_A549_PD325901_60min_R1 1 AKSEENQGDNSSENGNGKEK 20 2 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 AKSEENQGDNS(0.5)S(0.5)ENGNGKEK 76.061 6.9968e-05 9435800.0 579.89 777.78 871.21 890.87 911.05 955.91 1033.7 1046.3 1005.9 975.55 916.4 True False 638.7600059075446 843.3262502191476 930.3355496113192 945.8970165874327 847.0609909518762 948.1253858909498 1073.038019162344 1025.430725693529 963.6255211114767 913.953606511595 803.6886095382265 0.794785440936578 1.0493196496883235 1.1575821015378829 1.1769446591148214 1.0539666493949318 1.1797173365884979 1.3351415043431771 1.275905510571698 1.1990035813312632 1.1371986558783298 1.0 9.650492824893588 -5.291236311046696 2.574625811058122 1.1355550121321223 0.735712047682936 0.5664890943958711 0.09199185260512559 0.33794321809239886 2.974433670283668 0.016159070559299597 0.28291801984170567 5.114034917336786e-06 5.291236311046696 -0.3998429644491863 AKSEENQGDNSS(ph)ENGNGKEK ddPTM_A549_PD325901_60min_R1 1 AKSEENQGDNSSENGNGKEK 20 2 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 AKSEENQGDNS(0.175)S(0.825)ENGNGKEK 48.489 0.0033663000000000005 10099000.0 828.1 628.75 734.78 708.76 605.22 1030.1 846.92 862.54 1003.0 678.24 882.35 True False 912.1681023850008 681.7369690983172 784.6465893910827 752.5384954892512 562.7114350956525 1021.7112071285661 879.1500040524068 845.3359630504601 960.8473980264558 635.4158106508374 773.8265436774923 1.1787759283237578 0.8809945519036689 1.0139825207625597 0.9724898966542646 0.7271803218605716 1.320336211617968 1.1361073243551207 1.0924101401757689 1.2416831728983806 0.8211346791376799 1.0 9.595866406505056 -7.268916548230639 24.99976133587544 1.1296953200768736 0.9548742558418004 0.1661713526401868 0.15770683740172173 588.5801657273058 1967903.4533262635 0.02043251610896023 0.033051422889571115 5.3837322357678586e-08 7.268916548230639 -0.17482106423507315 AKSELTLTPDPAPPMAHS(ph)PLHR ddPTM_A549_MK2206_60min_R1 1 AKSELTLTPDPAPPMAHSPLHR 22 1 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5;Q9NRA0-3 E9PCV4 SPHK2 Sphingosine kinase 2 1 AKSELTLT(0.001)PDPAPPMAHS(0.999)PLHR 50.144 0.0046982 3692900.0 734.24 774.73 852.21 739.58 1013.3 1055.4 669.88 767.74 1070.5 1084.2 1243.3 True False 858.1617615554933 814.1604478606221 973.0661925857315 920.7771332010084 864.2449123103931 1167.0817274821795 791.5885249328308 876.5694961051419 828.0334592372257 839.2784669903978 934.5542966656376 0.9182577883567574 0.871175116058463 1.0412088372580375 0.9852580384962284 0.9247669347772529 1.2488110446296894 0.8470225087585717 0.9379545942195359 0.8860196375871752 0.8980521195877318 1.0 9.868134675312476 -5.725848052505262 24.988797179260512 0.9641205907548026 0.8947164009339985 0.07507024993782752 0.1027989769944309 402.11151748150394 282318.4923988514 0.013600509846651279 0.05267053574355647 1.879974452242234e-06 5.725848052505262 -0.0694041898208041 AKSELTLTPDPAPPMAHS(ph)PLHR ddPTM_A549_PD325901_60min_R1 1 AKSELTLTPDPAPPMAHSPLHR 22 1 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5;Q9NRA0-3 E9PCV4 SPHK2 Sphingosine kinase 2 1 AKSELTLTPDPAPPMAHS(1)PLHR 66.282 0.00038992 2919400.0 1208.3 1209.8 1035.9 1112.0 1469.5 1538.1 1134.4 1119.4 1677.4 1047.8 1447.3 True False 1330.9657264965529 1311.754091793469 1106.2024033727412 1180.6857144647645 1366.2873894997874 1525.5742235554292 1177.5702127674992 1097.0726888476886 1606.9047113156296 981.641729181333 1269.2912751906092 1.0485896756019866 1.0334539576792434 0.87151186256017 0.9301928860162229 1.0764175380427257 1.2019102733738827 0.9277383653256923 0.8643190970354235 1.2659857849210545 0.7733778277440062 1.0 10.309807459478176 -8.75930247076129 24.99934579514506 1.1256043916524674 0.996787541700449 0.0 0.1520872081901486 76.28014964192651 892386.6329723588 0.02271778037831035 0.025148310347229277 1.7405941887942864e-09 8.75930247076129 -0.12881684995201836 AKSLS(ph)AMDVEK ddPTM_A549_PD325901_60min_R1 2 AKSLSAMDVEK 11 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AKS(0.333)LS(0.667)AMDVEK;AKS(0.103)LS(0.897)AMDVEK 79.337 0.00022124 75360000.0 13954.5 13885.3 13983.2 14633.0 17783.3 15924.3 15166.6 15822.4 16700.4 16102.6 17510.9 True False 15371.15056724006 15055.462961464584 14932.18403981245 15536.847176045789 16534.262357054486 15794.617780484836 15743.773262481976 15506.809819567325 15998.540265205404 15085.879087913088 15357.170310740867 1.000910340656274 0.9803539751678558 0.972326524852617 1.0116998679880014 1.0766477171572653 1.0284849005964345 1.0251741006916306 1.0097439505975785 1.041763550282174 0.9823345566052597 1.0 13.906624791263154 -6.450340823184338 6.301336406248833 1.024460144646664 0.9849060334186408 0.3425281012871083 0.023497462938456844 0.1943695215490631 13.56012848199766 0.003228074184907092 0.007531693730458186 3.545350500057783e-07 6.450340823184338 -0.0395541112280231 AKSPT(ph)PDGSER ddPTM_A549_PD325901_60min_R1 1 AKSPTPDGSER 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 AKS(0.397)PT(0.602)PDGS(0.001)ER 110.8 0.00029546 20093000.0 2090.9 1924.2 2363.8 1933.0 2823.3 2103.3 2030.7 2221.4 2341.3 2166.6 2732.8 True False 2303.166628760773 2086.3590869804866 2524.221682684126 2052.3970198384804 2625.0011478562437 2086.171422146893 2107.9793997416787 2177.092434345411 2242.9033030900696 2029.8005062457319 2396.682924646514 0.9609809479076029 0.8705194439886966 1.05321469800033 0.8563489974966914 1.0952642591399129 0.8704411420858191 0.8795403756016594 0.9083773293317512 0.935836476333587 0.8469207525835344 1.0 11.226823341209403 -10.491603013634052 0.9563879249364398 0.9976790513696138 0.9367287201155844 0.0 0.08570735676296186 0.971300335793201 1.6734520701958473 0.03692248837229223 0.012307741426243963 3.224014499924079e-11 10.491603013634052 -0.06095033125402938 AKSPT(ph)PESSTIASYVTLR ddPTM_A549_MK2206_60min_R1 2 AKSPTPESSTIASYVTLR 18 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;H0YGJ6 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 AKS(0.219)PT(0.761)PES(0.02)STIASYVTLR;AKS(0.06)PT(0.699)PES(0.231)S(0.01)TIASYVTLR 213.05 6.4573e-56 107906000.0 5771.700000000001 6224.8 5986.2 5131.4 7794.5 6528.9 5734.4 5970.7 8789.3 9565.4 8019.4 True False 6745.821855483003 6541.615731729505 6835.133173814791 6388.593230357298 6647.93937531171 7219.783864466929 6776.266252724112 6817.065009501875 6798.537583627973 7404.569496541181 6027.96165581952 1.1190883818861797 1.0852119016739419 1.1339045541565465 1.0598264546340663 1.1028503090914075 1.1977156253966543 1.124138911232483 1.1309071621118454 1.1278335815332405 1.2283703711672842 1.0 12.557454524568135 -10.634842773699276 0.8327514538911648 0.9972632137323371 1.1201734175562021 0.0 0.07471460936042833 0.3301282914560215 0.3943073754677761 0.02553859896168309 0.006318039029345287 2.3182337611350007e-11 10.634842773699276 0.12291020382386508 AKT(ph)PEPGAQQSGFPTLSR ddPTM_A549_MK2206_60min_R1 2 AKTPEPGAQQSGFPTLSR 18 1 Q9H9D4 Q9H9D4 ZNF408 Zinc finger protein 408 1 AKT(1)PEPGAQQSGFPTLSR;AKT(1)PEPGAQQSGFPTLSR 166.65 4.0355e-24 38583000.0 8830.1 8995.5 10526.2 9650.599999999999 12474.7 9358.5 10076.400000000001 10203.7 13975.900000000001 13121.2 13611.900000000001 True False 10320.405004782031 9453.332527112956 12018.97344128317 12014.997433231896 10639.688155135162 10348.810258330468 11907.151448965764 11650.105722520682 10810.380964926235 10157.111806930832 10231.6895606716 1.008670654400172 0.9239268325193837 1.1746812068538026 1.1742926094449684 1.039875974739482 1.0114468580154203 1.163752220819353 1.1386297105124423 1.056558733611211 0.9927111008110108 1.0 13.320756776786846 -9.837120918110376 1.1184097235397947 1.009492456179101 1.0786146193673982 0.13478919795236466 0.07688769337191699 0.7097564998176775 1.805920408606749 0.02454348583404017 0.01526496214184781 1.455053901904297e-10 9.837120918110376 0.06912216318829723 AKT(ph)PEPGAQQSGFPTLSR ddPTM_A549_PD325901_60min_R1 2 AKTPEPGAQQSGFPTLSR 18 1 Q9H9D4 Q9H9D4 ZNF408 Zinc finger protein 408 1 AKT(1)PEPGAQQSGFPTLSR;AKT(0.999)PEPGAQQSGFPTLSR 142.25 4.6946e-17 39308000.0 11305.4 11777.3 11620.900000000001 11840.8 13690.5 13381.2 12646.9 13500.2 14718.599999999999 13327.0 15105.8 True False 12453.1158854044 12769.81440343795 12409.56415614856 12572.17932359208 12728.926509661009 13272.227943722713 13128.184700149219 13230.92792029798 14100.028427310253 12485.530945599949 13247.882363555798 0.9400080362777257 0.9639136318546285 0.936720587909702 0.948995392514766 0.9608272598100351 1.0018376959802942 0.99096477005745 0.9987202148394329 1.064323190708476 0.9424548469683701 1.0 13.693474146941643 -7.579314299164976 1.0401461593984112 1.0288014567436026 0.9466771688309837 0.24132507568118078 0.031991467988900686 0.22573444804950102 0.4906327838778647 0.004563423360116743 0.008522703385700466 2.634424161506348e-08 7.579314299164976 -0.08212428791261883 AKT(ph)PTPEPFDSETR ddPTM_A549_MK2206_60min_R1 2 AKTPTPEPFDSETR 14 1 Q9NSY0;H0YCB1;Q9NSY0-2;Q9NSY0-4 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 1 AKT(0.879)PT(0.112)PEPFDS(0.008)ETR;AKT(0.789)PT(0.208)PEPFDS(0.003)ETR 90.654 2.6953e-05 14141000.0 2245.7 3016.5 2448.2 2443.8 3534.0 2919.4 2759.2 3097.6 3513.1 3122.3 4207.9 True False 2624.719257906366 3170.0269654867698 2795.391573307503 3042.531109706352 3014.1532814614907 3228.3289702591173 3260.510924336697 3536.694286002147 2717.38845926791 2416.970261468474 3162.962297868041 0.8298294480700982 1.0022335604896369 0.8837890907494236 0.9619245577973331 0.9529526429996168 1.0206662825020507 1.030840907125073 1.1181588501342605 0.8591276794856313 0.7641476672351123 1.0 11.627060643867699 -6.29376947764165 21.313709410617793 0.9614383509038454 0.9149790089607054 0.06626362752444281 0.09519020528089094 264.7089079431767 174509.85817970676 0.012084150592978234 0.02808681182162426 5.08429243842553e-07 6.29376947764165 -0.04645934194314005 AKT(ph)PVTLK ddPTM_A549_MK2206_60min_R1 6 AKTPVTLK 8 1 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 AKT(1)PVTLK;AKT(0.892)PVT(0.108)LK;AKT(0.988)PVT(0.012)LK;AKT(0.999)PVT(0.001)LK;AKT(0.984)PVT(0.016)LK;AKT(0.842)PVT(0.158)LK 103.22 0.0014676 4314074700.0 22852.2 31353.100000000002 24636.3 33081.9 32443.3 22747.5 22483.4 21590.6 50991.1 36240.6 34451.299999999996 True False 26709.092677351346 32948.838870082305 28130.097793266734 41186.9669851029 27670.933547379635 25154.625351431554 26568.34275015647 24651.13366843941 39441.697266054434 28053.823289810196 25896.091402490867 1.0313947484284165 1.272347952359832 1.0862680918156238 1.5904704051647445 1.0685370667450629 0.9713676462005384 1.0259595680760125 0.9519248787509411 1.5230753032583386 1.083322685797741 1.0 14.66044674233489 -13.472070601119496 7.387273419979787 0.7362661345037842 1.196720712604227 0.0 0.2163027436673823 123755549.0644243 0.0 0.0 0.03319907505071958 3.372324819753391e-14 13.472070601119496 0.46045457810044277 AKT(ph)PVTLK ddPTM_A549_PD325901_60min_R1 6 AKTPVTLK 8 1 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 AKT(0.992)PVT(0.008)LK;AKT(0.984)PVT(0.016)LK;AKT(0.966)PVT(0.034)LK;AKT(0.94)PVT(0.06)LK;AKT(0.983)PVT(0.017)LK;AKT(0.991)PVT(0.009)LK 100.72 0.00095321 7235680000.0 48323.4 61358.59999999999 51617.9 73922.2 59938.5 55312.299999999996 54644.4 57506.799999999996 88114.6 61178.4 60508.5 True False 53229.15599419311 66529.5045600254 55121.00109764826 78488.20640450294 55728.62653659956 54861.85496753461 56723.922544563065 56359.78176078812 84411.44978877548 57315.58538322893 53066.33809498448 1.0030681954899017 1.2537044565039126 1.0387187636536386 1.4790582735144708 1.050169062671138 1.0338353264424671 1.0689247568398597 1.062062764909624 1.590677872622109 1.080074251225676 1.0 15.695509376867243 AKT(ph)QTPPVSPAPQPTEER ddPTM_A549_MK2206_60min_R1 1 AKTQTPPVSPAPQPTEER 18 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 AKT(0.5)QT(0.5)PPVSPAPQPTEER 45.395 0.014756 1433300.0 519.94 571.94 546.86 549.16 804.59 685.78 419.41 568.02 974.38 887.31 828.08 True False 607.6931606874633 601.049303046744 624.4129710721925 683.704224652729 686.2358768339284 758.3487844160782 495.6113680690254 648.5385744882934 753.6844857651267 686.866054736441 622.4448821546539 0.9763003570434605 0.9656265482754922 1.0031618685830075 1.098417296461688 1.1024845677234194 1.2183388540218687 0.7962333409400333 1.041921289871183 1.2108453412873668 1.1034969913461044 1.0 9.281802281151855 -6.126721308117087 3.7115635574204497 1.0843668075511619 0.9730340262452799 0.11686418567472612 0.10743905844108234 0.3834171251021049 9.381402913100082 0.016751172911837 0.04864718037541719 7.469279170923133e-07 6.126721308117087 -0.11133278130588198 AKTQT(ph)PPVS(ph)PAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 3 AKT(0.198)QT(0.805)PPVS(0.995)PAPQPT(0.762)EERLPS(0.123)S(0.115)PVY(0.001)EDAASFK 64.072 0.00037810000000000003 43647000.0 1989.4 2220.8 2240.1 1585.1 2262.1 1633.0 1504.8 2036.1 3296.2 3341.1 2980.1 True False 2325.1620838397503 2333.8292341962606 2557.7798641312543 1973.4495711578438 1929.3480865857503 1805.8029761023301 1778.2026815532988 2324.7234102947327 2549.6159629497843 2586.3431895052727 2240.0589234241656 1.0379914829586248 1.0418606447319507 1.1418359746632998 0.8809810985423627 0.8612934536724324 0.8061408372874275 0.7938196013322404 1.0377956517059599 1.138191471790585 1.1545871237850187 1.0 11.12932096668326 -11.823207160959997 22.925382149648513 0.9999992006294512 1.013533143358266 0.0 0.13139817175610424 308.79740169396086 659598.7193911528 0.34962965470945023 0.019814097993895226 1.5024251297277786e-12 11.823207160959997 0.013533942728814696 AKTQT(ph)PPVS(ph)PAPQPTEER ddPTM_A549_MK2206_60min_R1 3 AKTQTPPVSPAPQPTEER 18 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 AKT(0.042)QT(0.958)PPVS(0.983)PAPQPT(0.017)EER;AKT(0.032)QT(0.971)PPVS(0.995)PAPQPT(0.003)EER;AKT(0.071)QT(0.929)PPVS(0.99)PAPQPT(0.01)EER 94.389 1.8516e-06 358406700.0 5703.610000000001 6008.4800000000005 4796.5599999999995 4184.62 6643.7 5102.92 4604.64 4971.360000000001 7613.210000000001 8273.630000000001 7597.98 True False 6666.239928123677 6314.285967706926 5476.78433333218 5209.852087854732 5666.420530856171 5642.907607355847 5441.2434845744165 5676.065504151477 5888.830090798168 6404.611236714409 5711.191872419837 1.167223948527435 1.1055986401366618 0.9589564587700784 0.9122180105721635 0.992160770892697 0.988043780249488 0.9527334409566872 0.993849555565102 1.0311035283608965 1.1214141250696188 1.0 12.479576138655514 -5.603116336584757 4.413344277066259 0.9967103770337801 1.1547090497883647 0.5538676573426704 0.0502089888733838 0.08427080521239483 2.967060135646473 0.0054273689911488844 0.02393090907433036 2.493926577159546e-06 5.603116336584757 0.15799867275458468 AKTQT(ph)PPVS(ph)PAPQPTEER ddPTM_A549_PD325901_60min_R1 2 AKTQTPPVSPAPQPTEER 18 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 AKT(0.035)QT(0.965)PPVS(0.999)PAPQPT(0.001)EER;AKT(0.116)QT(0.884)PPVS(0.981)PAPQPT(0.019)EER 114.62 3.0948000000000005e-10 369180000.0 12192.4 11739.400000000001 12016.5 12788.099999999999 15263.3 12038.5 13204.1 15056.7 15510.6 16812.7 19088.6 True False 13430.163472429518 12728.72043742789 12832.011951084613 13577.991893117682 14191.25846352644 11940.462447351953 13706.589251060768 14756.382306747346 14858.743421564444 15751.143252726666 16740.823212605184 0.8022403260502226 0.7603401741823342 0.7665102120798104 0.8110707413058389 0.847703740927207 0.7132541987756762 0.8187524040478633 0.8814609723395422 0.8875754335889762 0.9408822405380084 1.0 14.031082852213215 -9.219284512426192 0.44722996396089587 1.0011208650550494 0.7737444423828507 0.7553990113451123 0.039547345761921135 0.2670582026058208 0.1301231930212592 0.022507390205126827 0.014373031178575864 6.03553103702283e-10 9.219284512426192 -0.2273764226721987 AKTQT(ph)PPVS(ph)PAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 3 AKT(0.186)QT(0.815)PPVS(1)PAPQPT(0.088)EERLPS(0.485)S(0.427)PVYEDAASFK 126.28 1.928e-22 38285000.0 2966.7 3822.6 3580.7 3296.2 4980.5 3078.5 2995.7 3052.5 4681.3 4248.5 4770.7 True False 3467.406431148782 4017.154012355289 4088.4971025823747 4103.769147972042 4247.875047628454 3404.264826657087 3539.9799130311135 3485.2012228891867 3620.9930244999764 3288.7608992886026 3586.003525378232 0.9669277809154019 1.120231473261472 1.1401263477985963 1.1443851404298881 1.1845707951947457 0.9493199888301904 0.9871657648908015 0.9718900715585846 1.0097572405810877 0.9171103363434987 1.0 11.808161191173783 -7.267873228642943 24.991475484409406 0.9970794507393534 1.1151926435344213 0.5629417173509894 0.05867720186662235 297.9035577758098 1157167.5653357438 0.007793210247772758 0.01262945259945704 5.3966812964410123e-08 7.267873228642943 0.11811319279506782 AKTQT(ph)PPVS(ph)PAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A549_PD325901_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 3 AKT(0.023)QT(0.977)PPVS(1)PAPQPTEERLPS(0.613)S(0.386)PVYEDAASFK;AKT(0.035)QT(0.965)PPVS(1)PAPQPT(0.001)EERLPS(0.605)S(0.395)PVYEDAASFK 183.77 3.951599999999999e-76 133219000.0 7398.200000000001 7600.5 9100.7 8493.8 9185.3 10313.3 9418.1 12102.9 12052.6 12740.6 13410.1 True False 8149.25981773302 8241.020808957068 9718.328228954828 9018.442735180593 8540.15621556475 10229.311904163715 9776.51094928207 11861.498164958626 11546.071136045517 11936.1563416756 11760.742713627855 0.6929205081827018 0.7007228207966593 0.8263362668153293 0.7668259526441643 0.7261578986562451 0.8697845155910449 0.8312834646024064 1.0085670993562355 0.9817467669509014 1.0149151828518859 1.0 13.521691551580279 -7.844820502177866 1.0637325419300214 0.9955511232481322 0.7415571736574842 0.8618642275946629 0.045142293129413105 0.11622519675635655 0.26495252343931425 0.007861655963015099 0.012678543443649654 1.4294846553194818e-08 7.844820502177866 -0.253993949590648 AKTQT(ph)PPVS(ph)PAPQPTEERLPSSPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 AKT(0.026)QT(0.974)PPVS(0.998)PAPQPT(0.002)EERLPSSPVYEDAASFK 198.06 2.8906999999999995e-88 63241000.0 4116.1 4513.7 3670.6 3290.5 4445.0 3037.9 3559.9 2356.0 5816.9 5393.4 4873.5 True False 4810.797051016787 4743.428050428521 4191.146274398544 4096.672647716159 3791.1463882558955 3359.368561605186 4206.687749908023 2689.9702149473947 4499.381437680541 4175.027194121021 3663.2754482425707 1.313250155219622 1.294859782576313 1.1440980438446733 1.118308657265046 1.0349061766771237 0.9170395753933324 1.148340551875822 0.734307385003737 1.2282400003087637 1.1396978614108746 1.0 11.838918468611386 -5.877475297142743 1.7476084875681863 1.0668842578731588 1.3263409036665834 0.3781209733039702 0.1274811389392215 0.3823689705423477 2.121144239330902 0.019635035924389425 0.11068543771890221 1.3259425357983848e-06 5.877475297142743 0.25945664579342465 AKTQT(ph)PPVS(ph)PAPQPTEERLPSSPVYEDAASFK ddPTM_A549_PD325901_60min_R1 3 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 AKT(0.034)QT(0.966)PPVS(0.98)PAPQPT(0.02)EERLPSSPVYEDAASFK;AKT(0.028)QT(0.972)PPVS(0.997)PAPQPT(0.003)EERLPSSPVYEDAASFK;AKT(0.183)QT(0.821)PPVS(0.636)PAPQPT(0.336)EERLPS(0.012)S(0.012)PVYEDAASFK 186.52 3.0097999999999994e-76 244929000.0 6925.200000000001 7459.540000000001 8108.9 7563.360000000001 7871.200000000001 9439.6 8916.4 9765.9 10139.899999999998 11899.9 11728.099999999999 True False 7628.241205937212 8088.181615057904 8659.218716776926 8030.531569563157 7318.354066165859 9362.727027289407 9255.718481241294 9571.111463299661 9713.75526545209 11148.53828315036 10285.618050551362 0.7416415006318748 0.7863583476759898 0.8418763631139061 0.7807534297010649 0.7115133023798758 0.9102736443521269 0.899869938369444 0.930533431852119 0.9444017090379301 1.0838958075594436 1.0 13.328340865845508 -7.8317531191195435 0.8171935132301987 0.9784627622577826 0.7734137425993821 0.7680852439429326 0.052628225845408244 0.18212107631497787 0.24519490293343282 0.008682239720705654 0.015040198007850164 1.4731496973683637e-08 7.8317531191195435 -0.2050490196584005 AKTQT(ph)PPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A549_PD325901_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 AKT(0.166)QT(0.82)PPVS(0.017)PAPQPT(0.813)EERLPS(0.096)S(0.088)PVYEDAASFK 96.88600000000001 5.322799999999999e-10 16940000.0 1048.1 790.17 1349.9 1026.1 1528.8 1303.0 1098.3 1639.4 1782.8 1555.3 1464.6 True False 1154.5023404295596 856.7603990018563 1441.5123316081308 1089.4798665578196 1421.422362073682 1292.3888000082732 1140.0964075128213 1606.7008809155807 1707.8751158540028 1457.0980925708418 1284.4634848643452 0.898820678075943 0.6670181045219362 1.1222680508978204 0.8481983952022442 1.106627303012667 1.006170136588013 0.8876051526160973 1.2508731465303333 1.3296408469209033 1.134402113988261 1.0 10.326950162091222 -6.737777192572714 0.6415444055589498 1.1531050739087452 0.8095919709288143 0.35166970391575436 0.14708484954586748 0.8833261774660076 0.5971043479714635 0.03240454246097399 0.15737466300700997 1.8290383326136621e-07 6.737777192572714 -0.3435131029799309 AKTQT(ph)PPVSPAPQPTEER ddPTM_A549_MK2206_60min_R1 3 AKTQTPPVSPAPQPTEER 18 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 AKT(0.06)QT(0.94)PPVSPAPQPTEER;AKT(0.018)QT(0.982)PPVSPAPQPTEER;AKT(0.17)QT(0.829)PPVS(0.002)PAPQPTEER 126.29 1.6012000000000002e-11 719900000.0 17506.300000000003 17583.4 17086.1 17101.5 24027.0 19101.2 18947.699999999997 17872.1 26908.0 26379.0 28180.0 True False 20460.93545205781 18478.31995522629 19509.165901760203 21291.3682677155 20492.660128374428 21122.47630564961 22390.25182699857 20405.52490601077 20813.380963246407 20419.96557898885 21182.128271565736 0.9659527687557234 0.8723542657434966 0.921020100135487 1.0051571775389732 0.967450478330035 0.9971838539946809 1.0570350410470597 0.9633368585253327 0.9825915836410865 0.9640185970547638 1.0 14.370559930757745 -6.233534805096121 7.674819189950809 0.9936133257263533 0.914731717465144 0.5012487570076103 0.03199934367913586 0.12595479509624008 29.173283135104317 0.003978130661795415 0.010408208019510623 5.840703968252422e-07 6.233534805096121 -0.07888160826120927 AKTQT(ph)PPVSPAPQPTEER ddPTM_A549_PD325901_60min_R1 2 AKTQTPPVSPAPQPTEER 18 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 AKT(0.137)QT(0.859)PPVS(0.004)PAPQPTEER;AKT(0.005)QT(0.995)PPVSPAPQPTEER 175.71 5.704399999999999e-31 980880000.0 23516.0 20865.0 23607.0 22175.0 27749.0 23486.0 24412.0 26789.0 27133.0 26157.0 29035.0 True False 25903.327008435772 22623.366775723858 25209.112980423113 23544.699386921016 25800.005968853086 23294.737802758493 25341.012018758967 26254.67237943606 25992.694367549168 24505.442556018443 25463.879068029695 1.017257698217622 0.8884493487925748 0.9899950008823893 0.9246312914076693 1.0132001451909738 0.9148149714552095 0.9951748494821832 1.031055492735167 1.0207672718719203 0.962360938431624 1.0 14.636164590066327 -7.9851497239821985 24.304357077426054 1.0117430421433633 0.9571379423148031 0.21395584972753556 0.040936624755799296 139.55906324269822 228404.99444259045 0.0052505699140747404 0.007253012691189251 1.034785360638631e-08 7.9851497239821985 -0.05460509982856021 AKTQT(ph)PPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 AKT(0.18)QT(0.819)PPVS(0.001)PAPQPT(0.062)EERLPS(0.565)S(0.373)PVYEDAASFK 150.57 1.1226e-40 69879000.0 3375.9 3690.5 3133.3 2935.6 4357.0 2860.9 2736.8 2159.2 5208.4 5108.7 4922.9 True False 3945.6693871693037 3878.3306866000094 3577.649055078998 3654.8221317840935 3716.091071682999 3163.638539088277 3234.0411342869966 2465.2732122726734 4028.705716105714 3954.6411218537564 3700.408064871927 1.066279534039948 1.0480818922153767 0.9668255479825906 0.9876808361973421 1.0042381830695786 0.8549431531945848 0.8739687833317185 0.6662165818077141 1.0887193102702175 1.0687040598022879 1.0 11.853468658297063 -4.1603230008704495 19.073162767654775 0.9912295014438157 0.9722279852068813 0.0 0.12179827130463176 0.0 0.0 0.016999233267431507 0.0 6.913166219293998e-05 4.1603230008704495 -0.019001516236934468 AKTQT(ph)PPVSPAPQPTEERLPSSPVYEDAASFK ddPTM_A549_MK2206_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 AKT(0.023)QT(0.938)PPVS(0.039)PAPQPTEERLPSSPVYEDAASFK;AKT(0.204)QT(0.794)PPVS(0.002)PAPQPTEERLPSSPVYEDAASFK 170.04 8.769799999999998e-63 224860000.0 3387.3999999999996 3567.1 4263.5 3633.7 5732.1 3956.7 4163.9 3134.9 6712.3 6632.8 7722.2 True False 3959.110306021299 3748.650153684025 4868.12840976903 4523.956663122989 4888.915683266957 4375.395367755104 4920.426731605383 3579.281675228606 5191.974767340523 5134.445873320337 5804.564618122247 0.6820684351864541 0.645810736946658 0.8386724466070032 0.7793791542950331 0.8422536408679866 0.7537852803110885 0.847682307858797 0.6166322387132782 0.894464117279498 0.8845531424166158 1.0 12.502972143857649 -8.972045613378645 4.942582304590897 0.9553457763241419 0.7568306820681052 0.4966341332120391 0.07873618500331712 0.10063898255432198 5.504959653886081 0.014158042133178995 0.014612485572543271 1.0664841039240802e-09 8.972045613378645 -0.19851509425603664 AKTQT(ph)PPVSPAPQPTEERLPSSPVYEDAASFK ddPTM_A549_PD325901_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 AKT(0.173)QT(0.827)PPVSPAPQPTEERLPSSPVYEDAASFK;AKT(0.042)QT(0.737)PPVS(0.221)PAPQPT(0.001)EERLPSSPVYEDAASFK 148.28 1.31e-40 346810000.0 3205.1000000000004 2583.0 3536.7 3203.2 3771.5 3816.9 3885.2 4732.299999999999 4066.2 3815.6 4002.3999999999996 True False 3530.479392530088 2800.6784750392876 3776.7217299047916 3401.0543890049776 3506.6028509686607 3785.816431889163 4033.0534120630145 4637.910564082469 3895.3117545913983 3574.6823648256322 3510.1301733040104 1.0057972833545723 0.7978845047797953 1.0759491937445282 0.9689254304217549 0.9989951021297796 1.0785401808405457 1.1489754547384172 1.3212930390319124 1.109734272596741 1.0183902557268583 1.0 11.777308818581615 -7.081907434076519 2.3233990040604406 1.0854417371489158 0.9571534185502243 0.3151826200122102 0.10183712931608113 0.3685491161850842 3.915142487477302 0.016896999098884 0.03261587810159971 8.281186508707602e-08 7.081907434076519 -0.1282883185986915 AKTQTPPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A549_MK2206_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 AKTQTPPVSPAPQPT(0.333)EERLPS(0.333)S(0.333)PVYEDAASFK;AKTQTPPVS(0.002)PAPQPT(0.331)EERLPS(0.331)S(0.331)PVY(0.003)EDAASFK 89.40299999999999 2.009e-09 6545600.0 1052.45 1287.0 1467.5500000000002 1451.4499999999998 1625.6 1374.3999999999999 1037.78 913.3 1982.14 1781.08 1983.3899999999999 True False 1230.0778300679317 1352.5028027785418 1675.6706573839658 1807.055315158067 1386.4763934192988 1519.838095747117 1226.3311927580967 1042.7630718639457 1533.188454827159 1378.7327909862177 1490.8595242207512 0.8250796336501751 0.9071966746736073 1.1239628081390247 1.212089593821783 0.9299845967338796 1.019437492973399 0.8225665616611871 0.6994375089825995 1.0283922998235078 0.9247905443719519 1.0 10.541928611191725 -5.529077649720269 24.304186644125934 0.9943253660698418 0.8456088219086113 0.08505852842056394 0.132083551513834 141.85817176554775 556192.6287957188 0.01849713969448001 0.07206990286332383 2.957483635728787e-06 5.529077649720269 -0.14871654416123048 AKTQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A549_MK2206_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 AKTQTPPVSPAPQPT(0.109)EERLPS(0.506)S(0.384)PVYEDAAS(0.001)FK;AKTQTPPVSPAPQPT(0.099)EERLPS(0.451)S(0.451)PVYEDAASFK 125.96 1.1418e-22 60268000.0 1388.57 2036.8000000000002 1820.1599999999999 1775.29 1825.05 1587.06 1552.35 1394.02 3492.7 2398.3 2880.2 True False 1622.9266687229124 2140.4644201238034 2078.2860575407994 2210.2361296957956 1556.587562629116 1755.0016357948346 1834.3919010561299 1591.626604007202 2701.609026695803 1856.5223643083114 2164.9668505239047 0.7496311864221741 0.9886823068934418 0.9599620691826625 1.020909917932894 0.7189890978018598 0.8106367242390516 0.847307154200639 0.7351736603366658 1.24787547026045 0.8575292336966027 1.0 11.080129219567478 -8.760807314492498 24.999999997340677 1.117052305226244 0.8613454540659224 0.20263690434387271 0.13517739844179244 11.252357267112895 445061.5509377858 0.022245559622288438 0.024496968402502865 1.7345734135291339e-09 8.760807314492498 -0.25570685116032155 AKTQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A549_PD325901_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 AKTQTPPVSPAPQPT(0.116)EERLPS(0.442)S(0.442)PVYEDAASFK;AKTQTPPVSPAPQPT(0.001)EERLPS(0.581)S(0.418)PVYEDAASFK 173.94 3.3380999999999994e-63 109072000.0 2576.2 2460.8 3088.5 3354.2 2494.6000000000004 4806.7 4387.2 3687.0 3964.2000000000003 4164.0 3430.5 True False 2837.7339275017976 2668.1802521783525 3298.1041826592436 3561.381316059094 2319.3879019028036 4767.555828856305 4554.157296767955 3613.4598926044546 3797.5984598768414 3901.0843293673133 3008.570247731216 0.9432167753575814 0.8868598810981548 1.0962363884128572 1.183745441458366 0.7709269556367747 1.5846583048714094 1.5137280906777153 1.2010555164299022 1.26226019244212 1.2966572185938314 1.0 11.554862327609104 -5.893690889964609 3.4186424779278464 1.1702322017589766 0.9134158218780158 0.20832852021399595 0.21452497678746962 0.33032885561123676 7.47322991010654 0.03150828027571668 0.11406750741849342 1.2773476402831092e-06 5.893690889964609 -0.25681637988096073 AKVPAQANGT(ph)PTTK ddPTM_A549_MK2206_60min_R1 2 AKVPAQANGTPTTK 14 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 AKVPAQANGT(0.873)PT(0.112)T(0.015)K;AKVPAQANGT(0.984)PT(0.014)T(0.002)K 103.13 1.0313e-05 36969000.0 4380.0 4400.6 3977.3 4061.4 5112.3 4007.2 4244.700000000001 3537.1000000000004 5594.4 6355.0 6089.5 True False 5119.236919281242 4624.571743517679 4541.340946211881 5056.443182323175 4360.287442222857 4431.239244235919 5015.907045713243 4038.494756914444 4327.277332421048 4919.401086260814 4577.309088349876 1.1183944148125533 1.0103254235743213 0.9921420770492556 1.104675931802986 0.9525875045931723 0.968088271669105 1.0958200438068912 0.8822857882141241 0.9453758199189113 1.0747364862865885 1.0 12.160283999623072 -2.000000000022715 0.38746946469248544 0.9729923818554348 2.833626908200794 0.1492837102627177 0.06704383303228915 57.388470447401914 0.6788683018165429 0.013474135037816937 81.75973678005423 0.009999999999476964 2.000000000022715 1.860634526345359 AKVPAQANGT(ph)PTTK ddPTM_A549_PD325901_60min_R1 4 AKVPAQANGTPTTK 14 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 AKVPAQANGT(0.937)PT(0.049)T(0.015)K;AKVPAQANGT(0.932)PT(0.063)T(0.005)K;AKVPAQANGT(0.983)PT(0.015)T(0.003)K;AKVPAQANGT(0.669)PT(0.294)T(0.037)K 95.76700000000001 1.9319000000000003e-05 64181000.0 9738.4 9032.0 9288.8 9485.4 12055.199999999999 11453.9 11482.800000000001 11028.800000000001 11118.8 10847.8 10705.4 True False 10727.035198968828 9793.158337806759 9919.193826092012 10071.291615093605 11208.484340182265 11360.623235928439 11919.78423762927 10808.82193207377 10651.51550266855 10162.868056702871 9388.70366712192 1.1425469989572234 1.0430788621118365 1.0565030251010907 1.0727031092015424 1.1938266173457996 1.2100310797657763 1.2695878643364666 1.151258183802832 1.134503322324342 1.082457005464128 1.0 13.196710258076578 -10.402519202682647 0.8797957764357819 1.0045940817127976 1.140693974506298 0.2155762242812187 0.06834513670990536 0.5078700651489225 0.7413018879430192 0.0407129812571945 0.013838062447175545 3.958045636291074e-11 10.402519202682647 0.13609989279350043 AKVPAQANGTPT(ph)TKSPAPGAPTR ddPTM_A549_MK2206_60min_R1 2 AKVPAQANGTPTTKSPAPGAPTR 23 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 AKVPAQANGT(0.01)PT(0.351)T(0.351)KS(0.284)PAPGAPT(0.003)R;AKVPAQANGT(0.014)PT(0.329)T(0.329)KS(0.329)PAPGAPTR 73.805 4.2532e-05 7076400.0 1133.01 1192.74 1056.08 1353.93 1554.55 1220.85 1168.73 1064.1399999999999 1968.62 1951.98 1980.5900000000001 True False 1324.2343885650318 1253.445371395555 1205.8480241559466 1685.6429107802285 1325.877754299933 1350.0395366653584 1381.0731127138406 1214.9851037920723 1522.730713240156 1511.0263622910134 1488.754841496819 0.8894912390233604 0.8419420958089514 0.8099708498301621 1.1322501622130445 0.890595091510751 0.9068246154672492 0.9276699388095938 0.816108246922983 1.02282167002673 1.0149598309764705 1.0 10.539890484467408 -8.793626347590306 24.9796089208651 1.0107769307858967 0.905126953822671 0.2653717303524026 0.08191000987193738 187.72821808194266 145690.96158324627 0.013950648223329998 0.014850881976921243 1.6083244063078906e-09 8.793626347590306 -0.10564997696322564 AKVPAQANGTPTTKS(ph)PAPGAPTR ddPTM_A549_PD325901_60min_R1 2 AKVPAQANGTPTTKSPAPGAPTR 23 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 AKVPAQANGT(0.185)PT(0.142)T(0.142)KS(0.531)PAPGAPTR;AKVPAQANGT(0.014)PT(0.143)T(0.143)KS(0.7)PAPGAPTR 106.04 6.0177e-11 11835700.0 1803.6100000000001 1853.73 1976.7400000000002 2223.7 2940.0 2720.2 2276.6000000000004 2144.9 3391.6000000000004 2203.0 2677.0 True False 1986.711159452494 2009.9503327660018 2110.8934635032642 2361.0528986108807 2733.5045424493887 2698.0475930794364 2363.2372588033227 2102.1182868585024 3249.062846606706 2063.9022040336677 2347.7459709011678 0.8462206661523551 0.8561191703353216 0.8991149339266082 1.0056679589166135 1.1643101836099201 1.1492076342670956 1.0065983663028963 0.8953772311455048 1.383907325101094 0.8790994552283063 1.0 11.197060600117052 -6.438614481365317 1.8734771741424279 1.1471162043327834 0.8530977465950702 0.14964525256716288 0.1461074919847089 0.2954339919252164 2.0135962396889058 0.024003989641567226 0.07028460609999325 3.642382230931928e-07 6.438614481365317 -0.2940184577377132 ALAAAGYDVEK ddPTM_A549_MK2206_60min_R1 3 ALAAAGYDVEK 11 0 P10412;Q02539;P22492;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2 0 ;; 190.24 1.4447e-18 53594580.0 10326.07 11756.86 10181.9 9620.8 14791.16 10537.0 10193.43 10667.25 16196.630000000001 14466.35 15985.439999999999 False True 12068.858167827044 12355.23395639078 11625.84652408286 11977.89643189412 12615.399957731164 11652.018346105488 12045.444285104904 12179.365354583024 12528.119165703345 11198.39148768358 12015.814072300127 1.004414523660881 1.0282477643252748 0.9675454741667272 0.9968443552656646 1.0498997306236 0.9697235889299176 1.0024659346946025 1.0136113359693146 1.0426359038447697 0.931971102440663 1.0 13.552646774025103 -8.40623893160277 4.645310753223701 1.0204646868852985 1.002767975052008 0.0 0.03566592075611936 0.44401257917242337 15.153150132558796 0.004244725499438533 0.005134965949772163 3.92428977137061e-09 8.40623893160277 -0.017696711833290468 ALAAAGYDVEK ddPTM_A549_PD325901_60min_R1 2 ALAAAGYDVEK 11 0 P10412;Q02539;P22492;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2 0 ; 205.14 4.8398e-24 100893000.0 17686.7 18157.4 18104.4 18358.1 21366.3 18710.6 18412.1 18501.5 20434.0 19428.6 21349.0 False True 19482.24076373962 19687.587821400855 19333.07345460127 19492.038142729867 19865.604797733446 18558.227077079664 19112.782540987704 18132.473068354033 19575.23004114914 18201.874880294385 18723.20834246137 1.0405396557788058 1.0515071702082395 1.0325726820417216 1.041062930359265 1.061014994565931 0.9911884083985995 1.0208070214997735 0.9684490359076099 1.0455061805169106 0.9721557623762226 1.0 14.192540050750708 -7.251385111798443 24.84623919169538 1.0156187644458616 1.0447352816421238 0.3952215909752962 0.02405464646098548 679.5175049483089 1679228.9569551602 0.003437953165099281 0.005901437255665329 5.6055068575195103e-08 7.251385111798443 0.02911651719626218 ALAAFLK ddPTM_A549_MK2206_60min_R1 2 ALAAFLK 7 0 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 ; 123.34 0.01736 5751200.0 1890.79 2240.0 1988.1 1894.19 2297.4 2000.4499999999998 2097.47 1669.1799999999998 2832.8 1797.3899999999999 2790.6 False True 2209.9091266227815 2354.0064321864306 2270.042474835652 2358.2666350334207 1959.4555033473785 2212.1362912087616 2478.5531489085597 1905.7913766493598 2191.175323052045 1391.3583506584316 2097.6170033581016 1.0535331869854745 1.1222289047132399 1.0822006453997617 1.124259877402806 0.9341340674729759 1.0545949463926563 1.1816042418328097 0.908550690425542 1.0446021936054888 0.6633042869270169 1.0 11.03453556991915 -5.372351548917076 0.16465801328232363 0.9928588721652009 1.1818642542485251 0.12722865648259818 0.12641744357123263 27.923328657177358 0.7864739957159174 0.1338857319587407 1.1360391915338497 4.242759856747481e-06 5.372351548917076 0.1890053820833243 ALAAFLK ddPTM_A549_PD325901_60min_R1 2 ALAAFLK 7 0 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 ; 126.05 0.016421 11640000.0 4103.7 4168.6 4268.0 3848.3 4430.2 4354.0 4487.1 4558.9 3980.4 4297.9 4475.2 False True 4520.304603015728 4519.902551702975 4557.652145568935 4086.0007508765807 4119.0380353603 4318.5424675641 4657.859045935337 4467.969163112135 3813.11763021386 4026.5298605157977 3924.778770630153 1.1517348791330624 1.1516324399036817 1.1612507129509289 1.0410779790832752 1.0494955960788988 1.1003276158851434 1.1867825725085348 1.1384002574990408 0.9715496982271017 1.0259253058152136 1.0 11.938395620065105 -8.762032348890065 24.999992894696675 0.9865651286790611 1.121089109400293 0.5979906703323605 0.04473554943534984 7.286073164369844 307183.2422252017 0.008086702080222143 0.00886387542542331 1.7296875167876986e-09 8.762032348890065 0.13452398072123195 ALAAGADS(ph)PKTEEAR ddPTM_A549_MK2206_60min_R1 1 ALAAGADSPKTEEAR 15 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(0.952)PKT(0.048)EEAR 47.20399999999999 0.0081754 28509000.0 3973.7 5562.1 4170.3 4160.6 5433.1 4537.1 4056.0 5173.6 5800.9 7725.6 6341.6 True False 4644.363412362526 5845.187132350063 4761.71124833113 5179.947186776433 4633.898187184051 5017.212910516768 4792.922698285612 5906.973643485502 4487.005412133788 5980.381594337778 4766.805700743834 0.9743135558551922 1.226227268176245 0.9989312649324246 1.0866705110233739 0.9721181181060005 1.0525314488345643 1.0054789305839973 1.239189095239135 0.9413023508454762 1.2545889154669283 1.0 12.218807105730221 ALAAGADS(ph)PKTEEAR ddPTM_A549_PD325901_60min_R1 2 ALAAGADSPKTEEAR 15 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(0.984)PKT(0.016)EEAR;ALAAGADS(0.973)PKT(0.027)EEAR 83.666 5.9851999999999995e-05 92377000.0 18572.9 18643.0 18763.199999999997 18038.4 23092.0 20041.6 20193.1 16897.300000000003 19531.1 20452.5 22700.0 True False 20458.40713535368 20214.111037614195 20036.5835842875 19152.590999821237 21470.09758307525 19878.387854371296 20961.559470588298 16560.270095824588 18710.27578822981 19161.12565955451 19908.04390715597 1.0276452689558253 1.0153740433708913 1.0064566703655564 0.9620528811942601 1.0784634433801805 0.9985103482329565 1.0529190898083984 0.8318381340254116 0.9398349669856002 0.9624815852785527 1.0 14.281063853541914 ALAAGADS(ph)PKTEEARPSPAPGPGT(ph)PTGTPTR ddPTM_A549_PD325901_60min_R1 1 ALAAGADSPKTEEARPSPAPGPGTPTGTPTR 31 2 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 2 ALAAGADS(0.985)PKT(0.015)EEARPSPAPGPGT(0.964)PT(0.034)GT(0.001)PTR 113.22 7.0095e-16 26373000.0 4660.9 3831.6 3714.8 4031.4 4537.4 4520.8 4126.3 3805.9 4434.8 3937.7 4687.1 True False 5134.071136826772 4154.50237900137 3966.9086669070944 4280.410422026309 4218.708677180221 4483.984103666461 4283.328604497997 3729.988338829209 4248.420778432425 3689.072949987912 4110.616413974925 1.2489784061028881 1.0106762491574852 0.9650398547090734 1.0413062156503177 1.0262958769000707 1.0908300975061045 1.0420161292442416 0.9074036502526266 1.0335240145465785 0.8974500606395952 1.0 12.00513903640443 -5.260867399919372 24.656374134832973 1.0144848150774721 1.2489784894715 0.602407574466471 0.05692146472348514 15.967483653560814 688094.9414595717 0.005941533008236864 0.04877502774788226 5.484443920299798e-06 5.260867399919372 0.2344936743940278 ALAAGADS(ph)PKTEEARPSPAPGPGTPTGTPTR ddPTM_A549_MK2206_60min_R1 4 ALAAGADSPKTEEARPSPAPGPGTPTGTPTR 31 2 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(0.941)PKT(0.059)EEARPSPAPGPGTPTGTPTR;ALAAGADS(0.96)PKT(0.04)EEARPSPAPGPGTPTGTPTR;ALAAGADS(0.999)PKT(0.001)EEARPSPAPGPGTPTGTPTR;ALAAGADS(0.459)PKT(0.459)EEARPS(0.024)PAPGPGT(0.04)PT(0.009)GT(0.009)PT(0.002)R 209.69 6.489799999999998e-91 286721700.0 28732.29 29882.300000000003 26147.79 23210.58 36132.75 28657.1 26793.909999999996 28603.1 38237.5 39313.4 39910.100000000006 True False 33581.598114953274 31403.181432377045 29855.939803371537 28897.173141962525 30817.670339764496 31689.57530095656 31662.016621011273 32657.67701831996 29576.76730274021 30432.475635657895 29999.320707275205 1.1194119507782496 1.046796417118918 0.9952205283145329 0.9632609159364933 1.0272789387624643 1.056343095571209 1.0554244521054386 1.0886138835270383 0.9859145675777745 1.014438824552372 1.0 14.872642212825912 -5.369451533542088 2.731139984416688 1.0083685879786382 1.128101942859776 0.3458737651459183 0.035974010768479656 0.2727457195912826 3.0673647422143313 0.005570427611067986 0.06454398519226434 4.271185824219984e-06 5.369451533542088 0.1197333548811379 ALAAGADS(ph)PKTEEARPSPAPGPGTPTGTPTR ddPTM_A549_PD325901_60min_R1 4 ALAAGADSPKTEEARPSPAPGPGTPTGTPTR 31 2 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(0.998)PKT(0.002)EEARPSPAPGPGTPTGTPTR;ALAAGADS(0.976)PKT(0.024)EEARPSPAPGPGTPTGTPTR;ALAAGADS(1)PKTEEARPSPAPGPGTPTGTPTR;ALAAGADS(0.824)PKT(0.176)EEARPSPAPGPGTPTGTPTR 209.42 6.640199999999999e-91 580412000.0 16396.12 19200.4 17894.9 21106.6 20858.800000000003 21570.399999999998 18806.699999999997 19926.100000000002 19356.8 23717.3 21189.100000000002 True False 18060.6420322144 20818.48509180967 19109.355524775427 22410.306745433456 19393.749846953513 21394.737814043336 19522.39925992111 19528.65830377696 18543.301011085226 22219.78563038025 18582.97502877175 0.9718918528519449 1.120298825111518 1.02832595400837 1.2059590410435306 1.0436299794261388 1.1513085381064212 1.0505529512736718 1.0508897673026532 0.9978650341172446 1.1957065860540457 1.0 14.181693867043428 -8.462671967424662 1.8380022864167629 0.998592776766399 1.0884827060184235 0.0 0.08421376879300863 0.27997576481118225 1.8486179267296714 0.009684630484884665 0.01162288203188394 3.4461012441059468e-09 8.462671967424662 0.08988992925202444 ALAAGGVGSIVR ddPTM_A549_PD325901_60min_R1 1 ALAAGGVGSIVR 12 0 O15511-2;O15511 O15511-2 ARPC5 Actin-related protein 2/3 complex subunit 5 0 97.431 0.00070302 1561300.0 1017.7 942.98 955.52 781.76 1004.5 927.86 712.11 984.23 872.59 1040.0 1357.4 False True 1121.0161548088577 1022.4482339885974 1020.3673332085349 830.0475396942218 933.9473853368739 920.3038157910023 739.209735731544 964.5987605365016 835.9180768134645 974.3342225124895 1190.4484052675555 0.9416755483467654 0.8588765623645825 0.8571285649118119 0.6972562070068606 0.7845341143759754 0.7730732484657009 0.6209506707394054 0.8102818704853539 0.7021875732830188 0.8184598494157386 1.0 10.217289379375627 -10.885203327488178 1.1109698177605172 1.0011543307215178 0.7748109811208564 0.10499187324270243 0.09881885597426465 0.35643037853593074 0.7745474968982686 0.06272406759046302 0.014752913146426926 1.3025568061365791e-11 10.885203327488178 -0.22634334960066138 ALAAVPSAGS(ph)VQR ddPTM_A549_PD325901_60min_R1 2 ALAAVPSAGSVQR 13 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 ALAAVPS(0.001)AGS(0.999)VQR;ALAAVPS(0.014)AGS(0.986)VQR 132.06 3.5981e-08 15486300.0 10173.5 10545.099999999999 10453.8 10264.3 11626.7 10210.8 9504.6 10009.400000000001 12551.5 12053.5 11146.1 True False 11206.306230665145 11433.772585031666 11163.25773180612 10898.302499083356 10810.080701937517 10127.646630179948 9866.302754116687 9809.754664777609 12024.004104016994 11292.439952936818 9775.200360949395 1.1464016917170132 1.169671430031045 1.1419978434817384 1.1148930044053729 1.105867941604791 1.036055145287715 1.0093197468904302 1.0035348946878115 1.2300519334673965 1.1552131450981393 1.0 13.254910558108742 -6.390529783077317 1.9386235374078675 1.0895445742998395 1.1574264288493965 0.18628633590435073 0.06694905800012631 0.7099265515934543 5.14799231425968 0.01344591922368488 0.040180391583457736 4.068836295584277e-07 6.390529783077317 0.06788185454955697 ALAEEAS(ph)EEELPS(ph)DVDLNDPYFAEEVK ddPTM_A549_PD325901_60min_R1 1 ALAEEASEEELPSDVDLNDPYFAEEVK 27 0 Q9H501 Q9H501 ESF1 ESF1 homolog 2 ALAEEAS(0.983)EEELPS(0.959)DVDLNDPY(0.058)FAEEVK 51.858000000000004 0.0027667 15424000.0 7903.9 7280.0 8153.0 8728.7 10186.0 8580.7 8426.8 8967.3 8458.3 8613.3 8349.2 True False 8706.298109456346 7893.511149162219 8706.31160797177 9267.85197468399 9470.570499792339 8510.821624122014 8747.486485321891 8788.440166789243 8102.827065530576 8069.454768045028 7322.3013299395025 1.1890111751967845 1.0780096029218502 1.189013018676698 1.265702073307131 1.293387156995161 1.1623151302614216 1.1946362340423053 1.2002292408883772 1.1065956863042021 1.1020380621390924 1.0 12.838081429823836 -9.368241128599477 0.7782320568063189 1.0167797689832287 1.2002519332769321 0.4553343305318741 0.05969425538888193 0.26200023700619796 0.3428933661302583 0.019123437227041355 0.013559656116401555 4.283106481073778e-10 9.368241128599477 0.1834721642937034 ALAEEASEEELPS(ph)DVDLNDPYFAEEVK ddPTM_A549_PD325901_60min_R1 2 ALAEEASEEELPSDVDLNDPYFAEEVK 27 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 ALAEEASEEELPS(1)DVDLNDPYFAEEVK;ALAEEASEEELPS(1)DVDLNDPYFAEEVK 147.87 2.7716999999999996e-33 15741300.0 3202.4 3042.0 3142.8999999999996 3343.2 2827.4 3189.4 3943.7000000000003 3715.0 3078.0 3404.1000000000004 3075.1 True False 3527.50529051772 3298.36001589993 3356.1960937930194 3549.701871041907 2628.8131780004774 3163.4265838422016 4093.779661575444 3640.90141063888 2948.642364033328 3189.1645450526617 2696.8821946649937 1.307993837289547 1.2230271023423966 1.244472636006233 1.31622429710277 0.9747601075051883 1.172993981754239 1.5179675514465596 1.3500409538990457 1.0933523050678184 1.1825375803813407 1.0 11.397076787739278 -8.923886893244672 4.779321833336059 1.0397916339739324 1.2587358841430816 0.23084523861467887 0.13257900222977365 0.1682228142974477 6.788345149271254 0.023596886819054263 0.02474930466482001 1.1915522930318047e-09 8.923886893244672 0.2189442501691492 ALAEIAK ddPTM_A549_PD325901_60min_R1 2 ALAEIAK 7 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 119.89 0.018556 4468100.0 3566.9 3144.4 3546.7 3506.8 3436.8 3452.8999999999996 3551.2 3200.9 3864.6 3839.3999999999996 3804.3999999999996 False True 3929.009062187003 3409.3896232727607 3787.4003900396765 3723.407071479351 3195.4110243163473 3424.7807272053465 3686.342859291202 3137.055538442528 3702.1843015085137 3596.979628763895 3336.482918078597 1.1775900427656403 1.021851364740734 1.1351475439954455 1.1159676710179518 0.9577183827323505 1.026464337236169 1.1048589037626728 0.9402282629545382 1.1096068502099559 1.0780752418283959 1.0 11.704112402309995 -2.000000003620289 0.6263242108451665 1.0441360640583166 9.379116889597123 0.23570760444903682 0.06369376667666184 223.60145239456568 1.4472639932915294 0.01086532484232207 2576.2755978365863 0.009999999916639767 2.000000003620289 8.334980825538807 ALALDLGS(ph)PAALR ddPTM_A549_MK2206_60min_R1 2 ALALDLGSPAALR 13 0 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 ALALDLGS(1)PAALR;ALALDLGS(1)PAALR 86.31299999999999 0.00023256 2096900.0 1094.37 1095.44 682.48 1027.4 1502.75 1011.82 954.31 1043.6200000000001 1338.1100000000001 1309.29 1418.47 True False 1279.0729012223323 1151.1932169974564 779.2659263748488 1279.1130461217394 1281.697465680887 1118.8901208082427 1127.695774211276 1191.5563309522086 1035.0302215225815 1013.5204796586032 1066.2247512195834 1.1996278455919225 1.0796909522881393 0.7308646000606331 1.1996654970339484 1.202089394581057 1.0493942478154057 1.0576529694338648 1.1175470552425901 0.9707430073618902 0.9505692664696677 1.0 10.058295862809086 -8.77281699501626 24.94334035709072 0.986184191389093 1.0742985126136522 0.1223943727067428 0.12438804223646725 383.64461107021367 841068.5487446588 0.02138407590126116 0.0228606328195865 1.6872638625295593e-09 8.77281699501626 0.0881143212245592 ALALDLGS(ph)PAALR ddPTM_A549_PD325901_60min_R1 2 ALALDLGSPAALR 13 0 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 ALALDLGS(1)PAALR;ALALDLGS(1)PAALR 121.04 9.6051e-06 3899300.0 3093.8 3144.4 3195.3 3226.7 3798.5 3686.9 3067.6 3196.2 3910.5 3558.5 3326.1 True False 3407.8802984648155 3409.3896232727607 3412.1522728998157 3426.0059306326043 3531.706464113607 3656.875108787797 3184.339196655129 3132.4492836296067 3746.1552841300627 3333.815702702589 2917.0107858850865 1.168278264501099 1.168795686245046 1.1697427686625752 1.1744920338349305 1.2107279414950838 1.2536378427130908 1.0916446425442095 1.0738559140017547 1.2842445774479354 1.1428876844865812 1.0 11.510275005390518 -11.030025705573102 1.3060573039988008 0.9994460835194872 1.1867563533745802 0.14846471628326185 0.07102909329279244 0.28390198255209187 0.8586394415365861 0.04712086128152755 0.010461981753748807 9.331990637914674e-12 11.030025705573102 0.18731026985509303 ALAMPGRPES(ph)PPVFR ddPTM_A549_MK2206_60min_R1 6 ALAMPGRPESPPVFR 15 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR 107.75 1.1256e-06 361495200.0 10409.9 10758.9 10622.1 9730.7 13614.9 12312.900000000001 9808.800000000001 9799.5 15982.800000000001 16306.699999999999 17340.4 True False 12166.83662238033 11306.482055022578 12128.47350332065 12114.72193682773 11612.166245548975 13615.84290535846 11590.931992836266 11188.6091347101 12362.721319286999 12623.005144504992 13034.300109306536 0.9334476358798249 0.8674406727024576 0.9305043923809057 0.9294493632364483 0.890892963041249 1.0446163423563266 0.8892638573328766 0.8583973854278062 0.9484760375020038 0.9684451822228738 1.0 13.670025497448513 -9.71068265439839 1.0046128790491218 0.9915969370154949 0.9201173486252168 0.1980721461744872 0.04830832275992608 0.4401830239701091 0.91930411414275 0.01475197719890914 0.009439603567213429 1.9467821053881008e-10 9.71068265439839 -0.07147958839027813 ALAMPGRPES(ph)PPVFR ddPTM_A549_PD325901_60min_R1 8 ALAMPGRPESPPVFR 15 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR 85.176 2.9735e-05 792131600.0 14683.3 15356.899999999998 15552.2 14490.600000000002 19290.0 17606.5 16519.6 18329.0 17877.5 17804.7 19424.4 True False 16173.937806725851 16651.079858045232 16607.665814975906 15385.651451459653 17935.1369468873 17463.118501416466 17148.262417871978 17963.413716177667 17126.170845680914 16680.508203430887 17035.321941416772 0.9494354061723542 0.9774443896808689 0.9748959175581451 0.9031617661450593 1.0528205459553348 1.0251123261110564 1.0066297823336476 1.0544804364691513 1.0053329725482478 0.9791718795097584 1.0 14.056241591961495 -6.7678435997834105 24.999981200537068 1.011525869334417 0.9547966244086005 0.5596308176460294 0.027942640582199963 93.56493208347125 365248.591366056 0.0038405312954212342 0.007384427708537442 1.7066969022387218e-07 6.7678435997834105 -0.056729244925816436 ALAS(ph)IDSK ddPTM_A549_MK2206_60min_R1 2 ALASIDSK 8 0 P18206;P18206-2 P18206 VCL Vinculin 1 ALAS(0.985)IDS(0.015)K;ALAS(0.997)IDS(0.003)K 105.4 0.00070356 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALAS(ph)IDSK ddPTM_A549_PD325901_60min_R1 2 ALASIDSK 8 0 P18206;P18206-2 P18206 VCL Vinculin 1 ALAS(0.928)IDS(0.072)K;ALAS(0.937)IDS(0.063)K 79.97399999999999 0.0039949 19744000.0 6474.6 6306.8 6444.2 6482.7 7235.2 5871.200000000001 5987.700000000001 6443.799999999999 6385.9 7153.6 7198.1 True False 7131.896625651399 6838.296169716526 6881.542164122616 6883.121655720086 6727.024512084969 5823.386893790159 6215.565200095161 6315.273353936689 6117.522830565446 6701.920475158987 6312.779332515394 1.129755413580981 1.0832465083159708 1.0900970557734657 1.0903472611923903 1.0656200950088515 0.9224759154490781 0.9846004228407748 1.000395075020039 0.9690696456085143 1.0616433938438548 1.0 12.624059606260401 -7.076497329716842 5.581057345087362 0.9823842796772883 1.094767904463393 0.7041986657813482 0.03320854517926073 0.06302592167241819 3.447190675142503 0.0034789421261518377 0.006123679084077139 8.384992341639401e-08 7.076497329716842 0.11238362478610464 ALASIDS(ph)KLNQAK ddPTM_A549_PD325901_60min_R1 1 ALASIDSKLNQAK 13 1 P18206;P18206-2 P18206 VCL Vinculin 1 ALAS(0.002)IDS(0.998)KLNQAK 111.64 1.6339e-14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALASNTSFFSGCS(ph)PIEEEAH ddPTM_A549_MK2206_60min_R1 1 ALASNTSFFSGCSPIEEEAH 20 0 O95239;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 ALASNTSFFSGCS(1)PIEEEAH 180.18 1.6605999999999997e-35 4027600.0 672.62 894.04 1059.1 880.73 1110.7 949.99 1054.5 622.19 960.93 1244.3 1478.0 True False 786.1418120198512 939.5428172464092 1209.2963055673465 1096.5088895374718 947.3175013353926 1050.517311247675 1246.0890003309114 710.3873378769607 743.2808892898903 963.2117657961189 1110.9718092751648 0.7076163458483761 0.8456945616463467 1.0885031424481706 0.9869817401153238 0.8526926546889199 0.9455841295676689 1.1216207197407662 0.6394287703307622 0.6690366785947806 0.8669992863496244 1.0 10.117606493706896 -8.261405532988785 24.999997673386787 0.8240236674673023 0.9371359976539438 0.17828608018679692 0.1409657984434198 6.0398493719227915 4460818.061148414 0.027619811440709973 0.03449742509250583 5.477652369848581e-09 8.261405532988785 0.11311233018664157 ALASNTSFFSGCS(ph)PIEEEAH ddPTM_A549_PD325901_60min_R1 2 ALASNTSFFSGCSPIEEEAH 20 0 O95239;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 ALASNTSFFSGCS(1)PIEEEAH;ALASNTSFFSGCS(1)PIEEEAH 191.29 3.3812e-44 20392100.0 3471.44 3931.3 3573.8 4187.0 4052.1 4076.7 3842.3999999999996 4188.0 4134.1 3922.4 4340.7 True False 3823.8580332609395 4262.604447898548 3816.3395590052146 4445.62148063307 3767.494474986109 4043.5007068255763 3988.624634641959 4104.467054577559 3960.3581537200107 3674.738994599028 3806.821417964403 1.0044752861839383 1.1197279777252758 1.0025002856703222 1.167804052917788 0.9896693491339756 1.0621724170575177 1.0477572222903933 1.078187444046775 1.0403320037633148 0.9653037511184325 1.0 11.89437117779312 -9.90010975616638 0.5336926281167697 0.9979025323819323 1.0622544618532694 0.2229502301155304 0.051090452642848776 1.1043665541043735 0.6322457181142849 0.03172196994970714 0.01177304866311075 1.2586072926970753e-10 9.90010975616638 0.06435192947133717 ALASQLQDS(ph)LKDLK ddPTM_A549_MK2206_60min_R1 1 ALASQLQDSLKDLK 14 1 P18206;P18206-2 P18206 VCL Vinculin 1 ALAS(0.002)QLQDS(0.998)LKDLK 77.468 0.00020014 2111300.0 2115.6 2099.0 2530.1 2240.1 3373.7 2488.4 2056.4 2265.7 3653.6 3228.5 3571.0 True False 2472.661558545982 2205.8301344461233 2888.9062248285736 2788.92460056191 2877.4331991133654 2751.720836333763 2430.021261527249 2586.869913415243 2826.0654336003067 2499.1796077093713 2684.2221454138135 0.921183651945761 0.8217762967997797 1.0762545230336011 1.0390066281686068 1.0719802770533233 1.0251464622759618 0.9052981198590866 0.9637316784063853 1.052843349209693 0.9310628823994316 1.0 11.390288358146812 -5.759908346893124 24.999752207889475 1.0200099432290635 0.8714799564475537 0.4374773229610137 0.05792520805652438 21.580135305733805 352339.07591528335 0.007289550557081988 0.025529769203062595 1.7381676113347276e-06 5.759908346893124 -0.14852998678150975 ALASVPS(ph)PALPR ddPTM_A549_MK2206_60min_R1 1 ALASVPSPALPR 12 0 O60336-3;O60336-6;O60336;O60336-4;O60336-2 O60336-3 MAPKBP1 Mitogen-activated protein kinase-binding protein 1 1 ALAS(0.008)VPS(0.992)PALPR 58.273999999999994 0.012466 1612200.0 1027.6 1142.5 896.12 808.37 1685.1 1480.9 942.37 1077.3 1741.7 1428.7 1562.0 True False 1201.0337575921023 1200.6483699879445 1023.2032908554531 1006.420686289108 1437.2240222384712 1637.6078550581385 1113.5864307651407 1230.0105740928814 1347.2077309233782 1105.9556777247565 1174.1122909931041 1.0229292094167817 1.0226009719840299 0.8714697041370659 0.8571758374472369 1.2240941801425298 1.3947625517768782 0.9484496834823452 1.0476089753327569 1.1474266484203688 0.9419505154735256 1.0 10.197354677702725 -6.751139424014173 24.998727161255527 1.094023985770743 0.9440427178749458 0.24678728314097975 0.13167940256001662 252.70725528611322 613334.2442543239 0.019003648940793927 0.03921327957825332 1.773619994222817e-07 6.751139424014173 -0.14998126789579724 ALASVPS(ph)PALPR ddPTM_A549_PD325901_60min_R1 2 ALASVPSPALPR 12 0 O60336-3;O60336-6;O60336;O60336-4;O60336-2 O60336-3 MAPKBP1 Mitogen-activated protein kinase-binding protein 1 1 ALAS(0.009)VPS(0.991)PALPR;ALAS(0.005)VPS(0.995)PALPR 66.267 0.0054192 6999600.0 5266.1 7056.5 6464.0 6632.9 6240.9 6657.8 6132.4 6654.4 6343.700000000001 7189.8 7151.0 True False 5800.7105953020755 7651.176019788904 6902.685911189693 7042.599168591133 5802.560713936187 6603.581084186557 6365.771837778041 6521.672771724187 6077.096349810989 6735.83480098106 6271.47233392389 0.92493600967107 1.219996774665156 1.1006483874370965 1.1229578627806478 0.9252310151395793 1.0529554676445292 1.0150362624329956 1.039895007819281 0.9690063235930301 1.074043612461674 1.0 12.614588464450721 -6.745359165293142 24.98675122230988 0.9932568019184395 1.1018759005338605 0.18280937574006295 0.07610233035541768 196.84940040908904 305879.0212988061 0.009257673102223455 0.019224385704513205 1.7973838483152185e-07 6.745359165293142 0.10861909861542107 ALDEGDIALLK ddPTM_A549_MK2206_60min_R1 1 ALDEGDIALLK 11 0 C9JLS9;P35998 C9JLS9 PSMC2 26S protease regulatory subunit 7 0 142.92 7.7219e-11 857460.0 482.25 634.35 777.73 571.59 1113.2 659.55 834.3 643.78 1112.0 705.89 1178.7 False True 563.642010119493 666.6357054720812 888.0238086383642 711.6295756596502 949.4497546471231 729.3431432261432 985.8815106458787 735.0377864935627 860.1337754991073 546.4289587381037 885.9962595349372 0.6361674827107632 0.7524136792879925 1.002288439800515 0.8031970428782479 1.071618242661084 0.8231898671998663 1.112737779686984 0.8296172569389705 0.9708097141974333 0.6167395774615644 1.0 9.791156797853226 -4.664541507140705 0.7448238979665832 0.9754624118945372 2.1736637212263293e-12 0.16757788578173216 0.146818847351443 2.869839933090402 0.6051928031986323 0.013630876949047114 2.8851007140465654 2.1650029520262948e-05 4.664541507140705 -0.9754624118923635 ALDEGDIALLK ddPTM_A549_PD325901_60min_R1 2 ALDEGDIALLK 11 0 C9JLS9;P35998 C9JLS9 PSMC2 26S protease regulatory subunit 7 0 ; 142.92 7.7219e-11 2035060.0 2447.6 2969.4 2671.1000000000004 2691.0 2863.0 2930.0 3046.6 3262.2 3073.1000000000004 3020.3 3691.5 False True 2696.078550172113 3219.6417591102077 2852.3769086291427 2857.216958295577 2661.912756813809 2906.139051438404 3162.540030163488 3197.1328618536086 2943.9482939931213 2829.597742552378 3237.468902346533 0.8327735745100076 0.9944934935982229 0.8810515234792606 0.8825465338754768 0.8222203323356843 0.8976577502665802 0.9768557245048018 0.9875408716779677 0.9093363929640632 0.8740154200404742 1.0 11.660650619655591 -7.690783561260922 6.072596252200575 0.960156144413748 0.886248978214368 0.2563390527225584 0.0534233115066586 0.1919884846004692 12.477347667358114 0.007913764805812816 0.011738611511627446 2.0380575285563443e-08 7.690783561260922 -0.07390716619937998 ALDFIASK ddPTM_A549_PD325901_60min_R1 2 ALDFIASK 8 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;G3V2W4;G3V2X9;G3V5M4;A0A087WSZ2;Q08043;G3V2E8;O43707 P12814-4;O43707 ACTN1;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4 0 ; 163.9 0.00035895 25199000.0 13092.1 12638.0 13117.599999999999 13427.9 15744.3 15646.9 12491.5 14665.2 15007.099999999999 15371.7 15902.0 False True 14421.200354105376 13703.048613064859 14007.839218536788 14257.310886026457 14638.474682886368 15519.476834113155 12966.870868111084 14372.691081373157 14376.403775596034 14401.128238649275 13946.15481108345 1.0340628330501818 0.9825682274926859 1.0044230404931627 1.022311244866988 1.0496423481010486 1.11281403686838 0.9297810789971944 1.0305845070607367 1.0308507233958604 1.032623575008951 1.0 13.767579781197362 -10.950749672984553 1.153589878104606 0.9997229302117948 1.022141677135533 0.0 0.043357669278193255 1.6933677379571321 3.9234479008441907 0.030884007683825848 0.00683849751794109 1.1200833126228114e-11 10.950749672984553 0.02241874692373813 ALDIDS(ph)DEESEPK ddPTM_A549_MK2206_60min_R1 2 ALDIDSDEESEPK 13 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 ALDIDS(0.999)DEES(0.001)EPK;ALDIDS(1)DEESEPK 214.23 1.5145999999999997e-37 24962000.0 4209.9 5062.200000000001 3881.2 3513.6 5162.200000000001 4544.5 4509.1 4812.8 6165.8 5458.799999999999 5118.7 True False 4920.428197826963 5319.844357595598 4431.612521167013 4374.4321577315 4402.847218324989 5025.395973605042 5328.34510326421 5495.029138581848 4769.2561447593525 4225.653288698746 3847.585521066837 1.2788353035653004 1.3826448635040454 1.1517905182100385 1.1369291556431949 1.1443143223764372 1.3061167701378678 1.3848542349714414 1.428175958271674 1.239545194940062 1.0982610433379218 1.0 11.9097376786484 -10.269563036473503 0.8946995354534321 1.0139928415478126 1.2703381058416272 0.41755317841339035 0.09954878073823954 0.36306667977582807 0.5651864971619859 0.052319665987542285 0.02054846235403906 5.375724005218319e-11 10.269563036473503 0.25634526429381466 ALDIDS(ph)DEESEPKEQK ddPTM_A549_MK2206_60min_R1 1 ALDIDSDEESEPKEQK 16 1 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 ALDIDS(1)DEESEPKEQK 245.95 1.8713999999999995e-66 24767000.0 6848.7 7706.8 6150.0 6027.9 8477.8 5481.3 6273.7 5416.1 9130.9 9917.0 10085.0 True False 8004.59312536106 8099.043201595703 7022.162476856935 7504.735770602712 7230.726850473754 6061.327527807533 7413.550081911835 6183.848761110606 7062.765729051077 7676.742812344381 7580.616168159702 1.0559290891131194 1.068388508524348 0.9263313589667819 0.989990207144941 0.9538442113511086 0.7995824341122132 0.9779614107162447 0.8157448713844879 0.9316875531459152 1.0126805845398732 1.0 12.88809940306107 -5.7577429715144905 24.962277487315106 0.944964374292276 1.0621588484220232 0.3433562009382398 0.06690839256928664 81.04701102777425 547294.447419646 0.009216081534483545 0.03309830405794731 1.7468556885825697e-06 5.7577429715144905 0.11719447412974726 ALDIDS(ph)DEESEPKEQK ddPTM_A549_PD325901_60min_R1 2 ALDIDSDEESEPKEQK 16 1 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 ALDIDS(1)DEESEPKEQK;ALDIDS(1)DEESEPKEQK 241.8 5.4882e-66 119834000.0 13940.4 14117.0 15654.900000000001 14199.6 16655.5 16269.900000000001 16195.5 16522.300000000003 16680.5 15560.7 16410.1 True False 15355.619145619914 15306.689133615815 16717.335654561182 15076.677042368588 15485.67513835571 16137.403328668157 16811.82861501765 16192.749765006394 15979.476593001273 14578.194746394323 14391.761732194731 1.066972857900295 1.0635729953320703 1.1615906353677385 1.0475907899893648 1.076009694053916 1.1212945036859792 1.168156402798774 1.1251402063433837 1.1103210913542838 1.012954148190387 1.0 13.812955586410837 -10.582619514582568 0.8867078982473221 1.0003942344756451 1.1050778703008277 0.5011491801193477 0.03749427925292259 0.38445218130371334 0.543276490000138 0.02544107677748578 0.00713318745607959 2.614450871869879e-11 10.582619514582568 0.10468363582518259 ALDKLDGTEINGR ddPTM_A549_MK2206_60min_R1 1 ALDKLDGTEINGR 13 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 0 59.898 0.008490799999999998 2130200.0 946.19 1265.3 1226.2 948.9 1104.0 1024.5 835.77 991.17 1631.2 1589.6 1568.2 False True 1105.8837398755074 1329.6983654667367 1400.0935982312144 1181.3805425977391 941.6030624599562 1132.9119099919387 987.6185906178905 1131.6713828308198 1261.7358044911373 1230.5082559748537 1178.7726598818083 0.9381654134957548 1.1280363132956115 1.1877554051614985 1.002212371227029 0.7987995433779128 0.9610944913716714 0.8378363566023967 0.9600421025580019 1.0703809542186424 1.0438893756648824 1.0 10.203069789165761 -6.486775717676412 24.481681671669794 0.9907436960240786 1.0899896688208752 0.20049934160471372 0.09786512125720728 691.9969550379421 469246.6025273152 0.015044831666154728 0.034947792708428974 3.26005016025281e-07 6.486775717676412 0.09924597279679659 ALDKLDGTEINGR ddPTM_A549_PD325901_60min_R1 1 ALDKLDGTEINGR 13 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 0 50.675 0.028072000000000003 3034200.0 1039.3 1335.9 1077.5 1285.6 1369.8 1600.0 1455.7 1223.4 1483.0 1527.8 1576.1 False True 1144.8089709077774 1448.4809813414572 1150.625629533863 1365.0085921905586 1273.5899735534604 1586.97013047831 1511.0974600896052 1198.9983272612667 1420.674667271419 1431.3344472640204 1382.2496917210801 0.8282215418564078 1.0479155756134846 0.8324296517665958 0.9875267835950434 0.9213892259709429 1.1481066987993511 1.093215986330294 0.8674252810057481 1.0277988671514875 1.0355107733696243 1.0 10.432802534592044 ALDS(ph)NSLENDDLSAPGREPGHFNPESR ddPTM_A549_MK2206_60min_R1 2 ALDSNSLENDDLSAPGREPGHFNPESR 27 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 ALDS(0.965)NS(0.035)LENDDLSAPGREPGHFNPESR;ALDS(0.759)NS(0.241)LENDDLSAPGREPGHFNPESR 189.24 3.6814e-58 19987900.0 1046.71 1001.4300000000001 1420.32 1405.65 1092.17 1049.08 899.1700000000001 1015.99 1513.85 1428.52 1786.1599999999999 True False 1223.3690583974583 1052.398509546632 1621.742733191778 1750.034313102027 931.513239788851 1160.0929492770563 1062.5375499549973 1160.009693838882 1170.965392121694 1105.816339849772 1342.6071764918318 0.9111891250231978 0.7838469270635802 1.2079056045486916 1.3034596743887388 0.6938092214156418 0.8640598453438358 0.7913986820265306 0.8639978350703679 0.8721578527394518 0.8236335684866642 1.0 10.390821543689569 ALDSEVDPDPEGDLGMPAQPHS(ph)PTGEAQHR ddPTM_A549_MK2206_60min_R1 8 ALDSEVDPDPEGDLGMPAQPHSPTGEAQHR 30 0 Q6IA17-2;C9JFX4 Q6IA17-2 SIGIRR 1 ALDSEVDPDPEGDLGMPAQPHS(0.591)PT(0.409)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.809)PT(0.191)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.874)PT(0.126)GEAQHR;ALDS(0.001)EVDPDPEGDLGMPAQPHS(0.816)PT(0.183)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.846)PT(0.154)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.821)PT(0.179)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.885)PT(0.115)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.848)PT(0.152)GEAQHR 126.11 1.672e-21 47001900.0 3617.23 5062.200000000001 3708.98 4029.2 5632.210000000001 4737.76 4491.07 4751.77 6665.5 5738.759999999999 6705.09 True False 4227.729991217278 5319.844357595598 4234.969135514282 5016.354180877663 4803.719369943473 5239.1066185294385 5307.039285648312 5425.347949185312 5155.77489261628 4442.370130258082 5040.031101930186 0.8388301392819144 1.0555181605046546 0.840266468572468 0.9953022271939044 0.9531130409302012 1.0394988666881464 1.0529774873047648 1.0764512836255238 1.0229648961177575 0.8814172056511284 1.0 12.299216921256722 -6.862368143102189 1.7526193665984595 1.0213226112879228 0.9285101727748927 0.20500174253962733 0.07420874235945696 0.30749055935999786 1.908960386949142 0.008470506545261791 0.01934479011528992 1.3728777195137806e-07 6.862368143102189 -0.09281243851303012 ALDSEVDPDPEGDLGMPAQPHS(ph)PTGEAQHR ddPTM_A549_PD325901_60min_R1 5 ALDSEVDPDPEGDLGMPAQPHSPTGEAQHR 30 0 Q6IA17-2;C9JFX4 Q6IA17-2 SIGIRR 1 ALDSEVDPDPEGDLGMPAQPHS(0.818)PT(0.182)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.861)PT(0.139)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.839)PT(0.161)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.883)PT(0.117)GEAQHR;ALDSEVDPDPEGDLGMPAQPHS(0.862)PT(0.138)GEAQHR 131.53 2.3465e-27 31717900.0 3858.2700000000004 3988.0 4803.78 5003.92 5224.639999999999 4690.63 5099.08 5105.3 5246.08 5785.539999999999 6331.08 True False 4249.958730091747 4324.082755887217 5129.793398275802 5313.000773673138 4857.679310429515 4652.431064453417 5293.128279723644 5003.470786469628 5025.605501334621 5420.240017033567 5552.397296022777 0.765427706899869 0.7787776207917595 0.923888029761543 0.9568841151692945 0.8748796333268707 0.8379139345424702 0.9533050315969195 0.9011370259930159 0.9051235409495102 0.9761981587513784 1.0 12.438895086817237 -2.0000000000000004 0.09299141405239943 1.0552031154593726 0.365061079210489 0.5596636096291072 0.04888919073810028 75.39766085514408 0.486861742616931 0.44306038817701937 6.6555822340008355 0.00999999999999999 2.0000000000000004 -0.6901420362488836 ALDSNS(ph)LENDDLSAPGREPGHFNPESR ddPTM_A549_MK2206_60min_R1 2 ALDSNSLENDDLSAPGREPGHFNPESR 27 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 ALDS(0.17)NS(0.83)LENDDLSAPGREPGHFNPESR;ALDS(0.2)NS(0.8)LENDDLSAPGREPGHFNPESR 132.57 1.3792e-24 19191200.0 938.72 1404.27 1202.78 1174.08 1584.1399999999999 1451.64 1419.16 1549.63 1887.8 1547.88 1556.65 True False 1097.1529864994716 1475.7413448778734 1373.3522900673133 1461.7296527064539 1351.1151044975686 1605.2515812793542 1677.0030020954152 1769.2947980428414 1460.2163141971357 1198.2128329506527 1170.0908436455918 0.9376647911209428 1.26121946248206 1.173714244091023 1.2492445869862703 1.1547095781793906 1.3719033782692929 1.433224617731785 1.512100370369826 1.2479512356900555 1.024034022193903 1.0 10.192404826940209 -10.332590001753372 1.010361081844472 1.0181302207402692 1.2651928747140788 0.29818116464269273 0.14506919868030763 0.46520220019606656 0.9283367327069281 0.06795083956455049 0.02772666630163413 4.649540106489155e-11 10.332590001753372 0.24706265397380966 ALDSNS(ph)LENDDLSAPGREPGHFNPESR ddPTM_A549_PD325901_60min_R1 2 ALDSNSLENDDLSAPGREPGHFNPESR 27 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 ALDS(0.015)NS(0.985)LENDDLSAPGREPGHFNPESR;ALDS(0.021)NS(0.979)LENDDLSAPGREPGHFNPESR 183.59 7.7746e-58 39181000.0 3090.3 2968.0 3280.7 3394.3 3325.7 3522.6 3533.4 4353.1 2989.6 3505.3 3755.1 True False 3404.0249810413784 3218.123776196904 3503.348030451733 3603.9582019853888 3092.1143050421547 3493.9131135143084 3667.8654705506715 4266.274005559115 2863.9575086140467 3283.974759781761 3293.246505540151 1.033638075775642 0.977188853243488 1.0637976915964638 1.0943481442772458 0.938925859282129 1.060932762742352 1.1137536969614354 1.2954614840954246 0.8696456532470553 0.9971846183567515 1.0 11.685294789006562 ALDVSAS(ph)DDEIAR ddPTM_A549_MK2206_60min_R1 4 ALDVSASDDEIAR 13 0 C9JLK2;H7C393;H7C1U0;C9JIF9;P13798 C9JLK2 APEH Acylamino-acid-releasing enzyme 1 ALDVS(0.001)AS(0.999)DDEIAR;ALDVS(0.219)AS(0.781)DDEIAR;ALDVS(0.022)AS(0.978)DDEIAR;ALDVS(0.02)AS(0.98)DDEIAR 250.67 1.2068999999999998e-68 46614200.0 8736.5 9702.7 7718.400000000001 7790.37 11245.3 8176.7 8396.8 8748.1 12489.900000000001 12294.8 11772.5 True False 10211.007613082324 10196.525986417535 8812.985180710984 9699.010999723 9591.131266558828 9041.952966745821 9922.38987006031 9988.169964932647 9660.957592271863 9517.39614089056 8849.063345529008 1.1539082967737413 1.152271781574412 0.9959229397045448 1.096049448512924 1.0838583578910361 1.021797744426168 1.1212926704919115 1.1287262363173356 1.0917491733351716 1.075525823385503 1.0 13.111309041747635 -10.534594650635745 0.8098904651276617 0.9989497708261311 1.0920085839660214 0.0864005355727927 0.05147139084462257 0.5919733031025758 0.6870600429659355 0.03315603257635971 0.009016597792316297 2.9201512697457464e-11 10.534594650635745 0.09305881313989028 ALDVSAS(ph)DDEIAR ddPTM_A549_PD325901_60min_R1 2 ALDVSASDDEIAR 13 0 C9JLK2;H7C393;H7C1U0;C9JIF9;P13798 C9JLK2 APEH Acylamino-acid-releasing enzyme 1 ALDVS(0.083)AS(0.917)DDEIAR;ALDVS(0.198)AS(0.802)DDEIAR 266.78 1.0696999999999998e-82 39382000.0 4203.7 3833.2 3926.7999999999997 3926.7999999999997 4481.3 3757.46 3690.8 4106.4 3452.1000000000004 3879.7 3877.1000000000004 True False 4630.45652939962 4156.237216616568 4193.296261766657 4169.3495175901435 4166.548947645728 3726.860491541891 3831.255413683256 4024.494630591521 3307.020242001124 3634.7350798862562 3400.2412789618675 1.3618023397484755 1.2223359684303092 1.2332349141549503 1.2261922538811991 1.225368615287743 1.0960576576141514 1.1267598677153234 1.1835908985318375 0.9725839935131884 1.0689638709979965 1.0 11.73142140738132 -7.706779597976143 0.503261861214601 0.978192293113318 1.2933400913496738 0.7020262203114953 0.060073010608402436 0.287424286355966 0.14929474372278934 0.01578432421665215 0.03505097891267701 1.9643569240854505e-08 7.706779597976143 0.31514779823635575 ALDY(ph)YMLR ddPTM_A549_MK2206_60min_R1 2 ALDYYMLR 8 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 ALDY(0.939)Y(0.061)MLR;ALDY(0.932)Y(0.068)MLR 75.38 0.005128100000000001 2809800.0 1096.56 1220.23 1184.1799999999998 1043.57 1257.6399999999999 1234.48 914.41 1070.7 1843.43 1254.42 1471.01 True False 1281.6325196819719 1282.3344949762702 1352.1145303812098 1299.2446968476374 1072.6428219856339 1365.1118542184954 1080.546460685243 1222.475003881229 1425.8960483528065 971.0456507674728 1105.7176191893511 1.15909568359921 1.1597305430625267 1.2228389119570173 1.175023961181128 0.9700874828891975 1.234593562160398 0.9772354549956775 1.105594215616712 1.289566181823341 0.87820401331706 1.0 10.110767278362395 -11.173250742634057 1.5882019467580413 1.000244608130088 1.161400174768362 0.32632186987082656 0.10279299825605427 0.44412182242929144 2.016669968466664 0.07379531441439947 0.01569247378340518 6.710413111659681e-12 11.173250742634057 0.16115556663827402 ALDY(ph)YMLR ddPTM_A549_PD325901_60min_R1 1 ALDYYMLR 8 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 ALDY(0.939)Y(0.061)MLR 124.08 0.0011898 4661700.0 1363.1 1397.6 1051.1 1294.4 1325.3 1110.5 1277.0 1226.1 1258.0 1529.2 1748.7 True False 1501.4809085388156 1515.3806568776258 1122.4339667777667 1374.3521482043097 1232.2155000367939 1101.4564561851018 1325.5969338012126 1201.6444736431579 1205.1306348128414 1432.6460510250947 1533.6209859226285 0.9790430114879541 0.9881063644717738 0.7318848510034628 0.8961485013701072 0.8034680741509881 0.7182064318991201 0.8643575863717929 0.7835341878294961 0.7858073447578922 0.9341591333032084 1.0 10.58272626861657 -10.8471480664279 1.091577999920808 1.000078893302958 0.8332599039231942 0.2332066192851332 0.0867744826456748 0.4752734252645545 1.0045433804528738 0.060174230138245195 0.014687854822010807 1.4218439473302474e-11 10.8471480664279 -0.16681898937976392 ALEEGDGSVSGSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ALEEGDGSVSGSSPR 15 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 ALEEGDGSVSGSS(1)PR;ALEEGDGSVSGS(0.005)S(0.995)PR 213.29 1.6458e-45 190995000.0 14780.2 18534.2 14554.7 18507.5 22848.0 16414.9 16988.8 17197.3 29019.0 22432.0 24496.0 True False 17274.736418803797 19477.51161403113 16618.77531738368 23041.838330833245 19487.08946656257 18151.913822671242 20075.445053410876 19635.069939522426 22446.24283382068 17364.595620299395 18412.967144793263 0.9381831989902111 1.057814933403544 0.9025582453224038 1.2513919212281281 1.0583351022854046 0.9858223109795837 1.0902884307316933 1.066371855503731 1.219045396502971 0.9430634119829882 1.0 14.168434507060534 -6.234185098236353 24.94123229795762 1.098219010865169 0.9753484184906074 0.18459173010351915 0.09561403791899017 824.6883637310249 754697.0587163627 0.013631347999912556 0.03605435919177334 5.831964903638826e-07 6.234185098236353 -0.12287059237456166 ALEEGDGSVSGSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ALEEGDGSVSGSSPR 15 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 ALEEGDGSVSGSS(1)PR;ALEEGDGSVSGS(0.001)S(0.999)PR 285.9 1.0698e-106 268920000.0 18231.1 17305.4 16320.3 26134.5 19716.6 19527.2 18719.7 17489.3 31308.0 20694.0 19037.1 True False 20081.907850973534 18763.786791306586 17427.893699936434 27748.76870924405 18331.774034577415 19368.17695742252 19432.08842731289 17140.462191409573 29992.23363650274 19387.377308339866 16695.657386119783 1.202822230148839 1.1238722954932088 1.043857890521005 1.662035106944244 1.0979965394964228 1.160072736849798 1.1639007664033694 1.0266419461661682 1.7964092663663123 1.1612227575092604 1.0 14.027185279720355 ALEESESSQLIS(ph)PPLAQAIR ddPTM_A549_PD325901_60min_R1 2 ALEESESSQLISPPLAQAIR 20 0 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 ALEESESSQLIS(1)PPLAQAIR;ALEESESSQLIS(1)PPLAQAIR 149.09 3.3375e-21 4476800.0 1589.58 1234.44 1221.02 1238.39 1455.72 1663.78 1622.79 1468.2199999999998 1605.65 1395.91 1459.84 True False 1750.9529914130521 1338.470591067557 1303.8857597897334 1314.8825377122484 1353.4752491613679 1650.2307273045008 1684.546161474761 1438.9352003036925 1538.1701142982827 1307.772004372509 1280.2889346882193 1.3676233106235902 1.045444160925679 1.0184308592085585 1.02702015309728 1.057163904561099 1.2889518003265186 1.3157546830512816 1.1239144237813061 1.2014242040394292 1.0214663025975323 1.0 10.322253718013688 -10.852017241306767 1.0845265828874864 0.9995208630214123 1.1564486117886046 0.19651590619237747 0.11638258761938522 0.7157880207945637 1.4868260886581446 0.08525159177674656 0.02053080986154009 1.4059917057474385e-11 10.852017241306767 0.1569277487671923 ALEIIPR ddPTM_A549_MK2206_60min_R1 1 ALEIIPR 7 0 Q99832-3;Q99832;Q99832-2;Q99832-4 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 94.40700000000001 0.033311 2647400.0 514.2 745.01 611.98 643.2 645.79 630.45 602.96 624.54 915.2 747.55 803.49 False True 600.9843890169901 782.9278268050053 698.7679662742935 800.7840288743453 550.79514647284 697.1638005411596 712.510027159342 713.0704575735339 707.908661274086 578.677935803977 603.9612578041284 0.9950710931393819 1.296321273406775 1.1569748179127608 1.325886418254412 0.9119709904496377 1.1543187440133087 1.179728033797852 1.1806559582415976 1.1721093896782182 0.9581375101905111 1.0 9.238312197989808 -10.695523972925299 0.8295170108358232 0.99403867493378 1.1572861531782992 0.25454385111392275 0.11210783927288549 0.8132344087842072 0.9382518034127011 0.08515813142185984 0.019409750516817256 2.0159326887125228e-11 10.695523972925299 0.16324747824451924 ALEIIPR ddPTM_A549_PD325901_60min_R1 2 ALEIIPR 7 0 Q99832-3;Q99832;Q99832-2;Q99832-4 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 ; 93.262 0.033714 7548300.0 1850.24 2246.73 2274.1000000000004 2546.0 2411.3 2414.0 2515.3999999999996 2642.3 2457.4 2525.8 2541.5 False True 2038.0750027253023 2436.0698219996216 2428.434101274207 2703.26063761447 2241.938606533406 2394.3411843591502 2611.124923479694 2589.5972536557515 2354.124023838694 2366.3205569442753 2228.911611895898 0.9143812575823625 1.09294141992805 1.0895156579172722 1.2128164361417155 1.0058445541617629 1.0742198890168366 1.171479797379084 1.1618214198512145 1.0561764815053796 1.0616484495459637 1.0 11.122123691924719 -9.484961520127715 1.480253343880324 1.0146371927681204 1.09281242532946 0.06163256728769839 0.07896136869204867 0.47305853879080495 2.1197969631634135 0.018128712378974433 0.014535649409642176 3.2736969959038294e-10 9.484961520127715 0.07817523256133962 ALEIS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ALEISPR 7 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 ALEIS(1)PR;ALEIS(1)PR 93.14299999999999 0.012186 25890000.0 1162.08 1352.8899999999999 1337.12 1162.17 2212.21 1271.0700000000002 1201.52 1375.3200000000002 2739.5 2466.3 2091.4 True False 1358.2106938717689 1421.7463223395973 1526.7437221227551 1446.9017021717932 1886.7968394968675 1405.5737837320191 1419.8206312732057 1570.2758217408548 2119.0076240825597 1909.1611170802603 1572.0476602963995 0.8639755194290273 0.9043913605466237 0.9711815746317115 0.920393025424553 1.200216053972005 0.8941037980152632 0.9031664033681445 0.9988729104083202 1.3479283596802876 1.2144422623422881 1.0 10.618429241591274 -8.546844245073082 24.470161927026552 1.1647785656201863 0.9558788536328799 0.4498143444476872 0.11363751579658868 163.5464240842618 166989.4404594308 0.02466728914415822 0.027970815565583028 2.838936999338146e-09 8.546844245073082 -0.2088997119873064 ALEIS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ALEISPR 7 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 ALEIS(1)PR;ALEIS(1)PR 75.043 0.018311 34942000.0 2002.63 2862.45 2206.46 2330.8999999999996 2537.45 2532.19 2382.4700000000003 2676.3 2571.39 3079.83 2963.54 True False 2205.9355233417145 3103.6787072691473 2356.203644121844 2474.874399142015 2359.2282657272776 2511.5686841849197 2473.1361995876073 2622.9190969832653 2463.3234205495964 2885.369008192924 2599.0433674278856 0.8487490247324323 1.1941619544196633 0.9065657286256191 0.9522251264284394 0.9077294728106294 0.9663435076385299 0.9515563420687047 1.0091863528922214 0.9477808071311242 1.1101657803611016 1.0 11.343764991366067 -11.050557628607816 1.3283180124458833 1.0001532238888537 0.966362706524578 0.07240146862744723 0.08935790669917786 1.8222822234895015 5.689959877959177 0.05551539342299301 0.012126375489435418 8.901073175846945e-12 11.050557628607816 -0.03379051736427574 ALELDSNLYR ddPTM_A549_MK2206_60min_R1 1 ALELDSNLYR 10 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 79.148 0.0035474000000000005 1687500.0 1612.4 1715.0 1339.9 1807.8 2342.9 1327.6 1611.5 2164.0 2643.7 2303.3 2397.7 False True 1884.5337006048126 1802.2861746427352 1529.9179679253018 2250.711081155225 1998.262513620862 1468.0857508104423 1904.2886904061284 2470.753626972057 2044.906171121395 1782.9829302886756 1802.2849168464566 1.045635838700948 1.0000006978898102 0.8488768638214383 1.248809808103705 1.1087384103049127 0.8145691822019027 1.0565969190588094 1.37090068494567 1.1346187009651416 0.9892902690482731 1.0 10.81561138439798 -7.996942115787384 24.988778135521127 1.0943651516675712 1.0115618601555603 0.10486527101421095 0.14470498282381933 226.47451370934593 1850699.376853755 0.023379258858625348 0.032218007175214454 1.007065884996955e-08 7.996942115787384 -0.08280329151201093 ALELDSNLYR ddPTM_A549_PD325901_60min_R1 2 ALELDSNLYR 10 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 169.41 5.7805e-10 7621500.0 4465.4 3694.5 4151.9 3893.5 4471.8 4709.6 4416.799999999999 4394.4 4197.0 4655.4 4914.1 False True 4918.724120746265 4005.8484808488784 4433.672901402921 4133.992652219932 4157.716194872509 4671.246579062902 4584.883740965698 4306.750244659891 4020.6146854606523 4361.457249504465 4309.696853046482 1.141315570089174 0.9294965788642846 1.028766767729568 0.9592304965249827 0.9647351859408535 1.083892147950231 1.063852957018239 0.9993162840712316 0.9329228534063875 1.0120102174753647 1.0 12.073370677413157 -5.248486509758525 24.277966387754674 0.9840668202355242 1.1413157214989382 0.39424758597854126 0.048785644481707184 1045.1775752740655 1958957.3951715454 0.007191653666559742 0.1766410637903868 5.643044697403463e-06 5.248486509758525 0.15724890126341406 ALELPLAASS(ph)IPRPRTPS(ph)PESHR ddPTM_A549_PD325901_60min_R1 2 ALELPLAASSIPRPRTPSPESHR 23 2 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 ALELPLAAS(0.094)S(0.784)IPRPRT(0.178)PS(0.868)PES(0.077)HR;ALELPLAAS(0.385)S(0.436)IPRPRT(0.375)PS(0.713)PES(0.091)HR 135.41 8.9773e-23 40437000.0 4370.3 4130.9 3924.9 4673.5 4975.5 4697.799999999999 4423.4 4201.1 4184.799999999999 4887.6 5144.8 True False 4813.969638755186 4479.025440394811 4191.26731634103 4962.171480711402 4626.038044543171 4659.542674350624 4591.7349075773545 4117.305764800806 4008.927409034008 4578.996101876967 4512.022215574278 1.0669206419548793 0.9926869209407767 0.9289110549752861 1.0997666331480664 1.0252693412225102 1.0326949761610538 1.0176667330510765 0.9125189478431606 0.8884990404515912 1.0148434300858524 1.0 12.13955845572768 -8.239068016765817 18.584869394747574 0.9432635397591109 1.0219647858260463 0.28223542262836077 0.05224241157823643 29.35648439608279 24386.87999076071 0.00905351082557259 0.011671449620568805 5.766761405369264e-09 8.239068016765817 0.0787012460669354 ALELPLAASSIPRPRT(ph)PS(ph)PESHR ddPTM_A549_MK2206_60min_R1 3 ALELPLAASSIPRPRTPSPESHR 23 2 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 ALELPLAAS(0.005)S(0.007)IPRPRT(0.989)PS(0.884)PES(0.116)HR;ALELPLAAS(0.075)S(0.082)IPRPRT(0.852)PS(0.971)PES(0.019)HR;ALELPLAAS(0.117)S(0.121)IPRPRT(0.791)PS(0.83)PES(0.141)HR 116.34 1.6952000000000002e-15 25141800.0 1287.1999999999998 2045.1299999999999 2201.67 1842.6999999999998 2735.4300000000003 2328.521 1793.1299999999999 2214.9800000000005 3130.6400000000003 2922.94 3567.22 True False 1504.4478909814652 2149.2183815434964 2513.8999122636737 2294.161582721945 2333.051870602211 2574.923546672856 2118.918510349328 2528.9601980917596 2421.5550386047903 2262.6458239300073 2681.380823736504 0.5610720706523951 0.801534180642256 0.9375393043799554 0.8555896135353988 0.8700934421359451 0.9602975914046779 0.7902340807362882 0.9431559201529806 0.9031000062237908 0.8438360578625346 1.0 11.388760417633826 -4.837926675864299 1.1056695770522889 0.932730731821355 4.157071578290638e-16 0.6860992828657217 0.06376120794704823 1.4152429938099877 0.734066114297715 0.009550797559936274 1.9264975212030386 1.452356805640057e-05 4.837926675864299 -0.9327307318213546 ALELPLAASSIPRPRT(ph)PS(ph)PESHR ddPTM_A549_PD325901_60min_R1 1 ALELPLAASSIPRPRTPSPESHR 23 2 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 ALELPLAAS(0.041)S(0.044)IPRPRT(0.921)PS(0.933)PES(0.06)HR 53.262 0.0026576 6113400.0 206.84 412.21 435.48 267.37 375.86 391.05 417.49 286.24 384.97 422.77 439.92 True False 227.83824453243983 446.948383351121 465.0342915539736 283.884837658673 349.4608902466079 387.86541845221444 433.37781040929383 280.5307186490639 368.7910496692369 396.0762300496203 385.81262888264564 0.5905411784790031 1.1584597026943648 1.205337142282673 0.7358101223405612 0.9057787746831506 1.0053206904489205 1.1232857039034778 0.7271164748067233 0.9558812285053886 1.0266025536714523 1.0 8.591756557962592 -7.25966611989556 23.419837996387752 0.9713215147989341 0.9381882213464363 0.016147878987000985 0.1835894183588964 464.05431683315805 6128840.628895925 0.025977659106486972 0.043544264605017126 5.49963516370778e-08 7.25966611989556 -0.033133293452497825 ALELT(ph)GLK ddPTM_A549_MK2206_60min_R1 2 ALELTGLK 8 0 P19338 P19338 NCL Nucleolin 1 ALELT(1)GLK;ALELT(1)GLK 105.4 0.002106 7104900.0 1820.1100000000001 1825.97 1681.68 1816.2400000000002 2294.87 1915.1100000000001 2000.5500000000002 2055.37 2769.0 2623.3 2484.6 True False 2127.300070582873 1918.9040736515417 1920.167511232645 2261.218881534113 1957.2976629959073 2117.765669052868 2364.0240394613593 2346.7249918066327 2141.8259211843783 2030.6947080390246 1867.6052485284667 1.1390523089710882 1.0274677023763423 1.0281442037848165 1.210758474423749 1.0480253600369305 1.1339471607940215 1.265804988138705 1.2565422985696129 1.1468301038840927 1.0873254450527274 1.0 10.866973832764417 -4.348990388986323 16.314038150660693 1.102100875725426 1.0999381743847014 0.0 0.09117651455502004 0.0 0.0 0.013626669741014943 0.0 4.4772321226058276e-05 4.348990388986323 -0.0021627013407246043 ALELT(ph)GLK ddPTM_A549_PD325901_60min_R1 2 ALELTGLK 8 0 P19338 P19338 NCL Nucleolin 1 ALELT(1)GLK;ALELT(1)GLK 105.4 0.002106 8016900.0 2909.8999999999996 2429.8 2502.9 2943.7 3296.7 2917.1 3036.1000000000004 3257.8999999999996 3106.6 3381.7 2847.2 True False 3205.31090584484 2634.567773383841 2672.7618451603767 3125.525663372237 3065.1511649975855 2893.3441047614224 3151.6404469176678 3192.918628726891 2976.0404054925084 3168.1788848754672 2497.0124498878636 1.2836583598086524 1.0550879606155568 1.0703838682423894 1.2517060792038097 1.2275273858307099 1.1587223383252885 1.2621644906332776 1.2786955182663504 1.1918404354075836 1.2687877807808865 1.0 11.285987299098698 -10.479203924124494 0.876392663605518 1.003606577358185 1.1939664670919314 0.0 0.10745690794672602 0.40390002191174074 0.5729881985727123 0.0465687078139549 0.014534450127567178 3.317386522130918e-11 10.479203924124494 0.1903598897337464 ALELTGLK ddPTM_A549_MK2206_60min_R1 2 ALELTGLK 8 0 P19338 P19338 NCL Nucleolin 0 ; 119.27 0.0033948 8985700.0 6021.9 6205.7 6222.799999999999 6167.4 7392.4 6619.6 6523.3 6652.2 8565.599999999999 8960.3 7184.9 False True 7038.249498680303 6521.543623312198 7105.286611542331 7678.413276865111 6304.987752653065 7320.081678265147 7708.499171037111 7595.169721508091 6625.505276452476 6936.162006801381 5400.691036847854 1.3032127649331742 1.207538735102043 1.3156254566432992 1.4217464440155538 1.167440927398989 1.3553972312657154 1.4273171930116972 1.4063329432636935 1.2267884297116711 1.2843100928154028 1.0 12.39892830150279 -9.863507505130109 0.8316684141680319 1.0238481055274735 1.3204870556203676 0.14269155454970373 0.11315999820034803 0.24365482564939525 0.34792757843951866 0.03463722954583738 0.018041199433661472 1.369280725371703e-10 9.863507505130109 0.2966389500928941 ALELTGLK ddPTM_A549_PD325901_60min_R1 2 ALELTGLK 8 0 P19338 P19338 NCL Nucleolin 0 ; 133.55 0.0029863000000000003 22591000.0 11367.9 11090.0 12304.5 11348.7 13163.099999999999 12344.3 11518.7 11774.1 11867.0 12354.9 12728.0 False True 12521.960839394324 12024.59322035839 13139.557362969303 12049.683424232264 12238.569266229775 12243.772113539619 11957.050431774493 11539.256338897228 11368.27125860413 11574.80950549958 11162.536689439698 1.1217845179618273 1.077227654869367 1.1771121321733224 1.0794753701129467 1.0963967785035866 1.096862877514465 1.0711768090389744 1.0337485698760502 1.0184308078789177 1.036933613526208 1.0 13.446377296807322 -8.114619827610687 0.7998090176006726 1.0047669287790857 1.1158938601092898 0.6983973067370954 0.0264646529035738 0.1758776309500959 0.22574303358400807 0.004915024554426355 0.007223286782386732 7.680335158032101e-09 8.114619827610687 0.11112693133020413 ALENDFFNS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 ALENDFFNSPPR 12 0 F5H148;Q9NYV6-3;Q9NYV6;H3BMT1;Q9NYV6-2;A6NIE6 F5H148 RRN3;RRN3P2 RNA polymerase I-specific transcription initiation factor RRN3;Putative RRN3-like protein RRN3P2 1 ALENDFFNS(1)PPR;ALENDFFNS(1)PPR 138.02 1.8192e-08 16150400.0 2600.9 3117.0 3094.8999999999996 2695.5 4294.6 3535.8999999999996 3099.1000000000004 3236.1 5038.799999999999 4668.4 4655.9 True False 3039.868334100132 3275.6419862165626 3533.8033576625235 3355.8976210055926 3662.8700290222205 3910.066591059539 3662.166354599835 3694.8270851406082 3897.5198453101666 3613.80519765539 3499.7115336970483 0.8686053992823962 0.9359748524062549 1.0097413240026274 0.9589069238116512 1.0466205553669772 1.1172539660515954 1.046419488960329 1.055751895424776 1.11366888607327 1.0326008766321992 1.0 11.773020296418041 -5.510259840916474 0.762325265970207 1.0581306085257725 0.8014835900214974 0.7026236517173741 0.038625267796298705 1.006081563512313 0.5105713208369175 0.007841706057604418 0.20301152798948918 3.0884470437742665e-06 5.510259840916474 -0.25664701850427507 ALENDFFNS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 ALENDFFNSPPR 12 0 F5H148;Q9NYV6-3;Q9NYV6;H3BMT1;Q9NYV6-2;A6NIE6 F5H148 RRN3;RRN3P2 RNA polymerase I-specific transcription initiation factor RRN3;Putative RRN3-like protein RRN3P2 1 ALENDFFNS(1)PPR;ALENDFFNS(1)PPR 118.73 1.8942e-05 23526600.0 3962.0 4402.9 4314.2 4022.0 4719.6 4786.299999999999 4185.6 4912.4 4365.6 4916.299999999999 5460.9 True False 4364.219323329755 4773.947834978895 4606.987555392106 4270.429805375256 4388.111577736097 4747.321959692707 4344.885298448202 4814.41832829675 4182.129013782943 4605.883978978995 4789.243919497274 0.9112543434179201 0.9968061588059636 0.9619446478048043 0.8916709771223185 0.9162430754198706 0.9912466434140261 0.9072173753272278 1.0052564474106214 0.8732336636180227 0.9617142196972239 1.0 12.225582199561048 ALENDFFNS(ph)PPRK ddPTM_A549_MK2206_60min_R1 2 ALENDFFNSPPRK 13 1 F5H148;Q9NYV6-3;Q9NYV6;H3BMT1;Q9NYV6-2;A6NIE6 F5H148 RRN3;RRN3P2 RNA polymerase I-specific transcription initiation factor RRN3;Putative RRN3-like protein RRN3P2 1 ALENDFFNS(1)PPRK;ALENDFFNS(1)PPRK 190.19 6.270900000000001e-26 112782000.0 10813.6 15016.7 15555.8 16467.9 27623.0 21322.3 19603.6 20971.1 30484.0 30974.0 30278.0 True False 12638.67131286294 15780.98588848838 17761.846350811556 20502.536239272118 23559.693291966832 23578.61163340277 23165.32036689146 23943.817646300213 23579.422672944973 23976.951887622745 22759.136969711406 0.5553229601668505 0.6933912261036183 0.7804270598858645 0.9008485807944983 1.0351751616645584 1.036006403264849 1.0178470474394796 1.0520529701176902 1.0360420390423957 1.0535088355736884 1.0 14.474158230993408 -5.96443919592765 1.0681406417323398 1.024242769661066 0.5413903869699199 0.9745794575513615 0.026130513286148575 0.08204999952229082 0.13867654067790994 0.004155043443152672 0.03368415752217732 1.0853274919544781e-06 5.96443919592765 -0.48285238269114616 down ALENDFFNS(ph)PPRK ddPTM_A549_PD325901_60min_R1 2 ALENDFFNSPPRK 13 1 F5H148;Q9NYV6-3;Q9NYV6;H3BMT1;Q9NYV6-2;A6NIE6 F5H148 RRN3;RRN3P2 RNA polymerase I-specific transcription initiation factor RRN3;Putative RRN3-like protein RRN3P2 1 ALENDFFNS(1)PPRK;ALENDFFNS(1)PPRK 163.7 3.2010999999999997e-19 205450000.0 16719.5 16900.4 16757.800000000003 15516.900000000001 19845.2 18260.199999999997 18352.1 17842.8 17872.5 19075.1 19308.7 True False 18416.85133175463 18324.656019958966 17895.08508083765 16475.343671563234 18451.341614223325 18111.494985350015 19050.499208154455 17486.911356594188 17121.38097829295 17870.694930623074 16933.85230793404 1.087575998470576 1.0821315603049928 1.0567639752269034 0.9729235481665338 1.089612763752421 1.069543696023864 1.1249950018300738 1.0326599664744343 1.011074188374198 1.0553236561683068 1.0 14.047622591019213 -8.521438556499008 5.959253441371713 1.0058861093968103 1.0671214439679066 0.20962811181347196 0.03814816953814984 0.12273449478567174 17.265865004150555 0.005980357813469832 0.006969796234427405 3.009964985253857e-09 8.521438556499008 0.06123533457109631 ALES(ph)PERPFLAILGGAK ddPTM_A549_MK2206_60min_R1 2 ALESPERPFLAILGGAK 17 1 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 1 ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK 198.84 1.0334e-48 282901000.0 39927.6 43096.3 45025.8 38932.3 59081.5 49663.3 43632.4 44480.3 65823.0 63045.0 63318.0 True False 46666.40274390266 45289.717590819644 51411.135487880485 48470.71524773738 50390.689614789786 54918.63744216954 51559.84229306634 50785.51874020568 50914.19559773184 48803.090713345904 47594.39311210072 0.9805021073383091 0.9515767431711379 1.0801931094444268 1.0184122977169312 1.0587526454240703 1.1538888060368324 1.083317570026067 1.0670483521155274 1.0697519659051409 1.0253957981646766 1.0 15.538504005481512 -5.755035619665925 24.997804305143163 1.0503632239290646 0.9660393967460993 0.4343524737777593 0.04047119141998689 132.29211296900868 516402.3039317437 0.006501466850367183 0.02401091356665466 1.7577794397020404e-06 5.755035619665925 -0.08432382718296527 ALETIPIT(ph)PVER ddPTM_A549_MK2206_60min_R1 2 ALETIPITPVER 12 0 Q2LD37-7;Q2LD37-4;Q2LD37;H3BLT5;H0Y781 Q2LD37-7 KIAA1109 Uncharacterized protein KIAA1109 1 ALET(0.052)IPIT(0.948)PVER;ALET(0.002)IPIT(0.998)PVER 84.169 0.00053348 4345500.0 1120.55 1377.24 1202.58 1044.99 1532.01 1135.59 995.24 1187.78 1636.17 1745.23 1782.72 True False 1309.6714451827847 1447.3356333323386 1373.123927059937 1301.0125969113838 1306.6533584413744 1255.7573800563657 1176.0622254047757 1356.1514524236914 1265.5801074265962 1350.9813308851237 1340.0214234310029 0.9773511246032845 1.0800839509166709 1.0247029659751097 0.9708894008427562 0.97509885707335 0.9371173908855228 0.8776443457102167 1.012037142623727 0.9444476672516127 1.00817890465218 1.0 10.388040350442598 -6.247275909149289 4.2947299987565595 0.9662642659928908 1.0338947067888788 0.29661232737293497 0.04220782674079466 0.1848876284997367 8.522245137903223 0.005820528178403976 0.015395811994520529 5.658796690325596e-07 6.247275909149289 0.06763044079598801 ALETIPIT(ph)PVER ddPTM_A549_PD325901_60min_R1 2 ALETIPITPVER 12 0 Q2LD37-7;Q2LD37-4;Q2LD37;H3BLT5;H0Y781 Q2LD37-7 KIAA1109 Uncharacterized protein KIAA1109 1 ALETIPIT(1)PVER;ALETIPIT(1)PVER 176.05 5.7437e-16 12962600.0 3111.6000000000004 3149.0 2754.2 3698.2 3365.3 3370.2 3492.9 3521.8 4452.7 4746.6 4774.6 True False 3427.4873413611476 3414.377281416461 2941.1165743500364 3926.629414778412 3128.9329376547366 3342.7542085862474 3625.824220888218 3451.554936201349 4265.568503681351 4446.898865940178 4187.354468683126 0.8185328868131512 0.8154020174199016 0.7023806072178512 0.9377351366227401 0.7472338348844754 0.798297405578254 0.8658985638797609 0.8242805719017199 1.0186786276593447 1.061982905722017 1.0 12.031823335189678 -8.747235116920859 7.441356204443971 1.008927184486901 0.8128928084194089 0.719555372385597 0.05898316462335225 0.053617754810639164 14.983191267066825 0.009010202072911429 0.010025011415858823 1.7896367240723217e-09 8.747235116920859 -0.19603437606749208 ALGERVS(ph)IL ddPTM_A549_PD325901_60min_R1 2 ALGERVSIL 9 1 Q15139;F8WBA3 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 ALGERVS(1)IL;ALGERVS(1)IL 59.067 0.008367900000000001 8090000.0 1615.96 1902.8000000000002 1407.0500000000002 1119.92 2143.1 1380.88 1484.64 1357.3400000000001 1009.01 1310.27 1239.72 True False 1780.0110695931232 2063.15563387718 1502.5408742789994 1189.0949148771394 1992.576049293633 1369.6345711093052 1541.1387876261808 1330.266788887369 966.6048186267933 1227.5393285879234 1087.2422992325735 1.6371797444318883 1.8976042739814778 1.381974262167286 1.093679776547011 1.8326881236133716 1.2597326024530662 1.4174750087574672 1.2235237626666418 0.8890426902164018 1.129039340590757 1.0 10.086457775116566 -8.282191280783701 1.278634526767675 0.9442597872985604 1.5357042523017537 0.48469849353123007 0.22636712016806482 0.21923312740436895 0.6972614191591849 0.04104074540005979 0.05315305978252146 5.221661553365417e-09 8.282191280783701 0.5914444650031933 ALGHQLGR ddPTM_A549_MK2206_60min_R1 1 ALGHQLGR 8 0 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 72.138 0.019895 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALGLQRARS(ph)TTELR ddPTM_A549_MK2206_60min_R1 1 ALGLQRARSTTELR 14 2 Q9Y2N7-4;Q9Y2N7-3;Q9Y2N7;E9PNQ7 Q9Y2N7-4 HIF3A Hypoxia-inducible factor 3-alpha 1 ALGLQRARS(0.333)T(0.333)T(0.333)ELR 43.023999999999994 0.015356 6191700.0 946.35 1371.0 897.2 951.67 1105.5 919.09 803.54 1186.8 1144.4 1396.9 1446.3 True False 1106.0707439638827 1440.778043985534 1024.436451095291 1184.8291927220903 942.882414446995 1016.3474937574346 949.5328168097676 1355.0325344225673 885.1952272312759 1081.3393198108163 1087.1437941506576 1.0174097942839402 1.3252874658693672 0.942319182252834 1.089855085497453 0.8673023932253889 0.9348786234404867 0.8734197094429444 1.246415186025323 0.8142393232560775 0.9946608035008137 1.0 10.08632705979079 -6.14378112674787 1.6201327069129379 0.9347695268379316 1.1591612829848736 0.1453600343568694 0.13926460757972547 0.4074503465152228 1.977062777443749 0.01981280666811631 0.08340202291351252 7.181561323095871e-07 6.14378112674787 0.22439175614694207 ALGQAASDNS(ph)GPEDAKR ddPTM_A549_MK2206_60min_R1 1 ALGQAASDNSGPEDAKR 17 1 H3BUC9;A0A0G2JP90;A0A087WW46;A0A0G2JN29;A0A087X117;Q15155 H3BUC9 NOMO1 Nodal modulator 1 1 ALGQAAS(0.012)DNS(0.988)GPEDAKR 61.222 0.0026997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALGQNPTNAEVLK ddPTM_A549_MK2206_60min_R1 2 ALGQNPTNAEVLK 13 0 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VPF3;F8W1I5;P14649 G8JLA2 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B 0 ; 193.23 1.1025e-25 7973400.0 4848.0 5636.6 5080.5 4447.0 6957.8 5099.5 4689.3 4547.299999999999 7302.0 7436.5 7946.1 False True 5666.223877779789 5923.478864134832 5800.991294905959 5536.515199633418 5934.316836941927 5639.125705225859 5541.2851107176275 5191.893700522196 5648.108658897921 5756.5894851264475 5972.864068796611 0.9486611134147906 0.9917317380585009 0.9712243955477661 0.9269447849244112 0.9935462733772795 0.9441242325747433 0.9277433818838043 0.8692469208609059 0.9456281934164089 0.9637904728486919 1.0 12.544207173777247 -10.496655712563658 1.073841792373311 0.9969019928116679 0.9473901592291865 0.11122005679851299 0.03397354427346159 0.5252338821541679 1.1668686781911106 0.016717063566359602 0.006115734646800287 3.186722798699218e-11 10.496655712563658 -0.04951183358248146 ALGQNPTNAEVLK ddPTM_A549_PD325901_60min_R1 2 ALGQNPTNAEVLK 13 0 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VPF3;F8W1I5;P14649 G8JLA2 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B 0 ; 226.04 1.0634e-45 12456900.0 8652.5 8092.5 8175.4 8187.299999999999 9588.400000000001 8558.599999999999 9020.4 9409.3 9419.6 8353.2 8155.099999999999 False True 9530.895430366154 8774.483375631222 8730.231806673919 8693.010926292602 8914.943862184258 8488.901599194784 9363.676258152282 9221.62413004695 9023.726969541369 7825.777526433974 7152.074399438221 1.3326057445815698 1.2268445328701332 1.2206572973233694 1.2154530896624087 1.2464836583473609 1.1869146103767554 1.309225231058527 1.2893635629365499 1.2616936661411355 1.0941968846197505 1.0 12.804146028893369 -10.615430995217698 0.791361566276893 0.9916414531200567 1.2524134437624999 0.7157437033396769 0.04906511757377905 0.21529076143953418 0.22916798784301798 0.034382906554515896 0.008289458546528758 2.424203114092979e-11 10.615430995217698 0.26077199064244316 ALGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 ALGSPR 6 0 F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;H0Y7R3;E9PCD1;H0Y7J9;H0Y493 F8W9F9 WNK2 Serine/threonine-protein kinase WNK2 1 ALGS(1)PR 64.757 0.058204 23510000.0 3385.7 3395.1 3569.1 2928.7 4572.9 3556.3 3225.1 3473.9 4646.3 5127.8 5691.9 True False 3957.1233875823086 3567.8960883554237 4075.252048154482 3646.2316314743375 3900.2324676839976 3932.6253055191146 3811.058923629417 3966.3359633725627 3593.9204686164594 3969.426418588233 4278.444141551632 0.9248977564417161 0.8339237279516009 0.9525079475915608 0.8522330807273284 0.9116006516961395 0.9191718240109822 0.8907581348595773 0.927051010167944 0.8400064017928439 0.9277733417243283 1.0 12.062870539851914 -10.984191986045746 1.2373070284296284 1.000416236177159 0.8898353575386656 0.2270115075625272 0.042026213395059867 0.27648288205706534 0.7483583005862866 0.02594093689388856 0.0058614800326009285 1.0370698630039983e-11 10.984191986045746 -0.11058087863849331 ALGS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 ALGSPTK 7 0 Q5TBR0;Q5TBR1;Q9NR45 Q5TBR0 NANS Sialic acid synthase 1 ALGS(0.984)PT(0.016)K;ALGS(0.798)PT(0.202)K 78.334 0.016821 58251000.0 5672.299999999999 7388.1 6658.1 6280.4 8323.8 6659.0 6092.1 6722.8 8838.0 8792.2 9614.099999999999 True False 6629.645565579679 7764.122732873468 7602.318697099371 7819.098281937867 7099.380046471185 7363.650960113546 7198.955712580316 7675.777487711528 6836.207111385898 6806.035913551901 7226.653634338535 0.9173880333876689 1.0743731643621424 1.051983266636138 1.0819804957559114 0.9823883094019353 1.0189572287128923 0.9961672548374799 1.0621482467678973 0.9459713246671501 0.9417963358880236 1.0 12.819112033809914 -8.767107218890166 24.9996366258445 0.974486459976677 1.0254002574183427 0.2346750580476572 0.04729231586797658 162.31297590095198 715926.2915117604 0.007928449649135364 0.008550993024028493 1.7095931975606579e-09 8.767107218890166 0.05091379744166569 ALGS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 ALGSPTK 7 0 Q5TBR0;Q5TBR1;Q9NR45 Q5TBR0 NANS Sialic acid synthase 1 ALGS(0.719)PT(0.281)K 80.676 0.01576 241060000.0 7168.6 7309.4 6303.0 5829.3 7833.7 7392.8 6637.4 7046.4 6705.1 6483.4 7605.2 True False 7896.350994755602 7925.388790341533 6730.75948301804 6189.362621699149 7283.487936797878 7332.595487875025 6889.989889124645 6905.8540242061335 6423.307964613343 6074.037017536035 6669.8086133349125 1.1838946891172364 1.1882483066300202 1.0091383236336449 0.9279670498078145 1.0920085356326477 1.09937119833019 1.0330116332497945 1.0353901325443278 0.9630423205504365 0.9106763581480052 1.0 12.703429649287235 -2.0000000003140697 0.4361479129718744 0.9925171697667827 5.506122483301395 0.48584725980192944 0.06367117732721365 41.94343307037669 0.45922547483491377 0.012770027876622287 168.78621933390642 0.009999999992768278 2.0000000003140697 4.513605313534612 ALGSPT(ph)K ddPTM_A549_MK2206_60min_R1 2 ALGSPTK 7 0 Q5TBR0;Q5TBR1;Q9NR45 Q5TBR0 NANS Sialic acid synthase 1 ALGS(0.47)PT(0.53)K;ALGS(0.386)PT(0.614)K 80.165 0.016947 202259000.0 13183.3 16095.4 13394.0 11846.1 17643.6 14775.0 13376.6 14413.3 19256.3 18369.5 18729.1 True False 15408.318739260369 16914.587110988155 15293.470604068576 14748.39503179164 15048.249812335593 16338.480693148756 15806.95507048502 16456.42941388 14894.77879599232 14219.817191828179 14078.147573136323 1.094484814796391 1.201478179079773 1.0863269137234584 1.0476090661199113 1.068908372650561 1.1605561462024707 1.1228007796031048 1.1689342882924365 1.0580070082809958 1.010063086635218 1.0 13.78116989371874 -9.191400060729718 1.7730619527574858 1.0186650430897661 1.1175132185459487 0.47587024237692344 0.044960072973508396 0.20541464121513114 1.333838245378542 0.00984241869911094 0.009065801804373327 6.435761468429444e-10 9.191400060729718 0.09884817545618252 ALGSPT(ph)K ddPTM_A549_PD325901_60min_R1 1 ALGSPTK 7 0 Q5TBR0;Q5TBR1;Q9NR45 Q5TBR0 NANS Sialic acid synthase 1 ALGS(0.45)PT(0.55)K 84.522 0.014856 239510000.0 5185.8 5600.8 5357.9 5307.7 6125.7 5512.9 5837.3 5909.8 6037.2 5402.3 6512.4 True False 5712.258598415813 6072.799072009307 5721.519313670051 5635.544574338698 5695.45196451776 5468.004770196168 6059.441645793128 5791.924402851588 5783.477478928533 5061.197856037717 5711.416085504958 1.0001475138386422 1.0632737977927236 1.0017689532707543 0.9867158144266858 0.9972048751573689 0.9573816175069882 1.0609350737326646 1.0140960343531882 1.0126170799578864 0.8861546384061505 1.0 12.479632775652465 ALGVISNFQS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 ALGVISNFQSSPK 13 0 E9PC87;O94876;Q6N039;O94876-2 E9PC87 TMCC1;DKFZp686H13261 Transmembrane and coiled-coil domains protein 1 1 ALGVISNFQS(0.631)S(0.369)PK 94.191 0.00017332 24570000.0 3808.3 4045.6 4481.9 4163.8 5230.6 4361.2 3934.9 4628.8 4857.6 4723.1 4677.7 True False 4194.915812477718 4386.536910034435 4786.068685854128 4420.988469324091 4863.2207005903965 4325.68383315125 4084.644772759902 4536.474952776645 4653.451964759034 4424.882659950709 4102.3725543834125 1.0225584724126096 1.0692682958175974 1.1666587133194866 1.0776662554940886 1.1854653949929566 1.0544346657470756 0.9956786514660722 1.1058174002089087 1.13433187821686 1.0786155087798384 1.0 12.002242799872127 ALGVISNFQSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 ALGVISNFQSSPK 13 0 E9PC87;O94876;Q6N039;O94876-2 E9PC87 TMCC1;DKFZp686H13261 Transmembrane and coiled-coil domains protein 1 1 ALGVISNFQS(0.422)S(0.578)PK 140.82 2.8044e-12 4400900.0 2620.4 2777.4 2720.9 3589.6 3959.3 2880.2 2660.4 3006.9 4526.3 4093.3 3973.5 True False 3062.6594573709067 2918.757796765441 3106.764533866672 4469.05216114327 3376.8922148529964 3184.9808522779745 3143.760243224614 3433.1372832450443 3501.1002770158357 3168.6206870796864 2986.7702869789346 1.0254084389157134 0.9772287508985879 1.040175251311044 1.496282516478238 1.1306166495544803 1.066362842218953 1.0525617778274043 1.1494480503613158 1.1722027275680236 1.0608852983751524 1.0 11.544370568651523 -10.902958380351071 1.1204761688077054 0.9990327261453639 1.1285128626746268 0.06185398537766351 0.13200055576065586 0.9628493940435376 2.12071869383257 0.0980512555853944 0.022660366594490732 1.2503788517616293e-11 10.902958380351071 0.12948013652926293 ALGVSNFSHFQIEK ddPTM_A549_PD325901_60min_R1 2 ALGVSNFSHFQIEK 14 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 136.51 4.1632e-09 11311100.0 4913.7 4674.5 5073.5 4865.2 6002.8 6110.5 5953.5 5866.5 6071.1 6342.2 6710.9 False True 5412.535206725246 5068.436520159175 5417.818219433923 5165.712354329116 5581.184036535776 6060.738113929814 6180.063700380207 5749.488055319783 5815.952779818957 5941.752409633378 5885.501843900134 0.9196386901713265 0.8611732108133169 0.9205363218174966 0.8777012549376696 0.9482936518523463 1.0297742273602886 1.0500487238459304 0.976890027021006 0.9881829849134686 1.009557479926974 1.0 12.522949720628928 -6.98796180520333 4.1367450197634845 0.9995475230051596 0.8948473163246902 0.815567997387134 0.02521907921865559 0.06955930226757223 2.7872552538186106 0.0036717955712267263 0.006926148674671295 1.0281067128146091e-07 6.98796180520333 -0.10470020668046942 ALHSFIT(ph)PPT(ph)TPQLR ddPTM_A549_PD325901_60min_R1 2 ALHSFITPPTTPQLR 15 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;J3QR75 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 2 ALHS(0.019)FIT(0.98)PPT(0.622)T(0.379)PQLR;ALHS(0.085)FIT(0.915)PPT(0.627)T(0.373)PQLR 75.97 0.0018161999999999998 12417800.0 1471.79 1488.1299999999999 1277.31 1056.62 1529.7800000000002 1586.8 1435.25 1347.1 1398.1200000000001 1680.15 1566.24 True False 1621.205037325467 1613.5399376926891 1363.9959376890017 1121.8850176418703 1422.3335302544983 1573.8776269018624 1489.8692241489357 1320.2310337204942 1339.3618784932683 1574.0650422638064 1373.6024092133907 1.1802578580608845 1.1746775681739678 0.9930063667186706 0.816746541879124 1.0354768750507755 1.1458029021681475 1.0846437179752229 0.961144960772557 0.9750724587475565 1.1459393429320008 1.0 10.42374875951457 -5.759202159579396 10.924305360553845 0.9950797116044787 1.1776354328186913 0.2965276212259905 0.08971055336628629 0.0702975876778007 188.89982379191625 0.01091769420732515 0.03805224582918682 1.7409962690263553e-06 5.759202159579396 0.1825557212142126 ALHSFIT(ph)PPTT(ph)PQLR ddPTM_A549_MK2206_60min_R1 1 ALHSFITPPTTPQLR 15 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;J3QR75 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 2 ALHS(0.014)FIT(0.98)PPT(0.26)T(0.746)PQLR 61.87 0.014308000000000001 2774300.0 222.63 383.28 267.61 145.9 230.06 357.68 357.5 232.59 389.43 471.19 493.4 True False 260.20450121908283 402.78731487875643 305.5611220214119 181.6455065496999 196.21847875863918 395.52946019123186 422.45312244504584 265.56034477700103 301.224726791922 364.7478517443328 370.8751628527513 0.7015959203566077 1.0860455355935366 0.8238921141848717 0.48977533343697827 0.5290688037703508 1.0664760000341922 1.1390709455860017 0.7160370156209046 0.8121997830076245 0.9834787774374333 1.0 8.534789844973506 -7.274221062933776 24.97923535896791 0.9216553277016696 0.7383803287225517 0.26667286010617075 0.18280995274097736 1061.607911291669 2074696.910160762 0.029459118392193246 0.04727045418146304 5.3183747645646626e-08 7.274221062933776 -0.18327499897911792 ALHSFIT(ph)PPTTPQLR ddPTM_A549_MK2206_60min_R1 2 ALHSFITPPTTPQLR 15 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;J3QR75 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 ALHSFIT(0.999)PPTTPQLR;ALHSFIT(0.999)PPTTPQLR 104.44 5.0156e-06 32146000.0 2362.75 2390.5299999999997 1853.44 1861.92 2599.2 2652.6000000000004 2221.3 2100.02 3132.5 2920.5 3185.0 True False 2761.524436308621 2512.197766220816 2116.2856619684085 2318.090483584765 2216.8611231394198 2933.296371346626 2624.8814570270756 2397.7042660415227 2422.993751574601 2260.75702162466 2394.0765984718555 1.1534820724079204 1.0493389258407009 0.8839673982525197 0.9682607837461873 0.9259775249273341 1.225230793876418 1.096406630724574 1.001515267962597 1.0120786248531912 0.9443127354687424 1.0 11.225253596704409 -5.329286015725605 4.143658757368166 1.0112374264084207 1.1572295749526795 0.19003104927525716 0.08710508034030234 0.2536129425927698 7.684165094199117 0.011516002104177001 0.0908375720741972 4.685047347610471e-06 5.329286015725605 0.1459921485442588 ALHSFIT(ph)PPTTPQLR ddPTM_A549_PD325901_60min_R1 3 ALHSFITPPTTPQLR 15 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;J3QR75 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 ALHSFIT(1)PPTTPQLR;ALHSFIT(1)PPTTPQLR;ALHSFIT(0.805)PPT(0.097)T(0.097)PQLR 121.27 4.5736000000000007e-07 50027400.0 7186.200000000001 6370.5 6447.4 6900.8 8193.7 7448.6 6728.1 7596.9 7737.6 7691.6 8910.7 True False 7915.737733799167 6907.364392271695 6884.959335365783 7327.046743146087 7618.202778730464 7387.941071175455 6984.141527257587 7445.3738698472425 7412.415580228817 7205.951063343332 7814.740389581267 1.0129239538593695 0.8838891694317447 0.881022144324195 0.9375931096718989 0.9748503979591145 0.945385349080204 0.8937138252946896 0.9527346397550878 0.9485171881219707 0.9220973063865843 1.0 12.931982231478223 -10.19155979863437 0.4629241180219896 1.0079496172585982 0.9296339020998221 0.0 0.04391586865100054 1.2087066277615832 0.4483188391172116 0.041741901035556965 0.010654358448348632 6.43339476551941e-11 10.19155979863437 -0.07831571515877611 ALIAQLPS(ph)PAIDHEQLR ddPTM_A549_MK2206_60min_R1 2 ALIAQLPSPAIDHEQLR 17 0 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 ALIAQLPS(1)PAIDHEQLR;ALIAQLPS(1)PAIDHEQLR 55.206 0.0035128 4419000.0 614.9 712.1400000000001 895.75 532.28 1131.54 666.52 740.04 748.9300000000001 1247.45 820.31 1099.94 True False 718.6800871383646 748.3848842041266 1022.7808192918042 662.6886238949568 965.0919649419743 737.0507039998315 874.4956887670811 855.0931210019324 964.9045667683108 635.0014012699623 826.7945412003548 0.8692366136029057 0.9051642783195064 1.237043507576759 0.8015154804153083 1.1672693962648046 0.8914556969979124 1.057694076568857 1.0342268585379062 1.1670427399864607 0.7680280524688228 1.0 9.691385053369755 -7.976092027277312 24.45835577157901 1.0762231299382636 0.986466528645096 0.0 0.15663257999294408 325.22155299304285 332707.1593088641 0.019256487929570524 0.026605914274106825 1.056593592635252e-08 7.976092027277312 -0.08975660129316765 ALIAQLPS(ph)PAIDHEQLR ddPTM_A549_PD325901_60min_R1 2 ALIAQLPSPAIDHEQLR 17 0 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 ALIAQLPS(1)PAIDHEQLR;ALIAQLPS(1)PAIDHEQLR 61.181000000000004 0.0010629 6037500.0 1197.1599999999999 1887.17 1737.56 1587.33 2061.97 1336.78 1548.27 1537.17 1567.17 1741.48 1640.56 True False 1318.6948018973874 2046.2084389236904 1855.4812703970842 1685.375769012011 1917.1443406103283 1325.8937068879968 1607.1902620958524 1506.509938463463 1501.307294880478 1631.5226555971647 1438.7815203666878 0.9165358209224879 1.4221814847901257 1.2896198930357379 1.1713910313377365 1.3324777344385998 0.9215392942703904 1.1170495584946378 1.0470734556553896 1.043457448979366 1.1339613641836008 1.0 10.490631819468653 -7.259997773187913 24.99871686078763 1.0250696670442034 1.2377672395593653 0.3218880397321934 0.12994748761830804 92.78519043260596 1608970.8350018512 0.016797714901833162 0.028103640438782204 5.495436915940878e-08 7.259997773187913 0.21269757251516186 ALIQTCLNSPDS(ph)PPRSDPTTDQR ddPTM_A549_PD325901_60min_R1 1 ALIQTCLNSPDSPPRSDPTTDQR 23 1 P11831 P11831 SRF Serum response factor 1 ALIQTCLNS(0.039)PDS(0.953)PPRS(0.007)DPTTDQR 104.01 1.0347e-10 5858500.0 3223.7 3733.3 3704.9 3229.6 4139.5 4016.7 2907.8 3246.0 3353.3 3729.1 4760.5 True False 3550.9676508374914 4047.918293017491 3956.336793373558 3429.0850570462285 3848.75580049974 3983.989326932641 3018.4579202092136 3181.255983562263 3212.372462414867 3493.643989587812 4174.988679295859 0.850533480113864 0.9695638968056318 0.9476281487883752 0.8213399653156827 0.9218601764325886 0.954251528079489 0.7229858933936794 0.7619795472352764 0.7694326162715863 0.8368032246202497 1.0 12.027556570309647 -3.9442209495837037 13.22591185684723 0.8794084818396564 0.847810197874417 0.0 0.09100502590884443 0.0 0.0 0.01422757598881675 0.0 0.00011370486592080608 3.9442209495837037 -0.03159828396523934 ALIRS(ph)PSLAK ddPTM_A549_PD325901_60min_R1 2 ALIRSPSLAK 10 1 Q5SW96 Q5SW96 LDLRAP1 Low density lipoprotein receptor adapter protein 1 1 ALIRS(0.907)PS(0.093)LAK;ALIRS(0.977)PS(0.023)LAK 60.518 0.0022223000000000004 6912200.0 4153.4 3751.9 3747.2000000000003 3622.5 4288.1 3809.1 3536.1 3208.3999999999996 4555.4 4046.8 5235.2 True False 4575.050110428521 4068.085780294196 4001.5075257441204 3846.2535977055854 3986.9186491419146 3778.07995250308 3670.6682205281672 3144.405945058889 4363.952379830221 3791.284357368791 4591.303588667088 0.9964599426013375 0.8860415569851724 0.8715406089941893 0.8377258274097706 0.8683631069361211 0.8228773984427162 0.7994827938602526 0.6848612565765334 0.9504822095846487 0.8257533583113479 1.0 12.16468811453066 -8.976143738651869 24.447601229865153 0.978154062003155 0.8444822346508278 0.07367112137398069 0.08412452699649692 91.61380006085213 93885.89057258835 0.012781855994259662 0.013209452704910845 1.0564677916947262e-09 8.976143738651869 -0.1336718273523272 ALIVLAHSER ddPTM_A549_MK2206_60min_R1 3 ALIVLAHSER 10 0 B4DLR8;P15559-3;P15559-2;P15559;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ;; 101.97 0.00044161 32589640.0 5456.4 5501.7 5666.1 4739.3 7174.4 6146.1 5137.5 5379.5 7484.299999999999 8338.4 8131.6 False True 6377.306923827892 5781.713030339322 6469.638180507166 5900.4287127552625 6119.05526387021 6796.476222549011 6070.917249122855 6142.060599027807 5789.117999971198 6454.749648729695 6112.299299257056 1.04335645419115 0.9459145809568068 1.0584622682487985 0.9653370072163275 1.0011053065765243 1.1119344603061432 0.9932297081493978 1.0048690841717074 0.9471260677098812 1.056026436649505 1.0 12.577499473811578 -8.489057532774991 3.2922138365558693 0.9750777747770313 1.0166333995012116 0.0 0.05051205136090627 0.3578185430150236 7.927349386506665 0.007566553801266241 0.008976247507971921 3.242966535930415e-09 8.489057532774991 0.041555624724180285 ALIVLAHSER ddPTM_A549_PD325901_60min_R1 2 ALIVLAHSER 10 0 B4DLR8;P15559-3;P15559-2;P15559;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 116.12 8.9516e-05 54974000.0 7644.6 8041.299999999999 8836.3 8496.7 11275.7 9391.3 8382.4 8228.1 9644.599999999999 9861.0 10276.7 False True 8420.674164342925 8718.968571944803 9435.984454988462 9021.521861594212 10483.733731053253 9314.820366475593 8701.39681902528 8063.984090680417 9239.271001999949 9238.374777111214 9012.731049368716 0.9343088258395039 0.967405831172063 1.0469617259520234 1.00097537718338 1.1632138664325915 1.033518066327746 0.9654561720927817 0.894732578450263 1.025135550078031 1.0250361101986176 1.0 13.137748624258904 -5.564318896067452 5.622021570653152 1.01370833868557 0.9415520217142705 0.1558720220637846 0.06106135426474754 0.2351196250219211 18.086303384469247 0.008448725063878242 0.03553221024781853 2.7269746699713336e-06 5.564318896067452 -0.07215631697129954 ALKDEEK ddPTM_A549_MK2206_60min_R1 1 ALKDEEK 7 1 P06753-2;P06753-3;P06753-6;A0A087WWU8;J3KN67;P06753-5;A0A2R2Y2Q3;P06753-4;P06753;A0A494C0P6;P06753-7 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 47.082 0.060992 2288300.0 2611.9 3153.7 2448.8 2204.7 1238.5 1179.5 911.76 1263.6 1375.4 3655.6 3801.9 False True 3052.724865175955 3314.20985945819 2796.076662329634 2744.851598972745 1056.3182906310296 1304.3139071112662 1077.4149899873978 1442.719169612704 1063.8740960624752 2829.797421075538 2857.783302898004 1.0682142561615031 1.1597134940558074 0.9784075158862483 0.9604827616528034 0.3696285472589348 0.4564075609891748 0.37701073727137363 0.5048385467679372 0.3722724865050573 0.9902071364913896 1.0 11.48068081002271 -6.602315053558473 6.520747568734271 0.6188207343060909 1.0606955005457768 0.5076892208860184 0.21766175418308248 0.17788691099190784 11.754187084498112 0.039078150118828384 0.08195709519647297 2.498532174846475e-07 6.602315053558473 0.4418747662396859 ALKEPPRDR ddPTM_A549_MK2206_60min_R1 2 ALKEPPRDR 9 2 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 ; 38.303000000000004 0.040263 10144100.0 4189.4 4894.9 4108.7 3914.8 6058.7 4456.7 4302.9 4588.2 6405.9 6412.1 6661.9 False True 4896.468299003845 5144.029502191678 4691.375442058875 4873.926175742049 5167.473255911358 4928.305035881968 5084.681232360241 5238.591400773192 4954.973878120264 4963.602156603146 5007.566370913542 0.9778139591808486 1.0272513874345794 0.9368573663464027 0.9733123467024336 1.031933053534075 0.984171685573263 1.015399668368775 1.04613519077881 0.9894973947627012 0.9912204430148419 1.0 12.28989392248804 ALKEPPRDR ddPTM_A549_PD325901_60min_R1 1 ALKEPPRDR 9 2 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 65.347 0.0019531 8856100.0 2591.0 2377.9 2634.5 2706.3 3186.9 2980.3 2871.4 2834.8 2670.9 3491.7 3097.8 False True 2854.0364126066115 2578.293978240775 2813.2930125354646 2873.462004546756 2963.063138208149 2956.029424915314 2980.672698290371 2778.2576901424204 2558.651361304945 3271.2334661027517 2716.7902385721477 1.0505177661807985 0.9490221002839874 1.0355208777597917 1.057667965583147 1.0906484778027743 1.0880594986490022 1.097130229626013 1.022625026657405 0.9417920180137591 1.2040802486915592 1.0 11.407687465071428 -8.565449916415398 6.32183054505951 0.9727570607192394 1.0516650989911431 0.0 0.08032267571352592 0.14560803240524786 14.811648326241386 0.007708923090840328 0.008781538746207327 2.719882129486236e-09 8.565449916415398 0.07890803827190374 ALKYS(ph)PDKPVSVK ddPTM_A549_MK2206_60min_R1 2 ALKYSPDKPVSVK 13 2 Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3 1 ALKY(0.054)S(0.932)PDKPVS(0.015)VK;ALKY(0.002)S(0.998)PDKPVSVK 67.605 0.00088105 19867800.0 7135.8 7687.9 7950.6 7213.1 9874.5 7991.7 8000.2 7336.900000000001 10606.3 10813.6 11848.8 True False 8340.148586439973 8079.181272324129 9078.11463227622 8980.309823808362 8421.974130671051 8837.376389538878 9453.732783733853 8376.928043313901 8203.989984780746 8370.800249628637 8906.415949756141 0.936420287744177 0.9071192405453888 1.019278089355885 1.0082967014418682 0.945607546086105 0.9922483341664328 1.0614519731691507 0.9405498340264764 0.9211325892549822 0.9398618138711375 1.0 13.120629275135636 -5.737761224162955 24.917166531567382 0.973847313544741 0.9217697357384159 0.22457870898769283 0.04069531963618117 309.78161515913877 325986.1142012375 0.006166927751473979 0.02385622481414166 1.8291055850696134e-06 5.737761224162955 -0.05207757780632505 ALKYS(ph)PDKPVSVK ddPTM_A549_PD325901_60min_R1 2 ALKYSPDKPVSVK 13 2 Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3 1 ALKY(0.124)S(0.873)PDKPVS(0.003)VK;ALKY(0.015)S(0.985)PDKPVSVK 60.474 0.0026558000000000003 13026500.0 6700.0 6132.200000000001 7248.1 6633.8 7363.5 7443.299999999999 6332.8 7368.2 7209.400000000001 7011.5 7684.8 True False 7380.179067720689 6648.98201495777 7739.99965236602 7043.554759547088 6846.313162695941 7382.6842326182505 6573.798169441128 7221.235470758923 6906.413989363838 6568.792693409924 6739.618317960892 1.0950440691949455 0.986551715731204 1.1484329359927015 1.0450969813492574 1.0158309921573319 1.0954157764310786 0.9753962107797918 1.07146059762977 1.0247485337498177 0.9746535164913237 1.0 12.718451174826326 -8.431616394431995 0.244949486004815 0.990839169372229 1.0788244263512687 0.2427541574678731 0.04736322951437146 2.245478615313334 0.4820847401175529 0.05974839685626588 0.07076905415515992 3.7015498757612935e-09 8.431616394431995 0.0879852569790397 ALKYSPDKPVS(ph)VK ddPTM_A549_PD325901_60min_R1 1 ALKYSPDKPVSVK 13 2 Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3 1 ALKYS(0.348)PDKPVS(0.652)VK 68.44 0.00078963 14063000.0 4656.4 5452.4 4831.3 5155.5 6208.6 5234.5 5787.3 5887.4 5136.2 5331.8 6146.7 True False 5129.114300139495 5911.892883199461 5159.181070967007 5473.943526009981 5772.529354507238 5191.871967492944 6007.538868432076 5769.971188424046 4920.34337561663 4995.149238069318 5390.694867141654 0.9514755382285515 1.0966847556582562 0.9570530698025941 1.0154430293162686 1.0708321462772845 0.9631173893999063 1.114427549043876 1.070357594082022 0.912747520845226 0.9266243705457459 1.0 12.396255534776422 -8.758124749618029 24.991286180578477 0.95879744080193 1.031191037188272 0.2908836518321054 0.05713585643713742 89.61798532147563 675691.528383258 0.009832224357663068 0.010923348458980983 1.7453207434415012e-09 8.758124749618029 0.07239359638634202 ALLETAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ALLETASPR 9 0 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 ALLETAS(1)PR;ALLET(0.004)AS(0.996)PR 84.738 0.0013292999999999998 70257000.0 8615.8 9619.0 9514.2 8191.799999999999 10349.6 7767.099999999999 8396.9 7613.9 11190.8 13282.8 13731.9 True False 10069.936403913996 10108.566013929132 10863.45662395321 10198.791367743876 8827.18755003222 8589.009366616292 9922.508038765884 8693.193641590819 8656.101668035446 10282.206254694753 10321.890248840078 0.9755903387023133 0.9793328324785358 1.0524677517447922 0.9880739982572441 0.8551909909160461 0.8321159360884971 0.9613072605457053 0.8422094628033577 0.8386159375225071 0.9961553559291347 1.0 13.333419575398763 -6.63384327689666 7.104057778247578 0.9078521576603644 1.003303694088639 0.3626942842022739 0.06071289444788741 0.22752206113762233 13.426616459753289 0.010250022561918107 0.021422007520047585 2.3235751496515935e-07 6.63384327689666 0.09545153642827464 ALLETAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ALLETASPR 9 0 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 ALLETAS(1)PR;ALLETAS(1)PR 99.788 0.00079614 121198000.0 33180.0 33484.0 32737.0 33073.0 37551.0 36996.0 34360.0 34757.0 37200.0 37156.0 37218.0 True False 36548.40917417499 36305.814192108206 34958.72968357314 35115.84409576724 34913.54730391734 36694.716841984686 35667.58860251346 34063.744368660984 35636.613366484686 34809.96381891739 32640.421944340556 1.119728453158432 1.1122961049344886 1.071025666983896 1.0758391590540053 1.0696414207957539 1.1242108605261794 1.092742877629919 1.0436061282157296 1.0917938936957778 1.0664679481863442 1.0 14.994372086769184 -13.603326041451222 0.2503312908614456 0.7416074340124459 1.0991727719884705 0.23989554744971087 0.0299437221635098 9.287079570405796 0.22041277042021115 1.2106480216919497 0.012191492300383647 2.4927226422353003e-14 13.603326041451222 0.35756533797602463 ALLETAS(ph)PRK ddPTM_A549_MK2206_60min_R1 2 ALLETASPRK 10 1 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 ALLET(0.032)AS(0.968)PRK;ALLET(0.004)AS(0.996)PRK 79.82 0.00051569 10253000.0 2604.0 3332.6 3323.2 2686.8 4561.1 3558.4 2678.5 2567.9 3967.4 4758.6 4470.1 True False 3043.4915383124085 3502.2151053145053 3794.4797305838956 3345.066120615034 3890.1682320526365 3934.947526125248 3165.1487789344196 2931.9076888639283 3068.7902346359365 3683.6289550087663 3360.050801516179 0.9057873580182397 1.0423101649933912 1.129292369291466 0.9955403409691355 1.1577706593892119 1.1710976287470576 0.9419943226769629 0.8725783811188043 0.9133166180854125 1.0963015658413786 1.0 11.714267330327255 -7.798151410315791 24.983024649089156 0.9489998569585443 1.0695595416487484 0.23960992089407207 0.08850440844414002 144.32288274869188 98213.1080557887 0.012569452154782812 0.01736745568605976 1.5916537238973912e-08 7.798151410315791 0.12055968469020417 ALLETAS(ph)PRK ddPTM_A549_PD325901_60min_R1 2 ALLETASPRK 10 1 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 ALLET(0.005)AS(0.995)PRK;ALLET(0.105)AS(0.895)PRK 88.803 0.00029117 11343900.0 4762.200000000001 4016.6 4752.799999999999 4410.3 5379.6 5409.700000000001 5120.299999999999 5160.799999999999 5492.0 5282.1 5135.2 True False 5245.655038253652 4355.092978258925 5075.35358890816 4682.714214481974 5001.755454612491 5365.6451967803205 5315.155818435671 5057.863795430718 5261.190338944456 4948.587304551177 4503.602954714861 1.1647685399890615 0.9670241853135699 1.1269540498890402 1.0397706595292997 1.1106119933099587 1.1914116876495473 1.180200801864913 1.1230705384753326 1.1682180671447668 1.0988063011572675 1.0 12.13686392724157 -4.928522495945472 20.945466572352956 1.0931646836862152 3.414219614815682 0.0570785930078157 0.0692000350358184 1299.2088346682076 418423.7304296867 0.010940168319998009 13960.41244626222 1.1789014559476241e-05 4.928522495945472 2.321054931129467 ALLEVVQSGGK ddPTM_A549_PD325901_60min_R1 2 ALLEVVQSGGK 11 0 O14818;Q8TAA3-2;Q8TAA3-5;Q8TAA3;A0A087WYS6;O14818-2 O14818 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like 0 ; 148.32 1.8088e-13 2994600.0 3859.2 3956.3 4094.2 3561.8 4482.4 4151.5 3783.6 4333.6 4232.0 3675.9 4428.2 False True 4250.983143007116 4289.711285636057 4372.05703242463 3781.80429656529 4167.571687440523 4117.69156042544 3927.586968465362 4247.162948356567 4054.14375717643 3443.803046666981 3883.5594726726004 1.0946100279704642 1.1045823595135909 1.1257860380893958 0.9737984761599945 1.0731319339297953 1.0602880139728397 1.0113368923799337 1.0936263441418963 1.0439247256812154 0.8867645959589268 1.0 11.92316384416391 -2.0000000000544533 0.06996967486890378 0.9373987135038138 1.3475847022059313 0.3824899749859213 0.05251566297398137 165.3773590136157 0.8305809887127596 0.8376195995028597 6.673210854364735 0.009999999998746166 2.0000000000544533 0.41018598870211753 ALLFIPR ddPTM_A549_MK2206_60min_R1 2 ALLFIPR 7 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 110.24 0.023407 16064900.0 1521.8 1513.9 1676.1100000000001 1584.1999999999998 2192.3 1916.8200000000002 1702.54 1459.23 2183.1 2016.94 2217.12 False True 1778.6426355621447 1590.9510436102833 1913.8076014771818 1972.329071117441 1869.8155741222504 2119.656620117861 2011.8694799652815 1666.0803212044525 1688.6313356943367 1561.311853174334 1666.5479146009152 1.0672616250508902 0.954638645352879 1.148366383414471 1.183481767213246 1.121969286175616 1.2718845954245792 1.207207703024284 0.9997194239707325 1.0132509968059993 0.9368538639035878 1.0 10.702647081356213 -8.280894054822854 24.27317710332957 1.0059418976009495 1.1363373335035305 0.44524596936427596 0.07900280913057213 455.7283155070007 568601.0477582694 0.013405869247906687 0.016220510429751752 5.237281833339142e-09 8.280894054822854 0.13039543590258096 ALLFIPR ddPTM_A549_PD325901_60min_R1 2 ALLFIPR 7 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 126.05 0.016421 34217000.0 4306.799999999999 4403.3 4997.8 4708.9 4864.5 4972.799999999999 5131.3 4619.4 5338.1 4093.3 4821.1 False True 4744.0231655014095 4774.381544382695 5336.9807622128465 4999.758058312167 4522.83430161396 4932.303165526584 5326.574429455101 4527.262443150807 5113.7582207427895 3834.8483394330533 4228.13526347091 1.1220131026761435 1.1291931896387268 1.2622540268098414 1.1824971877100794 1.0696995294093616 1.1665433715281892 1.259792815871854 1.0707468330694654 1.2094594666644758 0.9069833627519749 1.0 12.045805815785997 -10.868179995268182 0.9508966643191762 0.9929922204294545 1.1668392174630717 0.5610726613532435 0.06872179611357765 0.41075109939646587 0.6137881826488186 0.05178226554295415 0.010642079276912714 1.35462786448339e-11 10.868179995268182 0.17384699703361728 ALLFVPR ddPTM_A549_MK2206_60min_R1 2 ALLFVPR 7 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 126.05 0.016421 13957300.0 1563.81 1669.1599999999999 1644.15 1757.42 2208.6400000000003 1307.98 1499.6100000000001 1561.5 2196.0 2044.79 2118.99 False True 1827.7428965162562 1754.1131144412047 1877.3151928982643 2187.9879788935814 1883.7519817677155 1446.389575433144 1772.0697257337472 1782.8474068931905 1698.6095062914037 1582.8705188316683 1592.7863018511382 1.1475129428172826 1.101285911614491 1.178635948034238 1.3736858336555877 1.1826771611348093 0.9080876535365405 1.1125596218866558 1.119326180053886 1.0664390472954706 0.9937745678701871 1.0 10.637337003540065 -7.093056612548724 9.583065271360496 1.038608113533265 1.2023735135414024 0.4880585580471599 0.08336087036514993 0.2883573977166972 27.97729836382307 0.012481042028372868 0.021643771643442427 8.071298098144946e-08 7.093056612548724 0.16376540000813744 ALLFVPR ddPTM_A549_PD325901_60min_R1 2 ALLFVPR 7 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 126.05 0.016421 37316000.0 2980.2 3284.0 3507.9 3266.1000000000004 3620.3 3550.6000000000004 3532.7999999999997 3176.6000000000004 3481.5 3461.1000000000004 3455.0 False True 3282.747710092715 3560.7542051990035 3745.967188716324 3467.839579148716 3366.0226173569804 3521.6850907976786 3667.2426372223367 3113.240221005507 3335.1846622423755 3242.56555532498 3030.0569030495094 1.0833947398112862 1.1751443352814233 1.2362695845567482 1.14448001806785 1.1108776914286158 1.1622504802643756 1.2102883723178766 1.02745272469051 1.1007003396159918 1.070133551637792 1.0 11.565129171751895 -9.567379266176621 0.3753770675866629 0.9880314806858619 1.1686509801979161 0.39685482358310953 0.05458668803933316 0.7283696622413355 0.23484753331750463 0.05130441080206484 0.02285407390804491 2.7078258746229144e-10 9.567379266176621 0.18061949951205425 ALLQSS(ph)ASR ddPTM_A549_MK2206_60min_R1 2 ALLQSSASR 9 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 ALLQS(0.01)S(0.99)ASR;ALLQS(0.001)S(0.999)ASR 164.33 3.861e-06 50502000.0 6146.5 6423.099999999999 6188.9 5713.3 8912.7 6519.299999999999 6981.299999999999 6485.0 10114.2 8923.9 9353.7 True False 7183.878932502776 6750.008354721716 7066.5790817918505 7113.05875647978 7601.6536365822985 7209.167998838899 8249.711842589082 7404.2686094795645 7823.349849058518 6907.984792082282 7030.918141012934 1.0217554504862725 0.9600465002354945 1.0050720176317938 1.0116827722666406 1.0811751017609117 1.0253522874610348 1.173347730286696 1.053101239550606 1.112706717978005 0.9825153206928191 1.0 12.779497382351838 -6.618363137599806 4.168997324184359 1.0630315326895128 0.9940627986354779 0.2509779833308047 0.05139067701927389 0.23924828609302834 7.669601685080803 0.007735525763636143 0.01669820075209588 2.4078912158876393e-07 6.618363137599806 -0.06896873405403492 ALLSLRS(ph)PK ddPTM_A549_MK2206_60min_R1 3 ALLSLRSPK 9 1 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 ALLS(0.002)LRS(0.998)PK;ALLSLRS(1)PK;ALLS(0.004)LRS(0.996)PK 88.155 0.00031415 284209500.0 11955.199999999999 12723.8 11975.3 10318.4 16080.4 11825.6 11169.0 12105.099999999999 16661.5 15695.099999999999 15999.400000000001 True False 13972.945483422629 13371.387072256104 13673.577611236558 12846.408463210582 13714.99446157708 13076.977142802021 13198.262726122277 13821.034995313978 12887.69685294819 12149.566009279646 12026.307419023737 1.161864984535454 1.1118447754881653 1.1369722338551813 1.0681922568260291 1.1404160881404133 1.0873642829149943 1.097449305615179 1.1492334690739123 1.0716254294782013 1.0102490802838562 1.0 13.55390612214438 -9.811602286101108 0.45895190873772995 0.9910627868519833 1.1235608369296928 0.6974656764342647 0.02826528397763385 0.4108974216812413 0.17768233841954234 0.022945647327966338 0.008566634367063428 1.5431129427788703e-10 9.811602286101108 0.13249805007770943 ALLSLRS(ph)PK ddPTM_A549_PD325901_60min_R1 3 ALLSLRSPK 9 1 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 ALLS(0.001)LRS(0.999)PK;ALLS(0.001)LRS(0.999)PK;ALLS(0.001)LRS(0.999)PK 84.884 0.00036738 633481000.0 20876.8 22128.1 22684.9 24701.9 26035.4 25246.5 25068.7 25507.5 25346.5 25386.5 25531.1 True False 22996.197367312125 23992.9126455737 24224.43372938537 26227.680260914734 24206.763321254024 25040.900874450395 26022.703096619014 24998.732902253367 24281.27474982807 23783.592057512808 22390.936554977532 1.0270315094166993 1.071545738458182 1.0818856848576193 1.1713525334912482 1.0810965080365444 1.1183498650432186 1.1621980631638267 1.1164666042830673 1.0844242575655154 1.0621972867957454 1.0 14.45062725320505 -10.106002056825451 0.8030058579082965 1.0051971980172114 1.1045576623223028 0.25960691858473883 0.04237145845182381 0.38175195590685396 0.48796766463353103 0.019660524131387063 0.00820042108019649 7.834259324399703e-11 10.106002056825451 0.09936046430509138 ALLSS(ph)PEGEEK ddPTM_A549_PD325901_60min_R1 1 ALLSSPEGEEK 11 0 A0A499FJI4;O75592-2;O75592;H7C3U4 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 ALLS(0.444)S(0.556)PEGEEK 55.754 0.016442 1727500.0 2793.5 3178.0 2853.3 2766.6 3445.5 3718.9 3049.3 3900.3 3635.8 3571.5 4114.8 True False 3077.0940635339934 3445.8212131919713 3046.9420962867503 2937.486598595522 3203.4999663297185 3688.6145113973635 3165.3427801409866 3822.5054567738425 3482.9999698350825 3345.994880483997 3608.705685866317 0.8526863455741465 0.9548634643960323 0.8443310043876 0.8140000471915293 0.8877143899200183 1.0221433479166822 0.877140741218719 1.059245554921501 0.9651659827722812 0.9272008226076068 1.0 11.817265771245703 -7.157076873767244 5.645747450304956 0.9829148120053313 0.8691207897216312 0.468016241174363 0.055308726311490114 0.1369911324227114 6.214035802783663 0.0073361262677167785 0.012819975349374499 6.965032162854238e-08 7.157076873767244 -0.11379402228370006 ALLT(ph)PVAIAAGR ddPTM_A549_MK2206_60min_R1 2 ALLTPVAIAAGR 12 0 P00390-2;P00390-3;P00390;P00390-5;P00390-4 P00390-2 GSR Glutathione reductase, mitochondrial 1 ALLT(1)PVAIAAGR;ALLT(1)PVAIAAGR 142.47 1.0795e-11 13871800.0 3725.1 4100.9 4384.3 3679.3 5614.4 5225.1 3763.7 4228.0 6171.6 6535.8 5826.8 True False 4353.805810048988 4309.618293639876 5006.059666225017 4580.728665170054 4788.529197350706 5778.016613859331 4447.515571878095 4827.331947706954 4773.742454020045 5059.358240689764 4379.8447485010365 0.9940548261531507 0.9839659944829792 1.1429765102834517 1.0458655336442617 1.0933102592254071 1.3192286360919088 1.015450507326822 1.1021696486751196 1.0899341707611478 1.155145565929314 1.0 12.096664016466322 -4.249484590301046 11.744143688188622 1.0648948221859025 1.0832193663349206 0.0 0.09550698528641487 0.0 0.0 0.012100498270017156 0.0 5.630090938090707e-05 4.249484590301046 0.018324544149018074 ALLT(ph)PVAIAAGR ddPTM_A549_PD325901_60min_R1 2 ALLTPVAIAAGR 12 0 P00390-2;P00390-3;P00390;P00390-5;P00390-4 P00390-2 GSR Glutathione reductase, mitochondrial 1 ALLT(1)PVAIAAGR;ALLT(1)PVAIAAGR 83.182 0.00062183 18355600.0 1813.82 1745.0 1668.6100000000001 1626.25 1716.73 1644.04 1833.69 2130.9 1948.45 1653.83 1988.6999999999998 True False 1997.95767113629 1892.0572740780326 1781.8519087670534 1726.699769018277 1596.1528071969858 1630.6514833197255 1903.4720763836692 2088.3975278412895 1866.563422417395 1549.4068915556065 1744.1025074079773 1.1455505984597105 1.0848314626242586 1.0216440267694917 0.9900219520837892 0.9151714422847376 0.9349516306487864 1.0913762627476187 1.197405266588941 1.0702142875715572 0.8883691669351933 1.0 10.768269119836058 -14.9998168893694 0.00601383324061866 0.4408216569905299 1.588030763820835 0.04235519071470517 0.09075391923208742 153677.50773562337 72.03238653238607 7503.692455931952 6287.961691772994 1.0004217167058852e-15 14.9998168893694 1.1472091068303052 ALLTPVAIAAGR ddPTM_A549_MK2206_60min_R1 2 ALLTPVAIAAGR 12 0 P00390-2;P00390-3;P00390;P00390-5;P00390-4 P00390-2 GSR Glutathione reductase, mitochondrial 0 ; 93.111 0.0007349 3319200.0 2039.87 1810.79 1687.85 1514.34 2503.9 1797.96 1767.35 1953.52 2622.3 2442.8 2682.8 False True 2384.150185966719 1902.9514764905655 1927.2125100102405 1885.3533679813052 2135.579626896273 1988.2189338107444 2088.454618051052 2230.4374424040902 2028.3532369526172 1890.9697834017181 2016.5867184867482 1.1822701023022664 0.9436497121822488 0.9556804536808741 0.9349230314261313 1.0590070872324386 0.9859327722354082 1.035638387829031 1.1060458853353037 1.0058348685717313 0.9377081412202827 1.0 10.97769973138815 ALLTPVAIAAGR ddPTM_A549_PD325901_60min_R1 2 ALLTPVAIAAGR 12 0 P00390-2;P00390-3;P00390;P00390-5;P00390-4 P00390-2 GSR Glutathione reductase, mitochondrial 0 ; 103.7 0.00052786 6919100.0 3111.4 2593.0 2447.7 2991.2 3448.5 3174.8 2863.2 3342.6 3371.7 3339.2 3479.7 False True 3427.267037508382 2811.52121013429 2613.81564121581 3175.959630491911 3206.2892566791543 3148.9454814015858 2972.160642803158 3275.9292207810263 3229.99917440259 3128.3623421285624 3051.7189596357116 1.1230611608866827 0.9212909993749574 0.8565060137542369 1.0407117013393101 1.0506502397789257 1.031859592266478 0.9739299988351318 1.0734701537431477 1.0584196045327057 1.0251148233197724 1.0 11.575406391589125 ALMDEVVK ddPTM_A549_MK2206_60min_R1 2 ALMDEVVK 8 0 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ; 143.85 0.0026101999999999996 5733600.0 3308.1000000000004 3643.0 3792.6000000000004 2902.0 5063.700000000001 4291.9 3688.5 3768.3999999999996 5716.4 5044.8 4967.200000000001 False True 3866.426404720155 3828.4131394889123 4330.447708898796 3612.9901302757303 4318.836437842827 4746.066009267352 4358.652705282658 4302.582240240987 4421.644527215015 3905.1761762342344 3733.7071522541264 1.0355462405202034 1.0253651353394466 1.1598252172199428 0.9676683207718858 1.1567153667194934 1.2711404016788088 1.1673793705677311 1.1523619996933656 1.1842504907074902 1.0459246044180481 1.0 11.866393061032051 -5.740014534461422 24.71799035560989 1.1109507721422685 1.0304555893267904 0.14065694298082854 0.08395665724641656 407.81139408399775 470485.9309256051 0.013364510180819012 0.05165568857557536 1.8196399600020924e-06 5.740014534461422 -0.08049518281547807 ALMDEVVK ddPTM_A549_PD325901_60min_R1 4 ALMDEVVK 8 0 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ;;; 136.16 0.0014593 7984100.0 6518.6 6909.7 6910.799999999999 6678.200000000001 8814.1 7933.0 7181.099999999999 7963.8 8249.599999999999 7124.2 8340.4 False True 7180.363473260308 7492.004668594261 7379.808446016355 7090.69724670737 8195.028022994273 7868.3962781777645 7454.380690148702 7804.955761519756 7902.898000756772 6674.37679617642 7314.583674151707 0.9816503294144127 1.0242557884831538 1.0089170860257077 0.9693917743759625 1.12036834740901 1.075713482639227 1.0191120947171621 1.0670403278180995 1.080430322874568 0.9124752813700592 1.0 12.836560037155783 -6.709967751557652 24.99999911970908 1.0472372768683629 0.9989870238991536 0.12235746595122954 0.05287187372788879 118.31375575937801 57464.789847688866 0.005813134335303371 0.012100994424653615 1.94998939042058e-07 6.709967751557652 -0.04825025296920926 ALMGS(ph)PQLVAAVVR ddPTM_A549_MK2206_60min_R1 8 ALMGSPQLVAAVVR 14 0 P14923;C9JTX4;C9J826;C9JK18;C9JKY1 P14923 JUP Junction plakoglobin 1 ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR 172.26 1.2582999999999998e-22 85052900.0 17022.9 19441.300000000003 17774.899999999998 17218.6 23736.5 19706.300000000003 19128.5 19728.899999999998 28874.600000000002 25941.5 25535.5 True False 19895.94935005313 20430.779129493774 20295.64809916817 21437.157772972318 20244.892293551413 21791.607586016748 22603.900846685476 22525.531992222266 22334.549203261286 20081.297132845786 19194.33060605276 1.0365534364495692 1.0644173818206044 1.0573772285014262 1.116848418053834 1.054732916143862 1.13531479858667 1.177634235369351 1.1735513185919098 1.1636013603005402 1.0462098181487678 1.0 14.228392627248372 -6.172619732561595 6.4993128828910365 1.0974820055308248 1.0532619012363658 0.15057206650464816 0.054574188869791956 0.5901276284144924 36.17180175773363 0.01022347213148605 0.02739120362742509 6.720170122353953e-07 6.172619732561595 -0.044220104294458995 ALMGS(ph)PQLVAAVVR ddPTM_A549_PD325901_60min_R1 6 ALMGSPQLVAAVVR 14 0 P14923;C9JTX4;C9J826;C9JK18;C9JKY1 P14923 JUP Junction plakoglobin 1 ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR 182.36 5.6989e-26 121649000.0 26853.1 29137.9 26123.300000000003 28503.1 32928.8 32072.5 29230.800000000003 32154.7 31616.799999999996 31875.5 32761.4 True False 29579.2069437926 31593.453092468946 27896.18423016423 30263.671751763162 30615.994686193004 31811.312193603466 30343.19408970752 31513.349283625852 30288.05584638369 29862.875490093124 28731.955491625526 1.0294881235081275 1.0995928593052937 0.9709114382519178 1.0533105468781645 1.065572953957715 1.1071753261930075 1.0560782783668037 1.0968048900399772 1.0541592219579945 1.0393610521496606 1.0 14.810368565321523 -10.311934219630553 0.899801123765851 1.0028751221060783 1.0595871115575222 0.11506793927944836 0.03748907932591323 0.5457496264182808 0.8532455290517998 0.01770558670992209 0.006713710381299029 4.8760233914908894e-11 10.311934219630553 0.056711989451443845 ALNEALK ddPTM_A549_PD325901_60min_R1 2 ALNEALK 7 0 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic 0 ; 83.265 0.037825 1509400.0 1408.3 1634.6 1695.7 1541.0 1907.2 1602.5 2009.7 1998.3 1967.5 2145.8 2159.0 False True 1551.269579264335 1772.3534786291998 1810.780399072455 1636.1840701350754 1773.2448514828131 1589.4497713071814 2086.180233250037 1958.4423388639757 1884.8128171655537 2010.3138217954815 1893.4566870286224 0.8192791469123716 0.9360412048350214 0.9563357912950678 0.8641254280301064 0.9365119696852131 0.839443427566059 1.1017839740099116 1.0343211715802882 0.9954348732018616 1.0617162967430966 1.0 10.88680670449878 -7.7499120361346066 24.999709891747113 1.0081923752713675 0.8976466088958935 0.6451795680295009 0.05189030343745014 124.64826293986516 270327.7737389775 0.0073079793689903375 0.010787463949427582 1.778639626849571e-08 7.7499120361346066 -0.11054576637547397 ALNHSVEDIEPDLLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 ALNHSVEDIEPDLLTPR 17 0 I3L2K5;Q8IWR0 I3L2K5 ZC3H7A Zinc finger CCCH domain-containing protein 7A 1 ALNHSVEDIEPDLLT(1)PR;ALNHSVEDIEPDLLT(1)PR 129.02 4.7498e-12 19254900.0 411.85 134.16 236.66 398.93 634.47 469.28999999999996 349.19100000000003 410.9 777.77 667.15 507.21000000000004 True False 481.3602112342418 140.98817095630864 270.2219466297499 496.6678679086483 541.140303477327 518.94995631051 412.63448469848396 469.14633332847416 601.6063368434723 516.4403516442017 381.2557587161411 1.2625650897843412 0.3697994528163429 0.7087681705837263 1.3027157139374144 1.419362963328315 1.3611596531893626 1.082303611853652 1.2305291726170904 1.5779599995272209 1.3545771829999045 1.0 8.574615318835246 -6.261953068981783 24.75790350507145 1.2800865899420268 0.7393197335581452 0.4633666547584031 0.24346871060796987 28.224454231753867 1360370.7620519404 0.03804292999448958 0.09365673608532678 5.470750780896107e-07 6.261953068981783 -0.5407668563838817 ALNHSVEDIEPDLLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 ALNHSVEDIEPDLLTPR 17 0 I3L2K5;Q8IWR0 I3L2K5 ZC3H7A Zinc finger CCCH domain-containing protein 7A 1 ALNHSVEDIEPDLLT(1)PR;ALNHSVEDIEPDLLT(1)PR 140.17 1.5869e-13 26134000.0 1046.11 1252.6399999999999 1258.1 1094.8 1450.12 1160.1 1375.87 895.02 1443.9099999999999 1331.47 1350.4699999999998 True False 1152.3103170945203 1358.2043689404616 1343.4822315698873 1162.4233095287987 1348.2685738424168 1150.6525302299285 1428.2294857549534 877.1681239703933 1383.2274840322825 1247.4007569699074 1184.3707513346658 0.9729304069658791 1.1467729740960784 1.1343426288228742 0.9814691119473066 1.1383838821779875 0.9715306874416307 1.205897295374344 0.7406195424717418 1.167900746006709 1.0532181376179826 1.0 10.209905052609118 -6.199214611699515 24.99459883173492 1.057005590659929 1.0908909815407255 0.005642291817279155 0.12663128463053813 1173.2464533750297 471269.9721036438 0.017021280268695167 0.045034028296903436 6.320994148640268e-07 6.199214611699515 0.03388539088079656 ALNS(ph)ALAEEITLHYAR ddPTM_A549_PD325901_60min_R1 2 ALNSALAEEITLHYAR 16 0 A0A494C178;Q6ZSY5-2;Q6ZSY5 A0A494C178 PPP1R3F Protein phosphatase 1 regulatory subunit 3F 1 ALNS(1)ALAEEITLHYAR;ALNS(1)ALAEEITLHYAR 126.91 1.1134000000000001e-09 7966400.0 578.99 422.04999999999995 289.34000000000003 566.58 533.55 587.78 563.62 492.70000000000005 446.04 607.34 351.56 True False 637.76863857009 457.61763468460396 308.9763523427636 601.576359803459 496.0752886475751 582.9933145578377 585.0688675246984 482.8727119843273 427.2944899458824 568.9924487507071 308.3203487224562 2.0685259380794117 1.4842278058544305 1.0021276689100334 1.951140631152393 1.608960584998988 1.8908687570363274 1.8976005636636253 1.5661396141550152 1.3858783298488169 1.8454586312851597 1.0 8.268286298266824 -9.417218367500286 0.8661236937525896 1.0702451544266596 1.6767370216896504 0.0 0.36366254342141363 0.34625584777191776 0.5541869495044024 0.08648730876995528 0.06205125892605612 3.826323036872921e-10 9.417218367500286 0.6064918672629909 ALPAAHIPAPPHEGS(ph)PR ddPTM_A549_MK2206_60min_R1 3 ALPAAHIPAPPHEGSPR 17 0 P17029;E9PC66 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 ALPAAHIPAPPHEGS(1)PR;ALPAAHIPAPPHEGS(1)PR;ALPAAHIPAPPHEGS(1)PR 61.276 0.0041327 10445100.0 828.59 1112.8 1030.55 744.6899999999999 1583.88 1013.8999999999999 1042.98 913.2099999999999 1508.45 1403.95 1556.6000000000001 True False 968.4357349194618 1169.4367668469017 1176.6974862642126 927.1390834304049 1350.8933501531487 1121.1902250276496 1232.4759654482068 1042.6603140883324 1166.7884834996669 1086.7967199143777 1170.0532600255228 0.8276851729795077 0.9994731067382286 1.0056785673487587 0.7923904963182452 1.1545571439403375 0.9582386232599298 1.053350311097225 0.891122096498059 0.9972097197303782 0.9288438031365094 1.0 10.192358486458687 -5.259364748604983 24.040062178002355 0.9901491145104288 0.8276850806037369 0.18321233506135493 0.0880035266028631 111.11891155576949 1287434.735462249 0.01028695260185364 0.09294523715783452 5.503452866724023e-06 5.259364748604983 -0.16246403390669184 ALPAAHIPAPPHEGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ALPAAHIPAPPHEGSPR 17 0 P17029;E9PC66 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 ALPAAHIPAPPHEGS(1)PR;ALPAAHIPAPPHEGS(1)PR 59.163000000000004 0.001527 16704600.0 4351.2 4550.1 4358.0 5319.6 5937.2 5738.9 4953.0 5265.1 5835.6 5867.1 6245.0 True False 4792.930620815857 4933.552895577339 4653.760086782901 5648.179610311838 5520.19155422806 5692.1643011262295 5141.489125385597 5160.083450108954 5590.350025845643 5496.65030471445 5476.904590316696 0.8751166907836733 0.90079219278349 0.8497062546992082 1.0312722299924597 1.0079035453690204 1.0393031697484958 0.9387582055885869 0.9421532482475795 1.0207134219079737 1.00360526901138 1.0 12.419145032971594 -6.261434951970876 24.99999995234117 1.0031987678531038 0.8777637568025959 0.7372191047226933 0.032522198550457765 0.15054119730859897 842880.846344051 0.004713076325553737 0.011651063196695077 5.477281327834971e-07 6.261434951970876 -0.12543501105050792 ALPASET(ph)PK ddPTM_A549_MK2206_60min_R1 2 ALPASETPK 9 0 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 ALPAS(0.003)ET(0.997)PK;ALPASET(1)PK 166.87 9.5154e-07 101491000.0 23737.0 29975.0 24742.2 28766.0 40590.0 30946.0 27620.0 29815.0 49741.0 34532.0 38055.0 True False 27743.225286068246 31500.59946642332 28251.01600567312 35813.671291354825 34619.26476924787 34220.685179707696 32638.196480929128 34041.36755460806 38474.74292005495 26731.197216484423 28604.89323543059 0.9698769038475185 1.1012311497602811 0.987628786905621 1.252012059496006 1.2102567376957647 1.196322772403194 1.1410004649310421 1.1900539979098312 1.3450406055842001 0.9344973601710433 1.0 14.803974339233203 -6.2531257194309475 24.80071289781009 1.177094696198808 1.0277441612217366 0.222383341370343 0.11173541260163039 668.9394631327788 1995525.7432911145 0.017395452661593865 0.045156613278386395 5.583085523565464e-07 6.2531257194309475 -0.1493505349770714 ALPASET(ph)PK ddPTM_A549_PD325901_60min_R1 3 ALPASETPK 9 0 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 ALPAS(0.009)ET(0.991)PK;ALPAS(0.012)ET(0.988)PK;ALPAS(0.019)ET(0.981)PK 113.15 0.00026433 146043800.0 44399.1 46575.7 42551.0 46039.6 52082.7 46061.4 45202.2 47910.9 50183.0 46403.7 50799.6 True False 48906.463947110096 50500.797696433365 45438.766739949315 48883.36152848199 48424.59082756077 45686.29123000853 46922.39445659296 46955.27951412605 48073.98302608337 43473.762462695006 44551.57124519648 1.0977494750509649 1.1335357269106043 1.019913899105152 1.0972309205312833 1.086933400419225 1.0254698084286846 1.0532152547066924 1.053953389336156 1.079063693657419 0.9758076145828934 1.0 15.44318869317497 -14.999999999999998 0.18384426147657837 0.6950473925679238 1.0885900594356683 0.5293726827321725 0.031200069844068506 35.14741960767246 0.3952056572778045 3.8842615536132197 0.03297627299112607 1.000000000000004e-15 14.999999999999998 0.39354266686774453 ALPASET(ph)PKAAESETPGKS(ph)PEK ddPTM_A549_PD325901_60min_R1 1 ALPASETPKAAESETPGKSPEK 22 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 2 ALPAS(0.46)ET(0.539)PKAAES(0.081)ET(0.061)PGKS(0.859)PEK 49.793 0.0056735 12257000.0 4411.9 4547.6 4423.9 4785.3 4709.7 5007.4 4678.4 5091.5 4949.7 5042.5 5359.9 True False 4859.792840130878 4930.842211803588 4724.1324570717925 5080.877112795179 4378.9069195829525 4966.621394598181 4856.439072118712 4989.9460382955185 4741.6813220454105 4724.115689441567 4700.66627920552 1.0338519161909645 1.0489666610914934 1.004992096114136 1.0808844557359045 0.9315502653217599 1.056578174155688 1.033138449670909 1.061540160885212 1.0087253679380155 1.0049885290389111 1.0 12.19864954561807 -8.972801611688203 24.00364771660666 1.0038493932700647 1.0306525758928715 0.09597389754795782 0.03692386024603261 192.1286426963974 169562.9013356953 0.005965554469053486 0.0062322581231220135 1.0646292361524738e-09 8.972801611688203 0.026803182622806787 ALPAT(ph)PQLPSR ddPTM_A549_PD325901_60min_R1 2 ALPATPQLPSR 11 0 O43516-2;O43516;O43516-3;O43516-4 O43516-2 WIPF1 WAS/WASL-interacting protein family member 1 1 ALPAT(1)PQLPSR;ALPAT(0.965)PQLPS(0.035)R 103.88 0.00021621 12016400.0 3663.1000000000004 4099.5 3703.7000000000003 3717.3 3934.1000000000004 3876.9 3814.2 3916.8999999999996 4013.9 3891.7 3931.0 True False 4034.975215368305 4444.979252196502 3955.05535415737 3946.9091783991666 3657.7823879082102 3845.327811782099 3959.3514682103273 3838.774356751394 3845.2097417132504 3645.977397838324 3447.5119206621193 1.1704021068601147 1.289329625100415 1.1472202113220753 1.14485729686502 1.060991947840954 1.115392172753844 1.148466360473064 1.113491249658719 1.1153579248464935 1.0575677421118497 1.0 11.751339824900368 -10.213297430006188 0.022358265141719524 3.4452719589966135e-10 2.1215570141186606 0.5689083073941066 0.046459927507952754 219.27195444065907 1.4368630043900095 73.77489277840303 62.60892579042118 6.119311622950564e-11 10.213297430006188 2.1215570137741335 ALPDSQQVPS(ph)SPASK ddPTM_A549_PD325901_60min_R1 1 ALPDSQQVPSSPASK 15 0 O14924-5;O14924-4;O14924;O14924-6;O14924-7;O14924-2;O14924-3 O14924-5 RGS12 Regulator of G-protein signaling 12 1 ALPDSQQVPS(0.734)S(0.266)PASK 210.08 2.3133000000000002e-45 10926000.0 3197.5 3731.4 3556.7 3102.4 4562.4 4378.1 3900.9 3761.7 3408.2 4472.0 5039.6 True False 3522.10784612491 4045.85817334944 3798.0790501745637 3294.0282019383894 4241.952763425542 4342.446205154427 4049.3508841543858 3686.6699425034385 3264.965206334759 4189.637156803707 4419.761148656528 0.7969000422557954 0.9154019951008567 0.8593403404455607 0.7452955241573797 0.9597696845484434 0.9825069860334867 0.9161922438693919 0.8341332978195152 0.7387198304431469 0.9479329348096622 1.0 12.109752690713258 -11.138405362240864 1.5272164724152486 0.9995364890165175 0.8484574371176413 0.21874863557762714 0.0781383270728356 0.4162835933968879 1.7482303128408434 0.06259155725194504 0.013605390974155722 7.271008255787998e-12 11.138405362240864 -0.15107905189887616 ALPDSQQVPSS(ph)PASK ddPTM_A549_MK2206_60min_R1 2 ALPDSQQVPSSPASK 15 0 O14924-5;O14924-4;O14924;O14924-6;O14924-7;O14924-2;O14924-3 O14924-5 RGS12 Regulator of G-protein signaling 12 1 ALPDSQQVPS(0.266)S(0.734)PASK;ALPDSQQVPS(0.215)S(0.785)PASK 191.78 6.98e-34 17034100.0 5323.2 5540.5 4930.7 4541.4 5621.2 4841.1 4305.4 4549.700000000001 7178.200000000001 7907.7 7388.299999999999 True False 6221.626020255231 5822.487784611125 5629.947402380237 5654.043203871192 4794.328926358615 5353.381988737902 5087.635449999718 5194.6339078718875 5552.34916122994 6121.345077863834 5553.58120329344 1.1202908164133119 1.048420392441226 1.013750802642718 1.0180895888437131 0.8632860042661182 0.9639513302809342 0.9160999477206884 0.9353665171567698 0.9997781535880363 1.1022338296293739 1.0 12.439202671989463 -5.491046859104846 1.3587872687805647 0.9784294327882961 1.1440702494396011 0.37100412922661774 0.05806271335042036 0.6281606351466433 1.3581302763717054 0.007183651283657357 0.12633084189035032 3.2281457954281182e-06 5.491046859104846 0.16564081665130503 ALPDSQQVPSS(ph)PASK ddPTM_A549_PD325901_60min_R1 1 ALPDSQQVPSSPASK 15 0 O14924-5;O14924-4;O14924;O14924-6;O14924-7;O14924-2;O14924-3 O14924-5 RGS12 Regulator of G-protein signaling 12 1 ALPDSQQVPS(0.279)S(0.721)PASK 184.87 2.5879000000000002e-33 14965000.0 3195.1 3360.0 2754.3 3038.7 3135.7 2953.7 3161.7 3734.4 3286.6 3363.3 3675.2 True False 3519.4641998916964 3643.1589919210273 2941.223360951388 3226.3935976115854 2915.459249577738 2929.6460464961146 3282.0202236486234 3659.9144624198725 3148.475631459371 3150.9406640156326 3223.173699012318 1.0919250802307585 1.1303017870359906 0.9125240013756228 1.0009989838897773 0.9045306030112886 0.9089321023542263 1.0182573234121195 1.1355002256134645 0.9768246844481769 0.9775894687218315 1.0 11.654266222966836 -5.7450189923530965 24.998866404305684 0.9865548863714418 1.111113510760583 0.38897997759522585 0.062322092785402794 193.11689213550451 294001.8477150762 0.008528860705194027 0.03283987874508492 1.7987922495090511e-06 5.7450189923530965 0.12455862438914111 ALPGQLKPFETLLSQNQGGK ddPTM_A549_MK2206_60min_R1 2 ALPGQLKPFETLLSQNQGGK 20 1 P09211;A0A087X243 P09211 GSTP1 Glutathione S-transferase P 0 ; 251.13 2.5773999999999996e-97 21060000.0 11351.3 13214.8 12184.2 12169.599999999999 17015.0 13820.4 12501.599999999999 12707.4 18431.2 17343.7 17872.5 False True 13267.121927360084 13887.376875025544 13912.102772442318 15151.152546314099 14512.116039634207 15282.865554760958 14772.978896668486 14508.71286478036 14256.562628578384 13425.746124277211 13434.264994093635 0.9875584509605076 1.0337280737823111 1.0355685836596764 1.1277991429360141 1.0802314861300153 1.137603401561608 1.099649210668646 1.0799781656204568 1.06120897829887 0.999365884935263 1.0 13.713629771359535 -10.123771765864282 0.8324821505444753 1.0041993272825478 1.0742688450116762 0.3079333402026073 0.041051064271847924 0.5576529014321497 0.7658318663862287 0.020519753081010873 0.008670162171609668 7.520179970941313e-11 10.123771765864282 0.0700695177291284 ALPGQLKPFETLLSQNQGGK ddPTM_A549_PD325901_60min_R1 2 ALPGQLKPFETLLSQNQGGK 20 1 P09211;A0A087X243 P09211 GSTP1 Glutathione S-transferase P 0 ; 274.95 1.6327999999999997e-113 36461000.0 22488.0 22535.1 22720.0 24052.0 28685.0 26661.0 28617.0 27583.0 29324.0 26987.0 28971.0 False True 24770.96520520937 24434.21196394032 24261.915826458815 25537.637413944733 26670.264557877785 26443.881655426376 29706.03559482327 27032.8354265551 28091.614256956895 25283.036214369753 25407.75066230025 0.9749373541343928 0.9616833968776128 0.9549021536352837 1.0051120917144865 1.0496901088316661 1.0407801149695446 1.169172194329692 1.0639601980456355 1.105631688154077 0.9950914801712241 1.0 14.632981039396265 -6.616576453826638 2.1931073775349894 1.0611830617114129 0.9633474397060952 0.47523726750847284 0.045194551329592714 0.2357645274069139 2.284099858718504 0.0075183069372956 0.01840047175114866 2.417817664356451e-07 6.616576453826638 -0.0978356220053177 ALPLEAEPPPGPPS(ph)PSVTTEGQAVKPEPT ddPTM_A549_MK2206_60min_R1 2 ALPLEAEPPPGPPSPSVTTEGQAVKPEPT 29 1 Q8N554-2;Q8N554 Q8N554-2 ZNF276 Zinc finger protein 276 1 ALPLEAEPPPGPPS(0.825)PS(0.139)VT(0.03)T(0.005)EGQAVKPEPT;ALPLEAEPPPGPPS(0.819)PS(0.145)VT(0.029)T(0.007)EGQAVKPEPT 89.565 8.3195e-10 9354100.0 3023.7 3152.7 2797.3999999999996 2423.8 4839.700000000001 3612.0 3259.3999999999996 2820.6000000000004 5049.6 4163.3 4793.9 True False 3534.026637632577 3313.1589637295347 3194.1133841885485 3017.6311088085154 4127.786541111823 3994.2194425484463 3851.5907896430244 3220.4286877252234 3905.8736625542224 3222.807638462572 3603.4423250908076 0.9807362845868551 0.91944276190019 0.8864061350303577 0.8374301117008915 1.1455120323058874 1.1084455035499399 1.0688642809194853 0.8937089585981005 1.0839284523461308 0.894369146974305 1.0 11.815160039132115 -6.752530015846507 24.999964898233827 1.0429100636730309 0.9055639173209103 0.327833499207426 0.08212940466258516 137.12573152379247 384776.25378291425 0.010245545925630341 0.021083884336346163 1.7679500233417874e-07 6.752530015846507 -0.1373461463521205 ALPLEAEPPPGPPS(ph)PSVTTEGQAVKPEPT ddPTM_A549_PD325901_60min_R1 2 ALPLEAEPPPGPPSPSVTTEGQAVKPEPT 29 1 Q8N554-2;Q8N554 Q8N554-2 ZNF276 Zinc finger protein 276 1 ALPLEAEPPPGPPS(0.793)PS(0.16)VT(0.037)T(0.009)EGQAVKPEPT;ALPLEAEPPPGPPS(0.831)PS(0.14)VT(0.024)T(0.004)EGQAVKPEPT 114.23 6.7659e-21 10574400.0 3736.0 3374.2 3641.8999999999996 3687.8999999999996 4792.4 4578.4 3961.7 4741.8 3583.1 3766.7 4839.0 True False 4115.275969702161 3658.55567575593 3889.0612345237837 3915.6932071714104 4455.798356882465 4541.11502836368 4112.464661425421 4647.221079129863 3432.514767565894 3528.8699191709557 4243.833676948359 0.9697071758621226 0.8620874318492876 0.9164028401132619 0.9226782916683702 1.0499465097054708 1.0700501890613885 0.9690447304199247 1.0950525946322123 0.8088240559969669 0.8315287986753719 1.0 12.051152400353073 -4.93527234637975 15.520694810571504 0.9404483334577796 1.265332747381804 0.0 0.09208490680487354 8670263.948394459 45389210.286431976 0.013883136333195108 89603918.33269814 1.1607204969103472e-05 4.93527234637975 0.32488441392402434 ALPLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ALPLSPR 7 0 J3QLN7;Q99741;J3QR52;J3KTI7 J3QLN7 CDC6 Cell division control protein 6 homolog 1 ALPLS(1)PR;ALPLS(1)PR 109.86 0.008557200000000001 121295000.0 1557.9299999999998 1682.1 1321.72 1527.37 1861.9299999999998 1852.3899999999999 1358.33 1698.77 2186.2 1894.81 2275.5 True False 1820.8704962684542 1767.7117051699977 1509.1597705546897 1901.575718566245 1588.0425634837566 2048.4086802830343 1605.1209784916884 1939.5758497649344 1691.0291906440193 1466.7711049973016 1710.4305493948827 1.064568506983603 1.033489319864744 0.882327418139603 1.111752663233819 0.9284460944909896 1.1975982778182497 0.9384309576670911 1.133969368385708 0.9886570321386464 0.8575449646384162 1.0 10.740143810528934 -3.861073274909674 2.003389247256265 1.0106576499839153 12.326923466253689 0.025118651173723028 0.10150271971913902 914.6358889234722 22.718116284109648 0.011106929442558212 46844.24535914167 0.00013769771233522663 3.861073274909674 11.316265816269773 ALPLS(ph)PR ddPTM_A549_PD325901_60min_R1 4 ALPLSPR 7 0 J3QLN7;Q99741;J3QR52;J3KTI7 J3QLN7 CDC6 Cell division control protein 6 homolog 1 ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR 103.83 0.010265999999999999 236597000.0 10021.7 10349.0 10682.1 10491.7 11777.800000000001 11487.5 11170.7 11257.300000000001 11404.6 11407.599999999999 12356.0 True False 11039.09560641439 11221.146549818652 11407.051542685553 11139.748480620477 10950.567959204218 11393.949608668481 11595.807101341583 11032.764320318987 10925.304322564813 10687.3221891668 10836.290331137405 1.0187153785178897 1.0355154953328805 1.0526712734807502 1.0280038777302878 1.0105458256077215 1.051462194209459 1.0700901089759245 1.018131111586871 1.008214433972079 0.9862528469228483 1.0 13.403583332103912 -8.506749538564163 8.62475086474638 1.0043436520761375 1.0381287580215306 0.5223088555829674 0.016567263747363926 0.13575658702069127 61.80259990813828 0.0026729131954640237 0.003155764305965665 3.11351140876983e-09 8.506749538564163 0.03378510594539308 ALPLS(ph)SAEK ddPTM_A549_PD325901_60min_R1 1 ALPLSSAEK 9 0 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 1 ALPLS(0.588)S(0.412)AEK 107.83 0.00046937 6937700.0 4344.8 4298.0 4313.9 4777.0 4948.2 4701.5 4077.2 4916.8 4516.4 4147.0 4709.3 True False 4785.880897527288 4660.207543832314 4606.6671955880565 5072.064440645849 4600.655502363285 4663.212542777354 4232.360077129446 4818.730566845018 4326.591414204071 3885.157712268553 4130.085954712316 1.1587848170730508 1.1283560669034365 1.1153925719952569 1.2280772110466032 1.1139369864963855 1.1290836544108132 1.0247631946498443 1.1667385666264347 1.047579024176857 0.9406965750520745 1.0 12.011956091766079 -8.708889714587672 0.45339261363696115 0.9993693886843154 1.155964212614534 0.6138220849711407 0.04956723472396395 0.4180115375817846 0.21188494577280315 0.01975010209911367 0.01951542437617271 1.9548358067783912e-09 8.708889714587672 0.15659482393021862 ALPLS(ph)SAEKR ddPTM_A549_MK2206_60min_R1 1 ALPLSSAEKR 10 1 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 1 ALPLS(0.5)S(0.5)AEKR 57.836000000000006 0.0051847 11736000.0 939.34 969.23 972.84 656.09 1206.7 907.98 685.58 966.55 1488.7 1318.5 1156.7 True False 1097.877627341927 1018.559667083953 1110.8033404854475 816.832079452999 1029.1960285058242 1004.061840931655 810.14101170874 1103.5614224352314 1151.5118269653974 1020.6499342619808 869.459466704048 1.2627128341057323 1.1714860854239875 1.2775792121699328 0.9394711435478996 1.1837193887914137 1.1548115575046394 0.9317754797470056 1.2692499934684918 1.3243996656112735 1.1738901850491852 1.0 9.763974961932105 ALPLS(ph)SAEKR ddPTM_A549_PD325901_60min_R1 2 ALPLSSAEKR 10 1 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 1 ALPLS(0.5)S(0.5)AEKR;ALPLS(0.5)S(0.5)AEKR 53.568999999999996 0.0087494 7768400.0 2045.6299999999999 2361.9 2036.16 1463.8400000000001 2478.1000000000004 2364.0 1682.13 2195.7400000000002 1973.03 2413.0 2709.2 True False 2253.300851686787 2560.945602088772 2174.3460620247515 1554.2580721781494 2304.0468049808933 2344.748367781701 1746.1443776468564 2151.9442431752923 1890.1104104966478 2260.6427681948426 2375.9855750337874 0.9483647019425799 1.0778456018413978 0.9151343698683152 0.6541529917142057 0.9697225560589225 0.986852947433554 0.7349137115960923 0.90570593769059 0.7955058441252404 0.9514547529029908 1.0 11.214310362008513 -5.931669157333869 7.917533006919563 0.8835149832173327 1.0105358868085712 0.19088497608434396 0.1077201033290745 0.33889778326935766 34.20894942447987 0.015733619290131246 0.049294614453835324 1.1703906473604086e-06 5.931669157333869 0.12702090359123852 ALPLSS(ph)AEK ddPTM_A549_PD325901_60min_R1 1 ALPLSSAEK 9 0 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 1 ALPLS(0.135)S(0.865)AEK 128.35 5.125e-05 7864700.0 5148.9 5391.4 5034.7 5311.7 6825.6 5137.0 5546.1 5552.9 5438.2 5857.5 6134.1 True False 5671.612537580155 5845.752199119944 5376.38501811057 5639.791645254041 6346.19340304168 5095.165975166923 5757.159870442374 5442.143053334224 5209.651365849917 5487.656450352794 5379.64458726368 1.0542727211027492 1.0866428263606438 0.9993940921002799 1.0483576663421708 1.1796677828989497 0.9471194411671247 1.0701747628593277 1.01161758273372 0.9684006594383164 1.020077880859422 1.0 12.393295147196852 -8.102875633845334 1.2052909203816449 0.9853282920331404 1.0613982343041195 0.1788596474720363 0.055190073270410714 0.41952311680227145 1.2040424303674986 0.009509284436103731 0.013334054563779119 7.890860508321637e-09 8.102875633845334 0.07606994227097907 ALPLSS(ph)AEKR ddPTM_A549_MK2206_60min_R1 1 ALPLSSAEKR 10 1 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 1 ALPLS(0.156)S(0.844)AEKR 133.07 3.8516e-07 14419000.0 2093.3 2978.2 2594.3 2243.0 3394.3 2512.7 2442.2 1982.0 4060.9 3754.9 3445.8 True False 2446.5978637286357 3129.777659079298 2962.210750196737 2792.5351006920946 2895.002966402021 2778.59224620473 2885.9161276511613 2262.954569620432 3141.112633924755 2906.665482108692 2590.112760758025 0.9445912551747793 1.2083557544279786 1.1436609228278591 1.0781519411049998 1.1177131012453552 1.0727688339682726 1.1142048220350709 0.8736895952584525 1.212732002063676 1.122215807028426 1.0 11.338799191780568 -7.263370487173008 23.594264163640588 1.0833137554515266 1.1059770833969127 0.007274053320944107 0.09957646621010666 499.45511495615716 6102442.391472953 0.016344957325063157 0.027018396584780897 5.4529248546386376e-08 7.263370487173008 0.022663327945386058 ALPLSS(ph)AEKR ddPTM_A549_PD325901_60min_R1 2 ALPLSSAEKR 10 1 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 1 ALPLS(0.009)S(0.991)AEKR;ALPLS(0.438)S(0.562)AEKR 120.96 1.9789e-05 30747000.0 7071.1 6818.6 6960.799999999999 6261.0 8709.6 8174.700000000001 7699.8 7902.5 8339.9 6585.700000000001 8367.0 True False 7788.952866531303 7393.227351878783 7433.2017466907755 6647.727750237319 8097.867742488837 8108.127953513151 7992.820102492233 7744.8784381086825 7989.403005783487 6169.877778077404 7337.912042782996 1.0614671886387512 1.0075382900167347 1.0129859425068333 0.9059426866223493 1.1035656594512162 1.1049639061138217 1.0892499195807823 1.0554607895206305 1.08878424260226 0.8408219861596216 1.0 12.841153896225743 -6.799022686906058 24.999997893893198 1.055913672730225 0.9988799249402949 0.042968832017183045 0.07925097650706443 198.65868677677844 132144.87305619108 0.007666574047253427 0.014488692934049401 1.5884637674155287e-07 6.799022686906058 -0.05703374778993009 ALPNNTS(ph)SSPQPK ddPTM_A549_MK2206_60min_R1 1 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.045)S(0.426)S(0.264)S(0.264)PQPK 87.363 5.2301e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALPNNTSS(ph)SPQPK ddPTM_A549_MK2206_60min_R1 2 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.001)S(0.002)S(0.499)S(0.499)PQPK;ALPNNT(0.103)S(0.067)S(0.415)S(0.415)PQPK 204.31 7.334399999999999e-31 26760900.0 5144.2699999999995 5836.9400000000005 6283.92 5006.3099999999995 7607.26 6378.45 5291.55 5241.92 8650.3 8541.01 8380.9 True False 6012.497010673728 6134.015314413511 7175.074346596879 6232.856174741794 6488.242131276389 7053.413345327556 6252.956140067362 5984.9782127067265 6691.020861690582 6611.589909010936 6299.691228927086 0.9544113817936645 0.9737009468412008 1.1389565116541247 0.9893907412670646 1.0299301815751716 1.1196442950948944 0.9925813683303835 0.9500431045294329 1.0621188592492563 1.0495101535535052 1.0 12.621065403209187 -5.547041137988109 24.999400762916707 1.0318391188980385 0.9592335525196064 0.2148535966953402 0.0535021354833262 218.98789058872399 226573.47192429384 0.007097675837100606 0.027491339096492814 2.8376502229306305e-06 5.547041137988109 -0.07260556637843207 ALPNNTSS(ph)SPQPK ddPTM_A549_PD325901_60min_R1 1 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.003)S(0.027)S(0.812)S(0.159)PQPK 218.58 5.706599999999999e-38 40450000.0 5686.2 6162.7 6216.4 6126.3 7885.6 7049.4 7193.4 7249.6 6876.4 7436.6 7108.1 True False 6263.458838040804 6682.0523569975285 6638.2822862499315 6504.707637163208 7331.742659843162 6991.9920236211165 7467.148773379521 7105.001040798817 6587.408821325144 6967.051806861905 6233.848761958386 1.0047498868216231 1.0718983748489814 1.0648770189548986 1.0434497026712806 1.176118147842244 1.121617204814022 1.1978392576584886 1.139745494654374 1.0567161753304528 1.117616431341395 1.0 12.605907439141033 -9.297847174149227 1.6368536906740327 1.0170497168756947 1.103375157832393 0.0 0.06265488705737943 0.3076212074128332 1.7008116630839378 0.012859047161415765 0.011283148892433294 5.036778190737169e-10 9.297847174149227 0.08632544095669825 ALPNNTSSS(ph)PQPK ddPTM_A549_MK2206_60min_R1 1 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNTSS(0.063)S(0.937)PQPK 220.4 1.7601e-38 24720000.0 7451.4 8846.6 8858.0 8341.6 11352.0 9452.5 8673.6 8061.1 12595.0 12529.0 13665.0 True False 8709.014150760788 9296.854153116283 10114.19759674776 10385.292374468654 9682.135837903474 10452.757275938317 10249.480847103072 9203.785611083384 9742.25261008207 9698.690198231594 10271.603365186147 0.8478729017398111 0.9051025261184041 0.9846756379854106 1.0110682826468784 0.942611926655913 1.0176363810314326 0.9978462449048553 0.8960417652299592 0.9484646421513684 0.9442235893866049 1.0 13.326373778971314 -5.5510843556906195 3.037758478823492 0.974768587360061 0.8523651775774221 0.5442007971762759 0.03499477853938658 0.14623943547374002 2.5555266846393123 0.004961512755185298 0.030917939298611304 2.8113547106311697e-06 5.5510843556906195 -0.12240340978263886 ALPPLPRPPT(ph)PK ddPTM_A549_MK2206_60min_R1 2 ALPPLPRPPTPK 12 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ALPPLPRPPT(1)PK;ALPPLPRPPT(1)PK 128.96 3.2905e-08 77844000.0 14679.099999999999 14799.599999999999 14821.5 12833.900000000001 19421.0 14587.4 13652.6 14177.1 21645.0 21087.0 22061.0 True False 17156.573210461473 15552.83642579744 16923.4115692252 15978.206076135672 16564.196626843128 16131.028985667557 16133.100697883156 16186.747340547838 16742.442059962406 16323.432054442459 16582.64484737443 1.034610182414774 0.9378984214487327 1.0205496001987115 0.9635499175914353 0.9988874983031296 0.9727657520339176 0.972890684590495 0.9761257923286419 1.0096364128918358 0.9843684288412524 1.0 14.0173865072445 -8.764827577634989 24.995603307530637 1.0045505290768537 0.9832791803010026 0.03181374898065226 0.02600655141909967 117.25784895271917 865036.0364676533 0.0037915747672712186 0.0041131675842373825 1.7185905616878029e-09 8.764827577634989 -0.02127134877585113 ALPPLPRPPT(ph)PK ddPTM_A549_PD325901_60min_R1 2 ALPPLPRPPTPK 12 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ALPPLPRPPT(1)PK;ALPPLPRPPT(1)PK 134.88 1.6101e-08 125609000.0 16347.7 15090.9 14668.5 15528.3 18580.699999999997 17026.9 16044.6 17908.4 17327.5 18093.7 18074.800000000003 True False 18007.30646945933 16362.66310451816 15663.99261885612 16487.44782367196 17275.65573193516 16888.23857165071 16655.186032942012 17551.202913131987 16599.28543300438 16951.26069410985 15851.71418559748 1.1359848063511246 1.0322330388334227 0.9881576487852701 1.0401050404158871 1.0898288683271518 1.0653887884879347 1.0506867483186486 1.1072116685701174 1.0471602779771367 1.0693645176564812 1.0 13.952351239683194 -10.062367540739443 0.9155750766781209 1.004500258737545 1.0595564837707745 0.0 0.04234961470920456 0.5422096262103193 0.9133911077001968 0.015589547193770273 0.007437215268040167 8.662284816511291e-11 10.062367540739443 0.0550562250332296 ALPQT(ph)PR ddPTM_A549_MK2206_60min_R1 2 ALPQTPR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ALPQT(1)PR;ALPQT(1)PR 90.601 0.013256 106516000.0 9149.0 8705.9 9947.2 7639.5 17393.3 13381.4 12308.2 12879.3 17832.199999999997 12613.9 12870.7 True False 10693.127528425586 9148.99312409457 11357.86253492541 9511.177842950188 14834.768610765179 14797.410866145576 14544.440620078627 14704.980216202026 13793.235172171924 9764.411229265985 9674.549976750923 1.1052842307003865 0.9456763514665459 1.1739938872836138 0.983113205865561 1.5333807408525322 1.5295192956473933 1.5033712839388522 1.5199652957026235 1.4257236982928079 1.009288416797785 1.0 13.239978838796683 -6.732754696827483 24.999756860896603 1.2975883811409838 1.0531337294600995 0.336228349669625 0.19611209388007114 284.26363729035694 247744.9082539873 0.03425131738914774 0.07128974622292494 1.850313439059282e-07 6.732754696827483 -0.24445465168088432 ALPQT(ph)PR ddPTM_A549_PD325901_60min_R1 1 ALPQTPR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ALPQT(1)PR 106.36 0.010121 50141000.0 4498.6 4803.9 4178.5 3831.2 5038.7 3656.8 4318.8 3929.4 4012.5 5192.6 5735.6 True False 4955.294560305717 5208.741512288514 4462.078137361711 4067.8445227134957 4684.799094571338 3627.020233208174 4483.154297338042 3851.025034445331 3843.868578844618 4864.738349825343 5030.157560964048 0.9851171658638893 1.035502655564976 0.8870652824056943 0.8086912732677659 0.9313424157778231 0.7210549946497188 0.8912552426049313 0.7655873574081978 0.7641646473809315 0.9671145070241097 1.0 12.296387875321388 -5.830019001977259 5.520758053759947 0.8642131306175186 1.0100138602009736 0.3204579900307868 0.08478077261944872 0.2007436837079744 11.144990693693813 0.013968946633578696 0.045834111402118675 1.479043673164296e-06 5.830019001977259 0.14580072958345502 ALPQT(ph)PRPR ddPTM_A549_MK2206_60min_R1 6 ALPQTPRPR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR 116.55 7.5387e-05 3194381000.0 16706.800000000003 16182.3 14858.3 13199.4 21102.8 15934.400000000001 14834.900000000001 14485.1 22220.500000000004 23549.100000000002 24718.0 True False 19526.49939795613 17005.909949808236 16965.430362582654 16433.253592543588 17998.606074710126 17620.56763160132 17530.20930394408 16538.407283758283 17187.592228847057 18229.34195443976 18579.83841790495 1.0509509802377455 0.9152883662012928 0.9131096827103443 0.8844669809780074 0.9687170399375107 0.9483703375278439 0.9435070913776427 0.8901265399499175 0.9250668300906095 0.9811356559954028 1.0 14.181450334730679 -10.701812803318528 0.9899907931649314 0.9995416994048296 0.9347359862938585 0.17396577442909822 0.043367121597417374 0.6102417505252731 1.0753315575635751 0.027213505412935282 0.007330566331005393 1.9869511808656553e-11 10.701812803318528 -0.06480571311097116 ALPQT(ph)PRPR ddPTM_A549_PD325901_60min_R1 8 ALPQTPRPR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR 126.19 2.5466e-05 4878781000.0 30028.0 30358.8 33252.5 33644.6 37077.5 32147.9 33570.99999999999 32824.4 31959.8 35977.399999999994 38594.0 True False 33076.42045455474 32917.24262021786 35509.21461352646 35722.750529569435 34473.30431043101 31886.098161002257 34848.562775756065 32169.69159175634 30616.640749198312 33705.780824058515 33847.182667523244 0.9772281722665189 0.9725253337496337 1.049103996699789 1.0554128206317692 1.018498486242063 0.9420606280355892 1.0295853311653516 0.9504392701677804 0.9045550718339499 0.9958223452494199 1.0 15.04674813297311 -8.276278704337614 23.274672431396475 0.9533327232768414 1.0065709829323717 0.20516361063901833 0.039793827866665285 367.37041423193523 576199.3238469631 0.007669334155075052 0.00929667541902241 5.293236464756976e-09 8.276278704337614 0.05323825965553031 ALPRGS(ph)PHSDLKER ddPTM_A549_PD325901_60min_R1 1 ALPRGSPHSDLKER 14 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 ALPRGS(0.97)PHS(0.03)DLKER 62.055 0.0016015 2548000.0 404.79 502.12 472.34 568.21 549.32 820.32 840.99 483.19 518.9 477.51 578.54 True False 445.88398280935166 544.4354145902932 504.39583281116 603.3070412014604 510.73765825112196 813.6395858962293 872.9943346573859 473.5523963947778 497.0924375233572 447.35993710763375 507.3832476672253 0.8787912980165856 1.0730259958195725 0.9941121137329614 1.1890558940904334 1.0066111969587468 1.6035996254055802 1.7205817075575818 0.9333228847661207 0.9797178756074787 0.8817002515641614 1.0 8.986932076329907 ALPS(ph)EDEEGQDDKDFYLR ddPTM_A549_MK2206_60min_R1 2 ALPSEDEEGQDDKDFYLR 18 1 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20;A0A5F9ZH87;A0A5F9ZHE1;H0Y326;H0Y325;A0A5F9ZH86;A0A5F9ZHB2 Q8NF91 SYNE1 Nesprin-1 1 ALPS(1)EDEEGQDDKDFYLR;ALPS(1)EDEEGQDDKDFYLR 230.71 5.780399999999999e-65 346520000.0 13856.4 15903.1 14859.8 14328.8 22213.9 14914.8 14663.3 14962.4 22952.1 22025.8 23158.8 True False 16195.02156354534 16712.499862367855 16967.143085138 17839.35664324428 18946.2647365754 16493.074236357024 17327.431805170454 17083.366020428235 17753.485996972195 17050.156482417537 17407.83080963579 0.930329674078684 0.9600564277725488 0.9746845124290927 1.024789178980854 1.0883759696290267 0.9474514324454245 0.9953814461236128 0.9813609867446578 1.0198563043906121 0.9794532511758863 1.0 14.087448819462335 -5.849982551757665 2.2905926454721612 1.0083933593507082 0.9392811453368635 0.31340198594314095 0.034058354305179166 0.24816015345909279 2.5198906125924787 0.004531196729623293 0.021295830265970084 1.412594295959727e-06 5.849982551757665 -0.06911221401384471 ALPS(ph)EDEEGQDDKDFYLR ddPTM_A549_PD325901_60min_R1 2 ALPSEDEEGQDDKDFYLR 18 1 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20;A0A5F9ZH87;A0A5F9ZHE1;H0Y326;H0Y325;A0A5F9ZH86;A0A5F9ZHB2 Q8NF91 SYNE1 Nesprin-1 1 ALPS(1)EDEEGQDDKDFYLR;ALPS(1)EDEEGQDDKDFYLR 273.51 1.1807999999999997e-101 703670000.0 22502.4 24227.5 25539.3 23774.4 26545.5 27738.6 27213.4 28022.5 25484.3 25897.1 27512.4 True False 24786.82708260865 26269.236451418634 27272.550478286932 25242.89069242007 24681.035657003467 27512.706038303502 28249.020828743873 27463.569254274033 24413.28349504048 24261.952686373264 24128.54921547305 1.02728211552452 1.0887200973762987 1.1303021261136459 1.0461835258720165 1.0228976237483902 1.1402552964378097 1.1707716272733242 1.1382188381497185 1.0118007210887274 1.0055288641562696 1.0 14.558453552352779 -8.826881508033654 8.400315859636642 1.0053795665184437 1.0963807990579355 0.4316230048491356 0.0458993494682745 0.1899345021322734 22.000137024822237 0.00842427037662108 0.008960466426057702 1.4897674872028295e-09 8.826881508033654 0.09100123253949177 ALPSLNTGSSS(ph)PR ddPTM_A549_MK2206_60min_R1 3 ALPSLNTGSSSPR 13 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 ALPSLNTGSS(0.101)S(0.898)PR;ALPSLNTGS(0.003)S(0.127)S(0.869)PR;ALPSLNT(0.003)GS(0.003)S(0.008)S(0.986)PR 164.65 5.7252e-19 346707000.0 20286.0 23301.1 21433.9 20623.8 28272.9 22176.0 20582.899999999998 22375.8 31368.7 30796.2 34387.2 True False 23709.780854917648 24487.026462955 24473.54931913883 25676.63192583757 24113.993862884145 24522.64960076257 24322.54650062694 25547.638173013547 24263.73953552057 23839.317031110208 25847.909201560848 0.917280414057084 0.9473503745315048 0.946828972830846 0.993373650673729 0.9329185457455879 0.9487285570966703 0.9409869986373289 0.9883831598832308 0.9387118836697006 0.9222918900407872 1.0 14.6577599673805 -10.926448648022783 0.8288339543410204 1.0049855234089782 0.9505889206218922 0.0 0.03131959779073653 0.6081219096495476 0.6222416640767406 0.022864339903435272 0.003735769829464801 1.1845444219704245e-11 10.926448648022783 -0.054396602787086024 ALPSLNTGSSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ALPSLNTGSSSPR 13 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 ALPSLNTGSS(0.003)S(0.997)PR;ALPSLNTGSSS(1)PR 246.84 2.1853e-57 722150000.0 20861.3 21947.0 20550.5 21513.4 24339.0 21300.8 22217.0 23929.0 23587.0 23387.0 23706.0 True False 22979.123818722634 23796.550713003195 21945.18051019549 22842.233857523643 22629.512604991716 21127.333347057724 23062.48009260888 23451.717323062654 22595.72041600199 21910.340828749624 20790.312284715394 1.105280358660914 1.1445980410067205 1.0555483828075602 1.0986960438452278 1.0884642950567156 1.0162104858131498 1.1092897392197392 1.1280117875046962 1.086838913555613 1.0538726176257416 1.0 14.343623808175101 -10.485014613340123 0.7138744965791121 0.996547217230409 1.0926295544953937 0.2871811633701028 0.03616962973240429 0.487447081360254 0.427812583005959 0.026436021944861388 0.00675315893055151 3.2732968055415466e-11 10.485014613340123 0.09608233726498472 ALPTSKPEGSLHS(ph)SPVGPSSSK ddPTM_A549_PD325901_60min_R1 1 ALPTSKPEGSLHSSPVGPSSSK 22 1 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 ALPT(0.001)S(0.001)KPEGS(0.004)LHS(0.552)S(0.443)PVGPSSSK 75.71 7.729e-05 4632200.0 2143.7 2413.8 1944.3 2622.3 2419.8 1992.9 1992.7 2307.4 2634.6 2643.7 2452.1 True False 2361.3268458914686 2617.219397231838 2076.251890025697 2784.2735153245985 2249.8415958568135 1976.6704831438904 2068.53328894728 2261.3770968797185 2523.8769240682955 2476.7763308233352 2150.5072451426063 1.098032499646325 1.2170242174925956 0.9654707719378154 1.2947054801203264 1.0461911258093064 0.9191647633871662 0.9618815717173321 1.0515552095848717 1.173619354117047 1.151717268759582 1.0 11.07046127644858 ALQALEELR ddPTM_A549_MK2206_60min_R1 1 ALQALEELR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 84.476 0.00374 567050.0 293.83 429.05 267.76 262.75 486.44 386.19 320.34 165.47 398.44 458.59 406.72 False True 343.42132054621163 450.88681237928 305.7323942769452 327.12376179529554 414.8853203831717 427.0563694678255 378.5416314518766 188.9258792306221 308.1939761779359 354.99420049541277 305.72019909904964 1.1233190399530888 1.474834877473039 1.0000398899972311 1.0700102994807725 1.3570752655723408 1.3968863383131072 1.238196339553062 0.6179698946532884 1.0080916376679605 1.1611735225267172 1.0 8.25606806479098 -8.074261425889864 24.999963650888304 0.9727551883736361 1.2418197724820672 0.3723715893485692 0.18015371223318472 108.219928930843 36431.557766621976 0.02693756343285355 0.03477625207482506 8.428272606497875e-09 8.074261425889864 0.26906458410843115 ALQALEELR ddPTM_A549_PD325901_60min_R1 2 ALQALEELR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 120.07 0.00039964 3720400.0 885.3599999999999 992.4200000000001 941.0600000000001 764.29 941.55 925.0500000000001 772.5999999999999 897.23 1026.05 1168.86 1212.1599999999999 False True 975.2410954324163 1076.0547162982932 1004.9259906534913 811.4984574714701 875.418776171164 917.5166994993506 802.0017157829424 879.3340437866813 982.9286866849887 1095.0579801211045 1063.072004515338 0.917380094001286 1.0122124481952417 0.9453037859948575 0.7633522978920304 0.8234802275413824 0.8630804833560196 0.754418997374106 0.8271632025410883 0.9246115808807446 1.0300882494035286 1.0 10.054023602169934 -9.338393154614698 1.4457096203809638 0.9789361330917739 0.8643839809735782 0.35028478343096636 0.0748001360035556 0.3467657032381148 1.4978020877197409 0.018511952003226948 0.015727460586627936 4.587825018576297e-10 9.338393154614698 -0.1145521521181957 ALQAPHS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 ALQAPHSPSK 10 0 Q96AQ6-3;Q96AQ6-2;Q96AQ6;F2Z2Z8;Q5T173 Q96AQ6-3 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 1 ALQAPHS(0.952)PS(0.048)K 51.726000000000006 0.007562100000000001 4265900.0 10136.0 11117.0 11741.0 12351.0 13837.0 12546.0 12203.0 13691.0 14411.0 13616.0 14582.0 True False 11164.999258271178 12053.8686051149 12537.814864368525 13113.8932188438 12865.136855058563 12443.829535613038 12667.391842737827 13417.922264618279 13805.35578560243 12756.283436278907 12788.506442914024 0.8730495080180052 0.9425548369484398 0.9803971183292945 1.0254436886263656 1.0059921314882707 0.9730479154200241 0.9905294179021737 1.0492173049694171 1.079512752112803 0.9974803150955153 1.0 13.642560162672694 -3.4400602650286256 0.4784163375892464 1.034005640008684 1.341033480877094e-19 0.671802744595196 0.029631419035252626 9.768968752909577 0.3800882111274947 0.007075948083207578 8.395828418613364 0.0003630276756099004 3.4400602650286256 -1.034005640008684 ALQEGEGDLS(ph)ISADR ddPTM_A549_PD325901_60min_R1 1 ALQEGEGDLSISADR 15 0 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 ALQEGEGDLS(0.5)IS(0.5)ADR 75.383 0.00067527 3411200.0 481.56 339.6 378.75 657.53 555.17 394.81 446.8 370.98 548.34 496.13 458.55 True False 530.4476166942651 368.2192838263038 404.45425260877084 698.1441347410226 516.176774432526 391.5947982588382 463.80321849834144 363.58051287182013 525.2951767037156 464.80426712992454 402.15125698794606 1.3190251366295358 0.9156238540299793 1.0057266900968405 1.7360237537736916 1.2835388811130777 0.9737500292597014 1.1533054054640026 0.9040889629314722 1.306212942458764 1.155794639587205 1.0 8.651594419197039 -7.219546690223333 24.892840124950038 1.1179720247855123 1.2465105249746333 0.11739130751831361 0.219977795342252 1139.7830282404161 677265.1019851086 0.034563201081502945 0.05986492137573419 6.031888566850325e-08 7.219546690223333 0.12853850018912105 ALQEGEGDLS(ph)ISADRLSEKR ddPTM_A549_MK2206_60min_R1 1 ALQEGEGDLSISADRLSEKR 20 2 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 ALQEGEGDLS(0.392)IS(0.278)ADRLS(0.33)EKR 67.992 0.00026038 2548600.0 358.01 482.69 600.04 679.71 459.77 408.23 315.13 477.85 805.3 1006.4 946.61 True False 418.4333354958625 507.2568592643157 685.134694733859 846.2389805133414 392.13844205363625 451.42862763885734 372.38504189120914 545.58670085425 622.9008357998487 779.0535410248441 711.5406118930741 0.5880666942995828 0.7128993774715745 0.9628890934433645 1.1893052432550524 0.5511118206033816 0.6344383160896727 0.5233503691384082 0.766768181232412 0.8754255560235742 1.0948827487894892 1.0 9.474802292140888 -9.109821335576418 1.6634494509694058 0.9588022108240937 0.7466910871485587 0.2568836120661221 0.18910351645401105 0.4229547499282425 2.4021218903095507 0.04105585986881555 0.03880650651378141 7.765665226555238e-10 9.109821335576418 -0.21211112367553497 ALQEGEGDLSIS(ph)ADR ddPTM_A549_MK2206_60min_R1 2 ALQEGEGDLSISADR 15 0 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 ALQEGEGDLS(0.403)IS(0.597)ADR;ALQEGEGDLS(0.001)IS(0.999)ADR 149.44 6.9102e-14 6316300.0 1047.99 1290.66 1415.1100000000001 1185.8600000000001 1751.4 1359.7800000000002 1351.4499999999998 1231.77 1703.8700000000001 1377.17 1925.88 True False 1224.865091104464 1356.3490811454187 1615.7938768495965 1476.395753235279 1493.7713800655501 1503.6710170510876 1596.9909715478518 1406.3771696374167 1317.9461655212806 1066.0663405138957 1447.630844416005 0.846117016523361 0.936944032642928 1.116164306033028 1.0198703342984365 1.0318731365993787 1.038711645894565 1.1031755628225102 0.9715026279401842 0.9104159189513256 0.736421405102046 1.0 10.499478037062365 -8.501878401827014 23.71574663243418 0.9568154982859007 1.0177432069104468 0.15329714921258775 0.0982597159009142 657.8269246365638 742886.5008781218 0.012646593347216411 0.01519734662174642 3.148629775988452e-09 8.501878401827014 0.060927708624546106 ALQEGEGDLSIS(ph)ADR ddPTM_A549_PD325901_60min_R1 1 ALQEGEGDLSISADR 15 0 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 ALQEGEGDLS(0.001)IS(0.999)ADR 108.63 3.6076999999999998e-06 3094500.0 491.03 591.58 514.26 610.44 609.59 608.89 538.28 577.08 520.1 734.22 583.81 True False 540.8790041228192 641.4345227501907 549.160776096598 648.1454923901717 566.774501371334 603.9314017168361 558.7645399581183 565.569686689498 498.24200569646973 687.8612238972308 512.005071076508 1.0563938419312973 1.2527893940611816 1.072569017611425 1.2658966268193865 1.1069704840611665 1.1795418362694141 1.0913261831241183 1.1046173536921589 0.9731192791682689 1.3434656466409196 1.0 9.000014289024804 -8.470660881140446 1.6290154748804255 0.9865234164459682 1.1567526635082201 0.0 0.12561723506372424 0.1683152547396729 0.8691068805837453 0.010482406274187082 0.01255176149068084 3.3832891723415366e-09 8.470660881140446 0.17022924706225195 ALQEGEGDLSIS(ph)ADRLSEKR ddPTM_A549_PD325901_60min_R1 2 ALQEGEGDLSISADRLSEKR 20 2 P49589-3;B4DKY1;P49589-2;P49589 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 ALQEGEGDLS(0.001)IS(0.971)ADRLS(0.028)EKR;ALQEGEGDLSIS(0.959)ADRLS(0.041)EKR 165.62 3.4312999999999997e-28 11643600.0 887.51 1004.05 1249.3400000000001 978.74 1083.23 1661.8899999999999 1398.3000000000002 1901.0900000000001 1329.47 1276.56 1508.8899999999999 True False 977.6093618496694 1088.6648172137814 1334.127725291728 1039.194546920183 1007.1476617406294 1648.356118837873 1451.5130716791207 1863.1712685737473 1273.5969992564617 1195.9577837409076 1323.3060956417871 0.7387628342900824 0.8226855606569184 1.0081777222107426 0.7853017154101346 0.761084427146219 1.2456347962626444 1.0968838399970906 1.4079669660027767 0.9624356779213527 0.9037650379452706 1.0 10.369931096533147 -7.2360118707791825 24.92374298632319 1.043336468263764 0.8313445355544374 0.4323410350584205 0.15124432381503364 736.0964688898277 721513.4547185315 0.02330357576508747 0.04035267786764329 5.807485434261408e-08 7.2360118707791825 -0.2119919327093266 ALQEIRNS(ph)LLPFANETNSSR ddPTM_A549_MK2206_60min_R1 1 ALQEIRNSLLPFANETNSSR 20 1 O95835-2;O95835;Q6PJG3 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 ALQEIRNS(1)LLPFANETNSSR 50.028999999999996 0.004048400000000001 1449200.0 538.94 603.04 845.5 477.41 899.71 799.61 743.81 536.02 1014.9 1016.8 768.85 True False 629.8998961820624 633.7321602079035 965.4046136882176 594.3754714317494 767.3638508386301 884.224199461839 878.9506489674108 612.002476492404 785.0267704622697 787.1041738017308 577.9233258194927 1.0899367927205001 1.0965678869411857 1.670471791944508 1.0284676961064474 1.3277952568370754 1.5300026144610326 1.520877614207841 1.0589682906890585 1.3583579955854963 1.3619525958493206 1.0 9.174734290117337 -10.822199402572366 0.8033235932998198 0.9759366055746694 1.3073784886169577 0.0 0.2307010176915311 0.9145359923658615 0.9164369231506061 0.19946127909431452 0.03696049531940012 1.5059154793034643e-11 10.822199402572366 0.3314418830422883 ALQEIRNS(ph)LLPFANETNSSR ddPTM_A549_PD325901_60min_R1 2 ALQEIRNSLLPFANETNSSR 20 1 O95835-2;O95835;Q6PJG3 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 ALQEIRNS(0.997)LLPFANET(0.001)NS(0.001)S(0.001)R;ALQEIRNS(1)LLPFANETNSSR 64.27 0.00051677 4973500.0 3546.6 3297.0 3176.1000000000004 3531.1 4036.4 3998.2 3523.3 3642.4 3828.8 3901.3 4391.2 True False 3906.6482211310754 3574.8497608225075 3391.6492454408362 3749.2080272900484 3752.897188824053 3965.6399847989856 3657.3811095237365 3569.7494745924782 3667.8888510106585 3654.971252199976 3851.1102381102764 1.0144212914164854 0.9282647184300471 0.8806938871490483 0.973539523794512 0.9744974713228629 1.0297394100940898 0.9496952523795834 0.9269403506725217 0.9524237490564477 0.9490694958639914 1.0 11.91105870556347 -8.008105806841362 0.005301397270663967 1.926658013160218 4.263947123815258e-08 0.0 0.041810932434995875 8266.94680784472 25.404524202841735 4581.466238412421 4649.822503181216 9.815087896329471e-09 8.008105806841362 -1.9266579705207467 ALQESATGQPEPTS(ph)SPDNKPFK ddPTM_A549_PD325901_60min_R1 1 ALQESATGQPEPTSSPDNKPFK 22 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ALQESATGQPEPT(0.001)S(0.584)S(0.415)PDNKPFK 145.89 1.7554000000000004e-27 35553000.0 3475.5 3739.5 3894.1 3533.5 4603.4 3856.2 3632.3 3850.8 3650.2 4093.7 4271.5 True False 3828.3302014721253 4054.640788776392 4158.3770431255825 3751.756269839252 4280.073064867861 3824.796385719036 3770.5291641708277 3773.992773105839 3496.7947879124313 3835.223083364785 3746.1325792694593 1.0219419949676996 1.0823537883347139 1.1100453481378163 1.0015011990234712 1.142531123578794 1.020998671238944 1.0065124723658676 1.0074370549484966 0.933441279484654 1.0237819944196154 1.0 11.871186243524917 -7.850085433093006 1.6175674167170206 0.9702701999270328 1.070384773363047 0.37416088109269385 0.04401698848258246 0.21219893494078962 1.1305346638230453 0.0070389805341898055 0.010610606744823283 1.4122597018511343e-08 7.850085433093006 0.10011457343601415 ALQESATGQPEPTSS(ph)PDNKPFK ddPTM_A549_MK2206_60min_R1 2 ALQESATGQPEPTSSPDNKPFK 22 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ALQESATGQPEPT(0.008)S(0.319)S(0.672)PDNKPFK;ALQESATGQPEPT(0.001)S(0.209)S(0.79)PDNKPFK 138.92 4.4354999999999995e-23 44041000.0 5446.1 6261.200000000001 5087.3 5029.3 6997.5 5572.3 5270.200000000001 4742.8 7404.3 8324.0 7553.6 True False 6365.268535638716 6579.868336252532 5808.755637156795 6261.4787257738535 5968.177019532198 6161.957087406619 6227.727121426237 5415.1064242158345 5727.237872237448 6443.602618730927 5677.832651245528 1.1210736431695265 1.1588697202636162 1.0230586200673857 1.1027938141854696 1.0511364786743016 1.0852657106853776 1.0968493620642519 0.9537277261998802 1.008701422536834 1.1348701193786357 1.0 12.471124612277377 -6.821934972740689 0.3660522369577397 0.9951566952959126 1.1511802858180773 0.09296407988594857 0.058411077154712984 1.279050629929439 0.2499688828858069 0.014140192852327683 0.07605152606170959 1.506832668554317e-07 6.821934972740689 0.15602359052216475 ALQESATGQPEPTSS(ph)PDNKPFK ddPTM_A549_PD325901_60min_R1 1 ALQESATGQPEPTSSPDNKPFK 22 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ALQESATGQPEPTS(0.177)S(0.823)PDNKPFK 141.36 2.7356999999999996e-27 35409000.0 2966.2 2846.2 3024.0 2733.3 3390.6 3469.1 3839.2 3620.0 3664.4 3447.1 4313.1 True False 3267.3264403989697 3086.0592627397677 3229.226824789234 2902.129733225308 3152.4559529349967 3440.848799776439 3985.3028568908517 3547.796260164937 3510.3980112942595 3229.4495177142353 3782.6160429935853 0.8637742777120957 0.8158531629071826 0.8537019851038341 0.7672282093237633 0.8334062767946503 0.9096479157988582 1.0535837662595167 0.9379213274200544 0.9280344532447203 0.8537608578317215 1.0 11.885168626742798 -7.404261851660017 3.5666633564446504 0.968945386209053 0.8244051230099277 0.566097781138754 0.05255272972914239 0.09892493908101704 2.3007447632814295 0.006475208046491295 0.010567291926682654 3.9421954135873765e-08 7.404261851660017 -0.14454026319912527 ALQEVGSGGTLGLSS(ph)PKS ddPTM_A549_MK2206_60min_R1 2 ALQEVGSGGTLGLSSPKS 18 1 A0A0M3HER3 A0A0M3HER3 1 ALQEVGSGGTLGLS(0.184)S(0.81)PKS(0.006);ALQEVGSGGTLGLS(0.206)S(0.794)PKS 188.04 5.4587e-40 7804000.0 3039.4 3520.2799999999997 3148.4 3029.6 4105.5 3081.5 2772.6 2759.8 4718.7 3805.4 4036.5 True False 3552.3764138044326 3699.447215668411 3594.890462135994 3771.852136003914 3501.5863885229646 3407.582284665849 3276.3455308842877 3151.0101015330315 3649.921984215501 2945.757497034919 3034.1256482673894 1.1708072853980143 1.2192795040577662 1.184819245764863 1.2431430247978679 1.1540676934465501 1.1230854221913054 1.0798318562565845 1.0385232738572934 1.2029567682207745 0.9708752499149361 1.0 11.567065115922318 -7.184749585748232 2.263643707148762 1.092496778948798 1.2037772001604645 0.4931130858220979 0.062338649091638026 0.2878177214972229 2.8811743422022915 0.011359752273116626 0.021120507960826457 6.535072563978681e-08 7.184749585748232 0.11128042121166648 ALQEVGSGGTLGLSS(ph)PKS ddPTM_A549_PD325901_60min_R1 2 ALQEVGSGGTLGLSSPKS 18 1 A0A0M3HER3 A0A0M3HER3 1 ALQEVGSGGTLGLS(0.086)S(0.904)PKS(0.01);ALQEVGSGGTLGLS(0.021)S(0.979)PKS 192.16 1.8805000000000002e-40 9725900.0 4857.9 4638.700000000001 5087.9 4486.9 5414.3 5761.299999999999 5138.1 5624.6 5234.1 4900.6 6339.299999999999 True False 5351.070431803034 5029.619528519068 5433.195490028157 4764.045622510752 5034.018246320993 5714.381882952927 5333.633207176204 5512.412940586662 5014.128979073051 4591.175279658371 5559.606288133648 0.9624908949441778 0.9046718900318935 0.9772626348784264 0.8569034164665705 0.9054630823527083 1.02783930854054 0.959354481370424 0.9915113867599376 0.9018856226879127 0.8258094263721005 1.0 12.440767004612892 ALQHTES(ph)PSETNKPHSK ddPTM_A549_MK2206_60min_R1 4 ALQHTESPSETNKPHSK 17 1 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 ALQHTES(0.999)PS(0.001)ETNKPHSK;ALQHT(0.122)ES(0.873)PS(0.005)ETNKPHSK;ALQHT(0.144)ES(0.843)PS(0.011)ET(0.001)NKPHSK;ALQHTES(0.999)PS(0.001)ETNKPHSK 165.06 3.2812e-22 182759000.0 3839.12 4188.67 4150.6900000000005 3041.75 3985.3 3203.3300000000004 3595.3599999999997 3544.08 5286.3099999999995 6072.1 5571.129999999999 True False 4487.069598527629 4401.855411743897 4739.320255457772 3786.9788865493456 3399.0676492949874 3542.3042544016407 4248.590372906347 4046.4641932898007 4088.969225502418 4700.4083927434 4187.664665634067 1.0714968739857846 1.0511480176212722 1.13173346814296 0.9043176063324897 0.8116857295640992 0.8458901409827402 1.0145488505257512 0.9662818101212775 0.9764318664429866 1.1224414484085004 1.0 12.031930205298474 -6.259453182537719 24.99090729639794 0.9614705810009849 1.0814283100702047 0.3318704137382885 0.0815014641898901 153.7624710105563 1934664.1177164973 0.010473483080792649 0.0262898343520743 5.502332331113874e-07 6.259453182537719 0.11995772906921975 ALQHTES(ph)PSETNKPHSK ddPTM_A549_PD325901_60min_R1 8 ALQHTESPSETNKPHSK 17 1 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 ALQHT(0.002)ES(0.996)PS(0.002)ETNKPHSK;ALQHTES(1)PSETNKPHSK;ALQHTES(1)PSETNKPHSK;ALQHTES(0.996)PS(0.003)ETNKPHSK;ALQHTES(1)PSETNKPHSK;ALQHTES(1)PSETNKPHSK;ALQHT(0.004)ES(0.995)PSETNKPHSK;ALQHTES(0.998)PS(0.002)ETNKPHSK 194.18 1.6998999999999997e-40 283284000.0 15070.09 15396.380000000001 14372.630000000001 14156.03 18123.6 17663.579999999998 14968.370000000003 16973.31 16203.699999999999 16328.149999999998 19243.8 True False 16599.99444278611 16693.88697620031 15348.04310144528 15030.415822423238 16850.66085902575 17519.73366082128 15537.999511356362 16634.7640167459 15522.71483888461 15297.187822420477 16876.934596499043 0.9835906128491851 0.9891539770298864 0.9094094080704137 0.8905892083945832 0.9984432162533389 1.0380874299563607 0.9206647938648509 0.985650795861745 0.9197591393228868 0.9063961073590776 1.0 14.042765266767832 -6.82696618680119 24.99999999995619 0.9678577420580695 0.9440475301694633 0.058286160050023406 0.04591641391499178 148.52136831074415 56663.023560269125 0.006862690140087787 0.012969268811485407 1.4894770405537113e-07 6.82696618680119 -0.023810211888606214 ALQKS(ph)PGPQR ddPTM_A549_MK2206_60min_R1 2 ALQKSPGPQR 10 1 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 ALQKS(1)PGPQR;ALQKS(1)PGPQR 88.803 0.00019411 45354000.0 9780.4 11487.6 10555.8 9777.0 10456.599999999999 7756.799999999999 9000.4 7297.799999999999 12765.3 16653.4 17128.4 True False 11431.092412177682 12072.269772493228 12052.771166375029 12172.36543890621 8918.447991774261 8577.619427452877 10635.656176935354 8332.285498575175 9873.979931995289 12891.38537371139 12874.94556020888 0.8878555919884004 0.9376559858865431 0.9361415246387642 0.9454304394517944 0.6926979186100396 0.6662256851759236 0.8260738755902595 0.647170542167325 0.7669143054485347 1.001276884117733 1.0 13.652278711636939 ALQKS(ph)PGPQR ddPTM_A549_PD325901_60min_R1 2 ALQKSPGPQR 10 1 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 ALQKS(1)PGPQR;ALQKS(1)PGPQR 92.781 0.0001709 82824000.0 16295.0 14651.3 16655.2 16641.800000000003 18408.5 21407.9 19239.2 20156.2 19873.0 16921.3 19433.0 True False 17949.256404255015 15886.016469741813 17785.52202785373 17669.72618972998 17115.550465877404 21233.56116016662 19971.35828409421 19754.168778766987 19037.806920219096 15852.886230192871 17042.86419593665 1.0531830916386968 0.9321212847268564 1.0435758815759468 1.0367814932153707 1.004264909296061 1.2458915893508742 1.1718310991914005 1.1590873782516418 1.117054428254969 0.9301773485921754 1.0 14.056880192462517 ALQLEEER ddPTM_A549_MK2206_60min_R1 2 ALQLEEER 8 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 85.67 0.008128699999999999 12273100.0 2716.3 3518.0 2760.5 2576.6000000000004 3918.3 2918.8 3251.5 3462.8 4562.299999999999 4765.799999999999 4649.4 False True 3174.745032841013 3697.051173407079 3151.980409327407 3207.8671156679707 3341.923260540624 3227.665478657369 3842.255461902282 3953.6625043802396 3528.9463344960236 3689.2024700081506 3494.8256630879237 0.9084129907744535 1.057864262717035 0.90189918273131 0.9178904543220033 0.9562489184618728 0.9235555045700048 1.0994126266394015 1.1312903376378727 1.00976319699391 1.055618455871267 1.0 11.771004774233695 -7.731038075833602 24.999972716074694 1.022707687780017 0.9468871110021737 0.4437523018861469 0.057787301695897325 211.27417136657175 173737.24100811142 0.009196917728771212 0.013640309584088005 1.8576415832260428e-08 7.731038075833602 -0.07582057677784326 ALQLEEER ddPTM_A549_PD325901_60min_R1 2 ALQLEEER 8 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 106.68 0.0052269 22173000.0 5685.7 5751.0 6627.9 6065.299999999999 7017.5 6782.1 5990.8 6884.8 6863.700000000001 7155.200000000001 7843.3 False True 6262.908078408883 6235.656953136258 7077.709150800458 6439.939805704262 6524.6150090607425 6726.8688261980915 6218.783172291544 6747.477262978889 6575.2425581597045 6703.419450885934 6878.623822775175 0.9104885279047166 0.9065268160892811 1.0289426102014927 0.9362250315799467 0.9485349362262977 0.9779381747734741 0.9040737409859668 0.9809341863757604 0.9558950638337028 0.9745291534464876 1.0 12.747904244553109 ALQLSNS(ph)PGASSAFLK ddPTM_A549_MK2206_60min_R1 2 ALQLSNSPGASSAFLK 16 0 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 ALQLSNS(0.98)PGAS(0.02)SAFLK;ALQLSNS(1)PGASSAFLK 251.42 2.2958999999999994e-77 57215000.0 18381.6 20361.4 20205.3 16634.0 24494.0 20428.4 19191.1 21007.0 28356.0 27764.0 29916.0 True False 21483.964693027403 21397.70828942891 23070.715364819083 20709.330746728647 20890.965047005586 22590.11972872557 22677.874456377947 23984.806581239365 21933.411275227256 21492.093117064556 22487.03156040314 0.9553935402864818 0.9515577114725808 1.0259564630773117 0.9209455099087066 0.929022801025991 1.0045843386685132 1.008486798066796 1.066606168840605 0.9753804639047717 0.9557550119202686 1.0 14.456805607773402 -7.28409581705488 24.199283613774515 0.9973119438294812 0.9581715390984316 0.278920250339849 0.035772427302687766 608.2017614911781 649616.9184376172 0.005242072092029235 0.008384050255388228 5.198812840720269e-08 7.28409581705488 -0.03914040473104963 ALQLSNS(ph)PGASSAFLK ddPTM_A549_PD325901_60min_R1 2 ALQLSNSPGASSAFLK 16 0 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 ALQLSNS(0.632)PGAS(0.368)SAFLK;ALQLS(0.002)NS(0.691)PGAS(0.154)S(0.154)AFLK 250.46 2.5159999999999997e-77 128436000.0 45518.0 45571.0 46469.0 47035.0 58271.0 50327.0 50437.0 52739.0 54292.0 54261.0 57010.0 True False 50138.95385141945 49411.428101438425 49622.66578079727 49940.24512576456 54178.245984036854 49917.15359786367 52356.407635185395 51687.0792720549 52010.29604551575 50834.95119975978 49998.13141616571 1.002816553964419 0.9882654951673338 0.9924904066465365 0.9988422309242054 1.0836054158319925 0.9983803831061603 1.0471672871009974 1.033780219541227 1.0402447966025279 1.0167370211624251 1.0 15.609586557496698 -6.553188189538319 24.99998042134827 1.0254626250704524 0.9941928642934209 0.3467090497853029 0.02278296972461564 204.74305440843207 168876.53918530617 0.0034632227321076885 0.007209349933160239 2.797768721001821e-07 6.553188189538319 -0.031269760777031474 ALQS(ph)PALGLR ddPTM_A549_MK2206_60min_R1 2 ALQSPALGLR 10 0 P46940;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 ALQS(1)PALGLR;ALQS(1)PALGLR 126.76 4.2083e-06 14044500.0 1818.48 2116.0699999999997 2074.29 1719.22 2132.83 1871.88 2297.0 1894.29 3039.1 3058.2 3291.3999999999996 True False 2125.394966432547 2223.7689245342576 2368.4555128649695 2140.4289771787185 1819.0935323428164 2069.9610991466184 2714.3351671504065 2162.8114085198226 2350.748702445448 2367.350495987856 2474.054541981242 0.8590736098851378 0.8988358529692908 0.9573174207260168 0.8651502789686465 0.7352681606146291 0.836667528553747 1.0971201811002702 0.8741971415019115 0.9501604198923401 0.9568707786417932 1.0 11.272661590384008 -7.716156398554264 24.999992068672956 0.9747964905671932 0.8597049221029192 0.409609749552306 0.06990356205720659 103.71157811458465 57257.181900476644 0.010836246888010551 0.01607271617241685 1.9223993079180013e-08 7.716156398554264 -0.11509156846427404 ALQS(ph)PALGLR ddPTM_A549_PD325901_60min_R1 2 ALQSPALGLR 10 0 P46940;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 ALQS(1)PALGLR;ALQS(1)PALGLR 124.21 2.3203e-05 25965000.0 3896.8 3434.8 3249.8999999999996 3589.9 3897.0 3450.3 3170.7 3976.9 3638.2 3618.7999999999997 4236.8 True False 4292.400267327458 3724.2626504316504 3470.45775723629 3811.6399697455568 3623.288163920157 3422.2019007433178 3291.362723573615 3897.5776096823033 3485.2991061813036 3390.3083504117285 3715.7004592880376 1.1552062159902743 1.0023043276059054 0.9339982582722133 1.0258200335330319 0.9751292397273628 0.9210112435702212 0.885798723453685 1.0489482810541502 0.9379924846926759 0.9124277878581587 1.0 11.85941848839613 -5.282249897526824 3.333336174878559 0.9684746212175963 1.176029217469175 0.5739820632058481 0.04789907283434345 0.15355731284351612 2.8216983652110015 0.006113223153439311 0.0789159152829281 5.220956833061498e-06 5.282249897526824 0.2075545962515788 ALQS(ph)PKRPR ddPTM_A549_PD325901_60min_R1 2 ALQSPKRPR 9 2 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 ALQS(1)PKRPR;ALQS(1)PKRPR 87.568 0.00023485 38370000.0 1845.21 2090.78 3746.0 3758.9 2664.4 8814.8 5867.3 5948.6 4622.5 3184.1 4194.700000000001 True False 2032.534360828192 2266.9773681930483 4000.226086527933 3991.078715918712 2477.261735681003 8743.015191337628 6090.5833122097565 5829.950506413574 4428.2324001767565 2983.0553825980933 3678.778492394149 0.5525025127309088 0.6162310051774005 1.0873788935099993 1.0848923696194923 0.673392470028496 2.3766082163994806 1.655599358537623 1.5847517099675774 1.2037235754563909 0.8108820329262937 1.0 11.845011095644015 -5.807804241885106 1.2013337328575193 1.2451250325761312 0.4504995527285711 0.2728836696572954 0.4428445200030552 0.8283008044954269 1.7302210987661129 0.06780678200220362 0.6399759735500102 1.556667140764125e-06 5.807804241885106 -0.79462547984756 ALRAS(ph)ESGI ddPTM_A549_MK2206_60min_R1 1 ALRASESGI 9 1 P48960-2;P48960-3;P48960 P48960-2 CD97 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta 1 ALRAS(0.988)ES(0.012)GI 108.93 0.0003522 90541000.0 4069.4 3903.0 3432.5 2855.9 3654.0 3073.8 2935.4 3218.1 4865.8 4289.7 4807.5 True False 4756.215232722166 4101.646028939123 3919.2801141156797 3555.5956282062243 3116.5014404245308 3399.067475776693 3468.724183566955 3674.2755300179197 3763.7040690859335 3320.6537906739613 3613.6650697499012 1.3161748919501661 1.1350376832856275 1.0845720448538774 0.9839305966593922 0.8624212206363168 0.9406149740412826 0.9598908909969962 1.016772572747649 1.0415198964043495 0.918915761859408 1.0 11.819247081788005 -5.399953103002641 1.4222212559900933 0.997919872595271 1.389831438837818 0.7716585931929998 0.056193365282950075 0.3706769509730539 0.8034585330276282 0.008560937973909537 0.19067869038097526 3.981501622095639e-06 5.399953103002641 0.39191156624254686 ALRAS(ph)ESGI ddPTM_A549_PD325901_60min_R1 1 ALRASESGI 9 1 P48960-2;P48960-3;P48960 P48960-2 CD97 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta 1 ALRAS(0.992)ES(0.008)GI 93.325 0.00010609 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALRASES(ph)GI ddPTM_A549_MK2206_60min_R1 1 ALRASESGI 9 1 P48960-2;P48960-3;P48960 P48960-2 CD97 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta 1 ALRAS(0.033)ES(0.967)GI 110.47 0.00029915 76486000.0 3701.5 3735.3 2569.1 3021.2 4026.2 3109.8 2699.0 2894.4 4647.5 4653.6 4710.9 True False 4326.2227070135905 3925.4108152437366 2933.4370112671772 3761.3941356268206 3433.9513134748895 3438.8769718818285 3189.37336357812 3304.690063728244 3594.848670532466 3602.348527934437 3541.0535157742734 1.2217332180215963 1.1085432055057267 0.8284079859848611 1.0622245947063493 0.9697541418613762 0.971145156819212 0.9006848807481928 0.9332505281286755 1.0151918502554542 1.0173098237253726 1.0 11.78996293193758 -5.529473191879361 24.93420993155012 0.9845784698107468 1.193435766416289 0.6070113387363735 0.06291273694001547 64.31644552991827 243187.92572203986 0.008281094348187443 0.03223590258530767 2.954791276143781e-06 5.529473191879361 0.2088572966055421 ALRASES(ph)GI ddPTM_A549_PD325901_60min_R1 1 ALRASESGI 9 1 P48960-2;P48960-3;P48960 P48960-2 CD97 CD97 antigen;CD97 antigen subunit alpha;CD97 antigen subunit beta 1 ALRAS(0.301)ES(0.699)GI 72.275 0.0022629 66702000.0 1866.8 1908.7 2376.8 2279.1 2580.2 2369.1 2873.0 2504.9 3558.2 4324.8 3692.9 True False 2056.3161617344736 2069.5528475832316 2538.1039408594747 2419.8748307883498 2398.9756532067713 2349.8068350726026 2982.333587165925 2454.9378044439645 3408.661227973809 4051.731389925014 3238.696711221862 0.6349208787008301 0.6390079195783825 0.7836806490910737 0.7471754988368159 0.7407225396853262 0.7255408717125882 0.9208437384187114 0.758001759145206 1.0524792939589038 1.2510376090129225 1.0 11.661197657487085 -8.229301780090864 0.8928175305477708 1.0275955301588109 0.7028751391509663 0.7091550598566625 0.09892797151764986 0.17306046088915936 0.2731553884284595 0.015226418506175747 0.020710528132867195 5.897911070430265e-09 8.229301780090864 -0.32472039100784456 ALRPGDLPPS(ph)PDDVKR ddPTM_A549_MK2206_60min_R1 2 ALRPGDLPPSPDDVKR 16 2 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 ALRPGDLPPS(1)PDDVKR;ALRPGDLPPS(1)PDDVKR 76.301 9.5684e-05 11933100.0 2079.49 2376.31 2087.8599999999997 1839.12 2958.0 2413.77 1902.48 2397.0 3398.0 3306.0 3304.39 True False 2430.4570733507207 2497.2540289593458 2383.94994291553 2289.7044825612334 2522.882118438906 2669.1935392691503 2248.135989900002 2736.7820905046297 2628.3584254909774 2559.1723038832824 2483.818766475483 0.9785162694456642 1.005409115457698 0.9597922260239358 0.921848451048747 1.0157271345601653 1.0746329705273596 0.9051127321539999 1.1018445175805236 1.058192514271319 1.0303377760184675 1.0 11.278344194836501 -6.972193448110644 21.241723498468 1.0277910633930223 0.9687169485836632 0.2488365885241215 0.05058725764607257 46.73505363526719 35699.8410433362 0.007231081758579814 0.013664735414342391 1.0661211323303197e-07 6.972193448110644 -0.05907411480935909 ALRPGDLPPS(ph)PDDVKR ddPTM_A549_PD325901_60min_R1 2 ALRPGDLPPSPDDVKR 16 2 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 ALRPGDLPPS(1)PDDVKR;ALRPGDLPPS(1)PDDVKR 76.704 9.211e-05 17845500.0 4318.9 4918.7 5198.1 5123.3 6304.799999999999 6092.9 5637.0 5873.2 5579.2 5629.0 6133.1 True False 4757.351548593861 5333.216111179148 5550.874324714592 5439.754605141487 5861.972598379216 6043.2814424945545 5851.519119684763 5756.054418563733 5344.725626190627 5273.58397934885 5378.767580924152 0.8844686960384478 0.9915312440889709 1.0319974308614521 1.0113384754592534 1.0898356380314247 1.1235438883671247 1.0878921670527704 1.0701437331067496 0.9936710493209904 0.9804446650663368 1.0 12.393059935405393 -5.270746332616437 2.449361635970598 1.0252244835919841 0.8541221877650323 0.4684489025287719 0.04642155665265633 0.449026651594882 3.324147719134702 0.007634786167376029 0.15920409980963066 5.361097027918825e-06 5.270746332616437 -0.1711022958269518 ALS(ph)AESEVEEPAR ddPTM_A549_PD325901_60min_R1 1 ALSAESEVEEPAR 13 0 Q8N8E2;Q8N8E2-2;C9JT52 Q8N8E2 ZNF513 Zinc finger protein 513 1 ALS(0.988)AES(0.012)EVEEPAR 71.548 0.002188 2166700.0 690.58 795.03 872.5 1003.2 1114.9 998.13 1079.2 1051.2 964.85 1025.8 1128.0 True False 760.687173221874 862.029968258028 931.7130967687197 1065.1653855674926 1036.5932701961983 990.0015602089462 1120.2695465608995 1030.2329913495537 924.3007098562568 961.0308129358767 989.2631509811428 0.7689432002672201 0.871385907180586 0.9418253331731345 1.0767260303904687 1.0478438109901436 1.0007464234638388 1.1324282577894726 1.0414145016194907 0.9343324968078951 0.9714612456581796 1.0 9.950210528875068 -5.614612645106017 2.023690546113358 0.9988344832746625 0.7694877931498441 0.6610042929649096 0.05599696595559097 0.23171394417447347 1.5975672588912084 0.009302422779761187 0.07502971519252101 2.4287753968375136e-06 5.614612645106017 -0.22934669012481845 ALS(ph)AESEVEEPARGPGEAR ddPTM_A549_MK2206_60min_R1 1 ALSAESEVEEPARGPGEAR 19 1 Q8N8E2;Q8N8E2-2;C9JT52 Q8N8E2 ZNF513 Zinc finger protein 513 1 ALS(0.826)AES(0.174)EVEEPARGPGEAR 77.681 0.00010177 2775100.0 466.04 454.87 463.46 246.23 794.96 427.55 473.19 594.22 555.06 586.85 830.92 True False 544.6961584159433 478.0209400931435 529.1855969957909 306.55636105368444 678.0224370771441 472.79305721527925 559.1624979294298 678.4525047224286 429.33979624868226 454.28017741497405 624.5796317746416 0.8721004187540948 0.7653482690988892 0.8472668176709445 0.4908202980981854 1.0855660392745332 0.7569780267600379 0.8952621402985244 1.08625461063262 0.6874060158330539 0.7273374831712182 1.0 9.286741712036106 -6.777344189692167 24.999986295032688 0.8766150682173875 0.752801469740128 0.1665644864190794 0.15595026935516468 409.11821548340123 643072.355044653 0.023526970681377577 0.04456212469579143 1.6697667561250378e-07 6.777344189692167 -0.12381359847725959 ALS(ph)AESEVEEPARGPGEAR ddPTM_A549_PD325901_60min_R1 1 ALSAESEVEEPARGPGEAR 19 1 Q8N8E2;Q8N8E2-2;C9JT52 Q8N8E2 ZNF513 Zinc finger protein 513 1 ALS(0.818)AES(0.182)EVEEPARGPGEAR 72.99 0.00016742 2596000.0 511.51 594.31 510.42 500.5 482.04 463.02 453.73 418.63 400.19 659.09 530.71 True False 563.4381186462401 644.3945894311261 545.0601706048021 531.4147482820275 448.1831733477221 459.2493186337917 470.99694344058275 410.280096241118 383.3714059982124 617.4749449189968 465.4360344478742 1.2105597266756998 1.384496561800468 1.1710742836045827 1.1417567806334998 0.9629318320387067 0.9867076991118199 1.0119477405725692 0.8814962011435465 0.8236822627044523 1.326659087862588 1.0 8.862439099501161 -6.522635814459418 1.0354942972950845 0.9191360882445306 1.3081004074642084 0.32464354195060596 0.14043241012987023 0.20092917869036012 0.392518114617888 0.01284053346035644 0.052179708338572654 3.0016785760884837e-07 6.522635814459418 0.3889643192196778 ALS(ph)DREEEEEDDEEEEEEVEAAAQR ddPTM_A549_MK2206_60min_R1 3 ALSDREEEEEDDEEEEEEVEAAAQR 25 1 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 ALS(1)DREEEEEDDEEEEEEVEAAAQR;ALS(1)DREEEEEDDEEEEEEVEAAAQR;ALS(1)DREEEEEDDEEEEEEVEAAAQR 130.87 3.7855e-24 13356700.0 602.37 575.39 883.02 471.90599999999995 1199.33 958.8700000000001 1068.66 734.6099999999999 942.8699999999999 1030.1599999999999 1250.67 True False 704.0353294674524 604.6748933106023 1008.2455138722287 587.5229911846656 1022.9101457428435 1060.3369869536077 1262.8216890409021 838.7432171487712 729.3114504539965 797.4461405228077 940.094122263985 0.7488987674680454 0.6432067587598483 1.07249422158296 0.6249618812313826 1.0880933318457693 1.1279051340093984 1.3432928247649367 0.8921906831295412 0.7757855657023252 0.8482620214690367 1.0 9.876661396485877 -6.7669701700242335 24.9999031230153 0.9554225836807333 0.7845989933209352 0.24533541750300847 0.18517004373280124 211.87962165767345 957728.7354093569 0.02935408158747047 0.05660808807269493 1.710132773334413e-07 6.7669701700242335 -0.1708235903597981 ALS(ph)DVTDEEEVQVDPR ddPTM_A549_PD325901_60min_R1 2 ALSDVTDEEEVQVDPR 16 0 Q16659 Q16659 MAPK6 Mitogen-activated protein kinase 6 1 ALS(0.999)DVT(0.001)DEEEVQVDPR;ALS(1)DVTDEEEVQVDPR 173.36 4.186499999999999e-28 3179800.0 909.0799999999999 911.65 1239.03 1155.0700000000002 886.35 1099.88 1301.5 1274.44 917.3900000000001 956.97 1167.03 True False 1001.3691323706755 988.4779449359532 1323.1180266926608 1226.4160505456975 824.0958337415024 1090.9229419440524 1351.0292947081275 1249.0202944211608 878.8352886096612 896.5467508824778 1023.4927084126982 0.978384236780413 0.9657889468201016 1.292747877749556 1.1982655474387371 0.8051799753606119 1.065882475739304 1.3200184853328318 1.220350945497429 0.8586629698345565 0.8759678926026774 1.0 9.999285108983047 -8.769517878771524 24.988069906462673 0.9332575133328198 1.1062579621871507 0.24938417375523936 0.14881871233943045 210.28620729583798 650446.4695468245 0.02716713929540639 0.02917055586980954 1.7001299622837334e-09 8.769517878771524 0.17300044885433086 ALS(ph)GHSAADR ddPTM_A549_MK2206_60min_R1 2 ALSGHSAADR 10 0 A0A0U1RQE4 A0A0U1RQE4 1 ALS(0.873)GHS(0.127)AADR;ALS(0.816)GHS(0.184)AADR 130.69 3.6799e-07 36473000.0 3579.1000000000004 4233.1 3123.8 3344.3999999999996 3983.8 3740.6000000000004 3136.8999999999996 3158.6000000000004 4291.7 4125.0 4606.9 True False 4183.16457940628 4448.546708968025 3566.801812228569 4163.778150135823 3397.7882973079477 4136.427809190677 3706.8341253087106 3606.341222806812 3319.636802436618 3193.1596350630807 3462.879586028251 1.208001744064153 1.2846380009621658 1.0300103493692403 1.2024033890567554 0.9812031325077174 1.1945052394775737 1.0704484615245495 1.0414284219865422 0.958634777781596 0.9221110800232803 1.0 11.757756506543103 -6.052125782590148 0.3226589669786341 0.9722321768776363 1.3455315736058164 0.5311274886540128 0.07895113492731738 2.3655685673535825 0.24832219135298667 0.028372010405063396 0.321465766789119 8.868991065790797e-07 6.052125782590148 0.37329939672818013 ALS(ph)GHSAADR ddPTM_A549_PD325901_60min_R1 2 ALSGHSAADR 10 0 A0A0U1RQE4 A0A0U1RQE4 1 ALS(0.987)GHS(0.013)AADR;ALS(0.999)GHS(0.001)AADR 96.82 0.00016242 47095000.0 5698.4 5528.1 5757.5 5982.7 6429.6 5150.5 3844.5 4706.0 6001.4 6472.6 6100.5 True False 6276.89737305964 5993.97238786864 6148.238572660064 6352.237791302469 5978.007076915847 5108.556035642835 3990.804551291123 4612.135138214421 5749.182028430677 6063.918931379171 5350.177174255727 1.1732129925085764 1.1203315689638769 1.1491654149781232 1.1872948473311338 1.117347497514876 0.9548386659463284 0.7459200735434134 0.8620527859165755 1.0745778768028287 1.1334052562890564 1.0 12.385370952659564 -7.13674065862668 4.766387756394096 0.9927071722048619 1.153804384546789 0.4561914792976042 0.09947531609442242 0.20998650301703595 7.311841479427836 0.01601554765478737 0.028220792909996274 7.298932399636038e-08 7.13674065862668 0.16109721234192698 ALS(ph)GHSAADRNER ddPTM_A549_MK2206_60min_R1 3 ALSGHSAADRNER 13 1 A0A0U1RQE4 A0A0U1RQE4 1 ALS(0.785)GHS(0.215)AADRNER;ALS(0.994)GHS(0.006)AADRNER;ALS(0.999)GHS(0.001)AADRNER 85.57600000000001 8.0655e-05 155924000.0 4254.5 5360.599999999999 4508.3 3817.7700000000004 4349.1 3934.9999999999995 4070.2 4129.299999999999 5223.6 6342.599999999999 7415.6 True False 4972.555587461652 5633.4316430261515 5147.644730799043 4753.123821386211 3709.353151217934 4351.3990881584 4809.702654477833 4714.640920450882 4040.462940375126 4909.802254872987 5574.101859851766 0.8920819375901913 1.0106438283092236 0.9234931223405982 0.8527156375848166 0.6654620321768893 0.7806457789191027 0.8628659424256985 0.8458117628615168 0.7248634922653845 0.8808239207533167 1.0 12.444523650821123 -6.190770478417747 4.048646095264252 0.8432348422700053 0.9533155890425077 0.24639330344162047 0.08697445875636749 0.35958555860641545 11.479834440896887 0.01640978799353418 0.04563011989686352 6.445097944215918e-07 6.190770478417747 0.11008074677250235 ALS(ph)GHSAADRNER ddPTM_A549_PD325901_60min_R1 3 ALSGHSAADRNER 13 1 A0A0U1RQE4 A0A0U1RQE4 1 ALS(0.976)GHS(0.024)AADRNER;ALS(0.993)GHS(0.007)AADRNER;ALS(0.877)GHS(0.123)AADRNER 171.15 3.0093e-22 161756000.0 9091.369999999999 10175.800000000001 9856.1 10600.1 11287.9 11226.9 10511.84 10985.3 10909.380000000001 12047.2 12705.5 True False 10014.319189687138 11033.350377973202 10524.994215544037 11254.844102426221 10495.076845140966 11135.471848666826 10911.873823499558 10766.18957369887 10450.896696990872 11286.53773601199 11142.804046800451 0.8987252353740038 0.9901771880428358 0.944555263768296 1.0100549246989532 0.941870358758981 0.9993419790832874 0.9792753940273048 0.9662011041816964 0.9379054547756986 1.0128992387022018 1.0 13.44382470696415 -5.252534980573279 24.437103526609242 0.9721566539167359 0.8987251831340209 0.405812281299608 0.026754196548550834 682.3262396023653 1872510.5699360918 0.0036107896869760404 0.05909023909853681 5.590684951676691e-06 5.252534980573279 -0.07343147078271495 ALS(ph)GVLEQDRVQSLKDKNEATVSTGK ddPTM_A549_MK2206_60min_R1 1 ALSGVLEQDRVQSLKDKNEATVSTGK 26 3 E9PJ90;E9PN23;G5E991;E9PMN1;E9PLR4;Q9Y450-2;Q9Y450-4;Q9Y450 E9PJ90 HBS1L HBS1-like protein 1 ALS(0.528)GVLEQDRVQS(0.471)LKDKNEAT(0.001)VSTGK 48.449 0.0018376999999999998 4395500.0 1328.2 1520.3 1018.3 1087.0 2064.0 1640.4 1309.7 1374.4 2592.6 2256.9 2181.1 True False 1552.367688627704 1597.6767762736745 1162.7102520623441 1353.3150487972837 1760.3883341642668 1813.986039190607 1547.655536968605 1569.2254089234723 2005.3802395314626 1747.0647225148757 1639.4726747023417 0.9468701202412829 0.9745064989044385 0.7091977011897699 0.8254575203841004 1.0737527751012246 1.1064448143485828 0.9439959328688374 0.9571525241848735 1.2231861320259907 1.0656260085774643 1.0 10.679016141013404 -6.768624699704671 24.21015847506997 1.0820958281813735 0.8608428271236686 0.4424817523923087 0.09854894571071482 78.59950093283612 264834.20683631784 0.017098788293585094 0.03281786924217672 1.7036300829116244e-07 6.768624699704671 -0.22125300105770496 ALS(ph)IESLSPTDSSNGVNWR ddPTM_A549_MK2206_60min_R1 1 ALSIESLSPTDSSNGVNWR 19 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 ALS(0.953)IES(0.047)LSPTDSSNGVNWR 94.544 2.9957999999999998e-06 2469000.0 670.03 744.93 956.13 898.13 1161.1 967.97 968.05 823.98 1289.4 1189.2 1538.8 True False 783.1146833392721 782.8437551467127 1091.7236112190603 1118.1718903185874 990.3037280998692 1070.3999429135167 1143.9321543578365 940.7816883329185 997.3529587486951 920.5588940647307 1156.6734912805293 0.6770404001152495 0.6768061696305001 0.9438476972532981 0.9667135096877533 0.8561653185321334 0.9254123579234959 0.9889844999312751 0.813351127543693 0.8622597182931427 0.7958675468957095 1.0 10.175765958969997 -5.758947023310416 24.982496598883223 0.9259120938844637 0.6769231749197464 0.6218102134147798 0.06738739179526129 25.52959974420314 255882.82439138353 0.008972320057443608 0.031799861133419705 1.7420193577637103e-06 5.758947023310416 -0.2489889189647173 ALS(ph)KPGTAAELR ddPTM_A549_MK2206_60min_R1 2 ALSKPGTAAELR 12 1 A0A0A0MT38;Q9BZ29-3;Q9BZ29;Q9BZ29-4;A0A0D9SF41 A0A0A0MT38 DOCK9 Dedicator of cytokinesis protein 9 1 ALS(0.903)KPGT(0.097)AAELR;ALS(0.994)KPGT(0.006)AAELR 78.244 0.00027998 26284000.0 6770.6 9160.3 7784.6 7077.4 9458.099999999999 7686.5 6363.1 7473.6 10761.400000000001 10722.900000000001 10403.900000000001 True False 7913.311754722739 9626.520143195246 8888.573336152922 8811.363317716561 8066.826019069309 8499.880328114243 7519.192904699492 8533.005686940089 8323.960082424546 8300.589442622517 7820.32449696745 1.0118904602732723 1.2309617263232746 1.136599042610024 1.1267260484054613 1.0315206257997922 1.086896116831253 0.9614937215987994 1.0911319204527896 1.0644008551886044 1.0614124063318988 1.0 12.933012756702754 -6.736586487731691 5.335858719393824 1.03472576434486 1.1358223880744416 0.30987773360715365 0.059183947615161527 0.13817714889411978 10.626443027538562 0.008003125599950554 0.016478142119712023 1.8340598862274802e-07 6.736586487731691 0.10109662372958161 ALS(ph)KPGTAAELR ddPTM_A549_PD325901_60min_R1 4 ALSKPGTAAELR 12 1 A0A0A0MT38;Q9BZ29-3;Q9BZ29;Q9BZ29-4;A0A0D9SF41 A0A0A0MT38 DOCK9 Dedicator of cytokinesis protein 9 1 ALS(0.949)KPGT(0.051)AAELR;ALS(0.961)KPGT(0.039)AAELR;ALS(0.988)KPGT(0.012)AAELR;ALS(0.995)KPGT(0.005)AAELR 110.84 2.1127e-05 47254900.0 12388.599999999999 15819.2 14757.400000000001 13635.199999999999 17218.5 15826.8 15274.499999999998 15014.2 13352.400000000001 15415.699999999999 13493.0 True False 13646.2815519947 17152.339501487237 15758.925907455252 14477.415336213993 16009.131960600267 15697.91178815881 15855.77945602711 14714.730002587963 12791.24506222177 14442.350071140187 11833.446539174254 1.1531958594496634 1.449479612275676 1.3317274773064485 1.2234318453450534 1.3528714485338262 1.3265714038755627 1.3399122059272461 1.2434864140278414 1.080939945930102 1.2204686118561687 1.0 13.530582705196943 -8.749661117930433 1.9466818032214568 1.0307035820467263 1.3170122026659339 0.46137440389736584 0.09203952375779338 0.10553566890282343 0.7838052269005394 0.012944692562662539 0.014016902004591958 1.7796675515175798e-09 8.749661117930433 0.2863086206192076 ALS(ph)LAR ddPTM_A549_MK2206_60min_R1 1 ALSLAR 6 0 P35749-3;P35749-2;P35749;P35749-4;P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35749-3;P35579;P35580-2;P35580-5 MYH11;MYH9;MYH10 Myosin-11;Myosin-9;Myosin-10 1 ALS(1)LAR 77.058 0.044842 3094400.0 807.22 802.2 902.71 916.51 1187.8 1140.2 530.44 848.37 1225.8 1206.1 1329.9 True False 943.4590013658003 843.0285535267647 1030.72785194854 1141.0549911436967 1013.0761934691458 1260.8552071964955 626.8140818734269 968.6290455241603 948.1582572003649 933.6411723271708 999.649126627227 0.9437901521996925 0.843324453622149 1.031089633845999 1.1414554974839692 1.013431779695763 1.261297762996669 0.627034091439934 0.9689690309561645 0.9484910574567398 0.9339688771371569 1.0 9.965277992559804 ALS(ph)LAR ddPTM_A549_PD325901_60min_R1 2 ALSLAR 6 0 P35749-3;P35749-2;P35749;P35749-4;P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35749-3;P35579;P35580-2;P35580-5 MYH11;MYH9;MYH10 Myosin-11;Myosin-9;Myosin-10 1 ALS(1)LAR;ALS(1)LAR 91.626 0.03706 12931000.0 2910.3 2640.0 3063.3 2565.13 3323.5 3009.4 2958.6000000000004 3112.3 2817.9 2973.6 3445.3 True False 3205.7515135503763 2862.482065080806 3271.1939591193336 2723.572254267088 3090.068825452566 2984.892444163389 3071.1911420080423 3050.2227349478826 2699.473462511216 2785.846388522248 3021.549941556145 1.060962610434089 0.9473555362141668 1.082621178663894 0.9013825046573303 1.0226767338689537 0.9878679822932608 1.0164290517820571 1.0094894322272796 0.8934068655906264 0.9219925013344291 1.0 11.561073072418665 -8.703596205391824 24.999987688112263 0.9496639796078554 1.0014896744515087 0.22502759107946235 0.05261976684046209 109.45684405388367 47307.18252989912 0.009306187797842458 0.010552223119467187 1.9788086248169496e-09 8.703596205391824 0.05182569484365329 ALS(ph)LDDK ddPTM_A549_PD325901_60min_R1 1 ALSLDDK 7 0 Q9NRR6-2;Q9NRR6 Q9NRR6-2 INPP5E 72 kDa inositol polyphosphate 5-phosphatase 1 ALS(1)LDDK 56.431999999999995 0.03762 1067400.0 810.98 816.84 801.7 773.85 980.44 878.03 810.18 781.95 936.02 845.9 966.58 True False 893.3100925880785 885.6779735002294 856.1081830137335 821.6489569591357 911.5772767343805 870.8796147899188 841.0118432475075 766.3533938220921 896.6823344972311 792.4897296378028 847.6967876554545 1.053808514550091 1.0448051548594666 1.0099226462583906 0.9692722314444987 1.0753577104563596 1.0273480181499601 0.992113991104725 0.904041875564563 1.0577866373391127 0.934874050696426 1.0 9.72740450978621 -7.556281993649247 24.750733583509845 1.0141767582536736 1.0293102529281195 0.029070325731520907 0.05040675279708571 696.7702423836531 516282.72544236766 0.007464361150168531 0.011071486734784563 2.777908945830981e-08 7.556281993649247 0.015133494674445913 ALS(ph)LDDKGWR ddPTM_A549_MK2206_60min_R1 1 ALSLDDKGWR 10 1 Q9NRR6-2;Q9NRR6 Q9NRR6-2 INPP5E 72 kDa inositol polyphosphate 5-phosphatase 1 ALS(1)LDDKGWR 54.7 0.0052032 2301000.0 955.3 623.18 483.25 486.62 1039.7 790.88 658.27 857.75 927.78 1076.3 1303.5 True False 1116.531285157391 654.8972001830084 551.7821165757905 605.8419218452023 886.7615072822621 874.5703966563443 777.869138215105 979.3386892492061 717.6393113602174 833.1630824771862 979.8049752301607 1.1395444128002234 0.6683954631166983 0.563155046693016 0.6183290931982532 0.9050387880240736 0.8925964031269628 0.7939020089506893 0.9995241032728528 0.7324307688799403 0.8503356316204379 1.0 9.936350807096302 -6.783248480139272 24.967294505354076 0.8777492482774205 0.728558719505044 0.14099206831356492 0.15715559455943454 335.1295117247682 383659.15031493525 0.023963582493675094 0.045313855540318033 1.6472196706235168e-07 6.783248480139272 -0.14919052877237649 ALS(ph)NSNRDKEIK ddPTM_A549_PD325901_60min_R1 2 ALSNSNRDKEIK 12 2 Q9Y5S2 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta 1 ALS(0.5)NS(0.5)NRDKEIK;ALS(0.598)NS(0.402)NRDKEIK 46.408 0.012501 11637800.0 2655.2 3459.5 3206.1 3048.5 4596.3 3917.5 3800.5 3706.0 3535.8 4025.1 4124.299999999999 True False 2924.7539493450695 3751.044206116306 3423.6852258454915 3236.7989213541687 4273.471744374191 3885.5971788429833 3945.1301072133965 3632.0809226992433 3387.2026220757143 3770.9544990721342 3617.0372460917765 0.8086048747508138 1.037048819491512 0.9465440892390028 0.8948757508238387 1.1814840306086687 1.0742485947694862 1.0907076258272224 1.0041591157579928 0.9364577668464986 1.042553405593671 1.0 11.82059273874514 -5.253340775993693 23.97474657027185 0.9958666108653436 0.8086047087824881 0.33242822657071924 0.07960992554932851 551.7854135892206 1633411.6483742357 0.011317495439533618 0.16785139216545245 5.580321541978056e-06 5.253340775993693 -0.18726190208285542 ALS(ph)PAELR ddPTM_A549_MK2206_60min_R1 2 ALSPAELR 8 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 ALS(1)PAELR;ALS(1)PAELR 91.087 0.0026190000000000002 80028000.0 1285.92 1401.88 1392.13 1241.6 1646.7 1381.17 1208.6 1481.59 2248.57 1711.7 1915.67 True False 1502.9518582744595 1473.2297040863891 1589.554967301925 1545.792055737542 1404.4726113702989 1527.324492653554 1428.1869756282022 1691.6099196790801 1739.2724852284437 1325.0257811727208 1439.9562691976685 1.0437482654330132 1.0231072537412962 1.103891139824414 1.073499306057985 0.9753578226044735 1.0606742199918102 0.9918266312517782 1.1747647868651114 1.2078647959201925 0.9201847372149808 1.0 10.491809283017412 -8.250841112827798 24.82706298448637 1.106646518175388 1.0404939900296626 0.0 0.08172383177017675 1095.625325723795 2566568.502368478 0.013480670944990177 0.01729341158997594 5.61253273678845e-09 8.250841112827798 -0.06615252814572536 ALS(ph)PAELR ddPTM_A549_PD325901_60min_R1 2 ALSPAELR 8 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 ALS(1)PAELR;ALS(1)PAELR 122.96 0.0011485999999999998 120950000.0 2793.1000000000004 1980.1 2242.0 2562.6 2853.0 2063.3900000000003 2286.3 2520.7 2386.1 2255.6 2438.0 True False 3076.653455828455 2146.969976161554 2394.155602241224 2720.8859819131344 2652.615122315682 2046.5864359547743 2373.3063976113635 2470.4226610491037 2285.820514886266 2113.181031056897 2138.141455755343 1.4389382178372119 1.004129062828115 1.1197367675542491 1.2725472276818677 1.2406172263184478 0.9571800922927127 1.109985679957243 1.1554065585321038 1.069068890991009 0.9883261116184532 1.0 11.062141587096487 -2.000000001917358 0.12008316711984986 0.951995389618465 1.888919230668534 0.3419395368659419 0.11342321835933597 75.49153309415347 0.6006101195462857 0.3911927816555717 11.909455008948788 0.009999999955851204 2.000000001917358 0.9369238410500691 ALS(ph)PEGALR ddPTM_A549_MK2206_60min_R1 2 ALSPEGALR 9 0 K7EPS7;I3L2Z9;I3L100;I3L2W2;Q96JN8-2;Q96JN8 K7EPS7 NEURL4 Neuralized-like protein 4 1 ALS(1)PEGALR;ALS(1)PEGALR 83.309 0.0014435000000000001 17350500.0 1383.3600000000001 1584.3000000000002 1594.24 1133.44 1773.33 1510.08 1290.4 1374.03 1929.73 1809.04 1969.27 True False 1616.837348095183 1664.9341029075715 1820.327204407218 1411.1328508820545 1512.475506116047 1669.875663290022 1524.848976791852 1568.8029602903953 1492.649236145587 1400.3766075671545 1480.2459099129253 1.0922761801046237 1.1247685886228933 1.2297464848352784 0.9533097449768084 1.0217731364682625 1.1281069260905787 1.0301322007243718 1.0598259044557532 1.0083792335784203 0.9460432203791942 1.0 10.53162115209836 -6.195541379204991 0.2924432497960715 0.9949343513995105 1.1937601013545363 0.34014423720551834 0.0653921847462456 4.0761970597950254 0.38143333073550706 0.02999507839437563 0.2721768857341777 6.374683407056646e-07 6.195541379204991 0.19882574995502578 ALS(ph)PEGALR ddPTM_A549_PD325901_60min_R1 1 ALSPEGALR 9 0 K7EPS7;I3L2Z9;I3L100;I3L2W2;Q96JN8-2;Q96JN8 K7EPS7 NEURL4 Neuralized-like protein 4 1 ALS(1)PEGALR 54.093999999999994 0.020484 10999000.0 1913.2 1349.0 1500.0 1507.1 1712.1 1610.1 1863.5 1431.3 1375.4 1812.7 1776.4 True False 2107.4266555765994 1462.6849643159126 1601.7990202327555 1600.1901441275606 1591.848002424352 1596.987879426954 1934.4165122463273 1402.7515986668714 1317.5967210823392 1698.2458126426832 1557.9140615273961 1.3527233033062525 0.9388739728569367 1.0281690497499805 1.027136338033124 1.0217816513342761 1.0250808557830522 1.2416708726216927 0.9004037085919863 0.8457441611320671 1.0900766958722385 1.0 10.605399937556026 -8.324723725221446 24.999985345161495 0.923115091809496 1.0748988160503392 0.17663109593525883 0.12561120444139878 210.96327858899252 83338.78460792731 0.01893419401018808 0.0228903255072092 4.734523480887825e-09 8.324723725221446 0.1517837242408432 ALS(ph)PEGALRR ddPTM_A549_MK2206_60min_R1 2 ALSPEGALRR 10 1 K7EPS7;I3L2Z9;I3L100;I3L2W2;Q96JN8-2;Q96JN8 K7EPS7 NEURL4 Neuralized-like protein 4 1 ALS(1)PEGALRR;ALS(1)PEGALRR 61.435 0.0031458000000000002 13218100.0 716.9300000000001 932.3 855.98 844.8399999999999 1030.98 524.49 554.19 669.01 1051.6499999999999 1185.12 1280.58 True False 837.9302567443609 979.7500878247355 977.3708352747958 1051.8258379263086 879.3242077309477 579.991183671715 654.8791494484469 763.8442162571971 813.4529541399611 917.4005688984133 962.5766437899804 0.870507571682972 1.0178411185701925 1.0153693646944995 1.092719052256374 0.9135108496594718 0.6025402625479247 0.6803397461109929 0.7935411909120208 0.8450786328422947 0.9530675555208841 1.0 9.91075760757453 -6.987980829751854 24.43262712761074 0.8686122231561534 1.0017970305080728 0.2863297989656711 0.12164445647915656 258.8422357587692 526170.704806327 0.021063127900059195 0.039783621860346605 1.0280616769266021e-07 6.987980829751854 0.1331848073519194 ALS(ph)PEGALRR ddPTM_A549_PD325901_60min_R1 2 ALSPEGALRR 10 1 K7EPS7;I3L2Z9;I3L100;I3L2W2;Q96JN8-2;Q96JN8 K7EPS7 NEURL4 Neuralized-like protein 4 1 ALS(1)PEGALRR;ALS(1)PEGALRR 117.86 2.9415e-05 45017000.0 2739.0 2702.7 3117.8 2556.9 2608.5 3205.5 3232.0 3018.2 2997.8999999999996 2861.8 3313.5 True False 3017.0612636547703 2930.466014126474 3329.3926568544566 2714.8339058587753 2425.2879588364717 3179.3954707801377 3354.9955286182635 2957.999633267904 2871.9086884780754 2681.105459602156 2905.960506007107 1.0382320260093003 1.0084328427962836 1.1457115986167206 0.9342294570923311 0.8345908190503606 1.0940945220032394 1.1545220665191167 1.0179077200647508 0.9882820783494336 0.9226228140609144 1.0 11.504799380552706 -9.010779290561 0.0051388859899935595 0.11353290858703209 1.904159203288993 0.04125436541729022 0.0894880657308003 17966.48667954501 63.08956573952175 11041.726597812978 10938.287445938473 9.754852555851661e-10 9.010779290561 1.7906262947019609 ALS(ph)PGLEESGLGLLAR ddPTM_A549_PD325901_60min_R1 2 ALSPGLEESGLGLLAR 16 0 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR 272.96 5.7170999999999985e-92 49815000.0 10953.7 11708.3 10608.599999999999 12742.3 13085.099999999999 12740.1 11447.2 12643.4 12717.2 11795.9 13526.900000000001 True False 12065.711560312257 12694.999531282421 11328.563390694144 13529.362931137022 12166.047717144378 12636.348849566693 11882.82946014819 12391.217468444576 12182.740309254266 11051.10486089911 11863.177054084053 1.0170725350641612 1.0701180192629767 0.9549350346072882 1.14045022420696 1.02553031634608 1.065174092231597 1.0016565887851578 1.04451087697277 1.0269374092381265 0.931546820090207 1.0 13.534202806496195 -9.661984817385882 0.5046669141571483 0.9997155620875252 1.0432656629697445 0.19017982563352787 0.048716885214081206 1.4328665672923158 0.790347297099496 0.026176934270496055 0.011777214828697992 2.177785904808103e-10 9.661984817385882 0.043550100882219334 ALS(ph)PLPTR ddPTM_A549_MK2206_60min_R1 1 ALSPLPTR 8 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ALS(0.996)PLPT(0.004)R 72.643 0.0063721 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALS(ph)PVIPLIPR ddPTM_A549_MK2206_60min_R1 4 ALSPVIPLIPR 11 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ALS(1)PVIPLIPR;ALS(1)PVIPLIPR;ALS(1)PVIPLIPR;ALS(1)PVIPLIPR 163.46 1.2789e-13 197818000.0 25414.199999999997 26798.199999999997 26337.8 23828.0 37301.6 26566.6 27790.3 26477.300000000003 39314.4 39070.4 39434.6 True False 29703.495642465132 28162.113915633203 30072.896078530495 29665.86106967957 31814.584053130708 29377.859978518158 32839.43778653022 30230.538358330534 30409.751172196164 30244.36950442872 29641.900480407603 1.0020779761438792 0.9500778782469601 1.0145400797903552 1.00080833512304 1.0732977149747596 0.9910923220977694 1.1078722097537603 1.0198583042376788 1.0259042328374353 1.0203249121769142 1.0 14.855350328062368 -6.533567526559639 24.707936427756312 1.0228808649444443 0.9887928270747766 0.21583739365125 0.035242672853665384 254.4225429612139 588116.2557057661 0.005015717632182398 0.010448764235574304 2.927065719270748e-07 6.533567526559639 -0.03408803786966774 ALS(ph)PVIPLIPR ddPTM_A549_PD325901_60min_R1 2 ALSPVIPLIPR 11 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ALS(1)PVIPLIPR;ALS(1)PVIPLIPR 173.04 3.4378999999999997e-15 298253000.0 31588.2 29581.6 32113.0 33525.1 38549.8 32680.4 32660.0 34932.6 34003.4 36104.8 39040.0 True False 34795.01080999621 32074.545248634244 34292.381291156344 35595.86928597366 35842.1950375903 32414.26165755207 33902.89417223775 34235.84188890544 32574.35534800873 33825.1367663163 34238.32749495018 1.0162590685870427 0.936802338062948 1.0015787510711245 1.0396497694352538 1.0468442140719836 0.9467244468157172 0.9902029874922511 0.9999274028193956 0.9514003086982894 0.9879319242829596 1.0 15.063324608926523 -7.274869590365244 24.97629846319546 0.9776229274062388 1.0056351848966385 0.17280358570133447 0.031082818984127774 1227.8611560721583 2283461.985541106 0.005084400845154028 0.008155105466692186 5.3104388176687805e-08 7.274869590365244 0.028012257490399706 ALS(ph)PVTSR ddPTM_A549_MK2206_60min_R1 2 ALSPVTSR 8 0 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 ALS(0.999)PVT(0.001)SR;ALS(0.992)PVT(0.008)SR 133.13 0.0010649000000000001 278150000.0 10790.8 12611.2 11579.099999999999 10298.099999999999 15287.400000000001 11617.900000000001 11343.8 10817.7 17526.199999999997 16959.800000000003 16459.5 True False 12612.023230269417 13253.0562132096 13221.190493621805 12821.134962299271 13038.643711096329 12847.298466662134 13404.821623474432 12351.14210281683 13556.543683590337 13128.569400907349 12372.151890909723 1.0193880047282589 1.0712005744891566 1.068624974070671 1.0362898124229651 1.0538703231307969 1.0384045216985671 1.0834672692083136 0.9983018485160751 1.0957304600787217 1.0611387183625989 1.0 13.5948088299319 -11.113006431191344 1.4641480671929639 1.0000428346853532 1.0572991346031797 0.0 0.032511498997915764 0.35687552444657905 1.3701576687412769 0.019744822638353286 0.004293947703253336 7.708920533287584e-12 11.113006431191344 0.05725629991782655 ALS(ph)PVTSR ddPTM_A549_PD325901_60min_R1 1 ALSPVTSR 8 0 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 ALS(0.989)PVT(0.01)SR 121.64 0.0011763 182880000.0 7204.8 7648.9 8170.4 7734.8 8162.1 6989.4 8440.1 8137.8 7799.5 7794.5 8253.9 True False 7936.225992106567 8293.499646816881 8724.892476606476 8212.56102899466 7588.822253716381 6932.480643728184 8761.292624099935 7975.4851950194 7471.714138491862 7302.353939782304 7238.722625783028 1.0963572445557117 1.1457131424371652 1.2053083019827253 1.134531802578399 1.048364835349038 0.9576939195094912 1.2103368338626193 1.1017807432781241 1.0321868269795227 1.0087904064416882 1.0 12.821519420639351 -8.14964764253423 0.2617723111993504 0.9813514347455787 1.1687203545782423 0.29869154087615113 0.06685302176407498 1.6526219389488483 0.3464364515559831 0.07353333388491586 0.11104376224322543 7.085203972649521e-09 8.14964764253423 0.18736891983266357 ALS(ph)QAAVEEEEEEEEEEEPAQGK ddPTM_A549_MK2206_60min_R1 1 ALSQAAVEEEEEEEEEEEPAQGK 23 0 Q5JTH9-2;Q5JTH9-3;Q5JTH9 Q5JTH9-2 RRP12 RRP12-like protein 1 ALS(1)QAAVEEEEEEEEEEEPAQGK 51.321000000000005 0.0027143000000000002 1387300.0 154.15 139.36 346.15 264.36 280.29 277.55 286.84 360.77 442.41 409.65 437.19 True False 180.16675139433872 146.4528287453129 395.23927501854087 329.12821186757157 239.05971229791788 306.9201567772207 338.95511508290025 411.91025231178776 342.20484138359717 317.1097804857189 328.62365716983055 0.5482464438073906 0.4456551606983883 1.2027109625107841 1.0015353571988284 0.7274574032701894 0.933956366442013 1.0314385701931692 1.2534406556704931 1.0413274696372452 0.9649633359227046 1.0 8.360292531453696 -5.752435127312348 24.999986827159077 1.019055681140198 0.496950542673269 0.6994720883223378 0.13157962200680795 76.14512785225382 211409.4233260216 0.017968965438691028 0.06761320175839004 1.7683363430422668e-06 5.752435127312348 -0.5221051384669291 ALS(ph)QAAVEEEEEEEEEEEPAQGK ddPTM_A549_PD325901_60min_R1 1 ALSQAAVEEEEEEEEEEEPAQGK 23 0 Q5JTH9-2;Q5JTH9-3;Q5JTH9 Q5JTH9-2 RRP12 RRP12-like protein 1 ALS(1)QAAVEEEEEEEEEEEPAQGK 46.847 0.003969100000000001 1117200.0 283.12 311.15 263.73 184.71 160.82 476.85 378.71 298.85 262.84 249.95 374.17 True False 311.8621339780719 337.37170248101984 281.628303737323 196.1191171931536 149.52455799888116 472.9666916991139 393.12201628806355 292.88920230671033 251.79374885072133 234.16811434326618 328.14946205905505 0.9503661289621372 1.028103780405726 0.8582318007476729 0.5976518015984413 0.4556599211245153 1.441314846994925 1.1979968329715434 0.8925481714000215 0.7673142209978926 0.7136020058479461 1.0 8.358209257843447 ALS(ph)SDS(ph)ILSPAPDAR ddPTM_A549_PD325901_60min_R1 2 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 2 ALS(0.935)S(0.067)DS(0.967)ILS(0.031)PAPDAR;ALS(0.992)S(0.011)DS(0.499)ILS(0.499)PAPDAR 125.67 1.0074e-09 4705300.0 2948.7 3004.7 2911.0 2914.1 3505.7 3237.5 2970.9 3023.3 2951.3 2953.5 3616.5 True False 3248.04985328179 3257.9166139955655 3108.5579652650335 3094.0973385987154 3259.4717260084412 3211.134873389703 3083.95922523886 2962.997909767031 2827.267124422211 2767.015505952538 3171.6934268823616 1.024074340146577 1.027185221113239 0.9800940844149028 0.9755348081167101 1.027675530800706 1.0124354536201536 0.9723383726497992 0.9342006023197301 0.8914061808304383 0.8724095092230889 1.0 11.631037612799958 -7.955002859882851 3.7200439879225766 0.9463311621350359 1.0067206314046038 0.5052491600009792 0.03620154691911814 0.21539988620362224 6.287875250585111 0.006734571998244935 0.009324597225959118 1.1091675112331759e-08 7.955002859882851 0.0603894692695679 ALS(ph)SDSILS(ph)PAPDAR ddPTM_A549_PD325901_60min_R1 2 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 2 ALS(0.674)S(0.153)DS(0.233)ILS(0.94)PAPDAR;ALS(0.964)S(0.028)DS(0.05)ILS(0.959)PAPDAR 71.692 0.0016172 1694010.0 686.51 611.29 602.24 892.27 1126.91 846.55 858.94 1104.1 769.8499999999999 935.3 838.65 True False 756.2039898180496 662.8055536224418 643.1116279633169 947.383491407802 1047.7597292284486 839.6559774727576 891.6274317300027 1082.0778593503055 737.4958817254903 876.2449983807034 735.501366640368 1.028147633868102 0.9011615527650384 0.8743853609693887 1.2880784922742858 1.4245517095561875 1.1416103566308087 1.2122716179342932 1.4712112151375514 1.0027117761782454 1.1913574034311123 1.0 9.52258421193933 -3.7242257522328353 15.792791127463559 1.07921082489226 1.0906868528807503 0.0 0.19979875989758777 0.0 0.0 0.02792190601914251 0.0 0.00018870102003077914 3.7242257522328353 0.011476027988490234 ALS(ph)SDSILSPAPDAR ddPTM_A549_MK2206_60min_R1 2 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.929)S(0.063)DS(0.007)ILSPAPDAR;ALS(0.858)S(0.141)DS(0.001)ILSPAPDAR 225.32 4.368500000000001e-54 214648200.0 4555.0 4659.0 4884.6 4893.64 7248.0 5448.8 4441.4 5856.6 8048.1 8319.9 8121.6 True False 5323.772640942023 4896.123199802043 5577.309729179735 6092.582019683847 6181.82880136754 6025.388399379291 5248.344889587206 6686.7909850852775 6225.218200174796 6440.428811578503 6104.782575243019 0.8720658885595274 0.8020143452213183 0.9135967842323547 0.9980014758250934 1.0126206339332984 0.9869947578173056 0.8597103705005056 1.0953364681983109 1.019728077691118 1.054980866590834 1.0 12.57572419851449 -6.066486658883883 2.8980163803700734 1.0031233122661016 0.8375036203718269 0.5698557592681348 0.056651834138868325 0.12924935259553472 2.1135850555782714 0.007356552597753816 0.024084900678301765 8.580514728482216e-07 6.066486658883883 -0.16561969189427472 ALS(ph)SDSILSPAPDAR ddPTM_A549_PD325901_60min_R1 5 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.813)S(0.176)DS(0.01)ILS(0.001)PAPDAR;ALS(0.498)S(0.498)DS(0.004)ILSPAPDAR;ALS(0.49)S(0.49)DS(0.019)ILSPAPDAR;ALS(0.808)S(0.173)DS(0.019)ILSPAPDAR;ALS(0.95)S(0.035)DS(0.014)ILSPAPDAR 403.52 0.0 967734400.0 26383.04 29181.140000000003 27581.21 26016.86 32340.7 30890.280000000002 26034.07 29886.04 33052.939999999995 35054.2 36791.57 True False 29061.426798632478 31640.33707901974 29453.036769889248 27623.86235362389 30069.200801358147 30638.719801319694 27024.810780239728 29289.939487055177 31663.839876495058 32840.871829612784 32266.440130978102 0.9006703770439001 0.9805958435632551 0.912807134915767 0.8561174471522501 0.9319032616954094 0.9495537678451339 0.837551668871397 0.9077524315716108 0.9813242411608802 1.017802760276712 1.0 14.977746797514266 -8.801493216786902 4.857257507429766 0.9917561417549267 0.9098447099440047 0.522779051722464 0.038209558039003146 0.12018493332022287 6.37307695782571 0.006598193770296888 0.007080701504957622 1.5794532769087478e-09 8.801493216786902 -0.08191143181092198 ALS(ph)TTSSSTTNGNR ddPTM_A549_MK2206_60min_R1 1 ALSTTSSSTTNGNR 14 0 Q9BSQ5-3;Q9BSQ5;C9JUH3;A0A0A0MT72;Q9BSQ5-4;Q9BSQ5-2 Q9BSQ5-3 CCM2 Cerebral cavernous malformations 2 protein 1 ALS(0.473)T(0.473)T(0.038)S(0.013)S(0.003)S(0.001)TTNGNR 101.97 2.8408000000000003e-05 4266900.0 836.77 1186.4 766.84 1056.7 1446.3 878.71 968.48 811.37 1349.3 1374.7 1587.6 True False 977.9963189376632 1246.7826924758845 875.5894428866617 1315.591547437065 1233.5511859020255 971.6945089595088 1144.4402797918258 926.3841822164125 1043.6857043893403 1064.154315229385 1193.3551044690466 0.8195350363652218 1.0447709049944602 0.7337207840379023 1.1024309046906908 1.0336832526064093 0.8142542863566498 0.9590106712628641 0.7762854315091599 0.8745810031572304 0.8917331574182638 1.0 10.220807691673215 -10.88799819097392 1.2233737028049847 0.9984226389441736 0.9073721520004489 0.0 0.11717098976824807 0.934705038340525 2.551139846029517 0.06839247671968986 0.01764177646563437 1.2942012323517878e-11 10.88799819097392 -0.09105048694372475 ALS(ph)TTSSSTTNGNR ddPTM_A549_PD325901_60min_R1 1 ALSTTSSSTTNGNR 14 0 Q9BSQ5-3;Q9BSQ5;C9JUH3;A0A0A0MT72;Q9BSQ5-4;Q9BSQ5-2 Q9BSQ5-3 CCM2 Cerebral cavernous malformations 2 protein 1 ALS(0.333)T(0.333)T(0.333)S(0.001)SSTTNGNR 183.96 4.9367e-26 6791500.0 1732.2 1860.1 1899.0 1877.8 2301.1 2284.2 1778.4 1845.0 2476.4 2155.0 2571.2 True False 1908.0516688217565 2016.857155021518 2027.8775596146693 1993.7874412067774 2139.478674364043 2265.5982325240966 1846.0779851778213 1808.200027625499 2372.3255199129753 2018.9329322253996 2254.95870017971 0.8461581441246323 0.8944097977762447 0.8992969846645337 0.8841791386458128 0.948788407607437 1.0047182825758798 0.8186748542359988 0.8018772261688845 1.0520483234233566 0.8953303366773413 1.0 11.138885295264005 -8.779022628263004 24.99467240752891 1.0245783869932066 0.8914791917382066 0.2236177798415151 0.06720200252064853 136.47090416580048 193993.2813421314 0.01008781084238871 0.010750826541108673 1.6633259830052127e-09 8.779022628263004 -0.13309919525500002 ALS(ph)TWK ddPTM_A549_PD325901_60min_R1 2 ALSTWK 6 0 G3V5M2;P00491 G3V5M2 PNP Purine nucleoside phosphorylase 1 ALS(0.991)T(0.009)WK;ALS(0.986)T(0.014)WK 89.29799999999999 0.038054000000000004 4982200.0 3216.2 2868.1000000000004 2805.2 3234.8 3009.0 3600.1 2939.8999999999996 2740.3 4344.6 3409.3999999999996 4388.9 True False 3542.7062563586983 3109.8048525978265 2995.5777410379524 3434.6062492361725 2797.658220486467 3570.781979209353 3051.7795032750078 2685.6425667762383 4162.011570753479 3194.1299021481545 3849.0931235293756 0.9204002456324726 0.807931830380433 0.7782554604163997 0.8923157063258722 0.7268356806917654 0.9276943593235726 0.7928567601078766 0.6977338506982323 1.0812966683791678 0.8298396010796795 1.0 11.910302860261037 -8.774322457298496 24.999624588947505 1.0383901093969634 0.8185987117428563 0.2690091163403605 0.0953179097563959 94.24194213985213 182875.97558180842 0.012150637303716634 0.012975164840052657 1.6814251639012394e-09 8.774322457298496 -0.21979139765410716 ALSAAVADSLTNS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ALSAAVADSLTNSPR 15 0 Q14687-2;Q14687-3;Q14687;H7C3B5 Q14687-2 GSE1 Genetic suppressor element 1 1 ALSAAVADS(0.001)LT(0.003)NS(0.997)PR 160.93 1.0898e-19 5125200.0 3407.0 3510.9 3801.4 3827.7 3696.9 3973.4 3498.7 4131.1 4174.4 4050.7 4591.0 True False 3752.8761318991624 3806.77586450462 4059.385863675196 4064.1283356625713 3437.2424976126345 3941.04194777657 3631.8449430621017 4048.701969714744 3998.9644848670337 3794.9381107032114 4026.336104746833 0.9320821794968195 0.9454689736449565 1.0082083954415528 1.0093862583581097 0.8536899076955625 0.9788159371817704 0.9020222973388518 1.005554892683088 0.9932018542000183 0.9425288927641148 1.0 11.975251893188641 -8.301390306960235 24.969308932167834 0.9973574558530404 0.9494073409996538 0.12005121559647036 0.04546763608122588 565.7431462902099 353587.63582542725 0.006714254306157748 0.008117180485682322 4.995853483213366e-09 8.301390306960235 -0.047950114853386516 ALSAES(ph)EVEEPARGPGEAR ddPTM_A549_PD325901_60min_R1 1 ALSAESEVEEPARGPGEAR 19 1 Q8N8E2;Q8N8E2-2;C9JT52 Q8N8E2 ZNF513 Zinc finger protein 513 1 ALS(0.347)AES(0.653)EVEEPARGPGEAR 87.319 1.8962e-06 3416700.0 829.13 832.84 801.25 646.38 971.55 838.24 687.1 798.14 661.31 723.91 930.6 True False 913.3026672267539 903.0263496522338 855.6276433076637 686.3054245645097 903.3116796655451 831.4136513575863 713.2479664955468 782.2204715712821 633.5174404674726 678.2021990567468 816.1420995594426 1.1190485918074304 1.106457258043289 1.0483807216531724 0.8409141311727218 1.1068068662959023 1.0187118784907523 0.8739262033910045 0.9584366153804937 0.7762342376523014 0.8309854367552459 1.0 9.67267655334616 -7.70422690130598 5.739141903856236 0.8960919947041455 1.0386992505835873 0.41472963539904684 0.08988748354221969 0.19742518366967873 13.323926709441803 0.016309506689088878 0.02414609095220245 1.9759370231879846e-08 7.70422690130598 0.14260725587944179 ALSAS(ph)HTDLAH ddPTM_A549_MK2206_60min_R1 2 ALSASHTDLAH 11 0 Q07866-6;H0YG16;Q07866-4;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 ALS(0.029)AS(0.965)HT(0.006)DLAH;ALS(0.03)AS(0.785)HT(0.186)DLAH 99.973 0.00027182 45383500.0 2506.2 3613.2 3041.4 2726.6000000000004 4756.299999999999 3284.1000000000004 2502.9 2585.1000000000004 5485.9 4976.1 4855.4 True False 2929.1852892928414 3797.0964467750027 3472.716253189054 3394.6171224017266 4056.6545706325114 3631.6212821908507 2957.6445319376357 2951.545841536721 4243.3524091821555 3851.9955539484604 3649.6701777771545 0.8025890413683553 1.0403944087593249 0.9515150915100292 0.9301161357186614 1.1115126499192955 0.9950546502266963 0.810386798770677 0.8087157736906438 1.162667365127932 1.0554366192877551 1.0 11.833550377590294 -8.773302929914601 24.999069071201255 1.0768151371090176 0.9396611024088161 0.2823324461910529 0.09970674197723707 229.91401188671924 484477.0618616441 0.01903134447125472 0.020337799637244244 1.6853770278982904e-09 8.773302929914601 -0.1371540347002015 ALSAS(ph)HTDLAH ddPTM_A549_PD325901_60min_R1 2 ALSASHTDLAH 11 0 Q07866-6;H0YG16;Q07866-4;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 ALSAS(0.991)HT(0.009)DLAH;ALSAS(0.5)HT(0.5)DLAH 179.42 6.4271e-16 138706000.0 11407.4 11963.9 12385.1 14328.0 14065.3 13840.3 13898.0 14845.9 12128.7 13733.8 14675.5 True False 12565.470850315962 12972.139840310703 13225.62736365647 15213.008018751045 13077.401850650815 13727.589185536839 14426.895995277408 14549.786878116747 11618.972917690397 12866.64552417503 12870.506535659355 0.9762996363431188 1.0078966048748557 1.027591829972908 1.1820053839063362 1.0160751493671387 1.066592767542041 1.1209268225229427 1.1304750778692925 0.9027595678148775 0.9997000109145955 1.0 13.651781213380268 -8.765254682106594 24.999970716738844 0.9540809069215866 1.0668226127891676 0.3248978996030113 0.06241404433601994 75.43252199546247 494274.7605882802 0.011507645832101348 0.01247821405977638 1.7169012542482322e-09 8.765254682106594 0.11274170586758092 ALSASHT(ph)DLAH ddPTM_A549_MK2206_60min_R1 1 ALSASHTDLAH 11 0 Q07866-6;H0YG16;Q07866-4;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 ALSAS(0.172)HT(0.827)DLAH 182.46 1.6025999999999999e-18 49708000.0 2349.1 3194.8 2083.2 2733.6 3119.2 2348.2 2279.0 2027.2 4000.2 3609.2 3954.0 True False 2745.5706500190777 3357.401673905894 2378.629084843636 3403.3321227159668 2660.369811979255 2596.684965390991 2693.064800146178 2314.5618080396275 3094.1610870067725 2793.879213301735 2972.1126751515562 0.9237774438948797 1.129634721447662 0.8003159182793577 1.1450885261415675 0.8951106848072626 0.8736832176992007 0.9061112731901564 0.7787597783188357 1.0410645305864767 0.9400313913601097 1.0 11.537273095289953 ALSGGGSVAS(ph)PPPSPAMPK ddPTM_A549_MK2206_60min_R1 4 ALSGGGSVASPPPSPAMPK 19 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 ALSGGGS(0.001)VAS(0.972)PPPS(0.026)PAMPK;ALSGGGS(0.002)VAS(0.997)PPPS(0.001)PAMPK;ALSGGGSVAS(0.996)PPPS(0.004)PAMPK;ALSGGGSVAS(0.993)PPPS(0.007)PAMPK 148.03 7.4746e-21 15665900.0 4717.05 4643.99 4547.17 4260.15 5961.24 4119.76 4067.1400000000003 3659.0699999999997 7365.099999999999 6844.8 7789.3 True False 5513.172719199908 4880.349254914936 5192.027081282849 5303.886941245402 5084.349492806879 4555.710268724636 4806.086692087116 4177.754377931905 5696.916609647909 5298.554926079941 5855.001836256457 0.9416175901193046 0.8335350511239652 0.8867677972587115 0.9058728057780724 0.8683770961987753 0.7780886148513054 0.8208514406137246 0.7135359637398606 0.9729999697643779 0.9049621288364454 1.0 12.515453907849324 -8.950607878446755 18.81662132318419 0.9880890685789369 0.8445591307949805 0.3754742304941495 0.06385318537514666 5.266871338405309 2006.336478033711 0.010291158272939362 0.010948707063738074 1.120449072797565e-09 8.950607878446755 -0.1435299377839564 ALSGGGSVAS(ph)PPPSPAMPK ddPTM_A549_PD325901_60min_R1 2 ALSGGGSVASPPPSPAMPK 19 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 ALSGGGS(0.001)VAS(0.967)PPPS(0.032)PAMPK;ALSGGGSVAS(0.977)PPPS(0.022)PAMPK 143.97 4.4531e-21 9912600.0 2234.85 2253.66 2261.8 2316.3999999999996 2747.3999999999996 2348.1000000000004 2768.0 2600.6 2930.7 3495.2 3704.9 True False 2461.730326790384 2443.5838374204573 2415.2993493082986 2459.4787670739042 2554.4321020154584 2328.977852110074 2873.3377547077207 2548.728992868767 2807.532870783779 3274.512475505435 3249.2207872961308 0.7576371345447829 0.752052260337134 0.7433472538251894 0.7569441807986776 0.7861675980908496 0.7167804235452262 0.8843159461314402 0.7844123744480028 0.8640634338425778 1.0077839241667388 1.0 11.665878064006561 -9.550306217720399 0.34153437870911557 1.0314434045873238 0.7360050912791818 0.8662156011147317 0.035746141258917806 0.343503486709472 0.09392213054323498 0.03870424393156874 0.017370974976017913 2.8163964114194157e-10 9.550306217720399 -0.29543831330814196 ALSGTS(ph)PDDVQPGPSVGPPSKDKDK ddPTM_A549_MK2206_60min_R1 2 ALSGTSPDDVQPGPSVGPPSKDKDK 25 2 A0A075B797;M0R3B2;Q9Y314 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 ALS(0.094)GT(0.444)S(0.462)PDDVQPGPSVGPPSKDKDK;ALS(0.07)GT(0.179)S(0.751)PDDVQPGPSVGPPSKDKDK 60.541000000000004 7.9865e-05 10288700.0 3103.3 3801.1000000000004 3669.3 3018.4 5004.3 3808.6000000000004 3213.2 2905.3 5204.700000000001 5277.0 6034.4 True False 3627.0611715994273 3994.559754189212 4189.6619148505915 3757.9081355011263 4268.174099156124 4211.623524055931 3796.996847665512 3317.1351721080923 4025.84376019803 4084.9220349643306 4535.891939032513 0.7996357100987429 0.8806558462768924 0.9236688111543128 0.8284827297500991 0.9409779061153092 0.928510551103264 0.8371003760013287 0.7313082447055879 0.8875528373051863 0.9005774586057771 1.0 12.147170555259926 -10.149823871164608 0.9578050690859248 0.9897890742912718 0.8651561451932573 0.16618562398943626 0.06508248449146599 0.37920091701817826 0.6926225803245123 0.02570945611297389 0.011801444131569323 7.082329511780712e-11 10.149823871164608 -0.12463292909801449 ALSGTS(ph)PDDVQPGPSVGPPSKDKDK ddPTM_A549_PD325901_60min_R1 2 ALSGTSPDDVQPGPSVGPPSKDKDK 25 2 A0A075B797;M0R3B2;Q9Y314 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 ALS(0.006)GT(0.153)S(0.842)PDDVQPGPSVGPPSKDKDK;ALS(0.003)GT(0.125)S(0.872)PDDVQPGPSVGPPSKDKDK 108.32 8.8911e-13 13827200.0 2757.4 2879.5 3249.1 2690.3 3830.3 3696.7 2946.1 3715.6 3635.4 3443.8 3671.3999999999996 True False 3037.329218109408 3122.165570606129 3469.6034644254983 2856.4737208853926 3561.272941817649 3666.595300836978 3058.21544766778 3641.489443168188 3482.6167804440424 3226.3578802774136 3219.8410749221334 0.9433165014775957 0.9696644952209741 1.0775697879776271 0.8871474257326417 1.106039974939997 1.1387503965318067 0.9498032283291306 1.1309531614867827 1.0816113899436057 1.0020239524882257 1.0 11.652773766144826 -6.779410661582248 24.996965840505347 1.0512529186689756 0.9771663031712143 0.27097389221750623 0.06919009543553936 287.88988956273585 400436.9710408954 0.009839663568527602 0.018622251354790214 1.6618404986681415e-07 6.779410661582248 -0.0740866154977613 ALSGVLEQDRVQS(ph)LKDKNEATVSTGK ddPTM_A549_PD325901_60min_R1 2 ALSGVLEQDRVQSLKDKNEATVSTGK 26 3 E9PJ90;E9PN23;G5E991;E9PMN1;E9PLR4;Q9Y450-2;Q9Y450-4;Q9Y450 E9PJ90 HBS1L HBS1-like protein 1 ALS(0.007)GVLEQDRVQS(0.992)LKDKNEATVSTGK;ALS(0.204)GVLEQDRVQS(0.796)LKDKNEATVSTGK 72.842 5.0904000000000004e-06 19221200.0 4040.7 4453.3 4463.299999999999 5573.9 5934.1 5742.1 4958.700000000001 6655.299999999999 5248.4 5170.0 5837.799999999999 True False 4450.90888939388 4828.595219857709 4766.206378003237 5918.187143754632 5517.3092875336415 5695.338241387185 5147.406042004756 6522.554820518155 5027.827999802642 4843.5653176822825 5119.787608863218 0.8693542055706771 0.9431241271607818 0.9309383009857923 1.1559438781228444 1.077644173750928 1.1124168962649137 1.0053944489989635 1.2739893368284476 0.9820383937604406 0.9460480956860889 1.0 12.321868246841385 -6.034050371200858 23.271625442851732 1.0363652653041087 0.9139370779691691 0.3172141875538914 0.09267822305020797 278.19399726774327 190131.33650011622 0.013316419309233628 0.03526499549426653 9.245909299866232e-07 6.034050371200858 -0.12242818733493954 ALSIES(ph)LSPTDSSNGVNWR ddPTM_A549_MK2206_60min_R1 1 ALSIESLSPTDSSNGVNWR 19 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 ALS(0.49)IES(0.505)LS(0.004)PT(0.001)DSSNGVNWR 130.01 1.7608e-16 3241200.0 889.81 1333.0 1111.5 994.92 1472.0 1258.5 999.98 1253.5 1769.8 1868.6 1871.0 True False 1039.9881742341645 1400.8440062966563 1269.1274135002407 1238.6754446636564 1255.4707499466083 1391.673634675311 1181.663422049221 1431.1874636827506 1368.9431257898568 1446.481962200938 1406.3790630269507 0.7394792780801196 0.9960643208678169 0.9024077838365261 0.8807550376906595 0.892697269855865 0.9895437661593246 0.8402168754602518 1.017639910396849 0.9733813320880073 1.0285150001363599 1.0 10.45776978280153 -2.0000000000064833 0.15709723690135474 1.016194782973703 0.3606835363889522 0.4043397101610642 0.06619964265391663 45.95150865938055 0.44361686751249246 0.09375602576249137 7.003699051691434 0.009999999999850717 2.0000000000064833 -0.6555112465847508 ALSKAS(ph)PNTR ddPTM_A549_MK2206_60min_R1 1 ALSKASPNTR 10 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 ALS(0.018)KAS(0.979)PNT(0.002)R 50.354 0.02271 3524000.0 1235.9 1475.9 1489.1 896.58 1655.9 1136.9 1226.5 1524.7 1931.5 2353.7 2391.3 True False 1444.4897051460478 1551.0170059214074 1700.2767714288882 1116.2421402490052 1412.3193035574661 1257.2060033868577 1449.339173926848 1740.830894197917 1494.0183339716964 1821.997535284355 1797.474213477471 0.8036219347767308 0.8628869300554488 0.9459255430092983 0.6210059270277235 0.7857243753306103 0.6994292290594883 0.8063198698816902 0.9684872701622965 0.8311765046583361 1.013643212026636 1.0 10.811755358606202 -10.435203966291486 0.4189850045204602 1.036972834604195 0.7961994361016206 0.4178070831224594 0.0909610298989717 1.4895044534568993 0.39090306099479777 0.15271089805777185 0.028931128051394434 3.671098469598733e-11 10.435203966291486 -0.2407733985025745 ALSKAS(ph)PNTR ddPTM_A549_PD325901_60min_R1 3 ALSKASPNTR 10 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 ALS(0.005)KAS(0.954)PNT(0.041)R;ALS(0.002)KAS(0.499)PNT(0.499)R;ALS(0.004)KAS(0.957)PNT(0.039)R 76.58800000000001 0.00040779 102802800.0 15601.6 15575.800000000001 14735.900000000001 17418.800000000003 18563.5 20414.9 19315.8 19769.0 19384.8 17893.3 19637.7 True False 17185.462946709125 16888.427329274866 15735.966788165242 18494.719715034946 17259.66380059837 20248.64782293852 20050.873339011327 19374.691786519525 18570.124268457854 16763.51398431031 17222.387393636858 0.9978560204178559 0.9806089564281094 0.9136925345192966 1.0738766520760168 1.0021644157752068 1.1757166622799213 1.1642330927023223 1.1249713145854492 1.0782549389940528 0.9733559930549415 1.0 14.071997524736226 -6.277409909881724 24.32890985799273 1.062474302711674 0.9657081480196171 0.3506054180932139 0.06530149932201176 549.7759494967273 837507.7089384036 0.009919845291785408 0.023126610039720354 5.279467127755612e-07 6.277409909881724 -0.09676615469205696 ALSKASPNT(ph)R ddPTM_A549_MK2206_60min_R1 1 ALSKASPNTR 10 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 ALS(0.001)KAS(0.402)PNT(0.596)R 59.542 0.034541 4330000.0 847.17 1227.0 1259.9 1280.1 1586.5 1071.1 1282.9 1036.1 1519.2 2237.3 1871.0 True False 990.1515846820757 1289.4490590592632 1438.5727649743164 1593.7245574658727 1353.1279516238412 1184.4430910613623 1515.9863238734242 1182.9703479231732 1175.1036256638895 1731.8923761276671 1406.3790630269507 0.7040431777695636 0.9168574056300163 1.0228911982506872 1.133211236830914 0.9621360180885393 0.8421933475830369 1.0779357882437226 0.8411461596826287 0.8355525594463225 1.231454891258203 1.0 10.45776978280153 ALSKPGTAAELRQS(ph)VSEVVR ddPTM_A549_PD325901_60min_R1 2 ALSKPGTAAELRQSVSEVVR 20 2 A0A0A0MT38;Q9BZ29-3;Q9BZ29;Q9BZ29-4;A0A0D9SF41 A0A0A0MT38 DOCK9 Dedicator of cytokinesis protein 9 1 ALSKPGTAAELRQS(1)VSEVVR;ALSKPGTAAELRQS(1)VSEVVR 150.06 5.500700000000001e-22 22889000.0 3000.0 2799.3999999999996 3965.1 3619.0 3874.5 3435.4 3596.5 3650.0 4139.4 3906.0 4266.7 True False 3304.557791516726 3035.3152624951554 4234.195530083268 3842.5374106546647 3602.368486299371 3407.4232414032417 3733.366775580315 3577.1978866303907 3965.435413151253 3659.3744933978674 3741.922948839755 0.8831175405526077 0.8111645546940791 1.1315560443050143 1.0268884376269978 0.9627051480085512 0.9106075373518232 0.997713428796792 0.9559784997014864 1.0597319793505642 0.9779395630079761 1.0 11.869564136540824 -5.743169897872174 24.999530195860817 1.0147569384160855 0.8471409569170112 0.5060835183917247 0.05821260895106076 137.44998849458239 188080.3357440982 0.008118559000258662 0.03131695819713941 1.8064672899755541e-06 5.743169897872174 -0.1676159814990743 ALSLGT(ph)IPSLTR ddPTM_A549_PD325901_60min_R1 2 ALSLGTIPSLTR 12 0 Q5SNT2;H0Y4R5;H0Y994 Q5SNT2 TMEM201 Transmembrane protein 201 1 ALS(0.005)LGT(0.995)IPSLTR;ALS(0.117)LGT(0.878)IPS(0.005)LTR 145.28 8.1963e-12 12053400.0 2567.0 3024.8999999999996 2637.6000000000004 3107.6 3304.6 3123.8 3225.6 3370.1000000000004 3021.8 3480.3 3882.5 True False 2827.5999502744776 3279.818938887475 2816.60339717728 3299.549394128329 3072.496296251103 3098.360808492591 3348.3519731160472 3302.8807117076944 2894.804254592566 3260.5532640482843 3404.9771131952884 0.8304314115113125 0.9632425798626403 0.8272018587913889 0.9690371724795459 0.9023544635129193 0.9099505534076957 0.983369891133834 0.9700155395782426 0.8501684911109527 0.9575844875469738 1.0 11.733429385750938 -11.086618918907545 1.4137280325185453 0.9999909199674016 0.9075806123592568 0.1643157417912171 0.055370815783267066 0.44491317313493206 1.588677499862781 0.03865075103825189 0.008480153985560688 8.191832829602498e-12 11.086618918907545 -0.09241030760814484 ALSNS(ph)NRDKEIK ddPTM_A549_MK2206_60min_R1 1 ALSNSNRDKEIK 12 2 Q9Y5S2 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta 1 ALS(0.004)NS(0.996)NRDKEIK 88.507 5.7019e-05 8388500.0 1720.6 3190.6 2303.5 2050.5 3067.0 1944.7 1450.1 1685.6 2178.3 3207.8 2433.7 True False 2010.995215368792 3352.987911845545 2630.1709374699108 2552.8725920504444 2615.8483628303325 2150.4868632126145 1713.5643996015672 1924.5389619335017 1684.9185280303122 2483.155752086144 1829.345123297001 1.0992978797485768 1.8328897424246038 1.437766391904002 1.3955117378012525 1.4299370466059618 1.1755501112533782 0.9367091959734946 1.052037112857597 0.9210501105409837 1.3574014659468903 1.0 10.837111563520518 -7.421377287473061 1.9792338242218306 0.9664628994740134 1.4695869489456923 0.4297193456342616 0.20048129529644385 0.1344898802390868 1.0365157405054044 0.023105437887147057 0.03991707410412028 3.78985603290636e-08 7.421377287473061 0.5031240494716789 ALSNS(ph)NRDKEIK ddPTM_A549_PD325901_60min_R1 2 ALSNSNRDKEIK 12 2 Q9Y5S2 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta 1 ALS(0.197)NS(0.803)NRDKEIK;ALS(0.014)NS(0.986)NRDKEIK 88.73 5.6897e-05 30014000.0 4794.2 5090.799999999999 4515.799999999999 4285.299999999999 6262.9 5513.1 5275.1 6399.1 5023.6 5567.6 7076.7 True False 5280.903654696497 5519.819582164151 4822.269343711388 4549.993248377569 5823.015509832067 5468.203141462478 5475.8468171454815 6271.464930503166 4812.47556203958 5216.060785827438 6206.310762897386 0.8508925602415586 0.8893882038847907 0.7769945025215165 0.7331236578706908 0.9382410472648683 0.8810714368594836 0.8823030341763146 1.0104980511119883 0.7754164665439504 0.8404446675487364 1.0 12.599520222080798 -6.781969321106417 24.984647714664874 0.9013021082258957 0.8155413453832568 0.2663521826632347 0.07282120653114225 328.64863909249885 399960.106422932 0.013255269402301309 0.025070463417225873 1.6520784981927826e-07 6.781969321106417 -0.0857607628426389 ALSPLPT(ph)RTTPDPK ddPTM_A549_PD325901_60min_R1 1 ALSPLPTRTTPDPK 14 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ALS(0.008)PLPT(0.331)RT(0.331)T(0.331)PDPK 51.147 0.009658100000000001 1908000.0 1232.8 1265.0 1453.5 1253.2 1630.5 1732.5 1581.9 1538.8 1870.9 1554.1 1691.7 True False 1357.9529484606062 1371.6059895178857 1552.1432506055394 1330.6073177762987 1515.9793049196344 1718.391094408544 1642.1000701488954 1508.107426834752 1792.2725792300057 1455.973860775634 1483.631624569858 0.9152898374313845 0.9244922842053522 1.0461783268171736 0.896858287286829 1.021803040467781 1.158232991229712 1.1068111807235042 1.0164972233400524 1.2080307197210294 0.9813580653470886 1.0 10.53491720992344 -7.006237504503111 6.142888370795208 1.098015203767886 0.9517814064805614 0.4003746887188342 0.07367047664458218 0.12009937362386128 19.229692095119777 0.012211120905581279 0.022340754303633414 9.857402621570854e-08 7.006237504503111 -0.14623379728732466 ALSQTVPSSGTNGVSLPADCTGAVPAAS(ph)PDTAAWR ddPTM_A549_PD325901_60min_R1 2 ALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWR 35 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7EN31 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 ALSQTVPSSGTNGVSLPADCT(0.006)GAVPAAS(0.945)PDT(0.049)AAWR;ALSQTVPSSGTNGVSLPADCT(0.002)GAVPAAS(0.944)PDT(0.054)AAWR 83.221 1.8036000000000002e-06 7602100.0 2900.8999999999996 2482.8 2929.9 2870.9 3022.0 3218.8 3027.1 3280.6000000000004 2702.07 3335.2 3471.3999999999996 True False 3195.397232470291 2692.034269387357 3128.740632919967 3048.2289727130333 2809.7451453340295 3192.587159989739 3142.2979469926804 3215.1658594190862 2588.51139460154 3124.614902811208 3044.439807017677 1.0495846313350143 0.8842461799316915 1.027690094482397 1.001244618365133 0.9229103951595109 1.048661613420824 1.0321432336252576 1.0560779858441844 0.8502422641547435 1.0263349255941014 1.0 11.571961073717054 -8.749927089511573 24.998849736161493 0.9292810637672168 0.9994857373972663 0.02929114068524763 0.06729018131997021 290.56193025452797 630952.7100873495 0.012089204313239538 0.013650349883980048 1.7785779772779417e-09 8.749927089511573 0.07020467363004956 ALSS(ph)DSILSPAPDAR ddPTM_A549_MK2206_60min_R1 3 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.247)S(0.747)DS(0.006)ILSPAPDAR;ALS(0.016)S(0.983)DS(0.001)ILSPAPDAR;ALS(0.029)S(0.97)DSILSPAPDAR 390.42 2.4261999999999984e-293 303569000.0 16788.4 19226.6 16813.699999999997 16064.800000000001 21677.3 19409.2 17172.6 17343.2 26847.4 26744.2 28364.1 True False 19621.871483027688 20205.151816551617 19198.135485712104 20000.676721176274 18488.59788574567 21463.068661215766 20292.63913426516 19801.651711322436 20766.506766488077 20702.66664534643 21320.511160664213 0.920328379332177 0.9476860880253939 0.9004538090593327 0.938095553641181 0.8671742317255812 1.0066864016288017 0.9517895223687014 0.9287606456573128 0.9740154262718494 0.9710211208979975 1.0 14.379954406770135 -8.594179541100011 0.41530425417446065 1.0004428207895772 0.9175800226546975 0.32527012423944546 0.03262520408236935 0.6235093551495979 0.27525758104649245 0.014952510590101048 0.01611691274368532 2.5457775885071004e-09 8.594179541100011 -0.08286279813487973 ALSS(ph)SVIR ddPTM_A549_MK2206_60min_R1 1 ALSSSVIR 8 0 Q8NEJ9-2;Q8NEJ9;H0YJ17 Q8NEJ9-2 NGDN Neuroguidin 1 ALS(0.112)S(0.778)S(0.11)VIR 99.13600000000001 0.0024171999999999996 7814000.0 1712.2 2012.3 1921.7 1569.4 2509.0 2159.1 1894.4 2445.6 2768.7 3043.7 3419.2 True False 2001.177500729075 2114.7174747717645 2194.2259563863363 1953.9030704530423 2139.929423652202 2387.5745289054144 2238.5879584892155 2792.271289335889 2141.593870705378 2356.1260560585442 2570.11827488068 0.7786324545013328 0.8228093996452136 0.853745128320293 0.7602385810605367 0.8326190450326844 0.9289745737542991 0.8710058133776524 1.086436883713269 0.8332666599963393 0.9167383770180496 1.0 11.327619037333195 -7.205381610821779 3.6103901402104213 0.9298530067548133 0.8074627289590919 0.4890191538911789 0.06602748243346696 0.20723081360019308 5.484187904020184 0.01148176389406707 0.020219345593145838 6.231870057749879e-08 7.205381610821779 -0.12239027779572142 ALSSDS(ph)ILSPAPDAR ddPTM_A549_MK2206_60min_R1 1 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.298)S(0.298)DS(0.404)ILSPAPDAR 74.786 0.00021779999999999998 1531700.0 0.0 0.0 0.0 84.046 166.11 194.55 0.0 126.02 170.0 0.0 189.31 True False 0.0 0.0 0.0 104.63727377296833 141.67543904458648 215.1371518681619 0.0 143.883720920064 131.4952714342161 0.0 142.29910230979803 0.0 0.0 0.0 0.7353333371363335 0.995617236826598 1.511865840163832 0.0 1.0111358299844795 0.9240766055427321 0.0 1.0 7.152782750463522 -6.337206123478005 3.419507611412296 0.9351542350650385 1.4619728768450982e-16 0.3485359989003549 0.4369781826128601 0.11992893810197341 2.715709848373761 0.04465220745184862 0.11425885316560162 4.600381798880002e-07 6.337206123478005 -0.9351542350650384 ALSSDSILS(ph)PAPDAR ddPTM_A549_MK2206_60min_R1 2 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALSSDS(0.002)ILS(0.998)PAPDAR;ALSSDS(0.013)ILS(0.987)PAPDAR 203.93 6.907699999999998e-39 99016000.0 7906.5 7287.200000000001 5507.700000000001 5554.0 8476.0 6553.3 6760.0 6300.5 8066.5 9621.7 8867.4 True False 9240.923904634048 7658.087353852207 6288.774678664215 6914.730249328536 7229.191628089306 7246.765856271521 7988.204497142683 7193.615169472016 6239.450629553557 7448.151287439132 6665.379852210144 1.3864061928248381 1.1489348729784539 0.9434983178909072 1.0374097804847102 1.084588093759159 1.0872247369170713 1.1984620043063126 1.079250594710925 0.9360982821533637 1.117438383495793 1.0 12.702471379823942 -5.382218374308112 2.749890170874848 1.0106102604411458 1.41202119148074 0.5294551033329713 0.08271353597467075 0.17590596206592435 2.036943701417658 0.012529141214050825 0.13792464546158759 4.14745445639208e-06 5.382218374308112 0.40141093103959413 ALSSDSILS(ph)PAPDAR ddPTM_A549_PD325901_60min_R1 2 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALSSDS(0.034)ILS(0.966)PAPDAR;ALS(0.001)S(0.001)DS(0.327)ILS(0.672)PAPDAR 257.11 5.9415e-77 116598000.0 36127.0 40775.0 39504.0 39428.0 46257.0 40653.0 43014.0 38803.0 41414.0 50233.0 51513.0 True False 39794.58644470824 44211.252349874936 42184.97899684986 41863.37801251506 43008.067897986846 40321.93544645918 44650.92130816398 38029.04372463537 39673.51360106444 47061.27980718261 45177.22756781172 0.8808549923736676 0.9786180943377536 0.9337664409249007 0.9266477884167964 0.9519855514247983 0.8925278866644778 0.9883501868533711 0.8417746234549958 0.8781750394380416 1.041703582552579 1.0 15.463308117812637 -10.984943228879047 1.2991600697122458 0.9993648229669512 0.9171274457071359 0.4176109896516409 0.044436795446539154 0.406625116431709 1.2363156832239348 0.0288446492852162 0.006844064783295779 1.0352774896565681e-11 10.984943228879047 -0.08223737725981528 ALSSGGSIT(ph)SPPLS(ph)PALPK ddPTM_A549_MK2206_60min_R1 1 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;C9JHT0;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 2 ALSSGGS(0.005)IT(0.533)S(0.533)PPLS(0.929)PALPK 107.34 1.8642e-09 2709200.0 1297.2 1370.4 1593.1 970.9 1858.2 1570.1 1243.6 1546.8 2038.2 1724.9 1521.1 True False 1516.135646504938 1440.1475065483403 1819.0255352651668 1208.7705435853575 1584.8612415426553 1736.24693985197 1469.5460225808633 1766.0636368763287 1576.5509543365838 1335.243892004922 1143.3688897756788 1.3260249251686336 1.259565062008017 1.590934956803003 1.0572008337768488 1.386132905762019 1.5185361044698442 1.2852772501700465 1.5446140372271442 1.37886465902172 1.1678154827764184 1.0 10.15907522591227 -10.550269495849394 0.8504713277688746 0.9995440805057842 1.3716027864763585 0.336742992943733 0.1494905315682973 0.3968884794106562 0.5139945189788042 0.09093042736697841 0.025446919315790795 2.8166345625418583e-11 10.550269495849394 0.3720587059705742 ALSSGGSIT(ph)SPPLSPALPK ddPTM_A549_PD325901_60min_R1 2 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;C9JHT0;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSIT(0.725)S(0.275)PPLSPALPK;ALSSGGS(0.002)IT(0.499)S(0.499)PPLSPALPK 254.71 3.2660999999999997e-97 223640000.0 10242.7 9849.2 11413.1 10509.6 13076.4 11490.5 12596.2 14847.6 16310.8 19123.1 18698.6 True False 11282.531363722797 10679.226649770404 12187.66159854565 11158.754122966639 12157.95877513102 11396.925177663135 13075.555283905118 14551.452970283122 15625.313798334892 17915.66420243133 16398.790740191485 0.6880099601533822 0.6512203746582905 0.7432048979486726 0.6804620108736347 0.7413936166240178 0.6949857070698895 0.797348749128098 0.8873491467038019 0.9528332939842391 1.0924991047371662 1.0 14.001301812840909 -8.276513926834841 1.0917202865169968 0.9844028961344672 0.6934206628341345 0.913141392928202 0.041838751991445655 0.05848999425735177 0.136144190492494 0.0050439146844584865 0.006600316013753631 5.290370319249391e-09 8.276513926834841 -0.2909822333003327 ALSSGGSITS(ph)PPLS(ph)PALPK ddPTM_A549_MK2206_60min_R1 1 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;C9JHT0;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 2 ALSSGGS(0.001)IT(0.104)S(0.896)PPLS(0.999)PALPK 91.65700000000001 5.2015999999999995e-06 2228800.0 652.32 787.1 505.1 640.86 1093.5 926.68 996.03 783.56 1104.4 909.74 1166.8 True False 762.4156683072013 827.1600280240796 576.7307751317784 797.8707287692984 932.6475985506903 1024.7406625196 1176.9957581788497 894.6320295518598 854.2551633644015 704.22910215813 877.051357958229 0.8692942110962589 0.9431146996336723 0.6575792510878777 0.9097195067649598 1.063389948704816 1.1683929945735343 1.341991831491932 1.020045201953234 0.9740081417274161 0.802950814417039 1.0 9.77651751557156 -6.589731370945474 4.9055106146105105 1.0349234396192875 0.8274507190704186 0.3430735714350711 0.14023577805287876 0.1823506260861504 8.505644606223987 0.01927804770697771 0.04123750738663656 2.5719861704155127e-07 6.589731370945474 -0.2074727205488689 ALSSGGSITS(ph)PPLS(ph)PALPK ddPTM_A549_PD325901_60min_R1 2 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;C9JHT0;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 2 ALSSGGS(0.002)IT(0.108)S(0.894)PPLS(0.996)PALPK;ALSSGGS(0.001)IT(0.077)S(0.922)PPLS(1)PALPK 114.29 8.1903e-14 13572000.0 2255.2 2625.4 3022.6000000000004 3015.5 3242.0 3081.8 2920.4 3284.3999999999996 3664.7 3660.3 3620.1 True False 2484.146243809507 2846.651671842101 3227.731812370351 3201.760586302609 3014.293104292827 3056.7028425675344 3031.5374201041996 3218.8900654380423 3510.685403337539 3429.1880333292947 3174.8506497046405 0.7824450715628495 0.8966253805063013 1.0166562678060556 1.008475969287082 0.9494283154935964 0.9627863417297763 0.9548598515606479 1.0138713346208896 1.105779701374029 1.0801100308917888 1.0 11.632473011350559 -3.8790145995335066 0.4854808736615703 1.0375723593590018 2.7022719534754787e-24 0.6614349425573797 0.04880195103814644 7.232452514651821 0.4114263298593921 0.011427289820284979 5.82232496544283 0.0001321251217376201 3.8790145995335066 -1.0375723593590018 ALSSGGSITS(ph)PPLSPALPK ddPTM_A549_MK2206_60min_R1 2 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;C9JHT0;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSIT(0.029)S(0.926)PPLS(0.045)PALPK;ALSSGGSIT(0.015)S(0.985)PPLSPALPK 217.48 1.4075999999999996e-66 222937000.0 3552.6000000000004 3344.2 3448.3 3458.4 4183.1 2906.3 3448.0 3151.8 4633.7 4346.4 4291.1 True False 4152.192027269072 3514.4054957669 3937.3207916984998 4305.708155253475 3567.771531319063 3213.8427369541964 4074.4569683650857 3598.577301982684 3584.174348498396 3364.5452212941022 3225.501441664859 1.2873012467561933 1.0895687257708748 1.2206848649449777 1.3348957466380984 1.106113761176166 0.9963854597737694 1.263201099752736 1.1156644531292659 1.111199115337678 1.0431076476460897 1.0 11.655307746335243 -14.99999999972061 0.07192635507569237 0.37180008026826816 1.3817538964838407 0.3498007268372866 0.08966782632663238 141.58441814580084 0.7602965126947219 14.471419434057099 1.8506545077268917 1.0000000006433209e-15 14.99999999972061 1.0099538162155726 ALSSGGSITS(ph)PPLSPALPK ddPTM_A549_PD325901_60min_R1 3 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;C9JHT0;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSIT(0.018)S(0.923)PPLS(0.059)PALPK;ALSSGGSIT(0.028)S(0.972)PPLSPALPK;ALSSGGS(0.004)IT(0.137)S(0.859)PPLSPALPK 174.39 2.8193e-34 24695300.0 6471.2 6446.9 7508.0 7127.3 8766.0 8434.1 8269.900000000001 9186.900000000001 9088.1 10652.1 10499.7 True False 7128.1514601543495 6990.202888397521 8017.538029271685 7567.5371337272645 8150.306401058274 8365.415485916947 8584.615569962922 9003.66007251637 8706.158761719067 9979.524588101247 9208.303463082188 0.7741004071740731 0.7591195182068611 0.8706856872620995 0.821816653205114 0.8851040187515951 0.9084643571376055 0.9322689683697168 0.9777762112873157 0.9454682718291906 1.0837527920437275 1.0 13.168719663469945 -5.150836278633818 0.25828150646620424 0.9974591712006884 0.5388654284174123 0.8425908182050439 0.03698197540810932 1.8496897642737695 0.08876229186370332 0.012534968742085102 0.2725366404183396 7.06583873729327e-06 5.150836278633818 -0.45859374278327614 ALSSGGSITSPPLS(ph)PALPK ddPTM_A549_MK2206_60min_R1 2 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;C9JHT0;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSITS(0.002)PPLS(0.998)PALPK;ALSSGGSITSPPLS(1)PALPK 118.33 4.8762e-14 2127210.0 1127.4 2203.05 1607.62 1530.82 1918.7800000000002 1555.8400000000001 1255.37 1490.1100000000001 2124.4 1978.28 2227.3 True False 1317.6775577163635 2315.175835012639 1835.604689600771 1905.8709687211215 1636.5300037924962 1720.4779561169933 1483.4544792275162 1701.3376557704848 1643.2267919696974 1531.3851740248692 1674.1999396472083 0.7870491011927929 1.3828550462739226 1.0964070934010273 1.1383771577024018 0.977499738852786 1.0276418696320924 0.8860676936472196 1.0162093639359437 0.9814997319352206 0.914696708415583 1.0 10.709256115246149 -6.7635240568148385 24.94986911882405 0.986907111694622 1.1209519647853823 0.16505994467705853 0.13456342792325252 62.25571541544786 745103.3667662175 0.016724654234396816 0.032755651703156745 1.7237566045685092e-07 6.7635240568148385 0.1340448530907603 ALSSGGSITSPPLS(ph)PALPK ddPTM_A549_PD325901_60min_R1 2 ALSSGGSITSPPLSPALPK 19 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;C9JHT0;C9J0V6;C9JXQ0;C9JPV7;F8WCD5;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSITS(0.002)PPLS(0.998)PALPK;ALSSGGSITSPPLS(1)PALPK 172.91 3.463e-34 7278200.0 2970.2 2639.7 2096.46 2989.3 3086.0 3520.2 2670.8 3384.1 3709.9 4023.5 4451.2 True False 3271.7325174543253 2862.156783027956 2238.73838263811 3173.942271807125 2869.2500061220435 3491.532658318591 2772.43875551784 3316.601470724906 3553.9858045247715 3769.4555233451933 3903.730618481617 0.8381040694675004 0.7331850126844079 0.5734869030253125 0.8130536099956743 0.7350020497157301 0.8944092201927208 0.7102023747212862 0.8495979346072094 0.9104075439270752 0.9656033911508344 1.0 11.930637786131152 -8.678388518175593 0.5000433634811446 0.9944883902421504 0.725346101442301 0.566377534535401 0.0784561683776768 0.37058339826682535 0.21772909995534015 0.029285815736957925 0.030018049475544963 2.097063019707457e-09 8.678388518175593 -0.26914228879984936 ALSSLHGDDQDS(ph)EDEVLTIPEVK ddPTM_A549_PD325901_60min_R1 1 ALSSLHGDDQDSEDEVLTIPEVK 23 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 ALSSLHGDDQDS(1)EDEVLTIPEVK 169.36 8.0484e-41 4796400.0 1256.5 904.31 1216.6 1520.3 1167.0 1588.1 1077.8 1571.5 1441.0 1238.3 1674.3 True False 1384.0589550135885 980.5193773762211 1299.1657920101143 1614.2054781481863 1085.0339459314414 1575.1670401328774 1118.8162687947909 1540.1551996821 1380.4397812124853 1160.1135266703996 1468.3717142621692 0.9425807794922375 0.6677596468608867 0.8847662886661652 1.099316652908488 0.7389368341766592 1.0727304434111706 0.76194349014478 1.0488864534250448 0.9401160263470015 0.7900680157499057 1.0 10.520001513360414 -2.0000000004061134 0.15436079365693725 1.0086531651970554 0.30490660377046863 0.0 0.14196407868845143 83.73296247951491 0.7990175984691769 0.19125787180969936 13.40335780611632 0.009999999990648894 2.0000000004061134 -0.7037465614265868 ALSSS(ph)VIR ddPTM_A549_MK2206_60min_R1 1 ALSSSVIR 8 0 Q8NEJ9-2;Q8NEJ9;H0YJ17 Q8NEJ9-2 NGDN Neuroguidin 1 ALS(0.018)S(0.072)S(0.91)VIR 95.60799999999999 0.0025057 7776000.0 1499.6 1447.2 1393.2 1512.4 1916.6 1783.3 1424.3 1813.3 2102.0 2077.0 2159.3 True False 1752.695818300034 1520.8562985090182 1590.7767093913951 1882.938067894215 1634.6706789046666 1972.0076223412655 1683.0768735621773 2070.3408279983505 1625.9003562042476 1607.8042574608514 1623.0862163517343 1.0798537999044977 0.9370151031948866 0.9800937826747353 1.1600973804870074 1.0071373057304196 1.2149740429524525 1.0369608567961879 1.2755581355696097 1.001733820313525 0.99058462900065 1.0 10.664523920776851 -4.158909332754743 16.11189933071963 1.039972302866648 1.049911223077316 0.0 0.1057092059919798 0.0 0.0 0.013689921410363844 0.0 6.935705869738652e-05 4.158909332754743 0.00993892021066789 ALSSS(ph)VIR ddPTM_A549_PD325901_60min_R1 2 ALSSSVIR 8 0 Q8NEJ9-2;Q8NEJ9;H0YJ17 Q8NEJ9-2 NGDN Neuroguidin 1 ALS(0.006)S(0.055)S(0.939)VIR;ALS(0.001)S(0.008)S(0.991)VIR 121.05 0.0011886 30996000.0 3760.6 3723.1 3513.3 3693.0 4459.5 3552.1 3427.5 4214.3 4107.3 4269.700000000001 4465.799999999999 True False 4142.373343592601 4036.858703220584 3751.733665189163 3921.1082225884693 4146.28010443981 3523.1728752950007 3557.935388099966 4130.242480445605 3934.6844645204997 4000.110413328442 3916.534911038639 1.0576628161586004 1.030722001696657 0.9579216706622508 1.0011676932936153 1.0586603205689908 0.8995637611616945 0.9084395949266351 1.0545654703101555 1.0046340844379318 1.0213391439596895 1.0 11.935362102923655 -5.55250217041373 8.385562903014547 0.9940893154031779 1.0510951351783842 0.15971362122967325 0.048979157693645727 0.2662951627374469 67.07432399160604 0.00650136942967661 0.02578010808270844 2.8021916175045682e-06 5.55250217041373 0.057005819775206246 ALST(ph)PVVEK ddPTM_A549_PD325901_60min_R1 1 ALSTPVVEK 9 0 P29084;E5RK24;E5RIW4;E5RH41 P29084 GTF2E2 Transcription initiation factor IIE subunit beta 1 ALS(0.193)T(0.807)PVVEK 58.699 0.011492 6588800.0 5290.3 5458.7 6049.2 5512.3 7179.7 5980.4 5491.9 5970.9 5877.6 6236.9 6542.6 True False 5827.367361486979 5918.723806309313 6459.735088794661 5852.7822516583865 6675.422640620363 5931.6976051953025 5700.897259782992 5851.805715419563 5630.584911904577 5843.101069603988 5737.901676958534 1.015592056045106 1.031513633298545 1.1258009377774396 1.020021356441358 1.1633909077645221 1.0337747035671572 0.993550879875802 1.0198511659616667 0.9812968623207845 1.0183341225709563 1.0 12.486307531371022 -7.549670157755238 5.717830594932131 0.9942579795278009 1.0720063558789885 0.3600233182457311 0.04291013275665588 0.11983865780875383 11.636149535485174 0.00607554254073099 0.009173430549642205 2.8205242775166464e-08 7.549670157755238 0.07774837635118759 ALST(ph)PVVEKR ddPTM_A549_PD325901_60min_R1 2 ALSTPVVEKR 10 1 P29084;E5RK24;E5RIW4;E5RH41 P29084 GTF2E2 Transcription initiation factor IIE subunit beta 1 ALS(0.024)T(0.976)PVVEKR;ALS(0.065)T(0.935)PVVEKR 150.06 1.7508e-08 44649000.0 7611.4 7545.3 8181.3 8441.6 9329.900000000001 9446.400000000001 8699.900000000001 9253.4 10256.5 9715.8 9193.5 True False 8384.10372478347 8181.168911232657 8736.5322161535 8963.018459735395 8674.600010407667 9369.471650343941 9030.97945526795 9068.833677848124 9825.454972939526 9102.342729891197 8062.757782398172 1.0398555867679455 1.0146861820769302 1.0835662501515606 1.111656669049712 1.0758849818538774 1.1620678560874618 1.120085670312893 1.1247806175755792 1.2186221188970234 1.1289366461885468 1.0 12.977057666651815 -5.920901408723197 3.476774828041515 1.1105571428369196 1.0272412742885908 0.30806407465982166 0.05117035305142676 0.34311126156688376 8.197273883230551 0.010803570590826405 0.03809401851348264 1.1997716381597696e-06 5.920901408723197 -0.08331586854832884 ALSTGEK ddPTM_A549_MK2206_60min_R1 2 ALSTGEK 7 0 P62937;F8WE65;C9J5S7;P0DN26;F5H284;A0A0B4J2A2;Q9Y536;A0A0H2UH34;P0DN37;A0A075B759;A0A075B767 P62937 PPIA;PPIAL4D;PPIAL4C;PPIAL4A;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C 0 ; 122.5 0.01765 36848000.0 15717.8 15584.3 12668.6 10402.099999999999 12586.3 13526.8 14410.9 13911.1 12891.2 21376.4 22291.0 False True 18370.58037668463 16377.474304072764 14465.197976310528 12950.614966968014 10734.87194297079 14958.19699763686 17029.17399228898 15883.041025957004 9971.363783016275 16547.45639344543 16755.529499697353 1.0963891279602025 0.9774369890470237 0.8633089140257731 0.7729158882864272 0.6406763775006149 0.8927319782945112 1.0163315932568153 0.9479283257651685 0.5951088435132046 0.9875818244803496 1.0 14.032349658125083 -5.590147695636267 2.1522194221491344 0.8217988604160702 1.0979524140042067 0.19429132289771722 0.1365945850487696 0.4604823948720448 3.6218968331902013 0.023450879094041616 0.18746202547197327 2.569521786644011e-06 5.590147695636267 0.27615355358813654 ALSTGEK ddPTM_A549_PD325901_60min_R1 2 ALSTGEK 7 0 P62937;F8WE65;C9J5S7;P0DN26;F5H284;A0A0B4J2A2;Q9Y536;A0A0H2UH34;P0DN37;A0A075B759;A0A075B767 P62937 PPIA;PPIAL4D;PPIAL4C;PPIAL4A;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C 0 ; 114.78 0.020327 71647000.0 15132.5 15509.400000000001 13847.3 13139.599999999999 16248.0 13741.6 13433.8 13235.8 15738.900000000001 17082.2 18720.5 False True 16668.740260042283 16816.431568244025 14787.061048579368 13951.203249803255 15106.796532557024 13629.692965612967 13945.030610257432 12971.801585715775 15077.448766499083 16003.626976733512 16417.99717902703 1.0152724524362546 1.024268148232232 0.9006616877403852 0.8497506180367147 0.9201363825214331 0.8301678223592371 0.8493746501596031 0.7900964681786184 0.9183488462136896 0.9747612210079529 1.0 14.002990523953839 -4.131853504450417 19.117478926281514 0.9299105837951185 0.9138302021313601 0.0 0.07781509161585426 0.0 0.0 0.011409726515122866 0.0 7.381531808395014e-05 4.131853504450417 -0.01608038166375836 ALSYAS(ph)LDKEDLLSPINQNTLQR ddPTM_A549_MK2206_60min_R1 2 ALSYASLDKEDLLSPINQNTLQR 23 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ALSYAS(1)LDKEDLLSPINQNTLQR;ALSYAS(1)LDKEDLLSPINQNTLQR 167.87 8.245600000000001e-41 27242000.0 3587.2 3368.2 3493.5 3235.7 4976.0 4060.0 3475.4 3943.6 5623.2 5660.0 5199.6 True False 4192.63166138029 3539.626993254613 3988.9308313658044 4028.4466452560946 4244.0369916673435 4489.626505190115 4106.835193693739 4502.617376768487 4349.554178405202 4381.402068959277 3908.3958183404225 1.0727244261459064 0.9056470116574846 1.0206056440464566 1.0307161384096066 1.0858769656215221 1.1487133631967945 1.050772589209651 1.1520372004390236 1.1128745348653308 1.1210231185897905 1.0 11.932360866666407 -6.3659214751348046 2.458483262318667 1.0707176311133526 0.9877189368084743 0.2966373183008967 0.05846586783939793 0.3425152560071756 4.001113175508838 0.009285653543042633 0.025634163600254285 4.3060446112526435e-07 6.3659214751348046 -0.08299869430487827 ALSYAS(ph)LDKEDLLSPINQNTLQR ddPTM_A549_PD325901_60min_R1 2 ALSYASLDKEDLLSPINQNTLQR 23 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ALSYAS(1)LDKEDLLSPINQNTLQR;ALS(0.001)YAS(0.999)LDKEDLLSPINQNTLQR 282.95 5.4542999999999985e-140 50276000.0 10372.099999999999 10039.6 10987.0 11664.5 12389.3 12308.2 12624.4 13666.900000000001 13734.8 12714.0 14072.400000000001 True False 11425.067956463545 10885.67232597926 11732.643890198186 12384.989672998427 11519.11830876469 12207.966099970701 13104.828450336758 13394.302958024356 13157.574120053596 11911.235870215185 12341.58401229347 0.925737566999748 0.8820320240202575 0.9506594841076544 1.0035170250967558 0.9333581732531642 0.9891733579587781 1.0618433125993405 1.0852985276997078 1.0661171294501028 0.9651302343645991 1.0 13.591239952320516 -7.501174867320284 3.442266673942382 1.0389243114550932 0.9404524256129778 0.5587430221721823 0.04075933658179212 0.1381826695166365 3.420846769958285 0.006363588026214463 0.010105388959712134 3.153734526308535e-08 7.501174867320284 -0.09847188584211541 ALSYASLDKEDLLS(ph)PINQNTLQR ddPTM_A549_PD325901_60min_R1 1 ALSYASLDKEDLLSPINQNTLQR 23 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ALSYASLDKEDLLS(0.999)PINQNT(0.001)LQR 132.76 1.1984e-22 3917200.0 2448.8 2322.5 2140.3 2612.6 3502.7 2081.2 2015.9 2934.8 3261.5 2649.4 2607.1 True False 2697.400373288718 2518.2252258144586 2285.553628669445 2773.9743683548973 3256.6824356590027 2064.2513972196616 2092.6161776428066 2876.2631116939383 3124.4304971717665 2482.116431850566 2286.443227768561 1.17973643103364 1.1013722952885665 0.9996109244750485 1.2132268733661666 1.4243443248916092 0.9028220653588036 0.9152277004861745 1.2579639313856956 1.3665025482487199 1.0855797343689007 1.0 11.158889382230932 ALT(ph)PLTSSYR ddPTM_A549_MK2206_60min_R1 2 ALTPLTSSYR 10 0 O95486-2;O95486 O95486-2 SEC24A Protein transport protein Sec24A 1 ALT(1)PLTSSYR;ALT(0.997)PLT(0.003)SSYR 155.11 1.7505999999999998e-08 11134300.0 3266.1 3246.0 2894.0 2286.45 3515.3 3079.3 2806.8 3318.6 4900.3 5388.0 5407.200000000001 True False 3817.337831521566 3411.2075352130146 3304.4127167518645 2846.630352642639 2998.204026689753 3405.149482126091 3316.7592281923176 3789.021712786259 3790.3898741711128 4170.847057871481 4064.443008871904 0.9392031880356165 0.839280444520196 0.8130050561759536 0.7003740356129949 0.737666642180797 0.8377899443277464 0.8160427445907015 0.9322363985706151 0.9325730157606871 1.026179244921707 1.0 11.988841943629968 -8.446486728185299 1.20851223575286 0.9742480570950097 0.8019969679113567 0.6193264755648215 0.0612184705998047 0.22389347669969184 0.634103752356673 0.01240430258379395 0.015029872871466402 3.5769533139374163e-09 8.446486728185299 -0.17225108918365306 ALT(ph)PLTSSYR ddPTM_A549_PD325901_60min_R1 2 ALTPLTSSYR 10 0 O95486-2;O95486 O95486-2 SEC24A Protein transport protein Sec24A 1 ALT(1)PLTSSYR;ALT(0.999)PLT(0.001)SSYR 178.46 4.6776000000000003e-11 23940000.0 5252.0 4830.2 4617.3 4920.799999999999 4806.6 4995.5 4796.9 5449.8 5098.9 5622.799999999999 6003.2 True False 5785.179173681947 5237.257905588372 4930.657744080468 5224.746640052354 4469.000997869804 4954.818304252744 4979.448654464398 5341.09946371461 4884.610964902387 5267.77544840695 5264.8444574202085 1.0988319257045447 0.9947602342187039 0.9365248648763512 0.9923838552701513 0.8488381820228798 0.9411139007667136 0.9457921681705947 1.0144838099038098 0.9277787794885517 1.0005567098915165 1.0 12.362175194104289 -5.306923543920244 2.795847809742251 0.9580187004902584 1.117422915514881 0.46152026130823176 0.04449344465126809 0.26053458242092553 2.938690559318761 0.0062065907119295965 0.0896576338392304 4.932606331836592e-06 5.306923543920244 0.15940421502462254 ALT(ph)PPSYSTAK ddPTM_A549_MK2206_60min_R1 2 ALTPPSYSTAK 11 0 Q5HY92 Q5HY92 FIGN Fidgetin 1 ALT(0.986)PPS(0.014)YSTAK;ALT(0.82)PPS(0.177)YS(0.002)TAK 96.103 0.00029976 5115400.0 3782.8 4452.4 3775.6 3514.0 4587.1 3635.1 3769.2 3549.8 5510.0 5507.6 5878.4 True False 4421.244159419423 4679.008142261991 4311.036853271711 4374.930157749453 3912.343666494629 4019.7638692159076 4454.014850684937 4052.995020806565 4261.993797661945 4263.429334805677 4418.631044413482 1.0005913856530848 1.0589270964765674 0.9756498811373256 0.9901098584098167 0.8854198567769179 0.9097305995480509 1.0080078662182468 0.917251288932758 0.9645507295863556 0.9648756123677653 1.0 12.109383755784732 -5.861523810351678 6.8851149629224535 0.9686333103187338 1.029361578824267 0.2957675975745845 0.040203741284922746 0.219794355363958 12.954221577636032 0.005881772484309077 0.018620669673097917 1.3755493932161155e-06 5.861523810351678 0.060728268505533145 ALT(ph)PPSYSTAK ddPTM_A549_PD325901_60min_R1 2 ALTPPSYSTAK 11 0 Q5HY92 Q5HY92 FIGN Fidgetin 1 ALT(0.981)PPS(0.015)Y(0.002)S(0.002)TAK;ALT(0.966)PPS(0.027)Y(0.001)S(0.004)T(0.001)AK 88.18700000000001 0.00032371 8082400.0 6661.5 7347.7 6557.4 7597.4 8742.6 6908.799999999999 6573.5 7747.299999999999 8954.3 8089.0 9072.400000000001 True False 7337.7705760628905 7966.916465755393 7002.424596849518 8066.674143052704 8128.549936332657 6852.537023405339 6823.658139657223 7592.774023860724 8577.981910417038 7578.259159522624 7956.552314682021 0.922229916407725 1.0013025932166937 0.8800827695091157 1.013840395188187 1.0216171043497388 0.8612445129984917 0.8576149404643143 0.9542794069046683 1.0781028730984787 0.9524551413479251 1.0 12.957927710908644 -8.654155457236188 6.556240160631802 1.0367255780472058 0.9382061400460822 0.17529265314600495 0.06247551379532622 0.17780342417986036 9.81774287398413 0.010422503564577305 0.011809714393171545 2.2174025506881764e-09 8.654155457236188 -0.09851943800112362 ALT(ph)SELANAR ddPTM_A549_MK2206_60min_R1 1 ALTSELANAR 10 0 P26038 P26038 MSN Moesin 1 ALT(0.607)S(0.393)ELANAR 91.93700000000001 0.00066821 2530000.0 636.7 707.13 750.48 480.27 909.7 681.75 509.13 600.96 820.35 965.26 917.27 True False 744.1593941795356 743.1198966035669 856.9093488831855 597.9361715601395 775.8843350723034 753.892332490976 601.6323307145344 686.1479203628132 634.54203482976 747.2070955978153 689.4865436358803 1.0792950218511128 1.077787381730267 1.2428224405431207 0.8672194940992369 1.125307436720694 1.0934112339821218 0.8725802356372863 0.9951578122823668 0.9203109773304923 1.0837152697100603 1.0 9.429378585430987 -7.73760471870825 24.998819716338385 0.9582720300993238 1.0804848449858473 0.22618136668961364 0.096126048081014 209.9351155190774 220188.5788885094 0.012922606976640796 0.01916146258944916 1.829764853376416e-08 7.73760471870825 0.12221281488652347 ALT(ph)SELANAR ddPTM_A549_PD325901_60min_R1 1 ALTSELANAR 10 0 P26038 P26038 MSN Moesin 1 ALT(0.946)S(0.054)ELANAR 96.756 0.00056134 2696600.0 2414.7 2381.2 2038.0 1951.0 2411.6 2357.3 2020.7 2377.1 2334.4 2342.0 2865.4 True False 2659.8385663918143 2581.872080822126 2176.310935489571 2071.5088389575158 2242.2175355683485 2338.1029303603245 2097.598844269469 2329.686875701126 2236.2932860946744 2194.1257203117807 2512.973965267169 1.0584425478156638 1.0274169635289603 0.8660300367489857 0.824325626762823 0.8922565719179526 0.9304127152434494 0.834707749965273 0.9270636735201685 0.8898991063987887 0.8731191610568517 1.0 11.29518000945228 ALT(ph)TPTHYK ddPTM_A549_PD325901_60min_R1 3 ALTTPTHYK 9 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALT(0.494)T(0.494)PT(0.012)HYK;ALT(0.483)T(0.483)PT(0.034)HYK;ALT(0.664)T(0.208)PT(0.121)HY(0.006)K 77.67699999999999 0.0020068 52730700.0 10023.9 9568.900000000001 9205.0 9940.400000000001 11486.9 10535.099999999999 10610.0 10703.2 11023.0 10342.300000000001 10632.3 True False 11041.518948794836 10375.304785057477 9829.706654161682 10554.395931713632 10680.099771653704 10449.30563850127 11013.769356014776 10489.71627950204 10559.74164351507 9689.285412972047 9324.594503702836 1.184128590729624 1.112681605718876 1.0541698784068587 1.1318879257990722 1.1453688165649016 1.1206176991773535 1.181152633676581 1.1249514684350648 1.1324612174096955 1.039110645414596 1.0 13.186825273277483 -10.58717391866619 0.7529239217417776 0.9947032097426793 1.1310050116572121 0.6015505681654041 0.034758349815189535 0.3434930808133799 0.32808531349175213 0.027828401335414966 0.006619677445497103 2.5871766403741233e-11 10.58717391866619 0.13630180191453278 ALT(ph)TPTHYKLT(ph)PRPATR ddPTM_A549_MK2206_60min_R1 1 ALTTPTHYKLTPRPATR 17 2 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 2 ALT(0.498)T(0.498)PT(0.016)HY(0.003)KLT(0.977)PRPAT(0.007)R 53.342 0.0042887 11623000.0 1686.1 2202.9 1866.9 2067.4 2095.7 1631.7 1142.8 1646.0 2160.1 3195.3 3214.3 True False 1970.6724588128081 2315.018200653343 2131.6544923649108 2573.9130928091117 1787.4253061570032 1804.3654109652011 1350.4319673571974 1879.3255406635885 1670.8407989708844 2473.4795107677705 2416.1005998329933 0.81564172408592 0.9581630006686652 0.8822705861305012 1.0653170207345781 0.739797550764465 0.7468088916040678 0.558930355569856 0.7778341434928214 0.6915443831628438 1.0237485603615775 1.0 11.238464810458614 -4.888976894236374 14.426597166638812 0.8360593140011306 0.00012884126398030483 0.00020562457928385847 0.1507601497730578 6834391.55981216 9184205.488133699 0.022258457552486195 183232508.4519555 1.2912879721630841e-05 4.888976894236374 -0.8359304727371504 ALT(ph)TPTHYKLT(ph)PRPATR ddPTM_A549_PD325901_60min_R1 1 ALTTPTHYKLTPRPATR 17 2 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 2 ALT(0.743)T(0.279)PT(0.417)HY(0.002)KLT(0.535)PRPAT(0.025)R 58.479 0.0018027999999999998 26024000.0 2463.1 2599.8 2668.8 2778.7 3756.8 3990.1 3421.5 3494.2 3288.3 3007.3 3454.0 True False 2713.1520987616177 2818.894269998892 2849.9208167981187 2950.3339881144275 3492.9353282564166 3957.605948513437 3551.7070548166416 3424.5054398531274 3150.1041863712785 2817.4185647709705 3029.1798967099885 0.8956721592231579 0.930580013772213 0.9408225704565899 0.9739712030040883 1.1530960350192856 1.3064941942906123 1.172497895775082 1.1305057991347771 1.0399198112309627 0.9300928504876804 1.0 11.564711544005199 -6.567518634500131 6.631039655110618 1.0695577731841697 0.928438474854529 0.3895209098897485 0.09717017270087597 0.20486214299218944 22.36485554179845 0.015650676165436694 0.032976047557355975 2.706957052609615e-07 6.567518634500131 -0.14111929832964065 ALTHNGT(ph)PR ddPTM_A549_MK2206_60min_R1 3 ALTHNGTPR 9 0 Q9HB90 Q9HB90 RRAGC Ras-related GTP-binding protein C 1 ALT(0.001)HNGT(0.999)PR;ALTHNGT(1)PR;ALT(0.021)HNGT(0.979)PR 103.34 0.00069406 311680000.0 3076.63 3717.8 3661.3 3518.2 5429.6 4210.58 3820.1 3926.4 6408.5 6483.200000000001 7043.599999999999 True False 3595.889927618321 3907.0201399922803 4180.527394555495 4380.159157937999 4630.913032547626 4656.1407808431995 4514.162721824667 4482.979224095691 4956.98498227161 5018.640617222049 5294.479726529469 0.6791772021715581 0.7379422231829625 0.7896011715009117 0.8273068146790682 0.8746681962616918 0.8794331117205542 0.8526168679436421 0.8467270545267124 0.9362553524255183 0.9479006203526946 1.0 12.370273206304798 -2.762456141468608 0.14375933280846542 1.0421057144520545 1.5882685716943694e-18 0.883394309963199 0.03034661913125343 10.207649080970372 0.11334731785202126 0.06303628958095991 2.1317226738377197 0.00172800047900997 2.762456141468608 -1.0421057144520545 ALTHNGT(ph)PR ddPTM_A549_PD325901_60min_R1 3 ALTHNGTPR 9 0 Q9HB90 Q9HB90 RRAGC Ras-related GTP-binding protein C 1 ALTHNGT(1)PR;ALTHNGT(1)PR;ALT(0.005)HNGT(0.995)PR 111.5 0.000283 384237000.0 6468.4 6864.6 7326.0 7362.5 7028.500000000001 7184.900000000001 7762.6 8428.0 7730.1 7913.200000000001 7486.9 True False 7125.067206215596 7443.103933315794 7823.186414816781 7817.2649035493105 6534.842407008681 7126.388556546 8058.009990857712 8259.896928361899 7405.230779146862 7413.55920152484 6566.058763369427 1.0851360706615591 1.1335725435232482 1.1914584832016106 1.1905566467300115 0.9952458000322972 1.0853373101536232 1.227221729389866 1.2579687794513836 1.1278045241475736 1.1290729292408148 1.0 12.680811946123741 -10.265090181704617 0.936985478279283 1.0087645451285263 1.1438804351629204 0.057067878840871944 0.0787539137935836 0.4517385180506158 0.7762058282492778 0.03458172990053322 0.014150531592946046 5.431375367027698e-11 10.265090181704617 0.13511589003439406 ALTQPLGLLR ddPTM_A549_PD325901_60min_R1 2 ALTQPLGLLR 10 0 A0A494C017;C9JJV6;C9JZL8;A0A499FIY8;C9JC07;Q96S97 A0A494C017 MYADM Myeloid-associated differentiation marker 0 ; 66.435 0.014056 2150100.0 2375.9 2471.8999999999996 2624.0 1998.88 2407.4 2593.1000000000004 2260.7 2449.0 2917.5 2608.7 2586.1 False True 2617.0996189548637 2680.215688133803 2802.0804193938343 2122.3462778141443 2238.3125290791345 2571.9826533395653 2346.7321756025085 2400.1527737966676 2794.8876208795446 2443.9862367964724 2268.0260946385943 1.15391071784467 1.1817393523247317 1.2354709789352492 0.9357680155581879 0.9868989313528183 1.1340181047385198 1.034702458296211 1.0582562429375961 1.23229958750757 1.0775829442940854 1.0 11.147221523879232 -6.164022385285286 22.38912377388463 1.0864504900697558 1.1895107045345326 0.31061809768289983 0.08012352272844647 28.007447269254342 6430.946920506401 0.014330089593375785 0.03791386499739343 6.854528945415101e-07 6.164022385285286 0.10306021446477676 ALTQPS(ph)PVSTPSSVQFFLQEDDSADR ddPTM_A549_PD325901_60min_R1 1 ALTQPSPVSTPSSVQFFLQEDDSADR 26 0 P04920-2;P04920-3;P04920;C9J9M9 P04920-2 SLC4A2 Anion exchange protein 2 1 ALT(0.033)QPS(0.87)PVS(0.058)T(0.037)PS(0.002)S(0.001)VQFFLQEDDSADR 109.08 7.297e-13 8347600.0 3016.3 3412.1 3764.8 3983.2 4009.1 3704.1 3524.7 3525.6 3630.9 3854.7 3842.4 True False 3322.5125555173026 3699.6496417659932 4020.301967581518 4229.233217496448 3727.5146466441633 3673.935037690439 3658.834387289845 3455.279142220303 3478.3058997948715 3611.3135841527833 3369.809158980446 0.9859646047500644 1.0978810571235262 1.1930355037665936 1.2550364183756997 1.1061500728343747 1.09025017867837 1.0857690197497252 1.0253634491472854 1.0321967018592981 1.0716670926389806 1.0 11.718451174826326 -7.997194343515804 1.224225191952912 1.0139520694027915 1.134323672936042 0.2809042671374915 0.06507281096932084 0.3314174453927259 0.9920111639173802 0.011745326245745686 0.017222692558513848 1.0064811753034485e-08 7.997194343515804 0.12037160353325049 ALTQPS(ph)PVSTPSSVQFFLQEDDSADRK ddPTM_A549_MK2206_60min_R1 1 ALTQPSPVSTPSSVQFFLQEDDSADRK 27 1 P04920-2;P04920-3;P04920;C9J9M9 P04920-2 SLC4A2 Anion exchange protein 2 1 ALT(0.033)QPS(0.345)PVS(0.281)T(0.281)PS(0.03)S(0.03)VQFFLQEDDSADRK 85.412 3.6566e-07 4224700.0 689.53 902.22 1427.6 702.01 1137.4 980.88 1471.0 735.61 2288.6 1371.8 1463.4 True False 805.9058066100444 948.1391443068034 1630.0551466603176 874.0024815144269 970.0899667046698 1084.6760705445515 1738.2616590675852 839.8849702111437 1770.2357541432173 1061.9094272435227 1099.9973922146655 0.7326433792606402 0.8619467200716537 1.4818718282399443 0.79454959411746 0.8819020604690269 0.9860714927339355 1.5802416181804564 0.7635336012207922 1.609309046250679 0.9653744952117942 1.0 10.103284388190723 -7.5668729209609324 24.81688511023297 1.2680161572041626 0.9632538266868516 0.09545917648947666 0.30141801656486045 165.29148682427186 93239.43926609191 0.048306559227623995 0.07165022919556766 2.7109847779156776e-08 7.5668729209609324 -0.30476233051731105 ALTQPS(ph)PVSTPSSVQFFLQEDDSADRK ddPTM_A549_PD325901_60min_R1 2 ALTQPSPVSTPSSVQFFLQEDDSADRK 27 1 P04920-2;P04920-3;P04920;C9J9M9 P04920-2 SLC4A2 Anion exchange protein 2 1 ALT(0.003)QPS(0.609)PVS(0.163)T(0.163)PS(0.031)S(0.031)VQFFLQEDDSADRK;ALT(0.026)QPS(0.658)PVS(0.132)T(0.132)PS(0.026)S(0.026)VQFFLQEDDSADRK 120.08 6.521599999999999e-18 19732000.0 1691.83 2053.91 2026.66 2186.0 2751.8 2235.59 1967.81 2378.2 2502.0 2957.6 2047.0 True False 1863.5833361405817 2227.0002038977723 2164.201334896612 2321.024255233793 2558.523061194636 2217.3840962475024 2042.696086376949 2330.7649353381908 2396.8496409393742 2770.8566312528255 1795.231977002127 1.0380738311338433 1.240508320053801 1.2055273984761736 1.2928826385488583 1.4251768540058734 1.2351518492614701 1.1378451991413747 1.2983085000693642 1.3351197347441937 1.5434532510277041 1.0 10.809954563499685 -10.8812682752452 1.0952357077567993 0.9979971682500633 1.2550816801954006 0.0 0.187093958383505 0.36190146343053997 0.7610015129140557 0.07183300933009307 0.016747947895865395 1.3144126337382843e-11 10.8812682752452 0.2570845119453372 ALTSELANAR ddPTM_A549_MK2206_60min_R1 2 ALTSELANAR 10 0 P26038 P26038 MSN Moesin 0 ; 65.305 0.015587 4339300.0 2799.6000000000004 3018.3 2537.5 3143.6 3971.9 2936.2 2718.8999999999996 2641.3 4427.299999999999 4514.1 4472.0 False True 3272.1040363515444 3171.918577798348 2897.3556561015407 3913.7821411215677 3387.6387715441124 3246.9067351081835 3212.8889359883474 3015.7123636420033 3424.523618945322 3494.361674821391 3361.478979078849 0.9734120179588938 0.9436080360876014 0.861928833746718 1.1643036191748155 1.0077822269983172 0.9659161206469713 0.9557962301667524 0.8971385459826386 1.018755030228911 1.0395310208897857 1.0 11.714880412403936 ALTSELANAR ddPTM_A549_PD325901_60min_R1 2 ALTSELANAR 10 0 P26038 P26038 MSN Moesin 0 ; 107.56 0.00072849 11889600.0 3801.8 4786.0 4522.4 4677.4 5430.4 5212.5 4503.8 4770.4 5087.200000000001 3878.8 6030.5 False True 4187.755937262765 5189.333016468463 4829.317259400412 4966.312374853859 5048.987437862979 5170.0511281988665 4675.194573573928 4675.2506296935935 4873.402675214538 3633.8919060398493 5288.786730489165 0.791817887668054 0.9811953631165794 0.9131238421016352 0.9390267802298997 0.9546589218196729 0.9775495575183996 0.8839824352572286 0.8839930343081115 0.9214594808900136 0.6870936740729092 1.0 12.368721084758826 ALTT(ph)PT(ph)HYKLTPR ddPTM_A549_PD325901_60min_R1 2 ALTTPTHYKLTPR 13 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 2 ALT(0.091)T(0.924)PT(0.798)HYKLT(0.186)PR;ALT(0.078)T(0.933)PT(0.979)HYKLT(0.01)PR 91.20700000000001 8.977200000000001e-05 23386000.0 2013.29 1907.04 2025.0100000000002 2084.75 2164.9 1947.37 1785.32 2167.67 1952.3799999999999 2223.8999999999996 2197.81 True False 2217.6777186942377 2067.7529535574627 2162.4393559743557 2213.5202726892267 2012.8448924995507 1931.511264368465 1853.2613295645897 2124.434121345782 1870.3282581843364 2083.4825744668524 1927.493303065484 1.1505501550470991 1.0727679054806103 1.1218920203433203 1.1483932365258263 1.0442811341021645 1.0020845526656776 0.9614878176838094 1.1021745797856124 0.9703422861235199 1.08092856725016 1.0 10.912510132272695 -6.98099549669345 3.3075552726479414 0.9946231447953261 1.1194314529326577 0.4688381976541841 0.04772297487071291 0.10725267588379345 2.4569061367059555 0.005844328388264269 0.011249573836703549 1.0447310522384743e-07 6.98099549669345 0.12480830813733157 ALTT(ph)PTHYK ddPTM_A549_MK2206_60min_R1 2 ALTTPTHYK 9 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALT(0.058)T(0.896)PT(0.045)HY(0.001)K;ALT(0.094)T(0.837)PT(0.069)HYK 73.885 0.0019559 58535000.0 5629.5 6384.200000000001 5971.9 5889.6 7916.0 5690.0 5119.0 5771.5 7912.9 8381.4 8979.6 True False 6579.621971939217 6709.128510877058 6818.8052187873 7332.552264394195 6751.566886261788 6292.112023283681 6049.056038590739 6589.627799477461 6120.640784304758 6488.035918864897 6749.717495647676 0.9747996084549999 0.993986565393768 1.0102356466302735 1.0863495056085444 1.000273995262069 0.9322037592448772 0.8961939581162124 0.9762820153179088 0.9067995494998782 0.9612307364046696 1.0 12.720611405172633 -7.129866971280636 5.346294132122593 0.9503093772127402 1.017455798307905 0.44403888917349255 0.03770790032169589 0.2109441205248032 8.361765307403065 0.006718723554508255 0.011782530525186413 7.415373467815668e-08 7.129866971280636 0.06714642109516467 ALTT(ph)PTHYK ddPTM_A549_PD325901_60min_R1 3 ALTTPTHYK 9 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALT(0.079)T(0.92)PT(0.001)HYK;ALT(0.112)T(0.859)PT(0.028)HY(0.001)K;ALT(0.105)T(0.87)PT(0.024)HY(0.001)K 84.213 0.0014532 36508900.0 8981.1 8497.6 9322.5 8138.1 10606.7 11131.0 8884.3 10126.7 10403.8 10032.0 10779.3 True False 9892.854660463623 9213.722574329788 9955.18091074658 8640.771954033911 9861.721983128547 11040.352826471284 9222.396898175497 9924.715024257539 9966.564466189064 9398.577807928174 9453.514435612617 1.0464737455941204 0.9746346331921278 1.0530666641015662 0.9140274775995476 1.0431805071326872 1.1678569807732921 0.9755522098145353 1.0498439592867017 1.054270825318013 0.9941887614327335 1.0 13.206635049578242 -5.787895961357543 24.9912257123513 1.0289653167251247 1.0105540114372444 0.011564300516799797 0.061675563468378644 927.3440994696508 875980.7834111131 0.008152577582738041 0.02536062961343251 1.6296863900119108e-06 5.787895961357543 -0.018411305287880264 ALTT(ph)PTHYKLT(ph)PR ddPTM_A549_MK2206_60min_R1 3 ALTTPTHYKLTPR 13 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 2 ALT(0.124)T(0.75)PT(0.135)HY(0.056)KLT(0.936)PR;ALT(0.119)T(0.856)PT(0.029)HY(0.006)KLT(0.991)PR;ALT(0.21)T(0.789)PT(0.52)HYKLT(0.48)PR 66.82600000000001 0.0023141 29551500.0 3984.5999999999995 4588.48 4059.53 3738.29 5726.6 4843.75 4459.4800000000005 4694.55 7340.27 5869.56 7120.26 True False 4657.103065883111 4822.014033017315 4635.232396695126 4654.171217818214 4884.224725981148 5356.312409978974 5269.709791555894 5360.016838956406 5677.710565002553 4543.622319413541 5352.102932821097 0.8701445253087368 0.9009568936813457 0.8660581559951225 0.8695967316467506 0.9125804916847274 1.0007865090060326 0.9846054640018342 1.001478653574986 1.060837326237638 0.848941505132562 1.0 12.385890147136703 -7.290165801825343 1.4377955750588771 1.0257096435388453 0.8750056504366942 0.32624543608275713 0.05723624646653017 0.10288788066852819 0.4164650311677074 0.004328752847764485 0.008466253407516063 5.1266562482906716e-08 7.290165801825343 -0.1507039931021511 ALTT(ph)PTHYKLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 ALTTPTHYKLTPR 13 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 2 ALT(0.401)T(0.523)PT(0.091)HY(0.009)KLT(0.976)PR;ALT(0.464)T(0.533)PT(0.063)HY(0.008)KLT(0.932)PR 56.215 0.0043047 33547000.0 5625.1 5969.9 5456.200000000001 5793.4 6388.1 5606.0 5996.700000000001 5384.700000000001 6020.700000000001 6282.9 6561.1 True False 6196.15601102025 6473.004424365871 5826.490542795973 6151.245160233967 5939.421893748617 5560.346594663379 6224.907700020154 5277.2979342845665 5767.670916548237 5886.196621753581 5754.126294239696 1.076819606344591 1.1249326297974769 1.012576061917292 1.0690146245819832 1.0322022128180286 0.9663233495986515 1.0818163143641364 0.9171327955675096 1.0023538972931652 1.0229522816776018 1.0 12.490381171028432 -6.24473302942508 0.7085976371967776 0.9973841595633315 1.1085890752213026 0.3772935110588954 0.043984925628043035 0.7936783390672297 0.5490932925358537 0.006720705712402393 0.05420133490989684 5.692027250224806e-07 6.24473302942508 0.11120491565797108 ALTT(ph)PTHYKLT(ph)PRPATR ddPTM_A549_PD325901_60min_R1 1 ALTTPTHYKLTPRPATR 17 2 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 2 ALT(0.139)T(0.803)PT(0.059)HYKLT(0.969)PRPAT(0.029)R 64.52199999999999 0.00078919 20148000.0 2893.8 3272.7 3279.1 3988.0 3878.0 4736.0 4196.2 3971.0 4274.2 3705.7 3846.1 True False 3187.5764456970346 3548.50191454165 3501.639444830153 4234.329702594859 3605.622658373717 4697.431586215794 4355.8886872487465 3891.7952898107656 4094.5702379308805 3471.7214695812813 3373.0540824366776 0.9450119588341569 1.0520145327697294 1.0381213461897967 1.2553399972573223 1.068948961461369 1.3926345298390213 1.2913782527026882 1.1537897687662784 1.2139058959211775 1.0292516469446369 1.0 11.719839734900036 -6.067264988972207 8.462292770623067 1.1472859545929208 1.0098735670615537 0.26779924518520415 0.11475834657215164 0.46497743706331823 54.996969857933244 0.018280650567327406 0.048713386504024014 8.565150748154337e-07 6.067264988972207 -0.1374123875313671 ALTTPTHYKLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 ALTTPTHYKLTPR 13 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALT(0.001)T(0.006)PT(0.177)HYKLT(0.817)PR;ALT(0.003)T(0.023)PT(0.148)HYKLT(0.827)PR 91.20700000000001 0.00010264 7158100.0 2300.2 2491.8 2177.18 2646.9 3713.8 2517.1 2118.49 2599.3999999999996 3740.5 3053.8 3463.1 True False 2688.4175255092946 2618.6219766616723 2485.9368620103055 3295.3906188238584 3167.5049396411123 2783.4578512842454 2503.3922108212714 2967.872910328632 2893.2827223510913 2363.9444590437906 2603.1166933023164 1.032768731584893 1.0059564303817996 0.9549847951136772 1.2659404118542694 1.2168125031778012 1.0692789372239582 0.9616903526693095 1.1401228834515234 1.1114686981937294 0.9081208172980092 1.0 11.346024271423326 -10.854802010599853 1.0750830134666443 0.9994592225188677 1.086740353625056 0.17783416685428888 0.0974951548126624 1.0568729830896157 2.1472722449831974 0.0698814815911175 0.016614644887497112 1.3970050929832577e-11 10.854802010599853 0.08728113110618829 ALTTPTHYKLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 ALTTPTHYKLTPR 13 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALTTPTHYKLT(1)PR;ALTT(0.001)PT(0.001)HYKLT(0.997)PR 133.66 1.6425e-08 11444400.0 2104.31 2428.6000000000004 2372.1 2492.6000000000004 3240.2 3455.5 2543.9 2585.8 2788.3 3325.8 2937.8 True False 2317.938002088855 2633.2666451724413 2533.0849705960813 2646.562240894672 3012.619530083165 3427.3595536673743 2640.709506575493 2534.2241904791413 2671.117447574441 3115.8084204154197 2576.4692242485817 0.8996567784600157 1.0220446727596462 0.9831613538232139 1.0272050665253076 1.169282171791431 1.330254412282744 1.024933456112074 0.9836035170256067 1.0367356312410303 1.2093326755432658 1.0 11.33117964436082 -4.914382184523173 1.2164269405852683 1.0471513499023375 0.7195881427079995 0.13535107171266247 0.10950585658317184 4.919264843396948 3.4491098310366564 0.015481749550951726 2.4805866733923647 1.2179173448472446e-05 4.914382184523173 -0.32756320719433796 ALTVPELTQQMFDAK ddPTM_A549_PD325901_60min_R1 2 ALTVPELTQQMFDAK 15 0 A0A0B4J269;Q13509;Q13509-2;P68371;P04350 A0A0B4J269;P68371 TUBB3;TUBB4B;TUBB4A Tubulin beta-3 chain;Tubulin beta-4B chain;Tubulin beta-4A chain 0 ; 91.54899999999999 1.7766e-05 3913400.0 3649.7 3676.6000000000004 3860.1 3789.3 5028.700000000001 4742.7 4165.6 4278.2 4787.4 4096.1 4533.8 False True 4020.2148572328665 3986.4399850288232 4122.069598666974 4023.356454875299 4675.501460073212 4704.077023637176 4324.124187503785 4192.867944817024 4586.202226631957 3837.471546955202 3976.1713421261575 1.0110768654861735 1.0025825453732018 1.0366931512721989 1.0118669716893816 1.175880277224951 1.1830669804892737 1.0875095199472888 1.0544988090415122 1.1534216793030858 0.965117248921977 1.0 11.957164211861468 -6.639736790073006 18.765974141161422 1.088479806053839 1.016080783515798 0.22870243711788196 0.06442729475446943 2.1142771671230842 333.2402497220756 0.009955519530944363 0.020724097362224463 2.2922564842897704e-07 6.639736790073006 -0.07239902253804109 ALVAT(ph)PGK ddPTM_A549_MK2206_60min_R1 2 ALVATPGK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 ALVAT(1)PGK;ALVAT(1)PGK 77.37899999999999 0.0047453999999999994 195031000.0 17300.699999999997 18352.1 18816.6 17011.0 24202.0 19647.300000000003 17795.5 18623.6 26070.0 24291.0 26087.0 True False 20220.635198495194 19286.14350184311 21485.07682309367 21178.695763652806 20641.917860195532 21726.36424517777 21028.71200131695 21263.552332382977 20165.18662523537 18803.64622916781 19608.87793542707 1.0311979739525468 0.9835414124843482 1.0956810937293306 1.0800564842820286 1.0526822558725852 1.1079861028623708 1.0724077160644 1.0843839409070128 1.028370245948812 0.9589353501556324 1.0 14.25921936315143 -9.04606986932916 2.4477988143716964 1.0105620570542557 1.063741134156795 0.39483548417516856 0.03618684479874404 0.23377101741635803 2.860519770812247 0.0066100704027551435 0.00653451470029903 8.993528819309052e-10 9.04606986932916 0.05317907710253933 ALVAT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 ALVATPGK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 ALVAT(1)PGK;ALVAT(1)PGK 85.73100000000001 0.003098 251020000.0 9680.1 8654.3 8932.9 8757.400000000001 10354.3 9121.0 9924.3 10408.3 7905.599999999999 9192.2 10876.7 True False 10662.816625887015 9383.628233268495 9539.140311891453 9298.324708501565 9627.049688395811 9046.721600057908 10301.974667285336 10200.698291346609 7573.355124464553 8611.802923249334 9538.934853082084 1.1178204684395971 0.9837186622819414 1.000021538967666 0.9747759945647624 1.0092373872629246 0.9483995581681597 1.0799921402080557 1.0693749824751875 0.79394138246133 0.9028055077309612 1.0 13.21961246410373 -8.742418585837523 24.992954509244647 0.9026945223591311 1.0182055821183078 0.420055678956916 0.06467690253453497 229.9264475431053 302118.76944494277 0.014314144984242537 0.01621790120188016 1.8095951106540213e-09 8.742418585837523 0.11551105975917675 ALVAT(ph)PGKK ddPTM_A549_MK2206_60min_R1 4 ALVATPGKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK 120.68 0.00040752 3686091000.0 29666.4 33073.6 34994.5 30825.6 42062.9 32292.2 31891.3 32007.1 50088.799999999996 46123.6 44865.9 True False 34673.36304615642 34756.90497123261 39957.24630835286 38377.87338381375 35875.503130386714 35709.33917017247 37685.53640232639 36544.20444263275 38743.76677537745 35704.2467257686 33724.458794153325 1.0281369749413918 1.0306141659197887 1.1848150492864273 1.13798337337491 1.063782916409805 1.058855811093498 1.1174541490005996 1.083611294274299 1.1488328696943924 1.0587048095775078 1.0 15.041507670721328 -10.996611848119006 1.2735209408760948 0.9999943195759625 1.1008496218002037 0.16631994919876858 0.050083560638649945 0.4071565752948488 1.1751606205285672 0.03541969754774801 0.008085019711972877 1.0078320190700955e-11 10.996611848119006 0.10085530222424122 ALVAT(ph)PGKK ddPTM_A549_PD325901_60min_R1 4 ALVATPGKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK 110.38 0.00060618 5519214000.0 33475.4 32282.0 36445.8 36012.4 40639.4 36386.2 37947.1 40802.6 43326.0 38951.4 41942.399999999994 True False 36873.797964713005 35002.517433688845 38919.23115439933 38236.80415790551 37785.02874231892 36089.88285100616 39391.19765594988 39988.76013397951 41505.15889022351 36492.001956512475 36783.75069477966 1.002448017622796 0.9515755400836923 1.0580549949171643 1.039502591108309 1.0272206620756965 0.9811365662645171 1.0708858371405903 1.0871311211788608 1.1283558121796946 0.9920685429637661 1.0 15.166780972754285 -7.779059482666231 24.771517198749287 1.065263338387211 1.0116440402374645 0.19247361488141235 0.04462313078712508 279.8341878430176 393408.0019743937 0.008352727730439075 0.01155554062309551 1.6631848384867016e-08 7.779059482666231 -0.05361929814974653 ALVATPGK ddPTM_A549_PD325901_60min_R1 2 ALVATPGK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 129.4 0.0029575 7513400.0 8581.3 8218.8 8178.6 8433.4 9837.0 9938.2 8248.5 9355.099999999999 10975.2 9251.900000000001 9962.1 False True 9452.467258780827 8911.427119881111 8733.648977917082 8954.311964358943 9146.083055807701 9857.266594199715 8562.401181252395 9168.505191566028 10513.950511286088 8667.733455060868 8736.824854954999 1.0819110392741773 1.0199846360462506 0.9996364952839686 1.0248931520334414 1.0468428986098532 1.128243584808647 0.9800358051582456 1.0494092927096055 1.2034063502283912 0.9920919325909405 1.0 13.092893354058116 -8.549624236332889 24.993526678667195 1.0976506191025652 1.039060261013575 0.0 0.06558525638301353 381.4748616427014 356484.7150455081 0.013397725915055557 0.015191761582296424 2.8208225298315063e-09 8.549624236332889 -0.05859035808899016 ALVATPGKK ddPTM_A549_MK2206_60min_R1 1 ALVATPGKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 69.954 0.004552399999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALVAYYQK ddPTM_A549_PD325901_60min_R1 1 ALVAYYQK 8 0 P62249;M0R210;M0R1M5;M0R3H0;M0QX76 P62249 RPS16 40S ribosomal protein S16 0 117.7 0.0034859 5065000.0 4288.4 5399.0 5360.6 5524.2 5783.4 5928.8 5842.3 5893.6 5659.6 5582.9 6202.4 False True 4723.755211046775 5853.992677792145 5724.402551906476 5865.417287631528 5377.193935646866 5880.517818487373 6064.631923529231 5776.04752456024 5421.746693789157 5230.394741216328 5439.54412025305 0.8684101289773202 1.0761917815862507 1.0523680708081424 1.078292069696213 0.9885376084414802 1.0810681352123694 1.1149154762710338 1.061862427598351 0.996728140066439 0.9615502008232645 1.0 12.4092700311727 -8.773445494598638 23.928523583229584 0.9984549457660529 1.0452103402911421 0.11438273217977013 0.06350719914261525 217.36163485329013 433206.24401749705 0.010270865157562932 0.010980249375121357 1.6848238645021714e-09 8.773445494598638 0.046755394525089256 ALVEFESNPEET(ph)REPGSPPSVQR ddPTM_A549_PD325901_60min_R1 1 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFESNPEET(0.857)REPGS(0.142)PPS(0.001)VQR 142.21 2.8836999999999997e-27 8032000.0 437.06 612.44 508.54 754.8 678.63 551.07 464.47 500.6 601.73 643.05 792.69 True False 481.43000945343346 664.0524681583669 543.0525824994438 801.4222817248242 630.9653699464044 546.5822686266764 482.14566001773613 490.6151402868974 576.4413806724413 602.4477132564006 695.1941552759235 0.6925115894600022 0.9552043312199647 0.7811523994817038 1.1528035378932933 0.9076102915393087 0.7862296661710816 0.693541014921755 0.705723914051279 0.8291804185891793 0.8665891516554656 1.0 9.441272142770124 -10.559917421321789 1.0294957080707372 0.993360503418094 0.8398347750173608 0.04449818319925736 0.13446494902444564 0.7141437209722291 1.429451649261802 0.07175673437144807 0.0237041378663839 2.7547524543871463e-11 10.559917421321789 -0.1535257284007332 ALVEFESNPEETREPGS(ph)PPSVQR ddPTM_A549_MK2206_60min_R1 6 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFESNPEETREPGS(1)PPSVQR;ALVEFESNPEETREPGS(1)PPSVQR;ALVEFESNPEETREPGS(1)PPSVQR;ALVEFESNPEETREPGS(1)PPSVQR;ALVEFES(0.01)NPEET(0.17)REPGS(0.786)PPS(0.034)VQR;ALVEFESNPEETREPGS(0.979)PPS(0.02)VQR 364.53 4.7087999999999974e-269 2598575700.0 58613.2 66550.0 62196.200000000004 55681.8 80645.7 65906.5 57982.100000000006 61968.6 88947.1 88268.79999999999 88543.2 True False 68505.67520484359 69937.11074196726 71016.55639725015 69323.84349965099 68782.82436071293 72880.68208480597 68516.69703754105 70752.83882087837 68800.72386933153 68328.81677465612 66555.47977199778 1.0293018011368362 1.0508092043142667 1.0670279388043613 1.0415948279110439 1.0334659835124842 1.095036536953482 1.02946740482169 1.0630655667010391 1.0337349246827667 1.026644492816119 1.0 16.022269833281303 -9.738894900114918 0.7110222946886341 1.0027770250093488 1.05200786629716 0.314801582834186 0.019988324717754153 0.34814136453121314 0.37219355949499927 0.0077119229200300074 0.003992986884274683 1.8243371410975893e-10 9.738894900114918 0.04923084128781108 ALVEFESNPEETREPGS(ph)PPSVQR ddPTM_A549_PD325901_60min_R1 8 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFESNPEETREPGS(1)PPSVQR;ALVEFESNPEETREPGS(1)PPSVQR;ALVEFESNPEET(0.205)REPGS(0.771)PPS(0.024)VQR;ALVEFESNPEET(0.001)REPGS(0.999)PPSVQR;ALVEFESNPEETREPGS(0.999)PPS(0.001)VQR;ALVEFESNPEETREPGS(0.999)PPSVQR;ALVEFESNPEET(0.002)REPGS(0.995)PPS(0.003)VQR;ALVEFES(0.001)NPEET(0.02)REPGS(0.965)PPS(0.015)VQR 255.75 7.207399999999999e-111 4748180800.0 57017.56 62411.54 60154.469999999994 61255.99 71144.14 68409.81999999999 67043.81 68585.06 68207.32 70508.96999999999 76127.41 True False 62805.94071709079 67671.17950911868 64236.91407241378 65039.63337985293 66147.22104035896 67852.71310712349 69595.19887733048 67217.07717436137 65340.8035377445 66057.02160106387 66764.22118141253 0.9407125494122629 1.013584496481158 0.9621457861070299 0.9741689819630558 0.9907585211040348 1.016303521653511 1.042402616937979 1.0067829143354843 0.9786799333762869 0.9894075064782519 1.0 16.026787551819908 -6.856746177723453 4.473193788057291 0.9973253336745752 0.974836951909466 0.2744811659652354 0.022832436684771272 0.3179919195158024 11.305018290155257 0.003525316654279698 0.006875833185290265 1.390765222836629e-07 6.856746177723453 -0.022488381765109255 ALVILAK ddPTM_A549_MK2206_60min_R1 1 ALVILAK 7 0 Q99497;K7ELW0 Q99497 PARK7 Protein deglycase DJ-1 0 126.05 0.016421 1327200.0 448.59 666.15 620.23 778.68 964.3 648.95 931.37 582.43 1126.8 839.34 806.45 False True 524.3010250274822 700.0541896432994 708.1879403286143 969.456634956274 822.4527474004859 717.6214582618535 1100.5878731514467 664.9912361170675 871.5815991298514 649.7325110530534 606.1862081122846 0.8649174428765052 1.1548500778718271 1.168267985729949 1.5992720091327126 1.3567658524625192 1.1838300651817661 1.8155937209108914 1.097008191901803 1.4378116616081231 1.071836512210292 1.0 9.243617218217715 -5.299299448132772 1.8928461440730637 1.2767491529879083 0.7615124448127708 0.23112709951529542 0.23268700663515202 0.9708443678010027 3.7833350595882473 0.03488572168777461 0.8525515000292256 5.019963412759611e-06 5.299299448132772 -0.5152367081751374 ALVILAK ddPTM_A549_PD325901_60min_R1 1 ALVILAK 7 0 Q99497;K7ELW0 Q99497 PARK7 Protein deglycase DJ-1 0 140.79 0.014888 3105400.0 1085.2 1355.4 1179.7 1196.3 1664.6 1294.1 1164.8 1488.3 1590.2 1253.7 1348.8 False True 1195.3687051179843 1469.624314776714 1259.7615361123887 1270.1927340055736 1547.684238558248 1283.561278657487 1209.1271014030176 1458.6146889512374 1523.3694240694613 1174.54116804222 1182.9061507476636 1.0105355394106657 1.2423845406905936 1.064971667715269 1.0737899479199935 1.3083744957958194 1.0850913894109044 1.0221665519608474 1.233077271624051 1.2878193448454094 0.9929284477047006 1.0 10.208119902530994 ALVLDCHYPEDEVGQEDEAESDIFS(ph)IR ddPTM_A549_PD325901_60min_R1 2 ALVLDCHYPEDEVGQEDEAESDIFSIR 27 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial 1 ALVLDCHY(0.001)PEDEVGQEDEAES(0.228)DIFS(0.771)IR;ALVLDCHYPEDEVGQEDEAES(0.222)DIFS(0.778)IR 108.52 3.7491e-13 20151300.0 2148.48 1995.86 1740.6399999999999 2332.6800000000003 2420.1499999999996 2346.19 2396.2 2555.4 1945.9699999999998 1822.67 1921.6399999999999 True False 2366.592107972619 2164.058126671278 1858.7702977186289 2476.7643456993437 2250.1670130642465 2327.0834065168146 2487.388702250952 2504.430542327481 1864.1876481929626 1707.5863051411927 1685.2904622796125 1.404263633445977 1.2840861412958209 1.1029376474393373 1.469636481742822 1.3351805302574087 1.38082037405533 1.4759406511364097 1.4860527596767246 1.1061521381135477 1.0132296736738318 1.0 10.718781548102738 -8.891486055248205 5.343626121045082 1.0459293793203435 1.361633095302951 0.6632190671217064 0.10448517783297559 0.09762508623404952 4.184836727745371 0.019512054906645624 0.02062420208017115 1.2838489928892336e-09 8.891486055248205 0.3157037159826075 ALVLPS(ph)PRPYVR ddPTM_A549_MK2206_60min_R1 2 ALVLPSPRPYVR 12 1 P18858;P18858-3;F5GZ28 P18858 LIG1 DNA ligase 1;DNA ligase 1 ALVLPS(0.991)PRPY(0.009)VR;ALVLPS(1)PRPYVR 79.46600000000001 0.00025119 4683300.0 1112.33 980.53 1210.92 1145.2 1914.8700000000001 1178.34 1190.49 926.29 1424.5 1536.67 1757.8700000000001 True False 1300.0641101424894 1030.4347888177497 1382.646664467576 1425.7740514099821 1633.1951596129513 1303.0311566812113 1406.7866230478392 1057.5944441441525 1101.8530244590638 1189.5351797363348 1321.3423642561118 0.98389648686879 0.7798393638864844 1.0463954701444673 1.0790345409175337 1.2360121069246168 0.9861419658748252 1.064664738755902 0.8003939575036302 0.8338891223542841 0.9002475148868918 1.0 10.367788606825814 -8.236353534136502 24.6989101357789 0.9102796410087247 1.0252068272813306 0.25742474628922785 0.11234716900076588 953.7040726041682 938994.8665469637 0.020238290447339474 0.026121739424227734 5.802918430160677e-09 8.236353534136502 0.1149271862726059 ALVLPS(ph)PRPYVR ddPTM_A549_PD325901_60min_R1 2 ALVLPSPRPYVR 12 1 P18858;P18858-3;F5GZ28 P18858 LIG1 DNA ligase 1;DNA ligase 1 ALVLPS(0.999)PRPY(0.001)VR;ALVLPS(0.999)PRPY(0.001)VR 62.042 0.0021771 13020400.0 712.95 695.63 888.48 731.83 989.28 830.19 826.87 675.99 785.27 793.14 949.1 True False 785.3281591539504 754.2531814136976 948.7775956642664 777.0334769934792 919.7963856307251 823.4292078886172 858.3369903306258 662.5068491461043 752.2678327499842 743.061005041881 832.3667168406051 0.9434881804678618 0.906154902825282 1.1398552782907025 0.9335230028692726 1.1050374396539722 0.9892625344440586 1.0312005189114186 0.7959314515370893 0.9037697177577566 0.8927086943868927 1.0 9.701075468148058 ALVVPEPEPDS(ph)DSNQER ddPTM_A549_MK2206_60min_R1 3 ALVVPEPEPDSDSNQER 17 0 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.983)DS(0.017)NQER;ALVVPEPEPDS(0.684)DS(0.316)NQER;ALVVPEPEPDS(0.876)DS(0.124)NQER 196.95 4.489499999999999e-48 15127200.0 3327.8 3741.6000000000004 3746.3 2731.2 4216.5 4056.1 2958.2 3747.3 5112.7 5131.5 4881.9 True False 3889.451283101399 3932.031458334264 4277.581672690914 3400.3441226082277 3596.2584355637737 4485.313809778725 3495.666648438977 4278.491250624948 3954.6816133042144 3972.2905860184696 3669.589496414361 1.0599145454557983 1.0715180709385452 1.165683975515691 0.9266279309799587 0.9800165492837167 1.222293069609401 0.952604276814797 1.165931844639723 1.077690465696074 1.0824890876486006 1.0 11.841402967727463 -10.658964751765133 1.0329040989232112 1.0017155875567036 1.0688472668933175 0.0 0.09062943626409059 1.0667776946008758 2.101513215741692 0.04901436800896585 0.014495369092030084 2.1929829151390347e-11 10.658964751765133 0.0671316793366139 ALVVPEPEPDS(ph)DSNQER ddPTM_A549_PD325901_60min_R1 1 ALVVPEPEPDSDSNQER 17 0 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.998)DS(0.002)NQER 166.48 3.5544000000000004e-23 14068000.0 3391.8 3435.5 3418.1 2752.1 3511.7 3463.2 3077.0 3638.3 3583.9 3409.4 3400.4 True False 3736.1330390888115 3725.021641888297 3650.072820705057 2922.0909665274107 3265.050306707318 3434.996847420301 3194.096918799007 3565.7312523088654 3433.281146347969 3194.1299021481545 2982.1723569115934 1.2528226379772487 1.2490966973304036 1.2239644071025984 0.9798531462324986 1.094856338246217 1.1518438360744727 1.0710638207735543 1.1956824842953138 1.151268516855127 1.0710748809488897 1.0 11.542147926346413 -14.99999999999807 0.023699429909017616 9.256926408906834e-15 1.9008106648501357 0.3313893715005918 0.07435393000316973 1392.8084878925704 2.5602928151192286 144.80841993165478 72.300342704057 1.000000000004442e-15 14.99999999999807 1.9008106648501264 ALVVPEPEPDSDS(ph)NQER ddPTM_A549_MK2206_60min_R1 3 ALVVPEPEPDSDSNQER 17 0 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.007)DS(0.993)NQER;ALVVPEPEPDS(0.038)DS(0.962)NQER;ALVVPEPEPDS(0.202)DS(0.798)NQER 319.45 1.8538999999999996e-172 88073000.0 10330.8 11148.7 10832.0 9449.8 15623.7 11126.1 11628.8 12380.2 17380.0 16530.3 15518.899999999998 True False 12074.386476189651 11716.121210052159 12368.140479563299 11765.001424217638 13325.474426590237 12303.456517092556 13741.602434374669 14135.131262772396 13443.457750156915 12796.09374920805 11665.128830149084 1.0350838513658607 1.004371351628049 1.0602660853258001 1.00856163661137 1.1423340985441937 1.054721014764422 1.1780069156937931 1.2117424049565122 1.1524482880473343 1.0969526299731842 1.0 13.509914620141245 -6.746110350672292 24.97506355887674 1.0951721719956014 1.0278204355336251 0.31267700091554684 0.05929776272402562 376.96956202929806 614179.9206856969 0.011137059551725208 0.023116134284313902 1.7942776576428667e-07 6.746110350672292 -0.06735173646197623 ALVVPEPEPDSDS(ph)NQER ddPTM_A549_PD325901_60min_R1 2 ALVVPEPEPDSDSNQER 17 0 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.034)DS(0.966)NQER;ALVVPEPEPDS(0.027)DS(0.973)NQER 365.93 1.0475999999999995e-245 247900000.0 21279.8 21771.4 21909.7 22779.4 27510.4 24769.0 22994.0 25568.0 26281.7 25760.6 27846.6 True False 23440.1096306392 23606.152284734948 23396.623995729078 24186.43180222903 25578.164409727775 24567.28947613577 23869.04925279961 25058.026182292022 25177.17154607367 24134.071319668485 24421.64473414139 0.9598088042723015 0.9666077998315 0.9580281856700938 0.9903686694949119 1.0473563385339715 1.0059637564783166 0.9773727164014775 1.0260580912988622 1.0309367702362837 0.9882246499937459 1.0 14.575872744898719 -6.484792965814525 4.827637535504643 1.0143499813792607 0.9630644146996576 0.5628580510797527 0.018837192181944726 0.10628504433961672 5.904257393440675 0.002667490735500055 0.0061754305028665695 3.2749677991594374e-07 6.484792965814525 -0.051285566679603045 ALVVPEPEPDSDS(ph)NQERK ddPTM_A549_MK2206_60min_R1 2 ALVVPEPEPDSDSNQERK 18 1 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.016)DS(0.984)NQERK;ALVVPEPEPDS(0.166)DS(0.834)NQERK 108.18 1.5573e-09 10675200.0 3417.2000000000003 3582.2 3648.2 3710.4 4521.700000000001 3758.4 3749.0 3248.6000000000004 5267.1 5227.6 6073.2 True False 3993.939817481248 3764.5186791867095 4165.569617572271 4619.448166566184 3856.563919859772 4156.111393375995 4430.144772157977 3709.0989984202506 4074.110259830351 4046.6815292741226 4565.056828206988 0.8748937784964975 0.8246378568446638 0.9124901998664444 1.011914712216312 0.8448008568109129 0.9104183255060126 0.9704467959269633 0.8124978807497275 0.8924555406751715 0.8864471312317777 1.0 12.15641710440326 -10.578433429285166 0.8642009298292572 1.0003400063499333 0.8961010458734541 0.0 0.06505909937107376 0.5806343338060865 0.7734507167159357 0.03786360205731435 0.01040814113042778 2.639772928250353e-11 10.578433429285166 -0.10423896047647918 ALWY(ph)KLDK ddPTM_A549_MK2206_60min_R1 1 ALWYKLDK 8 1 A0A2R8YFA9;O94851-5;O94851-6;O94851-4;O94851-3;O94851;E9PKW5;E9PJB0;E9PRE0;E9PL42;E9PNC3;E9PKI3 A0A2R8YFA9 MICAL2 Protein-methionine sulfoxide oxidase MICAL2 1 ALWY(1)KLDK 50.909 0.025452000000000002 3754400.0 1202.5 1087.9 1281.7 893.97 1793.1 1180.0 1270.3 1288.3 2060.7 1687.3 1784.0 True False 1405.4526016976465 1143.2694632034008 1463.4643327784602 1112.9926901318381 1529.3373653052067 1304.8668167793937 1501.097066970465 1470.9204702532818 1593.9547402617002 1306.1377581192573 1340.9835641047998 1.04807593420124 0.8525603846357453 1.091336517428105 0.8299823502123521 1.1404594405496284 0.9730669724132551 1.1194000487042153 1.0968967179215383 1.188645993081784 0.9740147404350892 1.0 10.38907583948105 -6.784411858293398 24.999997817517208 1.0879704088872606 0.9578400859465145 0.23660571780368467 0.09595498320607766 220.63253223077228 240104.71556544153 0.013756365553986004 0.026008978368230382 1.642813040958992e-07 6.784411858293398 -0.1301303229407461 ALWY(ph)KLDK ddPTM_A549_PD325901_60min_R1 1 ALWYKLDK 8 1 A0A2R8YFA9;O94851-5;O94851-6;O94851-4;O94851-3;O94851;E9PKW5;E9PJB0;E9PRE0;E9PL42;E9PNC3;E9PKI3 A0A2R8YFA9 MICAL2 Protein-methionine sulfoxide oxidase MICAL2 1 ALWY(1)KLDK 65.06 0.0076637 3752600.0 1669.5 1500.0 1763.0 1601.2 1890.8 2003.8 1737.2 1841.7 2296.8 1994.7 2170.0 True False 1838.986410979059 1626.4102642504577 1882.6477817802324 1700.1024874109542 1757.9967309058843 1987.481717157773 1803.310096632315 1804.965848714299 2200.273483337151 1868.7543015823678 1903.1037567633691 0.966309064570733 0.8546093498425502 0.9892512560545168 0.8933314756849298 0.9237524358081926 1.0443370258161364 0.9475626802919173 0.948432707517758 1.156150039385757 0.9819508237220761 1.0 10.894138503808117 -8.724004716602387 18.660121783322193 1.0737371169094307 0.945185140914684 0.3064502714449747 0.06341870570902898 8.345455663454839 4159.5798937704285 0.011817454978590844 0.013398337624728288 1.88797084490727e-09 8.724004716602387 -0.12855197599474677 ALYDYAGQEADELS(ph)FR ddPTM_A549_MK2206_60min_R1 2 ALYDYAGQEADELSFR 16 0 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 ALYDYAGQEADELS(1)FR;ALYDYAGQEADELS(1)FR 155.22 3.5237e-20 4248400.0 1949.45 2037.2399999999998 1759.65 1710.27 2433.2 2305.7 2313.8 1928.92 2739.8 2356.4900000000002 3166.9 True False 2278.469500523474 2140.9268142444125 2009.1948296587477 2129.2862267769387 2075.27950324055 2549.6876436002103 2734.1875096876815 2202.3503170697504 2119.2396745615606 1824.157272346616 2380.471328006442 0.9571505750634725 0.8993709729061768 0.844032358642763 0.8944809381762806 0.8717935304763873 1.0710852147652123 1.148590817927416 0.9251740574057401 0.8902605335458279 0.7663008795297196 1.0 11.217031536874115 ALYDYAGQEADELS(ph)FR ddPTM_A549_PD325901_60min_R1 2 ALYDYAGQEADELSFR 16 0 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 ALYDYAGQEADELS(1)FR;ALYDYAGQEADELS(1)FR 177.58 1.8377999999999998e-28 13512000.0 2993.6000000000004 2981.1 2738.3 3543.2999999999997 3408.1 3316.2999999999997 3442.8 3736.2 2995.9 3231.1 3409.4 True False 3297.508068228158 3232.327759171362 2924.1375047355723 3762.161593581836 3168.7268133067228 3289.2931523157604 3573.8176379724473 3661.678560007803 2869.992741522888 3027.087794577025 2990.065413967293 1.102821380704492 1.0810224231457963 0.9779510144079939 1.2582204977884102 1.0597516691457187 1.1000739772951806 1.1952305863538342 1.2246148672544916 0.959842794112959 1.0123817962098058 1.0 11.54596133141788 -8.784112456003356 24.999093337835134 0.9810368538500579 1.1223769928607352 0.38076207114751937 0.07590415920530318 159.71341392524099 176097.48529904548 0.012950226676950944 0.01379121289935033 1.6439459855177784e-09 8.784112456003356 0.14134013901067732 ALYEAGER ddPTM_A549_MK2206_60min_R1 1 ALYEAGER 8 0 P04083 P04083 ANXA1 Annexin A1 0 98.009 0.0021577 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ALYEAGER ddPTM_A549_PD325901_60min_R1 2 ALYEAGER 8 0 P04083 P04083 ANXA1 Annexin A1 0 ; 120.46 0.0033265 50761000.0 23496.0 24748.0 23086.0 24013.0 27201.0 26213.0 25060.0 26325.0 27605.0 27298.0 29428.0 False True 25881.296623158996 26833.600813113557 24652.754787395606 25496.228472520146 25290.49559835572 25999.53001889246 26013.67201335819 25799.927223437022 26444.857848973385 25574.399621294186 25808.54255946195 1.0028189915617833 1.03971778922773 0.9552168523502074 0.9878988096200224 0.9799273066306372 1.0074001644606814 1.0079481223483904 0.9996661827763006 1.0246552197996222 0.9909276962219659 1.0 14.655561052496058 -7.447479730491332 8.642413239477321 1.0104742616658393 0.9933042497995064 0.04599333621148416 0.020713843064802295 0.6003495472713891 64.56992989903686 0.003091060838727817 0.004941227660920997 3.5687840521954385e-08 7.447479730491332 -0.017170011866332935 ALYESVFGSGEICGPT(ph)SPKR ddPTM_A549_MK2206_60min_R1 1 ALYESVFGSGEICGPTSPKR 20 1 A0A2U3U043 A0A2U3U043 1 ALYESVFGS(0.004)GEICGPT(0.552)S(0.444)PKR 61.222 0.0014405 2652100.0 2600.9 3144.0 3007.6 2922.3 4088.5 2746.5 3040.7 2765.1 4625.8 3808.7 4205.2 True False 3039.868334100132 3304.016170890238 3434.1229049422604 3638.2636311870347 3487.087066003199 3037.1328070208497 3593.1558305416784 3157.0613927635995 3578.0636858846856 2948.312024742968 3160.932782384249 0.9616997713590101 1.045266191455695 1.086427058519083 1.1510094904462793 1.1031829229133232 0.9608343536903626 1.1367390823892842 0.9987752382327696 1.1319644966274165 0.9327348057427199 1.0 11.626134641147148 -11.160131536959163 1.558737314435356 1.0000926725376083 1.0747446114178179 0.18672003340903787 0.06829710070074141 0.6124328510714455 2.6749580391146917 0.04645383182601704 0.009920563535191372 6.916214643137768e-12 11.160131536959163 0.0746519388802096 ALYESVFGSGEICGPT(ph)SPKR ddPTM_A549_PD325901_60min_R1 1 ALYESVFGSGEICGPTSPKR 20 1 A0A2U3U043 A0A2U3U043 1 ALYESVFGSGEICGPT(0.578)S(0.422)PKR 110.44 2.9156e-10 4465700.0 4142.6 4399.2 4257.0 3952.2 4269.9 3708.5 4465.7 4510.3 4094.3 4326.6 4345.1 True False 4563.153702379064 4769.93602299374 4545.905619420563 4196.3184179025575 3969.996954355321 3678.299205549257 4635.644657224808 4420.338528238101 3922.2308093117827 4053.4177376178254 3810.6802458583024 1.1974643391658482 1.2517282257355546 1.1929380913975536 1.1011992996429947 1.041807944571097 0.9652605225922783 1.216487440074021 1.159986732826092 1.0292731366203502 1.0636992547520474 1.0 11.895832841364214 -2.000000000000002 0.1670545458726366 0.9817143589101183 2.0196160640339427 0.3499722067458165 0.07487956450209472 35.97064559131417 0.3611880330517914 0.09986459973203023 9.381863801091066 0.009999999999999948 2.000000000000002 1.0379017051238244 ALYESVFGSGEICGPTS(ph)PKR ddPTM_A549_PD325901_60min_R1 1 ALYESVFGSGEICGPTSPKR 20 1 A0A2U3U043 A0A2U3U043 1 ALYESVFGSGEICGPT(0.149)S(0.851)PKR 130.71 3.7325e-17 4358100.0 4538.2 4844.8 5782.6 4993.7 4659.6 4729.2 4479.0 6273.6 5354.9 5496.0 4659.9 True False 4998.914723153734 5253.088298827078 6175.04200959862 5302.14950748444 4332.325770747337 4690.6869631612635 4649.450796002845 6148.4681264560095 5129.852175166368 5148.981622046771 4086.7618415399174 1.223196975253667 1.2853913446660943 1.510986509375801 1.2973962548026916 1.0600876534353882 1.147775951973209 1.1376857708573747 1.504484079292281 1.2552363886302236 1.2599172209424865 1.0 11.996742456564684 -10.455941749568106 0.8001755638866394 0.9994149047159498 1.2693384909902354 0.010603078341106076 0.15246209327106863 0.5871442618169643 0.6805701673350644 0.09250766660541979 0.02720848875462489 3.499921071233338e-11 10.455941749568106 0.2699235862742856 AMADELS(ph)EK ddPTM_A549_MK2206_60min_R1 6 AMADELSEK 9 0 Q03135;E9PCT5 Q03135 CAV1 Caveolin-1;Caveolin 1 AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK 146.17 3.0595e-05 426002000.0 45833.8 46376.2 40705.1 38080.0 81620.5 65045.899999999994 55814.8 68339.9 82121.7 56904.5 58890.3 True False 53569.42491117642 48736.55049123403 46477.695258001506 47409.60170947618 69614.2325720225 71929.01396402612 65955.62668152664 78027.29010716609 63521.26607140747 44049.73392810834 44266.21322040406 1.210165067530198 1.1009875692002815 1.0499586903127753 1.0710110095349923 1.5726267847988076 1.6249190687689357 1.4899767087175433 1.7626827422229152 1.4349830593173032 0.9951096044466723 1.0 15.433918342056556 -6.699743919374357 24.999979749132613 1.3280379723474034 1.1033786598671127 0.23374467443042912 0.23515966151330553 118.22116210668085 47903.88967614743 0.04065020340177956 0.08462013341667204 1.9964391631961615e-07 6.699743919374357 -0.2246593124802907 AMADELS(ph)EK ddPTM_A549_PD325901_60min_R1 4 AMADELSEK 9 0 Q03135;E9PCT5 Q03135 CAV1 Caveolin-1;Caveolin 1 AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK 143.89 3.4868e-05 481561000.0 52263.3 50940.799999999996 50259.200000000004 45944.7 52439.3 44269.700000000004 46937.399999999994 46818.2 46720.600000000006 51783.8 55761.4 True False 57569.03174179207 55233.759992753134 53670.09154512139 48782.59977101557 48756.14447376399 43909.18224077226 48723.62844213081 45884.3742728326 44757.095657263024 48514.16203052141 48903.10130063817 1.1772061527934388 1.1294531128648961 1.0974782808799288 0.997535912316035 0.996994938501533 0.8978813423474895 0.996330031148658 0.9382712558606958 0.9152199853770615 0.9920467361011379 1.0 15.57763833939314 -6.13731062703339 1.2612069782719801 0.9564664753285327 1.1729185837994986 0.8479766422796191 0.03271427536992702 0.16086628573582407 0.44130950220684684 0.0055745872190849696 0.02946597621428082 7.289359558307279e-07 6.13731062703339 0.21645210847096596 AMADELS(ph)EKQVYDAHTK ddPTM_A549_MK2206_60min_R1 14 AMADELSEKQVYDAHTK 17 1 Q03135;E9PCT5 Q03135 CAV1 Caveolin-1;Caveolin 1 AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(0.999)EKQVY(0.001)DAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK 230.48 1.7443999999999997e-64 1193766300.0 42092.689999999995 49625.939999999995 47272.6 41916.9 52797.700000000004 39093.990000000005 39136.1 35594.28999999999 58366.49999999999 70472.50000000001 70997.3 True False 49196.90700453431 52151.68837647225 53976.56551275889 52186.54238172112 45031.22827069028 43230.8900733097 46246.6227841162 40639.889610441394 45146.58094214806 54552.71330472306 53366.7109842027 0.9218650746360834 0.9772325746645674 1.0114276206516966 0.9778856785303683 0.8438074492546516 0.8100722206040889 0.8665818434605397 0.7615213465651158 0.8459689591047139 1.0222236352708982 1.0 15.703652479633465 -6.737119531557156 24.442067242301142 0.894453178937092 0.9752781369074338 0.2477216224757719 0.07514792986966382 262.02065764302864 263335.4470327813 0.012347409111053994 0.0256922968193371 1.8318101809694236e-07 6.737119531557156 0.08082495797034184 AMADELS(ph)EKQVYDAHTK ddPTM_A549_PD325901_60min_R1 8 AMADELSEKQVYDAHTK 17 1 Q03135;E9PCT5 Q03135 CAV1 Caveolin-1;Caveolin 1 AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK;AMADELS(1)EKQVYDAHTK 271.43 1.2273999999999997e-100 2163625600.0 85541.70000000001 85440.0 90988.6 90454.79999999999 100306.79999999999 100883.5 101251.0 102945.9 99323.0 101430.7 103610.59999999999 True False 94225.83041152866 92640.32865170608 97163.63355490028 96041.98755824404 93261.59640767424 100061.9382238178 105104.1622116733 100892.56326500379 95148.7997150364 95026.34829172854 90867.15304170812 1.0369625024818252 1.0195139338104284 1.0692932517683489 1.0569494514058415 1.0263510331931172 1.1011893173090748 1.1566793796591204 1.110330409699245 1.0471198505730996 1.0457722632523916 1.0 16.47147125804127 -9.660885568669977 1.257187670929203 1.0100622612485937 1.07071800931928 0.15460450368171996 0.040110005024651826 0.38942985400834607 1.2556484804048615 0.011522204953355963 0.008215360454680434 2.1833051104840834e-10 9.660885568669977 0.06065574807068641 AMASVAR ddPTM_A549_PD325901_60min_R1 1 AMASVAR 7 0 H7C2G2;Q93070 H7C2G2 ART4 NAD(P)(+)--arginine ADP-ribosyltransferase;Ecto-ADP-ribosyltransferase 4 0 81.381 0.009370299999999998 4164500.0 2824.0 2828.3 2377.9 3414.0 2972.1 3966.1 2861.4 2334.8 5950.6 3311.3 3736.8 False True 3110.690401081079 3066.6507669197144 2539.2785934743124 3624.8750262434414 2763.3499491883767 3933.8013965562627 2970.2921428181608 2288.2305823848337 5700.516975768918 3102.223952890006 3277.1972895268905 0.9491922903213895 0.9357540898498755 0.7748323854621804 1.1060899622453744 0.8432052467574527 1.2003553796189554 0.9063513363417203 0.6982279003151416 1.7394488253686637 0.9466088486048564 1.0 11.678246811389105 -8.747834703171282 24.996647014978585 1.349184202231495 0.9336204929216086 0.19817948543146424 0.23874401199081965 206.0614215587789 378608.16264677077 0.047950431928695844 0.05422711186838796 1.787167659327705e-09 8.747834703171282 -0.4155637093098864 AMDNHS(ph)DS(ph)EEELAAFCPQLDDSTVAR ddPTM_A549_PD325901_60min_R1 3 AMDNHSDSEEELAAFCPQLDDSTVAR 26 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 2 AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR 170.01 1.5405e-48 62752300.0 7710.299999999999 8450.5 7667.799999999999 8515.7 9038.9 8702.3 8726.2 8952.9 8692.4 9089.9 9756.2 True False 8493.043979977141 9162.653292032324 8188.183018227154 9041.695448442086 8404.038846512165 8631.431354038374 9058.280316159866 8774.327386085819 8327.088656635256 8515.96216270796 8556.249249647359 0.9926129700262271 1.070872648130249 0.9569827595385473 1.056735864586312 0.9822106160428337 1.0087868062508947 1.0586741984559647 1.0254875857487962 0.9732171672042458 0.9952915014787513 1.0 13.062762794513404 -8.752253518390079 24.99371687297253 0.9873525509124531 1.0197117770967359 0.1343460776331652 0.0332448360121301 241.52348824281924 657159.0569583969 0.005229680396365066 0.00588910435267034 1.7690759628784713e-09 8.752253518390079 0.032359226184282774 AMDNHS(ph)DSEEELAAFCPQLDDSTVAR ddPTM_A549_MK2206_60min_R1 3 AMDNHSDSEEELAAFCPQLDDSTVAR 26 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 1 AMDNHS(0.949)DS(0.051)EEELAAFCPQLDDSTVAR;AMDNHS(0.92)DS(0.08)EEELAAFCPQLDDSTVAR;AMDNHS(0.943)DS(0.057)EEELAAFCPQLDDSTVAR 158.57 3.4658e-41 22920900.0 2998.95 4010.0 3450.0 3008.07 4746.9 3277.2999999999997 3449.43 3662.6 4669.200000000001 4626.5 5272.6 True False 3505.0994427119836 4214.091871905172 3939.2618772612054 3745.047285037393 4048.6372981804066 3624.1017107043244 4076.1467808548628 4181.784766242076 3611.6336551802474 3581.3704367562004 3963.267903642921 0.8843962931423833 1.0632871595764952 0.9939428706397441 0.9449392208876555 1.0215401523724945 0.9144225923695836 1.0284812634311666 1.055135526517978 0.9112766895875342 0.9036407640937694 1.0 11.952474776619415 AMDNHS(ph)DSEEELAAFCPQLDDSTVAR ddPTM_A549_PD325901_60min_R1 3 AMDNHSDSEEELAAFCPQLDDSTVAR 26 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 1 AMDNHS(0.945)DS(0.055)EEELAAFCPQLDDSTVAR;AMDNHS(0.654)DS(0.346)EEELAAFCPQLDDSTVAR;AMDNHS(0.772)DS(0.228)EEELAAFCPQLDDSTVAR 142.68 8.889299999999998e-33 30130200.0 4182.1 4800.5 3790.43 4438.8 4808.2 4566.5 4542.9 4191.0 5281.8 5281.299999999999 4882.5 True False 4606.6637133007 5205.054982356213 4047.671373507229 4712.974594753779 4470.4886193895045 4529.3119380182525 4715.782545470268 4107.407217224104 5059.824313954269 4947.837816687701 4281.98345271758 1.0758247350015002 1.2155710174575294 0.9452795458465296 1.100652220354254 1.0440228620108956 1.0577602618113118 1.1013079797114524 0.959230053683958 1.1816543360864762 1.155501386523933 1.0 12.064063505250429 -11.259766279485685 1.7698802391269812 0.9998304943997316 1.0909485824169294 0.0 0.08995277421246871 0.5687127500279863 3.212521060266786 0.05877678706136373 0.011866123788733978 5.498366951210221e-12 11.259766279485685 0.09111808801719778 AMDNHSDS(ph)EEELAAFCPQLDDSTVAR ddPTM_A549_MK2206_60min_R1 2 AMDNHSDSEEELAAFCPQLDDSTVAR 26 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 1 AMDNHS(0.067)DS(0.933)EEELAAFCPQLDDSTVAR;AMDNHS(0.45)DS(0.55)EEELAAFCPQLDDSTVAR 104.39 1.1704e-12 6014000.0 2122.5 1974.4499999999998 2048.84 1647.5 2653.4 2332.6000000000004 2083.8 1866.1 3185.7 2689.0 2927.1 True False 2480.7261098571767 2074.9410714421847 2339.3963201761885 2051.1375739590862 2263.088374937725 2579.434183745436 2462.3994868559043 2130.625389691569 2464.144036517542 2081.5530324083925 2200.220286149752 1.1274898815692187 0.9430606037512733 1.0632554998708723 0.9322419154440434 1.028573542923735 1.1723526957654247 1.119160432415133 0.9683691233572027 1.119953330141156 0.946065739649633 1.0 11.1034322583329 -7.011830564684779 24.920963314709837 1.0645452491035323 1.0103297035855086 0.03667896714037533 0.08106065709824108 1039.8386860321623 2190416.1194607383 0.011020669497392542 0.01980869257090036 9.73126804670745e-08 7.011830564684779 -0.05421554551802377 AMDT(ph)PKPAGGDEK ddPTM_A549_MK2206_60min_R1 3 AMDTPKPAGGDEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMDT(1)PKPAGGDEK;AMDT(1)PKPAGGDEK;AMDT(1)PKPAGGDEK 87.287 7.7034e-05 83726000.0 17730.699999999997 18654.6 18614.600000000002 16734.6 26751.4 21309.3 20108.100000000002 20959.6 29319.7 26905.6 26832.600000000002 True False 20723.208686004557 19604.039459761152 21254.430185642464 20834.57775124475 22816.3044973653 23564.23598203146 23761.481486537683 23930.68748608296 22678.83476393993 20827.60627324925 20169.324877913936 1.0274616930136884 0.9719730124050018 1.0537997832994774 1.0329833981730983 1.131237888995972 1.1683205126927705 1.1780999924572229 1.1864892667918616 1.12442210640248 1.0326377506098954 1.0 14.299875173386962 -6.61225846680305 6.139187847556075 1.0915844922361722 1.0179351321453805 0.3181808500652913 0.06060886085253458 0.3056825166046305 17.07471984247006 0.011273034088603816 0.023677962121459825 2.441976797655871e-07 6.61225846680305 -0.0736493600907917 AMDT(ph)PKPAGGDEK ddPTM_A549_PD325901_60min_R1 3 AMDTPKPAGGDEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMDT(1)PKPAGGDEK;AMDT(1)PKPAGGDEK;AMDT(1)PKPAGGDEK 93.152 6.99e-05 75956000.0 16806.4 17557.1 17812.5 16674.699999999997 20584.8 18218.7 17280.1 17687.5 19675.1 19050.6 19275.699999999997 True False 18512.573355782235 19036.698433647816 19021.363365263984 17704.658348008656 19138.99466170481 18070.332947590745 17937.703661533546 17334.70893692468 18848.2239690033 17847.741864804255 16904.911098729794 1.0951003082869355 1.1261046167275142 1.1251974798431927 1.0473085746862612 1.1321558894884034 1.0689398389648153 1.0610942321300556 1.0254244364661096 1.1149555214413118 1.05577259534629 1.0 14.045154808808903 -14.999999998611909 0.28141382105595697 0.29756150629984957 1.0983244946484338 0.24353669558799673 0.036883114828494 27.84620670686963 0.3667338677442295 11.052959881030452 0.013941535179843133 1.0000000031961986e-15 14.999999998611909 0.8007629883485843 AMDT(ph)PKPAVSDEK ddPTM_A549_MK2206_60min_R1 2 AMDTPKPAVSDEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMDT(0.997)PKPAVS(0.003)DEK;AMDT(0.998)PKPAVS(0.002)DEK 62.475 0.0019909000000000003 91243000.0 11782.0 11559.900000000001 12311.8 11357.8 15992.2 12453.3 12379.599999999999 12648.1 17120.4 17520.3 16933.1 True False 13770.51355775608 12148.249533674954 14057.798371149129 14140.461509871022 13639.768564739243 13771.09994016849 14628.81307586206 14441.006908181724 13242.6567356609 13562.45206162319 12728.143940214672 1.0818948640459694 0.9544399867519147 1.1044656972124116 1.1109602135464638 1.0716227463176533 1.0819409337962145 1.1493280673580544 1.1345728784976454 1.040423238286976 1.0655482940267917 1.0 13.635734435593436 -9.060019795133329 3.193979313470512 1.0157776770824687 1.0847457788939936 0.1420837270026195 0.05050558113733706 0.22696260678452226 4.814900554190289 0.009553325990639346 0.009475524007841954 8.709238923587284e-10 9.060019795133329 0.0689681018115249 AMDT(ph)PKPAVSDEK ddPTM_A549_PD325901_60min_R1 4 AMDTPKPAVSDEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMDT(1)PKPAVSDEK;AMDT(1)PKPAVSDEK;AMDT(0.918)PKPAVS(0.082)DEK;AMDT(0.626)PKPAVS(0.374)DEK 80.609 0.00019040000000000002 136871000.0 35296.0 38074.6 37751.6 41472.2 42796.7 38288.5 38927.6 41941.0 40730.8 42014.2 43307.0 True False 38879.22393645812 41283.280164820324 40313.65059481261 44033.84360380003 39790.807432599926 37976.69115051174 40409.011120000076 41104.453852922015 39019.026121172436 39361.416241811785 37980.5135456918 1.023662407557632 1.086959503987622 1.0614298447100765 1.1593798896590979 1.0476637548549808 0.9998993590443304 1.0639406197440358 1.0822511339524679 1.0273432999854326 1.0363581891661027 1.0 15.212971792272613 -9.014639379667074 0.46801587297000813 0.9992015981321956 1.0749937042768734 0.15720003297073926 0.04007984925977168 0.7487308047913848 0.40061311821685525 0.019493441655273128 0.015025975621012497 9.668533811707166e-10 9.014639379667074 0.0757921061446778 AMEAVAAQGK ddPTM_A549_PD325901_60min_R1 2 AMEAVAAQGK 10 0 P18669;P15259 P18669 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 0 ; 74.301 0.00098604 3592000.0 3213.8 3316.6 3461.0 3616.5 4041.0 3943.3999999999996 3456.8 3363.5 3724.3 3609.4 3274.5 False True 3540.0626101254866 3596.1015216087117 3695.884272683712 3839.882991332576 3757.174100693192 3911.2862578301047 3588.3504156335416 3296.412353885297 3567.780622602119 3381.501868015942 2871.7572587657382 1.2327165185427202 1.252230323657053 1.2869765581343662 1.3371196258359703 1.3083188313444012 1.361983588930197 1.2495312424754836 1.1478729073717298 1.2423684528738779 1.1775026798293142 1.0 11.487718092188222 -10.63642682806781 0.39353424540278237 0.9208654540211708 1.2945378757047437 0.4449065392935184 0.07150035091085614 0.7382894683191157 0.15171228356432132 0.11428046810802148 0.017178339568055378 2.309793590786874e-11 10.63642682806781 0.37367242168357284 AMGDS(ph)DDEYDR ddPTM_A549_MK2206_60min_R1 4 AMGDSDDEYDR 11 0 C9JUL9 C9JUL9 SRRT 1 AMGDS(1)DDEYDR;AMGDS(1)DDEYDR;AMGDS(1)DDEYDR;AMGDS(0.999)DDEY(0.001)DR 67.252 0.0016754 17604200.0 3415.39 3359.26 3074.91 2700.71 3667.17 3447.78 3014.58 3751.6800000000003 3331.8199999999997 4263.58 4574.0 True False 3991.824333731496 3530.23198544044 3510.978475075147 3362.384071239478 3127.7341508707264 3812.6217911488593 3562.2901646444366 4283.492129038136 2577.1680898232335 3300.4343168150904 3438.1495640220573 1.1610385934059635 1.0267825525631473 1.0211825895578237 0.9779632935182883 0.9097143950921678 1.1089167938025164 1.036106806382546 1.245871376237388 0.7495799824392688 0.9599449515960372 1.0 11.747416589972417 -8.774808459541735 24.999975720090053 0.8817461206671934 1.0514465443877798 0.3068676812368726 0.10354122717750401 211.70490294134126 395883.61428380216 0.020846878319476844 0.022254333018795435 1.6795445981314592e-09 8.774808459541735 0.16970042372058647 AMGDS(ph)DDEYDR ddPTM_A549_PD325901_60min_R1 3 AMGDSDDEYDR 11 0 C9JUL9 C9JUL9 SRRT 1 AMGDS(1)DDEYDR;AMGDS(1)DDEYDR;AMGDS(1)DDEYDR 112.64 1.5271e-05 19244300.0 4821.94 4669.6 4857.63 4548.7 4907.5 4314.5 4424.9 4257.0 4639.700000000001 5879.1 6444.700000000001 True False 5311.459799075386 5063.1235799626265 5187.297983102159 4829.662868152766 4562.814129955907 4279.364142467917 4593.291990898186 4172.090795448107 4444.70954399137 5507.892622666515 5652.0427563193 0.9397416169820862 0.8958041894325324 0.9177740167132441 0.8544986434776937 0.8072858480864155 0.7571358404327972 0.8126782101502379 0.7381562693918896 0.7863899364565026 0.9744959230020657 1.0 12.464556664009896 -4.291827604965913 16.570385558048663 0.8692290555573918 0.8550570877493906 0.0 0.08532092012272226 0.0 0.0 0.013469795280605506 0.0 5.1070768732357756e-05 4.291827604965913 -0.014171967808001229 AMGDS(ph)DDEYDRR ddPTM_A549_MK2206_60min_R1 3 AMGDSDDEYDRR 12 1 C9JUL9 C9JUL9 SRRT 1 AMGDS(1)DDEYDRR;AMGDS(1)DDEYDRR;AMGDS(1)DDEYDRR 61.167 0.0021978 23588300.0 2419.09 2781.16 2104.29 2281.02 2881.21 2483.11 2279.88 2366.84 3753.41 3520.01 4175.219999999999 True False 2827.3732509278693 2922.709164705181 2402.70996397159 2839.8700023988777 2457.387825715807 2745.8710520449836 2694.1046847552734 2702.346818143503 2903.268627964125 2724.8372962468834 3138.397643790157 0.9008970729130831 0.9312743305451585 0.7655849375001131 0.9048789620454992 0.7830071599047236 0.8749277063338826 0.8584331848725444 0.8610594082908986 0.9250799157680755 0.8682256378946843 1.0 11.615812442060262 -9.328069542052603 0.772752594594634 0.9879830506986198 0.85559101046737 0.09994877589147189 0.05972805034109661 0.2841908559536728 0.3670531709652172 0.014723811238806752 0.010687151426138044 4.698188721330501e-10 9.328069542052603 -0.13239204023124984 AMGDS(ph)DDEYDRR ddPTM_A549_PD325901_60min_R1 5 AMGDSDDEYDRR 12 1 C9JUL9 C9JUL9 SRRT 1 AMGDS(1)DDEYDRR;AMGDS(1)DDEYDRR;AMGDS(1)DDEYDRR;AMGDS(1)DDEYDRR;AMGDS(0.999)DDEY(0.001)DRR 89.507 7.278e-05 57258600.0 4222.5599999999995 4473.58 4560.08 4736.59 4489.34 5328.99 4354.0 4360.04 4557.54 4501.37 5085.65 True False 4651.231182715623 4850.584286630373 4869.554450788657 5029.158406723618 4174.024245782221 5285.592472261004 4519.693852600221 4273.075581814788 4366.002443072272 4217.152729991389 4460.14729059153 1.0428425071358463 1.087539036404123 1.0917922959765818 1.1275767545462883 0.9358489695143316 1.1850712830517307 1.013350806179496 0.9580570558350482 0.9788919868817222 0.9455187138970216 1.0 12.122875638730815 -7.984436398042185 24.99775271207389 0.9872770114848517 1.0772163282613878 0.4143170204786343 0.05914843803721065 184.97213307394242 297095.4199330943 0.008165948469513837 0.011280987443598709 1.0364863856283938e-08 7.984436398042185 0.0899393167765361 AMGIMNSFVNDIFER ddPTM_A549_MK2206_60min_R1 3 AMGIMNSFVNDIFER 15 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q16778;P33778;P23527;P06899;Q8N257 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ;; 61.419 0.0015033 7982000.0 4313.6 4347.299999999999 4373.9 3994.1 5835.5 3777.8 4226.4 4259.0 6037.3 6697.6 5710.9 False True 5041.630222605384 4568.559001180382 4994.184789841386 4972.654679301962 4977.105680240106 4177.564288499314 4994.282172592283 4862.726292640474 4669.861189587014 5184.6075083147825 4292.725917178306 1.1744589148890614 1.064255927194948 1.163406396354362 1.1583909094691482 1.1594277799854635 0.9731728438058095 1.1634290818816413 1.1327828485814069 1.0878544961138834 1.2077657899302194 1.0 12.067678346907236 -10.886206707892603 0.26499973427519546 0.9276386566568601 1.1398368550487878 0.0 0.08412536437927122 3.843584907570077 0.3264977870513759 0.25844482927185025 0.03574061856898143 1.299550893301808e-11 10.886206707892603 0.21219819839192777 AMGIMNSFVNDIFER ddPTM_A549_PD325901_60min_R1 3 AMGIMNSFVNDIFER 15 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q16778;P33778;P23527;P06899;Q8N257 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ;; 56.551 0.0034496 31017200.0 6763.5 6990.4 7546.9 8135.299999999999 10253.6 9064.0 8222.0 9717.2 8602.599999999999 9450.0 9009.5 False True 7450.125540974455 7579.50554081093 8059.078017196387 8637.799004393166 9533.422508999676 8990.185789159617 8534.89270925104 9523.38282300407 8241.062638347337 8853.32538725291 7901.388615926072 0.9428881305696003 0.9592624675533168 1.019957175749143 1.0932001226952415 1.206550262542975 1.1377982056266618 1.0801762986379477 1.2052796395571155 1.0429891553158919 1.1204771487138487 1.0 12.947890504187567 -5.87574926817651 3.0348218993109013 1.0636698520358088 0.9479678866945292 0.32191040303225305 0.07072875196779099 0.2979413917127531 5.389091336070076 0.01175948572524289 0.04544418636144471 1.331222752806006e-06 5.87574926817651 -0.11570196534127952 AMHT(ph)PK ddPTM_A549_MK2206_60min_R1 2 AMHTPK 6 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PK;AMHT(1)PK 57.177 0.027798000000000003 23723700.0 1648.08 1326.62 1183.49 1299.89 2251.22 1986.9899999999998 1382.19 1801.96 2822.1 1968.79 1887.13 True False 1926.2356123125633 1394.1392915478393 1351.3266780057581 1618.3631083542791 1920.0685201731 2197.2519629427848 1633.3160316428462 2057.3933482710563 2182.898855967655 1524.0389716159614 1418.5035388615984 1.3579350065340259 0.9828239784771264 0.9526424439450097 1.1408946569517024 1.3535874021957155 1.5489929370963438 1.1514359935637826 1.4503970500645988 1.538874451959078 1.07439913251049 1.0 10.470154034493047 -6.620056398100006 5.309300035694158 1.295083166227514 1.080380572726105 0.18845679738611176 0.19332278884204632 0.31208802465738184 13.898796229288285 0.03350115746687053 0.07081842666201861 2.398521423385926e-07 6.620056398100006 -0.21470259350140886 AMHT(ph)PK ddPTM_A549_PD325901_60min_R1 4 AMHTPK 6 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PK;AMHT(1)PK;AMHT(1)PK;AMHT(1)PK 57.281000000000006 0.01935 68872000.0 15634.6 16291.5 14041.5 14731.199999999997 16015.0 16506.7 13307.3 15491.0 16048.6 17667.7 20453.3 True False 17221.813082415792 17664.44188002423 14994.440628398823 15641.11276701739 14890.161648750654 16372.274907978937 13813.716583533971 15182.0198525456 15374.133152509838 16552.15840681146 17937.673764151248 0.9600917771642098 0.9847677080250464 0.835918905960118 0.8719699651510233 0.8301054999957074 0.9127312227463525 0.770095206611513 0.8463761830080292 0.857086228384603 0.9227594739676466 1.0 14.130705186945583 -10.66959200676294 0.954230713524266 0.9993610189890921 0.8724036012427149 0.19585111634271313 0.06152758857379064 0.46523860713218845 0.759582179223233 0.03960973105623107 0.01072227796278028 2.139971518501472e-11 10.66959200676294 -0.12695741774637725 AMHT(ph)PKPAVGEEK ddPTM_A549_MK2206_60min_R1 4 AMHTPKPAVGEEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PKPAVGEEK;AMHT(1)PKPAVGEEK;AMHT(1)PKPAVGEEK;AMHT(1)PKPAVGEEK 115.73 1.01e-05 36266300.0 4139.85 4966.67 5149.28 4418.57 6658.499999999999 5531.5 5300.2 5269.9 7745.5 6449.6 6948.799999999999 True False 4838.555470385033 5219.4522886372215 5879.525333143066 5501.119848357144 5679.0434704616155 6116.839658487466 6263.177733099947 6016.9244633918815 5991.15661702189 4992.630880558265 5223.221182876362 0.9263546958814601 0.9992784348762606 1.1256512269513514 1.053204460571541 1.0872684252927305 1.1710857044577614 1.1991025296100697 1.1519566667246584 1.1470233419681906 0.9558528551166746 1.0 12.350724082127275 -5.558240322890628 3.501958181420816 1.0945026580099628 0.935251704509988 0.37435413313745425 0.07017358576270633 0.19654013811404453 4.808548282551386 0.010337085404595237 0.05644621073036423 2.7654109433331146e-06 5.558240322890628 -0.15925095349997487 AMHT(ph)PKPAVGEEKDINTFLGT(ph)PVQK ddPTM_A549_MK2206_60min_R1 2 AMHTPKPAVGEEKDINTFLGTPVQK 25 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 AMHT(0.979)PKPAVGEEKDINT(0.039)FLGT(0.982)PVQK;AMHT(0.989)PKPAVGEEKDINT(0.019)FLGT(0.991)PVQK 50.851000000000006 0.0013344000000000001 8122400.0 2041.07 2271.59 2275.79 1797.55 3118.2 2253.5299999999997 2064.79 2127.13 3997.5 3453.3 3641.1 True False 2385.552716629535 2387.2042282546313 2598.5312427977638 2237.949830695086 2659.516910654561 2491.997048827852 2439.9356159253316 2428.657191562416 3092.072632695758 2673.19713157899 2736.914380752234 0.8716212437649846 0.8722246647695695 0.9494382656148578 0.817690844271128 0.9717209019609884 0.9105133380690311 0.8914913937697684 0.8873705398467399 1.1297659343826127 0.976719312222061 1.0 11.418334588054682 -8.748512679040259 24.997625403991474 1.0612783572447475 0.897643077366038 0.5580486633020387 0.05375931651784726 103.58676467406063 200315.73538018833 0.009638182139191652 0.010895211501286991 1.7843798935778338e-09 8.748512679040259 -0.16363527987870952 AMHT(ph)PKPAVGEEKDINTFLGT(ph)PVQK ddPTM_A549_PD325901_60min_R1 3 AMHTPKPAVGEEKDINTFLGTPVQK 25 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 AMHT(1)PKPAVGEEKDINT(0.123)FLGT(0.877)PVQK;AMHT(0.975)PKPAVGEEKDINT(0.148)FLGT(0.877)PVQK;AMHT(0.932)PKPAVGEEKDINT(0.068)FLGT(1)PVQK 76.47800000000001 2.3292e-06 20893900.0 5408.1 5799.0 5852.6 6092.7 6788.7 7128.299999999999 6656.6 5672.0 6923.0 6905.200000000001 7156.0 True False 5957.1263307672025 6287.702081592267 6249.7926305428155 6469.032241474344 6311.885131743591 7070.249488180335 6909.92055563129 5558.8675104020795 6632.05038538101 6469.2044935512 6275.857365621504 0.9492131486925951 1.0018873462669255 0.9958468248144917 1.0307806351544941 1.0057406923107342 1.1265790594461929 1.1010321224767023 0.885754278109152 1.0567560731559476 1.0308080819345626 1.0 12.615596848528183 -5.178257229869559 1.0551074755618592 1.02814308778699 0.9036620370283488 0.1370331308709245 0.05871358198503037 3.310058393555556 2.5674105353883383 0.008692264085719608 0.47979081515698785 6.633500559888327e-06 5.178257229869559 -0.12448105075864113 AMHT(ph)PKPAVSGEK ddPTM_A549_MK2206_60min_R1 3 AMHTPKPAVSGEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PKPAVSGEK;AMHT(1)PKPAVSGEK;AMHT(1)PKPAVSGEK 84.375 0.00035704 89849500.0 9309.5 10578.7 9314.0 7686.2 12121.4 9663.3 9833.5 9592.2 13542.3 13886.699999999999 14807.0 True False 10880.716004577333 11117.110644719014 10634.865253568376 9569.319345046624 10338.358117121486 10685.8639920206 11620.119663114281 10951.923724880475 10474.990672609316 10749.684825267983 11130.013247589555 0.9776013525351182 0.9988407378694418 0.9555123625635923 0.8597760965935118 0.9288720405935259 0.9600944540056909 1.0440346659633015 0.9839991634558342 0.9411480866725744 0.9658285741570037 1.0 13.442167689409949 -7.524452118942694 24.99869620052346 0.9785412009985863 0.9432451688734274 0.19202631693352834 0.040378764417499755 88.3714590427408 1404090.5239226536 0.00694175640537399 0.010338404236794047 2.98915118333538e-08 7.524452118942694 -0.03529603212515897 AMHT(ph)PKPAVSGEK ddPTM_A549_PD325901_60min_R1 4 AMHTPKPAVSGEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PKPAVSGEK;AMHT(1)PKPAVSGEK;AMHT(1)PKPAVSGEK;AMHT(1)PKPAVSGEK 99.044 0.00014817 174060000.0 17945.6 16665.0 18436.5 18262.6 20358.8 20089.5 18810.0 17382.6 19670.800000000003 19990.5 22068.3 True False 19767.424101147506 18069.41803582258 19687.711757680812 19390.63932462609 18928.868122047148 19925.8977726525 19525.824843226947 17035.890406614104 18844.104683049653 18728.29641839992 19354.039002479738 1.021359112618033 0.9336251742340415 1.017240471364056 1.0018910947808704 0.9780319301630985 1.0295472572985667 1.0088759685110276 0.8802240402859258 0.9736523048566375 0.9676686306150544 1.0 14.240347053969819 AMHT(ph)PKPSVGEEK ddPTM_A549_MK2206_60min_R1 1 AMHTPKPSVGEEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PKPSVGEEK 108.34 4.1736e-05 5910600.0 1791.7 2137.1 1623.2 1477.4 2773.6 2339.1 2081.2 2161.4 3125.8 2293.0 2947.6 True False 2094.0951571406854 2245.8692617078646 1853.3941678754743 1839.3630663230065 2365.6071141657035 2586.6220094310834 2459.3271005108513 2467.7850690098917 2417.811290876897 1775.0097074423365 2215.629570378536 0.9451467813651329 1.0136483515717667 0.8365090413370976 0.8301762582130346 1.0676907122888526 1.167443350645101 1.1099901957395704 1.113807606651628 1.091252492384735 0.8011310785760454 1.0 11.113500982994223 -6.780220618215488 24.813306861135928 1.0655881288340134 0.9090427752548219 0.31024031349234826 0.10148912646055884 134.9473008287326 178288.81788896216 0.010658752035768352 0.020167902764785195 1.6587440643067524e-07 6.780220618215488 -0.15654535357919153 AMHT(ph)PKPSVGEEK ddPTM_A549_PD325901_60min_R1 2 AMHTPKPSVGEEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PKPSVGEEK;AMHT(1)PKPSVGEEK 97.904 9.107e-05 10767700.0 4083.0 4140.1 4290.1 4318.1 5389.9 4650.799999999999 4233.299999999999 4790.4 5260.2 5182.6 5559.0 True False 4497.503154254262 4489.000756682216 4581.251984467029 4584.819229883365 5011.332018145565 4612.9254267678225 4394.400548050644 4694.8517140039 5039.1320868382445 4855.369751531952 4875.278241404409 0.9225120970651878 0.92076811505 0.939690363835997 0.9404220647235567 1.0279068742345183 0.9461871094025988 0.901364051538679 0.9629915425404452 1.0336091269709018 0.995916440275474 1.0 12.251268843224697 -8.633239452608656 5.236918769612702 1.0157220091473704 0.9442614482954417 0.4601823626387481 0.03149146212956338 0.12923816867003265 5.511492992128741 0.00562341875924035 0.006374994986836422 2.32680799505484e-09 8.633239452608656 -0.07146056085192876 AMHT(ph)PKPSVGEEKDIIIFVGT(ph)PVQK ddPTM_A549_PD325901_60min_R1 1 AMHTPKPSVGEEKDIIIFVGTPVQK 25 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 AMHT(0.765)PKPS(0.236)VGEEKDIIIFVGT(0.999)PVQK 43.15 0.0093258 4430200.0 884.11 1067.1 933.57 1049.0 1363.4 1113.7 1234.9 1121.8 1342.5 1156.4 1508.6 True False 973.864196352618 1157.0282619877755 996.9276742124622 1113.7943475481466 1267.6394874746582 1104.6303964460578 1281.8947952632086 1099.424818964924 1286.079393669507 1083.3847066475407 1323.051763803326 0.73607414539329 0.8745147345268721 0.7535061752585044 0.8418373173445345 0.9581178319362379 0.8349109435224359 0.9688923973603233 0.8309764206084045 0.9720552353692226 0.8188528493648476 1.0 10.369653792175455 -4.526012956729028 0.16438003898293244 1.037417468654845 0.45412211352765924 0.13445561487490687 0.08057763049152496 10.995120084064414 0.23258683260659316 0.09209435123595897 1.3831293331194583 2.9784275697815958e-05 4.526012956729028 -0.5832953551271858 AMHTPKPAVGEEKDINTFLGT(ph)PVQK ddPTM_A549_MK2206_60min_R1 1 AMHTPKPAVGEEKDINTFLGTPVQK 25 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHTPKPAVGEEKDINTFLGT(1)PVQK 106.39 1.685e-12 8097700.0 1456.6 1821.5 1953.4 2043.9 2153.2 1614.7 1808.2 1943.6 2941.6 2815.8 2619.6 True False 1702.4384695490992 1914.2065697444561 2230.421493055664 2544.6555917541564 1836.467132326793 1785.5664822488864 2136.726534280089 2219.1112520253655 2275.332296769942 2179.7088243419685 1969.0810227180111 0.8645852811069942 0.9721319476748553 1.1327220501962447 1.2923061887223177 0.9326518874230146 0.906801935343518 1.0851389605749533 1.12697813163738 1.1555300520997345 1.1069675646628387 1.0 10.94330676038533 AMHTPKPAVGEEKDINTFLGT(ph)PVQK ddPTM_A549_PD325901_60min_R1 2 AMHTPKPAVGEEKDINTFLGTPVQK 25 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHTPKPAVGEEKDINT(0.003)FLGT(0.997)PVQK;AMHTPKPAVGEEKDINTFLGT(1)PVQK 103.82 2.28e-12 35483000.0 5129.2 5046.9 5162.1 4987.799999999999 6062.1 5905.1 5277.200000000001 5268.1 6400.5 5569.1 6417.7 True False 5649.912608082532 5472.219975097093 5512.4311482290095 5295.885077884312 5636.319009109673 5857.010823429666 5478.0267337946425 5163.023612755502 6131.50924333831 5217.46607557145 5628.3635851522 1.0038286479905418 0.972257725057596 0.97940210592844 0.9409280331240545 1.0014134523893339 1.0406241058912122 0.9732894207911246 0.9173223326182622 1.0893946616230379 0.9269952085780829 1.0 12.458499812517497 -8.77015878016457 24.9999828036103 1.0422141411301866 0.9798370751161763 0.0 0.05003831820135232 171.3278507713213 491224.39727409504 0.007522838543644204 0.008068297758894402 1.6976228798485533e-09 8.77015878016457 -0.062377066014010274 AMIVPSS(ph)PSKTPEEVSTPAEEEK ddPTM_A549_MK2206_60min_R1 2 AMIVPSSPSKTPEEVSTPAEEEK 23 1 A0A5F9ZI40;A0A5F9ZHN5;A0A5F9ZGY4;A0A5F9ZHF7;Q01484;A0A5F9ZH30;A0A5F9ZHT4;A0A5F9ZI65;A0A5F9ZI46;A0A5F9ZHT8;A0A5F9ZH19;A0A5F9ZI30;A0A5F9ZGZ5;I6L894;A0A5F9ZHD2;A0A5F9ZHR8;D6RHE1;A0A5F9ZGY3;A0A5F9ZHE4;A0A5F9ZHS1;A0A5F9ZGX3;A0A5F9ZI56;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZHQ5;A0A5F9ZH39;A0A5F9ZGY1;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHA1;A0A5F9ZI36;A0A5F9ZHY6;A0A5F9ZH38;A0A5F9ZHQ3;A0A5F9ZI53;A0A5F9ZH34;A0A5F9ZH35;A0A5F9ZHL9;A0A5F9ZHG3;A0A5F9ZI69;Q01484-5;Q01484-2;A0A5F9ZH58;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZI08;A0A5F9ZHE2;A0A5F9ZHJ6;A0A5F9ZHJ4;A0A5F9ZI15;A0A5F9ZI73;A0A5F9ZGS7;A0A5F9ZGX8;A0A5F9ZHR2;A0A5K1VW73;A0A5F9ZHM6;A0A5F9ZH18;H0Y8Y2;A0A5F9ZH99;A0A5F9ZI16;E9PCH6;A0A5F9ZH10;A0A5F9ZHV4;H0Y931;Q01484-7 A0A5F9ZI40 ANK2 Ankyrin-2 1 AMIVPS(0.171)S(0.793)PS(0.034)KT(0.002)PEEVSTPAEEEK;AMIVPS(0.438)S(0.542)PS(0.019)KT(0.001)PEEVSTPAEEEK 72.425 5.2218999999999996e-05 6184200.0 3982.2 4343.2 4071.7 3734.2999999999997 4833.5 4114.8 4271.7 3884.3 6710.5 6835.4 6170.0 True False 4654.29800455748 4564.250328692902 4649.128285694047 4649.203667639094 4122.4985528987345 4550.225404816819 5047.812596219585 4434.911420169851 5190.582464466512 5291.278392608524 4637.818716662903 1.0035532410603654 0.9841372868444206 1.0024385534929408 1.0024548072427426 0.8888873853752175 0.9811132523288639 1.088402308197956 0.9562494118702742 1.119186147965987 1.1408980634792494 1.0 12.179230713597526 -7.690248568717273 8.539965855714087 1.050775767875648 0.9754439719941103 0.3439963715822 0.05686416231600967 0.28407553811976993 30.82224157776645 0.008853850468396646 0.013131777206487153 2.0405696890427517e-08 7.690248568717273 -0.07533179588153771 AMIVPSS(ph)PSKTPEEVSTPAEEEK ddPTM_A549_PD325901_60min_R1 1 AMIVPSSPSKTPEEVSTPAEEEK 23 1 A0A5F9ZI40;A0A5F9ZHN5;A0A5F9ZGY4;A0A5F9ZHF7;Q01484;A0A5F9ZH30;A0A5F9ZHT4;A0A5F9ZI65;A0A5F9ZI46;A0A5F9ZHT8;A0A5F9ZH19;A0A5F9ZI30;A0A5F9ZGZ5;I6L894;A0A5F9ZHD2;A0A5F9ZHR8;D6RHE1;A0A5F9ZGY3;A0A5F9ZHE4;A0A5F9ZHS1;A0A5F9ZGX3;A0A5F9ZI56;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZHQ5;A0A5F9ZH39;A0A5F9ZGY1;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHA1;A0A5F9ZI36;A0A5F9ZHY6;A0A5F9ZH38;A0A5F9ZHQ3;A0A5F9ZI53;A0A5F9ZH34;A0A5F9ZH35;A0A5F9ZHL9;A0A5F9ZHG3;A0A5F9ZI69;Q01484-5;Q01484-2;A0A5F9ZH58;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZI08;A0A5F9ZHE2;A0A5F9ZHJ6;A0A5F9ZHJ4;A0A5F9ZI15;A0A5F9ZI73;A0A5F9ZGS7;A0A5F9ZGX8;A0A5F9ZHR2;A0A5K1VW73;A0A5F9ZHM6;A0A5F9ZH18;H0Y8Y2;A0A5F9ZH99;A0A5F9ZI16;E9PCH6;A0A5F9ZH10;A0A5F9ZHV4;H0Y931;Q01484-7 A0A5F9ZI40 ANK2 Ankyrin-2 1 AMIVPS(0.121)S(0.755)PS(0.121)KT(0.003)PEEVSTPAEEEK 99.135 3.1622e-08 4704300.0 1704.9 1666.7 1932.9 1403.9 2490.0 2196.0 2140.9 2222.9 2212.4 2582.4 1962.0 True False 1877.9801929189555 1807.158658284159 2064.07821747193 1490.6157145117666 2315.1109900336655 2178.11650408148 2222.3731210454334 2178.5625156686842 2119.420521828244 2419.346823284858 1720.6864381427326 1.091413375086516 1.0502544904315991 1.199566737853671 0.8662913134369218 1.3454578002791378 1.2658416175073048 1.2915619439903352 1.2661008231227602 1.2317296602371641 1.4060358527008807 1.0 10.748768502695514 -5.746845774907568 24.665431647911273 1.148514136938516 1.0708339121284933 0.0 0.15528381216197584 623.2226167897876 1053319.0908785868 0.020554863107522296 0.07886217657648166 1.7912418404557694e-06 5.746845774907568 -0.07768022481002257 AMKPPGGESSNLFGS(ph)PEEATPSSRPNR ddPTM_A549_MK2206_60min_R1 10 AMKPPGGESSNLFGSPEEATPSSRPNR 27 2 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BMM8;B4E1P3 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 AMKPPGGES(0.017)S(0.015)NLFGS(0.962)PEEAT(0.004)PS(0.001)S(0.001)RPNR;AMKPPGGES(0.029)S(0.029)NLFGS(0.934)PEEAT(0.007)PS(0.001)S(0.001)RPNR;AMKPPGGES(0.006)S(0.006)NLFGS(0.986)PEEAT(0.001)PSSRPNR;AMKPPGGES(0.018)S(0.018)NLFGS(0.938)PEEAT(0.019)PS(0.004)S(0.004)RPNR;AMKPPGGES(0.003)S(0.002)NLFGS(0.98)PEEAT(0.01)PS(0.002)S(0.002)RPNR;AMKPPGGES(0.006)S(0.003)NLFGS(0.967)PEEAT(0.019)PS(0.002)S(0.002)RPNR;AMKPPGGES(0.001)S(0.001)NLFGS(0.995)PEEAT(0.003)PSSRPNR;AMKPPGGES(0.003)S(0.006)NLFGS(0.973)PEEAT(0.014)PS(0.002)S(0.002)RPNR;AMKPPGGESSNLFGS(0.946)PEEAT(0.038)PS(0.008)S(0.008)RPNR;AMKPPGGESSNLFGS(0.988)PEEAT(0.008)PS(0.002)S(0.002)RPNR 78.15899999999999 1.1152e-06 129632100.0 14687.530000000002 17122.629999999997 16873.760000000002 14727.939999999999 22003.58 17340.420000000002 17887.39 17434.45 24080.930000000004 25898.760000000002 26369.800000000003 True False 17166.42598836778 17994.09873033408 19266.712896827565 18336.285961162353 18766.882529966177 19175.371734760793 21137.297224873528 19905.836678263862 18626.637804343285 20048.21212853001 19821.450890544136 0.8660529485536833 0.9078093641933246 0.9720132498483645 0.9250728446881613 0.9467966110855667 0.9674050522663022 1.0663849655403943 1.0042572962083205 0.939721209471561 1.011440193719323 1.0 14.274774948329263 -4.142184908989278 0.5615322927714498 0.9793247215351236 0.519142323122528 0.5325933552611912 0.036221490366577846 7.703357145192111 0.6446604435908355 0.006999339445485226 3.0918849129357375 7.20800519553247e-05 4.142184908989278 -0.4601823984125957 AMKPPGGESSNLFGS(ph)PEEATPSSRPNR ddPTM_A549_PD325901_60min_R1 5 AMKPPGGESSNLFGSPEEATPSSRPNR 27 2 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BMM8;B4E1P3 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 AMKPPGGES(0.001)S(0.001)NLFGS(0.998)PEEATPSSRPNR;AMKPPGGES(0.008)S(0.001)NLFGS(0.99)PEEAT(0.001)PSSRPNR;AMKPPGGESSNLFGS(1)PEEATPSSRPNR;AMKPPGGESSNLFGS(0.999)PEEAT(0.001)PSSRPNR;AMKPPGGESSNLFGS(0.987)PEEAT(0.01)PS(0.002)S(0.002)RPNR 168.87 1.2203999999999998e-48 148120200.0 13276.02 13385.08 14441.679999999998 14241.960000000001 15444.429999999998 15312.75 13653.150000000001 14944.02 14521.019999999999 15640.100000000002 15969.27 True False 14623.791777110633 14513.08766654235 15421.779249676649 15121.653523362063 14359.666517191023 15188.048040926085 14172.728094540345 14645.9497977431 13910.752027607301 14652.581416843837 14005.151027543114 1.0441723726042564 1.0362678444523952 1.1011505137893576 1.079720846538762 1.0253132214676375 1.084461567822913 1.0119653880681234 1.0457545062484341 0.9932596942546236 1.046228019107217 1.0 13.773669920656454 -8.295983164218926 1.1138456551644926 0.9964164651182537 1.0617669337748408 0.24600233534216043 0.028812018027352528 0.23331147835001342 0.5643702010437307 0.004575754836166436 0.005929434208750067 5.058442710902478e-09 8.295983164218926 0.06535046865658711 AMLDSGIYPPGS(ph)PGK ddPTM_A549_MK2206_60min_R1 4 AMLDSGIYPPGSPGK 15 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK 177.84 9.8082e-28 109338000.0 15816.5 18178.899999999998 18642.8 17374.2 23220.5 19119.5 18498.3 18537.4 26348.9 26988.100000000002 26913.8 True False 18485.93852370132 19104.128361640112 21286.629369682665 21630.87977995747 19804.79521001035 21142.712799503046 21859.20166412639 21165.133218406572 20380.91622054717 20891.469465950515 20230.36067690795 0.9137720685722717 0.9443295978131828 1.0522120544286884 1.0692285780474569 0.9789640197871824 1.045098163951002 1.0805146785681232 1.0462064199658894 1.007442059291166 1.032679041150126 1.0 14.30423442075795 -5.626362529558071 5.265933000155491 1.0194043240389719 0.9210931171402311 0.597186743547043 0.031808332608319966 0.11506602653077495 4.797973082017586 0.004831059280297074 0.019847113088622918 2.3639455578954023e-06 5.626362529558071 -0.09831120689874073 AMLDSGIYPPGS(ph)PGK ddPTM_A549_PD325901_60min_R1 4 AMLDSGIYPPGSPGK 15 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK 158.91 5.069500000000001e-20 117909000.0 37089.3 36219.3 38300.2 37846.7 45919.1 43502.9 43027.1 40880.3 45275.7 41752.2 45152.2 True False 40854.57843230045 39271.62752264441 40899.48188981238 40184.40470290792 42693.900828295154 43148.62680574051 44664.519835832536 40064.910346525045 43372.9197794879 39115.95896652499 39598.76564337834 1.0317134326921147 0.9917386788345856 1.0328473937331313 1.0147893261321268 1.0781624157881895 1.089645752959367 1.1279270732344477 1.0117716978186833 1.0953098934976693 0.9878075321538693 1.0 15.27316783945202 -6.739513718376368 24.249496615373324 1.0551431427037825 1.0169894430209248 0.16071439947259414 0.04177627881790851 273.4650233530595 302446.4767971404 0.0064561717366545205 0.013429351119304041 1.8217395275686403e-07 6.739513718376368 -0.038153699682857756 AMLPGS(ph)PLFTR ddPTM_A549_PD325901_60min_R1 2 AMLPGSPLFTR 11 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 AMLPGS(0.989)PLFT(0.011)R;AMLPGS(0.993)PLFT(0.007)R 50.786 0.009169499999999999 7443800.0 4411.299999999999 4893.5 5127.799999999999 4779.4 5760.799999999999 5030.6 4984.5 5202.6 5508.5 5390.8 5217.4 True False 4859.131928572579 5305.892418739746 5475.803343966352 5074.612683195052 5356.181281681098 4989.632461490112 5174.18787512306 5098.830061639258 5276.996901324756 5050.423968000319 4575.692875823593 1.061944509922548 1.1595822890068255 1.196715665270857 1.109036996343785 1.1705727257135943 1.0904648972079476 1.1307987698347743 1.1143296108398675 1.153267285312486 1.1037506460901352 1.0 12.159774505179598 -10.807431144419747 0.7696316716624986 0.9879929244705848 1.1351471293252215 0.18703380218939136 0.04725366223714986 0.3854933519299214 0.3496035101094111 0.036341570112239825 0.006595134544467193 1.558005030455865e-11 10.807431144419747 0.1471542048546367 AMLS(ph)EQNRASPLPSGLLTPPQSGKK ddPTM_A549_PD325901_60min_R1 1 AMLSEQNRASPLPSGLLTPPQSGKK 25 2 I3L413;C9J2U0;P24864-2;P24864-3;P24864 I3L413 CCNE1 G1/S-specific cyclin-E1 1 AMLS(0.538)EQNRAS(0.46)PLPS(0.001)GLLTPPQSGKK 41.89 0.028151999999999996 5170500.0 2378.4 2224.5 2683.7 2671.3 3461.7 3167.9 3567.3 3679.0 3265.4 2701.5 2677.9 True False 2619.8534171144606 2411.9664218834287 2865.8320203990975 2836.300134037526 3218.562134216683 3142.101672713896 3703.05555360146 3605.619458880334 3128.166593734383 2530.926828959127 2348.535276606738 1.115526534010481 1.0270088109420858 1.2202635612694612 1.2076889635379593 1.370455094405478 1.337898435681041 1.5767510884280986 1.5352630615324987 1.3319649165560283 1.077661832108358 1.0 11.197545548687156 -4.113695668447576 14.538036789528272 1.2268127083322111 1.1883136811277448 0.0 0.18781844679813228 0.0 0.0 0.0289123430456265 0.0 7.696695967858312e-05 4.113695668447576 -0.038499027204466296 AMLSEQNRAS(ph)PLPSGLLTPPQSGK ddPTM_A549_PD325901_60min_R1 1 AMLSEQNRASPLPSGLLTPPQSGK 24 1 I3L413;C9J2U0;P24864-2;P24864-3;P24864 I3L413 CCNE1 G1/S-specific cyclin-E1 1 AMLS(0.127)EQNRAS(0.765)PLPS(0.093)GLLT(0.015)PPQSGK 42.828 0.0138 3703600.0 1681.9 1631.7 1695.2 2014.5 2394.8 2279.0 1812.8 1950.8 2215.5 2422.4 2279.4 True False 1852.6452498506605 1769.2090854516491 1810.2464660657126 2138.9310897385526 2226.5975096114953 2260.440579600041 1881.7870960022228 1911.8897636270044 2122.390239608785 2269.449250590629 1999.048250307106 0.9267636484342215 0.885025704196911 0.9055541634813524 1.0699747189243467 1.1138287979139232 1.1307583892748854 0.9413415087470406 0.956400008520699 1.0617003562984189 1.135264869290665 1.0 10.96509757897509 -6.250525500780205 24.00496408159483 1.0337472387924367 0.9037055980026772 0.4938122811358827 0.06379525239548624 282.6275010648987 621633.1182872314 0.008396462284935157 0.021958697203210243 5.61661297918599e-07 6.250525500780205 -0.13004164078975944 AMLT(ph)PKPAGGDEK ddPTM_A549_MK2206_60min_R1 1 AMLTPKPAGGDEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMLT(1)PKPAGGDEK 98.507 6.3386e-05 20596000.0 3828.7 3670.3 4501.6 3987.8 5865.8 4637.1 4554.6 5149.4 7216.2 5863.7 7013.1 True False 4474.890957272169 3857.102592881183 5139.994570051897 4964.811179019142 5002.948590378275 5127.7948441421395 5382.111864302673 5879.343219376112 5581.742221903474 4539.086097483488 5271.55371828664 0.8488751507452337 0.7316823082919884 0.9750435724901421 0.9418117398285386 0.9490463073578113 0.972729316283772 1.020972592128297 1.115296084147088 1.058841950626589 0.8610528015180278 1.0 12.364012523811628 -6.062378513853898 0.7025658351172875 1.033425072455824 0.7523749359849332 0.4438337858062248 0.0758071692226344 0.5548022509231298 0.33901937040206653 0.009500322695857587 0.09959731334211934 8.662065953399078e-07 6.062378513853898 -0.28105013647089083 AMS(ph)LNTLNVDAPR ddPTM_A549_MK2206_60min_R1 1 AMSLNTLNVDAPR 13 0 Q6P597-2;Q6P597;Q6P597-3 Q6P597-2 KLC3 Kinesin light chain 3 1 AMS(0.985)LNT(0.015)LNVDAPR 92.039 0.00017994 1703200.0 1650.4 1593.3 1682.6 1081.9 2748.9 1896.3 1580.1 1760.5 2847.6 2279.7 2879.3 True False 1928.9471715940103 1674.3921644654645 1921.2179810665823 1346.9655485683375 2344.5404514458114 2096.9652073379343 1867.1837168543116 2010.0562663051328 2202.623146682787 1764.714186679589 2164.290345362641 0.8912608124538867 0.7736448892142099 0.8876895769475281 0.6223589877644834 1.0832836991900772 0.96889274206256 0.8627233036709097 0.928736881635137 1.0177114874639075 0.8153777474731098 1.0 11.079678338224525 -7.262237592384942 0.6468032150921859 1.0055435151058274 0.804669772531233 0.06136283385947361 0.11852679357400579 0.6464059833642112 0.5153823757089013 0.020273374956038218 0.05915131844364988 5.4671678505908975e-08 7.262237592384942 -0.20087374257459445 AMS(ph)PVTITTFSR ddPTM_A549_MK2206_60min_R1 4 AMSPVTITTFSR 12 0 A0A075B6G6;Q7Z7B0-2;Q7Z7B0;Q7Z7B0-3 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 AMS(0.939)PVT(0.059)IT(0.001)TFSR;AMS(0.705)PVT(0.285)IT(0.007)T(0.003)FSR;AMS(0.965)PVT(0.034)ITTFSR;AMS(0.798)PVT(0.115)IT(0.039)T(0.039)FS(0.01)R 86.288 0.0001151 53943000.0 11075.5 11737.400000000001 10015.1 10487.4 14711.0 10549.9 10704.9 9942.6 16580.7 17364.0 17673.800000000003 True False 12944.773630022692 12334.783525511168 11435.391775930066 13056.813470797279 12547.031387543862 11666.283415543157 12649.841763529987 11351.993997935475 12825.197923937103 13441.460340178257 13284.907687934641 0.9743969573668276 0.9284809360560046 0.8607806726662989 0.9828305756806637 0.9444575515522085 0.8781606684507474 0.9521964367895893 0.8545030394336395 0.9653960889457255 1.0117842484058657 1.0 13.69750058264158 -8.972419108799153 12.48427949679315 0.9847534516742456 0.921690612918044 0.36590166351264064 0.041662468631934846 0.6628874120297502 298.53758830945367 0.006930291483615801 0.0072245214304931665 1.06556731655291e-09 8.972419108799153 -0.06306283875620156 AMS(ph)PVTITTFSR ddPTM_A549_PD325901_60min_R1 7 AMSPVTITTFSR 12 0 A0A075B6G6;Q7Z7B0-2;Q7Z7B0;Q7Z7B0-3 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 AMS(0.976)PVT(0.023)ITTFSR;AMS(0.99)PVT(0.009)IT(0.001)TFSR;AMS(0.792)PVT(0.181)IT(0.011)T(0.015)FS(0.001)R;AMS(0.603)PVT(0.396)IT(0.001)TFSR;AMS(0.783)PVT(0.152)IT(0.015)T(0.025)FS(0.025)R;AMS(0.985)PVT(0.014)ITTFSR;AMS(0.933)PVT(0.064)IT(0.001)T(0.001)FS(0.001)R 90.73100000000001 0.0001978 112856200.0 17631.699999999997 18415.5 17914.899999999998 19192.2 21923.5 19364.7 20124.2 21987.000000000004 20937.5 20435.5 21662.399999999998 True False 19421.657204228486 19967.438814202877 19130.71284504519 20377.65860535133 20383.668991969113 19207.000303545825 20890.037443384797 21548.452036532177 20057.569687117564 19145.19904245574 18998.06212926765 1.0222967517464985 1.051025029728787 1.0069823287699002 1.0726177473626812 1.072934115767884 1.0109978677223237 1.0995878053900268 1.134244739800882 1.0557692437597452 1.007744837983313 1.0 14.213564645522556 -2.0095698304738367 24.547072250885734 1.042122789726047 0.00293441269833572 0.0 0.04208896970333838 0.0 0.0 0.005960053722867761 0.0 0.009782056558565939 2.0095698304738367 -1.0391883770277113 AMS(ph)TTSISSPQPGK ddPTM_A549_MK2206_60min_R1 5 AMSTTSISSPQPGK 14 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 AMS(0.986)T(0.01)T(0.003)S(0.001)ISSPQPGK;AMS(0.98)T(0.017)T(0.003)S(0.001)ISSPQPGK;AMS(0.99)T(0.009)T(0.001)SISSPQPGK;AMS(0.954)T(0.034)T(0.01)S(0.002)ISSPQPGK;AMS(0.846)T(0.133)T(0.021)SISSPQPGK 206.18 4.438399999999999e-32 33636000.0 8321.4 9486.5 7813.29 6418.41 9980.0 7353.0 5485.18 7138.84 9738.599999999999 10878.6 10670.9 True False 9725.848881302947 9969.322329882392 8921.332009561216 7990.920738133377 8511.955220426064 8131.0895794736225 6481.76620468004 8150.792431780587 7532.822649348565 8421.116704484168 8021.021028142327 1.2125449923618339 1.242899413292187 1.1122439373067448 0.9962473243863418 1.0612059475422466 1.0137225112545039 0.808097395822589 1.016178913280859 0.9391351329112737 1.049880891090807 1.0 12.969570179506803 -6.071784136888412 1.090201273844564 0.9664896530047072 1.2593161385549791 0.6706205628763229 0.06598735139965556 0.2566560762508287 0.4819681516854764 0.009187730706024673 0.06169573949262755 8.476486274230593e-07 6.071784136888412 0.2928264855502719 AMS(ph)TTSISSPQPGK ddPTM_A549_PD325901_60min_R1 3 AMSTTSISSPQPGK 14 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 AMS(0.497)T(0.497)T(0.006)SISSPQPGK;AMS(0.498)T(0.498)T(0.005)SISSPQPGK;AMS(0.423)T(0.423)T(0.153)SISSPQPGK 217.2 1.1454999999999998e-38 75490000.0 14277.199999999999 17188.1 18227.1 15211.3 23603.5 19092.899999999998 19244.300000000003 20744.8 21170.5 28488.800000000003 30152.7 True False 15726.610833680867 18636.601508642187 19464.10061445631 16150.86745363118 21945.671587654473 18937.41375263083 19976.65236738503 20331.02869001923 20280.777507396873 26690.01230607098 26444.109053713742 0.5947113136516226 0.7047543734896566 0.7360467533589612 0.6107548346902235 0.8298888626982303 0.716129770685971 0.7554292083279531 0.7688301635998582 0.7669298846938726 1.0092989804216037 1.0 14.690658748937334 -14.9999999989975 0.1409235054868695 2.0163262907624135 0.6172513924089509 0.8259785624111611 0.053114051957650975 18.392413733408038 0.1737531310437096 5.183686638632943 0.11551443511286932 1.0000000023083402e-15 14.9999999989975 -1.3990748983534627 AMSPVT(ph)ITTFSR ddPTM_A549_PD325901_60min_R1 1 AMSPVTITTFSR 12 0 A0A075B6G6;Q7Z7B0-2;Q7Z7B0;Q7Z7B0-3 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 AMS(0.15)PVT(0.817)IT(0.013)T(0.019)FS(0.001)R 51.135 0.013033000000000001 10414000.0 2095.7 2361.1 3241.3 2790.3 2822.3 2832.1 2443.5 2894.4 3610.2 2867.4 2896.4 True False 2308.453921227201 2560.07818328117 3461.274109520287 2962.6504937689147 2624.0713844064303 2809.036316579763 2536.4887296345055 2836.6689213871255 3458.4758488086836 2686.351874646454 2540.1611617923613 0.9087824646520989 1.0078408495446622 1.3626198847469897 1.1663238295000309 1.033033424759105 1.105849644042932 0.9985542522997775 1.1167279320913424 1.361518277197952 1.0575517471304612 1.0 11.310704317070037 -8.536707134516321 24.95484450094756 1.1743172758422078 1.0907129325996616 0.01378613519353844 0.13841014806108298 603.239820667539 1088608.0138059123 0.028380316135416944 0.03218758323119254 2.9059816358965115e-09 8.536707134516321 -0.08360434324254618 AMST(ph)TSISSPQPGK ddPTM_A549_MK2206_60min_R1 1 AMSTTSISSPQPGK 14 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 AMS(0.304)T(0.65)T(0.043)S(0.003)ISSPQPGK 111.66 4.0918e-06 12401000.0 2950.0 4302.4 3239.9 3472.1 3446.1 2991.4 2413.5 3666.5 4370.7 5385.5 3947.3 True False 3447.8878794245816 4521.373782963793 3699.366538011185 4322.764655868492 2939.1832550210675 3307.9479624693854 2852.0017091499785 4186.2376031853255 3380.743428573697 4168.911809607806 2967.076470062151 1.1620488768030839 1.523848080285266 1.2468052560619358 1.4569104300092215 0.9905990912864813 1.1148846333576614 0.9612161121989006 1.4108964313608123 1.1394190418364516 1.405057082846429 1.0 11.534826394344359 -2.0000000011068466 0.09107221013691177 0.8663194787204279 2.2457101835837507 0.0 0.20191972765286503 117.97719082684242 0.7483426256957899 1.4290542427479989 20.38559020799873 0.009999999974513915 2.0000000011068466 1.3793907048633227 AMSTSQS(ph)PTR ddPTM_A549_MK2206_60min_R1 5 AMSTSQSPTR 10 0 Q15776 Q15776 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 1 AMST(0.001)S(0.016)QS(0.939)PT(0.043)R;AMSTS(0.002)QS(0.922)PT(0.076)R;AMST(0.002)S(0.054)QS(0.928)PT(0.016)R;AMS(0.011)T(0.031)S(0.119)QS(0.806)PT(0.033)R;AMST(0.001)S(0.006)QS(0.986)PT(0.008)R 94.791 2.5144e-06 50731000.0 4203.98 3730.78 3748.1099999999997 3657.82 4790.4 4199.89 3628.83 3897.0800000000004 5862.4 6380.0 6071.6 True False 4913.509046557071 3920.6607665502193 4279.648357907678 4553.986064205777 4085.7385058045083 4644.319572138648 4288.14143866365 4449.503024306958 4534.5757603291095 4938.7535688975595 4563.854152364741 1.0766139500779528 0.8590679359283965 0.937726801740629 0.9978377731124799 0.8952386227521099 1.017631023491891 0.939587746563235 0.9749441756374856 0.9935847222417349 1.0821453543467348 1.0 12.15603697264666 -8.511202183311331 0.9149711389567233 0.9988871688866949 0.9539321228886148 0.1349279499611188 0.0610151699403834 0.8272356140090406 1.3688781636628422 0.011039258454682135 0.01301508402048285 3.0817529237989802e-09 8.511202183311331 -0.04495504599808009 AMSTSQS(ph)PTR ddPTM_A549_PD325901_60min_R1 3 AMSTSQSPTR 10 0 Q15776 Q15776 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 1 AMST(0.001)S(0.016)QS(0.939)PT(0.043)R;AMSTS(0.001)QS(0.991)PT(0.008)R;AMSTSQS(0.988)PT(0.011)R 118.23 6.7555e-05 59912000.0 7363.7 6731.97 6147.1 6909.1 8525.4 7398.599999999999 7146.900000000001 7274.5 8416.3 8336.5 8470.3 True False 8111.2574031305685 7299.296737750768 6564.279171515184 7335.85941529542 7926.605315033338 7338.348254598015 7418.879190433739 7129.404390765148 8062.592179471643 7810.131967284007 7428.506797655647 1.091909534994353 0.9826061867580635 0.8836606535228314 0.9875281284807513 1.0670523068693814 0.9878631674556608 0.9987039646749807 0.9597358641463595 1.085358390197086 1.0513730659503195 1.0 12.858856528788822 -8.752491250868744 24.99777460043445 1.0403081300264039 0.9928197978575014 0.14524298515709744 0.0541947084619946 310.6096886401671 867727.4293225292 0.009962576097394355 0.011218000372795233 1.7681078370027345e-09 8.752491250868744 -0.04748833216890247 AMSTT(ph)SISSPQPGK ddPTM_A549_PD325901_60min_R1 1 AMSTTSISSPQPGK 14 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 AMS(0.301)T(0.301)T(0.35)S(0.046)IS(0.001)SPQPGK 199.13 2.5559e-31 16810000.0 5624.7 6735.8 5638.1 5747.0 7972.0 7071.1 6503.5 7837.7 8604.1 9698.9 10466.0 True False 6195.715403314706 7303.4495052921575 6020.735370649537 6101.979137616012 7412.074221906977 7013.515306015729 6750.994251351756 7681.370924943299 8242.499598563736 9086.509798775372 9178.74834944029 0.6750065659761241 0.7956912236010386 0.655942961004773 0.664794251384842 0.8075255949640407 0.7641036706756871 0.7355027062882081 0.8368647480581272 0.8979982111685582 0.989950857442285 1.0 13.16408172009099 -8.721932310723487 0.531487905567579 0.9905786980032928 0.7039215341139325 0.8362615271329041 0.046805301379441513 0.19949513434902166 0.1294998564352101 0.017055418113371114 0.017038596078614188 1.897001565440183e-09 8.721932310723487 -0.28665716388936024 AMSTTS(ph)ISSPQPGK ddPTM_A549_MK2206_60min_R1 1 AMSTTSISSPQPGK 14 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 AMS(0.044)T(0.112)T(0.297)S(0.547)ISSPQPGK 213.06 2.3296e-38 9266800.0 2167.4 2286.3 2158.7 1530.9 2419.7 2076.7 1151.4 1757.3 3022.2 2806.8 2035.2 True False 2533.204132157571 2402.662904423139 2464.8361201286275 1905.970568724712 2063.7653353572064 2296.4550155981055 1360.5944760369937 2006.4026565055428 2337.676525461694 2172.7419305927383 1529.8036713374936 1.6559014595270343 1.570569445896618 1.611210749660212 1.245892269991965 1.3490393401611298 1.5011436164160434 0.8893915614985014 1.3115425816381805 1.5280892373711485 1.4202750139128177 1.0 10.579130799957738 -13.426073835111833 0.2541686048043325 3.3567230752629533e-44 1.4671453339537266 0.032667971066016044 0.23198832745080353 18.51964595395085 0.4809650677815635 9.89457079737468 0.11463305538681305 3.749092578937677e-14 13.426073835111833 1.4671453339537266 AMSTTSIS(ph)SPQPGK ddPTM_A549_PD325901_60min_R1 1 AMSTTSISSPQPGK 14 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 AMSTTSIS(0.5)S(0.5)PQPGK 282.12 2.4113e-99 43079000.0 6193.9 6467.9 7256.2 6935.9 8152.4 6661.7 7046.7 6930.4 8277.3 7155.0 7424.4 True False 6822.70016829182 7012.972632097025 7748.649367075281 7364.314790428208 7579.803548253191 6607.449323879594 7314.866024602195 6792.167735206376 7929.433866086122 6703.232078920063 6511.2458671492905 1.0478332883594348 1.0770554169178375 1.1900409729832153 1.1310146999029544 1.1641095579718492 1.0147749691369623 1.1234203367296187 1.0431441038764024 1.2178059357414088 1.0294853267236286 1.0 12.668717900923706 AMSTTSISS(ph)PQPGK ddPTM_A549_MK2206_60min_R1 6 AMSTTSISSPQPGK 14 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 AMSTTSIS(0.039)S(0.961)PQPGK;AMSTTSIS(0.027)S(0.973)PQPGK;AMSTTS(0.001)IS(0.06)S(0.939)PQPGK;AMSTTS(0.003)IS(0.044)S(0.953)PQPGK;AMSTTSIS(0.05)S(0.95)PQPGK;AMSTTSIS(0.309)S(0.691)PQPGK 235.73 2.8210999999999994e-57 108390000.0 10362.0 11397.0 11344.900000000001 10939.0 15100.600000000002 12580.4 12812.7 11883.400000000001 17571.7 17371.399999999998 19167.600000000002 True False 12110.852273422886 11977.058619477119 12953.777411982805 13619.055491070365 12879.321743643855 13911.64957780634 15140.601739724852 13567.908341386194 13591.738006238906 13447.188675038728 14407.755921151997 0.8405786674691629 0.8312924431134777 0.8990836243252421 0.9452586208152137 0.8939158751805165 0.9655667165615067 1.0508646747337638 0.9417086474561368 0.9433625944679492 0.9333298501605609 1.0 13.814558025711504 -6.0528939037229295 0.7204709845565803 0.9754905531997405 0.8033275596598709 0.6342119253958269 0.03706333921014213 0.5902865113090978 0.38223083513802814 0.006352609211861491 0.066146880748873 8.853318661878091e-07 6.0528939037229295 -0.17216299353986964 AMSTTSISS(ph)PQPGK ddPTM_A549_PD325901_60min_R1 5 AMSTTSISSPQPGK 14 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 AMSTTSIS(0.013)S(0.987)PQPGK;AMSTTS(0.001)IS(0.154)S(0.845)PQPGK;AMSTTSIS(0.103)S(0.897)PQPGK;AMSTTS(0.001)IS(0.181)S(0.818)PQPGK;AMSTTSIS(0.113)S(0.887)PQPGK 302.2 1.6987999999999994e-135 173488000.0 28405.500000000004 25805.100000000002 28078.699999999997 27399.0 31934.8 29338.0 28760.699999999997 29273.9 28772.9 27673.300000000003 29162.299999999996 True False 31289.20544897611 27979.786340006336 29984.289432939637 29091.374002356217 29691.809817079167 29099.081054982897 29855.20417695891 28690.00909956973 27563.67507345503 25926.00311524509 25575.52197505085 1.2234043738970024 1.0940064631838546 1.1723823061046252 1.137469414338253 1.1609463863941385 1.1377707592192765 1.1673350872792714 1.1217760922946982 1.0777365599944995 1.0137037727142435 1.0 14.642476064021821 -9.268136237118245 0.589678415681404 1.0063174763389582 1.1588737185978137 0.7728978677949875 0.030858032917341155 0.20727706408252922 0.16306281735002295 0.0118670638075923 0.008041373657938208 5.393414058933623e-10 9.268136237118245 0.15255624225885556 AMTLS(ph)PQEEVAAGQMASSSR ddPTM_A549_MK2206_60min_R1 1 AMTLSPQEEVAAGQMASSSR 20 0 A0A494BZT8;Q9Y6A5 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 AMT(0.017)LS(0.982)PQEEVAAGQMAS(0.001)SSR 65.92399999999999 0.00045062 4718400.0 332.38 1022.0 674.62 645.92 885.01 1222.1 657.65 779.5 1490.6 1620.7 1292.6 True False 388.47761808920086 1074.0154346850584 770.2912601849149 804.1704289964501 754.826201365658 1351.4218108356747 777.136492240515 889.9965121186315 1152.9814799990738 1254.582744374966 971.6117460548569 0.39982803796534955 1.1053956881912992 0.7927973939308721 0.8276664339039875 0.7768804817670872 1.390907238743256 0.7998426278768332 0.9160001571948705 1.1866689391937186 1.2912387581449976 1.0 9.924236120951322 -4.585109308961233 0.4187268476811966 1.0738086569370067 1.6486320782938607e-12 0.3473657901040965 0.21641736357785482 7.421941861150545 0.5741448431665516 0.04468027358793675 4.491858757339864 2.5995052030766232e-05 4.585109308961233 -1.073808656935358 AMTLS(ph)PQEEVAAGQMASSSR ddPTM_A549_PD325901_60min_R1 6 AMTLSPQEEVAAGQMASSSR 20 0 A0A494BZT8;Q9Y6A5 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 AMT(0.016)LS(0.984)PQEEVAAGQMASSSR;AMT(0.006)LS(0.994)PQEEVAAGQMASSSR;AMT(0.005)LS(0.995)PQEEVAAGQMASSSR;AMT(0.02)LS(0.972)PQEEVAAGQMAS(0.002)S(0.003)S(0.003)R;AMT(0.03)LS(0.97)PQEEVAAGQMASSSR;AMT(0.054)LS(0.92)PQEEVAAGQMAS(0.007)S(0.009)S(0.009)R 117.55 1.14e-14 49247800.0 9788.300000000001 10833.5 10309.099999999999 11351.6 11486.400000000001 11021.9 10764.4 10887.300000000001 11637.599999999999 11363.3 11938.0 True False 10782.001010234397 11746.477065171564 11008.737519654338 12052.762550645888 10679.63488992879 10932.141300699303 11174.045132505695 10670.144260578383 11148.512142844145 10645.819298727094 10469.701681217091 1.0298288660485502 1.1219495476404109 1.0514853101692754 1.151204009209627 1.0200514986103495 1.0441693214919237 1.0672744527718696 1.0191450134363322 1.0648357023242465 1.016821646200862 1.0 13.353932714926078 -14.999999999828592 0.14137270984725292 0.7673541237171111 1.0907854863473063 0.26780485946769217 0.038012054674806284 56.59001734441047 0.5358436589757137 3.7011540506199374 0.08161080644850231 1.000000000394681e-15 14.999999999828592 0.32343136263019523 AMTVEKAS(ph)PVGDGNFR ddPTM_A549_MK2206_60min_R1 3 AMTVEKASPVGDGNFR 16 1 Q86YS7;H0YFC4 Q86YS7 C2CD5 C2 domain-containing protein 5 1 AMTVEKAS(1)PVGDGNFR;AMTVEKAS(1)PVGDGNFR;AMT(0.056)VEKAS(0.944)PVGDGNFR 105.32 2.4981e-07 40212000.0 11400.6 12432.8 11157.0 10395.699999999999 15081.599999999999 10990.3 9910.6 10423.5 16749.1 16834.0 16212.699999999999 True False 13324.742562090802 13065.576415217602 12739.230366551677 12942.646966680699 12863.11661847471 12153.286251229287 11711.227735115714 11901.063045629951 12955.455592816634 13031.187708279236 12186.639142243215 1.0933894412203047 1.0721230244627231 1.0453440212562777 1.062035793102045 1.055509765107148 0.9972631592168578 0.9609891290306974 0.9765664599337026 1.06308683153737 1.0693011876513612 1.0 13.573012690794785 -7.10260309207066 5.218555499292874 1.0183421124530612 1.0660088507078906 0.40350952686314245 0.032553247252562596 0.2360932869470992 9.728598151733127 0.005409704560100296 0.00952064035504658 7.895813976899405e-08 7.10260309207066 0.04766673825482948 AMTVEKAS(ph)PVGDGNFR ddPTM_A549_PD325901_60min_R1 3 AMTVEKASPVGDGNFR 16 1 Q86YS7;H0YFC4 Q86YS7 C2CD5 C2 domain-containing protein 5 1 AMTVEKAS(1)PVGDGNFR;AMTVEKAS(1)PVGDGNFR;AMTVEKAS(1)PVGDGNFR 99.059 6.7455e-07 24945200.0 10603.900000000001 10179.6 11856.3 11615.6 12868.3 12300.5 11344.9 11685.5 13145.0 12006.2 13158.5 True False 11680.4001218214 11037.470617309305 12660.939815723754 12333.069231058389 11964.475001224993 12200.328806217782 11776.636377667492 11452.423535402584 12592.561362968843 11248.126483009084 11540.087918604051 1.0121586771441444 0.9564459729561969 1.0971268074407605 1.0687153614467662 1.036775030278303 1.0572128126120548 1.0204979772018976 0.9924034908728779 1.0912015100567887 0.974700241657233 1.0 13.49436659480242 -5.7456684196375365 24.99991062829746 1.0439237751461676 0.9843023285943073 0.1981469031088211 0.039754176942398606 255.83207289960717 405534.41683997214 0.0054506564368529565 0.020963221690949326 1.7961044148245184e-06 5.7456684196375365 -0.0596214465518603 AMVDSQQKS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 AMVDSQQKSPVK 12 1 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-9;Q03001-8;H0YAT7;Q6P0N6;Q03001-3;A0A494C1D7;F6QMI7;E7ETB9 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 AMVDS(0.023)QQKS(0.977)PVK;AMVDS(0.01)QQKS(0.99)PVK 49.595 0.0070211 53783000.0 9436.7 9254.7 9222.3 8482.0 11853.2 9274.8 8184.099999999999 8669.9 11842.099999999999 12626.3 13463.8 True False 11029.38425483592 9725.72469998025 10530.160814685805 10560.09038077145 10109.6099818391 10256.25317988603 9671.045033293696 9898.884875455195 9159.883257947826 9774.010060653809 10120.366878023651 1.0898205952183608 0.9610051510187476 1.0404920040549144 1.0434493638469429 0.9989371041273306 1.0134270134176118 0.9556022177708146 0.9781152200075469 0.9050939919815049 0.9657762587518487 1.0 13.304973970323905 -7.63747579629937 1.706024004953582 0.9554111735483367 1.026174002765011 0.42443139117273354 0.03668051357660511 0.29909939207143105 1.7670034030420678 0.0069670640340245655 0.011328063951454748 2.3042213892247044e-08 7.63747579629937 0.07076282921667432 AMVDSQQKS(ph)PVK ddPTM_A549_PD325901_60min_R1 4 AMVDSQQKSPVK 12 1 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-9;Q03001-8;H0YAT7;Q6P0N6;Q03001-3;A0A494C1D7;F6QMI7;E7ETB9 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 AMVDS(0.02)QQKS(0.98)PVK;AMVDS(0.015)QQKS(0.985)PVK;AMVDS(0.001)QQKS(0.999)PVK;AMVDS(0.039)QQKS(0.961)PVK 79.771 0.00024401 68949500.0 14885.4 14149.9 15506.800000000001 15234.7 17247.6 15859.300000000001 16240.6 17495.600000000002 17323.8 17317.3 18331.0 True False 16396.554849947694 15342.361732078376 16559.184697963523 16175.712818485934 16036.188076989823 15730.14711893415 16858.644920197323 17146.63653296731 16595.740931137287 16223.8827226111 16076.403209783086 1.0199143823395636 0.954340441196572 1.0300304416280532 1.0061773524467472 0.9974984993677697 0.9784618433407899 1.0486577563530015 1.0665716895264823 1.0323043478430651 1.0091736634683477 1.0 13.972657046523759 -7.751542389473247 24.99978410946171 1.0225849620107688 0.9976052587056427 0.27081418156473347 0.025690344486045364 297.77329852378267 752170.3929508086 0.004268859836253006 0.006287992174341898 1.7719750824120794e-08 7.751542389473247 -0.02497970330512611 AMVDSQQKS(ph)PVKR ddPTM_A549_MK2206_60min_R1 3 AMVDSQQKSPVKR 13 2 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-9;Q03001-8;H0YAT7;Q6P0N6;Q03001-3;A0A494C1D7;F6QMI7;E7ETB9 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 AMVDS(0.009)QQKS(0.991)PVKR;AMVDS(0.139)QQKS(0.861)PVKR;AMVDS(0.011)QQKS(0.989)PVKR 71.531 0.0008478 84855000.0 10333.7 11692.0 10423.1 10057.099999999999 12443.599999999999 9584.199999999999 9182.6 9887.1 13136.4 15135.5 14658.900000000001 True False 12077.775925291458 12287.072859430244 11901.252310980088 12521.089951480375 10613.162923937245 10598.393682522934 10850.959558500348 11288.626702973846 10161.026374520212 11716.380037938723 11018.690564941617 1.0961171705574122 1.1151118898396388 1.0800967901618488 1.1363500842213476 0.9631963853949537 0.9618560045822551 0.9847775917244703 1.0244980232851888 0.9221627846460947 1.0633187281996064 1.0 13.427665167187227 -6.7679218278308175 24.99980993562693 0.9687124104046536 1.1055883253395709 0.6551710528828045 0.03968078500794326 50.25505122351257 193811.45057251112 0.004922506138339662 0.00946197187958254 1.7063895081824738e-07 6.7679218278308175 0.13687591493491724 AMVDSQQKS(ph)PVKR ddPTM_A549_PD325901_60min_R1 3 AMVDSQQKSPVKR 13 2 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-9;Q03001-8;H0YAT7;Q6P0N6;Q03001-3;A0A494C1D7;F6QMI7;E7ETB9 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 AMVDSQQKS(1)PVKR;AMVDSQQKS(1)PVKR;AMVDSQQKS(1)PVKR 98.507 3.288e-05 190540800.0 13176.6 13052.4 13792.7 12952.099999999999 15817.6 14989.5 14650.5 15400.599999999999 14422.9 16474.8 16166.2 True False 14514.278731899767 14152.37155540178 14728.755564242892 13752.121800646652 14706.626343757644 14867.43048175288 15208.032794561208 15093.422951463028 13816.755669985807 15434.578316393048 14177.859885985245 1.0237284645651683 0.9982022441476757 1.0388560532187376 0.9699716255653342 1.0372952238225377 1.0486371427925643 1.0726606777652166 1.0645769582179898 0.9745304143993984 1.0886395013432222 1.0 13.79135215719796 -8.779223156108037 24.96896989577926 0.9879726935628387 1.030913609132091 0.0 0.041108190731080206 215.49821514881918 302564.87681777857 0.005192901455813634 0.005534100291897016 1.6625581487433114e-09 8.779223156108037 0.04294091556925228 ANALLS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 ANALLSPPR 9 0 Q5D1E8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 1 ANALLS(1)PPR;ANALLS(1)PPR 57.148999999999994 0.01409 4379500.0 2297.7 2526.01 2319.59 2953.0 3420.6 2952.1 2547.3 2960.1000000000004 2624.8 3247.4 3245.3 True False 2530.9608125226587 2738.8857277328675 2477.0113262277996 3135.400103250407 3180.348856429381 2928.0590763656355 2644.238895436044 2901.0584833464713 2514.488783987875 3042.3586097952475 2846.1486736516867 0.8892581178042841 0.9623129505103477 0.8703028584412374 1.1016290653669905 1.1174218992393348 1.0287793829859406 0.9290585976464164 1.019292670900545 0.8834706378011227 1.0689387514995194 1.0 11.47479531024319 -8.729278508822269 24.970770387297186 0.9449721814347841 0.9921223734946198 0.0 0.08646521589251462 456.62512160266465 354538.9929126133 0.01465252582691696 0.016613761672272815 1.8651831834082398e-09 8.729278508822269 0.04715019205983573 ANALLS(ph)PPRAPSK ddPTM_A549_PD325901_60min_R1 1 ANALLSPPRAPSK 13 1 Q5D1E8 Q5D1E8 ZC3H12A Ribonuclease ZC3H12A 1 ANALLS(1)PPRAPSK 86.005 7.1454e-05 12601000.0 4083.1 3549.0 4017.2 3937.9 5439.2 4326.3 4534.5 4513.9 5209.3 4526.5 4208.1 True False 4497.613306180646 3848.0866852165846 4289.831349386017 4181.135139380212 5057.16935622133 4291.068047180194 4707.06287887361 4423.86672341395 4990.371236828725 4240.696017502676 3690.5303773437477 1.218690227776365 1.0426920501291843 1.162388846795949 1.132936112665079 1.370309640930586 1.162723947084452 1.2754434722365056 1.1987075761717534 1.3522097711116892 1.1490749523527588 1.0 11.849612449939178 -4.932620754537624 20.45378592328332 1.1808980738127939 2.1215032721863047 0.0069572029652514855 0.10883324165109699 348.9789830170754 989190.9050624393 0.018643659788061265 123715.35139901833 1.1678289726734256e-05 4.932620754537624 0.9406051983735109 ANAS(ph)PQKPLDLK ddPTM_A549_MK2206_60min_R1 5 ANASPQKPLDLK 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK 97.86 0.00016198 623722300.0 30950.3 37207.5 35952.9 34620.49999999999 46724.700000000004 37806.0 34688.7 36145.4 49667.6 49553.9 49965.7 True False 36173.95397781513 39101.2028239181 41051.56183970561 43102.52405417329 39851.558525835804 41806.60582640824 40991.18777219426 41269.12114064497 38417.96790285926 38359.63957332178 37557.83770683363 0.9631532640451583 1.0410930237552962 1.0930225046538369 1.1476306061765322 1.0610716952585595 1.1131260045570075 1.0914150088234695 1.0988151517875078 1.022901483379836 1.021348456552446 1.0 15.196826385580922 -8.877908653614638 4.804814717711419 1.0098634754017082 1.0790798287801158 0.27084876206391295 0.04480860418682225 0.1862164140685482 6.921813101915833 0.008066901872778465 0.008526347332432061 1.324620116987758e-09 8.877908653614638 0.06921635337840759 ANAS(ph)PQKPLDLK ddPTM_A549_PD325901_60min_R1 4 ANASPQKPLDLK 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK 139.67 1.7778e-09 1045353800.0 109385.29999999999 104316.9 108581.5 105806.90000000001 127894.90000000001 119856.0 121273.8 128325.7 118177.3 119004.0 128339.5 True False 120490.0151307979 113108.05126319248 115950.49354360219 112342.3519080952 118912.00343745241 118879.93247413015 125888.94082256997 125766.14324393576 113210.71905363083 111490.06713065035 112554.55511112088 1.0705032329597202 1.0049175810923436 1.030171488209683 0.9981146635707797 1.0564832611177315 1.056198324063957 1.1184704226166997 1.1173794176501481 1.0058297413362094 0.9905424708984937 1.0 16.780264918641098 -8.953035364544608 24.999992496613345 1.0025718353769937 1.054508790055993 0.329192878970914 0.0365433630831522 117.65909853962322 62631.93123124948 0.006826757944432697 0.007265584975772793 1.1142038004233594e-09 8.953035364544608 0.05193695467899939 ANASNS(ph)PEGNK ddPTM_A549_MK2206_60min_R1 2 ANASNSPEGNK 11 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 ANAS(0.016)NS(0.984)PEGNK;ANAS(0.106)NS(0.894)PEGNK 153.09 2.6758e-12 30725000.0 19139.2 13661.9 10552.7 6260.3 3156.3 2262.6 1831.0700000000002 2647.8 2987.9 19711.4 21246.0 True False 22369.429051485753 14357.232355307051 12049.231539760673 7794.073781035542 2692.0124511253266 2502.0268302076747 2163.7517172460134 3023.133758547416 2311.145420695849 15258.581049838145 15970.031840230144 1.4007128649007996 0.8990108785594099 0.7544901387990615 0.4880437220795937 0.1685665049423303 0.15667012159016572 0.1354882531790138 0.18930042148894363 0.1447176463902744 0.9554508846626228 1.0 13.963079568672818 -5.468520894370387 1.3335282885513275 0.46088964856730824 1.5756233574816865 0.49490773298974455 0.30448643545472937 0.7968187844805431 1.5965423880158542 0.056262953337559235 1.0765821151600856 3.4000014764110104e-06 5.468520894370387 1.1147337089143783 ANASNS(ph)PEGNK ddPTM_A549_PD325901_60min_R1 2 ANASNSPEGNK 11 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 ANAS(0.211)NS(0.789)PEGNK;ANAS(0.004)NS(0.996)PEGNK 181.77 1.6006e-18 68858000.0 20719.8 18577.6 14896.0 14306.1 17586.9 10938.6 9907.0 11329.4 15096.199999999999 17991.9 22215.7 True False 22823.258842889427 20143.199550092868 15906.932136924761 15189.755305489545 16351.656815511285 10849.519668281271 10284.016306318414 11103.42622925764 14461.759212449624 16855.888363483136 19483.309736925323 1.1714261668608665 1.0338694925080878 0.8164389085688809 0.7796291036066366 0.8392648393060836 0.5568622484976951 0.5278372332616492 0.5698942520127426 0.7422639894207136 0.8651450185353968 1.0 14.249951156325613 -2.9591735437861812 12.267910764991086 0.8289801803649585 1.2424924293234334 0.0 0.19814677849016418 0.0 0.0 0.028906004987846824 0.0 0.0010985667651626115 2.9591735437861812 0.41351224895847494 ANASNS(ph)PEGNKTK ddPTM_A549_MK2206_60min_R1 1 ANASNSPEGNKTK 13 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 ANAS(0.137)NS(0.847)PEGNKT(0.016)K 49.463 0.008454600000000001 14115000.0 2632.6 2078.5 1814.0 945.26 1114.7 771.52 673.04 835.56 1208.9 3161.1 3546.5 True False 3076.9185191095426 2184.286772008702 2071.2524769135734 1176.8487424343343 950.7291066341616 853.1617343064725 795.3226560291284 954.0031887951812 935.0860802166111 2447.005314520702 2665.8061715794115 1.1542168939036401 0.819371939076342 0.7769703960458676 0.4414607314593642 0.3566384971158209 0.3200389223350771 0.29834226678150544 0.3578666742413468 0.35077046868062434 0.9179231935947255 1.0 11.380356171815553 -5.471804754519204 1.538841076715206 0.573796174152753 1.2297208533202788 0.3872524026839179 0.23821953434498444 0.8300754305070136 2.4283196110761467 0.04433372171546414 0.7244295835463593 3.374389767795527e-06 5.471804754519204 0.6559246791675258 ANASNS(ph)PEGNKTK ddPTM_A549_PD325901_60min_R1 1 ANASNSPEGNKTK 13 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 ANAS(0.013)NS(0.985)PEGNKT(0.002)K 67.416 0.001224 34694000.0 2312.9 2141.6 1988.8 1901.4 1922.0 1929.2 1564.8 2113.4 1911.3 2855.2 3118.6 True False 2547.703905333011 2322.0801479458532 2123.7719276259363 2018.8451596072878 1787.0053505400415 1913.4892348242217 1624.3493202914158 2071.2465790697725 1830.9747077247898 2674.9221847285185 2735.031970434212 0.931507906625508 0.8490138956500758 0.7765071672229 0.738143166672665 0.653376402856577 0.6996222550628677 0.593905057729009 0.7573025110711751 0.669452762350747 0.9780222731011987 1.0 11.417341981781314 -10.817514777931894 1.0208165759804377 1.0027154330226182 0.7337148909604294 0.5341079483217681 0.08888806466269907 0.3518015393727142 0.6399733027915377 0.06918227936940134 0.01645754128393792 1.52224733381066e-11 10.817514777931894 -0.2690005420621888 ANDES(ph)NEHSDVIDS(ph)QELSK ddPTM_A549_PD325901_60min_R1 1 ANDESNEHSDVIDSQELSK 19 0 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 2 ANDES(0.932)NEHS(0.068)DVIDS(0.999)QELS(0.001)K 84.404 3.515e-05 2308200.0 613.15 467.77 458.37 540.6 324.33 564.27 427.36 453.11 411.36 655.4 546.2 True False 675.3965366228265 507.1906195389578 489.47774460272535 573.9916342083201 301.55017967775865 559.6747722031224 443.62341866036525 444.07236559208155 394.0719697429337 614.0179321487361 479.02086264707464 1.4099522365071486 1.0588069520317274 1.0218297004808221 1.1982601990160426 0.6295136667146165 1.1683724360361956 0.9261045880317138 0.9270418059416717 0.8226613921683652 1.2818187683009592 1.0 8.903944680354199 -2.0000000032586285 0.6295672353954361 0.9229068638668978 36.91659087444062 0.2529498798722921 0.18066644665781223 113.35991585772324 0.7254668466366327 0.022817224176980816 5673.815325473882 0.009999999924967307 2.0000000032586285 35.99368401057372 ANDES(ph)NEHSDVIDSQELSK ddPTM_A549_MK2206_60min_R1 2 ANDESNEHSDVIDSQELSK 19 0 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 ANDES(0.998)NEHS(0.002)DVIDSQELSK;ANDES(0.94)NEHS(0.06)DVIDSQELSK 126.32 1.4206e-15 8603300.0 2270.8 2226.3999999999996 1882.4699999999998 2257.0 2920.7 2270.6000000000004 1757.69 2262.0 3072.6 3157.8999999999996 3582.5 True False 2654.0555242702853 2339.714250276726 2149.4325524892483 2809.96510132058 2491.0688990278945 2510.8733848977035 2077.0395210921174 2582.645427084468 2376.6610059339555 2444.5281967431984 2692.8663780299585 0.9855875307901217 0.8688564235364732 0.7981950274345679 1.0434847878996092 0.9250622011368813 0.9324166269009616 0.7713117657964276 0.9590692832571492 0.8825766570982508 0.9077792409928491 1.0 11.394926928710253 -10.822354460572956 0.9660516674305736 1.0024512616108485 0.9044005372712153 0.0 0.07902116724057949 0.7993700407242655 1.2686210641024882 0.05618930419637229 0.01255094324185998 1.5053779118844373e-11 10.822354460572956 -0.09805072433963324 ANEAGGQVGPEAPRPPET(ph)SPEMR ddPTM_A549_MK2206_60min_R1 4 ANEAGGQVGPEAPRPPETSPEMR 23 1 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ANEAGGQVGPEAPRPPET(0.5)S(0.5)PEMR;ANEAGGQVGPEAPRPPET(0.871)S(0.129)PEMR;ANEAGGQVGPEAPRPPET(0.541)S(0.459)PEMR;ANEAGGQVGPEAPRPPET(0.555)S(0.445)PEMR 117.03 9.108100000000001e-16 213639000.0 14248.800000000001 17892.3 13503.5 13362.2 20605.5 15942.1 13944.2 13567.8 22153.4 23304.300000000003 23685.399999999998 True False 16653.649090286428 18802.94164580771 15418.499350607732 16635.939599851947 17574.458245940805 17629.08244049047 16477.68064335163 15491.077199644846 17135.690271710377 18039.84244446073 17803.661496215158 0.935405848613039 1.0561277886464526 0.8660296846177129 0.9344111380340805 0.9871260611013595 0.9901942049526272 0.9255220139326162 0.8701062533085152 0.9624812443975761 1.0132658637828955 1.0 14.119886355527854 -9.846749224277817 1.2612054185856338 0.9930855026116698 0.9484066943277755 0.1523322987497021 0.05167889824964462 0.63370826132549 2.034932013021231 0.014637292708032507 0.009481756310142095 1.4231503230721856e-10 9.846749224277817 -0.04467880828389437 ANEAGGQVGPEAPRPPET(ph)SPEMR ddPTM_A549_PD325901_60min_R1 4 ANEAGGQVGPEAPRPPETSPEMR 23 1 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ANEAGGQVGPEAPRPPET(0.871)S(0.129)PEMR;ANEAGGQVGPEAPRPPET(0.5)S(0.5)PEMR;ANEAGGQVGPEAPRPPET(0.642)S(0.358)PEMR;ANEAGGQVGPEAPRPPET(0.588)S(0.412)PEMR 121.26 5.2869e-16 285897000.0 21809.6 22454.699999999997 18750.4 21423.800000000003 25715.6 24831.600000000002 23141.6 23033.699999999997 22285.699999999997 25118.2 25414.8 True False 24023.69453662105 24347.036373776486 20022.914899314837 22747.099469020013 23909.4249700039 24629.379682490737 24022.266251569403 22574.2747839119 21349.109529609344 23532.232565301165 22288.94071769108 1.0778302495799215 1.0923370779326387 0.8983340730689071 1.0205554295797148 1.0727035112541987 1.1050044950293225 1.0777661691433615 1.0128015983278356 0.9578341923025631 1.0557806610622489 1.0 14.444040433668524 -8.520794789131678 6.217622701450459 0.9802396442573122 1.0470051098112336 0.07112776595898651 0.05829623474266815 0.17265803069123115 29.05068663140787 0.009523465037893251 0.011098724796079153 3.014430052604167e-09 8.520794789131678 0.06676546555392138 ANEVISK ddPTM_A549_PD325901_60min_R1 1 ANEVISK 7 0 P50990-2;P50990;P50990-3;H7C2U0 P50990-2 CCT8 T-complex protein 1 subunit theta 0 65.252 0.026907999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ANGLPAGPEPASEPGS(ph)PYPEGPR ddPTM_A549_MK2206_60min_R1 2 ANGLPAGPEPASEPGSPYPEGPR 23 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5;A0A5F9ZH45 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 ANGLPAGPEPAS(0.001)EPGS(0.999)PYPEGPR;ANGLPAGPEPAS(0.001)EPGS(0.999)PYPEGPR 106.42 2.7842e-10 8444100.0 2220.2799999999997 2896.3 2217.0299999999997 2825.3999999999996 4046.2 2816.6 3091.4 2596.8999999999996 4214.6 3605.0 4413.5 True False 2595.008983365697 3043.7092989024823 2531.438191230265 3517.6231268370275 3451.009339968728 3114.650742492236 3653.067364270249 2965.0185276727034 3259.999829333219 2790.627996218762 3317.5061435967104 0.7822167830418212 0.9174690768176277 0.7630545601599938 1.0603215109719006 1.0402420344057837 0.9388530443278859 1.1011486357971703 0.8937492198456477 0.9826658002202988 0.8411824652096265 1.0 11.695883421946569 -6.262069227350732 24.999848401310935 0.995802155257591 0.8305690319620249 0.44225936947413835 0.07945195380236841 27.459192305553934 1089939.782268047 0.008070682312176222 0.01985321052396324 5.469287744780336e-07 6.262069227350732 -0.16523312329556605 ANGLPAGPEPASEPGS(ph)PYPEGPR ddPTM_A549_PD325901_60min_R1 1 ANGLPAGPEPASEPGSPYPEGPR 23 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5;A0A5F9ZH45 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 ANGLPAGPEPAS(0.012)EPGS(0.987)PY(0.001)PEGPR 75.054 0.00011141 6177400.0 2093.6 2026.5 2005.7 1736.0 2761.7 2326.6 1604.6 2011.5 1688.6 1924.3 2710.8 True False 2306.1407307731383 2197.2802670023693 2141.818863253893 1843.2287772579418 2567.7277193477803 2307.65294098177 1665.6639310708115 1971.379054508777 1617.6340142646777 1802.7993695969067 2377.3887851770232 0.9700309621850177 0.9242410331462707 0.9009123272592584 0.7753165105978629 1.0800621822385623 0.9706670425005556 0.7006274873744658 0.8292203054041015 0.6804246845743519 0.7583107066195183 1.0 11.215162137703153 -7.696931108134447 24.99996569793965 0.8333244006066577 0.933828387316772 0.2777970130520504 0.10650019756506397 107.93747377886463 41829.85304468034 0.020903138542384108 0.0310043610977013 2.009411539040299e-08 7.696931108134447 0.10050398671011429 ANGSQPNSGS(ph)PQPAP ddPTM_A549_MK2206_60min_R1 2 ANGSQPNSGSPQPAP 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 ANGSQPNS(0.002)GS(0.998)PQPAP;ANGSQPNS(0.028)GS(0.971)PQPAP 104.97 5.3764e-06 18005400.0 3323.3 2970.6000000000004 3374.3 3392.6 4759.0 2510.2 2495.25 2773.4 5432.299999999999 5080.1 4706.2 True False 3884.1917931158328 3121.7908515415224 3852.826478968835 4223.787152299604 4058.9574042091785 2775.827697864094 2948.604625960838 3166.537943181285 4201.892723600543 3932.501881717319 3537.520655487671 1.097998335950457 0.882479893565784 1.0891318678216162 1.1939964635251936 1.1474017537996888 0.7846816932525945 0.8335229425125019 0.8951291742336855 1.1878072618691986 1.1116548183589892 1.0 11.788522856488623 -8.75999012808891 24.99997179991964 1.0886867576873385 0.9901413743129279 0.11727679170624383 0.1325618488386585 76.52147009837076 1320008.7125009813 0.02556031968374893 0.028233372560757114 1.7378403310018066e-09 8.75999012808891 -0.09854538337441054 ANINVENRYQSK ddPTM_A549_PD325901_60min_R1 1 ANINVENRYQSK 12 1 P61006-2 P61006-2 RAB8A Ras-related protein Rab-8A 0 53.327 0.012494 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ANITLS(ph)GK ddPTM_A549_PD325901_60min_R1 2 ANITLSGK 8 0 E9PLD3;A0A494BXY3;E9PRG8 E9PLD3 C11orf98 Uncharacterized protein C11orf98 1 ANIT(0.022)LS(0.978)GK;ANIT(0.054)LS(0.946)GK 56.403999999999996 0.018851 5102700.0 4095.0 4310.5 4226.9 3895.7 4733.8 4493.9 4347.7 4157.4 3972.4 4245.9 5204.299999999999 True False 4510.721385420329 4673.760962701068 4513.762852414558 4136.328541223366 4401.314218723439 4457.303168347795 4513.154102652727 4074.4773955827923 3805.4538423931117 3977.813149390172 4564.204092775849 0.9882821393898289 1.0240034993392657 0.9889485134021224 0.906254071278338 0.9643114394664714 0.9765784083588078 0.9888151386122449 0.8927027172233186 0.8337606656144769 0.8715239433938093 1.0 12.156147589227405 -8.254442490299127 24.55177678570023 0.9171450032732912 0.9758336764314474 0.3646067752665483 0.04698844896951305 638.4116754259071 2240157.600075938 0.010580721913954452 0.013510912621013135 5.566183373239115e-09 8.254442490299127 0.05868867315815618 ANKLDHVVTIIK ddPTM_A549_MK2206_60min_R1 1 ANKLDHVVTIIK 12 1 E9PKG1;Q99873-2;Q99873-3;Q99873;E9PQ98;E9PIX6;E9PNR9;H0YDE4;Q99873-5 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 0 63.537 0.024822 1154000.0 576.76 610.83 390.59 541.52 938.45 928.22 784.44 857.11 1156.4 972.18 764.97 False True 674.1029875718378 641.9186379341235 445.98153525781265 674.1924243097562 800.4052481571978 1026.4436242974314 926.9625940441721 978.6079672892877 894.4772463913379 752.5638627916662 575.0068369020449 1.1723390824423787 1.1163669659870101 0.7756108390999665 1.1724946227458648 1.3919925760701006 1.7850981213155397 1.612089691034551 1.7019066635132862 1.5555941059944582 1.3087911560256265 1.0 9.167435299755278 -6.590966123176185 4.404723883745986 1.3756073123881656 1.022393825123964 0.3927018218252092 0.23397816335186644 0.2596904575759627 9.905915334211777 0.04476865035978073 0.09683556169035587 2.5646840850238865e-07 6.590966123176185 -0.35321348726420165 ANKLDHVVTIIK ddPTM_A549_PD325901_60min_R1 2 ANKLDHVVTIIK 12 1 E9PKG1;Q99873-2;Q99873-3;Q99873;E9PQ98;E9PIX6;E9PNR9;H0YDE4;Q99873-5 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 0 ; 89.28299999999999 0.00098218 7584000.0 1410.78 1699.31 1950.65 1794.6 2265.1 2613.2 1695.25 2374.0 2507.8 1752.5 2137.3199999999997 False True 1554.0013470386557 1842.5168174289643 2083.0328392113493 1905.448366167687 2106.0071901707865 2591.918965603699 1759.7636664263953 2326.648707633027 2402.4058871094167 1641.8468509164784 1874.4431895877804 0.8290469167968783 0.9829675434624203 1.111280859714634 1.016541006285032 1.1235374866890102 1.382767415945907 0.9388194191222168 1.2412479186124032 1.2816637497761367 0.8759117694452754 1.0 10.872246385912531 -4.921522649395122 0.8405812034878442 1.14402110336784 0.4623750225651434 0.23475293368249983 0.14561061929648597 3.3702889312150197 1.1819882171426745 0.02117489523945099 2.4303250912831786 1.198056640319656e-05 4.921522649395122 -0.6816460808026966 ANKT(ph)PLRPLDPTR ddPTM_A549_MK2206_60min_R1 3 ANKTPLRPLDPTR 13 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ANKT(1)PLRPLDPTR;ANKT(0.995)PLRPLDPT(0.005)R;ANKT(0.792)PLRPLDPT(0.208)R 68.944 0.0066874 24491800.0 7038.599999999999 6923.0 7690.3 6835.2 9297.5 7246.200000000001 6730.5 6820.5 10312.099999999999 10599.5 9933.8 True False 8226.543602751814 7275.351129476187 8780.90017817445 8509.824306843784 7929.850066323775 8012.988074361726 7953.344728996866 7787.32676190523 7976.425815039881 8205.065588327543 7466.963301067409 1.1017254633588225 0.9743386750589988 1.1759666981246866 1.1396633361820994 1.061991300424658 1.073125412738571 1.0651377820298018 1.0429041161608528 1.0682288761081287 1.0988490578431827 1.0 12.866305925103804 -10.843345597164312 0.29188205087033203 0.9602979721306919 1.0907304508526783 0.0 0.056248396252388436 4.324041368382219 0.44405630219995185 0.1914756810404005 0.025600300763393972 1.4343475727954947e-11 10.843345597164312 0.13043247872198638 ANKT(ph)PLRPLDPTR ddPTM_A549_PD325901_60min_R1 3 ANKTPLRPLDPTR 13 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ANKT(0.776)PLRPLDPT(0.224)R;ANKT(1)PLRPLDPTR;ANKT(1)PLRPLDPTR 65.943 0.0091663 46317000.0 6651.4 6660.2 6982.299999999999 6711.700000000001 8102.599999999999 7841.5 6527.0 7499.5 7991.299999999999 7026.299999999999 7958.6 True False 7326.645231498121 7221.47842797393 7456.160865980777 7126.266465623348 7533.501328452521 7777.6414238410425 6775.388556711446 7349.916589256061 7655.453451494327 6582.658218884142 6979.742653722093 1.049701342153501 1.034633909335171 1.0682572747871477 1.0209927241118437 1.0793379788057265 1.1143163594568137 0.9707218292780937 1.0530354704892402 1.096810273859008 0.9431090149683102 1.0 12.768958129256996 -11.0987028191423 1.4478078959196679 1.0001328621831864 1.05879086765944 0.3275805314585061 0.04102311240545328 0.4788173662948118 1.8006421845807006 0.026802874565594825 0.005905586218031898 7.967043361330278e-12 11.0987028191423 0.05865800547625355 ANKTPLRPLDPT(ph)R ddPTM_A549_PD325901_60min_R1 1 ANKTPLRPLDPTR 13 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ANKT(0.285)PLRPLDPT(0.715)R 45.864 0.015059000000000001 21058000.0 2177.9 2207.1 2347.6 2258.0 2636.2 2406.3 2369.4 2376.7 2703.4 2985.7 2450.2 True False 2398.998804714759 2393.1000628181223 2506.9222532656104 2397.471531709928 2451.0424063962832 2386.7038906062235 2459.5688135854293 2329.294854014919 2589.7854993267397 2797.1823924572495 2148.8409330975137 1.1164152579952242 1.113670177237602 1.1666392866278517 1.1157045152960754 1.1406346410495596 1.1106936087474073 1.1446025509389415 1.0839773284927539 1.205201120025954 1.301716822950298 1.0 11.069342976583235 -10.998677126597656 1.2624697587316642 0.9996226558047977 1.1391316531637237 0.0 0.09427698189546067 0.2082921543787593 0.5882400023072246 0.025019134550760488 0.0056410818819934 1.0030506724351115e-11 10.998677126597656 0.13950899735892597 ANLIELEDDS(ph)HSGKR ddPTM_A549_MK2206_60min_R1 2 ANLIELEDDSHSGKR 15 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 ANLIELEDDS(0.529)HS(0.471)GKR;ANLIELEDDS(0.585)HS(0.415)GKR 92.211 6.0876e-06 6628700.0 807.49 810.62 799.74 569.5799999999999 994.65 676.3299999999999 633.51 940.9 951.1 1261.19 1258.55 True False 943.7745707649345 851.8770955620372 913.1551576002545 709.1271255694181 848.3383026048871 747.8987916884805 748.6105667137366 1074.2754563854003 735.6773685946052 976.2863030655036 946.0173007870488 0.997629292804425 0.900487860902025 0.965262640377238 0.7495921321729027 0.8967471333759999 0.7905762305470084 0.7913286216762868 1.1355769661840707 0.7776574149146648 1.0319962460023429 1.0 9.885722757622107 -11.157038976816283 1.5400111372758554 1.0000773212864558 0.8733579794037102 0.1465320507378749 0.11015495357156563 0.6165326882687293 2.6198258469661684 0.0789211909675515 0.01673325259258661 6.965639964726171e-12 11.157038976816283 -0.12671934188274558 ANLIELEDDSHS(ph)GKR ddPTM_A549_PD325901_60min_R1 2 ANLIELEDDSHSGKR 15 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 ANLIELEDDS(0.111)HS(0.889)GKR;ANLIELEDDS(0.026)HS(0.974)GKR 118.24 1.7138e-07 10820300.0 1230.6 1370.9699999999998 1016.71 1444.67 1504.9 1496.95 1096.48 1174.6 1456.94 1622.65 1262.23 True False 1355.5296060801618 1486.5064533196337 1085.7100545738965 1533.9039848163789 1399.2010156231581 1484.7593355121912 1138.2071464168791 1151.171681544125 1395.7098784453283 1520.195602076819 1106.9837119352203 1.2245253398628924 1.3428440159439516 0.9807823212465039 1.3856608442185838 1.2639761547864925 1.3412657471866019 1.028205866215569 1.0399174523820731 1.260822416262439 1.3732772991024635 1.0 10.112418279244821 -7.76220099605257 24.99995385380412 1.112252067524288 1.2541102977495944 0.1277079210568094 0.1425610041618605 25.2642607503606 829313.6107701736 0.020746014525599273 0.02959136244309807 1.729015967245274e-08 7.76220099605257 0.14185823022530641 ANLPQSFQVDTSK ddPTM_A549_MK2206_60min_R1 1 ANLPQSFQVDTSK 13 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 147.71 3.7106e-12 1261200.0 1899.2 2268.4 2013.8 2286.9 2844.8 2212.2 2281.8 2321.9 3835.6 3278.9 3526.4 False True 2219.738529018022 2383.851870880221 2299.387121283658 2847.190602662842 2426.333688483772 2446.293535660487 2696.373523902391 2651.0364355205247 2966.8427241945856 2538.1942127050493 2650.69755631119 0.8374167485584787 0.8993300141709409 0.8674649115697571 1.074128806541437 0.9153566700609741 0.922886705741277 1.0172316783114121 1.0001278452943558 1.1192686684041595 0.9575570802718418 1.0 11.37215635324454 -6.194909804524306 0.4503850564287485 1.0528980437708073 0.7978107405426309 0.3664720171861906 0.06584987748938734 1.5012636875162186 0.3387652679407813 0.016269933886169548 0.17597849961162035 6.383960562773408e-07 6.194909804524306 -0.2550873032281764 ANLPQSFQVDTSK ddPTM_A549_PD325901_60min_R1 1 ANLPQSFQVDTSK 13 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 182.08 1.2274000000000002e-24 2583900.0 3403.6 3684.0 3864.9 4112.3 4447.2 4354.0 3823.1 4013.7 4377.3 3794.3 4144.3 False True 3749.130966402109 3994.463608999127 4127.19535553172 4366.307431289077 4134.844014007117 4318.5424675641 3968.5901625805905 3933.643604813264 4193.337303470789 3554.72725046071 3634.577372882223 1.0315177204300496 1.0990173544803405 1.1355365238129052 1.2013246612567203 1.1376409386294568 1.1881828406749508 1.0918986598525746 1.0822836333496133 1.1537344987501172 0.9780304243851626 1.0 11.827571902591083 -10.851154270107042 0.8356071807137225 0.9903061443196015 1.1286883247375286 0.5491800702741214 0.04685030918695004 0.5019444958489094 0.5469683547442263 0.047068849924371 0.008695186901635184 1.408788279688577e-11 10.851154270107042 0.13838218041792705 ANLQQAIVT(ph)PLKPVDNTYYK ddPTM_A549_MK2206_60min_R1 2 ANLQQAIVTPLKPVDNTYYK 20 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 ANLQQAIVT(1)PLKPVDNTYYK;ANLQQAIVT(0.997)PLKPVDNT(0.003)YYK 180.37 4.8015e-36 50791000.0 6312.3 7350.3 7071.400000000001 6719.5 9089.1 7163.599999999999 5961.200000000001 6389.7 10393.599999999999 9709.7 10233.3 True False 7377.661919081959 7724.398874330315 8074.230851844895 8365.77780164982 7752.10543025796 7921.647397187172 7044.272876977364 7295.459542635555 8039.466195168633 7516.272026320484 7692.089185287923 0.9591232942530951 1.0042003788911065 1.0496798278532529 1.0875820079739078 1.0078023334785073 1.0298434152763474 0.9157814876159277 0.9484366817520822 1.0451602941038582 0.9771431200636997 1.0 12.90915977464446 -6.917140187482832 24.99973832252823 1.0079270723359672 1.028188518912565 0.03173128579223672 0.04694487152004095 91.08109894221872 27471.674468868736 0.007322558551619263 0.013838334759988665 1.2102074232736648e-07 6.917140187482832 0.020261446576597786 ANLQQAIVT(ph)PLKPVDNTYYK ddPTM_A549_PD325901_60min_R1 2 ANLQQAIVTPLKPVDNTYYK 20 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 ANLQQAIVT(0.999)PLKPVDNT(0.001)YYK;ANLQQAIVT(0.999)PLKPVDNT(0.001)YYK 155.05 4.5021e-27 97738000.0 8329.1 8973.4 9743.8 9760.5 10610.7 10361.1 10087.099999999999 10783.0 11180.5 9696.8 11142.4 True False 9174.664100440654 9729.619910150039 10405.072862229283 10363.383917296174 9865.4410369278 10276.722636811757 10470.970110372911 10567.924605900143 10710.622466236075 9084.542393133755 9771.955437493161 0.938876989270662 0.9956676503885099 1.0647892255327904 1.0605230430681063 1.0095667238796393 1.0516546767479003 1.0715327323534205 1.0814544410787013 1.0960572359081198 0.9296545047962529 1.0 13.254431569240014 -5.493584932577436 2.8865386503737502 1.0503368052816582 0.9396822262911319 0.291990206691774 0.04547758258590846 0.20140653316954582 2.990828702417496 0.0052448335277923705 0.03979206558672454 3.20933511086178e-06 5.493584932577436 -0.11065457899052633 ANLS(ph)LLR ddPTM_A549_PD325901_60min_R1 1 ANLSLLR 7 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 ANLS(1)LLR 57.55 0.034901999999999996 2417000.0 1020.8 1226.5 1138.0 810.58 1288.1 992.55 1079.2 1254.1 1193.9 1378.0 1532.6 True False 1124.4308645267583 1329.8614594021235 1215.231523349917 860.6476856392528 1197.6282997037613 984.4670018789031 1120.2695465608995 1229.0859916775823 1143.7245348990873 1290.9928448290489 1344.0999159518603 0.8365679152137009 0.9894066978349199 0.9041229070305524 0.6403152588769877 0.8910262440241496 0.7324358778653196 0.8334719266517852 0.9144305249116634 0.8509222575831561 0.9604887475309436 1.0 10.392424671953142 -10.531198679113826 0.575238246342481 1.0170608846480809 0.8387645719112236 0.2619361282646817 0.08875180719760235 1.0881282843447977 0.558859172651694 0.0998638768754732 0.020010555862056398 2.94307494090896e-11 10.531198679113826 -0.1782963127368573 ANLSLLR ddPTM_A549_PD325901_60min_R1 2 ANLSLLR 7 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 89.75200000000001 0.034947000000000006 5459600.0 1746.32 1672.3200000000002 2065.28 2089.85 2421.17 2725.0 1744.26 2442.29 2181.06 2043.4499999999998 2466.47 False True 1923.6051208271629 1813.2522754075496 2205.442320337537 2218.935288106286 2251.115371783057 2702.8085034708693 1810.6387687956963 2393.5766100105593 2089.397633040459 1914.4262182626405 2163.109826241541 0.889277602778716 0.8382617717372779 1.0195702010052579 1.025807964619967 1.0406847329127193 1.249501283144309 0.8370535544844376 1.1065441897462323 0.965923046390502 0.8850342201944527 1.0 11.078891200887373 -5.764824383734357 24.972890725326796 1.008061544480445 0.8637696641283379 0.23917591175826391 0.10314378806220581 76.19107302419616 562122.3568358248 0.012436273406524355 0.041104717527819704 1.718603200641079e-06 5.764824383734357 -0.14429188035210716 ANLYPPSNTPGDALS(ph)PGGGLRPNGQTKPLPALK ddPTM_A549_MK2206_60min_R1 2 ANLYPPSNTPGDALSPGGGLRPNGQTKPLPALK 33 2 Q9GZT9;Q9GZT9-2 Q9GZT9 EGLN1 Egl nine homolog 1 1 ANLYPPSNTPGDALS(0.998)PGGGLRPNGQT(0.002)KPLPALK;ANLYPPSNTPGDALS(1)PGGGLRPNGQTKPLPALK 123.9 2.8995999999999998e-30 17542100.0 2914.8999999999996 3729.1 3530.2 3910.6 4199.1 3622.2 3011.8 2816.7 5645.7 5482.8 5511.1 True False 3406.8638575371883 3918.8952617260775 4030.83544321957 4868.697175553502 3581.417952514135 4005.498799778236 3559.005074629339 3215.9758507819743 4366.957964330317 4244.231672030025 4142.541771377782 0.8224090535613567 0.9460122499676518 0.9730343508108888 1.1752922346355015 0.864546008264626 0.966918143699498 0.8591355913945647 0.7763291303426886 1.0541735498005358 1.0245477067617887 1.0 12.016300529617745 ANLYPPSNTPGDALS(ph)PGGGLRPNGQTKPLPALK ddPTM_A549_PD325901_60min_R1 3 ANLYPPSNTPGDALSPGGGLRPNGQTKPLPALK 33 2 Q9GZT9;Q9GZT9-2 Q9GZT9 EGLN1 Egl nine homolog 1 1 ANLYPPSNTPGDALS(1)PGGGLRPNGQTKPLPALK;ANLY(0.001)PPS(0.027)NT(0.04)PGDALS(0.768)PGGGLRPNGQT(0.163)KPLPALK;ANLYPPSNTPGDALS(0.997)PGGGLRPNGQT(0.003)KPLPALK 162.07 1.2566999999999998e-51 42926200.0 7525.5 6701.1 6816.9 6640.6 9111.9 7665.0 7689.8 8410.5 8216.2 7322.5 7922.8 True False 8289.483220019705 7265.825214512494 7279.535827349779 7050.774780103163 8471.911578348498 7602.578781322647 7982.439547020019 8242.745979590389 7870.901686605147 6860.156100334336 6948.3458267671995 1.1930153487879123 1.0456913624710884 1.047664582166698 1.0147414875266247 1.2192702823903852 1.0941566483399743 1.1488258854746647 1.1862889650421191 1.132773451816974 0.9873078098540908 1.0 12.762453845006576 -10.671914917923296 0.9910044255630162 1.0015692074062623 1.1175557283857298 0.36893159802450093 0.06309385242061591 0.5109657457626237 0.9110746913439163 0.0402798262636675 0.011276061706217278 2.1285560078242824e-11 10.671914917923296 0.11598652097946749 ANNLHSGDNFQLNDS(ph)EIER ddPTM_A549_MK2206_60min_R1 2 ANNLHSGDNFQLNDSEIER 19 0 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VUA7 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 ANNLHSGDNFQLNDS(1)EIER;ANNLHSGDNFQLNDS(1)EIER 188.51 3.6674999999999997e-44 40025000.0 1754.1499999999999 2271.99 1617.46 1336.97 2470.43 2033.1100000000001 1506.31 2153.01 3158.5 3490.8 2921.4 True False 2050.2076351500427 2387.624586546091 1846.8401495637424 1664.5277100188644 2107.0330195588313 2248.2523507308083 1779.9870290075435 2458.2057608165915 2443.104793088069 2702.225855534107 2195.935753461751 0.9336373488696209 1.0872925506960551 0.8410264948108422 0.7580038292991239 0.9595148748032494 1.0238242841060279 0.8105824709131443 1.1194342807804776 1.1125575004809098 1.2305577935393701 1.0 11.100620130663668 -8.274221921894396 24.985638493767205 1.0596084462141184 0.9196656740471664 0.41636405378118724 0.10621948275361558 701.6220576484469 1371436.1318338078 0.01615873344287122 0.019599870666216247 5.318364245734335e-09 8.274221921894396 -0.13994277216695206 ANNLHSGDNFQLNDS(ph)EIER ddPTM_A549_PD325901_60min_R1 2 ANNLHSGDNFQLNDSEIER 19 0 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VUA7 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 ANNLHSGDNFQLNDS(1)EIER;ANNLHSGDNFQLNDS(1)EIER 188.08 3.9376999999999997e-44 61845000.0 5178.7 6006.6 5728.9 5631.9 6035.6 5554.5 5220.5 6109.2 6045.6 6406.1 6334.5 True False 5704.437811642555 6512.797262164533 6117.697604674287 5979.769672027074 5611.680277689638 5509.265993588605 5419.168984267216 5987.347213425313 5791.524456140314 6001.617752728134 5555.396657703944 1.0268281750380377 1.1723370379202203 1.1012170654260254 1.0763893274361662 1.010131341370133 0.9916962429583913 0.9754783174217067 1.0777533239003487 1.0425042194077934 1.0803220944458383 1.0 12.439674208998733 -6.597264994484062 3.318842312846826 1.0187622072892868 1.1058853675423326 0.35618223855377984 0.04435202380420098 0.15702315249143062 3.4735835844912257 0.005727214792221507 0.012879871472433998 2.5277551594931133e-07 6.597264994484062 0.08712316025304578 ANNSQEPS(ph)PQLASSVASTR ddPTM_A549_MK2206_60min_R1 2 ANNSQEPSPQLASSVASTR 19 0 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 ANNSQEPS(1)PQLASSVASTR;ANNSQEPS(0.999)PQLASSVASTR 146.78 9.0324e-21 13400500.0 4803.6 5931.2 5070.9 4870.7 6650.900000000001 5543.9 4752.4 4846.2 7008.7 7996.9 7779.299999999999 True False 5614.330243255563 6233.072745796496 5790.029870551841 6064.021718654035 5672.5614203939585 6130.551818257014 5615.849563937999 5533.163690865054 5421.240640594058 6190.394735911742 5847.485112242416 0.9601273257628796 1.0659407636193559 0.9901743671702069 1.0370307238505445 0.9700856541759749 1.0484082816084412 0.9603871503974486 0.9462467342209573 0.9271063605179664 1.0586422397128303 1.0 12.513600568127968 -7.789961779860007 24.685316765644984 0.9625923247452659 1.0126605864119222 0.07554962971393253 0.044665213685600356 174.1970241667509 150761.8896953885 0.005778022071477391 0.007984327244640554 1.621952831239191e-08 7.789961779860007 0.050068261666656344 ANPFGGASHAK ddPTM_A549_PD325901_60min_R1 2 ANPFGGASHAK 11 0 D6RD47;P62266;D6RDJ2;D6RIX0;D6R9I7 D6RD47 RPS23 40S ribosomal protein S23 0 ; 119.74 1.4297e-05 25527000.0 6615.8 6993.1 6472.8 7087.6 8394.4 7582.8 7917.200000000001 7659.0 8161.2 8632.7 7862.9 False True 7287.431145705452 7582.433079286582 6912.0831321083915 7525.384954892509 7804.806303107873 7521.04819086933 8218.493378458077 7506.235236630736 7818.213145337498 8087.629848734197 6895.81314702981 1.0567906917321739 1.0995705535542992 1.0023594005132794 1.091297689545702 1.1318181245194538 1.0906687914113251 1.1918091751076487 1.0885206829978926 1.1337623248543194 1.1728319309547606 1.0 12.75150496751345 -3.5097574205091293 16.612754529848395 1.0788580420857141 0.5313858786520201 0.0 0.0608892550177446 0.0 0.0 0.008431155586517122 0.0 0.00030920220298408875 3.5097574205091293 -0.547472163433694 ANPQERDGVY(ph)DVPLHNPPDAK ddPTM_A549_MK2206_60min_R1 2 ANPQERDGVYDVPLHNPPDAK 21 1 A0A087WUD2;Q14511-3;Q14511 A0A087WUD2 NEDD9 Enhancer of filamentation 1;Enhancer of filamentation 1 p55 1 ANPQERDGVY(1)DVPLHNPPDAK;ANPQERDGVY(1)DVPLHNPPDAK 88.071 1.0858e-06 8468700.0 1685.29 2272.5 1896.8600000000001 1912.56 2556.9 1863.0 1586.06 1758.17 2825.9 3002.5 2526.9 True False 1969.7257506154083 2388.160543367706 2165.8632708700566 2381.1372858580808 2180.783397104949 2060.141423440687 1874.2265717068226 2007.395981669806 2185.8381620350074 2324.233164673187 1899.4009911078585 1.0370247040181502 1.257322995274826 1.140287533285312 1.2536253782142344 1.1481427077875586 1.0846269076858142 0.9867461270585351 1.056857394024501 1.1508039493862112 1.2236663956448384 1.0 10.89132879615937 -7.228015775817207 3.6646902558597563 1.0650545704418022 1.1777712379942815 0.18322182500247985 0.08348220855944741 0.2177215276255347 6.25358547309543 0.011371248118470005 0.019822862483810065 5.915401459938404e-08 7.228015775817207 0.11271666755247933 ANPQERDGVY(ph)DVPLHNPPDAK ddPTM_A549_PD325901_60min_R1 2 ANPQERDGVYDVPLHNPPDAK 21 1 A0A087WUD2;Q14511-3;Q14511 A0A087WUD2 NEDD9 Enhancer of filamentation 1;Enhancer of filamentation 1 p55 1 ANPQERDGVY(1)DVPLHNPPDAK;ANPQERDGVY(1)DVPLHNPPDAK 92.29 7.0915e-07 25875000.0 4024.2 4914.1 4835.3 4273.8 5197.9 5503.200000000001 5422.0 4909.0 5396.1 6157.7 5962.6 True False 4432.733821540538 5328.228453035448 5163.4525350209615 4537.782919495966 4832.817435781519 5458.383763780145 5628.337177032245 4811.086143963999 5169.320682443226 5768.901771120341 5229.238000035603 0.8476825536551134 1.0189301869601595 0.9874196842801582 0.8677713501403207 0.9241915238412584 1.043820106054263 1.0763207138389808 0.9200357956419737 0.9885418644949858 1.103201225700774 1.0 12.352385018196854 -7.238763360772831 24.19904414061042 0.9981383330240902 0.9340059433585827 0.29609411468580826 0.06566673044615602 620.4321610814308 662102.8340714854 0.008233646087899876 0.014253700924585219 5.770808186669778e-08 7.238763360772831 -0.0641323896655075 ANQIS(ph)PSNSSLK ddPTM_A549_MK2206_60min_R1 1 ANQISPSNSSLK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.49)PS(0.49)NS(0.015)S(0.005)LK 77.42 0.0010738 16413000.0 8766.5 9742.3 9711.2 9001.3 11914.0 9439.9 9325.2 9825.2 15999.0 15280.0 15736.0 True False 10246.070879652743 10238.141457272257 11088.394186220008 11206.618904083716 10161.466382380368 10438.82395230152 11019.468132656059 11217.95218841306 12375.252045153085 11828.237387579116 11828.316908493907 0.8662323607761173 0.8655619845559137 0.9374448006425529 0.9474398590078568 0.8590796527512232 0.8825282610415525 0.9316175934331777 0.948398007526959 1.0462394726900177 0.9999932770726887 1.0 13.529957181839276 -8.444342515871618 2.1880527591280754 1.0216686102607848 0.8968813430723822 0.7249957594040064 0.03132228229243617 0.11442282076124315 1.07589973126414 0.005913631252606876 0.007132697988695734 3.5946572280288765e-09 8.444342515871618 -0.1247872671884026 ANQIS(ph)PSNSSLK ddPTM_A549_PD325901_60min_R1 1 ANQISPSNSSLK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.942)PS(0.051)NS(0.003)S(0.003)LK 138.55 1.4362e-08 32396000.0 17762.0 16332.0 16928.0 18049.0 21147.0 17524.0 17358.0 20431.0 18875.0 22140.0 23151.0 True False 19565.1851643067 17708.354957158976 18076.835876333396 19163.8457377469 19661.707673189536 17381.29035406369 18018.56818866207 20023.487677190555 18081.749389580596 20742.07662156395 20303.573766280533 0.9636325796397418 0.8721792114533252 0.8903277858578166 0.9438656444597722 0.9683865461085975 0.8560704905522559 0.887457961641545 0.9862050842716599 0.8905697882414245 1.0215973237190226 1.0 14.309446067605494 -10.90736079470617 0.9519011235145051 1.0044728675190326 0.9148757445552526 0.4194147918129737 0.041584429186424646 0.5480963259148511 0.8052434528776788 0.03617576681844739 0.007012065728783477 1.2377678706112544e-11 10.90736079470617 -0.08959712296378008 ANQIS(ph)PSNSSLKNPQAGVPPFSSLK ddPTM_A549_MK2206_60min_R1 1 ANQISPSNSSLKNPQAGVPPFSSLK 25 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.25)PS(0.25)NS(0.25)S(0.25)LKNPQAGVPPFSSLK 103.68 2.2525e-12 9208300.0 1838.4 2361.5 2025.2 2502.1 3731.4 2326.7 2434.8 2174.0 3276.3 3779.0 3375.2 True False 2148.676975435306 2481.6902632179713 2312.403812704172 3115.114612323536 3182.516002955692 2572.909849661538 2877.171643438315 2482.1711575957706 2534.2232811760127 2925.321275370514 2537.0446892189025 0.8469212168654522 0.9781815329323295 0.911455688002133 1.227851691206357 1.2544185825656524 1.0141365899446089 1.1340642345264047 0.9783710819693814 0.9988879155125334 1.1530428643222492 1.0 11.308933216892735 ANQISPS(ph)NSSLKNPQAGVPPFSSLK ddPTM_A549_MK2206_60min_R1 1 ANQISPSNSSLKNPQAGVPPFSSLK 25 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.204)PS(0.265)NS(0.265)S(0.265)LKNPQAGVPPFSSLK 114.61 2.6456999999999997e-17 9117100.0 2331.0 2244.4 2648.9 2365.4 3465.6 2677.3 2998.0 1937.5 4184.9 3092.8 3442.4 True False 2724.415812521594 2358.630373392511 3024.5538512107837 2944.9231061868427 2955.8148308525597 2960.610108952092 3542.6977932594314 2212.1465583448976 3237.0268319120623 2394.134331957113 2587.557074593254 1.0528910992040061 0.9115278640813251 1.168883917927191 1.138109429586114 1.1423186989284837 1.144171905625494 1.369128367464636 0.8549170103591364 1.250997268309879 0.9252488980686364 1.0 11.337374969621694 -5.768441762678665 24.994126080450425 1.1269864065968953 0.9822094735519098 0.1010733816422511 0.14053731619864782 201.00553241052802 717475.1474730535 0.018071776244651023 0.057980139394850576 1.704347850883199e-06 5.768441762678665 -0.1447769330449855 ANQISPS(ph)NSSLKNPQAGVPPFSSLK ddPTM_A549_PD325901_60min_R1 2 ANQISPSNSSLKNPQAGVPPFSSLK 25 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.033)PS(0.322)NS(0.322)S(0.322)LKNPQAGVPPFSSLK;ANQIS(0.209)PS(0.264)NS(0.264)S(0.264)LKNPQAGVPPFSSLK 135.41 2.0131e-24 40783000.0 5022.1 5826.9 6089.1 6388.4 6648.4 6382.700000000001 7140.1 6502.8 6294.9 6568.5 6387.5 True False 5531.939894925381 6317.9533125073285 6502.342942732852 6782.996958890919 6181.439319734872 6330.721407377439 7411.820412712637 6373.096552652084 6030.347244104416 6153.763789012778 5601.877993698627 0.9875152406296751 1.1278277248476658 1.160743406059027 1.2108433933264693 1.1034583985385213 1.1301069774276886 1.3230956513244232 1.1376714308703217 1.0764867158634588 1.0985179962746332 1.0 12.451694847188621 -9.143029196925877 1.5855029175788782 1.0245076589509945 1.1522224017063047 0.17741114251185086 0.08023977204344263 0.2866281611927145 1.4836865666118166 0.016613389917832597 0.015439575964098746 7.194006122213002e-10 9.143029196925877 0.12771474275531025 ANRDQDS(ph)SDDER ddPTM_A549_PD325901_60min_R1 3 ANRDQDSSDDER 12 1 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 ANRDQDS(0.5)S(0.5)DDER;ANRDQDS(0.5)S(0.5)DDER;ANRDQDS(0.5)S(0.5)DDER 87.001 0.00015614 18423600.0 676.45 631.04 433.76 776.68 653.9 592.0899999999999 393.03 289.18 745.58 450.52 784.77 True False 745.1227060238302 684.2199554350725 463.1975620107733 824.6537596317393 607.972319832536 587.2682153468137 407.98697172426824 283.4120780426785 714.2458654242917 422.07409031377597 688.2482650669068 1.0826365191801748 0.994147010844346 0.6730094146561262 1.1981922824775622 0.8833619359337332 0.8532796160259459 0.5927904107169911 0.4117875662427236 1.0377735792110678 0.6132584878695551 1.0 9.426785257861054 -2.0124284869656046 15.776243019531499 0.9316780153296931 0.8943085464637204 0.0 0.2478190217109103 0.0 0.0 0.03134457347548017 0.0 0.009717879577183803 2.0124284869656046 -0.0373694688659727 ANRDQDS(ph)SDDERALEDWVSSETSALPR ddPTM_A549_PD325901_60min_R1 2 ANRDQDSSDDERALEDWVSSETSALPR 27 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 ANRDQDS(0.5)S(0.5)DDERALEDWVSSETSALPR;ANRDQDS(0.5)S(0.5)DDERALEDWVSSETSALPR 97.243 5.1976e-10 3962700.0 824.3399999999999 676.38 707.3399999999999 916.75 757.58 903.0 829.54 844.79 821.12 1045.78 1260.5900000000001 True False 908.0263899529662 733.3809163558169 755.3443459809587 973.3755654096889 704.3701943091187 895.6462673886955 861.1085986417055 827.9400007250659 786.611181921718 979.7492723260686 1105.5454215384036 0.821337931723707 0.6633657035414182 0.6832323044039852 0.8804482805014054 0.6371246088912058 0.8101397282640578 0.7788993395164568 0.7488973176452213 0.7115141237952233 0.8862134953828623 1.0 10.110542584426847 -10.773034618722992 0.8029225458478737 1.016956236813244 0.7445887211628105 0.46766555313582403 0.07660903445201171 0.34873096308754087 0.3579756487483372 0.06154053660229542 0.012222857458253397 1.6864185912952152e-11 10.773034618722992 -0.2723675156504336 ANRDQDS(ph)SDDERALEDWVSSETSALPRPR ddPTM_A549_PD325901_60min_R1 1 ANRDQDSSDDERALEDWVSSETSALPRPR 29 3 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 ANRDQDS(0.5)S(0.5)DDERALEDWVSSETSALPRPR 42.023999999999994 0.019206 2294900.0 1398.0 1295.2 1669.7 1412.7 1628.8 1619.2 1243.0 1477.4 1868.1 1794.8 1587.1 True False 1539.9239308467938 1404.3510495047951 1783.015882721755 1499.9592705255166 1514.3987070549542 1606.01377204405 1290.3030451956984 1447.9320980021214 1789.5902534927436 1681.4760216975167 1391.896761455825 1.1063492447788605 1.0089477096246304 1.2809972205530868 1.0776368708241448 1.0880107986392618 1.1538311004935982 0.9270105951292918 1.0402582562859672 1.285720538368779 1.208046507658235 1.0 10.442836493507377 ANS(ph)DTDLVTSESR ddPTM_A549_MK2206_60min_R1 2 ANSDTDLVTSESR 13 0 A0A2R8Y6F3;Q9P2P5;C9JHL2 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 ANS(0.982)DT(0.018)DLVTSESR;ANS(0.838)DT(0.162)DLVTSESR 228.73 2.6382e-46 45297000.0 1550.55 2518.4 1766.38 2229.6 2676.52 2041.6999999999998 1909.44 2272.5299999999997 2586.8 2736.7 2740.0 True False 1812.2449326921296 2646.5758030438847 2016.8792448570011 2775.8521000905457 2282.8074535646047 2257.751338829225 2256.360531808301 2594.668086831242 2000.8939302707654 2118.4775692793037 2059.582379847058 0.8799089322305742 1.2850060424581882 0.9792661194774701 1.3477742513492843 1.1083836586978975 1.0962180298886044 1.095542743949798 1.259803012600991 0.9715046845658825 1.028595694937252 1.0 11.008136117408634 -8.793976533069872 24.930059558744155 0.9865438314475766 1.1355966779053854 0.17165133662342336 0.12744208954747702 180.71828622557192 138466.06012762405 0.019533051047492256 0.02079525573868534 1.607028085792285e-09 8.793976533069872 0.1490528464578088 ANS(ph)DTDLVTSESR ddPTM_A549_PD325901_60min_R1 2 ANSDTDLVTSESR 13 0 A0A2R8Y6F3;Q9P2P5;C9JHL2 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 ANS(0.836)DT(0.164)DLVTSESR;ANS(0.889)DT(0.111)DLVTSESR 222.88 5.2445e-46 53789000.0 3333.8 3280.7 2852.2 3395.4 3607.2 3722.1000000000004 3630.8 2942.0 3568.1000000000004 3951.3 3867.9 True False 3672.244921786155 3557.1761026176496 3045.76744367191 3605.126146487108 3353.842716164433 3691.7884516583244 3768.9720808499933 2883.3195020456465 3418.145165401989 3701.814243666922 3392.172820638264 1.08256421944186 1.0486423571863708 0.897880976211237 1.0627778527536151 0.98870042698278 1.0883255797573679 1.1110790281436285 0.8499919239088554 1.0076565511655853 1.0912811461564615 1.0 11.72799395725378 ANS(ph)FESR ddPTM_A549_MK2206_60min_R1 2 ANSFESR 7 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ANS(0.996)FES(0.004)R;ANS(0.8)FES(0.2)R 104.05 0.010205 57186000.0 1607.23 1976.82 1545.1599999999999 1625.01 2834.59 2495.1 2164.8 2488.23 3461.3 3684.7 3214.5 True False 1878.491130999176 2077.431694319097 1764.28692239679 2023.1375229494713 2417.6255659586664 2759.1298258866636 2558.116138374922 2840.9442223847864 2677.321076560306 2852.323710864708 2416.250934313274 0.7774404157791106 0.8597748126311752 0.7301753710022757 0.837304393438122 1.0005689109627942 1.141905332225289 1.0587129432820965 1.1757653901092915 1.1080476115040723 1.1804749541360742 1.0 11.23855457495845 -6.7979108473308525 3.126456199241861 1.0690118685765142 0.7945663513192815 0.8309655650355631 0.06389343671080445 0.08089613949638896 1.6228782344222623 0.009300004961039431 0.019352556495687148 1.5925356117678684e-07 6.7979108473308525 -0.27444551725723265 ANS(ph)FESR ddPTM_A549_PD325901_60min_R1 2 ANSFESR 7 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ANS(0.999)FES(0.001)R;ANS(0.983)FES(0.017)R 85.355 0.013642 87980000.0 1938.29 1891.79 1983.81 1794.21 2559.08 1725.27 1971.94 2331.8 2148.3500000000004 2504.8 2435.8999999999996 True False 2135.063773906319 2051.217782537582 2118.443276218628 1905.0342767534412 2379.339049146729 1711.2199731314445 2046.9832557869713 2285.290419738287 2058.06232058837 2346.6465005281566 2136.299742442346 0.9994214442330017 0.9601732106153357 0.991641404120892 0.8917448422174558 1.1137664822383613 0.8010205399243624 0.9581910324282197 1.069742402873487 0.9633771327592211 1.0984631294507996 1.0 11.060898369232621 -11.898062821447912 0.3481537925733815 1.0290855870176776 0.9677859202409942 0.06068600967018567 0.08339593461588586 26.643986937789176 2.178773028475979 0.6920355298593686 0.02439405834703431 1.2645534144022622e-12 11.898062821447912 -0.061299666776683415 ANS(ph)FVGTAQYVSPELLTEK ddPTM_A549_PD325901_60min_R1 2 ANSFVGTAQYVSPELLTEK 19 0 E9PER6;Q6A1A2;O15530-4;O15530-5;O15530-2;O15530 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 ANS(0.993)FVGT(0.007)AQYVSPELLTEK;ANS(0.997)FVGT(0.003)AQYVSPELLTEK 266.14 7.744399999999998e-111 79712300.0 5082.0 5586.1 5277.2 5509.799999999999 5887.3 5513.9 5583.4 6018.9 6205.7 5732.0 6307.700000000001 True False 5597.920898829333 6056.860251419656 5635.342526381531 5850.127832336294 5473.79635808241 5468.996626527719 5795.879342353714 5898.848317764293 5944.896009903063 5370.080541770763 5531.892887804749 1.0119358802427547 1.0948983240026604 1.0187005859793201 1.0575273149690054 0.9894978932346259 0.9886302460021077 1.047720818154475 1.0663345146773375 1.07465855367677 0.9707491903195186 1.0 12.433557506998477 ANS(ph)GGVDLDSSGEFASIEK ddPTM_A549_MK2206_60min_R1 2 ANSGGVDLDSSGEFASIEK 19 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 ANS(0.996)GGVDLDS(0.003)S(0.001)GEFASIEK;ANS(1)GGVDLDSSGEFASIEK 183.05 2.3105e-43 15595400.0 6884.8 9041.2 6769.2 6727.3 11865.5 8607.8 9611.9 10056.5 14467.3 13775.2 14055.5 True False 8046.785922800804 9501.358461912474 7729.174347697557 8375.488801999976 10120.100668132802 9518.671682604798 11358.25781155115 11482.03967173959 11190.47964953079 10663.372752708097 10565.131437934418 0.7616361396043384 0.8993128497954662 0.7315738940971172 0.7927481878670751 0.9578774033796001 0.900951563028144 1.0750701851913538 1.0867862590438757 1.0591898184390816 1.0092986363066851 1.0 13.36702309511162 -7.145996417326408 1.402775857381624 1.035390717163185 0.7987473730934992 0.7710994476309733 0.058140883063908216 0.14424187496432703 0.5568471396333834 0.00916162313564223 0.01937865607324136 7.145022202735377e-08 7.145996417326408 -0.2366433440696859 ANS(ph)GGVDLDSSGEFASIEK ddPTM_A549_PD325901_60min_R1 2 ANSGGVDLDSSGEFASIEK 19 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 ANS(0.994)GGVDLDS(0.004)S(0.002)GEFASIEK;ANS(0.977)GGVDLDS(0.016)S(0.007)GEFASIEK 192.27 4.2278e-44 23839000.0 6866.0 7212.6 7297.099999999999 7467.5 7913.0 8146.6 8835.7 8526.1 8456.2 8423.0 9493.9 True False 7563.031265517943 7820.431114621897 7792.325087026961 7928.750515077009 7357.218178368027 8080.256790596621 9171.947398580556 8356.04024690394 8100.815321227629 7891.170342521827 8326.210486790662 0.9083401479600492 0.9392545536806723 0.9358789450962479 0.9522640014512949 0.8836214494024721 0.9704603076532546 1.1015752500049856 1.0035826334393783 0.9729294418006107 0.9477505228868504 1.0 13.023444314964703 -7.514885956629657 24.996450363779758 0.9979091673000856 0.9269778225010374 0.4883254677167025 0.03933489054560613 270.7801277521928 846831.2567343025 0.005770678057196218 0.008782121617414896 3.0557234242314866e-08 7.514885956629657 -0.07093134479904817 ANS(ph)GQAHKDEALK ddPTM_A549_MK2206_60min_R1 2 ANSGQAHKDEALK 13 1 Q8IY63-2;Q8IY63 Q8IY63-2 AMOTL1 Angiomotin-like protein 1 1 ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK 116.29 7.1969000000000005e-06 36551000.0 5495.2 5834.0 6321.2 5227.5 7351.1 5703.2 5908.0 5285.200000000001 8146.900000000001 8225.8 8655.0 True False 6422.655415258967 6130.925680971261 7217.641211172043 6508.2377346713965 6269.762927943288 6306.708838522234 6981.407125609314 6034.393285246168 6301.640157925972 6367.586066933791 6505.724634151932 0.9872313656718743 0.9423893610231892 1.1094292514753683 1.0003862906379823 0.9637301423779976 0.9694091270655754 1.0731175262107278 0.9275512912994348 0.9686300162237709 0.9787666132542745 1.0 12.667494043814747 -6.525260896377624 24.931323440239392 0.9846473862534089 1.0141128975545999 0.0661747865796205 0.049759053551616236 158.43365005849586 1658166.7097355074 0.0067887888153947175 0.014203728485590926 2.9835897303571775e-07 6.525260896377624 0.029465511301191016 ANS(ph)GQAHKDEALK ddPTM_A549_PD325901_60min_R1 2 ANSGQAHKDEALK 13 1 Q8IY63-2;Q8IY63 Q8IY63-2 AMOTL1 Angiomotin-like protein 1 1 ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK 131.25 1.6617e-08 37200000.0 10065.3 9884.5 10039.1 10379.2 12869.5 11163.8 11170.0 11327.2 12229.2 11517.5 11934.8 True False 11087.121846317763 10717.501504655773 10720.413696012434 11020.299611126526 11965.590717364768 11072.885714146094 11595.08046245854 11101.270109983507 11715.249252188558 10790.283084411154 10466.895260930627 1.0592560229108465 1.023942748778673 1.0242209775450897 1.0528718723556516 1.143184336813636 1.0578959125995484 1.1077860409799882 1.060607738325307 1.1192668847960687 1.030896251029436 1.0 13.353545946372872 -6.520368993783681 24.98870915607278 1.0681031812708188 1.0352745639365315 0.14800070419872313 0.03912463182292472 204.9595616904872 2040692.3844598348 0.007128256588318217 0.015039971125780382 3.0173869395973685e-07 6.520368993783681 -0.032828617334287324 ANS(ph)LDNER ddPTM_A549_MK2206_60min_R1 4 ANSLDNER 8 0 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 ANS(1)LDNER;ANS(1)LDNER;ANS(1)LDNER;ANS(1)LDNER 134.3 0.00108 57954400.0 9117.98 9796.529999999999 8879.6 7772.099999999999 9737.89 7844.429999999999 5931.23 6598.85 10560.900000000001 13240.3 13805.79 True False 10656.872110791785 10295.131532637197 10138.860801544526 9676.264848902825 8305.459280704885 8674.522375888795 7008.857715915323 7534.2571956305665 8168.8730122918405 10249.307034212292 10377.431322579825 1.0269277415119034 0.992069348629313 0.977010638411434 0.9324335231059192 0.8003386408959776 0.8359026531945588 0.6753942761023182 0.7260233251784656 0.7871767837689783 0.9876535643181031 1.0 13.341161763825216 -6.444297725193176 2.834684422143984 0.8562376029847991 0.999544438460952 0.3662400007135602 0.09432867186431618 0.3250368052605656 5.072826340479349 0.01688674436485998 0.04267863087669368 3.595027979778408e-07 6.444297725193176 0.14330683547615286 ANS(ph)LDNER ddPTM_A549_PD325901_60min_R1 3 ANSLDNER 8 0 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 ANS(1)LDNER;ANS(1)LDNER;ANS(1)LDNER 136.67 0.0010859 91673000.0 12311.1 12590.5 11239.0 11555.8 13805.9 13193.7 13160.0 12933.7 13810.3 13234.4 13303.400000000001 True False 13560.913809047184 13651.54562136359 12001.746125597301 12269.575520874047 12836.221211769396 13086.25488155729 13660.81100142831 12675.72720720864 13229.901117611911 12398.77772540316 11667.166137200831 1.1623142800553878 1.170082388544683 1.0286770570044135 1.0516328795346823 1.100200430920498 1.1216309708517551 1.170876529980209 1.0864443908784331 1.133942978272015 1.0627068801111508 1.0 13.510166563877762 -10.785685023640456 0.9134361580285327 0.9963792360713378 1.11317209461666 0.28038582699980275 0.04745732579052807 0.463249950008856 0.6509666894429769 0.03735275902105201 0.008300340939338888 1.6380040693539422e-11 10.785685023640456 0.11679285854532206 ANS(ph)LDNERCPDAR ddPTM_A549_MK2206_60min_R1 2 ANSLDNERCPDAR 13 1 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 ANS(1)LDNERCPDAR;ANS(1)LDNERCPDAR 66.387 0.001377 5407500.0 1360.21 1909.38 1126.48 1293.9699999999998 1598.0900000000001 802.03 910.56 853.32 1611.55 1928.85 2233.29 True False 1589.7801940583417 2006.5592863786285 1286.2318027528127 1610.9927080885213 1363.0130779770218 886.9002822555736 1075.9969655204495 974.2807231829001 1246.5364981165349 1493.1214453554965 1678.7024573316182 0.9470291695321499 1.1953037166384775 0.7662059450352761 0.9596654255509193 0.811944411008726 0.5283248847239708 0.6409694349472751 0.5803772544251637 0.7425595242756523 0.8894497287678294 1.0 10.713130826210167 -5.772241440282858 24.971692713698367 0.8124969046788132 1.071166456366235 0.3334846296754972 0.15510913203686666 200.56585568177368 463662.72404517146 0.02538944732602433 0.08008314476609063 1.6895014145079031e-06 5.772241440282858 0.2586695516874219 ANS(ph)LDNERCPDAR ddPTM_A549_PD325901_60min_R1 2 ANSLDNERCPDAR 13 1 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 ANS(1)LDNERCPDAR;ANS(1)LDNERCPDAR 51.147 0.007468300000000001 10318800.0 1388.82 1443.48 1411.0700000000002 1400.03 1567.67 1987.0500000000002 1651.32 1788.33 1870.6 1574.8899999999999 1914.75 True False 1529.8119840047523 1565.1271254934998 1506.8336956532241 1486.5066734011732 1457.5622673679027 1970.868123604327 1714.1618862369755 1752.6603552322545 1791.9851871867268 1475.4511766275905 1679.2478886003043 0.9110102173657573 0.9320405498905066 0.8973265387930356 0.885221701627515 0.8679851719705408 1.1736612188014095 1.0207914494778807 1.043717468475212 1.0671355904936655 0.8786381014046809 1.0 10.71359949960455 -7.230650596767242 24.995381053997114 1.041405427435435 0.8997411712375117 0.48745318500917123 0.06686953145975928 304.7233537147965 247384.855791363 0.0069683269916800085 0.01206886264328023 5.8796219591823687e-08 7.230650596767242 -0.14166425619792322 ANS(ph)MEGLMPR ddPTM_A549_MK2206_60min_R1 1 ANSMEGLMPR 10 0 O43306-2;O43306 O43306-2 ADCY6 Adenylate cyclase type 6 1 ANS(1)MEGLMPR 67.997 0.0043097000000000005 2424600.0 1032.3 1046.2 816.49 979.32 1920.4 900.76 1005.8 1267.7 1834.1 1771.2 1770.8 True False 1206.5270026881337 1099.4471113185014 932.2805594681164 1219.2534439633448 1637.9117039384978 996.0778253239034 1188.5408407139216 1447.4003571684273 1418.6792784558572 1371.0846898481761 1331.0614884062663 0.9064397198755688 0.8259927290323107 0.7004038262607789 0.9160008418718554 1.2305304587390893 0.7483334421436441 0.8929270744186353 1.087403076248159 1.0658255015359954 1.030068634537561 1.0 10.378361502771249 -6.69840974838777 0.6367001108400977 1.0279888182045478 0.8006991213042057 0.2223823784687623 0.13143399758036198 1.0792025695981657 0.7057435202498632 0.025103448375942694 0.12791841339737267 2.0025817389007e-07 6.69840974838777 -0.22728969690034206 ANS(ph)PEKPPEAGAAHKPR ddPTM_A549_MK2206_60min_R1 3 ANSPEKPPEAGAAHKPR 17 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 ANS(1)PEKPPEAGAAHKPR;ANS(1)PEKPPEAGAAHKPR;ANS(1)PEKPPEAGAAHKPR 179.24 2.6894e-31 1090380000.0 18498.2 20393.0 19494.1 17216.6 24949.7 17902.1 16669.3 17074.5 24703.6 27317.2 27879.2 True False 21620.24392243113 21430.916594454397 22258.65651058484 21434.667772882553 21279.63218066775 19796.488339547777 19697.89603908586 19494.86266346321 19108.274043542955 21146.22554738064 20956.025213223395 1.0316958346083975 1.0226613289685937 1.0621602276246296 1.022840331350486 1.015442192121441 0.9446680913065546 0.9399633679890952 0.930274823832614 0.9118272119411989 1.0090761645981046 1.0 14.35507748244738 -7.13346726229809 3.228868420952115 0.9526125552289417 1.0349649374654812 0.6339132565254134 0.02851907983381558 0.14866752545131734 2.923403480724464 0.00515818361003013 0.00936706806214926 7.354154299898123e-08 7.13346726229809 0.08235238223653951 ANS(ph)PSLFGTEGKPK ddPTM_A549_MK2206_60min_R1 4 ANSPSLFGTEGKPK 14 1 Q5JPT2;Q96B97-2;Q96B97;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 ANS(0.992)PS(0.008)LFGTEGKPK;ANS(0.877)PS(0.118)LFGT(0.005)EGKPK;ANS(0.995)PS(0.005)LFGTEGKPK;ANS(0.861)PS(0.139)LFGTEGKPK 149.53 6.3537e-14 263084900.0 24052.699999999997 23408.6 26290.0 22543.1 32266.3 24056.899999999998 25412.0 24434.000000000004 38425.1 37997.7 43236.5 True False 28112.207727944286 24599.997753785374 30018.31731976727 28066.160511998223 27519.970012909143 26602.585190322203 30029.031461744067 27897.594325986694 29721.876202275853 29413.993179451238 32499.68378330559 0.8649994232370021 0.756930372547867 0.9236495197896988 0.863582572037677 0.8467765470089151 0.8185490470521869 0.9239791889042734 0.858395869695111 0.9145281658876743 0.9050547499345392 1.0 14.988138060568195 -9.68367500460738 0.3189953565256327 1.0278157014518186 0.8326746624997089 0.30535060588467944 0.05091200305633649 0.8159820010360421 0.18459157846867305 0.059439471082205694 0.023591094169625508 2.0716910765086378e-10 9.68367500460738 -0.19514103895210966 ANS(ph)PSLFGTEGKPK ddPTM_A549_PD325901_60min_R1 4 ANSPSLFGTEGKPK 14 1 Q5JPT2;Q96B97-2;Q96B97;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 ANS(0.97)PS(0.03)LFGTEGKPK;ANS(0.997)PS(0.003)LFGTEGKPK;ANS(0.958)PS(0.04)LFGT(0.001)EGKPK;ANS(0.865)PS(0.133)LFGT(0.001)EGKPK 174.04 2.7877e-23 652932700.0 38488.899999999994 37268.7 40751.200000000004 39848.6 45820.5 46759.6 43541.0 44198.7 41766.399999999994 40825.2 40880.299999999996 True False 42396.264793969385 40409.464143514015 43516.821488872716 42309.95751926317 42602.22615214359 46378.80532069595 45197.9765815494 43317.122255290604 40011.103454568416 38247.48990472777 35852.28226157305 1.1825262471340705 1.1271099521278012 1.2137810689813358 1.180118945024918 1.1882709681164487 1.2936081720634385 1.2606722286684995 1.208211012600402 1.1159987853117193 1.066807675608477 1.0 15.129777339554785 -9.399835577570187 0.9822099697489162 1.0241898820012458 1.206959848037896 0.6633019566359091 0.046839477052744084 0.18450436121335606 0.3753539222924706 0.014162758966668612 0.010726160125771824 3.982579211240021e-10 9.399835577570187 0.1827699660366502 ANS(ph)RDGEAGR ddPTM_A549_MK2206_60min_R1 2 ANSRDGEAGR 10 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;Q5VY93;V9GYF0 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ANS(1)RDGEAGR;ANS(1)RDGEAGR 55.31399999999999 0.0048611999999999995 36244000.0 2254.8 2181.1 949.24 934.6500000000001 257.374 0.0 0.0 0.0 0.0 2420.7 2188.4 True False 2635.355115432727 2292.1086737686696 1083.8565056149057 1163.6392919580326 219.5146255412761 0.0 0.0 0.0 0.0 1873.8621887508345 1644.9598832325926 1.6020786538902452 1.393413114284789 0.6588954032635528 0.7073967601394066 0.13344679574184934 0.0 0.0 0.0 0.0 1.1391537312559956 1.0 10.683836685055963 -5.778520998685017 1.5544610370340417 0.3811559532682957 1.6905332381023186 0.5496608468815687 0.3921836444647425 0.33566458904555874 1.3411407934181938 0.06582291340994555 0.49720725457350484 1.6652483089860061e-06 5.778520998685017 1.3093772848340228 ANS(ph)RDGEAGR ddPTM_A549_PD325901_60min_R1 4 ANSRDGEAGR 10 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;Q5VY93;V9GYF0 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ANS(1)RDGEAGR;ANS(1)RDGEAGR;ANS(1)RDGEAGR;ANS(1)RDGEAGR 87.831 0.00019979 114294000.0 3861.8999999999996 4126.639999999999 2759.67 2730.1 3599.79 2914.87 2067.7200000000003 1701.29 2881.9700000000003 3618.6400000000003 4103.36 True False 4253.957245019482 4474.40643524434 2946.9578014438175 2898.7320764930337 3346.9531690013196 2891.1322651420674 2146.408216099799 1667.3564363138137 2760.8508232206405 3390.1584528390345 3598.67273334218 1.1820906095755817 1.243349080839825 0.8189013060676129 0.8055003306179794 0.9300521100436154 0.8033884933062525 0.5964444046864952 0.46332538684763835 0.7671858565078706 0.9420580041715844 1.0 11.813249192856283 -5.763427600127339 24.814969333653828 0.8276815203332919 1.2127199479690354 0.5306058624019858 0.14959845654672474 31.45859950622234 392664.6737338949 0.024381418030847042 0.08177503920777465 1.7241394929644034e-06 5.763427600127339 0.3850384276357435 ANS(ph)TES(ph)VR ddPTM_A549_MK2206_60min_R1 2 ANSTESVR 8 0 Q59FP8;Q92859-4;Q92859 Q59FP8 NEO1 Neogenin 2 ANS(0.965)T(0.116)ES(0.919)VR;ANS(0.941)T(0.101)ES(0.959)VR 46.592 0.045286 6565600.0 1955.1 2136.8 2104.67 1610.5900000000001 1568.17 927.2 1127.3 920.86 1642.4099999999999 3426.0 2831.5 True False 2285.0730823942354 2245.5539929892684 2403.1438536856062 2005.1846223021332 1337.4942703422375 1025.3156885744527 1332.1158179924475 1051.3947250154747 1270.4067573898294 2652.064220539664 2128.3604045755264 1.0736307053456782 1.05506284939421 1.129105694937452 0.9421264453103942 0.6284153132462466 0.4817396933199095 0.6258882730240044 0.4939928043930894 0.596894564782695 1.2460597438470875 1.0 11.055526754048326 -6.561553429416408 4.582808202313176 0.7319084970168716 1.0779717200047985 0.36200113315115945 0.21310771249446428 0.16705627157516847 8.013356726957898 0.029688566802855924 0.06477701595263546 2.744394691417646e-07 6.561553429416408 0.3460632229879269 ANS(ph)TES(ph)VR ddPTM_A549_PD325901_60min_R1 1 ANSTESVR 8 0 Q59FP8;Q92859-4;Q92859 Q59FP8 NEO1 Neogenin 2 ANS(0.548)T(0.482)ES(0.969)VR 52.788000000000004 0.0304 12242000.0 3920.6 3564.7 4366.8 3549.8 4132.3 3859.9 4001.5 3711.3 4023.5 4587.3 4628.2 True False 4318.616425806823 3865.1097793157396 4663.157307701597 3769.0630838192665 3842.0615036610907 3828.466254145768 4153.779272204816 3637.2752100414746 3854.406287098147 4297.657095126483 4058.9607405770594 1.0639709772587869 0.952241232756107 1.1488549916446444 0.9285783540945068 0.946562864048512 0.9432134230501272 1.0233602977924532 0.8961099755609772 0.9496042296162167 1.0588072587554735 1.0 11.986894670608336 -6.304608539675691 24.999995241349193 0.966349954290239 1.0447445939303215 0.28526295640054067 0.060500920608053295 396.9867715723791 229901.25466370553 0.007165108682446337 0.016650395318526474 4.95896976423169e-07 6.304608539675691 0.07839463964008253 ANS(ph)TESVR ddPTM_A549_MK2206_60min_R1 2 ANSTESVR 8 0 Q59FP8;Q92859-4;Q92859 Q59FP8 NEO1 Neogenin 1 ANS(0.888)T(0.073)ES(0.039)VR;ANS(0.738)T(0.14)ES(0.122)VR 62.633 0.010270999999999999 59949000.0 2433.7 2324.0 2319.4 1748.72 1945.48 1451.69 1176.26 1277.99 1745.3 3197.5 3544.7 True False 2844.4490617476613 2442.281673393421 2648.325796556419 2177.156478503023 1659.3024691617725 1605.3068722461667 1389.9712162439428 1459.1489961802295 1349.9923366713967 2475.1825292398044 2664.4531612568853 1.067554537309212 0.9166164783476018 0.9939472140343955 0.8171119350718882 0.6227553530642814 0.6024901828219437 0.5216722277032863 0.5476354463262227 0.5066676931316644 0.9289645489854295 1.0 11.379623756673018 -6.429187362760727 3.3525505852571014 0.7053800736609462 0.9852901488734419 0.43653514655904835 0.15524385403916355 0.27086845553083877 5.737931270727653 0.029876009386969247 0.07357112812725788 3.72231084159007e-07 6.429187362760727 0.27991007521249567 ANS(ph)TESVR ddPTM_A549_PD325901_60min_R1 2 ANSTESVR 8 0 Q59FP8;Q92859-4;Q92859 Q59FP8 NEO1 Neogenin 1 ANS(0.826)T(0.144)ES(0.031)VR;ANS(0.433)T(0.433)ES(0.134)VR 75.47399999999999 0.0048324 127729000.0 4237.9 3801.0 3243.5 3355.3 4444.799999999999 3763.7 3521.8 3293.0 3578.2 3858.8 4420.1 True False 4668.128488222913 4121.323609610659 3463.6234147499626 3562.549260560817 4132.612581727564 3733.0496750507596 3655.824026202908 3227.3185316914755 3427.820697525686 3615.154709453074 3876.4557213224707 1.2042259279645169 1.0631679827893534 0.893502638427747 0.9190223019870938 1.0660801718941613 0.9630058856385473 0.9430841699271898 0.8325436335928174 0.8842666971973742 0.9325928036706033 1.0 11.920522470545137 -7.48679480218332 4.829936027069157 0.9340911594480418 1.0176503504063241 0.26083608309442563 0.08615071015797968 0.31221599525495236 17.643953941264616 0.014347987222294169 0.022689685104995753 3.259906904730564e-08 7.48679480218332 0.08355919095828235 ANS(ph)TSDSVFTETPSPVLK ddPTM_A549_MK2206_60min_R1 1 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANS(0.846)T(0.132)S(0.021)DSVFTETPSPVLK 135.27 8.5691e-13 2974800.0 1197.4 1749.3 1122.6 1133.3 1836.5 1157.3 1174.5 1230.6 1284.7 1693.2 2347.8 True False 1399.4918463806762 1838.3318981355885 1281.8015604096902 1410.9585508757696 1566.3532827968393 1279.7647178464333 1387.8914470257514 1405.0413185544426 993.7175012443385 1310.7049440215294 1764.776464016396 0.793013662022452 1.0416797456329343 0.7263251672636662 0.7995112013589619 0.8875646943024319 0.7251710026401075 0.7864403652953845 0.7961582371496251 0.5630840627728964 0.7427030962542076 1.0 10.785269740295334 -5.779845195084383 24.894016390139832 0.7882311790978872 0.9173468405671775 0.1701714719062859 0.1153638164870262 375.50660541976094 507877.421889682 0.021850532291760517 0.06812034863281509 1.6601785751093436e-06 5.779845195084383 0.12911566146929032 ANS(ph)TSDSVFTETPSPVLK ddPTM_A549_PD325901_60min_R1 1 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANS(0.856)T(0.142)S(0.002)DSVFTETPSPVLK 259.56 3.5879999999999993e-87 8725800.0 2554.9 3420.8 3681.2 3475.2 3839.1 3538.1 3523.4 2955.1 3072.2 3449.6 4207.1 True False 2814.2715671820283 3709.0828212986435 3931.02836885388 3689.8552112481602 3569.4548601760002 3509.286886653316 3657.48491507846 2896.158212268896 2943.086117863286 3231.7916672875826 3689.6533710042254 0.7627468719144364 1.0052659283517276 1.0654194238804493 1.000054704391887 0.9674228176086064 0.9511156018697174 0.9912814422681093 0.7849404594558537 0.7976592438173281 0.87590658046232 1.0 11.849269571564884 ANSALT(ph)PPKPESGLTLQESNTPGLR ddPTM_A549_MK2206_60min_R1 4 ANSALTPPKPESGLTLQESNTPGLR 25 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 ANS(0.007)ALT(0.993)PPKPESGLTLQESNTPGLR;ANS(0.006)ALT(0.993)PPKPES(0.001)GLTLQESNTPGLR;ANS(0.034)ALT(0.884)PPKPES(0.031)GLT(0.031)LQES(0.009)NT(0.009)PGLR;ANS(0.011)ALT(0.984)PPKPES(0.004)GLT(0.001)LQESNTPGLR 159.42 7.960899999999998e-41 80310000.0 10805.5 12525.3 12767.4 11145.1 17020.6 13511.3 12552.599999999999 13278.2 21280.7 19217.899999999998 20241.2 True False 12629.204230888925 13162.784270118167 14578.009301954988 13875.650000322545 14516.892287052486 14941.056797924928 14833.244936513782 15160.425512782056 16460.655428294845 14876.563042588794 15214.75141129937 0.8300631334344204 0.8651330484665499 0.9581496869629101 0.911986638836417 0.9541327291270356 0.9820112333106421 0.9749252245749964 0.9964293929589301 1.0818878983504254 0.9777723368875144 1.0 13.893183141885991 -6.16944681981621 0.4556460124195431 1.037215510731685 0.7905027210144271 0.7106999774903412 0.03514494931430493 0.9015927967154844 0.20608590300214694 0.009272967682769131 0.10339739097515407 6.769446810060669e-07 6.16944681981621 -0.24671278971725785 ANSALT(ph)PPKPESGLTLQESNTPGLR ddPTM_A549_PD325901_60min_R1 2 ANSALTPPKPESGLTLQESNTPGLR 25 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 ANS(0.024)ALT(0.975)PPKPES(0.001)GLTLQESNTPGLR;ANS(0.005)ALT(0.995)PPKPESGLTLQESNTPGLR 168.88 4.2839999999999996e-48 125933000.0 13144.7 14135.7 14610.0 13749.2 14532.400000000001 15311.4 14796.8 14499.6 15661.7 16677.2 16833.5 True False 14479.140267383309 15326.965048243464 15601.522457067047 14598.456857301217 13511.694358058328 15186.709034878484 15359.900321119645 14210.39410328384 15003.49321402885 15624.198745851252 14763.086216348469 0.9807664911791465 1.0381951865369832 1.056792748374666 0.9888485810734517 0.9152350775473787 1.0286947330877807 1.0404261071177834 0.9625625628025809 1.0162843320263317 1.0583287611332377 1.0 13.849706727207604 -6.292428526988261 24.869575258713603 1.0008453153277166 1.0265458741726725 0.0648031272461358 0.04041893130247928 1149.4292515504403 922444.5428261118 0.005087901919411964 0.0118252007277789 5.100015229920122e-07 6.292428526988261 0.025700558844955923 ANSFESRLT(ph)PSR ddPTM_A549_MK2206_60min_R1 2 ANSFESRLTPSR 12 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ANS(0.003)FES(0.201)RLT(0.702)PS(0.094)R;ANS(0.001)FES(0.006)RLT(0.815)PS(0.179)R 58.83 0.00447 9583400.0 2615.1 2465.9 2299.1000000000004 2208.8 2695.6000000000004 2453.4 2386.2 2125.42 3103.6000000000004 3922.6000000000004 3684.7 True False 3056.464946943466 2591.403777289517 2625.1469513076054 2749.9560991567996 2299.080810839728 2713.017159564883 2819.7416525269027 2426.704793825762 2400.639555430783 3036.481935635986 2769.687297453449 1.1035415260609711 0.9356304517380528 0.9478134783378834 0.9928760195005439 0.8300867801768043 0.9795391566619558 1.0180722044396404 0.8761656220386187 0.866754726296365 1.0963266280738038 1.0 11.435507387333967 -5.261074144820151 23.77502489967512 0.9372920200377015 1.103541629819619 0.22149828171668917 0.07443270851351623 12.649226654486224 822714.8235652759 0.008693029288068777 0.07039819653693179 5.481833684587624e-06 5.261074144820151 0.1662496097819175 ANSFESRLT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 ANSFESRLTPSR 12 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ANSFES(0.008)RLT(0.986)PS(0.005)R;ANSFES(0.005)RLT(0.99)PS(0.005)R 76.34100000000001 0.00046132 20997400.0 5024.799999999999 4216.200000000001 4139.9 4409.4 4924.9 4700.4 4588.1 4449.5 4568.3 4663.8 5479.2 True False 5534.913996937751 4571.513970755187 4420.858509241056 4681.758623526022 4578.992013982652 4662.121500812651 4762.702656204658 4360.751231934778 4376.31023769118 4369.326872070912 4805.293135510531 1.1518369100181236 0.9513496558560092 0.9199976743502805 0.9742919924964403 0.952905865439188 0.9702054316645411 0.9911367572997504 0.9074891185533214 0.9107270075473192 0.9092737422785133 1.0 12.23040872653477 -5.2608152612869405 24.827013176530745 0.9548631616854664 1.1518369768187793 0.7639877087461495 0.032289100642965404 19.412088202857166 772002.4995810636 0.0050254470572995815 0.04150444360347598 5.485102387268652e-06 5.2608152612869405 0.1969738151333129 ANSFVGT(ph)AQYVSPELLTEK ddPTM_A549_PD325901_60min_R1 1 ANSFVGTAQYVSPELLTEK 19 0 E9PER6;Q6A1A2;O15530-4;O15530-5;O15530-2;O15530 E9PER6 PDPK1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 ANS(0.309)FVGT(0.691)AQYVSPELLTEK 247.36 4.128999999999999e-86 74119000.0 8829.8 8934.4 9900.6 10205.0 11263.0 10306.0 11617.0 11000.0 11084.0 11112.0 11526.0 True False 9726.19479584479 9687.333243279523 10572.514253144287 10835.33967276343 10471.925735240628 10222.071352943414 12059.091292066323 10780.59637066693 10618.17802564828 10410.38642361421 10108.375069333908 0.9621917201461441 0.9583472295827534 1.0459163001597014 1.0719170587204403 1.035965292484015 1.011247730998272 1.192980198038987 1.0665014205272576 1.0504337198429623 1.0298773395534684 1.0 13.303263480862958 -5.760879366841836 24.976658709682695 1.0426667134170886 0.9602694467646682 0.3308136918595703 0.04964617977268388 14.201513929853657 633221.4596645111 0.007391477602904497 0.025569927349820568 1.734285660108792e-06 5.760879366841836 -0.08239726665242042 ANSISRLS(ph)DSK ddPTM_A549_PD325901_60min_R1 2 ANSISRLSDSK 11 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 ANS(0.001)IS(0.024)RLS(0.815)DS(0.16)K;ANS(0.001)IS(0.005)RLS(0.853)DS(0.142)K 55.885 0.004515399999999999 11931800.0 4693.1 4993.4 4654.0 4864.0 6039.5 5278.9 4567.4 5049.200000000001 5273.2 5240.1 5963.1 True False 5169.540057122385 5414.2113423388255 4969.848426775498 5164.438233054511 5615.306355143902 5235.910388613715 4741.214906377182 4948.489744979229 5051.585742046966 4909.239191718938 5229.676503205363 0.9885009242835349 1.0352860906444898 0.9503166063387265 0.98752537176805 1.0737387583538254 1.0011920212281835 0.906598123893745 0.9462324757461021 0.9659461228530595 0.938727125609008 1.0 12.352505991811965 -7.5477728383307445 24.983724093527393 0.9739031464716502 1.0077081431602317 0.2553032210041234 0.03869223537650409 341.80326626404366 343032.3409483077 0.006097883670833542 0.009044871327676984 2.83287336846186e-08 7.5477728383307445 0.0338049966885815 ANSKS(ph)PLQR ddPTM_A549_PD325901_60min_R1 1 ANSKSPLQR 9 1 E5RGP4;E5RFH7;A0A087WTS3;A1XBS5-2;A1XBS5-3;A1XBS5 E5RGP4 FAM92A1 Protein FAM92A1 1 ANS(0.202)KS(0.798)PLQR 50.675 0.0077069999999999994 24320000.0 4004.0 4388.2 4562.9 4609.5 4816.8 4088.2 4082.6 5152.7 5310.8 4391.8 4862.8 True False 4410.483132410988 4758.009014389239 4872.565832946695 4894.218346065946 4478.484585057897 4054.90705463839 4237.965577084441 5049.925356285046 5087.605544804486 4114.500998490722 4264.706427828992 1.034182119460965 1.1156709365365085 1.1425325319349455 1.147609672292828 1.0501272856283643 0.9508056705095635 0.9937297323515505 1.1841202769157035 1.192955630335006 0.9647794210738361 1.0 12.058230717954189 -11.193749180811903 1.637196041387854 1.0002171293373308 1.1048162397974197 0.2028893677301532 0.07574858373829185 0.5619368190236047 2.718237912928298 0.06204171766110789 0.013114002104540189 6.40104409866928e-12 11.193749180811903 0.10459911046008896 ANSNLVLQADRS(ph)LIDR ddPTM_A549_PD325901_60min_R1 2 ANSNLVLQADRSLIDR 16 1 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 1 ANSNLVLQADRS(1)LIDR;ANSNLVLQADRS(1)LIDR 90.22 2.9902999999999996e-06 9941300.0 1665.3000000000002 1918.8700000000001 2273.62 1725.19 2224.5 2105.0 2074.51 2273.0 2616.2 1798.23 2354.6 True False 1834.3600300709359 2080.5799091748504 2427.9215255877334 1831.751068109233 2068.258794108389 2087.8575779105263 2153.456613265429 2227.6632318659963 2506.250212080571 1684.6894509121487 2064.9991270391833 0.8883103174484436 1.007545176136712 1.175749419840633 0.887046897078168 1.0015785319356911 1.0110694724138298 1.0428365731820317 1.0787719968966971 1.2136810031847607 0.8158305874577649 1.0 11.01192545641988 -8.062946103597978 2.369502998625583 1.1021221411627866 0.9993089575241921 0.0 0.1211289889531962 0.40162594062316403 4.470872907898173 0.016857064178496618 0.02294906812844121 8.650752688652311e-09 8.062946103597978 -0.10281318363859449 ANSPS(ph)LFGTEGKPK ddPTM_A549_MK2206_60min_R1 1 ANSPSLFGTEGKPK 14 1 Q5JPT2;Q96B97-2;Q96B97;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 ANS(0.173)PS(0.827)LFGTEGKPK 108.71 4.0908e-06 58010000.0 6113.7 6560.6 6438.5 6055.7 8646.8 7070.3 6218.1 6139.4 9746.7 9807.9 8703.0 True False 7145.5430943857855 6894.506517411738 7351.576114998924 7539.346771850707 7374.867174346695 7818.474453114696 7347.848281609896 7009.678751123956 7539.088012281613 7592.288578117616 6541.804909419323 1.0922892371946404 1.0539150300071731 1.123784065222373 1.152487253325922 1.1273444066985052 1.1951555513153778 1.1232142173836426 1.0715206045094616 1.1524476985589003 1.1605800972734204 1.0 12.675473020479899 -10.851081483144643 0.9279696476047415 0.9945309249586783 1.123506072632675 0.0 0.060097059220451145 0.3711115068520595 0.5261540734189687 0.03410739855790104 0.007011470227043587 1.4090244098195641e-11 10.851081483144643 0.12897514767399676 ANSTQSRLS(ph)K ddPTM_A549_PD325901_60min_R1 2 ANSTQSRLSK 10 1 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 ANSTQS(0.007)RLS(0.992)K;ANSTQS(0.002)RLS(0.998)K 68.809 0.0010909000000000001 19893500.0 5448.299999999999 6145.1 5248.5 5917.0 6724.0 6094.5 6075.5 6135.4 7045.099999999999 7029.200000000001 7891.1 True False 6001.407405173525 6662.969143230323 5604.694771794414 6282.479651517998 6251.729436540711 6044.868412625037 6306.70647714117 6013.024633871808 6749.018946995193 6585.375112389223 6920.54472580434 0.8671871424797435 0.962781024792224 0.8098632396517037 0.9078013220683026 0.9033579991514474 0.8734671405396449 0.9113020328624744 0.8688658006141192 0.9752149887609879 0.95156889714687 1.0 12.756669883548243 -8.837779738762967 5.211705356835803 0.9891364943688375 0.8894643020143693 0.5113047824109418 0.037564866023083864 0.09042342071807644 4.335249797546775 0.005816519841913581 0.006182441621479413 1.4528482721755834e-09 8.837779738762967 -0.09967219235446823 ANSTS(ph)DSVFTETPSPVLK ddPTM_A549_PD325901_60min_R1 1 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANS(0.029)T(0.283)S(0.68)DS(0.009)VFTETPSPVLK 227.46 3.781999999999999e-64 6886100.0 2768.9 3105.5 3368.4 3237.2 4216.5 3634.5 2236.9 3384.3 3286.8 3029.8 3005.9 True False 3049.996689643556 3367.211383753196 3596.999879834675 3437.154491785375 3920.34758613532 3604.9018370146323 2322.026453578648 3316.797481568011 3148.667226154889 2838.497910931096 2636.1933559700487 1.1569700237413878 1.2773006107945948 1.3644673945060737 1.3038324688898224 1.4871244467926128 1.367464882213894 0.8808255465480469 1.2581768609865562 1.19439919648696 1.0767411671465217 1.0 11.364240475747318 -7.727388048759269 24.99962193633275 1.0948719596838639 1.332009403943692 0.5144003958120793 0.11775037279412845 128.97246128217645 94688.06577110114 0.01934356699388782 0.02869033293236563 1.873319920055112e-08 7.727388048759269 0.2371374442598282 ANSTSDSVFTET(ph)PSPVLK ddPTM_A549_PD325901_60min_R1 1 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANSTSDSVFT(0.008)ET(0.6)PS(0.392)PVLK 137.14 5.8767e-13 2472100.0 943.45 1345.0 1458.3 1487.2 1390.8 1457.6 1252.5 1532.4 1802.6 2317.8 2144.7 True False 1039.228349468818 1458.347870277911 1557.2690074702855 1579.0609663237406 1293.1150059995275 1445.729788865739 1300.1645728942992 1501.8350798554561 1726.842990710356 2171.453712441778 1880.9154963734545 0.5525119823152755 0.7753393882339289 0.8279314038683909 0.8395172294386898 0.6874923453460561 0.7686309096039742 0.6912402898488069 0.798459623917771 0.9180864286778636 1.1544663843902094 1.0 10.877219319221496 -8.812217191087706 1.7729404940105562 0.9699009851989945 0.7420716462230791 0.6363903653409897 0.09361322552464656 0.15307123823240446 0.9447739558668445 0.014646978060940915 0.015481451223374954 1.5409296398299013e-09 8.812217191087706 -0.2278293389759154 ANSTSDSVFTETPS(ph)PVLK ddPTM_A549_MK2206_60min_R1 1 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANSTSDSVFTET(0.016)PS(0.984)PVLK 129.32 1.8217e-12 2640700.0 1344.3 1061.5 1172.7 1204.9 2183.1 1216.8 1106.1 1303.0 1866.0 1743.7 1784.2 True False 1571.1849750204963 1115.5258159669177 1339.0064937577442 1500.100554090017 1861.9688819350831 1345.56096835353 1307.0640524096927 1487.704240270143 1443.3539793896903 1349.7969589477555 1341.1338985850805 1.1715347562820713 0.831778107423738 0.9984137267504902 1.118531531916872 1.3883542007994076 1.0033009901346317 0.9745962381449518 1.109288372950454 1.0762191462854334 1.0064595044326408 1.0 10.389237567527953 -10.662003543950524 0.7774187034243942 0.996504156130932 1.07213820882644 0.04128077348259507 0.13176219982956208 2.4721895317764324 2.46989973990006 0.11529111081860012 0.02574607926355059 2.177692001774619e-11 10.662003543950524 0.07563405269550794 ANSTSDSVFTETPS(ph)PVLK ddPTM_A549_PD325901_60min_R1 1 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANSTSDSVFTET(0.038)PS(0.962)PVLK 122.01 2.3886e-10 1661700.0 1152.9 1322.3 1274.8 1408.1 1442.2 1478.3 1252.2 1544.4 1598.8 2267.1 1795.5 True False 1269.9415592798782 1433.7348616122533 1361.315593995145 1495.0751389728732 1340.904847319901 1466.2612149288032 1299.8531562301318 1513.595730441638 1531.6079959767656 2123.9549190942926 1574.6648826122719 0.8064836990414898 0.9105015787446632 0.8645113058829422 0.949456075055561 0.8515493436898285 0.9311576266922054 0.8254792309038833 0.9612176833020344 0.9726564762376122 1.3488298002625057 1.0 10.620829114140934 -8.439568114394895 5.510872194881001 0.9862110712454123 0.8818301235024772 0.3101118102557856 0.1167008102629482 0.1074356066765051 5.434168956977544 0.006161061658678406 0.007432563837681147 3.634392985505021e-09 8.439568114394895 -0.10438094774293505 ANSWQLVET(ph)PEK ddPTM_A549_MK2206_60min_R1 2 ANSWQLVETPEK 12 0 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEK;ANSWQLVET(1)PEK 117.7 2.2519000000000002e-05 12403200.0 3261.6099999999997 3919.8 3123.1000000000004 3324.5 4971.6 3335.9 2931.37 3569.8 5649.9 5358.700000000001 6011.700000000001 True False 3812.0900292915285 4119.301077180521 3566.0025417027477 4139.002649242474 4240.284225838695 3688.902723808794 3463.961984732122 4075.830082053997 4370.206671036339 4148.165948221218 4518.828975520641 0.8436013068744908 0.9115859660756275 0.7891430636168052 0.9159458504989327 0.9383590856855005 0.8163404155794087 0.7665618689038831 0.9019659969725667 0.9671104382818165 0.9179736543898043 1.0 12.14173324091037 -8.70022789553707 3.1498253426976737 0.9856070129895506 0.8571349665818029 0.4053412542656525 0.0547235978901046 0.1346132703701115 2.675309132440416 0.00909882028874622 0.010107854460996806 1.9942155779919338e-09 8.70022789553707 -0.12847204640774768 ANSWQLVET(ph)PEK ddPTM_A549_PD325901_60min_R1 2 ANSWQLVETPEK 12 0 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEK;ANSWQLVET(1)PEK 140.08 3.6326999999999997e-09 4560600.0 4050.0 4014.2000000000003 4194.6 4644.9 4783.9 4515.9 4314.9 4414.6 5510.1 4876.299999999999 5895.2 True False 4461.15301854758 4352.490721836128 4479.270780178881 4931.804923666717 4447.895367559059 4479.124007641872 4479.105880703876 4326.547339813296 5278.529658888903 4568.409585805433 5170.127772751802 0.8628709414222331 0.8418536084881928 0.8663752574522521 0.9539038763527042 0.8603066622455379 0.866346868881706 0.8663433627907944 0.8368356702160361 1.0209669646286912 0.8836163798276684 1.0 12.335984219909752 -8.767168086279067 24.999120144478827 1.009901076840636 0.870654609849352 0.3886844036414846 0.047953673192417424 39.057926774446194 170441.7909084019 0.005183310628035849 0.005591597666877263 1.7093536108592922e-09 8.767168086279067 -0.13924646699128407 ANSWQLVET(ph)PEKR ddPTM_A549_MK2206_60min_R1 2 ANSWQLVETPEKR 13 1 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANS(0.001)WQLVET(0.999)PEKR;ANSWQLVET(1)PEKR 92.211 0.00011079 166308000.0 3151.8 3026.8 2329.8 2293.45 4645.0 2863.3 3155.8 2991.4 4123.2 4130.9 4682.8 True False 3683.7467858882706 3180.8511914919122 2660.200672940046 2855.3453529568837 3961.726653194292 3166.2925054952852 3729.168010663148 3415.4401107782833 3189.3017833974104 3197.726820965351 3519.9315212948186 1.0465393328257682 0.90366848680108 0.7557535301031886 0.8111934381912451 1.1255124223942168 0.8995324159972732 1.0594433409009505 0.9703143626845053 0.906069269843129 0.9084627929889547 1.0 11.781331646806091 -6.686908520914207 24.99999999999838 0.9693010263122922 0.8722064648736038 0.21076648467383585 0.09278759649199633 50.296344931576954 16869.385532875564 0.01295205897229167 0.02696185864370165 2.0563236910588538e-07 6.686908520914207 -0.09709456143868844 ANSWQLVET(ph)PEKR ddPTM_A549_PD325901_60min_R1 4 ANSWQLVETPEKR 13 1 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR 129.05 3.0072e-08 227813300.0 8954.4 8186.699999999999 8114.0 8031.900000000001 8974.2 9249.3 7833.8 7714.1 10101.8 9860.5 11229.7 True False 9863.444096119129 8876.621940226152 8664.664833445724 8528.012221231604 8343.88315130929 9173.97676739564 8131.919545819846 7560.236223905623 9677.256475955774 9237.906347196542 9848.518090933458 1.0015155584878717 0.9013154931804377 0.8797937672899653 0.8659183181155435 0.847222198737764 0.9315083429497073 0.8256998129806035 0.7676521639195214 0.9826104177911449 0.9379996322188772 1.0 13.265690942865447 -8.957138572693841 24.173918631691272 0.9923281859429913 0.8769872925966041 0.33663096357842026 0.05852977408683777 61.741395667092036 34822.387001842915 0.009695616856518749 0.010313404680083458 1.1037263917503308e-09 8.957138572693841 -0.1153408933463872 ANSWQLVET(ph)PEKRK ddPTM_A549_MK2206_60min_R1 2 ANSWQLVETPEKRK 14 2 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEKRK;ANSWQLVET(1)PEKRK 109.38 4.5979000000000005e-06 13374300.0 2713.7 3130.3 2767.2 2838.6000000000004 4442.2 3176.7 2842.2 2806.1000000000004 4752.200000000001 4226.0 4293.6 True False 3171.7062164049094 3289.6188994076683 3159.6305700745534 3534.057127429598 3788.758264546756 3512.8562854772017 3358.590949967299 3203.873268320836 3675.834287704012 3271.3436649155333 3227.3806226683687 0.9827493522541422 1.0192844551095561 0.9790077277783864 1.0950233457458365 1.173942186408198 1.0884542903938006 1.0406553619295287 0.9927162745594919 1.1389528281498034 1.013621895706499 1.0 11.656148017446448 -6.258202367350855 24.91190674851705 1.0708802394378951 0.996240903430869 0.26870699830696176 0.05434156740775582 322.9471236298646 2485367.8929201406 0.008932171059415881 0.02256456031351036 5.518202487614081e-07 6.258202367350855 -0.0746393360070261 ANSWQLVET(ph)PEKRK ddPTM_A549_PD325901_60min_R1 2 ANSWQLVETPEKRK 14 2 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEKRK;ANSWQLVET(1)PEKRK 109.38 4.5979000000000005e-06 18326800.0 4471.1 4254.1 4068.2 4181.5 4914.1 5095.8 4559.1 4665.8 6043.4 4744.8 5994.200000000001 True False 4925.002780550143 4612.607936765252 4344.292516073932 4439.781758124472 4568.950568724672 5054.3014943071075 4732.599045335247 4572.73695875071 5789.416914489609 4445.2125182473665 5256.95140036451 0.9368552998623214 0.8774302034531687 0.8263900852826421 0.8445544613207996 0.8691255103495663 0.9614510596306157 0.9002554303635173 0.8698457738136295 1.1012878898001945 0.8455875239666741 1.0 12.360010682159434 -8.753035420530088 24.999983435745587 1.0478303936155053 0.8845643246312196 0.1096612541565013 0.07411949537423175 76.13234566245428 226477.18389048066 0.00874580497036456 0.009838016001916153 1.7658937906615484e-09 8.753035420530088 -0.16326606898428575 ANT(ph)PELK ddPTM_A549_MK2206_60min_R1 2 ANTPELK 7 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 ANT(1)PELK;ANT(1)PELK 93.325 0.01289 154240000.0 16506.5 18634.7 16822.3 16111.2 23580.0 18657.4 16980.4 19771.6 25644.0 24644.0 25042.0 True False 19292.39365482097 19583.126634760927 19207.95509502932 20058.444723259254 20111.41323623713 20631.713684220205 20065.518882142256 22574.28484798554 19835.674945053164 19076.903283998665 18823.380275959855 1.0249165331616932 1.040361845091733 1.020430699132218 1.0656133186065817 1.0684272931532004 1.09606847344894 1.0659891362747842 1.199268384160316 1.05377858037465 1.0134685165109583 1.0 14.200238108012382 -2.44809924003843 24.610236687709598 1.04805000949453 1.0553066229773302 0.0 0.05318311163992699 0.0 0.0 0.007580209144815919 0.0 0.003563696905705241 2.44809924003843 0.007256613482800267 ANT(ph)PELK ddPTM_A549_PD325901_60min_R1 2 ANTPELK 7 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 ANT(1)PELK;ANT(1)PELK 102.06 0.011411 299220000.0 24542.0 23692.0 23609.0 19839.6 24069.0 20765.0 24114.0 23896.0 24363.0 23332.0 25833.0 True False 27033.4857731345 25688.60798708122 25211.248712450095 21065.047032999228 22378.476473542276 20595.89672461382 25031.671465687115 23419.37553395066 23339.10783461468 21858.81353813598 22655.704768879303 1.1932308462223906 1.1338692946938478 1.1127991368902892 0.9297899689236302 0.9877634221417894 0.9090821466258286 1.1048727780065146 1.0337076587491714 1.0301647233095181 0.9648260233405777 1.0 14.46758675015146 -6.060698079486466 5.01739230221188 1.008477278373628 1.1557927796085699 0.6188900258771292 0.0529935137774323 0.10376293076727976 5.330129102996436 0.007083301124145799 0.01992157080770726 8.695647385881796e-07 6.060698079486466 0.14731550123494186 ANT(ph)PELKK ddPTM_A549_MK2206_60min_R1 4 ANTPELKK 8 1 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 ANT(1)PELKK;ANT(1)PELKK;ANT(1)PELKK;ANT(1)PELKK 93.258 0.0029586 758568700.0 13024.699999999999 15554.5 13660.3 13623.0 17539.800000000003 12244.8 13528.1 12565.7 19713.1 19187.8 20172.4 True False 15222.95093665809 16346.157611358842 15597.53594839166 16960.635611559715 14959.718654832559 13540.536608559582 15985.98065943726 14346.926455842315 15248.114325352026 14853.26265349414 15163.03635008278 1.003951358104802 1.078026671832756 1.0286551841120204 1.1185514048752592 0.9865912281316195 0.8929963825144862 1.0542730552347443 0.9461776734291077 1.005610879859744 0.9795704706210144 1.0 13.888271057107543 -6.80767994685563 24.999055755326122 0.9929722383843186 1.0567313171928998 0.36410102019739043 0.04692485728275077 108.78779866810619 58813.7068267376 0.006289394525898492 0.0118856046399815 1.5571127224758076e-07 6.80767994685563 0.06375907880858123 ANT(ph)PELKK ddPTM_A549_PD325901_60min_R1 5 ANTPELKK 8 1 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 ANT(1)PELKK;ANT(1)PELKK;ANT(1)PELKK;ANT(1)PELKK;ANT(1)PELKK 98.105 0.0015086 1107236800.0 43947.0 41782.5 42968.3 44072.0 46741.200000000004 47372.799999999996 48609.0 49731.9 44322.9 43587.4 47488.0 True False 48408.46708792853 45303.6579106965 45884.3872273781 46794.22734522584 43458.25936038617 46987.01162320179 50458.84209486543 48739.95824057921 42460.16265003666 40835.284125327766 41647.277051234465 1.1623441078363048 1.0877939956305895 1.1017379880785758 1.1235843171129674 1.043483810644423 1.128213293882296 1.2115760181101631 1.1703035994554778 1.0195183372445258 0.9805030968793521 1.0 15.345934553097077 -8.829383451500071 7.307297174600766 1.0088142632310353 1.1260214392595522 0.6369209514789469 0.04309893648323657 0.11448064869399764 10.351763625211928 0.007815363177599685 0.00831100668882027 1.4812097035754816e-09 8.829383451500071 0.11720717602851694 ANT(ph)SGDFEKDDDAYKTEDSDDIHFEPVVQMPEK ddPTM_A549_MK2206_60min_R1 1 ANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEK 33 2 P49792;Q7Z3J3;J3KNE0;A6NKT7;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD3;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 ANT(0.259)S(0.236)GDFEKDDDAY(0.032)KT(0.236)EDS(0.236)DDIHFEPVVQMPEK 42.262 0.017056 2076600.0 441.01 754.04 492.33 484.65 809.58 762.04 598.93 436.91 1132.9 1071.1 952.42 True False 515.4417063406897 792.4174152347567 562.1497971107274 603.3892717567653 690.4918544441408 842.6785669987867 707.7478283245069 498.84333048075837 876.2999588695494 829.1377660887425 715.9078285452318 0.719983335547676 1.10687072223389 0.7852264980158827 0.8428309451272364 0.9644982592902527 1.177076899286268 0.9886018843552716 0.6967982617181856 1.2240401961384388 1.1581627313303737 1.0 9.48363004561556 -7.250823368970074 0.5943009029162188 1.0857754889358249 0.8582969635036434 0.16989678322336121 0.1625861450645469 1.1327279997056583 0.7501703513232918 0.03725116864314805 0.1150469335347028 5.6127620512765526e-08 7.250823368970074 -0.2274785254321815 ANT(ph)SGDFEKDDDAYKTEDSDDIHFEPVVQMPEK ddPTM_A549_PD325901_60min_R1 1 ANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEK 33 2 P49792;Q7Z3J3;J3KNE0;A6NKT7;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD3;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 ANT(0.345)S(0.345)GDFEKDDDAY(0.002)KT(0.148)EDS(0.161)DDIHFEPVVQMPEK 43.65 0.010394 1872400.0 1035.8 753.05 770.2 1028.1 884.31 999.4 638.95 1042.6 851.56 868.45 1207.0 True False 1140.953653484341 816.5121663292045 822.4704035888456 1091.6034020154902 822.1991163038841 991.261217750014 663.2655918968555 1021.8045250961229 815.7718945796695 813.6159187893959 1058.546651803404 1.0778491921357867 0.7713520844245694 0.7769807803818899 1.031228430183751 0.7767244975959595 0.9364360239213279 0.6265813516738976 0.9652900260515821 0.7706527560120956 0.7686160240583356 1.0 10.047869137231297 -11.00936211804885 1.28188362293296 1.000282978266968 0.846305269926733 0.0 0.14445993184565586 0.6257960763382379 1.8252610373289002 0.08388046789024536 0.018888207348298214 9.786736195873083e-12 11.00936211804885 -0.15397770834023494 ANT(ph)SPDAR ddPTM_A549_PD325901_60min_R1 1 ANTSPDAR 8 0 Q9NY74 Q9NY74 ETAA1 Ewings tumor-associated antigen 1 1 ANT(0.5)S(0.5)PDAR 80.688 0.0040926 13901000.0 1499.1 1108.7 988.3 1132.7 1142.1 788.37 963.51 824.16 1059.4 1378.2 1484.4 True False 1651.287528420908 1202.1340399829883 1055.371981130689 1202.6643064516543 1061.8828360311045 781.9497761032401 1000.1769003029032 807.7214822589874 1014.8771021627391 1291.180216794916 1301.8282103868862 1.268437352367842 0.9234198724467108 0.8106845225124183 0.9238271969035287 0.8156858390059982 0.6006551170609945 0.768286393183678 0.6204516662140416 0.7795783606971699 0.9918207383224507 1.0 10.346323367286438 -5.264131051625377 2.746647875967016 0.8396926978649456 1.34892297464169 0.5176955469426758 0.12487414965962068 0.3247166907851706 3.284123610874909 0.01979730415995989 0.3712936560148966 5.443383698608668e-06 5.264131051625377 0.5092302767767444 ANTFVAELK ddPTM_A549_MK2206_60min_R1 2 ANTFVAELK 9 0 G3XAL0;P40926 G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial 0 ; 104.52 0.0016789 6667900.0 4552.5 4734.6 4889.4 4057.0 6542.700000000001 4184.7 3582.0 4480.0 6233.5 5911.5 7768.6 False True 5320.850702061157 4975.570916888336 5582.790441356794 5050.965182125653 5580.277497062281 4627.522176420953 4232.803033840991 5115.053719424593 4821.622202854038 4576.088044284942 5839.442217547392 0.9111916008128518 0.8520627024849835 0.9560485802189522 0.8649739125678163 0.9556182404363337 0.7924596226871383 0.724864272330928 0.8759490254144431 0.8256991033090749 0.7836515670167779 1.0 12.511614854382119 -10.812015605907407 1.0409890301713918 1.0005500298670578 0.8598186848104077 0.0 0.090103266464084 0.4546125963277277 0.8688037145235767 0.046993076604086303 0.011489646743337774 1.541645054589123e-11 10.812015605907407 -0.14073134505665008 ANTFVAELK ddPTM_A549_PD325901_60min_R1 1 ANTFVAELK 9 0 G3XAL0;P40926 G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial 0 107.83 0.0013001 7775300.0 3040.9 3199.2 2845.2 3181.7 3414.0 3324.9 2821.1 2946.5 3712.0 4033.0 3730.9 False True 3349.6099294077358 3468.8078115933768 3038.2923815774902 3378.226382835021 3174.2124176606153 3297.823116767084 2928.458504265154 2887.7297460154664 3555.99754882772 3778.355691723914 3272.0229521237097 1.023712235036025 1.060141650088959 0.9285669526265039 1.0324580335362195 0.9701070145612486 1.007885080581916 0.8949993771787068 0.8825517999930845 1.0867886933738335 1.1547460843059087 1.0 11.675967152990317 -8.794996951969706 24.99999016125855 1.0409835356617316 0.9765140012034319 0.2900930236159974 0.06596718245564628 229.84227040416667 171228.70569150645 0.010722832212751852 0.011415632497864231 1.603256642865401e-09 8.794996951969706 -0.06446953445829973 ANTIPIIGS(ph)PSSK ddPTM_A549_MK2206_60min_R1 2 ANTIPIIGSPSSK 13 0 E9PGM7;O94988-6;O94988-5;O94988-1;O94988 E9PGM7 FAM13A Protein FAM13A 1 ANTIPIIGS(0.82)PS(0.16)S(0.02)K;ANTIPIIGS(0.783)PS(0.177)S(0.04)K 113.47 2.3165e-05 6648900.0 3542.1 4180.2 3948.2 3701.2999999999997 5664.6 4883.1 4071.0 3860.0 6684.1 6046.5 6533.7 True False 4139.919883969429 4392.954324922194 4508.114128638463 4608.118666157673 4831.344843850247 5399.826400860556 4810.648004122465 4407.166820754224 5170.162022314378 4680.59145052337 4911.201969053547 0.8429545170522168 0.8944764138398433 0.9179248088441444 0.9382873470067691 0.983739800214592 1.099491821938077 0.9795255895471836 0.897370307416525 1.0527284471077731 0.9530439757958847 1.0 12.261860438036383 -6.271385630159545 1.0567721535522916 1.0164079867479183 0.8560581810934522 0.44782495743774475 0.05245173634398 0.35417424648180584 0.6685040239494364 0.007970485091045284 0.04224135868707151 5.353211100384539e-07 6.271385630159545 -0.1603498056544661 ANTIPIIGS(ph)PSSK ddPTM_A549_PD325901_60min_R1 2 ANTIPIIGSPSSK 13 0 E9PGM7;O94988-6;O94988-5;O94988-1;O94988 E9PGM7 FAM13A Protein FAM13A 1 ANTIPIIGS(0.826)PS(0.156)S(0.018)K;ANTIPIIGS(0.847)PS(0.132)S(0.021)K 118.47 1.3646e-05 13909400.0 8901.3 8968.099999999999 8225.400000000001 9748.1 10563.900000000001 8791.5 9619.0 10820.8 11080.6 10034.7 10576.099999999999 True False 9804.953423209274 9723.873260549688 8783.625107348344 10350.217997458618 9821.928107476562 8719.904938812539 9985.056308718764 10604.970655246612 10614.92091582447 9401.10732946738 9275.306747421691 1.0571028743534343 1.0483613669437604 0.9469902555826498 1.115889563473006 1.0589329684656326 0.9401203837529641 1.0765203330331221 1.1433552489457597 1.1444280178415833 1.0135629565114554 1.0 13.179179279135823 -7.9313477251479485 24.99999999983392 1.0773753833622854 1.0287085947460413 0.12528601107041548 0.06262488386164085 98.05457599072044 35705.612685163105 0.011269843955105791 0.01557152700483325 1.1712572033314242e-08 7.9313477251479485 -0.04866678861624418 ANTLS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 ANTLSPVR 8 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ANTLS(1)PVR;ANTLS(1)PVR 130.41 1.9832999999999998e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ANTLS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 ANTLSPVR 8 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ANTLS(1)PVR;ANTLS(1)PVR 123.42 5.1204e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ANTS(ph)PDAR ddPTM_A549_MK2206_60min_R1 2 ANTSPDAR 8 0 Q9NY74 Q9NY74 ETAA1 Ewings tumor-associated antigen 1 1 ANT(0.173)S(0.827)PDAR;ANT(0.152)S(0.848)PDAR 63.216 0.009996099999999999 14248400.0 2307.9 2053.5 1654.02 1406.72 1534.69 1045.45 1034.81 1083.44 1565.42 3102.8 3688.8 True False 2697.417097262371 2158.014378792337 1888.584907312341 1751.3664631500606 1308.93913399155 1156.0788250864541 1222.8215822023994 1237.0209378958427 1210.854869462062 2401.8753250118116 2772.7691542992084 0.9728242587667267 0.7782885118461134 0.6811186947835416 0.6316308230833237 0.4720692784547267 0.4169401636966213 0.44101095841548926 0.44613196016618567 0.43669515999361813 0.866237032854927 1.0 11.437111795085311 -5.375977635364866 1.7421387926813856 0.6409777701850753 1.0396114068247946 0.254622056771011 0.18552443064585994 1.157901721700956 4.1069294752035646 0.03584834014844123 0.704871299443438 4.207482948808112e-06 5.375977635364866 0.3986336366397193 ANTS(ph)PDAR ddPTM_A549_PD325901_60min_R1 1 ANTSPDAR 8 0 Q9NY74 Q9NY74 ETAA1 Ewings tumor-associated antigen 1 1 ANT(0.168)S(0.832)PDAR 73.233 0.005281 12805000.0 1200.3 1054.6 994.3 850.91 1185.8 1161.4 1009.5 1116.3 1001.5 1320.4 1383.2 True False 1322.1535723858424 1143.4748431190224 1061.7791772116198 903.4687781431772 1102.5134987879198 1151.941943460943 1047.917074919596 1094.0345207795908 959.4104378100644 1237.0297186591267 1213.0751688272314 1.0899189154651192 0.9426248863246481 0.8752789641536554 0.744775592939246 0.9088583519962744 0.9496047508536587 0.8638517231646033 0.901868696098424 0.7908911685477799 1.0197469624698146 1.0 10.244453235231195 -5.314897950216262 2.782939603452716 0.8892098779593116 1.1146544658428739 0.34638617476061195 0.07688791962792806 0.34257022437728185 3.845871212599773 0.011758253543476259 0.16465959546314768 4.842861509569483e-06 5.314897950216262 0.22544458788356225 ANTTAFLT(ph)PLEIK ddPTM_A549_MK2206_60min_R1 2 ANTTAFLTPLEIK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 ANTTAFLT(1)PLEIK;ANTTAFLT(1)PLEIK 104.17 0.00012255 5432300.0 1870.65 2561.5 2554.3999999999996 2270.1 3753.5 2479.5 2279.5 2855.8 3679.8 3784.7 3872.8 True False 2186.369986998506 2691.8694089489027 2916.6523302249357 2826.2746019086608 3201.365122231383 2741.879044241107 2693.655643674073 3260.6183955207 2846.3311754331075 2929.7336414116935 2911.076876157548 0.7510519577498713 0.9246988394555946 1.0019152548368104 0.9708691051949059 1.0997185091370718 0.9418779238356039 0.9253124387527483 1.1200729263544995 0.9777588488800402 1.0064088878610349 1.0 11.507337223534238 -5.270908735983403 2.0625187692284452 0.9975420302994902 0.6834030568258217 0.6310767263305648 0.056507733912458134 0.32131891230779586 1.4924592239817707 0.007333362776825965 0.18660292810805776 5.359092633495482e-06 5.270908735983403 -0.3141389734736685 ANTTAFLT(ph)PLEIK ddPTM_A549_PD325901_60min_R1 2 ANTTAFLTPLEIK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 ANTTAFLT(1)PLEIK;ANTTAFLT(1)PLEIK 147.68 1.4249999999999999e-12 8093800.0 4720.700000000001 4769.5 4877.1 5015.7 6440.5 4947.4 5325.700000000001 6138.1 4922.5 4756.9 6015.1 True False 5199.941988804339 5171.442503561707 5208.089334384786 5325.508397518817 5988.141498518804 4907.110014705242 5528.372427834866 6015.670780253707 4715.624443454862 4456.548522182369 5275.280832860523 0.9857185150055165 0.9803160566065049 0.9872629532711905 1.0095213063057078 1.135132268450575 0.9302082998383916 1.0479768950683719 1.1403508118053511 0.8939096500949338 0.8447983459803416 1.0 12.3650321832953 -8.799448486908602 24.999977688587787 0.9499018026443646 1.0246629500649787 0.2992592641033649 0.07189353751322738 194.37731241543287 127848.19922222846 0.01198735016944436 0.012761645677578808 1.5869071360434954e-09 8.799448486908602 0.07476114742061402 ANVS(ph)SPHR ddPTM_A549_PD325901_60min_R1 1 ANVSSPHR 8 0 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.5)S(0.5)PHR 43.246 0.021888 158910000.0 1651.5 1556.1 1745.8 1400.0 1732.9 1497.8 1312.4 1468.3 1781.5 1891.8 2127.2 True False 1819.1590642299582 1687.2380081334252 1864.280486348231 1486.4748203693086 1611.1870821804582 1485.6024133940082 1362.3441001728359 1439.0136046409332 1706.6297503331302 1772.3514251433917 1865.5678854318132 0.9751234883682011 0.9044098696750931 0.9993099157132606 0.7967948161935914 0.8636443062523694 0.7963271800479903 0.7302570497762944 0.7713541897232286 0.9148044215705963 0.9500331984612582 1.0 10.865399143446579 -9.42174293670872 1.5344752246919804 0.9765831710881996 0.8552136392723443 0.23618767058685697 0.0802601049439123 0.3353296200943665 1.619758750319391 0.01988169661049188 0.016462446424274916 3.7866665501438207e-10 9.42174293670872 -0.1213695318158553 ANVS(ph)SPHREFPPATAR ddPTM_A549_MK2206_60min_R1 6 ANVSSPHREFPPATAR 16 1 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.609)S(0.391)PHREFPPATAR;ANVS(0.5)S(0.5)PHREFPPATAR;ANVS(0.5)S(0.5)PHREFPPATAR;ANVS(0.755)S(0.245)PHREFPPATAR;ANVS(0.571)S(0.429)PHREFPPATAR;ANVS(0.5)S(0.5)PHREFPPATAR 124.25 1.831e-08 118620000.0 15732.640000000001 18973.6 16759.1 14285.3 21712.3 16740.199999999997 15635.76 15954.8 24370.1 25678.3 25278.3 True False 18387.92500588147 19939.27519720199 19135.792384698056 17785.199141291476 18518.449432109894 18511.636852754567 18476.575199444327 18216.441759525773 18850.31126105288 19877.554195646117 19001.000464411634 0.9677345695728791 1.0493802805040566 1.0070939380554662 0.9360138259352542 0.9746039145041049 0.9742453765751108 0.9724001235645701 0.9587096107725843 0.9920694068903902 1.0461319777806566 1.0 14.213787762687023 -8.980283793500808 20.576117039577827 0.9965013451524696 0.9807831697194784 0.12732289475659375 0.031168550486585896 43.84590155217769 45761.46840883013 0.005034926826268252 0.00514592673426914 1.046444516325017e-09 8.980283793500808 -0.015718175432991144 ANVS(ph)SPHREFPPATAR ddPTM_A549_PD325901_60min_R1 1 ANVSSPHREFPPATAR 16 1 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.604)S(0.396)PHREFPPATAR 70.907 0.00053742 6447600.0 1038.7 1000.5 1160.5 1252.0 1040.7 1240.9 1139.8 1356.8 1306.7 1333.4 1524.8 True False 1144.148059349474 1084.8156462550553 1239.2585086534084 1329.3331965016957 967.6048222200947 1230.7945218190846 1183.175712722492 1329.7375596109912 1251.7839431716548 1249.2088964405325 1337.259266503587 0.8555917973490482 0.8112231288487732 0.9267152149886293 0.9940728995487802 0.7235730919629407 0.9203858613274999 0.8847766041779143 0.9943752815321578 0.9360817116972261 0.9341560965262391 1.0 10.385063485498854 -8.566051462987621 0.2903284692446101 1.0092616606526952 0.8440087216413626 0.22454241695902655 0.07122931084607394 1.2961522698127248 0.35229677157411204 0.0669879808200895 0.07192626061489409 2.716117395539174e-09 8.566051462987621 -0.16525293901133253 ANVSS(ph)PHR ddPTM_A549_MK2206_60min_R1 4 ANVSSPHR 8 0 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.161)S(0.839)PHR;ANVS(0.066)S(0.934)PHR;ANVS(0.161)S(0.839)PHR;ANVS(0.083)S(0.917)PHR 98.58200000000001 0.0024311 305021000.0 7330.19 8298.8 6873.66 4767.77 4351.08 3145.7699999999995 3536.88 4137.12 5053.1 11315.0 11575.6 True False 8567.346866060767 8721.173472959257 7848.448346450801 5935.873864033329 3711.041895840823 3478.6532934068755 4179.485313883728 4723.569429398629 3908.5809181425716 8758.933641391206 8701.059049692558 0.984632654155299 1.0023117212688506 0.9020106979653376 0.6822013079250469 0.4265046214083501 0.39979653896611467 0.4803421388148613 0.5428729310330943 0.44920749253858666 1.0066514422403205 1.0 13.086975293985798 -2.624525579243612 13.378757435840473 0.7027045275524113 0.980461672982323 0.0 0.25180280004174804 0.0 0.0 0.0375901715301287 0.0 0.0023739655958774962 2.624525579243612 0.2777571454299117 ANVSS(ph)PHR ddPTM_A549_PD325901_60min_R1 1 ANVSSPHR 8 0 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.127)S(0.873)PHR 68.893 0.0022513999999999998 178990000.0 1534.5 1157.6 1214.5 1184.8 1476.8 1011.0 1005.3 1148.3 1207.3 1631.9 1501.3 True False 1690.281310360806 1255.1550145975525 1296.9232733817873 1257.9824051239693 1373.074662683421 1002.7667511959818 1043.557241621268 1125.3962556760766 1156.5613794988435 1528.8615554982034 1316.6496175248133 1.2837745804676477 0.9532946335085979 0.9850177724730519 0.9554420465247746 1.0428550195948727 0.7616048627129031 0.7925853831811875 0.854742401240904 0.8784124220330374 1.1611757107956557 1.0 10.362655756062328 -2.5051534209913853 1.0991054182821605 0.9196532965125466 199.9999999783138 0.4434774218362174 0.10984818473699993 489.5092465328704 1.3740937681633978 0.013635287196015608 244694.78298279856 0.003124975228085596 2.5051534209913853 199.08034668180127 ANVSS(ph)PHREFPPATAR ddPTM_A549_MK2206_60min_R1 1 ANVSSPHREFPPATAR 16 1 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.023)S(0.977)PHREFPPATAR 138.75 2.2924e-11 37196000.0 5830.1 6309.8 5195.7 5000.5 6692.7 4675.5 4005.0 5081.6 7815.3 8834.9 8954.7 True False 6814.0783477400855 6630.941868665146 5932.528387155375 6225.622724480979 5708.212695766079 5170.258306654282 4732.656658440301 5801.932361747321 6045.147028469584 6839.089953895469 6731.000852852717 1.0123425173616134 0.9851346053321084 0.8813738873084624 0.9249178332584003 0.8480481314078037 0.7681262296175516 0.7031133648474458 0.8619717169235478 0.8981052239664394 1.0160583995464718 1.0 12.71660532413232 -3.654542240248156 8.134357837987757 0.9131421273117076 39.83792291264466 0.0 0.09841055512607207 0.0 0.0 0.014122281115531389 0.0 0.0002215428609335318 3.654542240248156 38.92478078533295 ANVSS(ph)PHREFPPATAR ddPTM_A549_PD325901_60min_R1 5 ANVSSPHREFPPATAR 16 1 Q5QPM7;H0Y555;Q5QPM9;Q92530 Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.167)S(0.833)PHREFPPATAR;ANVS(0.367)S(0.633)PHREFPPATAR;ANVS(0.01)S(0.99)PHREFPPATAR;ANVS(0.023)S(0.977)PHREFPPATAR;ANVS(0.044)S(0.956)PHREFPPATAR 134.29 7.949299999999999e-11 162447000.0 42305.799999999996 44904.4 43419.799999999996 46278.0 52516.7 51329.2 48021.2 48619.1 49412.4 52052.299999999996 59787.3 True False 46600.653672116074 48688.65138000548 46366.52873246811 49136.48695503633 48828.10816477951 50911.192013342 49848.67304420891 47649.35390955391 47335.76866424964 48765.708894698924 52433.84112292097 0.8887514756523346 0.9285730424720247 0.8842863261489995 0.9371140069606072 0.931232713817618 0.9709605652195228 0.9506965726075335 0.9087519222146866 0.9027713333699913 0.9300426566189798 1.0 15.678210616153411 -10.846213826409619 1.0145670653338448 1.001468868511442 0.9228040783822877 0.07670823086503842 0.031794217699957356 0.3425799825657957 0.6067974360715059 0.019899346214280376 0.0045155396048487135 1.4249058634730002e-11 10.846213826409619 -0.07866479012915417 ANVT(ph)PQSSSELRPTTTAALASGVEAK ddPTM_A549_MK2206_60min_R1 1 ANVTPQSSSELRPTTTAALASGVEAK 26 1 Q15147-2;Q15147;Q15147-5;Q15147-4 Q15147-2 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 1 ANVT(0.66)PQS(0.107)S(0.107)S(0.107)ELRPT(0.006)T(0.006)T(0.006)AALASGVEAK 48.449 0.0041652 4071500.0 1476.0 1398.0 1393.7 1288.6 1771.3 1789.3 1532.4 1536.9 1739.5 2011.3 1839.2 True False 1725.112715264638 1469.1522286592085 1591.3476169098383 1604.3070578474512 1510.7441164269205 1978.6425383587855 1810.8172442931132 1754.7602815588502 1345.5060274106997 1556.945933091484 1382.475880662303 1.2478429022849844 1.062696463069852 1.1510852660572066 1.160459347094631 1.0927815360533943 1.4312311455378712 1.3098364098949808 1.2692881706682628 0.9732582291172471 1.1262011546599984 1.0 10.433038595391563 -8.768051124126435 24.997223479991924 0.9873719233864855 1.2127917997930822 0.3472364299724022 0.10645678955211854 92.88081380269954 351156.2463132282 0.017884602643304645 0.019253260186011686 1.7058815648116656e-09 8.768051124126435 0.22541987640659666 ANVT(ph)PQSSSELRPTTTAALASGVEAK ddPTM_A549_PD325901_60min_R1 1 ANVTPQSSSELRPTTTAALASGVEAK 26 1 Q15147-2;Q15147;Q15147-5;Q15147-4 Q15147-2 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 1 ANVT(0.676)PQS(0.104)S(0.104)S(0.104)ELRPT(0.004)T(0.004)T(0.004)AALASGVEAK 81.697 1.1976e-06 9205500.0 2777.7 2678.7 2499.6 2525.7 3404.9 2548.5 2716.6 3678.6 3202.5 3042.3 3101.9 True False 3059.6900591653366 2904.4434498984688 2669.2378873158646 2681.7067527191166 3165.7515702673218 2527.7458609524806 2819.9816995805604 3605.2274371941257 3067.91006199374 2850.208658797833 2720.38596456419 1.1247264539006336 1.0676585924687951 0.9811982277829023 0.9857817190836485 1.1637141242104887 0.929186480844614 1.0366108840119403 1.3252632104987678 1.1277480849983814 1.0477221599893236 1.0 11.409595638218502 ANVVT(ph)TPSTNR ddPTM_A549_PD325901_60min_R1 1 ANVVTTPSTNR 11 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 ANVVT(0.842)T(0.155)PS(0.003)TNR 105.13 0.00019181 29880000.0 6161.4 6393.9 5866.3 5393.5 7274.7 5913.5 6239.9 6204.3 6650.7 6743.0 7162.5 True False 6786.90079221705 6932.736392393998 6264.422394927613 5726.644245472762 6763.750168352574 5865.342416614677 6477.362809104297 6080.550369320805 6371.19420743225 6317.245829232417 6281.557906828398 1.0804486550763652 1.103665124993552 0.9972720920263812 0.9116598669332628 1.0767631642780857 0.9337400854394303 1.0311713917439254 0.968000368620484 1.01426975631418 1.005681380786958 1.0 12.616906695007904 -5.765177037355033 24.992252104384413 0.9989001856978125 1.0920569068209336 0.4341283164045734 0.04313947558540511 54.592247495756304 365049.63007869 0.00523610613084909 0.017242492819202076 1.7172082355576532e-06 5.765177037355033 0.09315672112312112 ANVVTT(ph)PSTNR ddPTM_A549_MK2206_60min_R1 2 ANVVTTPSTNR 11 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 ANVVT(0.026)T(0.972)PS(0.001)TNR;ANVVT(0.021)T(0.887)PS(0.09)T(0.002)NR 115.0 2.3072e-05 35312000.0 4427.0 4085.9 4196.7 3625.3999999999996 5084.700000000001 4289.4 4076.8 4221.7 5891.1 6432.3 5990.3 True False 5174.169370241564 4293.854857710059 4791.855165304956 4513.623162750392 4336.747365661361 4743.301460926719 4817.5017890460485 4820.138903414013 4556.775256153592 4979.238962573635 4502.743186130599 1.1491149186964738 0.9536086514851747 1.0642079655053132 1.0024162996133792 0.9631345129829878 1.0534248267893873 1.0699037430970908 1.0704894114905465 1.011999811623595 1.105823440677395 1.0 12.1365884806049 -11.463916314278352 0.005444199897925579 1.0674011799082119e-05 2.0073863911382728 0.0 0.061181705164513316 29551.0167257947 27.605514552386186 5273.3966901399 4909.897294720456 3.4362415566034406e-12 11.463916314278352 2.007375717126474 ANVVTT(ph)PSTNR ddPTM_A549_PD325901_60min_R1 1 ANVVTTPSTNR 11 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 ANVVT(0.427)T(0.544)PS(0.027)T(0.001)NR 96.551 0.00029841 27826000.0 4816.9 4523.4 4720.7 4479.4 6722.2 5346.9 4556.8 4846.8 5468.0 5290.6 5641.2 True False 5305.908141985639 4904.60279287368 5041.075089875178 4756.082364544484 6250.055862331045 5303.3566191590435 4730.211517576637 4750.126771758954 5238.198975482213 4956.550613100553 4947.368162513141 1.0724708507018343 0.9913559354722173 1.018940762903409 0.9613358473262502 1.2633092296806492 1.0719551173375925 0.9561066333041618 0.9601320572322248 1.0587849546295616 1.001856027343384 1.0 12.272445547503805 -14.999999999963316 0.3219527727525539 0.5894295680937996 1.0434078168758076 0.03461232542587389 0.08227330543130622 164.13508791517188 2.1639241547048775 44.299100731033334 0.027613890195813146 1.000000000084467e-15 14.999999999963316 0.453978248782008 ANVVTT(ph)PSTNRK ddPTM_A549_PD325901_60min_R1 2 ANVVTTPSTNRK 12 1 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 ANVVT(0.003)T(0.987)PS(0.003)T(0.007)NRK;ANVVT(0.02)T(0.979)PST(0.001)NRK 106.14 9.3467e-05 102620000.0 13321.7 12280.8 13890.4 13847.0 14782.0 14185.2 13174.2 14712.3 14537.7 12914.1 15070.9 True False 14674.10917708279 13315.746115471346 14833.086073760713 14702.297741181292 13743.76331513159 14069.680434288071 13675.551390198863 14418.851634923918 13926.731025213565 12098.701522065914 13217.27484230648 1.1102219899455525 1.00745019486541 1.1222499532416672 1.112354696152756 1.039833360439771 1.064491780805917 1.0346725443300544 1.0909095715231232 1.0536764341644937 0.9153703517868764 1.0 13.690137130012989 -10.978640231672184 0.2666240969975118 0.9556415663547765 1.0818793863750984 0.47812347047525694 0.04212663311522824 4.0732418458437625 0.3340361701434963 0.1635545538030608 0.02061213295362165 1.0504122268689504e-11 10.978640231672184 0.1262378200203219 ANYES(ph)PGK ddPTM_A549_MK2206_60min_R1 1 ANYESPGK 8 0 Q6P0N0;G5E9K5;Q6P0N0-2;C9J2Q8 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 ANY(0.009)ES(0.991)PGK 46.843999999999994 0.038794 7657900.0 3981.7 4016.5 4120.3 4800.2 5977.3 4912.7 5037.9 4860.0 7818.8 7235.0 7668.2 True False 4653.71361678131 4220.9226941414245 4704.62049648677 5976.249215489168 5098.04708808143 5432.558653213667 5953.221218366142 5548.919883125785 6047.854284057933 5600.608475074272 5763.97430844643 0.8073793129094688 0.7322938077562483 0.8162112189835231 1.0368278718265058 0.8844673510447191 0.9425022324011555 1.0328327122559158 0.9626899056427946 1.0492507357632581 0.9716574320720403 1.0 12.492848189716813 -6.123038958820735 0.6549828250656003 1.0190058371300854 0.7050489001416382 0.6641856184136559 0.058788705101444766 0.5302744473426014 0.28151921282331743 0.009866007975512465 0.10012657193503113 7.532879862507169e-07 6.123038958820735 -0.3139569369884472 ANYES(ph)PGKIFLR ddPTM_A549_MK2206_60min_R1 2 ANYESPGKIFLR 12 1 Q6P0N0;G5E9K5;Q6P0N0-2;C9J2Q8 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 ANY(0.001)ES(0.999)PGKIFLR;ANYES(1)PGKIFLR 70.98 0.00076814 13888500.0 1682.8000000000002 1833.6499999999999 1835.43 1636.09 2739.7 1852.17 1513.4 1489.1 2819.4 3206.5 3235.6000000000004 True False 1966.8154994900642 1926.9749528476088 2095.7215731540696 2036.932123446872 2336.693759258644 2048.1654000290587 1788.3651902330964 1700.1844851774908 2180.81040165664 2482.1494229890327 2432.111221982899 0.8086864949730878 0.7923054404052077 0.8616882131917588 0.8375160251866123 0.960767640121959 0.842134759922365 0.7353139009716189 0.6990570455044121 0.8966737959782226 1.0205739772728557 1.0 11.247993490307959 -9.440076495672825 1.4676140463277991 0.972583773359221 0.8231363026922842 0.5087027913044129 0.06892733295520222 0.23995950217097875 1.060968859769968 0.01730893389742407 0.0141243358115312 3.630141086336164e-10 9.440076495672825 -0.14944747066693675 ANYES(ph)PGKIFLR ddPTM_A549_PD325901_60min_R1 2 ANYESPGKIFLR 12 1 Q6P0N0;G5E9K5;Q6P0N0-2;C9J2Q8 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 ANYES(1)PGKIFLR;ANYES(1)PGKIFLR 91.81200000000001 7.4945e-05 34812000.0 2883.5 3165.3 2674.74 3319.9 3266.1000000000004 3555.7 3244.2 3146.8 3771.5 3220.7 3737.7 True False 3176.2307972794924 3432.0509396213156 2856.2639409182416 3524.9626829600475 3036.700403433317 3526.7435580885763 3367.6598062943576 3084.034605383157 3612.9969707445402 3017.344452351899 3277.986595232462 0.9689578358554106 1.0469996871289609 0.8713470473224088 1.0753438370025032 0.926391952868241 1.0758871202273703 1.0273561860174527 0.9408319759051514 1.102200044380694 0.9204871236326457 1.0 11.67859423945602 -7.303062212936228 1.0618624752428205 1.0413996206424332 0.9787912657580449 0.0 0.07557468932715145 0.7796488306108731 1.73641009755659 0.011301365682867054 0.02448694499244224 4.9766578895976876e-08 7.303062212936228 -0.06260835488438832 APAASEGNHTDGAEEAAGSCAQAPSHS(ph)PPNKPK ddPTM_A549_PD325901_60min_R1 1 APAASEGNHTDGAEEAAGSCAQAPSHSPPNKPK 33 1 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 APAASEGNHTDGAEEAAGS(0.002)CAQAPS(0.296)HS(0.702)PPNKPK 84.537 1.3469000000000001e-05 6175900.0 415.07 721.36 728.46 562.44 492.28 828.85 755.65 528.36 591.4 520.59 904.87 True False 457.20760084161583 782.1515388131403 777.8976761858355 597.1806414060813 457.7039510738045 822.1001204043414 784.406674257546 517.8214453095984 566.5455146488987 487.7198585555547 793.5767264435339 0.5761353447077785 0.985602919982802 0.9802425528178416 0.7525178366588263 0.5767608043711598 1.0359428307438363 0.9884446558468467 0.652515916929985 0.7139139742516261 0.6145843776710832 1.0 9.632225905599247 -7.2919710055823845 24.997134354607116 0.8650441931459915 0.7962299123146722 0.004682396693183488 0.18131532089847632 2343.5336388241003 1918713.8140401081 0.02749490766897295 0.043956811805691526 5.105390835060322e-08 7.2919710055823845 -0.06881428083131924 APAEGVLT(ph)LR ddPTM_A549_MK2206_60min_R1 2 APAEGVLTLR 10 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 APAEGVLT(1)LR;APAEGVLT(1)LR 101.93 0.00043666 14633900.0 1188.35 760.1200000000001 938.13 825.1800000000001 1204.19 837.98 1139.8 1033.13 1373.85 1115.3 1422.85 True False 1388.9144276319328 798.8068612649777 1071.170940555089 1027.3491370437382 1027.0552461808475 926.6544873938947 1346.8869061898265 1179.5793413279307 1062.6751685876338 863.3529553905097 1069.5170763377319 1.2986369814569858 0.7468855607245402 1.0015463654147723 0.9605729162937854 0.9602981279155605 0.8664232744810106 1.2593411886436368 1.1029083755886133 0.9936028064427673 0.8072362512871933 1.0 10.06274380199542 APAEGVLT(ph)LR ddPTM_A549_PD325901_60min_R1 2 APAEGVLTLR 10 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 APAEGVLT(1)LR;APAEGVLT(1)LR 107.03 0.00029377 26032000.0 1328.88 1671.4299999999998 2040.5099999999998 1917.68 1740.8 1638.3600000000001 1732.83 1583.18 2128.7400000000002 1736.27 1663.75 True False 1463.7869193302495 1812.2872719840952 2178.991279183428 2036.1307382327268 1618.5322134339783 1625.0177393565273 1798.7737938909604 1551.602232919316 2039.2764606927578 1626.6416158863083 1459.1192973802097 1.003198930997911 1.242041877753234 1.4933606067000278 1.3954518605082655 1.1092528324037576 1.113697654656601 1.2327804841732863 1.0633827101767181 1.3976077654200016 1.1148105701890711 1.0 10.51088212727553 -6.771461957568581 24.992440098024186 1.1754642659348484 1.295540175207877 0.1434415353486559 0.14933232934412108 401.82006270595895 1001985.5885380086 0.026255219593056045 0.0500355484695281 1.6925364972609725e-07 6.771461957568581 0.12007590927302858 APAGPSLEETSVS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 APAGPSLEETSVSSPK 16 0 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 APAGPSLEETS(0.01)VS(0.495)S(0.495)PK 158.81 1.2714e-41 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 APAGQEEPGT(ph)PPSSPLSAEQLDR ddPTM_A549_MK2206_60min_R1 2 APAGQEEPGTPPSSPLSAEQLDR 23 0 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 APAGQEEPGT(0.998)PPS(0.002)SPLSAEQLDR;APAGQEEPGT(0.986)PPS(0.011)S(0.003)PLSAEQLDR 97.06299999999999 2.9138e-07 4289600.0 1760.0900000000001 1590.8200000000002 1619.29 1765.88 2383.05 1972.56 1701.3 2006.62 2408.36 2302.09 2668.2 True False 2057.1501619309865 1671.7859430584003 1848.9296710812464 2198.5206792733647 2032.5065018072462 2181.294989920644 2010.4041880161005 2291.06453001602 1862.8703053606387 1782.0462701290573 2005.612301426247 1.0256968210995163 0.8335538936760343 0.9218779071939381 1.0961842813339024 1.0134094711933477 1.0875955379658693 1.002389238730958 1.1423267240566783 0.9288287193072656 0.8885297865703129 1.0 10.969827034746046 -4.915812883989564 21.38314387884365 0.9868782143581729 3.47789588668594 0.009597488920365271 0.08951803305352003 4513.369493787869 1087757.3861286957 0.011599181676178908 27865.074432237358 1.2139117523401164e-05 4.915812883989564 2.491017672327767 APAPAAPRS(ph)PNLAGK ddPTM_A549_MK2206_60min_R1 2 APAPAAPRSPNLAGK 15 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APAPAAPRS(1)PNLAGK;APAPAAPRS(1)PNLAGK 135.08 4.0505e-10 106895000.0 4833.9 5881.5 5754.200000000001 5742.5 6583.5 5174.6 5368.700000000001 4996.2 7221.299999999999 8396.7 7976.9 True False 5649.744142491691 6180.843228082357 6570.2320852569355 7149.412757790622 5615.075871109715 5722.172737378517 6344.123296421584 5704.426650220791 5585.687080046499 6499.879638238586 5996.015578759852 0.9422497437306891 1.0308250782364932 1.0957663466604681 1.1923606041179309 0.9364678589229205 0.954329197817399 1.0580565065399197 0.9513695512113112 0.9315664722141664 1.0840331471558564 1.0 12.549788416341853 APAPAAPRS(ph)PNLAGK ddPTM_A549_PD325901_60min_R1 4 APAPAAPRSPNLAGK 15 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APAPAAPRS(1)PNLAGK;APAPAAPRS(1)PNLAGK;APAPAAPRS(1)PNLAGK;APAPAAPRS(1)PNLAGK 119.23 1.927e-07 186565000.0 10858.099999999999 10764.3 10448.6 11874.300000000001 13599.9 12674.9 11582.6 13802.4 14037.199999999999 11967.0 14519.500000000002 True False 11960.406318689254 11671.445338314135 11157.704828535978 12607.748542508052 12644.68994110797 12571.679816749695 12023.382181241921 13527.10030422666 13447.265299677916 11211.401577699002 12733.693546693881 0.9392723544689514 0.9165797257108058 0.8762347536966534 0.9901093108826599 0.9930103857722397 0.9872767685707144 0.9442179629306077 1.0623076685977555 1.0560380812030226 0.8804516565902342 1.0 13.636363328922705 -6.855397235738625 0.7479351143597371 1.0263382122511213 0.9080783318544493 0.10834926201616013 0.05642301664171367 0.4213365311734349 0.42384976651986367 0.006957893761839532 0.026623750689460733 1.3950917300140803e-07 6.855397235738625 -0.11825988039667201 APAPAPPGT(ph)VTQVDVR ddPTM_A549_MK2206_60min_R1 1 APAPAPPGTVTQVDVR 16 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;H0YFG1 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 APAPAPPGT(0.997)VT(0.003)QVDVR 101.78 1.2616e-06 46060000.0 3506.6 3851.2 2697.3 2980.5 4784.2 2889.7 2714.5 2728.3 4878.6 4999.4 5298.1 True False 4098.428351861099 4047.209630194812 3079.8176989961294 3710.722633799728 4080.4505175914182 3195.486135972384 3207.6895129428694 3115.044880068326 3773.604889523333 3870.032067765903 3982.43554987872 1.0291260964627316 1.0162649412664229 0.7733502929105586 0.9317721749226383 1.0246118151781975 0.8023949404704612 0.8054592403988949 0.7821959303680862 0.9475620740775713 0.9717751911600326 1.0 11.959435298610352 -8.980033919905267 13.00004454481057 0.9768916331565389 0.893098841473526 0.12663901041809889 0.09321140214122468 1.125270952601964 729.2049697725346 0.017092898351759738 0.017579902896769604 1.0470467668733587e-09 8.980033919905267 -0.0837927916830129 APAPAPPGT(ph)VTQVDVR ddPTM_A549_PD325901_60min_R1 2 APAPAPPGTVTQVDVR 16 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;H0YFG1 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 APAPAPPGT(0.5)VT(0.5)QVDVR;APAPAPPGT(0.914)VT(0.086)QVDVR 220.64 2.1581e-47 211221000.0 14439.5 14270.4 14884.9 15289.9 15439.8 13577.6 12840.5 17216.6 15903.7 17070.3 17568.1 True False 15905.38741020192 15473.016689973156 15895.078824175022 16234.32239711763 14355.36171241839 13467.028527238932 13329.152254091205 16873.20140683859 15235.322795606518 15992.47834476437 15407.335073361539 1.0323256640080145 1.0042630095534937 1.0316565939853393 1.0536749100229479 0.931722562277369 0.8740660512097713 0.8651173087769474 1.0951408096531539 0.9888356891742803 1.0379782271636653 1.0 13.911329727520037 -6.744074423848192 24.99829811986593 0.9794520482223329 1.0286914347947234 0.16039308107268369 0.06397382274101164 439.4899553695217 632678.9604198172 0.009325071659663084 0.019376171870210682 1.8027087891523574e-07 6.744074423848192 0.049239386572390464 APAPAPPGTVT(ph)QVDVR ddPTM_A549_MK2206_60min_R1 1 APAPAPPGTVTQVDVR 16 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;H0YFG1 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 APAPAPPGT(0.153)VT(0.847)QVDVR 218.34 1.0716999999999999e-46 43347000.0 2915.3 2868.0 2657.4 2684.2 3826.6 2382.2 2542.7 2854.7 4819.8 3423.0 4738.9 True False 3407.331367758128 3013.9689497815516 3034.2592790243284 3341.829120498318 3263.7122090663674 2634.282822823618 3004.67567675809 3259.3624671520947 3728.122995639028 2649.741922623255 3562.1003430135847 0.9565512028432865 0.84612129349273 0.8518174635297624 0.9381625442002809 0.916232529908246 0.7395307737442847 0.8435123627696838 0.9150114127314646 1.0466080785599055 0.7438706570465496 1.0 11.798512441845327 -8.620447889602515 4.241867347331559 1.0218247094998272 0.8685440592698948 0.0 0.10067845046602363 0.1098598767176301 3.6325328677727167 0.009830777226754846 0.011166165408304653 2.3963602684680077e-09 8.620447889602515 -0.15328065022993242 APAPLGTVADSLRAS(ph)DGQLQAK ddPTM_A549_MK2206_60min_R1 2 APAPLGTVADSLRASDGQLQAK 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 APAPLGT(0.006)VADS(0.181)LRAS(0.813)DGQLQAK;APAPLGT(0.001)VADS(0.112)LRAS(0.887)DGQLQAK 81.055 2.6776e-05 18848600.0 6562.4 7685.7 6304.8 6288.799999999999 9713.900000000001 7349.2 7181.799999999999 7645.3 11038.8 9421.400000000001 10200.8 True False 7669.972684724024 8076.869301721089 7198.915444567084 7829.556282314962 8284.99817792552 8126.887465995865 8486.640097275049 8729.044687749285 8538.52942534132 7293.099196553523 7667.659832242286 1.0003016373355547 1.0533682346937314 0.9388673470223411 1.0211141930673433 1.0805119631269169 1.0598914980321037 1.1068096763485744 1.1384235710410504 1.1135769729164369 0.9511505930253 1.0 12.904570619422069 -6.620642450900373 5.073910301221887 1.0673118726695003 0.999650992328675 0.22444973703499282 0.05530496186655102 0.23584589014899096 9.893864439659318 0.007925995410403766 0.016802205253915087 2.395286954016937e-07 6.620642450900373 -0.06766088034082529 APAPLGTVADSLRAS(ph)DGQLQAK ddPTM_A549_PD325901_60min_R1 2 APAPLGTVADSLRASDGQLQAK 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 APAPLGTVADS(0.008)LRAS(0.992)DGQLQAK;APAPLGTVADS(0.003)LRAS(0.997)DGQLQAK 133.95 1.7877e-22 32512000.0 11746.0 11357.1 11766.6 13145.599999999999 15340.3 14493.4 13461.7 14284.0 13699.0 14444.1 13512.0 True False 12938.445273051824 12314.202674745911 12565.152234313837 13957.573856176277 14262.850249162015 14375.370555671452 13973.992360024899 13999.094414418783 13123.278669555737 13532.097060954471 11850.109659625177 1.091841817897664 1.0391636051016437 1.0603405871529528 1.1778434341187152 1.2036049166496197 1.213100213295929 1.1792289490481307 1.1813472462719454 1.1074394285369702 1.141938551595015 1.0 13.53261278927766 -9.959830470871482 0.8816272213420699 1.0113759051693991 1.1417715164203401 0.017216939891330107 0.06794906829536115 0.39031359006738886 0.6175766959912612 0.025451607701622855 0.012810482413882284 1.0969062957071676e-10 9.959830470871482 0.130395611250941 APAPPPKPET(ph)PEK ddPTM_A549_MK2206_60min_R1 1 APAPPPKPETPEK 13 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 APAPPPKPET(1)PEK 96.666 6.5626e-05 10491000.0 4131.9 4270.0 4490.5 4372.6 5614.8 4055.0 4256.8 4302.2 6260.4 5640.2 6336.4 True False 4829.263704743871 4487.324761355379 5127.320423142451 5443.887196293472 4788.870357880584 4484.097408508846 5030.205459088309 4912.050024934925 4842.429395804509 4366.074902710976 4762.897004256533 1.01393410364071 0.942141884937911 1.0765129748890723 1.1429781478432868 1.0054532679587316 0.9414642820328618 1.0561230810980977 1.0313156090810058 1.016698322780631 0.9166847191549758 1.0 12.21762363599788 APAPPVLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 APAPPVLSPK 10 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 APAPPVLS(1)PK 90.685 0.00065675 6429400.0 2298.1 2718.5 2252.6 2852.3 3069.5 2488.3 2445.6 2243.3 3502.6 3793.6 4011.0 True False 2685.963096849365 2856.8600383476823 2572.0525520923456 3551.1136280446144 2617.9806161420634 2751.6102544001405 2889.9338636408506 2561.29464481812 2709.2666925028548 2936.623125230374 3014.9580020315884 0.8908791084451143 0.9475621340073812 0.8530973069472951 1.1778318721692789 0.8683307078831521 0.9126529300063236 0.9585320464475817 0.8495291287945724 0.898608435234339 0.9740179210627712 1.0 11.557922190375255 APAPPVLS(ph)PK ddPTM_A549_PD325901_60min_R1 1 APAPPVLSPK 10 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 APAPPVLS(1)PK 93.345 0.00060108 10163000.0 9446.3 10010.0 9488.0 10238.0 11087.0 10348.0 9581.5 10673.0 10522.0 10329.0 10877.0 True False 10405.281422001479 10853.577830098058 10131.912735978925 10870.37800781499 10308.287368073601 10263.729318868462 9946.129225697985 10460.118642193482 10079.796931240644 9676.825177241837 9539.197954983949 1.0907920635576105 1.1377872522739068 1.062134655742761 1.139548425256815 1.0806241171133077 1.075953069356944 1.0426588558738763 1.096540683142903 1.056671323816511 1.0144275465198813 1.0 13.219652255818454 -10.433452668874306 0.16229044547605245 0.9248306787543014 1.135228279365519 0.6349845683639364 0.02551936759651456 3.9794571735505126 0.20215856257640732 0.20408656136017667 0.06317996848659233 3.6859321040554615e-11 10.433452668874306 0.2103976006112177 APAPQPPSLPDRS(ph)PRPQR ddPTM_A549_MK2206_60min_R1 4 APAPQPPSLPDRSPRPQR 18 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 APAPQPPS(0.005)LPDRS(0.995)PRPQR;APAPQPPSLPDRS(1)PRPQR;APAPQPPS(0.003)LPDRS(0.997)PRPQR;APAPQPPS(0.001)LPDRS(0.999)PRPQR 88.09 1.4515e-05 282964000.0 15242.0 17362.4 16366.7 13902.7 22478.6 17322.9 15876.8 15897.0 25728.4 23860.100000000002 25256.699999999997 True False 17814.476968877792 18246.071999193595 18687.744164223466 17308.86212411592 19172.02771722135 19155.99777998963 18761.40904737203 18150.448432520698 19900.958479812267 18470.086838440857 18984.76434054131 0.9383564973116675 0.9610902548961188 0.9843548136289705 0.911723833577088 1.0098638768077908 1.0090195188297733 0.9882350241929361 0.9560533966577104 1.048259442299974 0.972889971512505 1.0 14.21255447032407 -7.260612595265641 0.658046054433281 1.019495677741341 0.9488484961752612 0.15241691181689188 0.0331448828170898 0.5926849411167052 0.49024016619794003 0.0066250478160662435 0.01916714240566613 5.4876626392208166e-08 7.260612595265641 -0.07064718156607985 APAPQPPSLPDRS(ph)PRPQR ddPTM_A549_PD325901_60min_R1 6 APAPQPPSLPDRSPRPQR 18 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 APAPQPPS(0.003)LPDRS(0.997)PRPQR;APAPQPPSLPDRS(1)PRPQR;APAPQPPS(0.005)LPDRS(0.995)PRPQR;APAPQPPS(0.003)LPDRS(0.997)PRPQR;APAPQPPS(0.017)LPDRS(0.983)PRPQR;APAPQPPS(0.001)LPDRS(0.999)PRPQR 87.319 1.5771000000000001e-06 361084000.0 19792.000000000004 20858.8 20773.6 22112.8 23621.8 23185.5 23186.9 22400.100000000002 23993.300000000003 24340.799999999996 26221.399999999998 True False 21801.26926989969 22616.64427996498 22183.421417804784 23478.657434187448 21962.686258786034 22996.684975128013 24069.290167858537 21953.312432961513 22984.945039948318 22803.91773397309 22996.334031149767 0.948032379437901 0.9834891182798756 0.9646503389521195 1.0209739257737493 0.9550516281871884 1.0000152608662656 1.0466577035824665 0.9546440055716957 0.999504747531236 0.9916327403787039 1.0 14.489116271300759 -2.2879438281238915 0.4810785757759981 0.9990095198319268 4.478392623280818e-09 0.2138203252604679 0.025811976650996694 64.62825964304146 0.8592305065323281 0.004473707879392532 63.48215145794557 0.005152952888347301 2.2879438281238915 -0.9990095153535341 APAPS(ph)PAKEER ddPTM_A549_MK2206_60min_R1 6 APAPSPAKEER 11 1 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 APAPS(1)PAKEER;APAPS(1)PAKEER;APAPS(1)PAKEER;APAPS(1)PAKEER;APAPS(1)PAKEER;APAPS(1)PAKEER 78.469 0.0002927 298671600.0 17877.61 19318.399999999998 18310.6 16671.3 24287.6 19217.199999999997 17106.17 17632.3 24546.9 26443.3 27706.6 True False 20894.913502399886 20301.62404444211 20907.318414428708 20755.769248403092 20714.92621358917 21250.751348655038 20214.139663149 20131.732521654067 18987.066343344468 20469.74016433056 20826.28655674105 1.0032952079801583 0.9748076782258084 1.0038908452290276 0.9966140239093592 0.9946528948956656 1.0203812038578042 0.9706070070665616 0.9666501258784336 0.9116875584907735 0.9828799823992106 1.0 14.34611800127222 -7.9514079564947435 5.96516002808051 0.958214166524396 0.9977887804779235 0.32105684630892695 0.022790403364594564 0.2120712672067509 17.394362066691922 0.005095848891231466 0.007042386338707667 1.1183868281393628e-08 7.9514079564947435 0.03957461395352757 APAPS(ph)PAKEER ddPTM_A549_PD325901_60min_R1 4 APAPSPAKEER 11 1 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 APAPS(1)PAKEER;APAPS(1)PAKEER;APAPS(1)PAKEER;APAPS(1)PAKEER 92.06299999999999 8.208899999999999e-05 445722100.0 18331.1 18260.7 18849.5 19523.600000000002 20405.699999999997 18875.600000000002 19605.0 21303.699999999997 19379.4 19627.8 21797.1 True False 20192.059777357423 19799.593274932224 20128.74042125155 20729.52843068731 18972.474027843353 18721.883371785247 20351.079003267652 20878.780991070653 18564.951211678857 18388.497358298704 19116.194883201297 1.05628028489611 1.0357497083444926 1.0529679438945272 1.0843961655205638 0.9924817226317231 0.9793729079544717 1.064598845513525 1.0922038155939842 0.9711635252260974 0.9619329302013933 1.0 14.222507760113954 -8.78585974181809 24.999233585243367 0.9863827702276031 1.042790730081357 0.4322057037025484 0.033778763455449536 182.64253021013997 186971.0730079252 0.0060538118505586765 0.006446180425709929 1.6373452271669806e-09 8.78585974181809 0.05640795985375391 APAPVVLGS(ph)PVVLGPPVGQAR ddPTM_A549_MK2206_60min_R1 4 APAPVVLGSPVVLGPPVGQAR 21 0 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 1 APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR 95.654 1.252e-06 7511300.0 778.01 1156.51 1222.71 1017.2800000000001 1758.29 1417.26 1283.9899999999998 898.692 1888.13 1802.88 1754.6 True False 909.3190674817347 1215.3714191463966 1396.1086637524772 1266.5136456674343 1499.6478701926783 1567.2335124989518 1517.2743627642349 1026.0843431288217 1460.4715697240376 1395.6081558454612 1318.8843955035215 0.689460782599203 0.9215147463189101 1.0585527196411124 0.960291629793608 1.1370578614057718 1.1883024151640038 1.1504225601099574 0.7779941491665651 1.1073537413159409 1.058173226253578 1.0 10.36510239789214 -5.249628210793551 1.692994270985764 1.0506563380100022 0.5519259345473089 0.49556489635883916 0.10673868965635788 0.6247543029845659 1.6722780524353555 0.015008115140043108 0.5088762899977385 5.628229383820446e-06 5.249628210793551 -0.4987304034626934 APAPVVLGS(ph)PVVLGPPVGQAR ddPTM_A549_PD325901_60min_R1 3 APAPVVLGSPVVLGPPVGQAR 21 0 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 1 APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR 186.68 1.696e-44 11325100.0 3284.75 2860.23 2895.2799999999997 3361.16 3751.5199999999995 2852.12 3310.62 3222.63 3268.83 3600.71 3631.5 True False 3618.215401894854 3101.2716200780596 3091.7711115329944 3568.7712194517876 3488.0261772414024 2828.8932803373723 3436.6074557407774 3158.352116545671 3131.452442762528 3373.3605560989868 3184.848521975196 1.136071425981318 0.973757966408618 0.9707749333131622 1.120546611503673 1.0951937441213624 0.8882347969827257 1.0790489506890093 0.9916804817413758 0.9832343425929869 1.0591902669226096 1.0 11.637009041196368 -7.164173718479088 23.2916719761225 0.9925728438207665 1.0530059012275557 0.15393300789786446 0.06689881635695803 35.33000737623172 8454.316369540635 0.008873604621207141 0.01536953575187247 6.852140849109666e-08 7.164173718479088 0.06043305740678917 APASEDS(ph)LS(ph)VEGR ddPTM_A549_PD325901_60min_R1 2 APASEDSLSVEGR 13 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 2 APAS(0.315)EDS(0.691)LS(0.994)VEGR;APAS(0.02)EDS(0.98)LS(1)VEGR 54.523999999999994 0.022675999999999998 6400700.0 1139.42 773.5999999999999 1008.96 1452.1799999999998 1455.18 1223.88 1073.54 1154.87 1216.15 1527.4299999999998 1636.84 True False 1255.0930796033288 838.7939869494355 1077.434092969361 1541.8778604599295 1352.9731768984693 1213.9131270561213 1114.3941521636284 1131.835211872011 1165.0394447755475 1430.9878091271644 1435.5190567836646 0.874313074195903 0.5843140730077004 0.7505536675935137 1.07409083367696 0.9424975380890154 0.8456266193887667 0.776300493467827 0.7884501473689463 0.8115806190590482 0.9968434778799435 1.0 10.4873567673805 -10.665374505240964 0.8540680448708182 1.004022531470734 0.8263646062195729 0.2436951546905174 0.11543491993232997 0.8137221964722882 1.0206194065461631 0.09289789383111861 0.022667970697100605 2.160854350144249e-11 10.665374505240964 -0.1776579252511612 APASEDSLS(ph)VEGR ddPTM_A549_MK2206_60min_R1 2 APASEDSLSVEGR 13 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 APASEDSLS(1)VEGR;APASEDSLS(1)VEGR 177.12 4.1780000000000006e-22 56754000.0 3857.5 5032.2 4480.7 4220.8 6459.9 4704.6 4664.6 4638.700000000001 5921.5 6439.0 6130.8 True False 4508.551693179772 5288.317485735962 5116.130635780954 5254.896189478911 5509.657267377783 5202.437649339268 5512.097440439607 5296.249930422959 4580.289704692414 4984.425427920285 4608.353158527865 0.9783433556598395 1.1475503946458199 1.1101863203156284 1.14029806499413 1.1955805203822178 1.1289147056171327 1.196110031246052 1.1492717133933463 0.9939103074634114 1.0816066513254283 1.0 12.170035565794239 -8.764170860240798 24.939757326180686 0.9971243018331338 1.1352468513003688 0.35199326147666754 0.06042333375339045 34.304221117791 313213.15675307193 0.009027760268233567 0.0098248010255688 1.7211912902695485e-09 8.764170860240798 0.138122549467235 APASEDSLS(ph)VEGR ddPTM_A549_PD325901_60min_R1 2 APASEDSLSVEGR 13 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 APASEDSLS(1)VEGR;APASEDSLS(1)VEGR 197.36 2.2088e-30 70508000.0 3558.3 4006.3999999999996 3669.1000000000004 4129.4 4000.0 3711.8999999999996 3622.6000000000004 3678.3 3349.2 3576.6 4002.7000000000003 True False 3919.535996517988 4344.033388462024 3918.1071900906677 4384.463659452158 3719.053799250868 3681.671517076521 3760.4600253627855 3604.9334209294734 3208.444771156734 3350.7728656136255 3510.393275205867 1.1165518189092722 1.2374776977679995 1.1161447971554954 1.248995003044219 1.059440782751831 1.0487917530723418 1.071236106769904 1.0269314969326513 0.9139844227192963 0.954529194572115 1.0 11.777416951774821 -7.526103548605652 0.8553632406126386 0.9618281958560257 1.1802204385383317 0.6987851166689683 0.054714085154603735 0.22561297025886698 0.33041459279968527 0.010616477911730687 0.021989317711518176 2.9778063479738763e-08 7.526103548605652 0.21839224268230595 APASKPETAAPNDANGTAKPPFLSGENPFAT(ph)VK ddPTM_A549_MK2206_60min_R1 2 APASKPETAAPNDANGTAKPPFLSGENPFATVK 33 2 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 APASKPETAAPNDANGTAKPPFLS(0.001)GENPFAT(0.999)VK;APASKPETAAPNDANGTAKPPFLSGENPFAT(1)VK 144.97 3.1220999999999998e-40 85006000.0 2270.4 3187.5 2897.2 3141.5 3927.1 3255.2 2760.2 2644.29 4518.6 3816.8 4060.8999999999996 True False 2653.588014049345 3349.730135086715 3308.0665248699042 3911.1676410272953 3349.4287921979144 3599.6631033731173 3261.692611392488 3019.126205298491 3495.1443147214636 2954.5822291172744 3052.4664548616497 0.8693258560869644 1.0973847492252093 1.083735586873088 1.2813138813689486 1.0972860281112324 1.1792637713151441 1.0685433106718027 0.9890776032902646 1.1450230056270603 0.9679327431793803 1.0 11.575759725437202 -10.995038087372487 1.1880211342029494 0.9983100449515834 1.1001165129762152 0.132364231897115 0.0997052006782724 0.8775718364969043 2.141864387430281 0.07512448895132062 0.015987533153821943 1.0114907432224107e-11 10.995038087372487 0.10180646802463178 APASKPETAAPNDANGTAKPPFLSGENPFAT(ph)VK ddPTM_A549_PD325901_60min_R1 2 APASKPETAAPNDANGTAKPPFLSGENPFATVK 33 2 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 APASKPETAAPNDANGTAKPPFLSGENPFAT(1)VK;APASKPETAAPNDANGTAKPPFLS(0.001)GENPFAT(0.999)VK 182.08 2.5389999999999996e-76 148854000.0 4133.8 3665.3999999999996 5092.4 4305.4 5672.6 4714.7 4906.8 5510.200000000001 6003.6 5713.0 5855.9 True False 4553.460332857283 3974.296121722417 5438.000887088855 4571.334779727157 5274.176145407621 4676.305046353805 5093.530959103985 5400.294738331723 5751.28957008138 5352.2802050133205 5135.661423608574 0.8866356165780478 0.7738625648981892 1.0588705988464173 0.8901160732116774 1.02697115529507 0.9105555566527198 0.9917964871455669 1.0515285749770482 1.1198731956204844 1.0421793345661285 1.0 12.326334378364157 -6.173575881124801 0.47839486820166033 1.054572659028126 0.7973502541729378 0.4178571641458173 0.07331100246683908 1.528123868027646 0.39124049668868516 0.017141897812655574 0.1890242966147663 6.705391180300162e-07 6.173575881124801 -0.2572224048551881 APASVLPAAT(ph)PR ddPTM_A549_MK2206_60min_R1 2 APASVLPAATPR 12 0 P13861;P13861-2;C9J830 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 APASVLPAAT(1)PR;APASVLPAAT(1)PR 103.97 0.00019727 14545800.0 4661.9 5183.0 4633.6 4468.6 6132.8 4785.4 3960.2 4195.6 7247.2 6315.7 7246.6 True False 5448.714747487952 5446.7925616170805 5290.714154921025 5563.407200603079 5230.673244071037 5291.787851708567 4679.717078340894 4790.339148486118 5605.720771400301 4888.978983555851 5447.069224014484 1.0003020933654034 0.9999492089441083 0.9712955604815638 1.0213579030858828 0.960272952106167 0.9714926750661939 0.8591256850031268 0.879434233618137 1.0291260383999474 0.8975430240544436 1.0 12.411264486429724 APASVLPAAT(ph)PR ddPTM_A549_PD325901_60min_R1 2 APASVLPAATPR 12 0 P13861;P13861-2;C9J830 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 APASVLPAAT(1)PR;APASVLPAAT(1)PR 116.03 2.6515999999999998e-05 16949200.0 5978.4 6093.0 5249.0 6268.4 6637.200000000001 6231.3 5965.5 6821.2 7492.6 6802.2 8294.4 True False 6585.322766934533 6606.478493385358 5605.228704801153 6655.584831430697 6171.025969096964 6180.554358780932 6192.520366946853 6685.145814872119 7177.712078218361 6372.707931129284 7274.24138253368 0.9052934073299627 0.9082017142362501 0.7705585242551856 0.9149524302852459 0.8483394548762614 0.8496493357535783 0.8512943194070838 0.9190162194677717 0.9867299833427171 0.8760649524816312 1.0 12.828581084473537 -8.595887938173457 2.491370617931044 0.9946259184055595 0.8629997490671004 0.3004461597368133 0.05208803609239805 0.10545126612696772 1.310499717002133 0.006368418098989207 0.007292251012308946 2.535782858935376e-09 8.595887938173457 -0.13162616933845905 APAVPPARPGS(ph)R ddPTM_A549_MK2206_60min_R1 2 APAVPPARPGSR 12 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 APAVPPARPGS(1)R;APAVPPARPGS(1)R 44.457 0.020847 6732400.0 1354.8 2235.1 1138.3 1666.4 3065.1 1682.4 1416.6 1287.7 2700.6 2347.1 2305.8 True False 1583.4571183201442 2348.857043116022 1299.7280564888197 2074.668074807539 2614.227850313416 1860.4304513132647 1673.977883232591 1470.2354184158576 2088.918411972024 1816.8884798682545 1733.206223157426 0.9135999497137277 1.3552092138447607 0.7498981016356334 1.1970116695219704 1.5083189844258755 1.073403976085472 0.9658272979098026 0.848274947765588 1.2052336208247556 1.0482817656622434 1.0 10.759227606457342 -11.206059668158296 1.641290128913808 0.9998559898610268 1.1101767472012927 0.006280806395855265 0.2124004131420685 1.305563039642466 6.317583242929007 0.15347705594727054 0.03177159735774906 6.222147925764157e-12 11.206059668158296 0.11032075734026592 APAVRT(ph)LQR ddPTM_A549_MK2206_60min_R1 2 APAVRTLQR 9 1 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 APAVRT(1)LQR;APAVRT(1)LQR 51.286 0.010439 40173000.0 3277.8 3508.9 3301.9 3296.5 3518.6 2995.8999999999996 3258.0 2871.7 4812.9 4759.1 5406.799999999999 True False 3831.012505484031 3687.488022276324 3770.1590702981975 4104.142647985506 3001.018601061236 3312.9241494825283 3849.9364277649197 3278.772269212409 3722.785834621994 3684.0160046615015 4064.1423399113423 0.9426373844887537 0.9073225575944678 0.9276641305777794 1.0098422507699463 0.7384137537679604 0.8151594782860874 0.9472936983424908 0.8067562587593657 0.9160077387208848 0.9064682524731323 1.0 11.988735215681638 -9.960940154442309 0.9173195256443433 0.990600718762639 0.8883299825527367 0.053277703650810526 0.07717979221418111 0.5464088875397354 0.9351414924386571 0.028132529771307712 0.014517774835061746 1.0941071232872598e-10 9.960940154442309 -0.10227073620990235 APAVRT(ph)LQR ddPTM_A549_PD325901_60min_R1 2 APAVRTLQR 9 1 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 APAVRT(1)LQR;APAVRT(1)LQR 74.611 0.00084694 82304000.0 5523.1 6699.1 6856.4 7786.6 6882.3 7671.4 7316.1 8003.1 9066.9 7446.200000000001 8121.4 True False 6083.801046108677 7263.656667493492 7321.7165348825765 8267.560597348333 6398.910990646062 7608.92666184456 7594.518189023532 7843.471892189505 8685.84972399409 6976.045661223563 7122.519285796325 0.8541642081953991 1.0198156545505777 1.027967246011322 1.160763525601881 0.8984055688563347 1.0682914789740514 1.0662685328446164 1.10122157307891 1.2194912186921483 0.9794351382291293 1.0 12.79817190763242 -7.686771032672189 2.3892765936382627 1.1049505464516858 1.004374886409657 0.09898876055750838 0.0958944330872457 0.41459444647574745 4.8406509211558 0.016655911734831497 0.025549895664973385 2.0569747817297707e-08 7.686771032672189 -0.10057566004202867 APDFVFYAPR ddPTM_A549_MK2206_60min_R1 2 APDFVFYAPR 10 0 E7EQR4;P15311;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 E7EQR4;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ; 128.38 4.0546e-06 6591000.0 2652.21 3274.6000000000004 2665.0 2936.9 4744.0 2611.8 3009.0 3066.8 4427.0 4010.8 4097.8 False True 3099.8382076910743 3441.2631530525387 3042.937073304671 3656.440631842451 4046.1638843387996 2888.1789424274743 3555.6963508731274 3501.5282916810997 3424.2915684663203 3104.757494378422 3080.203166473456 1.0063745928941754 1.117219536201069 0.9879014171615662 1.1870777459230824 1.3136029234627657 0.9376585849478782 1.1543707212482568 1.1367848490624148 1.1117096449150181 1.0079716585490945 1.0 11.588809797139737 -10.579590390846796 0.8267423435484285 0.9984992468698076 1.1084939996729062 0.13660417548948944 0.09799357572420551 1.0052444536877967 1.205194182134911 0.06809428279652173 0.0179054484257915 2.6327499255170034e-11 10.579590390846796 0.10999475280309856 APDFVFYAPR ddPTM_A549_PD325901_60min_R1 2 APDFVFYAPR 10 0 E7EQR4;P15311;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 E7EQR4;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ; 117.89 4.7479e-07 8308600.0 2819.3 2955.5 3081.1 3423.7 3748.3 3363.0 3067.0 2891.6 3964.8 3159.3 4052.2 False True 3105.513260541036 3204.570357328152 3290.201974159431 3635.1741732131445 3485.0323389330083 3335.612842999098 3183.716363326797 2833.9247695836843 3798.1732439633984 2959.8212588304887 3553.8050890122204 0.8738558201018877 0.9017293512343025 0.9258251062592581 1.0228963272219131 0.9806481367557703 0.9386032040170867 0.8958612764583863 0.7974339330948995 1.0687623965947721 0.8328597614938895 1.0 11.795148842554685 -8.80037456807173 24.99994775729402 1.0324711507072015 0.922537205893738 0.0 0.08262690508867666 115.1470220286811 73934.39834533441 0.010750787432078914 0.01144517907044148 1.5835268512317388e-09 8.80037456807173 -0.10993394481346352 APDVDVNIAGPDAALKVDVKS(ph)PK ddPTM_A549_MK2206_60min_R1 1 APDVDVNIAGPDAALKVDVKSPK 23 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 APDVDVNIAGPDAALKVDVKS(1)PK 94.275 1.2632e-07 17737000.0 1351.2 1979.0 1884.8 1455.6 2537.5 1418.6 1348.3 1434.1 2674.3 2327.4 2350.1 True False 1579.2495263316937 2079.7226470075634 2152.092981525195 1812.2220653443667 2164.237111405925 1568.7153104095314 1593.268657322111 1637.3880667470546 2068.5753199795545 1801.6387235504985 1766.505310539624 0.8939964781930215 1.177309026244738 1.2182771083024841 1.0258797720742643 1.225151771972202 0.8880331698127346 0.9019325601887982 0.9269080919133341 1.170998642142579 1.0198886540568295 1.0 10.786682370985282 -5.232988287150613 22.524128671431697 1.0680411279507065 0.8939954901625279 0.12244161464266667 0.12001273785527065 3955.5543620257617 3131335.444584835 0.017177163060133095 1.8573716666759377 5.848058560477178e-06 5.232988287150613 -0.1740456377881786 APDVDVNIAGPDAALKVDVKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 APDVDVNIAGPDAALKVDVKSPK 23 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 APDVDVNIAGPDAALKVDVKS(1)PK;APDVDVNIAGPDAALKVDVKS(1)PK 222.57 3.790499999999999e-88 73296000.0 7310.799999999999 8315.5 10475.5 9903.0 10039.2 11392.1 10340.8 12059.4 10334.3 11904.0 10775.6 True False 8052.98703407349 9016.276368249784 11186.430424298822 10514.685818655187 9334.081225359827 11299.32651463872 10734.324802702886 11818.865806583717 9899.985309496304 11152.379408450648 9450.269512156387 0.8521436371433113 0.9540761093270056 1.1837154919136559 1.112633433906788 0.9877052938387524 1.1956618274329418 1.135874991596245 1.250637962375621 1.0475876160739568 1.1801123125752917 1.0 13.206139758790188 -5.544189721036296 7.2624226664594715 1.0691038878401753 0.876276965400221 0.3831051231524457 0.09207464841995684 0.11815538484828937 27.04208341795672 0.013249782658185714 0.05429714512354565 2.8563424809166087e-06 5.544189721036296 -0.19282692243995425 APEAAVSEDGKS(ph)DDELLSSK ddPTM_A549_MK2206_60min_R1 1 APEAAVSEDGKSDDELLSSK 20 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 APEAAVS(0.019)EDGKS(0.956)DDELLS(0.012)S(0.013)K 51.398 0.0035851999999999998 15177000.0 2932.1 3078.5 2448.7 2116.0 3064.0 3055.1 2781.2 2707.4 4007.0 4731.0 4107.8 True False 3426.9667970375654 3235.182500663359 2795.962480825947 2634.4200949908504 2613.2896588562567 3378.3886541887478 3286.508039564088 3091.182241064761 3099.4208978641423 3662.263814177801 3087.7198904874977 1.1098697157067918 1.04775776799902 0.9055104024946099 0.8531927080260253 0.8463493294541246 1.0941370247336 1.0643802404774498 1.001121329233241 1.0037895300712647 1.1860738486869653 1.0 11.592326165851619 -7.274078524028241 24.985722898841153 1.0127630984225044 0.9496944744871775 0.15680636953712568 0.09386604646263767 1293.3768434381009 2556810.916931429 0.012387378874239807 0.0198818152732701 5.320120583971886e-08 7.274078524028241 -0.06306862393532697 APEGRS(ph)PLSAEELMTIEDEGVLDK ddPTM_A549_MK2206_60min_R1 1 APEGRSPLSAEELMTIEDEGVLDK 24 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2;H7BZZ8;B5MCI0 A0A087WVP4 SMTN Smoothelin 1 APEGRS(0.495)PLS(0.495)AEELMT(0.009)IEDEGVLDK 51.175 0.0021875999999999996 667360.0 927.88 734.78 625.52 783.24 1300.0 799.63 664.23 720.84 1136.2 1029.0 982.27 True False 1084.4834595120274 772.177163500868 714.228141873748 975.1338351609792 1108.7717220995862 884.2463158485644 784.9119930676155 823.0212774799155 878.8525141385668 796.5481853284629 738.3452497271421 1.4688026501325793 1.045821265574917 0.9673362727500358 1.320701711728142 1.5016981859222855 1.1976054781626082 1.0630690633652513 1.1146835139578208 1.190300221289904 1.0788288888197355 1.0 9.528151767032991 -11.70876272172082 0.2630057900412915 0.8047126695286984 1.2337145575060575 0.1587850163282022 0.15905852412378754 10.979458789728564 0.626026772717289 1.5156364677851755 0.0954875790309054 1.9554075075778846e-12 11.70876272172082 0.42900188797735916 APEGRS(ph)PLSAEELMTIEDEGVLDK ddPTM_A549_PD325901_60min_R1 3 APEGRSPLSAEELMTIEDEGVLDK 24 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2;H7BZZ8;B5MCI0 A0A087WVP4 SMTN Smoothelin 1 APEGRS(0.871)PLS(0.129)AEELMTIEDEGVLDK;APEGRS(0.838)PLS(0.161)AEELMTIEDEGVLDK;APEGRS(0.829)PLS(0.138)AEELMT(0.033)IEDEGVLDK 95.751 3.4897e-08 5378500.0 2263.15 2479.9300000000003 2630.7200000000003 2683.58 2704.88 2284.83 2371.59 2607.77 2120.45 2449.18 2234.27 True False 2492.903321957025 2688.9224044150906 2809.256479004479 2849.3386417476213 2514.898560129422 2266.2231020129725 2461.842155233845 2555.7559815940094 2031.334860563506 2294.5383568203256 1959.4689542044666 1.2722341513030655 1.3722709914058209 1.4336825663793287 1.4541381916941045 1.28345925294359 1.1565496340987176 1.2563823223386252 1.3043105256197498 1.0366762158720788 1.1710001079103063 1.0 10.936246999745574 -8.344858421049294 0.6166708198926252 0.995922681850944 1.3770506940527956 0.5414390041365953 0.09531690938029613 0.23666434531080005 0.19034092517841036 0.022899605861622627 0.030099803535561333 4.520032723328942e-09 8.344858421049294 0.38112801220185155 APELPNTSSS(ph)PSLK ddPTM_A549_PD325901_60min_R1 2 APELPNTSSSPSLK 14 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 APELPNTSS(0.148)S(0.838)PS(0.014)LK;APELPNTSS(0.133)S(0.734)PS(0.133)LK 147.12 3.505e-13 13250700.0 8112.1 7717.4 8040.0 8842.7 9837.3 8032.6 8458.8 9182.8 8988.8 8666.1 10742.8 True False 8935.634420187613 8367.772382217652 8585.642748447575 9388.893495771204 9146.36198484264 7967.185168800044 8780.704262832964 8999.641850232763 8611.031995394016 8118.920967034122 9421.503704220053 0.9484297518436668 0.8881567788875977 0.9112815764857067 0.9965387469481923 0.9707964112719956 0.8456383841606309 0.9319854386832046 0.9552235113171658 0.9139763954597807 0.8617436475026294 1.0 13.201741621940831 -10.82426775127817 0.8714345167067695 1.0039765149148918 0.9279193871162686 0.0 0.05640029291322348 0.6792161340819062 0.8339537724670382 0.0354126815429157 0.007099951010714457 1.498760534609325e-11 10.82426775127817 -0.07605712779862317 APEPDLMS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 APEPDLMSPTR 11 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 APEPDLMS(0.99)PT(0.01)R 64.55 0.0061463 13502000.0 1066.3 862.82 1128.2 1099.8 1266.6 972.96 889.72 1167.1 1252.7 1210.9 1169.6 True False 1246.2653714679432 906.73385259781 1288.1957246162597 1369.2510493718974 1080.2848178548736 1075.9179814014226 1051.370607277779 1332.5399990938483 968.9654501508381 937.3568489934258 879.1560406821604 1.4175701625173762 1.0313685064306117 1.4652640316464351 1.5574607760295422 1.2287748338925728 1.2238077560913867 1.1958862347826136 1.5157036264687385 1.1021541174863476 1.0662007716697322 1.0 9.77997544062582 -8.929390577171864 7.593847887914444 1.0446573646053061 1.3204559096951747 0.40360393277822004 0.14896527988459501 0.1666854728977084 15.271836569190993 0.025827628692173178 0.027357751958784662 1.1765473847784232e-09 8.929390577171864 0.27579854508986856 APEPDLMS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 APEPDLMSPTR 11 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 APEPDLMS(0.92)PT(0.08)R;APEPDLMS(0.654)PT(0.346)R;APEPDLMS(0.999)PT(0.001)R;APEPDLMS(0.997)PT(0.003)R 145.09 2.2518e-11 55844900.0 16940.1 17201.9 15903.7 16931.199999999997 19361.7 16550.300000000003 15835.199999999999 15651.8 17244.9 22131.8 24552.3 True False 18659.846481357486 18651.5644830733 16983.02071871712 17977.00177045488 18001.80098623889 16415.519844034476 16437.81720135392 15339.612570400428 16520.156823755162 20734.39437096339 21532.5227498531 0.8665889593213034 0.8662043319192846 0.7887148624437416 0.8348767108850507 0.8360284206067635 0.7623593405536501 0.763394860523998 0.7123927255808927 0.7672188259440185 0.9629338193131525 1.0 14.394229735073585 -10.711771458572443 0.9836328177593643 0.9992658799519885 0.7983317180869991 0.6867857189970441 0.04703170855789686 0.24951001706228318 0.43159900230988113 0.03456975518317424 0.009136664932285179 1.9419075105634204e-11 10.711771458572443 -0.20093416186498936 APEPDLMS(ph)PTRK ddPTM_A549_MK2206_60min_R1 2 APEPDLMSPTRK 12 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 APEPDLMS(0.993)PT(0.007)RK;APEPDLMS(0.91)PT(0.09)RK 68.044 0.0018463000000000002 22172000.0 3991.6 4396.1 3213.4 2701.5 4616.0 3865.5 2982.1 3832.6000000000004 4620.1 5030.1 4018.8 True False 4665.284494749546 4619.842712738732 3669.1084395336707 3363.367621274945 3936.9925147782237 4274.544644288769 3523.908969072365 4375.882786845241 3573.65472678366 3893.7969164438314 3020.8210467625377 1.5443763210500026 1.5293334630629285 1.214606354608762 1.11339518932428 1.303285581579737 1.4150274306615636 1.1665401275090408 1.4485739867096545 1.1830077556608667 1.288986290868463 1.0 11.560725006101254 -10.546078506304667 0.04953403783841642 2.3780014478986084e-11 2.193659632415401 0.15077520892733143 0.1548464658932223 68.37837373982951 0.8506235740834936 23.054605969758374 14.93658659059118 2.8439469679471502e-11 10.546078506304667 2.193659632391621 APES(ph)DTGDEDQDQER ddPTM_A549_MK2206_60min_R1 2 APESDTGDEDQDQER 15 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.999)DT(0.001)GDEDQDQER;APES(0.957)DT(0.043)GDEDQDQER 108.71 3.5698e-06 51752000.0 757.75 687.8299999999999 931.14 745.14 1063.44 727.6800000000001 676.97 1162.17 1098.75 1162.1599999999999 908.71 True False 885.639674791178 722.8376090405325 1063.1896534472467 927.699333450606 907.0093847304491 804.6826146051092 799.9666861583851 1326.9111564963555 849.8848793432055 899.6272488448266 683.0522278798612 1.2965914444641105 1.0582464700893544 1.5565276124598864 1.3581674952296248 1.3278770608006547 1.1780689407935596 1.1711647418842581 1.9426203478099768 1.2442458199443684 1.3170694891621928 1.0 9.415852084574887 -9.798975724002853 1.2828376202933862 1.0472078298691616 1.3464546541074278 0.04725334137542214 0.2398490977920892 0.41081958212295916 1.3666373244476244 0.06289804377084958 0.04204069252320319 1.5886355469495156e-10 9.798975724002853 0.2992468242382662 APES(ph)DTGDEDQDQER ddPTM_A549_PD325901_60min_R1 2 APESDTGDEDQDQER 15 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(1)DTGDEDQDQER;APES(1)DTGDEDQDQER 134.88 1.5034e-09 85077000.0 1164.6399999999999 1071.5900000000001 1028.6599999999999 1350.72 1034.53 894.77 971.0899999999999 1012.1099999999999 1070.19 1600.92 1118.28 True False 1282.8733954373467 1161.896650045432 1098.4710534350836 1434.1509066923093 961.86818173475 887.4832897800477 1008.0453613508377 991.9226720650651 1025.213635985974 1499.8376379852832 980.7386493609858 1.3080685626830564 1.184715877978789 1.1200446257020746 1.4623171092795726 0.9807589232477673 0.9049131390491238 1.0278430058891264 1.0114036728453257 1.0453484591985505 1.5292939041023046 1.0 9.937724923054024 -6.794990722009564 24.99947091700002 1.0102920312023655 1.2521572562363616 0.16968486723911935 0.17895643419667343 81.65576292541799 60842.38482838329 0.0118869274959554 0.02246509329955703 1.6032796417683087e-07 6.794990722009564 0.2418652250339961 APES(ph)DTGDEDQDQERDTVFLK ddPTM_A549_MK2206_60min_R1 3 APESDTGDEDQDQERDTVFLK 21 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.851)DT(0.149)GDEDQDQERDTVFLK;APES(0.988)DT(0.012)GDEDQDQERDTVFLK;APES(0.884)DT(0.116)GDEDQDQERDTVFLK 201.82 3.0837e-56 92539000.0 9107.599999999999 9698.3 8675.5 7917.7 11250.0 8171.2 9030.7 8082.0 13773.8 13693.800000000001 13366.300000000001 True False 10644.740220558417 10191.902045211446 9905.816352515827 9857.536855439064 9595.139902784878 9035.870960396423 10671.461294725805 9227.648250086955 10654.056292238854 10600.361069242857 10047.078818886768 1.059486086696976 1.0144144610523445 0.985939946434441 0.98113461963776 0.9550178789030377 0.8993530481129053 1.0621456730950798 0.9184409136654302 1.0604133285200346 1.055068966843976 1.0 13.294488479350738 -8.796365445444541 24.999940538653206 1.0285285055315316 0.9841933267910337 0.18024965224476186 0.050071483652799974 259.9686895469073 186083.45885644865 0.008668144511544247 0.009228106445333192 1.59821261588844e-09 8.796365445444541 -0.04433517874049797 APES(ph)DTGDEDQDQERDTVFLK ddPTM_A549_PD325901_60min_R1 1 APESDTGDEDQDQERDTVFLK 21 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.643)DT(0.357)GDEDQDQERDTVFLK 228.96 1.7603999999999997e-76 95751000.0 3857.3 4174.3 3773.4 4041.7 4181.6 4091.0 4689.9 4274.7 3940.0 4210.5 4797.4 True False 4248.890256405821 4526.082910707124 4029.4856152975203 4291.346629633311 3887.898841736857 4057.684252366729 4868.376710911751 4189.437755062722 3774.4155017190774 3944.6483114315765 4207.350213224234 1.0098732078568171 1.0757561603693158 0.9577252691331322 1.0199642083858542 0.9240730257055139 0.9644275010938986 1.1571123068409725 0.9957425797108094 0.897100386332379 0.9375611992158503 1.0 12.038696195436517 -8.537837716585003 24.291184368441645 0.9511460303855422 1.0150570031261312 0.19239863309990946 0.06291090191314035 237.6254037307071 385866.8768748477 0.011516007146176878 0.013060283007228904 2.8984264443591795e-09 8.537837716585003 0.06391097274058899 APES(ph)DTGDEDQDQERDTVFLKDNHLAIER ddPTM_A549_PD325901_60min_R1 2 APESDTGDEDQDQERDTVFLKDNHLAIER 29 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.999)DT(0.001)GDEDQDQERDTVFLKDNHLAIER;APES(0.998)DT(0.002)GDEDQDQERDTVFLKDNHLAIER 221.01 3.848599999999999e-92 23449000.0 3430.8 3552.5 3966.4 3928.7 4644.6 4674.2 4755.0 4817.4 4549.8 4703.5 4841.9 True False 3779.092290378527 3851.881642499832 4235.5837559008005 4171.3668762749285 4318.379319000148 4636.13486492607 4935.954127035839 4721.313177822807 4358.587728355699 4406.520207295667 4246.376995332974 0.8899568489872611 0.9070983680283884 0.9974582474791956 0.9823355017370135 1.016956177877355 1.0917859789701818 1.1623918772310493 1.111845034722969 1.0264250520257745 1.0377129049395992 1.0 12.052016744730915 -5.8492350719427355 1.1848237292975679 1.0371805423244553 0.8723245624872816 0.5751804703095311 0.050567742308869915 0.515867325983808 1.0673510447758443 0.009091780228825059 0.08052376165651175 1.4150276561562892e-06 5.8492350719427355 -0.1648559798371737 APESDT(ph)GDEDQDQER ddPTM_A549_MK2206_60min_R1 2 APESDTGDEDQDQER 15 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.231)DT(0.769)GDEDQDQER;APES(0.084)DT(0.916)GDEDQDQER 73.156 0.00090975 4995400.0 210.99 0.0 197.21 106.18 140.74 380.44 365.24 132.45 154.16 606.39 371.63 True False 246.5999537897602 0.0 225.17734342454568 132.19410476660133 120.03733243715065 420.6979082843664 431.59938025686284 151.22519311111316 119.24300614293384 469.4060778438546 279.3440145337818 0.8827823076908571 0.0 0.8060933175903593 0.4732304896069816 0.4297114890307923 1.5060208431045168 1.5450461001542901 0.5413582723922123 0.4268679475447056 1.6803870977056075 1.0 8.125899097967356 APESDT(ph)GDEDQDQER ddPTM_A549_PD325901_60min_R1 2 APESDTGDEDQDQER 15 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.175)DT(0.825)GDEDQDQER;APES(0.446)DT(0.554)GDEDQDQER 137.46 8.7121e-10 6514100.0 693.44 746.89 1098.01 946.05 870.01 603.76 729.25 458.52 741.31 758.77 936.4300000000001 True False 763.8375183164527 809.8330415106832 1172.5275614705122 1004.4853598645599 808.903498971562 598.8431787359901 757.0020078109116 449.3744588980187 710.1553186749668 710.8611327075013 821.2550465188574 0.9300856311985094 0.9860920123942131 1.4277264613966534 1.2231101216636422 0.9849601562880481 0.7291805161799266 0.9217623818808759 0.5471801492153148 0.8647195797276119 0.8655790131466531 1.0 9.681686520433875 -6.947178414216534 5.489372058927838 0.8868629764939188 1.1486885403505858 0.4139590601342281 0.16872878261551363 0.18550444949011702 12.131223104232625 0.02620762679843526 0.04987173505051355 1.1293318741132085e-07 6.947178414216534 0.261825563856667 APESDT(ph)GDEDQDQERDTVFLK ddPTM_A549_MK2206_60min_R1 1 APESDTGDEDQDQERDTVFLK 21 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.115)DT(0.885)GDEDQDQERDTVFLK 105.16 3.4239e-10 11620000.0 2931.5 2662.7 2527.1 2314.3 3462.0 2235.9 2352.5 2366.0 3597.6 3670.6 3785.2 True False 3426.2655317061553 2798.220056688753 2885.4807797179105 2881.303603892876 2952.7443860836675 2472.5014539297 2779.9187987467703 2701.3877455711126 2782.7493441866823 2841.4089106575834 2845.230373794555 1.2042137477735064 0.983477500613384 1.014146624573558 1.0126784918474674 1.037787454147597 0.8689986852039108 0.9770452418723896 0.9494442947227483 0.9780400806263907 0.9986568879721768 1.0 11.474329754654505 -5.261298866891432 23.258866761497277 0.9843055752379897 1.2042139081569412 0.695652666617641 0.042224228050877353 1.752978869705476 289307.1488380841 0.005567118930432002 0.04461035770205105 5.47899788903661e-06 5.261298866891432 0.2199083329189515 APESDT(ph)GDEDQDQERDTVFLK ddPTM_A549_PD325901_60min_R1 1 APESDTGDEDQDQERDTVFLK 21 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 APES(0.345)DT(0.655)GDEDQDQERDTVFLK 208.17 2.1052999999999997e-67 106300000.0 4281.6 4141.3 4511.2 4733.4 5127.1 4048.3 4281.3 5383.7 5627.5 4838.9 5455.3 True False 4716.264880052673 4490.301884893613 4817.3571600493415 5025.7713676686335 4766.990183534783 4015.331987009587 4444.227214317251 5276.317880069054 5390.9957451584 4533.3710281881595 4784.3326839959445 0.9857727694875892 0.9385429863425063 1.0069026295273877 1.0504644429264556 0.9963751474643111 0.8392668846882786 0.9289126630310682 1.1028325638220868 1.1268020226084614 0.9475451076704435 1.0 12.224101997121059 -8.260495342447872 24.999920660166943 1.0647733528080534 0.9642409478512227 0.223599568879167 0.06843167668750647 80.14141800221593 2122315.30614117 0.011565923535743728 0.014497453806774769 5.489144423590688e-09 8.260495342447872 -0.10053240495683069 APFHT(ph)PPEEPNECDFK ddPTM_A549_MK2206_60min_R1 1 APFHTPPEEPNECDFK 16 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 APFHT(1)PPEEPNECDFK 83.25299999999999 0.00014799 2810100.0 1435.8 1328.7 1322.7 1280.8 1853.0 1334.3 1272.8 1384.1 1829.7 1820.1 1883.7 True False 1678.1279380602753 1396.3251546634422 1510.278749290839 1594.5960574972974 1580.4261546542573 1475.4947403633416 1504.0512846099414 1580.3004136284756 1415.275871430501 1408.9381458856508 1415.925302524782 1.185181121537945 0.9861573574351767 1.0666373053704261 1.126186568354928 1.1161790469003898 1.0420710313830395 1.06223914632221 1.116090242056266 0.9995413380260082 0.9950653070280812 1.0 10.467529442371404 -8.775891300662432 24.624566132760677 0.9997833951629284 1.083389861584805 0.3970487694822735 0.04884971383850978 139.45422286381753 237614.5714430678 0.007926442898986414 0.008457314723547023 1.675362149065992e-09 8.775891300662432 0.08360646642187664 APGAPPRS(ph)PPQR ddPTM_A549_MK2206_60min_R1 2 APGAPPRSPPQR 12 1 H3BN50;Q15599-3 H3BN50 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 APGAPPRS(1)PPQR;APGAPPRS(1)PPQR 87.51899999999999 7.8134e-05 100364000.0 8616.3 9281.900000000001 9257.3 9083.9 11003.5 9223.4 7382.9 7318.0 11613.099999999999 13164.2 13862.5 True False 10070.52079169018 9754.309063799654 10570.124340976863 11309.455907791762 9384.899726248314 10199.414066002584 8724.277364194486 8355.34891043508 8982.75139230997 10190.39807706603 10420.058664463446 0.9664552874385123 0.9361088433278918 1.0144016153215338 1.0853543412727142 0.9006570911404331 0.978825013796386 0.8372579891462367 0.8018523867749564 0.8620634184090281 0.9779597606124185 1.0 13.34707577949718 -6.812713775353876 24.999846730713564 0.9171317780406568 0.996963121369344 0.2958858028058754 0.067485672662566 132.24101976738274 64476.254287585616 0.011529699190134121 0.021789104790620066 1.5391687054022416e-07 6.812713775353876 0.07983134332868713 APGAPPRS(ph)PPQR ddPTM_A549_PD325901_60min_R1 2 APGAPPRSPPQR 12 1 H3BN50;Q15599-3 H3BN50 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 APGAPPRS(1)PPQR;APGAPPRS(1)PPQR 106.14 4.2206e-05 178519000.0 15260.7 14954.8 14012.0 14306.6 17066.699999999997 16162.6 15397.5 15568.7 16553.3 17391.4 18196.9 True False 16809.955029666424 16215.093479875164 14962.938581000913 15190.286189353961 15867.993868918693 16030.977144292943 15983.460288335295 15258.170065091119 15857.622366651367 16293.304035965113 15958.796659653157 1.0533347462321614 1.016059908882101 0.9375981723503025 0.9518440840691871 0.9943101730869202 1.004522927773262 1.0015454566661965 0.9560977804590146 0.9936602805863441 1.0209606891701086 1.0 13.962064251748743 APGAS(ph)PGNPLS(ph)PSLSDKDR ddPTM_A549_PD325901_60min_R1 2 APGASPGNPLSPSLSDKDR 19 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 2 APGAS(0.994)PGNPLS(0.77)PS(0.125)LS(0.111)DKDR;APGAS(0.995)PGNPLS(0.833)PS(0.091)LS(0.081)DKDR 49.902 0.004838800000000001 8863000.0 3336.2 2955.1000000000004 3159.3 3193.5 3208.8999999999996 3453.8999999999996 3443.8 3078.6000000000004 2705.8 3128.0 3807.8 True False 3674.8885680193666 3204.136647924351 3373.7090964142303 3390.755242035278 2983.517934104029 3425.772583536897 3574.8556935196666 3017.19490788502 2592.0846356729653 2930.497546172182 3339.464739632973 1.1004423925803328 0.9594761130122024 1.0102544447841726 1.015358899225252 0.8934120186074895 1.0258448136551996 1.0704876296770136 0.9034965610137352 0.776197635779754 0.8775351065674858 1.0 11.705401165995976 -8.370873742903024 7.390578892135722 0.8916254064469022 1.0048536265418908 0.4098710330141837 0.06994402888076234 0.28747367703906285 17.391174801626605 0.015165372531975772 0.018338616635656103 4.257221601163739e-09 8.370873742903024 0.11322822009498856 APGAS(ph)PGNPLSPSLSDKDR ddPTM_A549_MK2206_60min_R1 1 APGASPGNPLSPSLSDKDR 19 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 APGAS(0.993)PGNPLS(0.007)PSLSDKDR 74.062 0.00014142 15572000.0 1199.8 1179.1 1066.8 1427.2 1442.9 1075.6 1067.9 1191.8 1322.4 2034.7 1591.0 True False 1402.2969077063099 1239.1111536567043 1218.0882813513779 1776.8640640694434 1230.651321398072 1189.419278074505 1261.9236068785017 1360.7412997344263 1022.8785114388676 1575.0598568394778 1195.9107906338204 1.1725765154799774 1.0361233993047159 1.0185444356646398 1.485783118595095 1.0290494333158742 0.9945719090335534 1.0551987796762794 1.1378284320130998 0.8553133891339441 1.317037917188382 1.0 10.223894059891792 -8.021430379416683 0.9655724723474456 0.9375978077498371 1.1432056643170938 0.0 0.1781093711420642 0.5022369564086794 0.9338181481329136 0.027374949230951313 0.0410371684466848 9.518524247917315e-09 8.021430379416683 0.20560785656725666 APGAS(ph)PGNPLSPSLSDKDR ddPTM_A549_PD325901_60min_R1 1 APGASPGNPLSPSLSDKDR 19 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 APGAS(1)PGNPLSPSLSDKDR 90.475 7.840499999999999e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 APGASPGNPLS(ph)PSLSDKDR ddPTM_A549_MK2206_60min_R1 2 APGASPGNPLSPSLSDKDR 19 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 APGASPGNPLS(0.981)PS(0.007)LS(0.012)DKDR;APGAS(0.012)PGNPLS(0.782)PS(0.072)LS(0.133)DKDR 126.32 1.2845e-15 54278000.0 6951.0 7857.4 7724.3 6824.1 9711.1 7553.400000000001 7556.7 7404.5 10600.7 10482.3 10807.3 True False 8124.158864366188 8257.30809833109 8819.721889428616 8496.004806345494 8282.61005421638 8352.695774458878 8929.654574490847 8454.110550330213 8199.658375839377 8114.341149726476 8123.549143693831 1.0000750559468001 1.0164655807789498 1.0856981023220882 1.045848884036209 1.019580223829387 1.0282076992102558 1.099230695418736 1.0406917470171262 1.0093689630971985 0.9988665060302487 1.0 12.987894457062445 -8.78470036200369 4.5398332807845625 1.0041429100981463 1.0435482987972922 0.2868275236316711 0.027575030035918543 0.18784858578790226 9.018551654790881 0.004880959990296497 0.005277986649200469 1.6417220755284717e-09 8.78470036200369 0.039405388699145893 APGASPGNPLS(ph)PSLSDKDR ddPTM_A549_PD325901_60min_R1 2 APGASPGNPLSPSLSDKDR 19 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 APGASPGNPLS(0.999)PS(0.001)LSDKDR;APGASPGNPLS(0.843)PS(0.145)LS(0.012)DKDR 150.64 1.1717e-21 85689000.0 9643.2 8557.4 9925.8 10134.099999999999 11244.0 11073.099999999999 10475.3 12016.3 12261.9 11589.3 12772.8 True False 10622.170565051363 9278.562130197912 10599.424476684188 10760.060340789008 10454.260229694188 10982.924344874602 10873.943273804109 11776.625469895016 11746.574984905872 10857.549620157683 11201.826573450302 0.9482534384371926 0.8283079611488753 0.9462228688494534 0.9605630180252627 0.9332638888082826 0.9804583451510912 0.9707294790277046 1.0513129615670946 1.0486303200539357 0.9692659986266349 1.0 13.451446377332289 -7.146665806335638 0.783737285386089 1.0248433510252946 0.8993107923662002 0.5203965571712386 0.039760865259916456 0.3119297238492598 0.3683359656952857 0.00677467863564657 0.01935703430092537 7.134017883083847e-08 7.146665806335638 -0.1255325586590944 APGFGDNRK ddPTM_A549_MK2206_60min_R1 1 APGFGDNRK 9 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 56.563 0.015472 6139700.0 3049.0 3278.0 3081.4 2734.9 4062.9 3174.7 2614.1 2802.3 4011.5 4795.0 3727.4 False True 3563.5966591069646 3444.8361985299616 3518.388854664543 3404.950622774327 3465.2527920910866 3510.644646804695 3089.0481325415208 3199.5346066838215 3102.901655049163 3711.8061697278686 2801.783708993404 1.2719028409181723 1.2295153931663008 1.2557674753304184 1.2152796134279837 1.2368023916221738 1.2530034476023002 1.102529121939724 1.1419634557848568 1.1074736586872158 1.3248011107400606 1.0 11.45212987212006 -8.653372541091455 0.3316554147366325 0.988915489619132 1.2786275443667425 0.0 0.09955950284226614 0.2527292928987406 0.08217847019982404 0.023079599329417822 0.02318642368017977 2.221403536370183e-09 8.653372541091455 0.2897120547476105 APGFGDNRK ddPTM_A549_PD325901_60min_R1 4 APGFGDNRK 9 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;;; 71.37899999999999 0.0031618 16834700.0 9002.099999999999 9137.2 8506.5 9194.2 11370.099999999999 10547.1 9516.8 10308.6 10722.6 11822.900000000001 10696.4 False True 9915.986565004241 9907.223911006196 9083.802243739963 9762.104852456789 10571.503400715572 10461.207914479855 9878.967031792778 10102.986886059747 10271.966410845935 11076.400076291267 9380.810610066224 1.0570500756473793 1.0561159715105106 0.9683387311958359 1.0406461934090654 1.126928560882751 1.1151709963373841 1.053103771351273 1.076984421284295 1.0949977393023416 1.1807508473100996 1.0 13.19549687825494 -5.548427580305034 24.87927780337564 1.0530768878578094 1.0568170800003505 0.0 0.058846181752535656 4084.3289937784552 3977230.2655765023 0.007205661665219152 0.027907433831591028 2.8286057488316013e-06 5.548427580305034 0.0037401921425410656 APGIIPR ddPTM_A549_PD325901_60min_R1 1 APGIIPR 7 0 P25705-2;P25705;P25705-3;K7EK77;K7EJP1;K7ERX7;K7ENJ4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 76.347 0.049085000000000004 4651100.0 1370.1 1285.2 1171.6 1551.2 1592.0 1419.5 1334.3 1517.5 1532.2 1419.3 1544.9 False True 1509.1915433856893 1393.5083144097919 1251.1118214031314 1647.0141009691947 1480.1834121018464 1407.9400626337244 1385.0775166569751 1487.2322720442803 1467.806962369028 1329.6851557807474 1354.8870939279852 1.113887312196883 1.0285051209468967 0.9234067008314351 1.2156098529171881 1.0924773132280798 1.0391567451955956 1.022282611491607 1.0976798573913713 1.0833426408348714 0.9813992337367579 1.0 10.40395691792613 -10.811416789838683 1.0156765413151068 0.9992990552621089 1.0675690053940947 0.15611793517049655 0.06844773632672406 0.9787935044254753 1.7631613330282527 0.04862968426305691 0.01160836004637273 1.543772179388881e-11 10.811416789838683 0.06826995013198578 APGLGVLS(ph)PSGEER ddPTM_A549_MK2206_60min_R1 1 APGLGVLSPSGEER 14 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form 1 APGLGVLS(0.961)PS(0.039)GEER 89.507 7.2392e-05 14239000.0 2026.2 2322.8 1657.4 1852.6 2499.3 1761.6 1729.6 1678.8 2856.6 2956.8 3003.1 True False 2368.173024166132 2441.0205985190355 1892.444242137021 2306.487083166373 2131.656280802691 1948.0113427445576 2043.8459316949677 1916.7750411093746 2209.5846610528347 2288.856826413214 2257.3473886564598 1.049095516297841 1.0813668338269793 0.8383486970799724 1.0217687781494547 0.9443191116771007 0.8629648021982056 0.905419317365873 0.8491271882836833 0.9788412152052269 1.0139586126243105 1.0 11.14041274011092 -5.693388312825656 24.999998936388874 0.9578082742559687 1.06523253710842 0.3246615967673193 0.06605180835771643 53.518742463503386 19659.724154153297 0.00944369053859 0.03657525244365594 2.0258705313891145e-06 5.693388312825656 0.10742426285245121 APGPS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 APGPSPAK 8 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 APGPS(1)PAK 61.161 0.010962999999999999 5577900.0 2986.7 2873.4 2845.6 2713.7 3363.0 2529.0 2619.7 2588.0 3122.7 3174.4 3621.5 True False 3289.9075853076674 3115.551502198176 3038.719527982886 2881.3190857401364 3126.794481720169 2508.404662487278 2719.3941170548437 2536.3803097532764 2991.4637784817673 2973.9678422535076 3176.0784585799715 1.0358395197764065 0.9809428648658581 0.9567520348163884 0.9071939258793933 0.9844827583756111 0.7897804462956463 0.8562112531283903 0.7985886818700616 0.9418733880457268 0.9363647280877224 1.0 11.633030836439602 -5.430766301112877 1.6298226540354332 0.9355488263426004 1.0527643813143777 0.17480221273071928 0.06998941694433676 1.2367548974640805 3.9848014885394467 0.011716437583071842 0.20486695134726576 3.7088024304666517e-06 5.430766301112877 0.11721555497177727 APGPS(ph)PAKEK ddPTM_A549_MK2206_60min_R1 3 APGPSPAKEK 10 1 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 APGPS(1)PAKEK;APGPS(1)PAKEK;APGPS(1)PAKEK 62.042 0.0020144000000000004 123454000.0 10537.05 12163.67 12125.09 10785.269999999999 13759.74 10398.13 11681.600000000002 10955.179999999998 15899.84 17480.2 17791.9 True False 12315.446433861283 12782.74884776478 13844.6100856119 13427.661634169162 11735.700473417366 11498.453214879928 13803.99551092041 12508.110313831663 12298.551626827099 13531.41067947385 13373.680198540464 0.9208719104263708 0.955813856619648 1.0352131859054645 1.0040363934853616 0.8775221404425494 0.8597822771427428 1.032176282518473 0.9352781080556073 0.9196086226265004 1.0117940969569919 1.0 13.707108903588798 -6.754657579004504 0.0034990442350323983 1.899162561356755 1.2095181555109107e-07 0.042480626208035055 0.05730110431997463 96409.42666472364 86.177340476284 23037.791966392077 23738.067957526007 1.7593102015073233e-07 6.754657579004504 -1.8991624404049396 APGS(ph)PAAPR ddPTM_A549_MK2206_60min_R1 2 APGSPAAPR 9 0 Q5SPY9;Q9NQX5 Q5SPY9 NPDC1 Neural proliferation differentiation and control protein 1 1 APGS(1)PAAPR;APGS(1)PAAPR 121.8 0.00012177 78015000.0 7818.0 7539.0 6542.1 6386.5 8218.0 7014.8 7553.6 6147.5 9817.900000000001 9871.400000000001 10533.099999999999 True False 9137.487268251314 7922.702898327449 7469.868152820443 7951.1927867008835 7009.14308631877 7757.101479952617 8925.991344617898 7018.926950929169 7594.161325964651 7641.443884014951 7917.440571228853 1.1540960978546506 1.0006646500281566 0.943470062783314 1.0042630210063948 0.8852789008343503 0.9797486208031809 1.1273834346233065 0.8865146366156775 0.9591687184316906 0.9651406682840357 1.0 12.950818418002992 -5.272841690267348 3.7996253312935386 0.9769886743762743 1.1700790956823193 0.4126799362820994 0.06187759622259386 0.17418979684008962 4.852728724659074 0.007924000400080134 0.09205723537438443 5.335293430313311e-06 5.272841690267348 0.19309042130604492 APGS(ph)PAAPR ddPTM_A549_PD325901_60min_R1 1 APGSPAAPR 9 0 Q5SPY9;Q9NQX5 Q5SPY9 NPDC1 Neural proliferation differentiation and control protein 1 1 APGS(1)PAAPR 94.40899999999999 0.00094895 53697000.0 7438.7 6742.6 6783.4 7384.3 8084.1 8083.5 7312.2 7717.4 8692.8 7112.8 8281.8 True False 8193.871347918486 7310.822565156762 7243.76231589792 7840.411440037916 7516.300704630983 8017.670656075883 7590.4697723893705 7563.470402816817 8327.471846026294 6663.696594121962 7263.191102655697 1.128136549363612 1.0065579249985104 0.9973250343432829 1.0794720019374355 1.0348482641304508 1.1038771447366047 1.0450599006838754 1.0413426131733374 1.1465307367420714 0.9174612783746614 1.0 12.82638782413447 APGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 APGSPR 6 0 Q9H6F5;Q9BXP2 Q9H6F5;Q9BXP2 CCDC86;SLC12A9 Coiled-coil domain-containing protein 86;Solute carrier family 12 member 9 1 APGS(1)PR 64.757 0.058204 256460000.0 5173.6 3757.4 3252.8 2261.8 2218.4 1118.6 976.96 1468.3 1532.4 5464.0 6200.4 True False 6046.77719762407 3948.635610847006 3714.095951987029 2815.941101536061 1892.0762986967104 1236.9695095334148 1154.4609860249284 1676.436021480162 1185.3138467399576 4229.67860508719 4660.669557665582 1.2974052596538845 0.8472249667116033 0.7969017983431829 0.6041923948254548 0.40596662674459294 0.2654059667240136 0.24770281860599666 0.3596985370316296 0.25432265301675944 0.9075259579668065 1.0 12.186321513819399 -2.9207011185922176 12.199991843502383 0.6114536839399258 0.9652007442448668 0.0 0.34170698441398345 0.0 0.0 0.05072972523047123 0.0 0.0012003250825368718 2.9207011185922176 0.35374706030494096 APGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 APGSPR 6 0 Q9H6F5;Q9BXP2 Q9H6F5;Q9BXP2 CCDC86;SLC12A9 Coiled-coil domain-containing protein 86;Solute carrier family 12 member 9 1 APGS(1)PR;APGS(1)PR 68.915 0.052791 815590000.0 10716.099999999999 11025.900000000001 8854.3 8160.2 10441.5 7938.7 6031.299999999999 7647.6 9262.9 10437.4 12546.2 True False 11803.990583224133 11955.091288399411 9455.206043231257 8664.237020841165 9708.125061219487 7874.049859267598 6260.824421953995 7495.062618573858 8873.612525602439 9778.380782742179 11003.096936914548 1.0727880205819735 1.086520582063673 0.8593222524023909 0.7874362164140637 0.8823084188824576 0.7156212386760643 0.5690056588476838 0.6811775504247806 0.8064649958533173 0.8886935050018927 1.0 13.425622022089923 -5.775322802324355 6.570567487378876 0.8436530472275555 1.08105251664798 0.4238213247871343 0.11715425798822862 0.13547034087141147 24.30821708456788 0.02053620591141071 0.06981004685015088 1.6775566605993478e-06 5.775322802324355 0.23739946942042456 APGT(ph)PHS(ph)HTKPYVR ddPTM_A549_PD325901_60min_R1 2 APGTPHSHTKPYVR 14 1 F8VUA6;F8VYV2;H0YHA7;J3QQ67;Q07020-2;Q07020 F8VUA6 RPL18 60S ribosomal protein L18 2 APGT(1)PHS(0.933)HT(0.067)KPYVR;APGT(1)PHS(0.96)HT(0.04)KPYVR 80.60300000000001 0.0023420000000000003 16045200.0 4336.8 4169.6 4123.3 4408.7 4379.9 4194.6 3716.2 4526.8 4359.7 4970.799999999999 5402.200000000001 True False 4777.06874341658 4520.986825212474 4403.131933417146 4681.015386115836 4072.270933834718 4160.4405683152 3857.622024582666 4436.509422794101 4176.476970265142 4656.942839677965 4737.763647367311 1.008296128505927 0.9542449057636516 0.9293692681068811 0.988022141779274 0.859534421075987 0.8781443900493181 0.8142284655179615 0.9364142563885365 0.8815291941770743 0.9829411482495002 1.0 12.20999051336343 -4.955017189832936 1.088301726067969 0.9249227403470118 1.1003494939826008 0.1860918072211042 0.05523638571751848 4.980462694728359 3.013391437946444 0.009485995001865881 1.1749572778941784 1.1091309138240135e-05 4.955017189832936 0.17542675363558902 APGT(ph)PHSHTKPYVR ddPTM_A549_MK2206_60min_R1 2 APGTPHSHTKPYVR 14 1 F8VUA6;F8VYV2;H0YHA7;J3QQ67;Q07020-2;Q07020 F8VUA6 RPL18 60S ribosomal protein L18 1 APGT(0.977)PHS(0.023)HTKPYVR;APGT(1)PHSHTKPYVR 122.93 1.6908000000000002e-06 8539300.0 510.40999999999997 666.68 620.88 650.5699999999999 774.47 552.23 589.71 474.42 847.8199999999999 977.3100000000001 979.73 True False 596.5547296735937 700.6111643794857 708.9301201025909 809.9596792051972 660.5464889342052 610.6666120593939 696.8526736701201 541.6704878503155 655.7901236903358 756.5349922287263 736.4360018275756 0.8100564450857295 0.9513537668457472 0.9626500039966476 1.0998371578727297 0.8969502947913474 0.8292188466396723 0.9462501452139445 0.7355296135795635 0.8904916680646994 1.0272922431158606 1.0 9.5244163465936 -5.256219987918457 23.731460474108413 0.9338227442198865 0.8100563357979147 0.12753696238242163 0.09316107882043595 451.40745817101725 2052310.7552888405 0.01273142633296195 0.1453494291878028 5.543448434911173e-06 5.256219987918457 -0.12376640842197184 APGT(ph)PHSHTKPYVR ddPTM_A549_PD325901_60min_R1 3 APGTPHSHTKPYVR 14 1 F8VUA6;F8VYV2;H0YHA7;J3QQ67;Q07020-2;Q07020 F8VUA6 RPL18 60S ribosomal protein L18 1 APGT(0.989)PHS(0.009)HT(0.001)KPYVR;APGT(1)PHSHTKPYVR;APGT(1)PHSHTKPYVR 91.65700000000001 7.599e-05 8922000.0 2722.56 2247.76 2016.1299999999999 2270.1200000000003 2837.42 2399.7400000000002 2871.5499999999997 2968.93 2921.9 2559.03 3050.67 True False 2998.9522869572584 2437.186623714407 2152.9567057745767 2410.3401565834106 2638.1294077676002 2380.1973130712613 2980.8284066224533 2909.7123620694724 2799.102704180958 2397.452409073208 2675.4569297904636 1.1209121902000232 0.9109422007796187 0.8047061725427185 0.9009078523167194 0.9860481693398866 0.8896414240754283 1.1141380649532286 1.0875571681497243 1.0462148252187256 0.8960908256000113 1.0 11.385569588903977 -7.7475897979674535 24.9996947810333 1.03464795275064 0.9291853796241778 0.2097633560302692 0.08935842956439696 232.96178404951345 420515.0496893885 0.012217273901789717 0.018069925864012893 1.7881757543194208e-08 7.7475897979674535 -0.10546257312646223 APGYPSS(ph)PVTTASGTTLR ddPTM_A549_MK2206_60min_R1 2 APGYPSSPVTTASGTTLR 18 0 Q9HCK8;H0YJG4;Q9HCK8-2;H0YJA4 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 APGYPS(0.002)S(0.998)PVTTASGTTLR;APGYPS(0.024)S(0.976)PVTTASGTTLR 212.95 1.65e-55 56082000.0 9529.5 9606.5 8368.8 6807.1 12018.8 8311.9 8436.7 9249.599999999999 13194.8 12489.7 13636.2 True False 11137.84662609375 10095.429817320957 9555.621680702487 8474.839805582333 10250.850441208082 9191.45974100732 9969.539183586341 10560.759125711977 10206.198867765854 9668.26809552663 10249.955200025712 1.086623932372486 0.9849242870149942 0.9322598483824122 0.8268172533633195 1.0000873409849018 0.8967316989818905 0.972642220286127 1.030322466744585 0.9957310708772904 0.9432497905456579 1.0 13.32332998363705 -8.003414908758652 24.957273264873262 1.0004069386159054 0.9498248223041078 0.06323577819875814 0.06389940071508925 220.9857149279473 1615052.163380463 0.009455444008807889 0.012927136522178306 9.92167715442151e-09 8.003414908758652 -0.05058211631179754 APGYPSS(ph)PVTTASGTTLR ddPTM_A549_PD325901_60min_R1 4 APGYPSSPVTTASGTTLR 18 0 Q9HCK8;H0YJG4;Q9HCK8-2;H0YJA4 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 APGYPS(0.04)S(0.956)PVT(0.004)T(0.001)ASGTTLR;APGYPS(0.029)S(0.971)PVTTASGTTLR;APGYPS(0.11)S(0.89)PVTTASGTTLR;APGYPS(0.028)S(0.972)PVTTASGTTLR 241.87 1.4206999999999996e-74 92521300.0 17608.5 17815.4 16888.7 17716.3 20279.8 16806.4 17326.7 17120.5 18411.5 19254.8 21311.0 True False 19396.101957307423 19316.766281151733 18034.8687420033 18810.595614363407 18855.41680951195 16669.534250544162 17986.077050034048 16779.018196727568 17637.728682715944 18039.048641955284 18689.882101559506 1.037786212449622 1.03354136618871 0.9649535852608963 1.006458762668911 1.0088569155788645 0.891901519761499 0.9623429913735662 0.8977594457552788 0.9437046519006255 0.9651772303288143 1.0 14.189969847935254 -5.71066598192737 0.8837205571703256 0.9626877515009058 1.0591003614307262 0.38465288786340623 0.03688795713062394 1.257430198986568 1.0895102716963216 0.006424085570909308 0.10008966005672545 1.946856843365708e-06 5.71066598192737 0.09641260992982037 APHKEST(ph)LPR ddPTM_A549_MK2206_60min_R1 1 APHKESTLPR 10 1 J3QTA6;Q9BRQ6;J3QTB2 J3QTA6 CHCHD6 MICOS complex subunit MIC25 1 APHKES(0.216)T(0.784)LPR 42.031000000000006 0.046333 2342000.0 793.01 667.26 737.24 685.07 702.74 588.68 705.72 636.45 1166.4 1095.8 1055.2 True False 926.8507007669444 701.220683902106 841.7917177947977 852.9121807539613 599.3678769140488 650.9737268658415 833.9401890123565 726.6687365463795 902.2122623580568 848.2580189338473 793.1647179615384 1.1685475661965699 0.8840795209654158 1.0613075679390183 1.0753279381185488 0.7556663368164505 0.8207295560736327 1.0514085789842147 0.9161637174355713 1.1374841088201384 1.0694601004365154 1.0 9.631476693924927 -8.752080350355563 24.94284589999623 1.0649230535871639 0.9616070619857828 0.1282291738031589 0.11816617985843958 293.1911389790705 781386.1287582418 0.020599454919636113 0.023202518110825597 1.769781494502455e-09 8.752080350355563 -0.10331599160138105 APIDTS(ph)DVEEK ddPTM_A549_MK2206_60min_R1 2 APIDTSDVEEK 11 0 D6RIY6;Q06265-3;Q06265-4;Q06265;Q06265-2 D6RIY6 EXOSC9 Exosome complex component RRP45 1 APIDT(0.289)S(0.711)DVEEK;APIDT(0.238)S(0.762)DVEEK 204.85 1.9423e-24 35412000.0 5961.0 6825.2 6577.700000000001 5918.0 13962.8 11885.0 8777.2 10262.6 14495.599999999999 8666.4 8380.099999999999 True False 6967.071067542347 7172.57352721376 7510.5167681336325 7367.910265669116 11908.890616409311 13142.662811375498 10371.90362608295 11717.354977894376 11212.369744716603 6708.654220923801 6299.08989100596 1.1060440774928695 1.138668228477734 1.192317763056118 1.1696785397822709 1.8905732133483604 2.086438364713767 1.646571775534158 1.8601663384141867 1.7799983709910188 1.0650196039435205 1.0 12.620927683976015 -6.574025792367326 24.905879925883163 1.5211974596011657 1.1509788652834785 0.30057205399959364 0.3215243351890379 141.17214051721058 68742.78231525811 0.05781487155565686 0.12035126845666572 2.6667002868338495e-07 6.574025792367326 -0.3702185943176872 APIDTS(ph)DVEEK ddPTM_A549_PD325901_60min_R1 2 APIDTSDVEEK 11 0 D6RIY6;Q06265-3;Q06265-4;Q06265;Q06265-2 D6RIY6 EXOSC9 Exosome complex component RRP45 1 APIDT(0.255)S(0.745)DVEEK;APIDT(0.405)S(0.595)DVEEK 168.76 5.3098e-15 47110000.0 5812.6 6300.1 6678.200000000001 6138.1 6129.9 6498.5 5771.6 5887.3 6031.5 7414.6 7517.7 True False 6402.690872990043 6831.031537202875 7131.422811278928 6517.236496363471 5699.356971006977 6445.57837057081 5991.241396340705 5769.873183002496 5778.017030106245 6946.44089061645 6593.070558626716 0.971124276019226 1.0360925878860494 1.0816542531837163 0.9884979143497835 0.8644465306911727 0.977629211344793 0.9087179248372299 0.8751420346097911 0.8763772477068349 1.053597231949439 1.0 12.686734805736112 -6.528217093812587 24.62910982374624 0.9308709419556184 1.0310715146530152 0.32048609137821205 0.05968297542988275 92.52174940614083 426859.56725899765 0.008222803566202178 0.017161958592901563 2.9633497089329496e-07 6.528217093812587 0.1002005726973968 APIIAVTR ddPTM_A549_MK2206_60min_R1 4 APIIAVTR 8 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 129.68 0.0029595 32447200.0 9449.900000000001 9189.900000000001 8996.49 9205.84 12500.3 8996.01 9463.14 9029.9 13242.4 12763.4 13967.2 False True 11044.812092126895 9657.626656763423 10272.32756120628 11461.271213265867 10661.522429047285 9947.961807131851 11182.47004513177 10309.915977908951 10243.017543767437 9880.139075433717 10498.758764890448 1.0520112271807347 0.9198827092837005 0.9784325739113665 1.0916786898270505 1.0155031340181988 0.9475369450719687 1.0651230584064626 0.982012846355417 0.9756408136571104 0.9410768736276239 1.0 13.357931152241918 APIIAVTR ddPTM_A549_PD325901_60min_R1 2 APIIAVTR 8 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 113.5 0.0037559 62005000.0 3970.2 3933.8999999999996 3711.8 3564.6 4148.3 4033.1 3905.8 3965.2 4080.0 4660.1 4702.8 False True 4373.251781293233 4265.423559023251 3963.705068866631 3784.777246206026 3856.9377188580966 4000.2557707700407 4054.4373563357685 3886.1109753607784 3908.531788582193 4365.860490702362 4124.3854135054235 1.060340230806968 1.034196160488783 0.961041384708461 0.9176584792033886 0.9351545338678676 0.9699034812971367 0.9830403684048034 0.9422278923389632 0.9476640509355863 1.0585481357795081 1.0 12.009963439912278 -5.675935826594656 4.108386181360891 0.9655118617710795 1.0540588050471613 0.41880817635741485 0.03614107705362883 0.11709905536679505 3.612787425713042 0.003982645178531522 0.017153665230805856 2.1089397538166447e-06 5.675935826594656 0.08854694327608181 APIRPDIVNFVHTNLR ddPTM_A549_MK2206_60min_R1 2 APIRPDIVNFVHTNLR 16 1 P36578;H3BTP7;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 ; 70.197 0.0052517 8565500.0 495.31000000000006 618.96 556.39 612.9300000000001 616.85 559.09 547.77 601.09 784.26 783.5 762.3100000000001 False True 578.9062188331493 650.4624202080855 635.2944683737283 763.0978775154734 526.112182136254 618.2525327060939 647.2927185502732 686.2963482609208 606.6263622058722 606.5068058356175 573.0073883143106 1.0102945104009777 1.1351728328 1.1087020539868702 1.3317417769435338 0.9181595087002032 1.0789608394490109 1.12964113858025 1.1977094227002674 1.0586711001937739 1.0584624530232611 1.0 9.16240993087854 -9.188056404019466 2.2709878189895205 1.0203767035904934 1.1143370680906524 0.09357098181297085 0.0994210904191677 0.37534693757163884 4.006243204867506 0.019146765128262723 0.0179519020332545 6.485501975860839e-10 9.188056404019466 0.09396036450015899 APIRPDIVNFVHTNLR ddPTM_A549_PD325901_60min_R1 2 APIRPDIVNFVHTNLR 16 1 P36578;H3BTP7;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 ; 79.317 0.0011970999999999998 12017500.0 1093.01 1158.63 861.2 1037.94 1081.11 941.39 1079.88 1078.7 1068.71 1123.97 1295.22 False True 1203.9715705685655 1256.2718163123388 919.6462108162997 1102.0511964672285 1005.1765632270263 933.7236319568594 1120.9754243330096 1057.1844822762212 1023.7958352391355 1053.0023423820794 1135.9161510760603 1.0599123618658262 1.105954709000541 0.809607478461428 0.9701871000101977 0.8849038393149147 0.8220004892723265 0.9868469809775157 0.9306888376177624 0.9012952534122237 0.9270071046921587 1.0 10.149640629283422 -5.732705231110286 24.99998815643513 0.9338440821349493 1.0829337238239813 0.5118263369042987 0.061067562925608665 146.4330799936987 127401.19516968055 0.008849794969187174 0.03426290628461399 1.8505241999547962e-06 5.732705231110286 0.14908964168903205 APIRPDIVNFVHTNLRK ddPTM_A549_MK2206_60min_R1 1 APIRPDIVNFVHTNLRK 17 2 P36578;H3BTP7;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 48.053000000000004 0.006840100000000001 945290.0 113.84 130.52 0.0 191.82 274.13 207.78 147.35 114.26 240.43 295.65 81.99700000000001 False True 133.05340887921847 137.1629105040057 0.0 238.81590861112696 233.80584013781518 229.76714168679857 174.12158767070625 130.4567049065745 185.9729888878152 228.8624596621575 61.63488189792672 2.158735520894932 2.2254104539562625 0.0 3.874687535000538 3.793401284114085 3.7278751027269754 2.825049425081536 2.116605092593887 3.0173334183685845 3.7131970179025524 1.0 5.9456751616874035 -6.264244691319834 24.998477647502966 2.406924751017736 1.537784920938443 0.1473744274008627 1.1021567326965387 494.63141095755907 4407743.065888494 0.17725302538867782 0.4296647979332363 5.441959541585767e-07 6.264244691319834 -0.869139830079293 APIRPDIVNFVHTNLRK ddPTM_A549_PD325901_60min_R1 1 APIRPDIVNFVHTNLRK 17 2 P36578;H3BTP7;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 56.407 0.0028024 2536100.0 295.77 243.12 220.76 291.52 243.63 360.42 361.01 363.58 279.66 137.87 402.91 False True 325.7963526656339 263.60857562971427 235.74210113772205 309.52652831004343 226.51826927787226 357.4848590168702 374.7484331022521 356.32811167700766 267.9068627438469 129.16486467095862 353.3546242569259 0.9220095912166293 0.7460170535027247 0.667154424916519 0.8759656929945402 0.6410508133414712 1.0116886393340114 1.0605448673278735 1.008415023367346 0.7581812840492232 0.36553891134884997 1.0 8.464972979062836 -7.269241284840696 24.910357252049042 0.9157951774320884 0.7692072154130227 0.025884757465666652 0.1989891712547382 655.1539965588594 2091810.6113802486 0.019429285082180236 0.031398237459071436 5.3797081425272166e-08 7.269241284840696 -0.14658796201906565 APKDS(ph)EEIDDVTR ddPTM_A549_MK2206_60min_R1 2 APKDSEEIDDVTR 13 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 APKDS(1)EEIDDVTR;APKDS(1)EEIDDVTR 90.714 5.1308000000000004e-05 8723500.0 3376.2 3209.3 2828.6000000000004 2805.3 3960.1 2931.8 2767.2 2873.6 3881.3 3998.8 4010.3 True False 3946.020019835007 3372.6396619713873 3229.7380133394354 3492.5986259347033 3377.57453591275 3242.041130028667 3269.9644207830215 3280.941600030915 3002.1917471624893 3095.4683027127844 3014.431831350605 1.3090427120612667 1.1188309607453584 1.0714251288583172 1.15862584438337 1.120468043359083 1.0755065337059164 1.0847697356347004 1.08841127734539 0.9959395053950741 1.0268828342772214 1.0 11.557670389163185 -2.000000000032656 0.18996082658055402 0.9763295591718169 2.1436865701954098 0.665261562908045 0.04797647498895341 19.791551618831917 0.21415173711676216 0.04383127975530808 6.853796586223671 0.009999999999248065 2.000000000032656 1.167357011023593 APKPPTDGST(ph)SPTSTPSEDQEALGK ddPTM_A549_PD325901_60min_R1 1 APKPPTDGSTSPTSTPSEDQEALGK 25 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;Q8NHM5-5 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 APKPPTDGS(0.09)T(0.453)S(0.453)PT(0.002)S(0.001)TPSEDQEALGK 128.3 6.8054e-24 26280000.0 2444.3 2467.2 2586.0 2664.6 2630.6 2550.6 2960.1 2483.7 2472.5 3695.3 3093.5 True False 2692.4435366014445 2675.119602639152 2761.501510881272 2829.18629025433 2445.8357310773326 2529.828759248734 3072.7482253288713 2434.1606550750425 2368.58942335036 3461.9781273561557 2713.019111312203 0.9924159860780314 0.9860305043502918 1.0178702757260045 1.0428184152694524 0.9015180618813842 0.932477308656014 1.1325936527747784 0.8972147099611526 0.8730456094003506 1.2760610910999828 1.0 11.405683495089912 APKPPTDGSTS(ph)PTSTPSEDQEALGK ddPTM_A549_MK2206_60min_R1 2 APKPPTDGSTSPTSTPSEDQEALGK 25 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;Q8NHM5-5 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 APKPPT(0.009)DGS(0.087)T(0.387)S(0.505)PT(0.005)S(0.007)TPSEDQEALGK;APKPPT(0.008)DGS(0.059)T(0.175)S(0.307)PT(0.175)S(0.216)T(0.049)PS(0.009)EDQEALGK 92.822 5.111100000000001e-09 19194300.0 2050.3 1837.99 2009.6999999999998 1352.4299999999998 2795.2 2181.02 1754.94 2032.9 2893.2 2807.7 3106.7 True False 2396.3405149777013 1931.5358403099717 2294.7056796324187 1683.7754107128899 2384.0297827790487 2411.814088756095 2073.7898816886955 2321.069800495144 2237.8948194910226 2173.4386199676633 2335.220649441918 1.026173058015049 0.8271320488586718 0.9826504746696284 0.7210348243174736 1.0209012939949789 1.0327992300566893 0.888048794097594 0.9939402518772025 0.9583226407431116 0.9307208809099397 1.0 11.189343157858712 APKPPTDGSTSPTS(ph)TPSEDQEALGK ddPTM_A549_PD325901_60min_R1 1 APKPPTDGSTSPTSTPSEDQEALGK 25 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;Q8NHM5-5 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 APKPPTDGS(0.017)T(0.148)S(0.148)PT(0.263)S(0.353)T(0.07)PSEDQEALGK 139.16 5.4528e-25 30501000.0 2852.8 2853.4 2677.0 3438.4 3357.6 2862.6 2597.7 3532.5 3565.7 3275.4 3577.3 True False 3142.4141558796387 3093.8660320081704 2858.6773181087233 3650.7821588270203 3121.7737590911775 2839.2879346920045 2696.5568950159845 3462.04151630736 3415.8460290557646 3068.5906850167394 3137.3147783730874 1.0016253955585532 0.9861509764131962 0.9111860046096947 1.1636646038814762 0.9950463946464534 0.9050057565993966 0.859511105995661 1.1035046722671116 1.0887801417322602 0.9780946133202527 1.0 11.615314572024936 -8.312367232305608 24.999942529313753 1.047713901892076 0.9779851179964629 0.14002881934560252 0.08041949870657589 537.8467343709525 264021.93483683385 0.013544508668476818 0.016374525205436495 4.87116418236915e-09 8.312367232305608 -0.0697287838956131 APKS(ph)PAK ddPTM_A549_MK2206_60min_R1 3 APKSPAK 7 1 P10412 P10412 HIST1H1E Histone H1.4 1 APKS(1)PAK;APKS(1)PAK;APKS(1)PAK 46.891000000000005 0.016956 79739000.0 22992.4 18065.8 14184.8 9528.5 11587.5 10419.5 9281.8 10117.3 12201.8 24361.3 26440.6 True False 26872.955009790414 18985.272054729292 16196.417935239064 11862.982927750625 9882.994099868434 11522.084574095667 10968.182914434752 11551.458257931788 9438.11178227069 18858.065410342355 19874.669296563538 1.3521208634368034 0.9552497086334901 0.8149276696664096 0.5968895759086574 0.49726583886239906 0.5797371720840614 0.5518674424600979 0.5812151178751493 0.4748814504250695 0.9488492678267124 1.0 14.278643234503567 -5.353238035357251 1.5614078666174094 0.6832173313617538 1.5243790496892746 0.6077897666990446 0.1656635428675349 0.6102496178219278 1.5739412163382123 0.030837119639224864 0.7386066628169156 4.433655701330893e-06 5.353238035357251 0.8411617183275208 APKS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 APKSPAK 7 1 P10412 P10412 HIST1H1E Histone H1.4 1 APKS(1)PAK 45.161 0.020499 146070000.0 3741.6 3365.4 3169.0 2936.5 2949.6 2278.9 2379.4 2702.7 3150.0 3655.5 3841.2 True False 4121.444477579659 3649.0140688723295 3384.067396745067 3117.8809357246255 2742.4302715675917 2260.3413939668867 2469.9493690576387 2648.7925282728656 3017.6164544200738 3424.6911061484684 3368.75675137302 1.2234319013683201 1.0831931000613457 1.0045448948980382 0.925528664084712 0.814077855413528 0.6709719818878667 0.7331931484963852 0.7862819205314497 0.8957656123999365 1.0166038568242277 1.0 11.71800054385565 -5.679169211109396 1.4462186247964228 0.8915136880467768 1.2363216598039335 0.5484176815153246 0.10491285822872035 0.46482756520054697 1.4364572512390201 0.018259775595101894 0.18435262105448247 2.0932967004482886e-06 5.679169211109396 0.3448079717571567 APLATGEDDDDEVPDLVENFDEAS(ph)KNEAN ddPTM_A549_PD325901_60min_R1 2 APLATGEDDDDEVPDLVENFDEASKNEAN 29 1 P20290;P20290-2 P20290 BTF3 Transcription factor BTF3 1 APLATGEDDDDEVPDLVENFDEAS(1)KNEAN;APLATGEDDDDEVPDLVENFDEAS(1)KNEAN 109.56 2.2008e-15 16781600.0 1314.3400000000001 871.94 1532.1100000000001 1307.05 1292.3 1539.6399999999999 979.56 1900.03 1112.5 1336.21 1761.19 True False 1447.7708292340321 945.4214438736966 1636.0881979258718 1387.7835099740748 1201.5333061929746 1527.1016823060154 1016.8376918357991 1862.1324111053 1065.745493822962 1251.8414725609741 1544.5747951032606 0.9373264628063824 0.6120917205634523 1.0592482818654911 0.8984890303621045 0.7779055504480427 0.9886874285061236 0.6583285542787973 1.2055954926940327 0.6899928039753576 0.8104764343751212 1.0 10.59299401895678 -8.914234871836962 0.009667031989607378 1.7376331173543234 2.2931688808477962e-06 0.0 0.17633052655526174 5113.569501602176 36.216275922670846 3274.801274446997 3231.4194398862014 1.2183305324775264e-09 8.914234871836962 -1.7376308241854426 APLDPELHQES(ph)DMEFNNTTQEDVQER ddPTM_A549_MK2206_60min_R1 2 APLDPELHQESDMEFNNTTQEDVQER 26 0 Q14789;Q14789-2;E7EU81 Q14789 GOLGB1 Golgin subfamily B member 1 1 APLDPELHQES(0.998)DMEFNNT(0.001)TQEDVQER;APLDPELHQES(1)DMEFNNTTQEDVQER 88.66799999999999 4.6388e-09 7917100.0 1436.6799999999998 1646.69 1246.67 1168.85 1876.33 1711.1 1841.35 1400.12 2677.6000000000004 1834.5500000000002 2374.4 True False 1679.1564605463411 1730.499487418336 1423.4665520362987 1455.2183024716696 1600.3243425593205 1892.1674662637447 2175.899460179539 1598.5912976876698 2071.1278752485705 1420.1238808496894 1784.7709498937422 0.9408246255052005 0.9695919173949815 0.7975625959852417 0.8153529743176889 0.8966553061918657 1.0601738370833504 1.2191477345084998 0.8956842881059013 1.1604446359752083 0.7956897107352837 1.0 10.801523221294186 -7.255852928807606 5.054369178840209 1.0738579202138185 0.8789165675995262 0.17767270727718776 0.12284884956376245 0.12218945934286002 9.848227003287976 0.014246153858259525 0.024102286366831656 5.54813565397668e-08 7.255852928807606 -0.19494135261429235 APLDPELHQES(ph)DMEFNNTTQEDVQER ddPTM_A549_PD325901_60min_R1 1 APLDPELHQESDMEFNNTTQEDVQER 26 0 Q14789;Q14789-2;E7EU81 Q14789 GOLGB1 Golgin subfamily B member 1 1 APLDPELHQES(1)DMEFNNTTQEDVQER 90.633 3.8506e-09 5742100.0 1066.1 1205.7 1113.3 1507.5 1661.9 1467.8 972.78 1428.6 1325.2 1450.2 1954.5 True False 1174.3296871786608 1307.3085704045186 1188.8552328167507 1600.6148512190955 1545.173877243754 1455.8467234475397 1009.799675225641 1400.105452284981 1269.5064525071375 1358.6341245073195 1714.1088905963147 0.6850963165882231 0.7626753338580048 0.6935704256239896 0.9337883141497877 0.9014444098158837 0.8493315281394234 0.5891105756264677 0.8168124323758124 0.7406218236610942 0.7926183289526428 1.0 10.743243045765565 -10.756182492331861 0.9058969261763027 1.006080699918664 0.7766144901463745 0.041951327127900506 0.11229021881466446 0.49042762304825266 0.6839506719307721 0.07656834674536393 0.017574752572295873 1.7531436688447346e-11 10.756182492331861 -0.2294662097722895 APLKDEQEMRAS(ph)PK ddPTM_A549_MK2206_60min_R1 2 APLKDEQEMRASPK 14 2 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 APLKDEQEMRAS(1)PK;APLKDEQEMRAS(1)PK 51.818999999999996 0.0047396999999999995 19973700.0 4383.2 4896.4 4841.9 4459.0 6236.700000000001 5075.6 5029.1 4381.9 7491.299999999999 7685.1 8375.2 True False 5122.977001048752 5145.605845784658 5528.554227104648 5551.455200172114 5319.289691706532 5612.6966230894 5942.822372275186 5003.047744005941 5794.5325111479015 5949.030572466247 6295.406696239083 0.8137642646835274 0.8173587655359386 0.8781885736480602 0.8818263009899884 0.8449477449779869 0.8915542543808109 0.9439934001127309 0.7947139851973017 0.9204381528852763 0.9449795477105929 1.0 12.620083866688127 -14.999999999998991 0.08661457795728944 1.4783524566630808 0.7419842344994817 0.49336408436223655 0.04348860686871699 58.37376122350577 0.37064801028236555 5.130355823738941 0.4428088941850183 1.0000000000023233e-15 14.999999999998991 -0.7363682221635991 APLKDEQEMRAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 APLKDEQEMRASPK 14 2 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 APLKDEQEMRAS(1)PK;APLKDEQEMRAS(1)PK 83.41799999999999 6.4145e-05 30658000.0 4748.1 5219.0 5387.200000000001 5091.700000000001 6272.3 6854.799999999999 6182.0 6572.700000000001 7518.299999999999 6509.200000000001 6766.9 True False 5230.123616633526 5658.823446082096 5752.807787865268 5406.202744910293 5831.755286260304 6798.976781501691 6417.2593929202 6441.602342316601 7202.3319965925175 6098.208001132976 5934.614198913385 0.8812912585945604 0.9535284445479564 0.9693650833981079 0.9109611111536379 0.9826679697777299 1.1456476450898139 1.08132713902366 1.0854289978101768 1.2136141887557323 1.0275660382859504 1.0 12.534938529962172 -7.1012649017759 4.2564643244638765 1.1028980721192683 0.9344251306116549 0.6408060105884709 0.05748239810393149 0.14676614763492496 4.580014123045526 0.011598151960919073 0.020703395128646947 7.920180846513251e-08 7.1012649017759 -0.16847294150761338 APLKPYPVS(ph)PSDKVLIQEK ddPTM_A549_MK2206_60min_R1 1 APLKPYPVSPSDKVLIQEK 19 2 J3KR24;A0A0A0MSX9;P41252;Q5TCC6 J3KR24 IARS Isoleucine--tRNA ligase, cytoplasmic 1 APLKPYPVS(0.5)PS(0.5)DKVLIQEK 109.08 1.8213e-10 20184000.0 1949.1 2216.7 2431.9 2469.8 2778.0 2369.2 1923.4 1616.9 3398.3 3675.9 3159.2 True False 2278.060429080153 2329.520561708777 2776.77998820624 3074.9011108735344 2369.3598799943466 2619.9071714523207 2272.8568831071343 1846.1005265485767 2628.59047596998 2845.511636976575 2374.6834505156294 0.9593111993876505 0.9809815119581325 1.1693263738387114 1.2948677897282952 0.9977581978262716 1.1032658567117417 0.9571199406024475 0.7774091010520673 1.1069224722980313 1.19826987313139 1.0 11.213519497133731 -7.72985057688687 24.91553617503408 1.0205818081410565 1.0890666878403266 0.07346232289477095 0.1308938564905401 468.01005824022633 369139.9506838847 0.019666029033806997 0.029167982800509265 1.8627279155336973e-08 7.72985057688687 0.06848487969927008 APLKPYPVS(ph)PSDKVLIQEK ddPTM_A549_PD325901_60min_R1 1 APLKPYPVSPSDKVLIQEK 19 2 J3KR24;A0A0A0MSX9;P41252;Q5TCC6 J3KR24 IARS Isoleucine--tRNA ligase, cytoplasmic 1 APLKPYPVS(0.788)PS(0.212)DKVLIQEK 113.6 2.6827e-12 50524000.0 3600.6 2737.7 3943.2 3967.7 4482.7 4499.0 4196.2 4478.8 3933.9 4792.4 3991.4 True False 3966.1302613783764 2968.4155869589836 4210.809264387868 4212.775817699504 4167.850616475464 4462.361635638695 4355.8886872487465 4389.466820449368 3768.5718635057556 4489.8070461238985 3500.4831035692655 1.1330236838836085 0.8480016898045417 1.202922322377251 1.2034841172076933 1.1906501169012123 1.2747845093406251 1.2443678653404346 1.2539602936445118 1.0765862173890037 1.2826249729775496 1.0 11.773338327584469 -9.028061468829984 3.3697455144392854 1.0304486643562203 1.1673360458121698 0.0 0.13386935903251987 0.25975132318822214 6.1197830654244045 0.021903136999775266 0.02198615120700626 9.374293164042583e-10 9.028061468829984 0.13688738145594948 APLKPYPVSPS(ph)DKVLIQEK ddPTM_A549_MK2206_60min_R1 1 APLKPYPVSPSDKVLIQEK 19 2 J3KR24;A0A0A0MSX9;P41252;Q5TCC6 J3KR24 IARS Isoleucine--tRNA ligase, cytoplasmic 1 APLKPYPVS(0.425)PS(0.575)DKVLIQEK 107.74 2.3501e-10 17880000.0 1557.2 1649.2 1790.0 1895.6 1920.3 1396.7 1649.7 1220.6 2416.8 2847.6 2199.1 True False 1820.01729011524 1733.1372356972583 2043.848916028277 2360.0220850967175 1637.826413806029 1544.497866945576 1949.4291359373185 1393.6237879307266 1869.3986588365497 2204.325182255909 1653.0027779276145 1.1010370426582181 1.0484781143986395 1.2364461471690145 1.4277181603139832 0.9908189119073276 0.9343589058464427 1.1793259890230412 0.8430861741671881 1.1309107787345842 1.3335278147684015 1.0 10.690873433792632 APLKPYPVSPS(ph)DKVLIQEK ddPTM_A549_PD325901_60min_R1 1 APLKPYPVSPSDKVLIQEK 19 2 J3KR24;A0A0A0MSX9;P41252;Q5TCC6 J3KR24 IARS Isoleucine--tRNA ligase, cytoplasmic 1 APLKPYPVS(0.425)PS(0.575)DKVLIQEK 113.54 5.3649e-12 45050000.0 3323.7 3053.0 4209.0 3781.8 4185.4 4426.9 3864.3 4072.8 4004.2 3908.9 3899.2 True False 3661.1195772213823 3310.28702450443 4494.648050773111 4015.3931969090377 3891.4319428461476 4390.848794134018 4011.3580511260984 3991.564808950209 3835.91739898059 3662.091386902951 3419.62311906531 1.0706207818076983 0.9680268582957864 1.3143694185813197 1.1742209761427072 1.1379710007077615 1.2840154137612025 1.1730409789200769 1.1672528433604779 1.12173688895549 1.0709049680024139 1.0 11.739621617312253 -9.955586973921468 0.7573877491148683 1.0087696829712243 1.1629113792235555 0.20624491502731457 0.09027829406589119 0.557012620478629 0.6501670666536644 0.041868009710182175 0.018992707200292433 1.1076767144438956e-10 9.955586973921468 0.1541416962523312 APLPLGHIK ddPTM_A549_PD325901_60min_R1 1 APLPLGHIK 9 0 P09960-4;P09960 P09960-4 LTA4H Leukotriene A-4 hydrolase 0 72.485 0.002826 1989800.0 441.69 599.03 692.58 532.88 699.88 756.63 537.98 611.39 677.96 749.63 755.51 False True 486.5300436450076 649.5123603959677 739.5826436218679 565.7947873417123 650.7228432549248 750.4682561398768 558.453123293952 599.1953468238236 649.4676988694077 702.298233867344 662.5870595724854 0.7342884781947396 0.9802671981174009 1.1162044789994263 0.8539176537899407 0.9820941019807787 1.1326334332941759 0.8428373528065539 0.9043269683087933 0.9801997933501109 1.059933519257803 1.0 9.371966217412025 -5.261983931302381 8.481392339538067 0.9830555288982307 0.7328002856865127 0.3917008620474719 0.08987170739157854 0.060948286995918144 68.53082057007597 0.010984249413939873 0.08835781432967382 5.470362026093693e-06 5.261983931302381 -0.250255243211718 APLS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 APLSPGR 7 0 A0A1B0GW05 A0A1B0GW05 1 APLS(1)PGR;APLS(1)PGR 86.833 0.012987 153393000.0 2669.7 2903.8 2240.03 2525.1800000000003 3198.4 2149.6000000000004 2412.7 2622.3999999999996 3332.2 3671.3 4045.0 True False 3120.280092101628 3051.591016867389 2557.699937078673 3143.849213359637 2727.919596894861 2377.0692452110034 2851.0563595053477 2994.13323076318 2577.462020429969 2841.9507801714135 3040.514863679323 1.0262341188905688 1.0036428544784888 0.8412061942639556 1.0339858064549203 0.8971900218220967 0.7817982650262446 0.937688676862868 0.984745467463357 0.8477057787874077 0.9346939277028802 1.0 11.570099926878084 -5.575235104167214 13.030893131872348 0.9220656443488335 1.0205925190919072 0.21919769863760208 0.07091957554354493 1.1841164059336742 293.3030269018049 0.010598819777814255 0.04107343782928834 2.659285073138323e-06 5.575235104167214 0.09852687474307364 APLS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 APLSPGR 7 0 A0A1B0GW05 A0A1B0GW05 1 APLS(1)PGR;APLS(1)PGR 82.75 0.014821 170199000.0 5776.9 5688.5 5439.3 5311.1 6222.799999999999 5863.3 5536.6 6042.700000000001 5920.5 5966.9 7128.5 True False 6363.3666352709915 6167.889858792487 5808.443607168017 5639.154584616742 5785.731995494578 5815.551228770922 5747.298342743772 5922.173608093554 5671.681974093349 5590.148915682477 6251.739691284643 1.0178553409928381 0.9865877601063511 0.9290923637248345 0.9020136574909081 0.9254595170621527 0.9302292667236611 0.9193118438305905 0.947284100192059 0.9072165915673145 0.8941749323753084 1.0 12.610041993596099 -10.979854237363783 1.249647500666873 1.0000134339061402 0.9360754341554192 0.0 0.04511234693196138 0.4565908293608364 1.2679218946392954 0.02479623837816695 0.005699333442775977 1.0474800557050165e-11 10.979854237363783 -0.06393799975072101 APLS(ph)PGRK ddPTM_A549_MK2206_60min_R1 3 APLSPGRK 8 1 A0A1B0GW05 A0A1B0GW05 1 APLS(1)PGRK;APLS(1)PGRK;APLS(1)PGRK 61.161 0.0088117 196863000.0 7136.6 7931.9 7291.799999999999 6237.299999999999 9231.6 7505.5 7336.3 7204.3 10634.699999999999 9958.4 10597.1 True False 8341.083606881855 8335.599830115867 8325.886885974856 7765.438780003041 7873.643869026577 8299.727028252315 8669.210747394653 8225.531587243433 8225.957430126227 7708.790523590826 7965.547604918708 1.0471450326567948 1.0464565957736105 1.0452372264819105 0.974878208650451 0.98846234553474 1.041953101018096 1.088338326173763 1.0326385573496775 1.0326920179407022 0.9677665498892586 1.0 12.959557830310237 -10.491986226748233 0.9156024012438422 1.0008900359686417 1.03242436187245 0.2419814288091624 0.030519688708467847 0.9192017778871276 1.4355627117015695 0.017868181441456063 0.005724854570380986 3.2211709461501605e-11 10.491986226748233 0.031534325903808336 APLS(ph)PGRK ddPTM_A549_PD325901_60min_R1 3 APLSPGRK 8 1 A0A1B0GW05 A0A1B0GW05 1 APLS(1)PGRK;APLS(1)PGRK;APLS(1)PGRK 74.464 0.0020998 554705600.0 6906.9 6481.999999999999 6950.6 6207.1 7280.2 6599.799999999999 7061.599999999999 7363.7 6751.3 6535.4 7949.799999999999 True False 7608.083403408954 7028.260888580973 7422.3095133532 6590.498469653097 6768.863867326543 6546.053416956712 7330.333052255791 7216.825226789098 6467.5663392781735 6122.753728661655 6972.0249979343 1.0912300810256859 1.0080659335936597 1.0645844665720952 0.9452775157297567 0.9708605275127455 0.9389027461743472 1.0513922503759887 1.0351117830081402 0.9276453169910336 0.878188722856807 1.0 12.767362026863951 -6.255123754588664 24.834930470008853 0.9735449549119463 1.0499707415689916 0.3675282333500275 0.04993484734400663 384.4885654450809 1511918.7686086276 0.006229528200569733 0.016059966250671458 5.557458718783799e-07 6.255123754588664 0.07642578665704536 APLS(ph)PSLNSRPSPISATPPALVPETR ddPTM_A549_MK2206_60min_R1 1 APLSPSLNSRPSPISATPPALVPETR 26 1 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 APLS(0.59)PS(0.378)LNS(0.031)RPS(0.001)PISATPPALVPETR 64.152 0.00011032 11156000.0 1006.5 1341.3 809.21 951.3 1394.4 860.15 1017.7 951.37 1596.5 1830.5 1416.0 True False 1176.372593437573 1409.56644084449 923.9681459995772 1184.3685427054795 1189.2856071505112 951.1705020786395 1202.6029166778267 1086.2296109484316 1234.8952990866235 1416.9887786625375 1064.3681203881142 1.105230954313642 1.324322303387386 0.8680907745176161 1.1127433451065858 1.117363047962059 0.8936480563996994 1.1298749874613927 1.0205394075053147 1.1602144741391989 1.331295772129893 1.0 10.055781489643742 -5.74095401289431 24.999939899079383 1.0597467713650877 1.2147765195562523 0.14940325871030813 0.1308389731163236 247.32836827144902 301829.8708441744 0.013613307465669492 0.05260394773110052 1.8157079164965034e-06 5.74095401289431 0.15502974819116466 APLS(ph)PSLNSRPSPISATPPALVPETR ddPTM_A549_PD325901_60min_R1 1 APLSPSLNSRPSPISATPPALVPETR 26 1 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 APLS(0.45)PS(0.45)LNS(0.043)RPS(0.019)PIS(0.019)AT(0.019)PPALVPETR 42.708999999999996 0.017202000000000002 15632000.0 1588.4 1414.7 1199.2 1346.6 1775.5 1537.4 1469.3 1750.1 1493.4 1547.5 1760.3 True False 1749.6531986817217 1533.9217338900824 1280.5849233754143 1429.776423649507 1650.7950051424782 1524.8799241233462 1525.2150155318109 1715.1928825731088 1430.6375914383932 1449.7905859019982 1543.794259461087 1.133346097097483 0.9936050250799281 0.8295049133182069 0.926144410038562 1.0693102367920084 0.987748150233216 0.9879652072707138 1.1110242650933644 0.9267022355283308 0.9391086778675392 1.0 10.592264782972167 -5.279200444047556 4.987336834762242 0.973218015075541 1.13942943305792 0.2861335401794556 0.07115706013882722 0.14849548009931218 10.838348460860614 0.009736727071588293 0.08110685940175894 5.257745446744065e-06 5.279200444047556 0.16621141798237904 APLSPSLNSRPS(ph)PISATPPALVPETR ddPTM_A549_PD325901_60min_R1 1 APLSPSLNSRPSPISATPPALVPETR 26 1 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 APLS(0.002)PS(0.104)LNS(0.098)RPS(0.694)PIS(0.098)AT(0.002)PPALVPETR 64.39 0.00010753 2786400.0 962.16 1061.2 1097.0 1572.1 1450.5 1534.4 1441.8 1404.1 1525.3 1516.7 1162.6 True False 1059.8377748952441 1150.6310482817246 1171.449016796889 1669.2050465018508 1348.6218839533462 1521.9043551286993 1496.6684879832324 1376.094124004859 1461.196945373632 1420.9353031583587 1019.6075703286143 1.0394565573435903 1.1285038300675643 1.1489214584973482 1.6371053874814547 1.3226872016247313 1.4926373630574332 1.4678867944270595 1.3496311365767428 1.4330973875593094 1.393609997128992 1.0 9.993798274820799 -10.82166087348145 1.0393602935417097 0.9977065970538829 1.346500305055758 0.0 0.20277072711739413 0.4901105833259886 0.9297029455295881 0.12603084831825348 0.030353779083682475 1.5077839863801327e-11 10.82166087348145 0.34879370800187515 APNPTAT(ph)SPPASAPR ddPTM_A549_MK2206_60min_R1 2 APNPTATSPPASAPR 15 0 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 APNPTAT(0.647)S(0.351)PPAS(0.001)APR;APNPTAT(0.751)S(0.248)PPAS(0.001)APR 130.72 2.7635e-09 11166300.0 3765.9 4622.7 4014.8 4290.5 5512.8 3804.1 3333.2 3611.8 6677.4 5779.799999999999 6116.299999999999 True False 4401.491852584754 4857.97568485188 4584.159010095157 5341.672692607866 4701.874422762 4206.647337042788 3938.799294360352 4123.7837106736 5164.979561616675 4474.139165754564 4597.4539087075045 0.9573759606917208 1.0566665335460899 0.9971082040459031 1.1618762903725524 1.0227126831781228 0.9149949995312547 0.8567349173202866 0.8969711915682763 1.1234434676624567 0.9731776010370904 1.0 12.166619395783817 APNPTAT(ph)SPPASAPR ddPTM_A549_PD325901_60min_R1 2 APNPTATSPPASAPR 15 0 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 APNPT(0.001)AT(0.776)S(0.223)PPASAPR;APNPT(0.001)AT(0.497)S(0.497)PPAS(0.005)APR 133.47 1.9905999999999997e-09 14617000.0 6254.1 6179.299999999999 6578.200000000001 6870.7 7780.2 7909.299999999999 6520.4 7379.0 7693.200000000001 7321.2 8599.9 True False 6889.011627974918 6700.051297255237 7024.636209930073 7295.087534508153 7233.745592232903 7844.889283120052 6768.53739009979 7231.820056286481 7369.881557823656 6858.938182556192 7542.1668192577345 0.9133995300110457 0.8883456780812262 0.931381707441656 0.9672402784676277 0.9591070796475455 1.040137333357486 0.8974261047657281 0.9588517768953569 0.977157060356425 0.9094121552765148 1.0 12.880763345331832 -2.0000000000006546 0.21982820144839682 0.9956373506182133 0.45461715821506543 0.08286261712969267 0.042549601971286044 32.04362646098693 0.3718982901218371 0.021233831320305256 6.23679625172905 0.009999999999984927 2.0000000000006546 -0.5410201924031479 APPAPLAASEVT(ph)NSNSAER ddPTM_A549_MK2206_60min_R1 1 APPAPLAASEVTNSNSAER 19 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 APPAPLAAS(0.075)EVT(0.396)NS(0.3)NS(0.229)AER 51.265 0.015652000000000003 3287800.0 839.26 1352.8 1307.8 1321.1 1562.6 1384.4 1084.0 1263.9 1993.7 1897.3 1830.7 True False 980.9065700630085 1421.651741724018 1493.2657052412194 1644.7695593064332 1332.7436099637032 1530.8962891096548 1280.948768476725 1443.0616955314147 1542.1301332846854 1468.6986122679227 1376.0866652503676 0.7128232507685414 1.0331120689010966 1.0851538227568915 1.1952514335332076 0.96850267037594 1.1124999084495313 0.9308634411072264 1.0486706484208692 1.1206635252178012 1.0673009552059756 1.0 10.426355617775956 -5.2628133702139 4.520072624207342 1.0575899642186988 0.6905192099215611 0.6653353179897079 0.07019606522788976 0.0887641053074685 4.6074163269690835 0.009777569618857599 0.10309481995960808 5.459924405421081e-06 5.2628133702139 -0.36707075429713765 APPAPLAASEVTNS(ph)NSAER ddPTM_A549_MK2206_60min_R1 1 APPAPLAASEVTNSNSAER 19 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 APPAPLAAS(0.014)EVT(0.191)NS(0.479)NS(0.316)AER 80.585 0.00025079 3344800.0 1311.6 1655.9 1863.5 1497.4 2294.8 1196.2 1111.7 1552.5 2560.9 2228.7 2454.5 True False 1532.9660144587388 1740.1782370792453 2127.772321239495 1864.2630672208397 1957.2379599031794 1322.7810900267039 1313.6814999221178 1772.5716293318474 1980.8602389169644 1725.2351221006254 1844.9799092462056 0.8308849363487406 0.9431963071024558 1.1532766891260233 1.010451689949574 1.0608451344615664 0.7169623275557218 0.712030246691869 0.9607538924670774 1.073648677142655 0.9350969695954555 1.0 10.849389390926794 -8.560116678267756 8.730305840547626 1.0339925782635082 0.9229553210552338 0.06123078809414806 0.13074652885465143 0.4527137808090254 97.55255462390572 0.023293403362701658 0.026457381598056485 2.7534888471277057e-09 8.560116678267756 -0.1110372572082744 APPAPLAASEVTNSNS(ph)AER ddPTM_A549_PD325901_60min_R1 1 APPAPLAASEVTNSNSAER 19 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 APPAPLAASEVT(0.001)NS(0.043)NS(0.956)AER 191.07 6.6698e-44 7315000.0 2650.3 2373.9 2370.5 2594.5 2516.5 2935.7 2619.6 3355.8 3181.3 2999.6 3315.8 True False 2919.3565049522613 2573.9568842027743 2531.3763849744983 2754.75637246298 2339.749721453704 2911.7926325282333 2719.290311500122 3288.8659364258283 3047.6010242687553 2810.204744085063 2907.977620588009 1.003912988973399 0.8851364143862656 0.8704937641379236 0.9473100318791151 0.8045968802815593 1.0013119124140484 0.9351139060520921 1.1309804838734632 1.0480139196024878 0.9663777066884113 1.0 11.50580045117168 -7.74273625842977 2.0635479502621936 1.0301009468356324 0.9044533178821151 0.3985067595345422 0.06642968974510911 0.20893605688691136 1.824622908920369 0.009770670206022316 0.014916423785528005 1.8082719334103094e-08 7.74273625842977 -0.12564762895351722 APPGLTPAPAS(ph)PPVLPR ddPTM_A549_MK2206_60min_R1 1 APPGLTPAPASPPVLPR 17 0 C9J069 C9J069 C9orf172 Uncharacterized protein C9orf172 1 APPGLT(0.015)PAPAS(0.985)PPVLPR 81.44800000000001 0.00022916 2135000.0 950.64 1107.2 1190.7 938.18 1566.0 1318.0 1125.9 965.4 1723.0 1567.5 1746.5 True False 1111.0847910834525 1163.551750766435 1359.5591644217147 1168.0341421165008 1335.6434744676562 1457.4698851824066 1330.4614561143403 1102.2484064135044 1332.7432510656138 1213.4006613239699 1312.7958490521478 0.8463500184630133 0.886315836241051 1.0356211633387862 0.889730221922802 1.0174037916344758 1.1102029963262872 1.0134564769342829 0.839619052124014 1.015194595586106 0.9242873994460431 1.0 10.35842686695561 -5.646057759929297 4.978241380363769 0.9976026796824998 0.8560293186152037 0.2657707473236939 0.0722009118786827 0.15701262956828316 6.01323017263786 0.009212924559121814 0.03811554414622634 2.2591352916798607e-06 5.646057759929297 -0.14157336106729612 APPPPAAGS(ph)RR ddPTM_A549_PD325901_60min_R1 2 APPPPAAGSRR 11 1 C9JI98 C9JI98 TMEM238 Transmembrane protein 238 1 APPPPAAGS(1)RR;APPPPAAGS(1)RR 55.724 0.0069007999999999995 36661000.0 8291.8 8798.9 8455.900000000001 8050.1 10780.0 8885.599999999999 9147.4 8972.3 9590.0 10581.400000000001 11186.2 True False 9133.57743189946 9540.414182742239 9029.768223457439 8547.336393896408 10022.849988981086 8813.238619611288 9495.50931264934 8793.34043786681 9186.965650123333 9913.28859816698 9810.368315164234 0.9310126937621054 0.9724827729449548 0.9204311126117258 0.8712554023771449 1.021658888534125 0.8983596065387629 0.9679054860735242 0.8963313257336761 0.9364547135220922 1.010490970338357 1.0 13.260091585886023 -10.507048808853908 0.8155850874032861 1.0003003309210927 0.9354335125849714 0.3092490318091262 0.039808087094069765 0.6388379735427198 0.7610163999825719 0.024771101833215944 0.007002203790932281 3.111366641726148e-11 10.507048808853908 -0.06486681833612129 APPPPIS(ph)PTQLSDVSSPR ddPTM_A549_PD325901_60min_R1 2 APPPPISPTQLSDVSSPR 18 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 APPPPIS(0.973)PT(0.025)QLS(0.002)DVSSPR;APPPPIS(0.957)PT(0.041)QLS(0.003)DVSSPR 78.244 0.00037016 6540900.0 4130.2 4671.1 4178.0 4285.0 4939.0 4200.7 4978.7 5740.9 4477.2 4488.700000000001 5166.5 True False 4549.494863507459 5064.749990226876 4461.544204354967 4549.674718058918 4592.10167862501 4166.490891937647 5168.167152949179 5626.393245851076 4289.0388538824 4205.282715953667 4531.053253141908 1.0040700493539252 1.1177864631617151 0.9846594059033092 1.004109743116371 1.0134733409810999 0.9195413647033464 1.1406105521636687 1.2417407016679052 0.9465876065147345 0.9281026907016938 1.0 12.145630731503736 APPPSRPPPRPS(ph)V ddPTM_A549_MK2206_60min_R1 3 APPPSRPPPRPSV 13 2 Q9H6X2 Q9H6X2 ANTXR1 Anthrax toxin receptor 1 1 APPPS(0.022)RPPPRPS(0.978)V;APPPS(0.003)RPPPRPS(0.997)V;APPPS(0.002)RPPPRPS(0.998)V 46.156000000000006 0.013188 78679000.0 8037.7 7907.6 7714.6 6371.0 8740.5 6728.2 6713.8 5989.23 9655.4 10783.6 12405.3 True False 9394.267257102025 8310.063063909556 8808.646283570808 7931.895286005057 7454.784028470338 7440.173658182301 7933.610555165164 6838.2216937476205 7468.467316505472 8347.577270464539 9324.721641137488 1.007458197535648 0.8911861805341614 0.9446551460271015 0.8506307846244163 0.7994645111530596 0.7978976686401871 0.8508147331889011 0.7333432521545438 0.8009319316897509 0.8952092718390517 1.0 13.186844943762456 -4.762187661908814 1.1171765508394473 0.8716638299827737 1.2483394848742528 0.25511292076026293 0.07212267960939514 6.979359311669019 3.2480873957781946 0.014313966946233313 4.051765498285863 1.7290690540385824e-05 4.762187661908814 0.37667565489147914 APPPSRPPPRPS(ph)V ddPTM_A549_PD325901_60min_R1 2 APPPSRPPPRPSV 13 2 Q9H6X2 Q9H6X2 ANTXR1 Anthrax toxin receptor 1 1 APPPSRPPPRPS(1)V;APPPSRPPPRPS(1)V 99.711 5.1337e-05 94537000.0 4587.200000000001 4467.8 4698.8 4893.0 5386.8 5333.1 4679.4 5359.0 5745.9 6006.9 7589.8 True False 5052.88916708184 4844.317185745463 5017.688824179783 5195.229497190737 5008.449751451143 5289.669001783667 4857.477127665931 5252.110540945831 5504.419804905492 5627.623308856034 6656.302715706273 0.7591134873056473 0.7277789777070636 0.7538252147607407 0.7804977806871711 0.7524371960477637 0.7946857629089067 0.7297560425255575 0.7890432219305326 0.8269485388513375 0.8454578388655675 1.0 12.700505330598627 -10.097675951210437 0.4379742434735433 1.0295838362422618 0.7472899209812571 0.5545986995887608 0.04903779822694096 0.1960561809836347 0.06754294482220732 0.02359983727175743 0.006491719552154014 7.985903331267752e-11 10.097675951210437 -0.28229391526100467 APPS(ph)PGSLAAPGR ddPTM_A549_MK2206_60min_R1 2 APPSPGSLAAPGR 13 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APPS(0.998)PGS(0.002)LAAPGR;APPS(0.981)PGS(0.019)LAAPGR 119.21 1.2478e-05 41175000.0 6044.1 7792.6 5756.9 5809.6 7192.700000000001 5850.299999999999 5390.5 5946.1 10800.0 8951.6 10475.5 True False 7064.196315942414 8189.210055114278 6573.314985856532 7232.952260802857 6134.663358112076 6469.374862885154 6369.8840742378125 6788.977884167533 8353.817244056083 6929.427342843799 7874.144240907977 0.8971382920879581 1.0400127054530524 0.834797380483159 0.9185699473507253 0.7790895328334346 0.8215972002741928 0.8089620763034553 0.8621861216228733 1.0609174773121497 0.8800229118033985 1.0 12.94290742511645 -8.756005447132416 24.985094822040182 1.0287665895758986 0.8696696053290447 0.21281635682641054 0.08069111587648599 77.33272588527896 355573.648601287 0.012113573534382825 0.013543387224226894 1.753858503958248e-09 8.756005447132416 -0.15909698424685392 APPS(ph)PGSLAAPGR ddPTM_A549_PD325901_60min_R1 2 APPSPGSLAAPGR 13 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APPS(0.987)PGS(0.013)LAAPGR;APPS(0.994)PGS(0.006)LAAPGR 134.04 2.7581e-08 65752000.0 10798.2 20446.8 10270.9 11947.9 11649.3 11814.8 10408.4 11554.2 18383.300000000003 10985.6 20494.6 True False 11894.425314785307 22169.92359405084 10967.945037939078 12685.894647350324 10831.093355903286 11718.584185984459 10804.497357695018 11323.742416905445 17610.713830647794 10291.967341185775 17973.894125973526 0.6617611760379203 1.2334513288366242 0.6102152911922206 0.7057955587386222 0.602601377308193 0.651978035691792 0.6011216758021162 0.6300105217901473 0.9797940116493224 0.5726064295835128 1.0 14.13361538870894 -8.77507721399136 23.62316341599599 0.9904583673933441 0.7165322876318474 0.0 0.21199955338427515 96.99643705670107 168014.33967452124 0.02964581014039467 0.0316574608208412 1.6785055670905735e-09 8.77507721399136 -0.27392607976149674 APPTLQAETATKPQATSAPS(ph)PAPK ddPTM_A549_MK2206_60min_R1 2 APPTLQAETATKPQATSAPSPAPK 24 1 A8CG34;A8CG34-2;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 1 APPTLQAETATKPQAT(0.023)S(0.063)APS(0.914)PAPK;APPTLQAETATKPQAT(0.016)S(0.052)APS(0.932)PAPK 99.98700000000001 1.9251e-09 27307000.0 3159.6 3707.8 3515.5 3073.7 4464.5 3410.0 2759.1000000000004 3469.2 3881.7000000000003 4861.0 4758.1 True False 3692.8632351965784 3896.5111827057326 4014.050762177325 3826.7566379836376 3807.7779640873887 3770.843936625196 3260.3927556311214 3960.9697239794145 3002.501147801155 3762.8967238888786 3576.532453120544 1.0325261363068396 1.089466189327041 1.1223303059014729 1.0699627888584575 1.0646563435388603 1.0543295737006704 0.9116072056850515 1.1074888249716417 0.8395006020933647 1.052107529628518 1.0 11.804345817126704 -7.794749379776182 1.1031768614994755 0.9315944932975465 1.0833825081222226 0.1286743079669429 0.07611514244412894 0.3398933146872311 0.8352315405290807 0.013840131026362399 0.022720959786409624 1.604170849551705e-08 7.794749379776182 0.15178801482467608 APPTLQAETATKPQATSAPS(ph)PAPK ddPTM_A549_PD325901_60min_R1 2 APPTLQAETATKPQATSAPSPAPK 24 1 A8CG34;A8CG34-2;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 1 APPTLQAETATKPQAT(0.002)S(0.009)APS(0.989)PAPK;APPTLQAETATKPQATS(0.001)APS(0.999)PAPK 150.98 9.1069e-29 39826000.0 5624.4 4930.3 6745.2 5653.9 6861.0 6253.700000000001 5947.200000000001 6650.2 6009.200000000001 5445.799999999999 6066.1 True False 6195.384947535555 5345.793683889353 7202.969834182654 6003.128562061451 6379.107029165056 6202.771940607627 6173.523950432709 6517.55654401902 5756.654221555906 5101.951258613959 5320.0081561761635 1.1645442573886167 1.0048468962746333 1.3539396224083795 1.1284058944707127 1.1990784303139368 1.1659327877921832 1.160435053706764 1.2251027353130248 1.0820762022465749 0.9590119241999553 1.0 12.377212742205447 -9.210207284828497 1.2857541756981485 1.0224450280916968 1.1740451910223946 0.4317608016831672 0.08240714368935842 0.26920939240073355 0.9227231254474552 0.017440728570579177 0.015383259475440563 6.163007768645668e-10 9.210207284828497 0.15160016293069778 APQAGAHTPLTPQPGLAPQQQS(ph)PK ddPTM_A549_PD325901_60min_R1 1 APQAGAHTPLTPQPGLAPQQQSPK 24 0 O15063 O15063 KIAA0355 Uncharacterized protein KIAA0355 1 APQAGAHTPLTPQPGLAPQQQS(1)PK 112.8 3.4925e-20 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 APQPTS(ph)PPASR ddPTM_A549_MK2206_60min_R1 2 APQPTSPPASR 11 0 E7ET89;Q86UW9 E7ET89 DTX2 Probable E3 ubiquitin-protein ligase DTX2 1 APQPT(0.022)S(0.978)PPASR;APQPT(0.017)S(0.978)PPAS(0.006)R 79.283 0.00097728 65574000.0 6551.4 7154.700000000001 6978.4 6430.3 8082.2 5848.6 5900.5 5249.9 8364.1 11285.2 10718.9 True False 7657.1161536481995 7518.843669805469 7968.0420534143805 8005.723788667138 6893.319086425598 6467.494970013522 6972.544472690886 5994.0894021444565 6469.644704723103 8735.865482088208 8057.10130340972 0.9503561970119144 0.9331946300121035 0.9889464899792622 0.9936233252124013 0.8555581997595567 0.8027074162858688 0.8653911884836479 0.7439511030608231 0.8029742287074367 1.084244215520939 1.0 12.976045179572736 -6.763503311630398 24.999836382316598 0.8782386433796968 0.9657502214937149 0.17721972569023914 0.09043242282558021 77.15331173254633 934555.1105391604 0.013319448646745564 0.02609228498467006 1.7238389461691316e-07 6.763503311630398 0.08751157811401811 APQPTS(ph)PPASR ddPTM_A549_PD325901_60min_R1 2 APQPTSPPASR 11 0 E7ET89;Q86UW9 E7ET89 DTX2 Probable E3 ubiquitin-protein ligase DTX2 1 APQPT(0.012)S(0.988)PPAS(0.001)R;APQPT(0.006)S(0.992)PPAS(0.002)R 77.597 0.0011274000000000002 85366000.0 12130.7 12826.3 12895.0 12320.7 16088.5 14566.7 13830.7 14764.1 14085.3 14533.5 17385.1 True False 13362.199733850654 13907.21731490376 13770.132243934251 13081.721656660098 14958.499262311898 14448.073624773999 14357.034856949433 14469.61844328761 13493.343823950181 13615.852329697382 15246.842913228957 0.8763912509557577 0.9121375089945429 0.9031464626677937 0.8579954375544667 0.9810883044733886 0.9476108402899656 0.9416398488957028 0.9490239078106468 0.8849926440996287 0.8930276521628985 1.0 13.896222921572091 APQS(ph)PR ddPTM_A549_MK2206_60min_R1 2 APQSPR 6 0 P12270 P12270 TPR Nucleoprotein TPR 1 APQS(1)PR;APQS(1)PR 72.968 0.047513 508460000.0 6739.299999999999 5984.6 4249.9 3267.7 2152.2 1601.68 2044.34 1927.01 1816.73 8360.3 9221.3 True False 7876.729079934264 6289.190577706657 4852.599725267361 4068.286646692625 1835.6142310021012 1771.168714490864 2415.7701156344183 2200.1695687206206 1405.2435557216672 6471.702423519478 6931.396715067032 1.1363841089649835 0.9073482353182313 0.7000897401701285 0.5869360554488593 0.2648260237380381 0.2555284003065081 0.34852573225006295 0.31742081129738703 0.2027359872025558 0.9336794140568667 1.0 12.7589303774094 -5.695265135619733 1.6086424319377428 0.5211243314703664 1.1518210211408941 0.40183385900292945 0.25495445924370824 0.5431697893858293 2.2406054295479154 0.0477986021187739 0.4134051266182606 2.0171345324675034e-06 5.695265135619733 0.6306966896705277 APQS(ph)PR ddPTM_A549_PD325901_60min_R1 4 APQSPR 6 0 P12270 P12270 TPR Nucleoprotein TPR 1 APQS(1)PR;APQS(1)PR;APQS(1)PR;APQS(1)PR 74.486 0.046353 926600000.0 13995.800000000001 13603.399999999998 11049.9 10446.4 10887.3 9794.7 6417.549999999999 9432.0 11159.4 14326.5 17059.0 True False 15416.64331283661 14749.806259136452 11799.812662446622 11091.650402504241 10122.613607146 9714.93521062244 6661.773377068103 9243.871360739138 10690.409225858848 13421.922345024219 14960.851145910741 1.0304656575004056 0.985893524057154 0.7887126572789859 0.7413783008953958 0.6766067992002461 0.6493571198506195 0.445280372894357 0.6178706860047712 0.7145588925119989 0.8971362801569509 1.0 13.86890463425722 -5.733175486640299 4.208434387907649 0.7786435577026725 1.019036921602775 0.31326021632702683 0.14549584458123588 0.26179405209409606 10.17341157339986 0.02613797655161438 0.10548625158012347 1.8485215305529636e-06 5.733175486640299 0.24039336390010257 APQT(ph)SS(ph)SPPPVR ddPTM_A549_MK2206_60min_R1 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 APQT(0.871)S(0.256)S(0.659)S(0.213)PPPVR 66.267 0.0082697 4163600.0 1210.6 1368.0 1379.8 1304.0 1797.8 1453.3 975.43 1151.1 1824.8 1952.1 2019.6 True False 1414.9196836716596 1437.6253567995689 1575.4763878971046 1623.480058538784 1533.3460015312596 1607.0872413775367 1152.6530048295692 1314.2719500959035 1411.4857136068088 1511.119254207669 1518.0775818755897 0.9320470182581327 0.9470038777750596 1.0378101927772352 1.0694315481116383 1.010057733437316 1.0586331427093307 0.7592846496062887 0.8657475518952835 0.9297849664988226 0.995416355691569 1.0 10.568029806724487 APQTLPS(ph)PEADALAGSK ddPTM_A549_PD325901_60min_R1 1 APQTLPSPEADALAGSK 17 0 P31274 P31274 HOXC9 Homeobox protein Hox-C9 1 APQT(0.005)LPS(0.995)PEADALAGSK 96.666 2.1926e-06 2501500.0 2543.9 2465.8 2604.1 2888.8 3321.4 3075.8 2922.5 3241.2 2958.3 2647.3 3099.8 True False 2802.154855279799 2673.601619725852 2780.8298857254135 3067.2346150591866 3088.116322207958 3050.7517045782397 3033.717336753364 3176.5517233277897 2833.9729387653683 2480.149026208955 2718.544251251195 1.0307556531368296 0.983468125815992 1.0229113925386912 1.1282636336147587 1.1359448428278 1.1222004950532434 1.1159345062553654 1.1684752682858848 1.0424597419964925 0.9123077636376454 1.0 11.408618596535847 -8.975292625627583 10.860981411472311 1.018679689120663 1.0888646228232186 0.32618400617607746 0.062121833387539696 0.4418454306003131 188.67193152382148 0.01055493149777174 0.010948735586728457 1.0585402452781956e-09 8.975292625627583 0.07018493370255552 APQTS(ph)S(ph)SPPPVR ddPTM_A549_PD325901_60min_R1 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 APQT(0.455)S(0.598)S(0.765)S(0.182)PPPVR 94.76700000000001 0.00030049 5401600.0 1983.4 1496.5 1759.0 1461.0 1471.5 1571.5 1229.7 1276.0 1511.7 1579.1 1535.2 True False 2184.753307898091 1622.6153069672073 1878.3763177262779 1551.2426518282564 1368.1469163994134 1558.7022250291652 1276.4969064176605 1250.5491789973646 1448.1685060783582 1479.3953565091088 1346.3801324346184 1.6226868291256407 1.2051687839697107 1.395130745378474 1.152158008320571 1.0161668933167 1.157698474212191 0.948095471454566 0.9288232564276141 1.0756015119293827 1.0987947020831055 1.0 10.394870077784292 -2.0000000000006257 0.4276622346511153 1.0184660561774506 12.23791539765647 0.7700310565095936 0.09422322546881963 21.74055030375882 0.24175806157315122 0.018344707390888733 212.09407709648107 0.009999999999985592 2.0000000000006257 11.21944934147902 APQTS(ph)SS(ph)PPPVR ddPTM_A549_PD325901_60min_R1 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 APQT(0.428)S(0.534)S(0.387)S(0.651)PPPVR 71.176 0.0030451999999999996 5593700.0 1409.3 1553.3 1478.2 1492.1 1788.3 1476.1 1661.0 1640.4 1584.6 1649.0 1906.0 True False 1552.3710985281743 1684.2020423068243 1578.5195411387058 1584.2636281950327 1662.6959773000822 1464.0791309993947 1724.2102639340762 1607.6809351310944 1518.0047725949355 1544.8818585799002 1671.5740831294831 0.9286881833091479 1.0075545315668566 0.9443311888297748 0.947767522949991 0.9946887751377554 0.8758685276206118 1.0314889907278586 0.9617766579158912 0.9081289234593548 0.9242078315114861 1.0 10.706991580386216 APQTS(ph)SSPPPVR ddPTM_A549_PD325901_60min_R1 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.07)S(0.569)S(0.181)S(0.181)PPPVR 142.29 1.0343e-11 434070000.0 21235.0 21187.0 20808.0 20342.0 23352.0 22734.0 22331.0 22547.0 23426.0 23687.0 23585.0 True False 23390.76156761922 22972.502845782965 22220.156008668775 21598.479139966053 21711.83608002658 22548.861841433685 23180.81842499208 22097.28239722069 22441.486686109405 22191.398777551298 20684.194517633197 1.1308519433850173 1.110630768154834 1.074257737700454 1.0442020897431337 1.0496824549545463 1.090149380591585 1.1207020126034166 1.0683172786053061 1.0849582113037142 1.0728674379189973 1.0 14.336241156893234 -10.669964130322523 0.6226207130694283 0.9896447040169479 1.0861801982965371 0.11757102560811739 0.03354616120754302 0.61282064746596 0.3539149664917512 0.03263909916000437 0.005875432892954305 2.1381386774646346e-11 10.669964130322523 0.09653549427958918 APQTSS(ph)S(ph)PPPVR ddPTM_A549_MK2206_60min_R1 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 APQT(0.097)S(0.497)S(0.593)S(0.812)PPPVR 79.492 0.001035 4718100.0 622.61 532.33 414.36 414.4 724.94 365.42 536.56 324.17 810.67 800.92 972.74 True False 727.6913466469625 559.4233232347332 473.1224786846244 515.9280186031228 618.3022863222109 404.08850185383574 634.0460066548633 370.1220902289889 627.0545393739764 619.9916157369018 731.1818117417617 0.995226269255133 0.7650946922518771 0.6470654371962434 0.7056083867487365 0.8456204413090385 0.5526511947708997 0.8671523230925159 0.5061970692997877 0.8575904505614795 0.8479308508235569 1.0 9.514086373359543 -9.306372381148375 1.7667329232427127 0.956523849230865 0.7350518941086576 0.19423133531337844 0.13993779077548368 0.24999583912367548 1.6069804708107214 0.02776843161332003 0.024480189870410732 4.938870272439249e-10 9.306372381148375 -0.2214719551222074 APQTSS(ph)SPPPVRR ddPTM_A549_PD325901_60min_R1 1 APQTSSSPPPVRR 13 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.029)S(0.108)S(0.432)S(0.432)PPPVRR 44.691 0.023978 9762600.0 3465.0 3407.5 3853.5 3501.1 3394.2 3450.8 3004.1 3432.9 3717.5 3985.4 5264.6 True False 3816.764249201818 3694.661983622291 4115.021682977949 3717.3549954249897 3155.8031013543227 3422.697828909093 3118.422669406595 3364.428116442047 3561.2664029544835 3733.761163847381 4617.087575049048 0.8266605705786882 0.8002148375067463 0.8912591793180867 0.8051298432184276 0.6835051425943114 0.7413110046700238 0.6754090362631833 0.7286905569267454 0.7713231220043844 0.808683201944186 1.0 12.172767381764709 -10.49098701682985 0.8321348879019097 0.9988980026696016 0.7683191858385064 0.17550693856806587 0.08083080381260639 0.3158816271881416 0.39638977370695627 0.043592284822121435 0.01279190783383545 3.228590638515867e-11 10.49098701682985 -0.23057881683109516 APQTSSS(ph)PPPVR ddPTM_A549_MK2206_60min_R1 4 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.041)S(0.327)S(0.107)S(0.524)PPPVR;APQTS(0.003)S(0.096)S(0.901)PPPVR;APQT(0.006)S(0.029)S(0.153)S(0.812)PPPVR;APQT(0.023)S(0.081)S(0.341)S(0.554)PPPVR 154.23 1.0515999999999999e-13 648181500.0 33020.700000000004 34417.06 34336.36 33510.5 46472.3 35127.729999999996 34732.54 34571.8 50315.700000000004 51279.1 53978.6 True False 38593.78688139503 36168.74134685101 39205.77215997582 41720.574004343536 39636.28623148355 38844.92307269999 41042.992932720124 39472.45852169709 38919.27428766227 39695.11569511834 40574.223886427884 0.9511897748044096 0.8914216436546428 0.9662728797898261 1.0282531619366133 0.9768834110648738 0.9573793248992657 1.0115533706227968 0.9728456823274114 0.9592117990131367 0.9783333331582564 1.0 15.3082758783668 -5.934542611233922 6.9957398612258155 0.9830844934800151 0.9222033450474878 0.5099988364622312 0.023984083151203702 0.13256268531791507 11.514041803136111 0.0033658176403636715 0.01059654618671264 1.1626724686441363e-06 5.934542611233922 -0.06088114843252734 APQTSSS(ph)PPPVR ddPTM_A549_PD325901_60min_R1 3 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.006)S(0.056)S(0.086)S(0.852)PPPVR;APQT(0.004)S(0.016)S(0.137)S(0.844)PPPVR;APQT(0.003)S(0.017)S(0.153)S(0.827)PPPVR 174.51 7.1503e-16 470156200.0 24832.699999999997 24888.15 26363.6 26157.199999999997 30483.2 26847.199999999997 25416.88 27284.4 28272.100000000002 27154.4 28721.6 True False 27353.697423132453 26985.561745470033 28152.792433205504 27772.870836688628 28342.165193331006 26628.565304360796 26384.13327705041 26740.191237802264 27083.921955876107 25439.866549801103 25189.0252812234 1.085937114189276 1.0713221906838064 1.1176610495599995 1.102578227089688 1.1251791157817466 1.0571494929663066 1.0474455832444567 1.0615810234521121 1.0752270742316186 1.009958355505113 1.0 14.62050767593075 -13.677777574460613 0.17624251082814862 0.7893183035541119 1.1060814040905174 0.6976671075736509 0.020896376972002768 13.961422741888518 0.23210063240446566 1.073938510273615 0.029471578029990536 2.100015138841165e-14 13.677777574460613 0.31676310053640544 APQTSSS(ph)PPPVRR ddPTM_A549_MK2206_60min_R1 4 APQTSSSPPPVRR 13 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.037)S(0.103)S(0.23)S(0.631)PPPVRR;APQT(0.007)S(0.028)S(0.123)S(0.842)PPPVRR;APQT(0.007)S(0.031)S(0.158)S(0.805)PPPVRR;APQT(0.001)S(0.004)S(0.344)S(0.65)PPPVRR 92.65 0.00014312 74144000.0 16251.400000000001 10299.6 7867.1 6051.4 8189.299999999999 6441.599999999999 6558.200000000001 6164.1 9636.6 15537.0 19342.0 True False 18994.23901141716 10823.805646851493 8982.773076696123 7533.993271657668 6984.664818300114 7123.245836411983 7749.740049284191 7037.880051764536 7453.925486488042 12027.180909084866 14538.847587956858 1.3064473574336726 0.7444747997645501 0.617846292311155 0.5181974173729142 0.4804139238715046 0.4899456984687334 0.5330367487794306 0.48407413374319364 0.5126902556336338 0.82724444536082 1.0 13.827625299080026 -5.265008519224309 3.6665988406402157 0.6685346246265981 1.3741730657814937 0.5740589362308286 0.1663384195550765 0.21448303297944432 5.291323074921695 0.03173767344902393 0.4092473851642714 5.432396750686694e-06 5.265008519224309 0.7056384411548956 APQTSSS(ph)PPPVRR ddPTM_A549_PD325901_60min_R1 2 APQTSSSPPPVRR 13 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.003)S(0.038)S(0.273)S(0.686)PPPVRR;APQTS(0.003)S(0.018)S(0.979)PPPVRR 108.38 5.9295e-05 91204000.0 5318.8 5517.3 5680.3 5824.0 6547.2 6803.1 6232.6 6201.3 6838.6 6299.5 7099.4 True False 5858.760660506387 5982.262233966033 6065.7993164187465 6183.735252736324 6087.347258613819 6747.697809160613 6469.785003609589 6077.610206674265 6551.1974238721 5901.748494920606 6226.2188068045425 0.9409821341491298 0.9608178606617722 0.9742348453590363 0.9931766686352576 0.9776956845719985 1.0837553286412218 1.0391194406047626 0.9761318057168397 1.0521951809198216 0.9478864585469873 1.0 12.604140562713152 -6.4828861234511646 1.2404004539418616 1.0252874153421938 0.9520553265473848 0.2590511693220897 0.03717462115445992 0.33403896866424765 0.9675578234084449 0.004795331746509174 0.017488712589846765 3.289378705140289e-07 6.4828861234511646 -0.07323208879480902 APRPFGS(ph)VSSPK ddPTM_A549_MK2206_60min_R1 2 APRPFGSVSSPK 12 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 APRPFGS(0.736)VS(0.248)S(0.016)PK;APRPFGS(0.993)VS(0.006)S(0.001)PK 56.513999999999996 0.0045162 8468900.0 5686.1 6256.9 5800.5 5640.1 7859.7 5844.9 5737.4 5440.6 9215.3 8530.4 8174.0 True False 6645.774668202074 6575.349484619317 6623.098121464821 7021.924753193714 6703.548541681631 6463.40343846939 6779.811313891483 6211.821711138715 7128.049263810185 6603.376715379903 6144.170209076588 1.0816390890969265 1.070176974411575 1.0779483471471425 1.1428597376453613 1.0910421283216878 1.0519570940468426 1.1034543450433523 1.0110106816315385 1.160132128709609 1.0747385717968787 1.0 12.585002467581404 -11.1131797155233 1.4655129907432358 1.0000872811202985 1.095812866569879 0.062223954680873494 0.04437806615197048 0.3287662567210654 1.2649564351513845 0.030423128048165538 0.006620675272628051 7.705845272754906e-12 11.1131797155233 0.09572558544958043 APRPFGS(ph)VSSPK ddPTM_A549_PD325901_60min_R1 1 APRPFGSVSSPK 12 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 APRPFGS(0.978)VS(0.017)S(0.005)PK 50.305 0.0081855 4276600.0 1282.4 1337.1 1696.0 1498.5 1594.2 1440.4 1771.5 1686.2 1863.8 1888.4 2331.8 True False 1412.5883039470164 1449.7821095528584 1811.100758876502 1591.0589416595787 1482.228891691434 1428.6698599630977 1838.9154019019954 1652.5674182016894 1785.470967539089 1769.1661017236406 2045.0033824980742 0.6907510843436694 0.7089387342635477 0.8856223781225004 0.7780226454765177 0.7248051051538199 0.698614912909291 0.8992236480585514 0.8081000903690415 0.8730894935528404 0.8651164672219346 1.0 10.99788751409276 -9.380248874851416 0.3157013230275216 1.0343193345734412 0.7295975164043822 0.42561662876349105 0.07293619902402515 0.6853142153101884 0.1768242362174201 0.07828182211384993 0.041084567431402035 4.1663056260315724e-10 9.380248874851416 -0.30472181816905897 APRPFGSVS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 APRPFGSVSSPK 12 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 APRPFGS(0.012)VS(0.567)S(0.42)PK 45.915 0.036286 4317200.0 1340.2 1834.5 1769.8 2069.0 2630.0 2044.6 2120.4 2349.0 2461.5 3132.9 2602.0 True False 1566.3929952558733 1927.8682142169669 2020.7842522831543 2575.905092880938 2243.1304839399318 2260.958214904362 2505.6492330978313 2681.9779435107953 1903.9741802077829 2425.1757141064522 1955.8515884533017 0.8008751811759836 0.9856924858708405 1.033199177388097 1.3170248234008277 1.1468817456204905 1.1559968191105647 1.2811039691816866 1.371258412112812 0.9734757951207618 1.239958966428682 1.0 10.933581186278541 APRPFGSVS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 APRPFGSVSSPK 12 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 APRPFGS(0.004)VS(0.647)S(0.349)PK 65.574 0.0048267 5188300.0 5992.2 5201.5 5781.1 5733.4 6078.1 6339.4 5716.4 6861.9 6110.6 6203.7 7236.0 True False 6600.523732775509 5639.848659665834 6173.440210578388 6087.539096503849 5651.195224306678 6287.774028221373 5933.9407301341025 6725.034021443588 5853.792732183905 5811.997323269931 6346.0178727832845 1.0401048129857537 0.8887224670220266 0.9728053614621786 0.9592691383067173 0.8905104488506796 0.9908219854199107 0.9350652407683103 1.059725036433607 0.922435588668852 0.9158495043318972 1.0 12.631635869097515 APRPFGSVSS(ph)PK ddPTM_A549_MK2206_60min_R1 3 APRPFGSVSSPK 12 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 APRPFGS(0.104)VS(0.414)S(0.482)PK;APRPFGS(0.001)VS(0.261)S(0.738)PK;APRPFGS(0.008)VS(0.19)S(0.802)PK 84.946 0.00012206 216396100.0 18700.7 19933.6 20172.5 17812.3 25325.5 20949.4 17989.800000000003 18017.3 28974.3 28748.8 28959.3 True False 21856.92097178144 20948.135096710444 23033.263831609183 22176.314299624544 21600.15249848699 23166.25160291375 21258.31379625702 20571.3074506671 22411.667312449466 22254.426113091245 21767.906573979897 1.00408924934968 0.9623403621986617 1.058129487708378 1.018761920180824 0.9922935136218642 1.0642388382264263 0.9765897204680208 0.9450292053006538 1.0295738469972617 1.0223503136352536 1.0 14.409915049337462 -5.709368481859353 24.999999327121508 1.0115731432543118 0.9832149103508057 0.09735966745710767 0.03365886064388743 183.54396870043362 88119.21531989318 0.004456331585052026 0.01725929025732224 1.9526819785378625e-06 5.709368481859353 -0.028358232903506142 APRPFGSVSS(ph)PK ddPTM_A549_PD325901_60min_R1 4 APRPFGSVSSPK 12 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 APRPFGS(0.005)VS(0.242)S(0.753)PK;APRPFGS(0.001)VS(0.415)S(0.584)PK;APRPFGS(0.001)VS(0.058)S(0.941)PK;APRPFGS(0.002)VS(0.301)S(0.697)PK 94.94 7.262100000000001e-05 306971500.0 40193.3 39648.5 39619.4 40754.2 45854.4 43084.5 43926.4 47391.7 47535.1 45772.7 47256.8 True False 44273.69422725641 42989.818241422836 42308.210734806446 43271.49437449634 42633.745133092256 42733.63411662042 45598.04318944837 46446.43536543055 45537.36505476307 42882.60391038215 41444.51318553692 1.0682643086927803 1.0372861191291587 1.0208398526821383 1.0440825829170794 1.0286945570389845 1.0311047429924542 1.1002190563879257 1.1206896111314242 1.0987549751375643 1.0346991824564873 1.0 15.338893496373561 APRPSAPS(ph)PPPR ddPTM_A549_MK2206_60min_R1 3 APRPSAPSPPPR 12 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 APRPS(0.073)APS(0.927)PPPR;APRPS(0.001)APS(0.999)PPPR;APRPS(0.005)APS(0.995)PPPR 100.45 6.7686e-05 135869500.0 8943.8 11575.7 10507.300000000001 8938.4 14096.0 10324.8 10110.4 10509.1 16324.900000000001 16523.8 17808.9 True False 10453.294785083915 12164.853686187698 11997.393137085995 11128.30840126002 12022.497072858294 11417.363482952436 11947.328808862632 11998.797107768958 12627.336215508438 12791.062103722503 13386.458629364328 0.7808857498841202 0.9087432324709885 0.8962335348923949 0.831310857439856 0.8981088580430026 0.852903953096862 0.8924936116154841 0.8963384148103654 0.943291767085382 0.9555224766962808 1.0 13.708486727545521 -8.983825037231721 0.5153418598458317 0.9972774069724684 0.857437602807586 0.6086285167479039 0.035822769255255224 0.29000718900383304 0.1814684689154903 0.013624450092145694 0.011037799756893217 1.037946485635235e-09 8.983825037231721 -0.1398398041648824 APRPSAPS(ph)PPPR ddPTM_A549_PD325901_60min_R1 2 APRPSAPSPPPR 12 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 APRPS(0.092)APS(0.908)PPPR;APRPS(0.01)APS(0.99)PPPR 86.54799999999999 8.4305e-05 211910000.0 8287.099999999999 9450.9 9048.4 8568.4 9978.7 9973.8 8336.5 9947.6 11230.8 10545.5 11319.0 True False 9128.400291359423 10247.36051093643 9662.478836449378 9097.650607751706 9277.830536646155 9892.576679602846 8653.750069407837 9749.18731425877 10758.80853215904 9879.655330293715 9926.834757052793 0.919568071270039 1.0322888173046207 0.9733695657202719 0.9164704390075628 0.9346212326194374 0.9965489425090301 0.8717532104842928 0.9821043215544806 1.0838105796528092 0.9952472839617323 1.0 13.27711806200754 -8.553209043743935 9.278767233703627 1.0392915508637401 0.9514739790379542 0.3397734796304078 0.04611389923857133 0.22045618894273408 63.422991154512104 0.00814904386498153 0.009260998002467822 2.7976343793378093e-09 8.553209043743935 -0.08781757182578598 APRPTRPDK ddPTM_A549_MK2206_60min_R1 1 APRPTRPDK 9 2 E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;P61313;E7ENU7;P61313-2 E7EX53 RPL15 Ribosomal protein L15;60S ribosomal protein L15 0 34.692 0.052711 10391000.0 1124.5 1070.9 1174.0 833.4 1790.2 1421.0 1188.5 1271.3 1924.8 1617.5 1704.1 False True 1314.2881086145562 1125.4042358162712 1340.4908533056973 1037.5830374127474 1526.8639514635997 1571.3692768165404 1404.4350658068165 1451.5106681929637 1488.835873273995 1252.1056265974614 1280.924939232617 1.026046154899542 0.8785871844219726 1.0465022674230744 0.8100264157822925 1.1920011116172984 1.2267457902396095 1.0964226105615469 1.133173868144485 1.1623131283289203 0.977501169855885 1.0 10.322970222504303 -6.771272452564865 24.99989575751954 1.102365548743899 0.9434696669483763 0.44416148259682153 0.0922469473541786 158.2873587268122 402435.19247637386 0.013732226085118981 0.026179925909193807 1.6932751990804203e-07 6.771272452564865 -0.15889588179552272 APRPTRPDK ddPTM_A549_PD325901_60min_R1 1 APRPTRPDK 9 2 E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;P61313;E7ENU7;P61313-2 E7EX53 RPL15 Ribosomal protein L15;60S ribosomal protein L15 0 42.743 0.024956 9853900.0 778.55 844.77 1087.3 1202.1 984.11 791.69 782.61 1016.4 942.59 1081.9 724.92 False True 857.5878228617822 915.9617326205723 1161.0907164660498 1276.3509868328179 914.9895085951928 785.2427391239829 812.3926518106244 996.1271046496252 902.976220245021 1013.5886493617916 635.7594356464979 1.3489187494161359 1.4407363560229969 1.8263051263806214 2.0076005408160533 1.4392071234691914 1.2351255759585806 1.2778302707918285 1.5668302329428627 1.42031115798823 1.5942958806912282 1.0 9.312337158659265 -11.265217810631617 0.2318130189884281 0.5774778538687934 1.6315216202948883 0.0 0.27666894950794724 5.7536278407276145 0.3296277918364236 1.7345277686557927 0.19549967784492767 5.429779448149114e-12 11.265217810631617 1.054043766426095 APS(ph)DS(ph)SLGTPSDGRPELR ddPTM_A549_MK2206_60min_R1 5 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.988)DS(0.416)S(0.338)LGT(0.153)PS(0.105)DGRPELR;APS(0.986)DS(0.515)S(0.48)LGT(0.01)PS(0.009)DGRPELR;APS(0.964)DS(0.515)S(0.472)LGT(0.044)PS(0.005)DGRPELR;APS(0.738)DS(0.699)S(0.558)LGT(0.004)PS(0.001)DGRPELR;APS(0.849)DS(0.595)S(0.541)LGT(0.014)PSDGRPELR 78.413 0.00010564 197830600.0 4851.7 5658.74 4933.33 4976.01 7146.7300000000005 5651.4800000000005 5628.91 5827.82 9388.07 7689.839999999999 7866.18 True False 5670.548347323473 5946.745695567248 5632.950375927256 6195.132673381579 6095.455484215985 6249.515862451188 6651.610085208788 6653.931331950222 7261.6871346671805 5952.6998031741705 5912.790410476401 0.9590308388533916 1.0057426836964631 0.9526720862533332 1.0477511028303859 1.030893209645303 1.0569486534442638 1.1249527927496519 1.1253453733385597 1.228132003766069 1.0067496714625732 1.0 12.529623423742429 -7.017995363706161 1.136605066082112 1.1124097202595804 0.9786605113568705 0.36528596946958436 0.06241281071222323 0.44937618164066284 1.1410838581195704 0.013535835283614964 0.03385750869674893 9.594108736147045e-08 7.017995363706161 -0.13374920890270992 APS(ph)DS(ph)SLGTPSDGRPELR ddPTM_A549_PD325901_60min_R1 5 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.667)DS(0.655)S(0.621)LGT(0.054)PS(0.002)DGRPELR;APS(0.868)DS(0.37)S(0.321)LGT(0.246)PS(0.195)DGRPELR;APS(0.788)DS(0.575)S(0.536)LGT(0.091)PS(0.009)DGRPELR;APS(0.988)DS(0.515)S(0.424)LGT(0.065)PS(0.007)DGRPELR;APS(0.981)DS(0.631)S(0.387)LGT(0.001)PSDGRPELR 100.21 5.9262000000000005e-09 274216400.0 9648.2 10608.71 10778.349999999999 11491.75 10618.08 9927.41 10026.62 10205.85 9912.48 11681.91 12827.939999999999 True False 10627.678161370563 11502.743222970981 11509.833646483821 12201.569297842152 9872.302691187417 9846.5644643823 10408.188510876997 10002.286315415564 9495.892937177743 10944.312208952762 11250.184703011553 0.9446669936472819 1.0224492776453546 1.0230795271656974 1.0845661311299115 0.8775236097719096 0.8752358049505161 0.9251571228062448 0.8890775200106767 0.8440655142875827 0.9728117802388692 1.0 13.457661067030106 -6.770919390442649 24.999975498835717 0.9150698423518875 1.0192724758357794 0.4974183760548082 0.05153688015576602 162.24717280222387 427866.8846270265 0.009437276304963611 0.01800217604126771 1.6946523162928852e-07 6.770919390442649 0.10420263348389192 APS(ph)DSS(ph)LGTPSDGRPELR ddPTM_A549_PD325901_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.993)DS(0.124)S(0.599)LGT(0.279)PS(0.004)DGRPELR 119.0 1.1947e-09 12380000.0 2170.1 2158.7 2524.4 2856.0 2281.3 2279.6 2631.1 2386.8 2606.9 2279.9 2763.3 True False 2390.4069544568156 2340.6212249583086 2695.7209644503805 3032.408633553388 2121.069358057752 2261.035693398971 2731.227950293164 2339.193401591623 2497.3410587389485 2135.9467249098307 2423.4316180019437 0.9863727685568632 0.9658292842147904 1.1123569340375827 1.251287063776749 0.8752338387853992 0.9329892688546897 1.127008466013574 0.9652401100222614 1.0304978445391173 0.8813728058359093 1.0 11.242835659198034 -6.791941039402775 24.999996805384466 1.0053003227270958 1.0732666674612719 0.16504278326343635 0.09857976772884838 347.87773447236475 285129.1003299048 0.013116375374194066 0.024789913568019215 1.6145777399154943e-07 6.791941039402775 0.06796634473417607 APS(ph)DSSLGT(ph)PSDGRPELR ddPTM_A549_PD325901_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.996)DS(0.003)S(0.002)LGT(0.648)PS(0.351)DGRPELR 114.01 1.267e-09 10694000.0 1803.8 2377.5 2499.3 2519.4 2616.0 2690.0 2284.5 2209.9 2660.2 3079.2 2977.2 True False 1986.9204481126237 2577.860268836975 2668.917527511819 2675.017616027455 2432.2611847100684 2668.093531866658 2371.437897626367 2165.821810866989 2548.4010450946903 2884.7787865004398 2611.0232740257597 0.7609738556826902 0.9872988473451434 1.022173013186817 1.0245092958911188 0.9315356201172155 1.0218574297704002 0.9082408116454694 0.8294915761235844 0.9760162118989784 1.1048460636862094 1.0 11.350399602202499 -11.661388006866115 0.008141912289854367 1.9863017625268442 1.4049170851926652e-07 0.14287669836359795 0.08629243385592902 15360.591202367752 20.126559221812524 2598.2378181822255 2317.845074503013 2.1807806907129956e-12 11.661388006866115 -1.9863016220351357 APS(ph)DSSLGTPS(ph)DGRPELR ddPTM_A549_MK2206_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.994)DS(0.005)S(0.003)LGT(0.063)PS(0.934)DGRPELR 75.376 0.0015526 6480100.0 570.22 690.4 603.23 328.32 873.08 549.76 687.96 544.5 596.51 764.64 1166.5 True False 666.4591954594868 725.5384110631742 688.7770847015295 408.75841473884503 744.6510885620822 607.935238298847 812.9534269015209 621.6845424613144 461.4014374307307 591.9072929344564 876.8258562378073 0.7600815951288893 0.8274601004311603 0.7855346415728001 0.4661797001433134 0.8492576755858378 0.693336349485988 0.9271549431601577 0.709017119007842 0.526217873421826 0.6750568413597545 1.0 9.776146531544944 -11.07913472009727 1.4170161846669769 0.9991787826226729 0.7061938566391449 0.0 0.15953721963268286 0.3571235148753599 1.2863305788727522 0.09798764093341443 0.021827845307548437 8.334226130819519e-12 11.07913472009727 -0.292984925983528 APS(ph)DSSLGTPS(ph)DGRPELR ddPTM_A549_PD325901_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.949)DS(0.042)S(0.02)LGT(0.307)PS(0.681)DGRPELR 89.87700000000001 1.9441e-05 8799100.0 781.15 970.56 663.04 920.1 888.46 914.95 1112.8 928.96 711.24 970.33 830.4 True False 860.4517729477631 1052.352497380616 708.0378815834177 976.9324873012865 826.0576346206066 907.4989505507056 1155.1482129475257 910.4311640449783 681.3490562037248 909.0631982024465 728.2660643393091 1.1815074394937986 1.4450110322459162 0.9722241859858697 1.341449966074652 1.1342800043415657 1.2461090733013882 1.5861623512493181 1.2501353675883984 0.9355771050815777 1.2482569801287646 1.0 9.508321809946793 -8.74009361827492 8.36221764515103 0.9695317987999623 1.273560376163051 0.17308324472750747 0.17357744506505776 0.12493487397292978 39.93552625273674 0.02482485315800988 0.02783277251275815 1.819308638809319e-09 8.74009361827492 0.30402857736308864 APS(ph)DSSLGTPSDGRPELR ddPTM_A549_MK2206_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.787)DS(0.181)S(0.032)LGTPSDGRPELR 158.52 3.206e-23 175350000.0 2679.8 1909.9 2533.3 1799.8 2662.3 2348.4 2188.8 1961.4 3024.2 2983.1 3733.9 True False 3132.0847251803375 2007.1057521575287 2892.5600329466147 2240.7510807960907 2270.6791967274844 2596.906129258244 2586.4766277138906 2239.4344565355773 2339.223528655038 2309.215638147072 2806.6695796025306 1.1159435182334114 0.7151200721111486 1.0306022675302762 0.7983665398594647 0.8090297529960934 0.9252625061857148 0.921546535620405 0.7978974343152703 0.8334516986450217 0.8227600622920828 1.0 11.454643514551822 -10.879451420220516 1.148022618830506 0.9994819401515321 0.8744957965546631 0.0 0.12050441232308687 0.6783482875116391 1.5981615275615915 0.06648384366986873 0.016300283571646666 1.319922948811213e-11 10.879451420220516 -0.12498614359686899 APS(ph)DSSLGTPSDGRPELR ddPTM_A549_PD325901_60min_R1 2 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.868)DS(0.082)S(0.05)LGTPSDGRPELR;APS(0.364)DS(0.271)S(0.364)LGTPSDGRPELR 207.1 2.7032999999999996e-50 445430000.0 19292.3 24720.0 20322.7 23235.2 23846.9 24402.0 20555.2 24422.5 22972.0 26350.0 25402.4 True False 21250.84009375938 26803.241154847536 21701.92063232281 24670.385533032124 22171.97601133889 24203.27820245731 21337.439384237045 23935.374078419383 22006.56672728189 24686.256503080866 22278.065839081002 0.9538907123831358 1.2031224500570559 0.9741384547958604 1.107384532895779 0.9952379246695643 1.0864173926624738 0.9577779120665908 1.0743919266290645 0.9878131650314617 1.1080969363047364 1.0 14.443336364225026 -7.736721704718032 0.656306740611788 0.9946675962041159 1.0638206297177737 0.0 0.07898003589109812 0.9943563817451505 0.8675925710320708 0.013818039932831429 0.027416464810722966 1.8334889431040743e-08 7.736721704718032 0.06915303351365776 APS(ph)EEEALEK ddPTM_A549_MK2206_60min_R1 2 APSEEEALEK 10 0 Q14147 Q14147 DHX34 Probable ATP-dependent RNA helicase DHX34 1 APS(1)EEEALEK;APS(1)EEEALEK 134.13 7.979699999999999e-07 7408100.0 3853.0 3810.5 3641.5 3752.3 4656.6 3724.1 3204.0 4209.3 4651.2 4715.1 5094.4 True False 4503.292203194209 4004.4381740385684 4157.919456825126 4671.61366844715 3971.6203085607194 4118.181790142491 3786.1253267522425 4805.981165440611 3597.7106264401523 3649.9556352208283 3829.319881712719 1.1760031395392452 1.0457309124688547 1.085811471818185 1.2199591083411143 1.0371607573260122 1.0754342591772652 0.9887200452574474 1.2550482367357272 0.9395168692021163 0.9531602864131404 1.0 11.902872465217031 -8.813694196560364 24.999997187791887 0.9714384402053412 1.1034816146640831 0.41147162924402325 0.07744238476921347 70.79338621652646 33868.964600723426 0.012734513738573296 0.013556928779697294 1.5356979461391067e-09 8.813694196560364 0.13204317445874192 APS(ph)EIDPR ddPTM_A549_MK2206_60min_R1 3 APSEIDPR 8 0 O95801 O95801 TTC4 Tetratricopeptide repeat protein 4 1 APS(1)EIDPR;APS(1)EIDPR;APS(1)EIDPR 91.265 0.0026145 37094300.0 3264.17 3757.8700000000003 3536.6400000000003 2948.9900000000002 4624.52 3872.04 3551.49 4173.9400000000005 5097.82 4579.09 5498.719999999999 True False 3815.0820947055367 3949.1295318394723 4038.1887320571227 3671.492682385193 3944.259234064603 4281.776702747866 4196.749761768823 4765.608777155152 3943.17190954574 3544.6703886838786 4133.236067048399 0.9230254533779727 0.9554570481282963 0.9770041358757545 0.8882852619175602 0.9542787225509849 1.0359380962736886 1.0153665780734804 1.1529969979571817 0.9540156539768159 0.8576017268752755 1.0 12.013056049302211 -7.01957978414603 22.21240006973965 0.9988753561295068 0.9378963159447383 0.17500248778067462 0.06868318819140722 228.02148331650673 258681.86397613812 0.008600206294332077 0.01506593095947731 9.559170675688132e-08 7.01957978414603 -0.06097904018476852 APS(ph)EIDPR ddPTM_A549_PD325901_60min_R1 2 APSEIDPR 8 0 O95801 O95801 TTC4 Tetratricopeptide repeat protein 4 1 APS(1)EIDPR;APS(1)EIDPR 68.22399999999999 0.0076391 9728200.0 831.1500000000001 769.24 746.74 882.25 934.5 757.78 1130.02 740.66 1066.5700000000002 1016.6899999999999 1084.99 True False 915.5277361397086 834.0665544480147 797.4182669124057 936.7445787648727 868.8639438499843 751.608890921158 1173.0235294706706 725.8869552634702 1021.7457719970851 952.496019890599 951.5431083182891 0.9621505616889683 0.8765410070828039 0.8380264224935892 0.98444786218927 0.9131104374089494 0.7898842252659629 1.232759208927292 0.7628524119588942 1.073777701782601 1.001001438152386 1.0 9.894125207018353 -7.723713558500605 24.999999497708963 1.024493251791226 0.8956640492916474 0.21331662903415116 0.11397615469835784 176.77128524972537 117141.73682657813 0.01606041012519252 0.02382114382925777 1.889236995721463e-08 7.723713558500605 -0.12882920249957852 APS(ph)ERPGTSSGTFSPVRLDESGEDEVFLQENK ddPTM_A549_PD325901_60min_R1 1 APSERPGTSSGTFSPVRLDESGEDEVFLQENK 32 2 E5RJ29;Q9NYI0-2;Q9NYI0 E5RJ29 PSD3 PH and SEC7 domain-containing protein 3 1 APS(0.167)ERPGT(0.167)S(0.167)S(0.167)GT(0.167)FS(0.167)PVRLDESGEDEVFLQENK 102.94 8.1646e-15 4697900.0 1190.8 961.37 1278.0 1265.8 1349.8 1753.0 1032.9 1425.0 1052.7 1392.3 1486.2 True False 1311.6891393793733 1042.388023828308 1364.7327652383087 1343.9855911596223 1254.9947045572053 1738.7241492052983 1072.2075747245672 1396.577257109126 1008.4586798628604 1304.3899403885957 1303.4068217980262 1.0063543610811563 0.7997411141291654 1.0470505005917374 1.0311328502221728 0.9628572473066872 1.3339842328021267 0.8226192749593532 1.071482236975385 0.7737098371724876 1.0007542684096231 1.0 10.348071735556431 -8.743060181340207 24.996462740322947 0.8931407337676847 1.0074350154270504 0.051933008998661156 0.14441504035120095 404.3720221880559 549962.2010746624 0.024860838909265527 0.028163787539770717 1.8069237184411418e-09 8.743060181340207 0.11429428165936573 APS(ph)IDGKEELDLAEK ddPTM_A549_MK2206_60min_R1 2 APSIDGKEELDLAEK 15 1 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128;B5MCW3;Q9H0E9;H0YAH7;H0YA84 H7C179 BRD8 Bromodomain-containing protein 8 1 APS(1)IDGKEELDLAEK;APS(1)IDGKEELDLAEK 142.98 4.6586e-14 90051000.0 4191.6 4152.8 4082.0 3319.5 5121.1 4369.7 3920.9 4928.200000000001 6179.9 5901.1 5626.8 True False 4899.039605219008 4364.159781957054 4660.888980573983 4132.777649018015 4367.792973880151 4832.0987536278935 4633.276777048332 5626.787441979522 4780.162517272422 4568.037411508055 4229.510268220227 1.1582994943952503 1.0318357221517014 1.1019925913397248 0.9771291206149697 1.0326947322244269 1.1424724015769407 1.0954641278121333 1.3303638211398094 1.1301929098481438 1.0800393241343944 1.0 12.04627490911536 -5.231977135382236 21.721597820597978 1.0806163619098164 1.1583000812286097 0.02795745831609353 0.09106449932607849 4665.247959919323 3439205.3953730282 0.01347623863034097 1.4723457072584816 5.86169024169035e-06 5.231977135382236 0.07768371931879337 APS(ph)IDGKEELDLAEK ddPTM_A549_PD325901_60min_R1 3 APSIDGKEELDLAEK 15 1 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128;B5MCW3;Q9H0E9;H0YAH7;H0YA84 H7C179 BRD8 Bromodomain-containing protein 8 1 APS(1)IDGKEELDLAEK;APS(1)IDGKEELDLAEK;APS(1)IDGKEELDLAEK 197.0 5.4068e-39 161386500.0 40609.3 39940.1 40387.1 40239.6 46295.0 40303.1 41197.6 42520.6 42237.5 45441.2 46957.3 True False 44731.92624101341 43305.99239679315 43128.01147336156 42725.108701237725 43043.398909079755 39974.88491605022 42765.397212191754 41672.493276234585 40462.40475986283 42572.03487695626 41181.84978685001 1.0862048808525593 1.0515795822901917 1.0472577530291751 1.0374742495146612 1.0452031448772892 0.9706918247469012 1.0384525569768697 1.0119140711727146 0.9825300458646005 1.0337572279366178 1.0 15.329721013268502 -5.998146636366565 0.42735145288957216 0.9917616362343267 1.1074839392892852 0.49130765881210836 0.02279537211697404 1.216202239193322 0.22029448354184006 0.004643974492630845 0.06379783865899676 1.0042766463366675e-06 5.998146636366565 0.11572230305495856 APS(ph)LTDLVK ddPTM_A549_MK2206_60min_R1 2 APSLTDLVK 9 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 APS(0.996)LT(0.004)DLVK;APS(0.998)LT(0.002)DLVK 128.81 5.0866000000000004e-05 16211500.0 2380.86 2485.1 2357.37 2080.19 3134.8 2886.49 2455.64 2698.43 3996.7999999999997 3456.77 3695.5 True False 2782.6909615616296 2611.5809752796845 2691.68051350703 2589.836643383276 2673.675072644451 3191.936455903008 2901.7980016809834 3080.940716095288 3091.531181578089 2675.8832561689683 2777.805359388615 1.0017587993184986 0.9401598158967063 0.9689953633394454 0.932331934140011 0.9625134689901085 1.1490857144164852 1.0446369080084352 1.1091276448445588 1.1129401745623113 0.9633084071656915 1.0 11.439729797990523 -7.151295090990313 9.824602198390885 1.0644636928629496 0.9584413279992927 0.4918684166350248 0.05160604820161647 0.26253364280868763 21.854088293627164 0.007626289189221629 0.013220732612933323 7.058377941904962e-08 7.151295090990313 -0.1060223648636569 APS(ph)LTDLVK ddPTM_A549_PD325901_60min_R1 2 APSLTDLVK 9 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 APS(0.974)LT(0.026)DLVK;APS(1)LTDLVK 112.13 0.0002917 26954000.0 6777.0 7078.200000000001 7195.1 7130.7 7733.799999999999 7117.2 7493.0 7621.6 7541.5 8017.1 7837.1 True False 7464.996051036283 7674.704754945064 7683.402753651134 7571.147144005303 7190.60456816159 7059.239882900139 7778.150215326933 7469.581208970464 7224.556981272694 7510.898937793153 6873.186383470138 1.086104120352306 1.1166152533565161 1.1178807506412962 1.1015483534992947 1.046182100554531 1.0270694680821482 1.1316658361008822 1.0867712283977402 1.0511219364933264 1.0927826656726056 1.0 12.746763366805137 -10.552688596821998 0.18561411967410327 0.9327992964679399 1.1204832630652026 0.0 0.040871450099715136 4.5583470916601 0.2624949061094432 0.22027308364260492 0.05575472291822879 2.8009889993908555e-11 10.552688596821998 0.18768396659726272 APS(ph)LTNDEVEEFR ddPTM_A549_MK2206_60min_R1 2 APSLTNDEVEEFR 13 0 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 APS(0.927)LT(0.073)NDEVEEFR;APS(0.651)LT(0.349)NDEVEEFR 179.56 1.4795e-22 38867000.0 4472.2 5080.3 4342.0 4683.2 7373.0 4521.2 4167.5 5213.299999999999 7170.8 7193.1 7203.0 True False 5226.9980252076675 5338.8655702842525 4957.760890164684 5830.584210236835 6288.441466954038 4999.63038307033 4924.680805006232 5952.301240061653 5546.62524941457 5568.173714175086 5414.2963073132705 0.9654067174246425 0.9860682288615916 0.9156796393777102 1.0768867973408236 1.1614512967197659 0.9234127759718586 0.9095698730699872 1.0993674712670751 1.024440653889326 1.028420573630957 1.0 12.402558128512318 -6.252459633290741 24.977243439438794 1.0186749615631923 0.9587532027005036 0.16396750972358998 0.07031518332707021 1076.1737426958982 2993378.9583382066 0.00974868696288537 0.025389987501250114 5.591654983486364e-07 6.252459633290741 -0.05992175886268869 APS(ph)PAPSSVPLGSEKPSNVSQDR ddPTM_A549_MK2206_60min_R1 2 APSPAPSSVPLGSEKPSNVSQDR 23 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(0.999)PAPS(0.001)SVPLGSEKPSNVSQDR;APS(0.999)PAPS(0.001)SVPLGSEKPSNVSQDR 119.14 7.0879e-16 463280000.0 4238.8 5235.799999999999 4199.6 5342.8 6257.1 5042.299999999999 4812.5 5444.9 6891.1 7556.6 7466.5 True False 4954.205811289801 5502.279856090051 4795.166428911933 6651.7862398474035 5336.688878730252 5575.872839192149 5686.868955991001 6216.731249306907 5330.276852825453 5849.558811713376 5612.36198508323 0.8827309828655557 0.980385775314251 0.8543936477470139 1.1852026397311504 0.9508810894440392 0.9934984332820898 1.0132755105792888 1.1076853677346534 0.9497386068454752 1.0422632801056984 1.0 12.454392347298198 APS(ph)PAPSSVPLGSEKPSNVSQDR ddPTM_A549_PD325901_60min_R1 2 APSPAPSSVPLGSEKPSNVSQDR 23 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(0.993)PAPS(0.007)SVPLGSEKPSNVSQDR;APS(0.988)PAPS(0.009)S(0.002)VPLGSEKPSNVSQDR 77.984 2.3404e-05 720770000.0 6015.0 6804.4 6725.2 6823.4 8353.6 8059.400000000001 7398.3 8079.0 7781.5 8145.5 8267.599999999999 True False 6625.638371991038 7377.83066804388 7181.6125139128835 7244.865920934239 7766.871954355518 7993.766918485551 7679.846355005099 7917.8580071471115 7454.470615895178 7631.191739880276 7250.737612634476 0.913788186245466 1.017528293285354 0.9904664735624771 0.999190193879033 1.0711837014790981 1.102476374894099 1.0591813916452992 1.0920072453525518 1.0280982451917298 1.0524710929523715 1.0 12.823912051646264 -4.073521403674316 0.9775293418811551 1.031157645072621 5.380534546010028e-15 0.4890171561552994 0.03684586505336027 13.344095259193907 1.5907588766588145 0.0063769562632530275 24.670893290398737 8.442646323300861e-05 4.073521403674316 -1.0311576450726156 APS(ph)PAPSSVPLGSEKPSNVSQDRK ddPTM_A549_MK2206_60min_R1 2 APSPAPSSVPLGSEKPSNVSQDRK 24 2 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(0.998)PAPS(0.001)S(0.001)VPLGSEKPSNVSQDRK;APS(0.999)PAPS(0.001)SVPLGSEKPSNVSQDRK 102.05 2.4581e-11 15250300.0 2091.06 2739.0 2469.59 1818.1 3373.6 2199.75 2411.5 2200.77 3299.7 3490.2000000000003 3710.9 True False 2443.9798064913775 2878.4034007851023 2819.814996946523 2263.5345816176105 2877.347908980896 2432.5260849241267 2849.638335038398 2512.735887075459 2552.3232185381353 2701.761395950827 2789.3811143702346 0.8761727803707314 1.0319147089496827 1.0109106218650081 0.8114827228005572 1.031536312538103 0.8720665929773186 1.0216023620285275 0.900822004612577 0.9150141604491288 0.9685881151313417 1.0 11.445729348554435 -10.969798364050455 1.2628153665096187 0.9997161171679192 0.9411581825992494 0.04539552041008765 0.07178856672705279 0.9062091107854069 2.590432756477584 0.04498478881339494 0.01061567472116404 1.07201690993946e-11 10.969798364050455 -0.058557934568669756 APS(ph)PAPSSVPLGSEKPSNVSQDRK ddPTM_A549_PD325901_60min_R1 2 APSPAPSSVPLGSEKPSNVSQDRK 24 2 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(1)PAPSSVPLGSEKPSNVSQDRK;APS(0.999)PAPS(0.001)SVPLGSEKPSNVSQDRK 129.57 3.3844e-23 10345800.0 3060.7 2653.7 2605.7 3128.8999999999996 3271.0 3030.0 2734.5 2961.2 3522.7000000000003 3269.0 3464.8 True False 3371.4200108317473 2877.3366121609597 2782.5384713469953 3322.16504675252 3041.2562443373977 3005.3246845932986 2838.562893875815 2902.136542983538 3374.6531695192366 3062.5947821089717 3038.6515651768295 1.1095118800287826 0.9469123229314769 0.9157148859168622 1.0933023992697208 1.000857182570854 0.9890323454767044 0.9341521503833985 0.9550738150573881 1.1105758910277868 1.0078795532882194 1.0 11.569215538656481 -8.747861812281526 24.99998688816144 1.0522163981517656 0.9904547441381127 0.08484714642663493 0.06386378201715838 331.2063704928236 609840.0558423512 0.011433148779000753 0.012931567914775044 1.7870561059577051e-09 8.747861812281526 -0.061761654013652856 APS(ph)PARPFLK ddPTM_A549_MK2206_60min_R1 4 APSPARPFLK 10 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APS(1)PARPFLK;APS(1)PARPFLK;APS(1)PARPFLK;APS(1)PARPFLK 85.67200000000001 0.00022794 375993600.0 18651.6 18698.3 20850.1 17613.7 23540.399999999998 19224.5 19364.0 18628.2 26450.3 25614.700000000004 27004.6 True False 21799.5340921612 19649.96360310336 23806.95770060402 21929.057290709028 20077.63834377932 21258.823829809713 22882.188148324098 21268.80439646989 20459.349282449686 19828.321479818253 20298.612530955426 1.0739420765294605 0.9680446667542978 1.1728366982865632 1.080322965782374 0.9891138280097164 1.047304282368559 1.1272784341012823 1.047795969504562 1.0079186077988895 0.9768313696111013 1.0 14.309093497939248 -8.706016652097679 4.060533690008285 1.003509142630373 1.0642716108081356 0.24139550447056612 0.05401196283244675 0.24996205375565156 8.39972848353966 0.00900621820663836 0.010055277963050387 1.96781083674151e-09 8.706016652097679 0.06076246817776254 APS(ph)PARPFLK ddPTM_A549_PD325901_60min_R1 6 APSPARPFLK 10 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APS(1)PARPFLK;APS(1)PARPFLK;APS(1)PARPFLK;APS(1)PARPFLK;APS(1)PARPFLK;APS(1)PARPFLK 117.98 1.9370999999999998e-05 720448500.0 48862.100000000006 46301.1 49983.7 47262.200000000004 56114.5 48712.0 50220.1 51288.0 53138.200000000004 51614.7 53238.5 True False 53822.544421623155 50203.056190724594 53375.89445840534 50181.47875375596 52173.21110451573 48315.30562241214 52131.25338699317 50265.02060534235 50904.986247068206 48355.73903338017 46690.502006657436 1.1527514613989112 1.075230593656207 1.1431852767570299 1.0747684560470299 1.1174266470100607 1.0347994462668881 1.116528012047503 1.076557724699024 1.0902642734449468 1.035665434192275 1.0 15.510841479772767 -14.99999999999984 0.1710811125862035 0.6022614045342762 1.1214502448671262 0.5008952631108151 0.03193052406283708 23.976709250980967 0.25827709840295393 3.1873187923546875 0.035727398108468096 1.000000000000368e-15 14.99999999999984 0.51918884033285 APS(ph)PARPK ddPTM_A549_MK2206_60min_R1 3 APSPARPK 8 1 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 APS(1)PARPK;APS(1)PARPK;APS(1)PARPK 61.353 0.0030318000000000003 114439500.0 7274.62 7038.16 7559.37 5912.030000000001 9534.2 7030.96 6281.33 6605.379999999999 10014.5 10867.0 9687.6 True False 8502.398008616832 7396.372281588052 8631.4023353948 7360.477615401116 8131.73180987837 7774.971520426476 7422.566354147516 7541.7128431278525 7746.231739870337 8412.13715254072 7281.901555841737 1.1676068322835236 1.015719894709986 1.185322579439495 1.0107905962414918 1.1167044414868361 1.0677117042579607 1.019317042015342 1.0356790441746206 1.0637649631030925 1.1552116007105695 1.0 12.830099521756113 -2.0000000074212756 0.07171264860375742 0.9336373040344964 1.4027235653427985 0.0 0.06729863069250788 167.50267259042195 0.8602626549515938 0.9431891635299758 7.89229560129364 0.009999999829118816 2.0000000074212756 0.4690862613083021 APS(ph)PARPK ddPTM_A549_PD325901_60min_R1 4 APSPARPK 8 1 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 APS(1)PARPK;APS(1)PARPK;APS(1)PARPK;APS(1)PARPK 82.749 0.0021983000000000003 177687800.0 17135.9 17890.7 18774.500000000004 17350.5 21353.399999999998 19309.2 20153.6 19067.100000000002 19603.699999999997 19021.1 21073.9 True False 18875.523953217165 19398.41207641711 20048.65047023993 18422.200979155503 19853.610849230867 19151.952277144857 20920.556276473086 18686.791732649417 18779.82466270311 17820.104499838773 18481.943898458787 1.0212953819641883 1.0495872178269487 1.0847695772906112 0.9967674980710083 1.0742165953055653 1.0362520513192306 1.1319456649913138 1.0110836736284927 1.0161173935967398 0.9641899465631857 1.0 14.173828884419091 -8.476746775177812 24.999894161521215 1.0079261816751077 1.05604015609816 0.37117475962936375 0.03582006073103554 354.1775529839062 191936.5618428028 0.0050976186502925715 0.006162609644531103 3.336208809577394e-09 8.476746775177812 0.04811397442305232 APS(ph)PEPAAPR ddPTM_A549_MK2206_60min_R1 2 APSPEPAAPR 10 0 P20749 P20749 BCL3 B-cell lymphoma 3 protein 1 APS(1)PEPAAPR;APS(1)PEPAAPR 139.32 1.9629999999999998e-07 233550000.0 6263.4 6405.6 5294.5 5424.700000000001 7247.7 5572.6 5039.700000000001 5322.799999999999 9079.2 8849.2 7898.0 True False 7320.50879457218 6731.6176794702615 6045.33971279984 6753.751743524037 6181.5729309701355 6162.288833207497 5955.348255066568 6077.323200391342 7022.775696503147 6850.159573963681 5936.708626289071 1.2330921484263744 1.1338972658454478 1.0182982007959303 1.1376256051403495 1.0412458013514005 1.037997520363305 1.0031397243743707 1.0236856114985327 1.1829409422932984 1.1538648778600396 1.0 12.535447592021093 -5.405396396680105 3.2141241032096546 1.072010602176187 1.2358117761143075 0.3937292248003419 0.06103880512298666 0.26467946199076686 4.451150064920981 0.010055846280000533 0.08677706221062334 3.931910315877584e-06 5.405396396680105 0.16380117393812044 APS(ph)PEPAAPR ddPTM_A549_PD325901_60min_R1 2 APSPEPAAPR 10 0 P20749 P20749 BCL3 B-cell lymphoma 3 protein 1 APS(1)PEPAAPR;APS(1)PEPAAPR 79.65899999999999 0.0012444 315840000.0 1646.53 1632.46 1723.12 1322.53 2207.3 1601.8899999999999 1713.9299999999998 1877.5300000000002 1746.1 1913.54 2297.2 True False 1813.6845134886792 1770.0331333188687 1840.0612851623096 1404.2196744164444 2052.2668627716102 1588.8447389449366 1779.154544048482 1840.081191256209 1672.7174892263135 1792.7187578332207 2014.6589631506029 0.9002439354065008 0.8785770523418124 0.9133363605544184 0.6970011799021659 1.018667129429288 0.7886420322277468 0.883104573324991 0.9133462411814939 0.8302732719638326 0.889837332582432 1.0 10.976319927974941 -10.874390292915011 0.9854865127860001 1.0045114975627893 0.8666135523498065 0.053325545866041546 0.08327481109674506 0.5643716242454498 0.918960924901458 0.057462608329245164 0.012140477095483174 1.3353948809243248e-11 10.874390292915011 -0.13789794521298282 APS(ph)PGAYK ddPTM_A549_MK2206_60min_R1 2 APSPGAYK 8 0 P54259 P54259 ATN1 Atrophin-1 1 APS(1)PGAYK;APS(1)PGAYK 72.243 0.0057469999999999995 50244000.0 9900.9 10588.8 9389.9 9113.0 12792.9 9469.5 9356.8 10035.5 13449.7 13601.9 14168.1 True False 11571.929866235534 11127.724691578424 10721.529014868118 11345.685409098121 10911.081356652163 10471.556204654635 11056.809443619031 11458.062857429793 10403.364424757508 10529.221343070185 10649.769750332525 1.0865896763518494 1.0448793685169555 1.0067381047870403 1.0653456060628792 1.0245368315414969 0.9832659719547152 1.0382205158260625 1.0758977072787916 0.976862849493312 0.9886806560058656 1.0 13.378534619048047 -2.0000000000000053 0.18292699514830632 0.9846960081283446 1.3578296282887727 0.313776717952997 0.030482926343637036 41.83120574495129 0.44330853216335764 0.03288192085486049 4.408222440379 0.009999999999999877 2.0000000000000053 0.37313362016042817 APS(ph)PGAYK ddPTM_A549_PD325901_60min_R1 2 APSPGAYK 8 0 P54259 P54259 ATN1 Atrophin-1 1 APS(1)PGAYK;APS(0.996)PGAY(0.004)K 86.18 0.0028396999999999997 113917000.0 8640.8 8230.5 8154.0 8308.7 9563.099999999999 8868.3 8248.5 9623.2 9296.7 9562.099999999999 10189.3 True False 9518.00765497924 8924.113119942267 8707.379473985256 8821.909528573196 8891.420846903995 8796.079505075497 8562.401181252395 9431.257726745645 8905.992029145107 8958.347374121802 8936.080695294466 1.0651210502151354 0.9986607579138692 0.9744069879058234 0.9872235747847052 0.9950023002350473 0.984333043199499 0.9581830640541505 1.0554132229034066 0.9966329012488436 1.0024917723537414 1.0 13.125426498479678 APS(ph)PGDYK ddPTM_A549_PD325901_60min_R1 1 APSPGDYK 8 0 P55198 P55198 MLLT6 Protein AF-17 1 APS(0.999)PGDY(0.001)K 52.79 0.026391 27789000.0 4354.8 5061.0 5269.7 5284.3 6039.7 4917.3 5631.4 5051.0 5685.2 5130.4 6362.8 True False 4796.896090165677 5487.508231581048 5627.3335312803665 5610.699209483955 5615.492307833864 4877.2551391256175 5845.706008620322 4950.253842567153 5446.270814815559 4806.46566844046 5580.2159371124235 0.8596255313818396 0.9833863587760461 1.0084436865345259 1.005462740638547 1.0063216855976536 0.874026237351925 1.047577024706553 0.88710793602886 0.9759964266963158 0.8613404432029285 1.0 12.446105235636534 -9.688071469231582 1.444820187870646 0.9945839643408596 0.9640051323483027 0.0 0.07115503647681146 0.8920103459521258 3.7613582588157177 0.014012943151552737 0.010217511902921961 2.0508246591714746e-10 9.688071469231582 -0.030578831992556954 APS(ph)PLGPTR ddPTM_A549_MK2206_60min_R1 2 APSPLGPTR 9 0 I3L2L9;E7EVV8;Q0VG06-3;Q0VG06 I3L2L9 C17orf70;FAAP100 Fanconi anemia-associated protein of 100 kDa 1 APS(0.998)PLGPT(0.002)R;APS(1)PLGPTR 94.69200000000001 0.00094091 19181800.0 3413.3999999999996 3924.9 3087.6 3132.8 4733.7 3938.4 3330.8 3382.0 4893.4 5062.5 5251.9 True False 3989.4984703823275 4124.660645396661 3525.468107893244 3900.3361406367376 4037.379000694473 4355.1588739016615 3935.9632454264574 3861.408856940618 3785.052713154078 3918.8777339410503 3947.7082849338544 1.0105859355434044 1.0448240720161954 0.8930416974698815 0.9880000899565174 1.022714625622881 1.1032119294434224 0.9970248461487843 0.9781393604176398 0.9587974693062961 0.9926968892045965 1.0 11.946799670751123 APS(ph)PLGPTR ddPTM_A549_PD325901_60min_R1 1 APSPLGPTR 9 0 I3L2L9;E7EVV8;Q0VG06-3;Q0VG06 I3L2L9 C17orf70;FAAP100 Fanconi anemia-associated protein of 100 kDa 1 APS(0.987)PLGPT(0.013)R 64.692 0.0061591 14022000.0 6110.1 6454.4 5081.3 5318.7 7225.6 5078.4 5578.2 5880.1 6307.5 5626.8 7002.0 True False 6730.392853982118 6998.3349397187685 5426.147574339135 5647.224019355887 6718.098782966773 5037.04319413815 5790.481453508167 5762.816792650786 6042.417709922102 5271.5228877243035 6140.798389335074 1.0960126725005355 1.1396457750303293 0.8836224917859058 0.9196237461831684 1.0940106411300388 0.8202586821423984 0.9429525423867825 0.9384474830926316 0.9839791712452517 0.8584425922335328 1.0 12.58421052290478 -5.745007552613965 24.99950192300702 0.9703944138950139 1.1178293173380867 0.4035701704551755 0.0764250070937812 174.729428287597 265830.18443034147 0.009130598201267258 0.035156652988827995 1.7988396320708044e-06 5.745007552613965 0.14743490344307275 APS(ph)PLPK ddPTM_A549_MK2206_60min_R1 2 APSPLPK 7 0 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 APS(1)PLPK;APS(1)PLPK 85.676 0.013496000000000001 74770000.0 7835.299999999999 7789.6 7658.5 6857.1 10586.3 7931.7 7595.1 7702.6 10708.2 10658.6 11687.0 True False 9157.707085306922 8186.05736792831 8744.590460001438 8537.089807826913 9029.069293586808 8771.027229363655 8975.031357433192 8794.467138223177 8282.809797481601 8250.81485728081 8784.795355208971 1.0424496775416436 0.9318438320904495 0.9954233543774366 0.9718029234186792 1.0278064460810683 0.9984327323188978 1.0216551432938525 1.0011009685055976 0.9428574557027426 0.9392153742532504 1.0 13.100792963216286 APS(ph)PLPK ddPTM_A549_PD325901_60min_R1 2 APSPLPK 7 0 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 APS(1)PLPK;APS(1)PLPK 77.732 0.017093 112694000.0 6463.1 6542.200000000001 6781.6 6275.799999999999 6972.5 7063.5 6857.0 7732.200000000001 7832.9 7519.799999999999 9213.0 True False 7119.229154117254 7093.5341538528955 7241.840157073641 6663.441912624073 6482.775653819166 7005.977197895962 7117.946887294376 7577.975205206442 7503.710452643487 7044.998544662899 8079.859406018854 0.8811080485898051 0.8779279189646264 0.896282941715427 0.8246977549708769 0.8023376804044403 0.867091473482455 0.8809493494394309 0.9378845378870642 0.9286931957075661 0.8719209321160878 1.0 12.980114474173305 -8.969228746642274 0.602033400273183 0.9883186501037124 0.8558352967548374 0.23503017289361972 0.044905407349471946 0.256682608797173 0.20829347675022744 0.011277373434396606 0.009626435465322448 1.073423881820219e-09 8.969228746642274 -0.13248335334887507 APS(ph)PPLSQVFQTR ddPTM_A549_MK2206_60min_R1 2 APSPPLSQVFQTR 13 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 APS(1)PPLSQVFQTR;APS(1)PPLSQVFQTR 219.95 2.7512e-38 107783000.0 11577.5 12649.5 11307.3 9568.2 15141.3 11718.8 11223.400000000001 11396.9 16565.9 16150.2 18522.5 True False 13531.498957301043 13293.305519617066 12910.845166595838 11912.409429532827 12914.034827558817 12958.875637690122 13262.546501957275 13012.445476542427 12813.750100306363 12501.85860319897 13922.852055006253 0.971891312486906 0.9547832202122107 0.9273132484341434 0.8556012361884913 0.9275423438055787 0.9307630064940959 0.9525739733180925 0.9346106261226507 0.9203394570079418 0.897938048454926 1.0 13.765167152815732 -10.79730298694723 0.74727036260201 1.0067916956138823 0.9287030496859066 0.0 0.041147038655270446 0.640596663682048 0.5424848894571322 0.03145612314062006 0.005628674020541849 1.5947661652809338e-11 10.79730298694723 -0.07808864592797571 APS(ph)PPLSQVFQTR ddPTM_A549_PD325901_60min_R1 4 APSPPLSQVFQTR 13 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 APS(1)PPLSQVFQTR;APS(1)PPLSQVFQTR;APS(1)PPLSQVFQTR;APS(1)PPLSQVFQTR 218.21 6.5191e-38 167500000.0 29392.1 27856.699999999997 28561.399999999998 27704.800000000003 34137.7 34029.7 31062.6 32601.800000000003 32935.899999999994 34153.2 35344.9 True False 32375.964354679578 30204.281872097137 30499.74835765054 29416.062573834017 31739.985720671582 33752.57340571108 32244.70424110695 31951.531523382677 31551.71866067748 31996.761123378423 30997.701369781385 1.044463393219273 0.9744039247226981 0.9839358084591303 0.9489756102531766 1.023946432092988 1.0888734297768068 1.0402288820209495 1.0307709962820388 1.0178728507732573 1.0322301238301168 1.0 14.91987361616602 -6.858169765401808 20.38043500150566 1.0198674595015567 0.9866197926438851 0.2691353201285316 0.03130961945687543 5.111586437085528 1066.8778659001769 0.004864267451078638 0.009192636354472985 1.386213852947882e-07 6.858169765401808 -0.033247666857671554 APS(ph)PPSRR ddPTM_A549_MK2206_60min_R1 2 APSPPSRR 8 1 Q7Z2K8 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 APS(1)PPSRR;APS(1)PPSRR 66.19 0.0035954 34408000.0 2020.78 1752.29 1819.79 2031.4 2187.94 1791.59 1645.62 1649.13 2987.0699999999997 2941.49 2601.7 True False 2361.83826067241 1841.4740763642674 2077.8635859771503 2529.0930911930113 1866.096924346593 1981.174864638807 1944.6078527496948 1882.8992277488103 2310.5034143706102 2277.005366046472 1955.62608673288 1.2077146427404017 0.9416289181541253 1.0625055577206395 1.2932395964395118 0.954219693123517 1.013064244785469 0.9943658790103417 0.9628114702102543 1.1814648158179346 1.1643357498112006 1.0 10.933414839827844 -4.741643451707157 6.354582045397781 1.0659822908636145 7.422327959388546 0.13649099347034055 0.10684164355186845 3913.4242582204247 2032.0487973164782 0.014589477635878687 348341.49576585233 1.8128277822519e-05 4.741643451707157 6.356345668524931 APS(ph)PPSRR ddPTM_A549_PD325901_60min_R1 2 APSPPSRR 8 1 Q7Z2K8 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 APS(1)PPSRR;APS(1)PPSRR 77.66199999999999 0.0018507999999999999 41628000.0 3482.6000000000004 3716.3999999999996 3692.3999999999996 3764.3 4368.8 3833.0 4024.7 4016.2999999999997 3758.3 4223.0 4684.9 True False 3836.1509882453856 4029.594070706934 3942.988468204953 3996.812261654422 4061.950559541799 3801.785318827099 4177.862160900345 3936.1917457736026 3600.351720840305 3956.359059298312 4108.687000027972 0.9336683442226844 0.9807498285168718 0.9596711718799968 0.9727711703586113 0.9886249693671348 0.9253041954281784 1.0168363179945081 0.9580169396565873 0.8762779254822267 0.9629253966708529 1.0 12.004461714776546 -8.531045218425096 24.965605640143313 0.9402899928243459 0.9691018826235702 0.05915449335478151 0.035988341716223976 408.1499830945807 1247743.0322570556 0.008096202274130552 0.009187605281035769 2.944115078722526e-09 8.531045218425096 0.028811889799224333 APS(ph)PPVEHPR ddPTM_A549_MK2206_60min_R1 4 APSPPVEHPR 10 0 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR 138.42 9.243e-08 618668000.0 5965.57 7373.780000000001 7307.4400000000005 6679.11 9521.2 7077.91 6886.07 6002.24 10409.67 9376.300000000001 10787.960000000001 True False 6972.412371816575 7749.073906039127 8343.744873151778 8315.492249836647 8120.644092657378 7826.889738263585 8137.179784266166 6853.075901089072 8051.8963658271505 7258.187317876832 8109.0117994506845 0.8598350260495238 0.9556126070212476 1.0289471861068193 1.0254630842194543 1.0014344896140712 0.9652088234467472 1.0034736643023987 0.8451185015606105 0.99295654821622 0.8950766748629606 1.0 12.985310396527845 -4.690752470681242 0.005440130407252827 1.9135925949503523 4.3015929464262914e-08 0.0 0.06631268922098896 50281.968675586126 34.441324872876926 5765.939771538807 6361.391405244358 2.038203435678735e-05 4.690752470681242 -1.9135925519344228 APS(ph)PPVEHPR ddPTM_A549_PD325901_60min_R1 3 APSPPVEHPR 10 0 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR 111.26 5.0818e-05 616499000.0 14925.0 15969.100000000002 14919.900000000001 14278.699999999999 17823.9 15705.1 15282.599999999999 16814.6 15970.0 16414.699999999997 19049.7 True False 16440.175012795706 17314.872100561326 15932.454134647127 15160.662869719461 16572.010753116898 15577.202872609305 15864.187705959599 16479.219612201483 15298.836437170972 15378.273040649767 16706.707665997765 0.9840463687681255 1.0364024107395693 0.9536561274172269 0.9074596367407037 0.9919375549286106 0.9323921375791306 0.9495699585530607 0.9863834300363514 0.9157301811360383 0.9204849541928787 1.0 14.028139833958482 -5.7776558147817685 24.625871436711577 0.9569180366925429 1.0102243867243044 0.32185047927324706 0.032273417350265954 179.06038666877146 271918.00906905474 0.004906041454579932 0.015320438582685107 1.6685690559523764e-06 5.7776558147817685 0.05330635003176143 APS(ph)PRPGPGPLR ddPTM_A549_MK2206_60min_R1 2 APSPRPGPGPLR 12 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 APS(1)PRPGPGPLR;APS(1)PRPGPGPLR 72.175 0.00057972 62974000.0 3672.7 3847.6000000000004 3370.7 2859.5 4051.4 3046.1000000000004 3037.3999999999996 3029.8 4938.1 4992.0 5072.0 True False 4292.561971105986 4043.426405571655 3848.7159448360444 3560.077628367831 3455.444426857127 3368.4362801624657 3589.2562632575723 3459.283428373352 3819.6282345253085 3864.303732905429 3812.4824199212703 1.125923085881306 1.0605757509709786 1.0095039192116517 0.9337951592289174 0.9063502585091221 0.8835283443043458 0.9414486069503482 0.9073572143697355 1.0018743206700966 1.0135925382143083 1.0 11.896514969700153 -5.6400897862715285 2.046868245073043 0.9714063796174409 1.1240522349051318 0.5862617733457653 0.04518881711848419 0.27288611458210904 1.9713324201206492 0.0077233844576922416 0.05804866595351197 2.290394086528571e-06 5.6400897862715285 0.15264585528769092 APS(ph)PRPGPGPLR ddPTM_A549_PD325901_60min_R1 2 APSPRPGPGPLR 12 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 APS(1)PRPGPGPLR;APS(1)PRPGPGPLR 92.495 7.443699999999999e-05 81305000.0 6375.1 7105.1 6104.4 5827.9 7886.299999999999 7186.3 7526.7 7003.5 7322.8 7327.700000000001 7391.799999999999 True False 7022.295458899426 7703.871712350617 6518.681292739226 6187.876146878782 7332.393494258034 7127.777155410168 7813.132687268274 6863.809698360534 7015.048181722953 6865.027771446891 6482.655460480855 1.0832436648389367 1.188382100408461 1.0055572646854347 0.9545279993053636 1.1310786974500335 1.0995150365250879 1.2052364551684396 1.0587960042305573 1.0821257159951867 1.0589839014732512 1.0 12.662369183407531 -10.340096807924828 0.7687573878819937 1.0010677853722618 1.0905301037905333 0.08073510370035963 0.07021685949880369 0.8764282161587619 0.9615101871772783 0.043499650194509146 0.01396545076556895 4.569863121343017e-11 10.340096807924828 0.08946231841827146 APS(ph)PSGLMSPSR ddPTM_A549_MK2206_60min_R1 1 APSPSGLMSPSR 12 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 APS(0.743)PS(0.253)GLMS(0.004)PSR 47.138999999999996 0.012799 5574400.0 3917.6 3887.4 3730.4 3296.2 4454.8 3435.7 3052.8 3395.3 5143.1 5223.6 5759.7 True False 4578.7951038758465 4085.2520555721126 4259.426813604407 4103.769147972042 3799.504821237875 3799.2634935669175 3607.454243916742 3876.5941726701594 3978.1960618430385 4043.585132052243 4329.407530366827 1.0576031643498087 0.9436053378938833 0.9838359599387284 0.9478823878759073 0.8776038741069835 0.8775481326067286 0.8332443223729242 0.8954098558473425 0.9188777064620594 0.9339811749506597 1.0 12.07995389356686 -2.477154266835331 1.0813254703985349 0.935848607413235 65.50910440379418 0.3685610071240063 0.04829841628917379 929.5597396583588 2.6312473134240637 0.009078144795728152 148238.98025342458 0.003333079965611681 2.477154266835331 64.57325579638095 APS(ph)PSGLMSPSR ddPTM_A549_PD325901_60min_R1 2 APSPSGLMSPSR 12 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 APS(0.5)PS(0.5)GLMSPSR;APS(0.988)PS(0.012)GLMSPSR 106.11 0.00015187 15183200.0 4768.799999999999 5159.6 5232.0 5429.9 5353.3 4618.7 4933.0 5369.3 5321.1 5785.7 6294.9 True False 5252.925065394988 5594.417599617776 5587.074982571854 5765.292590802362 4977.302675882419 4581.0868385251015 5120.728014441174 5262.205099365636 5097.472671623702 5420.389914606259 5520.667206658857 0.9515018509101715 1.0133589637263343 1.0120289402398497 1.0443108368945777 0.9015762931478556 0.8298067365842189 0.9275560041483231 0.9531828133053425 0.9233435888827511 0.9818360193978642 1.0 12.430626920790356 -6.758005106006975 24.98497152368829 0.9455210715631692 1.0063564010039614 0.3343674890428907 0.047684333283222184 109.31495081388002 795273.7665289738 0.007979523956280595 0.016101331313693533 1.745801627382974e-07 6.758005106006975 0.060835329440792174 APS(ph)PSINR ddPTM_A549_MK2206_60min_R1 2 APSPSINR 8 0 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 APS(0.995)PS(0.005)INR;APS(0.999)PS(0.001)INR 129.28 0.0010674 52917000.0 7164.4 7586.1 7435.6 6714.0 9156.3 7880.9 8264.599999999999 7092.5 11529.0 12147.9 12561.1 True False 8373.57556723711 7972.200087147088 8490.079888279253 8358.930301402908 7809.420399277262 8714.851607081968 9766.170841284822 8097.883594870288 8917.699908029866 9403.680952917037 9441.832201276238 0.8868591803723505 0.8443488421738207 0.8991983449072164 0.8853080761457554 0.8271085773184652 0.9230042878652296 1.0343512395787697 0.8576601894890389 0.9444882855283612 0.9959593384476749 1.0 13.204851128487519 -7.519848037319362 24.99008161761655 0.9672138967284422 0.8703718548246131 0.5126190102556376 0.045529129013743105 77.32881752912677 637626.0706791746 0.006993665205942823 0.01048734107406461 3.021008607553417e-08 7.519848037319362 -0.09684204190382906 APS(ph)PSINR ddPTM_A549_PD325901_60min_R1 2 APSPSINR 8 0 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 APS(0.985)PS(0.015)INR;APS(0.777)PS(0.223)INR 123.35 0.0011404000000000002 66015000.0 14796.7 15043.6 14320.0 14149.599999999999 17043.7 15067.6 13963.1 15024.2 16262.4 15818.8 16975.8 True False 16298.850091245191 16311.37696751879 15291.841313155368 15023.588655926837 15846.609309573008 14944.89446124685 14494.473411401503 14724.530544743102 15578.947882019369 14819.9982683467 14887.884218462483 1.0947727596533139 1.0956141737918026 1.0271332775541024 1.0091150922100849 1.0643963290580678 1.0038293045504525 0.9735751029973009 0.9890277442165485 1.0464178558495167 0.9954401882013835 1.0 13.861851120412489 -5.788780325013531 4.663999495440083 1.0176607027847002 1.096449404229066 0.617686315795734 0.02498010268556551 0.1008118737993581 5.177521466304197 0.003770371839844862 0.013485032146983678 1.6263711993764998e-06 5.788780325013531 0.07878870144436578 APS(ph)PSSR ddPTM_A549_MK2206_60min_R1 4 APSPSSR 7 0 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 APS(0.925)PS(0.073)S(0.002)R;APS(0.833)PS(0.154)S(0.013)R;APS(0.904)PS(0.094)S(0.002)R;APS(0.496)PS(0.496)S(0.008)R 95.741 0.011857 2235030000.0 12289.8 11904.8 8771.699999999999 5933.469999999999 7916.7 6531.6 5918.39 5839.07 8512.4 16078.899999999998 17196.2 True False 14364.01778323804 12510.70347048795 10015.658959064387 7387.170416363588 6752.163917189075 7222.76957667482 6993.684854118975 6666.776053901903 6584.354991509538 12446.665322718965 12925.908949024082 1.1112578496325038 0.9678780439987951 0.7748514242644869 0.5715010407002229 0.5223743988772929 0.5587823343920542 0.541059424269502 0.5157684523536158 0.5093920294097897 0.9629237968335449 1.0 13.657978113872394 -5.701026510099353 2.4440024283971797 0.6860809812913247 1.0935883851242678 0.4361849390247684 0.1692560078373515 0.2980609379489 3.3546126065462905 0.03062119992336745 0.17221441293965753 1.9905518284924643e-06 5.701026510099353 0.40750740383294315 APS(ph)PSSR ddPTM_A549_PD325901_60min_R1 6 APSPSSR 7 0 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 APS(0.976)PS(0.021)S(0.003)R;APS(0.957)PS(0.039)S(0.004)R;APS(0.914)PS(0.084)S(0.002)R;APS(0.801)PS(0.171)S(0.027)R;APS(1)PSSR;APS(0.908)PS(0.091)SR 121.53 0.0064931 2828548000.0 16213.5 16720.4 14488.499999999998 14980.4 14130.8 12428.7 9411.8 10838.800000000001 13290.699999999999 17638.9 19888.2 True False 17859.48258425215 18129.486788248916 15471.776736428183 15905.705285043136 13138.301356613543 12327.484787922358 9769.971199334572 10622.611631125896 12732.138098654235 16525.17684372649 17442.077481687207 1.0239309281250002 1.0394109765469988 0.8870374961166362 0.9119157566948581 0.7532532389222393 0.706767000712228 0.5601380460322036 0.6090221558916242 0.7299668352019401 0.9474316841601358 1.0 14.09028426565212 -6.027411475772031 1.551929667140805 0.8079375675148561 1.0415204120428063 0.352465745338699 0.1299160066975789 0.5385806511246071 2.336717657853124 0.024195096622830915 0.12193770488200072 9.388333838668192e-07 6.027411475772031 0.2335828445279502 APS(ph)PTAEQPPGGGDSAR ddPTM_A549_MK2206_60min_R1 2 APSPTAEQPPGGGDSAR 17 0 Q15742-2;Q15742-3;Q15742 Q15742-2 NAB2 NGFI-A-binding protein 2 1 APS(0.975)PT(0.025)AEQPPGGGDSAR;APS(0.74)PT(0.26)AEQPPGGGDSAR 140.22 1.5749000000000002e-13 51480000.0 992.65 920.41 850.12 911.3399999999999 1423.77 828.21 957.71 866.35 1358.06 1541.3600000000001 1870.98 True False 1160.1850520375624 967.2549376110325 970.6797991586368 1134.6183409116074 1214.335319056714 915.8506324786956 1131.7135102009645 989.1577655856013 1050.461578376185 1193.165705478989 1406.364029578923 0.8249535878594189 0.6877699637274117 0.6902052233583266 0.8067742896206763 0.863457322227088 0.6512187550423263 0.8047087997122686 0.703344045198428 0.7469343329910832 0.8484045953850459 1.0 10.457754361072489 -10.60803920030554 0.7390699104167547 1.0127972470262547 0.7500514957250973 0.36860359315965174 0.07700572454539209 0.3436370046115685 0.31093401272842963 0.053549742305939986 0.012192222577704697 2.465816757540464e-11 10.60803920030554 -0.2627457513011574 APS(ph)PTAEQPPGGGDSAR ddPTM_A549_PD325901_60min_R1 2 APSPTAEQPPGGGDSAR 17 0 Q15742-2;Q15742-3;Q15742 Q15742-2 NAB2 NGFI-A-binding protein 2 1 APS(0.952)PT(0.048)AEQPPGGGDSAR;APS(0.846)PT(0.154)AEQPPGGGDSAR 134.76 2.6841e-12 64280000.0 1269.0700000000002 1572.46 1688.0900000000001 1687.9099999999999 1741.79 1716.54 1543.83 1463.8400000000001 1864.49 1658.8 1878.81 True False 1397.9050521600443 1704.9767227488508 1802.6539387098085 1792.1683671782562 1619.4526792492927 1702.561067357024 1602.5812954661912 1434.6425628397358 1786.1319692386296 1554.06308490742 1647.7282807578722 0.8483832367780192 1.0347438607806423 1.0940237900636616 1.0876601367513998 0.9828396454447125 1.033277808750076 0.9726004670679588 0.8706790916885109 1.083996669898206 0.9431549503979073 1.0 10.686262638637425 APS(ph)PTGPALISGAS(ph)PVHCAADGTVELK ddPTM_A549_PD325901_60min_R1 1 APSPTGPALISGASPVHCAADGTVELK 27 0 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 2 APS(0.816)PT(0.187)GPALIS(0.206)GAS(0.79)PVHCAADGTVELK 66.933 0.000124 5272300.0 2332.8 2854.2 2186.6 2613.9 2508.8 2491.2 2325.1 2752.7 2622.5 2747.8 2690.4 True False 2569.6241386834063 3094.73345081577 2334.9958250939635 2775.3546664023843 2332.590542890144 2470.9124931547267 2413.5829528435384 2697.795239048624 2512.2854449894103 2574.3034390575176 2359.4978558507673 1.0890555091252132 1.3116068078391612 0.9896155740527388 1.176248013754465 0.9885961697765896 1.0472196391396111 1.0229222912233882 1.1433768555283879 1.0647542818315265 1.0910386854872973 1.0 11.204264145115495 -2.0000000000000155 0.20035845852019496 1.0141663376986276 1.7933167096806006 0.11453799088330263 0.08718778964034676 48.669107547832674 0.5413544374315351 0.061694372953031026 12.064277441861497 0.009999999999999643 2.0000000000000155 0.779150371981973 APS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 APSPTK 6 0 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;H3BTV0;P59025;Q15287-2;Q15287-3;H3BMS0;Q96FF9;B5MBX0 H3BMM9;Q15287-2;Q96FF9 RNPS1;RTP1;CDCA5 RNA-binding protein with serine-rich domain 1;Receptor-transporting protein 1;Sororin 1 APS(0.998)PT(0.002)K;APS(0.933)PT(0.067)K 106.38 0.027629 1527800000.0 19826.6 16950.6 15964.099999999999 13294.099999999999 14313.3 10184.5 8993.4 11163.2 14093.2 15834.5 22184.0 True False 21839.3818364285 18379.086550135882 17047.51982593182 14115.246363908309 13307.98318620436 10101.56080866021 9335.648758377314 10940.541218639015 13500.911814423165 14834.706967667324 19455.50863596247 1.1225294719902397 0.9446726320052677 0.8762310019703309 0.7255141270281174 0.6840213450706327 0.5192134010820983 0.4798460391377723 0.5623364273507612 0.6939377462210086 0.7624939160031088 1.0 14.247891077515753 -5.569666663691957 1.5676854716580808 0.762587391850174 1.1474087137947875 0.4033268066457735 0.1515646171576452 0.7273938531087065 2.503828339518942 0.02954685651933573 0.35710448252079735 2.693601444676559e-06 5.569666663691957 0.3848213219446135 APS(ph)PTKPLR ddPTM_A549_MK2206_60min_R1 4 APSPTKPLR 9 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 APS(0.514)PT(0.486)KPLR;APS(0.986)PT(0.014)KPLR;APS(0.869)PT(0.131)KPLR;APS(0.981)PT(0.019)KPLR 100.88 0.00062862 341135000.0 10922.9 11724.699999999999 11940.8 9764.5 12625.2 10494.900000000001 10484.5 11305.0 14641.3 14215.0 14311.6 True False 12766.418480734495 12321.437149757252 13634.184992463946 12156.802938345056 10768.049804501306 11605.463352049203 12389.397936433796 12907.51837011049 11325.06892735169 11003.821627253745 10757.634739934001 1.1867309858870352 1.1453667509288241 1.2673961630107915 1.1300628095520966 1.00096815562334 1.0788118050678863 1.151684197869485 1.1998472417171582 1.052747114132002 1.0228848527832852 1.0 13.393073289779174 -2.0000033015052447 0.043797675208571425 0.6661512389271805 1.8976516824444323 0.3939020786794879 0.0655105659191942 336.1003862512399 1.0868451388304443 7.807630117624664 29.214075246140755 0.00999992398032134 2.0000033015052447 1.2315004435172519 APS(ph)PTKPLR ddPTM_A549_PD325901_60min_R1 4 APSPTKPLR 9 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 APS(0.638)PT(0.362)KPLR;APS(0.563)PT(0.437)KPLR;APS(0.958)PT(0.042)KPLR;APS(0.526)PT(0.474)KPLR 86.243 0.00033712 565790000.0 17518.1 20463.8 19043.699999999997 19059.2 21228.6 17960.500000000004 18509.5 18985.199999999997 19169.8 21023.8 20982.8 True False 19296.524615856375 22188.356243712336 20336.120001071016 20236.44349741622 19737.57637069424 17814.235642784795 19213.889151287043 18606.52529239872 18364.15997077522 19696.35368005585 18402.048620928286 1.0486074139544888 1.2057546798609127 1.1051008732768561 1.09968427506499 1.0725749495220378 0.9680571989427861 1.0441168560676155 1.0111116254327188 0.9979410634688806 1.0703348353104325 1.0 14.167578763806427 -6.938366698682792 2.0337204062043304 1.0016718060469276 1.1246905512837069 0.510584444206543 0.0440805920930196 0.12993180416517602 1.0822755746622046 0.00525788319288215 0.011092940286312086 1.1524797449401824e-07 6.938366698682792 0.12301874523677925 APS(ph)PTKPLRR ddPTM_A549_MK2206_60min_R1 3 APSPTKPLRR 10 2 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 APS(0.988)PT(0.012)KPLRR;APS(0.857)PT(0.143)KPLRR;APS(0.973)PT(0.027)KPLRR 74.611 0.00032925 358412000.0 7968.3 8131.7 7567.6 6853.4 10735.2 7764.0 6971.86 8020.099999999999 11365.1 11733.9 12244.8 True False 9313.154233769113 8545.56879670107 8640.799473148378 8532.48330766082 9156.066300833454 8585.581326673906 8238.556716782423 9156.973735526146 8790.922996335354 9083.20384045253 9204.078220712134 1.011850835079989 0.9284546036854396 0.9388011776892337 0.9270328981407383 0.9947836253965511 0.9328018646509967 0.8950985116839862 0.9948822158986016 0.9551117217314551 0.9868673019327892 1.0 13.16805752899701 -10.437454938141311 0.5579936614974617 1.0046564862651732 0.9495447262258406 0.17577634258164088 0.033459529567352035 1.2390685774547037 0.6212222860368041 0.03405609948546959 0.007439126140246005 3.652120192367342e-11 10.437454938141311 -0.0551117600393326 APS(ph)PTKPLRR ddPTM_A549_PD325901_60min_R1 3 APSPTKPLRR 10 2 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 APS(0.753)PT(0.247)KPLRR;APS(0.997)PT(0.003)KPLRR;APS(0.998)PT(0.002)KPLRR 96.745 0.00010886 465729000.0 8699.7 8200.5 7844.1 8840.5 9711.099999999999 10061.8 8737.1 9901.7 9775.5 9706.300000000001 10162.2 True False 9582.887139619357 8891.584914657251 8376.447796405173 9386.557606767765 9029.025837476276 9979.860036779159 9069.595121624574 9704.202825766622 9364.669730216963 9093.442561512482 8912.313823493414 1.0752412145046184 0.9976741271406399 0.9398735235651526 1.0532121952465603 1.0130955906955612 1.1197832834916144 1.0176476391256057 1.0888533570469365 1.050756281217467 1.0203234246017685 1.0 13.121584318913904 APS(ph)PTKR ddPTM_A549_MK2206_60min_R1 3 APSPTKR 7 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;H3BTV0;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 APS(0.871)PT(0.129)KR;APS(0.902)PT(0.098)KR;APS(0.866)PT(0.134)KR 54.43600000000001 0.024018 854533000.0 8507.7 8626.9 6191.700000000001 4063.2699999999995 5816.1 4478.139999999999 4035.3999999999996 4801.1 7080.9 10548.0 11829.5 True False 9943.591766705258 9065.97236153085 7069.776163895133 5058.771332407123 4960.559394541084 4952.013802451246 4768.579944936328 5481.670627752096 5477.087455873771 8165.199474095846 8891.908672409045 1.118274167340417 1.0195755147218182 0.7950797094702673 0.5689184986913021 0.5578734079819493 0.5569123553660633 0.5362830546981313 0.6164785120613449 0.615963080330411 0.9182729799544472 1.0 13.118277415377507 -5.740783076744439 3.1570498966397778 0.7284110464758821 1.0964657801034083 0.4741409925677399 0.15294765904163654 0.22923241767370167 4.56975704407381 0.028208548486611872 0.12580575068882538 1.8164227107698707e-06 5.740783076744439 0.3680547336275263 APS(ph)PTKR ddPTM_A549_PD325901_60min_R1 2 APSPTKR 7 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;H3BTV0;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 APS(0.805)PT(0.195)KR;APS(0.767)PT(0.233)KR 54.722 0.017472 1462050000.0 9629.900000000001 10325.2 6813.200000000001 7250.1 7949.6 5911.7 4399.2 5948.3 5738.799999999999 9741.2 10617.6 True False 10607.520358842316 11195.340840292552 7275.584723099877 7697.922210828227 7391.24752063118 5863.5570752178855 4566.6139633346065 5829.656490148925 5497.6181932145755 9126.13896955641 9311.70251051186 1.1391601425053715 1.202287210921341 0.7813377537444484 0.8266933143684674 0.793758983632402 0.6296976378485667 0.49041665132443996 0.6260569947942282 0.5903988220208266 0.9800720071602407 1.0 13.184829252544775 -5.776481215562245 8.333021788211864 0.7570766277689597 1.171384048224712 0.5402802181452138 0.1506828239407096 0.10046647238030929 41.90336233545501 0.025578916805396725 0.08421138712570848 1.6730880005180373e-06 5.776481215562245 0.4143074204557523 APS(ph)PTKRK ddPTM_A549_PD325901_60min_R1 1 APSPTKRK 8 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;H3BTV0;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 APS(0.864)PT(0.136)KRK 42.743 0.025001 8286000.0 2478.0 1998.4 1889.3 1751.8 1896.8 3034.5 2166.2 2198.0 2381.8 2213.0 3356.2 True False 2729.5647357928174 2166.812181385411 2017.5192592838303 1860.0047073735382 1763.5753116047613 3009.78803808527 2248.635926390124 2154.1591657023578 2281.7012289326135 2073.270802327056 2943.4086767047097 0.9273481991799721 0.7361574349272026 0.6854363361945858 0.6319220032523328 0.5991608727535486 1.0225518671280385 0.7639564101943133 0.731858672141323 0.7751900872586575 0.7043774854425531 1.0 11.523272151412765 -10.820402543271221 0.4405027335223485 1.07480848471204 0.7462045383360482 0.0 0.14561956729967115 1.7515071937786055 0.4139511426341783 0.2607940599354473 0.03206350591764082 1.5121589934139736e-11 10.820402543271221 -0.3286039463759919 APS(ph)PTSSAGEEGTK ddPTM_A549_MK2206_60min_R1 2 APSPTSSAGEEGTK 14 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 APS(0.837)PT(0.146)S(0.017)SAGEEGTK;APS(0.738)PT(0.261)S(0.001)SAGEEGTK 151.22 1.4149e-13 33114000.0 7649.200000000001 8051.5 6783.8 6881.4 10552.7 8266.9 7751.5 8895.2 11165.099999999999 10534.900000000001 10342.2 True False 8940.197955015088 8461.286959262961 7745.84484723611 8567.34330891778 9000.411809077159 9141.697870875902 9159.847212958799 10156.121840407497 8636.222677000977 8155.058773194187 7773.946309800816 1.1500205428154229 1.0884159244315332 0.9963851740872871 1.1020584613655882 1.1577661396670704 1.175940443446429 1.1782750803682218 1.3064306641278716 1.1109187448481688 1.0490243240955874 1.0 12.924431428504416 -10.03898431811913 1.0973142527772448 1.0148302168246541 1.13851028857618 0.2673848812201908 0.07286936775043189 0.41294675455730656 1.0001358750276346 0.02731905781123352 0.014813992398010355 9.141462496579321e-11 10.03898431811913 0.12368007175152584 APS(ph)PTSSAGEEGTK ddPTM_A549_PD325901_60min_R1 2 APSPTSSAGEEGTK 14 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 APS(0.8)PT(0.099)S(0.099)S(0.002)AGEEGTK;APS(0.981)PT(0.018)S(0.001)SAGEEGTK 178.67 3.2400999999999997e-23 40051000.0 9655.8 9352.9 10389.8 9939.3 11551.6 10092.5 10334.6 9616.8 11526.6 10219.6 11383.0 True False 10636.049707775734 10141.101707005404 11094.914306942863 10553.227987211905 10740.255466856584 10010.310026157716 10727.888858310114 9424.985379766342 11042.177086831247 9574.332711912155 9982.963162782225 1.0654201096752816 1.0158408422073257 1.1113848790213046 1.0571238033368389 1.0758584692466504 1.0027393533292244 1.0746196979174547 0.9441069977002322 1.1061021569224965 0.9590672183992928 1.0 13.285252387372958 APS(ph)PYRR ddPTM_A549_PD325901_60min_R1 2 APSPYRR 7 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 APS(1)PYRR;APS(1)PYRR 68.37100000000001 0.021135 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 APS(ph)QHIFFVQHIEAVR ddPTM_A549_MK2206_60min_R1 2 APSQHIFFVQHIEAVR 16 0 Q8N3E9;F5GXC1;K7EQF2 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 APS(1)QHIFFVQHIEAVR;APS(1)QHIFFVQHIEAVR 90.316 1.2794000000000002e-05 29436000.0 276.29999999999995 424.75 337.78999999999996 457.62 412.45000000000005 436.12 353.98 232.7 574.53 515.0 264.04 True False 322.93268511356325 446.36796074606497 385.6937013101633 569.7369205433423 351.77915136921104 482.2699289269737 418.2935840086637 265.6859376138623 444.39987233588334 398.6611423169661 198.47158086672164 1.627097863096179 2.2490270838615007 1.9433195403888366 2.8706221719770255 1.7724409199191045 2.42991932054408 2.10757420373226 1.3386598547440234 2.2391108610875046 2.008656053305065 1.0 7.6327886325187215 -11.246263428736306 0.49469179843388333 0.517158977048189 2.123185031901816 0.004348112002659388 0.4933953061082003 1.4470365550785802 0.3429110510524832 1.2124280588739969 0.08680327343133507 5.672004559191732e-12 11.246263428736306 1.6060260548536271 APS(ph)QHIFFVQHIEAVR ddPTM_A549_PD325901_60min_R1 2 APSQHIFFVQHIEAVR 16 0 Q8N3E9;F5GXC1;K7EQF2 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 APS(1)QHIFFVQHIEAVR;APS(1)QHIFFVQHIEAVR 109.85 6.2518e-07 37479000.0 910.95 1024.01 1207.3600000000001 1422.0500000000002 1587.8 1423.24 1465.56 1405.62 1396.49 1753.8600000000001 1446.76 True False 1003.4289733940534 1110.3069164634073 1289.298710045481 1509.8867987901262 1476.2784056126318 1411.6496053137184 1521.3326877852037 1377.5838064124412 1337.8003817247893 1643.1209802843794 1268.8176917672677 0.790837785368859 0.875072064070072 1.0161418132889417 1.189995070676455 1.1635071099587233 1.112570871665186 1.1990159797237865 1.0857224133544978 1.0543676923841119 1.2950016310032413 1.0 10.309269077184014 -5.720886112815324 2.8736003287039207 1.0685845008502495 0.8071531267189569 0.5367294338806858 0.09547340011982393 0.14630918640021018 2.357270707787946 0.011593409319783957 0.05611330808617747 1.9015768744316187e-06 5.720886112815324 -0.2614313741312926 APS(ph)RDEGSLLLGSR ddPTM_A549_MK2206_60min_R1 4 APSRDEGSLLLGSR 14 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 APS(0.994)RDEGS(0.006)LLLGSR;APS(0.997)RDEGS(0.003)LLLGSR;APS(0.997)RDEGS(0.003)LLLGSR;APS(0.998)RDEGS(0.002)LLLGSR 93.152 1.6352000000000002e-05 26748000.0 3127.47 2894.84 2347.39 2459.31 3016.94 2306.04 2197.0 2263.79 3151.2699999999995 3047.8099999999995 3340.62 True False 3655.310476699661 3042.174991138645 2680.2851994388943 3061.8410604026194 2573.1521225162523 2550.0636221745367 2596.1664615713707 2584.6891650661137 2437.5123765441313 2359.307604204024 2511.051857578349 1.4556889638371833 1.2115142034830415 1.0673953990037282 1.2193460087898982 1.024730777562592 1.015536025063939 1.0338959961086212 1.0293252834526405 0.970713674903895 0.9395694465981014 1.0 11.294076107735293 -2.0000000000000004 0.4378464787926586 0.9896488380566624 10.340166451599977 0.8557672004260889 0.05459075494479261 16.710943712877764 0.1823785523003179 0.010313177196232075 140.0003658708962 0.00999999999999999 2.0000000000000004 9.350517613543314 APS(ph)RDEGSLLLGSR ddPTM_A549_PD325901_60min_R1 2 APSRDEGSLLLGSR 14 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 APS(0.993)RDEGS(0.007)LLLGSR;APS(0.986)RDEGS(0.014)LLLGSR 59.251999999999995 0.0023785 10463800.0 647.86 789.91 849.1800000000001 723.42 1025.96 1017.28 1045.52 1058.24 1771.26 2945.21 2967.6000000000004 True False 713.6302702706753 856.4784878893861 906.8104613341678 768.1040103939748 953.9001089698551 1008.9956089581088 1085.307835730496 1037.13257302678 1696.820101922572 2759.248937967317 2602.6040131663467 0.2741985590817819 0.32908520987308715 0.3484242922652439 0.2951290348082934 0.366517573992877 0.3876869488610976 0.4170084385638454 0.3984980303496101 0.6519701396518668 1.0601877673316868 1.0 11.345740106700006 -9.366952644325474 0.478945134848249 1.0078432147961882 0.2986981144760464 0.9643537748954909 0.05026269168987294 0.10118126139664076 0.05421670142502016 0.027782226330979275 0.01593278101426282 4.2958326617249243e-10 9.366952644325474 -0.7091451003201419 down APS(ph)RNLAPTPR ddPTM_A549_MK2206_60min_R1 4 APSRNLAPTPR 11 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 APS(1)RNLAPTPR;APS(1)RNLAPTPR;APS(1)RNLAPTPR;APS(1)RNLAPTPR 85.536 0.00011733 121497000.0 10179.8 11043.900000000001 9775.3 9393.5 11664.5 8830.900000000001 8775.8 7922.900000000001 12926.699999999999 16871.9 17619.8 True False 11897.901367785198 11605.987337689161 11161.584530084487 11694.907921690237 9948.667501869713 9765.379976523009 10370.24926420484 9045.99533786363 9998.82308969812 13060.526071956556 13244.317378258822 0.8983400977173931 0.8762993974110694 0.8427451722356608 0.883013264306697 0.7511649878008001 0.7373260318084301 0.7829961309465521 0.6830095564391307 0.7549519393209094 0.9861230064900159 1.0 13.69308586762245 -10.768661198045962 1.0558078669505666 0.9982087049551542 0.7980742721102219 0.5586636734064264 0.06549550014194538 0.32835193223110515 0.6589901070755706 0.047568277649460484 0.0125091962491945 1.7034869149413726e-11 10.768661198045962 -0.20013443284493238 APS(ph)RNLAPTPR ddPTM_A549_PD325901_60min_R1 4 APSRNLAPTPR 11 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 APS(1)RNLAPTPR;APS(1)RNLAPTPR;APS(1)RNLAPTPR;APS(1)RNLAPTPR 88.803 0.00025227 259595900.0 13154.7 14243.399999999998 13737.300000000001 14158.8 15351.099999999999 14442.099999999999 14125.6 16088.2 14432.7 14890.300000000001 15881.6 True False 14490.155460021695 15443.741305216645 14669.59578709562 15033.35691903211 14272.891694419995 14324.488325862994 14663.157437824913 15767.30823005125 13826.143810066216 13950.12391680551 13928.263881757199 1.0403418245830656 1.1088059097906933 1.0532250043244367 1.079341764821266 1.0247430559607777 1.0284475112957012 1.0527627536573496 1.1320368686224256 0.9926681406557255 1.0015694730681362 1.0 13.765727820886033 -8.830869452678105 24.999995561262917 0.9965375386652615 1.0635488284860215 0.480201335694724 0.030954541777098204 28.244794512968976 10169.798112739072 0.005216340220847364 0.005553172370691428 1.476150191902986e-09 8.830869452678105 0.06701128982075999 APS(ph)RQDVYGPQPQVR ddPTM_A549_MK2206_60min_R1 10 APSRQDVYGPQPQVR 15 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(0.999)RQDVY(0.001)GPQPQVR;APS(1)RQDVYGPQPQVR 183.88 7.964199999999999e-34 1513221900.0 19672.57 21634.809999999998 21691.700000000004 20747.6 28187.300000000003 24194.25 22429.260000000006 20320.200000000004 34332.2 33568.5 36725.399999999994 True False 22992.81886784123 22735.92941925503 24767.909235648392 25830.76293139516 24040.985509490536 26754.469476156635 26504.366212956 23200.65057800259 26556.011517257626 25985.35253566423 27605.469610523785 0.8329080864132767 0.8236023418557464 0.8972102117837671 0.9357117736387983 0.8708776140625989 0.9691727709626526 0.9601128539705036 0.8404367288560096 0.9619836898965094 0.9413117364885569 1.0 14.752666523298794 -2.000000000264943 0.12430265640256939 1.031921478420362 0.3776827371006051 0.427549265305576 0.044672877834587336 39.10038952840268 0.31945454457154393 0.1323889238827811 4.481832313677322 0.009999999993899458 2.000000000264943 -0.654238741319757 APS(ph)RQDVYGPQPQVR ddPTM_A549_PD325901_60min_R1 6 APSRQDVYGPQPQVR 15 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR 186.75 1.7214999999999997e-33 2440604000.0 34962.299999999996 33871.6 36182.0 38437.9 38135.4 38347.3 37624.2 40296.2 44766.4 42297.0 45560.1 True False 38511.64695811507 36726.078604390554 38637.52810004107 40812.12178419533 35456.90106398791 38035.01230280679 39056.00951975223 39492.46067924266 42885.023887349475 39626.3602015488 39956.496529269476 0.9638394329669017 0.9191516222521529 0.9669898879081599 1.0214139208701414 0.8873876376527292 0.951910592935616 0.9774633141607496 0.9883864730310652 1.073292896336263 0.9917376057363078 1.0 15.286142469650892 -8.387065881736339 2.4988400561973108 1.0343373186007718 0.9531582450000577 0.3508427843596408 0.03794509811965919 0.19502933291147093 2.379304042947194 0.006874776406401555 0.008429655696023901 4.10141880439539e-09 8.387065881736339 -0.08117907360071408 APS(ph)SPVAKPGPVK ddPTM_A549_MK2206_60min_R1 1 APSSPVAKPGPVK 13 1 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 APS(0.568)S(0.432)PVAKPGPVK 53.528 0.0069539 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 APS(ph)TPLLTVR ddPTM_A549_PD325901_60min_R1 1 APSTPLLTVR 10 0 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;F8WF18;F8WAT3;C9IZE1 F8WAE5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed 1 APS(0.611)T(0.389)PLLTVR 106.4 0.00029379 5491700.0 1401.8 1726.9 1330.6 1567.6 1688.9 1715.6 1324.7 1565.1 1677.7 1484.4 1892.0 True False 1544.1097040493823 1872.4319235560768 1420.9025175478032 1664.4270917220915 1570.2774903886982 1701.6287224053676 1375.112183403654 1533.8828527028022 1607.192103358907 1390.6747306707105 1659.295994376171 0.9305812279923606 1.1284496135121669 0.8563285407568322 1.0030923339556723 0.9463516429321942 1.025512463220953 0.8287322985557144 0.9244178602862722 0.9685987966017763 0.8381113046642101 1.0 10.696355549815669 -9.872000787449963 1.274535504569022 0.9942310378504482 0.9581203371490369 0.0 0.09007022225117865 1.1127967127146943 3.6434123011100694 0.021003084217992612 0.013466505836470766 1.3427625264781933e-10 9.872000787449963 -0.036110700701411313 APS(ph)VANVGSHCDLSLK ddPTM_A549_MK2206_60min_R1 4 APSVANVGSHCDLSLK 16 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 APS(0.99)VANVGS(0.01)HCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK 198.98 8.240999999999998e-40 254510900.0 9954.9 10612.2 9011.3 8569.0 11918.1 10110.2 8345.1 10439.5 13084.1 11957.0 12368.8 True False 11635.043746062296 11152.315651628942 10289.237841902583 10668.405384677033 10164.963277811601 11180.054653392395 9861.296649275948 11919.331094627903 10120.572241014279 9255.905395502847 9297.285598486234 1.2514452334299262 1.1995238323586337 1.106692672060957 1.1474752788506402 1.0933259143363994 1.2025073915350852 1.0606640556337803 1.2820226902106338 1.088551290998535 0.9955492167530999 1.0 13.182593858387529 -9.475366599921559 1.057750549161452 1.0179241950990972 1.1613270138058516 0.46903674904600956 0.06651100269476397 0.27592054868420296 0.6455029574716564 0.017367458009859824 0.01292635244941617 3.346828049206873e-10 9.475366599921559 0.14340281870675442 APS(ph)VANVGSHCDLSLK ddPTM_A549_PD325901_60min_R1 6 APSVANVGSHCDLSLK 16 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(0.633)VANVGS(0.367)HCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK 227.2 1.8172999999999998e-55 372342400.0 34108.1 40337.0 40665.6 36851.600000000006 37898.100000000006 33060.1 38703.8 42563.9 27742.7 42600.399999999994 49817.100000000006 True False 37570.72920294386 43736.34055271381 43425.412158118124 39127.83963594404 35236.26819734735 32790.86950664122 40176.69428853203 41714.92962376641 26576.770796838042 39910.60347377025 43689.91251661584 0.8599405912899282 1.0010626717570175 0.9939459627345987 0.8955806359434392 0.8065080968964299 0.7505363965691262 0.9195874281792694 0.9547954486725438 0.6083045093471073 0.9134969876305367 1.0 15.41501259652474 -6.551139389798613 4.097177585585687 0.824633904409456 0.9559156447335351 0.1146054646512561 0.10873750905619438 0.33708452219421986 12.692196546699778 0.021215684607944037 0.047302241454964186 2.8109984763190296e-07 6.551139389798613 0.13128174032407902 APS(ph)VATVGSICDLNLK ddPTM_A549_MK2206_60min_R1 2 APSVATVGSICDLNLK 16 0 O75369-8;O75369;O75369-9;O75369-2;O75369-7;E7EN95;O75369-4;O75369-5;A0A0C4DGA1 O75369-8 FLNB Filamin-B 1 APS(1)VATVGSICDLNLK;APS(1)VATVGSICDLNLK 186.68 3.5439999999999996e-34 11757000.0 2623.3 3102.7 2088.9 1871.17 2966.2 2023.0 2286.73 2376.6000000000004 3217.5 3161.3 3263.0 True False 3066.048906472714 3260.6141772968026 2385.137430553894 2329.6067340000136 2529.875909301379 2237.072517241283 2702.199241087439 2713.4903280322496 2488.7413872917086 2447.1601343817956 2452.7070457813693 1.2500673130720141 1.329394059883762 0.972451004556906 0.9498104300743593 1.031462731618413 0.912083047622432 1.1017211557063833 1.1063246761163037 1.0146916614327497 0.9977384533513228 1.0 11.26015921165261 -5.76172782924123 24.99999902992297 1.0097901771709485 1.2897307577005066 0.7801503466798163 0.05735845052971777 2.246637120783464 194812.53541602896 0.007688140109451088 0.0263212850908063 1.7309007685444527e-06 5.76172782924123 0.27994058052955806 APS(ph)VATVGSICDLNLK ddPTM_A549_PD325901_60min_R1 4 APSVATVGSICDLNLK 16 0 O75369-8;O75369;O75369-9;O75369-2;O75369-7;E7EN95;O75369-4;O75369-5;A0A0C4DGA1 O75369-8 FLNB Filamin-B 1 APS(0.988)VAT(0.012)VGSICDLNLK;APS(0.996)VAT(0.004)VGSICDLNLK;APS(1)VATVGSICDLNLK;APS(0.968)VAT(0.031)VGS(0.001)ICDLNLK 164.65 8.0584e-21 20579700.0 6822.75 6503.58 7040.389999999999 7184.150000000001 6844.45 6242.65 6065.56 7291.3 6100.9400000000005 8345.61 8955.93 True False 7515.390557356914 7051.6595109159925 7518.193202704326 7627.898629111551 6363.719444070648 6191.811928144011 6296.388205001789 7145.869301585804 5844.53870839035 7818.666760329284 7854.407386317862 0.9568373764834881 0.8977965063538426 0.9571942010291941 0.9711615725966949 0.8102100045327485 0.7883232462489734 0.8016375896124137 0.909791019247829 0.7441094433898804 0.9954496088335275 1.0 12.93928671319583 -6.750946625412089 24.968533182985105 0.8619924490917741 0.9431399807033002 0.19862643655466394 0.07863360392016729 342.7549071149144 815613.1537912722 0.014031677405308283 0.02896744597516682 1.7744075413438182e-07 6.750946625412089 0.0811475316115261 APS(ph)YSGLSMVSGVK ddPTM_A549_MK2206_60min_R1 4 APSYSGLSMVSGVK 14 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 APS(0.421)Y(0.074)S(0.238)GLS(0.262)MVS(0.004)GVK;APS(0.52)Y(0.185)S(0.27)GLS(0.025)MVSGVK;APS(0.996)YS(0.004)GLSMVSGVK;APS(0.996)YS(0.004)GLSMVSGVK 151.56 1.2449e-13 34830400.0 10651.6 12002.9 13236.7 12764.1 16252.900000000001 12570.3 12941.300000000001 12914.3 19847.9 17645.9 19733.9 True False 12449.329673382665 12613.79634146897 15113.863098766213 15891.30507300223 13862.11994008644 13900.480802510183 15292.566695099496 14744.941573385031 15352.382340583408 13659.678934390198 14833.428002067096 0.8392752957474026 0.850362865529882 1.0189056161974182 1.0713171001866673 0.9345189755297765 0.9371050845814667 1.0309529727699098 0.9940346608572386 1.0349854624597898 0.9208713543819183 1.0 13.856564422391164 -5.7580952663769285 23.986126636256603 1.009302845511375 0.8448189387112159 0.5856715641205494 0.04678063570533524 18.799366946490245 134829.21857914294 0.005421273943991536 0.019379544950630156 1.7454392332246594e-06 5.7580952663769285 -0.16448390680015912 APS(ph)YSGLSMVSGVK ddPTM_A549_PD325901_60min_R1 5 APSYSGLSMVSGVK 14 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 APS(0.703)Y(0.042)S(0.161)GLS(0.092)MVS(0.002)GVK;APS(0.844)Y(0.009)S(0.14)GLS(0.007)MVSGVK;APS(0.831)YS(0.169)GLSMVSGVK;APS(1)YSGLSMVSGVK;APS(0.964)Y(0.006)S(0.029)GLSMVSGVK 193.16 5.5788999999999994e-27 66083100.0 18445.7 18737.1 19891.8 21117.4 24511.100000000002 25312.2 21863.8 24145.100000000002 23896.200000000004 23089.7 22886.800000000003 True False 20318.293884993356 20316.14117485817 21241.777167110613 22421.77383690488 22789.524894704497 25106.065835433168 22695.83887333043 23663.507039035485 22891.92581527397 21631.812401487157 20071.868691378728 1.0122771425722048 1.0121698924617 1.058285976942166 1.1170745575141932 1.1353962725201094 1.2508085929346842 1.130728743910065 1.1789389121103326 1.1404979858754514 1.0777179112764153 1.0 14.292887317440043 -5.965694302680964 3.110873883681923 1.101034542782063 1.012067972639487 0.2884381509612549 0.06267841635493664 0.3669759773828378 7.235061599632057 0.011643047522555076 0.040934526704584695 1.0821954342349734e-06 5.965694302680964 -0.08896657014257592 APSAGLEEVAQPESVDVITSQS(ph)DSPTR ddPTM_A549_PD325901_60min_R1 1 APSAGLEEVAQPESVDVITSQSDSPTR 27 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 APSAGLEEVAQPES(0.002)VDVIT(0.042)S(0.108)QS(0.395)DS(0.326)PT(0.127)R 63.848 0.00016053 4209600.0 1980.1 1873.8 1751.8 2416.1 2380.4 2049.6 2005.6 2487.6 2075.4 2310.8 2646.8 True False 2181.118294327423 2031.7117021016718 1870.68768242916 2565.3370096387775 2213.208915934192 2032.908737142715 2081.924205506432 2437.9828665155533 1988.178155397911 2164.895693636406 2321.260379447595 0.939626727634268 0.8752623015024154 0.8058930824788986 1.1051483204349817 0.9534513816415906 0.8757779847284944 0.8968938702179894 1.0502840991477809 0.85650803029303 0.932638024068459 1.0 11.1806926458057 -7.863995490755584 0.006680762979053165 1.8532999303820532 3.183964994267423e-07 0.023419922680647076 0.08331531596560232 10269.990509518866 35.40639642383557 4853.318178519982 4966.676361867202 1.3677430266871472e-08 7.863995490755584 -1.8532996119855538 APSALSS(ph)SPLLTAPHK ddPTM_A549_PD325901_60min_R1 1 APSALSSSPLLTAPHK 16 0 Q70SY1-2;Q70SY1 Q70SY1-2 CREB3L2 Cyclic AMP-responsive element-binding protein 3-like protein 2;Processed cyclic AMP-responsive element-binding protein 3-like protein 2 1 APS(0.002)ALS(0.016)S(0.522)S(0.454)PLLT(0.005)APHK 54.974 0.0040051999999999996 3286400.0 1340.2 1599.5 1439.3 1668.0 1423.8 1738.1 1505.5 1776.0 1854.2 1459.7 1847.6 True False 1476.2561173969061 1734.2954784457384 1536.9795532140045 1771.0285716971466 1323.7971998433468 1723.9454898652182 1562.7926263412098 1740.576286754952 1776.2744221541914 1367.5342928860389 1620.356912901381 0.9110684847534913 1.0703169558738395 0.948543830668712 1.092986710271119 0.8169787713454932 1.0639294813007298 0.9644743166756405 1.074193144051398 1.0962241762980647 0.843971030084574 1.0 10.662095912437948 -8.2585634218945 24.82034200792116 1.0488653651607691 0.9845250536515662 0.0 0.09901671896520231 349.55866601495677 3016798.213561559 0.012037250384539407 0.015192987806164397 5.513616787805977e-09 8.2585634218945 -0.06434031150920294 APSAS(ph)PLALHASR ddPTM_A549_MK2206_60min_R1 1 APSASPLALHASR 13 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 APS(0.161)AS(0.839)PLALHASR 66.673 0.0014712 3280700.0 1022.4 1044.1 1131.5 992.44 1652.5 1322.5 1348.2 1708.6 2373.1 2028.2 2072.8 True False 1194.9561247198953 1097.240230288326 1291.963714237987 1235.5878445523251 1409.4194390535133 1462.4460721955486 1593.1504886165324 1950.7992823680481 1835.5966390619901 1570.0282113539238 1558.0665536302854 0.7669480626072455 0.704231939086147 0.8292095810847872 0.793026358003394 0.9045951443919868 0.9386287567678404 1.022517609985595 1.2520641546554594 1.1781246666164942 1.0076772443999698 1.0 10.605541144853477 -7.278315045024108 1.209504531428732 1.0981383671059561 0.7644411274563344 0.7808994184378661 0.07592924648439639 0.17736050188657365 0.5104960502682875 0.014829317248294616 0.030893140493650304 5.268475380926665e-08 7.278315045024108 -0.3336972396496217 APSDS(ph)SLGTPSDGRPELR ddPTM_A549_MK2206_60min_R1 2 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.214)DS(0.264)S(0.264)LGT(0.214)PS(0.045)DGRPELR;APS(0.121)DS(0.721)S(0.158)LGTPSDGRPELR 161.31 2.2024e-23 180485000.0 2810.4 3827.2 2697.5 3141.8 4971.9 3069.1 2393.09 2971.5 6651.5 6542.8 10096.0 True False 3284.7268123168947 4021.9881327071007 3080.046062003509 3911.5411410407596 4240.5400962361055 3393.870124896301 2827.8834763412997 3392.71922483709 5144.945870262872 5064.776935828053 7588.884564575147 0.43283394079414167 0.5299840969358935 0.4058628163065149 0.5154303122885546 0.5587830543675566 0.4472159374697647 0.37263493103345346 0.4470642814458236 0.6779581144611737 0.6673941200094664 1.0 12.889672134543295 -9.590699079537625 0.7157692666974919 0.9666670440651579 0.46011581795601 0.5794257799587073 0.11086125601074043 0.14057489744542526 0.15519483939465567 0.030477100627179923 0.017757091460197313 2.5662615703604356e-10 9.590699079537625 -0.5065512261091479 APSDS(ph)SLGTPSDGRPELR ddPTM_A549_PD325901_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.247)DS(0.32)S(0.247)LGT(0.081)PS(0.105)DGRPELR 113.47 6.1265e-10 13661000.0 2003.4 2932.8 2030.1 3178.2 3217.6 2702.1 2540.4 2022.1 4080.8 4182.4 8756.8 True False 2206.783693174869 3179.957348662494 2167.8747939830105 3374.5101957840952 2991.6068761173997 2680.0949934784 2637.0763121602195 1981.7676291932373 3909.298167364266 3918.322550227151 7679.769113928787 0.2873502654099885 0.4140693947289391 0.28228385018126895 0.43940255829615377 0.38954385629790955 0.3489811937988494 0.34337963460090976 0.25805041789588545 0.5090385022479357 0.510213587426801 1.0 12.9068472227964 -10.088426086483217 0.6032463325552341 1.012587216227752 0.34231398074199554 0.3891147125685891 0.1536513217615786 0.1542216164884578 0.10736203502767608 0.04974646012117884 0.016741295379050825 8.157816149554482e-11 10.088426086483217 -0.6702732354857566 APSDSS(ph)LGTPSDGRPELR ddPTM_A549_MK2206_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.002)DS(0.145)S(0.739)LGT(0.109)PS(0.005)DGRPELR 148.01 1.6841e-17 24184000.0 3775.4 3499.0 2801.5 3584.2 4390.4 3394.3 3284.2 2569.8 5304.1 4944.4 4025.5 True False 4412.595220332058 3677.0841545626427 3198.794825839787 4462.329160900853 3744.5779759277107 3753.4825730460125 3880.896628626626 2934.077019682436 4102.729818907211 3827.456605965065 3025.857251851946 1.4582958986685088 1.2152206295627859 1.0571532493418174 1.4747322128860272 1.2375263154386675 1.2404691499404774 1.282577565829109 0.9696680231318457 1.3558900759102814 1.264916447602579 1.0 11.563128213094798 -10.969307818398079 1.0880010623160252 0.9915779826198644 1.2561569883561148 0.0 0.16188717294050897 0.5379779004864526 1.069961225960493 0.1141628795458375 0.02308145676980468 1.0732284619190631e-11 10.969307818398079 0.26457900573625037 APSDSS(ph)LGTPSDGRPELR ddPTM_A549_PD325901_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.087)DS(0.137)S(0.749)LGT(0.011)PS(0.016)DGRPELR 114.73 4.7889e-10 16030000.0 3419.6 4755.9 3892.1 5003.8 5407.4 5431.5 4267.9 4460.7 7840.8 7618.9 14340.0 True False 3766.7552746235315 5156.696383832503 4156.241311098606 5312.873361545674 5027.6028785172875 5387.267664808088 4430.317269984492 4371.727839148547 7511.278443116482 7137.8413537503875 12576.270908749635 0.2995128923314544 0.4100338185498896 0.3304828069668094 0.42245220384441395 0.3997689708655572 0.42836765396489884 0.35227590930012537 0.3476171808693325 0.5972580026000149 0.5675642172103981 1.0 13.618416580065542 -9.776455708987736 0.5553140191652105 1.0043770479886331 0.35835122962926325 0.5042475380460909 0.13367454793929343 0.13605058573127243 0.08799751866527795 0.03853590322042829 0.01646301148517804 1.6731862656324097e-10 9.776455708987736 -0.6460258183593699 APSDSSLGT(ph)PSDGRPELR ddPTM_A549_MK2206_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APSDS(0.014)S(0.014)LGT(0.963)PS(0.008)DGRPELR 167.16 1.4498e-24 26703000.0 2306.3 2803.1 2062.6 2113.2 2983.4 2378.7 1735.0 1853.4 3350.2 2903.6 3948.8 True False 2695.5470563786157 2945.7658169918645 2355.107695083758 2630.9340948651534 2544.5458120860826 2630.41245514673 2050.227041796237 2116.1251257994495 2591.3850491700623 2247.6747433622204 2968.203978664257 0.9081407732603533 0.9924404920168289 0.7934453669668607 0.8863724035735303 0.8572678395341186 0.8861966610294959 0.6907298341129757 0.7129311667966102 0.8730481691275914 0.7572507683160349 1.0 11.535374523822801 -10.078272820357041 1.0463869116648186 0.9847816529439276 0.8445556924199563 0.0 0.1070510230739188 0.4290475069928614 0.94307914155162 0.03235991987539272 0.016619718077992385 8.350782638676908e-11 10.078272820357041 -0.1402259605239713 APSDSSLGT(ph)PSDGRPELR ddPTM_A549_PD325901_60min_R1 2 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.001)DS(0.148)S(0.111)LGT(0.683)PS(0.058)DGRPELR;APS(0.008)DS(0.144)S(0.127)LGT(0.715)PS(0.006)DGRPELR 101.48 2.9715000000000003e-09 76255000.0 8368.3 7286.599999999999 6776.7 7577.5 8642.2 6806.8 6231.200000000001 7231.8 7407.299999999999 7488.9 7235.4 True False 9217.843655583141 7900.667354324926 7236.607613607546 8045.544965248885 8035.201685971469 6751.3676775873455 6468.331725843477 7087.556075762653 7095.996940579624 7016.049575936326 6345.491668979571 1.4526602722757145 1.2450835595526746 1.1404329232649166 1.2679151411670992 1.2662851210178363 1.0639628936228742 1.0193586349603798 1.1169435633192493 1.1182737777860392 1.1056746966093784 1.0 12.631516237683135 -2.0000000000000133 0.22165044632878209 1.0236350842201478 2.9669434796032346 0.6721120594681751 0.07268580026954467 19.801545150140928 0.23060190666592617 0.045907578259915 13.996656263441391 0.009999999999999693 2.0000000000000133 1.9433083953830868 APSDTGSLS(ph)PPWDQDRR ddPTM_A549_MK2206_60min_R1 3 APSDTGSLSPPWDQDRR 17 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 APS(0.001)DT(0.091)GS(0.084)LS(0.824)PPWDQDRR;APSDT(0.003)GS(0.141)LS(0.855)PPWDQDRR;APSDT(0.002)GS(0.031)LS(0.967)PPWDQDRR 98.132 5.4273e-07 18778300.0 7317.37 6513.07 5948.450000000001 5431.38 8784.419999999998 7441.5599999999995 7216.88 6269.3 9487.58 10287.06 11448.15 True False 8552.363163479682 6844.557443428781 6792.029656172295 6762.068343823917 7492.243454650808 8229.020939892252 8528.093679192176 7157.99247392602 7338.658278551997 7963.206001326549 8605.258402133617 0.9938531492975481 0.7953924360634793 0.7892882861586419 0.7858065415150469 0.87065874196098 0.9562781912338532 0.9910328406962993 0.8318160988810334 0.8528109134680284 0.9253883647877587 1.0 13.071002799400482 -7.041706683472389 5.559456749621588 0.9270219079420007 0.8332540623478784 0.23751972411333167 0.07153758153281053 0.2329021186984709 18.439582614980647 0.01194470154790503 0.021293200045614333 9.084338667906971e-08 7.041706683472389 -0.09376784559412232 APSDTGSLS(ph)PPWDQDRR ddPTM_A549_PD325901_60min_R1 2 APSDTGSLSPPWDQDRR 17 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 APSDTGSLS(1)PPWDQDRR;APSDTGS(0.032)LS(0.968)PPWDQDRR 165.49 3.0017e-23 27410000.0 7576.1 7249.8 6649.7 7590.599999999999 8891.0 8024.3 7385.5 7676.200000000001 9989.6 10117.1 12314.4 True False 8345.220094769957 7860.7660891753085 7100.9886298945 8059.4541224966215 8266.52683228487 7958.952761248185 7666.559244000671 7523.092169137593 9569.77185176977 9478.304579404912 10799.806867413277 0.7727193825984379 0.7278617280549652 0.6575107052442409 0.7462590971709652 0.7654328391026897 0.7369532491606935 0.7098792911874481 0.6965950652170775 0.8861058321927084 0.8776364888527969 1.0 13.398717892501484 -9.050262723330455 1.4987827999438572 0.9640052832604267 0.7248204446718725 0.7574911903394945 0.04743052652163261 0.09173864703837699 0.4199744281107952 0.009393491982298118 0.009008599837440803 8.907119453204365e-10 9.050262723330455 -0.23918483858855422 APSEEDS(ph)LSSVPISPYKDEPWK ddPTM_A549_MK2206_60min_R1 1 APSEEDSLSSVPISPYKDEPWK 22 1 A0A0G2JIC6;Q9Y676 A0A0G2JIC6 MRPS18B 28S ribosomal protein S18b, mitochondrial 1 APS(0.035)EEDS(0.679)LS(0.142)S(0.142)VPIS(0.002)PYKDEPWK 65.21300000000001 0.00028752 1703600.0 869.46 828.77 638.39 766.37 1649.0 918.84 902.12 538.67 1068.5 918.39 1167.8 True False 1016.2035917438968 870.9508530371196 728.9233013984876 954.1306844036568 1406.434284417092 1016.0710389233703 1066.0235267695793 615.0281221076885 826.4864560438818 710.9250611504438 877.8030303596331 1.1576669897432017 0.9921939466081517 0.8303950615206354 1.0869530537081338 1.6022208123853028 1.1575159845450627 1.2144222449685926 0.7006447925518251 0.9415397617222544 0.8098913270545216 1.0 9.777753440465865 -8.202446895709972 24.999159267247045 0.9512403525761106 1.145899386774488 0.2935665304293731 0.19658229327649007 348.07765099587556 147504.38006036103 0.032270713406641366 0.04166130650599578 6.274124094929574e-09 8.202446895709972 0.19465903419837738 APSEEDSLS(ph)SVPISPYKDEPWK ddPTM_A549_MK2206_60min_R1 1 APSEEDSLSSVPISPYKDEPWK 22 1 A0A0G2JIC6;Q9Y676 A0A0G2JIC6 MRPS18B 28S ribosomal protein S18b, mitochondrial 1 APS(0.01)EEDS(0.234)LS(0.256)S(0.256)VPIS(0.229)PY(0.016)KDEPWK 48.867 0.0034568000000000003 2480700.0 692.63 818.58 696.22 808.34 1686.7 1154.5 904.2 1060.0 1321.0 1131.0 1524.9 True False 809.5290108223218 860.2422255621283 794.9544649816802 1006.3833362877621 1438.5886643579786 1276.6684237049237 1068.4814358456233 1210.2582461138545 1021.795609203527 875.5063144863856 1146.225244901014 0.7062564835520013 0.7505001563950174 0.6935412289321293 0.8779978811011717 1.2550662888970068 1.1138023956322602 0.9321740561890132 1.0558642391604018 0.8914439930100888 0.7638169883110476 1.0 10.162674860842984 -6.4731050998513675 5.643771392388027 0.9877448878634125 0.7271730357176975 0.5186999341978167 0.11960285239170078 0.12659354390824384 9.378227046079923 0.015671691575954626 0.03636253284879092 3.3643014297411e-07 6.4731050998513675 -0.260571852145715 APSEEELHGDQTDFGQGSQS(ph)PQKQEEQR ddPTM_A549_MK2206_60min_R1 1 APSEEELHGDQTDFGQGSQSPQKQEEQR 28 1 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2;A0A087WWG1 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 APSEEELHGDQTDFGQGS(0.037)QS(0.963)PQKQEEQR 284.44 4.204699999999999e-168 47241000.0 1829.0 1958.2 1966.5 1846.6 3473.7 2466.8 2771.3 2409.1 3157.3 3538.0 3370.0 True False 2137.690485243239 2057.864015851547 2245.3792700388885 2299.017082897023 2962.723331582564 2727.8351386706827 3274.8093377117643 2750.5973025593244 2442.176591172062 2738.7633427522833 2533.1359927316 0.8438909286264046 0.812378025402598 0.8864029710531215 0.9075774413587187 1.169587159980195 1.0768609133097231 1.2927886016022312 1.0858466779721627 0.9640921759350741 1.0811750141369023 1.0 11.306708815629966 -6.5386584474298015 22.747036681627602 1.0326217181150756 0.8528644638233507 0.5254009548286698 0.09638877102523959 68.04451749217249 98088.37353730631 0.0159828315845799 0.033284524816034514 2.892954162898321e-07 6.5386584474298015 -0.17975725429172495 APSEEELHGDQTDFGQGSQS(ph)PQKQEEQR ddPTM_A549_PD325901_60min_R1 2 APSEEELHGDQTDFGQGSQSPQKQEEQR 28 1 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2;A0A087WWG1 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 APSEEELHGDQTDFGQGS(0.094)QS(0.906)PQKQEEQR;APSEEELHGDQTDFGQGS(0.002)QS(0.998)PQKQEEQR 332.7 1.2123999999999995e-246 145239000.0 12871.8 11236.900000000001 12215.599999999999 12610.0 16079.7 13533.1 12216.5 14261.7 13048.5 14068.6 13765.1 True False 14178.535660281661 12183.872998903977 13044.624074370166 13388.891060612137 14950.317343953548 13422.890920485013 12681.40559262531 13977.239205412794 12500.11692238105 13180.306195037701 12072.079964158276 1.1744898726961222 1.0092604617495586 1.0805614370596741 1.1090790568289344 1.2384210002204004 1.1118954612906196 1.0504739556295275 1.157815326514643 1.0354567696282335 1.0918007695583298 1.0 13.559386646814996 -8.905909731781264 5.4385250842679564 1.0153036666254858 1.1130549786973691 0.18716526312897663 0.06282976032780566 0.16662481441298646 7.615173677502004 0.010381456438078984 0.010958632874033033 1.241910412163578e-09 8.905909731781264 0.09775131207188337 APSERPGTSSGTFSPVRLDES(ph)GEDEVFLQENK ddPTM_A549_PD325901_60min_R1 2 APSERPGTSSGTFSPVRLDESGEDEVFLQENK 32 2 E5RJ29;Q9NYI0-2;Q9NYI0 E5RJ29 PSD3 PH and SEC7 domain-containing protein 3 1 APS(0.018)ERPGT(0.015)S(0.018)S(0.018)GT(0.018)FS(0.018)PVRLDES(0.897)GEDEVFLQENK;APSERPGTSSGTFSPVRLDES(1)GEDEVFLQENK 142.6 1.5529e-40 9253900.0 4845.9 3939.6000000000004 4343.8 4406.7 4922.0 5294.8 5015.8 5083.1 5189.7 5385.2 6130.9 True False 5337.852200636965 4271.603918027401 4638.596389391363 4678.891850658164 4576.295699978195 5251.6809042853465 5206.679013751076 4981.713582885192 4971.594956667894 5045.1775529560155 5376.838166977206 0.992749276595364 0.7944453199767486 0.862699647142091 0.8701939142216327 0.8511127837330715 0.9767228882839482 0.968353305801318 0.9265135806915781 0.9246316891592191 0.938316794420531 1.0 12.392542334439314 -7.262425190199902 24.999376137702352 0.9615209718700455 0.8689412044942476 0.40505051718284335 0.04872897339778293 63.225238665490735 1603345.5569968005 0.007278511347501515 0.012045205095456537 5.4648067631210996e-08 7.262425190199902 -0.09257976737579787 APSPS(ph)GLMSPSR ddPTM_A549_MK2206_60min_R1 1 APSPSGLMSPSR 12 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 APS(0.446)PS(0.551)GLMS(0.003)PSR 51.135 0.027597000000000003 9717900.0 2789.0 2933.0 2294.8 2687.1 3632.5 2464.9 2671.1 2412.6 3695.6 3615.1 3559.4 True False 3259.7150154966635 3082.277172144106 2620.2371466489917 3345.439620628501 3098.164061943652 2725.7340819318033 3156.4042947215703 2754.5934382776272 2858.552500660524 2798.446399204008 2675.502745557525 1.2183560719229982 1.1520366320916695 0.9793438451893582 1.250396631505371 1.1579745403318777 1.0187745411428502 1.1797424988490657 1.0295610583287296 1.0684169565540307 1.045951608104541 1.0 11.385594294072375 -2.0000364469648724 0.0267715442178059 0.4413952817866726 2.0341688726793863 0.2689524865623497 0.07694723263614024 1082.563574178634 2.165548002418724 42.73410824507836 96.26177590044982 0.009999160812833726 2.0000364469648724 1.5927735908927136 APSPT(ph)KPLR ddPTM_A549_PD325901_60min_R1 1 APSPTKPLR 9 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 APS(0.404)PT(0.596)KPLR 47.559 0.013528 21011000.0 1439.5 1735.3 1557.8 1661.8 2202.9 1765.0 1633.8 1444.8 1618.1 1917.4 1762.3 True False 1585.63698029611 1881.5398210358787 1663.5216758123918 1764.4456117783686 2048.175903592435 1750.6264251838847 1695.9751530496635 1415.9823305763266 1550.0968840943249 1796.3350367744697 1545.5482721401313 1.0259381792717919 1.2173931121740362 1.0763311025600655 1.1416308656184053 1.325209920979247 1.1326895812576467 1.0973291378995462 0.9161682983965335 1.002943041014109 1.162263948111483 1.0 10.593902999285014 -8.011510939914048 3.7750687446637725 0.9949967733638808 1.1586207274129068 0.3001658406649924 0.09109943273476458 0.1355111858277291 4.249143263002468 0.011650715008511437 0.015788355359688172 9.738432538272605e-09 8.011510939914048 0.16362395404902597 APSPTGPALISGAS(ph)PVHCAADGTVELK ddPTM_A549_MK2206_60min_R1 1 APSPTGPALISGASPVHCAADGTVELK 27 0 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 APS(0.001)PT(0.001)GPALIS(0.144)GAS(0.855)PVHCAADGTVELK 102.46 8.1609e-13 2959100.0 774.24 944.18 1227.2 998.06 1188.5 984.87 1158.5 1057.1 1852.1 1646.5 1922.3 True False 904.9127836493853 992.2347290811528 1401.2354132681025 1242.5847448046163 1013.6732243964301 1089.0882896962037 1368.9844541331054 1206.9471622329756 1432.6023071959512 1274.5545064560874 1444.9398572189775 0.6262632864118217 0.6866962137724336 0.9697534511678629 0.8599560311085704 0.7015331602433679 0.7537256891732033 0.9474335193216549 0.8352923176719219 0.9914615477167528 0.882081354520302 1.0 10.496793729292769 -8.292893448712153 0.9339444887389976 1.0006573651449684 0.7715774660848365 0.3453528570421175 0.10202198216271571 0.3143750052537003 0.5399482326921106 0.02018835109943762 0.02648485595270705 5.09455847358838e-09 8.292893448712153 -0.22907989906013193 APSPTGPALISGAS(ph)PVHCAADGTVELK ddPTM_A549_PD325901_60min_R1 1 APSPTGPALISGASPVHCAADGTVELK 27 0 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 APSPTGPALIS(0.067)GAS(0.932)PVHCAADGTVELK 98.65700000000001 4.0982e-10 4088400.0 1496.1 1810.8 1849.5 1423.6 1738.3 1731.8 1738.7 1702.7 1648.7 1927.9 2190.1 True False 1647.982970629391 1963.4024710031524 1975.018191946988 1511.5325387698203 1616.2078048094465 1717.696794976459 1804.8671799531467 1668.7383127576907 1579.4108725086915 1806.1720649825268 1920.7315841877655 0.857997538123624 1.0222159551947136 1.0282635055341056 0.7869566738077115 0.841454276128283 0.8942929918564517 0.939676941229862 0.8688034947180623 0.8222965069721541 0.9403563099871222 1.0 10.907440205946711 -6.225925431202671 24.993552619302744 0.8989127877290729 0.9747646761946085 0.19917160818105495 0.07069772842773553 957.8601161506397 674109.5622428836 0.011718800665491559 0.031003595103380483 5.943942079349064e-07 6.225925431202671 0.07585188846553559 APSS(ph)LSDAVPQR ddPTM_A549_PD325901_60min_R1 2 APSSLSDAVPQR 12 0 M0R2Z9;Q8IX01-4;Q8IX01;M0R3F6;Q8IX01-3 M0R2Z9 SUGP2 SURP and G-patch domain-containing protein 2 1 APS(0.041)S(0.865)LS(0.094)DAVPQR;APS(0.252)S(0.747)LS(0.001)DAVPQR 116.71 2.3476e-05 12572800.0 7005.0 6579.7 6835.200000000001 7559.6 7952.5 7740.0 6421.1 7568.0 7082.3 7787.200000000001 8942.400000000001 True False 7716.1424431915575 7134.1944104591585 7299.0777753966195 8026.539322902729 7393.943834635631 7676.968006188817 6665.4584742607385 7417.050303018848 6784.655560361683 7295.514863028131 7842.541490544119 0.9838828972081355 0.9096788865013942 0.9307031125301967 1.023461505760659 0.9427994539207258 0.9788877770611814 0.8499105146332208 0.9457457524402908 0.8651092976099716 0.9302488066941632 1.0 12.937105541251706 APSS(ph)PVAKPGPVK ddPTM_A549_MK2206_60min_R1 2 APSSPVAKPGPVK 13 1 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 APS(0.044)S(0.956)PVAKPGPVK;APS(0.035)S(0.965)PVAKPGPVK 85.493 8.2443e-05 183801000.0 4728.3 5623.7 5343.6 5343.0 6231.2 4707.799999999999 5655.799999999999 5215.2 7286.5 7114.0 6790.7 True False 5526.321444163811 5909.9223092351895 6101.402831111007 6652.03523985638 5314.598734420729 5205.976271215276 6683.385650138986 5954.470570880161 5636.119384149502 5506.94245911242 5104.381776214384 1.0826622471531417 1.1578135351815761 1.1953265054629305 1.3032009617411098 1.0411836276012743 1.0199033887853581 1.3093428240972318 1.1665409900621182 1.1041727737554685 1.0788657080420405 1.0 12.317520522474311 -9.733147157871693 0.7647987017184688 1.0105399364000096 1.1608619645277167 0.18445380858415683 0.09067404575483892 0.5263240642920877 0.6492289536899468 0.03584739133908026 0.019521550323058936 1.8486421124365316e-10 9.733147157871693 0.15032202812770712 APSS(ph)PVAKPGPVK ddPTM_A549_PD325901_60min_R1 4 APSSPVAKPGPVK 13 1 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 APS(0.006)S(0.994)PVAKPGPVK;APS(0.04)S(0.96)PVAKPGPVK;APS(0.024)S(0.976)PVAKPGPVK;APS(0.026)S(0.974)PVAKPGPVK 123.42 1.637e-06 325181000.0 24259.199999999997 25582.3 26175.0 27986.0 30204.0 30705.6 30480.7 32213.899999999998 31597.3 30058.299999999996 34018.0 True False 26721.976125320845 27738.21020208966 27951.392903061576 29714.63165918247 28082.575238143316 30455.543774009213 31640.65971817902 31571.368493184345 30269.37536357061 28160.41380821842 29834.001657869245 0.895688631775364 0.929751580769696 0.9368972095531443 0.9959988606270225 0.9412942842931042 1.020833347241436 1.0605570141420582 1.0582344552782057 1.0145932051185806 0.9439033399259269 1.0 14.864669880010572 -6.249858849850464 0.8787420467881251 1.0151523010615402 0.89803503075598 0.5583966343227432 0.034931044671630676 0.3909236302384341 0.46564720181749086 0.004828857343302688 0.03160685792722607 5.62524121577636e-07 6.249858849850464 -0.11711727030556018 APST(ph)PLLTVR ddPTM_A549_MK2206_60min_R1 2 APSTPLLTVR 10 0 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;F8WF18;F8WAT3;C9IZE1 F8WAE5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed 1 APS(0.004)T(0.995)PLLTVR;APS(0.046)T(0.954)PLLTVR 131.42 1.1787e-06 9436000.0 1961.75 2359.8999999999996 1780.04 1837.06 2523.5 2004.1399999999999 1988.4299999999998 2224.18 3003.4 2597.0 2996.3 True False 2292.8454398173476 2480.008830052124 2032.4764382608812 2287.1397824687583 2152.2964928602355 2216.2167645595373 2349.7019923451794 2539.4643262655773 2323.134695444264 2010.3358963051685 2252.2360163269136 1.0180307140086777 1.1011318583283631 0.9024260439523429 1.0154973838837582 0.9556265317035176 0.9840073369281614 1.0432752053122831 1.1275302889468455 1.0314792404541049 0.8925955724585868 1.0 11.13714230290748 -7.756826981100507 24.9737906096153 1.0274221160380506 0.9956746095592803 0.02023027392885579 0.06853588050500957 267.89809043131754 1450526.336569361 0.008734593361841044 0.012704043330717965 1.7505439502217476e-08 7.756826981100507 -0.03174750647877023 APST(ph)PLLTVR ddPTM_A549_PD325901_60min_R1 1 APSTPLLTVR 10 0 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;F8WF18;F8WAT3;C9IZE1 F8WAE5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed 1 APS(0.051)T(0.949)PLLTVR 115.91 8.9832e-05 6579300.0 1370.7 1273.7 1546.0 1631.3 1421.0 1651.8 1340.1 1746.7 1786.5 1749.8 1828.0 True False 1509.8524549439926 1381.039169050539 1650.9208568532279 1732.0616960488949 1321.1938621838708 1638.3482884525442 1391.0982388308569 1711.8606982403578 1711.4196177210981 1639.3173293772645 1603.167588646746 0.9417932757850214 0.8614440429252262 1.0297868223788076 1.0803996464966896 0.8241146287763385 1.02194449292447 0.8677185396475614 1.0677989689682792 1.0675238383316674 1.0225489468390718 1.0 10.646709531534345 -8.284878213174006 24.769676644086857 1.0354706505032611 0.9499728354209496 0.25793590376931663 0.0754196305916829 782.6601091311497 827096.6711767344 0.012130250401242871 0.014669651505245646 5.189455435866559e-09 8.284878213174006 -0.08549781508231158 APST(ph)PVPPSPAPAPGLTK ddPTM_A549_MK2206_60min_R1 2 APSTPVPPSPAPAPGLTK 18 0 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;F8W0I9;F8VVA6;F8VP44 F8W126 MCRS1 Microspherule protein 1 1 APS(0.019)T(0.981)PVPPSPAPAPGLTK;APS(0.17)T(0.83)PVPPSPAPAPGLTK 124.43 1.3400999999999998e-10 7109800.0 3452.6 4053.3 4364.7 3768.8 5801.3 4877.299999999999 3818.5 4701.3 6108.9 6034.6 6557.9 True False 4035.3144720343403 4259.595656955917 4983.680091502026 4692.1561691878605 4947.9364549356405 5393.412648710282 4512.272022535406 5367.723672127417 4725.243903908719 4671.379668788282 4929.392441167527 0.8186230900046935 0.8641218380955343 1.0110130509961266 0.9518731213205096 1.0037619268478695 1.0941333466711878 0.9153809676120398 1.0889219586777454 0.9585854565861153 0.9476583016145222 1.0 12.26719412677661 -5.667744799948022 4.235317833699304 0.9917688091364122 0.8289669026186018 0.5601845035414967 0.053399217977586864 0.10468370652712422 3.3294655652401537 0.006628031145892065 0.02841958383729789 2.149092952812672e-06 5.667744799948022 -0.16280190651781035 APST(ph)PVPPSPAPAPGLTK ddPTM_A549_PD325901_60min_R1 2 APSTPVPPSPAPAPGLTK 18 0 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;F8W0I9;F8VVA6;F8VP44 F8W126 MCRS1 Microspherule protein 1 1 APS(0.084)T(0.916)PVPPSPAPAPGLTK;APS(0.015)T(0.985)PVPPSPAPAPGLTK 132.59 1.3687e-12 13343500.0 4621.5 5605.2 5104.7 5376.700000000001 7312.9 5680.7 6018.299999999999 5923.1 5553.8 6063.0 6919.4 True False 5090.671277831515 6077.569875451108 5451.135639054767 5708.806547628331 6799.26713213542 5634.438262630085 6247.329699840122 5804.959123917941 5320.39309985975 5680.1811452819475 6068.357665690534 0.8388878108838751 1.001518072972636 0.8982884561789368 0.9407498473441925 1.1204460097296711 0.9284947547647436 1.0294926640796842 0.9565947565579721 0.8767434935386803 0.936032689272211 1.0 12.567090404411713 -5.247088294134406 23.55765195836531 0.9575344218835308 0.838887625595256 0.23013612991928678 0.06542278900011865 1468.4238091177021 2410361.618106815 0.00957486549558199 0.2651600808244643 5.6612418159814646e-06 5.247088294134406 -0.11864679628827479 APSYS(ph)GLSMVSGVK ddPTM_A549_MK2206_60min_R1 1 APSYSGLSMVSGVK 14 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 APS(0.452)Y(0.001)S(0.543)GLS(0.004)MVSGVK 91.024 2.3661e-05 5415100.0 2997.7 3713.0 3864.3 3991.3 5287.0 4169.4 3825.9 3640.8 6655.8 6212.3 5539.5 True False 3503.6384732715496 3901.9758404947365 4412.315847043618 4969.168679176264 4509.289303646551 4610.603140576272 4521.01650674825 4156.8945494823765 5148.27192712856 4808.93711537027 4163.889267577656 0.8414341131866344 0.9370988491163004 1.0596621484150284 1.1933959718547174 1.0829513019854708 1.1072828416636766 1.0857677080779704 0.9983201479084124 1.2364094230881333 1.1549147458880122 1.0 12.023715987487515 -5.6674333727021 2.4200065667169435 1.1064864443041234 0.8501189860794273 0.607619121735248 0.06849003091655916 0.2017854076520622 2.189045697486634 0.012453410551124885 0.07502004939167094 2.1506345936882065e-06 5.6674333727021 -0.2563674582246961 APT(ph)PPSTPVPLPEK ddPTM_A549_MK2206_60min_R1 1 APTPPSTPVPLPEK 14 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 APT(0.993)PPS(0.003)T(0.004)PVPLPEK 70.332 0.0025453000000000003 1076000.0 888.2 1298.4 1239.0 1341.9 1950.9 1371.1 1445.0 1296.5 2067.4 2287.0 1817.5 True False 1038.1064455948865 1364.4830140852048 1414.708830703373 1670.6655602401813 1663.9251943416034 1516.1888919374803 1707.5377956170382 1480.2828453647269 1599.1372009594018 1770.3651116095168 1366.1645895518343 0.7598692379630728 0.9987691267366393 1.0355332304195233 1.22288747125867 1.2179536836681213 1.1098142226295449 1.2498770709444242 1.0835318501779707 1.170530412798939 1.2958651725779828 1.0 10.415915588367701 -5.267616465941923 1.6396031705252867 1.1129964335187883 0.6372877790889633 0.5914871469090393 0.09343886106409442 0.5639046087683725 1.436485245314724 0.013139656876723527 0.4224928552077217 5.399872854750332e-06 5.267616465941923 -0.475708654429825 APT(ph)TDEDKKAAEK ddPTM_A549_PD325901_60min_R1 1 APTTDEDKKAAEK 13 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 APT(0.539)T(0.461)DEDKKAAEK 59.513000000000005 0.0031812 24771000.0 3413.5 3438.5 3479.7 3594.6 3771.5 3269.9 3268.9 4382.9 3893.9 4001.6 4059.2 True False 3760.036007114113 3728.2744624168017 3715.8533671359473 3816.6302780710826 3506.6028509686607 3243.2710185318883 3393.2997783107166 4295.479621181465 3730.252924402008 3748.93829308267 3559.944133388878 1.0562064645477338 1.0472845423188375 1.0437954158563303 1.0721039811481123 0.9850162585643053 0.9110454818976236 0.9531890533013717 1.206614334448107 1.047840298788904 1.0530890802249415 1.0 11.797638885652852 -6.740336697127415 24.976291342594852 1.0211455623162111 1.0535179333810463 0.04607785317284796 0.0707815435971128 739.8735472729945 875679.4660872541 0.010454169072096231 0.021746742605647344 1.8182906389589417e-07 6.740336697127415 0.03237237106483515 APTS(ph)VTPVAPGK ddPTM_A549_PD325901_60min_R1 1 APTSVTPVAPGK 12 0 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 APT(0.075)S(0.506)VT(0.418)PVAPGK 69.641 0.0035119 12237000.0 7455.8 7182.5 5711.1 7064.1 8912.6 6986.3 7157.1 7712.3 8019.6 9101.5 8474.4 True False 8212.707327330134 7787.794481985942 6098.689589634194 7500.433413264882 8286.60972280082 6929.4058891003815 7429.467357015398 7558.4721263176925 7682.56410091023 8526.829736728294 7432.102523647686 1.1050314902409777 1.0478588605588397 0.8205873869782072 1.0091940187046369 1.1149751630086153 0.9323614504848649 0.9996454345693021 1.017003210365831 1.0336999626237149 1.147297108671116 1.0 12.859554688069668 -8.262370922559324 19.119640813217863 1.016440226669072 1.0005360862955421 0.009138271645133922 0.08583923960347711 20.138015724487172 413339.09205045394 0.012322224586717988 0.015345974670313867 5.4654896654165996e-09 8.262370922559324 -0.01590414037352983 APTSVT(ph)PVAPGK ddPTM_A549_MK2206_60min_R1 1 APTSVTPVAPGK 12 0 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 APT(0.109)S(0.106)VT(0.785)PVAPGK 75.08800000000001 0.0013468 7078500.0 9471.7 7869.8 5700.2 4942.2 5618.9 4382.1 3849.5 4518.1 6309.3 7731.6 11267.0 True False 11070.291399168065 8270.339205366416 6508.574073265018 6153.039221863785 4792.367253311822 4845.810913397442 4548.904321264904 5158.554511100947 4880.253623881764 5985.026190170598 8469.09294661927 1.3071401469961612 0.976531873896579 0.7685089907843248 0.7265287157250981 0.5658654691261666 0.5721759040714997 0.5371182427606672 0.6091035419749599 0.5762427753056938 0.7066903419166898 1.0 13.047991747550334 -3.3190590034614513 8.44368749192134 0.7693706970196685 1.1151744155225327 0.0 0.23125977847194498 0.0 0.0 0.03372666239032424 0.0 0.0004796682762421942 3.3190590034614513 0.3458037185028642 APTSVT(ph)PVAPGK ddPTM_A549_PD325901_60min_R1 1 APTSVTPVAPGK 12 0 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 APT(0.017)S(0.208)VT(0.774)PVAPGK 114.87 2.9274e-05 15213000.0 5335.9 5807.6 5342.3 4881.6 6334.8 5331.7 5006.9 5490.1 6434.0 6073.4 7278.3 True False 5877.59663991803 6297.02683377397 5704.860603859636 5183.125345082013 5889.8655018736 5288.280402919498 5197.440319380808 5380.5956485998695 6163.601354837702 5689.924487507068 6383.115240945082 0.920803779667903 0.9865131046641786 0.8937423794678312 0.8120056037582365 0.9227258602653001 0.8284795438122963 0.8142482351002137 0.8429419563171195 0.9656102266963178 0.8914024379520085 1.0 12.640044979148431 -8.877810877565368 5.138610582709254 0.9851039006168394 0.8775831386100722 0.19891350931010177 0.05805292441331019 0.14206163576856223 5.7646677144638865 0.009635881480951625 0.010193752625626249 1.3249183724521786e-09 8.877810877565368 -0.10752076200676719 APTT(ph)DEDKKAAEK ddPTM_A549_PD325901_60min_R1 1 APTTDEDKKAAEK 13 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 APT(0.158)T(0.842)DEDKKAAEK 68.173 0.0013770999999999998 26916000.0 4225.9 4333.6 3744.1 4151.1 3905.6 3760.6 4635.5 4799.5 4135.7 4493.9 4783.4 True False 4654.910257056844 4698.807680770522 3998.197141102306 4407.504019167884 3631.284129588548 3729.9749204229565 4811.906489142931 4703.770207365089 3961.890911284158 4210.154387066227 4195.0721244709175 1.1096138800340463 1.1200779250876731 0.9530699407478146 1.050638436812039 0.8656070794126156 0.8891324892044331 1.147037844969068 1.1212608669888668 0.9444154459641935 1.0035952332040565 1.0 12.034479899313368 -5.753872773686952 24.94238512269005 0.9858899114359877 1.114845973626478 0.2212345401426068 0.08294625502360382 170.6545293956292 562527.0347376848 0.011576721848457318 0.0431378822283599 1.7624922918713478e-06 5.753872773686952 0.12895606219049027 APTTVEDRVGDST(ph)PVSEKPVSAAVDANASESP ddPTM_A549_MK2206_60min_R1 2 APTTVEDRVGDSTPVSEKPVSAAVDANASESP 32 2 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 APTTVEDRVGDS(0.201)T(0.789)PVS(0.009)EKPVS(0.001)AAVDANASESP;APTTVEDRVGDS(0.22)T(0.773)PVS(0.004)EKPVS(0.001)AAVDANASESP 74.03 3.7445e-05 23223000.0 1777.75 2351.4 2886.3999999999996 2350.14 2903.0 1485.12 1619.9099999999999 1276.49 3938.6 3997.8 3405.3 True False 2077.7907381854397 2471.076216358558 3295.73492247152 2925.9244055017953 2475.9725455808452 1642.2744126571283 1914.2266785453246 1457.436366586673 3046.513388651784 3094.694203407317 2559.6700285011616 0.8117416366366993 0.9653885808888889 1.287562414598169 1.1430865591746204 0.9673014560516122 0.6415961410536878 0.7478411893841714 0.5693844715758494 1.1901977031139823 1.209020760077987 1.0 11.321742126556193 -5.311279080540983 4.644791910299542 1.012440860033215 0.8068096320853666 0.01472438215585492 0.22761086921299892 0.44681642979954656 20.03983574847183 0.033265181886886694 0.24856471544402334 4.883384489372348e-06 5.311279080540983 -0.2056312279478485 APVAS(ph)PAALGSTATASPAAPAR ddPTM_A549_PD325901_60min_R1 1 APVASPAALGSTATASPAAPAR 22 0 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 1 APVAS(0.998)PAALGS(0.001)TATASPAAPAR 89.04899999999999 2.0336000000000003e-06 2308700.0 1076.8 1102.8 1130.0 1509.4 1892.8 1637.1 1423.6 1427.1 1668.8 1786.3 1887.7 True False 1186.1159433017372 1195.7368262769362 1206.688595242009 1602.6322099038814 1759.85625780551 1623.7680003787748 1477.7758770238115 1398.6353709617072 1598.6661394083242 1673.5127131481354 1655.5248671162267 0.7164591525392445 0.7222705318584557 0.7288858169457463 0.9680508228762039 1.0630201290005503 0.9808176443808002 0.8926328479728379 0.8448289716106786 0.9656551654177534 1.0108653433054389 1.0 10.693072965826369 -6.259183131686513 6.636206507290066 0.9717826071553329 0.7215132175537456 0.7951504185868076 0.05492423187782406 0.04736911424279811 12.245088302038255 0.008283634628138171 0.020817073634051903 5.505754828216195e-07 6.259183131686513 -0.2502693896015873 APVHFVEPLS(ph)PTGVAGHR ddPTM_A549_MK2206_60min_R1 3 APVHFVEPLSPTGVAGHR 18 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 APVHFVEPLS(0.999)PT(0.001)GVAGHR;APVHFVEPLS(0.992)PT(0.008)GVAGHR;APVHFVEPLS(0.99)PT(0.01)GVAGHR 140.95 1.5836e-16 94920000.0 2654.11 3893.99 3502.4300000000003 3884.3799999999997 5622.17 5028.379999999999 4863.1 4271.39 6827.68 6437.639999999999 6757.02 True False 3102.0588812405326 4092.1774584239433 3999.127239645207 4836.053274376444 4795.156240643567 5560.479834031493 5746.662321013988 4876.8726130832565 5281.22138156452 4983.372652864846 5079.065449735098 0.6107538703606039 0.8056949647375333 0.7873746222060958 0.9521541555698346 0.9441020770649178 1.094784048179868 1.1314408876762376 0.9601909369641246 1.0398017969703395 0.9811593692152081 1.0 12.310347349559871 -5.872811906363067 0.8977138137178685 1.0274895865600835 0.5949780351077432 0.8332764854816318 0.05853652393442085 0.2937490981445518 0.2985187801139087 0.008858045994452581 0.10057825058823006 1.3402570292131643e-06 5.872811906363067 -0.4325115514523403 APVHFVEPLS(ph)PTGVAGHR ddPTM_A549_PD325901_60min_R1 4 APVHFVEPLSPTGVAGHR 18 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 APVHFVEPLS(0.983)PT(0.017)GVAGHR;APVHFVEPLS(1)PTGVAGHR;APVHFVEPLS(0.997)PT(0.003)GVAGHR;APVHFVEPLS(0.999)PT(0.001)GVAGHR 169.43 3.8367e-30 141693000.0 5149.849999999999 5091.84 5226.150000000001 5595.39 6498.3099999999995 6087.120000000001 6241.16 5701.63 6357.41 5937.66 6836.6 True False 5672.658980880806 5520.947226614032 5580.827966392944 5941.004532247307 6041.891123552477 6037.5485128982045 6478.670759093795 5587.906516807792 6090.230166188798 5562.755134272607 5995.741540778083 0.9461146619313164 0.9208114107429595 0.9307986223950384 0.9908706857761463 1.0076970600651352 1.0069727775681765 1.0805453695812648 0.9319792187177294 1.0157592892835825 0.9277843443449556 1.0 12.549722478842712 -6.341326014136973 3.3162147038150978 1.0072334152390092 0.9305623364790245 0.29939523612968355 0.04027428345248518 0.142797238517755 3.0286415626445224 0.004280061124888355 0.011005413926241823 4.55694708765607e-07 6.341326014136973 -0.07667107875998469 APVPASELLASGVLSR ddPTM_A549_PD325901_60min_R1 1 APVPASELLASGVLSR 16 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 78.692 0.0010048 1605300.0 3561.8 2629.2 3393.1 3361.0 3477.5 3950.0 3431.1 3550.4 3522.0 3269.2 3617.5 False True 3923.3913139414267 2850.7719111782026 3623.376170367843 3568.6013366151765 3233.2523967237225 3917.8325096183257 3561.67238806996 3479.5844867650826 3373.98258808492 3062.782154074839 3172.570433221882 1.2366601141009355 0.8985685176051776 1.1420947924198324 1.1248296646927733 1.0191270658222127 1.2349079688168176 1.1226456474452258 1.096771390897511 1.0634854793935955 0.9653945337202339 1.0 11.631436477895361 -9.502285131812394 0.9250127463634014 1.0117698267449418 1.1050271270029268 0.20835500810530783 0.09013158481836842 0.6242120502345225 1.1289396022563236 0.02501845993348547 0.017500420008031096 3.145682368864698e-10 9.502285131812394 0.09325730025798507 APVPEPGLDLSLS(ph)PRPDS(ph)PQPR ddPTM_A549_PD325901_60min_R1 2 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 2 APVPEPGLDLS(0.457)LS(0.549)PRPDS(0.994)PQPR;APVPEPGLDLS(0.182)LS(0.819)PRPDS(1)PQPR 93.411 3.6101e-07 17897300.0 4394.1 4058.0 4661.7 5017.1 4375.5 4670.2 4854.1 4668.7 5025.4 5172.7 4955.2 True False 4840.185797234547 4399.98190155224 4978.070995079356 5326.994872339186 4068.1799746555416 4632.167439599876 5038.825431765444 4575.579115975701 4814.199914299251 4846.094839221493 4345.741813600849 1.1137766588171987 1.0124812035039992 1.1455054645675242 1.2257964464587643 0.9361301589347477 1.0659094898603045 1.1594856868844472 1.0528879331154766 1.1077970392148633 1.1151363903061824 1.0 12.085386749263575 -10.815976411420195 0.8590774523526858 0.9947756228775009 1.0911904546413813 0.0 0.0805918595782229 0.9904192939903878 1.1782297760693703 0.06483174761767456 0.012965802370973589 1.5276490298021973e-11 10.815976411420195 0.09641483176388044 APVPEPGLDLSLS(ph)PRPDSPQPR ddPTM_A549_MK2206_60min_R1 2 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.091)LS(0.909)PRPDSPQPR;APVPEPGLDLS(0.017)LS(0.982)PRPDS(0.001)PQPR 129.5 2.9901999999999997e-22 21815000.0 4800.9 4254.5 3650.5 3487.6000000000004 6467.8 5303.7 4230.1 4172.1 5988.5 6983.6 6887.5 True False 5611.174549264226 4471.035877561232 4168.19579215711 4342.062156564314 5516.395187842853 5864.934013688872 4998.654414698706 4763.507951520385 4632.114311669429 5405.999909679156 5177.143664670293 1.083835974565634 0.863610548046472 0.8051149556852334 0.838698409355584 1.0655287056234637 1.1328513160088982 0.9655236049967808 0.9201034895027873 0.8947239272650985 1.0442051176927187 1.0 12.337940637906627 -5.2347619836226995 23.04308243412939 0.9469866319541839 1.0838365118846296 0.12800090853030965 0.09698310840545629 4754.056359355602 4106214.2771494924 0.013619083287061151 1.320875622890204 5.8242232860054245e-06 5.2347619836226995 0.13684987993044573 APVPEPGLDLSLS(ph)PRPDSPQPR ddPTM_A549_PD325901_60min_R1 4 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.011)LS(0.983)PRPDS(0.006)PQPR;APVPEPGLDLS(0.058)LS(0.942)PRPDSPQPR;APVPEPGLDLS(0.14)LS(0.86)PRPDSPQPR;APVPEPGLDLS(0.015)LS(0.985)PRPDSPQPR 128.36 3.2982e-22 30362000.0 6696.7 6255.900000000001 6517.9 6820.0 7701.6 7909.200000000001 7361.7 6591.099999999999 7671.2 7224.700000000001 8398.800000000001 True False 7376.544054150018 6783.106648082958 6960.243889316718 7241.255910656203 7160.66618507762 7844.790097486903 7641.853521976809 6459.635339882077 7348.806141316596 6768.531209024988 7365.800844379804 1.001458525691529 0.9208919425589073 0.9449405484031609 0.9830914606089804 0.972150392925882 1.0650288085745045 1.0374776189893373 0.8769766487524376 0.9976927555574387 0.9189131435978831 1.0 12.846626675015424 -6.542689954472792 2.435764763114324 0.996112234375806 0.9529906407049936 0.0 0.05280771296986696 0.4599766053422279 5.45459196930049 0.006772208714223235 0.016791393650811476 2.866223454398427e-07 6.542689954472792 -0.043121593670812364 APVPEPGLDLSLSPRPDS(ph)PQPR ddPTM_A549_MK2206_60min_R1 2 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLSLSPRPDS(1)PQPR;APVPEPGLDLSLSPRPDS(1)PQPR 300.38 1.7671999999999996e-157 184609000.0 9621.8 10979.2 10962.2 10204.3 14452.800000000001 11248.2 11411.5 11265.400000000001 16705.0 16048.0 16183.8 True False 11245.7246095754 11537.994384045194 12516.80479736603 12704.35395808844 12326.812265508388 12438.477058049128 13484.821837151429 12862.30494884058 12921.344172403418 12422.745654179957 12164.915809842629 0.9244391646735843 0.9484647953510543 1.028926545240756 1.0443437633830028 1.013308473169602 1.0224877222730273 1.1085010408572549 1.0573279050919278 1.0621811424250682 1.0211945440780377 1.0 13.570438715350425 -5.7232043087917335 3.417896245742477 1.0368783760682552 0.9289382910743471 0.6719737899901194 0.028040959071237714 0.12156195709913133 2.850386291935111 0.004622017069306764 0.020321072628632548 1.8914535969485941e-06 5.7232043087917335 -0.10794008499390806 APVPEPGLDLSLSPRPDS(ph)PQPR ddPTM_A549_PD325901_60min_R1 2 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLSLSPRPDS(1)PQPR;APVPEPGLDLSLS(0.002)PRPDS(0.998)PQPR 254.29 1.6088999999999995e-110 290800000.0 8043.200000000001 7960.2 8595.6 7858.7 10011.3 9707.3 8513.3 8664.0 10040.2 9487.6 9278.099999999999 True False 8859.739742909112 8631.033990324326 9178.94910554178 8344.114050597342 9308.140825110057 9628.246967245053 8837.278290156515 8491.189723223482 9618.245309736014 8888.55131683605 8136.952518721755 1.0888277549272096 1.0607207023103271 1.128057351253134 1.0254593512004577 1.143934514020279 1.1832743210793084 1.08606732923947 1.0435343826434635 1.1820451560465732 1.0923685859521723 1.0 12.990272856876295 -2.1457572677174674 22.60895014839145 1.0915816906772335 0.05655307356328887 0.0 0.05777809805936196 0.0 0.0 0.009400066297595957 0.0 0.007148957780758267 2.1457572677174674 -1.0350286171139447 APVPGT(ph)PDSLSSGSSR ddPTM_A549_MK2206_60min_R1 2 APVPGTPDSLSSGSSR 16 0 Q9UJZ1;Q9UJZ1-2;A0A087WYB4 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial 1 APVPGT(0.991)PDS(0.009)LSSGSSR;APVPGT(0.997)PDS(0.003)LSSGSSR 192.4 9.450700000000001e-35 103907000.0 7440.6 8226.5 7010.9 6683.299999999999 8476.9 7011.1 6177.200000000001 6402.1 10746.8 10767.5 10877.8 True False 8696.391374795434 8645.193711777527 8005.151042113212 8320.708800024737 7229.959239281525 7753.009948408479 7299.517281028073 7309.617280608966 8312.666959113138 8335.11427164647 8176.542047992823 1.0635781389921701 1.057316609030311 0.9790386932674449 1.0176317508288608 0.8842318912866515 0.9482015628246769 0.8927389155688323 0.893974156520522 1.0166482249245854 1.0193935557015295 1.0 12.997275124776868 -5.751986088957137 6.325392794514092 0.9796663072448243 1.0614660535571845 0.30456498283261746 0.05205933918215258 0.16628022730645933 26.46803840517567 0.008115024409508316 0.029589225109652367 1.7701656582226519e-06 5.751986088957137 0.0817997463123602 APVPGT(ph)PDSLSSGSSR ddPTM_A549_PD325901_60min_R1 2 APVPGTPDSLSSGSSR 16 0 Q9UJZ1;Q9UJZ1-2;A0A087WYB4 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial 1 APVPGT(0.887)PDS(0.113)LSSGSSR;APVPGT(0.997)PDS(0.003)LSSGSSR 175.08 3.4201e-28 126710000.0 13965.099999999999 15393.3 11826.2 15991.599999999999 16708.5 15089.900000000001 14992.6 15337.4 14788.400000000001 15659.7 18325.9 True False 15382.82667143674 16690.547413791042 12628.797048717752 16979.36481244131 15534.952601195775 14967.012857440403 15563.151597265514 15031.483525042468 14166.894976046293 14670.943869498873 16071.930477451522 0.9571237688601518 1.0384905184356927 0.7857672770819665 1.056460817588957 0.9665890866682685 0.93125171729922 0.9683436360740976 0.9352631002312527 0.881468159405123 0.9128302222363271 1.0 13.972255608063005 -7.2475888536005675 22.931142761333607 0.943221019757568 0.9607784987433875 0.022402286653105397 0.07049753054076337 1476.396209853133 2444334.1852676175 0.01066230596622275 0.018384873579768583 5.6547205364313065e-08 7.2475888536005675 0.017557478985819497 APVPSTCSSTFPEELS(ph)PPSHQAK ddPTM_A549_MK2206_60min_R1 3 APVPSTCSSTFPEELSPPSHQAK 23 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1;F5H0Z7;F5H763 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 APVPSTCSSTFPEELS(1)PPSHQAK;APVPSTCSSTFPEELS(1)PPSHQAK;APVPSTCSSTFPEELS(0.999)PPS(0.001)HQAK 283.17 5.770199999999998e-140 177409000.0 17042.8 20925.399999999998 20139.2 17708.0 23123.7 20249.4 18702.9 19166.1 29354.8 29755.7 32294.3 True False 19919.207983544835 21990.413480390147 22995.241390880834 22046.460794942315 19722.234361780167 22392.17806753613 22100.97483574111 21882.953368719547 22705.984669983103 23033.86670376885 24274.734032662345 0.8205736860697618 0.9058971954461549 0.9472911777299015 0.9082060699523288 0.8124593388023671 0.9224479262020674 0.9104517810989657 0.9014703658246229 0.9353752193301709 0.9488823512041832 1.0 14.567167868320132 -9.612698590316388 0.4206752808380725 1.007465066716803 0.8831324549673572 0.38536486453809715 0.0405341380530649 0.6476356662843816 0.25434396519213126 0.03233196623241824 0.01415279885157978 2.439503298594868e-10 9.612698590316388 -0.12433261174944588 APVPTGEVYFADSFDR ddPTM_A549_MK2206_60min_R1 2 APVPTGEVYFADSFDR 16 0 P27824;P27824-2;H0Y9Q7;D6RAU8;D6RB85;D6RDP7;D6RHJ3;D6RD16;D6RAQ8 P27824 CANX Calnexin 0 ; 66.498 0.006945999999999999 3747600.0 2563.5 2926.5 2756.1000000000004 2541.5 3921.1 3018.3 2472.5 2615.0 4491.5 4147.1 4487.2 False True 2996.1561284423456 3075.4463499078515 3146.956423165103 3164.167614092269 3344.311384249762 3337.694502614612 2921.72124544161 2985.68425810163 3474.1824214516582 3210.267229713961 3372.904399580187 0.8883015269615309 0.91180952246694 0.9330108566245734 0.938113637162708 0.9915227317637629 0.9895609561391785 0.8662330440807233 0.8851968227955844 1.0300269470679562 0.9517812690195225 1.0 11.719775712355167 -8.772712712374924 24.999967604665713 1.0141793976754132 0.928049933609319 0.3113474652033057 0.042410795230771334 134.02354962383885 297212.4255880354 0.007120406839117368 0.007613846685843868 1.6876690563923562e-09 8.772712712374924 -0.08612946406609423 APVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A549_MK2206_60min_R1 4 APVQPQQSPAAAPGGTDEKPSGK 23 1 Q13200;F8WBS8;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK 221.5 5.603899999999999e-88 246830000.0 10716.300000000001 9984.599999999999 9330.3 9190.5 13061.1 10475.3 11055.199999999999 9893.900000000001 14269.5 14900.9 15475.400000000001 True False 12524.949451619548 10492.773492325281 10653.476838669629 11442.172912577227 11139.829491934548 11583.789293058626 13063.786739173338 11296.390623797979 11037.481033709104 11534.776340875502 11632.431080688011 1.0767267276066894 0.9020275658237277 0.9158426785228388 0.9836441611567639 0.957652739540295 0.9958184331983587 1.1230487117058137 0.9711117603397692 0.9488541954083326 0.991604958659533 1.0 13.505865019054308 -6.481298799054504 24.534627022745376 0.9861767961071122 0.9571087685029304 0.02777244912882726 0.060697661479537424 1164.3791491228599 687050.8528179094 0.008544035900522684 0.019852555377773643 3.301423215803429e-07 6.481298799054504 -0.029068027604181812 APVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A549_PD325901_60min_R1 2 APVQPQQSPAAAPGGTDEKPSGK 23 1 Q13200;F8WBS8;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK 230.85 1.6204999999999998e-88 424740000.0 8546.3 8499.8 9173.8 7270.6 10546.7 8486.400000000001 8954.400000000001 9022.4 8721.4 9555.9 10640.1 True False 9413.914084546466 9216.107976050691 9796.38923454084 7719.688449269356 9805.93617613979 8417.289572056956 9295.164592035699 8842.44115406413 8354.869887485469 8952.53884317991 9331.435153151113 1.0088388259728196 0.9876410032103714 1.0498266422858566 0.827277725512834 1.0508497369591048 0.902035907007781 0.996113077943518 0.9475971283021931 0.8953467232384003 0.9593957088322845 1.0 13.187883265965027 APVS(ph)GSRSPDREASGSGGR ddPTM_A549_MK2206_60min_R1 1 APVSGSRSPDREASGSGGR 19 2 Q8N5F7 Q8N5F7 NKAP NF-kappa-B-activating protein 1 APVS(0.413)GS(0.413)RS(0.173)PDREASGSGGR 58.015 0.0011449000000000001 22751000.0 453.4 464.76 343.05 457.45 351.73 275.44 433.08 367.28 591.49 908.37 857.89 True False 529.9228354342727 488.4142988495377 391.69964840419027 569.5252705357108 299.9909829339136 304.5868779777255 511.76503012167944 419.34306474782665 457.5184594154381 703.168586109636 644.8522364405081 0.8217740522377199 0.7574049855909853 0.6074254321677105 0.8831872456229796 0.4652088741908081 0.472335925605223 0.7936159653357938 0.6502932626279475 0.7094934832526508 1.090433662742686 1.0 9.332824804300131 -10.389603433781748 0.6749549282656385 1.0102452540090037 0.6759049704500691 0.5204739266941227 0.1309490661128066 0.5475851015342491 0.43797056252500327 0.09850681895437086 0.026626028938263723 4.077524378123731e-11 10.389603433781748 -0.3343402835589345 APVS(ph)PLK ddPTM_A549_MK2206_60min_R1 4 APVSPLK 7 0 Q9UBS0 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 1 APVS(1)PLK;APVS(1)PLK;APVS(1)PLK;APVS(1)PLK 84.615 0.013977000000000002 116272000.0 21055.5 22116.399999999998 21945.6 19144.8 26642.100000000002 20361.1 19391.399999999998 19124.9 29274.7 27826.6 30541.699999999997 True False 24609.153642448895 23242.030293217835 25057.816073514063 23835.27685944274 22723.082382576464 22515.698087395685 22914.56637365274 21835.91314254984 22644.027192089678 21540.551733586988 22957.35298196164 1.0719508325626708 1.0124002672032735 1.0914941323245249 1.0382415114743808 0.9897954002114594 0.9807619417224198 0.9981362568958834 0.951151169723576 0.9863518328912678 0.9382855136004625 1.0 14.486668686199476 -6.6849700684518 4.060842965368329 0.9892247684963156 1.055412728883556 0.6412687724817996 0.02660916023049737 0.09630901616325586 3.06295362772673 0.0029752957290274116 0.006332852562694864 2.0655225065854688e-07 6.6849700684518 0.0661879603872404 APVS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 APVSPLK 7 0 Q9UBS0 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 1 APVS(1)PLK;APVS(1)PLK 85.676 0.013496000000000001 158513000.0 17060.9 17601.4 19560.4 16875.800000000003 21564.8 19447.5 17836.5 18885.2 20270.4 19868.0 22384.0 True False 18792.910008429237 19084.73175011868 20887.886370240543 17918.179838277418 20050.162842521288 19289.126007798077 18515.277768007312 18508.51987084721 19418.505580214824 18613.531089305896 19630.90990386694 0.9573122234505985 0.9721776445196423 1.0640304740090525 0.9127534039951889 1.021356775651635 0.9825895030977887 0.9431696166238392 0.9428253688435175 0.9891801080697601 0.9481746480655673 1.0 14.260839423641029 -8.982946233933598 20.7338529463633 0.9952266925748043 0.9755227611025826 0.0 0.041142370811264595 39.752959622847825 48335.46658879703 0.006525959563502648 0.006625700186302767 1.0400489168958274e-09 8.982946233933598 -0.019703931472221714 APVSGSRS(ph)PDREASGSGGR ddPTM_A549_MK2206_60min_R1 2 APVSGSRSPDREASGSGGR 19 2 Q8N5F7 Q8N5F7 NKAP NF-kappa-B-activating protein 1 APVS(0.195)GS(0.195)RS(0.601)PDREAS(0.004)GS(0.005)GGR;APVS(0.049)GS(0.049)RS(0.901)PDREASGSGGR 66.85300000000001 0.00035482 72449000.0 1463.47 1308.51 1524.7199999999998 1036.99 1289.43 832.69 828.6 850.06 1470.81 2323.92 1912.6100000000001 True False 1710.4679575937262 1375.1075699019038 1740.9482230428134 1291.0525965522506 1099.7565550975928 920.8047031051125 979.1458944278734 970.5586081995687 1137.6738834009377 1798.9448579674638 1437.6561516493737 1.1897615126060324 0.9564926692132121 1.2109628724820487 0.8980259953474065 0.7649649423027055 0.6404902187833335 0.6810709871790503 0.6750978716893327 0.7913393491870246 1.2513039755045712 1.0 10.489502948180203 -6.416029601856318 5.406310405196293 0.8368314278164029 1.1009767467912155 0.34255484916230616 0.17473580533954958 0.18757029195734867 7.898348981345637 0.021670516876903002 0.05103067529230668 3.83681092593426e-07 6.416029601856318 0.26414531897481264 APVSGSRS(ph)PDREASGSGGR ddPTM_A549_PD325901_60min_R1 4 APVSGSRSPDREASGSGGR 19 2 Q8N5F7 Q8N5F7 NKAP NF-kappa-B-activating protein 1 APVS(0.061)GS(0.079)RS(0.849)PDREAS(0.007)GS(0.004)GGR;APVS(0.003)GS(0.061)RS(0.935)PDREAS(0.001)GSGGR;APVS(0.075)GS(0.075)RS(0.849)PDREAS(0.001)GSGGR;APVS(0.001)GS(0.038)RS(0.961)PDREASGSGGR 142.56 2.9406e-21 238401000.0 6372.000000000001 6018.9 6331.4 5283.92 6837.9 7127.799999999999 6707.4 6840.1 8644.2 6084.139999999999 7536.6 True False 7018.8807491815305 6526.133826331386 6761.086877801113 5610.295737746995 6357.6294934743755 7069.753560014561 6962.653777430115 6703.668839545359 8280.914335015243 5699.986362074168 6609.645978443685 1.0619147791080643 0.987365109661749 1.022912104498687 0.8488042712187743 0.9618714094837725 1.0696115318538155 1.0534079737610318 1.014225097896062 1.2528529307049328 0.8623739275392014 1.0 12.690357285771526 -7.7970530693446705 1.4256773656006974 1.1143692801952814 0.9767312806401666 0.0 0.11049211806602599 0.42704206163949865 1.765250454144672 0.018065507327972376 0.028291083593333197 1.5956841480145454e-08 7.7970530693446705 -0.1376379995551148 APVSSTESVIQS(ph)NT(ph)PTPPPSQPLNETAEEESR ddPTM_A549_MK2206_60min_R1 1 APVSSTESVIQSNTPTPPPSQPLNETAEEESR 32 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 2 APVS(0.011)S(0.011)T(0.011)ES(0.034)VIQS(0.633)NT(0.633)PT(0.633)PPPS(0.032)QPLNET(0.002)AEEESR 47.96 0.0018113 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 APVSSTESVIQSNT(ph)PTPPPSQPLNETAEEESR ddPTM_A549_MK2206_60min_R1 2 APVSSTESVIQSNTPTPPPSQPLNETAEEESR 32 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 APVSSTESVIQS(0.029)NT(0.819)PT(0.152)PPPSQPLNETAEEESR;APVSSTESVIQS(0.02)NT(0.489)PT(0.489)PPPS(0.001)QPLNETAEEESR 152.21 1.0593999999999999e-40 32590000.0 734.8699999999999 867.4300000000001 919.79 693.96 914.13 599.31 1050.98 573.14 1597.85 1562.8200000000002 1710.4299999999998 True False 858.8980901534721 911.5784819069087 1050.2300527785749 863.9802311530482 779.6626879406889 662.7285864102188 1241.9294618945291 654.3843501676361 1235.9395262421308 1209.777876574371 1285.6830255335042 0.668048090466984 0.7090227247331371 0.8168654574425712 0.6720009629080487 0.6064190569966977 0.5154681000281655 0.9659686230820236 0.5089779807088097 0.9613096709659584 0.9409612264829927 1.0 10.328319286692086 -8.855628653315458 8.367820726587238 0.9827438108916715 0.6893722314417362 0.5147930550788631 0.12277279705435354 0.13018831060924269 10.331869805974243 0.01978874304676837 0.02103465682213752 1.39434854132537e-09 8.855628653315458 -0.2933715794499353 APVSSTESVIQSNT(ph)PTPPPSQPLNETAEEESR ddPTM_A549_PD325901_60min_R1 2 APVSSTESVIQSNTPTPPPSQPLNETAEEESR 32 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 APVSSTESVIQS(0.006)NT(0.953)PT(0.042)PPPSQPLNETAEEESR;APVSSTESVIQS(0.01)NT(0.98)PT(0.01)PPPSQPLNETAEEESR 207.48 1.5475999999999995e-89 52498000.0 2053.22 1608.5 1641.99 1971.25 2198.97 2343.6 1834.44 2264.6000000000004 1931.88 2018.2199999999998 2282.5 True False 2261.661382899324 1744.0539400312418 1753.4253154879884 2093.009635466428 2044.5219332346696 2324.514498618103 1904.2506180440857 2219.430776455667 1850.6898018936681 1890.789244768421 2001.766969959625 1.1298325014049668 0.8712572273417115 0.8759387789895217 1.0455810625692576 1.021358611624962 1.1612313188807326 0.9512848631339411 1.108735836769468 0.9245280942621388 0.9445601177076859 1.0 10.967058321347858 -5.222658182196128 22.363415001265032 0.982996869818942 1.1298340338324167 0.17070806398591443 0.08691905290871937 6774.980118096291 3906528.732805082 0.011824932805625589 3.6223310291248514 5.988827690287297e-06 5.222658182196128 0.14683716401347469 APVSSTESVIQSNTPT(ph)PPPSQPLNETAEEESR ddPTM_A549_MK2206_60min_R1 3 APVSSTESVIQSNTPTPPPSQPLNETAEEESR 32 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 APVSSTESVIQSNT(0.009)PT(0.989)PPPS(0.001)QPLNETAEEESR;APVSSTESVIQSNT(0.007)PT(0.993)PPPSQPLNETAEEESR;APVSSTESVIQS(0.042)NT(0.179)PT(0.775)PPPS(0.003)QPLNET(0.001)AEEESR 172.0 1.8512999999999996e-62 105997000.0 2952.81 3353.9700000000003 2761.6299999999997 2775.2100000000005 3984.36 3796.56 2791.9900000000002 2741.29 4603.84 4027.17 4127.62 True False 3451.1721387266757 3524.6727470358564 3153.2706603190913 3455.1365745839125 3398.2659220497767 4198.309459247433 3299.258442896066 3129.876252348535 3561.0775908217743 3117.4295000089646 3102.618037483325 1.112341930921693 1.1360317978086916 1.0163257681815234 1.113619702084415 1.0952898104100062 1.3531506000825266 1.0633788636039274 1.008785552889817 1.1477653864574082 1.0047738594782534 1.0 11.599270382641395 -10.943163955458662 0.8113081118142926 0.9865954419742204 1.1187570756595264 0.20515383410300236 0.08649726128555262 1.1235375587625187 1.0778104084735007 0.10194289910367055 0.015887263140662158 1.1398194001160325e-11 10.943163955458662 0.13216163368530598 APVSSTESVIQSNTPT(ph)PPPSQPLNETAEEESR ddPTM_A549_PD325901_60min_R1 2 APVSSTESVIQSNTPTPPPSQPLNETAEEESR 32 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 APVSSTESVIQS(0.006)NT(0.16)PT(0.826)PPPS(0.008)QPLNETAEEESR;APVSSTESVIQSNT(0.015)PT(0.983)PPPS(0.002)QPLNETAEEESR 140.35 2.0623e-31 121591000.0 2586.2 3155.6 2611.2 2790.3 2776.5 3314.7 3105.8999999999996 2879.4 3201.2 3134.0 3434.2 True False 2848.749120140185 3421.5334865791647 2788.411734421182 2962.6504937689147 2581.488218405008 3287.706182185284 3224.0967241136946 2821.9681081543986 3066.6646964728693 2936.1187051482134 3011.8151711874457 0.9458578824466941 1.1360370049634163 0.9258243205282135 0.9836760642256984 0.8571203980579007 1.091602902341801 1.0704829283539847 0.9369658985553893 1.0182114512902858 0.9748668288932922 1.0 11.556417522204118 APYAPGTLPDS(ph)PPDSGSEAYSPQQVNEPHLLR ddPTM_A549_PD325901_60min_R1 1 APYAPGTLPDSPPDSGSEAYSPQQVNEPHLLR 32 0 Q9Y2G1-2;Q9Y2G1 Q9Y2G1-2 MYRF Myelin regulatory factor;Myelin regulatory factor, N-terminal;Myelin regulatory factor, C-terminal 1 APY(0.001)APGT(0.021)LPDS(0.841)PPDS(0.113)GS(0.018)EAY(0.003)S(0.003)PQQVNEPHLLR 58.672 0.00072204 3780900.0 568.21 707.67 496.39 537.87 731.85 616.95 873.38 838.13 785.1 583.03 768.69 True False 625.8942609059061 767.3078344680813 530.0780104355587 571.0930083086001 680.4473807454369 611.925763749121 906.6169538318738 821.4128396497342 752.1049772587933 546.2173862994777 674.1460031273887 0.9284253826357481 1.1381923662062987 0.7862955620540756 0.8471354953664016 1.0093472001447994 0.9077050978725296 1.3448376903905737 1.2184494691642005 1.1156410833406265 0.8102360375431356 1.0 9.396917266607284 APYS(ph)PTTSK ddPTM_A549_MK2206_60min_R1 2 APYSPTTSK 9 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 APYS(0.778)PT(0.204)T(0.014)S(0.003)K;APYS(0.822)PT(0.131)T(0.039)S(0.008)K 101.3 0.00073954 93976000.0 18809.5 19781.0 18585.0 17203.3 25053.0 22681.5 20652.3 21904.4 31080.0 29868.0 31563.0 True False 21984.08375187685 20787.768408517743 21220.632460550583 21418.10927228547 21367.736887508432 25081.641275238813 24404.555582298774 25009.415779411618 24040.429624561395 23120.79805577309 23725.036005515594 0.9266196159519418 0.8761954419662421 0.8944404744261384 0.9027640365774867 0.9006408623591071 1.0571803250122713 1.0286414560814663 1.0541360516206353 1.0132937045479078 0.9745316319181969 1.0 14.534122656255871 -7.247573711950061 24.647458823844644 1.015457034598155 0.8986322804177189 0.8568218613856533 0.024596004359074733 176.186758674166 313187.51537773316 0.003445263968879123 0.005947277736637596 5.65491769135328e-08 7.247573711950061 -0.11682475418043614 APYS(ph)PTTSK ddPTM_A549_PD325901_60min_R1 1 APYSPTTSK 9 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 APYS(0.873)PT(0.111)T(0.015)S(0.001)K 115.57 0.00020308 87703000.0 14115.0 13711.0 13533.0 14836.0 16863.0 14530.0 14061.0 15044.0 14289.0 16367.0 17541.0 True False 15547.944409086203 14866.474088758685 14451.430760539923 15752.386024999338 15678.601054191857 14411.672497406144 14596.09904947444 14743.935618210302 13688.483021336015 15333.584826790311 15383.56820156049 1.0106851807962887 0.9663865947076341 0.939406941952127 1.0239747904131522 1.019178440838026 0.9368224789320491 0.9488110208393544 0.9584210519321971 0.8898119631274798 0.9967508594810202 1.0 13.909102553176478 -7.279129802719522 24.6232876756463 0.9470002297719659 0.9893702335218916 0.18558258809374262 0.03612706151493139 924.7565413749489 1287164.9120279502 0.0067057185320269445 0.010734528832719427 5.2586007289192186e-08 7.279129802719522 0.04237000374992572 APYS(ph)PTTSKEK ddPTM_A549_PD325901_60min_R1 1 APYSPTTSKEK 11 1 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 APY(0.001)S(0.867)PT(0.114)T(0.016)S(0.002)KEK 73.91 0.00040585 7464200.0 2849.0 2698.5 3028.5 3363.1 2983.0 4532.6 3867.2 4297.1 4358.5 4259.8 4008.6 True False 3138.228382677051 2925.9120653865743 3234.0322218499327 3570.8310488457314 2773.4843707913365 4495.688008378739 4014.3684122130385 4211.390969490261 4175.327402092029 3990.8355010179826 3515.56761260905 0.8926662003089851 0.8322730175612048 0.9199175149556638 1.0157196340182655 0.7889150989000657 1.27879435236983 1.1418834323694909 1.1979263190346698 1.1876680701906182 1.1351895172501651 1.0 11.779541925819014 -7.252388828775056 24.997898459999295 1.1161176535549533 0.8953546994135385 0.6889983837926041 0.08696590192279637 412.44258441451007 1139178.21346613 0.01525463721804838 0.026179112434723747 5.592566684451663e-08 7.252388828775056 -0.22076295414141478 APYSPT(ph)TSK ddPTM_A549_PD325901_60min_R1 1 APYSPTTSK 9 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 APYS(0.266)PT(0.701)T(0.028)S(0.005)K 97.456 0.00091389 65688000.0 10635.0 11385.0 9954.4 11387.0 12101.0 12342.0 10637.0 10767.0 11318.0 12632.0 13258.0 True False 11714.657370926789 12344.45390566097 10629.965444669966 12090.349128246658 11251.067506183686 12241.490843977055 11041.796855789738 10552.243738451903 10842.343819405201 11834.413364209397 11627.35004938651 1.0075087892915793 1.061673885556778 0.9142208155357662 1.0398198279826087 0.9676381512894524 1.0528186381232196 0.9496400133212066 0.907536428647271 0.9324862305988003 1.017808298016607 1.0 13.505234714002263 -7.801858116071278 24.99957267799957 0.9605413050684608 1.0051997906233807 0.18591820287700445 0.04757841166368306 201.88846313434246 124870.28267377595 0.007270058204935716 0.01004512301085451 1.578126759216525e-08 7.801858116071278 0.04465848555491991 AQAAAPAS(ph)VPAQAPK ddPTM_A549_PD325901_60min_R1 1 AQAAAPASVPAQAPK 15 0 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 1 AQAAAPAS(1)VPAQAPK 126.48 8.8572e-22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AQAAAPASVPAQAPK ddPTM_A549_MK2206_60min_R1 2 AQAAAPASVPAQAPK 15 0 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 0 ; 241.17 3.5407999999999996e-64 6166500.0 1884.9700000000003 2564.51 2157.58 2056.23 2785.5 2227.58 2151.88 1736.5700000000002 3491.7 2907.8999999999996 3172.6 False True 2203.106852908121 2695.0326050921526 2463.557287287314 2560.0064423076715 2375.756639929539 2463.3010370520683 2542.84874161411 1982.734115522581 2700.835525099133 2251.0033703757404 2384.7558606944444 0.9238290968143685 1.1301083895050603 1.0330438129502792 1.073487850266649 0.9962263555304629 1.0329363595042182 1.0662931092969947 0.8314201668195946 1.1325417287422646 0.9439135500102073 1.0 11.219625862593512 AQAAAPASVPAQAPK ddPTM_A549_PD325901_60min_R1 2 AQAAAPASVPAQAPK 15 0 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 0 ; 206.58 5.949e-39 4538700.0 2349.96 2998.1000000000004 2343.96 3579.3 3076.3 2880.5 2431.4 2723.6 3603.3 3004.1000000000004 3612.5 False True 2588.5262092508833 3250.7604088328653 2503.0352209765147 3800.3852318199038 2860.2313006588633 2857.042163026731 2523.9282575131324 2669.275661377135 3451.865831813287 2814.4206133170887 3168.185401524271 0.8170374776695507 1.0260638178778507 0.7900532651189729 1.1995463491472027 0.9027979547165247 0.9017913413944009 0.7966479033388718 0.842525080790063 1.089540350180432 0.8883383567019216 1.0 11.629441048751678 -8.768373036309871 24.999766025381966 1.0422829451817135 0.9148763385486519 0.04289922168629823 0.12277205922641041 184.09602401230026 663768.8395063262 0.0192800662404713 0.020744342405172575 1.7046175823958567e-09 8.768373036309871 -0.12740660663306158 AQARPLT(ph)R ddPTM_A549_MK2206_60min_R1 2 AQARPLTR 8 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;E9PGF6;A0A1W2PRT1 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AQARPLT(1)R;AQARPLT(1)R 87.568 0.001072 123881000.0 5571.3 6178.9 6007.1 5680.4 7212.3 5070.0 4173.8 4729.3 7965.3 7105.200000000001 7024.5 True False 6511.599234792602 6493.379617784252 6858.997108085734 7072.098255002846 6151.380224076035 5606.504034806377 4932.125433457713 5399.69275787382 6161.172267970366 5500.130385224285 5280.122783662647 1.2332287527366401 1.2297781479392056 1.2990222745024642 1.3393814016758838 1.165007041712963 1.061813193464666 0.9340929435804637 1.0226453018443316 1.166861552355145 1.0416671374086923 1.0 12.366355762980966 -7.023513272694046 3.666761024351679 1.063403048939961 1.2733714144101418 0.7550614443619694 0.062333892920950824 0.12200967058361291 3.5070275260016563 0.011862664168389285 0.022145713721077265 9.47298233199838e-08 7.023513272694046 0.20996836547018072 AQARPLT(ph)R ddPTM_A549_PD325901_60min_R1 2 AQARPLTR 8 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;E9PGF6;A0A1W2PRT1 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AQARPLT(1)R;AQARPLT(1)R 99.28299999999999 0.00095576 164253000.0 5789.5 5093.5 6493.2 6335.9 6181.2 6071.4 6880.0 6635.2 6688.7 7572.299999999999 7296.799999999999 True False 6377.245777995365 5522.747120639805 6933.8675987835495 6727.254153127074 5747.053835982363 6021.956531366253 7141.822164880455 6502.855730786293 6407.597199580807 7094.183685703199 6399.339858226243 0.99654744384259 0.8630182554752748 1.0835285751967336 1.051241894033695 0.8980697952140521 0.9410277723607896 1.116024828045312 1.016176023598275 1.0012903426818234 1.1085805478175605 1.0 12.643707372214651 AQAS(ph)PSEENKANK ddPTM_A549_PD325901_60min_R1 1 AQASPSEENKANK 13 1 Q5T2D3 Q5T2D3 OTUD3 OTU domain-containing protein 3 1 AQAS(0.857)PS(0.143)EENKANK 45.33 0.013897999999999999 2987200.0 1182.4 1583.8 1418.9 1322.0 1573.7 1394.8 1271.4 1681.7 1348.1 1232.3 1897.6 True False 1302.4363775631261 1717.2723843465824 1515.1950865388376 1403.6569375201623 1463.1687409702731 1383.441211244466 1319.7838227367758 1648.157174231872 1291.4440451440316 1154.4923676943667 1664.2072298774974 0.7826167043265392 1.0318861458575632 0.9104605840766425 0.8434387931504694 0.879198644677188 0.8312914319848865 0.7930405535096283 0.9903557349364437 0.7760115579110272 0.6937191156051816 1.0 10.700619376134917 -11.09575068686694 1.4326783770476041 0.9999125904504401 0.8633039915557028 0.0 0.11960260452558423 0.43826284627742007 1.6093088819048265 0.056840266024607344 0.012449711859995686 8.021384105894739e-12 11.09575068686694 -0.1366085988947373 AQATGS(ph)PHT(ph)SPTHGGGR ddPTM_A549_MK2206_60min_R1 2 AQATGSPHTSPTHGGGR 17 0 E7EVB6;E9PEY4;O60941-6;O60941-5 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 2 AQAT(0.063)GS(0.937)PHT(0.536)S(0.443)PT(0.022)HGGGR;AQAT(0.041)GS(0.957)PHT(0.527)S(0.454)PT(0.02)HGGGR 67.76 0.00093162 35424400.0 985.12 674.78 926.73 666.49 754.75 642.78 795.76 794.37 1030.26 1133.0900000000001 1153.3 True False 1151.3841721283873 709.1234197815891 1058.154249134573 829.7800799198728 643.7272748112794 710.7985529571681 940.3392915157193 906.9743801560966 796.9077549871499 877.1241820348176 866.9037805392743 1.3281568242927104 0.8179955327227494 1.220613259381944 0.9571766769821815 0.7425590812521735 0.8199278500262187 1.0847101058098547 1.0462226610569116 0.9192574457241587 1.011789545420122 1.0 9.75972806437265 -6.415643125263544 11.848453418962075 0.9495949485033504 1.091691062587757 0.2083443398486764 0.14833819627485678 0.8756039523411765 92.71064368475567 0.019494785420509128 0.0453113152932909 3.840226805381073e-07 6.415643125263544 0.1420961140844066 AQATGS(ph)PHT(ph)SPTHGGGR ddPTM_A549_PD325901_60min_R1 2 AQATGSPHTSPTHGGGR 17 0 E7EVB6;E9PEY4;O60941-6;O60941-5 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 2 AQAT(0.034)GS(0.963)PHT(0.492)S(0.433)PT(0.078)HGGGR;AQAT(0.166)GS(0.717)PHT(0.587)S(0.499)PT(0.031)HGGGR 64.295 0.0038897 50339000.0 452.81 784.0699999999999 823.3199999999999 664.19 831.23 772.8499999999999 665.35 584.79 696.4100000000001 659.55 853.42 True False 498.7789378588964 850.146330593904 879.1954462253551 705.2155078150654 772.8472723878251 766.5561658376008 690.6702583434903 573.1259046911197 667.1423095310108 617.9059004404929 748.4547502751121 0.666411613628691 1.1358687085377075 1.1746808286034476 0.9422286484999218 1.032590510119345 1.0241850500058087 0.9227949426329625 0.7657455637504522 0.8913595768959807 0.8255754943279698 1.0 9.547771286917417 -7.7650744219502 24.617465099077734 0.9289963469510412 1.0096938558116564 0.10023266580583312 0.1382068594303434 166.30179628003333 1126243.8340425605 0.02075342995634183 0.02928850623852302 1.7176140266625533e-08 7.7650744219502 0.08069750886061522 AQATGS(ph)PHTS(ph)PTHGGGR ddPTM_A549_MK2206_60min_R1 1 AQATGSPHTSPTHGGGR 17 0 E7EVB6;E9PEY4;O60941-6;O60941-5 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 2 AQAT(0.031)GS(0.968)PHT(0.177)S(0.705)PT(0.119)HGGGR 70.917 0.00039842 23932000.0 345.32 427.61 340.26 204.21 243.6 257.57 343.73 226.9 457.29 443.24 439.19 True False 403.60157373657495 449.3735225300175 388.51398445127484 254.24145916733528 207.7667626949687 284.82588643887135 406.1812916868125 259.063769852107 353.71454514207454 343.11177615645073 330.1270019726384 1.2225645625013923 1.3612140777483646 1.176862183734597 0.7701322753005442 0.6293540408796636 0.8627767033200098 1.2303788822474981 0.7847397162428377 1.071449905728678 1.0393326632060484 1.0 8.366877335056877 -6.02951899119344 8.84254183014962 0.9752980914144037 1.2865944400742217 0.4289716911419069 0.16499065960669404 0.25804625802876946 74.4012885815677 0.024192594013017026 0.06589669042602048 9.34288512012183e-07 6.02951899119344 0.31129634865981803 AQATGS(ph)PHTS(ph)PTHGGGR ddPTM_A549_PD325901_60min_R1 2 AQATGSPHTSPTHGGGR 17 0 E7EVB6;E9PEY4;O60941-6;O60941-5 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 2 AQAT(0.018)GS(0.973)PHT(0.099)S(0.865)PT(0.044)HGGGR;AQAT(0.053)GS(0.947)PHT(0.109)S(0.856)PT(0.035)HGGGR 84.689 3.3159e-05 58226200.0 847.3 1089.0900000000001 1049.78 1262.1 1130.35 857.8299999999999 1096.54 1043.28 1082.76 1141.54 1077.99 True False 933.3172722507072 1180.8714364616878 1121.0243836399611 1340.0570505629307 1050.9581154958053 850.8441168926303 1138.2694297497114 1022.4709619626727 1037.2553625993264 1069.4629695835647 945.4040639416334 0.9872152107739698 1.2490653271981191 1.1857621797881017 1.417443717108521 1.1116496697867893 0.8999793308960845 1.204003106358537 1.0815174177480553 1.0971555995589244 1.131223156715339 1.0 9.884787256095827 -6.989991684603438 24.98358658662827 1.0520489909436173 1.2176487725791538 0.23043866829497406 0.11798200015708517 191.65490676029816 478420.96873301757 0.015960170472683433 0.030137786309450885 1.0233125853652777e-07 6.989991684603438 0.16559978163553657 AQATGS(ph)PHTSPTHGGGR ddPTM_A549_PD325901_60min_R1 1 AQATGSPHTSPTHGGGR 17 0 E7EVB6;E9PEY4;O60941-6;O60941-5 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 1 AQAT(0.074)GS(0.912)PHT(0.01)S(0.003)PT(0.001)HGGGR 53.033 0.0046035 2174500.0 213.95 0.0 184.74 111.77 156.34 318.6 162.56 326.39 201.47 211.96 314.39 True False 235.67004649833447 0.0 197.27756733186627 118.67377905191255 145.35921774372025 316.0054272314933 168.74630975624524 319.8798954019983 193.00291653079748 198.5768094266801 275.7220230824127 0.8547378401756947 0.0 0.7154944139986251 0.43041095421108677 0.527194803370033 1.1461015108576944 0.6120160728176847 1.1601535917440549 0.6999909342501427 0.72020655878956 1.0 8.107070695870897 -7.121437422571495 7.418276124675073 0.8773787545542969 0.47986841778126665 0.3564301995246959 0.256337419940752 0.20912291357352414 11.891820386535517 0.03443758242738145 0.05986776160125212 7.560709946498259e-08 7.121437422571495 -0.39751033677303027 AQAVS(ph)EDAGGNEGR ddPTM_A549_MK2206_60min_R1 3 AQAVSEDAGGNEGR 14 0 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 AQAVS(1)EDAGGNEGR;AQAVS(1)EDAGGNEGR;AQAVS(1)EDAGGNEGR 156.57 5.677000000000001e-19 23471400.0 2430.1400000000003 2616.89 2396.26 2095.37 2913.53 2092.85 1940.28 2442.62 3466.1 3359.33 3217.7200000000003 True False 2840.288220781307 2750.078523359084 2736.085700291576 2608.7357440647347 2484.953596529853 2314.3139978786044 2292.803760608875 2788.8688652100204 2681.0338842243314 2600.455019843989 2418.6713194457934 1.1743175676437596 1.1370203554525251 1.131235020771038 1.0785821633104296 1.027404416859438 0.956853450599852 0.9479600399504637 1.1530582277913863 1.1084738396115166 1.0751584967071295 1.0 11.239999015111218 -6.2904374339065905 2.2210705172751593 1.0437471782849987 1.1531932939179408 0.4044609784981029 0.05792581574274481 0.29523827636384803 2.8091053965936426 0.009668416683910984 0.029375821982043367 5.123450753029932e-07 6.2904374339065905 0.10944611563294204 AQAVS(ph)EDAGGNEGR ddPTM_A549_PD325901_60min_R1 3 AQAVSEDAGGNEGR 14 0 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 AQAVS(1)EDAGGNEGR;AQAVS(1)EDAGGNEGR;AQAVS(1)EDAGGNEGR 134.85 5.463e-09 27333310.0 2872.7799999999997 2937.1 2643.7 3276.91 3363.41 2740.8900000000003 2889.7799999999997 2991.45 2941.52 2976.79 3304.4300000000003 True False 3164.422510771139 3184.6197247533455 2823.117379859558 3479.317288297423 3127.1756847345914 2718.569100579182 2999.7521592482913 2931.783183002874 2817.8981438113437 2788.8349713778393 2898.00605850764 1.0919309507588446 1.0989002991916796 0.9741585500043272 1.2005900671198513 1.0790783806521664 0.9380826146302603 1.035109002081606 1.0116552980957632 0.9723575751468413 0.9623288961700724 1.0 11.50084489562656 -7.162085404717531 7.151692579977286 0.9897332451058267 1.09010541204638 0.4705814044261557 0.05405816274104123 0.17800409807494832 11.239365874927033 0.007376960941739703 0.012824362138578268 6.88516885062931e-08 7.162085404717531 0.10037216694055329 AQAVS(ph)EEEEEEEGK ddPTM_A549_MK2206_60min_R1 2 AQAVSEEEEEEEGK 14 0 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK 204.82 8.2401e-32 219900000.0 3170.3 3271.6000000000004 3384.1 2514.2 4056.7 3135.5 2839.6000000000004 3059.3 4390.4 3540.5 3667.0 True False 3705.3691336066954 3438.110465866572 3864.016266330331 3130.179112866726 3459.9648038779965 3467.2965288235487 3355.5185636222423 3492.965143713314 3395.9814100281305 2740.6985910159583 2756.3826959486005 1.3442868942157193 1.2473269662155375 1.4018431736673422 1.1356112188149856 1.2552555960257399 1.2579155042294623 1.2173630927789043 1.2672279320456337 1.2320427838339096 0.9943098957355613 1.0 11.428560490272412 -14.601396156234882 0.18897252656289812 3.6213802389297544e-15 1.3130086619946377 0.7437989105345397 0.061117170456822224 15.183399486207595 0.1981419813436454 5.621170543217721 0.059408323662002736 2.5038242639933434e-15 14.601396156234882 1.3130086619946342 AQAVS(ph)EEEEEEEGK ddPTM_A549_PD325901_60min_R1 2 AQAVSEEEEEEEGK 14 0 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK 234.77 3.0396e-57 285900000.0 9320.7 9207.5 9665.599999999999 8811.900000000001 9510.5 8723.3 9215.099999999999 9220.5 9813.2 9083.8 9385.0 True False 10266.930602463322 9983.448338724058 10321.565739974487 9356.191049723086 8842.515289443847 8652.2603370009 9565.785673196204 9036.589894157687 9400.78533032224 8510.24731774899 8230.704496416693 1.2473939025429863 1.212951861298196 1.2540318686532932 1.1367424324122417 1.0743327370449895 1.051217467565229 1.1622074000300642 1.0979120800767228 1.1421604717330032 1.0339634136365847 1.0 13.006800206194512 -2.000000000000035 0.04617382059990255 0.7133824266607763 1.9140395599630042 0.6528735659735225 0.04822879753520639 238.8807639280417 0.8126744033574353 5.206662444868511 20.89354174612742 0.009999999999999192 2.000000000000035 1.200657133302228 AQAVS(ph)EEEEEEEGKS(ph)SSPKKK ddPTM_A549_PD325901_60min_R1 1 AQAVSEEEEEEEGKSSSPKKK 21 3 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 AQAVS(1)EEEEEEEGKS(0.371)S(0.332)S(0.297)PKKK 80.847 4.3882e-05 20230000.0 885.8 882.59 1232.3 1627.9 1137.7 1683.7 1635.9 1769.0 1503.7 1414.1 1747.7 True False 975.7257639085059 956.968956749874 1315.9312884218837 1728.4516857708566 1057.7918768519287 1669.9885054289552 1698.1550696988286 1733.7159072463458 1440.5047182576086 1324.8134846681842 1532.7439795831046 0.6365875690302149 0.6243501651268353 0.8585460494059859 1.1276845375318212 0.6901295264846778 1.0895417158207858 1.1079182774938803 1.1311190455420377 0.9398208294704348 0.8643410134473495 1.0 10.581901022603397 -5.894303960853324 3.5565421339217527 0.989177449379665 0.6283027864664591 0.5523986792449449 0.1252898464573982 0.11610263141982949 2.8151880637954823 0.01594572829894909 0.056896479491700194 1.2755457473012358e-06 5.894303960853324 -0.3608746629132059 AQAVS(ph)EEEEEEEGKSS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 AQAVS(1)EEEEEEEGKS(0.02)S(0.598)S(0.382)PK 129.57 5.335e-17 92015000.0 3254.9 3923.0 3445.1 3018.3 4947.8 3444.7 3893.6 3013.5 5103.3 5594.1 5430.3 True False 3804.2475453352777 4122.663943512218 3933.6669835804582 3757.7836354966353 4219.985174311025 3809.215867593202 4601.016720425256 3440.672853456695 3947.410698295502 4330.38892472882 4081.806641344336 0.9320009200833568 1.0100096123500906 0.9637073309001505 0.9206177474048637 1.0338522975505717 0.9332181071513577 1.127201047159333 0.8429289174568826 0.9670743974769537 1.0609000634343162 1.0 11.994992126959039 -6.743691181052951 24.960402102218765 0.9831209400384979 0.9609088751613524 0.045181601713152886 0.07195111665160613 915.3098708069199 1287248.6914025107 0.008906126841123017 0.01850668076246933 1.8043002900922528e-07 6.743691181052951 -0.022212064877145554 AQAVS(ph)EEEEEEEGKSS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 AQAVS(1)EEEEEEEGKS(0.148)S(0.464)S(0.388)PK 180.06 1.0455999999999999e-35 222970000.0 11390.0 11218.0 11419.0 9694.0 12864.0 11820.0 11302.0 10023.0 11483.0 10284.0 13317.0 True False 12546.304415125174 12163.380229574426 12193.96200802523 10292.776363328621 11960.47701839079 11723.741838908512 11732.10379469171 9823.083402108607 11000.409443208155 9634.666484921581 11679.093423418333 1.0742532797937854 1.0414661299981576 1.0440846361905547 0.8812992575853587 1.0240929312551126 1.0038229350405445 1.0045389114849517 0.841082697601498 0.9418889843924602 0.8249498600296005 1.0 13.511640670522524 -6.037853920614345 23.600198434607414 0.9658178005975576 1.0540886752329526 0.3075798153596456 0.06821934087579279 232.41355699109764 144899.45988679354 0.007566372206295295 0.02002596592881162 9.165287220793582e-07 6.037853920614345 0.08827087463539496 AQAVS(ph)EEEEEEEGKSSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 AQAVS(1)EEEEEEEGKS(0.002)S(0.24)S(0.758)PK 164.13 1.6304999999999998e-27 246750000.0 6996.5 6798.5 7087.7 6544.5 8196.7 5868.6 6948.9 7097.8 7229.1 6987.6 7851.2 True False 7706.779529448922 7371.433454337822 7568.713943802473 6948.738901362096 7620.9920690798945 5820.808067328129 7213.344192083983 6956.228810883613 6925.286066872428 6546.4017434887255 6885.552172857402 1.119268191711446 1.0705653329293976 1.0992167009696143 1.009176711891571 1.1068091385788303 0.8453654726883842 1.0476057708949944 1.0102644836974464 1.0057706183930544 0.9507446286289725 1.0 12.74935663765714 -6.496427298387553 1.3691079702676296 0.9991973617473308 1.0978719862131217 0.3545341409026629 0.06075743182005005 0.37647395854988547 1.3534245112177419 0.008082546160288142 0.02708309319880574 3.188399274320016e-07 6.496427298387553 0.0986746244657909 AQAVS(ph)EEEEEEEGKSSSPK ddPTM_A549_MK2206_60min_R1 4 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(1)EEEEEEEGKSSSPK;AQAVS(1)EEEEEEEGKSSSPK;AQAVS(1)EEEEEEEGKSSSPK;AQAVS(1)EEEEEEEGKSSSPK 272.79 5.3646e-112 374027000.0 49706.5 54885.3 53324.100000000006 46534.4 65821.8 44307.0 45505.4 42856.799999999996 73736.0 77195.0 75560.0 True False 58095.74199275187 57678.7273359294 60886.25920848241 57935.330089008625 56139.50041361122 48995.53733139372 53773.1421485616 48931.882643445504 57034.91373219618 59756.59588574409 56796.366650088894 1.0228777898887118 1.0155355128837122 1.0720097569548863 1.0200534559884202 0.9884347137815259 0.8626526699013244 0.9467708115881289 0.8615319170838003 1.0042000412381469 1.0521200458806208 1.0 15.793511020836476 -6.736092521614473 4.012397394370133 0.9752788819305992 1.0356761176610978 0.2526454156802873 0.05707134339506503 0.29726302169677377 10.463106005227923 0.008654614559326684 0.018066101013645516 1.8361471309309605e-07 6.736092521614473 0.0603972357304986 AQAVS(ph)EEEEEEEGKSSSPK ddPTM_A549_PD325901_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(1)EEEEEEEGKSSSPK 276.23 9.606199999999999e-127 248810000.0 45159.0 47158.0 50707.0 48228.0 57031.0 53128.0 54151.0 62024.0 55559.0 57808.0 58199.0 True False 49743.508435701304 51132.17016101538 54148.28194596155 51206.93402626501 53025.339306269074 52695.34318253227 56211.745937564185 60786.882663113276 53224.04844162692 54157.993014424974 51040.8919538577 0.9745814881266325 1.0017883348754995 1.0608804014419069 1.00325311854968 1.0388795586528026 1.032414230342413 1.101308064686273 1.1909447569620493 1.0427726946806268 1.0610706619975452 1.0 15.639365920371734 -6.839922434155639 6.367279745424733 1.0421305335940885 1.013215557542157 0.10860813847701412 0.05383187154553359 0.6045525716491185 38.96237984509459 0.008969258912270621 0.01713585414443146 1.4456979521728052e-07 6.839922434155639 -0.028914976051931385 AQAVSEDAGGNEGR ddPTM_A549_MK2206_60min_R1 1 AQAVSEDAGGNEGR 14 0 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 0 100.93 8.4555e-05 1654500.0 512.81 514.8 614.0 461.9 779.49 381.55 333.88 317.45 594.03 899.83 800.42 False True 599.3597909992272 541.001121111417 701.0744326488056 575.0655207354786 664.828053584159 421.9253677476078 394.5416741872779 362.4495096498519 459.4831534709848 696.5577780409238 601.653623531818 0.9961874533072277 0.899190331366477 1.1652459242801017 0.9558082894269592 1.1050013289731315 0.7012762015307544 0.655762150772475 0.6024222168266955 0.7637004673448715 1.1577388563738733 1.0 9.232789345480086 -7.252809441567321 24.789501048082652 0.8308994677702266 1.021363584217628 0.2935604786154248 0.16157375800567744 646.2630903888925 1856389.856442387 0.023695050304219534 0.04061746045472305 5.587152923847316e-08 7.252809441567321 0.19046411644740147 AQAVSEDAGGNEGR ddPTM_A549_PD325901_60min_R1 2 AQAVSEDAGGNEGR 14 0 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 0 ; 88.021 0.00021605 3369000.0 1408.5700000000002 1704.9099999999999 1529.27 1690.4 1571.9 1852.96 1576.71 1796.44 1773.56 1851.08 2060.52 False True 1551.5669894655714 1848.5887490821651 1633.055458447564 1794.8121688230576 1461.4951667606097 1837.8701081069305 1636.7125618588175 1760.6085949200829 1699.023440921037 1734.2024928927117 1807.089102712468 0.8586001581973163 1.0229649142963706 0.9036939329645246 0.9932062376608976 0.8087565602420397 1.0170334740817482 0.9057176867494178 0.9742787958144303 0.9401990407505514 0.9596662888894895 1.0 10.819451928037912 -11.4315368344197 0.32122071906796235 1.0452823486725065 0.9316105999355943 0.06003249244543085 0.06335839896990128 7.842471680753741 0.7095589811059978 0.3344913192642083 0.0222970412689669 3.702228038488171e-12 11.4315368344197 -0.11367174873691221 AQAVSEEEEEEEGKSS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.008)S(0.496)S(0.496)PK 177.7 3.8542e-35 517770000.0 3904.1 4453.0 4341.1 3420.8 4611.6 2989.4 4519.8 3522.3 6185.5 5725.1 4982.0 True False 4563.016633919153 4679.638679699186 4956.7332566314835 4258.896153565546 3933.239748949581 3305.736323796878 5340.989154761166 4021.596811591349 4784.494126213787 4431.795933745366 3744.831903794906 1.2184836999746562 1.2496258309904307 1.323619693479024 1.1372729839354612 1.0503114291895848 0.8827462510258308 1.426229345394318 1.0739058293954336 1.2776258719023723 1.1834432219118594 1.0 11.870685245801582 -10.996566999380178 1.2587171089108198 0.9994623303844691 1.1886471789143116 0.0 0.14960967791180996 0.6185282949489381 1.7358445520475123 0.10053286058862039 0.022673546076011828 1.0079361012788885e-11 10.996566999380178 0.18918484852984252 AQAVSEEEEEEEGKSS(ph)SPKK ddPTM_A549_PD325901_60min_R1 1 AQAVSEEEEEEEGKSSSPKK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.004)S(0.667)S(0.329)PKK 202.44 1.0219999999999998e-55 178960000.0 14722.0 15097.0 16709.0 16614.0 20227.0 20076.0 17595.0 19837.0 18078.0 18904.0 19722.0 True False 16216.566602236406 16369.277172926099 17842.973219379408 17640.209046868345 18806.32529936183 19912.507712176593 18264.587353353436 19441.335473174546 17318.244527938452 17710.398213823188 17296.319028058602 0.9375732822648224 0.9464023614719046 1.0316052329073029 1.019882266177669 1.0873021750381484 1.1512569628181542 1.0559811786383033 1.1240157770931627 1.0012676396546734 1.0239403068995694 1.0 14.078177418277741 -5.749252201716214 5.959821358903869 1.0312736576973949 0.940550377711625 0.35470073520696277 0.0511959658159229 0.16475806898948545 20.366070633651628 0.008376427527147304 0.030932218385360876 1.781344012214792e-06 5.749252201716214 -0.0907232799857699 AQAVSEEEEEEEGKSSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.019)S(0.383)S(0.598)PK 143.29 3.7381999999999996e-21 513020000.0 5074.1 6249.2 5384.7 5051.7 6093.8 4578.1 4834.8 4598.9 7031.0 6890.3 7227.5 True False 5930.484030165513 6567.257587508673 6148.331429127074 6289.366726779431 5197.410092408046 5062.551503303167 5713.220577335121 5250.808158540568 5438.489726199844 5333.776444478821 5432.712281147667 1.0916249054353917 1.208835890370644 1.1317241022431306 1.1576844863668712 0.9566878979481104 0.931864461306185 1.0516331956619274 0.9665168863739878 1.001063455002435 0.981788868699679 1.0 12.407456927925157 -6.7546169878127875 24.997666229126153 0.9940243074096823 1.1507263305453985 0.7993541877789878 0.03913551366942626 50.167990333707294 183816.77772178676 0.005158469329640716 0.010552649660490623 1.759474642544524e-07 6.7546169878127875 0.15670202313571624 AQAVSEEEEEEEGKSSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.001)S(0.133)S(0.866)PK;AQAVSEEEEEEEGKS(0.002)S(0.2)S(0.798)PK 277.59 8.536399999999997e-127 1543040000.0 104768.0 97085.0 102267.0 101404.0 120357.0 95024.0 108533.0 106656.0 104703.0 109315.0 114262.0 True False 115403.97023387488 105266.69366983717 109207.45360142877 107667.49477480662 111903.53952910923 94250.1560491069 112663.28270653635 104528.66240998662 100302.69702449035 102412.83224418541 100208.49836649584 1.1516385547641292 1.0504767099177739 1.0898023159874202 1.0744347688060423 1.1167070792722662 0.9405405488105679 1.1242887034839024 1.0431117531338558 1.0009400266397566 1.021997474402097 1.0 16.61264533857168 -6.454872788272238 0.25471591412706257 0.987918886114756 1.1624484562772672 0.30726548678556087 0.05008243259914397 3.8686736376736492 0.3209139185930503 0.03236384827640388 0.2054824645208959 3.508546297768182e-07 6.454872788272238 0.17452957016251125 AQAVSEEEEEEEGKSSS(ph)PKK ddPTM_A549_MK2206_60min_R1 2 AQAVSEEEEEEEGKSSSPKK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKSSS(1)PKK;AQAVSEEEEEEEGKS(0.003)S(0.158)S(0.839)PKK 267.5 7.311599999999999e-112 167178000.0 15181.2 19932.0 17596.2 17047.3 26912.8 18978.6 18201.2 17226.2 29030.0 28977.9 28767.0 True False 17743.415415295065 20946.453663544613 20091.605752076408 21223.88926528237 22953.962771170587 20986.902855024913 21508.122439851086 19668.06660302498 22454.751351384086 22431.772263974388 21623.359971189893 0.8205669904647422 0.9686956001034454 0.9291620626417757 0.9815259651395638 1.0615354321323576 0.970566224813675 0.9946706926447904 0.9095749517757616 1.0384487601049006 1.0373860627516533 1.0 14.400303094904304 -4.047673857059173 0.7175401841564262 1.007416583117981 9.548539700955124e-13 0.5699612396615024 0.04274485405428252 6.710555724648002 0.6475315183912342 0.0067623244200862445 8.20684462849732 8.96037411842866e-05 4.047673857059173 -1.0074165831170263 AQAVSEEEEEEEGKSSS(ph)PKKK ddPTM_A549_MK2206_60min_R1 2 AQAVSEEEEEEEGKSSSPKKK 21 3 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.023)S(0.023)S(0.954)PKKK;AQAVSEEEEEEEGKS(0.152)S(0.152)S(0.696)PKKK 196.41 3.6886e-56 96443000.0 18690.199999999997 23124.0 21151.9 20405.1 29019.0 19801.9 19390.7 17399.0 35909.0 35144.0 34036.0 True False 21844.648828481797 24300.91282941027 24151.557478736624 25404.350416019748 24750.34354123684 21897.323914562596 22913.739192713703 19865.361532202776 27775.6688348898 27204.945991431967 25583.92185418775 0.853842853061487 0.949850963738483 0.9440131038698953 0.9929810824473494 0.967417883868557 0.8559017667175329 0.8956304402158353 0.7764783540781133 1.0856689210197572 1.0633610494310854 1.0 14.642949816790683 -8.790438763791473 24.999984961421408 1.0404547784902676 0.9104714054103106 0.5238967947628433 0.061267857344150155 136.7639160809826 117901.74884678054 0.011452136049889367 0.012192690667727754 1.6201724246719209e-09 8.790438763791473 -0.129983373079957 AQAVSEEEEEEEGKSSS(ph)PKKK ddPTM_A549_PD325901_60min_R1 1 AQAVSEEEEEEEGKSSSPKKK 21 3 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.028)S(0.138)S(0.834)PKKK 192.89 5.5732e-46 99016000.0 4439.5 5600.9 4901.7 7788.2 5452.9 7922.7 6302.6 7414.7 8830.6 6542.6 6211.1 True False 4890.194771812835 6072.907499360258 5234.358838316599 8269.259425714463 5069.907115483765 7858.1801579628145 6542.4488919150535 7266.807991780372 8459.480591238698 6129.499119432901 5447.174075406891 0.897748943602018 1.1148730360534012 0.9609310746922669 1.5180824609679413 0.9307407924364993 1.442615941620303 1.2010721158064603 1.3340509943658372 1.553003534333864 1.125262206527711 1.0 12.411292256799763 -6.225689264678558 24.698699617052295 1.270396999791826 1.0035531281662295 0.2789667413560697 0.1941601995345421 633.7838325644324 437861.7281259732 0.0317115649248498 0.083897292817027 5.947175235527518e-07 6.225689264678558 -0.26684387162559653 AQAVSEEEEEEEGKSSSPK ddPTM_A549_PD325901_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 0 148.91 6.4335e-21 6234300.0 2462.8 2865.8 2491.4 2489.1 3088.7 2615.1 2864.7 2801.5 3013.5 2914.6 3149.4 False True 2712.8216429824656 3107.3110235259755 2660.481386005259 2642.846053843748 2871.7603674365373 2593.8034926336422 2973.717726123988 2745.621884765765 2886.8530747285354 2730.571658591253 2762.0437656914983 0.9821790938578016 1.125004267536665 0.9632292648842904 0.9568443797566298 1.0397229772778676 0.9390884839886903 1.076636714834783 0.994054445794916 1.0451873031801109 0.9886055002128592 1.0 11.431520464520846 -7.788723401775981 24.999366640196335 1.0231704161834745 1.0046819872351727 0.03093205126152465 0.05260808397749933 750.8530661635681 687976.7450732139 0.007806734453873877 0.010788503601670867 1.6265843827932736e-08 7.788723401775981 -0.018488428948301827 AQCETLS(ph)PDGLPEEQPQTTK ddPTM_A549_MK2206_60min_R1 1 AQCETLSPDGLPEEQPQTTK 20 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659;A0A087X146 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 AQCET(0.082)LS(0.917)PDGLPEEQPQTTK 55.588 0.00043057 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AQDIIGHHQS(ph)EDRETSDR ddPTM_A549_MK2206_60min_R1 1 AQDIIGHHQSEDRETSDR 18 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 AQDIIGHHQS(0.997)EDRET(0.001)S(0.002)DR 99.943 7.5275e-08 21496000.0 1578.0 1955.4 2035.3 1509.1 3293.6 2457.6 2074.0 2410.7 3589.9 2958.2 2788.0 True False 1844.3278216040637 2054.9215078113157 2323.936144576733 1878.8295677460728 2809.115803005537 2717.661600777151 2450.81895370916 2752.4241074591205 2776.7933818923075 2289.9405654408733 2095.6626551144514 0.8800690402641825 0.9805593007998176 1.108926638982272 0.8965324467469997 1.3404427454723726 1.2968029917146804 1.1694720749677683 1.3133908268784802 1.3250192606694406 1.092704763265351 1.0 11.033190785429168 -6.750179653681755 24.9999372827405 1.1921218986659494 0.9776962924005475 0.5187075179110412 0.11519983870589333 204.89305648787598 454920.5168148475 0.02107414763617734 0.04355631265708263 1.7775439450780183e-07 6.750179653681755 -0.21442560626540197 AQDIIGHHQS(ph)EDRETSDR ddPTM_A549_PD325901_60min_R1 1 AQDIIGHHQSEDRETSDR 18 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 AQDIIGHHQS(0.886)EDRET(0.095)S(0.02)DR 97.94 5.767199999999999e-07 24696000.0 4361.3 5108.2 5243.3 5828.8 6186.6 4932.3 4848.5 5026.1 5812.2 6126.7 6321.4 True False 4804.055965380632 5538.685941229459 5599.141868524272 6188.831737834736 5752.074558611353 4892.132984098853 5033.012320701005 4925.850492600828 5567.933446469952 5739.859116410839 5543.9078746562 0.8665468608059348 0.9990580771641944 1.0099630071633354 1.1163301912224741 1.037548727118425 0.8824340329432754 0.9078455909610731 0.888515935684862 1.0043336888629741 1.0353453279139837 1.0 12.436687568493467 AQDIIGHHQSEDRETS(ph)DR ddPTM_A549_PD325901_60min_R1 1 AQDIIGHHQSEDRETSDR 18 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 AQDIIGHHQS(0.106)EDRET(0.026)S(0.867)DR 91.583 2.169e-06 18277000.0 4226.2 3869.5 4778.8 4283.0 5017.6 4349.2 4280.7 4020.1 4776.6 4993.5 5088.5 True False 4655.240712835995 4195.5963450114305 5103.118105258862 4547.551182601249 4665.181085780288 4313.781557172662 4443.6043809889225 3939.9159517925614 4575.856113073945 4678.209557803958 4462.64675865917 1.0431568897545211 0.9401587380561628 1.1435182709357272 1.0190255757476958 1.045384351053134 0.9666419482569051 0.9957329408532508 0.8828652960594923 1.025368208719435 1.0483038005924439 1.0 12.123683899071793 -7.238122174706798 23.997289486617227 0.9973113847816802 1.0375796743150463 0.14610405478522637 0.05922664716121513 890.4732048294247 916443.4632896334 0.008317458261263132 0.014399986305196155 5.779334416522151e-08 7.238122174706798 0.04026828953336603 AQDTISRGS(ph)DDSVPVISFK ddPTM_A549_MK2206_60min_R1 2 AQDTISRGSDDSVPVISFK 19 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5;A0A087X1U5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 AQDT(0.011)IS(0.072)RGS(0.831)DDS(0.085)VPVISFK;AQDT(0.151)IS(0.118)RGS(0.73)DDSVPVISFK 105.73 4.2694999999999996e-10 6431200.0 2328.0 2741.0 2549.6000000000004 2239.2 2802.3 3020.7 2603.1 2327.4 3790.5 3486.6 4160.0 True False 2720.9094858645494 2880.505192242411 2911.171618047876 2787.8041005215064 2390.085382184362 3340.348469021622 3076.049574927826 2657.316077363568 2931.9578021846846 2698.974638451134 3126.9571898407885 0.8701460623460235 0.921184722835644 0.9309918368905142 0.8915389406605371 0.7643486101918956 1.068242469028397 0.9837197595546378 0.8498089088002089 0.9376392525328969 0.8631313045218104 1.0 11.6105437525892 -7.268300417270953 24.99944969192967 0.967007260309512 0.8821303342719329 0.1957388152539561 0.07072477120666067 551.5998887313322 2009852.3131906472 0.009814137650960099 0.01589408174567314 5.391375524651646e-08 7.268300417270953 -0.08487692603757913 AQDTISRGS(ph)DDSVPVISFK ddPTM_A549_PD325901_60min_R1 1 AQDTISRGSDDSVPVISFK 19 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5;A0A087X1U5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 AQDT(0.216)IS(0.131)RGS(0.625)DDS(0.028)VPVISFK 91.72200000000001 1.2497e-06 5737700.0 2099.4 1923.2 2019.7 2102.7 2772.4 2369.5 2375.9 2530.6 2679.4 2512.6 2618.9 True False 2312.5295425034064 2085.2748134709864 2156.76898744273 2232.579003421818 2577.6761882607775 2350.2035776052203 2466.3161746423666 2480.1251977827055 2566.7941358644907 2353.954007197002 2296.791902574924 1.0068520094967417 0.9079075954304756 0.9390354367867569 0.9720423521690768 1.1222941814497671 1.0232549039250864 1.0738091561004677 1.0798214653239797 1.1175562457299106 1.0248878030952624 1.0 11.165404434053887 -6.612065511235645 6.617640089228463 1.0612421783199615 0.9483247042328969 0.6043686770535444 0.04166994028471187 0.1287508572725688 7.9330228698650895 0.007126054693427287 0.014929230624608408 2.443062000734554e-07 6.612065511235645 -0.11291747408706454 AQDTISRGSDDS(ph)VPVISFK ddPTM_A549_PD325901_60min_R1 1 AQDTISRGSDDSVPVISFK 19 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5;A0A087X1U5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 AQDT(0.002)IS(0.009)RGS(0.249)DDS(0.74)VPVISFK 124.81 3.6214e-15 7135600.0 2423.5 2609.2 2914.9 2302.6 3052.2 2926.0 2462.5 2593.3 3122.3 3114.8 3164.1 True False 2669.531935913594 2829.086440988196 3112.7226427176415 2444.8263724159797 2837.8240015183765 2902.1716261122087 2556.211785031704 2541.5745970955068 2991.0805890907295 2918.130996424905 2774.935758882475 0.9620157610382558 1.0195142110704316 1.121727821177093 0.8810389085910092 1.0226629544250163 1.0458518244332164 0.9211787252549386 0.9159039408245805 1.07789183209607 1.0516030820115625 1.0 11.438238657416916 -8.790442831402634 24.99985971170929 1.036782240443518 0.9893884852918406 0.12401513735742098 0.06641509793524539 387.01275869255414 333588.2562743369 0.011846713481194268 0.012612775854169679 1.6201572501743137e-09 8.790442831402634 -0.04739375515167743 AQEAEAQS(ph)EDDDEDT(ph)EEEQGEEKEK ddPTM_A549_PD325901_60min_R1 1 AQEAEAQSEDDDEDTEEEQGEEKEK 25 1 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 2 AQEAEAQS(1)EDDDEDT(1)EEEQGEEKEK 193.47 2.6747999999999997e-58 14267000.0 2033.8 1797.4 2466.4 2403.0 2222.9 2438.0 1887.6 2570.8 2618.2 2263.8 2615.6 True False 2240.269878795572 1948.873205975848 2633.784735668046 2551.4278523910352 2066.771172588688 2418.145736316325 1959.4336509343525 2519.5233772464157 2508.1661590357585 2120.8632816574755 2293.8977816545016 0.9766214940840782 0.849590257055918 1.1481700521844511 1.1122674570750868 0.9009866041624593 1.054164555916789 0.8541939691493521 1.098359045200863 1.0934079884007357 0.924567475769464 1.0 11.163585389535532 AQEAEAQS(ph)EDDDEDTEEEQGEEKEK ddPTM_A549_MK2206_60min_R1 1 AQEAEAQSEDDDEDTEEEQGEEKEK 25 1 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 1 AQEAEAQS(1)EDDDEDTEEEQGEEKEK 115.43 2.4713e-17 6586900.0 1760.4 2822.9 1905.4 1801.9 2955.7 2099.9 1761.6 2032.4 2845.3 2824.7 2746.0 True False 2057.5124823522146 2966.573552419228 2175.6143712850726 2243.365580890364 2520.920445392113 2322.1100241991926 2081.6599174802573 2320.4989239639576 2200.844093010442 2186.598308160649 2064.0924142554813 0.9968121912285405 1.4372290368061218 1.0540295367878756 1.0868532655789769 1.2213215009083833 1.1250029350244855 1.00851100614655 1.1242223981531185 1.0662526918903905 1.0593509733668371 1.0 11.011291849707845 -7.926509204270707 0.2710054087081548 0.9909016157569578 1.2156662402091107 0.13799501448832496 0.113079434263154 2.1480820691723292 0.4234723416202856 0.09295146124997619 0.17063834143321488 1.1843792654512018e-08 7.926509204270707 0.22476462445215295 AQEEAERLEADR ddPTM_A549_MK2206_60min_R1 2 AQEEAERLEADR 12 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 105.14 0.00016924 7562800.0 962.64 1272.46 1075.33 1071.38 1223.43 646.04 615.06 625.75 1358.2 1759.13 1693.3 False True 1125.1100977116198 1337.2227788839036 1227.8279636160273 1333.8681480960756 1043.4650676679216 714.4035239933554 726.808440534405 714.4519787790038 1050.5698685997197 1361.7413112311551 1272.8068772974536 0.8839597882284876 1.0506093286698954 0.9646616352537866 1.0479737121850514 0.8198141338484181 0.5612819483740109 0.57102805892881 0.5613200176102106 0.825396128303762 1.069872684945367 1.0 10.313797820710912 -6.7726221420907375 24.570736924195696 0.8286748475687689 0.9897774499683261 0.23068378011637358 0.16946249984043968 277.5102179532229 609745.6772099554 0.028309937221301297 0.053863644967405463 1.6880210493646765e-07 6.7726221420907375 0.1611026023995572 AQEEAERLEADR ddPTM_A549_PD325901_60min_R1 2 AQEEAERLEADR 12 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 124.3 6.4874e-06 12256600.0 773.71 1054.98 928.0600000000001 1022.8399999999999 1385.06 1232.53 1158.79 1135.07 1153.1599999999999 1378.06 1308.92 False True 852.2564696248025 1143.886867052632 991.0437324781411 1086.0185037618169 1287.7781637976018 1222.4926843240185 1202.8883875642189 1112.4301384048106 1104.6966954219213 1291.0490564188083 1147.931137927515 0.7424282184412855 0.996476904631941 0.8633302989475311 0.9460658987981843 1.1218252743997936 1.0649529783912974 1.0478750404278816 0.9690739293065974 0.9623370766092733 1.124674654918482 1.0 10.164820384907193 -6.52103375296073 24.9877677850531 1.001537817943624 0.8843815989843219 0.4269319369864796 0.08065223756280414 58.43682712732284 791441.0159441801 0.010152906571524851 0.021387573922705152 3.01277186527685e-07 6.52103375296073 -0.11715621895930217 AQENYEGSEEVS(ph)PPQTK ddPTM_A549_MK2206_60min_R1 2 AQENYEGSEEVSPPQTK 17 0 Q93008;Q93008-3 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X 1 AQENYEGSEEVS(1)PPQTK;AQENYEGSEEVS(1)PPQTK 182.7 3.5826e-39 11539000.0 3396.7 4018.3 3146.54 3599.2 5884.6 4100.46 3692.55 4509.7 5299.3 5111.3 5011.3 True False 3969.979918658126 4222.814306453007 3592.7666861673824 4481.004161574228 5018.983135282482 4534.367955534941 4363.43853785861 5148.963785377027 4099.017011243187 3956.65378004798 3766.8559051560455 1.0539240200890205 1.121044821670202 0.9537839451861243 1.1895873573078974 1.3324064582381645 1.2037540244978127 1.1583768128443583 1.3669128618191002 1.0881799342609526 1.0503862849205727 1.0 11.879145131089711 -9.103007580668727 3.5954483147989182 1.0345035275090246 1.1721854042667381 0.2081756752202596 0.10999875144793499 0.23825042371927768 6.402608254954139 0.021679347019530525 0.021262423367683397 7.888463480790331e-10 9.103007580668727 0.13768187675771348 AQEQS(ph)PR ddPTM_A549_MK2206_60min_R1 2 AQEQSPR 7 0 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 AQEQS(1)PR;AQEQS(1)PR 74.464 0.018573 66769000.0 3279.3999999999996 2829.7 2065.67 1562.1 949.09 677.05 404.81 495.59000000000003 704.71 3989.1 4207.1 True False 3832.8825463677845 2973.7196433740814 2358.6130672470017 1944.814570125334 809.4801182519209 748.6949816105832 478.3587370544864 565.8414001807215 545.0943101906261 3087.9595394497273 3162.3609599469196 1.2120319580570966 0.940347949218294 0.7458392944765518 0.6149881669921633 0.25597334665600857 0.23675190501439472 0.15126633016065177 0.1789300485768137 0.17236941547614335 0.9764728247535535 1.0 11.626786334649355 -3.6673663835268724 14.177779502201334 0.5622813754336047 0.8794703881157914 0.0 0.38523320076654144 0.0 0.0 0.05710252002588442 0.0 0.00021509663509530083 3.6673663835268724 0.3171890126821867 AQEQS(ph)PR ddPTM_A549_PD325901_60min_R1 4 AQEQSPR 7 0 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 AQEQS(1)PR;AQEQS(1)PR;AQEQS(1)PR;AQEQS(1)PR 70.55199999999999 0.02118 158353300.0 4208.92 4181.46 3969.0 3881.91 3996.29 3434.43 1966.65 3172.07 3470.0699999999997 4646.27 5652.049999999999 True False 4636.206459956858 4533.846309035144 4238.360207535874 4121.686764242732 3715.6043768520617 3406.4611407616376 2041.4919419421724 3108.8005754092233 3324.23502539348 4352.903719262604 4956.883681296955 0.9353066882424419 0.9146565867869783 0.8550453228361653 0.8315076627265751 0.7495847422991948 0.6872182927379782 0.4118498785123846 0.6271683532012626 0.6706300246536556 0.8781532912879809 1.0 12.275217689448745 -6.115850244912644 1.6875306031946056 0.7745308248613184 0.9284664535507596 0.1848224604111749 0.14632663564688533 0.8130674427236326 4.302535110819112 0.027899496586026695 0.11751394982075931 7.658606483881039e-07 6.115850244912644 0.15393562868944122 AQESGQGSTAGPLRPPPPGAGGPAT(ph)PSK ddPTM_A549_MK2206_60min_R1 2 AQESGQGSTAGPLRPPPPGAGGPATPSK 28 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQESGQGSTAGPLRPPPPGAGGPAT(0.97)PS(0.03)K;AQESGQGSTAGPLRPPPPGAGGPAT(0.97)PS(0.03)K 116.22 1.0364e-20 39428000.0 3402.2 3618.6 2636.0 2566.1000000000004 3885.9 3386.3999999999996 3587.0 3015.4 4445.6 4346.299999999999 4604.5 True False 3976.408184196039 3802.7712837097374 3009.824437234938 3194.794615196607 3314.2892576206023 3744.7466002896053 4238.71146911994 3442.8421842752005 3438.678698164418 3364.467811363553 3461.0755722648823 1.148893776276006 1.0987252963162701 0.8696211262631716 0.9230641020374991 0.9575893933606815 1.0819603681288856 1.2246804152693445 0.9947318723301525 0.993528926591508 0.9720873587171891 1.0 11.757004727622096 -7.126884855253122 0.0049315965143303594 1.0503929709409738e-06 2.047354162792508 0.02435003232809163 0.09800947707464941 45182.712300262305 69.27938725910647 14137.816279413762 14623.342952583276 7.46646691038442e-08 7.126884855253122 2.047353112399537 AQESGQGSTAGPLRPPPPGAGGPAT(ph)PSK ddPTM_A549_PD325901_60min_R1 2 AQESGQGSTAGPLRPPPPGAGGPATPSK 28 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQESGQGSTAGPLRPPPPGAGGPAT(0.991)PS(0.009)K;AQESGQGSTAGPLRPPPPGAGGPAT(0.956)PS(0.044)K 113.92 1.2548e-20 56057000.0 3231.0 3906.0 4341.0 4681.2 5162.1 4380.700000000001 4519.1 4867.5 4379.7 4834.9 5127.0 True False 3559.0087414635136 4235.1723281081895 4635.606364553596 4970.347092223433 4799.53190427823 4345.025031616455 4691.076823446406 4770.413894020118 4195.6364398170135 4529.623588870806 4496.411502730782 0.791522025798137 0.9419005190107855 1.0309568778876839 1.105403072918219 1.0674138479904156 0.9663317134069277 1.043293484281276 1.0609380149310017 0.9331077543211737 1.0073863537889836 1.0 12.134558358873571 -5.323040211647682 2.9950599314760544 0.9975517231664103 0.7716255604951793 0.6073731687242795 0.05155259212665826 0.20951417465977284 2.8775162679610546 0.008515664583581812 0.10373915397073415 4.752912163397133e-06 5.323040211647682 -0.225926162671231 AQFFLGT(ph)TNKR ddPTM_A549_PD325901_60min_R1 2 AQFFLGTTNKR 11 1 E5RJ86;Q9NVT9 E5RJ86 ARMC1 Armadillo repeat-containing protein 1 1 AQFFLGT(0.983)T(0.017)NKR;AQFFLGT(0.861)T(0.139)NKR 79.46600000000001 0.00059341 6298800.0 2853.3999999999996 3310.4 3276.7 3354.5 3945.3999999999996 3608.8999999999996 3415.2 3603.1 4633.1 3982.3999999999996 3966.7 True False 3143.0750674379415 3589.3790258498098 3499.0765663977795 3561.6998463777486 3668.2887148910922 3579.5103149269803 3545.1673048691496 3531.2333439227286 4438.386919039251 3730.9505843593647 3478.821046983067 0.9034885741431586 1.0317803006747421 1.0058225241083552 1.0238238179760804 1.0544631831730285 1.028943503153528 1.0190714776615544 1.0150661089581239 1.2758307653934504 1.0724755697321515 1.0 11.764382752274587 -8.597838237564398 24.99998197175149 1.1310535335964342 1.0136063238963966 0.2965957762593565 0.07142856459600672 42.60578744646839 14208.280860933904 0.01708903004591178 0.019377138886502925 2.5244208729071554e-09 8.597838237564398 -0.11744720970003764 AQFSVAGVHTVPGS(ph)PQAR ddPTM_A549_PD325901_60min_R1 1 AQFSVAGVHTVPGSPQAR 18 0 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 AQFSVAGVHT(0.309)VPGS(0.691)PQAR 50.783 0.005254399999999999 3032700.0 1634.8 1581.9 1560.1 1672.8 1797.9 1603.9 1731.0 2188.0 1619.2 1873.3 1617.7 True False 1800.7636925238487 1715.2122646785333 1665.9777676434157 1776.1250567955572 1671.6217064182838 1590.83837017135 1796.8741522395449 2144.3586235472067 1551.1506549196781 1755.0195183006222 1418.733155445207 1.269275822315408 1.208974540487347 1.17427139927566 1.2519091768446042 1.1782495531329982 1.1213090806157522 1.2665342635738113 1.511460146904295 1.0933350284838572 1.2370328497397287 1.0 10.470387548114147 -8.97928766634954 21.988048231699644 1.041176339671412 1.2422498596281217 0.17591813042864557 0.11216623583973832 23.762964523262603 25227.549186452587 0.01759117505545436 0.018012753444778425 1.048847466864597e-09 8.97928766634954 0.20107351995670975 AQGAGVTLPPT(ph)PSGSR ddPTM_A549_MK2206_60min_R1 2 AQGAGVTLPPTPSGSR 16 0 H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 H3BND4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 AQGAGVTLPPT(0.993)PS(0.002)GS(0.006)R;AQGAGVTLPPT(0.992)PS(0.005)GS(0.002)R 164.01 6.6147e-50 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AQGAGVTLPPT(ph)PSGSR ddPTM_A549_PD325901_60min_R1 2 AQGAGVTLPPTPSGSR 16 0 H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 H3BND4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 AQGAGVTLPPT(0.736)PS(0.206)GS(0.058)R;AQGAGVTLPPT(0.761)PS(0.191)GS(0.048)R 139.49 5.142e-11 28495000.0 21313.0 23074.0 22330.0 23213.0 25057.0 23037.0 23630.0 24158.0 24677.0 27590.0 27357.0 True False 23476.680070198672 25018.52695821004 23845.4480811983 24646.814289451984 23297.08276195726 22849.394309893007 24529.252580832155 23676.149738415614 23639.911506579097 25847.96269146114 23992.26243031129 0.9785104734657603 1.0427748125413212 0.9938807626192223 1.02728178974542 0.9710248389299145 0.9523651375630833 1.0223818054708522 0.9868243900376688 0.9853139767558128 1.0773457803964914 1.0 14.55028158733048 -6.755384674303792 24.9981540632191 0.9902886813816224 1.011714217446906 0.0 0.03461067738062499 199.84070529782713 825074.7830071815 0.0030321012662018025 0.006182199671713638 1.756367230730318e-07 6.755384674303792 0.021425536065283635 AQGEPVAGHES(ph)PK ddPTM_A549_MK2206_60min_R1 2 AQGEPVAGHESPK 13 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK 137.27 4.280399999999999e-09 149291000.0 8045.200000000001 8539.8 7496.6 7095.799999999999 16979.7 12303.3 10813.7 11518.7 19069.0 10540.0 12217.6 True False 9403.033073744626 8974.439343565033 8559.730605529381 8834.271318542564 14482.008622872578 13605.227039730427 12778.409315199966 13151.510999539289 14749.901946935692 8159.006679652089 9183.632731393951 1.0238903654760345 0.9772210633909828 0.9320636893795 0.9619582551840181 1.5769368229814222 1.481464627088298 1.3914329643777443 1.4320597724450885 1.6061075587783067 0.8884291127802606 1.0 13.164849232077321 -6.737146390946983 24.921458699248745 1.3434726100212537 0.9710486879796851 0.41376128517265 0.20935903003853182 194.53146872495526 199562.97468930477 0.03396593696890935 0.07067842057150305 1.8316968942840788e-07 6.737146390946983 -0.3724239220415686 AQGEPVAGHES(ph)PK ddPTM_A549_PD325901_60min_R1 2 AQGEPVAGHESPK 13 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK 125.73 6.8757e-07 168294000.0 11892.2 11253.9 12515.8 11428.900000000001 13389.0 11439.2 11133.3 11410.7 13328.099999999999 12970.4 14794.5 True False 13099.487389425069 12202.30564856549 13365.19745161941 12134.837196084858 12448.602829542466 11346.042947854674 11556.983823875516 11183.104636979022 12767.966306716247 12151.446730457681 12974.87029006252 1.0096044967368956 0.9404568504943948 1.0300833189720473 0.9352569177804386 0.9594394819558911 0.8744629190277634 0.8907205671818573 0.8619049275231819 0.9840534834860939 0.9365370488338909 1.0 13.663432495564672 -8.971064579604237 24.99099750898052 0.9929648242161253 0.936942707290824 0.05578338726143839 0.05168142910068986 216.5163198301235 187002.70569695614 0.00888886157461279 0.009333245256640362 1.0688959225444654e-09 8.971064579604237 -0.056022116925301346 AQGEPVAGHES(ph)PKIPYEK ddPTM_A549_MK2206_60min_R1 9 AQGEPVAGHESPKIPYEK 18 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(0.976)PKIPY(0.024)EK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(0.992)PKIPY(0.008)EK;AQGEPVAGHES(1)PKIPYEK 202.44 2.1608999999999998e-49 887386500.0 47711.899999999994 52685.899999999994 52060.299999999996 46119.6 64908.10000000001 48191.4 50868.59999999999 48231.00000000001 74411.2 74001.5 74679.90000000001 True False 55764.50227603987 55367.38727032636 59443.233364864194 57418.9040703875 55360.20447324016 53290.98196113765 60110.76616617631 55067.89195124274 57557.18201026912 57284.5097537261 56134.81976961331 0.9934030696973237 0.9863287616770372 1.0589369237993311 1.0228750053183442 0.9862008054973314 0.9493391477847931 1.0708285234170334 0.980993475658256 1.0253383238156535 1.0204808706758357 1.0 15.77660831483713 -7.746466942669123 24.998135988781467 1.0134670393752176 1.0020724194211217 0.06896461886087712 0.03266691980886743 900.1084929054543 1502822.7115556009 0.004943615335817426 0.007316587756442436 1.792805010679881e-08 7.746466942669123 -0.011394619954095964 AQGEPVAGHES(ph)PKIPYEK ddPTM_A549_PD325901_60min_R1 6 AQGEPVAGHESPKIPYEK 18 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK 239.51 5.460099999999999e-75 5277671000.0 122262.1 117314.4 127836.0 126086.1 142702.2 135787.1 136454.9 135208.69999999998 140742.6 138297.6 154107.9 True False 134674.0583873993 127200.89620292267 136511.7197003161 133874.15203469063 132679.2897678643 134681.2948776695 141647.7658904863 132511.85640932707 134827.67796757558 129565.46593398383 135153.60527046712 0.996451838024534 0.941157995366608 1.0100486733382448 0.9905333399488969 0.9816925675223295 0.9965053807343695 1.0480502211318978 0.9804537299922305 0.997588467564448 0.9586534201192753 1.0 17.04424047122581 -5.7833446929271135 24.999820910911108 0.9995946575225727 0.9688048820407582 0.14418392769668342 0.024205222319314122 193.1433717120825 220428.49274311506 0.002608003417422103 0.008118156322296968 1.6468547890753557e-06 5.7833446929271135 -0.030789775481814496 AQGGQT(ph)QSPTK ddPTM_A549_MK2206_60min_R1 2 AQGGQTQSPTK 11 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 AQGGQT(0.5)QS(0.5)PTK;AQGGQT(0.5)QS(0.5)PTK 182.25 1.6312e-18 98723000.0 18450.5 14175.5 10001.599999999999 8377.4 11176.900000000001 9960.4 8435.7 11388.1 11330.2 22655.5 23186.3 True False 21564.49332858416 14896.972401544082 11419.977272932083 10429.86337607578 9532.792815949904 11014.40291682158 9968.357496530554 13002.398049593567 8763.927790611498 17537.60681507189 17428.50180067439 1.2373119373777575 0.8547477328755619 0.6552472153682304 0.5984371746556093 0.5469657073783035 0.6319764626237341 0.5719572233193809 0.7460422128246528 0.5028503247635653 1.006260148786471 1.0 14.089160936526739 -5.316364205303273 2.6889752216104674 0.7070009018086815 1.307399639939 0.489002112315556 0.16065097488662025 0.31280347554995613 3.2059764119655423 0.026875328931433438 0.3921884671593019 4.826538721230787e-06 5.316364205303273 0.6003987381303185 AQGGQTQS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 AQGGQTQSPTK 11 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 AQGGQT(0.002)QS(0.998)PTK;AQGGQT(0.053)QS(0.839)PT(0.108)K 198.97 5.8490000000000005e-24 77233000.0 14686.3 10839.199999999999 8058.2 5440.0 8402.5 7260.3 7201.5 7878.2 8224.8 17319.5 17957.6 True False 17164.988394438376 11390.868982033553 9200.97393024529 6772.800244210884 7166.503380724443 8028.580127002906 8509.919332274114 8994.958975975625 6361.895932306711 13407.012921084855 13498.232315453106 1.2716471307718922 0.8438785698622928 0.6816428785057871 0.5017546065240867 0.5309216209384732 0.5947875202749023 0.6304469454516464 0.6663805130748844 0.471313264109661 0.993242122950883 1.0 13.720482868550944 -5.295010587065953 2.433536355969949 0.6874612398900629 1.379893397588624 0.5155209191005763 0.1678346753213983 0.38321102084060804 2.9051693640417366 0.02888878438372651 0.5345303633312873 5.069783491983952e-06 5.295010587065953 0.6924321576985611 AQGGQTQS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 AQGGQTQSPTK 11 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 AQGGQT(0.003)QS(0.989)PT(0.008)K;AQGGQTQS(0.999)PT(0.001)K 206.64 7.5043e-25 301620000.0 34810.0 35427.0 27675.0 24266.0 29356.0 21199.0 18326.8 21591.0 24705.0 30431.0 42001.0 True False 38343.885574232416 38412.557621067324 29553.19192329435 25764.85570791547 27294.135832702123 21026.362372506053 19024.236402809755 21160.350567188165 23666.73476395171 28509.581466613065 36835.1432662757 1.0409593169503983 1.0428236248027796 0.8023096777351667 0.6994639744350989 0.7409808517750814 0.5708234177483619 0.5164697274362805 0.5744609275501708 0.6425042137848752 0.7739777543559855 1.0 15.168795233390128 -5.802684931172082 4.214077861250077 0.7548655441033149 1.0471317927618402 0.45321469145408144 0.13482290838034525 0.2053638167945036 7.723023512462308 0.02610689109675386 0.09468790708633147 1.5751251605029434e-06 5.802684931172082 0.29226624865852535 AQGGQTQSPT(ph)KSHTPSPTSPK ddPTM_A549_MK2206_60min_R1 1 AQGGQTQSPTKSHTPSPTSPK 21 1 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 AQGGQT(0.069)QS(0.399)PT(0.461)KS(0.061)HT(0.009)PS(0.001)PTSPK 55.985 0.0035414 2472700.0 596.95 940.65 726.02 786.94 390.03 232.45 399.46 282.04 525.82 1034.6 1475.3 True False 697.70056597373 988.5250671590024 828.9805530809218 979.740335327079 332.6571036696166 257.04770471217796 472.0367113060083 322.02003371127506 406.72260956199733 800.8831414390937 1108.942293791374 0.6291585864115207 0.8914125403039 0.7475416509246049 0.883490818965372 0.2999769289457722 0.2317953838998736 0.42566390870723964 0.29038484284905175 0.36676625270684676 0.7222045240072379 1.0 10.11496857836091 -6.707946125391069 24.999892315257316 0.5825578203922002 0.7924118613799043 0.2187580793965811 0.2335408390796576 197.70568701850226 92395.75936188552 0.045681531349358345 0.09509363703247048 1.9590876849672864e-07 6.707946125391069 0.2098540409877041 AQGPAASAEEPKPVEAPAANS(ph)DQTVTVKE ddPTM_A549_MK2206_60min_R1 2 AQGPAASAEEPKPVEAPAANSDQTVTVKE 29 2 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 AQGPAASAEEPKPVEAPAANS(0.99)DQT(0.009)VT(0.001)VKE;AQGPAASAEEPKPVEAPAANS(0.951)DQT(0.047)VT(0.003)VKE 118.74 5.1759e-21 11019700.0 2985.4 3218.9 2853.3 2828.8 4099.4 2529.7 2353.6 3483.2 4070.2 3785.7 3954.2 True False 3489.262533977677 3382.7282609664735 3257.940844750553 3521.8561269896595 3496.3836904423424 2797.3911749210442 2781.2186545081377 3976.954266852616 3148.3061987738033 2930.507740717162 2972.2630096318385 1.1739413782261068 1.138098563284774 1.0961145881750554 1.1849072964192011 1.1763372484575059 0.9411654237380376 0.9357242765850103 1.3380223264108866 1.0592286714101289 0.9859516910921525 1.0 11.53734606739694 -14.999976240390477 0.03190587342967957 0.3003359402623101 1.5626575093445927 0.17223665496742013 0.10732083245328114 1195.0974547307892 2.945992878103096 92.32375869912075 36.3317234143672 1.0000547100192404e-15 14.999976240390477 1.2623215690822827 AQGPAASAEEPKPVEAPAANS(ph)DQTVTVKE ddPTM_A549_PD325901_60min_R1 2 AQGPAASAEEPKPVEAPAANSDQTVTVKE 29 2 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 AQGPAASAEEPKPVEAPAANS(1)DQTVTVKE;AQGPAASAEEPKPVEAPAANS(0.996)DQT(0.003)VT(0.001)VKE 178.8 3.1397e-58 24224000.0 3210.9 3780.0 3947.7 4301.9 4750.0 3789.7 4045.3999999999996 3885.3 4393.5 4415.1 3736.9 True False 3536.8682042603527 4098.553865911155 4215.614661448564 4567.618592676235 4416.3763866104055 3758.83793967103 4199.349910727822 3807.804643541115 4208.856473807806 4136.329832514322 3277.284990160844 1.0792067869833832 1.2505942810027042 1.2863131140882773 1.3937202917626226 1.3475716637000974 1.1469365499051556 1.2813502406214983 1.1618777906019806 1.284250984105365 1.262120885102311 1.0 11.678285418639623 -10.887957860318435 0.6448623886331948 0.9552284371892372 1.2578142970770727 0.0 0.11614290596935405 0.716592519268146 0.39839091249986225 0.12784055178498105 0.017626050801848852 1.2943214236272124e-11 10.887957860318435 0.3025858598878355 AQGPAASAEEPKPVEAPAANSDQTVTVKE ddPTM_A549_PD325901_60min_R1 2 AQGPAASAEEPKPVEAPAANSDQTVTVKE 29 2 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 ; 218.67 1.1329999999999998e-90 18967900.0 2361.3 2229.6 1853.94 3290.8999999999996 2543.7 2694.8999999999996 2961.3 2865.8 2465.1000000000004 2620.3999999999996 2871.2 False True 2601.0174377028143 2417.496216781879 1979.759517046876 3494.1714188238248 2365.0392872886086 2672.953627891246 3073.993891985539 2808.6393708233923 2361.5004196161663 2454.9474967997385 2518.0606020363966 1.0329447335776307 0.9600627621220913 0.7862239357725593 1.3876438938753226 0.9392304876919813 1.061512826867465 1.2207783599408013 1.1153978456880664 0.9378250935288779 0.9749358275231274 1.0 11.29809728940499 -8.769299592346835 24.975390309781414 0.9706396262691144 1.06222789454108 0.07194857815922284 0.14722291155366757 353.21435254854424 1122315.8886618365 0.02478501800319888 0.02661875638535375 1.7009847016083664e-09 8.769299592346835 0.09158826827196553 AQGQES(ph)DS(ph)SETSVR ddPTM_A549_PD325901_60min_R1 2 AQGQESDSSETSVR 14 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1;H7C5W4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 2 AQGQES(0.639)DS(0.64)S(0.589)ET(0.113)S(0.02)VR;AQGQES(0.941)DS(0.543)S(0.475)ET(0.021)S(0.02)VR 52.265 0.02557 2930700.0 499.47 604.9300000000001 543.98 602.6700000000001 493.65999999999997 488.55 494.31999999999994 540.49 540.75 461.6 509.4 True False 550.1758267096196 655.9095741020195 580.8977540174761 639.8955571371223 458.9870246345459 484.5714107782361 513.1316181022833 529.7095029437975 518.0241580087792 432.4544972228512 446.74702935265447 1.2315153555846483 1.46819011880716 1.300283417349655 1.432344291274514 1.0273980451523705 1.0846662181064526 1.1485954788458725 1.1857034700630407 1.1595469560467067 0.9680075497076871 1.0 8.803314325863107 -2.0000000000000004 0.1152537132867943 0.9332065332845716 2.3410026683350447 0.5303830257792335 0.10834225670993024 52.567170627602 0.4050013654740605 0.4417552492515626 11.895155975695847 0.00999999999999999 2.0000000000000004 1.407796135050473 AQGQES(ph)DSSETSVR ddPTM_A549_MK2206_60min_R1 1 AQGQESDSSETSVR 14 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1;H7C5W4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 AQGQES(1)DSSETSVR 97.836 4.0981999999999995e-05 2845200.0 489.76 448.81 276.26 248.22 545.5 219.2 238.4 366.63 507.85 642.43 550.99 True False 572.4195145176213 471.65251197749615 315.4378220904874 309.0339111430192 465.2576726194802 242.39559850681613 281.71419410041665 418.6009252572852 392.82278586980385 497.30461681298766 414.16397644960955 1.3821084089076163 1.138806218784895 0.7616254431265488 0.7461631834622361 1.1233658624969454 0.585264804014909 0.6801996554973009 1.0107130244540123 0.9484716397530478 1.2007432927317705 1.0 8.69405826468122 -3.131453077383112 16.752304277562757 0.9471156205412847 1.150231437910571 0.0 0.23455315643710561 0.0 0.0 0.02821644729969099 0.0 0.00073883408476755 3.131453077383112 0.2031158173692862 AQGQES(ph)DSSETSVR ddPTM_A549_PD325901_60min_R1 4 AQGQESDSSETSVR 14 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1;H7C5W4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 AQGQES(0.831)DS(0.088)S(0.069)ET(0.006)S(0.006)VR;AQGQES(0.985)DS(0.007)S(0.007)ET(0.001)S(0.001)VR;AQGQES(0.997)DS(0.003)SETSVR;AQGQES(0.715)DS(0.239)S(0.043)ET(0.001)S(0.001)VR 118.52 2.9242000000000003e-06 11987300.0 1628.35 1615.8200000000002 1701.21 1833.0500000000002 1905.3400000000001 2007.15 1609.325 1804.2799999999997 1275.4199999999998 2116.35 1934.8100000000002 True False 1793.6588932720867 1751.9908221207827 1816.6643408067773 1946.2733353414008 1771.515491466162 1990.8044358684622 1670.5687435314314 1768.2922199697218 1221.8185327925232 1982.7232998214504 1696.8406357711212 1.057057955508572 1.0325016888369123 1.0706157682163255 1.1469983063300024 1.0440081726715045 1.173241843635923 0.984517171686102 1.0421086003554658 0.7200549698276607 1.1684793834044476 1.0 10.728635360574534 -8.61327484279653 8.355961421580071 0.8679070790299703 1.0722203134862085 0.0 0.11900448931245639 0.17766639198767833 14.633749602709202 0.01814793835232635 0.020576769450434435 2.43626854047598e-09 8.61327484279653 0.20431323445623817 AQGQESDS(ph)SETSVR ddPTM_A549_MK2206_60min_R1 1 AQGQESDSSETSVR 14 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1;H7C5W4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 AQGQES(0.42)DS(0.493)S(0.081)ET(0.002)S(0.003)VR 89.46600000000001 7.2544e-05 2802300.0 301.49 318.53 425.15 540.7 394.49 185.88 464.56 324.36 580.71 435.11 570.07 True False 352.3741412771924 334.7418164483675 485.44266293263837 673.1715242729454 336.46104357774294 205.54969822284198 548.9645386379589 370.33902331083937 449.1801122033156 336.8183488029811 428.5058858683988 0.8223320913389093 0.7811837071268892 1.1328728004490602 1.5709738103333484 0.7851958506844773 0.47968932283457516 1.2811131812704082 0.8642565610512444 1.0482472400420333 0.7860296903982867 1.0 8.743171210809889 -5.745570376487837 24.756761803086498 1.0198663940840937 0.801757720356206 0.06311914684664133 0.2717856885339408 396.3871437288819 618379.8577780939 0.03454661533166088 0.13288698306035251 1.7965099360086363e-06 5.745570376487837 -0.21810867372788778 AQGS(ph)DEDKLQNS(ph)DDDEK ddPTM_A549_MK2206_60min_R1 1 AQGSDEDKLQNSDDDEK 17 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 2 AQGS(1)DEDKLQNS(1)DDDEK 71.656 0.00028113 3905400.0 2484.5 2801.9 2081.0 2143.6 2304.8 2525.7 2180.2 3209.1 3620.7 3004.9 3237.6 True False 2903.8228598069063 2944.504742117482 2376.1170917624845 2668.7820962298597 1965.7669731500982 2792.9678975760285 2576.3141190340925 3663.9997524565747 2800.6172310698025 2326.0910030063133 2433.6145667857054 1.1932139540248756 1.2099306037630089 0.9763736313021979 1.0966330217832159 0.8077560842950017 1.1476623848717973 1.0586368746291912 1.505579315008765 1.1508055833051782 0.9558173404914286 1.0 11.248884978342806 -10.720152061699409 1.2201182751473 1.0061599724789505 1.1247172752258747 0.1060892242438054 0.16209438718105637 0.9927457015326441 2.809464588691412 0.08668432111754164 0.027673330978783377 1.90479366625632e-11 10.720152061699409 0.11855730274692422 AQGS(ph)DEDKLQNS(ph)DDDEK ddPTM_A549_PD325901_60min_R1 1 AQGSDEDKLQNSDDDEK 17 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 2 AQGS(1)DEDKLQNS(1)DDDEK 118.22 3.4435e-10 21462000.0 8424.2 8513.7 8922.1 7196.3 10156.0 6821.7 7777.8 7785.3 8816.7 8000.6 8998.4 True False 9279.41858243174 9231.179377832748 9527.607358945786 7640.799107016893 9442.677596297955 6766.146336927431 8073.788435175467 7630.016084050302 8446.16475990015 7495.440750609061 7891.653845557369 1.1758522058916225 1.1697395195595748 1.2073017323623974 0.9682126530826367 1.1965397597379084 0.8573800206323613 1.023079394152676 0.9668462699166213 1.0702654887295828 0.9497934016490907 1.0 12.946111960661447 -6.254481748050376 24.962115000741957 1.024014259245074 1.1828419988145216 0.48133505113692987 0.08144061100336722 350.44730945579084 1257305.5942326635 0.010197226890181512 0.026355527772383373 5.565680244658438e-07 6.254481748050376 0.1588277395694475 AQGVRS(ph)PLLR ddPTM_A549_MK2206_60min_R1 2 AQGVRSPLLR 10 1 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 AQGVRS(1)PLLR;AQGVRS(1)PLLR 95.18299999999999 0.00015688 224300000.0 8730.1 10262.5 10518.8 9561.6 13070.2 12429.2 14187.900000000001 12237.4 15079.1 15878.099999999999 17178.1 True False 10203.527449547302 10784.8174153184 12010.5240100102 11904.19242923653 11147.59089398925 13744.449694164781 16765.657778847726 13972.088925465729 11663.707926374642 12291.226182180626 12912.303678558666 0.790217431649367 0.8352357320426849 0.9301612097269751 0.9219263057609045 0.8633309106956815 1.064445976203915 1.298424990320487 1.0820756135612635 0.9033018597403838 0.9519003338335853 1.0 13.656458793760947 -5.92913098911805 0.9648355945296245 0.992542676921398 0.7758940466208956 0.3365387649888838 0.11002438404946735 1.0563170620662174 1.3435556611497288 0.019415524875681482 0.18596462015324022 1.1772508451133297e-06 5.92913098911805 -0.2166486303005024 AQGVRS(ph)PLLR ddPTM_A549_PD325901_60min_R1 6 AQGVRSPLLR 10 1 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR 95.18299999999999 0.00015688 532108000.0 22109.3 22152.700000000004 23068.399999999998 23508.3 26753.5 26347.8 23520.8 26423.1 28119.9 26459.5 27207.7 True False 24353.81985999359 24019.585773907413 24633.96034555821 24960.35429977701 24874.42645456453 26133.232252385256 24415.89691507562 25896.070541979054 26938.118392586373 24788.842654393487 23861.3253838206 1.0206398625495854 1.0066325062644728 1.0323802198456882 1.0460590054524639 1.0424578708201546 1.0952129369186316 1.0232414387019362 1.0852737693916252 1.128944765610213 1.038871154709696 1.0 14.542386559697407 -6.336547077195766 1.25885872021722 1.0631715483267512 1.0126855139741184 0.21449834762670972 0.03369880598936747 0.7883572859810816 2.274268047095816 0.00729210891470549 0.030500752551228395 4.607368224576249e-07 6.336547077195766 -0.05048603435263277 AQHPDYS(ph)FGELSR ddPTM_A549_PD325901_60min_R1 1 AQHPDYSFGELSR 13 0 Q86U86-8;Q86U86;E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2 Q86U86-8 PBRM1 Protein polybromo-1 1 AQHPDY(0.024)S(0.896)FGELS(0.08)R 46.248999999999995 0.012015999999999999 2641000.0 441.04 286.5 365.21 641.37 542.38 605.56 290.6 507.9 390.5 393.53 529.64 True False 485.8140561235121 310.6443604718376 389.99534678613645 680.985968243045 504.2850999094212 600.6285201327781 301.65894202242185 497.7695360601582 374.0886430003298 368.6824486397502 464.49763766458545 1.045891338793674 0.6687748984767807 0.8396067388996126 1.4660698204342346 1.0856569743710223 1.2930712051683093 0.6494305192575603 1.071629854917795 0.8053617772550651 0.7937229788582401 1.0 8.859527449163592 -7.757448042881756 24.999734878678908 0.9029846213343298 1.0571509223261044 0.1597174821530557 0.22270755392041808 197.3670167178545 1236200.9906598867 0.034922743062649225 0.050740445945191726 1.748042378158086e-08 7.757448042881756 0.15416630099177464 AQIFANTVDNAR ddPTM_A549_MK2206_60min_R1 4 AQIFANTVDNAR 12 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 275.57 1.0269999999999997e-91 92804000.0 19765.5 23112.399999999998 22263.3 21455.4 25467.799999999996 21665.2 20710.3 19928.6 31354.1 29038.299999999996 29422.4 False True 23101.433179920856 24288.722438957877 25420.57071073316 26711.973963169523 21721.52035699065 23957.797083804166 24473.093431534624 22753.54007877788 24252.44641220916 22478.527862024763 22116.006063070112 1.0445571914766398 1.098241805943245 1.1494195940369674 1.2078118393977961 0.9821628866914546 1.0832786451351868 1.1065783470009278 1.0288268150175786 1.09660154473852 1.0163918294252956 1.0 14.43280325186462 -14.99999998928706 0.20396367867439102 0.5579927725778185 1.107231459083564 0.24448370382334028 0.056194103664065465 46.84757271101243 0.5566347433599165 8.276963439988855 0.046017093577336174 1.000000024667456e-15 14.99999998928706 0.5492386865057454 AQIFANTVDNAR ddPTM_A549_PD325901_60min_R1 2 AQIFANTVDNAR 12 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 330.68 3.289899999999999e-172 161727000.0 18412.4 20145.9 19774.1 20043.2 23444.0 19600.5 21028.0 21942.1 21275.0 22932.0 22785.0 False True 20281.613293507537 21843.66569504221 21116.08933732301 21281.222942590088 21797.374317409347 19440.880026525065 21828.23204696312 21504.447602255554 20380.88573580541 21484.06960640039 19982.58944601537 1.0149642191418689 1.0931348889519397 1.056724374704784 1.0649882488995275 1.0908183034184218 0.9728909298290005 1.0923625341917726 1.0761592065108285 1.019932165992104 1.075139418964764 1.0 14.286455926586877 -8.909843864466795 4.628098903929366 1.0084961640119163 1.0584834877477258 0.0 0.03990914173750496 0.1843695637244786 6.737317175130445 0.005794691929047899 0.006090147630992306 1.2307111508380844e-09 8.909843864466795 0.0499873237358095 AQIHDLVLVGGSTR ddPTM_A549_MK2206_60min_R1 2 AQIHDLVLVGGSTR 14 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 81.311 0.00049 4037600.0 1675.1100000000001 2025.7 1877.53 1942.29 2952.6 1718.3200000000002 1748.6100000000001 2283.7 3233.7 2639.4 2919.0 False True 1957.8276154925118 2128.7994775357365 2143.7919862070244 2418.1511371927113 2518.276451285568 1900.1514818714977 2066.3098026255434 2607.421468537933 2501.2721131577905 2043.1577068570898 2194.1317396983814 0.8923017611338354 0.9702240932116384 0.9770570961713188 1.102099337720316 1.1477325657901223 0.8660152202769301 0.941743727252034 1.1883614011692685 1.1399826491282745 0.9311919015117819 1.0 11.099434435063014 -8.229780824715535 24.967778870337828 1.077119325157617 0.9905634546446045 0.12341098944689133 0.09947969166926161 994.875863877971 784618.2022806659 0.016089651417500444 0.020770557426569837 5.89140901931032e-09 8.229780824715535 -0.0865558705130125 AQIHDLVLVGGSTR ddPTM_A549_PD325901_60min_R1 2 AQIHDLVLVGGSTR 14 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 101.75 3.1011e-05 8543200.0 905.1 1011.45 945.9399999999999 1047.04 1240.02 1297.8200000000002 1140.24 1092.51 1072.6399999999999 1277.51 1240.1 False True 996.9850857005969 1096.6884411840836 1010.1371767993151 1111.713282799629 1152.925273036766 1287.2509842108495 1183.6324571632692 1070.7190309924854 1027.5606710060783 1196.8478005787795 1087.5755616415909 0.9167042004840047 1.008379077154637 0.92879723710839 1.0221940635753204 1.0600875136404646 1.1835968273026178 1.0883220430005707 0.9845008188454859 0.9448177278414331 1.1004732386338771 1.0 10.086899923433643 -3.6453811332277186 11.868534611147679 0.997946206251003 0.6466048156313878 0.0 0.08095653040218144 0.0 0.0 0.010672004503725352 0.0 0.00022626577463934018 3.6453811332277186 -0.3513413906196152 AQISS(ph)PNLR ddPTM_A549_MK2206_60min_R1 2 AQISSPNLR 9 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 AQIS(0.022)S(0.978)PNLR;AQIS(0.028)S(0.972)PNLR 133.44 7.169000000000001e-10 47512000.0 9463.3 8825.3 8861.5 8713.6 12980.0 10671.0 10631.0 10844.0 16543.0 17268.0 16537.0 True False 11060.47368452835 9274.47007409593 10118.193949376857 10848.432391168362 11070.659194502026 11800.198137163472 12562.515090107085 12381.1702083572 12796.036913742577 13367.146806853152 12430.406502018543 0.8897917926282031 0.7461115670344226 0.813987374245065 0.8727335175568645 0.890611195434702 0.9493010655160206 1.0106278574290462 0.9960390439642222 1.0294141958804532 1.0753587828911706 1.0 13.601585856057056 -7.117125781920355 1.0783710492291785 1.013955601070632 0.8106686301416427 0.8382714522008841 0.03847651884337111 0.11643662952275691 0.2658063576973951 0.005265667971259686 0.012693775599251396 7.636145907603816e-08 7.117125781920355 -0.2032869709289894 AQISS(ph)PNLR ddPTM_A549_PD325901_60min_R1 2 AQISSPNLR 9 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 AQIS(0.182)S(0.818)PNLR;AQIS(0.167)S(0.833)PNLR 125.74 7.028399999999999e-05 156743000.0 21689.0 21363.9 21943.7 23172.0 25095.0 23770.0 22784.0 24411.0 26763.0 24582.0 28364.0 True False 23890.851313402098 23164.31082961358 23432.931440187684 24603.281812569734 23332.413773050135 23576.425000918378 23651.057587883202 23924.103454940952 25638.244180839487 23029.888324809646 24875.407814210233 0.960420488051428 0.9312133092499822 0.9420119507267525 0.9890604405896395 0.9379711057328414 0.9477804415110009 0.9507806973267946 0.9617572356451642 1.030666285848527 0.9258094780522022 1.0 14.602432557335018 -8.672160494089315 5.547899106648702 1.014416093717505 0.9514451374569012 0.0 0.030966885187403908 0.07625606172965971 3.753465177095731 0.00296002991642288 0.003347992854347346 2.1273527347369776e-09 8.672160494089315 -0.0629709562606039 AQKLPDLS(ph)PVENK ddPTM_A549_PD325901_60min_R1 2 AQKLPDLSPVENK 13 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK 102.78 3.6099999999999997e-05 15988100.0 7959.799999999999 9243.2 8442.2 9009.6 10929.8 11165.5 9109.5 10077.400000000001 9857.9 9872.8 12548.2 True False 8767.873036304947 10022.156903013227 9015.138459072647 9566.102529713804 10162.128553763036 11074.571869909727 9456.167007409673 9876.398351432637 9443.606744770686 9249.429723097413 11004.850949593594 0.7967280135337719 0.9107035569058154 0.8191967797079135 0.8692623438091251 0.9234226433696787 1.0063354715693544 0.859272610844301 0.8974586204456835 0.8581312721113625 0.8404865968165605 1.0 13.425851984957168 -14.999999999965146 0.29600847837339866 2.00808715359182 0.8752199976011175 0.0 0.07224718553356228 34.435728399157384 0.4553072793013461 20.70669606477812 0.02017378478121178 1.000000000080254e-15 14.999999999965146 -1.1328671559907024 AQLDYVDLYLIHSPMS(ph)LKPGEELSPTDENGK ddPTM_A549_MK2206_60min_R1 1 AQLDYVDLYLIHSPMSLKPGEELSPTDENGK 31 1 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5 S4R3Z2 AKR1C3 Aldo-keto reductase family 1 member C3 1 AQLDYVDLY(0.001)LIHS(0.087)PMS(0.412)LKPGEELS(0.412)PT(0.087)DENGK 60.348 0.00040775 29828000.0 1490.4 1523.5 1688.8 1414.6 2086.0 1837.4 1794.3 1798.0 2516.2 2320.2 2282.8 True False 1741.9430832184387 1601.039642605368 1928.2972342952814 1761.1770635038067 1779.1521633074908 2031.8324484325901 2120.301084204603 2052.872006144066 1946.2847175457337 1796.0652085511158 1715.917757925132 1.0151670003839672 0.9330515027371281 1.123770195505731 1.0263761508205391 1.036851652761506 1.1841082936803793 1.2356659137139803 1.1963696958450822 1.1342529142533957 1.0467082121248614 1.0 10.744764692349833 -5.764115823622574 24.995348153454838 1.091755833250352 0.9741092407259887 0.29740183200499914 0.07635024487652617 76.93494469388294 718533.5621869349 0.0125542957391489 0.041797327270412174 1.7214094246333088e-06 5.764115823622574 -0.11764659252436338 AQLDYVDLYLIHSPMSLKPGEELS(ph)PTDENGK ddPTM_A549_PD325901_60min_R1 2 AQLDYVDLYLIHSPMSLKPGEELSPTDENGK 31 1 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5 S4R3Z2 AKR1C3 Aldo-keto reductase family 1 member C3 1 AQLDYVDLYLIHSPMSLKPGEELS(1)PTDENGK;AQLDYVDLYLIHSPMS(0.001)LKPGEELS(0.968)PT(0.031)DENGK 229.26 2.1349e-105 108319000.0 15813.2 18415.4 20869.6 25248.0 26727.0 25942.0 24820.0 28213.0 23955.0 24363.0 25482.0 True False 17418.544422937426 19967.33038685191 22285.936555099677 26807.511617631637 24849.7877231445 25730.736953042684 25764.53868202513 27650.26958232965 22948.254655756456 22824.716022184406 22347.875543706985 0.7794273056904675 0.8934777870854297 0.9972284171492646 1.19955525818115 1.1119530209725925 1.1513728409091795 1.1528853662906788 1.237266134235108 1.026865153731292 1.0213371726339193 1.0 14.447850070544833 -5.670765159550277 2.35797741758181 1.066465386513765 0.7923269185318464 0.6033737438007529 0.08199152169565713 0.21676000884965665 2.22141454709923 0.013906718805382114 0.08523467407144168 2.134198648013491e-06 5.670765159550277 -0.27413846798191854 AQLEPVAS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 AQLEPVASPAK 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAK;AQLEPVAS(1)PAK 137.46 2.8721e-08 1646120000.0 38647.0 40359.0 39185.0 37218.0 49564.0 36593.0 36597.0 37169.0 52719.0 54151.0 55502.0 True False 45169.66877156673 42413.10071277325 44742.022220429084 46336.41167077948 42273.20125703379 40465.246971532506 43246.20118075899 42437.8195752885 40778.23067494374 41918.251490497154 41719.32162272677 1.0827038171915138 1.0166296829157582 1.0724532537953755 1.1106703049921487 1.013276333668985 0.9699401955157607 1.036598858721625 1.0172221868576676 0.9774423238159663 1.0047682910467561 1.0 15.348428078646704 -6.941077020841643 7.661195389189452 0.9940418295050277 1.0666597496600034 0.5869292390411143 0.027120136281731023 0.1222435048076971 13.664693787506382 0.0039341344337330926 0.00745391695924694 1.1453098061272634e-07 6.941077020841643 0.0726179201549757 AQLEPVAS(ph)PAK ddPTM_A549_PD325901_60min_R1 4 AQLEPVASPAK 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK 136.83 3.455e-08 3045370000.0 107560.0 107196.0 107157.0 105425.0 121892.0 109242.0 113410.0 119478.0 114297.0 115314.0 124810.0 True False 118479.41201851281 116229.78312439482 114429.31840738757 111936.86281245323 113330.72642457168 108352.36937106957 117725.87961033349 117094.91756132219 109493.49456852415 108033.05436038958 109459.16123577698 1.082407453893293 1.061855232692984 1.0454064978709712 1.0226358538536509 1.0353699511770904 0.9898885406007876 1.0755233119021428 1.0697589515517816 1.0003136634006653 0.9869713337898183 1.0 16.740033181046236 -2.000000008927493 0.12491995703556853 0.9808992415164677 1.2750095551369969 0.3993454759446473 0.026468643181202223 58.853649569250706 0.48266027249031884 0.08871735874301828 3.050115015000942 0.00999999979443688 2.000000008927493 0.2941103136205292 AQLEPVAS(ph)PAKK ddPTM_A549_MK2206_60min_R1 1 AQLEPVASPAKK 12 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAKK 46.408 0.015926 2301900.0 1410.6 1482.7 1554.3 1341.6 2495.5 1749.6 1863.1 1767.1 2571.3 2668.5 2553.0 True False 1648.6747941411231 1558.1630968762584 1774.7231118339405 1670.2920602267116 2128.4152557688612 1934.7415107095137 2201.6011536429764 2017.5918365167836 1988.9046555223517 2065.6839966462608 1919.019640784504 0.8591234602826354 0.8119578683620321 0.9248071640936544 0.8703882048564592 1.1091159311421928 1.0081926571207904 1.1472530592458927 1.0513659129053952 1.0364170398533694 1.0764267091095534 1.0 10.906153761967865 -6.743970143347455 24.950798169139308 1.034809631038611 0.8668281448761308 0.762420469442203 0.0509350358011368 99.91905339097273 142710.63430083447 0.007356921762758145 0.015286717209518966 1.8031416980520203e-07 6.743970143347455 -0.1679814861624802 AQLEPVAS(ph)PAKK ddPTM_A549_PD325901_60min_R1 1 AQLEPVASPAKK 12 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAKK 46.408 0.015926 3593700.0 2648.9 2204.3 2015.1 2615.5 2811.5 3073.0 2383.3 2734.8 2924.9 2790.7 2747.1 True False 2917.814377982884 2390.064096991523 2151.856803780683 2777.0534947685182 2614.029939148454 3047.974506849902 2473.9977856918003 2680.252268590904 2801.9766246137374 2614.494725736157 2409.2241153016826 1.2111012667733967 0.9920472245863435 0.8931741925185022 1.152675451457855 1.0850090377835713 1.2651270122573197 1.0268856973407834 1.1124960320494233 1.163020329581449 1.085201957398127 1.0 11.234352889527452 -5.231335150364135 22.73434544898822 1.0789371502015852 1.2111019643156813 0.14011206262122533 0.0950475792307077 5466.229060833514 4127799.4294097833 0.013730595927168354 1.8115016989387647 5.870361547016883e-06 5.231335150364135 0.13216481411409609 AQLEPVAS(ph)PAKKPK ddPTM_A549_MK2206_60min_R1 2 AQLEPVASPAKKPK 14 2 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAKKPK;AQLEPVAS(1)PAKKPK 111.06 2.0296e-06 84927000.0 4067.8 6192.1 7220.9 6428.9 9248.6 7216.6 6985.4 5109.6 10038.8 7770.1 9664.5 True False 4754.34519183841 6507.251441402498 8244.932199859548 8003.9807886042845 7888.143191546342 7980.255822008622 8254.556759517822 5833.901447493722 7765.027828669463 6014.829013431185 7264.537923369305 0.6544594084290135 0.8957557259725095 1.134956178470266 1.1017880108872808 1.0858423859514807 1.0985221505055296 1.1362810472726317 0.8030657295802166 1.068894940129658 0.8279713144702667 1.0 12.826655319703333 -5.4000436023187035 3.0436752506878437 1.0422464612031133 0.6424491535259209 0.4940500931186542 0.11024511243746668 0.14096020044575522 2.098002023929096 0.012065425265152046 0.11181257334206322 3.980672033766011e-06 5.4000436023187035 -0.39979730767719235 AQLEPVAS(ph)PAKKPK ddPTM_A549_PD325901_60min_R1 3 AQLEPVASPAKKPK 14 2 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAKKPK;AQLEPVAS(1)PAKKPK;AQLEPVAS(1)PAKKPK 94.882 1.0707000000000001e-05 113966400.0 5731.7 7068.299999999999 8524.6 8943.4 7723.1 14159.5 11669.9 11622.9 9151.9 9397.1 8997.4 True False 6313.577964545472 7663.97044720101 9103.130618584104 9495.813506064913 7180.656099248597 14044.189726567265 12114.004430514311 11391.072141511338 8767.27746958955 8803.765502280883 7890.776839217853 0.800121216603977 0.9712567727312227 1.1536418788756952 1.2034066733290298 0.9100062320302997 1.7798234587964026 1.5352106234086669 1.4435932448243511 1.111079130512906 1.1157032674559235 1.0 12.945951623800362 -5.507951348981598 2.068045994462205 1.166968284340742 0.7769349397034453 0.19706972187008376 0.25034075560271024 0.6866523284480316 4.524507204560184 0.03955951634088391 0.411746665728439 3.104907390028328e-06 5.507951348981598 -0.3900333446372968 AQLGEDIR ddPTM_A549_MK2206_60min_R1 1 AQLGEDIR 8 0 C9JTY3;C9JUE0;C9JJP5;Q92734-4;Q92734-3;Q92734-2;Q92734 C9JTY3 TFG Protein TFG 0 85.212 0.008365000000000001 884600.0 553.13 516.86 551.93 468.24 828.63 550.73 577.86 474.03 843.07 760.47 942.87 False True 646.4848212698704 543.1659663124456 630.201973309211 582.9588210200923 706.7396246795233 609.0078830550128 682.8496820590047 541.2252041559907 652.1159911061449 588.6792988306472 708.7293571118236 0.9121744637535423 0.7663940555897484 0.8891997586742798 0.8225408121877937 0.9971925356099136 0.8592954093743338 0.96348440375282 0.7636556870757591 0.9201199083435933 0.830612268171876 1.0 9.46909099961638 -13.182193226930645 0.15299989213317497 1.2674424269247166 0.8313179945900472 0.0 0.08777049761435848 28.153577936424888 0.4734320405384207 2.508509746090734 0.1409019116286932 6.573652963604837e-14 13.182193226930645 -0.43612443233466947 AQLGGPEAAKS(ph)DETAAK ddPTM_A549_MK2206_60min_R1 2 AQLGGPEAAKSDETAAK 17 1 P04792;C9J3N8 P04792 HSPB1 Heat shock protein beta-1 1 AQLGGPEAAKS(0.96)DET(0.04)AAK;AQLGGPEAAKS(0.992)DET(0.008)AAK 108.55 2.2291999999999997e-09 51959000.0 20098.9 23602.4 22596.8 19179.8 30577.0 22276.9 20120.2 22967.5 34209.0 34748.0 33571.0 True False 23491.10294907348 24803.661345998662 25801.36602553509 23878.851861013933 26079.163805106982 24634.22677179057 23775.77989991276 26223.21346001881 26460.716120547633 26898.402666465903 25234.394187534872 0.9309160653707101 0.9829307239026575 1.0224682167436494 0.9462819548412008 1.0334769129503971 0.9762162938692316 0.942197372491604 1.0391853779066504 1.0485972408887285 1.065942081532237 1.0 14.623103831229168 -8.280871160041874 24.745083596639933 1.0248076622716475 0.9794167946572904 0.4144939214780827 0.033997541364371296 677.952000026957 863324.2670017574 0.0054315679083801315 0.00657155593965275 5.237557935353141e-09 8.280871160041874 -0.04539086761435718 AQLGGPEAAKS(ph)DETAAK ddPTM_A549_PD325901_60min_R1 2 AQLGGPEAAKSDETAAK 17 1 P04792;C9J3N8 P04792 HSPB1 Heat shock protein beta-1 1 AQLGGPEAAKS(0.999)DET(0.001)AAK;AQLGGPEAAKS(0.999)DET(0.001)AAK 201.32 7.469199999999999e-49 106213000.0 20290.7 23631.0 21262.0 21949.7 26873.0 23718.0 22122.6 23529.0 25948.0 24108.5 26988.0 True False 22350.596926776157 25622.467303001707 22704.96717879258 23305.48311761443 24985.533186817138 23524.848471677848 22964.48764895121 23059.695636856577 24857.49579660066 22586.285195617642 23668.647091027542 0.9443123994716606 1.0825488759226476 0.9592845375348775 0.9846563273339445 1.0556384186525307 0.9939245103956869 0.9702492736755001 0.974271809798465 1.0502288407529552 0.9542702254485763 1.0 14.530689622975247 -8.757706332933276 24.999911287628535 1.0237191740564082 0.9980320158559377 0.0 0.04519602887377049 196.5690730072136 1316405.050261061 0.00680404487842198 0.007569290475974302 1.747003065573268e-09 8.757706332933276 -0.025687158200470517 AQLGINEDHS(ph)EGDEK ddPTM_A549_MK2206_60min_R1 1 AQLGINEDHSEGDEK 15 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 AQLGINEDHS(1)EGDEK 166.6 4.321699999999999e-21 23222000.0 2025.0 2509.9 2535.0 1932.2 2567.4 2584.3 2347.9 2845.7 3107.4 3140.0 2824.4 True False 2366.770493503315 2637.64318935032 2894.5011185093213 2405.5890867397547 2189.738861014215 2857.7689106804955 2774.4830382901328 3249.0866895907475 2403.5788614981348 2430.67181917529 2123.02353052556 1.1148112394766603 1.2423994135841558 1.3633862634545457 1.1330958193121132 1.0314246778377154 1.3460844260982106 1.3068545865826093 1.5304054066637818 1.1321489502771185 1.1449104469292295 1.0 11.051904646100576 -9.117626595268597 3.3480052896006853 1.0509076432957536 1.2569521474819532 0.2195058998615348 0.13484933096689494 0.19664350178009413 4.592013480253527 0.025987816559164566 0.025325661759853412 7.627345244020766e-10 9.117626595268597 0.20604450418619957 AQLGINEDHS(ph)EGDEKSEK ddPTM_A549_MK2206_60min_R1 2 AQLGINEDHSEGDEKSEK 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK 162.65 2.6033e-23 20394000.0 5317.0 5499.9 5604.5 4592.2 7358.3 5234.200000000001 5197.5 5258.4 7606.700000000001 8271.3 8069.2 True False 6214.379611830682 5779.821418027739 6399.302374234904 5717.289206151691 6275.903817481066 5788.079569819236 6141.818472470277 6003.794303174612 5883.794595403832 6402.807585332667 6065.394941409449 1.0245630617396553 0.952917571544756 1.0550512268452321 0.9426079029279393 1.0347065406465847 0.9542790907650655 1.0125999265998447 0.9898439196738403 0.9700596007745842 1.055629130037295 1.0 12.566385872540792 -6.646942961490448 0.8685476299591632 0.9867107864340938 1.0012371038442947 0.0 0.040052301050797205 2.436168706038702 3.278530357362136 0.005115703682105344 0.021289081051985327 2.254535294405492e-07 6.646942961490448 0.014526317410200829 AQLGINEDHS(ph)EGDEKSEK ddPTM_A549_PD325901_60min_R1 1 AQLGINEDHSEGDEKSEK 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 AQLGINEDHS(1)EGDEKSEK 170.56 1.2111e-30 13510000.0 3867.3 3568.9 4077.7 4563.8 4463.2 4277.7 4407.8 5406.9 4908.5 3882.4 5380.9 True False 4259.90544904421 3869.6637280556415 4354.43724320207 4845.695560858177 4149.72022920412 4242.863829466917 4575.5412410407125 5299.055137869003 4702.212814768547 3637.264601425472 4719.08341233549 0.9026976378313197 0.820003248499592 0.9227294503461733 1.0268298178819488 0.8793487774250657 0.8990864239390738 0.9695826162089943 1.1228992316638209 0.9964250266221522 0.770756582076471 1.0 12.204290956772407 -7.926913588617177 5.058899394226471 1.0092407254788558 0.9098161937866187 0.0552759888015838 0.0920484553764121 0.16241494923256994 7.735603469907599 0.009227707753791694 0.01280936492300896 1.1832769684044818e-08 7.926913588617177 -0.09942453169223708 AQLS(ph)PGIYDDTSAR ddPTM_A549_MK2206_60min_R1 2 AQLSPGIYDDTSAR 14 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 AQLS(1)PGIYDDTSAR;AQLS(1)PGIYDDTSAR 295.93 9.010399999999996e-117 82483000.0 11437.1 11139.6 10628.2 9975.9 13970.6 12047.2 10461.0 12452.9 17100.3 15846.5 16536.3 True False 13367.402869751493 11706.5580589214 12135.438575045662 12419.995947835168 11915.54324674191 13322.026707715857 12361.628290622713 14218.1367104068 13227.109353567794 12266.76464412777 12429.880331337561 1.0754249046187758 0.9418077846982518 0.9763117786782253 0.9992047885225835 0.9586209142095333 1.071774333508993 0.9945090347698059 1.143867545897508 1.0641381092157662 0.9868771313269564 1.0 13.601524786461415 -7.2594449671059404 24.985576044796048 1.040069068348612 0.9873019375156634 0.2036578044239047 0.052039963023532025 232.39031785991733 2911327.98598273 0.0075515470780641745 0.01266100037223826 5.5024364182375445e-08 7.2594449671059404 -0.052767130832948594 AQLS(ph)PGIYDDTSAR ddPTM_A549_PD325901_60min_R1 1 AQLSPGIYDDTSAR 14 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 AQLS(1)PGIYDDTSAR 203.53 1.1839999999999998e-31 63871000.0 6332.0 6012.5 5685.4 5596.5 6426.4 5688.7 5777.3 5864.3 6049.6 6594.8 5867.6 True False 6974.8199786279665 6519.194475870588 6071.245433087539 5942.183094426311 5975.031833876445 5642.3731132824705 5997.158312959866 5747.331936045645 5795.356350050689 6178.403202524394 5145.922397780988 1.3554071436513755 1.26686606830328 1.1798167488311846 1.1547362426197263 1.1611196928373781 1.09647458261624 1.1654195009909099 1.1168710858375936 1.126203603954414 1.2006405703258622 1.0 12.329213985577427 -2.0000000000000004 0.13708708190769414 0.9836948704665018 2.087242140321123 0.4775603847522777 0.06315436371197157 21.034983242863568 0.18482770160021514 0.09836791586876978 4.565242921848695 0.00999999999999999 2.0000000000000004 1.1035472698546211 AQLS(ph)VK ddPTM_A549_PD325901_60min_R1 2 AQLSVK 6 0 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 AQLS(1)VK;AQLS(1)VK 66.07300000000001 0.056491 75548000.0 26217.0 28505.0 29401.0 31003.0 33493.0 30845.0 32428.0 36285.0 29925.0 30865.0 35420.0 True False 28878.530540064683 30907.216388306188 31396.328662575488 32917.984897078335 31140.567224577342 30593.808546627155 33662.06528528248 35561.26720996818 28667.356316990692 28916.17863254615 31063.564545879482 0.9296592635855553 0.994966831403319 1.0107123609785518 1.059697603230948 1.002478874521439 0.9848775887081948 1.0836510805308621 1.144790294669686 0.9228611312346431 0.9308712330755944 1.0 14.92293576811555 AQLYLPS(ph)TSPPHEGLDGFAQELSR ddPTM_A549_MK2206_60min_R1 1 AQLYLPSTSPPHEGLDGFAQELSR 24 0 I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2 I3L465 CNTROB Centrobin 1 AQLY(0.008)LPS(0.359)T(0.316)S(0.316)PPHEGLDGFAQELSR 41.76 0.023063 6022000.0 849.55 885.62 786.56 644.8 1165.7 1041.0 1058.6 1001.7 1562.0 1430.6 1460.3 True False 992.9332704966625 930.6942752111369 898.1060354140792 802.7760289461723 994.2270741934519 1151.1579290401255 1250.9339172596508 1143.6940425775915 1208.2094940014447 1107.4264664051498 1097.667207770313 0.9045849811926183 0.8478838291085076 0.818195195279996 0.7313473731048666 0.9057636660322771 1.0487312738243022 1.1396294873385784 1.0419315020813753 1.1007065579153774 1.0088909084335866 1.0 10.100225007062186 -7.138534323732468 3.511161263256595 1.0560741185465061 0.8259206202646817 0.8075438609666864 0.053172991826903944 0.08634706707459883 1.9581569559652807 0.008674622910159299 0.015608223380522035 7.268849488169786e-08 7.138534323732468 -0.2301534982818244 AQLYLPST(ph)SPPHEGLDGFAQELSR ddPTM_A549_MK2206_60min_R1 1 AQLYLPSTSPPHEGLDGFAQELSR 24 0 I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2 I3L465 CNTROB Centrobin 1 AQLY(0.003)LPS(0.085)T(0.456)S(0.456)PPHEGLDGFAQELSR 64.028 0.00030010000000000003 6387700.0 1275.0 1424.1 910.74 1197.9 1896.8 1623.4 1340.0 1253.8 1750.4 2063.6 2164.0 True False 1490.1888292428278 1496.5806071770953 1039.896626694745 1491.385553775774 1617.7832326757657 1795.1871104742934 1583.4606547590529 1431.5299896014624 1353.9371948144224 1597.4313267675573 1626.619076638334 0.916126492456082 0.9200559790986936 0.6392994165812048 0.9168622052914556 0.994567969791164 1.1036309214965878 0.973467407029017 0.8800646753510022 0.8323627911782198 0.9820561861778371 1.0 10.667660723387561 -6.497879980411905 24.67422338272874 0.9390058691463623 0.8252219373850683 0.26168864576809914 0.0970571031661174 852.1671343703573 841103.312373757 0.015176681208122204 0.03511825403705069 3.177752138006125e-07 6.497879980411905 -0.11378393176129398 AQLYLPST(ph)SPPHEGLDGFAQELSR ddPTM_A549_PD325901_60min_R1 1 AQLYLPSTSPPHEGLDGFAQELSR 24 0 I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2 I3L465 CNTROB Centrobin 1 AQLY(0.004)LPS(0.122)T(0.437)S(0.437)PPHEGLDGFAQELSR 55.06100000000001 0.0040603 11021000.0 1739.6 1826.9 2004.7 1777.4 2213.1 2091.7 2222.2 1872.0 2166.5 1952.0 2112.3 True False 1916.202911374165 1980.8592745061067 2140.750997240403 1887.1859612317216 2057.659490780524 2074.6658887009235 2306.767037034499 1834.66149144441 2075.449539206696 1828.7503868695965 1852.5004909729314 1.034387262357905 1.0692894734218188 1.1556007718605694 1.0187235957171452 1.1107470690600698 1.1199273084193953 1.2452180435444782 0.9903703131980536 1.1203503315222725 0.9871794343812231 1.0 10.855258209554394 -10.85158714234331 0.8717620921881742 0.9938689222337244 1.0990409416826525 0.25573443932937845 0.06687926537416809 0.8204730006769 0.9944943925305311 0.05972836652104853 0.011509201696980786 1.4073848045230416e-11 10.85158714234331 0.10517201944892818 AQLYLPSTS(ph)PPHEGLDGFAQELSR ddPTM_A549_PD325901_60min_R1 1 AQLYLPSTSPPHEGLDGFAQELSR 24 0 I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2 I3L465 CNTROB Centrobin 1 AQLY(0.002)LPS(0.064)T(0.418)S(0.517)PPHEGLDGFAQELSR 82.62 3.6023000000000002e-06 11854000.0 2226.2 2319.1 2509.7 2454.0 2896.5 3300.2 3105.2 2667.2 2917.6 3120.6 2890.2 True False 2452.202185158179 2514.538695882158 2680.023334052098 2605.5780065616314 2693.0598323825357 3273.324265377821 3223.3700852306383 2614.000603622077 2794.983418227303 2923.5647834350707 2534.723722487322 0.9674435771452974 0.9920365969568643 1.0573236484417299 1.02795345443202 1.0624668118621774 1.2913929184225692 1.2716849795635905 1.0312763400726612 1.1026777369979355 1.1534056976301068 1.0 11.307612790897046 -5.815052998558255 1.3515752601765374 1.082451457630352 0.9609112173191386 0.18759547394506448 0.09394323262944326 1.0108692571721636 2.885198326881667 0.015524744572881716 0.12706226770578372 1.5309006288292624e-06 5.815052998558255 -0.12154024031121347 AQNEATS(ph)TPHR ddPTM_A549_MK2206_60min_R1 1 AQNEATSTPHR 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 AQNEAT(0.057)S(0.631)T(0.312)PHR 57.019 0.014049 2881800.0 515.21 502.32 452.9 237.29 612.35 315.6 388.32 510.35 527.16 566.03 791.05 True False 602.1648523248605 527.885942417807 517.1280302062611 295.42606065235265 522.2741261751398 348.99658252167507 458.87271750450356 582.6936753813261 407.7591017015373 438.1634298750918 594.6104531306624 1.0127047870659247 0.88778449762942 0.869692127818387 0.4968396688906415 0.8783466947567652 0.5869331436811874 0.7717198967635182 0.9799586810379909 0.6857583810621883 0.7368915692082658 1.0 9.215801015528204 -10.987371054878981 1.2040169115253705 1.002469130643869 0.7826604892893286 0.0 0.16878422398430049 0.6018547214261624 1.522906317013254 0.1113541986291334 0.02433255666157806 1.0295061495206185e-11 10.987371054878981 -0.21980864135454048 AQNEATS(ph)TPHR ddPTM_A549_PD325901_60min_R1 2 AQNEATSTPHR 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 AQNEAT(0.065)S(0.563)T(0.372)PHR;AQNEAT(0.051)S(0.475)T(0.475)PHR 79.693 0.0009408 9374700.0 1158.3000000000002 1053.91 945.47 879.75 1130.63 1123.9099999999999 980.0799999999999 807.7 987.36 1085.33 993.49 True False 1275.8897633046079 1142.7266943974664 1009.6352797729763 934.0901594427855 1051.2184492617525 1114.7572495911734 1017.3774807203548 791.5897898716078 945.8646928368896 1016.8020785764236 871.2970282519993 1.4643568403582239 1.311523690939255 1.1587727801602996 1.072068570366597 1.206498375612175 1.279422761061868 1.1676586143779497 0.9085188680830225 1.0855823699232492 1.1669982171479882 1.0 9.76702081231375 -2.0000000000000004 0.25597687339294367 1.0189985348930695 3.64648887755185 0.5333658766109712 0.09960997421675885 22.121811472540116 0.270325141647732 0.04256824983790185 25.638030528008013 0.00999999999999999 2.0000000000000004 2.6274903426587803 AQNEATST(ph)PHR ddPTM_A549_MK2206_60min_R1 2 AQNEATSTPHR 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 AQNEAT(0.015)S(0.15)T(0.835)PHR;AQNEAT(0.025)S(0.141)T(0.834)PHR 75.669 0.0011565 114437000.0 1249.4099999999999 1286.29 1107.63 762.7 1143.1100000000001 967.6399999999999 881.48 1504.83 1097.22 1524.6699999999998 1951.75 True False 1460.2798628582589 1351.7566668111976 1264.708589307487 949.5615342389048 974.9600332686607 1070.035022532552 1041.6335059380663 1718.1442608485959 848.7014219002981 1180.245988070697 1467.0766094403266 0.995367149514666 0.9213947370661698 0.86206035947227 0.6472474089823789 0.6645597285070185 0.7293654712010973 0.710006211833367 1.171134656358572 0.5784983663696119 0.8044883140226383 1.0 10.51872849389688 -11.206002602910711 1.6477663636633242 1.0000790787877891 0.7739521391155231 0.0 0.17656523450364617 0.5394582725475782 2.6351697411118624 0.13013729136264734 0.02705749084109746 6.222965554712438e-12 11.206002602910711 -0.22612693967226605 AQNEATST(ph)PHR ddPTM_A549_PD325901_60min_R1 2 AQNEATSTPHR 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 AQNEAT(0.001)S(0.022)T(0.978)PHR;AQNEAT(0.003)S(0.166)T(0.831)PHR 160.48 1.9534e-13 143054000.0 1161.79 762.24 983.06 1357.8400000000001 1223.37 1249.77 1090.24 1386.15 1048.33 1407.69 1709.22 True False 1279.7340655354053 826.4766398815129 1049.776363220009 1441.7106929216154 1137.4447115973833 1239.592287479923 1131.7296798022192 1358.5021508363607 1004.2723357657765 1318.808213162122 1498.9967756382887 0.8537270301935647 0.5513531805494314 0.7003192937309709 0.9617837185191541 0.7588039748204577 0.8269479345291396 0.7549914037142053 0.9062742314825167 0.669962972627574 0.8797938958878411 1.0 10.549781564695255 -10.965397410069988 1.1743042367390866 1.0027488974698642 0.7666854029301985 0.21267787868881738 0.11333812206867071 0.41928827513541433 1.0080352636163812 0.08164151270151207 0.01799782456818164 1.0829354981517078e-11 10.965397410069988 -0.23606349453966569 AQNEFKDEAQSLSHS(ph)PK ddPTM_A549_PD325901_60min_R1 1 AQNEFKDEAQSLSHSPK 17 1 Q8NEN9 Q8NEN9 PDZD8 PDZ domain-containing protein 8 1 AQNEFKDEAQS(0.034)LS(0.122)HS(0.844)PK 69.133 0.00066034 10107000.0 1933.7 2267.6 1863.6 1795.3 2230.4 2423.6 1792.5 2125.4 2291.1 1998.9 2226.6 True False 2130.007800485297 2458.6986101428924 1990.0751027371746 1906.1916035778715 2073.7443984622846 2403.8630051420187 1860.7145683936371 2083.007229655955 2194.813034514866 1872.689112865593 1952.742315580329 1.090777714750493 1.2591003895013153 1.019118132924646 0.9761613646454815 1.0619652075527413 1.2310190576413165 0.9528725595525683 1.0667087065386367 1.1239644970066607 0.9590047278250611 1.0 10.931285868007594 -10.951958683943625 1.140376768949116 0.9985978758708944 1.089142778363645 0.16379412265779958 0.09034060109888162 0.9203945303143092 2.072331241601242 0.06754592523875937 0.014750071894409073 1.1169695042075828e-11 10.951958683943625 0.09054490249275049 AQPEEEDEDEVS(ph)MK ddPTM_A549_MK2206_60min_R1 1 AQPEEEDEDEVSMK 14 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 AQPEEEDEDEVS(1)MK 45.973 0.013978999999999998 854890.0 570.72 353.58 495.25 458.86 706.66 524.52 471.35 501.43 599.54 750.15 882.46 True False 667.0435832356601 371.5757117377131 565.4838970184383 571.2807205990081 602.7112501068414 580.0243582518025 556.9881937467756 572.5092380649714 463.7451472686464 580.6905939981982 663.3208273430052 1.005612300623164 0.5601749506737109 0.852504359441777 0.8612434542230906 0.9086270553588053 0.8744250660350065 0.8396965251005984 0.8630955255215063 0.6991264681469777 0.8754294604681866 1.0 9.373563014960647 -11.073135427193725 1.401950030261394 0.9996319963019052 0.8120381953809034 0.06835022733651708 0.11588418774696162 0.44354376902104514 1.5612551683863485 0.07737669399738545 0.017218983539666163 8.450153007216319e-12 11.073135427193725 -0.18759380092100186 AQPEEEDEDEVS(ph)MK ddPTM_A549_PD325901_60min_R1 1 AQPEEEDEDEVSMK 14 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 AQPEEEDEDEVS(1)MK 61.211999999999996 0.00236 1425600.0 686.35 497.24 603.42 667.6 763.07 712.4 338.76 843.81 647.69 839.34 655.89 True False 756.0277467358346 539.1441598639319 644.3717098592331 708.8361357703934 709.4745956485898 706.5984505954672 351.651697176585 826.9795475938612 620.4698417026467 786.3439291573396 575.2196880292746 1.314328703396811 0.9372839127100484 1.1202184543906626 1.2322876815967374 1.2333976225314502 1.2283975414963653 0.6113345987536651 1.4376760128415038 1.0786658638691609 1.3670323626289376 1.0 9.167969245482578 AQPFGFIDS(ph)DTDAEEER ddPTM_A549_PD325901_60min_R1 1 AQPFGFIDSDTDAEEER 17 0 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 AQPFGFIDS(0.808)DT(0.192)DAEEER 61.265 0.0034376999999999997 1062900.0 1493.7 1036.6 1043.7 1077.6 1620.0 1250.1 1054.9 1410.0 1104.6 1059.1 1484.5 True False 1645.339324396177 1123.9579199480165 1114.5317582779521 1144.1609045928333 1506.2167886966024 1239.9196000693337 1095.0447967634295 1381.8764438763978 1058.1775033499723 992.2282452528638 1301.9159110208395 1.2637830987917318 0.8633106872983178 0.8560704641853878 0.8788285748007261 1.1569232512993635 0.9523807102849721 0.841102553163206 1.0614175863269548 0.8127848307194044 0.7621292871940186 1.0 10.34642055446293 -8.755826787056264 24.99315858292118 0.9115928385614963 0.9723355522719286 0.10241214164414525 0.140982258673669 401.89761107734006 1789665.690902819 0.02331502014538575 0.026082085489729605 1.754580154745004e-09 8.755826787056264 0.06074271371043227 AQPGS(ph)PESSGQPK ddPTM_A549_MK2206_60min_R1 2 AQPGSPESSGQPK 13 0 Q96PN7;Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5 Q96PN7 TRERF1;BCAR2 Transcriptional-regulating factor 1 1 AQPGS(0.988)PES(0.012)SGQPK;AQPGS(0.985)PES(0.014)S(0.001)GQPK 146.27 1.6446e-12 44377000.0 8413.1 9992.5 9169.099999999999 7672.0 11993.400000000001 9537.1 7952.9 8852.2 13134.4 14221.0 12851.8 True False 9833.0255994532 10501.07556858165 10469.416254723394 9551.640344409168 10229.186747560916 10546.309591785388 9397.838985994971 10107.026458725522 10159.479371326865 11008.46622308655 9660.343368364383 1.0178753719722131 1.0870292253762417 1.083751980184116 0.9887474989438579 1.0588843851098892 1.0917116700346656 0.9728265991839318 1.0462388419674535 1.0516685571029543 1.1395522708992922 1.0 13.237858753954248 -14.999999999999812 0.23099050885854974 0.7418343113634805 1.0518061091279518 0.0 0.05584073505483808 57.07576889610478 0.7155017790777578 6.7172705241276995 0.02171677183230818 1.0000000000004336e-15 14.999999999999812 0.30997179776447126 AQPGS(ph)PESSGQPK ddPTM_A549_PD325901_60min_R1 1 AQPGSPESSGQPK 13 0 Q96PN7;Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5 Q96PN7 TRERF1;BCAR2 Transcriptional-regulating factor 1 1 AQPGS(0.966)PES(0.017)S(0.017)GQPK 153.08 1.9584e-13 30558000.0 7370.4 6899.2 7558.4 7191.4 8506.2 7397.6 8559.3 7995.2 8953.2 7272.4 9047.4 True False 8118.6375821982965 7480.61979674451 8071.35847635151 7635.596445145603 7908.753856796937 7337.356398266459 8885.028845328674 7835.729463886936 8576.928139591686 6813.219422884452 7934.627156193963 1.023190809395586 0.9427815131685118 1.0172322300047598 0.9623131994532435 0.9967391915350643 0.9247260462060577 1.1197789978566044 0.9875359370566235 1.0809491070914816 0.8586691332516976 1.0 12.953946717861472 -7.745785267742806 24.999994979071623 1.040149207147048 0.978182519665844 0.0 0.06979080882333162 225.84820403104774 360684.09280099056 0.00675835117295987 0.010006167504078508 1.7956212330762316e-08 7.745785267742806 -0.06196668748120393 AQPGSPES(ph)SGQPK ddPTM_A549_PD325901_60min_R1 1 AQPGSPESSGQPK 13 0 Q96PN7;Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5 Q96PN7 TRERF1;BCAR2 Transcriptional-regulating factor 1 1 AQPGS(0.141)PES(0.772)S(0.087)GQPK 126.25 1.4176e-06 28859000.0 7422.1 7222.0 7971.1 7702.5 10087.0 8100.5 9524.4 8361.1 9086.6 9203.9 9688.0 True False 8175.586128138765 7830.623285611206 8512.066780118215 8178.2659313532895 9378.52391826088 8034.532213712219 9886.856253951662 8194.331301343944 8704.721801502676 8622.764183252595 8496.437417291945 0.9622369619883054 0.9216360812208567 1.0018395195608056 0.9625523651488195 1.1038183955988086 0.945635425662095 1.163647275719343 0.964443201178278 1.0245143198238393 1.0148682041373658 1.0 13.052642326170604 -6.1088833068423005 1.7766973355238587 1.0194731930638865 0.943751962034526 0.19737101234575016 0.06111390841693603 0.4453697432013667 2.6347792343742564 0.007891529677617954 0.03225518910201128 7.782456343795226e-07 6.1088833068423005 -0.07572123102936046 AQPQDSATFAHT(ph)PPPAQATPAPGFK ddPTM_A549_MK2206_60min_R1 2 AQPQDSATFAHTPPPAQATPAPGFK 25 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 AQPQDS(0.001)AT(0.005)FAHT(0.994)PPPAQATPAPGFK;AQPQDS(0.029)AT(0.025)FAHT(0.946)PPPAQATPAPGFK 112.35 9.5365e-13 9178100.0 1411.88 1873.43 2124.8999999999996 2014.0500000000002 2566.8 1629.74 1785.99 1866.9 3153.9 3312.8 2967.7 True False 1650.1708268481282 1968.7795849334934 2426.2427718818353 2507.492340414141 2189.2271202193983 1802.1980050661432 2110.481264770985 2131.538792141465 2439.546685743379 2564.4361791604765 2230.738185646756 0.7397420447929866 0.8825686481727065 1.087641206616274 1.1240639338798721 0.9813913323874346 0.8078931076098621 0.9460909748846636 0.9555306874901008 1.093605113069817 1.1495908375356796 1.0 11.12330548384075 -8.673369784610905 7.607487424280912 1.0441150652582334 0.9463451531315764 0.22387161652022358 0.11047720739023908 0.3609201303070747 27.080371749437294 0.019231365658445635 0.02179177310641869 2.1214373725814112e-09 8.673369784610905 -0.09776991212665698 AQPQDSATFAHT(ph)PPPAQATPAPGFK ddPTM_A549_PD325901_60min_R1 2 AQPQDSATFAHTPPPAQATPAPGFK 25 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 AQPQDSATFAHT(1)PPPAQATPAPGFK;AQPQDSAT(0.001)FAHT(0.999)PPPAQATPAPGFK 156.92 2.3473e-40 18545900.0 3618.6000000000004 3179.4 3838.4 3906.7 4611.9 4313.4 4551.1 4534.0 4571.1 4665.9 4706.1 True False 3985.957608127474 3447.3391961052685 4098.8969061742755 4148.007986240554 4287.976054191272 4278.273100503212 4724.29460095748 4443.565813145809 4378.9925634284455 4371.294277712525 4127.279534425848 0.9657590611152937 0.8352570179341712 0.993123163087251 1.005022303830358 1.038935215903126 1.0365842838649328 1.1446509889993877 1.0766331129456586 1.0609876377170593 1.0591224173820402 1.0 12.010975437878066 -6.03971321767371 2.675453243908204 1.0413924981829066 0.900991139385114 0.5836971074223558 0.048050396198956735 0.157045081454321 2.2071779113410974 0.007141454146592083 0.02477574362839855 9.126132761254664e-07 6.03971321767371 -0.14040135879779259 AQPS(ph)MSPK ddPTM_A549_PD325901_60min_R1 1 AQPSMSPK 8 0 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 AQPS(0.542)MS(0.458)PK 64.84100000000001 0.0032762 100950000.0 13644.0 13243.0 13965.0 14223.0 15404.0 14170.0 14580.0 15019.0 14759.0 14959.0 16262.0 True False 15029.128835818075 14359.034086312537 14912.748878366956 15101.522407223338 14322.076180915086 14054.604218048531 15134.849878482139 14719.434262822431 14138.730555805036 14014.486187081086 14261.877093311467 1.0537973884844678 1.0068123566319775 1.0456371753028733 1.0588734083471838 1.0042209792729073 0.9854666483305944 1.061210230564957 1.0320825348947615 0.9913653345418196 0.9826536924549433 1.0 13.799876255790636 -8.758696566822099 24.907619304931853 0.9959225179660133 1.030217434897541 0.35866858580854954 0.02339129923769053 59.32353895437955 538716.545657182 0.003891148848330918 0.004317542406091038 1.7430242654930182e-09 8.758696566822099 0.03429491693152775 AQPSAS(ph)LGVGYR ddPTM_A549_PD325901_60min_R1 2 AQPSASLGVGYR 12 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 AQPS(0.478)AS(0.522)LGVGYR;AQPS(0.34)AS(0.66)LGVGYR 79.875 0.00017047 3906000.0 4728.3 6788.8 5292.2 5894.1 5916.3 7001.9 5185.0 6282.8 4773.7 5489.7 5602.4 True False 5208.31353520951 7360.916001295672 5651.3605165838635 6258.165170527676 5500.75949812698 6944.878847872547 5382.3180123408665 6157.484625238749 4573.077989988924 5143.079405121936 4913.340316539674 1.0600351694908805 1.4981490243036444 1.1502074256000154 1.2737088757033472 1.1195559728704094 1.4134740116604885 1.0954498702690068 1.2532176133843076 0.9307472504183494 1.0467582283704013 1.0 12.26248845372871 -8.758687718437875 24.996897304159187 0.9672973035890408 1.238064656899442 0.4047696339360183 0.12878048960017002 39.46504733105396 358511.43265161436 0.019398147428241624 0.021519940052985437 1.743059778505898e-09 8.758687718437875 0.27076735331040125 AQPSMS(ph)PK ddPTM_A549_MK2206_60min_R1 4 AQPSMSPK 8 0 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 AQPS(0.016)MS(0.984)PK;AQPS(0.276)MS(0.724)PK;AQPS(0.045)MS(0.955)PK;AQPS(0.007)MS(0.993)PK 132.55 0.0010756 254411200.0 23843.6 25546.1 22719.1 21317.9 30561.0 24940.699999999997 21983.2 21978.9 34225.7 34222.2 35040.1 True False 27867.816759948462 26846.28737378472 25941.010004546406 26540.786456996895 26065.517383911898 27579.908319703238 25977.262884850134 25094.47638255828 26473.633597212043 26491.381251649855 26338.67611243755 1.0580568530089796 1.0192724668157283 0.9849018186717684 1.0076735194926485 0.9896289879051035 1.0471258388981652 0.986278231068085 0.952761493228897 1.0051239281806865 1.0057977530290596 1.0 14.684895211323774 -5.364607420891426 3.004331048820779 0.9996903913597708 1.0615928789383442 0.40048642894618036 0.021580955024835573 0.23201405125973965 3.2657058018313103 0.0028496235985807014 0.02969630029973983 4.319093234723237e-06 5.364607420891426 0.06190248757857342 AQPSMS(ph)PK ddPTM_A549_PD325901_60min_R1 7 AQPSMSPK 8 0 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 AQPS(0.477)MS(0.523)PK;AQPS(0.013)MS(0.987)PK;AQPS(0.036)MS(0.964)PK;AQPS(0.037)MS(0.963)PK;AQPS(0.135)MS(0.865)PK;AQPS(0.021)MS(0.979)PK;AQPS(0.02)MS(0.98)PK 121.36 0.0011821 497438000.0 49903.9 53042.3 53945.0 53187.6 65257.2 57958.0 56203.0 59641.8 59531.8 58859.7 64112.100000000006 True False 54970.10719069051 57512.36077296803 57606.03209763732 56472.8772541962 60673.759397118454 57486.00926391365 58341.835920461686 58452.19751091304 57029.88547341111 55143.28849694076 56226.71814008702 0.9776509995432118 1.022865332984185 1.0245312905176822 1.0043779740709013 1.0790912470820684 1.022396667731685 1.0376176638142907 1.0395804600453706 1.014284442697207 0.9807310531543575 1.0 15.778968221178342 -5.257083290178197 23.79163361491402 1.018064018694507 0.977650967860556 0.19880109662098555 0.024448326296507786 287.72911117719775 1571365.1814132696 0.0032521240605933015 0.03421283042697558 5.532439964008077e-06 5.257083290178197 -0.04041305083395086 AQPSS(ph)SEDELDNVFFKK ddPTM_A549_PD325901_60min_R1 2 AQPSSSEDELDNVFFKK 17 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 AQPS(0.276)S(0.362)S(0.362)EDELDNVFFKK;AQPS(0.056)S(0.517)S(0.428)EDELDNVFFKK 94.85600000000001 1.3788999999999998e-06 4367400.0 2178.19 2666.1000000000004 2158.3 2839.3 2681.7 3354.6 3180.1 3472.3999999999996 3348.8999999999996 3217.5 3610.1 True False 2399.3182453012723 2890.781603678765 2304.7752169122377 3014.677112481843 2493.3466433627627 3327.2812498140847 3301.120445717492 3403.1402579548976 3208.157379113454 3014.346500898016 3166.080586309417 0.7578197016450768 0.9130473861527454 0.7279584818145229 0.9521795261680122 0.7875183765518631 1.0509148959131749 1.0426520600871647 1.0748748066207034 1.013289867916181 0.9520751031835637 1.0 11.62848226154885 -7.2639621507966465 24.99813940603255 1.017959788660509 0.8338197648667195 0.6774341393575282 0.06676465957949833 93.00913706956548 921628.0532166824 0.008604093545007895 0.01414869869451508 5.4455010886722936e-08 7.2639621507966465 -0.18414002379378946 AQQEAEAAQR ddPTM_A549_MK2206_60min_R1 2 AQQEAEAAQR 10 0 A0A494C0X0;Q99426;K7EP07;K7EK42;Q99426-2 A0A494C0X0 TBCB Tubulin-folding cofactor B 0 ; 75.294 0.004305399999999999 3487000.0 826.5799999999999 804.94 668.61 988.0799999999999 930.8199999999999 801.21 707.5799999999999 682.39 1264.0 1377.53 1112.45 False True 966.0864960592445 845.908007823279 763.4289518132216 1230.159644356597 793.8976110497981 885.9935103998455 836.1381269361273 779.1208722317285 977.7060181932299 1066.3450162638649 836.1979629419201 1.1553322764149643 1.0116121364936086 0.9129763353253315 1.4711344668057273 0.9494134717294689 1.0595499506871964 0.9999284427749832 0.9317421313615949 1.1692279358747235 1.275230344393855 1.0 9.707700718618185 AQQEAEAAQR ddPTM_A549_PD325901_60min_R1 2 AQQEAEAAQR 10 0 A0A494C0X0;Q99426;K7EP07;K7EK42;Q99426-2 A0A494C0X0 TBCB Tubulin-folding cofactor B 0 ; 104.22 0.00097335 4887200.0 1680.19 1462.35 1140.47 1335.78 1368.97 1688.4099999999999 1552.47 1612.9 1722.88 1730.15 1776.9 False True 1850.761651909497 1585.587366617772 1217.869152403234 1418.2880968235104 1272.818269890115 1674.6601487505516 1611.5500953941819 1580.7294442044274 1650.4733450765902 1620.9080337307544 1558.3525646971561 1.1876398793421734 1.017476662558648 0.7815106670934313 0.9101201672544074 0.8167716977046651 1.0746349617462838 1.0341370315692098 1.0143593176628936 1.059114209753514 1.0401420515810906 1.0 10.605805953105067 -7.2993403129088685 24.998326828289308 1.0308738763023815 0.9360923755821176 0.17451678453520336 0.10123872710399132 770.0242718644591 507883.46330065286 0.015254606903848241 0.024386565066262883 5.019491083410623e-08 7.2993403129088685 -0.09478150072026392 AQQELVPPQQQAS(ph)PPQLPK ddPTM_A549_MK2206_60min_R1 2 AQQELVPPQQQASPPQLPK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 AQQELVPPQQQAS(1)PPQLPK;AQQELVPPQQQAS(1)PPQLPK 98.3 3.1302e-07 31515000.0 3053.1 3159.9 3310.0 2714.3999999999996 4537.1 2996.3 3407.4 3344.1000000000004 5562.4 4285.0 4594.9 True False 3568.3886388715905 3320.7254129758485 3779.4077720969813 3379.428121854046 3869.6986002600274 3313.3664772170323 4026.480473899998 3818.1364158767365 4302.525281327553 3317.015523938252 3453.859517211404 1.0331597510233004 0.9614535265339783 1.0942563683506212 0.9784497907380283 1.120398377807898 0.9593228852261473 1.1657916177062464 1.1054695180420784 1.2457151948094718 0.9603793980064256 1.0 11.75399368833258 -7.770236235784223 24.983921030450734 1.1214119633627613 1.02707636820462 0.11084039739885798 0.08679546360989195 247.06075391614144 701676.0428887168 0.015002164527966298 0.020897934144794197 1.6973201389371815e-08 7.770236235784223 -0.09433559515814127 AQQELVPPQQQAS(ph)PPQLPK ddPTM_A549_PD325901_60min_R1 2 AQQELVPPQQQASPPQLPK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 AQQELVPPQQQAS(1)PPQLPK;AQQELVPPQQQAS(1)PPQLPK 132.72 4.0196e-17 54855000.0 14101.3 13477.4 13574.4 13041.9 15913.9 15408.099999999999 15788.800000000001 15780.599999999999 16288.5 16402.8 17938.8 True False 15532.853595171593 14613.187796939419 14495.640413498339 13847.468542696068 14796.162563974594 15282.621542139274 16389.651423962874 15465.843553358787 15603.950989784562 15367.124408680644 15732.44132342244 0.9873136200448623 0.9288569711798844 0.9213853155719225 0.8801856150628049 0.9404873827144733 0.9714081386330375 1.0417741968350445 0.9830542657313622 0.9918327784609893 0.976779388066243 1.0 13.941454941714756 -7.348504346451427 3.290072184787891 0.9981290735863797 0.927535278114345 0.5588989721446915 0.028206077021081206 0.13084849926175066 2.7294608477437676 0.004049125551081935 0.006750660898077523 4.4822456410944886e-08 7.348504346451427 -0.0705937954720347 AQQNNVEHK ddPTM_A549_MK2206_60min_R1 2 AQQNNVEHK 9 0 P62081;A0A2R8Y623;B5MCP9 P62081 RPS7 40S ribosomal protein S7 0 ; 96.331 0.00096131 6926800.0 3321.3 2828.7 2403.2 2006.11 3453.6000000000004 2803.8 3204.3 3175.2 3466.7 4279.8 4461.1 False True 3881.854242011139 2972.668747645424 2744.0098966475725 2497.6070400576987 2945.5800149562574 3100.496254988189 3786.47983286898 3625.2943236421766 2681.497985182335 3312.9902075498103 3353.2857499035463 1.1576270355494744 0.8864943131467188 0.8183048213909301 0.744823801589095 0.8784160476156808 0.9246143890592596 1.1291849592531427 1.081117027902097 0.7996628337622183 0.9879832661577096 1.0 11.711359712143132 -7.32630438054218 6.037007687932324 0.9378678884987423 0.8837710308624795 0.03567353917074212 0.12839142266032313 0.7982865817473372 57.41674278970991 0.02159602971211091 0.03479305012463531 4.7173230608303456e-08 7.32630438054218 -0.05409685763626271 AQQNNVEHK ddPTM_A549_PD325901_60min_R1 2 AQQNNVEHK 9 0 P62081;A0A2R8Y623;B5MCP9 P62081 RPS7 40S ribosomal protein S7 0 ; 96.331 0.00096131 6527800.0 4095.7 4070.6 3621.6000000000004 3387.7 3972.3 3598.7 2579.5 3274.6 3946.3999999999996 4145.9 5063.7 False True 4511.492448905016 4413.64374777194 3867.3835544499652 3596.9505349750752 3693.299351691054 3569.39338034518 2677.6642840565614 3209.2855341259974 3780.5465319756754 3884.1271664562787 4440.897001439016 1.0158966639944869 0.9938631196223995 0.8708563952725742 0.8099603602176608 0.8316561610175349 0.8037550475024671 0.6029557279056232 0.7226660589259488 0.8513024577581145 0.8746267173495977 1.0 12.116635395657196 -5.741983559209176 4.9313628888118135 0.8667836558720452 1.00909884960776 0.23579211918331944 0.10310441203743402 0.27008591670718096 16.845148476507916 0.01821204934291536 0.07005025500662919 1.8114086645874716e-06 5.741983559209176 0.14231519373571477 AQQQEEQGS(ph)VNDVKEEEKEEK ddPTM_A549_MK2206_60min_R1 2 AQQQEEQGSVNDVKEEEKEEK 21 2 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK 270.18 9.341699999999998e-113 80757000.0 5994.799999999999 6744.1 6422.700000000001 5731.1 10251.099999999999 8221.9 7231.6 8539.7 11070.5 9864.5 8224.3 True False 7006.575681211691 7087.345883619869 7333.535437416105 7135.219757278854 8743.176769550055 9091.936000744488 8545.488112653402 9750.228626734408 8563.049425955822 7636.102598807214 6181.979330867214 1.133387108919499 1.1464525363635676 1.1862762789903003 1.1541966375804622 1.4143005502937445 1.470716014100465 1.3823223364699655 1.5772017512337162 1.3851630630985285 1.2352196909943427 1.0 12.593853115288955 -4.090789748509286 16.046428942125083 1.2449847184403753 1.21755948516543 0.0 0.17121673058292008 0.0 0.0 0.027883997694799996 0.0 8.113537569506194e-05 4.090789748509286 -0.02742523327494517 AQQQEEQGS(ph)VNDVKEEEKEEK ddPTM_A549_PD325901_60min_R1 2 AQQQEEQGSVNDVKEEEKEEK 21 2 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK 318.52 7.619499999999998e-185 130568000.0 21299.2 21303.1 21749.8 20362.5 25565.0 17760.6 22271.2 20063.3 22180.9 22074.5 21827.6 True False 23461.479104357673 23098.387000235954 23225.87222017227 21620.245378407184 23769.40259446211 17615.963562108154 23118.742703268257 19663.12174214562 21248.71390915753 20680.712302742268 19142.943576556732 1.2255941209109347 1.2066267085759594 1.2132863541746874 1.129410703842029 1.241679603735088 0.9202327474694862 1.2076900613958064 1.027173363569118 1.110002431140194 1.080330839404905 1.0 14.224525067094477 -2.000000000000015 0.11222699065790426 0.9588607032310222 1.8141036550078828 0.365935685875994 0.08119709882621513 60.8235363835696 0.45881099098465167 0.3257761058431549 8.116984201950377 0.009999999999999652 2.000000000000015 0.8552429517768606 AQRLS(ph)QETEALGR ddPTM_A549_MK2206_60min_R1 2 AQRLSQETEALGR 13 1 Q02818 Q02818 NUCB1 Nucleobindin-1 1 AQRLS(0.982)QET(0.018)EALGR;AQRLS(0.588)QET(0.412)EALGR 137.8 9.7121e-09 30393000.0 4783.1 5380.2 3960.8999999999996 4486.6 5784.4 4429.200000000001 4340.0 4091.6 6398.8 5581.9 7147.1 True False 5590.370344432445 5654.029199307781 4522.61517960693 5585.817201411125 4933.522422548346 4897.895004134988 5128.5218221300665 4671.596829999474 4949.482016783893 4320.944913202085 5372.277820074784 1.0405959132535376 1.0524454223458373 0.8418431308051699 1.0397483876463725 0.9183297267526029 0.9116980111923563 0.9546270676780962 0.8695746918640264 0.921300458120201 0.8043040695058351 1.0 12.391318198377611 AQRLS(ph)QETEALGR ddPTM_A549_PD325901_60min_R1 1 AQRLSQETEALGR 13 1 Q02818 Q02818 NUCB1 Nucleobindin-1 1 AQRLS(0.999)QET(0.001)EALGR 153.39 1.078e-13 15922000.0 6710.3 6874.5 6263.5 7061.7 8517.8 7490.3 7088.7 7732.2 8503.4 7619.2 8946.7 True False 7391.52471613823 7453.838241059845 6688.57877548524 7497.885170715674 7919.539112814757 7429.301480201048 7358.464357585482 7577.975205206442 8146.031669370053 7138.122411699196 7846.312617804067 0.9420380089580069 0.949979768094677 0.8524486725532943 0.9555934788657571 1.0093325997290157 0.9468525971477636 0.9378245191108485 0.9658008257294337 1.0381987139903008 0.9097422903469439 1.0 12.937799102000463 -8.600612150562812 4.5755465492840885 1.017903450929079 0.9426723021705972 0.0 0.047981255697144086 0.14119358542072744 5.567909641156284 0.006416234733899844 0.007304785695614324 2.5083483494410065e-09 8.600612150562812 -0.0752311487584818 AQRPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AQRPSPK 7 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQRPS(1)PK 78.334 0.0046903 10882000.0 1659.3 1390.4 1175.6 865.58 1353.1 1085.6 1169.1 1152.8 1171.8 1909.9 1823.5 True False 1939.3492740099005 1461.1654211214345 1342.3177573647174 1077.6471388573625 1154.0607824407311 1200.4774714370412 1381.5103369244835 1316.2129303019342 906.3891709800847 1478.4522635168432 1370.6746239602599 1.4148866843442258 1.0660191671891623 0.9793117446694887 0.7862165973013643 0.8419655272425843 0.8758296465491775 1.0079053867160073 0.9602665047515283 0.6612723071805872 1.0786310898827205 1.0 10.420670423896858 -5.171662761484259 1.2671211082307476 0.8575772389369939 1.7462403599544507 0.5946313383652346 0.1176831452190045 0.8680591707811073 1.0129893707709152 0.019229403884101666 1.0533903142882537 6.734994393221723e-06 5.171662761484259 0.8886631210174568 AQRPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AQRPSPK 7 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQRPS(1)PK;AQRPS(1)PK 66.692 0.0067149 29961000.0 7682.3 7031.5 6479.7 6592.299999999999 7694.0 5584.8 4951.7 5746.7 6563.1 7391.6 8020.5 True False 8462.201440589653 7624.0691820514 6919.45140760146 6999.491398800419 7153.599982859047 5539.3192404345355 5140.139653174211 5632.0775603010625 6287.275730795043 6924.893114541651 7034.029346138521 1.203037551333953 1.083883618745036 0.9837109097931244 0.9950898772753825 1.0169988822674114 0.7875030040179548 0.7307532283748573 0.8006900857462175 0.8938370059895437 0.9844845356443128 1.0 12.780135638596049 -5.4101055551633515 0.889799798425803 0.9138832636909637 1.316662082796572 0.5458255906610867 0.0893001062501765 1.315644177255527 0.8883641780254632 0.016159485991920484 0.48689206481865976 3.889505991608902e-06 5.4101055551633515 0.4027788191056083 AQS(ph)FAER ddPTM_A549_MK2206_60min_R1 2 AQSFAER 7 0 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 AQS(1)FAER;AQS(1)FAER 50.353 0.052392999999999995 5784800.0 1845.75 2107.8199999999997 1725.38 1779.85 2331.45 1520.4199999999998 1652.9099999999999 1648.23 1983.58 2136.13 2465.24 True False 2157.2674757450586 2215.0990347728566 1970.0648283446208 2215.9133299005025 1988.49679345314 1681.3098352268864 1953.2223513864062 1881.871649992677 1534.3022971263679 1653.576749393284 1853.0528708372842 1.164169414535009 1.1953782159340036 1.0631455040214075 1.1958176503076587 1.0730923141737758 0.9073188691411717 1.0540564611650078 1.015552054455074 0.8279862497571956 0.8923527090978959 1.0 10.855688329225645 -7.171375486605003 0.9424145271906038 0.9267770009650308 1.1664413755013825 0.635344966322817 0.07098075562900126 0.29520406241732167 0.5135236356374748 0.01443096388721471 0.03612963921649371 6.739450896428403e-08 7.171375486605003 0.2396643745363517 AQS(ph)FPDNR ddPTM_A549_MK2206_60min_R1 1 AQSFPDNR 8 0 Q99759;Q99759-2;J3KRN4;J3QRB6 Q99759 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 AQS(1)FPDNR 50.297 0.031591 4122800.0 2524.0 2109.1 2063.8 1581.4 2414.9 1849.1 2030.6 2155.7 2987.0 3165.1 3242.0 True False 2949.9894941246257 2216.444181305534 2356.477873128022 1968.8430709917448 2059.6714089986863 2044.7705346667592 2399.5337354878584 2461.2770765543733 2310.4492692588456 2450.101711742583 2436.9219253518822 1.2105391902117089 0.909526135510266 0.9669894831726116 0.8079220965224199 0.8451938437466673 0.8390792143952261 0.9846576168587653 1.0099942271227973 0.948101473921954 1.0054083744963629 1.0 11.250844315078286 -9.561582922384678 0.6275481765400784 0.9931093606393037 0.9328637123441813 0.03632052970743449 0.10385271619419938 1.862002350390092 1.6036175937866983 0.04695382612309462 0.025980832205498818 2.744208325712675e-10 9.561582922384678 -0.060245648295122356 AQS(ph)IER ddPTM_A549_MK2206_60min_R1 2 AQSIER 6 0 O14681-3;O14681;E9PLB8;E9PL33;E9PM05;E9PS58;E9PK61 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 1 AQS(1)IER;AQS(1)IER 101.25 0.032429 179270000.0 9855.5 10180.400000000001 9129.400000000001 6917.5 6783.5 4461.0 4131.4 4892.5 5955.1 14216.0 13597.0 True False 11518.867456158967 10698.538875995866 10424.08619775898 8612.287810538373 5785.656136048112 4933.06005902786 4882.021902292199 5586.026857652855 4606.279358340591 11004.595726559206 10220.48964189067 1.1270367526176674 1.04677361367755 1.0199204307231846 0.842649238177321 0.5660840467304493 0.4826637697286783 0.47767006017816216 0.5465517850296951 0.45069067331773 1.0767190332501022 1.0 13.319176693927337 -6.3950284091915925 2.645302174957907 0.6703880370580075 1.0716919944751826 0.44843145376025906 0.19748060139028756 0.24320414305783208 3.27995972225034 0.033575481820495724 0.08886397766680741 4.0269069162097884e-07 6.3950284091915925 0.40130395741717506 AQS(ph)IER ddPTM_A549_PD325901_60min_R1 2 AQSIER 6 0 O14681-3;O14681;E9PLB8;E9PL33;E9PM05;E9PS58;E9PK61 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 1 AQS(1)IER;AQS(1)IER 86.205 0.039468 258500000.0 9159.0 9634.099999999999 9295.6 9771.9 10434.4 8703.8 8686.5 9331.2 9458.1 10099.0 10536.3 True False 10088.81493750056 10445.999417876888 9926.455314983732 10375.488069404895 9701.52374072582 8632.91913853569 9017.069510935184 9145.08189581521 9060.608948428731 9461.347416493882 9240.401895108698 1.091815599799935 1.1304702475556132 1.0742449763184205 1.1228394811373996 1.0499027911179069 0.9342579723838016 0.9758308797919566 0.9896844314375607 0.9805427351839384 1.0239108129595682 1.0 13.173739885163933 -7.008272955932563 4.856917202738698 0.9857344270411907 1.1033786961935403 0.8419136071988542 0.024517262882819565 0.04723558091782845 3.1021036582246317 0.0031588595592571033 0.005825028269037895 9.811311041174554e-08 7.008272955932563 0.1176442691523496 AQS(ph)LKAPSIATIK ddPTM_A549_MK2206_60min_R1 2 AQSLKAPSIATIK 13 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 AQS(1)LKAPSIATIK;AQS(1)LKAPSIATIK 123.41 1.6401e-06 19848900.0 5239.1 6321.0 6207.0 5861.0 7278.0 6036.2 5617.7 5370.0 8093.799999999999 8044.4 7407.599999999999 True False 6123.331996302824 6642.711900826077 7087.245933959513 7296.945263110291 6207.415841108298 6674.946677494723 6638.363373313375 6131.213944935275 6260.567223142697 6227.1644529215555 5568.088480640533 1.0997188743664537 1.1929968289695574 1.2728328507351991 1.3104937697166186 1.114819899628143 1.198786028760603 1.1922158558352725 1.1011344317269116 1.1243656139642566 1.1183666485495942 1.0 12.442966421417529 -9.512961061904265 0.39375170945674337 0.9884978988323766 1.2148690648317197 0.34235622083194506 0.06769354317606217 0.6068313468470163 0.2183849658823377 0.053789005563464345 0.025436722919472222 3.0692971639558983e-10 9.512961061904265 0.22637116599934315 AQS(ph)LKAPSIATIK ddPTM_A549_PD325901_60min_R1 2 AQSLKAPSIATIK 13 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 AQS(1)LKAPSIATIK;AQS(1)LKAPSIATIK 184.01 1.0413e-25 40544000.0 9659.5 10464.7 10173.9 10881.7 12095.0 11122.900000000001 10786.0 11865.5 12256.1 12274.7 12017.9 True False 10640.125329051943 11346.596994867847 10864.362034630696 11553.837894866223 11245.488925484819 11032.318790185742 11196.467132325673 11628.83329419532 11741.018738735826 11499.673347186594 10539.77448774492 1.0095211563989064 1.0765502628221368 1.0307964413530089 1.0962130080013002 1.0669572616150815 1.0467319583558001 1.0623061380814476 1.1033284732720512 1.1139724813265832 1.0910739466539623 1.0 13.363556378508198 -5.2496618873420475 22.910520415353997 1.0610388835792628 1.0095210548772664 0.17948096298957072 0.03282456790155713 1022.4371668718145 1988806.5189091116 0.0059036375390479085 0.12108742736380028 5.627792970282753e-06 5.2496618873420475 -0.05151782870199639 AQS(ph)LLSTDR ddPTM_A549_MK2206_60min_R1 2 AQSLLSTDR 9 0 J3QRY4;O00231;O00231-2 J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 1 AQS(0.999)LLS(0.001)TDR;AQS(0.982)LLS(0.013)T(0.005)DR 73.273 0.0022719999999999997 7432000.0 1126.94 1914.9299999999998 1357.9899999999998 837.74 1794.84 1157.91 1084.54 1466.12 1632.52 1756.23 2044.13 True False 1317.1399209622844 2012.3917576726606 1550.5734019425925 1042.986337607577 1530.8214136101706 1280.439267641549 1281.5868794868531 1673.946999804192 1262.7568265987443 1359.4964232452924 1536.516105882031 0.8572249362828418 1.30971081264225 1.0091488113966054 0.6787994825533279 0.9962937633715259 0.833339307502096 0.8340861996699757 1.0894431847450563 0.8218311684236227 0.8847915215733315 1.0 10.585447174114508 -6.00179408767899 24.9971694202894 0.9056889220995816 1.102458368302633 0.21712701711574312 0.14246898104237635 71.20094660343567 992111.6528135168 0.018298305532585137 0.055724109689753894 9.958774814611197e-07 6.00179408767899 0.19676944620305137 AQS(ph)PARPR ddPTM_A549_MK2206_60min_R1 2 AQSPARPR 8 1 Q5TF21;E9PJP2 Q5TF21 SOGA3 Protein SOGA3 1 AQS(1)PARPR;AQS(1)PARPR 78.655 0.0011824000000000001 97003000.0 3138.3999999999996 2967.2 3006.3 3190.8999999999996 3611.8 2657.2 2902.5 2695.0 4278.4 4219.6 4165.5 True False 3668.0851934868147 3118.2178060640945 3432.638545394309 3972.670643244944 3080.509004522528 2938.3831402933915 3429.8466794314563 3077.024503091354 3309.349231200882 3266.3894293605254 3131.0913880485114 1.1715037151224739 0.9958884681445084 1.0963073637827416 1.2687814410044915 0.9838451270636628 0.9384533302059805 1.0954157047358326 0.9827322558633923 1.0569315363431382 1.0432111441487948 1.0 11.612449902100748 AQS(ph)PARPR ddPTM_A549_PD325901_60min_R1 2 AQSPARPR 8 1 Q5TF21;E9PJP2 Q5TF21 SOGA3 Protein SOGA3 1 AQS(1)PARPR;AQS(1)PARPR 77.37899999999999 0.0012485999999999999 127428000.0 4012.7 4658.4 3950.3 4097.8 5343.7 4606.4 4587.200000000001 4900.7 4489.3 5487.1 5179.0 True False 4420.06635000639 5050.979716656224 4218.3911130836395 4350.911799220964 4968.376946764214 4568.887005647051 4761.768406212154 4802.951693975226 4300.630332961284 5140.643569565656 4542.015832385939 0.9731508020051335 1.1120568274203757 0.9287486589115878 0.9579252824698793 1.0938704597500943 1.005916133772479 1.0483821681684404 1.0574493509531024 0.9468549850259209 1.1317978094464844 1.0 12.149117019607123 -8.766387531644277 24.999836843267254 0.9749037441747473 1.022646619239961 0.0 0.07180041915569389 179.00540194775292 904395.4490120687 0.00924958084959513 0.00999899150302786 1.7124285834220472e-09 8.766387531644277 0.047742875065213686 AQS(ph)PGAVEEILDR ddPTM_A549_MK2206_60min_R1 2 AQSPGAVEEILDR 13 0 H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9 H7BXT7 BET1L BET1-like protein 1 AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR 150.39 7.683399999999999e-13 24646000.0 1758.26 2088.1 1858.6399999999999 1520.65 2092.7 1917.1399999999999 1790.69 2379.3 2813.8 2629.0 2323.6000000000004 True False 2055.0113026701906 2194.375371003786 2122.223100160222 1893.2093182645729 1784.8666021829276 2120.010482305464 2116.0351939332004 2716.573061300652 2176.4787927152784 2035.1070740802027 1746.5859919024188 1.1765875325908393 1.2563798067644099 1.215069346713729 1.0839485298988623 1.021917392248642 1.2138025222544602 1.2115264886719774 1.5553617593953692 1.2461332008878712 1.1651914555111715 1.0 10.77032195919396 -10.635688398566272 1.0878512673734975 1.0088296961395404 1.218906192089475 0.09607905834100294 0.1340932941850834 0.510948178232019 1.138719110086615 0.07373527344219134 0.023488734919868515 2.3137242660615154e-11 10.635688398566272 0.2100764959499346 AQS(ph)PGAVEEILDR ddPTM_A549_PD325901_60min_R1 2 AQSPGAVEEILDR 13 0 H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9 H7BXT7 BET1L BET1-like protein 1 AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR 214.54 1.4477e-37 26692000.0 5080.0 5081.5 4643.9 5231.8 6418.299999999999 4966.6 5448.1 4624.5 5728.1 5095.7 4958.299999999999 True False 5595.717860301659 5509.735838525801 4959.06298003926 5554.956403720108 5967.500749932965 4926.153656270982 5655.430426814714 4532.260719649929 5487.367877004329 4773.956632362398 4348.4605332533665 1.286827330617426 1.2670543509345384 1.1404180725837385 1.277453563448599 1.3723249191980798 1.1328500324654909 1.3005592171221843 1.042267875030948 1.2619104703932709 1.0978498242895836 1.0 12.086289024902356 -14.23259497622517 0.2581145909460801 3.811013609652384e-07 1.2574328773714982 0.3666192390344831 0.09137671795205188 17.5107013134742 0.32344681620748267 8.947857858012469 0.040912627516000645 5.853357147632167e-15 14.23259497622517 1.2574324962701373 AQS(ph)PGAVEEILDRENK ddPTM_A549_MK2206_60min_R1 1 AQSPGAVEEILDRENK 16 1 H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9 H7BXT7 BET1L BET1-like protein 1 AQS(1)PGAVEEILDRENK 46.361999999999995 0.0081481 3758600.0 852.96 830.36 772.89 455.49 830.15 741.96 474.69 508.49 635.5 906.55 955.43 True False 996.9187951301659 872.6217772456804 882.4974238598302 567.0850704477231 708.0360346930556 820.4737147268127 560.9350285131155 580.5700146853148 491.5602646849666 701.7597253736808 718.1703624734577 1.3881369201823757 1.2150623624181247 1.228813482110863 0.7896247187013117 0.9858886855961331 1.1424499778868777 0.7810612325760613 0.8084015228444793 0.6844619193027948 0.9771493813205312 1.0 9.488182306722125 -5.60449861195875 0.6608183632142494 0.8512722381827532 1.5943057409595378 0.5936460990063472 0.13573495410188932 1.1940358136273148 0.4621862336746823 0.026398755830940125 0.606865128550654 2.486001509682918e-06 5.60449861195875 0.7430335027767846 AQS(ph)PGAVEEILDRENK ddPTM_A549_PD325901_60min_R1 1 AQSPGAVEEILDRENK 16 1 H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9 H7BXT7 BET1L BET1-like protein 1 AQS(1)PGAVEEILDRENK 118.32 1.419e-15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AQS(ph)PGAVEEILDRENKR ddPTM_A549_MK2206_60min_R1 2 AQSPGAVEEILDRENKR 17 2 H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9 H7BXT7 BET1L BET1-like protein 1 AQS(1)PGAVEEILDRENKR;AQS(1)PGAVEEILDRENKR 140.17 3.6613e-14 81598000.0 1586.49 1753.72 1552.92 1500.5 2014.7800000000002 1202.65 1234.38 1226.92 2191.32 1616.31 2048.8 True False 1854.2507260434918 1842.9768572562443 1773.1474070830354 1868.122567360005 1718.4085309629268 1329.9136247455403 1458.650867926477 1400.8396672849153 1694.9895188189785 1251.1844484239525 1540.0264159965889 1.2040382598525499 1.1967176914063573 1.1513746703725132 1.213045794510672 1.1158305553160934 0.8635654628592332 0.9471596414030005 0.9096205446439681 1.1006236654207708 0.812443497999533 1.0 10.588739382270852 -7.0080151715133185 19.173512546084705 1.0161687471271605 1.1857817826604535 0.5740080950287312 0.09079479663214599 11.259504632614737 26938.044675687546 0.011625354203396918 0.021203205901196932 9.81713647530507e-08 7.0080151715133185 0.169613035533293 AQS(ph)PGAVEEILDRENKR ddPTM_A549_PD325901_60min_R1 2 AQSPGAVEEILDRENKR 17 2 H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9 H7BXT7 BET1L BET1-like protein 1 AQS(1)PGAVEEILDRENKR;AQS(1)PGAVEEILDRENKR 166.34 8.292400000000001e-24 151498000.0 1859.72 1598.15 2078.38 2102.3 2285.0 2071.75 2000.77 2268.04 2303.1 2394.5 2772.6 True False 2048.5174053464953 1732.8317092079121 2219.4313651142356 2232.154296330285 2124.5094828220585 2054.878354886522 2076.9103972133535 2222.8021629570403 2206.3087162459897 2243.310861352072 2431.5877769594986 0.8424608088415375 0.7126338294785625 0.9127498444203618 0.9179821997301744 0.8737128484329625 0.8450767742614578 0.8541375379877751 0.9141360982396747 0.9073531036600283 0.9225703808057255 1.0 11.247682956476602 -14.999999946340587 0.04379819492201223 1.6559822758868636 0.5085586506989199 0.38942029775647125 0.05369516514253132 246.95770039846965 0.8293148542459966 20.298900651802413 5.67941345140697 1.0000001235553719e-15 14.999999946340587 -1.1474236251879437 AQS(ph)PPVK ddPTM_A549_MK2206_60min_R1 2 AQSPPVK 7 0 H3BTU1;A0A0C4DGM9;B7Z896;F5H3M2;Q9BVG8-4;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6 H3BTU1 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AQS(1)PPVK;AQS(1)PPVK 53.965 0.044122 15106000.0 2666.4 3075.9 3247.7 2519.7 3963.2 3097.8 3041.1 2794.9 4551.6 4268.0 4548.4 True False 3116.423132778884 3232.4501717688563 3708.272695298902 3137.026613113629 3380.2185300192923 3425.607139846782 3593.6285053639967 3191.085634022272 3520.669867411634 3303.855835745266 3418.906750546116 0.9115262158820461 0.9454630990601085 1.0846369807268257 0.9175525517367616 0.9886840375156052 1.0019598046362614 1.051104568672419 0.9333643374486733 1.029764812055568 0.9663486245179186 1.0 11.739319358980834 -5.538040648612808 24.95806024696271 1.00629740617336 0.9200104008292488 0.23678820016368374 0.04663880652121581 152.17448169602775 250495.08204907886 0.005655580976385104 0.02191954456684739 2.8970724180430486e-06 5.538040648612808 -0.08628700534411127 AQS(ph)PPVK ddPTM_A549_PD325901_60min_R1 2 AQSPPVK 7 0 H3BTU1;A0A0C4DGM9;B7Z896;F5H3M2;Q9BVG8-4;Q9BVG8-5;Q9BVG8-2;Q9BVG8;Q9BVG8-6 H3BTU1 KIFC3 Kinesin-like protein;Kinesin-like protein KIFC3 1 AQS(1)PPVK;AQS(1)PPVK 70.439 0.021265 60606000.0 16132.5 16477.8 15431.3 16418.4 17331.2 17500.7 16321.0 17443.9 15865.0 17867.199999999997 18167.1 True False 17770.259523881195 17866.44203484412 16478.560813945158 17432.52727910819 16113.916301394167 17358.1801015386 16942.1045861939 17095.967730025186 15198.249222023647 16739.061942764576 15932.661870735395 1.115335257099822 1.1213720707687038 1.0342628838569938 1.0941377793956515 1.0113762805066298 1.0894714418951896 1.0633568153048307 1.073013904941177 0.9539052134119099 1.0506130161156781 1.0 13.959699697692942 -8.751984765133487 24.898529036137514 0.978233017476356 1.0740318993642362 0.3827255689773068 0.038749182379326626 85.70227686075096 225695.08271296037 0.005665007990214915 0.006381994114672472 1.7701710540792232e-09 8.751984765133487 0.0957988818878801 AQS(ph)PSYVISTGVS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 AQSPSYVISTGVSPSR 16 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 2 AQS(0.771)PS(0.219)Y(0.01)VIS(0.21)T(0.264)GVS(0.425)PS(0.1)R;AQS(0.927)PS(0.072)Y(0.001)VIS(0.112)T(0.097)GVS(0.662)PS(0.129)R 58.693000000000005 0.007462899999999999 5171000.0 2215.1000000000004 2568.6 2367.9 1761.3400000000001 2844.3 2678.2 2292.7 2225.24 3217.4 3058.5 3437.8999999999996 True False 2588.9547260045397 2699.3307686223493 2703.703825845451 2192.8683790695586 2425.9072378214264 2961.6053463547205 2709.2539128105077 2540.6745845116898 2488.664037132041 2367.5827257794967 2584.174548786934 1.0018497888309634 1.0445620903934187 1.046254335688983 0.8485759524637906 0.9387551777259777 1.146054684171764 1.0484020570832913 0.9831667855812356 0.9630402243146743 0.9161852967288491 1.0 11.335487805221968 -12.134083640212909 0.002526079365538315 8.755716933336096e-06 1.9683129773119825 0.026636676718013286 0.07454261437111197 560870.470235328 198.6881374180394 79002.6578051597 75840.09886972701 7.343724227015013e-13 12.134083640212909 1.9683042215950493 AQS(ph)PSYVISTGVSPSR ddPTM_A549_MK2206_60min_R1 2 AQSPSYVISTGVSPSR 16 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 AQS(0.64)PS(0.186)YVIS(0.173)T(0.001)GVSPSR;AQS(0.965)PS(0.035)YVISTGVSPSR 169.58 6.2864e-28 25203000.0 7584.9 7355.7 6282.0 6316.7 9104.4 8650.7 8288.099999999999 8181.7 11695.5 11558.099999999999 13572.1 True False 8865.045686999154 7730.073711265056 7172.882061726059 7864.291783567435 7765.154820525756 9566.111332130084 9793.940487095897 9341.481030405394 9046.487923875728 8947.117182550921 10201.77299909572 0.8689710786335814 0.7577186545858495 0.7031015160170551 0.7708750022436808 0.7611573812918652 0.9376910594832898 0.9600233692676781 0.9156723082579291 0.8867564417163177 0.8770159053082233 1.0 13.316532284169497 -7.267400325858902 10.175402925968692 0.9433011150548773 0.7675893320249811 0.7141158783276669 0.049051396093029755 0.08029096234241123 121.58352406833019 0.008069638100516805 0.013281036154109794 5.402560937359888e-08 7.267400325858902 -0.1757117830298962 AQS(ph)PSYVISTGVSPSR ddPTM_A549_PD325901_60min_R1 2 AQSPSYVISTGVSPSR 16 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 AQS(0.889)PS(0.111)YVISTGVSPSR;AQS(0.921)PS(0.079)YVISTGVSPSR 175.8 2.8264999999999997e-28 43602000.0 8019.799999999999 7925.599999999999 7501.1 8228.3 8380.0 8672.2 8818.3 8810.5 9065.5 8406.2 9898.0 True False 8833.964192135278 8593.518126895622 8010.1697537786185 8736.543403174846 7791.417709430567 8601.576478458748 9153.885232058921 8634.767665796455 8684.508561125456 7875.431097388938 8680.608748591623 1.017666438839158 0.9899672218598573 0.9227659010755692 1.0064436327224515 0.897565819988682 0.9908955382713571 1.0545211167988748 0.9947191396222522 1.000449255650932 0.9072441029745384 1.0 13.083580503343278 -7.511747342701219 24.98106085407225 1.004259634148406 0.9655432582686099 0.03250367100126139 0.0462197767732285 635.9711119165498 1427244.0560966153 0.0050670874589186 0.007817705794441963 3.077886900642333e-08 7.511747342701219 -0.03871637587979615 AQS(ph)PTPSLPASWK ddPTM_A549_MK2206_60min_R1 1 AQSPTPSLPASWK 13 0 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 AQS(0.761)PT(0.216)PS(0.023)LPASWK 123.38 5.922200000000001e-06 3084900.0 2718.5 3004.5 2723.6 2449.1 3964.9 3031.5 2372.5 2424.9 4478.2 4195.9 3653.9 True False 3177.3163390561776 3157.416216742913 3109.8474344662686 3049.129609944275 3381.6684622712714 3352.2913178531617 2803.552539862576 2768.6370009447974 3463.894850215923 3248.0432758208917 2746.5357874902047 1.1568450531495247 1.1495995177358211 1.1322799610443306 1.110172903565397 1.231248643354272 1.220552571396311 1.020759515543933 1.008046941734842 1.2611868616433517 1.182596378541627 1.0 11.423397375025054 -7.73831425210336 24.995541726038184 1.1089960985305176 1.1647907454424453 0.1577953591486756 0.07994067971807717 582.3585865858528 629459.3985298843 0.016254815247640577 0.02410159050604413 1.826777895537869e-08 7.73831425210336 0.0557946469119277 AQS(ph)PTPSLPASWK ddPTM_A549_PD325901_60min_R1 2 AQSPTPSLPASWK 13 0 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 AQS(0.984)PT(0.016)PSLPASWK;AQS(0.993)PT(0.007)PSLPASWK 236.4 2.0264999999999999e-56 49999000.0 23658.0 19394.9 17652.4 20366.3 18298.6 22140.7 17647.7 15261.5 28522.0 23621.0 31526.0 True False 26059.742743900893 21029.376289407464 18850.398016504478 21624.28009577676 17013.36946274298 21960.393479925682 18319.292880691984 14957.097410084854 27323.319527926793 22129.566028814934 27648.5018597797 0.9425372440092323 0.7605973154009809 0.6817873211396733 0.7821139895913717 0.6153450754412246 0.7942706476936273 0.6625781379981777 0.5409731596286943 0.9882386997493724 0.8003893354166446 1.0 14.754913689375718 -8.797569302827828 20.049625980942906 0.9944474521774274 0.721243814277804 0.356418571328758 0.1152057635278506 9.68238512746393 5372.8533907755655 0.016610690140956685 0.017684558690534712 1.5937885305648208e-09 8.797569302827828 -0.2732036378996233 AQS(ph)SPAAPASLSAPEPASQAR ddPTM_A549_MK2206_60min_R1 2 AQSSPAAPASLSAPEPASQAR 21 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;Q8WUI4-10;H0YI15 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 AQS(0.5)S(0.5)PAAPASLSAPEPASQAR;AQS(0.733)S(0.267)PAAPASLSAPEPASQAR 295.03 1.3030999999999997e-144 41174000.0 3283.2 3403.4 2590.8999999999996 2698.0 3608.1 2172.2799999999997 2131.0 2591.56 3194.6000000000004 3478.3 3165.6 True False 3837.323893466707 3576.6185229032553 2958.3285790713226 3359.0101211178244 3077.3532696211696 2402.149227757238 2518.175115889209 2958.921566319639 2471.0282007279225 2692.549614215736 2379.494153884615 1.612663719808737 1.5031003615051077 1.2432594441309042 1.411648822769374 1.2932804497952948 1.0095209621909083 1.0582816989813535 1.243508651403529 1.0384678595212662 1.1315638703377546 1.0 11.216439194646084 -2.0000000000000524 0.2389635503546245 0.9839299785044788 4.8809364715615216 0.7493061739093025 0.0996510675077173 12.873168252630899 0.15416600633146388 0.04670656190016676 20.177252252567556 0.009999999999998793 2.0000000000000524 3.8970064930570425 AQS(ph)SPAAPASLSAPEPASQAR ddPTM_A549_PD325901_60min_R1 2 AQSSPAAPASLSAPEPASQAR 21 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;Q8WUI4-10;H0YI15 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 AQS(0.919)S(0.081)PAAPASLSAPEPASQAR;AQS(0.924)S(0.076)PAAPASLSAPEPASQAR 346.62 6.907499999999996e-231 74573000.0 6171.7 6144.5 7364.7 8018.0 7512.2 7459.0 8245.7 6956.3 6884.5 7667.5 7778.9 True False 6798.246440634593 6662.31857912463 7864.51282953878 8513.253649800798 6984.5689876830975 7398.256377023568 8559.494625720174 6817.55113938822 6595.168406493649 7183.37274145626 6822.144614509939 0.9964969704945102 0.9765724644644183 1.1527918673567605 1.2478852517570587 1.0238084037133572 1.0844473102033492 1.254663322075449 0.9993266816549228 0.9667294933130651 1.0529493505866219 1.0 12.736009621909654 -8.488960043048362 24.948598111756365 0.9842225483065408 1.105339013206056 0.22060415844633618 0.08824469023136036 567.6903786245955 417560.4084391813 0.014227306516473541 0.01719456335157258 3.2436945935548442e-09 8.488960043048362 0.12111646489951533 AQS(ph)SPASATFPVSVQEPPTKPR ddPTM_A549_MK2206_60min_R1 4 AQSSPASATFPVSVQEPPTKPR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 AQS(0.559)S(0.431)PAS(0.004)AT(0.005)FPVSVQEPPTKPR;AQS(0.812)S(0.188)PASATFPVSVQEPPTKPR;AQS(0.493)S(0.493)PAS(0.007)AT(0.007)FPVSVQEPPTKPR;AQS(0.75)S(0.239)PAS(0.011)ATFPVSVQEPPTKPR 234.83 2.7590999999999995e-98 108621800.0 10988.7 12485.7 12393.51 10112.599999999999 13292.4 10476.7 8798.91 9997.84 15180.199999999999 14623.900000000001 14349.3 True False 12843.323912078953 13121.16879926344 14151.096077813205 12590.187453971866 11337.10556833581 11585.337440129386 10397.558052064154 11415.064437100878 11741.908937798162 11320.350833260361 10785.972789466929 1.1907432146149244 1.2165030503393215 1.3119907081197624 1.1672741717155868 1.0510971786807297 1.0741115026215418 0.9639889006782882 1.0583249800378034 1.088627717405773 1.0495437967649317 1.0 13.396868678926781 -6.649644344786725 3.1917548865947847 1.0405128283696263 1.2383145408338911 0.8129445478336175 0.04261056584085682 0.08433982662318995 1.7046489319442366 0.00686660252345095 0.0152001763158606 2.240555237287209e-07 6.649644344786725 0.1978017124642648 AQS(ph)SPASATFPVSVQEPPTKPR ddPTM_A549_PD325901_60min_R1 5 AQSSPASATFPVSVQEPPTKPR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 AQS(0.788)S(0.21)PAS(0.001)ATFPVSVQEPPTKPR;AQS(0.393)S(0.393)PAS(0.193)AT(0.022)FPVSVQEPPTKPR;AQS(0.552)S(0.44)PAS(0.004)AT(0.004)FPVSVQEPPTKPR;AQS(0.574)S(0.422)PAS(0.002)AT(0.002)FPVSVQEPPTKPR;AQS(0.822)S(0.178)PASATFPVSVQEPPTKPR 296.71 6.117799999999998e-157 78495800.0 13779.900000000001 14387.3 14802.5 16317.4 17147.800000000003 16322.0 16474.4 17321.8 17479.0 17581.5 18104.6 True False 15178.825303773787 15599.76826323374 15807.086664663579 17325.288738495827 15943.397684698508 16189.079043541851 17101.342307137584 16976.303110310775 16744.41841485983 16471.401089522435 15877.848974515246 0.9559749137390444 0.9824862478709906 0.9955433314698203 1.0911609479535795 1.0041283117309197 1.019601525970309 1.0770566173406806 1.0691815457848606 1.0545772567641543 1.037382400850384 1.0 13.954727858529335 -6.018481239400086 14.281075074921484 1.0348702092148112 0.9741688943589674 0.49876585229311754 0.029099540430809565 2.3231069340449975 1797.7026340782393 0.004616342839255434 0.012670137465445342 9.58338113584855e-07 6.018481239400086 -0.060701314855843846 AQS(ph)VHSLVPQER ddPTM_A549_MK2206_60min_R1 1 AQSVHSLVPQER 12 0 O60336-3;O60336-6;O60336;O60336-4 O60336-3 MAPKBP1 Mitogen-activated protein kinase-binding protein 1 1 AQS(0.994)VHS(0.006)LVPQER 44.806999999999995 0.017305 2281900.0 280.65 432.02 305.79 252.74 503.61 377.57 384.98 433.83 430.93 550.86 525.66 True False 328.01685876627425 454.0079726933843 349.15562012976926 314.66131134592985 429.52963612813284 417.5242067893181 454.92588273816403 495.32673104865415 333.3250430538044 426.42034341111446 395.1241145220454 0.8301615788827614 1.1490262325359886 0.8836606202891943 0.7963606871389111 1.0870752260911878 1.0566912811544509 1.1513493254858838 1.253597826211688 0.8435957988972779 1.0792060715578597 1.0 8.626162086810957 -3.7323345345210073 16.520798755888208 0.9733287610251605 0.3031998173836842 0.0 0.15063687761129418 0.0 0.0 0.020086778300678315 0.0 0.00018521044085118742 3.7323345345210073 -0.6701289436414763 AQS(ph)YDIQAWK ddPTM_A549_PD325901_60min_R1 1 AQSYDIQAWK 10 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 AQS(1)YDIQAWK 85.845 0.0008052 3142000.0 2246.8 1864.7 2012.6 2105.2 1880.0 1922.7 1989.5 2450.2 1709.1 2292.3 2996.7 True False 2474.8934819932592 2021.8448131652183 2149.1871387469614 2235.2334227439046 1747.9552856479077 1907.0421686691527 2065.2115111961734 2401.328838855284 1637.2724705553492 2147.563786793635 2628.1248976464444 0.9416955351739912 0.7693107793224873 0.8177644603845181 0.8505050215633265 0.665095972879085 0.7256284396441584 0.785811782783088 0.9137042311062682 0.6229812259004776 0.8171467759073532 1.0 11.359818123843436 -11.085243274936277 1.4173149370528346 0.999737344656346 0.7673638761264261 0.05377580833859086 0.1062684836095297 0.3257124287003897 1.1707926187333202 0.07114964126933979 0.0156890253562397 8.2178219046106e-12 11.085243274936277 -0.2323734685299199 AQS(ph)YPDNHQEFSDYDNPIFEK ddPTM_A549_MK2206_60min_R1 2 AQSYPDNHQEFSDYDNPIFEK 21 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 AQS(1)YPDNHQEFSDYDNPIFEK;AQS(0.991)YPDNHQEFS(0.007)DY(0.001)DNPIFEK 107.23 2.0101e-10 48082000.0 2249.1000000000004 2161.14 1902.3799999999999 1631.19 3153.1 2712.0 2332.4 2871.7 3572.2 3399.1000000000004 3358.9 True False 2628.69309478435 2271.132795024724 2172.166089873673 2030.8316232269026 2689.283166886313 2998.982039920097 2756.1668889253847 3278.772269212409 2763.1024036312174 2631.2409492225247 2524.7924290760166 1.0411521614655495 0.8995324799258358 0.8603345228932773 0.8043558748986404 1.0651502024150534 1.1878133051189546 1.0916409829120262 1.2986304265861262 1.094387947227176 1.04216129568539 1.0 11.301949069020717 -6.845643110471385 7.93295054661571 1.0813260865995933 0.8986532166518704 0.520363428514304 0.09428306388040628 0.18704496671967782 15.382994028833915 0.015139682789357978 0.028725323866271264 1.426779594518764e-07 6.845643110471385 -0.18267286994772292 AQS(ph)YPDNHQEFSDYDNPIFEK ddPTM_A549_PD325901_60min_R1 1 AQSYPDNHQEFSDYDNPIFEK 21 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 AQS(0.974)YPDNHQEFS(0.026)DYDNPIFEK 173.96 1.0003999999999999e-35 27480000.0 3254.5 3238.4 3451.2 3586.4 3668.4 3076.3 3008.0 3650.2 3802.9 3428.9 4204.1 True False 3584.894444163727 3511.3113331657905 3685.419185751524 3807.9237826946337 3410.7442392929725 3051.2476327440163 3122.4710860407586 3577.393897473498 3643.0773379409825 3212.3986688202635 3687.022351985657 0.972300708248506 0.9523433811771613 0.9995651867330639 1.0327910761495287 0.9250674158392628 0.8275641809170908 0.8468815179162508 0.9702663981808739 0.9880811641890351 0.8712718183252175 1.0 11.84824044722919 -8.515977825215314 23.181245667828556 0.9935717895139129 0.9365721342630772 0.0 0.06731184117802343 177.85245549537774 597436.1833171264 0.010448810851284837 0.012083938919317257 3.0480506170730556e-09 8.515977825215314 -0.056999655250835723 AQSGSDS(ph)SPEPK ddPTM_A549_MK2206_60min_R1 2 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQS(0.002)GS(0.006)DS(0.842)S(0.15)PEPK;AQS(0.003)GS(0.129)DS(0.848)S(0.02)PEPK 96.734 0.00025566 6362100.0 2587.6 3003.2 2534.8 2214.3 3507.6 2407.1 2298.6000000000004 2475.8 3666.4 3632.6000000000004 3585.7 True False 3024.3236192539143 3156.0500522956636 2894.2727555019446 2756.8035994037027 2991.6366864896218 2661.8177242963375 2716.2258664396695 2826.7522318195092 2835.9662540377058 2811.9931370497316 2695.271729714452 1.122084866587579 1.1709580215980777 1.0738333814708085 1.0228295607492495 1.1099573573632102 0.9875878913991137 1.0077744060067138 1.0487819096885593 1.0522004971788725 1.0433059887982596 1.0 11.396215013428181 -5.956888507930509 3.590368209637284 1.0292353928538245 1.1460416453887585 0.6246832456338112 0.03316265347946497 0.10444298367669086 2.8055504556596444 0.004785806340770287 0.01623446536902184 1.1043620953255425e-06 5.956888507930509 0.11680625253493404 AQSGSDS(ph)SPEPK ddPTM_A549_PD325901_60min_R1 2 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQSGS(0.011)DS(0.969)S(0.02)PEPK;AQS(0.002)GS(0.038)DS(0.774)S(0.186)PEPK 124.3 6.4185000000000005e-06 22172400.0 3860.8999999999996 4633.5 4473.3 4992.5 5920.0 4532.4 5070.0 4588.0 4931.0 4817.1 5739.3 True False 4252.855725755645 5023.981306269661 4776.885038138124 5300.875386209839 5504.199622891288 4495.489637112432 5262.941624410454 4496.488740783625 4723.767218014407 4512.947483908573 5033.402484420279 0.8449266155288329 0.9981282684665534 0.9490369691126144 1.0531395815489544 1.0935345702888357 0.8931313661141087 1.0456031761220488 0.8933298608051821 0.9384839048011211 0.8965997648464131 1.0 12.29731824889088 -6.286863149834323 0.0017053525614727256 1.935284577645761 3.393565767288394e-05 0.0 0.07661202881331396 1110778.5311940177 393.19937061051706 221078.98807484552 225138.44229360044 5.165791224371524e-07 6.286863149834323 -1.9352506419880882 AQSGSDSS(ph)PEPK ddPTM_A549_MK2206_60min_R1 2 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQSGSDS(0.084)S(0.916)PEPK;AQSGSDS(0.073)S(0.927)PEPK 219.61 2.7635e-32 60705000.0 8822.2 10323.0 8982.4 8541.4 7008.6 5164.8 4353.71 5127.5 5533.1 13021.900000000001 14176.3 True False 10311.171677918494 10848.396606902019 10256.239387336536 10634.043383438016 5977.644224236283 5711.335707883228 5144.722751664952 5854.338827310174 4279.861684545068 10080.24374589768 10655.933464024027 0.967646026763446 1.018061593902381 0.962490937275752 0.9979457378689616 0.5609686138166754 0.5359770429465915 0.48280357314863875 0.549397089149934 0.40164117944190436 0.9459747266562841 1.0 13.379369358867221 -6.752164774610524 24.87489753436587 0.6574068827752969 0.9870704771513562 0.47646392251944003 0.1743339944485058 180.21879327649648 483350.6717785662 0.03357626508185833 0.06913768386851614 1.7694374929808237e-07 6.752164774610524 0.3296635943760593 AQSGSDSS(ph)PEPK ddPTM_A549_PD325901_60min_R1 2 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQSGSDS(0.018)S(0.982)PEPK;AQSGS(0.003)DS(0.032)S(0.965)PEPK 216.27 8.5273e-32 148516000.0 8136.7 9389.900000000001 9329.1 8672.2 10226.0 8426.5 9804.8 9008.3 9109.5 9947.5 10717.9 True False 8962.731794078049 10181.21982685692 9962.2288264356 9207.8620980048 9507.761037784849 8357.877377797167 10177.927029392433 8828.622389625365 8726.659394139577 9319.413152349027 9399.666246365952 0.9535159610101233 1.0831469501157158 1.0598492079745003 0.979594578856956 1.011499854206067 0.8891674617732778 1.0827966400751057 0.9392484965132287 0.9284009841853087 0.9914621336637403 1.0 13.198393816637362 -6.507503069917252 2.4554500845956038 0.9688399802298252 1.0361695454768132 0.13554715045768284 0.05650834980151536 0.34751229462930516 4.156912035436388 0.007940776205359452 0.020065282089531598 3.108113932194825e-07 6.507503069917252 0.06732956524698797 AQSLQLSLADS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 AQSLQLSLADSPLK 14 0 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 AQSLQLSLADS(1)PLK;AQSLQLSLADS(1)PLK 171.91 1.3099000000000002e-22 3995900.0 2444.8 2648.6 2470.8 2738.2 3470.4 2640.8 2694.6 2669.1000000000004 3699.6000000000004 3495.8 3688.8 True False 2857.422470378717 2783.402426914722 2821.196593141157 3409.059122922471 2959.908757211081 2920.247703178833 3184.173940532643 3047.4530987759313 2861.646507047211 2706.0963520614578 2772.7691542992084 1.0305302430057162 1.003834892853964 1.0174653698692735 1.2294781617996176 1.0674919520875767 1.0531881814434345 1.1483732555216677 1.0990648442733946 1.0320536430557867 0.9759544345282499 1.0 11.437111795085311 -8.941189436740045 3.425588204299889 1.0131140471131208 1.0821352420595742 0.24023625249320024 0.06187921560609461 0.283379808179978 6.415261044027761 0.011416889415435286 0.01180492222228828 1.145013384288659e-09 8.941189436740045 0.06902119494645342 AQSLQLSLADS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 AQSLQLSLADSPLK 14 0 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 AQSLQLSLADS(1)PLK 174.95 8.668899999999999e-23 3190200.0 2335.5 2155.3 2584.0 2268.9 2899.6 2249.0 2543.2 2209.5 2995.3 2509.1 3195.0 True False 2572.5982406957723 2336.9346950260087 2759.365778854293 2409.044799954232 2695.942099076953 2230.684889653573 2639.9828676924376 2165.429789180783 2869.4179574363325 2350.674997794316 2802.0352547737157 0.9181177275742478 0.8340133090919061 0.9847719703573578 0.8597482118934937 0.9621371089046735 0.7960945123203729 0.9421661855234705 0.7728060471372109 1.0240477711862546 0.83891699570502 1.0 11.452259392310632 -8.800175383049954 24.99996583813082 1.0113559470276388 0.8862831458770308 0.014122505136803132 0.08205473469356431 92.68431526260483 59817.44863114555 0.009783053870246878 0.010414940937758568 1.5842532872919525e-09 8.800175383049954 -0.12507280115060793 AQSLVIS(ph)PPAPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 AQS(0.031)LVIS(0.969)PPAPS(1)PR;AQS(0.001)LVIS(0.999)PPAPS(1)PR 67.646 0.0035726 5085700.0 2948.0 3115.7 2298.2 3058.6 3192.9 2738.4 2946.5 3336.7 2882.4 2968.8 3321.6 True False 3247.2787897971043 3378.2709735501007 2454.169672199278 3247.5227754154052 2968.641718907024 2716.099378313626 3058.630669886667 3270.146900909488 2761.262751816005 2781.349461341421 2913.0642573572363 1.1147295435024394 1.1596966888107387 0.8424701466852391 1.1148132991620285 1.0190786939935914 0.9323856730773598 1.0499702030814417 1.1225797346043445 0.9478894071224687 0.9547847955350945 1.0 11.508321809946793 -5.713618893725046 24.99996942455531 0.9924119749401519 1.1372136751892772 0.32010183128761804 0.0777538540310948 94.58152638775442 49444.702294257906 0.009994362291519236 0.038707828899330665 1.9336644205363073e-06 5.713618893725046 0.1448017002491253 AQSLVIS(ph)PPAPSPR ddPTM_A549_MK2206_60min_R1 2 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AQSLVIS(0.999)PPAPS(0.001)PR;AQSLVIS(1)PPAPSPR 143.97 5.1079e-13 38004000.0 12052.9 12225.099999999999 11990.0 12124.8 17801.2 13016.8 12627.3 11866.7 19183.4 18801.0 19276.7 True False 14087.134854886957 12847.30537237604 13690.362292278809 15095.37654430295 15182.66706110704 14394.229136147456 14921.516959581337 13548.841065244602 14838.390529594955 14553.841042138405 14489.763380145174 0.9722128985342905 0.8866470097075748 0.9448299418773286 1.0417959319465235 1.0478202205780205 0.993406776805712 1.0297971449297634 0.9350629620225623 1.0240602375831405 1.0044222711104471 1.0 13.822746415225629 -6.12167420064738 5.473005745215456 1.010294323890399 0.9264165189874651 0.49141014239066194 0.034091460939724205 0.12532749554840927 5.082688803891779 0.004476373901157471 0.01219013625403795 7.556588958311966e-07 6.12167420064738 -0.08387780490293384 AQSLVIS(ph)PPAPSPR ddPTM_A549_PD325901_60min_R1 2 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AQSLVIS(1)PPAPSPR;AQS(0.004)LVIS(0.996)PPAPSPR 171.08 1.4308999999999999e-22 82853000.0 17013.9 16219.7 17002.1 16808.0 21445.0 19097.199999999997 18958.199999999997 19074.1 18231.0 19945.1 20895.0 True False 18741.13860302882 17586.59104204211 18155.964747932892 17846.191986262384 19938.77718123371 18941.678734856483 19679.6646753251 18693.652112158015 17464.814470010268 18685.762982147928 18325.04746431824 1.0227061424818014 0.9597023459986109 0.9907731362380056 0.973868800122441 1.088061420853488 1.0336496411121947 1.0739216208658948 1.020114799078011 0.9530569841097012 1.0196842883235124 1.0 14.161529314686046 -8.736772264273231 23.72994127381826 0.9778324686737131 1.0202790470367928 0.0740986243854248 0.03955147732716823 162.1003846060755 155941.2824416805 0.006979231527915931 0.007911478154155386 1.8332755050027018e-09 8.736772264273231 0.042446578363079746 AQSLVISPPAPS(ph)PR ddPTM_A549_MK2206_60min_R1 5 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AQSLVISPPAPS(1)PR;AQSLVISPPAPS(1)PR;AQSLVISPPAPS(1)PR;AQSLVISPPAPS(1)PR;AQS(0.001)LVIS(0.031)PPAPS(0.968)PR 215.21 1.7144999999999997e-38 406175000.0 34040.5 38973.0 36167.1 33315.5 48410.8 37514.3 35513.0 38187.2 51905.8 52635.0 54445.4 True False 39785.704189678814 40956.55923285793 41296.13862060689 41477.79899558961 41289.63544939898 41484.038326023074 41965.25241228223 43600.35254339524 40149.21917653018 40744.71694340489 40925.10456340331 0.9721588891249068 1.0007685910589645 1.009066172491478 1.0135050218706232 1.0089072682864113 1.0136574791581494 1.0254158873868597 1.0653693621197058 0.9810413340381066 0.9955922502355748 1.0 15.320698482330997 -5.265917059794533 4.597824959860016 1.0032699075044615 0.9703131373606737 0.12641785642742143 0.021719178101129662 0.3247589091004274 18.000376734723783 0.0033966915139079594 0.03419268174546403 5.421044099256227e-06 5.265917059794533 -0.03295677014378784 AQSLVISPPAPS(ph)PR ddPTM_A549_PD325901_60min_R1 4 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AQSLVISPPAPS(1)PR;AQSLVISPPAPS(1)PR;AQSLVISPPAPS(1)PR;AQSLVISPPAPS(1)PR 245.23 6.5413e-58 690473700.0 45093.4 47158.7 48560.6 46931.1 54928.799999999996 52475.5 49070.1 55005.200000000004 52102.4 52515.5 57702.399999999994 True False 49671.24877199347 51132.92915247205 51856.21433460981 49829.92745873861 51070.79058207275 52048.15692619656 50937.489507689046 53908.07813525538 49912.71731897665 49199.66236764872 50605.37060565093 0.9815410534005031 1.0104249517493347 1.024717608308933 0.9846766630175467 1.0091970470891056 1.0285105375828336 1.0065629180868212 1.0652639727775386 0.9863126526219543 0.9722221530802259 1.0 15.627002881761133 -5.250454802543947 22.90521912823329 1.004072149632839 0.9815410115610639 0.0644936921714665 0.0244267459009195 1076.5166041015727 2244622.7743512513 0.0032256534757693868 0.05847090085436227 5.617527374763464e-06 5.250454802543947 -0.022531138071775203 AQSNGSGNGS(ph)DSEMDTSSLER ddPTM_A549_MK2206_60min_R1 2 AQSNGSGNGSDSEMDTSSLER 21 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AQSNGSGNGS(0.956)DS(0.044)EMDTSSLER;AQSNGSGNGS(0.796)DS(0.204)EMDTSSLER 204.82 5.484099999999999e-56 15779700.0 2108.17 2538.13 2593.2 2638.58 4411.0 2781.46 3038.45 3134.1000000000004 4969.9 3419.7999999999997 4043.0 True False 2463.97755619204 2667.3099757702416 2960.9547536561613 3285.0322184503584 3762.147743216368 3075.7922510162803 3590.4970346661516 3578.368272778708 3844.2255852994736 2647.2648048457495 3039.0115188765153 0.8107825656096697 0.8776899854451071 0.9743150808295683 1.0809541846240827 1.2379511297828798 1.0121028603910531 1.1814687151937857 1.1774776931749131 1.2649592018396283 0.8710940344919819 1.0 11.56938642783244 -5.989703276624586 1.6347408400508598 1.1346905526409545 0.8199691207693104 0.4421738494553762 0.1112988319955046 0.24176019535977578 1.1751710070777157 0.015174289163371135 0.07690019248501853 1.0239923764851802e-06 5.989703276624586 -0.31472143187164414 AQSNGSGNGS(ph)DSEMDTSSLER ddPTM_A549_PD325901_60min_R1 2 AQSNGSGNGSDSEMDTSSLER 21 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AQSNGS(0.012)GNGS(0.951)DS(0.037)EMDTSSLER;AQSNGSGNGS(0.844)DS(0.155)EMDTSSLER 200.29 1.3912000000000002e-55 43701000.0 1823.63 1982.3000000000002 2005.3799999999999 2124.1099999999997 2674.55 3046.9 2393.34 2282.68 2959.2 2304.1 2836.8 True False 2008.7635751145485 2149.3553778824544 2141.477146129576 2255.311450496179 2486.6988346966014 3022.0870565964747 2484.4198633859 2237.150156672182 2834.835114895199 2158.618732779834 2487.891583956831 0.8074160417873756 0.8639264635736431 0.8607598337238213 0.9065151653068627 0.999520578280854 1.2147181477217108 0.9986045531110286 0.8992152918151439 1.1394528335461374 0.8676498392050872 1.0 11.2807079024876 -6.729295336281326 2.669382945098132 1.05847784026895 0.8501025045221963 0.3523491070642436 0.0968098822897648 0.15863528958437956 2.306263951173853 0.01248776222312601 0.02749913232607947 1.8651109151964344e-07 6.729295336281326 -0.20837533574675382 AQSNGSGNGSDS(ph)EMDTSSLER ddPTM_A549_MK2206_60min_R1 2 AQSNGSGNGSDSEMDTSSLER 21 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AQSNGS(0.002)GNGS(0.013)DS(0.983)EMDT(0.001)SSLER;AQSNGS(0.01)GNGS(0.088)DS(0.897)EMDT(0.004)S(0.001)SLER 120.92 2.7911e-15 38879000.0 868.02 1080.6 893.71 525.21 1541.13 1419.26 985.8499999999999 1128.4 1600.73 1509.08 2074.3199999999997 True False 1014.5205549485167 1135.597924384221 1020.451516616555 653.8864735775726 1314.4318185225666 1569.445151171458 1164.9661839509047 1288.354155580069 1238.1672108405457 1168.177779898422 1559.2090956804202 0.6506635689588458 0.7283166366398469 0.6544673959660569 0.4193706125683062 0.8430118976114389 1.0065649023722318 0.7471519933909361 0.8262869676358876 0.7940995305060251 0.7492117530193365 1.0 10.606598696388204 -6.9348461849547265 10.411513768244726 0.8891318820959541 0.6247077296582972 0.5081298159003698 0.11006692191652205 0.2626238515256202 40.42505581291714 0.016648468590993677 0.03148441668789484 1.1618600395397925e-07 6.9348461849547265 -0.2644241524376568 AQSNGSGNGSDS(ph)EMDTSSLER ddPTM_A549_PD325901_60min_R1 2 AQSNGSGNGSDSEMDTSSLER 21 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 AQSNGS(0.011)GNGS(0.013)DS(0.934)EMDT(0.035)S(0.006)S(0.001)LER;AQSNGSGNGS(0.359)DS(0.641)EMDTSSLER 185.61 1.9315999999999997e-44 39354000.0 1736.62 1807.53 1965.17 2181.7 2430.4 2418.8 2061.48 3256.9 901.05 2240.8999999999996 2418.56 True False 1912.9203839679258 1959.856896627086 2098.538253727204 2316.4586539997995 2259.6970884248267 2399.1020947505835 2139.93074948514 3191.938574511379 863.1820019857798 2099.4091915656127 2121.0924525150294 0.9018562023073209 0.9239846638005983 0.9893667064058983 1.0921064054766305 1.0653458720035756 1.131069082776619 1.0088814124758088 1.5048559390830052 0.40695161635330157 0.9897773145514207 1.0 11.050591789961512 -8.774249151894866 24.999995934368336 0.7199494223191102 1.0687718160172253 0.22949898697109983 0.21373867294854604 212.5040135736658 414728.8187250438 0.04357176008041277 0.04653065538683574 1.6817089988530403e-09 8.774249151894866 0.3488223936981151 AQSPGT(ph)PR ddPTM_A549_MK2206_60min_R1 1 AQSPGTPR 8 0 Q14678;Q14678-2;Q5W0W3 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 AQS(0.004)PGT(0.996)PR 70.389 0.0070152 25070000.0 798.05 664.93 529.32 569.79 751.75 658.45 587.88 471.77 802.15 936.89 1018.1 True False 932.7413295507752 698.77209685434 604.3855353251887 709.3885755788447 641.1685708372037 728.1267419562641 694.6901863580233 538.6448422350312 620.4643057703324 725.2458983016355 765.2776718694488 1.2188273143684434 0.9130961512928418 0.7897597924799938 0.9269688658835737 0.8378247457173724 0.9514543135402984 0.9077622566211925 0.7038554266443049 0.8107701669312253 0.9476898712201779 1.0 9.579839497246091 -5.26723636635131 4.8474978306050405 0.8868976694425529 1.2354080047040805 0.5869147771282643 0.08197067374652303 0.1060142936991681 7.226720717458147 0.012964833773709555 0.1230955866694459 5.404600955130261e-06 5.26723636635131 0.34851033526152764 AQSPGT(ph)PR ddPTM_A549_PD325901_60min_R1 4 AQSPGTPR 8 0 Q14678;Q14678-2;Q5W0W3 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 AQS(0.028)PGT(0.972)PR;AQS(0.125)PGT(0.875)PR;AQS(0.044)PGT(0.956)PR;AQS(0.002)PGT(0.998)PR 70.908 0.0067561999999999995 86896500.0 4262.09 3740.67 3675.92 4235.1 4969.28 4803.3 4120.97 4227.06 4488.360000000001 4899.61 5771.129999999999 True False 4694.774239215176 4055.909388782505 3925.390036302663 4496.69250839004 4620.254915885337 4764.18351732904 4277.795768431311 4142.747972235581 4299.729837892346 4590.247788427324 5061.317596207273 0.9275794592959808 0.8013544520149899 0.7755668285357505 0.8884430630790018 0.9128561541657753 0.9412931369687427 0.8451940995832591 0.8185117597322825 0.8495277674561211 0.9069274356280373 1.0 12.305297290543429 -10.666725458691221 0.833978952525468 1.0042067497512137 0.8604324036081384 0.2207968734215886 0.05664340611423639 0.4538233504819526 0.5370083986209818 0.04154232468232108 0.009883014083501179 2.1541430561074205e-11 10.666725458691221 -0.14377434614307527 AQSPSYVISTGVS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 AQSPSYVISTGVSPSR 16 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 AQSPSYVISTGVS(0.991)PS(0.009)R 174.35 3.6347999999999996e-28 6499200.0 2934.0 2759.9 2588.7 2982.2 3761.3 2543.0 2817.5 2262.8 4230.5 3870.1 4276.4 True False 3429.187470587023 2900.3671215139843 2955.8165859901674 3712.8391338760457 3208.01775256398 2812.098572093219 3329.4032796892748 2583.5588295343655 3272.2985047203006 2995.8417220988163 3214.4518573642167 1.0668031822380084 0.9022897993850263 0.9195398522514738 1.1550458052031602 0.997998381968143 0.8748298922725447 1.035760816284029 0.8037323139917328 1.0179958045486228 0.9319914732072995 1.0 11.650357028409989 AQSPSYVISTGVS(ph)PSRGSLR ddPTM_A549_PD325901_60min_R1 1 AQSPSYVISTGVSPSRGSLR 20 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 AQSPSYVIS(0.068)T(0.354)GVS(0.49)PS(0.048)RGS(0.04)LR 129.24 2.8581e-17 10993000.0 2633.7 3056.4 3022.4 3414.3 3639.1 3666.5 3758.4 3691.2 3586.7 4577.7 4183.3 True False 2901.071285172533 3313.9735544367336 3227.518239167654 3625.193556562094 3383.502170213458 3636.6412396242004 3901.4279686753966 3617.57612030962 3435.9634720852305 4288.663240764829 3668.7806201235953 0.7907453689816973 0.9032901930028978 0.8797250567298636 0.9881194685442835 0.9222416166435903 0.9912397649717436 1.0634127173687382 0.9860431829766233 0.9365410003636244 1.1689614847072407 1.0 11.841084923856801 -5.00056321012596 0.7222021850252567 0.9782150391987577 0.6233684165922334 0.46454231537709134 0.06915207567436163 1.7936921139665496 0.5077991502703133 0.006763861047002941 0.5632478984367603 9.987040012923646e-06 5.00056321012596 -0.35484662260652433 AQSPSYVISTGVSPSRGS(ph)LR ddPTM_A549_PD325901_60min_R1 1 AQSPSYVISTGVSPSRGSLR 20 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 AQSPSYVIS(0.018)T(0.069)GVS(0.107)PS(0.203)RGS(0.603)LR 112.06 6.554300000000001e-11 7844900.0 3060.7 3430.4 3080.1 3386.4 3723.2 4156.6 3210.1 3811.4 3221.8 3977.4 4351.8 True False 3371.4200108317473 3719.4918469898475 3289.1341081459386 3595.5702369275923 3461.6952763427066 4122.75002771634 3332.2621121341226 3735.378637014541 3086.398950111299 3726.2662852126696 3816.5561883331 0.8833670577516721 0.9745675586697845 0.8618068085046284 0.942098074677626 0.9070206504295222 1.0802277823969286 0.8731070493133509 0.9787301568972802 0.8086868888623121 0.9763425720296115 1.0 11.898055715879552 -4.857460400780663 9.46836360193717 0.9228816770652323 0.00023040206353499047 0.0 0.07337486348126118 159467.8870547161 240808.38930571236 0.011286047942721604 3000683.123579288 1.3884799065496637e-05 4.857460400780663 -0.9226512750016973 AQSPT(ph)PSLPASWK ddPTM_A549_MK2206_60min_R1 1 AQSPTPSLPASWK 13 0 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 AQS(0.362)PT(0.63)PS(0.008)LPASWK 114.56 2.097e-05 3087500.0 2438.3 2211.5 2391.2 2091.7 2835.2 2628.5 2224.6 2276.9 3804.5 3188.1 3274.4 True False 2849.8254292884594 2324.0559039197733 2730.308116204927 2604.1665938999795 2418.1458357667298 2906.646125342911 2628.781024311186 2599.6575477138063 2942.786824538091 2467.905995768388 2461.276111157374 1.1578649857160384 0.9442483488075317 1.1093059018563525 1.0580554461544802 0.982476457966204 1.1809508539763582 1.068056124379741 1.0562234508875807 1.1956345780133926 1.0026936777149704 1.0 11.265190796116467 -7.245173662107617 24.649753753815443 1.095029030912402 1.048192407384861 0.0326370724267655 0.07878448964708108 1707.9997723361673 2588371.8718728265 0.012709539277550386 0.021968871630276547 5.686255080827058e-08 7.245173662107617 -0.04683662352754103 AQSS(ph)PASATFPVSVQEPPTKPR ddPTM_A549_PD325901_60min_R1 1 AQSSPASATFPVSVQEPPTKPR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 AQS(0.398)S(0.593)PAS(0.008)ATFPVSVQEPPTKPR 197.0 6.894799999999998e-61 68513000.0 4804.7 5081.5 4570.4 4516.7 6990.2 5435.7 5105.8 5866.2 5898.5 6067.3 5659.7 True False 5292.4696069668025 5509.735838525801 4880.57482804786 4795.686300830041 6499.232466880858 5391.433461400589 5300.104013000962 5749.194039055129 5650.606557586288 5684.209642548108 4963.592779794302 1.0662578180287645 1.110029787486743 0.9832746247668845 0.9661723903605123 1.3093806754933257 1.0861957659677346 1.067795898683817 1.158272705701974 1.1384105844840189 1.1451804962097774 1.0 12.277169044233883 -4.87675718084008 15.325539152049371 1.0800323739922981 0.00022323189634921052 0.0 0.09351392144708111 24000823.46419363 23860340.53720662 0.012964033851225644 895662685.8269789 1.3281368271194036e-05 4.87675718084008 -1.0798091420959488 AQSVS(ph)PVQAPPPGGSAQLLPGK ddPTM_A549_MK2206_60min_R1 2 AQSVSPVQAPPPGGSAQLLPGK 22 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQS(0.184)VS(0.816)PVQAPPPGGSAQLLPGK;AQS(0.163)VS(0.837)PVQAPPPGGSAQLLPGK 73.805 6.591399999999999e-05 6991700.0 4470.4 5230.3 5356.3 4822.5 5998.5 5120.4 4759.5 4812.0 6880.9 6592.0 7549.3 True False 5224.894229213438 5496.499929582451 6115.9038820794785 6004.012716490248 5116.128596164899 5662.237329353565 5624.239542034108 5494.115736131945 5322.387136539398 5102.862621657168 5674.600459919489 0.9207510319215616 0.9686144369819536 1.0777681927171752 1.0580502995580825 0.901583932172995 0.9978213214034631 0.9911252046305132 0.9681942852078602 0.9379316084246241 0.8992461509315789 1.0 12.470303102654265 -6.7434834174480365 24.99883579280676 0.9695400645932125 1.008709574950417 0.14810251163957844 0.05161189989711645 420.1136419993387 584892.1352949283 0.007047184890657831 0.014646241262989797 1.8051636619049554e-07 6.7434834174480365 0.039169510357204396 AQSVS(ph)PVQAPPPGGSAQLLPGK ddPTM_A549_PD325901_60min_R1 2 AQSVSPVQAPPPGGSAQLLPGK 22 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQS(0.156)VS(0.844)PVQAPPPGGSAQLLPGK;AQS(0.165)VS(0.834)PVQAPPPGGS(0.001)AQLLPGK 77.984 4.4937e-05 13597100.0 3958.8 4621.9 4638.5 4817.6 5701.6 4733.2 4888.1 4780.7 5101.6 5120.799999999999 5222.2 True False 4360.69446168547 5011.403733559461 4953.296503566424 5115.172210436557 5301.13928545219 4694.654388487456 5074.119320370957 4685.3451881134 4887.19749329189 4797.471814078802 4579.902506253303 0.9521369626823866 1.0942162473364871 1.0815288091402158 1.1168736023206627 1.15747863152417 1.025055529474148 1.1079098983969333 1.0230229097052017 1.06709640360663 1.0475052269187901 1.0 12.161101172232792 -10.458004438916083 0.4838917407757528 0.9891066321983754 1.077487362873767 0.07420144543703211 0.05402635476741945 1.6590279939643244 0.5923314747247874 0.06795085595443767 0.01324897952553308 3.483337547047794e-11 10.458004438916083 0.08838073067539154 AQSYPDNHQEFS(ph)DYDNPIFEK ddPTM_A549_PD325901_60min_R1 1 AQSYPDNHQEFSDYDNPIFEK 21 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 AQS(0.205)YPDNHQEFS(0.794)DY(0.002)DNPIFEK 133.95 3.668e-18 33033000.0 2279.2 2144.9 2321.1 2444.3 2823.8 2290.7 2427.3 2519.6 2602.9 2799.1 2867.1 True False 2510.5827061416417 2325.658250527206 2478.623803908167 2595.278859591929 2625.466029581149 2272.045298679163 2519.6722297695264 2469.3446014120364 2493.509164828576 2622.3643483026067 2514.464876044356 0.998456065169293 0.9249118063585074 0.9857460438291853 1.0321396350839889 1.044145040399775 0.9035899925766484 1.002070959023839 0.9820557148909946 0.9916659359948004 1.042911505062657 1.0 11.29603568555918 -8.617863332955064 0.002653730499301966 1.9793065126924814 3.4133922104689785e-05 0.06349594618258214 0.04083172119838769 41710.51307313171 89.85694535963025 33508.44181909555 33508.0474699168 2.4106639151389264e-09 8.617863332955064 -1.9792723787703768 AQT(ph)APTKT(ph)SPR ddPTM_A549_PD325901_60min_R1 1 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 AQT(0.987)APT(0.14)KT(0.764)S(0.109)PR 64.798 0.033453 3870400.0 1689.4 1744.9 2018.7 1886.7 2155.8 1701.0 2107.0 2444.4 1870.2 2165.5 2229.3 True False 1860.9066443294514 1891.9488467270821 2155.701121429242 2003.2371739934104 2004.384045106257 1687.1476199647516 2187.183037994639 2395.644524405295 1791.6019977956898 2028.7699604334575 1955.1102326970415 0.9518167381091153 0.9676942072556035 1.1025982501536442 1.0246159733049827 1.0252025750697662 0.8629424529364567 1.1187006243517315 1.2253245286842698 0.9163687897659893 1.037675485762664 1.0 10.933034236277589 AQT(ph)APTKTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 AQT(0.988)APT(0.015)KT(0.029)S(0.969)PR 80.507 0.001805 4799000.0 1991.5 1782.7 2147.1 1667.6 2134.2 2142.4 1665.1 1976.4 2017.1 2029.4 2238.0 True False 2193.675613935186 1932.9343853861938 2292.8151175611656 1770.603864605614 1984.3011545903005 2124.9530047104554 1728.466291677681 1936.9791515441948 1932.3283016542011 1901.2633376604297 1962.740187850883 1.1176597022437122 0.9848141885262331 1.1681704648192386 0.9021081218825757 1.010985135410625 1.0826460974629497 0.880639374674586 0.9868749636522726 0.9845053938443163 0.9686780499166484 1.0 10.938653497452668 -6.262791253261349 24.997054087671042 0.9870000678326905 1.079674721026812 0.3631346930607935 0.0653845304830515 106.70758459535978 1973116.6318665105 0.008239636302217577 0.02014275188051929 5.460202465513793e-07 6.262791253261349 0.0926746531941216 AQT(ph)LPTSVVTITSESS(ph)PGKR ddPTM_A549_MK2206_60min_R1 1 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 AQT(0.571)LPT(0.193)S(0.236)VVTIT(0.004)S(0.037)ES(0.289)S(0.669)PGKR 95.445 7.959399999999999e-07 12770000.0 5724.9 6658.3 5420.6 4922.6 8340.6 6575.3 5947.9 6571.7 9546.0 8091.3 8182.9 True False 6691.123159633145 6997.179030101297 6189.322588951335 6128.637220983911 7113.708788726007 7271.093881669104 7028.556439135346 7503.258599987184 7383.846241829567 6263.469710348098 6150.860093449087 1.0878353690339113 1.1375935924072755 1.0062531897845006 0.9963870300856227 1.1565388710925797 1.182126364638518 1.1426948967057535 1.2198714465930474 1.2004575180784325 1.0183079463990645 1.0 12.586572445649503 -6.777582374261815 24.99969135741479 1.1203196663634754 1.0591467152258975 0.1790897765199938 0.07419989280923085 474.92071593727445 735481.3775824076 0.013508701349358979 0.025585114922618363 1.6688512399213895e-07 6.777582374261815 -0.06117295113757781 AQT(ph)LPTSVVTITSESS(ph)PGKR ddPTM_A549_PD325901_60min_R1 2 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 AQT(0.682)LPT(0.276)S(0.042)VVTIT(0.006)S(0.056)ES(0.31)S(0.628)PGKR;AQT(0.608)LPT(0.139)S(0.253)VVTIT(0.012)S(0.053)ES(0.282)S(0.653)PGKR 104.65 5.518999999999999e-10 43249000.0 15703.5 17058.800000000003 17873.800000000003 20252.7 21991.0 21993.0 19190.9 24156.0 20469.7 20491.0 21234.0 True False 17297.7077596943 18496.40494386381 19086.823551890822 21503.663281781075 20446.42802483147 21813.896299755903 19921.22020116343 23674.189629984583 19609.42969429923 19197.19476298407 18622.352613416308 0.9288680178482026 0.9932367476780695 1.024941582200516 1.1547232365414966 1.0979508577289545 1.1713824108367639 1.0697477711173486 1.271278131256559 1.0530049613694776 1.0308683957124527 1.0 14.184747723622662 -5.652381518298512 2.2144734683283476 1.0690258663934598 0.9356411505866746 0.27926281832468935 0.0781659100096344 0.44528024637602615 3.910944742865479 0.012524948112190862 0.0845399968519526 2.2264783768612297e-06 5.652381518298512 -0.13338471580678513 AQT(ph)LPTSVVTITSESSPGK ddPTM_A549_MK2206_60min_R1 4 AQTLPTSVVTITSESSPGK 19 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQT(0.969)LPT(0.01)S(0.021)VVTITSESSPGK;AQT(0.959)LPT(0.03)S(0.011)VVTITSESSPGK;AQT(0.854)LPT(0.127)S(0.019)VVTITSESSPGK;AQT(0.931)LPT(0.066)S(0.003)VVTITSESSPGK 240.21 4.4318999999999986e-85 41736700.0 4808.110000000001 4022.58 4018.0600000000004 3458.6 6299.900000000001 4502.25 4574.83 5197.58 7716.599999999999 6365.2 6677.4 True False 5619.601420996656 4227.312140171646 4587.8813271154095 4305.957155262456 5373.193055427065 4978.675106648324 5406.017393441311 5934.352881921174 5968.802420878071 4927.296899176607 5019.217293135309 1.1196170822654923 0.8422253696713357 0.9140631017091391 0.8578941503791108 1.070524096013114 0.9919226078252412 1.0770638284250058 1.1823263539591082 1.18918988206418 0.9816863091214602 1.0 12.293246689604466 -7.242178943650112 1.4801183805904723 1.0977506499892848 0.9312334858083018 0.28550055420183895 0.09619629317167286 0.3430047184811248 1.4689411472025742 0.016090470632072827 0.03191924247257634 5.725600687449945e-08 7.242178943650112 -0.16651716418098306 AQT(ph)LPTSVVTITSESSPGK ddPTM_A549_PD325901_60min_R1 2 AQTLPTSVVTITSESSPGK 19 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQT(0.843)LPT(0.071)S(0.084)VVT(0.001)ITSESSPGK;AQT(0.876)LPT(0.117)S(0.007)VVTITSESSPGK 271.92 2.841399999999999e-111 57791000.0 10117.3 10703.4 12558.2 11602.5 12850.5 12904.0 12040.8 11792.7 13318.3 13951.2 12947.1 True False 11144.400848037394 11605.413081585566 13410.474970591324 12319.160073810652 11947.92521181832 12798.914102307564 12499.01923297858 11557.485347305817 12758.578166635827 13070.318851073318 11354.688778429043 0.9814800797718788 1.022081125079609 1.181051742789088 1.0849403549671792 1.0522459439413496 1.1271919778745654 1.100780433253571 1.017860160928588 1.1236396184520538 1.1510944162471037 1.0 13.47100054319264 -11.009702958978977 1.2658118531500189 0.9995824583510864 1.0831011467607299 0.0 0.07033871304538487 0.5502697945336427 1.5567330405667412 0.03984221201411579 0.008849732120036171 9.779058429318003e-12 11.009702958978977 0.0835186884096435 AQT(ph)LPTSVVTITSESSPGKR ddPTM_A549_MK2206_60min_R1 2 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQT(0.944)LPT(0.056)SVVTITSESSPGKR;AQT(0.767)LPT(0.232)S(0.001)VVTITSESSPGKR 281.75 6.326199999999998e-127 370360000.0 26992.0 22321.8 21809.3 21366.7 33257.0 28903.0 25012.0 22994.0 47951.0 41521.0 40977.0 True False 31547.589708958763 23457.88427588349 24902.18668398633 26601.542459187625 28364.939355281505 31961.49627574134 29556.356639427926 26253.469916171667 37090.17506201233 32141.37726241312 30801.279992333166 1.0242298280075166 0.761587969127337 0.8084789557506962 0.8636505517241196 0.920901318462801 1.037667794445457 0.9595820903152363 0.8523499647646622 1.2041764196567333 1.0435078435186305 1.0 14.910702685022256 -7.750224436314991 0.8143509126685354 1.0862105553843706 0.8565321009186728 0.29076963634894415 0.10233981109060944 0.44254273979738157 0.5916495152988503 0.022971046428799793 0.04192548556663557 1.7773606616198103e-08 7.750224436314991 -0.2296784544656978 AQT(ph)LPTSVVTITSESSPGKR ddPTM_A549_PD325901_60min_R1 4 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQT(0.977)LPT(0.022)S(0.001)VVTITSESSPGKR;AQT(0.988)LPT(0.009)S(0.003)VVTITSESSPGKR;AQT(0.877)LPT(0.12)S(0.003)VVTITSESSPGKR;AQT(0.984)LPT(0.015)S(0.001)VVTITSESSPGKR 284.9 3.3444999999999992e-127 644614000.0 34007.2 38225.8 39637.2 42510.3 47652.5 47017.0 43887.9 52313.1 56574.9 55463.0 56155.8 True False 37459.58590922252 41447.222319456785 42327.218749846536 45136.06468310389 44305.552792200484 46634.109140436674 45558.07805088041 51269.67418166696 54197.25369751437 51961.056714625185 49248.99260094579 0.7606162873776862 0.841585180336477 0.8594534936544808 0.9164870650011445 0.8996235344588476 0.9469048335323939 0.9250560396235495 1.0410299068875242 1.1004743617125996 1.0550684180619627 1.0 15.587806593773609 -7.067735489738948 0.6035800720017477 1.0481173171658813 0.798159885648624 0.8317513475592875 0.03980738212157242 0.330742962438859 0.21614780416932694 0.010681646809475677 0.03875175252028018 8.555876562060992e-08 7.067735489738948 -0.24995743151725736 AQT(ph)PENKPGHMEQDEDSCTAQPELAK ddPTM_A549_PD325901_60min_R1 1 AQTPENKPGHMEQDEDSCTAQPELAK 26 1 F5H527;Q76I76;A0A3B3IS79 F5H527 SSH2 Protein phosphatase Slingshot homolog 2 1 AQT(0.983)PENKPGHMEQDEDS(0.003)CT(0.013)AQPELAK 70.982 0.00010059 10928000.0 2065.8 2657.2 2452.0 2659.9 3014.3 3048.6 2922.1 2814.0 3009.5 3149.2 3194.2 True False 2275.518495238417 2881.1315694442096 2618.4074650738116 2824.195981928802 2802.5859667704744 3023.7732123601068 3033.302114534476 2757.8725624597073 2883.021180818162 2950.3589745541635 2801.3336497020964 0.8122982763871786 1.028485689218276 0.934700322238396 1.008161231429586 1.0004470431676395 1.079404880129743 1.082806439303311 0.9844855727031977 1.0291602291375583 1.053197991916427 1.0 11.45189810888274 -4.560692729101524 1.399267748424701 1.0175059404916442 9.442435229161708e-26 0.6582355921994527 0.04224548652707292 3.4461453040259418 1.4190250179577262 0.005728338325238872 7.998894407884479 2.749839023936376e-05 4.560692729101524 -1.0175059404916442 AQT(ph)PHEDGGPQPHR ddPTM_A549_MK2206_60min_R1 2 AQTPHEDGGPQPHR 14 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 AQT(1)PHEDGGPQPHR;AQT(1)PHEDGGPQPHR 124.84 6.964499999999999e-07 18913500.0 1384.3600000000001 1192.97 1215.45 887.76 1431.73 1052.15 1238.23 1118.85 1475.06 1385.08 1514.09 True False 1618.0061236475299 1253.6870774131457 1387.8190865846764 1105.2612398530605 1221.1244136012624 1163.4878146393555 1463.200363091269 1277.4504138344207 1140.9612651867926 1072.1894660201626 1138.0996662418368 1.4216734892739322 1.1015617652828198 1.2194178838198309 0.9711462648106969 1.072950330996568 1.022307491294988 1.2856522205326357 1.1224416030739552 1.0025143658590159 0.9420874971000398 1.0 10.152411188261521 -2.0000000000000004 0.6091013655505683 1.031177816714109 25.084900044373185 0.48866450325972355 0.10116660678913836 96.34270383984835 0.6615716355766216 0.016903580973363447 3101.9561514462616 0.00999999999999999 2.0000000000000004 24.053722227659076 AQT(ph)PHEDGGPQPHR ddPTM_A549_PD325901_60min_R1 2 AQTPHEDGGPQPHR 14 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 AQT(1)PHEDGGPQPHR;AQT(1)PHEDGGPQPHR 104.89 1.999e-05 20258200.0 1455.33 1199.0 1288.46 1379.54 1274.94 1282.0700000000002 1057.67 1341.4299999999998 1422.9699999999998 1376.17 1541.87 True False 1603.0740302426782 1300.0439378908657 1375.9026437393975 1464.7510526373405 1185.392612704225 1271.629246988954 1097.9202106292312 1314.6741263185222 1363.1675194114705 1289.278391341359 1352.2297647192324 1.1855041739711516 0.9614075742230077 1.017506550763642 1.0832116633237039 0.8766207072437514 0.9403943620875601 0.8119331782769889 0.9722268808300429 1.0080886806204188 0.9534462448466041 1.0 10.401124593277444 -5.257840544733704 24.287215534416603 0.9818342538750925 1.1855042914911522 0.42750193650596136 0.07105576852025773 184.86166513384015 1247477.9733589757 0.009943860803074621 0.10044802131321107 5.522801768737147e-06 5.257840544733704 0.20367003761605973 AQT(ph)PPGPS(ph)LSGSKSPCPQEK ddPTM_A549_PD325901_60min_R1 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(0.994)PPGPS(0.375)LS(0.286)GS(0.194)KS(0.152)PCPQEK 54.744 0.0046848 193900000.0 8482.5 9179.6 9440.5 9344.2 10062.0 10798.0 9558.7 9624.0 9394.7 9814.3 10336.0 True False 9343.637155513545 9953.197107809001 10081.189100338222 9921.370011782064 9355.27983201556 10710.064668065485 9922.461559221347 9432.04177011805 8999.87342994929 9194.623423081086 9064.737525302382 1.0307675351252776 1.0980127201727203 1.1121324883592736 1.0945016316345142 1.0320519271409887 1.1815085255552633 1.0946220485176545 1.0405201191750355 0.9928443493071877 1.0143286992498297 1.0 13.146049531170199 -8.488266727352961 2.967975089244731 0.9967158990760073 1.0939588287295707 0.5142220539394491 0.03842753569053032 0.13334225998995972 2.362773518663074 0.006267724243475934 0.007438354364647265 3.2488770228012397e-09 8.488266727352961 0.0972429296535634 AQT(ph)PPGPSLSGSK ddPTM_A549_MK2206_60min_R1 2 AQTPPGPSLSGSK 13 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQT(1)PPGPSLSGSK;AQT(0.999)PPGPS(0.001)LSGSK 143.46 2.3773e-12 114148000.0 46489.0 31252.0 23453.3 20391.8 29355.0 21984.0 20277.5 22287.0 30796.0 41391.0 60304.0 True False 54335.20665307436 32842.5933119153 26779.33060462907 25387.791915422673 25036.918386333346 24310.33228820184 23961.659273788573 25446.25050107497 23820.755171106586 32040.744352702026 45328.85249426897 1.1986892158795348 0.7245405851839656 0.5907789218360391 0.5600801811303852 0.552339558772171 0.5363103398938999 0.5286182630989412 0.5613698362272065 0.5255097771142188 0.7068509920199946 1.0 15.468142019225102 -10.82629471082286 1.0614017438643017 1.0009532449910536 0.6232743130522423 0.07376376638295035 0.2040103987817223 0.46788226764630375 0.931852865881091 0.13153632629260928 0.03214622063177439 1.4917817477813855e-11 10.82629471082286 -0.3776789319388113 AQT(ph)PPGPSLSGSK ddPTM_A549_PD325901_60min_R1 2 AQTPPGPSLSGSK 13 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQT(0.997)PPGPS(0.003)LSGSK;AQT(1)PPGPSLSGSK 167.92 1.5236e-21 203057000.0 31599.0 32564.0 30306.0 30733.0 36258.0 29253.0 31769.0 30464.0 31129.0 32190.0 36735.0 True False 34806.90721804567 35308.282563367924 32362.747404782585 32631.307610292817 33711.36316330949 29014.77326680124 32977.98667966387 29856.37162145431 29820.756384013486 30157.51790642022 32216.82788235131 1.0803952314968053 1.0959577613384508 1.0045292951548221 1.0128653177604914 1.0463898955668725 0.9006092521820193 1.023626124834268 0.9267321950653595 0.925626709523118 0.9360796791213825 1.0 14.975526830648771 -6.0918672811509325 0.7411224490519849 0.9624721714734931 1.1090172222435366 0.5583960272776138 0.04165888716607205 0.7197033477168093 0.5123239458067838 0.007211421467977124 0.0692102029208304 8.093431937918114e-07 6.0918672811509325 0.14654505077004354 AQT(ph)PPGPSLSGSKS(ph)PCPQEK ddPTM_A549_MK2206_60min_R1 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(0.937)PPGPS(0.072)LS(0.08)GS(0.21)KS(0.701)PCPQEK 41.733999999999995 0.042089999999999995 98801000.0 4363.1 4489.0 3240.4 4468.0 4260.5 4300.7 3592.2 3596.3 5633.3 6339.1 5509.3 True False 5099.484612446575 4717.470925930748 3699.9374455296256 5562.660200576141 3633.786093850222 4755.797219426385 4244.85624181005 4106.086538206843 4357.366544531585 4907.092907303844 4141.188761055256 1.2314059818773213 1.1391586324909866 0.8934481519714182 1.3432520277483477 0.8774741513893857 1.1484135338507282 1.0250332662277335 0.9915236361166334 1.0522018666498174 1.184947895505594 1.0 12.015829248884433 -2.0000000000000004 0.49329789102433147 1.0266951766944814 6.742770655190271 0.0900845323045587 0.13030224460941225 107.89312010543202 1.0427136441006357 0.02000873062994536 641.478813203868 0.00999999999999999 2.0000000000000004 5.71607547849579 AQT(ph)PPGPSLSGSKS(ph)PCPQEK ddPTM_A549_PD325901_60min_R1 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(0.999)PPGPS(0.011)LS(0.031)GS(0.084)KS(0.874)PCPQEK 82.65 7.1689e-05 190900000.0 8068.5 8818.1 9802.6 9854.1 9817.6 9847.7 10430.0 9452.5 8057.8 9054.7 11264.0 True False 8887.608180284236 9561.232234124647 10467.863383822407 10462.76537671515 9128.045644881335 9767.503596194529 10826.919357514993 9263.962472157202 7719.158687754306 8482.984696715226 9878.599408379065 0.8996830231566768 0.9678732620754694 1.0596505588579213 1.059134493078097 0.9240222492612559 0.9887538903449912 1.0959974091399596 0.9377809635948468 0.7814021369473578 0.8587234228285365 1.0 13.270090795113571 -8.516242887384534 24.92594484388447 0.8948163013756892 1.000662770565627 0.33749315598901874 0.07292831226770284 346.5426154627769 1301703.6293490906 0.0156457568608061 0.018064468671588434 3.0461908734124932e-09 8.516242887384534 0.10584646918993779 AQT(ph)PPISSLPTSPSDEVGR ddPTM_A549_MK2206_60min_R1 1 AQTPPISSLPTSPSDEVGR 19 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 AQT(0.989)PPIS(0.009)S(0.002)LPTSPSDEVGR 56.215 0.0085057 1519500.0 755.29 644.91 792.18 714.64 1029.5 915.0 744.52 780.34 1073.0 1121.6 1026.6 True False 882.7644869324041 677.7331643666738 904.5230359213864 889.7268320814092 878.0619137704034 1011.8246926721564 879.7896467770216 890.9555846910232 829.9672132289053 868.229781014969 771.6668872813834 1.1439709303096086 0.8782716681732421 1.1721677459921354 1.1529934052450483 1.1378768847576892 1.31121952924125 1.1401158469771322 1.1545857407849898 1.0755511567341143 1.1251354636633184 1.0 9.591834389883953 -9.372200708096768 1.182969826988194 1.018606015362826 1.1344779178390871 0.04379920448211716 0.1011212373957117 0.4846346273875892 1.4123097383010168 0.024617546822948984 0.019867173190045644 4.244233724266163e-10 9.372200708096768 0.11587190247626111 AQTAPTKT(ph)SPR ddPTM_A549_MK2206_60min_R1 3 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AQTAPT(0.113)KT(0.443)S(0.443)PR;AQT(0.004)APT(0.033)KT(0.481)S(0.481)PR;AQTAPT(0.11)KT(0.81)S(0.081)PR 102.87 0.00085509 660515000.0 3722.41 4265.3 3891.0 3123.2200000000003 4859.200000000001 3417.1000000000004 4069.29 3051.07 4680.9 5916.700000000001 5528.9 True False 4350.661803813169 4482.385551430704 4442.802308528508 3888.4090402066736 4144.418116943317 3778.695253912599 4808.627319257059 3483.568516009995 3620.683623861305 4580.113360673387 4155.921540122773 1.0468585034174258 1.078553940000101 1.0690293995293423 0.9356310032965164 0.997232040338491 0.9092316150417435 1.1570544036582087 0.8382180660482548 0.8712107745312112 1.1020692562300114 1.0 12.020952702440239 -6.283855379482162 0.7159583927542496 0.9416168445795854 1.0901969551943314 0.047855535474344735 0.09458850714670321 1.2299032339163622 0.8912525734514248 0.014731153025721271 0.11180981547781127 5.201691845798851e-07 6.283855379482162 0.14858011061474596 AQTAPTKT(ph)SPR ddPTM_A549_PD325901_60min_R1 2 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AQT(0.003)APT(0.023)KT(0.564)S(0.41)PR;AQTAPT(0.013)KT(0.694)S(0.293)PR 117.27 6.8107e-05 938922000.0 6542.5 6757.0 6523.4 6618.4 7546.6 6393.9 7035.7 7581.4 6908.5 6687.0 7818.6 True False 7206.68978366606 7326.436103693563 6966.1171523909015 7027.203536523027 7016.552850356654 6341.830198290786 7303.447413582769 7430.183029506759 6618.1597699559 6264.7816787894435 6856.961766188975 1.0510033495011684 1.0684668156995598 1.0159189142252711 1.0248275805143756 1.0232743144280907 0.9248746623558186 1.065114209852441 1.083596975287843 0.9651737891538807 0.9136381231816816 1.0 12.74335376254862 -2.000000838568825 0.23775997829683196 0.9861418801112234 1.4523888585975064 0.21473807873445472 0.048215644398224566 53.111127476682846 0.6349702726122498 0.02345284441077469 9.892569610353666 0.009999980691257881 2.000000838568825 0.46624697848628305 AQTAPTKTS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AQTAPTKT(0.005)S(0.994)PR 65.043 0.0016413 621920000.0 2718.1 2607.0 2767.2 2193.8 3027.7 2435.1 2259.9 1892.3 3098.7 3440.2 3677.2 True False 3176.8488288352387 2739.6851646026885 3159.6305700745534 2731.2810984834246 2582.3293407699366 2692.7806657114397 2670.494577380583 2160.5393199257046 2396.84939760709 2663.0564306773354 2764.04975444292 1.1493457466634918 0.9911851840578962 1.1431163874658112 0.9881446938837395 0.9342557371187379 0.9742156997655622 0.9661528607030475 0.7816571740262144 0.8671513216266842 0.963461828571194 1.0 11.432567869940362 -6.496169860371781 3.6982023932769565 0.9291741756388814 1.0840567242485044 0.5300105469356529 0.0687117310169384 0.16298081076212714 4.729510627538965 0.010929837377800166 0.025670974238790906 3.190289831403911e-07 6.496169860371781 0.15488254860962303 AQTAPTKTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AQTAPT(0.021)KT(0.291)S(0.688)PR 122.34 7.186900000000001e-06 21804000.0 1881.8 1951.3 2150.3 2319.0 2316.3 2542.7 2350.3 2608.8 2059.1 2402.8 2875.3 True False 2072.838950692057 2115.7428990879457 2296.23228880433 2462.2393631688774 2153.6110788011965 2521.9930942294973 2439.74195263351 2556.7654374359913 1972.5631877131354 2251.086797935586 2521.65632802844 0.8220148509740456 0.8390290443512347 0.9106047732522068 0.9764373264512148 0.854046229402323 1.0001335496028203 0.9675156465675183 1.0139230350374515 0.7822490185470223 0.8927016631547096 1.0 11.300155951432775 -5.7437676337762795 4.369622481043251 0.9178845171660606 0.8269834812418037 0.2280098416072468 0.06860261927997283 0.31077445730329334 13.718342210573663 0.012276946287996592 0.048297334015368946 1.8039826910077302e-06 5.7437676337762795 -0.09090103592425691 AQTGPLRS(ph)SLEESPFEA ddPTM_A549_MK2206_60min_R1 2 AQTGPLRSSLEESPFEA 17 1 Q86V88 Q86V88 MDP1 Magnesium-dependent phosphatase 1 1 AQT(0.002)GPLRS(0.498)S(0.498)LEES(0.001)PFEA;AQT(0.001)GPLRS(0.5)S(0.5)LEESPFEA 115.87 1.2412e-09 14492700.0 3738.2 4652.0 4218.9 3610.3999999999996 5156.4 3420.3 4218.7 4164.3 6018.3 5644.7 5521.3 True False 4369.116769784733 4888.766929701459 4817.203459123854 4494.948162077016 4397.900390641776 3782.233875788609 4985.183182262698 4754.602277633891 4655.164659250249 4369.55834958559 4150.208829872101 1.0527462469688251 1.1779568523187105 1.160713510233727 1.0830655387082144 1.0596817102278941 0.9113357979880661 1.20118851523342 1.1456296472147443 1.121669980976285 1.052852646386049 1.0 12.018968216360422 -10.745016396517444 1.0061702637170404 1.000213609686151 1.1028948571660466 0.11268099567454037 0.07668683348406559 0.7172542136505078 1.2945104058269088 0.05190939303893379 0.013433789631528852 1.7988030011607565e-11 10.745016396517444 0.10268124747989571 AQTGPLRS(ph)SLEESPFEA ddPTM_A549_PD325901_60min_R1 1 AQTGPLRSSLEESPFEA 17 1 Q86V88 Q86V88 MDP1 Magnesium-dependent phosphatase 1 1 AQTGPLRS(0.499)S(0.499)LEES(0.001)PFEA 128.59 4.5988e-12 8926900.0 3121.5 3004.6 3352.5 3874.2 4158.0 3840.8 3456.4 4269.3 3333.4 4367.6 4748.5 True False 3438.392382073154 3257.8081866446164 3580.020810220208 4113.500535053409 3865.9564243212785 3809.521798213183 3587.9351934146525 4184.1454622989395 3193.308790210754 4091.8289906207237 4164.464603221591 0.8256505240585419 0.7822873999515825 0.8596593203003186 0.9877621559974946 0.9283201546077763 0.9147686824534834 0.8615597766490942 1.0047259037961624 0.7667993594519786 0.9825582350862878 1.0 12.023915314724217 -11.165614152337646 1.5685616264096736 0.9998691861240623 0.8687422480014335 0.2393649426047999 0.07283562585296224 0.43796170495239867 1.937098860707985 0.05868077160149433 0.012489279445836913 6.829451853367523e-12 11.165614152337646 -0.13112693812262877 AQTGPLRSS(ph)LEESPFEA ddPTM_A549_PD325901_60min_R1 1 AQTGPLRSSLEESPFEA 17 1 Q86V88 Q86V88 MDP1 Magnesium-dependent phosphatase 1 1 AQTGPLRS(0.069)S(0.543)LEES(0.388)PFEA 145.33 2.0735e-16 7867700.0 2579.8 2782.2 2732.0 2976.4 3593.9 3976.4 3267.6 2851.8 3324.1 3489.2 4176.5 True False 2841.6993968516176 3016.6657581317486 2917.4099488505913 3160.245468105148 3341.476862281926 3944.0175167712164 3391.950306099327 2794.9186118061807 3184.399636869132 3268.8913165294043 3662.816977014841 0.7758234753972266 0.8235917265487561 0.7964935095469201 0.8627909851724878 0.9122696774779055 1.0767716600422528 0.926049629939122 0.763051670161257 0.8693854093316957 0.8924528135155466 1.0 11.838737899181162 -14.999853883603837 0.018862505996211663 2.089440512486302 3.371989390528384e-06 0.17066602523775043 0.08305662647342538 2701.9363624282064 3.9602017333046104 288.6410369660814 165.95198180686043 1.0003365020397602e-15 14.999853883603837 -2.0894371404969116 AQTLPTS(ph)VVTITSESSPGK ddPTM_A549_PD325901_60min_R1 1 AQTLPTSVVTITSESSPGK 19 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQT(0.399)LPT(0.199)S(0.402)VVTITSESSPGK 189.11 1.069e-43 36240000.0 5937.3 6470.9 7396.1 6984.7 7098.2 7618.0 7992.7 7462.7 8086.6 8109.6 8478.9 True False 6540.050325190749 7016.225452625528 7898.043822362323 7416.129055595361 6599.646919460627 7555.961533739846 8296.866572273262 7313.850594125104 7746.748323909008 7597.558472007009 7436.049052175538 0.8795060763184921 0.9435421153620304 1.0621290643653865 0.9973211585291588 0.8875206273054091 1.0161258325117188 1.115762754395209 0.9835667493324721 1.0417828432213703 1.021719789460536 1.0 12.860320571742637 -7.491494049077606 24.798541743108764 1.0253377203684788 0.9608347873634093 0.3073553741986138 0.05618733277466008 704.1568257363609 556388.2687433421 0.008456537139755601 0.013510357207380023 3.224823507174488e-08 7.491494049077606 -0.06450293300506948 AQTLPTSVVTIT(ph)SESSPGK ddPTM_A549_MK2206_60min_R1 1 AQTLPTSVVTITSESSPGK 19 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVTIT(0.276)S(0.276)ES(0.276)S(0.171)PGK 103.13 2.1546e-09 5712200.0 818.19 1056.2 1038.6 892.95 1783.6 1122.3 1094.0 1056.4 1186.7 1652.0 1712.5 True False 956.2804691750498 1109.9560686050477 1185.889097311156 1111.7227900860482 1521.2348027206328 1241.0610410775528 1292.7656390346299 1206.147935089316 917.914344770496 1278.812052636172 1287.2389874044106 0.7428927173059715 0.8622766086685765 0.9212656770926302 0.8636490977698917 1.1817811747514355 0.9641263613216291 1.0042934153520033 0.9370038873056458 0.7130877434200303 0.9934534807827482 1.0 10.330064212295996 -5.297455251389048 2.5022753308528953 0.9067134256353979 0.7141765816652045 0.14527301976799756 0.11492707006366397 0.8705498704063598 7.1505712640148795 0.019444274518946196 0.3426321289845596 5.041325609775867e-06 5.297455251389048 -0.19253684397019344 AQTLPTSVVTITSES(ph)SPGK ddPTM_A549_PD325901_60min_R1 2 AQTLPTSVVTITSESSPGK 19 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVTITS(0.044)ES(0.478)S(0.478)PGK;AQTLPTSVVTITS(0.001)ES(0.704)S(0.296)PGK 272.31 2.3412999999999994e-111 11443800.0 4227.1 4363.8 4636.5 4247.0 4242.1 4236.0 4535.9 4508.4 4324.299999999999 4426.9 4491.700000000001 True False 4656.23208017345 4731.552740757433 4951.160771539447 4509.327544363182 3944.149530450525 4201.503420441325 4708.516156639719 4418.476425228621 4142.564709158327 4147.38477850052 3939.249375232267 1.182009981254083 1.2011305429168089 1.2568792426977322 1.1447174613303839 1.0012439312040176 1.0665746237996407 1.19528258003775 1.121654407819281 1.051612709569592 1.0528363105359333 1.0 11.943705034699326 -2.000000000273498 0.10344692408756047 0.9254127991482083 1.8055211724685407 0.4434112670840106 0.061929274481356524 59.12015748796074 0.4174348734311841 0.3747286682317003 7.431345531521765 0.009999999993702473 2.000000000273498 0.8801083733203324 AQTLPTSVVTITSES(ph)SPGKR ddPTM_A549_MK2206_60min_R1 1 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVTIT(0.002)S(0.045)ES(0.496)S(0.457)PGKR 126.27 1.2315e-15 4278600.0 2242.9 2384.7 2479.2 2711.8 3121.7 2737.7 2300.3 2126.7 3552.7 3347.0 3381.3 True False 2621.4466863597936 2506.0710441227575 2830.7878394510076 3376.1911217373267 2662.502065290984 3027.401596861816 2718.234734434515 2428.166237745596 2748.0191224961163 2590.9103754075472 2541.6298908674667 1.0314037837606187 0.9860094316357867 1.1137687078762086 1.3283567107345522 1.0475569534564544 1.191126059596566 1.0694848782671391 0.9553579167723963 1.0812034955877106 1.0193893236450964 1.0 11.311538246757467 -7.995382232687188 24.680819315263527 1.0322042714126922 1.1179569927210942 0.21131117353455586 0.08995185681140398 159.9419615610316 854841.3250932583 0.014430931886279558 0.01989623790429435 1.0106895313033778e-08 7.995382232687188 0.08575272130840195 AQTLPTSVVTITSES(ph)SPGKR ddPTM_A549_PD325901_60min_R1 1 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVTIT(0.006)S(0.195)ES(0.518)S(0.281)PGKR 98.01899999999999 3.676e-07 3907700.0 3294.8 3573.2 3761.4 3533.2 4232.5 3949.7 4097.8 4504.5 3368.5 3296.6 3740.7 True False 3629.2856704964347 3874.326104146491 4016.671223135659 3751.437739520599 3935.223801332324 3917.534952718859 4253.744021402198 4414.654213788113 3226.933659274291 3088.4521133987223 3280.617614251029 1.1062812242215578 1.1809746089627722 1.2243643409360505 1.1435156975394887 1.1995374847216818 1.194145558354944 1.2966290258650994 1.3456777756148173 0.9836360218443215 0.9414239867464168 1.0 11.679751729120877 -8.784480477674895 24.998822604641532 0.992272520076894 1.2104181268412837 0.7279841536924523 0.06411100640992679 88.64436771559188 96175.74039971328 0.011146899431224707 0.011870512282521523 1.6425534937755347e-09 8.784480477674895 0.21814560676438965 AQTLPTSVVTITSESS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 AQTLPTSVVTITSESSPGK 19 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVT(0.028)IT(0.033)S(0.024)ES(0.386)S(0.528)PGK 59.606 0.0034063 3767100.0 678.6 958.69 558.85 788.92 1332.3 1001.6 939.73 1312.4 1363.8 1194.0 907.19 True False 793.1310898228883 1007.4832261039323 638.1033333644714 982.2054354159641 1136.3204348871386 1107.5886471917295 1110.4667769378539 1498.4367190564353 1054.9014775410815 924.2745707309863 681.9096858297277 1.1631028364963458 1.4774437833040257 0.9357593045302561 1.4403746651887563 1.666379666545574 1.6242453659300178 1.6284660564494997 2.1974122822924587 1.54698121974541 1.3554207982928943 1.0 9.413436866804851 AQTLPTSVVTITSESS(ph)PGKR ddPTM_A549_MK2206_60min_R1 3 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVTITS(0.009)ES(0.189)S(0.802)PGKR;AQTLPTSVVTITSES(0.204)S(0.796)PGKR;AQTLPTSVVTIT(0.002)S(0.064)ES(0.221)S(0.713)PGKR 195.36 4.8424e-55 1709488600.0 11077.1 11478.800000000001 11206.2 9603.8 16011.400000000001 11965.5 10716.1 10763.2 17503.2 16671.399999999998 17128.1 True False 12946.643670906446 12063.02189008107 12795.407666366531 11956.73143113097 13656.14427017333 13231.681267943924 12663.076658554839 12288.916560917574 13538.753146866888 12905.319161209847 12874.72005848847 1.0055864214593586 0.936954111256793 0.9938396802601042 0.9286983621245994 1.0606944623366514 1.0277257453236899 0.9835613202483504 0.9544997099036209 1.0515765069346585 1.0023766810138293 1.0 13.65225344294269 -6.758442138517671 24.99989664091385 1.0187232226742546 0.9661449709529608 0.2641865961116352 0.03500356473941131 73.28550466163614 611261.1221676042 0.005202136064896031 0.010468339457650081 1.744045702917485e-07 6.758442138517671 -0.05257825172129382 AQTLPTSVVTITSESS(ph)PGKR ddPTM_A549_PD325901_60min_R1 2 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVTIT(0.002)S(0.011)ES(0.166)S(0.82)PGKR;AQTLPTSVVTITSES(0.199)S(0.801)PGKR 234.21 1.0296999999999998e-76 2813200000.0 17109.7 16939.0 17843.9 16942.1 22009.0 18980.699999999997 17082.6 18848.7 19793.1 18407.7 20153.3 True False 18846.664148504588 18366.508977425674 19054.894358087513 17988.57503869919 20463.1637669281 18826.127472231034 17732.687690957388 18472.747891980907 18961.26483935934 17245.434680522274 17674.571862294568 1.0663151727431917 1.0391487341544734 1.0780965166538268 1.017765815141157 1.1577742265193127 1.0651532392924943 1.0032881038995236 1.0451595679886934 1.072799102976276 0.9757200805136458 1.0 14.109387648070662 -11.024613207221577 0.6551555623541538 0.9863757728062756 1.0619144888935823 0.3380068933032564 0.03857413797951274 1.4124141829113317 0.7493588476922262 0.06548538718561317 0.007452970787122842 9.449020534158046e-12 11.024613207221577 0.07553871608730667 AQTLPTSVVTITSESSPGKR ddPTM_A549_MK2206_60min_R1 1 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 86.74799999999999 4.2676e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AQTPPGPSLSGSKS(ph)PCPQEK ddPTM_A549_MK2206_60min_R1 2 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQTPPGPS(0.001)LS(0.002)GS(0.022)KS(0.975)PCPQEK;AQTPPGPS(0.001)LS(0.002)GS(0.015)KS(0.982)PCPQEK 142.4 2.1981999999999996e-21 299610000.0 4857.5 5570.1 5235.5 4641.0 6436.1 4843.299999999999 4805.7 4868.9 6677.299999999999 6724.1 6920.0 True False 5677.327245527085 5853.5942981793 5977.972625623489 5778.045208342405 5489.358215850118 5355.8147912776585 5678.833484011627 5559.08148538089 5164.902211457009 5205.121139909731 5201.5730177159285 1.0914635296266717 1.1253507887407648 1.1492624645012648 1.1108265112617053 1.055326570857321 1.029652909424976 1.0917531032766832 1.0687308370847302 0.9929500545058152 1.000682124846026 1.0 12.344732262084833 -7.7306740625384025 0.5108872755234666 0.9927535295130474 1.1278305815177139 0.6940805029337627 0.02848149617474617 0.3544437271552578 0.19036241603879112 0.008521116272309955 0.01846576437106149 1.8591992583285783e-08 7.7306740625384025 0.13507705200466646 AQTPPGPSLSGSKS(ph)PCPQEK ddPTM_A549_PD325901_60min_R1 2 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQTPPGPSLSGS(0.027)KS(0.973)PCPQEK;AQTPPGPS(0.001)LS(0.003)GS(0.008)KS(0.988)PCPQEK 180.88 7.9914e-39 440630000.0 12655.8 12295.0 15059.2 12386.2 13381.400000000001 12542.099999999999 14481.7 15088.1 10351.2 13911.0 15221.5 True False 13940.607499292466 13331.142799306257 16081.207870326072 13151.26744289881 12441.536627323898 12439.961295920006 15032.809018190303 14787.156009114531 9916.175061267635 13032.65708593388 13349.351997038535 1.0442909515297145 0.9986359489407188 1.2046433320429022 0.9851614854276322 0.9319955478051646 0.9318775397247543 1.126107770738627 1.1077059030576888 0.7428207049651153 0.976276383215087 1.0 13.704482091997948 -8.745981357551972 24.99999763417862 0.8785542081782292 1.038989236193828 0.25363039256482856 0.0999771573627676 231.48507904312015 374376.7368564114 0.02018784303072863 0.02285044060118114 1.794810668903925e-09 8.745981357551972 0.16043502801559884 AQTSYGFAMLAES(ph)PHTR ddPTM_A549_PD325901_60min_R1 1 AQTSYGFAMLAESPHTR 17 0 Q8TF44 Q8TF44 C2CD4C C2 calcium-dependent domain-containing protein 4C 1 AQTSYGFAMLAES(0.766)PHT(0.234)R 44.341 0.016162 1123000.0 790.43 1129.1 1027.6 1023.7 1006.5 1342.6 1033.5 1135.3 899.13 958.4 1102.0 True False 870.6738717161884 1224.253219576795 1097.339115460787 1086.931624008615 935.8069122364994 1331.6663107376116 1072.8304080529 1112.6555508743795 861.3426929088008 897.8864604384331 966.4609861535633 0.9008887934332457 1.2667383754922419 1.1354199819571695 1.1246513202095358 0.9682821403489191 1.3778790140691928 1.1100607509493772 1.151267942333253 0.8912337955170598 0.9290457383199178 1.0 9.916567685047433 -8.753439169731664 24.9763735210386 0.9486381800288646 1.1362865699770794 0.3180211973987285 0.12298844651880937 143.2504281814113 447222.5038754192 0.019788943167575228 0.022244404586131923 1.7642528605454556e-09 8.753439169731664 0.18764838994821487 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(ph)SPER ddPTM_A549_MK2206_60min_R1 2 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.548)S(0.452)PER;AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.5)S(0.5)PER 114.71 2.4851e-21 36504200.0 2003.88 2846.15 2794.3399999999997 2485.48 2367.17 2077.02 1998.8400000000001 1978.33 3304.96 3913.1 4351.5 True False 2342.085953837739 2991.006878110448 3190.619430175675 3094.422711577437 2018.9624287711385 2296.808877785709 2362.0033545959586 2258.7643358815294 2556.391836936628 3029.127992234019 3270.9024547096615 0.7160366248358917 0.9144286384339584 0.9754553901727061 0.9460455499435279 0.6172493544905636 0.7021942444289684 0.7221258925636838 0.6905630379252709 0.7815555102402293 0.926083255057784 1.0 11.675473020479899 -10.536961517576168 0.9329502831892507 0.9949662297615371 0.7888882767790362 0.26705284242304606 0.11137303318728561 0.5451346471407708 0.8782341450516689 0.07088331448758678 0.021981801586649172 2.9042799885697858e-11 10.536961517576168 -0.20607795298250098 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(ph)SPER ddPTM_A549_PD325901_60min_R1 2 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.595)S(0.405)PER;AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.707)S(0.293)PER 176.73 8.988099999999998e-63 123165000.0 4869.8 7313.4 5575.799999999999 7056.2 7515.0 7211.2 5296.7 6020.6 7224.4 7440.9 7635.4 True False 5364.178511042719 7929.725884379529 5954.207318009197 7492.045448207084 6987.172325342572 7152.474378065739 5498.268816965453 5900.514409930669 6920.78359152774 6971.080304128064 6696.294204788488 0.8010667313880595 1.1841961601252555 0.8891794679139652 1.1188345701491964 1.0434386709511774 1.0681242728180966 0.8210912855402421 0.8811611660836586 1.0335244211012593 1.0410355475634685 1.0 12.709147199417886 AQVLATIHGHAGAFPAAGDAGEGAPGGGSS(ph)PER ddPTM_A549_MK2206_60min_R1 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.334)S(0.666)PER 119.24 6.172e-21 22168000.0 2094.8 2829.4 2775.7 2245.7 3081.5 2153.8 2071.1 1930.5 3428.0 3978.5 3591.9 True False 2448.3510270571583 2973.404374655485 3169.3359978880967 2795.8966008133025 2628.2154320383675 2381.7136864232684 2447.3920612473685 2204.154286908296 2651.5634733911347 3079.75408681175 2699.932098603156 0.9068194819876557 1.1012885754400317 1.1738576683198043 1.035543302092595 0.9734376036338498 0.8821383647594241 0.9064643005331717 0.8163739703115656 0.9820852438337077 1.140678348320352 1.0 11.398707409626967 -6.691256323391196 4.011258312459442 0.9616985319979061 1.0698226451903678 0.18808939898433452 0.09682123586971988 0.24558759795421753 7.756018920537126 0.012373731832955186 0.026311371288357227 2.0358401571200698e-07 6.691256323391196 0.10812411319246173 AQVLATIHGHAGAFPAAGDAGEGAPGGGSS(ph)PER ddPTM_A549_PD325901_60min_R1 2 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.196)S(0.804)PER;AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.478)S(0.522)PER 181.45 2.3754999999999998e-76 17913200.0 1344.16 1364.26 1500.9 1447.4499999999998 2133.5 1907.12 1483.2199999999998 2190.5 1756.83 1585.3400000000001 2290.5 True False 1480.6181336817076 1479.230978070886 1602.7600996448948 1536.8556991025405 1983.6503201754315 1891.58904702362 1539.6647487491268 2146.8087590859946 1682.9965446408942 1485.2413618441826 2008.7830206758042 0.7370722066256769 0.7363816613569525 0.7978761683806381 0.7650680453210443 0.9874885937198347 0.9416592173241501 0.7664664291273956 1.0687111235954967 0.8378189816014537 0.7393737136151772 1.0 10.972106023994282 -2.703552932936864 0.2117815113421673 0.9597078947960325 1.44196517315508e-16 0.19727604393349762 0.10550109942322188 26.60742020951563 0.39447552415495213 0.06297356250892044 8.209439373909493 0.0019790058001823286 2.703552932936864 -0.9597078947960324 AQVPGPLT(ph)PEMEAR ddPTM_A549_MK2206_60min_R1 2 AQVPGPLTPEMEAR 14 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 AQVPGPLT(1)PEMEAR;AQVPGPLT(1)PEMEAR 138.21 2.3794000000000003e-09 8683300.0 2166.3 2482.0 2323.1099999999997 2191.9 3197.6000000000004 2345.5 2311.0 2440.2 3460.2 3453.7 4159.5 True False 2531.91847904999 2608.3231985208563 2652.5619303432704 2728.9155983981286 2727.2372758351084 2593.6992531831074 2730.878785931471 2786.105822799082 2676.4702248039684 2673.5067713011777 3126.5813536400856 0.8098041255514536 0.8342412697766993 0.848390503978109 0.8728113200128379 0.8722745284270165 0.8295639741353359 0.873439222284134 0.8911029356569887 0.8560372886788695 0.8550894631891087 1.0 11.61037034132138 -14.999999999999995 0.21065774358133482 1.740958057879613 0.8321568981957704 0.0 0.04872713259141505 10.407838251980566 0.12557302410536952 3.175556381396228 0.015394387605772445 1.0000000000000123e-15 14.999999999999995 -0.9088011596838427 AQVPGPLT(ph)PEMEAR ddPTM_A549_PD325901_60min_R1 2 AQVPGPLTPEMEAR 14 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 AQVPGPLT(1)PEMEAR;AQVPGPLT(1)PEMEAR 138.19 2.4083e-09 9342700.0 5890.9 7100.9 5856.1 6063.1 6312.299999999999 5401.799999999999 5954.1 6042.200000000001 7110.3 7152.200000000001 8073.9 True False 6488.939831348625 7699.317763610722 6253.530161590031 6437.603916700828 5868.945824252813 5357.809531761084 6180.686533708535 5921.6835809858 6811.478817734302 6700.608871397915 7080.861484669015 0.916405418379956 1.0873419541224956 0.8831595103406182 0.9091554651420702 0.828846297439915 0.7566606892906235 0.8728721140909935 0.8362942268828467 0.9619562298291017 0.9462985380953438 1.0 12.789709179440868 -8.92019752855532 5.702324830115191 0.9835691407251942 0.887096223070025 0.1828802652139474 0.07767835004725494 0.2346313213938046 12.427249296246993 0.014584871894020695 0.015380326159734455 1.201717737460222e-09 8.92019752855532 -0.09647291765516919 AQYDELAR ddPTM_A549_MK2206_60min_R1 2 AQYDELAR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 180.87 3.1661e-08 151110000.0 14938.8 16444.0 13977.8 13136.7 18478.1 14065.7 14659.4 14230.3 21442.4 20937.1 20793.1 False True 17460.104221406084 17280.929361997172 15960.062222603383 16355.192089728867 15759.995967791061 15554.123037944002 17322.823225652868 16247.488603466005 16585.73063647669 16207.394568552529 15629.599409634264 1.1171178328885047 1.1056540164007664 1.021143396213048 1.0464242659762182 1.0083429238804686 0.9951709337064815 1.1083344346608706 1.0395332713038612 1.0611743910885556 1.0369680081859363 1.0 13.931993181742417 -2.000012830480714 0.00699606657691232 1.243072683994301e-07 2.202137596892243 0.18991096972233923 0.03788285775913757 23169.51920556537 12.194020727005011 1724.689168892555 2134.238448005052 0.009999704571627705 2.000012830480714 2.2021374725849747 AQYDELAR ddPTM_A549_PD325901_60min_R1 2 AQYDELAR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 194.29 1.4438999999999999e-11 222612000.0 17059.9 16651.1 16843.1 17676.699999999997 19686.2 18527.0 17634.5 19155.3 19756.1 20127.3 20726.3 False True 18791.808489165396 18054.34663404054 17986.17405178821 18768.54961230154 18303.509225703106 18376.122254607275 18305.590547468673 18773.232514457846 18925.819820688375 18856.458843053482 18177.096494840822 1.0338179419633409 0.993247003951642 0.9894965379588098 1.0325383714405978 1.0069545062325087 1.0109492602310244 1.0070690086650704 1.0327959979629433 1.0411904797919769 1.0373746350747206 1.0 14.14983414965189 -8.221163750978526 24.28427662664166 1.0209954218194122 1.0098232128348827 0.15657199064846283 0.016659514268644413 846.37929054435 510324.1005921578 0.003107831692931249 0.004012086753865205 6.009471073158305e-09 8.221163750978526 -0.01117220898452942 ARAS(ph)PSVTCK ddPTM_A549_PD325901_60min_R1 2 ARASPSVTCK 10 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 ARAS(0.922)PS(0.068)VT(0.01)CK;ARAS(0.982)PS(0.018)VTCK 58.595 0.0030340999999999996 19573100.0 8548.8 8956.400000000001 9002.5 9809.0 9439.3 9345.599999999999 8278.099999999999 9407.099999999999 9077.4 9895.0 10152.0 True False 9416.66788270606 9711.18726048854 9613.463786430259 10414.879652144671 8776.316131817177 9269.492532123799 8593.127625450132 9219.468010772816 8695.908445508821 9270.228011308738 8903.368358830283 1.0576522843027933 1.0907318296964619 1.0797558181332247 1.1697684777711443 0.9857298696524112 1.0411219842353705 0.9651546784456629 1.0355033779579645 0.9766987161532293 1.0412045910820489 1.0 13.12013553031738 -6.786517060807552 24.999997299113183 0.9943247284801436 1.0974437881491947 0.5906857936433133 0.036335789307952 89.16574335696366 88889.32623624108 0.004551700882833759 0.008604356204029837 1.63486892574097e-07 6.786517060807552 0.1031190596690511 ARDSGREDEPGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ARDSGREDEPGSPR 14 2 Q2TAM9 Q2TAM9 TUSC1 Tumor suppressor candidate gene 1 protein 1 ARDSGREDEPGS(1)PR;ARDS(0.002)GREDEPGS(0.998)PR 67.605 0.0012055 5929800.0 198.08 688.02 460.35 251.35999999999999 422.48 264.48 330.75 301.75 561.56 675.75 512.46 True False 231.51106140895635 723.0372792289766 525.6345522310711 312.9432112839793 360.333751655872 292.46709805238464 390.84299370265427 344.5239865706185 434.3675566270493 523.0976056712423 385.20203882351217 0.6010120354399985 1.8770338844448593 1.364568458247182 0.8124131747582995 0.9354409253814099 0.7592563604949769 1.0146441459561604 0.8943981387608099 1.127635663491551 1.357982442847115 1.0 8.589471528970599 -6.241790450419099 23.808454368129222 1.0026721384420072 1.3404878022991107 0.13848328352550943 0.3146413274245421 510.3767972407847 618417.016915156 0.037523069791283586 0.09908849966317235 5.730724750468909e-07 6.241790450419099 0.3378156638571035 ARDSGREDEPGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ARDSGREDEPGSPR 14 2 Q2TAM9 Q2TAM9 TUSC1 Tumor suppressor candidate gene 1 protein 1 ARDS(0.004)GREDEPGS(0.996)PR;ARDS(0.004)GREDEPGS(0.996)PR 44.733999999999995 0.017808 9551200.0 368.40999999999997 162.83 221.38 445.48 545.44 483.9 343.37 635.24 322.58 550.38 642.0 True False 405.8107119908922 176.55225555193473 236.4041780660849 472.99628784151406 507.1301760658485 479.9592788365338 356.4371332492738 622.5696398638602 309.0230844021675 515.6289128715616 563.0380699733097 0.7207518170310033 0.31357072455207874 0.41987245742955076 0.8400786963907005 0.9007031728598539 0.8524455173329325 0.6330604487653391 1.1057327613626065 0.5488493600740292 0.9157975994340926 1.0 9.137088663598577 -6.263250961794438 24.931425108706016 0.8101302207913041 0.4676155597908561 0.4525632770886485 0.17456349017486922 124.61143605183446 1714948.5998796613 0.02773055985504611 0.06765920196105271 5.454425800727491e-07 6.263250961794438 -0.34251466100044803 ARDT(ph)KVLIEDTDDEANT ddPTM_A549_MK2206_60min_R1 1 ARDTKVLIEDTDDEANT 17 2 Q9UBH6-2;Q9UBH6 Q9UBH6-2 XPR1 Xenotropic and polytropic retrovirus receptor 1 1 ARDT(0.997)KVLIEDT(0.003)DDEANT 53.778999999999996 0.025727999999999997 2351800.0 1120.5 1112.3 827.74 747.33 1138.4 884.54 993.62 952.1 1209.2 1227.6 1338.7 True False 1309.6130064051677 1168.9113189825746 945.1259786330984 930.425883548918 970.9428680293616 978.1414356898676 1174.1478923743946 1087.0630906839629 935.318130695613 950.2843073947719 1006.263843759583 1.3014608589256447 1.1616350187196545 0.9392427090512737 0.9246341198871653 0.9648988921252941 0.972052649765647 1.1668389952157743 1.0802962835497492 0.9294959135181644 0.9443689279785096 1.0 9.974792916024409 -5.558861458595019 3.3863041371000477 0.9832140814334579 1.285198291853651 0.650141801962804 0.07072445520312605 0.10961287065772707 2.4749155562436798 0.01053306140135236 0.05892563660806879 2.7614586303478047e-06 5.558861458595019 0.3019842104201932 AREES(ph)WGPPR ddPTM_A549_MK2206_60min_R1 3 AREESWGPPR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 AREES(1)WGPPR;AREES(1)WGPPR;AREES(1)WGPPR 107.39 7.4639e-05 70500000.0 4230.21 4333.01 3064.74 2746.71 6665.83 5114.29 3847.68 4233.030000000001 6270.1 6547.4 7523.1 True False 4944.166029295139 4553.5417012179105 3499.3662161500006 3419.654073304497 5685.295237171608 5655.480773209055 4546.753650823368 4833.074965610687 4849.932361292229 5068.337792633213 5654.906643002704 0.8743143506025826 0.805237290142074 0.6188194495624545 0.6047233472078491 1.0053738454208623 1.0001015277956995 0.8040369077444368 0.8546692758564036 0.8576502968963178 0.8962725846066261 1.0 12.465287491584736 -14.999999992583069 0.07262223130331831 1.6448934800741566 0.5985313835751144 0.1719373110095369 0.1194782792216122 188.78993425436602 1.022775208397222 20.15362175266616 2.5291084896539737 1.000000017078115e-15 14.999999992583069 -1.0463620964990423 AREES(ph)WGPPR ddPTM_A549_PD325901_60min_R1 3 AREESWGPPR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 AREES(1)WGPPR;AREES(1)WGPPR;AREES(1)WGPPR 122.46 1.0087e-05 90313000.0 9050.5 8539.9 8089.8 8625.0 8453.099999999999 8407.3 7472.3 6737.5 10153.3 9322.1 12474.5 True False 9969.300097374042 9259.587343781654 8638.822475919304 9157.74666120377 7859.38341761188 8338.833736231432 7756.662465499452 6603.115277033503 9726.592110051855 8733.501015080465 10940.215582370794 0.9112526185899573 0.8463807019216946 0.7896391447568926 0.8370718650152271 0.7183938340553904 0.7622184109121888 0.7090045353401114 0.6035635429043874 0.8890676821511098 0.7982933196630734 1.0 13.417353546980909 -9.075458554797617 3.2913383316894773 0.9567424791104094 0.7723239753286738 0.19657001309239663 0.09303990260685263 0.14117366317162255 3.188738234259138 0.016259488722683076 0.016054904036652284 8.405072138050994e-10 9.075458554797617 -0.18441850378173563 AREET(ph)DKEEPASK ddPTM_A549_MK2206_60min_R1 1 AREETDKEEPASK 13 2 P05455 P05455 SSB Lupus La protein 1 AREET(0.998)DKEEPAS(0.002)K 48.547 0.060303999999999996 5385800.0 1526.1 1414.1 1513.0 1396.6 1076.0 620.23 586.6 445.84 936.77 2348.6 2137.1 True False 1783.6683704372392 1486.071649890549 1727.5661508104947 1738.7670626957556 917.7218253685804 685.862326924647 693.1776269266121 509.0391853277363 724.5930907142975 1818.0496288264592 1606.3990890405641 1.110351955878256 0.9250949281713787 1.0754277455686923 1.0824004287342128 0.5712913009161987 0.4269563719276536 0.43151022162283376 0.3168821426758679 0.45106667182379134 1.1317546438054227 1.0 10.649614640937767 -6.7585717213222445 24.998847596713695 0.6448936253638753 1.04145347709032 0.42559639256646764 0.2389100908037189 69.29609708281066 604077.8709627655 0.03879278695381481 0.07803705309922439 1.7435254001503939e-07 6.7585717213222445 0.3965598517264448 AREET(ph)DKEEPASK ddPTM_A549_PD325901_60min_R1 2 AREETDKEEPASK 13 2 P05455 P05455 SSB Lupus La protein 1 AREET(1)DKEEPASK;AREET(1)DKEEPASK 116.82 3.0383e-05 30589000.0 5787.9 6408.4 6358.7 6307.1 6529.5 7025.4 6692.3 6199.3 6807.8 7731.200000000001 8125.3 True False 6375.483347173221 6948.458358281754 6790.239619969348 6696.675242536623 6070.890445552135 6968.187471663942 6946.979138667076 6075.650098243232 6521.691840762213 7243.050712585155 7125.939610520464 0.8946866933534915 0.9750936350938642 0.9528904244353261 0.9397603135241153 0.8519424493282689 0.9778622683493384 0.9748860526983448 0.8526103826747808 0.9152044778956361 1.0164344786043082 1.0 12.79886454192339 -10.716295645491456 1.023454179764939 0.9991342648608321 0.9272612913879523 0.33720100236310135 0.04359251355753511 0.5437812091117138 1.0314100673679234 0.027359185877738133 0.007471837616322667 1.9217830318259282e-11 10.716295645491456 -0.0718729734728798 AREGS(ph)FESR ddPTM_A549_MK2206_60min_R1 2 AREGSFESR 9 1 P19174-2;V9GY71;V9GYH5;P19174 P19174-2 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 AREGS(1)FESR;AREGS(1)FESR 69.721 0.0032240000000000003 17497600.0 1304.58 1397.98 1393.9299999999998 1200.6799999999998 1954.62 1199.6 1213.93 1263.5700000000002 1634.87 1890.9899999999998 2036.69 True False 1524.7612100812603 1469.1312107446363 1591.6102343683228 1494.8466539005738 1667.0979872694563 1326.5408757699668 1434.4853676355644 1442.684917020833 1264.5745553509223 1463.814045650408 1530.9236632155853 0.9959746829431186 0.9596371432778309 1.0396404945660518 0.9764344818870755 1.0889491274619452 0.86649707470304 0.9370064635505994 0.9423624127610558 0.8260206473618563 0.9561639687349147 1.0 10.580186631872092 -7.273289227693997 24.984469317956336 0.9163612169461495 1.0087566643166919 0.41547127651304117 0.053372894218279135 724.4912361978469 1527530.2746242539 0.010304306333235626 0.016546569954587684 5.32979827958571e-08 7.273289227693997 0.0923954473705424 AREGS(ph)FESR ddPTM_A549_PD325901_60min_R1 4 AREGSFESR 9 1 P19174-2;V9GY71;V9GYH5;P19174 P19174-2 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 AREGS(1)FESR;AREGS(0.941)FES(0.059)R;AREGS(1)FESR;AREGS(1)FESR 108.9 0.00035308 70687000.0 6711.99 6466.36 6044.71 7225.15 6658.8099999999995 6869.22 6758.7 7102.46 7536.959999999999 8591.3 7879.02 True False 7393.386283694117 7011.302850892397 6454.940370394096 7671.431105993787 6191.118157247421 6813.279349802633 7015.906027002549 6960.7958635279165 7220.207781684418 8048.8438517995655 6909.950489222913 1.0699622660430337 1.014667595929603 0.9341514646829275 1.1102005894193476 0.8959714207653705 0.9860098651110376 1.015333762223751 1.0073582834470818 1.0449000746018942 1.1648193231417394 1.0 12.754459658197694 -7.933003781906419 6.70619424891377 1.0203328980943782 0.999441618818437 0.035438032581604606 0.07050767118618838 0.7188277689983894 57.604217236188035 0.008285753314059405 0.011469751040978528 1.1667994563388007e-08 7.933003781906419 -0.020891279275941255 ARENPS(ph)EEAQNLVEFTDEEGYGR ddPTM_A549_PD325901_60min_R1 2 ARENPSEEAQNLVEFTDEEGYGR 23 1 Q12874 Q12874 SF3A3 Splicing factor 3A subunit 3 1 ARENPS(1)EEAQNLVEFTDEEGYGR;ARENPS(1)EEAQNLVEFTDEEGYGR 45.07 0.0087835 1800300.0 407.12 644.12 324.22 226.57 837.92 614.88 499.18 404.92 486.62 685.1 724.4000000000001 True False 448.4505226940967 698.4022529393362 346.22351889324284 240.56471432219593 779.0673898670716 609.872621142814 518.176568061777 396.8435529464051 466.16905366663394 641.8426690801027 635.3033923499469 0.7058840360277422 1.0993208305656776 0.5449735088184938 0.3786611518511846 1.2262918776261382 0.9599706667501552 0.8156363940464331 0.6246520288180833 0.7337739090961001 1.0102931556936403 1.0 9.311301912539081 -10.81822241517983 1.0915090921747936 0.998750704172687 0.7887285304127113 0.1157947673349351 0.2302923735884463 0.9850883901650561 2.103504208760872 0.15491040698431488 0.03936823846135078 1.5197690112806056e-11 10.81822241517983 -0.21002217375997567 AREQAEAEVAS(ph)LNRR ddPTM_A549_PD325901_60min_R1 2 AREQAEAEVASLNRR 15 2 P06753-2;P06753-3;P06753-6;A0A087WWU8;P06753-5;P06753-4;D6R904;A0A494C0G0 P06753-2 TPM3 Tropomyosin alpha-3 chain 1 AREQAEAEVAS(1)LNRR;AREQAEAEVAS(1)LNRR 77.468 0.0001149 7392700.0 538.55 332.19 323.28 591.65 466.92 557.62 405.13 471.14 354.804 560.0699999999999 687.99 True False 593.2231995404442 360.18481712090636 345.21972484056363 628.1948767653579 434.12514998655365 553.0789275983219 420.5474438456426 461.74274309782004 339.8928217441459 524.7070846178558 603.3715915279399 0.9831805273400482 0.5969535559484946 0.5721511083515733 1.0411409578872566 0.7194988230838026 0.9166472789972427 0.6969957647171868 0.7652709368177776 0.5633225470284786 0.8696251066264503 1.0 9.236902961621313 -11.09899176817711 1.4538430349681912 0.9991644483480213 0.7351509543791113 0.11737775887093305 0.15951038705955425 0.4409136566850962 1.674421510443428 0.11125232070620088 0.02460747277815259 7.96174441340992e-12 11.09899176817711 -0.26401349396891005 ARFEELNADLFR ddPTM_A549_MK2206_60min_R1 2 ARFEELNADLFR 12 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 113.24 3.7659e-05 14877800.0 606.11 702.4100000000001 836.73 739.6600000000001 1314.88 829.61 813.14 530.1700000000001 1070.28 992.58 1220.9099999999999 False True 708.4065500332314 738.1596687643174 955.3908958147152 920.8767332045994 1121.462893811004 917.3987795494517 960.8770125453545 605.3232210775298 827.863288885958 768.3554886232511 917.7243515982017 0.7719164788419891 0.8043370184945235 1.041043418049132 1.0034349983204738 1.2220040711113256 0.999645239828078 1.0470213750697617 0.6595915429544497 0.9020827304454195 0.8372399482319204 1.0 9.841917079470944 -5.676734928126742 6.722004905494232 0.96801166893393 0.7823592495811693 0.21307116932314496 0.13357626653410537 0.24232594352633893 15.686313364367052 0.018010554254859933 0.07095382718716926 2.1050628740192045e-06 5.676734928126742 -0.18565241935276067 ARFEELNADLFR ddPTM_A549_PD325901_60min_R1 2 ARFEELNADLFR 12 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 151.66 2.1727e-12 57386000.0 1811.77 1996.4699999999998 2239.79 2305.2 2149.96 3187.2 2461.87 2562.55 2210.94 2480.45 2772.7 False True 1995.6995566454186 2164.719533512074 2391.7956183514175 2447.5869685109506 1998.9542265593484 3161.2444999127906 2555.557810036954 2511.437929968415 2118.021880550957 2323.8339636837536 2431.6754775934514 0.8207096609044626 0.8902172816474776 0.9835998431495054 1.0065434269762206 0.8220481083839555 1.300027297656252 1.0509452571220994 1.0328014379837813 0.8710133815418055 0.9556513544247998 1.0 11.247734989551136 -5.546347925014923 2.823597903288244 0.9746949182118976 0.8239517242925412 0.1679262448187263 0.11733760335806515 0.4487185908140405 6.576938135219377 0.016984376134234088 0.11439091973472965 2.842183245538542e-06 5.546347925014923 -0.15074319391935642 ARGDS(ph)EALDEES ddPTM_A549_MK2206_60min_R1 2 ARGDSEALDEES 12 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 ARGDS(1)EALDEES;ARGDS(1)EALDEES 175.88 4.6607e-16 629780000.0 1371.01 1851.5099999999998 1750.76 1706.84 2564.8 1575.69 1813.4 2215.35 3250.2 3100.3 3274.7999999999997 True False 1602.4029700236943 1945.743950561383 1999.044093980821 2125.0158766229583 2187.521317570015 1742.4284699416294 2142.871306970199 2529.3826467248346 2514.034889502877 2399.940076748137 2461.576780117935 0.6509660730334491 0.7904461751008887 0.8120990212968477 0.8632742613541992 0.8886667014567834 0.7078505468588914 0.8705279170156672 1.0275457045071943 1.0213107751944381 0.974960479044312 1.0 11.265367024668679 -8.111350534466057 3.802741631255359 1.0114704448626288 0.7946343588252729 0.7211367978206062 0.06365779318796556 0.09227789133514888 2.3935544972443403 0.01002292157271945 0.013176947319353026 7.738369544421195e-09 8.111350534466057 -0.21683608603735594 ARGDS(ph)EALDEES ddPTM_A549_PD325901_60min_R1 3 ARGDSEALDEES 12 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 ARGDS(0.997)EALDEES(0.003);ARGDS(1)EALDEES;ARGDS(1)EALDEES 157.33 6.7136e-14 865716000.0 2068.52 2351.62 2557.46 3090.61 2605.75 2892.66 2737.71 2728.52 3158.67 2469.38 2762.6800000000003 True False 2278.5146276360597 2549.7992704111084 2731.024614856308 3281.5099604154207 2422.7311093494877 2869.1031360183674 2841.8950521823963 2674.097528117468 3025.9220844708098 2313.462925372973 2422.8878740714404 0.9404127413487052 1.052380218539129 1.1271774662304417 1.3543796209195371 0.9999352984000497 1.1841666990545061 1.1729370899062088 1.1036819147655779 1.2488906799413817 0.9548369737330896 1.0 11.242511926238775 -5.453923752682913 2.6312848200076098 1.135104246674923 0.9360292593769902 0.19939321303740842 0.11081370295581222 0.4059225368359626 4.596663016176567 0.015509180962398152 0.14434665023115348 3.516221679844572e-06 5.453923752682913 -0.19907498729793283 ARGDSEALDEES(ph) ddPTM_A549_PD325901_60min_R1 1 ARGDSEALDEES 12 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 ARGDSEALDEES(1) 59.426 0.0034452 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ARGGS(ph)PAPLPAKVDEATSGLIR ddPTM_A549_PD325901_60min_R1 2 ARGGSPAPLPAKVDEATSGLIR 22 2 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 ARGGS(1)PAPLPAKVDEATSGLIR;ARGGS(1)PAPLPAKVDEATSGLIR 71.97399999999999 7.3589e-05 9047800.0 1024.1999999999998 958.84 1382.79 1289.62 1337.68 1623.59 1414.94 1579.98 1029.79 1574.25 1520.24 True False 1128.1760300238104 1039.6448118492733 1476.6344447917686 1369.2768984604768 1243.7259715454757 1610.3680213395482 1468.7863159848773 1548.4660594296672 986.5115074911893 1474.8515863368143 1333.2601175953648 0.8461784877046806 0.7797764278169148 1.1075366504287176 1.0270140690400842 0.9328457028990181 1.20784234080591 1.1016502305896199 1.161413319872226 0.73992426119401 1.1061994331584901 1.0 10.380742560779206 -8.762041452821205 24.999999980856373 0.8771864651725468 1.0216478947299792 0.0 0.15122441054300595 22.74031733649584 944241.4759168784 0.026750738791546325 0.029322743354438446 1.7296512584614827e-09 8.762041452821205 0.14446142955743235 ARGPEEEEIGSPEPMAAPASASQKLS(ph)PLQK ddPTM_A549_MK2206_60min_R1 2 ARGPEEEEIGSPEPMAAPASASQKLSPLQK 30 2 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 ARGPEEEEIGSPEPMAAPAS(0.002)AS(0.042)QKLS(0.956)PLQK;ARGPEEEEIGSPEPMAAPAS(0.017)AS(0.263)QKLS(0.72)PLQK 130.64 4.4e-28 16538000.0 3367.8999999999996 3479.9 4016.8 3355.1000000000004 4623.8 3955.9 3911.0 3021.8 5130.799999999999 5188.0 5319.7 True False 3936.3191827505257 3657.0120461453384 4586.442640168933 4177.09965061616 3943.645145110822 4374.510712286105 4621.578075196012 3450.149403874382 3968.6819922039745 4016.027196777516 3998.671673749048 0.984406699002606 0.9145567189607797 1.1469915547901954 1.044621812297938 0.9862387979989778 1.0939909723032302 1.1557783314734975 0.8628238788706586 0.9925000890315768 1.0043403220980622 1.0 11.965305112671858 -8.253846525811179 24.996485269404992 0.9863368307396437 1.0448520896011224 0.18895496759580033 0.07688366810058163 993.7098348705831 3271399.7047029748 0.012231038094875683 0.01563514609828508 5.573826861390622e-09 8.253846525811179 0.05851525886147868 ARGPGGS(ph)PGGLQK ddPTM_A549_MK2206_60min_R1 4 ARGPGGSPGGLQK 13 1 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK 138.09 2.9174e-09 247457000.0 19503.4 26621.100000000002 26376.0 22233.699999999997 33363.0 23863.4 22005.4 20979.5 40257.6 38774.8 42164.0 True False 22795.09710765063 27976.00028208845 30116.513412939596 27680.957498108724 28455.34689569884 26388.6091487571 26003.496337488697 23953.408372024143 31139.31787817706 30015.545749731835 31693.51513279977 0.7192353707733692 0.88270424296155 0.9502421327122491 0.8733949952260602 0.8978286812449612 0.8326185668640902 0.8204674119778388 0.7557826347647582 0.9825138596239466 0.947056381217513 1.0 14.951900057679836 -8.85693735181651 8.675603565205952 0.9922010546445668 0.8485741368431953 0.4731913254658655 0.06256837064183698 0.14943169555118144 12.225391359225378 0.01070234512882986 0.01137774384898389 1.3901531501976711e-09 8.85693735181651 -0.1436269178013715 ARGPGGS(ph)PGGLQK ddPTM_A549_PD325901_60min_R1 5 ARGPGGSPGGLQK 13 1 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK;ARGPGGS(1)PGGLQK 135.61 5.8357000000000004e-09 469788000.0 20123.5 20949.399999999998 21212.3 21167.6 23824.000000000004 26131.6 24130.600000000002 23859.000000000004 23814.5 21771.2 22569.2 True False 22166.422905862266 22714.879459925698 22651.894237922177 22475.0745768924 22150.68442833818 25918.79291350436 25048.90318777098 23383.11352797659 22813.65938215454 20396.56271650377 19793.331477946445 1.119893481830479 1.1476026400727142 1.144420496527364 1.1354872019363658 1.119098341429702 1.3094709671478422 1.265522340980357 1.1813632057862442 1.1525932058265844 1.0304764884693332 1.0 14.27272683691755 -10.228271464249113 0.795808544037831 1.0060990130475145 1.1774456711227261 0.5276758594230005 0.058051941191056444 0.3702394798914713 0.4519606720356241 0.034225346334763644 0.012667000170689198 5.911919825619046e-11 10.228271464249113 0.17134665807521166 ARGS(ph)PGDTK ddPTM_A549_PD325901_60min_R1 2 ARGSPGDTK 9 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 ARGS(1)PGDTK;ARGS(1)PGDTK 104.59 0.0001682 53928000.0 12107.3 12661.0 10782.5 9460.599999999999 11321.6 10459.2 7196.599999999999 8813.2 9575.400000000001 12981.0 13727.7 True False 13336.424183076815 13727.98690378337 11514.265290439793 10044.959775418485 10526.409873399656 10374.023742936703 7470.470551130627 8637.413812178347 9172.979237350473 12161.377444648679 12039.279927060139 1.107742677624859 1.1402664434213878 0.9563915250911066 0.83434888434157 0.8743388256751076 0.8616814133226924 0.6205080865625188 0.717436081269647 0.7619209199324942 1.0101415963685758 1.0 13.555461486204736 -5.936863398263818 2.858873950111202 0.8486537183478547 1.1273612021432227 0.5125140388344833 0.1079851947007566 0.19142244773963035 3.124331967380478 0.017720485734840537 0.06627399021995653 1.1564759396039541e-06 5.936863398263818 0.2787074837953679 ARGS(ph)PPTSSNIVQGQIK ddPTM_A549_PD325901_60min_R1 1 ARGSPPTSSNIVQGQIK 17 1 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 ARGS(0.998)PPT(0.001)S(0.001)SNIVQGQIK 185.16 7.879199999999999e-40 40151000.0 6197.0 6526.6 6854.4 6875.2 7955.7 8183.1 6792.7 7989.0 8341.4 7906.9 7834.9 True False 6826.114878009714 7076.619487104693 7319.580802855599 7299.865489287907 7396.919077675029 8116.459546698156 7051.1999156080665 7829.653127750739 7990.839965999874 7407.656984600005 6871.256969523186 0.9934303007857666 1.0298871834501857 1.0652462621207315 1.0623770180137015 1.0765015935924633 1.1812190378991718 1.0261877771247678 1.139479015626752 1.1629371454804402 1.0780643217763461 1.0 12.746358322252966 -5.532531264374799 1.1251392055279268 1.0865789822224083 0.972327589089558 0.27097335634826214 0.05156959468993747 1.5671478406877828 2.168052546794452 0.009968858361857442 0.18730472004340906 2.9340582767740147e-06 5.532531264374799 -0.11425139313285038 ARHDS(ph)PDLAPNVTYSLPR ddPTM_A549_MK2206_60min_R1 3 ARHDSPDLAPNVTYSLPR 18 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR 141.91 3.4007e-17 92636000.0 3681.2700000000004 3646.8 3829.36 4338.0 5361.93 4209.0199999999995 3452.28 3588.3199999999997 6291.32 5717.5199999999995 6180.710000000001 True False 4302.578377589602 3832.4065432577986 4372.420829654773 5400.810194740217 4573.197199905723 4654.415702678645 4079.5145889638684 4096.975348769118 4866.346065173602 4425.928261009904 4645.86912808194 0.926108389834462 0.8249062635218952 0.9411416269187804 1.1624972735661103 0.9843577323913513 1.001839607264235 0.8780950294758103 0.8818533703424757 1.047456553556145 0.952658832823636 1.0 12.181732799349817 -6.000672550240508 24.98865480488369 1.007412614150822 0.8773864383757813 0.21374152908084842 0.07797810694180574 22.38763353339974 831962.0943918177 0.010720961404163776 0.03278229322238227 9.984525943106047e-07 6.000672550240508 -0.1300261757750406 ARHDS(ph)PDLAPNVTYSLPR ddPTM_A549_PD325901_60min_R1 4 ARHDSPDLAPNVTYSLPR 18 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR 143.48 2.9589e-17 226524000.0 5007.549999999999 4934.47 4423.62 4923.820000000001 5526.9 5366.0599999999995 4952.1900000000005 5025.9400000000005 5225.98 5740.699999999999 6261.32 True False 5515.9127896365235 5350.31510442397 4723.833454588013 5227.953178593439 5138.709610769907 5322.360586471524 5140.648300392349 4925.6936839263435 5006.350234434986 5378.231222286005 5491.2173337777 1.0044972643327947 0.9743404384148103 0.8602525027612115 0.952057232634945 0.9358051773257198 0.9692496696010371 0.9361582301197726 0.8970130636839495 0.9117013460093468 0.9794242142272 1.0 12.422910296683362 -10.899864009973117 1.1791415783659138 0.9996266827100391 0.9347792361540608 0.21001050393087028 0.03784790002464499 0.49596753440831715 1.236070180859903 0.02570458023547995 0.006284859085265691 1.2593196790817787e-11 10.899864009973117 -0.0648474465559783 ARHDS(ph)PDPS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 ARHDSPDPSPPR 12 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 ARHDS(1)PDPS(1)PPR 63.631 0.0020108 6842100.0 975.45 1048.5 837.91 709.94 1136.3 702.9 913.15 744.19 918.88 1023.3 1067.0 True False 1074.476965911664 1136.8607747110696 894.7756113621526 753.7913814092767 1056.4902080221905 697.1758154457525 947.9004229448531 729.3465466442386 880.2626690912753 958.6886633625289 935.7657642702832 1.1482328237874238 1.2148988754654875 0.9561961395968628 0.8055342588827116 1.129011391911788 0.7450324024083261 1.012967624097717 0.7794114451419243 0.9406869781966327 1.0244964070790954 1.0 9.8700036373007 -5.76857527297684 23.267209517354072 0.9448130032365696 1.1815658885147287 0.42214912577592434 0.1116025699791293 40.30298499671862 131417.0918572933 0.013777501983454662 0.0443040393453742 1.7038239828016075e-06 5.76857527297684 0.23675288527815908 ARHDT(ph)PDPS(ph)PLR ddPTM_A549_MK2206_60min_R1 3 ARHDTPDPSPLR 12 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 ARHDT(1)PDPS(1)PLR;ARHDT(1)PDPS(1)PLR;ARHDT(1)PDPS(1)PLR 61.126999999999995 0.0044326 50661000.0 3026.3999999999996 2864.9 2452.2 1929.4 4191.5 3382.4 2832.5 3373.1 4167.1 3963.7 4411.0 True False 3537.182331623917 3010.7111730227257 2799.958833455053 2402.1030866140586 3574.9359024464743 3740.3233229445927 3347.1285855261317 3851.2472546855106 3223.2585034913077 3068.2974170907955 3315.6269625932027 1.0668215609084781 0.9080367625759691 0.8444734178615686 0.7244792956851023 1.0782081165278201 1.1280893071334022 1.0095009551099474 1.1615441960555752 0.972141480285933 0.9254048937673716 1.0 11.695065984652963 -6.795104739155551 24.999992418666054 1.0178790171992818 0.8845669552864961 0.34299284512218475 0.0992984850523595 177.93945101784544 132137.86027700503 0.01431817840115411 0.02705989439231325 1.6028587813086775e-07 6.795104739155551 -0.13331206191278566 ARHDT(ph)PDPS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 ARHDTPDPSPLR 12 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 ARHDT(1)PDPS(1)PLR;ARHDT(1)PDPS(1)PLR 50.653 0.015237 68774000.0 2215.0 2860.2 2590.3999999999996 2732.5 2778.2 2987.6 2169.2400000000002 2683.7 2728.0 2614.4 3232.9 True False 2439.865169403184 3101.239091872771 2766.2001213406197 2901.28031904224 2583.0688162696893 2963.269976135624 2251.791615253676 2630.171498178078 2613.3516468755442 2449.326337823705 2835.273795041609 0.8605395266129414 1.093805860053547 0.9756377412926445 1.023280476162854 0.9110473989450396 1.0451442048799158 0.7942060548761323 0.9276604971194603 0.9217281418979122 0.8638764771526273 1.0 11.469272343877542 -6.753217866474089 24.98241474260024 0.949851764422431 0.994945309111095 0.07006816198737476 0.08258108664640701 414.96156928437273 1260919.0670200393 0.01082234855687772 0.02222722913938894 1.7651520992308905e-07 6.753217866474089 0.045093544688664 ARIPS(ph)GK ddPTM_A549_MK2206_60min_R1 2 ARIPSGK 7 1 A0A0B4J226;Q9NTM9 A0A0B4J226 CUTC Copper homeostasis protein cutC homolog 1 ARIPS(1)GK;ARIPS(1)GK 67.726 0.0064982 96291000.0 9141.7 10890.5 11287.4 9582.3 12393.5 7842.700000000001 7033.6 7265.0 13703.5 16089.2 15262.599999999999 True False 10684.595466893461 11444.77993291354 12888.123047361783 11929.963930165799 10570.432567570173 8672.609308437071 8311.514075606914 8294.835998129383 10599.679129992823 12454.638545565304 11472.475193669232 0.9313243468845729 0.997585938492944 1.1233951549072634 1.0398770734975327 0.9213733208508634 0.7559492752900273 0.7244743558210868 0.7230206087267601 0.9239226017975583 1.0856104140837934 1.0 13.485889066839267 -6.793652500685851 6.687933019624114 0.907632111722032 1.0284864487663632 0.24101802213769252 0.11707311283712485 0.2570094963927924 35.23310837607381 0.018608142624082828 0.03593447195361322 1.6082275563658777e-07 6.793652500685851 0.12085433704433124 ARIPS(ph)GK ddPTM_A549_PD325901_60min_R1 1 ARIPSGK 7 1 A0A0B4J226;Q9NTM9 A0A0B4J226 CUTC Copper homeostasis protein cutC homolog 1 ARIPS(1)GK 58.246 0.00926 33325000.0 7404.8 7687.1 6790.2 8231.3 8590.4 8774.3 8008.3 8811.9 9602.0 10136.0 10653.0 True False 8156.5298448743515 8334.918894879798 7251.023804789641 8739.728706361351 7987.039939271165 8702.845009909894 8313.060238809905 8636.139741698176 9198.46133185446 9496.011230179418 9342.748534930957 0.8730332208320137 0.8921270719978115 0.7761124874205154 0.9354558429658021 0.8548918885496033 0.931508000817043 0.8897874332942579 0.9243682102123492 0.9845562360437047 1.01640445471431 1.0 13.189631322218403 -8.294611646811703 0.6705328994055657 0.9996748865357947 0.8622695166481694 0.6561608983713509 0.03910888995880054 0.2584990702150392 0.24007508818938214 0.008990072049380989 0.012129798500340924 5.074442703719014e-09 8.294611646811703 -0.1374053698876253 ARKSGIPT(ph)SEPGSQ ddPTM_A549_PD325901_60min_R1 1 ARKSGIPTSEPGSQ 14 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 ARKS(0.27)GIPT(0.686)S(0.043)EPGS(0.001)Q 54.768 0.032362 8841100.0 1959.8 1737.8 2186.8 2235.0 2396.2 2623.5 2608.9 2540.4 2748.1 2218.1 2869.9 True False 2158.7574532714934 1884.2505048096311 2335.2093982966608 2373.0508739467173 2227.8991784412324 2602.1350858186534 2708.1831171448584 2489.729729094753 2632.606913775176 2078.048787456685 2516.9204937950176 0.8576979124265124 0.748633303854805 0.9278041972536158 0.9428390288040551 0.8851686749476944 1.0338566880573765 1.0759907290760125 0.9891968122285555 1.0459634780937106 0.8256314780620659 1.0 11.297443929043661 -6.422457899941197 0.8341471241238307 1.0242524923175726 0.7976444491735984 0.36079929291484536 0.07780799353306019 0.3075960987439382 0.34763042967596874 0.00801102159897442 0.04439870507399766 3.780437826996825e-07 6.422457899941197 -0.2266080431439742 ARLS(ph)ASTASELSPK ddPTM_A549_MK2206_60min_R1 2 ARLSASTASELSPK 14 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 ARLS(0.666)AS(0.159)T(0.138)AS(0.037)ELSPK;ARLS(0.63)AS(0.13)T(0.173)AS(0.066)ELSPK 61.815 0.0017759 5975100.0 2373.3 3288.5 2648.3 2684.6 3245.6 2441.1000000000004 2431.5 2428.0 4270.4 4693.799999999999 5066.8 True False 2773.855018385886 3455.870603680837 3023.868762188651 3342.327120516273 2768.176539420321 2699.4155817289634 2873.272076154207 2772.176435438147 3303.1612184275073 3633.467320014321 3808.5737234339667 0.7283185832319571 0.907392334935526 0.7939635626804163 0.8775797354140997 0.7268276106585169 0.7087733565769233 0.754422071043316 0.7278778452891911 0.8672961214071606 0.9540231025745348 1.0 11.89503510721733 -9.573702712859902 0.9652416700699781 0.9762029131351394 0.7832765424279685 0.5700713414815491 0.06449041865706828 0.23709801444545797 0.4632449839876534 0.020318927817670883 0.013861930782479673 2.668684831409309e-10 9.573702712859902 -0.1929263707071709 ARLS(ph)YSDK ddPTM_A549_MK2206_60min_R1 5 ARLSYSDK 8 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 ARLS(0.989)YS(0.011)DK;ARLS(0.989)Y(0.001)S(0.01)DK;ARLS(0.98)Y(0.003)S(0.016)DK;ARLS(0.872)Y(0.078)S(0.05)DK;ARLS(0.996)Y(0.002)S(0.001)DK 120.32 0.00033568 239372000.0 25703.7 24807.0 23545.500000000004 22085.8 29866.7 26337.3 25253.700000000004 25862.100000000002 34465.4 32336.100000000002 33920.7 True False 30041.85616486969 26069.570340736038 26884.605951030073 27496.821991469253 25473.347994178246 29124.29560471519 29841.970400812446 29528.131874359526 26659.04192993429 25031.35255160321 25497.254026305873 1.1782388854060553 1.0224461941603475 1.0544118171820718 1.07842287499275 0.9990624075791471 1.1422522431108562 1.1703993837934104 1.1580906651318192 1.0455652166476352 0.9817273862423779 1.0 14.638054261302237 -9.042267525175122 3.5705104449145337 1.0181907451499976 1.096157469509227 0.3266876722506692 0.05820038689946414 0.22190842128679628 5.926378837482942 0.011080564061559545 0.011078006821817463 9.072614854067702e-10 9.042267525175122 0.07796672435922947 ARLS(ph)YSDK ddPTM_A549_PD325901_60min_R1 3 ARLSYSDK 8 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 ARLS(0.998)YS(0.002)DK;ARLS(0.993)YS(0.007)DK;ARLS(0.995)Y(0.002)S(0.004)DK 81.79899999999999 0.0010192 386627000.0 27282.199999999997 26123.100000000002 26017.2 26182.1 31570.0 25044.6 26957.899999999998 25736.5 29028.4 29084.7 29623.1 True False 30051.868859905884 28324.585316027416 27782.883646133097 27799.308853136627 29352.632110587478 24840.645081110673 27983.797636428895 25223.165317606326 27808.43729698021 27248.287078374055 25979.64649630273 1.15674664257586 1.0902606130556243 1.0694096107153341 1.0700418443758601 1.1298318518215702 0.956157932504811 1.0771431258855422 0.9708817755159194 1.0703932134310505 1.0488320956273163 1.0 14.66509417979249 -2.0000000000000315 0.2947583855406068 1.0238605367392815 2.020973950518332 0.4055991967796845 0.045407132277506666 35.45210752297832 0.4429760060655639 0.015170002412653488 18.844064517896722 0.009999999999999273 2.0000000000000315 0.9971134137790507 ARNS(ph)GTQS(ph)DGEEK ddPTM_A549_PD325901_60min_R1 1 ARNSGTQSDGEEK 13 1 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 2 ARNS(0.967)GT(0.297)QS(0.736)DGEEK 66.285 0.015763 8970100.0 962.2 861.07 902.97 454.99 1034.4 808.88 393.44 747.66 615.71 824.91 1120.2 True False 1059.8818356657982 933.6353908254284 964.2509741997143 483.0936989427369 961.7473124862743 802.2927494633088 408.4125744986291 732.7473347720766 589.833849889201 772.825041819979 982.4225015328693 1.078845236150505 0.9503399905526201 0.9815033477909941 0.49173720897981066 0.9789548905747418 0.8166473673103936 0.41571989023193673 0.74585764640852 0.6003871541713326 0.7866524235897933 1.0 9.940199794536271 -6.040542955655762 24.84674368402606 0.7686920529485856 1.0024251697538176 0.309589954604199 0.175558922797731 542.987139198086 332769.23037544405 0.028236438862630175 0.0747179214925427 9.108713543875206e-07 6.040542955655762 0.233733116805232 ARNS(ph)GTQSDGEEK ddPTM_A549_MK2206_60min_R1 3 ARNSGTQSDGEEK 13 1 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 ARNS(0.958)GT(0.018)QS(0.024)DGEEK;ARNS(1)GTQSDGEEK;ARNS(0.969)GT(0.015)QS(0.015)DGEEK 166.77 3.8568000000000003e-20 34567800.0 9010.300000000001 6873.799999999999 5749.8099999999995 3435.2300000000005 789.46 231.21 411.68 494.88 437.875 9667.5 10085.0 True False 10531.018359315027 7223.647059626373 6565.219517245001 4276.861504213335 673.3314797913379 255.67648873522336 486.47692712776603 565.0307555064378 338.6970116426904 7483.605035629652 7580.616168159702 1.3892034797313284 0.9529102779226998 0.8660535465204535 0.5641838881352571 0.08882279023959581 0.033727665807579375 0.06417379752995263 0.07453625707626438 0.04467935114104501 0.9872027378278934 1.0 12.88809940306107 -5.864754997543676 1.4387830173675507 0.4007069071590831 1.3226963475108244 0.47239395651524074 0.35020474987122974 0.46706505512630614 1.605622640303245 0.06401171229303579 0.4471521359424912 1.3653531683420883e-06 5.864754997543676 0.9219894403517414 ARNS(ph)GTQSDGEEK ddPTM_A549_PD325901_60min_R1 3 ARNSGTQSDGEEK 13 1 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 ARNS(0.982)GT(0.017)QSDGEEK;ARNS(0.97)GT(0.029)QS(0.001)DGEEK;ARNS(0.946)GT(0.054)QSDGEEK 182.49 1.1947e-25 60071200.0 10693.2 11608.5 9249.7 9021.7 10161.1 7531.15 6552.7699999999995 7794.2 8126.099999999999 11855.5 14310.7 True False 11778.765792082215 12586.789035034291 9877.440264964622 9578.949919232713 9447.419389892004 7469.818811344827 6802.139248163328 7638.738566568389 7784.588276273954 11106.941706727714 12550.574623001623 0.9385041040666853 1.0028854784040164 0.7870109984336567 0.7632279960853131 0.7527479556655182 0.5951774349562274 0.5419783119489164 0.6086365601594655 0.6202575188873842 0.884974755368719 1.0 13.615465798448739 -5.8202304135669145 5.471745900831456 0.7587742459455667 0.9707250302276911 0.31460459519460493 0.13216521097944461 0.23942413811683377 14.304454526401667 0.02474097238755952 0.08180719311868646 1.512758446272951e-06 5.8202304135669145 0.21195078428212433 ARNS(ph)GTQSDGEEKQPGLVMER ddPTM_A549_MK2206_60min_R1 2 ARNSGTQSDGEEKQPGLVMER 21 2 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 ARNS(0.83)GT(0.063)QS(0.107)DGEEKQPGLVMER;ARNS(0.863)GT(0.122)QS(0.014)DGEEKQPGLVMER 67.49600000000001 0.00022492 36028000.0 6115.6 6133.700000000001 7368.8 6116.5 7650.5 5733.9 5523.4 4945.3 9466.8 9216.7 10251.400000000001 True False 7147.763767935242 6445.879130849061 8413.806643815185 7615.042774580119 6525.121584556064 6340.657492145224 6526.930283952348 5646.311419346073 7322.5849153731615 7134.6410687238495 7705.694455753337 0.9275950154756624 0.836508528577375 1.091894662074636 0.9882357545197585 0.8467921511842691 0.8228534791450328 0.8470268736231965 0.7327453030700358 0.950282282462662 0.925892028251507 1.0 12.911709266414974 -8.98331250211548 21.23804166923965 0.9780663391840159 0.8874154952146037 0.10776563442636222 0.09083362956149645 26.922612768198206 34266.637798661315 0.016882542293868555 0.01711950407253531 1.0391721472090429e-09 8.98331250211548 -0.09065084396941214 ARNS(ph)GTQSDGEEKQPGLVMER ddPTM_A549_PD325901_60min_R1 1 ARNSGTQSDGEEKQPGLVMER 21 2 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 ARNS(0.901)GT(0.093)QS(0.005)DGEEKQPGLVMER 68.657 0.00019334 17326000.0 3541.5 3564.2 4041.2 3515.8 4203.7 4233.0 3873.7 4122.3 4382.1 4833.5 4853.6 True False 3901.030472885496 3864.5676425609877 4315.460133709739 3732.9629810388697 3908.4466139777187 4198.527851446678 4021.1157732699726 4040.077492618211 4197.935576163241 4528.311985109732 4256.637969505385 0.916458129827468 0.907892019534385 1.0138189257873838 0.8769745061200577 0.9182003830200938 0.9863483532132616 0.9446694320910783 0.9491240555483892 0.9862092116448032 1.0638236132719352 1.0 12.055498677621829 -8.432514141769731 0.5905877248048605 0.9989126262248328 0.9290340758004041 0.4198319975874467 0.03995032592932774 0.5322763923416444 0.4003630471320728 0.009746271716820215 0.012085796862981724 3.6939061583317074e-09 8.432514141769731 -0.0698785504244287 ARNSGT(ph)QSDGEEKQPGLVMER ddPTM_A549_PD325901_60min_R1 1 ARNSGTQSDGEEKQPGLVMER 21 2 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 ARNS(0.4)GT(0.516)QS(0.084)DGEEKQPGLVMER 97.441 2.6374e-07 25689000.0 4235.4 4448.5 3540.4 4008.5 4857.4 4437.0 4197.1 4254.1 4551.6 4995.4 5093.4 True False 4665.374690063312 4823.390707012106 3780.6728341546986 4256.095941035979 4516.232981120294 4400.866543082662 4356.822937241248 4169.248638223114 4360.312080615366 4679.989591479702 4466.94408972283 1.0444220022357154 1.0797965253492559 0.8463667236966215 0.952798122284102 1.0110341411057426 0.9852074381695994 0.9753475417937424 0.9333559038303997 0.9761286447813856 1.0476937918804556 1.0 12.125072481997591 -10.485754392127708 1.0996979485338019 0.9984989419988282 0.976822314087447 0.050324223754419806 0.059072387656288285 1.9299271139611776 4.520657764639098 0.026903225447787102 0.01013923573571525 3.267725806128914e-11 10.485754392127708 -0.02167662791138114 ARPAAAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ARPAAASPR 9 1 Q8NC56;D6RBV0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 ARPAAAS(1)PR;ARPAAAS(1)PR 86.898 0.00096551 18965900.0 1703.35 1557.8000000000002 1384.5 1372.83 1872.45 1279.8000000000002 1479.35 1423.57 1743.5500000000002 2453.6 2142.8900000000003 True False 1990.833837090799 1637.0853660982236 1580.842918570475 1709.1734116286807 1597.0150854195167 1415.2275865375143 1748.128745983436 1625.3654070002826 1348.6387088772212 1899.3300559007935 1610.7512722446947 1.235966018711525 1.0163489511430468 0.9814320471511778 1.0611032510604992 0.9914721862637205 0.8786133594451833 1.085287825690987 1.0090728686715373 0.8372730986565038 1.179157880318756 1.0 10.653518018928112 -2.0000000000000004 0.5240414423183793 0.9394275988625683 10.856328243345853 0.1424733283821623 0.10215172175043308 70.51445411960529 0.6289367386090289 0.01529266335450989 783.1357983995073 0.00999999999999999 2.0000000000000004 9.916900644483285 ARPAAAS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ARPAAASPR 9 1 Q8NC56;D6RBV0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 ARPAAAS(1)PR 61.78 0.0062118 15778000.0 804.85 844.5 928.86 735.11 644.78 634.33 770.28 798.43 794.54 719.71 1047.6 True False 886.5577795007454 915.6689787730077 991.8980252889316 780.5160751440593 599.4928771702434 629.164226791441 799.5934269133895 782.504687293782 761.1482468872781 674.2673877735233 918.7518412835503 0.9649589145445108 0.9966445101146837 1.0796147345981824 0.8495396037015093 0.6525079463598317 0.6848032281627449 0.8703040265979881 0.8517040751728747 0.8284590165543606 0.7338950056758875 1.0 9.843531425939508 -6.273792675276686 24.387150927014034 0.8696099654302598 1.0120298991151817 0.3297231533590318 0.10708720215366535 639.1804037839652 1261832.6154056708 0.017633144186695517 0.04126532443783165 5.323623392486009e-07 6.273792675276686 0.1424199336849219 ARPAPSRDPS(ph)PPR ddPTM_A549_MK2206_60min_R1 4 ARPAPSRDPSPPR 13 2 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 1 ARPAPS(0.003)RDPS(0.997)PPR;ARPAPSRDPS(1)PPR;ARPAPSRDPS(1)PPR;ARPAPSRDPS(1)PPR 128.74 1.0276e-08 254519000.0 10743.9 12146.8 9482.7 9373.2 8804.300000000001 6832.7 6734.5 7346.3 9027.2 15580.900000000001 15996.2 True False 12557.20765686432 12765.020236822369 10827.489450291261 11669.63442077894 7509.199132985689 7555.73177882081 7958.071477220026 8387.660522100192 6982.5536134762115 12061.163868594995 12023.902067339235 1.0443537868603998 1.061637076327846 0.9004971422465413 0.970536382899974 0.6245226458874009 0.6283926579329513 0.6618543158993863 0.6975822387046682 0.5807227615769643 1.0030989774406909 1.0 13.553617543455669 -6.658894535000949 7.338591332857757 0.7555109234228032 0.9956651641891208 0.4300705758897593 0.13917185669103888 0.22536053379203408 14.340692086341898 0.024777296378452572 0.05173088115711245 2.1933375054444246e-07 6.658894535000949 0.24015424076631753 ARPAPSRDPS(ph)PPR ddPTM_A549_PD325901_60min_R1 5 ARPAPSRDPSPPR 13 2 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 1 ARPAPS(0.027)RDPS(0.973)PPR;ARPAPSRDPS(1)PPR;ARPAPS(0.015)RDPS(0.985)PPR;ARPAPS(0.002)RDPS(0.998)PPR;ARPAPS(0.002)RDPS(0.998)PPR 88.133 3.9426e-05 422693400.0 12169.289999999999 11765.03 11376.24 11978.6 13036.319999999998 12453.309999999998 11792.849999999999 11770.07 13798.75 13662.710000000001 14577.17 True False 13404.707362242194 12756.51036747638 12148.30005728846 12718.490916625567 12120.693856062524 12351.894372241773 12241.633360045127 11535.306720408711 13218.836523945705 12800.044158907327 12784.270502294126 1.0485312681577514 0.9978285710699907 0.9502536773692686 0.9948546469149918 0.9480942892977332 0.9661790533941875 0.9575543131575929 0.9023046499476611 1.0339922423867358 1.0012338331397455 1.0 13.64208221922566 ARPAT(ph)DSFDDYPPR ddPTM_A549_MK2206_60min_R1 1 ARPATDSFDDYPPR 14 1 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ARPAT(0.5)DS(0.5)FDDYPPR 79.837 0.00022030000000000004 4215600.0 1769.1 1854.7 1576.8 1737.7 2407.0 1499.4 1329.5 1759.6 2664.9 2453.7 2793.6 True False 2067.6808296576364 1949.09630793579 1800.4139501639052 2163.4365780083176 2052.933488533619 1658.0655127788316 1571.0529406732537 2009.0286885489961 2061.3044049708383 1899.4074658313396 2099.872020562314 0.9846699272196325 0.9281976657862471 0.8573922279710082 1.0302706816527714 0.9776469558291816 0.7896031265442676 0.748166043115594 0.9567386340101853 0.9816333494547216 0.9045348703311485 1.0 11.036085688302823 -8.513788779050248 24.186128947171827 0.9901615647306824 0.9012805490100483 0.07747986990790834 0.08284275432194284 349.7972613455573 930724.5046192039 0.013778007147882939 0.016040048370717524 3.063452994695984e-09 8.513788779050248 -0.08888101572063412 ARPATDS(ph)FDDYPPR ddPTM_A549_MK2206_60min_R1 1 ARPATDSFDDYPPR 14 1 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ARPAT(0.013)DS(0.986)FDDY(0.001)PPR 48.883 0.0080356 4922200.0 1202.9 1653.7 1054.5 899.57 1518.0 1220.9 1269.4 1479.0 1825.5 2017.0 1803.6 True False 1405.9201119185866 1737.8662664762037 1204.043956397665 1119.9646903832322 1294.7042108824405 1350.0948276321708 1500.0335486202537 1688.6527792475379 1412.0271647244801 1561.3582991326628 1355.7163431723188 1.0370311746989735 1.2818804429322364 0.8881238044090057 0.826105472596548 0.9549963880002269 0.9958534721747221 1.1064508856699615 1.245579717137703 1.0415358432726394 1.1516850903184883 1.0 10.404839639310904 -7.618027918607395 18.227688105056504 1.0467788400083886 0.9955120883968744 0.07444074409742019 0.12859626490416454 7.6859636767716255 1454.371868458692 0.02047453449462069 0.030368630666673765 2.4097505129697535e-08 7.618027918607395 -0.05126675161151417 ARPATDS(ph)FDDYPPR ddPTM_A549_PD325901_60min_R1 2 ARPATDSFDDYPPR 14 1 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ARPAT(0.035)DS(0.965)FDDYPPR;ARPAT(0.206)DS(0.794)FDDYPPR 92.633 1.6898e-05 15577800.0 6817.5 6461.9 5918.6 5259.200000000001 6930.9 5479.6 5858.0 6483.700000000001 6086.1 6779.7 7063.4 True False 7509.60758122176 7006.466991040023 6320.27178743306 5584.048839490189 6444.09749430696 5434.97595435559 6080.9293956205975 6354.377517135752 5830.322381982857 6351.628584969158 6194.646578581741 1.2122737731619029 1.1310519336591673 1.020279641018694 0.9014313841240402 1.0402687889552418 0.8773665915255368 0.9816426681460205 1.0257853190699027 0.9411872506401656 1.0253415597477649 1.0 12.596806259703962 -5.6937583831812395 2.3201564429073804 0.9701127193322818 1.20531363446579 0.7066251909815187 0.04950638803014288 0.11240109808257501 1.1226315779118698 0.006220743599894779 0.037071047470838815 2.024144984952289e-06 5.6937583831812395 0.23520091513350816 ARPFPDGLAEDIDKGEVSAR ddPTM_A549_MK2206_60min_R1 2 ARPFPDGLAEDIDKGEVSAR 20 2 P13639 P13639 EEF2 Elongation factor 2 0 ; 80.98 6.2253e-05 8836900.0 1872.6799999999998 2229.67 2177.74 1699.24 3058.0 2047.14 2045.0300000000002 2096.63 3551.5 3272.5 3069.2999999999997 False True 2188.74260136977 2343.1506793094263 2486.576278430962 2115.5538762817814 2608.172250908105 2263.7669960184476 2416.585479702913 2393.833723160083 2747.090920580109 2533.2399771500423 2307.1081016294065 0.9486952951289798 1.015622405233012 1.0777892360894599 0.9169721500209119 1.1304941667302328 0.9812140984723043 1.0474522099749843 1.0375906189525432 1.190707500285731 1.098015292547813 1.0 11.171869889043117 -8.54239163891716 24.93611450081433 1.091324361069182 1.0200661791082157 0.2017341241083126 0.06861593739039595 353.00315415123686 451111.3295368147 0.013951976404274381 0.01582115709726308 2.8681929308875646e-09 8.54239163891716 -0.07125818196096634 ARPFPDGLAEDIDKGEVSAR ddPTM_A549_PD325901_60min_R1 2 ARPFPDGLAEDIDKGEVSAR 20 2 P13639 P13639 EEF2 Elongation factor 2 0 ; 162.85 1.4037e-27 13338500.0 3072.3999999999996 3266.5 3243.5 3186.8 3423.8 3035.3 2855.5 3355.8 3440.3999999999996 2771.7 3739.9 False True 3384.307786218661 3541.779418782746 3463.6234147499626 3383.641398252079 3183.32409946878 3010.5815231505067 2964.167615089556 3288.8659364258283 3295.811952313275 2596.694388978719 3279.9160091794092 1.0318275762998483 1.0798384497866613 1.0560097895971776 1.0316244040342424 0.9705504929271663 0.9178837246822408 0.9037327805937173 1.00272870622948 1.0048464482289725 0.7916953915013137 1.0 11.679443156001845 -6.574727930982275 3.9773894672513963 0.9865533670866935 1.0568547158310677 0.23670516836742816 0.0686122957615583 0.18076963440584828 5.961335336241462 0.0059355715989966576 0.01310842269225843 2.6623924253288805e-07 6.574727930982275 0.07030134874437421 ARPGGGGPQRPGPPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ARPGGGGPQRPGPPSPR 17 2 O00268 O00268 TAF4 Transcription initiation factor TFIID subunit 4 1 ARPGGGGPQRPGPPS(1)PR;ARPGGGGPQRPGPPS(1)PR 49.973 0.0041026000000000005 17951500.0 2102.71 2211.57 1578.72 1142.68 2331.11 1845.29 1494.4 1553.0900000000001 2413.8 2524.0 3183.4 True False 2457.5960416762246 2324.1294666207777 1802.606235034728 1422.6366512968536 1988.206807002744 2040.5573629956325 1765.9131361730801 1773.2452636386474 1867.0781540465352 1953.82664700587 2392.8739226296075 1.027047860079269 0.9712711750674753 0.7533226961886003 0.5945305508338157 0.8308865704123009 0.8527642612917931 0.7379883743446293 0.7410525255296234 0.7802659957925163 0.8165188431067634 1.0 11.224528669842405 -10.680209990776024 0.9436275169428452 1.0000145112687187 0.8043365943363809 0.010674679140340815 0.12310748929738213 0.6080189118888386 0.9633321454499691 0.07982247910830337 0.021089738688659623 2.0882861551743886e-11 10.680209990776024 -0.19567791693233771 ARPPS(ph)GSSK ddPTM_A549_MK2206_60min_R1 4 ARPPSGSSK 9 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 ARPPS(0.992)GS(0.006)S(0.002)K;ARPPS(0.975)GS(0.02)S(0.005)K;ARPPS(0.98)GS(0.015)S(0.005)K;ARPPS(0.947)GS(0.027)S(0.027)K 98.182 0.00023471 187717000.0 18710.1 14273.2 10725.01 8717.97 17772.7 19060.3 17152.300000000003 18920.0 20143.1 24423.0 24629.4 True False 21867.907461973507 14999.64491423364 12245.977688766727 10853.873041364546 15158.359373353334 21077.24829479684 20268.650887032614 21601.967940069924 15580.72001192094 18905.827337489827 18513.24024314055 1.181203677734151 0.8102117574902237 0.6614713322971141 0.5862762487180535 0.8187847818249833 1.1384959098451874 1.0948192007902275 1.1668388491892334 0.8415987589041224 1.0212057473026495 1.0 14.176269801694605 -7.028636506082523 23.855521751334486 0.9713635843481477 0.7871395837171788 0.26598850967085597 0.16881558044750614 508.38424382429923 423507.1273304439 0.026480778056315022 0.04593820750070103 9.361889136742892e-08 7.028636506082523 -0.1842240006309689 ARPPS(ph)GSSK ddPTM_A549_PD325901_60min_R1 2 ARPPSGSSK 9 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 ARPPS(0.994)GS(0.005)S(0.001)K;ARPPS(0.85)GS(0.117)S(0.033)K 99.539 0.00022397 209120000.0 23394.0 22257.0 17308.9 15889.8 18237.5 14894.900000000001 11292.5 15598.2 16657.6 22796.0 29075.0 True False 25768.94165824742 24132.67550094828 18483.586040871156 16871.276857645877 16956.56091595944 14773.60087278836 11722.242266993113 15287.081664448813 15957.53900036438 21356.656669610293 25498.959321610575 1.0105879747181694 0.9464180555986708 0.7248760942649988 0.6616457026678471 0.6649903120394649 0.5793805420234391 0.45971453654810207 0.5995178654798232 0.6258113830881026 0.8375501290168479 1.0 14.638150747724218 -5.6947995088436 4.382902519570017 0.7381700216203447 0.9937453920121261 0.34142559419157514 0.14309126740979441 0.2643427292557137 9.723011015865584 0.02716479624995124 0.11319898107586288 2.019298353480712e-06 5.6947995088436 0.25557537039178135 ARPS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 ARPSPAR 7 1 Q16099 Q16099 GRIK4 Glutamate receptor ionotropic, kainate 4 1 ARPS(1)PAR 51.864 0.040471 12431000.0 2278.2 2113.5 1423.1 1188.8 1359.1 1192.7 1351.4 1619.9 1473.0 3269.8 3433.8 True False 2662.7044633576556 2221.0681225116145 1624.9169789943248 1480.0560533672597 1159.1781903888834 1318.9107223498147 1596.931887195063 1849.5257857356899 1139.3678518976483 2531.1499090252732 2581.0926919411763 1.0316190781025771 0.8605146686309835 0.6295461546451727 0.5734222788621147 0.4491036660590031 0.510989290104841 0.6187038118317439 0.7165669762695376 0.4414284909081501 0.9806505271694282 1.0 11.333766236943507 -10.997680021081624 1.2727965225229352 1.000177131865841 0.6217682202382996 0.3725629353875122 0.16832882314323871 0.39752296864705117 1.1452963424300564 0.12980124765217246 0.029561252169071937 1.0053562425230432e-11 10.997680021081624 -0.3784089116275414 ARPS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 ARPSPAR 7 1 Q16099 Q16099 GRIK4 Glutamate receptor ionotropic, kainate 4 1 ARPS(1)PAR 46.457 0.051395 23511000.0 2452.8 2707.4 2102.1 2162.2 2430.1 1668.6 1441.2 1805.6 2012.5 2632.0 2743.3 True False 2701.8064503440764 2935.5620996211255 2244.761146954183 2295.7541832875136 2259.4181593898847 1655.0114748225672 1496.0456546548999 1769.5858915342026 1927.9216236572686 2465.8150708200696 2405.8914912114965 1.1229959706052957 1.2201556513851384 0.9330267616615678 0.954221830732473 0.9391188952799137 0.6878994671489442 0.6218259053327296 0.7355219044575948 0.8013335724822966 1.0249070167243488 1.0 11.232355861248726 -5.9754896767978884 1.4894347855864176 0.8566898993992735 1.1879686124036248 0.48081588637572126 0.12681611568842346 0.36157843947769863 1.4081593769623215 0.020968797482898018 0.11819582182145906 1.0580600658393605e-06 5.9754896767978884 0.3312787130043513 ARPS(ph)PGHCLPEDEDPEER ddPTM_A549_MK2206_60min_R1 3 ARPSPGHCLPEDEDPEER 18 1 H3BPY8;H3BPM3;H3BRE8;Q9BWH6-2;Q9BWH6 H3BPY8 RPAP1 RNA polymerase II-associated protein 1 1 ARPS(1)PGHCLPEDEDPEER;ARPS(1)PGHCLPEDEDPEER;ARPS(1)PGHCLPEDEDPEER 64.295 0.00069196 15534000.0 1107.5900000000001 703.8199999999999 947.0799999999999 1099.8899999999999 1212.35 924.4399999999999 971.8900000000001 995.9899999999999 1621.21 1537.06 1461.9299999999998 True False 1294.5241140243636 739.6414317417199 1081.3901851352305 1369.3630993759384 1034.0149209903334 1022.2636272063921 1148.4698326520709 1137.17463259145 1254.0085235403847 1189.8370784654676 1098.892433784602 1.1780262328006057 0.6730790102852776 0.9840728281392442 1.246130246488122 0.9409609978195687 0.9302672361531337 1.0451157887189408 1.0348370756134917 1.1411567547349113 1.0827602792455773 1.0 10.101834458173519 -7.944763545889743 8.250534983035681 1.0649176033344325 0.9863655386807055 0.055964842557185146 0.14104379823958826 0.6315078875866877 84.65212539664824 0.022041760477205345 0.030471973652528763 1.1356289470485094e-08 7.944763545889743 -0.078552064653727 ARPS(ph)PGHCLPEDEDPEER ddPTM_A549_PD325901_60min_R1 4 ARPSPGHCLPEDEDPEER 18 1 H3BPY8;H3BPM3;H3BRE8;Q9BWH6-2;Q9BWH6 H3BPY8 RPAP1 RNA polymerase II-associated protein 1 1 ARPS(1)PGHCLPEDEDPEER;ARPS(1)PGHCLPEDEDPEER;ARPS(1)PGHCLPEDEDPEER;ARPS(1)PGHCLPEDEDPEER 89.462 1.7857e-06 33771500.0 2239.07 1971.35 1997.3100000000002 1981.41 2061.21 2475.93 1951.5900000000001 2244.7599999999998 2249.3 1775.76 2558.67 True False 2466.378738083785 2137.4825829534257 2132.8594674007227 2103.7971955913945 1916.4377203884699 2455.766846971975 2025.8588254010258 2199.986500819847 2154.769743151452 1663.6382105469024 2243.9698107454974 1.0991140461307713 0.9525451602413963 0.9504849206024473 0.9375336448454561 0.8540389942910087 1.0943849757747472 0.9028012835555884 0.9803993308131725 0.9602489894619344 0.7413817256276742 1.0 11.131837551437343 -10.782079205635371 0.9090263787242986 1.0010879893635924 0.9663176521319681 0.0 0.1037200252317398 2.1609894999392956 3.0054732405108946 0.051697596468964574 0.011489409570252435 1.651660544682314e-11 10.782079205635371 -0.03477033723162437 ARPSLTVT(ph)PR ddPTM_A549_MK2206_60min_R1 2 ARPSLTVTPR 10 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 ARPSLTVT(1)PR;ARPSLT(0.002)VT(0.997)PR 104.41 0.00013718 40965000.0 2377.19 2449.7 2295.5 2149.2 3631.1 2509.2 2344.6000000000004 2872.1 3742.6 4354.7 3867.8 True False 2778.401555284514 2574.37926648531 2621.0364171748124 2675.754096481253 3096.9700000890834 2774.7218785278424 2770.5834710060253 3279.2289704373593 2894.907075704101 3370.970245529502 2907.318514150531 0.9556577794147594 0.8854823625121445 0.9015305355837954 0.9203512045404708 1.06523244185853 0.9543921194126778 0.9529686745779702 1.1279221572994709 0.995730967079795 1.1594774460116015 1.0 11.505473420674589 -6.650732785235629 8.14771209503469 1.0049457510364264 0.9114265859669933 0.372561440815789 0.06792321782038044 0.167903364047259 11.496036451663105 0.006726482894642951 0.014027840952279576 2.2349469285938102e-07 6.650732785235629 -0.09351916506943303 ARPSLTVT(ph)PR ddPTM_A549_PD325901_60min_R1 2 ARPSLTVTPR 10 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 ARPSLT(0.004)VT(0.996)PR;ARPSLTVT(1)PR 124.47 8.4164e-06 72324000.0 4544.2 4562.1 4756.1 5089.6 5638.3 4910.4 4788.799999999999 5466.4 5931.3 5190.5 6206.6 True False 5005.523838736766 4946.5641776913435 5078.877546752676 5403.973032679742 5242.28525907904 4870.411330437929 4971.0404045319065 5357.36836369216 5682.02808765136 4862.770944183727 5443.227546879046 0.9195874682120825 0.9087557216908061 0.9330636103325727 0.9927883753046828 0.9630839816874422 0.8947653370159862 0.9132523602439008 0.9842264203641248 1.0438711295303527 0.8933616870328832 1.0 12.410246631930717 -8.481857805313135 4.400698954457794 1.0206106867685207 0.9337602421240194 0.027347280656832895 0.047022692990502185 0.10356965860190914 4.4644209228846305 0.005244012924801396 0.00624647753428798 3.2971764913124356e-09 8.481857805313135 -0.08685044464450131 ARPSQFPEQSSSAQQNGSVSDIS(ph)PVQAAK ddPTM_A549_MK2206_60min_R1 2 ARPSQFPEQSSSAQQNGSVSDISPVQAAK 29 1 O00139-1;O00139-5;O00139;O00139-4 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ARPSQFPEQSSSAQQNGSVS(0.025)DIS(0.975)PVQAAK;ARPSQFPEQSSSAQQNGS(0.001)VS(0.26)DIS(0.739)PVQAAK 159.62 2.4797999999999998e-46 19019000.0 1585.3000000000002 2451.8 1839.06 1786.7200000000003 2177.92 1904.44 2121.48 2089.88 3013.96 3035.91 3043.4 True False 1852.8598831362 2576.5861475154866 2099.866361737969 2224.46648020891 1857.5508530731786 2105.966576735041 2506.9254551180834 2386.1268899890765 2331.3028723051184 2350.0958224689343 2287.639786433042 0.8099438968165683 1.1263076305964141 0.9179182728816518 0.9723849416333882 0.8119944687487398 0.9205848705834623 1.0958567297113495 1.0430518406525875 1.0190865214580644 1.0273015167887405 1.0 11.159644186761325 -7.726211415561429 24.97759911123625 1.018257641936875 0.9320912063988179 0.29196654681330725 0.08316045463387896 211.9276060732753 150262.17329712384 0.012069431799257955 0.017901479130871183 1.878402183657339e-08 7.726211415561429 -0.08616643553805703 ARPSQFPEQSSSAQQNGSVSDIS(ph)PVQAAK ddPTM_A549_PD325901_60min_R1 2 ARPSQFPEQSSSAQQNGSVSDISPVQAAK 29 1 O00139-1;O00139-5;O00139;O00139-4 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ARPSQFPEQSSSAQQNGSVS(0.002)DIS(0.998)PVQAAK;ARPSQFPEQSSSAQQNGSVS(0.009)DIS(0.991)PVQAAK 190.14 2.6895999999999995e-67 28601000.0 1871.29 2114.57 2263.8 2104.19 3223.7 2251.2 2667.7 2329.6 2207.8 2477.8 1990.72 True False 2061.261983229111 2292.7722349840615 2417.4350813352758 2234.161037337781 2997.2784331612575 2232.866973582981 2769.220783321453 2283.1343004641553 2115.0138438313147 2321.351285136007 1745.874060213812 1.1806475794575209 1.3132517901682281 1.3846560507573036 1.2796805269357001 1.7167781465257521 1.2789393143910552 1.5861515136906923 1.3077313836626603 1.2114355164726458 1.329621269962461 1.0 10.76973377761679 -9.30752386877799 0.9294989931796863 1.0449490128079688 1.3920812758932222 0.1477426336353429 0.16913521415930602 0.2847484486804669 0.5212099084680899 0.03964144518765766 0.031061453776700495 4.925792705019246e-10 9.30752386877799 0.34713226308525336 ARQEEGADAS(ph)EEDPTPAGEEDVK ddPTM_A549_MK2206_60min_R1 2 ARQEEGADASEEDPTPAGEEDVK 23 1 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(0.999)EEDPT(0.001)PAGEEDVK;ARQEEGADAS(1)EEDPTPAGEEDVK 123.28 3.4041999999999997e-16 25177000.0 1581.6 1851.98 1946.0 1305.78 2427.5 1777.85 1463.33 2007.82 2512.9 2132.13 2173.87 True False 1848.5354135925147 1946.2378715538496 2221.972061782699 1625.6961586186915 2070.417965689806 1965.9809069586809 1729.1981193496745 2292.434633690866 1943.7321622767163 1650.4803521714039 1634.0380832401904 1.131268256567797 1.1910602889343849 1.3598043304943503 0.9948949019566561 1.2670561273482088 1.2031426483404044 1.0582361189041494 1.4029260744921677 1.189526842864288 1.0100623535643731 1.0 10.674225892295933 -10.410935065965937 0.8818123536453772 1.0057968036665283 1.1998542723574799 0.30308934827880074 0.1126804301971164 0.5152055540336854 0.7543308323491081 0.05911317263422543 0.01995832037932904 3.882084050734505e-11 10.410935065965937 0.19405746869095153 ARQEEGADAS(ph)EEDPTPAGEEDVK ddPTM_A549_PD325901_60min_R1 2 ARQEEGADASEEDPTPAGEEDVK 23 1 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(1)EEDPTPAGEEDVK;ARQEEGADAS(1)EEDPTPAGEEDVK 136.16 6.7549e-23 33697000.0 1529.5 1647.6599999999999 1515.67 1983.31 1850.43 1573.6799999999998 1732.6100000000001 1747.96 2043.15 1770.01 2114.69 True False 1684.7737140416114 1786.5140906632726 1618.5324806641213 2105.814554276182 1720.4621804369456 1560.8644718319404 1798.5454216705714 1713.0955665519066 1957.2835107455167 1658.2512665282036 1854.5965361243907 0.9084313926102421 0.963289888590328 0.8727140642926143 1.135456965037134 0.9276746434738038 0.8416194258044547 0.9697771923100045 0.9237025591193095 1.0553689024113644 0.8941304667771589 1.0 10.856889650137488 -8.757886214363957 24.994947978857414 1.0261464272412797 0.9446176825959774 0.0 0.08211954867604136 104.24295320103998 733303.0663992655 0.012114516630385711 0.013469560185211954 1.7462796201871451e-09 8.757886214363957 -0.08152874464530224 ARQEEGADAS(ph)EEDPTPAGEEDVKDAR ddPTM_A549_MK2206_60min_R1 4 ARQEEGADASEEDPTPAGEEDVKDAR 26 2 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(0.905)EEDPT(0.095)PAGEEDVKDAR;ARQEEGADAS(1)EEDPTPAGEEDVKDAR;ARQEEGADAS(1)EEDPTPAGEEDVKDAR;ARQEEGADAS(1)EEDPTPAGEEDVKDAR 168.52 1.4636e-48 86105100.0 4080.94 4142.39 4183.96 3722.2200000000003 6808.9 5032.1 4352.42 3994.1900000000005 6716.66 6435.0 5793.75 True False 4769.702902596254 4353.219957421758 4777.308441735016 4634.1640670968045 5807.31982969529 5564.593481962357 5143.198375362981 4560.378664193864 5195.3472343020085 4981.329030698405 4355.001975634634 1.0952240502488377 0.9995908111585609 1.0969704419109572 1.0641014844594852 1.333482708431841 1.2777476366475025 1.180986462035643 1.047158804911748 1.192960936267983 1.1438178578489624 1.0 12.088457657961001 -3.5256414391460984 9.390524572227534 1.1141047411242333 0.7815972347064629 0.0 0.10455338091072547 0.0 0.0 0.015493313573390293 0.0 0.0002980976558284328 3.5256414391460984 -0.3325075064177704 ARQEEGADAS(ph)EEDPTPAGEEDVKDAR ddPTM_A549_PD325901_60min_R1 4 ARQEEGADASEEDPTPAGEEDVKDAR 26 2 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(0.994)EEDPT(0.006)PAGEEDVKDAR;ARQEEGADAS(0.998)EEDPT(0.002)PAGEEDVKDAR;ARQEEGADAS(0.999)EEDPT(0.001)PAGEEDVKDAR;ARQEEGADAS(1)EEDPTPAGEEDVKDAR 153.69 2.0797e-34 83518000.0 5203.68 5713.91 5580.929999999999 4434.74 6237.88 5033.8 4909.9 5638.370000000001 5809.7 6645.2 6456.82 True False 5731.95376285325 6195.44124866889 5959.685470658392 4708.6638177747045 5799.7528283177535 4992.806401751071 5096.748931300371 5525.908287134304 5565.538512775968 6225.62093792307 5662.672073154312 1.0122348051951287 1.0940844125585762 1.052451103236609 0.8315268404994904 1.0242077862522387 0.8817050214546325 0.9000607602660096 0.9758481889374488 0.982846691610691 1.0994139970487777 1.0 12.46726727005311 -6.0465254794835195 24.999472039360487 0.9689152700385757 1.058187063097781 0.23958781002484697 0.071298330761038 365.22340689179794 196244.5806038745 0.008298651796026449 0.02195690357749879 8.984098825035426e-07 6.0465254794835195 0.0892717930592053 ARQEEGADAS(ph)EEDPTPAGEEDVKDAREEDGVDTIEEDLTR ddPTM_A549_MK2206_60min_R1 2 ARQEEGADASEEDPTPAGEEDVKDAREEDGVDTIEEDLTR 40 3 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(0.949)EEDPT(0.051)PAGEEDVKDAREEDGVDTIEEDLTR;ARQEEGADAS(1)EEDPTPAGEEDVKDAREEDGVDTIEEDLTR 104.9 4.2461999999999995e-15 41594000.0 1228.56 916.96 1083.1799999999998 1087.9 1221.6799999999998 752.54 958.04 918.02 1521.64 1140.25 1436.82 True False 1435.910892591818 963.6293473471732 1236.7912116555929 1354.4355488376875 1041.9724903497106 832.1732833043766 1132.1034669293742 1048.1521463183396 1176.9909695597687 882.6667330619824 1080.0179397853472 1.3295250381463148 0.8922345748615008 1.145158025709651 1.2540861581492624 0.9647733171513817 0.7705180188671408 1.0482265388613627 0.9704951257815766 1.0897883509172956 0.8172704364868345 1.0 10.076839561332681 -5.24352286277802 24.040116577649407 1.0297800458208992 1.3295254675374208 0.30173039835198623 0.13734161550011806 1993.5909709855705 2674900.7401342895 0.016460335007259064 0.6808473334352039 5.70791026948149e-06 5.24352286277802 0.29974542171652163 ARQEEGADAS(ph)EEDPTPAGEEDVKDAREEDGVDTIEEDLTR ddPTM_A549_PD325901_60min_R1 3 ARQEEGADASEEDPTPAGEEDVKDAREEDGVDTIEEDLTR 40 3 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(0.999)EEDPT(0.001)PAGEEDVKDAREEDGVDTIEEDLTR;ARQEEGADAS(1)EEDPTPAGEEDVKDAREEDGVDTIEEDLTR;ARQEEGADAS(0.994)EEDPT(0.006)PAGEEDVKDAREEDGVDTIEEDLTR 106.88 3.2878999999999996e-15 178246000.0 1145.72 918.0799999999999 1222.3 1028.81 1038.06 1693.0400000000002 1276.95 1069.75 950.0899999999999 904.12 1978.31 True False 1262.0326509655138 995.4498236020406 1305.2526282869978 1092.357257102963 965.1502467125895 1679.2524435656226 1325.5450310238516 1048.4129970473596 910.1610213269738 847.0337089019157 1734.9904115403417 0.7274003605847416 0.5737494668447594 0.7523111480069689 0.6296042040561812 0.5562856372535913 0.9678741925004447 0.7640071220030661 0.6042759603014567 0.5245913840635718 0.4882065648708172 1.0 10.760711974404284 -10.960042723683838 1.2246841036096923 1.0000061876820243 0.666129689550499 0.0 0.19145948781580743 0.32211989977665945 0.8590157175215136 0.08978304670364308 0.020844878300479392 1.096370335496552e-11 10.960042723683838 -0.3338764981315253 ARQPLSEASNQQPLS(ph)GGEEK ddPTM_A549_MK2206_60min_R1 1 ARQPLSEASNQQPLSGGEEK 20 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 ARQPLSEASNQQPLS(1)GGEEK 138.44 5.3496000000000004e-18 8895600.0 1859.9 1844.6 2396.5 2092.9 2832.1 2255.4 1756.6 2206.2 2829.7 3122.4 4327.1 True False 2173.805649810773 1938.4822610763777 2736.3597359004275 2605.6605939538504 2415.5018416601847 2494.064930986647 2075.751482201306 2518.9356062041356 2188.7774681023616 2417.047671399019 3252.5616481154025 0.6683364944274979 0.5959863242560128 0.841293734581765 0.8011102865532528 0.7426459827624707 0.7668002026746386 0.6381897429689108 0.7744466911683767 0.6729395795989238 0.7431212480782657 1.0 11.667360686290015 -10.7931982224182 0.8861778619236802 1.011786723760483 0.7223093733804158 0.0664149157838757 0.10227802326483368 0.30890005051541664 0.4013998634938308 0.06109429581428278 0.013026259822185448 1.6099106656202734e-11 10.7931982224182 -0.28947735038006717 ARQPS(ph)PFVDDCK ddPTM_A549_PD325901_60min_R1 1 ARQPSPFVDDCK 12 1 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 ARQPS(1)PFVDDCK 66.24600000000001 0.0015142999999999999 6631500.0 2406.2 2741.9 2836.9 3365.2 3939.8 2697.7 3381.0 2966.2 3086.3 3583.8 3931.2 True False 2650.475652649181 2972.969535698888 3029.429093665536 3573.060761076286 3663.0820395721425 2675.7308256195847 3509.6658051541904 2907.036814061114 2956.593543897358 3357.5182563848653 3447.687321930026 0.7687691502039798 0.8623083412432572 0.8786844080656515 1.036364503923771 1.0624751311617022 0.7760944006145263 1.0179768283596753 0.8431845879903477 0.8575584929326618 0.9738465072016207 1.0 11.751413223951078 ARQS(ph)LGTGTLVS ddPTM_A549_MK2206_60min_R1 1 ARQSLGTGTLVS 12 1 Q9Y5J5 Q9Y5J5 PHLDA3 Pleckstrin homology-like domain family A member 3 1 ARQS(0.998)LGT(0.002)GTLVS 76.07300000000001 0.00098653 8809700.0 4824.8 4559.5 4896.3 4774.6 6005.0 5252.9 4600.8 4915.3 6401.2 6678.4 6664.9 True False 5639.108284965328 4791.559074800902 5590.668965111315 5944.377214339941 5121.672454775399 5808.758391407185 5436.7058062801825 5612.058827474929 4951.338420615905 5169.744801649761 5009.821388117761 1.1256106451898868 0.9564331147943654 1.1159417735672577 1.1865447395866746 1.0223263581657673 1.1594741491551643 1.0852095085016207 1.120211359388091 0.988326336815008 1.0319219790771992 1.0 12.290543453537623 -8.768238065074165 24.973054196860744 0.9944874285487205 1.094706154411694 0.29617943035382865 0.060755790587917566 115.80380358750244 425371.7480984293 0.009836486139228605 0.01058694883457271 1.7051474304744387e-09 8.768238065074165 0.10021872586297353 ARQS(ph)LGTGTLVS ddPTM_A549_PD325901_60min_R1 2 ARQSLGTGTLVS 12 1 Q9Y5J5 Q9Y5J5 PHLDA3 Pleckstrin homology-like domain family A member 3 1 ARQS(0.96)LGT(0.015)GT(0.005)LVS(0.021);ARQS(0.994)LGT(0.005)GT(0.001)LVS 65.043 0.0050762 34520000.0 10354.7 10497.7 10007.4 10754.9 11973.8 10922.2 11168.6 10976.9 10448.099999999999 11324.1 12363.2 True False 11405.901521272754 11382.378020681348 10686.562343384854 11419.205746849908 11132.801595367513 10833.253224443868 11593.627184692432 10757.957118288532 10009.00269124646 10609.094393417005 10842.604776781976 1.0519521605820221 1.0497826172780202 0.9856083997702041 1.0531791928174536 1.0267644929018307 0.9991375179183757 1.069265865847907 0.9921930513713175 0.9231179128358006 0.9784636267601486 1.0 13.404423764204317 -8.517381184650896 24.597443629878168 0.9633767207365496 1.031535784254786 0.5164406581085486 0.028624782632430734 132.6720286766436 593609.658709325 0.0057082654690118785 0.006569450266565491 3.0382171811603253e-09 8.517381184650896 0.06815906351823653 ARQS(ph)PEDVYFSK ddPTM_A549_PD325901_60min_R1 2 ARQSPEDVYFSK 12 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 ARQS(0.993)PEDVY(0.007)FS(0.001)K;ARQS(0.994)PEDVY(0.006)FSK 87.669 7.802199999999999e-05 44280000.0 6150.2 5534.700000000001 5092.9 5711.0 7028.9 6807.6 6061.200000000001 6376.6 5854.200000000001 7246.7 7629.5 True False 6774.563776462059 6001.128593031337 5438.534820095603 6063.755499377943 6535.214312388605 6752.161162652589 6291.862282815906 6249.413710654072 5608.168332528885 6789.1421252704395 6691.119867385312 1.0124708435554233 0.8968795525966862 0.8127988928437503 0.9062392573378716 0.9766996320366877 1.0091227322895249 0.940330229844556 0.9339862137451371 0.8381509289446324 1.0146496042258815 1.0 12.708031974140932 -6.545432045452616 24.634932084489037 0.9339539138307941 0.8985304421511562 0.044530959628262146 0.06599265596907833 555.6705059778403 606956.0192882791 0.010848994402082915 0.022585325291375993 2.848183423781746e-07 6.545432045452616 -0.035423471679637886 ARRGS(ph)SSDEEGGPK ddPTM_A549_PD325901_60min_R1 1 ARRGSSSDEEGGPK 14 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 ARRGS(0.333)S(0.333)S(0.333)DEEGGPK 43.297 0.023466 3923000.0 456.03 349.36 284.23 364.39 459.94 808.03 497.42 430.96 329.5 703.06 519.72 True False 502.32582988845724 378.8017932790266 303.5195570138375 386.8975427102661 427.63540110686085 801.4496715814925 516.349590298668 422.3641647184202 315.65226086711556 658.6686716150294 455.7977347765246 1.1020805755753595 0.8310743217378017 0.6659084366942976 0.8488360366686775 0.9382130898841092 1.7583450079549854 1.1328480834856094 0.9266482312061145 0.6925270504511795 1.445089831212021 1.0 8.832249944490275 -5.2388915189914425 21.64284712214696 0.9225297799981347 1.1020818040613798 0.0 0.32399566713810174 3176.5081416214134 3048701.782827649 0.04168248178032935 2.238081290558135 5.7691055000919814e-06 5.2388915189914425 0.1795520240632451 ARRS(ph)EQKDPLEEPK ddPTM_A549_MK2206_60min_R1 2 ARRSEQKDPLEEPK 14 3 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 ARRS(1)EQKDPLEEPK;ARRS(1)EQKDPLEEPK 52.265 0.006539699999999999 20506700.0 3892.2999999999997 3635.1 3545.9 3212.0 5190.6 3655.7 3361.2 3752.3 4939.7 5558.4 5763.0 True False 4549.225082401456 3820.111063232539 4048.761939298701 3998.9401441921577 4427.0696159462395 4042.5437475427343 3971.886531922481 4284.200015936808 3820.865837079984 4302.753579523543 4331.888049291457 1.0501714334805001 0.8818582151164718 0.9346414065250219 0.9231402332399247 1.0219723052793 0.9332059604365701 0.916895008995475 0.9889913975587507 0.882032451809308 0.9932744176589052 1.0 12.080780243947428 ARS(ph)APPMEGAR ddPTM_A549_MK2206_60min_R1 4 ARSAPPMEGAR 11 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 ARS(1)APPMEGAR;ARS(1)APPMEGAR;ARS(1)APPMEGAR;ARS(1)APPMEGAR 116.79 5.1828e-06 98572000.0 4645.17 5035.48 4230.93 4882.45 5991.6 3891.42 3586.33 3150.2 5945.1 7318.0 7540.799999999999 True False 5429.161132497179 5291.764423725948 4830.939494017608 6078.650469181513 5110.243577024529 4303.207481484462 4237.919738792558 3596.7504970828895 4598.5443423738725 5664.858717428271 5668.211244507552 0.9578261815414854 0.9335863106467005 0.8522864243457311 1.072410714239289 0.9015619490145699 0.7591826232048484 0.7476643964000222 0.6345477156604052 0.8112866906345141 0.9994085387903408 1.0 12.468677810688735 -6.996533285235436 24.801484727267187 0.8614060236740054 0.9505108879945009 0.18764696908010448 0.11300200039501929 193.6174923094779 1385142.8272963986 0.019149661350459098 0.03606133777607772 1.0080143500802308e-07 6.996533285235436 0.08910486432049547 ARS(ph)APPMEGAR ddPTM_A549_PD325901_60min_R1 4 ARSAPPMEGAR 11 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 ARS(1)APPMEGAR;ARS(1)APPMEGAR;ARS(1)APPMEGAR;ARS(1)APPMEGAR 116.11 5.5193e-06 175547000.0 10156.300000000001 11036.9 9778.0 10770.5 12413.7 11368.5 11008.7 12598.1 12295.7 12047.3 14016.7 True False 11187.360099327112 11967.018297003917 10441.593879890586 11435.769323419747 11541.804536940124 11275.91870521417 11427.642102691785 12346.821012481745 11778.954488448544 11286.631421994914 12292.73475918207 0.9100790278559213 0.9735033360306696 0.8494117935873648 0.9302868358790372 0.9389126799729378 0.9172831697838116 0.929625695710704 1.0043998552282498 0.9582045589692921 0.9181546371172089 1.0 13.58551828668469 -8.40968759793177 0.45360128513326153 0.9930566405379049 0.912063135270523 0.14362499822369823 0.038952851560221505 0.5997092195565458 0.29495157066727623 0.012562695395113222 0.015866410959670577 3.893250984285762e-09 8.40968759793177 -0.08099350526738192 ARS(ph)DPTHQHR ddPTM_A549_MK2206_60min_R1 2 ARSDPTHQHR 10 1 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627 A0A2R8Y6L5 DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1A 1 ARS(0.986)DPT(0.014)HQHR;ARS(0.985)DPT(0.015)HQHR 75.479 0.00064982 51452000.0 1140.82 1310.4099999999999 1372.6599999999999 996.95 1663.3400000000001 933.51 983.07 795.7800000000001 2029.79 2100.3 2002.1999999999998 True False 1333.3625256288651 1377.1042717863484 1567.3238285337286 1241.2027947547856 1418.6648894131745 1032.293408586213 1161.6810939358068 908.5842519740406 1570.0458059085731 1625.8407712783003 1504.9984820911604 0.8859560600859802 0.9150203725607045 1.0414122320947252 0.8247202967475178 0.9426354287360958 0.6859099333787136 0.7718819040413103 0.6037110753172216 1.043220856759291 1.080293960841231 1.0 10.555546316576859 ARS(ph)DPTHQHR ddPTM_A549_PD325901_60min_R1 2 ARSDPTHQHR 10 1 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627 A0A2R8Y6L5 DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1A 1 ARS(0.796)DPT(0.204)HQHR;ARS(0.746)DPT(0.254)HQHR 69.229 0.0015628 72252000.0 544.0 699.0 731.52 893.21 870.14 998.3199999999999 812.0 729.28 1033.3200000000002 763.05 1010.73 True False 599.2264795283662 757.9071831407131 781.1653461871107 948.3815530729078 809.0243682200378 990.1900129119409 842.9011043434496 714.733938290908 989.893153867096 714.8708927770726 886.4166175453636 0.6760099795824281 0.8550236628454522 0.8812620733017039 1.0699049795559288 0.9126908862114544 1.1170706790830967 0.9509085092262646 0.8063182979016416 1.116735781204414 0.8064728014200254 1.0 9.791841117445182 -4.521294378582415 0.6168654834287459 1.0326500165835764 1.2453546471432938e-14 0.2745340648093506 0.11427653801269479 4.006588516649953 0.5419449237333696 0.01619968767255508 3.6255494718428514 3.0109644050987498e-05 4.521294378582415 -1.032650016583564 ARS(ph)LAIPDDDRFEDLEEANPFSFR ddPTM_A549_PD325901_60min_R1 1 ARSLAIPDDDRFEDLEEANPFSFR 24 2 Q96C92-4 Q96C92-4 1 ARS(1)LAIPDDDRFEDLEEANPFSFR 93.04299999999999 4.1234000000000004e-08 2771200.0 428.24 550.14 402.17 455.9 467.91 545.81 478.38 393.89 410.33 457.73 411.27 True False 471.7146095463742 596.5022285164978 429.4636746446717 484.05990757597704 435.04561580186834 541.3651043227284 496.5850126795805 386.0335549492728 393.0852570610123 428.8288496833097 360.6863972553319 1.3078247839006938 1.6537974069874073 1.1906844225695932 1.34205201876052 1.2061603074370923 1.5009301943247197 1.376777767219331 1.0702747813247793 1.0898255660657619 1.1889243757084065 1.0 8.494601204853835 -8.281109886531226 5.458680824814506 1.0448085418142792 1.370883239191626 0.5100525768496144 0.13021413622929837 0.0879632503159686 8.675402854281318 0.019534101842703013 0.02415235698259197 5.234679703452446e-09 8.281109886531226 0.32607469737734673 ARS(ph)LPS(ph)SPER ddPTM_A549_PD325901_60min_R1 1 ARSLPSSPER 10 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 ARS(1)LPS(0.544)S(0.456)PER 49.298 0.0085701 3380600.0 525.76 258.02 521.1 544.95 596.44 443.36 417.31 448.66 514.15 510.33 476.74 True False 579.1347681559448 279.76425092126874 556.4649796288592 578.6103238287537 554.5481120062973 439.74942315553966 433.1909604107943 439.7111243330389 492.5420635047872 478.1076767065371 418.10400230385653 1.3851452388993382 0.6691259815254063 1.330924785609799 1.3838908994902408 1.3263401186082886 1.0517704225083029 1.0360842231210532 1.051678821322259 1.178037188811297 1.1435137527314867 1.0 8.707718043432521 -7.297137699038675 24.554433702556576 1.0773131763533899 1.2039013236536786 0.11746859391413167 0.19208687866650306 936.7749412114986 644341.2457725708 0.02866768590981657 0.045829501471419384 5.045013131221129e-08 7.297137699038675 0.12658814730028878 ARS(ph)MDSSDLSDGAVTLQEYLELKK ddPTM_A549_MK2206_60min_R1 4 ARSMDSSDLSDGAVTLQEYLELKK 24 2 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 ARS(0.975)MDS(0.023)S(0.002)DLSDGAVTLQEYLELKK;ARS(0.503)MDS(0.152)S(0.152)DLS(0.193)DGAVTLQEYLELKK;ARS(0.99)MDS(0.01)SDLSDGAVTLQEYLELKK;ARS(0.514)MDS(0.188)S(0.188)DLS(0.109)DGAVT(0.002)LQEYLELKK 190.23 4.9088999999999994e-51 47307100.0 6849.4 7644.8 7433.400000000001 6771.6 11593.0 7533.6 6900.2 6251.099999999999 11466.8 11600.8 11661.199999999999 True False 8005.411268247706 8033.887666419113 8487.567895198103 8430.64230398868 9887.685057154235 8330.800551601053 8153.877022364488 7137.212568190856 8869.588108716873 8980.171222894483 8765.402207252739 0.9132965126943982 0.9165452396207957 0.9683033013790573 0.9618089512210781 1.128035522314411 0.950418515274509 0.9302342128257095 0.8142481542130864 1.0118860377425611 1.0245019008328036 1.0 13.097604576342375 -6.501523294336303 0.00833150722597771 1.9167347365968654 6.802906347773939e-08 0.05447293940043296 0.07343215113453772 10120.279582765917 19.169856537616816 2116.632914621332 2295.2975540704747 3.151205353866409e-07 6.501523294336303 -1.916734668567802 ARS(ph)MDSSDLSDGAVTLQEYLELKK ddPTM_A549_PD325901_60min_R1 4 ARSMDSSDLSDGAVTLQEYLELKK 24 2 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 ARS(1)MDSSDLSDGAVTLQEYLELKK;ARS(0.983)MDS(0.007)S(0.007)DLS(0.002)DGAVTLQEYLELKK;ARS(0.998)MDS(0.002)SDLSDGAVTLQEYLELKK;ARS(0.768)MDS(0.059)S(0.059)DLS(0.114)DGAVTLQEYLELKK 244.31 1.5160999999999998e-99 94724700.0 19962.3 18988.899999999998 20807.0 20957.899999999998 23789.800000000003 24111.1 22229.3 23669.199999999997 26685.5 22610.399999999998 24686.7 True False 21988.858000531458 20589.161244550352 22219.088142655288 22252.421884155676 22118.886518354568 23914.74719560973 23075.24817583971 23197.099237871793 25564.001236326003 21182.77548528499 21650.392401884907 1.0156332315998617 0.950983282998503 1.0262672255640444 1.0278068623928662 1.021639058903564 1.1045872403461696 1.0658120068914203 1.0714401294570637 1.1807638753974905 0.978401457677081 1.0 14.402105552821222 -6.8307674810574595 1.1759706531928402 1.0861244393934981 0.9909806691180221 0.17049455227926047 0.05507667863315548 0.5066049864543376 1.377259855748453 0.010517045703335618 0.02947968183897087 1.476496830201652e-07 6.8307674810574595 -0.09514377027547605 ARS(ph)NENLDKIDMSLDDIIK ddPTM_A549_PD325901_60min_R1 2 ARSNENLDKIDMSLDDIIK 19 2 H9KVD1;Q96QD9-4;Q96QD9 H9KVD1 FYTTD1 UAP56-interacting factor 1 ARS(0.902)NENLDKIDMS(0.098)LDDIIK;ARS(0.913)NENLDKIDMS(0.087)LDDIIK 50.387 0.0061614 1922010.0 746.74 880.6700000000001 1144.55 1180.56 1185.83 934.13 849.8199999999999 1061.9 897.19 1176.77 1083.43 True False 822.548495079067 954.8871516116344 1222.226045738267 1253.4805099537073 1102.5413916914147 926.5227549898145 882.1603651393477 1040.7195714555653 859.4842243622687 1102.4685413711752 950.1749784286344 0.8656810732265003 1.0049592688609763 1.2863168084677845 1.319210185924564 1.1603561625194114 0.9751075075898809 0.9284188545969009 1.0952925461967755 0.9045536284102673 1.1602794920935495 1.0 9.89204940560344 -7.274901964645626 11.546037623622889 0.9646158836647695 1.1400090587714735 0.10159083777587363 0.13786276292850974 0.7072092097216655 603.3707746675682 0.01957389245449773 0.031772072899673445 5.3100429682287064e-08 7.274901964645626 0.17539317510670405 ARS(ph)PAAPR ddPTM_A549_MK2206_60min_R1 1 ARSPAAPR 8 1 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 ARS(1)PAAPR 42.395 0.02219 3424800.0 0.0 160.83 261.71 114.61 186.67 101.65 192.0 0.0 132.27 301.05 343.13 True False 0.0 169.01556003952837 298.82441330377696 142.68945514503838 159.2110902802537 112.40653553019094 226.88391471174475 0.0 102.31105619178683 233.04259591169458 257.92135109376693 0.0 0.6552988316895215 1.1585873446946227 0.5532285502535377 0.6172854228821589 0.4358171010407188 0.879663175419942 0.0 0.39667540418005875 0.9035413118124226 1.0 8.010787396178692 -10.837828128744006 1.147448550730421 0.9937065574794821 0.5326367097747967 0.20790709206027824 0.32158862107449265 0.5835433690263884 1.392997034778821 0.20667190894607548 0.05370240927512812 1.4526864018623533e-11 10.837828128744006 -0.4610698477046854 ARS(ph)PGREEVAR ddPTM_A549_MK2206_60min_R1 2 ARSPGREEVAR 11 2 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 ARS(1)PGREEVAR;ARS(1)PGREEVAR 49.928999999999995 0.0056403 397868000.0 1518.02 1245.9099999999999 1283.64 1080.63 1547.94 1398.8799999999999 1020.31 1197.76 1383.15 1596.92 1702.16 True False 1774.2246639742732 1309.3214972881221 1465.6794539500224 1345.3843985113242 1320.2400765437187 1546.9085530986072 1205.6871198934396 1367.5461479861601 1069.8687334366825 1236.1746628908927 1279.4666947738938 1.3866907761032519 1.0233337863628442 1.145539356308947 1.0515196714433268 1.031867481925374 1.2090260414101481 0.9423356815915459 1.068840754958324 0.8361833393605832 0.9661640025021115 1.0 10.321326878377931 -8.04429443754999 1.5367342036861051 0.9268434058892153 1.1275269285699159 0.3423445271216622 0.11334521957219945 0.29496853240870435 1.3860729876861928 0.01956766770158462 0.027523497704582036 9.030370363653692e-09 8.04429443754999 0.20068352268070055 ARS(ph)PGREEVAR ddPTM_A549_PD325901_60min_R1 4 ARSPGREEVAR 11 2 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 ARS(1)PGREEVAR;ARS(1)PGREEVAR;ARS(1)PGREEVAR;ARS(1)PGREEVAR 77.527 0.00023286 1101763000.0 2783.64 3258.3900000000003 2958.0 2869.7299999999996 3094.4500000000003 3602.77 2908.4800000000005 2967.19 3463.6 3134.01 3742.6799999999994 True False 3066.23308359254 3532.9859606206983 3158.7476678989947 3046.9867044702974 2877.106507272963 3573.430235614587 3019.1637979813254 2908.007067734477 3318.036936993448 2936.1280737465067 3282.3540868032806 0.9341567065906582 1.0763573542614078 0.962342143584921 0.928293116431503 0.8765375188619603 1.088679082485823 0.9198166066604109 0.8859516648207251 1.0108711154392607 0.8945189934112298 1.0 11.680515163891693 ARS(ph)PINR ddPTM_A549_PD325901_60min_R1 1 ARSPINR 7 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ARS(1)PINR 76.679 0.0048993000000000005 101470000.0 1328.7 1621.0 1399.9 1339.9 1468.7 1705.7 1390.0 1325.8 1933.8 1614.0 1738.2 True False 1463.5886458627585 1757.6073588999936 1494.905632282557 1422.6625798663122 1365.543578739937 1691.8093447230335 1442.897210637186 1299.3558789300205 1852.5291109706475 1512.0917645530376 1524.4124193576445 0.9601001850138982 1.152973655016936 0.9806438292548673 0.9332530762677678 0.8957835566016633 1.109810785611368 0.9465268009592789 0.8523650571395515 1.2152414185599882 0.9919177680212035 1.0 10.574037551580473 -8.76673097213176 24.99999415230785 1.101641769398991 0.9837787535111499 0.11601674424726216 0.09968591894377608 158.70021750479071 749774.018051846 0.01897525363607842 0.02049133356226855 1.7110749285832394e-09 8.76673097213176 -0.1178630158878412 ARS(ph)PPQPLGELK ddPTM_A549_PD325901_60min_R1 2 ARSPPQPLGELK 12 1 Q96FF7;A0A044PY82 Q96FF7 LOC113230 Uncharacterized protein LOC113230 1 ARS(1)PPQPLGELK;ARS(1)PPQPLGELK 53.828 0.0061032 13077600.0 2544.5 3292.5 3348.2 2986.5 3671.7000000000003 3098.9 2881.3999999999996 3255.3 3899.8 3907.8 4563.8 True False 2802.8157668381023 3569.970530029753 3575.4289863622066 3170.9693221663842 3413.8124586773547 3073.6635858370196 2991.053253762578 3190.370487766554 3735.904967919809 3661.060841090681 4002.4815323118232 0.7002695063577727 0.8919392884663098 0.8933030564908185 0.7922508315322171 0.8529239750684234 0.7679394798010921 0.7472997013517645 0.7970981157591511 0.9333971781656066 0.9146977472688204 1.0 11.966679030738131 -8.89761679512084 2.92566294131321 0.9731364129538911 0.8089022215345246 0.5350646208287424 0.05915907802276899 0.12237346730974283 2.0084598607720285 0.010771356811653922 0.011230624804856279 1.2658527950476866e-09 8.89761679512084 -0.16423419141936646 ARS(ph)PPQPLGELKR ddPTM_A549_MK2206_60min_R1 1 ARSPPQPLGELKR 13 2 Q96FF7;A0A044PY82 Q96FF7 LOC113230 Uncharacterized protein LOC113230 1 ARS(1)PPQPLGELKR 44.457 0.01234 8401700.0 1095.9 1451.0 1144.6 950.51 1469.2 999.47 884.51 562.1 1831.6 1383.0 1885.0 True False 1280.861127817423 1524.8497022779059 1306.9214912212099 1183.384992670015 1253.082626237472 1105.233252005509 1045.2140177171107 641.7793963590539 1416.7455244641776 1070.5793394647853 1416.902476646608 0.9039867943832275 1.0761853602562523 0.9223792835159053 0.8351915619984939 0.8843817036745891 0.780034808479742 0.7376753410656923 0.4529453557579751 0.9998892286625105 0.7555772942104895 1.0 10.468524747716772 -8.917963972083525 24.961765530106156 1.0000316133842344 0.8270946912301697 0.0 0.16246485088358514 31.584906421500012 9607.945372462395 0.02653482533470043 0.028248413560800222 1.207914036290025e-09 8.917963972083525 -0.17293692215406475 ARS(ph)PPQPLGELKR ddPTM_A549_PD325901_60min_R1 2 ARSPPQPLGELKR 13 2 Q96FF7;A0A044PY82 Q96FF7 LOC113230 Uncharacterized protein LOC113230 1 ARS(1)PPQPLGELKR;ARS(1)PPQPLGELKR 100.41 3.1424e-05 24837000.0 3248.8 3579.9 4240.5 4566.5 4827.5 6059.299999999999 5050.1 5643.7 5459.4 5161.2 5019.5 True False 3578.615784359847 3881.5907366601414 4528.285830198 4848.562333726037 4488.433053970891 6009.955069754511 5242.284319020757 5531.131976103001 5229.960403574906 4835.320951184099 4402.133321232135 0.8129276246813466 0.8817521990846255 1.028657130477492 1.1014119700420495 1.0196040706723986 1.3652369501776822 1.190850875355467 1.2564662568090657 1.1880513428228172 1.0984040233090253 1.0 12.103987123432635 -5.775234752053535 1.3586715646725158 1.12772219394552 0.7854628291180937 0.5809812720356262 0.099559281820996 0.4235535074875201 1.1948911513904636 0.01743342878961036 0.15341827321060383 1.677896808353881e-06 5.775234752053535 -0.34225936482742625 ARS(ph)PPQVVK ddPTM_A549_MK2206_60min_R1 2 ARSPPQVVK 9 1 Q8IVE3;Q8IVE3-3 Q8IVE3 PLEKHH2 Pleckstrin homology domain-containing family H member 2 1 ARS(1)PPQVVK;ARS(1)PPQVVK 74.944 0.00058894 8331200.0 2564.4 2392.0 2136.4 2699.7 2954.1000000000004 2307.5 2079.3999999999996 2230.6000000000004 3892.1 3580.5 3643.2 True False 2997.2080264394576 2513.7425829419367 2439.3736448060413 3361.126621194136 2519.555803272607 2551.6781184054676 2457.2000638104287 2546.7943809260028 3010.545564406544 2771.6625632347527 2738.492892795184 1.0944735457685277 0.9179291973170526 0.8907723117426712 1.2273636459079609 0.9200519781889565 0.9317819027826527 0.8972818845998028 0.9299985359196918 1.0993439392620352 1.0121123814222182 1.0 11.419166420810006 -8.757321028557353 24.99928639171325 1.046912415249103 0.9738046665032736 0.0674469161317306 0.09883891808869466 186.90282100987417 1134541.1137932225 0.016908559867725218 0.018841579776818718 1.7485536876523915e-09 8.757321028557353 -0.07310774874582937 ARS(ph)PPQVVK ddPTM_A549_PD325901_60min_R1 2 ARSPPQVVK 9 1 Q8IVE3;Q8IVE3-3 Q8IVE3 PLEKHH2 Pleckstrin homology domain-containing family H member 2 1 ARS(1)PPQVVK;ARS(1)PPQVVK 54.471000000000004 0.0054917 15345300.0 2852.0 2697.5 2926.4 2574.41 2882.9 3294.5 2869.13 3158.6000000000004 3055.5699999999997 3279.7 3300.3 True False 3141.5329404685694 2924.8277918770746 3125.0031018727573 2733.425458790681 2680.4150494650808 3267.6706842879917 2978.3163121981775 3095.599245126237 2927.155018930903 3072.619182282897 2894.384022325411 1.0853891246762044 1.010518220566739 1.079678120722233 0.944389354593862 0.9260744354550358 1.128969293322271 1.0289983254555604 1.0695191865518816 1.0113222697308712 1.0615796516919298 1.0 11.49904063374289 -8.97788956262907 23.127267528967884 1.0049950452090253 1.0318774162382665 0.0 0.0591852638420284 179.91096993719094 188189.28103612477 0.009899571418814094 0.010174497287615396 1.0522294127421518e-09 8.97788956262907 0.02688237102924118 ARS(ph)PREEIL ddPTM_A549_PD325901_60min_R1 1 ARSPREEIL 9 2 C9J519;Q8IZA0-3;Q8IZA0 C9J519 KIAA0319L Dyslexia-associated protein KIAA0319-like protein 1 ARS(1)PREEIL 56.225 0.0052604999999999996 13653000.0 346.41 293.7 147.48 282.83 217.94 274.36 255.51 312.75 344.5 490.65 364.62 True False 381.57728818643636 318.45112974023976 157.4888796692845 300.29976674646525 202.63264625218352 272.1257031237682 265.23357287043694 306.51195590237154 330.02186303102076 459.6702752651473 319.77405151661736 1.1932715815329604 0.9958629483220941 0.4925004981559626 0.9390998591730946 0.633674450103571 0.8509936995611006 0.829440574094405 0.9585266673410596 1.0320470390446013 1.4374846022841228 1.0 8.320909063967767 -8.395573555521375 3.095216549879856 1.0148399562104247 0.8347587129738051 0.21620697081977414 0.21377482900745187 0.32830187482771794 6.004634985359113 0.02825403914185141 0.03440645539030031 4.021855329320992e-09 8.395573555521375 -0.18008124323661956 ARS(ph)PSVAAMASPQLCR ddPTM_A549_MK2206_60min_R1 3 ARSPSVAAMASPQLCR 16 1 P25325-2 P25325-2 1 ARS(0.997)PS(0.003)VAAMASPQLCR;ARS(0.976)PS(0.024)VAAMASPQLCR;ARS(1)PSVAAMASPQLCR 144.4 6.971300000000001e-15 103559000.0 7896.2 8456.1 7149.900000000001 6578.6 9954.6 8239.8 7039.1 7355.7 11457.7 11679.2 10592.6 True False 9228.885516444878 8886.479371076632 8163.863332240555 8190.357295324572 8490.291526778878 9111.730166863426 8318.013354413762 8398.393000886488 8862.549244187167 9040.860608443321 7962.165079112388 1.159092461001035 1.116088310501003 1.02533208632628 1.0286595685903088 1.0663295023927541 1.144378454393863 1.0446924010951357 1.0547876007894488 1.1130828306281677 1.1354776645061955 1.0 12.958945067715051 -10.926818556358645 1.108808487652589 0.9986471002828435 1.0832808290488312 0.0 0.058587448720035296 0.5061084359052543 1.0758398101855147 0.03393998216219113 0.007484255243250686 1.1835359212382155e-11 10.926818556358645 0.08463372876598763 ARS(ph)PSVAAMASPQLCR ddPTM_A549_PD325901_60min_R1 4 ARSPSVAAMASPQLCR 16 1 P25325-2 P25325-2 1 ARS(0.953)PS(0.047)VAAMASPQLCR;ARS(0.916)PS(0.084)VAAMASPQLCR;ARS(1)PSVAAMASPQLCR;ARS(1)PSVAAMASPQLCR 139.95 7.7485e-12 158477000.0 11671.699999999999 11641.8 12387.7 11298.499999999998 13334.1 12128.7 12222.8 14277.9 12498.4 13520.2 14243.2 True False 12856.602391748582 12622.895342900654 13228.403815291545 11996.382684244732 12397.558816147746 12029.927888457669 12687.9453425728 13993.116083704128 11973.13571235677 12666.532264628238 12491.376695083878 1.0292382261443163 1.010528755238687 1.0590028735982107 0.9603731419744986 0.9924893883815821 0.9630586109209389 1.0157363477451036 1.1202220880274372 0.9585121003571154 1.014022118924113 1.0 13.608644867041182 -2.000000000793588 0.23104396432545235 0.9864832333648137 1.2375552461115225 0.0 0.046782607661227306 104.11039506500899 1.2321654623462706 0.027246357289996904 10.049485359629614 0.009999999981726964 2.000000000793588 0.25107201274670876 ARS(ph)PTDDK ddPTM_A549_MK2206_60min_R1 2 ARSPTDDK 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.974)PT(0.026)DDK;ARS(0.974)PT(0.026)DDK 59.426 0.010423 4483400.0 2203.2 2001.71 1481.25 1111.01 795.29 614.85 442.72 539.39 814.49 2819.6 2527.4 True False 2575.046296931606 2103.5884890053117 1691.313523389322 1383.2074998751336 678.3038945142926 679.913018895602 523.1564933394981 615.8501843125958 630.0093154732626 2182.650401702753 1899.7768273085599 1.3554467345407668 1.107281896887591 0.890269582762218 0.7280894681901888 0.3570439878852797 0.35789099494325566 0.2753778685050397 0.3241697527098903 0.33162280243506576 1.1488983181224206 1.0 10.891614235299427 -5.854093631600867 1.475532068513583 0.5762077081067603 1.344504372336702 0.4807776246745816 0.275936201690233 0.387935062438958 1.413742570187245 0.045436371960740386 0.31500800521862976 1.399285611448782e-06 5.854093631600867 0.7682966642299418 ARS(ph)PTDDK ddPTM_A549_PD325901_60min_R1 4 ARSPTDDK 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.993)PT(0.007)DDK;ARS(0.972)PT(0.028)DDK;ARS(0.85)PT(0.15)DDK;ARS(0.969)PT(0.031)DDK 83.226 0.00094515 47886000.0 12962.800000000001 12951.5 11828.6 11280.0 13217.2 10457.3 8613.48 10821.19 12132.1 13302.599999999999 14658.4 True False 14278.773913291 14042.96835829321 12631.359927150123 11976.739981261282 12288.869468864648 10372.139215906765 8941.270694877114 10605.352876390667 11622.230027514219 12462.671565764082 12855.509727253522 1.1107123884026298 1.092369626427359 0.982563911905554 0.9316425591332829 0.955922381110443 0.806824422832333 0.6955205110165122 0.8249655674023917 0.9040660599303374 0.9694420392637852 1.0 13.6500991944197 -5.8810843856099835 1.684245187944162 0.9132549232501699 1.1210804882027887 0.4734029309905934 0.0849080763713123 0.37630082920150426 1.9146838644277648 0.014800170072548031 0.08586614904936395 1.3149693021947879e-06 5.8810843856099835 0.20782556495261884 ARS(ph)PTDDKVK ddPTM_A549_MK2206_60min_R1 6 ARSPTDDKVK 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.994)PT(0.006)DDKVK;ARS(0.973)PT(0.027)DDKVK;ARS(1)PTDDKVK;ARS(0.99)PT(0.01)DDKVK;ARS(1)PTDDKVK;ARS(1)PTDDKVK 114.56 1.9474e-05 1267654000.0 37156.200000000004 36833.1 33153.6 29564.800000000003 38991.0 31557.100000000006 31100.8 33816.1 42339.5 45642.1 45545.4 True False 43427.25817812731 38707.74746310981 37855.27900694697 36808.17732721431 33255.47555106538 34896.451376092395 36751.41278472413 38609.635732462935 32749.670852288193 35331.517910184855 34235.220190907385 1.2684965347370911 1.1306411130777623 1.1057407779430917 1.075155267644234 0.9713819676234412 1.0193143546762007 1.0734971932350834 1.1277753003241195 0.9566075716663933 1.03202251112054 1.0 15.063193671001217 -2.000000000011668 0.38210893990913347 0.9902306043487263 4.878014706517493 0.6353864012102701 0.05124306488893262 24.236231119373368 0.2886201685183868 0.012744129664247495 70.8505481942227 0.009999999999731335 2.000000000011668 3.8877841021687667 ARS(ph)PTDDKVK ddPTM_A549_PD325901_60min_R1 7 ARSPTDDKVK 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.997)PT(0.003)DDKVK;ARS(0.999)PT(0.001)DDKVK;ARS(0.999)PT(0.001)DDKVK;ARS(0.821)PT(0.179)DDKVK;ARS(0.999)PT(0.001)DDKVK;ARS(0.998)PT(0.002)DDKVK;ARS(0.966)PT(0.034)DDKVK 107.99 8.2605e-05 1904388200.0 32572.600000000002 30529.400000000005 36051.1 31572.0 35163.700000000004 30622.7 33521.700000000004 30960.11 32249.6 32964.9 34732.7 True False 35879.346373319226 33102.21968093861 38497.74443887538 33522.13073478559 32693.92302017943 30373.318884123815 34797.38663727809 30342.586318313548 30894.26146300494 30883.49058817497 30460.79808872582 1.1778859591534774 1.0867154427313064 1.2638455606691474 1.1005007366236026 1.0733114386874891 0.9971281381286466 1.1423662156165677 0.9961192162441724 1.0142302041140396 1.0138766061945566 1.0 14.894666121228994 -7.027187781858679 0.6300397969333347 1.0057208396871673 1.1797773045017228 0.5330891024744844 0.057082163335487 0.47246769041518477 0.33635958675949174 0.010763025440203244 0.03951508250445434 9.393170773452672e-08 7.027187781858679 0.1740564648145555 ARS(ph)PTDDKVKIEDK ddPTM_A549_MK2206_60min_R1 4 ARSPTDDKVKIEDK 14 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.996)PT(0.004)DDKVKIEDK;ARS(0.996)PT(0.004)DDKVKIEDK;ARS(0.998)PT(0.002)DDKVKIEDK;ARS(0.995)PT(0.005)DDKVKIEDK 129.46 3.1309000000000004e-09 435172000.0 32770.1 37314.7 36410.9 30553.0 46560.8 30464.5 28751.0 23688.9 50204.399999999994 51399.7 57417.7 True False 38300.89172797679 39213.85884602988 41574.51312660004 38038.48637157627 39711.76799871882 33688.233169301566 33974.684541027986 27046.874119213648 38833.183559952675 39788.47207135801 43159.3004420965 0.8874307816773384 0.9085842088344338 0.963280514297894 0.8813508555962247 0.9201207524667141 0.7805555888121604 0.7871926605161081 0.6266754521542894 0.8997639711990272 0.9218979840680951 1.0 15.397383860295271 -9.65694739039562 1.4938311699100724 0.9763391618364445 0.8500242203771247 0.17950386170446786 0.08961842533605606 0.36784211704767183 1.658246145661341 0.023937877292508465 0.01783300817826983 2.2031933375233526e-10 9.65694739039562 -0.12631494145931987 ARS(ph)PTDDKVKIEDK ddPTM_A549_PD325901_60min_R1 6 ARSPTDDKVKIEDK 14 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.995)PT(0.005)DDKVKIEDK;ARS(0.992)PT(0.008)DDKVKIEDK;ARS(0.995)PT(0.005)DDKVKIEDK;ARS(0.996)PT(0.004)DDKVKIEDK;ARS(0.999)PT(0.001)DDKVKIEDK;ARS(0.998)PT(0.002)DDKVKIEDK 128.01 3.5404000000000003e-09 681133000.0 45465.9 42458.0 48223.2 51036.3 53925.899999999994 61397.899999999994 56571.5 59290.299999999996 55558.299999999996 56566.799999999996 62080.3 True False 50081.56469777342 46036.08466636398 51495.91634165881 54188.696339152986 50138.33081825562 60897.89585880889 58724.359389612655 58107.70845415943 53223.37786019264 52995.16259424949 54444.81665944562 0.9198591853295328 0.8455549580471806 0.9458368950669392 0.9952957813799856 0.920901821230711 1.1185251341689242 1.0786033086847502 1.0672771444456381 0.9775655631849561 0.9733738828755035 1.0 15.732507085320522 -6.156482152077059 1.5803399933066968 1.007976124338068 0.8804590193890677 0.4637742742350649 0.05550838002960095 0.3139501890862751 1.4445472404406068 0.008506875818632957 0.035988955819020146 6.974576592647301e-07 6.156482152077059 -0.12751710494900037 ARS(ph)PYSPAEEDALFMDLPTGPR ddPTM_A549_MK2206_60min_R1 3 ARSPYSPAEEDALFMDLPTGPR 22 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 ARS(0.958)PY(0.013)S(0.028)PAEEDALFMDLPTGPR;ARS(0.415)PY(0.281)S(0.305)PAEEDALFMDLPTGPR;ARS(0.936)PY(0.004)S(0.06)PAEEDALFMDLPTGPR 94.721 2.7952e-07 11133000.0 2440.88 3035.1000000000004 2690.23 2378.7 3920.69 3294.5 2894.21 3395.15 4497.219999999999 3984.61 4606.76 True False 2852.8408702135175 3189.573626039746 3071.7450666853397 2961.481606783899 3343.961694706638 3643.1218032878887 3420.0504937389514 3876.422909710804 3478.6068505846188 3084.4838335681675 3462.774351892057 0.8238598823670759 0.9211035146708205 0.8870763019851238 0.8552337824628244 0.9656885938523543 1.0520817798298898 0.9876619572021026 1.1194558223502868 1.0045722005200572 0.8907550767444052 1.0 11.757712663530503 -6.921369636332466 4.157123188485314 1.0138395632824624 0.8769433517468413 0.5672883551777499 0.055807897705778216 0.09051229666977675 3.0229215400111795 0.005974766429720025 0.011567492187389795 1.1984788207089337e-07 6.921369636332466 -0.13689621153562104 ARS(ph)PYSPAEEDALFMDLPTGPR ddPTM_A549_PD325901_60min_R1 3 ARSPYSPAEEDALFMDLPTGPR 22 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 ARS(0.813)PY(0.015)S(0.172)PAEEDALFMDLPTGPR;ARS(0.928)PY(0.014)S(0.057)PAEEDALFMDLPTGPR;ARS(0.462)PY(0.259)S(0.278)PAEEDALFMDLPTGPR 100.68 2.4544e-10 11289800.0 1389.29 1954.77 2174.92 2166.69 2296.23 2002.16 2046.94 2303.04 1890.57 1728.67 2517.23 True False 1530.3296980587572 2119.5053281659116 2322.5231500564178 2300.5215203899834 2134.9507263634555 1985.855072774033 2124.8374218285458 2257.1040605000703 1811.1159175342727 1619.5214811833316 2207.626668035692 0.6932013099028279 0.9600832236964281 1.0520452500797874 1.0420790587916513 0.9670796051141644 0.8995429804899995 0.962498529572117 1.0224120288003236 0.820390487104313 0.7336029703900767 1.0 11.108280503103963 -8.731627224307301 24.99984459105255 0.9151842792121964 0.9560051115177486 0.05718687396493616 0.11386951745257222 714.4370288782234 599111.5094918588 0.018503240990604172 0.020979220662522485 1.8551232811191402e-09 8.731627224307301 0.040820832305552224 ARS(ph)RT(ph)PPSAPSQSR ddPTM_A549_MK2206_60min_R1 1 ARSRTPPSAPSQSR 14 2 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ARS(0.926)RT(0.889)PPS(0.186)APSQSR 91.54700000000001 3.195e-05 37852000.0 1158.4 1222.0 788.81 540.39 1606.0 1117.4 828.26 1046.6 1581.6 1826.5 1721.2 True False 1353.9095998391315 1284.1945804159902 900.6751192470763 672.7855742590289 1369.759527455335 1235.64252632991 978.7441208289049 1194.9587550780748 1223.370125296213 1413.8923814406571 1293.778537296627 1.0464770907918672 0.9925922740219028 0.6961586494772535 0.5200160265951127 1.0587279723448433 0.9550649440450656 0.7565005080962371 0.9236192444303196 0.9455792394365007 1.0928395708240841 1.0 10.337374969621694 -8.88311981243646 0.9027063085224549 0.9866444910736876 0.8546896678641723 0.14336076888261584 0.1563531399644915 0.865132793963702 1.4446534880111515 0.038535419398325235 0.03767777688904571 1.3088207978922157e-09 8.88311981243646 -0.13195482320951524 ARS(ph)RT(ph)PPSAPSQSR ddPTM_A549_PD325901_60min_R1 2 ARSRTPPSAPSQSR 14 2 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ARS(0.986)RT(0.994)PPS(0.02)APSQSR;ARS(0.884)RT(0.9)PPS(0.216)APSQSR 74.812 0.00044385 42582100.0 1502.18 1594.65 1254.99 1239.0 1690.8400000000001 1597.79 1157.74 1735.7600000000002 1496.5900000000001 1578.8000000000002 1640.04 True False 1654.680207753532 1729.036751924661 1340.1611682679365 1315.5302160268388 1572.081231481335 1584.778127985587 1201.7984292396363 1701.138905122622 1433.6935268319166 1479.1142985603074 1438.3254770701353 1.1504212600920556 1.2021178651765967 0.9317509768358139 0.9146262351596316 1.0929940799516809 1.1018216344285128 0.835553877337761 1.1827218054899764 0.996779623032435 1.0283585475891444 1.0 10.490174463236533 -5.751806347632818 24.998303014801227 1.0041359438696842 1.1762696367722014 0.32763086614239867 0.09194707713948434 152.98177084075863 396988.52426098724 0.01141862319641835 0.04310690542384079 1.770898427766996e-06 5.751806347632818 0.17213369290251723 ARS(ph)RTPPSAPSQSR ddPTM_A549_MK2206_60min_R1 1 ARSRTPPSAPSQSR 14 2 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ARS(0.5)RT(0.5)PPSAPSQSR 48.623000000000005 0.034678 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ARS(ph)VDALDDLTPPSTAESGSR ddPTM_A549_MK2206_60min_R1 2 ARSVDALDDLTPPSTAESGSR 21 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 ARS(1)VDALDDLTPPSTAESGSR;ARS(1)VDALDDLTPPSTAESGSR 67.33 0.00031145 25988000.0 1178.19 1461.21 1530.6999999999998 1365.71 1395.28 1360.44 976.88 1424.62 1701.14 1774.13 1751.85 True False 1377.0396680200847 1535.5793476674696 1747.7762769633998 1700.3090113090525 1190.0361603162398 1504.4008578130154 1154.366451060465 1626.564247715772 1315.834506162367 1373.352800813202 1316.8172963996599 1.0457332780979414 1.1661293877791035 1.3272731773360167 1.2912262133538996 0.903721544036477 1.1424522307887601 0.8766337245240053 1.235223938934428 0.999253662417725 1.0429334460962179 1.0 10.362839475462978 -6.755819581737682 24.999951801574365 1.0137494246133847 1.2131777726943562 0.3518689363949201 0.1156537600760312 100.90795670481681 448889.24118821527 0.015427245655463459 0.031424063976984856 1.7546092649787152e-07 6.755819581737682 0.19942834808097154 ARS(ph)VDALDDLTPPSTAESGSR ddPTM_A549_PD325901_60min_R1 2 ARSVDALDDLTPPSTAESGSR 21 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 ARS(1)VDALDDLTPPSTAESGSR;ARS(1)VDALDDLTPPSTAESGSR 89.024 8.5442e-07 32561000.0 6249.9 5833.2 5715.5 5427.5 7730.8 5414.5 5822.0 6564.700000000001 6790.1 6381.5 6202.9 True False 6884.3852470667925 6324.784235617181 6103.388200093544 5762.744348253157 7187.81527781215 5370.4061071717515 6043.559395920641 6433.761908592477 6504.735710208804 5978.571000926396 5439.98262342281 1.2655160362874782 1.1626478747164928 1.1219499440704688 1.0593313889350746 1.3212937936352473 0.9872101583649395 1.1109519669969208 1.182680599178897 1.195727295561848 1.0990055326986887 1.0 12.40938632783958 -10.848888898723045 1.0233965907327696 0.9973089802010597 1.1547762712297507 0.1402099603083543 0.09113531746085285 0.5373052527220937 0.9709653416136612 0.06275897276854496 0.014312456921142643 1.4161560148574442e-11 10.848888898723045 0.15746729102869095 ARS(ph)VS(ph)PPPK ddPTM_A549_MK2206_60min_R1 2 ARSVSPPPK 9 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 ARS(1)VS(1)PPPK;ARS(1)VS(1)PPPK 62.088 0.0021357 158081000.0 13950.6 14205.5 14106.5 12177.3 16635.8 13736.2 13515.8 13910.1 18512.8 19666.1 19676.9 True False 16305.120220576455 14928.499273403713 16107.013817850777 15160.739046659777 14188.695857311002 15189.7555666484 15971.445908651049 15881.899272894649 14319.680358866795 15223.514351300359 14790.582675187074 1.1023987748589645 1.0093246223793475 1.0890046843706955 1.02502649013914 0.9593060779893542 1.0269883141338971 1.0798388582381553 1.0737845574899754 0.9681620172334203 1.0292707654337092 1.0 13.852391268094912 -8.770069372977801 24.999882419141045 0.9849653949356487 1.042883540389898 0.17510419190908744 0.04171775471186528 170.5295114988427 493998.36801433173 0.00701133802520908 0.007522471142783898 1.697972401467047e-09 8.770069372977801 0.057918145454249226 ARS(ph)VS(ph)PPPK ddPTM_A549_PD325901_60min_R1 3 ARSVSPPPK 9 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 ARS(1)VS(1)PPPK;ARS(1)VS(1)PPPK;ARS(1)VS(1)PPPK 76.682 0.0028783000000000003 363563000.0 29531.9 28499.800000000003 26375.6 29117.9 33194.5 30696.8 29707.7 30251.0 29938.6 33372.2 33643.5 True False 32529.956747764274 30901.578166056795 28165.606825367388 30916.446551451074 30863.032834808226 30446.81543829162 30838.24278017719 29647.620073549573 28680.384756285956 31265.073596664723 29505.56278371816 1.102502500501873 1.0473136334518245 0.9545863277317256 1.0478175514927468 1.046007258395327 1.031900854136321 1.0451670759926814 1.0048145934674326 0.9720331371585443 1.0596331893698872 1.0 14.848699355851325 -8.441691701138248 4.08618382210603 0.9868022282668752 1.0365238782854127 0.032225473683874406 0.039565761641110024 0.20878968986901944 6.490916513202677 0.0055844124585992805 0.006720815318794055 3.616665129350656e-09 8.441691701138248 0.049721650018537455 ARS(ph)VS(ph)PPPKR ddPTM_A549_MK2206_60min_R1 8 ARSVSPPPKR 10 2 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR 78.529 0.00041895 1058044500.0 42041.51 43924.490000000005 40268.58 34418.840000000004 50693.55 38434.920000000006 33415.170000000006 35766.100000000006 53524.39 59163.600000000006 59620.52 True False 49137.089071765186 46160.05892433416 45979.270158099454 42851.45734512045 43236.595948339644 42502.07772336494 39486.27385603362 40836.05420408747 41401.2011258873 45798.50166909525 44815.099441357335 1.0964404784165074 1.0300113019884463 1.0259771981152355 0.9561834711801454 0.9647774184885334 0.9483874464895679 0.8810930768479778 0.9112119511755936 0.9238225875201442 1.0219435467062778 1.0 15.451697277434072 -5.755890883493907 1.1015540795846321 0.9511144110954383 1.1039296594514663 0.5979862917087365 0.03812159071958452 0.49319483381490037 0.7892904187748243 0.006184703891219642 0.07105389246249091 1.7543212197514583e-06 5.755890883493907 0.152815248356028 ARS(ph)VS(ph)PPPKR ddPTM_A549_PD325901_60min_R1 7 ARSVSPPPKR 10 2 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR 86.803 0.00023341 2324088500.0 31153.030000000002 32451.070000000003 35022.670000000006 33522.64 39703.74 33513.5 36399.10999999999 35077.17 36233.600000000006 39252.770000000004 41532.53 True False 34315.66267195143 35185.83555594007 37399.51899462341 35593.257337360694 36915.086272867164 33240.577167365496 37784.298049407225 34377.528326842476 34710.82779773814 36774.34340328035 36424.29210639969 0.9421092542227395 0.9659991593840194 1.026774079380183 0.9771846006886985 1.0134743638952215 0.9125936358698699 1.0373378826151183 0.9438077266243534 0.9529581987851317 1.0096103802335572 1.0 15.152613313829336 ARS(ph)VSPPPK ddPTM_A549_MK2206_60min_R1 2 ARSVSPPPK 9 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 ARS(0.962)VS(0.038)PPPK;ARS(0.905)VS(0.095)PPPK 64.12100000000001 0.0017894000000000002 16956300.0 3635.0 3797.8 3569.0 3688.3 4451.1 3364.3 3487.3 3562.8 5004.6 5611.799999999999 5226.299999999999 True False 4248.49913278249 3991.0917982846527 4075.137866650797 4591.933665574082 3796.349086336514 3720.3079929583996 4120.897269657646 4067.8378106173927 3871.0660907039883 4344.090482435632 3928.4654714579124 1.0814653109845989 1.0159416767900211 1.0373357984837912 1.1688873680923422 0.9663694676505918 0.9470130309119753 1.0489839606833349 1.0354775522839856 0.9853888544595958 1.105798310815616 1.0 11.939750164818385 ARS(ph)VSPPPK ddPTM_A549_PD325901_60min_R1 2 ARSVSPPPK 9 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 ARS(0.972)VS(0.028)PPPK;ARS(0.988)VS(0.012)PPPK 77.597 0.00052982 27258000.0 7725.4 8466.5 7605.5 7331.8 8281.5 7589.9 8112.8 8514.5 9133.6 8991.3 9205.3 True False 8509.676920861102 9180.001668184328 8121.654965586812 7784.66863427407 7699.836009624012 7528.090370823329 8421.537043494502 8344.671618003971 8749.74655494958 8423.587783535144 8073.106457204536 1.054077134492258 1.1371089576047875 1.0060136093385652 0.9642717676944468 0.9537637154224056 0.93248991707587 1.0431594192566385 1.0336382484535538 1.0838140932900993 1.0434134404381394 1.0 12.97890820079715 -5.774510354665103 24.975447642822008 1.0205997763349801 1.0955930531784552 0.3119428932260284 0.04736987966616175 229.16990035133765 437890.5185211984 0.0077990112272963074 0.02446378715045117 1.6806978531966463e-06 5.774510354665103 0.07499327684347512 ARS(ph)VSPPPKR ddPTM_A549_MK2206_60min_R1 4 ARSVSPPPKR 10 2 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 ARS(0.998)VS(0.002)PPPKR;ARS(1)VSPPPKR;ARS(1)VSPPPKR;ARS(0.972)VS(0.028)PPPKR 100.73 9.116799999999999e-05 68941200.0 11015.6 11818.0 11009.5 8491.91 11081.899999999998 8553.1 8097.820000000001 9431.830000000002 11844.1 15383.7 15505.199999999999 True False 12874.763974437099 12419.48572124073 12570.812648610798 10572.42833121633 9451.767190104163 9458.183364911722 9569.089074120115 10768.820786267952 9161.430261141175 11908.511485556335 11654.830918249856 1.104671879390116 1.0656083995001189 1.0785924512149414 0.9071284178530095 0.8109742008615501 0.8115247171970134 0.8210405746115323 0.9239791518043788 0.786062906051742 1.0217661302069385 1.0 13.508640454357554 -6.2889142539678105 4.355726506938865 0.8803257308831729 1.083301222651821 0.5917447326605945 0.07328811150402416 0.12447226057347938 5.727624069118938 0.012024960731355335 0.03033238726001804 5.141451531139119e-07 6.2889142539678105 0.20297549176864815 ARS(ph)VSPPPKR ddPTM_A549_PD325901_60min_R1 3 ARSVSPPPKR 10 2 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 ARS(0.998)VS(0.002)PPPKR;ARS(0.978)VS(0.022)PPPKR;ARS(0.717)VS(0.283)PPPKR 112.44 2.7541999999999998e-05 129380000.0 12027.7 11613.399999999998 11756.699999999999 11057.5 13497.5 11988.9 11708.6 12403.900000000001 12264.400000000001 13585.8 13294.599999999999 True False 13248.743249675244 12592.101975230848 12554.580360780294 11740.49666159545 12549.482163847151 11891.266373307128 12154.177180191768 12156.494483828694 11748.969918599854 12727.990269432867 11659.448481413028 1.1363096008182376 1.0799912187359988 1.0767730892927092 1.00695128764552 1.0763358304514123 1.0198824062959455 1.042431569517839 1.0426303185101795 1.0076780164455923 1.091645997640734 1.0 13.50921192692588 -2.0000000000003237 0.2506506591753896 0.9999463581836837 1.7935185971546677 0.3017937363685793 0.03433339093207629 15.063241924861265 0.18304632543786764 0.00943405230359792 5.1258415608478245 0.009999999999992546 2.0000000000003237 0.793572238970984 ARSDEGQLS(ph)PATR ddPTM_A549_MK2206_60min_R1 4 ARSDEGQLSPATR 13 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 ARSDEGQLS(0.988)PAT(0.012)R;ARSDEGQLS(1)PATR;ARSDEGQLS(0.825)PAT(0.174)R;ARS(0.001)DEGQLS(0.995)PAT(0.004)R 124.68 1.0851e-06 153161500.0 2137.7799999999997 2530.0699999999997 2584.2599999999998 2287.88 3368.1099999999997 1965.54 1823.35 2198.1800000000003 3666.42 4231.14 4026.3600000000006 True False 2498.5850002970433 2658.839756197286 2950.746927226388 2848.410702706837 2872.665480708339 2173.532138180142 2154.6290931753115 2509.7787466439163 2835.9817240696398 3275.322535345648 3026.5036901171525 0.8255681327784292 0.8785185905702185 0.9749688846776751 0.9411555360094666 0.9491696607173612 0.7181660294278401 0.7119201936581508 0.8292667062787442 0.9370488241366929 1.0822132964981992 1.0 11.563436394742238 -8.99789737365037 2.7784215841828583 0.9754659503988776 0.8557858055757087 0.3647897736061634 0.08780256652107764 0.2616088479463945 4.065585145872815 0.0172406275078871 0.017400338978937665 1.0048532149710154e-09 8.99789737365037 -0.11968014482316891 ARSDEGQLS(ph)PATR ddPTM_A549_PD325901_60min_R1 3 ARSDEGQLSPATR 13 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 ARSDEGQLS(0.791)PAT(0.209)R;ARSDEGQLS(0.987)PAT(0.013)R;ARSDEGQLS(1)PATR 113.76 1.749e-05 173702100.0 2547.76 2260.5299999999997 2642.5899999999997 3015.73 3083.26 2902.25 2540.7299999999996 2739.16 2602.8500000000004 3403.36 3502.3599999999997 True False 2806.4067196382202 2451.032796430725 2821.9320485845856 3202.0047928802383 2866.7024542695576 2878.6150382379215 2637.4188704908015 2684.5253049705493 2493.461266154696 3188.4712687789474 3071.5919232892857 0.9136652230264085 0.7979682385041498 0.9187197124683978 1.042457745966234 0.9332953484262593 0.9371736578716126 0.858648849312789 0.8739850123371086 0.811781424234413 1.0380517166370522 1.0 11.584770844030716 -8.899858724043396 0.00673786909354595 1.8184989309180801 1.5454553348423927e-06 0.06748585929975537 0.07610747574523692 6972.074680200694 34.724288973297156 4705.382220537133 4663.908732941421 1.2593350067364166e-09 8.899858724043396 -1.8184973854627453 ARSDPT(ph)HQHR ddPTM_A549_PD325901_60min_R1 1 ARSDPTHQHR 10 1 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627 A0A2R8Y6L5 DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1A 1 ARS(0.233)DPT(0.767)HQHR 54.608000000000004 0.010598 3675400.0 303.22 352.96 364.8 209.49 330.76 325.02 211.75 303.76 274.71 519.29 392.77 True False 334.00267118123406 382.70517791322754 389.55752172060625 222.4297215136903 307.5285586600544 322.3731448800376 219.80826212404602 297.70126850488975 263.1648940297581 486.5019407774141 344.4617799741695 0.96963637360952 1.1110236321194353 1.1309165323067727 0.645731208641986 0.8927799150405463 0.9358749319132351 0.6381209031101477 0.8642505085098666 0.7639886609466291 1.41235390705435 1.0 8.428200106229234 -6.23025876804178 24.99843680355176 0.8573766697149481 1.0745753581327744 0.11182374768343484 0.20291221117879343 573.9315617797513 460137.6890225528 0.01785212372148521 0.04722703514620905 5.884929059445733e-07 6.23025876804178 0.2171986884178263 ARSMDSSDLSDGAVTLQEYLELKK ddPTM_A549_MK2206_60min_R1 1 ARSMDSSDLSDGAVTLQEYLELKK 24 2 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 0 50.028999999999996 0.0030538 1343900.0 950.73 1224.6 1299.8 1190.6 1637.6 1146.6 1057.0 1015.3 1867.7 1545.7 1464.3 False True 1111.1899808831633 1286.926909310492 1484.13118494612 1482.2970534480644 1396.7112093156031 1267.932450948519 1249.043217970386 1159.2218842258446 1444.6689321040321 1196.5252964647275 1100.6738973759298 1.0095542226742222 1.1692172517024344 1.3483841022162646 1.3467177308210418 1.268960054967637 1.1519601345787733 1.1347986183266245 1.0531928548405634 1.3125312915552976 1.0870842847434767 1.0 10.104171381788223 -7.328993693650953 6.563642113744028 1.1421257958847868 1.2383704663021702 0.16282098899402475 0.11370323209413587 0.4734224411570474 38.0475894631036 0.02132905726297239 0.03427041280371447 4.688201897894202e-08 7.328993693650953 0.09624467041738338 ART(ph)ESRDVDSRPEIQR ddPTM_A549_PD325901_60min_R1 1 ARTESRDVDSRPEIQR 16 3 Q8IZR5-3;Q8IZR5-2;J3QRP2;Q8IZR5 Q8IZR5-3 CMTM4 CKLF-like MARVEL transmembrane domain-containing protein 4 1 ART(0.848)ES(0.147)RDVDS(0.005)RPEIQR 70.249 0.0006479 45155000.0 1218.8 2105.8 1938.3 1710.8 2106.4 1551.1 1941.8 1725.3 1454.7 1847.6 2234.3 True False 1342.5316787668621 2283.2631563057425 2069.8446939447667 1816.472230491294 1958.4537306855073 1538.468355865566 2015.696261593732 1690.8875380283325 1393.5640178555182 1730.9422206866102 1959.4952643946524 0.6851415786307659 1.165230249745519 1.0563152315574513 0.9270102681531397 0.999468468371386 0.7851350211559943 1.028681364135086 0.8629199410444602 0.7111851930328764 0.883361267638149 1.0 10.93626637097674 -7.236811221356287 23.635707172600622 0.8692321561211339 0.9804474141840005 0.0875637661131361 0.1365611508009493 704.5643684028032 676171.1522269663 0.022067938788296458 0.03820809517972548 5.796806165982164e-08 7.236811221356287 0.11121525806286658 ART(ph)PART(ph)PDR ddPTM_A549_MK2206_60min_R1 1 ARTPARTPDR 10 2 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 2 ART(1)PART(1)PDR 48.625 0.014837999999999999 6476800.0 842.71 1116.9 722.5 645.64 1051.1 616.88 566.48 595.07 887.55 1334.5 1250.9 True False 984.9388457186067 1173.7454393343858 824.961364151079 803.8218289838806 896.4845823837508 682.157832148197 669.4020833641107 679.4229948254443 686.521342126109 1033.0355231494984 940.2670069163086 1.047509737631658 1.248310778428556 0.8773692558421411 0.8548867747897351 0.9534361790741268 0.725493745000578 0.7119276529328366 0.7225851697739284 0.7301344586976611 1.0986618859864419 1.0 9.876926685772478 -5.834785018148544 6.642673496632285 0.8432924253888908 1.14647925339362 0.4396153823358372 0.12840643815856556 0.12769153782391668 9.150232145601493 0.01786300335746938 0.056953644913460715 1.4629011518126337e-06 5.834785018148544 0.30318682800472907 ART(ph)PATK ddPTM_A549_MK2206_60min_R1 2 ARTPATK 7 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ART(0.999)PAT(0.001)K;ART(0.993)PAT(0.007)K 67.704 0.009234899999999999 61585000.0 10278.7 8449.6 8381.0 6217.700000000001 11034.9 9980.9 9315.400000000001 10639.7 10890.900000000001 12949.3 14071.5 True False 12013.493269912358 8879.648548840381 9569.551824152513 7741.036779123161 9411.68082784364 11037.072213214778 11007.887599509313 12147.910057714698 8424.128539193554 10024.04413632057 10577.158196356893 1.135795933736737 0.8395117463496776 0.9047375151719456 0.7318635719932238 0.8898118618557979 1.0434818131978298 1.0407226019651268 1.148504147541144 0.7964453573262325 0.9477067422299845 1.0 13.368664444928099 -5.247058200755156 23.74386091648301 0.9201724659121958 1.1357962359003086 0.19152527495224925 0.11577339200250947 1612.6825222840012 2662507.758969183 0.01736486664574372 0.48018003522642017 5.661634111547674e-06 5.247058200755156 0.21562376998811283 ART(ph)PATK ddPTM_A549_PD325901_60min_R1 2 ARTPATK 7 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ART(0.987)PAT(0.013)K;ART(0.998)PAT(0.002)K 53.327 0.017884999999999998 63572000.0 6769.9 6616.200000000001 7002.5 6090.1 6426.1 5107.9 4204.4 5364.9 5843.9 7870.4 8404.2 True False 7457.175264263032 7173.770393555919 7477.731759453251 6466.271645379377 5974.752904841504 5066.30295591885 4364.40074273596 5257.892860817368 5598.30120570967 7373.461600829137 7370.536678613226 1.0117547187440503 0.9733036692391402 1.01454372802337 0.8773135427359426 0.8106265751554009 0.6873723280720556 0.5921415133039032 0.7133663517439609 0.7595513664498846 1.0003968397883967 1.0 12.847553956273414 -6.396655405307324 3.5609479732257654 0.8286605749635145 0.9973333580987723 0.3420809250776635 0.11853200082380035 0.30601580916498855 7.026431234156165 0.020772753619389763 0.05128623735544343 4.0118491499437764e-07 6.396655405307324 0.1686727831352578 ART(ph)PLTAAQQK ddPTM_A549_MK2206_60min_R1 2 ARTPLTAAQQK 11 1 I3L2J0 I3L2J0 CIC 1 ART(1)PLTAAQQK;ART(1)PLTAAQQK 132.51 2.9493e-08 83412000.0 8549.7 9125.4 8818.5 7866.700000000001 11533.0 7804.0 8238.4 9092.6 12251.5 12608.7 13411.3 True False 9992.680339903847 9589.843882265193 10069.095902790707 9794.041853149582 9836.510977672711 8629.814100124056 9735.210640423113 10381.503894919648 9476.554811625281 9760.385912877544 10080.904076949946 0.9912484300641424 0.9512880798253437 0.9988286592086281 0.9715439982752859 0.9757568272238557 0.8560555714299657 0.9657080918647699 1.0298187360652529 0.9400500926591977 0.9682054147499262 1.0 13.299337408153548 -11.05714160777239 1.3190806517613758 1.0003132584294074 0.9615081609713356 0.00756739588303168 0.042485394000480396 0.8879915155776813 2.718407497683336 0.031109037319819392 0.006670966862575282 8.767149094107467e-12 11.05714160777239 -0.03880509745807181 ART(ph)PLTAAQQK ddPTM_A549_PD325901_60min_R1 3 ARTPLTAAQQK 11 1 I3L2J0 I3L2J0 CIC 1 ART(1)PLTAAQQK;ART(0.999)PLT(0.001)AAQQK;ART(0.999)PLT(0.001)AAQQK 135.14 1.9865e-08 143394400.0 16299.900000000001 15755.800000000001 17353.5 17139.6 20319.2 18656.699999999997 17643.6 17197.3 18687.699999999997 18619.1 19420.7 True False 17954.653848647828 17083.596560984915 18531.212865072757 18198.27416514415 18892.049489434565 18504.766020809162 18315.036852948382 16854.28636047913 17902.320957227294 17443.486848444514 17032.07701796054 1.0541670184860261 1.003024853807909 1.0880183811716775 1.0684706360800178 1.1092040899951698 1.0864656143402625 1.0753260940303961 0.9895614224093794 1.051094410760888 1.0241550005938875 1.0 14.055966758241544 -10.001210889312365 0.4481805613489576 0.9962023389614578 1.065520136698961 0.2543407585347799 0.03324950685946428 1.1796101266843624 0.44707262586252605 0.03492235295012585 0.01069658305965163 9.972157076719004e-11 10.001210889312365 0.06931779773750324 ARTDEVPAGGS(ph)RS(ph)EAEDEDDEDYVPYVPLR ddPTM_A549_PD325901_60min_R1 1 ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR 30 2 D6RD33;D6RGI7;A0A499FJW5;Q9UJV9 D6RD33 DDX41 Probable ATP-dependent RNA helicase DDX41 2 ART(0.001)DEVPAGGS(0.999)RS(1)EAEDEDDEDYVPYVPLR 114.2 5.6393999999999996e-21 12479000.0 945.79 933.56 1053.8 1132.8 1248.8 1019.5 1603.3 1179.4 1462.1 1348.8 1473.0 True False 1041.805904546201 1012.234377529105 1125.317205014185 1202.7704832245377 1161.0885961261213 1011.1975300141474 1664.3144588594246 1155.8759417785989 1400.6530215897117 1263.6365378123512 1291.8303381163319 0.8064572210506363 0.7835660362374547 0.8711029396128395 0.9310591706480157 0.8987934110752885 0.7827634172832741 1.288338266839457 0.8947583190096206 1.084239145236408 0.9781753071807471 1.0 10.335200891512123 -7.708970637620763 24.999999170263564 1.0445548581884274 0.8502611661341448 0.5058546892773356 0.10003509081174652 61.250074895224124 29183.8627430362 0.01409806047659282 0.020910791343429425 1.9544715919146804e-08 7.708970637620763 -0.1942936920542826 ARTDEVPAGGS(ph)RSEAEDEDDEDYVPYVPLR ddPTM_A549_MK2206_60min_R1 4 ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR 30 2 D6RD33;D6RGI7;A0A499FJW5;Q9UJV9 D6RD33 DDX41 Probable ATP-dependent RNA helicase DDX41 1 ARTDEVPAGGS(0.5)RS(0.5)EAEDEDDEDYVPYVPLR;ARTDEVPAGGS(0.574)RS(0.426)EAEDEDDEDYVPYVPLR;ARTDEVPAGGS(0.5)RS(0.5)EAEDEDDEDYVPYVPLR;ARTDEVPAGGS(0.5)RS(0.5)EAEDEDDEDYVPYVPLR 181.44 3.933299999999999e-67 88605700.0 5486.06 6554.8 5342.4 5057.45 7660.900000000001 5959.700000000001 5099.81 6298.639999999999 10170.6 9369.699999999999 8903.3 True False 6411.972806710513 6888.411322185539 6100.032653066743 6296.525477037556 6533.991758332861 6590.351498271315 6026.37946399012 7191.491508776 7866.975339110816 7253.078262460731 6692.364891420552 0.958102690265814 1.0292940438762257 0.9114913415565303 0.9408520872957102 0.9763352513413125 0.9847567496984487 0.9004857866784566 1.0745815007778963 1.175515003552195 1.0837840404905297 1.0 12.708300393022707 -8.337507304606664 7.664046474273725 1.0848302564596255 0.9595828441834656 0.5962093331695903 0.04993082893896091 0.21399812841778199 19.40783762541688 0.011348480429116894 0.013729395054041577 4.5971925622773884e-09 8.337507304606664 -0.12524741227615988 ARTES(ph)RDVDSRPEIQR ddPTM_A549_MK2206_60min_R1 2 ARTESRDVDSRPEIQR 16 3 Q8IZR5-3;Q8IZR5-2;J3QRP2;Q8IZR5 Q8IZR5-3 CMTM4 CKLF-like MARVEL transmembrane domain-containing protein 4 1 ART(0.075)ES(0.925)RDVDSRPEIQR;ART(0.167)ES(0.826)RDVDS(0.008)RPEIQR 109.22 1.6840999999999998e-07 53539000.0 1891.75 1880.48 2359.0 2055.8 2942.1000000000004 2180.1 2526.7 2565.0 3903.3 4283.4 4676.5 True False 2211.031151153033 1976.1883998205083 2693.5416720171547 2559.4710922883705 2509.320987376302 2410.796734966741 2985.7686838654467 2928.596604983053 3019.2087822892695 3315.776965049501 3515.1959851659713 0.6289922839248573 0.5621844153668722 0.7662564714410875 0.7281161855809084 0.7138495258772388 0.6858214293428406 0.8493889662099374 0.833124701251836 0.8589019773094434 0.9432694447313854 1.0 11.77938941178203 -5.125531953343904 0.09094589351841141 1.234204240012817 1.0787956660932797e-09 0.8340256621453878 0.05142740859467713 14.180990241962482 0.1875773224270428 0.603376330327122 2.435179082248258 7.489762503361555e-06 5.125531953343904 -1.2342042389340213 ARTES(ph)RDVDSRPEIQR ddPTM_A549_PD325901_60min_R1 1 ARTESRDVDSRPEIQR 16 3 Q8IZR5-3;Q8IZR5-2;J3QRP2;Q8IZR5 Q8IZR5-3 CMTM4 CKLF-like MARVEL transmembrane domain-containing protein 4 1 ART(0.218)ES(0.782)RDVDSRPEIQR 88.036 3.7637e-06 37845000.0 1598.8 1482.5 1377.9 1929.8 2152.5 2273.2 1546.4 1980.5 2169.5 1906.6 2192.1 True False 1761.1089990256464 1607.4354778342017 1471.4125799858102 2048.9993631062084 2001.3158257218745 2254.687812877058 1605.2490982225495 1940.9973738278052 2078.3234596394764 1786.2169506176083 1922.4855968668107 0.9160583579381977 0.8361235477935102 0.7653698848947732 1.0658073935355274 1.0410043274100664 1.1727982860062292 0.8349862806976133 1.009629084863452 1.081060613939914 0.9291185086269111 1.0 10.908757074315163 -6.26899790868205 24.823760716438365 1.0337533085156938 0.8388778899390869 0.43561940308544467 0.08852191066548311 296.4652694527449 973653.9536906792 0.011428690608245138 0.027043159041058064 5.382723745270443e-07 6.26899790868205 -0.19487541857660695 ARVS(ph)GDDFSVPSK ddPTM_A549_MK2206_60min_R1 2 ARVSGDDFSVPSK 13 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 ARVS(1)GDDFSVPSK;ARVS(1)GDDFSVPSK 92.977 4.937e-05 9638600.0 3325.5 3280.1 3354.7 2602.6000000000004 4440.9 2830.6 2305.5 2600.3 4319.700000000001 4666.7 4846.9 True False 3886.7630993309976 3447.043079560136 3830.4469042458436 3240.237116835154 3787.649492824659 3130.132213199788 2724.379507124623 2968.9004880847665 3341.294847143431 3612.4892288360907 3643.280962365219 1.0668304584469133 0.9461370438260998 1.0513729091481094 0.8893733835810432 1.0396259668004622 0.8591520241051367 0.7477818854124155 0.8148974835466315 0.9171114941885409 0.9915483505534698 1.0 11.83102254171944 -6.260566779790804 24.99868424805471 0.9289635086130783 1.0139158281296328 0.2290061095426058 0.08656343649249705 121.75421926830111 3487985.9010305903 0.01337758470668742 0.033337346861901214 5.488241585401698e-07 6.260566779790804 0.08495231951655446 ARVS(ph)GDDFSVPSK ddPTM_A549_PD325901_60min_R1 1 ARVSGDDFSVPSK 13 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 ARVS(1)GDDFSVPSK 86.367 2.2793e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ARVS(ph)SGYVPPPVATPFSSK ddPTM_A549_MK2206_60min_R1 2 ARVSSGYVPPPVATPFSSK 19 1 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 ARVS(0.785)S(0.215)GYVPPPVATPFSSK;ARVS(0.73)S(0.268)GY(0.002)VPPPVATPFSSK 108.32 2.8766e-10 25268000.0 3916.3999999999996 4299.0 5263.8 4428.6 6831.2 5229.0 4834.799999999999 4531.799999999999 7129.6 6529.099999999999 7648.1 True False 4577.392573213026 4517.800737486368 6010.285991167403 5513.607198807405 5826.339529235921 5782.329309270718 5713.220577335121 5174.196528055435 5514.756983631691 5054.171775343113 5748.865693178206 0.7962253455746428 0.7858595031794429 1.0454733702162162 0.959077406409065 1.0134763691121969 1.005820907615257 0.9937996262662071 0.9000378168853914 0.9592774084417528 0.8791598282319519 1.0 12.489061611108559 -5.750363074402279 24.99999049911035 0.9815376990162976 0.7910422963648407 0.6868713786421939 0.04706467718249036 64.11901003039479 144718.16724310615 0.004903028034719726 0.018631960455546506 1.7767933724490289e-06 5.750363074402279 -0.19049540265145692 ARVS(ph)SGYVPPPVATPFSSK ddPTM_A549_PD325901_60min_R1 2 ARVSSGYVPPPVATPFSSK 19 1 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 ARVS(0.759)S(0.241)GYVPPPVATPFSSK;ARVS(0.911)S(0.089)GYVPPPVATPFSSK 146.34 2.6739e-21 43894000.0 7816.0 7878.200000000001 7392.0 8193.9 10785.3 10134.0 8643.6 10461.1 9721.400000000001 9741.5 9378.3 True False 8609.474566164907 8542.123562545305 7893.665571707023 8700.018593302908 10027.777735265097 10051.47206391699 8972.536927959412 10252.445153925813 9312.843365079145 9126.42002750521 8224.82855394189 1.046766447434174 1.0385777048752396 0.9597361841571578 1.0577750692606565 1.2192081171660547 1.2220889466564806 1.0909086881402739 1.2465238742286189 1.1322841934031325 1.109618269566387 1.0 13.005769890931761 -6.524175596066397 24.99729686523076 1.1028483149045756 1.01594415315874 0.28014260714489614 0.07666625383744041 64.24826851566853 1238416.1734697775 0.013641608022454475 0.028576890118178468 2.991055034106156e-07 6.524175596066397 -0.08690416174583548 ARVT(ph)PTLPK ddPTM_A549_MK2206_60min_R1 2 ARVTPTLPK 9 1 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 ARVT(0.999)PT(0.001)LPK;ARVT(0.987)PT(0.013)LPK 75.788 0.00080968 30846000.0 2839.5 3623.0 3302.7 2755.6 3779.2 3410.6 2767.9 3160.5 4945.8 4160.1 4449.1 True False 3318.7381808902037 3807.39522491582 3771.072522327706 3430.722123703585 3223.284686275969 3771.507428226948 3270.7916017220755 3608.5105536253136 3825.5841968196837 3220.3305206850696 3344.2656810866974 0.9923667846305205 1.138484674363142 1.1276234850761977 1.0258521453919875 0.9638243470024138 1.1277535303359694 0.9780298318461508 1.0790143181604972 1.1439235281021647 0.9629409944602978 1.0 11.707473749772438 -11.212101090004163 1.6709987256373289 1.0000673052038527 1.0764917562757694 0.15689713274518158 0.06559905376676477 0.591526186181262 2.979278909289346 0.048644364821920506 0.010147086554666215 6.1361915742962135e-12 11.212101090004163 0.07642445107191675 ARVT(ph)PTLPK ddPTM_A549_PD325901_60min_R1 4 ARVTPTLPK 9 1 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 ARVT(0.995)PT(0.005)LPK;ARVT(0.998)PT(0.002)LPK;ARVT(0.999)PT(0.001)LPK;ARVT(0.949)PT(0.051)LPK 72.34 0.0010670999999999999 43037500.0 6988.2 7481.700000000001 7219.9 7307.4 8152.1 7769.6 7556.1 8055.299999999999 8176.3 7837.9 8854.9 True False 7697.636919559063 8112.209116028432 7709.885830785652 7758.761501690494 7579.524619218254 7706.32695360267 7843.651520356571 7894.6307222393925 7832.678544849159 7343.013656375621 7765.803435835924 0.9912222197174988 1.0446065475458717 0.9927995080596251 0.9990932124147085 0.9760129369540734 0.9923412325943257 1.0100244726980099 1.0165890480576658 1.0086114861863018 0.9455574966642466 1.0 12.92291947558944 -7.785314382326766 24.953379306995295 1.0057144618235838 1.000033592742629 0.0 0.02440288831761476 874.7409180363862 914246.1871386383 0.00260376518844599 0.0035993230337569206 1.6394025930374464e-08 7.785314382326766 -0.005680869080954887 AS(ph)APSPEDSVFADTGK ddPTM_A549_PD325901_60min_R1 1 ASAPSPEDSVFADTGK 16 0 J3KQ40;O95759-2;O95759 J3KQ40 TBC1D8 TBC1 domain family member 8 1 AS(0.551)APS(0.448)PEDS(0.001)VFADTGK 71.98 0.00076842 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)ASPGENDSGTGGEEPQR ddPTM_A549_PD325901_60min_R1 1 ASASPGENDSGTGGEEPQR 19 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 AS(0.554)AS(0.423)PGENDS(0.011)GT(0.011)GGEEPQR 43.382 0.060992 6001700.0 0.0 252.47 167.66 194.53 139.43 192.67 171.88 252.64 305.47 220.05 0.0 True False 0.0 273.746532943542 179.03841582148254 206.5456762903154 129.63691780738714 191.10095939953487 178.42098745634487 247.60089700775407 292.6321582005398 206.15600544603205 0.0 0.0 AS(ph)AVSELS(ph)PR ddPTM_A549_MK2206_60min_R1 1 ASAVSELSPR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 AS(1)AVS(0.02)ELS(0.98)PR 67.153 0.0054393 1164700.0 150.13 173.95 220.42 189.55 293.31 354.08 156.54 172.67 245.08 224.65 331.41 True False 175.46827367390256 182.80331199947742 251.67887043070002 235.9897585092229 250.16448754540744 391.5485105807184 184.98129171341938 197.14650127969728 189.56977131233936 173.9014089737989 249.1117505493114 0.7043757401526862 0.7338205106599004 1.0103050935001174 0.9473248772442349 1.0042259628210017 1.5717785681218268 0.7425634933138272 0.7913978399050764 0.7609828556634635 0.6980859336837075 1.0 7.960649264582663 -5.707975699242328 8.254810187369644 0.9325806700610779 0.7167292294836529 0.12847964158869107 0.22671267182488847 0.4468792323248608 60.90542219868489 0.030789827994642967 0.11950488196829107 1.958954282868977e-06 5.707975699242328 -0.215851440577425 AS(ph)AVSELS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ASAVSELSPR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 AS(0.999)AVS(0.046)ELS(0.956)PR;AS(1)AVS(0.04)ELS(0.96)PR 66.498 0.0058089 2687700.0 530.26 484.53000000000003 622.8699999999999 632.48 843.29 509.74 520.63 789.46 762.77 688.06 851.99 True False 584.0916048432194 525.363043558183 665.1417038215844 671.5468531337003 784.0602195925659 505.58884644375826 540.4428595496676 773.7136009806105 730.7134295041272 644.6157741749454 747.2006312095957 0.7817065195698116 0.7031084043755504 0.8901781878112559 0.8987503825399287 1.0493302425659097 0.6766440301653553 0.7232901539105754 1.035483066613708 0.9779347058650387 0.8627077484281802 1.0 9.545351863562354 -8.273523677520833 24.824743455971927 0.9927318500063114 0.8225782682758341 0.3044116654252266 0.10782671601229143 542.0945498022418 1113621.3763775695 0.016930139353458835 0.020546804464714526 5.326921814164145e-09 8.273523677520833 -0.17015358173047723 AS(ph)DKDITVSK ddPTM_A549_MK2206_60min_R1 2 ASDKDITVSK 10 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 AS(1)DKDITVSK;AS(1)DKDITVSK 110.29 5.3201e-05 42357000.0 6158.9 6031.9 5543.9 5645.799999999999 6550.9 6148.9 5452.0 5864.9 8247.6 6972.8 7966.7 True False 7198.371749351878 6338.89794567202 6330.108382999534 7029.021253449591 5587.2712879247565 6799.57251669052 6442.557828168923 6696.267535502965 6379.53176871083 5397.639637180079 5988.348520265531 1.2020629268639649 1.0585385810829435 1.0570708036744076 1.1737829269058502 0.9330237325059714 1.135467064697333 1.0758488431937911 1.118216067892796 1.0653240617378017 0.9013569632618412 1.0 12.547942472963358 -14.999999990928508 0.12176684867877045 0.6967045133576207 1.1308983924957083 0.32906291729120696 0.07287035055576724 87.02992894236675 0.7358568200073725 6.421794706611917 0.22667549610707888 1.0000000208878825e-15 14.999999990928508 0.4341938791380876 AS(ph)DKDITVSK ddPTM_A549_PD325901_60min_R1 4 ASDKDITVSK 10 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 AS(1)DKDITVSK;AS(0.997)DKDIT(0.003)VSK;AS(0.999)DKDIT(0.001)VSK;AS(0.998)DKDIT(0.002)VSK 101.62 0.00011714 57203300.0 10981.900000000001 10722.0 10770.8 11943.9 13814.3 11885.499999999998 12386.0 12133.5 11456.0 11304.1 13085.900000000001 True False 12096.774403552512 11625.580568862273 11501.771258081972 12681.647576434983 12844.031224747814 11788.708428624966 12857.35600787926 11891.48782395339 10974.54415931313 10590.35719683022 11476.417258354726 1.0540549486161435 1.0129973760233366 1.002209226029037 1.1050179939390807 1.1191673268412647 1.0272115559446826 1.1203283845852872 1.0361672598908425 0.9562691833397539 0.9227929726170019 1.0 13.486384707074668 -8.603549340529545 5.425943228797601 0.9795977166071027 1.0622597559853086 0.5143835120212837 0.04264321395536126 0.13674743259960964 6.909649445494152 0.0070247698226456 0.00797937425169259 2.4914413006151476e-09 8.603549340529545 0.08266203937820593 AS(ph)DLEDEESAAR ddPTM_A549_MK2206_60min_R1 2 ASDLEDEESAAR 12 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AS(0.999)DLEDEES(0.001)AAR;AS(1)DLEDEESAAR 94.191 0.00026243 84030000.0 355.15 436.71999999999997 426.39 191.04 477.95 299.58 231.58999999999997 365.74 406.30999999999995 385.4 346.44 True False 415.0906374161494 458.9471826180611 486.8585135783782 237.84480857611152 407.6441881365365 331.2813567548903 273.66690525048426 417.58476503177417 314.28143374374304 298.33787232807515 260.4093867424141 1.5939926075965127 1.762406449165491 1.869588956330357 0.9133495975372712 1.5653974429875712 1.2721559729434013 1.0509102942636395 1.6035703253847424 1.2068744436413765 1.1456494562662531 1.0 8.024637642743158 -2.0000000047586903 0.13791340822914727 0.9180997218901978 3.7884858777807806 0.36887538943249376 0.2488780972550739 45.228374063634035 0.39913403493657845 0.543115529133735 25.71713537555968 0.009999999890427106 2.0000000047586903 2.870386155890583 AS(ph)DLEDEESAAR ddPTM_A549_PD325901_60min_R1 2 ASDLEDEESAAR 12 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AS(1)DLEDEESAAR;AS(1)DLEDEESAAR 71.241 0.0026072 109656000.0 450.01 686.4300000000001 439.56 329.46 574.69 219.35 636.88 596.44 390.94 643.69 596.65 True False 495.69468392014704 744.2778651262943 469.3911848890066 349.8099959420518 534.3257569728704 217.56368632526076 661.1168169141081 584.543536301872 374.51015133047105 603.0473035471774 523.265832475974 0.9473094804884038 1.4223704643671116 0.8970415336846189 0.6685129703325575 1.0211363399069329 0.4157804175667256 1.263443504013734 1.117106258468943 0.7157168079528045 1.1524683365884905 1.0 9.031400248599736 -5.879845498122674 9.604418680277368 0.8746128202601939 1.1839018121615694 0.12475117868907082 0.2550476539919369 0.3098452871502694 24.487450513876027 0.031865908577236916 0.09941715181853265 1.3187257967241437e-06 5.879845498122674 0.3092889919013755 AS(ph)DPGLPAEEPK ddPTM_A549_MK2206_60min_R1 2 ASDPGLPAEEPK 12 0 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK 203.87 6.6375e-25 176351000.0 10075.9 11316.3 10869.4 11250.5 15286.0 14340.099999999999 13607.8 16063.5 17529.6 15840.1 16372.0 True False 11776.465587896311 11892.251334174685 12410.844361942884 14006.87300505413 13037.44964924176 15857.55986381202 16080.16111778376 18340.55031740555 13559.17358901903 12261.810408572772 12306.38055578688 0.9569398195116448 0.966348414163297 1.0084885889626485 1.1381797386777237 1.059405695292846 1.288564073890536 1.3066523536217414 1.490328552271301 1.1018002838083083 0.9963782895375237 1.0 13.587118891003831 -6.11611704390634 2.8997643719349826 1.1221644279371474 0.9627201464547543 0.21543918070630363 0.14555404658923016 0.43579036393301546 6.990208279839907 0.023904135236171395 0.07522888037145059 7.653903037057631e-07 6.11611704390634 -0.1594442814823931 AS(ph)DPGLPAEEPK ddPTM_A549_PD325901_60min_R1 2 ASDPGLPAEEPK 12 0 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK 226.42 3.2764e-40 223750000.0 30825.0 32217.0 31164.0 29361.0 35702.0 29075.0 28647.0 29225.0 30707.0 31268.0 34784.0 True False 33954.33130783438 34932.03965557133 33278.97644435574 31174.56228633092 33194.41468521364 28838.222839785532 29737.177261239904 28642.08444843102 29416.491576468943 29293.73314376972 30505.78851394331 1.113045522239651 1.1450954509700646 1.0909069414529275 1.0219228482516338 1.088134950848474 0.945336090119566 0.9748044128624279 0.9389065434364876 0.9642921232153537 0.9602680202932767 1.0 14.896795401503583 -6.561441638713494 0.995378964269651 0.9768305345575333 1.1320724961744766 0.7839063102752082 0.03292961516253435 0.21268220029707235 0.38351206927754394 0.005309596271305815 0.02144563008453588 2.745101210413044e-07 6.561441638713494 0.15524196161694326 AS(ph)DPGLPAEEPKEK ddPTM_A549_MK2206_60min_R1 3 ASDPGLPAEEPKEK 14 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPKEK;AS(1)DPGLPAEEPKEK;AS(1)DPGLPAEEPKEK 181.41 1.7150999999999997e-26 312877300.0 19375.8 21160.4 20346.6 19476.5 29643.6 22032.6 23118.4 22274.8 34771.7 32664.9 34473.8 True False 22645.96134717113 22237.373976623985 23232.053829531254 24248.24337433332 25283.065708639457 24364.075107943787 27318.714030583353 25432.32111371402 26895.9654689949 25285.87640324169 25913.004031522443 0.8739226575052029 0.8581550000753615 0.896540354845394 0.9357557828816764 0.9756902626142193 0.9402258062517789 1.0542472805295326 0.9814501276184079 1.0379331333517607 0.9757987291817704 1.0 14.661388652889189 -6.610282952271862 0.7571992918575451 1.0174251579948448 0.852697422857953 0.7743212194586138 0.02872434043492905 0.2275898833637612 0.21856070025473587 0.00443363931741043 0.0216258317277774 2.4531101404753844e-07 6.610282952271862 -0.16472773513689176 AS(ph)DPGLPAEEPKEK ddPTM_A549_PD325901_60min_R1 3 ASDPGLPAEEPKEK 14 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPKEK;AS(1)DPGLPAEEPKEK;AS(1)DPGLPAEEPKEK 183.77 1.4019999999999998e-26 723596400.0 26641.0 27676.8 28400.2 27025.7 30724.5 28957.9 32190.2 33845.5 30376.3 31185.3 33297.3 True False 29345.574707932352 30009.221067738043 30327.6083562762 28695.016109182023 28566.517113770813 28722.076463361143 33415.21567615334 33170.4249512189 29099.689747428725 29216.2548358834 29201.94318897553 1.004918560317282 1.0276446630122642 1.0385476117125534 0.9826406387919799 0.9782402810973002 0.9835673015830143 1.1442805521506674 1.1358978659934373 0.9964984028328153 1.000490092279656 1.0 14.833776753306179 -5.184612541042568 17.891631306833144 1.0167593984408456 1.00491333913203 0.0 0.05701230943849479 31153.89346313923 7242423.23374391 0.008276924704920781 25.710419684236584 6.53713507790466e-06 5.184612541042568 -0.01184605930881566 AS(ph)DPGLPAVFLRPGAGIPR ddPTM_A549_MK2206_60min_R1 2 ASDPGLPAVFLRPGAGIPR 19 1 H7BZB3 H7BZB3 CAD 1 AS(1)DPGLPAVFLRPGAGIPR;AS(1)DPGLPAVFLRPGAGIPR 62.663000000000004 0.0006962000000000001 4447500.0 1140.03 1444.01 1170.23 1121.44 1807.2800000000002 1532.22 1451.4499999999998 1362.74 2030.87 2053.0699999999997 2144.79 True False 1332.4391929425103 1517.5039411346095 1336.1862106166318 1396.1928503433553 1541.431506089339 1694.3585033946788 1715.1596771268858 1555.9125682162194 1570.88118763298 1589.2800610809586 1612.1794498073618 0.8264831766102232 0.9412748322253673 0.8288073705295597 0.8660281896721767 0.9561165826009776 1.050973887303387 1.0638764049075486 0.9650988718421726 0.974383582311934 0.985796005073046 1.0 10.65479662216208 -6.871875829477333 3.9273902587446727 0.9962230683283526 0.8682663236212761 0.7230381819042235 0.04041410102551924 0.09915013429767638 2.857005450138699 0.005927724260356158 0.011663608108493763 1.3431489302456425e-07 6.871875829477333 -0.12795674470707652 AS(ph)DPGLPAVFLRPGAGIPR ddPTM_A549_PD325901_60min_R1 2 ASDPGLPAVFLRPGAGIPR 19 1 H7BZB3 H7BZB3 CAD 1 AS(1)DPGLPAVFLRPGAGIPR;AS(1)DPGLPAVFLRPGAGIPR 63.184 0.00066952 16004700.0 1354.53 1257.3400000000001 1399.31 1306.08 1858.81 1473.13 1391.92 1475.1999999999998 1512.45 1564.8200000000002 1904.67 True False 1492.0408884477165 1363.3004544351134 1494.275591334599 1386.753595277104 1728.253598146376 1461.1333176946948 1444.8902772878494 1445.7759787279872 1448.8869861865533 1466.016998146148 1670.4076646979188 0.8932196133795527 0.8161483470453642 0.894557432245037 0.8301887165537453 1.0346298299935772 0.8747166027635118 0.864992604993313 0.8655228357021729 0.8673852597824221 0.8776402486223425 1.0 10.705984521531844 -10.718996633580243 0.8696294702656432 1.0035515909589499 0.8819286437610451 0.0 0.0642248961601407 0.5175743373751651 0.6635327472113933 0.041536732073623496 0.009620917537796701 1.9098680627899362e-11 10.718996633580243 -0.12162294719790478 AS(ph)DSSSPSCSSGPR ddPTM_A549_MK2206_60min_R1 1 ASDSSSPSCSSGPR 14 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 AS(0.276)DS(0.026)S(0.162)S(0.162)PS(0.08)CS(0.146)S(0.146)GPR 55.31399999999999 0.016236 26581000.0 404.76 240.92 331.51 269.08 396.47 136.91 478.8 316.52 371.76 469.57 634.46 True False 473.0735925680997 253.1817989474798 378.5231028785108 335.0046120794603 338.1497882006331 151.39772532649718 565.7917623124134 361.3876793018464 287.5569535787304 363.4938108694716 476.9060717948044 0.9919638699245714 0.5308839914632391 0.7937057740824398 0.7024540719699639 0.7090490312443052 0.31745816268751176 1.1863798675976038 0.7577753790002878 0.6029634986539988 0.7621916187845684 1.0 8.897561340492926 -10.957158604946544 1.1641473911254903 1.0033481697192335 0.7170318007903127 0.01981127358757717 0.22601265410328322 0.6494434073819364 1.534193043222194 0.15226129945628847 0.03369667735888037 1.1036754824779407e-11 10.957158604946544 -0.28631636892892076 AS(ph)FDER ddPTM_A549_MK2206_60min_R1 2 ASFDER 6 0 C9J5X1;P08069 C9J5X1 IGF1R Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain 1 AS(1)FDER;AS(1)FDER 105.81 0.028166000000000004 312480000.0 9388.400000000001 9234.3 8443.0 6683.299999999999 11223.400000000001 9033.2 8125.5 8935.599999999999 11767.6 11535.599999999999 11151.2 True False 10972.932395657535 9704.286427115694 9640.34435643953 8320.708800024737 9572.45272754808 9989.087228247132 9601.798171824392 10202.24866412731 9102.25738899577 8929.699948177851 8382.049282536684 1.3090990073893678 1.1577462861419563 1.1501178329414503 0.9926819229469642 1.1420181873055202 1.1917237529321834 1.1455191741509985 1.2171544595165842 1.0859226762075451 1.065336130483288 1.0 13.033087288528884 -14.999999999990253 0.10403343215992579 0.4735359503430578 1.248574191797323 0.2714460298565575 0.07584572615290305 75.85174120098968 0.5641365768454272 8.418492690568115 0.4626961506064421 1.000000000022443e-15 14.999999999990253 0.7750382414542651 AS(ph)FDER ddPTM_A549_PD325901_60min_R1 2 ASFDER 6 0 C9J5X1;P08069 C9J5X1 IGF1R Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain 1 AS(1)FDER;AS(1)FDER 77.318 0.044689 408720000.0 9742.8 9382.9 8711.8 8871.0 11840.3 8556.099999999999 8892.099999999999 8616.9 8864.400000000001 9253.5 9439.3 True False 10731.88188372972 10173.629912290413 9303.035136309147 9418.941522497244 11008.678174817518 8486.421958365909 9230.49373144382 8445.02916967272 8491.860094781367 8669.232430787813 8278.325940652745 1.2963831045873886 1.2289477347503694 1.1237821756478947 1.1377833622427485 1.3298193685219266 1.0251374516061584 1.1150193647383733 1.0201373116032237 1.0257943641817737 1.0472204758471066 1.0 13.01512333725373 -7.611145730884753 1.3786185251533318 1.0138264989080772 1.2126515316869328 0.5927720391670093 0.07064827316357676 0.19213615902338865 0.7367293899716112 0.0111139462465143 0.018987367036720312 2.4482415775279334e-08 7.611145730884753 0.19882503277885566 AS(ph)GEMASAQYITAALR ddPTM_A549_MK2206_60min_R1 3 ASGEMASAQYITAALR 16 0 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR 145.33 2.2582e-14 49639000.0 4847.2699999999995 5728.6 5021.51 4334.639999999999 6867.4 6421.61 5093.94 5363.43 7845.200000000001 7044.200000000001 6917.9 True False 5665.370671626572 6020.161271171064 5733.63562587998 5396.626994589386 5857.21455718977 7101.140507880267 6019.442960972629 6123.712627315497 6068.274726210076 5452.910327590627 5199.994505672977 1.0894955110906155 1.1577245446323683 1.1026234007795244 1.037813980130535 1.126388604987908 1.3656053867236244 1.1575864079097908 1.1776382880087244 1.1669771419161774 1.0486377094517563 1.0 12.344294383561483 -10.627114288922739 0.8921264572958787 0.9995291123232104 1.1548669605913595 0.2780109397059648 0.07900479471644033 0.5591270142485163 0.7896866990049235 0.055953776566980994 0.014954039753302078 2.3598571315281674e-11 10.627114288922739 0.15533784826814911 AS(ph)GEMASAQYITAALR ddPTM_A549_PD325901_60min_R1 6 ASGEMASAQYITAALR 16 0 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 AS(1)GEMASAQYITAALR;AS(0.569)GEMAS(0.416)AQY(0.014)IT(0.001)AALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR 239.55 2.6693999999999995e-65 109916000.0 20662.2 21545.1 20949.4 20786.399999999998 25226.9 19677.500000000004 18797.3 20392.2 21246.9 22577.100000000002 24809.299999999996 True False 22759.811333292306 23360.781189535028 22371.152262976066 22070.32871866041 23455.049572080436 19517.252964054336 19512.64153777725 19985.461573628567 20353.966681085047 21151.578052968005 21757.913379110334 1.0460475201240524 1.073668268757959 1.028184636696573 1.0143586994812666 1.0780008709198885 0.8970185984283197 0.8968066559411548 0.9185376017176587 0.9354742031755118 0.9721326528156662 1.0 14.409252585864065 -7.251626006082333 24.999260661318008 0.9539785097262365 1.0464995342011467 0.7010441476651368 0.035237147608400014 436.76891648379444 1112654.239194116 0.006447829745333224 0.011080931584577453 5.602398459452631e-08 7.251626006082333 0.09252102447491017 AS(ph)GEWDSGTENR ddPTM_A549_MK2206_60min_R1 2 ASGEWDSGTENR 12 0 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7;Q5HYK7-3;A0A0U1RQN2 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 AS(0.999)GEWDS(0.001)GTENR;AS(1)GEWDSGTENR 117.7 2.1249e-05 8501200.0 1586.9499999999998 1773.92 1219.98 1201.1100000000001 2470.3 1965.39 1701.62 1972.03 2765.6 2450.1000000000004 2830.8 True False 1854.7883627975734 1864.204950975068 1392.9915087017764 1495.3820039198774 2106.9221423866215 2173.366265279706 2010.782327873955 2251.5712915885874 2139.196015755694 1896.6207083316478 2127.834233894545 0.8716789744484844 0.8761044076084066 0.654652268730635 0.7027718513499526 0.9901721237609528 1.0213982981662177 0.9449901199275511 1.0581516434518343 1.0053395991474177 0.8913385629952432 1.0 11.055170048634002 -6.775959646231292 23.371379888844437 1.003169087021345 0.7747414104260004 0.6553162343080678 0.07305184503245347 40.20269713208015 64709.18197816774 0.009416990722105157 0.01786518501720363 1.6750985155763457e-07 6.775959646231292 -0.22842767659534458 AS(ph)GEWDSGTENR ddPTM_A549_PD325901_60min_R1 2 ASGEWDSGTENR 12 0 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7;Q5HYK7-3;A0A0U1RQN2 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 AS(1)GEWDSGTENR;AS(1)GEWDSGTENR 111.31 6.8224e-05 8670800.0 3432.0 2808.2 2283.5 2035.11 2586.7 2569.8 1795.99 2264.0 3234.1000000000004 2550.6000000000004 3464.5 True False 3780.4141134951333 3044.8568693787574 2438.4720418009983 2160.814122629846 2405.019115630556 2548.872400814475 1864.337382253438 2218.8427439263587 3098.1820238857 2389.5546807118803 3038.388463274971 1.2442168469203438 1.0021288937151949 0.8025544038475765 0.7111711187518075 0.7915443152513393 0.8388895730821516 0.6135941486046635 0.7302696053337259 1.0196793666555328 0.7864546319848332 1.0 11.569090617376542 -8.78133556482984 24.925713487270112 1.009293064821373 0.8320996398844615 0.006029784645049219 0.17159763731354347 278.1542193230005 348466.97431882366 0.02847465150409038 0.030332999295401997 1.6544910994943425e-09 8.78133556482984 -0.17719342493691148 AS(ph)GPPVSELITK ddPTM_A549_PD325901_60min_R1 2 ASGPPVSELITK 12 0 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 1 AS(0.993)GPPVS(0.007)ELITK;AS(0.992)GPPVS(0.007)ELIT(0.001)K 59.185 0.010536 3433100.0 3369.5 3695.0 4181.9 4085.1000000000004 4243.0 4089.6 2715.3 3995.0 3815.6 3987.2 4244.2 True False 3711.5691595052026 4006.3906176036257 4465.708881807572 4337.427349064761 3944.986317555357 4056.295653502558 2818.632227369174 3915.316590983127 3655.243601106425 3735.447511540189 3722.1903062004994 0.9971465331373294 1.0763529771515712 1.1997529718909064 1.1652889810172755 1.0598561580754535 1.0897604151903515 0.7572509720080244 1.0518851184102311 0.98201416381571 1.0035616677947943 1.0 11.86193610330283 -7.558240587154429 24.99973939273688 0.9783165126708906 1.1043105708257765 0.3814289273067585 0.08658839330418415 150.59759801751213 106467.31624132348 0.012778391611284749 0.01895344685286454 2.7654092606090286e-08 7.558240587154429 0.12599405815488596 AS(ph)GQAFELILS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ASGQAFELILSPR 13 0 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 2 AS(1)GQAFELILS(1)PR 140.28 1.3721e-09 5035300.0 1746.5 1209.0 1254.2 1640.9 1820.5 1464.5 1425.7 1618.7 1580.7 1549.3 1840.9 True False 1923.8033942946531 1310.8866729858692 1339.317554117282 1742.2546662457135 1692.6343603840523 1452.5735975534271 1479.9557936729743 1586.4137586544148 1514.2686760323202 1451.4769335948083 1614.4809704265829 1.1915924867088028 0.8119554810481927 0.8295654012963706 1.0791422743034065 1.0484077492327577 0.8997155272568025 0.9166758981878468 0.9826153344100723 0.9379290953378135 0.8990362600627586 1.0 10.656854720948143 -11.003521752708881 1.2799097399445793 1.0000268085599007 0.9582101933030138 0.0 0.10917348192445558 1.9690154833031548 5.735574037896255 0.0714086568797263 0.016205193481165097 9.919236550552427e-12 11.003521752708881 -0.04181661525688685 AS(ph)GVAVSDGVIK ddPTM_A549_MK2206_60min_R1 2 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK 198.37 1.5988999999999998e-24 92244000.0 10376.5 11218.6 11174.5 10078.0 14852.1 10404.0 10366.9 10495.6 15031.3 15912.400000000001 16935.699999999997 True False 12127.799518931924 11789.57882148512 12759.212129697207 12547.110452418616 12667.375764457904 11504.94437438373 12250.431538672849 11983.383441426944 11626.734550053718 12317.777788358237 12730.09828845833 0.9526870291274596 0.9261184442051067 1.0022870083623214 0.9856255755538338 0.9950728955441536 0.903759272999064 0.9623202634483687 0.9413425701741525 0.9133263771101461 0.9676105800004764 1.0 13.635955937808673 AS(ph)GVAVSDGVIK ddPTM_A549_PD325901_60min_R1 4 ASGVAVSDGVIK 12 0 P23528;E9PP50;E9PS23 P23528 CFL1 Cofilin-1 1 AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(1)GVAVSDGVIK 184.65 3.1553e-19 176119300.0 29525.1 23954.7 24974.0 32364.6 29859.8 37090.7 28004.2 29108.2 30434.0 26899.8 31111.9 True False 32522.46641677016 25973.44663802695 26668.88582086189 34363.68783666036 27762.550658717773 36788.64563658241 29069.915155486244 28527.61411605886 29154.964817085896 25201.342037251416 27285.333534583515 1.1919394855682708 0.9519197045953726 0.9774073601504526 1.2594197462569112 1.0174898768794378 1.3482937853757102 1.0654044275706145 1.0455292430235748 1.0685214743713016 0.9236222824730843 1.0 14.735838058801459 -9.413546169381506 0.7748841536741642 1.0120710476863202 1.1082987923842056 0.1640947493275966 0.11690404402631 0.9476694556091667 1.2293689751424117 0.036890983708567034 0.025340965766515594 3.858813867769311e-10 9.413546169381506 0.09622774469788542 AS(ph)GYQSSQKKSCVEEPEPEPEAAEGDGDKK ddPTM_A549_MK2206_60min_R1 2 ASGYQSSQKKSCVEEPEPEPEAAEGDGDKK 30 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 AS(0.231)GY(0.074)QS(0.231)S(0.231)QKKS(0.231)CVEEPEPEPEAAEGDGDKK;AS(0.249)GY(0.006)QS(0.249)S(0.249)QKKS(0.249)CVEEPEPEPEAAEGDGDKK 65.736 0.00012207 5579900.0 1384.8899999999999 1514.56 1338.17 690.74 1339.0700000000002 1149.5300000000002 812.54 1059.57 1179.08 1466.83 1435.47 True False 1618.625574690275 1591.644634791195 1527.9426279114857 859.9713310084974 1142.094576855303 1271.172501603742 960.1680003118811 1209.7672922970346 912.0202626038564 1135.472084242322 1079.0031820434517 1.5001119566903118 1.4751065254292262 1.4160686950133157 0.7970053706235188 1.0584719265538836 1.178098936832006 0.8898657726787083 1.1211897355167548 0.845243348473396 1.0523343240674485 1.0 10.075483404086292 -6.186178395535609 6.0460104392771985 0.9572982912361537 1.4731728620679099 0.7695681330311881 0.11370216938104259 0.07563258091920289 4.797886660154575 0.01608666816312877 0.04319378365085633 6.513607790463235e-07 6.186178395535609 0.5158745708317561 AS(ph)IKDPHFLNFNK ddPTM_A549_MK2206_60min_R1 2 ASIKDPHFLNFNK 13 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 AS(1)IKDPHFLNFNK;AS(1)IKDPHFLNFNK 60.55 0.0033936 3537300.0 917.83 1037.72 1124.17 940.03 1862.7 1173.85 1074.73 1344.66 1633.38 1692.85 1422.75 True False 1072.7372652109368 1090.5355155395098 1283.5942100176035 1170.33739219955 1588.6992975037692 1298.0660278614323 1269.9945294695497 1535.2696728485428 1263.4220379718822 1310.4340092646148 1069.4419090975923 1.0030813792552091 1.0197239384977128 1.2002467820816143 1.0943440520178367 1.4855405272497058 1.2137789035748148 1.1875301675255892 1.4355802402993738 1.1813844466203616 1.2253437967195193 1.0 10.062642403693378 -3.7739012119619617 9.046513254786493 1.144428567967903 1.1562324319600708 0.0 0.15889416391507233 0.0 0.0 0.022394036210556863 0.0 0.00016830568588799814 3.7739012119619617 0.011803863992167818 AS(ph)IKDPHFLNFNK ddPTM_A549_PD325901_60min_R1 2 ASIKDPHFLNFNK 13 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 AS(1)IKDPHFLNFNK;AS(1)IKDPHFLNFNK 68.944 0.0015075999999999998 6122700.0 2147.31 1871.76 2159.0 1816.29 2776.8999999999996 2060.77 1937.05 2043.7 2250.5 2482.88 2128.0 True False 2365.303330433926 2029.499784142292 2305.5227231216786 1928.4781082061224 2581.8601237849352 2043.9877723661164 2010.7654977444317 2002.9368002483645 2155.919311324563 2326.110533069049 1866.2694905034314 1.2673964518360523 1.0874634100109672 1.2353643109172607 1.0333331375877073 1.3834337092916154 1.0952264840458519 1.0774250492633957 1.073230211628261 1.1552025697762425 1.2463958420289956 1.0 10.865941611977464 -7.49460847525922 24.872848583477847 1.075902020268696 1.1927897074156675 0.12720589202047416 0.10504164563055064 708.7210874637149 623549.9548820241 0.013893481024635133 0.022179719894323248 3.2017802748333e-08 7.49460847525922 0.11688768714697151 AS(ph)ISEPSDTDPEPR ddPTM_A549_MK2206_60min_R1 2 ASISEPSDTDPEPR 14 0 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 AS(0.9)IS(0.097)EPS(0.001)DT(0.002)DPEPR;AS(0.975)IS(0.025)EPSDTDPEPR 147.26 3.4326e-13 8101900.0 986.9100000000001 1299.19 1056.23 1125.1599999999999 1902.8400000000001 1344.52 1533.92 1334.42 1611.1100000000001 1857.98 1814.56 True False 1153.4762803670894 1365.3132217108434 1206.0192964114788 1400.824250510351 1622.934756676905 1486.7962139798556 1812.6134086179138 1523.5781214898577 1246.1961574139993 1438.2610275768488 1363.9546726917067 0.8456852001472694 1.000996036779181 0.884207753056376 1.0270313805559856 1.1898744065109672 1.0900627738938906 1.3289396230747157 1.117029877894066 0.9136639086067897 1.0544786101568182 1.0 10.413579985791426 -3.8697527794212867 11.852402506774462 1.007872644605386 0.5653995270689129 0.0 0.13751054930390413 0.0 0.0 0.01934733431524721 0.0 0.00013497309934836844 3.8697527794212867 -0.4424731175364731 AS(ph)ISEPSDTDPEPR ddPTM_A549_PD325901_60min_R1 2 ASISEPSDTDPEPR 14 0 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 AS(0.96)IS(0.04)EPSDTDPEPR;AS(0.842)IS(0.157)EPS(0.001)DTDPEPR 203.87 1.0896e-31 9132900.0 1572.56 1884.68 1943.02 1876.3 2099.34 2740.6000000000004 1729.1999999999998 2286.51 2376.9 2033.8 2291.7 True False 1732.205133542515 2043.5085978850352 2074.885021528433 1992.1947896135237 1951.8896007298285 2718.281462243036 1795.005652254547 2240.9037643176057 2277.0071588924034 1905.3855209095202 2009.8354282832302 0.8618641651780102 1.0167541924716534 1.0323656316978982 0.9912228442083068 0.9711688694815684 1.3524895740169878 0.8931107626995174 1.1149687844002982 1.1329321430249575 0.9480306168834284 1.0 10.97286165844439 -4.142069252505447 0.7638610905648624 1.0680312934060312 4.671019969952825e-10 0.16613296791453702 0.11731947447462619 13.858549568900253 1.5915392311764995 0.01687213809730908 18.894589771049766 7.209925007055505e-05 4.142069252505447 -1.0680312929389293 AS(ph)ISQGPPTASR ddPTM_A549_MK2206_60min_R1 1 ASISQGPPTASR 12 0 Q96HP0;K7ESB7 Q96HP0;K7ESB7 DOCK6 Dedicator of cytokinesis protein 6 1 AS(0.996)IS(0.003)QGPPTASR 52.008 0.032573000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)LADALPLHIAPR ddPTM_A549_MK2206_60min_R1 2 ASLADALPLHIAPR 14 0 H3BRB6;Q8ND25;Q8ND25-2 H3BRB6 ZNRF1 E3 ubiquitin-protein ligase ZNRF1 1 AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR 86.49700000000001 3.1481e-05 5526900.0 262.62 524.592 508.65 349.85 523.89 161.84 467.78 405.1 931.12 627.87 712.5699999999999 True False 306.94383555745196 551.2914920864033 580.7842185127281 435.5632657053632 446.8264749928863 178.96580137930258 552.7695709576038 462.524165566719 720.2228066931017 486.0337309253468 535.6192030684738 0.5730635380490869 1.029260132811045 1.0843229951157678 0.8131957614851995 0.8342241511004298 0.33412879962861136 1.0320197031601526 0.863531708566449 1.3446545653461721 0.9074240209106395 1.0 9.065063874998234 -8.652916260655097 7.067966780593032 1.162385518795129 0.8247457066256837 0.18735246516456117 0.22991574408844528 0.20250371339008605 12.073665382989622 0.0394855635317848 0.0447496800917176 2.223738623854012e-09 8.652916260655097 -0.3376398121694454 AS(ph)LADALPLHIAPR ddPTM_A549_PD325901_60min_R1 7 ASLADALPLHIAPR 14 0 H3BRB6;Q8ND25;Q8ND25-2 H3BRB6 ZNRF1 E3 ubiquitin-protein ligase ZNRF1 1 AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR 102.38 8.4778e-06 11111380.0 1300.3200000000002 1536.55 1333.916 1144.7999999999997 1000.7299999999999 1296.175 1154.1799999999998 1447.0399999999997 1555.86 2034.9099999999999 1662.4900000000002 True False 1432.3275291550103 1666.0404610226947 1424.4435612485318 1215.5116959705601 930.4421771310804 1285.619380545451 1198.1029514915301 1418.1776520190806 1490.4726148488928 1906.4254353200856 1458.014269392411 0.9823823807649668 1.1426777473974743 0.976975048290941 0.8336761316314775 0.6381571131802555 0.8817604927016242 0.8217360945245124 0.9726774845695225 1.022262021804497 1.3075492300322535 1.0 10.509789123861182 -8.481696151092704 7.269719778828188 1.009910347770808 0.8962343545242252 0.2146301422793001 0.14764756296214987 0.3690033018261094 55.20593822569015 0.02118160062354604 0.02541803036941883 3.298404003352391e-09 8.481696151092704 -0.11367599324658284 AS(ph)LDKKR ddPTM_A549_PD325901_60min_R1 2 ASLDKKR 7 2 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 AS(1)LDKKR;AS(1)LDKKR 57.598 0.01142 57103000.0 21219.6 19208.7 16316.9 17456.4 19888.4 17382.1 15393.8 16444.3 19997.1 22495.0 27863.0 True False 23373.79817095612 20827.48456193851 17424.262955490572 18534.642181639145 18491.50739525525 17240.545940616892 15979.619482810576 16116.305536196203 19156.691428788457 21074.661860979293 24436.027638109543 0.9565301904677499 0.8523269358828486 0.71305627958598 0.758496530456251 0.7567313177538137 0.70553799479786 0.6539368722062395 0.6595305004100502 0.7839527648476046 0.8624422174131123 1.0 14.576722156826072 -10.267001879298574 0.8655301576434119 0.9887279552747257 0.7554705594059336 0.3143392962404935 0.09059653798929876 0.3461330046012189 0.5021482108332018 0.04501859726444817 0.017244639992871187 5.4075198297426744e-11 10.267001879298574 -0.23325739586879213 AS(ph)LEDAPVDDLTR ddPTM_A549_MK2206_60min_R1 2 ASLEDAPVDDLTR 13 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR 120.14 1.1028e-05 46412000.0 1239.06 1455.71 1111.3400000000001 1010.56 1246.76 1374.83 1060.61 1447.0600000000002 1472.88 1927.87 1231.32 True False 1448.1830358914651 1529.79942115987 1268.9447230943395 1258.147245365762 1063.3632555729855 1520.3135980617055 1253.30910824179 1652.1851864353894 1139.2750317060486 1492.3628280361347 925.5492612968177 1.5646741847779857 1.6528557529357404 1.3710180280586892 1.3593520063998865 1.1488996858828153 1.6426068947767771 1.3541246918459393 1.7850861704761756 1.2309177688822015 1.6124077782149984 1.0 9.85416596770127 -9.128477924154744 2.4956740618457456 1.0838165535543307 1.4722186095171714 0.0 0.23676770772755393 0.16066798934055254 2.074524357260747 0.03471843449336659 0.03338251011344364 7.43912876162948e-10 9.128477924154744 0.3884020559628407 AS(ph)LEDAPVDDLTR ddPTM_A549_PD325901_60min_R1 2 ASLEDAPVDDLTR 13 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR 159.52 1.6208e-18 84027000.0 2316.75 1988.99 1841.04 1755.6100000000001 2402.9 2248.42 2067.31 2093.75 2322.5 2214.4 2341.5299999999997 True False 2551.94475449879 2156.6091676610113 1965.9840454728746 1864.050042420401 2234.1285935549786 2230.1096129812745 2145.9826133254396 2051.9885137348992 2224.893401711308 2074.5824060881314 2053.5366541816275 1.2427071848472984 1.0501926825944385 0.9573649642286789 0.9077266960999338 1.0879419118259277 1.085984809884007 1.0450179250297598 0.9992461101468164 1.0834446987740618 1.0102485396906105 1.0 11.003894983298323 -5.181262192679412 0.004711518584687565 6.917991310621907e-07 2.1234677585716124 0.06467610974514448 0.08034012001862173 86619.90354407791 58.48888829025724 12696.680272364096 13678.79177923482 6.587760582540505e-06 5.181262192679412 2.1234670667724815 AS(ph)LEDAPVDDLTRK ddPTM_A549_MK2206_60min_R1 2 ASLEDAPVDDLTRK 14 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTRK;AS(0.999)LEDAPVDDLT(0.001)RK 59.871 0.0030614 3521300.0 1390.08 1083.16 1004.31 1089.94 1154.63 1064.25 979.0699999999999 939.77 1171.92 1274.48 1773.1599999999999 True False 1624.6915198069562 1138.288217449577 1146.7362596962907 1356.9753489292652 984.7854565291125 1176.8682286080254 1156.9543457126456 1072.985275424921 906.4819911716854 986.5740828351984 1332.8354352735794 1.2189738333851172 0.8540350798941135 0.8603734784864197 1.0181116985764493 0.7388650019850157 0.8829808973126979 0.8680399058231579 0.8050395773013633 0.6801154645064038 0.7402069728380931 1.0 10.380282947031217 -5.261399252037214 8.146513853548738 0.851442470391486 1.2217020308970767 0.5407176391534274 0.09897248741642417 0.0669968813779436 57.891846724928314 0.016540756771160774 0.13533079368968148 5.477731590560525e-06 5.261399252037214 0.3702595605055907 AS(ph)LEDAPVDDLTRK ddPTM_A549_PD325901_60min_R1 2 ASLEDAPVDDLTRK 14 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTRK;AS(1)LEDAPVDDLTRK 102.08 1.1785e-05 8782400.0 1911.8600000000001 1973.94 2184.95 2004.0900000000001 2711.1000000000004 2041.35 2094.8 2148.0 2471.3 2173.7 2316.2 True False 2105.950619763057 2140.2908513430325 2333.2338461717077 2127.878087681378 2520.681688787258 2024.7259224074357 2174.518760318545 2105.156454926598 2367.439855177246 2036.4522110340376 2031.322083601527 1.0367388986532426 1.0536442588899069 1.1486282086959307 1.0475335767081593 1.240906948797651 0.996752774339756 1.0704943238066564 1.0363479390693981 1.1654674924715944 1.0025255115739278 1.0 10.98820329415048 -11.118908719482178 1.4802864179870088 1.0001560593894996 1.0982938431680251 0.18564789525138714 0.06789033754453662 0.502304953877144 1.974653328689085 0.04797788563526912 0.01044627983986403 7.60486099994066e-12 11.118908719482178 0.09813778377852556 AS(ph)LEEPPDGPSAGQATGPGEGR ddPTM_A549_MK2206_60min_R1 2 ASLEEPPDGPSAGQATGPGEGR 22 0 E9PS47;E9PLE4;Q9BVG9 E9PS47 PTDSS2 Phosphatidylserine synthase 2 1 AS(0.999)LEEPPDGPSAGQATGPGEGR;AS(1)LEEPPDGPSAGQATGPGEGR 48.848 0.012417000000000001 999840.0 436.69 0.0 0.0 342.32 369.58 227.57 200.12 210.79 335.28 175.58 283.76 True False 510.3925959545491 0.0 0.0 426.18841536732856 315.2152715796656 251.65130635125976 236.47921360476235 240.67012801730118 259.339615332141 135.91635605439407 213.29456062240928 2.3929001961662117 0.0 0.0 1.9981213497600656 1.4778401786704929 1.1798299291689514 1.108697816365774 1.128346298728894 1.2158754286812044 0.6372237325592369 1.0 7.73670336472121 -6.25441725917039 24.994882982862844 1.1867674764128837 0.7178701710027816 0.06791493305224539 0.6692399585629873 1011.2596727573931 3599516.569328589 0.08395776134734155 0.21700176549995318 5.566506760191477e-07 6.25441725917039 -0.4688973054101021 AS(ph)LENVHPPIAPPPTEIPER ddPTM_A549_PD325901_60min_R1 2 ASLENVHPPIAPPPTEIPER 20 0 C9J2P9;Q75N03-2;Q75N03 C9J2P9 CBLL1 E3 ubiquitin-protein ligase Hakai 1 AS(0.999)LENVHPPIAPPPT(0.001)EIPER;AS(1)LENVHPPIAPPPTEIPER 62.717 0.00064484 14310900.0 2955.3 2758.6 2780.8 3312.9 4002.6 3506.2999999999997 3207.0 3750.4 3452.5 3660.0 3653.2000000000003 True False 3255.319880423128 2991.076903307542 2969.521810308833 3517.530308858203 3721.4711842203797 3477.7458553100587 3329.0441399377387 3675.595329868115 3307.4034313921607 3428.9069753804915 3203.8795595428273 1.0160556350275667 0.9335796954035155 0.9268518853850313 1.097897172314471 1.1615515237256326 1.085479585195865 1.039066568536294 1.1472326788690517 1.032312036056719 1.0702359160685098 1.0 11.645604199538479 -6.2528135064607415 24.87754439130194 1.0465826714261777 0.9563041325691211 0.3944344056085114 0.05675950417216854 622.2455020495792 1794588.4095294904 0.009166958874969542 0.02383643073245711 5.587100629664871e-07 6.2528135064607415 -0.09027853885705661 AS(ph)LGTLPLGKPR ddPTM_A549_MK2206_60min_R1 1 ASLGTLPLGKPR 12 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 AS(0.965)LGT(0.035)LPLGKPR 50.843 0.0078675 2865600.0 915.88 1242.6 663.03 1064.5 1320.7 1154.5 787.32 1026.0 1375.0 1296.2 1154.0 True False 1070.4581528838603 1305.8430324262763 757.0576239073905 1325.3025477872216 1126.4267795207106 1276.6684237049237 930.3658527648486 1171.4386419932202 1063.5646954238061 1003.3875197500026 867.4299512202571 1.2340571724298812 1.505416121024276 0.8727593771029 1.527849650479387 1.29857953133404 1.4717827323220398 1.0725544482941318 1.350470594594179 1.2261101820701907 1.156736078041215 1.0 9.760603448206227 -10.16702379775295 0.5167401363519671 0.9778704438175095 1.3019450092325642 0.13895915075605736 0.18763931095339537 1.04342686466435 0.49948548352027844 0.15614151329488601 0.04344548754794036 6.807320560389171e-11 10.16702379775295 0.32407456541505464 AS(ph)LGTLPLGKPR ddPTM_A549_PD325901_60min_R1 1 ASLGTLPLGKPR 12 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 AS(0.994)LGT(0.006)LPLGKPR 63.292 0.0019801 3909800.0 1751.5 2067.1 1770.6 2394.5 2231.8 2355.8 2264.0 2058.5 2468.2 2495.8 2668.2 True False 1929.3109906138484 2241.3017714880793 1890.763563482745 2542.4028266959335 2075.046067292022 2336.6151458630006 2350.1577589083367 2017.441602637989 2364.470137396707 2338.214762064109 2340.0283151133717 0.8244818997074296 0.9578096799138479 0.8080088395815584 1.0864837875146638 0.8867610933979183 0.998541398312009 1.0043287697544268 0.8621440986880735 1.0104450968073653 0.9992249867074045 1.0 11.192310271661576 -2.2892559348807624 0.28143649121580117 1.0031900598511092 7.61806948311004e-15 0.24421464830313955 0.07422946081548785 35.06148568565342 0.5067251207265756 0.025128185625418506 17.09992069286939 0.005137408088148232 2.2892559348807624 -1.0031900598511017 AS(ph)LPVKPR ddPTM_A549_MK2206_60min_R1 2 ASLPVKPR 8 1 A0A0G2JLR5;A0A0G2JMW4;Q02833-3;Q02833-2;Q02833 A0A0G2JLR5 RASSF7 Ras association domain-containing protein 7 1 AS(1)LPVKPR;AS(1)LPVKPR 65.347 0.0025076 8786900.0 2289.4 2582.3 2219.5 1936.58 3014.4 2525.1000000000004 1983.9699999999998 1832.25 3123.7 3095.6000000000004 3523.2 True False 2675.7947495439457 2713.728040104917 2534.2584743713765 2411.042186936379 2570.9857531515336 2792.304405974276 2344.4316680763554 2091.9770485302915 2416.186937523888 2396.301810012429 2648.292204626697 1.0103850114685986 1.024708691648112 0.9569406540350426 0.9104139576154661 0.9708089419513053 1.054379271704226 0.8852617033651036 0.7899343753969084 0.9123566248855357 0.9048479642185903 1.0 11.370846598237751 -7.776026952670324 24.990909436842564 0.9372259604782213 0.9838991913260028 0.245814180587416 0.06298272605850243 480.2762371557598 822790.5857752152 0.011542149110297701 0.01598496609459325 1.6748389309287758e-08 7.776026952670324 0.04667323084778152 AS(ph)LPVKPR ddPTM_A549_PD325901_60min_R1 2 ASLPVKPR 8 1 A0A0G2JLR5;A0A0G2JMW4;Q02833-3;Q02833-2;Q02833 A0A0G2JLR5 RASSF7 Ras association domain-containing protein 7 1 AS(1)LPVKPR;AS(1)LPVKPR 82.749 0.00096988 12378100.0 2607.1000000000004 2600.8 2741.85 2255.19 2839.8999999999996 2644.4 2404.2 3152.3999999999996 3113.6 3161.1 3269.6 True False 2871.7708727544186 2819.978543508393 2927.9284290834544 2394.4879643919016 2640.435221123134 2622.8648831480264 2495.693146628719 3089.5229089900395 2982.746219835663 2961.5076065232984 2867.4599277020793 1.001503402021661 0.9834413085480372 1.0210878278706526 0.8350554235332568 0.920827243517618 0.9146997514451524 0.8703497902510233 1.077442400900757 1.0402050229263262 1.0327982539224487 1.0 11.485557609609572 -8.265907133819818 24.998166740732287 1.0239004396905365 0.9352309924345658 0.4416731825821496 0.054559698092493454 320.8348745403433 1795145.996346604 0.009274442153715907 0.011406953164224068 5.421168000811094e-09 8.265907133819818 -0.0886694472559707 AS(ph)LSDLSSLDDVEGMSVR ddPTM_A549_PD325901_60min_R1 1 ASLSDLSSLDDVEGMSVR 18 0 A0A087WTM5;H7BYJ1;Q969K3;Q969K3-2 A0A087WTM5 RNF34 E3 ubiquitin-protein ligase RNF34 1 AS(0.775)LS(0.183)DLS(0.036)S(0.006)LDDVEGMSVR 49.049 0.019694999999999997 1459800.0 1417.1 1349.1 1361.6 1542.6 2193.0 1942.1 1852.1 1694.1 1656.5 1535.3 1749.0 True False 1560.9629487861175 1462.7933916668621 1454.006363965946 1637.8828985012117 2038.971245439288 1926.2841815012032 1922.5826790080084 1660.3098465042592 1586.8830656339212 1438.360895984062 1533.884087824485 1.0176537856912242 0.9536531497249892 0.9479245371325092 1.0678009580399446 1.3292863923839058 1.2558212167343499 1.2534080601454158 1.0824219767864496 1.0345521400411715 0.9377246347369675 1.0 10.582973750397928 -4.173851454646245 13.376596455430088 1.0622955590859424 1.0820441928686566 0.0 0.1323702782772777 0.0 0.0 0.018624788675055338 0.0 6.701137748104811e-05 4.173851454646245 0.019748633782714187 AS(ph)LSDLTDLEDIEGLTVR ddPTM_A549_PD325901_60min_R1 1 ASLSDLTDLEDIEGLTVR 18 0 J3KSI3;Q8WZ73-2;Q8WZ73;J3KSU7;K7EN88;Q8WZ73-3 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 AS(0.998)LS(0.002)DLTDLEDIEGLTVR 174.23 7.217299999999999e-55 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)LSEIGFGK ddPTM_A549_MK2206_60min_R1 2 ASLSEIGFGK 10 0 Q00537;Q00537-2;F5H6Z0 Q00537 CDK17 Cyclin-dependent kinase 17 1 AS(0.997)LS(0.003)EIGFGK;AS(0.969)LS(0.031)EIGFGK 56.225 0.015614 2071040.0 1545.88 1946.85 1745.25 1420.6 2329.6 2239.3 1455.1399999999999 2203.8 2330.8 2633.6 2788.4 True False 1806.7867508626687 2045.9363493313167 1992.7526931275715 1768.6470637731582 1986.9189260024605 2476.261239672963 1719.5201023627515 2516.195398854445 1802.877521522771 2038.667930885365 2095.963324075013 0.8620316634882133 0.9761317508903576 0.950757425112393 0.8438349294846056 0.9479740905673166 1.1814430201281227 0.8203960835629636 1.200495910378054 0.8601665405182669 0.9726639333181397 1.0 11.033397756958236 -5.253092218760299 22.462452724694458 0.9561093556000493 0.8620314801448806 0.0493533406556822 0.11810045002551614 647.2230713373092 1741517.0069100668 0.015240883561165597 0.22046559044771333 5.58351620903616e-06 5.253092218760299 -0.09407787545516866 AS(ph)LSEIGFGK ddPTM_A549_PD325901_60min_R1 2 ASLSEIGFGK 10 0 Q00537;Q00537-2;F5H6Z0 Q00537 CDK17 Cyclin-dependent kinase 17 1 AS(0.994)LS(0.006)EIGFGK;AS(0.772)LS(0.228)EIGFGK 58.511 0.011047 3990700.0 3371.8999999999996 3184.5 3254.8 3500.8 3309.0 3615.3 3220.1 3750.6000000000004 3414.6000000000004 3811.7999999999997 3695.5 True False 3714.2128057384166 3452.8689910037224 3475.6903007023825 3717.0364651063387 3076.58725543028 3585.858195448897 3342.6426676063315 3675.7913407112196 3271.0962365913583 3571.122297474141 3240.9769277046225 1.1460164291786419 1.0653790718125136 1.072420562760375 1.146887666287362 0.9492777406500178 1.1064127500557468 1.0313688564187689 1.134161526819183 1.0092932808713537 1.1018660043357171 1.0 11.662213034906053 -2.0000000000008864 0.09234187253841437 0.9422584729042189 1.4273786748247999 0.0 0.0641729092384677 107.61693742880966 0.6907652107091076 0.4491896407060733 6.630789841892968 0.00999999999997959 2.0000000000008864 0.4851202019205809 AS(ph)LTLEEK ddPTM_A549_MK2206_60min_R1 1 ASLTLEEK 8 0 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 SCYL2 SCY1-like protein 2 1 AS(0.766)LT(0.234)LEEK 112.36 0.0014449000000000003 8680900.0 2717.3 3267.7 2929.4 2863.6 4005.6 2593.1 2593.3 3148.8 4044.3 3990.9 4142.5 True False 3175.913808393363 3434.011972524818 3344.8329690576734 3565.182128551891 3416.3815461862355 2867.5001208395297 3064.4690417810825 3595.15204279557 3128.27250742 3089.352918199574 3113.8029228162172 1.0199469546136115 1.1028353616609088 1.074195461937747 1.1449607495799485 1.0971733378348676 0.9208996818096876 0.9841563893868672 1.1545856086306214 1.004646917278469 0.992147863810684 1.0 11.604461921669559 -7.178724174183915 24.999975017362036 1.0083596495770737 1.0910739981674182 0.3032947909123891 0.059073801509305426 86.9098385771931 26266.78866530956 0.008564358540902643 0.01483390399659848 6.626372192096243e-08 7.178724174183915 0.08271434859034454 AS(ph)LTLEEK ddPTM_A549_PD325901_60min_R1 2 ASLTLEEK 8 0 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 SCYL2 SCY1-like protein 2 1 AS(0.851)LT(0.149)LEEK;AS(0.981)LT(0.019)LEEK 118.91 0.0012332 28508000.0 12126.2 12119.7 11624.3 12082.6 14503.9 14135.3 13075.2 13274.900000000001 12961.099999999999 13794.1 14779.599999999999 True False 13357.242897163382 13141.069653090844 12413.194900594417 12828.914760424437 13485.196099738667 14020.18680334378 13572.783891023973 13010.121705542408 12416.39004043937 12923.13817188416 12961.802895603621 1.030508101746701 1.0138303875572763 0.9576750241129434 0.9897477120853105 1.0403796607887448 1.0816540658938072 1.047137037983164 1.003727784655264 0.9579215283894461 0.9970170257925636 1.0 13.661978780460707 -8.528377515236398 19.901823473987083 0.9801661433899499 1.0220338481267655 0.2148298898413985 0.03164724448554676 13.543581924018985 49015.667501186275 0.00609455441846764 0.0069332213092913 2.962255297167632e-09 8.528377515236398 0.04186770473681556 AS(ph)LTPQKLWLGT(ph)AK ddPTM_A549_MK2206_60min_R1 1 ASLTPQKLWLGTAK 14 1 A0A087WX19;A0A087WX45;Q6IPM2-2;Q6IPM2-3;Q6IPM2-4;Q6IPM2;C9JP75;C9JE72 A0A087WX19 IQCE IQ domain-containing protein E 2 AS(0.791)LT(0.217)PQKLWLGT(0.992)AK 49.537 0.014662999999999999 67657000.0 4665.9 5258.1 6060.4 4114.5 6309.0 4166.2 4381.6 4013.7 7168.1 6833.7 8136.3 True False 5453.389849697342 5525.714830839044 6919.855849551832 5122.552684706927 5380.954457481764 4607.064518700261 5177.68000365094 4582.654266440733 5544.536795103554 5289.96242378923 6115.83215954366 0.891684027199375 0.9035098882195864 1.1314659508360616 0.8375888270107713 0.8798401128593545 0.7533013330836767 0.8466026974875777 0.7493100116048106 0.9065874684692568 0.8649620012109598 1.0 12.578333099157302 -4.168487060530675 19.932959854007123 0.9176485558595977 0.8956887833907918 0.0 0.10638965507038922 0.0 0.0 0.014748623145051699 0.0 6.784423338635172e-05 4.168487060530675 -0.02195977246880587 AS(ph)LTPVK ddPTM_A549_PD325901_60min_R1 1 ASLTPVK 7 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 AS(0.841)LT(0.159)PVK 98.009 0.011569 39511000.0 10238.0 10962.0 10226.0 10089.0 11428.0 10613.0 10556.0 11012.0 11256.0 11049.0 11974.0 True False 11277.35422318275 11885.806211142346 10919.997853933444 10712.174616218545 10625.336704459725 10526.571246728936 10957.714356464847 10792.357021253114 10782.949463794403 10351.364254365864 10501.273909439893 1.0739034445187852 1.1318442232477963 1.0398736332472147 1.0200833449919888 1.0118140709488883 1.0024089779494565 1.043465245356056 1.027718838145109 1.0268229889805371 0.9857246219490313 1.0 13.358276731379076 -5.917826382518058 4.8526149436620685 1.0161863092894563 1.102122971932565 0.7493583002364939 0.019414123857088024 0.0649551911506418 2.7154514251398867 0.0024524423386761522 0.008020926683469506 1.208296778193404e-06 5.917826382518058 0.08593666264310862 AS(ph)NLQDLVYK ddPTM_A549_PD325901_60min_R1 1 ASNLQDLVYK 10 0 O95347-2;O95347 O95347-2 SMC2 Structural maintenance of chromosomes protein 2 1 AS(1)NLQDLVYK 49.448 0.029149 596740.0 1071.2 1329.4 1767.6 1187.3 1705.2 1437.3 1160.7 1317.2 1283.5 1715.2 1964.0 True False 1179.9474354242386 1441.433203529705 1887.559965442279 1260.6368244460575 1585.4326346206456 1425.5951053352967 1204.8710736594114 1290.9274126765906 1229.5589584914803 1606.901979282137 1722.440450821776 0.6850439647195268 0.8368551742047149 1.0958636999855202 0.7318899320116454 0.9204571536068117 0.8276600242726218 0.6995139211254402 0.7494757871371921 0.713847005802063 0.9329216452827059 1.0 10.750238390790967 -10.97631836739999 1.2732160323335515 0.9989846075240444 0.803225670294764 0.21772303785837432 0.114913705353914 0.4817446161962961 1.4007499697746277 0.08044154124746083 0.0189504727414685 1.056043073976373e-11 10.97631836739999 -0.1957589372292804 AS(ph)NPDLRR ddPTM_A549_MK2206_60min_R1 1 ASNPDLRR 8 1 Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5;Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q8N4C8-5;Q8N4C8-2;Q8N4C8-3 Q9UKE5-6;Q8N4C8-5 TNIK;MINK1 TRAF2 and NCK-interacting protein kinase;Misshapen-like kinase 1 1 AS(1)NPDLRR 48.981 0.014361 4055800.0 736.16 693.8 746.79 506.36 837.64 531.0 526.96 362.88 953.56 966.37 1006.1 True False 860.4058106160004 729.1114565406004 852.6960513970715 630.4182227313646 714.4242656149986 587.1900675507267 622.7018109192763 414.3193512733919 737.580182522418 748.0663458268866 756.2576030526003 1.1377152535630854 0.9641046299535692 1.127520633121838 0.8336024923077922 0.9446837462939304 0.7764418700460796 0.8233990751375828 0.5478547912788052 0.9753028327189152 0.9891686943805258 1.0 9.562733931288848 -6.256058891918016 24.812042083561906 0.9183174358515053 1.0652126153515986 0.2634759168243256 0.13769319794947696 605.3912808249316 2791738.717467532 0.021387178222934553 0.05479072568705825 5.545505087845466e-07 6.256058891918016 0.14689517950009334 AS(ph)PAHSPR ddPTM_A549_MK2206_60min_R1 2 ASPAHSPR 8 0 A0A669KBK8;Q04724;A0A669KAE5 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 AS(0.992)PAHS(0.008)PR;AS(0.99)PAHS(0.01)PR 58.37 0.004534399999999999 5308200.0 423.09000000000003 395.85 357.3 380.97 400.87 489.41 394.35 382.61 416.90999999999997 528.48 642.18 True False 494.4972484426261 415.99707418794543 407.9705126798344 474.307667102393 341.902554029278 541.1990413559344 465.9982904509198 436.8461391939826 322.48055066846507 409.09600095469955 482.70898273364344 1.024421061406863 0.8617968363300392 0.8451686777599302 0.9825954852058632 0.7082995474686209 1.121170437498499 0.9653814350251184 0.9049886263148996 0.6680641177262042 0.8475002860687115 1.0 8.915009863925585 -8.542791580398601 24.987976848122944 0.8402669227217668 0.9255679543443533 0.09486019884938846 0.12278090763588227 542.0828618027997 680239.3327328946 0.025143260808744534 0.028511517509859943 2.8655528298648018e-09 8.542791580398601 0.08530103162258651 AS(ph)PAHSPR ddPTM_A549_PD325901_60min_R1 2 ASPAHSPR 8 0 A0A669KBK8;Q04724;A0A669KAE5 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 AS(0.984)PAHS(0.016)PR;AS(0.992)PAHS(0.008)PR 58.37 0.004534399999999999 5104300.0 619.8900000000001 358.23 315.78999999999996 565.6600000000001 400.94 439.06 464.32 508.41999999999996 452.56 464.45000000000005 813.54 True False 682.8207764611013 388.4192993082943 337.2214083995346 600.5995334929305 372.7793575679109 435.4844409298793 481.989951685653 498.2791642522256 433.5404770197932 435.12454773646704 713.4797374549635 0.9570289674893572 0.5444013038041073 0.4726432871134211 0.8417891945121171 0.5224806508137754 0.6103669355534685 0.6755481990349829 0.6983788580032073 0.6076423117021725 0.6098625159119296 1.0 9.478728648083564 -10.764934307346026 0.7743004618230723 1.0263972193402626 0.6476667315950275 0.0 0.17611754768624524 0.5092228945817684 0.4794181794713207 0.12241112173691483 0.02372293553571891 1.718168262660685e-11 10.764934307346026 -0.3787304877452351 AS(ph)PALVAK ddPTM_A549_MK2206_60min_R1 1 ASPALVAK 8 0 A6NMU3;Q92783-2;Q92783 A6NMU3 STAM Signal transducing adapter molecule 1 1 AS(1)PALVAK 94.40899999999999 0.0025357 11123000.0 3601.4 3695.8 2943.5 3015.6 4287.1 3335.4 3412.7 3060.7 4755.4 4681.6 4845.7 True False 4209.228274223626 3883.900433961877 3360.9325610777837 3754.4221353754283 3656.4732690870305 3688.3498141406694 4032.7434152956826 3494.5635980006336 3678.309492813361 3624.0233084875927 3642.3789554835357 1.1556261239338397 1.066308717854504 0.922730062454913 1.0307609892494063 1.003869535206455 1.012621108132619 1.1071729396043375 0.9594179081063576 1.0098645796521892 0.9949605334260158 1.0 11.830665313719129 -5.439725795591776 4.009783241277316 1.006340137949357 1.14877892606852 0.5165480843104755 0.04329984295703288 0.1275714706772021 3.546806704814621 0.005391681755404845 0.03651392327107424 3.6330736700684856e-06 5.439725795591776 0.14243878811916288 AS(ph)PALVAK ddPTM_A549_PD325901_60min_R1 2 ASPALVAK 8 0 A6NMU3;Q92783-2;Q92783 A6NMU3 STAM Signal transducing adapter molecule 1 1 AS(1)PALVAK;AS(1)PALVAK 140.16 0.0010942 33982000.0 11072.4 11149.1 11440.0 11516.5 13951.0 12569.7 12490.599999999999 12575.3 13413.1 13362.0 14079.8 True False 12196.461896929935 12088.67378476985 12216.38719430849 12227.848049130822 12971.129888337224 12467.336530670758 12965.936618118574 12324.475776367997 12849.39405231171 12518.32103962681 12348.073859205928 0.9877218128102659 0.9789926690272681 0.9893354488806154 0.9902635980764342 1.0504577504342336 1.009658402826601 1.050037177130424 0.9980889260052217 1.0405990601305022 1.0137873471087118 1.0 13.591998397028101 -6.603695956747084 10.153875885635621 1.0214032851040784 0.9855590714424269 0.5090855287778724 0.017300544455240773 0.259345564220037 30.58912371097641 0.002703079553858929 0.005630357690828819 2.490600341168688e-07 6.603695956747084 -0.03584421366165147 AS(ph)PAPGSGHPEGPGAHLDMNSLDR ddPTM_A549_MK2206_60min_R1 6 ASPAPGSGHPEGPGAHLDMNSLDR 24 0 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 AS(0.939)PAPGS(0.061)GHPEGPGAHLDMNSLDR;AS(0.897)PAPGS(0.103)GHPEGPGAHLDMNSLDR;AS(0.98)PAPGS(0.02)GHPEGPGAHLDMNSLDR;AS(0.995)PAPGS(0.005)GHPEGPGAHLDMNSLDR;AS(0.997)PAPGS(0.003)GHPEGPGAHLDMNSLDR;AS(0.988)PAPGS(0.012)GHPEGPGAHLDMNSLDR 178.91 3.4305e-42 313992000.0 12833.36 16250.869999999999 12248.95 12511.970000000001 16412.03 15435.349999999999 12762.6 14771.29 19611.809999999998 20288.52 21408.629999999997 True False 14999.317422471946 17077.969869922086 13986.03529608076 15577.403211683673 13997.842127884682 17068.708491843892 15081.399218229766 16865.165592678415 15169.766348625144 15705.32924101091 16092.276322870488 0.9320817714989632 1.0612525864753342 0.8691147862160234 0.9680049546219218 0.8698484817832032 1.0606770695072947 0.9371824666468066 1.048028585533887 0.9426737426243257 0.9759544843690233 1.0 13.97408079556947 -7.256614116512289 24.998843598174705 0.9810625574767752 0.9444044542502119 0.14556926418209404 0.06045001746174432 859.3570248809756 4452177.463056792 0.008434489823562489 0.014331323925959323 5.5384199564382184e-08 7.256614116512289 -0.036658103226563266 AS(ph)PAPGSGHPEGPGAHLDMNSLDR ddPTM_A549_PD325901_60min_R1 6 ASPAPGSGHPEGPGAHLDMNSLDR 24 0 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 AS(0.713)PAPGS(0.287)GHPEGPGAHLDMNSLDR;AS(0.963)PAPGS(0.037)GHPEGPGAHLDMNSLDR;AS(0.984)PAPGS(0.016)GHPEGPGAHLDMNSLDR;AS(0.994)PAPGS(0.006)GHPEGPGAHLDMNSLDR;AS(0.998)PAPGS(0.002)GHPEGPGAHLDMNSLDR;AS(0.998)PAPGS(0.002)GHPEGPGAHLDMNSLDR 203.25 4.444699999999999e-62 493735000.0 34030.0 36307.899999999994 34411.6 36185.6 43003.0 40291.4 34609.5 35675.5 36552.600000000006 43222.2 46418.299999999996 True False 37484.700548438064 39367.69415558615 36746.97810976098 38420.702328539766 39982.61763229629 39963.2801969711 35926.58346154507 34963.924165611665 35016.421337090535 40493.14291565321 40709.14336984748 0.9207931546946355 0.9670479626143419 0.9026713673611417 0.9437855761169683 0.9821532540994388 0.981678239551736 0.8825187780334194 0.8588715279012431 0.8601610949894505 0.9946940555287082 1.0 15.313065243152755 -7.752019356412323 24.999732672448545 0.9219532295208652 0.9495475747226231 0.08681489045780011 0.048798607855019695 582.3710193188222 1545545.6552265664 0.009403289837004692 0.01384569508144661 1.770030066697225e-08 7.752019356412323 0.027594345201757853 AS(ph)PATHR ddPTM_A549_MK2206_60min_R1 2 ASPATHR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AS(0.997)PAT(0.003)HR;AS(0.972)PAT(0.028)HR 101.72 0.010864 29115000.0 1762.58 1229.85 935.5999999999999 929.63 1629.92 2148.82 2087.89 2551.5 1809.67 1810.76 2073.69 True False 2060.0604130563324 1292.444111885928 1068.2821485117631 1157.389391732676 1390.1609271419675 2376.206706128726 2467.232586914087 2913.1829386410373 1399.7826344491646 1401.7080583725624 1558.735542067535 1.3216227881246814 0.8291618924475197 0.6853517608861182 0.7425181247856154 0.8918516897985356 1.524445065887753 1.5828423233626308 1.8689398297654383 0.8980244542268327 0.8992597015612485 1.0 10.606160463171433 -7.039212098977551 24.879340010766132 1.1192240215251865 0.8678026298841441 0.16039905918652164 0.3449872336373182 1022.5012815645698 648756.3759217105 0.05817707904291191 0.1007777260759558 9.136669195483884e-08 7.039212098977551 -0.2514213916410424 AS(ph)PATHR ddPTM_A549_PD325901_60min_R1 2 ASPATHR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AS(0.976)PAT(0.024)HR;AS(0.817)PAT(0.183)HR 91.069 0.01245 20788000.0 1208.24 1534.11 1083.21 1229.67 1352.74 680.81 821.21 1065.37 1190.73 1328.99 1685.77 True False 1330.8996353407229 1663.3948336595129 1156.7231444708825 1305.623923116806 1257.7282090996553 675.2657090818361 852.4615959333549 1044.1203595834033 1140.687758975116 1245.0773445931472 1478.4309769764902 0.9002108695412478 1.1251082123977736 0.7823991532134115 0.8831145609427852 0.8507182470376874 0.45674483259462584 0.5765988464856893 0.7062354454441377 0.7715529346577368 0.8421612939546425 1.0 10.529851175061008 -5.775922913367243 24.854157648592174 0.8188132903335823 1.0126595658356052 0.2152582134420482 0.1566149032822853 284.762342607816 488662.9931436483 0.025928142760660255 0.08112864784377968 1.6752402023139138e-06 5.775922913367243 0.19384627550202294 AS(ph)PEPEGEAAGK ddPTM_A549_MK2206_60min_R1 1 ASPEPEGEAAGK 12 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AS(1)PEPEGEAAGK 147.33 5.941e-12 7473600.0 2250.5 2255.8 2175.9 2121.7 2957.8 2667.1 2395.0 2276.2 3263.2 3052.1 3743.7 True False 2630.329380557633 2370.6105846991727 2484.4753387630894 2641.5165952467314 2522.7115381739673 2949.3307517223034 2830.1404986178595 2598.858320570146 2524.0904102596105 2362.6284902244897 2814.03596913629 0.9347177539329599 0.8424236970314144 0.8828868450909132 0.9386932591545694 0.8964745176829638 1.0480785548123392 1.0057229295070143 0.9235341513306284 0.8969645157145335 0.8395871680878513 1.0 11.458425053948297 -6.601873360960703 1.829333576006428 0.9575216244137302 0.8838455608818909 0.13749666481712552 0.05937109159747103 0.3900026263995331 2.609018265898917 0.008240311490311713 0.021711944253818966 2.5010745616242597e-07 6.601873360960703 -0.07367606353183931 AS(ph)PEPEGEAAGK ddPTM_A549_PD325901_60min_R1 2 ASPEPEGEAAGK 12 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AS(1)PEPEGEAAGK;AS(1)PEPEGEAAGK 153.81 2.7519e-13 15957200.0 7443.0 6705.7 7475.4 7876.9 8455.6 10360.7 7669.700000000001 8030.599999999999 8747.5 7808.8 8642.3 True False 8198.607880753001 7270.8128726562 7982.725597231962 8363.438223262145 7861.707826236412 10276.325894279134 7961.574630520882 7870.423383116171 8379.872995250664 7315.751035341854 7579.351888053485 1.0817030270986077 0.9592921637688308 1.053220079386243 1.1034503143262857 1.0372533090366176 1.3558317447269599 1.0504294757800934 1.0384032169718194 1.105618675451519 0.9652211882222916 1.0 12.887858773181508 -4.8936734874614185 20.048765028681125 1.0662781943091022 3.1713808844393645 0.0017072569304735774 0.10218663022772834 6001.4386949266645 1387274.017504554 0.013151140551339513 130791.86598841568 1.2773988255794572e-05 4.8936734874614185 2.1051026901302623 AS(ph)PEPPDSAEGALK ddPTM_A549_MK2206_60min_R1 2 ASPEPPDSAEGALK 14 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 AS(1)PEPPDSAEGALK;AS(1)PEPPDSAEGALK 124.3 3.9575e-21 3565600.0 2159.3 2084.4 1823.3 2305.0 2444.8 1971.5 2576.9 2077.1 3190.6 2828.3 3701.7 True False 2523.7370501835585 2190.4870568077645 2081.871356756625 2869.725103475382 2085.1731586069764 2180.1228214242146 3045.0893740661195 2371.535285851968 2467.9341943412346 2189.3850656603418 2782.4657282773205 0.9070146038226512 0.7872467339117734 0.7482109610908138 1.0313604492271988 0.7493976070993508 0.7835218954427057 1.09438522211427 0.8523142843237219 0.8869594220911327 0.7868506854946362 1.0 11.442148202616078 -7.716251006243218 24.99991495866647 0.9467659511440757 0.8334760104554274 0.13286411109513685 0.10712539553220216 141.93402493501185 78522.89005479024 0.014548681746610342 0.021579132588157576 1.9219805737298165e-08 7.716251006243218 -0.11328994068864828 AS(ph)PEPPGPESSSR ddPTM_A549_MK2206_60min_R1 2 ASPEPPGPESSSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR 259.27 2.5224999999999997e-69 619610000.0 6957.7 6657.700000000001 6608.4 7127.3 10277.4 8413.5 7581.9 7913.6 12157.2 9988.0 9823.6 True False 8131.989660566919 6996.5484926641075 7545.570489766071 8873.488819956652 8765.60807438945 9303.8109855707 8959.433088296753 9035.377034383579 9403.613611059134 7731.703863032736 7384.129002432689 1.1012794681522828 0.9475116821982804 1.0218633080868704 1.2016974266068883 1.1870876133802153 1.2599740582139851 1.2133364795421482 1.2236212329723504 1.2734898872922087 1.0470705293048834 1.0 12.850212042080253 -6.248425216476861 21.65755674057579 1.1618569214809475 1.0159473657379083 0.3728403952388717 0.0864193339394447 146.8071930338333 244304.09622090534 0.015785163945724028 0.04135651784888474 5.64384117341509e-07 6.248425216476861 -0.1459095557430392 AS(ph)PEPPGPESSSR ddPTM_A549_PD325901_60min_R1 3 ASPEPPGPESSSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR 250.81 1.1914999999999997e-68 770756360.0 8404.56 8347.650000000001 8223.61 8717.01 9495.9 8160.53 7526.120000000001 8094.85 10131.039999999999 10359.02 10271.12 True False 9257.784744089933 9051.135761580223 8781.713627184201 9255.439909933906 8828.940743076579 8094.073349295096 7812.53061505089 7933.391866463026 9705.267620440616 9704.949709318591 9007.837353994175 1.027747769000839 1.0048067483774947 0.9748970015861013 1.0274874585551816 0.980139893307657 0.8985590027006976 0.8673036943308848 0.8807210382129371 1.077424828961548 1.0773895362370536 1.0 13.136965062934534 -8.778824902190292 24.99765745585396 1.0365617223301382 0.9579393728518754 0.34607585167696253 0.05645926659766681 253.61699438869647 364660.1036034034 0.011088868601905893 0.011818194054735507 1.6640834363149314e-09 8.778824902190292 -0.07862234947826285 AS(ph)PEPQR ddPTM_A549_MK2206_60min_R1 2 ASPEPQR 7 0 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 AS(1)PEPQR;AS(1)PEPQR 95.60799999999999 0.011874 71729000.0 8457.3 7538.299999999999 6407.3 4293.6 3724.5 2557.2 2075.1 2629.1 3359.1 9972.099999999999 9333.8 True False 9884.685478866953 7921.96727131739 7315.951485848037 5345.5321927470295 3176.6309838153147 2827.801206668021 2452.1188094705294 3001.782976281069 2598.2692133804417 7719.395684075768 7015.959860224988 1.4088856943018444 1.129135204468423 1.0427584580869351 0.7619103158004112 0.4527721148782978 0.4030526489610417 0.34950582077473497 0.4278506485333295 0.3703369553338808 1.100262236082437 1.0 12.776424778508016 -6.048113974339921 1.5977555485154629 0.6108490109937518 1.3209160015288677 0.553838507372757 0.2435498694180343 0.28752506057336247 1.3378207381322287 0.041237915857024084 0.19712180664656342 8.951298207760126e-07 6.048113974339921 0.7100669905351159 AS(ph)PEPQR ddPTM_A549_PD325901_60min_R1 3 ASPEPQR 7 0 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 AS(1)PEPQR;AS(1)PEPQR;AS(1)PEPQR 98.23299999999999 0.011541 200844000.0 9332.9 9144.8 9250.5 7936.3 9503.1 7469.299999999999 7228.45 6875.6 8587.1 9482.8 9639.8 True False 10280.369137482156 9915.464389678395 9878.294557775407 8426.507226354965 8835.635039915238 7408.472497238521 7503.53262030961 6738.4607641961475 8226.214049444638 8884.054389655224 8454.165711726971 1.2160122581015906 1.172849542791008 1.168452913582353 0.996728419300601 1.045122054759244 0.8763103007269014 0.8875544762390077 0.797058041439745 0.9730367643532067 1.0508493318662946 1.0 13.04544667585072 -6.298356626056912 1.572062794837935 0.9580608527870279 1.204879093761188 0.681948305436677 0.07140197933794318 0.19724301002849673 0.9144483994069056 0.01101510485959031 0.04031634979054449 5.030873230108119e-07 6.298356626056912 0.24681824097416005 AS(ph)PEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A549_MK2206_60min_R1 3 ASPEPQRENASPAPGTTAEEAMSR 24 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 2 AS(1)PEPQRENAS(0.995)PAPGT(0.003)T(0.002)AEEAMSR;AS(1)PEPQRENAS(0.992)PAPGT(0.004)T(0.004)AEEAMS(0.001)R;AS(0.995)PEPQRENAS(0.963)PAPGT(0.015)T(0.014)AEEAMS(0.013)R 78.642 6.5625e-06 50687000.0 1287.31 1389.04 1171.44 1277.92 2173.74 1859.7 1399.59 1553.92 2646.76 2484.17 2178.7200000000003 True False 1504.5764562922236 1459.7362029304638 1337.5678068112666 1591.010457368009 1853.9857255359668 2056.49221963105 1653.8773864135976 1774.1929186804157 2047.27308600721 1922.9942716690061 1637.6836943870005 0.9187222547608009 0.8913419654439779 0.816743679744537 0.9715004569081567 1.1320780269659643 1.2557322434603668 1.0098881683209642 1.08335506102997 1.2501028696958008 1.1742159235387637 1.0 10.67744102344507 -6.601667685586426 3.6623139488488152 1.1209031662289877 0.878278834829062 0.6595277795518646 0.08110758319233624 0.13840053664793256 3.6700029164724364 0.014859059337496185 0.03282017439246104 2.502259313665885e-07 6.601667685586426 -0.24262433139992567 AS(ph)PEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A549_PD325901_60min_R1 4 ASPEPQRENASPAPGTTAEEAMSR 24 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 2 AS(0.999)PEPQRENAS(0.947)PAPGT(0.025)T(0.024)AEEAMS(0.006)R;AS(0.999)PEPQRENAS(0.989)PAPGT(0.005)T(0.006)AEEAMS(0.001)R;AS(0.995)PEPQRENAS(0.801)PAPGT(0.08)T(0.073)AEEAMS(0.051)R;AS(1)PEPQRENAS(0.93)PAPGT(0.032)T(0.029)AEEAMS(0.01)R 57.427 0.0014175000000000001 88299000.0 2569.72 2660.8399999999997 2255.17 2030.4499999999998 3328.2099999999996 2820.23 2277.81 3014.74 2553.12 2454.38 3106.44 True False 2830.5960826721207 2885.0783250187906 2408.2193976388703 2155.8662850134738 3094.4480113011828 2797.262981924276 2364.493306015459 2954.6086456822213 2445.8212451139616 2299.410027932889 2724.3675733456207 1.0389919885869319 1.0589901132451858 0.8839553888396531 0.7913272445707438 1.1358408614080993 1.0267568184601232 0.8679053917499747 1.0845117503927182 0.8977574351725255 0.8440160756682078 1.0 11.411705650445013 AS(ph)PEPQRENASPAPGTTAEEAMSR ddPTM_A549_MK2206_60min_R1 3 ASPEPQRENASPAPGTTAEEAMSR 24 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 AS(0.995)PEPQRENAS(0.005)PAPGTTAEEAMSR;AS(1)PEPQRENASPAPGTTAEEAMSR;AS(1)PEPQRENASPAPGTTAEEAMSR 210.51 1.8279999999999997e-74 105041000.0 5142.1 5438.2 5703.1 5338.7 8955.3 6934.799999999999 5985.9 6391.4 9785.099999999999 7845.8 8479.8 True False 6009.96076772513 5714.981151569748 6511.885336871999 6646.681739663346 7637.987233014177 7668.635933052316 7073.460547255381 7297.400522841591 7568.790473593806 6073.428330855247 6374.031629425941 0.9428821689525252 0.8966038268756523 1.0216273962008051 1.0427751423414195 1.1982976673277146 1.2031060369468185 1.1097310083308187 1.144864184412403 1.187441624646514 0.9528393776424094 1.0 12.637990462783616 -6.103761486091754 2.0101756298521236 1.1107710873843097 0.9198864633174823 0.4657872067921749 0.0771759280125155 0.23851680295997746 1.8358640689908616 0.011921267358807821 0.04513927895923827 7.874781528327491e-07 6.103761486091754 -0.1908846240668275 AS(ph)PEPQRENASPAPGTTAEEAMSR ddPTM_A549_PD325901_60min_R1 4 ASPEPQRENASPAPGTTAEEAMSR 24 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 AS(1)PEPQRENASPAPGTTAEEAMSR;AS(1)PEPQRENASPAPGTTAEEAMSR;AS(1)PEPQRENASPAPGTTAEEAMSR;AS(1)PEPQRENASPAPGTTAEEAMSR 188.16 5.337399999999999e-51 181306000.0 13029.300000000001 11747.9 13255.0 15051.6 15833.499999999998 14206.0 14909.3 15010.7 14639.3 16173.600000000002 15321.900000000001 True False 14352.024944336288 12737.93676225864 14154.564008790116 15981.303147336203 14721.409582609653 14090.31104598429 15476.681570181998 14711.299812833657 14024.061130537068 15152.39613579616 13437.403433526577 1.0680653457592644 0.9479462922484894 1.0533704728604196 1.1893148275553407 1.0955546326665653 1.0485888226611324 1.151761324034328 1.0948022722997721 1.0436585609647449 1.1276282810703326 1.0 13.713966766514028 -9.310036773958727 1.4088103209051717 1.0122200561229961 1.0802224650441123 0.0 0.06804465502049527 0.45520075260896425 1.8703705492393785 0.014157983076813003 0.012126230196286577 4.897373490198373e-10 9.310036773958727 0.0680024089211162 AS(ph)PFEEDQNR ddPTM_A549_MK2206_60min_R1 2 ASPFEEDQNR 10 0 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 1 AS(1)PFEEDQNR;AS(1)PFEEDQNR 202.65 1.3636e-19 22065000.0 2398.05 2964.35 2888.15 2385.97 3316.98 2532.56 2863.55 2997.48 4068.5 3621.7 4078.6 True False 2802.782213306479 3115.2227532374286 3297.7330987860714 2970.5327571102625 2829.056635976837 2800.5538182227297 3383.81996860842 3422.3819693975033 3146.991246059459 2803.555454620109 3065.771056366501 0.9142177161227063 1.0161302641200929 1.0756618932577724 0.9689349604046712 0.9227879655598895 0.9134908532739224 1.1037418993115764 1.1163201382211663 1.026492581539738 0.914469933688667 1.0 11.58203424905043 -7.751550881916896 24.99979278070057 1.028485746500321 0.9735084716184552 0.18064668944952667 0.06684876852117397 308.25292494759447 779312.1455870178 0.009653755459614864 0.014224574749576025 1.7719404325327238e-08 7.751550881916896 -0.05497727488186577 AS(ph)PFEEDQNR ddPTM_A549_PD325901_60min_R1 2 ASPFEEDQNR 10 0 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 1 AS(1)PFEEDQNR;AS(1)PFEEDQNR 196.67 2.9581e-19 30830000.0 5393.6 5977.4 5571.5 5648.1 6977.2 5533.5 5874.5 5713.8 6357.4 6183.1 6914.7 True False 5941.154301441539 6481.136475687121 5949.6154941511995 5996.970309234211 6487.1455420332895 5488.43701062608 6098.057312149747 5599.833776610617 6090.220586454021 5792.698010785555 6064.235735894776 0.9797037186854881 1.0687474494641873 0.9810989798656526 0.9889078476513677 1.0697383519633432 0.9050500755007777 1.005577219905021 0.9234195404813635 1.0042849341105655 0.9552230920869446 1.0 12.56611012134985 AS(ph)PGGVSTSSSDGK ddPTM_A549_MK2206_60min_R1 2 ASPGGVSTSSSDGK 14 0 P54259 P54259 ATN1 Atrophin-1 1 AS(1)PGGVSTSSSDGK;AS(0.973)PGGVS(0.017)T(0.006)S(0.002)S(0.001)S(0.001)DGK 91.845 6.3576e-05 18331300.0 3777.1 4454.4 4257.299999999999 4517.4 5186.6 4409.6 3861.0 4839.7 6966.3 5596.8 6327.4 True False 4414.582138771048 4681.109933719298 4861.049156540326 5624.163202793793 4423.658010647475 4876.22094514442 4562.493722406491 5525.74229595964 5388.444172895175 4332.478992853583 4756.131952643895 0.9281874814926063 0.9842262536717695 1.0220593551526906 1.1825078149203507 0.9300957279346297 1.0252492978950611 0.9592866152231622 1.1618143379911747 1.1329467362443095 0.9109248935882011 1.0 12.215573025982874 -8.235269689354908 24.96129860291996 1.0719621210868067 1.009191393842425 0.04040106491736628 0.09009975011953225 1302.1985099074514 1242071.3470169497 0.013480943334558779 0.01740042300570657 5.817418539617499e-09 8.235269689354908 -0.0627707272443816 AS(ph)PGGVSTSSSDGK ddPTM_A549_PD325901_60min_R1 2 ASPGGVSTSSSDGK 14 0 P54259 P54259 ATN1 Atrophin-1 1 AS(1)PGGVSTSSSDGK;AS(1)PGGVSTSSSDGK 148.7 1.2388e-34 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)PGLLPVANGNSLNK ddPTM_A549_MK2206_60min_R1 2 ASPGLLPVANGNSLNK 16 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 AS(1)PGLLPVANGNSLNK;AS(1)PGLLPVANGNSLNK 159.22 2.3708999999999998e-20 56268000.0 4587.6 6690.700000000001 5786.700000000001 5382.3 8195.8 6696.3 6459.5 6338.7 9316.1 8946.5 9296.9 True False 5361.874723948549 7031.22805170971 6607.341073955776 6700.9637416206315 6990.208676910609 7404.898021355804 7633.1075368776865 7237.230136454612 7206.018224754712 6925.479436385901 6988.223148613181 0.7672729690969611 1.0061539109702102 0.9454965780918155 0.9588937844594221 1.0002841249134726 1.0596252958558303 1.0922815964158905 1.0356323750037728 1.0311660162404448 0.9910215070565209 1.0 12.770709961928999 -4.4645213526179335 0.9915496799460368 1.0207384805793407 7.426700853789972e-31 0.7398602122559059 0.04129540142011528 3.0477290645217545 0.730289246434469 0.006271356440853753 4.861431580484061 3.431457682014699e-05 4.4645213526179335 -1.0207384805793407 AS(ph)PGLLPVANGNSLNK ddPTM_A549_PD325901_60min_R1 2 ASPGLLPVANGNSLNK 16 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 AS(1)PGLLPVANGNSLNK;AS(1)PGLLPVANGNSLNK 195.38 3.7758999999999995e-39 86183000.0 7832.6 9519.1 8980.099999999999 9442.400000000001 11319.900000000001 10596.0 10248.3 10642.8 10044.599999999999 11244.0 10589.4 True False 8627.75978594464 10321.307964284357 9589.543587728114 10025.635602753684 10524.82927553498 10509.709689092599 10638.304664584935 10430.521004884917 9622.460393037412 10534.051921086952 9286.970931737329 0.92901763657514 1.111375069454808 1.0325803384348682 1.0795377391019971 1.1332897833853866 1.131661740554897 1.1455085563183527 1.1231348823586402 1.0361247454919429 1.1342828569741554 1.0 13.18099240394453 -8.954448813442857 4.135933036927799 1.0150702458189573 1.0896786917095937 0.0 0.06884562287393632 0.22158648052476182 7.4959215505897605 0.010530458871494975 0.01090000873602086 1.1105834225410298e-09 8.954448813442857 0.07460844589063642 AS(ph)PIKMDLAPSK ddPTM_A549_MK2206_60min_R1 9 ASPIKMDLAPSK 12 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(0.996)PIKMDLAPS(0.004)K;AS(1)PIKMDLAPSK;AS(0.999)PIKMDLAPS(0.001)K;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(0.999)PIKMDLAPS(0.001)K;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK 101.3 0.00019029 407397100.0 28860.5 30319.9 31037.5 28006.100000000002 44767.90000000001 36915.2 31701.0 36317.2 49837.00000000001 39484.5 41738.1 True False 33731.4468285197 31863.053403236318 35439.084207389766 34867.595757241594 38182.60121367856 40821.54196167345 37460.661355609496 41465.27431676041 38548.999073335464 30564.924026823788 31373.3778570418 1.0751614627606516 1.0156079956842967 1.1295909662285666 1.1113752531245376 1.2170382605170587 1.3011522746350055 1.1940270354791076 1.3216707013731221 1.228716883753819 0.9742312149523118 1.0 14.937253246800868 -5.895802237795651 4.170086057437075 1.152490706758184 1.0458208184218112 0.15488438659859394 0.10492970709472328 0.3791776728625501 11.864662350423174 0.016733135465378357 0.056895852245204555 1.2711528110522393e-06 5.895802237795651 -0.10666988833637281 AS(ph)PIKMDLAPSK ddPTM_A549_PD325901_60min_R1 12 ASPIKMDLAPSK 12 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(0.997)PIKMDLAPS(0.003)K;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK 110.12 9.7848e-06 705360300.0 63900.100000000006 65102.700000000004 68937.69999999998 60889.700000000004 77247.59999999999 63212.4 65314.50000000001 69160.2 69697.90000000001 68651.0 72876.3 True False 70387.19111123266 70589.13300694554 73616.22687806637 64650.71847845789 71821.99506575288 62697.61917240445 67800.07903896578 67780.74555587283 66768.7396439762 64316.3641439471 63912.97710092828 1.101297331214608 1.104456969599063 1.1518197120095843 1.0115429042894468 1.1237466681036477 0.9809841759271424 1.0608186649152516 1.0605161679268478 1.0446820453777053 1.0063115045068518 1.0 15.963821270007127 -2.000000000023345 0.1197744212197043 0.9803908796137869 1.425628179505471 0.42310484542252547 0.04062478488580606 54.71348698850852 0.43443078219122966 0.13539030468133373 4.089775874099616 0.009999999999462465 2.000000000023345 0.44523729989168415 AS(ph)PIQPALDPSR ddPTM_A549_MK2206_60min_R1 2 ASPIQPALDPSR 12 0 Q99500 Q99500 S1PR3 Sphingosine 1-phosphate receptor 3 1 AS(1)PIQPALDPSR;AS(1)PIQPALDPSR 160.87 5.3116999999999996e-14 32514000.0 7268.4 7195.5 5556.3 5669.4 7955.5 6397.0 5215.8 5653.3 9246.7 9568.9 8922.0 True False 8495.12822468123 7561.7202155345785 6344.26688945694 7058.40325450904 6785.256488587126 7073.926294015068 6163.4433455912385 6454.672587505142 7152.337213945687 7407.27884411033 6706.4211653268085 1.266715587234858 1.1275343479216295 0.9459988767567626 1.0524843400832073 1.011755200175603 1.0547989933272184 0.9190361287562961 0.9624615615966315 1.066490910371739 1.1045054674476844 1.0 12.71132737233432 -5.458871776964606 3.3266317130464924 1.0173464854174863 1.2617841157870031 0.6682950556919025 0.05372271267401883 0.10689687970815426 2.1127272109395134 0.006799348650714649 0.05017055590239366 3.4763878471473375e-06 5.458871776964606 0.24443763036951682 AS(ph)PIQPALDPSR ddPTM_A549_PD325901_60min_R1 1 ASPIQPALDPSR 12 0 Q99500 Q99500 S1PR3 Sphingosine 1-phosphate receptor 3 1 AS(1)PIQPALDPSR 188.13 2.0203999999999999e-19 21046000.0 4451.2 4830.6 5039.9 5067.0 5200.1 4500.2 4651.9 4634.3 5158.7 5275.9 6319.6 True False 4903.082547199752 5237.691614992176 5381.937921380708 5379.977082008061 4834.86291537111 4463.551863236555 4828.930600117354 4541.865250961983 4941.897778862489 4942.7787736092705 5542.329263245062 0.8846609997921654 0.945034364834088 0.9710606616376949 0.9707068682631925 0.8723521620114416 0.8053566742844727 0.8712817970129025 0.8194867239451411 0.8916644147498705 0.8918233722395714 1.0 12.436276706838353 -10.501064665993457 0.9683416330044862 0.9960003248966898 0.8938637639997091 0.0018291939667873791 0.05981460999643461 0.4898250775478079 0.8658756161002987 0.03142649382642421 0.010484745653073354 3.154534881463797e-11 10.501064665993457 -0.10213656089698064 AS(ph)PITNDGEDEFVPSDGLDKDEYTFSPGK ddPTM_A549_PD325901_60min_R1 1 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 AS(0.853)PIT(0.132)NDGEDEFVPS(0.015)DGLDKDEYTFSPGK 96.338 3.6533e-13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)PLLSDK ddPTM_A549_MK2206_60min_R1 2 ASPLLSDK 8 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637;A0A590UJM5 DOCK4 Dedicator of cytokinesis protein 4 1 AS(1)PLLSDK;AS(1)PLLSDK 89.171 0.002667 12642300.0 3425.8999999999996 4393.9 3843.5 2911.7 5370.9 4179.299999999999 4053.4 4192.2 6893.5 5322.7 5433.700000000001 True False 4004.108164786671 4617.530742135694 4388.566094276362 3625.0666307111815 4580.84772478821 4621.550752005184 4789.850311940553 4786.457188074057 5332.133256657463 4120.298373224306 4084.36232750911 0.9803508708857906 1.1305389610112633 1.0744801127751007 0.8875477589966817 1.1215576282092208 1.1315232051960689 1.1727290401441177 1.17189828038423 1.3054995686216013 1.0087984470606728 1.0 11.995895139348429 -6.979207015951123 24.71259852555782 1.1505030531811813 1.0270548125570187 0.22395168628587447 0.09661021653485885 276.90768601731685 329104.64119258034 0.017334351042752296 0.032756534353750255 1.0490422605459762e-07 6.979207015951123 -0.1234482406241626 AS(ph)PNLIGATGANSLGK ddPTM_A549_MK2206_60min_R1 2 ASPNLIGATGANSLGK 16 0 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 AS(1)PNLIGATGANSLGK;AS(1)PNLIGATGANSLGK 184.32 4.6329e-34 14048100.0 5292.6 6020.6 6141.700000000001 5938.0 7582.5 6325.0 6447.799999999999 5925.5 9668.0 8874.4 9933.3 True False 6185.8614883534065 6327.022823938221 7012.685412050772 7392.810266566953 6467.12429447701 6994.307301804803 7619.281798324941 6765.457771082679 7478.213436623533 6869.666876461522 7466.587464866712 0.8284723801147934 0.8473781166710228 0.939208901663346 0.9901190204163668 0.8661419055100369 0.9367475215037422 1.0204503508700216 0.9060977056676655 1.00155706630526 0.9200544303252403 1.0 12.866233307809827 -2.1112373822513346 0.23777630908070918 1.0072019254400715 2.6898631390275003e-18 0.36644696700664314 0.05020697561221982 21.19744859250554 0.26576428839221017 0.02245928356730364 8.440162364347715 0.00774038598203673 2.1112373822513346 -1.0072019254400715 AS(ph)PNLIGATGANSLGK ddPTM_A549_PD325901_60min_R1 2 ASPNLIGATGANSLGK 16 0 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 AS(1)PNLIGATGANSLGK;AS(1)PNLIGATGANSLGK 170.89 5.5582e-28 28150000.0 5225.6 5377.4 5530.9 5456.0 6266.2 5659.8 5065.4 6531.9 5529.6 6077.1 6700.0 True False 5756.099065116605 5830.572369986938 5906.260134003564 5793.004728524965 5826.083729216445 5613.708465300708 5258.166568893237 6401.616130323579 5297.210141701982 5693.390868875625 5875.942474799341 0.9796043936446419 0.9922786676338331 1.0051596249170665 0.985885201117935 0.9915147662189123 0.9553715832611878 0.8948635204385318 1.0894620152900985 0.9015081690163889 0.9689323701335333 1.0 12.520604556708772 -7.2570227554096425 21.607613975240657 0.9589700815759977 0.9914806452039134 0.031121850450061106 0.04917078326225873 125.38157572296892 613397.5510366956 0.007824055976810762 0.013228087833387065 5.533211164952162e-08 7.2570227554096425 0.03251056362791571 AS(ph)PNSDEDKPEVPPR ddPTM_A549_MK2206_60min_R1 3 ASPNSDEDKPEVPPR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 AS(0.991)PNS(0.009)DEDKPEVPPR;AS(0.998)PNS(0.002)DEDKPEVPPR;AS(0.962)PNS(0.038)DEDKPEVPPR 130.11 7.7206e-10 33314800.0 15163.2 15583.6 14986.1 13492.899999999998 19314.4 13913.5 14251.1 15313.2 19748.2 20059.6 21748.0 True False 17722.377455352824 16376.738677062702 17111.35432429686 16798.661105719297 16473.277345630973 15385.817334966185 16840.340400773675 17483.892994708174 15275.264231395211 15528.122428002742 16347.371385734968 1.0841117533316527 1.001796453425739 1.046734298777145 1.027606256035642 1.0077019085775387 0.941179898096164 1.0301558582971255 1.0695232023642012 0.9344171531286493 0.949884973039328 1.0 13.996771052358847 -5.458622682090418 0.3665001010904917 0.9745646946219961 1.1151017569670372 0.2827260288114709 0.04062541936822786 5.238307481495611 0.5236593992142282 0.012719420749117563 0.31538432904515984 3.4783823435436194e-06 5.458622682090418 0.14053706234504104 AS(ph)PNSDEDKPEVPPR ddPTM_A549_PD325901_60min_R1 3 ASPNSDEDKPEVPPR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 AS(0.98)PNS(0.02)DEDKPEVPPR;AS(0.979)PNS(0.021)DEDKPEVPPR;AS(0.993)PNS(0.007)DEDKPEVPPR 95.666 1.2800000000000001e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)PPAESMSVYR ddPTM_A549_MK2206_60min_R1 3 ASPPAESMSVYR 12 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 AS(0.999)PPAES(0.001)MSVYR;AS(0.999)PPAESMSVYR;AS(0.997)PPAES(0.001)MS(0.002)VYR 59.975 0.0033738 36427000.0 8778.2 9232.099999999999 8134.6 8299.099999999999 12261.3 8773.2 8331.7 8943.7 12294.3 13427.2 12473.7 True False 10259.745553615203 9701.974456512653 9288.20859906348 10332.37987256075 10457.679012445893 9701.574200821158 9845.462042728355 10211.496863932529 9509.660679962843 10393.986194404595 9376.13603339352 1.0942402624145668 1.0347518873402268 0.9906222100429343 1.1019869843783756 1.1153506066038728 1.034709198572693 1.0500553754407262 1.0890943590796713 1.0142409032989461 1.1085575291768333 1.0 13.194777785872605 -8.87787521554084 6.4176549078486325 1.0062421804097794 1.0619117334399222 0.0 0.04619084089756351 0.177467418877664 9.337733505459568 0.006113714290287979 0.006483834705526994 1.3247221087289692e-09 8.87787521554084 0.05566955303014276 AS(ph)PPAESMSVYR ddPTM_A549_PD325901_60min_R1 1 ASPPAESMSVYR 12 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 AS(0.992)PPAES(0.002)MS(0.006)VYR 142.51 1.0152999999999998e-11 13779000.0 4945.6 5594.6 4732.6 4833.7 5881.5 5050.9 4900.5 5627.7 5343.3 5975.4 6381.6 True False 5447.673671241708 6066.07657625041 5053.782695435693 5132.266670870805 5468.4037300734935 5009.767145020556 5086.991209156494 5515.45110865476 5118.739682826278 5598.112224231854 5596.703656295446 0.9733718284536823 1.0838659591038002 0.9029927267546051 0.9170159769130852 0.9770758049557199 0.8951281777060547 0.9089263111929103 0.9854820707633342 0.9145990206339528 1.0002516781346504 1.0 12.450361644167737 -5.765707963984846 24.999996931168333 0.9484378995572137 1.0286188920175445 0.3392093545289582 0.04496561812048479 86.81525202599207 508469.638198665 0.006335192782683935 0.020760707155237684 1.7151102247360275e-06 5.765707963984846 0.08018099246033084 AS(ph)PPDPK ddPTM_A549_MK2206_60min_R1 2 ASPPDPK 7 0 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 AS(1)PPDPK;AS(1)PPDPK 57.598 0.034783999999999995 7515900.0 4563.799999999999 4825.3 4454.2 3781.7 6525.8 4477.9 3741.0 4248.2 6886.4 6910.5 6505.0 True False 5334.057865802677 5070.887159477312 5085.872537303437 4708.216669766964 5565.863464674986 4951.748405810548 4420.691275711653 4850.395359566863 5326.641395321092 5349.413250449313 4889.628971133252 1.0908921509777503 1.037069926862375 1.040134653841578 0.9628985547907036 1.138299755980259 1.0127043248156515 0.904095444012204 0.9919761577416177 1.0893753752621758 1.094032549715014 1.0 12.255509281165903 -3.833556765153704 15.54134162744012 1.0327968183024894 1.035452701312629 0.0 0.06475440710435461 0.0 0.0 0.008355735627934017 0.0 0.00014670443220049886 3.833556765153704 0.002655883010139526 AS(ph)PPDPK ddPTM_A549_PD325901_60min_R1 2 ASPPDPK 7 0 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 AS(1)PPDPK;AS(1)PPDPK 80.165 0.015992 15354100.0 9476.5 9438.9 9529.0 9052.0 9818.400000000001 9569.1 9360.3 9653.8 9278.9 10951.8 11818.7 True False 10438.547303769425 10234.34922882243 10175.69524253195 9611.121481416416 9128.789455641177 9491.172422224989 9716.51133865269 9461.247385740411 8888.940101243947 10260.301478954121 10365.074824912084 1.0070884658430783 0.9873878772418063 0.9817290675099647 0.9272602121806619 0.880725861592476 0.9156877863933309 0.9374279976541419 0.9128006835995668 0.8575857146616732 0.9898916942011703 1.0 13.339442910771496 -6.199180827401042 3.6188751613554055 0.9249803167136436 0.9945195117282659 0.350017652908981 0.039256837327047114 0.26600534524313524 6.946788677512771 0.007333858677031488 0.020666907559550158 6.321485885625762e-07 6.199180827401042 0.06953919501462236 AS(ph)PPGDLQNPK ddPTM_A549_MK2206_60min_R1 3 ASPPGDLQNPK 11 0 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 AS(1)PPGDLQNPK;AS(1)PPGDLQNPK;AS(1)PPGDLQNPK 155.88 3.6031e-13 87584000.0 17372.8 17350.5 15770.5 14648.7 22718.0 18327.7 16380.699999999999 18838.1 24735.0 20437.7 22897.0 True False 20304.903915819446 18233.56634002262 18006.99403923127 18237.632157605134 19376.21229435263 20267.12504905736 19356.861154784772 21508.458364261696 19132.561993678442 15820.8093754009 17211.042974948203 1.179760224024457 1.0594108890764358 1.046246532847639 1.0596471221500754 1.125801168619239 1.1775651875692532 1.124676824231974 1.2496894229808537 1.111644542490954 0.919224325825525 1.0 14.071046905701127 -10.2938656380628 0.9833073357039329 1.0082418194485747 1.1227364271716902 0.4665179298545672 0.06414711238595273 0.41776601462153384 0.7913719724781785 0.027680787245170042 0.011456850811441998 5.083166811460148e-11 10.2938656380628 0.11449460772311548 AS(ph)PPGDLQNPK ddPTM_A549_PD325901_60min_R1 2 ASPPGDLQNPK 11 0 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 AS(1)PPGDLQNPK;AS(1)PPGDLQNPK 155.88 3.6031e-13 116949000.0 29466.0 32422.0 32160.0 35092.0 38801.0 32721.0 31695.0 32257.0 34983.0 36976.0 44397.0 True False 32457.366628277305 35154.31572501888 34342.5709937903 37259.55314028555 36075.75161618324 32454.531024612956 32901.17056916948 31613.608829873036 33512.786166659505 34641.32904963638 38936.45045577111 0.8335984982798172 0.9028639055054992 0.8820159668329522 0.9569324554278416 0.9265290285554557 0.8335256718246279 0.8449966595322485 0.811928371996408 0.8607047066277271 0.8896889327132254 1.0 15.24883374991308 -10.651287622377302 0.9617724216280061 0.9987169504364783 0.8743915964985688 0.11025385173888758 0.05189130618035882 0.3500080346437299 0.5855409660678834 0.029038557116996676 0.00810241673430389 2.232093473513661e-11 10.651287622377302 -0.12432535393790956 AS(ph)PPHSK ddPTM_A549_MK2206_60min_R1 1 ASPPHSK 7 0 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 AS(1)PPHSK 65.305 0.007723399999999999 4624900.0 988.37 669.08 452.3 302.78 841.37 659.38 698.17 667.64 780.28 711.82 916.05 True False 1155.182692673516 703.1333141282573 516.4429411841285 376.96111359231077 717.6055875560995 729.1551539389798 825.0184517411394 762.2800145617487 603.5478258511185 551.0193676195395 688.5695033061667 1.6776559041998025 1.021150821742994 0.7500229660251109 0.5474554301088443 1.042168704989861 1.0589419810751726 1.1981629273149814 1.1070487596410543 0.8765241895744489 0.8002378336156624 1.0 9.42745847523779 -8.767322636532462 24.928079360837348 0.9416919847340128 1.0275241766139205 0.05137233006096853 0.26874862554879725 567.8003581618391 2405832.6472686725 0.04706171053082561 0.05075296000623979 1.708745419772655e-09 8.767322636532462 0.08583219187990765 AS(ph)PPLFQSR ddPTM_A549_PD325901_60min_R1 1 ASPPLFQSR 9 0 O15055 O15055 PER2 Period circadian protein homolog 2 1 AS(1)PPLFQSR 94.801 0.00093782 17039000.0 3809.9 3259.6 4062.5 3707.9 4426.6 3326.5 4070.9 4901.9 4313.5 4159.3 4929.8 True False 4196.67824329986 3534.2979315671946 4338.205679797046 3936.9285617481155 4115.690886940973 3299.4100868975584 4225.820327181954 4804.127759033843 4132.218595600316 3896.681088169422 4323.4658525769855 0.9706745436183902 0.8174686818586967 1.003409261856729 0.9105955027727406 0.9519424987450359 0.7631400823788067 0.9774149886399981 1.111175136533196 0.9557652902791687 0.901286426455021 1.0 12.077972579372167 -7.970611282715741 24.999348290628927 0.9910926874090062 0.9031526064354138 0.2317938480215519 0.07851116039975511 217.21028803372673 184768.34495534713 0.01099709867526531 0.015194561275316733 1.0700121700856452e-08 7.970611282715741 -0.0879400809735924 AS(ph)PPPQGPLPGPPGALHR ddPTM_A549_MK2206_60min_R1 2 ASPPPQGPLPGPPGALHR 18 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR 158.33 3.6074e-23 266570000.0 4074.4 5240.799999999999 5625.1 5095.1 6717.0 4904.1 4538.200000000001 4740.7 7406.1 8943.0 9302.5 True False 4762.059110483906 5507.534334733322 6422.82376399479 6343.399728727732 5728.938197956098 5423.0486069218805 5362.732196587714 5412.708742784855 5728.630175111456 6922.770088816756 6992.432514061044 0.6810303997797488 0.7876421150519868 0.9185392567006073 0.9071806865453224 0.819305468652834 0.7755596633956355 0.766933708091401 0.774080941346301 0.8192614177672485 0.9900374547621011 1.0 12.77157870957388 -10.449639469626666 0.7601995957787494 1.002226328637524 0.8085967269334232 0.5715714147288229 0.06287484379248329 0.4266661710174091 0.44003490005357093 0.04727903297237923 0.0133434170259219 3.551080605237773e-11 10.449639469626666 -0.1936296017041007 AS(ph)PPPQGPLPGPPGALHR ddPTM_A549_PD325901_60min_R1 4 ASPPPQGPLPGPPGALHR 18 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR 167.36 3.1549e-25 475372000.0 6633.299999999999 6399.0 6668.199999999999 6953.0 6622.700000000001 6774.3 6253.799999999999 7016.0 6938.4 6126.89 8027.900000000001 True False 7306.707732822633 6938.266187292456 7120.744151144037 7382.471018591288 6157.544399074684 6719.132346812007 6491.7917812106725 6876.060376054472 6646.803176935945 5740.037119778414 7040.519193050993 1.0378080838177914 0.9854764964124435 1.0113947502866303 1.0485691205668188 0.8745866931450444 0.9543518258488387 0.9220615132500576 0.9766410952818875 0.9440785536805799 0.8152860552448806 1.0 12.78146610693672 AS(ph)PRPLAR ddPTM_A549_PD325901_60min_R1 1 ASPRPLAR 8 1 Q8N5Z5-2;Q8N5Z5 Q8N5Z5-2 KCTD17 BTB/POZ domain-containing protein KCTD17 1 AS(1)PRPLAR 49.933 0.009020499999999999 5076700.0 733.85 745.71 767.53 781.12 1140.4 802.59 850.55 842.84 807.03 1074.2 740.66 True False 808.3499117681829 808.5535987694726 819.6192013328316 829.3680083477677 1060.3022381664225 796.0539731378661 882.9181456888191 826.0288950048113 773.1133356224232 1006.3748286758815 649.5635154305788 1.24445091598525 1.2447644911729738 1.2617999346677087 1.2768081775621298 1.6323303464228216 1.2255213758583448 1.3592483640395898 1.2716676281568218 1.1902043714846675 1.5493093512322373 1.0 9.343326791531846 -9.490651182983935 0.6969199114055599 1.0224530400203637 1.3247783253124512 0.0 0.19119899302500004 0.33880843123721555 0.35869762664721794 0.04218513085320223 0.02609887705504161 3.23108822803107e-10 9.490651182983935 0.30232528529208746 AS(ph)PS(ph)CSSPTR ddPTM_A549_MK2206_60min_R1 1 ASPSCSSPTR 10 0 Q8N5I9;J3KN91;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 2 AS(0.994)PS(0.463)CS(0.297)S(0.241)PT(0.005)R 57.348 0.015399000000000001 1655000.0 213.24 341.66 232.64 232.31 362.95 127.02 179.45 204.44 201.88 343.63 279.03 True False 249.22969878254165 359.04903465214994 265.63185018146277 289.2259604287922 309.56053579695777 140.46117209094794 212.05374216157608 233.4199960712418 156.15450233611494 266.00374433860037 209.73915016376813 1.188284107129921 1.7118837106558216 1.266486728748794 1.3789793665272283 1.4759311056388247 0.6696945800594372 1.011035574407547 1.1129061784077185 0.7445176649861825 1.2682598557822888 1.0 7.712452371549309 -7.250291306183964 24.952568223216623 0.8938785146339431 1.412335849782917 0.5184915205262773 0.20271931075807617 314.7008690114842 704390.0919413946 0.02502651203266095 0.04309240875762022 5.619642571292028e-08 7.250291306183964 0.518457335148974 AS(ph)PS(ph)CSSPTR ddPTM_A549_PD325901_60min_R1 1 ASPSCSSPTR 10 0 Q8N5I9;J3KN91;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 2 AS(0.996)PS(0.429)CS(0.302)S(0.255)PT(0.018)R 50.284 0.03165 2322400.0 356.59 390.58 176.61 319.03 296.53 269.44 283.29 295.62 302.41 292.98 474.62 True False 392.7907542923162 423.49554734062934 188.5958166422047 338.7357585303005 275.70275577296513 267.24576997254735 294.0707559722361 289.72362719059646 289.70075935910296 274.48119279972036 416.2447488640688 0.9436533562627312 1.0174195554330665 0.45308875885373295 0.8137898663099289 0.6623573186817551 0.6420399793675731 0.7064852031761474 0.696041518796938 0.6959865803705532 0.6594225958376149 1.0 8.701288261753092 -10.705021196954316 0.9111501227289714 1.0037833437809782 0.73098043497963 0.0 0.17459462668028625 0.572673876346594 0.8268627548614476 0.10449044062415673 0.025830050720221993 1.9723264688674503e-11 10.705021196954316 -0.2728029088013483 AS(ph)PS(ph)PPPKR ddPTM_A549_PD325901_60min_R1 2 ASPSPPPKR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 AS(1)PS(1)PPPKR;AS(1)PS(1)PPPKR 58.676 0.0027018 49164000.0 7769.3 7924.6 9014.5 8374.8 9245.6 8955.0 8907.0 8851.2 7823.6 9198.2 9781.3 True False 8558.033616543633 8592.433853386114 9626.278178592122 8892.092375449203 8596.220951588459 8882.073449020787 9245.960759097421 8674.655872367923 7494.801299301869 8617.424082225363 8578.262108769375 0.9976418892347597 1.0016520531125124 1.122171141023003 1.0365843643736423 1.0020935292710076 1.03541642076206 1.0778361213334193 1.011236980448523 0.873696933512919 1.0045652572699957 1.0 13.066469682851062 -8.562422112200542 10.10498166977728 0.9404162645591507 1.0395455241922236 0.32851969937673553 0.04770245518050086 0.3129356729396799 77.68473464262918 0.009325344151506716 0.01058132603078087 2.73891079548182e-09 8.562422112200542 0.09912925963307284 AS(ph)PSKPASAPASR ddPTM_A549_MK2206_60min_R1 4 ASPSKPASAPASR 13 1 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(0.961)PS(0.039)KPASAPASR;AS(0.98)PS(0.02)KPASAPASR;AS(0.865)PS(0.13)KPAS(0.005)APASR;AS(0.983)PS(0.017)KPASAPASR 87.49799999999999 5.4122e-05 1110834000.0 9580.3 9494.8 8485.3 7802.200000000001 10036.0 8769.57 8010.200000000001 8104.21 12574.1 12471.4 14087.900000000001 True False 11197.220424152985 9978.044764430224 9688.64313249986 9713.73935025407 8559.717694608808 9697.560076630563 9465.549654291764 9253.006585602227 9726.086426711627 9654.102078236527 10589.485623739913 1.0573903985525632 0.9422596261012964 0.9149304769609857 0.9173003954486174 0.8083223301629785 0.9157725333599022 0.8938630251380232 0.8737918832297655 0.9184663705390294 0.9116686514587254 1.0 13.370344892760485 -10.360462649824662 0.8718196189572992 0.9968718362038326 0.9122882486021485 0.0 0.06151602429359938 0.6287124517044972 0.9082356064989685 0.030757448348547333 0.010824810917417618 4.3605106363265954e-11 10.360462649824662 -0.08458358760168405 AS(ph)PSKPASAPASR ddPTM_A549_PD325901_60min_R1 8 ASPSKPASAPASR 13 1 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(0.862)PS(0.137)KPAS(0.001)APASR;AS(0.88)PS(0.12)KPASAPASR;AS(0.968)PS(0.032)KPASAPASR;AS(0.861)PS(0.139)KPASAPASR;AS(0.955)PS(0.044)KPASAPASR;AS(0.93)PS(0.069)KPASAPASR;AS(0.904)PS(0.094)KPAS(0.002)APASR;AS(0.988)PS(0.012)KPASAPASR 103.01 3.5455e-05 1699997500.0 53345.24999999999 50752.9 48881.0 47049.7 57162.6 46929.310000000005 47072.99 48965.73 52238.700000000004 54957.700000000004 54804.4 True False 58760.820509302524 55030.02500031803 52198.35860533156 49955.85311137848 53147.69617626442 46547.13325872313 48864.378393778534 47989.07010227792 50043.2891039727 51487.66144286025 48063.80623371537 1.2225586176752583 1.1449368935270896 1.0860221587843353 1.0393653151076474 1.1057737690982712 0.9684445928477396 1.0166564453129305 0.9984450642324488 1.0411844800770018 1.0712356235895264 1.0 15.552663281389492 -4.498797688478141 0.5566956082463043 1.0154804270413766 1.619854518590424 0.7683031519172002 0.03399289169313297 2.157488894468186 0.24454946433357733 0.0052486078811687315 1.0247212072480016 3.171044316709534e-05 4.498797688478141 0.6043740915490474 AS(ph)PSPQPSSQPLQIHR ddPTM_A549_MK2206_60min_R1 1 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.827)PS(0.173)PQPSSQPLQIHR 147.09 5.5329e-15 154380000.0 5098.0 6189.2 5850.9 5387.4 7746.1 5468.3 5223.0 5669.9 8093.9 7875.4 9496.4 True False 5958.417765866613 6504.203843789396 6680.6455993239415 6707.313241849572 6606.658951196619 6046.951876436233 6171.95149239293 6473.625688340507 6260.64457330236 6096.341670297154 7138.181792693285 0.8347248555599563 0.9111849533514493 0.9359029782853552 0.9396388935786484 0.9255380632024897 0.8471277493417096 0.8646391576508463 0.9069012076670525 0.8770643218572577 0.8540468493724034 1.0 12.801340928564759 -10.764727437842113 0.9157099662636797 1.0027583585286177 0.8949584183686693 0.0 0.05415142274464092 0.3719538740794673 0.5306633323625692 0.027491504912531196 0.006304955726657797 1.718986880667079e-11 10.764727437842113 -0.10779994015994843 AS(ph)PSVTCK ddPTM_A549_MK2206_60min_R1 2 ASPSVTCK 8 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 AS(0.98)PS(0.018)VT(0.002)CK;AS(0.986)PS(0.011)VT(0.003)CK 114.97 0.0013154000000000002 31828000.0 11613.8 13723.2 11140.1 10110.6 14910.300000000001 10851.8 10058.3 11378.6 16293.599999999999 17713.1 17158.3 True False 13573.925509851248 14421.652263473572 12719.933692428272 12587.697453882074 12717.014621554974 12000.130273158147 11885.762913255949 12991.55139550104 12603.125615532614 13711.698407717771 12897.420565010862 1.052452732035091 1.1181811270540225 0.9862385760247216 0.9759856546843926 0.9860122462048492 0.9304287018222114 0.9215612419044923 1.0072984229688178 0.9771818753994396 1.0631349376103891 1.0 13.654794940533712 -5.775827080018248 23.307010573478397 0.9805522181330987 1.0853168839653158 0.5132675725095753 0.03832902450324765 40.490861461231425 65593.28269120962 0.0041680710879803025 0.013063362732184818 1.6756099090454407e-06 5.775827080018248 0.10476466583221711 AS(ph)PSVTCK ddPTM_A549_PD325901_60min_R1 1 ASPSVTCK 8 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 AS(0.986)PS(0.012)VT(0.003)CK 72.006 0.0058588 27424000.0 8568.0 9234.1 9086.6 7911.2 8285.5 8004.8 8176.4 8170.3 7204.3 7558.1 9124.0 True False 9437.817052571776 10012.290014076772 9703.271318164634 8399.856856361197 7703.555063423265 7939.611562782979 8487.557376297758 8007.336957023643 6901.528324628109 7080.880276126589 8001.805841801374 1.17946089159883 1.251253805956231 1.2126351863569116 1.0497451478365556 0.9627270663304464 0.9922274696177339 1.0607052388048235 1.0006912333705191 0.8624963490834251 0.8849102835182682 1.0 12.966109907788413 -6.426793956617792 2.2275600016696817 0.9538217163087387 1.2237850991420633 0.792991139210795 0.05510173856047943 0.11673971035359322 1.1263541694027808 0.00980151187988005 0.026902990820279003 3.742881205741477e-07 6.426793956617792 0.26996338283332466 AS(ph)PT(ph)RTPPRESLR ddPTM_A549_PD325901_60min_R1 1 ASPTRTPPRESLR 13 2 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 2 AS(0.984)PT(0.587)RT(0.428)PPRES(0.001)LR 42.277 0.042274 2375700.0 434.36 376.25 142.99 337.52 307.34 271.33 219.53 147.7 221.98 332.71 305.69 True False 478.45590744106823 407.95790794949005 152.69416126872116 358.36784383646346 285.7534986654403 269.1203784391748 227.88433428142542 144.7540076315915 212.6509525562438 311.70263381935604 268.0920679285686 1.784670136412054 1.5217082366576686 0.569558668589201 1.3367342294213205 1.065878229346112 1.0038356618252509 0.8500226658781405 0.5399414042722079 0.7932012095669435 1.1626701089209666 1.0 8.066584724539409 -5.613367858753498 5.568151906231353 0.903701515125205 1.7228188478125548 0.6112234501380884 0.22703514176523543 0.08170972049341171 3.8590040241399977 0.02936251080939464 0.11965760478005598 2.4357468032830004e-06 5.613367858753498 0.8191173326873498 AS(ph)PTGTPSR ddPTM_A549_MK2206_60min_R1 1 ASPTGTPSR 9 0 Q9UF83 Q9UF83;REV__Q9UF83 Uncharacterized protein DKFZp434B061 1 AS(0.694)PT(0.086)GT(0.217)PS(0.002)R 55.401 0.017749 15637000.0 1055.9 1171.6 909.26 1322.7 1569.0 1138.4 1115.7 1214.9 1749.7 1443.1 1664.4 True False 1234.11010572353 1231.2294356917953 1038.2067404401523 1646.7615593782584 1338.2021784417325 1258.864732391239 1318.4082481452788 1387.1157954752082 1353.3957436967526 1117.1027077235228 1251.0835448968776 0.986433009016399 0.9841304689154722 0.8298460519882611 1.3162682588987253 1.0696345451110827 1.0062195586586526 1.0538131154574097 1.108731548051448 1.081778870177937 0.892908161313561 1.0 10.288962417718142 AS(ph)PTGTPSR ddPTM_A549_PD325901_60min_R1 2 ASPTGTPSR 9 0 Q9UF83 Q9UF83;REV__Q9UF83 Uncharacterized protein DKFZp434B061 1 AS(0.863)PT(0.118)GT(0.019)PSR;AS(0.955)PT(0.045)GTPSR 105.52 0.00056479 42737000.0 4118.5 4309.3 3946.0 4128.8 4229.5 4352.2 3713.85 4221.65 4141.9 4057.67 3957.2000000000003 True False 4536.607088120547 4672.459834489663 4213.799289225636 4383.82659881486 3932.4345109828855 4316.757126167312 3855.182594046698 4137.445878929642 3967.8303468452386 3801.4680237137054 3470.489486757603 1.3071951681256906 1.3463402935863762 1.2141801049403236 1.2631724186292135 1.1331065908679259 1.2438467664687718 1.1108469306007045 1.192179343783335 1.1433056812260478 1.0953694106318494 1.0 11.76092344323355 -2.000000009711502 0.0363368896119165 0.33560574056082076 2.55979947892731 0.7112035720126513 0.05215520146161742 186.9964065857565 0.5046524861414444 8.846433940024689 26.534559353831465 0.009999999776384409 2.000000009711502 2.2241937383664894 AS(ph)PTLDFTER ddPTM_A549_MK2206_60min_R1 2 ASPTLDFTER 10 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 AS(0.978)PT(0.022)LDFTER;AS(0.915)PT(0.085)LDFTER 141.71 5.0277e-08 17447000.0 3819.6 3952.2 4096.6 3857.1 5624.1 4787.4 4240.0 4717.5 5809.2 5174.4 6516.6 True False 4464.255099745806 4153.350098788931 4677.559480112538 4802.0896731518 4796.80234020022 5293.999490381076 5010.353116551033 5386.220071737836 4493.425475386163 4005.4994462231284 4898.348370989538 0.9113796654777252 0.8479082711607736 0.9549258496629962 0.9803487439954597 0.9792693326202104 1.0807723521125572 1.0228658186552926 1.0995992248402988 0.9173348106472928 0.8177244946369462 1.0 12.25807966681762 -5.920283442620852 4.561832684614741 0.984960391042991 0.8804928934153518 0.2394348304345676 0.07305126483626166 0.18837515649574593 7.229683318079913 0.008504163417380452 0.02807849183338807 1.2014800318266404e-06 5.920283442620852 -0.1044674976276393 AS(ph)PTLDFTER ddPTM_A549_PD325901_60min_R1 2 ASPTLDFTER 10 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 AS(1)PTLDFTER;AS(0.998)PT(0.002)LDFTER 218.55 7.4782e-27 24542000.0 5453.9 5937.200000000001 4933.799999999999 4843.6 6726.299999999999 5020.8 5568.5 5011.2 5328.5 6140.0 6929.2 True False 6007.575913051021 6437.548680605216 5268.637337349579 5142.778171386272 6253.8678924752785 4979.9122694409325 5780.412314700124 4911.247684789648 5104.561675357894 5752.319352141046 6076.952327817851 0.9885836829015011 1.059338354710584 0.8669867810599516 0.8462758787566419 1.0291125477235652 0.8194752897179876 0.9512025112061047 0.8081761086569538 0.8399871185415192 0.9465796408849934 1.0 12.569132259005066 -5.759443664423541 24.99645462452591 0.908961629318741 1.0239610354816662 0.2979207435502217 0.07201083669606176 54.60488273847038 683874.3460930933 0.010950071360927505 0.038565360919440586 1.7400283954608036e-06 5.759443664423541 0.11499940616292514 AS(ph)PTRGPR ddPTM_A549_PD325901_60min_R1 2 ASPTRGPR 8 1 Q9UPR0 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 AS(0.894)PT(0.106)RGPR;AS(0.89)PT(0.11)RGPR 59.426 0.0034986999999999996 12382600.0 1384.5 1629.98 1566.63 1495.1 2005.62 1666.9 1373.63 1974.83 1755.05 2215.37 1854.47 True False 1525.0534207849687 1767.3441350153066 1672.9509327114952 1587.4489313815384 1864.7521702133818 1653.325319058934 1425.904241329178 1935.4404664258352 1681.2913518507773 2075.4911601225904 1626.3819464538997 0.9376969684827947 1.0866722536294475 1.0286334869611242 0.9760615794111283 1.1465647256348457 1.0165664484064032 0.8767339335253717 1.1900282529855886 1.0337616914136314 1.2761400633153308 1.0 10.667450390504598 -10.394029398316885 1.2279406217643836 1.0031960344690536 1.034286745888992 0.0 0.11749812814992121 1.5864262621694034 4.726147197997363 0.031156190493898863 0.013789362261723581 4.036180702774926e-11 10.394029398316885 0.031090711419938355 AS(ph)PTSDIESVER ddPTM_A549_MK2206_60min_R1 2 ASPTSDIESVER 12 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 AS(0.877)PT(0.105)S(0.018)DIESVER;AS(0.944)PT(0.049)S(0.008)DIESVER 122.46 1.056e-05 9879100.0 1369.46 1318.5 1186.37 945.39 1456.42 1399.88 1336.4499999999998 1270.63 1855.8600000000001 1221.5900000000001 1803.18 True False 1600.591367917555 1385.6060182311644 1354.6151053119931 1177.01059244017 1242.1825473079077 1548.014372434862 1579.2656657109962 1450.7456936411752 1435.5106731994376 945.631970568899 1355.4006407637296 1.1808990786780709 1.0222852022929656 0.9994204404010804 0.8683857429615484 0.9164689095970718 1.1421083374747412 1.1651652051906403 1.070344553492111 1.059104319436184 0.6976770868546014 1.0 10.404503643259073 -7.251644866464051 24.887041674803537 1.0506717050864771 0.9918038704557669 0.0 0.13709714214746102 1360.8634338941938 3457835.0462818556 0.013782653396730429 0.023684511215475993 5.60215516582684e-08 7.251644866464051 -0.058867834630710214 AS(ph)PTSDIESVER ddPTM_A549_PD325901_60min_R1 2 ASPTSDIESVER 12 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 AS(0.882)PT(0.117)S(0.001)DIESVER;AS(0.853)PT(0.121)S(0.025)DIESVER 117.2 2.2381999999999997e-05 12726600.0 1316.96 1192.69 1191.83 1242.23 1535.23 1236.71 1273.3899999999999 1037.08 1173.6 1215.93 1368.12 True False 1450.6568097052898 1293.2021720459193 1272.7147508560035 1318.9597257909766 1427.4007410559784 1226.6386437898939 1321.8495532757454 1016.3946258264793 1124.2776733039361 1139.155972288088 1199.8499132272354 1.2090318911666704 1.077803280051581 1.0607282934519564 1.099270593138913 1.189649409747174 1.022326734591833 1.101679083945064 0.8471014704603207 0.9370152557497523 0.949415389149882 1.0 10.228638238008532 -8.167194892060474 10.421820507752297 0.9602105485151643 1.1052503052170415 0.6385714399048272 0.062216847779110705 0.2956631154953926 31.296457564566182 0.010073578627123441 0.013009035751416237 6.8046392820052685e-09 8.167194892060474 0.1450397567018772 AS(ph)PTSTEEEQVMLR ddPTM_A549_PD325901_60min_R1 2 ASPTSTEEEQVMLR 14 0 Q96PE3-2;Q96PE3-4;Q96PE3-3;Q96PE3 Q96PE3-2 INPP4A Type I inositol 3,4-bisphosphate 4-phosphatase 1 AS(0.653)PT(0.108)S(0.195)T(0.043)EEEQVMLR;AS(0.497)PT(0.436)S(0.054)T(0.014)EEEQVMLR 93.348 5.7906000000000004e-05 4036600.0 1482.79 1956.58 1607.25 1258.23 1884.85 1696.9699999999998 1872.52 1865.3899999999999 1523.65 1679.63 1772.6999999999998 True False 1633.3217492276954 2121.467863218108 1716.3276501793982 1335.9480094523392 1752.4646383794993 1683.1504389486104 1943.7797732822596 1828.1833330798552 1459.6162891356018 1573.577875152551 1554.6691380711618 1.0505912217786195 1.364578360287102 1.1039825826277108 0.859313391343071 1.1272267490649086 1.08264221481675 1.2502851736632898 1.1759308063116474 0.9388597569682964 1.0121625473988947 1.0 10.602391865884256 -8.764988248622135 24.999591723138277 0.9711282118302881 1.1277226692085593 0.21914224197697485 0.11969422135838823 92.47417282977173 651422.0562070371 0.02093340305664271 0.02271964214672208 1.717954871892174e-09 8.764988248622135 0.15659445737827127 AS(ph)PVSFQELNR ddPTM_A549_MK2206_60min_R1 2 ASPVSFQELNR 11 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 AS(0.994)PVS(0.006)FQELNR;AS(0.999)PVS(0.001)FQELNR 116.19 1.9656e-05 17538600.0 6347.0 6806.200000000001 6413.0 6611.799999999999 9018.2 6167.0 5377.4 7329.3 11010.4 9571.6 9983.0 True False 7418.218430748416 7152.606508369321 7322.4598315582925 8231.69129681498 7691.634726337302 6819.587846676712 6354.403973806957 8368.250720039876 8516.56197999584 7409.3689122351 7503.9455832164895 0.988575723062303 0.9531794212856525 0.9758146231678289 1.0969817418753922 1.0250120607938047 0.908800279939339 0.8468083761187414 1.1151800912251433 1.1349445282551347 0.9873964076721289 1.0 12.87343365048068 -8.30765663945373 24.999978140337902 1.069363544479975 0.9748192085907623 0.25550289477979915 0.07184374637580576 458.4192682119142 247968.34295405357 0.013162796037190307 0.015913063016561625 4.924287042630585e-09 8.30765663945373 -0.09454433588921263 AS(ph)PVSFQELNR ddPTM_A549_PD325901_60min_R1 2 ASPVSFQELNR 11 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 AS(1)PVSFQELNR;AS(1)PVSFQELNR 186.94 9.420999999999998e-19 26260000.0 6177.3 6540.9 6490.2 6563.9 7430.5 6385.200000000001 6304.8 6635.8 6501.5 6540.3 7114.4 True False 6804.414948512093 7092.124598290544 6930.66400074309 6969.3371953015 6908.607313833394 6333.201048206312 6544.732614118937 6503.443763315609 6228.264564575269 6127.344341825417 6239.37390189738 1.090560536281194 1.1366724786494753 1.1107947864184722 1.1169930356605395 1.107259706255543 1.0150379104993852 1.0489406015768181 1.0423231345917459 0.9982194788296415 0.9820447432974172 1.0 12.607185551899278 -7.498833056314536 0.7894791562635943 0.9995806854767211 1.1222566712547835 0.8350407895896862 0.021496177796915754 0.1548966871914329 0.19263280214374784 0.0038525221855170867 0.008416007969528622 3.170786085452485e-08 7.498833056314536 0.12267598577806238 AS(ph)PVSR ddPTM_A549_MK2206_60min_R1 2 ASPVSR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AS(0.999)PVS(0.001)R;AS(1)PVSR 111.29 0.023038 71358000.0 7808.4 5664.799999999999 4165.5 3089.4 4988.6 4093.8 3631.5 4850.3 4986.4 6750.5 7394.3 True False 9126.267022948778 5953.114123682896 4756.230536154075 3846.3031386884345 4254.7835483584595 4527.003198755494 4291.296543102612 5537.844878420777 3856.9883616445577 5225.557361574134 5558.091237701861 1.641978627670436 1.0710716807420324 0.8557309214162276 0.6920187118552572 0.7655116417480242 0.814488824517264 0.7720809824052045 0.9963573179325037 0.6939411745315881 0.9401712095202629 1.0 12.440373801658218 -5.283924795311701 2.134391564052489 0.8367424284440078 1.8374015954559222 0.8405413247310033 0.10212176420537666 0.21288595473452887 1.1096949227743858 0.01735115228733154 0.3985412563338262 5.2008604953803745e-06 5.283924795311701 1.0006591670119143 AS(ph)PVSR ddPTM_A549_PD325901_60min_R1 1 ASPVSR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AS(1)PVSR 99.79899999999999 0.033571 58642000.0 4017.2 4259.8 3604.3 3013.4 3392.8 2836.9 2490.9 2439.6 3017.7 4374.5 4857.4 True False 4425.023186693663 4618.788295769398 3848.9094724166125 3199.530874072052 3154.501432524588 2813.797226971197 2585.6925625727795 2390.9402641708234 2890.87656333443 4098.293323443159 4259.970593595572 1.0387450076172429 1.0842300889854197 0.9035061129771771 0.7510687700244265 0.7404984056150662 0.6605203404928316 0.6069742750008892 0.5612574574494379 0.6786142063235286 0.9620473271821459 1.0 12.056627756282152 -5.962737279263831 3.1802595144356043 0.7815171607491816 1.0615583541212932 0.4534322952454427 0.13110794960669644 0.23294420546060943 4.81376502337688 0.02360934643845726 0.08260966993465206 1.0895890265611525e-06 5.962737279263831 0.28004119337211153 AS(ph)QSRPNS(ph)SALETLGGEK ddPTM_A549_MK2206_60min_R1 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 2 AS(0.555)QS(0.555)RPNS(0.708)S(0.174)ALET(0.008)LGGEK 41.763000000000005 0.024452 15881000.0 2177.3 2531.6 2254.6 1607.1 3048.1 2426.2 2251.0 2473.1 3216.9 3630.6 3251.9 True False 2544.7750101258107 2660.447626662128 2574.336182166121 2000.8395721454592 2599.7285277936558 2682.9388736187843 2659.97756258405 2823.669498551106 2488.2772863337036 2810.4449384387904 2444.363482125785 1.041078803841686 1.0884009870530473 1.0531724111371943 0.8185523907456647 1.0635605329583613 1.0976022564719048 1.0882086817426808 1.155175782652198 1.0179653331139311 1.1497655561416895 1.0 11.255243117637526 AS(ph)QSRPNSSALETLGGEK ddPTM_A549_MK2206_60min_R1 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 AS(0.564)QS(0.393)RPNS(0.021)S(0.021)ALET(0.001)LGGEK 55.051 0.0029795000000000004 15388000.0 4558.7 6743.6 5218.1 5357.3 6639.3 5170.7 5259.3 5207.0 7708.6 7613.5 8222.2 True False 5328.097110485709 7086.820435755542 5958.105043981654 6669.838740498336 5662.667765027527 5717.860041967128 6214.846732518122 5945.108195768713 5962.614408104694 5893.605062194607 6180.400818824265 0.8620957227009275 1.1466603289175847 0.964032142678264 1.0791919385201265 0.9162298580668382 0.9251600680253084 1.005573410965344 0.9619292291951522 0.9647617659268575 0.9535959292872825 1.0 12.593484689228415 -6.762744058616506 24.99999454892777 0.9747125457688822 1.0190451951744788 0.0885670804606099 0.07118394944500195 66.65963903029967 1277367.6900143484 0.009090280099016966 0.017869713937528967 1.7268552742930025e-07 6.762744058616506 0.04433264940559656 AS(ph)RALLR ddPTM_A549_PD325901_60min_R1 1 ASRALLR 7 1 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 AS(1)RALLR 107.57 0.0025669 15578000.0 910.14 574.77 488.94 901.32 683.9 828.91 841.49 858.54 698.03 751.23 681.63 True False 1002.5367427903439 623.2078850554901 522.1224086350693 956.9924893537614 635.865223326917 822.1596317842348 873.5133624309963 841.4157461883993 668.6942265647122 703.7972095942862 597.7938312085781 1.677061037521054 1.0425130747761844 0.8734155178207149 1.6008738119946475 1.0636864921161344 1.375323044271048 1.4612284651131102 1.4075350100004935 1.1186034242153227 1.177324309572412 1.0 9.223504199318816 -8.951335777833144 4.183886254504255 1.0495770611516748 1.297187398627807 0.1352570846583393 0.23375271718770432 0.2549233224288913 8.762871226546546 0.04023756148357009 0.04170695476516027 1.1185727166923549e-09 8.951335777833144 0.24761033747613226 AS(ph)S(ph)HSSQTQGGGSVTK ddPTM_A549_MK2206_60min_R1 1 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.506)S(0.466)HS(0.466)S(0.466)QT(0.097)QGGGSVTK 51.147 0.0082964 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)SDGEGTMSRPASVDGSPVSPSTNR ddPTM_A549_MK2206_60min_R1 3 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(0.523)S(0.475)DGEGT(0.001)MS(0.001)RPASVDGSPVSPSTNR;AS(0.527)S(0.472)DGEGTMSRPASVDGSPVSPSTNR;AS(0.533)S(0.464)DGEGT(0.001)MS(0.001)RPASVDGSPVSPSTNR 70.632 3.4107e-05 19666500.0 3109.06 3182.46 2967.23 2898.7000000000003 4441.5 2900.2700000000004 2959.71 2815.81 4609.799999999999 4820.4 4193.4 True False 3633.7933187809444 3344.433620614299 3388.0278319031236 3608.881630127586 3788.161233619471 3207.174646356584 3497.4509958932217 3214.9596905564613 3565.6876603379383 3731.4682920868017 3152.063048047685 1.1528301507267225 1.0610300522655358 1.074860426412343 1.1449268542908253 1.2018037634005356 1.0174842944030051 1.1095752028372219 1.0199541194290938 1.1312234577752 1.1838177838473083 1.0 11.622080676752073 -7.285928718846333 24.98522241037809 1.0610956772846487 1.1215095252897962 0.10620965166921092 0.06286101362712153 1006.8099121313434 1027193.7088577907 0.009121411604745444 0.014584315337585356 5.176917942093253e-08 7.285928718846333 0.060413848005147486 AS(ph)SDGEGTMSRPASVDGSPVSPSTNR ddPTM_A549_PD325901_60min_R1 1 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(0.524)S(0.476)DGEGTMSRPASVDGSPVSPSTNR 77.31 1.2768e-06 16109000.0 2176.0 2377.8 1761.7 2187.4 2513.6 2505.3 2615.9 2613.8 2796.0 3461.1 3511.3 True False 2396.905918113465 2578.1855508898248 1881.259555962697 2322.5107300541613 2337.0534074492457 2484.8976674295673 2715.4495059754063 2561.665708513568 2678.493843351912 3242.56555532498 3079.4323599646173 0.7783596578627255 0.8372275307646141 0.6109111472688145 0.7542009236016625 0.7589234424607068 0.8069336737950363 0.8818019649590897 0.8318629568934587 0.8698011614655786 1.0529750864091838 1.0 11.588448724238972 -9.107776012773037 0.3152317704891813 1.0220265819676986 0.7251890085964147 0.729030492396253 0.05969954118845286 0.566778234382503 0.16209039806417727 0.061861538966724514 0.041478886850303646 7.802324113640259e-10 9.107776012773037 -0.2968375733712839 AS(ph)SFADMMGILK ddPTM_A549_PD325901_60min_R1 1 ASSFADMMGILK 12 0 E9PPF9;E9PLD2;Q9H019-3;Q9H019 E9PPF9 MTFR1L Mitochondrial fission regulator 1-like 1 AS(0.5)S(0.5)FADMMGILK 52.343999999999994 0.007081399999999999 12190000.0 2570.5 2744.6 2693.4 2847.1 3127.7 3103.9 3222.3 2919.2 2804.6 3029.7 2952.1 True False 2831.455267697916 2975.897074174537 2876.1903207299356 3022.9589007667546 2908.021141979234 3078.622867494765 3344.92638981022 2860.9742659319018 2686.73241525922 2838.4042249481618 2589.010414903751 1.0936438306306226 1.1494341842132638 1.1109226537572119 1.1676117188887924 1.1232172436383738 1.1891118126727258 1.2919710058155833 1.1050454835803591 1.0377449236175058 1.0963278512163428 1.0 11.338185053492143 -8.68588717868649 3.352559971045679 1.0168479323469857 1.1603732244306857 0.43323790870883205 0.0556176168192738 0.11722220304540412 2.6213128671842156 0.009063484803595886 0.010126780022605513 2.0611652946369468e-09 8.68588717868649 0.14352529208370002 AS(ph)SHSS(ph)QTQGGGSVTK ddPTM_A549_MK2206_60min_R1 1 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.433)S(0.433)HS(0.239)S(0.666)QT(0.229)QGGGSVTK 53.625 0.0053758 58718000.0 1021.6 1029.3 770.44 656.52 1248.4 910.09 1000.3 1028.7 1767.5 1455.5 2102.4 True False 1194.021104278018 1081.686973504237 879.6999770194562 817.3674294723024 1064.7620137454796 1006.3951197311513 1182.0415619070745 1174.521375261624 1367.1640721175115 1126.7015391113478 1580.3160567118457 0.755558420865767 0.6844750889609365 0.5566607852164983 0.5172176957899131 0.673765231469535 0.6368315473710694 0.7479779483899831 0.7432192884918499 0.8651206613455297 0.7129596224287368 1.0 10.625997404995713 -8.759289241156175 0.6783277847132108 0.974294917916145 0.6240062350677558 0.37529183266320454 0.1011486066582691 0.18221016806633672 0.17850403195740072 0.01945918967130444 0.019609433036710717 1.7406472120894898e-09 8.759289241156175 -0.3502886828483892 AS(ph)SHSSQTQGGGSVTK ddPTM_A549_MK2206_60min_R1 1 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.454)S(0.454)HS(0.087)S(0.004)QTQGGGSVTK 84.249 3.7905e-05 4509000.0 414.02 406.32 401.14 344.53 595.41 526.11 449.39 610.02 781.55 852.16 654.83 True False 483.89645418283584 426.9999524669597 458.02768389697377 428.9398654665391 507.8259777348577 581.7826109964465 531.0383460016197 696.4922031078995 604.5301728788917 659.6564641491761 492.2176386114045 0.9830945017491783 0.8675023383387267 0.9305389485616891 0.8714435075439834 1.0317102393312965 1.1819621349566298 1.0788689887256628 1.4150086231626606 1.2281765736480557 1.3401723392321605 1.0 8.94315254745143 -6.986225594785394 3.826860164449775 1.1377220924451314 0.9120730234439555 0.5311507918674814 0.12058894617791678 0.17282052283471555 5.62766833917509 0.018650550014783888 0.035388756108960466 1.0322250759309294e-07 6.986225594785394 -0.22564906900117598 AS(ph)SHSSQTQGGGSVTK ddPTM_A549_PD325901_60min_R1 2 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.2)S(0.2)HS(0.2)S(0.2)QT(0.2)QGGGS(0.001)VTK;AS(0.234)S(0.234)HS(0.234)S(0.234)QT(0.064)QGGGSVTK 48.898999999999994 0.007293600000000001 6299400.0 1100.49 1261.12 1135.74 1434.9099999999999 1717.4699999999998 1469.44 1528.6 1258.17 1173.21 2033.2199999999998 1447.87 True False 1212.2109346620812 1367.399008301024 1212.818146159434 1523.5411317829469 1596.840832149847 1457.4733678312784 1586.7717094820148 1233.0748123347294 1123.904063647675 1904.8421422085032 1269.7911688041374 0.954653776497529 1.0768692064450343 0.9551319744187862 1.199835980287834 1.2575617718728649 1.147805563338337 1.249632024907216 0.9710847284408295 0.8851093717293247 1.500122373667509 1.0 10.31037553401883 -8.426179674512277 8.03451798985623 0.9448388655602541 1.1213896022335281 0.0 0.19405569725322025 0.2395946321830841 17.979330011862903 0.017399781527019244 0.021029773733032574 3.748179020557139e-09 8.426179674512277 0.17655073667327403 AS(ph)SPAQCVTPVQTVV ddPTM_A549_MK2206_60min_R1 2 ASSPAQCVTPVQTVV 15 0 Q13614;Q13614-2 Q13614 MTMR2 Myotubularin-related protein 2 1 AS(0.5)S(0.5)PAQCVTPVQTVV;AS(0.5)S(0.5)PAQCVTPVQTVV 120.3 5.9775e-07 25238000.0 1338.61 1622.83 1309.94 1388.76 2171.06 1454.9 1288.4099999999999 1696.1999999999998 2220.7 1933.08 2893.5 True False 1564.5346421276408 1705.4251153326352 1495.709189420158 1729.0062623438055 1851.6999499857914 1608.856552315542 1522.497419550828 1936.641544394641 1717.7149957291988 1496.3958854176335 2174.9640934625772 0.7193381476182795 0.7841164460869657 0.6876937389062664 0.7949585317480805 0.8513703539067883 0.7397163737789423 0.7000103698847681 0.8904246052685297 0.7897670590940972 0.6880094664162237 1.0 11.086775868331005 -12.301655116704385 0.2489537589711112 1.3166655005204486 0.7397683609248703 0.0 0.1094627158551593 4.643011440261453 0.18897352034998444 0.853417189793966 0.032841953866053236 4.992808205211475e-13 12.301655116704385 -0.5768971395955783 AS(ph)SPEKAEEDR ddPTM_A549_MK2206_60min_R1 1 ASSPEKAEEDR 11 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.5)S(0.5)PEKAEEDR 43.083999999999996 0.058989 2460100.0 1314.3 1375.9 971.62 1006.8 271.29 326.16 246.7 124.42 451.28 1636.3 1588.7 True False 1536.1217084500765 1445.927433055942 1109.4103261404446 1253.466045196969 231.38360037568995 360.67403471251447 291.5221966634763 142.0569160202695 349.0658005460767 1266.6586935402945 1194.1819441105918 1.2863380794072852 1.2108099943956583 0.9290128121696868 1.0496441110826968 0.193759084632636 0.30202603254158134 0.24411874430122749 0.11895751457377067 0.29230537462702594 1.0606915468678286 1.0 10.221806945275471 -6.646927089500175 7.198664883212153 0.5293536599507745 1.121948409568862 0.5072893056204302 0.30857637123731635 0.19003821420415248 11.30046310902172 0.05254365262003253 0.10975921506360221 2.2546176915292266e-07 6.646927089500175 0.5925947496180876 AS(ph)SPEKAEEDR ddPTM_A549_PD325901_60min_R1 1 ASSPEKAEEDR 11 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.5)S(0.5)PEKAEEDR 43.99100000000001 0.050730000000000004 4920900.0 858.23 1121.0 767.55 752.26 869.22 776.39 902.34 886.86 833.88 879.17 1020.2 True False 945.3568778044671 1215.4706041498414 819.640558653101 798.725391693583 808.16898584621 770.0673372512846 936.6790424793946 869.1708815717893 798.8349234958133 823.6590561599089 894.72186758064 1.0565930174041078 1.3584898818182654 0.9160841914699576 0.8927080254038778 0.9032628072805775 0.8606778990811683 1.046894097952706 0.9714425376928123 0.892830445349337 0.9205755285573968 1.0 9.805295466985855 -5.779200935181999 24.999525690244162 0.9419856797183431 1.2075414624888468 0.6196099280971414 0.08251407445341921 95.1409841462608 133912.12491642562 0.01084475058761812 0.03382050401522692 1.6626432166599721e-06 5.779200935181999 0.2655557827705036 AS(ph)SPEKAEEDRR ddPTM_A549_MK2206_60min_R1 1 ASSPEKAEEDRR 12 2 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.534)S(0.466)PEKAEEDRR 48.70399999999999 0.010752 22573000.0 4196.3 4135.5 4309.4 3251.5 2670.5 1195.9 1081.3 926.15 1749.5 6123.7 5755.9 True False 4904.53285031504 4345.979285851331 4920.537719962158 4048.1176459653816 2277.672987589958 1322.449344225828 1277.7582134260915 1057.4345987154206 1353.2410433774185 4740.351916905643 4326.5511752414905 1.1335894692245931 1.004490438185735 1.137288690382245 0.9356453863600567 0.5264407828165416 0.30565900891072073 0.29532950418754084 0.24440589187215586 0.3127759244178791 1.0956421696875123 1.0 12.079001751888724 -6.643438050962292 3.952615404854514 0.5691287193547713 1.0772825100082273 0.4605094494991101 0.268796333322084 0.1981415068962487 5.735011272431286 0.0459646759823821 0.09914937519381928 2.272803811546271e-07 6.643438050962292 0.508153790653456 AS(ph)SPFRR ddPTM_A549_MK2206_60min_R1 1 ASSPFRR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.5)S(0.5)PFRR 48.283 0.024018 25786000.0 1423.5 1418.0 905.44 867.12 1609.1 1219.4 930.36 929.37 1709.7 1558.4 1543.8 True False 1663.7519987664048 1490.1701432323025 1033.8450069992432 1079.5644389264962 1372.403521561881 1348.4360986277902 1099.394369225099 1061.1110435762564 1322.4556798298781 1206.3563576441945 1160.4318532875498 1.433735203021986 1.2841513605564954 0.890914019699062 0.9303126554722253 1.1826661924815378 1.1620123101650621 0.9474010611743127 0.9144104762120123 1.1396237323917888 1.0395753565593178 1.0 10.180446087128338 -5.576940831533587 5.532884212606286 1.0458535332020271 1.400684969936153 0.6347265997778944 0.09958359906658291 0.08656287104852721 5.538439964409194 0.014597767130885328 0.06079925048658362 2.6488609959822184e-06 5.576940831533587 0.35483143673412587 AS(ph)SPIKQSHEPVPDTSVEK ddPTM_A549_MK2206_60min_R1 2 ASSPIKQSHEPVPDTSVEK 19 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 AS(0.479)S(0.479)PIKQS(0.042)HEPVPDTSVEK;AS(0.565)S(0.434)PIKQS(0.001)HEPVPDTSVEK 135.76 3.3748e-17 111230000.0 7488.4 8645.8 8203.0 8021.1 10829.0 7197.8 7469.2 8124.6 12283.9 12175.900000000001 12841.900000000001 True False 8752.258846197634 9085.83429080243 9366.308747586578 9986.26986008086 9236.068445089553 7959.466418487045 8826.256957109186 9276.286930543978 9501.616263357457 9425.355733470198 9652.901811590484 0.9066971794625088 0.94125419155231 0.9703101647983422 1.0345355267252478 0.9568178176224243 0.8245672207014384 0.9143630723054984 0.9609842834416595 0.9843274539422565 0.9764271840155812 1.0 13.236746988687928 -8.663958988974606 2.874922249985256 0.9930981644957173 0.9375048124921552 0.17622812161843526 0.04819809100699364 0.3284762668654525 5.417874694747019 0.009117124723902487 0.010224603689574615 2.1679088137657886e-09 8.663958988974606 -0.05559335200356208 AS(ph)SPNLHR ddPTM_A549_MK2206_60min_R1 1 ASSPNLHR 8 0 A0A087X030;P51956-2;P51956;A0A087WY58 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 AS(0.591)S(0.409)PNLHR 59.153 0.0040323 5803400.0 690.28 802.37 531.22 451.21 746.34 500.24 318.94 492.32 657.89 1071.5 987.56 True False 806.7823882743049 843.207205800636 606.554983895275 561.7564702555868 636.55437467062 553.1750647675624 376.88726957377014 562.1078676667663 508.87896543444936 829.447405810931 742.3215967305694 1.0868367454586292 1.1359055287013073 0.8171053982084644 0.7567561993747033 0.8575183282747217 0.745195973286954 0.5077142726733356 0.7572295756212346 0.6855235893388003 1.1173693577879082 1.0 9.535900532269876 -5.766054325585082 22.72241871106505 0.8048065793047241 1.1113713229915279 0.3801506443309488 0.15092073101623252 25.74311013234059 126762.88030218074 0.021086302898072888 0.0691299721897363 1.71374292322767e-06 5.766054325585082 0.30656474368680375 AS(ph)SPPDRIDIFGR ddPTM_A549_MK2206_60min_R1 1 ASSPPDRIDIFGR 13 1 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.51)S(0.49)PPDRIDIFGR 51.875 0.007041899999999999 8336100.0 457.91 615.53 614.25 569.98 792.82 378.08 639.15 666.45 923.56 949.84 1072.7 True False 535.1940131753595 646.8578478588001 701.3598864080277 709.6251255873749 676.1972282423035 418.0881746508077 755.2752817083939 760.9213284175263 714.3751346222627 735.2704843074707 806.3189849861095 0.6637497357011621 0.8022356659132162 0.8698293100715098 0.8800798924505041 0.8386224817141722 0.5185146107628982 0.9366953969481508 0.9436976464477451 0.8859708724761942 0.9118853679479434 1.0 9.655206880906272 -7.9467132096473065 24.99999932483621 0.9442620901121831 0.7735445361802009 0.4233179668130418 0.10014860450897152 74.7039262779226 35047.78618668326 0.016027827186326133 0.022145624639106895 1.1305422321806152e-08 7.9467132096473065 -0.17071755393198218 AS(ph)SPPDRIDIFGR ddPTM_A549_PD325901_60min_R1 3 ASSPPDRIDIFGR 13 1 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.55)S(0.45)PPDRIDIFGR;AS(0.5)S(0.5)PPDRIDIFGR;AS(0.559)S(0.441)PPDRIDIFGR 92.38 4.9881000000000006e-05 102352100.0 2903.0 2778.09 2947.81 3263.87 3659.8099999999995 3373.7999999999997 3035.7 3817.0 4139.299999999999 3650.2 3735.5 True False 3197.7104229243505 3012.209394007704 3147.866113221548 3465.4718371134086 3402.7575712590806 3346.324891379826 3151.225224698779 3740.866940621429 3965.3396158034966 3419.725749052973 3276.057181285511 0.9760850455209644 0.9194617881564954 0.9608703203362093 1.0578178723222322 1.0386746576638974 1.0214488655740563 0.9618956722428916 1.1418808444465334 1.2104000010914078 1.043854108709753 1.0 11.67774482309311 -6.860609967861087 0.6956049444046845 1.0971420165648196 0.9425399850007992 0.3107415905823021 0.06698923098696095 0.8342433539006436 0.7108151377491579 0.01665551813885471 0.06705914022538696 1.3784468717498401e-07 6.860609967861087 -0.15460203156402041 AS(ph)SPSLIER ddPTM_A549_MK2206_60min_R1 1 ASSPSLIER 9 0 A1L170;A1L170-2 A1L170 C1orf226 Uncharacterized protein C1orf226 1 AS(0.498)S(0.498)PS(0.004)LIER 48.998000000000005 0.031150999999999998 16222000.0 2643.1 2856.3 2102.7 3099.2 2805.5 2717.7 2232.5 2879.4 3483.2 3662.8 4629.2 True False 3089.190662409191 3001.6734697562947 2400.8944780629386 3858.5041391283744 2392.8146664233773 3005.2852101367434 2638.116352051927 3287.563767792671 2694.260761527419 2835.3709360749212 3479.641880579561 0.8877898267779967 0.8626386199422175 0.6899832110490207 1.1088796696761538 0.6876611871405673 0.8636765831879775 0.7581574318827685 0.9447994594331938 0.7742925433115747 0.8148456172744617 1.0 11.764723118409142 -10.942555664214902 1.1347594330616726 1.0023513963250834 0.8365345581582516 0.0 0.12623674441687668 0.5868787233062627 1.3109768699516073 0.07837100217649214 0.017277567078727393 1.1414169980097308e-11 10.942555664214902 -0.1658168381668318 AS(ph)SPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIR ddPTM_A549_MK2206_60min_R1 1 ASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIR 38 3 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 AS(0.449)S(0.449)PT(0.03)KT(0.03)S(0.03)PT(0.006)T(0.006)PEASATNSPCTSKPATPAPSEKGEGIR 49.059 0.0009977 2415600.0 0.0 236.37 400.09 317.87 287.83 304.03 282.49 436.75 612.51 594.5 857.71 True False 0.0 248.40022338210107 456.82877810824215 395.7481642697265 245.4905882860954 336.2022528012194 333.81477639021233 498.66064999077906 473.7774629774805 460.2020371018185 644.7169354082556 0.0 0.3852857118214306 0.7085726355535602 0.6138324317774062 0.3807726690638936 0.521472656194963 0.5177695172204992 0.7734567258963208 0.7348612033550341 0.7138047906410333 1.0 9.332522070436395 -7.737546800576829 0.15731397163797786 1.1970373677889838 1.0430927628306535e-18 0.527440703982449 0.1727434064642076 2.7347020889815976 0.22965972566286721 0.5768653190839609 1.008211956947298 1.8300088896987076e-08 7.737546800576829 -1.1970373677889838 AS(ph)SPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIR ddPTM_A549_PD325901_60min_R1 1 ASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIR 38 3 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 AS(0.507)S(0.454)PT(0.018)KT(0.018)S(0.002)PTTPEASATNSPCTSKPATPAPSEKGEGIR 107.63 5.5872e-15 6853600.0 460.56 516.88 794.46 624.73 685.45 1433.4 1273.7 1265.2 748.99 813.36 798.43 True False 507.3157121536477 560.439291590518 848.3768330760767 663.3181532352273 637.3063566741272 1421.726865642255 1322.1713504953836 1239.9645934698003 717.5125549828863 762.0043107911135 700.2281716647817 0.7245005737879875 0.8003666722778122 1.2115719809716792 0.9472885840314003 0.910140983272554 2.030376558918104 1.8882007379850794 1.7708007812964788 1.0246839302066513 1.0882228702387966 1.0 9.451681295390733 AS(ph)SPVEELLTMEDEGNSDMLVVTTK ddPTM_A549_PD325901_60min_R1 1 ASSPVEELLTMEDEGNSDMLVVTTK 25 0 B8ZZD4;Q86VP1-2;Q86VP1 B8ZZD4 TAX1BP1 Tax1-binding protein 1 1 AS(0.5)S(0.5)PVEELLTMEDEGNSDMLVVTTK 49.101000000000006 0.0036630000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)SREDGRPR ddPTM_A549_MK2206_60min_R1 1 ASSREDGRPR 10 2 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 AS(0.5)S(0.5)REDGRPR 41.401 0.018303 21293000.0 1158.0 1082.2 994.62 953.74 913.52 461.66 655.66 511.18 1027.8 1548.7 1540.3 True False 1353.442089618191 1137.2793575500682 1135.6720719888524 1187.4063428150162 779.1424181326264 510.51255477489366 774.7849349994925 583.6413304230941 795.0049410593368 1198.8475943811377 1157.800999882636 1.1689764387449888 0.9822753285455376 0.9808871059050503 1.0255703207506137 0.6729502031969281 0.4409329019638464 0.6691866176294812 0.5040946850816822 0.6866507639395067 1.0354522016328043 1.0 10.177171592260585 -6.747388789987292 24.179597869596442 0.76606579862681 1.0311637264371956 0.41555674233912054 0.17836092580714746 170.43387871857206 293295.95144165936 0.029636769526439875 0.061430171554087955 1.7890035815312545e-07 6.747388789987292 0.26509792781038555 AS(ph)SREDGRPR ddPTM_A549_PD325901_60min_R1 1 ASSREDGRPR 10 2 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 AS(0.5)S(0.5)REDGRPR 43.99100000000001 0.012623 29436000.0 676.83 767.81 875.03 630.89 847.85 614.57 843.01 612.76 996.03 882.09 854.26 True False 745.5412833440888 832.5160433294287 934.414797782845 669.8586424448521 788.2999409237118 609.5651456800339 875.0912068627724 600.5380210990795 954.1703228876272 826.3946868615792 749.1914356003111 0.9951278777589101 1.1112193810148823 1.2472310191775193 0.894108782634586 1.0522009508718742 0.8136306913220415 1.1680475313516905 0.8015815351891752 1.2736001475017809 1.1030487637641062 1.0 9.549190597247325 -8.788108477989269 24.999842474998683 1.1292000113329697 1.0178625163012183 0.11109551136855056 0.14384592012298383 393.92141075844427 369263.6146987093 0.02684100582687606 0.028578398034574418 1.6288891182225224e-09 8.788108477989269 -0.11133749503175139 AS(ph)SRPRPDDLEI ddPTM_A549_PD325901_60min_R1 1 ASSRPRPDDLEI 12 2 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 AS(0.5)S(0.5)RPRPDDLEI 89.507 9.025700000000001e-05 23962000.0 752.24 901.87 963.98 1147.9 895.94 955.84 1092.2 739.98 1222.8 957.68 1273.1 True False 828.606851030181 977.8737500130399 1029.4014796826477 1218.80317592995 833.0122652252055 948.0559559477421 1133.764268674773 725.22051839692 1171.4099684015453 897.2119213613082 1116.5167708458264 0.7421356066174117 0.8758254023110138 0.9219758328420058 1.091612063298105 0.7460812833058927 0.8491193152696976 1.0154475940526004 0.6495384013332136 1.0491646869882072 0.8035812311906592 1.0 10.124789206251842 AS(ph)SRS(ph)PVFTPR ddPTM_A549_MK2206_60min_R1 1 ASSRSPVFTPR 11 1 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 2 AS(0.526)S(0.526)RS(0.945)PVFT(0.003)PR 41.378 0.026113 16145000.0 579.95 475.25 747.94 468.92 605.82 731.35 525.45 663.5 771.72 920.79 805.04 True False 677.831381583826 499.4381950431253 854.0091386894917 583.805421050619 516.7046805249014 808.7409715691605 620.9174634650329 757.5531568835299 596.9266521836071 712.7828994835717 605.1263500263049 1.120148513701908 0.8253453101512018 1.4112906150134892 0.9647661534243896 0.8538789965144308 1.3364828213711144 1.0260955640719358 1.251892529304994 0.986449610329576 1.1779075550958689 1.0 9.241092597491853 AS(ph)SRS(ph)PVFTPR ddPTM_A549_PD325901_60min_R1 2 ASSRSPVFTPR 11 1 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 2 AS(0.579)S(0.579)RS(0.842)PVFT(0.001)PR;AS(0.571)S(0.571)RS(0.857)PVFT(0.001)PR 66.285 0.0015222999999999999 44271000.0 6201.5 5778.4 5452.700000000001 5100.0 6247.9 6408.6 4791.1 6446.4 6258.1 5954.1 5846.2 True False 6831.071714696994 6265.366047296563 5822.753011748767 5415.015417059624 5809.069058084871 6356.410486364562 4973.427932290518 6317.821494897029 5995.0938201289755 5578.157109866936 5127.154462115206 1.3323319523864778 1.2219967417778532 1.135669513133137 1.05614438907028 1.1330005953611044 1.2397540455105045 0.9700171838081764 1.2322276501673042 1.169282857465484 1.0879635382714155 1.0 12.323942646093586 -14.999999999999998 0.18667407126797664 0.3022653592205954 1.196555837243456 0.20294358153133307 0.09371170041187624 45.554768113244215 0.5166725845303798 11.669102004797274 0.09324098490202481 1.000000000000004e-15 14.999999999999998 0.8942904780228605 AS(ph)SRSPVFTPR ddPTM_A549_PD325901_60min_R1 1 ASSRSPVFTPR 11 1 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 AS(0.386)S(0.33)RS(0.284)PVFTPR 63.708999999999996 0.0018376999999999998 101400000.0 1789.0 1976.4 2096.6 2140.3 1964.1 2328.8 1957.4 1872.8 2358.7 2548.3 2145.5 True False 1970.6179630078077 2142.958164176404 2238.8878838799956 2272.5014700260226 1826.1483917771568 2309.835024911179 2031.8899281303786 1835.4455348168221 2259.5720416002 2387.399903104402 1881.6171014450717 1.0473001980553769 1.1388917344185614 1.1898743278643364 1.2077385288860065 0.9705207241019891 1.2275797361414489 1.0798636590674575 0.9754617628672752 1.200867083884846 1.2688021921521078 1.0 10.87775736222466 -11.076927187031297 1.3816074461108774 0.9996771988516991 1.125551262772051 0.0 0.11717507567047016 0.5295718335932192 1.7970413529807912 0.061835842238891325 0.013464239750726201 8.37669712430236e-12 11.076927187031297 0.12587406392035183 AS(ph)SSDMGSTAK ddPTM_A549_PD325901_60min_R1 1 ASSSDMGSTAK 11 0 Q13472-3;K7EJ41;Q13472-2;Q13472 Q13472-3 TOP3A DNA topoisomerase 3-alpha 1 AS(0.538)S(0.454)S(0.008)DMGSTAK 54.7 0.0065429 5803900.0 1335.8 1377.4 1662.8 1612.8 1756.3 1776.4 1735.4 1552.7 1656.8 2191.2 1985.8 True False 1471.4094326360134 1493.4783319857213 1775.6476072286844 1712.4189930654436 1632.943546906075 1761.933587363544 1801.4415966473173 1521.7301804304138 1587.1704576771983 2052.847258047469 1741.5591890233623 0.8448805196573053 0.8575524400197041 1.0195735054083568 0.9832677544687642 0.9376331032549073 1.0116989410802668 1.0343843654590552 0.8737745980851648 0.9113502817939007 1.1787410218303702 1.0 10.766163790178966 -5.694873060234968 8.716627870217652 0.9637369102142574 0.8499410035612139 0.2640581615480606 0.07972780222835563 0.21273299086543987 25.2048133959849 0.007062055524810375 0.02745431260990968 2.0189563974263568e-06 5.694873060234968 -0.11379590665304351 AS(ph)STSTPEPTR ddPTM_A549_MK2206_60min_R1 1 ASSTSTPEPTR 11 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 AS(0.6)S(0.341)T(0.02)S(0.02)T(0.02)PEPTR 46.352 0.035185 1627700.0 426.02 640.41 526.85 380.33 586.31 305.67 231.91 389.27 537.87 531.13 717.39 True False 497.92176081100365 673.0041335877285 601.5652521840772 473.5108670736622 500.0645756801603 338.01579651267554 274.045045108337 444.450214589377 416.04330380189316 411.14736411419483 539.2422640432409 0.9233730254701924 1.2480552405917527 1.1155751177096882 0.8781041447368677 0.9273467771807683 0.6268347625021666 0.5082039435365211 0.8242125000679423 0.7715331893357146 0.7624538941577207 1.0 9.074789764439995 -6.322824871608495 3.6227447746750805 0.8385216652176918 1.1130983159954095 0.4248045443374546 0.15163115289944007 0.21726809811546752 5.687469057606877 0.024667217435280824 0.06285014164152403 4.755269425853132e-07 6.322824871608495 0.27457665077771776 AS(ph)TIFLSK ddPTM_A549_MK2206_60min_R1 1 ASTIFLSK 8 0 Q8N7R7-3;Q8N7R7;Q8N7R7-2;H7BZD2;A0A494C0K2;Q8ND76;Q8ND76-3;R4GNF3;R4GN48 Q8N7R7-3;Q8ND76 CCNYL1;CCNY Cyclin-Y-like protein 1;Cyclin-Y 1 AS(0.499)T(0.076)IFLS(0.425)K 104.52 0.0020553 16589000.0 2204.8 2282.4 2125.6 2084.9 3333.7 2436.5 1985.5 2441.7 3172.9 2545.4 2884.1 True False 2576.916337815363 2398.5644110813882 2427.0420424076588 2595.700593594718 2843.317146125685 2694.3288127821975 2346.2396492717157 2787.8184523926393 2454.243216080143 1970.3923721429228 2167.8983728893786 1.188670267038784 1.1064007617130953 1.1195368162820718 1.1973349978279488 1.3115546289820346 1.2428298514709393 1.0822645925715806 1.2859544004717482 1.1320840712699662 0.9088951755228177 1.0 11.08208141203421 -9.87204382272887 0.7747757335007847 1.0111795154612717 1.1892119900439946 0.5516497221266154 0.07682452491924453 0.3658226163139627 0.4535714271125184 0.030990214875701024 0.015293514520970304 1.3426294755202595e-10 9.87204382272887 0.17803247458272287 AS(ph)TIFLSK ddPTM_A549_PD325901_60min_R1 2 ASTIFLSK 8 0 Q8N7R7-3;Q8N7R7;Q8N7R7-2;H7BZD2;A0A494C0K2;Q8ND76;Q8ND76-3;R4GNF3;R4GN48 Q8N7R7-3;Q8ND76 CCNYL1;CCNY Cyclin-Y-like protein 1;Cyclin-Y 1 AS(0.886)T(0.111)IFLS(0.003)K;AS(0.798)T(0.192)IFLS(0.01)K 139.43 0.0010929 52754000.0 7134.0 7368.5 6947.1 7271.0 8079.3 6410.1 7221.0 7946.8 7602.599999999999 7541.9 7571.7 True False 7858.2384282267785 7989.469354753001 7418.571982305988 7720.113156360888 7511.837840071884 6357.898270861882 7495.799106482815 7788.294839855999 7283.089160753669 7065.703146891295 6640.428900960923 1.183393203274811 1.203155620504703 1.1171826538542506 1.162592548087327 1.1312278095447812 0.957452954573739 1.128812493632469 1.1728602106904527 1.0967799323474041 1.0640431894194111 1.0 12.69706071197312 -14.999999999999966 0.022391495406556938 1.0447295592483981e-12 1.8758094220727506 0.34434522698001857 0.05944744130289431 1227.8036140831268 2.133524830577481 123.70678941320709 64.1631819643325 1.0000000000000778e-15 14.999999999999966 1.8758094220717059 AS(ph)TLLRDEELEEIKK ddPTM_A549_PD325901_60min_R1 1 ASTLLRDEELEEIKK 15 2 H0YLX1;H0YKE7;F5GX29;H0YNG9;Q99653 H0YLX1 CHP1 Calcineurin B homologous protein 1 1 AS(0.5)T(0.5)LLRDEELEEIKK 45.863 0.0078046999999999995 8108000.0 998.1 1037.7 1006.3 876.44 1109.0 970.57 934.18 980.26 1012.5 1153.6 1251.1 True False 1099.4263772376146 1125.1506208084666 1074.5935693734807 930.5757082603411 1031.1076658423028 962.6659997114576 969.730731102911 960.7079453009068 969.9481460635952 1080.7614991253927 1097.2226313763363 1.0020084764916979 1.0254533479655792 0.9793760524475602 0.8481193165812154 0.9397433450209645 0.8773661535798863 0.8838048937128633 0.8755815983268701 0.8840030439828878 0.984997454682196 1.0 10.099640569377689 -6.011223377687453 21.813041936189617 0.9239636514428222 1.0109019908729262 0.42617067470615955 0.04624104411113107 92.70393454657035 180181.95211050974 0.007835049762534968 0.0222291404071805 9.744882845128749e-07 6.011223377687453 0.08693833943010398 AS(ph)TPDWVSEGPQPGLR ddPTM_A549_PD325901_60min_R1 1 ASTPDWVSEGPQPGLR 16 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AS(0.562)T(0.438)PDWVSEGPQPGLR 87.088 4.2016000000000006e-06 5443300.0 649.28 559.71 563.24 658.54 409.42 596.93 680.6 585.54 420.1 648.83 708.68 True False 715.1944276253265 606.8787260024162 601.4648534372649 699.2165201471458 380.6637516223226 592.068799991511 706.5006054386103 573.8609453527565 402.4446579371023 607.8627630699796 621.516852692656 1.15072411074104 0.9764477397083898 0.9677369983315529 1.1250161876027402 0.6124753495792385 0.9526190600084866 1.1367360392204509 0.9233232258571343 0.6475201053576478 0.9780310227091646 1.0 9.279649700869838 -4.676078126842786 0.46305881409188066 0.8539921082909915 1.4895633026002932 0.09209958326659673 0.16154566944445925 9.777075406807903 0.9437530661895654 0.03747361283016635 3.827529185574511 2.1082488551233623e-05 4.676078126842786 0.6355711943093018 AS(ph)TPYIEK ddPTM_A549_PD325901_60min_R1 1 ASTPYIEK 8 0 Q969Z0-2;Q969Z0;C9J618;C9J5A2;C9J347;C9J7P5;C9IZN7 Q969Z0-2 TBRG4 Protein TBRG4 1 AS(0.6)T(0.4)PYIEK 100.02 0.0023951000000000003 21760000.0 4470.8 5312.7 4564.5 5307.5 4957.7 4625.1 4358.8 4539.7 5826.5 5837.4 6169.4 True False 4924.672324770995 5760.419873922268 4874.274418568274 5635.332220792931 4609.48825513651 4587.434719047015 4524.676519226883 4449.152122174244 5581.63246719954 5468.825567783083 5410.602911048811 0.9101891980863144 1.064653970846596 0.9008745418398164 1.0415349848138382 0.8519361577475273 0.8478601727876146 0.8362610588160504 0.8223024670852818 1.0316100735837546 1.0107608445290595 1.0 12.40157364919772 -8.792611373443254 24.997887158723348 1.0149270033660616 0.9123319147048344 0.27689990855825974 0.07522460739536917 195.21463676428968 156548.4082718857 0.013616032135253076 0.014494706252166043 1.6120875595791132e-09 8.792611373443254 -0.10259508866122713 AS(ph)VRGS(ph)SEEDEDARTPDR ddPTM_A549_MK2206_60min_R1 1 ASVRGSSEEDEDARTPDR 18 2 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 2 AS(0.931)VRGS(0.511)S(0.502)EEDEDART(0.056)PDR 50.653 0.014301 12651000.0 432.44 766.08 465.28 656.17 781.1 309.99 624.12 622.63 930.0 959.42 1199.0 True False 505.42529985707347 805.0701998077591 531.2637003629255 816.9316794565904 666.2012247169134 342.7929360452918 737.5145252598653 710.8897092244044 719.3564849048297 742.6863556538715 901.2552092834387 0.5608015295233879 0.8932766119020233 0.5894708789370744 0.9064376782977027 0.7391926480475938 0.38035057386002386 0.8183192925411674 0.7887773650591288 0.7981717914027578 0.8240577674378818 1.0 9.815791882974969 -9.821726504505953 0.5416600096841008 1.0017089232582777 0.7019427563443148 0.18878433654197047 0.15351963038813612 0.7006021650324932 0.42475120778270603 0.09256449752860103 0.03734640270096499 1.5075561457443818e-10 9.821726504505953 -0.29976616691396285 AS(ph)VRGSSEEDEDAR ddPTM_A549_PD325901_60min_R1 1 ASVRGSSEEDEDAR 14 1 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 AS(0.511)VRGS(0.435)S(0.054)EEDEDAR 41.553999999999995 0.042388 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AS(ph)VRGSSEEDEDARTPDR ddPTM_A549_MK2206_60min_R1 1 ASVRGSSEEDEDARTPDR 18 2 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 AS(0.331)VRGS(0.331)S(0.331)EEDEDART(0.006)PDR 45.047 0.013706999999999999 3255200.0 168.78 236.02 330.35 200.37 333.51 127.98 157.27 249.93 393.78 580.93 414.07 True False 197.26593772517995 248.03240987707198 377.1985974357214 249.46065899495105 284.45112079802556 141.52275865375148 185.84392326414644 285.3583428785243 304.5894587374449 449.6975095265926 311.2449912493692 0.6337963445880184 0.7969041007903277 1.2119025463561925 0.8014929268213778 0.9139138903286754 0.45469891125208045 0.5970985188168006 0.9168287069715298 0.9786164189013666 1.4448345264014077 1.0 8.281906810384072 -8.507266540480837 17.696268855441875 0.9876829502265938 0.7829375210205586 0.27156950125706014 0.2287210401767949 18.91547625041693 21440.186906940016 0.031449559348860553 0.03729934093868687 3.1098071627068214e-09 8.507266540480837 -0.20474542920603522 AS(ph)VRGSSEEDEDARTPDR ddPTM_A549_PD325901_60min_R1 1 ASVRGSSEEDEDARTPDR 18 2 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 AS(0.547)VRGS(0.396)S(0.057)EEDEDARTPDR 60.036 0.00069377 7060600.0 465.66 499.95 332.7 808.06 628.01 443.19 517.01 435.74 335.46 450.93 375.12 True False 512.9334603992264 542.0825410746777 355.27902268762523 857.9720309625884 583.9007441168848 439.58080757917594 536.6850984687272 427.0488238685828 321.361782793574 422.45820284380477 328.98261808160134 1.5591506426397204 1.6477543532109005 1.0799325045176134 2.6079555083052313 1.7748680690845895 1.3361824711059405 1.6313478857889296 1.2980893226482166 0.9768351430465634 1.284135330028341 1.0 8.361867550422371 -8.36990662769793 1.3788081163857593 0.9812340363434311 1.6975423716508322 0.32377781196168676 0.363694265701837 0.2696658257329948 0.9937626968914444 0.06430041304919755 0.08020285420663159 4.266712422643778e-09 8.36990662769793 0.7163083353074011 AS(ph)WESLDEEWRAPQAGSR ddPTM_A549_PD325901_60min_R1 1 ASWESLDEEWRAPQAGSR 18 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 AS(0.5)WES(0.5)LDEEWRAPQAGSR 63.225 0.00075473 1810500.0 948.65 821.12 653.58 884.1 966.16 625.71 692.94 867.46 909.03 828.31 889.65 True False 1044.956249640781 890.3186641208908 697.935869095816 938.7088490632179 898.3002546710549 620.6144252134892 719.3102108913173 850.1578297907947 870.8266303369774 776.0103652397308 780.2286899560048 1.3392948286735054 1.1410996232029018 0.8945273072888038 1.203120137912577 1.1513294322997887 0.7954263066748855 0.9219222775977097 1.0896264655927137 1.116117160964795 0.9945934765401772 1.0 9.607753238760433 -5.373420433399775 3.510929488436526 1.0398114377068823 1.345595991273962 0.3905007428717381 0.11573560135958619 0.20648344347095846 4.068610126226251 0.015942227428488994 0.13489226419204087 4.232330426605056e-06 5.373420433399775 0.30578455356707956 ASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELS(ph)PEEQR ddPTM_A549_PD325901_60min_R1 1 ASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQR 43 2 C9JQV0;Q9BRJ6 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 ASAEGPLLGPEAAPS(0.009)GEGAGS(0.009)KGEAVLRPGLDAEPELS(0.982)PEEQR 51.747 0.00079312 5287200.0 746.05 899.21 875.78 965.41 932.39 906.96 1110.8 997.46 1333.0 1158.8 1002.5 True False 821.788446787018 974.9895824777692 935.2156972929621 1025.04118309481 866.9021429708794 899.5740184616299 1153.0721018530826 977.5648778077679 1276.9786456323673 1085.6331702379553 879.1988553710956 0.9347014520852104 1.1089522882354548 1.06371350642651 1.1658809344811496 0.9860137301986978 1.0231746924669667 1.3115031881682666 1.111881426864635 1.4524343814043925 1.2347982070332963 1.0 9.780045697818558 -7.746800727924133 24.97372227184117 1.2164966877039523 1.0532668085598569 0.34457859318457584 0.11993224896115265 319.9960803612952 545916.0754293873 0.02593316015132287 0.03837402740450758 1.7914276457786318e-08 7.746800727924133 -0.16322987914409537 ASAGRLT(ph)PESQSK ddPTM_A549_PD325901_60min_R1 2 ASAGRLTPESQSK 13 1 A0A0D9SGJ6;J3KQV8;O43426;H7BZ56;H7BZC2;J3KPK1;C9JFZ1;O43426-4;O43426-2 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 AS(0.001)AGRLT(0.995)PES(0.003)QS(0.001)K;AS(0.001)AGRLT(0.98)PES(0.014)QS(0.005)K 60.541000000000004 0.0031892 90115000.0 20128.7 20404.6 20581.2 20656.8 24626.0 22195.0 20125.0 23171.0 20846.6 21163.2 23153.0 True False 22172.150806034246 22124.167251949926 21977.963996809583 21932.723621003377 22896.35471508796 22014.251278728792 20890.86788782257 22708.836227702155 19970.489898004293 19826.95194026568 20305.327778959567 1.0919375962504327 1.0895744945755097 1.0823742534992815 1.0801462483028776 1.127603305119419 1.084161335309249 1.0288367720648046 1.118368364938837 0.9835098509809709 0.9764408708935208 1.0 14.309570695718985 -8.770046637260496 24.995024994420575 0.9922129773563613 1.0867234514273794 0.7735933430684342 0.024332235141239222 60.00732484364413 174257.71899684213 0.004049290396290859 0.004343846198162366 1.698061294217547e-09 8.770046637260496 0.09451047407101809 ASAIS(ph)IK ddPTM_A549_PD325901_60min_R1 2 ASAISIK 7 0 Q8WW12;Q8WW12-2 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 AS(0.003)AIS(0.997)IK;ASAIS(1)IK 92.06200000000001 0.012324 8420100.0 4067.8999999999996 4307.299999999999 4319.4 4245.7 5372.1 4264.7 4655.9 4891.4 4296.3 5105.9 5044.9 True False 4480.870213370298 4670.291287470661 4612.540458662243 4507.947246315698 4994.782228738898 4229.96969715678 4833.082822306236 4793.837189770929 4115.741451785705 4783.512602621654 4424.409282256001 1.0127612360232434 1.055573973728146 1.042521196481695 1.0188811564957891 1.1289150505967804 0.9560529840946188 1.0923679329779032 1.0834976793391407 0.9302352448024641 1.0811641277866924 1.0 12.111269133654547 -8.760509057743256 24.99999959962151 0.9670555316959917 1.0488675316224796 0.010265450949480948 0.05709930194218735 18.19193681425144 488855.60693204496 0.007877497177672645 0.008685962106453726 1.7357650609879727e-09 8.760509057743256 0.08181199992648791 ASALGS(ph)DGVR ddPTM_A549_MK2206_60min_R1 1 ASALGSDGVR 10 0 O00159-3 O00159-3 MYO1C Unconventional myosin-Ic 1 AS(0.001)ALGS(0.999)DGVR 78.342 0.001338 10782000.0 3255.5 3243.0 2890.1 2892.3 4824.1 2952.1 2667.5 3733.1 4925.3 5130.4 4747.2 True False 3804.9488106666854 3408.054848027048 3299.9596381080046 3600.913629840283 4114.481280446629 3264.489262554616 3152.150221320724 4262.278357139269 3809.7274140879103 3971.4390767824543 3568.339223945238 1.0663080418850557 0.9550815194803773 0.9247886568529472 1.0091287301600855 1.153052168593311 0.9148483531633861 0.8833661890014017 1.194471178226939 1.067647209245927 1.1129656760579898 1.0 11.80103705615365 -8.224459928701958 24.999980724851913 1.0450266872452234 0.9875623541658494 0.18870957404745525 0.087739833192433 1141.6719062363497 771828.2682474022 0.014043664524481591 0.018130115969782947 5.964033459851014e-09 8.224459928701958 -0.05746433307937404 ASALGS(ph)DGVR ddPTM_A549_PD325901_60min_R1 1 ASALGSDGVR 10 0 O00159-3 O00159-3 MYO1C Unconventional myosin-Ic 1 AS(0.001)ALGS(0.999)DGVR 73.327 0.0017012000000000002 28056000.0 5094.6 4626.8 5248.5 4430.2 5901.2 4874.0 5131.7 5035.4 5304.1 5622.9 6001.8 True False 5611.800041553702 5016.716673756011 5604.694771794414 4703.843392285794 5486.720070034806 4834.307759969552 5326.989651673988 4934.964996805117 5081.187122504609 5267.869134389884 5263.6166485448775 1.0661490789047259 0.9530930933473049 1.0647991953106668 0.8936523509146829 1.042385955586565 0.9184384203408871 1.0120398211649075 0.9375616284991773 0.9653414110066885 1.000807901891218 1.0 12.361838705463489 -3.5092764626943986 1.9361143576581687 0.9795811754415065 67.20483702563854 0.19405981468349964 0.04979930530607211 1411.0060277672546 8.282131067837092 0.0059733654249137435 414208.30385044613 0.0003095448174966225 3.5092764626943986 66.22525585019703 ASAPERT(ph)PS(ph)PAPK ddPTM_A549_MK2206_60min_R1 2 ASAPERTPSPAPK 13 1 Q96P11-2;Q63ZY6;Q3KNT7-3;Q63ZY6-6 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 2 ASAPERT(1)PS(1)PAPK;AS(0.019)APERT(0.981)PS(1)PAPK 93.75399999999999 9.3001e-05 39344000.0 4311.9 4482.7 4262.7 3568.8 4764.5 4357.2 3747.2999999999997 3590.2 6341.0 5865.0 6379.4 True False 5039.643304166392 4710.850282840223 4867.214957739519 4443.156160209517 4063.6483614949843 4818.276011924724 4428.135904163132 4099.121844526377 4904.773624496263 4540.092426580596 4795.218917516904 1.0509725188471808 0.98240567612701 1.0150141300034528 0.9265804620470394 0.8474375062732804 1.0048083507352694 0.923448122042391 0.854835183760289 1.0228466538991905 0.946795653060941 1.0 12.227380965183183 ASAPERT(ph)PS(ph)PAPK ddPTM_A549_PD325901_60min_R1 2 ASAPERTPSPAPK 13 1 Q96P11-2;Q63ZY6;Q3KNT7-3;Q63ZY6-6 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 2 AS(0.12)APERT(0.936)PS(0.944)PAPK;AS(0.008)APERT(0.993)PS(0.999)PAPK 52.172 0.013113999999999999 65183000.0 5136.0 5165.3 4956.200000000001 6109.4 5858.3 6623.9 4920.0 6206.6 6245.1 5500.7 5932.9 True False 5657.402939076633 5600.597958621925 5292.5575360517205 6486.763762545896 5446.833218037844 6569.957154547049 5107.233292327302 6082.8044940164955 5982.640164920258 5153.384863244667 5203.190911751793 1.0872948994239224 1.0763775640006903 1.0171753498604263 1.2466895550372865 1.0468255557826578 1.2626784728786933 0.9815579283843374 1.169052721144256 1.1498021630165485 0.9904277876111302 1.0 12.345180927280287 -10.848032204127161 1.067148506596722 0.9992506075809593 1.1172418827260875 0.22948802487252207 0.08419418847845496 0.6192867204110516 1.2392027411931088 0.055037090916834376 0.013114141740409266 1.4189522985825326e-11 10.848032204127161 0.1179912751451282 ASAPS(ph)PEDSVFADTGK ddPTM_A549_MK2206_60min_R1 2 ASAPSPEDSVFADTGK 16 0 J3KQ40;O95759-2;O95759 J3KQ40 TBC1D8 TBC1 domain family member 8 1 ASAPS(0.965)PEDS(0.035)VFADTGK;ASAPS(0.748)PEDS(0.252)VFADTGK 142.1 3.1e-14 8541200.0 3323.1 4215.8 3757.0 3528.2 4730.700000000001 4151.1 3554.2 3425.2 5424.5 5150.8 5942.4 True False 3883.958038005367 4430.366212862297 4289.799093585609 4392.609158386916 4034.8202967203965 4590.36664672283 4199.952133690018 3910.7325892350686 4195.859411146504 3987.230702614037 4466.738078103341 0.869528942618137 0.9918571752797989 0.9603874278223039 0.9834042385247935 0.903303535190417 1.0276775952513393 0.9402727583868976 0.8755231492990603 0.9393564918693739 0.8926493187859111 1.0 12.125005944608803 -8.845455117385324 0.005857269666874767 1.9190395865728678 4.5432036062067825e-06 0.0 0.05413524264186674 5364.298834736345 23.97939178654184 3939.624122988518 3915.2007616708706 1.4273973384042656e-09 8.845455117385324 -1.9190350433692616 ASAPS(ph)PEDSVFADTGK ddPTM_A549_PD325901_60min_R1 1 ASAPSPEDSVFADTGK 16 0 J3KQ40;O95759-2;O95759 J3KQ40 TBC1D8 TBC1 domain family member 8 1 AS(0.001)APS(0.66)PEDS(0.339)VFADTGK 91.65700000000001 9.3747e-06 4681800.0 2786.4 2589.5 2313.1 2951.9 3196.6 3065.6 2414.3 3305.3 2745.2 2407.5 3639.8 True False 3069.2732767607354 2807.726252851041 2470.0808758002595 3134.232158748686 2972.0818436713316 3040.6347699964413 2506.1775076556532 3239.373198542311 2629.8287906901537 2255.4900391334804 3192.127674593228 0.9615133195296932 0.8795783060929192 0.773803909993989 0.9818630325142242 0.9310660934168503 0.9525417151066516 0.7851119263188665 1.0148006373069345 0.823848247556474 0.7065788931581181 1.0 11.640302640426244 -11.085067821571112 1.4088110874449398 1.0000266320222368 0.8911334488734566 0.0 0.11543054907357234 0.5177728154906471 1.8346976003393898 0.05289387931688148 0.011593511942153314 8.22114254499801e-12 11.085067821571112 -0.10889318314878027 ASAPS(ph)PNAQVACDHCLK ddPTM_A549_MK2206_60min_R1 2 ASAPSPNAQVACDHCLK 17 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 AS(0.013)APS(0.987)PNAQVACDHCLK;AS(0.051)APS(0.949)PNAQVACDHCLK 192.27 1.9478999999999997e-40 123281000.0 11356.2 13317.599999999999 11990.599999999999 10840.2 15114.400000000001 12216.8 11746.3 11582.2 17735.0 16819.7 17688.6 True False 13272.84892756659 13995.408955931249 13691.047381300936 13496.049486635067 12891.09178192461 13509.573667144485 13880.450663430034 13224.012318999889 13718.050816975434 13020.11808821103 13296.032439475432 0.9982563586532769 1.052600391856701 1.0297092342113066 1.015043363354454 0.9695442486776304 1.0160605224634573 1.0439543319869984 0.994583337487827 1.031740173575919 0.9792483695778883 1.0 13.698708186641978 -6.285248311818658 6.4902182366708905 1.012711845486383 1.0294606199088658 0.08306926601632436 0.02399956018183841 0.32582945909834665 55.352396603714844 0.0031281909236806783 0.007539872798245673 5.185034950736455e-07 6.285248311818658 0.016748774422482793 ASAPS(ph)PNAQVACDHCLK ddPTM_A549_PD325901_60min_R1 4 ASAPSPNAQVACDHCLK 17 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 AS(0.016)APS(0.984)PNAQVACDHCLK;AS(0.009)APS(0.991)PNAQVACDHCLK;AS(0.001)APS(0.999)PNAQVACDHCLK;AS(0.009)APS(0.991)PNAQVACDHCLK 197.4 1.3226e-48 204068000.0 25840.7 27229.3 32429.6 28174.0 25700.2 25417.7 29615.0 31073.3 21555.4 27746.4 31352.0 True False 28464.02884108208 29524.008672236643 34630.467671026774 29914.243992203512 23895.106612876803 25210.706678411567 30742.01503094983 30453.51865496771 20649.501498922687 25994.487568769764 27495.902756702813 1.03520983082264 1.0737602956149321 1.2594773838653008 1.087952785434956 0.8690424469533656 0.9168895781123545 1.1180580358815713 1.107565695312328 0.7510028560123874 0.9453949484321972 1.0 14.746929034078484 -7.159175613375705 0.6624443122552883 0.9002545544733358 1.1245428589317965 0.14668205135652368 0.12262406466396131 0.8634358179987689 0.7101012950886137 0.029008265657200185 0.09133470608807441 6.931454657537751e-08 7.159175613375705 0.2242883044584607 ASAQASLASKDKT(ph)PK ddPTM_A549_MK2206_60min_R1 1 ASAQASLASKDKTPK 15 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 ASAQAS(0.066)LAS(0.036)KDKT(0.898)PK 69.52199999999999 0.00076424 10114000.0 1450.8 2458.7 1792.0 2094.1 2792.7 1827.3 2055.9 1353.8 2595.1 3065.3 3002.2 True False 1695.6595713454863 2583.837328043201 2046.132546102052 2607.1545940077212 2381.897529467321 2020.663673136427 2429.4304179993546 1545.7052958386187 2007.3139935231432 2372.846601056693 2256.670883495196 0.7513987014000023 1.1449774740928462 0.9067040130074013 1.1553100689497469 1.0554917630603584 0.8954179751753457 1.0765550421054682 0.6849493681792829 0.8895023231806661 1.0514810194127913 1.0 11.139980313572188 -7.263550623155166 24.93084985751545 0.9321523624987462 1.013813200233528 0.05370505484220078 0.1424681176083499 389.4668566434134 4599063.829941746 0.019599218800311135 0.03226286392071587 5.450663568042499e-08 7.263550623155166 0.08166083773478183 ASAQASLASKDKT(ph)PK ddPTM_A549_PD325901_60min_R1 2 ASAQASLASKDKTPK 15 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 ASAQAS(0.001)LAS(0.047)KDKT(0.952)PK;ASAQAS(0.001)LAS(0.07)KDKT(0.929)PK 73.809 0.00026351 32165000.0 5143.9 4238.4 4657.1 4775.4 5600.4 5324.8 5691.3 6346.5 5615.2 4522.6 5639.9 True False 5666.104941260963 4595.584842666094 4973.15881141731 5070.365612279714 5207.047224331138 5281.436594231811 5907.8855358988585 6219.914078767064 5379.212671384 4237.0422641682535 4946.22805427176 1.1455405774037226 0.9291089679330826 1.0054447059153069 1.0250974190121993 1.0527309228764985 1.067770538738211 1.1944223903700868 1.2575065303338162 1.0875383448481104 0.8566208872049429 1.0 12.27211304383635 -6.891715819489562 2.6725171458060557 1.0744317679451243 1.017100283330081 0.04501104579789528 0.10681702615840737 0.6491939914739154 9.396158614070789 0.014308622394691828 0.029304696534608425 1.283169950015347e-07 6.891715819489562 -0.05733148461504323 ASAS(ph)PDRIPSLPQETVDQEPK ddPTM_A549_PD325901_60min_R1 1 ASASPDRIPSLPQETVDQEPK 21 1 A0A494C1R1;A0A2R8Y5U1;Q76L82;Q8IXJ9 A0A494C1R1 ASXH1;ASXL1 Putative Polycomb group protein ASXL1 1 AS(0.031)AS(0.969)PDRIPSLPQETVDQEPK 205.26 1.3003e-56 18286000.0 3857.9 3845.0 3630.9 4451.2 5164.7 4180.4 4510.2 4394.8 3909.2 4432.3 4685.4 True False 4249.551167964125 4169.031644028672 3877.3147083754084 4726.140514591335 4801.949289247742 4146.356208407204 4681.838129076141 4307.142266346095 3744.9099186091903 4152.443821578952 4109.125503197737 1.0341740997341424 1.014578805340532 0.9435863434587402 1.1501572563099944 1.1686061390704292 1.0090604935722927 1.1393757930812083 1.0481895145315616 0.9113642101451725 1.0105419798805135 1.0 12.004615679435338 -8.649808182926044 6.554699693315678 0.958319096947468 1.0659528981609014 0.24709352482900648 0.06850048744743192 0.18972459568391895 10.344819166733114 0.012150703289915842 0.013769358023603856 2.2397101444231756e-09 8.649808182926044 0.10763380121343347 ASAS(ph)PGENDSGTGGEEPQR ddPTM_A549_MK2206_60min_R1 1 ASASPGENDSGTGGEEPQR 19 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 AS(0.156)AS(0.756)PGENDS(0.044)GT(0.044)GGEEPQR 57.498999999999995 0.006276100000000001 5317100.0 173.89 311.15 228.19 0.0 314.74 189.93 136.13 189.47 347.45 199.64 190.0 True False 203.23838079767467 326.9862059708961 260.55077326731436 0.0 268.44216293355703 210.02826653466965 160.8630589047386 216.32795272753947 268.75312976363756 154.5411853439983 142.8177562667668 1.4230610122319052 2.2895346805485746 1.8243583996701092 0.0 1.8796133614656332 1.470603320096708 1.1263519544745215 1.514713284834585 1.8817907295899419 1.082086635329388 1.0 7.158031547891693 -6.03024138177078 24.997761528539932 1.3562365620723413 1.9064610463388258 0.18261565205711627 0.5276907928954393 881.3567519987465 728536.4591756315 0.07472486230538274 0.1980110926253892 9.327357402493231e-07 6.03024138177078 0.5502244842664845 ASAS(ph)PSTSSTSSRPK ddPTM_A549_PD325901_60min_R1 1 ASASPSTSSTSSRPK 15 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;F5H858 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 AS(0.001)AS(0.722)PS(0.105)T(0.105)S(0.019)S(0.019)T(0.019)S(0.004)S(0.004)RPK 67.964 0.00076897 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASASRPQPAPADGADPPPAEEPEARPDGEGS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 ASASRPQPAPADGADPPPAEEPEARPDGEGSPGK 34 2 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK 111.61 2.2477e-15 121695000.0 3387.6 3512.0 3402.8 2573.3 4929.4 3504.7 3094.3 3256.3 4488.9 4781.4 5399.299999999999 True False 3959.3440611317665 3690.745799035152 3885.3682075201236 3203.758615519827 4204.291789936692 3875.5650277684213 3656.49425673204 3717.890497000513 3472.171317300312 3701.278419173478 4058.5047969008074 0.9755671754177146 0.9093855948756085 0.9573398091058323 0.7893938225639922 1.0359213553590505 0.9549243432526964 0.9009461463552404 0.9160739442367057 0.8555296817566319 0.9119807920394433 1.0 11.986732603352662 -11.107214981656805 1.4698889776867001 0.9997082268601135 0.9131992933201926 0.0 0.06640094874371066 0.5166976768607868 2.007291277159616 0.043088068506090926 0.009504606770298348 7.81240983976195e-12 11.107214981656805 -0.08650893353992095 ASASRPQPAPADGADPPPAEEPEARPDGEGS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 ASASRPQPAPADGADPPPAEEPEARPDGEGSPGK 34 2 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK 154.27 2.3752999999999996e-51 166431000.0 8851.2 9191.2 9481.7 8888.3 11288.2 9762.4 11292.5 9066.7 10353.2 11040.2 10247.599999999999 True False 9749.767308090944 9965.774680519211 10125.185180093948 9437.310104206093 10495.355774175916 9682.898251113398 11722.242266993113 8885.857555811444 9918.091008222831 10343.119887867684 8987.210164888615 1.084849149982216 1.108884125070722 1.1266216094123618 1.0500822759298472 1.167810208242303 1.0774086811658983 1.3043249297529247 0.9887225727208276 1.1035783993314185 1.1508710376303828 1.0 13.133657624437076 -10.367126975326876 0.5719359620000322 0.9919560781445635 1.1179910211786555 0.0 0.08634463153376619 1.0634835348592908 0.5843321848084985 0.0668437495100745 0.016104370997975244 4.294108609145368e-11 10.367126975326876 0.1260349430340919 ASATSTSKPNS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ASATSTSKPNSPR 13 1 I3L4X5;Q70CQ4 I3L4X5 USP31 Ubiquitin carboxyl-terminal hydrolase 31 1 ASATST(0.001)S(0.004)KPNS(0.995)PR 55.097 0.0051545 26124000.0 2595.0 2330.8 2634.7 2288.4 2508.7 2802.4 2597.8 2857.1 2422.4 2792.1 2983.6 True False 2858.4424896619685 2527.224695943313 2813.5065857381605 2429.749270666518 2332.4975665451634 2779.57818353276 2696.6607005707065 2800.112899148411 2320.594952122916 2615.8063294972326 2616.6361145987044 1.092411158630037 0.9658296321156203 1.07523800120356 0.92857744227808 0.8914107519695694 1.0622715814495456 1.0305830014060915 1.0701193350982414 0.886861929014845 0.999682880971931 1.0 11.353497593012357 -8.761603318090138 24.99999999099803 0.946573692141628 1.0101077667890153 0.09300231629300015 0.067213823464471 6.416573218476101 978449.497306232 0.012232884412326818 0.013438326897528604 1.7313970846457775e-09 8.761603318090138 0.06353407464738725 ASAVS(ph)ELSPRERS(ph)PALK ddPTM_A549_MK2206_60min_R1 1 ASAVSELSPRERSPALK 17 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 AS(0.01)AVS(0.94)ELS(0.056)PRERS(0.994)PALK 63.726000000000006 0.00090206 21463000.0 1405.1 1665.9 1855.9 1356.5 1029.2 998.69 1162.0 658.63 1287.8 2629.6 2544.2 True False 1642.246528603214 1750.6871943657914 2119.0945269591525 1688.842560895599 877.8060433729954 1104.3707129232307 1373.1203588283722 751.9928194697803 996.1153561940204 2035.5715336634835 1912.4049236521469 0.8587336856814782 0.915437506311414 1.1080783681064195 0.8830988354026993 0.4590063707306488 0.5774774469907755 0.7180071238292488 0.39321840796858487 0.5208705247901814 1.0644040435621362 1.0 10.901172309808477 -6.537491790594511 24.57645865624378 0.7009186021138843 0.9627803230043825 0.2817538027193429 0.20380425085207948 225.2906490487349 378896.65399147174 0.032918727396499835 0.06854882519265722 2.900736030366624e-07 6.537491790594511 0.2618617208904982 ASAVS(ph)ELSPRERS(ph)PALKSPLQSVVVR ddPTM_A549_PD325901_60min_R1 2 ASAVSELSPRERSPALKSPLQSVVVR 26 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 AS(0.007)AVS(0.95)ELS(0.049)PRERS(0.989)PALKS(0.005)PLQSVVVR;AS(0.081)AVS(0.789)ELS(0.131)PRERS(1)PALKSPLQSVVVR 126.11 1.4887e-18 57587000.0 2460.4 2294.2 3549.1 3646.6 2466.3999999999996 6386.5 5368.4 5149.1 5329.0 3996.6 3626.3999999999996 True False 2710.1779967492516 2487.5402854956005 3789.963268472048 3871.8421999705147 2293.1685726180854 6334.49046143733 5572.6973997012 5046.3971611091965 5105.040662096692 3744.253993935976 3180.3757896436305 0.8521565299215582 0.7821529435596465 1.1916715253629584 1.2174165746634504 0.7210369856560381 1.9917427626208684 1.7522135018911196 1.5867298378832957 1.6051690113855148 1.1772992380738534 1.0 11.634981527474897 -7.223778849009878 24.982746296102704 1.4005011438365609 0.9713636281666292 0.4451991868497134 0.2987566945689983 630.0006258562252 417921.79715034086 0.05333365534470428 0.09237521540137725 5.973393856993576e-08 7.223778849009878 -0.42913751566993164 ASAVSELS(ph)PR ddPTM_A549_MK2206_60min_R1 4 ASAVSELSPR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVS(0.004)ELS(0.996)PR 193.83 2.4549e-15 2782562900.0 14369.4 15432.5 13744.100000000002 13307.9 19463.899999999998 14623.599999999999 13184.2 13901.5 21319.0 20806.399999999998 20131.7 True False 16794.60342189952 16217.94833246298 15693.22004848283 16568.33609741434 16600.78609367241 16171.059645639938 15579.59848095097 15872.080196558243 16490.280539447365 16106.21978932762 15132.443283345634 1.1098408305539935 1.0717336274646425 1.037057912898598 1.0948883658231854 1.0970327648240912 1.0686350738507229 1.0295494381992802 1.0488775605738851 1.0897302061985015 1.064350249840599 1.0 13.885357323362184 -10.898038905034142 0.8865783889417034 0.9948733549234271 1.0718973561021774 0.0698200327352051 0.03066767617188616 0.45228784077036444 0.5581176192632624 0.024711744983185284 0.004516057760029585 1.2646230547424453e-11 10.898038905034142 0.0770240011787503 ASAVSELS(ph)PR ddPTM_A549_PD325901_60min_R1 6 ASAVSELSPR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR 175.15 1.0425e-10 3984567600.0 43725.9 45316.1 42242.2 43613.5 51109.5 45357.5 44119.49999999999 45598.4 47590.799999999996 49847.5 51549.4 True False 48164.92117869375 49135.04678386678 45109.00971498409 46307.40684155489 47519.74503820306 44988.12355823122 45798.49171561675 44688.90414074721 45590.72417746501 46700.12034297243 45209.15059857033 1.0653799184675876 1.086838530105465 0.9977849421574974 1.024292786492195 1.051108999152614 0.9951110109919628 1.0130358812152744 0.9884924522815615 1.0084401846494047 1.032979379719849 1.0 15.464327191726536 -4.464670279212516 0.4438395651180677 1.002433371963817 1.2078423442876784 0.45950414088796676 0.022384435247116932 4.302428029400589 0.3367799645427805 0.0039831326285510995 0.543926924956007 3.430281181466774e-05 4.464670279212516 0.20540897232386146 ASAVSELS(ph)PRER ddPTM_A549_MK2206_60min_R1 1 ASAVSELSPRER 12 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASAVS(0.001)ELS(0.999)PRER 97.69 0.00021025 3539400.0 1583.3 2387.7 2075.1 2091.6 1957.1 1595.3 1705.2 1276.1 2527.8 3270.8 3223.8 True False 1850.522332031505 2509.2237313087235 2369.380383044849 2604.042093895493 1669.2131825546935 1764.1135871255642 2015.012767533684 1456.991082892348 1955.2573360671258 2531.9240083307445 2423.241487646329 0.7636557650013245 1.0354823256785308 0.9777731171754597 1.07461105596404 0.6888348483072498 0.7279974348900038 0.8315360965080069 0.60125707252871 0.8068767995410348 1.0448500577587823 1.0 11.242722468101656 -4.952356886041862 14.444827253462789 0.8793552002774346 0.1995257724032951 0.044679588751382115 0.15321282412995008 643695.3366111519 5869573.108573893 0.021489422723795792 11715239.588373652 1.1159458307022705e-05 4.952356886041862 -0.6798294278741395 ASAVSELS(ph)PRER ddPTM_A549_PD325901_60min_R1 2 ASAVSELSPRER 12 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASAVSELS(1)PRER;ASAVSELS(1)PRER 140.03 1.0545e-09 105311000.0 4614.7 5352.5 5290.0 6208.1 5901.799999999999 7784.900000000001 6523.0 7449.9 7009.0 6402.799999999999 6750.8 True False 5083.180946837415 5803.573959600382 5649.0112113541845 6591.560237381935 5487.277928104691 7721.502355475367 6771.236334522558 7301.30590016651 6714.43610445406 5998.5261152913135 5920.494396847076 0.8585737281576404 0.9802515753905688 0.954145183274311 1.1133462504233145 0.9268276532829602 1.3041989127778597 1.1436944080427707 1.2332257089973393 1.1341005757947837 1.0131799328255073 1.0 12.531501939249043 -5.851990185782604 1.0412203413419185 1.0955054212461661 0.8613306487606939 0.37647726664947234 0.10285828113639266 0.8156559351663195 1.2048434285593659 0.016529022677249997 0.16737017295010184 1.4060792984502544e-06 5.851990185782604 -0.23417477248547225 ASAVSELS(ph)PRERS(ph)PALK ddPTM_A549_MK2206_60min_R1 1 ASAVSELSPRERSPALK 17 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 ASAVS(0.01)ELS(0.99)PRERS(1)PALK 79.635 9.620000000000001e-05 20748000.0 924.41 1585.6 1243.1 1320.1 983.37 665.57 608.14 620.13 1112.7 2045.0 1998.6 True False 1080.427808345382 1666.3002673548228 1419.39027235461 1643.5245592615406 838.717575662362 736.0001756303909 718.6311661083361 708.0353265684754 860.6752266167776 1583.033079685817 1502.2924614461058 0.7191860680079315 1.1091716893465893 0.9448162117436879 1.0940110540656545 0.5582918088099923 0.489918038277259 0.4783563683842107 0.47130325468512374 0.5729079048884345 1.0537449400245211 1.0 10.55294998406889 -6.7575790179396815 24.998746667244664 0.7066447760598481 0.9753959265118218 0.3091260238215804 0.21308255809380677 121.77031899911997 788542.5862013767 0.03491539835960469 0.0705833623025419 1.7475152808974895e-07 6.7575790179396815 0.26875115045197373 ASAVSELS(ph)PRERS(ph)PALK ddPTM_A549_PD325901_60min_R1 2 ASAVSELSPRERSPALK 17 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 AS(0.002)AVS(0.164)ELS(0.835)PRERS(0.998)PALK;ASAVS(0.003)ELS(0.997)PRERS(1)PALK 86.546 5.7414e-06 89890000.0 2521.0 2348.0 2884.0 3317.4 2521.4 3427.5 3162.6000000000004 3613.4 3352.7 2761.3 3246.8 True False 2776.9300641378886 2545.8742003067164 3079.7255829008445 3522.3082636379586 2344.305562357784 3399.5875763840027 3282.9544736411244 3541.327902342537 3211.7976783283098 2586.951046753593 2847.464183160969 0.9752291461855087 0.8940847141685704 1.0815678037720013 1.2369982683075738 0.8232958912077943 1.1939000309426622 1.15293969035871 1.2436777689021923 1.1279501590650016 0.9085104782184897 1.0 11.475461979764559 -5.772552939640008 23.90527945589945 1.0858509018605826 0.9346569459619565 0.17383967144159707 0.12676693477553025 130.3991094612498 280493.1803842294 0.01597864053038058 0.05042322014338993 1.688290047719003e-06 5.772552939640008 -0.15119395589862616 ASAVSELS(ph)PRERS(ph)PALKSPLQSVVVR ddPTM_A549_PD325901_60min_R1 2 ASAVSELSPRERSPALKSPLQSVVVR 26 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 AS(0.004)AVS(0.053)ELS(0.945)PRERS(0.989)PALKS(0.005)PLQS(0.004)VVVR;AS(0.08)AVS(0.476)ELS(0.52)PRERS(0.916)PALKS(0.006)PLQS(0.002)VVVR 48.693000000000005 0.0034573 31874000.0 2164.3999999999996 2736.6 3267.4 3349.2 3190.3 4810.3 3294.5 4433.7 3723.2 3643.0 3562.3999999999996 True False 2384.1282946529327 2967.222886098534 3489.145412472337 3556.0724774149207 2966.224333937511 4771.126511649881 3419.8740003195717 4345.266375329635 3566.7268517767657 3412.980358281731 3124.2473839142035 0.7631048382813992 0.9497400562374988 1.1167954978331365 1.1382173177847736 0.9494204425711277 1.5271282729450155 1.0946233060568313 1.390820201275381 1.141627538888487 1.0924168091983129 1.0 11.609292978031815 -5.4414366124954 1.9579991718674459 1.1226931250713341 0.7202150977751772 0.3540840168382625 0.1605470519110031 0.5010852238663079 2.645948636924568 0.02315688334692018 0.3160735281108681 3.618790049728268e-06 5.4414366124954 -0.4024780272961569 ASDPAS(ph)PHIGR ddPTM_A549_MK2206_60min_R1 3 ASDPASPHIGR 11 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 ASDPAS(1)PHIGR;ASDPAS(1)PHIGR;ASDPAS(1)PHIGR 72.891 0.00053633 9503500.0 1166.0 960.8699999999999 882.31 1057.67 1192.67 881.89 1019.25 1029.5900000000001 1478.68 1244.6 1469.6999999999998 True False 1362.7922940369706 1009.7741787923992 1007.4348251960395 1316.79919748061 1017.2298229203951 975.2110144487962 1204.4345316143008 1175.5375354871348 1143.7613409667454 963.4439955877592 1104.7329283435106 1.2335943458120748 0.9140437049400736 0.9119261310574271 1.1919615716126808 0.9207925253442732 0.8827572614415271 1.0902495080148353 1.0640920582043227 1.035328369076276 0.8721058012024618 1.0 10.10948192167739 -5.245137510383015 24.350090254751404 1.0097680949016397 1.233594591707529 0.32275154895810865 0.09775064943462501 1869.7407895151214 2792767.520371632 0.011369283412393209 0.4095251343642363 5.686728438174413e-06 5.245137510383015 0.2238264968058894 ASDPAS(ph)PHIGR ddPTM_A549_PD325901_60min_R1 3 ASDPASPHIGR 11 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 AS(0.003)DPAS(0.997)PHIGR;ASDPAS(1)PHIGR;AS(0.006)DPAS(0.994)PHIGR 66.00399999999999 0.0016535 6392600.0 987.66 1290.08 902.8199999999999 1011.73 1234.18 1339.36 1311.0700000000002 1192.0500000000002 1084.4099999999999 1230.72 970.9300000000001 True False 1087.9265161231367 1398.7995691361534 964.090794297691 1074.2222642944582 1147.4954544898599 1328.4526962233933 1360.963486295033 1168.2736276048656 1038.8360188373558 1153.0121291640107 851.5117652323771 1.2776412030269977 1.6427248879578566 1.1322107734290567 1.2615471778024154 1.347597885716481 1.5601107940779413 1.5982908773123372 1.3719993960224899 1.2199902118250334 1.354076568571374 1.0 9.733882653354577 -9.335066189605815 1.0680830537429238 1.0515431813834082 1.4020511820890773 0.13531588834135122 0.1753705942517098 0.2735785677277984 0.6542816433537275 0.040244716833549354 0.0322880512411397 4.623105565724225e-10 9.335066189605815 0.3505080007056691 ASDPAS(ph)SLR ddPTM_A549_PD325901_60min_R1 1 ASDPASSLR 9 0 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;Q96D71-2;H0YCR2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 ASDPAS(0.5)S(0.5)LR 45.161 0.04989 1344200.0 628.39 372.31 533.51 702.69 562.22 513.71 677.25 613.87 756.91 463.93 576.21 True False 692.1836902037319 403.6858703220586 569.7171968562517 746.093565375221 522.7316067537059 509.52651608000787 703.0231193554198 601.6258812783009 725.0997049254279 434.63738062521077 505.3398228961385 1.3697390524989261 0.798840408041674 1.1273942227453237 1.4764194935188477 1.0344160168456424 1.0082849065008872 1.3911888347257975 1.1905372464618762 1.4348754483069033 0.8600893120480254 1.0 8.981110064626638 -7.741779740081534 24.998549443418632 1.2218971725582142 1.1310160783500889 0.0 0.22687335488055904 791.8313975178102 1006864.5111481169 0.03464488007007141 0.05134608820717102 1.8122589779059428e-08 7.741779740081534 -0.09088109420812529 ASDPQS(ph)PPQVSR ddPTM_A549_MK2206_60min_R1 4 ASDPQSPPQVSR 12 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 ASDPQS(1)PPQVSR;ASDPQS(1)PPQVSR;ASDPQS(1)PPQVSR;ASDPQS(1)PPQVSR 234.52 5.436699999999999e-42 108655000.0 11748.0 13292.3 11705.5 10915.300000000001 15729.899999999998 12620.0 11631.400000000001 11272.9 18851.100000000002 18148.300000000003 19471.1 True False 13730.775188976264 13968.821293996281 13365.515914284353 13589.548990006448 13416.052547272528 13955.440023521984 13744.674820719732 12870.86809680836 14581.355949020885 14048.586425458248 14635.888494978124 0.9381579528764227 0.9544225004713088 0.9132015400957952 0.9285086446695261 0.9166544656223538 0.9535082224977585 0.9391076479870569 0.8794046293277392 0.9962740529229946 0.9598724689846202 1.0 13.837222709060399 -8.838459225166034 11.155428996968585 0.9983025665087036 0.9291583541915388 0.5369596579376582 0.022924257933254383 0.17280962459808827 24.153774793001805 0.003279323426879999 0.003489289878949802 1.4505769589921731e-09 8.838459225166034 -0.06914421231716483 ASDPQS(ph)PPQVSR ddPTM_A549_PD325901_60min_R1 4 ASDPQSPPQVSR 12 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 ASDPQS(1)PPQVSR;ASDPQS(1)PPQVSR;AS(0.002)DPQS(0.983)PPQVS(0.014)R;ASDPQS(1)PPQVSR 219.84 2.3633999999999998e-32 61179000.0 10591.599999999999 10787.7 10909.9 10294.5 11791.8 12049.0 11423.2 11132.8 11489.7 12240.1 13053.5 True False 11666.851434876186 11696.817338436445 11650.31142055822 10930.367884494182 10963.584647501597 11950.876938833218 11857.916127014883 10910.747570487347 11006.827865508032 11467.257997091472 11448.002252954213 1.0191168010877616 1.0217343672707633 1.0176720062709457 0.9547838690958982 0.9576854026799646 1.0439268507087545 1.0358065857258973 0.9530700055262283 0.9614627620000394 1.001682017850083 1.0 13.482808240647488 -8.26678049381579 24.976390793089127 0.9791384940906115 1.0056915438236889 0.1701977327323384 0.029820048119846385 702.9411965986974 3287123.702026374 0.005313873657033286 0.006521444985726625 5.41027706387283e-09 8.26678049381579 0.026553049733077372 ASDSLSARPS(ph)VRPLLLR ddPTM_A549_MK2206_60min_R1 1 ASDSLSARPSVRPLLLR 17 2 Q8NB49;H7C113 Q8NB49 ATP11C Phospholipid-transporting ATPase IG 1 AS(0.001)DS(0.047)LS(0.368)ARPS(0.584)VRPLLLR 57.00899999999999 0.0017428 1377700.0 237.62 566.78 329.22 238.64 299.73 268.09 270.89 294.92 431.77 520.01 501.26 True False 277.72444674876925 595.6266810868859 375.90834644403895 297.1068107129567 255.6401140499302 296.4591058562605 320.10720654304436 336.72581315462065 333.97478439500856 402.5393798373703 376.7833079277867 0.7370932865263691 1.5808202448316584 0.9976778125109633 0.7885349601790199 0.6784804652198804 0.7868159220924911 0.8495790546124597 0.893685590814858 0.8863842356281273 1.0683577838180665 1.0 8.557591242561882 -5.988868036748518 24.99583053929422 0.8955340890387559 1.1915298553882558 0.21787156609150293 0.20701789326035772 210.3038397613251 472211.07179207273 0.0256145241679297 0.07954174387953983 1.0259636247280134e-06 5.988868036748518 0.2959957663495 ASDSLSARPS(ph)VRPLLLR ddPTM_A549_PD325901_60min_R1 2 ASDSLSARPSVRPLLLR 17 2 Q8NB49;H7C113 Q8NB49 ATP11C Phospholipid-transporting ATPase IG 1 AS(0.002)DS(0.033)LS(0.163)ARPS(0.802)VRPLLLR;ASDS(0.017)LS(0.121)ARPS(0.862)VRPLLLR 53.909 0.0027823 4573100.0 756.51 873.51 546.3199999999999 1054.92 916.06 793.62 762.44 623.56 642.45 938.19 901.4399999999999 True False 833.3103382867731 947.1237532836112 583.3965604890393 1120.0800125028502 851.7191058354374 787.1570218438723 791.4550714231765 611.1226066266433 615.4500606800561 878.9525232874929 790.5685946989722 1.05406456046243 1.1980285577170582 0.7379455298387883 1.4168030706169745 1.077350038373014 0.995684659271851 1.0011213153800296 0.7730165487529173 0.7784903989443236 1.1117979251657157 1.0 9.62674683507648 -7.744177817288005 2.0375947596965576 0.8847018584588621 1.0953150007499388 0.1527168350741266 0.17590829247185688 0.3415564739285119 2.9079550206971585 0.026595569725608545 0.040634576336993196 1.8022796654004164e-08 7.744177817288005 0.21061314229107675 ASDSSS(ph)PSCSSGPR ddPTM_A549_MK2206_60min_R1 1 ASDSSSPSCSSGPR 14 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 AS(0.03)DS(0.01)S(0.09)S(0.837)PS(0.006)CS(0.023)S(0.003)GPR 123.02 1.4007e-06 25515000.0 395.83 350.84 415.97 388.08 492.52 498.35 453.25 263.02 806.58 756.33 649.18 True False 462.63642688563783 368.69625744119963 474.9608008940126 483.159617421573 420.070960437299 551.0850662220428 535.5996580369706 300.3038904649676 623.8909178435885 585.4745277060024 487.97068954347196 0.948082409044822 0.7555704990931704 0.9733387907752595 0.990140653475724 0.8608528533349051 1.1293405075981477 1.09760620773772 0.6154137879591113 1.2785417878833638 1.1998149484219054 1.0 8.93065068321815 -7.383198481970329 0.5736090521812275 1.1085929709719002 0.871651567780022 0.1347062390453495 0.17111027327986875 1.1609416363194462 0.7341720309553085 0.04215618702012211 0.11780012265249817 4.1381051124435153e-08 7.383198481970329 -0.23694140319187829 ASDSSS(ph)PSCSSGPR ddPTM_A549_PD325901_60min_R1 2 ASDSSSPSCSSGPR 14 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 AS(0.005)DS(0.011)S(0.096)S(0.886)PS(0.001)CS(0.003)SGPR;AS(0.007)DS(0.002)S(0.015)S(0.609)PS(0.062)CS(0.277)S(0.028)GPR 123.02 1.4007e-06 94304000.0 1655.69 1452.42 1620.6599999999999 1223.75 1454.76 1288.18 1269.1100000000001 1440.04 1176.88 1532.25 1646.83 True False 1823.7744299454428 1574.820530668433 1730.6477334202787 1299.3382581621004 1352.5826762495483 1277.6894891747181 1317.4066755336387 1411.317272510474 1127.4198263104429 1435.5034735045797 1444.2803501154917 1.2627565207818585 1.0903842391420078 1.1982768672868032 0.8996440739903433 0.9365097822880365 0.8846547618490744 0.9121543995445845 0.9771768150121395 0.7806100984620395 0.9939230104389288 1.0 10.496135096460463 -6.2640220718971396 24.899412690880077 0.9034267291359167 1.174463722520904 0.7249115620479955 0.07071606296619856 92.45743723830526 891376.6535485467 0.011840937823067842 0.028757300892633 5.444749806023755e-07 6.2640220718971396 0.2710369933849873 ASDTCLDVIGGRDT(ph)PGAK ddPTM_A549_MK2206_60min_R1 2 ASDTCLDVIGGRDTPGAK 18 1 Q68DQ2;Q68DQ2-2;Q68DQ2-1 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 ASDT(0.002)CLDVIGGRDT(0.998)PGAK;ASDTCLDVIGGRDT(1)PGAK 81.884 8.546799999999999e-05 12293300.0 4715.4 5068.6 4551.9 4171.0 5967.3 5505.200000000001 4333.6 4071.1 7092.8 6308.8 6929.7 True False 5511.244239538534 5326.5700902589915 5197.427866407328 5192.895187243303 5089.518074834511 6087.756609943996 5120.959024973005 4648.190892220857 5486.292124874165 4883.6376983481105 5208.864240009549 1.0580510425298455 1.0225972198210387 0.9978044400707592 0.9969342543728464 0.9770878718131424 1.1687301356759563 0.9831239189608094 0.8923616892369489 1.053260724810925 0.9375628684726784 1.0 12.346753120902683 -2.6685158217153013 4.059045539136038 1.0189324134538895 1.0370171983649692 0.0 0.0688374898208597 0.0 0.0 0.0080897003547652 0.0 0.0021452809599922283 2.6685158217153013 0.018084784911079677 ASDTCLDVIGGRDT(ph)PGAK ddPTM_A549_PD325901_60min_R1 2 ASDTCLDVIGGRDTPGAK 18 1 Q68DQ2;Q68DQ2-2;Q68DQ2-1 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 ASDT(0.009)CLDVIGGRDT(0.991)PGAK;AS(0.001)DT(0.057)CLDVIGGRDT(0.942)PGAK 68.762 0.00061058 21983000.0 7117.3 8444.4 7622.200000000001 7210.5 6960.0 7737.1 7550.799999999999 7190.700000000001 6518.1 7066.2 8179.799999999999 True False 7839.84305652067 9156.039223624373 8139.488328012074 7655.876208766356 6471.15361069651 7674.091622827331 7838.149825956305 7047.275847504978 6244.166924303325 6620.038926074768 7173.736456024427 1.0928535087090987 1.276327793716931 1.1346232716949922 1.0672090138378354 0.9020617986686847 1.069748194663983 1.0926174768204526 0.9823717236764046 0.8704204514036114 0.9228160201669146 1.0 12.80850903015678 -6.4387746580352 0.6656183443871502 0.9488584048295933 1.2217032271096913 0.49397079711294034 0.0797784321063483 0.6810608732067542 0.44405811664687606 0.015844217117287687 0.10514515261583758 3.641039093719128e-07 6.4387746580352 0.272844822280098 ASDVHEVR ddPTM_A549_MK2206_60min_R1 2 ASDVHEVR 8 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 55.549 0.022179 7425700.0 929.63 1017.98 964.6 747.22 1319.3899999999999 1242.83 994.28 1001.8599999999999 1398.49 1201.89 1330.1799999999998 False True 1086.5288167286344 1069.7908338558666 1101.3947845814957 930.2889335439803 1125.309478785364 1374.3454456762145 1174.9278058312168 1143.876723067572 1081.734247929629 930.382214251143 999.8595948996201 1.0866813923386067 1.0699410590376615 1.1015494477422794 0.9304195691969889 1.1254675001626986 1.3745384378835614 1.1750927948530339 1.1440373517467823 1.0818861502631563 0.9305128630030777 1.0 9.965581708698371 -9.637334322561598 1.0928377305056387 1.016116861650093 1.1242503384367588 0.22975581014037294 0.10313721323087736 0.6089294047183434 1.5019927549441119 0.03070517911923761 0.021188242173407996 2.3049721238711445e-10 9.637334322561598 0.10813347678666574 ASDVHEVRK ddPTM_A549_MK2206_60min_R1 2 ASDVHEVRK 9 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 66.692 0.0016512999999999999 3529400.0 1068.54 1230.31 768.42 794.31 1234.7399999999998 638.8699999999999 678.77 738.73 1261.63 1528.8 1512.1399999999999 False True 1248.8834287052002 1292.9275239211102 877.3935106449433 988.9159856579307 1053.1113816501868 706.474799352416 802.0937228588068 843.4472397657429 975.8728194091185 1183.4430182022875 1136.6339050590984 1.0987560930097942 1.1375056807353334 0.7719226980118316 0.8700391403567297 0.926517656180097 0.6215499961842889 0.7056746409628724 0.7420570827701013 0.858563883292201 1.0411822249317428 1.0 10.150551940471964 -5.749905185382134 24.985857792584728 0.8705545344929291 1.1181310364838908 0.4186084386880423 0.12259509721915184 189.0391626854741 409496.53650074103 0.018540690343485405 0.07058236970148214 1.7786676841158643e-06 5.749905185382134 0.2475765019909617 ASDVHEVRK ddPTM_A549_PD325901_60min_R1 2 ASDVHEVRK 9 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 61.65 0.0023693 4272100.0 1211.21 1327.06 1253.08 1630.4 1664.77 1842.6 1346.7 1545.22 1422.85 1717.83 2059.94 False True 1334.1711475543252 1438.8960035174757 1338.1215441821748 1731.1061050929443 1547.8422983447178 1827.5944765120837 1397.949405442516 1514.3993748983607 1363.0525625941586 1609.3659206332977 1806.5804390355443 0.7385063619235144 0.7964749160494844 0.7406930326869589 0.9582225444758538 0.8567801714774707 1.0116319412202637 0.7738096656182225 0.838268444723576 0.7544931480171644 0.8908354623237641 1.0 10.819045777690988 -10.95958075075643 1.2157292056468758 1.0002874290152313 0.8272352229780692 0.16731531524451593 0.08887710212034777 0.42472661121345456 1.1130795408938936 0.06119150448076022 0.014110238976326746 1.0975372001855871e-11 10.95958075075643 -0.1730522060371621 ASEAAS(ph)PLPDSPGDK ddPTM_A549_MK2206_60min_R1 2 ASEAASPLPDSPGDK 15 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 ASEAAS(1)PLPDSPGDK;ASEAAS(1)PLPDSPGDK 199.37 1.5121e-38 43660000.0 5654.9 5782.0 5009.5 4364.8 6124.3 4842.3 4240.9 5218.5 7437.7 6308.3 6409.2 True False 6609.308870968838 6076.279103081223 5719.922427286958 5434.176195943316 5223.423582811154 5354.708971941404 5011.416634901241 5958.238355985988 5753.07282556629 4883.250648695374 4817.618755078747 1.3719036741961548 1.2612619246127752 1.1872924608774822 1.127979707861813 1.0842334871983397 1.1114845827716142 1.0402269024750437 1.2367600382875454 1.1941735363557742 1.013623305818344 1.0 12.234104514286674 -2.000000115824424 0.5039934217259147 1.0964194221040355 10.55006660445649 0.6217526545756388 0.06734423861283156 57.057816259617155 0.5367574163864737 0.015257119893799595 576.0400484752026 0.00999999733304444 2.000000115824424 9.453647182352453 ASEAAS(ph)PLPDSPGDK ddPTM_A549_PD325901_60min_R1 2 ASEAASPLPDSPGDK 15 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 ASEAAS(1)PLPDSPGDK;ASEAAS(1)PLPDSPGDK 270.07 8.183899999999998e-91 55516000.0 22277.1 23984.8 22617.5 24935.0 28274.0 22123.1 24431.0 21184.6 24358.0 24665.1 28471.0 True False 24538.654792465743 26006.083270662923 24152.459560076244 26475.178318506227 26288.131780004765 21942.93680849043 25360.735074156164 20762.056534002786 23334.317967226718 23107.741376627702 24969.247492539114 0.9827550790146146 1.041524510437634 0.9672882439606189 1.0603114221370544 1.0528203458217849 0.878798482615347 1.0156787897486308 0.8315050960268847 0.9345222748182171 0.9254480489863527 1.0 14.607864722435878 -7.232782581253248 24.97897875552324 0.9551360722407528 1.021290164484655 0.3438920332622307 0.05674821001022186 825.3155207387069 719394.6382041139 0.008447644913838233 0.014630252698225725 5.850829180708689e-08 7.232782581253248 0.06615409224390223 ASEAAS(ph)PLPDSPGDKLVIVK ddPTM_A549_MK2206_60min_R1 2 ASEAASPLPDSPGDKLVIVK 20 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 ASEAAS(1)PLPDSPGDKLVIVK;ASEAAS(1)PLPDSPGDKLVIVK 250.05 7.846999999999999e-98 40970000.0 12408.6 13119.3 14277.900000000001 11824.7 15882.400000000001 11775.900000000001 10236.1 10334.4 16328.1 15037.7 16724.3 True False 14502.868318856896 13787.016332939033 16302.72091517326 14721.752030830954 13546.119999288052 13022.017921790224 12095.866871775468 11799.332847772654 12629.811420617796 11640.673125863768 12571.194742801508 1.1536587106934684 1.0967148799308615 1.2968314665961636 1.171070238909543 1.077552315148471 1.035861601718235 0.962189125158671 0.9386007526873421 1.0046627770085141 0.9259798582413519 1.0 13.617834146858074 -7.023183494999659 2.0830633352885752 0.9948334054381336 1.1825720889130262 0.753005063973098 0.05368699736464858 0.11894840013696585 1.0262842119843782 0.0074925882241146345 0.01512406044449925 9.480178289547044e-08 7.023183494999659 0.18773868347489264 ASEAAS(ph)PLPDSPGDKLVIVK ddPTM_A549_PD325901_60min_R1 2 ASEAASPLPDSPGDKLVIVK 20 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 ASEAAS(0.999)PLPDS(0.001)PGDKLVIVK;ASEAAS(1)PLPDSPGDKLVIVK 259.77 1.2112999999999997e-98 59276000.0 16015.8 16896.6 18341.3 18396.6 18783.7 21742.0 19900.3 19525.6 18201.7 20299.5 21710.5 True False 17641.71222579119 18320.53578062286 19586.0509131967 19532.91620029001 17464.397712247126 21564.940360537126 20657.61680636199 19136.14659046311 17436.745847116774 19017.786105665655 19040.24613419868 0.9265485383670778 0.9622005751132005 1.0286658468147472 1.0258751941870348 0.9172359216974023 1.1325977725573504 1.0849448405637105 1.0050367235585356 0.9157836366305256 0.9988203919017264 1.0 14.216764508105634 -8.5579806262978 19.965565651199807 0.9602403390660632 1.0139557961809644 0.06135528518245892 0.06338399273218807 33.96843872864582 19320.07046999181 0.011333129924923798 0.01285076113829517 2.7670650803188463e-09 8.5579806262978 0.05371545711490122 ASEAASPLPDS(ph)PGDK ddPTM_A549_MK2206_60min_R1 1 ASEAASPLPDSPGDK 15 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 ASEAASPLPDS(1)PGDK 119.45 6.7248e-07 3276100.0 1429.9 1334.0 1072.5 1400.5 2161.8 891.26 1387.8 1544.5 2105.7 1650.1 2342.8 True False 1671.232162301427 1401.894902025311 1224.5966270616364 1743.622562870833 1843.8020837191427 985.5725416294933 1639.9452960258295 1763.4376048328738 1628.7623121119343 1277.341263955778 1761.0181020093742 0.9490147548139916 0.796070693666185 0.6953912771619639 0.9901218851079996 1.0470091599940452 0.5596606534055077 0.9312484034971605 1.0013739227443141 0.9248981088005103 0.7253424950591328 1.0 10.7821940237829 -7.98315689155797 24.998619872944843 0.9663074171150381 0.8388044963258721 0.02049600932607698 0.14797141124227026 314.8382027148122 467282.8683675062 0.019617348477637433 0.027101983629928803 1.0395445561102913e-08 7.98315689155797 -0.12750292078916603 ASEAASPLPDS(ph)PGDKLVIVK ddPTM_A549_MK2206_60min_R1 2 ASEAASPLPDSPGDKLVIVK 20 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 ASEAASPLPDS(1)PGDKLVIVK;ASEAASPLPDS(1)PGDKLVIVK 115.66 1.0719e-14 15071900.0 9658.9 10163.4 9767.8 8683.3 12454.599999999999 10051.1 9198.7 9982.900000000001 15132.6 13105.1 12009.1 True False 11289.086182567482 10680.673648608737 11153.020917307827 10810.708889808153 10622.544838508853 11114.700730619801 10869.984720098582 11398.00664634905 11705.090261796586 10144.648808112765 9026.909035701208 1.2506037379926416 1.1832038637330817 1.2355304427238492 1.1976091535931135 1.1767643604800873 1.2312853366153826 1.2041757236179134 1.2626699351095936 1.2966886245893512 1.1238230902727526 1.0 13.14001635406801 -10.865977937183729 1.0830516908324141 0.9984158162645669 1.2286780273717135 0.6009951161897125 0.04840611231642673 0.1639462065114993 0.33759815543379373 0.028822775795114455 0.006793825062015719 1.3615138476709604e-11 10.865977937183729 0.23026221110714662 ASEAASPLPDS(ph)PGDKLVIVK ddPTM_A549_PD325901_60min_R1 2 ASEAASPLPDSPGDKLVIVK 20 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 ASEAASPLPDS(1)PGDKLVIVK;ASEAASPLPDS(1)PGDKLVIVK 176.48 2.8975999999999994e-35 16866000.0 15828.099999999999 16773.1 17170.6 17131.3 18753.699999999997 18189.9 18141.2 19459.5 18916.2 20358.0 21148.0 True False 17434.957059968638 18186.628002199566 18335.90017120571 18189.461492994804 17436.504808752743 18041.767485242126 18831.573293245554 19071.365006817563 18121.217896857463 19072.592405681997 18546.930068217385 0.9400454412585368 0.9805734930421048 0.9886218422005428 0.9807262671553849 0.9401288916612942 0.9727630081572949 1.0153471881320102 1.0282761048147189 0.9770467581538231 1.028342282821533 1.0 14.178892787857217 -7.552932041887158 20.724366167509455 0.9942195710099336 0.9676550765642944 0.4115183453747716 0.02214873612145026 32.4465560430666 22374.270537183434 0.0032495350705234777 0.0048199961586055115 2.7994193366465646e-08 7.552932041887158 -0.026564494445639242 ASEAASQAS(ph)PSAVTSKPR ddPTM_A549_MK2206_60min_R1 2 ASEAASQASPSAVTSKPR 18 1 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 ASEAASQAS(0.86)PS(0.14)AVTSKPR;ASEAASQAS(0.984)PS(0.016)AVTSKPR 144.5 2.6713999999999998e-17 39014000.0 6064.6 6924.4 7884.0 5835.1 9284.2 7772.900000000001 6504.0 7497.8 10192.7 10644.4 11312.5 True False 7088.156214765533 7276.822383496298 9002.069750819523 7264.69976194759 7918.506478705368 8595.42311876656 7685.69261086035 8560.636111049485 7884.069724397261 8239.822647143134 8503.294040883156 0.8335776912672014 0.8557651127327738 1.05865676378334 0.8543394744459613 0.931228114732223 1.0108345162992662 0.9038488583257448 1.0067435125600306 0.9271783013137362 0.969015373045637 1.0 13.053806111306038 -5.604961058058087 9.808834898999804 0.9615257904525952 0.8391211836422514 0.4141021313500376 0.05426694932857602 0.20008916291792253 21.87910637935954 0.007044927289525827 0.02736862193745684 2.483355770709537e-06 5.604961058058087 -0.12240460681034382 ASEAASQAS(ph)PSAVTSKPR ddPTM_A549_PD325901_60min_R1 3 ASEAASQASPSAVTSKPR 18 1 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 ASEAAS(0.002)QAS(0.852)PS(0.145)AVT(0.001)SKPR;ASEAASQAS(0.757)PS(0.243)AVTSKPR;ASEAASQAS(0.977)PS(0.022)AVTSKPR 115.84 1.4638e-10 66673000.0 13728.1 15980.399999999998 16169.6 15563.7 17630.3 18485.4 14045.699999999999 15825.9 15923.4 15798.1 20012.7 True False 15121.766605906916 17327.124391218666 17266.96629170371 16525.034401272726 16392.00854923315 18334.86103121483 14580.216799601956 15510.240009321633 15254.194873115115 14800.605269879396 17551.26477095773 0.8615770318119221 0.9872293887270193 0.983801823802211 0.9415295488343884 0.9339502744188092 1.044646142057735 0.8307217166325245 0.883710673374753 0.8691222582634842 0.8432785592962007 1.0 14.09928737663441 -7.7530484790444945 24.998455681439278 0.9243456457284208 0.9593051390972528 0.13651294975848205 0.06391350271464132 484.52353823962375 1443505.4716263402 0.010656338407192167 0.015658851838828244 1.7658406939638393e-08 7.7530484790444945 0.03495949336883197 ASEDT(ph)TSGSPPK ddPTM_A549_PD325901_60min_R1 1 ASEDTTSGSPPK 12 0 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDT(0.335)T(0.335)S(0.086)GS(0.244)PPK 184.43 3.4194000000000006e-19 117290000.0 10115.0 10565.0 10147.0 10324.0 12657.0 11345.0 11156.0 11513.0 12622.0 11887.0 12924.0 True False 11141.867353730562 11455.349627870723 10835.636438867847 10961.690032494813 11768.015984279558 11252.610081422765 11580.547684797439 11283.364183226224 12091.541234187356 11136.452791351894 11334.42993198607 0.9830108281218369 1.010668352675013 0.9559930674845311 0.9671143673102276 1.0382538914524406 0.9927812998929565 1.0217141712718008 0.9954946345721599 1.0667974751923517 0.9825331188403681 1.0 13.468424211741638 -7.2800603472495515 0.9633612320436301 1.0291502369708099 0.9821172587016402 0.0667288328812603 0.02938305630512194 0.5326401027823 0.9753865015272586 0.005386409513124945 0.012390689915983072 5.247345408648928e-08 7.2800603472495515 -0.047032978269169634 ASEDTTSGS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 ASEDTTSGSPPK 12 0 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDT(0.003)T(0.003)S(0.007)GS(0.988)PPK;ASEDTT(0.002)S(0.007)GS(0.991)PPK 199.4 1.4237000000000001e-24 145046000.0 11477.7 12423.1 12392.0 11182.5 16207.4 12211.8 11590.8 11121.7 18559.0 19059.1 17291.800000000003 True False 13414.85515717678 13055.382726649656 14149.3719371075 13922.2130020015 13823.312929812959 13504.044570463207 13696.698326254644 12698.23503377778 14355.416132633041 14753.636072880172 12997.768830598307 1.032089070979367 1.004432598917725 1.0886000606348825 1.0711232968866888 1.063514293104769 1.0389509727756556 1.0537730363392042 0.9769549835264505 1.1044523348375508 1.1350898962095974 1.0 13.66597637408857 -11.206131143428276 1.649289183042872 0.9999887461294173 1.056001822687235 0.0 0.053111953179270345 0.46332982043468557 2.268156667125332 0.02769700888829051 0.005762919669170313 6.221123982041525e-12 11.206131143428276 0.05601307655781762 ASEDTTSGS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 ASEDTTSGSPPK 12 0 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDT(0.109)T(0.109)S(0.333)GS(0.449)PPK 205.31 4.1856e-25 109380000.0 9114.1 8756.1 8959.6 8252.3 10216.0 9511.6 9800.6 9199.9 9519.9 10107.0 11079.0 True False 10039.356722554201 9494.00727653562 9567.652334451604 8762.025828666887 9498.463403286714 9434.140683160926 10173.5671960941 9016.400777318064 9119.811709344021 9468.84229512859 9716.353235567447 1.0332432836842917 0.9771163157986154 0.9846958115343613 0.9017813181794202 0.97757493711909 0.9709548896006106 1.0470561278950816 0.9279614026703811 0.9386043804953755 0.9745263542361938 1.0 13.246199224403044 -5.183773966746763 2.319257314814872 0.9692556078417733 1.0573924348820412 0.20261740148709906 0.036344918895436486 1.0587458835878178 5.543522892099054 0.0052813934204049735 0.20280045515488765 6.549769752128874e-06 5.183773966746763 0.08813682704026782 ASEDTTSGS(ph)PPKK ddPTM_A549_MK2206_60min_R1 5 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDTTS(0.043)GS(0.957)PPKK;ASEDT(0.003)T(0.011)S(0.011)GS(0.976)PPKK;ASEDT(0.003)T(0.003)S(0.051)GS(0.943)PPKK;ASEDTT(0.006)S(0.326)GS(0.667)PPKK;ASEDTT(0.003)S(0.012)GS(0.984)PPKK 153.32 1.1625e-13 4182732200.0 31542.100000000002 34863.1 31160.0 32369.9 41606.3 30749.2 28949.0 29906.300000000003 48913.8 46961.6 47280.7 True False 36865.63534969426 36637.48287766015 35578.95654940844 40300.52695314004 35486.06838553234 34003.059934333 34208.65857807448 34145.609609202584 37834.902399288025 36352.94194375231 35539.59730906379 1.0373115662819365 1.0308918966933922 1.0011074756982294 1.1339612714987644 0.9984938230147643 0.9567654815734526 0.962550539911439 0.9607764914233934 1.0645844428191888 1.022885589490939 1.0 15.117139714165674 ASEDTTSGS(ph)PPKK ddPTM_A549_PD325901_60min_R1 8 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDTT(0.059)S(0.043)GS(0.898)PPKK;ASEDT(0.002)T(0.002)S(0.045)GS(0.95)PPKK;ASEDT(0.001)T(0.085)S(0.05)GS(0.864)PPKK;ASEDTTS(0.001)GS(0.999)PPKK;ASEDTTS(0.002)GS(0.998)PPKK;ASEDT(0.003)T(0.041)S(0.112)GS(0.843)PPKK;ASEDTT(0.014)S(0.047)GS(0.939)PPKK;ASEDT(0.001)T(0.067)S(0.219)GS(0.713)PPKK 260.78 6.8249e-70 7186616000.0 82335.6 82336.1 86620.8 84819.0 99403.7 93738.7 89353.0 95470.1 92464.2 97351.6 101577.1 True False 90694.24949973467 89274.85210556808 92499.40838118504 90058.07699207448 92421.92703614842 92975.32310616686 92753.3773108378 93565.87396065542 88578.25122691695 91204.80336187196 89083.76065028955 1.0180783662217328 1.002145076205625 1.0383419795702618 1.0109370814015108 1.0374722212162024 1.0436843082001688 1.0411928799790326 1.0503134721485436 0.9943254593240957 1.0238095326925953 1.0 16.442874841997156 -8.781921556216655 24.998445047427964 0.9973203506373403 1.0300089906984418 0.26953729396045156 0.016095756698625695 138.26055885102014 168745.92428220875 0.0025271689705919425 0.002691902884454328 1.6522602082771463e-09 8.781921556216655 0.032688640061101504 ASEDTTSGSPPKK ddPTM_A549_MK2206_60min_R1 1 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 0 52.071000000000005 0.025095 2749800.0 1470.0 1474.2 1395.0 1392.7 1892.6 1668.2 1273.0 1401.8 2537.5 1912.5 2745.4 False True 1718.1000619505546 1549.2304831826943 1592.8319764577927 1733.9115625206782 1614.201047112059 1844.7278167384611 1504.2876220210987 1600.5094428324533 1962.7603015548445 1480.4649217110639 2063.6414108146387 0.832557465142319 0.7507265918700107 0.7718550171122074 0.8402194070316718 0.7822100480503735 0.8939187821445395 0.728948166158029 0.7755753661682141 0.9511150005368566 0.7174041545942028 1.0 11.010976586923135 -8.831238076170237 4.631982292484906 0.9787374409395674 0.7964555242382632 0.0 0.09029275538131275 0.06750070832289272 2.7282085738974473 0.007807660251093822 0.008312148249286446 1.474897786460073e-09 8.831238076170237 -0.18228191670130423 ASEDTTSGSPPKK ddPTM_A549_PD325901_60min_R1 2 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 0 ; 86.288 0.00023687 15386200.0 5027.799999999999 4517.700000000001 4984.3 4788.3 5097.9 4837.5 4237.1 4936.2 4921.4 5148.1 5833.1 False True 5538.218554729268 4898.42243386953 5322.564571030749 5084.062415981684 4739.841090800251 4798.105003868014 4398.345159130087 4837.743618626012 4714.570672629505 4823.048087419756 5115.665679067465 1.0825997831310255 0.957533728975515 1.0404441777362197 0.9938222579291887 0.9265345681589334 0.9379238802686303 0.8597796328105362 0.945672356663441 0.9215947578280612 0.9427997038889666 1.0 12.320706268406349 -6.574647069149951 5.0630085695087 0.9489932266552662 1.0197180766774934 0.46194826339530093 0.042921813463447624 0.18581981915533796 10.286987728704146 0.006943475874225153 0.014883908778212256 2.662888185653429e-07 6.574647069149951 0.07072485002222717 ASEENLLSSSSVPSADRDSS(ph)PTTNSK ddPTM_A549_MK2206_60min_R1 2 ASEENLLSSSSVPSADRDSSPTTNSK 26 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 ASEENLLSSSSVPSADRDS(0.028)S(0.965)PT(0.006)T(0.001)NSK;ASEENLLSSSSVPSADRDS(0.161)S(0.811)PT(0.025)T(0.003)NSK 246.55 1.5280999999999998e-112 188073000.0 8872.599999999999 9411.900000000001 8379.4 7870.7 11449.3 9005.5 9343.7 8722.8 13250.6 13462.7 12858.3 True False 10370.077965756793 9890.925508524762 9567.724920093495 9799.021853329145 9765.123136796004 9958.456032632903 11041.329343188181 9959.283612454643 10249.36025686014 10421.466719748785 9665.22923897351 1.0729262296170992 1.0233513622875252 0.989911846220176 1.0138426736756678 1.0103353883650983 1.0303383175307423 1.1423763544754597 1.0304239419687435 1.0604363335254599 1.0782430982315314 1.0 13.238588235206018 -5.2535010099394865 22.362498616597634 1.031669096404366 1.0729263227533243 0.03690783509350637 0.041390384649459405 489.3267413525494 1378285.1899787104 0.005670811755623182 0.0794858264405011 5.578263049304589e-06 5.2535010099394865 0.04125722634895834 ASEENLLSSSSVPSADRDSS(ph)PTTNSK ddPTM_A549_PD325901_60min_R1 2 ASEENLLSSSSVPSADRDSSPTTNSK 26 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 ASEENLLSSSSVPSADRDS(0.286)S(0.712)PT(0.001)TNSK;ASEENLLSSSSVPSADRDS(0.017)S(0.972)PT(0.01)T(0.001)NSK 355.39 3.3263999999999984e-258 332610000.0 19137.3 17472.3 17250.4 17945.8 21837.4 19918.5 19714.7 18881.4 20461.3 22352.6 20762.4 True False 21080.10460786436 18944.75204004218 18421.115879082085 19054.271308131105 20303.616358940224 19756.290339957628 20464.953696797777 18504.795664828238 19601.382717087436 20941.253021281413 18208.756423697578 1.1576905153407346 1.0404198726820657 1.0116624908611624 1.046434521103986 1.1150468426562241 1.084988446231618 1.123907268602039 1.016258070251595 1.0764811314394562 1.1500649761027975 1.0 14.152344775635337 -10.793016795217724 0.5851009307964627 0.9870515849710896 1.0743880751388963 0.0 0.06207593350506576 1.3305684066126007 0.6166735484734824 0.06326025089069955 0.00923312379810602 1.6105833488214623e-11 10.793016795217724 0.08733649016780676 ASEIQPLQGTNENRENS(ph)PAGR ddPTM_A549_MK2206_60min_R1 2 ASEIQPLQGTNENRENSPAGR 21 1 Q6ZSS7;H7C284 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 ASEIQPLQGTNENRENS(1)PAGR;ASEIQPLQGTNENRENS(1)PAGR 184.4 6.1339e-45 44373000.0 6301.3 7958.0 6800.9 5585.6 8193.7 6368.1 5699.0 6285.6 9690.3 10432.0 9983.900000000001 True False 7364.805388006139 8363.028208633754 7765.369884366877 6954.072250747113 6988.417584128761 7041.968115197335 6734.43453094913 7176.603048842676 7495.462522229323 8075.403954661341 7504.622088377754 0.981369255010436 1.1143836571844696 1.034744960228302 0.9266385660534104 0.9312151234039582 0.93835079665145 0.8973715733639144 0.9562910649367575 0.9987794766957532 1.0760573763157968 1.0 12.873563708280106 -6.052284063285625 9.290679707741946 0.9760388877067342 1.054505478484151 0.2762487025581184 0.054337647310739076 0.41136469243621926 71.31485070108643 0.007022176262148115 0.018715411451523396 8.86575930864298e-07 6.052284063285625 0.0784665907774168 ASEKPVS(ph)PK ddPTM_A549_MK2206_60min_R1 4 ASEKPVSPK 9 1 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E7EUY6;E7EU80;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 AS(0.003)EKPVS(0.997)PK;AS(0.029)EKPVS(0.971)PK;AS(0.006)EKPVS(0.994)PK;ASEKPVS(1)PK 106.49 0.00043587 513570500.0 26097.4 26411.7 24550.8 22675.899999999998 32331.499999999996 24268.7 23262.0 23220.600000000002 32033.199999999997 35279.0 33358.8 True False 30502.003099828828 27755.94271650819 28032.47260761288 28231.496517959844 27575.579179279066 26836.79772574072 27488.40429179484 26512.191160105038 24777.731346508997 27309.449397670403 25074.889303956963 1.2164362015753918 1.1069218444018472 1.117950004396996 1.1258871844153964 1.0997288500463083 1.0702658504460763 1.0962522688966372 1.0573203669505835 0.9881491816834832 1.0891154519817088 1.0 14.61395571145431 -7.696023361422164 0.5073765117013722 0.9887396307764337 1.157145123837727 0.49989671539767366 0.0417629109165639 0.2832513091677536 0.14911070682637223 0.008285559641851866 0.018524586824443752 2.013615931200669e-08 7.696023361422164 0.16840549306129338 ASEKPVS(ph)PK ddPTM_A549_PD325901_60min_R1 4 ASEKPVSPK 9 1 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E7EUY6;E7EU80;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 AS(0.109)EKPVS(0.891)PK;AS(0.001)EKPVS(0.999)PK;ASEKPVS(1)PK;AS(0.096)EKPVS(0.904)PK 113.22 0.00020471 729392400.0 28157.600000000002 29035.8 30453.4 29318.0 33656.7 29624.0 31796.9 31829.0 34092.9 34717.2 37823.3 True False 31016.13882347047 31482.74876714896 32520.150855170814 31128.906273990993 31292.769501311657 29382.751965805895 33006.94842943132 31194.14562563255 32660.09397425337 32525.15006712559 33171.27388165343 0.9350300785591795 0.9490967660594316 0.9803708766565414 0.938429629957864 0.9433695435682152 0.8857890737219195 0.995046151896114 0.9403963723830816 0.9845896811432742 0.9805215857300794 1.0 15.017646796784053 -8.814325294752612 1.1523594246963906 0.9955983366314529 0.9441400106458381 0.32219834912597267 0.026708408179466105 0.2972883094895825 0.786223650914711 0.0054254302249047695 0.005616072630672422 1.5334679561294564e-09 8.814325294752612 -0.05145832598561484 ASELS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 ASELSPGR 8 0 Q5T196;Q8NFF5-3;Q8NFF5-2;Q8NFF5 Q5T196 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region 1 ASELS(1)PGR;ASELS(1)PGR 108.43 0.0017507000000000002 37017000.0 5639.5 5726.799999999999 5156.4 5489.3 7045.4 5186.2 5072.6 4813.0 7598.299999999999 7792.0 7458.700000000001 True False 6591.309727462683 6018.2696588594845 5887.655056205705 6834.17874642404 6009.030992984945 5735.000241679059 5994.225759202064 5495.257489194321 5877.297181991786 6031.78178822097 5606.498940352282 1.1756552168452779 1.0734452503938812 1.0501482509574427 1.21897441150584 1.0717974010010907 1.0229200616452276 1.0691566738841511 0.9801584817296031 1.0483007746047104 1.0758553336749521 1.0 12.452884424812282 -6.998562082116454 24.99989011705285 1.024603041290116 1.123064673041083 0.44370962801351754 0.05000018372272853 31.059795130631592 539989.5863047783 0.006692069509323136 0.012584095339843983 1.0033164154608648e-07 6.998562082116454 0.098461631750967 ASELS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 ASELSPGR 8 0 Q5T196;Q8NFF5-3;Q8NFF5-2;Q8NFF5 Q5T196 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region 1 ASELS(1)PGR;ASELS(1)PGR 112.8 0.0014103 41380000.0 6671.9 6938.9 6425.0 6689.700000000001 7698.3 7692.9 6186.1 6844.5 7394.6 8355.6 8041.700000000001 True False 7349.226376406818 7523.66545507167 6861.039136663635 7102.907575588978 7157.59796569324 7630.251572972862 6421.515420663811 6707.981078093625 7083.830677414186 7828.025990024384 7052.621880536401 1.0420559191878664 1.066789852414354 0.9728352452296515 1.0071300710437 1.0148846892595433 1.0819028302127731 0.9105146326340993 0.9511329533497458 1.0044251340007202 1.1099455099993265 1.0 12.783943977755964 -7.729056510374709 24.999998577485105 0.9912664426397054 1.0281106625028655 0.0984922768050821 0.05284656894007004 278.7609076802228 215206.69191158973 0.006189607831635991 0.009180282916365622 1.8661368534086688e-08 7.729056510374709 0.03684421986316011 ASENS(ph)ESEYSR ddPTM_A549_MK2206_60min_R1 1 ASENSESEYSR 11 0 Q8IXW5-2;Q8IXW5 Q8IXW5-2 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 1 ASENS(0.999)ES(0.001)EYSR 97.86 0.00027785 2904200.0 429.87 432.45 316.11 229.04 528.1 311.63 219.03 401.29 643.88 319.52 392.64 True False 502.4215466875409 454.4598578567059 360.9391513104464 285.1548102819962 450.4171895698398 344.60647975674766 258.82491582975746 458.17408639908314 498.0422080650769 247.3402100837225 295.13665168728056 1.7023353209952867 1.5398286023053493 1.2229560417080578 0.9661789162809205 1.5261309871031898 1.1676166880211276 0.8769663623615338 1.5524133779377323 1.6874969788326732 0.8380531820419174 1.0 8.205239283448925 -5.591149289858507 3.9960582206822752 1.29040935136992 1.6730627577046062 0.2082035203829602 0.2810358194330048 0.28585700660612007 8.758713058573932 0.041756683404322974 0.19628906549820657 2.5636026399553586e-06 5.591149289858507 0.38265340633468625 ASENS(ph)ESEYSR ddPTM_A549_PD325901_60min_R1 2 ASENSESEYSR 11 0 Q8IXW5-2;Q8IXW5 Q8IXW5-2 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 1 AS(0.011)ENS(0.988)ES(0.002)EYSR;AS(0.002)ENS(0.994)ES(0.004)EYSR 82.54299999999999 0.00068713 6512000.0 753.53 673.4 645.83 865.55 725.78 804.03 815.99 797.91 901.52 908.2 931.4100000000001 True False 830.0278108805333 730.1497812975056 689.6599074912803 919.0130576933249 674.8037166050734 797.4822462552972 847.0429459768608 781.9950591017142 863.6322495202489 850.8560970056182 816.8524746944559 1.0161293949571564 0.8938575861823991 0.8442894266180047 1.1250661363755827 0.8261023104049285 0.9762867481715054 1.0369595149891633 0.9573271592207883 1.0572683272377807 1.0416276174273469 1.0 9.673931737858416 -7.5298854109254325 12.426643722763634 1.0214046978189333 0.9391008490466569 0.17465975091819486 0.08023972820053588 0.49324964761023704 859.7818452479224 0.01140285670697428 0.017072590764519068 2.9519880091889695e-08 7.5298854109254325 -0.08230384877227637 ASEPLLS(ph)PPPFGESR ddPTM_A549_MK2206_60min_R1 2 ASEPLLSPPPFGESR 15 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR 258.68 3.829999999999999e-77 46372000.0 9414.5 9269.8 8796.0 7009.400000000001 12174.2 8918.099999999999 8007.8 8227.5 11802.6 11605.599999999999 12371.2 True False 11003.437437573799 9741.593225482928 10043.40506446075 8726.703314663919 10383.39130706522 9861.807422644331 9462.713605357869 9393.773320662009 9129.329944879291 8983.886899560739 9299.089612249607 1.183281148627611 1.0475856918993893 1.0800417549725152 0.9384470607927373 1.1166029944896187 1.0605132151488745 1.0175957002170106 1.010182040647041 0.9817444852723333 0.9661039170680048 1.0 13.182873766884619 -2.0000000000000004 0.3898114569993211 0.9964123156645169 3.385665572294188 0.4868464083513141 0.04854036841032104 36.19773050963126 0.4268950265068167 0.010587905077186733 66.74200489476569 0.00999999999999999 2.0000000000000004 2.389253256629671 ASEPLLS(ph)PPPFGESR ddPTM_A549_PD325901_60min_R1 2 ASEPLLSPPPFGESR 15 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR 189.1 1.4307e-33 52613000.0 6946.799999999999 7905.9 8497.7 7643.1 8889.7 8138.5 7606.5 10615.0 10313.3 9869.1 10363.6 True False 7652.034022036127 8572.157938758464 9074.405022821256 8115.196928260471 8265.31813980011 8072.222754311073 7895.969519936511 10403.275497693592 9879.867866466837 9245.963341728853 9088.942900273203 0.841905830633628 0.9431413567908755 0.9984004875361787 0.8928647717675219 0.9093816773292376 0.888136590017353 0.8687445401047867 1.1446078616448214 1.0870205671739734 1.01727598502692 1.0 13.149896794569063 -8.247493760987593 24.997373423454885 1.050004846163769 0.9099865609849712 0.6722436515771231 0.052148968360984184 427.9271498839888 767055.1696094718 0.009235216092323497 0.011890054951355769 5.655958823003347e-09 8.247493760987593 -0.14001828517879777 ASEQETAKEEDGS(ph)VELESQVQK ddPTM_A549_MK2206_60min_R1 2 ASEQETAKEEDGSVELESQVQK 22 1 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 ASEQET(0.001)AKEEDGS(0.999)VELESQVQK;ASEQET(0.001)AKEEDGS(0.999)VELESQVQK 193.08 7.7435e-51 21463000.0 3582.2 4482.2 3425.6 3068.3999999999996 4889.0 3939.3 3686.8 3458.9 5640.8 4855.1 6000.5 True False 4186.787783618555 4710.3248349759 3911.4015903611535 3820.1581377457082 4169.834576419136 4356.154111304293 4356.643837287815 3949.2096674369895 4363.167806506625 3758.329537986606 4510.410244624918 0.9282498833909786 1.0443229284052866 0.8671941970295037 0.8469646729581223 0.9244911993068374 0.965799977174038 0.965908553990106 0.875576600186931 0.9673549787862951 0.8332566959880043 1.0 12.13904294452165 -8.968362934330269 7.3927644680784645 0.9857853433172974 0.928487108104913 0.0 0.0693516517702065 0.22936860313724577 37.8065239003612 0.009422098823100567 0.009814289693165272 1.0755660012350479e-09 8.968362934330269 -0.05729823521238442 ASEQETAKEEDGS(ph)VELESQVQK ddPTM_A549_PD325901_60min_R1 2 ASEQETAKEEDGSVELESQVQK 22 1 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 ASEQET(0.003)AKEEDGS(0.997)VELESQVQK;ASEQET(0.02)AKEEDGS(0.98)VELESQVQK 182.97 7.059400000000001e-50 47006000.0 7172.5 7498.1 6836.7 9195.0 8419.2 9619.4 8023.0 8939.5 8104.0 8906.2 10049.8 True False 7900.646919884575 8129.991201584242 7300.679574416853 9762.954266639847 7827.864436663225 9541.062795701902 8328.319655354053 8761.194659597912 7763.417062419131 8343.861012058394 8813.738310931107 0.8964013499341041 0.9224225765247809 0.8283295143176982 1.1076973155115677 0.8881435051180081 1.0825216791232322 0.944924771027633 0.9940384375528794 0.880831355384204 0.9466880814591517 1.0 13.105538346795177 ASES(ph)PAR ddPTM_A549_PD325901_60min_R1 1 ASESPAR 7 0 O43237;O43237-2;J3KRZ2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 AS(0.138)ES(0.862)PAR 57.047 0.036123 35785000.0 488.16 552.62 360.36 399.94 523.77 369.33 299.83 399.53 456.94 371.9 649.05 True False 537.7176438356014 599.1912268200588 384.81619662071734 424.64338547035806 486.982202108407 366.32229893097116 311.2401947232714 391.5610607247785 437.7364008516534 348.41817053114875 569.2209646669422 0.9446553750005083 1.0526513674187186 0.6760400977955507 0.7460079860530467 0.8555240097197508 0.6435502584577337 0.5467827329679988 0.6878893874787015 0.7690096254760715 0.6120965181509298 1.0 9.15284498773196 -10.450065287852476 0.9387230222631975 0.9908504400528871 0.7665149483678569 0.0 0.17553109912057188 0.5727421315059853 0.9552981746642362 0.07840894253538289 0.02686364731935019 3.547600538492725e-11 10.450065287852476 -0.2243354916850302 ASES(ph)PARGPS(ph)GSPR ddPTM_A549_MK2206_60min_R1 1 ASESPARGPSGSPR 14 1 O43237;O43237-2;J3KRZ2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 2 AS(0.118)ES(0.882)PARGPS(0.62)GS(0.38)PR 90.42200000000001 2.0064e-05 24487000.0 1571.7 1520.6 1329.9 1396.4 1461.8 1216.2 1130.3 1190.9 2159.6 1954.5 2302.4 True False 1836.9645356242754 1597.9920449922704 1518.4998175564283 1738.5180626867782 1246.77115643475 1344.8974767517777 1335.6608791598176 1359.7137219782912 1670.4540481725476 1512.9770925407968 1730.650536992653 1.0614300786664672 0.9233476145733598 0.8774156221019187 1.0045459932701355 0.720406072621259 0.7771051682616426 0.771768101422019 0.7856662526110338 0.9652174211180099 0.8742244954720282 1.0 10.757098721413682 -8.90063367899788 7.069514957975499 0.9847802068198674 0.8614580393478778 0.07994378041721883 0.1035034176592292 0.24238447822699788 15.054790924329543 0.017792653684354683 0.01887083049991878 1.2570898534167491e-09 8.90063367899788 -0.12332216747198965 ASES(ph)PARGPS(ph)GSPR ddPTM_A549_PD325901_60min_R1 2 ASESPARGPSGSPR 14 1 O43237;O43237-2;J3KRZ2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 2 AS(0.09)ES(0.894)PARGPS(0.526)GS(0.489)PR;AS(0.128)ES(0.872)PARGPS(0.666)GS(0.334)PR 69.188 0.00085401 54932000.0 1462.51 1478.12 1640.7 1670.69 1415.5 1737.7 1624.85 1665.26 1857.04 2260.59 2075.1 True False 1610.982938557043 1602.6863598625914 1752.0477683305885 1773.8847268877144 1316.0801632099012 1723.548747332599 1686.6845559020367 1632.0450829288022 1778.9950668305569 2117.855961605298 1819.8758551427036 0.8852158426107146 0.8806569719212625 0.9627292781425487 0.9747284254994509 0.7231702972984947 0.9470694072137403 0.9268129752563683 0.8967892388466394 0.9775364961315226 1.1637365019270662 1.0 10.829624323394468 -8.817490344085472 3.616136318635686 0.9905856626419992 0.8998273930677336 0.3373427205861783 0.08229379865754606 0.21127151488100118 5.431543435101138 0.011077053581748908 0.011843418605695101 1.5223329793931756e-09 8.817490344085472 -0.09075826957426558 ASES(ph)PARGPSGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 ASESPARGPSGSPR 14 1 O43237;O43237-2;J3KRZ2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 2 AS(0.133)ES(0.867)PARGPS(0.07)GS(0.93)PR 72.421 0.00041577 23071000.0 1467.5 1677.9 1201.2 949.72 2048.6 1590.8 1327.8 1157.5 2160.5 2161.7 2843.0 True False 1715.178123069685 1763.2979431096473 1371.5482223090319 1182.4014426345507 1747.2536537640108 1759.1374001124227 1569.0440726784097 1321.5791696950814 1671.1501996095517 1673.3704686341468 2137.0046371916733 0.8026085171830379 0.8251259320741908 0.6418087253715277 0.5532984917563837 0.817618091863455 0.8231790280175425 0.7342258623923044 0.6184259718929874 0.7820058836211417 0.7830448467501655 1.0 11.061374323238272 -10.17999321118414 0.6831399767579446 1.000053415417596 0.7267169862827948 0.14887568835311893 0.10749658506523659 0.42159077251115057 0.3737518479415005 0.058870180579781856 0.0200275553997418 6.607037759334675e-11 10.17999321118414 -0.27333642913480116 ASES(ph)PARGPSGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ASESPARGPSGSPR 14 1 O43237;O43237-2;J3KRZ2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 2 AS(0.383)ES(0.617)PARGPS(0.077)GS(0.923)PR 70.414 0.00068791 26311000.0 1792.3 1911.2 1873.5 1430.1 1824.9 1699.2 1530.4 1447.2 2072.4 2051.8 2244.4 True False 1974.252976578477 2072.263531356983 2000.6469762707118 1518.4340290072478 1696.725319563228 1685.3622785679643 1588.6402094670134 1418.3344606935627 1985.3042349651312 1922.248997837622 1968.3530284238277 1.0029974034481883 1.0527905824984873 1.0164065832604956 0.7714236252747528 0.8620025447985276 0.8562296774159104 0.8070910992725365 0.7205691459876503 1.0086118731226164 0.9765773568458277 1.0 10.942773279058994 ASES(ph)PARGPSGSPR ddPTM_A549_MK2206_60min_R1 3 ASESPARGPSGSPR 14 1 O43237;O43237-2;J3KRZ2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 AS(0.199)ES(0.8)PARGPS(0.001)GS(0.001)PR;AS(0.199)ES(0.801)PARGPSGSPR;AS(0.03)ES(0.872)PARGPS(0.049)GS(0.049)PR 54.368 0.005043 66442000.0 1172.5 1658.71 1504.73 1246.81 1980.64 1106.4099999999999 1266.0 1379.0299999999997 2427.61 1866.22 2626.48 True False 1370.3893351272282 1743.1312540767642 1718.1233404554362 1552.2785059714276 1689.2904797379435 1223.489571824482 1496.0158126305676 1574.5117256022527 1877.760211096573 1444.6396058539192 1974.2525288396723 0.6941307229489265 0.8829322635343184 0.8702652347444271 0.786261374011636 0.8556607906339067 0.6197229351118337 0.7577631487243535 0.7975229625399749 0.9511246325717962 0.731740030594251 1.0 10.947090822988951 -8.795268417335649 3.3761334256730464 0.9794833977294681 0.7841343656157912 0.04837113711020402 0.10445933743832321 0.12188182820036855 2.7825631552630297 0.01330012989797004 0.014317994359378064 1.6022548050040455e-09 8.795268417335649 -0.19534903211367693 ASES(ph)PARGPSGSPR ddPTM_A549_PD325901_60min_R1 4 ASESPARGPSGSPR 14 1 O43237;O43237-2;J3KRZ2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 AS(0.048)ES(0.952)PARGPSGSPR;AS(0.003)ES(0.995)PARGPS(0.001)GS(0.001)PR;AS(0.063)ES(0.935)PARGPS(0.001)GSPR;AS(0.006)ES(0.994)PARGPSGSPR 77.77600000000001 0.0005788 102538900.0 2219.13 2390.4100000000003 2706.8999999999996 2353.63 2619.0400000000004 3246.8799999999997 2646.56 2892.4700000000003 2713.53 2797.47 3074.0199999999995 True False 2444.4144439628376 2591.858239844625 2890.606511912029 2499.0083796184385 2435.087665597498 3220.438485779632 2747.276289053201 2834.77741675118 2599.4897706547617 2620.837266780783 2695.935027818308 0.906703766500258 0.961394919796006 1.0722092639789096 0.926954230659174 0.9032441956021836 1.1945534490071819 1.0190439534725884 1.0515006435615888 0.9642256745179817 0.97214407607653 1.0 11.39657001257139 -5.521733683178865 24.988457211578186 0.9997980652336877 0.9203765269445642 0.13561335244783057 0.07571633621139351 56.095530367222864 1224097.1313978625 0.010058724518617482 0.04005458952378243 3.0079202454591373e-06 5.521733683178865 -0.07942153828912357 ASES(ph)PVHR ddPTM_A549_MK2206_60min_R1 2 ASESPVHR 8 0 Q8IY26 Q8IY26 PPAPDC2 Presqualene diphosphate phosphatase 1 AS(0.022)ES(0.978)PVHR;AS(0.068)ES(0.932)PVHR 71.61399999999999 0.0060434 18476900.0 2088.37 2135.8 1771.33 1770.3000000000002 2478.3999999999996 1305.8000000000002 1498.17 1872.26 2654.8 2848.2 3263.8 True False 2440.8358002555633 2244.503097260615 2022.5312292895924 2204.023579471788 2113.830643116626 1443.978889280111 1770.3680963734107 2137.658588555778 2053.4920388444525 2204.78964183919 2453.3083837024915 0.9949160148272495 0.9148882839886802 0.8244097002747052 0.8983883127426128 0.8616245137215358 0.5885843373269212 0.7216247692846511 0.8713370902559179 0.8370297238153799 0.8987005696005322 1.0 11.260512878392356 -10.426142368155045 0.8177334883646863 0.9977322059437301 0.83013792059634 0.1285191127642753 0.10467981771454893 0.6871099097942175 0.8450035655273541 0.06700103075133641 0.020779217505682977 3.748501006944994e-11 10.426142368155045 -0.16759428534739018 ASES(ph)PVHR ddPTM_A549_PD325901_60min_R1 4 ASESPVHR 8 0 Q8IY26 Q8IY26 PPAPDC2 Presqualene diphosphate phosphatase 1 ASES(1)PVHR;AS(0.049)ES(0.951)PVHR;AS(0.316)ES(0.684)PVHR;ASES(1)PVHR 127.94 0.00032710000000000004 71587400.0 6015.35 6523.83 6306.99 6333.0 6398.05 6073.49 5816.880000000001 6240.9 6396.6 7015.43 7110.5 True False 6626.023903733384 7073.6160494833775 6735.020268411859 6724.175026713452 5948.673040074254 6024.029511099192 6038.244551518871 6116.420353608664 6127.773146775697 6572.474552539228 6235.953577173236 1.0625518329687385 1.13432788777909 1.0800305334320417 1.0782913861526093 0.9539315786200565 0.9660157723351575 0.9682953018800395 0.9808316046479043 0.9826521430830507 1.0539646376775205 1.0 12.606394472763332 -6.679919872462833 5.889116382084655 0.9848782261927304 1.0932765217537754 0.7368794289371925 0.029412613767990432 0.05733809609398774 3.212986815685969 0.0030949773433113946 0.006482796728746229 2.0896816425400759e-07 6.679919872462833 0.10839829556104508 ASES(ph)SSEEKDDYEIFVK ddPTM_A549_PD325901_60min_R1 1 ASESSSEEKDDYEIFVK 17 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 AS(0.182)ES(0.735)S(0.039)S(0.044)EEKDDYEIFVK 58.093 0.001872 52542000.0 2887.4 3669.5 3834.5 3816.0 4044.7 3420.0 3770.4 4020.5 3381.3 3949.5 4333.3 True False 3180.5267224084632 3978.74164311137 4094.7322287216703 4051.7056532351994 3760.6142254574943 3392.1486538973877 3913.8846352420455 3940.307973478767 3239.195719787491 3700.1278959741117 3800.331571051937 0.8369076915907337 1.0469459226711761 1.0774670978480552 1.0661453027146475 0.989548978858324 0.8925928147260151 1.0298797781370106 1.0368326815199667 0.8523455543882654 0.9736329124960829 1.0 11.891909580861453 -8.737600536945527 24.998697801493645 0.9302742618755048 1.0010513540720953 0.08429279328105244 0.07742887738066939 361.0004129023221 378564.3983393318 0.014417191373494866 0.016343186562289377 1.829782472019098e-09 8.737600536945527 0.07077709219659056 ASESSKPWPDATYGT(ph)GSASR ddPTM_A549_MK2206_60min_R1 1 ASESSKPWPDATYGTGSASR 20 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASESSKPWPDAT(0.004)YGT(0.44)GS(0.36)AS(0.196)R 66.88600000000001 0.00057088 12826000.0 1892.7 2076.2 1741.5 1654.4 2715.2 2200.5 2035.3 1957.5 2607.1 3001.9 3199.9 True False 2212.1414879277654 2181.8697118327973 1988.470886739243 2059.728074268838 2315.7976768036906 2433.3554494263167 2405.0876646500724 2234.9816195923286 2016.5960126832044 2323.7687050899053 2405.2765172527747 0.9197036066582475 0.9071180366093021 0.8267119694871536 0.8563373314854417 0.9627989381647962 1.0116738894560084 0.9999214840367219 0.9291994511072053 0.8384050641239752 0.9661129140129116 1.0 11.231987044410987 -6.7581400617113 24.998953146685878 0.9373628325282549 0.8759601991664748 0.30846380489959246 0.052558818790727165 134.72809849963434 1020817.8956466039 0.010224605141795155 0.02061606933092944 1.7452592090586964e-07 6.7581400617113 -0.06140263336178009 ASESSKPWPDATYGTGS(ph)ASR ddPTM_A549_PD325901_60min_R1 2 ASESSKPWPDATYGTGSASR 20 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASESSKPWPDATYGT(0.033)GS(0.725)AS(0.242)R;ASESSKPWPDATYGT(0.024)GS(0.816)AS(0.16)R 130.15 2.6296999999999998e-17 21345000.0 7958.200000000001 6236.6 6528.4 6930.7 6653.9 7371.700000000001 6308.9 5919.6 9668.0 8349.1 10153.099999999999 True False 8766.110605482809 6762.180169349602 6971.456482458347 7358.793598238259 6186.553018708841 7311.667319279344 6548.988641862542 5801.528934163635 9261.687581375638 7821.936401133682 8904.333065803758 0.9844769440563966 0.7594257895988988 0.7829285395030382 0.8264283853553281 0.6947800551697362 0.8211358745506843 0.7354833420386429 0.6515399739980363 1.0401326537238669 0.8784415793219914 1.0 13.12029184223375 -8.778140265498656 24.99321334400578 1.01895156195601 0.7796259559794673 0.4414740013513119 0.09165188482155177 100.63305537923615 150598.82305833438 0.013442959341555443 0.014329771707667919 1.666708823253844e-09 8.778140265498656 -0.23932560597654284 ASESSS(ph)EEKDDYEIFVK ddPTM_A549_PD325901_60min_R1 1 ASESSSEEKDDYEIFVK 17 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 AS(0.26)ES(0.196)S(0.256)S(0.288)EEKDDYEIFVK 52.541000000000004 0.004399800000000001 53542000.0 4490.0 3595.3 3566.7 3864.1 4581.4 3773.0 4632.7 3764.3 4268.4 4792.6 4674.4 True False 4945.821494636702 3898.288548706446 3808.757710309445 4102.776680992173 4259.61826897198 3742.2739389341627 4808.999933610712 3689.2180834637793 4089.013991760838 4489.9944180897655 4099.478433462991 1.20645139983302 0.9509230532561694 0.929083485162291 1.0008045529651428 1.0390634657818438 0.9128658681033519 1.1730760416632708 0.8999237691677161 0.9974473724226148 1.0952599192714596 1.0 12.001224655533951 -5.254145091584289 24.593054694710776 0.9941576652542512 1.2064515262420248 0.36855608276385166 0.0774193931727466 451.85259305164453 1523395.7525905906 0.00849342336161052 0.11985044701691494 5.5699963222152286e-06 5.254145091584289 0.21229386098777359 ASET(ph)PPPVAQPKPEAPHPGLETTLQER ddPTM_A549_MK2206_60min_R1 2 ASETPPPVAQPKPEAPHPGLETTLQER 27 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 AS(0.189)ET(0.811)PPPVAQPKPEAPHPGLETTLQER;AS(0.065)ET(0.935)PPPVAQPKPEAPHPGLETTLQER 163.82 1.4892e-41 28271000.0 6124.5 6441.6 5546.0 5447.0 7375.2 5852.3 6061.5 5421.1 8621.0 9041.9 9461.6 True False 7158.165870351131 6769.449925701832 6332.5061945769985 6781.515244525125 6290.317849868364 6471.586501557664 7162.796088673134 6189.557526422465 6668.357264908104 6999.328510127718 7112.023593124429 1.006487925218824 0.9518317588606173 0.8903944301730057 0.9535282266331592 0.8844624553762094 0.9099500890033732 1.007138966130229 0.8702948528469787 0.9376174273880025 0.9841542872403208 1.0 12.796044394772846 -10.396983160776346 0.8288600133537574 0.9988665439165554 0.932930918507434 0.2019327201097435 0.043289661536459974 0.6457086794813232 0.8257173938516174 0.02461830550653217 0.007975177298461306 4.008822610326731e-11 10.396983160776346 -0.06593562540912135 ASET(ph)PPPVAQPKPEAPHPGLETTLQER ddPTM_A549_PD325901_60min_R1 2 ASETPPPVAQPKPEAPHPGLETTLQER 27 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 AS(0.036)ET(0.964)PPPVAQPKPEAPHPGLETTLQER;AS(0.024)ET(0.976)PPPVAQPKPEAPHPGLETTLQER 215.1 1.5179e-81 52099000.0 5913.9 5406.6 5932.9 5997.4 6849.2 5610.4 5477.299999999999 6265.6 6212.0 6124.4 7304.4 True False 6514.274774416919 5862.233156464347 6335.542271425946 6367.845776916353 6368.13582045726 5564.710762522194 5685.741648793567 6140.6276927318895 5950.931242811906 5737.704338803354 6406.005106406616 1.0169012771941164 0.9151152799740286 0.9890005028390938 0.9940431940255403 0.9940884708456628 0.8686709845043603 0.8875643328955957 0.9585736493701319 0.9289613642144006 0.8956758921508045 1.0 12.645209232787884 -3.265769910561519 13.189054760518559 0.958826971253812 0.957472399334717 0.0 0.05086443300082406 0.0 0.0 0.006518917198241126 0.0 0.0005422881188305417 3.265769910561519 -0.001354571919095049 ASEVPYAS(ph)GMPIK ddPTM_A549_PD325901_60min_R1 1 ASEVPYASGMPIK 13 0 A2A3N6 A2A3N6 PIPSL Putative PIP5K1A and PSMD4-like protein 1 AS(0.008)EVPYAS(0.992)GMPIK 42.809 0.028165 17429000.0 2305.8 2059.8 1590.0 2048.7 2527.6 2320.6 2149.9 2152.6 2806.6 2880.9 2791.4 True False 2539.8831185597564 2233.386574868728 1697.9069614467219 2175.243546064715 2350.0700957466247 2301.701802992479 2231.7156209704217 2109.6647043179687 2688.648362214405 2698.999482342531 2448.0754961425205 1.0375019571748907 0.9123029818271202 0.6935680554468792 0.8885524770344247 0.9599663488522618 0.9402086686539343 0.9116204236703398 0.8617645606282192 1.0982701989587167 1.102498467304377 1.0 11.257432334617057 -8.757644349338044 24.99669964464092 1.0464053740043935 0.8974225058835028 0.43460781718383856 0.08349433044765661 74.39140136379766 489992.7017214511 0.014849923367513292 0.016526021675413175 1.7472524200162956e-09 8.757644349338044 -0.14898286812089068 ASGDPGAS(ph)GMSPR ddPTM_A549_MK2206_60min_R1 1 ASGDPGASGMSPR 13 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 ASGDPGAS(0.542)GMS(0.458)PR 54.7 0.0068568 53294000.0 365.58 284.68 347.0 275.08 441.02 450.94 406.08 191.32 488.06 387.09 451.6 True False 427.2809664271319 299.1689960334076 396.2098177998951 342.4746123488105 376.1465422156613 498.658171490254 479.85947961534 218.4401958929269 377.5151892716676 299.6461001543192 339.45525647406276 1.258725438119058 0.8813208525355878 1.167193054882533 1.0088947094415621 1.1080887246310829 1.4689952857700281 1.4136162880482757 0.6435021751080693 1.112120616993636 0.8827263518224961 1.0 8.407077615446385 ASGDPGASGMS(ph)PR ddPTM_A549_MK2206_60min_R1 3 ASGDPGASGMSPR 13 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 AS(0.002)GDPGAS(0.049)GMS(0.949)PR;ASGDPGASGMS(1)PR;ASGDPGAS(0.003)GMS(0.997)PR 137.62 1.2418e-08 31822300.0 3336.5600000000004 3661.73 3523.7599999999998 3932.7 5056.09 3699.02 3353.66 3432.3 5173.79 5212.7 5553.39 True False 3899.6897569399616 3848.0964164866145 4023.482154382015 4896.211676545612 4312.345858761922 4090.447841189246 3962.976611521823 3918.8390359779055 4001.934825844901 4035.1474496226206 4174.329997233158 0.9342073481312608 0.921847678318969 0.963862980897263 1.1729335437761113 1.0330629973241798 0.9799052408172064 0.9493683092013749 0.9387947379760111 0.9587011157473116 0.9666575120551584 1.0 12.027328940395359 -7.4644897140987965 11.13935858492555 0.9736788650293383 1.0074869523087508 0.07904107211053324 0.0642495849018376 2.4928731061103973 471.17048500546673 0.010311163612578935 0.016475772376294568 3.4317076741253666e-08 7.4644897140987965 0.033808087279412535 ASGDPGASGMS(ph)PR ddPTM_A549_PD325901_60min_R1 5 ASGDPGASGMSPR 13 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 AS(0.001)GDPGAS(0.154)GMS(0.846)PR;ASGDPGASGMS(1)PR;ASGDPGAS(0.001)GMS(0.999)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR 141.37 2.6881e-12 148912000.0 12091.29 12815.119999999999 12363.92 12908.92 13597.9 14241.27 11398.720000000001 11639.56 12724.16 12962.24 13645.79 True False 13318.788859662754 13895.09513706755 13203.009961490778 13706.274670115561 12642.830414208349 14125.293818798022 11832.504527218922 11407.399844741829 12189.407804658322 12143.801954250283 11967.444337789871 1.1129183878972146 1.1610745573464414 1.10324389976892 1.1452967135877914 1.0564352803618895 1.1803099659460508 0.9887244254694507 0.9532026657287573 1.0185472738041113 1.0147364476059038 1.0 13.54682747545202 -7.773810833243594 24.999815252353816 1.002564419293655 1.124722130921424 0.78104369423019 0.03455810063337019 77.08286898503498 155766.19188897978 0.0050554371766315005 0.007011645446097202 1.6834071473523125e-08 7.773810833243594 0.122157711627769 ASGGAQS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 ASGGAQSPLR 10 0 H7BZV9;C9JU48;D3YTC9;Q6NXT1 H7BZV9 ANKRD54 Ankyrin repeat domain-containing protein 54 1 ASGGAQS(1)PLR;ASGGAQS(1)PLR 142.51 4.8181e-08 226700000.0 9793.3 10239.4 9143.8 9465.099999999999 12540.900000000001 10549.6 9088.900000000001 9616.5 13948.7 13531.0 14103.0 True False 11446.169616802965 10760.54172398648 10440.528334290146 11784.049924904488 10696.150222829772 11665.95166974228 10740.235481372794 10979.668324296108 10789.341721496763 10474.337702312376 10600.835877001113 1.0797421778442806 1.0150654013361207 0.9848778393920087 1.1116151652220556 1.0089912104040255 1.1004746988916199 1.0131498691225014 1.035736092105424 1.0177821679990935 0.9880671509156009 1.0 13.371890405475638 -8.848327938820239 0.9744701686593075 1.0050293171550986 1.0451032930497008 0.20590678755228276 0.03787162732292096 0.5954454523250607 1.1445894508609762 0.008116382314950545 0.008151245616470036 1.4179863858278766e-09 8.848327938820239 0.040073975894602265 ASGGAQS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 ASGGAQSPLR 10 0 H7BZV9;C9JU48;D3YTC9;Q6NXT1 H7BZV9 ANKRD54 Ankyrin repeat domain-containing protein 54 1 ASGGAQS(1)PLR;ASGGAQS(1)PLR 97.779 0.00050828 290350000.0 11594.4 11698.8 11771.7 11802.7 12974.8 11722.2 12602.599999999999 10908.3 13812.0 12150.099999999999 14155.1 True False 12771.454952653845 12684.698932942176 12570.598350982624 12531.725973123463 12063.494808630036 11626.738289683022 13082.19883940733 10690.72539910419 13231.529672523824 11382.940612450966 12414.112436571955 1.028785184434866 1.0217966848417672 1.0126054855077404 1.0094741800634106 0.9717565287302377 0.9365742697343927 1.0538166869559835 0.8611751708973838 1.0658458057415172 0.9169355175901936 1.0 13.599693497356595 ASGLLKS(ph)PASLK ddPTM_A549_MK2206_60min_R1 1 ASGLLKSPASLK 12 1 E7EX48;P51957-3;P51957;P51957-2 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 AS(0.001)GLLKS(0.996)PAS(0.003)LK 79.771 0.00024401 11491000.0 4053.2 4576.2 4350.0 4720.1 6933.8 5506.8 5409.0 4652.7 7001.9 6952.0 6755.3 True False 4737.281068774139 4809.109033469434 4966.89541045978 5876.5247118933385 5913.847205149317 6089.525920882001 6391.745284769937 5312.23447329616 5415.9808297366935 5381.5383716263095 5077.772573204682 0.9329447115793822 0.9470902771122557 0.9781642125269653 1.1573036458748975 1.1646538161942477 1.1992514105527932 1.2587695082089865 1.0461741633189185 1.06660563301254 1.0598226474388779 1.0 12.309980064669677 -6.073248011565788 6.261127931291311 1.0775572284699775 0.9450533118892067 0.40681551949533123 0.07932170915694199 0.23895555551680142 16.358051821225484 0.013661020005425718 0.03703552832660901 8.447962714895961e-07 6.073248011565788 -0.13250391658077076 ASGLLKS(ph)PASLK ddPTM_A549_PD325901_60min_R1 2 ASGLLKSPASLK 12 1 E7EX48;P51957-3;P51957;P51957-2 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 ASGLLKS(0.971)PAS(0.029)LK;AS(0.105)GLLKS(0.864)PAS(0.031)LK 86.641 8.209600000000001e-05 49448000.0 14394.400000000001 13461.0 13411.0 13850.8 15623.2 15783.5 14146.4 16799.9 16302.2 14782.5 16128.8 True False 15855.70889140279 14595.405711383608 14321.15110689433 14706.33245855087 14525.88032911404 15654.964409002741 14684.7489932071 16464.812815233417 15617.075226427592 13849.130427202761 14145.059848887098 1.1209361473751758 1.031837678122793 1.012448958144287 1.0396797620978557 1.0269225075252617 1.106744303399638 1.0381538961365697 1.1639973949299927 1.1040656874743664 0.9790789558442469 1.0 13.788010660455404 -5.247537400282177 22.92585081079609 1.0550075431216825 1.1209362877150975 0.1279377411389223 0.05170633393097354 1313.4630394971327 2165915.236668487 0.007321158752856435 0.18731090077671914 5.65539052277575e-06 5.247537400282177 0.06592874459341491 ASGNYATVISHNPETKK ddPTM_A549_PD325901_60min_R1 1 ASGNYATVISHNPETKK 17 1 P62917;E9PKZ0;G3V1A1 P62917 RPL8 60S ribosomal protein L8 0 50.831 0.005838 2147100.0 1343.8 1552.4 1752.8 1546.6 2173.1 2007.0 1822.3 1951.8 1793.0 1588.2 1714.3 False True 1480.2215867467262 1683.2261961482734 1871.7555484426496 1642.1299694165527 2020.4689527880162 1990.6556574187289 1891.6486237008226 1912.8698178425211 1717.6464453254584 1487.920780956092 1503.4519678430602 0.9845486376730335 1.1195743077599798 1.2449719635060768 1.092239728664194 1.3438865996408909 1.3240567041690328 1.2582035636394104 1.2723185434296485 1.1424684539737535 0.9896696487688594 1.0 10.554063062210494 -9.764019484754737 0.9642398783785626 1.0218537836902042 1.2070566050759222 0.36121132353726326 0.10284095596416004 0.4008542830716136 0.7705380329634417 0.035169045698773084 0.021359705338851016 1.721791324558791e-10 9.764019484754737 0.18520282138571798 ASGPPVSELITK ddPTM_A549_MK2206_60min_R1 1 ASGPPVSELITK 12 0 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 0 114.86 7.655e-05 1266800.0 2602.9 2921.4 2456.5 2628.7 3653.0 2813.3 2664.2 2647.1 4291.9 3538.3 3634.2 False True 3042.20588520483 3070.086781691714 2804.868638113669 3272.731618006825 3115.648539099837 3111.0015386826 3148.2506540366176 3022.3345314037565 3319.791502755952 2738.995572543924 2731.7278411825464 1.1136562871826499 1.123862610106391 1.0267745548544325 1.1980445374785513 1.1405413424168542 1.138840221116562 1.1524759555380018 1.1063820069628196 1.215271687284498 1.0026604888129087 1.0 11.415598041447168 -11.019780406498665 1.3107310101476526 1.0000970868618866 1.1423979609172767 0.5396714008705799 0.047167447596716296 0.285083688908779 0.8733409580607664 0.035783505020268246 0.008108522072893698 9.554755836222628e-12 11.019780406498665 0.14230087405539016 ASGPPVSELITK ddPTM_A549_PD325901_60min_R1 2 ASGPPVSELITK 12 0 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 0 ; 157.68 2.1640999999999998e-13 25680000.0 9136.3 9374.400000000001 9544.0 10339.7 10924.2 11137.1 10565.7 10287.0 11445.4 11022.0 11092.9 False True 10063.810450211426 10164.413587459658 10191.713232734277 10978.35978583753 10156.921878444078 11046.40315009373 10967.783495272884 10081.81771500461 10964.389640450634 10326.069038973716 9728.543623686803 1.0344621805167553 1.0448032080271101 1.0476093469858903 1.1284689888327897 1.044033132946464 1.135463187233723 1.1273818486632277 1.036313152819469 1.1270329932791612 1.061419821753389 1.0 13.24800813240782 -6.024432021600343 24.51973766321796 1.0727731799847746 1.0412760569242117 0.11996483762775423 0.0432722063076522 1396.4662221136402 1401483.7272022115 0.007635694649085247 0.020324669532977978 9.452963443638379e-07 6.024432021600343 -0.03149712306056296 ASGQAFELILS(ph)PR ddPTM_A549_MK2206_60min_R1 5 ASGQAFELILSPR 13 0 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR 256.96 5.087199999999998e-69 213292580.0 33926.0 36926.5 30840.0 27924.699999999997 44123.7 31951.2 28398.8 30144.6 42337.9 40582.1 37078.73 True False 39651.879388935035 38805.90112416616 35213.57573760452 34766.25275358741 37633.162180311956 35332.254776509944 33558.49435997862 34417.689363965736 32748.433249733505 31414.575424507486 27871.05802011185 1.4226901382904842 1.3923368497946396 1.26344596291229 1.247396231908382 1.3502595471314989 1.2677041090802534 1.20406244842814 1.2348899470960095 1.174997849959701 1.1271396802316804 1.0 14.766480149533193 -12.347863266142907 0.05196229173524728 1.0042235944685163e-10 1.961616659595331 0.7691511419142641 0.055316983879945866 40.05364969142272 0.27738662263035196 7.994375505867332 3.3186271673176218 4.48886695776782e-13 12.347863266142907 1.9616166594949087 ASGQAFELILS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ASGQAFELILSPR 13 0 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 ASGQAFELILS(1)PR;ASGQAFELILS(1)PR 232.78 8.363100000000001e-47 269100000.0 26899.0 27301.0 27416.0 28529.0 32487.0 36010.0 31682.0 32937.0 38377.0 41604.0 39916.0 True False 29629.76667800279 29601.75108286784 29276.614625800816 30291.171535939997 30205.225194065726 35716.74649907746 32887.675847055616 32280.045696423356 36764.14814961242 38977.11633981694 35006.5850483717 0.8464055159068135 0.8456052209024238 0.8363173553017732 0.8652992428162873 0.8628440949703746 1.0202865103729617 0.939471125264341 0.922113529549345 1.050206642516319 1.1134224114108475 1.0 15.095338710836666 -7.364942336707849 0.7313585122402978 1.0202854942268929 0.8318565967071531 0.721982415324037 0.04832782199815215 0.23840922659700897 0.25037636518071793 0.008156491978762068 0.020426709648505015 4.315763754203305e-08 7.364942336707849 -0.1884288975197398 ASGS(ph)ENEGDYNPGR ddPTM_A549_MK2206_60min_R1 2 ASGSENEGDYNPGR 14 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 AS(0.001)GS(0.999)ENEGDYNPGR;ASGS(1)ENEGDYNPGR 150.05 2.0118e-13 56317000.0 1434.52 1287.62 1312.53 1466.63 2316.3 1553.1799999999998 1012.85 1258.41 1951.68 1983.23 2152.95 True False 1676.6319053532723 1353.1543581303079 1498.6664903656956 1825.9544158395236 1975.5753383840558 1717.5364766825571 1196.871734457243 1436.793471218996 1509.627596192535 1535.2169655869461 1618.3130966028184 1.0360367897120015 0.8361511508316067 0.9260670839973512 1.1283072599935007 1.2207621272615332 1.0613128450162268 0.7395798359228075 0.8878340503053022 0.9328402515938126 0.9486526240254073 1.0 10.66027503904165 ASGS(ph)ENEGDYNPGR ddPTM_A549_PD325901_60min_R1 2 ASGSENEGDYNPGR 14 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASGS(1)ENEGDYNPGR;AS(0.001)GS(0.999)ENEGDYNPGR 309.06 8.104299999999999e-136 88029000.0 10603.2 11541.400000000001 11685.7 9824.5 12556.0 12009.3 11182.8 9893.8 10671.099999999999 8888.400000000001 9975.400000000001 True False 11679.62905833671 12514.03428254682 12478.761873822617 10431.337051941626 11674.109875848479 11911.500242470724 11608.367573462956 9696.460397464054 10222.630776749851 8327.184907096169 8748.489039270646 1.3350452867813654 1.430422353662811 1.426390525016073 1.1923587038992596 1.3344144141285612 1.3615494274499058 1.3268997104934062 1.108358295236824 1.168502438633918 0.9518426404510189 1.0 13.094818153746145 -8.790681110411006 0.3094173777682379 0.9714678688203155 1.4155713582569416 0.7888944282986138 0.07286100049898118 0.4527144810964074 0.1342456913872609 0.06851437324571026 0.060748431318100204 1.619268582245244e-09 8.790681110411006 0.44410348943662603 ASGS(ph)ENEGDYNPGRK ddPTM_A549_MK2206_60min_R1 2 ASGSENEGDYNPGRK 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 AS(0.003)GS(0.997)ENEGDYNPGRK;AS(0.013)GS(0.987)ENEGDYNPGRK 97.384 6.1691e-06 42153000.0 3043.2 3803.1000000000004 3703.8 3712.3 4815.0 3873.6 4080.7999999999997 3858.1 5525.1 6470.3 6187.799999999999 True False 3556.8177609033487 3996.661545646523 4229.054533623203 4621.813666651481 4106.719878391932 4283.50178091242 4822.2285372692095 4404.997489935718 4273.673671771693 5008.654736181486 4651.198485407893 0.7647099499327062 0.8592756379211004 0.9092397468933924 0.9936823124515971 0.8829379978678308 0.92094581522396 1.036771178954819 0.947067192199048 0.9188327879748412 1.0768525041223318 1.0 12.183386791457234 -4.116543369643021 0.6606842649501319 0.9617269263901546 2.4222649206144594e-11 0.5884091631028057 0.05360691170617016 5.396885756800139 0.5250482187081151 0.00737593748868922 5.56654074906995 7.646393259892329e-05 4.116543369643021 -0.9617269263659319 ASGS(ph)ENEGDYNPGRK ddPTM_A549_PD325901_60min_R1 1 ASGSENEGDYNPGRK 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 AS(0.038)GS(0.962)ENEGDYNPGRK 103.9 1.0960999999999998e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASGSSAGS(ph)MK ddPTM_A549_PD325901_60min_R1 1 ASGSSAGSMK 10 0 Q96NE9-3;Q96NE9-2;Q96NE9;G3V2L4;H0YJC1 Q96NE9-3 FRMD6 FERM domain-containing protein 6 1 ASGSS(0.007)AGS(0.993)MK 61.343999999999994 0.0030059 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASGTQGASEDNS(ph)GGGGKKPK ddPTM_A549_PD325901_60min_R1 2 ASGTQGASEDNSGGGGKKPK 20 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 ASGTQGAS(0.002)EDNS(0.998)GGGGKKPK;ASGTQGASEDNS(1)GGGGKKPK 65.21300000000001 0.0003502 10764700.0 1619.15 1355.1599999999999 1398.1 1484.02 1510.76 1810.44 1558.88 1830.93 1925.95 1332.26 1854.71 True False 1783.5249160447702 1469.3640891344332 1492.9834734582769 1575.6845449460434 1404.6494294390604 1795.69637688947 1618.2040314518676 1794.410664813202 1845.0090191715376 1248.1408762350868 1626.5924279753867 1.0964792933806515 0.9033388228441128 0.9178595988649644 0.9687027419076897 0.8635534048239866 1.1039620903218923 0.9948429634988771 1.103171657479494 1.1342786228680612 0.7673347390339466 1.0 10.66763708773164 -7.275118254147222 24.886555942217537 1.0650200000258834 0.9466501498654576 0.0 0.11204003251178193 591.1522553882472 1075506.624631512 0.010888830925841492 0.017464333297264305 5.307399092586965e-08 7.275118254147222 -0.11836985016042578 ASGYQSSQK ddPTM_A549_PD325901_60min_R1 2 ASGYQSSQK 9 0 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 0 ; 77.67699999999999 0.0052453000000000005 2746800.0 2360.2 2190.6 2012.46 1972.25 2623.3 2391.6 2298.0 2310.8 2325.1000000000004 2904.3 3466.1 False True 2599.805766512594 2375.2095499113675 2149.0376375050755 2094.0714031952634 2439.048457893701 2372.123602532453 2385.4516475138503 2264.70928121247 2227.3841327530536 2720.9220023490625 3039.791673418207 0.8552578748230945 0.7813724771607373 0.7069687229876875 0.6888864857112088 0.8023735571165054 0.7803572933223513 0.7847418191100708 0.7450212134655377 0.7327423626528947 0.8951014722957709 1.0 11.569756739243749 -10.735966892415163 0.8238905446576227 1.011793318504107 0.7606686115186608 0.6196067119015826 0.053104308417272886 0.24813917514146858 0.27645900586844985 0.04038895572300412 0.008661897377331014 1.8366783535700102e-11 10.735966892415163 -0.2511247069854462 ASHS(ph)AVDITK ddPTM_A549_MK2206_60min_R1 1 ASHSAVDITK 10 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 1 AS(0.082)HS(0.918)AVDITK 76.07300000000001 0.00046082 4285700.0 2660.7 3175.9 3151.4 2729.4 3478.2 2702.1 2593.6 2467.8 3923.4 5123.7 4202.0 True False 3109.761112130503 3337.5397446343213 3598.3159072466574 3398.1031225274205 2966.561387543677 2988.0344284911853 3064.8235478978186 2817.6182073205377 3034.756164382374 3966.2526114358034 3158.5274306997585 0.984560425818923 1.0566758775607352 1.139238454056885 1.0758504388782797 0.9392229298722437 0.9460213640852246 0.9703330476439205 0.892067037295385 0.9608136167777517 1.255728404599322 1.0 11.625036386233791 -6.753710386660816 24.993308566831157 0.968192301093704 1.0689207304461303 0.06447419350147299 0.09682824813111753 109.263839453639 353324.327894867 0.006615295519338756 0.013570520551475961 1.7631514284896457e-07 6.753710386660816 0.10072842935242632 ASIANSDGPTAGSQT(ph)PPFK ddPTM_A549_MK2206_60min_R1 1 ASIANSDGPTAGSQTPPFK 19 0 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPT(0.002)AGS(0.027)QT(0.971)PPFK 111.33 4.798e-10 2495600.0 873.63 898.15 598.81 727.15 1334.2 730.31 1103.1 825.36 1304.7 1053.3 1148.3 True False 1021.0773857971852 943.8619986911795 683.7302622384876 905.3017826430039 1137.9409474040524 807.5909194594562 1303.5189912423211 942.3573075589906 1009.1875331777748 815.3587984513799 863.1454185322541 1.1829726067868012 1.093514462830818 0.7921379729978117 1.0488403960742039 1.3183652753890274 0.9356371500328807 1.510196269660917 1.0917711979071074 1.1691975784264252 0.9446366521157773 1.0 9.753459827883194 -5.260417455216882 19.528296173577367 1.0955295658130577 1.182973084737987 0.01948301797957086 0.18555466838865228 17.825326913697968 339268.6352749329 0.023658924306800107 0.19727258020718683 5.490128945884159e-06 5.260417455216882 0.08744351892492919 ASIANSDGPTAGSQT(ph)PPFK ddPTM_A549_PD325901_60min_R1 1 ASIANSDGPTAGSQTPPFK 19 0 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPT(0.004)AGS(0.014)QT(0.982)PPFK 153.11 1.1860999999999998e-21 10025000.0 3208.8 3121.6 3422.2 3543.4 3801.6 4368.3 3345.6 3237.5 3744.2 3815.2 4269.5 True False 3534.5550138062886 3384.6681872561508 3654.4510713603563 3762.2677703547215 3534.588730808024 4332.726013105249 3472.9186387825675 3172.925522730382 3586.844294806233 3574.3076208938955 3744.3785665904143 0.9439630504628199 0.9039332233808262 0.9759833324460179 1.0047776162175281 0.9439720551617669 1.1571281952536592 0.9275020078819021 0.8473837424028441 0.9579277925608815 0.9545796605038835 1.0 11.870510587247077 -5.778486288456844 22.18855402208437 0.9782284367570319 0.9239482144941535 0.06723608225630762 0.07124133392486087 110.97189109359479 144446.4519012954 0.00965404200166184 0.03018207395896306 1.6653814063682364e-06 5.778486288456844 -0.05428022226287832 ASIANSDGPTAGSQT(ph)PPFKR ddPTM_A549_MK2206_60min_R1 2 ASIANSDGPTAGSQTPPFKR 20 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPT(0.002)AGS(0.007)QT(0.991)PPFKR;ASIANSDGPT(0.006)AGS(0.037)QT(0.958)PPFKR 192.12 1.5158e-44 61234000.0 7984.1 8610.0 8622.5 7471.8 10631.1 8389.3 8357.5 8110.9 13266.8 12689.8 12623.3 True False 9331.620887496205 9048.212223716593 9845.300155560795 9302.391335421848 9067.279272933016 9277.050157633354 9875.94956876775 9260.64491358949 10261.89098272623 9823.165366551142 9488.58622464356 0.9834574578940234 0.9535890816080442 1.0375940021486851 0.9803769618767724 0.9555985537006203 0.9777062607640314 1.0408241370161275 0.9759773157288633 1.0814984171271225 1.0352612216389645 1.0 13.211977430007606 -7.979148026298248 1.6304111987249892 1.0359384729021432 0.9818319828740482 0.27661950771386623 0.033218741712964656 0.36394779300680974 1.943078061721573 0.006651109180947346 0.009540404037475279 1.0491847602651491e-08 7.979148026298248 -0.05410649002809509 ASIANSDGPTAGSQT(ph)PPFKR ddPTM_A549_PD325901_60min_R1 2 ASIANSDGPTAGSQTPPFKR 20 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPTAGSQT(1)PPFKR;ASIANSDGPTAGSQT(1)PPFKR 193.5 5.668100000000001e-45 93393000.0 12215.0 11880.3 11702.5 13523.7 15042.2 13061.8 13217.599999999999 13551.4 14513.3 14255.7 15235.6 True False 13455.057807792267 12881.49457491648 12496.70202284922 14359.028234448879 13985.687764772862 12955.429031425982 13720.603000948247 13281.106696132356 13903.35647236027 13355.592669107024 13361.717786425788 1.0069856303552005 0.9640597699199149 0.9352616349631826 1.0746393887346029 1.0466983353727892 0.9695930746709411 1.0268592122853435 0.9939670114590112 1.040536605741272 0.99954159207546 1.0 13.705817872589648 -6.245600899271315 24.997858733824973 1.0196794228456414 0.9682980912874236 0.33713741990803925 0.03134249633443117 707.8492676971266 1117194.6774427784 0.004311441839013001 0.011371709268217716 5.680663978395927e-07 6.245600899271315 -0.05138133155821778 ASIDSS(ph)LENLSTASSR ddPTM_A549_MK2206_60min_R1 2 ASIDSSLENLSTASSR 16 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ASIDS(0.148)S(0.852)LENLSTASSR;ASIDS(0.261)S(0.739)LENLSTASSR 174.52 3.5369e-28 12934200.0 3009.8 3491.1 3239.9 2871.8 3937.0 2930.5 2874.7 3215.3 4165.7 4631.6 3846.4 True False 3517.7806574549513 3668.7820783062675 3699.366538011185 3575.391128920002 3357.8725153123623 3240.6035648915367 3396.995779280485 3671.0786214432783 3222.175601255965 3585.3183432140972 2891.232724760482 1.2167061569719795 1.2689335060740223 1.27951185192733 1.2366320767956158 1.1613982114118946 1.1208380207995874 1.1749299010725267 1.2697278188657057 1.1144642815022436 1.2400656344643148 1.0 11.497469025384568 -9.860380136547615 0.21007010713100827 0.8943458991441302 1.2885791685444972 0.0 0.08746535150342544 1.627919739156191 0.1654812160463738 0.19893860120539433 0.07763343595585606 1.379176547377894e-10 9.860380136547615 0.39423326940036696 ASIDSS(ph)LENLSTASSR ddPTM_A549_PD325901_60min_R1 1 ASIDSSLENLSTASSR 16 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ASIDS(0.061)S(0.939)LENLSTASSR 184.8 4.4107e-34 6524900.0 3194.7 3350.1 3417.3 3341.8 3708.6 3169.7 3324.5 3812.4 3547.1 3641.2 3485.1 True False 3519.0235921861595 3632.424684176973 3649.218527894265 3548.2153962215407 3448.120729975442 3143.8870141106863 3451.0156667362016 3736.3586912300593 3398.0277223725197 3411.294010588922 3056.45479386913 1.151341612918629 1.188443778544727 1.1939383285544238 1.160892483454629 1.1281438668394328 1.0286057626034368 1.129091021944284 1.2224485370190106 1.1117546149180884 1.1160950318753464 1.0 11.57764351391334 -14.999999999988823 0.14961707148228268 0.44313806646732684 1.192937247673109 0.12185755957701838 0.06005079801742843 33.62880114022079 0.3315444496680994 5.461115838597085 0.09937664672573017 1.0000000000257357e-15 14.999999999988823 0.7497991812057823 ASIGQS(ph)PGLPSTTFK ddPTM_A549_MK2206_60min_R1 4 ASIGQSPGLPSTTFK 15 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ASIGQS(1)PGLPSTTFK;AS(0.001)IGQS(0.884)PGLPS(0.099)T(0.014)T(0.002)FK;ASIGQS(0.999)PGLPS(0.001)TTFK;ASIGQS(1)PGLPSTTFK 166.04 2.3567e-20 26675400.0 9471.0 10516.8 10358.1 8878.2 13206.3 9335.800000000001 9576.6 9152.0 13676.0 13287.100000000002 13743.699999999999 True False 11069.473256281432 11052.060199115285 11827.034333582405 11053.359398557544 11263.670764279828 10323.708159397509 11316.544258481741 10449.324026824517 10578.407836084352 10285.534881708276 10330.759983176646 1.0715061887322674 1.069820634407658 1.144836812862016 1.0699463947045167 1.0903041772940618 0.9993173954490647 1.0954222416269874 1.01147679781942 1.0239718910623221 0.9956222870783933 1.0 13.334658769631401 -7.808632133656492 0.5370378047299864 1.0057942064415355 1.0965683361131442 0.5305751817861384 0.032054494300468236 0.4652014390440046 0.2782156848733043 0.008025631821580245 0.016080428170507293 1.5537025064383494e-08 7.808632133656492 0.0907741296716087 ASIGQS(ph)PGLPSTTFK ddPTM_A549_PD325901_60min_R1 2 ASIGQSPGLPSTTFK 15 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ASIGQS(0.998)PGLPS(0.002)TTFK;ASIGQS(0.984)PGLPS(0.012)T(0.003)TFK 224.64 4.6891000000000005e-54 49546000.0 17646.7 16397.0 16706.0 17420.300000000003 21186.5 17531.7 18275.1 18711.9 18992.2 18802.3 20568.8 True False 19438.179993186062 17778.832735276508 17839.76962133894 18496.312366628194 19698.433329457122 17388.9276478166 18970.56893101843 18338.67647529843 18194.023881154575 17615.1195691794 18038.967996366075 1.0775660778987943 0.9855792603467133 0.9889573297614773 1.0253531338574495 1.0919933631139733 0.9639646598031315 1.0516438043928027 1.016614502503288 1.0085956072886064 0.9765037319611598 1.0 14.138829184378174 -8.791022379310844 2.559809563548426 1.0035693658367888 1.0240149523033308 0.10566686430588101 0.03733915440827108 0.6273006570046511 8.04747727924454 0.006282468875753587 0.00674651756650399 1.617996659694086e-09 8.791022379310844 0.020445586466542043 ASINS(ph)LLSDKR ddPTM_A549_MK2206_60min_R1 2 ASINSLLSDKR 11 1 Q04656-5;Q04656;Q04656-2;Q04656-3;Q04656-4 Q04656-5 ATP7A Copper-transporting ATPase 1 1 AS(0.094)INS(0.901)LLS(0.005)DKR;ASINS(1)LLSDKR 108.58 4.9231000000000003e-05 8804700.0 1965.54 1835.1 1728.0099999999998 1591.04 3188.8 2330.76 2231.3199999999997 2136.84 3397.4 2818.2 3093.4 True False 2297.275099160742 1928.4987516541594 1973.0678018916349 1980.8448714245003 2719.731744177817 2577.3994761667286 2636.721961326095 2439.7436137980444 2627.894324532977 2181.566662675095 2325.223406503244 0.9879803775997026 0.8293821343190013 0.8485497764960169 0.8518944312552604 1.169664702570601 1.1084524045982818 1.1339650005034545 1.049251270641138 1.1301685322723034 0.9382180897429614 1.0 11.183153621085015 -6.748870001470578 24.999768838213058 1.0772827386094057 0.8736679540277568 0.6288846719579227 0.07245483584539483 104.67211882613451 208185.48352683522 0.009766729635462924 0.020222479105131093 1.7829123715127045e-07 6.748870001470578 -0.20361478458164894 ASINS(ph)LLSDKR ddPTM_A549_PD325901_60min_R1 2 ASINSLLSDKR 11 1 Q04656-5;Q04656;Q04656-2;Q04656-3;Q04656-4 Q04656-5 ATP7A Copper-transporting ATPase 1 1 ASINS(0.999)LLSDKR;AS(0.022)INS(0.978)LLSDKR 73.91 0.00060877 14325900.0 1509.45 1524.65 1625.0900000000001 1685.2199999999998 2160.57 2089.3 1760.6 1990.42 2137.3 2252.7 2152.2200000000003 True False 1662.6882528016417 1653.137606259641 1735.3783798600327 1789.312211987691 2008.8190167618611 2072.285433505208 1827.6005964372873 1950.7195116457174 2047.4767136609598 2110.4641375518136 1887.5105840466633 0.8808894990336841 0.8758295822190589 0.9194006086787222 0.9479746641481377 1.064269007941202 1.097893411046418 0.9682597871949761 1.0334879857804768 1.0847497921157838 1.11812042559632 1.0 10.882269018905802 -6.5025541040003505 2.43244540852812 1.0406191575093617 0.8883751481090139 0.7301788904192656 0.043113606104740555 0.11984738059063828 1.4045191645640596 0.006145828888184397 0.015618271316225367 3.143734752327448e-07 6.5025541040003505 -0.15224400940034788 ASIQECILPDS(ph)PLYHNK ddPTM_A549_MK2206_60min_R1 2 ASIQECILPDSPLYHNK 17 0 Q9NXE4-3;Q9NXE4-6;Q9NXE4-2;Q9NXE4;Q9NXE4-4 Q9NXE4-3 SMPD4 Sphingomyelin phosphodiesterase 4 1 ASIQECILPDS(0.995)PLY(0.005)HNK;ASIQECILPDS(0.995)PLY(0.005)HNK 74.69800000000001 0.0001563 5624900.0 1492.92 2239.23 2387.8999999999996 1823.81 3031.0 2182.25 1990.84 1797.92 2922.2 2569.8999999999996 2981.3999999999996 True False 1744.888397610354 2353.1972424753662 2726.5401265831993 2270.6435318739414 2585.1439151414197 2413.1742465396874 2352.5498581496363 2052.7806658990753 2260.3263657945085 1989.3578051269353 2241.036097545993 0.7786078945899458 1.050048789955768 1.2166426634398477 1.013211493719521 1.1535485385408275 1.076811859113823 1.049759912714371 0.9159962519777957 1.0086077454395488 0.8876955651474541 1.0 11.12995017194465 -8.030587968207993 24.09755471122436 0.9968734338030041 1.0594432301286967 0.09903078691469103 0.11019472428809056 909.7476177211068 716708.258199918 0.016185089208565193 0.02091039549698336 9.31991672315094e-09 8.030587968207993 0.0625697963256926 ASITALEAK ddPTM_A549_PD325901_60min_R1 1 ASITALEAK 9 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 126.07 0.0001827 3775100.0 3333.3 3242.4 3208.3 3278.1 4045.4 4109.3 3446.3 3287.9 4053.9 3919.6 4289.6 False True 3671.694162154234 3515.6484272037883 3426.034531075167 3480.5807918947353 3761.2650598723676 4075.835223234074 3577.4508323877203 3222.3202551923464 3883.5286808169967 3672.1157870768793 3762.006394014814 0.9759935995844499 0.9345142083748262 0.9106934364933129 0.9251926837317942 0.9998029418175297 1.0834205996349575 0.9509422520066119 0.8565430033077338 1.0323025200051545 0.9761056740677139 1.0 11.877286585571474 -7.229047192042851 0.3744208822873447 1.013041233645367 0.9279518440855437 0.0 0.05940198533707453 2.634348940555831 0.6499513930792529 0.023490525494115528 0.08492973809157565 5.901369502264087e-08 7.229047192042851 -0.08508938955982326 ASLAGS(ph)DGGGGGGSAR ddPTM_A549_MK2206_60min_R1 2 ASLAGSDGGGGGGSAR 16 0 A6NIX2 A6NIX2 WTIP Wilms tumor protein 1-interacting protein 1 ASLAGS(0.983)DGGGGGGS(0.017)AR;ASLAGS(0.967)DGGGGGGS(0.033)AR 72.898 0.0007178999999999999 5125000.0 1816.1799999999998 1668.54 1839.3400000000001 1749.55 2047.5099999999998 1856.33 1491.13 1211.06 2258.88 2249.85 2705.8 True False 2122.706782662149 1753.4615590894389 2100.1860699482986 2178.189828540284 1746.3239913200969 2052.7656084678733 1762.0490195006455 1382.7314637157024 1747.24728669013 1741.6073224113136 2033.8751837190412 1.0436760326563772 0.8621284005654407 1.0326032230296476 1.0709555069929888 0.8586190565179409 1.0092878977530422 0.8663506165991228 0.679850698206224 0.8590730152354787 0.856300001274758 1.0 10.990015430251386 -6.772431903559115 24.99886033319003 0.9088678543216897 0.9944872326462898 0.23400572566307343 0.09892711853765178 356.4329737978414 810589.8791621078 0.015807791413729545 0.030075543500467112 1.6887606327640924e-07 6.772431903559115 0.08561937832460009 ASLAS(ph)LDS(ph)NPSTNEK ddPTM_A549_PD325901_60min_R1 1 ASLASLDSNPSTNEK 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 2 ASLAS(1)LDS(0.998)NPS(0.002)TNEK 126.63 5.2904e-08 4094200.0 2083.3 2545.8 2712.9 2715.0 2720.0 2925.8 2907.5 3010.4 1912.6 2413.3 3520.1 True False 2294.7950823555975 2760.3435004858766 2897.0137079929614 2882.6993837876225 2528.956583490592 2901.973254845897 3018.14650354505 2950.355210386885 1832.22007324566 2260.923826143646 3087.150015752412 0.7433377291826556 0.8941397361323613 0.93841040869758 0.9337736647323372 0.819188108963414 0.9400169217687392 0.9776481506064603 0.9556889672780652 0.5934988788677651 0.7323660381280839 1.0 11.592059875073334 ASLAS(ph)LDSNPSTNEK ddPTM_A549_PD325901_60min_R1 2 ASLASLDSNPSTNEK 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 ASLAS(0.964)LDS(0.036)NPSTNEK;ASLAS(0.84)LDS(0.155)NPS(0.005)T(0.001)NEK 231.71 1.3788e-54 46130000.0 13155.099999999999 13089.7 13968.8 14512.099999999999 15780.4 14364.3 15092.5 15968.400000000001 15637.1 15502.099999999999 15901.099999999999 True False 14490.596067727221 14192.814957306155 14916.806769218205 15408.479457629599 14672.039143424601 14247.32190326848 15666.853346432901 15649.89773503254 14979.927066480046 14523.294760395058 13945.365505377871 1.0390976172076012 1.0177442069792189 1.069660509325891 1.1049175765014905 1.0521086118371366 1.0216528134579306 1.1234451574891426 1.1222292975395542 1.0741867655389317 1.041442388497764 1.0 13.767498127173877 -10.572240632880188 0.993685067557594 1.0022060409842954 1.0695599497953159 0.18273029522202078 0.03647394086141462 0.4778885827312424 0.8808534369418028 0.02098078646875729 0.0066241367598159975 2.6776842686209477e-11 10.572240632880188 0.06735390881102044 ASLENS(ph)LREVEAR ddPTM_A549_MK2206_60min_R1 2 ASLENSLREVEAR 13 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 ASLENS(1)LREVEAR;ASLENS(1)LREVEAR 133.86 7.909899999999999e-09 47218000.0 2350.2 2177.8 2322.2200000000003 2285.41 2587.7 1991.6599999999999 2411.67 2259.33 3273.6 3438.3 3278.1 True False 2746.85630312666 2288.6407178641093 2651.545714960439 2845.3355525959546 2207.0527579054624 2202.41613924309 2849.8392218378845 2579.5969464079385 2532.134826864998 2661.585641996942 2464.0572990425694 1.1147696541772687 0.9288098611803306 1.0760893084713248 1.1547359526507497 0.8956986344282788 0.8938169335992543 1.1565636979891718 1.0468900002488835 1.0276282243310173 1.080163859432621 1.0 11.266820089430052 -9.037382053216694 0.003864550486801163 3.7268383928332515e-05 2.0409104762472827 0.0 0.09208466101398759 36727.30395221034 95.59563825724086 25333.987794554097 25145.890400654727 9.175250853169442e-10 9.037382053216694 2.0408732078633545 ASLENS(ph)LREVEAR ddPTM_A549_PD325901_60min_R1 2 ASLENSLREVEAR 13 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 ASLENS(1)LREVEAR;AS(0.004)LENS(0.996)LREVEAR 156.67 6.139899999999999e-19 59374000.0 4057.1000000000004 4688.9 4630.4 4466.0 5382.5 4754.4 4759.2 5041.1 5402.3 5505.6 5959.0 True False 4468.973805320837 5084.050058695982 4944.646788857165 4741.854676978092 5004.451768616953 4715.681742716297 4940.313960334166 4940.5513058335555 5175.260118004308 5157.975476408425 5226.080777213325 0.8551291102897578 0.9728227089147526 0.9461481748266762 0.907344313860102 0.9575917368972338 0.9023361757586178 0.9453190968411443 0.945364512423013 0.9902755695184422 0.9869681882641669 1.0 12.351513708589911 -8.657628775843701 1.7666103987290742 0.9967177640968273 0.9281520013433991 0.4738891587958003 0.030198173016298322 0.18704207085857513 1.1435449527836556 0.0051207682525499605 0.005720482873369776 2.1997393520674473e-09 8.657628775843701 -0.06856576275342818 ASLENSLR ddPTM_A549_PD325901_60min_R1 2 ASLENSLR 8 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 153.08 0.0014196 77899000.0 21161.5 19212.9 22148.8 21239.4 23641.1 23811.5 21734.5 21730.8 24960.0 23778.4 25935.1 False True 23309.799901727063 20832.038510678405 23651.950759554187 22551.309499822775 21980.63069336743 23617.587038677673 22561.618291074756 21297.362146517185 23911.018000738102 22277.02776595287 22745.247116144543 1.0248206925473147 0.9158853453780177 1.0398634333924677 0.9914734882706941 0.9663834638123413 1.0383526245320036 0.9919267166396514 0.9363434056251844 1.051253383998897 0.9794146290079507 1.0 14.473277488450266 -8.792232206470498 24.999967250762452 1.0242029787153994 0.9886343560474938 0.02541378244945136 0.040754317079264045 278.5573269582915 226152.79565571956 0.006644875912644773 0.0070744042663245695 1.6134956301242027e-09 8.792232206470498 -0.035568622667905614 ASLEVSRS(ph)PR ddPTM_A549_MK2206_60min_R1 1 ASLEVSRSPR 10 1 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.079)RS(0.921)PR 64.65 0.0016584 2317800.0 828.27 832.92 767.84 507.0 965.01 700.29 763.33 831.58 1095.0 883.53 1230.6 True False 968.0617267427112 875.3120703110366 876.7312579235487 631.2150227600953 823.0583073410166 774.3942229851201 902.017180296438 949.4590116069426 846.9842483556858 683.9399593617655 925.0080571678069 1.0465441022283917 0.9462750767718395 0.947809320286277 0.6823886752865178 0.8897850142636159 0.8371756515896339 0.9751452144733069 1.0264332340131173 0.9156506711400821 0.7393881102569587 1.0 9.853322121874392 -7.781470517956841 24.876572326984657 0.9662018430899492 0.8870996151131115 0.0 0.11113715877317512 335.9467629389656 417209.49032325984 0.014200935040926132 0.019635104616871152 1.6539770610493942e-08 7.781470517956841 -0.07910222797683764 ASLGS(ph)LEGEAEAEAS(ph)SPK ddPTM_A549_MK2206_60min_R1 2 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.094)LGS(0.906)LEGEAEAEAS(0.536)S(0.464)PK;AS(0.019)LGS(0.981)LEGEAEAEAS(0.592)S(0.408)PK 57.498999999999995 0.0080748 6457000.0 1512.74 1713.83 1520.27 1559.8600000000001 2606.8 1441.47 1315.69 1400.95 2639.5 2482.2 2230.2 True False 1768.0535290578773 1801.0566266402086 1735.867146128665 1942.025770024776 2223.3431732070803 1594.0053986296534 1554.7338424327895 1599.5389527294378 2041.6574644153723 1921.4692960372292 1676.3797896112799 1.054685543225175 1.0743726676983136 1.035485608264926 1.1584640795956471 1.3262765317175713 0.950861737004878 0.927435329432898 0.9541626322638619 1.2178967302443995 1.1462016590421797 1.0 10.711133318256296 -3.6961305385664165 16.105193664382593 1.085212377796392 0.37207527065993606 0.0 0.11897424598736141 0.0 0.0 0.016886166346007217 0.0 0.00020131190633228014 3.6961305385664165 -0.713137107136456 ASLGS(ph)LEGEAEAEAS(ph)SPKGK ddPTM_A549_MK2206_60min_R1 1 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.021)LGS(0.979)LEGEAEAEAS(0.529)S(0.471)PKGK 77.693 8.4274e-05 21904000.0 1752.7 1909.9 1686.0 1697.5 2415.1 1994.4 1910.7 1613.6 2991.6 3324.9 3215.3 True False 2048.5129105991396 2007.1057521575287 1925.1001521919986 2113.387576203671 2059.8419892636234 2205.4460842244266 2257.849457498599 1842.3327414427492 2314.007376603536 2573.8027807566637 2416.852272234397 0.8475954174498531 0.8304627366826791 0.7965319909322509 0.8744380450898761 0.8522829520561822 0.9125282954036228 0.9342107845967769 0.7622860373420755 0.9574467596499889 1.0649400504637236 1.0 11.238913577116733 -8.919968043649085 0.4303889654930242 1.0092137451456045 0.8320180684525229 0.5990863061904197 0.05453618760922121 0.4702776569929921 0.22135334351195327 0.027874904556471975 0.022873171040971214 1.2023529031550401e-09 8.919968043649085 -0.17719567669308156 ASLGS(ph)LEGEAEAEAS(ph)SPKGK ddPTM_A549_PD325901_60min_R1 1 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.009)LGS(0.991)LEGEAEAEAS(0.563)S(0.437)PKGK 180.9 4.3479999999999994e-44 84259000.0 3455.2 4266.9 3590.4 3351.5 4044.3 3637.0 3984.7 4487.5 3917.6 4167.1 4506.5 True False 3805.969360416197 4626.486637686853 3834.0661348291223 3558.514543191243 3760.2423200775697 3607.3814778435085 4136.339939011506 4397.993292124354 3752.9568958209798 3903.9885948382675 3952.229069057199 0.9629931094363687 1.1706018443891708 0.9701022050687299 0.9003816532426152 0.9514231726893736 0.9127460516108309 1.0465840584483699 1.112788053343652 0.9495798017386287 0.9877941097603335 1.0 11.948450851831522 ASLGS(ph)LEGEAEAEASS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.001)LGS(0.999)LEGEAEAEAS(0.297)S(0.703)PK;AS(0.006)LGS(0.994)LEGEAEAEAS(0.115)S(0.885)PK 163.56 5.758299999999999e-23 18387800.0 5078.0 5614.5 5097.9 4809.7 7707.2 6114.6 6151.8 6042.2 9628.3 8256.599999999999 8337.0 True False 5935.04225481967 5900.254068531569 5820.858876547798 5988.076715915636 6573.481089666106 6761.6429134570135 7269.5024298109975 6898.700353461444 7447.505423235668 6391.4283255422615 6266.692810505449 0.9470772597741185 0.9415259766108872 0.9288565839368641 0.9555401703873624 1.0489553722254197 1.0789810699068945 1.1600221439966618 1.1008518467502508 1.1884267584890567 1.019904520423868 1.0 12.613488559482464 -6.8670459847650696 2.2446298402695373 1.0972702102533973 0.9381642094614039 0.6522929154382863 0.05063673641092299 0.18798884951807696 1.9246645761359369 0.010371006174046231 0.022151614544644 1.358169630764923e-07 6.8670459847650696 -0.15910600079199344 ASLGS(ph)LEGEAEAEASS(ph)PK ddPTM_A549_PD325901_60min_R1 3 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 ASLGS(1)LEGEAEAEAS(0.009)S(0.991)PK;AS(0.004)LGS(0.996)LEGEAEAEAS(0.062)S(0.938)PK;ASLGS(1)LEGEAEAEAS(0.02)S(0.98)PK 321.3 5.9960999999999984e-173 124889000.0 10898.87 10678.52 10992.1 9833.99 11481.4 10660.4 10320.0 11003.099999999999 10726.66 10692.5 11540.5 True False 12005.315259075971 11578.4363566692 11738.090006866985 10441.413227688263 10674.986072679736 10573.585236844356 10712.73324732068 10783.634538735036 10275.855783164958 10017.373725206533 10121.09166125698 1.1861680202968325 1.1439908602933477 1.1597652110789385 1.0316489146775991 1.0547267458848373 1.044707981187395 1.058456301539929 1.0654616023303332 1.015291247929352 0.9897522975266123 1.0 13.305077287105634 -2.0000000000000004 0.24832424004928633 0.9992283883122585 2.2523517367655375 0.8335703314304268 0.0257490862829168 11.863222113938873 0.14377929158810243 0.01212321329717049 6.295365698310351 0.00999999999999999 2.0000000000000004 1.253123348453279 ASLGS(ph)LEGEAEAEASS(ph)PKGK ddPTM_A549_MK2206_60min_R1 1 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.268)LGS(0.731)LEGEAEAEAS(0.476)S(0.524)PKGK 58.938 0.0010796 25195000.0 1564.2 1501.5 1510.8 1260.9 2155.7 1472.8 1565.0 1552.5 2758.2 2259.6 2136.9 True False 1828.198718981672 1577.919936574965 1725.0541577293427 1569.8205566039517 1838.5993856385232 1628.6507184344832 1849.340242311877 1772.5716293318474 2133.4721039403216 1749.1547906396436 1606.2487545602844 1.1381790733167898 0.9823633681240895 1.073964510684761 0.9773209486681874 1.1446542015479075 1.013946758751157 1.1513411213932052 1.1035473953205301 1.3282326899138148 1.088968807399001 1.0 10.64947962034423 -7.778001967803557 23.173163205609953 1.1540091574381999 1.0531631835716877 0.14585029083151435 0.0900454482134532 160.65128604630084 224770.97788593455 0.019291865051729494 0.026708113351495952 1.6672396582124762e-08 7.778001967803557 -0.10084597386651217 ASLGS(ph)LEGEAEAEASS(ph)PKGK ddPTM_A549_PD325901_60min_R1 2 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(0.002)LGS(0.998)LEGEAEAEAS(0.18)S(0.82)PKGK;AS(0.026)LGS(0.974)LEGEAEAEAS(0.195)S(0.805)PKGK 133.76 1.7928e-17 135928000.0 5449.4 6614.2 6559.9 5755.8 7075.1 7106.8 6510.0 7718.0 7247.700000000001 7209.4 7758.4 True False 6002.6190763637505 7171.601846536922 7005.094261883237 6111.322693629763 6578.169383769955 7048.924577052034 6757.74161240869 7564.058435346133 6943.104373555673 6754.197253636102 6804.165984549733 0.8821976256890175 1.054001601786542 1.0295301845648317 0.898173664120891 0.9667855544246053 1.0359718726818357 0.9931770664844951 1.111680469365664 1.0204196060650825 0.9926561563860882 1.0 12.732202619985243 -7.250889268329972 23.568029712556246 1.0186437220967541 0.9707650696336004 0.21331511132350955 0.05571187922387445 495.52379382314996 1106951.9422465654 0.007950285727600181 0.013659725232501238 5.611910441640971e-08 7.250889268329972 -0.047878652463153704 ASLGS(ph)LEGEAEAEASSPK ddPTM_A549_MK2206_60min_R1 4 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AS(0.175)LGS(0.825)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;AS(0.005)LGS(0.995)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK 436.22 0.0 469399100.0 48752.21 51898.72 51521.100000000006 47937.14 73638.85 58315.96 51964.82 56527.950000000004 83503.49 81584.14 85484.2 True False 56980.391170902345 54540.14317064399 58827.56669697459 59681.74145197998 62806.672713794804 64486.9161801987 61406.15515047485 64540.9600220864 64590.08284267269 63154.22611135391 64256.113896102834 0.8867699541095067 0.8487930542894515 0.9155170322328271 0.9288103159876855 0.9774427506672492 1.0035919116501357 0.9556468859875942 1.0044329809058192 1.0051974656778941 0.9828516273715122 1.0 15.971546111178068 -6.431838848858955 0.9777453064085657 1.0004116716928406 0.8611451864561706 0.8667553069240553 0.018680341369073917 0.1325106427276359 0.2202915702171383 0.002649778377299332 0.012510261497317614 3.6996543524723577e-07 6.431838848858955 -0.13926648523667007 ASLGS(ph)LEGEAEAEASSPK ddPTM_A549_PD325901_60min_R1 4 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGS(1)LEGEAEAEASSPK;AS(0.005)LGS(0.995)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;AS(0.007)LGS(0.993)LEGEAEAEASSPK 425.24 0.0 910360000.0 31347.219999999998 32480.47 33415.37 31685.18 36277.12 34008.07 35406.94 34511.37 33407.3 32007.79 34050.78 True False 34529.566697796334 35217.71319711938 35683.13795114337 33642.30160633515 33729.1402404699 33731.11955325966 36754.37047712102 33823.01365170397 32003.307358015136 29986.812676916386 29862.74992567878 1.1562755199615622 1.1793191613219753 1.1949046233166785 1.1265640870336044 1.1294720119350574 1.1295382922607036 1.230776488052635 1.1326155071412156 1.0716798499020916 1.0041544315760058 1.0 14.866059402405307 -9.07073945121509 1.096787724388472 1.0192238235258524 1.163181780848271 0.7774376634612035 0.03279037516181523 0.14870085146817363 0.36895258816040355 0.00822065969552881 0.007541196657615629 8.496900816102194e-10 9.07073945121509 0.14395795732241856 ASLGSLEGEAEAEAS(ph)SPKGK ddPTM_A549_MK2206_60min_R1 2 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.662)S(0.338)PKGK;ASLGSLEGEAEAEAS(0.5)S(0.5)PKGK 189.78 1.4102999999999998e-44 488840000.0 8485.4 10817.6 8819.2 8924.5 11303.1 8646.4 9180.3 7634.2 12543.599999999999 14600.6 15932.400000000001 True False 9917.528071887911 11368.169634294602 10069.895173316534 11111.002900636027 9640.428963126036 9561.356308984188 10848.24167827204 8716.371228756963 9702.494628013132 11302.314319442901 11975.945368129664 0.828120684174161 0.9492502917178904 0.8408434460726998 0.9277766856055124 0.8049827104907397 0.7983800873398129 0.9058359356866587 0.7278232290498697 0.810165237880374 0.943751325846941 1.0 13.547851924786858 -10.772403289380392 1.0576192493876244 0.998691553848015 0.8439172398502472 0.3753572559964625 0.06254929674211121 0.3573056028123283 0.7191195294148396 0.0401214247981213 0.010516240259568 1.688871903094516e-11 10.772403289380392 -0.15477431399776775 ASLGSLEGEAEAEAS(ph)SPKGK ddPTM_A549_PD325901_60min_R1 1 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.91)S(0.09)PKGK 219.78 8.189499999999998e-68 1189200000.0 6064.6 5376.1 5948.7 6907.1 7350.8 7720.8 6232.5 7678.1 7047.8 8150.3 8127.4 True False 6680.273727477448 5829.162814424592 6352.414554439062 7333.735879837747 6834.50516688332 7657.924364623078 6469.681198054861 7524.954272147074 6751.605475384695 7635.688667061101 7127.781323833454 0.9372164245752523 0.8178088734194724 0.8912190576327355 1.0288946232561365 0.9588544957223233 1.0743770069119494 0.9076711116854727 1.0557218200543803 0.9472239913995503 1.0712574250179838 1.0 12.799237361159912 -6.1453565694414625 5.837716754818071 0.9842345289006127 0.8725434220104128 0.4366396064695295 0.058925929675825654 0.14410091057589114 6.403011611682384 0.0066998413630165446 0.018100437960556215 7.155556752360189e-07 6.1453565694414625 -0.1116911068901999 ASLGSLEGEAEAEASS(ph)PK ddPTM_A549_MK2206_60min_R1 8 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.158)S(0.842)PK;ASLGSLEGEAEAEAS(0.285)S(0.715)PK;ASLGSLEGEAEAEAS(0.019)S(0.981)PK;ASLGSLEGEAEAEAS(0.01)S(0.99)PK;ASLGSLEGEAEAEAS(0.003)S(0.997)PK;ASLGSLEGEAEAEAS(0.211)S(0.789)PK;ASLGSLEGEAEAEAS(0.158)S(0.842)PK;ASLGSLEGEAEAEAS(0.056)S(0.944)PK 368.64 5.222799999999998e-247 573180000.0 14062.230000000001 14868.359999999999 14599.36 13529.81 22247.34 17410.63 16112.88 17453.190000000002 25036.38 18887.510000000002 20077.81 True False 16435.59063548499 15625.09601609974 16669.768776931065 16844.614057376242 18974.785756873087 19253.011310359154 19040.381727503 19927.2331306527 19365.67990488341 14620.808373054606 15091.935657633961 1.0890313216496763 1.0353275001007634 1.104548094763377 1.1161334397059746 1.2572797941445677 1.275715173130916 1.2616262194221453 1.3203894836758663 1.2831806564910486 0.9687828456689023 1.0 13.881490234093818 -6.395271300160566 2.88734451595177 1.1788097803221784 1.070044555330358 0.17718961846062942 0.10994915441769454 0.47805575847351534 7.614637485595575 0.01882592823528799 0.048635495728577394 4.024655388962071e-07 6.395271300160566 -0.10876522499182051 ASLGSLEGEAEAEASS(ph)PK ddPTM_A549_PD325901_60min_R1 4 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.159)S(0.841)PK;ASLGSLEGEAEAEAS(0.061)S(0.939)PK;ASLGSLEGEAEAEAS(0.022)S(0.978)PK;ASLGSLEGEAEAEAS(0.009)S(0.991)PK 345.74 1.0181999999999998e-219 677186000.0 12132.7 12822.9 12845.3 10491.3 14972.099999999999 11794.1 12698.899999999998 11439.9 12624.0 13770.300000000001 13793.3 True False 13364.402772378333 13903.530784971463 13717.059303063885 11139.323773528953 13920.511346940972 11698.052759921391 13182.163588604708 11211.722220072064 12093.45718114254 12900.840907945894 12096.811542932794 1.1047872180984826 1.1493549962009775 1.1339400679576324 0.9208479221152103 1.1507587183230628 0.9670360423822287 1.0897221587539734 0.9268328418840404 0.9997227069481616 1.066466222290024 1.0 13.56233921404337 -6.111664096743731 0.6191345835716644 0.9978326439691729 1.1665533771851253 0.2557718269249203 0.07148628604352604 1.2159627990293533 0.5576360989107506 0.011112147743061001 0.11914424032624274 7.73278442848099e-07 6.111664096743731 0.16872073321595238 ASLGSLEGEAEAEASS(ph)PKGK ddPTM_A549_MK2206_60min_R1 2 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.157)S(0.843)PKGK;ASLGSLEGEAEAEAS(0.17)S(0.83)PKGK 180.44 2.9527999999999995e-36 446420000.0 14288.4 15333.7 16412.2 14707.6 18340.4 12913.2 13323.599999999999 12373.7 21354.6 22228.8 22734.8 True False 16699.932602159377 16114.119834471892 18739.696748401842 18310.962660249264 15642.551455380966 14279.666252911582 15744.32565652814 14127.70986786698 16517.8171962889 17207.298641427926 17089.12171144048 0.9772259150673287 0.9429460510942548 1.0965863000353242 1.0714981711430385 0.9153513983640779 0.8355997747591627 0.9213068946655081 0.8267077797455821 0.9665691119298943 1.0069153308158798 1.0 14.060790631735541 -6.768254368644264 24.998002750000186 0.9515145393991449 1.0217358344196377 0.26441314485071643 0.06950985591832433 234.40351952023622 859816.4437489164 0.011316766653472931 0.021719690084576 1.705083419831853e-07 6.768254368644264 0.07022129502049279 ASLGSLEGEAEAEASS(ph)PKGK ddPTM_A549_PD325901_60min_R1 3 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.192)S(0.808)PKGK;ASLGSLEGEAEAEAS(0.249)S(0.751)PKGK;ASLGSLEGEAEAEAS(0.163)S(0.837)PKGK 175.86 3.3044e-35 1004039300.0 5922.23 6553.39 6310.93 6423.030000000001 7286.63 7688.16 6993.04 7937.93 7520.38 7290.150000000001 8316.42 True False 6523.450429884697 7105.667174424201 6739.227660505005 6819.765975340483 6774.842246308838 7625.550173961321 7259.163963938322 7779.60175896438 7204.3245814259135 6829.848684855216 7293.5530621299595 0.8944132406132976 0.9742394569415953 0.9239978928098628 0.9350402906850019 0.9288809155973097 1.0455192563903013 0.9952850006164766 1.066640866624816 0.9877661161927588 0.936422704637275 1.0 12.832406080880626 -7.240457584607887 24.781994785385876 1.0034177360511352 0.9334996055396615 0.5172275155820247 0.035525024810608846 398.3815316224675 470536.0438582868 0.004218505517779146 0.00730246018989729 5.7483395729104146e-08 7.240457584607887 -0.06991813051147366 ASLKS(ph)PALR ddPTM_A549_MK2206_60min_R1 2 ASLKSPALR 9 1 Q9ULD2 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 1 AS(0.076)LKS(0.924)PALR;AS(0.014)LKS(0.986)PALR 57.175 0.0039136 24826000.0 4562.4 5205.4 4002.4 4019.1000000000004 5440.1 4273.3 4641.799999999999 4401.700000000001 6233.5 6237.9 6273.6 True False 5332.421580029395 5470.332625938949 4570.000503637752 5003.779680424254 4639.868496456895 4725.497769613035 5485.154975567588 5025.654454640896 4821.622202854038 4828.754057590299 4715.6919774483595 1.1307824186843403 1.16002755313525 0.9691049639146618 1.0610912893279723 0.983921027634105 1.0020793962395274 1.16317075029476 1.0657300092276714 1.0224633470362916 1.023975713571334 1.0 12.203253771189972 -5.749633997444458 24.999380907128693 1.0235937501790537 1.1454050518321326 0.4134978653981287 0.051039050600213014 149.38561052966733 316336.77196989657 0.007099397890702415 0.02705128243850333 1.779778690290776e-06 5.749633997444458 0.12181130165307885 ASLKS(ph)PALR ddPTM_A549_PD325901_60min_R1 2 ASLKSPALR 9 1 Q9ULD2 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 1 AS(0.007)LKS(0.993)PALR;AS(0.004)LKS(0.996)PALR 81.709 0.00043816 68673000.0 6483.5 6615.0 7620.1 6982.2 7322.0 6550.6 6409.5 6743.299999999999 7534.2 7302.1 8648.3 True False 7141.700147099564 7172.469265344519 8137.245809383749 7413.474636273272 6807.727979528715 6497.254085444508 6653.417029912981 6608.7995914834855 7217.563774886264 6841.044159815818 7584.613926090617 0.9416036487411105 0.9456604298172192 1.0728622298614452 0.9774359919324785 0.8975707987074384 0.8566360989178822 0.8772255377463085 0.8713429128870505 0.9516059545309588 0.901963399387151 1.0 12.888860030580647 -4.181620433957164 14.02354294894327 0.9551271809930973 0.9438609873887575 0.0 0.06437516931578868 0.0 0.0 0.009092692691852724 0.0 6.582328704467726e-05 4.181620433957164 -0.011266193604339891 ASLKS(ph)PALRR ddPTM_A549_MK2206_60min_R1 2 ASLKSPALRR 10 2 Q9ULD2 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 1 AS(0.021)LKS(0.979)PALRR;AS(0.006)LKS(0.994)PALRR 65.295 0.0011569 7522100.0 2359.8 2373.01 2092.66 2071.1 3144.2 2647.0 2781.1000000000004 2228.3 3935.6 3557.3 3645.0 True False 2758.076548429194 2493.786073054786 2389.43065509259 2578.5195929752126 2681.6923450965555 2927.103783063607 3286.3898708585066 2544.168348882547 3044.1928838617705 2753.703459347854 2739.8459031177113 1.0066538943999508 0.9101920915395533 0.8721040305126727 0.9411184731378787 0.9787748800197187 1.0683461357198272 1.1994798200580825 0.9285808176246336 1.1110817876281796 1.0050577867223751 1.0 11.419879038775045 -7.029975002329529 2.983549452158807 1.0563620257805524 0.9271980055998009 0.3828119788558467 0.07116864360812034 0.20254180366811586 3.6373472376325213 0.010730855827256814 0.02043048525371825 9.333080197730946e-08 7.029975002329529 -0.12916402018075146 ASLKS(ph)PALRR ddPTM_A549_PD325901_60min_R1 1 ASLKSPALRR 10 2 Q9ULD2 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 1 AS(0.014)LKS(0.986)PALRR 73.848 0.00034038 3526200.0 1430.5 1229.3 1233.6 1341.2 1376.1 1498.2 1405.7 1338.3 1730.5 1434.9 1874.1 True False 1575.723306921558 1332.8974252287258 1317.319514239418 1424.0428779137976 1279.4474832872806 1485.9991559266275 1459.1946827285556 1311.6065566239595 1657.7731029758531 1344.3001691184334 1643.5975808987223 0.9587038367749054 0.8109633651930145 0.8014854302225883 0.8664182123796558 0.7784432747751285 0.9041137400032436 0.8878053239349897 0.7980095443476928 1.0086246914949701 0.8179010390021184 1.0 10.682641396875582 -8.772141680610606 24.999313768237545 1.0040727879449844 0.8489019181708289 0.09655648662564043 0.07559729015165734 83.76508685226129 195664.73750774303 0.008224588236346848 0.008799183776072046 1.689889546233291e-09 8.772141680610606 -0.1551708697741555 ASLLHSMPTHS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 ASLLHSMPTHSSPR 14 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 ASLLHS(0.007)MPT(0.162)HS(0.498)S(0.334)PR 67.685 0.00088679 5192100.0 1621.3 1598.7 1738.7 1809.3 2461.1 1873.5 1541.3 1837.7 2130.9 1939.4 2173.7 True False 1785.8931824620215 1733.4280596381373 1856.6986376524612 1921.0563517815638 2288.2408263340785 1858.2428371569451 1599.9550149317226 1801.045631852239 2041.3456834043611 1816.9459530199247 1906.3486802196012 0.9368135016393203 0.9092922389404942 0.9739554242713769 1.0077151004507048 1.2003264932994762 0.974765454210027 0.8392772169818463 0.9447619160859745 1.0708144342037202 0.9531026364026031 1.0 10.896596303813793 -6.0221080407491066 3.068932932160345 1.0200324877005928 0.9238715522983598 0.06458650370523433 0.08580010957866423 0.36238618842645476 6.8838069959144015 0.01245592548303546 0.04157182012105325 9.503683382456085e-07 6.0221080407491066 -0.09616093540223303 ASLMRT(ph)PPR ddPTM_A549_PD325901_60min_R1 1 ASLMRTPPR 9 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 AS(0.003)LMRT(0.997)PPR 48.74100000000001 0.027852999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASLPGVK ddPTM_A549_PD325901_60min_R1 1 ASLPGVK 7 0 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 0 88.029 0.035552999999999994 5175200.0 5222.3 4185.1 5252.9 5040.9 5854.6 5533.8 4604.4 5163.5 5952.3 5412.9 6147.7 False True 5752.4640515459305 4537.793064609725 5609.393382253765 5352.2649442854645 5443.393093273535 5488.734567525539 4779.62296162436 5060.509941812613 5702.14553068083 5071.128570228704 5391.571873481176 1.0669363566940149 0.8416456593909427 1.0404003718922785 0.992709560380889 1.0096115235052776 1.0180212183616182 0.8864989791072377 0.9385963983347946 1.0576035457724735 0.940565884908519 1.0 12.396490226187808 -8.763602118203927 24.999780508505143 1.0272016736787466 0.9724049176871327 0.0 0.06890562319995881 84.60275326434393 977946.8577353716 0.01063438163111176 0.011597398098563248 1.7234467992444014e-09 8.763602118203927 -0.05479675599161393 ASLPQAATFGELSGPLKPGS(ph)PYRPPVPR ddPTM_A549_MK2206_60min_R1 2 ASLPQAATFGELSGPLKPGSPYRPPVPR 28 2 Q14687-2;Q14687-3;Q14687;H0Y613 Q14687-2 GSE1 Genetic suppressor element 1 1 ASLPQAATFGELS(0.003)GPLKPGS(0.997)PYRPPVPR;ASLPQAATFGELS(0.001)GPLKPGS(0.999)PYRPPVPR 162.81 1.4784e-46 26323000.0 3037.3 2944.1 3660.6 3008.7 3970.6 3442.0 3305.3 3070.9 4713.700000000001 5193.299999999999 4670.2 True False 3549.9219851445027 3093.9421147321723 4179.728124029673 3745.8316350656755 3386.529999822013 3806.230155385317 3905.830225503801 3506.209479236824 3646.054476232146 4020.129923096505 3510.460449037129 1.011241128245213 0.8813493727242527 1.1906495414799831 1.0670485223934387 0.9646968108559354 1.0842538210135122 1.1126261874208316 0.9987890563468758 1.0386257099783616 1.1451859325745064 1.0 11.77744455848963 -2.0048619598672683 24.55517821420836 1.0283329410956945 0.0005621163929581119 0.0 0.08499202480124021 0.0 0.0 0.00951160657667502 0.0 0.009888673553607502 2.0048619598672683 -1.0277708247027364 ASLPQAATFGELSGPLKPGS(ph)PYRPPVPR ddPTM_A549_PD325901_60min_R1 2 ASLPQAATFGELSGPLKPGSPYRPPVPR 28 2 Q14687-2;Q14687-3;Q14687;H0Y613 Q14687-2 GSE1 Genetic suppressor element 1 1 ASLPQAATFGELS(0.002)GPLKPGS(0.998)PYRPPVPR;ASLPQAATFGELS(0.012)GPLKPGS(0.988)PYRPPVPR 162.58 1.5531e-46 45300000.0 4872.0 4426.9 5419.200000000001 4983.1 5611.700000000001 6024.5 4770.3 5011.299999999999 5420.7 5267.4 5596.8 True False 5366.601853423163 4799.970399206902 5786.979500296903 5290.89476955879 5217.553551314026 5975.438469416609 4951.836376908322 4911.345690211204 5192.886829992031 4934.815465059891 4908.429081038348 1.0933440750228567 0.9779035858437007 1.1789881049015183 1.0779201822428153 1.0629782900337401 1.2173830711948561 1.0088434191781765 1.0005942041994909 1.0579529100364444 1.0053757288912404 1.0 12.261045655510564 -8.920342791563787 0.5480593140331393 1.0111229383890223 1.0904489226282208 0.19466375167590566 0.06616838878603039 0.9651992700082787 0.6669732368293736 0.024919098626487578 0.021541452351545316 1.201315853600106e-09 8.920342791563787 0.07932598423919845 ASLS(ph)DIGFGK ddPTM_A549_PD325901_60min_R1 2 ASLSDIGFGK 10 0 Q07002;Q07002-3;D6R9B0;A0A0A0MSJ6;D6RA44 Q07002 CDK18 Cyclin-dependent kinase 18 1 AS(0.03)LS(0.97)DIGFGK;AS(0.026)LS(0.974)DIGFGK 73.499 0.0016817999999999998 2637700.0 2655.7 2339.1 2510.4 3173.9 3169.7 3936.2000000000003 2949.8999999999996 3222.1 3071.5 2722.3 2931.4 True False 2925.3047089769884 2536.224166072164 2680.770840261539 3369.944594550107 2947.0712068713697 3904.1448922429527 3062.160058747217 3157.832687811449 2942.4155364289713 2550.413513409376 2570.856383675641 1.137871694254107 0.9865289178254436 1.0427540244114102 1.310825690594191 1.1463383274089551 1.5186164878883912 1.1911050645190622 1.2283193677651443 1.1445273859374825 0.9920482254877896 1.0 11.328033303489388 -9.91746465870977 0.8942507298591401 1.0168825946716897 1.1931247838227896 0.2363863743075708 0.13310413050679398 0.6094147603923296 0.9968417574029623 0.05302405262367391 0.02779845387146361 1.2093035876247074e-10 9.91746465870977 0.1762421891510999 ASLS(ph)LIEK ddPTM_A549_MK2206_60min_R1 1 ASLSLIEK 8 0 P52292 P52292 KPNA2 Importin subunit alpha-1 1 AS(0.013)LS(0.987)LIEK 83.0 0.0034316000000000004 3420600.0 955.02 1297.1 865.16 936.94 1329.3 1101.2 1034.1 859.37 1517.5 1659.9 1469.9 True False 1116.204028002734 1363.1168496379548 987.8526973134221 1166.4903420608352 1133.7617309130624 1217.7282530825998 1221.982584392788 981.1883292102478 1173.7886729495472 1284.9274371493839 1104.8832628237917 1.0102461188071665 1.2337202449371762 0.8940787959704719 1.0557589035058708 1.026137121505004 1.1021329529152302 1.1059834332811969 0.8880470563945262 1.062364425676656 1.1629531194684282 1.0 10.10967823342635 ASLS(ph)LIEK ddPTM_A549_PD325901_60min_R1 2 ASLSLIEK 8 0 P52292 P52292 KPNA2 Importin subunit alpha-1 1 AS(0.232)LS(0.768)LIEK;AS(0.001)LS(0.999)LIEK 74.84100000000001 0.0049503 13017300.0 2533.0 2349.39 2266.49 2369.9 2693.8 2537.4 2238.8 2572.7 2732.6 2688.8999999999996 2618.2 True False 2790.1482953039563 2547.3813404849225 2420.3076409115592 2516.2833405665906 2504.596781105498 2516.7362556722896 2323.9987591183685 2521.3854802558944 2617.7583248724745 2519.1223951094557 2296.1779981372592 1.2151271798473042 1.1094006399118224 1.0540592423039497 1.0958572648147873 1.0907676944632845 1.0960545121998186 1.0121161168705903 1.0980792788282665 1.1400502604746203 1.0970936909738953 1.0 11.16501876773679 -10.944792882958502 1.1639532099169785 0.9991316908685801 1.1006646777899145 0.020006265572702575 0.05515951701444962 0.4311905455744411 1.023578457928027 0.03562740587099504 0.008036239248938561 1.1355522366580923e-11 10.944792882958502 0.10153298692133439 ASLSDLS(ph)SLDDVEGMSVR ddPTM_A549_PD325901_60min_R1 1 ASLSDLSSLDDVEGMSVR 18 0 A0A087WTM5;H7BYJ1;Q969K3;Q969K3-2 A0A087WTM5 RNF34 E3 ubiquitin-protein ligase RNF34 1 AS(0.145)LS(0.024)DLS(0.416)S(0.416)LDDVEGMSVR 46.926 0.0081207 1526600.0 1185.4 911.57 863.14 760.45 1412.5 900.95 842.56 727.0 1081.1 1073.3 1129.5 True False 1305.7409353546418 988.391203055193 921.7178708824671 807.421269392743 1313.2908728604634 893.6129619090202 874.6240818665234 712.499414679533 1035.6651266265212 1005.5316548294765 990.5786604904259 1.3181597660383497 0.9977917377766347 0.9304842791849902 0.8151006089642558 1.3257815105872217 0.9021120659580947 0.8829425837151644 0.7192759576778904 1.0455152810517576 1.0150952114511 1.0 9.952127731869359 ASLSLIEK ddPTM_A549_MK2206_60min_R1 1 ASLSLIEK 8 0 P52292 P52292 KPNA2 Importin subunit alpha-1 0 90.65700000000001 0.0072843000000000005 898770.0 1364.2 1235.8 1377.2 1421.7 1823.8 1647.0 1496.8 1343.7 2233.9 2143.5 2105.3 False True 1594.4436085122084 1298.6969414714238 1572.5076688011975 1770.016563822538 1555.5214359732506 1821.284446809882 1768.7491851069776 1534.173589908666 1727.9252168052662 1659.281861274596 1582.4959066759163 1.0075499101045946 0.820663697133586 0.9936883009727971 1.1184967723174177 0.9829544767927226 1.1508936226164077 1.1176958990196015 0.9694644917794745 1.0918986959244836 1.048522055744189 1.0 10.627986052608914 -5.994059842514256 24.52565658446325 1.0518256203048306 0.9123740429583814 0.4011571175015527 0.06868696328737128 89.39299021092963 369072.75333745556 0.009097190986457964 0.028158880266443375 1.0137716859960765e-06 5.994059842514256 -0.1394515773464492 ASLSLIEK ddPTM_A549_PD325901_60min_R1 2 ASLSLIEK 8 0 P52292 P52292 KPNA2 Importin subunit alpha-1 0 ; 112.84 0.0038978000000000003 3995600.0 5453.4 4547.2 4575.1 5435.5 6176.0 5711.0 5428.0 5435.3 5779.6 6105.799999999999 6234.9 False True 6007.025153419103 4930.4085023997895 4885.593798311252 5771.238490083841 5742.219066043338 5664.4915094760145 5634.565510315572 5326.888677589639 5536.7035111004025 5720.278745977655 5468.0468262875265 1.0985687109591762 0.9016763497153953 0.8934806071564451 1.055447890888338 1.0501407995333423 1.0359259328658423 1.0304530464566453 0.974184904924502 1.0125559796750112 1.0461283393692842 1.0 12.416809882354329 -6.27674540340849 24.979955319138924 1.01348517823882 0.9582853264885931 0.16827032682596332 0.05540959939974145 991.109672582541 1617524.0849854024 0.0072501231496832136 0.016902719133675095 5.287551332243715e-07 6.27674540340849 -0.05519985175022679 ASLT(ph)PVK ddPTM_A549_MK2206_60min_R1 2 ASLTPVK 7 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 AS(0.071)LT(0.929)PVK;AS(0.026)LT(0.974)PVK 70.816 0.022234 9897100.0 5483.2 5042.8 4783.9 4487.9 7803.0 5851.799999999999 5223.9 5513.3 8815.2 7650.4 8716.1 True False 6408.630108630803 5299.456980459697 5462.328954965186 5587.435701469485 6655.1890365716 6471.033591889534 6173.015010743147 6294.827158773121 6818.5712749817785 5922.16932656644 6551.651817877715 0.978170129728713 0.8088734150979893 0.8337330961422498 0.8528285471799432 1.015803223610168 0.9876949770486589 0.9422074283463342 0.9608000140661034 1.0407407878995816 0.9039200328696368 1.0 12.67764297284238 -6.761354994892261 24.99999893916716 1.0066068039200435 0.8616729855343294 0.4157122744243429 0.05693646459343516 1.0284166223499662 304468.541038308 0.007017777527948347 0.013907378117480527 1.7323873551203605e-07 6.761354994892261 -0.14493381838571417 ASLT(ph)PVK ddPTM_A549_PD325901_60min_R1 1 ASLTPVK 7 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 AS(0.103)LT(0.897)PVK 86.744 0.01379 32913000.0 12853.0 12235.0 12892.0 12467.0 15079.0 12544.0 12798.0 13774.0 13598.0 13348.0 15693.0 True False 14157.827098121503 13266.086388736237 13766.92864589379 13237.0582753887 14019.903059725955 12441.84582294994 13285.034893334323 13499.26676450604 13026.523348318775 12505.205002016064 13762.860486123287 1.0286980030347943 0.9639047349286194 1.0002955896976944 0.9617955721294466 1.0186765370368926 0.9040159809434026 0.9652815202718401 0.9808474610432169 0.9464982487799727 0.9086196154225873 1.0 13.748492731875427 -5.255692515064909 23.910850479580265 0.9726927079841047 1.028698048705018 0.18716987527127915 0.03496430085124655 393.6565371172512 1637784.1012840644 0.00406227164178216 0.048392245751417436 5.550185326791007e-06 5.255692515064909 0.05600534072091323 ASLTGS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 ASLTGSPSR 9 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 ASLTGS(1)PSR;ASLTGS(1)PSR 153.1 1.7606e-05 37749000.0 3649.4 4561.2 4031.0 3943.1 5365.0 4504.8 3974.7000000000003 3923.5 6411.9 6146.599999999999 6459.3 True False 4265.329500736296 4793.345597539618 4602.656413692731 4909.159677012485 4575.815606972524 4981.494945955773 4696.851540649853 4479.668140214818 4959.614887700295 4758.078791000902 4855.277542389086 0.8784934462546706 0.987244406872981 0.9479697861778565 1.011097642545247 0.9424416147219773 1.025995919381486 0.9673703510548898 0.9226389431098421 1.0214894708696445 0.9799808042816114 1.0 12.245338051487575 -2.63736312751523 0.41791858797830234 1.0022314686250782 3.476069623781559e-62 0.28134441688830614 0.03670467642148346 28.988172427686134 0.5568884844196388 0.007614187724755756 22.890659900226716 0.0023048192496898535 2.63736312751523 -1.0022314686250782 ASLTGS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 ASLTGSPSR 9 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 ASLTGS(1)PSR;ASLTGS(0.999)PS(0.001)R 141.91 3.8577e-05 51606000.0 15008.4 15750.900000000001 15451.5 14585.8 16843.4 14317.9 13091.5 14788.3 15427.2 16822.7 19171.5 True False 16532.04171939988 17078.283620788367 16500.131707417622 15486.731739244757 15660.377690575528 14201.299769484618 13589.704196443681 14493.335755303075 14778.84843353314 15760.511851020054 16813.527038151566 0.9832584015172445 1.0157466415009797 0.981360524176586 0.9210876280808793 0.9314153809037552 0.844635378243985 0.8082601684707373 0.8620044873640286 0.8789856167595569 0.9373709522849004 1.0 14.037334775551377 -6.202728036945001 3.1545397064619287 0.9170280791056707 0.9997159755456339 0.36731048584910564 0.05188354873567575 0.32354785058070284 6.369805814406574 0.009844354801191698 0.028490601628708957 6.270063844899195e-07 6.202728036945001 0.0826878964399631 ASMS(ph)EFLESEDGEVEQQR ddPTM_A549_PD325901_60min_R1 1 ASMSEFLESEDGEVEQQR 18 0 J3QQW9;Q15022 J3QQW9 SUZ12 Polycomb protein SUZ12 1 AS(0.06)MS(0.47)EFLES(0.47)EDGEVEQQR 45.257 0.013857 7773700.0 1011.9 677.67 794.16 749.99 739.71 539.02 780.47 639.62 688.94 616.84 777.9 True False 1114.6273430785916 734.7796291830714 848.0564732720306 796.3151789491269 687.755321460965 534.6303998315115 810.1712129395712 626.8622773278167 659.9862476533857 577.8926171294272 682.2232315143889 1.6338161639619901 1.0770369510167788 1.2430776820506795 1.167235506157535 1.0081089146353108 0.7836590358331054 1.1875456236533684 0.9188521416022689 0.9674051207379117 0.8470726155816035 1.0 9.414100073163363 -2.0000000002221316 0.6097290690728732 0.9844631023128646 40.87245995760317 0.6771851399424617 0.1264192967109286 64.10878780887448 0.4392815085513874 0.018500867614170097 3426.9924944322875 0.00999999999488523 2.0000000002221316 39.887996855290304 ASMSEFLES(ph)EDGEVEQQR ddPTM_A549_MK2206_60min_R1 8 ASMSEFLESEDGEVEQQR 18 0 J3QQW9;Q15022 J3QQW9 SUZ12 Polycomb protein SUZ12 1 ASMS(0.001)EFLES(0.999)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;AS(0.003)MS(0.017)EFLES(0.98)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;AS(0.002)MS(0.046)EFLES(0.951)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR 287.03 1.1188999999999998e-116 79592300.0 13911.710000000001 14370.11 14102.460000000001 12956.220000000001 19567.93 14991.2 15065.9 15673.080000000002 22545.25 21473.800000000003 21230.5 True False 16259.666539345686 15101.487219297558 16102.400885101764 16130.494481626827 16689.513418480135 16577.558833646806 17803.179013831643 17894.787086794462 17438.786872366236 16622.853665798204 15958.380918008388 1.0188794604468496 0.9463044714176574 1.0090247229862057 1.010785151983947 1.045814954802006 1.0387995448172127 1.1156005803659865 1.1213410169073554 1.092766676141141 1.0416378548177143 1.0 13.9620266676981 -6.595748412809469 1.6044765645219174 1.0567698744049443 0.984866578436105 0.4337660718913954 0.03782340654569619 0.3913141645634004 1.9979976190901978 0.007301037280551948 0.020521170290647008 2.5365976582954347e-07 6.595748412809469 -0.07190329596883926 ASMSEFLES(ph)EDGEVEQQR ddPTM_A549_PD325901_60min_R1 5 ASMSEFLESEDGEVEQQR 18 0 J3QQW9;Q15022 J3QQW9 SUZ12 Polycomb protein SUZ12 1 ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR 248.1 2.4369999999999993e-86 95139900.0 13940.5 15374.4 16548.0 14300.199999999999 17971.4 16571.7 15010.899999999998 16037.5 15663.100000000002 17288.7 17516.3 True False 15355.729297546315 16670.054644461496 17671.04679120777 15183.490875889422 16709.150861964263 16436.74556952963 15582.14801377965 15717.619481324635 15004.834376897485 16197.088531492003 15361.906144974279 0.9995979113939591 1.0851553503283955 1.150316023574258 0.9883858638764548 1.0877003611580287 1.069967842168271 1.0143368841553184 1.0231555467787263 0.9767560246295599 1.0543671064408213 1.0 13.907069620040932 -8.061176995629939 1.5589856529067823 0.9897626860355264 1.066552422866977 0.15903238834502487 0.0466114185227382 0.27423519648948114 1.3233257558100726 0.007023241179787988 0.009805482726303865 8.686063587917695e-09 8.061176995629939 0.07678973683145052 ASNEKESAAPAS(ph)PAPSPAPSPTPAPPQK ddPTM_A549_MK2206_60min_R1 2 ASNEKESAAPASPAPSPAPSPTPAPPQK 28 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 ASNEKESAAPAS(1)PAPSPAPSPTPAPPQK;ASNEKES(0.001)AAPAS(0.989)PAPS(0.009)PAPSPTPAPPQK 124.17 1.9744e-21 16649700.0 1572.6599999999999 1836.3200000000002 1057.22 1345.32 1781.4 1153.91 1593.53 1521.14 2509.1 2499.5 2185.8 True False 1838.0865601545304 1929.7808444431182 1207.1496932979978 1674.923460393709 1519.35841980631 1276.0159902965338 1883.0537740135753 1736.7662532958748 1940.7928562093632 1934.861214021858 1643.0055349889421 1.1187342470924184 1.1745431182957677 0.7347204057386953 1.0194265477048328 0.9247433361912172 0.7766352353189862 1.1461031225474532 1.0570665870018288 1.1812454765847307 1.1776352378720867 1.0 10.682121625137322 ASNEKESAAPAS(ph)PAPSPAPSPTPAPPQK ddPTM_A549_PD325901_60min_R1 2 ASNEKESAAPASPAPSPAPSPTPAPPQK 28 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 ASNEKESAAPAS(0.995)PAPS(0.005)PAPSPTPAPPQK;ASNEKESAAPAS(0.995)PAPS(0.005)PAPSPTPAPPQK 138.11 3.1068e-28 27773000.0 2069.2 1864.29 1644.02 2140.4700000000003 2054.5 2221.2 2287.3999999999996 1901.9699999999998 2153.7 1988.25 2131.42 True False 2279.2636607354702 2021.400261026324 1755.5930834953697 2272.6819705399234 1910.1990076402267 2203.111283636513 2374.448258713307 1864.0337162834005 2063.187478693495 1862.7115556831325 1869.2688521845978 1.2193343178386111 1.0813855153387548 0.9391870417375349 1.2158133207450925 1.0218963448771932 1.1785951930145073 1.270255081786823 0.9971993670706709 1.1037403615227774 0.9964920527650146 1.0 10.86825836782692 -10.412422214186401 0.6066631414280363 0.99304472923157 1.1146949628953442 0.17835301270791237 0.09697264507778962 1.3781216602654107 0.8505330224823392 0.08665061959179288 0.02080241773420986 3.8688134214727505e-11 10.412422214186401 0.12165023366377425 ASNTST(ph)PTK ddPTM_A549_MK2206_60min_R1 1 ASNTSTPTK 9 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 ASNT(0.004)S(0.179)T(0.715)PT(0.102)K 83.397 0.0015222999999999999 5044800.0 1498.1 1767.2 1291.9 787.2 1590.7 1743.3 1620.5 1838.8 1425.1 2091.7 2046.3 True False 1750.9426549715142 1857.1429316785072 1475.110846154712 980.0640353387513 1356.710137187548 1927.774848891115 1914.9238739082427 2099.4555310888236 1102.3171254170672 1619.1835172512576 1538.1472349930787 1.1383452865481978 1.2073895719656929 0.9590179747398172 0.6371717954186364 0.882041787887525 1.2533096995098714 1.2449548589000061 1.3649249456267238 0.716652541667786 1.0526843467352094 1.0 10.586977892661176 -8.78982885146857 24.999957179537027 0.8661970699303447 1.0748453732997634 0.08876213272312294 0.20970220267052392 303.27781967872147 267067.1307377782 0.04020880418173663 0.04280950023027793 1.6224493528139552e-09 8.78982885146857 0.20864830336941864 ASNTST(ph)PTK ddPTM_A549_PD325901_60min_R1 2 ASNTSTPTK 9 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 ASNT(0.004)S(0.051)T(0.873)PT(0.072)K;AS(0.001)NT(0.167)S(0.346)T(0.401)PT(0.085)K 113.22 2.1484e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASNTSTPT(ph)K ddPTM_A549_MK2206_60min_R1 1 ASNTSTPTK 9 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 ASNT(0.015)S(0.127)T(0.077)PT(0.78)K 59.8 0.0090512 5579600.0 1361.2 1242.2 1013.0 1018.6 1613.6 1969.2 1757.0 1967.6 2124.4 1969.4 1959.0 True False 1590.9372818551658 1305.4226741348136 1156.6586323668405 1268.1570457266923 1376.2415775229945 2177.5794369508308 2076.2241570236224 2246.513325522283 1643.2267919696974 1524.5111721922979 1472.5262343505067 1.0804135401749817 0.886519128612063 0.7854927167915706 0.8612118522194232 0.9346126034420155 1.4788051894445906 1.4099743071398598 1.5256185411957446 1.1159236104845918 1.0353032337415167 1.0 10.524077621828333 -7.029668358171304 24.768734442255077 1.1535766043856326 0.8942966698641464 0.4031363312365581 0.1898692405960808 696.0485236318906 581097.8043648096 0.03308425350303708 0.05736535619023662 9.339672372504457e-08 7.029668358171304 -0.25927993452148623 ASPEAAS(ph)TPRDPIDVDLPEEAER ddPTM_A549_MK2206_60min_R1 1 ASPEAASTPRDPIDVDLPEEAER 23 1 P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;H3BT29 P29590-2 PML Protein PML 1 AS(0.024)PEAAS(0.585)T(0.391)PRDPIDVDLPEEAER 56.903 0.0010423 2464500.0 1082.4 990.75 753.38 926.97 1370.2 888.6 763.19 1030.6 1930.7 1628.4 1101.3 True False 1265.0826578607343 1041.174943164601 860.2206124901586 1154.077691613264 1168.6453950929647 982.6310621950583 901.8517441086274 1176.6907060801295 1493.3995326943589 1260.5433090270824 827.8168156662647 1.5282157041501243 1.2577359186967179 1.0391436803537433 1.3941220687627731 1.4117198068178713 1.1870151023740585 1.0894339508950128 1.421438516120351 1.804021740597771 1.5227321856376397 1.0 9.693167744494087 ASPEAAS(ph)TPRDPIDVDLPEEAER ddPTM_A549_PD325901_60min_R1 2 ASPEAASTPRDPIDVDLPEEAER 23 1 P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;H3BT29 P29590-2 PML Protein PML 1 AS(0.007)PEAAS(0.554)T(0.439)PRDPIDVDLPEEAER;AS(0.029)PEAAS(0.527)T(0.444)PRDPIDVDLPEEAER 69.952 9.714399999999999e-05 6553500.0 1942.51 1475.59 1240.27 1831.42 2051.67 1760.38 1860.2400000000002 1772.72 1547.88 1791.25 1715.73 True False 2139.7121851997185 1599.9431478835547 1324.442180549386 1944.542653943399 1907.567777077256 1746.0440489321293 1931.0324511623878 1737.3617089280629 1482.8279864976973 1678.1501693033626 1504.706086908578 1.422013377772507 1.0632927997059156 0.8801999221458958 1.2923072956649402 1.267734472315692 1.1603887723478148 1.283328663293772 1.1546186488136538 0.9854602167152594 1.115267748235887 1.0 10.555265998644286 -8.715055098993231 4.992824155460236 0.9928779390748661 1.1854794468702419 0.1914003486861391 0.13745854660313422 0.17909356196435877 9.845126032839321 0.02251480853235712 0.025220767294393383 1.927280383385115e-09 8.715055098993231 0.19260150779537577 ASPEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A549_MK2206_60min_R1 6 ASPEPQRENASPAPGTTAEEAMSR 24 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 AS(0.001)PEPQRENAS(0.96)PAPGT(0.017)T(0.017)AEEAMS(0.004)R;ASPEPQRENAS(0.941)PAPGT(0.029)T(0.029)AEEAMS(0.001)R;ASPEPQRENAS(0.896)PAPGT(0.048)T(0.048)AEEAMS(0.008)R;AS(0.001)PEPQRENAS(0.993)PAPGT(0.003)T(0.003)AEEAMSR;AS(0.002)PEPQRENAS(0.995)PAPGT(0.001)T(0.001)AEEAMSR;ASPEPQRENAS(0.969)PAPGT(0.015)T(0.015)AEEAMSR 85.93700000000001 7.494800000000001e-07 149341800.0 5329.98 6644.540000000001 6017.050000000001 5295.57 7584.069999999999 5136.119999999999 5629.5 4993.11 8903.6 8740.519999999999 8218.8 True False 6229.550318500144 6982.718704875013 6870.358167702765 6592.984887727172 6468.463349556778 5679.620809319473 6652.307280571707 5700.8986332580635 6886.948816127566 6766.030461445222 6177.845132659491 1.0083694532203973 1.1302838700116513 1.112096211570968 1.0671981485701256 1.0470420042355737 0.9193530571515737 1.0768005894812656 0.9227972716764903 1.1147817189070282 1.0952088173392789 1.0 12.592887990340397 -6.6515332707924815 3.5437637550466814 1.036183399541359 1.0881852384379698 0.12376305968272228 0.06604667610628949 0.4396049244795703 10.687395353782321 0.009934592664523121 0.02165311297735102 2.2308312995579402e-07 6.6515332707924815 0.05200183889661081 ASPEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A549_PD325901_60min_R1 6 ASPEPQRENASPAPGTTAEEAMSR 24 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 ASPEPQRENAS(0.9)PAPGT(0.049)T(0.049)AEEAMS(0.001)R;ASPEPQRENAS(0.98)PAPGT(0.01)T(0.01)AEEAMSR;ASPEPQRENAS(0.57)PAPGT(0.215)T(0.215)AEEAMSR;ASPEPQRENAS(0.848)PAPGT(0.076)T(0.076)AEEAMSR;ASPEPQRENAS(1)PAPGTTAEEAMSR;ASPEPQRENAS(1)PAPGTTAEEAMSR 115.92 2.6934e-16 203175000.0 8005.639999999999 9054.78 9698.650000000001 9616.57 9603.93 9929.54 8797.6 9326.98 9217.5 9965.699999999999 10996.900000000001 True False 8818.366679359326 9817.858088353172 10356.858711720282 10210.563688084916 8929.383088559847 9848.677118368501 9132.397482231438 9140.946067025734 8830.120529719688 9336.464001242994 9644.35101509267 0.914355633215678 1.0179905390200934 1.073878241834271 1.0587092560304125 0.925866662732002 1.0211860915219777 0.9469167461802184 0.9478031287663476 0.9155743622252266 0.9680759220223468 1.0 13.235468444781059 -6.763782257379523 24.99650665471576 0.9600300463981323 1.020476412177026 0.2407660719500624 0.04714446901933501 69.88787549749932 745656.2407725818 0.007369646676062926 0.014409685020118261 1.7227320862554538e-07 6.763782257379523 0.06044636577889373 ASPITNDGEDEFVPS(ph)DGLDKDEYTFSPGK ddPTM_A549_PD325901_60min_R1 2 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASPITNDGEDEFVPS(0.99)DGLDKDEY(0.002)T(0.003)FS(0.004)PGK;ASPITNDGEDEFVPS(0.988)DGLDKDEY(0.004)T(0.006)FS(0.002)PGK 68.444 0.00014654 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASPITNDGEDEFVPSDGLDKDEYT(ph)FSPGK ddPTM_A549_MK2206_60min_R1 1 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASPITNDGEDEFVPSDGLDKDEYT(0.553)FS(0.447)PGK 125.73 2.3327999999999997e-28 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASPLSSDS(ph)PVKTPIK ddPTM_A549_MK2206_60min_R1 2 ASPLSSDSPVKTPIK 15 1 Q9Y426-2;Q9Y426-3;Q9Y426 Q9Y426-2 C2CD2 C2 domain-containing protein 2 1 ASPLSS(0.002)DS(0.997)PVKTPIK;ASPLSS(0.003)DS(0.99)PVKT(0.007)PIK 145.91 3.4189e-14 14019300.0 7391.0 8220.3 8884.7 8373.9 11468.3 8646.7 8694.7 8881.400000000001 12489.0 12954.3 13216.5 True False 8638.420107399013 8638.678158259865 10144.684058232655 10425.505875918654 9781.328261965147 9561.688054785063 10274.414443980248 10140.365648146771 9660.261440834849 10027.914632847913 9934.478293156437 0.8695393811821766 0.8695653564627335 1.0211592152978 1.049426609860376 0.9845839885425297 0.9624751066567655 1.0342178160536102 1.0207245261316 0.972397458202663 1.0094052588303346 1.0 13.278228491327909 -5.754499626371458 24.999834494327565 0.9962057356656725 0.869552296350801 0.7972864717542696 0.02616296852758942 55.583014743350034 200227.34951422177 0.003839120134816599 0.014239970081021078 1.7599501779062165e-06 5.754499626371458 -0.1266534393148715 ASPLSSDS(ph)PVKTPIK ddPTM_A549_PD325901_60min_R1 4 ASPLSSDSPVKTPIK 15 1 Q9Y426-2;Q9Y426-3;Q9Y426 Q9Y426-2 C2CD2 C2 domain-containing protein 2 1 AS(0.018)PLS(0.151)S(0.137)DS(0.692)PVKT(0.002)PIK;AS(0.005)PLS(0.131)S(0.131)DS(0.7)PVKT(0.032)PIK;ASPLSSDS(1)PVKTPIK;ASPLS(0.005)S(0.03)DS(0.966)PVKTPIK 171.98 8.003899999999999e-28 26887200.0 12970.400000000001 13390.099999999999 15643.7 14486.5 17398.2 16417.300000000003 15333.0 15378.1 16905.5 15983.400000000001 17325.1 True False 14287.14545969619 14518.530719560036 16705.37555521011 15381.298203771421 16176.210452531606 16283.602951938477 15916.50570553955 15071.37173161394 16195.020625459865 14974.205396255891 15194.22253285761 0.9403011854538882 0.9555296882195594 1.0994557647872159 1.0123122897870727 1.0646290336705575 1.0716970161997479 1.0475366983154286 0.9919146372262216 1.065867015600043 0.9855196844638855 1.0 13.891235235608283 -5.633599085345154 8.039257069111594 1.0372222667611206 0.9442976459975718 0.4955713538931955 0.035033722330997094 0.13094059127616928 8.597559721710741 0.0046510237532390915 0.018168940550287567 2.324881997862143e-06 5.633599085345154 -0.0929246207635488 ASPRT(ph)PPR ddPTM_A549_PD325901_60min_R1 1 ASPRTPPR 8 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 AS(0.019)PRT(0.981)PPR 50.292 0.012514 17827000.0 983.02 775.45 735.59 715.76 751.91 944.71 679.78 699.75 874.7 1037.8 939.6 True False 1082.8154667389244 840.7998929420121 785.511560862009 759.9708695910971 699.0984355486801 937.0165949776027 705.649399889889 685.7929373067448 837.9394008511871 972.2731308879434 824.0351566151438 1.3140403756397507 1.0203446857725489 0.9532500580298338 0.9222553958896595 0.8483842345032203 1.1371075462684725 0.8563340947593264 0.832237474094854 1.0168733628952886 1.1798927789461202 1.0 9.68656207960111 -5.2644321009816695 3.4560345071835252 0.9759295450631513 1.3550868207501174 0.45842050800104106 0.1063882522762334 0.16916195509551815 3.438375939356095 0.01197902190005287 0.16682676751580883 5.439611697393097e-06 5.2644321009816695 0.3791572756869661 ASPS(ph)PQPSSQPLQIHR ddPTM_A549_MK2206_60min_R1 3 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.021)PS(0.979)PQPSSQPLQIHR;AS(0.006)PS(0.979)PQPS(0.011)S(0.004)QPLQIHR;AS(0.003)PS(0.997)PQPSSQPLQIHR 187.56 9.6316e-35 275046300.0 5335.51 5990.0 5280.3 5436.7 8522.6 6610.9 3271.1 6165.3 8172.7 9355.6 9986.0 True False 6236.013647304629 6294.865414641387 6029.125939276043 6768.69174406274 7268.936829819953 7310.461050039738 3865.416528195772 7039.250155439376 6321.596499120107 7242.163462253613 7506.200600420703 0.830781640308829 0.8386220605786336 0.803219399563892 0.9017467163991557 0.968390963254106 0.9739229523961838 0.5149631263490514 0.9377913714489383 0.8421832609650477 0.9648241297798128 1.0 12.873867130890838 -10.575655755533898 0.7903834843225919 1.0036172978613351 0.8457645897315045 0.16231684012903602 0.11894393577413438 0.9239094325410228 0.9964499669401565 0.08814420171290732 0.02229073739933149 2.656710575012008e-11 10.575655755533898 -0.15785270812983065 ASPS(ph)PQPSSQPLQIHR ddPTM_A549_PD325901_60min_R1 4 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.003)PS(0.997)PQPSSQPLQIHR;ASPS(1)PQPSSQPLQIHR;AS(0.003)PS(0.997)PQPSSQPLQIHR;AS(0.002)PS(0.998)PQPSSQPLQIHR 270.51 1.2609999999999997e-91 997975000.0 13039.5 12550.33 15104.6 17294.6 16867.76 17114.6 14207.0 17281.9 15611.7 15697.1 19749.5 True False 14363.260440827453 13607.990354486968 16129.688987338459 18362.84816311361 15683.026728212964 16975.22437192755 14747.655159368695 16937.198947111723 14955.59454014916 14705.982427116163 17320.436702395466 0.829266645386659 0.7856609269329188 0.9312518653243701 1.060183901747349 0.9054637015037824 0.9800690746775356 0.8514597762612447 0.9778736667054856 0.8634652114793826 0.8490537900284167 1.0 14.080187684928044 -14.373568689053966 0.010849159408237634 1.990020880378552 5.074346772246635e-07 0.005059163634331565 0.08063046210251683 12088.253617710483 11.31474997875165 1197.2939422049355 898.1002195687068 4.230885877215431e-15 14.373568689053966 -1.9900203729438748 ASPS(ph)PQPSSQPLQIHRQT(ph)PESK ddPTM_A549_PD325901_60min_R1 2 ASPSPQPSSQPLQIHRQTPESK 22 1 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 2 AS(0.133)PS(0.867)PQPSSQPLQIHRQT(0.949)PES(0.051)K;AS(0.151)PS(0.847)PQPS(0.002)SQPLQIHRQT(0.95)PES(0.05)K 121.09 1.5706e-14 46610000.0 6120.8 6498.3 6062.4 6328.0 7581.1 7681.6 6556.200000000001 7687.1 7189.1 7699.5 8189.0 True False 6742.179110105189 7045.934546785831 6473.830920172703 6718.866188069273 7048.629689375193 7619.043596426366 6805.6997786902975 7533.7747600867115 6886.967127768685 7213.352255995109 7181.804914348032 0.9387861673373297 0.9810813062757031 0.9014211604716641 0.9355400582722756 0.9814565799877442 1.0608814479497772 0.947630833732849 1.0490085500701227 0.9589465614708761 1.004392675939171 1.0 12.810130749008959 -6.805983927360352 5.898040629696159 0.9893002683609952 0.9394616666239906 0.3681446359941172 0.03682155481324868 0.18471329171774542 15.28713382082978 0.005235401034848811 0.010128226749809946 1.5632054936492661e-07 6.805983927360352 -0.049838601737004606 ASPSCS(ph)SPTRDSSGVPVSK ddPTM_A549_MK2206_60min_R1 2 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;J3KN91;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.003)CS(0.502)S(0.406)PT(0.089)RDSSGVPVSK;AS(0.002)PS(0.074)CS(0.526)S(0.394)PT(0.003)RDSSGVPVSK 147.17 7.1008e-21 181743600.0 8564.4 11880.1 10127.300000000001 9642.6 11470.300000000001 9693.9 7906.799999999999 7881.1 13281.7 14552.5 13610.6 True False 10009.861340523346 12484.746345990177 11563.503423068818 12005.03743287277 9783.03406461453 10719.702063709963 9343.363212723038 8998.270059856508 10273.41615651663 11265.080142849802 10230.712386549769 0.978412935709465 1.2203203329617367 1.130273531906855 1.1734312313046442 0.9562417254028374 1.0477962490474333 0.9132661401963248 0.8795350431008556 1.0041740758955362 1.1011041770326675 1.0 13.320618986094985 -6.7638953107975635 24.999811068474543 0.9866586165217176 1.1327077200398734 0.4198561038539125 0.07877164088584031 39.96055167043354 406778.89914020454 0.009777243351239733 0.019117684170463424 1.7222836914186564e-07 6.7638953107975635 0.1460491035181558 ASPSCS(ph)SPTRDSSGVPVSK ddPTM_A549_PD325901_60min_R1 1 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;J3KN91;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.011)CS(0.731)S(0.258)PT(0.001)RDSSGVPVSK 212.69 2.668e-66 19640000.0 2807.3 2881.7 3237.2 2177.5 3077.0 4371.1 3405.5 3981.8 2701.6 3266.9 3388.2 True False 3092.2950293749695 3124.550972327028 3456.8958588649843 2311.9992295386915 2860.8821350737303 4335.503210833588 3535.098166061105 3902.379875338328 2588.0611470670715 3060.6273764673597 2971.4728795694205 1.040660694107717 1.0515158976580627 1.1633610667063883 0.7780650617527125 0.9627825159515792 1.459041824222142 1.1896787584254702 1.313281336730154 0.870969129437955 1.0300034698317213 1.0 11.536962498291357 -8.793722226196465 24.999896619216795 0.9390687437420674 1.1159870730618768 0.12865946380362348 0.17278450740466073 253.18068850101704 196062.45567354368 0.031291890923137965 0.03331396465464071 1.6079693778921239e-09 8.793722226196465 0.17691832931980944 ASPSCSS(ph)PTR ddPTM_A549_MK2206_60min_R1 4 ASPSCSSPTR 10 0 Q8N5I9;J3KN91;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPSCS(0.002)S(0.998)PTR;ASPSCS(0.103)S(0.896)PT(0.001)R;ASPSCS(0.007)S(0.985)PT(0.008)R;ASPSCS(0.002)S(0.997)PTR 161.51 8.0745e-09 406592000.0 8029.0 8348.900000000001 6781.5 6613.4 9223.5 8332.800000000001 7353.799999999999 7719.7 10227.2 10143.7 10334.8 True False 9384.098909796601 8773.823348964861 7743.218672651264 8233.683296886802 7866.735368296565 9214.571365135023 8689.890270870977 8813.991115589728 7910.755529482444 7852.2311248943915 7768.383934030425 1.207985983891492 1.1294271013730381 0.9967605538561346 1.059896545640345 1.0126604754735793 1.1861632282062404 1.1186226562263193 1.1345977735444928 1.0183270544634568 1.0107933891496612 1.0 12.923398788976595 -8.838907522964314 6.604722457522529 1.008179017753422 1.1012973463432936 0.32575516824266837 0.061360116029451045 0.1903338990839909 13.111406457402374 0.01098244055269501 0.011670924867143884 1.449080382428724e-09 8.838907522964314 0.09311832858987157 ASPSCSS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 ASPSCSSPTR 10 0 Q8N5I9;J3KN91;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPSCS(0.052)S(0.915)PT(0.033)R;ASPSCS(0.005)S(0.953)PT(0.042)R;ASPSCS(0.02)S(0.968)PT(0.012)R;ASPSCS(0.002)S(0.976)PT(0.022)R 155.53 4.4428000000000004e-09 468634000.0 9004.0 8482.8 8183.8 7209.1 7772.4 5994.6 8123.9 8031.0 5620.3 7158.9 8941.2 True False 9918.079451605536 9197.675326389191 8739.201881187217 7654.389733945985 7226.4934373243605 5945.781965103295 8433.05946006865 7870.8154048023835 5384.0983361197295 6706.885832254479 7841.489082936699 1.2648209219837538 1.1729500901051553 1.1144824393371875 0.9761398189792999 0.9215715740839854 0.7582465399386303 1.0754410764173894 1.0037398919459697 0.6866168248369662 0.855307679615196 1.0 12.93691192989251 -6.08663671916406 0.9997130668334689 0.8710118420371231 1.2801093913871877 0.5830430129904691 0.10672897008599701 0.4764039094253086 0.7246661270430519 0.021163207574951118 0.15230949290687254 8.191497081064247e-07 6.08663671916406 0.4090975493500646 ASPSCSS(ph)PTRDSSGVPVSK ddPTM_A549_MK2206_60min_R1 2 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;J3KN91;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPSCS(0.162)S(0.79)PT(0.046)RDS(0.002)SGVPVSK;ASPS(0.001)CS(0.06)S(0.93)PT(0.009)RDSSGVPVSK 215.81 1.6925999999999997e-66 307580800.0 12434.0 13023.2 11167.0 11647.7 14073.0 11851.8 10954.8 10742.800000000001 16239.1 17069.6 16541.9 True False 14532.555217886518 13686.025253415326 12750.648516920546 14501.387022885116 12002.880342390372 13105.949609411868 12945.145358771988 12265.624798445198 12560.969778514002 13213.56550464794 12434.089696785424 1.1687671210578132 1.1006857427571528 1.0254589461596824 1.1662604482123164 0.9653203921710061 1.0540337032312175 1.0411011722167878 0.9864513685803812 1.0102042115524854 1.062688610655916 1.0 13.602013270859366 -2.0000000000000826 0.2993677737957594 0.9997497477373423 2.370687100017482 0.42254029450841557 0.049277194679880565 24.64552131352845 0.30814966259546833 0.013621721740285489 18.38961102938801 0.009999999999998097 2.0000000000000826 1.3709373522801398 ASPSCSS(ph)PTRDSSGVPVSK ddPTM_A549_PD325901_60min_R1 4 ASPSCSSPTRDSSGVPVSK 19 1 Q8N5I9;J3KN91;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.001)CS(0.169)S(0.803)PT(0.027)RDSSGVPVSK;ASPSCS(0.023)S(0.779)PT(0.198)RDSSGVPVSK;ASPS(0.014)CS(0.055)S(0.81)PT(0.121)RDSSGVPVSK;ASPSCS(0.016)S(0.967)PT(0.016)RDSSGVPVSK 206.94 3.9959e-56 549783000.0 44820.9 44008.8 46542.2 45743.1 44210.399999999994 54101.399999999994 50745.100000000006 54073.0 38097.9 48627.100000000006 49840.3 True False 49371.08477259737 47717.57602489705 49700.83357298461 48568.54739688239 41105.21402160015 53660.816135662026 52676.23254928418 52994.471595552124 36496.77775201604 45556.77660724723 43710.259063692756 1.1295079423037941 1.0916790942685788 1.1370519104122132 1.1111475529374086 0.940401976609275 1.2276480918923343 1.2051228630909412 1.212403511915379 0.8349705202807072 1.0422444886648647 1.0 15.415684308320417 -8.760775252508136 24.999991409006423 0.922069410250201 1.129264680164599 0.40956516187512215 0.08940107382341554 10.582365321949293 398356.3012308724 0.016139103912145073 0.017773748241625743 1.734701473914163e-09 8.760775252508136 0.20719526991439796 ASPSS(ph)PGRQDS(ph)DEDDGPQRVEEVDQGR ddPTM_A549_PD325901_60min_R1 1 ASPSSPGRQDSDEDDGPQRVEEVDQGR 27 2 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 2 AS(0.11)PS(0.46)S(0.499)PGRQDS(0.932)DEDDGPQRVEEVDQGR 56.251999999999995 0.0033075 4586900.0 193.41 232.94 559.71 373.92 458.14 455.82 322.8 427.29 627.77 660.25 440.3 True False 213.0448408190833 252.5706713030011 597.6952864096509 397.0161891660659 425.96182689719814 452.1079530466393 335.0843306429377 418.7673657474797 601.3870100289812 618.5617023210305 386.14589129166393 0.5517211127287799 0.6540809497108678 1.5478483647989907 1.028150753690634 1.1031111207019433 1.170821607176322 0.8677661427966396 1.0844796621989072 1.5574088021947674 1.6018860132162278 1.0 8.593002210525805 -5.656722005341618 7.262147232416106 1.2111567037297888 0.5815175092168329 0.5031459965934968 0.23619258666336218 0.13816883483748313 8.440431720012613 0.034228244938132146 0.13433505959508432 2.204337021690579e-06 5.656722005341618 -0.6296391945129559 ASPSSPGRQDS(ph)DEDDGPQR ddPTM_A549_MK2206_60min_R1 2 ASPSSPGRQDSDEDDGPQR 19 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 AS(0.016)PS(0.126)S(0.118)PGRQDS(0.739)DEDDGPQR;AS(0.012)PS(0.093)S(0.086)PGRQDS(0.809)DEDDGPQR 52.909 0.0031390999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASPSSPGRQDS(ph)DEDDGPQRVEEVDQGR ddPTM_A549_MK2206_60min_R1 2 ASPSSPGRQDSDEDDGPQRVEEVDQGR 27 2 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 AS(0.001)PS(0.003)S(0.003)PGRQDS(0.993)DEDDGPQRVEEVDQGR;AS(0.001)PS(0.006)S(0.006)PGRQDS(0.987)DEDDGPQRVEEVDQGR 84.962 2.3764e-07 24621000.0 1138.33 1199.42 1227.21 1148.6100000000001 1518.77 1308.29 1369.37 1489.6899999999998 2109.89 2242.94 1986.99 True False 1330.4522745035201 1260.4653548629678 1401.2468314184714 1430.0195015630632 1295.360944902453 1446.7323794273839 1618.1668035876148 1700.8581194842893 1632.0032838019893 1736.2582962105168 1493.565544865805 0.8907893457217237 0.8439303914018846 0.938189044488417 0.9574534619379886 0.8672943409516317 0.9686433812031805 1.0834253703495853 1.1387904101906083 1.0926894299430447 1.162492200077177 1.0 10.544544836122588 -7.557334430223437 4.088005565450007 1.0559504536265667 0.9024470160556965 0.7303649256688429 0.054559560493399765 0.10303198532915438 3.8117486122888837 0.008384762260256223 0.012861886944151779 2.7711853203363988e-08 7.557334430223437 -0.15350343757087015 ASPSSPGRQDS(ph)DEDDGPQRVEEVDQGR ddPTM_A549_PD325901_60min_R1 4 ASPSSPGRQDSDEDDGPQRVEEVDQGR 27 2 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 AS(0.004)PS(0.004)S(0.016)PGRQDS(0.975)DEDDGPQRVEEVDQGR;AS(0.014)PS(0.054)S(0.054)PGRQDS(0.878)DEDDGPQRVEEVDQGR;AS(0.038)PS(0.009)S(0.009)PGRQDS(0.943)DEDDGPQRVEEVDQGR;AS(0.008)PS(0.024)S(0.024)PGRQDS(0.945)DEDDGPQRVEEVDQGR 79.515 9.4023e-07 51996500.0 1463.1899999999998 1262.45 1491.42 1667.16 1885.1599999999999 1646.51 1236.1299999999999 1198.72 1518.1999999999998 1718.18 2100.04 True False 1611.731971656453 1368.8410920686606 1592.6367298370244 1770.1366868049251 1752.7528650489405 1633.101368458651 1283.1716035862898 1174.8105892223523 1454.395333682717 1609.6938215735663 1841.748393250388 0.8751097476523417 0.7432291495869734 0.8647417506504665 0.9611175409692744 0.9516787805937027 0.8867125251438343 0.6967138444582539 0.637877895551738 0.7896818800074772 0.8740031089332008 1.0 10.84686026867359 -10.716757203913264 1.0925497803322088 0.9951942969337731 0.8222846052287135 0.11827018137099243 0.10249343276460621 0.5142988558492857 1.1351815555108955 0.06351249843791178 0.01844346809189651 1.919741688918713e-11 10.716757203913264 -0.17290969170505965 ASPTGS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 ASPTGSPPR 9 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 AS(0.021)PT(0.019)GS(0.96)PPR 60.167 0.014048 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASPTGS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 ASPTGSPPR 9 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 AS(0.004)PT(0.015)GS(0.981)PPR 61.765 0.011908 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASPTGT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 ASPTGTPPR 9 0 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 ASPTGT(1)PPR;AS(0.002)PT(0.307)GT(0.691)PPR 104.05 0.00066314 29550000.0 2828.1 3116.8999999999996 2593.3999999999996 2825.2 3895.6 2877.6 3012.6000000000004 3315.1 4168.1 4747.799999999999 4687.799999999999 True False 3305.4141395934435 3275.536896643697 2961.1831166635407 3517.374126828049 3322.562400470114 3182.105722003714 3559.950424273972 3785.0255770679573 3224.032005087977 3675.2686825096935 3523.6898833018386 0.9380547803758876 0.929575815444459 0.8403642814017428 0.9982076298757961 0.9429213439625226 0.9030606629383496 1.0102905029026437 1.0741653500793427 0.9149590661670061 1.043017065697569 1.0 11.782871244246817 -6.2830563151131065 24.986169653761728 0.967600669758586 0.9053560279852464 0.2658076473958155 0.055822727988374204 930.4177833684898 1075431.5334645445 0.007755164300765937 0.01803749499819496 5.211271319913097e-07 6.2830563151131065 -0.06224464177333966 ASPTPLAS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 ASPTPLASPGK 11 0 A0A1B0GTL5 A0A1B0GTL5 1 ASPT(0.007)PLAS(0.993)PGK 79.283 0.00097728 11314000.0 9534.3 9712.9 10144.0 8900.5 13762.0 8724.2 9533.5 8399.2 14373.0 13001.0 16794.0 True False 11143.456748745015 10207.24512284981 11582.571734184836 11081.12289955863 11737.62803041116 9647.389053344734 11265.613546377175 9589.812321471212 11117.538448964635 10064.065070413355 12623.58630917938 0.8827488857617211 0.8085852049371659 0.9175341658465503 0.8778109982502253 0.9298172280785227 0.7642352036148022 0.8924257552851886 0.7596741596718735 0.8806957212215037 0.7972429406289367 1.0 13.623834211854817 -10.170059455212126 0.8577571725929447 0.9923198480623676 0.8566663265901663 0.0 0.07956408944419296 0.3415821350974449 0.495158857671574 0.02488471635338462 0.010337059862964773 6.759904255046538e-11 10.170059455212126 -0.13565352147220133 ASPVPSDPEKPGT(ph)PGEGMLSSDLDR ddPTM_A549_MK2206_60min_R1 2 ASPVPSDPEKPGTPGEGMLSSDLDR 25 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ASPVPS(0.002)DPEKPGT(0.982)PGEGMLS(0.008)S(0.008)DLDR;ASPVPS(0.001)DPEKPGT(0.895)PGEGMLS(0.052)S(0.052)DLDR 74.404 2.7118e-06 12369900.0 3499.1 4384.2 3550.9 3489.0 4975.9 3930.1 4037.6 3812.3 5104.700000000001 5333.5 5607.200000000001 True False 4089.662535218493 4607.337053567742 4054.4710144831374 4343.805156627161 4243.95170153487 4345.980573410758 4771.179656459066 4352.705199679099 3948.493600530842 4128.658645723378 4214.77748915271 0.9703151698384513 1.0931388585578568 0.961965613823709 1.0306131623333665 1.0069218867323944 1.031129302696457 1.1320122281041718 1.0327247905450203 0.9368213649932446 0.979567404530614 1.0 12.041240753606559 -8.738705417763919 23.365099941655135 0.9701656538890711 1.0344081780620782 0.23788695369324775 0.04786865508260189 110.00993604872598 113063.52169156002 0.008271822213185417 0.009374948596984567 1.8251332716628578e-09 8.738705417763919 0.06424252417300713 ASPVPSDPEKPGT(ph)PGEGMLSSDLDR ddPTM_A549_PD325901_60min_R1 4 ASPVPSDPEKPGTPGEGMLSSDLDR 25 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 ASPVPS(0.002)DPEKPGT(0.998)PGEGMLSSDLDR;ASPVPS(0.003)DPEKPGT(0.994)PGEGMLS(0.001)S(0.002)DLDR;ASPVPSDPEKPGT(0.926)PGEGMLS(0.035)S(0.039)DLDR;ASPVPSDPEKPGT(0.991)PGEGMLS(0.004)S(0.004)DLDR 96.74799999999999 3.4142e-09 48351400.0 11451.0 12021.9 11130.7 10822.0 13511.500000000002 12329.2 11891.4 12771.7 12950.5 12467.999999999998 13473.1 True False 12613.497090219349 13035.027703861717 11886.09623633649 11490.45036145476 12562.498852144527 12228.795082933233 12343.933734223767 12516.958424295173 12406.235521576871 11680.768352197807 11815.994113017756 1.0674935151095732 1.103168093956728 1.0059328163714556 0.9724488901696098 1.0631774806238556 1.0349357799239838 1.04468008498958 1.0593233463534957 1.0499527507303716 0.9885557017440479 1.0 13.52845339198329 ASPVTS(ph)PAAAFPTASPANK ddPTM_A549_PD325901_60min_R1 1 ASPVTSPAAAFPTASPANK 19 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;H0YHQ7 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 ASPVT(0.051)S(0.494)PAAAFPT(0.346)AS(0.109)PANK 158.04 1.5883e-26 2602100.0 1717.0 1857.2 1700.6 1656.4 1565.0 2195.5 1938.2 1760.8 2348.3 1761.5 1947.1 True False 1891.3085760114068 2013.712761843967 1816.0129425385503 1758.7120660426588 1455.0797989569014 2177.6205759157056 2011.9592616237367 1725.6794626791216 2249.609117433225 1650.278589380529 1707.6190436838494 1.1075705573833867 1.1792517595141017 1.0634766280310757 1.0299206210821978 0.8521103136785446 1.2752379308314112 1.1782248910057442 1.0105763747845715 1.3173951917168478 0.9664208158632268 1.0 10.737770441652295 -7.299611955682433 24.99778817434391 1.151958988011475 1.05386849012275 0.06185518401903878 0.12818269741613936 1030.9975009562354 675159.0159923481 0.02135548973705961 0.03413936335585895 5.01635247078389e-08 7.299611955682433 -0.09809049788872493 ASPVTSPAAAFPT(ph)ASPANK ddPTM_A549_MK2206_60min_R1 1 ASPVTSPAAAFPTASPANK 19 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;H0YHQ7 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 ASPVTSPAAAFPT(0.913)AS(0.087)PANK 127.3 2.3452e-16 2145400.0 920.29 980.5 1116.3 927.15 998.11 1252.9 855.43 846.46 1217.6 1267.8 1397.5 True False 1075.6124530697107 1030.4032619458908 1274.6081256772993 1154.3017916213448 851.2893411883218 1385.4810463922904 1010.8505581347284 966.4482971750303 941.8155441076566 981.4030994746603 1050.4621809621399 1.0239421014515107 0.9809046728385055 1.213378405027261 1.0988513556614634 0.8103950400276271 1.3189252040690316 0.9622912432781442 0.9200219814575719 0.8965725384278265 0.934258383843741 1.0 10.036808507291298 -7.96561989837995 24.99993797879036 0.9471589763128877 1.0718306624697262 0.22124929688249573 0.1232089989352055 225.32536916880676 163847.8692861108 0.018428664494779805 0.025462807846715015 1.082380854257623e-08 7.96561989837995 0.12467168615683855 ASPVTSPAAAFPT(ph)ASPANK ddPTM_A549_PD325901_60min_R1 1 ASPVTSPAAAFPTASPANK 19 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;H0YHQ7 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 ASPVT(0.008)S(0.198)PAAAFPT(0.784)AS(0.01)PANK 140.96 1.7293e-20 3099200.0 2375.7 2333.1 2969.0 2790.8 2760.5 2777.8 2408.7 2720.0 2879.6 2655.5 3231.0 True False 2616.8793151020936 2529.7185250151624 3170.4941940473695 2963.1813776333333 2566.6120032080044 2755.1785177766546 2500.364396591214 2665.7474662012805 2758.5804260787436 2487.8312768095357 2833.6074829965173 0.9235151060282931 0.8927554504973304 1.1188896885233368 1.0457275382756233 0.9057754182995849 0.972321866846242 0.8823961722274598 0.9407610200768788 0.9735224242002519 0.8779731461531411 1.0 11.468424211741638 -9.781114722255634 1.2611719838699138 0.9947987545341478 0.962974990399757 0.0 0.07494059313480123 1.191511758072054 3.838156477579036 0.019201128743796463 0.012884905775464188 1.655332636756259e-10 9.781114722255634 -0.03182376413439081 ASPVTSPAAAFPTAS(ph)PANK ddPTM_A549_MK2206_60min_R1 1 ASPVTSPAAAFPTASPANK 19 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;H0YHQ7 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 ASPVT(0.003)S(0.06)PAAAFPT(0.092)AS(0.845)PANK 105.39 1.5977e-09 2209900.0 820.58 744.42 493.37 495.14 883.47 642.6 568.81 810.16 1122.1 980.09 930.86 True False 959.073842745161 782.3077983250989 563.3372847490899 616.4493222276797 753.5127333256319 710.5995054766422 672.1554142041022 925.002661010943 867.9461416254933 758.6869882979331 699.7017715709608 1.3706894590131757 1.1180589075380962 0.8051105594377628 0.8810172380207587 1.0769055674017454 1.0155748268025877 0.9606312882343975 1.321995596687057 1.2404515422003186 1.0843005107655217 1.0 9.450596334183437 ASPVTT(ph)SPTAATTQNPVLSK ddPTM_A549_MK2206_60min_R1 1 ASPVTTSPTAATTQNPVLSK 20 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 ASPVT(0.024)T(0.349)S(0.3)PT(0.3)AAT(0.024)T(0.003)QNPVLSK 71.607 0.00074058 5371700.0 847.0 1078.0 972.18 626.91 1092.4 801.14 809.03 796.45 1021.1 1220.3 1353.9 True False 989.9528928381762 1132.8655954897195 1110.0497425611009 780.5029781430596 931.7094070935298 885.9161030463081 956.020278746057 909.3492265258291 789.8224803616357 944.6333824648419 1017.6892642609242 0.9727457364474696 1.1131743600660262 1.0907550875730732 0.7669364368404572 0.9155146269231448 0.8705172926135625 0.9394029320338236 0.8935431063883975 0.7760939493994052 0.9282139604281493 1.0 9.991081408607027 -6.240316928299954 24.81757880531689 0.8883287879847385 1.0643200159791844 0.5342911428939636 0.07170491796996421 542.7372208468065 637681.8062858417 0.012457890952904801 0.03292102357748415 5.750201607085662e-07 6.240316928299954 0.1759912279944459 ASPVTTS(ph)PTAATTQNPVLSK ddPTM_A549_MK2206_60min_R1 1 ASPVTTSPTAATTQNPVLSK 20 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 ASPVTT(0.127)S(0.871)PT(0.002)AATTQNPVLSK 158.64 8.074e-27 5442800.0 1218.5 991.31 968.6 1148.8 1276.8 1092.8 1134.4 1185.1 1517.9 1582.6 1201.5 True False 1424.1530105352049 1041.7634447726464 1105.962044729044 1430.2560515715923 1088.9844113667325 1208.4393706580686 1340.5057960885595 1353.0915542165365 1174.098073588215 1225.0895608365645 903.1343902869493 1.5769004323738736 1.1534977030845333 1.2245819189518972 1.5836580546081993 1.2057833508263747 1.3380504426081217 1.4842816423618261 1.4982172850118398 1.3000258723567968 1.3564864476562803 1.0 9.818796872690612 -10.13895039149492 0.7881003724050902 1.0147746584089472 1.3704013242151354 0.04159685203216468 0.17335068110713509 0.38124314061974707 0.4652726602459873 0.07080497135434845 0.028245894087037485 7.261889036616426e-11 10.13895039149492 0.3556266658061882 ASPVTTS(ph)PTAATTQNPVLSK ddPTM_A549_PD325901_60min_R1 2 ASPVTTSPTAATTQNPVLSK 20 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 ASPVT(0.011)T(0.123)S(0.851)PT(0.015)AATTQNPVLSK;ASPVTT(0.012)S(0.547)PT(0.44)AAT(0.001)TQNPVLSK 192.16 2.4108e-44 19103200.0 1763.4499999999998 1823.67 2299.38 1673.5 2205.06 1993.77 2009.12 2208.5 2376.4 2439.8 2419.2 True False 1942.4741458167227 1977.3570710704207 2455.4297540951957 1776.8682942057424 2050.1841926440297 1977.5333981523374 2085.5781610326485 2164.4497349652665 2276.528172153607 2285.7506116211257 2121.653736572323 0.9155472037368939 0.931988588422999 1.1573187989017053 0.8374921239864498 0.9663142280494096 0.9320716967450015 0.9829964829237606 1.0201710569709097 1.0729970366566481 1.0773438531557522 1.0 11.050973505809985 -8.206077811528546 3.0987474072164543 1.0347906789695986 0.9598233840908647 0.21925275759768803 0.07519075314366527 0.34218823086017364 6.558250922544903 0.012032322357604758 0.0155571420611769 6.2218879906735585e-09 8.206077811528546 -0.07496729487873399 ASQDTEDEESGASGSDS(ph)GGSPLR ddPTM_A549_MK2206_60min_R1 1 ASQDTEDEESGASGSDSGGSPLR 23 0 O15234 O15234 CASC3 Protein CASC3 1 ASQDTEDEES(0.032)GAS(0.039)GS(0.039)DS(0.445)GGS(0.445)PLR 58.21 0.0025451999999999996 848520.0 0.0 0.0 0.0 0.0 195.89 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 167.07484049391388 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASQDTEDEESGASGSDS(ph)GGSPLR ddPTM_A549_PD325901_60min_R1 1 ASQDTEDEESGASGSDSGGSPLR 23 0 O15234 O15234 CASC3 Protein CASC3 1 ASQDTEDEES(0.001)GAS(0.012)GS(0.012)DS(0.488)GGS(0.488)PLR 76.155 0.00010109 1140200.0 0.0 0.0 0.0 0.0 0.0 243.86 182.3 183.52 0.0 0.0 169.42 True False 0.0 0.0 0.0 0.0 0.0 241.8740850115253 189.23752625838776 179.85954963134517 0.0 0.0 148.58241404186626 0.0 0.0 0.0 0.0 0.0 1.6278782827109817 1.2736199467392288 1.2105036170745342 0.0 0.0 1.0 7.215119560860024 -7.097947880786802 24.95213791060338 0.7089617901271897 2.184133569793887e-05 0.4257425921575346 0.4771843562986809 44.62270121459162 11361.510471072934 0.08072405254858955 0.13981819784984015 7.98090459497895e-08 7.097947880786802 -0.7089399487914918 ASQEPS(ph)PKPGTEVIPAAPR ddPTM_A549_MK2206_60min_R1 2 ASQEPSPKPGTEVIPAAPR 19 1 I3L4I0;I3L1Y9;Q96CP2 I3L4I0 FLYWCH2 FLYWCH family member 2 1 AS(0.006)QEPS(0.994)PKPGTEVIPAAPR;ASQEPS(0.998)PKPGT(0.002)EVIPAAPR 173.74 8.653999999999999e-35 323430000.0 38188.0 45871.0 42548.0 38589.0 56798.0 43263.0 43289.0 40667.0 63947.0 61290.0 63910.0 True False 44633.2007930393 48205.637969117735 48581.94618948108 48043.30673232602 48443.08943985565 47841.061944344816 51154.05095810793 46431.671787464235 49463.10660237542 47444.54643224633 48039.38317373195 0.9290960425454597 1.0034608020420357 1.0112941295225832 1.0000816737921026 1.0084036521589737 0.9958716949243517 1.064835715585938 0.9665334714966363 1.0296365884527419 0.9876177273272968 1.0 15.551930006489934 -5.254182368803629 3.5250720898733543 1.0117806494810624 0.9185233429752905 0.45677568852067874 0.023943657082699146 0.17303147878269556 3.69451085868625 0.0029135661563135275 0.04307354749317729 5.569518247838262e-06 5.254182368803629 -0.09325730650577191 ASQEPS(ph)PKPGTEVIPAAPR ddPTM_A549_PD325901_60min_R1 2 ASQEPSPKPGTEVIPAAPR 19 1 I3L4I0;I3L1Y9;Q96CP2 I3L4I0 FLYWCH2 FLYWCH family member 2 1 ASQEPS(1)PKPGTEVIPAAPR;ASQEPS(1)PKPGTEVIPAAPR 187.16 4.0974e-44 548750000.0 48843.0 50797.0 50392.0 53163.0 60668.0 51363.0 52415.0 56938.0 56038.0 57945.0 59629.0 True False 53801.50540368385 55077.84146208697 53811.9041517127 56446.75776806685 56406.888973237896 50944.71675734838 54409.68150758853 55802.32692300308 53682.91773739431 54286.3428110444 52295.01101937462 1.028807611948893 1.0532140712558862 1.0290064597515065 1.079390876256897 1.0786284938794617 0.9741792909934377 1.0404373275192629 1.0670678872661303 1.0265399450342498 1.038078810059568 1.0 15.67438569847055 -9.828820124560186 0.43720568901410894 0.9957711130717789 1.0467186934370138 0.023148958014050924 0.030184136540786503 1.2324169845588349 0.4790724718405925 0.02612699244978496 0.009408621939051167 1.4831322394480136e-10 9.828820124560186 0.050947580365234946 ASQFTIVLEDEGSQGTDAPTPGNAENEPPEKET(ph)LSPPRR ddPTM_A549_MK2206_60min_R1 2 ASQFTIVLEDEGSQGTDAPTPGNAENEPPEKETLSPPRR 39 2 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 ASQFTIVLEDEGS(0.001)QGT(0.001)DAPT(0.015)PGNAENEPPEKET(0.492)LS(0.492)PPRR;ASQFTIVLEDEGS(0.069)QGT(0.069)DAPT(0.106)PGNAENEPPEKET(0.378)LS(0.378)PPRR 72.389 1.939e-05 29024000.0 868.98 1203.32 1229.97 812.79 1336.62 1142.79 1238.3899999999999 1166.24 1673.8600000000001 1629.42 1895.65 True False 1015.6425794787704 1264.563848204721 1404.3982409202792 1011.92358648753 1140.004968609807 1263.7192792773922 1463.3894330201956 1331.5580914602083 1294.733382605159 1261.3328903186618 1424.9077877215611 0.7127777588350408 0.8874706553655437 0.9856064041631235 0.710167770298739 0.8000552586161972 0.8868779370615198 1.0270064109623311 0.9344872018626414 0.9086436285645179 0.8852031697682999 1.0 10.476652843587646 -7.532507822308931 6.343357690302698 0.9586151716209481 0.8275761333720747 0.3755858332761056 0.08043374834222963 0.1232081139671598 21.16155369750386 0.012112359248123728 0.018404755980679553 2.9342166537430436e-08 7.532507822308931 -0.13103903824887342 ASQFTIVLEDEGSQGTDAPTPGNAENEPPEKET(ph)LSPPRR ddPTM_A549_PD325901_60min_R1 2 ASQFTIVLEDEGSQGTDAPTPGNAENEPPEKETLSPPRR 39 2 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 ASQFTIVLEDEGSQGTDAPT(0.005)PGNAENEPPEKET(0.497)LS(0.497)PPRR;ASQFTIVLEDEGSQGTDAPT(0.009)PGNAENEPPEKET(0.537)LS(0.453)PPRR 95.471 7.2054e-10 47160000.0 1709.94 1517.3899999999999 1542.9299999999998 1669.81 1843.0300000000002 2246.99 1348.1799999999998 2017.33 1801.76 1865.1 2553.5 True False 1883.5318500087046 1645.265780580667 1647.6425081918171 1772.95037128634 1713.5819309083327 2228.69125842716 1399.4857276524037 1977.0927705852298 1726.0382929891778 1747.3372677000425 2239.435687970166 0.8410743206990445 0.7346787359952913 0.7357400424770614 0.7916951492781424 0.7651847026076157 0.99520217097516 0.624927849087242 0.8828531139366075 0.7707469798133235 0.7802578466916532 1.0 11.12891952018869 -10.85507169930708 0.6423925808302332 1.0347765050851487 0.7883682702083932 0.0 0.11052125727874011 0.8090998500155632 0.4544497611050554 0.11644094250735672 0.01677275887885536 1.396137848387549e-11 10.85507169930708 -0.24640823487675556 ASQGLLSSIENSES(ph)DSSEAKEEGSR ddPTM_A549_MK2206_60min_R1 2 ASQGLLSSIENSESDSSEAKEEGSR 25 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ASQGLLSSIENS(0.003)ES(0.935)DS(0.051)S(0.011)EAKEEGSR;ASQGLLSSIENS(0.017)ES(0.971)DS(0.01)S(0.002)EAKEEGSR 199.97 1.5757999999999997e-68 54719000.0 4483.2 4492.799999999999 4312.2 3471.2 6630.6 5063.4 4278.2 4034.1 6963.3 6456.1 6746.1 True False 5239.854556283485 4721.4643296996355 4923.734802065443 4321.644155828091 5655.247523502705 5599.205627187102 5055.493562082219 4605.946028913111 5386.12366810516 4997.6625260438195 5070.857187111765 1.0333271797914658 0.9310978707307798 0.9709866833914683 0.8522512065242352 1.1152448816496436 1.104193121710902 0.9969702114528892 0.9083170475831414 1.0621722263830828 0.9855656236476195 1.0 12.308013928353375 -6.765257132436386 24.99992484562856 1.028899152629493 0.9475052488903818 0.23453948288716575 0.06726046388199652 106.29956924074727 696091.5735462311 0.009627647426298675 0.01869667858403908 1.7168915673592637e-07 6.765257132436386 -0.08139390373911126 ASQGLLSSIENSES(ph)DSSEAKEEGSR ddPTM_A549_PD325901_60min_R1 2 ASQGLLSSIENSESDSSEAKEEGSR 25 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ASQGLLSSIENS(0.008)ES(0.94)DS(0.044)S(0.008)EAKEEGSR;ASQGLLSSIENS(0.006)ES(0.993)DS(0.001)SEAKEEGSR 205.96 3.6684999999999994e-69 118748000.0 6915.7 6725.7 5746.5 7062.6 6599.5 6062.1 7047.3 6526.4 6570.7 7100.799999999999 7445.6 True False 7617.776772930744 7292.498342846204 6136.492046511685 7498.8407616716295 6135.973887039029 6012.73226748285 7315.488857930534 6396.225832138242 6294.5563292247525 6652.454276169893 6529.838401547158 1.1666103055667982 1.1167961432427398 0.9397617014622789 1.1483960705512832 0.9396823488901642 0.9208087394717476 1.1203169830661088 0.979538150687273 0.9639681630916535 1.0187777808703018 1.0 12.672831573497911 -2.000000000005348 0.5488419463902087 0.9871724096945202 9.490511870085959 0.3253713231844795 0.07199077085989879 86.02303300186786 0.7149514114684468 0.011627809887199287 866.0944062683119 0.009999999999876854 2.000000000005348 8.503339460391437 ASQGLLSSIENSES(ph)DSSEAKEEGSRK ddPTM_A549_MK2206_60min_R1 1 ASQGLLSSIENSESDSSEAKEEGSRK 26 2 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ASQGLLSSIENS(0.036)ES(0.885)DS(0.036)S(0.036)EAKEEGS(0.008)RK 73.548 1.6087e-06 3174100.0 1376.4 1459.6 1495.8 1480.1 2500.8 1792.8 1369.6 1705.1 2655.6 2222.2 2970.6 True False 1608.702670250845 1533.8874055443357 1707.9269321760335 1842.7245664442141 2132.9356327897276 1982.5129060356737 1618.4385916104463 1946.8031466497464 2054.11084012179 1720.2034766150725 2232.9180356108295 0.7204485989163385 0.6869429961519974 0.7648856361665862 0.8252540115921114 0.9552234335400712 0.8878574468110041 0.7248087774828295 0.871865028452415 0.9199221858405 0.7703836187361438 1.0 11.1247145793567 -2.440772498792158 0.11259212452369069 1.0778391556493132 2.0475177826783893e-14 0.13251509022022478 0.09276347170109521 37.61051654784081 0.3136998747888141 0.31053411082579535 6.275480075355971 0.0036243280582141783 2.440772498792158 -1.0778391556492928 ASQGS(ph)DLEQNEASR ddPTM_A549_MK2206_60min_R1 2 ASQGSDLEQNEASR 14 0 Q5HYY5;Q96T21-2;Q96T21-3;Q96T21 Q5HYY5 SECISBP2 Selenocysteine insertion sequence-binding protein 2 1 AS(0.003)QGS(0.996)DLEQNEAS(0.001)R;AS(0.003)QGS(0.997)DLEQNEASR 86.49700000000001 0.00010241 4259800.0 1651.9099999999999 1444.56 1058.73 1129.6 1251.99 1059.52 1135.77 1361.19 1500.97 2075.05 2109.24 True False 1930.712022678053 1518.081933785369 1208.873834003697 1406.3520507096703 1067.8239295011244 1171.6377031475447 1342.1247073549919 1554.1428509695436 1161.0026915565609 1606.2947638151863 1585.4574959374484 1.217763344413382 0.9575040249740397 0.7624763433275863 0.8870323261981383 0.6735115461860692 0.7389902953246813 0.8465220359385422 0.98024882720089 0.7322824449923736 1.013142747712336 1.0 10.63068348583628 -5.336137708575834 3.024226263931323 0.8496003362151002 1.2482905744465524 0.48607716859779304 0.11022895591596998 0.21945938852130217 3.1039902320624946 0.016575190507520456 0.18897251777674734 4.611713205366744e-06 5.336137708575834 0.3986902382314522 ASQGS(ph)DLEQNEASR ddPTM_A549_PD325901_60min_R1 2 ASQGSDLEQNEASR 14 0 Q5HYY5;Q96T21-2;Q96T21-3;Q96T21 Q5HYY5 SECISBP2 Selenocysteine insertion sequence-binding protein 2 1 ASQGS(1)DLEQNEASR;AS(0.015)QGS(0.985)DLEQNEASR 126.77 1.2965e-07 6455100.0 1558.98 1937.6999999999998 1759.01 1804.81 1854.9699999999998 1654.34 2048.56 1611.49 1897.76 1699.46 1605.49 True False 1717.2465019395813 2100.9967793587416 1878.3869963864133 1916.2890146790933 1724.6833064990958 1640.8676035346791 2126.5190718150448 1579.3475677605506 1818.0037468381718 1592.1558055683422 1408.0249080396402 1.219613724256102 1.4921588157725916 1.334058073590223 1.3609766444736386 1.2248954522404945 1.1653683071695233 1.51028512327651 1.1216758728788676 1.291173001597916 1.1307724717633463 1.0 10.459457140219273 -14.155631325301975 0.19838639755920742 3.266894781750435e-11 1.3666062642429881 0.3607070565403354 0.12016061577152996 19.213526226656292 0.302449863487096 7.588127435840505 0.09799454395682511 6.988253886192007e-15 14.155631325301975 1.3666062642103192 ASQPDLVDT(ph)PTSSKPQPK ddPTM_A549_MK2206_60min_R1 4 ASQPDLVDTPTSSKPQPK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ASQPDLVDT(0.763)PT(0.158)S(0.034)S(0.045)KPQPK;ASQPDLVDT(0.841)PT(0.119)S(0.017)S(0.023)KPQPK;ASQPDLVDT(0.87)PT(0.113)S(0.015)S(0.002)KPQPK;ASQPDLVDT(0.643)PT(0.282)S(0.066)S(0.01)KPQPK 137.42 2.0125e-13 100372200.0 16361.600000000002 15960.7 13800.999999999998 12190.0 19363.7 14023.599999999999 13613.2 12434.400000000001 19530.2 20484.600000000002 25667.6 True False 19123.038077285833 16773.03145633836 15758.189324081717 15176.550547229896 16515.325380938277 15507.568043887703 16086.54222788502 14197.014278752933 15106.640883320757 15857.114632827428 19293.62653027822 0.9911583002436232 0.8693560762159362 0.816756212179799 0.7866095326046018 0.8559990188998502 0.8037663639622695 0.8337749361241029 0.7358395922338924 0.78298607364527 0.8218835690606044 1.0 14.235836724880603 -10.802782321012051 1.0668344793613707 0.9993085240984063 0.8252951927676316 0.0 0.08041395108461047 0.336363490234672 0.683931343998149 0.043181314935273905 0.010957675273163773 1.574771980817257e-11 10.802782321012051 -0.17401333133077468 ASQPDLVDT(ph)PTSSKPQPK ddPTM_A549_PD325901_60min_R1 2 ASQPDLVDTPTSSKPQPK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ASQPDLVDT(0.78)PT(0.199)S(0.018)S(0.003)KPQPK;ASQPDLVDT(0.742)PT(0.224)S(0.027)S(0.008)KPQPK 223.15 2.393e-64 232670000.0 15643.2 15243.1 17339.8 15971.8 18770.1 15958.4 18446.9 19182.5 17496.4 17617.6 17881.8 True False 17231.286148084826 16527.689532664102 18516.583100687967 16958.34181141037 17451.752929329687 15828.440081390656 19148.906874031007 18799.88998911987 16761.08715336997 16505.221729361565 15682.451962069668 1.0987622464753115 1.0538970291532705 1.1807198992525572 1.081357803768609 1.1128204295820152 1.0093090110955916 1.2210403653934647 1.1987851156560332 1.0687797542061113 1.0524643575686945 1.0 13.936863522992613 -9.44701177553863 1.509041401041301 1.0184508070762677 1.1163849890438777 0.23650059001912394 0.061774000393124306 0.30063163549194716 1.4027823181335022 0.0143889594198427 0.011760207224671191 3.5726315112331736e-10 9.44701177553863 0.09793418196761006 ASQS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 ASQSPLR 7 0 A0A1B0GW05 A0A1B0GW05 1 ASQS(1)PLR;ASQS(1)PLR 109.02 0.0087957 511380000.0 6605.4 6602.2 6305.9 5866.799999999999 8716.0 6425.1 6067.3 6169.299999999999 9505.5 9758.5 9406.1 True False 7720.23003347496 6938.22377972377 7200.171441107666 7304.166263370659 7433.887946015386 7104.999817363796 7169.649873596719 7043.817167688862 7352.519427164359 7554.048072427408 7070.305774846504 1.0919230765012515 0.9813187718708528 1.0183677581135424 1.0330764320485464 1.0514238256091228 1.0049070073660349 1.014050891420233 0.9962535415014329 1.039915339068059 1.0684188651786288 1.0 12.787556894366547 -7.285605947519022 24.92149645815234 1.016133643394253 1.0311718139130954 0.03409465049697158 0.03139044315701132 1743.931196334786 1798400.1675568516 0.004110557622395665 0.006572338127062323 5.180766901348101e-08 7.285605947519022 0.015038170518842486 ASQS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 ASQSPLR 7 0 A0A1B0GW05 A0A1B0GW05 1 AS(0.001)QS(0.999)PLR;ASQS(1)PLR 107.56 0.0092087 573320000.0 10202.099999999999 10374.6 9544.1 9577.0 10581.8 9928.400000000001 10707.099999999999 10946.0 11441.1 11775.099999999999 12753.9 True False 11237.809681610936 11248.903951661863 10191.820019335635 10168.549539054902 9838.57087322821 9847.54640215053 11114.564549649936 10727.673443029114 10960.270354496983 11031.618176448867 11185.251153633328 1.0046989135295845 1.0056907795054615 0.9111838330089714 0.9091033718766192 0.879602141971781 0.880404585189107 0.9936803740021135 0.9590909757573411 0.9798859412232989 0.9862646823862729 1.0 13.449310030585131 -7.7977871771713545 24.99937712652304 0.9876216532101576 0.9308013751103494 0.28671189803346964 0.04062213777343138 170.90526667117243 117545.04248887551 0.006890877022341094 0.009521265787230643 1.5929891684804353e-08 7.7977871771713545 -0.056820278099808164 ASQS(ph)PLRGASDVGAGEPGPER ddPTM_A549_MK2206_60min_R1 2 ASQSPLRGASDVGAGEPGPER 21 1 A0A1B0GW05 A0A1B0GW05 1 AS(0.029)QS(0.971)PLRGASDVGAGEPGPER;AS(0.05)QS(0.95)PLRGASDVGAGEPGPER 145.52 3.2016000000000006e-22 20616000.0 3585.7 3844.2 3586.2 3592.3999999999996 4981.5 3517.1000000000004 2915.2 2801.02 5503.9 5737.3 6358.7 True False 4190.878498051771 4039.8533600942264 4094.7770852852564 4472.5381612689625 4248.727948953146 3889.2771875379713 3444.85410503999 3198.0731627639884 4257.275437922249 4441.239945272097 4779.659298807841 0.8768153200997139 0.8452178507999222 0.8567089889245013 0.9357441360693886 0.8889185783624531 0.8137143140114711 0.7207321463057456 0.6691006540072141 0.8907068834349998 0.9291959254041071 1.0 12.222692069094396 -9.613424014566537 1.3747003826203588 0.9746533535387593 0.8310521198395856 0.312923568600295 0.07510055744830617 0.2949829953997624 1.134250711873825 0.02095948687017067 0.01564319754825579 2.4354318729649336e-10 9.613424014566537 -0.14360123369917366 ASQS(ph)RPNS(ph)SALETLGGEK ddPTM_A549_MK2206_60min_R1 2 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 2 AS(0.034)QS(0.965)RPNS(0.868)S(0.131)ALET(0.002)LGGEK;AS(0.278)QS(0.791)RPNS(0.748)S(0.182)ALETLGGEK 82.486 5.5388999999999994e-05 28532000.0 4179.8 5125.6 4891.0 3586.2 7193.5 5166.6 5004.4 4689.6 7123.5 6395.200000000001 5968.1 True False 4885.248053701308 5386.4711467923025 5584.617345415814 4464.819160990635 6135.345679171825 5713.326182688487 5913.634701997164 5354.365161297668 5510.038623891995 4950.519878340708 4486.056058819426 1.0889850660909788 1.2007141855043681 1.2448835396153055 0.9952660204084968 1.3676480183768447 1.2735744065115486 1.3182257699101128 1.1935573454930815 1.2282589766259064 1.1035350012196488 1.0 12.131231933457975 -10.621132213339807 0.8288179913727047 0.9955366548046958 1.2159287110658434 0.2525581550963899 0.10121753434757501 0.5197451522614196 0.6170699302582547 0.07162348888509698 0.017941870232608913 2.3925872642832915e-11 10.621132213339807 0.22039205626114766 ASQS(ph)RPNS(ph)SALETLGGEK ddPTM_A549_PD325901_60min_R1 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 2 AS(0.157)QS(0.639)RPNS(0.625)S(0.567)ALET(0.012)LGGEK 67.449 0.005739899999999999 6898100.0 1710.0 1780.6 2083.1 2002.0 2537.3 2260.1 1999.6 2530.1 2100.9 1946.5 2936.0 True False 1883.5979411645349 1930.657411016244 2224.4716926979027 2125.65899312811 2359.0888012098058 2241.694494933766 2075.695872223105 2479.6351706749474 2012.6064790765492 1823.597657808231 2574.8906128374433 0.7315254216134925 0.7498017202714192 0.8639092012715093 0.8255337071525943 0.9161899109221455 0.8705979523003866 0.8061297291133303 0.9630060237558878 0.7816279530642757 0.7082233508159351 1.0 11.330295429319488 -14.999999998650722 0.3119232822274141 2.5928519341233685 0.8221094297081626 0.0 0.11035257852050395 31.136261194321406 0.4115431202820142 31.409657697735383 0.023228140623486836 1.0000000031068274e-15 14.999999998650722 -1.7707425044152059 ASQS(ph)RPNSS(ph)ALETLGGEK ddPTM_A549_MK2206_60min_R1 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 2 AS(0.374)QS(0.548)RPNS(0.488)S(0.585)ALET(0.004)LGGEK 87.72 2.1649000000000002e-06 13685000.0 1839.7 1990.8 2166.3 1924.7 3369.8 2676.8 1894.7 2229.7 3517.0 2624.9 2136.7 True False 2150.1963836533578 2092.1232166056884 2473.5139144089712 2396.2515864030656 2874.1068839470668 2960.057199283965 2238.9424646059524 2545.766803169866 2720.4051154949284 2031.9332669277765 1606.0984200800035 1.3387700011225037 1.302612088057141 1.5400761768296614 1.4919705769237372 1.7894961155642635 1.843011089654467 1.3940256939511997 1.5850627653584612 1.6937972676415551 1.2651362092906866 1.0 10.649344587113049 -10.818948091594375 0.9888578762612574 0.9893582330132662 1.5632524445073477 0.4225487538912275 0.18089053567197705 0.32633650746701115 0.549158104038994 0.13533613026927382 0.03110880339659154 1.5172317014974035e-11 10.818948091594375 0.5738942114940815 ASQS(ph)RPNSS(ph)ALETLGGEK ddPTM_A549_PD325901_60min_R1 2 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 2 AS(0.062)QS(0.915)RPNS(0.311)S(0.698)ALET(0.014)LGGEK;AS(0.012)QS(0.984)RPNS(0.155)S(0.513)ALET(0.335)LGGEK 134.98 2.6315e-13 69173000.0 11691.8 12519.5 13549.7 12739.9 13650.099999999999 12681.5 12970.2 14111.3 11881.5 14281.0 13470.0 True False 12878.742928951753 13574.562202189063 14469.264122965176 13526.814688587818 12691.364066288566 12578.226068537931 13463.788058565768 13829.839051399313 11382.161874029238 13379.29522278929 11813.275393365244 1.0901923895031613 1.1490938584072137 1.2248308484445922 1.1450520061679894 1.0743306698340824 1.0647534785824355 1.1397167686556695 1.170703178490755 0.963506012940481 1.132564405491095 1.0 13.52812140682594 -8.76586914336542 24.999469228526934 0.9827667194804135 1.1324599110817588 0.25295402840215786 0.06276933742030212 46.029989026144264 259770.34988898798 0.008160930530532748 0.00883306266298814 1.7144738152858899e-09 8.76586914336542 0.1496931916013453 ASQS(ph)RPNSSALETLGGEK ddPTM_A549_MK2206_60min_R1 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 AS(0.287)QS(0.705)RPNS(0.003)S(0.005)ALETLGGEK 113.13 2.592e-10 14254000.0 4948.3 5965.3 6070.0 5319.9 7320.2 5932.5 5795.7 5971.8 8031.9 8256.0 7986.6 True False 5783.452065680223 6268.908290143617 6930.817273905951 6623.275738819389 6243.408277010303 6560.273212325216 6848.703669244056 6818.320937870488 6212.687474308706 6390.963865958976 6003.306801053474 0.9633777278658038 1.0442425313068349 1.1544999287209035 1.1032712400534186 1.0399948701463493 1.0927766029172463 1.1408218663824128 1.135760867106441 1.0348775566856736 1.0645739219653867 1.0 12.55154168393592 -8.949987811281733 6.052465454433292 1.0150547405288595 1.0868216020050945 0.13561241257067613 0.05406642742964775 0.19266493239345744 14.928569716965894 0.009480853922706372 0.009935555017293478 1.1220499448212144e-09 8.949987811281733 0.07176686147623501 ASQS(ph)RPNSSALETLGGEK ddPTM_A549_PD325901_60min_R1 2 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 AS(0.289)QS(0.71)RPNS(0.001)SALETLGGEK;AS(0.033)QS(0.784)RPNS(0.145)S(0.039)ALETLGGEK 123.2 5.1231e-11 39783000.0 12921.099999999999 12661.8 14002.400000000001 14352.0 16306.400000000001 14734.2 13795.599999999999 15407.5 15072.3 15141.9 15990.2 True False 14232.840559988925 13728.854322590965 14952.687067271427 15238.49044424308 15161.09471802609 14614.209560308444 14320.599107241978 15100.185325550076 14438.863646335136 14185.837849867188 14023.50677022932 1.0149273497128408 0.9789886757666152 1.0662587690986591 1.0866390763680496 1.081120076913413 1.0421223307235201 1.0211853099143047 1.07677669879309 1.0296186170058108 1.0115756409789372 1.0 13.775559539697234 -9.7107131516528 0.904382316617328 1.0042415277295553 1.0459478961614403 0.1845533318403727 0.031099951241917986 0.5826710547596061 0.9950806413953308 0.011181308238812868 0.0068037293058464555 1.946645402236059e-10 9.7107131516528 0.04170636843188502 ASQSRPNS(ph)SALETLGGEK ddPTM_A549_MK2206_60min_R1 2 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 ASQS(0.001)RPNS(0.971)S(0.028)ALETLGGEK;AS(0.001)QS(0.027)RPNS(0.945)S(0.027)ALETLGGEK 158.77 3.1142e-23 33446000.0 5218.4 6809.3 5396.1 5230.9 6218.3 5592.9 5185.5 5006.8 7442.1 7682.299999999999 8325.8 True False 6099.138342369231 7155.864285128148 6161.348120547594 6512.470734824025 5303.596307332199 6184.736965733444 6127.638227800798 5716.529232681931 5756.476232591644 5946.8630944109345 6258.27407960972 0.9745719450416892 1.1434245598867099 0.9845123499180192 1.0406176929902307 0.8474535055299054 0.988249617555762 0.9791258979477184 0.9134354232434683 0.9198184929846713 0.9502401171253584 1.0 12.61154912710719 -6.6226416631214935 24.962138521528843 0.9538956099826135 1.0398469356120805 0.36904980860865777 0.05731579491102723 10.528924595316152 2618.9615013318203 0.008105634790472884 0.01687322445028181 2.384285935058765e-07 6.6226416631214935 0.08595132562946706 ASQSRPNS(ph)SALETLGGEK ddPTM_A549_PD325901_60min_R1 2 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 AS(0.003)QS(0.136)RPNS(0.837)S(0.023)ALETLGGEK;ASQS(0.001)RPNS(0.972)S(0.027)ALETLGGEK 176.44 3.4472999999999997e-31 44963000.0 7315.5 6275.799999999999 7219.7 6684.4 8400.7 7917.1 8065.6 7136.1 7398.200000000001 7226.6 8380.8 True False 8058.164174613538 6804.683690922012 7709.672257582953 7097.280206626148 7810.663812841695 7852.625762506135 8372.540821665678 6993.764887337853 7087.279381933525 6770.311242700733 7350.014730268403 1.0963466700860987 0.9258054494638439 1.0489328988462334 0.9656144194376295 1.0626732189632593 1.0683823163194366 1.1391189172977256 0.9515307307530334 0.9642537657437751 0.9211289352686098 1.0 12.843531425939508 ASREEILAQAK ddPTM_A549_PD325901_60min_R1 1 ASREEILAQAK 11 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 98.353 0.00027941 3895100.0 2702.2 2683.8 2314.7 2725.1 2600.8 3642.5 2537.1 3170.3 2956.2 2678.8 3706.0 False True 2976.5253547454986 2909.973244796921 2471.7894614218408 2893.423237848858 2418.1287802729144 3612.8366876670243 2633.6507288543903 3107.065879447763 2831.9611944624194 2509.6601108331324 3250.185494269606 0.9158016857786743 0.8953252821808132 0.7605071974445294 0.8902332629784502 0.7439971609424482 1.1115786142165756 0.8103078219682457 0.9559657087036488 0.8713229443228527 0.7721590399249236 1.0 11.66630634250354 -7.226551186077703 24.999720586544 0.9392426260439984 0.8424255558931393 0.11933396832350007 0.09985982347295015 719.9906827076056 515921.7254268437 0.012537342521562687 0.021714671466250186 5.935383894564335e-08 7.226551186077703 -0.09681707015085916 ASREES(ph)WESGR ddPTM_A549_MK2206_60min_R1 2 ASREESWESGR 11 1 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 AS(0.004)REES(0.996)WESGR;AS(0.001)REES(0.991)WES(0.008)GR 82.069 0.00060585 33163000.0 2029.33 1960.4900000000002 1350.44 1369.99 2608.41 1762.0 1794.02 1792.44 2374.74 2806.1000000000004 2609.3 True False 2371.8312916449795 2060.270567070167 1541.9526984140941 1705.637611501188 2224.716344339834 1948.4536704790612 2119.9702118289815 2046.5238591172788 1836.8651816805316 2172.200061078911 1961.3387969835517 1.2092919873367856 1.05044093872959 0.7861735569528049 0.8696292624835545 1.1342845752918083 0.9934304432644134 1.0808791500425106 1.0434320996784123 0.9365364028415413 1.10750884264343 1.0 10.937623049417136 -10.872066655064252 0.005333749702360853 5.963834693579339e-05 1.9555486147339405 0.0 0.11946420639229254 61116.7746466495 69.67958822303618 13129.939800009388 12421.73622941969 1.3425588907858396e-11 10.872066655064252 1.9554889763870047 ASREES(ph)WESGR ddPTM_A549_PD325901_60min_R1 2 ASREESWESGR 11 1 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 AS(0.004)REES(0.991)WES(0.005)GR;ASREES(0.993)WES(0.007)GR 77.078 0.0009748 38994000.0 2643.2 2090.8 2135.0 2072.33 2411.5 2330.8999999999996 2109.97 1722.0 2572.3 2240.7 2745.9 True False 2911.5357181790027 2266.9990536632376 2279.893938797955 2200.3331174970926 2242.1245592233668 2311.9179232074316 2190.2660629698876 1687.6533591171328 2464.1951764142095 2099.221819599746 2408.1717076942555 1.209023305471312 0.9413776627389308 0.9467322996585147 0.9136944473132436 0.9310484597338479 0.9600303482599322 0.909514074919099 0.7008027516164971 1.0232639012164106 0.8717076996181811 1.0 11.233722547609881 -4.120753147991789 15.758630024688618 0.9743914752245527 0.9639337291576338 0.0 0.11882919782831294 0.0 0.0 0.014893004001262629 0.0 7.572631994193128e-05 4.120753147991789 -0.01045774606691896 ASRPALS(ph)LQETR ddPTM_A549_MK2206_60min_R1 2 ASRPALSLQETR 12 1 Q9Y2U5;F8W6K3 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 ASRPALS(1)LQETR;AS(0.002)RPALS(0.994)LQET(0.003)R 90.75399999999999 7.5731e-05 16572700.0 1411.65 1373.93 1391.24 1299.44 1464.3000000000002 1498.08 1473.91 1457.22 2088.66 1994.0900000000001 2091.63 True False 1649.9020084710878 1443.8571684704918 1588.5387519190954 1617.802858334079 1248.9034097464807 1656.6058312549776 1741.700368399937 1663.7853975490843 1615.5818449046455 1543.6236840443487 1572.2205449487244 1.0494087574239763 0.9183553624899241 1.0103790826438432 1.028992315061524 0.7943563730667391 1.0536726775243896 1.1077964691376934 1.0582391909929827 1.0275796548361065 0.9818111644729154 1.0 10.618587892071783 ASRPLS(ph)AR ddPTM_A549_MK2206_60min_R1 1 ASRPLSAR 8 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AS(0.003)RPLS(0.997)AR 48.44 0.009889 16765000.0 824.71 740.35 668.24 792.55 1018.3 757.62 893.16 816.73 1606.9 1101.3 1192.9 True False 963.9008857763553 778.0306527094748 763.0064802495738 986.7247855789219 868.5094189338533 837.7908455325461 1055.4356107496976 932.5039786307242 1242.9397156920118 852.515565113932 896.670007634874 1.074978395138714 0.8676889447453121 0.8509334245071256 1.100432463645777 0.9685942560125334 0.9343357516132026 1.1770613511804595 1.0399633875235423 1.386172956727398 0.9507573107776771 1.0 9.808433332175564 -7.7656122901998605 24.719747964496253 1.173685261480563 0.9626608451030931 0.1589340355968596 0.13377180680757894 87.75606053174155 519855.6428158551 0.024023419207104373 0.0338432307404876 1.7154881000474172e-08 7.7656122901998605 -0.21102441637746994 ASRPLS(ph)AR ddPTM_A549_PD325901_60min_R1 1 ASRPLSAR 8 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AS(0.045)RPLS(0.955)AR 40.727 0.026764999999999997 16880000.0 1357.4 1268.5 1098.7 1250.6 1411.0 1346.9 1167.1 1396.7 1281.7 1405.5 1869.3 True False 1495.202248734934 1375.4009468011366 1173.2643890198192 1327.846721681326 1311.8962276857442 1335.9312929632722 1211.5146291616259 1368.8417228100473 1227.8346062318121 1316.756490135869 1639.3879504690155 0.9120490658157936 0.8389722191185104 0.7156722047909146 0.8099649148338804 0.8002353727867899 0.8148963718935919 0.7390042294839494 0.8349711991102733 0.7489591502002553 0.8032000538732492 1.0 10.678941583875872 -10.829526819130491 0.9760795367463186 1.0050596604671465 0.7968180254896128 0.0 0.07680911311407983 0.2682643168688483 0.4353180886178496 0.040335062065631394 0.009012042578763393 1.4807208130029916e-11 10.829526819130491 -0.20824163497753367 ASRVPS(ph)S(ph)DEEVVEEPQSR ddPTM_A549_MK2206_60min_R1 1 ASRVPSSDEEVVEEPQSR 18 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 AS(0.004)RVPS(0.997)S(0.999)DEEVVEEPQSR 75.3 0.00014406 5815800.0 756.86 918.2 892.9 680.95 1077.6 781.21 462.58 694.42 1218.5 1277.3 1403.1 True False 884.5994645495889 964.9324580507048 1019.5266464366762 847.7827805690072 919.086467488088 863.8771236747715 546.6247982674943 792.8561615720592 942.5116955446612 988.7570428766229 1054.671546410002 0.8387440313154159 0.9149127624948636 0.96667692411637 0.8038358325440523 0.8714433139080766 0.8190958849845945 0.5182891300406759 0.7517564726865568 0.8936542364804265 0.9375023401761945 1.0 10.04257805881348 -9.346650429753392 1.6444988963448137 0.968625726078356 0.8144436049175704 0.22370538570679077 0.11053918360074928 0.35084203950062953 1.9521676226222224 0.026616407106504508 0.022923796788703817 4.501420352953017e-10 9.346650429753392 -0.15418212116078556 ASRVPS(ph)S(ph)DEEVVEEPQSR ddPTM_A549_PD325901_60min_R1 2 ASRVPSSDEEVVEEPQSR 18 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 AS(0.316)RVPS(0.842)S(0.842)DEEVVEEPQS(0.001)R;AS(0.148)RVPS(0.926)S(0.925)DEEVVEEPQS(0.002)R 48.641000000000005 0.00591 44491000.0 1016.9300000000001 1379.22 1170.3899999999999 1405.8000000000002 1020.12 1412.8899999999999 1250.85 1302.18 1734.64 1404.0100000000002 1742.92 True False 1120.1679849757018 1495.4517097730102 1249.8197035268101 1492.6330731965536 948.4702904229492 1401.3838922821858 1298.4517812413833 1276.2069983595522 1661.7391131730908 1315.3605689901544 1528.5518892801895 0.7328295446373104 0.9783454001533658 0.8176495101617799 0.9765014087283943 0.6205025142257967 0.9168049198134266 0.8494652947979655 0.8349124470746826 1.087132942510457 0.8605272599607796 1.0 10.577949812442455 -8.754958942850166 24.997201754760184 1.0411461145232253 0.8446767193623432 0.19197848561585074 0.11301292356228496 94.71245206245487 365337.0739287913 0.015782362613855773 0.01768891211724978 1.7580898116608753e-09 8.754958942850166 -0.19646939516088202 ASRVPS(ph)SDEEVVEEPQSR ddPTM_A549_MK2206_60min_R1 2 ASRVPSSDEEVVEEPQSR 18 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 AS(0.002)RVPS(0.842)S(0.156)DEEVVEEPQSR;AS(0.006)RVPS(0.788)S(0.207)DEEVVEEPQSR 142.41 3.2612e-17 19431500.0 970.6100000000001 1275.02 1390.0 829.88 1365.56 1088.53 1030.73 892.03 1916.3 1730.72 1689.06 True False 1134.4252388638279 1339.91307194926 1587.122901273356 1033.2006372547291 1164.6879329463932 1203.7175220922645 1218.0002990147739 1018.477984227303 1482.2611097022839 1339.7491499627563 1269.6197863155003 0.8935157210773993 1.0553656192124685 1.2500773210846576 0.8137874412410733 0.9173517501065224 0.9480929133796131 0.9593425623504744 0.8021913294081346 1.1674842544821071 1.0552365081287642 1.0 10.310180801719728 -8.786144925937446 24.998741459765633 1.0790897667117925 0.9621062903041269 0.15974873892758024 0.12088514395451883 323.96362255473827 327806.7560314558 0.022387834804631628 0.023838840126896722 1.636270399837769e-09 8.786144925937446 -0.1169834764076656 ASRVPS(ph)SDEEVVEEPQSR ddPTM_A549_PD325901_60min_R1 1 ASRVPSSDEEVVEEPQSR 18 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 ASRVPS(0.623)S(0.376)DEEVVEEPQSR 127.54 5.8831e-13 14779000.0 621.78 611.68 608.32 853.56 652.46 903.76 621.41 949.17 831.16 1087.4 1134.7 True False 684.902647869757 663.2284202911467 649.6042533253265 906.2824626245907 606.6334604648052 896.4000782006731 645.0580975985997 930.2380597405393 796.2292356367581 1018.7413784231554 995.1390934559415 0.6882481578441578 0.6664680592417207 0.6527773429836488 0.9107093355937134 0.6095966528237524 0.900778679177033 0.6482089808756557 0.9347819474260503 0.8001185370696223 1.0237175738772832 1.0 9.958754379164057 -14.999999999972344 0.08696494257475422 1.834098869183544 0.5291571107314987 0.540989239022887 0.10044894718451204 74.52979252053504 0.4749232424933296 11.652224002070197 0.9964728065459241 1.0000000000636805e-15 14.999999999972344 -1.3049417584520453 ASRVPSS(ph)DEEVVEEPQSR ddPTM_A549_PD325901_60min_R1 2 ASRVPSSDEEVVEEPQSR 18 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 ASRVPS(0.068)S(0.932)DEEVVEEPQSR;AS(0.218)RVPS(0.218)S(0.565)DEEVVEEPQSR 125.58 2.042e-11 16901000.0 1352.63 1019.0699999999999 1168.5 1117.3200000000002 941.81 1421.8899999999999 1101.25 1154.95 1474.85 1443.21 1439.72 True False 1489.9480018464235 1104.9506053264759 1247.8014367613166 1186.334318782168 875.6605146681155 1410.3105992661262 1143.1586713771228 1131.9136162092532 1412.8671834290305 1352.0854743002399 1262.6435671370305 1.18002264504843 0.8751088859003067 0.988245193844081 0.9395639035900772 0.6935136228932951 1.1169506866169066 0.9053692594887783 0.8964632978535663 1.1189754735238728 1.0708370196396864 1.0 10.302231721493515 -8.756543895519364 24.99663884537621 1.0561828628864953 0.9434821339676722 0.14355169025757886 0.12291850707022312 167.0872985046049 853158.1593549749 0.020162114026029205 0.02251094234986971 1.7516853768695218e-09 8.756543895519364 -0.1127007289188231 ASS(ph)ASVPAVGASAEGTR ddPTM_A549_MK2206_60min_R1 1 ASSASVPAVGASAEGTR 17 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 AS(0.018)S(0.982)ASVPAVGASAEGTR 316.96 2.3499999999999993e-172 37789000.0 4763.1 4688.5 4203.1 4523.5 6154.0 5986.8 5918.8 6112.5 8048.9 8811.7 8769.5 True False 5566.994833385498 4927.124623797352 4799.162781541039 5631.757703067629 5248.754752154505 6620.31920228379 6994.169345811851 6978.965593746162 6225.8370014521315 6821.13085000857 6591.791124112689 0.844534471521936 0.7474637061502134 0.7280514038112892 0.8543592472866336 0.7962562304127971 1.0043278188938278 1.061042319776679 1.0587358522658876 0.9444833557723178 1.0347917161781657 1.0 12.686454812835354 -7.257687863111319 23.36451661022139 0.9894332649922626 0.791214950665595 0.8286512544069995 0.04963639362339098 47.140636984375895 293590.7207570428 0.007871327364155736 0.013290381753130716 5.5247437196730405e-08 7.257687863111319 -0.1982183143266676 ASS(ph)ASVPAVGASAEGTR ddPTM_A549_PD325901_60min_R1 2 ASSASVPAVGASAEGTR 17 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 AS(0.007)S(0.99)AS(0.002)VPAVGASAEGTR;AS(0.001)S(0.887)AS(0.112)VPAVGASAEGTR 281.49 1.5858999999999997e-115 105300000.0 14752.9 15194.1 15075.3 16863.7 16644.5 15109.5 15329.4 16074.4 17644.8 18195.3 19191.1 True False 16250.603547489036 16474.56013069858 16098.400513143235 17905.332448758516 15475.447740407766 14986.453241538757 15912.76870556955 15753.783481877146 16903.250417444855 17046.44565277068 16830.716362406216 0.965532494135963 0.9788389142779947 0.9564893238353946 1.0638485055070268 0.9194764742738084 0.8904227793306004 0.9454599770401317 0.9360138417557465 1.004309623754379 1.0128175940773576 1.0 14.038808962663921 -8.7775471251251 24.73387653063514 1.0020351071728961 0.9574260974361228 0.21710764687701067 0.04101850896191056 259.63415558904836 398673.638039322 0.007309371896650553 0.007793270750213388 1.6689866962886528e-09 8.7775471251251 -0.044609009736773286 ASS(ph)ASVPAVGASAEGTRR ddPTM_A549_MK2206_60min_R1 1 ASSASVPAVGASAEGTRR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 AS(0.317)S(0.672)AS(0.011)VPAVGASAEGTRR 71.946 0.00036469 19128000.0 2147.7 2942.3 2284.4 2056.5 3610.1 2988.7 2520.2 2844.2 4401.2 4597.8 4067.4 True False 2510.1792537763313 3092.0505024205936 2608.362270265363 2560.3425923197938 3079.0590722705515 3304.9622502615002 2978.0877180028065 3247.374059997191 3404.335227272188 3559.15378668922 3057.3523254707748 0.8210304166988052 1.0113490933513776 0.8531441563130033 0.837437861181259 1.007099851272926 1.0809883514987426 0.9740741010423903 1.0621523835978428 1.1134913038679586 1.1641294191179543 1.0 11.578067100845267 -6.907337037605458 5.135962292246089 1.050424158531524 0.8889043092032269 0.6166256992014769 0.06746693955438937 0.11166988963611525 4.879538700007765 0.009140599331153238 0.01753683015736099 1.237835581764603e-07 6.907337037605458 -0.161519849328297 ASS(ph)ASVPAVGASAEGTRR ddPTM_A549_PD325901_60min_R1 1 ASSASVPAVGASAEGTRR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 AS(0.064)S(0.873)AS(0.064)VPAVGASAEGTRR 93.255 1.7362e-06 22486000.0 4193.2 4366.5 4528.7 5060.7 5189.8 5016.7 4420.9 5314.9 5944.0 6297.2 5575.2 True False 4618.890577129309 4734.48027923308 4836.0448152853905 5373.287945316401 4825.286351838038 4975.845658481584 4589.139768709304 5208.890150041609 5694.194350816796 5899.593717313124 4889.485744104671 0.9446577449782685 0.9682982070131848 0.98907023527296 1.0989474612529668 0.9868699091015781 1.0176623716473738 0.9385730951854193 1.0653247442887115 1.1645793952221613 1.2065877734537536 1.0 12.255467021118877 -8.434402787230717 8.25098994873053 1.0796343591363955 0.9960896626856967 0.39844125605857184 0.06577084493399821 0.35869015823384576 30.595710709880763 0.011527136260112326 0.013930765019203489 3.677877100136435e-09 8.434402787230717 -0.08354469645069884 ASS(ph)DGEGTMSR ddPTM_A549_PD325901_60min_R1 2 ASSDGEGTMSR 11 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(0.038)S(0.96)DGEGT(0.001)MS(0.001)R;AS(0.142)S(0.858)DGEGTMSR 62.166000000000004 0.0026278 20637200.0 830.52 843.94 1178.08 1213.08 818.1600000000001 750.22 959.1199999999999 940.75 891.1800000000001 995.76 1232.72 True False 914.8337790034901 915.0617856076877 1258.0315931705363 1288.0091964954283 760.6952640987727 744.110457054648 995.6198364506022 921.9860032459023 853.7268037619301 932.8875436625351 1081.1032548559162 0.8462038893088102 0.846414791091941 1.16365535624828 1.191384070587307 0.70362868734509 0.6882880554770128 0.920929459770513 0.8528195610407072 0.7896810965347711 0.8629032791015558 1.0 10.078288604362408 -6.765207388648858 24.99999713169158 0.8687172061272698 1.010931731809717 0.27173864906185075 0.1336182412995588 136.77890281483488 907509.658835484 0.02190271031589351 0.0425538751847776 1.7170882301863963e-07 6.765207388648858 0.1422145256824473 ASS(ph)DGEGTMSRPASVDGSPVS(ph)PSTNR ddPTM_A549_MK2206_60min_R1 2 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 2 AS(0.147)S(0.72)DGEGT(0.056)MS(0.066)RPAS(0.012)VDGS(0.092)PVS(0.887)PS(0.011)T(0.01)NR;AS(0.157)S(0.84)DGEGT(0.001)MS(0.001)RPASVDGS(0.015)PVS(0.943)PS(0.035)T(0.007)NR 94.50299999999999 2.7418e-09 12974600.0 945.3199999999999 1220.4299999999998 1203.93 985.69 1560.29 1355.3400000000001 1039.35 1114.5700000000002 1847.87 1586.87 1519.56 True False 1104.866905144965 1282.5446741220017 1374.6653773597347 1227.184094249305 1330.7734079036645 1498.7611791981221 1228.186441435687 1272.5637107274695 1429.3303954420294 1228.3949648709204 1142.2113142775165 0.9673051661581789 1.1228611186829736 1.2035123100047844 1.0743932220856491 1.165085121526238 1.3121575320291188 1.0752707717770702 1.1141228377101173 1.2513712459118167 1.0754533329482185 1.0 10.157613865186022 -5.267846350933113 5.079063073572211 1.135784069767859 0.960081500989737 0.25212823247637994 0.08523499069872537 0.21114120059136152 17.39104698230283 0.014136299358842804 0.12857881996305837 5.397015297743171e-06 5.267846350933113 -0.17570256877812196 ASS(ph)DGEGTMSRPASVDGSPVS(ph)PSTNR ddPTM_A549_PD325901_60min_R1 2 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 2 AS(0.375)S(0.605)DGEGT(0.01)MS(0.011)RPAS(0.008)VDGS(0.203)PVS(0.563)PS(0.116)T(0.109)NR;AS(0.472)S(0.527)DGEGTMSRPASVDGS(0.124)PVS(0.5)PS(0.322)T(0.053)NR 98.883 6.4609e-10 14408300.0 880.5899999999999 1383.08 1366.08 699.1300000000001 961.75 1284.03 1358.98 1281.5700000000002 1407.66 988.19 1209.7399999999998 True False 969.986848543904 1499.6370055196821 1458.7904037063747 742.3136722605677 894.1999978573808 1273.57328539879 1410.6967275623897 1256.008080977785 1348.5009454695112 925.7955147544394 1060.9496491736945 0.9142628486652165 1.4134855567251972 1.3749855187213953 0.6996690868776931 0.8428298162441693 1.2004087907382732 1.3296547377729855 1.183852675719351 1.2710319914990988 0.872610227521619 1.0 10.051140474740313 ASS(ph)DGEGTMSRPASVDGSPVSPSTNR ddPTM_A549_MK2206_60min_R1 1 ASSDGEGTMSRPASVDGSPVSPSTNR 26 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 AS(0.211)S(0.787)DGEGTMS(0.002)RPASVDGSPVSPSTNR 86.26100000000001 7.5532e-08 9477900.0 1444.5 1528.8 1626.7 1036.1 2007.7 1535.0 1276.3 1434.7 2453.3 2329.7 1772.0 True False 1688.2962853656968 1606.6093899672385 1857.3905205045808 1289.944546512296 1712.369989584108 1697.4326811494655 1508.187189305208 1638.0731185844768 1897.6314671150722 1803.4191519530789 1331.963495287951 1.2675244414267615 1.2061962626234837 1.3944755446192165 0.9684533780960933 1.285598288272847 1.2743837854073512 1.132303696490691 1.2298183278891959 1.4246872934793398 1.3539553886671691 1.0 10.379338828115763 -11.0886761552849 1.43323899055671 1.000721706455635 1.26063136686896 0.0 0.15607793494273664 0.35586639368648 1.3118690306651073 0.08744086469850633 0.019394179849942145 8.153120192821533e-12 11.0886761552849 0.25990966041332486 ASS(ph)EDTLNKPGSTAASGVVR ddPTM_A549_MK2206_60min_R1 2 ASSEDTLNKPGSTAASGVVR 20 1 Q5M775;Q5M775-2;J3QS22;J3KRD8;J3KRB9;J3KTI9;J3QRQ9 Q5M775 SPECC1 Cytospin-B 1 AS(0.013)S(0.987)EDTLNKPGSTAASGVVR;AS(0.112)S(0.87)EDT(0.018)LNKPGSTAASGVVR 240.96 5.727399999999999e-86 80303000.0 15208.2 18214.2 16740.5 14583.0 22456.1 15903.4 14193.699999999999 15465.099999999999 25227.7 24161.8 25667.0 True False 17774.972355208458 19141.224980861633 19114.55462501195 18155.83565465574 19152.83743741579 17586.28723217746 16772.51156377131 17657.32528488242 19513.666230358675 18703.632598901113 19293.175526837374 0.9213087980505308 0.9921241298113743 0.9907417572821563 0.9410496281133419 0.992726024327806 0.9115289086399705 0.8693494515944383 0.9152109387239318 1.0114284298722411 0.9694429293344587 1.0 14.235803000374146 -8.774386376939711 24.951616315823834 1.0053967650340525 0.9433212936256321 0.25128879039586993 0.038366562391575036 185.4840067618269 357465.81480890396 0.006866488195263054 0.007332597698711152 1.6811777092618514e-09 8.774386376939711 -0.0620754714084204 ASS(ph)EDTLNKPGSTAASGVVR ddPTM_A549_PD325901_60min_R1 2 ASSEDTLNKPGSTAASGVVR 20 1 Q5M775;Q5M775-2;J3QS22;J3KRD8;J3KRB9;J3KTI9;J3QRQ9 Q5M775 SPECC1 Cytospin-B 1 AS(0.147)S(0.853)EDTLNKPGSTAASGVVR;AS(0.162)S(0.838)EDTLNKPGSTAASGVVR 196.02 3.0579999999999998e-55 101128000.0 11987.900000000001 11630.7 13302.2 12640.400000000001 13750.3 13517.900000000001 12771.2 13305.900000000001 13699.1 14036.1 14516.9 True False 13204.902782974457 12610.859906945201 14204.967284626779 13421.16879956873 12784.526363959794 13407.814704245468 13257.215004668797 13040.50338622338 13123.374466903497 13149.858250584195 12731.413330211131 1.0371906433702656 0.9905310258854089 1.1157415847083498 1.0541774468762897 1.0041718097096595 1.053128537774299 1.0412995525964082 1.0242777489030845 1.0307869304472472 1.0328671224097414 1.0 13.636104963070443 -10.165460574691448 0.36881678192658035 0.992082484033101 1.0444667308944755 0.05166359009711807 0.031555797751410174 2.306636963893528 0.5350368027923472 0.04751749869169639 0.011761518656890787 6.83186734943378e-11 10.165460574691448 0.05238424686137455 ASS(ph)ESQGLGAGVR ddPTM_A549_MK2206_60min_R1 2 ASSESQGLGAGVR 13 0 Q9BV36-2;H7C2D8;Q9BV36-3 Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 AS(0.005)S(0.995)ESQGLGAGVR;AS(0.013)S(0.98)ES(0.007)QGLGAGVR 291.77 1.1633999999999999e-115 210979000.0 5016.7 8047.5 6965.1 7642.6 10477.2 9864.7 8293.400000000001 9522.7 12971.4 13527.7 14015.2 True False 5863.396313460778 8457.08337634834 7952.855913423777 9515.03734308935 8936.017759062917 10908.5760063421 9800.20342849158 10872.571887045653 10033.398611069351 10471.783174604318 10534.839040157836 0.5565719885334794 0.8027729084526795 0.754910054449643 0.903197220842094 0.8482348638645204 1.0354762863257438 0.9302660810605751 1.0320586622729033 0.9524016999996829 0.9940145392527445 1.0 13.362880651204426 -4.606983165092169 0.48126439797441534 0.9848377667110263 3.4037758423521105e-20 0.8546498480117849 0.052512812903434666 1.787124150223759 0.1751310014840669 0.009350082118037477 1.1473015133487265 2.4718199603129275e-05 4.606983165092169 -0.9848377667110263 down ASS(ph)ESQGLGAGVR ddPTM_A549_PD325901_60min_R1 2 ASSESQGLGAGVR 13 0 Q9BV36-2;H7C2D8;Q9BV36-3 Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 ASS(0.999)ESQGLGAGVR;AS(0.056)S(0.943)ES(0.001)QGLGAGVR 315.41 1.3730999999999994e-155 297480000.0 15327.8 17899.1 15688.9 17009.6 18937.6 18630.9 17076.9 20472.8 17733.3 20892.8 19873.2 True False 16883.866972270018 19407.51997389691 16753.64309901979 18060.24436039556 17607.48830717332 18479.176127455205 17726.770774338253 20064.45394339909 16988.031070211902 19573.625042412437 17428.922386594368 0.9687269584295364 1.1135238050531684 0.9612552473069721 1.0362226625259852 1.0102453792964445 1.0602592471046086 1.0170893174653746 1.1512159787246439 0.9747034666514103 1.1230542318248942 1.0 14.089195751332204 ASS(ph)ESQIFELNK ddPTM_A549_MK2206_60min_R1 4 ASSESQIFELNK 12 0 Q9BV36;Q9BV36-4 Q9BV36 MLPH Melanophilin 1 AS(0.005)S(0.989)ES(0.006)QIFELNK;ASS(0.85)ES(0.15)QIFELNK;ASS(1)ESQIFELNK;AS(0.018)S(0.965)ES(0.018)QIFELNK 297.77 2.369399999999999e-114 207555000.0 40522.6 45243.2 44117.7 40529.9 59915.7 51342.1 47945.2 46831.0 74115.9 69936.9 69300.7 True False 47361.82419754931 47545.88563066832 50374.25325288308 50459.72731945635 51102.17989984787 56775.086943872295 56656.22222727889 53469.43766392252 57328.76698877182 54138.10571671349 52091.42358798066 0.9092057950299013 0.9127392256877934 0.9670354500449131 0.9686762972455836 0.9810094710415815 1.0899123700848967 1.0876305219723634 1.0264537611189382 1.100541375912783 1.039290193812347 1.0 15.668758244076265 -6.716849275475892 1.364159048094945 1.052343117229539 0.9234713445175206 0.7369308610021754 0.03308963816117734 0.21598680316514662 0.7980443598945096 0.006616466831268935 0.01852803004472462 1.9193347418132024e-07 6.716849275475892 -0.12887177271201844 ASS(ph)ESQIFELNK ddPTM_A549_PD325901_60min_R1 2 ASSESQIFELNK 12 0 Q9BV36;Q9BV36-4 Q9BV36 MLPH Melanophilin 1 AS(0.002)S(0.996)ES(0.002)QIFELNK;AS(0.001)S(0.996)ES(0.003)QIFELNK 330.26 1.2302999999999996e-172 329920000.0 33942.0 34145.0 33974.0 35079.0 39409.0 34705.0 37272.0 38048.0 41442.0 39837.0 43782.0 True False 37387.76685322025 37022.518981887915 36279.67994225844 37245.75015981069 36641.047793669386 34422.3739864061 38690.406356021 37289.10279192144 39700.336858437055 37321.68502137505 38397.091556964886 0.9737135115495081 0.9642011277589165 0.9448548958046702 0.9700148800216782 0.954266229756223 0.89648388955028 1.0076389848075071 0.9711439403320519 1.0339412504600436 0.9719925001612586 1.0 15.22870941561944 -8.237745469851399 1.8849571873398812 1.014997295593991 0.9533855597535471 0.26885563737568474 0.029067841975568113 0.19716462449907834 1.3677271627057994 0.004521179978824486 0.005871063722392146 5.78434955694818e-09 8.237745469851399 -0.06161173584044388 ASS(ph)ESSYLSILPK ddPTM_A549_MK2206_60min_R1 2 ASSESSYLSILPK 13 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AS(0.095)S(0.502)ES(0.192)S(0.192)YLS(0.018)ILPK;AS(0.057)S(0.79)ES(0.076)S(0.076)YLSILPK 119.76 1.1612e-05 2197540.0 2293.7 1778.83 1732.02 1777.4700000000003 3338.5 2241.71 1720.27 2342.3 3324.2 2666.1 3354.6 True False 2680.820484419038 1869.364849002761 1977.6464801895527 2212.9502297936615 2847.4110724842085 2478.926264273334 2032.8207914644436 2674.3281979929047 2571.2740076565965 2063.826158313134 2521.5602377499777 1.0631594059443017 0.7413524456075737 0.7842947594836098 0.8776114869927941 1.1292258776355832 0.9830922248699929 0.8061757799918186 1.06058469591797 1.0197154797899965 0.8184718839613024 1.0 11.3001009750238 -6.551072747854402 21.92902830643651 1.002755776039856 0.8474731950819636 0.12923502386553332 0.11847464982115861 44.9713301248954 34977.99052450858 0.013997209114771769 0.029138738770691817 2.811429853610213e-07 6.551072747854402 -0.15528258095789238 ASS(ph)FADMMGILK ddPTM_A549_MK2206_60min_R1 3 ASSFADMMGILK 12 0 E9PPF9;E9PLD2;Q9H019-3;Q9H019 E9PPF9 MTFR1L Mitochondrial fission regulator 1-like 1 AS(0.096)S(0.904)FADMMGILK;AS(0.108)S(0.892)FADMMGILK;AS(0.136)S(0.864)FADMMGILK 57.019 0.004278499999999999 8577300.0 4965.0 5656.7 6134.6 5435.1 7295.1 6163.2 5590.16 6744.5 9782.099999999999 8791.7 8563.0 True False 5802.970617404426 5944.601868280794 7004.578525288868 6766.699743990909 6222.000453760531 6815.385733198946 6605.819711796914 7700.553529164988 7566.469968803792 6805.648863899172 6436.5707732227565 0.9015624657691613 0.9235666129876738 1.0882469519995215 1.0512895736564485 0.9666638763058623 1.058853537593671 1.0262948928143947 1.196375181828283 1.1755436606525964 1.057340795849219 1.0 12.652076549689639 -7.613905888352363 1.87788690623807 1.0927548937058094 0.992009468015661 0.3279450987831891 0.07241086920672529 0.412736704546913 2.9504738599218263 0.014362631390263371 0.023236440164100834 2.4327311249806467e-08 7.613905888352363 -0.10074542569014833 ASS(ph)FADMMGILK ddPTM_A549_PD325901_60min_R1 1 ASSFADMMGILK 12 0 E9PPF9;E9PLD2;Q9H019-3;Q9H019 E9PPF9 MTFR1L Mitochondrial fission regulator 1-like 1 AS(0.108)S(0.892)FADMMGILK 71.555 0.00068723 9775000.0 2856.6 2619.0 2454.8 2615.4 3640.7 2496.9 2779.5 3410.6 2802.4 2767.5 3923.1 True False 3146.5999290822283 2839.7123213813006 2621.3974899115788 2776.9473179956367 3384.989791733161 2476.566074244558 2885.275393500761 3342.5729074360597 2684.624873608513 2592.7595776954936 3440.5835705798954 0.9145541343592135 0.8253577519998095 0.7619049025074992 0.8071152061938127 0.9838417589033117 0.7198098878985065 0.8386005845556195 0.9715133607037144 0.7802818383963949 0.7535813400569413 1.0 11.748437571385223 -10.943507977102252 1.0811134149608468 1.004406293601993 0.8388802059464744 0.0 0.10728643224527498 0.47458666031462715 0.9408350759294603 0.06210741457400914 0.012996886965166855 1.1389168621079383e-11 10.943507977102252 -0.16552608765551868 ASS(ph)FDSSR ddPTM_A549_MK2206_60min_R1 2 ASSFDSSR 8 0 Q96RV3-4;Q96RV3-2;Q96RV3-3;Q96RV3 Q96RV3-4 PCNX Pecanex-like protein 1 1 AS(0.026)S(0.974)FDSSR;AS(0.045)S(0.955)FDSSR 126.55 0.0010738 28035000.0 2709.35 3075.4799999999996 2767.11 2673.32 4057.5 2756.28 2649.75 2694.76 4400.3 3786.3999999999996 4096.3 True False 3166.6220427522007 3232.008795562819 3159.5278067212334 3328.283520009896 3460.6471249377482 3047.9477201294108 3131.175276080446 3076.7504823563863 3403.6390758351827 2931.0496102309926 3079.0756578713535 1.028432683898833 1.0496685222074706 1.0261286690517695 1.080935933321894 1.1239240309314729 0.9898904927320096 1.0169205384985929 0.9992448462547443 1.1054093676243761 0.9519251671319128 1.0 11.588281601832016 -11.22516490066578 1.693319021062841 0.9999818007252019 1.0551599516477195 0.22688678819223684 0.04361385773181103 0.5452639093289429 2.8175056634542615 0.032814067498111124 0.006768755182312088 5.954360148477241e-12 11.22516490066578 0.055178150922517544 ASS(ph)FDSSR ddPTM_A549_PD325901_60min_R1 2 ASSFDSSR 8 0 Q96RV3-4;Q96RV3-2;Q96RV3-3;Q96RV3 Q96RV3-4 PCNX Pecanex-like protein 1 1 AS(0.18)S(0.819)FDSSR;AS(0.043)S(0.957)FDSSR 135.43 0.0010827999999999999 35321000.0 3098.6 3251.3900000000003 3540.4 3307.1 3940.2 3441.1 3621.0 3949.5 3403.8 3837.8 3662.8 True False 3413.1675909312435 3525.396046054199 3780.6728341546986 3511.372056030959 3663.453944952069 3413.076822493069 3758.799136487231 3870.7241241771862 3260.750123033349 3595.4806530369533 3212.2988204022436 1.062531159695737 1.097468275262371 1.1769368435285492 1.0931025574984539 1.140446188157966 1.0625029031594526 1.1701274839731612 1.2049701290530919 1.0150830621122098 1.1192858616393377 1.0 11.649390388806296 -8.86297657742585 8.69522205043086 1.006703402989936 1.1254067612439795 0.23041812769607906 0.055340429455115914 0.12456439017790202 9.686203000356523 0.007456605359815552 0.007926810426693168 1.3709557031984697e-09 8.86297657742585 0.11870335825404355 ASS(ph)FSGISILTR ddPTM_A549_MK2206_60min_R1 2 ASSFSGISILTR 12 0 H7C0E9;B5MCU0;A0A0U1RRA6;B5MCG9;Q9Y2K5-3;Q9Y2K5-2;Q9Y2K5;H0YIX9 H7C0E9 R3HDM2 R3H domain-containing protein 2 1 AS(0.002)S(0.998)FSGISILTR;AS(0.003)S(0.991)FS(0.007)GISILTR 210.4 1.8660999999999997e-31 19655000.0 3373.2 6005.3 3887.7 3366.3 6359.4 4567.5 2482.1 4124.1 5157.1 5215.5 4932.700000000001 True False 3942.5136931779657 6310.944119289808 4439.034318906782 4191.043651118948 5423.94068424624 5050.829818338878 2933.065441177197 4708.70380452655 3989.0250841964453 4037.3149276779363 3707.774454405689 1.0633100102659567 1.702084146944525 1.1972233946517938 1.1303394266981435 1.4628561556114479 1.362226823785716 0.7910582149062602 1.269954217126537 1.0758542983801418 1.0888782414692666 1.0 11.856337771503869 -7.727251643416412 24.999915302022398 1.0413264961926862 1.3293921087279468 0.3355428807973364 0.1920574206891008 147.73149429761963 108028.96068758894 0.027019057349389797 0.040074627199874945 1.8739083939824106e-08 7.727251643416412 0.28806561253526053 ASS(ph)FSGISILTR ddPTM_A549_PD325901_60min_R1 2 ASSFSGISILTR 12 0 H7C0E9;B5MCU0;A0A0U1RRA6;B5MCG9;Q9Y2K5-3;Q9Y2K5-2;Q9Y2K5;H0YIX9 H7C0E9 R3HDM2 R3H domain-containing protein 2 1 AS(0.054)S(0.892)FS(0.054)GISILTR;AS(0.002)S(0.997)FS(0.001)GISILTR 243.85 7.1087e-51 46407000.0 9569.7 10039.7 8967.5 8173.099999999999 12478.8 11473.7 11201.8 10371.2 10164.099999999999 9840.0 11169.5 True False 10541.20889915921 10885.780753330218 9576.088475958155 8677.93382454314 11602.332137522928 11380.261991293106 11628.090628860158 10164.33827995099 9736.938223609857 9218.700720695091 9795.722309294219 1.0761032791995002 1.1112790266626635 0.9775785974325064 0.8858901416906729 1.1844284444971036 1.1617583300105874 1.1870580097832482 1.0376303001471396 0.9939990044809063 0.941094533881218 1.0 13.257936161393445 -8.519808958144244 16.644527496641828 0.9981469512285885 1.0820681531051306 0.21413303894846536 0.0860334900846838 2.400580774314582 13011.851364198892 0.01497131595944221 0.01724777350555779 3.0212804595826838e-09 8.519808958144244 0.08392120187654206 ASS(ph)FSGISVLTR ddPTM_A549_MK2206_60min_R1 2 ASSFSGISVLTR 12 0 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C1X4;H7BZ47;H7C207 Q15032-2 R3HDM1 R3H domain-containing protein 1 1 AS(0.01)S(0.99)FSGISVLTR;AS(0.002)S(0.985)FS(0.012)GISVLTR 251.75 9.109399999999998e-63 16415800.0 3111.7 4051.3 3341.6000000000004 3354.3 4433.0 3441.1 2846.0 3605.8 4374.2 5066.6 4109.9 True False 3636.878886239141 4257.493865498608 3815.4891272626205 4176.103650580249 3780.911572359589 3805.234917982687 3363.0813607793 4116.933192299371 3383.450684162046 3922.0515410934804 3089.298402530445 1.1772507580556715 1.378142643006352 1.2350665523723292 1.3517967856907582 1.2238738638076023 1.231747284388526 1.0886230213386314 1.332643421214082 1.0952165324627303 1.2695606024594217 1.0 11.593063515633629 -8.89507773421612 0.4563802899063387 0.9956041974322809 1.2908530679257753 0.0 0.11349713048228778 0.3799679004374889 0.1957772417880304 0.03680227734587405 0.031186594286544935 1.2732751575479946e-09 8.89507773421612 0.29524887049349435 ASS(ph)FSGISVLTR ddPTM_A549_PD325901_60min_R1 2 ASSFSGISVLTR 12 0 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C1X4;H7BZ47;H7C207 Q15032-2 R3HDM1 R3H domain-containing protein 1 1 AS(0.002)S(0.996)FS(0.002)GISVLTR;AS(0.07)S(0.739)FS(0.191)GISVLTR 205.02 4.672000000000001e-25 27992000.0 4240.8 5102.9 4067.3999999999996 4477.7 5074.4 4477.4 4693.4 5104.5 4661.8 4342.2 4934.6 True False 4671.3228940880435 5532.939291629107 4343.43822326314 4754.277359405465 4717.991649729652 4440.937538877238 4872.009905327024 5002.686743097219 4465.88075784619 4068.03275095551 4327.675483006693 1.0794069269821032 1.2785014295445845 1.0036423110555173 1.0985752924575543 1.0901907197652867 1.0261715686204491 1.1257798613730967 1.1559754798484927 1.0319352214328874 0.9400041123529914 1.0 12.079376605312483 -2.0000013836785553 0.041268858743750574 0.7234664884874816 1.6943629668016909 0.32063372931530876 0.07225454272532394 490.78087292413784 1.4985647642218063 9.362216078423696 32.509388733085935 0.009999968139674605 2.0000013836785553 0.9708964783142092 ASS(ph)HSS(ph)QTQGGGSVTK ddPTM_A549_MK2206_60min_R1 3 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.149)S(0.769)HS(0.249)S(0.749)QT(0.084)QGGGSVTK;AS(0.006)S(0.994)HS(0.015)S(0.977)QT(0.008)QGGGSVTK;AS(0.014)S(0.874)HS(0.118)S(0.992)QT(0.002)QGGGSVTK 162.29 1.7096000000000002e-20 82889000.0 3577.33 3671.8499999999995 3419.41 3107.7200000000003 3712.2 3296.06 3024.7799999999997 4342.9400000000005 6827.599999999999 7870.299999999999 7158.9 True False 4181.095846678624 3858.7314812605982 3904.3337552828216 3869.1115395108536 3166.140297521606 3644.8468814524463 3574.3433726134963 4958.5650446959435 5281.1595014367895 6092.393763839263 5381.147554411349 0.7769896298887125 0.7170833808668363 0.7255578323776185 0.7190123482748655 0.588376413303529 0.677336357086971 0.6642344103133404 0.9214698156029969 0.9814188234082911 1.1321737050017981 1.0 12.393698151592089 -8.375018139471267 3.5454203846708725 0.9900608420777088 0.6933029658823162 0.8552257413829403 0.06228912362524755 0.05301225150596865 1.2311975208332484 0.007923022400472789 0.009664508539579796 4.2167889051342765e-09 8.375018139471267 -0.2967578761953926 ASS(ph)HSS(ph)QTQGGGSVTK ddPTM_A549_PD325901_60min_R1 4 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.165)S(0.835)HSS(0.999)QT(0.001)QGGGSVTK;AS(0.08)S(0.92)HS(0.246)S(0.754)QT(0.001)QGGGSVTK;AS(0.37)S(0.595)HS(0.195)S(0.75)QT(0.09)QGGGS(0.001)VTK;AS(0.088)S(0.886)HS(0.157)S(0.856)QT(0.012)QGGGSVTK 207.85 5.4136999999999996e-46 76271300.0 6356.700000000001 6842.14 6199.889999999999 6976.23 9053.33 7488.2300000000005 7326.74 8203.61 8402.59 8377.119999999999 7016.120000000001 True False 7002.0275044447935 7418.751150292414 6620.65181836724 7407.135882932125 8417.45533309297 7427.248337594745 7605.563100045964 8039.982562942456 8049.458363093835 7848.187213551752 6153.181718849125 1.1379523349676781 1.2056772397224111 1.0759720939308695 1.2037895549617437 1.3679841938208432 1.2070581817603003 1.236037459571158 1.3066382451071563 1.308178228904864 1.2754681353730046 1.0 12.5871168842238 -10.876115555348026 1.1285546275153369 1.0001966975668402 1.2336176664324783 0.0 0.11085023278813945 0.3171028386301356 0.7180756583698961 0.05761359832270951 0.013951659558410451 1.3301004630509437e-11 10.876115555348026 0.23342096886563812 ASS(ph)HSS(ph)QTQGGGSVTKK ddPTM_A549_PD325901_60min_R1 1 ASSHSSQTQGGGSVTKK 17 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.117)S(0.873)HS(0.113)S(0.503)QT(0.392)QGGGS(0.001)VTKK 66.874 0.00052177 4670500.0 818.85 720.57 805.64 965.69 1071.5 1046.4 879.06 1035.4 909.43 840.1 1017.2 True False 901.9790491944906 781.2949627406352 860.3155751068783 1025.3384780588835 996.2415364743267 1037.8784653328137 912.5131093400895 1014.7481347444134 871.2098197280145 787.0559426276368 892.0908485620727 1.0110842978025796 0.8758020150077482 0.9643811238435954 1.1493655379511938 1.1167489702199396 1.1634223879840608 1.0228925796189197 1.1374941648376367 0.9765931587935068 0.882259854919779 1.0 9.801046828279018 -2.1778298987810967 18.375477173749424 1.0195923274950514 0.01285589076335758 0.0 0.09805779092091953 0.0 0.0 0.012428292987748708 0.0 0.006640030912483791 2.1778298987810967 -1.0067364367316938 ASS(ph)HSSQTQGGGSVTK ddPTM_A549_MK2206_60min_R1 1 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.142)S(0.832)HS(0.016)S(0.009)QT(0.001)QGGGSVTK 55.213 0.012607 3671000.0 156.61 429.28 161.34 243.04 0.0 416.02 309.94 411.19 510.19 690.82 502.24 True False 183.0419392531131 451.1285183968707 184.22043805139796 302.5848109104802 0.0 460.04296026827404 366.25208607165735 469.477441716562 394.63277960601613 534.7632822046729 377.51994688116287 0.4848536898918661 1.1949792908263959 0.48797537606506275 0.8015068168192155 0.0 1.2185924586736818 0.9701529391954157 1.2435831420169856 1.0453296120277324 1.4165166281213948 1.0 8.560409063368136 ASS(ph)KGGGGYTCQSGSGWDEFTK ddPTM_A549_MK2206_60min_R1 1 ASSKGGGGYTCQSGSGWDEFTK 22 1 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 AS(0.244)S(0.756)KGGGGYT(0.001)CQSGSGWDEFTK 117.03 1.5790999999999998e-15 5253900.0 2766.4 2612.5 1980.5 1641.9 2693.8 2336.7 2614.7 2050.2 3445.8 3334.4 3455.8 True False 3233.3006880136154 2745.4650911102876 2261.3646805553085 2044.165573707692 2297.545588455283 2583.9680430240755 3089.7571447749956 2340.822128474172 2665.331801811892 2581.1567241586254 2597.6294847720656 1.2447120372508893 1.0569117371068006 0.8705493581020608 0.7869350058162977 0.8844777909721355 0.9947408043263766 1.1894526001063284 0.9011378036000283 1.026063115404531 0.9936585411006429 1.0 11.342979950011994 -7.5140521461451595 24.90286593802086 1.017961699398808 0.9562186200499788 0.033818488914181266 0.1274028390521352 1139.786709805571 3215731.535981742 0.019587544567502353 0.029923771870249898 3.061595802944987e-08 7.5140521461451595 -0.06174307934882928 ASS(ph)LDDLR ddPTM_A549_MK2206_60min_R1 2 ASSLDDLR 8 0 Q96P11-2;Q96P11-5;Q96P11;Q96P11-4;Q96P11-3 Q96P11-2 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase 1 AS(0.116)S(0.884)LDDLR;AS(0.086)S(0.914)LDDLR 109.71 0.0016509 5902000.0 935.8399999999999 1186.94 964.21 1238.61 1451.56 1126.52 1192.43 935.53 1476.9299999999998 1762.27 1720.98 True False 1093.786912908712 1247.3501761693578 1100.9494767171095 1542.0695056033164 1238.037446869904 1245.7275986765446 1409.0790959360722 1068.1442424404652 1142.4077131725694 1364.1719830503296 1293.613169368318 0.8455285852128556 0.9642373823222975 0.8510654520119892 1.1920638581287184 0.9570383760660445 0.9629830834861117 1.0892584655922584 0.8257060671097286 0.8831138552264558 1.0545439821986862 1.0 10.337190555727343 -4.771290787482183 1.5631479945867948 0.9590768707369339 0.5891968736331606 0.09415663467938529 0.10333235951238827 8.683015318576054 6.839430389356188 0.014042208898432305 7.205028786341544 1.6932037143926623e-05 4.771290787482183 -0.3698799971037733 ASS(ph)LDDLR ddPTM_A549_PD325901_60min_R1 2 ASSLDDLR 8 0 Q96P11-2;Q96P11-5;Q96P11;Q96P11-4;Q96P11-3 Q96P11-2 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase 1 AS(0.144)S(0.856)LDDLR;AS(0.201)S(0.799)LDDLR 115.71 0.0012999 8224500.0 1356.95 1198.98 1022.41 1023.16 1241.31 1210.21 1523.24 1169.75 1431.1 1332.71 1689.13 True False 1494.706565066208 1300.022252420676 1091.7968908507814 1086.3582694350446 1154.1246678870245 1200.3544510038464 1581.2077317489109 1146.418418598877 1370.9558437843075 1248.562463158289 1481.3777182772858 1.008997601776016 0.8775764859839322 0.7370145219414038 0.7333431953454689 0.7790887183244336 0.8102960076919172 1.0673899790984562 0.77388663570022 0.9254600139244774 0.8428386951912974 1.0 10.532723827251575 -7.724549764624868 24.93044934979498 0.9535453973368411 0.8166350098206385 0.15079984780866762 0.10264004110559416 156.48468691761053 105753.92835835043 0.015170657780784087 0.022501365466402235 1.885602890997906e-08 7.724549764624868 -0.13691038751620255 ASS(ph)LEDLVLK ddPTM_A549_MK2206_60min_R1 2 ASSLEDLVLK 10 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 AS(0.029)S(0.971)LEDLVLK;AS(0.011)S(0.989)LEDLVLK 236.06 2.1817e-45 1406610000.0 89765.0 96932.0 87414.0 82394.0 117302.0 91523.0 87377.0 90093.0 130271.0 133944.0 132474.0 True False 104915.13745645659 101865.42476995304 99810.61963446696 102580.5336988072 100047.03118901956 101207.90311194948 103252.26987379229 102863.95864824094 100764.82650003981 103685.95737185208 99577.04970359821 1.0536076110785344 1.0229809486539962 1.0023456201159202 1.0301624119628887 1.0047197771657255 1.0163778040543043 1.036908305489405 1.03300869984024 1.011928218399492 1.0412636012061462 1.0 16.603525651018465 -9.192319766528232 1.8631536539379594 1.0039139559901948 1.0236444270879572 0.0 0.017927975543864383 0.29645923189501133 2.126217020806688 0.0029000775553384567 0.0026807380637197125 6.422146871732346e-10 9.192319766528232 0.01973047109776238 ASS(ph)LEDLVLK ddPTM_A549_PD325901_60min_R1 3 ASSLEDLVLK 10 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 AS(0.027)S(0.973)LEDLVLK;AS(0.022)S(0.978)LEDLVLK;AS(0.09)S(0.91)LEDLVLK 248.56 1.1980999999999996e-91 559744430.0 32795.0 32755.8 30363.93 31053.9 36624.8 31853.71 31565.56 34886.44 35018.2 36300.8 39147.9 True False 36124.32425759702 35516.24622249008 32424.60888294398 32972.02887447606 34052.40039670078 31594.30394682387 32766.804659137197 34190.602586317276 33546.506833070795 34008.76129286673 34332.956478984655 1.0521763332472946 1.0344651281118107 0.9444164502055399 0.9603608968152328 0.9918283739282516 0.9202325458386572 0.9543834268742307 0.9958537246055545 0.9770934482034703 0.9905573181174663 1.0 15.06730647552559 -5.625702863115088 6.36974749846462 0.9785908592835407 1.0477118427117385 0.5538007871029077 0.024511534140742267 0.12333835097650761 6.4496071304083475 0.0036583038946226636 0.0145560660991402 2.3675389733090074e-06 5.625702863115088 0.06912098342819772 ASS(ph)LGEIDESSELR ddPTM_A549_MK2206_60min_R1 2 ASSLGEIDESSELR 14 0 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AS(0.021)S(0.979)LGEIDESSELR;AS(0.003)S(0.997)LGEIDESSELR 296.22 8.562799999999996e-117 216830000.0 5492.2 4330.7 4230.4 3711.7 5351.0 3799.6 3342.65 3514.8100000000004 6024.1 5019.2 5976.5 True False 6419.149088601924 4551.114132084716 4830.334332048059 4621.066666624542 4563.874988426839 4201.671150029649 3949.9662370375727 4013.0450811541828 4659.6509685109495 3885.3592340142072 4492.37010699122 1.4289003211494455 1.013076399249046 1.0752307171955588 1.028647808744217 1.015916961366193 0.9352905147977071 0.879261090018043 0.8933024184514337 1.0372366607237902 0.8648795939514519 1.0 12.133261074716996 -2.9421337974937374 1.2926503973982086 0.9955163925104332 199.99999784713003 0.7627521483879812 0.07164207220145304 226.52203040101162 1.0563476377208316 0.009539836151090617 132933.562445973 0.0011425262909331023 2.9421337974937374 199.0044814546196 ASS(ph)LGEIDESSELR ddPTM_A549_PD325901_60min_R1 2 ASSLGEIDESSELR 14 0 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AS(0.001)S(0.999)LGEIDESSELR;AS(0.002)S(0.998)LGEIDESSELR 365.69 1.571999999999999e-229 189282000.0 2744.46 2718.77 2938.4 2650.6499999999996 3409.4100000000003 3399.2 2572.7599999999998 3323.84 4272.200000000001 5199.2 5601.9 True False 3023.0755588353304 2947.890289424144 3137.817494034621 2814.374630437076 3169.944803425974 3371.518042201167 2670.6677896682927 3257.5434036979627 4092.654290975695 4870.921624698975 4912.901813369913 0.6153340070034309 0.6000303693026778 0.6386892336206276 0.5728538320831225 0.6452286090471672 0.686257973449817 0.5436029237141212 0.663058926769699 0.8330421503311941 0.9914551134409622 1.0 12.262359691107052 -9.087875099057928 0.8948338766411568 0.9634799092358497 0.6093763946841905 0.905274821827785 0.04713694603299292 0.10336928833938702 0.17371364211337256 0.013368419948019569 0.011707515769832755 8.168172501776934e-10 9.087875099057928 -0.3541035145516592 ASS(ph)LIEEAKK ddPTM_A549_PD325901_60min_R1 2 ASSLIEEAKK 10 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 AS(0.078)S(0.922)LIEEAKK;AS(0.14)S(0.86)LIEEAKK 51.773999999999994 0.010249 6638100.0 2886.7 2644.6000000000004 2582.4 2700.2 2634.4 2057.44 2396.6000000000004 2528.0 2794.0 2513.7 2806.1 True False 3179.755658923778 2867.4697232245067 2757.6571932327115 2866.985221400862 2449.3688321866234 2040.6848907820574 2487.8039244698425 2477.577056822364 2676.577896396727 2354.984553009273 2460.9674893334977 1.2920754429734256 1.1651798472157393 1.1205581565726275 1.1649829726833676 0.9952869523075188 0.8292205807784705 1.0109048312310753 1.0067492023201674 1.0876120501379003 0.9569344427410831 1.0 11.265009883828682 -5.828892889894848 1.0190639243644977 1.021838856487533 1.2929569988382923 0.6009909761256558 0.0755138412672414 0.564981293453266 0.7763886459762203 0.012360334871763726 0.1336073000322534 1.4828837638679848e-06 5.828892889894848 0.2711181423507594 ASS(ph)LNENVDHSALLK ddPTM_A549_PD325901_60min_R1 1 ASSLNENVDHSALLK 15 0 Q96SB3 Q96SB3 PPP1R9B Neurabin-2 1 AS(0.14)S(0.86)LNENVDHSALLK 206.64 6.2366e-40 25648000.0 5731.2 6012.8 5789.7 5914.9 7001.0 5847.0 6121.8 6050.4 6374.5 6899.7 6985.1 True False 6313.027204913551 6519.519757923435 6182.623858294393 6280.2499392874415 6509.273912138834 5799.383970566675 6354.768448977498 5929.720025553022 6106.601932920873 6464.05176448983 6125.976982197143 1.0305339414855785 1.064241634741687 1.0092469946037788 1.025183404628949 1.0625691103730228 0.9466871957600251 1.03734775162317 0.9679631580049243 0.9968372311334868 1.0551870800812955 1.0 12.580724230813384 -7.2383395075061046 24.951468039658057 0.9959244835208182 1.0374442920694453 0.2570091510475989 0.031325357586095344 574.6469726099539 620709.3182088836 0.0033743425924856233 0.005842296303789455 5.7764430035442014e-08 7.2383395075061046 0.041519808548627135 ASS(ph)LNFLNK ddPTM_A549_MK2206_60min_R1 2 ASSLNFLNK 9 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 AS(0.001)S(0.999)LNFLNK;AS(0.003)S(0.997)LNFLNK 161.67 6.9721000000000006e-06 503510000.0 12214.900000000001 13997.2 13092.4 11522.9 17520.1 13212.0 13131.2 12679.3 18474.0 18459.9 18917.2 True False 14276.47649436722 14709.59769312495 14949.099188943372 14346.01101728264 14942.916498736126 14610.085070584191 15516.969066994074 14476.629603727715 14289.668496915932 14289.795769042648 14219.537151840424 1.004004303509937 1.0344638883847985 1.0513070171913803 1.008894372868237 1.0508722146980765 1.027465585874799 1.0912429076487713 1.0180802264618025 1.0049320413404899 1.0049409918517025 1.0 13.795586885321683 -8.517175319575044 23.336165955013588 1.0028120173300061 1.0388241799157385 0.33330703991429744 0.021995621062470626 82.50927606966992 337596.5660843481 0.003488251392332728 0.004019471730754827 3.0396577038965566e-09 8.517175319575044 0.036012162585732366 ASS(ph)LNFLNK ddPTM_A549_PD325901_60min_R1 4 ASSLNFLNK 9 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 AS(0.002)S(0.998)LNFLNK;ASS(1)LNFLNK;AS(0.03)S(0.97)LNFLNK;AS(0.002)S(0.998)LNFLNK 182.92 5.2377e-11 905483000.0 27876.4 26686.0 27872.6 26391.4 32956.9 29943.5 29860.6 31483.2 30933.2 31281.1 33218.3 True False 30706.39160647897 28934.92287452515 29764.202247559664 28021.53683878185 30642.12103913275 29699.65006373577 30996.961473347288 30855.24287790739 29633.18517710066 29306.00600753408 29132.65968815326 1.0540195071501028 0.99321253823905 1.0216781634827259 0.9618598898533371 1.0518133725906704 1.0194623622302867 1.0639935318350677 1.0591289366708463 1.0171809060451469 1.0059502400823126 1.0 14.830349798973037 -5.236041782632068 22.868996936888717 1.0156349845550545 1.0540196608586478 0.09191610233524905 0.029116508644633502 3847.53479750076 3464297.557140859 0.004010037158496363 0.32080979882925 5.8070854598773785e-06 5.236041782632068 0.038384676303593324 ASS(ph)LNVLNVGGK ddPTM_A549_MK2206_60min_R1 4 ASSLNVLNVGGK 12 0 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 AS(0.032)S(0.968)LNVLNVGGK;AS(0.112)S(0.888)LNVLNVGGK;AS(0.002)S(0.998)LNVLNVGGK;AS(0.001)S(0.999)LNVLNVGGK 225.97 3.4557000000000002e-40 412225000.0 16331.8 18508.0 17038.699999999997 16562.8 22285.5 16798.6 17019.300000000003 17326.2 24806.2 25076.699999999997 26028.5 True False 19088.20856582589 19449.97814594038 19455.043869011748 20620.686743532344 19007.332471423346 18576.216701991798 20111.486508612492 19782.24190926214 19187.63530736148 19411.856053475465 19564.905099944946 0.9756351215769303 0.9941258619238132 0.9943847807913208 1.0539630342285875 0.971501388548868 0.9494662308402441 1.0279368290250017 1.0111085031185663 0.9807170139258929 0.9921773683190566 1.0 14.255980491977226 -8.78118956044389 24.968743344820865 0.9908941489477142 0.9975247853445538 0.010681536277072134 0.026917778913551575 1253.2386877330277 1584375.518233829 0.004749342233006242 0.005058378293967567 1.655047412265713e-09 8.78118956044389 0.006630636396839584 ASS(ph)LNVLNVGGK ddPTM_A549_PD325901_60min_R1 2 ASSLNVLNVGGK 12 0 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 AS(0.065)S(0.935)LNVLNVGGK;ASS(1)LNVLNVGGK 238.03 1.6845e-50 764400000.0 28251.5 25148.6 27832.5 25606.2 30025.9 28538.6 29487.7 29707.7 30303.0 28088.2 31114.1 True False 31119.57148234492 27267.960781019377 29721.38082041878 27187.83681810042 27916.984367731657 28306.191103542675 30609.87055978858 29115.156618260182 29029.470291521095 26314.70625843779 27287.262948530457 1.1404431269285968 0.9992926308678343 1.0892034454492407 0.9963563172085974 1.0230774856528846 1.0373407973139017 1.1217640485791947 1.066987065473643 1.0638469071184167 0.9643585840057644 1.0 14.735940071757177 -10.663383946388663 0.9515176527455123 1.000313333475623 1.0572609035931373 0.2833040896876575 0.04516755765336644 0.7191466983842317 1.168639718675663 0.027367941511967794 0.007445482087110533 2.170781209421262e-11 10.663383946388663 0.05694757011751439 ASS(ph)LPGSLQR ddPTM_A549_MK2206_60min_R1 1 ASSLPGSLQR 10 0 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 AS(0.046)S(0.954)LPGSLQR 91.70100000000001 2.9969e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASS(ph)LPGSLQR ddPTM_A549_PD325901_60min_R1 2 ASSLPGSLQR 10 0 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 AS(0.067)S(0.931)LPGS(0.002)LQR;AS(0.075)S(0.922)LPGS(0.003)LQR 145.99 1.0742e-16 14932000.0 1745.8 1849.9 1633.7 1770.3 2086.2 1985.9 1813.6 1925.3 2184.3 1969.0 2478.7 True False 1923.032330809968 2005.7975652246137 1744.5727062361684 1879.6474103569913 1939.672508999291 1969.727488823047 1882.6175404399987 1886.8983811313694 2092.5014671078625 1844.6770039683568 2173.8356137738997 0.8846263804977769 0.9226997444127973 0.8025320291848071 0.8646686062401097 0.8922811351093433 0.9061069182703703 0.8660349147430103 0.86800417160137 0.9625849598972958 0.8485816463214045 1.0 11.086027132037433 -8.862302657668401 3.2658777922488866 0.9845631427945829 0.875559955717279 0.055583598537200296 0.050518381585508365 0.09272783088507625 1.870531774510163 0.005605659934728633 0.005914430533808894 1.37308474556447e-09 8.862302657668401 -0.10900318707730394 ASS(ph)PAES(ph)SPEDSGYMR ddPTM_A549_MK2206_60min_R1 4 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 AS(0.155)S(0.834)PAES(0.543)S(0.448)PEDS(0.012)GY(0.009)MR;AS(0.089)S(0.911)PAES(0.642)S(0.358)PEDSGYMR;AS(0.115)S(0.885)PAES(0.554)S(0.436)PEDS(0.01)GYMR;AS(0.103)S(0.897)PAES(0.601)S(0.398)PEDS(0.001)GYMR 106.42 3.6356999999999998e-06 15008200.0 1659.48 1741.28 1628.2800000000002 1550.0299999999997 2756.7 2061.73 2002.98 1670.02 2402.42 2609.63 3050.3199999999997 True False 1939.5596536093226 1829.9037143917792 1859.1945882628631 1929.787419583491 2351.193081778409 2279.9009001343884 2366.895539006931 1906.7504492217536 1858.2757058764091 2020.1127705332524 2292.841359450758 0.8459196906993763 0.7980943412631593 0.8108692651585048 0.8416576278289768 1.0254495244894 0.9943561471171868 1.032297995345789 0.8316102818724924 0.810468503726552 0.8810521330691468 1.0 11.162920823684068 -6.544942565848364 24.801461632379933 0.9252768007835784 0.8179392369563697 0.3653362098568905 0.07197254306130078 239.0214289372601 268677.9820833905 0.013012868744908604 0.027090083497626656 2.8513953311099205e-07 6.544942565848364 -0.10733756382720872 ASS(ph)PAES(ph)SPEDSGYMR ddPTM_A549_PD325901_60min_R1 2 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 AS(0.097)S(0.901)PAES(0.608)S(0.385)PEDS(0.005)GY(0.004)MR;AS(0.013)S(0.987)PAES(0.461)S(0.461)PEDS(0.077)GY(0.001)MR 107.74 3.1425e-06 15273000.0 599.99 924.13 884.66 757.6600000000001 643.6 760.49 867.01 863.1899999999999 609.31 1123.17 837.49 True False 660.9005431107072 1002.0096783345174 944.6983474927392 804.4589374292932 598.3957562994649 754.2968215796554 900.0045399960762 845.9729982905446 583.7028196326017 1052.2528545186087 734.4840392865221 0.8998160719090724 1.3642361504653928 1.2862067750449953 1.0952708219646878 0.814715806324051 1.026975102566394 1.2253561573241818 1.1517922147257589 0.7947113734419753 1.4326422335068945 1.0 9.520587330396484 -7.474481813038477 0.5421938381409209 0.9158681129539884 1.1787537814814066 0.0 0.23090686822060164 1.1132363330467077 0.6384646166157643 0.0457770079850745 0.12101400129209049 3.353653482600747e-08 7.474481813038477 0.26288566852741824 ASS(ph)PAESS(ph)PEDSGYMR ddPTM_A549_PD325901_60min_R1 3 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 AS(0.094)S(0.906)PAES(0.476)S(0.523)PEDS(0.001)GYMR;AS(0.128)S(0.871)PAES(0.249)S(0.706)PEDS(0.046)GYMR;AS(0.012)S(0.988)PAES(0.173)S(0.827)PEDS(0.001)GYMR 140.27 1.4880999999999997e-11 26060100.0 2067.52 1722.4300000000003 2273.2 2151.15 1643.8300000000002 2103.8 2115.16 2015.45 2181.68 2496.9700000000003 2608.79 True False 2277.4131083722214 1867.585220968612 2427.473021862067 2284.0216498838845 1528.3730517056397 2086.6673503126663 2195.6535712599634 1975.2502686600606 2089.9915765965666 2339.310888064435 2287.9253684823534 0.995405330849098 0.8162789078244431 1.0609930967600922 0.9982937736290505 0.6680170047327433 0.9120347101605034 0.9596701017902536 0.8633368447548185 0.9134876536566916 1.0224594387080759 1.0 11.159824277216993 -10.407288029759826 0.79186810094514 0.9994450679856245 0.907297176253787 0.12669146732825198 0.10041313052647362 1.1837473225502304 1.360547241025443 0.062430946282113056 0.019179950287133648 3.914821549250618e-11 10.407288029759826 -0.09214789173183746 ASS(ph)PAESSPEDSGYMR ddPTM_A549_MK2206_60min_R1 3 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 AS(0.018)S(0.98)PAES(0.002)SPEDSGYMR;AS(0.084)S(0.916)PAESSPEDSGYMR;AS(0.001)S(0.965)PAES(0.025)S(0.009)PEDSGYMR 146.96 6.5092e-15 59524000.0 3389.92 3672.3 3801.4300000000003 2643.16 3141.09 2714.01 2674.12 2375.1800000000003 3620.9 3943.9 3310.52 True False 3962.0556204132113 3859.2043843384936 4340.529935674512 3290.7343186559597 2679.039821976761 3001.2047367859677 3159.9729896300555 2711.869038683684 2800.7719313891353 3052.970250842492 2488.426518296088 1.5921931354140078 1.5508612996862872 1.7442869635735208 1.3224157090679292 1.0765999326398403 1.206065244329978 1.2698679130753672 1.0897926937945488 1.1255192431026337 1.2268677529336758 1.0 11.28101807040917 -6.5094344248393865 3.303152597345019 1.0918166482890346 1.6194723076715325 0.8305323649433167 0.09411899076862848 0.06597044532456786 1.4872393395201606 0.01419263488949364 0.033592172886090094 3.0943224993214074e-07 6.5094344248393865 0.5276556593824979 ASS(ph)PAESSPEDSGYMR ddPTM_A549_PD325901_60min_R1 3 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 AS(0.013)S(0.987)PAESSPEDSGYMR;AS(0.017)S(0.982)PAESSPEDSGYMR;AS(0.012)S(0.955)PAES(0.031)S(0.002)PEDSGYMR 175.15 3.1882e-28 70499000.0 3411.75 2812.99 2764.63 2828.8999999999996 3289.6400000000003 3316.58 2807.39 2930.08 2901.81 3445.7 3541.83 True False 3758.108348402398 3050.0505394892652 2952.254416870723 3003.6347281019553 3058.5870350419086 3289.5708720885946 2914.226762712755 2871.6372557967084 2779.8570170160992 3228.13791395316 3106.207363510232 1.20987040097525 0.9819210962279397 0.9504370028710732 0.9669781751813368 0.9846693015322361 1.059031316045542 0.938194531681064 0.9244834358230215 0.8949360720961868 1.0392538347166682 1.0 11.600938428721475 -5.259624639916512 3.7969519520489423 0.9576814266477592 1.2359742731280872 0.6597782102162377 0.04768294135989047 0.11456659834360233 3.1615737974301106 0.006863521496593766 0.08895040201092229 5.500160465445305e-06 5.259624639916512 0.2782928464803279 ASS(ph)PCHS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ASSPCHSPR 9 0 A0A494BYR6;Q86Y91-6;Q86Y91 A0A494BYR6 KIF18B Kinesin-like protein KIF18B 2 AS(0.171)S(0.877)PCHS(0.952)PR 47.559 0.039347 1591900.0 701.13 606.91 576.03 697.94 462.73 606.29 496.8 537.67 512.23 854.47 781.01 True False 772.3082014553742 658.05643565083 615.1228597497828 741.0501686632534 430.2294411318383 601.3525752548092 515.705995859391 526.9457500560445 490.70275442780763 800.5186183752373 684.9507212303033 1.127538343295938 0.9607354445423958 0.8980541821240859 1.0819028956304837 0.6281173634784463 0.8779501307403023 0.7529096325836168 0.7693192133728227 0.7164059241319011 1.1687243966067395 1.0 9.419856386907687 -5.131843459913434 0.8127854018348394 0.8413560468693663 1.3204071354943578 0.1817122182648444 0.15355994098045142 2.979262578063718 1.2305063376043857 0.02158828144407932 1.3456206507652628 7.381702533397865e-06 5.131843459913434 0.4790510886249916 ASS(ph)PEKAEEDR ddPTM_A549_MK2206_60min_R1 4 ASSPEKAEEDR 11 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.449)S(0.551)PEKAEEDR;AS(0.135)S(0.865)PEKAEEDR;AS(0.048)S(0.952)PEKAEEDR;AS(0.01)S(0.99)PEKAEEDR 86.539 9.242899999999999e-05 118566900.0 13363.7 13927.2 13218.0 11193.0 3590.35 1904.46 2339.86 2167.85 3191.9300000000003 18806.5 18787.9 True False 15619.165848903825 14636.034992119126 15092.511157576408 13935.285502472865 3062.2142711078845 2105.9886931217666 2764.982274361579 2475.149376262188 2468.96295146481 14558.098588318502 14122.345910338883 1.1059894686101075 1.036374203339983 1.0686971735005635 0.9867542964140914 0.21683467396631717 0.14912456517440104 0.19578774602435933 0.17526474652133725 0.17482668723312444 1.0308555448752044 1.0 13.785692138986937 -6.664307235422221 6.7973049558664425 0.4788980667695027 1.0587089840955723 0.490864594297987 0.3049709050824723 0.19644255895095164 11.834848055642714 0.05410588089903541 0.11308846245975765 2.1661711358442973e-07 6.664307235422221 0.5798109173260697 ASS(ph)PEKAEEDR ddPTM_A549_PD325901_60min_R1 5 ASSPEKAEEDR 11 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.053)S(0.947)PEKAEEDR;AS(0.001)S(0.999)PEKAEEDR;AS(0.158)S(0.842)PEKAEEDR;AS(0.4)S(0.6)PEKAEEDR;AS(0.152)S(0.848)PEKAEEDR 182.02 4.374800000000001e-19 243268100.0 20515.000000000004 21346.300000000003 21051.760000000002 20568.699999999997 24745.519999999997 22430.2 22062.2 23539.1 23960.5 25080.0 25738.300000000003 True False 22597.667697655208 23145.22761584637 22480.45902811675 21839.181884093 23007.48004260959 22247.53588790911 22901.789093899064 23069.594184433285 22953.523509883224 23496.444519820423 22572.652268526555 1.0011082184242714 1.0253658870259639 0.9959157107763383 0.9675062382697381 1.0192634772781806 0.9855968905758248 1.0145812207381333 1.0220152204532749 1.01687312757162 1.040925286063168 1.0 14.46228832354846 ASS(ph)PEKAEEDRR ddPTM_A549_PD325901_60min_R1 2 ASSPEKAEEDRR 12 2 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.157)S(0.843)PEKAEEDRR;AS(0.108)S(0.892)PEKAEEDRR 64.39399999999999 0.0021268 94889000.0 5617.6 6269.6 6147.1 6555.7 7279.4 7294.0 6478.4 7033.9 7219.2 7332.2 8460.8 True False 6187.894616541456 6797.961195163118 6564.279171515184 6960.630699925054 6768.120056566695 7234.600082317997 6724.939057116506 6893.603346512195 6915.802129444256 6869.243640678919 7420.175237430186 0.8339283667220367 0.9161456404522115 0.8846528500300725 0.9380682365576739 0.9121240186384983 0.9749904619265489 0.906304614369935 0.9290351138525998 0.9320267929197036 0.9257522121617616 1.0 12.857237543096604 -12.280884071210044 0.01367162562225587 1.9936162047618673 5.595154116221307e-07 0.34673436266595226 0.03344306463932964 1246.0072762998352 2.2927026771882715 187.37402422354498 148.78973424538432 5.237402229975919e-13 12.280884071210044 -1.9936156452464557 ASS(ph)PFR ddPTM_A549_MK2206_60min_R1 4 ASSPFR 6 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.005)S(0.995)PFR;AS(0.02)S(0.98)PFR;AS(0.017)S(0.983)PFR;AS(0.015)S(0.985)PFR 116.9 0.019066 2111403000.0 18271.0 18427.2 16309.599999999999 13909.400000000001 20037.9 17089.1 15610.0 18072.1 23039.3 22860.7 21000.5 True False 21354.6981169378 19365.06577106508 18622.546525617214 17317.203624416707 17090.35145404562 18897.457219173506 18446.134940887176 20633.875518485078 17820.935336201972 17696.45199255431 15785.49626568546 1.352804989942488 1.2267631910414432 1.1797251231245063 1.0970325755333314 1.0826616513284195 1.19714052071032 1.1685495742687175 1.3071413892345616 1.128943622440376 1.1210576908514995 1.0 13.946311996474599 -14.999999999362378 0.1295288597202971 0.3282482695370352 1.268656725822337 0.21255699084109014 0.08553728388459364 49.05467476800642 0.4351563901486465 8.413992975737088 0.2459403081199721 1.0000000014681777e-15 14.999999999362378 0.9404084562853017 ASS(ph)PFR ddPTM_A549_PD325901_60min_R1 2 ASSPFR 6 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.002)S(0.998)PFR;AS(0.005)S(0.995)PFR 110.14 0.024115 2810400000.0 19272.4 18858.7 18185.0 18377.699999999997 20497.0 18349.4 19595.8 20511.1 18223.0 21121.0 20387.4 True False 21228.91986040899 20447.9888336134 19419.143455288442 19512.848790215023 19057.361430811252 18199.968570124176 20341.528892233207 20101.990019853318 17457.15068218952 19787.41645546759 17879.879046376736 1.1873078003126045 1.1436312729283857 1.0860891958451828 1.0913300218420212 1.065855164980723 1.017902219747527 1.137677097225963 1.124279977941287 0.976357314102028 1.1066862591264233 1.0 14.126049356575004 -2.000000000000001 0.15517919756808551 0.9618762251536207 1.7700725325243796 0.12226663548814232 0.05832358957188949 31.83526821817126 0.304856252272747 0.08246847299152854 5.891069342777484 0.00999999999999998 2.000000000000001 0.8081963073707589 ASS(ph)PFRR ddPTM_A549_MK2206_60min_R1 3 ASSPFRR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.071)S(0.929)PFRR;AS(0.011)S(0.989)PFRR;AS(0.016)S(0.984)PFRR 89.355 0.0052981 7835147000.0 3526.19 4377.7 3563.81 3515.0099999999998 5486.200000000001 4417.61 3918.63 3768.0599999999995 5944.4 6018.6 6457.5 True False 4121.324664931583 4600.506231331485 4069.2118466093484 4376.187607794795 4679.187247525196 4885.078558027808 4630.59434743169 4302.194044199783 4598.002891256203 4658.994079900765 4853.924532066563 0.8490706103287776 0.9477910505074982 0.8383343868918534 0.9015771833460355 0.9640008237896989 1.006418316921788 0.9539897698945496 0.8863331137058531 0.9472753152382859 0.9598406504101937 1.0 12.244935962566109 -2.0000000000001243 0.1023441984712449 1.0294502276307635 0.5813972057563372 0.34376932710767194 0.04341059224264906 81.18089558121844 0.5681524589512457 0.26660923567710815 5.136144123619697 0.009999999999997136 2.0000000000001243 -0.4480530218744263 ASS(ph)PFRR ddPTM_A549_PD325901_60min_R1 8 ASSPFRR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 ASS(1)PFRR;ASS(1)PFRR;AS(0.003)S(0.997)PFRR;AS(0.001)S(0.999)PFRR;AS(0.096)S(0.904)PFRR;AS(0.02)S(0.98)PFRR;AS(0.089)S(0.911)PFRR;AS(0.044)S(0.956)PFRR 104.44 0.0042222 13624045000.0 28231.31 27203.69 26303.34 28283.930000000004 29003.820000000003 28585.73 28568.26 30234.490000000005 30747.39 28484.339999999997 32651.36 True False 31097.33180840804 29496.240427658362 28088.44282723272 30030.964118634372 26966.691740947088 28352.93729244856 29655.440767451717 29631.439378451454 29455.18412522896 26685.833911232126 28635.449714024497 1.085973229649605 1.0300603176213532 0.9808975625577875 1.0487338043769716 0.9417240521890557 0.9901341720001844 1.035619871998297 1.0347817015054301 1.0286265597150022 0.9319160054316337 1.0 14.805514640428147 -5.321114238556892 3.4776614522536504 1.0109109787316384 1.0908436905896222 0.27734134743229377 0.03748851038824151 0.20711496539500773 4.19627208551846 0.0039029271711923702 0.03902547869036911 4.7740367896750555e-06 5.321114238556892 0.07993271185798378 ASS(ph)PIKQSHEPVPDTSVEK ddPTM_A549_MK2206_60min_R1 1 ASSPIKQSHEPVPDTSVEK 19 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 AS(0.127)S(0.873)PIKQSHEPVPDTSVEK 196.18 5.5556000000000006e-55 11192000.0 4014.1 4664.0 4029.7 4310.1 5771.7 4482.4 4465.5 4929.5 6544.6 6464.0 6998.4 True False 4691.58194467736 4901.3776784453175 4601.172054144776 5366.07469348774 4922.690575724758 4956.724592823689 5276.823547631752 5628.271720960606 5062.258549578654 5003.777910557032 5260.504133986004 0.8918502533563151 0.9317315515027326 0.8746637084492438 1.020068525147559 0.93578304480767 0.9422527701860898 1.0031022527936657 1.06991109171431 0.9623143373034223 0.9511974105731869 1.0 12.360985349721476 -6.2453822618932655 0.8257464213435222 0.9885246276300178 0.8890595676915862 0.3921369031521983 0.04257971335341743 0.7075157164865028 0.7196781977422012 0.006730850604807073 0.04711087570812855 5.683524521677469e-07 6.2453822618932655 -0.09946505993843158 ASS(ph)PIKQSHEPVPDTSVEK ddPTM_A549_PD325901_60min_R1 3 ASSPIKQSHEPVPDTSVEK 19 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 AS(0.015)S(0.985)PIKQSHEPVPDTSVEK;AS(0.288)S(0.709)PIKQS(0.003)HEPVPDTSVEK;AS(0.018)S(0.962)PIKQS(0.02)HEPVPDTSVEK 235.25 1.8997999999999995e-85 130417000.0 12578.7 12663.0 12554.5 15954.7 16133.099999999999 16927.899999999998 15068.199999999999 16113.600000000002 15767.399999999998 16939.600000000002 17192.5 True False 13855.680364050477 13730.155450802371 13406.52386634142 16940.185583247283 14999.966712173551 16790.044794827354 15641.628596635424 15792.201607125338 15104.751010610504 15870.030765069774 15077.931492236967 0.9189377449542214 0.9106126697731375 0.8891487451872235 1.1235085921413768 0.9948292124749634 1.1135509405565271 1.0373855727285062 1.047371890186404 1.0017787266368299 1.0525336829684249 1.0 13.880150901618755 -6.228118850505889 24.984935352610417 1.0209838166148069 0.9066709843173744 0.6209597148067652 0.04573342885835247 367.7541600118993 275755.0857221327 0.006420278475559823 0.01698514841995955 5.913997675549848e-07 6.228118850505889 -0.1143128322974325 ASS(ph)PPDR ddPTM_A549_MK2206_60min_R1 2 ASSPPDR 7 0 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 ASS(1)PPDR;ASS(1)PPDR 149.19 0.0033262 171318000.0 12873.8 9885.2 6750.9 5429.799999999999 4328.4 4072.8999999999996 3418.1 4420.5 4686.1 15465.6 15395.199999999999 True False 15046.582705808867 10388.314456897 7708.279132522517 6760.101243752986 3691.69809379681 4503.891574627786 4039.124525396954 5047.119412213484 3624.7058321639993 11971.910218674318 11572.146954095413 1.300241240065124 0.8976998389413425 0.6661062258455452 0.5841700136170989 0.3190158324502013 0.38920103525248156 0.3490384750054956 0.4361437365282762 0.31322673714242855 1.0345452979611038 1.0 13.498368928755605 -5.3877164347536315 1.648849280207298 0.578727778779116 1.4524232951405625 0.46514661161911386 0.24000427166948776 0.6477575491993037 2.0248482525597904 0.041348344622238194 0.8272996324844528 4.095279668223621e-06 5.3877164347536315 0.8736955163614465 ASS(ph)PPDR ddPTM_A549_PD325901_60min_R1 2 ASSPPDR 7 0 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.001)S(0.999)PPDR;AS(0.001)S(0.999)PPDR 154.12 0.0021337 419150000.0 16533.7 15517.8 13149.0 11331.9 13327.7 10155.2 8114.4 9011.1 12225.5 14150.4 17912.2 True False 18212.189052533373 16825.53946572383 14041.370211360329 12031.845726387826 12391.608330068946 10072.499418145824 8423.19793237006 8831.366541428803 11711.704750321469 13256.941329077621 15709.112954791153 1.1593391113136533 1.0710687175110147 0.8938359697183171 0.765915030403942 0.7888165528970625 0.6411882992459986 0.5361981899685209 0.562181108942584 0.7455357144624447 0.8439013308535896 1.0 13.939314097937476 -5.771378477518918 2.2292690956526275 0.8005707494603288 1.1522675507734972 0.5085723452861622 0.13451639984537317 0.29635243775428405 2.78715429938882 0.025231464238088943 0.13617421925807635 1.6928618677578905e-06 5.771378477518918 0.3516968013131684 ASS(ph)PPDRIDIFGR ddPTM_A549_MK2206_60min_R1 4 ASSPPDRIDIFGR 13 1 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.005)S(0.995)PPDRIDIFGR;ASS(1)PPDRIDIFGR;AS(0.019)S(0.981)PPDRIDIFGR;AS(0.058)S(0.942)PPDRIDIFGR 188.44 5.944e-26 1107510000.0 14176.0 16224.499999999998 13934.8 12608.900000000001 21130.8 14396.7 11836.0 14740.599999999999 22363.7 22354.800000000003 23478.2 True False 16568.562230075542 17050.25774955747 15910.96417601723 15698.081066035036 18022.487311801506 15920.149238243976 13986.447992334435 16830.125191194216 17298.35765749046 17304.83515391712 17647.914974644238 0.938839645016453 0.966134400242439 0.9015775630649523 0.8895147720617059 1.0212247360492974 0.9020980246741532 0.7925269366058008 0.9536608270934562 0.9801927129830346 0.9805597533068331 1.0 14.107210124891326 -8.614934611364742 4.38238963590038 0.9904689445792718 0.9171317527802352 0.2530033566626989 0.053100860279941965 0.2112602153047846 7.423382891771188 0.009157465855353736 0.010407869764698614 2.4269754800337456e-09 8.614934611364742 -0.07333719179903664 ASS(ph)PPDRIDIFGR ddPTM_A549_PD325901_60min_R1 7 ASSPPDRIDIFGR 13 1 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.219)S(0.781)PPDRIDIFGR;AS(0.089)S(0.911)PPDRIDIFGR;AS(0.026)S(0.974)PPDRIDIFGR;AS(0.012)S(0.988)PPDRIDIFGR;AS(0.174)S(0.826)PPDRIDIFGR;ASS(1)PPDRIDIFGR;AS(0.06)S(0.94)PPDRIDIFGR 226.67 9.920299999999997e-47 1609304400.0 21323.760000000002 19911.2 19398.3 21463.06 23633.0 25641.6 22279.32 24014.2 23565.300000000003 22041.7 26384.0 True False 23488.53241747757 21589.18670236247 20714.785289454045 22788.78447005407 21973.099609423934 25432.783311045376 23127.171714311688 23535.21794222455 22574.932391538212 20649.983300339958 23138.9352619561 1.0151086102953173 0.9330242060817011 0.8952350250753446 0.9848674630903294 0.9496158470848495 1.0991336906007385 0.9994916124051847 1.0171262279695297 0.975625374978027 0.8924344645318079 1.0 14.498034859913743 ASS(ph)PPPQPQPPPPPAR ddPTM_A549_MK2206_60min_R1 2 ASSPPPQPQPPPPPAR 16 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 AS(0.022)S(0.978)PPPQPQPPPPPAR;AS(0.002)S(0.998)PPPQPQPPPPPAR 138.21 1.0657e-10 14044200.0 3721.4 4579.3 3918.9 4464.9 5698.6 4729.6 4451.4 4263.8 5871.2 5566.7 6280.6 True False 4349.4813405053 4812.3668102282645 4474.658948057665 5558.80070043698 4860.343488889771 5230.083132745611 5260.161760145107 4868.206707339858 4541.382574379823 4309.178603758942 4720.953684258186 0.9213141308732716 1.0193632753218682 0.947829452972229 1.177474102101988 1.0295257725354041 1.1078446183840132 1.1142159216017915 1.0311913721104025 0.9619629587815839 0.9127771403747743 1.0 12.204862613861396 -8.624335523323923 5.703226734493206 0.9822165279470182 1.0491303681699282 0.19783383610739957 0.07236959836419707 0.2862607586135627 13.805927738233219 0.011714243410813107 0.01328505526385884 2.375004717883142e-09 8.624335523323923 0.06691384022291003 ASS(ph)PPPQPQPPPPPAR ddPTM_A549_PD325901_60min_R1 1 ASSPPPQPQPPPPPAR 16 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 AS(0.033)S(0.967)PPPQPQPPPPPAR 89.46600000000001 1.1432999999999999e-05 12387000.0 4234.3 3670.8 3878.1 3266.5 3385.9 3995.2 3673.2 3072.5 4881.1 3941.2 4584.5 True False 4664.163018873089 3980.151198673723 4141.291186909765 3468.2642862402463 3148.0860647208788 3962.66441580434 3812.985636052163 3011.2165771703776 4675.964341482484 3692.3519593905994 4020.6355635399377 1.1600561516116528 0.9899308544068662 1.030009092210187 0.862615930101021 0.7829821964637776 0.9855815960388716 0.9483539544417323 0.7489404422715634 1.1629913399476492 0.9183503207487168 1.0 11.973207858676199 -8.794091681563929 24.99633951486901 1.0769681144182772 0.9374958896095018 0.05466224242802786 0.12313696654266228 213.68601496499073 163582.27879950427 0.02104604550019019 0.022406005318540586 1.6066020561228443e-09 8.794091681563929 -0.1394722248087754 ASS(ph)PQGFDVDRDAK ddPTM_A549_MK2206_60min_R1 2 ASSPQGFDVDRDAK 14 1 P27216;P27216-2 P27216 ANXA13 Annexin A13 1 AS(0.121)S(0.879)PQGFDVDRDAK;AS(0.081)S(0.919)PQGFDVDRDAK 47.732 0.0086638 36700000.0 7073.4 7540.5 6048.0 5678.6 8667.7 6406.1 6316.200000000001 6368.700000000001 9785.099999999999 9072.0 9839.5 True False 8267.216991973502 7924.279241920432 6905.6973430944245 7069.857254922045 7392.692812032763 7083.989249974975 7463.771781782926 7271.482728325753 7568.790473593806 7022.62889922236 7396.080593615015 1.1177835188965537 1.071416021177677 0.9336968757555273 0.9558924034745382 0.9995419490716236 0.9578031445588268 1.0091523053745992 0.983153527910874 1.0233515411024443 0.9495068111189793 1.0 12.852545230249952 -5.567010373845114 7.084797391082247 0.9974180113397849 1.106749333631717 0.6462905764379681 0.03134644824775673 0.08142433487527054 10.248851091633089 0.0042259795411794185 0.01687642661834438 2.7101268952349466e-06 5.567010373845114 0.10933132229193199 ASS(ph)PQGFDVDRDAK ddPTM_A549_PD325901_60min_R1 2 ASSPQGFDVDRDAK 14 1 P27216;P27216-2 P27216 ANXA13 Annexin A13 1 AS(0.072)S(0.928)PQGFDVDRDAK;AS(0.339)S(0.661)PQGFDVDRDAK 122.97 3.9508e-07 60917000.0 11634.0 11936.400000000001 10836.7 12362.0 14383.9 14103.0 13363.400000000001 14193.5 15925.2 14772.1 15998.400000000001 True False 12815.075115501864 12942.322318799443 11572.143628370877 13125.572663860987 13373.62448576114 13988.149843834744 13871.951499733063 13910.399507914644 15255.919225374773 13839.38708497764 14030.698222213401 0.9133597567662768 0.9224289564085384 0.8247731827094578 0.9354896282410651 0.9531688497574566 0.9969674796147141 0.988685757475062 0.9914260350843909 1.0873243072979506 0.9863648170457492 1.0 13.776299184420317 -7.248615051048548 0.9378166589626348 1.037869595032051 0.8894984319587705 0.6277347958699633 0.03861416272567387 0.2394256320669264 0.4144691918206578 0.0074133481709050845 0.017653152553895404 5.64137473165393e-08 7.248615051048548 -0.14837116307328035 ASS(ph)PSLIER ddPTM_A549_MK2206_60min_R1 1 ASSPSLIER 9 0 A1L170;A1L170-2 A1L170 C1orf226 Uncharacterized protein C1orf226 1 AS(0.111)S(0.877)PS(0.012)LIER 44.097 0.060896000000000006 16873000.0 2215.3 3178.3 2259.3 2216.9 3199.2 2113.2 1819.3 2594.1 4081.2 3287.7 4180.0 True False 2589.188481115009 3340.061894383092 2579.7027128394902 2760.0405995204233 2728.6019179546142 2336.8174213713683 2149.8432605993603 2961.821619098063 3156.814716337193 2545.0062865931836 3141.9906378688697 0.8240598969038265 1.0630400530564816 0.8210408655416094 0.8784369266588543 0.8684309510881782 0.7437378689824393 0.684229683783381 0.9426576843994001 1.0047180530360773 0.8099980489819012 1.0 11.61746316652899 -8.512425099987901 21.737699363350515 1.0007259243349262 0.8446608026498419 0.09634880852068495 0.10561284839577699 69.07322618434877 143633.8817370983 0.01512240553669434 0.017698426694153172 3.07308731542682e-09 8.512425099987901 -0.15606512168508435 ASS(ph)PTKTSPTTPEASATNSPCTSKPATPAPSEK ddPTM_A549_PD325901_60min_R1 2 ASSPTKTSPTTPEASATNSPCTSKPATPAPSEK 33 2 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 AS(0.174)S(0.809)PT(0.008)KT(0.008)SPT(0.001)T(0.001)PEASATNSPCTSKPATPAPSEK;AS(0.25)S(0.749)PT(0.001)KTSPTTPEASATNSPCTSKPATPAPSEK 143.54 2.1503e-40 33795000.0 1804.14 1873.1499999999999 1979.24 2173.6 2291.42 3951.5 2709.88 2914.2 2536.4700000000003 2615.85 2623.2 True False 1987.2949646623292 2031.0069243204962 2113.5631285369864 2307.858335396235 2130.478564169857 3919.320294115649 2813.0059663032357 2856.073994854325 2429.8709867120265 2450.684784576247 2300.563029834869 0.8638298272597096 0.8828303758607643 0.9187155931514271 1.003171095712987 0.9260683304655118 1.7036352594073338 1.2227467493056032 1.2414673963787592 1.0562070915685535 1.0652543541709236 1.0 11.167771267981973 -7.0623679157912616 24.999998622188087 1.112183779273553 0.9210169369762422 0.30082150094852655 0.19262715418831547 323.5935933206449 129710.9375506768 0.03149566217406014 0.05455213017709434 8.662277335863e-08 7.0623679157912616 -0.19116684229731074 ASS(ph)PVEELLTMEDEGNSDMLVVTTK ddPTM_A549_PD325901_60min_R1 1 ASSPVEELLTMEDEGNSDMLVVTTK 25 0 B8ZZD4;Q86VP1-2;Q86VP1 B8ZZD4 TAX1BP1 Tax1-binding protein 1 1 AS(0.19)S(0.81)PVEELLTMEDEGNSDMLVVTTK 88.39399999999999 6.765800000000001e-09 3405000.0 984.93 1117.4 977.25 995.45 956.73 992.49 1118.0 1041.4 715.93 938.74 1094.3 True False 1084.9193685328567 1211.5672195156408 1043.5720616816402 1056.93668566902 889.5325853393207 984.4074904990104 1160.5461017930747 1020.6284600375046 685.8419518136392 879.4677961936294 959.708037339242 1.130468148980766 1.2624331279694916 1.0873849348755154 1.1013106533934438 0.9268783325036223 1.0257364242027678 1.2092699619466036 1.0634780790907643 0.7146360404723845 0.9163909876507068 1.0 9.906451765246969 -8.616887238243859 7.689464607949546 0.8655521464434577 1.1037260466134184 0.4829728977552745 0.10365906678281006 0.17050883883989099 12.244169844516152 0.022114310217878172 0.025074197416676602 2.4160880746696223e-09 8.616887238243859 0.23817390016996076 ASS(ph)RPRPDDLEI ddPTM_A549_MK2206_60min_R1 4 ASSRPRPDDLEI 12 2 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 AS(0.441)S(0.559)RPRPDDLEI;AS(0.204)S(0.796)RPRPDDLEI;AS(0.316)S(0.684)RPRPDDLEI;AS(0.209)S(0.791)RPRPDDLEI 68.972 0.0016283 51056700.0 4476.03 5434.99 4049.8 3523.1699999999996 6349.3 5620.66 4806.030000000001 5041.16 7341.4400000000005 6766.25 6505.300000000001 True False 5231.474435573157 5711.607776280771 4624.122536386214 4386.346808161111 5415.326380866848 6215.434510507855 5679.223440740034 5755.7598679050125 5678.615561870659 5237.749425635284 4889.8544728536735 1.069863012205375 1.1680527115866353 0.9456564734303062 0.8970301330054266 1.1074616659719352 1.271087829916661 1.1614299509870059 1.1770820378926337 1.161305636680159 1.0711462794471636 1.0 12.255575814376105 ASS(ph)RPRPDDLEI ddPTM_A549_PD325901_60min_R1 1 ASSRPRPDDLEI 12 2 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 AS(0.448)S(0.552)RPRPDDLEI 68.044 0.0014492 23378000.0 671.63 943.79 563.37 725.55 873.31 753.17 656.3 1000.6 1002.1 694.56 752.37 True False 739.813383172126 1023.3264955312935 601.6036760190186 770.3655756563943 811.9717183559442 747.0364332327177 681.2758556411401 980.6422480444849 959.985221896621 650.7053630656487 659.8332596663853 1.121212628090586 1.55088650130897 0.9117510631749485 1.1675155266436472 1.2305710669487633 1.132159408894336 1.0324969917181748 1.4861970561173319 1.4548906224914973 0.9861663587474332 1.0 9.36595769023956 ASS(ph)RS(ph)PVFTPR ddPTM_A549_MK2206_60min_R1 1 ASSRSPVFTPR 11 1 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 2 AS(0.141)S(0.862)RS(0.983)PVFT(0.014)PR 59.11600000000001 0.031836 5646200.0 2388.4 2535.8 1989.0 2199.5 2773.1 2015.7 2457.1 2451.0 3047.0 2881.6 3832.1 True False 2791.5035292263306 2664.8613887224783 2271.070108368852 2738.3775987393074 2365.1806635033563 2229.00003608663 2903.5232647824396 2798.436755872693 2356.859365059155 2230.6445586418827 2880.4838094204047 0.9691092586936018 0.9251436789914425 0.788433561383504 0.9506658533485418 0.8211053489584672 0.7738283509169029 1.0079984672320275 0.971516224712188 0.8182164945177698 0.7743992697847244 1.0 11.492095433423671 -11.050205248142902 1.3356715556349852 1.0003680977710672 0.8830195235066322 0.0 0.10204762266096591 0.5392998934322378 1.706725818853152 0.057151960528403246 0.012563875708000756 8.908298312847553e-12 11.050205248142902 -0.11734857426443501 ASS(ph)SDMGSTAK ddPTM_A549_MK2206_60min_R1 1 ASSSDMGSTAK 11 0 Q13472-3;K7EJ41;Q13472-2;Q13472 Q13472-3 TOP3A DNA topoisomerase 3-alpha 1 AS(0.156)S(0.709)S(0.131)DMGS(0.003)T(0.001)AK 42.095 0.029051 3594400.0 1221.8 1024.5 909.47 1092.1 1352.1 1010.1 1026.5 1041.0 1767.4 1618.9 1629.7 True False 1428.0099698579497 1076.6426740066947 1038.446521597898 1359.6645490262317 1153.207881116039 1116.9881115498856 1213.0017627687816 1188.5649379287938 1367.0867219578452 1253.1893656251202 1225.0005125681566 1.1657219366089842 0.8788916110325239 0.8477110915005605 1.1099297796829148 0.9413937947653527 0.9118266483074133 0.9902051063030005 0.9702566862090716 1.115988693826594 1.023011298989473 1.0 10.258566637546572 -8.72837103922445 23.955836090960318 1.054772433738541 0.9709255342561233 0.09654718921703975 0.09215255926476666 170.87380784137713 123786.47230008486 0.015516329990020308 0.017593051632452728 1.8690846067487583e-09 8.72837103922445 -0.08384689948241764 ASS(ph)SDMGSTAK ddPTM_A549_PD325901_60min_R1 1 ASSSDMGSTAK 11 0 Q13472-3;K7EJ41;Q13472-2;Q13472 Q13472-3 TOP3A DNA topoisomerase 3-alpha 1 AS(0.226)S(0.735)S(0.039)DMGSTAK 60.161 0.0030033 6434700.0 1432.6 1586.8 1236.4 1455.3 1690.7 1309.5 1245.1 1475.4 1659.7 1384.3 1921.4 True False 1578.0364973756202 1720.5252048750833 1320.3095390771864 1545.1905757738969 1571.9510645983607 1298.835866163342 1292.4829618448632 1445.9719895710907 1589.9485807622202 1296.8950617538846 1685.0799807581284 0.9364757254226304 1.0210347428737525 0.7835293007772667 0.9169835220988772 0.9328643640351895 0.7707858861268931 0.7670157954540334 0.8581028829981937 0.9435448755654269 0.7696341280907053 1.0 10.718601353876156 -9.010775960390555 2.4052838765152957 0.9786949715467896 0.872152142776937 0.0 0.0982805390017563 0.2747863285484354 3.2088883747130548 0.015182376564486223 0.015180363121295011 9.754927356355884e-10 9.010775960390555 -0.10654282876985266 ASS(ph)TPSSETQEEFVDDFR ddPTM_A549_MK2206_60min_R1 2 ASSTPSSETQEEFVDDFR 18 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H367;F5H270 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 AS(0.081)S(0.703)T(0.105)PS(0.105)S(0.005)ET(0.001)QEEFVDDFR;AS(0.002)S(0.691)T(0.112)PS(0.042)S(0.042)ET(0.11)QEEFVDDFR 136.01 7.3655e-13 10013400.0 2607.5299999999997 2487.8 2797.5 1860.17 2968.3 2874.2 2518.8 2680.0 3775.2 3825.3999999999996 4003.4 True False 3047.6173160121975 2614.4183937470534 3194.2275656922398 2315.9117335062056 2531.6670020832316 3178.345936260452 2976.433356124703 3059.898207155783 2920.1232277556023 2961.2394831443157 3009.245291780918 1.0127513780069988 0.8687953756670332 1.0614713178804531 0.7695988558432248 0.8412963240311168 1.0561937057578508 0.989096290772363 1.0168324315446176 0.9703839151069763 0.9840472264697998 1.0 11.555185994129149 -7.2632577362043795 24.999709068786636 0.9929001342374595 0.9089780736527455 0.25727739212641243 0.07679618356988202 186.51755728074184 2564339.126091486 0.010855648358615307 0.017898658092767892 5.454340719682897e-08 7.2632577362043795 -0.08392206058471396 ASS(ph)VTTFTGEPNTCPR ddPTM_A549_MK2206_60min_R1 1 ASSVTTFTGEPNTCPR 16 0 H0YFA4;P52943;P52943-2 H0YFA4 CRIP2 Cysteine-rich protein 2 1 AS(0.002)S(0.811)VT(0.185)T(0.002)FTGEPNTCPR 200.97 2.0726999999999998e-39 8332400.0 1638.7 2668.1 1830.1 1368.0 2902.7 2204.2 2129.5 2059.9 2472.7 3137.3 2744.3 True False 1915.272497631546 2803.894893623486 2089.635699007458 1703.1600614118531 2475.7166751834393 2437.446980970457 2516.4025853055227 2351.8971331791768 1912.6373980905066 2428.581751050522 2062.814571173095 0.928475358084346 1.3592568778632141 1.0130022001052232 0.8256486478294018 1.200164430569992 1.181612256880808 1.2198879242328011 1.1401398681422366 0.9271979288971259 1.1773146190592498 1.0 11.01039842616163 -8.758668000264375 24.97012830057105 0.965621240835742 1.113471175619191 0.0 0.15351544627976604 87.30145769219594 786585.4773199034 0.023551708884519837 0.026126564985967774 1.7431389200488415e-09 8.758668000264375 0.1478499347834491 ASS(ph)VTTFTGEPNTCPR ddPTM_A549_PD325901_60min_R1 1 ASSVTTFTGEPNTCPR 16 0 H0YFA4;P52943;P52943-2 H0YFA4 CRIP2 Cysteine-rich protein 2 1 ASS(0.987)VT(0.013)TFTGEPNTCPR 244.67 1.0725999999999997e-65 13218000.0 4249.5 4347.2 4931.1 3991.8 5299.1 4377.1 4400.6 4596.3 3504.1 4473.9 5090.5 True False 4680.90611168344 4713.553800499727 5265.754099113165 4238.364419964432 4926.90949690257 4341.454348822882 4568.067241100718 4504.623190772404 3356.8348628359954 4191.41719047945 4464.4007713382125 1.048495946361986 1.0558088401832326 1.1794985192457856 0.9493691621897051 1.1035992844848739 0.972460711120593 1.0232206907650523 1.0090095897510865 0.7519116304224134 0.9388532538092599 1.0 12.124250829048982 -8.546946823597667 22.114448850954265 0.8827214024644018 1.0460831037306904 0.40009523389911417 0.08006870893967771 50.11054549255312 46042.45601084445 0.017121431369029785 0.01941494184185951 2.8382665335784677e-09 8.546946823597667 0.16336170126628857 ASSDLSIASSEEDKLS(ph)QNACILESVSEK ddPTM_A549_PD325901_60min_R1 1 ASSDLSIASSEEDKLSQNACILESVSEK 28 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 ASSDLS(0.005)IAS(0.026)S(0.026)EEDKLS(0.94)QNACILES(0.002)VS(0.001)EK 54.071999999999996 0.0017250999999999998 2862800.0 1264.8 1009.0 1227.9 761.49 1194.4 1364.2 1016.7 1330.9 914.73 1039.5 1320.3 True False 1393.2015649034518 1094.0319710858084 1311.2326779625334 808.5255078307324 1110.5094644563098 1353.0904074990688 1055.3910748595877 1304.354155429148 876.287079159262 973.8657925978204 1157.9114700712787 1.2032021453399102 0.9448321390394915 1.1324118569114932 0.6982619386100055 0.9590624958468967 1.1685611918290915 0.9114609381964408 1.1264714005716296 0.7567824499616707 0.8410537573635669 1.0 10.177309238704614 -8.758570866924225 24.997258190089347 0.8851472731604708 1.0082460835462546 0.1703819995881971 0.1466641290662679 122.17241452031251 1064653.1384175261 0.026207271640980315 0.029086138942457436 1.74352883023338e-09 8.758570866924225 0.12309881038578374 ASSEDAGPS(ph)PQTR ddPTM_A549_MK2206_60min_R1 2 ASSEDAGPSPQTR 13 0 Q5T5P2;Q5T5P2-3;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-10 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 AS(0.001)S(0.001)EDAGPS(0.988)PQT(0.01)R;ASSEDAGPS(0.971)PQT(0.029)R 55.31399999999999 0.018031000000000002 3181800.0 901.4200000000001 1213.14 1090.52 756.3599999999999 1553.58 1136.0700000000002 1063.56 727.03 1704.4299999999998 2008.0300000000002 1825.69 True False 1053.557658396917 1274.883644260109 1245.1721340263457 941.6682339542901 1325.0504400149807 1256.2881733377678 1256.7950850563707 830.0887289359954 1318.3793264154178 1554.414628362598 1372.3207865193335 0.7677196678402672 0.9289982756099192 0.9073477180102478 0.6861866723907003 0.9655544483704526 0.915447893581891 0.9158172763993652 0.6048795129317973 0.9606932572662334 1.13269043479631 1.0 10.422402042430754 -8.97077232730598 24.999674887572766 0.9826589650508702 0.8425243554803626 0.3404668535904235 0.11553367972922152 174.2257092821486 149023.8936796778 0.017815815312852545 0.01871967234325806 1.0696154629366567e-09 8.97077232730598 -0.1401346095705076 ASSEDAGPS(ph)PQTR ddPTM_A549_PD325901_60min_R1 1 ASSEDAGPSPQTR 13 0 Q5T5P2;Q5T5P2-3;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-10 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 ASSEDAGPS(0.881)PQT(0.118)R 55.196000000000005 0.018278 4021900.0 699.83 689.22 663.89 828.17 651.53 412.41 575.49 932.6 734.11 652.08 783.18 True False 770.8762264123835 747.3029882178001 708.9455676948832 879.3241799894647 605.7687804564795 409.05146969409975 597.3905868702113 913.9985613894532 703.2579096362924 610.9075575153312 686.853824987067 1.122329378346111 1.088008774256839 1.0321636742843094 1.280220256480368 0.8819471602533271 0.5955437020414087 0.8697492321331395 1.3307031687661683 1.0238829341156166 0.8894287769698802 1.0 9.423859289684392 -6.776741080000214 24.992971827078552 0.9857638329806993 1.1205956810494744 0.18418623197231987 0.17601487350963285 417.44421252717336 681830.2991736429 0.026385732556391994 0.049991941488417076 1.6720871910657473e-07 6.776741080000214 0.13483184806877513 ASSEDVAS(ph)SPER ddPTM_A549_MK2206_60min_R1 1 ASSEDVASSPER 12 0 M0R2H0;A0A087WWI0;Q9H2I8 M0R2H0 C10orf11 Leucine-rich repeat-containing protein C10orf11 1 ASSEDVAS(0.602)S(0.397)PER 68.069 0.0044005 4858200.0 474.18 343.51 280.74 391.74 322.28 251.17 186.24 289.54 326.84 310.29 156.1 True False 554.2099914120498 360.99319175016086 320.55315345574246 487.7163175858768 274.8730389217346 277.7486426868477 220.07739727039248 330.5831816790616 252.81126185623043 240.19527349423595 117.33606185917 4.723270771412356 3.0765749764418966 2.7319235738496084 4.156576502211634 2.3426134690939673 2.3671208858211834 1.8756160193490683 2.8174047811135567 2.154591332370278 2.047071204609926 1.0 6.874502666651292 -2.0000000000000027 0.0956067009871792 5.597468347567513e-14 11.473311443785661 0.6013328455703948 0.6281986291223998 44.80090301415442 0.2961842532912426 4.196707510251702 67.61920283971207 0.00999999999999994 2.0000000000000027 11.473311443785605 ASSEDVAS(ph)SPER ddPTM_A549_PD325901_60min_R1 2 ASSEDVASSPER 12 0 M0R2H0;A0A087WWI0;Q9H2I8 M0R2H0 C10orf11 Leucine-rich repeat-containing protein C10orf11 1 ASSEDVAS(0.5)S(0.5)PER;AS(0.004)S(0.003)EDVAS(0.496)S(0.496)PER 57.019 0.015125 15142100.0 430.19 441.05999999999995 371.19 432.25 669.15 600.61 214.135 401.82 554.29 445.03 522.5799999999999 True False 473.8625721108603 478.2296741002046 396.3811855467977 458.949100789024 622.1512124421793 595.7188312916112 222.28402460416817 393.8053848783083 530.9951188953979 416.930729850705 458.3059729075579 1.0339436972741358 1.0434724886220617 0.8648833071759887 1.0014032718739971 1.3575018638643612 1.2998277711989803 0.4850122794472149 0.8592630429403991 1.1586039682762366 0.909721353194761 1.0 8.84016727764266 -8.790157708636894 24.94817564618336 1.0748962789726517 0.9962673008160045 0.0 0.22635982458314716 787.063512645569 683733.6173632044 0.04051494659009319 0.04313495913644327 1.6212212641235162e-09 8.790157708636894 -0.07862897815664727 ASSEDVASS(ph)PER ddPTM_A549_MK2206_60min_R1 2 ASSEDVASSPER 12 0 M0R2H0;A0A087WWI0;Q9H2I8 M0R2H0 C10orf11 Leucine-rich repeat-containing protein C10orf11 1 ASSEDVAS(0.02)S(0.98)PER;ASSEDVAS(0.003)S(0.997)PER 186.17 2.6613e-19 13625200.0 3769.9 3170.3 1828.42 1999.85 3561.2 2214.6 2548.5 2348.46 3476.9 3588.2 3649.3 True False 4406.1669547941465 3331.6547285538563 2087.717449745489 2489.8133397766774 3037.352197493115 2448.947502067494 3011.5294616816736 2681.3613968571144 2689.387701468387 2777.6231278868718 2743.0780944437493 1.606285640835043 1.214567946607973 0.7610856774272201 0.9076713290882702 1.1072787915318318 0.8927735258532987 1.097865010763524 0.977500933089858 0.9804269542729699 1.01259352896773 1.0 11.421579980440299 -5.401342564723739 3.3384486276574172 0.9809383005172253 1.6131285430661038 0.7961062396088607 0.09477061049637465 0.07830024538298122 1.4167027817711808 0.011982749272817566 0.10046072286196064 3.968783744909841e-06 5.401342564723739 0.6321902425488785 ASSEDVASS(ph)PER ddPTM_A549_PD325901_60min_R1 2 ASSEDVASSPER 12 0 M0R2H0;A0A087WWI0;Q9H2I8 M0R2H0 C10orf11 Leucine-rich repeat-containing protein C10orf11 1 ASSEDVAS(0.002)S(0.998)PER;ASSEDVAS(0.063)S(0.937)PER 154.67 1.0172000000000001e-13 15495600.0 3858.3 2957.8 3681.6 3399.6000000000004 3850.3 4108.5 3826.6 4277.8 4176.4 3899.5 3807.3 True False 4249.991775669661 3207.064186400002 3931.455515259277 3609.5855709482153 3579.8682108139055 4075.0417381688326 3972.2233569958653 4192.47592313082 4000.880431822219 3653.284904507165 3339.0262364632144 1.272823714069215 0.9604788819500293 1.1774257633337974 1.0810294125665765 1.072129404591261 1.2204281876159275 1.189635263604083 1.2555983769602248 1.1982177283099333 1.0941168609614824 1.0 11.705211714111831 -10.819272419080352 1.1126309855408012 1.0016283871401541 1.1563981140024155 0.16100579254676417 0.09021841829620995 0.479544778432756 1.0711324300355083 0.05594969542793172 0.014469182352062234 1.5160990685282414e-11 10.819272419080352 0.15476972686226143 ASSESSYLSILPKT(ph)PEGISEEQR ddPTM_A549_MK2206_60min_R1 2 ASSESSYLSILPKTPEGISEEQR 23 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 ASSESSYLS(0.001)ILPKT(0.994)PEGIS(0.006)EEQR;ASSESSYLSILPKT(0.998)PEGIS(0.001)EEQR 108.57 7.7643e-11 24060000.0 1793.56 1756.02 1520.73 1809.77 2658.1000000000004 1652.01 1889.75 1704.7199999999998 2778.7 3154.5 2623.8999999999996 True False 2096.2690796680527 1845.3939174321495 1736.3923810456333 2253.1637312436637 2267.09701116378 1826.824601684514 2233.0931136797913 1946.3692804860455 2149.3288866720964 2441.896259104602 1972.3132140440487 1.0628479618456967 0.9356495227491466 0.8803836878856167 1.142396509438659 1.1494609451585551 0.9262345294228276 1.1322203277749365 0.986845936348615 1.089750284776064 1.2380874608134456 1.0 10.945672962375019 -6.255721919525079 24.947882724990453 1.0503882428827946 0.9572293118322001 0.19597974456527123 0.09595205656807851 523.62937440844 2284821.849435447 0.01051316974488267 0.026994789153917963 5.549809557156661e-07 6.255721919525079 -0.09315893105059458 ASSESSYLSILPKT(ph)PEGISEEQR ddPTM_A549_PD325901_60min_R1 4 ASSESSYLSILPKTPEGISEEQR 23 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 ASSESSYLSILPKT(0.999)PEGIS(0.001)EEQR;ASSESSYLSILPKT(0.748)PEGIS(0.252)EEQR;ASSESSYLSILPKT(0.999)PEGIS(0.001)EEQR;ASSESSYLS(0.001)ILPKT(0.999)PEGIS(0.001)EEQR 163.16 1.2247e-33 48877300.0 10342.3 10895.2 9973.5 10502.400000000001 12287.1 12538.5 11901.3 13471.3 12824.400000000001 12166.0 12605.400000000001 True False 11392.24268240114 11813.376740707727 10650.3616855276 11151.109395319016 11424.09648419383 12436.390613126428 12354.21048414125 13202.604353469593 12285.435066052312 11397.83668373745 11055.015712214265 1.0305044315599015 1.068598819597839 0.9633963408808566 1.0086923153803011 1.033385820661637 1.124954585038349 1.1175208435472013 1.1942637348658438 1.1112996476774433 1.03101044633925 1.0 13.432413455171023 -7.020285940351232 21.612694608160737 1.07567473424638 1.0179780318593663 0.28520414284156714 0.05478753214453803 207.72830180749523 221316.19978519098 0.010033112475762789 0.01756051507781557 9.543640239481091e-08 7.020285940351232 -0.05769670238701363 ASSFLDTSKDCSPS(ph)SPLKLDAR ddPTM_A549_MK2206_60min_R1 2 ASSFLDTSKDCSPSSPLKLDAR 22 2 Q9Y485;F5H269 Q9Y485 DMXL1 DmX-like protein 1 1 ASSFLDT(0.078)S(0.078)KDCS(0.078)PS(0.383)S(0.383)PLKLDAR;ASSFLDTSKDCS(0.08)PS(0.46)S(0.46)PLKLDAR 82.84899999999999 1.3708e-05 8017600.0 3863.0 4638.4 4329.8 4252.299999999999 6159.4 3695.4 3477.4 3484.8 6371.3 5975.9 6109.2 True False 4514.97995871768 4874.474747791754 4943.830746714657 5294.113690892998 5253.360419307844 4086.4447751920106 4109.198567805318 3978.7810717524144 4928.210722875421 4625.940039557199 4592.1170346575345 0.9832022844022296 1.0614874819180817 1.0765907552883944 1.1528699401468578 1.1439953249579193 0.8898825409611462 0.8948375088858703 0.8664372100544993 1.0731892688451377 1.0073654492349382 1.0 12.164943695658359 -7.236352871184958 24.991184576005214 1.0006698501283948 1.0858547459342052 0.3306100098446614 0.07739247645357519 1082.903292641058 1078788.393725759 0.01329322764672792 0.023019642246529533 5.8029272883360076e-08 7.236352871184958 0.08518489580581035 ASSFLDTSKDCSPSS(ph)PLKLDAR ddPTM_A549_PD325901_60min_R1 1 ASSFLDTSKDCSPSSPLKLDAR 22 2 Q9Y485;F5H269 Q9Y485 DMXL1 DmX-like protein 1 1 ASSFLDT(0.001)S(0.001)KDCS(0.025)PS(0.14)S(0.834)PLKLDAR 83.09 1.29e-05 6317900.0 2185.3 1984.2 2233.0 2074.1 2669.7 2615.5 2792.9 2726.1 1976.8 2915.6 2998.8 True False 2407.1500472671664 2151.415497550505 2384.5448081198283 2202.2124463771306 2482.1894819650097 2594.2002351662604 2899.1853378335218 2671.7257969159223 1893.721970507176 2731.50851842059 2629.966610959441 0.9152777975340954 0.8180390916695496 0.9066825404486485 0.8373537660897297 0.9438102642145253 0.9864004449166248 1.102365834513719 1.015878219055126 0.7200555180494573 1.0386095804555122 1.0 11.360828768396772 -4.927941739772896 16.274549065240496 0.8987636336708312 1.1609981661590256 0.0 0.1115884100481744 33108920.790229853 128366712.07868533 0.017698022056630337 299639883.61333156 1.1804789852596413e-05 4.927941739772896 0.2622345324881944 ASSHS(ph)SQTQGGGSVTK ddPTM_A549_MK2206_60min_R1 4 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.214)S(0.214)HS(0.286)S(0.286)QTQGGGSVTK;AS(0.225)S(0.225)HS(0.275)S(0.275)QTQGGGSVTK;AS(0.004)S(0.022)HS(0.876)S(0.097)QT(0.001)QGGGSVTK;AS(0.069)S(0.069)HS(0.428)S(0.428)QT(0.007)QGGGSVTK 125.51 7.537e-09 87048800.0 2338.78 2614.71 2751.3099999999995 2750.1499999999996 2719.9300000000003 2096.67 2288.5099999999998 2740.96 4544.240000000001 3850.9199999999996 4635.19 True False 2733.508886318854 2747.787570670616 3141.487129138415 3423.936873458923 2319.8319000694855 2318.5382277430936 2704.3026440467456 3129.499473837952 3514.976895660131 2980.994497419904 3484.1443982639707 0.7845567157551987 0.7886549053591877 0.901652391532254 0.9827195667220201 0.6658254179205023 0.6654541151906165 0.7761741004173669 0.8982117605106361 1.0088493741566862 0.8555886773536799 1.0 11.766588701464071 -8.539671797658619 3.057425884384811 1.0042172414531418 0.7967756751171514 0.3205762867349422 0.09682989281145593 0.1530598469632778 2.941225769506015 0.015878993916610604 0.01851845872118814 2.8862118293347877e-09 8.539671797658619 -0.20744156633599042 ASSHS(ph)SQTQGGGSVTK ddPTM_A549_PD325901_60min_R1 5 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.007)S(0.025)HS(0.888)S(0.08)QTQGGGSVTK;ASS(0.04)HS(0.444)S(0.444)QT(0.072)QGGGSVTK;AS(0.004)S(0.022)HS(0.411)S(0.347)QT(0.215)QGGGS(0.002)VTK;AS(0.1)S(0.1)HS(0.777)S(0.022)QTQGGGSVTK;AS(0.148)S(0.12)HS(0.705)S(0.027)QTQGGGSVTK 204.13 1.1099999999999999e-39 116058300.0 8351.81 8918.42 7545.78 8909.77 10232.8 9205.06 8706.0 9868.45 10959.1 10693.180000000002 11111.250000000002 True False 9199.679602922437 9670.006552597712 8057.882007261282 9460.10625734418 9514.083429243572 9130.097043287918 9037.311594105997 9671.616023100743 10498.527138296839 10018.010789890492 9744.636690017045 0.9440762026917953 0.9923414140728521 0.8269043027038894 0.9708013298264516 0.9763404970233868 0.9369356019851725 0.9274139079360781 0.9925065788249336 1.0773646542463837 1.0280538011389904 1.0 13.250392683046076 -8.483159727588918 4.361976522649212 1.036628995648614 0.9400746415662956 0.48283126101534646 0.043850398154940615 0.1406575869209069 5.965320023371682 0.007905194999470774 0.009410895315763074 3.2873070596860825e-09 8.483159727588918 -0.0965543540823185 ASSHSS(ph)QTQGGGSVTK ddPTM_A549_PD325901_60min_R1 1 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.001)S(0.005)HS(0.271)S(0.723)QTQGGGSVTK 163.53 3.466e-21 65108000.0 2365.2 3315.9 2790.4 2646.6 2917.0 2804.0 2646.9 3194.8 3153.7 2963.3 3248.6 True False 2605.313362831788 3595.3425301520633 2979.77332403832 2810.074471135296 2712.1199831036947 2781.1651536632376 2747.6292279392583 3131.0772077278834 3021.1609562871713 2776.19673228006 2849.04279457211 0.9144521689162879 1.2619475344497373 1.0458857724830504 0.9863223102471276 0.9519407670080368 0.9761752820848496 0.964404337194913 1.0989926910515684 1.060412627722888 0.974431390630273 1.0 11.47626157675322 -5.987048991229275 24.997073111822512 1.0180112777408195 1.1046290297944672 0.10897749681532154 0.08607041749528097 316.45307114199295 610785.0954362544 0.01074424409015776 0.03337714132408251 1.0302698927720273e-06 5.987048991229275 0.08661775205364775 ASSHSSQTQGGGS(ph)VTK ddPTM_A549_MK2206_60min_R1 3 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ASSHSS(0.001)QT(0.005)QGGGS(0.975)VT(0.018)K;ASSHSSQT(0.003)QGGGS(0.975)VT(0.022)K;ASSHS(0.001)S(0.001)QT(0.008)QGGGS(0.72)VT(0.27)K 97.49 1.197e-06 30164300.0 1889.33 2018.5099999999998 1831.05 1248.07 2198.03 1614.69 1298.95 1266.8100000000002 1850.58 2676.52 2629.19 True False 2208.2027143163536 2121.2435372467085 2090.720423292503 1553.847206027992 1874.7026987127356 1785.5554240555234 1534.952401118858 1446.3841969429168 1431.4265847690103 2071.892273076129 1976.289561047478 1.1173477600852966 1.0733465272783214 1.0579018705054404 0.7862447065724609 0.9485971770852754 0.903488769686735 0.7766839593613492 0.7318685608885677 0.724300028185304 1.048374850483944 1.0 10.948578627172742 -6.178208975521812 5.561839790134753 0.8543760443901143 1.0868594689067679 0.4741957160616609 0.1019307815941579 0.16296627711363973 8.366415144485211 0.016022601745400846 0.04329479465505997 6.634237647370769e-07 6.178208975521812 0.2324834245166536 ASSHSSQTQGGGS(ph)VTK ddPTM_A549_PD325901_60min_R1 2 ASSHSSQTQGGGSVTK 16 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ASSHSSQT(0.019)QGGGS(0.899)VT(0.081)K;ASSHSS(0.001)QT(0.007)QGGGS(0.926)VT(0.065)K 62.001999999999995 0.0011573 5163200.0 879.96 612.28 565.44 634.6999999999999 937.53 715.46 884.79 909.95 951.99 815.4300000000001 1077.17 True False 969.2928914076856 663.8789843968465 603.8141586669399 673.903977491714 871.6811271029167 709.6335309700074 918.4611676256657 891.8003334080341 911.9811709344013 763.9436106378457 944.6849187432244 1.0260488679095234 0.7027517548179426 0.6391698932488866 0.7133637513640549 0.9227215443034388 0.7511854131365608 0.9722407433449388 0.9440188106257205 0.9653813169238152 0.808675565239434 1.0 9.883689416500978 -7.752002876459063 1.1860468453341217 0.9844247333815914 0.770823308443486 0.20527896741909835 0.11756842786680943 0.2981960152388523 0.8488578617646877 0.017587465343978582 0.0290434588681071 1.7700972344081716e-08 7.752002876459063 -0.2136014249381054 ASSKGGGGYT(ph)CQSGSGWDEFTK ddPTM_A549_PD325901_60min_R1 1 ASSKGGGGYTCQSGSGWDEFTK 22 1 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 AS(0.286)S(0.286)KGGGGY(0.003)T(0.392)CQS(0.033)GS(0.001)GWDEFTK 73.805 8.4908e-05 3293800.0 3200.3 3110.7 3177.1 3444.4 3343.5 3139.0 3235.5 2529.1 4248.2 4259.7 5996.5 True False 3525.1921000636603 3372.8496060026 3392.7171114543244 3657.152765200034 3108.6640944488213 3113.437024732134 3358.628723033537 2478.655116459431 4069.662927513447 3990.7418150350504 5258.968514945408 0.6703200618230464 0.6413519298351632 0.6451297629587621 0.6954125613809646 0.5911166962902213 0.5920242754608798 0.6386478096396061 0.47131963414790695 0.7738519285574564 0.7588449719167937 1.0 12.360564144198303 -9.575597934650522 0.940312185241303 0.9613852568368617 0.6231096976878517 0.4943298969562383 0.09130851079914853 0.1499685385786979 0.2787257096048296 0.022434217080118387 0.015124014901532371 2.6570643063740783e-10 9.575597934650522 -0.33827555914901 ASSLNFLNKS(ph)VEEPTQPGGTGLSDSR ddPTM_A549_MK2206_60min_R1 1 ASSLNFLNKSVEEPTQPGGTGLSDSR 26 1 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 ASSLNFLNKS(1)VEEPTQPGGTGLSDSR 118.05 1.2257999999999999e-17 3038100.0 1363.9 1321.1 1376.7 1295.2 1766.3 1485.0 1272.1 1272.6 2079.4 2087.6 1826.7 True False 1594.0929758465038 1388.3383471256666 1571.9367612827539 1612.5240581437372 1506.479609803462 1642.1417143367787 1503.2241036708874 1452.9949471740465 1608.419220119465 1616.0097100988319 1373.0799756447514 1.1609614910435004 1.0111125147490045 1.1448253482428263 1.1743846583929323 1.0971535791977962 1.1959548922601433 1.0947826276215447 1.058201250434644 1.1713951471502644 1.1769232228006303 1.0 10.423199942999116 -10.938151751774404 1.1137717444842756 0.9977398741824108 1.1251257289469043 0.0 0.07377473085778466 0.39228792158044234 0.8388388111634957 0.039876260599488 0.008680960770602169 1.153050287006794e-11 10.938151751774404 0.1273858547644935 ASSLNFLNKS(ph)VEEPTQPGGTGLSDSR ddPTM_A549_PD325901_60min_R1 2 ASSLNFLNKSVEEPTQPGGTGLSDSR 26 1 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 ASSLNFLNKS(1)VEEPTQPGGTGLSDSR;ASSLNFLNKS(0.996)VEEPT(0.003)QPGGTGLSDSR 142.37 1.0442e-32 20101400.0 3558.2 3747.0 4392.4 4141.0 5334.5 4569.5 4264.8 5607.3 4701.2 4483.5 4685.6 True False 3919.4258445916025 4062.7728400976434 4690.494677646901 4396.78016510665 4959.823123025937 4532.287507012896 4427.099297788108 5495.458002658251 4503.624912863381 4200.411044841102 4109.300904465638 0.9537938290993254 0.988677377137938 1.1414337345190932 1.0699581917519363 1.2069749181998388 1.1029339569870855 1.0773363646787495 1.3373218779589138 1.0959589033670483 1.0221716886871082 1.0 12.004677260698429 -5.628615717269737 5.835282464072004 1.0887002903342984 0.9624732506112337 0.23373152235526573 0.09134404855042043 0.25200295725005006 11.79249983524589 0.013701795360896621 0.055159722286907374 2.3517127987066486e-06 5.628615717269737 -0.1262270397230647 ASSNKDFT(ph)PNR ddPTM_A549_MK2206_60min_R1 2 ASSNKDFTPNR 11 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 ASSNKDFT(1)PNR;ASSNKDFT(1)PNR 84.58 0.00020032 111893000.0 17163.6 19972.8 18896.1 18976.1 21040.3 15467.6 16250.1 16722.6 22124.3 27232.0 28559.0 True False 20060.396070268394 20989.33020927372 21575.851118526225 23625.245351869497 17945.299741916868 17104.371165438082 19202.532825298556 19093.079760814664 17113.18137524721 21080.272286554617 21467.01211169786 0.9344754624392759 0.9777480955459172 1.005070058481453 1.1005371976752911 0.8359477158974569 0.796774654825742 0.8945135319896085 0.8894148687981787 0.7971850617218338 0.9819844595451409 1.0 14.389833783060585 -6.776162015600417 24.998162713825124 0.8880766637758514 1.0025936378435967 0.39435903773736913 0.0710697479749875 233.99152695813572 397303.615503814 0.012625609880315336 0.023930845710453386 1.6743181472399154e-07 6.776162015600417 0.1145169740677453 ASSNKDFT(ph)PNR ddPTM_A549_PD325901_60min_R1 4 ASSNKDFTPNR 11 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 AS(0.002)S(0.007)NKDFT(0.991)PNR;ASSNKDFT(1)PNR;AS(0.012)S(0.042)NKDFT(0.946)PNR;ASSNKDFT(1)PNR 88.021 0.0011756 217888800.0 19156.0 18594.5 18783.2 17684.8 21949.300000000003 20136.2 21310.9 21585.5 23996.000000000004 21229.5 24644.8 True False 21100.703018098124 20161.52377240343 20057.940904557265 18777.149930905114 20407.65688897428 19972.21746333584 22121.89796127193 21154.960269002848 22987.531568337803 19889.065746950873 21613.64583625892 0.9762676402654713 0.9328145711807947 0.928022095694202 0.8687636539044553 0.944202428575864 0.924055923495821 1.0235153351203883 0.9787779641282647 1.0635656632151371 0.9202087374627514 1.0 14.399654829176114 -7.763532379503156 21.921156476106937 1.0256782081722466 0.9270991316515859 0.28518254178660585 0.044291208211488166 5.4080205359284825 56643.58744895376 0.005411472340959516 0.0076871151775007186 1.7237235713339434e-08 7.763532379503156 -0.09857907652066078 ASSNKDFT(ph)PNRDK ddPTM_A549_MK2206_60min_R1 2 ASSNKDFTPNRDK 13 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 AS(0.104)S(0.097)NKDFT(0.799)PNRDK;AS(0.145)S(0.133)NKDFT(0.722)PNRDK 49.993 0.010089 38121000.0 4311.2 4529.0 3954.2 4015.5 4839.6 4407.8 4315.7 3481.9 5666.9 6042.2 6720.5 True False 5038.825161279749 4759.506755076936 4514.965018859786 4999.297680262648 4127.701250979355 4874.230470339164 5099.806826674357 3975.4699878715332 4383.356198179759 4677.262823509854 5051.614373635824 0.9974682920329744 0.9421753924679235 0.8937667614581212 0.9896435694604452 0.8171053737834115 0.9648856998621232 1.009540010276724 0.7869702027572322 0.8677139373615536 0.9258946700128781 1.0 12.302528796614656 ASSNKDFT(ph)PNRDK ddPTM_A549_PD325901_60min_R1 3 ASSNKDFTPNRDK 13 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 AS(0.002)S(0.003)NKDFT(0.994)PNRDK;AS(0.017)S(0.078)NKDFT(0.904)PNRDK;AS(0.039)S(0.039)NKDFT(0.922)PNRDK 69.805 0.0010765999999999998 46287200.0 11874.8 11183.4 10907.2 11681.5 12694.400000000001 11662.099999999999 10910.1 11879.5 12388.4 12244.5 14280.9 True False 13080.320954234277 12125.864366145717 11647.428182321806 12403.039724388631 11802.789137302563 11567.127724156937 11325.2898257358 11642.554053212532 11867.758629821468 11471.380180340555 12524.43983408387 1.0443837111690726 0.9681761840674523 0.9299759778976002 0.990306942960845 0.9423806009417351 0.9235644769260086 0.9042551982975943 0.929586808467762 0.9475680179743194 0.9159196205424269 1.0 13.612458458685577 -3.9301669900828955 15.631187885839825 0.9638582385171937 0.9610888716211516 0.0 0.041595647404302494 0.0 0.0 0.0054999151200279825 0.0 0.00011744458832432427 3.9301669900828955 -0.0027693668960420137 ASSPAES(ph)SPEDSGYMR ddPTM_A549_MK2206_60min_R1 1 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 ASS(0.024)PAES(0.961)S(0.015)PEDSGYMR 214.23 2.4553999999999998e-46 10281000.0 1201.4 940.93 1061.4 762.58 972.42 696.82 945.83 690.09 1267.5 1338.8 1170.4 True False 1404.1669485900647 988.8193179630251 1211.9224801521866 949.4121342335169 829.3783061569845 770.5570298883198 1117.6750679781746 787.9123708119898 980.413273781582 1036.364150163018 879.757378603284 1.5960843099939 1.1239682007929157 1.3775644395006414 1.0791749604201306 0.9427352657998935 0.8758744724729307 1.2704355713988014 0.8956018897652115 1.1144132434991347 1.1780113192211756 1.0 9.78096189881187 -2.000000000000773 0.651623893270312 1.0413209004394892 48.44980206143481 0.5402334543300997 0.14088055191280735 105.15104893722597 0.6219452758271676 0.020898584157921875 7209.953361260723 0.009999999999982197 2.000000000000773 47.40848116099532 ASSPAES(ph)SPEDSGYMR ddPTM_A549_PD325901_60min_R1 1 ASSPAESSPEDSGYMR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 AS(0.007)S(0.217)PAES(0.674)S(0.103)PEDSGYMR 102.73 1.1118999999999999e-06 8849100.0 895.37 826.14 620.96 817.03 1140.0 748.87 821.37 1050.8 966.69 697.4 1034.9 True False 986.2673032634439 895.7617171385826 663.1020797358215 867.4960874902405 1059.930332786498 742.7714510070574 852.6276848209101 1029.8409696633466 926.0633810550287 653.3660449809714 907.6138607716174 1.0866595871783606 0.9869414250428497 0.7305993312751728 0.9557986330802943 1.1678207865681856 0.8183782587625783 0.9394167736663251 1.1346686230505743 1.02032749948059 0.7198722642088183 1.0 9.825934831303465 ASSPPDRIDIFGR ddPTM_A549_PD325901_60min_R1 2 ASSPPDRIDIFGR 13 1 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 0 ; 97.86 0.00016379 4663900.0 1395.6 1464.08 1496.3200000000002 1724.57 1482.42 1668.77 1342.87 1686.35 1564.5 1332.01 1729.9099999999999 False True 1537.2802846135812 1587.4631597892064 1597.8692733031187 1831.0927721173553 1378.2999332713673 1655.18009039893 1393.9736526966603 1652.7144263340163 1498.7495056953032 1247.9066612777515 1517.1420368030035 1.0132738051692338 1.046351047746582 1.05321007166226 1.2069356248119816 0.9084844397138905 1.0909855835824094 0.918815522134045 1.089360380400966 0.9878768561798881 0.8225377921156294 1.0 10.567140443548798 -6.78229788375872 24.99994618735928 0.9981516073812547 1.075633894273004 0.22370289398624277 0.08775487391734506 250.5186327052054 300258.3858139415 0.009072640750632839 0.017159147226407722 1.6508291016717782e-07 6.78229788375872 0.07748228689174919 ASSPS(ph)PLTIGTPESQR ddPTM_A549_MK2206_60min_R1 2 ASSPSPLTIGTPESQR 16 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 ASS(0.005)PS(0.994)PLT(0.001)IGTPESQR;ASS(0.001)PS(0.999)PLTIGTPESQR 328.73 1.0435999999999997e-166 47691000.0 8866.2 10394.4 9275.2 8357.099999999999 11507.099999999999 10278.1 8347.4 9278.1 12927.5 11909.3 12105.8 True False 10362.597802221775 10923.430561927958 10590.562830137149 10404.58987516447 9814.42083336319 11365.72171994939 9864.01452950426 10593.299087989573 9999.44189097546 9218.980858631936 9099.595756916971 1.138797599260906 1.2004303107228271 1.1638498141070535 1.1434123177675801 1.078555695828889 1.249035893853839 1.0840057946537047 1.1641505151409806 1.09888858341586 1.0131198247597115 1.0 13.151586740693737 -9.834641504906452 0.4317114297933801 0.9860375252624108 1.1639860983470993 0.5983122747564817 0.04568582246429325 0.5453024246592848 0.2060456935011911 0.04023633192238391 0.014342558929137016 1.4633846495040765e-10 9.834641504906452 0.17794857308468848 ASSPS(ph)PLTIGTPESQR ddPTM_A549_PD325901_60min_R1 2 ASSPSPLTIGTPESQR 16 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 ASSPS(1)PLTIGTPESQR;ASSPS(1)PLTIGTPESQR 325.77 1.3155999999999994e-164 70046000.0 14939.5 15270.3 14739.7 15439.7 15461.6 14941.7 15207.8 14571.7 17319.3 16097.0 17377.3 True False 16456.14704212137 16557.181772122512 15740.024679016498 16393.37520289716 14375.6305556243 14820.019749104838 15786.541151027475 14281.056012222496 16591.43005048811 15080.6326728688 15240.002263780683 1.0797995142842578 1.0864290887588797 1.0328098648924853 1.0756806278078828 0.9432827047401007 0.9724420963063783 1.0358621263820738 0.9370770269609989 1.0886763507850143 0.9895426793150391 1.0 13.895575496681532 -5.93856767832058 1.70888309120156 1.0242955504646472 1.085548191265366 0.21080903304905108 0.048309983158307625 0.6266381143312932 3.3452848310691983 0.007776177769215404 0.040756665003562224 1.1519465321438986e-06 5.93856767832058 0.061252640800718794 ASSPS(ph)PLTIGTPESQRK ddPTM_A549_MK2206_60min_R1 1 ASSPSPLTIGTPESQRK 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 AS(0.01)S(0.034)PS(0.944)PLT(0.012)IGTPESQRK 77.391 0.00016605 4265600.0 1775.0 1816.6 1890.9 1764.3 2446.5 1499.6 2215.8 2009.0 2944.9 1998.2 2845.3 True False 2074.576605416485 1909.057180674047 2159.0580532502076 2196.5535792024375 2086.623090858954 1658.2866766460827 2618.382178220231 2293.7819023044635 2277.8848520389597 1546.805232189829 2138.7334837149033 0.970002396845174 0.8926110687518125 1.0095030866118022 1.0270347361781154 0.9756349291518851 0.7753591970541829 1.2242676322961918 1.0724954370285757 1.0650625098375304 0.7232342150004982 1.0 11.06254099826416 -7.760345505325829 24.999999981454337 1.0484979398175702 0.947964575723438 0.05289958685863705 0.12934832704219293 32.70123755477338 747359.5186460458 0.01321088177550639 0.01898670202170095 1.7364188616822663e-08 7.760345505325829 -0.10053336409413227 ASSRS(ph)PVFTPR ddPTM_A549_MK2206_60min_R1 2 ASSRSPVFTPR 11 1 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 AS(0.013)S(0.068)RS(0.918)PVFT(0.001)PR;AS(0.006)S(0.036)RS(0.958)PVFTPR 84.17299999999999 0.00015114 124482000.0 3826.1000000000004 3474.2 4042.2999999999997 2729.0 4669.8 3947.8 3176.8 3318.5 4898.5 5264.5 5501.200000000001 True False 4471.8521408360675 3651.021940492005 4615.5589236095575 3397.6051225094666 3982.878606046656 4365.553575662446 3753.9834388347417 3788.9075374800213 3788.9975712971036 4075.245793645957 4135.100214603882 1.0814374280562495 0.8829343307322363 1.1161903422095663 0.8216500075403703 0.9631879275816275 1.055731022006353 0.907833726877246 0.9162794952583698 0.9163012683261093 0.9855252792310721 1.0 12.0137065783537 -6.244668429594905 24.98690756536311 0.9523303792708078 1.012462035198889 0.16402201983723708 0.07870171084115886 1440.3909144044874 2146024.4764169734 0.010309868631576926 0.02719158223697583 5.692873982932117e-07 6.244668429594905 0.06013165592808134 ASSRS(ph)PVFTPR ddPTM_A549_PD325901_60min_R1 1 ASSRSPVFTPR 11 1 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 AS(0.014)S(0.127)RS(0.859)PVFTPR 84.566 0.00014139 111210000.0 2364.1 1720.4 1970.6 2600.8 2764.8 2666.9 2443.1 2325.8 2728.2 2478.7 3383.2 True False 2604.1016916415647 1865.384145744326 2104.3367661804455 2761.4455091546406 2570.6099860422005 2645.181650607877 2536.0735074156173 2279.4100944451975 2613.543241571061 2322.194458982412 2967.0878478718114 0.8776624842804691 0.62869191658154 0.7092263101309295 0.9306921974471801 0.8663747478477961 0.8915076958389263 0.8547348907227854 0.7682314145434348 0.8808445774349636 0.7826510632801253 1.0 11.534831926617715 -14.999999918542287 0.05548052382170465 1.7414636564657902 0.48752125937299456 0.0 0.10372695172704009 202.8543324678147 0.8546216317139348 21.132774859181918 4.252351476164201 1.0000001875633343e-15 14.999999918542287 -1.2539423970927956 ASSRVS(ph)GSFPEDSSK ddPTM_A549_MK2206_60min_R1 2 ASSRVSGSFPEDSSK 15 1 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 AS(0.023)S(0.019)RVS(0.931)GS(0.027)FPEDSSK;AS(0.002)S(0.007)RVS(0.978)GS(0.014)FPEDSSK 115.47 2.8415e-07 27679000.0 9071.6 10026.3 9346.8 10033.3 11942.099999999999 8765.7 7645.4 8142.5 13368.2 14293.099999999999 13573.9 True False 10602.664300673912 10536.595844210178 10672.316786778276 12491.458950411952 10185.432909604206 9693.280555799265 9034.470216339445 9296.72431036043 10340.324044628756 11064.27878301093 10203.12600941824 1.0391584197712416 1.0326831046175575 1.0459850027263153 1.224277632059176 0.9982659138191862 0.950030465844649 0.8854610055780906 0.9111643139346576 1.0134466667454536 1.084400876045026 1.0 13.316723608937595 -6.968389527218872 24.99993763351959 0.9845385340561649 1.0829702891526922 0.35663628593859853 0.06955842633282484 181.8461735492005 143816.89164284675 0.009743861121108364 0.018414076545279788 1.0755001437757223e-07 6.968389527218872 0.09843175509652735 ASSRVS(ph)GSFPEDSSK ddPTM_A549_PD325901_60min_R1 2 ASSRVSGSFPEDSSK 15 1 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 AS(0.201)S(0.201)RVS(0.529)GS(0.069)FPEDSSK;AS(0.126)S(0.126)RVS(0.511)GS(0.237)FPEDSSK 99.34299999999999 2.7525999999999997e-06 65073000.0 10605.5 9986.8 9124.8 9986.8 11473.5 10039.5 10123.6 10937.900000000001 11537.0 12867.5 12851.5 True False 11682.16255264354 10828.422684677651 9744.063799879903 10603.661954331583 10667.640941426214 9957.741640585617 10508.85913784648 10719.735003883445 11052.140010998219 12055.043854018715 11270.846972370711 1.036493759633249 0.9607461365789441 0.8645369619307621 0.9408043583880908 0.946480860540189 0.8834954165375474 0.9323930281023101 0.9511028789727818 0.9805953392936103 1.0695774579825614 1.0 13.46030831359781 -8.759867628127767 1.952726276373289 0.9924923854892447 0.9343879129212528 0.3149877240961192 0.047504784321091884 0.3116978915323989 2.3287434302923646 0.007794161022495342 0.008410597973955464 1.7383305868273859e-09 8.759867628127767 -0.058104472567991894 ASSSGPRS(ph)PLDQR ddPTM_A549_MK2206_60min_R1 4 ASSSGPRSPLDQR 13 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 AS(0.02)S(0.016)S(0.057)GPRS(0.906)PLDQR;ASSSGPRS(0.999)PLDQR;AS(0.081)S(0.069)S(0.415)GPRS(0.435)PLDQR;ASS(0.001)S(0.01)GPRS(0.988)PLDQR 145.06 1.5802e-12 490279000.0 10765.4 11470.9 10405.9 10394.199999999999 13186.800000000001 10370.7 9567.6 9866.5 15416.2 15928.1 15401.899999999998 True False 12582.33633123979 12054.71981382469 11881.613092345613 12940.77946661337 11247.039188448336 11468.12059048648 11305.909074979627 11265.106589889005 11924.455314612716 12329.931147454117 11577.183159184817 1.0868219115335953 1.0412480866955116 1.0262956825485892 1.1177830814870315 0.9714832212467366 0.99057952463922 0.9765682134872357 0.9730438255139615 1.0299962564859648 1.065019960202677 1.0 13.49899665389378 -6.77504009381879 24.999960286215966 1.0041374733000827 1.063142159042031 0.4695249256293076 0.03404923762578164 156.7043239853092 288043.9078586891 0.004406247280369848 0.008360484510910612 1.678649039047321e-07 6.77504009381879 0.05900468574194817 ASSSGPRS(ph)PLDQR ddPTM_A549_PD325901_60min_R1 4 ASSSGPRSPLDQR 13 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 AS(0.001)S(0.002)S(0.008)GPRS(0.99)PLDQR;ASSSGPRS(1)PLDQR;AS(0.004)S(0.004)S(0.007)GPRS(0.985)PLDQR;ASSS(0.002)GPRS(0.998)PLDQR 128.15 4.3619e-08 685801000.0 46169.2 44688.5 44753.8 45615.9 54031.4 48966.2 45503.6 48436.5 50366.1 53371.9 54369.2 True False 50856.26319603132 48454.556729304364 47791.06199446181 48433.49054177452 50236.42086221083 48567.43550189185 47235.26439852537 47470.39600980085 48249.38796983076 50001.98912549459 47682.133074755264 1.0665685429026364 1.0161994358209208 1.0022844808460176 1.015757631183179 1.0535690755162106 1.0185667538352075 0.9906281735439708 0.9955594045127457 1.011896592255765 1.0486525224679504 1.0 15.541161156195509 -7.530332700057692 22.98283331400583 1.0038577278184766 1.02847574137214 0.15356789978030883 0.022175210154837734 62.40787515105624 192422.4480715198 0.0026857574205118966 0.0039902066061405 2.9489492590011597e-08 7.530332700057692 0.02461801355366333 ASSSKES(ph)PSPSVR ddPTM_A549_MK2206_60min_R1 1 ASSSKESPSPSVR 13 1 H0Y517;H7C1U3;Q5T0F9-3;Q5T0F9-2;Q5T0F9 H0Y517 CC2D1B Coiled-coil and C2 domain-containing protein 1B 1 AS(0.258)S(0.232)S(0.232)KES(0.267)PS(0.009)PS(0.002)VR 40.725 0.056142 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASSSKESPS(ph)PSVR ddPTM_A549_MK2206_60min_R1 1 ASSSKESPSPSVR 13 1 H0Y517;H7C1U3;Q5T0F9-3;Q5T0F9-2;Q5T0F9 H0Y517 CC2D1B Coiled-coil and C2 domain-containing protein 1B 1 AS(0.014)S(0.013)S(0.012)KES(0.339)PS(0.569)PS(0.052)VR 42.095 0.024464 18305000.0 2751.1 3289.6 2665.9 2874.0 3385.7 2640.9 2792.5 2687.7 4059.1 4783.0 4640.2 True False 3215.4184220627008 3457.0265889823554 3043.9647068378686 3578.1301290187616 2887.6680150096713 2920.358285112458 3299.861103294519 3068.6897057360416 3139.7203310507466 3702.5169780622336 3487.9102769950073 0.921875325541037 0.9911455038805472 0.8727187528058726 1.0258664486351072 0.8279077687449943 0.8372802203009875 0.9460854326039313 0.8798075242863921 0.9001723329178518 1.0615287332597672 1.0 11.768147213366595 -10.689506261953587 0.9317988001514389 1.0004526105926719 0.9113301530911557 0.338911851700579 0.06057562130287448 0.6485139097775058 0.9938279013928565 0.03874644826167041 0.009991899252505045 2.0440604631341727e-11 10.689506261953587 -0.08912245750151615 ASST(ph)PSSETQEEFVDDFR ddPTM_A549_MK2206_60min_R1 2 ASSTPSSETQEEFVDDFR 18 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H367;F5H270 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 AS(0.013)S(0.024)T(0.765)PS(0.133)S(0.024)ET(0.042)QEEFVDDFR;AS(0.011)S(0.064)T(0.483)PS(0.118)S(0.118)ET(0.206)QEEFVDDFR 89.866 6.5327999999999995e-06 5311100.0 1578.61 2071.21 1584.96 1412.85 2541.0 1439.0 1884.23 1968.67 2693.6 2658.8999999999996 2588.8 True False 1845.0407746909964 2176.6257421468113 1809.731160864904 1758.9983134252461 2167.2222660423454 1591.2740248691077 2226.570201131827 2247.735001299018 2083.503900795321 2058.2526433137514 1945.9295127547682 0.948153960663792 1.118553230155524 0.9300085892129494 0.9039373224444848 1.1137208474598357 0.817744946278352 1.1442193494356165 1.1550957969268871 1.0706985464472425 1.0577220962130187 1.0 10.926243737103361 ASSTS(ph)TPEPTR ddPTM_A549_MK2206_60min_R1 4 ASSTSTPEPTR 11 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 ASST(0.043)S(0.622)T(0.335)PEPTR;ASST(0.077)S(0.791)T(0.131)PEPTR;AS(0.003)S(0.016)T(0.081)S(0.45)T(0.45)PEPTR;AS(0.002)S(0.012)T(0.072)S(0.456)T(0.456)PEPTR 193.22 1.4177999999999998e-19 554242900.0 5935.36 6245.450000000001 4436.86 5547.539999999999 7006.29 5337.09 5508.889999999999 6321.46 8510.0 9187.609999999999 9668.220000000001 True False 6937.1036623801665 6563.316728526221 5066.073464563814 6906.6875490385355 5975.674022176239 5901.857321326383 6509.7840047728305 7217.546313659325 6582.498587677524 7112.122519927731 7267.334144702531 0.9545596121291486 0.9031257676944029 0.6971020409535854 0.9503742928998405 0.822264932806504 0.8121076042207991 0.895759555726234 0.993149092906441 0.9057652306349209 0.978642563877713 1.0 12.82721052617385 -8.0354659232994 5.522135179291354 0.9567913722545476 0.8539505869689948 0.34984541385432055 0.07102836165428215 0.18050678459872468 15.013204010837455 0.011456658525515088 0.01511950260331258 9.215821973870151e-09 8.0354659232994 -0.10284078528555274 ASSTS(ph)TPEPTR ddPTM_A549_PD325901_60min_R1 2 ASSTSTPEPTR 11 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 ASS(0.003)T(0.035)S(0.82)T(0.141)PEPTR;ASS(0.002)T(0.063)S(0.807)T(0.128)PEPTR 197.43 6.871699999999999e-24 658970000.0 9009.4 8633.1 9218.3 8782.599999999999 10686.3 8647.3 8344.9 9002.0 9780.6 8520.0 9452.3 True False 9924.02765563026 9360.64163486709 9843.909272141074 9325.081255268211 9935.731153733635 8576.87925580318 8662.469736004497 8822.448048067612 9369.555394952693 7982.045745967705 8289.727023066534 1.1971477019709107 1.1291857510893528 1.1874829225075758 1.1248960586181858 1.1985595093887917 1.0346395281699423 1.0449644134120206 1.0642627946033394 1.1302610289677197 0.9628840278765884 1.0 13.017108879874993 -7.264457398744411 24.997079076597018 1.0601151230297305 1.1640766987847415 0.6321355886066524 0.04716222129663666 170.4501693027113 1411775.0063280547 0.007514948309084175 0.012329872969837752 5.4392948478727146e-08 7.264457398744411 0.10396157575501097 ASSTST(ph)PEPTR ddPTM_A549_PD325901_60min_R1 2 ASSTSTPEPTR 11 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 AS(0.013)S(0.012)T(0.063)S(0.399)T(0.512)PEPT(0.001)R;AS(0.085)S(0.085)T(0.085)S(0.072)T(0.673)PEPTR 56.403999999999996 0.016121 4626200.0 645.21 893.51 901.05 806.5600000000001 708.77 1031.18 689.96 887.76 1091.67 713.58 1175.01 True False 710.7112442215024 968.8092234736174 962.2006714538161 856.3793793693352 658.9884403237593 1022.7824119666394 716.216805360599 870.0529303657524 1045.790906284686 668.5244370196754 1030.491219002086 0.6896819993378942 0.9401431138945555 0.9337301024123219 0.8310399580101631 0.6394896222035885 0.9925192889630717 0.695024656351923 0.8443089221160954 1.0148469846229413 0.6487434581607261 1.0 10.009116496132057 -8.732989839615282 5.8825238356043785 1.007201681896687 0.8235339700117686 0.0 0.15119897369087842 0.12648375797811998 12.63985463820106 0.016956135944232155 0.018944241051098213 1.8493118834016186e-09 8.732989839615282 -0.18366771188491826 ASSVGVLS(ph)PQKK ddPTM_A549_MK2206_60min_R1 2 ASSVGVLSPQKK 12 1 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 ASSVGVLS(1)PQKK;ASSVGVLS(1)PQKK 129.93 3.1855e-08 208377000.0 12846.3 12291.3 14159.5 11729.8 17265.4 13774.0 14054.4 13336.0 19808.0 18026.7 19459.9 True False 15014.441378119314 12916.874669612977 16167.530014805814 14603.601526570736 14725.682531337074 15231.555537558785 16607.902556899728 15226.418839787135 15321.519626876183 13954.455949913117 14627.469764082396 1.0264551299902271 0.8830559815156981 1.105285485156498 0.9983682593164357 1.006714269032081 1.0412980360389952 1.1353913441462216 1.0409468681436247 1.0474483881346328 0.9539897313052831 1.0 13.83639261556659 -5.761771491636598 24.99999998566737 1.0343467067694763 0.9547555775795157 0.2352753921447318 0.056795077262393065 8.142207345685325 613167.8862524424 0.006877700668033544 0.023522489158378748 1.7307267587931376e-06 5.761771491636598 -0.07959112918996059 ASSVGVLS(ph)PQKK ddPTM_A549_PD325901_60min_R1 5 ASSVGVLSPQKK 12 1 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 ASSVGVLS(1)PQKK;ASSVGVLS(1)PQKK;ASSVGVLS(1)PQKK;ASSVGVLS(1)PQKK;ASSVGVLS(1)PQKK 132.05 2.5502e-08 310190100.0 21176.2 21646.1 24083.800000000003 21800.2 25682.2 24882.3 25375.2 23202.100000000002 25639.399999999998 24232.399999999998 25765.7 True False 23325.992234905505 23470.292813994543 25718.271495654422 23146.74884215356 23878.370870780167 24679.666798500286 26340.867121842242 22739.315913804665 24561.86518141524 22702.36212847273 22596.682242229446 1.0322750917527663 1.0386610106032497 1.1381436982634223 1.0243428036924878 1.0567202129415025 1.0921809907287225 1.1656962221035942 1.0063121510514788 1.0869677644762024 1.0046767877297396 1.0 14.463823344045881 -10.826365528498675 0.8506981062175363 0.9954493231762062 1.0731307848946046 0.248798655012484 0.046064794840712506 0.7875897896760023 0.9094497620017568 0.04148818357900214 0.008092786031390796 1.4915385121252222e-11 10.826365528498675 0.0776814617183984 ASSVST(ph)KESPAR ddPTM_A549_PD325901_60min_R1 1 ASSVSTKESPAR 12 1 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 AS(0.026)S(0.016)VS(0.109)T(0.577)KES(0.272)PAR 60.55 0.0034258 788320000.0 3540.1 3114.6 2596.8 3330.2 3067.7 3065.7 3331.0 3092.2 2902.5 2651.6 3477.6 True False 3899.488345916123 3377.078272689649 2773.0344638269453 3535.89889056705 2852.23533499047 3040.7339556295956 3457.763027793139 3030.5236452160266 2780.5180187156407 2484.177523475113 3049.877246322713 1.278572227986487 1.107283342882553 0.9092282212900334 1.1593577724580035 0.9351967651909457 0.9970020791151049 1.1337384256898275 0.9936543016181976 0.9116819445989693 0.814517215888058 1.0 11.574535461866997 -2.0000000017630724 0.7541243348999465 0.9779879370311378 56.229349119317284 0.45521643861793604 0.09489839248599241 214.22085716627203 0.8493521915732045 0.01292196574084553 20138.443882262494 0.009999999959403759 2.0000000017630724 55.251361182286146 ASSVSTKES(ph)PAR ddPTM_A549_MK2206_60min_R1 4 ASSVSTKESPAR 12 1 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASSVS(0.029)T(0.238)KES(0.732)PAR;ASSVS(0.001)T(0.005)KES(0.994)PAR;ASSVS(0.029)T(0.151)KES(0.819)PAR;ASSVS(0.005)T(0.14)KES(0.855)PAR 92.52799999999999 7.441300000000001e-05 1012347000.0 9098.11 9228.880000000001 9333.160000000002 7857.34 11969.24 8708.36 8975.27 8327.94 12106.2 12738.8 13126.699999999999 True False 10633.64854056664 9698.590572266387 10656.742429675132 9782.388652729393 10208.580651556354 9629.872875058476 10605.960381223336 9508.450998246615 9364.165029628864 9861.096232519167 9866.978111510356 1.0777006313779012 0.9829342340338694 1.080041154367564 0.9914270146518025 1.034620786241281 0.9759698223942258 1.0748944875889528 0.963663939535297 0.9490408232187185 0.999403882432421 1.0 13.26839259314605 -8.290862326760246 24.881702627841356 0.9743431634993892 1.0276060605404438 0.3111546041448148 0.037605213235756184 573.3855229816259 484885.9896246024 0.005856939834864179 0.007081091917316173 5.11844066620386e-09 8.290862326760246 0.05326289704105458 ASSVSTKES(ph)PAR ddPTM_A549_PD325901_60min_R1 6 ASSVSTKESPAR 12 1 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASSVS(0.005)T(0.014)KES(0.981)PAR;ASSVS(0.002)T(0.009)KES(0.989)PAR;ASSVS(0.029)T(0.239)KES(0.732)PAR;ASSVS(0.002)T(0.009)KES(0.989)PAR;ASSVSTKES(1)PAR;ASSVST(0.003)KES(0.996)PAR 115.09 7.5623000000000004e-06 188722200.0 19973.8 19861.2 18098.4 18976.5 20618.4 20529.8 19819.3 20638.3 21538.5 21677.699999999997 23857.099999999995 True False 22001.525472065587 21534.973026887463 19326.666258520334 20148.63530624157 19170.234713618524 20362.61211543349 20573.534307037113 20226.652916066858 20633.311747151347 20308.96632246057 20922.827942617212 1.051556010134328 1.02925728233053 0.9237119528739376 0.9629977057356234 0.9162353562431743 0.9732246602266116 0.9833056202279123 0.9667265329304586 0.9861626642316282 0.9706606763750953 1.0 14.352790239884744 -9.315885443639308 1.0936435102150972 0.9967124757400182 0.9735971133542801 0.0 0.038096669951014836 1.0119665231051276 2.533415635538609 0.009819815437480046 0.007999860642609536 4.831862380530081e-10 9.315885443639308 -0.02311536238573808 ASSVSTKES(ph)PARK ddPTM_A549_MK2206_60min_R1 4 ASSVSTKESPARK 13 2 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASSVST(0.002)KES(0.998)PARK;ASSVS(0.001)T(0.001)KES(0.998)PARK;ASSVSTKES(1)PARK;ASSVSTKES(0.999)PARK 135.57 4.339e-09 1946769000.0 32330.699999999997 34583.0 33636.4 30672.0 39362.4 30769.5 31805.7 30337.0 43992.0 41131.8 45961.1 True False 37787.33175027535 36343.126984063965 38406.547306756205 38186.64137691842 33572.24310305598 34025.50806685895 37584.383990350725 34637.36265316603 34027.88224078845 31840.097812724263 34547.69040817101 1.0937730222723694 1.05196980043182 1.1116965230669233 1.1053312370741504 0.971765194906218 0.9848851736500291 1.087898598902041 1.0025956075192166 0.9849538952896366 0.921627392064207 1.0 15.076301645935695 -6.7570799891003706 24.999939230215713 0.9989612146373503 1.0894270168945837 0.5811347633750625 0.03955369637327335 54.22892759084127 310983.79288169683 0.0046679465213566055 0.009458259064390503 1.7495244285472237e-07 6.7570799891003706 0.09046580225723333 ASSVSTKES(ph)PARK ddPTM_A549_PD325901_60min_R1 3 ASSVSTKESPARK 13 2 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASSVS(0.003)T(0.003)KES(0.993)PARK;ASSVS(0.008)T(0.052)KES(0.94)PARK;ASSVSTKES(1)PARK 106.82 2.9311999999999997e-05 1804670000.0 14470.0 14264.2 13001.3 13839.199999999999 14605.0 14444.5 15103.0 14099.3 15068.3 14143.3 15755.6 True False 15938.983747749005 15466.294194214257 13883.646401168087 14694.015952896372 13579.195184514734 14326.868781058707 15677.752929678718 13818.078400813118 14435.031752424758 13250.28962428932 13817.761082977382 1.1535142091423796 1.1193053709162597 1.0047681616287223 1.0634151122354027 0.9827348369225644 1.036844442093337 1.1346087716766742 1.0000229644899654 1.0446722638885264 0.9589317360981765 1.0 13.754236251704073 -5.651616823350456 4.617568791733351 1.028202349266967 1.145445559805494 0.48164835009718365 0.0448475025321324 0.11486295479881395 4.018349786174717 0.0054352543290999665 0.02288908953232431 2.2304021581786484e-06 5.651616823350456 0.11724321053852704 ASSVT(ph)TFTGEPNTCPR ddPTM_A549_MK2206_60min_R1 1 ASSVTTFTGEPNTCPR 16 0 H0YFA4;P52943;P52943-2 H0YFA4 CRIP2 Cysteine-rich protein 2 1 AS(0.001)S(0.38)VT(0.617)T(0.002)FTGEPNTCPR 200.97 2.1965e-39 8660100.0 2004.1 2521.3 2122.1 1733.9 3185.5 2665.6 1765.7 2312.7 3074.4 2924.1 3001.3 True False 2342.343084459256 2649.623400656984 2423.0456897785507 2158.70557783773 2716.9171698063333 2947.6720227179235 2086.5048344089987 2640.5323073467057 2378.0533088079655 2263.5437791243507 2255.9943783339313 1.0382752310708743 1.1744813843967778 1.0740477516473192 0.9568754242339691 1.204310257108352 1.306595464521858 0.9248714688508657 1.1704516344126525 1.0541042706694046 1.0033463739373298 1.0 11.139547757381123 -9.328837455799269 0.8926719927137076 1.0102067244014985 1.1086246030356026 0.12122241089802677 0.10491695868447395 0.7408304160638255 1.2559742046256022 0.029222671858644893 0.022335705756412007 4.689888786384232e-10 9.328837455799269 0.09841787863410412 AST(ph)IFLSK ddPTM_A549_MK2206_60min_R1 1 ASTIFLSK 8 0 Q8N7R7-3;Q8N7R7;Q8N7R7-2;H7BZD2;A0A494C0K2;Q8ND76;Q8ND76-3;R4GNF3;R4GN48 Q8N7R7-3;Q8ND76 CCNYL1;CCNY Cyclin-Y-like protein 1;Cyclin-Y 1 AS(0.207)T(0.781)IFLS(0.012)K 119.68 0.0012898 17429000.0 2197.7 2166.7 2383.9 1730.7 2661.2 2166.2 2063.8 2254.3 3442.3 3084.4 2554.5 True False 2568.6180313936948 2276.975775276043 2721.9728664356503 2154.7215776940766 2269.741005270323 2395.4258461928157 2438.765745740098 2573.853928504208 2662.624546223543 2387.6318977911665 1920.1471493866097 1.3377193681298014 1.1858340002761882 1.4175855570783642 1.1221648186611124 1.182066179665132 1.2475220177568336 1.270093152245733 1.340446188890484 1.3866773424495706 1.2434629807168136 1.0 10.907001159960444 -10.92253107981 1.1782265717419473 1.000017243342777 1.2812832881617502 0.10406042265778825 0.11076881180932027 0.2791162957673273 0.6884717956131167 0.06344871390054559 0.014990684107569194 1.1952779838501889e-11 10.92253107981 0.2812660448189732 AST(ph)PDWVSEGPQPGLR ddPTM_A549_MK2206_60min_R1 2 ASTPDWVSEGPQPGLR 16 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AS(0.009)T(0.991)PDWVSEGPQPGLR;AS(0.006)T(0.994)PDWVSEGPQPGLR 227.34 6.1482999999999995e-55 145265000.0 12164.900000000001 11372.5 9608.6 9643.2 16561.8 13597.0 15344.7 13755.2 20274.5 20942.2 21970.0 True False 14218.037716749863 11951.311674125076 10971.243963435365 12005.784432899696 14125.581159283798 15035.825515041866 18132.63336498598 15705.041723533286 15682.358121723608 16211.342475010433 16514.242658846673 0.8609560856327411 0.7236972303857218 0.664350414976982 0.7269957624407439 0.8553574905668914 0.910476237127785 1.097999692724167 0.9509998156118955 0.9496262375267069 0.9816582455463693 1.0 14.011423188871385 -7.106463835789616 2.1355077608388604 0.981239322076225 0.7376640092614882 0.7719069613298963 0.06079252938181562 0.11049793934492301 0.9889844912706469 0.009196989603174912 0.01782403972617411 7.825933698202949e-08 7.106463835789616 -0.24357531281473677 AST(ph)PDWVSEGPQPGLR ddPTM_A549_PD325901_60min_R1 3 ASTPDWVSEGPQPGLR 16 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AS(0.001)T(0.999)PDWVSEGPQPGLR;AS(0.423)T(0.576)PDWVS(0.001)EGPQPGLR;AS(0.006)T(0.994)PDWVSEGPQPGLR 286.28 1.6305999999999994e-107 294624200.0 30201.82 28670.120000000003 25380.629999999997 22451.54 25187.92 25766.629999999997 23498.98 19660.3 30895.870000000003 28187.68 33630.88 True False 33267.88653299521 31086.251630194893 27103.112177926738 23838.320634653108 23418.80739280674 25556.79510817895 24393.246543035264 19268.15989329303 29597.424027182064 26407.90507426044 29494.494963713383 1.1279354528336278 1.0539679241309208 0.9189210464960079 0.8082294904178228 0.7940060483021842 0.8664937351740071 0.8270440491707315 0.6532798719557106 1.0034897720267906 0.8953503054298666 1.0 14.848158085560032 AST(ph)PVLK ddPTM_A549_MK2206_60min_R1 2 ASTPVLK 7 0 A0A669KBK8;Q04724;A0A669KAE5;F6T2C8 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 AS(0.011)T(0.989)PVLK;AS(0.08)T(0.92)PVLK 126.62 0.0062058999999999994 48406000.0 11633.400000000001 13121.5 12358.7 11134.7 17107.199999999997 12167.8 11431.900000000001 11876.1 17275.7 17064.300000000003 18273.9 True False 13596.833510677265 13789.328303542072 14111.349496379149 13862.701999855683 14590.7535417708 13455.388519668055 13508.928253089562 13559.573544030884 13362.781533624051 13209.462778328945 13735.986296017207 0.9898694726144063 1.003883376582891 1.0273269929273867 1.0092250895645707 1.0622283123565315 0.979572069285588 0.9834698406044944 0.9871568922548012 0.9728301445305484 0.9616683137023129 1.0 13.74567288466915 AST(ph)PVLK ddPTM_A549_PD325901_60min_R1 2 ASTPVLK 7 0 A0A669KBK8;Q04724;A0A669KAE5;F6T2C8 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 AS(0.01)T(0.99)PVLK;AS(0.079)T(0.921)PVLK 110.38 0.0089142 79366000.0 16362.7 15899.0 16480.4 16177.699999999999 18472.800000000003 17390.0 16049.8 16717.4 16185.0 14797.8 17127.4 True False 18023.829258416914 17238.864527545342 17598.859048695944 17176.959786777537 17175.334255700367 17248.381605636136 16660.583921787555 16383.958342453414 15504.800734853621 13863.464382591656 15020.838379534063 1.1999216557029488 1.147663272313305 1.1716296124106123 1.1435420149504567 1.1434337965517165 1.1482968639844435 1.109164715099235 1.09074859395176 1.0322193970197402 0.9229487750484465 1.0 13.874677717850439 -8.391681503758184 0.7092320967530596 1.0056151759658767 1.1671034823995952 0.8648356043695222 0.029245127892708677 0.08345914061267888 0.08601900736673242 0.0035835938477807062 0.004534265507795761 4.058060301659835e-09 8.391681503758184 0.16148830643371848 AST(ph)PYIEK ddPTM_A549_MK2206_60min_R1 2 ASTPYIEK 8 0 Q969Z0-2;Q969Z0;C9J618;C9J5A2;C9J347;C9J7P5;C9IZN7 Q969Z0-2 TBRG4 Protein TBRG4 1 AS(0.007)T(0.993)PYIEK;AS(0.071)T(0.929)PYIEK 152.37 0.00057826 30328000.0 13996.3 14049.5 13231.7 12070.5 17927.199999999997 13499.7 12833.8 12797.900000000001 19772.7 19252.4 20365.0 True False 16358.533263318734 14764.559539733591 15108.154023581774 15027.77304186533 15290.132628018233 14928.229293624378 15165.535336602026 14612.041516924994 15294.215020513684 14903.269468627495 15307.808454593182 1.06863979333438 0.9645116466886162 0.9869573471863309 0.9817063681219617 0.9988453065226561 0.9752035595366423 0.9907058467308908 0.9545482333586804 0.999111993456162 0.9735730305768033 1.0 13.901980133451522 -8.9461931820487 24.999866893739565 0.9996085839992247 0.9879670358572566 0.0 0.028891691710136252 261.9582119462656 121711.61567674692 0.004400944557780826 0.004684887944544666 1.131896763064774e-09 8.9461931820487 -0.01164154814196805 AST(ph)PYIEK ddPTM_A549_PD325901_60min_R1 1 ASTPYIEK 8 0 Q969Z0-2;Q969Z0;C9J618;C9J5A2;C9J347;C9J7P5;C9IZN7 Q969Z0-2 TBRG4 Protein TBRG4 1 AS(0.003)T(0.997)PYIEK 89.88600000000001 0.0028074000000000003 19758000.0 4026.7 4531.0 4038.8 5333.1 4404.9 4092.4 4564.7 4350.8 5081.6 4481.7 4937.9 True False 4435.487619700131 4912.843271545884 4312.897255277369 5662.513474651111 4095.5150200800376 4059.072851230895 4738.412156399681 4264.019880863428 4868.038023740015 4198.724697148294 4330.569603927111 1.0242273015720327 1.1344566006030123 0.9959191630048585 1.3075678242225106 0.9457220168834333 0.937306918597957 1.0941775770334519 0.9846325705045051 1.1241103293491714 0.969554834851458 1.0 12.080341081141754 -11.169351683267616 1.5734201153775664 1.0000401311565494 1.069571156970131 0.06695911987010783 0.10140493823180018 0.9885981040073607 4.397632013128434 0.07048229794897984 0.01494698693159323 6.7709298875048965e-12 11.169351683267616 0.0695310258135815 AST(ph)SKSESSQK ddPTM_A549_PD325901_60min_R1 1 ASTSKSESSQK 11 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 AS(0.076)T(0.384)S(0.384)KS(0.155)ESSQK 54.09 0.007756999999999999 35020000.0 4879.7 3760.6 2915.8 3417.7 3963.8 3531.2 2291.4 2788.6 3408.9 3441.6 4660.9 True False 5375.083551754721 4077.518959826848 3113.68372212978 3628.8035668401317 3685.3963623676505 3502.44307796563 2378.6004809021915 2732.9791853856204 3265.635787769076 3224.2967886528686 4087.6388478794415 1.3149604825150274 0.9975242705069595 0.7617316103513099 0.8877505332259621 0.9015953951703772 0.8568377022306176 0.5819008404169919 0.6685960494781523 0.7989051648883319 0.7887919918183447 1.0 11.997052021204292 -5.343812205464132 2.878001884702482 0.8543421867223443 1.3556646019322087 0.601743485986431 0.11722683071753721 0.2184573859158717 2.7385463171085314 0.01930778932784368 0.2287834518061354 4.530934610067283e-06 5.343812205464132 0.5013224152098644 ASTAPGAEAS(ph)PSPCITER ddPTM_A549_MK2206_60min_R1 2 ASTAPGAEASPSPCITER 18 0 Q66PJ3 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 AST(0.001)APGAEAS(0.877)PS(0.055)PCIT(0.067)ER;ASTAPGAEAS(0.899)PS(0.101)PCITER 132.64 1.2828e-12 9206000.0 2271.6 2619.8 1715.51 1956.01 3168.3999999999996 2506.6 2190.3 2196.4 3260.8 3579.1 3931.7999999999997 True False 2654.990544712164 2753.136629929467 1958.7951139305428 2435.232537808625 2702.3325571541013 2771.8467482535807 2588.2491582975763 2507.7464261928944 2522.2340064276004 2770.578824207096 2955.4255478403866 0.8983445875170976 0.931553370356855 0.6627793805741072 0.8239871038497716 0.9143632662743856 0.9378841399943395 0.8757619220652957 0.8485229573877697 0.8534249858774715 0.9374551242651458 1.0 11.52915016178468 -11.136515318999727 0.46579577729161664 1.058864395096049 0.8540891164585627 0.2186832517740559 0.07408010770434986 2.2369581871681206 0.4967655465917252 0.22440655311498378 0.01858605306758291 7.30272053313537e-12 11.136515318999727 -0.20477527863748635 ASTAS(ph)PCNNNINAATAVALQEPR ddPTM_A549_MK2206_60min_R1 2 ASTASPCNNNINAATAVALQEPR 23 0 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 Q71RC2-6 LARP4 La-related protein 4 1 AS(0.048)T(0.043)AS(0.91)PCNNNINAATAVALQEPR;AS(0.015)T(0.057)AS(0.928)PCNNNINAATAVALQEPR 148.3 7.617599999999999e-28 50659000.0 4312.3 5375.6 4545.7 3924.3999999999996 5702.4 4145.3 4178.3 4575.2 7522.4 5675.6 6971.0 True False 5040.11081438733 5649.195078955966 5190.348613178628 4885.878176173012 4863.584513923601 4583.952894572561 4937.443025208767 5223.748610962362 5818.588410804396 4393.478018124607 5239.90831018753 0.9618700397081853 1.0781095287436027 0.9905418770567898 0.932435815083595 0.9281812249400865 0.8748154782900212 0.9422766073233181 0.9969160339707185 1.110437066139456 0.8384646749605756 1.0 12.355325851845597 -8.540990159502309 9.184020106887857 1.0522724936008887 0.9595429365173059 0.0 0.08314809438611892 0.20921379141924498 94.87598334946424 0.0107598531968469 0.012273681069096033 2.877463613245961e-09 8.540990159502309 -0.09272955708358277 ASTAS(ph)PCNNNINAATAVALQEPR ddPTM_A549_PD325901_60min_R1 2 ASTASPCNNNINAATAVALQEPR 23 0 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 Q71RC2-6 LARP4 La-related protein 4 1 AS(0.007)T(0.036)AS(0.956)PCNNNINAATAVALQEPR;AS(0.023)T(0.033)AS(0.944)PCNNNINAATAVALQEPR 146.53 9.991e-28 84021000.0 4285.9 4618.799999999999 4291.4 4372.2 4900.700000000001 4430.4 4090.8 4863.6 4424.3 4824.9 5236.6 True False 4721.001412887176 5008.042485680008 4582.640210284566 4642.260864013349 4556.491738497185 4394.320291294439 4246.477632571652 4766.5916825796085 4238.362056917695 4520.254990577416 4592.531397542424 1.0279736825345385 1.0904753941061642 0.9978462450440402 1.0108283345645794 0.9921525503201731 0.9568405550032706 0.9246485793965493 1.0379007283717925 0.9228814546996338 0.9842621855555119 1.0 12.165073869237451 -6.3178212425485425 1.1066717006441116 0.9657158458147943 1.0584911815376934 0.4028308776581714 0.036138612202073206 0.4164504013607045 0.8907617711358276 0.005978334041614555 0.028665196504141805 4.810373047027679e-07 6.3178212425485425 0.09277533572289909 ASTIFLSKS(ph)QTDVR ddPTM_A549_MK2206_60min_R1 1 ASTIFLSKSQTDVR 14 1 Q8N7R7-3;Q8N7R7;Q8N7R7-2;H7BZD2;A0A494C0K2;Q8ND76;Q8ND76-3;R4GNF3;R4GN48 Q8N7R7-3;Q8ND76 CCNYL1;CCNY Cyclin-Y-like protein 1;Cyclin-Y 1 ASTIFLS(0.025)KS(0.886)QT(0.089)DVR 60.949 0.0018884 19372000.0 4265.4 4449.4 4435.6 4305.6 6360.8 4936.0 4424.8 4876.1 6640.4 6439.6 5924.0 True False 4985.295240982243 4675.855455076029 5064.634777617334 5360.472193285729 5425.134746100811 5458.324243748376 5228.728884461084 5567.302107429968 5136.360002539818 4984.889887503565 4452.907305917506 1.1195596266639645 1.050067996893231 1.1373770953837055 1.2038140084708595 1.2183354319752633 1.2257888765155212 1.174228099810787 1.2502622949351614 1.1534845999857366 1.1194685954677526 1.0 12.120531864849593 -10.305864025414493 0.8440589585023565 1.0060864823531706 1.1711583322805657 0.25302140367723813 0.06300962154917936 0.3483642913892256 0.4746247265055833 0.03233620684198525 0.011680162270421348 4.9446547645974794e-11 10.305864025414493 0.1650718499273951 ASTKDSES(ph)PSQK ddPTM_A549_PD325901_60min_R1 2 ASTKDSESPSQK 12 1 E7ETY2;Q13428-6;Q13428-7;H0YA99;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 AS(0.002)T(0.002)KDS(0.025)ES(0.94)PS(0.031)QK;AS(0.005)T(0.005)KDS(0.068)ES(0.675)PS(0.247)QK 52.823 0.0066971999999999995 11870900.0 4215.3 4097.5 3330.7 2954.4 3878.6 3484.8999999999996 2410.1000000000004 3106.0 3320.3 4502.6 4594.5 True False 4643.234152860154 4442.810705177503 3556.7413311261575 3136.8865780707765 3606.180516443604 3456.5201298149127 2501.817674357326 3044.048393390138 3180.7593376542754 4218.305067581478 4029.4056269351595 1.1523372384804762 1.1025970370118303 0.8826962734529858 0.7784985847793017 0.8949658709804631 0.8578238206422534 0.6208900036356614 0.7554584162591487 0.7893867314802009 1.0468802245630453 1.0 11.976351328796389 -5.746415380313555 3.985706235951284 0.8572497608709292 1.140103058489813 0.4888846629076685 0.11078870273430513 0.1450653038714291 5.031840661268932 0.01665588081074773 0.06697690092663551 1.7930178771590044e-06 5.746415380313555 0.2828532976188839 ASTNS(ph)ETNRGESEK ddPTM_A549_MK2206_60min_R1 3 ASTNSETNRGESEK 14 1 J3KS94;J3QQK6;P02686-2;P02686;J3QKN5 J3KS94 MBP Myelin basic protein 1 AS(0.15)T(0.103)NS(0.67)ET(0.077)NRGESEK;AS(0.001)T(0.005)NS(0.978)ET(0.016)NRGESEK;AS(0.01)T(0.07)NS(0.883)ET(0.036)NRGES(0.001)EK 99.021 1.0181e-05 67299100.0 5492.49 5791.2300000000005 6122.420000000001 5044.96 5592.280000000001 3070.21 2587.15 3032.62 5041.99 7986.68 7920.25 True False 6419.488033512107 6085.978870656701 6990.671218139585 6280.9754264768635 4769.663020048524 3395.0975843595447 3057.2016663879735 3462.5031720092393 3899.9873154035467 6182.483441009839 5953.433337220312 1.0782833484298993 1.0222637133782495 1.1742251608722245 1.0550173438927735 0.8011617414490954 0.5702755690793933 0.5135190894428318 0.5815977060433333 0.6550820500535697 1.038473615276336 1.0 12.539506193425177 -6.761908477138384 4.591557990420089 0.7654541724792008 1.0885480399592367 0.5090089399930005 0.16215236372060923 0.16061452227113668 8.413103262674584 0.02793405087536884 0.056843807415949334 1.7301809377048376e-07 6.761908477138384 0.3230938674800359 ASTNS(ph)ETNRGESEK ddPTM_A549_PD325901_60min_R1 3 ASTNSETNRGESEK 14 1 J3KS94;J3QQK6;P02686-2;P02686;J3QKN5 J3KS94 MBP Myelin basic protein 1 AS(0.001)T(0.003)NS(0.995)ET(0.001)NRGESEK;AS(0.001)T(0.003)NS(0.995)ET(0.001)NRGESEK;ASTNS(0.998)ET(0.002)NRGESEK 149.09 6.9779e-14 81055300.0 6107.84 5966.51 6319.32 6180.41 6860.400000000001 7173.64 6771.320000000001 6556.69 7168.6 7269.65 6883.290000000001 True False 6727.903420445839 6469.328737168665 6748.187056358172 6562.159888970487 6378.549171095162 7115.22025425276 7029.006288008483 6425.911674326202 6867.328671478014 6810.643058353772 6036.688966770383 1.1145022474207835 1.0716683885454088 1.1178623072191245 1.0870462144219484 1.0566304154821602 1.1786627227970947 1.1643810583418195 1.0644761904577722 1.1375985592896998 1.1282083764533348 1.0 12.559541754579039 -10.835735633134401 0.965384859101747 0.9967441693315252 1.1112110468654006 0.0 0.05289401415953372 0.37005626361465604 0.5828397727587704 0.030522602633188626 0.006682964672863059 1.459702550536676e-11 10.835735633134401 0.11446687753387541 ASTNSETNRGES(ph)EKKR ddPTM_A549_MK2206_60min_R1 2 ASTNSETNRGESEKKR 16 3 J3KS94;J3QQK6;P02686-2;P02686;J3QKN5 J3KS94 MBP Myelin basic protein 1 ASTNSET(0.056)NRGES(0.944)EKKR;ASTNSET(0.204)NRGES(0.796)EKKR 121.26 1.5395e-08 22513000.0 2243.1000000000004 3119.5 2743.9 1472.6999999999998 1694.97 1159.5900000000001 1029.27 1232.37 1420.6399999999999 3041.8999999999996 2768.3 True False 2621.680441470264 3278.2692255382 3133.026279715078 1833.5115661120158 1445.6421583131826 1282.297044126455 1216.2750359133206 1407.0622214748396 1098.8673082959099 2354.7326773086984 2080.8547088067926 1.2599055716742438 1.5754435961644007 1.5056439387407416 0.8811338717460919 0.6947347896010219 0.616235741351568 0.5845074289741061 0.6761943616340613 0.5280845912235863 1.1316180160694416 1.0 11.022960520181481 -6.345286264633925 3.8539833329111723 0.7343257070685348 1.462681464491639 0.7337272860017965 0.18404521867284657 0.08986279216980991 2.5012922068657026 0.02765130452264527 0.06868147492768968 4.5155820226515174e-07 6.345286264633925 0.7283557574231042 ASTNSETNRGES(ph)EKKR ddPTM_A549_PD325901_60min_R1 3 ASTNSETNRGESEKKR 16 3 J3KS94;J3QQK6;P02686-2;P02686;J3QKN5 J3KS94 MBP Myelin basic protein 1 ASTNSET(0.001)NRGES(0.999)EKKR;ASTNSET(0.01)NRGES(0.989)EKKR;ASTNSETNRGES(1)EKKR 181.34 1.0512e-34 75159000.0 4422.65 4603.58 4535.6 3088.22 5655.7 5021.9400000000005 5056.52 5736.67 4267.41 5733.7 6203.9 True False 4871.634172217147 4991.539842865414 4843.413090778459 3278.972335543503 5258.4631431057815 4981.042985658898 5248.948635633914 5622.247616519447 4088.06559801802 5371.673203480635 5440.859629762333 0.8953794995130117 0.9174175006392243 0.890192620350698 0.6026570355917701 0.9664765314549167 0.9154882361625051 0.9647278174429209 1.0333381118242593 0.7513639160355612 0.9872839163313022 1.0 12.409618893052853 ASTRS(ph)PTQR ddPTM_A549_MK2206_60min_R1 2 ASTRSPTQR 9 1 A0A2R8Y575;Q5VVD7;Q8IWE5 A0A2R8Y575 PLEKHM2 Pleckstrin homology domain-containing family M member 2 1 AS(0.001)T(0.006)RS(0.987)PT(0.006)QR;AS(0.002)T(0.008)RS(0.964)PT(0.026)QR 92.943 0.00027622 60474000.0 3176.2 3279.9 2866.7 2255.2 2798.7 1722.18 2043.8 1883.25 2323.8 5181.0 4468.4 True False 3712.2649093655455 3446.8329004144075 3273.2411662448385 2807.724101239775 2387.014937415471 1904.4199445094366 2415.1320046242918 2150.2064547112395 1797.4630103460677 4010.608501639227 3358.772958433792 1.1052443720687175 1.026217890601834 0.9745348098107717 0.8359374497730345 0.7106806464610055 0.5669987129458951 0.7190518783235876 0.6401761837792955 0.5351546629052983 1.1940695460134312 1.0 11.71371856227913 -6.2255068318635045 1.8581566387699542 0.7401979032086181 1.0675641217857663 0.2956475710899812 0.18114131901523303 0.31432192238768236 2.057052310860993 0.0262725659329391 0.09252914937213307 5.949673972847329e-07 6.2255068318635045 0.3273662185771482 ASTRS(ph)PTQR ddPTM_A549_PD325901_60min_R1 2 ASTRSPTQR 9 1 A0A2R8Y575;Q5VVD7;Q8IWE5 A0A2R8Y575 PLEKHM2 Pleckstrin homology domain-containing family M member 2 1 AS(0.033)T(0.18)RS(0.719)PT(0.068)QR;AS(0.001)T(0.009)RS(0.922)PT(0.068)QR 93.839 0.00026912 61233000.0 6318.2 6346.3 6254.9 6368.6 6497.9 6051.5 5725.2 5864.6 6315.200000000001 7724.1 8127.900000000001 True False 6959.619012786993 6881.124973341789 6679.395127769242 6761.973957859988 6041.50992053805 6002.2185903684285 5943.07561894965 5747.6259523103045 6049.794105699575 7236.3990077968465 7128.219827003218 0.9763474165628944 0.9653356855346434 0.937035513757063 0.948620289773358 0.8475482051846271 0.8420361234695294 0.8337391050197429 0.8063199637218077 0.8487103726489557 1.0151761847163892 1.0 12.799326113446327 -6.556857194733367 22.34775325679905 0.8989625477738769 0.9572623094044229 0.20596770535766284 0.0645253998766096 101.95547867601697 67055.92492878798 0.011073052829023369 0.023050663171926236 2.774232181260251e-07 6.556857194733367 0.058299761630546065 ASTS(ph)KSESS(ph)QK ddPTM_A549_MK2206_60min_R1 1 ASTSKSESSQK 11 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 AS(0.038)T(0.286)S(0.338)KS(0.338)ES(0.142)S(0.858)QK 54.7 0.05820499999999999 3497800.0 1718.2 895.03 710.43 522.26 167.03 138.25 151.87 231.14 345.67 1307.7 1188.3 True False 2008.190154043158 940.5832040177769 811.1796566558486 650.2137234451419 142.46010826330306 152.8795232370772 179.46281316287858 263.9048028365623 267.3762969215617 1012.2896617629067 893.2123145884156 2.24827862451551 1.053034299522829 0.9081599563812923 0.7279497974059558 0.15949187660824787 0.17115698108967828 0.20091842693142165 0.2954558491036561 0.2993423764480524 1.1333135977075741 1.0 9.802859331299159 -4.823264918257902 1.0725202019534605 0.5371995294504175 4.8756733021300835 0.7095753717579767 0.32360332577635087 1.8017851041382333 0.865628520459732 0.053957612462592196 11.13621231483709 1.502225333853206e-05 4.823264918257902 4.3384737726796665 ASTSDYQVISDRQT(ph)PK ddPTM_A549_PD325901_60min_R1 3 ASTSDYQVISDRQTPK 16 1 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 ASTSDYQVIS(0.025)DRQT(0.974)PK;ASTSDYQVIS(0.006)DRQT(0.994)PK;ASTSDYQVISDRQT(1)PK 108.18 2.6070999999999996e-07 118322000.0 55884.5 55890.5 60125.5 57948.8 66180.3 58909.5 59418.8 60720.8 64654.9 63280.4 67780.0 True False 61557.85330000549 60600.58858272683 64205.97799400302 61528.16576472641 61532.0240376406 58429.76056338246 61680.01494921499 59509.67600945391 61937.67939647121 59284.86474449939 59443.48969282076 1.0355693048660313 1.0194655276109372 1.0801179124205664 1.035069880363323 1.0351347869314624 0.9829463388728213 1.0376243936544045 1.0011134325554434 1.0419590053770293 0.997331500066011 1.0 15.85923119284763 -7.0155322533785816 24.236433136959977 1.0175426708192057 1.0425285069518524 0.3074833941428292 0.021807883866052407 572.9848714454062 894085.2622814847 0.0033054214349051763 0.005842595353977428 9.648676521401218e-08 7.0155322533785816 0.02498583613264671 ASTSDYQVISDRQT(ph)PKKDESLVSK ddPTM_A549_MK2206_60min_R1 1 ASTSDYQVISDRQTPKKDESLVSK 24 3 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 ASTSDYQVIS(0.086)DRQT(0.913)PKKDES(0.001)LVSK 86.869 8.9193e-08 14574000.0 2063.3 2576.6 2550.6 2236.5 3022.5 1891.9 1824.1 1757.7 3646.8 3468.4 3671.5 True False 2411.534597158218 2707.737934451588 2912.3134330847624 2784.442600400301 2577.894253881538 2092.0996022584186 2155.5153584671552 2006.8593577304907 2820.805622742936 2684.8860310915825 2759.7652217549175 0.873818750286569 0.9811479299422993 1.0552757930737457 1.0089418398532073 0.9340991159538822 0.7580715873099036 0.7810502652455619 0.7271848133713132 1.0221179687702577 0.9728675504448455 1.0 11.430329824195617 ASTSDYQVISDRQT(ph)PKKDESLVSK ddPTM_A549_PD325901_60min_R1 2 ASTSDYQVISDRQTPKKDESLVSK 24 3 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 ASTSDYQVIS(0.1)DRQT(0.848)PKKDES(0.051)LVS(0.001)K;ASTSDYQVIS(0.017)DRQT(0.953)PKKDES(0.03)LVSK 120.93 1.275e-16 34030000.0 5352.6 5318.7 5546.299999999999 4713.7 6437.3 6097.4 6537.7 6649.200000000001 6197.799999999999 6192.4 7099.8 True False 5895.992011624142 5766.925514979273 5922.705270611289 5004.854543410582 5985.166255479407 6047.74479598653 6786.495751066715 6516.576489803507 5937.328019430071 5801.410807198403 6226.5696093403485 0.9469085518259823 0.926180204639233 0.951198756651939 0.8037900252336219 0.9612301204344014 0.9712803638964276 1.0899253002626732 1.0465757067949781 0.9535472004558672 0.9317186141299739 1.0 12.604221845886359 -6.989942360805122 24.98246152872366 0.9911241090731504 0.9079144789010972 0.37717430150680265 0.054622466769234455 187.8145737290695 466514.55388262117 0.00786382439927686 0.01484961071543858 1.023428811870541e-07 6.989942360805122 -0.08320963017205318 ASTSKS(ph)ES(ph)SQK ddPTM_A549_PD325901_60min_R1 1 ASTSKSESSQK 11 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 AS(0.002)T(0.006)S(0.055)KS(0.936)ES(0.644)S(0.357)QK 67.153 0.015068000000000002 7023000.0 1450.2 1205.2 973.11 923.92 920.9 821.75 380.92 581.04 749.21 942.32 852.37 True False 1597.423236419185 1306.7664336497676 1039.151096385798 980.9884400254367 856.2191609325314 815.0579404503445 395.416119047422 569.450701382938 717.723309147957 882.8217543826631 747.5338936186145 2.1369241582966634 1.7481032563273564 1.390105659765528 1.3122996139703182 1.1453917584763953 1.0903290772607834 0.5289607901700842 0.7617724176042069 0.9601214276367427 1.1809788986411784 1.0 9.545995183195087 -5.549307300741963 0.7168336070280468 0.9353384309670313 2.575560285270686 0.8384621850886478 0.17060407296421806 0.5592713948587338 0.2524137876597886 0.027581687816726777 0.6791494843104185 2.8228818361010776e-06 5.549307300741963 1.6402218543036549 up ASTSKS(ph)ESS(ph)QK ddPTM_A549_PD325901_60min_R1 2 ASTSKSESSQK 11 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 AS(0.002)T(0.017)S(0.14)KS(0.84)ES(0.239)S(0.762)QK;AS(0.043)T(0.07)S(0.07)KS(0.818)ES(0.1)S(0.901)QK 71.548 0.0011801 16731200.0 7228.3 6751.8 5176.2 5015.8 6570.400000000001 5224.5 3973.4300000000003 4636.2 4509.599999999999 6272.6 5630.9 True False 7962.111694806788 7320.797881444162 5527.488059019192 5325.614574291699 6108.917770649475 5181.953404177452 4124.641052994327 4543.7273539714615 4320.077194556432 5876.546965511385 4938.334997216061 1.612306921117209 1.4824425409720465 1.1193019635434331 1.078423107645383 1.237039968753298 1.0493320941367341 0.8352290914487481 0.920092978004316 0.8748044020893345 1.1899854847482465 1.0 12.269808991217591 -4.727234032150733 0.5043012268803427 0.9339057706928113 2.5999758233137205 0.7357361258197481 0.11946433234514202 1.8005361650679013 0.20796534420527385 0.018942560771185217 1.9982926692193728 1.873984385202897e-05 4.727234032150733 1.6660700526209091 ASTSKS(ph)ESSQK ddPTM_A549_PD325901_60min_R1 1 ASTSKSESSQK 11 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 AS(0.002)T(0.01)S(0.038)KS(0.947)ES(0.002)S(0.001)QK 54.898 0.005036199999999999 33411000.0 6340.7 5591.3 3986.5 4337.2 5529.8 3917.6 3246.0 4414.0 4292.8 4519.6 6193.8 True False 6984.403196223365 6062.498473669053 4257.047862771923 4605.09899350412 5141.405924774364 3885.696364476142 3369.5283062793565 4325.959307283987 4112.388544614122 4234.231684680237 5432.001865733156 1.28578807019255 1.1160707642449972 0.78369779097956 0.8477719830242678 0.9465029747519114 0.7153341365709731 0.620310594430286 0.7963839877474184 0.7570668505392854 0.7794974650857827 1.0 12.407268259768205 -5.595224247949055 3.61743532805903 0.844852951575197 1.25972859021594 0.6746550356982808 0.10548315003658179 0.12409640369004891 3.104156925877604 0.017981529179008093 0.08937669417660381 2.539661013007208e-06 5.595224247949055 0.41487563864074306 ASTSSSSSSSSNQQT(ph)EKETNTPKKK ddPTM_A549_PD325901_60min_R1 1 ASTSSSSSSSSNQQTEKETNTPKKK 25 3 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSS(0.006)S(0.006)S(0.006)NQQT(0.327)EKET(0.327)NT(0.327)PKKK 78.65 1.0786e-06 11019000.0 174.84 385.47 522.13 554.08 337.88 757.0 477.92 535.19 314.98 490.9 464.93 True False 192.5896280895948 417.9549097070829 557.5648816227522 588.3042631930193 314.1484744227208 750.8352429825505 496.10750712785887 524.5152156015669 301.7424859724556 459.9044902224821 407.7465574340981 0.4723268034475608 1.0250360232032976 1.3674300161635782 1.4428184676656743 0.7704503415053233 1.8414263205739119 1.2167055688950654 1.2863755831619532 0.7400246071267557 1.1279175307244966 1.0 8.671528886224525 -8.756134329971552 24.996777787646554 0.8772338390080608 1.1977191496249346 0.05976343130823858 0.34990483731804617 178.98892526493552 843374.246915682 0.05732721544755551 0.06407389328095618 1.7533380996344603e-09 8.756134329971552 0.3204853106168738 ASTSSSSSSSSNQQTEKET(ph)NTPKKK ddPTM_A549_MK2206_60min_R1 1 ASTSSSSSSSSNQQTEKETNTPKKK 25 3 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSS(0.001)S(0.001)S(0.005)S(0.019)S(0.079)S(0.079)NQQT(0.079)EKET(0.369)NT(0.369)PKKK 44.258 0.009853200000000001 6075300.0 205.14 181.6 323.29 197.7 230.22 210.48 271.96 0.0 271.64 405.52 339.27 True False 239.76261680852826 190.8426643236855 369.1373832752972 246.13650887509027 196.35494297058995 232.75285389468368 321.37161169274026 0.0 210.1139737199438 313.9127503541283 255.01989562434736 0.9401722019434375 0.7483442178362546 1.4474846457432822 0.96516590704616 0.7699593103897556 0.9126850802163932 1.260182508137056 0.0 0.8239120842142001 1.2309343535162138 1.0 7.994465994501578 -6.526950394434862 23.775406883350943 0.8623498119706747 1.0474164353935105 0.05461349828871853 0.34775479655674646 149.12536178406768 870782.2029746233 0.046114018053353564 0.09637675776986489 2.972005477892877e-07 6.526950394434862 0.18506662342283575 ASTSSSSSSSSNQQTEKET(ph)NTPKKK ddPTM_A549_PD325901_60min_R1 1 ASTSSSSSSSSNQQTEKETNTPKKK 25 3 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSS(0.002)S(0.005)S(0.045)NQQT(0.134)EKET(0.407)NT(0.407)PKKK 70.17399999999999 2.4354e-05 10103000.0 216.91 220.12 675.91 854.96 306.71 968.98 596.89 794.33 715.19 442.94 580.58 True False 238.9305435192977 238.67028491120712 721.7813171770147 907.7689374449603 285.16774769205836 961.088948144295 619.6049755807405 778.4864650101695 685.1330514402196 414.97269280738647 509.17234059985066 0.46925279412824367 0.4687416536217033 1.4175579850364448 1.782832383187836 0.5600613484937245 1.887551368191065 1.2168865552492312 1.5289252831232794 1.3455818331236755 0.8149945700477591 1.0 8.992010240665115 -5.754220183485541 24.95494708889882 1.2563029156470278 0.4689967549883461 0.41359002050587335 0.37304097930066327 108.2321746359641 374121.1975258121 0.04608534354420348 0.17131257437728534 1.7610829664521483e-06 5.754220183485541 -0.7873061606586818 ASTSSSSSSSSNQQTEKETNT(ph)PK ddPTM_A549_MK2206_60min_R1 2 ASTSSSSSSSSNQQTEKETNTPK 23 1 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSSSSNQQTEKET(0.008)NT(0.992)PK;ASTSSSSSSSSNQQTEKET(0.003)NT(0.997)PK 191.18 1.5571999999999998e-50 132273000.0 4480.8 3369.8999999999996 3678.3 3083.0 4814.3 3662.1000000000004 3713.8 3539.7 5586.3 5002.700000000001 4825.5 True False 5237.049494957855 3541.4135159933253 4199.938250182579 3838.3351384011276 4106.122847464648 4049.620991294761 4388.549387794156 4041.4633148766093 4321.011969488007 3872.5865954739543 3627.195172975176 1.4438289767192787 0.9763504159850629 1.157902470061355 1.0582102576114663 1.1320380215704344 1.1164607356855005 1.2099016398377278 1.1142117041255415 1.1912819033511597 1.0676532170992878 1.0 11.82463866093464 -10.864914870215323 1.0360617119506144 0.9973191369043161 1.1491628877202438 0.14001599360677552 0.11158497149273353 0.6605654130446466 1.2217997431908725 0.0752806048125087 0.016984311567496406 1.3648506464459212e-11 10.864914870215323 0.1518437508159277 ASTSSSSSSSSNQQTEKETNT(ph)PK ddPTM_A549_PD325901_60min_R1 2 ASTSSSSSSSSNQQTEKETNTPK 23 1 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSSSSNQQTEKET(0.023)NT(0.977)PK;ASTSSSSSSSSNQQTEKET(0.023)NT(0.977)PK 262.53 4.958399999999999e-124 287580000.0 13533.3 11825.099999999999 12604.900000000001 11918.8 16384.2 12717.4 14284.400000000001 13983.3 13892.699999999999 14339.6 12967.199999999999 True False 14907.190653311109 12821.642677192058 13460.344313421247 12654.99720644122 15233.430314421512 12613.833710840529 14828.000658723615 13704.39211181337 13308.838132165643 13434.195208788555 11372.31660585343 1.3108314840301094 1.127443345236506 1.183606188601282 1.1127897371347877 1.3395186611829584 1.1091701144117003 1.3038680835786365 1.2050660025380933 1.1702838210919548 1.1813068237894342 1.0 13.4732385489375 -10.215197398123578 0.6566907233565 0.9975125179528429 1.2085092381763216 0.09363383209188358 0.09211045251864444 0.45079152207457623 0.3618025309872366 0.048468396875580855 0.015390140974591782 6.09259909840347e-11 10.215197398123578 0.2109967202234787 ASTTLDIKDSISAVSSEKVS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 ASTTLDIKDSISAVSSEKVSPSK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASTTLDIKDS(0.022)IS(0.137)AVS(0.106)S(0.106)EKVS(0.314)PS(0.314)K 56.854 0.00077697 25120000.0 2356.1 2584.6 2412.7 1970.4 3533.8 2155.5 2200.4 1940.8 4106.1 3993.7 2898.1 True False 2753.7520788855118 2716.145100280825 2754.857139498004 2453.1480884546186 3013.9827011965544 2383.5935792948994 2600.1841975610578 2215.9143434507237 3176.0749060943217 3091.52039625489 2178.421786509037 1.264104176674827 1.2468407711958758 1.2646114524555485 1.1261125387411022 1.3835625037640302 1.094183685664774 1.1936091594676455 1.017210880452022 1.4579705940161585 1.4191560217588126 1.0 11.089067600696358 -11.17413057995058 1.5854698831574836 1.0002127086988153 1.2551833141848776 0.0 0.17233368095426818 0.36833485998877324 1.6650329253116405 0.09683838651222769 0.020521229837973682 6.696832245181168e-12 11.17413057995058 0.2549706054860623 ASTTLDIKDSISAVSSEKVS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 ASTTLDIKDSISAVSSEKVSPSK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASTTLDIKDSISAVS(0.001)S(0.002)EKVS(0.99)PS(0.007)K 108.1 4.3968e-11 41260000.0 4727.3 4008.1 4679.0 5321.3 5010.6 5314.2 4770.5 4889.6 4463.2 3915.3 5312.1 True False 5207.212015945674 4345.876653428174 4996.545077112708 5649.9846154508605 4658.672741631599 5270.922917117393 4952.043988017766 4792.0730921830045 4275.627225196088 3668.08728981072 4658.745376176355 1.117728400134087 0.9328427081788774 1.0725087279214216 1.2127695676057875 0.9999844089902127 1.1314039492416903 1.0629565662337475 1.0286188029696692 0.9177636638096951 0.7873551769041489 1.0 12.185725766736255 -8.53280464903165 3.9822592404197246 0.961230463207504 1.0736198225192242 0.38635524601183013 0.08729333305278508 0.18415940146538662 6.661687717379222 0.01204152400850952 0.014034631749599043 2.9322118934196967e-09 8.53280464903165 0.11238935931172012 ASTTSLS(ph)GSDSETEGK ddPTM_A549_MK2206_60min_R1 1 ASTTSLSGSDSETEGK 16 0 Q5T7F5;Q8N1G2 Q5T7F5 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 1 ASTTSLS(0.919)GS(0.08)DS(0.001)ETEGK 122.34 7.1964e-08 2551700.0 944.45 889.86 950.99 641.24 1073.4 880.14 598.73 953.73 1493.5 1063.0 1279.5 True False 1103.850070414422 935.1500731006321 1085.8546819294595 798.3438287863577 915.5042819243821 973.2758306103514 707.5114909133489 1088.9241481756283 1155.2246346294228 822.8675617144376 961.7648375964641 1.1477338609852294 0.9723271599715116 1.1290230620648463 0.8300821547827533 0.951900346255441 1.0119686149502558 0.7356387583075745 1.1322145555840308 1.2011508317526267 0.8555808338458878 1.0 9.909540371600192 ASTVS(ph)PGGYMVPK ddPTM_A549_MK2206_60min_R1 2 ASTVSPGGYMVPK 13 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 AS(0.001)T(0.01)VS(0.801)PGGY(0.188)MVPK;AS(0.002)T(0.097)VS(0.901)PGGYMVPK 103.88 0.00011849 5873200.0 4075.3999999999996 4447.7 4458.4 3782.3999999999996 5859.7 4736.700000000001 4377.0 4653.4 6751.1 6241.0 7350.0 True False 4763.227886036249 4674.0689323373135 5090.668160458363 4709.088169798388 4997.745892297651 5237.934450033013 5172.244243194307 5313.033700439819 5221.98662929139 4831.153765437256 5524.792150319661 0.862155128453231 0.8460171541597044 0.9214225661256451 0.852355716137832 0.9046034233176509 0.9480781009526211 0.9361880234526188 0.9616712368323955 0.9451915089673101 0.8744498677941628 1.0 12.431704474171834 -2.000000411337716 0.1092671458749108 1.0379730704392964 0.4559360058522901 0.2177881097709382 0.04225771730688646 27.07641595807049 0.19990938543008216 0.10344664387251133 2.3877922136117973 0.009999990528603557 2.000000411337716 -0.5820370645870063 ASTVS(ph)PGGYMVPK ddPTM_A549_PD325901_60min_R1 3 ASTVSPGGYMVPK 13 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 AS(0.011)T(0.015)VS(0.965)PGGY(0.01)MVPK;AS(0.033)T(0.081)VS(0.875)PGGY(0.012)MVPK;AS(0.157)T(0.2)VS(0.571)PGGY(0.073)MVPK 59.57 0.0032263000000000005 19525900.0 12013.5 11944.3 10946.2 10964.099999999999 12203.400000000001 12197.400000000001 12168.2 12382.3 12437.099999999999 12324.1 15608.599999999999 True False 13233.101676128723 12950.888079524488 11689.074956847857 11641.327555722242 11346.27528344451 12098.068418435078 12631.267509694539 12135.325312773572 11914.411938180283 11545.954222755936 13688.841151067605 0.9667072274482973 0.9460909025534595 0.8539126744075203 0.8504246215768473 0.8288704031428988 0.8837905477113042 0.9227419158640331 0.886512245912586 0.8703740372683825 0.8434573895143386 1.0 13.740712697849204 -10.770850542276312 0.8491251252439747 1.005537159846964 0.8871558932039897 0.0 0.060699089279489464 0.4706286405726535 0.5558696171207361 0.037044483257632675 0.007805281921831975 1.69492098872133e-11 10.770850542276312 -0.11838126664297433 ASVALT(ph)PTAPSR ddPTM_A549_MK2206_60min_R1 2 ASVALTPTAPSR 12 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 ASVALT(0.499)PT(0.499)APS(0.001)R;ASVALT(0.564)PT(0.436)APSR 128.68 9.0237e-08 12193200.0 2396.3999999999996 3222.2 2953.7 2302.8 3414.4 3579.2 2562.88 2471.55 4929.1 4304.3 3962.6000000000004 True False 2800.853733645107 3386.1962168710343 3372.5790744540373 2866.9861033766188 2912.1462830283317 3957.948568319325 3028.522121543941 2821.8997813044293 3812.6667201552646 3331.9556405338203 2978.5770578036318 0.9403328096908206 1.1368502983662865 1.1322786045162578 0.9625354817883077 0.9776971441442964 1.3288051614947545 1.0167680952250193 0.9473986156951284 1.2800295732374576 1.1186400673450314 1.0 11.540407567723125 ASVALTPTAPS(ph)R ddPTM_A549_MK2206_60min_R1 1 ASVALTPTAPSR 12 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 ASVALTPT(0.003)APS(0.997)R 89.62899999999999 0.00027459 6012500.0 3266.7 3333.2 2989.9 2411.0 4219.8 3513.4 2876.1 2815.1 5066.8 4292.4 5038.2 True False 3818.0390968529755 3502.845642751699 3413.912778789357 3001.695108233904 3599.0730099352577 3885.1856559938306 3398.6501411585905 3214.149045882181 3919.177890016976 3322.74385879873 3787.075892753811 1.00817601890641 0.9249473055066159 0.9014640518088207 0.7926155147768087 0.9503567163313844 1.0259064687422141 0.8974338612177184 0.8487152454568265 1.0348823210847 0.8773903541665131 1.0 11.88686861768861 -8.781343319006286 24.99808892761752 1.0164722180226053 0.9180523081900619 0.0 0.07510131024079737 201.81842427824506 253470.09642733616 0.0110882610570908 0.011811879383966283 1.65446155939674e-09 8.781343319006286 -0.09841990983254345 ASVAT(ph)LMK ddPTM_A549_MK2206_60min_R1 3 ASVATLMK 8 0 E9PDF6;O43795-2;O43795 E9PDF6 MYO1B Unconventional myosin-Ib 1 ASVAT(1)LMK;AS(0.011)VAT(0.989)LMK;ASVAT(1)LMK 101.11 0.0024603000000000003 10169400.0 4596.1 4802.0 4420.31 3814.4 6709.700000000001 4544.28 4425.0 4622.97 7564.799999999999 7073.6 7038.8 True False 5371.809316143497 5046.401288999659 5047.176425703327 4748.92817123492 5722.712018285847 5025.152693351071 5228.965221872242 5278.290154751853 5851.3848785032815 5475.668847171442 5290.871699002728 1.015297595886898 0.9537939258574067 0.9539404303934766 0.8975700870104338 1.0816198811557869 0.9497778398781166 0.9882993803946986 0.9976220280954372 1.105939665784412 1.0349275428855225 1.0 12.369289718197026 -8.54112308438639 21.729883321036493 1.050119426717714 0.9765543060631021 0.2775698519219236 0.0491022328627516 51.366890547634995 61179.56374015738 0.009267843966290941 0.010510828953937502 2.876583040258835e-09 8.54112308438639 -0.07356512065461196 ASVAT(ph)LMK ddPTM_A549_PD325901_60min_R1 4 ASVATLMK 8 0 E9PDF6;O43795-2;O43795 E9PDF6 MYO1B Unconventional myosin-Ib 1 ASVAT(1)LMK;ASVAT(1)LMK;ASVAT(1)LMK;ASVAT(1)LMK 91.584 0.0016519000000000002 19666500.0 7875.700000000001 8005.4 8604.099999999999 8471.0 9982.900000000001 9754.0 9512.0 8868.7 9678.4 8982.599999999999 10289.2 True False 8675.235266216096 8680.04315295374 9188.02596665643 8994.234430963148 9281.735543135374 9674.566657928395 9873.984365166127 8691.806821139444 9271.650505542613 8415.437103019887 9023.693628612747 0.9613840654682974 0.9619168724246859 1.0182112053896213 0.9967353504161324 1.0285960411714794 1.0721293359574875 1.0942286796902365 0.9632205146658634 1.0274784237070762 0.9325933979336164 1.0 13.13950237101755 -5.763112896318148 7.031226429875604 1.0195239621448617 0.9612675108702514 0.1802055175730939 0.04276944565755618 0.11634044098093392 31.311909381649407 0.004788275764978623 0.016718811001783993 1.7253893129055422e-06 5.763112896318148 -0.05825645127461032 ASVDS(ph)DSEGPK ddPTM_A549_MK2206_60min_R1 1 ASVDSDSEGPK 11 0 Q9HCI5 Q9HCI5 MAGEE1 Melanoma-associated antigen E1 1 AS(0.028)VDS(0.808)DS(0.164)EGPK 66.498 0.0051186999999999995 4122800.0 3640.1 3034.6 2771.7 2535.4 3952.1 2924.4 2773.5 2771.1 3684.2 4332.6 5887.5 True False 4254.4598880994645 3189.048178175419 3164.7687377405464 3156.573113818432 3370.751325315214 3233.8580669403864 3277.4090492345003 3163.911911137832 2849.7345824584654 3353.862650878617 4425.4712632662595 0.9613574769796204 0.7206121085106115 0.7151258136076473 0.7132738924370948 0.7616705938854974 0.7307375586828707 0.7405785405135765 0.7149322010968562 0.6439392356047506 0.7578543507258633 1.0 12.111615378948253 -10.897614184728585 1.1274492575742925 1.001224191779462 0.733807905278353 0.04003121896987316 0.10221725540551752 0.25669667994625345 0.5751467349369117 0.05396956843025013 0.012652176904104237 1.2658604036690249e-11 10.897614184728585 -0.26741628650110894 ASVDS(ph)DSEGPK ddPTM_A549_PD325901_60min_R1 1 ASVDSDSEGPK 11 0 Q9HCI5 Q9HCI5 MAGEE1 Melanoma-associated antigen E1 1 AS(0.02)VDS(0.975)DS(0.005)EGPK 49.356 0.028541000000000004 12864000.0 5186.9 4177.2 4468.0 4949.2 3764.2 5154.9 4536.2 4453.5 4915.9 4800.7 6606.4 True False 5713.470269606036 4529.227303884673 4771.225348266634 5254.900843551271 3499.8155777850293 5112.920203501646 4708.827573303885 4364.671448796838 4709.301818502744 4497.582982707411 5793.8546814200545 0.9861259185405877 0.7817295311891693 0.8234975867736507 0.9069783645770197 0.6040564995543237 0.8824729794998045 0.8127279388632798 0.7533277392671975 0.8128097920033628 0.7762678268632497 1.0 12.50030778476509 -10.539758522174234 0.8150393724665306 1.0018414700897853 0.8137360436108427 0.0 0.11219732583918851 0.5300633942536385 0.6233216339195008 0.06025525337235084 0.016386713273728145 2.885635537571602e-11 10.539758522174234 -0.18810542647894257 ASVGPLQSGASPTPSISASASTLQLS(ph)PPRTK ddPTM_A549_PD325901_60min_R1 1 ASVGPLQSGASPTPSISASASTLQLSPPRTK 31 1 Q6N043-2;Q6N043;H0YL38;Q6N043-4;Q6N043-3 Q6N043-2 ZNF280D Zinc finger protein 280D 1 ASVGPLQSGAS(0.001)PT(0.014)PS(0.123)IS(0.123)AS(0.106)AS(0.106)T(0.106)LQLS(0.402)PPRT(0.019)K 63.625 0.00027948 3881500.0 478.7 784.7 917.45 968.35 1069.9 1147.9 887.77 1282.1 1129.9 987.68 1137.6 True False 527.2972715996852 850.8294229048892 979.7136740750284 1028.162780217586 994.7539149546258 1138.5518829850325 921.5545731563844 1256.527509712007 1082.414232333092 925.3177162414768 997.6824118405565 0.5285221683189847 0.8528058757047263 0.9819895213624356 1.0305511734147927 0.997064700298236 1.1411967069606805 0.923695318489449 1.2594463877477051 1.084928650126466 0.9274672032500012 1.0 9.962436831208327 -4.994958053746082 1.1006296429241846 1.0536945972465224 1.8121847869692808e-10 0.7390207459533984 0.09034472066652693 0.8931598536115317 0.586846269902307 0.01171391113198688 1.2517672993798286 1.0116771621968468e-05 4.994958053746082 -1.053694597065304 down ASVLDTSMS(ph)AGSGSPSKTVTPK ddPTM_A549_MK2206_60min_R1 1 ASVLDTSMSAGSGSPSKTVTPK 22 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 AS(0.007)VLDT(0.038)S(0.066)MS(0.268)AGS(0.268)GS(0.268)PS(0.066)KT(0.017)VT(0.001)PK 47.32 0.0038806999999999995 5176000.0 1828.6 2329.9 2637.7 2110.0 3255.4 2797.4 2367.7 2425.2 3506.9 3036.1 3725.8 True False 2137.2229750223028 2448.4819581924844 3011.7655227976466 2626.950094721499 2776.534972402304 3093.419011236167 2797.8804419947824 2768.9795268635094 2712.592749368544 2350.2429013369724 2800.5810331511566 0.76313555998683 0.8742764195033852 1.0754073840916039 0.9380018159180735 0.9914139028779337 1.1045632940517045 0.999035703261428 0.9887160892994802 0.9685821325142626 0.8391983211757051 1.0 11.45151045707662 -5.536916959971081 4.473004100930062 0.9957185165871112 0.7823350879423604 0.5257936352046255 0.06578226481598878 0.06856951066634406 3.345750182659167 0.006175339780417353 0.030435627549616897 2.9045779762368675e-06 5.536916959971081 -0.2133834286447508 ASVLDTSMSAGS(ph)GSPSK ddPTM_A549_PD325901_60min_R1 1 ASVLDTSMSAGSGSPSK 17 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDTS(0.047)MS(0.212)AGS(0.713)GS(0.027)PSK 320.92 1.5607999999999996e-172 46036000.0 5832.0 6687.5 5555.1 5017.6 6468.2 5555.2 5480.1 5133.1 5873.6 6300.2 5767.1 True False 6424.060346708513 7251.079094783288 5932.102491529991 5327.525756203601 6013.895946078614 5509.960293020689 5688.648204325787 5030.716293660951 5626.753017994206 5902.404296801144 5057.783260658998 1.2701335774264668 1.433647651765631 1.1728660928734764 1.0533321579124877 1.1890378919271918 1.089402216160361 1.1247315100617008 0.9946484525723784 1.1124938986138118 1.1669943120560087 1.0 12.30428949970355 -2.00000000000007 0.2668119862786202 1.0313502877685927 3.41498853201579 0.4991304863159848 0.08502138444146219 20.46443294713654 0.25243104204704414 0.030716470498933498 22.74841214966706 0.009999999999998385 2.00000000000007 2.383638244247197 ASVLDTSMSAGS(ph)GSPSKTVTPK ddPTM_A549_MK2206_60min_R1 2 ASVLDTSMSAGSGSPSKTVTPK 22 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDT(0.004)S(0.004)MS(0.028)AGS(0.536)GS(0.418)PS(0.009)KTVTPK;ASVLDT(0.003)S(0.005)MS(0.027)AGS(0.514)GS(0.431)PS(0.019)KT(0.001)VTPK 86.551 1.4296e-06 13644400.0 2182.2 2563.5 3339.1 2839.8 3514.0 2937.9 2748.4 2665.6000000000004 4718.299999999999 4519.5 4701.5 True False 2550.5020103323113 2693.971200406212 3812.6345896704042 3535.551127483467 2997.0952549676513 3248.786627979815 3247.7487041341633 3043.4569630576298 3649.6125835768325 3498.541811070932 3533.9877952010725 0.7217065134734558 0.7623034816544786 1.078847695752576 1.0004423705946346 0.8480774209343658 0.9192976366221348 0.9190039389905071 0.8611962291410423 1.0327179365284653 0.9899699755108736 1.0 11.787081342142649 -5.684232702688012 6.949219152833397 0.9834975625565238 0.7355520530340919 0.5776598408810467 0.07024268559135353 0.11041469322046828 8.113195757605448 0.010709654936022307 0.04205439886027855 2.0690324274473774e-06 5.684232702688012 -0.24794550952243188 ASVLDTSMSAGS(ph)GSPSKTVTPK ddPTM_A549_PD325901_60min_R1 5 ASVLDTSMSAGSGSPSKTVTPK 22 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDT(0.007)S(0.025)MS(0.033)AGS(0.538)GS(0.381)PS(0.015)KT(0.001)VTPK;AS(0.001)VLDT(0.085)S(0.08)MS(0.072)AGS(0.605)GS(0.134)PS(0.017)KT(0.005)VT(0.002)PK;ASVLDTSMS(0.002)AGS(0.574)GS(0.418)PS(0.006)KTVTPK;ASVLDTSMS(0.002)AGS(0.553)GS(0.402)PS(0.042)KT(0.001)VTPK;ASVLDTSMS(0.016)AGS(0.498)GS(0.425)PS(0.06)KT(0.001)VTPK 134.31 1.3784e-22 38397200.0 9597.8 9227.9 14200.7 13257.9 12288.7 17456.5 15092.599999999999 15046.5 13938.3 14806.0 13246.500000000002 True False 10572.161590473079 10005.567518317865 15164.4448977462 14076.81037212446 11425.58410571354 17314.340051684117 15666.957151987623 14746.3857537491 13352.521722743913 13871.146633192238 11617.26447648201 0.9100388143762554 0.8612670856011874 1.3053369774308832 1.2117147199860652 0.9835003867600236 1.4903973380941156 1.3485926212408963 1.2693509546590493 1.1493688337538288 1.1940114354177773 1.0 13.503982776104069 -5.741733716605573 24.962179249019727 1.146981235854319 0.8856527094507107 0.34746356191855265 0.15212420438662227 251.65114144851452 318774.3434717681 0.02367355609786823 0.09142785988553284 1.8124510385480912e-06 5.741733716605573 -0.26132852640360826 ASVLDTSMSAGSGS(ph)PSK ddPTM_A549_MK2206_60min_R1 7 ASVLDTSMSAGSGSPSK 17 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDTSMS(0.002)AGS(0.089)GS(0.893)PS(0.016)K;ASVLDTSMSAGS(0.031)GS(0.967)PS(0.001)K;ASVLDTSMS(0.001)AGS(0.043)GS(0.933)PS(0.024)K;ASVLDTS(0.001)MS(0.004)AGS(0.036)GS(0.921)PS(0.039)K;ASVLDTSMSAGS(0.028)GS(0.971)PS(0.001)K;ASVLDTSMSAGS(0.003)GS(0.996)PS(0.002)K;ASVLDTSMSAGS(0.013)GS(0.986)PSK 249.16 6.4055999999999985e-86 121461000.0 17435.999999999996 18760.2 17664.8 14687.25 24469.2 17815.300000000003 17765.0 18621.3 26174.0 26100.7 27807.199999999997 True False 20378.7705307278 19715.014048707086 20169.934263606894 18285.6269093357 20869.813094153225 19700.503221160958 20992.67054611534 21260.926300339535 20245.630791289263 20204.53374227658 20901.904800322292 0.9749719331997712 0.9432161440331072 0.9649806778995514 0.8748306474467221 0.998464651596319 0.9425219093360903 1.004342462883653 1.0171764967569705 0.9686021912690507 0.9666360044834307 1.0 14.351346801317794 -7.75363601435988 24.990034779784594 0.9890130188843472 0.949020450975967 0.29767424179523405 0.03165037227043459 174.4448388901162 558652.3514277906 0.004642872812742124 0.006815986723313767 1.763453391472417e-08 7.75363601435988 -0.03999256790838024 ASVLDTSMSAGSGS(ph)PSK ddPTM_A549_PD325901_60min_R1 3 ASVLDTSMSAGSGSPSK 17 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDTSMSAGS(0.003)GS(0.901)PS(0.096)K;ASVLDTSMSAGS(0.007)GS(0.863)PS(0.131)K;ASVLDTSMSAGS(0.04)GS(0.952)PS(0.008)K 317.97 2.1484999999999993e-172 185233000.0 29290.8 27505.699999999997 28290.2 27616.5 33299.5 29929.1 29134.6 27922.4 28660.1 29088.1 31366.0 True False 32264.3804532527 29823.701870262543 30210.143094792482 29322.308483377878 30960.65799703856 29685.36733256146 30243.333146064837 27365.465827300937 27455.61566518247 27251.472401793795 27508.180845456147 1.1729012774242464 1.084175723498956 1.0982239525222057 1.0659486589867098 1.1255072871222853 1.0791468726826021 1.0994305045460862 0.9948119063577123 0.9980891073615884 0.9906679236586176 1.0 14.747573114913585 -8.259412659455457 23.569771090561808 0.9987509886471868 1.1011155959579784 0.7896533720866916 0.02671140034254162 25.5098452783876 296666.76482208114 0.003951431866445513 0.004972191315283739 5.502845765840301e-09 8.259412659455457 0.10236460731079156 ASVLDTSMSAGSGS(ph)PSKTVTPK ddPTM_A549_MK2206_60min_R1 1 ASVLDTSMSAGSGSPSKTVTPK 22 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDTS(0.001)MS(0.022)AGS(0.161)GS(0.799)PS(0.014)KT(0.002)VTPK 102.07 2.1915000000000001e-10 4437300.0 2413.9 2530.2 2503.2 2824.7 3199.9 3100.3 2433.3 1909.4 3697.9 3620.6 3906.9 True False 2821.307305811187 2658.97637264201 2858.191400336306 3516.751626805601 2729.198948881899 3428.3716881874184 2875.3991128546277 2180.063297292258 2860.3315543328695 2802.7039453840925 2936.7089050454288 0.9607037663705873 0.9054272856508663 0.9732634362996532 1.197514544517377 0.9293392832340256 1.1674196520796751 0.979122959008478 0.7423491288315258 0.9739921956237001 0.9543690014930971 1.0 11.519984553368577 -7.981686103353772 24.999620698674164 0.9638185282204853 1.0230454460520366 0.11942460373473607 0.10905110505147517 594.65444880554 811738.1998700314 0.01720156024116518 0.023765603407402337 1.0430710613781856e-08 7.981686103353772 0.05922691783155132 ASVLDTSMSAGSGS(ph)PSKTVTPK ddPTM_A549_PD325901_60min_R1 1 ASVLDTSMSAGSGSPSKTVTPK 22 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 ASVLDTSMSAGS(0.115)GS(0.869)PS(0.013)KT(0.002)VTPK 153.94 1.3344999999999998e-29 7527700.0 2446.3 2724.1 3021.8 2908.5 3158.1 3880.1 3573.6 3723.2 3378.8 3355.4 3346.7 True False 2694.6465751291234 2953.6694672297817 3226.877519559562 3088.151439317239 2936.2859508535407 3848.501752043057 3709.595303548952 3648.937855206102 3236.8007860935045 3143.5394713638534 2935.077116479245 0.9180837396059534 1.0063345356911233 1.0994183087871792 1.0521534245143151 1.0004118577898715 1.311209756784689 1.2638834198669286 1.2432170298759184 1.102799230698303 1.0710244898555403 1.0 11.51918269399421 -5.2406228701641675 1.2609645409587849 1.09555028743086 0.826761240719993 0.24921360070521825 0.10345435987517845 2.1297606455004474 2.725781768298656 0.01768730972967543 0.7487586980207486 5.7461522627632e-06 5.2406228701641675 -0.268789046710867 ASVS(ph)GPNS(ph)PSETR ddPTM_A549_PD325901_60min_R1 1 ASVSGPNSPSETR 13 0 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.003)VS(0.997)GPNS(0.99)PS(0.009)ETR 109.07 7.704100000000001e-05 24084000.0 1062.6 848.02 891.61 639.41 739.33 640.72 838.41 788.3 523.03 794.11 766.53 True False 1170.4743697552246 919.4856215264493 952.1200162864848 678.9049034945282 687.4020113500361 635.5021887500392 870.3161513455557 772.5767380906129 501.0488679858193 743.9697590763393 672.2516694340208 1.7411252704521587 1.3677699339900171 1.4163148409703312 1.009896939439524 1.0225367114800483 0.9453337457459622 1.2946284716232666 1.1492373663289783 0.7453293026518777 1.1066833938883323 1.0 9.39285762258941 -2.000000000013307 0.3541585594801696 0.9013406057087918 11.113846525073825 0.6292583849880459 0.1592631515091636 21.98190846533386 0.26930017751615387 0.04368943978775329 152.79714777186803 0.009999999999693593 2.000000000013307 10.212505919365032 ASVS(ph)GPNS(ph)PSETRR ddPTM_A549_MK2206_60min_R1 2 ASVSGPNSPSETRR 14 1 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.033)VS(0.967)GPNS(0.982)PS(0.009)ET(0.009)RR;AS(0.049)VS(0.951)GPNS(0.992)PS(0.004)ET(0.005)RR 63.43600000000001 0.0013925 221760000.0 2737.0 2816.3999999999996 3380.6 2490.4 3421.7 3010.8999999999996 2997.6 2907.0 4454.5 4147.0 4051.8999999999996 True False 3198.938686774604 2959.742730182972 3860.0199137012273 3100.548111798304 2918.3724626985827 3329.5114395263327 3542.2251184371166 3319.0761523141236 3445.5628623748 3210.189819783416 3045.7014032490124 1.0503126417324185 0.9717770517574889 1.2673664954757344 1.0180079073052872 0.9581938858436349 1.0931838019231186 1.16302442342458 1.0897575674271573 1.1312871507033597 1.0540067441801535 1.0 11.572558793405234 -11.010035339400348 1.3159767287766704 1.0003728952936077 1.0873802983289647 0.046067459145960776 0.08464577753535756 0.7519120091951145 2.33458342984337 0.057465559056430374 0.013281399699028052 9.771577044669448e-12 11.010035339400348 0.08700740303535692 ASVS(ph)GPNS(ph)PSETRR ddPTM_A549_PD325901_60min_R1 2 ASVSGPNSPSETRR 14 1 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.032)VS(0.968)GPNS(0.925)PS(0.037)ET(0.037)RR;AS(0.023)VS(0.977)GPNS(0.999)PS(0.001)ETRR 84.65299999999999 5.6563999999999996e-05 257460000.0 2672.4 3252.8 2933.6000000000004 3481.7 3974.0 3937.1000000000004 3241.8 3105.0 3787.8 4085.8 3929.6 True False 2943.7000806830997 3526.9248717025926 3132.691737169874 3696.756701485586 3694.879949555737 3905.0375629413456 3365.168472981026 3043.068339174622 3628.611938429318 3827.8218907130095 3446.284111786789 0.8541663963847963 1.023399336009472 0.9090056523359802 1.0726790309719807 1.0721344583630568 1.1331153892929355 0.9764628695213097 0.8829998457663109 1.0529056284184295 1.1107099027678264 1.0 11.750825926959092 -4.319438640906796 1.0730530844606205 1.022357722104683 1.65780381761957e-12 0.2997259256877892 0.07437926118270939 10.36965714584584 2.0575335869596105 0.010251652336771399 19.533234154198684 4.79249158618951e-05 4.319438640906796 -1.0223577221030251 ASVS(ph)GPNSPS(ph)ETR ddPTM_A549_MK2206_60min_R1 1 ASVSGPNSPSETR 13 0 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.01)VS(0.988)GPNS(0.146)PS(0.773)ET(0.082)R 58.486999999999995 0.013090000000000001 13962000.0 554.06 658.58 277.03 340.56 643.43 342.13 378.69 514.75 576.9 576.03 654.83 True False 647.5717825335537 692.0989089773834 316.31701966889034 423.9972152883194 548.7822993465671 378.3339695124864 447.49307115724315 587.7173888557605 446.23307111999543 445.90442292979037 492.2176386114045 1.3156208387013901 1.4060831117914916 0.6426364982800139 0.8614019125451462 1.1149179880971702 0.7686314748488182 0.9091366014831694 1.194019358009539 0.9065767581569483 0.9059090693859156 1.0 8.94315254745143 -5.736566363163198 24.99960888986103 0.9439786584504485 1.3608524585188282 0.572736624785493 0.14504098502193707 119.93339650790121 120541.90765821726 0.018759410035968198 0.07259219202376237 1.8341448758382687e-06 5.736566363163198 0.4168738000683797 ASVS(ph)GPNSPS(ph)ETRR ddPTM_A549_MK2206_60min_R1 1 ASVSGPNSPSETRR 14 1 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.008)VS(0.823)GPNS(0.282)PS(0.57)ET(0.317)RR 80.53399999999999 0.00083405 22908000.0 666.96 557.81 668.9 525.28 638.88 406.09 506.93 290.13 759.46 953.61 938.49 True False 779.5265423935658 586.2001464008538 763.760078173919 653.9736235807153 544.9015983192186 449.0621742592742 599.0326191917957 331.25681598586056 587.4435226084106 738.1888386890914 705.4370319936734 1.1050263978777866 0.8309744453649707 1.0826764736399161 0.9270474810947837 0.7724312356827129 0.636573009202757 0.8491652578811145 0.46957673181641446 0.8327370069419308 1.0464276827130217 1.0 9.46237350195979 -6.526790697473297 21.866999216639368 0.8486536450678084 0.9913941964201389 0.19944979413241481 0.1661709077394628 39.4855688082004 220717.6191084526 0.02518671261996468 0.05271096713167176 2.973098532347269e-07 6.526790697473297 0.14274055135233055 ASVS(ph)GPNSPSETR ddPTM_A549_MK2206_60min_R1 2 ASVSGPNSPSETR 13 0 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 1 AS(0.055)VS(0.944)GPNSPSETR;AS(0.159)VS(0.835)GPNS(0.006)PSETR 74.475 0.001144 3093300.0 1083.17 1240.83 1130.83 960.78 1741.4499999999998 1332.0900000000001 1130.24 1116.6 1814.99 1705.75 1874.97 True False 1265.982615036042 1303.9829469865576 1291.1986981632722 1196.1711431310532 1485.2850118848658 1473.0508796302224 1335.5899779364715 1274.8814694440841 1403.8976629434585 1320.4198903051752 1409.3632024605247 0.8982656939146965 0.9252284611305377 0.9161575212897882 0.8487316406748296 1.0538695840020469 1.045188974040552 0.9476549235887124 0.9045797898074416 0.9961219794106131 0.9368911349465712 1.0 10.46082773652603 -6.7583592521793685 24.99999831501326 0.9938749829130764 0.9004668558753276 0.43974485566564725 0.045897971250573696 51.36559264516227 416903.4419112952 0.006317650711707607 0.012720367094004065 1.7443785907704499e-07 6.7583592521793685 -0.09340812703774881 ASVS(ph)GPNSPSETRR ddPTM_A549_MK2206_60min_R1 2 ASVSGPNSPSETRR 14 1 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 1 AS(0.012)VS(0.987)GPNS(0.001)PSETRR;AS(0.053)VS(0.938)GPNS(0.008)PSETRR 100.58 1.3069000000000001e-05 22844000.0 2900.6000000000004 2508.2 2330.5 2327.0 3502.8 2407.0 2260.94 2249.5 3507.5 4029.2000000000003 4345.2 True False 3390.1503671386245 2635.856666611608 2660.999943465868 2897.1151044630005 2987.5427601311003 2661.707142362711 2671.7235319186047 2568.373513804824 2713.0568503265486 3119.0009215990694 3266.1669185808146 1.0379599241705877 0.8070183589260395 0.8147164580988719 0.8870076688309086 0.9146938397836754 0.8149329806816034 0.8179996915404122 0.7863570900781797 0.8306546842086692 0.954942291484083 1.0 11.673382806870716 -10.698709908733802 0.9823516025891781 0.9991127104292461 0.8521287740668912 0.3051278654828271 0.06886505796684661 0.4310536968996288 0.7465687989908399 0.043428452841617685 0.011656557490256444 2.001198143256383e-11 10.698709908733802 -0.14698393636235485 ASVS(ph)GPNSPSETRR ddPTM_A549_PD325901_60min_R1 2 ASVSGPNSPSETRR 14 1 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 1 AS(0.015)VS(0.985)GPNSPSETRR;AS(0.082)VS(0.903)GPNS(0.015)PSETRR 111.58 3.6963e-06 25350000.0 4436.4 3619.2 4108.5 3657.3 5649.3 5081.0 4139.4 4590.0 5270.700000000001 5042.1 5433.2 True False 4886.780062094933 3924.2026855835043 4387.327516417517 3883.203114669053 5252.512657026984 5039.622020600183 4296.927132166592 4498.44884921466 5049.190808352982 4723.740945509832 4764.950843892505 1.0255677806956986 0.8235557541193457 0.9207497957803681 0.8149513482697024 1.1023225273686534 1.0576440735080697 0.9017778510085147 0.9440703580353962 1.0596522343614105 0.9913514536177234 1.0 12.218245615767229 -6.759960447080655 24.999929628627353 1.0191284013458364 0.8927699768097175 0.3410864777942515 0.07376482010804017 30.306034835227734 512276.77114478743 0.01033902721778915 0.020646379437274362 1.7379591043641157e-07 6.759960447080655 -0.1263584245361189 ASVS(ph)PMDEPVPDSESPIEK ddPTM_A549_MK2206_60min_R1 5 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.211)VS(0.789)PMDEPVPDSESPIEK;AS(0.087)VS(0.913)PMDEPVPDSESPIEK;AS(0.191)VS(0.809)PMDEPVPDSESPIEK;AS(0.016)VS(0.984)PMDEPVPDSESPIEK;AS(0.001)VS(0.999)PMDEPVPDSESPIEK 258.34 1.4452999999999995e-97 122493700.0 8430.699999999999 8845.23 9710.699999999999 8024.2300000000005 12570.7 9483.099999999999 9654.349999999999 9777.6 13845.3 12529.4 13168.1 True False 9853.596049174515 9295.41442596802 11087.823278701566 9990.166710221367 10721.566682305598 10486.595347627685 11408.420427069435 11163.604742644162 10709.361656400892 9698.999837953785 9898.097348928479 0.9955040551547232 0.9391112350470363 1.1201974367227132 1.0093017231541832 1.0831947094828547 1.0594556688981154 1.1525872119558873 1.127853601465405 1.0819616416038014 0.9798852745173043 1.0 13.27293551600882 -5.748597226695191 24.997998743190422 1.0594245603994739 0.9673076236467029 0.3323889922470715 0.054010322838474976 221.0647233227744 430307.42019956827 0.007672454220186695 0.029338288861400035 1.7840325475771943e-06 5.748597226695191 -0.092116936752771 ASVS(ph)PMDEPVPDSESPIEK ddPTM_A549_PD325901_60min_R1 3 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.207)VS(0.793)PMDEPVPDSESPIEK;ASVS(1)PMDEPVPDSESPIEK;ASVS(1)PMDEPVPDSESPIEK 332.26 1.1354999999999994e-205 146459000.0 17972.2 18108.1 18731.8 20477.0 22817.7 19975.6 19163.9 20107.8 21159.8 21496.2 23854.3 True False 19796.724513565634 19634.133137382472 20003.05259146396 21741.81778335882 21215.06346879163 19812.925336489076 19893.192701388467 19706.73415473605 20270.527191186626 20138.926263435565 20920.372324866545 0.9462893014592617 0.9385173854695114 0.9561518447588891 1.0392653364737625 1.0140863240552755 0.9470637055985315 0.9509005094399232 0.9419877356251479 0.9689372099316084 0.9626466465655522 1.0 14.352620907351255 ASVS(ph)QTSPQSASSPR ddPTM_A549_MK2206_60min_R1 2 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVS(1)QTSPQSASSPR;AS(0.015)VS(0.956)QT(0.029)SPQSASSPR 162.29 8.622900000000001e-20 7623500.0 2779.9 2083.7 2177.9 1629.1599999999999 2433.6 1829.9 1549.4499999999998 1369.48 2023.2 3278.4 3150.7 True False 3249.0791579703014 2189.7514297977054 2486.7589688368635 2028.3042731357712 2075.620663770426 2023.5388034106877 1830.9650085943376 1563.6079838566052 1564.948430386507 2537.8071630523145 2368.294235103695 1.371906881252887 0.9246112232764135 1.05002112152166 0.8564409958321596 0.876420097218007 0.8544288008715639 0.7731155113478412 0.6602253895146365 0.6607913861336517 1.0715759576812875 1.0 11.209632616116538 -2.0000000000030327 0.6824299399506468 0.8209896202894384 59.19960778249514 0.5606379255400629 0.12905267126927827 138.8961861893668 0.7325872794827164 0.0227485939671589 12354.876529140616 0.00999999999993017 2.0000000000030327 58.378618162205704 ASVS(ph)QTSPQSASSPR ddPTM_A549_PD325901_60min_R1 1 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVS(1)QTSPQSASSPR 159.18 1.384e-19 4991100.0 1876.6 2119.2 2249.8 2228.5 2684.0 2027.2 1890.6 2801.7 2496.8 2335.1 2112.8 True False 2067.111050520097 2297.792421333047 2402.484957146437 2366.1493837092885 2495.485099297332 2010.6911553160187 1962.547817576017 2745.817895608868 2391.868178855885 2187.6613874893415 1852.938994142693 1.1155850554467368 1.2400799101301099 1.2965807102883087 1.2769710126393259 1.34677132230785 1.0851361872527885 1.059154037871623 1.4818717207035126 1.2908510136689852 1.1806440440860364 1.0 10.855599667756005 -10.736740464984765 1.015835905105063 1.0014626292073738 1.2468910156785282 0.12639950773844622 0.12725221066711564 0.45332592092741664 0.8392900547072908 0.07839194463132967 0.020701740596428472 1.8334097433901735e-11 10.736740464984765 0.2454283864711544 ASVSGPNS(ph)PS(ph)ETRR ddPTM_A549_MK2206_60min_R1 1 ASVSGPNSPSETRR 14 1 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.003)VS(0.523)GPNS(0.783)PS(0.652)ET(0.04)RR 70.622 0.0037158 20062000.0 653.19 478.52 401.44 447.54 534.99 380.33 370.55 466.98 483.59 827.97 815.66 True False 763.4325030377435 502.874624075826 458.3702284080399 557.1873200908339 456.29367969696744 420.57626815737825 437.8741385231094 533.175845066271 374.05763713454456 640.9310019498613 613.1091109292155 1.245182120814843 0.8202041286153449 0.7476160771992826 0.9087898224940293 0.7442291617644015 0.685972954340805 0.7141863180918587 0.8696263610537457 0.6100996225086763 1.0453783682621833 1.0 9.260000033329794 -5.2626484407159015 5.209833453165893 0.7981552438289644 1.2642683780881934 0.48066478421100434 0.12780805368245277 0.11053487407395525 10.159925047971678 0.019427350743684787 0.18380895651903464 5.461998283031314e-06 5.2626484407159015 0.46611313425922896 ASVSGPNS(ph)PS(ph)ETRR ddPTM_A549_PD325901_60min_R1 1 ASVSGPNSPSETRR 14 1 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 2 AS(0.01)VS(0.402)GPNS(0.78)PS(0.537)ET(0.271)RR 56.122 0.024021 37590000.0 563.29 602.03 699.19 653.69 777.57 543.56 446.97 848.78 541.47 628.39 866.81 True False 620.4747861278191 652.7651809244687 746.6412379710273 694.0669466622955 722.9561656708744 539.1334275767438 463.97968794136887 831.8504170449711 518.7138989126468 588.7133481582918 760.1978651613157 0.8162016950628412 0.8586779979787901 0.982166975452619 0.9130082817517686 0.9510105181858955 0.7092014491021209 0.610340687871981 1.0942551343109213 0.6823406414099499 0.7744212068174717 1.0 9.570231163507216 -5.260392487376906 17.73835168323435 0.8577827783370207 0.8162014318636486 0.0068737956311896165 0.14282586571320643 12.842538999765976 215086.3101997042 0.02101226913233715 0.17448696442353653 5.490444585633371e-06 5.260392487376906 -0.04158134647337208 ASVSGPNS(ph)PSET(ph)RR ddPTM_A549_PD325901_60min_R1 1 ASVSGPNSPSETRR 14 1 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 2 ASVS(0.446)GPNS(0.767)PS(0.304)ET(0.482)RR 109.55 2.0761e-05 35006000.0 1447.3 1475.7 1318.8 1216.9 1269.6 1392.3 1552.1 1559.3 1588.0 1506.2 1624.1 True False 1594.228830554052 1600.062417969601 1408.3016985886381 1292.0651492195802 1180.4276758822248 1380.961570415594 1611.1660148417093 1528.198538252814 1521.261882418754 1411.0982749502998 1424.3459960181503 1.1192707635720673 1.12336638881471 0.9887356741449304 0.9071287122873448 0.8287506541122629 0.9695408098005398 1.1311619644003819 1.0729124401830665 1.0680423764110254 0.9906990849801345 1.0 10.476083926828 ASVSGPNS(ph)PSETR ddPTM_A549_MK2206_60min_R1 2 ASVSGPNSPSETR 13 0 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 1 ASVSGPNS(0.946)PS(0.052)ET(0.002)R;ASVS(0.001)GPNS(0.992)PS(0.007)ETR 136.14 1.8719999999999998e-08 95881000.0 3283.8999999999996 3319.5 3181.8 3355.3 3574.9 3526.1000000000004 3433.5 4045.6 4599.4 4903.799999999999 4580.0 True False 3838.142036353352 3488.4483712691285 3633.027084368031 4177.348650625143 3049.0369456413937 3899.229561564251 4057.3225060561235 4619.076189130385 3557.643243732551 3796.0281741629897 3442.659598430486 1.1148770090726272 1.0133004067144826 1.0552966334587173 1.2134074052890977 0.8856632084773803 1.1326212917890333 1.1785430391973297 1.3417173720097766 1.0333996557064447 1.1026440650401814 1.0 11.749307822545052 -8.974508303499517 24.9997275187459 1.0147349936978924 1.1143821070769795 0.058318093756072775 0.11277609883614445 252.0917679596811 247229.1580191381 0.019356518526963292 0.02011580830061377 1.0604536628196308e-09 8.974508303499517 0.09964711337908705 ASVSGPNS(ph)PSETR ddPTM_A549_PD325901_60min_R1 2 ASVSGPNSPSETR 13 0 O15344-2;O15344;A0A087X0X0;C9J453;A0A087X255 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 1 ASVSGPNS(0.982)PS(0.018)ETR;ASVSGPNS(1)PSETR 236.65 1.9832e-56 107906000.0 18618.6 18728.8 18806.9 18385.6 21052.4 18968.800000000003 18414.4 19136.9 20414.8 19893.9 21910.4 True False 20508.7465657111 20307.141704729314 20083.249329076934 19521.236755272817 19573.752050837258 18814.324381885606 19115.170068746324 18755.199516892375 19556.836950379336 18637.795758885793 19215.559701469178 1.0672989433736373 1.0568071927239608 1.0451555739769274 1.0159077881962641 1.018640745048956 0.9791192488890712 0.9947756071494925 0.9760423223820223 1.0177604636144981 0.9699324947303404 1.0 14.229987378681049 -6.1857967279274995 1.3982884350914797 1.003172494609 1.065633041556614 0.7313476097588223 0.016266364482465236 0.18382312849900354 0.6474343489845004 0.0021647085201190962 0.009797055111671334 6.51933460929178e-07 6.1857967279274995 0.06246054694761405 ASVSPMDEPVPDS(ph)ESPIEK ddPTM_A549_MK2206_60min_R1 1 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASVSPMDEPVPDS(0.794)ES(0.206)PIEK 186.75 5.5152e-44 56646000.0 2337.3 2296.4 2112.3 2008.9 2747.8 2406.9 3285.9 2346.4 3479.0 3613.2 3655.7 True False 2731.779098501383 2413.2769512825535 2411.855902417056 2501.080590182947 2343.602259988649 2661.596560429086 3882.9054966214676 2679.00938554863 2691.0120548213995 2796.975610523616 2747.8887978127327 0.9941374267677161 0.8782294804664134 0.8777123384093444 0.9101826071614542 0.8528737632520327 0.968596896114452 1.4130504479337689 0.9749336973465121 0.9793016576811238 1.0178634640346274 1.0 11.424107906689192 -7.519809954645709 24.9996778072527 1.0249557078053007 0.9013500786997689 0.27235210051167913 0.12358577143805131 169.78864195175623 1383172.6328951882 0.019341614003399475 0.028998586598964836 3.021273527173745e-08 7.519809954645709 -0.12360562910553174 ASVSPMDEPVPDS(ph)ESPIEK ddPTM_A549_PD325901_60min_R1 1 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.003)VS(0.002)PMDEPVPDS(0.497)ES(0.497)PIEK 43.45399999999999 0.014565999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ASVSPMDEPVPDSES(ph)PIEK ddPTM_A549_MK2206_60min_R1 7 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASVSPMDEPVPDS(0.042)ES(0.958)PIEK;ASVSPMDEPVPDS(0.301)ES(0.699)PIEK;ASVSPMDEPVPDS(0.047)ES(0.953)PIEK;ASVSPMDEPVPDSES(1)PIEK;ASVSPMDEPVPDS(0.046)ES(0.954)PIEK;ASVSPMDEPVPDS(0.021)ES(0.979)PIEK;ASVSPMDEPVPDS(0.049)ES(0.951)PIEK 385.12 0.0 146592100.0 12743.71 14137.78 14149.970000000001 13243.75 19357.399999999998 17317.0 14486.33 15526.63 21401.3 20916.100000000002 19214.0 True False 14894.536694204011 14857.332614659226 16156.648517504278 16488.469344534537 16509.952102592717 19149.47344590572 17118.30864690724 17727.577350810145 16553.939720853476 16191.138483137664 14442.633520577147 1.0312895271477336 1.0287135371462024 1.1186774554990326 1.1416525470263152 1.1431400013764912 1.3258990071736227 1.1852622738448584 1.2274477037413414 1.1461856798670578 1.121065521746386 1.0 13.818046211847989 -4.110326418184511 16.113257244421984 1.1089467782644586 1.1188876637828102 0.0 0.09300016891062426 0.0 0.0 0.014395817008286325 0.0 7.756639041137116e-05 4.110326418184511 0.009940885518351594 ASVSPMDEPVPDSES(ph)PIEK ddPTM_A549_PD325901_60min_R1 4 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASVSPMDEPVPDS(0.127)ES(0.873)PIEK;ASVSPMDEPVPDS(0.019)ES(0.981)PIEK;ASVSPMDEPVPDS(0.002)ES(0.998)PIEK;ASVSPMDEPVPDS(0.028)ES(0.972)PIEK 310.98 9.897599999999997e-163 270349000.0 17019.899999999998 17050.1 16713.0 17180.800000000003 20331.1 17103.0 16785.4 18938.0 19142.9 18729.0 21703.2 True False 18747.74771861183 18486.97176433114 17847.24468343337 18242.018995572158 18903.113674487337 16963.718838481574 17424.17758232333 18560.2667334264 18338.390484227948 17546.447743688863 19033.84398792015 0.9849690756375911 0.9712684298591455 0.9376584516905857 0.9583991025223005 0.99313169144836 0.8912397752785836 0.9154313544537616 0.9751192005779649 0.9634622673100834 0.9218551835785107 1.0 14.216279330666357 -9.965981471401232 0.7598245360591636 0.9972234745111045 0.952466912071507 0.0 0.03630541572636772 0.627797482640915 0.736115054040879 0.013756086506749908 0.006200844218157113 1.0814800902291344e-10 9.965981471401232 -0.04475656243959747 ASVSQTS(ph)PQSASSPR ddPTM_A549_MK2206_60min_R1 2 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVSQT(0.104)S(0.699)PQS(0.023)AS(0.15)S(0.023)PR;ASVSQT(0.018)S(0.859)PQS(0.003)AS(0.108)S(0.011)PR 183.41 2.9859999999999996e-33 29865000.0 1986.3600000000001 2214.9700000000003 1568.83 1804.99 2172.2799999999997 1933.13 1739.0900000000001 1721.75 2595.78 3266.2 2911.02 True False 2321.6090061606133 2327.7025120982044 1791.3136843199127 2247.21263102908 1852.740489601916 2137.6925334921593 2055.0601418544193 1965.8133351382342 2007.8399746088805 2528.363151525582 2188.133393935177 1.0609997601587677 1.0637845565310915 0.8186492145702247 1.0269998334003092 0.8467219113501646 0.9769479956830676 0.9391841226638215 0.8983973923102015 0.917604009048985 1.1554885815158324 1.0 11.095484975673102 -5.633062860447077 22.45299192876091 0.9452899004388038 1.062519226102045 0.1841975846487881 0.08718668244678278 2.936358418669097 579.5037359903647 0.007927409951946839 0.030702774542818428 2.327754310563877e-06 5.633062860447077 0.11722932566324129 ASVSQTS(ph)PQSASSPR ddPTM_A549_PD325901_60min_R1 2 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVSQT(0.165)S(0.827)PQS(0.007)AS(0.001)SPR;ASVS(0.001)QT(0.019)S(0.468)PQS(0.468)AS(0.042)S(0.002)PR 179.79 3.534e-28 49263000.0 3409.1 3000.7 3289.8 3654.8 4236.299999999999 3946.5 3270.8 3379.8999999999996 3261.2 3359.2 3871.6 True False 3755.1893223532247 3253.5795199575664 3513.0656111744797 3880.5486953469645 3938.7569024416107 3914.361012457907 3395.2720838504365 3312.4852430197443 3124.1431051284903 3147.0995387153425 3395.4177440944964 1.105957972000489 0.9582265762780963 1.0346490110928481 1.1428781339486829 1.1600212990852512 1.1528363540144615 0.9999571009357204 0.9755751700305528 0.9201056661031408 0.9268666702908521 1.0 11.729373367308163 -7.93939013297489 5.872831557057092 0.963285511103362 1.088890344302772 0.5525385004205012 0.058090141202381713 0.13877727180009478 9.546967514651106 0.010232468198899305 0.014166508317360573 1.1497670726063827e-08 7.93939013297489 0.12560483319940996 ASVVDPSTESSPAPQEGSEQPASPAS(ph)PLSSR ddPTM_A549_MK2206_60min_R1 2 ASVVDPSTESSPAPQEGSEQPASPASPLSSR 31 0 Q66K14-2;Q66K14 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 ASVVDPSTESSPAPQEGS(0.034)EQPAS(0.03)PAS(0.797)PLS(0.064)S(0.074)R;ASVVDPSTESSPAPQEGS(0.001)EQPAS(0.045)PAS(0.603)PLS(0.163)S(0.188)R 61.608000000000004 0.00037089 6169100.0 1312.8400000000001 1164.99 1205.49 1067.92 1860.15 1789.29 1038.85 1553.83 1907.0900000000001 1865.49 1937.86 True False 1534.41529614365 1224.2830149253873 1376.446608817278 1329.5604479407505 1586.5243991258042 1978.6314801654235 1227.5955979077917 1774.0901609048012 1475.1371599969357 1444.074513360927 1456.635879784825 1.0533966088836935 0.8404866527839744 0.9449489937187374 0.9127610176244965 1.089170204540181 1.3583569563436182 0.8427607852754064 1.2179366068937356 1.0127013761427075 0.991376454062251 1.0 10.50842457175527 -6.752106500330384 24.786411250582884 1.041776015360363 0.9314439424414888 0.16367294577476021 0.13548469843970015 283.7154019500174 753489.8926579576 0.018439679322943034 0.03797508142722637 1.7696749346676747e-07 6.752106500330384 -0.11033207291887426 ASWES(ph)LDEEWR ddPTM_A549_PD325901_60min_R1 1 ASWESLDEEWR 11 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 ASWES(1)LDEEWR 78.692 0.0010299 1076200.0 766.04 612.53 554.97 571.36 712.42 613.16 547.36 602.77 848.59 633.41 910.03 True False 843.8078168711576 664.1500527742219 592.6336015057149 606.6516095472916 662.382076915576 608.1666282525501 568.1900843268845 590.747279486083 812.9267133512157 593.4163845015729 798.1020791554695 1.0572680348910413 0.8321617874708558 0.7425536369142455 0.7601178162437997 0.8299465622448838 0.762016093099389 0.7119265807804037 0.7401901271967568 1.01857485976159 0.7435344425233303 1.0 9.640429472153347 -8.769545845420192 24.999932504783104 1.008771480701003 0.7982421445380051 0.03613864683344836 0.11926338074303056 97.96859111673649 302129.4171749796 0.015239021829745094 0.0163612536732689 1.7000204849395518e-09 8.769545845420192 -0.21052933616299796 ASYDVSDSGQLEHVQPWS(ph)V ddPTM_A549_MK2206_60min_R1 2 ASYDVSDSGQLEHVQPWSV 19 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 ASYDVSDSGQLEHVQPWS(1)V;ASYDVSDSGQLEHVQPWS(1)V 97.12100000000001 1.6394e-06 3798500.0 1723.71 1931.29 1651.6599999999999 1784.2200000000003 3204.4 1832.48 1706.92 2075.0 2939.4 3011.3999999999996 3511.8 True False 2014.6301073365928 2029.5844117934498 1885.8902238252874 2221.3539800966796 2733.0370048430113 2026.3918172982235 2017.0452692696424 2369.1376044209865 2273.630593257265 2331.122648491867 2639.723139250694 0.7631975025640231 0.7688626059358494 0.7144272805672386 0.8415102125926843 1.035349868402792 0.7676531630030832 0.7641124325796517 0.8974947293500956 0.8613140368586732 0.8830936145650389 1.0 11.366170908724722 -14.999999999874113 0.08555733609166367 1.5968953630743086 0.6589971380154366 0.25529238442254576 0.08503433401959774 96.7526159619316 0.6076920779025629 10.706549180461403 0.9502603538824722 1.0000000002898652e-15 14.999999999874113 -0.937898225058872 AT(ph)ASGKVSPDHLDPER ddPTM_A549_MK2206_60min_R1 1 ATASGKVSPDHLDPER 16 1 G3V2D8;Q68DK2-4;Q68DK2-5;Q68DK2-2;Q68DK2;G3V230 G3V2D8 ZFYVE26 Zinc finger FYVE domain-containing protein 26 1 AT(0.386)AS(0.386)GKVS(0.228)PDHLDPER 57.482 0.0048433999999999994 5892000.0 1618.6 1310.1 1189.3 968.68 2035.7 1325.5 1127.0 1273.9 1824.5 1892.9 2231.6 True False 1891.780109029365 1376.7784941104642 1357.9606233700729 1206.0066434856972 1736.2512266754838 1465.7635302043104 1331.7613118757106 1454.4792261551304 1411.2536631278085 1465.2925753238553 1677.4321309732468 1.127783398265868 0.8207655431708326 0.8095472825968724 0.7189600230120616 1.035064963056425 0.8738139106432127 0.7939285812434165 0.8670867806205912 0.8413178912395094 0.8735331512182802 1.0 10.71203868072146 -10.787614697920038 0.9887759072634218 1.0015029032711968 0.8687715287330298 0.0 0.11441426817478095 0.79838182375906 1.360366984795263 0.07557852951703842 0.018149627742343247 1.6307421705373825e-11 10.787614697920038 -0.13273137453816708 AT(ph)ISDEEIER ddPTM_A549_MK2206_60min_R1 1 ATISDEEIER 10 0 C9J0A7;Q9UQN3;Q9UQN3-2 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 AT(0.5)IS(0.5)DEEIER 45.358999999999995 0.04965 33256000.0 336.63 272.13 281.36 69.579 243.81 361.38 336.06 249.71 401.95 464.0 603.85 True False 393.4449141866769 285.9802546387917 321.26107877861256 86.62585812351999 207.94587197315408 399.6209917353703 397.1177519689006 285.1071572048021 310.908966782254 359.1820777380047 453.8973795878269 0.8668146851694861 0.6300548703288028 0.7077835061976826 0.19084899366941227 0.45813410987740144 0.8804214558327178 0.874906465266474 0.6281313134341091 0.6849763421515737 0.7913288198847263 1.0 8.826222349197128 -7.268578934103632 24.88134317897236 0.8329789542186459 0.5605331021654892 0.29454626246731885 0.18215455050177104 516.226650495898 1799048.5477564612 0.030733998498132513 0.04975833255682327 5.3879190970216006e-08 7.268578934103632 -0.27244585205315663 AT(ph)NESEDEIPQLVPIGK ddPTM_A549_MK2206_60min_R1 2 ATNESEDEIPQLVPIGK 17 0 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AT(0.582)NES(0.418)EDEIPQLVPIGK;AT(0.5)NES(0.5)EDEIPQLVPIGK 78.285 0.00038152 2688400.0 466.11 803.72 956.81 591.45 945.67 698.08 1042.6 668.41 841.97 1048.0 930.43 True False 544.7779727046072 844.6259150343204 1092.500045444144 736.3552765511995 806.5631957214739 771.9503622519992 1232.0269243670061 763.1591644197742 651.2651393498056 811.2560721323895 699.3785524383567 0.778945780944039 1.2076806074329336 1.5621011562839384 1.0528708293726263 1.1532569777975348 1.1037661357509803 1.7616023826747205 1.091196122270334 0.931205478176582 1.159967044033558 1.0 9.449929743938371 -8.518956122212671 24.468342693722576 0.9698129847496414 1.2426123327394623 0.10260667750775676 0.25035529711096494 143.91046164026812 897681.0221964284 0.03949623656445304 0.045304233189802 3.027219259694128e-09 8.518956122212671 0.27279934798982086 AT(ph)PAQT(ph)PR ddPTM_A549_MK2206_60min_R1 2 ATPAQTPR 8 0 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 2 AT(1)PAQT(1)PR;AT(1)PAQT(1)PR 63.623999999999995 0.037009 20506100.0 937.71 1010.63 772.51 755.69 774.83 757.64 636.22 620.26 811.86 983.26 1149.92 True False 1095.9725231916013 1062.0667502502547 882.063534145813 940.8340839242131 660.8535334110945 837.8129619192707 751.8129386349289 708.1837544665841 627.9750062740159 761.140883096272 864.3631278225284 1.267953812366493 1.228727505910362 1.0204779747695565 1.088470867902854 0.7645554421969529 0.9692835510346884 0.8697883035904923 0.819312776854115 0.7265175781572119 0.8805799999980447 1.0 9.75549372050734 -5.9936992369415085 0.9713131680489939 0.8646363128557966 1.3159989579335705 0.7205628723256223 0.08950098936333883 0.416477479256974 0.5601358650981139 0.017511665942636406 0.1497943351084283 1.0146137955516666e-06 5.9936992369415085 0.4513626450777739 AT(ph)PAQTPR ddPTM_A549_MK2206_60min_R1 2 ATPAQTPR 8 0 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 AT(0.995)PAQT(0.005)PR;AT(1)PAQTPR 110.47 0.0016867000000000002 139250000.0 7015.9 6617.5 5953.1 4832.0 6874.6 4842.5 4120.4 5188.7 7677.4 7375.2 6690.1 True False 8200.012397713534 6954.302484372188 6797.339096093825 6015.840216916721 5863.355446727554 5354.930135808655 4869.023344678505 5924.214114727315 5938.481158288533 5709.137197701145 5028.763532633141 1.630621989779638 1.3829050499677809 1.351691932218302 1.1962861601819506 1.1659636426884061 1.0648601989453117 0.9682346988642369 1.178065756379939 1.1809028441588005 1.1352964124586207 1.0 12.295987999876692 -4.7453494569194845 0.5406547571591395 1.0792053971070643 2.352455334339014 0.855544665027965 0.06873953959112074 1.8584415479304255 0.24532673325097176 0.015097776636805914 1.687983284605822 1.7974240281235576e-05 4.7453494569194845 1.27324993723195 AT(ph)PAQTPR ddPTM_A549_PD325901_60min_R1 2 ATPAQTPR 8 0 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 AT(1)PAQTPR;AT(0.993)PAQT(0.007)PR 117.02 0.0013486 188481000.0 7411.8 7640.6 7154.799999999999 7894.299999999999 9571.7 7448.6 7664.4 7906.3 8478.2 9179.3 9078.099999999999 True False 8164.240479721223 8284.500176688034 7640.367753307547 8381.912981743877 8899.41681257239 7387.941071175455 7956.072936120604 7748.602644127641 8121.890737734693 8599.71743145086 7961.551250817299 1.0254585095942348 1.0405635680405352 0.9596581762283097 1.052798973175413 1.1177993499267889 0.9279524603219808 0.9993119036072107 0.9732528749761176 1.0201392268750307 1.0801560098690628 1.0 12.958833841539029 -7.270970338109284 24.972666482397006 1.0007629734831218 1.0356586935682024 0.1378504362928621 0.04832147826375591 1065.1229967033964 2790789.04739166 0.006281751043761806 0.010117748831613623 5.358332531536393e-08 7.270970338109284 0.03489572008508057 AT(ph)PEDLVR ddPTM_A549_PD325901_60min_R1 2 ATPEDLVR 8 0 Q8N0Z3;C9IZF0;C9J5T2 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 AT(1)PEDLVR;AT(1)PEDLVR 53.751000000000005 0.025842 5041900.0 515.92 427.65999999999997 373.41999999999996 543.55 450.03 494.40999999999997 513.99 533.53 652.33 599.19 469.05999999999995 True False 568.2958185997695 463.7004090729007 398.7625267568769 577.1238490083842 418.4214453192169 490.3836888811128 533.5501707161204 522.8883256038121 624.9148386386813 561.357041141595 411.368593616325 1.3814759498383276 1.1272139299612758 0.9693557868659136 1.4029360966400264 1.017144847254601 1.1920785798696232 1.2970124092986828 1.2710944241200368 1.5191116879999997 1.3646084067982136 1.0 8.684287843716447 -7.604952012150259 7.05726882555107 1.2570259865772575 1.1703959609956716 0.07768060576081437 0.1685621810583118 0.7273297276577496 52.516194161109766 0.03286117691178459 0.048838589708061146 2.4834074969973327e-08 7.604952012150259 -0.08663002558158595 AT(ph)PEPGDEGEPGR ddPTM_A549_MK2206_60min_R1 2 ATPEPGDEGEPGR 13 0 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 AT(1)PEPGDEGEPGR;AT(1)PEPGDEGEPGR 82.36200000000001 0.00056881 1186100.0 196.31 266.82 176.7 132.09 263.06 300.09 302.72 0.0 316.98 294.79 340.27 True False 229.4423286813015 280.3999983196353 201.75871701798698 164.4520559297454 224.36422247347483 331.8453246163799 357.72030552885104 0.0 245.18453611304614 228.19673425945345 255.77156802575135 0.8970595537741748 1.0962907272453533 0.7888238656677966 0.6429645687326286 0.8772054853684347 1.2974285108302943 1.398592925281028 0.0 0.9586074715245938 0.8921896050481982 1.0 7.998712090632207 -5.742080815757578 24.9585167178268 0.9247695063161041 0.9966749541055827 0.000622430466368562 0.3498639024767858 1786.3563194940405 2303068.260618535 0.04623862610371206 0.1785383367328121 1.8110030604703623e-06 5.742080815757578 0.0719054477894786 AT(ph)PEPGDEGEPGR ddPTM_A549_PD325901_60min_R1 2 ATPEPGDEGEPGR 13 0 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 AT(1)PEPGDEGEPGR;AT(1)PEPGDEGEPGR 75.479 0.0011304 3347000.0 835.01 732.21 774.19 686.95 911.69 998.8900000000001 957.6200000000001 760.14 711.3 761.03 788.29 True False 919.7796004981275 793.9159063912183 826.7311889826652 729.3813413233545 847.656039559756 990.7553710209237 994.0627531297708 744.9784113817057 681.4065346123801 712.9784359218075 691.3353273820258 1.3304391719445077 1.1483803516849753 1.1958468723323623 1.0550326483175723 1.2261141677363592 1.4331039247954431 1.437887973834817 1.077593436752057 0.985638238961049 1.0313062383514244 1.0 9.433241839326415 -8.484928944546857 8.281238302711403 0.9951152002289209 1.252167083964313 0.5329538536716388 0.10798838671578607 0.18837643572581303 38.12355623523549 0.018970651163483027 0.022775857013818873 3.2739425587310497e-09 8.484928944546857 0.25705188373539223 AT(ph)PGSSR ddPTM_A549_MK2206_60min_R1 2 ATPGSSR 7 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 AT(0.874)PGS(0.119)S(0.006)R;AT(0.845)PGS(0.118)S(0.037)R 61.582 0.029591000000000003 16712300.0 4717.0 4238.0 2670.4 2743.6000000000004 3298.0 2377.2 1807.65 2568.8999999999996 2320.3 5909.1 5938.1 True False 5513.11428042229 4453.696098038433 3049.1028745038634 3415.7821231648836 2812.868568834184 2628.753726142351 2136.0766063994047 2933.0494419263014 1794.7557547577164 4574.230205951815 4463.505886777303 1.2351533570851443 0.9978022234118855 0.6831183719364033 0.7652688737980164 0.6301926423278683 0.5889437121455973 0.47856475617682537 0.6571178612344103 0.40209552766010764 1.0248065807423985 1.0 12.123961613318587 -5.5264561290425664 1.9715804107858121 0.6769235175320869 1.2762118211571618 0.4683412504405804 0.1811586121759457 0.3650325844432142 2.1723748353896544 0.031070147431495252 0.32427280888711296 2.9753898074999416e-06 5.5264561290425664 0.5992883036250749 AT(ph)PPPSPLLSELLK ddPTM_A549_MK2206_60min_R1 2 ATPPPSPLLSELLK 14 0 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128 H7C179 BRD8 Bromodomain-containing protein 8 1 AT(1)PPPSPLLSELLK;AT(0.998)PPPS(0.002)PLLSELLK 171.26 1.4892e-22 20156000.0 3679.8 4064.0 3504.6 2926.3 5301.9 3753.5 3919.3 4331.5 5501.2 5342.9 4992.7 True False 4300.860277527651 4270.840241252521 4001.604978275255 3643.2436313665976 4521.997533384458 4150.692878628349 4631.386077759068 4945.503389662411 4255.186983611234 4135.935179194794 3752.874798489928 1.1460175221561402 1.1380183114478029 1.0662772389543638 0.9707874168444299 1.2049422845664894 1.1060035576722393 1.234090217883803 1.3177906685435843 1.1338473069561033 1.102071185763778 1.0 11.87378044522786 -10.319291225374052 1.044077667516124 1.0108455040244495 1.1438217328964675 0.11376996243077131 0.08962754589729402 0.500596916175102 1.0720193463892043 0.03939863147954419 0.01666941214258622 4.7941186103570455e-11 10.319291225374052 0.132976228872018 AT(ph)PPPSPLLSELLK ddPTM_A549_PD325901_60min_R1 2 ATPPPSPLLSELLK 14 0 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128 H7C179 BRD8 Bromodomain-containing protein 8 1 AT(0.997)PPPS(0.003)PLLSELLK;AT(0.997)PPPS(0.003)PLLSELLK 86.46700000000001 8.0116e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AT(ph)PSENLVPSSAR ddPTM_A549_MK2206_60min_R1 1 ATPSENLVPSSAR 13 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 AT(0.917)PS(0.083)ENLVPSSAR 54.898 0.020033000000000002 5735800.0 1580.3 2507.0 1985.7 1958.7 2473.5 2503.0 1911.9 2140.0 2408.1 3216.4 3070.5 True False 1847.016005374464 2634.5955917372225 2267.302118747124 2438.581587929383 2109.6514266256377 2767.865798643069 2259.2674819655454 2443.35155347514 1862.6691949455053 2489.8130061131837 2308.010108511092 0.8002633951053111 1.1415008894552947 0.9823623000549904 1.0565731835128416 0.9140564067921625 1.1992433605191757 0.9788811035247196 1.0586398839697273 0.8070455099293833 1.07877040786419 1.0 11.172433827305312 -8.738556182329567 24.988220532342787 0.9088825778850724 1.0222393017133948 0.0 0.12061946913636876 297.7375172936606 325126.3171952999 0.01885309406547129 0.021370441796941222 1.8257605450244208e-09 8.738556182329567 0.1133567238283224 AT(ph)PTKAPAPVVLGS(ph)PVVLGPPVGQAR ddPTM_A549_MK2206_60min_R1 1 ATPTKAPAPVVLGSPVVLGPPVGQAR 26 1 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 2 AT(0.981)PT(0.039)KAPAPVVLGS(0.979)PVVLGPPVGQAR 44.021 0.023634 1142000.0 677.05 518.44 622.25 395.04 772.56 566.67 744.23 484.36 737.51 691.52 598.4 True False 791.3194877167501 544.8263815637198 710.4944067031261 491.82481773401935 658.9174474040433 626.6346432748973 879.4469575308426 553.0195132902891 570.465162561463 535.305151718502 449.8007650001748 1.7592666560192325 1.2112615716949882 1.5795758077531281 1.0934281486467197 1.4649095748064973 1.39313823371255 1.9551922227844607 1.2294765956880356 1.2682618771474106 1.19009391128602 1.0 8.813142304561019 -9.41356835193936 0.8588277792224536 1.0496323952102975 1.4574536750517761 0.26036849330856926 0.23878500234515057 0.4124183252313732 0.6496277736944218 0.06907499683623128 0.04950662367444366 3.858616775290808e-10 9.41356835193936 0.40782127984147865 AT(ph)PTKAPAPVVLGSPVVLGPPVGQAR ddPTM_A549_MK2206_60min_R1 2 ATPTKAPAPVVLGSPVVLGPPVGQAR 26 1 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 1 AT(0.771)PT(0.228)KAPAPVVLGS(0.001)PVVLGPPVGQAR;AT(0.985)PT(0.015)KAPAPVVLGSPVVLGPPVGQAR 118.93 1.5717e-17 25788000.0 3823.9 4348.0 4345.6 3971.5 6415.700000000001 4262.4 4231.1 4813.1 7076.900000000001 5684.0 5953.1 True False 4469.2808346209 4569.294628190442 4961.871424297476 4944.517678287408 5471.9590288264 4713.4443388478685 4999.836101754496 5495.371664500556 5473.9934494870795 4399.980452290555 4474.780972798367 0.9987708586831622 1.0211214036992229 1.108852356005818 1.1049742341233038 1.222843992161796 1.053335206236977 1.1173364980650167 1.2280761221401075 1.2232986335561002 0.983283981727259 1.0 12.127601353141582 -5.741077053767668 2.972756874744998 1.1215601212053132 1.0009921697626596 0.2063766207359563 0.08023893982169969 0.33484013442940824 5.852714831332411 0.012806608699823252 0.05899775682660358 1.8151935773711966e-06 5.741077053767668 -0.12056795144265364 AT(ph)PTKAPAPVVLGSPVVLGPPVGQAR ddPTM_A549_PD325901_60min_R1 2 ATPTKAPAPVVLGSPVVLGPPVGQAR 26 1 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 1 AT(0.777)PT(0.223)KAPAPVVLGSPVVLGPPVGQAR;AT(0.932)PT(0.068)KAPAPVVLGSPVVLGPPVGQAR 137.25 1.1744000000000002e-24 38350000.0 5079.1 4945.3 5395.6 5225.0 5922.9 5460.299999999999 6390.0 5801.2 5749.8 5668.6 6210.9 True False 5594.726492964198 5362.057786531856 5761.777862378573 5547.736383164024 5506.895936895745 5415.833127156695 6633.1749467421705 5685.49051504664 5508.155901468111 5310.68362859067 5446.998674138989 1.027120957368061 0.9844059283490537 1.057789473996768 1.018494168082565 1.0109963791695293 0.9942784001159646 1.2177669471877888 1.0437840827903908 1.0112276927144266 0.9749742833249603 1.0 12.411245800672216 -8.796954956185163 5.279274152022987 1.0050616075959202 1.0449561841547805 0.11206261745978607 0.059829674899621064 0.3734751317949388 25.440643752273232 0.010439468807363598 0.011210868754474499 1.5960446759638172e-09 8.796954956185163 0.039894576558860306 AT(ph)QASKSTQLK ddPTM_A549_PD325901_60min_R1 1 ATQASKSTQLK 11 1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 AT(0.431)QAS(0.311)KS(0.252)T(0.006)QLK 48.625 0.01185 11358000.0 2056.0 2126.1 1711.3 1986.1 2099.9 2670.8 2299.3 2418.9 2513.2 1959.6 2469.4 True False 2264.7236064527974 2305.2739085485982 1827.439108882877 2108.776886239632 1952.4102682617242 2649.0498903009197 2386.8011197252395 2370.6531419096605 2407.578943888421 1835.8705215725706 2165.6794548163407 1.0457335232211713 1.0644575786235622 0.843817908887099 0.973725304338017 0.9015231981444352 1.2231957432156417 1.102102674713535 1.0946463645104407 1.1116968111481642 0.8477111040092776 1.0 11.080604008139717 -7.221682709174867 24.999787570409453 1.0722318645934636 0.9649874158047782 0.17873026471516062 0.10294290481407987 553.885020927383 348294.1407631717 0.01241706436260073 0.02150686892957524 6.002294372039236e-08 7.221682709174867 -0.10724444878868544 AT(ph)SNVFAMFDQSQIQEFK ddPTM_A549_PD325901_60min_R1 1 ATSNVFAMFDQSQIQEFK 18 0 J3QRS3;P19105;O14950;P24844;P24844-2;J3KTJ1 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 1 AT(0.49)S(0.49)NVFAMFDQS(0.019)QIQEFK 46.178000000000004 0.0071634 1980400.0 1358.7 1030.1 1329.9 1326.6 1139.0 1534.0 1397.3 1341.9 1174.1 1499.4 1633.9 True False 1496.6342237779256 1116.910142136264 1420.1550113383612 1408.5410690728027 1059.0005693366843 1521.5076125960788 1450.4750161318993 1315.1347517998156 1124.7566600427322 1404.7276281107945 1432.940658145469 1.04444954874467 0.7794531725980783 0.9910773368496257 0.9829723659985721 0.7390400735137609 1.061807831292354 1.012236625352737 0.9177873098400884 0.7849289875677109 0.9803110967126942 1.0 10.484763149689963 -11.30920820649422 1.8941813395193887 1.0004013913669882 0.8993111437725708 0.013561472771830618 0.10845007930112513 0.692948353954657 4.491269168428492 0.08431746521266789 0.01651631018459582 4.906725848569684e-12 11.30920820649422 -0.10109024759441743 AT(ph)SPESTSR ddPTM_A549_PD325901_60min_R1 1 ATSPESTSR 9 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 AT(0.599)S(0.401)PESTSR 76.282 0.002125 4864700.0 917.12 1059.8 1116.7 1077.5 1111.3 1027.0 599.22 782.97 1200.5 1103.5 1129.8 True False 1010.2253472519401 1149.113065368423 1192.4859772626126 1144.0547278199501 1033.2461217768723 1018.6364525007646 622.0236450057661 767.3530491219175 1150.047159851206 1033.8248216755119 990.8417623922822 1.0195627451277975 1.1597341866112016 1.2035079893922536 1.1546290954246332 1.0427962980508707 1.028051593264877 0.6277729387424648 0.7744456059958807 1.1606769148229474 1.0433803468067915 1.0 9.952510866924296 -6.866733596161894 4.057051104086179 1.0129557332069936 1.141087215568088 0.192424346594382 0.15007600158652168 0.42213850561327587 12.817534264693458 0.025634383527245952 0.050342496376635106 1.3591469154404445e-07 6.866733596161894 0.1281314823610944 AT(ph)SPLCTSTASMVSSSPSTPSNIPQKPSQPAAK ddPTM_A549_MK2206_60min_R1 2 ATSPLCTSTASMVSSSPSTPSNIPQKPSQPAAK 33 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 AT(0.416)S(0.395)PLCT(0.057)S(0.057)T(0.057)AS(0.01)MVS(0.002)S(0.002)S(0.002)PSTPSNIPQKPSQPAAK;AT(0.465)S(0.465)PLCT(0.06)S(0.008)T(0.001)AS(0.001)MVSSSPSTPSNIPQKPSQPAAK 74.806 1.0748e-05 8948200.0 1199.43 1545.08 2186.0699999999997 1864.84 2344.29 2334.05 2095.68 1726.4 2576.74 2301.96 3239.5 True False 1401.8644607519416 1623.7179724297362 2496.087597688234 2321.7258837158483 1999.4480464621834 2581.037621783001 2476.437929078694 1971.1224868782615 1993.1125042082476 1781.9456372193465 2435.0427443483745 0.5757042516011706 0.6668129240023869 1.0250693148945913 0.953464118485998 0.8211141472168457 1.0599557760427303 1.0169997774480124 0.8094816780745014 0.8185123274875452 0.731792343832634 1.0 11.249731382028504 -5.642036403311815 5.300163667138444 0.9239060095478916 0.5985827803015494 0.5503274119750343 0.10320423228819442 0.09688968442983975 3.9922131550512288 0.013278756222461913 0.05424136321500992 2.280150937809348e-06 5.642036403311815 -0.32532322924634216 AT(ph)SPLCTSTASMVSSSPSTPSNIPQKPSQPAAK ddPTM_A549_PD325901_60min_R1 1 ATSPLCTSTASMVSSSPSTPSNIPQKPSQPAAK 33 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 AT(0.525)S(0.463)PLCT(0.012)STASMVSSSPSTPSNIPQKPSQPAAK 111.79 7.9369e-15 9225800.0 740.88 707.3 855.66 1133.4 1165.0 803.29 918.59 1195.5 1217.3 1256.4 1180.5 True False 816.0935921929705 766.9066532695657 913.7302331015734 1203.4075438618388 1083.174419031816 796.748272569951 953.5474451217356 1171.654814648393 1166.1411142747795 1177.070689581434 1035.305983806063 0.788263184950203 0.7407536180272143 0.8825702230971905 1.162368964040746 1.046236026811876 0.7695775790273038 0.9210295893550609 1.1316990657593566 1.126373393484824 1.1369302486345203 1.0 10.015841502704918 -6.022013113876191 4.851070757904677 1.03988613881891 0.7714347169059419 0.4930152857927883 0.10901661608785408 0.11920487818891246 7.508802580915053 0.016072951400998025 0.047451911709356566 9.505760898023757e-07 6.022013113876191 -0.2684514219129681 AT(ph)SPLVSLYPALECR ddPTM_A549_PD325901_60min_R1 1 ATSPLVSLYPALECR 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AT(0.597)S(0.402)PLVSLYPALECR 211.51 2.1363e-45 5340300.0 4133.0 4651.3 5045.5 4277.8 5220.0 4948.9 4897.2 5754.3 4773.3 5095.8 4787.8 True False 4552.57911744621 5043.281374738767 5387.917971056247 4542.029990411305 4853.365208022383 4908.597799202564 5083.565625850668 5639.525972338977 4572.6948005978875 4774.050318345334 4198.930952364819 1.0842233818782416 1.2010869985605297 1.283164222555695 1.0817110454872458 1.1558573510928989 1.1690113161870554 1.2106809289130194 1.3430861417625413 1.089014049641032 1.1369680455585034 1.0 12.03580634921037 -8.970391647068992 8.603004965156906 1.0389734053211426 1.1913129138222052 0.2888932264677798 0.0788124855830424 0.14544506865528434 35.98669857965021 0.013342953498330798 0.013901706365268532 1.0705534439477584e-09 8.970391647068992 0.1523395085010626 AT(ph)STS(ph)PNSQSSK ddPTM_A549_PD325901_60min_R1 1 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 2 AT(0.452)S(0.452)T(0.155)S(0.941)PNSQSSK 59.11600000000001 0.0024694 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AT(ph)TPADGEEPAPEAEALAAAR ddPTM_A549_MK2206_60min_R1 1 ATTPADGEEPAPEAEALAAAR 21 0 Q5JZ02;Q96S44 Q5JZ02 TP53RK TP53-regulating kinase 1 AT(0.5)T(0.5)PADGEEPAPEAEALAAAR 59.003 0.0032457999999999996 11756000.0 225.84 219.46 304.13 350.93 535.79 303.04 310.38 315.95 616.36 386.86 603.35 True False 263.9562707421179 230.6295766105508 347.2602071685366 436.9078657538463 456.97600075672113 335.10749165832806 366.77202837620507 360.73688005629464 476.75544412466706 299.4680573140613 453.52154338712506 0.5820148449195177 0.5085305868561262 0.7656972689213928 0.9633673904238385 1.0076169642213608 0.7389009332513251 0.8087201892041747 0.7954128868104737 1.0512299825142146 0.6603171595278242 1.0 8.825027273713873 -4.775264344670813 0.32257069035746155 1.0191396229880323 3.1053483211314444e-18 0.17428708568879592 0.15722033470016164 4.765555656238349 0.27180013784450835 0.041697504184099586 2.017940156359077 1.677782481166891e-05 4.775264344670813 -1.0191396229880323 AT(ph)TPASTANSDVATIPTDTPLKEENEGFVK ddPTM_A549_MK2206_60min_R1 1 ATTPASTANSDVATIPTDTPLKEENEGFVK 30 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 AT(0.399)T(0.38)PAS(0.069)T(0.069)ANS(0.069)DVAT(0.014)IPTDTPLKEENEGFVK 44.318999999999996 0.014113999999999998 3022800.0 940.28 1057.8 863.33 555.73 1414.9 968.75 760.21 868.61 1086.3 1461.2 1707.7 True False 1098.9762763611343 1111.6375017708956 985.7631757959182 691.8838749476677 1206.770084306696 1071.262481995794 898.3303166823728 991.7381275065613 840.2547844646406 1131.113905152526 1283.6309598776713 0.8561465956429296 0.8660101980376302 0.7679490496940494 0.539005287792064 0.9401222952909299 0.8345564383223384 0.6998353457975045 0.7726037767124851 0.6545921769795238 0.8811830974069993 1.0 10.326014776156157 -10.969617793260548 1.237240908439911 0.999995496601214 0.7596892596663556 0.23832088355812986 0.11039044916789931 0.3779340899278727 1.0288898603790158 0.07646388985879646 0.017675554995946995 1.0724627253852528e-11 10.969617793260548 -0.24030623693485842 AT(ph)TPLYHGFK ddPTM_A549_MK2206_60min_R1 1 ATTPLYHGFK 10 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AT(0.5)T(0.5)PLY(0.001)HGFK 52.928000000000004 0.014675 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AT(ph)TPQLTDVSEDLDQQSLPSEPEETLSR ddPTM_A549_MK2206_60min_R1 1 ATTPQLTDVSEDLDQQSLPSEPEETLSR 28 0 Q8NC44;H7C3D5;C9JIF3 Q8NC44 FAM134A Protein FAM134A 1 AT(0.498)T(0.498)PQLT(0.003)DVS(0.001)EDLDQQSLPSEPEETLSR 79.395 4.5489e-06 12342000.0 603.96 584.0 505.19 359.82 539.65 460.64 818.56 730.81 1001.2 738.66 798.37 True False 705.8936825956848 613.7231055343193 576.833538485098 447.97591615293334 460.26819987003245 509.3846190519151 967.2817563877384 834.40455551176 774.429798587866 571.79619297835 600.1126951089398 1.176268538141061 1.0226797575460536 0.9612086916114716 0.7464863179933418 0.7669696102437542 0.8488149362670047 1.6118335177231096 1.3904131045924444 1.2904739474762854 0.9528146923713229 1.0 9.229089639509153 AT(ph)TPQLTDVSEDLDQQSLPSEPEETLSR ddPTM_A549_PD325901_60min_R1 1 ATTPQLTDVSEDLDQQSLPSEPEETLSR 28 0 Q8NC44;H7C3D5;C9JIF3 Q8NC44 FAM134A Protein FAM134A 1 AT(0.538)T(0.46)PQLT(0.002)DVSEDLDQQSLPSEPEETLSR 94.275 9.9341e-10 11899000.0 881.62 687.22 880.18 1052.2 1248.8 788.81 774.77 928.12 1106.4 757.09 836.14 True False 971.1214133856588 745.1344411987994 939.9143077523113 1117.1920042804184 1161.0885961261213 782.3861928891222 804.2542963204118 909.607918503945 1059.9018556096407 709.2872081942126 733.300080728167 1.3243165232183463 1.0161384960695503 1.2817594494452753 1.5235127250648148 1.5833744283420237 1.0669386427889285 1.0967601360711527 1.2404306809849308 1.4453862524563725 0.9672536889534914 1.0 9.518259887977775 -7.30790987236496 24.999959338800412 1.1993027690742468 1.3338184240217479 0.19799607502757355 0.18728574359417555 876.7638584156402 471675.29621105245 0.03288435942954781 0.052569364418093206 4.9214165754435024e-08 7.30790987236496 0.13451565494750106 ATAGDTHLGGEDFDNR ddPTM_A549_MK2206_60min_R1 2 ATAGDTHLGGEDFDNR 16 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931;P17066;P48741 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ; 122.12 8.0941e-08 30701000.0 3008.8999999999996 3001.4 2896.4 2425.5 3309.1 2711.0 2355.5 2957.0 3984.9 3601.8 3920.0 False True 3516.7287594578365 3154.1584399840835 3307.1530728403955 3019.7476088848325 2822.335773538263 2997.8762205838434 2783.463859914138 3376.1638054327045 3082.3265125776925 2788.1508784412604 2946.555813503821 1.193504885718085 1.070456030572656 1.122379239410293 1.0248397790551191 0.9578422918730173 1.0174170829701665 0.9446499696892738 1.14580005237302 1.0460777625360584 0.9462406466775196 1.0 11.524813878563316 -5.276180580801871 0.9657559078279333 1.0218066077208974 1.2641923711888592 0.4450046725112029 0.05917482346283875 1.3587839549237661 0.9684371432221794 0.008185250795159759 0.34063066393462405 5.294432542023775e-06 5.276180580801871 0.2423857634679618 ATAGDTHLGGEDFDNR ddPTM_A549_PD325901_60min_R1 2 ATAGDTHLGGEDFDNR 16 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931;P17066;P48741 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ; 150.37 1.0164e-14 45272000.0 6628.1 6496.1 6279.9 6269.3 7566.5 7175.799999999999 6883.9 7262.4 6737.8 7794.700000000001 7531.5 False True 7300.979832650673 7043.549145064935 6706.091778106454 6656.540422386644 7035.055143007923 7117.362663928908 7145.870581514621 7117.545734757411 6454.633697330662 7302.541311748175 6605.173246112125 1.1053426701484488 1.0663685693953362 1.0152787108277184 1.0077768098368585 1.0650826073561102 1.0775436765596214 1.0818596750237788 1.0775713928392225 0.977208841740817 1.1055790725923091 1.0 12.689380686865295 -8.764088774455605 24.99959496443723 0.9892375052717658 1.0601460816444481 0.0 0.044451326345590424 38.1941582689102 360397.0025675609 0.005139321079421301 0.005595125728222802 1.721516642530271e-09 8.764088774455605 0.07090857637268233 ATAPQT(ph)QHVSPMR ddPTM_A549_MK2206_60min_R1 1 ATAPQTQHVSPMR 13 0 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06 P29692 EEF1D Elongation factor 1-delta 1 ATAPQT(0.784)QHVS(0.216)PMR 59.155 0.004704600000000001 17883000.0 1933.4 1661.7 1633.7 1272.2 2196.4 1768.8 1813.7 1441.0 2768.4 3059.1 2338.0 True False 2259.7106529082994 1746.2734323054422 1865.3832257627917 1583.8890571112277 1873.312469553486 1955.9732419655845 2143.2258130869345 1645.2661628774192 2141.3618202263765 2368.0471853627787 1757.4100744826349 1.2858186519577892 0.9936630372507275 1.0614387915762593 0.9012632168832364 1.065950683197814 1.1129862462757332 1.2195365465387356 0.9361879658973562 1.2184758988915967 1.34746421438372 1.0 10.779235154092401 -7.0111700244047634 24.016382433401212 1.10146720332813 1.0468042128169894 0.033304234194224236 0.13725877391248067 964.0111104795409 2072706.7877076063 0.017825493802081694 0.03212109519227762 9.7460800821384e-08 7.0111700244047634 -0.05466299051114065 ATAPQT(ph)QHVSPMR ddPTM_A549_PD325901_60min_R1 2 ATAPQTQHVSPMR 13 0 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06 P29692 EEF1D Elongation factor 1-delta 1 AT(0.014)APQT(0.944)QHVS(0.043)PMR;AT(0.001)APQT(0.5)QHVS(0.5)PMR 46.063 0.019488 17589800.0 4245.35 4884.69 4066.71 4373.71 4662.55 4460.96 4745.0599999999995 5117.59 4940.48 5321.88 5748.96 True False 4676.334806738513 5296.339969121046 4342.701395713836 4643.864133283894 4335.068572924285 4424.631420786575 4925.635854896465 5015.51565277831 4732.848806581996 4985.855588562279 5041.8743656600645 0.9274992726095633 1.0504704371838642 0.8613267766630089 0.9210590737668918 0.859812890707909 0.8775766907090153 0.9769453773867723 0.9947720409177027 0.9387081992397857 0.988889295322524 1.0 12.299744453969724 -7.788518883005774 24.7959329774565 0.9728789184073445 0.9175411132820327 0.27404494490993603 0.050924964791454266 246.603639656669 225806.97669871643 0.008347037347243362 0.011534717662409091 1.627350557345016e-08 7.788518883005774 -0.055337805125311834 ATAPQTQHVS(ph)PMR ddPTM_A549_MK2206_60min_R1 19 ATAPQTQHVSPMR 13 0 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06 P29692 EEF1D Elongation factor 1-delta 1 ATAPQT(0.005)QHVS(0.995)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQT(0.012)QHVS(0.987)PMR;ATAPQT(0.002)QHVS(0.998)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.383)QHVS(0.617)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.004)QHVS(0.996)PMR;ATAPQT(0.004)QHVS(0.996)PMR;ATAPQT(0.002)QHVS(0.997)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR 219.12 4.5368999999999995e-38 16984822200.0 47570.240000000005 52408.909999999996 50590.78999999999 46092.22 64752.15 52059.21 49800.63999999999 49088.780000000006 72693.42000000001 74786.07 79609.89 True False 55598.933531294395 55076.29966244626 57765.324750007916 57384.81596915838 55227.194511654445 57568.081048093176 58848.771658074475 56047.2648930838 56228.47643753807 57891.84484581859 59840.55719181118 0.929117911671163 0.9203841382343131 0.9653206363845949 0.9589619258593927 0.9229057532775105 0.9620244822180737 0.9834261982127328 0.936610010388632 0.9396382499799416 0.9674349231116575 1.0 15.868835988166047 -9.098171717754232 0.007122890913000187 1.9245849019930414 3.312134215959713e-07 0.35599205862000805 0.019654440243623204 1619.7326545022684 7.388166367678176 1005.7638365710798 989.9386578330561 7.976792267350355e-10 9.098171717754232 -1.9245845707796199 ATAPQTQHVS(ph)PMR ddPTM_A549_PD325901_60min_R1 19 ATAPQTQHVSPMR 13 0 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06 P29692 EEF1D Elongation factor 1-delta 1 ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.013)QHVS(0.987)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.001)QHVS(0.999)PMR;AT(0.001)APQT(0.033)QHVS(0.966)PMR;ATAPQT(0.002)QHVS(0.998)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.003)QHVS(0.997)PMR;AT(0.123)APQT(0.158)QHVS(0.719)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.002)QHVS(0.998)PMR;ATAPQT(0.003)QHVS(0.996)PMR;AT(0.001)APQT(0.136)QHVS(0.863)PMR 215.04 1.3393e-37 21823099100.0 79281.75000000001 76169.21000000002 75903.04 74824.72999999998 90151.75000000001 82165.66 74816.07999999999 82763.29000000001 84674.68 85593.13 92428.52 True False 87330.37489586053 82588.25664256577 81054.27673645839 79446.48363280852 83819.80208665365 81496.53010689777 77663.24686532983 81112.51125440515 81116.0976637315 80188.76516438495 81060.3979926628 1.0773494463198325 1.0188483980801732 0.9999244852436455 0.9800899773524384 1.03404133414495 1.0053803352196031 0.9580911121650246 1.000642894224959 1.0006871378928308 0.989247118816802 1.0 16.306709638337008 -5.264772500733611 2.238302251072662 0.9987491414471914 1.0972570201801477 0.6394721780418752 0.017570475425659843 0.28590842820872286 1.6346910353024589 0.002306578771214678 0.05531891205431479 5.435349803491597e-06 5.264772500733611 0.0985078787329563 ATAPQTQHVS(ph)PMRQVEPPAK ddPTM_A549_MK2206_60min_R1 8 ATAPQTQHVSPMRQVEPPAK 20 1 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06 P29692 EEF1D Elongation factor 1-delta 1 ATAPQT(0.001)QHVS(0.999)PMRQVEPPAK;ATAPQT(0.008)QHVS(0.992)PMRQVEPPAK;ATAPQT(0.002)QHVS(0.998)PMRQVEPPAK;ATAPQT(0.012)QHVS(0.988)PMRQVEPPAK;ATAPQTQHVS(1)PMRQVEPPAK;ATAPQT(0.005)QHVS(0.995)PMRQVEPPAK;ATAPQTQHVS(1)PMRQVEPPAK;ATAPQT(0.005)QHVS(0.995)PMRQVEPPAK 168.92 1.1901e-34 333879000.0 35532.600000000006 44088.3 43744.1 37778.4 55672.0 36403.9 35312.6 33258.799999999996 65887.0 66694.5 71385.2 True False 41529.63419133622 46332.20615364508 49947.67115510198 47034.109695936844 47482.722548252474 40256.13653504693 41728.442326301854 37973.33675080325 50963.69969991876 51628.16612865802 53658.28470870739 0.7739649975169073 0.8634678951287186 0.9308473318938713 0.876548886183542 0.8849094376762144 0.7502315206977603 0.7776700756058715 0.7076882341086304 0.9497824982029035 0.9621657943210411 1.0 15.711513316335836 -8.930921204641871 8.975811915866258 0.9779525708384225 0.8258924088954668 0.5296803774448462 0.06320232571304311 0.17902590402551355 21.427761124074724 0.011927500459711289 0.012660688203779486 1.1724080597841393e-09 8.930921204641871 -0.15206016194295568 ATAPQTQHVS(ph)PMRQVEPPAK ddPTM_A549_PD325901_60min_R1 8 ATAPQTQHVSPMRQVEPPAK 20 1 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06 P29692 EEF1D Elongation factor 1-delta 1 ATAPQT(0.001)QHVS(0.999)PMRQVEPPAK;ATAPQT(0.005)QHVS(0.995)PMRQVEPPAK;ATAPQT(0.001)QHVS(0.999)PMRQVEPPAK;ATAPQTQHVS(1)PMRQVEPPAK;ATAPQTQHVS(1)PMRQVEPPAK;ATAPQTQHVS(1)PMRQVEPPAK;ATAPQT(0.001)QHVS(0.999)PMRQVEPPAK;ATAPQTQHVS(1)PMRQVEPPAK 202.44 2.0969999999999997e-55 584218000.0 42298.0 44127.4 56737.799999999996 57287.299999999996 57811.8 79109.4 64853.200000000004 70675.4 69155.1 65749.09999999999 73473.5 True False 46592.06182185815 47846.17086312375 60588.368300108064 60825.80641210189 53751.29860788281 78465.15927503805 67321.22401503273 69265.72370322114 66248.7516403383 61597.69060518843 64436.725286891015 0.7230668786226606 0.7425295225680495 0.9402769620950018 0.9439617879600141 0.8341717920730207 1.2177086735194622 1.0447648249550094 1.074941710566917 1.0281210186485987 0.9559407361397964 1.0 15.975595556827802 -5.798147633922687 0.8593667129425703 1.0280321335786073 0.6440168453100161 0.6140395719676859 0.08639046464318766 0.5737786080547489 0.4940273844859037 0.012826421303919675 0.1734856744643609 1.5916675641291471e-06 5.798147633922687 -0.3840152882685912 ATAPQTQHVSPMR ddPTM_A549_MK2206_60min_R1 2 ATAPQTQHVSPMR 13 0 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06 P29692 EEF1D Elongation factor 1-delta 0 ; 54.276 0.0021914 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ATAS(ph)SPTQQDGR ddPTM_A549_PD325901_60min_R1 1 ATASSPTQQDGR 12 0 Q9BV73;Q9BV73-2 Q9BV73 CEP250 Centrosome-associated protein CEP250 1 AT(0.007)AS(0.543)S(0.45)PT(0.001)QQDGR 57.836000000000006 0.013394 10174000.0 486.84 197.77 239.52 280.32 393.13 216.96 191.85 342.55 388.55 331.56 414.65 True False 536.2636384073344 214.4367719738754 255.77526755076642 297.6347297470889 365.5179050248734 215.19314969285878 199.1509567343482 335.71757152472367 372.2205947190223 310.62524501561643 363.65067868291754 1.4746669533234267 0.5896779094446623 0.7033542972534577 0.8184632868693454 1.0051346703070063 0.591757866291499 0.5476435722755694 0.9231869791653822 1.0235663413777847 0.8541857975919351 1.0 8.50640945858529 -8.515728257352919 22.357764629586885 1.0091416788160719 0.7989755136692279 0.048563816497704804 0.24914381779854336 119.40044027622449 373336.7422722037 0.03837785675215027 0.044444462572793844 3.04980268650487e-09 8.515728257352919 -0.21016616514684394 ATASGIMGS(ph)PKPAIK ddPTM_A549_MK2206_60min_R1 2 ATASGIMGSPKPAIK 15 1 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 AT(0.097)AS(0.085)GIMGS(0.818)PKPAIK;AT(0.006)AS(0.056)GIMGS(0.938)PKPAIK 41.348 0.021230000000000002 19491900.0 6939.8 7008.9 7643.4 6180.0 9328.4 8342.5 7289.0 7727.5 10227.8 10032.0 10530.7 True False 8111.068578179907 7365.623072567614 8727.349052944435 7694.100277430739 7956.204717256755 9225.29781269669 8613.316949655773 8822.896789476237 7911.2196304404415 7765.7642324734115 7915.636557465477 1.024689362541552 0.9305155711856011 1.1025454478090466 0.9720128282259497 1.0051250660002848 1.1654524239110033 1.088139518170815 1.114616206217186 0.9994419997693211 0.9810662953125713 1.0 12.950489657939459 -4.79992802369761 16.390906543922817 1.02315573509776 3.938842253129048 0.0 0.06976058808518627 13431.982834685099 1191438.877768169 0.009460299533059153 122194.3041419555 1.585155881051106e-05 4.79992802369761 2.915686518031288 ATASGIMGS(ph)PKPAIK ddPTM_A549_PD325901_60min_R1 1 ATASGIMGSPKPAIK 15 1 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 AT(0.001)AS(0.004)GIMGS(0.996)PKPAIK 56.817 0.0026186 13992000.0 5723.1 5495.0 6215.0 5585.2 6844.1 6396.4 5781.2 6101.4 6731.7 6165.2 6887.4 True False 6304.104898876456 5958.082934704177 6636.787273831053 5930.185119090475 6363.394026863217 6344.309839119663 6001.206729594028 5979.702790544294 6448.790059117337 5775.928219840387 6040.29346282582 1.0436752680435526 0.9863896466905795 1.0987524554355306 0.9817710274487503 1.0534908719296299 1.0503313917055308 0.9935290009546148 0.989968919117188 1.0676286009621145 0.9562330465212604 1.0 12.560402928099627 -11.244899475836139 1.7364128872291698 0.9999602428221791 1.0345148732268379 0.15177439627873934 0.03900742081134134 0.6868765197655353 3.7337133302456684 0.02646726576125283 0.0053940660179842646 5.689846158781324e-12 11.244899475836139 0.03455463040465878 ATASS(ph)PTQQDGR ddPTM_A549_PD325901_60min_R1 1 ATASSPTQQDGR 12 0 Q9BV73;Q9BV73-2 Q9BV73 CEP250 Centrosome-associated protein CEP250 1 ATAS(0.012)S(0.986)PT(0.001)QQDGR 96.64 0.00025591 9123900.0 474.2 387.02 454.3 362.73 383.92 360.1 321.55 436.39 411.02 317.65 529.67 True False 522.3404349124104 419.63553364680797 485.1315299278275 385.1350082803997 356.9547836520982 357.1674649907744 333.7867612089116 427.6858591086678 393.74625876055194 297.5935247895118 464.5239478547713 1.1244639535262773 0.9033668459607658 1.0443627980176793 0.8290961317688798 0.7684313915365597 0.7688892394896274 0.718556627167189 0.9206971160125839 0.8476339284097636 0.6406419435721996 1.0 8.859609164339014 -4.366724955295236 1.046404427481871 0.8877905733397502 2.1795485292932533 0.254922428681836 0.12039286894452499 10.283118548356743 2.1884792133048827 0.016575067458873768 23.212076359634 4.298085442862948e-05 4.366724955295236 1.291757955953503 ATAVMPDGQFK ddPTM_A549_MK2206_60min_R1 2 ATAVMPDGQFK 11 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 143.61 7.249299999999999e-11 10351400.0 9364.4 10065.8 10197.8 9922.2 13437.2 10777.0 10178.9 10283.3 15452.400000000001 15042.8 15232.2 False True 10944.881782401202 10578.106225492034 11644.001383169376 12353.139445424491 11460.605680151206 11917.414986806378 12028.274372184263 11740.98926628546 11952.456072412237 11644.621032321666 11449.624352666551 0.9559162331690124 0.9238823824843174 1.0169767168350423 1.0789122040102141 1.0009590993683646 1.0408564176195774 1.0505387776659194 1.0254475522204405 1.04391687484739 1.0170308364404725 1.0 13.483012645693918 -5.811348136201618 6.4544913051073145 1.027333974010573 0.9399913492477666 0.6980027986664661 0.02294420147665158 0.07802381291854389 7.313951049877038 0.003413241127235059 0.011031245258038428 1.5440162394838567e-06 5.811348136201618 -0.0873426247628063 ATAVMPDGQFK ddPTM_A549_PD325901_60min_R1 1 ATAVMPDGQFK 11 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 156.12 9.7801e-13 4014600.0 4293.8 4895.3 4144.1 4433.8 5611.0 4917.5 4891.5 5529.3 5211.5 5301.1 5470.9 False True 4729.703415071506 5307.8441110568465 4425.3435464977065 4707.665756109601 5216.902716899155 4877.453510391927 5077.648709231503 5419.013773848062 4992.4787784794335 4966.387641308614 4798.013982892491 0.9857627409873024 1.1062585748983174 0.9223281887623597 0.981169661633953 1.087304608844457 1.0165567519775225 1.0582813487697327 1.1294285079555353 1.0405302686237086 1.035092365094488 1.0 12.228221646757849 -4.933198864515529 14.581958015232152 1.0291004049577925 0.5775445895242864 0.04650148856484482 0.05650965561609688 1500365.203334619 7867882.745768053 0.007572334863103299 20070908.528820846 1.1662754543630193e-05 4.933198864515529 -0.4515558154335061 ATCAPQHGAPGPGPADASK ddPTM_A549_PD325901_60min_R1 1 ATCAPQHGAPGPGPADASK 19 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 72.421 0.00075762 2632600.0 689.96 798.58 1149.0 1036.3 1149.5 1159.2 816.19 1048.6 1250.7 1090.8 1032.2 False True 760.0042312782936 865.8791392167536 1226.9780494982908 1100.3098973919389 1068.763085559718 1149.7598595315346 847.2505570863059 1027.6848503892134 1198.1374284264086 1021.9267018429069 905.2459436549077 0.8395555225685912 0.9565125867571286 1.3554085031791447 1.2154817208563955 1.1806328358066032 1.270107717787067 0.9359341105308389 1.135254852664638 1.3235490717461367 1.1288939862209197 1.0 9.822165996872963 -5.56760466843509 8.184657031573686 1.1639760944790087 0.8680915620311433 0.44740523680068234 0.11988588664493424 0.16776465548423594 27.309712131230132 0.019543805520947 0.07685163892314813 2.706420856294898e-06 5.56760466843509 -0.2958845324478654 ATCGTVGDDNEEAKRKS(ph)PK ddPTM_A549_MK2206_60min_R1 4 ATCGTVGDDNEEAKRKSPK 19 3 P38432 P38432 COIL Coilin 1 ATCGTVGDDNEEAKRKS(1)PK;ATCGTVGDDNEEAKRKS(1)PK;ATCGTVGDDNEEAKRKS(1)PK;ATCGTVGDDNEEAKRKS(1)PK 98.7 2.0796999999999998e-07 147511000.0 6301.800000000001 7976.93 7492.160000000001 6516.44 9451.400000000001 7134.7 5496.61 4818.36 12552.8 12253.7 12590.5 True False 7365.38977578232 8382.921664777181 8554.660946765604 8112.9680925341045 8061.111580193879 7889.689218369439 6495.2728877277295 5501.377285608631 9709.610842702517 9485.580659435751 9463.93136987751 0.7782590012460804 0.8857758300592664 0.9039225468174887 0.8572513657861732 0.8517719819747819 0.8336587523744431 0.6863186802475509 0.5812993639322888 1.0259595577380214 1.0022875577508041 1.0 13.20822389630509 -8.86350987096095 24.68727597950783 1.0122629370332386 0.8049845526718657 0.5279764748772346 0.08910151267446667 6.043938027921363 1450.3755826707966 0.016440886773129958 0.017502627391970955 1.3692732661985334e-09 8.86350987096095 -0.2072783843613728 ATCGTVGDDNEEAKRKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 ATCGTVGDDNEEAKRKSPK 19 3 P38432 P38432 COIL Coilin 1 ATCGT(0.007)VGDDNEEAKRKS(0.993)PK;ATCGTVGDDNEEAKRKS(1)PK 134.81 1.6746e-17 223250000.0 3243.6 2842.0 3520.7000000000003 3002.6 2992.5 3403.8999999999996 3913.6000000000004 3847.9 2606.84 3312.2 3153.8 True False 3572.8878841878836 3081.505313999867 3759.635873688977 3188.0637826006323 2782.3171235645564 3376.1797669594475 4062.534189604091 3771.1506158808475 2497.283580330294 3103.0671267364123 2765.9025935853974 1.2917620065413813 1.114104784870735 1.3592799263460027 1.1526305336978602 1.00593460160789 1.2206430460672721 1.468791489268568 1.363443031083883 0.902881969206697 1.1219003640739038 1.0 11.433534634850515 -8.770131852643384 24.99980030724829 0.9541386897451628 1.241705091200059 0.3708039737437544 0.13343024490452027 111.66965895833555 321164.2353050513 0.022757045393879655 0.02440829968416632 1.6977281406684772e-09 8.770131852643384 0.2875664014548961 ATDS(ph)FSGR ddPTM_A549_MK2206_60min_R1 2 ATDSFSGR 8 0 Q9HBH9;K7EK27;Q9HBH9-2 Q9HBH9 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 1 AT(0.418)DS(0.581)FS(0.001)GR;AT(0.038)DS(0.962)FS(0.001)GR 83.456 0.0033468000000000005 6523600.0 1056.81 1324.87 743.1800000000001 1190.93 2641.8 1723.4299999999998 1865.88 1857.08 2716.8 2409.0 2182.68 True False 1235.1736914761673 1392.3002240226936 848.5740991139085 1482.7079034628784 2253.1947195712974 1905.8022186797546 2204.8862436580757 2120.3267770689777 2101.4491378381085 1864.8052268768374 1640.66031709656 0.7528515675091274 0.8486218685941135 0.517214983669265 0.9037263155646951 1.3733462655808766 1.1616068230701224 1.343901733150963 1.2923618344236378 1.2808557115326566 1.1366187183566077 1.0 10.680060858329224 -6.551850047890438 6.403950162015881 1.179425787408131 0.7180234526880601 0.7616607748573698 0.12825572029253854 0.07850471515302355 10.346656325659142 0.021885603957021153 0.046526281400965375 2.806402458288894e-07 6.551850047890438 -0.461402334720071 ATDS(ph)FSGR ddPTM_A549_PD325901_60min_R1 2 ATDSFSGR 8 0 Q9HBH9;K7EK27;Q9HBH9-2 Q9HBH9 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 1 AT(0.017)DS(0.982)FSGR;AT(0.406)DS(0.592)FS(0.002)GR 90.15 0.0026425 7872800.0 1966.74 1719.0700000000002 2125.33 2194.97 2316.9900000000002 1875.78 1573.78 1760.1399999999999 2214.44 1964.14 2050.5 True False 2166.4019969625356 1863.942061976689 2269.5676744475213 2330.548311761444 2154.2526155815685 1860.5042695928778 1633.6710591054607 1725.0326268968813 2121.374787722536 1840.12386519777 1798.3014991904558 1.2046934276247827 1.0365014224899343 1.262061826378511 1.2959719562101186 1.197937396232696 1.0345897339408459 0.9084522588903434 0.9592566250283625 1.1796546845328877 1.0232565929718356 1.0 10.812419204803492 -7.254684277728226 23.278423510374065 1.058508104623955 1.1992240916115238 0.4653532419623082 0.09150312096132626 215.83058870599274 743759.654670344 0.016093558835917243 0.0274359744350218 5.563085340322931e-08 7.254684277728226 0.1407159869875687 ATDS(ph)LPGKFEDMYK ddPTM_A549_PD325901_60min_R1 1 ATDSLPGKFEDMYK 14 1 A0A499FJN1;A0A499FIS5;Q9BUB5-2;Q9BUB5;E9PN34;E9PSE0;E9PLE7;E9PMM8;E9PII5;E9PIA0;A0A499FJS1;Q9BUB5-3 A0A499FJN1 MKNK1 MAP kinase-interacting serine/threonine-protein kinase 1 1 AT(0.021)DS(0.979)LPGKFEDMYK 52.861999999999995 0.0047853 4812100.0 3041.4 2601.3 2562.7 3277.5 3510.2 3339.7 3285.9 3278.7 3335.7 3589.6 3564.4 True False 3350.160689039658 2820.5206802631456 2736.62023276699 3479.943731257435 3263.6556615325985 3312.5025904740046 3410.9467226134716 3213.3037564096094 3195.512129209217 3362.9520433950333 3126.001396593248 1.07170799497745 0.9022774856521117 0.8754379431018137 1.113225264406445 1.0440352538195816 1.0596612637742284 1.091153294534916 1.0279278057621806 1.022236308880643 1.0757999171273618 1.0 11.610102707547874 -6.255393918821967 24.999940002850014 1.0291257111243557 0.9450547819775178 0.33036591279510363 0.05867321150495162 478.48507255508446 1978682.3298605506 0.007971042648022314 0.02049756816347736 5.554002631422762e-07 6.255393918821967 -0.08407092914683789 ATDSDLSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ATDSDLSSPR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 ATDSDLS(0.002)S(0.998)PR;ATDSDLS(0.012)S(0.988)PR 157.38 1.3530999999999999e-08 83506000.0 5718.9 5710.9 5078.2 4909.299999999999 6668.9 5683.5 4863.9 5146.4 8308.7 7975.7 8408.1 True False 6684.110506319064 6001.560416773873 5798.36512032112 6112.078720386849 5687.913644238408 6284.924197598038 5747.607670658618 5875.917960188994 6426.792716267479 6173.983830635784 6320.1367182452705 1.0575895434386817 0.949593447788603 0.9174429887856895 0.9670801428618166 0.8999668674600454 0.9944285191575715 0.9094119204836426 0.9297137423034085 1.0168755839908192 0.9768750433534823 1.0 12.625740052020326 -8.768692337294565 24.995313141805372 1.007969029392822 0.9504535127405301 0.16327453110410928 0.043224501404225645 149.40630643242102 514886.43186909816 0.0068854873033189915 0.007404445153021688 1.7033647779972053e-09 8.768692337294565 -0.05751551665229193 ATDSDLSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ATDSDLSSPR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 ATDSDLS(0.012)S(0.988)PR 166.87 9.9615e-10 51278000.0 5511.8 5788.6 5147.4 5346.0 6240.9 6367.0 6202.3 6327.0 6310.3 6385.1 7010.4 True False 6071.353878427295 6276.4256370934645 5496.733517830721 5676.21027835309 5802.560713936187 6315.149262972124 6438.331920528789 6200.803021564522 6045.100035659363 5981.943696312015 6148.165242587056 0.987506620084362 1.0208615724278156 0.8940445321404176 0.9232364541920843 0.9437873715141977 1.027159975992253 1.0471956537426497 1.008561542655499 0.983236428615519 0.9729640405362466 1.0 12.585940225139247 -7.24711573279267 24.65890467742804 1.000057592464468 0.9525806760449796 0.33794888271929124 0.03604650754961488 711.203811010225 1224374.5383186773 0.005543282183583891 0.009570794045771838 5.6608841508969816e-08 7.24711573279267 -0.04747691641948826 ATEDGEEDEEMIES(ph)IENLEDLK ddPTM_A549_PD325901_60min_R1 1 ATEDGEEDEEMIESIENLEDLK 22 0 P49736;H0Y8E6 P49736 MCM2 DNA replication licensing factor MCM2 1 AT(0.001)EDGEEDEEMIES(0.999)IENLEDLK 57.496 0.00020687 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ATEDGEEDEEMIES(ph)IENLEDLKGHSVR ddPTM_A549_MK2206_60min_R1 2 ATEDGEEDEEMIESIENLEDLKGHSVR 27 1 P49736;H0Y8E6 P49736 MCM2 DNA replication licensing factor MCM2 1 ATEDGEEDEEMIES(1)IENLEDLKGHSVR;ATEDGEEDEEMIES(0.999)IENLEDLKGHS(0.001)VR 88.66799999999999 2.9909999999999997e-09 3817700.0 1352.81 1286.19 1192.85 1039.52 1904.73 1512.5300000000002 1398.18 1304.1999999999998 2065.07 1963.09 2088.76 True False 1581.1312549709726 1351.6515772383316 1362.0140667510236 1294.2024466658265 1624.5467401805745 1672.5849206638447 1652.2112076649346 1489.0743439449884 1597.3349422391575 1519.6266055747838 1570.0632451566933 1.0070494038048605 0.8608898917975982 0.8674899377159128 0.8242995628731277 1.0347014651747 1.0652977998328468 1.0523214353062846 0.9484167905582541 1.0173698079784947 0.9678760459252227 1.0 10.616606959470815 -6.772888559159108 24.999998713149946 1.013094334260116 0.8862547266846907 0.5544481505396999 0.052720328791126383 110.34618935302379 240947.99257004884 0.00713228796633999 0.013561831638699427 1.6869858538301368e-07 6.772888559159108 -0.12683960757542523 ATEDGEEDEVS(ph)AGEK ddPTM_A549_MK2206_60min_R1 2 ATEDGEEDEVSAGEK 15 0 Q9BXW9 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 ATEDGEEDEVS(1)AGEK;ATEDGEEDEVS(1)AGEK 186.68 2.0929e-33 6348200.0 3331.0 3272.7 2248.9 2589.99 2194.06 2730.8 2269.9900000000002 3129.1 3332.2000000000003 3028.7 3414.0 True False 3893.1913648689074 3439.2664511680937 2567.8278364558614 3224.5376662690696 1871.3166804537082 3019.771443441667 2682.417799773509 3572.6595074668503 2577.462020429969 2344.514566476496 2566.2095783933773 1.517097978921235 1.3402126155733973 1.0006306024558982 1.2565371485706365 0.729214284059091 1.176743890626521 1.0452839948687613 1.392193193240117 1.0043848492076928 0.9136099351418999 1.0 11.325423282588483 -5.587231834564556 2.6526494983922873 1.040323439266419 1.5136295409212837 0.42999597384347377 0.16801334469928345 0.18507606014297068 2.3836257001390733 0.021511046426483337 0.1397496093438527 2.58683164711475e-06 5.587231834564556 0.47330610165486475 ATEDGEEDEVS(ph)AGEK ddPTM_A549_PD325901_60min_R1 2 ATEDGEEDEVSAGEK 15 0 Q9BXW9 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 ATEDGEEDEVS(1)AGEK;ATEDGEEDEVS(1)AGEK 190.87 9.448e-34 8282700.0 3618.7 3630.6 4369.5 4205.4 3153.6000000000004 2855.4 2383.2 2676.0 2403.82 2998.0 3307.1 True False 3986.0677600538593 3936.5634035918065 4666.04054593802 4465.158006843636 2932.1020153293857 2832.146569104853 2473.89398013708 2622.625080718611 2302.7958049092254 2808.705768358119 2900.3476654341653 1.3743413617474607 1.357272940243364 1.6087866298054792 1.5395250921324384 1.0109484632734425 0.976485199639298 0.8529646323509813 0.9042450710218629 0.7939723338527798 0.9684031338145359 1.0 11.502010131500429 -6.846161595322642 4.385911415485961 0.9043880137305416 1.4721634920640698 0.9005497412624178 0.08660025689961981 0.053905779961462744 1.9112733831321318 0.015078195107464862 0.029537962846549262 1.4250772422511102e-07 6.846161595322642 0.5677754783335283 ATEPPS(ph)PDAGELSLASR ddPTM_A549_MK2206_60min_R1 2 ATEPPSPDAGELSLASR 17 0 Q8IYB8 Q8IYB8 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial 1 ATEPPS(1)PDAGELSLASR;ATEPPS(0.99)PDAGELS(0.01)LASR 147.64 1.8315999999999998e-16 13016500.0 1903.54 2338.9 2353.45 2028.27 2714.0 2305.1000000000004 2257.67 2257.7 3406.6 3618.5 3521.8999999999996 True False 2224.81101491521 2457.940019750376 2687.20459856243 2525.1962410525007 2314.774195214061 2549.024151998458 2667.85941524617 2577.7358889162724 2635.0105392223572 2801.0783368426073 2647.3150305048734 0.8404028191880559 0.9284652530687361 1.0150679339624906 0.9538706999185196 0.8743856203515782 0.9628714839851643 1.0077604608837878 0.973717090415442 0.9953520864949081 1.0580827383843356 1.0 11.37031417042993 -7.5250785157478886 7.157331598489951 0.9958518051004643 0.9285369057279418 0.42216915760905915 0.04607787922366676 0.11046339183796998 35.05206658804985 0.006375087245208112 0.009714593929991857 2.984842942795769e-08 7.5250785157478886 -0.06731489937252255 ATET(ph)SPLTR ddPTM_A549_PD325901_60min_R1 1 ATETSPLTR 9 0 O75037-3;O75037-4;O75037-2;O75037 O75037-3 KIF21B Kinesin-like protein KIF21B 1 AT(0.007)ET(0.535)S(0.458)PLTR 82.008 0.011286 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ATET(ph)TDEDEDGGSEK ddPTM_A549_PD325901_60min_R1 1 ATETTDEDEDGGSEK 15 0 H0Y6H0;Q8NB78;Q8NB78-2 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 AT(0.002)ET(0.561)T(0.437)DEDEDGGSEK 107.61 4.3479e-06 3193400.0 602.24 872.65 758.11 542.37 1038.1 1000.5 838.26 716.33 836.83 856.9 905.77 True False 663.3789614543448 946.1912780654416 809.5599034857695 575.8709630883585 965.1874372505818 992.3522597147177 870.1604430134728 702.0422361999858 801.6609452547148 802.7951877605309 794.3660321491042 0.8351048944774456 1.1911275655954023 1.0191270405855086 0.7249440935060858 1.215041175211548 1.2492380332904909 1.0954149696699793 0.883776757549234 1.0091833145053732 1.0106111732756526 1.0 9.633660122940888 -3.924642126508677 11.396551101600991 1.0174307778811869 0.7020494910383062 0.0 0.1555378946679108 0.0 0.0 0.019198024036299163 0.0 0.0001189481997505713 3.924642126508677 -0.3153812868428807 ATETS(ph)PLTR ddPTM_A549_PD325901_60min_R1 1 ATETSPLTR 9 0 O75037-3;O75037-4;O75037-2;O75037 O75037-3 KIF21B Kinesin-like protein KIF21B 1 AT(0.012)ET(0.218)S(0.77)PLTR 60.943000000000005 0.0078569 11273000.0 403.3 450.13 418.74 551.37 416.84 541.51 323.31 665.08 377.72 610.4 482.7 True False 444.2427191062321 488.0640348313725 447.1582144881763 585.4268726478753 387.56259641993273 537.100122097068 335.6137389720204 651.8144576548334 361.84574195668256 571.8592398284846 423.33096008740927 1.0493981328804889 1.1529136322337425 1.0562851684550716 1.3829058770636489 0.9155073286865409 1.2687475586150556 0.7927928042464056 1.539727823167592 0.854758513013007 1.3508561710450078 1.0 8.725642193033515 ATETT(ph)DEDEDGGSEK ddPTM_A549_PD325901_60min_R1 1 ATETTDEDEDGGSEK 15 0 H0Y6H0;Q8NB78;Q8NB78-2 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 AT(0.005)ET(0.259)T(0.735)DEDEDGGSEK 135.14 1.5223e-09 3476100.0 754.78 915.06 947.46 932.18 1005.4 768.1 799.59 777.97 752.1 869.96 1127.3 True False 831.404709960331 992.1753176033492 1011.7603331398174 989.7586414656155 934.784172441706 761.8448482627438 830.0188350024366 762.4527780443414 720.4918524982025 815.0305771316979 988.6492465434773 0.8409501275271227 1.0035665541365655 1.023376426651961 1.0011221319654233 0.945516497089241 0.7705916440297823 0.8395483412386694 0.7712065534971421 0.7287638715319831 0.824388002096005 1.0 9.94931496149064 -7.07016409439554 7.485235297163582 0.8515928129777601 0.9738471353139442 0.40198946564675564 0.08133576259665155 0.34686520517467767 33.00734315680817 0.016566050770522374 0.028854403474064826 8.50816503840177e-08 7.07016409439554 0.12225432233618405 ATEVSKT(ph)PEAR ddPTM_A549_MK2206_60min_R1 2 ATEVSKTPEAR 11 1 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 ATEVS(0.014)KT(0.986)PEAR;ATEVS(0.045)KT(0.954)PEAR 83.87700000000001 0.00022509 117143000.0 6353.5 6205.4 5832.299999999999 4620.0 7099.1 5149.7 5758.2 4714.6 7832.7 8381.2 8092.299999999999 True False 7425.815471838666 6521.228354593605 6659.407839637837 5751.900207399681 6054.8317941209025 5694.6378359058 6804.390404651924 5382.908987856958 6058.605956251676 6487.881099003803 6082.758573881876 1.2207973375309686 1.0720840347986897 1.094800616981903 0.9456071842300574 0.9954088627023789 0.936193302222681 1.1186356193501723 0.8849453619563451 0.9960293315381763 1.066601776184483 1.0 12.570510029102909 -5.130892895920591 1.0167958164851751 0.9918301685565399 1.3761550024873417 0.5167719011011371 0.063498088564151 1.1505293212487315 0.7727156853308517 0.007903855139001253 0.5099236866561205 7.397876962356572e-06 5.130892895920591 0.38432483393080175 ATEVSKT(ph)PEAR ddPTM_A549_PD325901_60min_R1 2 ATEVSKTPEAR 11 1 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 ATEVSKT(1)PEAR;ATEVS(0.023)KT(0.977)PEAR 108.23 4.9133e-05 265960000.0 19015.1 19350.9 19665.6 18983.5 22236.3 19303.8 20835.8 19604.8 21414.6 21098.3 21916.0 True False 20945.498953823244 20981.668254989447 21000.225874859516 20156.067680343396 20674.498999070525 19146.5962529545 21628.717770787236 19213.766884331926 20514.618833277484 19766.1497373416 19220.470936970505 1.0897495187557893 1.0916313301476543 1.0925968434241462 1.0486770977902147 1.0756499706416247 0.9961564581711727 1.1252959327434833 0.9996512024777872 1.0673317475180948 1.0283905010527854 1.0 14.230356064782255 -14.999999999999998 0.10794090175616011 0.7929045085652344 1.106921272015221 0.2968855168594048 0.035550809203323555 76.02111959138216 0.5830534077026006 3.5541683714837773 0.17693001861964572 1.000000000000004e-15 14.999999999999998 0.31401676344998664 ATFDAISK ddPTM_A549_MK2206_60min_R1 1 ATFDAISK 8 0 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 0 87.30799999999999 0.0075169 5180000.0 3233.3 3465.6 3296.0 3230.1 4752.5 3496.6 2832.5 3207.9 5188.9 4248.4 4667.8 False True 3779.001993404577 3641.9842372255757 3763.4223615805613 4021.4746450046964 4053.41354559868 3866.60789114477 3347.1285855261317 3662.6296487817262 4013.6224349706113 3288.6834893580585 3508.656435273757 1.0770510202745818 1.0379996743515345 1.072610679046701 1.1461580007023195 1.1552608870017276 1.1020195229924483 0.9539630474720383 1.0438838103269452 1.1439200471782456 0.9373056467700192 1.0 11.776702971817029 ATFDAISK ddPTM_A549_PD325901_60min_R1 2 ATFDAISK 8 0 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 0 ; 118.06 0.0034650999999999996 17123800.0 12028.8 12645.3 10927.2 11325.0 14666.900000000001 13797.3 12622.5 13877.0 14005.3 13271.2 14754.900000000001 False True 13249.954920865466 13710.963809684203 11668.785502591581 12024.519529058873 13636.74754205814 13684.939363280228 13102.85614479703 13600.212348704097 13416.705945742684 12433.25416712284 12940.14083901744 1.0239420950438087 1.059568360210003 0.9017510433431732 0.9292417817279266 1.053833007824789 1.0575572193168912 1.0125744617314338 1.0510096078472648 1.0368284327546338 0.9608283496910464 1.0 13.659565699093648 -6.778466916198418 24.999726002075654 1.025172612595855 0.9789163536707024 0.18003028532891174 0.04725200215575875 310.01653930721085 455164.06618452683 0.006592724384307754 0.012482460983314372 1.6654556944835247e-07 6.778466916198418 -0.046256258925152505 ATFSGS(ph)AGR ddPTM_A549_MK2206_60min_R1 4 ATFSGSAGR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 ATFSGS(1)AGR;ATFSGS(1)AGR;ATFS(0.001)GS(0.999)AGR;ATFS(0.001)GS(0.999)AGR 136.36 4.4597e-05 165072000.0 12918.7 15126.8 13561.500000000002 13601.499999999998 20369.8 16866.8 18625.8 16806.3 25896.3 26317.300000000003 26170.500000000004 True False 15099.060728109263 15896.68950821325 15484.7246227472 16933.868110594543 17373.429403710885 18651.633580724287 22009.866763739676 19188.644492135143 20030.829397893463 20372.20365184135 19671.64258094431 0.767554649591669 0.8081017862540969 0.7871597178034879 0.860826341314181 0.8831712619941724 0.9481482547264206 1.1188626813024947 0.9754469873666248 1.0182591166686352 1.0356127388963272 1.0 14.263829807142667 -7.014200876405737 1.4138947572671925 1.0133732735305472 0.7930828151780717 0.8604725908981301 0.040680885878889204 0.10419036013756075 0.4124229493142301 0.006054469033300228 0.013709652900918025 9.67830097406228e-08 7.014200876405737 -0.22029045835247552 ATFSGS(ph)AGR ddPTM_A549_PD325901_60min_R1 2 ATFSGSAGR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 ATFSGS(1)AGR;ATFSGS(1)AGR 160.0 8.9149e-06 299130000.0 16849.5 17145.8 16033.4 16229.0 17733.5 17827.8 17090.9 17881.4 17490.699999999997 17371.1 19882.5 True False 18560.048836053684 18590.736739190324 17121.52294066658 17231.428471266798 16487.96013725381 17682.616307588258 17741.303551999343 17524.74144931308 16755.62670454768 16274.285781429531 17437.078545551918 1.0644012864636794 1.0661612087497705 0.981903183835469 0.9882061623024816 0.945568954924492 1.0140813589498325 1.017447017036293 1.0050273848071598 0.960919379973885 0.9333149322528568 1.0 14.089870726952052 -5.760303095713704 24.98156053597859 0.9853930293470542 1.0652812788370254 0.5997448202155855 0.0258809102029535 12.795836267547223 281281.96934222657 0.003168530963533237 0.011043608885956966 1.736588434286053e-06 5.760303095713704 0.0798882494899712 ATGAALT(ph)PTEER ddPTM_A549_MK2206_60min_R1 2 ATGAALTPTEER 12 0 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 ATGAALT(0.5)PT(0.5)EER;ATGAALT(0.5)PT(0.5)EER 121.04 1.457e-05 66429000.0 1355.47 1319.72 1485.8 1432.41 2054.3900000000003 1977.98 2123.05 2006.71 2763.1000000000004 2540.4 2989.3 True False 1584.2401979402164 1386.8881110201226 1696.5087818071586 1783.350514303329 1752.1919524339767 2187.2885307231386 2508.780703795675 2291.1672877916335 2137.262261764014 1966.5218756155743 2246.9743095170847 0.7050548781221705 0.6172247297825981 0.7550192161172368 0.7936675140209338 0.7798006167727634 0.9734372669321824 1.116515081267154 1.0196677719399678 0.9511734302931796 0.875186630877954 1.0 11.133767914411692 -7.0402389586987395 1.7341159813965907 0.9921519844676723 0.7015786441711445 0.7885850488502786 0.06729780653044226 0.11016034083928879 0.6558034691243345 0.009655956254588816 0.020176159282080514 9.11509168283268e-08 7.0402389586987395 -0.2905733402965278 ATGAALT(ph)PTEER ddPTM_A549_PD325901_60min_R1 1 ATGAALTPTEER 12 0 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 ATGAALT(0.773)PT(0.227)EER 95.273 0.00027506 52837000.0 1225.6 1150.0 1276.9 1206.9 1370.9 1249.9 1461.1 1173.2 1151.2 926.35 1420.2 True False 1350.022009760967 1246.914535925351 1363.5581126234713 1281.4474719312282 1274.6127133482544 1239.7212288030246 1516.702960044599 1149.799605642405 1102.8190674058383 867.8601029081204 1245.5244033895558 1.0838984817054027 1.0011161022072406 1.094766275885643 1.0288417219637862 1.0233542673909384 0.9953407780925541 1.2177223954159877 0.9231449841635808 0.8854254998172971 0.6967828976665057 1.0 10.282537573044683 ATGAAT(ph)PK ddPTM_A549_MK2206_60min_R1 2 ATGAATPK 8 0 P10412 P10412 HIST1H1E Histone H1.4 1 ATGAAT(1)PK;ATGAAT(1)PK 97.456 0.0026062 457400000.0 6584.099999999999 5637.5 4507.9 4001.6 6971.5 7259.299999999999 6963.7 6779.0 6941.1 7812.099999999999 8499.7 True False 7695.335114209964 5924.424670290623 5147.188004784284 4981.992179638648 5946.001585090205 8027.4743076666555 8228.914150407174 7739.9440098168025 5368.951932659042 6047.341184260917 6388.9899102138825 1.204468190176301 0.9272865904545298 0.8056340794271145 0.7797777504193721 0.9306637932835853 1.2564543723622694 1.2879835883371582 1.211450341695358 0.8403444062536181 0.9465253927844239 1.0 12.641372145926084 -5.254804045020325 23.214645986005625 0.9686861679703501 1.2044684845286635 0.08290924694296664 0.17243473112003385 496.26779808078163 1736125.2605680488 0.026130660670113465 0.3330356065255687 5.561551395425517e-06 5.254804045020325 0.2357823165583134 ATGAAT(ph)PK ddPTM_A549_PD325901_60min_R1 2 ATGAATPK 8 0 P10412 P10412 HIST1H1E Histone H1.4 1 AT(0.01)GAAT(0.99)PK;AT(0.001)GAAT(0.999)PK 126.29 0.0011436 620180000.0 25233.0 23590.0 22739.0 21748.0 22621.0 19050.4 16184.1 21156.0 23040.0 28204.0 32560.0 True False 27794.635584447195 25578.012089112188 24282.205280715094 23091.324566708372 21032.178998213465 18895.259858539983 16799.994781779344 20734.026983439064 22071.70892375824 26423.194626675242 28555.326414845746 0.9733608077404756 0.895735237535731 0.8503564248556766 0.8086520963284569 0.7365413615891625 0.6617070168988315 0.588331386506061 0.7261001566649774 0.7729454254209922 0.9253333070967096 1.0 14.801472255629884 -2.6187161902918046 1.0129132721589778 0.8260832327626403 43.261486157155666 0.13922599382989487 0.11531395280906978 858.828008080485 4.36534959696193 0.02228465282992092 83714.97571969133 0.002405934554999179 2.6187161902918046 42.435402924393024 ATGAAT(ph)PKK ddPTM_A549_MK2206_60min_R1 2 ATGAATPKK 9 1 P10412 P10412 HIST1H1E Histone H1.4 1 AT(0.006)GAAT(0.994)PKK;AT(0.01)GAAT(0.99)PKK 58.978 0.0086669 222634600.0 19487.69 13249.58 10471.74 7981.63 14889.48 14898.87 15731.0 16281.97 15404.95 20576.61 20974.0 True False 22776.73564372327 13923.92702846815 11956.790194374273 9937.129708308981 12699.257215974889 16475.458534330497 18589.11907463779 18589.98910894187 11915.75342165016 15928.339509923715 15765.576947048245 1.4447131062962912 0.8831853775624176 0.7584112040132421 0.6303054903531132 0.8055053905497916 1.045027314234457 1.1790953884575845 1.1791505741515178 0.7558082689692572 1.0103239204896934 1.0 13.944490346488866 -5.26028925814159 24.301021167189518 0.9006888443982674 1.44471336312415 0.42753998561353135 0.17095295033575156 50.04109698174951 1057115.822091023 0.02544142308033788 0.21626848134319102 5.491749787022158e-06 5.26028925814159 0.5440245187258826 ATGAAT(ph)PKK ddPTM_A549_PD325901_60min_R1 3 ATGAATPKK 9 1 P10412 P10412 HIST1H1E Histone H1.4 1 ATGAAT(1)PKK;ATGAAT(1)PKK;ATGAAT(1)PKK 83.31 0.0034816 317113300.0 8754.3 7798.889999999999 6114.099999999999 6879.299999999999 6755.17 5234.23 4149.349999999999 5883.94 7058.610000000001 8908.1 10143.3 True False 9643.03009142496 8456.129830506834 6529.039593070062 7304.2187369761305 6280.710163271376 5191.604166283423 4307.2557848614415 5766.5802008383625 6761.961168677482 8345.641045734139 8895.738403676436 1.0840055826551378 0.950582115478135 0.7339513929919226 0.8210918987857645 0.7060358430364454 0.5836057593755043 0.48419317086497693 0.6482407574457391 0.7601348940165433 0.938161697997442 1.0 13.118898648120561 -5.537904009441891 3.64555486572448 0.7977845007286885 1.067587146678427 0.29925009666511126 0.14857270333152456 0.28359912323144143 7.790996723170459 0.02575754192750842 0.1435946493583947 2.8979840479824107e-06 5.537904009441891 0.2698026459497386 ATGDGSS(ph)PELPSLER ddPTM_A549_MK2206_60min_R1 1 ATGDGSSPELPSLER 15 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 ATGDGS(0.012)S(0.988)PELPSLER 176.89 1.2869e-27 7540400.0 1738.2 2197.5 1781.2 1569.1 2415.3 2061.0 1857.2 1996.6 2686.2 2876.1 2640.2 True False 2031.565665090105 2309.3433637186063 2033.8009437036692 1953.5295704395758 2060.0125695285633 2279.0936520189225 2194.6292000138146 2279.624164331058 2077.779988979949 2226.3870124618 1984.5654741869348 1.0236828623265382 1.1636518894216534 1.0248091938296497 0.984361360634839 1.0380169343480787 1.1484094032990544 1.1058487253553284 1.1486767224271133 1.0469697351916312 1.12185112631466 1.0 10.95460744474566 -9.453889815789033 1.5810059911848566 1.0128240429703297 1.0786840072746973 0.0 0.06538228557578532 0.4108061546945286 2.0984782637824506 0.013487998236249046 0.011070881071981663 3.516496457235179e-10 9.453889815789033 0.06585996430436758 ATGEGGAS(ph)DLPEDPDEDAIPIT ddPTM_A549_PD325901_60min_R1 2 ATGEGGASDLPEDPDEDAIPIT 22 0 O15541 O15541 RNF113A RING finger protein 113A 1 AT(0.003)GEGGAS(0.997)DLPEDPDEDAIPIT;AT(0.036)GEGGAS(0.964)DLPEDPDEDAIPIT 133.71 6.638e-22 14202600.0 2023.1599999999999 2084.21 2224.75 1734.3899999999999 2473.6000000000004 1887.18 2533.0099999999998 2115.98 1606.3899999999999 2277.8 2210.98 True False 2228.5497138283263 2259.853691235632 2375.73491350855 1841.519331214518 2299.8628694567365 1871.811431772535 2629.4050816662584 2073.775118945803 1538.8790146717024 2133.97931926822 1939.0434765569917 1.149303633864563 1.1654476645610228 1.2252097192410338 0.9497050238834047 1.1860811257004014 0.9653272112785034 1.3560320402588848 1.0694835593000958 0.7936279063758642 1.1005319607672546 1.0 10.921129436074807 -8.58394707538917 6.965633995813258 0.9032830174394384 1.1394235948059657 0.23080937832157222 0.12930680122280527 0.1452400374922733 13.4510555830909 0.020378782549271807 0.02313539729705733 2.6064711641357875e-09 8.58394707538917 0.23614057736652727 ATGEPGTFVCTSHLPAAASAS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ATGEPGTFVCTSHLPAAASASPK 23 0 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 ATGEPGTFVCTSHLPAAAS(0.043)AS(0.957)PK;ATGEPGTFVCTSHLPAAAS(0.155)AS(0.845)PK 169.91 7.668600000000001e-41 9785100.0 2659.9 4102.1 3382.3 3198.8999999999996 4343.1 3095.7 2737.7 2855.4 4871.5 4483.3 4893.200000000001 True False 3108.8260916886247 4310.879368514264 3861.960999263936 3982.6306436040786 3704.23574326978 3423.2849192406497 3235.1046526372047 3260.1616942957535 3768.1130281869655 3470.519416212923 3678.0833945502295 0.8452299086787792 1.1720450316329531 1.049992777484642 1.0828005285320863 1.007110319673094 0.9307252044129528 0.8795626160708099 0.8863751428600816 1.0244773225561257 0.9435673539526451 1.0 11.844738475543013 -6.981034790406824 13.5938401613763 0.9846872760464676 1.0476437816951363 0.11707724086510729 0.08781463700404508 2.6022977156659723 1858.6708001951722 0.012608784415998327 0.02377490918788896 1.0446365322591025e-07 6.981034790406824 0.06295650564866873 ATGEPGTFVCTSHLPAAASAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 ATGEPGTFVCTSHLPAAASASPK 23 0 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 ATGEPGTFVCTSHLPAAAS(0.091)AS(0.909)PK;ATGEPGTFVCTSHLPAAAS(0.049)AS(0.951)PK 135.8 8.051100000000001e-23 10159700.0 3281.0 3692.6 3476.2 3982.4 4045.7 3319.2 3653.2 4676.8 3144.6 4148.4 3957.3 True False 3614.0847046554613 4003.788361180826 3712.1158360887366 4228.3838033133825 3761.5439889073086 3292.169535677251 3792.2245251077443 4583.517555121373 3012.443397641066 3886.4693160296256 3470.577187391557 1.0413497552468391 1.1536376069451504 1.0695961033728563 1.2183517539027517 1.0838381588436703 0.9485942417986114 1.0926783414830008 1.3206787538894327 0.8679949285050137 1.119833706666714 1.0 11.760959900243872 -8.79958323942402 24.999996655265537 0.9376642570143382 1.1117627357718705 0.1370702183699971 0.11003722787219684 119.8315954142821 78538.68702268302 0.017285371903753902 0.01840186978190311 1.5864148282531502e-09 8.79958323942402 0.17409847875753226 ATGNQPPPLVGTYNT(ph)LLSR ddPTM_A549_MK2206_60min_R1 1 ATGNQPPPLVGTYNTLLSR 19 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 1 ATGNQPPPLVGT(0.161)Y(0.001)NT(0.837)LLSR 92.31 4.4214e-06 3632100.0 626.34 611.91 803.95 556.14 808.35 884.87 810.97 714.89 1107.9 1012.7 1353.6 True False 732.0508794572174 643.0536053210707 917.9621989055494 692.3943249660736 689.4427858147702 978.5063560708326 958.3127516342895 816.2278467588043 856.9624189527534 783.9303666493048 1017.4637625405032 0.7194859477150921 0.6320162240623012 0.9022062826232665 0.6805100588911742 0.6776091799999854 0.9617112590109371 0.9418642578891265 0.8022181003486223 0.8422535037641101 0.7704749746486407 1.0 9.990761697793333 -7.261948859015019 24.999999030946253 0.9171255486322895 0.7250119775796828 0.4184842886978204 0.09248490039194784 29.248477810023925 1435221.3825123685 0.013588528569580337 0.02254278159272847 5.4708038135537906e-08 7.261948859015019 -0.19211357105260662 ATGNQPPPLVGTYNT(ph)LLSR ddPTM_A549_PD325901_60min_R1 2 ATGNQPPPLVGTYNTLLSR 19 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 1 ATGNQPPPLVGT(0.094)YNT(0.905)LLS(0.002)R;ATGNQPPPLVGT(0.093)YNT(0.894)LLS(0.013)R 98.391 1.0288e-06 15586700.0 3931.42 3454.01 4673.5 4241.1 4680.3 3977.12 3689.92 4294.6 4568.5 4483.799999999999 5246.5 True False 4330.534864241562 3745.091544549148 4990.671814038522 4503.063114763055 4351.5718741584615 3944.7316533299336 3830.3419248016994 4208.940833951477 4376.5018323867 4200.692102789905 4601.213760303691 0.94117228406179 0.8139355699705556 1.0846424604513758 0.978668531684527 0.9457443407000607 0.8573241450685334 0.8324633725664786 0.9147457721402791 0.9511624672047057 0.9129530427451059 1.0 12.167798766481738 -9.539592681090799 1.1960962022450208 0.9889885570787312 0.922291365920497 0.0 0.07444874397071972 0.6197664446269128 1.830037600332752 0.019159800645593382 0.01430404465216484 2.886737666028597e-10 9.539592681090799 -0.06669719115823425 ATGPEAAGGGGAGGGGGGYRPIIQS(ph)PGYK ddPTM_A549_PD325901_60min_R1 2 ATGPEAAGGGGAGGGGGGYRPIIQSPGYK 29 1 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 ATGPEAAGGGGAGGGGGGYRPIIQS(1)PGYK;ATGPEAAGGGGAGGGGGGYRPIIQS(1)PGYK 193.4 5.929999999999999e-68 86449000.0 10296.5 10107.7 9779.5 10591.9 11510.3 11646.8 9564.0 10988.3 11575.7 11355.099999999999 14144.8 True False 11341.79310011733 10959.51135197623 10443.195678910819 11246.137607049768 10701.856236379317 11551.952322284238 9927.963253621614 10769.12973634541 11089.213584581092 10638.137048126508 12405.079271274884 0.9142862251900563 0.8834696749866 0.8418483631211459 0.9065752310903201 0.8626995444648597 0.9312276100511392 0.8003143741782237 0.8681226053333115 0.8939252496563402 0.8575630042735884 1.0 13.59864333395833 -10.267743360251524 0.7176656296131445 0.9996310308336238 0.8756664973813486 0.0 0.053494691767758375 0.3241623924192385 0.31171028854748883 0.021356643242943823 0.006944376516534815 5.398295323670261e-11 10.267743360251524 -0.1239645334522752 ATGS(ph)PSVR ddPTM_A549_PD325901_60min_R1 1 ATGSPSVR 8 0 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 AT(0.024)GS(0.88)PS(0.096)VR 54.982 0.021818 10629000.0 541.08 693.26 519.71 637.01 819.65 578.0 628.29 784.32 709.42 873.21 903.08 True False 596.0100432779569 751.6834531961819 554.9806458701106 676.3566609453236 762.080611638994 573.292959635289 652.1999197634799 768.6761223128634 679.6055444745042 818.0753715770494 792.006885095789 0.7525313914485385 0.9490870184862973 0.7007270470925119 0.8539782591202119 0.9622146296705797 0.7238484543804846 0.8234775884361154 0.9705422222685554 0.8580803491276588 1.0329144695227082 1.0 9.629369161809882 -14.99999999999378 0.1614796531501804 1.6157795903526873 0.7998555483808183 0.402104272411829 0.08546543381004068 46.33423100673486 0.4810401213956389 8.998995361163054 0.12494499367464054 1.000000000014324e-15 14.99999999999378 -0.815924041971869 ATIS(ph)DEEIER ddPTM_A549_MK2206_60min_R1 5 ATISDEEIER 10 0 C9J0A7;Q9UQN3;Q9UQN3-2 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 AT(0.211)IS(0.789)DEEIER;AT(0.078)IS(0.922)DEEIER;AT(0.067)IS(0.933)DEEIER;ATIS(1)DEEIER;AT(0.001)IS(0.999)DEEIER 184.44 4.8907e-14 1168739100.0 17859.399999999998 19855.12 16748.03 16332.34 23319.2 19319.6 16370.27 17044.7 23818.3 25295.9 26272.700000000004 True False 20873.63009959165 20865.660799925645 19123.1524922397 20333.76403318661 19888.97657075746 21363.987248687426 19344.536158792882 19460.838422204524 18423.493080009346 19581.53862123446 19748.46350036782 1.0569748932215852 1.0565713529833356 0.9683362197714028 1.029637775759511 1.0071151393822118 1.0818050350240929 0.9795463914664847 0.9854355718277557 0.9329076704962999 0.9915474497988033 1.0 14.269452790478129 -7.968247367449174 21.947204771446557 0.9693720588120599 1.0301806911475127 0.4137886183486792 0.0322687987036355 39.957466666968955 27617.78948640954 0.00557286199784578 0.007699907306181838 1.0758522502045178e-08 7.968247367449174 0.06080863233545275 ATIS(ph)DEEIER ddPTM_A549_PD325901_60min_R1 5 ATISDEEIER 10 0 C9J0A7;Q9UQN3;Q9UQN3-2 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 AT(0.001)IS(0.999)DEEIER;AT(0.008)IS(0.992)DEEIER;AT(0.065)IS(0.935)DEEIER;AT(0.137)IS(0.863)DEEIER;AT(0.057)IS(0.943)DEEIER 211.37 2.7668e-26 1572610700.0 22214.79 23760.25 21852.510000000002 22881.760000000002 24445.989999999998 23099.769999999997 22518.620000000003 23430.12 25996.64 23488.83 26646.940000000002 True False 24470.01912713594 25762.60965410463 23335.55273841766 24295.114346952596 22728.987996487187 22911.653131824343 23375.578406761695 22962.78787602645 24904.09162655082 22005.741265171182 23369.535308870083 1.0470905306297709 1.1024014518733816 0.9985458602405533 1.0396062234806698 0.9725904985308043 0.9804068771161253 1.0002585887058404 0.9825949712962735 1.0656648194925076 0.9416422266992505 1.0 14.51234142671024 -5.766501575131458 24.997916705608088 1.0179905488141687 1.0747459938146162 0.27580428834861426 0.03794914845804723 109.96336548813386 543030.4526385211 0.004982629676852591 0.016219031755054347 1.7119789675592265e-06 5.766501575131458 0.05675544500044749 ATISDEEIER ddPTM_A549_MK2206_60min_R1 2 ATISDEEIER 10 0 C9J0A7;Q9UQN3;Q9UQN3-2 C9J0A7 CHMP2B Charged multivesicular body protein 2b 0 ; 66.435 0.014056 1503980.0 660.34 677.6800000000001 519.4 638.76 843.8 485.75 486.27 690.64 915.7 851.92 848.0 False True 771.7892482370262 712.1710173946875 593.0587301592666 795.2562286750264 719.6781377751013 537.1517425852461 574.6189646191674 788.5403349962941 708.295412072422 659.4706803158638 637.4181963906221 1.2108051709337442 1.117274375641224 0.9304075935036984 1.2476208448051238 1.1290517620147584 0.8426991033937619 0.9014787589575335 1.2370847576385493 1.1111942145410059 1.0345965710582372 1.0 9.316096394123944 -5.521416712712088 24.943633329643387 1.052776475491773 1.1874225234111442 0.13297541543911817 0.12314982772721658 69.67003447282148 1188584.9798444458 0.016853007806486114 0.06728116446186648 3.010116381806287e-06 5.521416712712088 0.13464604791937118 ATISDEEIER ddPTM_A549_PD325901_60min_R1 1 ATISDEEIER 10 0 C9J0A7;Q9UQN3;Q9UQN3-2 C9J0A7 CHMP2B Charged multivesicular body protein 2b 0 68.735 0.010937 899160.0 390.23 226.19 211.0 298.5 341.56 302.32 287.09 281.15 263.63 353.44 370.33 False True 429.8458623278572 245.251825113874 225.31972884607438 316.93766705731343 317.57000391803183 299.85800615387666 298.015367051676 275.54224269209186 252.55054789802023 331.12373808155223 324.7817577152894 1.3234913972744407 0.7551280799732198 0.6937573416410735 0.9758481180927278 0.9777950773836886 0.9232600016184977 0.9175865330248092 0.8483919929198672 0.777600779288261 1.0195268983420624 1.0 8.343326791531846 -8.029062812392652 21.261372959343234 0.8882849588543494 0.9246340125189625 0.0 0.16240284273684358 644.8315049854135 471736.8892336992 0.02612165587199375 0.03378044156333123 9.352703953856791e-09 8.029062812392652 0.03634905366461305 ATLDEEDLVDS(ph)LSEGDAYPNGLQVNFHSPR ddPTM_A549_PD325901_60min_R1 1 ATLDEEDLVDSLSEGDAYPNGLQVNFHSPR 30 0 E9PN99;E9PHZ1;B4DKB2;A0A3B3ISF9;P42892-3;P42892-4;P42892 E9PN99 ECE1 Endothelin-converting enzyme 1 1 ATLDEEDLVDS(0.536)LS(0.464)EGDAYPNGLQVNFHSPR 121.82 2.246e-21 16939000.0 437.29 206.42 434.9 402.73 840.16 504.17 521.39 873.47 564.49 574.44 483.21 True False 481.6833588841163 223.81573783105299 464.41492926615024 427.6057174338084 781.1500599946522 500.06420667703054 541.2317817655558 856.0479556260408 540.766448366853 538.1697603654561 423.77823332056573 1.1366401599011537 0.5281435435636173 1.095891418554395 1.0090318091216057 1.8432991564334398 1.1800139019852833 1.2771580492104762 2.020037577009025 1.276059990456829 1.2699325214241461 1.0 8.7271656777044 -6.202613042813549 2.5744097177758016 1.258298533718924 0.8434986638477637 0.23083124784408127 0.33747392180237257 0.3780878166237923 4.869603614863583 0.05079863018509775 0.15631473903625026 6.271724275878037e-07 6.202613042813549 -0.41479986987116035 ATLDEEDLVDSLS(ph)EGDAYPNGLQVNFHSPR ddPTM_A549_PD325901_60min_R1 1 ATLDEEDLVDSLSEGDAYPNGLQVNFHSPR 30 0 E9PN99;E9PHZ1;B4DKB2;A0A3B3ISF9;P42892-3;P42892-4;P42892 E9PN99 ECE1 Endothelin-converting enzyme 1 1 ATLDEEDLVDS(0.137)LS(0.862)EGDAY(0.001)PNGLQVNFHSPR 127.95 8.3729e-28 15852000.0 399.21 631.15 439.24 476.89 569.79 750.06 785.81 725.47 664.2 713.05 687.96 True False 439.73750531713097 684.3392255211178 469.04946776469035 506.3464122042285 529.7699160687878 743.9517600416006 815.7144295617311 710.9999317297946 636.2859838177185 668.0279013101256 603.3452813377546 0.7288322605956778 1.1342414479546123 0.7774146616754842 0.8392315774502166 0.8780542956997469 1.2330447971551035 1.3519860928606344 1.1784295886981084 1.0545967682169102 1.1072066393375195 1.0 9.23684005112132 -7.223120474146085 22.75448675517448 1.0792403886678683 0.8791226179314764 0.46080809715250304 0.13985795964685238 193.8585528354818 115116.2975821672 0.022358104825626585 0.03872439256634107 5.982456175255761e-08 7.223120474146085 -0.20011777073639192 ATLLEDQQDPSPS(ph)S ddPTM_A549_MK2206_60min_R1 2 ATLLEDQQDPSPSS 14 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 ATLLEDQQDPS(0.004)PS(0.498)S(0.498);ATLLEDQQDPS(0.003)PS(0.498)S(0.498) 168.76 1.7694e-22 14178900.0 3672.3 3655.7 3288.2 3226.2 4957.2 3779.3999999999996 3677.6000000000004 3633.7 5377.0 5055.5 5691.6 True False 4292.094460885048 3841.7595152428253 3754.51620429284 4016.619144829622 4228.002446763131 4179.333599437318 4345.772316374548 4148.788102739536 4159.118085304587 3913.459038802762 4278.218639831209 1.0032433641713987 0.8979811081825394 0.8775886695778992 0.938853173008496 0.9882623593379373 0.9768863985881302 1.0157901412317731 0.9697466286817031 0.9721611809602791 0.9147403085872119 1.0 12.062794498474066 -6.677865201169001 4.2362200374606545 0.9868452237810786 0.9213871652951395 0.2376759361224119 0.03818611103560175 0.14088002097566826 4.729369056332788 0.004360303651245713 0.009270097706445053 2.0995914658296742e-07 6.677865201169001 -0.06545805848593911 ATLLEDQQDPSPS(ph)S ddPTM_A549_PD325901_60min_R1 2 ATLLEDQQDPSPSS 14 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 ATLLEDQQDPS(0.254)PS(0.373)S(0.373);ATLLEDQQDPS(0.011)PS(0.494)S(0.494) 126.5 2.2144000000000003e-07 23189000.0 6896.8 7412.0 6161.0 7650.0 8241.599999999999 7850.6 7304.700000000001 6862.5 7902.2 7004.4 8742.8 True False 7596.958058844183 8036.635252416263 6579.12250910267 8122.523125589436 7662.738447976485 7786.667316458139 7582.684355785216 6725.622053972899 7570.098014640736 6562.140988621619 7667.491025175471 0.9908010369885404 1.0481440703391425 0.8580541519384571 1.0593456319570393 0.9993801652739623 1.0155430623774275 0.988939449800228 0.8771607337902274 0.9872979296337023 0.8558394091464155 1.0 12.90453885747588 -7.8477670004861775 0.0021062199844885314 1.5316941089422422 0.44008209245876867 0.0 0.0721820340317567 363790.69480938534 385.2755016356311 99463.10511408534 100213.51430339125 1.4198190520252745e-08 7.8477670004861775 -1.0916120164834735 ATLPS(ph)PDKLPGFK ddPTM_A549_MK2206_60min_R1 2 ATLPSPDKLPGFK 13 1 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 AT(0.035)LPS(0.965)PDKLPGFK;AT(0.02)LPS(0.98)PDKLPGFK 86.641 5.7786000000000005e-05 29629000.0 5313.5 5527.799999999999 6259.5 5455.0 7278.5 5464.5 6424.5 6382.9 7754.7 7480.4 8008.0 True False 6210.288897397459 5809.14140885721 7147.191223396092 6791.475244884258 6207.842291770646 6042.7497629584705 7591.748489925021 7287.695621811433 5998.272831711265 5790.572444636574 6019.3925904435155 1.031713549845048 0.9650710302697146 1.1873608700557408 1.1282658744781846 1.0313070959395996 1.003880320508092 1.2612150438530632 1.2107028262920574 0.9964913804150637 0.9619861734603886 1.0 12.555402198396738 -8.882459897438713 20.354185263187738 0.9983210497269583 1.1013598469658985 0.25514986781956206 0.08779762921920337 2.6357456357346356 450.6087986101374 0.015623814665952208 0.016632581835966474 1.310811076495671e-09 8.882459897438713 0.10303879723894016 ATLPS(ph)PDKLPGFK ddPTM_A549_PD325901_60min_R1 2 ATLPSPDKLPGFK 13 1 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 AT(0.024)LPS(0.976)PDKLPGFK;AT(0.131)LPS(0.869)PDKLPGFK 81.52600000000001 0.00016761 53435000.0 10337.6 10459.2 10497.9 10538.5 13086.3 10930.4 11283.0 11762.0 11772.900000000001 11405.3 13605.2 True False 11387.065541861102 11340.633490565586 11210.350623000963 11189.439210329976 12167.163433284162 10841.386446362572 11712.3807392945 11527.397682889501 11278.125954362567 10685.16741155932 11931.846650468657 0.9543422636439803 0.950450824820159 0.9395319057809585 0.9377793344243558 1.0197217404571877 0.9086092676138061 0.9816067103774304 0.9661034054973151 0.9452121104757567 0.8955166559352009 1.0 13.542529720763802 -10.864341504048971 0.8982699401142441 1.0025655442788743 0.9554586899259954 0.0 0.040930349828572805 0.6813587925202673 0.8846270122837291 0.02264084984316498 0.004413539591643422 1.366653745540411e-11 10.864341504048971 -0.04710685435287898 ATLPSPDKLPGFK ddPTM_A549_MK2206_60min_R1 1 ATLPSPDKLPGFK 13 1 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 46.159 0.040570999999999996 1152100.0 1013.0 1013.7 1036.6 943.09 1507.6 1141.0 897.24 1281.6 1481.6 1010.7 1177.2 False True 1183.96963452783 1065.2930001372254 1183.6054672373816 1174.1470923369193 1285.8340371056443 1261.7398626654974 1060.256893937323 1463.270724735391 1146.019965629027 782.382168038365 884.8687509328314 1.3380172294249126 1.2038994472504427 1.3376056799266796 1.3269166654366873 1.4531353217639498 1.4259062277149772 1.1982080877187682 1.6536584925084161 1.2951298872526453 0.8841787747771352 1.0 9.789319671613779 -10.151725621494322 0.8631867010727551 1.0201155114755647 1.3587729114965088 0.594790725015895 0.12838297043845964 0.30646024719035325 0.4515878195098226 0.05543191516743477 0.0235155841807183 7.05138420520754e-11 10.151725621494322 0.33865740002094413 ATLPSPDKLPGFK ddPTM_A549_PD325901_60min_R1 1 ATLPSPDKLPGFK 13 1 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 89.959 0.00018832 1951400.0 2012.7 1749.7 1862.5 2019.9 2137.1 2633.8 2113.1 1974.9 2485.0 2253.9 2596.9 False True 2217.0278223285704 1897.1533595726842 1988.9004501223374 2144.6646354742606 1986.997468594757 2612.3512060336075 2193.5151768326878 1935.5090702209218 2380.5640918202803 2111.588369347021 2277.4977631054326 0.9734489571158087 0.8329990001772216 0.8732831629263229 0.9416758471586597 0.8724476049036508 1.147026903100705 0.9631250631139009 0.8498401629961649 1.0452541953649666 0.9271527742217452 1.0 11.153233921715414 -7.178191875241142 24.99999999999989 1.0105774421021445 0.8960842791477501 0.21968284975417707 0.07868412191866435 77.55887420438705 23290.757138414374 0.01084020851093084 0.018775791741654918 6.634498874634868e-08 7.178191875241142 -0.11449316295439438 ATLS(ph)SIR ddPTM_A549_PD325901_60min_R1 1 ATLSSIR 7 0 P46779;H0YKD8;P46779-2;P46779-3 P46779 RPL28 60S ribosomal protein L28 1 AT(0.102)LS(0.856)S(0.042)IR 56.81 0.043186 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ATLSSIR ddPTM_A549_MK2206_60min_R1 2 ATLSSIR 7 0 P46779;H0YKD8;P46779-2;P46779-3 P46779 RPL28 60S ribosomal protein L28 0 ; 120.62 0.018302000000000002 6661400.0 2957.7 2451.9 2689.8 2325.9 3268.8 3239.2 2888.8 2144.17 4018.8 3949.6000000000004 4066.1 False True 3456.887451177657 2576.6912370883524 3071.254086219475 2895.7456044136193 2787.9638501531754 3581.9699939930597 3413.6575667671286 2448.112663745229 3108.5482167048676 3057.3826168836704 3056.3751513489515 1.1310416032050048 0.8430546348183444 1.0048681637998387 0.9474444271461776 0.9121798575422553 1.1719667307241828 1.1168974349436418 0.8009856586697932 1.0170702426149778 1.0003296275767306 1.0 11.577605920893433 ATLSSIR ddPTM_A549_PD325901_60min_R1 1 ATLSSIR 7 0 P46779;H0YKD8;P46779-2;P46779-3 P46779 RPL28 60S ribosomal protein L28 0 138.33 0.015211 5905400.0 3399.1 3007.3 2974.1 2944.4 4029.4 3364.7 2684.5 3471.3 3345.5 3686.2 3445.9 False True 3744.174129714835 3260.735725120267 3175.94031071616 3126.268900782423 3746.388844675364 3337.2989987627293 2786.660116514765 3402.0621983178316 3204.9002692896374 3453.4527029091714 3022.0761453598566 1.2389410291543115 1.0789720603588537 1.0509133979276297 1.0344772105039595 1.239673874673088 1.1043067210225233 0.9221012252763541 1.1257367566801424 1.0604962003391252 1.1427417896837766 1.0 11.56132429630615 -7.547927536480954 24.990114058591168 1.030099777569544 1.1218638316142415 0.1466992232580041 0.08389639018757879 237.48124135851114 236923.96916162598 0.011518567199129788 0.017085128471102596 2.8318644626489307e-08 7.547927536480954 0.09176405404469756 ATLSSTSGLDLMSESGEGEIS(ph)PQREVSR ddPTM_A549_MK2206_60min_R1 2 ATLSSTSGLDLMSESGEGEISPQREVSR 28 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 ATLSSTSGLDLMSESGEGEIS(1)PQREVSR;ATLSSTSGLDLMS(0.001)ES(0.008)GEGEIS(0.984)PQREVS(0.008)R 153.88 5.4113e-38 43947000.0 2982.7 3846.6 2770.5 2829.2 4976.9 4229.299999999999 4084.7 3354.6000000000004 5724.700000000001 5186.4 6221.0 True False 3486.1068399863366 4042.375509843001 3163.398559696283 3522.3541270076134 4244.8046028595645 4676.841718817871 4826.837116786793 3830.124823031635 4428.064590467392 4014.7886378887633 4676.154009134508 0.7455072765303483 0.8644658627467211 0.6764958026439734 0.7532587934715078 0.9077555175829677 1.0001470673724646 1.0322237264551033 0.8190758506990532 0.94694584092344 0.8585663838372692 1.0 12.191106730475985 -6.873919997801726 3.754560249588594 0.9673550260047229 0.7611158086703808 0.5677160223795363 0.07329965574340465 0.10182817035370219 2.732462269746857 0.009620628772427267 0.019006463522689636 1.3368417559842647e-07 6.873919997801726 -0.20623921733434214 ATLSSTSGLDLMSESGEGEIS(ph)PQREVSR ddPTM_A549_PD325901_60min_R1 5 ATLSSTSGLDLMSESGEGEISPQREVSR 28 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 ATLSSTSGLDLMSESGEGEIS(1)PQREVSR;ATLSSTSGLDLMSESGEGEIS(1)PQREVSR;ATLSSTSGLDLMS(0.001)ES(0.002)GEGEIS(0.943)PQREVS(0.055)R;ATLSSTS(0.001)GLDLMS(0.013)ES(0.025)GEGEIS(0.893)PQREVS(0.069)R;ATLSSTSGLDLMSES(0.001)GEGEIS(0.993)PQREVS(0.006)R 199.3 9.686699999999998e-78 127440100.0 12424.7 13912.6 14246.1 14654.199999999999 15515.5 15599.500000000002 13800.500000000002 16717.399999999998 17327.7 16428.100000000002 19240.799999999996 True False 13686.046397419283 15085.063628273945 15212.926014758574 15559.356651897093 14425.744805569218 15472.462843997735 14325.685579423376 16383.958342453394 16599.47702769991 15390.826962362918 16874.30357748047 0.8110584436612802 0.8939665900289747 0.9015439330522013 0.9220740032591191 0.8548942324838243 0.9169245280526092 0.8489645521455272 0.9709413053536938 0.9837133100919597 0.9120866465210855 1.0 14.042540341206363 -8.385647037425104 4.707479576685268 0.991639200296038 0.8824019370853129 0.5104602620069366 0.03908269986448115 0.08195222910105275 2.8196150094310815 0.004836368392015044 0.005860658501511012 4.114840091460961e-09 8.385647037425104 -0.10923726321072513 ATLTAS(ph)PLGAS ddPTM_A549_MK2206_60min_R1 2 ATLTASPLGAS 11 0 Q13111;Q13111-3 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 ATLT(0.019)AS(0.98)PLGAS;ATLT(0.001)AS(0.999)PLGAS 126.71 8.5271e-07 8556100.0 1870.1999999999998 1950.52 1316.08 1439.31 2244.58 2007.21 1443.9699999999998 1941.1299999999999 2802.5 2804.7 3123.6 True False 2185.8440379999506 2049.7931366554794 1502.719933746646 1791.9410146130806 1914.4052553771464 2219.6116299218343 1706.3206579495732 2216.291121961307 2167.7382246728866 2171.116322051253 2347.9239130256474 0.930968855452887 0.8730236637072356 0.6400207116635943 0.7632023357621923 0.8153608576310942 0.9453507490630462 0.7267359255056637 0.943936517561716 0.9232574414557733 0.9246962007612284 1.0 11.197169941798652 -8.685415401600302 0.6481324274700966 0.9845183942312841 0.8021230119251881 0.3030933395665363 0.08890975449355826 0.472060824882161 0.42450859673159386 0.025339967572608462 0.02662655498446113 2.063405569282016e-09 8.685415401600302 -0.18239538230609598 ATLTAS(ph)PLGAS ddPTM_A549_PD325901_60min_R1 2 ATLTASPLGAS 11 0 Q13111;Q13111-3 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 ATLT(0.006)AS(0.994)PLGAS;ATLT(0.001)AS(0.999)PLGAS 119.22 1.423e-05 21037400.0 1125.55 1105.75 1278.9 1255.14 1087.67 1220.37 1420.1100000000001 1083.55 1103.71 1381.5700000000002 1238.86 True False 1239.8150074138841 1198.935433129963 1365.6938446504478 1332.667147170238 1011.2758114577982 1210.4317113323834 1474.1530631640105 1061.9377452214692 1057.3249069549138 1294.337434419789 1086.4880737805838 1.1411215984173468 1.1034961745673868 1.2569800604422001 1.2265823982154176 0.9307748845681534 1.1140773106882993 1.3568055634835396 0.9774039594620783 0.9731583185039548 1.1913038584178515 1.0 10.085456623017416 -8.394760783691712 20.847260597678012 0.9862104674829679 1.1555756460846067 0.16540919218133143 0.11813121493223366 3.4442693324412184 551.8609656845593 0.0163217539523869 0.01973202638502415 4.029389183763894e-09 8.394760783691712 0.1693651786016388 ATLYVTAIEDR ddPTM_A549_MK2206_60min_R1 2 ATLYVTAIEDR 11 0 E9PKG1;Q99873-2;Q99873-3;Q99873;E9PQ98;E9PIX6;E9PNR9;H0YDE4 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 0 ; 121.6 2.7634e-05 2700700.0 2449.71 2715.0 3164.7 2821.0 4099.9 2752.2 3088.7 3173.3 4383.6 4335.4 4165.3 False True 2863.161158340742 2853.1819032973904 3613.502047237257 3512.1451266395015 3496.8101411046905 3043.4359772374983 3649.876809219613 3623.124992823673 3390.7215991707626 3356.030128933934 3130.94105356823 0.914473032022654 0.9112857299072153 1.1541265023559188 1.1217538326493965 1.116855948827108 0.9720515094875373 1.1657443390893512 1.1572000017996242 1.0829720333784212 1.071891827892824 1.0 11.612380631680564 -5.740096050326725 24.773422637620623 1.0681716407643222 0.9128791682513903 0.5186581521416203 0.0633893931325733 158.8127837333973 184332.31010335186 0.00980502528835571 0.03789565816115201 1.8192984506981262e-06 5.740096050326725 -0.155292472512932 ATMS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ATMSPR 6 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ATMS(1)PR;ATMS(1)PR 67.277 0.021329 123283000.0 6410.700000000001 6513.1 5609.9 4744.6 6840.8 4792.5 4963.9 5808.3 7174.1 8163.3 8541.9 True False 7492.669433432939 6844.588970300642 6405.468175434096 5907.027212993188 5834.527381952963 5299.639168995968 5865.776376237656 6631.644312172734 5549.177804683589 6319.204860341922 6420.7104855531325 1.1669533224230806 1.0660173801172401 0.9976260711095241 0.9199958830544138 0.9087043240901289 0.8253976224158336 0.9135712300742883 1.0328521005727032 0.8642622677302568 0.9841909045051007 1.0 12.648517232674841 -5.611517603579367 1.5224666208806685 0.9293148784198481 1.1841831515719181 0.6285254055338954 0.05674473379781881 0.3334847344743546 1.1092446165823975 0.009300728676785282 0.10425453773444755 2.446146122592212e-06 5.611517603579367 0.25486827315207006 ATMS(ph)PR ddPTM_A549_PD325901_60min_R1 3 ATMSPR 6 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ATMS(1)PR;ATMS(1)PR;ATMS(1)PR 112.37 0.022025 207252000.0 12240.199999999999 11303.099999999999 11229.2 11095.199999999999 12518.4 12146.599999999999 11400.3 12316.599999999999 12672.4 15742.899999999998 17461.5 True False 13482.816093241008 12255.651905232893 11991.28103866511 11780.525304972532 11639.150770135519 12047.682116792392 11834.144654983524 12070.935750814211 12139.823097458077 14748.890607299885 15313.846197568453 0.8804330355219202 0.8002987457963929 0.7830352273336203 0.7692727975055055 0.7600409864364182 0.7867182392562708 0.7727741615207393 0.7882367104307764 0.7927350804519409 0.9631081843855613 1.0 13.902549052542303 -10.567855338523234 0.6935633621740113 1.0127714321043977 0.7880799993225451 0.8350723414458905 0.03216693855441072 0.22211787270096212 0.17548529828487383 0.02843657601348776 0.00640579396230462 2.704859190115529e-11 10.567855338523234 -0.22469143278185255 ATNES(ph)EDEIPQLVPIGK ddPTM_A549_MK2206_60min_R1 5 ATNESEDEIPQLVPIGK 17 0 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 ATNES(1)EDEIPQLVPIGK;AT(0.005)NES(0.995)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.009)NES(0.991)EDEIPQLVPIGK;AT(0.456)NES(0.544)EDEIPQLVPIGK 351.47 1.2237999999999993e-219 1808505700.0 165061.13 180207.66999999998 163059.92 152537.52 228881.86 179309.53 165466.00000000003 165193.84000000003 245629.03 254103.6 251945.6 True False 192919.41338682178 189379.4706738075 186184.2685696412 189909.21924766933 195213.64159196703 198283.9454485667 195529.0303734041 188610.57270491737 189994.44689395998 196701.42027738527 189380.55417518044 1.0186864972861354 0.9999942787084045 0.9831224191973659 1.002791548872541 1.0308008783805271 1.0470132285342795 1.0324662488448324 0.995934210491586 1.0032415826506225 1.0386569050560117 1.0 17.530928675172817 -5.2362936962479765 21.63173744326169 1.006669460913828 1.0186865911539 0.0 0.020635699294763204 4075.4115945286776 3505554.386480588 0.0027155392204880435 0.1957377496455802 5.803718021965333e-06 5.2362936962479765 0.012017130240072005 ATNES(ph)EDEIPQLVPIGK ddPTM_A549_PD325901_60min_R1 4 ATNESEDEIPQLVPIGK 17 0 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 ATNES(1)EDEIPQLVPIGK;AT(0.023)NES(0.977)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.02)NES(0.98)EDEIPQLVPIGK 374.74 4.781199999999997e-273 3310910000.0 181095.0 184477.0 183286.0 184716.0 222574.0 201720.0 198904.0 204811.0 206593.0 218135.0 221658.0 True False 199479.6310849076 200023.52421208785 195724.8901482537 196125.48779952663 206941.17007861545 200077.25920005303 206473.40056444547 200725.8839338787 197910.6146565098 204361.91887284815 194395.47120583165 1.0261536950811612 1.0289515644132319 1.006838734123669 1.0088994696376603 1.0645369914996634 1.0292279853999549 1.0621307136616642 1.0325646101155528 1.0180824348883941 1.051268929287266 1.0 17.568635083581153 -9.34728477119948 1.2632959320173927 1.0047167154486998 1.0322005310980713 0.0 0.022275082346941134 0.3550239093164268 1.176677194794587 0.0043378312570213915 0.003589329082744977 4.49485026452672e-10 9.34728477119948 0.027483815649371524 ATNES(ph)EDEIPQLVPIGKK ddPTM_A549_MK2206_60min_R1 2 ATNESEDEIPQLVPIGKK 18 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AT(0.027)NES(0.973)EDEIPQLVPIGKK;AT(0.11)NES(0.89)EDEIPQLVPIGKK 81.696 9.360899999999999e-05 67162000.0 4413.200000000001 5847.799999999999 6232.4 5637.8 8078.0 5438.5 5366.4 4996.9 9593.3 8017.799999999999 10095.6 True False 5158.040267619176 6145.428042026693 7116.248035896443 7019.061253090458 6889.73690086189 6013.998460215877 6341.405416193263 5705.225877364447 7420.432867352145 6206.5734113960625 7588.583895614587 0.6797105149749991 0.8098254070272731 0.9377570484539144 0.9249500762779662 0.9079081150889616 0.7925060252270971 0.8356506962857637 0.7518169339422438 0.9778415801188393 0.8178829537593723 1.0 12.889614974336434 -8.85235292003286 7.976769068903592 0.9901071420617088 0.8377726462315744 0.12133760699611018 0.08921414822890053 0.15817009513551872 12.229498986997868 0.013041351568500559 0.01386028397297263 1.4049053940971656e-09 8.85235292003286 -0.15233449583013436 ATNES(ph)EDEIPQLVPIGKK ddPTM_A549_PD325901_60min_R1 2 ATNESEDEIPQLVPIGKK 18 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AT(0.003)NES(0.997)EDEIPQLVPIGKK;AT(0.002)NES(0.998)EDEIPQLVPIGKK 162.82 2.4909000000000002e-23 148902000.0 28173.0 31461.0 33396.0 36864.0 32854.0 60161.0 45214.0 47071.0 47612.0 47125.0 50299.0 True False 31033.102220133576 34112.3288823891 35662.45338646206 39141.00555578156 30546.448380147005 59671.068762316 46934.643512050156 46132.13197851487 45611.033215190044 44149.51945759716 44112.541871631656 0.7034983907851082 0.7733022726655977 0.8084424944325468 0.8872988019979133 0.6924662938045546 1.3527007565322342 1.0639750402194204 1.0457826736160492 1.0339697346826902 1.0008382556161264 1.0 15.428901273961458 -7.219316517242067 24.999950989421794 1.0439290577491518 0.7813371015102235 0.6677260520210568 0.10686235520189483 259.90561779834616 154254.2351491289 0.015430913738758573 0.02672698652986424 6.035086272122057e-08 7.219316517242067 -0.2625919562389283 ATNNS(ph)LER ddPTM_A549_PD325901_60min_R1 1 ATNNSLER 8 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 AT(0.002)NNS(0.998)LER 54.25899999999999 0.023325 1830700.0 801.76 901.24 1026.6 852.02 1312.3 1005.1 1036.9 769.93 1267.8 1106.6 1043.2 True False 883.1540849754837 977.190657702055 1096.2712494472985 904.647340322185 1220.128575189228 996.9147988398435 1076.3597969134519 754.5731421515999 1214.5187748932608 1036.729087146462 914.8930133896527 0.9653085902398827 1.0680928189423935 1.1982507609120816 0.988801233677031 1.3336297876717698 1.0896517781311963 1.1764870658762268 0.8247665367515791 1.327498141442247 1.1331697498764475 1.0 9.83745923581999 -5.415033268496983 3.2594106485975067 1.1358083060744997 0.9638392896174961 0.08091596923173794 0.1417034490310087 0.514479440570321 9.012757439638502 0.021118976640283588 0.17574856923117893 3.845623220797699e-06 5.415033268496983 -0.17196901645700358 ATNS(ph)PKPHMVPR ddPTM_A549_MK2206_60min_R1 6 ATNSPKPHMVPR 12 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 AT(0.066)NS(0.934)PKPHMVPR;AT(0.069)NS(0.931)PKPHMVPR;AT(0.046)NS(0.954)PKPHMVPR;AT(0.058)NS(0.942)PKPHMVPR;AT(0.22)NS(0.78)PKPHMVPR;AT(0.235)NS(0.765)PKPHMVPR 69.878 0.0010323 60392600.0 8492.63 8156.4800000000005 8210.49 7670.43 10445.300000000001 8774.880000000001 8704.1 7690.84 12848.900000000001 12972.5 13237.2 True False 9925.978319131385 8571.609992857131 9374.86094221286 9549.68569433869 8908.810206805245 9703.431977306072 10285.522302304682 8781.04012220969 9938.644665477055 10042.003240207463 9950.0379118655 0.9975819596922919 0.8614650586039896 0.9421934896381915 0.9597637495381413 0.8953543982160528 0.9752155783984151 1.0337168956953535 0.88251323261173 0.9988549544746098 1.009242711350104 1.0 13.280486307318991 -8.063687269817724 0.4880022964147123 1.0029015837538957 0.925841930734859 0.18853122101662223 0.049205435557018846 0.9038248984590872 0.47397333769417943 0.01487596586724903 0.02476028738414783 8.63600191931412e-09 8.063687269817724 -0.07705965301903672 ATNS(ph)PKPHMVPR ddPTM_A549_PD325901_60min_R1 6 ATNSPKPHMVPR 12 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 AT(0.064)NS(0.936)PKPHMVPR;AT(0.076)NS(0.924)PKPHMVPR;AT(0.064)NS(0.936)PKPHMVPR;AT(0.067)NS(0.933)PKPHMVPR;AT(0.223)NS(0.777)PKPHMVPR;AT(0.01)NS(0.99)PKPHMVPR 65.374 0.0016518000000000001 95811100.0 11684.3 13765.5 11751.5 13342.6 15182.2 14063.3 13357.900000000001 13509.7 15355.6 13754.900000000001 15525.1 True False 12870.481534472969 14925.566995026453 12549.027457510156 14166.742098756811 14115.85464774663 13948.773147472259 13866.242194223347 13240.23843534537 14710.257532537422 12886.413266574089 13615.611121717491 0.9452738785954302 1.0962098477694862 0.9216646498880915 1.0404778729439652 1.0367404387182613 1.0244691202456098 1.0184076256486267 0.972430713317496 1.0803964215072155 0.9464439863459159 1.0 13.732974117163232 ATPAQTPRS(ph)EDAR ddPTM_A549_MK2206_60min_R1 1 ATPAQTPRSEDAR 13 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 ATPAQT(0.001)PRS(0.999)EDAR 135.47 6.0116e-09 18332000.0 1957.1 2377.7 2049.8 1645.9 1683.7 1565.9 1656.7 1714.2 2004.4 3253.6 2596.7 True False 2287.410633498932 2498.7147740221762 2340.4924626116012 2049.1455738872596 1436.0299603839026 1731.6024986397044 1957.7009453278522 1957.1930995173282 1550.4066003690748 2518.6095002766638 1951.86772472586 1.171908631165157 1.2801660391065286 1.1991040340299308 1.0498383409536947 0.735720941635834 0.887151560889152 1.0029885327412806 1.0027283481990135 0.7943195026634449 1.290358700218993 1.0 10.930639571503397 -6.426662111088517 3.431371623968549 0.9049256611425773 1.2230377179435061 0.33938591264049445 0.14368633463064037 0.11217620861916906 2.4699880116622364 0.014203418562500708 0.03487946166718669 3.744017662889232e-07 6.426662111088517 0.3181120568009288 ATPATAPGT(ph)SPR ddPTM_A549_MK2206_60min_R1 1 ATPATAPGTSPR 12 0 Q96P47;Q96P47-2;Q96P47-4;H0Y873;Q96P47-5 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 ATPAT(0.001)APGT(0.664)S(0.335)PR 90.697 0.00028798 15460000.0 1240.2 1516.4 1524.6 1478.8 1610.5 985.3 1342.0 1470.0 2271.5 2095.8 1890.2 True False 1449.5154400211413 1593.5782829319207 1740.8112052383872 1841.106066385854 1373.597583416449 1089.5637920107931 1585.8240288706322 1678.3770016861938 1757.0088768401288 1622.3573244036847 1420.8111731339075 1.0202027316718802 1.1215975163096008 1.2252234766697747 1.2958133362119437 0.9667699757643947 0.7668603770953769 1.1161398916738197 1.1812808298685946 1.2366237752513336 1.141852876075871 1.0 10.472499116734069 -11.226082795238861 1.700803751238939 1.000042471250543 1.1235978218130598 0.0 0.14686463295219343 0.8388332670639937 4.378395879355927 0.11326312924731202 0.023432548170362628 5.941788717254105e-12 11.226082795238861 0.12355535056251687 ATPATAPGTS(ph)PR ddPTM_A549_MK2206_60min_R1 1 ATPATAPGTSPR 12 0 Q96P47;Q96P47-2;Q96P47-4;H0Y873;Q96P47-5 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 ATPATAPGT(0.042)S(0.958)PR 101.56 0.00022504 18008000.0 1367.5 1784.7 1825.9 1815.4 1979.4 1699.8 1518.3 1565.6 2556.4 2572.3 2860.0 True False 1598.3005678349546 1875.5336069299638 2084.8400758525318 2260.1730814964017 1688.2328820953237 1879.6717077640783 1794.1554568064687 1787.5285944489153 1977.3794817319415 1991.215643460064 2149.7830680155434 0.743470628090089 0.8724292394121709 0.9697909090785796 1.0513493733964325 0.7853038323786432 0.8743541316934811 0.8345751176013526 0.8314925450124492 0.9198041938051233 0.9262402672554992 1.0 11.069975371226498 -9.691109830928184 0.9794641777598363 0.9867474715533459 0.8774348562089965 0.13556130789679177 0.08228097023426696 0.5121646572821519 1.020518542374411 0.02594858256910612 0.01661178208539039 2.036526984966306e-10 9.691109830928184 -0.10931261534434933 ATPATAPGTS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ATPATAPGTSPR 12 0 Q96P47;Q96P47-2;Q96P47-4;H0Y873;Q96P47-5 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 ATPATAPGT(0.033)S(0.967)PR;ATPATAPGT(0.073)S(0.927)PR 151.52 2.2751e-12 52156000.0 7826.0 7713.4 7288.2 7303.6 8365.7 7894.5 7930.9 8383.7 8592.7 9125.7 8982.7 True False 8620.4897588033 8363.435288179653 7782.821079506913 7754.726784320915 7778.122092098252 7830.209809413133 8232.714739455007 8216.480526614587 8231.57870091917 8549.501744598296 7877.884846026872 1.0942645046596426 1.0616346204143443 0.9879328311624276 0.9843666080282869 0.987336352856321 0.9939482440343383 1.0450412642940687 1.0429805318566547 1.044897058259322 1.0852534546643122 1.0 12.943592613358119 -4.458039422490011 0.0025756744644504803 0.10002418796080445 1.9685051427422888 0.0 0.04015152575192021 331971.5727814534 102.33958566701844 36219.90657591275 38039.91496424841 3.483056966258153e-05 4.458039422490011 1.8684809547814845 ATPELGS(ph)SENSASSPPRFK ddPTM_A549_PD325901_60min_R1 1 ATPELGSSENSASSPPRFK 19 1 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 ATPELGS(0.309)S(0.277)ENS(0.166)AS(0.136)S(0.112)PPRFK 45.88 0.0080255 6490800.0 4068.8 3716.5 4070.5 3954.1 4489.5 4610.3 3801.0 4582.0 4630.9 4288.7 4349.1 True False 4481.86158070775 4029.702498057886 4346.748607904953 4198.335776587343 4174.173007934194 4572.755245340092 3945.649134987008 4490.608415490537 4436.279377388548 4017.9107500858786 3814.1882712163906 1.175049908922936 1.0565033007069589 1.1396261271913362 1.1007154020869672 1.0943804319871708 1.1988803174316787 1.0344662755015743 1.1773431451663574 1.1630992132367302 1.0534117522217954 1.0 11.897160342588185 -10.854787803195666 1.0820547860216174 0.9994250988227074 1.1266733382020615 0.34599418389639625 0.05145902556843018 0.34088087693934027 0.7034504685268549 0.03293649624535793 0.007882386725822435 1.3970507950160614e-11 10.854787803195666 0.12724823937935414 ATPELGSSENS(ph)ASSPPRFK ddPTM_A549_PD325901_60min_R1 1 ATPELGSSENSASSPPRFK 19 1 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 ATPELGS(0.122)S(0.107)ENS(0.324)AS(0.251)S(0.196)PPRFK 63.165 0.00067046 6752900.0 4449.7 4759.7 4008.6 4762.0 5759.8 5537.6 4442.3 4693.0 5143.6 5354.9 6184.8 True False 4901.430268303995 5160.816623168602 4280.647701670016 5056.13792471332 5355.25151823129 5492.503621585431 4611.354157419832 4599.394433412721 4927.432379350826 5016.790700127051 5424.108808677455 0.9036378954018617 0.9514589041636407 0.7891891281424633 0.9321601212395559 0.9873053264831252 1.0126094101944558 0.8501588592844259 0.847953939650812 0.9084316987645878 0.9249059849428576 1.0 12.405170404169688 -10.522728203018572 0.9228982833668032 0.9979557590264612 0.9102460170482675 0.04993068758942831 0.06454567977864706 0.6796219877381027 1.0721739979707379 0.037280471223855714 0.011630222753983675 3.0010400893594084e-11 10.522728203018572 -0.0877097419781937 ATPELGSSENSAS(ph)SPPR ddPTM_A549_MK2206_60min_R1 1 ATPELGSSENSASSPPR 17 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 ATPELGSSENS(0.003)AS(0.759)S(0.238)PPR 128.06 5.7795e-12 16283000.0 1286.7 1391.7 1077.8 1110.5 1306.6 1314.8 1064.1 1138.8 1678.1 1716.7 2080.8 True False 1503.8635032052916 1462.5315855686856 1230.648246757139 1382.5725498522397 1114.400870842554 1453.9312633063946 1257.4331960664979 1300.2283874287323 1298.013029375048 1328.8962777000695 1564.0799328415173 0.9615004141592505 0.9350747074106722 0.7868192800871618 0.8839526170126568 0.7124961118949873 0.9295760611575574 0.8039443315291924 0.8313055874750359 0.8298891905203998 0.8496345038362703 1.0 10.611098528616374 -10.710895333713385 0.9046186986825393 1.0026049175076375 0.8496298908243203 0.0 0.08190150272226503 0.48802530921648124 0.6909225220991164 0.04990517096041471 0.012154442786735368 1.945828975799492e-11 10.710895333713385 -0.1529750266833172 ATPELGSSENSASS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 ATPELGSSENSASSPPR 17 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 ATPELGSSENSAS(0.128)S(0.872)PPR 193.31 3.1503e-40 16229000.0 1607.9 1571.8 1589.1 1447.7 2570.3 1850.8 1282.7 1721.6 2193.1 2748.0 2525.2 True False 1879.2742106192482 1651.7979062993888 1814.458275117617 1802.3865649897223 2192.212274855821 2046.6504275383897 1515.749986462265 1965.6420721788777 1696.3663516610552 2127.224891431112 1898.1231480254705 0.9900696973081909 0.8702269439249385 0.9559223156859521 0.9495625017084173 1.1549368001419074 1.078249548596162 0.7985519738479716 1.0355714139114967 0.8937072146376311 1.1206990935461514 1.0 10.89035788043637 ATPELGSSENSASS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 ATPELGSSENSASSPPR 17 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 ATPELGSSENSAS(0.036)S(0.964)PPR;ATPELGSSENSAS(0.023)S(0.977)PPR 236.3 7.6773e-74 47872000.0 9209.2 10027.099999999999 9946.7 9187.2 11389.7 9279.2 10151.6 11008.0 10163.6 10658.5 11834.7 True False 10144.111204545285 10872.118907110505 10621.742876366097 9754.672478354938 10589.72676433191 9203.633271708957 10537.92469316867 10788.436804391058 9736.459236871067 9985.520491009012 10379.106926344444 0.977358772439015 1.0475004240985983 1.0233773437101596 0.9398373624608727 1.0202926744547614 0.8867461658332204 1.0153016794172447 1.0394378708063643 0.9380825639398515 0.9620789690164552 1.0 13.341394691418245 -6.232103647348241 23.94510214696417 0.9741448522155648 1.0192210241869886 0.14304191421139034 0.04429880997918332 586.8709145156373 479027.8952963122 0.006079394755067766 0.016081417584520794 5.859982953235086e-07 6.232103647348241 0.04507617197142377 ATPGAPALTSMT(ph)PTAVER ddPTM_A549_MK2206_60min_R1 1 ATPGAPALTSMTPTAVER 18 0 P54198;P54198-2 P54198 HIRA Protein HIRA 1 AT(0.001)PGAPALT(0.074)S(0.074)MT(0.793)PT(0.058)AVER 41.422 0.04175 3701200.0 1094.2 1824.6 1430.4 951.59 1264.0 1181.9 1042.0 760.24 2797.1 1949.9 2847.1 True False 1278.8742093784335 1917.4643465032843 1633.2522287636018 1184.7295927184987 1078.0672744106746 1306.9678735182756 1231.317912133531 868.0063481373546 2163.561316050858 1509.4162357356352 2140.086494037429 0.5975806178589278 0.8959751635485761 0.7631711303791057 0.553589584355266 0.5037493939681018 0.6107079677198399 0.5753589472033722 0.40559404984599357 1.0109690996503333 0.7053061826898461 1.0 11.063453390632985 -8.782662898132763 24.971683426804088 1.0051799307981482 0.6206577705252834 0.38123691421434824 0.15171625942490172 101.61533914705696 119560.52981413883 0.022338605848463176 0.023792491331225546 1.6494422012584717e-09 8.782662898132763 -0.3845221602728648 ATPGAPALTSMT(ph)PTAVER ddPTM_A549_PD325901_60min_R1 2 ATPGAPALTSMTPTAVER 18 0 P54198;P54198-2 P54198 HIRA Protein HIRA 1 ATPGAPALT(0.05)S(0.218)MT(0.726)PT(0.006)AVER;ATPGAPALT(0.017)S(0.058)MT(0.919)PT(0.007)AVER 90.49799999999999 2.7341000000000002e-06 16796200.0 3955.6 5698.5 3639.3999999999996 5255.0 4231.299999999999 4300.6 3626.6 4174.6 6375.1 4697.2 6415.9 True False 4357.169600041188 6178.732593887491 3886.3915694900616 5579.589415029084 3934.1080851925494 4265.577339459385 3764.612247551668 4091.334328089655 6107.176717007432 4400.617990370831 5626.784973741059 0.7743622015724999 1.098092893672363 0.6906948795141413 0.991612340096125 0.699175124614171 0.7580842984698858 0.6690520901581041 0.7271175897396103 1.0853758843652732 0.7820839095340458 1.0 12.458095116860685 -8.76621066164684 24.99992454582564 1.040316401360988 0.8043761915110713 0.11240516998216077 0.148624821769753 82.11954056877268 430277.6996813512 0.021533921584250385 0.02328660677277014 1.7131261260682947e-09 8.76621066164684 -0.2359402098499167 ATQAS(ph)QEY ddPTM_A549_MK2206_60min_R1 2 ATQASQEY 8 0 P16104 P16104 H2AFX Histone H2AX 1 AT(0.001)QAS(0.999)QEY;AT(0.005)QAS(0.994)QEY 67.563 0.0079501 15910100.0 1585.73 1434.23 1288.8899999999999 1433.26 2232.9 1584.37 1650.56 1635.9499999999998 2558.5 2387.0 2336.83 True False 1853.362456623708 1507.2261809083668 1471.6739828936795 1784.4087643414857 1904.4433679047431 1752.0269817803105 1950.4453868052983 1867.8509223867543 1979.0038350849513 1847.775042156502 1756.530617772992 1.0551267583217445 0.8580699736502718 0.837829963225767 1.0158711418328927 1.0842073281473918 0.9974360617759164 1.1103964639558406 1.063375100603085 1.1266549043101912 1.0519458206195083 1.0 10.778513008802376 -6.460063172352198 5.630135784506974 1.061562579473288 0.9118748421151788 0.499526522471189 0.06331341341466627 0.1412345571012514 8.97418185125114 0.009606661386686493 0.022414899657968862 3.466864178766213e-07 6.460063172352198 -0.14968773735810914 ATQAS(ph)QEY ddPTM_A549_PD325901_60min_R1 2 ATQASQEY 8 0 P16104 P16104 H2AFX Histone H2AX 1 AT(0.001)QAS(0.999)QEY;AT(0.002)QAS(0.998)QEY 85.73100000000001 0.0029234 22361000.0 2011.73 1978.97 2132.7 1654.65 1989.54 2511.2 2145.05 1843.22 2032.8899999999999 2287.4 2531.9 True False 2215.9593486426465 2145.7447470958195 2277.437846966933 1756.8539725171972 1849.8015739403922 2490.749619785705 2226.6810515663983 1806.4555311218821 1947.4547028654044 2142.973173629873 2220.4923510364856 0.997958559779896 0.9663373738235238 1.0256454366545629 0.791200191118483 0.8330591965682469 1.121710515518357 1.0027870848224376 0.8135382813990156 0.8770373390191449 0.9650891941283076 1.0 11.116663886302291 -11.131028266675681 1.5298636994865762 0.9995949582443915 0.9282626661680381 0.023083341688938552 0.09695409530917408 0.9918689638674678 4.195611028872016 0.07011089792846335 0.015468900209480906 7.395571383607348e-12 11.131028266675681 -0.07133229207635339 ATQASKS(ph)TQLK ddPTM_A549_PD325901_60min_R1 1 ATQASKSTQLK 11 1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 ATQAS(0.037)KS(0.899)T(0.063)QLK 58.32 0.0032314999999999996 10662000.0 2868.5 2389.1 2788.8 2807.6 2983.2 3605.1 3860.7 3292.1 3638.0 3109.3 3749.5 True False 3159.7080083219107 2590.437841547178 2978.064738416741 2981.019075477765 2773.670323481297 3575.741260867096 4007.6210511561 3226.436482897512 3485.107511485785 2912.9782673635414 3288.335270038825 0.9608837751767947 0.787765732147073 0.9056451042419343 0.9065435336350507 0.8434876907939344 1.0874016689985744 1.2187385780491848 0.9811762542264791 1.0598394705186605 0.885851967074254 1.0 11.683141684583 -7.259799680562755 24.998864635450687 1.0445619759710951 0.8784962120582838 0.4546410891895728 0.08600611256698473 86.09845745833411 1312653.718295288 0.010804479336832701 0.018097955313258397 5.497944094545167e-08 7.259799680562755 -0.16606576391281136 ATQCLVKS(ph)PEVK ddPTM_A549_MK2206_60min_R1 2 ATQCLVKSPEVK 12 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AT(0.001)QCLVKS(0.999)PEVK;ATQCLVKS(1)PEVK 103.61 5.3547e-05 34865000.0 6236.299999999999 7929.799999999999 8284.7 7144.9 9024.6 8295.5 8231.4 7466.7 10873.5 10696.8 10435.5 True False 7288.834977103562 8333.392949085695 9459.595036100265 8895.400820746752 7697.093294815333 9173.324303892763 9726.938831032578 8525.127590809725 8410.669611411466 8280.385450749758 7844.0773448518175 0.9292150824962646 1.0623802625499381 1.2059538197068818 1.1340276784222345 0.9812617796109632 1.1694586757119816 1.2400360684123684 1.0868234995674655 1.0722318561699944 1.0556226164934868 1.0 12.937388045649062 -9.730153913145847 0.9599618670971505 1.0115973051008715 1.1047942482344428 0.08149408289857418 0.08764692778145207 0.655288290037177 1.252472637009745 0.028575606574651684 0.017691502767653747 1.8614273334146373e-10 9.730153913145847 0.0931969431335713 ATQETS(ph)FDFK ddPTM_A549_PD325901_60min_R1 1 ATQETSFDFK 10 0 Q6NW34;Q6NW34-2 Q6NW34 C3orf17 Uncharacterized protein C3orf17 1 ATQET(0.2)S(0.8)FDFK 68.44 0.0040926 2258500.0 1999.7 1875.9 2104.5 2526.0 2533.4 2180.0 2179.3 2278.0 2330.2 2797.7 2754.3 True False 2202.708071898665 2033.9886764716239 2247.3240253865556 2682.025283037768 2355.4627237555364 2162.2468027766963 2262.2344540587173 2232.5635029435703 2232.2697974887797 2621.0527445415314 2415.5385609462437 0.9118910819770949 0.8420435547403745 0.9303614778586714 1.110321866270325 0.9751294232425031 0.8951406687251041 0.9365341918501718 0.9242508230003182 0.9241292329501576 1.0850800674093901 1.0 11.238129168374686 -9.974600374187114 0.007361786016569486 1.92505510310536 8.110673366177464e-06 0.14412922694843744 0.07080959625871287 8800.260153562775 21.72253919432263 2905.382639898349 2774.5029432530428 1.0602288698434808e-10 9.974600374187114 -1.9250469924319937 ATQQQHDFTLTQT(ph)ADGR ddPTM_A549_MK2206_60min_R1 1 ATQQQHDFTLTQTADGR 17 0 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 ATQQQHDFT(0.097)LT(0.408)QT(0.495)ADGR 48.229 0.018348 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ATQVGEKT(ph)PKDESANQEEPEAR ddPTM_A549_MK2206_60min_R1 1 ATQVGEKTPKDESANQEEPEAR 22 2 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 AT(0.003)QVGEKT(0.942)PKDES(0.055)ANQEEPEAR 117.88 1.7912e-15 13810000.0 2773.7 3325.9 3382.3 2820.9 3902.4 2757.1 2907.3 3067.2 4621.9 4166.1 3737.0 True False 3241.8327495457493 3495.1741039325225 3861.960999263936 3512.020626635013 3328.36212947802 3048.854491985141 3435.518777299249 3501.9849929060483 3575.0470296576677 3224.975116517888 2808.9997640468823 1.1540879394291195 1.2442771084099629 1.3748527318137147 1.2502744470064673 1.1848922780551965 1.0853879487667537 1.2230398952934587 1.2467017753895404 1.2727117586180046 1.1480866455722718 1.0 11.45584078794149 -10.796976193587861 0.9112588309705917 0.9917668857461048 1.229531103829114 0.28628258020719544 0.08103411954802799 0.3711943353358736 0.5159424754911861 0.06112811138453343 0.013337271881345087 1.5959666298081203e-11 10.796976193587861 0.23776421808300907 ATQVGEKT(ph)PKDESANQEEPEAR ddPTM_A549_PD325901_60min_R1 2 ATQVGEKTPKDESANQEEPEAR 22 2 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 AT(0.002)QVGEKT(0.997)PKDES(0.001)ANQEEPEAR;AT(0.001)QVGEKT(0.998)PKDESANQEEPEAR 118.57 1.6567e-15 30680000.0 5830.299999999999 6061.200000000001 5671.2 5862.5 6931.2 6452.5 6194.0 5764.9 7858.2 6921.4 7441.799999999999 True False 6422.187763959985 6571.9985957832505 6056.081735696001 6224.613310296479 6444.376423341904 6399.952979319561 6429.716059486851 5649.914547023442 7527.9471816266105 6484.381622786486 6526.505777456978 0.984016253558326 1.0069704708579907 0.9279209951233237 0.9537436298297234 0.9874160298151035 0.980609409927355 0.985169749132155 0.8656875117675762 1.1534421999025395 0.9935456803216215 1.0 12.6720950793788 -8.76699314042937 24.999931151030218 1.072458810227928 0.9638810818305065 0.31534990794382667 0.054458362272982445 102.7908915526993 462706.16569441627 0.010915186485495495 0.011781043651776029 1.710042324559568e-09 8.76699314042937 -0.10857772839742152 ATRAS(ph)PDPR ddPTM_A549_MK2206_60min_R1 3 ATRASPDPR 9 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 AT(0.242)RAS(0.758)PDPR;AT(0.012)RAS(0.988)PDPR;AT(0.014)RAS(0.986)PDPR 58.699 0.0047298999999999996 58550400.0 4646.030000000001 4484.79 4078.7200000000003 3048.97 5179.76 4275.03 4130.34 4099.969999999999 6211.539999999999 6548.6900000000005 7205.08 True False 5430.166279472199 4713.046654913113 4657.143827252994 3795.9677868734643 4417.824165586583 4727.410837064752 4880.769314013065 4681.153303131525 4804.636107791122 5069.336380737272 5415.859785908189 1.00264159231028 0.87023055271413 0.8599084930837134 0.7008984606193818 0.8157198192393297 0.8728827968119209 0.9011993491250634 0.8643416720853195 0.8871418939413015 0.9360169171896667 1.0 12.402974673354642 -10.139120934549224 0.5104306933342556 1.0099256242038208 0.8508864691014029 0.24042286400898494 0.06952276499037174 0.8879911626103302 0.41892124902664346 0.06462151487817745 0.01836995941250698 7.259037926014166e-11 10.139120934549224 -0.15903915510241795 ATRAS(ph)PDPR ddPTM_A549_PD325901_60min_R1 3 ATRASPDPR 9 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 AT(0.198)RAS(0.802)PDPR;AT(0.002)RAS(0.998)PDPR;AT(0.011)RAS(0.989)PDPR 66.663 0.0014684000000000001 78899800.0 4887.46 5106.16 5334.93 5178.57 5405.46 4811.93 4857.29 4484.26 5507.42 6044.29 6208.43 True False 5383.631341242111 5536.47402327008 5696.990431340221 5498.4385075142045 5025.799137424653 4772.743237470309 5042.1368289610755 4394.817916466083 5275.962289968955 5662.652497875019 5444.832468480369 0.9887597777172125 1.0168309227731458 1.0463114272697225 1.0098453054973051 0.9230401792008365 0.8765638364631562 0.9260407658361463 0.8071539284096025 0.9689852388500494 1.040004909362334 1.0 12.410671944144049 -6.650955432860138 6.935243661948976 0.9548670024922488 1.0188605709134078 0.2517527334750693 0.06102261795926718 0.310054137614452 17.898327001380345 0.009399737536360838 0.019646567781022764 2.2338014429508666e-07 6.650955432860138 0.063993568421159 ATRPASTS(ph)QPDPS(ph)PDR ddPTM_A549_MK2206_60min_R1 1 ATRPASTSQPDPSPDR 16 1 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 2 AT(0.2)RPAS(0.241)T(0.266)S(0.294)QPDPS(0.998)PDR 52.887 0.052734 1601600.0 148.18 231.57 166.7 0.0 0.0 0.0 0.0 0.0 0.0 167.36 216.75 True False 173.18916134682527 243.35592388455862 190.34056664911387 0.0 0.0 0.0 0.0 0.0 0.0 129.55325976343198 162.92499300432476 1.0629993480633635 1.49366846299695 1.168271135933462 0.0 0.0 0.0 0.0 0.0 0.0 0.7951711850617852 1.0 7.3480641227825805 -6.174391946513335 6.138070739982638 0.3398685446480805 1.2837041874081487 0.5999552346523502 0.3612313487866044 0.1742303993885692 10.014409322916382 0.06675236910117188 0.1793456104101157 6.692803178467882e-07 6.174391946513335 0.9438356427600683 ATRPASTSQPDPS(ph)PDR ddPTM_A549_MK2206_60min_R1 3 ATRPASTSQPDPSPDR 16 1 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 AT(0.007)RPAS(0.006)T(0.006)S(0.006)QPDPS(0.976)PDR;ATRPASTSQPDPS(1)PDR;ATRPASTSQPDPS(0.999)PDR 82.765 5.2205e-05 44407800.0 1577.83 1310.55 1405.93 1179.0700000000002 1949.88 1345.3000000000002 1327.65 1421.88 2083.1000000000004 2182.73 2274.4 True False 1844.1291297601654 1377.2513971883595 1605.31201481097 1467.9422029304642 1663.0552349904165 1487.6587530621339 1568.8668196200413 1623.4358443248748 1611.2811760271507 1689.6497770281783 1709.6037097533392 1.0786880721183247 0.8055968698073711 0.938996567246911 0.8586447224908387 0.9727723597595382 0.8701775414822729 0.9176786472032145 0.9495977547680353 0.9424881139615833 0.9883283285995912 1.0 10.73944622835091 -9.793636662697615 0.5298935846213726 1.0004531544927555 0.9148446809640393 0.1359760220475118 0.0665431290933201 1.0583340325866721 0.6187929901148297 0.039495043770564356 0.01614671190777311 1.6082862067854174e-10 9.793636662697615 -0.08560847352871626 ATRPASTSQPDPS(ph)PDR ddPTM_A549_PD325901_60min_R1 4 ATRPASTSQPDPSPDR 16 1 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 ATRPAS(0.001)T(0.001)S(0.001)QPDPS(0.996)PDR;ATRPASTSQPDPS(1)PDR;ATRPASTSQPDPS(0.999)PDR;ATRPASTSQPDPS(1)PDR 126.25 3.7651e-09 96957000.0 3887.99 4042.7799999999997 4065.45 3768.7 4907.16 4138.26 4070.8 3566.92 4568.24 4461.85 4993.74 True False 4282.695882613038 4383.479258737642 4341.35588453684 4001.4840396612944 4562.498010382971 4104.559382595729 4225.716521627234 3495.7749824053926 4376.252759282526 4180.1280295359165 4379.541637926037 0.9778867828371963 1.0008990942745026 0.9912808790174489 0.9136764461854108 1.0417752330226902 0.9372120924826902 0.9648764347924667 0.7982056734276973 0.9992490358774011 0.9544670139305824 1.0 12.09656417017475 -8.927160771518537 24.99999619985876 0.9996827567547227 0.9538944211870395 0.034931150687080526 0.06045724162615361 68.80237337771331 23613.10588765102 0.010032025225514284 0.010679876925706246 1.1826036865034533e-09 8.927160771518537 -0.04578833556768325 ATRPASTSQPDPS(ph)PDRS(ph)ANTSPESSSR ddPTM_A549_MK2206_60min_R1 1 ATRPASTSQPDPSPDRSANTSPESSSR 27 2 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 2 AT(0.002)RPAS(0.003)T(0.006)S(0.006)QPDPS(0.908)PDRS(0.385)ANT(0.308)S(0.287)PES(0.033)S(0.032)S(0.03)R 41.933 0.059133000000000005 3633900.0 0.0 0.0 0.0 163.1 161.51 0.0 151.69 137.78 212.15 146.43 334.95 True False 0.0 0.0 0.0 203.0595073218372 137.7520929510033 0.0 179.25010949283632 157.31073693355356 164.09836373393497 113.35136129994827 251.77267085028177 0.0 0.0 0.0 0.8065192565820134 0.54712885431842 0.0 0.7119522102517176 0.6248125994067855 0.651771946413982 0.4502131264570545 1.0 7.975977881217013 -7.999013646276828 0.2766461052258667 1.0269142722811206 5.593684072140002e-16 0.35870122104123126 0.2843287583073677 1.0303863955308643 0.21706082746994146 0.21720200374369605 0.37654722164534615 1.0022737444245643e-08 7.999013646276828 -1.02691427228112 ATRPASTSQPDPS(ph)PDRS(ph)ANTSPESSSR ddPTM_A549_PD325901_60min_R1 1 ATRPASTSQPDPSPDRSANTSPESSSR 27 2 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 2 AT(0.007)RPAS(0.02)T(0.021)S(0.022)QPDPS(0.9)PDRS(0.379)ANT(0.309)S(0.288)PES(0.027)S(0.021)S(0.007)R 42.571000000000005 0.052288999999999995 5961000.0 292.91 245.97 340.99 0.0 226.8 166.84 333.68 153.43 156.4 0.0 278.7 True False 322.6460075710549 266.69875513179 364.131631939445 0.0 210.8703504175242 165.48131035562577 346.3783749967023 150.36971828649342 149.82705189565058 0.0 244.42166682486194 1.3200384882500775 1.0911420357954211 1.4897682217360875 0.0 0.8627318238878608 0.6770320835517412 1.4171344934199164 0.615206173167289 0.6129859674142872 0.0 1.0 7.9332283686927205 ATRPASTSQPDPS(ph)PDRSANTSPESSSR ddPTM_A549_MK2206_60min_R1 1 ATRPASTSQPDPSPDRSANTSPESSSR 27 2 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 AT(0.022)RPAS(0.022)T(0.022)S(0.022)QPDPS(0.891)PDRS(0.008)ANT(0.009)S(0.003)PESSSR 49.943999999999996 0.0031644999999999998 6080700.0 0.0 191.99 152.57 138.53 145.53 0.0 0.0 140.98 341.02 325.06 281.16 True False 0.0 201.76147094440748 174.20672017789624 172.46985621884804 124.1227297824253 0.0 0.0 160.96434673314258 263.7795144970375 251.6287202360253 211.34021237875862 0.0 0.9546762003949141 0.8242951883936188 0.8160768567306628 0.5873124115157775 0.0 0.0 0.7616361549058459 1.248127422264053 1.1906334218357963 1.0 7.723423489370312 -8.552677109856097 5.78449803507317 1.113902979293121 0.48188895381684976 0.4557593039915899 0.3300935348584945 0.1312640774567183 12.728322863763916 0.05930089793246467 0.06792407528940562 2.8010630857354395e-09 8.552677109856097 -0.6320140254762712 ATRPASTSQPDPS(ph)PDRSANTSPESSSR ddPTM_A549_PD325901_60min_R1 2 ATRPASTSQPDPSPDRSANTSPESSSR 27 2 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 AT(0.001)RPAS(0.004)T(0.004)S(0.004)QPDPS(0.985)PDRS(0.002)ANT(0.001)S(0.001)PESSSR;ATRPASTSQPDPS(0.999)PDRSANTSPESSSR 101.27 9.644100000000001e-13 26675000.0 532.53 420.6 337.35 0.0 583.33 748.91 440.36 475.86 494.28 159.4 693.95 True False 586.5920535721343 456.0454380958286 360.2445996503468 0.0 542.3589131792522 742.8111252603195 457.1181407742384 466.36859899505174 473.5071305050014 149.3354567966258 608.5985493114931 0.963840702932574 0.7493370442827252 0.5919248411911121 0.0 0.8911603778760602 1.2205272689208033 0.7510996227174311 0.7662992288145511 0.7780286874503389 0.2453759657586579 1.0 9.249347084745194 -6.931487357899009 24.999999999782087 0.8969622103118585 0.5717326317415636 0.06752567931457276 0.31693816393872076 53.30535452182337 19450.083506330855 0.0364519645800471 0.06888773889841393 1.1708806855910393e-07 6.931487357899009 -0.3252295785702949 ATRSGYKRK ddPTM_A549_MK2206_60min_R1 1 ATRSGYKRK 9 3 A0A096LNL2 A0A096LNL2 ALG13 0 35.944 0.045938 4482500.0 3043.5 3350.1 3647.5 3163.6 4631.7 3824.7 3324.2 3483.6 5042.2 4684.2 5487.7 False True 3557.168393569056 3520.605780565964 4164.770347046448 3938.6821420193983 3950.3830655758875 4229.427215369614 3928.1641108582417 3977.4109680775664 3900.149750738851 3626.035966681813 4124.952637184927 0.8623537544413226 0.8534899889101758 1.009652888981701 0.9548429978355706 0.9576796179341893 1.0253274612762548 0.9522931428223662 0.9642319119552242 0.9455017048148479 0.8790491153751526 1.0 12.010161839053096 -5.752031840322114 24.99979362073159 0.9744248315149833 0.8579218019772922 0.5361845541651571 0.03779863562801722 71.75081304189212 190667.89606002622 0.0036753078095489024 0.013858427543373297 1.7699791874459057e-06 5.752031840322114 -0.1165030295376911 ATS(ph)DEEDSVLNIAR ddPTM_A549_MK2206_60min_R1 1 ATSDEEDSVLNIAR 14 0 Q5JPF3-3;Q5JPF3 Q5JPF3-3 ANKRD36C Ankyrin repeat domain-containing protein 36C 1 AT(0.029)S(0.971)DEEDSVLNIAR 92.45700000000001 6.1266e-05 1963000.0 1119.9 1282.4 1106.5 949.89 1526.1 1392.9 1233.1 1234.6 1770.4 1586.2 1655.4 True False 1308.9117410737585 1347.6686824267308 1263.4183383158036 1182.6130926421822 1301.6127116124462 1540.2957534678108 1457.1383084950658 1409.6083308039279 1369.4072267478598 1227.8763183362555 1244.31849328424 1.0519105423074053 1.0830576654612836 1.015349643306475 0.9504102840429597 1.046044657085329 1.2378629440782252 1.1710332333397309 1.1328356352588023 1.1005279067527656 0.9867862006096307 1.0 10.281140086747811 -4.980585496079306 12.440026852489261 1.0667850534037329 1.0260783806574907 0.0009130753116910473 0.0816757998444768 1170341.3507651864 19748011.434465565 0.011957792284455673 844455.8906242669 1.0457178081018729e-05 4.980585496079306 -0.04070667274624218 ATS(ph)FEESER ddPTM_A549_MK2206_60min_R1 2 ATSFEESER 9 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 ATS(1)FEESER;AT(0.003)S(0.997)FEESER 250.92 6.027499999999999e-55 45736000.0 4139.200000000001 8774.0 5693.1 4043.7000000000003 7348.200000000001 5603.7 3292.8 6268.8 6654.8 7296.8 7226.200000000001 True False 4837.79576627601 9220.55912321595 6500.467186503124 5034.406681528592 6267.289514101678 6196.6798145649855 3891.0591373064212 7157.421597394834 5147.4984255318905 5648.44781215231 5431.735107025846 0.8906538465063241 1.6975347548317168 1.19675703222252 0.926850551864483 1.1538282686125576 1.140828794568737 0.7163565712682509 1.3177044639266087 0.9476711076859582 1.0398975098852206 1.0 12.40719740910877 -6.006072517798184 24.8633093337883 1.004777775331553 1.332357162899122 0.16992943722409726 0.22580811900148884 229.751981960483 940713.1898323322 0.027248693482678818 0.08088392578455425 9.861148120085374e-07 6.006072517798184 0.327579387567569 ATS(ph)FEESER ddPTM_A549_PD325901_60min_R1 2 ATSFEESER 9 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 AT(0.002)S(0.997)FEES(0.001)ER;AT(0.005)S(0.994)FEES(0.002)ER 181.87 5.717100000000001e-11 81965000.0 4873.2 4782.1 4859.2 4377.0 5555.1 5612.6 4450.0 4828.6 4241.8 4745.1 5118.0 True False 5367.92367653977 5185.10434978141 5188.974532743338 4647.35734911176 5164.928940054628 5566.892846451601 4619.347185133434 4732.289785036581 4063.531897256847 4445.493576196167 4488.518445675079 1.1959232743517059 1.1551928353502763 1.1560550759779509 1.0353878245927073 1.1506979424427464 1.240251747615205 1.0291474215917316 1.0543099782950403 0.9053169651496634 0.9904144608071358 1.0 12.132023608515722 -8.210655895955492 1.9478059264416767 0.9572581122860434 1.1479115491672842 0.6286860942217418 0.059714026120989736 0.1500569045027776 1.1133037144178881 0.01076899383696706 0.014098071243934349 6.156644882402762e-09 8.210655895955492 0.1906534368812408 ATS(ph)FSSAGEVPKPRPPSTR ddPTM_A549_MK2206_60min_R1 4 ATSFSSAGEVPKPRPPSTR 19 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8 O15231-3 ZNF185 Zinc finger protein 185 1 AT(0.001)S(0.864)FS(0.133)S(0.002)AGEVPKPRPPSTR;AT(0.04)S(0.956)FS(0.003)S(0.001)AGEVPKPRPPSTR;AT(0.036)S(0.928)FS(0.036)SAGEVPKPRPPSTR;AT(0.02)S(0.975)FS(0.004)S(0.001)AGEVPKPRPPSTR 185.92 3.5396e-44 305421000.0 8110.4 9712.400000000001 9770.3 10337.400000000001 18791.3 17101.8 15906.800000000001 16849.6 25313.5 25593.6 25463.1 True False 9479.237239757673 10206.719674985483 11155.87545490005 12870.063464063529 16027.124662684579 18911.501124743925 18796.859659045735 19238.082399735842 19580.032667353124 19811.98798447283 19139.9095241911 0.49526029513236625 0.5332689614903936 0.5828593620466199 0.6724202874520876 0.8373667933188375 0.988066380399631 0.9820767248292483 1.0051292235953706 1.0229950482579735 1.0351139831372913 1.0 14.224296389660257 -6.750324776371508 1.1775293336267987 1.011285297190387 0.5114848786446803 0.9938978591656885 0.016198702728058567 0.02292426660074614 0.062139456166972015 0.0024264371249131654 0.0072406653752717055 1.7769500649481277e-07 6.750324776371508 -0.49980041854570667 down ATS(ph)FSSAGEVPKPRPPSTR ddPTM_A549_PD325901_60min_R1 3 ATSFSSAGEVPKPRPPSTR 19 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8 O15231-3 ZNF185 Zinc finger protein 185 1 AT(0.004)S(0.895)FS(0.1)SAGEVPKPRPPSTR;AT(0.015)S(0.949)FS(0.029)S(0.007)AGEVPKPRPPSTR;AT(0.008)S(0.984)FS(0.008)SAGEVPKPRPPSTR 199.7 3.1050999999999997e-55 363065000.0 23805.2 23821.8 23793.8 26089.7 29138.7 27093.0 27952.7 29038.2 29892.6 28498.0 32206.5 True False 26221.886379537984 25829.34668861437 25408.590351742758 27701.20151499224 27092.09823505782 26872.36359065551 29016.455294804342 28459.010320972786 28636.317976316655 26698.63141650091 28245.304673824627 0.9283626670820876 0.9144651469293881 0.8995686414134985 0.9807365094795166 0.9591717472307707 0.9513922367266429 1.027301904861177 1.0075660591951838 1.0138434797219371 0.9452414029452108 1.0 14.785723442235323 -6.894280578609566 0.8231623297974165 1.0079024066135402 0.9125930691529887 0.5376414369077163 0.0277526054136603 0.22923792776711663 0.28909444106044346 0.0034710014774163474 0.01188446057012219 1.2756144240303485e-07 6.894280578609566 -0.09530933746055159 ATS(ph)NVFAMFDQSQIQEFK ddPTM_A549_PD325901_60min_R1 2 ATSNVFAMFDQSQIQEFK 18 0 J3QRS3;P19105;O14950;P24844;P24844-2;J3KTJ1 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 1 AT(0.439)S(0.556)NVFAMFDQS(0.005)QIQEFK;AT(0.186)S(0.806)NVFAMFDQS(0.008)QIQEFK 50.202 0.0043827 4735600.0 3788.7 4611.3 3784.3999999999996 4501.5 5201.0 4635.5 4476.9 4652.9 4101.7 4640.4 5121.8 True False 4173.326034906473 4999.910434358758 4041.2321414458916 4779.547431351745 4835.699702475943 4597.750024895126 4647.270879353679 4560.094259370565 3929.3198130459746 4347.40435206438 4491.851069765262 0.9290882467135237 1.1131069033016818 0.8996807949950756 1.064048508536486 1.0765494285919524 1.0235757939177175 1.0346003923938065 1.0151926652387586 0.8747662716367209 0.9678424962320866 1.0 12.133094379704033 -8.622563497290487 9.829744815110125 0.9408970510243299 1.0231598819548118 0.196533953591288 0.06426864907891637 0.336164863724866 30.51697918515773 0.01143350571794209 0.012963265343512751 2.3847151057527877e-09 8.622563497290487 0.08226283093048192 ATS(ph)PEAGGGGGALK ddPTM_A549_MK2206_60min_R1 1 ATSPEAGGGGGALK 14 0 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 AT(0.09)S(0.91)PEAGGGGGALK 141.37 6.4336e-13 9089900.0 4348.5 4914.4 4284.7 4218.5 6530.7 4630.7 4795.5 4646.4 7291.5 6432.8 7394.8 True False 5082.4204893823035 5164.521968900439 4892.334888551038 5252.032689375665 5570.042681165981 5120.717600390116 5666.780276042564 5305.0414290032195 5639.986892132862 4979.6260122263675 5558.4670739025605 0.9143564982591453 0.9291270237343449 0.8801590120990254 0.944870702578121 1.0020825179153743 0.9212463674440543 1.0194861642067725 0.9544072778465857 1.0146658812846159 0.8958631842232372 1.0 12.44047135289808 -6.975598420686272 0.5904271487359554 1.0061446514956478 0.9009854940071247 0.09429415935808139 0.044956986807897024 0.4755403174258738 0.28738950327011614 0.00590199834024199 0.023735955462868358 1.0577951691691315e-07 6.975598420686272 -0.10515915748852311 ATS(ph)PEAGGGGGALK ddPTM_A549_PD325901_60min_R1 2 ATSPEAGGGGGALK 14 0 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 AT(0.001)S(0.999)PEAGGGGGALK;AT(0.026)S(0.974)PEAGGGGGALK 167.05 2.0952000000000002e-20 25271000.0 10972.400000000001 11956.4 11807.7 10281.900000000001 13996.2 12024.1 12708.4 11845.1 12399.0 13579.4 16386.7 True False 12086.309970546046 12964.007788989456 12609.041527468202 10916.98961111086 13013.155196268744 11926.179716177645 13192.02511630331 11608.84018819881 11877.913148683967 12721.99436652509 14371.2397838499 0.8410067713245165 0.9020799864155171 0.8773802202951189 0.7596414627622555 0.9054998310509478 0.8298643607338622 0.9179462116503152 0.8077827913806422 0.8265058079423404 0.885239865026941 1.0 13.81089690570508 -10.762611296450288 0.9304489889382339 1.0032413581198043 0.8519384511949224 0.1915436214050139 0.05565292123677161 0.3167495801516672 0.4702973207598984 0.03304592244515754 0.007724406604438362 1.7273832480578078e-11 10.762611296450288 -0.1513029069248819 ATS(ph)PESTSR ddPTM_A549_MK2206_60min_R1 2 ATSPESTSR 9 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 AT(0.078)S(0.921)PES(0.001)TSR;AT(0.067)S(0.933)PESTSR 167.69 2.2890000000000002e-07 585660000.0 12848.3 13861.8 11298.6 8171.3 6933.799999999999 6337.1 5668.0 6488.0 7564.0 18138.1 18879.6 True False 15016.778929224025 14567.306411465108 12900.91137577492 10173.268866823597 5913.847205149317 7007.687715773467 6697.802232219628 7407.693868666684 5850.766077225945 14040.690612542452 14191.274269547628 1.0581698756571711 1.026497419102412 0.9090735004296524 0.7168678917476723 0.4167241850747369 0.4938025706973282 0.471966231150371 0.52198933851645 0.4122791206833922 0.9893889967775265 1.0 13.792716517913256 -6.155057155670963 2.535032455495761 0.6447778899002793 1.03624552610097 0.4244252800274495 0.19580757013309374 0.28507731545266696 3.528369324875503 0.035378728729981615 0.11373155144217008 6.997498987997542e-07 6.155057155670963 0.3914676362006907 ATS(ph)PESTSR ddPTM_A549_PD325901_60min_R1 2 ATSPESTSR 9 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 AT(0.004)S(0.996)PESTSR;AT(0.069)S(0.931)PESTSR 191.25 1.414e-11 1399420000.0 10459.5 9095.8 8624.4 8111.700000000001 9525.2 8370.2 7160.9 7301.400000000001 8690.3 10172.0 11086.1 True False 11521.340740123067 9862.334987712873 9209.703646730255 8612.74128599266 8856.182812156088 8302.035866330962 7433.411968094834 7155.767849162509 8325.0769123323 9529.738184035625 9722.57998057805 1.1850085844640255 1.0143742717893809 0.9472489467947476 0.885849363358037 0.9108881418149619 0.8538922675786895 0.7645513827547743 0.7359947527772426 0.8562621165331199 0.9801655736514744 1.0 13.247123482370808 -5.224301179220846 1.2725981447916286 0.8950419230712173 1.3322698247464468 0.5899316786423948 0.07664577324382148 1.0531381919827878 1.3448292015897392 0.013675713384485408 0.6122849226660289 5.966213916474753e-06 5.224301179220846 0.4372279016752295 ATS(ph)PGPTDLETR ddPTM_A549_PD325901_60min_R1 1 ATSPGPTDLETR 12 0 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 AT(0.055)S(0.945)PGPTDLETR 118.61 1.922e-05 3423600.0 462.93 583.75 674.21 556.34 391.37 608.57 482.25 472.44 636.21 668.11 678.23 True False 509.9263128089463 632.9446611708034 719.9659449540843 590.7038582601863 363.8815213532031 603.6140076907407 500.6022876473256 463.0168135779899 609.4723061798718 625.9254205796341 594.8120096542025 0.8572898739979965 1.064108745112207 1.2104092272323836 0.9930933617221271 0.6117588674188804 1.014797949425492 0.8416142907712199 0.778425462268604 1.0246469410296408 1.0523079736461938 1.0 9.216289966441527 -5.221394426623962 21.021025909017578 0.9755682328392885 0.8572873954908544 0.024921888957829874 0.154595257192511 6893.158686896648 3617874.6370903905 0.02104898556093831 5.716209289910762 6.006279988327808e-06 5.221394426623962 -0.11828083734843409 ATS(ph)PKELGCDR ddPTM_A549_MK2206_60min_R1 1 ATSPKELGCDR 11 1 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 AT(0.179)S(0.821)PKELGCDR 66.331 0.0014517000000000002 53861000.0 6472.5 6155.5 7204.8 5008.9 7004.6 5732.2 4931.7 4571.3 7663.6 9446.7 9760.6 True False 7564.8997625679995 6468.788657733737 8226.54897776566 6236.080724858065 5974.232618937512 6338.777599273593 5827.726053041209 5219.295774019113 5927.8068362544645 7312.6839089819105 7336.773641144227 1.031093520473966 0.8816939126289957 1.121276105839169 0.8499758926575659 0.8142860760258896 0.8639734451838712 0.7943172759698675 0.7113884153041858 0.807958256066624 0.9967165768850734 1.0 12.840930059553877 -6.29944814292218 24.986867237119725 0.8719470842517157 0.9983885474411989 0.33265372881746136 0.09607040203594795 621.6893643802325 408695.94839091087 0.015361434796538249 0.03569732896025402 5.018244959811664e-07 6.29944814292218 0.12644146318948313 ATS(ph)PKELGCDR ddPTM_A549_PD325901_60min_R1 3 ATSPKELGCDR 11 1 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 AT(0.186)S(0.814)PKELGCDR;AT(0.022)S(0.978)PKELGCDR;AT(0.203)S(0.797)PKELGCDR 127.07 5.6868e-08 214121300.0 22934.8 22426.7 22596.5 23716.5 22627.7 25718.0 25984.3 24873.9 24221.7 24564.3 28179.9 True False 25263.124012292596 24316.676715510508 24130.03437379299 25181.414340920513 21038.40841332721 25508.56113477573 26973.14675565456 24377.770551302943 23203.7461822307 23013.305905830322 24713.95094710418 1.0222211764668394 0.983925102366515 0.9763729978035095 1.018914960008493 0.8512766112693266 1.0321522928232831 1.0914137854115593 0.9863971407679505 0.9388926210905815 0.9311868407882744 1.0 14.593038048093428 -8.706093050236628 0.0016474975689805226 0.2236668706179958 1.7393328184621337 0.01269368773211832 0.059383132138930164 366667.56585770467 492.2955614509243 226519.75414775452 226375.08106370328 1.967464703254601e-09 8.706093050236628 1.5156659478441379 ATS(ph)PLVSLYPALECR ddPTM_A549_MK2206_60min_R1 2 ATSPLVSLYPALECR 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AT(0.013)S(0.987)PLVSLYPALECR;AT(0.046)S(0.954)PLVSLYPALECR 165.64 3.0152e-20 8880700.0 2151.7 2283.47 2575.0 1838.39 3052.3 3259.2 2380.8999999999996 2333.5 3558.2 3598.5 3489.3 True False 2514.8543559857203 2399.688869511046 2940.173719984815 2288.795632528464 2603.3107133573603 3604.0863807181327 2813.478711131214 2664.2807710440366 2752.2733812778088 2785.59635073321 2622.8105102191007 0.9588395144015333 0.914930323849657 1.1210011964376347 0.872650015550405 0.9925653047424644 1.3741314390329553 1.0726961403308488 1.015811382737471 1.049360360023833 1.062065421760305 1.0 11.356897865866875 -7.016824589055028 24.95702902283499 1.0546321454664291 0.96896309432292 0.1840590723626765 0.11377597427657134 1299.8685209653602 1928182.7161245209 0.017120785909974318 0.030155868669914633 9.620007507090884e-08 7.016824589055028 -0.08566905114350909 ATS(ph)PRPR ddPTM_A549_PD325901_60min_R1 1 ATSPRPR 7 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 AT(0.033)S(0.967)PRPR 47.574 0.016493 19281000.0 1574.9 1141.9 1168.8 1297.9 957.9 1263.1 906.16 1152.6 1110.3 1122.4 1460.5 True False 1734.7826886198973 1238.131920498398 1248.1217965653634 1378.0683352552323 890.6204085756019 1252.81373237947 940.6444146697778 1129.6104888027924 1063.6379521722565 1051.5314724500179 1280.8677588723046 1.3543807911499202 0.966635245459272 0.9744345487033171 1.0758865040591736 0.6953258073727436 0.9780976402142139 0.7343805854696002 0.8819103150799256 0.8304041887264767 0.8209524091509666 1.0 10.322905819305454 -2.2835296172886075 0.9745196100445315 0.8997953263513954 199.99999999891773 0.6023963163714543 0.1090099660699577 395.9411622881872 1.0890090757557789 0.01623921698423974 175214.69557510232 0.005205595073445157 2.2835296172886075 199.10020467256632 ATS(ph)PTQSTSSWQK ddPTM_A549_MK2206_60min_R1 4 ATSPTQSTSSWQK 13 0 P98088 P98088 MUC5AC Mucin-5AC 1 ATS(0.985)PT(0.015)QSTSSWQK;AT(0.034)S(0.879)PT(0.085)QS(0.001)TSSWQK;AT(0.009)S(0.989)PT(0.001)QSTSSWQK;ATS(0.863)PT(0.136)QSTSSWQK 182.07 4.4358e-25 95495000.0 13905.2 14126.0 9487.6 10795.2 20151.100000000002 14675.6 13992.399999999998 12991.2 23234.4 21498.4 20629.9 True False 16252.05781049989 14844.953062975674 10833.084343972 13440.024484614944 17186.899884000766 16228.562251125146 16534.637959440715 14832.742383881416 17971.84549771266 16641.89650871275 15506.92647372511 1.0480515167230158 0.9573111143674355 0.6985964860494789 0.8667110473108698 1.1083369688456444 1.0465363512635966 1.0662743508494064 0.9565236804994187 1.158956001252995 1.0731911663417462 1.0 13.920625147127915 -6.756663883039533 24.99722931768802 1.0666068575612015 0.8834226893647742 0.42346192466768484 0.09257577277085885 89.13786311573814 466584.13010767323 0.014381183779784212 0.029193886910551362 1.7512014854975536e-07 6.756663883039533 -0.18318416819642735 ATS(ph)PTQSTSSWQK ddPTM_A549_PD325901_60min_R1 2 ATSPTQSTSSWQK 13 0 P98088 P98088 MUC5AC Mucin-5AC 1 AT(0.009)S(0.99)PT(0.001)QSTSSWQK;AT(0.001)S(0.999)PTQSTSSWQK 223.06 5.163099999999999e-46 196987000.0 67034.0 58824.0 52891.0 66844.0 59592.0 58154.0 47246.0 45668.0 87839.0 70597.0 86467.0 True False 73839.24233217744 63781.30492284593 56480.50131942047 70972.80206626155 55406.463501239414 57680.41310489723 49043.97238400319 44757.11591414708 84147.43229835067 66139.49337184068 75832.10715947374 0.9737200388866244 0.8410857526181468 0.7448098626699488 0.9359202153911779 0.7306464975939608 0.7606331310772654 0.6467441591839783 0.5902132696909445 1.1096544122318786 0.8721832459798374 1.0 16.210521191432505 -8.779291931363383 24.99976527349368 1.051781274809841 0.7777052634836187 0.3620395627887246 0.12122450600071641 130.54173206754743 182803.0093222458 0.019858142534872426 0.021161973538191582 1.6622948854214576e-09 8.779291931363383 -0.2740760113262223 ATS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 ATSPVK 6 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AT(0.006)S(0.994)PVK;AT(0.071)S(0.929)PVK 106.94 0.027106 101719000.0 10589.1 9341.900000000001 7632.099999999999 5732.200000000001 22882.8 21144.1 19110.8 23858.3 20116.4 11137.2 11724.099999999999 True False 12376.281201360955 9817.362807518937 8714.446543027603 7136.589257328238 19516.77043266185 23381.554627682337 22582.984985797975 27240.287087979406 15560.067519289794 8621.298784878678 8812.682401301054 1.404371635988356 1.1140039275748277 0.9888528992876281 0.8098089698857902 2.214623146952454 2.653171141652673 2.5625551855203534 3.0910324288956343 1.7656448752757272 0.9782831596888002 1.0 13.105365497682632 -6.750373130316376 24.995655134232457 1.7433175563532894 1.075283491233661 0.26257422816991927 0.6649327816225921 356.40513017391055 805017.0157854579 0.11540079381562675 0.23845346672574902 1.7767522319892425e-07 6.750373130316376 -0.6680340651196284 ATS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 ATSPVK 6 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AT(0.068)S(0.932)PVK;AT(0.069)S(0.931)PVK 92.47 0.036699 110129000.0 23081.0 21460.2 18964.4 18653.9 21868.0 16268.7 11687.4 17077.8 18457.2 21085.0 25081.0 True False 25424.166128665845 23268.726368578464 20251.438226201382 19806.10903691932 20332.067120504496 16136.213101070296 12132.170402590678 16737.169881725065 17681.508070641954 19753.689501611392 21996.196001558535 1.1558437707531075 1.0578522925932177 0.9206791130960313 0.900433376549107 0.9243446966495421 0.7335910763809782 0.5515576603214054 0.7609120177206621 0.8038439041636625 0.8980502583361119 1.0 14.424966426744614 -5.597557634175934 1.238152811344463 0.8560053132166628 1.2084797261860354 0.4658048052775299 0.11571253483563874 0.8015026041807936 1.5234843712710364 0.021125992459651053 0.30697534048658304 2.526052461541991e-06 5.597557634175934 0.35247441296937254 ATS(ph)PVKSTTSITDAK ddPTM_A549_MK2206_60min_R1 4 ATSPVKSTTSITDAK 15 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AT(0.041)S(0.946)PVKS(0.004)T(0.008)T(0.001)SITDAK;AT(0.128)S(0.872)PVKSTTSITDAK;AT(0.116)S(0.856)PVKS(0.013)T(0.013)T(0.002)SITDAK;AT(0.014)S(0.986)PVKSTTSITDAK 204.6 1.5935999999999997e-39 289773400.0 48403.119999999995 60726.4 61260.1 59138.8 89096.5 64099.9 63521.100000000006 55947.4 103867.0 79800.9 84622.0 True False 56572.38331333341 63817.11437657412 69947.70334122014 73627.80865484163 75990.52287541995 70882.90887192998 75062.06163956357 63878.11528172659 80341.290341516 61773.82126586793 63608.021951612354 0.8893907022665936 1.0032872021255563 1.0996679537437979 1.1575239473859364 1.194668856912846 1.1143705887576845 1.1800722508972923 1.0042462148928275 1.2630685230651082 0.9711640036984686 1.0 15.95692110260621 -5.519564370910125 1.9549350227511404 1.1283405297946425 0.8743428194463116 0.3628500589674071 0.0869272626417962 0.39040522930700955 2.2565593773442094 0.013680594755299187 0.1470591687824777 3.02298247235897e-06 5.519564370910125 -0.25399771034833085 ATS(ph)PVKSTTSITDAK ddPTM_A549_PD325901_60min_R1 4 ATSPVKSTTSITDAK 15 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AT(0.016)S(0.975)PVKS(0.008)TTSITDAK;AT(0.086)S(0.914)PVKSTTSITDAK;AT(0.02)S(0.98)PVKSTTSITDAK;AT(0.119)S(0.881)PVKSTTSITDAK 199.99 3.9038999999999997e-39 423283900.0 36918.1 38892.4 49500.1 50777.399999999994 45389.799999999996 63814.700000000004 56393.8 58716.8 56018.6 51870.9 50460.4 True False 40665.99833433122 42169.99904088965 52859.47445428227 53913.80467415748 42201.77703430928 63295.014240896344 58539.896918871484 57545.647361561525 53664.33305192902 48595.76252165684 44254.09069483054 0.9189206623802925 0.9529062371134802 1.1944539730528674 1.2182784422334842 0.9536243174744296 1.430263581221657 1.3228132360136757 1.300346396413103 1.2126411865965132 1.0981078078581663 1.0 15.433523198640554 -5.726225623118778 7.487968085795002 1.155199412513216 0.9333450971371902 0.3201841469911393 0.1355654598527399 0.23056944959550424 38.22599460487038 0.021179165448481644 0.08119829504954218 1.878340734407263e-06 5.726225623118778 -0.22185431537602573 ATS(ph)TATSGFAGAIGQK ddPTM_A549_MK2206_60min_R1 2 ATSTATSGFAGAIGQK 16 0 E7ER27;A0A2R8YD50;P51659-3;P51659;A0A2R8Y7L2;E7ET17;P51659-2;E7EPL9 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 1 ATS(0.818)T(0.182)ATSGFAGAIGQK;AT(0.003)S(0.984)T(0.013)ATSGFAGAIGQK 290.39 4.142899999999999e-124 15252000.0 4821.200000000001 5041.6 4759.5 4290.9 6796.1 5305.799999999999 4516.5 4900.700000000001 8178.9 7789.6 7546.4 True False 5634.90069297688 5298.195905585316 5434.468668065131 5342.170692625822 5796.4026927392315 5867.2562342950005 5337.089587477056 5595.389232764308 6326.392209019472 6029.923949887846 5672.420609955414 0.9933855544998401 0.9340273350475258 0.9580510758541664 0.9417797197989893 1.0218569974458915 1.0343478803383583 0.9408839637367805 0.9864200166934181 1.1152896874248537 1.0630248291716933 1.0 12.469748797034777 -8.604590723053098 9.436156931868839 1.0543910856505816 0.9746641744995356 0.46995388668183635 0.03935047968642784 0.2637389862242264 28.149280672623874 0.008543401875671987 0.009686942267720187 2.4854743005025493e-09 8.604590723053098 -0.07972691115104602 ATS(ph)TATSGFAGAIGQK ddPTM_A549_PD325901_60min_R1 2 ATSTATSGFAGAIGQK 16 0 E7ER27;A0A2R8YD50;P51659-3;P51659;A0A2R8Y7L2;E7ET17;P51659-2;E7EPL9 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 1 AT(0.005)S(0.976)T(0.018)ATSGFAGAIGQK;AT(0.003)S(0.83)T(0.156)AT(0.01)SGFAGAIGQK 278.33 7.224499999999999e-107 20790000.0 6683.5 7324.2 7764.4 8155.0 7384.4 7320.2 7987.6 8719.3 9019.3 8412.900000000001 9479.2 True False 7362.003999867348 7941.43603828214 8291.338875130139 8658.715828651224 6865.745218797025 7260.586718204575 8291.57248898243 8545.386721341472 8640.250186460622 7881.708058245502 8313.318493599689 0.8855674187793064 0.955266665699882 0.9973560957051661 1.0415474681160661 0.8258729921249702 0.8733680447578668 0.997384196860255 1.0279152336002102 1.039326256189106 0.9480820522290253 1.0 13.021208768707675 -7.95440849430325 9.960435677808976 1.0194557191980003 0.934405498004239 0.25161096764102764 0.0600810484019578 0.3810068407773039 80.39381871686322 0.009202914399079077 0.012715593961657942 1.1106865319484348e-08 7.95440849430325 -0.08505022119376127 ATSACAPIS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 ATSACAPISSPK 12 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 ATSACAPIS(0.574)S(0.426)PK 128.67 8.515700000000001e-08 5228700.0 2766.0 3193.6 2791.5 2696.3 2808.6 2688.5 2923.9 3076.3 2921.7 3085.6 4016.9 True False 3046.8022837784224 3462.7358799401754 2980.947976653157 2862.844327258406 2611.333625143997 2666.6057473693336 3035.170614519474 3014.940783189338 2798.911109485436 2890.7746894082106 3522.8467652270847 0.8648693760547441 0.9829368436117503 0.8461758842528035 0.8126508241904372 0.741256659506071 0.7569462781323794 0.861567594843662 0.8558251278337942 0.7945026553844492 0.8205791741900729 1.0 11.782526007336315 -10.826781265527764 0.9668655266898349 1.004463575045084 0.8330069424617275 0.0 0.08033284947778149 0.4306327502135962 0.6835175240529398 0.05304483973541942 0.01178373927816535 1.49011139040338e-11 10.826781265527764 -0.17145663258335664 ATSACAPISS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ATSACAPISSPK 12 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 ATSACAPIS(0.018)S(0.982)PK;ATSACAPIS(0.011)S(0.989)PK 147.71 3.7169e-17 4172100.0 3263.3 3726.2 3281.2 3125.3 3895.4 3089.9 3455.4 2810.8 4373.4 4464.6 4996.8 True False 3814.065259974996 3915.8476641129773 3746.523499034628 3890.998640300048 3322.3918202051777 3416.871167090381 4083.2014525779337 3209.2395077139818 3382.831882884708 3456.043759200638 3755.9566553356863 1.0154710530423083 1.0425699824171695 0.9974884810537796 1.0359540850325102 0.8845660706668195 0.9097206066625921 1.0871268833140995 0.8544399742086901 0.9006578598501876 0.9201500646422546 1.0 11.874964698693956 -6.733878383108985 24.977518242136163 0.9475132499326996 1.0224649825859498 0.30875913518438824 0.060680372389501296 249.4137695824584 226033.26627312507 0.009063514230708277 0.018863725015024015 1.8455321571742532e-07 6.733878383108985 0.07495173265325017 ATSACAPISS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ATSACAPISSPK 12 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 ATSACAPIS(0.091)S(0.909)PK 161.99 4.4307e-14 5475200.0 3562.6 3718.6 3680.8 3510.2 4278.2 3545.5 3351.3 3442.0 3724.9 4025.1 5151.9 True False 3924.2725293524954 4031.9794724278363 3930.6012224484853 3727.0170817573894 3977.713990988764 3516.6266235067797 3478.8355554017253 3373.346609803238 3568.355406688675 3770.9544990721342 4518.248960584884 0.8685383571348183 0.892376561716931 0.8699390531015961 0.8248808585516566 0.880366271466779 0.7783162579539563 0.7699521619435934 0.746604854940654 0.7897651142770924 0.8346052933267287 1.0 12.141548051697988 -10.747110784422043 1.0250843900868198 0.9988765870956254 0.823332508256084 0.05921867420271121 0.06660976504506998 0.2849563166635435 0.5371497754904349 0.035513255606341054 0.009334487951639017 1.7901491456409956e-11 10.747110784422043 -0.17554407883954148 ATSDTLES(ph)PPK ddPTM_A549_MK2206_60min_R1 1 ATSDTLESPPK 11 0 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ATS(0.001)DT(0.027)LES(0.972)PPK 94.191 0.00028832 4506600.0 3108.1 3699.3 3646.2 3059.3 5062.6 4341.5 3922.8 3806.0 5652.4 4891.0 5021.5 True False 3632.6712942506924 3887.5785690121706 4163.285987498496 3808.8286373371952 4317.89824638567 4800.91464834554 4635.521982454334 4345.512155386158 4372.14042502802 3786.1197030529743 3774.5229636503677 0.9624186497828352 1.029952289719935 1.1029965978726364 1.009088744198194 1.1439586639075048 1.271926199570009 1.2281080356632108 1.151274531175082 1.1583292689256002 1.00307237219492 1.0 11.882078608182265 -6.7580298790437565 24.997877540591226 1.1132122679862806 1.0318798319627798 0.2576103459018072 0.08430151135938509 148.648939522416 1089854.115100011 0.014508134357704938 0.02926629278738258 1.745702046162731e-07 6.7580298790437565 -0.08133243602350082 ATSDTLES(ph)PPKIIPK ddPTM_A549_PD325901_60min_R1 2 ATSDTLESPPKIIPK 15 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ATSDT(0.003)LES(0.997)PPKIIPK;ATSDTLES(0.999)PPKIIPK 123.14 9.7699e-08 86020000.0 9040.599999999999 8570.4 10743.0 9057.400000000001 11636.5 9948.2 11166.3 11200.1 10237.900000000001 10161.3 11806.8 True False 9958.395056662042 9292.657685821412 11472.084582906999 9616.85502715213 10819.192383745685 9867.1851575152 11591.239656933809 10976.705219191526 9807.63666625628 9519.713783861689 10354.63844947177 0.9617327640416126 0.8974391265486886 1.1079174457793102 0.9287485095766645 1.044864331723491 0.952924161057363 1.1194248561643525 1.0600761458505092 0.9471732609608021 0.9193670865782211 1.0 13.337989559736515 ATSEEDVS(ph)IKSPICEK ddPTM_A549_MK2206_60min_R1 1 ATSEEDVSIKSPICEK 16 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ATSEEDVS(0.761)IKS(0.239)PICEK 155.86 9.305e-21 48551000.0 11932.0 13427.0 11393.0 11101.0 16040.0 14175.0 12974.0 15132.0 17402.0 16227.0 16658.0 True False 13945.829890608178 14110.376948646066 13008.698715257078 13820.74549834283 13680.537248059522 15674.989091396523 15331.20786182384 17277.007339806445 13460.474785283704 12561.309429859053 12521.358862588433 1.1137632938766582 1.1269046038449815 1.0389206840900256 1.1037736119549078 1.092576085246986 1.2518600627469092 1.2244044779860699 1.3798029055318455 1.0750011187285096 1.003190593585652 1.0 13.612103516735125 -8.9828955333313 19.45328299452431 1.0330865035349264 1.165289182493814 0.3360787211051284 0.08952521567245622 9.05384661725 10298.484540386871 0.017238707491370523 0.01752462910720648 1.04017034184319e-09 8.9828955333313 0.1322026789588877 ATSEEDVS(ph)IKSPICEK ddPTM_A549_PD325901_60min_R1 1 ATSEEDVSIKSPICEK 16 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ATSEEDVS(0.696)IKS(0.304)PICEK 142.85 8.097499999999999e-15 72510000.0 28934.0 30435.0 30894.0 30188.0 32417.0 29722.0 29149.0 31456.0 27178.0 30673.0 35532.0 True False 31871.35837991499 32999.86426164178 32990.65262071385 32052.64419807765 30140.141752578842 29479.95388629769 30258.28114594484 30828.58540324538 26035.803174040862 28736.30154531306 31161.789255905984 1.0227704872201626 1.0589848994433921 1.0586892925110598 1.0285880549045439 0.9672147354910465 0.946028921645135 0.9710058975580195 0.989307293945021 0.8355041156408048 0.9221646841048055 1.0 14.927490452374984 -6.947368961953355 1.0822787117785682 0.9284602878987533 1.052685418568087 0.5267043704857415 0.04285932371064482 0.38668298125601464 0.8862301564310571 0.010165097216203697 0.027481788134843577 1.1288364857519e-07 6.947368961953355 0.1242251306693336 ATSEEDVSIKS(ph)PICEK ddPTM_A549_MK2206_60min_R1 1 ATSEEDVSIKSPICEK 16 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ATSEEDVS(0.003)IKS(0.997)PICEK 156.87 8.4953e-21 48289000.0 8026.8 10154.0 8137.7 8693.2 11409.0 10836.0 8480.5 11187.0 10866.0 12536.0 11055.0 True False 9381.527603581433 10670.795228759374 9291.748225677833 10823.034390252573 9730.751213410915 11982.658327645338 10021.29707662996 12772.791508750635 8404.868349436425 9704.10889336988 8309.738397521614 1.12897989741524 1.28413130694246 1.118175781375874 1.3024518790483888 1.171005722191341 1.4420018723115489 1.2059702239987267 1.5370870775619279 1.0114480080315384 1.1677995659001896 1.0 13.020587344264333 -8.935752678707116 24.99783555052493 1.0050501343420488 1.2700533021645954 0.32873488794350736 0.1298669382784258 32.80943244776972 12765.562136729332 0.019159836717656593 0.02039705364249768 1.1594374426743254e-09 8.935752678707116 0.2650031678225466 ATSEEDVSIKS(ph)PICEK ddPTM_A549_PD325901_60min_R1 1 ATSEEDVSIKSPICEK 16 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ATSEEDVS(0.241)IKS(0.759)PICEK 106.69 2.1809999999999997e-07 67218000.0 14730.0 14385.0 15581.0 14779.0 17279.0 14823.0 15687.0 15130.0 13779.0 15688.0 17236.0 True False 16225.37875634713 15597.274434161884 16638.420356164384 15691.86526445573 16065.382649313946 14702.286402549986 16283.977369255776 14828.220280744614 13199.916547763238 14697.457002669178 15116.081268006192 1.0733852556541101 1.0318331952325606 1.1007099036560677 1.0380908243506344 1.0628007593024118 0.9726255199267803 1.077261830003619 0.9809566393460157 0.8732366751494915 0.9723060323694442 1.0 13.883796559586658 -8.464566036074958 5.238665471835686 0.9394666780928611 1.0484491912979885 0.5391397255317574 0.04234679508264091 0.13798045558622 7.947616625620505 0.008751218649446462 0.010507192966045905 3.4311046462044637e-09 8.464566036074958 0.10898251320512742 ATSEVPGS(ph)QASPNPVPGDGLHR ddPTM_A549_MK2206_60min_R1 1 ATSEVPGSQASPNPVPGDGLHR 22 0 Q96GM8;Q96GM8-2 Q96GM8 TOE1 Target of EGR1 protein 1 1 AT(0.003)S(0.003)EVPGS(0.555)QAS(0.44)PNPVPGDGLHR 44.81100000000001 0.011023999999999999 6670600.0 1085.1 1279.2 1118.4 976.41 1309.6 1216.1 1289.2 1283.5 1819.3 1584.6 1779.9 True False 1268.2383518520728 1344.3058160950354 1277.0059372547632 1215.6304938327103 1116.9595748166298 1344.7868948181526 1523.4309523249033 1465.4400555538969 1407.2314548251136 1226.6377594475039 1337.901707259044 0.9479308868289805 1.0047866811150958 0.9544841226572333 0.9086097186639888 0.8348592192956702 1.0051462581456856 1.1386718053047054 1.0953271436928953 1.0518197616386222 0.9168369789739738 1.0 10.385756412854532 -7.5104468312356465 24.68691293945357 1.0407369080769557 0.9329948880210718 0.40213043248026203 0.0645044286401942 376.4939973817425 747630.5315644105 0.008941856081622256 0.013868338174156091 3.0871175647830464e-08 7.5104468312356465 -0.10774202005588396 ATSEVPGSQAS(ph)PNPVPGDGLHR ddPTM_A549_MK2206_60min_R1 1 ATSEVPGSQASPNPVPGDGLHR 22 0 Q96GM8;Q96GM8-2 Q96GM8 TOE1 Target of EGR1 protein 1 1 AT(0.014)S(0.014)EVPGS(0.062)QAS(0.91)PNPVPGDGLHR 40.454 0.028182 5513900.0 1397.4 1521.9 1025.8 1547.5 1761.1 1373.7 1433.8 1374.4 1680.3 2306.7 1900.7 True False 1633.24695685014 1599.358209439522 1171.2738648389986 1926.6375694699152 1502.0445229150628 1519.064022211739 1694.3029005921856 1569.2254089234723 1299.714732887726 1785.6148679272726 1428.7037333486498 1.143166997276667 1.1194470708709396 0.81981577950645 1.3485214075518577 1.0513337985017468 1.063246344748676 1.1859022000460615 1.0983560638183973 0.9097160611748424 1.2498146580341614 1.0 10.48049106411725 -8.747836990330747 23.865083798798384 0.957365923547335 1.1025878990352223 0.0 0.14866760457923078 137.8391522124721 241835.01919301707 0.01931270453325176 0.02183229695251033 1.7871582474497427e-09 8.747836990330747 0.1452219754878873 ATSFS(ph)SAGEVPKPRPPSTR ddPTM_A549_PD325901_60min_R1 1 ATSFSSAGEVPKPRPPSTR 19 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8 O15231-3 ZNF185 Zinc finger protein 185 1 AT(0.002)S(0.306)FS(0.692)S(0.001)AGEVPKPRPPSTR 184.2 4.2631999999999994e-44 197630000.0 5554.0 6118.0 5796.1 6340.6 5969.2 5964.4 5992.3 5646.3 5688.5 6845.1 7180.5 True False 6117.837991361301 6633.585331122869 6189.458200780718 6732.244461452598 5549.94398462207 5915.827903890518 6220.340255612378 5533.680117063338 5449.432127291616 6412.899217807929 6297.344020939801 0.9714949621647458 1.0533941466537329 0.9828680440832922 1.0690609309363877 0.8813150379219411 0.939416345084424 0.9877720249884123 0.8787323828367731 0.8653540459551319 1.0183498307356063 1.0 12.620527767917197 -6.761323897655661 24.999999995678397 0.9316154034561269 1.0190511723798337 0.3326677159433109 0.05425720705016784 2.801576928106113 606199.7763338314 0.008445835535043321 0.016738482535910648 1.7325114054836476e-07 6.761323897655661 0.08743576892370675 ATSS(ph)SSGSLSATGR ddPTM_A549_MK2206_60min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AT(0.001)S(0.072)S(0.852)S(0.072)S(0.003)GSLSATGR;ATS(0.006)S(0.912)S(0.072)S(0.009)GS(0.001)LSATGR 221.96 7.4438e-47 271300000.0 7294.0 9671.3 8567.9 9206.3 11399.8 8609.5 8297.3 8979.9 11889.900000000001 13358.8 12919.0 True False 8525.048878821326 10163.527860537773 9782.957054546749 11461.843913286504 9722.904521223749 9520.551575476431 9804.812008009172 10252.828324790371 9196.856634268743 10341.03780191046 9710.85575373874 0.8778885296014338 1.0466150582686549 1.0074248143146651 1.1803124466011785 1.00124075238996 0.9804029445922887 1.0096753835761856 1.0558110000596979 0.9470696370634375 1.0648945946837995 1.0 13.245382721117604 -8.764616970894068 24.980695461312763 0.9750051076424037 1.023459472194059 0.0 0.07364316072505385 148.17323156382645 1164871.1235500642 0.011649644052541595 0.012663561608431096 1.7194241770056784e-09 8.764616970894068 0.048454364551655416 ATSS(ph)SSGSLSATGR ddPTM_A549_PD325901_60min_R1 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AT(0.021)S(0.023)S(0.762)S(0.19)S(0.004)GSLSATGR 131.86 8.3317e-09 204320000.0 3697.9 3383.0 3376.8 3061.7 3506.8 4218.5 3603.4 4310.0 3652.8 3897.2 3512.6 True False 4073.3080857499012 3668.0972826395337 3605.9699543479787 3250.814255374793 3260.4944658032364 4184.145934639219 3740.5293588561417 4224.033668870409 3499.2855189541747 3651.1301268996863 3080.5724682059945 1.322256862251982 1.1907193615788207 1.170551899546111 1.0552630359862758 1.0584053773946833 1.3582364894262342 1.2142318992529595 1.3711846458623718 1.1359205326508752 1.1852115684932945 1.0 11.588982759055689 -9.682852440091969 1.1504459801016225 1.0264303126685042 1.2068014538511547 0.08711196841058133 0.11306398834903016 0.3493976822045747 0.9481777195575252 0.030199998697324423 0.02070456489760991 2.0756186290340865e-10 9.682852440091969 0.18037114118265052 ATSS(ph)TQSLAR ddPTM_A549_PD325901_60min_R1 1 ATSSTQSLAR 10 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 ATS(0.297)S(0.647)T(0.05)QS(0.006)LAR 92.943 0.00060949 14081000.0 3894.2 3453.4 3280.3 3531.5 4126.2 3960.0 3635.1 4199.0 4648.0 4460.2 4651.6 True False 4289.536317241477 3744.4301377083543 3502.92088404634 3749.6327343815815 3836.389946617232 3927.751072933816 3773.4357197030445 4115.247650948224 4452.660723855399 4178.582210817505 4079.482688921884 1.0514902609808858 0.9178688630979149 0.8586679123700568 0.9191441710401094 0.9404108900952597 0.9628061625558295 0.9249789758760514 1.0087670336544048 1.0914768031610738 1.024292178556054 1.0 11.994170503171405 -8.39944477055351 4.002186874384103 1.04348400469899 0.9357096609734237 0.46019482176728954 0.0481883578920276 0.15772266201764115 4.374675246418291 0.008906877479265251 0.010795287548682484 3.986164613450283e-09 8.39944477055351 -0.10777434372556627 ATSSS(ph)SGSLSATGR ddPTM_A549_PD325901_60min_R1 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATS(0.001)S(0.036)S(0.954)S(0.007)GS(0.001)LSATGR 157.43 5.226800000000001e-19 155950000.0 5991.2 5064.1 5788.7 4458.9 6936.2 6293.6 5364.3 6695.1 5765.7 6153.8 6248.6 True False 6599.422213511673 5490.8694794604935 6181.555992280905 4734.316126103362 6449.025240590968 6242.347008236432 5568.441371957597 6561.5609782956535 5523.387679761846 5765.2480177859225 5480.061813138981 1.2042605427714186 1.0019721796377552 1.1280084427989523 0.8639165556038764 1.176816149250142 1.1391015687578192 1.0161274748045208 1.1973516361738243 1.0079060908617832 1.0520406912132232 1.0 12.419976451024189 -8.95040077157722 24.999952413713686 1.0034876261595018 1.08480829473874 0.08763267458924906 0.09674516763406256 153.2317930108575 77234.92714924176 0.015318614697900192 0.01630540554039017 1.1209835213093299e-09 8.95040077157722 0.08132066857923825 ATSSSS(ph)GSLSATGR ddPTM_A549_MK2206_60min_R1 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSS(0.002)S(0.016)S(0.633)GS(0.349)LSATGR 112.42 7.1124e-06 32432000.0 930.76 976.59 908.32 838.59 768.61 933.59 805.82 1059.7 1175.3 1297.4 1295.0 True False 1087.8495331027873 1026.29425964685 1037.1334343054773 1044.044587645735 655.5484871715105 1032.3818741331133 952.2270632969702 1209.9157201951423 909.0964265684364 1004.3164389165674 973.4157598182264 1.1175589897023344 1.0543226255536462 1.0654578209203736 1.0725577196743739 0.6734516886124036 1.060576494391151 0.9782326346090667 1.242958836439097 0.9339240888581865 1.0317445847641826 1.0 9.926912322134662 -6.583442166465673 24.99999999999175 0.9760014394150591 1.0753829412200717 0.09622352776226728 0.1271130972256613 113.20371597916044 46728.704923309015 0.017421120377649774 0.036264955786585354 2.6095031986349594e-07 6.583442166465673 0.0993815018050126 ATSSSSGS(ph)LSATGR ddPTM_A549_MK2206_60min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSSSSGS(0.999)LSATGR;ATSS(0.003)S(0.079)S(0.331)GS(0.561)LS(0.024)AT(0.001)GR 225.32 5.4713e-47 47325000.0 2669.12 2687.88 2044.56 2770.37 3662.2 2418.35 2566.28 2685.8 4052.1 3742.0 4409.3 True False 3119.6022022812695 2824.6816111362764 2334.5093518183103 3449.1107743666344 3123.4952312870055 2674.2581918291903 3032.539857533629 3066.5203749175357 3134.30581987404 2896.679601068131 3314.349119510816 0.9412412783906452 0.8522583195922304 0.7043643465546786 1.0406600662744028 0.9424158767402332 0.8068728113421858 0.9149729700114451 0.9252255161852537 0.9456776298619533 0.8739814354547142 1.0 11.694509862616325 -8.983903884581409 0.3308094194249424 1.0109125174560412 0.8621478264681439 0.0 0.08889886459046892 1.3795144888999331 0.4368535919167323 0.07326705288490684 0.05496238814427759 1.0377580607201316e-09 8.983903884581409 -0.14876469098789724 ATSSSSGS(ph)LSATGR ddPTM_A549_PD325901_60min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSSS(0.007)S(0.201)GS(0.724)LS(0.069)ATGR;ATS(0.003)S(0.023)S(0.069)S(0.153)GS(0.635)LS(0.117)ATGR 166.05 7.3168e-20 77384000.0 6765.1 7112.8 7019.799999999999 7079.1 8508.8 7956.700000000001 7041.4 7250.200000000001 7908.5 7896.0 8496.599999999999 True False 7451.887971796606 7712.220618373775 7496.205841486602 7516.359929197408 7911.171241766442 7891.903273235482 7309.364330201929 7105.589073328128 7576.133247549568 7397.4452124602085 7451.572064385081 1.0000423947334596 1.034979001979256 1.0059898470706403 1.0086945230150806 1.0616781497125987 1.0590923908466203 0.9809157406042094 0.9535691276864133 1.0167160945486697 0.9927361835251419 1.0 12.863329108925955 -7.775531372353531 24.998191954026698 1.0013162167811336 1.0283077531818348 0.3397688994670407 0.024855864748378406 293.88118696175593 521323.3980395652 0.004154104882107031 0.005754975222145845 1.67675120703555e-08 7.775531372353531 0.026991536400701177 ATSSSSGSLSAT(ph)GR ddPTM_A549_MK2206_60min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSSSSGSLS(0.163)AT(0.836)GR;ATSSSSGSLS(0.001)AT(0.999)GR 109.44 1.3973e-05 8315500.0 1881.1999999999998 1690.48 1455.71 1750.4 2440.42 1901.7200000000003 1347.1599999999999 1738.8000000000002 2150.3 2066.62 2756.0 True False 2198.7005690757687 1776.5182113761232 1662.151567347221 2179.2480785784414 2081.4374508048268 2102.9587481404296 1591.92153407851 1985.2802248516703 1663.2604833234993 1599.7691066700743 2071.6091382695226 1.0613491360210978 0.8575547281376168 0.8023480571898164 1.051959097071194 1.00474428904263 1.0151329752759704 0.7684468583722747 0.9583276054236922 0.8028833492754675 0.7722350114782799 1.0 11.016536112265037 ATST(ph)SPNSQSSK ddPTM_A549_MK2206_60min_R1 1 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 ATS(0.001)T(0.5)S(0.5)PNSQSSK 209.19 2.1991999999999995e-31 25721000.0 3078.2 2737.2 2094.0 1307.1 2519.8 2434.8 2727.1 2816.7 2730.3 3561.1 3599.7 True False 3597.7249052355064 2876.511788473523 2390.96068724202 1627.339558677949 2149.140757958875 2692.4489199105665 3222.578769845831 3215.9758507819743 2111.8914093931776 2756.6450367086386 2705.795143334109 1.329636840430703 1.0630929675367276 0.8836443856927961 0.6014274815619354 0.7942732705590865 0.9950675410677627 1.1909914088599243 1.1885511209910795 0.7805067632691819 1.0187929575894914 1.0 11.401836901181406 -5.385008127760639 2.7255083692788786 0.9135989236594944 1.3565761243324936 0.30620060530661075 0.16768191852015915 0.32291993454355933 3.670475961186761 0.025158906853753972 0.2775081603737088 4.120898068219203e-06 5.385008127760639 0.4429772006729993 ATST(ph)SPNSQSSK ddPTM_A549_PD325901_60min_R1 2 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 AT(0.005)S(0.047)T(0.474)S(0.474)PNS(0.001)QSSK;AT(0.01)S(0.065)T(0.463)S(0.463)PNSQSSK 66.262 0.0057455 3933000.0 964.16 720.78 884.4 951.04 898.1299999999999 893.47 665.95 582.98 1149.35 1041.6799999999998 1270.26 True False 1062.0408134229226 781.52266017763 944.4207023292323 1009.7835808314483 835.0484471802953 886.1938765490341 691.293091671823 571.3520065610372 1101.0468164722897 975.9081470257786 1114.0260728415833 0.9533356887365659 0.701529954486769 0.8477545771619752 0.9064272420983467 0.7495771127243992 0.7954875546930333 0.6205358281323873 0.5128713056990405 0.9883492346492511 0.8760191263176609 1.0 10.121567282797011 -8.938402529272777 24.999892093066876 0.9948608532032172 0.7620335880149258 0.3174664264664371 0.12283853278835308 44.760938099317585 18166.472244763554 0.020550423682719244 0.02187733757128544 1.1523846658463097e-09 8.938402529272777 -0.23282726518829133 ATSTS(ph)PNSQSSK ddPTM_A549_MK2206_60min_R1 3 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 ATS(0.005)T(0.067)S(0.928)PNSQSSK;ATS(0.001)T(0.01)S(0.989)PNSQSSK;ATST(0.022)S(0.978)PNS(0.001)QSSK 250.81 9.981399999999997e-63 500464000.0 8354.9 6376.68 5055.2 3434.46 7303.0 7503.499999999999 6863.7 8088.0 7724.7 9247.7 8877.6 True False 9765.002862306583 6701.22577499757 5772.103374472713 4275.902854178766 6228.7383742256025 8297.515389579816 8110.745444828143 9234.49876846118 5975.0677838111105 7158.6381471934155 6673.046910704471 1.4633499498770488 1.004222788281002 0.8649876812964521 0.6407721856892147 0.9334174414739783 1.2434372934303035 1.2154485879332586 1.3838504197606933 0.8954032338999884 1.0727690428355885 1.0 12.704129930518535 ATSTS(ph)PNSQSSK ddPTM_A549_PD325901_60min_R1 3 ATSTSPNSQSSK 12 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 ATSTS(1)PNSQSSK;ATS(0.002)T(0.005)S(0.993)PNSQSSK;AT(0.004)S(0.025)T(0.127)S(0.807)PNS(0.033)QS(0.003)S(0.001)K 272.06 3.387099999999999e-77 712315100.0 28610.08 23978.42 19852.25 19779.15 23047.83 19430.05 15220.42 19145.72 22188.359999999997 24465.51 30975.28 True False 31514.554259972305 25999.165605672304 21199.54306627714 21000.863173791164 21429.029931497047 19271.818114812548 15799.641412033394 18763.843595073224 21255.860391300383 22920.75352328993 27165.516928478 1.1600940391800587 0.9570650053935476 0.7803843056655902 0.7730706258630279 0.7888320324592347 0.7094221017605458 0.5816065070151639 0.6907228617984743 0.7824574237723252 0.8437444273059932 1.0 14.729488879643762 -5.403753620881958 2.7313685667706658 0.8268850746134726 1.177723409380481 0.4888571680504463 0.10973303804546718 0.31636598559893436 3.6888926666288913 0.020359729263776407 0.21116629503003417 3.946811446952232e-06 5.403753620881958 0.3508383347670083 ATSVALPGWS(ph)PSETR ddPTM_A549_PD325901_60min_R1 2 ATSVALPGWSPSETR 15 0 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 ATSVALPGWS(0.986)PS(0.013)ETR;ATSVALPGWS(0.984)PS(0.016)ETR 173.71 2.3113000000000005e-27 19402100.0 5473.9 5489.6 5320.799999999999 6130.1 6325.9 6317.2 5548.1 6211.6 6212.6 7089.9 6941.7 True False 6029.6062983278025 5952.227857752873 5681.901484569632 6508.742354532785 5881.590607170267 6265.754817660987 5759.23598153681 6087.704765094071 5951.506026898463 6642.242504030096 6087.91490706188 0.9904222365745553 0.9777120653983499 0.9333082954196225 1.069125054126948 0.9661092010907905 1.029211957347304 0.946011248425334 0.9999654821115248 0.9775934975692276 1.091053768889773 1.0 12.571732478586037 ATT(ph)PADGEEPAPEAEALAAAR ddPTM_A549_PD325901_60min_R1 2 ATTPADGEEPAPEAEALAAAR 21 0 Q5JZ02;Q96S44 Q5JZ02 TP53RK TP53-regulating kinase 1 AT(0.011)T(0.989)PADGEEPAPEAEALAAAR;AT(0.075)T(0.925)PADGEEPAPEAEALAAAR 120.29 9.184899999999998e-15 32975000.0 720.78 792.8299999999999 901.0699999999999 958.3499999999999 1295.19 1219.58 857.6099999999999 1287.62 1205.4 1028.56 1005.52 True False 793.9530549898086 859.6445665371268 962.2220287740856 1017.5451029292329 1204.2203225629326 1209.6481448304596 890.2468178521995 1261.9374089816506 1154.7412298914146 963.6165460648517 881.8474145164524 0.9003292881741459 0.9748223472521035 1.0911434483274018 1.1538788753915985 1.365565405919173 1.3717204642412562 1.0095247808152306 1.431015602255425 1.3094569546644295 1.0927248072652525 1.0 9.784385238568658 -5.83766700859061 1.889575645246453 1.1916228633170467 0.9078652850334303 0.37052348362446985 0.13985778377981326 0.39215754370619615 2.5820869544625538 0.023446137698961183 0.1311935148061071 1.453225438133311e-06 5.83766700859061 -0.28375757828361636 ATT(ph)PLYHGFK ddPTM_A549_PD325901_60min_R1 2 ATTPLYHGFK 10 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AT(0.117)T(0.883)PLYHGFK;AT(0.127)T(0.867)PLY(0.006)HGFK 86.463 0.00067783 6957700.0 1765.0300000000002 1848.87 2238.7 1850.9499999999998 2165.4 2321.1000000000004 1739.04 1770.19 2356.59 2007.25 2313.05 True False 1944.2145462535893 2004.6807635098303 2390.631644396713 1965.27897768755 2013.3097742244572 2302.1977311582527 1805.220118839202 1734.8821717628089 2257.5507175624775 1880.5118924405726 2028.5595136320314 0.9584212507389409 0.9882287160116651 1.1784873100007847 0.9688051863801713 0.992482478672627 1.134892871363821 0.8899024685783304 0.8552286290366663 1.1128836508821223 0.927018349623676 1.0 10.986239913438617 ATT(ph)PPNQGRPDS(ph)PVYANLQELK ddPTM_A549_MK2206_60min_R1 2 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 2 AT(0.09)T(0.91)PPNQGRPDS(0.997)PVY(0.003)ANLQELK;AT(0.055)T(0.945)PPNQGRPDS(0.986)PVY(0.014)ANLQELK 133.75 3.5149999999999996e-22 201367000.0 7422.0 9466.7 8110.7 7148.9 11935.5 9545.5 8146.599999999999 9304.9 12897.0 12120.099999999999 12419.1 True False 8674.65214952178 9948.51459445503 9260.91921968187 8900.380820926319 10179.80376086125 10555.598474209914 9626.731768701562 10623.898070061125 9975.850092276974 9382.160992224977 9335.094720276857 0.929251647621687 1.0657111569361752 0.9920541244821148 0.9534322990417772 1.0904874632658619 1.1307435854166523 1.0312409308275403 1.1380600185003849 1.0686394076546784 1.0050418633509832 1.0 13.188448945761706 -6.7611566067210225 24.999999997526675 1.0520605737122692 0.9913652142721275 0.3254440662718937 0.053528012613373754 9.580521902409378 846864.2626656622 0.008219538649230428 0.016307907385405208 1.7331789002221245e-07 6.7611566067210225 -0.060695359440141705 ATT(ph)PPNQGRPDS(ph)PVYANLQELK ddPTM_A549_PD325901_60min_R1 2 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 2 AT(0.111)T(0.889)PPNQGRPDS(1)PVYANLQELK;AT(0.021)T(0.979)PPNQGRPDS(1)PVYANLQELK 207.12 7.926199999999998e-62 335850000.0 18192.6 19432.5 17937.4 16640.0 21432.6 19747.1 19098.5 19438.6 21174.5 20489.4 21369.5 True False 20039.499359315738 21070.144973364688 19154.739830348688 17667.815007818066 19927.24811445603 19586.286164730143 19825.30386860022 19050.881873713304 20284.609401307265 19195.69578725713 18741.186972421565 1.0692758889180656 1.1242695035469354 1.0220665243101028 0.9427265750999118 1.0632863406026418 1.045093151973361 1.057846757399837 1.016524828536606 1.082354571839922 1.024251869185468 1.0 14.193924708480193 ATT(ph)PPNQGRPDSPVYANLQELK ddPTM_A549_MK2206_60min_R1 1 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 AT(0.151)T(0.848)PPNQGRPDS(0.001)PVYANLQELK 75.32600000000001 7.5072e-05 18543000.0 2060.0 1928.2 1824.3 1485.6 2598.2 2002.9 1609.7 1558.8 2886.9 2747.5 2279.7 True False 2407.67763783547 2026.3371439919067 2083.013171793512 1849.5720666911177 2216.008221814727 2214.845548582583 1902.1616537057055 1779.764673624788 2233.0217594319897 2126.837841778378 1713.587573480781 1.4050508273381066 1.182511577086103 1.2155860628484385 1.079356605588656 1.293198116109927 1.2925196137385644 1.1100463630474848 1.038619035973506 1.3031267231333215 1.2411608689821254 1.0 10.742804207828197 -10.973326425679003 1.1453710724267254 0.9956352124680249 1.2145421314185723 0.0 0.12486154987345069 0.4529121952870459 1.0208017735493877 0.08133288446346779 0.01724847000596378 1.0633434844719237e-11 10.973326425679003 0.21890691895054737 ATT(ph)PPNQGRPDSPVYANLQELK ddPTM_A549_PD325901_60min_R1 2 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 AT(0.111)T(0.889)PPNQGRPDSPVYANLQELK;AT(0.122)T(0.878)PPNQGRPDSPVYANLQELK 117.82 2.0662e-15 64714000.0 4976.1 5347.200000000001 5756.6 5261.4 6196.700000000001 5660.7 4843.8 5631.6 6558.700000000001 5539.6 6665.9 True False 5481.270008788798 5797.827310000033 6147.277493247919 5586.3847284936255 5761.465169454465 5614.601135999101 5028.133459629064 5519.273320095267 6283.060647493633 5189.828710605949 5846.036558621632 0.9376044699387172 0.9917535157130517 1.0515290884012727 0.9555849800930382 0.9855335510958372 0.9604115676831999 0.8600927156730933 0.9441051667655994 1.074755620237695 0.8877516687698574 1.0 12.513243135834314 -8.75096316169382 24.988978643941785 1.0353012661314631 0.9621583485680236 0.0 0.06422657703239883 195.0965855869681 465365.06784149347 0.008921774710083558 0.010064055742793942 1.7743399799410822e-09 8.75096316169382 -0.07314291756343949 ATT(ph)PQLTDVSEDLDQQSLPSEPEETLSR ddPTM_A549_MK2206_60min_R1 1 ATTPQLTDVSEDLDQQSLPSEPEETLSR 28 0 Q8NC44;H7C3D5;C9JIF3 Q8NC44 FAM134A Protein FAM134A 1 AT(0.232)T(0.765)PQLT(0.003)DVSEDLDQQSLPSEPEETLSR 96.15799999999999 6.7927e-10 8148700.0 637.71 589.71 481.43 533.2 676.34 510.88 394.15 856.12 764.17 620.34 831.83 True False 745.3398574874072 619.7237201449374 549.7040132086556 663.8340239362577 576.8512819421805 564.9409825053018 465.76195303976124 977.4776317575395 591.0867151287351 480.2047631551592 625.2636536599189 1.192040914460059 0.9911398439961222 0.8791555530071476 1.0616865702181328 0.9225728675665676 0.9035244239745517 0.7449048898228288 1.5633047371872184 0.9453399564629538 0.7680036418946282 1.0 9.288320846143199 -5.261982326889787 8.487306413535586 0.9888689429375828 1.1932521070574855 0.07940035972741155 0.2065549614947319 0.1669422862206705 188.52196238844888 0.024591195350368137 0.19780024395437693 5.470382235270428e-06 5.261982326889787 0.20438316411990276 ATT(ph)PQLTDVSEDLDQQSLPSEPEETLSR ddPTM_A549_PD325901_60min_R1 1 ATTPQLTDVSEDLDQQSLPSEPEETLSR 28 0 Q8NC44;H7C3D5;C9JIF3 Q8NC44 FAM134A Protein FAM134A 1 AT(0.169)T(0.831)PQLTDVSEDLDQQSLPSEPEETLSR 148.89 8.773e-36 15903000.0 917.48 649.8 811.59 1165.2 1056.4 1278.7 958.36 966.34 1047.4 965.27 985.68 True False 1010.6218941869225 704.5609264732982 866.6693778871348 1237.1717576387987 982.202108382154 1268.2866911516337 994.8309142347149 947.0655906209352 1003.3814204316149 904.3226874659917 864.4476087403303 1.1690955981237507 0.815041790097588 1.002570160556106 1.431170316315179 1.13621935956699 1.467164323584371 1.1508284645316778 1.0955731510449724 1.1607197594007326 1.0461278142509611 1.0 9.755634719401762 -3.9425003502180154 13.454476089750159 1.1146251870322164 1.1373451021676038 0.0 0.17884826653847843 0.0 0.0 0.0237556108254199 0.0 0.00011415623840548265 3.9425003502180154 0.022719915135387403 ATT(ph)PSLPSVDNEFK ddPTM_A549_MK2206_60min_R1 2 ATTPSLPSVDNEFK 14 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 AT(0.003)T(0.994)PS(0.003)LPSVDNEFK;AT(0.009)T(0.986)PS(0.005)LPSVDNEFK 154.47 7.1789e-19 15061600.0 6510.3 7556.8 6613.2 6372.8 9880.599999999999 7876.200000000001 7753.6 8040.6 11544.5 10031.6 11413.0 True False 7609.079478446728 7941.408842297502 7551.051201943129 7934.1362860858635 8427.17682875167 8709.654256201573 9162.32875577596 9180.379673304771 8929.689182778277 7765.454592751221 8578.837117224266 0.8869593133047724 0.9256975897529329 0.8801951941461171 0.9248498575822128 0.9823215796732988 1.0152488195299405 1.0680152368647007 1.0701193585868125 1.0408973921243454 0.9051873216196207 1.0 13.066566384727729 -6.8687564927905544 1.999136452097474 1.027847061077657 0.8998473171858389 0.5906365228332773 0.0434972108107018 0.10181102986477937 0.825180105032865 0.004211304946770108 0.0092304028514601 1.3528308775395692e-07 6.8687564927905544 -0.12799974389181823 ATT(ph)PSLPSVDNEFK ddPTM_A549_PD325901_60min_R1 2 ATTPSLPSVDNEFK 14 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 ATT(1)PSLPSVDNEFK;ATT(1)PSLPSVDNEFK 230.06 2.8581999999999996e-47 22814500.0 12630.5 11083.0 12939.4 12530.4 15172.7 13720.0 13351.2 14166.1 12719.3 14277.0 15660.0 True False 13912.739061917337 12017.003305791886 13817.545494933142 13304.374349396852 14107.021894973412 13608.268868851503 13859.287222056972 13883.546022409531 12184.752053557224 13375.547783471933 13733.919276919052 1.01302030260938 0.8749871805339223 1.0060890279262549 0.9687237911581376 1.0271665072825489 0.9908510887872543 1.0091283444011943 1.0108946865402026 0.8872013740487519 0.9739061016581486 1.0 13.745455768654677 -8.713380023619779 24.999982132153136 0.9467336053787847 0.9859842768892095 0.08973865723500618 0.04646507957386758 207.17182979060874 107768.25646977659 0.00914776247404389 0.010372575779046836 1.9347282647516486e-09 8.713380023619779 0.03925067151042483 ATTPASTANSDVATIPTDT(ph)PLKEENEGFVK ddPTM_A549_PD325901_60min_R1 2 ATTPASTANSDVATIPTDTPLKEENEGFVK 30 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ATTPASTANSDVATIPT(0.011)DT(0.989)PLKEENEGFVK;ATTPASTANSDVATIPT(0.102)DT(0.898)PLKEENEGFVK 235.67 1.1545999999999997e-120 55668000.0 9200.1 9425.5 9473.1 10145.4 10894.6 10232.2 9723.2 7798.5 8042.1 7208.6 8474.0 True False 10134.08737924435 10219.81996379513 10116.001532377948 10772.058316124849 10129.400880329635 10148.872355675103 10093.221696739198 7642.952799695102 7704.118504156088 6753.447765772624 7431.751721111881 1.3636202822082661 1.3751562683079137 1.3611866908363928 1.4494642340545274 1.362989677326593 1.3656097157880709 1.3581214867642442 1.0284187478953646 1.036649069191921 0.908728926800346 1.0 12.859486589840165 -8.254537589505452 4.824717421308969 1.017727738831095 1.379528452599665 0.952449936831604 0.04107741437407856 0.01877434471654861 1.2770429857619559 0.004324966673537724 0.005455406000816671 5.564964657156991e-09 8.254537589505452 0.3618007137685699 ATTPLY(ph)HGFK ddPTM_A549_MK2206_60min_R1 1 ATTPLYHGFK 10 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AT(0.165)T(0.165)PLY(0.67)HGFK 43.512 0.027587 2214400.0 311.12 618.38 338.17 417.86 507.34 744.5 429.58 419.97 692.62 883.39 584.74 True False 363.62944984629667 649.8529006854658 386.12759102418045 520.2357187584479 432.71095806923387 823.2824958408971 507.6291254264132 479.5020336041844 535.7426758868636 683.8315854589996 439.5329199969957 0.8273087937276283 1.4785079140145125 0.8784952695393549 1.1836103624775223 0.9844790648950517 1.873084946280075 1.1549285669657758 1.090935426651232 1.2188908987534437 1.555814261793346 1.0 8.779827413704929 -4.314278617956883 16.40526981282039 1.1470313053219106 1.1494533567094471 0.0 0.30692323627826484 0.0 0.0 0.03426356064004655 0.0 4.849772672686034e-05 4.314278617956883 0.0024220513875365945 ATTPPNQGRPDS(ph)PVYANLQELK ddPTM_A549_MK2206_60min_R1 4 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 ATTPPNQGRPDS(1)PVYANLQELK;ATTPPNQGRPDS(1)PVYANLQELK;ATTPPNQGRPDS(1)PVYANLQELK;AT(0.002)T(0.013)PPNQGRPDS(0.906)PVY(0.079)ANLQELK 180.42 5.320499999999999e-42 105283000.0 8029.6 8423.1 7994.5 7091.0 11570.900000000001 8782.5 8043.1 8502.800000000001 13505.1 11343.6 12349.699999999999 True False 9384.800175128006 8851.799812031037 9128.240312395572 8828.29531832709 9868.835937878546 9711.858320648322 9504.42715842726 9708.097938732904 10446.21641321313 8781.072881527649 9282.928655619424 1.0109740711458461 0.9535568073845528 0.9833362563731208 0.9510247946355678 1.0631166417404752 1.0462062869317912 1.023860842954314 1.0458012012034699 1.125314736410207 0.9459377753821283 1.0 13.180364315270825 -6.768131341560663 24.99264390088771 1.0559324755337753 0.9738263441239945 0.2183092986615498 0.04643644614127061 117.97699391626928 440612.95997865224 0.006761864246471997 0.012992874419009627 1.705566504844554e-07 6.768131341560663 -0.08210613140978085 ATTPPNQGRPDS(ph)PVYANLQELK ddPTM_A549_PD325901_60min_R1 2 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 ATTPPNQGRPDS(1)PVYANLQELK;ATTPPNQGRPDS(1)PVYANLQELK 261.86 6.565599999999999e-124 185302000.0 20867.0 19156.8 18627.8 18943.8 22278.2 20543.9 21325.7 19611.1 22768.0 21698.9 24507.0 True False 22985.402478526506 20771.210766795448 19891.99452606115 20113.91550150865 20713.456087617662 20376.597289708327 22137.261183370807 19219.94122588968 21811.140137852773 20328.82775084257 21492.794362672754 1.0694469081435969 0.9664267203370026 0.9255192317202008 0.935844598059392 0.9637395555968937 0.9480664517545022 1.0299852503970968 0.8942504590873297 1.0148117443366462 0.9458438678475573 1.0 14.391565444962383 ATVASS(ph)TQK ddPTM_A549_MK2206_60min_R1 1 ATVASSTQK 9 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 ATVAS(0.118)S(0.856)T(0.027)QK 123.51 9.9336e-05 5139500.0 1939.5 2035.4 1659.4 1466.9 2036.0 1658.3 1484.2 1475.7 1883.8 2786.2 4147.8 True False 2266.84018377762 2138.9931661036876 1894.7278722107965 1826.290565851644 1736.5070970728914 1833.7802053095486 1753.859928204018 1684.8849941417122 1457.1223078104485 2156.7954849000607 3117.78678654366 0.7270670956594216 0.6860613994951685 0.6077156656088303 0.5857650605660072 0.5569678800896971 0.588167290086714 0.5625336330802547 0.540410589144088 0.4673579072499041 0.6917713213131734 1.0 11.60630655570172 -10.849517047884111 1.0616980159004263 1.0033142605256367 0.5831598350391293 0.3404706205139476 0.10983602104658002 0.1784316912123311 0.35245242614559247 0.05639995024383415 0.013340900898965795 1.4141092142493218e-11 10.849517047884111 -0.4201544254865074 ATVPVAAATAAEGEGS(ph)PPAVAAVAGPPAAAEVGGGVGGSSR ddPTM_A549_MK2206_60min_R1 2 ATVPVAAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR 41 0 O75179-4;O75179-6;O75179-2;O75179;A0A1W2PQ15;O75179-5;O75179-3;H0YLQ3 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 ATVPVAAATAAEGEGS(1)PPAVAAVAGPPAAAEVGGGVGGSSR;ATVPVAAAT(0.004)AAEGEGS(0.996)PPAVAAVAGPPAAAEVGGGVGGSSR 105.94 3.6972999999999996e-15 13936100.0 986.63 940.27 824.55 810.8399999999999 1215.79 860.1800000000001 871.19 962.1700000000001 1291.02 1305.8600000000001 1080.4299999999998 True False 1153.1490232124324 988.1257267821135 941.4835886654276 1009.4958363999905 1036.948901547274 951.2036766587274 1029.473946133984 1098.5605440220443 998.6060313353036 1010.8653190408417 812.1294126489624 1.4199079669472252 1.2167096910812467 1.1592777875074667 1.2430233663219612 1.2768271723653093 1.1712464317184863 1.2676230291624315 1.3526914884646466 1.2296144133951523 1.2447096525462027 1.0 9.665565828651378 -10.376067110994622 0.7273636533768872 0.9969023164167 1.256438020541191 0.04716402124342389 0.10041306957810735 0.348139031420293 0.33275138935282417 0.049790921354895566 0.014625086564132696 4.20661619036653e-11 10.376067110994622 0.2595357041244909 ATVT(ph)PS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 AT(0.003)VT(0.997)PS(1)PVK;AT(0.09)VT(0.915)PS(0.995)PVK 80.24 0.0025771 15268300.0 7028.4 8390.5 7278.6 7011.1 8935.7 7201.4 6632.799999999999 7130.1 10222.2 9457.099999999999 10411.099999999999 True False 8214.62209211787 8817.540611276892 8310.814927487949 8728.81981474024 7621.270367050216 7963.447368097563 7837.893903646151 8140.81351001546 7906.888021499085 7320.734541758798 7825.736538257552 1.049693156926403 1.126736195139042 1.0619850140442375 1.1153991412907653 0.9738725971405036 1.017597171737994 1.0015535106924651 1.0402616380218779 1.0103698205076046 0.935469077698954 1.0 12.93401082585564 -6.758625882615417 24.999999991881932 1.0066523808459082 1.0892972717675542 0.6347053591843281 0.032852917284337355 26.72261091673655 237445.7385071848 0.0031662904109947313 0.006368140764806561 1.7433079769359585e-07 6.758625882615417 0.08264489092164595 ATVT(ph)PS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 AT(0.005)VT(0.996)PS(0.999)PVK 60.167 0.012526 16976000.0 13474.0 14972.0 12610.0 14888.0 16039.0 15834.0 13540.0 15282.0 16527.0 18425.0 21038.0 True False 14841.870560965455 16233.742984238579 13465.790430090043 15807.597946898755 14912.475971546162 15705.053153745976 14055.272109372288 14977.188521502918 15832.427664190653 17261.64235556982 18450.459370869936 0.8044174002734147 0.8798557617415659 0.7298349683016664 0.8567590448103531 0.8082441565162527 0.8512011998216977 0.7617843993392986 0.8117515244714878 0.8581047954387141 0.9355670776860412 1.0 14.171369115825675 -10.089488239468851 0.6082341706386523 1.0029470901897852 0.8116666486619487 0.6248978364893414 0.04450379930955662 0.2916502351010064 0.20664076248354074 0.02692053557966732 0.009107913106567958 8.137888975775366e-11 10.089488239468851 -0.19128044152783652 ATVT(ph)PS(ph)PVKGK ddPTM_A549_MK2206_60min_R1 4 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 AT(0.015)VT(0.989)PS(0.996)PVKGK;AT(0.035)VT(0.991)PS(0.974)PVKGK;AT(0.019)VT(0.986)PS(0.995)PVKGK;AT(0.064)VT(0.98)PS(0.956)PVKGK 66.215 0.0028048 131347700.0 25205.8 27722.9 25978.899999999998 22750.899999999998 35514.3 27381.0 25770.300000000003 25688.6 36852.1 37488.4 38829.9 True False 29459.922817355986 29133.877195920155 29663.098661791642 28324.871521326717 30290.19351550875 30278.439245963204 30452.429933833722 29330.037718038067 28505.15819071103 29019.744403175453 29187.36417927856 1.0093382409046352 0.9981674609933987 1.0162993300659477 0.9704497928400069 1.0377844785660069 1.0373817608189249 1.0433429256161915 1.0048881953808215 0.9766266667871346 0.9942571115680906 1.0 14.833056310938355 -8.531516797211248 18.0171455904548 0.9890569323112645 1.01595018091266 0.24136474990546952 0.020041016647873434 6.992179458289743 14582.190862495361 0.0036284458670211785 0.00412503660466079 2.940919945562683e-09 8.531516797211248 0.026893248601395636 ATVT(ph)PS(ph)PVKGK ddPTM_A549_PD325901_60min_R1 4 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 AT(0.046)VT(0.954)PS(1)PVKGK;AT(0.114)VT(0.886)PS(1)PVKGK;AT(0.369)VT(0.632)PS(0.998)PVKGK;AT(0.007)VT(0.993)PS(1)PVKGK 126.12 3.9619999999999995e-06 396068000.0 45924.4 46674.4 47948.6 46075.5 53971.7 48904.0 49482.5 51108.9 52698.5 51302.9 59647.1 True False 50586.61128024359 50607.81549182107 51202.680334354896 48921.478989947216 50180.91398425699 48505.74203806952 51365.583615363 50089.49289534359 50483.76530897023 48063.626138592335 52310.884834119985 0.9670379585559652 0.9674433084491035 0.9788150304993072 0.9352064899127454 0.9592824541848753 0.9272590626574807 0.9819291678633505 0.9575348047386214 0.9650719055710179 0.9188073627697967 1.0 15.674823552834342 -10.326191617274675 0.5824279087950134 1.0025818626688696 0.9584023217845428 0.0 0.028554242359358932 0.6172443456805358 0.3604545799823286 0.01360865811707285 0.0034790551337578555 4.7185480587264226e-11 10.326191617274675 -0.04417954088432685 ATVT(ph)PSPVK ddPTM_A549_PD325901_60min_R1 2 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 AT(0.018)VT(0.868)PS(0.114)PVK;AT(0.004)VT(0.623)PS(0.373)PVK 161.51 7.583300000000001e-06 7980400000.0 35555.0 37434.0 34132.0 39242.0 40027.0 31618.0 35321.0 33634.0 41848.0 37225.0 38646.0 True False 39164.517425792415 40588.69455463443 36448.40277238962 41665.88921495173 37215.64160565365 31360.513490914494 36665.15998339282 32963.143484637425 40089.27409034007 34874.60714714174 33892.786997178395 1.1555413672252122 1.1975614327028778 1.075402939729447 1.2293438488378206 1.0980401702802394 0.9252857693150253 1.0817983185167164 0.9725710513975034 1.1828261303408758 1.0289684100055 1.0 15.04869065377736 -6.987757033358186 24.05015809762959 1.0661506223242898 1.1608686113015274 0.3639496256217616 0.07482371468761416 183.12346952913052 359724.82115567767 0.012659908612040026 0.023911450952865246 1.0285915841575837e-07 6.987757033358186 0.0947179889772376 ATVT(ph)PSPVKGK ddPTM_A549_MK2206_60min_R1 4 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.653)PS(0.347)PVKGK;AT(0.021)VT(0.634)PS(0.345)PVKGK;ATVT(0.746)PS(0.254)PVKGK;ATVT(0.592)PS(0.408)PVKGK 116.51 7.5552999999999995e-06 11638982000.0 36397.5 37177.9 41720.2 35107.0 48830.3 36755.2 35625.3 36284.799999999996 54456.200000000004 53088.0 54249.8 True False 42540.50816656145 39070.096310349945 47636.7517019458 43708.21657601313 41647.42755510729 40644.61086787283 42097.955868647536 41428.281517539595 42121.957648682146 41095.38392878274 40778.07744168865 1.0432200543881212 0.9581152119351124 1.1681951354882987 1.071855745002066 1.0213190559231682 0.9967270018061377 1.0323673529936832 1.015944941906119 1.0329559481786557 1.0077813008116392 1.0 15.315506137966112 -6.820033182227554 6.76258370703671 1.0159868867161748 1.0606833161297935 0.17867318052372538 0.04649198079308723 0.2843549509985559 25.76341691305009 0.006587955883417387 0.012589121100957907 1.5134456093543174e-07 6.820033182227554 0.04469642941361873 ATVT(ph)PSPVKGK ddPTM_A549_PD325901_60min_R1 3 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.679)PS(0.32)PVKGK;ATVT(0.688)PS(0.311)PVKGK;ATVT(0.777)PS(0.223)PVKGK 134.61 2.178e-08 9787060000.0 41653.4 39704.6 41587.0 40223.0 49530.0 48518.0 44959.0 45638.0 47056.0 45202.0 51742.0 True False 45882.02250438758 43050.64598530583 44409.34390294643 42707.48335693909 46051.18366922386 48122.885494091606 46669.9393475088 44727.71428768162 45078.39996164795 42347.93800577844 45378.06201956233 1.0111058177100645 0.9487105457863504 0.9786522810031356 0.9411482433632367 1.0148336358959391 1.0604878955241852 1.0284692045109716 0.9856682347606572 0.9933963231443159 0.9332249135611473 1.0 15.469707376076908 -6.780134590988725 24.990288660414272 1.0043103103234001 0.9690152405674957 0.17501126770621678 0.03363170939003462 239.1451892657899 319669.9302826196 0.003915956283049781 0.007409412484045521 1.6590726691859865e-07 6.780134590988725 -0.03529506975590446 ATVTPS(ph)PVK ddPTM_A549_MK2206_60min_R1 6 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.026)PS(0.974)PVK;AT(0.001)VT(0.247)PS(0.752)PVK;ATVT(0.095)PS(0.905)PVK;AT(0.021)VT(0.309)PS(0.67)PVK;ATVT(0.163)PS(0.837)PVK;ATVT(0.09)PS(0.91)PVK 183.57 4.9386e-11 4990987700.0 43037.9 46813.799999999996 41140.4 41240.9 53048.899999999994 42070.6 40940.799999999996 44401.3 63615.7 55614.90000000001 56365.5 True False 50301.64534436857 49196.42246209336 46974.72734355853 51344.922351374364 45245.477083452904 46522.48296779586 48379.213413701014 50695.32024827839 49206.845523397984 43051.45546377448 42368.390741339164 1.1872446525397262 1.1611586279601607 1.1087210659083384 1.2118685995141356 1.06790643429623 1.0980469674153452 1.141870450285879 1.196536364993787 1.1614046382787555 1.0161220360387406 1.0 15.370700712084616 -10.681672564415146 0.8636774585115246 0.9965017143958316 1.14706777054703 0.6225990282739011 0.041884747859597574 0.32979698678521174 0.42224387949223613 0.032239703998723675 0.007789375863612556 2.0812652621163077e-11 10.681672564415146 0.15056605615119845 ATVTPS(ph)PVK ddPTM_A549_PD325901_60min_R1 4 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.023)PS(0.977)PVK;ATVT(0.205)PS(0.795)PVK;AT(0.001)VT(0.116)PS(0.883)PVK;ATVT(0.039)PS(0.961)PVK 146.11 3.0715e-05 48767300.0 17137.199999999997 16716.699999999997 17151.4 16429.4 21030.6 17726.6 17404.6 17558.7 18791.9 18755.899999999998 19181.100000000002 True False 18876.955928260148 18125.474976263748 18315.39714374672 17444.20672412536 19553.483207631332 17582.24044683549 18066.941577162568 17208.477953966332 18002.141793592575 17571.64927309807 16821.946299010982 1.1221624176371308 1.0774897656955071 1.0887799079957556 1.03699098867953 1.1623793620587735 1.0451965625326725 1.0740101802741329 1.0229778200503514 1.0701580824004282 1.0445669579941037 1.0 14.038057014600714 -14.999999999995227 0.11937126277771909 0.7363049162384794 1.1190164146608526 0.3152299898286244 0.036228980476126015 52.46864121815832 0.4367079030705617 3.3371721265522236 0.12493536095309142 1.0000000000109905e-15 14.999999999995227 0.3827114984223732 ATVTPS(ph)PVKGK ddPTM_A549_MK2206_60min_R1 6 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.011)PS(0.989)PVKGK;ATVT(0.002)PS(0.998)PVKGK;AT(0.001)VT(0.101)PS(0.897)PVKGK;ATVT(0.005)PS(0.995)PVKGK;ATVT(0.029)PS(0.971)PVKGK;ATVT(0.048)PS(0.952)PVKGK 181.98 1.3069999999999999e-18 3086517000.0 36516.3 49952.8 40644.40000000001 52726.0 52346.8 38271.3 38424.0 38270.3 77866.4 60100.00000000001 55856.6 True False 42679.358702180296 52495.18415434031 46408.38708526245 65643.87236696016 44646.65506338666 42321.1435635671 45405.14343168792 43695.23222287833 60229.78472708966 46523.36825873721 41985.86465626467 1.0165173219985635 1.2503061347935718 1.1053336037069776 1.5634755388362713 1.0633734812634132 1.0079855186989082 1.081438808118319 1.0407129299493565 1.4345252913137954 1.10807217237565 1.0 15.357616078327323 -5.246582970147958 22.340020479375276 1.1878383273831632 1.0165167821251275 0.043400171292814815 0.174543089569848 1482.7445176862711 2229473.7508707587 0.027101505645661498 0.7284728472570215 5.667832795994296e-06 5.246582970147958 -0.17132154525803567 ATVTPS(ph)PVKGK ddPTM_A549_PD325901_60min_R1 9 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.001)PS(0.999)PVKGK;AT(0.001)VT(0.012)PS(0.988)PVKGK;ATVT(0.001)PS(0.999)PVKGK;AT(0.001)VT(0.003)PS(0.996)PVKGK;ATVT(0.008)PS(0.992)PVKGK;ATVT(0.017)PS(0.983)PVKGK;ATVT(0.001)PS(0.999)PVKGK;ATVT(0.114)PS(0.886)PVKGK;AT(0.001)VT(0.015)PS(0.984)PVKGK 172.09 3.1984e-15 13823915300.0 32243.399999999998 52667.81 32076.1 72222.1 45032.7 41973.2 38901.00000000001 42260.4 78077.6 49054.3 39863.700000000004 True False 35516.72623166348 57106.311186395265 34252.97703525861 76683.09508871008 41869.758506381164 41631.384175370105 40381.39884244399 41417.48316935756 74796.26999416779 45957.00312634082 34960.71761681471 1.0159038101260642 1.633442191098772 0.9797561197309147 2.193407353052403 1.19762297116703 1.1908046233967196 1.155050628109022 1.1846862991575837 2.1394374913572642 1.314532602850158 1.0 15.093447177991916 ATVTPSPVKGK ddPTM_A549_MK2206_60min_R1 1 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 0 67.726 0.015178 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ATVTPSPVKGK ddPTM_A549_PD325901_60min_R1 1 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 0 100.72 1.1040000000000001e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ATVVESSEK ddPTM_A549_PD325901_60min_R1 2 ATVVESSEK 9 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ; 136.57 0.00012306 13670800.0 9321.6 10478.7 10007.1 10445.0 11810.2 10359.099999999999 10726.3 10698.5 11555.7 11949.5 14504.1 False True 10267.92196980077 11361.776824000843 10686.241983580814 11090.163927683883 10980.692294978153 10274.738924148662 11134.495216156582 10485.11002468911 11070.054115029225 11195.006530685578 12720.187649065238 0.8072146616921428 0.8932082715647501 0.8401009700801159 0.8718553714495604 0.8632492379768537 0.8077505778701084 0.8753404842242887 0.8242889424244951 0.8702744346576305 0.8800975928612389 1.0 13.634832333063148 -10.35117249150267 0.6309807808554463 1.0069897650511306 0.8485650314769402 0.25832461642670623 0.043679606959602095 0.25422468744694454 0.1766823671249421 0.02089909807300662 0.0055535234737383275 4.4547927941601795e-11 10.35117249150267 -0.1584247335741904 AVAAPRPDR ddPTM_A549_MK2206_60min_R1 1 AVAAPRPDR 9 1 O75534;O75534-4;E9PLT0;O75534-2;O75534-3 O75534 CSDE1 Cold shock domain-containing protein E1 0 49.418 0.030595999999999998 690120.0 323.8 267.14 343.93 257.24 379.53 262.0 225.52 252.13 412.78 419.32 477.82 False True 378.44952385006076 280.73628495280485 392.7044456366511 320.2638115479423 323.70163976035093 289.72466609847544 266.4940648218367 287.87019961574157 319.2859890742103 324.5953207696121 359.16410683887636 1.0536952792441368 0.7816379187320776 1.0933844394780272 0.8916921414188388 0.9012638891156399 0.8066637522564247 0.7419841229886255 0.8015004677092699 0.8889696464503463 0.9037521138358848 1.0 8.48849937094249 -4.727354437052433 6.7936353932598035 0.9109492629435055 11.214625898346128 0.1412906841031778 0.10015797321804834 9275.050974865551 3235.0148428281227 0.014832035108265737 1453601.7958305276 1.8734649090411994e-05 4.727354437052433 10.303676635402622 AVAAPRPDR ddPTM_A549_PD325901_60min_R1 1 AVAAPRPDR 9 1 O75534;O75534-4;E9PLT0;O75534-2;O75534-3 O75534 CSDE1 Cold shock domain-containing protein E1 0 51.854 0.025442 1701500.0 561.08 455.12 513.24 431.2 469.06 486.88 404.17 656.86 329.53 593.47 625.76 False True 618.0404285547346 493.4745596437791 548.0715527628396 457.8342446737473 436.11484376915286 482.9150107045492 419.55091052031054 643.7584120032982 315.6810000714434 555.9982029177763 548.7954870194679 1.1261762226058727 0.8991957319544678 0.9986808669645589 0.8342529330193018 0.7946764397384378 0.8799544131226034 0.7644940974258183 1.1730388227125883 0.57522521146433 1.0131245902502344 1.0 9.100124807434495 -2.0000189014230196 0.5659752799484504 0.8245308855978675 15.297489483490498 0.0764674901236908 0.1575385475157756 167.61524711317378 1.3230092507509212 0.030914441281225225 2979.3698747114713 0.00999956478812193 2.0000189014230196 14.47295859789263 AVADAIR ddPTM_A549_PD325901_60min_R1 2 AVADAIR 7 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 ; 86.866 0.035962 9633100.0 3851.3 4021.0 3681.7 3463.8 4554.3 4915.700000000001 4022.1000000000004 4437.200000000001 4155.1 4333.7 4888.8 False True 4242.281140822788 4359.8637817007275 3931.5623018606266 3677.7510591394357 4234.421679482058 4875.66816899514 4175.163216477574 4348.696565083938 3980.4755967494766 4060.069442406131 4287.508592656567 0.989451344328209 1.0168758120200825 0.9169806233378546 0.8577827844913258 0.9876182374851833 1.1371798011894236 0.9737970493233733 1.0142712186121727 0.9283889491363443 0.9469530741839253 1.0 12.065923847275956 AVAEEDNGS(ph)IGEETDSSPGR ddPTM_A549_MK2206_60min_R1 1 AVAEEDNGSIGEETDSSPGR 20 0 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AVAEEDNGS(0.999)IGEETDSSPGR 84.874 6.5132e-05 2376500.0 0.0 177.54 0.0 294.71 354.6 0.0 0.0 0.0 195.75 184.11 387.91 True False 0.0 186.57602766534768 0.0 366.9139632300347 302.4388097357795 0.0 0.0 0.0 151.4129375485165 142.51942313005176 291.58124122863967 0.0 0.6398766494002489 0.0 1.2583592884232353 1.0372368553662408 0.0 0.0 0.0 0.5192821627019141 0.48878117991924247 1.0 8.187754097172956 -10.051429985128522 0.991968084430177 0.9450812734219577 0.39917958808943405 0.053595252245543956 0.45019125290918993 0.5845607378354964 1.1577255869214564 0.16827423288228355 0.08533038881464429 8.883211756514063e-11 10.051429985128522 -0.5459016853325236 AVAEEDNGS(ph)IGEETDSSPGR ddPTM_A549_PD325901_60min_R1 3 AVAEEDNGSIGEETDSSPGR 20 0 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AVAEEDNGS(0.998)IGEET(0.002)DSSPGR;AVAEEDNGS(1)IGEETDSSPGR;AVAEEDNGS(0.274)IGEET(0.274)DS(0.226)S(0.226)PGR 116.82 3.4558e-14 10569000.0 599.77 453.02 329.31 768.57 718.6 384.47 505.41999999999996 879.9100000000001 563.31 556.6800000000001 768.54 True False 660.6582088726622 491.1975852738281 351.6589569018991 816.0428233508857 668.1280150354182 381.33900379062226 524.6540346764363 862.359504773959 539.6360396632925 521.5311297963967 674.0144521764608 0.9801840401779665 0.7287641736578517 0.5217380069023101 1.2107200679685737 0.9912666010023454 0.5657727405684553 0.7784017582742853 1.2794377064012692 0.8006297756980628 0.7737684675934172 1.0 9.396635715691911 -14.999999999999998 0.23905452726264684 1.7799745239269102 0.841517557262842 0.0 0.23399787171592562 124.01360663352138 1.5734081457752283 46.273816998545186 0.12795585302496418 1.000000000000004e-15 14.999999999999998 -0.9384569666640682 AVAEEDNGSIGEETDS(ph)SPGR ddPTM_A549_MK2206_60min_R1 3 AVAEEDNGSIGEETDSSPGR 20 0 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AVAEEDNGS(0.021)IGEET(0.172)DS(0.403)S(0.403)PGR;AVAEEDNGS(0.046)IGEET(0.046)DS(0.454)S(0.454)PGR;AVAEEDNGSIGEET(0.236)DS(0.622)S(0.142)PGR 234.49 9.224699999999999e-77 13258800.0 1174.6 2701.86 2348.19 2278.06 4074.48 3136.4 2473.09 2737.71 5037.0 2988.19 2757.68 True False 1372.8437637871561 2839.3731334228673 2681.1986514684027 2836.1848022659983 3475.12938943102 3468.2917662261752 2922.418440804526 3125.7887763852455 3896.1275424361547 2313.1558036119136 2072.8719479038805 0.6622906760716196 1.369777393289578 1.2934704694034147 1.36823927070555 1.6764804950663372 1.6731818720077545 1.409840315394166 1.5079507345092351 1.8795794628684024 1.1159183305804354 1.0 11.017415281075595 -5.036155102329073 1.6692342032243037 1.4575654608021589 2.804051529019637e-14 0.4550956499306239 0.2410677278263638 1.7051386478472121 2.8532857622376446 0.04519481026219901 4.751714325907371 9.201209044818282e-06 5.036155102329073 -1.457565460802131 AVAEEDNGSIGEETDS(ph)SPGR ddPTM_A549_PD325901_60min_R1 3 AVAEEDNGSIGEETDSSPGR 20 0 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AVAEEDNGS(0.001)IGEET(0.063)DS(0.468)S(0.468)PGR;AVAEEDNGSIGEET(0.014)DS(0.6)S(0.385)PGR;AVAEEDNGSIGEET(0.002)DS(0.606)S(0.392)PGR 146.58 5.040399999999999e-21 22996900.0 2744.69 3179.7 3798.6000000000004 3596.8 4562.200000000001 4461.75 4021.4799999999996 3933.0 3458.8999999999996 4422.04 2902.4799999999996 True False 3023.3289082660126 3447.6644781581213 4056.395838837432 3818.966167074519 4241.766810735577 4425.414987288499 4174.519622038295 3854.553229621189 3313.5344616487596 4142.8316397299295 2545.4933603366558 1.1877182456552 1.354418963285824 1.5935597798223882 1.5002852596596203 1.6663829797515477 1.738529377544011 1.6399648441770798 1.514265678191124 1.301725831730524 1.6275161838104408 1.0 11.313729587143854 -9.397900346245791 0.9480003565848865 1.061238966846395 1.5357890772825376 0.0 0.227545293547713 0.2377032986602649 0.4519034760170044 0.0469607106927464 0.03519820059619837 4.000365321127134e-10 9.397900346245791 0.4745501104361425 AVAEEDNGSIGEETDS(ph)SPGRK ddPTM_A549_MK2206_60min_R1 2 AVAEEDNGSIGEETDSSPGRK 21 1 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AVAEEDNGSIGEET(0.014)DS(0.584)S(0.403)PGRK;AVAEEDNGSIGEET(0.003)DS(0.63)S(0.367)PGRK 222.57 5.601299999999999e-76 120808000.0 3601.7 3599.5 2942.1 3403.5 5059.0 3661.4 2957.5 3650.5 5412.3 5100.1 5607.1 True False 4209.5789068893255 3782.6991752924323 3359.334020026142 4237.357652788924 4314.827801616774 4048.8469177593793 3494.8394674999226 4167.96955418738 4186.422691667105 3947.9838678267183 4214.70232191257 0.9987843945712114 0.8975009114228258 0.7970513131047711 1.0053753098430147 1.0237562399564124 0.960648370516965 0.8292019698117175 0.9889119647947084 0.9932902425638847 0.9367171311959183 1.0 12.041215024046249 -8.487320189525452 24.98670853665822 0.9965299238269785 0.9299786253266641 0.08896170553067695 0.06917322251927482 783.5242545175058 550577.3219786044 0.011070025096718332 0.013380179718515165 3.25596561987373e-09 8.487320189525452 -0.06655129850031438 AVAEEDNGSIGEETDSS(ph)PGRK ddPTM_A549_PD325901_60min_R1 2 AVAEEDNGSIGEETDSSPGRK 21 1 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 AVAEEDNGSIGEETDS(0.112)S(0.888)PGRK;AVAEEDNGSIGEETDS(0.023)S(0.977)PGRK 311.58 3.8588999999999985e-164 153595000.0 29530.0 30035.0 29543.0 30286.0 35687.0 33938.0 29925.0 33014.0 33186.0 31640.0 34947.0 True False 32527.863861162976 32566.15485784167 31547.965636490888 32156.697435503484 33180.46823346644 33661.620180108046 31063.812250588322 32355.50987101804 31791.307827423687 29642.2450002838 30648.74054728544 1.0613115997696019 1.0625609495306343 1.0293397077057083 1.0492012676961893 1.0826046239086073 1.0983035380580901 1.0135428632919679 1.0556880737431726 1.0372794202872864 0.9671602966703052 1.0 14.903540169827064 -9.691704136704818 0.5123265000120488 0.9994811779276376 1.0596486246490555 0.5521053847946182 0.024053067827193023 0.5598809849631748 0.3154628599811462 0.014263255557407458 0.006292186657321989 2.0337420267071056e-10 9.691704136704818 0.06016744672141794 AVAGVMITAS(ph)HNR ddPTM_A549_MK2206_60min_R1 14 AVAGVMITASHNR 13 0 Q6PCE3 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase 1 AVAGVMIT(0.093)AS(0.907)HNR;AVAGVMIT(0.001)AS(0.999)HNR;AVAGVMIT(0.009)AS(0.991)HNR;AVAGVMIT(0.328)AS(0.672)HNR;AVAGVMIT(0.022)AS(0.978)HNR;AVAGVMIT(0.003)AS(0.997)HNR;AVAGVMIT(0.244)AS(0.756)HNR;AVAGVMIT(0.043)AS(0.957)HNR;AVAGVMIT(0.081)AS(0.919)HNR;AVAGVMIT(0.245)AS(0.755)HNR;AVAGVMITAS(1)HNR;AVAGVMIT(0.003)AS(0.997)HNR;AVAGVMIT(0.009)AS(0.991)HNR;AVAGVMIT(0.067)AS(0.933)HNR 174.24 2.2661e-22 965403400.0 17634.95 19327.96 18028.27 17021.730000000003 24746.79 20303.21 20126.49 19051.399999999998 29034.569999999996 25764.99 27262.479999999992 True False 20611.298426867288 20311.67060760805 20584.94977506431 21192.05461413451 21106.569972874484 22451.682206019967 23783.212711493674 21751.99429246554 22458.286253680864 19944.660864437315 20492.45380982948 1.0057994332031044 0.9911780597921995 1.0045136598131779 1.0341394354623095 1.0299679173974976 1.095607310592093 1.1605839365164623 1.0614636243333586 1.095929577887273 0.9732685528792355 1.0 14.322805125602578 -6.565774842950348 1.8247026652739193 1.059864255500142 0.9990385363935166 0.23779103457985717 0.047241367509374736 0.4396706009147516 2.908341433262766 0.007566591939371949 0.020454598037534674 2.717847953615828e-07 6.565774842950348 -0.06082571910662549 AVAGVMITAS(ph)HNR ddPTM_A549_PD325901_60min_R1 10 AVAGVMITASHNR 13 0 Q6PCE3 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase 1 AVAGVMIT(0.017)AS(0.983)HNR;AVAGVMIT(0.004)AS(0.996)HNR;AVAGVMIT(0.021)AS(0.979)HNR;AVAGVMIT(0.002)AS(0.998)HNR;AVAGVMIT(0.002)AS(0.998)HNR;AVAGVMIT(0.004)AS(0.996)HNR;AVAGVMIT(0.016)AS(0.984)HNR;AVAGVMIT(0.123)AS(0.877)HNR;AVAGVMITAS(1)HNR;AVAGVMIT(0.001)AS(0.999)HNR 141.75 8.016100000000001e-13 1190833400.0 18596.82 20478.3 21468.1 21418.2 23497.399999999998 22539.800000000003 20284.82 22186.2 22795.300000000003 24851.3 25766.300000000003 True False 20484.755476144695 22204.078209600088 22925.054364172534 22741.153569738522 21847.02368562935 22356.24334184687 21056.76992537941 21743.67883626281 21837.292813791082 23282.184676850615 22597.208446033168 0.9065170826328637 0.9826027078799597 1.0145082486149708 1.006370040089205 0.966801883418679 0.9893365100931927 0.9318305832186021 0.9622285375731802 0.9663712606777548 1.0303124269731507 1.0 14.463856939366249 -10.726353720987525 1.0391299505196887 0.9996016891337176 0.9714851529868751 0.21007793212841164 0.03085644235719941 0.947082374082391 1.8557430167048423 0.0188151419853477 0.005147775552525237 1.8777867877801525e-11 10.726353720987525 -0.028116536146842508 AVAGVMITAS(ph)HNRK ddPTM_A549_MK2206_60min_R1 2 AVAGVMITASHNRK 14 1 Q6PCE3 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase 1 AVAGVMIT(0.048)AS(0.952)HNRK;AVAGVMIT(0.038)AS(0.962)HNRK 112.5 1.5324000000000001e-06 10454100.0 2913.7 3112.1 3822.6 3199.8999999999996 4533.4 2924.2 2901.3 2642.1 4425.6 4838.3 5008.4 True False 3405.4613268743733 3270.492597146156 4364.702160005418 3983.8756436489707 3866.542865358666 3233.6369030731385 3428.4286549645067 3016.6257660918986 3423.20866623098 3745.324669654713 3764.6760551919724 0.9045828318157161 0.8687314789371389 1.1593831968585802 1.0582253519940166 1.0270585858313641 0.8589416076354133 0.9106835766748809 0.801297567670287 0.9092970061819622 0.9948597474912692 1.0 11.87831001312502 -7.228450838769092 24.82156698729668 0.933168644892243 1.0077935821008348 0.18479198701636756 0.08950974499608914 1019.6915342374186 767246.6856836692 0.014201160474712139 0.024596133024368503 5.909478558553895e-08 7.228450838769092 0.07462493720859176 AVAGVMITAS(ph)HNRK ddPTM_A549_PD325901_60min_R1 4 AVAGVMITASHNRK 14 1 Q6PCE3 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase 1 AVAGVMIT(0.026)AS(0.974)HNRK;AVAGVMIT(0.102)AS(0.898)HNRK;AVAGVMIT(0.268)AS(0.732)HNRK;AVAGVMIT(0.147)AS(0.853)HNRK 111.74 1.8735e-06 23084900.0 5700.89 5933.9 5890.2 6506.4 7274.6 7579.4 5846.800000000001 7431.9 8078.200000000001 7374.1 7398.4 True False 6279.640156026596 6433.970578023863 6289.944392649984 6908.285550893481 6763.657192007592 7517.67587934206 6069.303173491723 7283.664924287233 7738.701346697223 6908.498067528219 6488.443702321707 0.9678191634427842 0.9916045932126447 0.9694072540691545 1.0647060940702229 1.0424159478470019 1.158625430725718 0.9354019934425868 1.1225596242256026 1.1926899117469643 1.0647388471685755 1.0 12.663656764089591 -6.413988391608796 1.6877919161085475 1.0866878285919905 0.9734388067308386 0.26963452219341344 0.06820468985280066 0.43374362844810216 2.3770772094523185 0.01240196040069451 0.03910954794562058 3.8548866137343433e-07 6.413988391608796 -0.11324902186115193 AVANSRPAK ddPTM_A549_PD325901_60min_R1 1 AVANSRPAK 9 1 P18206;P18206-2 P18206 VCL Vinculin 0 50.04 0.02928 1402300.0 804.74 836.74 830.65 734.65 797.35 951.03 768.62 872.96 779.39 1062.0 1222.7 False True 886.4366123817239 907.2550163392852 887.0229041042253 780.0276619887949 741.3468867081704 943.2851269929914 797.8702547050025 855.5481279761282 746.6349487017335 994.9451387579456 1072.315651333904 0.826656415281306 0.8460708516290962 0.8272031682096738 0.7274235538933724 0.6913513626197416 0.8796711358447437 0.7440628640573268 0.7978510123505812 0.6962828042031831 0.9278472598253009 1.0 10.066513930739903 -10.914676396604365 1.136904193328644 1.0015150857533042 0.7759607364260422 0.5534618005553111 0.062025420893918895 0.2531534624063727 0.574810645754744 0.04539949060103198 0.010464612333151645 1.217092548158825e-11 10.914676396604365 -0.22555434932726193 AVAQALEVIPR ddPTM_A549_MK2206_60min_R1 1 AVAQALEVIPR 11 0 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 85.355 0.0012102 778730.0 492.05 840.37 602.9 917.77 1243.3 506.87 545.65 697.94 1247.4 868.18 1220.3 False True 575.0960105324967 883.1412434895133 688.400285739357 1142.6236912002605 1060.4122169895509 560.5066469669243 644.787541991998 796.8751323516063 964.865891688478 672.0575350228037 917.2658314333443 0.6269676584745736 0.9627974936224246 0.7504915828638729 1.245684350211504 1.1560576886773621 0.6110623853622255 0.7029451222274742 0.8687504810970532 1.0518934191419216 0.7326747732144655 1.0 9.841196089475606 -8.756072958335267 24.498988167620954 1.0245052288610388 0.8734436114310311 0.0 0.21035401132195494 173.2701695014535 791018.1837324165 0.033251401046587435 0.03715499735606597 1.7535858873361437e-09 8.756072958335267 -0.15106161743000768 AVAS(ph)PEATVSQTDENK ddPTM_A549_MK2206_60min_R1 2 AVASPEATVSQTDENK 16 0 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AVAS(1)PEATVSQTDENK;AVAS(0.975)PEAT(0.025)VSQTDENK 262.19 3.608099999999999e-91 48422000.0 5875.4 6196.5 5579.3 5147.4 7984.2 5444.3 5842.0 6778.0 7697.6 8375.4 8193.7 True False 6867.023880261421 6511.8753826085795 6370.528635305352 6408.5132310755625 6809.734756605785 6020.412212366147 6903.415779927154 7738.802256754434 5954.1058905413065 6483.391323032074 6158.978155384251 1.1149615580724521 1.0572980157294147 1.0343483082069647 1.0405156617535922 1.1056598326546483 0.9775017966418719 1.120870314159518 1.2565075019772691 0.9667359974862318 1.052673212903705 1.0 12.588475295899299 AVAS(ph)PEATVSQTDENK ddPTM_A549_PD325901_60min_R1 2 AVASPEATVSQTDENK 16 0 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AVAS(0.996)PEAT(0.004)VSQTDENK;AVAS(0.996)PEAT(0.004)VSQTDENK 268.47 1.8374e-91 70666000.0 11821.0 11155.900000000001 11429.400000000001 12503.7 15307.8 12440.099999999999 12107.2 13320.5 13327.0 13529.7 14728.2 True False 13021.059217839736 12096.046844634462 12205.067814565507 13276.025151036949 14232.632937043116 12338.791950102004 12567.94612131405 13054.812177769896 12766.912535890893 12675.432433006948 12916.724769752194 1.0080774693234826 0.9364639303115323 0.9449042255004757 1.0278166785845084 1.101876303068132 0.9552570152300862 0.972997903520024 1.0106905899505632 0.9884016856802489 0.9813193869927234 1.0 13.656952678880574 -6.251046348185379 24.73623839746629 1.0006779934755106 0.9604800805028303 0.17153980757125276 0.03990662876764639 849.3664477572515 2021553.1069864472 0.005439689504222979 0.014216481382690448 5.609881038278389e-07 6.251046348185379 -0.04019791297268027 AVDFAER ddPTM_A549_MK2206_60min_R1 2 AVDFAER 7 0 P62917;E9PKZ0;G3V1A1;E9PKU4;E9PP36 P62917 RPL8 60S ribosomal protein L8 0 ; 112.17 0.02189 9540000.0 4781.4 5290.4 5276.6 4856.8 6507.4 5665.4 5057.200000000001 5611.4 8700.7 7684.299999999999 8770.1 False True 5588.383425993452 5559.658762874589 6024.90122363956 6046.716218030039 5550.170080300655 6264.908867611842 5976.027778542894 6406.833134191776 6730.005342162846 5948.411293021868 6592.2421275535335 0.8477212028720452 0.8433638594124047 0.913938096790671 0.9172472887117776 0.8419244883470922 0.9503456860946384 0.9065243149314778 0.9718746687736475 1.020897778319383 0.9023350747630079 1.0 12.686553517141595 -8.076728702038718 1.052643506732497 1.0109734190961615 0.8765799799191446 0.4153336577981882 0.0448955214984948 0.1560843636366463 0.3429624524196241 0.0058534096266944224 0.008430181373039015 8.38052638931198e-09 8.076728702038718 -0.13439343917701685 AVDFAER ddPTM_A549_PD325901_60min_R1 2 AVDFAER 7 0 P62917;E9PKZ0;G3V1A1;E9PKU4;E9PP36 P62917 RPL8 60S ribosomal protein L8 0 ; 125.25 0.016696000000000003 16852700.0 5255.5 5145.700000000001 5249.8 4845.1 5866.8 5610.8 5320.3 5363.4 5369.5 6253.1 6529.6 False True 5789.034491105384 5579.346197835724 5606.0829976119485 5144.37082297953 5454.736207361248 5565.1075050548125 5522.766927879869 5256.422779494094 5143.838587939234 5858.278198839277 5726.500594544746 1.010920089071537 0.9743029107777957 0.9789718703517624 0.8983445889938837 0.9525426772080684 0.9718164545999207 0.96442265860254 0.9179118543184187 0.8982516465360058 1.0230118904414447 1.0 12.483438076847014 -5.586650274467486 1.7895945564922735 0.9482381075401516 1.0104324662343 0.13925837667028296 0.03778308008582564 0.6790187894392946 3.3531576520354482 0.0057757606517706405 0.05734220058101693 2.5902979720157093e-06 5.586650274467486 0.062194358694148466 AVDHEET(ph)PVR ddPTM_A549_MK2206_60min_R1 2 AVDHEETPVR 10 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 1 AVDHEET(1)PVR;AVDHEET(1)PVR 119.39 5.2523999999999994e-05 51325000.0 1752.6399999999999 1615.85 1443.99 1068.82 1858.0900000000001 1354.92 1263.08 1748.3600000000001 2149.71 2181.66 2300.4 True False 2048.442784065999 1698.0898631466264 1648.7694951149008 1330.6809479811536 1584.7674223969398 1498.2967350768952 1492.5652864276585 1996.19538412794 1662.804117381463 1688.8214907713254 1729.1471921898433 1.184654952058645 0.9820389327273609 0.9535159890158629 0.7695590947905018 0.9165023252820619 0.8664946176036106 0.8631800075605071 1.1544392479392682 0.9616324884844757 0.9766788497817539 1.0 10.75584496706269 AVDHEET(ph)PVR ddPTM_A549_PD325901_60min_R1 2 AVDHEETPVR 10 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 1 AVDHEET(1)PVR;AVDHEET(1)PVR 160.56 8.3078e-09 77957000.0 2972.7 2819.1 2991.3999999999996 2593.7 3388.9 2779.7 2797.0 2699.8 2946.1 3161.3 3137.8 True False 3274.4863156139254 3056.675450632311 3194.414392749509 2753.9069582799116 3150.875355070318 2757.063044806599 2903.4413655771286 2645.9503710478716 2822.2856623387247 2961.694978489166 2751.8704921530402 1.1899129428332926 1.1107628281739355 1.1608156713255158 1.0007400297843516 1.1449940555178888 1.001886917523323 1.0550792175199715 0.9615097725684403 1.0255881119356718 1.0762479509607883 1.0 11.4261968605433 -5.399076637534766 0.40538240879611953 1.0054506712107534 1.2944465967527523 0.5143269365297133 0.05064334988288371 2.1496519858996965 0.2525403217722108 0.010047854056365955 0.29346374156742955 3.989544948665515e-06 5.399076637534766 0.28899592554199893 AVDIPHMDIEALK ddPTM_A549_MK2206_60min_R1 1 AVDIPHMDIEALK 13 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 80.52199999999999 0.00072919 1055300.0 870.87 747.87 996.03 793.07 1257.6 867.62 910.27 1078.7 1341.5 1042.3 1083.9 False True 1017.8515652727064 785.9333885889573 1137.2820311908636 987.3721856022653 1072.6087059326467 959.4309725204548 1075.6542762742702 1231.6090283802027 1037.6523919352996 806.8437060912119 814.7377158818342 1.2492996769776776 0.9646458894299493 1.39588730093331 1.2118896257718714 1.3165079816781342 1.1775948919733161 1.320246080801638 1.5116632069096818 1.2736029911321742 0.9903109802863633 1.0 9.670191884826982 -10.514112867045247 0.9754879955459627 1.0097922646867779 1.266314633951152 0.390188142090534 0.13052577661203035 0.4421414450622377 0.7922654398852406 0.07177347495385619 0.02376576459286781 3.0611677757302666e-11 10.514112867045247 0.2565223692643741 AVDIPHMDIEALK ddPTM_A549_PD325901_60min_R1 2 AVDIPHMDIEALK 13 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ; 101.6 0.00015178 2641900.0 1305.3 1113.73 1605.56 1656.0900000000001 1780.31 1611.33 1590.03 1572.83 1678.4299999999998 1550.56 1762.3400000000001 False True 1437.8130950889274 1207.5879357357753 1714.5229566166017 1758.3829180467199 1655.267167336079 1598.2078627147587 1650.5394617478005 1541.4586717887344 1607.8914239975506 1452.6573769797742 1545.5833523937115 0.9302721156139035 0.7813153097602481 1.109304751478622 1.1376823613708291 1.070965965551127 1.0340483159575609 1.0679071168769636 0.9973313114439354 1.0403136275422091 0.9398764387116237 1.0 10.593935744644334 -5.7620611353355935 24.99999899630115 1.0380883320091778 0.8557937005196068 0.5857077247328422 0.06092743517255584 7.3591000198318754 295968.6905072053 0.007660381703309439 0.026106710472157166 1.7295728712938648e-06 5.7620611353355935 -0.18229463148957104 AVDIPHMDIEALKK ddPTM_A549_MK2206_60min_R1 2 AVDIPHMDIEALKK 14 1 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ; 93.958 1.748e-05 3167600.0 1055.3000000000002 1078.6999999999998 915.1700000000001 1090.9 1351.77 1367.0 969.47 1112.16 1528.88 1332.92 1389.6 False True 1233.4088403921223 1133.601222499777 1044.9548673081565 1358.1705489723624 1152.926423678891 1511.6550326588404 1145.6101499770582 1269.8120858471548 1182.5911211196722 1031.8124462468554 1044.523968991048 1.1808334485454908 1.0852802388008125 1.0004125308081966 1.3002770537513655 1.1037816822839919 1.4472190945689978 1.0967772726973934 1.215684966113054 1.1321818897674405 0.9878303197230877 1.0 10.028629883383775 -9.95666904357603 0.792352882755784 1.0108910395431323 1.176475925059389 0.26636331441242644 0.11431388241426467 0.6016867392638291 0.7693460791675203 0.04895201275376817 0.022932467752750662 1.1049203095635056e-10 9.95666904357603 0.16558488551625672 AVDIPHMDIEALKK ddPTM_A549_PD325901_60min_R1 2 AVDIPHMDIEALKK 14 1 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ; 95.264 1.5931e-05 5754000.0 1936.0700000000002 1824.95 2006.86 2092.7200000000003 2375.2 2196.3999999999996 2158.3 2097.96 2279.8 1738.8899999999999 2145.5 False True 2132.618401140596 1978.744941162582 2143.0575878295385 2221.9825614880415 2208.374145995165 2178.5132466140985 2240.435287567077 2056.114541982218 2183.9879342180598 1629.0961886391756 1881.6171014450717 1.1333965871710863 1.0516193436182721 1.1389445738900237 1.180889863182882 1.1736575652395727 1.1577877587002223 1.1906967075535373 1.0927380179544144 1.1606973238820846 0.8657958026572136 1.0 10.87775736222466 -10.760210559389574 0.7861862909318554 0.9901605761644889 1.143637500976331 0.6320683041277682 0.05693130651830129 0.3911643207608618 0.3834437460147919 0.038343123581007145 0.0075924481524306895 1.7369584934009628e-11 10.760210559389574 0.15347692481184216 AVDIT(ph)TPK ddPTM_A549_MK2206_60min_R1 1 AVDITTPK 8 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 AVDIT(0.5)T(0.5)PK 105.36 0.0021090999999999996 211790000.0 5099.4 5518.0 5294.3 4259.5 6491.3 4795.0 5455.2 5143.3 7315.7 7686.9 8680.3 True False 5960.054051639901 5798.842630716394 6045.111349792467 5303.077691216223 5536.43836897311 5302.4037173366005 6446.339226747446 5872.378525695647 5658.705630772322 5950.423951216089 6524.741945907448 0.9134543712304608 0.888746662901149 0.9264904880390216 0.8127643568405802 0.848529859858406 0.8126610617393778 0.9879837823763775 0.9000169775877517 0.8672688786292407 0.9119784353997952 1.0 12.671705128762751 -10.954574082423166 0.6191191439757321 1.0254194911139014 0.8806762021324694 0.12582321956038267 0.05478711693112153 0.9832652105604479 0.47450293159141727 0.08287247168993714 0.010056255705452146 1.1102631292922847e-11 10.954574082423166 -0.14474328898143196 AVDIT(ph)TPK ddPTM_A549_PD325901_60min_R1 1 AVDITTPK 8 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 AVDIT(0.5)T(0.5)PK 110.76 0.0016634 226370000.0 6530.1 5754.8 6987.7 6821.8 7174.8 6559.2 7079.7 7054.7 6789.7 6825.6 7269.7 True False 7193.030944794459 6239.777192472356 7461.927342453617 7243.167092568106 6670.866799716282 6505.784049895825 7349.121857660492 6913.988474194913 6504.352520817766 6394.630451135815 6375.572986425191 1.1282171751636743 0.9787006133814216 1.1703932114558928 1.1360809621331587 1.0463164352317553 1.0204234291957568 1.152699823734772 1.084449741053253 1.0201988957959969 1.002989137564765 1.0 12.638339290559362 -8.795351136469867 4.09662038328073 1.0087735807598361 1.0888615459443245 0.30770490504793335 0.05497921339534936 0.189899422901004 6.76354588656172 0.009396714531801461 0.0101206594156969 1.601949656045081e-09 8.795351136469867 0.08008796518448835 AVDITT(ph)PK ddPTM_A549_MK2206_60min_R1 1 AVDITTPK 8 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 AVDIT(0.067)T(0.933)PK 116.3 0.0013645 195660000.0 5240.2 5102.9 5418.9 4468.2 6731.8 4921.5 4916.6 4634.7 6763.7 7155.3 7883.9 True False 6124.617649410401 5362.615813751844 6187.381503388624 5562.909200585118 5741.561137561535 5442.289863372701 5809.88257849877 5291.68291817347 5231.732749409455 5538.912760428327 5926.110045429276 1.0334971174108099 0.9049133027639189 1.0440881887032898 0.9387117616682987 0.9688583393738898 0.9183578809121611 0.9803872243276767 0.8929437485311076 0.8828274718665772 0.9346624882034398 1.0 12.532869701464321 AVDITT(ph)PK ddPTM_A549_PD325901_60min_R1 3 AVDITTPK 8 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 AVDIT(0.017)T(0.983)PK;AVDIT(0.39)T(0.61)PK;AVDIT(0.027)T(0.973)PK 113.74 0.0014212 420722000.0 29649.9 29148.5 27878.5 30369.300000000003 30404.5 29569.0 31451.0 34378.5 31008.3 31402.5 34304.0 True False 32659.936020897272 31604.946391669644 29770.502657039262 32245.142687315452 28268.992809830743 29328.1998675707 32647.88501564756 33692.79384808849 29705.128985267933 29419.74079081582 30084.825470972613 1.085594997132666 1.0505278291264717 0.9895521144293615 1.0718075369400837 0.9396429052615286 0.9748502578440436 1.0851944295687512 1.1199265184568556 0.9873791361671341 0.9778930184986946 1.0 14.876748366934047 -5.538755484379195 3.519676257741637 1.0084642062982547 1.081782092114304 0.12670027456637956 0.05230544507264002 0.3081330206383267 7.7299938509936625 0.007316554771339857 0.04174481061305583 2.892307845482616e-06 5.538755484379195 0.07331788581604926 AVDPEDDFQREMS(ph)FYR ddPTM_A549_MK2206_60min_R1 1 AVDPEDDFQREMSFYR 16 1 H7C2Q8;Q99848 H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 1 AVDPEDDFQREMS(0.998)FY(0.002)R 43.184 0.043787 6330200.0 1664.0 1659.4 1963.6 1855.6 2964.7 2520.8 1642.1 1877.4 3601.7 2607.8 2833.3 True False 1944.8425191059341 1743.8563721295368 2242.068006431915 2310.222083301048 2528.596557314343 2787.549382828386 1940.448314313313 2143.527199296368 2785.920700733035 2018.696168804242 2129.7134148980554 0.9131944727873301 0.8188220818494545 1.0527557326483 1.0847572575447355 1.1872942808295084 1.3088847369456138 0.9111311882336985 1.0064862174890201 1.308119994570439 0.9478722135489166 1.0 11.05644359176934 -5.93450289369478 2.9373625881667875 1.1326582044573381 0.8646207210402885 0.2686085266382576 0.13147392972756955 0.22007432907682184 3.796344051711139 0.0199756315634014 0.07402024385142925 1.162778803407419e-06 5.93450289369478 -0.2680374834170496 AVDS(ph)S(ph)SEEIEVEVPVVDRR ddPTM_A549_PD325901_60min_R1 1 AVDSSSEEIEVEVPVVDRR 19 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 2 AVDS(0.667)S(0.667)S(0.667)EEIEVEVPVVDRR 59.861999999999995 0.0007582000000000001 995190.0 0.0 130.49 0.0 0.0 131.84 166.06 0.0 97.913 140.76 0.0 175.19 True False 0.0 141.4868502546948 0.0 0.0 122.58001322330865 164.70766241701753 0.0 95.96004840373743 134.8443467060856 0.0 153.6427406209099 0.0 0.9208821040480661 0.0 0.0 0.7978249589139795 1.0720172118213422 0.0 0.6245661071648302 0.8776486683402343 0.0 1.0 7.263435793232594 -8.291967582440272 0.39809050187134165 1.0301928879176574 0.2747776933612812 0.0 0.48071117650285233 0.9397437187214505 0.37241399199478403 0.17368405720150723 0.24169749886236644 5.105431076297487e-09 8.291967582440272 -0.7554151945563762 AVDS(ph)SSEEIEVEVPVVDR ddPTM_A549_PD325901_60min_R1 2 AVDSSSEEIEVEVPVVDR 18 0 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AVDS(0.821)S(0.089)S(0.089)EEIEVEVPVVDR;AVDS(0.333)S(0.333)S(0.333)EEIEVEVPVVDR 114.59 5.8297e-10 2133140.0 759.23 497.51 616.03 868.56 778.6099999999999 401.16 535.87 640.76 642.25 887.89 498.83000000000004 True False 836.306470684415 539.4369137114971 657.837500289323 922.2089785571192 723.9231196586793 397.8930859641743 556.2628260893152 627.979539133504 615.2584659845372 831.8284738717448 437.47707234390396 1.9116578297547633 1.2330632799138828 1.5037073754854793 2.1080167095754994 1.6547681362592597 0.9095175750179374 1.2715245238087196 1.4354570303968859 1.4063787678931845 1.9014218720423326 1.0 8.773063598759661 -7.192980600131133 10.487107586879999 1.2057004700995442 1.6715397822252034 0.189823339588429 0.32756757623542604 0.5337858809432358 80.21378830214651 0.04022614161214952 0.06970644948876453 6.41238219959778e-08 7.192980600131133 0.4658393121256592 AVDS(ph)SSEEIEVEVPVVDRR ddPTM_A549_MK2206_60min_R1 2 AVDSSSEEIEVEVPVVDRR 19 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AVDS(0.504)S(0.454)S(0.042)EEIEVEVPVVDRR;AVDS(0.704)S(0.123)S(0.173)EEIEVEVPVVDRR 252.31 1.7408999999999997e-97 33151400.0 1794.75 1689.69 1775.27 1396.77 1998.6999999999998 1832.74 1330.73 1721.81 2249.7200000000003 2277.4 2641.0899999999997 True False 2097.6599225753457 1775.688003750486 2027.0299805349268 1738.9787127033876 1704.6938776618802 2026.6793303256493 1572.5064157518764 1965.8818403219768 1740.1620120646166 1762.9337582770067 1985.2344626241845 1.0566308222367606 0.8944475008777002 1.0210531897857016 0.8759563393860877 0.8586864220604595 1.020876560669152 0.7921011071272946 0.9902517195492232 0.8765523895673166 0.8880229471468426 1.0 10.955093689052845 -5.249652679632146 23.56770337962098 0.9327654203279466 1.0566309914042962 0.20753713847308763 0.0729351800614353 997.8804503006418 1995193.9261243697 0.009604082054795873 0.20143487288624295 5.627912289400402e-06 5.249652679632146 0.12386557107634955 AVDS(ph)SSEEIEVEVPVVDRR ddPTM_A549_PD325901_60min_R1 1 AVDSSSEEIEVEVPVVDRR 19 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AVDS(0.417)S(0.417)S(0.166)EEIEVEVPVVDRR 401.81 0.0 56001000.0 3815.4 4190.8 3366.8 3744.7 4888.2 4292.8 4993.9 4500.8 4539.4 4323.9 5071.9 True False 4202.736599250971 4543.97342361388 3595.2912942130947 3976.0016141692518 4544.869695374521 4257.840860073302 5183.945597266937 4411.028013190707 4348.624804188727 4050.8882160786097 4448.088453423098 0.9448410577394628 1.0215564441208431 0.8082778325701415 0.8938674794359037 1.0217579400600596 0.9572293592310674 1.1654322191541735 0.9916682321809785 0.9776390127408937 0.9107031612559735 1.0 12.118969762032416 -6.762863777238309 24.99931819011927 1.0023095269240498 0.9168187600375881 0.23371628769021968 0.07519764278629046 41.15980753275846 722409.24132481 0.009963335806057816 0.0195861258271781 1.72637931097788e-07 6.762863777238309 -0.08549076688646173 AVDS(ph)SSMREDLFK ddPTM_A549_PD325901_60min_R1 1 AVDSSSMREDLFK 13 1 G3V220;O14776-2;O14776 G3V220 TCERG1 Transcription elongation regulator 1 1 AVDS(0.465)S(0.465)S(0.07)MREDLFK 45.33 0.013897999999999999 2638200.0 973.07 1194.6 1232.8 1049.7 1330.6 1362.8 1064.5 1011.5 1369.1 1400.5 1152.4 True False 1071.8553500637267 1295.2731344490646 1316.465221428627 1114.5375849583315 1237.1432463208012 1351.7018086349005 1105.0101300167516 991.3248389936011 1311.5614881735 1312.072190989174 1010.6621056654867 1.0605476786506667 1.2816084893142117 1.3025770077347258 1.102779631996241 1.224091849675302 1.3374418621789037 1.0933526881263052 0.9808667342294854 1.297725007023867 1.2982303221166278 1.0 9.981085026748783 -7.813136884393028 24.999217415183196 1.1264221378385249 1.2199192810809494 0.10572110254167921 0.12087303999005945 185.0577415871527 89487.00665935797 0.02087789097877936 0.028846966736543352 1.5376699088701783e-08 7.813136884393028 0.09349714324242453 AVDSNNQSKS(ph)PLEK ddPTM_A549_MK2206_60min_R1 2 AVDSNNQSKSPLEK 14 1 Q96JN0-3 Q96JN0-3 LCOR Ligand-dependent corepressor 1 AVDS(0.003)NNQS(0.056)KS(0.941)PLEK;AVDS(0.003)NNQS(0.195)KS(0.802)PLEK 98.573 1.0652e-05 14608200.0 4353.3 5366.0 5706.9 4513.4 7412.700000000001 5519.7 4860.700000000001 5664.0 8623.5 7884.4 8541.2 True False 5088.03061203357 5639.106479960886 6516.224234012165 5619.183202614226 6322.301649544313 6103.790990319672 5743.826272080094 6466.889345272514 6670.291018899781 6103.308564046386 6420.184314872151 0.7925053802968414 0.8783402786269043 1.014959059495775 0.8752370534904377 0.9847539166280481 0.950718965525715 0.8946513044453731 1.0072747180002561 1.0389563121183711 0.9506438234036783 1.0 12.648399000441911 -2.7551743709069227 0.2865751341237931 1.0183153777746021 5.3501747501379375e-11 0.4383188980296585 0.05412211699460012 16.357299150207805 0.301922134142577 0.018936547589594968 7.869239778768912 0.001757217942532421 2.7551743709069227 -1.0183153777211005 AVDSNNQSKS(ph)PLEK ddPTM_A549_PD325901_60min_R1 2 AVDSNNQSKSPLEK 14 1 Q96JN0-3 Q96JN0-3 LCOR Ligand-dependent corepressor 1 AVDSNNQS(0.03)KS(0.97)PLEK;AVDSNNQS(0.088)KS(0.912)PLEK 127.32 3.5354e-09 42461000.0 8875.1 9766.3 10479.4 10048.5 11159.4 10205.5 10237.0 11179.3 11574.6 11362.8 12306.2 True False 9776.093618496701 10589.340375832835 11190.595101751427 10669.173023200707 10375.602241840035 10122.389791622738 10626.574636901338 10956.320091508807 11088.159813755745 10645.35086881242 10792.6154154292 0.9058132104402357 0.9811653587409627 1.0368751846520234 0.9885623282701227 0.961361249563938 0.9378996102419899 0.9846153344544744 1.01516821176131 1.0273839460548213 0.9863550639999412 1.0 13.397756900505131 -8.155239853033825 4.298449082186822 1.0134391246483507 0.9721459704352133 0.2254738206401835 0.03216230666757776 0.24517956261960974 7.730864308241162 0.005258557321843805 0.006843372067971022 6.994555925625622e-09 8.155239853033825 -0.041293154213137395 AVDSQILPK ddPTM_A549_MK2206_60min_R1 2 AVDSQILPK 9 0 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 ; 93.649 0.00052664 3469000.0 3245.9 3337.3 3217.1 3048.9 3633.1 2851.7 2949.2 3028.9 3707.3 4184.3 4757.4 False True 3793.728565364151 3507.1543152391832 3673.3331551701517 3795.8806368703235 3098.6758027384676 3153.465001194742 3485.031464936863 3458.255850617219 2867.6024693415857 3239.0637238774407 3576.006282439558 1.0608842003420818 0.9807461280092036 1.0272166391900734 1.061486008990109 0.8665185567360204 0.8818398940405223 0.9745596594867747 0.9670720847442109 0.8019008477203519 0.9057768549745795 1.0 11.804133555757264 -6.758307289610663 24.999146987141163 0.9101472581206401 1.0284972732179967 0.5095142053317057 0.05585945509443325 71.77387191021798 572861.6574368133 0.011022275304189262 0.022199899858386045 1.7445873150784167e-07 6.758307289610663 0.11835001509735654 AVDSQILPK ddPTM_A549_PD325901_60min_R1 1 AVDSQILPK 9 0 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 116.52 0.00052822 8327600.0 4991.7 4535.6 4471.2 5360.9 6067.4 5659.4 5113.3 6039.8 6166.3 5993.4 6355.9 False True 5498.453709304683 4917.830929689585 4774.642519509796 5692.030617512734 5641.246755393676 5613.311722768091 5307.889429605126 5919.331450868558 5907.151854885871 5614.975701159956 5574.164593369717 0.9864175370502891 0.8822543445414548 0.8565664754838912 1.0211450562983402 1.012034478153686 1.0070229589999797 0.9522304805851415 1.061922616692985 1.059737608378524 1.007321475192674 1.0 12.444539887486371 -6.278349494044378 23.90315172080974 1.0227063323506174 0.9057969485239635 0.5691411402653906 0.04097473574667101 221.63246935940387 313286.653833185 0.006014652907937405 0.014015349566983613 5.268057492547385e-07 6.278349494044378 -0.11690938382665383 AVDSS(ph)SEEIEVEVPVVDRR ddPTM_A549_MK2206_60min_R1 2 AVDSSSEEIEVEVPVVDRR 19 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AVDS(0.386)S(0.536)S(0.078)EEIEVEVPVVDRR;AVDS(0.221)S(0.618)S(0.161)EEIEVEVPVVDRR 327.25 2.1092999999999997e-184 21838500.0 1847.91 2558.45 2287.8 1922.88 2536.74 2364.34 1616.3400000000001 1860.58 3484.8599999999997 2945.4300000000003 3505.3 True False 2159.792030938129 2688.6641769765038 2612.2444413907792 2393.9856863213645 2163.588906399159 2614.5328894781287 1910.008055756153 2124.3229127872783 2695.544774177896 2280.0553173100243 2634.837268641568 0.8197060428144178 1.0204289308396974 0.9914253424605473 0.9085895796348826 0.8211470712628228 0.9922938773467754 0.7249055106696923 0.8062444455564068 1.0230403244476753 0.8653495775416684 1.0 11.36349814634485 -8.785420035189313 24.993866363194194 1.0108801757875614 0.8904337500187721 0.05374745064452224 0.09701877916500848 215.6633394125936 224774.32734199133 0.015232005662965105 0.016219759717252844 1.6390038163611712e-09 8.785420035189313 -0.12044642576878928 AVDSS(ph)SEEIEVEVPVVDRR ddPTM_A549_PD325901_60min_R1 3 AVDSSSEEIEVEVPVVDRR 19 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 AVDS(0.146)S(0.814)S(0.04)EEIEVEVPVVDRR;AVDS(0.416)S(0.553)S(0.031)EEIEVEVPVVDRR;AVDS(0.195)S(0.579)S(0.226)EEIEVEVPVVDRR 377.54 3.298699999999998e-284 51657800.0 6939.099999999999 6969.7 6933.24 6950.0 7385.200000000001 7404.1 7928.9 8139.799999999999 7597.6 8109.200000000001 7088.9 True False 7643.552323704574 7557.0610791642775 7403.771359359036 7379.2857154047815 6866.489029556877 7343.803464421535 8230.63862836056 7977.445303450434 7278.2992933657 7597.1837280752725 6217.0102402395605 1.2294578950878556 1.2155458632271903 1.1908893621307186 1.1869508703142229 1.1044680263052438 1.1812435850416994 1.3238901514248445 1.2831642534246555 1.1707073033685793 1.2219995519554636 1.0 12.602005239849278 -10.133935465061056 0.8250181594374261 1.0105121365289238 1.2095952500898006 0.0 0.08344387331471648 0.284661377331844 0.38291568119068065 0.02981652729639382 0.01239793411480123 7.346230229626048e-11 10.133935465061056 0.19908311356087682 AVDSSS(ph)MREDLFK ddPTM_A549_MK2206_60min_R1 1 AVDSSSMREDLFK 13 1 G3V220;O14776-2;O14776 G3V220 TCERG1 Transcription elongation regulator 1 1 AVDS(0.295)S(0.332)S(0.373)MREDLFK 44.806999999999995 0.015606 1532500.0 524.63 719.17 685.92 524.43 843.48 638.68 409.86 489.85 1043.3 918.04 875.35 True False 613.1747180279721 755.7726811765688 783.1937701017406 652.9153735425571 719.4052093511992 706.2646936785277 484.32625668622745 559.2877376027091 806.9942158077506 710.6541263935293 657.976436569023 0.9319098434973345 1.14863183416947 1.190306713999753 0.9923081394025954 1.0933601408319311 1.0733890370927275 0.736084500550987 0.8500118036431213 1.2264788994812208 1.0800601463772637 1.0 9.361892108911958 -8.776516544056816 24.999229686256264 1.1069483428032818 1.009402849047988 0.09834502003173351 0.13352165279477046 483.39160304504156 801501.6371186033 0.026588582708180118 0.02836028017912002 1.6729519055899185e-09 8.776516544056816 -0.09754549375529376 AVDTEEDS(ph)PEEEMEDSQDEQHK ddPTM_A549_PD325901_60min_R1 1 AVDTEEDSPEEEMEDSQDEQHK 22 0 Q8IYY4-2;Q8IYY4 Q8IYY4-2 DZIP1L Zinc finger protein DZIP1L 1 AVDT(0.004)EEDS(0.994)PEEEMEDS(0.001)QDEQHK 79.762 2.858e-05 1420800.0 444.2 245.09 554.29 202.72 426.05 397.32 575.92 452.56 392.99 392.46 562.62 True False 489.294856997243 265.74459444342983 591.9074526165431 215.24155398947593 396.12571779270826 394.0843576510261 597.8369507555166 443.5333357735481 376.47399695953806 367.68000862235726 493.42130674203065 0.9916370661574511 0.5385754340405202 1.1995984861796873 0.43622265809856486 0.8028143746127481 0.7986772201895618 1.211615596219229 0.8988937642399686 0.7629869075685564 0.7451644337170604 1.0 8.946676204698072 -7.558594225733615 24.99953627387888 0.9124886477032985 0.7841209894453781 0.07534117322625467 0.22259378731979712 365.2507534661461 255660.9104244417 0.031914922508702225 0.047337563208833124 2.7631583516419893e-08 7.558594225733615 -0.1283676582579204 AVEES(ph)S(ph)DEER ddPTM_A549_MK2206_60min_R1 1 AVEESSDEER 10 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 AVEES(1)S(1)DEER 53.472 0.024316 1032800.0 133.57 211.17 140.06 166.43 187.03 146.18 309.67 291.37 170.19 225.96 275.26 True False 156.11335052703097 221.91765102000372 159.92261406643613 207.2053574713266 159.51813475714286 161.64867057356923 365.93303056659386 332.6725897832016 131.64223673758377 174.91547906396443 206.90534521047496 0.7545157925631369 1.0725563942983563 0.772926450516561 1.0014499976332 0.7709715502751882 0.7812687024065605 1.7686011455834918 1.6078491807197615 0.6362437693606726 0.8453888848837193 1.0 7.692827106161792 AVEES(ph)S(ph)DEER ddPTM_A549_PD325901_60min_R1 1 AVEESSDEER 10 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 AVEES(1)S(1)DEER 66.595 0.0057537 3435000.0 542.03 516.29 667.9 735.86 766.3 698.46 841.79 535.75 548.11 792.53 739.17 True False 597.056486578604 559.7995702199128 713.2277104089713 781.3124009406857 712.4777315914847 692.7719733336752 873.8247790951623 525.0640459622558 525.0748428038685 742.4895205459844 648.2567759846909 0.921018504853552 0.8635460375552371 1.1002240729772408 1.205251421790209 1.0990671566976578 1.0686690814474966 1.347960887516891 0.8099630662011864 0.8099797213940245 1.1453633005503963 1.0 9.340421570881709 AVEES(ph)S(ph)DEERQR ddPTM_A549_MK2206_60min_R1 2 AVEESSDEERQR 12 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 AVEES(1)S(1)DEERQR;AVEES(1)S(1)DEERQR 68.536 0.0012038 22511000.0 869.09 1062.58 1113.54 1170.53 1170.71 803.4200000000001 1035.0900000000001 811.0699999999999 1340.44 1732.75 1639.56 True False 1015.7711447895288 1116.6607833538642 1271.4567161754903 1457.309902547089 998.5001098301595 888.4373711329662 1223.1524545780203 926.0416562977014 1036.8324802428276 1341.3205715528604 1232.4120024460015 0.8242139339551224 0.9060774977341971 1.031681542902857 1.18248597032058 0.8101999232792356 0.7208931504802456 0.9924866458216867 0.7514059052165684 0.8413034587337661 1.0883702600191374 1.0 10.267268922610448 -5.281909228727926 5.147471561778747 0.919232833874708 0.821133896698047 0.04151343032174892 0.13750214520458406 0.4423217720445003 35.743581386831906 0.018098631441247525 0.14391819266524333 5.225053856948342e-06 5.281909228727926 -0.09809893717666096 AVEES(ph)S(ph)DEERQR ddPTM_A549_PD325901_60min_R1 4 AVEESSDEERQR 12 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 AVEES(1)S(1)DEERQR;AVEES(1)S(1)DEERQR;AVEES(1)S(1)DEERQR;AVEES(1)S(1)DEERQR 81.594 0.0012038 78081200.0 3735.5000000000005 3370.09 3409.0699999999997 3528.34 3539.7699999999995 3492.43 3777.21 3697.45 4199.96 4705.01 5022.77 True False 4114.725210070246 3654.0993116318855 3640.4299906032534 3746.2775483584633 3291.148766743561 3463.988807991475 3920.953793518621 3623.701459156588 4023.450286954329 4407.934865637968 4405.001131962372 0.9341030993645145 0.8295342503133548 0.8264311135333325 0.8504600648512307 0.7471391421135449 0.7863763718145317 0.8901141398281289 0.8226334910252964 0.9133823502928212 1.0006660006632708 1.0 12.104926674540192 -9.287397568267878 0.7906272219841702 0.985128483534984 0.8288226440251738 0.6233491860053118 0.048441669610201056 0.2484143783970866 0.3346719081902991 0.015000905748959643 0.011272951345597696 5.159438400911787e-10 9.287397568267878 -0.15630583950981014 AVEES(ph)SDEERQR ddPTM_A549_MK2206_60min_R1 3 AVEESSDEERQR 12 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 AVEES(0.5)S(0.5)DEERQR;AVEES(0.5)S(0.5)DEERQR;AVEES(0.5)S(0.5)DEERQR 104.41 4.9958000000000005e-05 30809400.0 1094.6 1383.6 1121.11 1092.07 1390.23 817.9000000000001 778.5 962.87 1449.33 1970.96 1965.3000000000002 True False 1279.341719599372 1454.019330166582 1280.1002560047273 1359.6271990248845 1185.7290086265448 904.44963512192 919.9433729327781 1099.3597711657048 1121.0590691044254 1525.7187671088307 1477.2617704793515 0.866022356473926 0.984266539094674 0.8665358310797903 0.9203698533291793 0.8026532821206033 0.6122473709100577 0.6227355173716225 0.744187518512022 0.7588763829857025 1.0328019025455153 1.0 10.528709778679646 -6.755039385835353 24.535220288431596 0.8266233910896164 0.9115990264872543 0.1255293286740553 0.12846000180519287 292.02015389965317 1119483.5370519543 0.021551335914411357 0.04400558015331342 1.7577641964356434e-07 6.755039385835353 0.08497563539763797 AVEES(ph)SDEERQR ddPTM_A549_PD325901_60min_R1 5 AVEESSDEERQR 12 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 AVEES(0.5)S(0.5)DEERQR;AVEES(0.5)S(0.5)DEERQR;AVEES(0.955)S(0.045)DEERQR;AVEES(0.5)S(0.5)DEERQR;AVEES(0.5)S(0.5)DEERQR 109.1 2.8925e-05 40643100.0 2453.3900000000003 2222.04 2206.9000000000005 2259.37 2849.75 2422.59 2568.16 2535.66 2415.5299999999997 2713.4300000000003 2799.17 True False 2702.4563467097405 2409.2991090500577 2356.6735051677783 2398.926153498431 2649.5933911037914 2402.861230247155 2665.892734151076 2485.0842721132112 2314.0136743318485 2542.103566723139 2454.8898354006074 1.1008462814661226 0.9814286060037762 0.9599915528523905 0.9772031799166077 1.0793125430296187 0.978806134432928 1.0859520845732924 1.0122997114889583 0.9426140598908913 1.035526535677842 1.0 11.261442568881364 -8.616010915937242 8.13772399369702 0.9729777588384061 1.0201562225751502 0.024987557160038643 0.050973509452618825 0.3340155488469419 25.89654007752075 0.008145201941900704 0.00923521754585022 2.4209681952399954e-09 8.616010915937242 0.04717846373674406 AVEFSSGAKS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 AVEFSSGAKSPSK 13 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 AVEFSSGAKS(0.99)PS(0.009)K;AVEFSSGAKS(0.935)PS(0.065)K 144.05 5.9042e-13 98773000.0 12451.3 14063.900000000001 13796.599999999999 12752.599999999999 17467.6 12350.5 12018.6 11566.8 17357.0 18739.7 18690.5 True False 14552.775034942137 14779.692438226217 15753.165337919398 15876.98757248596 14898.139179189806 13657.421712401607 14202.224048721757 13206.429321839358 13425.667213433464 14506.388754713103 14049.133018442126 1.0358486189744867 1.0520003205055497 1.1212909235922537 1.1301044378784393 1.0604312137719245 0.9721184712589507 1.0108968311481334 0.9400173878703717 0.9556224712094159 1.0325469006287251 1.0 13.778193483049968 -7.177119077820494 3.964641619523042 0.9774207035954832 1.0859851071582185 0.6428403648679176 0.0351334793124514 0.10049856466884918 2.9600778819442257 0.0050395689724560926 0.008907874215529812 6.650907720791557e-08 7.177119077820494 0.10856440356273533 AVEFSSGAKS(ph)PSK ddPTM_A549_PD325901_60min_R1 4 AVEFSSGAKSPSK 13 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 AVEFS(0.006)S(0.086)GAKS(0.791)PS(0.118)K;AVEFSS(0.001)GAKS(0.861)PS(0.139)K;AVEFSSGAKS(0.95)PS(0.05)K;AVEFSSGAKS(0.927)PS(0.073)K 157.8 5.496800000000001e-19 250251000.0 27309.9 26713.9 28252.0 29100.7 33151.7 29618.699999999997 32121.0 31391.0 30527.5 29210.0 33010.7 True False 30082.380943514225 28965.174105440205 30169.350613077215 30898.18414651509 30823.23895915624 29377.495127248672 33343.38223228564 30764.8818792369 29244.535337240894 27365.675614990214 28950.593172068442 1.0390937679486902 1.0005036488642944 1.0420978400603076 1.0672729212445182 1.0646841940666876 1.01474587938986 1.151733991566548 1.0626684467701644 1.010153234630648 0.9452544012601664 1.0 14.821305287613168 -8.804736236400728 6.241084851640759 1.00459248294563 1.0556477399275506 0.3456466201889542 0.040712271470879295 0.18275432078536716 17.517140737245704 0.006470167901285182 0.0069136743572721995 1.5677029067900952e-09 8.804736236400728 0.05105525698192048 AVEHINK ddPTM_A549_MK2206_60min_R1 2 AVEHINK 7 0 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 ; 99.919 0.012175 84425000.0 4968.200000000001 5019.2 4862.4 3985.3999999999996 5831.8 4612.9 5026.6 4629.2 6867.7 6505.9 6685.1 False True 5806.710699171932 5274.6558412634495 5551.961435360836 4961.823178911404 4973.949945338747 5101.0340162048005 5939.868154635713 5285.403276330425 5312.176915463329 5036.212671456212 5025.005170626122 1.1555631291914488 1.0496816743785002 1.1048668104492825 0.9874264822484063 0.9898397666163966 1.0151301029545419 1.1820620980367265 1.051820465225881 1.0571485471330222 1.0022303461289161 1.0 12.294909365457698 AVEHINK ddPTM_A549_PD325901_60min_R1 4 AVEHINK 7 0 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 ;;; 89.67299999999999 0.013572 137317000.0 13007.1 13030.4 13318.3 14231.2 15928.400000000001 13394.8 14043.5 15685.800000000001 15112.6 13554.5 14225.899999999998 False True 14327.571216679074 14128.517538192784 14222.159927443938 15110.228902599785 14809.64413399689 13285.71718983178 14577.933077398062 15372.93441372796 14477.469977482157 12698.666556774562 12476.204485410135 1.148391823285195 1.1324371570468317 1.1399428363069513 1.2111238574415735 1.1870312122020374 1.0648845332222874 1.1684589727946284 1.2321803823995756 1.16040659596533 1.0178309093622646 1.0 13.60689148338806 -10.535001923090904 0.8149379637882392 0.9984470030289434 1.160458963911229 0.6533970843192691 0.04228509257952902 0.313077130661161 0.3686732302975253 0.030601552954533665 0.00836786142571008 2.917414095428247e-11 10.535001923090904 0.16201196088228564 AVELAANTK ddPTM_A549_PD325901_60min_R1 2 AVELAANTK 9 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 123.86 0.00026260000000000004 68319000.0 27335.0 26882.0 28212.0 27614.0 35450.0 29607.0 29128.0 29842.0 30957.0 32303.0 33265.0 False True 30110.029077036554 29147.440482387214 30126.635972537686 29319.65406405576 32960.11429586084 29365.89040816957 30236.48197945321 29246.777899403878 29655.984945867385 30263.38306713552 29173.61588420897 1.0320979475613936 0.9991027714245073 1.0326671912083605 1.0050058306253986 1.1297918786166448 1.0065906991003015 1.0364324429122118 1.0025078144404618 1.016534428353789 1.0373545462191547 1.0 14.832376589745774 -8.167851277320873 2.2800707765093655 1.0075028210322665 1.0353754483393633 0.05700971984708514 0.03456578658657701 0.4836665718192368 4.929693748294791 0.005434307376743948 0.0071730964101006925 6.7943626343769415e-09 8.167851277320873 0.02787262730709683 AVEQEDELS(ph)DVS(ph)QGGSK ddPTM_A549_MK2206_60min_R1 1 AVEQEDELSDVSQGGSK 17 0 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 AVEQEDELS(0.994)DVS(0.97)QGGS(0.036)K 50.653 0.011454 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AVEQEDELS(ph)DVS(ph)QGGSK ddPTM_A549_PD325901_60min_R1 2 AVEQEDELSDVSQGGSK 17 0 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 AVEQEDELS(1)DVS(0.994)QGGS(0.006)K;AVEQEDELS(0.998)DVS(0.994)QGGS(0.008)K 86.455 2.5265e-05 3023700.0 1289.7 1342.62 1050.16 1191.3200000000002 1646.04 1261.5 1165.51 1444.06 1378.62 1292.25 1718.6100000000001 True False 1420.62939457304 1455.767299325299 1121.4301727250877 1264.9051307159746 1530.4278289297258 1251.2267622489915 1209.864120841544 1415.257090456845 1320.6813956801907 1210.657114463235 1507.231865166403 0.9425420384249892 0.965854911224676 0.7440329511619491 0.8392239840127884 1.0153897779760395 0.8301488252511515 0.8027060393312289 0.93897768695369 0.8762297468640523 0.8032321651649628 1.0 10.55768565580795 -10.692029569856635 0.6833422009453962 1.0111652274324088 0.8806483851410345 0.0 0.09485937600187808 1.0372224499607083 0.74362237632667 0.07896687497626463 0.014992567253523065 2.0322186383293953e-11 10.692029569856635 -0.13051684229137428 AVFGESGGGGGSGEDEQFLGFGS(ph)DEEVRVR ddPTM_A549_PD325901_60min_R1 1 AVFGESGGGGGSGEDEQFLGFGSDEEVRVR 30 1 Q03164-2;Q03164;Q03164-3;H7C5W4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 AVFGESGGGGGSGEDEQFLGFGS(1)DEEVRVR 74.05 4.0956e-06 4514400.0 1283.6 1430.6 1110.0 1077.5 1102.8 1003.3 1380.6 1397.7 1014.1 1293.1 1604.7 True False 1413.910127063623 1551.1616826911372 1185.3312749722397 1144.0547278199501 1025.343132453464 995.1294574430545 1433.1394884933084 1369.8217770255624 971.4809036277447 1211.453445318173 1407.3320730314178 1.0046741306890248 1.102200193128483 0.8422541471814932 0.8129245042754097 0.7285722766517052 0.7071035163005476 1.018337829398218 0.9733465208925015 0.6902996970254205 0.8608156301793656 1.0 10.45874707065622 -5.768752350132124 24.9778930982912 0.8485549150384496 1.0534371739902977 0.34138036030638097 0.10995828902106493 150.40451116142916 513723.5609180166 0.018737349435191696 0.06001884519376582 1.7031294153678543e-06 5.768752350132124 0.20488225895184808 AVFPS(ph)IVGRPR ddPTM_A549_PD325901_60min_R1 2 AVFPSIVGRPR 11 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P63267-2;Q6S8J3;A5A3E0;P0CG38;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 1 AVFPS(1)IVGRPR;AVFPS(1)IVGRPR 44.61600000000001 0.015119 3106900.0 669.35 581.83 509.53000000000003 471.31000000000006 574.8 416.23 477.42 508.94000000000005 479.77 459.6 485.61 True False 737.3019192505737 630.8628560325627 544.1097698527973 500.42174827732754 534.4280309523498 412.84036088061663 495.58847935424836 498.7887924442941 459.60693534511694 430.58077756417345 425.883048535419 1.7312309606735974 1.4813053917080157 1.277603726478317 1.1750215229233512 1.2548703987872003 0.9693749546978796 1.1636727055902818 1.1711872406276622 1.0791857927327044 1.0110305611949328 1.0 8.734313497074131 -2.000000000010619 0.3968684752157824 1.0401011222416536 12.322948948193424 0.8957698180023559 0.06988641761952459 12.341117781576338 0.14415414563946558 0.015561857173676703 109.98558216431421 0.009999999999755487 2.000000000010619 11.282847825951771 up AVFPSIVGR ddPTM_A549_MK2206_60min_R1 2 AVFPSIVGR 9 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P63267-2;Q6S8J3;A5A3E0;P0CG38;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 187.8 8.299899999999999e-11 46070000.0 4942.0 4474.6 4221.2 4895.2 5986.799999999999 4375.9 3826.2 4348.9 6730.799999999999 6032.900000000001 5988.2 False True 5776.088779700434 4702.338027438124 4819.829633708697 6094.524219753878 5106.149650666005 4838.954833512664 4521.371012864991 4965.36989294768 5206.284546878948 4670.063699968982 4501.164674087649 1.2832431599208716 1.0446936221881844 1.0707961122719063 1.353988281041771 1.1344063193380016 1.0750450569759442 1.0044891356438628 1.1031300235542085 1.156652760751132 1.0375234051874738 1.0 12.136082631021578 -7.126830909980188 4.630342892092944 1.0726276442748381 1.1771272553061902 0.28657379051626586 0.09097366814600095 0.29226176127912706 9.798002629383392 0.014424692948051699 0.0254875789283315 7.467394404581477e-08 7.126830909980188 0.10449961103135208 AVFPSIVGR ddPTM_A549_PD325901_60min_R1 2 AVFPSIVGR 9 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P63267-2;Q6S8J3;A5A3E0;P0CG38;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 180.93 1.7041e-10 77990000.0 7621.0 7571.1 8029.3 7778.4 9064.4 8404.8 7494.1 8421.2 7841.0 8631.8 8887.8 False True 8394.678309716326 8209.143167777764 8574.216582103241 8258.854101971876 8427.747814482393 8336.354095402561 7779.292076428871 8253.2325596964 7511.470037812001 8086.7866748878005 7794.656944406208 1.0769785469186968 1.0531756851299285 1.1000120522631185 1.059553250499215 1.0812211332187645 1.0694959579183403 0.9980287948415275 1.0588320459208005 0.9636690994082254 1.037478202384678 1.0 12.928269813615298 -8.087804399302497 1.1203403874481082 0.9841472765245809 1.0750132674529957 0.4480419956539734 0.02949080532549954 0.18068778343301944 0.4489459243794825 0.004721048157870664 0.006714520302602207 8.169502324811923e-09 8.087804399302497 0.09086599092841485 AVFPSIVGRPR ddPTM_A549_MK2206_60min_R1 4 AVFPSIVGRPR 11 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P63267-2;Q6S8J3;A5A3E0;P0CG38;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;; 188.28 7.795300000000001e-19 120626000.0 3237.36 3008.3 2735.402 2543.84 4644.78 3066.51 2873.34 3120.62 4403.79 4131.18 3901.27 False True 3783.7472221471044 3161.4096205118008 3123.32313553161 3167.0809141973177 3961.5390149028585 3391.006052815404 3395.388684884609 3562.9774414979356 3406.338596407567 3197.9435687708815 2932.476989425521 1.2902905072371427 1.0780680059594017 1.065080185383987 1.0800019661254892 1.350919045294515 1.1563623738714177 1.15785688928791 1.2150061038316728 1.161590903761832 1.0905263980937037 1.0 11.517904072413932 -10.461432968984228 0.7652791318064692 0.997988428984286 1.1697769208982238 0.21668170102178952 0.08762915121196378 0.5977480831249066 0.6234903284503932 0.05912323468614696 0.016569882863054608 3.455946661382559e-11 10.461432968984228 0.17178849191393786 AVFPSIVGRPR ddPTM_A549_PD325901_60min_R1 2 AVFPSIVGRPR 11 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P63267-2;Q6S8J3;A5A3E0;P0CG38;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 201.48 4.2259000000000004e-24 243050000.0 4922.200000000001 4609.5 4617.4 5107.1 5266.0 5156.7 5347.6 5699.1 6058.0 5341.3 6330.6 False True 5421.898120467878 4997.958742041655 4930.7645306818185 5422.553967934358 4896.134326713766 5114.705544898437 5551.105844319003 5585.42697964254 5803.403327262478 5004.04940644804 5551.976332979805 0.9765708272675375 0.9002125445587403 0.8881097891920271 0.9766889559170753 0.8818723339344565 0.921240516555538 0.9998432110281826 1.006024998064929 1.045286034954643 0.9013095709221643 1.0 12.438785702656531 -7.838352869534442 3.564635621161818 1.0202200953028637 0.9214589326006397 0.24323724809556557 0.047334014743938065 0.100731793582892 2.5495237012180105 0.004976563752963322 0.0070942544522331966 1.4509322384794589e-08 7.838352869534442 -0.09876116270222401 AVFVDLEPTVIDEVR ddPTM_A549_MK2206_60min_R1 1 AVFVDLEPTVIDEVR 15 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;Q71U36-2;Q71U36;P68363;P68363-2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain 0 273.3 7.795399999999997e-91 35169000.0 14371.0 14884.0 16202.0 15323.0 22719.0 17394.0 17320.0 16137.0 24102.0 21708.0 22604.0 False True 16796.473462783277 15641.53202529591 18499.687227648144 19077.135687875605 19377.06519567731 19234.621534797265 20466.819806288655 18424.46916748987 18642.93548298516 16804.14772313922 16990.80296133683 0.9885626654022321 0.9205881594229988 1.0888059422350334 1.1227918851914356 1.1404443474372874 1.132060773029169 1.2045822585819883 1.084378955451099 1.097236871347859 0.9890143368372671 1.0 14.052466413411512 -5.768332547344186 24.997917263252262 1.0792285790434253 0.9545754036437395 0.4215520865132799 0.06128808464738461 124.2630309336797 450643.9407160352 0.009740602626664995 0.031266889713068576 1.7047765100890116e-06 5.768332547344186 -0.12465317539968579 AVGMPS(ph)PVSPK ddPTM_A549_MK2206_60min_R1 1 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.992)PVS(0.008)PK 55.531000000000006 0.0059851999999999995 2003200.0 2554.2 2598.3 2875.7 2664.3 3556.5 2405.3 2694.8 2207.0 3592.1 4117.7 4016.9 True False 2985.286515805513 2730.5423717633944 3283.5175015768273 3317.0536196049734 3033.343561267063 2659.8272494910807 3184.410277943802 2519.8490086540332 2778.4950854049875 3187.508710133148 3019.392869199871 0.9887042346352908 0.904334907728314 1.0874760734421913 1.0985829811819028 1.0046203633218782 0.8809145959849625 1.0546525132344438 0.8345548651049789 0.9202164825080479 1.0556786904573392 1.0 11.560042770420786 -7.020627301222065 24.473429043276482 0.9529800966067035 1.020769306909422 0.1225668882924954 0.07889952057692341 849.0408878199128 1007352.3267706997 0.010927495586319147 0.019077788336044715 9.536141766743091e-08 7.020627301222065 0.06778921030271845 AVGMPS(ph)PVSPK ddPTM_A549_PD325901_60min_R1 2 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.999)PVS(0.001)PK;AVGMPS(0.997)PVS(0.003)PK 99.215 9.7235e-05 14172100.0 5122.6 5935.799999999999 4534.0 5132.6 6436.8 7226.5 5778.299999999999 5655.5 6059.6 6441.5 6636.4 True False 5642.642580941196 6436.030697691909 4841.7045051568775 5449.629045019656 5984.7013737545 7167.649779938438 5998.196368507083 5542.69661584608 5804.936084826626 6034.782590686733 5820.164871605721 0.9694987522551833 1.105815872861395 0.8318844245766364 0.9363358539216368 1.028270075810307 1.2315200579465648 1.0305887377469163 0.9523263924853231 0.9973834440922129 1.0368748521417404 1.0 12.50684430653773 -6.771111513570046 24.389974679959842 1.0172202520832416 0.9620217854870541 0.12006142003953957 0.09037342943629155 327.0678030089971 824760.249560524 0.013385470142378323 0.025536039029494518 1.6939028020540387e-07 6.771111513570046 -0.055198466596187545 AVGMPSPVS(ph)PK ddPTM_A549_MK2206_60min_R1 5 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.009)PVS(0.991)PK;AVGMPS(0.001)PVS(0.999)PK;AVGMPS(0.004)PVS(0.996)PK;AVGMPSPVS(1)PK;AVGMPSPVS(1)PK 162.49 1.5787000000000001e-13 53905300.0 13756.6 14720.300000000001 13268.3 12262.699999999999 18168.5 14197.5 13693.7 12876.599999999999 20476.3 19036.4 20872.1 True False 16078.377763421086 15469.50039451514 15149.944453931852 15267.062050493518 15495.937717666418 15699.87002646223 16181.66803587614 14701.897482933633 15838.450743932004 14736.064018646006 15688.981529345165 1.024819726720156 0.9860104918589202 0.9656423156337407 0.973107274168022 0.9876955804098774 1.0006940219221176 1.0314033454376526 0.9370842495693389 1.009527018328581 0.939261990402832 1.0 13.937464080468963 -7.231519047254988 5.393131829559634 1.0010006743034956 0.9852451525729538 0.0 0.031617105667694885 0.4106493910756969 35.08087951446968 0.0036781710359430828 0.0063270491833088095 5.8678763376615035e-08 7.231519047254988 -0.015755521730541844 AVGMPSPVS(ph)PK ddPTM_A549_PD325901_60min_R1 4 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.045)PVS(0.955)PK;AVGMPS(0.047)PVS(0.953)PK;AVGMPS(0.001)PVS(0.999)PK;AVGMPSPVS(1)PK 146.36 1.9367000000000003e-11 71127000.0 16627.8 17073.5 16155.3 17034.6 21960.600000000002 20950.5 19295.9 20437.1 19940.9 19881.9 21503.899999999998 True False 18315.842015260594 18512.34376445347 17251.69580771083 18086.788553616436 20418.163215957153 20779.88607411614 20030.216033621626 20029.466007905212 19102.853319347698 18626.55344093373 18859.056624453373 0.9711960879056682 0.981615577761703 0.9147698186208116 0.9590505460471663 1.082671504866377 1.1018518310811023 1.0621006359167342 1.062060865861882 1.0129273006465345 0.9876715369093186 1.0 14.202969890278123 -6.650204355640094 9.975870668933103 1.0266102762162996 0.9549190249119489 0.5150887262250299 0.0385232652202324 0.2597663715293811 21.97557184087057 0.006344113812987243 0.013213694369701231 2.2376679645335397e-07 6.650204355640094 -0.07169125130435072 AVGNGAAEIS(ph)LKSPR ddPTM_A549_PD325901_60min_R1 1 AVGNGAAEISLKSPR 15 1 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 AVGNGAAEIS(0.563)LKS(0.437)PR 42.068000000000005 0.023559 4107800.0 2026.0 1855.6 2284.1 2761.8 2844.4 2243.0 2423.0 2333.2 3041.6 2236.5 2328.7 True False 2231.6780285376276 2011.977924228765 2439.112761409093 2932.390113497112 2644.6191566472926 2224.7337516642788 2515.208590916474 2286.6624956400083 2913.7721294489206 2095.287008316523 2042.2846628455568 1.0927360270277824 0.9851603749623401 1.1943059681066337 1.435838091939325 1.2949317030871157 1.0893357777874666 1.2315661164550795 1.1196590452057524 1.4267218387612541 1.0259524768682917 1.0 10.9959682542338 -11.173598129860336 1.5885875962744138 1.0003444055165684 1.2377733504709956 0.2114867354654536 0.13528758902997765 0.45140000620086024 2.0505895273647257 0.11053814448276712 0.023496709781136025 6.7050476745455946e-12 11.173598129860336 0.23742894495442712 AVGPAS(ph)ILK ddPTM_A549_MK2206_60min_R1 2 AVGPASILK 9 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 AVGPAS(1)ILK;AVGPAS(1)ILK 52.49 0.023842 1584160.0 1212.33 1391.83 1266.99 1067.57 1561.6100000000001 1194.1200000000001 1108.53 1458.27 2270.77 1839.73 2234.74 True False 1416.9416653772214 1462.6682020134103 1446.6682335858475 1329.124697925038 1331.899237652258 1320.480985807296 1309.9355519552626 1664.9842382645743 1756.4442206745584 1424.1337152520232 1679.7923823136555 0.8435219020493487 0.8707434427097532 0.8612184748649024 0.7912434369385419 0.7928951528032124 0.7860977342857911 0.779819914500998 0.9911845391103123 1.0456317335213337 0.8478034132352108 1.0 10.714067215573143 -8.337068111308746 5.124433633087139 1.0210864288894788 0.818542388504564 0.5532627707765003 0.0607513992067384 0.05244901389051157 2.523599844387459 0.005967245455969137 0.007255580774105066 4.601843962436718e-09 8.337068111308746 -0.2025440403849148 AVGPSGGGGET(ph)PR ddPTM_A549_MK2206_60min_R1 2 AVGPSGGGGETPR 13 0 Q9H330;Q9H330-4 Q9H330 TMEM245 Transmembrane protein 245 1 AVGPS(0.001)GGGGET(0.999)PR;AVGPSGGGGET(1)PR 140.33 1.0409000000000002e-09 63587000.0 5388.4 5608.1 4633.9 4709.799999999999 6706.5 5001.8 4556.1 4583.1 8335.2 7780.2 8524.5 True False 6297.830186268278 5893.528335868179 5291.056699432088 5863.701211430954 5719.982734046826 5531.087156073872 5383.884394886358 5232.768460155095 6447.290508579281 6022.64741641643 6407.6313857687 0.9828639956186791 0.9197670685235827 0.8257429900202256 0.915112130896635 0.8926828635540528 0.8632030813068264 0.8402300430146347 0.8166462995635226 1.0061893577240826 0.9399178969303202 1.0 12.64557544033323 -8.78050381219856 24.977041115342868 1.0029227736263089 0.8808494559459299 0.43762159716122495 0.048938219380339466 115.07117444959856 150758.50315035967 0.007881321329192281 0.008396929209424349 1.6576627859676584e-09 8.78050381219856 -0.12207331768037899 AVGPSGGGGET(ph)PR ddPTM_A549_PD325901_60min_R1 2 AVGPSGGGGETPR 13 0 Q9H330;Q9H330-4 Q9H330 TMEM245 Transmembrane protein 245 1 AVGPSGGGGET(1)PR;AVGPSGGGGET(1)PR 164.56 6.2585e-19 94381000.0 18131.1 16590.300000000003 16417.3 17773.0 19960.5 19545.4 19124.699999999997 17136.6 18602.8 19749.4 20122.4 True False 19971.75592458965 17988.422804662914 17531.476703244804 18870.797844588367 18558.543339986732 19386.228742656727 19852.5009239374 16794.797069597375 17820.989008979595 18502.419513546323 17647.47236640331 1.1317063152120999 1.0193200720862832 0.9934270664517749 1.0693201526420284 1.051626145357671 1.0985272190913642 1.1249486902006405 0.9516828654493754 1.0098323793330664 1.0484458697195997 1.0 14.10717394176586 -8.267137330341297 24.999472741522677 1.000800786590097 1.0653402937133452 0.3482984376116628 0.04402180366818291 393.47022424076886 1726325.6145608062 0.006823529172937028 0.008362532281017788 5.405833554599419e-09 8.267137330341297 0.06453950712324819 AVHGVEET(ph)SSEVKPPNE ddPTM_A549_MK2206_60min_R1 1 AVHGVEETSSEVKPPNE 17 1 Q7Z6I8 Q7Z6I8 C5orf24 UPF0461 protein C5orf24 1 AVHGVEET(0.333)S(0.333)S(0.333)EVKPPNE 52.298 0.0064054 4493200.0 1276.5 1366.3 1065.0 1134.5 1448.4 1071.5 946.32 1046.9 1478.1 1419.5 1592.8 True False 1491.941992571349 1435.8388340608567 1216.0330142849814 1412.4525509296395 1235.3422786838776 1184.8854187958648 1118.2540946355127 1195.301280996787 1143.3127100406753 1098.8339641144337 1197.2638009563482 1.2461263686245405 1.199266889146686 1.0156767567127987 1.1797337811444757 1.0318045845010206 0.9896611071423058 0.9340081056006836 0.9983608291188679 0.9549380087558164 0.9177876782349129 1.0 10.225525350393886 -5.535987486589798 0.5457105687629931 0.9749020347714333 1.3758988717752099 0.7432317297986603 0.05449950894692097 1.065438590938791 0.25284549980884763 0.009481373584844565 0.2542531327642273 2.910800986325434e-06 5.535987486589798 0.40099683700377653 AVHGVEETS(ph)SEVKPPNE ddPTM_A549_MK2206_60min_R1 1 AVHGVEETSSEVKPPNE 17 1 Q7Z6I8 Q7Z6I8 C5orf24 UPF0461 protein C5orf24 1 AVHGVEET(0.473)S(0.519)S(0.008)EVKPPNE 84.249 3.1575e-05 5081700.0 1551.9 1339.0 1165.6 1046.6 1758.2 1702.7 1393.5 1487.5 1999.1 2154.0 2260.4 True False 1813.8227796877993 1407.149380668585 1330.8996069958446 1303.0170469836592 1499.571109073457 1882.8785838392146 1646.6809122438353 1698.3576802776956 1546.3070419067144 1667.4099039820294 1699.0802961336817 1.0675321135882856 0.8281829786800565 0.7833058920313268 0.7668955080867698 0.8825781291712845 1.1081751628359016 0.9691601485762132 0.9995747017621059 0.9100847355039027 0.9813602734233812 1.0 10.730538318524149 -7.017663915949953 24.608925769986044 0.971434871135382 0.8499194907036492 0.3349541509436895 0.08703778383070541 582.8736461806556 812045.7905521677 0.012881997775252048 0.022631388442133624 9.601433626747411e-08 7.017663915949953 -0.12151538043173271 AVHHLHYIER ddPTM_A549_MK2206_60min_R1 1 AVHHLHYIER 10 0 P82675 P82675 MRPS5 28S ribosomal protein S5, mitochondrial 0 81.33800000000001 0.0011057999999999999 5246300.0 605.87 442.31 401.96 373.86 845.65 640.04 480.65 691.08 676.35 750.96 904.43 False True 708.1260439006685 464.821689741241 458.9639722272218 465.4557167832133 721.2560052257811 707.7686079758331 567.9778833656254 789.0427063437376 523.1578049090122 581.3176144356288 679.8350700018517 1.0416144667246128 0.6837271424376136 0.6751107621234834 0.6846597613476244 1.0609279177430735 1.0410886981366014 0.8354642301169876 1.1606384271137828 0.7695363596167335 0.8550862408937588 1.0 9.409040976503864 -6.7482992932551475 24.99924663764537 0.9266000765259085 0.7581553077269496 0.2657060385978338 0.14383981399489879 281.87799165250357 536274.5496288185 0.02143539780669272 0.044410707787520425 1.785256844304e-07 6.7482992932551475 -0.16844476879895887 AVHS(ph)PIR ddPTM_A549_MK2206_60min_R1 4 AVHSPIR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR 126.82 0.0017924 375618000.0 11715.5 13199.2 12484.099999999999 10637.53 15358.4 11737.800000000001 11794.2 11549.0 16093.7 17392.3 16654.6 True False 13692.789983524983 13870.98290165854 14254.53310200482 13243.725327536877 13099.199705149449 12979.886205078945 13937.053473402395 13186.106117329151 12448.502646357902 13463.367350523058 12518.80317642365 1.0937778788081176 1.1080119006728548 1.1386498294701228 1.0579066657488836 1.0463619820957681 1.0368312387500143 1.1132896074003065 1.0533040524322816 0.9943844048768062 1.0754516354948598 1.0 13.611809023771137 -7.8991641937243795 0.4538958694171597 0.9912059500660834 1.1108179010183736 0.2061848352461414 0.039005219110351624 0.47944148530716346 0.2148842315532171 0.010930316253405459 0.021083271955790735 1.2613505655962776e-08 7.8991641937243795 0.11961195095229027 AVHS(ph)PIR ddPTM_A549_PD325901_60min_R1 4 AVHSPIR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR 113.74 0.0022960000000000003 431107000.0 19297.5 20046.699999999997 21421.1 19077.1 22011.1 20573.3 21532.4 21875.0 19957.3 22372.0 23723.1 True False 21256.567993931334 21736.105762899773 22874.86466153859 20255.44913976238 20465.116270172708 20405.757865855867 22351.82726498139 21438.68596439448 19118.564084380225 20959.42810197059 20805.309093121232 1.0216896033022311 1.0447384206412145 1.099472474028353 0.9735711711420499 0.9836487493924808 0.980795708178281 1.0743328621044845 1.030443040689199 0.9189271833842311 1.0074076769616613 1.0 14.344664101424105 -8.73748147635385 24.96270090208146 0.9617156131070094 1.0260878651701524 0.20020624879401994 0.04274002798575014 214.57882511008847 223578.19103863006 0.007922568963852522 0.008981107924431755 1.8302841704235863e-09 8.73748147635385 0.06437225206314301 AVIT(ph)PDFEK ddPTM_A549_MK2206_60min_R1 1 AVITPDFEK 9 0 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 AVIT(1)PDFEK 58.592 0.011729999999999999 2003300.0 1834.3 1573.8 1945.5 1831.5 2837.8 2416.4 2109.7 1817.6 2892.5 2712.9 2707.2 True False 2143.884995670681 1653.8996977566967 2221.401154264254 2280.21758221916 2420.3633792109276 2672.101844123498 2493.0051816008754 2075.250366166548 2237.3533683733544 2100.0540058091215 2034.9275250810065 1.0535436615047689 0.8127560698707725 1.0916364965753875 1.1205399475484459 1.1894101138145339 1.3131189249686555 1.2251076025430605 1.0198153696328502 1.0994757016146262 1.0320043244417378 1.0 10.990761697793333 -5.798698241370834 23.257940726404023 1.092290776837295 0.9331500443136177 0.2903080119056515 0.10577922279449717 78.20310251897858 48816.34546770793 0.016209190148780726 0.0503996746736782 1.5896508940166494e-06 5.798698241370834 -0.15914073252367722 AVIT(ph)PDFEK ddPTM_A549_PD325901_60min_R1 1 AVITPDFEK 9 0 Q5QJE6 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 AVIT(1)PDFEK 81.017 0.0017239 2235800.0 3046.1 3231.7 2785.8 3282.7 3425.3 3323.4 2852.2 2481.4 3356.1 2956.3 3400.8 True False 3355.3378295796997 3504.046700652137 2974.861140376274 3485.4649234473795 3184.718744643499 3296.335332269759 2960.7420317837264 2431.906530379357 3215.054788152129 2769.6387134746856 2982.523159447402 1.1249997569847445 1.1748598462857744 0.9974310278038049 1.168629625693556 1.0677934669360822 1.1052170112504673 0.9926970801233572 0.8153856316843947 1.0779647353175323 0.928622701453839 1.0 11.542317625228087 -7.752406204297224 24.14407624991234 1.0146136137833426 1.1057048514260102 0.36647148833443477 0.0820578800217697 148.8974445881886 397974.1727200065 0.012508673863564947 0.018394524658145794 1.7684541141032728e-08 7.752406204297224 0.09109123764266758 AVIVSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 AVIVSSPK 8 0 Q14966-3;Q14966;Q14966-5 Q14966-3 ZNF638 Zinc finger protein 638 1 AVIVS(0.079)S(0.921)PK;AVIVS(0.065)S(0.935)PK 127.94 0.0010641 450390000.0 10345.2 11268.2 11828.1 10997.2 14744.6 10544.1 11898.4 10653.8 16842.0 15373.099999999999 15709.099999999999 True False 12091.216844143446 11841.703249626393 13505.502437806754 13691.514493683075 12575.688872053513 11659.869663392885 14060.185264615746 12164.008775894124 13027.313891147463 11900.306032918352 11808.096920896134 1.0239767614666415 1.0028460410644824 1.1437492873137598 1.1595022115252087 1.0650055598543584 0.987446981635039 1.1907240733885083 1.0301413392337722 1.103252622198057 1.007808973168152 1.0 13.527488847754363 -10.866704432347655 1.0026116706392838 0.9978098859323151 1.0810886139723916 0.17122937173496944 0.06299646970646376 0.7956916443810942 1.3567635696122793 0.049122914823868116 0.010686433915573288 1.35923818816145e-11 10.866704432347655 0.08327872804007652 AVIVSS(ph)PK ddPTM_A549_PD325901_60min_R1 4 AVIVSSPK 8 0 Q14966-3;Q14966;Q14966-5 Q14966-3 ZNF638 Zinc finger protein 638 1 AVIVS(0.073)S(0.927)PK;AVIVS(0.049)S(0.951)PK;AVIVS(0.057)S(0.943)PK;AVIVS(0.068)S(0.932)PK 139.43 0.0010688 704450000.0 28995.0 27236.0 29219.6 30551.9 34962.8 34075.1 31861.2 33630.8 32915.3 30163.4 31725.0 True False 31938.551055009168 29531.273304750313 31202.61776772868 32439.021474600755 32507.13354311206 33797.603683163376 33073.69540111764 32960.00731114779 31531.984407039054 28258.87777628196 27823.026121344647 1.1479179480950588 1.0613968867353063 1.1214674360597805 1.1659055824166773 1.168353629160919 1.2147350017126746 1.1887166858440643 1.1846305706431506 1.1333053518161007 1.0156651419955698 1.0 14.763991720092106 -10.24279978559088 0.7866581797783397 1.0044859753062185 1.1548789207944714 0.6741369115228594 0.039015783906540875 0.3011689599041984 0.35723699375997797 0.024487931781846033 0.008848752593635668 5.717421551838673e-11 10.24279978559088 0.15039294548825288 AVKEERS(ph)PK ddPTM_A549_MK2206_60min_R1 4 AVKEERSPK 9 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 AVKEERS(1)PK;AVKEERS(1)PK;AVKEERS(1)PK;AVKEERS(1)PK 87.363 0.00023605 501279000.0 30989.8 33105.1 25832.6 15745.2 10505.599999999999 10059.9 9220.7 10199.4 11585.0 45953.100000000006 44849.2 True False 36220.12061213282 34790.00818668524 29496.051121895016 19602.774706828895 8960.240156684165 11124.431940778828 10895.981835325965 11645.196184352495 8961.015997443496 35572.262794185976 33711.905865049885 1.0744014520307283 1.031979868653853 0.8749446335063018 0.5814792787242463 0.2657885968403082 0.32998525759149827 0.3232087167940911 0.345432745065458 0.26581161069073944 1.0551839737742261 1.0 15.040970570334412 -2.5377209380291568 12.34265553460207 0.6179165330137653 0.9663419094733556 0.0 0.34063912208023256 0.0 0.0 0.04991475900301302 0.0 0.0028992059144633603 2.5377209380291568 0.3484253764595904 AVKEERS(ph)PK ddPTM_A549_PD325901_60min_R1 6 AVKEERSPK 9 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 AVKEERS(1)PK;AVKEERS(1)PK;AVKEERS(1)PK;AVKEERS(1)PK;AVKEERS(1)PK;AVKEERS(1)PK 110.38 0.00011952 1178446700.0 73245.5 70813.5 65164.8 66522.5 68940.7 60455.1 51312.899999999994 58199.1 62137.6 76799.5 86239.3 True False 80681.32923951297 76781.20216499995 69587.27519577566 70631.44374144103 64098.5430645036 59962.77370942452 53265.640488996294 57038.27329418929 59526.1727613247 71950.36646331543 75632.41281596466 1.0667559877513595 1.0151891141147462 0.9200721305176583 0.9338779646407365 0.8475009678783318 0.7928184686548495 0.7042700147436373 0.7541511789790412 0.787045798818675 0.9513165557522446 1.0 16.2067170238816 -5.784025912396317 1.231698094688247 0.8616707268069876 1.0842283861265292 0.449049620921558 0.08385139462369282 0.707771689129306 1.5533077917922933 0.016318033739993985 0.15708106247707027 1.6442736138849173e-06 5.784025912396317 0.22255765931954152 AVLASQTSLT(ph)PLGR ddPTM_A549_MK2206_60min_R1 1 AVLASQTSLTPLGR 14 0 E7EPP7;Q6ZWJ1 E7EPP7 STXBP4 Syntaxin-binding protein 4 1 AVLASQT(0.001)S(0.002)LT(0.997)PLGR 104.55 2.4538e-05 2003800.0 1727.8 1714.5 1666.1 2005.2 2366.0 1753.6 2153.5 1679.8 2908.4 2306.9 2601.1 True False 2019.410399345692 1801.760726778407 1902.37803295794 2496.474090016849 2017.9645342212486 1939.164788054528 2544.763074644491 1917.9167941717458 2249.652043760437 1785.7696877883686 1955.1750832920363 1.0328539968632882 0.9215342105038915 0.9729962545117959 1.2768544931604784 1.0321144901373693 0.9918113240219126 1.3015525291779664 0.9809437582144528 1.1506141127640466 0.9133553833867244 1.0 10.933082089374867 -6.061449207185175 24.999816237378024 1.0865027142603831 0.9697085613555704 0.13406744805999604 0.11810186574682525 273.2303480906654 111159.82688149005 0.014511267667275892 0.03839326367934898 8.680620953656177e-07 6.061449207185175 -0.11679415290481276 AVLASQTSLT(ph)PLGR ddPTM_A549_PD325901_60min_R1 1 AVLASQTSLTPLGR 14 0 E7EPP7;Q6ZWJ1 E7EPP7 STXBP4 Syntaxin-binding protein 4 1 AVLAS(0.001)QT(0.005)S(0.028)LT(0.966)PLGR 92.939 6.2999e-05 3610700.0 2529.6 2392.0 2449.4 2561.9 3141.2 3799.2 2682.4 3211.2 3068.4 2831.4 3402.9 True False 2786.4031298069035 2593.5822347247295 2615.631013438741 2720.1427445029512 2920.5729485517054 3768.2605748207448 2784.4801998656017 3147.1500968623345 2939.445818648428 2652.6249207902515 2984.3648727604013 0.9336670442812202 0.8690566821763266 0.8764447796959228 0.9114645361667668 0.9786246230174626 1.2626675140212582 0.9330227095489448 1.0545460193516365 0.9849485381221414 0.8888406860038848 1.0 11.54320821701846 -6.791955989232362 4.284979941433934 1.013471204005232 0.8926808018781553 0.28422991954377175 0.09040120985841972 0.189909461360521 7.772214355486467 0.01166687651273296 0.023425791298770423 1.614522161851232e-07 6.791955989232362 -0.1207904021270767 AVLGEVK ddPTM_A549_MK2206_60min_R1 1 AVLGEVK 7 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 83.801 0.039735 778090.0 1000.3 1501.1 1139.3 1227.4 1499.6 1320.6 1080.7 1408.7 1740.7 1777.3 1739.0 False True 1169.12618501302 1577.499578283504 1300.8698715257085 1528.1130551000795 1279.0108265081074 1460.3450154566663 1277.0492011926185 1608.3875389628163 1346.4342293267057 1375.8066956115422 1307.1583060416178 0.8944029040777841 1.2068160153153469 0.9951892326378186 1.1690344222556825 0.9784666635988815 1.1171906330756018 0.9769659843724845 1.2304458698911467 1.0300467993077476 1.0525172729673484 1.0 10.352218156867332 -8.982758175570035 24.970344487223855 1.0132558510210252 1.0753028198985093 0.0317319655316346 0.10082063566822888 194.34468551954006 281462.5939603089 0.015601815523563352 0.015791171768014745 1.0404993767998963e-09 8.982758175570035 0.062046968877484066 AVLGEVK ddPTM_A549_PD325901_60min_R1 2 AVLGEVK 7 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 119.89 0.018556 16380300.0 7433.8 7756.6 8367.4 7841.299999999999 8353.9 7836.9 8238.1 9097.1 9860.8 7955.4 8450.8 False True 8188.47390352568 8410.275903790065 8935.262081263701 8325.639292115615 7767.150883390461 7773.078884715909 8551.6054035613 8915.65120396311 9446.384867855697 7453.094686322943 7411.4051740349605 1.1048476923395167 1.1347748107544489 1.2056097152220748 1.123355031416117 1.0479997653618798 1.048799613863783 1.1538440016099651 1.2029636748505006 1.2745740714527474 1.0056250483287619 1.0 12.855531382580704 AVLS(ph)PGSVFSPGR ddPTM_A549_MK2206_60min_R1 2 AVLSPGSVFSPGR 13 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 AVLS(0.907)PGS(0.09)VFS(0.002)PGR;AVLS(0.728)PGS(0.159)VFS(0.112)PGR 94.191 0.00017332 3693100.0 1333.02 1885.69 1476.13 1361.56 2044.96 1474.1 1452.16 1271.81 1951.99 2297.19 1893.6799999999998 True False 1558.0011867900196 1981.663566566799 1685.4674304004595 1695.1422611227513 1744.149092942132 1630.0882835716122 1715.9986749364969 1452.092962254774 1509.8673816875023 1778.253183532256 1423.426993090794 1.0945423926569038 1.3921778750758858 1.1840912379641455 1.1908880956668957 1.225316859528517 1.1451857323796277 1.2055403496391621 1.0201386999847006 1.0607269561532016 1.2492760023266112 1.0 10.475152784481363 -8.113316995962956 0.7314980388629345 1.017248464419298 1.2334614139975293 0.12754395303681698 0.10125536856024964 0.28694986575554265 0.31118426761592327 0.015093397008226326 0.02254223826685139 7.703409840821856e-09 8.113316995962956 0.21621294957823123 AVLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 AVLSPR 6 0 A8CG34;Q96HA1 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 1 AVLS(1)PR;AVLS(1)PR 89.55 0.037946 29491000.0 5300.4 5934.799999999999 5479.6 4570.1 6586.3 5290.5 5745.7 5250.1 8473.9 7892.6 8457.5 True False 6194.977937661714 6236.8559704196505 6256.689676127683 5689.774705159583 5617.463994818854 5850.337198450324 6789.619316454543 5994.31775275693 6554.575180037671 6109.656178351237 6357.269334874632 0.9744715240673191 0.9810589487227764 0.9841787954153225 0.895002933719779 0.8836284415389856 0.9202594526484216 1.0680087564023961 0.9429076285746418 1.0310362570421017 0.9610503907448059 1.0 12.634191496242096 -7.742025534009019 24.998567168147428 1.0121434009677666 0.939075872684162 0.3052389420655697 0.04415884934803957 185.93529545648332 239422.24144175914 0.006531247149828386 0.009679359277534322 1.811233599406872e-08 7.742025534009019 -0.07306752828360452 AVLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AVLSPR 6 0 A8CG34;Q96HA1 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 1 AVLS(1)PR;AVLS(1)PR 89.55 0.037946 36430000.0 11099.3 12381.7 11086.0 10498.5 13342.0 12966.5 11749.7 12557.9 12633.0 12692.3 14087.3 True False 12226.092765127192 13425.149312579933 11838.362625533558 11146.968501176569 12404.903947401277 12860.90512302937 12196.841263182545 12307.42283301803 12102.078942440883 11890.906011918536 12354.651406752344 0.9895943125068758 1.0866473581960003 0.9582109794747741 0.9022487267495282 1.0040674996804417 1.0409767705789204 0.9872266615726973 0.9961772637544025 0.9795564879982434 0.9624639029005423 1.0 13.592766684360654 -5.775509561949846 24.99965247647865 0.987157291455886 1.0381208633038366 0.22813561558013473 0.03914232396100384 230.447703737712 409457.77695614024 0.0051798445758854065 0.01621695927414752 1.6768354161161114e-06 5.775509561949846 0.05096357184795053 AVLSAEQLRDEEVHAGLGELLR ddPTM_A549_MK2206_60min_R1 1 AVLSAEQLRDEEVHAGLGELLR 22 1 E9PQ34;E9PJH8;E9PIG2;E9PRS3;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6;P50454 E9PQ34 SERPINH1 Serpin H1 0 62.663000000000004 0.0045809 1427200.0 139.02 197.02 172.84 112.53 204.52 102.55 132.32 216.93 171.26 176.24 239.21 False True 162.48317728732388 207.04747645954038 197.35131097560193 140.09985505166367 174.43537892600574 113.4017729328193 156.36083122217747 247.6804918202626 132.46988344602266 136.42726159600414 179.8075551398594 0.9036504453939095 1.1514948651545425 1.0975696256038658 0.7791655636643857 0.9701226335585563 0.6306841380753562 0.8696010081476031 1.3774754438299865 0.7367314646093922 0.7587404293990159 1.0 7.490309830948623 -6.24380325781519 24.306728315257754 0.8926820683870702 1.060963985645989 0.11972410479029916 0.19333080022360882 946.0583029149111 1303887.1545499493 0.026827208942152847 0.07078808119911256 5.704226241174339e-07 6.24380325781519 0.16828191725891872 AVLSAEQLRDEEVHAGLGELLR ddPTM_A549_PD325901_60min_R1 2 AVLSAEQLRDEEVHAGLGELLR 22 1 E9PQ34;E9PJH8;E9PIG2;E9PRS3;E9PNX1;E9PK86;E9PMI5;E9PR70;E9PPV6;P50454 E9PQ34 SERPINH1 Serpin H1 0 ; 97.488 1.7797e-06 4610100.0 392.61 344.51 328.75 463.31 509.66 363.45 608.01 520.11 615.06 483.99 554.47 False True 432.467478175794 373.5430667579503 351.06095193434544 491.9276064466461 473.86323983154966 360.4901837014634 631.1481532658383 509.7359980315983 589.2111671287653 453.4307888017498 486.2737050749241 0.8893499147957429 0.76817451336464 0.7219410555630489 1.0116269938364255 0.9744784364980987 0.7413318465285302 1.2979277856872649 1.0482491500400153 1.2116862601854665 0.9324600200866013 1.0 8.92562477069195 -7.751205120434742 24.999240574470107 1.1112984748588244 0.8544058767425926 0.49102130299532254 0.12481973829547222 131.73067580662996 321777.7481351623 0.01900701547308142 0.028015287934927365 1.7733517161828037e-08 7.751205120434742 -0.2568925981162318 AVLSDS(ph)PQLSEGK ddPTM_A549_MK2206_60min_R1 2 AVLSDSPQLSEGK 13 0 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9;Q7Z4H7-2 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 AVLS(0.001)DS(0.999)PQLSEGK;AVLS(0.005)DS(0.995)PQLSEGK 280.5 2.3025999999999995e-98 50427000.0 17778.0 18769.8 18382.300000000003 17139.0 23276.0 18877.800000000003 19368.9 17522.9 27121.0 26628.0 26234.0 True False 20778.49176963057 19725.102647702173 20989.18655257354 21338.055769398943 19852.13123353075 20875.436265930533 22887.978414897458 20006.824736630606 20978.136803337507 20612.716306050825 19719.373778433463 1.0537095144651822 1.0002905198376522 1.0643941733854063 1.0820858719527793 1.006732336259201 1.0586257200906362 1.1606848509524887 1.014577083503104 1.0638338234797657 1.045302783833551 1.0 14.267326116808194 -10.72242766707826 0.8707020398689878 0.9983585382153106 1.0563626520558185 0.04562384409279996 0.043577256791739585 0.8447153339905747 1.0846188681732207 0.03238704461899971 0.007476578400535472 1.894839078655322e-11 10.72242766707826 0.058004113840507854 AVLSDS(ph)PQLSEGK ddPTM_A549_PD325901_60min_R1 3 AVLSDSPQLSEGK 13 0 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9;Q7Z4H7-2 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 AVLS(0.002)DS(0.986)PQLS(0.012)EGK;AVLSDS(1)PQLSEGK;AVLSDS(1)PQLSEGK 279.24 2.6696999999999997e-98 84957000.0 25734.0 26646.2 27102.9 25832.7 31341.199999999997 28491.9 28772.5 28537.5 26340.2 28656.5 31089.1 True False 28346.496735630473 28891.768788847032 28942.265776977583 27428.327208681614 29139.90223327032 28259.87141285933 29867.453232416145 27968.29717526435 25233.21299451291 26847.12369945111 27265.337790042413 1.0396532386253037 1.059651965852358 1.0615040238946756 1.0059778983812453 1.0687526579594593 1.036476115956287 1.09543675792361 1.025782163075884 0.9254685633760364 0.9846613273669383 1.0 14.73478040865418 -8.585337606939971 6.391537373246224 0.9650159496678591 1.0519891722236383 0.6387759203013941 0.02700234855710994 0.10058557753305483 7.880280262814455 0.005452485109688285 0.006193612043839567 2.5981390659243745e-09 8.585337606939971 0.08697322255577922 AVLSPGS(ph)VFSPGR ddPTM_A549_MK2206_60min_R1 1 AVLSPGSVFSPGR 13 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 AVLS(0.013)PGS(0.633)VFS(0.354)PGR 44.61600000000001 0.058208 598610.0 829.24 802.95 650.13 743.84 1361.6 994.5 693.15 936.05 1574.8 1384.7 1609.1 True False 969.1954390284876 843.8167253232566 742.3282099315446 926.0808333922471 1161.3104437006127 1099.7373299043277 819.0863827210719 1068.7379540328984 1218.1103144388442 1071.895308284084 1209.516061099234 0.8013084490566104 0.6976482185415362 0.6137398533235688 0.7656622869072156 0.9601447066731705 0.9092374754452313 0.6772017413118671 0.8836079060096205 1.0071055305638517 0.8862183337275592 1.0 10.240214211577586 -7.786749998043639 0.44862684093962546 1.0190942523355533 0.6987210653889937 0.3524350371128502 0.10340800157892331 0.598386802138249 0.25555293424675013 0.03378644313156415 0.07191154586371859 1.6339922861458052e-08 7.786749998043639 -0.3203731869465596 AVLSPGSVFS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 AVLSPGSVFSPGR 13 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 AVLS(0.001)PGS(0.029)VFS(0.97)PGR 64.65 0.005863800000000001 499120.0 777.41 739.96 976.66 746.71 1362.0 1030.6 547.1 1028.8 1213.6 1253.8 1501.5 True False 908.6178021503266 777.6208033752993 1115.1650739263562 929.6539835210863 1161.6516042304906 1139.6574079430866 646.5009882228939 1174.6355505678616 938.7215377209687 970.5657091980822 1128.636110708159 0.8050582411192012 0.6889916032257586 0.9880643223675073 0.8236968272597426 1.0292525582063967 1.0097651467380502 0.5728161469308729 1.040756661445858 0.8317309084962476 0.8599456458903338 1.0 10.140364699117894 -14.999944194844392 0.3032755670327502 2.223234095911651 0.8560762591986736 0.0 0.1468944789477544 75.10834949380435 0.9935334964794127 56.32011413042816 0.048349223799393944 1.0001285043753943e-15 14.999944194844392 -1.3671578367129777 AVLTS(ph)QK ddPTM_A549_MK2206_60min_R1 2 AVLTSQK 7 0 P38398;P38398-4;P38398-8;P38398-5;H0Y8B8;B7ZA85;E7EUM2;H0Y881 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 AVLT(0.156)S(0.844)QK;AVLT(0.018)S(0.982)QK 123.72 0.0062193000000000005 7816300.0 4568.799999999999 5272.4 5144.0 4538.4 6725.5 4742.3 4632.8 4590.1 7410.8 6568.799999999999 7559.8 True False 5339.901743564417 5540.742639758805 5873.496549748303 5650.30820373652 5736.187859215975 5244.12703831603 5474.519792065475 5240.760731591697 5732.265632615819 5084.903517770264 5682.493020134227 0.9397110959299133 0.9750548958224549 1.0336126289882472 0.9943361450188026 1.0094491693859537 0.9228567496229249 0.9634010587726441 0.9222643499996599 1.0087589394839973 0.8948367379869044 1.0 12.472308291628849 AVLTSQKS(ph)SEYPISQNPEGLSADKFEVSADSSTSK ddPTM_A549_PD325901_60min_R1 2 AVLTSQKSSEYPISQNPEGLSADKFEVSADSSTSK 35 2 P38398;P38398-4;P38398-8;P38398-5;H0Y8B8;B7ZA85;E7EUM2;H0Y881 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 AVLT(0.012)S(0.049)QKS(0.747)S(0.19)EY(0.001)PISQNPEGLSADKFEVSADSSTSK;AVLT(0.116)S(0.105)QKS(0.651)S(0.127)EYPISQNPEGLSADKFEVSADSSTSK 103.57 1.2602e-14 8589000.0 2047.17 2299.37 1771.96 2262.0 2853.2 2263.55 2827.9 3296.9 2347.4 2592.9 2077.65 True False 2254.9971913531 2493.1459795397172 1892.2158612610901 2401.718602625267 2652.801075005645 2245.1163992776105 2935.517281986255 3231.1407431319863 2248.7469413033905 2429.1838514929177 1822.1122213084845 1.2375731664506122 1.3682724644420385 1.0384738322551084 1.318095874962388 1.4558933549661564 1.2321504532060932 1.6110518592966896 1.7732940404799318 1.2341429441094103 1.3331691775539964 1.0 10.83139610008059 -9.56900167056548 1.4872290350849378 1.058215302844792 1.3686766547293425 0.07969262110245712 0.20739050889734928 0.3150939626600974 1.4161262144372655 0.04913671751968934 0.0380300487103108 2.697729055288656e-10 9.56900167056548 0.3104613518845505 AVLVDLEPGTMDSVR ddPTM_A549_MK2206_60min_R1 3 AVLVDLEPGTMDSVR 15 0 P68371;P04350;Q3ZCM7;M0R0X0;M0QY85;M0QY37;M0QX14;A0A075B724;M0QZL7;M0R278 P68371 TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain 0 ;; 113.47 3.5248e-06 5641900.0 3447.4199999999996 4543.51 3838.64 3252.2799999999997 5214.86 4323.96 3709.05 4098.860000000001 6063.1 4908.620000000001 5358.129999999999 False True 4029.2602146731806 4774.755252099716 4383.016873197091 4049.088746000399 4447.761002083268 4781.518577187646 4382.93637427915 4679.8859572322945 4689.817530781153 3799.7593328153544 4027.5584441350034 1.0004225315564708 1.1855210342267766 1.0882565539377118 1.0053457453601322 1.1043318337341996 1.1872002960380554 1.0882365669110659 1.1619659955641912 1.164431899830167 0.9434398992641873 1.0 11.975689808777537 -3.807040549833026 16.577677258876367 1.0918301814859146 0.40853798445087774 0.0 0.08231471038070907 0.0 0.0 0.010315984155214336 0.0 0.0001559406895079241 3.807040549833026 -0.6832921970350369 AVLVDLEPGTMDSVR ddPTM_A549_PD325901_60min_R1 2 AVLVDLEPGTMDSVR 15 0 P68371;P04350;Q3ZCM7;M0R0X0;M0QY85;M0QY37;M0QX14;A0A075B724;M0QZL7;M0R278 P68371 TUBB4B;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain 0 ; 107.18 2.6166e-06 11269600.0 7265.200000000001 7529.2 7475.8 7771.299999999999 9426.900000000001 8889.2 8433.8 8397.8 8396.599999999999 8902.1 10868.7 False True 8002.757755642441 8163.712107729698 7983.152743637356 8251.31555109715 8764.7870650395 8816.809302404865 8754.752874152446 8230.299291053347 8043.720101963041 8340.019886758113 9531.91880236591 0.8395746881159 0.8564605172364026 0.8375179131462874 0.8656510532852103 0.9195196944883751 0.9249773823310845 0.9184670007868128 0.8634462233365344 0.8438720753649849 0.8749570846835207 1.0 13.218550946647365 -10.840439858146866 0.9749687861339259 1.0035463183055198 0.8742686854993869 0.0 0.047698099283444345 0.30117574374929873 0.48502369333484896 0.028224530660075606 0.006200286169521696 1.4439765548235468e-11 10.840439858146866 -0.1292776328061329 AVLY(ph)ADYR ddPTM_A549_MK2206_60min_R1 3 AVLYADYR 8 0 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 AVLY(0.91)ADY(0.09)R;AVLY(0.997)ADY(0.003)R;AVLY(0.998)ADY(0.002)R 54.765 0.023548 4272500.0 1752.03 1630.62 1510.31 1349.6 1929.1100000000001 1433.69 1337.6999999999998 1501.73 2263.3999999999996 2154.3 2179.8 True False 2047.7298309790683 1713.611593058856 1724.4946683612673 1680.2520605858458 1645.3404744765646 1585.4021241936 1580.742774530734 1714.6048263552432 1750.7435139070874 1667.6421337736708 1638.4955005805182 1.2497622546131855 1.0458445521832218 1.0524866670370956 1.025484696168243 1.0041775970050704 0.9675962635429226 0.9647525879507619 1.046450738343657 1.0685067571359212 1.0177886562293432 1.0 10.678155995810025 -5.057239433016624 1.9433164465359154 1.0232681125267944 1.4276897027278985 0.813734097376718 0.03175107980723447 0.6066373051682952 1.47932317190179 0.005407393530955949 0.5270864986102733 8.765174507850251e-06 5.057239433016624 0.40442159020110413 AVLY(ph)ADYR ddPTM_A549_PD325901_60min_R1 2 AVLYADYR 8 0 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 AVLY(1)ADYR;AVLY(0.994)ADY(0.006)R 94.40700000000001 0.0011480000000000001 4217400.0 1086.6 1143.5 936.9 1208.0 1265.6 1221.9 893.95 1379.4 1408.7 1721.0 1292.3 True False 1196.9108320873588 1239.8667581135983 1000.4836680373793 1282.615416432946 1176.7086220829751 1211.9492515196541 927.96975643821 1351.8867848816342 1349.4972378862083 1612.3357662923036 1133.3552925646552 1.0560773306832005 1.0939788839807856 0.8827626028669241 1.1316975575510235 1.0382521966436635 1.069346267203773 0.8187809793858368 1.1928181689807675 1.1907097860128648 1.4226216411305317 1.0 10.146384483392628 AVNRVS(ph)AIR ddPTM_A549_MK2206_60min_R1 2 AVNRVSAIR 9 1 Q9BTT6 Q9BTT6 LRRC1 Leucine-rich repeat-containing protein 1 1 AVNRVS(1)AIR;AVNRVS(1)AIR 76.332 0.00055802 19623500.0 2595.2 2792.3 2442.8 1995.19 2969.0 2635.7 2084.8999999999996 2458.6 3740.4 3704.7 3438.5 True False 3033.2063134517552 2934.416143122396 2789.2257721083106 2484.0116395674822 2532.2640330105187 2914.608024563937 2463.699342617275 2807.114079146719 2893.205372191424 2867.8056969741056 2584.6255522277784 1.1735573498595684 1.1353351128921252 1.0791604879492815 0.9610721512160345 0.9797411585704833 1.1276712876461874 0.9532132577168584 1.0860815318981778 1.1193905321015147 1.1095633154683642 1.0 11.335739569815864 -2.0001067503897567 0.006523644109114758 6.384200184513345e-07 2.230975403611087 0.028044230914699098 0.07343497407701088 55140.77796534416 27.070880124928166 4190.179667200707 5110.859078791858 0.009997542283506761 2.0001067503897567 2.2309747651910685 AVNRVS(ph)AIR ddPTM_A549_PD325901_60min_R1 1 AVNRVSAIR 9 1 Q9BTT6 Q9BTT6 LRRC1 Leucine-rich repeat-containing protein 1 1 AVNRVS(1)AIR 61.419 0.0021308000000000004 15634000.0 11697.0 2134.4 1648.0 2468.6 1866.0 3169.7 2326.8 2168.3 2266.1 2408.0 3141.9 True False 12884.47082912371 2314.2733786774525 1759.8431902290545 2621.0798154026243 1734.9385973505307 3143.8870141106863 2415.347647273816 2125.0515555015577 2170.863697575025 2255.9584690481483 2755.4662181450817 4.675967625470381 0.8398845042765103 0.6386734769747029 0.9512291597488997 0.6296352268540794 1.1409637299879802 0.8765658716366969 0.771213067867729 0.7878389810332721 0.8187211493257969 1.0 11.428080724583978 -5.261156690562813 24.999521926299323 0.8708417997219821 4.675968759446582 0.9831344200893991 0.14419546941370653 1.9169153649546216 169436.7191917333 0.01965319086264663 0.158634984822315 5.480791859164997e-06 5.261156690562813 3.8051269597246002 AVNTQALS(ph)GAGILR ddPTM_A549_PD325901_60min_R1 2 AVNTQALSGAGILR 14 0 O60749;O60749-2 O60749 SNX2 Sorting nexin-2 1 AVNTQALS(1)GAGILR;AVNTQALS(1)GAGILR 156.17 5.885100000000001e-19 12027800.0 5444.0 5203.8 6521.1 6122.4 6414.6 5527.9 5950.4 6253.4 6246.4 5916.2 6727.9 True False 5996.670872339017 5642.342488737691 6963.6610605598835 6500.56674302075 5964.060625168658 5482.882615169405 6176.845728183816 6128.671031302605 5983.885530441124 5542.650122334993 5900.410951672015 1.0163141044675412 0.9562626289849873 1.1801993314697128 1.1017142358836325 1.010787328885729 0.9292374141526034 1.046850088710087 1.0386854545387059 1.014147248293859 0.9393667945729032 1.0 12.526599723423415 -6.8578120301218615 8.871069307994334 1.006535441185354 1.0641831146872733 0.2023572814378467 0.06183482031839061 0.36610153244593874 30.335129048855446 0.008423922544000028 0.01595355585785247 1.3873561697787123e-07 6.8578120301218615 0.05764767350191935 AVNYFSK ddPTM_A549_PD325901_60min_R1 2 AVNYFSK 7 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 83.265 0.040408 6285900.0 9654.599999999999 9303.7 9560.9 10702.2 10432.5 11973.7 10198.5 10406.5 12058.7 10125.0 11795.4 False True 10634.727884659129 10087.755450337989 10209.760168362234 11363.250587540299 9699.757190171167 11876.190157067582 10586.60949833333 10198.934193758681 11551.914774258845 9485.705772056686 10344.64057720121 1.0280422799896256 0.9751673221562308 0.9869613247717623 1.0984674143811266 0.9376601456360586 1.148052469144437 1.0233907518899594 0.9859147949747376 1.116705282126319 0.9169681344910572 1.0 13.336595899421365 -6.226903558540237 24.502495688198266 1.0495744683892694 0.9945679893300575 0.0 0.0710024233266562 779.4801277901867 553024.8925554777 0.008520277813869588 0.022540676674131906 5.930570069655736e-07 6.226903558540237 -0.055006479059211855 AVPAPSPGPTHNS(ph)PELGRPPAAGVLAPDMSDKDK ddPTM_A549_MK2206_60min_R1 1 AVPAPSPGPTHNSPELGRPPAAGVLAPDMSDKDK 34 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 AVPAPS(0.018)PGPT(0.062)HNS(0.916)PELGRPPAAGVLAPDMS(0.004)DKDK 45.527 0.0038400999999999995 4588100.0 1444.5 1620.0 1510.0 1572.7 1580.1 1701.3 1592.1 1380.6 2379.0 2200.4 2271.4 True False 1688.2962853656968 1702.4510804205436 1724.1407056998332 1958.0115706011857 1347.6693831458126 1881.3304367684586 1881.3639615237958 1576.3042779101763 1840.1602984823546 1703.3281117558297 1707.348692549126 0.988840939600344 0.9971314517356907 1.0098351398422523 1.1468141095875453 0.7893345917134825 1.1019017058311458 1.1019213413956228 0.9232468357454878 1.077788214272116 0.9976451320044686 1.0 10.737542015340654 AVPAPSPGPTHNS(ph)PELGRPPAAGVLAPDMSDKDK ddPTM_A549_PD325901_60min_R1 1 AVPAPSPGPTHNSPELGRPPAAGVLAPDMSDKDK 34 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 AVPAPSPGPT(0.001)HNS(0.998)PELGRPPAAGVLAPDMSDKDK 84.516 8.0476e-07 20325000.0 3206.4 2782.2 2517.7 2991.4 2736.9 2566.7 2311.6 2704.2 3118.2 3242.0 3713.6 True False 3531.9113675730773 3016.6657581317486 2688.566262160006 3176.171984037677 2544.669585792427 2545.7976461866724 2399.5692029560555 2650.2626095961386 2987.1528978325928 3037.2995667168166 3256.8507424499753 1.0844560119191053 0.9262523820365355 0.8255110457218939 0.9752279840888233 0.781328279071884 0.781674644467001 0.736775920271671 0.8137500976180662 0.9171906034556249 0.9325878914647465 1.0 11.669261888933395 -9.463370889646882 1.3622006813692482 0.9789471671387788 0.8623216987744678 0.12450184916830143 0.0969180206862641 0.43852177797735975 1.673981279793675 0.02418024041685589 0.019274676473532096 3.4405597974602017e-10 9.463370889646882 -0.11662546836431098 AVPEGFVIPR ddPTM_A549_PD325901_60min_R1 2 AVPEGFVIPR 10 0 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 ; 90.65700000000001 0.0018207999999999998 6260100.0 2317.8 2358.5 2487.2 2546.3 2532.5 2788.4 2852.6 1991.3400000000001 2823.4 2581.75 2979.8 False True 2553.101349725823 2557.2590721564707 2655.9963487486066 2703.579167933121 2354.6259366507065 2765.692194891073 2961.1572540026136 1951.621161523991 2704.7423166379785 2418.737864395789 2613.3034905085174 0.9769632034697281 0.9785541868536894 1.0163367394545444 1.0345446588015834 0.9010151117934353 1.0583126701265388 1.1331088274888457 0.7468023398783389 1.03498974629681 0.9255480173583405 1.0 11.351658963405956 AVPETEDVQASVSDTAQQPS(ph)EEQSKSLEKPK ddPTM_A549_MK2206_60min_R1 1 AVPETEDVQASVSDTAQQPSEEQSKSLEKPK 31 2 H0YME2;H0YK21;H0YK54;Q6FIF0-2;Q6FIF0 H0YME2 ZFAND6 AN1-type zinc finger protein 6 1 AVPETEDVQASVSDT(0.001)AQQPS(0.333)EEQS(0.333)KS(0.333)LEKPK 104.28 6.0073000000000004e-15 6862400.0 1226.5 1352.7 1388.4 1548.4 1970.8 1589.8 1421.4 1478.5 2380.9 2105.9 2038.2 True False 1433.503214953982 1421.546652151153 1585.2959972143358 1927.7580695103186 1680.8979307029733 1758.0315807761685 1679.6499811003855 1688.0819027163523 1841.6299515160301 1630.1757273889311 1532.0586885417054 0.9356712152577303 0.9278669693158141 1.0347488703081633 1.2582795188774791 1.0971498306653913 1.1474962375296185 1.0963352733563787 1.1018389278044942 1.2020622743042508 1.0640426111486752 1.0 10.58125584827374 -5.931545976376985 4.445577602450289 1.1114944414555545 0.935073572574331 0.553937014240865 0.06523213932832161 0.15005943917237388 5.794565436230876 0.0114398168529367 0.0377549259868485 1.1707226577671507e-06 5.931545976376985 -0.17642086888122355 AVPIAVADEGES(ph)ESEDDDLKPR ddPTM_A549_MK2206_60min_R1 1 AVPIAVADEGESESEDDDLKPR 22 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 AVPIAVADEGES(0.996)ES(0.004)EDDDLKPR 153.24 1.6452e-28 8334700.0 1384.9 2052.8 1780.9 1491.9 2255.1 1762.3 1901.7 2033.4 2947.2 2392.0 2621.5 True False 1618.6372624457972 2157.2787517822776 2033.4583991926045 1857.4155669739353 1923.3777773129068 1948.7854162799367 2247.2142739964856 2321.640677026331 2279.663905711304 1851.6455386838506 1970.5092002806805 0.8214309591730085 1.0947823798412073 1.0319456508515452 0.9426068991250404 0.9760816021761988 0.9889755480473528 1.1404231320901173 1.1781932693821655 1.1568907698510553 0.9396787076254712 1.0 10.944352770077101 -7.702582844456471 9.174689078776943 1.0899265816690547 0.9821651676306139 0.25900163202693904 0.08950596179381633 0.3587276056359078 52.396139067125155 0.013558172197384831 0.020101774313314176 1.9834312685183858e-08 7.702582844456471 -0.10776141403844075 AVPIAVADEGES(ph)ESEDDDLKPR ddPTM_A549_PD325901_60min_R1 2 AVPIAVADEGESESEDDDLKPR 22 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 AVPIAVADEGES(0.997)ES(0.003)EDDDLKPR;AVPIAVADEGES(0.998)ES(0.002)EDDDLKPR 243.87 8.790499999999997e-99 32895000.0 6018.6 6319.299999999999 5903.9 7036.6 6493.1 6804.3 6705.0 7353.2 6745.9 6881.4 7402.5 True False 6629.60384134086 6851.849588585274 6304.574157034778 7471.234800721911 6037.047055978954 6748.888036758474 6960.162444116781 7206.534657526195 6462.393282499165 6446.907229612925 6492.039428313752 1.0211897069551283 1.0554232863562536 0.9711238242852652 1.1508301641141596 0.9299153405707244 1.0395636242325528 1.0721072354800254 1.1100571302904156 0.995433461835538 0.9930480707643284 1.0 12.664456046541192 AVPIGT(ph)PPK ddPTM_A549_MK2206_60min_R1 2 AVPIGTPPK 9 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 AVPIGT(1)PPK;AVPIGT(1)PPK 123.63 0.00010372 154879000.0 10448.8 15287.9 14957.7 15289.8 23249.0 20299.3 19796.5 21435.0 29871.0 29962.0 30907.0 True False 12212.301991366636 16065.988810099525 17078.926777249264 19035.801686385206 19829.10289776406 22447.358452415203 23393.267799953413 24473.476891934406 23105.266194185122 23193.563390487263 23231.938910194527 0.5256686511863929 0.6915474800533986 0.735148574695794 0.8193806707210308 0.8535276790463128 0.9662283694524076 1.006944271435222 1.0534409971780303 0.9945474755034838 0.998348156826014 1.0 14.503821944345816 -5.94615840822317 0.5966936778635435 1.0067316403193356 0.4438398654141111 0.9601192558075261 0.03194483442479158 0.2582951409415614 0.09808932750470432 0.006135343787124037 0.08513353810934288 1.1319873973187792e-06 5.94615840822317 -0.5628917749052245 down AVPIGT(ph)PPK ddPTM_A549_PD325901_60min_R1 4 AVPIGTPPK 9 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK 116.77 0.00019871 308549000.0 25433.0 25023.4 24837.3 24455.499999999996 29740.6 25279.5 24210.800000000003 25124.8 25654.9 30651.4 30694.1 True False 28014.93943721496 27132.209737629953 26522.908536818006 25966.06069252972 27651.7228555001 25073.6321333915 25132.15524265812 24623.666153975708 24576.713770317947 28716.06537299936 26918.92028593111 1.040715568813385 1.007923402923791 0.9852887209105456 0.9646026072635836 1.0272225840332823 0.9314501423928199 0.9336241935302722 0.914734539588685 0.9129903246217014 1.0667614104867167 1.0 14.716332924364995 -7.265698479862338 24.967660908702523 0.9504502333150403 1.0019485213078547 0.17722224495975325 0.04588134196173002 357.84746814973397 2097772.5880320217 0.005930799250286465 0.009701521371065605 5.4237731914699335e-08 7.265698479862338 0.05149828799281442 AVPMAPAPAS(ph)PGSSNDSSAR ddPTM_A549_MK2206_60min_R1 7 AVPMAPAPASPGSSNDSSAR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AVPMAPAPAS(0.972)PGS(0.02)S(0.008)NDSSAR;AVPMAPAPAS(0.434)PGS(0.434)S(0.131)NDS(0.001)SAR;AVPMAPAPAS(0.997)PGS(0.002)SNDSSAR;AVPMAPAPAS(0.882)PGS(0.105)S(0.013)NDSSAR;AVPMAPAPAS(0.989)PGS(0.005)S(0.005)NDS(0.001)S(0.001)AR;AVPMAPAPAS(0.837)PGS(0.162)S(0.001)NDSSAR;AVPMAPAPAS(0.969)PGS(0.025)S(0.006)NDSSAR 270.32 2.2183999999999994e-111 177142000.0 12948.399999999998 14266.470000000001 15465.3 12809.660000000002 19064.600000000002 14667.7 14192.62 13707.079999999998 21628.8 20261.2 20889.5 True False 15133.773362013984 14992.5723859798 17658.51208997326 15948.027275047496 16260.222594722909 16219.82627836873 16771.23534175106 15650.100566171957 16729.911334096323 15684.180847985475 15702.060629129608 0.9638081089776607 0.954815596506257 1.1245983891575448 1.0156646093609896 1.0355470519937893 1.0329743758776853 1.0680913631576467 0.9966908761732038 1.0654596061780517 0.9988613098900558 1.0 13.938666280344643 AVPMAPAPAS(ph)PGSSNDSSAR ddPTM_A549_PD325901_60min_R1 2 AVPMAPAPASPGSSNDSSAR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AVPMAPAPAS(0.77)PGS(0.206)S(0.024)NDSSAR;AVPMAPAPAS(0.912)PGS(0.068)S(0.019)NDSS(0.001)AR 204.71 2.8611999999999995e-55 88497000.0 5157.200000000001 5728.7 5018.7 5323.5 6652.8 6126.0 5457.1 6305.799999999999 5843.799999999999 6624.7 7382.4 True False 5680.75514747002 6211.477653874399 5359.299161894754 5652.320504454297 6185.530278914048 6076.111887068827 5664.772926739702 6180.025872195594 5598.205408361909 6206.415311421627 6474.411600889354 0.8774164352926969 0.9593887501717009 0.8277662113972761 0.8730245855357527 0.9553810693877379 0.938480940296441 0.8749479143342637 0.9545308907062192 0.8646662821982022 0.9586068501682973 1.0 12.660533370271896 -10.936525627308749 1.1190194706306542 1.0016222384462141 0.9012136352912054 0.3022271936033182 0.04342675297834488 0.39380235311436174 0.8524334042775242 0.031585144412836864 0.006927198323056628 1.157375734424055e-11 10.936525627308749 -0.10040860315500877 AVPPGNDPVS(ph)PAMVR ddPTM_A549_MK2206_60min_R1 2 AVPPGNDPVSPAMVR 15 0 A0A0A0MR08;O94966-2;O94966-7;O94966-6;O94966-5;H0YB23;E7ESU0;O94966-4;O94966-3;O94966 A0A0A0MR08 USP19 Ubiquitin carboxyl-terminal hydrolase 19;Ubiquitin carboxyl-terminal hydrolase 1 AVPPGNDPVS(1)PAMVR;AVPPGNDPVS(1)PAMVR 66.285 0.0034181999999999997 4166300.0 2775.4 3441.9 2687.5 2788.8 3706.8 2772.0 2459.6 2489.9 4669.0 4101.1 3411.3 True False 3243.819667984741 3617.07800845646 3068.627911634635 3472.056125193991 3161.5346303682672 3065.331200095321 2906.4774824219144 2842.850949998947 3611.4789548609106 3174.658661662349 2564.180062909587 1.2650514349230078 1.4106177880316817 1.196728714968889 1.354060962963043 1.2329612401637893 1.1954430363275954 1.1334919588774592 1.1086783612119466 1.4084342231266507 1.238079457672738 1.0 11.32428185970199 -11.02820965201547 1.3004154843971154 0.9990506502801462 1.269016415903028 0.04162939096073848 0.11820488298218772 0.32212135082671434 0.9648764644770215 0.0768661724014342 0.017039810697273484 9.37109515964261e-12 11.02820965201547 0.26996576562288177 AVPPVS(ph)PELR ddPTM_A549_MK2206_60min_R1 2 AVPPVSPELR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 AVPPVS(1)PELR;AVPPVS(1)PELR 179.42 2.6679000000000003e-11 209650000.0 19424.9 22265.0 18081.6 17449.8 24201.0 18076.300000000003 17504.0 18516.8 27299.0 25293.0 26633.0 True False 22703.348226791368 23398.193398495918 20645.84277098151 21725.001783351287 20641.06495887084 19989.122067923174 20684.250224554078 21141.6131053217 21115.820087545086 19579.293733248604 20019.29106659369 1.134073536933412 1.1687823170492098 1.031297397210701 1.085203352660371 1.0310587368058557 0.9984930036448264 1.0332159193723902 1.0560620271214716 1.0547736189710124 0.9780213329292508 1.0 14.289103265170963 -5.766417724730823 24.998804340888547 1.031599152074761 1.1514279439480375 0.7162559905092093 0.02951017531952216 41.39145367852349 207852.9265602964 0.003990542204698286 0.012988913401430116 1.7123095358417785e-06 5.766417724730823 0.11982879187327655 AVPPVS(ph)PELR ddPTM_A549_PD325901_60min_R1 2 AVPPVSPELR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 AVPPVS(1)PELR;AVPPVS(1)PELR 179.57 2.389e-11 288380000.0 25262.0 26054.0 25715.0 26352.0 31211.0 28046.0 26604.0 28498.0 28021.0 29858.0 32855.0 True False 27826.579643098525 28249.662016520968 27460.174536856874 27979.70319026573 29018.84703210471 27817.602674621667 27616.429778267393 27929.585033751504 26843.374815652347 27972.760784401842 28814.043285004827 0.9657297786312347 0.980412979084488 0.9530135797063746 0.9710439771854824 1.0071077753675224 0.96541823025227 0.9584364646470602 0.9693046115567681 0.9316073606935255 0.9708030389112104 1.0 14.814484498149872 AVPS(ph)PPPPPIVK ddPTM_A549_MK2206_60min_R1 2 AVPSPPPPPIVK 12 0 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 AVPS(1)PPPPPIVK;AVPS(1)PPPPPIVK 117.79 2.105e-05 202387000.0 22539.0 27013.0 26365.0 23723.0 34081.0 24867.0 24912.0 24308.0 37415.0 34295.0 39054.0 True False 26343.032174356154 28387.84631814823 30103.95344753381 29535.136064965925 29067.730046827706 27498.409434621342 29438.187933848898 27753.73344012788 28940.56223947762 26547.735681088077 29355.813964433197 0.8973701838508973 0.9670263734653131 1.0254852236087557 1.0061085719084468 0.9901864782916758 0.9367278818409791 1.0028060529854665 0.9454254436192312 0.9858545320712726 0.9043433683444336 1.0 14.841358639170796 -7.3983434855306625 0.004216631901207546 1.9548901996069252 2.7988490858317917e-08 0.0 0.04433717557977859 20837.9379457958 32.23257475184973 7383.100848197555 7559.789865112544 3.996285566495295e-08 7.3983434855306625 -1.9548901716184344 AVPS(ph)PPPPPIVK ddPTM_A549_PD325901_60min_R1 4 AVPSPPPPPIVK 12 0 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 AVPS(1)PPPPPIVK;AVPS(1)PPPPPIVK;AVPS(1)PPPPPIVK;AVPS(1)PPPPPIVK 113.77 3.0098000000000002e-05 323172100.0 22654.29 22696.84 23583.27 24078.11 27711.39 24985.920000000002 25722.84 28140.660000000003 27637.1 27191.260000000002 27699.07 True False 24954.136843593147 24609.582361366913 25183.772519923044 25565.36016934462 25765.037565505638 24782.44295157536 26701.736752278157 27579.372460379313 26475.60879760412 25474.39920311053 24292.259988871665 1.0272464091453282 1.0130626945636434 1.0366994479500788 1.0524076467589334 1.0606274417163597 1.0201785656389422 1.0991870153090029 1.1353152186339797 1.0898783731827608 1.0486632044437367 1.0 14.568209094433337 -6.055842274555099 2.8464893451757405 1.0542418729934946 1.020242050176906 0.1549513732849589 0.035878731174460575 0.5680526993024152 9.011353170296411 0.006553202239029235 0.02181328544207414 8.793418149166664e-07 6.055842274555099 -0.03399982281658853 AVPSQKRT(ph) ddPTM_A549_PD325901_60min_R1 1 AVPSQKRT 8 2 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 1 AVPSQKRT(1) 53.47 0.046702999999999995 18327000.0 5889.2 5652.0 5414.9 6938.1 6524.5 6349.6 4937.8 5372.3 6041.4 7225.5 7822.4 True False 6487.0672486000985 6128.313875695728 5782.387676438898 7366.650679431647 6066.24162830307 6297.8909628031715 5125.710681067841 5265.145262012184 5787.5009675344245 6769.280696888455 6860.294390279158 0.945596045818688 0.8933018799279773 0.8428774841838241 1.0738097026666935 0.8842538356515374 0.9180205111499449 0.7471560824460868 0.7674809508864145 0.8436228299087498 0.9867332670854961 1.0 12.74405477159705 -4.467360198469622 16.772282751314492 0.9048470715159802 1.095620548338749 0.0 0.09439940649227423 9355473.262315255 498373.04308784526 0.01341733112732001 0.0 3.409100477608293e-05 4.467360198469622 0.19077347682276868 AVPVES(ph)PVQKV ddPTM_A549_PD325901_60min_R1 1 AVPVESPVQKV 11 1 Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61 Q8TB61-5 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 1 AVPVES(1)PVQKV 76.92699999999999 0.00095402 58485000.0 27935.0 28971.0 30666.0 31110.0 38884.0 32312.0 33327.0 36102.0 37172.0 38740.0 37179.0 True False 30770.94063533992 31412.48784373334 32747.17916963847 33031.59404406369 36152.92198251767 32048.861785009438 34595.27722223415 35381.917288528886 35609.79010911207 36293.949788590246 32606.218697099222 0.9437138639469846 0.9633894728960988 1.0043231162082522 1.0130458349346199 1.1087738298747893 0.9829064229352247 1.0610024285125672 1.0851278897812398 1.0921165204685344 1.113099011134925 1.0 14.992859522774708 -5.9518817908307176 1.4649266036606057 1.0480182836194778 0.9430375622868975 0.4898141969452683 0.04130698767769748 0.3581600440244036 1.3311397853997553 0.006297640584505233 0.03739415827886741 1.1171672844454737e-06 5.9518817908307176 -0.1049807213325803 AVQGTDGGGGS(ph)NSSSR ddPTM_A549_MK2206_60min_R1 1 AVQGTDGGGGSNSSSR 16 0 Q9BXB5-2;Q9BXB5 Q9BXB5-2 OSBPL10 Oxysterol-binding protein-related protein 10 1 AVQGT(0.01)DGGGGS(0.553)NS(0.402)S(0.017)S(0.017)R 55.885 0.011423 2116700.0 445.94 369.25 383.91 187.09 353.35 475.12 355.6 427.55 668.89 618.42 546.57 True False 521.2037698137618 388.04324780573177 438.35421081140566 232.92705839878928 301.3726830799148 525.3968830408686 420.20791703904393 488.1565218169605 517.3874829978402 478.7184924886568 410.8415844354038 1.268624670820561 0.9445082058550561 1.0669665083046813 0.5669510274109367 0.733549607676823 1.2788308266381838 1.0227979176365796 1.188186737444814 1.2593357211122052 1.1652143079589483 1.0 8.682438405078406 -7.265552121494544 24.980287622008014 1.1322598747875672 0.906679212586715 0.2849496029761569 0.1845969627428979 403.4149923513542 2450293.374517221 0.029271349317777053 0.04784390785191239 5.4256013251407214e-08 7.265552121494544 -0.22558066220085216 AVQGTDGGGGS(ph)NSSSR ddPTM_A549_PD325901_60min_R1 1 AVQGTDGGGGSNSSSR 16 0 Q9BXB5-2;Q9BXB5 Q9BXB5-2 OSBPL10 Oxysterol-binding protein-related protein 10 1 AVQGT(0.004)DGGGGS(0.431)NS(0.431)S(0.085)S(0.049)R 55.885 0.011423 1946600.0 376.2 421.09 367.84 387.77 268.51 285.08 472.76 331.33 362.42 499.36 332.6 True False 414.3915470561973 456.5767321154834 392.8038344016111 411.7216722104334 249.6507839092126 282.75840299797267 490.7511405041987 324.72136322664335 347.18874774949956 467.83032437868934 291.6923085251136 1.4206461224551614 1.5652683282054174 1.3466376140932497 1.4114930705311541 0.8558703010426434 0.9693721594089555 1.6824274283596574 1.113232518431956 1.1902567794982084 1.6038486813182833 1.0 8.188303534876182 -2.0000000000000004 0.15023649216847734 0.9928854698945855 2.8288176662670272 0.0 0.27404067548514355 61.58079256444056 0.577017015417678 0.39093305964976965 24.864649025308104 0.00999999999999999 2.0000000000000004 1.8359321963724418 AVQQHQHGYDS(ph)DEEVDSELGTWEHQLR ddPTM_A549_MK2206_60min_R1 3 AVQQHQHGYDSDEEVDSELGTWEHQLR 27 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR 211.87 4.958699999999999e-81 75001600.0 2677.55 2577.9 2295.49 1930.02 3767.85 3167.55 2718.51 2743.3 3729.75 4015.81 4361.849999999999 True False 3129.4549801875546 2709.104098898838 2621.024999024441 2402.874986641889 3213.6042562407138 3502.738038550479 3212.4280780365916 3132.1711760039 2884.967580186869 3108.635731898827 3278.6822640641935 0.9544855915096635 0.8262783279099094 0.7994141511521361 0.7328782703278267 0.9801511697132829 1.0683371417053844 0.9797924346760353 0.9553140328155248 0.8799167921232833 0.9481357086567517 1.0 11.678900382102215 -6.782276393733197 24.996081798800176 0.9575525151588007 0.8260615138322972 0.5232580908866995 0.06542681355217504 175.4920221356342 210519.8893226238 0.010811075637005908 0.020446142321454766 1.6509107910294704e-07 6.782276393733197 -0.1314910013265035 AVQQHQHGYDS(ph)DEEVDSELGTWEHQLR ddPTM_A549_PD325901_60min_R1 3 AVQQHQHGYDSDEEVDSELGTWEHQLR 27 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR 263.15 7.532699999999998e-138 221831000.0 10540.96 11269.84 9237.5 12043.88 11881.68 9957.11 9778.029999999999 10805.74 11753.48 11917.73 12805.17 True False 11611.070499355383 12219.58896830692 9864.412299600057 12787.803113963928 11047.151786370758 9876.022597429303 10150.138282393316 10590.211038760961 11259.522109427695 11165.24249390747 11230.215268660642 1.0339134399104144 1.0880992639924947 0.8783814079795929 1.13869616993451 0.9836990228672867 0.8794152526167163 0.9038240175785927 0.9430105109662773 1.002609641940599 0.994214467559274 1.0 13.455097962145716 AVQTLAGSQPTSDKPSQRPS(ph)ESTNCSPTR ddPTM_A549_MK2206_60min_R1 1 AVQTLAGSQPTSDKPSQRPSESTNCSPTR 29 2 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 AVQTLAGSQPTSDKPS(0.015)QRPS(0.374)ES(0.194)T(0.194)NCS(0.194)PT(0.028)R 147.3 1.9436e-36 16634000.0 542.35 869.58 948.94 573.28 914.19 994.89 948.31 857.62 1276.1 1098.0 1200.0 True False 633.8854208155664 913.8379077235162 1083.5139611038408 713.7336257355166 779.7138620201706 1100.168599445467 1120.6056518765345 979.1902613510973 987.0653875129599 849.9610374058815 902.0068816848432 0.7027500939145195 1.0131163367806841 1.2012258255502037 0.7912729273221795 0.8644211899622722 1.2196898070117612 1.2423471202163938 1.0855685042248067 1.094299176153997 0.9422999476658691 1.0 9.816994630056627 -7.2406797124809765 24.892615618522818 1.0764191129436635 0.9291096789174136 0.2773898502089305 0.14391171738072198 1008.4683675015169 1209240.177295299 0.02113618835715512 0.036583381823527106 5.745400231026941e-08 7.2406797124809765 -0.14730943402624996 AVQTLAGSQPTSDKPSQRPSESTNCS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 AVQTLAGSQPTSDKPSQRPSESTNCSPTR 29 2 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 AVQTLAGSQPTSDKPS(0.003)QRPS(0.131)ES(0.097)T(0.097)NCS(0.672)PT(0.001)R 165.52 4.5035e-47 12028000.0 878.84 825.66 927.99 517.81 912.89 1013.6 911.68 988.48 883.32 1243.7 1173.3 True False 1027.166706424915 867.6825673210029 1059.592936081051 644.6734732453742 778.6050902980704 1120.858479226774 1077.3204550229343 1128.6000670930403 683.2494303721871 962.7473062128369 881.9372285673547 1.1646709914870874 0.9838371022510213 1.2014380408935514 0.7309743282893286 0.8828350420844121 1.2709050518794067 1.2215386992711101 1.279682987105978 0.7747143540839952 1.0916279243328377 1.0 9.784532166127484 -8.776508961019932 24.998876785827562 0.8936151237503774 1.083305861617121 0.07508565550926882 0.17896817720587993 299.6970448267278 497164.52265008114 0.032069570559916535 0.03420557773863617 1.6729811165683874e-09 8.776508961019932 0.1896907378667435 AVQTLAGSQPTSDKPSQRPSESTNCS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 AVQTLAGSQPTSDKPSQRPSESTNCSPTR 29 2 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 AVQTLAGSQPTSDKPS(0.003)QRPS(0.16)ES(0.115)T(0.115)NCS(0.601)PT(0.006)R 189.79 2.1433999999999997e-67 22074000.0 1674.2 1680.7 1805.2 1751.6 2227.0 1723.2 2030.6 1891.3 2199.5 2031.1 1604.2 True False 1844.1635515191008 1822.3384874171636 1927.7117275494477 1859.792353827771 2070.58320273292 1709.1668305251396 2107.8755941869554 1853.5765378038516 2107.062663967287 1902.8559993703047 1406.8935698616576 1.3108053025648847 1.295292356476089 1.370190161391528 1.3219140336327273 1.4717411800641924 1.2148515475077515 1.4982480831113802 1.3174959197419014 1.4976702638384212 1.3525230622508397 1.0 10.458297478879423 -10.895653931101458 1.1039678474471324 0.9964951310545418 1.3744503943302235 0.03875628955618138 0.13304089654163076 0.21312078410350876 0.4541898697676386 0.06279285820568994 0.01444917941703081 1.2715869696049165e-11 10.895653931101458 0.37795526327568174 AVQTRPVLQPQPGS(ph)LNSSIWDGSEVLR ddPTM_A549_MK2206_60min_R1 1 AVQTRPVLQPQPGSLNSSIWDGSEVLR 27 1 Q86TB9;Q86TB9-4 Q86TB9 PATL1 Protein PAT1 homolog 1 1 AVQT(0.001)RPVLQPQPGS(0.69)LNS(0.146)S(0.161)IWDGS(0.002)EVLR 45.187 0.0081569 2863500.0 844.87 759.45 789.27 889.66 965.15 1051.2 937.26 1298.7 1741.9 1556.4 1363.5 True False 987.463400911677 798.1027611267784 901.200354164044 1107.6267399383555 823.1777135264743 1162.4372862699142 1107.548009910052 1482.7947021019454 1347.362431242713 1204.8081590332552 1024.9053193144032 0.9634679246003207 0.7787087705434671 0.8793010799933111 1.0807112804129924 0.8031743986626279 1.1341899240483124 1.080634463533599 1.4467626171496908 1.3146213663365638 1.175531179640277 1.0 10.001274924476009 -7.3753212428390444 5.1485707193134145 1.1721507658700219 0.9036245934776094 0.5396147994538771 0.13333530214756703 0.1854212446293047 7.223343623161949 0.02442210706872852 0.039350493450920516 4.2138469451031635e-08 7.3753212428390444 -0.2685261723924125 AVQTRPVLQPQPGS(ph)LNSSIWDGSEVLR ddPTM_A549_PD325901_60min_R1 2 AVQTRPVLQPQPGSLNSSIWDGSEVLR 27 1 Q86TB9;Q86TB9-4 Q86TB9 PATL1 Protein PAT1 homolog 1 1 AVQT(0.002)RPVLQPQPGS(0.985)LNS(0.006)S(0.007)IWDGSEVLR;AVQT(0.001)RPVLQPQPGS(0.827)LNS(0.079)S(0.094)IWDGSEVLR 62.183 0.00017072 15103700.0 2304.4 2649.8 2974.2 2417.3 2852.1 2992.3 2861.2 2582.6000000000004 2999.6000000000004 3087.5 3477.5 True False 2538.340991590382 2873.107945473908 3176.0470973175065 2566.61113091338 2651.77833521085 2967.931700893904 2970.0845317087173 2531.088016989495 2873.537243389986 2892.554723083955 3049.789545688761 0.832300377964974 0.9420676090700706 1.0413987751408047 0.8415699157148693 0.8694955161609276 0.9731595103306151 0.9738654052071508 0.8299221894072947 0.942208372198033 0.9484440417119681 1.0 11.574493975905876 -9.900979308128255 0.8912819461234198 0.9936455692543815 0.9182093819635544 0.08771005975591162 0.06608484744337503 0.6551218257193246 1.0666682851129197 0.024243397939051947 0.01283673585647567 1.2560898084111778e-10 9.900979308128255 -0.07543618729082713 AVRPEVNTVASSDEVCDGDREKEEPPS(ph)PIEATPPQSLLEK ddPTM_A549_MK2206_60min_R1 1 AVRPEVNTVASSDEVCDGDREKEEPPSPIEATPPQSLLEK 40 3 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 AVRPEVNT(0.004)VAS(0.003)S(0.003)DEVCDGDREKEEPPS(0.989)PIEAT(0.001)PPQSLLEK 67.995 3.3611999999999996e-05 21145000.0 1626.6 1892.5 1659.1 1550.3 2271.6 1896.2 1468.1 1825.2 2388.0 2434.5 2312.2 True False 1901.1303134481448 1988.820166478937 1894.3853276997288 1930.123569595612 1937.450649170325 2096.8546254043094 1734.8347666057953 2083.9276894405707 1847.1218128524013 1884.5447591663194 1738.0169265264124 1.0938502867447497 1.144304256261634 1.0899694351572473 1.1105320898416924 1.1147478598165896 1.206463868907806 0.9981690857712319 1.199026118580728 1.062775502735779 1.0843074830880712 1.0 10.76322641727286 -9.450734424912298 0.9074018848666368 1.0108019147587495 1.1189453219057681 0.15536278977626294 0.05915342576137128 0.32861815946394635 0.5741028603299899 0.014941857607198836 0.010695665578492717 3.542138799287437e-10 9.450734424912298 0.10814340714701864 AVRPEVNTVASSDEVCDGDREKEEPPS(ph)PIEATPPQSLLEK ddPTM_A549_PD325901_60min_R1 1 AVRPEVNTVASSDEVCDGDREKEEPPSPIEATPPQSLLEK 40 3 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 AVRPEVNTVASSDEVCDGDREKEEPPS(1)PIEATPPQSLLEK 128.21 3.3937999999999995e-30 35200000.0 2587.2 2223.0 2967.8 2522.7 2892.6 2805.4 3213.6 2991.5 3221.9 2269.6 3140.8 True False 2849.850639404026 2410.3400116191783 3169.212754831183 2678.521449532609 2689.433754928267 2782.5537525274062 3335.895306549394 2931.832185713651 3086.4947474590576 2126.297068667642 2754.5015111716084 1.0346157472942759 0.8750548880962337 1.1505576388241587 0.9724160392249407 0.9763776654398474 1.01018414447842 1.2110704216424604 1.0643784996388026 1.120527520112428 0.7719353429445883 1.0 11.427575539055084 -7.555038250726871 24.998709117655537 1.0713364123455558 1.0005826379637883 0.0 0.11966273151789342 287.2296243369024 223272.48280494285 0.012539269869330542 0.01859883005703646 2.785875790271831e-08 7.555038250726871 -0.07075377438176744 AVS(ph)DSFGPGEWDDR ddPTM_A549_MK2206_60min_R1 2 AVSDSFGPGEWDDR 14 0 C9JEN3;C9IYT2;F8WDY4;C9IZ27;C9JW19;C9JWV9;B4DUD2;Q969X1 C9JEN3 TMBIM1 Protein lifeguard 3 1 AVS(0.627)DS(0.373)FGPGEWDDR;AVS(0.868)DS(0.132)FGPGEWDDR 228.17 3.8025e-47 20492900.0 7873.6 8141.2 5709.299999999999 5395.8 11058.0 7934.3 7664.4 8559.4 11153.6 10882.4 10491.0 True False 9202.471188961821 8555.552306123282 6518.964590100698 6717.7712422266695 9431.382848444027 8773.902359637912 9056.922270399458 9772.72116206313 8627.32740863925 8424.058281844953 7885.7951631297365 1.1669680734275525 1.0849320999516971 0.8266718137164284 0.8518825436445272 1.1959964281776847 1.1126211343480676 1.1485109723297608 1.2392816399487232 1.0940339217757733 1.0682573041247485 1.0 12.945040520979617 -6.7659109472948975 24.997460430813902 1.0823510462846442 0.9787834024202384 0.22075775577788048 0.11114100424489039 176.99606368770233 989469.517199922 0.017788713265758937 0.034449363269499864 1.7143087929425123e-07 6.7659109472948975 -0.10356764386440576 AVS(ph)DSFGPGEWDDR ddPTM_A549_PD325901_60min_R1 1 AVSDSFGPGEWDDR 14 0 C9JEN3;C9IYT2;F8WDY4;C9IZ27;C9JW19;C9JWV9;B4DUD2;Q969X1 C9JEN3 TMBIM1 Protein lifeguard 3 1 AVS(0.919)DS(0.081)FGPGEWDDR 155.98 5.9875e-19 17400000.0 3459.0 2821.3 2366.9 2606.7 3170.2 2796.3 2432.6 3098.2 2881.6 3018.4 4281.4 True False 3810.1551336187836 3059.060852353211 2527.5320673259394 2767.7099387547696 2947.536088596277 2773.5278599103103 2525.173924169798 3036.4039705091177 2760.496373033931 2827.8177088766342 3754.814942030731 1.0147384604680738 0.8147034939353809 0.6731442444827825 0.7371095464049418 0.7850016935860359 0.7386590025686572 0.6725162126909239 0.8086694064520069 0.7351883956073109 0.7531177308427496 1.0 11.87452609019295 -10.741342301776788 0.8733820489102899 1.0077802042652202 0.7679533869090494 0.0 0.11392916540593984 0.44532630897347286 0.5714565307344555 0.07116832074408865 0.016065590058647692 1.8140852752854046e-11 10.741342301776788 -0.23982681735617084 AVS(ph)FHLVHR ddPTM_A549_MK2206_60min_R1 2 AVSFHLVHR 9 0 Q96GA3 Q96GA3 LTV1 Protein LTV1 homolog 1 AVS(1)FHLVHR;AVS(1)FHLVHR 66.056 0.0017034000000000003 4251600.0 385.63 563.36 467.33 295.25 701.51 567.6 384.19 326.86 580.51 704.26 619.05 True False 450.7149162516951 592.0326176948871 533.6044211885447 367.5862632542761 598.3188082846776 627.6630552576131 453.99234996408995 373.193405966768 449.0254118839814 545.167176870188 465.3228000891685 0.9686069888802481 1.2723051988456993 1.1467403296943361 0.7899597079357311 1.2858145102067284 1.3488766403394286 0.9756503439700197 0.8020097143214432 0.9649761666480472 1.1715892210003875 1.0 8.862088068401574 -7.952013609008292 24.99936000042137 0.965553466839989 1.135677533595224 0.16926766535372317 0.16640641516647936 136.25665766783396 70984.96308460049 0.02385665673959304 0.0329627046052398 1.1168282504142757e-08 7.952013609008292 0.17012406675523506 AVS(ph)LDSPVSVGSSPPVK ddPTM_A549_PD325901_60min_R1 1 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVS(0.907)LDS(0.093)PVSVGSSPPVK 273.09 1.5552999999999994e-100 28685000.0 7707.0 9537.2 8744.1 8826.5 10939.0 8002.8 8619.5 8550.4 7761.8 7246.4 8559.6 True False 8489.408966406469 10340.933314806307 9337.527208544825 9371.692858564078 10170.682377501309 7937.627850119886 8947.51978927138 8379.855564340964 7435.598538386576 6788.861067321642 7506.823463774991 1.1308923151547459 1.377537831375365 1.2438719591054856 1.2484232383761549 1.3548583400929919 1.0573883731812517 1.1919182371143573 1.1162984722870979 0.9905119754404618 0.9043586944707097 1.0 12.873986840533487 -8.058383708458562 0.8532451750920991 0.9916809558493913 1.2710414078748826 0.6600192107651808 0.08472367191971981 0.21478248475328396 0.31274598655833613 0.015226655422786227 0.022851803613761677 8.742110497677186e-09 8.058383708458562 0.2793604520254913 AVS(ph)MDNSNK ddPTM_A549_MK2206_60min_R1 1 AVSMDNSNK 9 0 O43524;O43524-2 O43524 FOXO3 Forkhead box protein O3 1 AVS(1)MDNSNK 61.998999999999995 0.0030343 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AVS(ph)MDNSNK ddPTM_A549_PD325901_60min_R1 2 AVSMDNSNK 9 0 O43524;O43524-2 O43524 FOXO3 Forkhead box protein O3 1 AVS(0.999)MDNS(0.001)NK;AVS(0.999)MDNS(0.001)NK 74.84100000000001 0.00075251 36717000.0 4424.6 5010.3 5059.5 4522.7 5705.5 4505.6 3874.8 5630.799999999999 5075.6 5562.1 5919.700000000001 True False 4873.782134781633 5432.535564649382 5402.868095245082 4802.05690720305 5304.765362906454 4468.907887426918 4022.257634371918 5518.489276722855 4862.290182874455 5210.908056766076 5191.6144280700955 0.9387796806384539 1.0464058222961763 1.0406913244621514 0.9249640884806891 1.0217949419018046 0.860793487140409 0.7747604700041508 1.06296208109859 0.9365661202775296 1.003716306163197 1.0 12.341967525594095 -4.862751726071456 11.26066036650297 0.9655523172177434 0.0002896193122204403 0.009075150489570971 0.08385145998578189 1906514.7694006024 2242374.648096675 0.011064635117222157 45729894.23475449 1.3716656847266603e-05 4.862751726071456 -0.9652626979055229 AVS(ph)MDNSNKYTK ddPTM_A549_PD325901_60min_R1 2 AVSMDNSNKYTK 12 1 O43524;O43524-2 O43524 FOXO3 Forkhead box protein O3 1 AVS(0.773)MDNS(0.21)NKY(0.014)T(0.003)K;AVS(0.962)MDNS(0.035)NKY(0.001)T(0.002)K 50.843 0.0064191000000000005 17923300.0 5336.4 5679.9 5786.7 5770.2 6097.5 7167.3 7040.3 6246.5 7810.9 7381.4 7699.099999999999 True False 5878.147399549949 6158.565106610786 6179.420260253926 6126.612148924987 5669.232635233043 7108.931885110737 7308.222469099986 6121.9086572155475 7482.635036136426 6915.337144282397 6752.1595086160605 0.8705581365560408 0.912088213963574 0.9151768782074396 0.9073559564324796 0.8396176997890594 1.052838262490603 1.0823533507723513 0.9066593657042189 1.1081839856698061 1.0241667329478983 1.0 12.721133270397235 -7.271793725234496 24.83554595924412 1.0429557823103925 0.892722872318844 0.6271159604014573 0.053158644665093326 326.28178491145127 782606.604527668 0.008717516979789453 0.014026645989217948 5.348183191711575e-08 7.271793725234496 -0.1502329099915486 AVS(ph)PAPQSSSR ddPTM_A549_MK2206_60min_R1 2 AVSPAPQSSSR 11 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 AVS(0.992)PAPQS(0.005)S(0.002)S(0.002)R;AVS(1)PAPQSSSR 111.96 5.5593e-05 45581000.0 3384.3 3989.2 3523.7 2847.1 4717.1 3739.2 2909.3999999999996 3362.3999999999996 4629.799999999999 5274.700000000001 4595.0 True False 3955.487101809021 4192.233240749151 4023.4136454798027 3544.639627811174 4023.2208387045875 4134.879662119923 3438.000320116408 3839.0304969181334 3581.1576922713725 4083.14160656175 3453.9346844515444 1.1452118998124943 1.213755795563008 1.1648783237250726 1.026261337183923 1.1648225013680134 1.1971505080086673 0.9953866051935297 1.1114948161006521 1.0368342251498106 1.1821710540568946 1.0 11.754025085737142 -7.846796873767722 0.3363621601894772 0.9938231936748817 1.1907821813957011 0.0 0.07948560130583482 0.8836172914403508 0.23429793977769017 0.030749002610966105 0.06276919516392815 1.42299418784637e-08 7.846796873767722 0.19695898772081943 AVS(ph)PAPQSSSR ddPTM_A549_PD325901_60min_R1 2 AVSPAPQSSSR 11 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 AVS(0.999)PAPQSSSR;AVS(1)PAPQSSSR 118.31 1.586e-05 33306000.0 2796.1 2708.1 2562.3 2575.5 3200.4 2800.4 3032.8 3154.99 2893.8 2981.1 3129.3999999999996 True False 3079.958013619972 2936.3210910777752 2736.193086361592 2734.582785615111 2975.614944780619 2777.5944708696593 3148.2148636118395 3092.061249408224 2772.1836494605745 2792.872837242293 2744.5036389010525 1.122227702657826 1.0698914912911284 0.9969719287591151 0.9963851921544858 1.0842087809991419 1.0120571281085482 1.1470980832338922 1.1266376934542304 1.010085616272167 1.017624024124307 1.0 11.422329536826087 -8.959586674452977 24.643910777697943 1.0044494995415654 1.065930355629711 0.22688893042200742 0.04906419613848622 137.44958215510982 83816.72476166104 0.008795289935044373 0.009351152281078766 1.0975222300829167e-09 8.959586674452977 0.061480856088145686 AVS(ph)PAVPFSR ddPTM_A549_MK2206_60min_R1 2 AVSPAVPFSR 10 0 I3L2J0 I3L2J0 CIC 1 AVS(1)PAVPFSR;AVS(0.999)PAVPFS(0.001)R 111.5 0.00015897 97231000.0 1807.4 2215.76 2096.68 1982.1399999999999 2643.0299999999997 1711.72 1641.74 1590.56 3414.7000000000003 2581.4700000000003 2697.0 True False 2112.444933312539 2328.532719723842 2394.020751540877 2467.764388981645 2254.243788200669 1892.8530742522232 1940.0229069732277 1816.0267508857087 2641.275902155398 1998.3141340912216 2027.2604665866847 1.0420194978049762 1.148610530369791 1.1809142391908374 1.2172902444729465 1.1119655443171335 0.9336999884574455 0.9569677596681301 0.895803366571523 1.3028794008904716 0.9857214536698383 1.0 10.985315745796349 -5.235434575064957 20.75472678672985 1.1106910149939924 1.042018612545154 0.0 0.12921928104311342 3264.5784046803574 2605064.986143776 0.020435073647858404 1.404418117917523 5.8152102980642175e-06 5.235434575064957 -0.06867240244883832 AVS(ph)PAVPFSR ddPTM_A549_PD325901_60min_R1 4 AVSPAVPFSR 10 0 I3L2J0 I3L2J0 CIC 1 AVS(0.951)PAVPFS(0.049)R;AVS(0.999)PAVPFS(0.001)R;AVS(1)PAVPFSR;AVS(1)PAVPFSR 129.0 1.3922e-06 157878700.0 8992.74 9031.67 8449.32 9254.53 10275.17 9100.11 10471.720000000001 10614.73 9660.52 9171.53 9897.43 True False 9905.676344694708 9792.800527548627 9022.74166508869 9826.161299537414 9553.477506612136 9026.00172129185 10870.227034945052 10403.010883055402 9254.521939763237 8592.438030576903 8680.108854978092 1.14119264057544 1.1281886772574745 1.0394733310186652 1.1320320359694631 1.1006172464223374 1.0398489088204679 1.252314598417843 1.1984885278355946 1.0661757927673585 0.9898998012737006 1.0 13.083497419906996 -9.21104577661627 2.1368871192665284 1.0224752192935809 1.125626243667857 0.3989490633826228 0.06048442529892352 0.23195852083920593 2.1893242787833453 0.012714432392544564 0.011783084805580723 6.151120336830508e-10 9.21104577661627 0.10315102437427615 AVS(ph)PFAK ddPTM_A549_MK2206_60min_R1 2 AVSPFAK 7 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 AVS(1)PFAK;AVS(1)PFAK 79.906 0.016109000000000002 26689000.0 7027.6 6343.6 6255.0 5602.1 7884.9 6183.3 5523.0 5641.1 7953.9 8851.5 9879.2 True False 8213.687071675991 6666.462144293674 7142.053055730101 6974.614751487823 6725.041655063874 6837.61270185765 6526.4576091300305 6440.743200144213 6152.354349768305 6851.940002366265 7425.921987950749 1.1060831348623732 0.8977285453726326 0.9617732407260334 0.9392254272001223 0.9056170622282164 0.9207762636009796 0.8788750568238957 0.867332461961615 0.8284970350821182 0.9227056267873776 1.0 12.858354443890862 AVS(ph)PFAK ddPTM_A549_PD325901_60min_R1 2 AVSPFAK 7 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 AVS(1)PFAK;AVS(1)PFAK 80.438 0.015868 31631000.0 6981.5 6686.3 7642.5 6200.8 8197.7 7334.0 8189.7 6515.1 7651.4 7583.0 7973.799999999999 True False 7690.256740491341 7249.777966571889 8161.166008085887 6583.809332961436 7621.921832529713 7274.274335579955 8501.363515075798 6385.151219502923 7329.838266460235 7104.208085877122 6993.073150082829 1.099696310255278 1.0367084414791257 1.1670356984595853 0.9414758278173387 1.0899245108625006 1.0402113891077767 1.2156834817286453 0.9130679863440717 1.0481569560549238 1.0158921454715482 1.0 12.771710881042612 -14.999999992726417 0.08053315884172683 0.7790834820569925 1.1278287822406596 0.08856333870529609 0.08123820035855676 275.1053715025949 1.6370266493742025 10.708722692248068 1.086178856390413 1.000000016748043e-15 14.999999992726417 0.3487453001836671 AVS(ph)PPHLDGPPS(ph)PR ddPTM_A549_MK2206_60min_R1 3 AVSPPHLDGPPSPR 14 0 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 2 AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR 84.499 8.3258e-05 25516500.0 4168.47 4468.540000000001 3846.58 3627.34 6322.16 4867.65 3460.487 5197.97 6367.780000000001 5957.12 5686.139999999999 True False 4872.005826693213 4695.969599322479 4392.082884589971 4516.038462837483 5392.178638914714 5382.741492115437 4089.2126946307376 5934.798165615497 4925.487997255135 4611.402454600477 4274.114508519543 1.1398865933474407 1.098699997382395 1.0276006587645894 1.056602122810635 1.2615896528196768 1.2593816757567164 0.9567391529823913 1.3885444935519937 1.1523996344593055 1.0789141108429878 1.0 12.06140984466269 -10.516371807728138 1.0289739315387234 1.006941358207366 1.147058795819282 0.10395268058096063 0.11693918764276214 0.6486757404102872 1.308227609978767 0.05835345564443368 0.020190966680289944 3.0452867456666147e-11 10.516371807728138 0.14011743761191586 AVS(ph)PPHLDGPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AVSPPHLDGPPSPR 14 0 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 2 AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR 102.33 9.6612e-06 33710000.0 1584.49 1410.38 1604.12 1218.27 1684.1399999999999 1608.6399999999999 1507.23 1286.96 1411.65 1400.79 1759.09 True False 1745.3462583601124 1529.2376723290408 1712.9852295571798 1293.5197710080831 1565.851816367589 1595.5397691828912 1564.5884624379037 1261.2905731994117 1352.3232596451098 1312.3438803396828 1542.7330817902646 1.1313339157378575 0.9912522719448247 1.1103574881335572 0.8384598646883349 1.0149855699927666 1.0342293090204218 1.0141666636345654 0.8175688899700958 0.8765763018939131 0.8506616574377036 1.0 10.591272758179088 -3.5039933948398554 0.4857135016129508 0.9398368005693746 2.0570486264281604 0.3306605979539943 0.08497965115208635 19.163351634797415 0.7951356125930966 0.016235795662233325 17.930659263171243 0.000313333337864285 3.5039933948398554 1.117211825858786 AVS(ph)PSNPK ddPTM_A549_MK2206_60min_R1 2 AVSPSNPK 8 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AVS(0.949)PS(0.051)NPK;AVS(0.989)PS(0.011)NPK 126.49 0.0010750999999999998 597630000.0 18046.5 15995.2 13889.5 13032.599999999999 18214.5 13201.1 14181.400000000001 12780.1 19631.3 20109.6 27689.6 True False 21092.30800543584 16809.287358976948 15859.239954846234 16225.58758505565 15535.171178602239 14598.031639819024 16757.976812985085 14591.718312414774 15184.841894744273 15566.827393276233 20813.508125917193 1.013395141166591 0.8076143270651165 0.7619686147525581 0.7795700507043011 0.7463984968135998 0.7013729521954738 0.8051490748990019 0.701069623829777 0.7295666738581159 0.7479194424649759 1.0 14.345232531999418 -10.775864263118487 1.0084170336388347 1.000876593758863 0.7757603171021933 0.0 0.10920615278969265 0.35453591511985927 0.6362492485774427 0.05705006578954772 0.014199284857325994 1.6754664540702606e-11 10.775864263118487 -0.22511627665666978 AVS(ph)PSNPK ddPTM_A549_PD325901_60min_R1 4 AVSPSNPK 8 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AVS(0.915)PS(0.085)NPK;AVS(0.992)PS(0.008)NPK;AVS(0.997)PS(0.003)NPK;AVS(0.998)PS(0.002)NPK 153.7 0.0004838 1073190000.0 59882.4 58975.4 64594.6 62389.3 74392.5 77079.9 70565.7 70828.6 72061.1 66778.5 69320.0 True False 65961.61716490696 63945.463932184284 68978.3779948846 66242.94536461918 69167.42744019255 76452.18685015943 73251.1163285327 69415.86800903805 69032.62256622544 62562.094113509964 60794.07945568511 1.0850006736756108 1.051837029275134 1.1346232826037823 1.089628232843067 1.1377329512919274 1.2575597415845083 1.2049054280347802 1.1418195428000133 1.135515549940117 1.0290820203818305 1.0 15.891643210523807 -10.46221287772689 0.8362372259787856 1.0016062068843645 1.1387695507220357 0.43119492452411134 0.054093705102786334 0.458076525603403 0.5865721492191969 0.03728214082229121 0.011349590835420536 3.4497460200281485e-11 10.46221287772689 0.13716334383767115 AVS(ph)PSSSEK ddPTM_A549_MK2206_60min_R1 2 AVSPSSSEK 9 0 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 AVS(0.994)PS(0.005)S(0.001)SEK;AVS(0.993)PS(0.005)SS(0.001)EK 121.9 0.00012044 58250000.0 6035.3 7502.5 5730.5 5257.4 6296.4 6020.700000000001 5837.7 6734.7 6117.1 8137.799999999999 8736.0 True False 7053.9110910817535 7884.345204231555 6543.171068882705 6545.46323601365 5370.20790079064 6657.806477782794 6898.334525587256 7689.364349153742 4731.5866170014315 6299.465328052442 6566.610098665657 1.0742089122232363 1.2006720493171452 0.9964305738530579 0.9967796378444483 0.8178052023953537 1.013887893105709 1.0505168453642477 1.1709792775295478 0.7205523924685121 0.9593177047823352 1.0 12.680933080480598 -5.540272689982986 0.43617080542741893 0.8948861425674627 1.2806741556404073 0.06573370407339563 0.12727288555385044 4.597761992053954 0.676711382871067 0.03463219601612357 0.8732589020530792 2.8822212115289523e-06 5.540272689982986 0.38578801307294464 AVS(ph)PSSSEK ddPTM_A549_PD325901_60min_R1 2 AVSPSSSEK 9 0 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 AVS(0.995)PS(0.005)SSEK;AVS(0.991)PS(0.008)S(0.001)SEK 133.12 4.7283999999999997e-05 86452000.0 15074.8 15771.5 16123.4 15284.8 16684.6 15419.4 14004.6 15166.9 16176.7 16212.599999999999 16889.8 True False 16605.18259851878 17100.619655084054 17217.63088188054 16228.90738170058 15512.731254745262 15293.82951868578 14537.552716611168 14864.384281297118 15496.849554989594 15188.933669140375 14812.46167326357 1.1210278861677032 1.1544752001587015 1.1623747127027706 1.095625274156401 1.0472757058838962 1.0324974913718141 0.9814406975210197 1.0035053328190053 1.0462035208476752 1.0254158967078602 1.0 13.85452380064125 -6.688333265074618 1.8943677944168675 1.018321593073816 1.1472192082249577 0.8944005169557125 0.019512117589986094 0.08931637054790495 0.6486182261450602 0.0034691654153658777 0.008535887347442643 2.0495887798254515e-07 6.688333265074618 0.12889761515114162 AVS(ph)PTEPTPR ddPTM_A549_MK2206_60min_R1 2 AVSPTEPTPR 10 0 H3BMH3;Q6PJI9-3;Q6PJI9;Q6PJI9-2 H3BMH3 WDR59 WD repeat-containing protein 59 1 AVS(0.954)PT(0.046)EPTPR;AVS(0.967)PT(0.033)EPTPR 161.51 8.0745e-09 24824000.0 3207.0 3837.0 3126.8 2902.7 3846.7 3452.8999999999996 3007.5 2756.0 5251.1 4815.9 4638.4 True False 3748.2631963778435 4032.286910847916 3570.2272573392283 3613.8616303071553 3280.8555256926757 3818.283586150481 3553.9238202894408 3146.67143989602 4061.734234283602 3727.984845212188 3486.557266672478 1.0750614172344095 1.1565239296058587 1.0239978822279905 1.0365129134265374 0.9410014735894124 1.0951443771335494 1.0193217975396276 0.9025153465783052 1.1649698896700083 1.0692452640452756 1.0 11.76758746273478 -11.409910284295155 2.1910150369657604 0.9992764309758287 1.0664196161885013 0.0 0.08016715575990657 0.7449727913964006 6.472617878543017 0.0687020044313913 0.01250054236069668 3.891255214813116e-12 11.409910284295155 0.0671431852126726 AVS(ph)PTEPTPR ddPTM_A549_PD325901_60min_R1 1 AVSPTEPTPR 10 0 H3BMH3;Q6PJI9-3;Q6PJI9;Q6PJI9-2 H3BMH3 WDR59 WD repeat-containing protein 59 1 AVS(0.938)PT(0.062)EPTPR 172.56 1.5138e-10 14954000.0 2321.4 2302.1 1984.0 2151.0 2257.9 2461.3 2112.0 2020.8 2115.1 2556.1 2325.4 True False 2557.0668190756437 2496.106046220653 2118.646170761191 2283.8623847245603 2099.3128933321345 2441.255988841414 2192.3733157307465 1980.4935587130674 2026.2097024583813 2394.707409773244 2039.3905419251334 1.253838716277382 1.223947054233365 1.038862408747489 1.1198749517435005 1.0293824798022433 1.1970517361215816 1.0750139665064844 0.9711203018738781 0.9935368732982798 1.1742269862214327 1.0 10.993922361608893 -2.0000000000000067 0.24737784435089621 0.9861171363307558 2.660360286142193 0.28000393434560067 0.08154743662304206 21.003387152469443 0.2542724084598858 0.02906197162059912 14.815185104717868 0.009999999999999846 2.0000000000000067 1.6742431498114372 AVS(ph)PVRPSGR ddPTM_A549_MK2206_60min_R1 2 AVSPVRPSGR 10 1 P47928 P47928 ID4 DNA-binding protein inhibitor ID-4 1 AVS(1)PVRPSGR;AVS(1)PVRPSGR 66.023 0.0014711 32474000.0 3722.5 3913.8999999999996 3367.1 3498.2 4716.0 3949.7000000000003 2927.8 3334.1 4675.2 4796.8 5687.4 True False 4350.766993612882 4113.100792381458 3844.605410703249 4355.2591570401655 4022.282647247423 4367.654632401333 3459.7433619429485 3806.7188852530207 3616.274664760277 3713.199548477717 4275.061615745314 1.0177086050850683 0.9621149733217073 0.8993099412984673 1.018759388402609 0.9408712689503957 1.021658873012495 0.809285028594793 0.8904477238954034 0.8459000102925571 0.8685721709370867 1.0 12.061729498131875 AVS(ph)PVRPSGR ddPTM_A549_PD325901_60min_R1 2 AVSPVRPSGR 10 1 P47928 P47928 ID4 DNA-binding protein inhibitor ID-4 1 AVS(1)PVRPSGR;AVS(1)PVRPSGR 77.89399999999999 0.00038193 62954000.0 7343.2 7846.0 7281.200000000001 6959.0 8286.9 7892.0 7882.9 7440.3 7718.6 8436.099999999999 9393.5 True False 8088.676258221879 8507.2099555394 7775.346017412498 7388.841624964301 7704.856732253008 7827.73016858426 8182.888073188393 7291.897379697564 7394.2140841545315 7903.443206286168 8238.159050302625 0.9818548305309479 1.0326591054620256 0.9438208184542 0.896904463709386 0.9352643819094477 0.9501795389950273 0.9932908582151977 0.8851367563035457 0.8975566068832949 0.9593700677575335 1.0 13.00810626457884 -5.776405781130954 24.602525659421293 0.9438430827167884 1.0072569583802597 0.3251142798793587 0.036971927945756385 189.19313306927458 311007.1623619735 0.006310339867601114 0.019742533581399744 1.6733786314344998e-06 5.776405781130954 0.06341387566347134 AVS(ph)WTFSEENVIR ddPTM_A549_PD325901_60min_R1 2 AVSWTFSEENVIR 13 0 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AVS(0.999)WT(0.001)FSEENVIR;AVS(0.956)WT(0.043)FS(0.001)EENVIR 127.76 5.4195e-08 3513800.0 2524.9 2296.9 3088.6000000000004 2735.6000000000004 2664.0 2622.8 2884.6 2538.6 3197.1 2545.8 3220.9 True False 2781.2259892668612 2490.4678239712525 3298.210969260593 2904.571799001628 2476.889830301077 2601.4407863865695 2994.375031513688 2487.965631506827 3062.737005214734 2385.0577535310535 2824.749718967343 0.9845920049453468 0.8816596412944169 1.1676117523312244 1.028258107080533 0.876852845995349 0.9209455864067101 1.0600496785281053 0.8807738309701874 1.0842507513672373 0.8443430359568175 1.0 11.46390733088 -8.805240928329054 24.99923719795384 1.0397850531519603 0.9779197676880056 0.0 0.10411028668351739 244.23525686865185 139393.51992552434 0.015091487816098028 0.016066155959740057 1.5658821434952335e-09 8.805240928329054 -0.061865285463954756 AVSDS(ph)FGPGEWDDR ddPTM_A549_MK2206_60min_R1 2 AVSDSFGPGEWDDR 14 0 C9JEN3;C9IYT2;F8WDY4;C9IZ27;C9JW19;C9JWV9;B4DUD2;Q969X1 C9JEN3 TMBIM1 Protein lifeguard 3 1 AVS(0.032)DS(0.968)FGPGEWDDR;AVS(0.004)DS(0.996)FGPGEWDDR 145.43 4.3669e-13 21107600.0 3970.7 3562.1 3105.2 2657.3 5220.8 3728.5 3784.2 4628.299999999999 6232.200000000001 4903.6 5602.1 True False 4640.857085705486 3743.395675040749 3545.564052542462 3308.33861929073 4452.827235951938 4123.0473952220045 4471.740156521793 5284.375698574294 4820.6166507783655 3795.8733543018957 4210.943959905547 1.1020942406010035 0.8889682956323919 0.8419879452924351 0.785652492835582 1.0574415804032256 0.9791266363265699 1.06193295353712 1.2549147528177564 1.1447829029970027 0.9014305083240858 1.0 12.039927960619265 -7.210847641464813 1.7684217232095742 1.0839967605231795 0.9055206914003143 0.24846270624035827 0.11597434747520072 0.3107960814196642 1.895196032500064 0.01723982094187307 0.03316315253313204 6.15392725993059e-08 7.210847641464813 -0.17847606912286518 AVSDS(ph)FGPGEWDDR ddPTM_A549_PD325901_60min_R1 1 AVSDSFGPGEWDDR 14 0 C9JEN3;C9IYT2;F8WDY4;C9IZ27;C9JW19;C9JWV9;B4DUD2;Q969X1 C9JEN3 TMBIM1 Protein lifeguard 3 1 AVSDS(1)FGPGEWDDR 282.26 2.356199999999999e-99 25282000.0 7732.8 6616.7 6937.7 7001.0 6618.7 7234.8 6059.3 5728.5 8837.5 8654.0 9143.6 True False 8517.828163413515 7174.312530310667 7408.534041779196 7433.43586957538 6153.82534527543 7175.882187490295 6289.889977276185 5614.24057357869 8466.090608234092 8107.58496309912 8018.995166056009 1.0622064220052208 0.8946647780359265 0.9238731148185668 0.9269784699510394 0.7674060425082002 0.8948605204135093 0.7843738332579328 0.700117715165047 1.0557545469126375 1.0110474935086764 1.0 12.969205753291067 -8.8093229919486 24.999845041691103 1.0263286280735329 0.8685194637237513 0.3545451658627725 0.09186445824963127 88.29718787299356 46099.21480430101 0.016109007892379006 0.017148960691223774 1.5512329034254163e-09 8.8093229919486 -0.15780916434978154 AVSDS(ph)FGPGEWDDRK ddPTM_A549_MK2206_60min_R1 2 AVSDSFGPGEWDDRK 15 1 C9JEN3;C9IYT2;F8WDY4;C9IZ27;C9JW19;C9JWV9;B4DUD2;Q969X1 C9JEN3 TMBIM1 Protein lifeguard 3 1 AVS(0.108)DS(0.892)FGPGEWDDRK;AVS(0.051)DS(0.949)FGPGEWDDRK 118.53 3.1476999999999995e-07 27703000.0 3818.1 3359.0 2716.8999999999996 2406.5 4857.0 3473.7 3283.5 3382.3 5048.5 4775.4 4589.299999999999 True False 4462.501936417284 3529.958752550988 3102.197273719123 2996.0926080318914 4142.541734028997 3841.2846283445565 3880.0694476875724 3861.7513828593287 3905.0228107978805 3696.6338233406627 3449.6501517635393 1.2936100010419758 1.0232802160376735 0.8992788071953354 0.8685207126004418 1.2008585079015146 1.113528752004259 1.12477186873689 1.1194617462542147 1.1320054611339485 1.0715967303092633 1.0 11.75223434223162 -5.255929455527344 23.884228674304556 1.0586190696331568 1.2936101922018761 0.3331696905706949 0.09680856402145434 313.7133153264412 1359791.1022780237 0.01424543886180657 0.16808807911189172 5.5471581070940365e-06 5.255929455527344 0.23499112256871935 AVSDS(ph)FGPGEWDDRK ddPTM_A549_PD325901_60min_R1 4 AVSDSFGPGEWDDRK 15 1 C9JEN3;C9IYT2;F8WDY4;C9IZ27;C9JW19;C9JWV9;B4DUD2;Q969X1 C9JEN3 TMBIM1 Protein lifeguard 3 1 AVS(0.021)DS(0.979)FGPGEWDDRK;AVS(0.032)DS(0.968)FGPGEWDDRK;AVS(0.002)DS(0.998)FGPGEWDDRK;AVS(0.142)DS(0.858)FGPGEWDDRK 169.61 1.5204000000000002e-27 43733700.0 9239.5 10269.5 9239.4 9847.2 8982.0 9619.2 9729.2 8785.4 11420.9 10793.4 13080.600000000002 True False 10177.487238239602 11134.946805813379 9866.441245025684 10455.439179386189 8351.135306217822 9540.864424435596 10099.450030022528 8610.168304987026 10940.91929024959 10111.902881986834 11471.769124755258 0.8871767839432292 0.9706390256569024 0.8600627451379412 0.91140599725147 0.7279727490502462 0.83168204665548 0.8803742404672908 0.7505527884454106 0.9537255475827062 0.8814597619617424 1.0 13.485800274015507 -8.945297730166866 10.383448575586089 0.9796421051774254 0.8544758433406751 0.2198742818700602 0.07127706568164979 0.31593906556732354 58.23778769669418 0.011548489836224219 0.012252191333687821 1.134232976746577e-09 8.945297730166866 -0.1251662618367504 AVSDWIDEQEKGSSEQAES(ph)DNMDVPPEDDSKEGAGEQK ddPTM_A549_MK2206_60min_R1 4 AVSDWIDEQEKGSSEQAESDNMDVPPEDDSKEGAGEQK 38 2 Q12906-5;Q12906-2;Q12906-3;Q12906;K7ER69;K7EKJ9;K7EM82;K7EJ09;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 AVSDWIDEQEKGS(0.001)S(0.001)EQAES(0.998)DNMDVPPEDDSKEGAGEQK;AVSDWIDEQEKGS(0.002)S(0.002)EQAES(0.992)DNMDVPPEDDS(0.003)KEGAGEQK;AVSDWIDEQEKGS(0.005)S(0.031)EQAES(0.964)DNMDVPPEDDSKEGAGEQK;AVSDWIDEQEKGS(0.006)S(0.006)EQAES(0.987)DNMDVPPEDDSKEGAGEQK 110.09 7.3087e-15 49117900.0 4610.68 5306.2 4359.0599999999995 3999.96 6632.3 4931.3 4419.200000000001 3820.9 8124.900000000001 8040.700000000001 8786.400000000001 True False 5388.850063696723 5576.262915387337 4977.2402546939775 4979.950379565029 5656.6974557546855 5453.126892867987 5222.111436948659 4362.524276015495 6284.623122799191 6224.300285491319 6604.4943876964235 0.8159368071741667 0.8443133702672851 0.7536141243402563 0.7540244698886 0.8564921284954987 0.8256690933111656 0.7906905707539067 0.6605387210476678 0.9515676377145352 0.9424340335706286 1.0 12.689232403699085 -8.90485215918815 7.918746171577345 0.9787556034419993 0.7910863647200806 0.6910508930818379 0.05271096250550396 0.08928737335627836 6.560752423103551 0.009180212868331122 0.009746604574848121 1.2449383366363504e-09 8.90485215918815 -0.18766923872191865 AVSDWIDEQEKGSSEQAES(ph)DNMDVPPEDDSKEGAGEQK ddPTM_A549_PD325901_60min_R1 2 AVSDWIDEQEKGSSEQAESDNMDVPPEDDSKEGAGEQK 38 2 Q12906-5;Q12906-2;Q12906-3;Q12906;K7ER69;K7EKJ9;K7EM82;K7EJ09;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 AVSDWIDEQEKGS(0.001)S(0.003)EQAES(0.994)DNMDVPPEDDS(0.002)KEGAGEQK;AVSDWIDEQEKGS(0.01)S(0.034)EQAES(0.956)DNMDVPPEDDSKEGAGEQK 149.37 2.8319999999999998e-40 56711000.0 3939.3 3588.0 3067.6000000000004 3814.3 3773.3 4857.8 3103.4 3912.8 4335.4 4820.9 4969.1 True False 4339.2148360406145 3890.373352087094 3275.785782977334 4049.900648096184 3508.276425178327 4818.239687398454 3221.501585245641 3834.756134467783 4153.198214759616 4516.507551260061 4357.932201720212 0.9957049892441628 0.8927108481750685 0.7516835121217074 0.9293170385940289 0.8050323554353371 1.1056252058020877 0.7392271004064757 0.8799485528834259 0.9530203827219292 1.0363877504742396 1.0 12.089428036645305 -8.942904710516576 2.7954787455872228 0.9813216375815036 0.8842506609878095 0.18654095848399121 0.100946738905263 0.33365879130372206 5.102769997761398 0.017372964363763392 0.01784976272586843 1.140499999660595e-09 8.942904710516576 -0.09707097659369412 AVSEDVSNGSSGS(ph)PSPGDTLPWNLGK ddPTM_A549_MK2206_60min_R1 1 AVSEDVSNGSSGSPSPGDTLPWNLGK 26 0 Q15149-3;Q15149-2;H0YDN1;E9PMV1 Q15149-3 PLEC Plectin 1 AVSEDVS(0.01)NGS(0.249)S(0.201)GS(0.269)PS(0.269)PGDT(0.003)LPWNLGK 65.753 0.00010086 1469600.0 239.02 458.93 507.63 527.17 861.7 606.97 601.96 658.06 1020.1 1199.3 805.4 True False 279.3607325220554 482.2875767514812 579.6195671751032 656.3266736655606 734.9450714870878 671.199162525922 711.3283401035519 751.342020224229 789.0489787649641 928.377297049976 605.3969520908105 0.461450510375465 0.7966468530867947 0.9574206893069381 1.084126161188718 1.213988720869617 1.1086926688478622 1.1749783966485043 1.2410733447358462 1.3033580298676586 1.5335017691181207 1.0 9.241737601619137 -5.278031630813152 0.9624531712782637 1.158864815156045 0.10044695780392253 0.7439377946964267 0.13592043868030876 0.6512793754101528 0.46143717400448886 0.017143657109216642 0.7103665787770024 5.271914632790742e-06 5.278031630813152 -1.0584178573521226 down AVSEDVSNGSSGS(ph)PSPGDTLPWNLGK ddPTM_A549_PD325901_60min_R1 1 AVSEDVSNGSSGSPSPGDTLPWNLGK 26 0 Q15149-3;Q15149-2;H0YDN1;E9PMV1 Q15149-3 PLEC Plectin 1 AVSEDVSNGS(0.023)S(0.126)GS(0.715)PS(0.126)PGDT(0.011)LPWNLGK 91.113 4.6092e-09 1846100.0 904.14 698.65 870.19 684.21 762.78 938.3 1035.7 1093.2 1073.9 1064.4 1174.1 True False 995.9276272073112 757.5276874123886 929.246326277561 726.4720977463461 709.2049642481443 930.6587958923737 1075.114130256787 1071.39526840119 1028.767717587847 997.1936023483597 1029.6931432331196 0.9672081762924161 0.7356829482556693 0.9024497564000795 0.7055229050718024 0.6887537019245571 0.9038214947903904 1.044111187223264 1.0404995657610483 0.9991012607480644 0.9684376446533236 1.0 10.007998751494402 -7.527172451556037 5.232345631453757 1.005598047046213 0.7961400733504364 0.6179103858070163 0.07878943419162276 0.08332076059595203 7.0340094171276295 0.01120089328833337 0.01722044737600605 2.9704862638169336e-08 7.527172451556037 -0.20945797369577657 AVSEGCAS(ph)EDEVEGEA ddPTM_A549_MK2206_60min_R1 1 AVSEGCASEDEVEGEA 16 0 Q9BYX2-6;Q9BYX2-5;Q9BYX2-4;Q9BYX2-2;Q9BYX2 Q9BYX2-6 TBC1D2 TBC1 domain family member 2A 1 AVS(0.008)EGCAS(0.992)EDEVEGEA 70.332 0.0014355000000000001 763110.0 0.0 0.0 0.0 0.0 288.36 195.19 0.0 119.34 376.99 0.0 138.59 True False 0.0 0.0 0.0 0.0 245.94262598818213 215.84487624336418 0.0 136.256810463422 291.60236692932415 0.0 104.17427811058533 0.0 0.0 0.0 0.0 2.360876700552739 2.0719594141486235 0.0 1.3079698072760315 2.799178186958743 0.0 1.0 6.702855292504055 -6.747920476273105 24.52902718221216 1.730529864979751 7.724997541832377e-07 0.31151713960063676 0.8716556894289503 127.02465376507155 230474.7227133543 0.12336803972664899 0.25563365166660285 1.786814728808129e-07 6.747920476273105 -1.7305290924799968 AVSEGCAS(ph)EDEVEGEA ddPTM_A549_PD325901_60min_R1 2 AVSEGCASEDEVEGEA 16 0 Q9BYX2-6;Q9BYX2-5;Q9BYX2-4;Q9BYX2-2;Q9BYX2 Q9BYX2-6 TBC1D2 TBC1 domain family member 2A 1 AVSEGCAS(1)EDEVEGEA;AVS(0.071)EGCAS(0.929)EDEVEGEA 78.763 0.00035969 1476610.0 135.46 0.0 0.0 386.81 274.67 175.04 147.87 0.0 345.07 122.86 445.65999999999997 True False 149.21179947961858 0.0 0.0 410.7023751907516 255.37812676005908 173.61453227432708 153.49727376756883 0.0 330.5679079132491 115.10259863258122 390.84664527150363 0.38176558833188357 0.0 0.0 1.0508018430232529 0.653397259128729 0.44420115760165946 0.39273018106869295 0.0 0.8457739420626685 0.29449555222003915 1.0 8.610458844609406 -8.913230606804301 0.17153824500118064 1.3500191730631173 1.838384431894261e-09 0.0 0.39422545439884266 2.8336352777577094 0.39257914466904764 1.450891118077781 1.197409664177713 1.2211510667905058e-09 8.913230606804301 -1.350019171224733 AVSETPAVPPVS(ph)EDEDDDDDDATPPPVIAPRPEHTK ddPTM_A549_PD325901_60min_R1 1 AVSETPAVPPVSEDEDDDDDDATPPPVIAPRPEHTK 36 1 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 AVSETPAVPPVS(1)EDEDDDDDDATPPPVIAPRPEHTK 140.73 1.0939999999999999e-39 165640000.0 11285.0 11042.0 9681.4 10857.0 11960.0 11526.0 10387.0 10323.0 13755.0 12347.0 11963.0 True False 12430.644892422079 11972.548091902363 10338.438022987604 11527.612231963994 11119.97085976009 11432.136077433119 10782.282968984497 10117.099666763168 13176.925184300993 11567.408312847801 10491.626839705154 1.1848157661668623 1.1411526805921766 0.9853989453630001 1.0987440182620862 1.059890046572853 1.0896437942463455 1.0277036282094372 0.9643022785060748 1.2559468026858744 1.1025371460097488 1.0 13.356950780210019 -8.73794382088884 24.999640704927558 1.1208638514888754 1.0685829377459173 0.07096766539492061 0.08138672967528691 612.519694533059 651730.9613426337 0.017988933634309243 0.020392505767195382 1.8283367093343007e-09 8.73794382088884 -0.05228091374295807 AVSGGS(ph)PER ddPTM_A549_MK2206_60min_R1 2 AVSGGSPER 9 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 AVS(0.005)GGS(0.995)PER;AVS(0.009)GGS(0.991)PER 77.192 0.0019325 7096300.0 1708.08 1953.89 1959.01 1358.17 1789.57 1667.6599999999999 1540.37 1808.35 2122.0 3027.8 3111.3999999999996 True False 1996.3621454534039 2053.334655261046 2236.827075412603 1690.9217109705692 1526.326623629044 1844.1306742968834 1820.2352901277613 2064.689150339611 1641.3703881376866 2343.817877101573 2338.7535097285177 0.853600919100338 0.877961121905231 0.9564184793771848 0.7230012499978467 0.6526239799448639 0.7885100617169998 0.778292916528452 0.882816056395477 0.7018141849109258 1.0021654130510071 1.0 11.191524103158239 -10.97744676161217 1.2223266059110562 1.0010281316177194 0.7930869138846899 0.4472184415634569 0.08483512349977267 0.3806475027986011 1.0032942143553327 0.06663885251817908 0.015027625113310662 1.0533027993066762e-11 10.97744676161217 -0.20794121773302954 AVSGGS(ph)PER ddPTM_A549_PD325901_60min_R1 2 AVSGGSPER 9 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 AVS(0.011)GGS(0.989)PER;AVS(0.003)GGS(0.997)PER 70.363 0.0035904000000000005 8590900.0 2453.6000000000004 2688.2 2952.0 2637.6000000000004 2977.3 3160.5 2948.6000000000004 3030.5 2812.3 2966.0 3386.0 True False 2702.6876657551475 2914.744048238719 3152.340471818063 2800.5185615757796 2768.184719127403 3134.7619358604334 3060.810586535832 2970.0543001187402 2694.1088110366913 2778.7262538192736 2969.543465622473 0.9101357488258258 0.9815461810819911 1.0615572758276743 0.9430805085012411 0.9321920191348803 1.0556376669177083 1.0307343946872412 1.000172024589699 0.907246801478272 0.9357419030863721 1.0 11.536025434371917 AVSGGS(ph)PERR ddPTM_A549_MK2206_60min_R1 2 AVSGGSPERR 10 1 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 AVS(0.002)GGS(0.998)PERR;AVS(0.001)GGS(0.999)PERR 72.29 0.00092364 17110000.0 2389.0 2239.9 2014.75 1736.46 2353.09 1908.3200000000002 2103.77 2040.13 2940.0 3250.0 3133.3 True False 2792.2047945577388 2353.9013426135657 2300.4718455686993 2161.8927779526507 2006.9535781194743 2110.2571557597043 2485.9977773600385 2329.324675136091 2274.0946942152673 2515.822742776972 2355.2151353192667 1.1855412920396484 0.999442177198168 0.976756565067188 0.9179173254844043 0.8521317428810667 0.89599337407181 1.055528957877151 0.9890071782424811 0.9655570992698284 1.0681923298849445 1.0 11.20164313239073 -5.24340775729577 2.885817382644866 0.9693641316563355 1.2287506429661068 0.5114442131420738 0.0605781452494438 0.2598278953931256 2.914425237929758 0.007860757896248922 0.15979016706971555 5.70942329547316e-06 5.24340775729577 0.2593865113097713 AVSGGS(ph)PERR ddPTM_A549_PD325901_60min_R1 2 AVSGGSPERR 10 1 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 AVSGGS(1)PERR;AVS(0.004)GGS(0.996)PERR 111.52 4.0181e-09 11023000.0 1520.9 1353.4 1463.9 1434.7 1557.5 1600.7 1441.0 1743.5 1749.4 1734.9 1764.5 True False 1675.3006483725956 1467.4557677577122 1563.2490571458202 1523.3181605598902 1448.1065730833066 1587.664429910393 1495.8380435454571 1708.724524750709 1675.8788017023742 1625.358117920113 1547.477686087079 1.0826008435757979 0.9482888063273412 1.0101916629884469 0.9843878036210796 0.935785107664434 1.0259691911454498 0.9666297982801957 1.1041997827260148 1.0829744536995345 1.0503273375333513 1.0 10.595702891255998 -8.235062681302125 24.981961377594846 1.0451534945030487 0.9910070083168977 0.31275256531871787 0.04520126805645156 873.5686734502622 827377.9534636877 0.007792208907176575 0.01005804882190295 5.820192094395612e-09 8.235062681302125 -0.05414648618615103 AVSLDS(ph)PVSVGSSPPVK ddPTM_A549_MK2206_60min_R1 1 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVS(0.005)LDS(0.973)PVS(0.018)VGS(0.003)S(0.001)PPVK 63.128 0.0020814 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AVSLDS(ph)PVSVGSSPPVK ddPTM_A549_PD325901_60min_R1 1 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVS(0.124)LDS(0.876)PVSVGSSPPVK 265.64 7.653999999999998e-100 23732000.0 9553.1 8997.7 10012.0 10895.0 11684.0 10364.0 10523.0 9907.3 8342.7 9685.5 9963.5 True False 10522.923679379479 9755.967756430891 10691.474527046901 11567.959405659725 10863.356147611792 10279.599020173244 10923.458523406553 9709.691129373503 7992.085331520748 9073.955877062233 8738.052663830329 1.2042641632199491 1.1164922130549804 1.2235534550280782 1.323860115142509 1.2432239270631535 1.176417608779572 1.2501021616203272 1.111196224482041 0.9146300255894102 1.038441426958013 1.0 13.09309608552523 -8.559687123991283 3.7806891317704405 0.9600610054087266 1.2180285082364393 0.7639650827798828 0.05687601539573848 0.06909731022586656 2.1189254883397264 0.010064129466196066 0.011622555360496624 2.756213629696544e-09 8.559687123991283 0.25796750282771264 AVSLDSPVSVGS(ph)SPPVK ddPTM_A549_MK2206_60min_R1 1 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVSLDSPVSVGS(0.935)S(0.065)PPVK 223.06 1.7375999999999995e-63 13093000.0 2059.3 1879.7 1973.3 1895.4 2875.3 2385.2 1658.5 2228.8 2785.2 3072.7 3312.2 True False 2406.8594949488265 1975.3687011521565 2253.1436122897207 2359.77308508774 2452.3471788868787 2637.6002808323788 1959.8279820282735 2544.739225413732 2154.3566470504634 2378.5749359171705 2489.6893279304477 0.9667308559134672 0.7934197568313394 0.9049898664114228 0.9478182914690403 0.9850012816359663 1.0594094015034727 0.7871777253659913 1.0221111513254726 0.8653114358012173 0.9553701778102407 1.0 11.281750013695518 AVSLDSPVSVGSS(ph)PPVK ddPTM_A549_MK2206_60min_R1 1 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVSLDSPVSVGS(0.107)S(0.893)PPVK 216.54 2.6625999999999993e-55 12013000.0 2893.5 3021.1 2442.8 2388.3 3604.8 2736.6 2527.3 2908.9 4308.0 4519.3 4075.0 True False 3381.8520607169576 3174.8610858385828 2789.2257721083106 2973.433607214862 3074.5386952496865 3026.1851955919374 2986.4776960989184 3321.245483132633 3332.2448784623703 3498.3869912098353 3063.0650357214463 1.1040745205465177 1.036498098738803 0.9105995921014984 0.9707379936562551 1.0037458099630385 0.9879598246529484 0.9749965022846833 1.0842882682542774 1.0878792450051664 1.1421197233528073 1.0 11.580760283566548 -8.24827419563276 24.823090567197433 1.0458672810610714 0.9952068595413985 0.24800160885527678 0.05757024197324104 1041.112717499385 1963029.7204581148 0.009024982559117154 0.011615747578931735 5.645804094672273e-09 8.24827419563276 -0.05066042151967287 AVSPPHLDGPPS(ph)PR ddPTM_A549_MK2206_60min_R1 1 AVSPPHLDGPPSPR 14 0 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 1 AVSPPHLDGPPS(1)PR 83.758 8.8857e-05 5836700.0 1410.1 1533.0 1450.2 1225.9 1801.6 1430.6 1251.8 1607.7 2183.3 2073.1 1867.9 True False 1648.090406364949 1611.0231520275877 1655.860166493971 1526.2455550327427 1536.5870265650894 1581.985142444577 1479.235856438344 1835.5963983747565 1688.7860360136706 1604.7852701695203 1404.048878582598 1.173812700900209 1.1474124416907283 1.1793465254326325 1.0870316399337205 1.0943971039785239 1.1267308186888816 1.053550114246484 1.3073593279942008 1.202797183042885 1.142969660564501 1.0 10.455377445134523 -10.865621724165404 1.1606685464585766 1.0015233050232546 1.1538628806698623 0.039236159248803415 0.0763766324995084 0.37491358242719813 0.9109707533761245 0.0446407380331875 0.01128540567922493 1.3626310341155604e-11 10.865621724165404 0.15233957564660772 AVSPPHLDGPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AVSPPHLDGPPSPR 14 0 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 1 AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR 142.39 1.818e-13 19107800.0 1618.06 1752.0 1941.36 2270.88 2188.2799999999997 1564.2800000000002 1739.49 2065.7 1930.7 1762.96 2375.5 True False 1782.3242600471854 1899.6471886445352 2073.112363946041 2411.1471000573247 2034.5827619561721 1551.5410223153817 1805.687243835452 2024.497992989699 1849.5593931901064 1651.6464047313636 2083.3285595351995 0.8555176051754556 0.9118327399439844 0.9950962148805574 1.1573532600135157 0.9766019635472656 0.7447413972290275 0.8667318630904332 0.9717612633512662 0.8877905430350131 0.7927920908931685 1.0 11.024674667887119 -5.428899452059505 3.975708557987656 0.9473949369829049 0.8591870157329695 0.025903942407996983 0.10692588556965056 0.5449583604118265 14.376910235135576 0.01403126457645057 0.09715157410888074 3.724779324339166e-06 5.428899452059505 -0.08820792124993537 AVSPS(ph)NPK ddPTM_A549_PD325901_60min_R1 1 AVSPSNPK 8 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AVS(0.379)PS(0.621)NPK 46.461999999999996 0.039591 1761900.0 2202.1 2297.3 2095.8 2407.5 2474.2 2672.2 2958.8 2264.0 2661.7 2587.7 2793.2 True False 2425.6555708996616 2490.9015333750503 2238.033591069206 2556.205807170794 2300.420727526626 2650.4384891650852 3071.398753117487 2218.8427439263587 2549.838005311082 2424.312180380356 2449.6541075536584 0.9902032958122554 1.016838061216154 0.9136120826887733 1.0434966305196218 0.939079815567895 1.081964380600631 1.2538091576466412 0.9057779778314095 1.0408971607250592 0.9896548957278667 1.0 11.258362338973152 -7.258136779131671 24.982969320862686 1.0337581366888962 0.9824242482654156 0.1146200965312032 0.08626039062475108 630.5498504289338 4769884.004416939 0.012460696155873044 0.021002153833796618 5.5190359230373485e-08 7.258136779131671 -0.05133388842348052 AVSPT(ph)EPTPR ddPTM_A549_PD325901_60min_R1 1 AVSPTEPTPR 10 0 H3BMH3;Q6PJI9-3;Q6PJI9;Q6PJI9-2 H3BMH3 WDR59 WD repeat-containing protein 59 1 AVS(0.106)PT(0.894)EPTPR 178.84 3.9438e-11 15906000.0 1964.6 2015.5 2013.2 2206.7 2368.8 2154.0 1793.1 2150.6 2259.6 1964.3 2397.9 True False 2164.0447457379196 2185.353258397865 2149.8278583550555 2343.002847220682 2202.4236599163646 2136.458538156424 1861.337401721969 2107.7045958869385 2164.636869970665 1840.273762770465 2102.973501540499 1.029040424975723 1.0391729885312486 1.0222800509755516 1.1141380742574043 1.0472902574868466 1.0159227097209718 0.8850978865679842 1.0022497165765398 1.0293219902129036 0.875081764664368 1.0 11.038214956207307 -7.304157024574203 4.978548766854953 1.0023944328310903 1.0518661105535123 0.2408240345053113 0.05740097188259288 0.25038249946523383 15.09650127099638 0.006778468883480811 0.01109843150042324 4.964128047722233e-08 7.304157024574203 0.049471677722422 AVSRLS(ph)R ddPTM_A549_MK2206_60min_R1 1 AVSRLSR 7 1 O43665 O43665 RGS10 Regulator of G-protein signaling 10 1 AVSRLS(1)R 52.937 0.012858000000000001 18962000.0 2018.4 2516.7 1444.1 1124.3 2351.4 1968.9 1330.4 1662.9 2069.0 2495.9 1852.4 True False 2359.056574857822 2644.7892803051736 1648.8950947689586 1399.7535504717446 2005.5121748807446 2177.247691149955 1572.1164590234655 1898.6211674176664 1600.3748035140763 1932.074456522168 1392.3979563608366 1.6942401876425033 1.8994492689558236 1.1842125214536379 1.0052826809155426 1.4403297316827008 1.5636676865286394 1.1290712197914596 1.3635621617686742 1.1493659526022337 1.3875878283905463 1.0 10.443355886377077 -2.0000000000000004 0.1842022536054046 0.9935037332368191 4.192502703848057 0.2641149502711476 0.23614757410326398 32.572882603281194 0.3465439247495301 0.21537451737658672 29.69539677680661 0.00999999999999999 2.0000000000000004 3.198998970611238 AVSRLS(ph)R ddPTM_A549_PD325901_60min_R1 2 AVSRLSR 7 1 O43665 O43665 RGS10 Regulator of G-protein signaling 10 1 AVSRLS(1)R;AVS(0.003)RLS(0.997)R 66.50399999999999 0.0067542 93144000.0 5661.9 6575.0 5564.200000000001 4302.5 6912.8 5505.200000000001 6011.7 4859.2 4844.7 5422.1 6113.8 True False 6236.691919929515 7129.098324964508 5941.820072252736 4568.255653313537 6427.268775865349 5460.367476443243 6240.478533228465 4762.279444031345 4641.094106898074 5079.747680658627 5361.841358571377 1.1631623360060088 1.329598891166001 1.1081678242408668 0.8519938110460461 1.1987055091793777 1.0183754257694257 1.1638685510999889 0.8881798482191982 0.8655784079621965 0.9473886564245699 1.0 12.388512819426772 -5.737557681820718 0.4213807806644377 0.9391999105931279 1.3876829407708682 0.3593160035332219 0.11893246665952419 2.738475918173231 0.4186064912258877 0.029915662157058952 0.5701837976918503 1.8299630394187188e-06 5.737557681820718 0.44848303017774027 AVSTVVVTT(ph)APSPK ddPTM_A549_MK2206_60min_R1 2 AVSTVVVTTAPSPK 14 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 AVSTVVVT(0.119)T(0.746)APS(0.135)PK;AVSTVVVT(0.011)T(0.897)APS(0.091)PK 212.24 2.7162e-38 17017100.0 5647.6 7135.3 6799.1 6215.299999999999 9268.3 7972.3 6395.7 6987.299999999999 9684.3 9335.6 9164.3 True False 6600.7768094366975 7498.456292669566 7763.314617300487 7738.04877901542 7904.945347642769 8815.923494415554 7557.71590271826 7977.771172708797 7490.821512649287 7226.681476144211 6888.551388187 0.9582242241461971 1.0885389206108669 1.1269879804647456 1.1233201790851415 1.1475482873218825 1.2797935295269416 1.0971415435295717 1.1581202960015182 1.0874305917925073 1.0490858046783336 1.0 12.749984911305843 -9.79498465415101 0.8856291708554281 1.0115517901765279 1.1255033726652337 0.1947028193585233 0.07270418486423678 0.4872226606466638 0.7927315505630798 0.026217266781571737 0.014906236035889628 1.603302042564213e-10 9.79498465415101 0.11395158248870585 AVSTVVVTT(ph)APSPK ddPTM_A549_PD325901_60min_R1 3 AVSTVVVTTAPSPK 14 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 AVSTVVVT(0.035)T(0.898)APS(0.068)PK;AVSTVVVT(0.009)T(0.954)APS(0.037)PK;AVSTVVVT(0.015)T(0.978)APS(0.006)PK 220.21 3.0515e-39 31354100.0 7811.8099999999995 7619.549999999999 8337.6 8956.4 10815.5 10165.0 9313.24 11373.800000000001 9733.0 9621.199999999999 8984.4 True False 8604.859200449426 8261.676219313049 8903.439674061747 9509.616486539773 10055.856591449436 10082.219610195012 9667.660444600479 11146.940636426512 9323.95585741923 9013.715790035738 7879.3757568040555 1.0920737208171467 1.0485191307419077 1.1299676457710985 1.20689973166059 1.2762250337872172 1.2795708595936348 1.2269576604786478 1.414698445724057 1.1833368714987023 1.143963185440439 1.0 12.94386562142028 -10.242907895374728 0.992914761271493 1.015406842410102 1.206822457720781 0.1637977548742906 0.10256128362463746 0.4129996209196282 0.8035383190435721 0.04490494610917057 0.01957214208053469 5.715998479921566e-11 10.242907895374728 0.19141561531067897 AVSTVVVTTAPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 AVSTVVVTTAPSPK 14 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 AVSTVVVT(0.008)T(0.259)APS(0.732)PK 82.259 0.00012026 3027700.0 800.93 953.21 1117.7 925.0 1307.7 1277.9 1001.9 823.95 1276.4 1037.5 1307.1 True False 882.2398239864967 1033.540351990786 1193.5538432761014 982.1351491725788 1215.8516633200907 1267.4932060863941 1040.0278527607168 807.5156708737295 1222.757346800566 971.992072939142 1146.334986389585 0.7696178119496608 0.9016041246773344 1.0411911504465492 0.8567610348052288 1.0606425501758874 1.1056918101037816 0.9072634658358586 0.7044325441178615 1.0666666910792588 0.847912769373339 1.0 10.162812980225237 -4.459847764064639 0.9462085533821294 1.0005670376913876 4.883739693575286e-13 0.06458399115084401 0.12157587116986414 8.191869538504797 1.8474048474657578 0.017463361490290888 12.120023782180992 3.468584155741302e-05 4.459847764064639 -1.0005670376908993 AVT(ph)FSPDLGPVPHEGLGEYNR ddPTM_A549_PD325901_60min_R1 1 AVTFSPDLGPVPHEGLGEYNR 21 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 AVT(0.5)FS(0.5)PDLGPVPHEGLGEYNR 90.694 2.3216999999999997e-06 2431600.0 928.57 1020.9 861.29 1152.0 1176.7 1247.4 1299.1 1236.1 1154.9 1190.2 1575.5 True False 1022.8377428228956 1106.9348258488612 919.7423187575129 1223.1564236181737 1094.0526513946245 1237.2415879741525 1348.5379613947964 1211.4450157983097 1106.363569272935 1115.0505688791975 1381.723487917367 0.7402622534589682 0.8011261555069263 0.6656486097256801 0.8852396549050512 0.7918028903479518 0.8954335645252813 0.9759825125556849 0.8767637131393682 0.8007127178105119 0.8069997931061315 1.0 10.432253215493814 -14.999999999999998 0.04848060573974786 1.669448377003788 0.46507083294872714 0.20075472951081685 0.08411382880395259 282.5797033768506 1.0465929220730987 25.89236168376653 6.343329190987858 1.000000000000004e-15 14.999999999999998 -1.2043775440550608 AVT(ph)PPVKDDNEDVFSAR ddPTM_A549_MK2206_60min_R1 1 AVTPPVKDDNEDVFSAR 17 1 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 AVT(1)PPVKDDNEDVFSAR 62.684 0.0012277000000000002 9790900.0 1695.4 2373.9 2017.4 2080.3 2683.6 1986.4 2075.3 1915.1 3182.9 2942.4 2935.0 True False 1981.5420714496402 2494.7213702532877 2303.49765541645 2589.9735933882166 2288.8459949434227 2196.599529534396 2452.3551468816886 2186.571289747774 2461.9782320468603 2277.70979641445 2206.158498120844 0.8981866321651292 1.1307987945463733 1.0441215612470807 1.1739743973945198 1.0374803065568545 0.9956671433196708 1.111595177305053 0.99112157699016 1.1159570965295185 1.0324325284672664 1.0 11.10732072755816 AVT(ph)PPVKDDNEDVFSAR ddPTM_A549_PD325901_60min_R1 3 AVTPPVKDDNEDVFSAR 17 1 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 AVT(0.999)PPVKDDNEDVFS(0.001)AR;AVT(0.985)PPVKDDNEDVFS(0.015)AR;AVT(1)PPVKDDNEDVFSAR 68.639 0.00018943 6196000.0 2370.5 2364.7 2510.9 1756.7 2569.3 2418.5 2041.6 2537.7 2166.4 2377.4 2314.2 True False 2611.151414930133 2563.981567915372 2681.304773268285 1865.2073692448316 2388.841231603815 2398.804537851119 2119.2942052063877 2487.083582712862 2075.3537418589362 2227.290558270377 2029.5680709224832 1.2865552293317797 1.2633139063672727 1.321120888568952 0.9190169060932526 1.1770195175163718 1.181928594669313 1.044209472729398 1.2254250637587278 1.0225593177151444 1.097420968619212 1.0 10.98695701293883 -2.0000000000501403 0.16746307059352325 0.9695369410848065 2.318150691758931 0.30824390902780263 0.10434368400308805 34.813069430674595 0.3500956578473958 0.12480997577249045 11.834939894371779 0.009999999998845476 2.0000000000501403 1.3486137506741247 AVT(ph)PSSEAK ddPTM_A549_MK2206_60min_R1 4 AVTPSSEAK 9 0 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 AVT(0.991)PS(0.008)S(0.001)EAK;AVT(0.987)PS(0.012)S(0.001)EAK;AVT(0.978)PS(0.019)S(0.003)EAK;AVT(0.874)PS(0.112)S(0.014)EAK 118.4 0.00017603 628602200.0 12831.300000000001 15642.5 13599.8 16691.100000000002 18565.8 12705.0 14226.0 13581.5 19463.9 20384.0 21035.1 True False 14996.909744834122 16438.63643548046 15528.45613865998 20780.420249291943 15834.79541396654 14049.43466710356 16810.680055673347 15506.719216599335 15055.357727461414 15779.24024269716 15811.504130774036 0.9484809048397576 1.0396630389822201 0.9820986042964023 1.314259546556793 1.0014730592990944 0.8885577583829645 1.0631929711832164 0.9807238507068093 0.9521774527547364 0.9979594674984729 1.0 13.94868699574607 -6.980729942758138 24.999836587144262 0.9774112773895273 1.074437493110073 0.1657059289509636 0.09532196965176705 306.896818990416 398147.8062657609 0.01309571539128925 0.024746322797092307 1.0453700593882613e-07 6.980729942758138 0.09702621572054582 AVT(ph)PSSEAK ddPTM_A549_PD325901_60min_R1 2 AVTPSSEAK 9 0 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 AVT(0.997)PS(0.002)S(0.001)EAK;AVT(0.942)PS(0.05)S(0.007)EAK 138.76 4.5148e-05 840210000.0 20204.1 19766.2 18914.7 22323.0 19917.3 18502.3 19553.1 20585.3 19240.9 18522.1 20986.5 True False 22255.20535852768 21431.96704348492 20198.365285331 23701.84101078863 18518.377558954835 18351.62340321801 20297.203920366876 20174.710042644547 18432.271885032118 17352.611444998645 18405.29354438453 1.2091741598610777 1.1644458151021357 1.0974215236840674 1.2877730503798501 1.0061441027440068 0.9970839834182978 1.102791643687724 1.0961362824229373 1.0014657924679402 0.9428054707822326 1.0 14.167833138869396 -6.708654562281861 0.4023844599690486 0.9958291814507781 1.2376643713206206 0.5163156502819095 0.0700927598352455 1.2367266983342176 0.2799823292659185 0.019942043374207102 0.12127382934152679 1.9558945552519354e-07 6.708654562281861 0.24183518986984243 AVT(ph)PSSEAKDSR ddPTM_A549_MK2206_60min_R1 1 AVTPSSEAKDSR 12 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 AVT(0.815)PS(0.084)S(0.084)EAKDS(0.017)R 69.45100000000001 0.013907 3918700.0 788.86 976.62 1281.6 966.7 1270.7 740.95 918.94 587.67 1411.1 1544.7 1761.2 True False 922.0002822247034 1026.3257865187106 1463.350151274771 1203.5415433968114 1083.7817132861112 819.3568371971958 1085.8995030479734 670.9740221638948 1091.4881030636604 1195.7511971592573 1323.8454333527873 0.6964561413258299 0.7752610392887221 1.1053784032541263 0.9091254258805027 0.8186618210717488 0.6189218292063617 0.8202615469222951 0.5068371316314305 0.8244830367389222 0.9032407915861319 1.0 10.370518973610276 -10.1411506889112 1.0750236436472675 0.9799471115406378 0.7922073243366551 0.146574840965621 0.14852897343906368 0.5501800007789815 1.270641788518856 0.05720592045173062 0.02850591433123725 7.225190647454376e-11 10.1411506889112 -0.18773978720398277 AVT(ph)PVPTK ddPTM_A549_MK2206_60min_R1 2 AVTPVPTK 8 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(0.987)PVPT(0.013)K;AVT(1)PVPTK 120.45 0.0012728 880020000.0 17197.7 16578.0 16615.1 15650.6 21823.1 16945.5 17946.0 18432.4 23946.7 22080.6 23760.1 True False 20100.251316603444 17421.749389636894 18971.37101938629 19484.99770258213 18612.950898885756 18738.661562487472 21206.55590321339 21045.249146857546 18522.81068502202 17092.57712435728 17859.811424600026 1.1254458873466853 0.975472191472316 1.0622380364697024 1.0909968330205089 1.0421695087579905 1.0492082540511554 1.1873896873291492 1.1783578586876853 1.037122411018785 0.957041298925141 1.0 14.12442922718492 -8.979293924620125 17.9971396245311 1.0163755975561273 1.0861497181299085 0.3016030678288609 0.06047425451829534 7.321649655495399 6364.691486440243 0.010792813468756598 0.011080358208070382 1.0488323528711453e-09 8.979293924620125 0.06977412057378118 AVT(ph)PVPTK ddPTM_A549_PD325901_60min_R1 4 AVTPVPTK 8 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(0.999)PVPT(0.001)K;AVT(0.994)PVPT(0.006)K;AVT(0.997)PVPT(0.003)K;AVT(0.946)PVPT(0.054)K 100.48 0.0025120999999999997 1383560000.0 52241.9 49663.9 46879.9 53721.0 56911.0 59535.9 51194.9 50856.2 52061.6 50647.0 63409.0 True False 57545.4592295459 53849.251148472176 50061.45192573969 57039.224160756865 52913.76769229155 59051.05936946472 53143.14993442418 49841.83319508291 49873.632001090824 47449.13977652893 55610.094982768846 1.0348023905979074 0.9683358959404353 0.9002223776321828 1.0256990961520718 0.9515137082338598 1.0618766140889002 0.9556385392057132 0.896273117507293 0.8968449346569989 0.8532468752522605 1.0 15.763059180836144 -7.9813842378780935 24.98719786271814 0.9448557004920168 0.9871098504152277 0.23146886311268633 0.05610147339915102 420.9896292350642 565075.9869115048 0.008749571746057847 0.012088315772769025 1.0437963217904e-08 7.9813842378780935 0.04225414992321086 AVT(ph)PVPTKTEEVSNLK ddPTM_A549_MK2206_60min_R1 4 AVTPVPTKTEEVSNLK 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(1)PVPTKTEEVSNLK;AVT(0.998)PVPT(0.002)KTEEVSNLK;AVT(0.996)PVPT(0.004)KTEEVSNLK;AVT(0.99)PVPT(0.01)KTEEVSNLK 181.14 2.4190999999999997e-34 1903219500.0 16675.8 19974.8 19414.9 16939.7 24383.8 18428.1 19129.399999999998 16953.6 26514.2 27138.600000000002 28087.5 True False 19490.267355833363 20991.432000731023 22168.22475966335 21089.927260452023 20796.975321024544 20378.149310417237 22604.96436503567 19356.824718222484 20508.77603447701 21007.971411423736 21112.598574435848 0.9231581459343957 0.9942609350868093 1.0499998226890794 0.9989261713140667 0.9850504781636176 0.9652127490877453 1.07068603068155 0.9168376242259757 0.9713998948149388 0.995044325659713 1.0 14.365816538515377 -8.279705932048804 24.87238088396938 0.9808927810129955 0.9982820551227777 0.07108364735017669 0.042216363821107744 2355.1118554765744 3206791.164776261 0.0067689726143636735 0.008195215997556791 5.251629363661153e-09 8.279705932048804 0.017389274109782193 AVT(ph)PVPTKTEEVSNLK ddPTM_A549_PD325901_60min_R1 8 AVTPVPTKTEEVSNLK 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(0.999)PVPT(0.001)KTEEVSNLK;AVT(0.976)PVPT(0.023)KT(0.001)EEVSNLK;AVT(0.989)PVPT(0.011)KTEEVSNLK;AVT(0.975)PVPT(0.024)KT(0.001)EEVSNLK;AVT(0.994)PVPT(0.005)KT(0.002)EEVSNLK;AVT(0.996)PVPT(0.004)KTEEVSNLK;AVT(0.999)PVPT(0.001)KTEEVSNLK;AVT(0.96)PVPT(0.039)KT(0.001)EEVSNLK 193.64 1.2657e-35 3351722100.0 108042.09999999999 102184.09999999999 113171.70000000001 113822.5 120187.5 120646.4 125803.7 121901.8 110779.4 115925.1 127034.2 True False 119010.45445560971 110795.51272212999 120852.21211871678 120853.05731534693 111745.94462436596 119663.89571858637 130591.228645926 119470.3729688878 106123.72706374062 108605.56940209868 111409.79873614243 1.0682225065092192 0.9944862478796207 1.0847538860108463 1.084761472386908 1.0030172021854167 1.074087711099744 1.1721700436351379 1.0723506758309083 0.9525529016983408 0.9748295987798601 1.0 16.76551660088809 -8.752978723428583 24.98115081045457 0.9775944254024354 1.0691608705604978 0.46143657853894915 0.044945178741311896 124.86490434090456 368678.8286824912 0.008087263868369965 0.009097320893092684 1.7661243429695995e-09 8.752978723428583 0.09156644515806245 AVT(ph)PVSQGSNSSSADPK ddPTM_A549_MK2206_60min_R1 1 AVTPVSQGSNSSSADPK 17 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 AVT(0.993)PVS(0.006)QGS(0.001)NSSSADPK 122.14 7.0426e-10 6759300.0 2721.7 2378.5 2536.8 2167.3 3271.6 2651.0 2332.5 2387.9 3439.3 3774.1 3347.2 True False 3181.0564208236897 2499.5554906051007 2896.5563855757177 2698.288597293795 2790.3519738623136 2931.527060408621 2756.285057630962 2726.3921376370495 2660.3040414335273 2921.5281887737137 2515.9978619795875 1.2643319252747036 0.9934648706889003 1.1512555035705423 1.0724526590697423 1.1090438573214305 1.1651548297032712 1.095503736025561 1.0836225971559148 1.0573554459781613 1.1611807120038866 1.0 11.296914980920324 -9.173797498329154 0.5722570965845617 1.0049580913664418 1.1211464765238717 0.0 0.07788333377854492 0.5506907156012761 0.4116962566053767 0.023133782820347296 0.01667513959581219 6.701970342553216e-10 9.173797498329154 0.11618838515742991 AVT(ph)PVSQGSNSSSADPK ddPTM_A549_PD325901_60min_R1 1 AVTPVSQGSNSSSADPK 17 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 AVT(0.999)PVS(0.001)QGSNSSSADPK 192.62 5.5823e-40 11621000.0 2844.1 2407.6 3048.9 3076.3 3758.5 3274.4 3082.2 3520.6 3667.6 4108.2 3377.9 True False 3132.8309382842385 2610.4969014729354 3255.8166885251007 3266.3160642157904 3494.515926121097 3247.734372023859 3199.494807644554 3450.3788711427305 3513.4635264225576 3848.8075508902025 2962.439714272342 1.05751719543557 0.8811983207273963 1.0990322175466853 1.1025763827292225 1.1796074395321317 1.0963039539258923 1.0800202252994842 1.164708552386606 1.1860033841348776 1.2992019828614731 1.0 11.532570080088922 -5.8132309848467445 14.209761581499505 1.1023107415740212 0.9693841272135073 0.3005232250148625 0.08644190241834494 1.3407197123721517 367.2023220282408 0.010814588313598663 0.033641354930436365 1.5373367714084786e-06 5.8132309848467445 -0.1329266143605139 AVT(ph)TPGK ddPTM_A549_PD325901_60min_R1 2 AVTTPGK 7 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.5)T(0.5)PGK;AVT(0.5)T(0.5)PGK 84.743 0.01475 516900000.0 10621.5 10226.6 9761.5 10099.0 11754.900000000001 9558.4 9548.3 10035.1 10392.3 11075.2 13428.1 True False 11699.786860864964 11088.431472255828 10423.974090668027 10722.792293506895 10929.27637620351 9480.559559477417 9911.665781530239 9834.942058116338 9955.547771196736 10375.909981894547 11776.528827739263 0.9934834815931894 0.9415704435875331 0.8851482676384799 0.9105223152215852 0.928055841926861 0.8050385387879526 0.8416457792030878 0.8351308099336049 0.8453720036541447 0.8810669199445595 1.0 13.523626742064717 -4.326817136867961 14.686646045727885 0.9086158711046051 0.8996438085113365 0.0 0.06248191902351692 0.0 0.0 0.010001325687695356 0.0 4.711756768868559e-05 4.326817136867961 -0.008972062593268548 AVT(ph)TPGKK ddPTM_A549_PD325901_60min_R1 1 AVTTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.57)T(0.43)PGKK 46.818999999999996 0.023988 2558400000.0 9418.9 8724.9 7660.8 7280.2 8271.6 6933.7 5512.5 6739.6 7918.1 9267.2 10597.0 True False 10375.099794172296 9460.177943039213 8180.707956132729 7729.881419466172 7690.631351470866 6877.234246060907 5722.281204055743 6605.17339088608 7585.329792934473 8682.06741044976 9293.636179917698 1.116366037288128 1.0179199787787465 0.8802483546547845 0.8317391890344717 0.8275158616698693 0.7399939176575138 0.6157203804061995 0.7107200306763648 0.8161853601849999 0.9341948880256948 1.0 13.182027453106356 -5.622671656827565 2.2565827465353046 0.8526297881069155 1.1161190605827742 0.44517163949499217 0.10443234875258166 0.34430164258457663 3.1046325104004118 0.018846191498865524 0.13294747070921117 2.384121274661061e-06 5.622671656827565 0.26348927247585874 AVTDFVIPECQKKS(ph)PISK ddPTM_A549_PD325901_60min_R1 1 AVTDFVIPECQKKSPISK 18 2 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 AVTDFVIPECQKKS(0.989)PIS(0.011)K 73.315 0.00011997 16726000.0 2191.6 2236.2 2842.0 2761.4 2463.7 2267.8 2771.1 2700.0 2210.6 2482.6 2693.2 True False 2414.089618629351 2424.6524219445832 3034.8752103343277 2931.965406405577 2290.65821130359 2249.331788686694 2876.5557269041055 2646.146381890976 2117.696169568577 2325.8482123168333 2361.9534736014293 1.0220733158424269 1.026545378240475 1.2849005047109794 1.2413307201750305 0.969815128411852 0.9523184151705523 1.217871460659226 1.1203211288731352 0.8965867419647277 0.9847138135072814 1.0 11.205764831079803 -8.752079277644949 24.984316645696207 0.9511659607649093 1.1066103418007427 0.26426272105607007 0.1066297556799826 185.79820875185013 495938.6808280091 0.019177444730538944 0.02160241116709432 1.769785865881362e-09 8.752079277644949 0.15544438103583336 AVTDFVIPECQKKSPIS(ph)K ddPTM_A549_MK2206_60min_R1 2 AVTDFVIPECQKKSPISK 18 2 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 AVTDFVIPECQKKS(0.491)PIS(0.509)K;AVT(0.001)DFVIPECQKKS(0.474)PIS(0.525)K 63.631 0.00053843 19351700.0 6047.0 6628.4 6046.6 5933.3 7369.6 6496.9 6130.1 6121.799999999999 9375.0 8217.7 8886.1 True False 7067.585765044222 6965.757247814523 6904.098802042783 7386.958766355954 6285.541602450088 7184.397645706814 7243.859820700348 6989.583897226218 7251.577468798684 6361.315862559484 6679.436126116404 1.058111138664859 1.0428660617890502 1.0336349763190271 1.1059255043211142 0.9410287760479961 1.0755994233728838 1.0845016980366147 1.046433226585871 1.085657132111081 0.9523731857674215 1.0 12.705510601075174 -11.038628713394388 1.3514901842628817 1.000159058111124 1.055448285245834 0.27685849467357815 0.04377800374469424 0.5599862396899443 1.8316925371092687 0.027881754139782767 0.006324847183942844 9.14895068403293e-12 11.038628713394388 0.05528922713471007 AVTDFVIPECQKKSPIS(ph)K ddPTM_A549_PD325901_60min_R1 1 AVTDFVIPECQKKSPISK 18 2 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 AVTDFVIPECQKKS(0.438)PIS(0.562)K 64.265 0.00051103 14809000.0 2462.5 2528.7 2771.2 2171.1 2676.5 2855.2 2328.5 2704.1 2501.9 2183.9 2856.6 True False 2712.4911872033126 2741.8024234734226 2959.2702965793424 2305.2039160741456 2488.511873423738 2831.948197838542 2417.112341704092 2650.164604174588 2396.7538435916126 2046.0081812932942 2505.2563094793736 1.082720030257904 1.094419925457929 1.1812245658785783 0.920146935605642 0.993316278261718 1.1304025808149982 0.9648163872727262 1.0578417043186006 0.9566900737951602 0.8166861704136303 1.0 11.290742495866407 -6.1308791755794 0.45064973785869555 0.9829727238513937 1.1500508159094587 0.27321387842574185 0.08467466387068469 2.373252249961893 0.5185166874989647 0.01570907200197499 0.18378517122542967 7.398110681649792e-07 6.1308791755794 0.167078092058065 AVTEQGAELSNEER ddPTM_A549_MK2206_60min_R1 2 AVTEQGAELSNEER 14 0 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 ; 210.91 8.1541e-38 12472500.0 5224.9 5016.9 5106.3 4867.6 6972.7 5789.4 5147.5 4990.799999999999 6887.1 7395.9 6952.200000000001 False True 6106.735383459487 5272.238781087541 5830.450122857654 6060.16221851487 5947.0250666798365 6402.030465307305 6082.734119680759 5698.261183683982 5327.182846438765 5725.16105332437 5225.77686904114 1.1685794354591321 1.008890910042802 1.1157097344509206 1.1596672361609706 1.138017411709933 1.2250868389032445 1.1639865750327871 1.090414176969928 1.0194049573755015 1.095561712028256 1.0 12.351429810238468 -8.650766625066293 2.8227441600965903 1.008230402927173 1.1377234039760504 0.3564673515857848 0.05617657543256778 0.1433397622494036 2.2817765825127685 0.009158704750092665 0.010310810961159192 2.2347727903481843e-09 8.650766625066293 0.1294930010488775 AVTEQGAELSNEER ddPTM_A549_PD325901_60min_R1 1 AVTEQGAELSNEER 14 0 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 199.31 6.5406e-31 10890000.0 6199.9 7135.1 6962.4 8217.3 8546.8 8663.8 7355.9 7418.9 8679.0 10151.0 16826.0 False True 6829.309283874846 7736.399917635631 7434.910332312363 8724.863958157657 7946.502252859332 8593.24488527374 7635.832799802931 7270.924219485542 8314.251812035502 9510.0641276195 14756.508668802047 0.46279980157591427 0.5242703468193525 0.5038393904129315 0.5912552998802225 0.5385082902204156 0.5823359087262577 0.5174552444065902 0.492726591545167 0.5634294668638895 0.644465729737652 1.0 13.849063805418169 -10.540315583787283 0.5975002632569486 1.0488083751105988 0.5227032132238378 0.3871646363343152 0.10987687290336173 0.15818579437076677 0.08850968077205641 0.04377596829766313 0.008941746220750528 2.8819365582977727e-11 10.540315583787283 -0.5261051618867609 AVTFS(ph)PDLGPVPHEGLGEYNR ddPTM_A549_PD325901_60min_R1 1 AVTFSPDLGPVPHEGLGEYNR 21 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 AVT(0.03)FS(0.97)PDLGPVPHEGLGEYNR 86.211 5.3039999999999995e-06 2351900.0 844.11 684.0 986.79 1231.6 1233.7 1449.0 1291.7 1251.5 1573.3 1296.8 1269.1 True False 929.8034257990613 741.6430804982085 1053.7595034503206 1307.673134833458 1147.0491680339492 1437.1998244144193 1340.856350345361 1226.537850717243 1507.1796722981271 1214.9198266867272 1113.0087454877382 0.8353963340976325 0.6663407484486644 0.9467665979466733 1.1748992450732405 1.0305841465165613 1.2912745117601168 1.2047132206115563 1.1020019884747216 1.3541489933555346 1.0915635942773567 1.0 10.120249213390675 -6.054397897942771 2.878147576620376 1.1685135757806777 0.7510863478037482 0.6846734674954585 0.10701282513120329 0.1349806503832957 2.1921768403103004 0.019266212041194216 0.06392846769833913 8.822711985461236e-07 6.054397897942771 -0.41742722797692955 AVTIANS(ph)PSKPSEK ddPTM_A549_MK2206_60min_R1 6 AVTIANSPSKPSEK 14 1 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVTIANS(0.892)PS(0.108)KPSEK;AVTIANS(0.968)PS(0.031)KPS(0.001)EK;AVT(0.007)IANS(0.949)PS(0.043)KPS(0.001)EK;AVTIANS(0.854)PS(0.146)KPSEK;AVTIANS(0.5)PS(0.5)KPSEK;AVTIANS(0.495)PS(0.495)KPS(0.009)EK 177.6 1.3400000000000002e-23 583455200.0 37356.600000000006 38408.170000000006 36729.399999999994 33912.700000000004 46974.600000000006 36393.0 38490.2 41409.99999999999 48352.2 45807.2 47119.700000000004 True False 43661.48079881773 40362.981798441884 41938.18121584861 42221.31302239895 40064.69856687633 40244.083104281744 45483.37111478125 47279.99431280632 37400.50390259707 35459.32170551795 35418.578052437726 1.2327282234249004 1.1395991600420519 1.1840729786994417 1.1920668571135091 1.1311774997731403 1.1362422016123794 1.2841670562675456 1.334892503104094 1.0559572393681382 1.001150346945603 1.0 15.112218673009254 -8.929182210465466 8.996959397188087 1.0245707489605136 1.1991621953764289 0.6520422512843241 0.060562762408778656 0.1465016098931488 17.134592889043727 0.011207295173779943 0.011898427685072236 1.1771120065574026e-09 8.929182210465466 0.17459144641591529 AVTIANS(ph)PSKPSEK ddPTM_A549_PD325901_60min_R1 4 AVTIANSPSKPSEK 14 1 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVT(0.001)IANS(0.836)PS(0.163)KPS(0.001)EK;AVTIANS(0.876)PS(0.11)KPS(0.014)EK;AVTIANS(0.931)PS(0.069)KPSEK;AVTIANS(0.855)PS(0.142)KPS(0.003)EK 196.58 2.5964999999999997e-31 684707400.0 32992.9 31688.600000000002 35665.2 31544.3 37448.3 29510.1 33777.700000000004 33167.2 31002.700000000004 31382.9 33529.6 True False 36342.31491991075 34359.109533151364 38085.654944270194 33492.719768696836 34818.060597621596 29269.779529642463 35063.12885736669 32505.65417683494 29699.764333793413 29401.378338160794 29405.67176164655 1.235894735358897 1.1684517807195793 1.295180577848415 1.1389884250963098 1.1840593501772796 0.9953787067642736 1.1923933974907213 1.1054212411916962 1.0100012193066252 0.9998539933547325 1.0 14.843806828257971 -7.518653646713819 0.41946779431254183 0.9917883488435083 1.2516631985127744 0.6237696912722526 0.06212638955926283 0.5483913722949665 0.1901710302862763 0.020086855938153587 0.05490626838334376 3.029328378357184e-08 7.518653646713819 0.2598748496692661 AVTIANS(ph)PSKPSEKDSVVSLESQK ddPTM_A549_MK2206_60min_R1 4 AVTIANSPSKPSEKDSVVSLESQK 24 2 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVTIANS(0.5)PS(0.5)KPSEKDSVVSLESQK;AVTIANS(0.427)PS(0.427)KPS(0.145)EKDSVVSLESQK;AVTIANS(0.5)PS(0.5)KPSEKDSVVSLESQK;AVTIANS(0.5)PS(0.5)KPSEKDSVVSLESQK 220.62 7.489799999999999e-76 725734000.0 18871.699999999997 18666.1 20524.600000000002 17177.8 25539.600000000002 19939.100000000002 19904.8 17560.600000000002 26434.0 27033.4 27321.199999999997 True False 22056.781591232822 19616.12476064067 23435.296906097214 21386.36177114074 21782.75867210355 22049.04232749661 23521.244508095508 20049.868827082013 20446.741206423932 20926.536164488305 20536.592013239926 1.0740234590536166 0.955179162540414 1.1411482923256446 1.0413783239864223 1.060680304602644 1.0736466066658776 1.1453333879804097 0.976299710008159 0.9956248433645628 1.0189877731902637 1.0 14.325909170089183 -8.301740567744167 24.99906225885654 0.9962536535222841 1.0671616333403755 0.33963841074798873 0.04847706877558544 422.12559471182027 261845.8904668048 0.007406377473170246 0.008953910700179287 4.9918259254438226e-09 8.301740567744167 0.07090797981809138 AVTIANS(ph)PSKPSEKDSVVSLESQK ddPTM_A549_PD325901_60min_R1 4 AVTIANSPSKPSEKDSVVSLESQK 24 2 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVTIANS(0.865)PS(0.132)KPS(0.003)EKDSVVSLESQK;AVTIANS(0.882)PS(0.118)KPSEKDSVVSLESQK;AVTIANS(0.876)PS(0.124)KPSEKDSVVSLESQK;AVTIANS(0.5)PS(0.5)KPS(0.001)EKDSVVSLESQK 276.39 2.1918999999999993e-140 806514000.0 28953.9 26947.8 28075.100000000002 26660.5 31951.0 32046.5 32154.100000000002 32834.4 29200.8 29346.8 31807.399999999998 True False 31893.278613265367 29218.78567931234 29980.4451152911 28307.258534611385 29706.87198496614 31785.523928983202 33377.74187089865 32179.492133911484 27973.591924517365 27493.83803964379 27895.29144372128 1.1433212188375956 1.0474450764660843 1.074749305838106 1.0147683379369328 1.0649421621889028 1.139458391861955 1.1965367681581034 1.1535814995456697 1.0028069425606847 0.9856085603232567 1.0 14.767734003966982 -8.78286372108449 24.26974299516811 1.0013254692955356 1.101410269590647 0.4784583995023094 0.050168668110186304 120.12233169728314 136075.2726275723 0.009491759735319816 0.010109811522480907 1.6486796558171955e-09 8.78286372108449 0.10008480029511135 AVTIANSPS(ph)KPSEKDSVVSLESQK ddPTM_A549_PD325901_60min_R1 1 AVTIANSPSKPSEKDSVVSLESQK 24 2 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVTIANS(0.39)PS(0.609)KPSEKDSVVSLESQK 226.5 6.356299999999999e-89 694040000.0 11573.0 11632.0 10761.0 10748.0 12561.0 13332.0 13745.0 13368.0 11991.0 12556.0 12642.0 True False 12747.882440407697 12612.26946250755 11491.30617114979 11411.879549520945 11678.758693097543 13223.428612210511 14268.073496552603 13101.364753006872 11487.05996982575 11763.212017179638 11087.114144240779 1.1497926579054485 1.1375610730100596 1.0364560174677169 1.0292921495219625 1.053363259470373 1.1926844479254726 1.2869059803054503 1.1816749230287666 1.0360730322049334 1.0609805098191452 1.0 13.436596276014736 -8.888831330396401 5.800763979980061 1.0157000801477338 1.131106966327873 0.27018917669443854 0.07309284040100829 0.19545984472620595 9.220146074064797 0.014228239178949045 0.015061873166505969 1.2917208497322752e-09 8.888831330396401 0.11540688618013917 AVTPS(ph)SEAKDSR ddPTM_A549_MK2206_60min_R1 2 AVTPSSEAKDSR 12 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 AVT(0.303)PS(0.621)S(0.076)EAKDSR;AVT(0.306)PS(0.57)S(0.123)EAKDSR 77.42 0.00029939999999999996 32539000.0 5049.5 7238.7 7459.2 6243.799999999999 8273.4 5441.1 4385.0 3580.5 11091.3 11599.6 11118.0 True False 5901.732151577773 7607.118911012458 8517.026723149791 7773.531280294831 7056.393819706706 6016.8735904901305 5181.69773964063 4088.0468398213716 8579.138259166595 8979.242303727928 8357.09375881007 0.706194320885314 0.9102588926913754 1.0191373902166792 0.9301716008749997 0.8443597766589418 0.7199720099044152 0.6200358508815426 0.48917087181315183 1.0265695834897683 1.074445562401641 1.0 13.028785606309167 AVTSGLPGDTALLLPPS(ph)PRPSPR ddPTM_A549_MK2206_60min_R1 2 AVTSGLPGDTALLLPPSPRPSPR 23 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3 H7BYY2 BCOR BCL-6 corepressor 1 AVTSGLPGDTALLLPPS(0.947)PRPS(0.053)PR;AVTSGLPGDTALLLPPS(0.974)PRPS(0.026)PR 85.98200000000001 2.4912999999999998e-06 7945400.0 1321.12 1407.32 1244.3700000000001 1255.41 1999.75 1521.68 1529.97 1257.3600000000001 2056.79 2127.1000000000004 2043.87 True False 1544.0927577170862 1478.946576850271 1420.840377451458 1562.9855063574962 1705.5894240528073 1682.7031675905648 1807.9457447475431 1435.594630503505 1590.9303490187128 1646.5866326648918 1536.3206710576655 1.005058896105375 0.9626548706345949 0.924833209770779 1.017356295337401 1.1101780091773485 1.0952812126338987 1.1768023296222916 0.9344368383165628 1.0355457548608338 1.0717727514082815 1.0 10.585263661046437 -6.470441488916107 9.141615433473808 1.0356158025655182 0.9650357830164954 0.25377338242024383 0.06402470003702808 0.6108606544692325 102.44546151391539 0.009333972843720832 0.021646665026863007 3.3849987378205814e-07 6.470441488916107 -0.07058001954902282 AVTT(ph)PGK ddPTM_A549_MK2206_60min_R1 2 AVTTPGK 7 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.306)T(0.694)PGK;AVT(0.094)T(0.906)PGK 98.009 0.01226 390180000.0 8805.9 9878.599999999999 8960.3 5928.1 13453.4 10105.0 9887.1 10013.599999999999 14940.3 14372.0 15564.9 True False 10292.12063641523 10381.378545087879 10231.005275021325 7380.484766122522 11474.422681611219 11174.30439284387 11683.458089304639 11433.058465363847 11556.345904756576 11125.355218212506 11699.70576061368 0.8796905535063114 0.8873196264504474 0.8744668869761971 0.6308265282165008 0.9807445517338681 0.9550927708337297 0.9986112752199514 0.9772090597228962 0.9877467127130909 0.950908975477427 1.0 13.514184627046903 -6.950288803091558 24.999996873858986 0.9896770041675675 0.8243914721631511 0.5637755885807365 0.06744524115045233 55.98635225945004 28155.517017072107 0.00908792392206423 0.01717455977082882 1.1212725671385546e-07 6.950288803091558 -0.16528553200441642 AVTT(ph)PGKK ddPTM_A549_MK2206_60min_R1 3 AVTTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.053)T(0.947)PGKK;AVT(0.011)T(0.989)PGKK;AVT(0.04)T(0.96)PGKK 88.948 0.0082243 3900824000.0 23090.2 18381.3 16272.9 12564.5 30112.3 26147.3 25339.8 26849.0 32142.3 28770.4 31353.2 True False 26987.26125880999 19316.82965711982 18580.641913763437 15642.803064041836 25682.820559522617 28914.18993082698 29943.713656316006 30654.92797161402 24862.120370705914 22271.146658089416 23567.33513570103 1.1451129753710796 0.819644204399575 0.7884065723500707 0.6637493366971857 1.0897634548683843 1.2268756634697426 1.2705600138454223 1.3007379831068102 1.054939823596919 0.9450006345584623 1.0 14.524501015360148 -6.795810920321846 24.64395202521923 1.0855943480728452 0.8470564310762838 0.40966658346454154 0.15229756243855935 136.90091295417525 98155.80901325561 0.023435037527874247 0.0442897672354724 1.600254583089143e-07 6.795810920321846 -0.23853791699656135 AVTT(ph)PGKK ddPTM_A549_PD325901_60min_R1 3 AVTTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.019)T(0.981)PGKK;AVT(0.004)T(0.996)PGKK;AVT(0.053)T(0.947)PGKK 129.85 0.0032890999999999997 2950837000.0 22828.300000000003 21092.1 20016.1 18596.2 21196.5 17755.0 14383.8 17509.3 18683.0 23209.2 29218.3 True False 25145.812210693763 22869.60528973138 21374.51291258723 19744.84503896552 19707.730963955255 17610.409166651494 14931.18338011738 17160.06327571987 17897.818481882616 21743.767151093136 25624.63433006412 0.9813139921060813 0.8924851373547055 0.8341392363796414 0.7705415337693177 0.7690931589542 0.6872452866962503 0.5826886420228584 0.6696705621116635 0.698461420028304 0.848549363515492 1.0 14.645243796695642 -5.525100954639126 1.7917929940600037 0.7987062737406707 0.9951151624238496 0.24615244519179702 0.10907808878598622 0.9125244347534391 4.238575696676393 0.021590221726614695 0.2529906971977378 2.984688727536951e-06 5.525100954639126 0.19640888868317885 AVTTPGKK ddPTM_A549_MK2206_60min_R1 2 AVTTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 60.59 0.011347 11670700.0 6874.8 6021.9 6657.799999999999 4479.4 7307.4 7129.2 6655.1 5693.2 9147.9 9738.3 8820.2 False True 8035.098167277329 6328.388988385475 7601.976152588309 5576.853201087905 6232.49114005425 7883.6072120200415 7864.245524990277 6500.228534693768 7075.915256194506 7538.411266456913 6629.900914863873 1.2119484545030048 0.9545224083511679 1.1466198741439855 0.8411669001847233 0.9400579616629484 1.1890987984971884 1.1861784400667392 0.9804412793139355 1.0672731534087776 1.1370322668859514 1.0 12.694771593807987 -10.84276599959422 0.98862105073226 0.9987110645625266 1.0536509741784332 0.0 0.12104814310622697 2.1918809008250832 3.6489792154035228 0.08787782222722382 0.019516101428246488 1.4362630918595105e-11 10.84276599959422 0.05493990961590667 AVTTPGKK ddPTM_A549_PD325901_60min_R1 2 AVTTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 75.38 0.0048997 18115300.0 8938.3 8195.1 7060.8 7216.900000000001 9654.3 7674.6 6966.1 7191.299999999999 8968.6 9314.400000000001 9581.9 False True 9845.709635971321 8885.729837705947 7539.988348039626 7662.6715222308985 8976.215273526917 7612.10060210552 7231.198747496189 7047.863880034287 8591.680931146626 8726.287194394548 8403.387044668627 1.1716358634483877 1.0573986168283578 0.897255869325123 0.9118551224047616 1.0681663507599248 0.9058372013145433 0.8605100192408595 0.8386932367354987 1.0224069039634986 1.038425000301608 1.0 13.036755218226185 -5.452641882800449 3.7041971559133087 0.9738476465641207 1.1641485440210886 0.4202891849953607 0.07520913145821832 0.20548382772861976 5.0751796549768216 0.011139642841089275 0.07726215530364619 3.5266155424703143e-06 5.452641882800449 0.19030089745696788 AVTTVTQSTPVPGPS(ph)VPPPEELQVSPGPR ddPTM_A549_MK2206_60min_R1 1 AVTTVTQSTPVPGPSVPPPEELQVSPGPR 29 0 P51610;P51610-2;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AVTTVTQS(0.001)T(0.006)PVPGPS(0.914)VPPPEELQVS(0.079)PGPR 68.689 0.00011541 30037000.0 1543.6 1451.4 1352.7 1202.4 1998.7 2019.0 1621.7 1314.6 2162.2 2278.5 1955.0 True False 1804.1219426033158 1525.2700605693678 1544.5332003974588 1496.988053977787 1704.6938776618802 2232.649239896266 1916.3418983751899 1500.948575793653 1672.4651523238947 1763.785267513025 1469.51954474489 1.2276950987518258 1.0379379206107504 1.051046381738047 1.0186921700572997 1.160034845237677 1.5193055770373276 1.3040601639006228 1.0213872834567974 1.1381033741978819 1.2002462123218782 1.0 10.52112883175546 -10.09574287132354 0.7409512409339484 1.0072989258984386 1.1663857573591583 0.0 0.15217299321199773 1.003447455162295 1.0855751937816773 0.08113470637827484 0.0320085195798658 8.021528459650819e-11 10.09574287132354 0.15908683146071967 AVTTVTQSTPVPGPSVPPPEELQVS(ph)PGPR ddPTM_A549_MK2206_60min_R1 1 AVTTVTQSTPVPGPSVPPPEELQVSPGPR 29 0 P51610;P51610-2;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AVTTVTQST(0.001)PVPGPS(0.059)VPPPEELQVS(0.94)PGPR 74.146 3.5987e-06 31111000.0 1289.9 1260.1 1221.6 1204.4 1769.3 1111.5 1274.5 1282.5 1807.0 1684.8 1471.8 True False 1507.603584972803 1324.2337076777312 1394.8412490615337 1499.4780540675704 1509.038313777538 1229.1181922460132 1506.0601526047844 1464.2983024915266 1397.7173851860498 1304.2025098555825 1106.3114403864597 1.3627298154362055 1.1969809398474143 1.2608034212990549 1.3553851106735086 1.3640266734025608 1.111005587917137 1.361334699818962 1.323585971397 1.2634031739722364 1.178874647992427 1.0 10.11154186395214 -10.460084357776658 0.6441761195514006 0.9822376071756067 1.2911119272800906 0.35925940330244555 0.09175695662879235 0.40001675906978473 0.27821276097894215 0.06630125116326438 0.01587013876488036 3.4666950649486435e-11 10.460084357776658 0.3088743201044839 AVTTVTQSTPVPGPSVPPPEELQVS(ph)PGPR ddPTM_A549_PD325901_60min_R1 1 AVTTVTQSTPVPGPSVPPPEELQVSPGPR 29 0 P51610;P51610-2;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR 162.34 1.7843999999999998e-46 51173000.0 1963.4 1556.2 2617.8 2304.3 2105.0 1945.9 1911.7 2626.3 2249.7 2241.9 2979.3 True False 2162.7229226213135 1687.3464354843752 2795.459650110205 2446.6313775549997 1957.15206185577 1930.0532355610899 1984.4507896223793 2573.916386207506 2155.1529325424895 2100.3460513949526 2612.8649873387576 0.8277208861159258 0.6457840124387609 1.0698829306742799 0.9363787985260312 0.7490444670274214 0.7386731595063694 0.7594922811697103 0.9850935270976549 0.8248236870201032 0.8038479070187958 1.0 11.351416863920418 -10.961530562289612 0.5173501227926761 1.0470671893379553 0.8312465058516934 0.0 0.12908865776165884 2.2449314632177577 0.7023900570719621 0.24985201996539935 0.027019629461744524 1.0926207342793597e-11 10.961530562289612 -0.21582068348626193 AVVGVVAGGGR ddPTM_A549_PD325901_60min_R1 2 AVVGVVAGGGR 11 0 P62917;E9PKZ0;E9PKU4;E9PP36 P62917 RPL8 60S ribosomal protein L8 0 ; 138.55 5.1548e-08 13369800.0 5373.9 6574.6 6562.6 6053.9 7248.6 6866.8 6447.9 6787.299999999999 6050.5 7134.2 7213.5 False True 5919.454371943914 7128.664615560703 7007.977500119658 6427.835653595543 6739.483342312461 6810.879057480282 6693.278362926265 6651.921976966152 5796.218526180524 6683.745394469814 6326.285230144032 0.9356919829884346 1.126832628663884 1.1077555382307835 1.0160521411471672 1.0653144929665181 1.076600059862495 1.0580108419761969 1.0514736112862093 0.9162120131040251 1.056503959483604 1.0 12.627142888073134 -8.694711456546926 8.229038065460818 0.9604871416722748 1.0590623364402902 0.13845229200727904 0.05812588299104834 0.18392707319523766 20.26932903431829 0.008836597626905716 0.01001029933381011 2.0197078034990774e-09 8.694711456546926 0.09857519476801546 AVVIVDDR ddPTM_A549_MK2206_60min_R1 2 AVVIVDDR 8 0 P23246;P23246-2;Q15233;Q15233-2;H7C367;C9IZL7 P23246;Q15233 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein 0 ; 124.83 0.0030734 10419700.0 2543.9 2771.8 3057.7 2269.0 3362.0 2583.5 2599.5 2638.7 3700.8999999999996 3242.0 3550.1000000000004 False True 2973.2481276163358 2912.8727806849765 3491.3278382903145 2824.905101859279 2867.45425361447 2856.884255211495 3071.7955015269827 3012.743805679837 2862.652059122886 2509.629948333211 2668.5121922244666 1.1141969432554257 1.091571846354133 1.3083424720574166 1.058606780995984 1.074551677886158 1.0705906697881722 1.1511266504524904 1.1289975794221196 1.072752100389163 0.9404603642605763 1.0 11.381819887564705 -9.979346071170625 0.2579352607164966 0.9537382343670554 1.1521104505713307 0.42501224934198734 0.06698438608286356 2.6335988649705313 0.34687318990731986 0.1737478623451838 0.05564683416768906 1.0487064251697342e-10 9.979346071170625 0.19837221620427525 AVVIVDDR ddPTM_A549_PD325901_60min_R1 2 AVVIVDDR 8 0 P23246;P23246-2;Q15233;Q15233-2;H7C367;C9IZL7 P23246;Q15233 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein 0 ; 113.89 0.0037061 9139400.0 3161.9 3621.5 3093.2 3508.4 3941.7999999999997 3183.8 3514.2000000000003 3949.2 3427.0 3948.0 4003.8 False True 3482.893760332245 3926.696514655355 3303.1231529226416 3725.105899845487 3664.9415664717662 3157.872188385525 3647.934804044029 3870.4301079125357 3282.975107713521 3698.7226062301042 3511.357982179344 0.9918936713398181 1.1182843032763718 0.9406967816116941 1.060873291402057 1.0437390847278691 0.8993307445188411 1.0388957271112294 1.1022601875273144 0.9349588177494578 1.053359590506483 1.0 11.777813370823086 -7.4476365572308705 0.5053322455220917 0.9750909965857627 1.03724531891603 0.0 0.07015974568103098 1.9183884168295013 0.9456232727489783 0.017533789471462172 0.0487532341067027 3.567495572257962e-08 7.4476365572308705 0.0621543223302673 AVVLMGK ddPTM_A549_PD325901_60min_R1 1 AVVLMGK 7 0 F8VWS0;P05388;P05388-2;F8VW21;F8VZS0;F8VU65;F8VWV4;F8VS58;F8VQY6;F8VPE8;F8VRK7;G3V210 F8VWS0 RPLP0 60S acidic ribosomal protein P0 0 55.395 0.024359 2255700.0 3248.0 2929.4 3051.9 2532.8 3470.4 2607.5 2365.5 2672.2 3778.1 3450.0 3189.1 False True 3577.734568948776 3176.270818730193 3259.0202865655638 2689.245303593846 3226.651076230053 2586.265384513869 2455.520396951268 2618.9008746996524 3619.3195956966592 3232.166411219316 2796.860917370532 1.2791964543994494 1.135655619842678 1.1652421707224292 0.961522715302604 1.1536687635020435 0.9247028940378434 0.8779558474648159 0.9363715079410567 1.2940649187158586 1.155640736779302 1.0 11.449592797750846 -5.173996537727537 1.44625730728019 1.0859054456666228 1.3818230925165293 0.19140825621970647 0.1251346117186329 2.5656504348937585 4.088331341142649 0.022160502557662724 1.155402706707445 6.698899498764638e-06 5.173996537727537 0.2959176468499065 AVVLPGGTAT(ph)SPK ddPTM_A549_MK2206_60min_R1 3 AVVLPGGTATSPK 13 0 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 AVVLPGGT(0.001)AT(0.499)S(0.499)PK;AVVLPGGT(0.001)AT(0.767)S(0.232)PK;AVVLPGGT(0.255)AT(0.373)S(0.373)PK 134.56 2.6901e-08 12252600.0 8545.400000000001 9487.9 8679.400000000001 8118.6 10779.099999999999 9474.7 8399.9 8409.0 12544.8 12068.3 13105.9 True False 9987.654605028756 9970.793583902516 9910.26943115968 10107.6573644578 9193.508668987422 10477.306465203157 9926.053099933255 9601.001501482453 9703.422829929139 9342.062648201636 9851.343325561156 1.0138368215341673 1.0121252761571535 1.0059815299955723 1.0260181815236902 0.9332238624892041 1.0635408917297422 1.007583714413673 0.9745880520244234 0.9849847385535524 0.9483034282199773 1.0 13.266104748011433 -8.046797470909903 23.600023482340102 0.991325260561683 1.0088605429294304 0.13565498722498226 0.032044583453395156 441.4491535434052 222622.55481292572 0.00440937767469318 0.005692594800022248 8.978473994595925e-09 8.046797470909903 0.017535282367747373 AVVLPGGTAT(ph)SPK ddPTM_A549_PD325901_60min_R1 2 AVVLPGGTATSPK 13 0 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 AVVLPGGTAT(0.697)S(0.303)PK;AVVLPGGT(0.001)AT(0.5)S(0.5)PK 156.36 2.4011000000000003e-18 25666000.0 6896.9 8254.2 7224.299999999999 7882.9 8628.3 7476.6 7596.1 9040.3 7405.8 7487.6 9273.599999999999 True False 7597.068210770565 8949.810402117417 7714.584441245001 8369.808829635156 8022.277974019069 7415.713048458826 7885.173742245416 8859.984124521847 7094.559980363229 7014.831658158186 8133.005990193901 0.9341033585774405 1.1004308140075576 0.9485526569815148 1.029116275055837 0.9863853517004243 0.9118046952627445 0.969527595547415 1.0893861550335109 0.8723170730376022 0.8625140159267168 1.0 12.989572961145841 -7.011420326551905 21.35540274530902 0.9514193210379074 1.0063184292935927 0.10750332978201671 0.07095597892350951 139.63043428523088 261108.08763903167 0.01038416849232729 0.0186920445038967 9.740464625289573e-08 7.011420326551905 0.054899108255685336 AVVLPGGTATS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AVVLPGGTATSPK 13 0 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 AVVLPGGT(0.034)AT(0.135)S(0.831)PK 67.456 0.0043684 1700100.0 2597.4 3022.1 3261.2 2938.1 3966.0 2979.8 2737.6 2851.3 4555.5 3275.4 4084.9 True False 3035.7776196669183 3175.9119815672375 3723.687198296883 3657.9346318963226 3382.6066537284332 3295.1204581688426 3234.986483931629 3255.4805067400303 3523.6865236386543 2535.4848651359057 3070.5065924953465 0.9886894973900041 1.0343283383040158 1.2127273093625597 1.191313068936805 1.1016444849836484 1.0731520545249689 1.0535676724610492 1.0602421485421267 1.1475912581496908 0.8257545746141395 1.0 11.584260985269443 -7.219321171895612 4.617817533127685 1.0693360505140663 1.1130314329996704 0.05200446144007986 0.09926214404598512 0.5259746268011837 26.218838755623377 0.011869028062923604 0.020593057694058656 6.035021590008085e-08 7.219321171895612 0.04369538248560412 AVVQLKPR ddPTM_A549_PD325901_60min_R1 2 AVVQLKPR 8 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 80.229 0.0039897 5523300.0 4301.2 4299.1 3874.8 3856.7 5270.799999999999 5528.1 4777.4 4299.1 4945.8 4945.6 5020.200000000001 False True 4737.854657623916 4661.400244692762 4137.7672290652545 4094.9195997987936 4900.597191272869 5483.080986435716 4959.206571293588 4213.351077921294 4737.945225482795 4633.3339719786245 4402.747225669799 1.0761132571954857 1.0587480965327536 0.9398148512684071 0.9300828300847602 1.1130771175552399 1.2453771941453131 1.1263891195886526 0.956982279917355 1.0761338279560215 1.052373378368036 1.0 12.104188302059537 -8.24589771621211 24.771010419145064 1.0310338892987656 1.0675348958284885 0.06422874550159163 0.08605399921783939 2461.2510774037823 3922851.5399687295 0.015290121197663067 0.019707472224654826 5.676782876240727e-09 8.24589771621211 0.03650100652972288 AVVQS(ph)PQVTEVL ddPTM_A549_MK2206_60min_R1 2 AVVQSPQVTEVL 12 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 AVVQS(0.997)PQVT(0.003)EVL;AVVQS(1)PQVTEVL 65.395 0.0059119 4539900.0 504.83 347.85 442.99 411.09000000000003 675.62 521.1600000000001 547.7 424.18 611.09 582.77 830.95 True False 590.032962091495 365.55407921252197 505.812643190708 511.80706845453125 576.2371929884023 576.3088052819903 647.2100004563675 484.3088139967686 472.67909071020665 451.12185224865704 624.6021819466833 0.9446540200236778 0.5852590493251367 0.8098156839834489 0.8194128731017138 0.9225667307028244 0.9226813833499938 1.0361955484036622 0.7753876435194869 0.7567682348419253 0.722254685122386 1.0 9.28679379896376 -6.4184185121648705 2.544094586524874 0.890540715718815 0.7585214446361044 0.09693492720192132 0.12143331666696441 0.40040022606093845 5.020400234524752 0.01785514472390432 0.04713594291904972 3.815763837603496e-07 6.4184185121648705 -0.1320192710827106 AVVQS(ph)PQVTEVL ddPTM_A549_PD325901_60min_R1 2 AVVQSPQVTEVL 12 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 AVVQS(1)PQVTEVL;AVVQS(0.988)PQVT(0.012)EVL 108.37 0.00011548 5996700.0 902.15 1316.6100000000001 879.1800000000001 861.85 1102.69 1021.5899999999999 1107.13 1236.57 1001.8199999999999 979.6399999999999 1293.51 True False 993.7356038722711 1427.5653453431967 938.8464417388226 915.0845170966345 1025.2408584739853 1013.2705097470849 1149.2624379947817 1211.9056412796017 959.7169893228951 917.7853632135916 1134.416470235476 0.8759883428578896 1.258413803747816 0.8276029715470739 0.8066565861007697 0.9037605547644874 0.8932085669884146 1.0130868760713816 1.0683075158702877 0.8460005778333615 0.8090374102405995 1.0 10.147734668539169 -5.7890859087039015 24.99926509916765 0.9241816742838718 1.0672018343533733 0.2057352842151282 0.11733248050737172 220.1115116090484 199034.97434605114 0.015247307535012567 0.0474212796607139 1.6252272343373542e-06 5.7890859087039015 0.14302016006950158 AVVS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 AVVSPPK 7 0 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 AVVS(1)PPK;AVVS(1)PPK 69.954 0.02163 51754000.0 12201.7 11767.099999999999 9512.7 9147.2 14183.099999999999 12886.3 11771.1 12099.3 16360.4 15997.0 16826.2 True False 14261.048657076248 12365.995128652208 10861.743901397878 11388.264410633408 12096.78477823896 14249.919712766348 13909.756502413644 13814.412827552225 12654.795522190288 12383.26658960098 12647.790160504583 1.127552598208769 0.9777198207531669 0.8587859035893863 0.9004153505167795 0.9564346518029486 1.1266726860526795 1.099777615369507 1.0922392490895896 1.0005538802902962 0.9790853921873536 1.0 13.626597716802493 -7.072784612075396 24.99971639283389 1.024823281225114 0.9554208822818587 0.19291640387351539 0.07764957308272576 218.77462267990077 75142.91583940426 0.012066009315194843 0.02089894836423831 8.456981643507733e-08 7.072784612075396 -0.06940239894325517 AVVS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 AVVSPPK 7 0 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 AVVS(1)PPK;AVVS(1)PPK 72.547 0.01968 74708000.0 15436.1 16228.5 15714.6 15170.599999999999 20168.7 15124.5 15402.3 16035.0 16179.1 16492.4 19072.8 True False 17003.16150854378 17596.132648925708 16781.08725556644 16107.653507067598 18752.12009023775 15001.331086511995 15988.44295496196 15715.169345785851 15499.148691335808 15451.067049389416 16726.966512440722 1.016511959648968 1.051961970261526 1.0032355384394094 0.9629751751513038 1.1210711802579874 0.8968351240109627 0.9558483268960045 0.9395110185757624 0.9265965039033395 0.9237220052959183 1.0 14.029888211400847 -7.27973579909632 24.99875475673789 0.9573058321263718 1.0269689093436394 0.4828907042954036 0.04484005113753369 705.341736658279 963719.8835027125 0.006922608809695561 0.011080352065504437 5.251268214079523e-08 7.27973579909632 0.06966307721726761 AVVS(ph)PPKFVFGSESVK ddPTM_A549_MK2206_60min_R1 2 AVVSPPKFVFGSESVK 16 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 AVVS(1)PPKFVFGSESVK;AVVS(1)PPKFVFGSESVK 178.73 3.3344e-29 152455000.0 33325.6 37154.3 36723.3 34630.8 46051.0 36494.9 36345.4 33396.6 52683.0 53399.0 50486.0 True False 38950.1465473057 39045.29517115371 41931.21614412359 43115.34755463568 39276.958903390834 40356.766094646024 42948.888717522124 38130.670322798054 40750.38461746357 41336.12881278384 37948.932857284126 1.026383184312109 1.0288904649306665 1.1049379517947389 1.136141237931013 1.034995082762961 1.063449300311477 1.1317548474694008 1.0047890006867228 1.0738216215648266 1.0892566852469359 1.0 15.211771696464222 -10.900487901394312 0.5455162703128993 0.9833201064875602 1.0708057758059477 0.0 0.04881680205576204 1.6301183854355898 0.5992625469693594 0.07554848127557803 0.009116376302877377 1.2575118857327143e-11 10.900487901394312 0.08748566931838753 AVVS(ph)PPKFVFGSESVK ddPTM_A549_PD325901_60min_R1 2 AVVSPPKFVFGSESVK 16 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 AVVS(1)PPKFVFGSESVK;AVVS(1)PPKFVFGSESVK 172.91 1.2368999999999999e-28 255210000.0 59968.0 62935.0 69459.0 65341.0 75381.0 76152.0 73228.0 76398.0 71548.0 75395.0 77616.0 True False 66055.90721389167 68238.75332040172 74172.90543089797 69376.96516982204 70086.4986103324 75531.84336011509 76014.73161189907 74874.18195692846 68541.08637487216 70634.54683300875 68069.72404836211 0.9704153812487961 1.0024831784527217 1.0896607334297355 1.0192044427935563 1.0296280701907563 1.1096246446724434 1.1167186686094421 1.0999630599902523 1.0069246986542086 1.0376793474706079 1.0 16.054725640671094 -8.892523189237641 10.283082434277157 1.003052653130217 1.055996438304422 0.11661087846374907 0.04580126379554379 0.3787411584125345 33.88274725227669 0.008184672041597977 0.008705436128493846 1.2807867048572714e-09 8.892523189237641 0.05294378517420495 AVVTEPAKGEEAFQMS(ph)EVDEESGLKDSEPER ddPTM_A549_MK2206_60min_R1 3 AVVTEPAKGEEAFQMSEVDEESGLKDSEPER 31 2 Q14966-3;Q14966;Q14966-5;A0A096LNS4 Q14966-3 ZNF638 Zinc finger protein 638 1 AVVTEPAKGEEAFQMS(0.992)EVDEES(0.007)GLKDS(0.001)EPER;AVVTEPAKGEEAFQMS(1)EVDEESGLKDSEPER;AVVTEPAKGEEAFQMS(1)EVDEESGLKDSEPER 152.3 1.4954e-37 26943000.0 4659.6 3953.5 4019.78 4439.25 5550.1 4881.7 4092.24 3782.8 6671.4 6649.5 7356.700000000001 True False 5446.026563717553 4154.716263236183 4589.845248978854 5526.866449285504 4733.687642173012 5398.2782537898 4835.74703718745 4319.023484339135 5160.33855203664 5147.37333172168 5529.828355409073 0.9848454985750962 0.7513282503917493 0.8300158619732271 0.9994643764809316 0.8560279520326692 0.9762108164730655 0.8744841116916949 0.7810411475275587 0.9331824100813162 0.9308378128385686 1.0 12.433018984897243 -9.411357990172844 1.5131152075823247 0.981822389555978 0.8822296284051647 0.12575489119981043 0.07906800581046027 0.36193067571354176 1.7022289173388725 0.01746280357435678 0.014491214655139601 3.878305443764304e-10 9.411357990172844 -0.09959276115081328 AVVTEPAKGEEAFQMS(ph)EVDEESGLKDSEPER ddPTM_A549_PD325901_60min_R1 1 AVVTEPAKGEEAFQMSEVDEESGLKDSEPER 31 2 Q14966-3;Q14966;Q14966-5;A0A096LNS4 Q14966-3 ZNF638 Zinc finger protein 638 1 AVVTEPAKGEEAFQMS(1)EVDEESGLKDSEPER 79.112 4.0669e-06 14677000.0 2337.4 2098.2 1833.0 1955.4 2510.7 2204.7 1863.7 2774.3 2428.8 2031.2 2536.2 True False 2574.6911272970647 2275.0226776335408 1957.3984027244285 2076.180616964391 2334.3570934447876 2186.745654165956 1934.6241233557726 2718.9644101037547 2326.725982379517 1902.9496853532403 2224.2634782964305 1.1575477241882457 1.0228206774208184 0.8800209245999963 0.9334238669218017 1.0494966609048844 0.9831324730651021 0.8697819040923634 1.2224111201907686 1.0460658123836852 0.8555414877425919 1.0 11.119111979340861 AVVVS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AVVVSPK 7 0 G3V5E1;O75909;O75909-1 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PK 53.775 0.044077 3504500.0 3082.4 4010.7 3663.3 2752.6 6217.1 4614.7 3284.1 4481.5 7631.2 5090.7 5663.2 True False 3602.6337625553642 4214.827498915229 4182.811024629267 3426.9871235689093 5302.572825742571 5103.024491010059 3880.778459921046 5116.766349018147 5902.745384522297 3940.707334355303 4256.871143631334 0.8463102689742515 0.9901233456927615 0.9826022173321202 0.8050483578052375 1.2456503020242229 1.1987735401962183 0.9116504420687112 1.2020016994578973 1.3866394319577515 0.925728592995106 1.0 12.055577704765815 -6.766783044689203 24.998336847668625 1.1720416094962351 0.9174984311149674 0.3055518845876304 0.1472105485051912 112.38156971121539 525738.5558476999 0.02377375297233021 0.045881163219194575 1.7108697804410967e-07 6.766783044689203 -0.2545431783812677 AVVVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AVVVSPK 7 0 G3V5E1;O75909;O75909-1 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PK;AVVVS(1)PK 101.64 0.010886 87080000.0 12929.2 12432.7 12918.5 12217.7 15748.3 11050.6 12262.6 13563.7 12793.4 13217.0 14020.1 True False 14241.762866026027 13480.447261564439 13795.22709525124 12972.359580590075 14642.193736685604 10960.60757741476 12729.2599533522 13293.161362983197 12255.737888246913 12382.476364372667 12295.716580736449 1.1582702620470633 1.0963531220851408 1.121953893835196 1.055030790227689 1.1908369585897378 0.8914167389468468 1.0352597077013779 1.081121321860121 0.9967485675009645 1.007056098200258 1.0 13.585868195601762 -7.249635223546062 24.999834059811896 1.0016926767264478 1.118926268390422 0.5685071677623561 0.053063400869370884 432.42560272908787 915827.3864912847 0.007302235195896518 0.012583061655974725 5.628138502948766e-08 7.249635223546062 0.11723359166397418 AVVVS(ph)PKEENK ddPTM_A549_MK2206_60min_R1 4 AVVVSPKEENK 11 1 G3V5E1;O75909;O75909-1 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK 137.16 2.6145999999999998e-08 1232466000.0 14599.000000000002 15446.900000000001 15283.3 14428.300000000001 18357.6 14269.3 14241.599999999999 13405.5 19995.9 21361.4 22520.9 True False 17062.954288718473 16233.08123095561 17450.70175325976 17963.234147711006 15657.221358165667 15779.26785480525 16829.114373743665 15305.770677621944 15466.860576890831 16535.84490386338 16928.33898478015 1.007952068071141 0.9589293577798961 1.0308572960967555 1.0611338870199434 0.9249118517914064 0.9321214484771363 0.9941385500889546 0.9041507670293571 0.9136667567205915 0.9768143772835803 1.0 14.047152801927629 -6.774620517095337 24.999323779615217 0.9527380819790773 1.0118860435408847 0.41394897611642223 0.03719622633660045 221.2106624980892 419547.7129137517 0.0063368502764314235 0.012028556277455025 1.6802715841849422e-07 6.774620517095337 0.05914796156180746 AVVVS(ph)PKEENK ddPTM_A549_PD325901_60min_R1 6 AVVVSPKEENK 11 1 G3V5E1;O75909;O75909-1 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK 144.57 1.9760999999999997e-11 2124841700.0 44753.6 44984.899999999994 46965.0 45585.0 51054.7 48034.4 46796.200000000004 49539.9 46318.7 46494.0 51011.5 True False 49296.95252614097 48775.935397520254 50152.327323487574 48400.68191895352 47468.79400115333 47643.22377215459 48577.054998863205 48551.78783120025 44372.0861166181 43558.3609052843 44737.40888854125 1.1019179194968436 1.0902718018166986 1.1210378197905257 1.0818838891527882 1.061053717246277 1.0649526862597896 1.085826296285689 1.085261507928681 0.9918340650252384 0.973645143682898 1.0 15.449194080025508 -8.759462199283266 24.960429100349312 0.9961438599448913 1.0860547787279717 0.8694674788714695 0.01684502040681863 12.429523525493472 156913.49407188702 0.002849055857755661 0.0031516462402727827 1.7399541359540125e-09 8.759462199283266 0.08991091878308044 AVVVS(ph)PKEENKAAEPPPPK ddPTM_A549_PD325901_60min_R1 1 AVVVSPKEENKAAEPPPPK 19 2 G3V5E1;O75909 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PKEENKAAEPPPPK 92.211 8.678e-07 5651900.0 1562.4 1879.4 2210.2 2376.9 2441.5 2982.9 3034.4 2739.8 2277.4 3190.5 2642.0 True False 1721.0136978219107 2037.783633754874 2360.1974630122904 2523.7157146684344 2270.0174627177494 2958.608251377344 3149.8757524873918 2685.1525396684797 2181.688797871833 2989.0512855058637 2317.05074901789 0.7427604676122795 0.8794730260520246 1.0186213936024873 1.0891931114319104 0.9797012273813699 1.2768853908924462 1.3594332164811256 1.1588665206433713 0.9415800662961602 1.2900240906561105 1.0 11.178073927723103 -5.5366142856097715 2.123064399793017 1.04201497331175 0.7313651529462535 0.30476752685304886 0.1505726037990454 0.4297121295152095 3.117319223718996 0.0218437661102859 0.20347722196176346 2.9066029794159365e-06 5.5366142856097715 -0.3106498203654966 AVYIGVHVPFS(ph)KESR ddPTM_A549_MK2206_60min_R1 2 AVYIGVHVPFSKESR 15 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 AVYIGVHVPFS(0.561)KES(0.439)R;AVYIGVHVPFS(0.554)KES(0.446)R 73.707 0.00032401 15480800.0 887.63 951.0 687.18 459.6 1114.13 887.4399999999999 414.27 773.1 1146.22 986.56 1100.27 True False 1037.4402435300485 999.401837950578 784.6324570482193 572.2020206322283 950.2429528790869 981.348311765004 489.53749660226333 882.689292519453 886.6030001372189 763.695410804323 827.042593092818 1.254397599584835 1.2084043147199994 0.9487207353057824 0.6918652381522636 1.1489649515214777 1.1865752984923577 0.5919132831739454 1.0672839583975209 1.0720161301749505 0.9234051754800183 1.0 9.69181782057567 -5.703616021837063 6.251491631991148 0.9982096623900976 1.2378711674307026 0.24291881134555204 0.17481937710633066 0.2254190594736711 17.583406800139915 0.022938254664023126 0.09017832336234581 1.978718335716407e-06 5.703616021837063 0.23966150504060502 AVYIGVHVPFS(ph)KESR ddPTM_A549_PD325901_60min_R1 2 AVYIGVHVPFSKESR 15 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 AVYIGVHVPFS(0.616)KES(0.384)R;AVYIGVHVPFS(0.706)KES(0.294)R 101.39 2.9962000000000002e-06 28070000.0 1182.3 1773.35 2059.17 1644.33 2343.7 1742.53 1872.37 2209.1 1774.83 1777.52 1854.87 True False 1302.326225636742 1922.796428072366 2198.9176589951217 1745.8965295556168 2179.086597326065 1728.3394134139805 1943.624064950178 2165.037767494575 1700.2400672375811 1665.2870838465396 1626.732748989709 0.8005778616343456 1.1819989664968193 1.3517387292785314 1.0732534466032697 1.3395479980835194 1.0624605759534715 1.1948023214982768 1.330911773208711 1.045187089454936 1.0237004725458283 1.0 10.667761539128662 -8.969374040896113 23.16446399793837 1.0199352426700192 1.1745556105365915 0.15532839457080794 0.14973531214249378 96.60311252360655 73068.32538217858 0.024574890549238955 0.025880102227056737 1.0730648253675454e-09 8.969374040896113 0.1546203678665723 AWLDEDSNLS(ph)PSPLR ddPTM_A549_MK2206_60min_R1 1 AWLDEDSNLSPSPLR 15 0 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDS(0.151)NLS(0.82)PS(0.029)PLR 59.607 0.0063403999999999995 2099000.0 1228.8 1449.8 1221.0 843.6 2021.9 1524.7 1818.3 1510.8 1958.5 1841.4 2048.8 True False 1436.191398724382 1523.5886274035197 1394.1561600394011 1050.2820378706429 1724.481188394735 1686.0427419860507 2148.6615735435707 1724.9605266309538 1514.9028770818372 1425.4264610921575 1540.0264159965889 0.9325758206523928 0.9893262943918842 0.9052806793169249 0.6819896249578158 1.1197737717237668 1.0948141697264142 1.3952108556223168 1.120085024979711 0.9836862935247163 0.9255857213135719 1.0 10.588739382270852 -6.80282750639579 24.999947726828037 1.0481945203523126 0.8872933167648965 0.33014962000978676 0.13795162713199746 174.96403927618752 105684.2162610707 0.021554962161651797 0.04073533571783338 1.5746081450383936e-07 6.80282750639579 -0.1609012035874161 AWLDEDSNLS(ph)PSPLR ddPTM_A549_PD325901_60min_R1 1 AWLDEDSNLSPSPLR 15 0 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDS(0.046)NLS(0.941)PS(0.013)PLR 124.09 2.67e-07 2883800.0 1824.1 1732.3 1540.5 1821.6 2055.9 2214.6 1797.5 1611.8 2035.9 2047.1 2290.3 True False 2009.281289168554 1878.2870005073794 1645.0475937790397 1934.1160948462384 1911.5006764699651 2196.565031848289 1865.9048461297423 1579.651384567361 1950.3382030329603 1917.8457566397274 2008.6076194079012 1.0003353914194806 0.935118926344142 0.8189989811270197 0.9629138494537717 0.9516545979415525 1.0935759730393704 0.9289543801888868 0.786440999876826 0.9709901447092402 0.9548135425300593 1.0 10.971980046432128 -8.017288496738702 0.009195685811345085 1.9064873679245078 6.430840136110354e-05 0.0 0.08122340106358278 3141.148950099026 16.875392423443184 1726.4114166099594 1770.6110887026696 9.609737027303442e-09 8.017288496738702 -1.9064230595231466 AWLDEDSNLSPS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 AWLDEDSNLSPSPLR 15 0 Q9C086;B8ZZ93;B8ZZH7;F8WCL7;J3KQ70 Q9C086 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDS(0.001)NLS(0.001)PS(0.998)PLR;AWLDEDSNLS(0.041)PS(0.959)PLR 159.18 1.384e-19 7374700.0 4437.5 4254.3 4239.5 3442.8 3988.0 4156.6 3878.8999999999996 3238.9 4978.9 3966.3999999999996 5045.6 True False 4887.991733285155 4612.82479146715 4527.217964184511 3655.4539368338965 3707.8966378531154 4122.75002771634 4026.513662115522 3174.2975986321053 4769.654147591145 3715.9608270899403 4425.023186693663 1.1046251120183208 1.0424408182398273 1.0230947439548237 0.8260869565217394 0.8379383522786966 0.9316900395265095 0.9099418222764379 0.7173516306484965 1.0778822949298459 0.8397607583761549 1.0 12.111469299460055 AWPPS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 AWPPSPGR 8 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 AWPPS(1)PGR 54.416000000000004 0.022997999999999998 1619800.0 1439.7 1328.8 1351.7 1309.4 1337.1 1385.3 1320.8 1363.2 1365.1 1299.1 1752.1 True False 1585.8572841488772 1440.782639424005 1443.4344904324114 1390.278664136837 1243.1867087445842 1374.0185760947509 1371.0637667694932 1336.009906590288 1307.7295942631245 1217.0746042942067 1536.6028074770038 1.0320541368479899 0.937641550837507 0.9393673390473831 0.9047742574540646 0.8090488333714626 0.8941924155083348 0.8922694661873524 0.8694568954900742 0.8510524566919975 0.7920554344766293 1.0 10.585528579334849 -5.056057386033437 1.4535102697436022 0.909734885166938 1.1325198508995724 0.2853798997358309 0.059081519853184626 2.281555490123647 2.963604319598052 0.00931691194078602 0.843485444363321 8.78906373787219e-06 5.056057386033437 0.2227849657326344 AWSKHAQKPSQPKQPPK ddPTM_A549_MK2206_60min_R1 1 AWSKHAQKPSQPKQPPK 17 3 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 0 17.078 0.055813999999999996 1217300.0 778.67 916.34 532.7 459.32 1150.2 858.63 856.29 634.67 1045.6 1076.7 786.95 False True 910.0904593462843 962.9777919954074 608.2448701498681 571.8534206196586 981.0071036607263 949.489656687534 1011.8668090027084 724.6364160953583 808.7732694800964 833.4727221993734 591.5285962849058 1.538540089290874 1.6279479944729427 1.0282594518167825 0.9667384201054401 1.6584271831014419 1.6051458249876707 1.7105966057393267 1.22502347417595 1.3672597986971302 1.4090150965380155 1.0 9.20830410427587 -10.321080140039816 0.6636347703938721 0.9909612370596301 1.4193175841438657 0.009747562579139113 0.2663216995140385 0.8381411035985019 0.6623581560287422 0.1886236912037865 0.054112912634659935 4.774411636633871e-11 10.321080140039816 0.42835634708423553 AWYKGS(ph)PK ddPTM_A549_MK2206_60min_R1 1 AWYKGSPK 8 1 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 AWY(0.002)KGS(0.998)PK 43.308 0.019685 3592100.0 2925.9 3333.0 2401.8 2722.1 4465.7 3602.9 2648.9 3082.5 4655.6 4512.2 5119.8 True False 3419.72038861301 3502.635463605968 2742.4113555959307 3389.0146221997124 3808.801445677021 3984.156486588537 3130.170842083023 3519.4538147603334 3601.114033465511 3492.890886141 3848.4123607083843 0.8886054996412952 0.9101507674612166 0.7126084989216515 0.8806266856433987 0.9897072061622648 1.035272760077916 0.8133667987457682 0.9145209725167033 0.9357401691752822 0.9076186642062591 1.0 11.910047678072356 -2.0000002463251563 0.02613979570007509 1.4977080098116953 0.0851638604383835 0.08108678897050348 0.08196088140936009 1441.8522258022203 2.817186089102252 50.98711526773027 112.68842127422249 0.00999999432815528 2.0000002463251563 -1.4125441493733117 AWYKGS(ph)PK ddPTM_A549_PD325901_60min_R1 1 AWYKGSPK 8 1 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 AWYKGS(1)PK 56.403999999999996 0.0052563 5952000.0 5164.4 3348.3 4604.7 3846.5 4283.4 4999.2 4566.1 4120.6 5270.7 5344.3 5895.7 True False 5688.686086169657 3630.4729918598737 4917.202632310511 4084.089568964676 3982.5487609277925 4958.488172679478 4739.865434165791 4038.411400451837 5049.190808352975 5006.859985936057 5170.566275921565 1.1002056220922816 0.7021422409313967 0.9509988596817868 0.7898727820168512 0.7702345446133889 0.9589835828563503 0.9167014174518034 0.7810385139550424 0.9765256915603588 0.9683388083143117 1.0 12.336106576561217 -8.887627788731912 8.254530323311105 0.9896665646309296 0.8667522790665305 0.1766758659236889 0.10568011168262363 0.2503935846363877 17.33338732859839 0.01655780308411201 0.01759215172926587 1.2953055050089837e-09 8.887627788731912 -0.1229142855643991 AY(ph)TNFDAER ddPTM_A549_MK2206_60min_R1 4 AYTNFDAER 9 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 AY(0.804)T(0.196)NFDAER;AY(0.974)T(0.026)NFDAER;AY(0.981)T(0.019)NFDAER;AY(0.985)T(0.015)NFDAER 137.98 4.5735e-05 22303700.0 4974.49 5761.65 4701.54 4467.48 6782.799999999999 5466.83 4963.38 4746.21 6934.7 7109.34 7266.6 True False 5814.062297396195 6054.8933750031 5368.289068527147 5562.012800552795 5785.059105120826 6045.3263220119425 5865.161898968647 5418.999802158521 5364.001522440342 5503.335156348935 5462.102672042566 1.06443665498181 1.1085279311929994 0.9828246356489052 1.0182915141858486 1.05912675987057 1.1067763982091678 1.0737919535985865 0.9921087404481309 0.9820396730906673 1.0075488299620246 1.0 12.415240717596205 -8.270573704682395 23.50071365013323 0.991326004141684 1.0583413378435291 0.44334973769266284 0.03420947357032415 200.79855870572914 516612.17782427784 0.005810377269566136 0.007080977509844985 5.3632284366768465e-09 8.270573704682395 0.06701533370184509 AY(ph)TNFDAER ddPTM_A549_PD325901_60min_R1 2 AYTNFDAER 9 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 AY(0.969)T(0.031)NFDAER;AY(0.968)T(0.032)NFDAER 108.43 0.00047004 8820400.0 2119.7 1996.13 1933.6599999999999 2055.6 2227.0 2110.1 1954.0900000000001 1665.9 2248.87 2330.2 2322.6000000000004 True False 2334.890383559335 2164.350880518844 2064.88979564218 2182.5697433936784 2070.58320273292 2092.9160452014257 2028.4539642690777 1632.672317626732 2154.3578145560864 2183.0707743255803 2036.934924174471 1.1462763762595998 1.062552786950723 1.0137239884966078 1.0714970407207438 1.0165190739081102 1.0274830189038282 0.9958364109698642 0.8015338625942708 1.057646854098299 1.0717430136902066 1.0 10.99218417460238 -2.000003444308514 0.6708750776005197 1.0087096895681877 15.137361866701351 0.2732024648169933 0.06951616412596025 244.84325155225383 1.3487362364246007 0.011287729941060037 5170.7618888203915 0.00999992069218009 2.000003444308514 14.128652177133164 AYAALAALEK ddPTM_A549_MK2206_60min_R1 1 AYAALAALEK 10 0 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 0 65.252 0.015659 1228400.0 1218.4 1432.9 1227.8 1349.1 2157.1 1712.6 1148.2 1398.5 2116.4 1987.0 2069.9 False True 1424.03613297997 1505.828489589257 1401.9205022902338 1679.6295605634007 1839.793447493092 1893.8261952681266 1356.813077458466 1596.7416577266272 1637.038779196323 1538.1353199685664 1555.8867036662143 0.915256959021786 0.9678265686318916 0.9010427937887879 1.0795320485775763 1.1824726332308733 1.217200578169097 0.8720513352683965 1.0262583091456108 1.0521580879500325 0.9885908249901362 1.0 10.603521294851312 -6.259465140780722 24.92843324749852 1.0423102349765587 0.9320205515617004 0.2713769173479721 0.08952347422554462 199.22778025956865 2515593.490555579 0.012799196425591823 0.03212797306420146 5.502180827182842e-07 6.259465140780722 -0.11028968341485834 AYDATHLVK ddPTM_A549_PD325901_60min_R1 1 AYDATHLVK 9 0 H7BZT7;X6RA14;U3KQT1;P10768 H7BZT7 ESD S-formylglutathione hydrolase 0 69.423 0.011512999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AYGELPEHAK ddPTM_A549_MK2206_60min_R1 1 AYGELPEHAK 10 0 X6RAC9;A6NJH9;P47813;O14602 X6RAC9 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal 0 63.283 0.027410000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AYGELPEHAK ddPTM_A549_PD325901_60min_R1 2 AYGELPEHAK 10 0 X6RAC9;A6NJH9;P47813;O14602 X6RAC9 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal 0 ; 98.04799999999999 0.00054028 12939500.0 3670.1000000000004 3691.0 2943.8 2989.0 3706.6 3460.6 2923.0 4091.0 3872.7 3803.3999999999996 4880.5 False True 4042.6858502151813 4002.0535235656284 3143.583970507459 3173.623741488473 3446.261203075816 3432.418020958274 3034.2363645269747 4009.4017956725875 3709.9438866770233 3563.252674907697 4280.229440038537 0.9445021363571535 0.9350091109904604 0.7344428644645637 0.7414611263128688 0.8051580531731466 0.801923838206059 0.708895727912113 0.9367259049637509 0.8667628543397946 0.8324910439557219 1.0 12.063472418469289 -9.865330906442235 0.5971529985640859 0.9962366038403124 0.8160301923275435 0.04576615194989908 0.09124171448359418 0.5894810410089433 0.4315254055264069 0.04831440079570188 0.019948442218225355 1.3635438017906624e-10 9.865330906442235 -0.18020641151276895 AYGPGLEK ddPTM_A549_PD325901_60min_R1 1 AYGPGLEK 8 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 96.492 0.0068792 4297800.0 2857.0 2553.3 3165.9 3078.1 3851.1 3706.0 3627.0 3478.9 3715.3 3488.6 4135.3 False True 3147.0405367877606 2768.47555180713 3380.7570121032545 3268.227246127694 3580.6120215737556 3675.8195647203843 3765.027469770555 3409.5106103557464 3559.158861303779 3268.3292006317993 3626.6843158265233 0.8677459251290109 0.763362705633284 0.932189492575887 0.9011612154566211 0.9872963042160267 1.0135482563727534 1.0381459046050174 0.9401178358637253 0.9813809395463318 0.9011893277749887 1.0 11.824435456269518 -6.235473082683695 1.3259687489481127 0.992163097757021 0.8171910404345003 0.576883214366094 0.04886275480202463 0.17290374738107245 0.5463505793872998 0.0055291916925376905 0.024740084182266503 5.814694703270685e-07 6.235473082683695 -0.17497205732252075 AYGSELYGPGRPLS(ph)PR ddPTM_A549_MK2206_60min_R1 3 AYGSELYGPGRPLSPR 16 1 A7MCY6 A7MCY6 TBKBP1 TANK-binding kinase 1-binding protein 1 1 AYGSELYGPGRPLS(1)PR;AYGSELYGPGRPLS(1)PR;AYGSELYGPGRPLS(1)PR 76.539 0.00012702 22204800.0 3278.92 3272.26 3361.6000000000004 3160.66 4452.7 3545.5 3012.0 3540.7 4370.299999999999 4868.1 5038.3 True False 3832.3215341026603 3438.804057047485 3838.32542800037 3935.0218418874188 3797.713728456021 3920.6824566875766 3559.241412040496 4042.6050679389828 3380.4340279350254 3768.3928289577175 3787.1510599939534 1.0119272966388564 0.9080187197637095 1.0135126292021999 1.0390453878260937 1.002789080312546 1.0352590627039409 0.9398202912049087 1.0674528171436175 0.8926060709974486 0.9950468754113373 1.0 11.88689725253287 -8.769170304178603 24.996658372294647 0.949286208194612 0.9997307019752314 0.09373963398071228 0.05011003411886532 243.85389368083867 788459.2261436267 0.009421931420495236 0.010121618269269616 1.701491155047267e-09 8.769170304178603 0.05044449378061944 AYGSELYGPGRPLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 AYGSELYGPGRPLSPR 16 1 A7MCY6 A7MCY6 TBKBP1 TANK-binding kinase 1-binding protein 1 1 AYGSELYGPGRPLS(1)PR;AYGSELYGPGRPLS(1)PR 101.49 3.3866999999999995e-07 37060000.0 3347.6 4323.4 3784.8999999999996 4371.799999999999 4813.3 4211.9 3782.2 4366.5 4190.200000000001 4314.0 5185.5 True False 3687.445887627129 4687.748090973618 4041.7660744526374 4641.836156921813 4475.230412983554 4177.599682850995 3926.1336906992524 4279.406732047014 4014.1004658130155 4041.613303768152 4547.716373592835 0.8108346221938934 1.0307916558283852 0.8887462942768171 1.0206960539306063 0.9840610199373504 0.9186148254779054 0.8633198221193127 0.941001236773733 0.8826628874926413 0.8887127014420985 1.0 12.15092656545983 -7.307456123593757 24.875514687560333 0.9346054354946974 0.9525347440990963 0.007509454298615603 0.06766949952762075 2003.5318916279834 1083053.5760194873 0.010446668608361626 0.01670019342705131 4.926561134682135e-08 7.307456123593757 0.017929308604398897 AYGVPVKPMT(ph)PK ddPTM_A549_MK2206_60min_R1 3 AYGVPVKPMTPK 12 1 H3BT74;F8W872;Q15131-4;Q15131-3;Q15131-2;Q15131 H3BT74 CDK10 Cyclin-dependent kinase 10 1 AY(0.002)GVPVKPMT(0.998)PK;AYGVPVKPMT(1)PK;AY(0.099)GVPVKPMT(0.901)PK 88.507 0.00010992 33424400.0 11041.1 12713.100000000002 13204.5 11515.3 16097.4 12868.4 12557.800000000001 13325.7 18701.1 17826.2 17748.6 True False 12904.567751021941 13360.142487959518 15077.09665457843 14336.549016941468 13729.493784096841 14230.125546647407 14839.389709203893 15214.65878324471 14465.330709520118 13799.249039166423 13341.132783559671 0.9672767643032748 1.0014248943255608 1.130121174804436 1.074612572225385 1.029110046863168 1.0666354782244012 1.1123035764617026 1.1404323028696477 1.0842655525733018 1.0343386324863875 1.0 13.70359354920839 -5.5376025034014775 24.491069766720933 1.0601784823734872 0.975813764242891 0.37196442523899287 0.04286042855446756 156.6739796342891 260607.18274845634 0.007139481905204895 0.027674725504304068 2.8999966525699057e-06 5.5376025034014775 -0.0843647181305962 AYGVPVKPMT(ph)PK ddPTM_A549_PD325901_60min_R1 4 AYGVPVKPMTPK 12 1 H3BT74;F8W872;Q15131-4;Q15131-3;Q15131-2;Q15131 H3BT74 CDK10 Cyclin-dependent kinase 10 1 AYGVPVKPMT(1)PK;AYGVPVKPMT(1)PK;AYGVPVKPMT(1)PK;AYGVPVKPMT(1)PK 97.79700000000001 0.00010012 103229000.0 34242.0 33942.8 37004.7 37843.0 43878.2 43429.1 42111.299999999996 40640.5 44511.3 42471.5 44220.3 True False 37718.22263237192 36803.27887826697 39516.06146933805 40180.47616231124 40796.346603572354 43075.42780847221 43713.86856568753 39829.8933456445 42640.64485321532 39789.84224176847 38781.4834355775 0.9725832869448681 0.9489910033844718 1.0189414630046527 1.0360737290789224 1.051954257276978 1.110721509145664 1.1271840242600193 1.0270337753275627 1.0995104125928687 1.0260010375277682 1.0 15.243080368765664 -6.022196185711989 1.8741606962453041 1.0572545487965452 0.9583543589615067 0.5048922735963794 0.03765229734862197 0.28479975229468235 1.8875614963517502 0.006673623002678697 0.029021998888456763 9.501754698466001e-07 6.022196185711989 -0.09890018983503857 AYHELLEAS(ph)LLR ddPTM_A549_MK2206_60min_R1 4 AYHELLEASLLR 12 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0;C9JT60;C9J068 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 AYHELLEAS(1)LLR;AYHELLEAS(1)LLR;AYHELLEAS(1)LLR;AYHELLEAS(1)LLR 70.889 0.00086268 4796830.0 311.81 439.91999999999996 468.48 0.0 855.08 404.23 168.72 516.8100000000001 515.81 610.35 858.99 True False 364.43590497741644 462.31004894975626 534.9175084809651 0.0 729.2988647176269 447.00535029384264 199.37424005294577 590.0694001642458 398.9798585793119 472.47151109351546 645.6790760820529 0.5644226651865422 0.7160059324750457 0.8284572449316722 0.0 1.129506734433729 0.6923026730341765 0.308782253349045 0.9138741241930222 0.6179228557324499 0.7317435682761289 1.0 9.334673465548587 -11.02294962791596 0.4992350128629055 1.1187755627385871 0.6291499379227636 0.05053250621569971 0.29418858128470426 2.5810008778786035 0.7167897251382286 0.6412117862850811 0.06292145809408314 9.485284729537564e-12 11.02294962791596 -0.4896256248158235 AYHELLEAS(ph)LLR ddPTM_A549_PD325901_60min_R1 3 AYHELLEASLLR 12 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0;C9JT60;C9J068 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 AYHELLEAS(1)LLR;AYHELLEAS(1)LLR;AYHELLEAS(1)LLR 86.756 8.7531e-05 10509300.0 2246.2599999999998 1794.9299999999998 2152.6150000000002 2733.51 2472.8 2472.39 2550.26 2462.65 2900.7200000000003 2805.39 2527.7999999999997 True False 2474.2986615907867 1946.1950504073839 2298.704398625557 2902.352704448362 2299.1190586968874 2452.2556755582905 2647.311539855819 2413.530513838449 2778.8128259255227 2628.2571966291466 2216.896625044443 1.1161091742566855 0.8778916564809907 1.0369019342881962 1.3091962302888964 1.0370889795778346 1.1061660015424168 1.1941520005709545 1.0886978159344998 1.2534697353647757 1.185556947914275 1.0 11.114325782872323 -6.010953118622345 24.808839700500933 1.130009678288595 0.9870994937105392 0.26139288667292415 0.10042263225452668 539.2415134885907 1221393.186061812 0.015528370942328052 0.04416562226420201 9.750948919319984e-07 6.010953118622345 -0.14291018457805593 AYHEQLS(ph)VAEITNACFEPANQMVK ddPTM_A549_PD325901_60min_R1 1 AYHEQLSVAEITNACFEPANQMVK 24 0 Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2;C9JDS9;P68366-2;P68366 Q71U36-2;P68366-2 TUBA1A;TUBA1B;TUBA3E;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 1 AYHEQLS(1)VAEITNACFEPANQMVK 124.08 6.3953e-17 10702000.0 1904.7 1915.0 2052.1 2350.8 2282.2 2842.6 1803.6 1914.2 1507.2 1471.1 1962.7 True False 2098.0637418339697 2076.3837706930835 2191.3678462797575 2496.003576945835 2121.9061451625826 2819.450808061027 1872.2369849677898 1876.0197793391505 1443.8576254291854 1378.214494940504 1721.3003425803986 1.2188830095094072 1.2062878971954307 1.2730886017222778 1.450068599419483 1.2327344000766516 1.6379772537745463 1.0876875688998715 1.0898852065101041 0.8388179504250262 0.8006821708258216 1.0 10.749283133897558 -8.189042101618163 2.3820642997457857 0.9285643946322756 1.3266810516736005 0.6421962012908906 0.14014072893403576 0.13737249913417407 1.5291792611156962 0.02255455249718089 0.029526886335451703 6.470798831285592e-09 8.189042101618163 0.39811665704132493 AYIDSFR ddPTM_A549_PD325901_60min_R1 1 AYIDSFR 7 0 P14868;H7BZ35;P14868-2 P14868 DARS Aspartate--tRNA ligase, cytoplasmic 0 60.358000000000004 0.036706 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AYILVT(ph)PLK ddPTM_A549_MK2206_60min_R1 2 AYILVTPLK 9 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 AYILVT(1)PLK;AYILVT(1)PLK 110.14 0.00039646 56255000.0 4615.200000000001 4682.1 5172.0 5397.4 7092.5 5325.200000000001 5641.3 5541.3 7057.700000000001 7295.1 7220.0 True False 5394.132929193335 4920.398891133962 5905.46737078115 6719.763242298492 6049.202645377935 5888.709129418325 6666.251187830029 6326.796244519529 5459.142218830984 5647.131843333007 5427.07473813714 0.993930098527607 0.9066392354167033 1.088149261937052 1.2381925008471637 1.1146341145569598 1.0850613661236663 1.2283322986110636 1.1657838798607039 1.00590879658769 1.0405480145039245 1.0 12.40595906133528 -8.807608184810968 14.298776576023911 1.0027795432347708 1.1041024093285965 0.1506170691304528 0.09071403183852954 2.343244496085484 724.5331990782493 0.016825172172521153 0.017911536518700383 1.5573700382601167e-09 8.807608184810968 0.10132286609382568 AYILVT(ph)PLK ddPTM_A549_PD325901_60min_R1 2 AYILVTPLK 9 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 AYILVT(1)PLK;AYILVT(1)PLK 134.68 4.8743000000000004e-05 90728000.0 11189.1 10866.8 10879.3 11517.5 12928.0 11737.7 13166.7 12060.2 12396.400000000001 11877.9 12185.5 True False 12325.009195019937 11782.58337303791 11617.634720545482 12228.909816859652 12019.981879178813 11642.112062822036 13667.765973594693 11819.649849956128 11875.422417642223 11127.927366904907 10686.760750248855 1.1532970076768054 1.1025402035657565 1.0871053438971159 1.1443046309963367 1.1247544658374533 1.0893957799654992 1.2789437597614806 1.1060086518434402 1.1112274986941846 1.0412816031879237 1.0 13.383537005504781 -10.176972428110627 0.7347337003655564 1.0030980773743177 1.1343410995167889 0.41237612313137084 0.05146406472390841 0.4196640144574367 0.4366093071008221 0.02866191003630816 0.010406191530860786 6.653153934875109e-11 10.176972428110627 0.1312430221424712 AYLGYQAVPS(ph)GSSGSLSTSSSSSPPGTPSPADAK ddPTM_A549_MK2206_60min_R1 1 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGY(0.001)QAVPS(0.09)GS(0.09)S(0.09)GS(0.09)LS(0.09)T(0.09)S(0.09)S(0.09)S(0.09)S(0.09)S(0.09)PPGT(0.011)PS(0.002)PADAK 42.708999999999996 0.013347999999999999 6080500.0 505.94 364.1 692.55 544.77 627.87 606.13 510.32 454.0 1237.8 994.98 1028.2 True False 591.3303029546006 382.63113480316014 790.7640037963037 678.2386744556544 535.5111547343597 670.2702742834689 603.0385383109247 518.355890316688 957.4402763604278 770.2133269563789 772.8695631236293 0.7651100925293012 0.49507853984664413 1.023153248007791 0.8775590433584747 0.6928868469991729 0.867248894592905 0.780259136967025 0.6706900039143747 1.2388122421212158 0.9965631507643864 1.0 9.59408114142371 -8.759208048040472 24.99999992463774 1.112772452668829 0.7750714274887037 0.47994268621044256 0.14104330602149467 33.7746895104674 378413.530547906 0.025295376333117986 0.028011184919214744 1.7409726635704011e-09 8.759208048040472 -0.33770102518012524 AYLGYQAVPS(ph)GSSGSLSTSSSSSPPGTPSPADAK ddPTM_A549_PD325901_60min_R1 1 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGYQAVPS(0.091)GS(0.091)S(0.091)GS(0.091)LS(0.091)T(0.091)S(0.091)S(0.091)S(0.091)S(0.091)S(0.091)PPGTPSPADAK 57.078 0.00089798 40317000.0 882.78 877.04 748.88 563.59 1032.2 1047.8 602.54 1044.9 1150.8 943.91 775.76 True False 972.3991757317123 950.951238772148 799.7035001812703 598.4016742942416 959.7018328966869 1039.2670641969823 625.4699894225395 1024.0586497918075 1102.4358780148007 884.3113615113111 680.3464379478114 1.4292706208102524 1.3977455980229507 1.1754357127134907 0.8795543577758017 1.4106075660387372 1.5275556778570263 0.9193404338372071 1.5052017511560218 1.6204036892442248 1.2997956808280455 1.0 9.410125755307504 AYLGYQAVPSGS(ph)SGSLSTSSSSSPPGTPSPADAK ddPTM_A549_MK2206_60min_R1 1 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGYQAVPS(0.028)GS(0.097)S(0.097)GS(0.097)LS(0.097)T(0.097)S(0.097)S(0.097)S(0.097)S(0.097)S(0.097)PPGTPSPADAK 70.632 8.553799999999999e-05 13372000.0 407.18 381.95 357.91 301.92 337.78 492.34 217.81 328.62 585.64 596.31 527.07 True False 475.90202940478 401.3896235596457 408.6670198523356 375.8904135537039 288.0930094544601 544.4390920111582 257.3832576216935 375.20289135654207 452.9934750749077 461.60315684471874 396.18397260802504 1.2012147444329508 1.0131394789076211 1.0315082085782934 0.9487774355920271 0.7271697730677572 1.3742077662233279 0.6496559058847702 0.9470420746367719 1.1433917230243147 1.1651232476822526 1.0 8.6300267077946 -8.743095144957694 24.92303812381748 1.0677127697907987 0.9807534894130868 0.05954400996222198 0.1913883994442019 628.1468197317231 853419.4705131531 0.030383355335593915 0.03441958461224397 1.8067782548229017e-09 8.743095144957694 -0.08695928037771183 AYLGYQAVPSGSS(ph)GSLSTSSSSSPPGTPSPADAK ddPTM_A549_MK2206_60min_R1 1 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGYQAVPS(0.025)GS(0.021)S(0.106)GS(0.106)LS(0.106)T(0.106)S(0.106)S(0.106)S(0.106)S(0.106)S(0.106)PPGT(0.002)PSPADAK 72.707 2.5198e-05 12616000.0 529.72 431.23 586.68 488.1 676.2 378.57 587.76 454.89 954.69 515.67 733.72 True False 619.1237855894204 453.1777650677475 669.880045841045 607.6845219116417 576.7318757567239 418.630026125572 694.5483839113288 519.3720505421988 738.454239326658 399.1797888516308 551.5170743581692 1.1225831699044475 0.8216930828390678 1.2146134308182956 1.101841720165849 1.0457189859949458 0.7590517965608858 1.2593415801670564 0.9417152699154794 1.3389508206723026 0.7237850057791562 1.0 9.107261740524377 AYLGYQAVPSGSSGSLST(ph)SSSSSPPGTPSPADAK ddPTM_A549_PD325901_60min_R1 1 AYLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAK 34 0 P17676-3;P17676-2;P17676 P17676-3 CEBPB CCAAT/enhancer-binding protein beta 1 AYLGYQAVPS(0.002)GS(0.001)S(0.003)GS(0.003)LS(0.038)T(0.159)S(0.159)S(0.159)S(0.159)S(0.159)S(0.159)PPGT(0.001)PSPADAK 85.412 1.9885e-06 39528000.0 880.48 1137.8 1396.3 1054.5 879.09 1384.5 1248.5 1629.2 1516.5 1348.1 1423.9 True False 969.865681424882 1233.6863991094474 1491.0613146339983 1119.6340700567405 817.3457510958611 1373.2250910295118 1296.0123507054145 1596.7043279173256 1452.766778770807 1262.9807359318143 1248.7693268457886 0.7766571940669164 0.9879217663245794 1.1940246149384566 0.89658998342374 0.6545210020175294 1.099662733147106 1.0378316658201039 1.2786223152600735 1.1633587945663966 1.0113803316437324 1.0 10.286291291031178 AYNLNRT(ph)PSTVTLNNNSAPANR ddPTM_A549_MK2206_60min_R1 1 AYNLNRTPSTVTLNNNSAPANR 22 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 AYNLNRT(0.99)PS(0.008)T(0.002)VTLNNNSAPANR 93.446 4.8872e-07 4946500.0 2287.8 3239.8 2245.3 2138.0 2865.7 2225.4 2190.6 2420.7 3323.1 3212.4 3732.1 True False 2673.9247086601895 3404.6919816953537 2563.71730232307 2661.8100959784656 2444.159326169834 2460.8903508990343 2588.603664414312 2763.841638082835 2570.4231559002574 2486.716608891305 2805.316569280001 0.9531632678968798 1.213656960850299 0.9138780736539338 0.9488448202698324 0.8712597191115369 0.8772237607146898 0.922749215814417 0.9852155968237798 0.9162684825121072 0.8864299438154082 1.0 11.453947867317984 -5.792805317094908 24.99999594649188 0.9442606396594787 1.083410467253599 0.411336439039372 0.07011070036693352 124.35558551054879 99116.65989984054 0.009142752791414938 0.02842984285359525 1.61136780752089e-06 5.792805317094908 0.1391498275941202 AYNLNRT(ph)PSTVTLNNNSAPANR ddPTM_A549_PD325901_60min_R1 2 AYNLNRTPSTVTLNNNSAPANR 22 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 AYNLNRT(0.912)PS(0.034)T(0.054)VTLNNNSAPANR;AYNLNRT(0.949)PS(0.045)T(0.006)VTLNNNSAPANR 166.57 4.4582999999999995e-34 25780000.0 6370.1 6362.6 6920.700000000001 6813.3 7864.0 7368.4 6012.4 7119.3 6932.1 7962.7 7787.4 True False 7016.787862580236 6898.798631546641 7390.380319549892 7234.142066873005 7311.659769327207 7308.394193385236 6241.2051721115195 6977.299976517194 6640.7679440271095 7459.933763077115 6829.599168395876 1.0274084451472028 1.0101322876269205 1.0821104046265326 1.0592337688497386 1.0705840253644865 1.070105874910638 0.9138464817954232 1.0216265705321048 0.9723510531565911 1.09229452258313 1.0 12.737585193377038 -7.724115030021357 24.999995439822246 0.9847809598006523 1.0536720701291258 0.22737592133674955 0.045041249438668766 96.82505230324635 64853.57858941782 0.004648508031921624 0.006894753559490661 1.887491349820401e-08 7.724115030021357 0.0688911103284735 AYPQS(ph)PK ddPTM_A549_MK2206_60min_R1 2 AYPQSPK 7 0 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 AYPQS(1)PK;AYPQS(1)PK 87.30799999999999 0.012927000000000001 27365000.0 5538.5 6502.5 6163.5 4874.4 7712.900000000001 6638.5 5677.0 6462.5 8889.0 9027.8 9157.4 True False 6473.263396675609 6833.449475576903 7037.576979854908 6068.628218820132 6578.342627216846 7340.98166372034 6708.437415721744 7378.579165576208 6875.655692816156 6988.413709920593 6883.364848617319 0.9404213693504728 0.9927484051567538 1.0224035968787222 0.8816368668935448 0.9556870472350826 1.0664815573730548 0.9745869299764471 1.0719436391721069 0.9988800309193677 1.01526126590898 1.0 12.748898265825048 AYPQS(ph)PK ddPTM_A549_PD325901_60min_R1 2 AYPQSPK 7 0 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 AYPQS(1)PK;AYPQS(1)PK 107.1 0.0093402 35631000.0 10662.6 11226.900000000001 10557.2 10720.7 12527.5 11390.1 10865.7 11892.3 11763.099999999999 12668.6 13839.599999999999 True False 11745.059302608748 12173.03026380897 11273.675077600828 11382.893290523745 11647.611617528815 11297.342801975617 11279.20015943919 11655.098747171125 11268.73781428215 11868.7024339632 12137.416936452675 0.967673712133465 1.0029341768139592 0.9288364350195679 0.937834907552459 0.9596450116620109 0.9307864153571229 0.9292916457013207 0.9602618751743636 0.9284296546193784 0.9778606515788021 1.0 13.567173802009336 -10.92561979007564 1.1559152872377634 1.0002803881637667 0.9478134098257209 0.296550078235128 0.022556652459722683 0.3878396933054101 0.9125536820366346 0.016362351775709414 0.003773449417910956 1.1868073025821568e-11 10.92561979007564 -0.05246697833804581 AYQDQIS(ph)PVPGAPK ddPTM_A549_PD325901_60min_R1 1 AYQDQISPVPGAPK 14 0 E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6 E7ER32 MKL1;mkl1 MKL/myocardin-like protein 1 1 AYQDQIS(1)PVPGAPK 114.69 4.2221e-06 6609400.0 2258.7 2956.5 2116.4 2553.0 2256.3 3406.7 2273.6 3039.7 2781.3 3613.8 3360.3 True False 2488.0015612329435 3205.6546308376523 2260.031630947069 2710.6930117163183 2097.825271812434 3378.956964687783 2360.123092161659 2979.0707989014804 2664.411633231287 3385.6240512650347 2947.0044026967485 0.8442476566903734 1.0877671671967024 0.7668911620488101 0.9198130173255982 0.7118500637096957 1.1465734362648943 0.8008549597014359 1.0108810140138877 0.904108467158425 1.1488357629078918 1.0 11.525033500449423 -7.25042547306295 24.969876208265397 0.9575128492188744 0.8758988289480972 0.1658598556335631 0.13177409673291926 1286.4313807115734 2916496.5190735054 0.016060241628248862 0.027647418404653377 5.617906759565193e-08 7.25042547306295 -0.08161402027077713 AYQHGGVTGLS(ph)QY ddPTM_A549_PD325901_60min_R1 2 AYQHGGVTGLSQY 13 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 AYQHGGVTGLS(1)QY;AYQHGGVTGLS(1)QY 182.1 4.4256e-25 150575000.0 6095.9 6881.7 6894.1 7080.6 8489.2 7377.1 6892.5 7294.2 7339.6 8208.8 9119.9 True False 6714.751280435599 7461.645010328246 7361.975083591099 7517.952580790665 7892.9478781501175 7317.02334346971 7154.79785922072 7148.7114588108 7031.1421361465345 7690.494967077429 7998.210115809332 0.8395317431287737 0.9329143523723505 0.9204528234435045 0.939954373783031 0.9868392757710688 0.9148325984843556 0.8945498749874655 0.8937889046801352 0.8790894505570337 0.9615269986313975 1.0 12.96546146641708 -10.915039778214451 1.1729399206803006 0.9999273684887069 0.9115047601005491 0.32983020490035275 0.037020656075384246 0.3673446252045519 0.8989745240343657 0.026112964446934925 0.006210470055047766 1.216074611959413e-11 10.915039778214451 -0.08842260838815774 AYQQKPYPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 AYQQKPYPSPK 11 1 A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3 A0A2R8YDI1 CUX1 Homeobox protein cut-like 1 1 AYQQKPY(0.01)PS(0.99)PK;AY(0.001)QQKPY(0.007)PS(0.992)PK 76.759 0.00033514 182721000.0 10330.4 11810.6 11826.599999999999 10352.3 15340.9 12082.4 10904.0 11141.2 16636.4 15481.2 15727.099999999999 True False 12073.918965968716 12411.709092848681 13503.789715251414 12888.613964732402 13084.273931967346 13360.951548351977 12885.115656337846 12720.49921849403 12868.281962871726 11983.986167839654 11821.627024121415 1.0213415582586485 1.0499154699706932 1.1422953615181424 1.090257198813146 1.1068082172842677 1.1302125774303022 1.0899612743699694 1.076036250554895 1.0885373000361682 1.0137340776685775 1.0 13.529140988507635 -10.559847435249724 0.6610045349778707 0.9934362370932955 1.0916491886930952 0.48691633695531955 0.03210206543159367 0.5724180185414306 0.404219346790911 0.031245712559333873 0.006800357806657076 2.7551964154480294e-11 10.559847435249724 0.0982129515997997 AYQQKPYPS(ph)PK ddPTM_A549_PD325901_60min_R1 3 AYQQKPYPSPK 11 1 A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3 A0A2R8YDI1 CUX1 Homeobox protein cut-like 1 1 AYQQKPYPS(1)PK;AYQQKPY(0.004)PS(0.996)PK;AYQQKPY(0.003)PS(0.997)PK 99.48100000000001 7.6186e-05 284210600.0 11391.75 11426.93 12458.71 12458.68 13677.3 13959.599999999999 12844.67 13011.89 11986.86 12437.8 13908.46 True False 12548.232073836896 12389.917493914327 13304.232980909357 13228.224367884777 12716.653632123476 13845.917645890619 13333.480945723126 12752.357646319768 11483.093959628504 11652.475185351768 12197.807592992182 1.0287284807678094 1.0157495434698047 1.0907069060962098 1.0844755721089243 1.0425360078174524 1.135115268898429 1.0931047111600125 1.045463092371303 0.941406385703748 0.9552925881570952 1.0 13.574334243816807 -8.62108747031055 5.2677983263149954 0.9725315415878376 1.0706594084361456 0.6380796283741053 0.03425257010807951 0.10819312064778262 4.796712678836228 0.0064958464605781654 0.007370007477071597 2.3928337724041437e-09 8.62108747031055 0.09812786684830799 AYRPPS(ph)GEK ddPTM_A549_MK2206_60min_R1 2 AYRPPSGEK 9 1 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 AY(0.002)RPPS(0.998)GEK;AY(0.002)RPPS(0.998)GEK 62.258 0.0020247 89651000.0 26467.0 26297.0 25355.0 23791.0 35919.0 31338.0 26854.0 28028.0 37362.0 37889.0 38727.0 True False 30933.98254397641 27635.404976431488 28950.72026027763 29619.79606801856 30635.36268161157 34654.16635951916 31733.02419619372 32001.054832150105 28899.566654854014 29329.84858494667 29110.017089174093 1.0626576566140404 0.949343481722276 0.9945277658749399 1.0175121497621535 1.0523993368937163 1.1904550331716195 1.0901066838602136 1.0993141891370162 0.9927705149167245 1.0075517473967521 1.0 14.829228065951368 -4.356767535190386 16.278717502348716 1.0240070117634152 1.0384891565313525 0.0 0.0663009398554232 0.0 0.0 0.009504127334375693 0.0 4.3977695185927815e-05 4.356767535190386 0.0144821447679373 AYRPPS(ph)GEK ddPTM_A549_PD325901_60min_R1 2 AYRPPSGEK 9 1 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 AY(0.004)RPPS(0.996)GEK;AYRPPS(1)GEK 62.45399999999999 0.002 128542000.0 33211.0 34001.0 34341.0 32777.0 42564.0 33061.0 34357.0 35886.0 36565.0 39714.0 37261.0 True False 36582.556271354006 36866.383596519896 36671.586769208705 34801.56084803201 39574.45147782847 32791.762177339624 35664.47443587178 35170.2255779776 35028.30020821271 37206.45126236635 32678.133216940052 1.1194812148078868 1.1281667576227608 1.1222056818777666 1.064980077564259 1.211037705706929 1.0034772170015105 1.091386530531176 1.0762617724976307 1.0719186428328273 1.1385733394060238 1.0 14.996037949459366 -14.999999999467505 0.08402182802327042 0.6484513490192245 1.197666148262832 0.0 0.06120944819464932 87.2650334180428 0.539351420803712 5.560379358500478 0.5139872104432458 1.000000001226115e-15 14.999999999467505 0.5492147992436074 AYRPPS(ph)GEKWSK ddPTM_A549_MK2206_60min_R1 1 AYRPPSGEKWSK 12 2 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 AY(0.018)RPPS(0.98)GEKWS(0.002)K 44.806999999999995 0.011564 5104200.0 2810.4 2504.2 2143.7 2454.2 4125.0 2470.8 2142.1 2210.7 3902.5 4039.6 4995.0 True False 3284.7268123168947 2631.6530836969896 2447.708894575318 3055.479110173226 3518.2179643544596 2732.2584160157 2531.2918422084826 2524.0734949848083 3018.589981011933 3127.0515543759534 3754.6036450131596 0.8748531463979288 0.7009136869060292 0.6519220471717032 0.8137953826981162 0.9370411092599172 0.7277088807082654 0.6741835041817339 0.6722609717638949 0.803970343186878 0.8328579658546071 1.0 11.874444902240526 -10.13077856912236 0.7971517198829802 0.989547139937096 0.7572839167479026 0.21898981556683395 0.09742286402588288 0.37368547729516693 0.4679954687462565 0.0453063649813507 0.01837764590663582 7.399824688970325e-11 10.13077856912236 -0.23226322318919335 AYRPPS(ph)GEKWSK ddPTM_A549_PD325901_60min_R1 1 AYRPPSGEKWSK 12 2 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 AYRPPS(1)GEKWSK 71.692 0.00048318 7626800.0 3935.0 3526.6 3636.2 4260.6 3636.1 5082.7 3572.6 3334.9 5147.4 4661.8 5257.8 True False 4334.478303206106 3823.798958603774 3882.974398246898 4523.76758547534 3380.7128798640197 5041.308176363816 3708.5572480017345 3268.3828033215595 4931.072678565675 4367.453152412234 4611.123931940292 0.9400047292552864 0.8292552998016638 0.8420884919944019 0.981055302838457 0.7331646101390873 1.0932927092771736 0.8042631910873905 0.7088039383808695 1.0693862822487084 0.9471558814890657 1.0 12.170902725860403 -8.795866608703472 24.999832138565313 1.032765781718219 0.8692966871069093 0.23715867964641169 0.10798588589899573 142.3037465752731 103335.30759270834 0.017240957056864497 0.018354822195520388 1.6000494000201506e-09 8.795866608703472 -0.16346909461130965 AYS(ph)DHDDRWETK ddPTM_A549_PD325901_60min_R1 3 AYSDHDDRWETK 12 1 A0A2R8Y4Z8;Q9Y3X0 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 AYS(1)DHDDRWETK;AYS(1)DHDDRWETK;AYS(1)DHDDRWETK 194.55 9.4847e-25 82585000.0 14429.8 13314.7 11827.1 13894.099999999999 13352.7 12904.2 9808.7 10626.599999999999 16092.9 15158.2 17295.7 True False 15894.702673342674 14436.776496943718 12629.758128129886 14752.30700120944 12414.852416314272 12799.11247357387 10181.975446026594 10414.644126593574 15416.571377567248 14201.108665085407 15168.438546475667 1.0478799531436116 0.9517641814422653 0.8326340308155427 0.9725659603003162 0.8184660786458352 0.8437989470279192 0.6712606188718311 0.6865996189840766 1.0163584953277365 0.9362274581904796 1.0 13.888784960375018 -8.862678629032064 24.290496747938125 1.0077283869042284 0.8521029681273771 0.21638536229637928 0.10858381888946768 8.847163403556788 2106.973638299513 0.01941175446257443 0.02066534398908272 1.3718965721616233e-09 8.862678629032064 -0.15562541877685132 AYS(ph)FCGTVEYMAPEVVNR ddPTM_A549_MK2206_60min_R1 6 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 AYS(0.996)FCGT(0.004)VEYMAPEVVNR;AY(0.001)S(0.861)FCGT(0.133)VEY(0.005)MAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AY(0.001)S(0.997)FCGT(0.002)VEYMAPEVVNR;AYS(0.999)FCGTVEYMAPEVVNR 143.14 1.0955999999999999e-16 16925370.0 4377.53 5564.53 4582.77 4200.54 5832.55 5039.72 4721.59 4399.099999999999 7526.200000000001 7112.610000000001 6721.7 True False 5116.350043666943 5847.740808970692 5232.6756965960385 5229.672488569404 4974.589621332268 5573.0198253046165 5579.441785749099 5022.685896678731 5821.5277168717475 5505.866461077819 5052.516380517508 1.0126340338837054 1.1573917566144996 1.0356573442835781 1.0350629458095395 0.9845766439301957 1.1030186555741153 1.1042896975581147 0.9940959154622827 1.1522036305155874 1.08972758253856 1.0 12.302786378566072 AYS(ph)FCGTVEYMAPEVVNR ddPTM_A549_PD325901_60min_R1 2 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 AYS(1)FCGTVEYMAPEVVNR;AYS(0.968)FCGT(0.032)VEYMAPEVVNR 170.11 2.9982999999999996e-30 22595000.0 2728.8 3097.7 3520.4 2676.3999999999996 2796.2200000000003 3901.0 3465.1000000000004 3559.6000000000004 2862.6 3566.1 3864.9 True False 3005.8257671636125 3358.7540503790947 3759.315513884931 2841.715149454582 2599.823153635316 3869.2315493724304 3596.9662766754745 3488.60098554782 2742.294876959651 3340.935837405565 3389.5418016196986 0.8867941282586552 0.9909168397846895 1.109092536368348 0.8383773724509499 0.7670131556993885 1.141520528681343 1.0611954320659676 1.029224948304454 0.8090458939462675 0.9856600192418612 1.0 11.72687454763765 -8.729010333574823 24.99845590072745 0.9098271067410452 0.9793506710703355 0.021362873484586764 0.11678180480168039 456.9871561014792 352275.71895536757 0.02153525710648923 0.02441775189858511 1.866335282845298e-09 8.729010333574823 0.0695235643292903 AYS(ph)FDR ddPTM_A549_MK2206_60min_R1 1 AYSFDR 6 0 Q58EX7-2;Q58EX7 Q58EX7-2 PLEKHG4 Puratrophin-1 1 AYS(1)FDR 64.265 0.058846 1827000.0 814.87 1262.1 693.39 632.97 1007.7 700.44 667.16 831.93 945.0 1228.1 1315.6 True False 952.4001343412574 1326.3354991350404 791.7231284272893 788.0476784151032 859.4686648921179 774.5600958855583 788.3743361410819 949.8586251787722 730.9590088549074 950.671357047507 988.9002112871491 0.9630902324326706 1.3412227887065438 0.800609727241119 0.7968930225926265 0.8691156651422255 0.7832540503529609 0.7972233468480471 0.9605201964133868 0.7391635682871316 0.9613420506909554 1.0 9.949681137508785 -5.7781020788671285 24.99996766195886 0.8589132933870975 1.152156574385915 0.4992881299559593 0.1141901147757106 131.59611826556082 197441.70225204938 0.016588625453650287 0.051779483217916665 1.6668553800178919e-06 5.7781020788671285 0.29324328099881747 AYS(ph)GSDLPSSSSGGANGTAGGGGGAR ddPTM_A549_MK2206_60min_R1 1 AYSGSDLPSSSSGGANGTAGGGGGAR 26 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 AYS(0.5)GS(0.5)DLPSSSSGGANGTAGGGGGAR 337.22 2.5318999999999984e-232 21795000.0 877.13 1550.6 1161.4 1514.2 2192.1 1834.7 1831.1 1890.8 2127.3 2503.0 2844.4 True False 1025.1681002304006 1629.51891685191 1326.1039838409176 1885.1790679750216 1869.6449938573105 2028.8467362247054 2163.787167857687 2158.8266903321446 1645.469946600046 1937.5705615910028 2138.0569785536395 0.4794858652101545 0.7621494343683267 0.6202379062591705 0.8817253641436227 0.8744598542561268 0.9489207989195811 1.0120343796082805 1.009714292924296 0.7696099604011393 0.9062296192413626 1.0 11.062084585607032 -5.804838613765952 0.9206409112337353 0.9130981708090716 0.4847529350390776 0.6980386955409721 0.08959232216137672 0.5960819445457234 0.6169050266079228 0.016785868013889666 0.21022699710775522 1.5673333916707416e-06 5.804838613765952 -0.428345235769994 AYS(ph)GSDLPSSSSGGANGTAGGGGGAR ddPTM_A549_PD325901_60min_R1 2 AYSGSDLPSSSSGGANGTAGGGGGAR 26 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 AYS(0.794)GS(0.206)DLPSSSSGGANGTAGGGGGAR;AYS(0.927)GS(0.073)DLPSSSSGGANGTAGGGGGAR 426.53 0.0 62332000.0 5879.0 6210.6 6305.5 6456.6 7864.8 6911.6 7068.5 7565.4 7984.8 7925.8 7994.700000000001 True False 6475.831752108943 6733.9890581026 6733.429148051765 6855.409517997487 7312.403580087055 6855.3142211336735 7337.495635531616 7414.502162058511 7649.226623889968 7425.363635374509 7011.4025825788485 0.9236143090969228 0.9604339472439459 0.960354090176228 0.9777515179389419 1.0429302117462347 0.9777379262413193 1.046508961525474 1.0574920031665618 1.0909695362374303 1.0590411187947222 1.0 12.775487358929935 -6.502957441654162 0.7934322180371406 1.0441156574264052 0.9303116739807659 0.6835301111169318 0.028474949370461543 0.4846604458650014 0.5006416187614283 0.0063459179986352955 0.03351090545628244 3.140816460632617e-07 6.502957441654162 -0.11380398344563936 AYS(ph)LLR ddPTM_A549_PD325901_60min_R1 1 AYSLLR 6 0 Q8NAF0 Q8NAF0 ZNF579 Zinc finger protein 579 1 AYS(1)LLR 72.138 0.048593 2522500.0 724.93 851.37 592.06 920.22 955.84 771.1 784.93 872.81 894.18 861.77 877.34 True False 798.5243599347403 923.1179377832751 632.2407519460031 977.0598994287467 888.7050958689877 764.8204172573902 814.8009406801772 855.4011198438008 856.6007241947113 807.3576951294114 769.4327419164858 1.0378091760766428 1.1997383104389263 0.8216972290147571 1.2698444531943205 1.155013359134446 0.9940055518723997 1.0589631767562806 1.1117295550916988 1.1132886313898074 1.0492894975049578 1.0 9.587651412176983 -10.868962438999938 1.0851931241531556 0.999370996834136 1.0871336980959245 0.035114085688045305 0.11135893283531653 1.105281904983974 2.2841822122730515 0.07421724023239343 0.017453150997146987 1.352189505490228e-11 10.868962438999938 0.08776270126178853 AYS(ph)NSIVR ddPTM_A549_MK2206_60min_R1 2 AYSNSIVR 8 0 Q9H1Z4 Q9H1Z4 WDR13 WD repeat-containing protein 13 1 AYS(0.963)NS(0.037)IVR;AYS(0.651)NS(0.349)IVR 105.98 0.00059206 6549100.0 1120.9 1210.4 1109.6 1176.2 1537.9 1114.3 1451.9 1339.3 1850.3 1692.6 1880.4 True False 1310.0805166261061 1272.004189963595 1266.9579649301554 1464.369052801625 1311.676947243811 1232.2144863875242 1715.6914363019903 1529.1498764342298 1431.2100043219411 1310.240484438247 1413.444783600149 0.9268706721526352 0.8999319992703965 0.8963618385594937 1.0360284814747187 0.9280001330528611 0.871781126991733 1.2138369013128312 1.0818603557610302 1.0125687405181423 0.9269838480007453 1.0 10.46499980986712 AYS(ph)PEYR ddPTM_A549_MK2206_60min_R1 2 AYSPEYR 7 0 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AYS(0.993)PEY(0.007)R;AYS(1)PEYR 99.7 0.011354000000000001 147991000.0 6941.5 8213.9 6500.4 6016.799999999999 10082.5 6427.0 6456.3 6856.8 9936.599999999999 11219.1 10387.0 True False 8113.055496618892 8631.952425596479 7422.254465782243 7490.916270104418 8599.377606206983 7107.100874102677 7629.326138299153 7828.772398069313 7685.9759654896 8684.697517996647 7807.621233383721 1.0391200154445503 1.1055803256295391 0.9506422307022615 0.9594364334779535 1.1014081432943854 0.910277363829361 0.977163967134802 1.0027090408273334 0.9844196760757307 1.1123359162023299 1.0 12.930667350629815 -5.759034787199023 24.999984791914066 0.9895910106014969 1.0723501758476064 0.16442715145951103 0.05951046265477644 48.36195472849631 502773.31060037157 0.005780677499834964 0.020469503882576057 1.7416673594023596e-06 5.759034787199023 0.08275916524610949 AYS(ph)PEYR ddPTM_A549_PD325901_60min_R1 2 AYSPEYR 7 0 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AYS(0.997)PEY(0.003)R;AYS(0.997)PEY(0.002)R 86.744 0.013012000000000001 169371000.0 7421.6 8348.1 7155.8 7483.4 9477.599999999999 8319.0 8378.8 7813.900000000001 9266.7 9824.9 9742.1 True False 8175.035368506846 9051.623684659495 7641.435619321037 7945.632621965485 8811.926071945005 8251.252822155657 8697.659819055287 7658.045634614039 8877.252824817304 9204.55413727208 8543.883460260095 0.9568289884255958 1.0594273349772427 0.8943749823910185 0.929979049798931 1.0313724564399374 0.9657496922253748 1.0179984148321366 0.8963190650052373 1.039018482181762 1.0773267425854933 1.0 13.060676253263924 AYS(ph)SPSTTPEAR ddPTM_A549_MK2206_60min_R1 1 AYSSPSTTPEAR 12 0 G3V2R1;Q9UPU9-2;Q9UPU9-3;Q9UPU9 G3V2R1 SAMD4A Protein Smaug homolog 1 1 AYS(0.324)S(0.324)PS(0.324)T(0.027)T(0.001)PEAR 179.6 1.4414e-16 23620000.0 3266.5 3822.7 3015.3 3365.6 4193.7 3597.4 2625.2 3596.9 4990.3 4852.8 4937.3 True False 3817.805341742506 4017.259101928153 3442.9148807262955 4190.172151087523 3576.812285360796 3978.0744802391446 3102.164858860793 4106.771590044265 3860.0050178715796 3756.5491095840284 3711.2321474521455 1.028716391229669 1.082459663614981 0.9277012980958207 1.1290514806421317 0.9637802603688826 1.0719012775770962 0.835885424464893 1.106579008500901 1.0400871905902116 1.0122107592118683 1.0 11.857682532936206 AYS(ph)TENYSLESQK ddPTM_A549_PD325901_60min_R1 1 AYSTENYSLESQK 13 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AYS(0.984)T(0.015)ENYS(0.001)LESQK 73.91 0.0011875 20507000.0 2995.9 2682.2 3114.9 3373.8 3638.4 3287.3 3369.6 3624.7 3780.6 4031.4 4376.3 True False 3300.041562534986 2908.238407181717 3326.2958454153413 3582.1919635442678 3382.8513357985885 3260.5293187008397 3497.831971915872 3552.402514977861 3621.7145293906447 3776.856715996973 3838.0428436513976 0.8598240553759495 0.7577399538393134 0.8666645946689862 0.9333381907056251 0.8814000972902758 0.849529161482437 0.9113582402295803 0.9255765658932074 0.9436357739938763 0.9840579873266307 1.0 11.906155100931809 -2.000000004617571 0.0833344612645882 1.1014266024467367 0.30975676550663905 0.6787142238802673 0.03693452652637602 56.25429699568189 0.33036021179970393 0.4430019711797805 5.1193559217252185 0.009999999893676495 2.000000004617571 -0.7916698369400976 AYSFCGT(ph)VEYMAPEVVNR ddPTM_A549_PD325901_60min_R1 1 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 AYS(0.119)FCGT(0.789)VEY(0.091)MAPEVVNR 122.75 9.669e-11 16127000.0 1787.9 2003.5 2442.1 2077.5 2683.1 1946.5 2230.9 2176.3 2383.7 2712.1 2930.1 True False 1969.4062918175848 2172.3419762838626 2607.8355915402753 2205.8224566551703 2494.648312192501 1930.6483493600174 2315.7981202953215 2132.8919892256768 2283.521378540041 2540.857543150117 2569.716275434261 0.7663905586171263 0.845362578371324 1.014834056378295 0.8583914410093403 0.970787450755016 0.7513079820587405 0.9011882527396805 0.8300106940270031 0.8886278226004326 0.9887696814780584 1.0 11.32739336368425 -10.294661155704164 0.7476311862541678 0.9989135001528536 0.8718660879509826 0.29515830616681304 0.07386025014962895 0.6382728339086152 0.6669163950086381 0.043980166877044875 0.014429870378137978 5.0738642581499e-11 10.294661155704164 -0.127047412201871 AYSFCGTVEY(ph)MAPEVVNR ddPTM_A549_MK2206_60min_R1 1 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 AYS(0.001)FCGT(0.003)VEY(0.996)MAPEVVNR 119.27 1.3261000000000002e-10 16140000.0 1517.6 1420.6 1296.8 923.98 1112.2 1860.9 917.05 1454.7 2236.6 1685.7 1860.0 True False 1773.7337782422858 1492.9024721268052 1480.7057398354582 1150.355141479038 948.5968533224316 2057.819202834553 1083.6661145125288 1660.908179831909 1730.0136711162816 1304.8991992305043 1398.1106666115072 1.2686647921377692 1.0677999301335976 1.0590762056226424 0.8227926221799485 0.6784848123800332 1.4718571655146087 0.775093231452791 1.1879661742781233 1.2373939434345222 0.9333304082380601 1.0 10.44926284555614 AYSFCGTVEY(ph)MAPEVVNR ddPTM_A549_PD325901_60min_R1 1 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 AYS(0.014)FCGT(0.004)VEY(0.982)MAPEVVNR 106.16 1.7640000000000001e-09 18542000.0 2581.5 2556.1 2859.6 2438.2 2162.6 2226.2 2213.2 2771.1 2256.3 2755.3 3076.4 True False 2843.5719796001445 2771.511517633729 3053.669652171726 2588.8020764460357 2010.7064365649817 2208.070565294258 2297.424537109509 2715.8282366141057 2161.4755574946075 2581.329887777559 2698.0223029063723 1.053946802640209 1.0272381791092655 1.1318177944200987 0.959518412304197 0.7452519700815675 0.8184033775093975 0.851521699666704 1.006599624357646 0.8011333172324839 0.9567489064107775 1.0 11.397686558878375 -6.5158346943581105 24.7194498263833 0.8901300887161405 1.0631319159168853 0.5084848380902136 0.08074117850052746 211.64737095283925 742725.6158103691 0.013481546964435756 0.028968240027359975 3.0490553316496485e-07 6.5158346943581105 0.17300182720074475 AYSGS(ph)DLPSSSSGGANGTAGGGGGAR ddPTM_A549_MK2206_60min_R1 1 AYSGSDLPSSSSGGANGTAGGGGGAR 26 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 AYS(0.294)GS(0.706)DLPSSSSGGANGTAGGGGGAR 285.46 1.4059999999999997e-153 21571000.0 876.82 1158.4 1163.2 942.77 1290.0 1485.5 1435.4 1384.7 2144.3 2128.2 2069.6 True False 1024.8057798091731 1217.3576120735543 1328.1592509073148 1173.7486923225529 1100.2427088526663 1642.6946240049062 1696.19359988145 1580.9854654658996 1658.6194737434678 1647.4381419009078 1555.6612019457925 0.6587589756223045 0.7825338901239587 0.8537586778188448 0.7545014884053478 0.7072508509413893 1.0559462574179095 1.0903361205896773 1.0162787781095473 1.0661829655897421 1.0589954546917557 1.0 10.603312183358124 -7.265584252266148 24.939563824880853 1.0371998320654268 0.7589558686919442 0.8931385005038163 0.05097919104890146 86.6001360041398 521070.34159017896 0.007933198516704373 0.012960929036399288 5.425199933192029e-08 7.265584252266148 -0.27824396337348256 AYSS(ph)PSTTPEAR ddPTM_A549_MK2206_60min_R1 1 AYSSPSTTPEAR 12 0 G3V2R1;Q9UPU9-2;Q9UPU9-3;Q9UPU9 G3V2R1 SAMD4A Protein Smaug homolog 1 1 AYS(0.013)S(0.978)PS(0.008)TTPEAR 178.85 2.2848e-16 22961000.0 3994.0 4900.7 3998.1 3893.2 5921.6 4438.3 3902.2 3848.9 6262.9 6418.0 6348.9 True False 4668.089556075177 5150.124697417875 4565.090698979139 4847.0341747723905 5050.540484296088 4907.957960094899 4611.179229105052 4394.493361761899 4844.36314979619 4968.169342505413 4772.29290927408 0.9781649292740597 1.079171961010513 0.9565822521303584 1.0156615000208946 1.0583047981990554 1.028427645452604 0.9662397754639217 0.9208347947842858 1.0151018057550605 1.0410445119264753 1.0 12.22046687878252 -7.6995241853781495 24.999890376798792 0.9966788752442889 1.0208482018735419 0.10152574220656652 0.04246774474206391 148.92349492864423 60130.82031249937 0.006227433814096947 0.009236775396885779 1.99744952959583e-08 7.6995241853781495 0.024169326629252974 AYSSFGGGRGS(ph)R ddPTM_A549_MK2206_60min_R1 1 AYSSFGGGRGSR 12 1 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 1 AYS(0.001)S(0.003)FGGGRGS(0.996)R 49.298 0.0087805 29139000.0 1750.1 2556.3 2036.2 1856.2 2938.9 1950.0 2056.6 2198.0 3605.4 3208.3 3586.9 True False 2045.4740941630362 2686.404751159898 2324.9637781099327 2310.9690833279833 2506.5917031372896 2156.3477056947586 2430.2575989384063 2509.57323109269 2788.782656640722 2483.542801738879 2696.1737365961353 0.7586581185029292 0.996376722574054 0.8623197187007512 0.8571291426662789 0.9296847859299345 0.7997806952964032 0.9013727735537389 0.9307906226625349 1.0343482761468865 0.9211360410602847 1.0 11.39669774885612 -8.528601873392827 2.657669556847528 1.0162517942313556 0.8755003817887009 0.33365002444935643 0.06610274654274063 0.1454562771637289 2.0670982574685315 0.009507998578265904 0.011137453265385407 2.9607253801975192e-09 8.528601873392827 -0.14075141244265466 AYSSFGGGRGS(ph)R ddPTM_A549_PD325901_60min_R1 3 AYSSFGGGRGSR 12 1 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 1 AYSSFGGGRGS(1)R;AYSS(0.001)FGGGRGS(0.999)R;AYSSFGGGRGS(1)R 88.101 0.00012659 142396000.0 12796.199999999999 13353.0 13399.5 13541.3 15474.599999999999 15408.0 14382.400000000001 14871.199999999999 15281.400000000001 15316.0 16790.9 True False 14095.26080393545 14478.304172357572 14308.870647739202 14377.715346476372 14387.71748047187 15282.522356506111 14929.730102351268 14574.582249769286 14639.175900499979 14348.945146155093 14725.725746284816 0.9571861548142423 0.9831980047577847 0.9716920506515081 0.9763671817739615 0.9770464103680444 1.0378111489928958 1.0138536028431686 0.9897360918490784 0.9941225412400015 0.9744134444290611 1.0 13.84605111749412 -7.03228668811095 24.995700836058294 1.000737111495434 0.9733521025617975 0.4458437541669482 0.015882828026707797 428.9941611774644 332118.1739032014 0.002079676714249242 0.0036037799480453858 9.283533563461663e-08 7.03228668811095 -0.02738500893363649 AYST(ph)ENYSLESQK ddPTM_A549_PD325901_60min_R1 1 AYSTENYSLESQK 13 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AYS(0.244)T(0.755)ENYSLESQK 206.66 2.5020999999999998e-31 17817000.0 8593.9 8318.1 8651.5 7360.3 9540.1 9796.0 7991.9 9158.2 9514.9 9105.6 9936.3 True False 9466.346401505192 9019.095479374484 9238.64281569579 7814.929014545875 8870.036287558301 9716.224623853454 8296.036127835489 8975.532516531084 9115.021841956052 8530.670862028579 8714.19809139533 1.086312969044456 1.0349885766632065 1.060182786620184 0.8968041502594001 1.0178832515084608 1.1149878074779542 0.9520137183967912 1.0299894978740274 1.0459966305971982 0.9789392865021084 1.0 13.089152193672044 -8.934353036389542 0.002572573122431401 8.918993461803906e-05 2.0438991953786823 0.04093831696569572 0.057502523733003526 73818.76655961703 136.05162022733575 54144.98188932231 53938.57190689713 1.1631801001593331e-09 8.934353036389542 2.0438100054440644 AYSTENYS(ph)LESQKK ddPTM_A549_MK2206_60min_R1 2 AYSTENYSLESQKK 14 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AYST(0.001)ENY(0.001)S(0.996)LES(0.003)QKK;AYS(0.002)T(0.014)ENY(0.001)S(0.982)LES(0.002)QKK 61.167 0.0027901999999999996 6449400.0 3515.4 3615.2999999999997 4026.3 3432.0 5311.3 4664.3 4067.1 4048.6 6048.3 6127.9 5976.700000000001 True False 4108.713576721752 3799.3033278051757 4597.289883019362 4272.8401540683335 4530.014805836565 5157.87313008824 4806.039424604884 4622.501448317496 4678.369707150405 4743.603133988616 4492.520441471504 0.9145675863360041 0.8456952789202518 1.0233208602860673 0.9511008819514208 1.0083459529797443 1.1481023174596403 1.0697868795964094 1.0289327580228924 1.04136859655958 1.0558890484279848 1.0 12.133309352836363 -5.961117741731966 1.3484435073201164 1.0318439369944035 0.8734741696297795 0.5507673560912927 0.05187785854587018 0.3268268724222998 0.9948047318430775 0.0077720509115574024 0.04945691140268587 1.0936598235709718e-06 5.961117741731966 -0.15836976736462394 AYSTENYS(ph)LESQKK ddPTM_A549_PD325901_60min_R1 1 AYSTENYSLESQKK 14 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AYST(0.002)ENYS(0.998)LESQKK 99.569 1.4407000000000001e-05 3869200.0 2672.2 3186.0 2940.8 2714.9 3370.1 3696.5 3894.7 3237.6 4481.6 3681.4 4414.5 True False 2943.4797768303306 3454.4954012679705 3140.380372466991 2882.593207014741 3133.395802213837 3666.3969295706697 4042.9149397616166 3173.023528151933 4293.253937183809 3448.955775728344 3871.5444858211476 0.7602856657363253 0.8922783695032961 0.8111440754376149 0.7445589783539186 0.8093399969157915 0.9470114428487663 1.0442641055961215 0.8195756344199517 1.108925379240016 0.890847512758678 1.0 11.918693504137826 -7.627058136917364 1.045383680567828 1.0412196550326842 0.8005050699172014 0.35511020655487147 0.09143747590889097 0.24601371912186848 0.541293231188761 0.014805083068959455 0.02689628751742104 2.3601622684403237e-08 7.627058136917364 -0.24071458511548283 AYT(ph)HQVVTR ddPTM_A549_MK2206_60min_R1 9 AYTHQVVTR 9 0 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 1 AYT(1)HQVVTR;AYT(1)HQVVTR;AYT(1)HQVVTR;AYT(0.994)HQVVT(0.006)R;AYT(1)HQVVTR;AYT(1)HQVVTR;AY(0.001)T(0.999)HQVVTR;AY(0.001)T(0.999)HQVVTR;AY(0.001)T(0.998)HQVVTR 150.33 2.4171999999999998e-05 1451469900.0 21393.47 22071.73 21327.479999999996 19664.3 28799.949999999997 22730.92 20081.799999999996 23198.639999999996 32156.8 32719.6 31508.559999999998 True False 25004.16471587574 23195.086781018836 24352.037362913274 24482.05438276397 24563.515506063068 25136.290866836473 23730.403116970392 26487.11826285537 24873.336143857654 25328.2196352509 23684.114959983144 1.05573565903235 0.9793520602399298 1.0282012819165358 1.0336909115721247 1.0371303951009259 1.0613143412496915 1.0019543967366082 1.1183495058864643 1.0502117637025419 1.0694180330591052 1.0 14.531632141116217 -5.98290719744637 24.96581702107371 1.0334788174423943 1.0141020675771144 0.006983248385800667 0.0364546880901365 677.9561840506997 990214.6213165186 0.00502066588811559 0.015606335410946404 1.0401424057211814e-06 5.98290719744637 -0.01937674986527993 AYT(ph)HQVVTR ddPTM_A549_PD325901_60min_R1 9 AYTHQVVTR 9 0 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 1 AYT(1)HQVVTR;AYT(0.997)HQVVT(0.003)R;AYT(1)HQVVTR;AYT(0.998)HQVVT(0.002)R;AY(0.001)T(0.999)HQVVTR;AY(0.004)T(0.996)HQVVTR;AYT(1)HQVVTR;AY(0.004)T(0.995)HQVVTR;AY(0.003)T(0.997)HQVVTR 145.23 3.4056e-05 1963477600.0 32848.9 35801.5 36571.4 32906.74 39472.5 33186.0 34645.4 37572.4 38695.700000000004 40032.7 37474.9 True False 36183.69614591794 38818.61805037518 39053.35512569348 34939.31459317108 36700.08777273246 32915.74421878325 35963.849655690305 36822.98900702242 37069.45429692156 37505.02848997669 32865.72487296386 1.1009553656820001 1.1811277006796925 1.1882700070254564 1.0630927730400679 1.1166675286971335 1.001521930400523 1.0942661327173415 1.120407024319549 1.127906183119539 1.1411593273827116 1.0 15.004296184440445 -14.999999999999279 0.24768810894374438 0.2988533126015406 1.1243272429818016 0.0 0.06472330191852167 33.32941416385231 0.42754196667102223 11.474959940035653 0.0269110940934679 1.0000000000016606e-15 14.999999999999279 0.8254739303802611 AYT(ph)NFDAERDALNIETAIK ddPTM_A549_MK2206_60min_R1 1 AYTNFDAERDALNIETAIK 19 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 AY(0.481)T(0.519)NFDAERDALNIETAIK 40.515 0.038801 599750.0 290.31 418.15 629.21 613.48 552.39 406.03 423.21 422.49 667.45 590.07 955.22 True False 339.3072306019492 439.43204893694434 718.4414393598623 763.7826275401638 471.13416274660807 448.99582509909897 500.1017788810284 482.37925132136064 516.2736406986323 456.772777178587 718.0125112691627 0.4725645100559431 0.6120116878746332 1.000597382474494 1.0637455692660531 0.6561642803602807 0.6253314782850393 0.6965084466244827 0.6718256907093506 0.7190315385814996 0.6361626991306781 1.0 9.48786517280455 -10.598443479023757 0.8542076612319758 1.002377961079014 0.7321457416001756 0.0 0.19307185590514375 0.7138414037758303 0.9186541442597798 0.12104905318450974 0.03211708463513323 2.5209052398834045e-11 10.598443479023757 -0.27023221947883835 AYT(ph)PPPPLGPHPNLGK ddPTM_A549_MK2206_60min_R1 2 AYTPPPPLGPHPNLGK 16 0 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 AYT(1)PPPPLGPHPNLGK;AY(0.003)T(0.997)PPPPLGPHPNLGK 106.93 6.7876e-07 29720000.0 7566.4 7839.5 7867.0 8038.5 10238.8 7858.9 8361.7 8517.7 12896.5 11988.0 12947.3 True False 8843.423339280733 8238.497064788175 8982.658895192437 10007.932860861982 8732.686083256347 8690.52358168438 9880.912654402062 9725.110059362234 9975.463341478639 9279.902473972415 9732.128082698471 0.9086834106717466 0.846525754160014 0.9229902051085392 1.0283396165586671 0.8973048863568794 0.8929725860404746 1.015287979200366 0.9992788809110812 1.0250032939057556 0.9535327109463334 1.0 13.248539592100158 -7.769158206480964 24.99537188014423 1.0112054330554432 0.9175277187343481 0.44387183912917294 0.04496618286639318 103.0595766551019 333730.9239643391 0.0066888669420221356 0.00933590246060581 1.7015385524080107e-08 7.769158206480964 -0.09367771432109506 AYT(ph)PPPPLGPHPNLGK ddPTM_A549_PD325901_60min_R1 2 AYTPPPPLGPHPNLGK 16 0 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 AY(0.001)T(0.999)PPPPLGPHPNLGK;AYT(1)PPPPLGPHPNLGK 133.93 2.6824e-10 53601000.0 20229.8 21708.0 21003.0 21498.8 25867.0 24663.0 22233.0 25052.0 23455.0 23938.0 26683.0 True False 22283.514403608347 23537.409344232612 22428.389881299052 22826.732048682647 24050.19115630555 24462.152704991582 23079.08898136443 24552.318207086202 22469.26791695962 22426.55059471537 23401.160157473256 0.9522397288705371 1.0058223261514598 0.9584306816573133 0.9754530072472855 1.027734992387761 1.0453393139647178 0.9862369568883973 1.0491923495188473 0.9601775196510489 0.9583520835634023 1.0 14.514292435509534 -5.247494529717097 23.270114246879167 0.991722055034759 0.9522396573512274 0.12103871779252695 0.03198524628768002 1590.6427993692344 2654220.920183734 0.004424747042583124 0.11227334965132196 5.655948811596907e-06 5.247494529717097 -0.03948239768353157 AYT(ph)PSKR ddPTM_A549_MK2206_60min_R1 1 AYTPSKR 7 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 AYT(0.993)PS(0.007)KR 59.8 0.018175 6461300.0 1198.2 1432.2 968.06 1509.9 1611.2 1342.8 1040.3 1162.3 1775.9 1606.9 1641.6 True False 1400.4268668225534 1505.0928625791992 1105.3454646091257 1879.825567781986 1374.1946143437337 1484.8942047214991 1229.3090441386878 1327.0595843944639 1373.661485529555 1243.9001739594823 1233.945414144865 1.1349180042887566 1.2197402294511073 0.8957814923888994 1.523426843872767 1.1136591607628468 1.2033710630146017 0.996242645782358 1.0754605261968802 1.1132271085763663 1.00806742316192 1.0 10.269062860280437 -7.751477217229849 24.985171344371164 1.052924044617386 1.182968111153922 0.2001319384313206 0.14124110240141058 272.7421180097039 684037.0541675427 0.020341719047729193 0.029971744767420462 1.7722410131609478e-08 7.751477217229849 0.1300440665365361 AYT(ph)PSKR ddPTM_A549_PD325901_60min_R1 1 AYTPSKR 7 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 AY(0.001)T(0.998)PS(0.001)KR 66.29899999999999 0.015053 11749000.0 3199.2 2816.1 2952.7 3438.9 3457.7 3798.1 3417.1 3581.3 3618.2 3530.9 3870.0 True False 3523.980428873437 3053.42263010381 3153.087978027504 3651.3130426914386 3214.8430804174304 3767.169532856042 3547.13961040887 3509.868162024499 3466.1396366294307 3307.9583714128353 3394.0145339512587 1.0382926748315584 0.899649250042858 0.9290142827870358 1.0758094893720556 0.9472095797641622 1.1099450209101969 1.0451162111787853 1.0341346882620344 1.0212506758461652 0.9746447277471619 1.0 11.728777027508047 AYT(ph)PVVVTQWYR ddPTM_A549_MK2206_60min_R1 2 AYTPVVVTQWYR 12 0 Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 Q5QPR3 CDK11A Cyclin-dependent kinase 11A 1 AYT(0.972)PVVVT(0.028)QWYR;AYT(0.983)PVVVT(0.017)QWYR 135.02 4.2077e-08 16064700.0 4941.6 4417.0 3334.0 3115.6000000000004 6286.9 4574.9 4653.1 4201.3 6378.8 6127.6 6577.7 True False 5775.621269479497 4641.8064334676155 3806.811332982281 3878.9221398646 5362.105338206072 5059.012881427155 5498.508039298016 4796.847140941638 4934.01198485046 4743.370904196974 4944.275554715326 1.1681430789130112 0.9388243802554154 0.7699431981196412 0.7845279044298604 1.0845077866043014 1.0232060946931658 1.112095792083053 0.970181998931454 0.9979241509193238 0.9593662108240003 1.0 12.271543434527187 -6.779270716885486 24.988319961840816 1.0122710238153987 0.9066487423869832 0.1828963824990968 0.1058498281594128 308.5460651664596 432387.0709274113 0.01508330176856297 0.02854737010119562 1.6623760874189423e-07 6.779270716885486 -0.10562228142841545 AYT(ph)PVVVTQWYR ddPTM_A549_PD325901_60min_R1 2 AYTPVVVTQWYR 12 0 Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 Q5QPR3 CDK11A Cyclin-dependent kinase 11A 1 AY(0.001)T(0.985)PVVVT(0.013)QWY(0.002)R;AYT(0.722)PVVVT(0.277)QWYR 82.705 0.0006646 20718000.0 4773.4 4917.799999999999 5060.1 4640.5 4904.299999999999 4320.1 4480.3 4981.299999999999 5270.5 4652.6 6014.6 True False 5257.992054008646 5332.240265020597 5403.508814853182 4927.133145659842 4559.8388869165055 4284.91853792459 4650.8002682142305 4881.9440637457465 5048.999213657461 4358.834041982314 5274.842329690761 0.9968055394590148 1.0108814504287185 1.0243924798354995 0.9340815967002934 0.8644502720489519 0.8123311124971188 0.8816946512383972 0.9255146900347164 0.9571848593915147 0.8263439491731409 1.0 12.36491225552971 -6.262475088881927 24.731708980830028 0.9458488418220004 1.0107119872969332 0.17543993922177636 0.06525701966161519 119.7466591511745 2859487.8539404497 0.00980387021785417 0.024049856797497056 5.464178914963541e-07 6.262475088881927 0.06486314547493288 AYTDFQNNHS(ph)SPKPTTLNTAGAPVVVISNK ddPTM_A549_MK2206_60min_R1 2 AYTDFQNNHSSPKPTTLNTAGAPVVVISNK 30 1 O43167-2;O43167 O43167-2 ZBTB24 Zinc finger and BTB domain-containing protein 24 1 AYT(0.004)DFQNNHS(0.484)S(0.484)PKPT(0.009)T(0.009)LNT(0.009)AGAPVVVISNK;AY(0.001)T(0.007)DFQNNHS(0.481)S(0.481)PKPT(0.01)T(0.01)LNT(0.01)AGAPVVVISNK 72.87899999999999 2.4131e-05 5310200.0 1552.33 1732.74 1949.45 1586.15 1839.8000000000002 1668.4499999999998 1752.21 1761.95 2287.14 2481.5 2355.24 True False 1814.3253531753091 1820.9290648690696 2225.911323659958 1974.7568212049803 1569.1678571683224 1845.004271572525 2070.563876026388 2011.71180824557 1769.1064418120775 1920.927426523401 1770.3689066828406 1.0248289756595592 1.0285591087797425 1.257314967099525 1.1154493358703998 0.8863507776514722 1.0421580861525237 1.1695663362649233 1.1363235089882686 0.9992868916382357 1.085043585702521 1.0 10.789834302815821 -8.789212731247506 23.774927889643944 0.9996632097756003 1.0827017218719424 0.0405124372806287 0.09329872566128995 179.46415494865911 153626.2853823558 0.016097250878450126 0.017139312323649653 1.6247527052599084e-09 8.789212731247506 0.08303851209634205 AYTDFQNNHS(ph)SPKPTTLNTAGAPVVVISNK ddPTM_A549_PD325901_60min_R1 2 AYTDFQNNHSSPKPTTLNTAGAPVVVISNK 30 1 O43167-2;O43167 O43167-2 ZBTB24 Zinc finger and BTB domain-containing protein 24 1 AY(0.066)T(0.073)DFQNNHS(0.429)S(0.352)PKPT(0.038)T(0.038)LNT(0.004)AGAPVVVISNK;AY(0.002)T(0.094)DFQNNHS(0.444)S(0.444)PKPT(0.006)T(0.006)LNT(0.006)AGAPVVVISNK 105.52 8.6812e-15 10704500.0 4958.3 5611.0 5804.4 6116.4 7842.700000000001 5594.5 6372.5 6840.5 5063.200000000001 6897.2 5963.200000000001 True False 5461.6629658924585 6083.858661806213 6198.321488692673 6494.196136647741 7291.855807846194 5548.9402468505605 6615.008974665804 6704.0608612315655 4850.411311752293 6461.709614916484 5229.764203839319 1.0443421066446736 1.1633141427944071 1.1852009473280476 1.2417760884668885 1.3942991545379875 1.0610306756807364 1.2648770990113738 1.2819049960818356 0.9274627158508347 1.2355642363708785 1.0 12.352530185317763 -8.766693768434855 24.99994909955323 0.9657462688757616 1.2073577959342185 0.13051462493331256 0.12462842821814905 65.55780304962639 311917.9717372889 0.016219344571332683 0.01751855235285471 1.711221513544344e-09 8.766693768434855 0.2416115270584569 AYTEDRNS(ph)LER ddPTM_A549_PD325901_60min_R1 2 AYTEDRNSLER 11 1 Q8IZ41 Q8IZ41 RASEF Ras and EF-hand domain-containing protein 1 AYTEDRNS(1)LER;AYTEDRNS(1)LER 62.378 0.0020334 4901900.0 1123.8 1447.33 1146.17 960.61 1352.53 986.4499999999999 1129.3700000000001 1149.0 1463.15 1409.99 1519.44 True False 1237.8873487021654 1569.301578505076 1223.955988680119 1019.944697996401 1257.5329587751944 978.4166782564549 1172.3487933649778 1126.0822936269371 1401.6588937411839 1320.9629907696008 1332.5585125237471 0.9289553419742275 1.1776605407990366 0.9185007466291708 0.7654033113072961 0.9436981167855354 0.7342391865430516 0.8797728447546019 0.8450527935874558 1.0518554199069028 0.9912983019918686 1.0 10.37998316764614 -8.769256712386516 24.996936777635597 1.024487287793472 0.8999707783302143 0.1787491987371541 0.10940193867664506 208.31484747685224 666111.8154050212 0.019664529227204516 0.021123553413021506 1.7011526562115925e-09 8.769256712386516 -0.12451650946325776 AYTNFDAER ddPTM_A549_MK2206_60min_R1 2 AYTNFDAER 9 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 234.81 8.2163e-42 54105000.0 16603.0 18264.9 15818.300000000001 14550.599999999999 22431.6 18609.1 16055.0 17695.7 25042.0 22775.0 23198.0 False True 19405.180495622484 19194.505394304426 18061.572797994482 18115.49765320125 19131.941354960833 20578.302610279152 18971.985680713868 20204.119665808408 19370.026983856696 17630.111682075538 17437.296367770818 1.1128548879566496 1.100773020626147 1.0358012169465394 1.0388937178749766 1.0971850768288949 1.1801314937970444 1.0880118844444029 1.1586727230920661 1.1108388924132828 1.0110576381933325 1.0 14.089888748839801 -10.626954468899282 0.9495797442237548 1.0011961089687933 1.101621889044267 0.4534761760423146 0.040837560868994226 0.41838310560602526 0.6844467107193295 0.027645421738287677 0.007849082639494222 2.360725716882676e-11 10.626954468899282 0.10042578007547376 AYTNFDAERDALNIETAIK ddPTM_A549_MK2206_60min_R1 2 AYTNFDAERDALNIETAIK 19 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 126.22 5.2208e-15 5022600.0 1705.91 2139.18 1981.81 1664.37 2581.21 1387.3899999999999 1580.46 1044.97 2897.3 3081.6000000000004 3175.3 False True 1993.8259025048105 2248.055124823468 2262.860458253632 2072.1407247164093 2201.5174283082115 1534.2026889250521 1867.6091241943961 1193.0976975864094 2241.0661760373796 2385.4644197358507 2386.785376178234 0.8353603647837672 0.9418756907347473 0.9480787341997909 0.8681722057616929 0.9223776256888766 0.6427903841868039 0.7824788700460564 0.4998764067747139 0.938947505881663 0.9994465541579199 1.0 11.220853127309496 -8.976662978100245 24.97560726739165 0.9730652707871544 0.8083633963397956 0.2728033749937493 0.12767899678456565 169.23116643370722 181115.5953062044 0.02345367387358876 0.02418950059949876 1.05520544096319e-09 8.976662978100245 -0.16470187444735884 AYTNFDAERDALNIETAIK ddPTM_A549_PD325901_60min_R1 2 AYTNFDAERDALNIETAIK 19 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 189.48 1.0045999999999999e-43 21750000.0 4115.1 4193.4 3643.6 4236.5 4817.1 5885.3 4653.799999999999 6297.2 5072.0 5013.4 5658.2 False True 4532.861922623494 4546.792534738582 3890.876606746712 4498.178983210409 4478.763514092841 5837.372068064993 4830.902905657072 6171.597405942166 4858.841478355116 4696.853068407805 4962.277270285022 0.9134640560629409 0.9162713583067124 0.7840909314048122 0.9064747369410988 0.9025621242312386 1.1763494359777498 0.973525388148977 1.2437026529933672 0.9791555799291392 0.9465116140392592 1.0 12.276786633614599 -7.029101401268982 24.477018798026535 1.022033457466581 0.8793938619471479 0.42985918060230444 0.09325818070585383 449.0372475457152 377682.20395010227 0.01339310072171338 0.023227205699778968 9.351872964015694e-08 7.029101401268982 -0.14263959551943317 AYTTGS(ph)PGSR ddPTM_A549_MK2206_60min_R1 1 AYTTGSPGSR 10 0 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 H3BMG9 FAM65A Protein FAM65A 1 AYT(0.001)T(0.013)GS(0.983)PGS(0.002)R 79.311 0.0012691 4541100.0 1572.1 1606.1 1371.6 1733.0 1940.1 1551.4 1642.3 1277.8 2347.6 2864.2 2584.3 True False 1837.432045845216 1687.8436297922435 1566.113504594629 2157.585077797327 1654.7138600349288 1715.568118264026 1940.684651724471 1458.9320630983789 1815.8723483468564 2217.175230726707 1942.5469869484489 0.9458880831148604 0.8688817522214383 0.8062165369059309 1.1106990421820797 0.8518269422323329 0.8831539879295355 0.9990412920580606 0.7510408102870234 0.9347894082085572 1.1413753415610668 1.0 10.923733780086666 -9.766679636800053 1.2462518218916692 0.9873932585021556 0.9051070557988045 0.20788669807811 0.10264195883658914 0.5866157911745895 1.8479640381160596 0.024253926148310654 0.01633692554772518 1.7112771963861633e-10 9.766679636800053 -0.08228620270335119 AYTTGS(ph)PGSR ddPTM_A549_PD325901_60min_R1 2 AYTTGSPGSR 10 0 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 H3BMG9 FAM65A Protein FAM65A 1 AYT(0.001)T(0.038)GS(0.808)PGS(0.153)R;AYT(0.002)T(0.039)GS(0.955)PGS(0.004)R 74.611 0.0016028 11456900.0 7801.5 6879.1 7256.2 8288.6 9428.0 8376.6 7910.0 8312.1 8707.4 9253.099999999999 9239.7 True False 8593.502536839249 7458.825899203545 7748.649367075281 8800.567997223603 8765.809804834298 8308.383746852875 8211.01937851808 8146.308644783694 8341.458258799159 8668.857686856078 8103.275475284096 1.0604973955347317 0.9204704840596628 0.9562366959767733 1.0860506993827779 1.0817612990661625 1.025311773269264 1.0132963396792587 1.0053105894808654 1.029393395823892 1.0697967400092805 1.0 12.984289471271195 -6.205313167662037 24.99845236661481 1.0230349934713954 0.9732083996666445 0.2110806784297551 0.04398382627445033 346.63291451290223 154388.61685029906 0.005773077764762149 0.015274115564143353 6.23285225417893e-07 6.205313167662037 -0.04982659380475085 CAAPRPPS(ph)SSPEQR ddPTM_A549_MK2206_60min_R1 1 CAAPRPPSSSPEQR 14 1 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPS(0.372)S(0.372)S(0.255)PEQR 71.241 0.0016434000000000002 5522400.0 562.92 780.73 1131.0 692.78 779.03 688.17 724.75 707.79 751.52 1132.5 1098.6 True False 657.9271339273507 820.4658222325492 1291.3928067195425 862.5111311000761 664.435718974801 760.9916926297245 856.4276936840473 808.1214000159662 581.301919930836 876.6674634445912 825.7873001824738 0.7967271157863155 0.9935558733480779 1.5638322440102723 1.0444712953438342 0.8046087882775395 0.9215347492769247 1.037104462002265 0.9786072028927981 0.7039366187908024 1.0616141266048467 1.0 9.689626421191877 -6.557013698153915 8.2334746874262 0.8827399840160317 1.1382075054296583 0.12242850196828015 0.19933624786866372 0.2520391440945957 53.529320878580364 0.029184953035865466 0.06116852968883093 2.773232632284304e-07 6.557013698153915 0.2554675214136266 CAAPRPPS(ph)SSPEQR ddPTM_A549_PD325901_60min_R1 2 CAAPRPPSSSPEQR 14 1 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPS(0.402)S(0.402)S(0.196)PEQR;CAAPRPPS(0.333)S(0.333)S(0.333)PEQR 94.544 1.4887999999999999e-05 140858900.0 4564.12 4759.21 5585.610000000001 5111.5 5991.4400000000005 4887.7 5019.9 5415.46 4790.32 6143.299999999999 5629.6 True False 5027.466102472443 5160.2853291489455 5964.683083601525 5427.225745941228 5570.621923745905 4847.896191711767 5210.935041494684 5307.444401953814 4588.9995091865285 5755.410989577858 4937.19488897468 1.0182839072646999 1.0451856661912318 1.2081117350504724 1.0992528891376847 1.12829694776395 0.9819130702208398 1.0554444697192928 1.074991877230924 0.9294750586885456 1.1657248941965708 1.0 12.269475879266702 -8.059965923279075 0.9766910861509558 0.9690863240637095 1.096778086995197 0.0 0.08454691182487754 0.36157532729497627 0.6858999150252034 0.012417835433558705 0.018218040467168288 8.710319324030974e-09 8.059965923279075 0.12769176293148754 CAAPRPPSS(ph)SPEQR ddPTM_A549_MK2206_60min_R1 2 CAAPRPPSSSPEQR 14 1 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPS(0.086)S(0.589)S(0.325)PEQR;CAAPRPPS(0.021)S(0.49)S(0.49)PEQR 111.34 2.5960000000000002e-06 158701000.0 7138.799999999999 8913.9 7312.4 6063.3 9727.8 7427.6 7142.799999999999 7113.5 10156.0 10587.5 11467.1 True False 8343.654913097014 9367.579435654743 8349.408275734737 7548.808772191882 8296.853506338732 8213.583701958156 8440.554302099217 8121.860409180093 7855.682215799406 8195.776396661904 8619.502594140218 0.9679972622514513 1.0867888643624388 0.9686647442290812 0.8757824120064394 0.9625675514013033 0.9529069238336307 0.9792391393718409 0.9422655565648954 0.9113846338580976 0.9508409919423454 1.0 13.073388902738381 -5.976227277324034 23.199579950828582 0.9521488710615229 1.0274766918467764 0.36407787740810915 0.04020563351998786 89.47058626740629 87310.75675299301 0.006043039844160104 0.018786229787520536 1.0562645944806347e-06 5.976227277324034 0.07532782078525346 CAAPRPPSS(ph)SPEQR ddPTM_A549_PD325901_60min_R1 2 CAAPRPPSSSPEQR 14 1 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPS(0.078)S(0.461)S(0.461)PEQR;CAAPRPPS(0.01)S(0.656)S(0.334)PEQR 114.72 3.4988e-06 100727000.0 7259.2 8301.2 7763.5 6472.3 8849.2 6337.6 7765.099999999999 7936.1 6690.9 9279.8 7353.6 True False 7996.148640059406 9000.77125706394 8290.377795717995 6872.079271340199 8227.662720082692 6285.988686824582 8060.605129725757 7777.808259749988 6409.7047412315105 8693.871844299425 6449.153818311111 1.2398756279243808 1.3956515088084906 1.285498536595466 1.065578440977524 1.2757739932829408 0.9746997612270849 1.249870193332844 1.2060199646140277 0.9938830615316396 1.3480639614479153 1.0 12.654894164235026 -6.7083977457891395 0.28039399549325544 0.9687837586532395 1.4349440338277029 0.0 0.1511470647982941 2.1454270680586975 0.23738558736935095 0.06008722753046047 0.3255615646605755 1.9570514995542405e-07 6.7083977457891395 0.46616027517446335 CAAPRPPSSS(ph)PEQR ddPTM_A549_MK2206_60min_R1 1 CAAPRPPSSSPEQR 14 1 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPS(0.22)S(0.22)S(0.56)PEQR 55.196000000000005 0.013678000000000001 7851100.0 914.28 1106.5 757.77 769.98 948.55 692.15 571.42 338.21 806.55 1331.9 1294.5 True False 1068.588112000104 1162.8161237563763 865.233180502094 958.6251345657151 809.0195515365868 765.3928535880149 675.2396174197144 386.15230322468545 623.8677127956884 1031.0228649552766 973.0399236175246 1.0981955478531187 1.1950343408657995 0.8892062488919967 0.9851858195106541 0.8314351054876042 0.7865996399638685 0.6939485225943645 0.39685144859120025 0.6411532534824478 1.0595894782222148 1.0 9.926355189460857 -6.193887332108733 1.0746179148477428 0.7783370423554185 1.1582770525188473 0.37723652347597825 0.17482818115779536 0.5899027172896006 1.1254143378649495 0.030141299572627366 0.17341091507422493 6.399008217618795e-07 6.193887332108733 0.3799400101634288 CAARDPEDRIPS(ph)PLGYAAIPIK ddPTM_A549_PD325901_60min_R1 1 CAARDPEDRIPSPLGYAAIPIK 22 2 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A 1 CAARDPEDRIPS(0.996)PLGY(0.004)AAIPIK 40.104 0.019755 1961600.0 632.57 479.16 427.55 494.85 640.49 587.05 724.04 428.73 552.54 579.7 411.4 True False 696.7880407265784 519.5404948121663 456.5661140670097 525.4157606141085 595.5041919705475 582.2692594358068 751.5937384098901 420.17864381782135 529.3186653096084 543.0976430677795 360.80040807947006 1.9312285272501786 1.4399664833464716 1.2654257141706067 1.4562504610537474 1.6505086431038112 1.6138264990752336 2.0831288479151158 1.1645736379690363 1.4670678121656127 1.5052578403629646 1.0 8.495057160113847 -10.205556791464875 0.5462986947639278 0.9679148289970435 1.5822124895470677 0.0801961096117626 0.2870253138366753 0.7511038169048238 0.4001971723592769 0.21933560343950337 0.06083245477148763 6.229356825599161e-11 10.205556791464875 0.6142976605500242 CALS(ph)SPSLAFTPPIK ddPTM_A549_PD325901_60min_R1 2 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALS(0.487)S(0.257)PS(0.257)LAFTPPIK;CALS(0.654)S(0.306)PS(0.039)LAFTPPIK 178.58 7.4275e-28 13760400.0 6259.4 7060.0 7413.9 6729.7 8408.6 7581.4 7999.4 9758.3 7824.2 7833.0 7286.200000000001 True False 6894.849680073264 7654.970977072154 7917.051837402414 7145.378284742385 7818.008944095213 7519.659592005162 8303.82154443964 9563.663051261748 7495.376083388427 7338.42304321186 6390.04359102731 1.0789988490461608 1.1979528571324636 1.238966796489351 1.1182049360000754 1.2234672319094984 1.1767775109647174 1.299493724283758 1.4966506746042751 1.1729773007985718 1.1484151772479665 1.0 12.6416100575158 -9.973010358827526 1.1125731912510213 1.025233393975737 1.2241166462910817 0.18182747299829616 0.1107903965265718 0.34784593699607513 0.8690400940209747 0.03623029703661152 0.020670874970866438 1.0641176365006575e-10 9.973010358827526 0.19888325231534476 CALSSPSLAFT(ph)PPIK ddPTM_A549_MK2206_60min_R1 2 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALSSPS(0.001)LAFT(0.999)PPIK;CALSSPSLAFT(1)PPIK 134.21 1.7837e-09 4592500.0 2908.8 4051.7 3878.5 3328.0 4611.200000000001 4219.4 3413.1 3611.8 4996.2 4432.1 5498.1 True False 3399.734326667871 4257.91422379007 4428.529620567415 4143.360149399598 3932.8985884197023 4665.89410738896 4033.2160901180023 4123.7837106736 3864.5686772919457 3430.8855317728667 4132.770030159527 0.8226284796535459 1.030280947818844 1.071564492640417 1.0025624748444235 0.9516374150312668 1.1289992119907175 0.9759110864347607 0.9978255941123392 0.9351037316593132 0.8301660887819671 1.0 12.01289337119594 -8.551217524519904 23.716150552250994 0.9692024272306277 1.0039119263778922 0.06582126957724321 0.08460792979864205 319.58080014406244 267448.85339635407 0.012096449471003603 0.013716195434762032 2.8104927898891484e-09 8.551217524519904 0.03470949914726451 CALSSPSLAFT(ph)PPIK ddPTM_A549_PD325901_60min_R1 2 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALSSPSLAFT(1)PPIK;CALSSPS(0.003)LAFT(0.997)PPIK 157.86 1.6994e-19 8681700.0 6613.1 7791.9 7417.0 6900.200000000001 8231.1 6782.0 7614.5 8404.9 7729.2 7242.200000000001 7106.5 True False 7284.457043693084 8448.550758675425 7920.362222044235 7326.40968250879 7652.975931753454 6726.769640564929 7904.27396431428 8237.257675983501 7404.368603017027 6784.926256038414 6232.445551815151 1.1687959378275745 1.3555755422869038 1.270827343166679 1.1755272663994683 1.227925036509077 1.0793146261190858 1.268245971601344 1.3216734277902298 1.1880358266203486 1.0886458934346177 1.0 12.605582658693441 -10.241687500846913 0.6324242316519691 0.9926581723805227 1.2349111126017351 0.441573892723903 0.0773526950695876 0.45391376861835714 0.33148907907969233 0.055687866523099636 0.016667225375002086 5.7320833806574094e-11 10.241687500846913 0.24225294022121246 CAPPS(ph)PPPPVEPATQEEAER ddPTM_A549_MK2206_60min_R1 1 CAPPSPPPPVEPATQEEAER 20 0 Q6IQ19;Q6IQ19-3;Q6IQ19-4 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 CAPPS(1)PPPPVEPATQEEAER 80.638 0.00019752 2333300.0 287.98 507.3 418.56 441.87 549.5 337.04 468.42 481.92 934.25 670.1 558.19 True False 336.58398356498014 533.1194031465067 477.9181018395508 550.1281698362977 468.66927791824855 372.70534909095494 553.5258506733096 550.233635818102 722.6438666906848 518.7239445953383 419.5760177397189 0.8022002434223438 1.2706145742515331 1.1390500925532498 1.3111525601483875 1.1170068309504388 0.8882904011023818 1.3192504510986744 1.3114039233754196 1.7223192845568498 1.2363050380947298 1.0 8.71278840802172 -7.963196278383783 23.92752710318327 1.3468241684106335 1.109595947114309 0.2210192525954643 0.21012884709833907 169.03267938314193 109893.98043764957 0.04450027126460628 0.0614858350864527 1.0884380650973284e-08 7.963196278383783 -0.23722822129632437 CAPPS(ph)PPPPVEPATQEEAERR ddPTM_A549_MK2206_60min_R1 2 CAPPSPPPPVEPATQEEAERR 21 1 Q6IQ19;Q6IQ19-3;Q6IQ19-4 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 CAPPS(1)PPPPVEPATQEEAERR;CAPPS(1)PPPPVEPATQEEAERR 123.29 2.0366e-15 10771200.0 1986.2400000000002 2682.8 2325.7 1946.26 2725.0 2073.95 2237.26 2047.85 3498.6 2491.8999999999996 3393.8 True False 2321.468753094333 2819.3430608347126 2655.5192312888066 2423.093787370932 2324.156109785671 2293.4140124234095 2643.741182437492 2338.1390087775985 2706.1726861161656 1928.9780593002884 2551.0257958850184 0.9100138292756674 1.1051801457211874 1.04096134016847 0.9498507585770205 0.9110672708738172 0.8990163941591047 1.0363443547697675 0.9165485557022508 1.060817452524945 0.7561578022503198 1.0 11.316861772158815 -8.780064609871168 24.997538498618862 1.0287193489194304 0.9749789260593273 0.0 0.10415794579692648 386.6392803805766 518919.5269087606 0.01154204303504545 0.012298039168853128 1.6593400295121521e-09 8.780064609871168 -0.053740422860103054 CAPSAGS(ph)PAAAVGR ddPTM_A549_MK2206_60min_R1 2 CAPSAGSPAAAVGR 14 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 CAPS(0.001)AGS(0.999)PAAAVGR;CAPS(0.022)AGS(0.978)PAAAVGR 201.48 1.7555e-31 29739000.0 3827.2 6006.3 4885.6 4546.7 6324.6 5468.8 4307.0 4727.6 6913.5 6608.8 6950.7 True False 4473.137793943648 6311.99501501846 5578.451544216621 5660.641704109116 5394.259718146962 6047.5047861043595 5089.526149288982 5397.751777667789 5347.603288590898 5115.867489989061 5224.649360439032 0.8561603823242535 1.2081183979182974 1.067717881023093 1.0834491108573547 1.0324634910415649 1.1574948611663736 0.9741373627533361 1.0331318726457484 1.0235334315605698 0.9791791060135699 1.0 12.35111850215602 -7.79655837251452 24.999926694232496 1.0108759457448364 1.073089345702076 0.12600532764416184 0.08384521731516402 271.42629704241983 193217.50747840665 0.011547791499400679 0.01595595603062689 1.5975027979805065e-08 7.79655837251452 0.06221339995723962 CAPSAGS(ph)PAAAVGR ddPTM_A549_PD325901_60min_R1 2 CAPSAGSPAAAVGR 14 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 CAPSAGS(1)PAAAVGR;CAPS(0.002)AGS(0.998)PAAAVGR 163.33 2.1480000000000003e-19 36458000.0 12994.9 14031.5 13575.5 12461.3 14329.9 13047.900000000001 13008.1 14577.4 10672.7 15124.8 15472.4 True False 14314.13268166024 15213.98374855353 14496.815066113179 13231.006199334337 13323.417259471247 12941.642228417457 13503.130363805443 14286.642321250922 10224.163534314011 14169.817546785487 13569.392887624668 1.0548837962172042 1.1211985587379325 1.0683466228864464 0.9750625034522405 0.9818727609856627 0.9537377490352039 0.9951167657707327 1.052857886831502 0.7534724374911779 1.0442484541595378 1.0 13.728068553688175 -6.884193580336043 0.6255440822754598 0.8966393310830684 1.101166639424565 0.06757890335173355 0.08783459932208773 0.8572758008970836 0.5747646431853464 0.020478609109838935 0.0869505665032584 1.3055888115305712e-07 6.884193580336043 0.20452730834149657 CDDS(ph)PAPR ddPTM_A549_MK2206_60min_R1 2 CDDSPAPR 8 0 Q9H1J1-3;Q9H1J1-2;Q9H1J1 Q9H1J1-3 UPF3A Regulator of nonsense transcripts 3A 1 CDDS(1)PAPR;CDDS(1)PAPR 68.735 0.0073985 3196800.0 485.54999999999995 674.7 560.8 542.19 533.61 625.03 562.3 534.06 558.1700000000001 804.5999999999999 880.5500000000001 True False 567.4989694422391 709.0393481232965 640.3298726864009 675.0265743398338 455.1166758688928 691.1702597386642 664.462631470907 609.7646404901556 431.74538621433163 622.8403011810307 661.8851330563235 0.8573979699797055 1.0712422937334056 0.9674335329600334 1.019854564828837 0.6876067358808078 1.0442450286609604 1.0038941778351806 0.921254474586102 0.6522965461102025 0.941009655716243 1.0 9.370437055826937 -8.540877972232469 24.975829736628796 0.8332261117314501 0.9525198053093367 0.06455771682659273 0.12838071538491466 400.1341446842258 555226.1228690249 0.025869423623376114 0.029335734964784962 2.8782070177761924e-09 8.540877972232469 0.11929369357788655 CDGDAS(ph)PPS(ph)PAR ddPTM_A549_MK2206_60min_R1 4 CDGDASPPSPAR 12 0 F8W8D3;Q14493;E7EUV9 F8W8D3 SLBP Histone RNA hairpin-binding protein 2 CDGDAS(1)PPS(1)PAR;CDGDAS(1)PPS(1)PAR;CDGDAS(1)PPS(1)PAR;CDGDAS(1)PPS(1)PAR 71.976 0.0025239999999999998 12714900.0 5122.43 4817.1 3934.66 3187.77 2383.23 1891.57 1901.23 1803.7099999999998 2033.54 6919.160000000001 6828.55 True False 5986.970952610464 5062.269814502346 4492.6539530390055 3968.773793104432 2032.6600240456912 2091.7346818774545 2246.658881080263 2059.391416130207 1572.946436896094 5356.116950434678 5132.8325766075295 1.16640682571561 0.9862526663295492 0.8752777118649678 0.773213178857966 0.3960113628699629 0.40752053581688336 0.43770351897297993 0.4012192849452595 0.30644803106664154 1.0435011994828642 1.0 12.325539487965818 -6.0523413914269675 1.5651039103184288 0.59224965559827 1.110336959422482 0.4094667751520765 0.23556730742167656 0.40993459412363875 1.8208746167958232 0.041983288826906044 0.20317243896341855 8.864589079732252e-07 6.0523413914269675 0.5180873038242119 CDGDAS(ph)PPS(ph)PAR ddPTM_A549_PD325901_60min_R1 4 CDGDASPPSPAR 12 0 F8W8D3;Q14493;E7EUV9 F8W8D3 SLBP Histone RNA hairpin-binding protein 2 CDGDAS(1)PPS(1)PAR;CDGDAS(1)PPS(1)PAR;CDGDAS(1)PPS(1)PAR;CDGDAS(1)PPS(1)PAR 75.012 0.0014711 16631900.0 3697.8999999999996 3752.2200000000003 4536.05 3781.74 4921.55 4111.44 3574.53 4001.9400000000005 4008.56 4596.32 4492.49 True False 4073.3080857499012 4068.4327478172363 4843.893630484528 4015.3294908453086 4575.877306425777 4077.9577957835872 3710.5606952078692 3922.1181672388034 3840.0941633428993 4306.107570787123 3939.9422102404915 1.0338497034709728 1.0326122899068872 1.229432659670625 1.0191341082132814 1.1614072141800447 1.0350298502308923 0.9417804874303928 0.9954760648632458 0.9746574844072402 1.092936733842165 1.0 11.94395875352879 -7.51563748679302 11.621081332177607 0.9853815689536467 1.095357176034892 0.2985271343020902 0.06726386181024936 0.23263454819925838 361.8489519587852 0.008225485026978611 0.012598192202174969 3.050440183044481e-08 7.51563748679302 0.10997560708124521 CDGDAS(ph)PPSPAR ddPTM_A549_MK2206_60min_R1 1 CDGDASPPSPAR 12 0 F8W8D3;Q14493;E7EUV9 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 CDGDAS(0.969)PPS(0.031)PAR 75.479 0.0012379000000000001 6356900.0 1001.4 1059.0 762.82 800.75 953.66 785.81 646.48 784.29 886.02 1041.5 1465.0 True False 1170.4118381206024 1112.8985766452809 870.9993464383754 996.9337859470332 813.3778773057626 868.9638926215378 763.9370478273371 895.4655092873908 685.3378846832012 806.2244266468355 1101.2000680569124 1.0628512221088176 1.0106234179671008 0.7909546790850364 0.9053157685561545 0.7386286115482926 0.7891062830706507 0.693731384502471 0.8131724064160802 0.6223554688772335 0.732132561587499 1.0 10.104860888870355 -5.703296394217864 4.335556448705982 0.8053229526904069 1.0501615766531673 0.4872125021857181 0.0976221220413977 0.19061811658169192 7.110969404160727 0.01885619436662865 0.07822053965806115 1.9801751486563423e-06 5.703296394217864 0.24483862396276046 CDGDAS(ph)PPSPAR ddPTM_A549_PD325901_60min_R1 2 CDGDASPPSPAR 12 0 F8W8D3;Q14493;E7EUV9 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 CDGDAS(0.997)PPS(0.003)PAR;CDGDAS(0.993)PPS(0.007)PAR 82.54299999999999 0.00064079 12968200.0 2566.4 2323.1000000000004 2699.0 2633.9 2637.5 2696.3 2791.7 2675.5 2357.5 3243.1 3322.6 True False 2826.939038716175 2518.8757899201582 2882.170370405471 2796.5900209790866 2452.25109888104 2674.342226755417 2897.939671176857 2622.135053610855 2258.422473427088 3038.3301125290923 2913.941263696758 0.9701427664090223 0.8644222933734079 0.9890969342151458 0.9597276567720536 0.8415581773841257 0.9177749256903776 0.994508608420061 0.8998585820100901 0.77504049294458 1.0426874935270758 1.0 11.508756081959008 -6.709313010934179 24.99866638878712 0.8985376367660244 0.943120614851226 0.0 0.0788943552250383 273.711382333933 131264.37321410922 0.012752169143776597 0.02654574099130912 1.952931403750962e-07 6.709313010934179 0.04458297808520162 CDILVQEELLAS(ph)PK ddPTM_A549_MK2206_60min_R1 4 CDILVQEELLASPK 14 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK 170.45 1.5222e-22 32643500.0 2801.86 3303.79 2924.72 2743.1600000000003 4646.12 4898.6 4069.0499999999997 4473.039999999999 5102.659999999999 3742.2300000000005 3798.4100000000003 True False 3274.7454690998525 3471.9387993719643 3339.489274685042 3415.234323145134 3962.6819026779494 5416.96660057249 4808.343714363675 5107.1071181104835 3946.915657273631 2896.857643908391 2855.159966217102 1.1469569158461805 1.2160225137830205 1.1696329852612932 1.1961621637859028 1.3879018862569164 1.8972550276227123 1.6840890777599449 1.7887288903385201 1.3823798680194557 1.0146043227646315 1.0 11.479355862475414 -6.709742024924189 8.106584479297249 1.3370125166558118 1.1829548175098685 0.09731770361409542 0.2801404000247316 0.7914547071090748 109.59353766325728 0.049079744478814774 0.10210677414358497 1.9510031701653554e-07 6.709742024924189 -0.15405769914594325 CDILVQEELLAS(ph)PK ddPTM_A549_PD325901_60min_R1 4 CDILVQEELLASPK 14 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK 177.74 4.5946999999999995e-23 40939400.0 4003.08 4782.389999999999 4700.9800000000005 4096.87 4743.46 4022.2700000000004 4156.79 5071.68 3887.6600000000003 4021.08 4468.62 True False 4409.4697346882585 5185.418789099166 5020.01677208919 4349.924355233151 4410.295733648631 3989.51396669937 4314.97891813277 4970.521363744011 3724.2751699018254 3767.1883225581923 3919.008068916093 1.1251494401510165 1.3231457292031892 1.2809406573836453 1.109955447587593 1.1253602075048588 1.0179907508592543 1.1010385388990007 1.2683110818699441 0.9503106664773654 0.9612606701266908 1.0 11.936272827995996 -7.356758826907008 0.4062780373997046 0.9719204766275369 1.2713579435879732 0.41764400023716974 0.09436216004343795 0.9186872955258666 0.2815960351259819 0.03344165265172699 0.10667618017787948 4.3978577016316065e-08 7.356758826907008 0.29943746696043627 CDILVQEELLAS(ph)PKK ddPTM_A549_MK2206_60min_R1 2 CDILVQEELLASPKK 15 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PKK;CDILVQEELLAS(1)PKK 92.993 1.0742e-05 25448000.0 2138.8599999999997 2916.7 2556.1 2375.9 3316.0 3883.6 3055.6000000000004 3662.3 4499.9 3070.9 3083.8 True False 2499.84727789358 3065.147571767035 2918.593415787642 2957.9956066582045 2828.220792678638 4294.55997427496 3610.7629676729534 4181.442240323366 3480.679834863699 2377.1815571673233 2318.0073514497662 1.0784466564914406 1.3223200391707042 1.2590958410732593 1.2760941438810218 1.2201086380980481 1.8526947171194197 1.557701258114928 1.803895159222916 1.5015827420421057 1.0255280492016332 1.0 11.178669426452245 CDILVQEELLAS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 CDILVQEELLASPKK 15 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PKK;CDILVQEELLAS(1)PKK 142.31 7.4159e-14 26685000.0 9833.2 11657.0 13883.7 10264.099999999999 12382.3 10679.7 12615.599999999999 12716.6 9182.9 9643.4 10718.7 True False 10831.459225180753 12639.376300245061 14825.93137147034 10898.090145537579 11512.609964616013 10592.728064043251 13095.693561521197 12462.957437020283 8796.974647394949 9034.51407824706 9400.367851437562 1.152237805622079 1.3445618831088797 1.577165022239323 1.1593259240244493 1.2246978146557779 1.126841867408768 1.3931043729866934 1.3257946533565035 0.935811745499902 0.9610809088567153 1.0 13.198501497522692 -8.761513715921916 24.999999995986304 0.9696888644184332 1.2912295153102784 0.576419660624635 0.12302412126503294 1.0039742145098447 337577.90662351815 0.021270676037220392 0.023360409375477842 1.7317543374870332e-09 8.761513715921916 0.32154065089184525 CDS(ph)ADLR ddPTM_A549_MK2206_60min_R1 1 CDSADLR 7 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 CDS(1)ADLR 83.948 0.014279 10603000.0 944.36 1082.3 959.13 785.84 1504.9 1377.3 1191.6 1069.9 1435.8 1554.5 1427.8 True False 1103.7448806147108 1137.3844471229345 1095.1490563297216 978.3708352776983 1283.5312035289755 1523.0449718222521 1408.0982956797661 1221.5616014313318 1110.5935925014553 1203.3373703528614 1073.2378547246824 1.028425223500763 1.0597692227457889 1.0204159790940845 0.911606715110398 1.195942910398217 1.419112236041058 1.3120095321656218 1.1382021199249432 1.0348065786277691 1.1212215121330709 1.0 10.067754131309819 -4.259353343055532 16.378717873028865 1.0726474845246219 1.0708457003800465 0.0 0.14668579005745772 0.0 0.0 0.021344763330084667 0.0 5.5035974016667476e-05 4.259353343055532 -0.0018017841445754357 CDS(ph)ADLR ddPTM_A549_PD325901_60min_R1 2 CDSADLR 7 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 CDS(1)ADLR;CDS(1)ADLR 83.948 0.014279 22751900.0 2162.1499999999996 2422.1000000000004 2763.8 1925.01 2420.2 1982.18 2113.45 2110.29 1828.79 2080.6 2033.5300000000002 True False 2381.6498763092973 2626.2188673606906 2951.3680880795273 2043.9134956850878 2250.2135012367385 1966.0377832696836 2193.8784962742166 2068.198610459521 1751.9323160885356 1949.2305609225823 1783.4187016087621 1.3354406759113218 1.4725756015632598 1.6548935398160831 1.1460648550120855 1.2617415636647167 1.1023983215473667 1.2301533533853786 1.1596820245261916 0.982344928035226 1.0929741620205322 1.0 10.800429735701364 -7.095986639854139 0.5101392608382158 0.9863902409754599 1.5153218302800266 0.6075034690783654 0.12124953558854655 0.462784512109918 0.20909086540455885 0.027779357514757446 0.10705018589508772 8.017027256872283e-08 7.095986639854139 0.5289315893045667 CDS(ph)ADLRHDIDR ddPTM_A549_MK2206_60min_R1 2 CDSADLRHDIDR 12 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 CDS(1)ADLRHDIDR;CDS(1)ADLRHDIDR 53.777 0.0061334 4665100.0 807.54 887.19 806.03 775.8199999999999 1163.73 672.25 743.04 565.26 978.1800000000001 1498.6 1379.5 True False 943.8330095425508 932.3441815051247 920.3371741822755 965.8959348278827 992.5468585838098 743.3870487965653 878.0407499344517 645.3873360361482 756.62379183248 1160.065219177098 1036.9320777368678 0.9102168115027282 0.8991371773742317 0.8875578197859749 0.9314939286437899 0.957195634983219 0.716910070348125 0.8467678537352218 0.62240078197284 0.7296753645463759 1.1187475477747508 1.0 10.018105680914019 CDS(ph)ADLRHDIDR ddPTM_A549_PD325901_60min_R1 2 CDSADLRHDIDR 12 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 CDS(1)ADLRHDIDR;CDS(1)ADLRHDIDR 58.07899999999999 0.0035915 7025900.0 874.8599999999999 1026.4099999999999 1052.49 1214.98 973.6700000000001 1144.69 1107.56 1157.97 1125.22 1130.7 1005.0 True False 963.675143162108 1112.9091728862081 1123.9183005365153 1290.0265551802156 905.2827781791483 1135.3680241607603 1149.7088018800869 1134.873379940108 1077.9309164579545 1059.307409033531 881.3913712199014 1.0933566797100824 1.2626730975887266 1.2751637209483242 1.4636251242109817 1.0271064679543886 1.2881542311780738 1.304424843970071 1.2875930228014048 1.222987825449244 1.201858157026637 1.0 9.783638962542566 -10.344412482578122 0.6893216394468181 0.9949560908919278 1.2546844554346699 0.09999457488608432 0.12220914846793379 0.5374039878546921 0.45926236175360746 0.07480478203415451 0.021649970888852337 4.5246763275422455e-11 10.344412482578122 0.25972836454274206 CDS(ph)TSSTPK ddPTM_A549_MK2206_60min_R1 1 CDSTSSTPK 9 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 CDS(0.974)T(0.017)S(0.003)S(0.005)T(0.001)PK 74.944 0.0021121 3100600.0 1195.8 1130.0 1050.2 766.37 1889.6 2461.7 2148.8 2378.4 2279.1 3164.1 3186.2 True False 1397.6218054969202 1187.512173379761 1199.1341517390495 954.1306844036568 1611.6423431379844 2722.19546005579 2539.209145482276 2715.545483544519 1762.887488974834 2449.327612437111 2394.978605353538 0.583563378133229 0.4958341467958394 0.500686790712286 0.39838797819357197 0.672925569996931 1.136626212013259 1.0602220578531838 1.1338495790627992 0.7360765081718142 1.0226928987850186 1.0 11.225797052904037 -7.025428442724882 5.839059894538321 0.9255812822576619 0.49837789102339697 0.7797082568346665 0.12595947743603308 0.08673730276463076 9.64520657976231 0.022334730040931814 0.040158900497291726 9.43129995089614e-08 7.025428442724882 -0.42720339123426493 down CDS(ph)VEHLR ddPTM_A549_MK2206_60min_R1 4 CDSVEHLR 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 CDS(1)VEHLR;CDS(1)VEHLR;CDS(1)VEHLR;CDS(1)VEHLR 117.7 0.00076461 58078000.0 3188.78 3245.87 3057.75 2544.57 4515.08 4210.36 3688.34 3970.88 4811.7 4062.69 4689.2699999999995 True False 3726.9681058140723 3411.070918768288 3491.3849290421585 3167.9897642300875 3850.917713090309 4655.897500589223 4358.463635353734 4533.76440030998 3721.8576327059855 3144.925507339253 3524.794841731904 1.0573574557272192 0.9677360164009609 0.9905214589245911 0.898772809901611 1.092522511522448 1.3208988635212462 1.2365155508489702 1.28624915885383 1.0559075917386598 0.8922293774675399 1.0 11.783323573541038 -6.791951921966541 24.351779379019863 1.0895876975519194 0.9786729071084767 0.208782945093977 0.12603134628044643 241.0958943757896 192415.7599492861 0.019735961382226233 0.03730112216567348 1.6145372822863958e-07 6.791951921966541 -0.11091479044344277 CDS(ph)VEHLR ddPTM_A549_PD325901_60min_R1 4 CDSVEHLR 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 CDS(1)VEHLR;CDS(1)VEHLR;CDS(1)VEHLR;CDS(1)VEHLR 114.4 0.00075152 57197000.0 4628.139999999999 4889.9 5710.9 3827.06 4741.05 3525.2400000000002 4360.16 4473.36 3538.24 4316.78 4336.25 True False 5097.985365743408 5301.989034105545 6098.476016431495 4063.4488043161173 4408.05500373458 3496.531614229599 4526.088274771102 4384.135325516966 3389.540077361042 4044.2177740937163 3802.91873975353 1.3405454374956778 1.3941894100133128 1.6036303780781656 1.0685079230957937 1.1591241636733656 0.9194336912011462 1.1901617111767266 1.1528343426557426 0.8912996330762305 1.0634510098303664 1.0 11.89289139665002 -6.390767522821683 4.780221324945169 0.995526284235925 1.4390162058184848 0.6697841336107357 0.11732349346749602 0.09197750904174219 3.1794254827791044 0.017886240624423632 0.04259115681309389 4.066609559060921e-07 6.390767522821683 0.44348992158255973 CDVDIRK ddPTM_A549_MK2206_60min_R1 1 CDVDIRK 7 1 P60709;P63261;A0A2R8Y793;Q562R1 P60709 ACTB;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 0 55.717 0.039760000000000004 6817300.0 1733.0 2587.3 2247.2 1398.3 2369.1 2078.8 1736.1 1637.0 2625.4 2845.5 2447.5 False True 2025.4880322178988 2718.9825187481924 2565.886750893154 1740.8835627720714 2020.6085283277937 2298.777236204241 2051.526897557605 1869.049763102243 2030.7510919022995 2202.699573714423 1839.7182024363767 1.1009773287754088 1.4779342375084337 1.3947172710989635 0.9462772942435332 1.0983250182837025 1.2495268205532364 1.1151310536802461 1.0159435073409733 1.1038381254329788 1.197302701466639 1.0 10.845269084051802 -6.119526149746315 0.31410462855972726 1.0243517373676965 1.433832411661345 0.15988674749441312 0.1435302848641886 3.90433703956671 0.40221883948918224 0.05485810963539789 0.5680141260082564 7.594056959432805e-07 6.119526149746315 0.40948067429364854 CDVDIRK ddPTM_A549_PD325901_60min_R1 2 CDVDIRK 7 1 P60709;P63261;A0A2R8Y793;Q562R1 P60709 ACTB;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 0 ; 94.887 0.012088 38853000.0 12164.2 14192.2 16543.3 12117.4 12778.6 13430.7 16445.800000000003 17480.4 10359.0 13706.4 13321.599999999999 False True 13399.100629189259 15388.226501530233 17666.027820944375 12865.864277387898 11881.075219776783 13321.324832134389 17071.65391848707 17131.739708891488 9923.647254392867 12840.975564851145 11683.127652580135 1.1468761642975085 1.3171324459620926 1.5120974747753406 1.101234588885671 1.016943028706267 1.1402190601925393 1.4612229213054022 1.4663658755032147 0.8493998824194393 1.0991042764148269 1.0 13.51213892472913 -8.7741841487245 24.999993179923187 0.9288832572291431 1.267837481953223 0.3630158856267929 0.16538594719437993 147.89706733703363 290112.1958956639 0.029506191552492896 0.03151064456726518 1.681960728042584e-09 8.7741841487245 0.3389542247240799 CEDLDELHYQDT(ph)DSDVPEQR ddPTM_A549_MK2206_60min_R1 2 CEDLDELHYQDTDSDVPEQR 20 0 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 CEDLDELHYQDT(0.916)DS(0.084)DVPEQR;CEDLDELHYQDT(0.585)DS(0.415)DVPEQR 143.19 6.5399000000000005e-21 8553900.0 703.01 601.9300000000001 726.35 878.75 1331.98 976.47 786.86 969.8800000000001 1097.95 934.63 1006.3199999999999 True False 821.6609010556864 632.5656659490969 829.3573520430948 1094.0437894485867 1136.0475064632371 1079.7994072716733 929.8222767191854 1107.363460132929 849.2660780658678 723.4964338712739 756.4229709809097 1.0862453053087189 0.8362591965296905 1.0964201033815852 1.4463386642394784 1.501868068588716 1.427507424677251 1.2292359068807972 1.463947424411145 1.1227396716476783 0.9564707334747681 1.0 9.563049365353567 -8.972223594739312 7.269585706002947 1.0533806359491094 1.2622511963116214 0.22886348815124236 0.1937067349099241 0.23715468352980013 39.977863605848654 0.037721227713138086 0.039155543398637215 1.0660471299108646e-09 8.972223594739312 0.20887056036251206 CEDLDELHYQDT(ph)DSDVPEQR ddPTM_A549_PD325901_60min_R1 2 CEDLDELHYQDTDSDVPEQR 20 0 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 CEDLDELHYQDT(0.91)DS(0.09)DVPEQR;CEDLDELHYQDT(0.737)DS(0.263)DVPEQR 126.31 2.4953e-15 12289300.0 672.71 989.31 792.61 918.55 1010.98 844.19 754.21 868.42 926.67 905.32 711.8599999999999 True False 741.003023977072 1072.682625683747 846.4012809511228 975.286747321592 939.9722524916605 837.3151965303022 782.9118742695484 851.0986818376892 887.7252824817297 848.157940697122 624.305732852337 1.1869233053356194 1.7182008257122021 1.355748051654231 1.5621941238080386 1.5056280969855935 1.341194149707331 1.254052034237407 1.3632722511599844 1.4219399819153953 1.3585618328732074 1.0 9.286108903558336 -12.91953358387972 0.25541016449997556 0.1636299964135568 1.47352917730666 0.06526508916831086 0.17595600517778537 7.959240215524066 0.257851539698092 3.6150468612543425 0.07035944769681964 1.2035563154946317e-13 12.91953358387972 1.3098991808931033 CEERS(ph)PS(ph)FGEDYYGPSR ddPTM_A549_PD325901_60min_R1 2 CEERSPSFGEDYYGPSR 17 1 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 2 CEERS(1)PS(0.996)FGEDY(0.002)YGPS(0.002)R;CEERS(1)PS(1)FGEDYYGPSR 88.755 2.0429e-06 5804900.0 863.5999999999999 972.8 972.32 813.0 837.5899999999999 688.47 750.97 735.25 649.8 919.34 928.1500000000001 True False 951.2720362512815 1054.7812700418972 1038.3074822351427 863.2171635430336 778.7605679286338 682.8633285815012 779.5485742965518 720.5848619575335 622.4911657403694 861.2927155044542 813.9934340276129 1.1686482918472925 1.2958105384497685 1.2755723066433489 1.0604718999659042 0.9567160315720877 0.8389052049261819 0.9576841061719269 0.885246528822847 0.764737330447868 1.0581076941159169 1.0 9.668873347000883 -6.562677382092982 2.0699477553967895 0.8892878131591534 1.2535888793186554 0.736580742227268 0.0834520404402782 0.11884695359898546 1.0155586238189487 0.013367495371169089 0.03446028900861956 2.737301389751944e-07 6.562677382092982 0.364301066159502 CET(ph)SPPSSPR ddPTM_A549_MK2206_60min_R1 1 CETSPPSSPR 10 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72;M0QZB5;B1APN9;O75335-2;O75335-1;O75335 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 1 CET(0.504)S(0.491)PPS(0.004)SPR 79.311 0.0013449999999999998 5305000.0 1093.8 880.19 773.81 826.1 1013.2 1053.9 812.47 695.77 1292.8 1322.7 1196.5 True False 1278.4066991574941 924.9879114045419 883.5478936937658 1028.4945370850382 864.1596221779246 1165.422998477798 960.0852822179759 794.3975282062609 999.9828641773796 1023.9011513449533 899.3760282799293 1.4214373732002474 1.0284773913460823 0.9824009823605871 1.143564543355742 0.9608435126191248 1.2958128322662632 1.0675015255344908 0.8832762973742568 1.1118629280011638 1.1384572405194968 1.0 9.812780621099245 -5.259028497274143 24.674680666944088 1.053633804576069 1.4214375266274928 0.4868399167450018 0.10605806657864678 108.52863686347932 1110673.4059552597 0.013393366331854006 0.12435848377898331 5.507715550229837e-06 5.259028497274143 0.36780372205142386 CET(ph)SPPSSPR ddPTM_A549_PD325901_60min_R1 2 CETSPPSSPR 10 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72;M0QZB5;B1APN9;O75335-2;O75335-1;O75335 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 1 CET(0.557)S(0.43)PPS(0.007)S(0.007)PR;CET(0.756)S(0.242)PPS(0.001)S(0.001)PR 104.22 0.00037239 12444200.0 1919.1 2064.4 2454.8 2230.67 2778.1000000000004 2217.26 2624.8 2559.0 2357.09 2396.7 2559.9 True False 2113.925619233248 2238.374233012431 2621.3974899115788 2368.4534196808618 2582.975839924711 2199.20336969021 2724.6882003456717 2507.9587375033366 2258.0297043012733 2245.371952976619 2245.0485285431105 0.941594621388896 0.9970271041156465 1.1676351119290478 1.054967582913601 1.1505211611621124 0.9795794352460385 1.2136433425400457 1.1171066930703888 1.0057821359285213 1.0001440612215713 1.0 11.132530914987885 -8.783126734303094 22.028426372688603 1.0027303721819372 1.0809866024080301 0.15335742185979861 0.07903317775807878 76.91570154257133 78124.47351251876 0.013296900089171764 0.014166361701635904 1.647681500686196e-09 8.783126734303094 0.07825623022609296 CETS(ph)PPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 CETSPPSSPR 10 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72;M0QZB5;B1APN9;O75335-2;O75335-1;O75335 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 2 CET(0.419)S(0.581)PPS(0.724)S(0.276)PR 104.79 0.00038725 10874000.0 1070.8 1502.3 1261.5 874.41 1517.3 1341.1 931.93 1068.0 1373.5 1476.0 1705.6 True False 1251.5248614535055 1578.7606531578895 1440.399669033336 1088.6404892537569 1294.107179955156 1483.0143118498672 1101.2496179026894 1219.392270612827 1062.4044430287988 1142.5705748734797 1282.052447834723 0.9761885042747075 1.2314321897082146 1.1235107202252514 0.8491388094865991 1.0094026825039744 1.156750111397199 0.8589739208895907 0.9511251062094038 0.8286747120393625 0.8912042380194225 1.0 10.324239567432558 -6.667969389790246 0.6743408742564512 0.921380357086509 1.120685417953367 0.24555102115545457 0.11076361194511325 1.0117251115125383 0.7507632537883862 0.021577446398317025 0.10878762531985654 2.147981864169051e-07 6.667969389790246 0.19930506086685795 CETS(ph)PPSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 CETSPPSSPR 10 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72;M0QZB5;B1APN9;O75335-2;O75335-1;O75335 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 2 CET(0.059)S(0.941)PPS(0.136)S(0.864)PR 121.68 4.8335e-05 12588000.0 1432.0 1684.4 1608.1 1423.9 1925.3 1652.1 1318.1 1387.0 2309.4 2180.3 2321.0 True False 1673.6865909613562 1770.128765345903 1836.152760818477 1772.7555639213006 1642.0909204294885 1826.9241254247752 1557.5817082372428 1583.6114975093542 1786.3245873539918 1687.768715715886 1744.6316436587665 0.9593352253151689 1.01461461608805 1.0524587052472443 1.0161202626151808 0.941225000932441 1.047168972353057 0.8927854277426434 0.907705361911396 1.023897849065599 0.9674069147206169 1.0 10.768706746905227 CETS(ph)PPSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 CETSPPSSPR 10 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72;M0QZB5;B1APN9;O75335-2;O75335-1;O75335 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 2 CET(0.288)S(0.712)PPS(0.569)S(0.431)PR;CET(0.053)S(0.947)PPS(0.077)S(0.923)PR 138.63 3.191e-07 30961000.0 4248.6 4499.700000000001 5083.3 4450.6 4756.3 3826.1000000000004 4311.2 5365.200000000001 3639.9 4813.1 4338.2 True False 4679.914744345988 4878.905510698523 5428.283306366114 4725.503453954034 4422.233896344227 3794.9415101394147 4475.265075179163 5258.186877082023 3486.9276610932134 4509.200044591215 3804.628902115597 1.2300581383229467 1.2823604183802435 1.4267576276224125 1.242040570980885 1.162329890803596 0.997453787944786 1.1762684851315337 1.382049869346827 0.9164961290059792 1.1851878752442413 1.0 11.893540026909488 -7.903597868532246 0.49865752061816143 0.955961985477268 1.3118375389887162 0.10908168799213447 0.14343444084488025 0.5861036801126028 0.3106755237242971 0.04081519906075164 0.07709399481649308 1.2485390538316473e-08 7.903597868532246 0.3558755535114483 CETS(ph)PPSSPR ddPTM_A549_MK2206_60min_R1 1 CETSPPSSPR 10 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72;M0QZB5;B1APN9;O75335-2;O75335-1;O75335 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 1 CET(0.255)S(0.737)PPS(0.006)S(0.002)PR 61.958 0.0072652 4535000.0 1063.9 1151.8 893.82 721.33 1229.0 898.79 898.73 847.79 1457.4 1583.2 1300.7 True False 1243.4603101423097 1210.4217002644334 1020.5771162706114 898.0558823817342 1048.2157280464555 993.8993612314835 1062.01760765045 967.9668287479851 1127.3012269895678 1225.5540204198464 977.7002925062292 1.2718215588898245 1.2380293936106412 1.0438547723602212 0.9185390341652296 1.0721237746175443 1.0165685423737878 1.0862404519979045 0.9900445322223507 1.1530130814422206 1.2535068566649101 1.0 9.93324847419476 -5.732427879585172 5.817439122942147 1.0535526120578669 1.2595535971473553 0.44397305705797985 0.08435105946851901 0.09582808674823479 9.15636989755107 0.009742274108009557 0.03734265578059405 1.8517063693152158e-06 5.732427879585172 0.2060009850894884 CETSAS(ph)ELER ddPTM_A549_MK2206_60min_R1 2 CETSASELER 10 0 H3BTQ3;P41440-3;P41440;P41440-2 H3BTQ3 SLC19A1 Folate transporter 1 1 CETSAS(1)ELER;CETS(0.003)AS(0.997)ELER 159.94 1.0153000000000002e-08 27889000.0 2074.7200000000003 3216.3 3111.7 3622.6 5579.6 5050.8 5448.6 5622.4 7369.299999999999 7563.9 6142.4 True False 2424.8820139660247 3379.995932071969 3552.9858502822294 4510.137162624691 4758.848231251424 5585.272303550305 6438.540092179236 6419.392417877861 5700.16531635393 5855.209736643302 4617.07255838415 0.5251990267215266 0.7320647205195483 0.7695321668337994 0.9768391346665594 1.0307068323216673 1.2096999197918168 1.3945070194938738 1.390359873426913 1.234584305157386 1.2681649817286964 1.0 12.172762689520333 -6.223435664660478 1.1337759801328084 1.1637415902355468 0.5777646886698118 0.7881685461132445 0.12451225065443998 0.2732315004525924 0.5992130541684677 0.023786497442914088 0.12492302426240506 5.978115965010244e-07 6.223435664660478 -0.585976901565735 down CETSAS(ph)ELER ddPTM_A549_PD325901_60min_R1 2 CETSASELER 10 0 H3BTQ3;P41440-3;P41440;P41440-2 H3BTQ3 SLC19A1 Folate transporter 1 1 CETS(0.003)AS(0.997)ELER;CETSAS(1)ELER 121.02 4.6855e-05 41441000.0 2928.4 3489.1000000000004 3749.2 2359.5 3546.7 2525.0 3320.5 3575.3 2841.5 3152.5 3060.2 True False 3225.68901222586 3783.1387019975136 4003.643257771096 2505.2409561867034 3297.5920274507635 2504.437237161081 3446.8634445473203 3503.987836731409 2722.081636582424 2953.450611990986 2683.8148002061102 1.2019044726849764 1.409612429928838 1.4917732987625028 0.9334626800606015 1.2286958202918907 0.9331632111756544 1.2843149401674847 1.3055997144297407 1.014258374450195 1.1004673689720201 1.0 11.390069404768449 -5.312210813180402 0.1927165836735033 0.9531790458093211 1.6798123533278555 0.17197792036599813 0.16616529100062616 12.433349494356184 0.41969615467834176 0.19291971889883802 2.215234411723116 4.872918937500265e-06 5.312210813180402 0.7266333075185344 CFRS(ph)VS(ph)PER ddPTM_A549_PD325901_60min_R1 1 CFRSVSPER 9 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966-3 ZNF638 Zinc finger protein 638 2 CFRS(1)VS(1)PER 49.31 0.018012 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 CFS(ph)VQGNLQK ddPTM_A549_PD325901_60min_R1 1 CFSVQGNLQK 10 0 Q8NAP3 Q8NAP3 ZBTB38 Zinc finger and BTB domain-containing protein 38 1 CFS(1)VQGNLQK 45.915 0.012577 13831000.0 3221.6 3746.6 4238.1 4796.1 5358.9 4618.7 5812.6 4180.7 4512.1 4876.0 4541.0 True False 3548.654460383429 4062.339130693844 4525.72295176563 5092.344204266598 4982.509351201371 4581.0868385251015 6033.8016737767675 4097.312658804299 4322.472128250417 4568.1285278566365 3982.485787770719 0.8910651913135549 1.0200511306702802 1.1364065543342463 1.2786848404843012 1.2511053690389782 1.1503083959753344 1.5150842954179922 1.0288329644229206 1.085370383875246 1.1470545712640807 1.0 11.95945349790061 CGENT(ph)SPVLDAVLK ddPTM_A549_PD325901_60min_R1 1 CGENTSPVLDAVLK 14 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 CGENT(0.5)S(0.5)PVLDAVLK 54.523999999999994 0.018843000000000002 857700.0 1178.0 1165.6 1611.7 1093.8 1370.2 1282.0 1465.1 1531.1 1029.0 1298.2 2119.5 True False 1297.589692802234 1263.8292026735562 1721.0796539394225 1161.3615417999642 1273.9618789333854 1271.5598170457458 1520.8551822334819 1500.5610093752853 985.7547084438911 1216.2314304478025 1858.8149366174937 0.6980736313446417 0.6799112583920593 0.9259015623531035 0.6247859961321953 0.6853624068954536 0.6840701524378847 0.8181853676089987 0.8072675659180321 0.5303135288108239 0.6543047435701116 1.0 10.86016742753137 -11.053990776270679 1.3639244398968051 0.9997559262906383 0.7001770361564971 0.0 0.14193152222815347 0.29015858353332613 0.9640143583683871 0.07921740966889085 0.017688188695327508 8.830986558409943e-12 11.053990776270679 -0.2995788901341412 CGERDELS(ph)PK ddPTM_A549_MK2206_60min_R1 2 CGERDELSPK 10 1 H0Y4C5;B8ZZS2;Q13506-2;Q13506 H0Y4C5 NAB1 NGFI-A-binding protein 1 1 CGERDELS(1)PK;CGERDELS(1)PK 41.398999999999994 0.024849 96428000.0 3626.7 3868.5 4422.299999999999 3164.0 5724.700000000001 4825.9 3976.0 4296.2 6438.9 5400.3 6542.1 True False 4238.79829569801 4065.3901263005364 5049.4486376267305 3939.1801420373567 4882.604213464232 5336.573534826839 4698.387733822384 4905.199506560696 4980.499430810433 4180.368479328765 4917.516017225341 0.8619795605850837 0.8267161941232256 1.026829118591429 0.8010508004933758 0.9929005205801429 1.0852173162494236 0.9554392334187864 0.9974953796547887 1.0128079732459376 0.850097582740055 1.0 12.263714036288198 -6.893667493879391 8.496977931089388 1.0074876287369958 0.8862301896225795 0.2769697887745305 0.07679744920787059 0.1549476204852613 11.353855758017003 0.007892345692958082 0.014949991467770204 1.2774164547407575e-07 6.893667493879391 -0.12125743911441633 CGERDELS(ph)PKR ddPTM_A549_MK2206_60min_R1 3 CGERDELSPKR 11 2 H0Y4C5;B8ZZS2;Q13506-2;Q13506 H0Y4C5 NAB1 NGFI-A-binding protein 1 1 CGERDELS(1)PKR;CGERDELS(1)PKR;CGERDELS(1)PKR 128.22 2.3441e-08 118186000.0 10819.4 11331.2 11034.7 9216.1 11939.2 9324.6 8907.0 7784.1 12111.699999999999 13761.7 14436.4 True False 12645.450211066553 11907.909680531644 12599.58638754036 11474.044913726455 10182.95949576261 10311.322982831472 10525.286605924539 8887.520012806459 9368.419288410561 10652.922412084261 10851.443455629225 1.1653242504347825 1.0973572068289563 1.1610977322103888 1.05737498984748 0.9383967706600511 0.9502259330745936 0.9699434595002666 0.8190173085402778 0.8633339266538462 0.9817055634711914 1.0 13.4055993418291 -6.619893380879433 2.500699127651857 0.9281404975728748 1.1372164949748682 0.7625604933846093 0.051943234829078595 0.12446931155844887 1.5705733810074025 0.009229715482650494 0.02175241496123089 2.3994219038307374e-07 6.619893380879433 0.20907599740199345 CGERDELS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 CGERDELSPKR 11 2 H0Y4C5;B8ZZS2;Q13506-2;Q13506 H0Y4C5 NAB1 NGFI-A-binding protein 1 1 CGERDELS(1)PKR;CGERDELS(1)PKR 102.52 4.7042e-05 119073000.0 10936.1 12073.800000000001 12972.1 11280.4 12710.599999999999 10250.2 13007.2 14418.1 9583.0 13788.400000000001 12624.7 True False 12046.324821268694 13091.301499004785 13852.464713574229 11977.16468835282 11817.85130518952 10166.725769642982 13502.196113812945 14130.519684719355 9180.259835780182 12917.798070856941 11071.941934567054 1.0880046962366716 1.1823853102167388 1.2511323483666645 1.0817582641902792 1.067369335481584 0.9182423309051189 1.2194966514102226 1.2762458264528371 0.829146313269494 1.1667147594521834 1.0 13.434620661620484 -8.770366723465353 24.999915190948222 0.9193190914818966 1.1324762888571225 0.11140376684725961 0.12625472236636479 133.41476881004343 373610.3035595192 0.019810517398474253 0.02123973429400816 1.6968102404491958e-09 8.770366723465353 0.21315719737522587 CGGPGDAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 CGGPGDASPR 10 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 CGGPGDAS(1)PR;CGGPGDAS(1)PR 91.54899999999999 0.00063866 22694000.0 1823.33 1750.79 1740.67 1477.06 1893.87 1969.31 1659.28 1837.9699999999998 2099.8 2341.1 2259.9 True False 2131.063527861432 1839.8977327712846 1987.5231802586275 1838.9397663077423 1615.2842317944182 2177.70107707782 1960.7496979317916 2098.5078760470565 1624.1986526915712 1812.243884035436 1698.70445993298 1.2545228308551741 1.0831182092992653 1.1700229363835557 1.0825542698465012 0.9508918531114865 1.2819776061362307 1.1542618178615662 1.2353578421344995 0.9561396293476805 1.0668388332287864 1.0 10.730219159387195 -8.776261769545332 24.999609735436945 0.9792881418471919 1.1453649619067392 0.31205528679025674 0.09226146943265394 159.5667538088941 269126.0954885445 0.014997759206055223 0.015998038890971115 1.6739336140093512e-09 8.776261769545332 0.16607682005954727 CGGPGDAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 CGGPGDASPR 10 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 CGGPGDAS(1)PR;CGGPGDAS(1)PR 77.66199999999999 0.0013862 29698000.0 1227.23 1464.12 1713.55 1482.23 1357.2199999999998 1424.17 1923.56 1475.82 1055.02 1751.6 1575.87 True False 1351.8174861610232 1587.5065307295858 1829.841807413227 1573.7839807114292 1261.8935493548156 1412.5720317020587 1996.76212841242 1446.3836123416067 1010.6811783308776 1641.0036770700729 1382.04798026299 0.9781263063701926 1.1486623861115872 1.3240074393546208 1.138733244566483 0.9130605936811903 1.0220861011158673 1.4447849545950322 1.0465509396181558 0.7312923956073906 1.1873709889274655 1.0 10.432591986991659 -8.539376047527401 15.906513420833496 0.8739376717084307 1.1409372834304463 0.07786423636636819 0.17912495962739342 2.9602908134127635 2853.2112595897643 0.028431226336650812 0.0322781989213572 2.8881779796646605e-09 8.539376047527401 0.2669996117220156 CGGVEQASS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 CGGVEQASSSPR 12 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 CGGVEQAS(0.074)S(0.851)S(0.074)PR 88.18700000000001 0.00027843 56896000.0 482.98 548.78 601.73 630.65 991.49 562.53 515.69 678.79 937.63 906.66 611.58 True False 564.4952162727069 576.7105579711022 687.0643621461983 785.1592783109543 845.6431344188605 622.0565512228071 609.384197800519 775.0105612071911 725.2583020874356 701.844876297283 459.7078072506801 1.2279435053511847 1.2545154745579947 1.494567530308529 1.7079528907865698 1.839523108115779 1.35315637761966 1.325590273188943 1.6858764393021837 1.5776506090355562 1.5267195057980922 1.0 8.844573357530908 -10.729469839936604 0.9176696995618968 0.9909426937897399 1.5041177440405853 0.0 0.24170345832072562 0.4312589182346085 0.6274939264366244 0.1498317471536303 0.03611894138953057 1.8643616464253312e-11 10.729469839936604 0.5131750502508454 CGGVEQASSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 CGGVEQASSSPR 12 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 CGGVEQASS(0.024)S(0.976)PR 128.68 8.5151e-08 57344000.0 1015.3 1116.6 957.52 1020.2 1361.8 1223.2 1036.3 874.46 1619.9 1469.4 1359.3 True False 1186.6578182982294 1173.430170615789 1093.3107341203333 1270.1490457985185 1161.4810239655521 1352.6382121055549 1224.5822959155266 998.4173829214349 1252.9952364487447 1137.4615194573785 1021.7482952285052 1.1613993620932281 1.148453269847014 1.0700392055714893 1.2431134475389172 1.1367584652595843 1.3238468010392412 1.1985166029972767 0.9771656949015486 1.2263247634472667 1.1132502249029885 1.0 9.996824120907927 -10.947207985501063 1.0040750359410309 0.9917563268066169 1.1690842901829428 0.13029359821093411 0.09208843289214139 0.561434276293074 0.923888248407709 0.07636901468741314 0.014700017851602947 1.1292549800732713e-11 10.947207985501063 0.17732796337632595 CGGVEQASSS(ph)PR ddPTM_A549_PD325901_60min_R1 3 CGGVEQASSSPR 12 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 CGGVEQASSS(1)PR;CGGVEQASS(0.006)S(0.994)PR;CGGVEQAS(0.001)S(0.006)S(0.993)PR 146.58 6.5953e-12 143550000.0 6488.1 7047.799999999999 7243.0 6411.5 8072.5 7123.999999999999 6529.8 8001.8 6555.0 6978.3 7341.0 True False 7146.767135713228 7641.742840256249 7734.553535697232 6807.523793427014 7505.515448613161 7065.984505954668 6778.295112243669 7842.19782170934 6279.516145626534 6537.688947075874 6438.103538433132 1.1100733458307455 1.186955567681978 1.2013714115538476 1.0573802910730743 1.1657960148991033 1.0975257641902334 1.0528403390501127 1.218091286493651 0.9753673745909974 1.0154681278498014 1.0 12.652420063276821 -8.779800943567352 24.99140998257052 0.9883679061807774 1.1343990495460619 0.5773794734802138 0.052924902987644275 107.03558514076954 145682.48981600706 0.008709272402666607 0.009280110344066245 1.6603477441098293e-09 8.779800943567352 0.14603114336528444 CGHTNNLRPK ddPTM_A549_MK2206_60min_R1 2 CGHTNNLRPK 10 1 P62987;M0R2S1 P62987 UBA52 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 ; 119.16 0.00021642 9922000.0 1474.9099999999999 1918.25 1575.77 1078.6399999999999 2026.3200000000002 1822.02 1674.7800000000002 1488.5700000000002 2057.8 2594.2 1996.06 False True 1723.8387499125795 2015.8807314917926 1799.2378806759114 1342.9068484219895 1728.2510122498727 2014.824947041008 1979.065847296542 1699.5793560544334 1591.7115856313524 2008.1684182498527 1500.3832135465404 1.1489323089918106 1.3435772363293386 1.1991855576835941 0.8950425706561225 1.1518730659247436 1.3428735598010675 1.319040248803179 1.132763510488125 1.0608700305763445 1.3384370073716245 1.0 10.551115311832602 -8.72498053681035 2.730141967216436 1.0260869740082228 1.198521840297295 0.0 0.1515679030972149 0.26476756947258384 3.923798338316616 0.022628394263101453 0.024861755589056622 1.8837335083404087e-09 8.72498053681035 0.17243486628907223 CGHTNNLRPK ddPTM_A549_PD325901_60min_R1 1 CGHTNNLRPK 10 1 P62987;M0R2S1 P62987 UBA52 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 82.749 0.003654 4909700.0 721.66 711.69 986.46 940.75 750.39 636.87 847.12 503.8 482.44 885.88 835.89 False True 794.9223919419867 771.6666139762725 1053.40710766587 998.8579909017341 697.685195104965 631.6835418735756 879.3576151618512 493.75131377654554 462.1647245302924 829.9453856147729 733.0808291432869 1.0843584504466866 1.052635102841359 1.4369590170526374 1.3625482364189594 0.9517166011834098 0.8616833461758794 1.1995370499451068 0.6735291582424366 0.6304417005017033 1.1321335282832135 1.0 9.517828467772505 -6.916549101399067 4.83080078379068 0.8442550426627294 1.234000121048082 0.34005686920808276 0.19604897265821036 0.1525356037123516 6.368663206393264 0.029989153852379456 0.057634899317589035 1.2118556684462083e-07 6.916549101399067 0.38974507838535255 CGS(ph)PSDSSTTEEMEVAVSK ddPTM_A549_MK2206_60min_R1 1 CGSPSDSSTTEEMEVAVSK 19 0 P31751-2;P31751;M0R0P9;M0R275;M0QZK3;J3QLS6;C9JHS6;J3QKW1 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 CGS(0.653)PS(0.171)DS(0.063)S(0.074)T(0.025)T(0.013)EEMEVAVSK 54.103 0.0038694000000000003 15866000.0 1663.2 2328.1 1915.0 2133.8 1944.3 1583.3 1473.4 1776.6 2457.6 2849.9 2717.1 True False 1943.9074986640567 2446.5903458809057 2186.5757956391903 2656.581095789922 1658.2960455986347 1750.8437550905196 1741.0977080014825 2028.4384906093142 1900.9575239807625 2206.1056106584897 2042.3690818549062 0.9517905044364334 1.1979178335675158 1.0706075679785134 1.3007350725154831 0.8119472921576685 0.8572611927225124 0.8524892603741312 0.9931791998961618 0.9307610171293271 1.0801699018352138 1.0 10.996027887629321 -6.768832209623095 24.9999956379311 0.9423319070140045 1.1308341725431577 0.4394227464755168 0.10719721392225498 114.90250910446387 388561.8941435808 0.014109546260224214 0.02704515542906211 1.7028162671481027e-07 6.768832209623095 0.18850226552915317 CGS(ph)PSDSSTTEEMEVAVSK ddPTM_A549_PD325901_60min_R1 2 CGSPSDSSTTEEMEVAVSK 19 0 P31751-2;P31751;M0R0P9;M0R275;M0QZK3;J3QLS6;C9JHS6;J3QKW1 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 CGS(0.681)PS(0.161)DS(0.045)S(0.045)T(0.054)T(0.015)EEMEVAVSK;CGS(0.791)PS(0.17)DS(0.009)S(0.011)T(0.015)T(0.003)EEMEVAVSK 96.14299999999999 7.645e-07 40688000.0 6422.8 6879.799999999999 8166.3 6831.3 7435.799999999999 6757.7 7428.6 8519.7 7023.400000000001 7441.1 7242.0 True False 7074.837927784547 7459.584890660198 8720.514225951169 7253.2538859920405 6913.5350601174 6702.667531708296 7711.299438085898 8349.767899924651 6728.23092253141 6971.2676760939285 6351.279910820424 1.1139231819607611 1.1745010447345579 1.3730325774328374 1.14201452114163 1.0885262745764177 1.0553254817645852 1.2141331426675845 1.314659095043108 1.0593504013370265 1.0976161929530543 1.0 12.632831637952453 -8.947978397067299 10.702169079931332 1.026119516488317 1.1828971525031169 0.28772257698916215 0.09143498025430519 0.39253726384372745 78.95484669016223 0.01617870531677274 0.017159371874813586 1.127253527291876e-09 8.947978397067299 0.15677763601479988 CGS(ph)SEDLHDVR ddPTM_A549_PD325901_60min_R1 1 CGSSEDLHDVR 11 0 Q7Z4V5-2;Q7Z4V5-4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 CGS(0.5)S(0.5)EDLHDVR 126.1 5.9522e-07 3645100.0 582.24 705.24 629.31 465.59 639.8 543.09 600.63 556.34 480.74 695.88 528.51 True False 641.3485761775664 764.6730498399952 672.0187609484501 494.3484368683902 594.8626551901767 538.6672551009157 623.4873033273475 545.2433622597129 460.53616961838287 651.9420180403764 463.5066205009254 1.3836880592653498 1.6497564781568606 1.4498579550431867 1.0665401851954845 1.2833962426411318 1.1621565502532885 1.3451529616848326 1.1763442810600033 0.9935913517711306 1.4065430550610114 1.0 8.856446135520114 -6.05588608827305 0.2787865530720533 0.9600137899853455 1.8091514161193343 0.15176434388314153 0.18099077059841506 2.439848747098864 0.1966656643828477 0.06770279474593743 0.6744509355387618 8.792531071560894e-07 6.05588608827305 0.8491376261339888 CGS(ph)SEDLHE ddPTM_A549_MK2206_60min_R1 4 CGSSEDLHE 9 0 K7EPS6 K7EPS6 HDGFRP2 1 CGS(0.5)S(0.5)EDLHE;CGS(0.5)S(0.5)EDLHE;CGS(0.926)S(0.074)EDLHE;CGS(0.5)S(0.5)EDLHE 67.563 0.0048586 4786060.0 997.16 968.78 834.97 710.87 533.95 524.77 345.43 704.04 1004.0 969.79 1320.45 True False 1165.456229778649 1018.0867640060571 953.3813013497945 885.0331819121668 455.40666231928805 580.3008130858659 408.19015968165616 803.8398260320728 776.5956030585469 750.7137654515939 992.5458224339592 1.1742089921054448 1.0257327581203912 0.9605413471106816 0.8916799223857034 0.45882683904962923 0.5846589648252509 0.4112557329400435 0.8098767914420976 0.7824279600050597 0.7563517456661745 1.0 9.954989897846165 -10.434260511997952 0.9469196141110664 0.9901589026598854 0.7798486118016668 0.0 0.23193374696725708 0.9938685883305938 1.6955622924126141 0.1270168995633578 0.04456988730190408 3.679082173107999e-11 10.434260511997952 -0.21031029085821862 CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVK ddPTM_A549_MK2206_60min_R1 4 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK 31 0 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 1 CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK 212.43 2.8982999999999994e-90 260159000.0 6895.599999999999 8391.300000000001 7776.299999999999 6362.349999999999 10681.199999999999 9609.199999999999 8079.18 8403.5 12263.2 9771.8 11074.8 True False 8059.408698766153 8818.381327859814 8879.09627134676 7921.12603561674 9110.009629300079 10626.039165929269 9547.062427400177 9594.721859639405 9485.604780306343 7564.343593190155 8324.621511069417 0.9681411566939583 1.0593131851260544 1.0666066030197343 0.9515298713681888 1.0943452044259687 1.276459134123949 1.1468464259552527 1.1525715429681829 1.139463790358894 0.9086711729934742 1.0 13.02316896447166 -6.879051471883659 11.168806590430135 1.0981485532008184 1.018821754590479 0.17926853301678958 0.09312295900122008 0.5608214323325154 52.18369358952839 0.013168258287704451 0.024899235553717005 1.321139045632122e-07 6.879051471883659 -0.07932679861033942 CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVK ddPTM_A549_PD325901_60min_R1 4 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK 31 0 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 1 CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK 213.52 2.5368999999999994e-90 538610000.0 7980.900000000001 9563.7 9437.4 9111.7 10162.0 7614.8 8178.1 9543.400000000001 7609.9 9317.8 8713.5 True False 8791.115092771943 10369.666562808075 10077.8787156964 9674.509014827881 9448.256176996834 7552.7875934788935 8489.322070728032 9353.049400347534 7290.082367140103 8729.472517814298 7641.7947394274715 1.1503992703984325 1.3569674293011666 1.3187842724563212 1.2659995910270552 1.236392300391034 0.9883525861419242 1.1109068432481946 1.2239336071264681 0.9539751610347861 1.1423327654660764 1.0 12.899695791718008 -7.556974469973256 0.623779732279535 0.9802860813687118 1.301367439683538 0.36852060963680566 0.10318815324088183 0.35595962139879533 0.2757745164619459 0.02047428137237432 0.04760050110705012 2.7734831392297816e-08 7.556974469973256 0.3210813583148262 CGSS(ph)EDLHDVR ddPTM_A549_MK2206_60min_R1 2 CGSSEDLHDVR 11 0 Q7Z4V5-2;Q7Z4V5-4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 CGS(0.075)S(0.925)EDLHDVR;CGS(0.458)S(0.542)EDLHDVR 113.24 9.8664e-06 8994200.0 988.6800000000001 806.0699999999999 705.6 611.4 1030.42 721.56 695.4 655.7 1004.38 964.51 1268.97 True False 1155.5450130947438 847.095519996658 805.664690027683 761.1930274467893 878.84658298912 797.9150002672365 821.745178596601 748.6474829970323 776.8895336652821 746.6265211187125 953.8497272096795 1.2114539430388984 0.8880806859112785 0.844645301083761 0.7980219585254025 0.921367965958361 0.8365206567720025 0.8615038146527261 0.7848694208752038 0.8144779114608929 0.7827506784562782 1.0 9.897618186732956 -5.26172406768291 7.127178582837096 0.8828641222028947 1.2159293576252663 0.6800387067615703 0.06793658114702676 0.05871049947085611 24.004547747692484 0.011243542473485012 0.09391188792032902 5.473636240981077e-06 5.26172406768291 0.33306523542237165 CGSS(ph)EDLHDVR ddPTM_A549_PD325901_60min_R1 1 CGSSEDLHDVR 11 0 Q7Z4V5-2;Q7Z4V5-4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 CGS(0.069)S(0.931)EDLHDVR 122.42 2.6164e-06 4614800.0 508.14 621.33 581.63 585.01 682.41 601.03 723.18 565.66 671.1 545.42 633.6 True False 559.7259987271033 673.6916596578251 621.1029094253183 621.144739045892 634.4798757866961 596.135410950861 750.70101063928 554.3774675483143 642.8960008131146 510.98208811804034 555.6712167213225 1.0072970884288475 1.2123925792537347 1.11775253195598 1.1178278096009524 1.1418260595363847 1.0728203891291925 1.3509805583753456 0.9976717362100527 1.1569719313633924 0.9195763119296236 1.0 9.118087701668522 -10.825752880156 0.7760068100460701 0.9877798160696102 1.1358558325498394 0.3038793283060405 0.09533047943864559 0.9198370720002741 0.8432776130748515 0.08811009214174945 0.015700205469993497 1.4936440729096972e-11 10.825752880156 0.14807601648022917 CHELS(ph)PR ddPTM_A549_MK2206_60min_R1 2 CHELSPR 7 0 Q9UGI8-2;Q9UGI8 Q9UGI8-2 TES Testin 1 CHELS(1)PR;CHELS(1)PR 91.853 0.01235 9209300.0 2415.8 3012.3 2665.7 1271.57 3061.0 2467.6400000000003 1770.96 2134.34 3083.0 2908.6000000000004 3953.5 True False 2823.527979360645 3165.613203426419 3043.736343830492 1583.1047070829457 2610.7309548821813 2728.764026913138 2092.7205083224567 2436.889231142116 2384.7054225393417 2251.5452398895686 2971.7368389508556 0.950127192405592 1.0652400851698598 1.0242280890878128 0.5327203561005242 0.8785202379507722 0.9182387858665517 0.7042078830443386 0.8200218805385329 0.80246184362046 0.757652969259706 1.0 11.537090648872905 CHELS(ph)PR ddPTM_A549_PD325901_60min_R1 2 CHELSPR 7 0 Q9UGI8-2;Q9UGI8 Q9UGI8-2 TES Testin 1 CHELS(1)PR;CHELS(1)PR 80.438 0.015868 10651400.0 2058.3 1655.01 1680.78 1674.67 1991.5300000000002 1231.15 1845.78 1569.19 1655.6100000000001 1804.6799999999998 1875.95 True False 2267.2571007596252 1794.4835009580993 1794.8478381512084 1778.1105624484796 1851.651803205521 1221.1239225864813 1916.022167949571 1537.8912744442598 1586.030469238863 1690.7321968113852 1645.2200426268394 1.3780874545751405 1.0907255287827267 1.0909469807366716 1.0807737058742979 1.1254736480410745 0.7422252895951685 1.1645993352295634 0.9347632745762 0.964023308825322 1.0276632626672106 1.0 10.684064837118866 -2.000000000762692 0.5845708120716676 0.9831658991370597 22.08490335467561 0.5060544874910192 0.10572553388032106 76.01285709682287 0.5659282878134978 0.016079528968162875 2046.5215792369934 0.009999999982438364 2.000000000762692 21.10173745553855 CIACQAAKLS(ph)PR ddPTM_A549_PD325901_60min_R1 1 CIACQAAKLSPR 12 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 CIACQAAKLS(1)PR 63.211999999999996 0.0019925999999999998 9201600.0 3025.1 2531.3 3035.3 3357.1 3366.9 3675.1 3373.6 3003.2 2634.4 3136.7 3129.3 True False 3332.205925039082 2744.621534598124 3241.2937107416546 3564.460442472718 3130.420559174439 3645.1712040755197 3501.984194104754 2943.2988200351774 2523.685329372777 2938.6482266874277 2744.4159382671014 1.2141767137320763 1.0000749144210088 1.1810504616105295 1.2988047448534406 1.1406509179330417 1.3282138298530577 1.2760398834864666 1.0724681995155794 0.9195710075078124 1.0707736337309606 1.0 11.422283434758853 -8.510146891106356 4.418692749209257 0.9626875061201678 1.2018831636726466 0.5025508664872429 0.09105218892556445 0.10275282688638901 4.9508740316716935 0.015087930221841175 0.01774995632031272 3.089250380883331e-09 8.510146891106356 0.23919565755247874 CKDAGLAK ddPTM_A549_PD325901_60min_R1 2 CKDAGLAK 8 1 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;Q04828;H0Y804;P42330-2 S4R3Z2;B4DK69;Q04828;P42330-2 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 75.378 0.0049023 10750000.0 7466.6 8958.1 9441.2 7933.8 8387.8 8412.1 8763.2 8978.099999999999 7451.0 8306.4 8302.900000000001 False True 8224.6037353796 9713.030525454687 10081.936606547666 8423.852807032868 7798.669864339107 8343.594646622863 9096.688371407034 8799.0247523168 7137.860381550466 7781.93248642091 7281.695936419623 1.1294901362530114 1.3338967474424015 1.38455885752144 1.1568531397885915 1.0709963629947556 1.1458312348490305 1.2492540818560784 1.2083757450387638 0.9802469704688218 1.068697808088819 1.0 12.830058783728195 -8.759059154741749 24.180075433691226 0.9906721661889717 1.2126386760260552 0.4797929594437108 0.08865362176936172 22.15316095319646 225047.31307182778 0.0155155416415897 0.017185381424083473 1.7415696400783483e-09 8.759059154741749 0.22196650983708355 CLHEDPQS(ph)PPPLPAEKPIGNTFSTVSGK ddPTM_A549_MK2206_60min_R1 1 CLHEDPQSPPPLPAEKPIGNTFSTVSGK 28 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 CLHEDPQS(1)PPPLPAEKPIGNTFSTVSGK 91.594 6.822499999999999e-10 16511000.0 3443.4 3954.3 3216.4 2802.8 5052.1 3741.6 3617.1 3452.1 5252.9 3927.6 5223.9 True False 4024.5617369527467 4155.556979819108 3672.53388464433 3489.486125822472 4308.942782476403 4137.533628526928 4274.280249499231 3941.4457466128647 4063.1265371576123 3040.3524321633327 3926.6614576945444 1.02493219247775 1.0582926551195362 0.935281516935402 0.8886648781459375 1.0973553052384373 1.0537026614349871 1.0885278233303015 1.0037651040400617 1.0347534619251821 0.7742843290463881 1.0 11.939087504169018 -6.778592272017486 24.999780405009048 1.0288771143269322 0.9796490805441062 0.0 0.09227542625639809 344.0418239359547 501429.2647905104 0.00783302179837166 0.014829444697902872 1.6649750426592453e-07 6.778592272017486 -0.04922803378282603 CLIKS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 CLIKSPDR 8 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 CLIKS(1)PDR;CLIKS(1)PDR 52.79 0.0073588 7752200.0 2061.55 2044.71 2074.45 1792.17 1982.08 2068.63 2218.56 2628.7 2795.0 2439.92 3005.2 True False 2409.48923994161 2148.7770053374625 2368.6382032708707 2231.25173045357 1690.5186576454998 2287.5310535545404 2621.6436344942113 3001.3262750561184 2161.936962697847 1888.7403774019665 2258.925900699407 1.0666526242386196 0.9512383760229407 1.048568349469761 0.9877489694384094 0.7483727806751354 1.0126631656426963 1.1605708862262811 1.3286519376872212 0.9570641347856826 0.836123210954895 1.0 11.14142123160077 -7.498190106149486 24.850678754782926 1.0260154266251311 0.9578167633263494 0.07832447706751722 0.14015292141699554 1916.6930712767196 1929275.006043763 0.02099707358656336 0.033475448879834335 3.175483744137044e-08 7.498190106149486 -0.06819866329878177 CLIKS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 CLIKSPDR 8 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 CLIKS(1)PDR;CLIKS(1)PDR 51.092 0.0083464 11166400.0 3054.8 3272.8 3741.2 2870.6 3106.8 2309.8 2969.5 3515.8 2725.3 2633.2 3305.1000000000004 True False 3364.9210471750976 3548.6103418925977 3995.10032966319 3047.910442394383 2888.589085878151 2290.989754611751 3082.5059474727495 3445.674610908258 2610.76511848604 2466.9393026152775 2898.5936527551185 1.1608805684014156 1.2242524365288792 1.378289200994365 1.0515135294998452 0.9965484755452154 0.7903797596583299 1.0634488019881028 1.1887401352835842 0.9007006263208033 0.8510814547152711 1.0 11.501137384103261 -6.454633082042637 4.715089960909963 0.9700917065556534 1.250537376497246 0.5562086689078761 0.11078277718621046 0.11991817599416181 5.124886342866154 0.01522520479735351 0.03583481941560511 3.5104833533382125e-07 6.454633082042637 0.2804456699415927 CLIKS(ph)PDRLADINYEGR ddPTM_A549_MK2206_60min_R1 2 CLIKSPDRLADINYEGR 17 2 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 CLIKS(0.989)PDRLADINY(0.011)EGR;CLIKS(1)PDRLADINYEGR 58.952 0.001091 12734800.0 5121.6 6952.9 5413.9 5059.700000000001 8267.0 6855.200000000001 5705.0 5856.8 9465.8 7543.0 7150.700000000001 True False 5986.000868902015 7306.772911762959 6181.672428204185 6299.326727138564 7050.935251228677 7580.61271388652 6741.524653283876 6687.019335697753 7321.811413776488 5839.031061158979 5374.983840719841 1.1136779283973333 1.3594036983717526 1.1500820488748313 1.1719712865769156 1.3118058509891974 1.4103507914679223 1.254240915518924 1.2441003608305172 1.3622015676229307 1.086334626147823 1.0 12.39204470207146 -10.893256731287876 1.1018721967872345 0.9974787157013841 1.2730660961381877 0.4515802412889732 0.09224101304856021 0.3080177241858662 0.6540538626598519 0.06605226475123709 0.015223751581030894 1.2786252269802016e-11 10.893256731287876 0.27558738043680353 CLIKS(ph)PDRLADINYEGR ddPTM_A549_PD325901_60min_R1 4 CLIKSPDRLADINYEGR 17 2 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 CLIKS(1)PDRLADINYEGR;CLIKS(1)PDRLADINYEGR;CLIKS(1)PDRLADINYEGR;CLIKS(1)PDRLADINYEGR 141.1 1.2193000000000002e-16 54714000.0 11023.8 11622.37 13659.599999999999 10822.6 12827.4 12201.5 12929.83 14106.5 9531.8 11321.99 11886.5 True False 12142.928060707365 12601.827908611065 14586.622597847558 11491.08742209206 11926.447676127651 12102.135029394432 13421.881756124467 13825.134791164824 9131.211593727385 10607.117619177097 10424.535854731697 1.1648411238564342 1.2088622538423228 1.399258710518674 1.1023116599360396 1.1440746947706295 1.1609279490272244 1.287527995793911 1.3262110643410177 0.8759345951678729 1.017514618107676 1.0 13.347695529647801 -8.766146895161686 24.999624475390398 0.9414135473610206 1.2228336586435404 0.6243060668138121 0.08925375530458253 50.67068424039554 269089.66246578534 0.016029991740918178 0.017337732429647087 1.7133776790038334e-09 8.766146895161686 0.28142011128251987 CLS(ph)DPGPHPEPGEGEPFFPK ddPTM_A549_MK2206_60min_R1 2 CLSDPGPHPEPGEGEPFFPK 20 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 CLS(1)DPGPHPEPGEGEPFFPK;CLS(1)DPGPHPEPGEGEPFFPK 108.57 2.2891e-10 18937000.0 7020.299999999999 7529.599999999999 6444.9 6049.700000000001 8393.3 6463.6 6477.6 6353.5 9592.0 9246.4 9040.5 True False 8205.155010143859 7912.824478478096 7358.883731235002 7531.876771581358 7158.656688537281 7147.573861809567 7654.496072587491 7254.128081777703 7419.4273152764745 7157.631818096302 6795.49434489319 1.2074404883156187 1.1644222004870888 1.0829063137643842 1.1083633344852328 1.0534416372396818 1.0518107291459913 1.126407540658148 1.067490856971896 1.0918156853227565 1.0532908210681182 1.0 12.73036278973635 -2.0000000000000004 0.07031620424095288 0.9114046300067916 1.5444648739241134 0.5689435376831664 0.036377214939698164 107.75576106711686 0.5436220623985244 0.8375952325638043 6.738578509759084 0.00999999999999999 2.0000000000000004 0.6330602439173217 CLS(ph)DPGPHPEPGEGEPFFPK ddPTM_A549_PD325901_60min_R1 2 CLSDPGPHPEPGEGEPFFPK 20 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 CLS(1)DPGPHPEPGEGEPFFPK;CLS(1)DPGPHPEPGEGEPFFPK 109.56 1.8484e-10 25646000.0 10282.6 11399.900000000001 13454.8 10435.7 13508.099999999999 12003.4 12488.4 12188.599999999999 11166.3 13972.9 12842.900000000001 True False 11326.481982349962 12360.609580952536 14367.923638285123 11080.289487805705 12559.337656415157 11905.648290114583 12963.652895914694 11945.488811228277 10697.019242854238 13090.648709369967 11263.304717850808 1.0056091232619346 1.0974229935697868 1.2756401427650197 0.9837511960628172 1.115066845036192 1.0570297606568122 1.1509635245301555 1.0605669570757772 0.9497229730365827 1.162238706782306 1.0 13.459342564032537 -8.60982540642009 4.78655561330481 0.976536016548826 1.0998767555993654 0.0 0.09236012613061441 0.16052562813009166 6.5333938381420245 0.0120224110226573 0.013662932573291915 2.455695947742878e-09 8.60982540642009 0.12334073905053933 CLS(ph)ETHGER ddPTM_A549_MK2206_60min_R1 2 CLSETHGER 9 0 O00257;O00257-3 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 CLS(0.996)ET(0.004)HGER;CLS(0.976)ET(0.024)HGER 60.49 0.0024785 7073300.0 694.8199999999999 608.56 515.38 649.13 583.84 746.0 622.61 849.9100000000001 702.19 827.58 777.0 True False 812.0886292819623 639.5331046300778 588.4686337109799 808.166879140553 497.9579094081714 824.941224845277 735.7301778056222 970.3873452402127 543.1450861670129 640.6291032207282 584.0494558909361 1.3904449718956842 1.094998202942428 1.0075664445458692 1.3837302149485573 0.8525954512680153 1.4124509774379868 1.2597052704780032 1.66148146437349 0.929964201984358 1.0968747539426826 1.0 9.189946727968456 CLS(ph)ETHGER ddPTM_A549_PD325901_60min_R1 2 CLSETHGER 9 0 O00257;O00257-3 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 CLS(0.995)ET(0.005)HGER;CLS(0.997)ET(0.003)HGER 60.49 0.0024785 9004300.0 735.78 1054.04 1037.45 567.36 941.5999999999999 667.1700000000001 907.45 825.71 526.98 828.78 997.8299999999999 True False 810.475843947392 1142.867649953701 1107.857595693648 602.4045386319508 875.465264343654 661.7367887195089 941.9835063256929 809.2405662930361 504.8328632223144 776.4506893595208 875.1032357655263 0.9261488368722586 1.3059803726516206 1.2659736022167851 0.688381112092423 1.0004136981367815 0.7561813985759431 1.0764255779509955 0.9247372575249655 0.5768837807812409 0.887267533275996 1.0 9.773309411224313 -6.255858764237208 24.968897176521548 0.8300014835111967 1.1800288945503266 0.38087512149148994 0.16738595122938474 358.11537218661476 1602280.008469657 0.027210071153576224 0.06984205688983255 5.548061106546606e-07 6.255858764237208 0.3500274110391298 CLS(ph)ETHGEREPCK ddPTM_A549_PD325901_60min_R1 1 CLSETHGEREPCK 13 1 O00257;O00257-3 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 CLS(0.961)ET(0.039)HGEREPCK 52.522 0.010074 14149000.0 2026.8 2023.8 2674.0 2036.0 2124.7 2226.5 2387.0 2072.3 1729.1 2512.6 2905.0 True False 2232.559243948701 2194.3527285267173 2855.4737200682603 2161.7590959085087 1975.4684018170797 2208.3681221937236 2477.83859121652 2030.9663508121007 1656.4319401072216 2353.954007197002 2547.7034163122507 0.8763026456118214 0.8613061922658951 1.1208030345233437 0.8485128536027209 0.7753918251114685 0.8668073795615865 0.9725773319420128 0.7971753453751236 0.6501667068079978 0.9239513485460182 1.0 11.314981624768166 -6.484910155284802 24.973062411335995 0.8370244355055072 0.9504881588815408 0.1218003633031961 0.11125128974071442 963.0198915614003 633405.9444854279 0.019984956698370807 0.04643067028742092 3.274084205235802e-07 6.484910155284802 0.11346372337603361 CLT(ph)PHLK ddPTM_A549_MK2206_60min_R1 1 CLTPHLK 7 0 A0A087X211;Q8TCG1-2;Q8TCG1 A0A087X211 KIAA1524 Protein CIP2A 1 CLT(1)PHLK 60.59 0.025525 2439900.0 575.55 820.34 509.22 457.74 908.13 648.46 598.66 618.37 798.36 972.23 792.5 True False 672.6887691534979 862.09180204456 581.4350530837542 569.8863205487294 774.5452799925363 717.0796067870889 707.4287728194436 706.0258411787021 617.5327347189459 752.6025677569401 595.7003781126982 1.1292401245148018 1.447190288473284 0.9760528521500363 0.9566660379740682 1.3002262688609594 1.2037588578656693 1.187558038926757 1.1852029428209157 1.0366498954985006 1.263391119779612 1.0 9.218443064587515 -8.812418700823248 4.653108157575305 1.0159879562929544 1.1745430214881072 0.0 0.14827822480190422 0.21827001830261553 9.810415564375543 0.02243715507649182 0.02400149287390185 1.5402148246285453e-09 8.812418700823248 0.15855506519515283 CLT(ph)PHLK ddPTM_A549_PD325901_60min_R1 2 CLTPHLK 7 0 A0A087X211;Q8TCG1-2;Q8TCG1 A0A087X211 KIAA1524 Protein CIP2A 1 CLT(1)PHLK;CLT(1)PHLK 73.931 0.016751 6880000.0 1826.67 2014.23 2113.8 1403.9 1829.99 1508.1100000000001 1943.8500000000001 1685.6 942.28 1767.21 1826.49 True False 2012.1121936766194 2183.9762310408005 2257.2551793119997 1490.6157145117666 1701.4578155227734 1495.8284521722774 2017.8242754655353 1651.9793856723807 902.6792484669672 1655.6280590060549 1601.8433090740673 1.2561229817413944 1.3634143980682045 1.4091610374904822 0.9305627498443684 1.0621874223804622 0.9338169618081615 1.259688924650141 1.0312989893045745 0.5635253107176592 1.0335767859610923 1.0 10.645517316130436 -6.8731933652828845 0.5611237605066314 0.8159348561780738 1.3857552349043323 0.3116776299893018 0.18944547051654112 0.8076210979472136 0.41851872443702376 0.04744974370455086 0.2182266754633128 1.3390803425218418e-07 6.8731933652828845 0.5698203787262585 CLT(ph)PQR ddPTM_A549_MK2206_60min_R1 2 CLTPQR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CLT(1)PQR;CLT(1)PQR 75.109 0.048734 320490000.0 8526.400000000001 8840.0 7191.400000000001 6513.200000000001 9854.4 9702.5 8204.7 8657.6 11055.099999999999 10174.7 10327.5 True False 9965.44786953415 9289.918241307156 8211.248656271373 8108.934292388662 8404.830814044739 10729.21211000175 9695.387786642981 9884.841312788014 8551.137501367075 7876.228203363959 7762.896725500181 1.2837279976685576 1.1967076942800092 1.0577557510585462 1.044575830276318 1.082692596751401 1.3821144978983915 1.2489394267986074 1.273344430863997 1.1015395159486816 1.0145991221925572 1.0 12.922379379304228 -9.28687149279605 1.623705461700136 1.030477570331125 1.1891566883499238 0.3285932628887913 0.10070773161763434 0.3134609030317696 1.7064080455863382 0.023925013711040707 0.021064731745153022 5.165691988515872e-10 9.28687149279605 0.15867911801879875 CLT(ph)PQR ddPTM_A549_PD325901_60min_R1 2 CLTPQR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CLT(1)PQR;CLT(1)PQR 73.665 0.049633 403700000.0 9199.6 11091.8 12525.6 9024.5 10149.1 6917.1 9510.7 9088.6 6707.299999999999 9747.0 9288.5 True False 10133.536619612423 12026.544912675487 13375.662538551598 9581.92286887345 9436.26222849424 6860.769430957198 9872.63489295473 8907.320743131226 6425.415506264049 9131.572756566578 8146.073384652788 1.2439780666233646 1.4763609833583762 1.6419766809063323 1.1762627730466808 1.158381686847085 0.8422179750900471 1.2119501539913433 1.0934496072565008 0.788774566942834 1.120978454941306 1.0 12.991889095713184 -6.749645744968594 1.696607677199713 0.9360747943196394 1.4512252687358815 0.5344485457075843 0.1610378308475731 0.16725372165286617 0.9735736839733306 0.0244305540426107 0.06030742636245561 1.7797305485086052e-07 6.749645744968594 0.5151504744162422 CLT(ph)PQRER ddPTM_A549_MK2206_60min_R1 3 CLTPQRER 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CLT(1)PQRER;CLT(1)PQRER;CLT(1)PQRER 70.908 0.008845100000000002 128217000.0 3354.7 3461.8999999999996 3293.7 2916.6 5648.0 3549.0 3243.8999999999996 3114.8 5900.200000000001 4942.3 5103.6 True False 3920.8913454595377 3638.095923029551 3760.7961869957217 3631.16713093115 4817.186681860359 3924.5528243644644 3833.2746402782745 3556.332438674934 4563.814120683306 3825.8309974235763 3836.2352678056354 1.0220674884995586 0.94835057525306 0.9803351266167089 0.9465444315692905 1.2557067920956364 1.0230219343688343 0.999228246621836 0.9270371054977531 1.1896596016890937 0.9972878956435822 1.0 11.905475485020302 CLT(ph)PQRER ddPTM_A549_PD325901_60min_R1 4 CLTPQRER 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CLT(1)PQRER;CLT(1)PQRER;CLT(1)PQRER;CLT(1)PQRER 67.414 0.0042503 157246000.0 5619.6 6000.0 7019.3 6128.1 6372.6 6170.8 6316.799999999999 6897.6 4852.2 6505.799999999999 7238.6 True False 6190.097655069131 6505.641057001831 7495.671908479854 6506.618819075116 5925.010560276523 6120.547050722221 6557.189280685594 6760.021956937479 4648.278907980028 6095.0226777132275 6348.298089266043 0.9750798667654874 1.0247850629449538 1.1807372311570934 1.024939082504139 0.933322675930226 0.9641240793451535 1.0329050697497575 1.064855786839562 0.732208671145976 0.9601034154364831 1.0 12.632154157291545 -8.733211771236139 24.999996446066664 0.8735429323664943 1.0254353500387219 0.2872546648187154 0.08736972543741948 203.813154726424 180508.63085378075 0.01893817943575276 0.021471826258936746 1.848367096044591e-09 8.733211771236139 0.1518924176722276 CLVAGLLS(ph)PR ddPTM_A549_MK2206_60min_R1 4 CLVAGLLSPR 10 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 CLVAGLLS(1)PR;CLVAGLLS(1)PR;CLVAGLLS(1)PR;CLVAGLLS(1)PR 94.309 0.0005809 8126660.0 2128.37 2139.19 2236.31 1843.13 2469.34 2072.52 2041.35 2216.19 2779.91 2616.99 2658.77 True False 2487.5868223494567 2248.0656337807536 2553.4523851414524 2294.6969327412507 2106.1033571149173 2291.8326907725655 2412.2368713376054 2530.341719297229 2150.264823604069 2025.8101414215084 1998.5240306810078 1.2447119895284913 1.1248629484903983 1.277669092761096 1.148195817269868 1.053829388479883 1.1467626386216687 1.2070091899348454 1.2661052258826235 1.075926429001384 1.013653131171609 1.0 10.964719204798923 -8.971453981789459 4.360118371249279 1.03172125273288 1.1790448161049147 0.5396243395729643 0.0639498629887635 0.12298183687117059 4.90400009126325 0.012084500971875441 0.012445006802323764 1.0679379461518868e-09 8.971453981789459 0.14732356337203467 CLVAGLLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 CLVAGLLSPR 10 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 CLVAGLLS(1)PR;CLVAGLLS(1)PR 121.6 4.2533e-05 13482400.0 2474.2 3269.8 3462.4 2768.8999999999996 2955.1000000000004 2946.5 3050.0 3469.7 2184.87 2539.8999999999996 3067.3999999999996 True False 2725.378962590229 3545.3575213640966 3697.379285102594 2939.9286643718433 2747.5439705415597 2922.5046809089613 3166.0694190240383 3400.494111573006 2093.047511990091 2379.5302805379547 2690.1292458506705 1.0131033543440073 1.3179134522374916 1.3744244038852533 1.0928577758509077 1.021342738375655 1.0863807697777768 1.1769209319245426 1.2640634708603766 0.7780471942820091 0.8845412480490326 1.0 11.393459772636739 -8.758472604165167 24.99999505325973 0.8951889499274633 1.1703620322512815 0.5225406044072396 0.11948895039727854 50.22327686572378 423213.46718802315 0.02331106702599786 0.025877448112194914 1.7439233628459205e-09 8.758472604165167 0.2751730823238182 CNELKS(ph)PGSPPGPELPIETALDDRER ddPTM_A549_PD325901_60min_R1 1 CNELKSPGSPPGPELPIETALDDRER 26 2 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 CNELKS(0.538)PGS(0.462)PPGPELPIETALDDRER 41.208999999999996 0.016735 2254000.0 839.6 793.28 978.92 974.14 1039.5 874.38 1044.8 1110.2 1132.2 876.34 972.54 True False 924.8355739191483 860.1324896164023 1045.3553979241663 1034.3104153675413 966.4891060803196 867.2593391797654 1084.560435736497 1088.056190064948 1084.6175713315574 821.0077428428797 852.9237454390075 1.0843121426325482 1.0084518038288222 1.2256141343398905 1.212664579803875 1.1331483163044769 1.0168075913203465 1.271579600798034 1.2756781551496326 1.2716465887267507 0.9625804736158443 1.0 9.736272954771295 -5.749914804583415 24.990824504884547 1.1534332347694038 1.0463819602822968 0.1205749950982884 0.11017226827205905 390.73542244793845 847286.2637631947 0.01655348217867441 0.06301907940905944 1.7786282887891833e-06 5.749914804583415 -0.10705127448710705 CNELKSPGS(ph)PPGPELPIETALDDRER ddPTM_A549_PD325901_60min_R1 1 CNELKSPGSPPGPELPIETALDDRER 26 2 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 CNELKS(0.46)PGS(0.54)PPGPELPIETALDDRER 41.83 0.015052000000000001 2117500.0 848.83 1030.2 899.55 1087.2 1006.9 1148.2 910.05 1008.8 1015.9 907.24 1187.0 True False 935.0025967243814 1117.0185694872139 960.5988724335838 1154.3538747896516 936.1788176164251 1138.8494398844973 944.682450748468 988.6786926117098 973.2052558874142 849.9567115694533 1041.0065250129571 0.8981716965825394 1.0730178367261538 0.9227597035682629 1.1088824585180037 0.8993015846896567 1.0939887623377984 0.9074702492731348 0.9497334251573534 0.9348695061016077 0.8164758732505295 1.0 10.02376339611818 CNGSPLPDSST(ph)CSR ddPTM_A549_PD325901_60min_R1 2 CNGSPLPDSSTCSR 14 0 H0YJ78 H0YJ78 ABCD4 1 CNGSPLPDS(0.008)S(0.011)T(0.491)CS(0.491)R;CNGSPLPDS(0.004)S(0.009)T(0.493)CS(0.493)R 56.482 0.014785 19196500.0 2586.8999999999996 11058.3 1462.4899999999998 3961.9 1636.6 1376.58 2034.6 1323.44 11382.900000000001 1608.79 6760.7 True False 2849.520183624871 11990.22175010722 1561.7433660668012 4206.617564872258 1521.6508619634924 1365.3695888836442 2112.0278163758394 1297.0429509814048 10904.516298101029 1507.2107248421817 5929.1767596083455 0.48059288821288193 2.0222405632749663 0.26339969769596866 0.7094775101881308 0.2566377970597061 0.2302797916542185 0.35620928537056307 0.21875599321263642 1.839128219685819 0.2542023599481526 1.0 12.533616091409906 -8.758018839158185 24.99747161742532 1.3962549937779003 0.5817008391761463 0.01564039759439595 0.6232027617970335 80.49640722792189 588270.9409456154 0.09681692593106458 0.10762811953102087 1.7457464229544971e-09 8.758018839158185 -0.814554154601754 CNREPS(ph)KGR ddPTM_A549_PD325901_60min_R1 3 CNREPSKGR 9 2 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 CNREPS(1)KGR;CNREPS(1)KGR;CNREPS(1)KGR 71.888 0.00059559 107836000.0 12776.5 15786.7 14148.5 10812.8 9270.2 7729.2 7532.6 9362.9 8231.5 12538.099999999999 14191.300000000001 True False 14073.56087443781 17117.10061242846 15108.702291842095 11480.682098349478 8619.093132453845 7666.255957808094 7819.257214996877 9176.14961444704 7885.558680812331 11746.442226234465 12445.860066062674 1.1307825091825952 1.3753248487104004 1.213954054733465 0.9224498779039755 0.6925269195301622 0.6159683555106338 0.6282617009585701 0.7372852953303349 0.6335888913225566 0.9438031734154412 1.0 13.603378310163258 -6.348797829491102 2.972541259554008 0.7776347237119136 1.262129083846403 0.7261071638557819 0.13061717928355746 0.13372325869848373 2.279449072922182 0.02374975559202945 0.06253002960343483 4.4792176986379463e-07 6.348797829491102 0.48449436013448943 CPAPGDTQHSEEAEPEPSQEAESGS(ph)WER ddPTM_A549_MK2206_60min_R1 1 CPAPGDTQHSEEAEPEPSQEAESGSWER 28 0 P98088 P98088 MUC5AC Mucin-5AC 1 CPAPGDTQHSEEAEPEPSQEAES(0.212)GS(0.788)WER 157.75 4.6329e-46 10195000.0 605.32 612.69 335.12 380.86 1144.4 642.35 415.28 791.93 969.95 970.48 795.96 True False 707.4832173468768 643.8733039894216 382.645055161674 474.1707170974548 976.060275977513 710.3230506425795 490.73100052861133 904.1885026839102 750.2578736918704 751.2478939723675 598.3011646215562 1.1824867795374954 1.0761692305858894 0.6395525828596853 0.7925284875508848 1.6313862210094494 1.1872332742188134 0.8202073295963141 1.5112598071839576 1.2539802996479732 1.2556350186073177 1.0 9.224728061044559 CPARLS(ph)DSENEEPSR ddPTM_A549_MK2206_60min_R1 2 CPARLSDSENEEPSR 15 1 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 CPARLS(0.994)DS(0.006)ENEEPSR;CPARLS(0.798)DS(0.202)ENEEPSR 97.384 4.1128e-06 16150400.0 1384.55 1486.9 1662.28 1459.51 1751.9299999999998 1349.87 1289.17 1478.92 2082.99 1855.3899999999999 2192.83 True False 1618.2281910024763 1562.5768589366085 1898.0162995170324 1817.0900155198945 1494.2234177676378 1492.7123474288123 1523.3955017132287 1688.561439002547 1611.1960908515161 1436.256110375682 1648.2897919708125 0.9817619443408719 0.947998869220855 1.151506433372756 1.102409311985881 0.9065295587258585 0.9056128083181413 0.9242279538064412 1.0244323827205062 0.977495643484545 0.8713614058474464 1.0 10.68675419507448 -6.75492220112946 24.994770112562602 0.9756077468341724 1.046466770338494 0.26384486824389153 0.07019856395940749 197.51972279075073 757523.2867258185 0.00946951225931754 0.01935001715979958 1.7582385540004948e-07 6.75492220112946 0.0708590235043216 CPARLS(ph)DSENEEPSR ddPTM_A549_PD325901_60min_R1 2 CPARLSDSENEEPSR 15 1 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 CPARLS(0.808)DS(0.192)ENEEPSR;CPARLS(0.829)DS(0.171)ENEEPSR 120.11 1.7147e-07 9969300.0 1666.38 1806.76 1726.17 1602.79 1710.06 1810.8200000000002 2140.8199999999997 1963.38 1756.2600000000002 2041.44 1904.8200000000002 True False 1835.5496708758799 1959.0220060247725 1843.3182765034499 1701.7906980998034 1589.9512849867347 1796.0732822954571 2222.2900766016537 1924.2188456581857 1682.4504997586662 1912.54313000567 1670.5392156488485 1.0987767624257418 1.172688427588858 1.1034271205584916 1.0187074222252344 0.9517593302167331 1.0751458364285393 1.3302830940957597 1.15185493859287 1.007130203229136 1.1448657487892768 1.0 10.706098134774692 -8.777339700416535 23.241438545154338 1.0033669952383428 1.111997989165532 0.015493872398574027 0.09952322387463652 120.0454501740946 175469.0006480814 0.016759638001849625 0.017878029384347904 1.6697840164915981e-09 8.777339700416535 0.10863099392718922 CPARLSDS(ph)ENEEPSR ddPTM_A549_PD325901_60min_R1 1 CPARLSDSENEEPSR 15 1 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 CPARLS(0.386)DS(0.613)ENEEPS(0.001)R 82.367 6.4093e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 CPFPAGAALACCS(ph)EDEEDDEEHEGGGSR ddPTM_A549_MK2206_60min_R1 1 CPFPAGAALACCSEDEEDDEEHEGGGSR 28 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 CPFPAGAALACCS(1)EDEEDDEEHEGGGSR 89.197 6.3551e-10 4270600.0 907.1 1222.0 1116.2 977.97 1867.4 1016.2 1044.1 1080.5 2046.2 1765.4 1677.6 True False 1060.1963035342503 1284.1945804159902 1274.493944173611 1217.5726939027413 1592.7079337298217 1123.7336095010328 1233.799454950691 1233.6641838924716 1582.7389671099586 1366.5949138764508 1261.0056205954104 0.8407546217229835 1.0183892596843704 1.010696481726887 0.9655569126867481 1.2630458641237388 0.8911408412045287 0.9784250242819112 0.9783177519145164 1.255140295379996 1.0837341971808059 1.0 10.300358990769976 -8.70168013004604 24.99980279188988 1.12048412491276 0.998874309030446 0.17746927958624714 0.11396401893603955 101.20701412009963 42338.70626642537 0.021820726210348203 0.024742372971496673 1.9875582702868833e-09 8.70168013004604 -0.1216098158823139 CPFPAGAALACCS(ph)EDEEDDEEHEGGGSR ddPTM_A549_PD325901_60min_R1 2 CPFPAGAALACCSEDEEDDEEHEGGGSR 28 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 CPFPAGAALACCS(1)EDEEDDEEHEGGGSR;CPFPAGAALACCS(1)EDEEDDEEHEGGGSR 76.79899999999999 2.1221e-06 14616800.0 2810.6000000000004 3818.5 3118.2 3191.7 3725.7 5042.0 3535.5 3715.3 4106.2 4115.2 4088.5 True False 3095.930042945638 4140.2983960269175 3329.8198032598507 3388.844060123374 3464.0196849672398 5000.939623669771 3670.0453871998343 3641.195426903535 3933.630693695145 3855.3655696955757 3585.64041913688 0.863424571639249 1.1546886781869645 0.9286541353919116 0.9451154226276605 0.966081168228543 1.394713088624089 1.0235397190450213 1.0154937476357508 1.0970510798297035 1.075223703168658 1.0 11.808015101496656 -5.238498209515255 23.27312211120521 1.0516464746720005 0.8634240373993859 0.16888753961369907 0.12413029829169545 3358.480849807089 3406942.492971957 0.01629614647609396 1.0894697957929533 5.774332533182605e-06 5.238498209515255 -0.18822243727261456 CPQDQS(ph)PDRVGTEMEQVSK ddPTM_A549_MK2206_60min_R1 4 CPQDQSPDRVGTEMEQVSK 19 1 Q9H116 Q9H116 GZF1 GDNF-inducible zinc finger protein 1 1 CPQDQS(0.942)PDRVGT(0.058)EMEQVSK;CPQDQS(0.968)PDRVGT(0.032)EMEQVSK;CPQDQS(0.995)PDRVGT(0.005)EMEQVSK;CPQDQS(1)PDRVGTEMEQVSK 83.09 3.466e-05 61959000.0 8032.5 9707.599999999999 9173.8 8011.5 11396.8 9502.800000000001 8601.699999999999 9082.6 14555.0 11492.7 12223.5 True False 9388.189624229815 10201.67537548794 10474.782785396772 9974.317859649898 9720.345817249672 10508.379988551886 10164.51754779175 10370.086364295928 11258.315739558919 8896.4910879732 9188.067598562226 1.0217806435924466 1.1103178406180125 1.1400419808661284 1.0855729730602666 1.0579314652376675 1.1436985934013226 1.1062737010535622 1.1286471560046716 1.2253192108992157 0.968265741684938 1.0 13.165545755630399 -7.260550795456479 24.894018450822447 1.1130526032405976 1.087937086875166 0.0 0.07139815269519491 332.71105509138766 9320970.383396188 0.012521825178702007 0.02082609529933153 5.488443585441817e-08 7.260550795456479 -0.025115516365431523 CPQDQS(ph)PDRVGTEMEQVSK ddPTM_A549_PD325901_60min_R1 2 CPQDQSPDRVGTEMEQVSK 19 1 Q9H116 Q9H116 GZF1 GDNF-inducible zinc finger protein 1 1 CPQDQS(0.991)PDRVGT(0.009)EMEQVSK;CPQDQS(0.988)PDRVGT(0.012)EMEQVSK 93.633 7.907300000000001e-07 29815000.0 9829.1 8946.7 9342.599999999999 8601.900000000001 10660.8 8218.1 8645.9 10806.7 9408.599999999999 10359.7 10515.4 True False 10826.942996199014 9700.669807446378 9976.645017617693 9133.219826667686 9912.022185763408 8151.174518302375 8974.924455718017 10591.151890807852 9013.18926128784 9705.586774002535 9222.072462612683 1.1740249320413232 1.051896940386663 1.0818224491364747 0.9903652203661145 1.0748150403228622 0.883876650432769 0.973200383330685 1.148456806617555 0.9773496464952234 1.0524301140931254 1.0 13.170875286460642 -2.000000000607218 0.5687804981186881 0.9957320272444359 9.86624452567 0.2991193437523776 0.06664896059634204 98.05369786269189 0.767252513196505 0.010691895757591443 1074.5093256916045 0.009999999986018292 2.000000000607218 8.870512498425564 CPS(ph)DEDFR ddPTM_A549_MK2206_60min_R1 2 CPSDEDFR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 CPS(1)DEDFR;CPS(1)DEDFR 59.908 0.011553 8204800.0 1258.58 1007.4100000000001 899.1 814.54 1696.42 1326.6599999999999 1175.46 1597.3600000000001 1816.9299999999998 1463.08 1465.63 True False 1470.997534673284 1058.6828660039873 1026.6058996653767 1014.1023365660897 1446.8788652339852 1467.0462806343648 1389.0258665993094 1823.7906717098365 1405.398256041001 1132.5692118468096 1101.6736216697964 1.3352389543862426 0.9609768675402717 0.9318602891747192 0.9205106817652803 1.3133462005207717 1.3316523621676415 1.2608324636964403 1.6554727605672668 1.2756938428922826 1.0280442315848364 1.0 10.105481163616577 -6.761408541727636 24.999999349047723 1.2095068857543894 1.0241855429327684 0.20497738379492036 0.19735676388879814 1.3323136072481068 1077298.6055943563 0.031919865421187785 0.06322370982255879 1.7321737716052614e-07 6.761408541727636 -0.18532134282162094 CPS(ph)DEDFR ddPTM_A549_PD325901_60min_R1 2 CPSDEDFR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 CPS(1)DEDFR;CPS(1)DEDFR 67.563 0.0079501 6802600.0 1020.48 1558.43 1344.65 1107.26 1451.76 1167.44 1155.53 1297.81 1081.5700000000002 1288.7199999999998 1283.15 True False 1124.0783783623297 1689.76436541056 1435.9060350373172 1175.6529354300856 1349.7933859001103 1157.9327557034987 1199.5043264802778 1271.9241614377513 1036.11537416099 1207.3499992656693 1125.3306845580266 0.9988871660456066 1.501571394611189 1.2759858544168898 1.0447177452482095 1.1994637704473874 1.0289711029769677 1.0659127516383176 1.1302670218552684 0.9207208053408089 1.0728846336753501 1.0 10.13613329221041 -7.184832480076377 0.6346721753311929 0.9678450637004817 1.2750140549334639 0.2587441249960798 0.13328792245286997 0.5605187201395173 0.4220232279829764 0.025223691130542004 0.07966419669545108 6.533825325581694e-08 7.184832480076377 0.30716899123298214 CPS(ph)DEDFRQLPEEDLR ddPTM_A549_MK2206_60min_R1 1 CPSDEDFRQLPEEDLR 16 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 CPS(1)DEDFRQLPEEDLR 48.111999999999995 0.0070019999999999995 1277100.0 159.33 286.05 147.06 193.13 268.64 280.77 145.93 157.4 403.32 242.72 261.07 True False 186.2210087554978 300.6087231816643 167.91531932464721 240.44685866993507 229.123411865256 310.4808950399577 172.443592051484 179.7119320172836 311.96866396969426 187.8893834236389 196.23911383455166 0.9489494989897881 1.5318491676185726 0.8556669261471282 1.2252748902680777 1.1675725974712103 1.5821560186096377 0.8787422073097539 0.9157803890655456 1.5897374273342555 0.9574512427835747 1.0 7.616468813957233 -6.492064071715721 24.53922050095403 1.2410658582852045 1.1351823607672544 0.0 0.28430310254490865 2152.6738850007446 1714277.0355702175 0.04235524380550785 0.09829968050539908 3.220593620196475e-07 6.492064071715721 -0.10588349751795012 CPS(ph)DEDFRQLPEEDLR ddPTM_A549_PD325901_60min_R1 1 CPSDEDFRQLPEEDLR 16 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 CPS(1)DEDFRQLPEEDLR 77.39 0.00011679 1531300.0 261.68 331.64 299.84 204.21 278.78 328.01 276.13 252.89 89.506 239.27 243.28 True False 288.2455609613655 359.5884666906814 320.1889454843928 216.82358790544038 259.1994545387894 325.3387953113689 286.63827825413387 247.84591056163293 85.74437408549939 224.16245136592633 213.35810227898259 1.3509942105899577 1.6853752580742918 1.500711442707343 1.0162425780387117 1.2148563929382237 1.5248485613448264 1.3434609475450416 1.1616428338753915 0.40188009346550074 1.0506395068738295 1.0 7.737133087732348 -8.574900474320032 5.665006922148255 0.7181250069359149 1.3712541543032835 0.5184369264705706 0.23010429335627589 0.10639286367421033 7.502990203189703 0.04559878131885983 0.05194821500381348 2.6613348783135803e-09 8.574900474320032 0.6531291473673686 CPS(ph)DPDSTSQPR ddPTM_A549_MK2206_60min_R1 2 CPSDPDSTSQPR 12 0 A0A1B0GTX1;A0A1C7CYY6;Q6XZF7-2;Q6XZF7 A0A1B0GTX1;Q6XZF7 DNMBP Dynamin-binding protein 1 CPS(0.992)DPDS(0.003)T(0.003)S(0.003)QPR;CPS(1)DPDSTSQPR 83.204 0.00058498 7697900.0 1498.67 1432.0900000000001 1207.63 1055.3500000000001 1687.3600000000001 1125.48 837.22 1312.04 1466.45 1929.28 1771.1399999999999 True False 1751.6088570363524 1504.9772640490457 1378.8900929962183 1313.9107973764615 1439.1515792322753 1244.5775465668403 989.3320368487861 1498.025687953982 1134.3014164394485 1493.4543080568485 1331.3170570227437 1.315696248160087 1.1304424112274671 1.0357338139119643 0.9869255339631806 1.080998377990202 0.9348468420814189 0.7431227832844364 1.1252208330478788 0.8520144847960666 1.1217871056175726 1.0 10.378638478843914 -3.2975634589415357 0.5422832299744819 0.9336065361600395 4.50089477825726 0.4304741543303279 0.11091856449422238 13.623548910254893 0.48716748821022504 0.017174059645991047 48.76963427262436 0.0005040069684188233 3.2975634589415357 3.5672882420972205 CPS(ph)DPDSTSQPR ddPTM_A549_PD325901_60min_R1 2 CPSDPDSTSQPR 12 0 A0A1B0GTX1;A0A1C7CYY6;Q6XZF7-2;Q6XZF7 A0A1B0GTX1;Q6XZF7 DNMBP Dynamin-binding protein 1 CPS(0.997)DPDS(0.001)T(0.001)S(0.001)QPR;CPS(0.987)DPDS(0.004)T(0.004)S(0.005)QPR 86.911 0.00028183 7823500.0 1404.94 1724.22 1164.38 1323.63 1113.35 1469.9299999999998 1380.48 1566.21 1484.69 1293.1399999999999 1533.03 True False 1547.5684745378371 1869.5260705506173 1243.401828785744 1405.3876189181635 1035.152136848989 1457.9593774337382 1433.014921827642 1534.970712882025 1422.2936424485517 1211.4909197113468 1344.4770286778548 1.1510560920923285 1.3905228804013783 0.9248219212852546 1.0453042996950328 0.7699292102200862 1.0844063128899128 1.0658530352406648 1.1416860832434599 1.0578787231844495 0.9010871096122146 1.0 10.39282939063847 -5.764757205332378 24.99999862190508 1.0207499737055767 1.2707894967998965 0.4576081777279698 0.11209927195194297 48.60223910277238 366234.8595354172 0.01383702636736856 0.045750407125259435 1.7188690615978565e-06 5.764757205332378 0.25003952309431976 CPS(ph)PINEHNGLIK ddPTM_A549_MK2206_60min_R1 2 CPSPINEHNGLIK 13 0 A0A087X1M6;G5E9X3;Q9Y2H6-2;Q9Y2H6 A0A087X1M6 FNDC3A Fibronectin type-III domain-containing protein 3A 1 CPS(1)PINEHNGLIK;CPS(1)PINEHNGLIK 144.41 6.2778e-13 59750000.0 3811.5 4035.4 4551.5 3262.7 5044.6 4392.5 4095.8 4087.1 6332.7 4917.3 5533.200000000001 True False 4454.7880177717925 4240.784623412999 5196.971140392574 4062.0616464681707 4302.54602254121 4857.311434494482 4839.953843106061 4666.458941218803 4898.353561243885 3806.47851478683 4159.153731448812 1.0710803940925737 1.019626803247725 1.2495260997679558 0.9766558075873718 1.0344763142579123 1.1678605187797353 1.1636871718661135 1.1219731807300315 1.1777284220599313 0.9152050538562011 1.0 12.022074295806467 CPS(ph)PINEHNGLIK ddPTM_A549_PD325901_60min_R1 2 CPSPINEHNGLIK 13 0 A0A087X1M6;G5E9X3;Q9Y2H6-2;Q9Y2H6 A0A087X1M6 FNDC3A Fibronectin type-III domain-containing protein 3A 1 CPS(1)PINEHNGLIK;CPS(1)PINEHNGLIK 159.04 5.2842e-19 108152000.0 6262.0 6647.3 7334.0 6248.1 6460.3 5922.299999999999 6010.4 6983.4 5848.6 6548.700000000001 6212.299999999999 True False 6897.713630159249 7207.491299701377 7831.729342924692 6634.030946535342 6006.5508148250965 5874.070752332308 6239.129061017075 6844.1106086286845 5602.803681054361 6135.21396439187 5448.226483014319 1.2660475205397443 1.3229059625498016 1.4374823380307902 1.2176496273086206 1.1024781795601633 1.0781619983393906 1.1451669787349181 1.2562089021016745 1.0283720213397811 1.1260937818057564 1.0 12.411570962154892 -6.8834716267740985 0.321839100196305 0.9891233707893513 1.4340456707075595 0.4749805105096482 0.09197540894373704 1.253422680008949 0.19513807673291483 0.04018867482347756 0.1972792934728109 1.3077609744646385e-07 6.8834716267740985 0.4449222999182082 CPS(ph)PTMSLPSSWK ddPTM_A549_MK2206_60min_R1 4 CPSPTMSLPSSWK 13 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 CPS(0.82)PT(0.149)MS(0.029)LPS(0.002)SWK;CPS(0.444)PT(0.444)MS(0.113)LPSSWK;CPS(0.499)PT(0.499)MSLPSS(0.001)WK;CPS(0.494)PT(0.494)MS(0.011)LPSSWK 97.86 0.00016206 16513500.0 7145.8 8043.9 7231.6 6119.0 12048.0 9154.199999999999 8468.9 7884.3 12304.3 10878.0 10499.2 True False 8351.836341963446 8453.300151725183 8257.14962075424 7618.155274692344 10275.755159889091 10122.89136793383 10007.589506782788 9001.923669656087 9517.395695929563 8420.652244900893 7891.958876821251 1.0582716499566236 1.0711282564526021 1.0462737768446257 0.9653060024257007 1.3020538145566205 1.2826842518990875 1.2680742085688208 1.140645029980429 1.2059611364527296 1.0669913992624087 1.0 12.946167723191802 -6.718950438197665 24.99999404711818 1.1419057056851623 1.038595881269088 0.3062748074760734 0.09444316125979957 225.5642661728989 132718.24485291488 0.017144457407485582 0.035688803407316186 1.9100712239673893e-07 6.718950438197665 -0.10330982441607417 CPS(ph)PTMSLPSSWK ddPTM_A549_PD325901_60min_R1 1 CPSPTMSLPSSWK 13 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 CPS(0.829)PT(0.145)MS(0.026)LPSSWK 62.891000000000005 0.0024138000000000002 3974700.0 3561.5 2850.2 3442.8 3409.2 3489.1 2832.9 3196.8 3026.9 4353.1 3453.0 4106.9 True False 3923.0608581622732 3090.396356777771 3676.4491112382207 3619.778541145034 3244.03765274155 2809.829801645003 3318.455973356082 2966.5261049428873 4170.154345313024 3234.9769907073323 3601.777335784091 1.089201383768561 0.8580198242890562 1.0207319244063915 1.0049978673534588 0.9006769020704434 0.7801231280259904 0.9213384570963958 0.8236284001984503 1.157804593827064 0.8981612934723773 1.0 11.814493280317881 -8.765073873782441 24.999998460670025 1.0745188337580955 0.9227347262784036 0.07410518060094196 0.10553331555887499 79.38242431247343 546033.3968273845 0.017056547305127193 0.018504139214326976 1.7176161946413455e-09 8.765073873782441 -0.15178410747969195 CPS(ph)QSSSR ddPTM_A549_MK2206_60min_R1 2 CPSQSSSR 8 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.984)QS(0.016)SSR;CPS(0.925)QS(0.075)SSR 110.38 0.0015989 80822000.0 3485.0 2860.5 1927.32 1502.38 3635.8999999999996 3469.9 3724.2 4381.200000000001 3753.6000000000004 4330.5 3596.4 True False 4073.1827999303932 3006.0872318166453 2200.6429568936414 1870.463167444402 3101.0639264476044 3837.082514866796 4400.838933174373 5002.248516862283 2903.4155932674907 3352.2370423371312 2703.3146244094733 1.506736494210385 1.1120005065904275 0.8140535833391431 0.6919147148301305 1.1471339290094722 1.4193991628721312 1.6279418212875298 1.8504129973236103 1.0740205993972043 1.2400469453567255 1.0 11.400513713908113 -8.974093306104393 24.984494897090322 1.0326557487707664 1.2576767017174426 0.03714353566636874 0.3262771230648345 361.78459854855555 348909.51614504214 0.062354628528002734 0.06489425955251947 1.0614674814579294e-09 8.974093306104393 0.22502095294667623 CPS(ph)QSSSR ddPTM_A549_PD325901_60min_R1 2 CPSQSSSR 8 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.959)QS(0.041)SSR;CPS(0.924)QS(0.076)S(0.001)SR 121.93 0.0011702 55791000.0 4183.4 4198.799999999999 4035.6000000000004 2732.1000000000004 3325.0 1641.65 1838.1599999999999 2594.3 1928.38 3634.1 4544.0 True False 4608.0956883436875 4552.647611689878 4309.480084034205 2900.855611950707 3091.463470627284 1628.2809466873225 1908.1121846797469 2542.5546513110207 1847.3368947220904 3404.6423058006158 3985.116806789282 1.1563263793154224 1.1424125897473614 1.0813936687357115 0.7279223552515793 0.7757522854438001 0.4085905195835882 0.47880960011736007 0.6380125789485953 0.4635590333449844 0.8543394010434687 1.0 11.960406295980956 -6.241835690085499 2.764368673291729 0.6886762359824224 1.1491641119576248 0.5985486607987816 0.16735720761983736 0.2053061952327442 3.1031937902250477 0.03245648027413298 0.09454158807980656 5.730127822384178e-07 6.241835690085499 0.46048787597520235 CPS(ph)QSSSRPAAMISQPPTPPTGQPVR ddPTM_A549_PD325901_60min_R1 1 CPSQSSSRPAAMISQPPTPPTGQPVR 26 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.837)QS(0.091)S(0.033)S(0.033)RPAAMIS(0.005)QPPTPPTGQPVR 47.803000000000004 0.0025208 8385300.0 881.56 1044.8 818.53 1364.4 887.32 900.85 827.54 889.96 795.11 1119.4 1338.0 True False 971.0553222298282 1132.8489627259187 874.0803680207447 1448.675889222774 824.9977042878202 893.5137762758661 859.0324875472631 872.209049639886 761.694291769506 1048.7208929620012 1173.4344822808234 0.8275326291267429 0.9654130501806816 0.7448906447011687 1.234560523913495 0.7030624348828227 0.7614517808775562 0.7320668520645037 0.743295908557723 0.6491153134421178 0.8937191712004113 1.0 10.196521577117736 -4.871549124301154 12.507931606345446 0.8340986221821924 0.5635729751136149 0.0 0.16291984675822305 49330123.17855755 55896483.79988896 0.02420744659200219 370703297.8735502 1.3441597162905897e-05 4.871549124301154 -0.2705256470685775 CPS(ph)QSSSRPAAMISQPPTPPTGQPVREDAK ddPTM_A549_MK2206_60min_R1 1 CPSQSSSRPAAMISQPPTPPTGQPVREDAK 30 2 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.993)QS(0.002)S(0.002)S(0.002)RPAAMISQPPTPPTGQPVREDAK 72.113 4.862e-05 17687000.0 1329.3 1848.3 1703.3 1225.3 2052.3 1697.5 1331.9 1612.7 1995.4 2435.1 2500.1 True False 1553.6533417352873 1942.3705752724006 1944.8535523301491 1525.4985550058072 1750.4093886653716 1877.1283232906949 1573.888989607151 1841.3051636866162 1543.4450859990284 1885.0092187496 1879.2561707502289 0.8267384542443962 1.0335847797147184 1.0349060349519739 0.8117565762185599 0.9314373505377824 0.9988677182532892 0.8375063570917154 0.9798053040057535 0.8213063817600027 1.0030613431467805 1.0 10.875946025757704 -6.231858716516974 24.951923686723838 0.9144508994708902 0.9719272283267429 0.0374740065812309 0.08573037040436883 1515.4862423215343 1278343.7207114922 0.012234642319530054 0.032364742518959363 5.863288763843302e-07 6.231858716516974 0.05747632885585274 CPSPT(ph)MSLPSSWK ddPTM_A549_PD325901_60min_R1 1 CPSPTMSLPSSWK 13 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 CPS(0.154)PT(0.677)MS(0.166)LPS(0.002)SWK 59.426 0.0044358999999999996 4856300.0 3596.0 3015.5 3024.1 2293.2 3010.4 2811.1 3059.1 2965.2 3459.7 3470.7 3797.4 True False 3961.0632727647167 3269.626767898172 3229.3336113905866 2434.8457557649276 2798.9598893162024 2788.2073336172343 3175.5157245037503 2906.0567598456014 3314.300840430836 3251.5594096866307 3330.3438737019433 1.1893856679615724 0.9817685175746493 0.9696697199622585 0.7311094133526824 0.8404417067613306 0.8372130444649607 0.9535098611225126 0.8725996083447344 0.9951827697440523 0.9763434447002803 1.0 11.701455434712685 -8.785743237387893 21.469786129564632 0.9977253228748221 0.9146935370397469 0.06830145115257513 0.10952140785627508 80.8741505392226 71442.40124352089 0.019365015543505396 0.02062578244949186 1.6377845225517078e-09 8.785743237387893 -0.0830317858350752 CPT(ph)PEIQK ddPTM_A549_MK2206_60min_R1 1 CPTPEIQK 8 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 CPT(1)PEIQK 67.726 0.008343799999999998 13042000.0 6924.2 8139.1 6754.7 6464.0 11134.0 8705.2 7737.0 7932.7 12745.0 8835.7 10711.0 True False 8092.835679563286 8553.345425093112 7712.618029662685 8047.680290179991 9496.203349120617 9626.378485955905 9142.71275064984 9057.184517874877 9858.277849582853 6839.709233339839 8051.1630914386305 1.005175971179738 1.06237388659888 0.9579507882363054 0.9995674163820699 1.1794821743480268 1.1956506627213046 1.1355766423825064 1.1249535520533698 1.224453875498542 0.8495305778382485 1.0 12.974981498329305 -6.7456442144867825 24.751977073970817 1.123141147649237 1.0068234453986231 0.1469569497654839 0.10198501960057915 220.78739605089962 345984.899039541 0.01250297063322714 0.02595715469642266 1.7962045224507746e-07 6.7456442144867825 -0.11631770225061389 CPT(ph)PEIQK ddPTM_A549_PD325901_60min_R1 2 CPTPEIQK 8 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 CPT(1)PEIQK;CPT(1)PEIQK 83.869 0.0034652999999999997 35247000.0 15513.0 16884.1 16608.5 13850.8 13633.5 12988.0 13905.8 15311.7 11247.599999999999 14981.400000000001 16463.5 True False 17087.868339932993 18306.9823617541 17735.65268502381 14706.33245855087 12675.929993021686 12882.230034157681 14434.992828545739 15006.296131703717 10774.902486582616 14035.471847258288 14438.593870725217 1.1834856283740536 1.2679200291707202 1.2283504088984387 1.0185432591444035 0.8779199765929148 0.8922080743802122 0.9997505960613811 1.0393183897311176 0.746257051279012 0.9720802436112373 1.0 13.81764262908003 -6.413035443364125 2.7476990212796024 0.900055174487586 1.2343097831191927 0.7028426420888301 0.08160832976035848 0.1288238606654169 1.8729814295439982 0.015207973645938759 0.03940882464542706 3.863354464055337e-07 6.413035443364125 0.3342546086316067 CPT(ph)PEIQKK ddPTM_A549_PD325901_60min_R1 2 CPTPEIQKK 9 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 CPT(1)PEIQKK;CPT(1)PEIQKK 69.45100000000001 0.0024721 63877000.0 10777.5 11978.8 13002.5 10595.5 10499.5 9696.5 11605.2 12263.3 8147.4 10733.0 10811.5 True False 11871.623866023843 12988.295515602262 13884.92784038427 11249.959970873584 9762.051341308628 9617.534918864323 12046.842236609114 12018.698861127265 7804.993111346703 10055.31654829476 9481.75403974524 1.2520493377344364 1.3698199152982076 1.4643838874307415 1.186485108527014 1.029561756230804 1.0143202279398857 1.270528869037484 1.2675607077285238 0.8231592043655681 1.0604911819211176 1.0 13.210938254161517 -7.204932832243605 0.47335261476099 0.9242974785530567 1.394792409702428 0.3412553709722682 0.14617393742662982 0.7814992850748983 0.3112821708079156 0.04305354375605378 0.15349496801467225 6.238313094444816e-08 7.204932832243605 0.47049493114937135 CPT(ph)PVGDGSSSR ddPTM_A549_MK2206_60min_R1 2 CPTPVGDGSSSR 12 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 CPT(0.802)PVGDGS(0.066)S(0.066)S(0.066)R;CPT(0.412)PVGDGS(0.196)S(0.196)S(0.196)R 47.99100000000001 0.036305000000000004 4727800.0 1253.31 1488.69 1158.69 1252.1599999999999 1882.48 1102.48 1035.65 1299.56 1319.59 1766.92 1871.71 True False 1464.8380875124142 1564.4579622908996 1323.009665090953 1558.939256211598 1605.5696857061766 1219.1437018330053 1223.8141993292631 1483.7766097355857 1020.7049719522184 1367.771544820765 1406.9127504319483 1.0411719469190124 1.1119793759851717 0.9403636897062483 1.108056811435517 1.1412006076519223 0.8665382423030181 0.869857920438584 1.0546329964527215 0.7254927298361914 0.9721793653521399 1.0 10.458317147407026 -7.273356910611241 24.39989335471794 0.8824259851164092 1.0660398427647833 0.36203785864530025 0.09653587252672545 448.27495281709713 917794.6482621913 0.01742413428633035 0.02799694534921588 5.3289677182896776e-08 7.273356910611241 0.183613857648374 CPT(ph)PVGDGSSSR ddPTM_A549_PD325901_60min_R1 2 CPTPVGDGSSSR 12 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 CPT(0.88)PVGDGS(0.053)S(0.053)S(0.014)R;CPT(0.998)PVGDGS(0.001)SSR 76.357 0.0012331 7077200.0 1954.83 2061.43 1950.7 2596.1 2099.4300000000003 1903.5099999999998 1887.4699999999998 1817.62 1457.02 2214.48 1946.65 True False 2153.282902530215 2235.1539406892125 2083.086232512024 2756.455200829116 1951.9732794403124 1888.0084456667291 1959.2987037132154 1781.3661432046943 1395.786516323535 2074.65735487448 1707.224390831066 1.261277026086776 1.3092326660124354 1.2201596015729312 1.6145828372843778 1.143360702859982 1.1058935520172943 1.1476515414353008 1.0434282410512752 0.8175764848603614 1.2152224195113273 1.0 10.73743697762852 -7.758148167281878 1.0403400786941286 0.9177744299382101 1.327096138487177 0.3769233958029088 0.15134301503255573 0.22228227399323386 0.48545410500200237 0.023459232071839586 0.03977410100580398 1.745226636253204e-08 7.758148167281878 0.40932170854896677 CQAS(ph)FRY(ph)KGNLAS(ph)HK ddPTM_A549_PD325901_60min_R1 1 CQASFRYKGNLASHK 15 2 P41182 P41182 BCL6 B-cell lymphoma 6 protein 3 CQAS(1)FRY(1)KGNLAS(1)HK 48.315 0.008691899999999999 56291000.0 4619.7 3347.1 4077.9 6142.3 12129.0 11319.0 6353.9 6185.0 16350.0 4394.3 4018.6 True False 5088.688543156608 3629.1718636484693 4354.650816404772 6521.695920824577 11277.10088277844 11226.821816802487 6595.701141487494 6061.635322961364 15662.866358656564 4116.843148064073 3524.337676004273 1.4438708804219695 1.0297457841108608 1.2355940936232503 1.8504741941239202 3.1997787724937536 3.1855125271455047 1.8714725284114624 1.7199360220879172 4.444201378686953 1.1681182470379952 1.0 11.783136443925477 -6.520363175503899 4.281468331307535 2.609936043736205 1.2443671206331566 0.18470634795922092 0.961043870604518 0.268866336035859 11.893020383279648 0.1799040178343726 0.4083198103597995 3.0174273640553235e-07 6.520363175503899 -1.3655689231030486 CQEHSKES(ph)PAR ddPTM_A549_MK2206_60min_R1 2 CQEHSKESPAR 11 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 CQEHS(0.124)KES(0.876)PAR;CQEHS(0.237)KES(0.763)PAR 73.887 0.00061454 14853800.0 944.6300000000001 964.21 781.6 298.0 1116.96 1077.01 824.79 728.0699999999999 1281.13 949.81 1043.63 True False 1104.060450013845 1013.284170526106 892.4426328311184 371.01001337772846 952.6566636279648 1190.9784833386218 974.643666745312 831.2761521208622 990.9561005442192 735.2472613283064 784.4678682772936 1.40740047446224 1.2916834602178127 1.1376407739821637 0.47294481824025947 1.2143985778793172 1.5181991914519497 1.2424264984691444 1.0596688350618624 1.2632207648228826 0.9372560573359409 1.0 9.615570545538697 -10.995421566275835 1.2557404477075815 0.9994340721979017 1.1791207490875413 0.08818894028930535 0.25441814714676253 1.228119308784629 3.4286554446808872 0.18932146066285857 0.04267148450515076 1.0105979983741223e-11 10.995421566275835 0.17968667688963957 CQEHSKES(ph)PAR ddPTM_A549_PD325901_60min_R1 2 CQEHSKESPAR 11 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 CQEHS(0.037)KES(0.963)PAR;CQEHS(0.067)KES(0.933)PAR 92.939 0.00012307 23570000.0 2623.32 2743.0299999999997 3041.4 2137.79 2313.45 2237.9900000000002 1910.3 2306.31 1428.6399999999999 2290.83 2056.5299999999997 True False 2889.637515213886 2974.194764764621 3247.8076934239366 2269.836433026647 2150.961252969229 2219.76455144322 1982.9975118562713 2260.3088377848067 1368.5992290294262 2146.186602844505 1803.5898474177734 1.6021588940251708 1.6490416427120724 1.8007462717057714 1.2585103183389537 1.1926000005205133 1.2307479744473446 1.099472540664031 1.2532277452220772 0.7588195459122096 1.1899526967936933 1.0 10.816655578702667 -6.884571169513109 0.5767327147161575 0.8986416594077935 1.7644776347879996 0.6527020588790922 0.16977618716312207 0.36878747725084865 0.20459556102711873 0.03419894665666517 0.15295590914100213 1.304454185181147e-07 6.884571169513109 0.8658359753802061 CQENGQELS(ph)PIALEPGPEPHR ddPTM_A549_MK2206_60min_R1 1 CQENGQELSPIALEPGPEPHR 21 0 A0A0A0MR08;O94966-2;O94966-7;O94966-6;O94966-5;H0YB23 A0A0A0MR08 USP19 Ubiquitin carboxyl-terminal hydrolase 19 1 CQENGQELS(1)PIALEPGPEPHR 84.948 1.4475e-05 3293000.0 730.53 742.58 635.83 812.0 1090.6 900.1 497.75 715.33 1297.5 1147.2 1110.2 True False 853.8256042562845 780.3741501843747 726.0002549040559 1010.9400364520653 930.1741847090841 995.3479845619757 588.1847320196403 816.7302181062483 1003.6183216817377 888.0467232349972 834.5067000387601 1.023150088808906 0.9351322765271134 0.8699753457585607 1.211422312613081 1.1146395645066487 1.1927381583823655 0.7048292506127525 0.9786982154466991 1.202648608615273 1.0641576912369313 1.0 9.704779822434965 -6.243119710285921 24.50112130725974 1.075813624451016 0.9419905498974189 0.11162371040383601 0.13961639886951935 1022.9945619684989 1368172.4050903195 0.020779837462530457 0.05485230836725229 5.713211342257633e-07 6.243119710285921 -0.133823074553597 CQS(ph)LTEDLEFRK ddPTM_A549_PD325901_60min_R1 2 CQSLTEDLEFRK 12 1 P20700;E9PBF6;A0A0D9SFE5 P20700 LMNB1 Lamin-B1 1 CQS(0.794)LT(0.206)EDLEFRK;CQS(0.89)LT(0.11)EDLEFRK 70.529 0.0012588 4813900.0 1693.98 2290.3199999999997 2432.3999999999996 2034.46 2270.1400000000003 1980.3400000000001 2002.76 2495.8999999999996 1581.72 2205.1000000000004 2377.1000000000004 True False 1865.9516025578348 2483.3333042787385 2597.4772912094363 2160.123973606103 2110.6931979578408 1964.2127676196335 2078.9761277523244 2446.117316504329 1515.245808979466 2065.8696096752788 2084.7317696784357 0.8950559634084978 1.1912003934500341 1.2459527546846423 1.0361639828318518 1.0124531264199084 0.9421896841542392 0.9972391450977892 1.1733487022561355 0.7268301040057487 0.9909522365047152 1.0 11.025646057085718 -7.712584264432269 0.7963584860449839 0.8856989603831245 1.1024285148757156 0.05879642094188553 0.13518015126393584 0.6308969523138918 0.8062838578432204 0.03014702372335944 0.05679338519525289 1.9382765233752066e-08 7.712584264432269 0.21672955449259113 CQSLT(ph)EDLEFRK ddPTM_A549_MK2206_60min_R1 1 CQSLTEDLEFRK 12 1 P20700;E9PBF6;A0A0D9SFE5 P20700 LMNB1 Lamin-B1 1 CQS(0.407)LT(0.593)EDLEFRK 55.724 0.011035 2573400.0 689.54 713.25 558.04 543.15 632.26 716.51 507.66 660.76 1008.8 827.56 804.01 True False 805.9174943655684 749.5513784629335 637.1784631845924 676.2217743829298 539.2553915497575 792.3306126191554 599.895250742523 754.4247534926322 780.308410722572 640.6136212346186 604.3521274528589 1.3335230534593132 1.2402560434792222 1.0543165718139944 1.1189201521188934 0.892286743198105 1.3110413228105322 0.9926253644061449 1.2483198440489969 1.291148612335179 1.0600006058298987 1.0 9.239245574596254 -5.551077338687079 4.84956335953399 1.1277090444605378 1.3154032469032095 0.2312021932720194 0.12629046910011962 0.21935123391713876 12.790130942030002 0.01902759743475162 0.0867660439433114 2.811400134752708e-06 5.551077338687079 0.18769420244267176 CQSVSS(ph)AGELETENYER ddPTM_A549_MK2206_60min_R1 2 CQSVSSAGELETENYER 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 CQSVS(0.002)S(0.998)AGELETENYER;CQSVS(0.019)S(0.981)AGELETENYER 221.31 1.9999999999999996e-63 7971900.0 1255.04 1667.46 1647.47 2208.21 2357.8 2263.3 2179.2 2189.2 2744.4 2645.0 1919.6799999999998 True False 1466.8600692179755 1752.326591702493 1881.1060188207314 2749.2215491303155 2010.9707433587737 2502.8009037430525 2575.1324319783025 2499.52580414382 2122.7977819062507 2047.4926629677193 1442.9704755272987 1.0165558437236542 1.214388389382775 1.30363444763714 1.905251421118425 1.393632633144426 1.7344782489942938 1.78460507380602 1.7322085562633767 1.4711304339962503 1.4189428666026673 1.0 10.494826065956124 -10.31431292703788 0.9013957625676967 1.025252220599709 1.5161502864629544 0.08341569205787647 0.2815937203816459 0.48360550050724266 0.7586363771998729 0.1359861530911927 0.051523175301057884 4.8493895578224236e-11 10.31431292703788 0.49089806586324536 CQSVSS(ph)AGELETENYER ddPTM_A549_PD325901_60min_R1 2 CQSVSSAGELETENYER 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 CQSVS(0.149)S(0.851)AGELETENYER;CQSVS(0.022)S(0.978)AGELETENYER 143.14 3.1264e-16 10312200.0 1753.04 1709.9099999999999 1893.9099999999999 1416.34 1925.4299999999998 1352.33 1635.35 1954.04 1495.72 1821.06 1196.95 True False 1931.0073302801602 1854.010116629666 2022.4421216060123 1503.8241050584768 1790.1944391728994 1341.3170728435823 1697.5841391478568 1915.0651392852756 1432.8600899064102 1706.0779608159564 1049.7327380912047 1.839522823486893 1.7661734738319486 1.9266257478865967 1.4325780748659653 1.705381164379157 1.2777700686772746 1.6171584228521645 1.8243359188430754 1.3649760914495914 1.6252498363709469 1.0 10.03580634921037 -11.437007598865653 0.11633776070195735 7.755593707748156e-14 2.137872397146295 0.06738719324230269 0.25990092433887124 12.261711631259653 0.2663933723814324 4.5624929455865475 1.1235513043062315 3.655883948443041e-12 11.437007598865653 2.1378723971462175 CQT(ph)PIK ddPTM_A549_MK2206_60min_R1 2 CQTPIK 6 0 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 CQT(1)PIK;CQT(1)PIK 89.698 0.040146 89602000.0 13300.099999999999 17387.3 16514.300000000003 15896.2 22087.4 20118.2 19288.8 19197.6 26698.0 27840.0 26000.0 True False 15544.831723774529 18272.239302837108 18856.27606366805 19790.769713607533 18838.37271900185 22247.094570619643 22793.325281728663 21918.918590184254 20650.94562794531 21550.924664280272 19543.482436504935 0.7953972263785806 0.9349530904843605 0.9648370562887367 1.0126531838891053 0.9639209787818561 1.1383382998858318 1.166287807497061 1.1215462065881505 1.056666625052031 1.102716710509365 1.0 14.254399942363925 -5.082570372986258 0.8043640141627774 1.0494784393766563 0.5949589406179709 0.6626396128606871 0.06018242907877412 1.7377443365726952 0.6667101930413613 0.01060125779027054 0.751414321978011 8.268555142188701e-06 5.082570372986258 -0.45451949875868536 CQT(ph)PIK ddPTM_A549_PD325901_60min_R1 2 CQTPIK 6 0 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 CQT(1)PIK;CQT(1)PIK 85.676 0.042155 134569000.0 24287.0 28512.0 33086.0 21910.0 27467.0 23227.0 27820.0 31342.0 20867.1 29001.0 27495.0 True False 26752.59836085558 30914.806302872712 35331.41492228065 23263.330938779687 25537.812676005888 23037.8470128873 28878.70532368812 30716.859222676645 19990.128354294957 27169.871910658385 24113.289305165352 1.1094545427746707 1.2820650850089703 1.4652258543056689 0.9647514548666907 1.0590762775170364 0.9554004317425214 1.1976261288210879 1.2738560398765975 0.8290087719394149 1.1267592557286772 1.0 14.557540842624679 -7.1566910296129915 0.4613889207440317 0.9308574148273653 1.2838170357191343 0.041437149634486414 0.16931885963758037 1.2030939920938521 0.4455134319358865 0.04691690823619367 0.17666415534327057 6.971222918695906e-08 7.1566910296129915 0.352959620891769 CQTAEADS(ph)ES(ph)DHEVPEPESEMK ddPTM_A549_MK2206_60min_R1 3 CQTAEADSESDHEVPEPESEMK 22 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 2 CQT(0.003)AEADS(0.997)ES(0.996)DHEVPEPES(0.004)EMK;CQT(0.021)AEADS(0.983)ES(0.992)DHEVPEPES(0.004)EMK;CQT(0.08)AEADS(0.959)ES(0.959)DHEVPEPES(0.001)EMK 59.263000000000005 0.0005377000000000001 19981300.0 1769.6 2754.02 1701.06 1804.4499999999998 2624.74 1770.75 1991.0 2044.98 3434.8599999999997 2664.45 3983.9400000000005 True False 2068.265217433809 2894.187854629496 1942.2958866475208 2246.5403310048378 2238.644222972054 1958.1295896712807 2352.738928078561 2334.862177488592 2656.869694344303 2062.548894459107 2994.6177468495944 0.6906608429772617 0.9664632014133514 0.6485955974484089 0.750192685984129 0.7475559193914344 0.6538829844748223 0.7856558422368584 0.7796862153591789 0.8872149699705045 0.6887519773196279 1.0 11.548156144130262 -9.084891228889024 0.9331252476113922 0.9733697795660804 0.7474287915654824 0.0 0.11863514414882606 0.24337865790264224 0.4428013595023616 0.020262814966411115 0.01793400128440581 8.224486103058939e-10 9.084891228889024 -0.22594098800059803 CQTAEADS(ph)ES(ph)DHEVPEPESEMK ddPTM_A549_PD325901_60min_R1 2 CQTAEADSESDHEVPEPESEMK 22 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 2 CQT(0.018)AEADS(0.967)ES(0.853)DHEVPEPES(0.162)EMK;CQT(0.019)AEADS(0.985)ES(0.987)DHEVPEPES(0.009)EMK 48.18 0.0032141999999999995 41134000.0 1306.1 1156.0500000000002 1146.97 1035.98 1196.33 839.0999999999999 1135.44 1408.33 1122.45 1115.53 771.8299999999999 True False 1438.6943104999991 1253.4743906578283 1224.8102814909091 1099.970131718712 1112.3039079144476 832.2666478027178 1178.6497905366082 1380.2397533364872 1075.277329925019 1045.0952454224596 676.8998030334888 2.1254169436193817 1.8517871995832362 1.8094410369185958 1.6250117473653518 1.643232725035108 1.2295270940735412 1.7412470579169248 2.0390606514450433 1.5885324904900602 1.5439437871586363 1.0 9.402798486847038 -12.23874427201032 0.2075594555832346 1.3534362468110267e-15 1.8875739320206841 0.21678656299580767 0.2755839629505535 7.910878936483097 0.2597873576369783 3.9728264463477747 0.23105872351941184 5.771061839461833e-13 12.23874427201032 1.8875739320206828 CQTAEADS(ph)ESDHEVPEPESEMK ddPTM_A549_MK2206_60min_R1 2 CQTAEADSESDHEVPEPESEMK 22 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 CQT(0.034)AEADS(0.524)ES(0.442)DHEVPEPESEMK;CQT(0.088)AEADS(0.486)ES(0.426)DHEVPEPESEMK 53.55 0.0021949 5480000.0 1190.0500000000002 1043.24 1091.83 1218.64 1766.96 1357.46 1047.41 1176.58 1671.14 1394.54 1609.86 True False 1390.901346070924 1096.336459961683 1246.6679117246667 1517.2068547068288 1507.0425246777575 1501.105516190979 1237.7108391053566 1343.3638181251297 1292.629458262211 1079.5124454499073 1210.0873321243014 1.149422284777748 0.905997799379546 1.0302297021291418 1.2537994692030872 1.2453998027003166 1.2404935382273583 1.0228276970163486 1.1101379069615267 1.0682117099705584 0.8920946586184233 1.0 10.2408954553653 -9.291258949626839 0.8205478457565675 1.0134056437413057 1.1224087434204042 0.23664271257624214 0.10758315725198271 0.7739620535189685 1.1180863754685633 0.032826493942749266 0.02493645143439446 5.113768343671444e-10 9.291258949626839 0.10900309967909849 CQTAEADSES(ph)DHEVPEPESEMK ddPTM_A549_MK2206_60min_R1 1 CQTAEADSESDHEVPEPESEMK 22 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 CQTAEADS(0.078)ES(0.921)DHEVPEPESEMK 93.176 3.1308000000000005e-07 4189400.0 397.24 699.25 452.24 475.45 587.81 619.84 424.32 442.04 795.49 593.14 588.27 True False 464.284400414448 734.8388382617684 516.3744322819151 591.9352713437619 501.3439276671986 685.4310573835079 501.4134515129558 504.70052369072454 615.3127851364976 459.14926204637936 442.1863235739524 1.0499745823477507 1.6618307692613927 1.1677756745354322 1.3386557651975075 1.1337843369173144 1.5500955611732632 1.1339415644072903 1.141375245646459 1.3915237815662362 1.0383615176863108 1.0 8.788510594356357 -10.917012358959111 1.0100656873150418 0.9885018185509931 1.297729123822512 0.238830041539439 0.18197099828709773 0.598856576581928 1.0157223973192082 0.14064785282187367 0.028569295957888652 1.2105636833776832e-11 10.917012358959111 0.30922730527151887 CQTAEADSES(ph)DHEVPEPESEMK ddPTM_A549_PD325901_60min_R1 2 CQTAEADSESDHEVPEPESEMK 22 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 CQTAEADS(0.18)ES(0.82)DHEVPEPESEMK;CQTAEADS(0.067)ES(0.933)DHEVPEPESEMK 81.34100000000001 2.2292e-05 7585300.0 910.42 927.0699999999999 1274.01 1039.92 1121.13 1062.08 1159.6 1400.87 982.27 1395.04 1341.26 True False 1002.8451681842198 1005.1974424524477 1360.4719798444894 1104.1534965703222 1042.3856964885322 1053.4307726115019 1203.7292125574672 1372.9285488887451 940.9886078359382 1306.9569363209848 1176.2935229476666 0.8525467059201315 0.8545464400190946 1.156575253798296 0.9386717473402649 0.8861612141469796 0.895550942057146 1.0233238465353867 1.167164931290561 0.7999607151435474 1.1110806196109027 1.0 10.200032388427058 CRS(ph)PGMLEPLGSSR ddPTM_A549_MK2206_60min_R1 7 CRSPGMLEPLGSSR 14 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR 125.28 1.7694000000000002e-07 382222800.0 12001.800000000001 14553.6 11434.99 11315.77 16224.1 12034.87 11268.08 13050.44 17536.8 16232.099999999999 17599.6 True False 14027.41042416202 15294.316076548395 13056.643528655972 14088.134157984223 13837.55638193531 13308.391955299843 13315.34427960998 14900.379835296297 13564.742800515063 12565.257336316952 13229.133595750462 1.0603423363014481 1.1561086722611467 0.9869613481604043 1.0649324882855287 1.0459911287297219 1.005991198061137 1.006516729401479 1.1263307402143616 1.025368948188142 0.9498171021837164 1.0 13.691430959076508 -2.0000000000051106 0.09886592962119396 0.9742455883123198 1.2896006698473519 0.24947528470671354 0.05026542840764714 128.22347782027498 0.871942911799483 0.3133414072652155 5.506347665853896 0.009999999999882325 2.0000000000051106 0.3153550815350321 CRS(ph)PGMLEPLGSSR ddPTM_A549_PD325901_60min_R1 5 CRSPGMLEPLGSSR 14 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR 122.1 4.7775e-07 538028500.0 10527.539999999999 11489.87 13564.63 12393.57 11810.060000000001 11108.58 11503.17 13033.31 10222.71 13350.48 14182.59 True False 11596.288110834657 12458.16166860227 14485.207362546562 13159.092671060316 10980.562128095175 11018.115407517958 11940.929429126152 12773.350407616093 9793.085049131625 12507.528414392827 12438.221340845435 0.9323108017666495 1.0016031494544444 1.1645722459512038 1.0579561426397548 0.882808066136956 0.8858272501821429 0.960019049501375 1.0269434879463142 0.7873380590979242 1.0055721048571307 1.0 13.60249257513004 -6.757715425909662 24.990842756735088 0.9098397748588231 1.0453930514816632 0.22232492760958034 0.08469487633369306 93.3549494819886 626479.5918979276 0.01400334377264456 0.028284408508017937 1.7469664883382695e-07 6.757715425909662 0.1355532766228401 CRS(ph)VELDLNQAHMEETPK ddPTM_A549_PD325901_60min_R1 2 CRSVELDLNQAHMEETPK 18 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 CRS(1)VELDLNQAHMEETPK;CRS(1)VELDLNQAHMEETPK 154.71 6.913600000000001e-23 13630300.0 3393.0 3328.8 3514.1000000000004 3014.6 3783.1000000000004 3146.1000000000004 3244.6 3302.3 2288.2200000000003 3222.0 3432.1 True False 3737.454862205415 3609.3296584246173 3752.587957999952 3200.804995346655 3517.388106986491 3120.479204686131 3368.0750285132476 3236.4330358957645 2192.054070899397 3018.5623701300397 3009.973457874449 1.2416903054170751 1.1991234171790388 1.246717956327068 1.0633997409422224 1.1685777819018917 1.036713196431213 1.1189716705647228 1.0752364036396633 0.728263588226907 1.0028534843831 1.0 11.555535049932201 -8.592699754281986 6.1367322383444645 0.8719922766779906 1.1479912468305742 0.5533131485089322 0.09359793434228632 0.11202436164387825 7.517887796994588 0.019260480391020893 0.02187353067032249 2.5544667007114328e-09 8.592699754281986 0.27599897015258357 CS(ph)DEERPSTSR ddPTM_A549_MK2206_60min_R1 2 CSDEERPSTSR 11 1 Q6PIJ6;Q6PIJ6-2 Q6PIJ6 FBXO38 F-box only protein 38 1 CS(1)DEERPSTSR;CS(0.999)DEERPSTSR 59.871 0.0024139 6385100.0 305.73 456.5 182.56 248.66500000000002 599.02 375.57 480.8 481.91999999999996 457.04 544.74 561.46 True False 357.32974961914493 479.73390013085043 208.44975313414668 309.5879361629962 510.9049515169954 415.31256811681055 568.155136423994 550.233635818102 353.52116974290647 421.6828556616394 422.03398649230974 0.8466847719754821 1.1367186423020272 0.4939169825317967 0.7335616231671367 1.2105777446108716 0.9840737509522313 1.346230764839947 1.3037661738840276 0.8376604279696993 0.9991680034264806 1.0 8.721215373943144 -6.733023943666611 24.989756447562154 1.0047289859832993 0.804520085031196 0.24702235812371753 0.21115602922220078 333.7206155742707 293486.6872312996 0.03287101338768761 0.06841632247120587 1.8491666673011124e-07 6.733023943666611 -0.2002089009521033 CS(ph)DEERPSTSR ddPTM_A549_PD325901_60min_R1 1 CSDEERPSTSR 11 1 Q6PIJ6;Q6PIJ6-2 Q6PIJ6 FBXO38 F-box only protein 38 1 CS(1)DEERPSTSR 59.871 0.0024139 1895200.0 425.19 314.13 369.8 174.29 454.56 254.62 200.48 323.31 382.87 339.19 232.8 True False 468.35497579166537 340.602837539331 394.8968517880489 185.05549745869055 422.63327374686844 252.54645913899196 208.10937610686543 316.86132841821154 366.77930536629026 317.7734855134723 204.16707584078898 2.293978957493088 1.668255452729977 1.9341847854841807 0.9063924567494821 2.0700363758769855 1.2369597698305166 1.0193091870951352 1.5519707431442198 1.796466466769145 1.5564384424121078 1.0 7.673606424497196 -2.000000000000764 0.04133041167815516 2.61969618422804e-11 4.263989733496684 0.18529956673970205 0.39836233275361327 665.684455773479 2.0355548975900644 55.71517597137405 193.817811574659 0.009999999999982412 2.000000000000764 4.2639897334704875 CS(ph)DNTEVEVSNLENK ddPTM_A549_MK2206_60min_R1 2 CSDNTEVEVSNLENK 15 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 CS(0.979)DNT(0.021)EVEVSNLENK;CS(0.996)DNT(0.004)EVEVSNLENK 61.641000000000005 0.0051481 6618400.0 2484.1 2674.8 2643.4 2467.8999999999996 3605.3 2952.1 2841.3 2874.3999999999996 4340.0 4031.8 4416.0 True False 2903.355349585966 2810.935895005473 3018.273868507906 3072.535610788241 3074.965145912031 3264.489262554616 3357.527431617084 3281.855002480811 3356.9969295558712 3121.0135797932885 3319.38532460022 0.8746665619290945 0.8468242219947805 0.9092869833879322 0.9256339081869897 0.926365831385476 0.9834619796506404 1.0114907138783165 0.9886935928042855 1.011330894511375 0.9402384100041706 1.0 11.696700396338914 -6.719499739145248 0.7800270876944075 1.0060266725672418 0.8568961698348491 0.7874694411678652 0.024784044598089392 0.12639030655712413 0.13501292648183408 0.002515874821243623 0.01065256951996148 1.907656869805249e-07 6.719499739145248 -0.1491305027323927 CS(ph)DNTEVEVSNLENKQPVESTSAK ddPTM_A549_MK2206_60min_R1 1 CSDNTEVEVSNLENKQPVESTSAK 24 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 CS(0.945)DNT(0.052)EVEVS(0.002)NLENKQPVESTSAK 81.53399999999999 4.092e-06 5971700.0 1255.2 1809.6 1567.3 1126.7 2137.7 1702.7 1515.9 1209.7 2383.9 2546.3 2055.5 True False 1467.04707330635 1901.7009105734653 1789.5667073134737 1402.7415505794854 1823.2471617940664 1882.8785838392146 1791.3194078725724 1381.1786795508774 1843.9504563060466 1971.0890615178462 1545.0626210859964 0.9495065463917504 1.2308244886778728 1.1582486579447633 0.9078865357531748 1.1800474213223404 1.218642246691447 1.1593830459852084 0.8939305505818735 1.1934470688378749 1.2757340929860845 1.0 10.593449596124684 -11.131646498609921 1.487899348292326 0.9998865666375502 1.1135567257921686 0.0 0.1446801269122729 0.7581529686129707 3.0005281403711623 0.08469935620243288 0.018127432787447068 7.385051043573011e-12 11.131646498609921 0.11367015915461842 CS(ph)DNTEVEVSNLENKQPVESTSAK ddPTM_A549_PD325901_60min_R1 2 CSDNTEVEVSNLENKQPVESTSAK 24 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 CS(0.986)DNT(0.013)EVEVS(0.001)NLENKQPVESTSAK;CS(0.949)DNT(0.05)EVEVS(0.001)NLENKQPVESTSAK 100.1 1.0829e-09 20758900.0 5473.2 5622.9 6614.0 5756.5 5549.5 6473.1 6660.200000000001 6896.6 5553.1 6738.7 5766.4 True False 6028.835234843113 6096.761516569267 7062.865813212968 6112.065931039947 5159.722264735672 6420.385219749469 6913.6575556012795 6759.041902721967 5319.722518425431 6313.217331966265 5057.16935622133 1.1921363138504426 1.2055679940931838 1.3966045658574255 1.2085942748824265 1.0202787174584496 1.269561046408523 1.3671002627381061 1.336526706270375 1.0519170199196726 1.2483697672097425 1.0 12.30411437740245 -8.856244909048334 6.26151967655778 1.0229179489723428 1.2482395820764287 0.16859948667382263 0.11854809598294726 0.12671271660944355 7.014773510168036 0.017852745325141032 0.01894943408939447 1.3923713899718693e-09 8.856244909048334 0.22532163310408593 CS(ph)HSLN ddPTM_A549_MK2206_60min_R1 1 CSHSLN 6 0 B4DP61;Q16637-2;Q16637;A0A0G2JRX5;A0A0G2JRY6;U3KPX7 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 CS(0.984)HS(0.016)LN 76.035 0.045443 6136200.0 1361.1 773.5 865.13 830.75 1233.3 1123.5 1195.7 1223.0 1439.6 1679.6 1911.6 True False 1590.8204042999314 812.8678461143763 987.8184428623154 1034.283787293785 1051.8832037426307 1242.3880242810585 1412.9432126085073 1396.3639952804185 1113.5328985688093 1300.1771934671392 1436.8969625239545 1.107122115078875 0.565710602301329 0.6874664423586653 0.71980372585452 0.7320519363441098 0.8646326470749615 0.9833295284629375 0.9717913195582664 0.7749566792965126 0.9048506798868426 1.0 10.488740896919849 -7.359726973293534 4.261642331586791 0.904817922755325 0.7450275631669926 0.2377168085337621 0.13629004115636748 0.27499131061332754 8.722942733475753 0.021230137907558812 0.03457021033722759 4.367903417152963e-08 7.359726973293534 -0.15979035958833243 CS(ph)HSLN ddPTM_A549_PD325901_60min_R1 2 CSHSLN 6 0 B4DP61;Q16637-2;Q16637;A0A0G2JRX5;A0A0G2JRY6;U3KPX7 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 CS(0.822)HS(0.178)LN;CS(0.8)HS(0.2)LN 88.029 0.038596 13640600.0 3242.1 2987.7 2709.8999999999996 2802.3999999999996 3028.3 2788.5 2399.7 2722.3 2667.3 3135.2 3101.8 True False 3571.2356052921236 3239.4839643340606 2893.810109952496 2975.497883287823 2815.602655067853 2765.7913805242283 2491.021896666225 2668.001590896964 2555.2026567856083 2937.242936943421 2720.298263930239 1.3128103093123566 1.1908561672401727 1.0637841255581917 1.0938131023135955 1.0350345373525034 1.0167235766743687 0.9157164601014157 0.980775390064133 0.9393097406509743 1.0797503258704226 1.0 11.409549127425233 -4.470715246539986 0.5095073256923772 0.9680575253662171 1.9473237596601198 0.815876352010991 0.046692674944792116 1.6981305324868352 0.16445459831618883 0.006790633889861258 1.1919348183944425 3.382865675467302e-05 4.470715246539986 0.9792662342939027 CS(ph)LPAEEDSVLEK ddPTM_A549_MK2206_60min_R1 2 CSLPAEEDSVLEK 13 0 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 CS(1)LPAEEDSVLEK;CS(1)LPAEEDSVLEK 170.79 1.1195e-21 5857000.0 2525.41 3490.0 2911.3999999999996 3113.2 4278.0 3891.6 3656.4 3831.4 4958.5 4169.8 4828.3 True False 2951.637467653434 3667.6260930047497 3324.2802983937036 3875.9341397568564 3648.711867032334 4303.406528964989 4320.720550791791 4374.512683170397 3835.407667097417 3227.839283948128 3629.2998556991074 0.8132801325353328 1.010560228922793 0.9159563636423069 1.0679564361898777 1.005348693165362 1.1857401427460805 1.1905107658731868 1.2053323938778657 1.0567899648949253 0.8893834657611539 1.0 11.825475543038634 -6.262161969033664 24.74644577502423 1.063818156143707 0.9229950336166662 0.33947772547620314 0.09939921882636575 53.04051100620405 1816526.4340397955 0.013333873551102516 0.032751822316802785 5.468119927052036e-07 6.262161969033664 -0.14082312252704077 CS(ph)LPAEEDSVLEK ddPTM_A549_PD325901_60min_R1 2 CSLPAEEDSVLEK 13 0 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 CS(1)LPAEEDSVLEK;CS(1)LPAEEDSVLEK 157.2 2.0945e-18 9532600.0 5506.200000000001 5281.799999999999 5780.6 6025.4 6769.5 5584.799999999999 6617.700000000001 6944.6 5152.0 7154.4 6425.4 True False 6065.185370549802 5726.915822478713 6172.906277571645 6397.575273323735 6294.033673507187 5539.3192404345355 6869.54019484439 6806.084505066692 4935.479356562611 6702.669963022461 5635.1165339665195 1.0763194219659837 1.016290574996783 1.0954354254013232 1.1353048751984773 1.1169305258496331 0.9829999445522464 1.2190591185536614 1.2077983594557424 0.8758433524512335 1.1894465576037516 1.0 12.46022973023921 -8.769805245578329 24.99862136965158 0.9413704706462364 1.1038811762528833 0.0 0.10340163106119415 116.90340696091697 349326.07399915764 0.013793085027274677 0.014801151640467695 1.6990053812970436e-09 8.769805245578329 0.16251070560664693 CS(ph)PLEPDFVPDEK ddPTM_A549_MK2206_60min_R1 1 CSPLEPDFVPDEK 13 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 CS(1)PLEPDFVPDEK 107.14 8.6103e-05 6547500.0 1263.0 1060.7 865.4 1063.2 1742.8 1601.5 1283.9 1518.8 1752.5 1628.1 1939.6 True False 1476.1635226146607 1114.685099383993 988.1267329222751 1323.6840477288617 1486.4364286732002 1770.9696670103372 1517.168010929214 1734.0945511299262 1355.5615481674333 1260.3110792354419 1457.9437897632681 1.0124968692067002 0.764559722542519 0.6777536554291445 0.9079115786376053 1.0195430297861885 1.2147036665233137 1.0406217452152682 1.1894111167423662 0.9297762764828821 0.8644442180038253 1.0 10.509719383069713 -6.554811352797875 4.607145002220345 1.0103648348439578 0.8093067701552373 0.3755841899336734 0.12199484511940692 0.16642393918744566 8.37709898172441 0.01736211248170737 0.038016668124153656 2.787331656339014e-07 6.554811352797875 -0.20105806468872045 CS(ph)PLEPDFVPDEK ddPTM_A549_PD325901_60min_R1 2 CSPLEPDFVPDEK 13 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 CS(1)PLEPDFVPDEK;CS(1)PLEPDFVPDEK 141.65 2.6294e-12 14621800.0 6059.9 6599.0 7646.9 5919.4 6001.2 4839.1 6076.8 6397.4 5138.799999999999 5605.8 6305.0 True False 6675.096586937402 7155.120889192511 8165.8646185452435 6285.027894067203 5579.696415016076 4799.691973998491 6308.055949352557 6269.798838336785 4922.83410665837 5251.848831308186 5529.5249706880395 1.207173603939222 1.2939847323453173 1.4767750687142958 1.136630710121408 1.0090733733175987 0.8680116283842851 1.1407952731548376 1.133876575577998 0.8902815581364164 0.9497830029067936 1.0 12.432939831691858 -6.562478177638854 3.3383270867291506 0.9736564910660731 1.3231870400391892 0.6574430671317943 0.10196509484060604 0.10557883649557012 2.429186869979934 0.015451637134941354 0.03534620281897749 2.738557237402595e-07 6.562478177638854 0.3495305489731161 CS(ph)VSLSNVEAR ddPTM_A549_PD325901_60min_R1 2 CSVSLSNVEAR 11 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 CS(0.836)VS(0.164)LSNVEAR;CS(0.729)VS(0.271)LSNVEAR 250.16 4.138899999999999e-62 58843000.0 9044.5 11132.0 13429.599999999999 11083.8 11723.7 10336.0 11684.0 13897.2 10087.5 14363.7 13640.5 True False 9962.690981791016 12070.132707757393 14341.013414745203 11768.421152863822 10900.267756569356 10251.827042889874 12128.641013730132 13620.009443857503 9663.557455226186 13456.773530675617 11962.804974253797 0.8328056006289996 1.0089717866114667 1.198800235029306 0.9837509830003645 0.9111799264494221 0.8569751880895602 1.0138626383890104 1.1385297572910635 0.8078003006839931 1.1248844697909162 1.0 13.546268084134114 -6.529037676645297 17.170658127089116 0.9297465868420745 1.0261039296032848 0.0 0.12851364281158875 5.932468208543585 16539.51976412793 0.017742432193373032 0.03719836224585185 2.9577558592101957e-07 6.529037676645297 0.09635734276121033 CSAS(ph)PPLR ddPTM_A549_MK2206_60min_R1 2 CSASPPLR 8 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 CSAS(1)PPLR;CSAS(1)PPLR 125.71 0.0010912 101735000.0 6487.2 9279.4 8397.6 6756.1 10310.4 8868.900000000001 7804.0 7916.1 12124.0 11436.900000000001 10669.099999999999 True False 7582.080763187505 9751.681824478015 9588.505953764849 8411.344803292852 8793.753818104293 9807.401111300644 9221.885783387796 9038.23141703951 9377.933358049619 8853.296346727982 8019.668017819798 0.9454357395268771 1.2159707612347121 1.1956238004439927 1.048839526100425 1.0965234219876019 1.2229185908329974 1.14990866989714 1.1270081750212666 1.1693667789254791 1.1039479847614455 1.0 12.96932680077393 -10.823904357137653 1.0050073275798412 0.9978448279874007 1.136480504283697 0.06742093641529234 0.08208096937862855 0.5376515829140854 0.9392762756837227 0.05431745897940931 0.012604101232038138 1.5000151412082356e-11 10.823904357137653 0.13863567629629625 CSAS(ph)PPLR ddPTM_A549_PD325901_60min_R1 2 CSASPPLR 8 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 CS(0.001)AS(0.999)PPLR;CSAS(1)PPLR 107.56 0.0018184000000000002 116106000.0 18728.2 22095.0 23591.0 20356.5 23738.0 21649.0 21602.0 23338.0 19062.0 25295.0 24828.0 True False 20629.47307702786 23957.023192409248 25192.027124207292 21613.87477203416 22070.724771654284 21472.69772170306 22424.075931067982 22872.505281693186 18260.890429890616 23697.869383128298 21774.313397659418 0.9474224376344917 1.1002424165982867 1.1569608034995609 0.9926317481201266 1.0136128918777632 0.9861480970514194 1.029840781729467 1.0504352015137164 0.8386436851714245 1.0883406034596548 1.0 14.410339607057441 -8.73546072391639 24.999041617356973 0.9238039522634994 1.0370440230379758 0.0 0.08083631678716681 198.02065148283143 190553.52756190585 0.013107302756469794 0.014859942890679675 1.8388202428568007e-09 8.73546072391639 0.1132400707744764 CSAS(ph)PPLRR ddPTM_A549_MK2206_60min_R1 2 CSASPPLRR 9 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 CSAS(1)PPLRR;CSAS(1)PPLRR 96.113 0.00037665 126181000.0 4505.3 5898.799999999999 5178.9 4599.8 6319.4 6536.9 4734.3 4983.8 7263.2 7801.6 6764.0 True False 5265.684495990366 6199.023724188088 5913.345894535666 5726.751206492868 5389.824631258561 7228.630419156963 5594.461028228198 5690.268912247384 5618.09679694705 6039.21314155348 5084.3121230969 1.0356729422785693 1.21924531266035 1.163057214302924 1.126357129114381 1.0600892511641418 1.4217518995969782 1.1003378417335563 1.1191816659716378 1.104986606039642 1.1878132174692182 1.0 12.311836883970729 -9.61240600124762 0.6752097462099073 1.0103634391169012 1.1637750913584373 0.0 0.11051028442771962 0.6070055548923778 0.5976735049856028 0.03992535399778418 0.022124946847685904 2.4411473731117034e-10 9.61240600124762 0.15341165224153608 CSAS(ph)PPLRR ddPTM_A549_PD325901_60min_R1 2 CSASPPLRR 9 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 CS(0.002)AS(0.998)PPLRR;CSAS(1)PPLRR 94.465 0.00039623 156219000.0 5660.0 6535.200000000001 7277.4 5614.3 6180.0 5916.4 6649.9 7298.0 5667.0 6962.7 6383.6 True False 6234.599033328221 7085.944239286399 7771.288126561237 5961.082559999575 5745.938119842589 5868.21879997617 6902.965583464905 7152.43566482976 5428.835697523349 6523.073933738183 5598.4576689744845 1.113627967195162 1.2656957787776557 1.3881123312994108 1.0647722841658132 1.0263430501020685 1.0481849014410964 1.233012017170325 1.2775725186719025 0.9697020176840586 1.1651555337977697 1.0 12.450813715440475 -8.230755855708097 0.4118276762956045 0.9693146695758915 1.2227326880190557 0.0 0.130762937959195 0.9350947481319147 0.3849828357868268 0.05558234537101478 0.08151930665986405 5.878197101595392e-09 8.230755855708097 0.25341801844316414 CSASENLYLDALS(ph)LDDEPEEPPAHRPER ddPTM_A549_PD325901_60min_R1 1 CSASENLYLDALSLDDEPEEPPAHRPER 28 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 CSASENLYLDALS(1)LDDEPEEPPAHRPER 114.23 1.3054e-20 2903100.0 566.17 616.91 857.95 705.91 435.21 599.8 766.34 591.05 939.88 938.78 951.3 True False 623.6471616076748 668.8991707458335 916.1756462724616 749.5124574620704 404.64235099299253 594.9154276630564 795.5034880573386 579.2610440802449 900.3801121207422 879.5052705868027 834.2961307875539 0.7475129496513043 0.8017526943513571 1.098142029506496 0.8983770028449611 0.48501046098706063 0.7130746574378473 0.9535025498756705 0.6943110757728643 1.079209262628135 1.054188360860037 1.0 9.704415744413907 -8.77188062065596 24.99585465834599 1.0374043895985219 0.8041636528194989 0.34728778670306504 0.14968716552438474 180.24988129614178 431508.6386651182 0.026883367559621296 0.028769696702448052 1.690905665773043e-09 8.77188062065596 -0.23324073677902302 CSATPSAQVKPIVSAS(ph)PPSR ddPTM_A549_MK2206_60min_R1 2 CSATPSAQVKPIVSASPPSR 20 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 CSATPSAQVKPIVS(0.271)AS(0.721)PPS(0.008)R;CSATPS(0.001)AQVKPIVS(0.096)AS(0.451)PPS(0.451)R 100.93 5.1908e-10 38146000.0 8075.6 8707.8 8863.8 8875.900000000001 12625.5 9180.400000000001 8481.8 9206.8 13180.400000000001 11889.0 13218.8 True False 9438.56385053598 9150.989825979015 10120.820123961706 11050.495898454295 10768.305674898711 10151.863834543685 10022.833269802482 10511.892094642479 10195.060444773782 9203.2666427309 9936.207139679671 0.9499161720213761 0.9209741400654848 1.0185798244427489 1.1121442762927896 1.083744080967888 1.021704126316248 1.0087182290893348 1.0579380992032505 1.026051520610958 0.9262353847252424 1.0 13.27847953433498 -5.797446223642758 7.176675719672967 1.0278191838338886 0.9354291969387171 0.3793855862529413 0.04585487149294493 0.11269936323196927 17.230359534682005 0.005355728137767471 0.017271192073816385 1.5942402747166073e-06 5.797446223642758 -0.09238998689517153 CSATPSAQVKPIVSAS(ph)PPSR ddPTM_A549_PD325901_60min_R1 2 CSATPSAQVKPIVSASPPSR 20 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 CSATPSAQVKPIVS(0.17)AS(0.807)PPS(0.023)R;CSATPSAQVKPIVS(0.158)AS(0.81)PPS(0.032)R 91.175 1.0022e-06 60638000.0 6236.8 6121.299999999999 7817.299999999999 6854.7 7208.8 8355.2 8292.3 7041.9 6781.8 7633.299999999999 8213.8 True False 6869.9553447105045 6637.163433704214 8347.828987243676 7278.099250846789 6702.4787570099115 8287.158021357729 8607.868014220667 6901.443780236315 6496.784530344776 7151.332135292876 7203.554671568182 0.953689623794435 0.9213733686093247 1.158848564055722 1.010348304785251 0.9304404648255153 1.1504261991744766 1.194947273489183 0.9580608595192215 0.901885919737242 0.9927504490968294 1.0 12.814493280317881 -8.475191792151401 24.99917858026606 0.9524211338389745 1.0458809535347737 0.15682394596263494 0.09092785489106348 527.436462761926 276501.0792461004 0.015597360346851618 0.01885606288368311 3.3481754513338793e-09 8.475191792151401 0.0934598196957992 CSDS(ph)DEEKKAR ddPTM_A549_MK2206_60min_R1 1 CSDSDEEKKAR 11 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 CS(0.376)DS(0.624)DEEKKAR 64.244 0.0012958 7311800.0 1660.6 2468.9 2355.3 1533.5 1037.5 599.18 658.8 475.16 1130.9 3062.0 3188.7 True False 1940.8686822279517 2594.5564644754813 2689.3169563806705 1909.2075688414309 884.885124367939 662.584829896506 778.4954323546747 542.5153851164706 874.752955676206 2370.2920733486426 2396.857786357049 0.8097554612023316 1.0824824398192234 1.1220177399294624 0.7965460361097223 0.3691854933591466 0.27643894171274946 0.3247983408885928 0.22634441985022075 0.3649582218249715 0.9889164417014564 1.0 11.226928596234009 -6.523006224620317 6.123841547140593 0.5764375959210782 1.005923217441846 0.39512800210218324 0.26478665981772925 0.1622073791400909 25.5446054111584 0.04673307170529677 0.10259408854897754 2.9991195331452306e-07 6.523006224620317 0.42948562152076775 CSDS(ph)DEEKKAR ddPTM_A549_PD325901_60min_R1 1 CSDSDEEKKAR 11 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 CS(0.099)DS(0.901)DEEKKAR 57.678999999999995 0.0042027 18689000.0 2573.7 2545.5 3704.3 2614.8 3494.7 3205.1 3374.9 3226.0 2561.7 2791.1 2646.7 True False 2834.980129342198 2760.0182184330256 3955.696073765467 2776.310257358333 3249.244328060502 3178.9987282475195 3503.333666316141 3161.6548992519583 2454.040657551715 2614.8694696678926 2321.172678813642 1.2213568405393969 1.18906199595787 1.7041800077481675 1.1960808787295019 1.3998287838374868 1.3695658049328387 1.5092947191273614 1.36209379341303 1.0572417467906705 1.1265294881052796 1.0 11.18063813763375 -8.77646292443325 4.786396103294598 1.025136999730408 1.3753299520599769 0.4712299236550682 0.14405048221865624 0.09745705423890076 5.605422298589708 0.023434344546416266 0.02543838336344865 1.6731584672500946e-09 8.77646292443325 0.3501929523295688 CSDVSELS(ph)SSPPGPYHQEPYVCKPEER ddPTM_A549_PD325901_60min_R1 1 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVS(0.003)ELS(0.652)S(0.188)S(0.157)PPGPYHQEPYVCKPEER 125.49 1.0043999999999998e-18 14388000.0 1415.6 1862.9 1891.9 1422.3 1512.8 1642.4 2157.6 1850.4 1028.1 1692.8 1886.0 True False 1559.3106698903587 2019.8931208481188 2020.2957109189003 1510.1522407223345 1406.5461468766791 1629.0248389359836 2239.7086486840212 1813.492320389281 984.8925323140567 1585.9163191049438 1654.0339563390376 0.9427319577777381 1.2211920517755614 1.2214354506908247 0.913011631311872 0.8503731991027944 0.9848799250419211 1.354088675205489 1.0964057378865313 0.5954487987017947 0.9588172679448116 1.0 10.69177313715137 -8.72962558042786 24.993747100285603 0.8089618997085403 1.0765779957826696 0.23649384166106036 0.17270263757643095 192.0452810604327 150875.67187163018 0.03437529048252159 0.03897626581048672 1.8636931955118516e-09 8.72962558042786 0.2676160960741293 CSDVSELSS(ph)SPPGPYHQEPYVCKPEER ddPTM_A549_MK2206_60min_R1 2 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVSELS(0.096)S(0.771)S(0.133)PPGPYHQEPYVCKPEER;CSDVSELS(0.06)S(0.439)S(0.439)PPGPY(0.063)HQEPYVCKPEER 119.75 4.5498e-18 13542400.0 1860.22 1537.53 1616.85 1615.23 2245.61 1382.94 1456.78 1552.3899999999999 2390.56 2472.8599999999997 2323.9 True False 2174.179657987523 1615.7837096783924 1846.1436423912398 2010.9614225104294 1915.2837437415799 1529.2817928787244 1721.458069134247 1772.4460364949866 1849.1019769398815 1914.2392085241424 1746.811493622838 1.2446561440229222 0.9249903126795338 1.0568648358057169 1.1512183368680222 1.096445581411498 0.8754704205128837 0.9854858840915863 1.0146750482039613 1.0585583983678146 1.0958476146467666 1.0 10.770508213529782 -5.243974187143656 24.11194668943733 1.0242134786742196 1.2446564395170543 0.40867309813976715 0.07560164006681604 1626.1946990809988 2245020.5177195827 0.009883861804991017 0.3934483845494984 5.701981617415945e-06 5.243974187143656 0.22044296084283466 CSDVSELSS(ph)SPPGPYHQEPYVCKPEER ddPTM_A549_PD325901_60min_R1 1 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVSELS(0.051)S(0.475)S(0.475)PPGPYHQEPYVCKPEER 148.22 2.3724e-33 13802000.0 904.64 1859.0 2399.7 1552.1 1870.9 1672.6 2001.3 2189.6 1182.2 1822.5 1543.1 True False 996.47838683923 2015.6644541610676 2562.5580725683617 1647.9696919251458 1739.494438254613 1658.9789001487622 2077.46056665338 2145.9267102920285 1132.5162452112422 1707.4270389702049 1353.3084825168453 0.7363275998876526 1.489434582137837 1.8935505878176333 1.2177339558681386 1.2853643206459107 1.2258689881729254 1.5350975727202838 1.585689248249663 0.8368500307520574 1.2616687629082024 1.0 10.402275019371912 -8.770230387243254 24.983867532721494 0.9229569307232877 1.3851416909864431 0.183249727537528 0.2930167696096008 143.121959599233 406748.5338311838 0.04686807394160552 0.05026053494623408 1.6973429964995615e-09 8.770230387243254 0.46218476026315547 CSDVSELSSS(ph)PPGPYHQEPYVCKPEER ddPTM_A549_MK2206_60min_R1 2 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVSELS(0.002)S(0.104)S(0.895)PPGPYHQEPYVCKPEER;CSDVSELS(0.001)S(0.01)S(0.989)PPGPYHQEPYVCKPEER 193.9 3.069599999999999e-59 141278000.0 16311.2 18198.7 17294.3 14693.7 21695.5 18720.7 17202.2 17005.4 23738.0 26011.0 23748.0 True False 19064.131789447536 19124.9360970675 19746.89179244013 18293.65715962525 18504.12068985507 20701.712048205067 20327.617071116543 19415.967526853332 18361.380901796605 20135.097034575945 17850.716188543032 1.0679757376728278 1.0713820047927427 1.1062240631619085 1.0248136246413748 1.0366038255502268 1.159713247891525 1.1387563869377542 1.0876856324294097 1.0286075196008846 1.1279713834394542 1.0 14.123694337329413 -8.864462880767222 3.202618085245002 1.0118480387063034 1.0873909959349184 0.0 0.05137977050341168 0.17693772044548162 3.4397806389427372 0.007357406990054174 0.007755891651618052 1.3662718462172378e-09 8.864462880767222 0.07554295722861504 CSDVSELSSS(ph)PPGPYHQEPYVCKPEER ddPTM_A549_PD325901_60min_R1 2 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVSELS(0.017)S(0.111)S(0.873)PPGPYHQEPYVCKPEER;CSDVSELS(0.004)S(0.154)S(0.842)PPGPYHQEPYVCKPEER 159.59 2.4231999999999995e-41 308420000.0 9268.400000000001 10355.5 10129.1 9890.5 10410.599999999999 9277.7 9488.400000000001 10838.3 8180.9 9685.2 11431.7 True False 10209.321144964537 11228.194327630408 10816.521637226402 10501.413722044745 9679.395370620266 9202.145487211637 9849.48625425171 10622.121604018139 7837.085222846085 9073.674819113425 10025.673371516965 1.0183177495059152 1.1199441585170544 1.07888230908821 1.0474522092330838 0.9654608734929987 0.9178580975273962 0.9824264056152273 1.0594920870049178 0.7817016306467075 0.9050439290084816 1.0 13.29141151768832 -6.9544698750633644 0.8783801409681012 0.9099917036324816 1.0863587273668274 0.3700356830705058 0.07190101919500141 0.5205751344346301 0.7650318797334369 0.016089258214559587 0.04979118017398901 1.110529564800737e-07 6.9544698750633644 0.17636702373434576 CSGPGLS(ph)PGMVR ddPTM_A549_MK2206_60min_R1 4 CSGPGLSPGMVR 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 CS(0.001)GPGLS(0.999)PGMVR;CS(0.003)GPGLS(0.997)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR 168.83 1.351e-15 178051700.0 32331.4 38856.7 33159.6 31906.999999999996 45605.7 38941.2 33097.1 37441.1 52113.2 47243.9 49169.7 True False 37788.14989316199 40834.34005961537 37862.12989716833 39724.216432359644 38897.16194350546 43061.931936923495 39110.41465419839 42748.490583559804 40309.64340767996 36571.470177686446 36959.506475316026 1.022420305271105 1.1048399709256729 1.0244219554840412 1.0748037574281484 1.052426443234125 1.165111118723489 1.0581963447027865 1.1566304493841129 1.0906434433750185 0.9895010422314828 1.0 15.17365787195364 -10.59229914701059 0.9834687488742951 1.0021881920737428 1.0842035030815553 0.36293949457530505 0.044567266754461814 0.46385605745977887 0.8309423858704179 0.024937655544635298 0.007622926060795022 2.556824110493648e-11 10.59229914701059 0.08201531100781256 CSGPGLS(ph)PGMVR ddPTM_A549_PD325901_60min_R1 5 CSGPGLSPGMVR 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CS(0.004)GPGLS(0.996)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR 147.02 6.2131e-12 424448000.0 35973.2 43797.9 45817.8 40765.5 44652.1 39532.0 41959.2 46059.700000000004 36321.299999999996 43277.600000000006 43637.49999999999 True False 39625.17278192983 47488.90274174344 48927.27143281357 43283.49234983216 41515.8905373824 39210.06449879283 43555.98031695526 45141.00315036435 34794.84207172311 40545.04495019859 38270.36414090391 1.0354009864143905 1.24087930198152 1.2784637024271062 1.1309924355689667 1.084805213363769 1.0245542570336965 1.1381125132907217 1.1795289687906836 0.9091850274435693 1.0594371352443828 1.0 15.223940007803753 -8.759625515029756 24.999949916480514 0.9571151471415195 1.1412006606445453 0.38470047709101574 0.08143397182013662 28.030150326491047 386330.2976691322 0.01403891433536648 0.015526506073340357 1.7392999519894692e-09 8.759625515029756 0.18408551350302582 CSS(ph)LGDLLGEGPR ddPTM_A549_MK2206_60min_R1 1 CSSLGDLLGEGPR 13 0 Q8TD55-2;Q8TD55 Q8TD55-2 PLEKHO2 Pleckstrin homology domain-containing family O member 2 1 CS(0.194)S(0.806)LGDLLGEGPR 64.313 0.0060436000000000005 1312400.0 2239.1 2293.2 1572.1 1205.2 2641.0 2112.8 2456.0 2047.8 3013.5 3039.1 2678.5 True False 2617.005339260876 2409.9140849508576 1795.0474194905348 1500.4740541034837 2252.512398511546 2336.3750936368656 2902.2234090210673 2338.0819211244802 2330.9470615706473 2352.5651992533826 2013.3545271607104 1.299823406139728 1.1969645943823848 0.8915704587914586 0.7452607247564564 1.1187857717677288 1.1604389898145202 1.4414865190751402 1.1612867428876075 1.1577429757777509 1.1684803483522779 1.0 10.975385520280385 -5.529882524955777 24.496364258282767 1.08244604267171 1.2741088054406744 0.11950966771190719 0.16873511869510543 173.32596057028644 606228.2043842116 0.024476087033417016 0.09526925360621068 2.9520076257774334e-06 5.529882524955777 0.19166276276896443 CSS(ph)PTVGPPPLPQK ddPTM_A549_MK2206_60min_R1 2 CSSPTVGPPPLPQK 14 0 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 CS(0.002)S(0.996)PT(0.002)VGPPPLPQK;CS(0.083)S(0.706)PT(0.211)VGPPPLPQK 212.1 2.6026999999999994e-38 55620000.0 6477.1 8014.900000000001 7060.3 5886.0 8844.8 7359.700000000001 7347.0 6227.3 10585.8 9832.4 9528.1 True False 7570.276130108796 8422.824175594205 8061.556704935446 7328.070264232581 7543.741636635716 8138.498569026523 8681.854798891613 7110.038845306415 8188.133202048972 7611.254011101627 7162.009807817796 1.0570044349625647 1.1760419772673516 1.1255997857103932 1.0231862927964046 1.0532995400817846 1.136342840544958 1.2122092864791678 0.9927435225717436 1.1432731065393258 1.0627259966599671 1.0 12.806148778981012 -10.935049502404823 1.070122583579786 0.9970695721143985 1.1058944376836248 0.12291749808850361 0.06548906109233674 0.584963557492271 1.1352490895208542 0.049928648653370496 0.01047504952750216 1.1613162354075712e-11 10.935049502404823 0.10882486556922633 CSS(ph)PTVGPPPLPQK ddPTM_A549_PD325901_60min_R1 4 CSSPTVGPPPLPQK 14 0 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 CS(0.001)S(0.996)PT(0.003)VGPPPLPQK;CS(0.151)S(0.776)PT(0.073)VGPPPLPQK;CS(0.015)S(0.97)PT(0.015)VGPPPLPQK;CS(0.051)S(0.934)PT(0.015)VGPPPLPQK 254.89 9.726199999999998e-70 86739100.0 20190.600000000002 24070.7 26130.4 22059.7 23161.2 24270.2 24926.0 25768.3 22253.000000000004 23210.4 23441.0 True False 22240.334848465864 26099.222365129 27903.766078860004 23422.277567786306 21534.43721380229 24072.551537959152 25874.57257003057 25254.331041659723 21317.783796892032 21744.89138288836 20557.905604742 1.0818385528210512 1.2695467557312263 1.3573253333950306 1.1393318958709293 1.047501512451494 1.1709632294647 1.2586190961039434 1.2284486332029085 1.0369628213476547 1.057738653001333 1.0 14.327405672896276 -8.815734329571367 5.8941655136461355 1.016525516617499 1.1967680453555805 0.42401247356108296 0.08399036121743059 0.12505887862137105 9.162931239299072 0.015162570855750809 0.01616706659994158 1.5285008002169958e-09 8.815734329571367 0.18024252873808155 CSS(ph)PVDTECSHAEGSR ddPTM_A549_PD325901_60min_R1 1 CSSPVDTECSHAEGSR 16 0 T1ECW5;O75170-6;O75170-2;O75170-4;O75170-3;O75170-5;O75170;A0A0A0MSJ8 T1ECW5 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 1 CS(0.251)S(0.749)PVDT(0.001)ECSHAEGSR 96.391 1.5143e-06 7062300.0 808.14 917.69 786.15 929.15 820.97 663.87 667.27 1204.4 770.71 887.13 1036.4 True False 890.1817778787752 995.0269569333357 839.5028665039868 986.5414852472449 763.307899392746 658.4636628253969 692.6633249941549 1180.377297166478 738.3197389162208 831.1164604014473 908.9293702809009 0.9793739832652433 1.0947241771116127 0.9236172731931215 1.0853884993752136 0.8397879135062484 0.7244387565800645 0.7620650708867402 1.2986457867476404 0.8122960518791973 0.9143905869656233 1.0 9.828024381769007 -6.760427974586223 24.999955904019536 0.909255599631212 1.0191180845682448 0.11536175087135192 0.15097951177738586 51.43634929908685 1271337.8598962913 0.022220868945669298 0.04426275955479685 1.7360891600865288e-07 6.760427974586223 0.10986248493703277 CSS(ph)TPDNLSR ddPTM_A549_PD325901_60min_R1 1 CSSTPDNLSR 10 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 CS(0.095)S(0.452)T(0.452)PDNLS(0.002)R 48.998000000000005 0.030048000000000002 2250100.0 766.2 653.67 689.75 721.48 642.57 706.54 806.48 765.5 813.56 968.63 708.08 True False 843.9840599533719 708.7570649550645 736.5605828036958 766.0441810000348 597.4380999461575 700.7861724925908 837.1710377227901 750.2315019768675 779.3689024311097 907.47053649257 620.990648888943 1.3590930257378298 1.141332910927323 1.1861057555722083 1.2335840843507337 0.9620726189920492 1.1284971420204402 1.3481218102408308 1.2081204496704712 1.2550412857673978 1.4613272166274769 1.0 9.278427733738802 -10.843866779417182 1.0703206012563533 0.9990852094364273 1.19989504805056 0.0 0.17078823606722476 0.48930361743948086 0.9877204657348515 0.07394620998123834 0.017778055201312096 1.4326272927754898e-11 10.843866779417182 0.2008098386141326 CSS(ph)VTGVQR ddPTM_A549_MK2206_60min_R1 1 CSSVTGVQR 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 CS(0.005)S(0.994)VT(0.001)GVQR 144.47 3.3778e-05 12429000.0 1493.8 1426.0 1889.6 1749.5 2992.1 2984.7 2780.6 2691.5 3960.6 4131.9 3295.9 True False 1745.9169200964209 1498.5773090615403 2157.5736937022543 2178.12757853804 2551.9660536109027 3300.5389729164876 3285.7990273306136 3073.028367373054 3063.5304237785654 3198.5009202708193 2477.4370677875627 0.7047270515152118 0.604890161912295 0.8708894049240341 0.8791858355793406 1.0300830995032688 1.3322392789835762 1.326289603903015 1.2404062276009196 1.2365724496543535 1.2910523386683608 1.0 11.274632694992542 -6.465655305763652 1.424960968755797 1.155531708835007 0.6756698895241978 0.7738738169410577 0.11705673289804426 0.19707778770854678 0.7662848753805304 0.02105535028728533 0.07057111737612604 3.4225097517041607e-07 6.465655305763652 -0.4798618193108092 CSS(ph)VTGVQR ddPTM_A549_PD325901_60min_R1 2 CSSVTGVQR 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 CS(0.001)S(0.928)VT(0.071)GVQR;CS(0.002)S(0.992)VT(0.006)GVQR 162.36 6.1685e-06 43140000.0 8589.599999999999 9864.8 12572.0 9186.6 10324.5 7389.6 9238.2 11085.0 7941.7 9958.3 10392.2 True False 9461.60986867069 10696.141316518617 13425.211521577477 9754.035417717641 9599.342737591398 7329.421547614075 9589.764756337016 10863.900978985721 7607.9379670056815 9329.531238505886 9114.025281583536 1.0381373297032113 1.173591359037814 1.4730276806128066 1.0702225543994657 1.0532495182988497 0.8041914874237226 1.0521986125839253 1.1919981175538443 0.8347505884561057 1.023645529858011 1.0 13.153872657150451 -6.684349494324029 2.725520680800544 0.9473367307310745 1.2253095254793631 0.2999498023102659 0.14324694013375644 0.2014339161789426 3.031444708972282 0.021220486405949975 0.04753759119030225 2.068476092510714e-07 6.684349494324029 0.2779727947482886 CSSSSGGGS(ph)SGDEDGLELDGAPGGGKR ddPTM_A549_MK2206_60min_R1 1 CSSSSGGGSSGDEDGLELDGAPGGGKR 27 1 Q9P258 Q9P258 RCC2 Protein RCC2 1 CS(0.022)S(0.022)S(0.02)S(0.105)GGGS(0.435)S(0.396)GDEDGLELDGAPGGGKR 67.283 0.00014068 6070600.0 1431.3 1279.8 1406.5 1347.6 1879.2 1162.1 1164.6 1737.0 1860.3 2150.0 2310.8 True False 1672.8684480747127 1344.9363535322284 1605.962849381996 1677.7620604960637 1602.7721693611882 1285.0726506604512 1376.1927451734275 1983.225069339399 1438.9450202886605 1664.3135067601509 1736.9645851644468 0.9630987657220047 0.7743026916146922 0.924580076703148 0.965916101471477 0.9227431480472275 0.7398381415697012 0.7922975269200072 1.1417763414857636 0.8284250770446357 0.9581735407705979 1.0 10.76235262401351 -11.042484955150838 1.2526577124229066 1.0019010973390308 0.8871215570066263 0.07656622787309353 0.10776529880710446 0.8130931525122247 2.2097468518339727 0.08204302518369212 0.017071350782581197 9.068073777021472e-12 11.042484955150838 -0.11477954033240445 CSST(ph)PDNLSR ddPTM_A549_PD325901_60min_R1 1 CSSTPDNLSR 10 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 CS(0.021)S(0.187)T(0.792)PDNLSR 82.417 0.0011113 2971500.0 1049.2 819.02 897.51 777.4 758.99 1017.0 920.45 1127.0 932.9 706.63 1009.2 True False 1155.7140116197825 888.0416897509399 958.4204257660673 825.4182323965008 705.681160773354 1008.7178891852753 955.4782284395665 1104.5211008856038 893.6934572471384 662.0132612057696 885.0747978458946 1.3057811774016983 1.0033521369179939 1.0828694118267541 0.9325971481793554 0.7973124559538347 1.1396979008331327 1.079545176029213 1.2479409690274768 1.00973777518264 0.747974366479517 1.0 9.789655572565213 -5.259309435863737 24.374263031816913 1.0203935696141313 1.3057813168122845 0.28000690966825403 0.13682070572989102 112.74304540577585 1290053.9041659015 0.014797658939385281 0.13406179402666935 5.504153843741071e-06 5.259309435863737 0.2853877471981532 CSSVT(ph)GVQR ddPTM_A549_MK2206_60min_R1 1 CSSVTGVQR 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 CS(0.009)S(0.222)VT(0.768)GVQR 136.84 4.6838999999999997e-05 13133000.0 1228.7 1459.2 1280.8 1501.9 2364.8 2572.3 2242.9 2559.7 3861.5 3300.9 3248.7 True False 1436.0745211691462 1533.4670472528744 1462.4366992452622 1869.865567422854 2016.941052631618 2844.4990786454537 2650.4058974321465 2922.5453137524833 2986.8764155483846 2555.224397425386 2441.958130441291 0.5880831875318151 0.6279661506627711 0.5988786953447816 0.7657238443662205 0.8259523484406068 1.1648435094714007 1.085360909506334 1.196804022689916 1.2231480869037752 1.046383377983482 1.0 11.253822748901179 -6.92332707805043 1.6162375311099373 1.1190026203943455 0.6129387821091479 0.9061288777394466 0.07211428642778146 0.09896811995266641 0.5182793840073673 0.014231426979532415 0.032280710698382155 1.1930892206500028e-07 6.92332707805043 -0.5060638382851976 CSTVS(ph)PVSGINTR ddPTM_A549_MK2206_60min_R1 1 CSTVSPVSGINTR 13 0 Q8N0Z3;H7C5N4 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 CS(0.001)T(0.017)VS(0.813)PVS(0.169)GINT(0.001)R 97.69 0.00016258 4339500.0 1815.3 3051.9 2163.1 2605.0 3564.7 2615.0 2437.0 2342.6 3860.1 3365.9 3791.6 True False 2121.6782601760815 3207.228674281144 2469.8601062909315 3243.225116942895 3040.337352129537 2891.7175643034857 2879.7713549610535 2674.6707239116176 2985.7935133130454 2605.540852280925 2850.041077163543 0.7444377827310641 1.1253271750992047 0.8666050907410148 1.1379573238188772 1.0667696604413097 1.0146231180574494 1.0104315260701784 0.9384674295900115 1.0476317472183974 0.9142116838800257 1.0 11.476766997410719 -5.247449730921719 24.47642805489958 1.02144952354526 0.744437531609515 0.4785370890256325 0.07982647475046874 951.3296045316195 1664419.043589718 0.008838456839699518 0.24848060964515137 5.6565322699942185e-06 5.247449730921719 -0.2770119919357451 CSVS(ph)LSNVEAR ddPTM_A549_MK2206_60min_R1 2 CSVSLSNVEAR 11 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 CS(0.484)VS(0.514)LS(0.001)NVEAR;CS(0.01)VS(0.869)LS(0.12)NVEAR 117.27 1.7725e-05 40807000.0 6140.6 7322.599999999999 7570.5 6354.0 9003.8 7435.5 6875.5 7087.4 10953.6 9396.8 10507.6 True False 7176.983156743923 7695.289062646588 8644.110736755347 7910.7302852419 7679.352947261742 8222.319674714561 8124.689352086465 8092.060654252199 8472.627089304879 7274.056353638963 7898.272924993049 0.9086775330380521 0.9743002217985979 1.094430493709858 1.0015772258526836 0.9722825509057096 1.041027545236644 1.0286665742300385 1.0245354561813045 1.0727189563802437 0.9209679663792277 1.0 12.947321505680272 -5.521741117190019 5.894357889076677 1.0312703359763877 0.9226912311413158 0.2892498062912078 0.04630881632838698 0.08280883558087533 11.212881026463316 0.004945866295510069 0.023023949733566043 3.0078687579956585e-06 5.521741117190019 -0.10857910483507194 CT(ph)CPDQFPMIK ddPTM_A549_MK2206_60min_R1 1 CTCPDQFPMIK 11 0 A0A5E8;Q99501;Q99501-2;Q99501-4;Q99501-3 A0A5E8 GAS2L1 GAS2-like protein 1 1 CT(1)CPDQFPMIK 44.765 0.055730999999999996 1835200.0 883.48 1202.5 1148.7 615.42 853.09 1264.5 737.29 945.11 1428.0 1383.3 1627.0 True False 1032.589824987806 1263.7021137072234 1311.6029328724494 766.1979276272533 727.6015910814896 1398.308550692833 871.2460493636582 1079.0822367779856 1104.5602800474146 1070.8115692564265 1222.970997084366 0.8443289558375139 1.033305055246578 1.0724726391708284 0.6265053950207435 0.5949459086242717 1.143370164972417 0.7124012355491336 0.8823449119812166 0.9031778207993081 0.8755821452915102 1.0 10.256174475233273 -9.87307263710067 0.7592990743387864 0.9917324088915025 0.8650525963160848 0.01035535009776356 0.16960751749812747 1.214495407142003 1.4462796471541681 0.07302240624905393 0.03550708623116853 1.3394526410767448e-10 9.87307263710067 -0.12667981257541772 CT(ph)SHSETPTVDDEEKVDER ddPTM_A549_MK2206_60min_R1 2 CTSHSETPTVDDEEKVDER 19 1 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 CT(0.468)S(0.468)HS(0.063)ET(0.001)PTVDDEEKVDER;CT(0.548)S(0.45)HS(0.001)ETPTVDDEEKVDER 119.01 2.5328e-14 90049000.0 762.81 950.16 1002.0 1022.1700000000001 1376.13 1500.1 1453.05 1228.31 2427.0 1921.17 2242.9 True False 891.553679086056 998.5190855385081 1144.0986669610804 1272.601695886955 1173.7030999483875 1658.839586314211 1717.0503764161494 1402.4267040416119 1877.2883751226025 1487.1763626894876 1685.9260291091111 0.5288213502209093 0.5922674354023424 0.6786173575869476 0.7548383938051137 0.6961771036707962 0.983933789307937 1.0184612769300947 0.8318435564949976 1.1135057782544662 0.8821124634248347 1.0 10.719325523327276 -6.888988157795782 0.6431580210781511 1.0486985027624474 0.532033532714524 0.7417230292325596 0.09253497094775241 0.25625691066697465 0.18356826933306122 0.01599966104066052 0.06631785871948614 1.291254482651274e-07 6.888988157795782 -0.5166649700479233 down CT(ph)SHSETPTVDDEEKVDER ddPTM_A549_PD325901_60min_R1 2 CTSHSETPTVDDEEKVDER 19 1 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 CT(0.547)S(0.452)HS(0.001)ETPTVDDEEKVDER;CT(0.536)S(0.456)HS(0.008)ETPTVDDEEKVDER 117.31 3.0603e-14 148896000.0 1695.2 1807.5 1569.1799999999998 1163.19 1904.84 1433.27 1633.1599999999999 2057.91 1520.77 1814.98 1703.27 True False 1867.2954560597188 1959.8243684218023 1675.6739910458905 1235.0376045038404 1771.0506097412563 1421.597924319154 1695.3107974994423 2016.8633706508353 1456.8573255201325 1700.381853053576 1493.7785879181306 1.2500483479697995 1.311991204234087 1.121768650721702 0.8267875938863899 1.1856178847827494 0.951679141619258 1.1349143783498636 1.3501755795426982 0.9752833099251643 1.1383091622858157 1.0 10.54475060830145 -2.0000000000000964 0.4073063855818507 1.0152630557767544 6.067762797804246 0.07674054522826379 0.14794545314878677 64.07350230038642 0.7370189888764119 0.031625643122967804 264.4308863221612 0.009999999999997781 2.0000000000000964 5.052499742027491 CTGDFSPS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 CTGDFSPSPEK 11 0 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 CTGDFS(0.179)PS(0.821)PEK;CTGDFS(0.068)PS(0.932)PEK 174.9 2.6206999999999998e-15 31534000.0 13689.599999999999 17268.4 13909.900000000001 15204.4 20526.2 15183.900000000001 14847.0 16048.7 23546.0 20197.4 19024.5 True False 16000.069801413809 18147.287800700058 15882.532981598735 18929.47868255145 17506.823170892723 16790.650219742904 17544.50771731914 18323.652372082455 18212.8685952356 15634.793312296502 14300.191600511082 1.1188710087522167 1.2690241017506005 1.1106517608499107 1.3237220319394125 1.2242369654870247 1.1741556119529766 1.2268722131451797 1.2813571233148777 1.273610109852282 1.0933275405720944 1.0 13.803746856570971 -10.786959623638204 0.9928286374990317 0.997643526476129 1.2262811155162145 0.4788746421931557 0.06849969053780602 0.2712703742607015 0.46693327695374015 0.0442906004169904 0.01068958862773841 1.6332037798060685e-11 10.786959623638204 0.22863758904008558 CTGDFSPS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 CTGDFSPSPEK 11 0 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 CTGDFS(0.055)PS(0.945)PEK;CTGDFS(0.001)PS(0.999)PEK 188.88 6.9381e-19 49118000.0 23427.0 26936.0 25493.0 22731.0 27322.0 22715.0 25569.0 27152.0 22118.0 25365.0 26362.0 True False 25805.291793954115 29205.991251900214 27223.10828186242 24135.042244153407 25402.99697578307 22530.016571134238 26542.04228689366 26610.43205966805 21188.457377416893 23763.449571182016 23119.641122486602 1.1161631643518635 1.2632545244611912 1.177488358821656 1.043919415370129 1.0987625993500232 0.9744968121162191 1.148030029803463 1.1509881108745343 0.9164699947184127 1.0278468184382514 1.0 14.496831383148107 -7.025522313400924 0.41263122274881225 0.9625429678123653 1.2232658433301513 0.30242366505672935 0.08065526007522718 1.1009971331524897 0.3038638463661076 0.02624772302512022 0.115159630061055 9.429261640793175e-08 7.025522313400924 0.26072287551778606 CTLPEHES(ph)PSQDISDACEAESTER ddPTM_A549_MK2206_60min_R1 2 CTLPEHESPSQDISDACEAESTER 24 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 CTLPEHES(0.551)PS(0.449)QDISDACEAESTER;CT(0.003)LPEHES(0.779)PS(0.214)QDIS(0.003)DACEAES(0.001)T(0.001)ER 101.3 3.9136e-11 147392000.0 1089.37 1272.52 863.24 563.41 1346.25 999.46 1054.43 1078.54 1073.2 1593.04 1789.38 True False 1273.2290234605948 1337.2858326276234 985.6604124425983 701.4454752924362 1148.2184083665907 1105.2221938121463 1246.0062822370064 1231.4263478902226 830.1219135482391 1233.171157585669 1345.0275616243532 0.9466192811119429 0.9942441856080776 0.7328180035598996 0.521510112733541 0.8536764904504399 0.8217096997457803 0.9263797395588225 0.9155398618025808 0.6171783666244902 0.9168370914990038 1.0 10.393420020723815 CTLPEHES(ph)PSQDISDACEAESTER ddPTM_A549_PD325901_60min_R1 2 CTLPEHESPSQDISDACEAESTER 24 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 CTLPEHES(0.945)PS(0.055)QDISDACEAESTER;CTLPEHES(0.66)PS(0.218)QDIS(0.122)DACEAESTER 150.24 1.2499e-28 227460000.0 3832.1000000000004 3727.8 4284.8 2611.8 4179.7 2968.1 3648.4 3863.2000000000003 3309.5 3911.0 4269.2 True False 4221.131970957081 4041.9547887152394 4575.59229459554 2773.1249541718294 3886.132291182215 2943.928777670418 3787.241858481085 3786.1454453782276 3170.413224096264 3664.058792544566 3744.115464688558 1.1274043257392443 1.079548648228309 1.2220756378238846 0.7406622419435729 1.0379306749038708 0.7862815144017732 1.0115184465327685 1.0112256101837835 0.8467722894758494 0.9786180012611734 1.0 11.870409211507809 -6.24354645261322 24.997989686157048 0.9259234405091948 1.1366634510503415 0.49012749087424234 0.09823082017556369 532.568297718753 744043.6126514293 0.013165899077183874 0.03475562855214992 5.707600237898374e-07 6.24354645261322 0.21074001054114666 CTNINSDS(ph)PVGKK ddPTM_A549_MK2206_60min_R1 1 CTNINSDSPVGKK 13 1 H3BLY2;A0A087WV86;Q6PGQ7-2;Q6PGQ7 H3BLY2 BORA Protein aurora borealis 1 CT(0.027)NINS(0.156)DS(0.817)PVGKK 49.463 0.012681999999999999 4509300.0 2005.0 2518.7 2270.9 1889.1 2427.6 1756.8 1992.2 1963.0 2751.4 2905.8 3245.1 True False 2343.394982456369 2646.8910717624813 2592.9477672673843 2351.9295848049223 2070.503255822274 1942.7034099305417 2354.1569525455106 2241.261261435373 2128.2122930829537 2249.3777618342547 2439.252109796237 0.9607022468260258 1.085124026799997 1.0630093366954128 0.9642011071177841 0.8488270841324529 0.7964340389943643 0.9651142426365125 0.9188313304862107 0.8724855805334258 0.9221587849819084 1.0 11.25222316077735 -6.439963309814381 4.769218990701645 0.9220289139854565 1.0396434265797123 0.46237697616314577 0.060702062192975706 0.19421535902792447 7.748140795713058 0.010155626643484992 0.02398924521767727 3.6310872972570365e-07 6.439963309814381 0.11761451259425582 CTNSEVTVQPS(ph)PYLSYR ddPTM_A549_MK2206_60min_R1 2 CTNSEVTVQPSPYLSYR 17 0 X6RA30;O75794 X6RA30 CDC123 Cell division cycle protein 123 homolog 1 CTNSEVT(0.001)VQPS(0.861)PY(0.128)LS(0.005)Y(0.005)R;CTNSEVTVQPS(1)PYLSYR 126.63 6.9993e-11 5794800.0 2245.37 2834.4 2653.7 2403.0299999999997 4016.4 3323.4 2666.42 2731.1 4537.7 4131.6 3893.4 True False 2624.3335619740915 2978.6588532987575 3030.034563387844 2991.772457876116 3425.5928804929067 3675.079982105624 3150.8739993004697 3118.2417886429666 3509.9181952178947 3198.268690479179 2926.561327626473 0.8967293926837006 1.0178016176119353 1.0353565923203432 1.0222825093853511 1.170518057542694 1.2557672881867203 1.076647179594873 1.06549682017836 1.1993318445387033 1.0928418483111264 1.0 11.514990796077674 -5.377418098166614 0.9888752824761095 1.1062835642272635 0.8269262927518992 0.4537113840398942 0.07141414880232119 1.4988337599186834 1.265994777565461 0.013616335838587557 0.42349996068944723 4.193550736990016e-06 5.377418098166614 -0.27935727147536427 CTNSEVTVQPS(ph)PYLSYR ddPTM_A549_PD325901_60min_R1 2 CTNSEVTVQPSPYLSYR 17 0 X6RA30;O75794 X6RA30 CDC123 Cell division cycle protein 123 homolog 1 CTNSEVT(0.001)VQPS(0.997)PYLS(0.001)YR;CTNSEVT(0.002)VQPS(0.998)PYLSYR 135.08 2.5355e-12 10863900.0 2568.3999999999996 3423.5 3508.7 3152.6 4432.6 3946.3999999999996 3985.0 4084.8 3703.3 4264.1 4367.4 True False 2829.1420772438546 3712.0103597742946 3746.821481527116 3347.328941925917 4121.26946763985 3914.2618268247493 4136.651355675671 4003.325459536389 3547.6631795726557 3994.8639982841423 3830.237487229646 0.7386335930021225 0.9691332122748182 0.9782217144548748 0.8739220356665118 1.0759827507773423 1.0219371096114138 1.079998660518476 1.0451898799705852 0.9262253819510884 1.0429807581392474 1.0 11.903218131388412 -5.259365287673784 4.5392821819656355 0.9830362385520163 0.7223305437150588 0.5839251455105947 0.06212634035887527 0.11429888622051816 6.010322080342452 0.008712338652311686 0.09490433209012304 5.5034460355575644e-06 5.259365287673784 -0.2607056948369575 CTS(ph)HSETPTVDDEEKVDER ddPTM_A549_MK2206_60min_R1 2 CTSHSETPTVDDEEKVDER 19 1 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 CT(0.045)S(0.426)HS(0.231)ET(0.295)PT(0.003)VDDEEKVDER;CT(0.032)S(0.945)HS(0.009)ET(0.012)PT(0.002)VDDEEKVDER 159.2 3.8827e-27 50767000.0 8377.8 8617.4 8092.5 8314.9 12662.7 11915.0 11702.5 11880.3 16795.4 16987.6 15950.599999999999 True False 9791.767822455344 9055.988852108634 9240.138186010527 10352.05087327005 10800.03360417726 13175.837391463117 13828.692770386428 13564.36890689285 12991.268716742554 13150.089361599405 11989.625805835216 0.8166866907297308 0.7553187229330532 0.7706777789106192 0.8634173443704826 0.9007815405649279 1.0989364976720613 1.1533881869487668 1.1313421391592742 1.0835424663895556 1.0967889719460138 1.0 13.549499012739446 -6.936724160466924 2.0655809694947194 1.0608991710389784 0.7872231680800771 0.8778245472297329 0.05072137285253138 0.10256577258737033 0.8818160716423272 0.009318527049869026 0.019607139471241448 1.156846773184274e-07 6.936724160466924 -0.27367600295890127 CTS(ph)HSETPTVDDEEKVDER ddPTM_A549_PD325901_60min_R1 1 CTSHSETPTVDDEEKVDER 19 1 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 CT(0.006)S(0.496)HS(0.496)ET(0.001)PTVDDEEKVDER 159.12 3.9218000000000005e-27 42757000.0 10193.0 10797.0 12307.0 11457.0 13873.0 10064.0 11502.0 12182.0 11821.0 13630.0 13045.0 True False 11227.78585631 11706.901082074794 13142.22702800301 12164.672869265129 12898.608339251821 9982.04212070856 11939.71490413591 11939.02045340588 11324.20447863482 12769.39947388965 11440.547699068273 0.9814028271762198 1.0232815237532913 1.1487410719919748 1.063294624457169 1.1274467515486426 0.8725143571160938 1.0436314080582252 1.0435707072291829 0.9898306249408909 1.116152811017046 1.0 13.48186850018109 -7.213652108550136 24.999990858224525 0.9954853065703456 1.0704342904123532 0.12475822767625178 0.07003147571543449 404.28324649404084 211501.35504275069 0.008371440912041018 0.014499744988741554 6.114316158779978e-08 7.213652108550136 0.07494898384200754 CTSVSS(ph)LDSFESR ddPTM_A549_MK2206_60min_R1 1 CTSVSSLDSFESR 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 CT(0.001)S(0.001)VS(0.149)S(0.829)LDS(0.017)FES(0.003)R 54.343 0.020071000000000002 968850.0 1103.7 1729.1 1323.5 1534.3 2136.4 1845.3 1399.3 1342.7 2373.3 2094.4 2514.4 True False 1289.9775771257316 1817.1038044167653 1511.1922013203505 1910.2035688773442 1822.1383900719675 2040.5684211889957 1653.5346971674192 1533.0318368462945 1835.7513393813251 1621.2735853760282 1890.0050860903068 0.6825259818714027 0.9614279970937294 0.7995704416046973 1.0106869991703675 0.9640917918592857 1.079662925886695 0.8748837287988183 0.8111257732208264 0.9712943911589086 0.8578144034150825 1.0 10.884174401472134 -4.520251329771795 0.9174871092813859 0.9695240638688273 5.175208026967589e-12 0.3318377815068291 0.09022619782680143 4.711985797357605 1.1222987481212867 0.012455756232112314 6.337138108089365 3.0182045552183726e-05 4.520251329771795 -0.9695240638636521 CTVDGS(ph)PHELESR ddPTM_A549_MK2206_60min_R1 2 CTVDGSPHELESR 13 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16 F5GYK2 STRN4 Striatin-4 1 CT(0.017)VDGS(0.979)PHELES(0.003)R;CT(0.006)VDGS(0.966)PHELES(0.028)R 70.27199999999999 0.0028678 7087500.0 3221.2 4180.2 3685.0 3436.8999999999996 5157.1 3783.0 4197.3 3590.7 5901.6 5491.4 6986.7 True False 3764.8598092211746 4392.954324922194 4207.588410929723 4278.940654288303 4398.497421569059 4183.314549047834 4959.895079268785 4099.692721057559 4564.897022918645 4250.888926057064 5251.7095668895745 0.7168827143369592 0.8364808200016296 0.8011845204573542 0.8147709997646705 0.837536304235147 0.7965624328166118 0.9444343820037971 0.7806396505444378 0.8692211488043678 0.8094295527798454 1.0 12.358571418335009 -14.999999999401608 0.11332998788426914 1.607658205485156 0.723071248357213 0.0011349671777585169 0.07438084372780361 33.11548898223711 0.2643484482528354 4.596730873060826 0.19988969894552142 1.0000000013778496e-15 14.999999999401608 -0.884586957127943 CTVDGS(ph)PHELESR ddPTM_A549_PD325901_60min_R1 2 CTVDGSPHELESR 13 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16 F5GYK2 STRN4 Striatin-4 1 CTVDGS(1)PHELESR;CTVDGS(0.998)PHELES(0.001)R 111.83 2.4169e-06 5934600.0 4892.7 4254.5 4668.6 5565.3 4505.4 5718.5 4547.0 4811.5 5002.0 4588.4 5288.6 True False 5389.40330218463 4613.0416461690465 4985.439270572429 5909.055941286654 4188.956246786217 5671.930431962634 4720.038573213875 4715.530857951271 4791.78333492356 4298.687640938758 4638.135727197584 1.1619761945692284 0.9945896190830751 1.0748799870901342 1.2740153132295193 0.9031551668965999 1.2228901363759102 1.0176585703467065 1.0166866895032522 1.033127018432212 0.9268136798437495 1.0 12.179329323294079 -7.93085106784067 24.99996311491458 1.0162038442616934 1.0992380324080582 0.21208194467503905 0.09922697132574378 67.12099684964436 24265.82145066517 0.013450722631450506 0.018584843210673697 1.1725974142305383e-08 7.93085106784067 0.08303418814636476 CVACQNPDKPSPST(ph)SVPAPASFK ddPTM_A549_PD325901_60min_R1 1 CVACQNPDKPSPSTSVPAPASFK 23 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 CVACQNPDKPS(0.021)PS(0.025)T(0.477)S(0.477)VPAPAS(0.001)FK 79.382 2.8045e-05 3929900.0 2325.2 1935.7 2598.6 2163.8 2416.8 2614.1 2556.5 2590.9 1870.3 1684.2 2318.6 True False 2561.2525922782315 2098.8282323397407 2774.9566226512266 2297.4530116536516 2247.0523055073745 2592.8116363020927 2653.7890064704793 2539.222466978271 1791.6977951434492 1577.8593245726292 2033.426898816381 1.2595744620911073 1.032163110245777 1.3646699688424875 1.1298429331248423 1.1050568411460184 1.2750945892430747 1.3050820799189777 1.248740472773476 0.8811223045128214 0.7759606826737028 1.0 10.989697411871896 -8.758010276079569 24.999994574059183 0.9438633039229039 1.2124194475887415 0.6436670905221684 0.10675146803302815 41.3188805015862 301236.09056133573 0.01633582859346755 0.01816028592762921 1.7457808445551924e-09 8.758010276079569 0.2685561436658377 CVGAELEYDS(ph)EHSDWHGFD ddPTM_A549_PD325901_60min_R1 1 CVGAELEYDSEHSDWHGFD 19 0 H7BYU9;Q9GZN8;Q9GZN8-2 H7BYU9 C20orf27 UPF0687 protein C20orf27 1 CVGAELEYDS(0.999)EHS(0.001)DWHGFD 108.45 3.0991e-10 5692500.0 1511.1 1876.6 1672.3 2050.1 2204.3 1834.7 1242.4 2029.2 1940.5 2360.3 2534.5 True False 1664.505759586975 2034.7476679282734 1785.792334356824 2176.7300208850847 2049.477572422172 1819.758811492846 1289.6802118673672 1988.7260141233944 1858.9475332705258 2211.2702551886828 2222.772567519243 0.748842137027393 0.9154097444162642 0.8034075822475546 0.9792859839522203 0.9220365602718955 0.8186887125045879 0.5802124026151417 0.8947051278138368 0.836319271001815 0.9948252410081715 1.0 11.118144625065751 -10.505177157407807 0.8220984570126334 0.9999453829253324 0.8357415995383195 0.279550767221155 0.10112397784164558 0.6961772628335714 0.8454002642332362 0.0684776827064206 0.019546345378882626 3.124804436861186e-11 10.505177157407807 -0.1642037833870129 CVS(ph)VQTDPTDEIPTKK ddPTM_A549_PD325901_60min_R1 1 CVSVQTDPTDEIPTKK 16 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 CVS(0.712)VQT(0.209)DPT(0.079)DEIPT(0.001)KK 58.913999999999994 0.0053018 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 CY(ph)IAS(ph)AGADALAK ddPTM_A549_PD325901_60min_R1 1 CYIASAGADALAK 13 0 O43815-2;O43815 O43815-2 STRN Striatin 2 CY(1)IAS(1)AGADALAK 56.086999999999996 0.059539999999999996 12149000.0 5117.6 5877.9 5477.0 6815.8 6468.5 7975.5 5623.1 6271.1 6534.7 5809.7 6833.2 True False 5637.134984622003 6373.251261491847 5848.702155876537 7236.796486195096 6014.17487511356 7910.550172268601 5837.090147578386 6146.01799091722 6260.069284031382 5442.874550510395 5992.75971922371 0.940657601628691 1.0634918735432672 0.9759613984046346 1.2075899627646902 1.0035735048447136 1.320017912096986 0.9740237254722621 1.025573905658504 1.0446054200955515 0.9082417459606497 1.0 12.549004814613511 CYDS(ph)PPSSPEMNNSSINNQLLPVDAIR ddPTM_A549_PD325901_60min_R1 1 CYDSPPSSPEMNNSSINNQLLPVDAIR 27 0 C9JGI8;C9J4Q3;Q9NZW5 C9JGI8 MPP6 MAGUK p55 subfamily member 6 1 CY(0.06)DS(0.603)PPS(0.108)S(0.108)PEMNNS(0.06)S(0.06)INNQLLPVDAIR 40.328 0.022522 1702100.0 628.41 654.55 611.82 569.42 785.93 545.83 377.47 818.56 462.86 646.15 921.4 True False 692.2057205890088 709.711225643425 653.3417843725365 604.5917801533511 730.7289881113088 541.3849414493598 391.83482740950984 802.2331786521024 443.40760383900783 605.3519787273514 808.0736412358374 0.8566121764971513 0.8782754311327609 0.8085176288801355 0.7481889636057318 0.904285142866137 0.6699698069861381 0.4848998994822457 0.9927723634509316 0.5487217763481024 0.7491297176845775 1.0 9.658342964193123 -5.926314190189513 3.8222509926844626 0.7737575447615405 0.8669751691888092 0.06122673371247256 0.1545178720360756 0.7006058077841502 20.163730549287767 0.026143662278582447 0.08937948991728273 1.1849112144138337e-06 5.926314190189513 0.09321762442726877 CYFKHT(ph)LQQK ddPTM_A549_PD325901_60min_R1 2 CYFKHTLQQK 10 1 Q9P109 Q9P109 GCNT4 Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 1 CY(0.462)FKHT(0.538)LQQK;CY(0.454)FKHT(0.546)LQQK 60.563 0.0044702 26831000.0 6730.6 6744.9 5826.5 5588.8 6660.2 8417.3 5658.5 7110.9 7329.8 8082.5 7704.4 True False 7413.8855571941585 7313.3163942286055 6221.921327590764 5934.0074829142795 6192.410528442655 8348.752299546917 5873.83731395001 6969.067521106862 7021.75399606611 7572.169570631917 6756.807642215526 1.097246799046536 1.0823626750206852 0.9208374216127048 0.8782264935055256 0.9164698562311286 1.2356060349247118 0.8693213755636834 1.0314142254938807 1.0392117650642054 1.1206726566140688 1.0 12.722126068659767 DAAAEGTVGRS(ph)PGPGPDLYSAPIFSSNYSSR ddPTM_A549_MK2206_60min_R1 1 DAAAEGTVGRSPGPGPDLYSAPIFSSNYSSR 31 1 Q8NEA6-2;Q8NEA6 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 DAAAEGT(0.042)VGRS(0.696)PGPGPDLY(0.163)S(0.071)APIFS(0.005)S(0.006)NY(0.003)S(0.007)S(0.007)R 60.268 0.00037425 5512400.0 1764.7 1893.1 1618.7 1734.1 2715.5 1253.1 1558.0 1783.5 2644.6 2254.6 1890.2 True False 2062.538217227308 1989.4507039161301 1848.2560002094815 2158.954577846707 2316.053547201099 1385.7022102595397 1841.0684329213454 2036.3165867396785 2045.602322558399 1745.2842941122956 1420.8111731339075 1.4516624420104554 1.400221747642908 1.3008456261874346 1.5195225225352527 1.6300924366272682 0.9752894941015087 1.2957868489029893 1.4332070476671015 1.43974256483807 1.2283717408152783 1.0 10.472499116734069 -10.794050129696657 0.8177277924838394 0.9743562638637362 1.383490566892079 0.23152820132722618 0.17033058148252483 0.5579012467237965 0.5931363085896414 0.15021864087674414 0.029498330313081005 1.6067557778757974e-11 10.794050129696657 0.40913430302834275 DAAS(ph)PHQDGAPGPGPR ddPTM_A549_MK2206_60min_R1 1 DAASPHQDGAPGPGPR 16 0 A0A1B0GUL3 A0A1B0GUL3 1 DAAS(1)PHQDGAPGPGPR 52.045 0.0055902999999999994 3690400.0 357.91 480.53 387.11 657.62 509.14 251.33 270.16 215.51 498.97 443.74 363.98 True False 418.31645794062763 504.9869244904219 442.00801892944503 818.7369295216832 434.2461804536795 277.9255737806481 319.24457499231744 246.05920247169496 385.9540916913578 343.49882580918546 273.5937206630409 1.528969513360388 1.845754804849362 1.6155634634386358 2.99252821862108 1.5871935196513474 1.0158331598660566 1.1668563672391454 0.8993598313418253 1.4106832962248441 1.2555069793880245 1.0 8.095891308623353 -7.000370850513604 24.999998131807335 1.166153778846673 1.9993429891710695 0.5375370900426725 0.3775164910991585 8.375426159321645 564695.721472362 0.05406008424038327 0.10136652356774614 9.991464496171918e-08 7.000370850513604 0.8331892103243965 DAAS(ph)PHQDGAPGPGPR ddPTM_A549_PD325901_60min_R1 1 DAASPHQDGAPGPGPR 16 0 A0A1B0GUL3 A0A1B0GUL3 1 DAAS(1)PHQDGAPGPGPR 58.672 0.002003 5845200.0 363.18 743.7 703.89 523.66 432.99 712.37 482.84 610.21 747.54 543.91 593.69 True False 400.04976624101477 806.3742090153768 751.6602082344226 556.0052888818514 402.57827613440855 706.5686949055205 501.21474042018616 598.0388828495159 716.1234934403756 509.56742977573856 520.6698937109879 0.7683366583570382 1.5487244773614217 1.4436406201193805 1.0678652551216592 0.7731929212674444 1.3570377381906409 0.9626343801979054 1.148595088890378 1.375388709987291 0.9786765778675651 1.0 9.024225179084866 -11.214420785185995 1.6736915967494408 1.0001019299060683 1.1989934751893643 0.04740462992976113 0.2489368755470845 0.8411249936430474 4.248181580952871 0.18040226397290793 0.03752758514854855 6.103503736984851e-12 11.214420785185995 0.198891545283296 DADAGDEDEES(ph)EEPR ddPTM_A549_PD325901_60min_R1 1 DADAGDEDEESEEPR 15 0 Q9NZT2-2;Q9NZT2;A0A087X028 Q9NZT2-2 OGFR Opioid growth factor receptor 1 DADAGDEDEES(1)EEPR 58.751999999999995 0.0079241 633700.0 186.35 0.0 130.06 276.13 159.43 183.13 0.0 0.0 0.0 150.64 0.0 True False 205.26811481638057 0.0 138.88665371431483 293.18592296326943 148.23218680364153 181.63864999655794 0.0 0.0 0.0 141.12856469161676 0.0 0.0 DADLS(ph)PVNASIIK ddPTM_A549_MK2206_60min_R1 2 DADLSPVNASIIK 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 DADLS(1)PVNASIIK;DADLS(1)PVNASIIK 191.49 1.0257999999999999e-25 10009800.0 4987.299999999999 5046.200000000001 4960.4 4542.0 7001.200000000001 5170.5 5072.3 6720.8 6923.6 6010.3 6421.6 True False 5829.034312221766 5303.030025937126 5663.8593089757915 5654.790203898131 5971.332754433559 5717.638878099874 5993.87125308533 7673.493981586779 5355.415654717289 4652.569055665364 4826.939492856158 1.207604595178519 1.0986319662356612 1.1733851889708313 1.1715063369381753 1.2370846502781103 1.1845267351210733 1.2417539647961662 1.5897224303191506 1.1094847289143095 0.9638755701311648 1.0 12.236893026940049 -8.984886741969172 20.6175146913632 1.0483001225955548 1.2349604583355511 0.38073445981763143 0.12249765463786125 11.46080339150892 15636.455477921232 0.02234349699546569 0.022600211858096995 1.035412152729572e-09 8.984886741969172 0.1866603357399963 DADLS(ph)PVNASIIK ddPTM_A549_PD325901_60min_R1 2 DADLSPVNASIIK 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 DADLS(1)PVNASIIK;DADLS(1)PVNASIIK 163.8 7.4511999999999995e-19 13359200.0 9308.6 10353.4 9756.2 10122.2 10866.3 10127.9 10739.8 10829.599999999999 10286.2 11094.900000000001 11473.7 True False 10253.602219370861 11225.917353260462 10418.314400796538 10747.425304815863 10103.088574699923 10045.421740294545 11148.508966044064 10613.595132343147 9853.906785224046 10394.366120532519 10062.50763777689 1.018990751458072 1.1156182690600775 1.0353596514733436 1.0680663003392554 1.0040328850803237 0.9983020238992714 1.1079255159211094 1.054766417517772 0.9792694962267945 1.0329796999616436 1.0 13.296702257830484 -8.757171198657767 24.974581346457487 0.9902105939770236 1.051283008279837 0.20349142667862663 0.0381645393987601 81.50718371589379 476926.1193971995 0.006019987929787234 0.006708685879193848 1.7491570359139189e-09 8.757171198657767 0.061072414302813405 DADLS(ph)PVNASIIKENYEKDEDFLSSTR ddPTM_A549_PD325901_60min_R1 2 DADLSPVNASIIKENYEKDEDFLSSTR 27 2 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 DADLS(0.999)PVNASIIKENYEKDEDFLSSTR;DADLS(0.999)PVNAS(0.001)IIKENYEKDEDFLSSTR 62.663000000000004 0.00012044 22346400.0 2635.3999999999996 2366.7 2462.58 2344.43 2827.7 2486.8 2453.1 2591.7 2747.3 2872.7 3411.2 True False 2902.94386792106 2566.150114934373 2629.7054874965197 2489.2401165131546 2629.0921070354193 2466.548325295912 2546.454062887827 2540.0065103506813 2631.8405349930995 2691.3172317419508 2991.644025378433 0.9703506979089356 0.8577725468556586 0.8790168433103838 0.8320642748257036 0.8788118120780923 0.8244792175713158 0.8511888584624333 0.8490336713872162 0.8797305136128889 0.8996114540738208 1.0 11.546722804348088 -10.34685746499264 0.7300069664005949 1.0005529752663889 0.8652177167958035 0.21797778269759072 0.04652943407199282 0.325571442296563 0.31696881994500775 0.024101122358114752 0.007328905881097429 4.4992749641089016e-11 10.34685746499264 -0.13533525847058536 DADS(ph)DENDKGEK ddPTM_A549_MK2206_60min_R1 1 DADSDENDKGEK 12 1 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 DADS(1)DENDKGEK 81.44800000000001 0.00020449999999999998 11021000.0 4235.7 3823.1 3242.5 2193.6 410.42 512.76 470.31 723.17 632.05 5739.2 6037.7 True False 4950.582607077523 4017.6794602196132 3702.3352571070886 2731.0320984744444 350.04776168008635 567.019922857459 555.7592392087538 825.6815621152415 488.89168417644896 4442.710733952493 4538.372457957148 1.0908277478190767 0.8852687824630608 0.8157847976130227 0.6017646466380506 0.07713068174172133 0.12493904546404087 0.12245782917934352 0.1819334066924301 0.10772401091040315 0.9789215792906263 1.0 12.14795929851976 -6.18981983500795 2.3086611338803578 0.4389414056453878 0.9756271881471487 0.35824077658697917 0.32248005026472715 0.3628506780518843 3.7246043654842502 0.05830106837712746 0.18943347614911105 6.459221311736743e-07 6.18981983500795 0.5366857825017608 DADS(ph)DENDKGEK ddPTM_A549_PD325901_60min_R1 2 DADSDENDKGEK 12 1 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 DADS(1)DENDKGEK;DADS(1)DENDKGEK 120.66 4.0705e-06 47230000.0 12522.7 12486.5 10858.5 10034.7 12721.900000000001 9125.400000000001 7281.2 8999.9 10292.3 13132.599999999999 13467.599999999999 True False 13793.995285275501 13538.781176375564 11595.423107464927 10654.520628542783 11828.357632172401 9051.085767916735 7558.290050425526 8820.389934215033 9859.75042343737 12303.405394776468 11811.17057815038 1.1678770697625154 1.1462692107267598 0.981733608090923 0.9020715227204239 1.001455152468445 0.7663157269661689 0.6399272621130113 0.7467837227354901 0.8347818159257674 1.0416753626043365 1.0 13.52786433358205 -5.870684036746452 1.3673821279087837 0.8780250176300717 1.1988805231493003 0.48630290019147726 0.11493269525434746 0.42252932244215136 1.2808167097379912 0.01877540568718325 0.1369676161817564 1.3468398671751042e-06 5.870684036746452 0.3208555055192286 DADS(ph)QNPDAPEGK ddPTM_A549_MK2206_60min_R1 2 DADSQNPDAPEGK 13 0 A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2;A0A3B3IU89 A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin 1 DADS(1)QNPDAPEGK;DADS(1)QNPDAPEGK 95.264 0.00017003 3864400.0 1862.46 1816.37 1830.32 1446.6799999999998 2029.4099999999999 1991.83 1599.3 2095.75 2734.2 2323.48 2139.19 True False 2176.797715224781 1908.8154746564567 2089.8868983155735 1801.1166649439338 1730.8864773431706 2202.604128530252 1889.872108325487 2392.8289804651968 2114.9080656201972 1798.6042542730572 1607.9700843594994 1.3537551080074115 1.1870963852022114 1.2997050869562883 1.1201182674125247 1.0764419650460302 1.3698041710817104 1.1753154655724067 1.4881054092609747 1.3152658038800678 1.118555793896808 1.0 10.651024850664207 -10.752788712305602 1.0582426617927267 1.0033013685408771 1.2623663743806564 0.293969437242953 0.11865512646260322 0.39672400518139495 0.8046470954574495 0.07391775090158846 0.019892475356079374 1.766897221065183e-11 10.752788712305602 0.2590650058397792 DADS(ph)QNPDAPEGK ddPTM_A549_PD325901_60min_R1 2 DADSQNPDAPEGK 13 0 A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2;A0A3B3IU89 A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin 1 DADS(1)QNPDAPEGK;DADS(1)QNPDAPEGK 117.2 1.5638e-05 4537600.0 2611.1000000000004 2871.8999999999996 2305.54 2878.1 2549.1000000000004 2782.6000000000004 2431.9 2518.7 2907.2 2789.0 3093.2 True False 2876.176949809776 3113.925091933927 2462.0078087382844 3055.873700360649 2370.060009917597 2759.939428168091 2524.447285286742 2468.4625526180735 2785.020494060328 2612.902064026282 2712.7560094103474 1.060241665609636 1.1478824786055046 0.9075669909854641 1.1264830636297742 0.873672383987368 1.017393167168027 0.930583980472119 0.9099463954941623 1.026638770460484 0.9631909596595936 1.0 11.405543579298746 -6.729900730973589 24.999759099304473 0.9910039169152768 1.0558550633281123 0.23282555247526948 0.075241624510698 299.468009544834 237378.2171517543 0.010273820339060696 0.021385118327701094 1.8625128125861515e-07 6.729900730973589 0.06485114641283551 DAEGILEDLQSYR ddPTM_A549_MK2206_60min_R1 1 DAEGILEDLQSYR 13 0 Q9NUQ9;E5RK61;E5RFS4;E5RHU5;E5RGI7;E5RJE1;E5RIR8;E5RJL8;E5RI16 Q9NUQ9 FAM49B Protein FAM49B 0 61.353 0.021109 379270.0 751.77 711.18 728.22 551.06 926.14 750.23 684.83 828.43 1350.8 991.32 984.73 False True 878.6503969881418 747.3760243046187 831.4925461620743 686.0697247380234 789.9060328502399 829.6188406376305 809.2547464168972 945.8624894604714 1044.8459567843483 767.3801234983595 740.194363834596 1.1870536171557302 1.0097023982090567 1.1233435254147381 0.9268778016409387 1.0671602911944793 1.1208121557961732 1.0933003356368889 1.2778569193102287 1.4115832379099686 1.036727866344357 1.0 9.531760340140181 -8.106449115039265 5.512182706976943 1.2059091228180958 1.0681808115925897 0.14029039456764159 0.12133079077739632 0.3533993027805453 15.379190409341906 0.025608788099042535 0.03328077939159341 7.826198968828105e-09 8.106449115039265 -0.1377283112255061 DAEKTPAVSISCLELS(ph)NNLEK ddPTM_A549_MK2206_60min_R1 1 DAEKTPAVSISCLELSNNLEK 21 1 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 DAEKTPAVS(0.004)IS(0.112)CLELS(0.883)NNLEK 50.883 0.0032803000000000003 1227500.0 721.37 1090.4 784.39 673.55 1220.9 682.51 449.54 330.6 965.37 1229.0 1193.3 True False 843.1196201967829 1145.8967025250367 895.6282967840338 838.5697802368088 1041.3072273164505 754.7327551865287 531.2155990599882 377.46356242003804 746.7152363791126 951.3680464224302 896.9706765954356 0.9399634148542613 1.2775185771673507 0.998503429547444 0.9348909636820072 1.1609155733706504 0.8414241121585059 0.5922329602527069 0.4208204039096888 0.8324856718988448 1.0606456501270103 1.0 9.808917011684207 -7.278395690400897 23.445804051613027 0.8450255643156105 1.0636827075356834 0.3108648962034827 0.19208321470797365 453.19994277474376 626646.7878858746 0.03151736377226764 0.05048035996370341 5.267497153585715e-08 7.278395690400897 0.2186571432200729 DAELQDQEFGKRDS(ph)LGTYSSR ddPTM_A549_MK2206_60min_R1 4 DAELQDQEFGKRDSLGTYSSR 21 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DAELQDQEFGKRDS(1)LGTYSSR;DAELQDQEFGKRDS(1)LGTYSSR;DAELQDQEFGKRDS(0.954)LGT(0.045)YS(0.001)SR;DAELQDQEFGKRDS(0.998)LGT(0.002)YSSR 243.19 5.781199999999998e-87 654220000.0 25605.5 28434.7 28504.5 25844.199999999997 38068.5 27524.5 26540.2 22740.5 43107.9 42566.200000000004 44634.9 True False 29927.0824056292 29881.90477557654 32546.866718954207 32176.030160190225 32468.67407903703 30437.124320715597 31362.210798086715 25964.035514860483 33344.02947917084 32950.46585649018 33550.82246942902 0.8919925117453763 0.8906459685989654 0.9700765681261734 0.9590235884532642 0.9677459951577037 0.9071945806529609 0.9347672721484985 0.7738718041418657 0.9938364256063585 0.9821060537789833 1.0 15.034060512831019 -8.945742544409185 24.999999713055246 0.997281815266463 0.9150973802006848 0.31932122307490474 0.051775319554865445 73.51481719210612 33873.11033370909 0.008866259183054748 0.009438348853299586 1.1330718643690678e-09 8.945742544409185 -0.08218443506577822 DAELQDQEFGKRDS(ph)LGTYSSR ddPTM_A549_PD325901_60min_R1 4 DAELQDQEFGKRDSLGTYSSR 21 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DAELQDQEFGKRDS(0.999)LGT(0.001)YSSR;DAELQDQEFGKRDS(1)LGTYSSR;DAELQDQEFGKRDS(1)LGTYSSR;DAELQDQEFGKRDS(0.994)LGT(0.006)YSSR 211.18 8.397199999999998e-68 1285651000.0 53341.2 49132.4 52358.8 57294.4 64795.3 68547.8 61263.4 66543.7 66639.8 68085.6 66839.1 True False 58756.35935628402 53272.9597781728 55912.18302704191 60833.34496297667 60244.30165964994 67989.56944375069 63594.81221161879 65216.43370097721 63839.160952146856 63786.66359643887 58618.31442796427 1.0023549794917659 0.9088108434717899 0.9538347114322451 1.0377873460987084 1.027738553173238 1.1598690632311288 1.084896637377216 1.1125607131047983 1.0890651083220493 1.0881695289076583 1.0 15.839063863418264 -6.3483881109159235 2.780218969793855 1.0595235858556078 0.9486429181995918 0.5518473058763453 0.046959635189647325 0.202473335547848 3.027172103304464 0.007901260738740576 0.0212110709558934 4.483445439780803e-07 6.3483881109159235 -0.11088066765601601 DAEPPS(ph)PTPAGPPR ddPTM_A549_MK2206_60min_R1 2 DAEPPSPTPAGPPR 14 0 O43306-2;O43306 O43306-2 ADCY6 Adenylate cyclase type 6 1 DAEPPS(0.5)PT(0.5)PAGPPR;DAEPPS(0.812)PT(0.188)PAGPPR 158.52 4.6605e-19 88472000.0 5184.5 5374.2 4403.3 4064.2 6022.5 4999.8 4611.3 4790.5 6575.4 7188.2 7473.0 True False 6059.516851144658 5647.72382493585 5027.754151925877 5059.929182448869 5136.598227957511 5528.875517401363 5449.113520365983 5469.568045290956 5086.082398756143 5564.380627578285 5617.247855692358 1.0787341073091723 1.0054254271889762 0.8950564904895366 0.9007843898718626 0.9144332527097286 0.9842676804440024 0.970068200719327 0.973709579104339 0.9054402670877436 0.9905884110026411 1.0 12.455647746522738 -5.470352506722612 3.978031930348128 0.9491800952377374 1.071250641454345 0.5244245913281704 0.0372192569907613 0.15668810744071082 4.828594651472943 0.005969848667318578 0.03817900597581948 3.385692358126834e-06 5.470352506722612 0.12207054621660762 DAEPPS(ph)PTPAGPPR ddPTM_A549_PD325901_60min_R1 2 DAEPPSPTPAGPPR 14 0 O43306-2;O43306 O43306-2 ADCY6 Adenylate cyclase type 6 1 DAEPPS(0.776)PT(0.224)PAGPPR;DAEPPS(0.866)PT(0.134)PAGPPR 131.08 9.0762e-09 91905000.0 3774.1 3908.6 3548.6499999999996 4336.6 4188.2 4250.200000000001 4154.1 3886.9 4373.29 4336.5 4703.5 True False 4157.243853654427 4237.991439232895 3789.4827287659778 4604.46193286682 3894.035280505622 4215.587780349321 4312.1865487107425 3809.372730285938 4189.495829825638 4062.692649928281 4124.9993179430885 1.0078168584346376 1.0273920339327836 0.9186626315990727 1.1162333804124875 0.9440087089389785 1.0219608430023703 1.045378730113583 0.9234844509466401 1.0156355206174217 0.9848953507110211 1.0 12.010178165475036 DAEQSGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 DAEQSGSPR 9 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 DAEQS(0.022)GS(0.978)PR;DAEQS(0.199)GS(0.801)PR 80.979 0.0016297 154243000.0 3251.2 2654.0 2057.38 1787.35 691.48 104.14 99.84899999999999 503.56 451.15999999999997 3632.3 3735.8 True False 3799.9230757915934 2789.0772638494564 2349.147420591205 2225.250830237191 589.7642079980169 115.16002567746273 117.9902708336094 574.9411720878228 348.9729803544762 2811.7609072580913 2808.097757165196 1.3532018485095958 0.9932265558536177 0.8365618378480861 0.7924406565117609 0.21002267691470614 0.04100997744242279 0.04201786441819668 0.2047440017430988 0.12427380046297536 1.0013044952169305 1.0 11.455377445134523 -5.935577913124468 1.303214607173072 0.4499209624334106 1.2943476911461478 0.45073071565078804 0.3384797529421827 0.5270583721686116 1.4581688279791627 0.0617863859737376 0.42453070041689256 1.159904108829468e-06 5.935577913124468 0.8444267287127372 DAEQSGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 DAEQSGSPR 9 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 DAEQSGS(1)PR;DAEQSGS(1)PR 131.42 4.870100000000001e-05 371870000.0 4211.7 4056.0 3784.3 3287.6000000000004 4291.2 3425.1000000000004 2424.0 3556.5 4181.799999999999 4329.700000000001 5228.4 True False 4639.268683510334 4397.81335453324 4041.1253548445466 3490.66758531867 3989.8009158363293 3397.207121188284 2516.2466464636973 3485.5628174797253 4006.0534886012247 4056.322003088774 4585.33994555834 1.0117611210057027 0.9591030123716889 0.8813142324941566 0.7612669129799108 0.8701210735097429 0.740884462553107 0.5487590181620227 0.7601536328524713 0.8736655375969997 0.8846284138688545 1.0 12.162812980225237 -9.719799687343086 1.161324897027459 0.9755403923676366 0.8164856931714999 0.11542647480974622 0.12097916392028074 0.4758236830937597 1.3116512013152528 0.03677895948251711 0.02480073857930496 1.9063397895443594e-10 9.719799687343086 -0.15905469919613668 DAERPPS(ph)PR ddPTM_A549_MK2206_60min_R1 1 DAERPPSPR 9 1 A6NKF1;A6NKF1-2 A6NKF1 SAC3D1 SAC3 domain-containing protein 1 1 DAERPPS(1)PR 49.423 0.0084379 8641300.0 241.81 346.44 217.27 309.41 555.91 391.24 181.72 373.2 530.27 589.77 441.94 True False 282.6216163131045 364.072316235119 248.08215306450504 385.2154638899427 474.13637540952396 432.64075711590687 214.73617177822015 426.1022428770661 410.164691667187 456.54054738694595 332.19410107649975 0.8507725314725579 1.0959626166007028 0.7467987910097631 1.1596095856055941 1.427287160949125 1.3023733886721716 0.6464177752776211 1.2826905760705865 1.2347139528908484 1.3743186465608277 1.0 8.375882644702825 -6.290051228410969 24.43799381271388 1.1310492163998984 0.9176563989099656 0.22413600130664213 0.21916090488882095 695.0252925537658 593634.9559582308 0.02944075524348502 0.06842773063308266 5.128008915712482e-07 6.290051228410969 -0.21339281748993277 DAERPPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 DAERPPSPR 9 1 A6NKF1;A6NKF1-2 A6NKF1 SAC3D1 SAC3 domain-containing protein 1 1 DAERPPS(1)PR 84.71799999999999 0.0003711 11787000.0 886.9 750.12 794.09 799.63 994.13 688.44 969.97 896.43 1151.4 1129.1 863.91 True False 976.9374350987282 813.3352449463694 847.9817226510863 849.0213290085071 924.3057383623163 682.8335728915544 1006.8827391379501 878.5500004142696 1103.0106621013558 1057.8084333065888 757.6545467767011 1.2894233120555074 1.0734908784043484 1.1192194731209166 1.120591610807998 1.2199566970126443 0.9012465849991154 1.3289470028544585 1.1595654037211227 1.4558226658757707 1.3961619286874685 1.0 9.565396390078652 DAEYIYPS(ph)LESDDDDPALK ddPTM_A549_PD325901_60min_R1 1 DAEYIYPSLESDDDDPALK 19 0 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 DAEY(0.004)IY(0.058)PS(0.469)LES(0.469)DDDDPALK 42.903999999999996 0.020648 4249700.0 341.63 672.89 576.09 577.11 763.51 607.91 514.21 769.93 627.93 562.47 985.54 True False 376.3120261052864 729.5968018076605 615.186931710592 612.7567739880942 709.8836915665077 602.9593825119181 533.7785429365088 754.5731421515999 601.5402857853961 526.9555482082692 864.3248278527968 0.43538264085290873 0.8441233877547691 0.7117543218547513 0.7089426963591202 0.8213158626138736 0.697607384494349 0.6175670601324166 0.8730203250393164 0.6959655287003331 0.6096730433133121 1.0 9.755429793207766 -12.211750301347914 0.33112859617955065 1.3702132056013605 0.6973445388913173 0.0 0.16350755325358232 5.025815895458837 0.3218828160106242 1.4221813058671688 0.03624794059044122 6.14114990564207e-13 12.211750301347914 -0.6728686667100432 DAEYIYPSLES(ph)DDDDPALK ddPTM_A549_PD325901_60min_R1 1 DAEYIYPSLESDDDDPALK 19 0 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 DAEYIYPSLES(1)DDDDPALK 93.73 1.0526999999999999e-06 4122000.0 1707.7 2007.9 2064.4 1923.2 1972.3 1795.6 2370.7 2191.2 2350.1 2065.1 2047.7 True False 1881.0644468577036 2177.112779725664 2204.502598245668 2041.9916960958951 1833.7724520656222 1780.9772289292825 2460.9182857968162 2147.4947970368544 2251.3334696928932 1934.7092335678285 1795.8458814397918 1.0474531619325758 1.2123049100294716 1.2275566745617625 1.1370639970835135 1.0211190564946606 0.9917205297714141 1.3703393544126474 1.1958124130981294 1.2536340077734962 1.0773247601941793 1.0 10.810447828714944 -10.991070887953551 1.2926153860952108 1.000850870806343 1.1719366541488085 0.14704842869058854 0.10791842033899482 0.5140425923856924 1.5406993580010524 0.07599633754371217 0.017768980941672938 1.0207728539034075e-11 10.991070887953551 0.1710857833424655 DAFGYAT(ph)LKR ddPTM_A549_MK2206_60min_R1 2 DAFGYATLKR 10 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 DAFGYAT(1)LKR;DAFGYAT(1)LKR 92.85600000000001 0.00037748 42521000.0 5062.200000000001 4395.2 4060.5 4918.8 5922.2 4435.3 4852.299999999999 4422.7 7398.799999999999 6540.7 6022.299999999999 True False 5916.57560109258 4618.896906582945 4636.339957280906 6123.906220813326 5051.0522250909 4904.6405020861375 5733.900100811456 5049.6312689507 5722.98361345575 5063.151327286563 4526.7967029755255 1.3070115556997586 1.020345557720072 1.0241988455618907 1.3528122914793146 1.1158115896326366 1.0834682500458326 1.2666573025120578 1.1154976908133534 1.2642457766424444 1.1184843631167454 1.0 12.144274801719488 -11.012157263253263 1.2968468395452803 1.0000312642256868 1.1762380729280553 0.10035790126671096 0.11271113031462134 0.48489577564357383 1.452556075819508 0.07478179074634482 0.016966790829497657 9.723950440803462e-12 11.012157263253263 0.1762068087023685 DAFGYAT(ph)LKR ddPTM_A549_PD325901_60min_R1 2 DAFGYATLKR 10 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 DAFGYAT(1)LKR;DAFGYAT(1)LKR 83.137 0.00061593 68037000.0 4808.8 4725.7 4917.3 5346.7 5441.2 5059.9 5525.0 5400.8 5833.0 5196.7 5637.4 True False 5296.985835948544 5123.95132384559 5251.017548127018 5676.953515763271 5059.028883120954 5018.6938520045005 5735.25689839601 5293.0768071543625 5587.859294803904 4868.579475125628 4944.035538422953 1.0713891101272657 1.0363904717157486 1.0620913841169486 1.148242861857361 1.023259004472019 1.015100683035414 1.1600355324762572 1.0705984546467775 1.1302223156321238 0.9847379609812849 1.0 12.271473398236552 -11.037154777322499 1.3501004785020048 1.0002545896605677 1.0844148266570186 0.33291450330561845 0.04672347070220648 0.439271795535004 1.4341695246345945 0.03325278611008722 0.007553375010846917 9.180053721199075e-12 11.037154777322499 0.08416023699645092 DAGDPS(ph)PPNK ddPTM_A549_MK2206_60min_R1 2 DAGDPSPPNK 10 0 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;A0A494C0S5;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 DAGDPS(1)PPNK;DAGDPS(1)PPNK 66.953 0.004820399999999999 137253000.0 10556.2 15030.900000000001 13952.599999999999 13915.5 19094.0 15703.4 15538.599999999999 15141.3 22628.0 20006.1 21366.0 True False 12337.82848568873 15795.908607835276 15931.28848367382 17324.798124690526 16285.297893668856 17365.12336492672 18361.762485103736 17287.625643286494 17502.79412949084 15486.708115160105 16060.232528398637 0.7682222822037142 0.9835417127307485 0.9919712218053623 1.0787389344491625 1.014013829804285 1.0812498096911547 1.1433061415913748 1.0764243676246599 1.0898219623247287 0.9642891588135855 1.0 13.971205160644965 -4.595958427993499 1.0620676097465969 1.0555128091474584 1.0828025773116069e-08 0.7415241363684962 0.048338120755603474 2.238026350942122 0.7279290215451444 0.007104051575794659 3.7620774781235498 2.5353713124397864e-05 4.595958427993499 -1.0555127983194326 DAGEGLLAVQITDPEGKPK ddPTM_A549_MK2206_60min_R1 2 DAGEGLLAVQITDPEGKPK 19 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 133.16 1.2471e-16 5609600.0 2574.6000000000004 3564.4 3110.2 3281.0 4288.5 3580.4 3194.3 3165.7 5050.799999999999 4611.0 4858.0 False True 3009.129537073399 3745.812735216655 3551.2731277269013 4084.845147289689 3657.6673309416 3959.2755515228296 3774.6629623110734 3614.447669549648 3906.801864470228 3569.37189752142 3651.624526020804 0.8240522856692676 1.025793508758823 0.9725186974786655 1.118637778386533 1.0016548264690788 1.0842504543689422 1.033694164176388 0.9898190911452586 1.0698804974692981 0.9774750585901517 1.0 11.83432271419661 -4.7440803049318 1.566340566468351 1.035434788416339 0.2878584387222165 0.618565426407266 0.045351726536529545 2.0896615020568983 1.5403052391131806 0.005826920001573722 3.591588686239531 1.8026843775842412e-05 4.7440803049318 -0.7475763496941226 DAGEGLLAVQITDPEGKPK ddPTM_A549_PD325901_60min_R1 2 DAGEGLLAVQITDPEGKPK 19 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 157.51 1.6957e-26 10360300.0 6055.799999999999 4801.0 5643.4 5891.5 6818.6 6825.1 5986.5 5920.700000000001 6292.8 6176.1 6417.2 False True 6670.58035795566 5205.597119110966 6026.395060521023 6255.4045744326995 6339.685058892995 6769.518648454692 6214.3195334384955 5802.606993800703 6028.33549980147 5786.1399919801825 5627.92508198244 1.1852645976598437 0.9249584959431071 1.0708022890735107 1.1114939312996734 1.1264693411056987 1.2028444852841085 1.1041937202279704 1.0310384216693822 1.0711470767620783 1.0281124762133491 1.0 12.458387408444102 -9.910519173206348 0.6353143396310483 1.0031004216071915 1.094267781135889 0.16437512935669185 0.07056465306150699 0.9401321900867653 0.7727707426053879 0.03995136877093375 0.01654168744468286 1.2287989364403606e-10 9.910519173206348 0.09116735952869748 DAGEGLLAVQITDQEGKPK ddPTM_A549_MK2206_60min_R1 2 DAGEGLLAVQITDQEGKPK 19 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 135.08 9.245799999999999e-17 5554000.0 3641.7 4537.6 3988.1000000000004 4050.3999999999996 5485.0 3873.0 4189.7 3738.6 6005.9 4728.7 5050.1 False True 4256.329928983219 4768.54445834337 4553.672548610267 5042.748181829365 4678.163765935563 4282.83828931067 4950.9142576447775 4268.5579989823145 4645.57323945152 3660.4833857752183 3796.0207943305218 1.1212609623583158 1.2561955575863397 1.1995910442354063 1.3284300732390273 1.2323862326893862 1.1282441591751093 1.3042379180427899 1.1244822487162194 1.2238007880225081 0.9642948719465043 1.0 11.890272180023047 -10.896239408114086 0.5166989132757469 0.9423886403412934 1.2235619685729735 0.6406021806790428 0.06656172801224784 0.8465899227811333 0.27467957221116657 0.12145735294477063 0.014327525569479768 1.2698738846529878e-11 10.896239408114086 0.28117332823168006 DAGEGLLAVQITDQEGKPK ddPTM_A549_PD325901_60min_R1 1 DAGEGLLAVQITDQEGKPK 19 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 157.51 1.6957e-26 4068900.0 2227.6 2380.6 2724.2 2323.1 2990.1 2897.8 2586.4 2415.2 3062.8 2757.3 2761.5 False True 2453.7443121275537 2581.221516716426 2909.0805939453808 2466.5926108570998 2780.0856912850045 2874.2012775625276 2684.8268673323873 2367.0269413122546 2934.081167173906 2583.2036074362372 2421.8530065908017 1.0131681425131762 1.0658043695021624 1.2011796694632761 1.0184732946816113 1.1479167743538987 1.1867777564289455 1.1085837414681783 0.9773619352085597 1.2115025805402446 1.0666227885863997 1.0 11.241895588547337 -5.5222024717920615 24.999711329609255 1.1037745720670598 1.0263271665130436 0.10379268222465543 0.07718531830065575 40.952416159770976 1513726.3746851087 0.012246007818175822 0.04859218322293559 3.004675170848828e-06 5.5222024717920615 -0.07744740555401619 DAGGGSVLKS(ph)PSQTPK ddPTM_A549_MK2206_60min_R1 2 DAGGGSVLKSPSQTPK 16 1 P35367 P35367 HRH1 Histamine H1 receptor 1 DAGGGS(0.001)VLKS(0.769)PS(0.208)QT(0.022)PK;DAGGGS(0.005)VLKS(0.694)PS(0.251)QT(0.051)PK 83.06299999999999 4.8628e-05 35163000.0 7414.7 7829.8 8235.8 6862.3 10942.2 7987.700000000001 7630.8 8048.2 11935.1 11629.3 11085.7 True False 8666.120087989637 8228.303376220223 9403.760280796476 8543.56380806035 9332.616875044689 8832.953112193862 9017.217585324905 9189.056996578789 9231.81890643831 9002.233053100374 8332.814740244716 1.0399991309221321 0.9874578558047453 1.1285214629072995 1.0252914620551667 1.11998372290353 1.0600203397699033 1.0821334526705306 1.1027554653529867 1.1078872138908482 1.0803351968960249 1.0 13.024588190320701 -5.728939019139955 24.99816496178767 1.0648045713915102 1.013728507722175 0.2222905159008759 0.04057157077625448 292.89350357111766 225279.94568144204 0.006654494092504844 0.025768833471477265 1.8666417743616612e-06 5.728939019139955 -0.05107606366933526 DAGGGSVLKS(ph)PSQTPK ddPTM_A549_PD325901_60min_R1 1 DAGGGSVLKSPSQTPK 16 1 P35367 P35367 HRH1 Histamine H1 receptor 1 DAGGGS(0.003)VLKS(0.715)PS(0.206)QT(0.077)PK 48.053000000000004 0.0070307 20111000.0 3076.0 2881.9 3238.0 2689.0 3026.0 3584.9 3207.4 3343.3 3217.4 3652.9 4021.6 True False 3388.273255568484 3124.7678270289284 3457.7501516757775 2855.0934228379074 2813.464199133283 3555.705762969807 3329.4593621566255 3276.615258731888 3082.1838668098876 3422.2552705921844 3526.9686950228406 0.9606757384464228 0.8859641514364767 0.9803744945497411 0.809503477268436 0.7977003603983116 1.0081478091902316 0.9440002591616606 0.929017392004572 0.873890338510625 0.9703106453486744 1.0 11.78421305528428 -7.278126445636863 24.942085781772864 0.9426362491158276 0.8876942551414724 0.2185081725378576 0.06134343946553676 1294.0005641215162 1934133.4585862448 0.010428967202941354 0.016700465774326063 5.270763798236588e-08 7.278126445636863 -0.054941993974355174 DAGGGSVLKSPS(ph)QTPK ddPTM_A549_PD325901_60min_R1 1 DAGGGSVLKSPSQTPK 16 1 P35367 P35367 HRH1 Histamine H1 receptor 1 DAGGGS(0.104)VLKS(0.384)PS(0.485)QT(0.027)PK 58.997 0.0016574 22047000.0 2014.5 2216.4 2338.5 2040.1 2580.0 2650.5 2398.2 2224.1 2219.6 2546.5 2675.5 True False 2219.0105570034825 2403.183806456476 2497.204672542867 2166.1123435967324 2398.789700516809 2628.9152067704727 2489.464813345393 2179.7385807273035 2126.3179308669196 2385.7135554115916 2346.430461391887 0.945696279312356 1.0241870986583268 1.0642568418846479 0.9231521578149854 1.0223144218362485 1.1203891400263435 1.0609582744117032 0.9289593774853643 0.9061926044062698 1.0167416399787113 1.0 11.196251990077638 -8.267780333742213 24.89336583556375 0.9524586250887543 1.0245062424822144 0.18779756393742453 0.05852443764229945 540.4143064992849 2121559.0823989725 0.01011016139339841 0.012374073180046087 5.397835761473938e-09 8.267780333742213 0.0720476173934601 DAGGPRPES(ph)PVPAGR ddPTM_A549_MK2206_60min_R1 4 DAGGPRPESPVPAGR 15 1 E9PS47;E9PLE4;Q9BVG9 E9PS47 PTDSS2 Phosphatidylserine synthase 2 1 DAGGPRPES(1)PVPAGR;DAGGPRPES(1)PVPAGR;DAGGPRPES(1)PVPAGR;DAGGPRPES(1)PVPAGR 132.65 1.7414000000000002e-09 947921000.0 5296.37 6011.8 5110.07 5745.0 7287.7 5717.400000000001 5165.68 5778.780000000001 8250.6 8617.0 8455.2 True False 6190.267772185755 6317.774941526058 5834.754765546717 7152.5252579028465 6215.688983957817 6322.411473097037 6104.217190355033 6597.9397617715285 6381.8522735008455 6670.413715233588 6355.540488351404 0.9739954900030038 0.9940578544193741 0.9180579962067433 1.1253999987903747 0.9779953404985917 0.9947873803471023 0.9604560306936912 1.0381398362364933 1.004139976009541 1.0495431076962363 1.0 12.633799104889503 DAGGPRPES(ph)PVPAGR ddPTM_A549_PD325901_60min_R1 4 DAGGPRPESPVPAGR 15 1 E9PS47;E9PLE4;Q9BVG9 E9PS47 PTDSS2 Phosphatidylserine synthase 2 1 DAGGPRPES(1)PVPAGR;DAGGPRPES(1)PVPAGR;DAGGPRPES(1)PVPAGR;DAGGPRPES(1)PVPAGR 119.77 5.3489e-07 1055892000.0 8886.9 9147.1 7681.300000000001 9318.699999999999 8634.300000000001 9393.0 8724.69 10099.0 9088.1 9233.3 9998.6 True False 9789.09154581 9917.958218750236 8202.599209409245 9894.294934696769 8027.856554717945 9316.506522239228 9056.712852283563 9897.567522487767 8706.158761719067 8650.307862235166 8768.835586347568 1.1163502211229615 1.1310462057461503 0.9354262750894873 1.1283476394632668 0.9154985830977065 1.0624565178008747 1.0328295887294543 1.1287208461175338 0.9928523206973929 0.9864830714471439 1.0 13.09816956458027 -2.000000005356438 0.5434217538653142 1.0093899757734641 6.402225912362072 0.14976978605023672 0.0700390436423053 123.83710266128185 1.0456764896578143 0.011382931501235453 781.3880288438654 0.00999999987666346 2.000000005356438 5.392835936588607 DAGGPRPESPVPAGRAS(ph)LEEPPDGPSAGQATGPGEGR ddPTM_A549_MK2206_60min_R1 1 DAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGR 37 2 E9PS47;E9PLE4;Q9BVG9 E9PS47 PTDSS2 Phosphatidylserine synthase 2 1 DAGGPRPES(0.061)PVPAGRAS(0.939)LEEPPDGPSAGQATGPGEGR 66.90100000000001 9.667299999999999e-05 6632300.0 1290.2 1453.0 1369.8 1280.4 1627.6 1337.4 1235.1 1233.7 1680.1 1980.4 1817.9 True False 1507.954217638506 1526.9514937352155 1564.0582375282324 1594.098057479341 1388.1821960686816 1478.9227803057288 1459.5016826066455 1408.580753047794 1299.5600325683915 1533.0262645524665 1366.4652585123974 1.1035437661109222 1.117446260871302 1.1446015387401394 1.1665851345644571 1.015892784262899 1.0822981199798363 1.0680854661431585 1.0308207576248558 0.9510377409691028 1.1218918702853782 1.0 10.416233065409395 -7.836320294808654 0.8345922997945302 0.976935097694679 1.1242704303995024 0.20325748775782226 0.05679761546398028 0.22631420317687712 0.3176473339320516 0.00784457881169916 0.013471704223878946 1.4577387725680821e-08 7.836320294808654 0.14733533270482335 DAGKGT(ph)PLTNTEDVLK ddPTM_A549_MK2206_60min_R1 2 DAGKGTPLTNTEDVLK 16 1 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 DAGKGT(0.948)PLT(0.041)NT(0.012)EDVLK;DAGKGT(0.971)PLT(0.017)NT(0.012)EDVLK 76.061 0.00018855 5173100.0 3374.0 4157.7 3283.5 3912.3 4131.0 3766.3999999999996 3256.3 3630.9 5624.8 5363.1 5581.9 True False 3943.4487136198454 4369.309171027465 3749.1496736194695 4870.813675629824 3523.3353723026075 4164.95794806602 3847.9275597700766 4145.591194164897 4350.7917809598775 4151.571985165287 4195.760177397187 0.9398651369216575 1.0413629440894159 0.8935567132307429 1.160889438311844 0.8397370734588281 0.992658724991695 0.9170990230802738 0.9880429335540784 1.0369495864892029 0.9894683703635052 1.0 12.034716502909081 -8.548860787041866 9.522726740404595 1.0172170046315019 0.9710386895631898 0.0421973625194062 0.07979353659014286 0.6329473129522017 219.28949339961287 0.012098581093580514 0.013758456798728143 2.8257856344404637e-09 8.548860787041866 -0.04617831506831205 DAGKGT(ph)PLTNTEDVLK ddPTM_A549_PD325901_60min_R1 1 DAGKGTPLTNTEDVLK 16 1 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 DAGKGT(0.983)PLT(0.016)NT(0.001)EDVLK 85.24799999999999 3.1773e-05 5926200.0 4322.2 4361.6 5165.4 4739.8 5711.5 4947.5 4391.6 6068.4 5654.2 5316.5 5359.8 True False 4760.986562164529 4729.16733903653 5515.955106073519 5032.566681133181 5310.343943605334 4907.209200338399 4558.724741175732 5947.361001432295 5416.573637010153 4980.815282680435 4700.578578571568 1.0128511804628353 1.006081966291403 1.1734630139402396 1.0706270721810802 1.1297213427754385 1.043958550700289 0.969822047429969 1.2652402043749271 1.1523206231893617 1.0596174916395136 1.0 12.198622628912547 DAGLLVEQPPLAGVAAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 DAGLLVEQPPLAGVAASPR 19 0 Q13469-3;Q13469-4;Q13469-2;Q13469 Q13469-3 NFATC2 Nuclear factor of activated T-cells, cytoplasmic 2 1 DAGLLVEQPPLAGVAAS(1)PR 92.977 3.8213999999999995e-06 1241100.0 563.29 478.6 773.45 649.02 890.46 805.89 953.6 749.9 849.29 1021.9 1381.7 True False 658.3595808817197 502.95869573411824 883.1368402804869 808.0299291356146 759.4745135852291 891.168744893513 1126.8567764016652 856.2006214724333 656.9271710374433 791.0520802596268 1038.5857570199555 0.6339000669244397 0.48427266822652404 0.8503263541900452 0.7780098308435487 0.7312583563291024 0.8580598557894434 1.0849915558586016 0.8243908754623738 0.6325208742727068 0.7616627465886069 1.0 10.020404630473324 -5.768953131943816 24.993619669538703 0.8340532923722513 0.559086351937646 0.4355787703131574 0.12143101680492698 129.70086544383852 431441.0377038837 0.02112869484675424 0.06758455709153328 1.7023422113171672e-06 5.768953131943816 -0.27496694043460534 DAGQISGLNVLR ddPTM_A549_PD325901_60min_R1 2 DAGQISGLNVLR 12 0 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 120.57 4.0991999999999996e-05 7974000.0 4034.0 4794.7 4438.200000000001 4992.4 5218.4 5079.9 4530.1 4899.4 4702.299999999999 5256.3 5475.200000000001 False True 4443.528710326161 5198.766196001111 4739.40294106468 5300.769209436952 4851.877586502682 5038.530978635476 4702.495434465836 4801.677623495052 4504.678683688735 4924.41632095423 4801.785110152442 0.9253909969713519 1.0826736467255333 0.9870085462683728 1.1039163743978266 1.0104320529138902 1.0493037199816544 0.9793223408776297 0.9999776152712118 0.9381258386937114 1.0255386711376375 1.0 12.229355126078326 -7.838597766037876 6.405459918362941 0.9730331888978456 1.0299318242286548 0.08846047708509486 0.049757353291056836 0.2217663864418944 14.662883296424047 0.00709710866473582 0.00986348945927703 1.4501142956281453e-08 7.838597766037876 0.05689863533080919 DAGS(ph)RDEKAEAGEAGQATAEAECHR ddPTM_A549_MK2206_60min_R1 1 DAGSRDEKAEAGEAGQATAEAECHR 25 2 O95671;O95671-2;O95671-3 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 DAGS(1)RDEKAEAGEAGQATAEAECHR 108.88 7.9508e-13 3085800.0 301.07 328.59 298.67 500.5 452.5 220.9 371.31 262.29 440.22 667.16 753.91 True False 351.88325554520657 345.3138274786334 341.0258970671317 623.1225224682985 385.9378494231253 244.27549137844747 438.7722206855103 299.47041072943665 340.51087288688603 516.448092637257 566.6933401425167 0.6209412227373486 0.6093486600562326 0.6017820802012032 1.0995762228502464 0.6810347362227098 0.43105410647143844 0.7742674734366285 0.5284523207103923 0.6008732567798513 0.911336089651903 1.0 9.146424437572751 -10.750927843026926 0.9805440999400477 1.0018613295320162 0.6617477263212342 0.3215881513570563 0.16353137296476103 0.4835249473395685 0.8187723303228411 0.11514590743551781 0.028820346778336618 1.7744842826517432e-11 10.750927843026926 -0.340113603210782 DAGS(ph)RDEKAEAGEAGQATAEAECHR ddPTM_A549_PD325901_60min_R1 1 DAGSRDEKAEAGEAGQATAEAECHR 25 2 O95671;O95671-2;O95671-3 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 DAGS(1)RDEKAEAGEAGQATAEAECHR 75.275 1.3082e-06 4943100.0 484.7 504.28 535.95 449.89 417.25 811.59 567.61 597.71 686.32 874.27 1187.7 True False 533.9063871827191 546.7774453708139 572.3227899291636 477.67868352567757 387.9437994343562 804.9806801218069 589.2107091581103 585.7882051555761 657.4763571420904 819.068442996148 1041.620429450623 0.512572883640843 0.5249296479901014 0.5494542673582363 0.4585918920365429 0.3724425793366664 0.7728157564520639 0.5656673894816703 0.562381639792276 0.6312053206261133 0.7863406091489059 1.0 10.024613934340165 -10.796895143945651 0.3175039100823961 1.2090480482354724 0.4924689906217189 0.5923075937641991 0.10789168307683815 1.1380391539687735 0.1396987081387543 0.29365075291976733 0.039120173855914396 1.5962645027965875e-11 10.796895143945651 -0.7165790576137535 DAGTIAGLNVLR ddPTM_A549_MK2206_60min_R1 2 DAGTIAGLNVLR 12 0 P11142;E9PKE3;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 155.11 2.7212e-13 34678000.0 4294.7 5209.799999999999 4492.299999999999 4444.3 6217.5 4314.6 4064.5 4366.9 6372.7 5826.299999999999 6579.0 False True 5019.54036466602 5474.956567145023 5129.3756902088435 5533.153699512209 5302.913986272444 4771.168108200314 4802.967038259829 4985.921448070369 4929.293625110757 4510.134783458913 4945.252728837149 1.0150220099764928 1.1071136031570283 1.0372322652587647 1.1188818859037972 1.0723241615842345 0.9647976291238466 0.9712278222409922 1.0082237898573048 0.9967728436540098 0.9120130013091259 1.0 12.271828536955494 -7.246470381560169 24.175536816093494 0.9948773030966226 1.073052761866173 0.5734636402268285 0.038671340598092484 239.1229697347441 386192.58543813095 0.003963143430277892 0.006844544467528106 5.6693023426738806e-08 7.246470381560169 0.07817545876955034 DAGTIAGLNVLR ddPTM_A549_PD325901_60min_R1 2 DAGTIAGLNVLR 12 0 P11142;E9PKE3;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 160.77 1.4922999999999999e-13 63467000.0 6458.2 6519.4 7256.9 7188.5 8083.8 6890.700000000001 6602.4 7303.2 7462.2 6901.0 7780.5 False True 7113.831709724437 7068.812717836294 7749.396873284721 7632.517318731985 7516.021775596041 6834.584423804306 6853.657944971908 7157.531946750435 7148.589684499516 6465.269682267971 6823.547824653172 1.0425414890509717 1.0359438959740255 1.1356844082321074 1.1185555542171248 1.1014829775855006 1.001617428269684 1.0044126781393616 1.0489458168506702 1.0476353164364118 0.9474938621972051 1.0 12.736306331560868 -7.257295871168603 24.85876312527394 1.0224108739919682 1.0884893812929286 0.48778576410765706 0.03859333565867178 236.1602957064057 1416826.6847166144 0.005202846535831398 0.008801543469438351 5.529732575766241e-08 7.257295871168603 0.06607850730096043 DAGVIAGLNVLR ddPTM_A549_MK2206_60min_R1 2 DAGVIAGLNVLR 12 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 0 ; 130.41 2.0138e-07 12132100.0 2603.3999999999996 2554.3999999999996 2679.6 2015.5700000000002 3958.6 2461.2 2180.63 2234.1000000000004 3167.1000000000004 3641.1 4064.8 False True 3042.790272981003 2684.4080492754542 3059.607572843225 2509.3847404823764 3376.2951839257116 2721.6425503876644 2576.822244468083 2550.7905166443015 2449.7569068194475 2818.5729811462243 3055.397977227123 0.9958736294452999 0.8785788526677121 1.0013777568904207 0.821295542900021 1.1050263203321924 0.8907653178646295 0.8433671370060395 0.8348472230642864 0.8017799727165771 0.9224896403525719 1.0 11.577144593471095 DAGVIAGLNVLR ddPTM_A549_PD325901_60min_R1 2 DAGVIAGLNVLR 12 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 0 ; 156.48 2.4245e-13 17576600.0 3190.3 3610.8 4127.799999999999 3889.0 4842.700000000001 4839.0 3942.6 4861.2 4594.5 4731.2 4804.5 False True 3514.17690742527 3915.094788103701 4407.937330477846 4129.214697440172 4502.565458408045 4799.592788365337 4092.6378004735 4764.2395524623735 4401.409142804136 4432.471224568355 4213.576958234839 0.8340127502732113 0.9291618088171387 1.0461271680022735 0.9799784692125314 1.0685850770112122 1.1390779938135964 0.9712977456066203 1.1306876793009184 1.044577845956321 1.0519497492280798 1.0 12.040829759972114 -5.475318475711578 2.0277484902461995 1.0356332590736343 0.8151093974168089 0.6119169597983964 0.052545891980363135 0.2489990922741248 1.5024721163609709 0.0072860751234811285 0.08558695956998354 3.3471989320676464e-06 5.475318475711578 -0.22052386165682547 DAHDVS(ph)PT(ph)STDTEAQLTVER ddPTM_A549_MK2206_60min_R1 2 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.994)PT(0.39)S(0.32)T(0.263)DT(0.033)EAQLTVER;DAHDVS(0.991)PT(0.434)S(0.309)T(0.262)DT(0.003)EAQLTVER 94.882 3.2408e-06 11369100.0 552.51 634.38 507.15 432.42 886.0 682.69 451.6 559.8100000000001 782.35 808.78 989.88 True False 645.7601804274153 666.6672323439411 579.0714959573976 538.3629194120713 755.6705736771028 754.931802667054 533.6498743949167 639.1647818462228 605.1489741562291 626.0760362778947 744.0654767018268 0.8678808527575244 0.8959792561523428 0.7782534119499969 0.7235423981750093 1.015596875999028 1.0146039915914304 0.7172082176966381 0.8590168498065642 0.813300701490191 0.8414259979552651 1.0 9.539285771802382 -10.838563328991562 1.0420916618488554 1.0014846631284153 0.8522092237056745 0.0 0.10452054345015044 0.6291055294716743 1.19303693894465 0.06982278184934976 0.01646247594966349 1.4502292858828606e-11 10.838563328991562 -0.1492754394227408 DAHDVS(ph)PT(ph)STDTEAQLTVER ddPTM_A549_PD325901_60min_R1 1 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.968)PT(0.436)S(0.294)T(0.254)DT(0.041)EAQLT(0.007)VER 69.935 0.001468 8003800.0 488.24 215.3 0.0 460.42 343.21 448.7 357.69 317.2 451.39 358.35 352.1 True False 537.8057653767091 233.44408659541577 0.0 488.8590977103124 319.10411361022267 445.0459359660111 371.30208868547845 310.8731971614138 432.4196480510085 335.7237198436063 308.7939321457981 1.7416332038635471 0.7559866379925961 0.0 1.583124041049796 1.0333885494212256 1.4412392525766378 1.20242676436455 1.0067335034764673 1.400350211048966 1.0872095753652737 1.0 8.270500593452043 DAHDVS(ph)PTS(ph)TDTEAQLTVER ddPTM_A549_MK2206_60min_R1 1 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.73)PT(0.335)S(0.675)T(0.23)DT(0.029)EAQLT(0.001)VER 42.791000000000004 0.022888 2748800.0 183.8 391.48 214.22 163.43 413.03 242.51 298.93 384.77 443.57 236.67 388.38 True False 214.8209465214367 411.4046598537248 244.59961720199874 203.47035733665152 352.27383413753273 268.17224723489045 353.2417115874058 439.31232580870534 343.10210323573665 183.20608262554643 291.9345272572995 0.7358531672826149 1.4092360493252962 0.8378577878402794 0.6969725686380385 1.2066878058142556 0.9186040779566099 1.2100031979981338 1.5048316824186845 1.1752707240871856 0.6275588034986894 1.0 8.189501039042796 -7.299082269695495 1.8599306426181985 1.1267574964991303 0.9650808957326318 0.03915599235594014 0.2746574952345396 0.6978545829404849 4.706713105466551 0.03649284462631844 0.06692667026059552 5.022474382841359e-08 7.299082269695495 -0.16167660076649848 DAHDVS(ph)PTS(ph)TDTEAQLTVER ddPTM_A549_PD325901_60min_R1 2 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.779)PT(0.222)S(0.677)T(0.31)DT(0.012)EAQLTVER;DAHDVS(0.853)PT(0.194)S(0.552)T(0.391)DT(0.011)EAQLTVER 81.477 5.9779e-05 8643800.0 786.1800000000001 878.55 708.21 1069.94 966.4000000000001 901.01 1053.81 771.1800000000001 919.81 618.82 801.39 True False 865.9924148448737 952.5884917714926 756.2733894126931 1136.0277637899562 898.52339789901 893.6724732889132 1093.9133162169583 755.7982099209936 881.1535844254371 579.7475995915181 702.8241104297674 1.2321609375570952 1.3553725286814615 1.0760492962460297 1.6163756293097153 1.2784470318606103 1.271544985476444 1.5564538836723247 1.0753731960886106 1.2537327211023304 0.8248829130762323 1.0 9.457019873723203 -10.164142921807684 0.49113437752409833 0.9747717699755996 1.326561228252613 0.43602422075792935 0.16652039136546679 0.9309521881257575 0.3986599641755365 0.1479151662464189 0.040051252988463154 6.852626765051822e-11 10.164142921807684 0.35178945827701336 DAHDVS(ph)PTST(ph)DTEAQLTVER ddPTM_A549_MK2206_60min_R1 2 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.99)PT(0.011)S(0.017)T(0.981)DT(0.002)EAQLTVER;DAHDVS(0.998)PT(0.003)S(0.249)T(0.747)DT(0.002)EAQLTVER 135.55 6.5007e-17 53125000.0 778.62 884.45 844.26 781.55 1448.9 971.9200000000001 1042.12 777.09 1825.65 1590.4 1532.77 True False 910.0320205686671 929.46472720861 963.9887630424765 973.0297850851125 1235.7687293462238 1074.767929291719 1231.4597145802268 887.2448872383159 1412.1431899639797 1231.127535419229 1152.1409067000645 0.7898617393727994 0.8067283452948143 0.8366934612221268 0.844540610811261 1.0725847178585857 0.9328441712655134 1.0688447111103323 0.770083660842789 1.225668823797436 1.0685563964093558 1.0 10.170101453669755 -6.774318248777917 0.5497475818698134 1.0895523367189162 0.7517693360741271 0.38230279118304455 0.1122524530153837 0.8616332335212292 0.40936576745500314 0.026944804802652475 0.13915415280634338 1.6814414577916395e-07 6.774318248777917 -0.33778300064478906 DAHDVS(ph)PTST(ph)DTEAQLTVER ddPTM_A549_PD325901_60min_R1 2 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.958)PT(0.049)S(0.189)T(0.79)DT(0.015)EAQLTVER;DAHDVS(0.961)PT(0.039)S(0.184)T(0.793)DT(0.024)EAQLTVER 101.5 2.5463e-09 83495000.0 694.3 880.1500000000001 919.88 664.51 637.38 895.8299999999999 889.5 588.5699999999999 838.04 923.28 1106.99 True False 764.7848248833543 954.323329386694 982.3085884878044 705.5552734882925 592.6126276416294 888.5346574914903 923.3504092530766 576.8305096257669 802.8200931626025 864.9839432320491 970.837247787779 0.7877580167283952 0.9829900238801974 1.0118159256107704 0.726749282741286 0.6104139792658347 0.9152251415117936 0.9510867154686231 0.5941577859112588 0.8269358175038785 0.8909669928745163 1.0 9.923085650723435 -10.465432861740384 0.9777138286184828 0.9923805558328113 0.8264985889420159 0.08948829360798172 0.13638838788510854 0.6942967364483961 1.2632248727873092 0.07145181360664109 0.024958832741293777 3.424263197524215e-11 10.465432861740384 -0.16588196689079537 DAHDVS(ph)PTSTDTEAQLTVER ddPTM_A549_MK2206_60min_R1 6 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 DAHDVS(0.998)PT(0.002)STDTEAQLTVER;DAHDVS(0.956)PT(0.038)S(0.005)T(0.001)DTEAQLTVER;DAHDVS(0.97)PT(0.025)S(0.004)T(0.001)DTEAQLTVER;DAHDVS(0.998)PT(0.002)STDTEAQLTVER;DAHDVS(0.986)PT(0.011)S(0.003)T(0.001)DTEAQLTVER;DAHDVS(0.648)PT(0.273)S(0.063)T(0.015)DT(0.001)EAQLTVER 229.6 2.8115999999999995e-75 1590497600.0 6020.36 6171.719999999999 5521.7699999999995 4808.83 7286.2 5954.02 6080.29 5897.46 9006.43 8785.41 9145.01 True False 7036.449584329684 6485.834186452513 6304.84001623322 5986.9935658765835 6214.40963197078 6584.0704444413905 7184.999988451429 6733.443015213781 6966.487985313334 6800.779779267766 6874.051627563919 1.0236247799063034 0.9435242180092578 0.9171941611482454 0.870955571801299 0.9040388359976708 0.9578150996190155 1.0452350924512486 0.9795450165392534 1.013447143367204 0.9893408062281138 1.0 12.746944971773917 -7.556319380180887 6.691410929075319 1.0066452999670314 0.9284942532749527 0.4604379279455869 0.03805839704955471 0.11723680156045442 16.01739975720096 0.005769048265483706 0.008634245884055421 2.777669817969864e-08 7.556319380180887 -0.07815104669207873 DAHDVS(ph)PTSTDTEAQLTVER ddPTM_A549_PD325901_60min_R1 6 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 DAHDVS(0.992)PT(0.008)STDTEAQLTVER;DAHDVS(0.999)PT(0.001)STDTEAQLTVER;DAHDVS(0.998)PT(0.002)STDTEAQLTVER;DAHDVS(0.812)PT(0.187)ST(0.001)DTEAQLTVER;DAHDVS(0.981)PT(0.017)S(0.002)TDTEAQLTVER;DAHDVS(0.969)PT(0.027)S(0.004)T(0.001)DTEAQLTVER 261.19 8.645399999999998e-99 1167260300.0 6657.390000000001 6403.389999999999 7105.99 7170.4800000000005 8163.35 7281.780000000001 6571.169999999999 5283.55 7851.119999999999 8575.57 8791.09 True False 7333.243331888511 6943.02614799916 7588.245213189171 7613.38426425837 7589.9844580286435 7222.479597946466 6821.239470232194 5178.165450385208 7521.164729405244 8034.107046684072 7709.841661311008 0.9511535585338522 0.900540692403603 0.9842284117542877 0.9874890560286507 0.9844539993753927 0.9367870204377623 0.8847444305454502 0.671630583072791 0.975527781218573 1.0420586309833404 1.0 12.91248551616594 -8.973707720028102 24.998475262111423 0.9892035953036901 0.9133902035923646 0.18652744443046532 0.08521409309512394 268.52490544178914 255313.611998381 0.01537197148559884 0.016017807737123864 1.062410318274479e-09 8.973707720028102 -0.0758133917113255 DAHDVSPT(ph)S(ph)TDTEAQLTVER ddPTM_A549_MK2206_60min_R1 1 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.146)PT(0.837)S(0.724)T(0.273)DT(0.02)EAQLTVER 67.194 0.0019944000000000003 2713700.0 329.73 250.47 473.7 195.42 617.43 365.88 291.99 381.57 415.97 602.79 349.65 True False 385.3803628754806 263.21785315613175 540.8777829735166 243.2979087727372 526.6068649045753 404.5971787485124 345.0408034202204 435.658716009116 321.7534591675933 466.6193203441634 262.82225515092097 1.4663155624099748 1.001505192187715 2.0579603605597523 0.9257127355254894 2.003661617628921 1.5394327185731655 1.3128294756548944 1.6576172963699243 1.2242245580871076 1.7754178392397386 1.0 8.037943634523405 -9.187493530087107 1.2571701592250573 1.060768665002709 1.4931174690035756 0.0 0.3988086362348532 0.38658111150016955 1.2660860970686267 0.07026778346296932 0.06239214984918901 6.493913058273512e-10 9.187493530087107 0.4323488040008665 DAHDVSPT(ph)S(ph)TDTEAQLTVER ddPTM_A549_PD325901_60min_R1 1 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 DAHDVS(0.157)PT(0.569)S(0.632)T(0.62)DT(0.022)EAQLTVER 94.551 3.4407e-06 6278300.0 400.1 576.21 688.65 315.92 809.47 400.52 549.35 345.95 558.83 487.22 753.19 True False 440.7178574619475 624.7692389091709 735.3859301888579 335.4336608936229 752.6156197198998 397.2582979119829 570.2558148658545 339.04975585747536 535.3443184836731 456.45684605051457 660.5524048647934 0.6671959018182014 0.9458284222537243 1.1132893087254476 0.5078077960556088 1.139373067416128 0.6014031513416359 0.863301398444804 0.5132821459137288 0.8104494276926464 0.6910229115643678 1.0 9.367529211866735 -10.38216775964787 1.0432950253088458 0.9866520829213724 0.8030713408672401 0.0 0.2236757438263707 0.7769695743208902 1.6488104055231183 0.08667890071669 0.03463090227821863 4.1479378478235426e-11 10.38216775964787 -0.18358074205413233 DAHLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DAHLSPK 7 0 O60503 O60503 ADCY9 Adenylate cyclase type 9 1 DAHLS(1)PK;DAHLS(1)PK 90.15 0.003863 26049000.0 4425.9 4403.2 4064.5 2562.7 6217.4 3880.5 3982.3999999999996 3932.1000000000004 6499.799999999999 6200.7 5940.2 True False 5172.883717133985 4627.304072412183 4640.907217428458 3190.5616150439755 5302.828696139979 4291.13193433257 4705.95053097944 4489.487216551214 5027.605678047754 4799.957563426822 4465.084398820252 1.158518687463275 1.0363307071272363 1.0393772665651428 0.7145579635374807 1.1876211561736822 0.9610416178172034 1.0539443626693437 1.0054652534087396 1.125982227654225 1.0749981712988559 1.0 12.124471730021723 DAHLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DAHLSPK 7 0 O60503 O60503 ADCY9 Adenylate cyclase type 9 1 DAHLS(1)PK;DAHLS(1)PK 75.294 0.0055941 32516000.0 8081.5 7928.3 8116.1 8306.3 9253.5 7326.4 7822.6 4664.200000000001 8258.5 8696.3 8747.2 True False 8901.927930714142 8596.445665371275 8666.907352074046 8819.361286023988 8603.56608284198 7266.736227460177 8120.293323690975 4571.168872005884 7911.423964707356 8147.21413388016 7671.349853069374 1.16041219618636 1.1205910081042336 1.1297760522036862 1.149649208410862 1.1215191912280755 0.9472565280740902 1.0585220957485044 0.59587542734437 1.0312948980604666 1.0620313621364028 1.0 12.905264741788496 -7.211602345167037 6.267767356742405 0.9796550924240901 1.1368135923743856 0.35223998097980813 0.12271194226638688 0.23397548461653989 22.328439692396742 0.018002127689843373 0.03120434325460039 6.143242439434148e-08 7.211602345167037 0.15715849995029552 DAIAQAVR ddPTM_A549_MK2206_60min_R1 2 DAIAQAVR 8 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 93.561 0.0070827 17665500.0 9472.3 10754.2 9804.3 8289.2 14482.199999999999 10527.9 9857.9 10339.0 13513.5 12871.5 12404.3 False True 11070.992664499472 11301.542845097909 11194.697166154216 10320.054372116336 12351.887564454333 11641.955390145566 11648.952827275574 11804.584911859558 10452.713826625179 9963.819210355014 9323.969968736083 1.187368974977534 1.212095586214109 1.2006363387795982 1.1068305031783878 1.3247455328439568 1.2486049857712809 1.2493554640711328 1.2660470755956046 1.1210582897278576 1.0686241208159604 1.0 13.186728642408006 -9.374581263293338 1.0531466525938378 1.026879766162723 1.223653571096 0.6080528175290019 0.05756887401483356 0.18672400814855938 0.4344782046380011 0.015571103297573604 0.012198430357156193 4.2210328953079663e-10 9.374581263293338 0.196773804933277 DAIAQAVR ddPTM_A549_PD325901_60min_R1 2 DAIAQAVR 8 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 122.18 0.0032271 27389000.0 12641.9 12115.9 12699.5 11531.900000000001 13391.4 12804.9 11850.599999999999 12589.8 13043.5 14504.5 13548.099999999999 False True 13925.296381525093 13136.94941375475 13561.36443829725 12244.199272154885 12450.83426182202 12700.62113985107 12301.581067897137 12338.686562492956 12495.327054993082 13588.683394646541 11881.76958848193 1.171988421238545 1.1056391319429035 1.1413589816994518 1.0305030055476156 1.0478939327262948 1.0689166327684831 1.035332403670087 1.0384552966297174 1.051638559554793 1.1436582146668857 1.0 13.536462096698779 -2.0000000000000004 0.26595397191943826 1.016631587247395 2.064149722850134 0.31271263441001207 0.04421185840972574 15.325451878527236 0.1889185133722758 0.010230086506591804 7.454290143086282 0.00999999999999999 2.0000000000000004 1.047518135602739 DAKPPTGPSPAT(ph)PARR ddPTM_A549_PD325901_60min_R1 1 DAKPPTGPSPATPARR 16 2 P41231 P41231 P2RY2 P2Y purinoceptor 2 1 DAKPPTGPS(0.002)PAT(0.997)PARR 68.49 0.00067381 5807400.0 1634.8 2135.3 1845.8 1744.3 2340.6 2083.0 1683.5 2240.1 2156.7 2393.7 2584.4 True False 1800.7636925238487 2315.2492248360018 1971.067087697081 1852.041449407275 2176.204330631645 2066.0367386164485 1747.5665137465476 2195.419448175546 2066.0613991262767 2242.5613734886033 2266.535183861405 0.7945006569260309 1.0214927353969439 0.8696388662888758 0.8171245090720481 0.9601458411618976 0.9115396722395567 0.7710299518798065 0.9686235906716869 0.9115505525073786 0.9894227053947785 1.0 11.14627284129229 -10.220879884313572 0.5218700265600509 1.0081480815074326 0.8884008184463184 0.24169251275219183 0.07223943085824616 1.1735585467842629 0.5602566722638969 0.06567717954725082 0.017376050368576274 6.013400310603854e-11 10.220879884313572 -0.11974726306111427 DALDGPAAEAEPEHSFDGLR ddPTM_A549_MK2206_60min_R1 2 DALDGPAAEAEPEHSFDGLR 20 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 117.65 1.0036e-16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DALDLS(ph)DINSEPPR ddPTM_A549_MK2206_60min_R1 2 DALDLSDINSEPPR 14 0 Q99640-4;Q99640-3;Q99640 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 DALDLS(0.996)DINS(0.004)EPPR;DALDLS(0.988)DINS(0.012)EPPR 88.28200000000001 7.7012e-05 4647300.0 3826.1 4261.1 4349.4 3979.8999999999996 5859.6 5276.4 4203.4 4407.0 6708.5 5626.8 6210.6 True False 4471.852140836062 4477.971789370353 4966.210321437647 4954.975678664501 4997.6606021651805 5834.7451458091455 4967.103370309103 5031.705745871467 5189.035461273171 4355.7019720176795 4668.336616159908 0.9579112451652061 0.9592221293274807 1.0638072465140194 1.061400684242084 1.070544181596778 1.2498552751341023 1.0639985456736314 1.0778369598399826 1.1115384103431643 0.9330308266417608 1.0 12.188692876760374 -5.772089744627807 5.294767469832751 1.0718078662388952 0.9569042312489359 0.26079729473480595 0.07255911378128888 0.15289748848839543 12.530252122954794 0.009400372906194873 0.033515443315763074 1.6900916471719704e-06 5.772089744627807 -0.11490363498995937 DALDLS(ph)DINSEPPR ddPTM_A549_PD325901_60min_R1 2 DALDLSDINSEPPR 14 0 Q99640-4;Q99640-3;Q99640 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 DALDLS(0.998)DINS(0.002)EPPR;DALDLS(1)DINSEPPR 186.42 3.7668e-26 8734100.0 4011.7999999999997 4372.200000000001 4167.5 4715.9 4777.5 4000.3 3466.4 4492.2 5113.1 4318.2 4444.7 True False 4419.074982668935 4740.660638237234 4450.331611213341 5007.190432414016 4441.944881480258 3967.7228830952376 3598.3157488868615 4402.599546937273 4898.214188284215 4045.548115051379 3898.030077274719 1.1336687750132757 1.2161683066210802 1.1416873454000538 1.2845438165307228 1.139535815122754 1.0178789810337339 0.9231113350984196 1.1294421694188979 1.256587068642828 1.0378442533413688 1.0 11.928529507163399 -6.993788115861126 24.308299989251697 1.1007966572503884 1.1943837626417269 0.2658583578879623 0.09181415391194624 197.33184626238824 772185.3675067809 0.016942858557428945 0.03195479069000748 1.0144061747900267e-07 6.993788115861126 0.09358710539133841 DALDLSDINSEPPRGS(ph)FPSFEPR ddPTM_A549_MK2206_60min_R1 2 DALDLSDINSEPPRGSFPSFEPR 23 1 Q99640-4;Q99640-3;Q99640 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 DALDLSDINS(0.008)EPPRGS(0.989)FPS(0.002)FEPR;DALDLSDINS(0.008)EPPRGS(0.793)FPS(0.198)FEPR 93.446 1.9531e-07 8650900.0 1444.52 1997.3200000000002 1829.26 1760.49 3195.3 2132.33 2096.0 1824.8200000000002 2823.14 2226.71 3237.1600000000003 True False 1688.3196608767437 2098.9750567565184 2088.676574376474 2191.8101290313984 2725.2756027883142 2357.9717452739023 2476.816068936547 2083.493823276872 2183.703297628192 1723.6946644827415 2433.283830929089 0.6938441128062321 0.8626100375454666 0.858377698412176 0.9007622132575097 1.1199990597676126 0.9690491981667297 1.017890324775978 0.8562477573696535 0.8974305709311351 0.7083820812735157 1.0 11.248688898235137 -5.228120018099044 1.05024638240513 0.9578971867292606 0.5603549912696894 0.28683301571863606 0.10226678190641188 1.1576785067713717 0.9472171978599907 0.011083019673221004 0.5213575449078236 5.913981775891419e-06 5.228120018099044 -0.39754219545957126 DALDLSDINSEPPRGS(ph)FPSFEPR ddPTM_A549_PD325901_60min_R1 2 DALDLSDINSEPPRGSFPSFEPR 23 1 Q99640-4;Q99640-3;Q99640 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 DALDLSDINS(0.253)EPPRGS(0.745)FPS(0.002)FEPR;DALDLS(0.012)DINS(0.04)EPPRGS(0.931)FPS(0.018)FEPR 85.537 3.6555e-06 14099100.0 3700.9 3702.7 3527.3 4626.6 4637.200000000001 4563.5 3601.4 4437.5 4117.5 4382.3 4417.3 True False 4076.612643541419 4014.739523626781 3766.683789378001 4912.37457422903 4311.4990694715325 4526.336369023605 3738.4532477617 4348.990581348592 3944.455793991952 4105.6008301120055 3874.0001035718083 1.0523006026207389 1.0363292246495326 0.9722983192243949 1.268036768945836 1.1129320996910539 1.1683882932399372 0.9650111377939472 1.1226098257815855 1.0181868065401403 1.059783355794612 1.0 11.919608277173861 -8.765297983288642 1.0649803065808705 1.0043372398935233 1.0922148468477269 0.06783891466445524 0.0839729162100618 0.5962718160634268 1.3456291364630903 0.01777622957902454 0.01870386541885665 1.7167300797323788e-09 8.765297983288642 0.08787760695420355 DALGDSLQVPVS(ph)PSSTTSSR ddPTM_A549_MK2206_60min_R1 4 DALGDSLQVPVSPSSTTSSR 20 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 DALGDSLQVPVS(0.974)PS(0.016)S(0.003)T(0.004)T(0.001)S(0.001)S(0.002)R;DALGDSLQVPVS(0.967)PS(0.021)S(0.003)T(0.005)T(0.001)S(0.001)SR;DALGDSLQVPVS(0.996)PS(0.004)STTSSR;DALGDSLQVPVS(0.996)PS(0.003)S(0.001)TTSSR 254.32 1.7690999999999996e-97 128904000.0 5167.1 6199.7 5490.299999999999 4955.9 6360.6 5376.0 5644.900000000001 5063.18 7191.5 7161.1 7888.6 True False 6039.180156533817 6515.238248940274 6268.907097022372 6170.095722478803 5424.964165835871 5944.884751700013 6670.505261230879 5780.901270338439 5562.636732465679 5543.402536400053 5929.642905715873 1.01847282417502 1.0987572696257843 1.057214944761592 1.040550977619773 0.9148888477932597 1.0025704492203817 1.1249421537342246 0.9749155829883019 0.9381065303449524 0.9348627943609379 1.0 12.533729510231844 -6.54042374577677 0.5072741148723231 0.975210171015895 1.079047020023285 0.2058791221904791 0.05735602921060772 1.8722173262289852 0.6625195420865426 0.013237957944434347 0.0922652899920324 2.881218895073497e-07 6.54042374577677 0.10383684900738988 DALGDSLQVPVS(ph)PSSTTSSR ddPTM_A549_PD325901_60min_R1 2 DALGDSLQVPVSPSSTTSSR 20 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 DALGDSLQVPVS(0.995)PS(0.004)STTSSR;DALGDSLQVPVS(0.689)PS(0.275)S(0.028)T(0.006)T(0.001)SSR 254.26 1.7844e-97 152458000.0 6425.200000000001 6861.299999999999 6082.6 6628.200000000001 7846.200000000001 6893.5 7684.0 7297.2 7734.7 8737.9 9751.7 True False 7077.481574017761 7439.5258307344475 6495.401813645174 7037.608860265612 7295.109979920543 6837.36162153264 7976.418824846138 7151.651621457341 7409.637457143792 8186.1875027806545 8552.302721119508 0.8275527427882381 0.8698856990133067 0.7594915691659377 0.822890523143734 0.852999504087433 0.7994760995361049 0.9326632937289214 0.8362252664182098 0.8663909240310265 0.9571910361130285 1.0 13.062097204901077 -11.250132117327242 0.26675430183665305 1.1177985902451752 0.8143453130213012 0.6422614008436696 0.040683066674037656 2.374946630928856 0.1710627426139334 0.23009310352199508 0.02233053673834095 5.621702805733311e-12 11.250132117327242 -0.30345327722387405 DANGNSFATR ddPTM_A549_MK2206_60min_R1 2 DANGNSFATR 10 0 P62701;Q8TD47;C9JEH7;P22090 P62701 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 0 ; 138.25 8.892100000000001e-07 11487200.0 2915.1 3172.0 2798.9 2720.8999999999996 3790.3999999999996 2275.6 2217.4 2745.8 3556.3999999999996 4697.4 4318.9 False True 3407.0976126476594 3333.441251292571 3195.826106743883 3387.5206221458434 3232.837181112518 2516.4024815789726 2620.272877509494 3135.0255586598314 2750.881078403799 3636.2540775140146 3246.3979344238883 1.0495009180851667 1.0268122758290659 0.9844221722963301 1.0434705450695154 0.9958228308465897 0.7751367923493759 0.8071323757709611 0.9656935538976613 0.8473641044538107 1.1200888341371222 1.0 11.664624136930238 -7.020723891820571 24.621691845197674 0.9088045494388846 1.0226966164178641 0.2339219280980377 0.09085710303023133 583.519283061164 693269.1705490742 0.011694341449824536 0.02041006213436732 9.53402108767292e-08 7.020723891820571 0.11389206697897958 DANGNSFATR ddPTM_A549_PD325901_60min_R1 2 DANGNSFATR 10 0 P62701;Q8TD47;C9JEH7;P22090 P62701 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 0 ; 169.99 5.4849e-10 22538300.0 5636.6 6491.799999999999 6296.200000000001 6318.2 7715.0 6714.9 6581.5 6899.9 6669.5 6828.6 8410.4 False True 6208.823482554391 7038.886768974079 6723.497994126322 6708.460864326689 7173.125015305114 6660.216080718 6831.962584034994 6762.276081633162 6389.204108811008 6397.441030623834 7375.97411791826 0.8417631872475609 0.9542992771456039 0.9115403452668177 0.9095016816870333 0.9724986694136616 0.9029608800468146 0.926245465997269 0.9167976966195885 0.8662183471183668 0.8673350703716135 1.0 12.848617878062678 -10.999089042147416 1.2792731218276352 0.9999669105669555 0.9096091074213533 0.0 0.05158654912437947 0.3126994995330159 0.9114182579672778 0.024440932412802707 0.005582977545282045 1.0020997593853569e-11 10.999089042147416 -0.09035780314560227 DANIKS(ph)PTAQAAPR ddPTM_A549_MK2206_60min_R1 2 DANIKSPTAQAAPR 14 1 Q96PU8-5;Q96PU8-3 Q96PU8-5 1 DANIKS(0.5)PT(0.5)AQAAPR;DANIKS(0.5)PT(0.5)AQAAPR 62.658 0.0016664000000000002 18173500.0 5718.0 5445.200000000001 4822.6 4851.6 5672.6 4185.8 4736.1 4260.0 6455.5 5980.6 6363.1 True False 6683.058608321956 5722.337421670333 5506.517196892726 6040.2422177966 4838.168054447784 4628.738577690833 5596.588064928619 4863.868045702848 4993.339557315189 4629.5783062929095 4782.966657374018 1.3972622196766769 1.1963991872801505 1.1512765175569837 1.2628652153542006 1.0115412464748548 0.9677547240590926 1.170108107757812 1.0169144788421434 1.0439837688637938 0.9679302905353467 1.0 12.223690018823683 -2.0000000000733094 0.3401840229631816 1.0151534483054998 4.986319012282198 0.702407591026817 0.07241842276567434 19.86086093601493 0.24572445765078477 0.018442703327875287 50.90070472831194 0.00999999999831199 2.0000000000733094 3.9711655639766983 DAPIS(ph)PASIASSSSTPSSK ddPTM_A549_MK2206_60min_R1 2 DAPISPASIASSSSTPSSK 19 0 Q04727-4;Q04727;Q04727-3;H0Y5S0;H7C4E4 Q04727-4 TLE4 Transducin-like enhancer protein 4 1 DAPIS(0.934)PAS(0.066)IASSSSTPSSK;DAPIS(0.999)PAS(0.001)IASSSSTPSSK 368.44 5.646999999999997e-257 28770000.0 7003.1 7908.1 7201.7 6852.200000000001 10995.0 7882.5 7476.6 7776.4 11947.0 12643.8 12177.7 True False 8185.0520706434845 8310.58851177389 8223.009351151315 8530.98930760695 9377.65006498843 8716.620918019973 8835.001441322032 8878.728514226204 9241.023575438701 9787.55679849953 9153.641002577928 0.894185392275963 0.9078997646328265 0.8983320788782824 0.9319777021192308 1.0244721267031789 0.9522572401042517 0.9651898560183694 0.9699668702023271 1.0095462092992464 1.069252857496058 1.0 13.160129996531115 -6.15287584067455 0.46055935094102224 1.0038585090535632 0.8530819361198982 0.6576285849412264 0.03136457978208178 0.9162903124438496 0.2127271045094161 0.005703196483738025 0.06485484652012297 7.032733481441247e-07 6.15287584067455 -0.15077657293366498 DAPIS(ph)PASIASSSSTPSSK ddPTM_A549_PD325901_60min_R1 2 DAPISPASIASSSSTPSSK 19 0 Q04727-4;Q04727;Q04727-3;H0Y5S0;H7C4E4 Q04727-4 TLE4 Transducin-like enhancer protein 4 1 DAPIS(1)PASIASSSSTPSSK;DAPIS(0.912)PAS(0.088)IASSSSTPSSK 346.63 6.378099999999996e-230 44855000.0 10061.900000000001 9109.9 11292.400000000001 10162.2 12557.0 11285.5 10788.0 11360.0 10558.2 11120.5 10834.0 True False 11083.376680820722 9877.62324419683 12058.770170717582 10789.89601396928 11675.03963929829 11193.594629695594 11198.543243420116 11133.415888252404 10114.475571129531 10418.349732163593 9501.486682384491 1.166488682383675 1.0395871271923882 1.2691456162406909 1.1356008143413459 1.2287592489019121 1.1780887564099023 1.1786095816123094 1.1717551432128477 1.0645150500375384 1.0964967989145258 1.0 13.213937551947328 -8.954626543831916 1.6244351240894621 1.0218114210745395 1.1727683058139184 0.41261785686113783 0.05958571332385929 0.16837286826453293 0.8904750767660892 0.01084202736521668 0.010846126468367231 1.1101290210950843e-09 8.954626543831916 0.15095688473937896 DAPSLEEVEGHVADGS(ph)ATEMGTTK ddPTM_A549_MK2206_60min_R1 1 DAPSLEEVEGHVADGSATEMGTTK 24 0 C9J470;E9PHA2;Q15003;Q15003-2 C9J470 NCAPH Condensin complex subunit 2 1 DAPSLEEVEGHVADGS(0.716)AT(0.249)EMGT(0.028)T(0.007)K 110.61 7.6835e-12 18818000.0 1649.0 1614.7 1524.7 1646.6 2249.4 2113.3 1546.4 1867.7 2582.3 2284.7 2772.8 True False 1927.3108858207247 1696.8813330586727 1740.9253867420748 2050.017073918683 1918.5162397621611 2336.9280033049936 1827.3608630741778 2132.4521945913634 1997.4131730857416 1768.5846832069362 2084.237234613109 0.92470801970798 0.8141498025648984 0.8352817797467463 0.9835814464274368 0.9204884203684662 1.1212389667046663 0.8767528152395692 1.023133143951919 0.9583425245046615 0.8485524842546215 1.0 11.025303783833552 -6.266061561227587 24.158599174477928 0.9815600594374895 0.8536568559623848 0.27908974723604163 0.07475640992066977 146.7836189405242 767192.5765112049 0.007902098232822728 0.018960342872113584 5.419240672393768e-07 6.266061561227587 -0.12790320347510464 DAPSLEEVEGHVADGS(ph)ATEMGTTK ddPTM_A549_PD325901_60min_R1 1 DAPSLEEVEGHVADGSATEMGTTK 24 0 C9J470;E9PHA2;Q15003;Q15003-2 C9J470 NCAPH Condensin complex subunit 2 1 DAPSLEEVEGHVADGS(0.997)AT(0.002)EMGTTK 114.79 3.2675e-16 7787800.0 3854.6 3455.7 3918.2 3810.1 3771.6 4689.3 3930.0 3835.0 4501.3 4571.9 5178.7 True False 4245.916154393458 3746.923966780206 4184.112614050658 4045.441223635074 3506.6958273136424 4651.111895532458 4079.5583005785147 3758.5079165006987 4312.126014692405 4283.229453754663 4541.7527304840805 0.9348629056564488 0.8249951481574475 0.9212550445485604 0.8907224729523954 0.7721018812355914 1.0240786259265862 0.8982343475453136 0.827545694258899 0.9494409472690072 0.9430785223083109 1.0 12.149033447286552 -9.015731311080746 3.4802347598875176 0.9797398018148743 0.8869706104551571 0.21903606509320261 0.06417460872438982 0.1950399297614709 4.899789379223142 0.011240893106140295 0.01133878859130691 9.64425508994473e-10 9.015731311080746 -0.09276919135971717 DAPSLEEVEGHVADGS(ph)ATEMGTTKK ddPTM_A549_PD325901_60min_R1 2 DAPSLEEVEGHVADGSATEMGTTKK 25 1 C9J470;E9PHA2;Q15003;Q15003-2 C9J470 NCAPH Condensin complex subunit 2 1 DAPSLEEVEGHVADGS(0.328)AT(0.328)EMGT(0.263)T(0.081)KK;DAPSLEEVEGHVADGS(0.315)AT(0.315)EMGT(0.315)T(0.054)KK 93.667 6.8335000000000004e-09 16025200.0 3122.5 4041.7 4079.0 4129.6 4207.700000000001 3919.4 4141.4 4482.9 4185.5 4476.9 4652.7 True False 3439.493901336991 4382.308243347385 4355.825469019609 4384.676012997927 3912.1656677769683 3887.4817058729277 4299.003243261034 4393.485042732985 4009.5979904683213 4194.227769967465 4080.447395895358 0.8429207799117515 1.0739773897724247 1.0674872253962302 1.0745576618408563 0.958759000719463 0.9527096734008775 1.0535617362903704 1.0767165010269513 0.9826368536209273 1.0278842889107116 1.0 11.99451162814639 DAPSLEEVEGHVADGSAT(ph)EMGTTK ddPTM_A549_MK2206_60min_R1 1 DAPSLEEVEGHVADGSATEMGTTK 24 0 C9J470;E9PHA2;Q15003;Q15003-2 C9J470 NCAPH Condensin complex subunit 2 1 DAPSLEEVEGHVADGS(0.118)AT(0.61)EMGT(0.215)T(0.056)K 89.723 7.7314e-08 15761000.0 1099.6 1239.3 1054.5 1045.8 1631.4 1550.7 1116.2 955.16 2437.8 1805.1 1582.1 True False 1285.1855973611082 1302.3750765217148 1204.043956397665 1302.0210469477465 1391.4232211025126 1714.7940447286487 1318.9990916731745 1090.556855054819 1885.6421923666583 1397.3266563036038 1189.220906261325 1.080695428910241 1.0951498326884652 1.0124645051716596 1.0948521339412396 1.1700292298735915 1.441947442817518 1.1091287453227228 0.9170347151761011 1.5856113716456128 1.1749933498028742 1.0 10.215801015528204 -6.873684325130307 3.667052962592045 1.2510247521630027 1.067402098624901 0.07679566345275124 0.17955402442628052 0.416060156212457 10.746148727359735 0.03462590559875395 0.06858208379938155 1.3375673985617273e-07 6.873684325130307 -0.1836226535381016 DAPSLEEVEGHVADGSAT(ph)EMGTTK ddPTM_A549_PD325901_60min_R1 1 DAPSLEEVEGHVADGSATEMGTTK 24 0 C9J470;E9PHA2;Q15003;Q15003-2 C9J470 NCAPH Condensin complex subunit 2 1 DAPSLEEVEGHVADGS(0.348)AT(0.589)EMGT(0.028)T(0.035)K 84.762 1.5513999999999999e-06 24333000.0 3743.9 3865.3 4217.1 3854.7 4118.4 4168.3 4165.4 4740.3 4579.0 4343.0 5050.6 True False 4123.977971886489 4191.042396271529 4503.297765482371 4092.7960643411247 3829.1377917086943 4134.35474679546 4323.916576394341 4645.750997806587 4386.560553901431 4068.782238818985 4429.408218391278 0.9310449090610758 0.946185627883645 1.0166815844121788 0.9240051633415699 0.864480671663946 0.9333876091233293 0.976183806776055 1.048842366462643 0.9903265487448325 0.9185837110079529 1.0 12.112898248132659 -7.904129072143194 4.430830877696532 0.9998294262822862 0.9365407916143933 0.2410461187457602 0.043756615843033815 0.17325974823993515 6.129057621931858 0.00595904790405384 0.008315144061001369 1.2470128474541338e-08 7.904129072143194 -0.06328863466789292 DAPTS(ph)PASVASSSSTPSSK ddPTM_A549_MK2206_60min_R1 2 DAPTSPASVASSSSTPSSK 19 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 DAPT(0.011)S(0.989)PASVASSSSTPSSK;DAPT(0.026)S(0.973)PAS(0.001)VASSSSTPSSK 274.23 6.604599999999998e-112 45126000.0 2815.5 3398.4 3140.0 2836.4 4353.3 3063.8 2831.7 2849.2 4437.2 3916.9 4395.4 True False 3290.687567633867 3571.3640442599826 3585.299215826142 3531.318127330833 3712.9353367816398 3388.009282414156 3346.183235881497 3253.0828253090503 3432.181284752374 3032.069569594806 3303.9008731312974 0.9960006955399641 1.080953751761685 1.0851715452431678 1.0688329532066132 1.1238034914960013 1.025457304111895 1.0127977092454732 0.9846187734518549 1.0388269553315919 0.9177241345988504 1.0 11.689954686919677 -7.494366439660521 23.66033304683157 1.0155219192567684 1.0724253338079963 0.3938728176832388 0.04268215780910534 264.79257225619006 219732.62307629111 0.004627864881216391 0.007387417158703055 3.20356514850645e-08 7.494366439660521 0.05690341455122794 DAPTS(ph)PASVASSSSTPSSK ddPTM_A549_PD325901_60min_R1 2 DAPTSPASVASSSSTPSSK 19 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 DAPT(0.002)S(0.998)PASVASSSSTPSSK;DAPT(0.001)S(0.995)PAS(0.004)VASSSSTPSSK 314.73 1.3257999999999992e-163 103958000.0 7374.3 5457.9 7065.5 6417.5 8616.2 7822.0 7237.3 8093.4 7042.400000000001 8144.099999999999 8764.0 True False 8122.933507327262 5917.856387501714 7545.007318303024 6813.8943998000295 8011.027836276334 7758.300225375838 7512.71941190252 7931.970787850529 6746.432418605693 7629.880136119201 7686.083559573343 1.056836481722841 0.769944321009986 0.9816452371123908 0.8865235912395247 1.042276963837878 1.009395769021083 0.9774444102347949 1.0319912249680037 0.8777464317575269 0.9926876382466414 1.0 12.908032945466497 DAPVHGS(ph)PTGPGAWTASK ddPTM_A549_MK2206_60min_R1 1 DAPVHGSPTGPGAWTASK 18 0 Q9BRP1 Q9BRP1 PDCD2L Programmed cell death protein 2-like 1 DAPVHGS(0.995)PT(0.005)GPGAWTASK 94.837 9.873e-07 4106700.0 2214.5 2349.0 2580.7 1912.7 2838.3 2218.0 1647.5 2152.7 3191.3 2917.4 3055.0 True False 2588.253460673131 2468.5540666097872 2946.6820656950704 2381.311585864366 2420.789829873276 2452.707287810757 1946.8294244145818 2457.851817367257 2468.4756454589046 2258.3573137777043 2296.3591862893295 1.1271117672385875 1.0749860393568074 1.2831973688125824 1.0369943866283002 1.0541860543101766 1.0680852117799868 0.8477895949546332 1.0703255100692162 1.0749518891457468 0.9834512506847711 1.0 11.165132604266837 -6.476324849256245 24.665397247161106 1.0286606099186688 1.1542553708218892 0.4055063256872974 0.0770541578906195 295.75134873871565 156695.98907043898 0.010423335215734467 0.024220765563307347 3.33945157923882e-07 6.476324849256245 0.12559476090322041 DAPVHGSPT(ph)GPGAWTASK ddPTM_A549_MK2206_60min_R1 1 DAPVHGSPTGPGAWTASK 18 0 Q9BRP1 Q9BRP1 PDCD2L Programmed cell death protein 2-like 1 DAPVHGS(0.319)PT(0.681)GPGAWTASK 129.32 1.6215e-12 4529800.0 2108.7 2411.7 2132.3 2173.9 2982.6 1837.1 2236.0 2090.7 3077.8 3643.8 4057.3 True False 2464.5970072347855 2534.445228796435 2434.6922031548042 2706.50559759008 2543.8634910263295 2031.500702631715 2642.252256747195 2387.0631275002215 2380.6832142366497 2820.663049270992 3049.760434216594 0.8081280678912991 0.8310309230723132 0.7983224439004878 0.8874485901333796 0.8341191204678289 0.6661181251613804 0.8663802661686515 0.7827051268416751 0.7806131876873754 0.9248802029250368 1.0 11.574480204733685 -10.725892429340325 0.8705249326320464 1.0060487048464248 0.8056753504957387 0.5025999662208778 0.05836500533451752 0.32352772741346225 0.41459281066781484 0.04289980633524456 0.009855617671814122 1.8797823635617444e-11 10.725892429340325 -0.20037335435068615 DAQHYGGWEHR ddPTM_A549_MK2206_60min_R1 2 DAQHYGGWEHR 11 0 Q14697;Q14697-2;F5H6X6;E9PKU7 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 107.09 0.00014252 17231800.0 756.9200000000001 740.01 575.48 673.4300000000001 1260.52 1025.47 679.86 826.6 1180.38 1182.53 1199.24 False True 884.66959108273 777.6733481617324 657.0917174279072 838.4203802314219 1075.0991778007474 1133.984554748105 803.3817617496193 943.7730813563322 913.0258146795297 915.3956516972462 901.4356106597763 0.9814007574376 0.8627053768072683 0.7289391606650312 0.9300945850339409 1.1926522150748666 1.2579762118762117 0.891224788825028 1.0469667164197878 1.0128574951806821 1.0154864539101713 1.0 9.816080633734668 -6.527782829961833 24.99591078558039 1.031792768712653 0.8534062373648469 0.3927127167788974 0.10897066414153429 112.45845591551037 573195.7540271243 0.015759287881147027 0.03289805197496511 2.9663143315941397e-07 6.527782829961833 -0.17838653134780602 DAQNSSDS(ph)SFEKNVEITEQLANGR ddPTM_A549_MK2206_60min_R1 2 DAQNSSDSSFEKNVEITEQLANGR 24 1 Q6PL18 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 DAQNS(0.044)S(0.13)DS(0.413)S(0.413)FEKNVEIT(0.001)EQLANGR;DAQNS(0.005)S(0.023)DS(0.486)S(0.486)FEKNVEITEQLANGR 105.54 2.3341999999999998e-11 13142000.0 2480.2 2973.9 3030.3 2626.8 3965.5 2898.0 2448.45 2698.35 4854.7 4461.1 4205.1 True False 2898.7971249318116 3125.2588074460828 3460.0421062796036 3270.366117921534 3382.180203066087 3204.6644364632907 2893.3016717498504 3080.8493758503 3755.118201362878 3453.334411631494 3160.8576151441107 0.9170919661307327 0.9887376111067233 1.0946529478904896 1.0346451868799003 1.0700197904712914 1.013859156802665 0.9153533705180636 0.9746878065906923 1.188006123202634 1.092530835646024 1.0 11.626100333333136 -8.720943536747168 24.999364101717862 1.0887808577831555 1.0048137041643748 0.27800895959896166 0.06598949003235752 198.1031741320427 122295.18168614227 0.01435660782000467 0.016278780964216703 1.9013254579237863e-09 8.720943536747168 -0.08396715361878071 DAQNSSDS(ph)SFEKNVEITEQLANGR ddPTM_A549_PD325901_60min_R1 1 DAQNSSDSSFEKNVEITEQLANGR 24 1 Q6PL18 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 DAQNS(0.016)S(0.035)DS(0.539)S(0.41)FEKNVEITEQLANGR 106.09 2.1770000000000003e-11 10012000.0 2522.7 2746.3 3182.2 3385.2 3232.2 3507.9 2812.9 3589.4 3415.3 3009.2 3283.4 True False 2778.8026468864136 2977.740339140687 3398.163228123115 3594.2961156529886 3005.1814224846657 3479.332825440539 2919.9464487779424 3517.8066011701712 3271.7668180256746 2819.198598446715 2879.562615187487 0.9650085857589477 1.0340946654312664 1.1800970085527596 1.248209049768819 1.043624266628076 1.2082851774396999 1.014024294306872 1.2216461564740548 1.1362026999411683 0.9790370883333468 1.0 11.491633977989153 -10.681002807338048 0.9737128728837378 1.0008550132766216 1.1205666109800119 0.22503438156511846 0.08943793484306249 0.6972823114678025 1.18959016617626 0.05662506210667074 0.01540981198154727 2.0844774087109042e-11 10.681002807338048 0.11971159770339024 DAQNSSDSS(ph)FEKNVEITEQLANGR ddPTM_A549_PD325901_60min_R1 1 DAQNSSDSSFEKNVEITEQLANGR 24 1 Q6PL18 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 DAQNS(0.018)S(0.084)DS(0.408)S(0.49)FEKNVEITEQLANGR 118.68 2.0286e-16 11331000.0 2823.9 2862.7 2981.4 3662.4 4277.6 4310.9 3125.3 3566.4 3275.3 3577.3 3559.7 True False 3110.580249154694 3103.949775646524 3183.7357326146266 3888.618130086113 3977.156132918879 4275.793459674337 3244.235001729781 3495.2653542133235 3137.6505311625606 3351.428667494163 3121.8794667974944 0.9963806361638966 0.9942567638047336 1.0198137905306721 1.245601622818308 1.2739621036678748 1.369621570963647 1.039192908065026 1.1196029159315553 1.0050517851610858 1.0735291682904549 1.0 11.608199121782393 -8.623657595729634 1.9370997565141281 1.0008816673431506 1.1431757679769137 0.12533172813275262 0.11835963355269342 0.3953253299219247 2.919426551799068 0.023160617000546658 0.026220525502643578 2.378714961999068e-09 8.623657595729634 0.14229410063376302 DAQQVEPEGQEKPS(ph)PATVR ddPTM_A549_MK2206_60min_R1 1 DAQQVEPEGQEKPSPATVR 19 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 DAQQVEPEGQEKPS(0.964)PAT(0.036)VR 48.771 0.0050658000000000005 3631100.0 3189.5 2338.6 2673.4 2867.2 3555.7 2881.6 3272.9 3003.8 3657.9 4169.9 3951.1 True False 3727.809624211763 2457.6247510317794 3052.5283196145224 3569.6641287135 3032.661240207307 3186.5289993487277 3867.543564896195 3429.597848751694 2829.3914904659946 3227.9166938786757 2969.932825187487 1.2551831450855904 0.8275017974107322 1.027810559796692 1.2019342991328945 1.0211211561715574 1.0729296542751154 1.302232674118494 1.1547728688224417 0.9526786149741887 1.0868652201501905 1.0 11.536214584757193 -8.76954329620908 24.967179848434444 0.9776537838076721 1.101466288080134 0.08008559890726541 0.1270909070351847 226.79256357517733 698718.111699028 0.021127180056026186 0.022682938506228382 1.7000304637074412e-09 8.76954329620908 0.12381250427246193 DAQRLS(ph)PIPEEVPK ddPTM_A549_MK2206_60min_R1 2 DAQRLSPIPEEVPK 14 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK 109.42 3.6889e-06 59289000.0 2576.9 2112.81 1957.9499999999998 1999.96 2545.4 2503.8 2593.2 2805.45 3267.5 3146.3 2775.5 True False 3011.817720843797 2220.343004458844 2235.6167514735007 2489.9502897816146 2170.97503187099 2768.7504541120725 3064.350873075502 3203.131128830294 2527.416467125302 2435.548644799749 2086.266750096902 1.4436398033491669 1.0642661128332294 1.0715872030121085 1.1934956494254452 1.0406028048762956 1.3271315635852754 1.4688202613271628 1.5353411200564437 1.2114541282929951 1.1674195759898027 1.0 11.026707917322328 -10.117408362449032 1.089985413572922 1.0255291087713563 1.2525148085597866 0.12179158229729925 0.16770225109489834 0.507437274910511 1.2068060428949763 0.06337684145389212 0.03240012795838506 7.631178945374267e-11 10.117408362449032 0.2269856997884303 DAQRLS(ph)PIPEEVPK ddPTM_A549_PD325901_60min_R1 2 DAQRLSPIPEEVPK 14 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK 128.94 3.1021e-09 173174000.0 8840.5 8213.3 8565.3 9369.099999999999 10848.0 8253.8 8766.3 9055.7 9125.9 9586.7 10403.7 True False 9737.98105196787 8905.463615578861 9146.592765333078 9947.808028230062 10086.073903568355 8186.583789338669 9099.906343603427 8875.076959440781 8742.370159172115 8981.39412592354 9124.11085448804 1.067280002103205 0.9760363237145865 1.0024640111462455 1.0902769800672527 1.1054308813671565 0.8972472956432557 0.9973471923707823 0.9727059546931345 0.9581613264674275 0.9843582864302552 1.0 13.155468259616457 -7.252772703800767 24.99877161281082 0.9753928818769575 1.0440689909874223 0.4557097268265542 0.04304056670600472 551.8078942185882 1591673.9115143581 0.006517751969478326 0.011171369172424134 5.587625571348624e-08 7.252772703800767 0.06867610911046484 DARDS(ph)RDIRDPR ddPTM_A549_MK2206_60min_R1 2 DARDSRDIRDPR 12 3 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 DARDS(1)RDIRDPR;DARDS(1)RDIRDPR 57.328 0.0042631 26340000.0 652.79 685.4200000000001 601.01 624.1700000000001 826.8499999999999 533.14 514.55 652.6800000000001 967.06 933.3299999999999 898.3499999999999 True False 762.9649928168044 720.3049503344741 686.2422553196396 777.0916780200564 705.2214603215714 589.5565209303102 608.0370745569184 745.1993887486698 748.0224540774886 722.4901047741636 675.2649018013157 1.129875091658907 1.0666998216744437 1.0162563661890929 1.150795304105264 1.0443626766922796 0.8730744325043809 0.9004422900330487 1.103566003150466 1.10774668146099 1.0699358175537799 1.0 9.399309762372926 -2.0675786653209145 0.8031036880827859 1.036045116493422 22.319440719860726 0.11797940570631127 0.08012614337181599 878.6091152845363 3.2027004063972497 0.01367345099895809 33997.17059887272 0.008558966660382257 2.0675786653209145 21.283395603367303 DARDS(ph)RDIRDPR ddPTM_A549_PD325901_60min_R1 2 DARDSRDIRDPR 12 3 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 DARDS(1)RDIRDPR;DARDS(1)RDIRDPR 57.136 0.0043828 35201000.0 964.74 824.48 734.51 802.09 1296.36 1099.21 773.5699999999999 1175.85 906.75 1221.8700000000001 1311.52 True False 1062.6796945959486 893.9618231128118 784.3582655674412 851.6332776214417 1205.3081457992141 1090.2583982019146 803.0086296637463 1152.39674931352 868.642450808064 1144.720919674361 1150.211354410273 0.9238994994452971 0.7772152654249849 0.6819253370782372 0.7404145980267115 1.0479014497445904 0.9478765741804931 0.698140064940898 1.0018999942009505 0.7552024655967922 0.995226586214038 1.0 10.167683269260369 -10.998217100579382 1.2254124695245523 1.0016549845641867 0.8327420995708362 0.20100433155325503 0.1187333930381416 0.6201027817333117 1.6299083411178923 0.0892278852327434 0.019517162059926818 1.0041137158235194e-11 10.998217100579382 -0.16891288499335044 DAS(ph)DGEDEKPPLPPR ddPTM_A549_MK2206_60min_R1 2 DASDGEDEKPPLPPR 15 1 O15357 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 DAS(1)DGEDEKPPLPPR;DAS(1)DGEDEKPPLPPR 62.203 0.0013772 11373500.0 1955.9499999999998 2612.9 1773.74 2122.6800000000003 2167.2 1862.09 1536.3899999999999 1865.2 2656.2 2795.8999999999996 3173.0 True False 2286.066541613733 2745.885449401752 2025.2830035284917 2642.736695290726 1848.4077508724802 2059.1351278446955 1815.532175645717 2129.597811935434 2054.574941079793 2164.304248163117 2385.0565296550044 0.9584957476644841 1.1512873658382181 0.8491551367218313 1.108039437401928 0.7749953629568059 0.8633485631229658 0.7612113813957825 0.8928919652246053 0.8614365804474181 0.9074435851950985 1.0 11.219807745478382 -6.750838165314411 24.999417281605115 0.9019356140522129 1.014383938035635 0.31382671454108213 0.09849458916893328 269.4843583186429 635484.0120042878 0.014960582091802477 0.030888386645507804 1.7748507347452425e-07 6.750838165314411 0.11244832398342208 DAS(ph)EETSTSVMQK ddPTM_A549_MK2206_60min_R1 1 DASEETSTSVMQK 13 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 DAS(1)EETSTSVMQK 136.24 1.8266e-08 3225700.0 2442.9 2780.5 2220.8 2424.2 3983.3 3348.0 2439.1 2944.7 4291.3 4119.3 4387.0 True False 2855.2017968292575 2922.0155735242715 2535.7428339193298 3018.129108826472 3397.361846645603 3702.2831377774633 2882.252897778213 3362.120242765535 3319.327401797949 3188.747269021902 3297.586824959504 0.8658458285974989 0.8861072440632871 0.7689692397865733 0.9152538717046627 1.0302569809325108 1.1227249908189845 0.874049130704423 1.0195698919335727 1.0065928747270245 0.9669941803764519 1.0 11.687194930579976 -6.560712463770575 4.608970602197951 1.004903578717294 0.8438273531424065 0.5776942169578136 0.06134281663899513 0.09714596320851128 4.747317931951221 0.00807129466017918 0.01760694343119333 2.749714072014598e-07 6.560712463770575 -0.16107622557488743 DAS(ph)EETSTSVMQK ddPTM_A549_PD325901_60min_R1 2 DASEETSTSVMQK 13 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 DAS(0.878)EET(0.118)S(0.001)T(0.003)SVMQK;DAS(0.614)EET(0.291)S(0.013)T(0.082)SVMQK 143.25 8.121100000000001e-13 12802100.0 5603.5 6844.0 6603.700000000001 6746.799999999999 8202.0 6699.200000000001 6118.4 6963.5 6702.200000000001 7281.1 7301.7 True False 6172.363194921322 7420.767899020089 7051.866793274038 7163.534512905461 7625.91981536391 6644.643936312678 6351.239060116946 6824.607529739932 6420.529841528322 6821.370103399701 6403.637189289902 0.963883963514456 1.1588364049467605 1.101228346457276 1.1186665173483734 1.1908731850265155 1.037635915324163 0.9918174425527118 1.0657392553647642 1.0026379777209542 1.0652336948146373 1.0 12.6446758560953 -7.503359078440373 19.130670868094874 1.0068552714572065 1.1103854883864974 0.29382229298659046 0.05847079040501627 24.535525687680458 24045.972491286015 0.0077182203643738475 0.012180866237298802 3.1379131672285165e-08 7.503359078440373 0.10353021692929087 DAS(ph)ISK ddPTM_A549_MK2206_60min_R1 1 DASISK 6 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 DAS(0.998)IS(0.002)K 71.501 0.049423 4786600.0 2033.5 1658.8 1878.6 1332.2 1672.6 1762.9 1324.0 2010.7 2026.8 2812.0 3264.9 True False 2376.7050856982664 1743.2258346923425 2145.013728296492 1658.5890598047301 1426.562755679822 1949.448907881689 1564.5536618664064 2295.722882510497 1567.7330361345253 2176.7672469811814 2454.135223344038 0.9684491152283515 0.7103218347997138 0.8740405613728437 0.675834421847674 0.581289385405572 0.794352686575006 0.6375173001814156 0.935450850740944 0.6388128173305426 0.8869793425706546 1.0 11.260999028639725 -10.962155649625577 1.1664469669455737 1.0032249967194657 0.743691997506504 0.22852705840709608 0.12495349238382236 0.40954477342811324 0.9700228897877747 0.0873151620891291 0.019212095821590097 1.091049238132258e-11 10.962155649625577 -0.2595329992129617 DAS(ph)ISKGDFQNPGDQEWLK ddPTM_A549_MK2206_60min_R1 2 DASISKGDFQNPGDQEWLK 19 1 Q1RLN5;Q8IWW6-3 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 DAS(0.845)IS(0.155)KGDFQNPGDQEWLK;DAS(0.749)IS(0.251)KGDFQNPGDQEWLK 83.245 4.0783e-05 5802200.0 3148.2 3770.6000000000004 3329.3 2830.3 6502.1 4770.4 4076.1000000000004 4274.2 6263.1 5188.8 5677.1 True False 3679.539193899817 3962.5074344652453 3801.4448023089103 3523.7236270569956 5545.649703279786 5275.2005616647575 4816.674608106995 4880.0809391885205 4844.517850115521 4016.646476221892 4267.319390010851 0.8622600882683076 0.9285706253300083 0.89082734496216 0.8257464007277027 1.2995628394399803 1.2361860173890906 1.1287354350326113 1.1435940207831763 1.1352601967070484 0.94125752237441 1.0 12.05911437859473 -6.735447652755144 24.99913761433918 1.1032199204604314 0.8815435986069647 0.6020699117430806 0.09639286817512713 139.8405977126614 134499.60035135067 0.01445468496671584 0.03008181455885384 1.838875587510269e-07 6.735447652755144 -0.22167632185346664 DAS(ph)ISKGDFQNPGDQEWLK ddPTM_A549_PD325901_60min_R1 2 DASISKGDFQNPGDQEWLK 19 1 Q1RLN5;Q8IWW6-3 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 DAS(0.5)IS(0.5)KGDFQNPGDQEWLK;DAS(0.972)IS(0.028)KGDFQNPGDQEWLK 125.58 2.4252e-15 9829800.0 5297.299999999999 5443.6 6011.700000000001 5451.0 5320.1 6232.5 5725.299999999999 6540.3 7137.2 6361.9 8799.9 True False 5835.077996333847 5902.351276315862 6419.690113288836 5787.695889880787 4946.434529348637 6181.744586378788 5943.17942450437 6409.848585733905 6837.248304281569 5960.208548271349 7717.568087162198 0.7560772940947833 0.7647941954842146 0.8318281148653137 0.7499377815024839 0.6409317641883577 0.8009964429937225 0.7700844822335371 0.830552903886443 0.885933007271423 0.7722910223734687 1.0 12.913930590533319 -9.0688521593685 0.6645307319194846 0.9821246753509534 0.7516614189891603 0.194296672913426 0.07748576851045949 0.1989716126065826 0.19305102128970755 0.015915102625703482 0.013027249806151487 8.533905720693905e-10 9.0688521593685 -0.2304632563617931 DAS(ph)PSKEER ddPTM_A549_MK2206_60min_R1 6 DASPSKEER 9 1 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DAS(0.968)PS(0.032)KEER;DAS(0.593)PS(0.407)KEER;DAS(0.915)PS(0.085)KEER;DAS(0.969)PS(0.031)KEER;DAS(0.983)PS(0.017)KEER;DAS(0.962)PS(0.038)KEER 110.44 0.00030032 772383900.0 26603.199999999997 28497.0 23000.199999999997 15665.0 3799.32 2348.594 2638.64 3024.64 5215.83 37399.4 39830.799999999996 True False 31093.1697742061 29947.375579471733 26261.974211415414 19502.925703228564 3240.4450609287705 2597.120658209477 3118.046732890616 3453.3919825715166 4034.452832968984 28950.84956498863 29939.71308584388 1.0385259766870512 1.0002559307634606 0.8771618530917927 0.6514065664994617 0.10823233514755759 0.08674500823581538 0.1041441754618849 0.11534485893935811 0.13475255495606459 0.9669715097796711 1.0 14.869772775574585 -10.994393678000824 1.3131402285133662 0.9954748594474365 0.4170089507916097 0.22928665401919435 0.3653284124224074 0.5660696733612703 1.7590856659069505 0.2849108953252437 0.06734361100082635 1.0129927147280167e-11 10.994393678000824 -0.5784659086558268 DAS(ph)PSKEER ddPTM_A549_PD325901_60min_R1 7 DASPSKEER 9 1 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DAS(0.624)PS(0.376)KEER;DAS(0.896)PS(0.104)KEER;DAS(0.964)PS(0.036)KEER;DAS(0.984)PS(0.016)KEER;DAS(0.978)PS(0.022)KEER;DAS(0.921)PS(0.079)KEER;DAS(0.885)PS(0.115)KEER 127.78 1.4482000000000001e-05 1711568400.0 32254.92 31614.59 32566.25 29792.180000000004 33193.5 29118.6 23970.79 27150.579999999998 34287.729999999996 34126.479999999996 35129.950000000004 True False 35529.41573358291 34278.86245071325 34776.39156177 31632.37529565007 30862.10307135843 28881.467775841076 24883.011530769614 26609.04038268202 32846.73594689293 31971.728228738477 30809.188857101064 1.1532084112429952 1.1126181416104526 1.1287668663744956 1.026718861128318 1.0017174815767722 0.937430320213845 0.8076490311439811 0.8636722150037723 1.0661343957882954 1.0377335273911135 1.0 14.91107307921842 -6.349499846534881 2.590414309036114 0.9930163296370095 1.133201794404322 0.4657876389181892 0.07540445772761073 0.27592932747833004 3.5829136077715127 0.013023570065532794 0.03572008420842798 4.4719830981362204e-07 6.349499846534881 0.14018546476731253 DAS(ph)PTPS(ph)TDAEYPANGSGADR ddPTM_A549_MK2206_60min_R1 1 DASPTPSTDAEYPANGSGADR 21 0 O43639;E9PEE2;E7EPF5 O43639 NCK2 Cytoplasmic protein NCK2 2 DAS(0.986)PT(0.02)PS(0.521)T(0.473)DAEYPANGS(0.001)GADR 58.577 0.0040524 2877100.0 0.0 0.0 0.0 179.86 140.45 243.58 0.0 0.0 225.91 0.0 162.08 True False 0.0 0.0 0.0 223.92570807422229 119.78999105298995 269.3554739246818 0.0 0.0 174.74174570413976 0.0 121.83106281956614 0.0 0.0 0.0 1.8380017615528812 0.9832467047455783 2.2108932458678603 0.0 0.0 1.4342955044472954 0.0 1.0 6.928738208587159 -6.232923762316914 22.631816125665217 1.1269264633231089 5.685723368713784e-07 0.2216153150035589 0.7148891963348769 179.43227808863978 142407.5229446997 0.08753833571638026 0.23151869664382851 5.848927494011922e-07 6.232923762316914 -1.126925894750772 DAS(ph)PTPS(ph)TDAEYPANGSGADR ddPTM_A549_PD325901_60min_R1 2 DASPTPSTDAEYPANGSGADR 21 0 O43639;E9PEE2;E7EPF5 O43639 NCK2 Cytoplasmic protein NCK2 2 DAS(0.924)PT(0.077)PS(0.86)T(0.139)DAEY(0.001)PANGSGADR;DAS(0.977)PT(0.18)PS(0.42)T(0.419)DAEY(0.003)PANGS(0.001)GADR 99.40899999999999 2.5978e-07 10607500.0 2491.84 2292.82 3489.2 2466.0 3636.9 2631.55 3142.93 3437.2 2371.82 2847.79 3199.5 True False 2744.809762404346 2486.0439880524896 3725.9980942640896 2618.3192193076543 3381.4566906238697 2610.1195292876237 3262.535921027288 3368.6423495687636 2272.1406536262284 2667.9800533931166 2805.981783301567 0.9781994233671594 0.8859800882696277 1.3278767939398437 0.9331205337430575 1.2050886113184915 0.9301983159051417 1.162707448937367 1.2005218172176302 0.809748896855912 0.9508187363404494 1.0 11.454289927538003 -8.766234584763689 24.99999642804688 0.9101592057626698 1.0772016956284807 0.20435850793788413 0.13825390348313266 129.06456098745167 672881.7525655894 0.023823979358072424 0.025760080034469116 1.7130317610937516e-09 8.766234584763689 0.16704248986581083 DAS(ph)PTPSTDAEYPANGSGADR ddPTM_A549_MK2206_60min_R1 2 DASPTPSTDAEYPANGSGADR 21 0 O43639;E9PEE2;E7EPF5 O43639 NCK2 Cytoplasmic protein NCK2 1 DAS(0.925)PT(0.074)PS(0.001)TDAEYPANGSGADR;DAS(0.883)PT(0.1)PS(0.015)T(0.002)DAEYPANGSGADR 177.6 1.5457e-35 20458800.0 854.06 1235.67 1284.8 853.4100000000001 1334.77 1233.19 1082.26 1212.71 1580.78 1472.55 2071.83 True False 998.2044482377488 1298.5603250266984 1467.003959392811 1062.4954883110313 1138.4271011591272 1363.6853472747289 1278.8926329996498 1384.615356268614 1222.7358539869417 1139.8999322696088 1557.3374314009227 0.640968635384177 0.8338336309418581 0.9419949266056933 0.6822513007699622 0.731008629346975 0.8756518142943552 0.8212045811094424 0.8890914251146367 0.7851451004340235 0.7319543660131493 1.0 10.604865854554843 -14.999999976765363 0.23053666036084705 2.1225124229739323 0.77685957073457 0.0 0.11650014960474321 30.385816667091127 0.3806394191076407 15.483767861841143 0.050504417015419044 1.000000053499731e-15 14.999999976765363 -1.3456528522393623 DAS(ph)PTPSTDAEYPANGSGADR ddPTM_A549_PD325901_60min_R1 2 DASPTPSTDAEYPANGSGADR 21 0 O43639;E9PEE2;E7EPF5 O43639 NCK2 Cytoplasmic protein NCK2 1 DAS(0.999)PT(0.001)PSTDAEYPANGSGADR;DAS(0.972)PT(0.027)PSTDAEYPANGSGADR 268.3 6.328799999999998e-112 25077000.0 3041.5299999999997 2597.41 2199.25 3284.0 3334.9 2804.38 2740.81 3085.0 2925.6000000000004 2626.2 3572.1 True False 3350.303886543955 2816.302856311188 2348.5043301645933 3486.8452214948647 3100.668128780429 2781.5420590692247 2845.1130243787798 3023.4672548643202 2802.647206048052 2460.381283809905 3132.754345407569 1.0694435366294521 0.8989861782299401 0.7496611834909305 1.1130286122199053 0.9897578255140955 0.887890256427798 0.9081826120677307 0.9651146950914115 0.8946271865065212 0.7853731932146795 1.0 11.613215930031057 -11.069755715645613 1.3974763672114736 0.9998546187451777 0.9339565319078962 0.0 0.11229370059779248 1.0425458269056955 3.6469270575681687 0.06369389221439943 0.014207538142473443 8.516169256893231e-12 11.069755715645613 -0.06589808683728149 DASEET(ph)STSVMQK ddPTM_A549_MK2206_60min_R1 2 DASEETSTSVMQK 13 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 DAS(0.145)EET(0.818)S(0.036)T(0.002)SVMQK;DAS(0.051)EET(0.918)S(0.015)T(0.015)SVMQK 151.98 2.0347000000000002e-13 10949600.0 4310.7 4802.4 4437.6 3605.4 5958.1 4581.5 3989.8999999999996 4655.9 6378.5 6501.4 6622.0 True False 5038.240773503574 5046.821647291122 5066.9184076911115 4488.723161852557 5081.671382647347 5066.311289046432 4714.813183897865 5315.888083095744 4933.779934371452 5032.7292245816 4977.5746420975265 1.012187889839555 1.0139117964415727 1.017949256820373 0.9017892215798153 1.0209131450625428 1.0178272860437734 0.9472109456727433 1.067967527425295 0.99120159698748 1.0110806138430566 1.0 12.281227234957745 DASPS(ph)KEER ddPTM_A549_MK2206_60min_R1 2 DASPSKEER 9 1 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DAS(0.387)PS(0.613)KEER;DAS(0.445)PS(0.555)KEER 69.45100000000001 0.0011163 456354000.0 15355.4 14908.4 11868.5 8074.0 2919.5 1783.1799999999998 1927.1100000000001 2119.38 3146.7 20464.9 22008.3 True False 17947.01611651398 15667.173881075074 13551.631765296997 10052.130362455631 2490.0454174382635 1971.8749240209145 2277.240942084118 2419.8086053290367 2433.97747424734 15841.86487650967 16543.031711820444 1.0848686280212079 0.9470557848160597 0.8191746229691375 0.6076353196659299 0.15051929179698414 0.11919670821956754 0.13765559915217765 0.14627358802679546 0.14713007365561642 0.9576155781162063 1.0 14.013936029705855 -6.15099108279352 2.1724423373967072 0.4554695940732946 1.012446246542688 0.3836687149610212 0.311182491138797 0.36236481677117527 3.2762341620340707 0.05714782387477597 0.19784400969492738 7.063320569665327e-07 6.15099108279352 0.5569766524693933 DASPS(ph)KEER ddPTM_A549_PD325901_60min_R1 2 DASPSKEER 9 1 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DAS(0.407)PS(0.593)KEER;DAS(0.309)PS(0.691)KEER 73.082 0.00065767 1320096000.0 12602.5 12330.5 13693.9 12710.2 13674.2 11841.0 9291.099999999999 11550.1 14412.8 14563.3 15259.9 True False 13881.896522529845 13369.634508893507 14623.25040211022 13495.280187041422 12713.771365429053 11744.57082187104 9644.677894784996 11319.724194621831 13807.080137862113 13643.770752611674 13383.029040476185 1.0372761263944705 0.9989991405127966 1.0926712000611414 1.0083875740107668 0.949992062856398 0.8775719447630485 0.7206647961097024 0.8458267676462473 1.0316857339323864 1.0194830117566727 1.0 13.708117064071248 -6.560704532010188 5.419149876540013 0.9655551633186847 1.0405675613551766 0.17095163080940723 0.09304896970329621 0.37956720137574784 28.04431439901063 0.015964159478520874 0.03421842754308408 2.7497642920225125e-07 6.560704532010188 0.07501239803649185 DASPTPS(ph)T(ph)DAEYPANGSGADR ddPTM_A549_MK2206_60min_R1 1 DASPTPSTDAEYPANGSGADR 21 0 O43639;E9PEE2;E7EPF5 O43639 NCK2 Cytoplasmic protein NCK2 2 DAS(0.118)PT(0.254)PS(0.825)T(0.8)DAEY(0.003)PANGSGADR 71.241 0.0009146000000000001 4103600.0 541.35 284.2 361.64 0.0 458.07 738.61 675.52 247.2 776.2 529.51 836.85 True False 632.7166452632192 298.66456608365337 412.9259899399252 0.0 390.6885098016596 816.769219950362 798.2532399274886 282.2413570182498 600.3919393366972 409.8933232393337 629.0370491149675 1.0058495698360355 0.47479646310795787 0.6564414457318487 0.0 0.6210898234870971 1.2984437420649972 1.2690083057120438 0.44868797062963656 0.954461967194821 0.6516203200050599 1.0 9.297001181442615 -7.0209559216060615 24.19048062656763 0.9773193384911351 0.5102244375614088 0.26561524726745644 0.3167130885443002 413.8410207315752 477717.93548578845 0.042638137263965335 0.07441528627756518 9.528928722659781e-08 7.0209559216060615 -0.4670949009297263 DASSGKENRS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 DASSGKENRSPSR 13 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 DAS(0.001)S(0.001)GKENRS(0.98)PS(0.018)R;DASSGKENRS(0.941)PS(0.059)R 84.14 8.2137e-05 19097700.0 3219.6000000000004 3008.7 3186.8 3031.3 2284.4 1713.07 1655.78 1885.43 2143.31 4744.8 4935.299999999999 True False 3762.98976833742 3161.8299788032637 3638.7361595524653 3773.968636080229 1948.367786126382 1894.3459303561663 1956.6137932365239 2152.69547638721 1657.8537071627632 3672.946384593284 3709.728802649336 1.0143571049317803 0.8523075801511999 0.9808631177982146 1.0173165848093844 0.5252049111339184 0.5106426995427003 0.5274277170447582 0.5802837864724352 0.44689350498580704 0.9900848768163906 1.0 11.857098008065098 -6.749846434140372 24.996987831278563 0.6748675865222206 0.9591217515383605 0.40745673144378824 0.17975190055121154 241.74742410205022 521258.13176746963 0.03257706858129342 0.06736908276332211 1.7789083180821937e-07 6.749846434140372 0.28425416501614 DASSGKENRS(ph)PSR ddPTM_A549_PD325901_60min_R1 4 DASSGKENRSPSR 13 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 DAS(0.001)S(0.002)GKENRS(0.995)PS(0.003)R;DAS(0.001)S(0.004)GKENRS(0.885)PS(0.11)R;DAS(0.001)S(0.001)GKENRS(0.985)PS(0.014)R;DASSGKENRS(0.869)PS(0.131)R 97.579 3.3466e-05 154469000.0 12304.900000000001 12187.2 11304.4 12167.1 13556.599999999999 11407.7 11833.400000000001 13483.0 13434.5 13696.1 14519.2 True False 13554.084389611386 13214.258114982125 12071.584562879441 12918.634133511008 12604.43118373108 11314.799473410887 12283.726512484945 13214.070987791123 12869.894684732213 12831.325908608944 12733.43044479202 1.0644487711600932 1.037761047368564 0.9480229711245429 1.014544681381971 0.989869245242259 0.888590040403342 0.9646832065988153 1.0377463516279453 1.0107170051724754 1.0076880667971893 1.0 13.636333519839496 -5.54033364277574 19.66957544745182 0.993620769799367 1.0577770430319686 0.2870663648434033 0.039222353985916995 17.336253177152322 19536.751371623242 0.005544302225844144 0.02150984544195306 2.881816723072715e-06 5.54033364277574 0.06415627323260165 DASSS(ph)PASTASSASSTSLK ddPTM_A549_MK2206_60min_R1 2 DASSSPASTASSASSTSLK 19 0 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 DASS(0.04)S(0.959)PASTASSASSTSLK;DASS(0.025)S(0.965)PAS(0.01)TASSASSTSLK 215.15 2.2847999999999997e-66 78298000.0 3753.8 4570.4 4645.6 3487.3999999999996 5830.0 3981.4 3465.0 4421.6 6723.299999999999 5611.3 5549.700000000001 True False 4387.3496684013535 4803.0138382432415 5304.4159353636705 4341.813156555335 4972.4147229543005 4402.709105360576 4094.5456483135185 5048.3753405820935 5200.483284903913 4343.703432782896 4171.55632607198 1.0517296964158622 1.1513721649219235 1.2715676166737544 1.0408137436426927 1.191980722369012 1.0554116404575207 0.9815391015393585 1.2101899017951756 1.2466530182994775 1.04126687817566 1.0 12.026370010062115 -11.109302028223853 1.477324343917987 1.0005768520832563 1.1477726434079172 0.17297517329461454 0.08996048002095769 0.4675313592254269 1.8366302967770722 0.06653029365182804 0.014700045651395972 7.774956569799254e-12 11.109302028223853 0.14719579132466087 DASSS(ph)PASTASSASSTSLK ddPTM_A549_PD325901_60min_R1 2 DASSSPASTASSASSTSLK 19 0 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 DASS(0.008)S(0.992)PASTASSASSTSLK;DAS(0.001)S(0.054)S(0.943)PAS(0.002)TASSASSTSLK 387.95 0.0 116546000.0 27686.0 26369.0 25116.0 25663.0 34568.0 32066.0 28617.0 30681.0 31369.0 32225.0 31736.0 True False 30496.66233864403 28591.208172013565 26820.52279477725 27248.145225098266 32140.062933125988 31804.86512744841 29706.03559482327 30069.043386221132 30050.67001863596 30190.308000447083 27832.67319107939 1.095714455067811 1.0272534001936002 0.963634452596291 0.9789984971271652 1.1547601882318352 1.1427168676576185 1.0673080300581514 1.080350535494324 1.0796903988463262 1.0847074513174442 1.0 14.764491858621556 -5.243298669691308 22.14277002719495 1.047925965741683 1.0957146296359217 0.0075226034384867635 0.059366389146947786 2233.2469954505864 2725709.646857723 0.008783119346232254 0.3249995858634901 5.710857588480866e-06 5.243298669691308 0.04778866389423864 DASVPLIDVTNLPT(ph)PR ddPTM_A549_MK2206_60min_R1 2 DASVPLIDVTNLPTPR 16 0 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 DASVPLIDVT(0.029)NLPT(0.971)PR;DASVPLIDVT(0.043)NLPT(0.957)PR 80.706 0.00029246 16101100.0 1235.6 1487.96 1192.6 1118.78 1873.3200000000002 1227.42 1144.23 1247.6100000000001 2387.0 2064.54 2284.2 True False 1444.1390724803432 1563.6908084089814 1361.7286129918007 1392.8811502239428 1597.7571095719986 1357.3047697045447 1352.1217798469786 1424.4625381453823 1846.348311255729 1598.158980114697 1716.970099287099 0.8410973918998138 0.9107268723306478 0.7930997829008218 0.8112436849088283 0.9305678125876515 0.7905232422324125 0.7875045584127478 0.8296373587034693 1.0753526296249125 0.9308018705615587 1.0 10.745649199956802 -8.755702659591934 24.999848766035832 1.0355831897680698 0.8368955826623158 0.6143166213083939 0.056639815319676816 46.471169891596844 202514.89755988453 0.008618447665154289 0.009643283153183572 1.7550817100756885e-09 8.755702659591934 -0.19868760710575406 DASVPLIDVTNLPT(ph)PR ddPTM_A549_PD325901_60min_R1 2 DASVPLIDVTNLPTPR 16 0 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 DASVPLIDVT(0.005)NLPT(0.995)PR;DASVPLIDVTNLPT(1)PR 131.18 4.5166000000000007e-10 27111000.0 2595.6 2495.7 2523.6 2354.16 2781.2 2624.5 2728.2 2569.8 2994.1 2778.5 2708.7 True False 2859.1034012202717 2706.021397659912 2694.8666716395896 2499.571116514723 2585.85810661913 2603.1269421502 2832.0231439283225 2518.5433230309004 2868.268389263221 2603.0650358182224 2375.5470718640254 1.2035557767233858 1.1391150399459662 1.134419394823864 1.052208624328955 1.08853162172454 1.0958010358883772 1.192156188976762 1.0601950821604516 1.2074138303698485 1.0957749760671633 1.0 11.214044078938507 -11.034857676877547 1.3269602459081047 0.9999366720491861 1.1352520238434376 0.16687399005615766 0.058317006328489 0.3239828096140303 1.0158838988418262 0.03915960495069249 0.00876979346802992 9.228738135971132e-12 11.034857676877547 0.13531535179425147 DATNRS(ph)PTQIVK ddPTM_A549_MK2206_60min_R1 2 DATNRSPTQIVK 12 1 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 DAT(0.033)NRS(0.92)PT(0.048)QIVK;DAT(0.135)NRS(0.857)PT(0.007)QIVK 114.27 8.0744e-06 50875000.0 11384.2 11799.3 9270.3 9596.7 14839.5 10496.2 10432.8 10121.8 15155.4 14979.1 16829.9 True False 13305.57464303231 12399.83397111489 10584.96793645639 11947.891930812235 12656.629207766788 11606.900917186334 12328.304715649425 11556.596146712462 11722.726098200694 11595.310906563234 12650.57134838978 1.0517765780377897 0.9801797586551847 0.8367185674822262 0.9444547287054363 1.0004788605360326 0.9175001347795815 0.9745255274354565 0.9135236526833578 0.9266558620447458 0.9165839697856126 1.0 13.626914923589542 -10.897614534251518 1.168880497328196 0.999773427744131 0.9456298003586415 0.0 0.05788820217331224 0.8232345788714241 2.0111138498072947 0.03548053694174229 0.008627524659583795 1.2658593848970124e-11 10.897614534251518 -0.0541436273854895 DATNRS(ph)PTQIVK ddPTM_A549_PD325901_60min_R1 1 DATNRSPTQIVK 12 1 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 DAT(0.178)NRS(0.732)PT(0.09)QIVK 40.639 0.028919 43105000.0 9038.2 8843.4 8457.2 9175.7 10521.0 9803.6 8839.0 9715.1 10182.0 10236.0 10292.0 True False 9955.751410428824 9588.664353914995 9031.156449274979 9742.462149473327 9782.041255479602 9723.762731973216 9175.372981886394 9521.324709151484 9754.085948858787 9589.697213113315 9026.149246363408 1.1029898951028256 1.062320607847053 1.000554744085756 1.0793597450649866 1.0837446831959643 1.0772880512573924 1.0165323806919222 1.0548601013868213 1.08064753668777 1.0624350375080445 1.0 13.139894918210075 -10.891563459027596 1.0398317829075892 0.9985201438281768 1.0618222383173643 0.0 0.033744873989036 0.47137414032531705 0.8694772254205335 0.022690649171463732 0.004938987724954275 1.2836201944283687e-11 10.891563459027596 0.06330209448918755 DATNRSPT(ph)QIVK ddPTM_A549_PD325901_60min_R1 1 DATNRSPTQIVK 12 1 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 DAT(0.006)NRS(0.304)PT(0.691)QIVK 61.165 0.003288 40916000.0 9323.4 11598.0 9770.1 10097.0 11577.0 11017.0 10481.0 10642.0 12000.0 12652.0 10858.0 True False 10269.904704475677 12575.404163184534 10433.157738384029 10720.668758049214 10763.87145848183 10927.281204674715 10879.86019042327 10429.7369615125 11495.681731124088 11853.150560796177 9522.534834533017 1.0784843408744864 1.3205941885957122 1.0956282040102054 1.125820902137446 1.1303577929111024 1.1475181130393404 1.142538240024912 1.0952689743585458 1.2072081573737645 1.2447474088318684 1.0 13.217129945005558 -10.917468233708533 1.085727792834294 0.9970274020803831 1.1543911979923822 0.0 0.09602180036220914 0.38148095713695634 0.7734078395356417 0.04697851397613518 0.010281894579672324 1.2092936329943453e-11 10.917468233708533 0.15736379591199912 DATNVGDEGGFAPNILENK ddPTM_A549_MK2206_60min_R1 2 DATNVGDEGGFAPNILENK 19 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 216.71 4.701899999999999e-66 14510300.0 3039.6 3515.1 3504.5 3458.2 4853.700000000001 3732.9 3336.0 3572.0 4990.5 5537.1 4490.700000000001 False True 3552.6101689149027 3694.00357579398 4001.490796771563 4305.459155244496 4139.727159657513 4127.913000301523 3942.1080181165635 4078.341938791213 3860.1597181909124 4286.265264317035 3375.5352529851057 1.0524583222092565 1.0943460218723065 1.1854388998701473 1.2754893172681356 1.2263913274188456 1.2228913908249257 1.1678467924843674 1.2082059979034705 1.1435696649226923 1.269803140265396 1.0 11.720900570707103 -10.098408096932504 0.7086388118152528 1.0042335842992738 1.182297097423253 0.0 0.09801358813808914 0.4060382728929309 0.3992456094952501 0.0364150820421533 0.013816745953327408 7.972451814876008e-11 10.098408096932504 0.17806351312397917 DATNVGDEGGFAPNILENK ddPTM_A549_PD325901_60min_R1 2 DATNVGDEGGFAPNILENK 19 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 272.95 4.9399999999999986e-111 26058000.0 5678.6 6034.0 6725.5 6837.8 7490.6 6639.6 7235.400000000001 6794.7 7470.9 7431.7 7665.700000000001 False True 6255.08729163563 6542.506356324843 7181.93287371693 7260.155376229469 6964.486097167141 6585.529298952368 7510.747106362805 6659.174378160965 7156.924053754584 6962.461193698146 6722.867496876015 0.930419541147025 0.9731719923626366 1.068284162532466 1.0799194509787855 1.035939812944908 0.9795714852349141 1.1171939815641023 0.9905259000352681 1.0645641992914878 1.0356386165476956 1.0 12.714860999978434 -5.575527107436282 4.719315226865275 1.0362272937116042 0.9389681440216688 0.4446856747194242 0.039365591558434096 0.12765905888779322 5.885904578079389 0.005457798393492606 0.024099652993926926 2.657497670870527e-06 5.575527107436282 -0.09725914968993532 DAVSS(ph)PQKR ddPTM_A549_MK2206_60min_R1 1 DAVSSPQKR 9 1 O00472;D6RC27 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 DAVS(0.096)S(0.904)PQKR 78.655 0.0019539 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DAVTYTEHAK ddPTM_A549_MK2206_60min_R1 4 DAVTYTEHAK 10 0 P62805 P62805 HIST1H4A Histone H4 0 ;;; 181.62 6.757000000000001e-14 276349400.0 10755.04 11649.92 11169.92 10667.43 12869.869999999999 10243.9 11296.49 10319.470000000001 17198.73 15539.078 15832.869999999999 False True 12570.22781651747 12242.851167168448 12753.98261682825 13280.950828879133 10976.729171613692 11327.902698649508 13348.916008864982 11782.286474551442 13303.245115728214 12028.789487441625 11901.131414017907 1.0562212431089921 1.0287132156820016 1.0716613549704863 1.1159401881098454 0.9223265242399226 0.9518340991770569 1.1216510048062978 0.9900139797358692 1.1178134794863963 1.010726549349195 1.0 13.538811113402122 -13.001291224419937 15.393347059280716 0.3548549667881966 1.0455543506855154 0.0 0.06563447046062959 0.0 0.0 0.0 0.008921282695012623 9.970312613445801e-14 13.001291224419937 0.6906993838973188 DAVTYTEHAK ddPTM_A549_PD325901_60min_R1 2 DAVTYTEHAK 10 0 P62805 P62805 HIST1H4A Histone H4 0 ; 187.42 3.6753e-14 554910000.0 11848.3 12249.4 11340.7 12594.6 13255.4 12429.099999999999 12790.5 13276.7 12278.5 14076.4 14765.5 False True 13051.130693742547 13281.699927273037 12110.348099169083 13372.539837588063 12324.386432647485 12327.881530454968 13277.249476730161 13011.885803130335 11762.477344633928 13187.61370170654 12949.437106216372 1.0078531280311294 1.0256584759886715 0.9352026655549001 1.032673445795461 0.951731440645491 0.9520013440998893 1.025314796915491 1.0048225028162796 0.908338891347436 1.0183928145707455 1.0 13.66060176690375 -5.059371073579381 0.4486417822635046 0.9629467919939443 1.061340249821673 0.0 0.042313866837225315 9.409968424468671 1.1009358790751615 0.009758952761079347 0.5099863626237523 8.72225795342795e-06 5.059371073579381 0.09839345782772879 DCDPGS(ph)PR ddPTM_A549_MK2206_60min_R1 5 DCDPGSPR 8 0 Q00341;A0A024R4E5;Q00341-2;H0Y394 Q00341 HDLBP Vigilin 1 DCDPGS(1)PR;DCDPGS(1)PR;DCDPGS(1)PR;DCDPGS(1)PR;DCDPGS(1)PR 140.11 0.0010946 496911420.0 9433.21 10899.25 8717.039999999999 7709.59 9712.02 7417.52 5885.509999999999 6989.38 9372.15 11551.3 12586.800000000001 True False 11025.305228158226 11453.975270539257 9953.24734914812 9598.439896096652 8283.394723435094 8202.437043048718 6954.83098372459 7980.146019078535 7249.372989248169 8941.853307273734 9461.150181992316 1.1653239845133219 1.210632433711912 1.0520124041675638 1.0145108904798534 0.8755166722964742 0.866959818338013 0.7350936038370813 0.8434646808870427 0.7662253372794052 0.9451127120139182 1.0 13.207799865794296 -6.284873508769655 1.3822022960480125 0.8684958849974631 1.1915247878661062 0.746754011497107 0.07356706583348686 0.22902560993569895 0.8025016475646356 0.014593034362094899 0.0596851168566682 5.189511649864141e-07 6.284873508769655 0.32302890286864305 DCDPGS(ph)PR ddPTM_A549_PD325901_60min_R1 5 DCDPGSPR 8 0 Q00341;A0A024R4E5;Q00341-2;H0Y394 Q00341 HDLBP Vigilin 1 DCDPGS(1)PR;DCDPGS(1)PR;DCDPGS(1)PR;DCDPGS(1)PR;DCDPGS(1)PR 131.22 0.0010674 411040990.0 7822.46 8820.550000000001 9192.42 7451.21 7200.22 6159.089999999999 7528.160000000001 8245.47 5029.639999999999 7791.22 9027.88 True False 8616.590380609308 9563.888704222914 9816.27289971199 7911.4543187742875 6694.501386610525 6108.932413079783 7814.648248367223 8081.007632403922 4818.261721844248 7299.281039542079 7917.507992446484 1.08829576033643 1.2079417808415378 1.2398185021192247 0.9992354066862993 0.8455313708552311 0.7715726234703987 0.9870085708562097 1.020650391526402 0.6085578601803748 0.9219164725196096 1.0 12.950830703266305 -6.529134797933576 3.01348035662532 0.8386456423413209 1.1801919662296458 0.5244759920752484 0.12048453402559456 0.17291925037585698 3.1981318669939176 0.022940731909601515 0.054545082408978665 2.957094490130631e-07 6.529134797933576 0.34154632388832495 DCDPGS(ph)PRR ddPTM_A549_MK2206_60min_R1 3 DCDPGSPRR 9 1 Q00341;A0A024R4E5;Q00341-2;H0Y394 Q00341 HDLBP Vigilin 1 DCDPGS(1)PRR;DCDPGS(1)PRR;DCDPGS(1)PRR 69.346 0.0016944000000000002 103239000.0 3343.01 3650.79 3216.69 2663.2 3911.9100000000003 3254.5400000000004 2799.36 2735.56 4477.89 3965.71 4503.93 True False 3907.2283592525996 3836.5996172151304 3672.8650110050307 3315.684119555592 3336.4732210758416 3598.933262611193 3307.96747649724 3123.3340073011436 3463.6550647209547 3069.8533566947867 3385.47987885568 1.1541135966146325 1.1332513423508908 1.0848875617144382 0.979383791427619 0.9855244575264163 1.0630496684055504 0.9771044563453026 0.9225675883670755 1.0230913160505029 0.9067705219185713 1.0 11.725144629474537 -6.010891789418171 2.7746452542059363 1.0026715707324112 1.1444731757451796 0.6631000883643772 0.04436653011155963 0.10363377970572864 1.5883207281040408 0.004868622605502391 0.017102290459532002 9.752326003738125e-07 6.010891789418171 0.1418016050127684 DCDPGS(ph)PRR ddPTM_A549_PD325901_60min_R1 4 DCDPGSPRR 9 1 Q00341;A0A024R4E5;Q00341-2;H0Y394 Q00341 HDLBP Vigilin 1 DCDPGS(1)PRR;DCDPGS(1)PRR;DCDPGS(1)PRR;DCDPGS(1)PRR 69.979 0.0023581999999999995 172826000.0 5478.97 5611.02 6751.6 4957.360000000001 5395.219999999999 5589.93 6300.64 5755.92 4302.379999999999 5554.97 6438.91 True False 6035.191000995464 6083.880347276402 7209.80417666898 5263.564868218571 5016.278359698568 5544.407463415384 6540.414303042501 5641.1136601681155 4121.565930529471 5204.22824618289 5646.964889613469 1.068749517479038 1.0773717326393435 1.2767573940348134 0.932105116838943 0.8883140691958383 0.9818384870097705 1.1582176321075353 0.9989638275498905 0.7298727743305643 0.92159741523364 1.0 12.46325994595508 -7.0031586867749835 0.5875242046759448 0.8873239452353676 1.1323325481268374 0.19221471831467996 0.12381753871930981 1.070566623473268 0.6454058413808664 0.0314667635035808 0.12351676219620679 9.927532402313524e-08 7.0031586867749835 0.24500860289146975 DCEYQQISPGAAPLPAS(ph)PGAR ddPTM_A549_MK2206_60min_R1 2 DCEYQQISPGAAPLPASPGAR 21 0 Q9NUE0 Q9NUE0 ZDHHC18 Palmitoyltransferase ZDHHC18 1 DCEYQQISPGAAPLPAS(1)PGAR;DCEYQQISPGAAPLPAS(1)PGAR 132.13 1.5209e-17 6805500.0 918.6700000000001 1058.35 1064.89 904.4300000000001 1409.18 1569.03 1082.77 1158.54 1714.17 1660.77 1647.2199999999998 True False 1073.7190366749082 1112.2154944216556 1215.9074146309229 1126.015390601405 1201.891488729458 1735.0637131621781 1279.4952933981042 1322.766592879947 1325.913231967001 1285.6009035451425 1238.1698130407556 0.8671823730204007 0.898273793067386 0.9820199150590179 0.9094191917311274 0.9707000413600751 1.4013132083240887 1.0333762622235634 1.068324052927308 1.0708654160375313 1.0383074195516877 1.0 10.273993476137624 -7.011065000322421 24.965016007999704 1.0651666279386909 0.920693638391236 0.3854656129177385 0.10714044868647445 545.8956538004181 1231661.487638052 0.01606900333381665 0.028986338810784374 9.748437231338884e-08 7.011065000322421 -0.1444729895474549 DCEYQQISPGAAPLPAS(ph)PGAR ddPTM_A549_PD325901_60min_R1 2 DCEYQQISPGAAPLPASPGAR 21 0 Q9NUE0 Q9NUE0 ZDHHC18 Palmitoyltransferase ZDHHC18 1 DCEYQQISPGAAPLPAS(1)PGAR;DCEYQQISPGAAPLPAS(1)PGAR 150.94 4.1376e-22 7071600.0 2545.1 2680.7 2517.0 2266.15 2663.8999999999996 2429.6 2396.0099999999998 2019.35 2205.0 2957.3999999999996 3369.5 True False 2803.476678396408 2906.6119969174692 2687.818755950565 2406.124938699935 2476.796853956097 2409.814143131313 2487.191471696981 1979.0724801005697 2112.3315180940517 2770.669259286958 2955.0728610203546 0.9486996802604717 0.9836007887513973 0.9095609084313713 0.8142354019214016 0.8381508580133236 0.8154838328755218 0.8416684084189318 0.6697203666975634 0.7148153759446346 0.9375976125103989 1.0 11.528977986955535 -6.030728819920908 3.7069770778975792 0.8388976242951658 0.9647332629763413 0.2798608779585222 0.08615501370208077 0.31713385463498234 9.223052386750584 0.016327532455182106 0.05080779752724431 9.316894549398578e-07 6.030728819920908 0.12583563868117553 DCIHEHLS(ph)GDEFEK ddPTM_A549_MK2206_60min_R1 4 DCIHEHLSGDEFEK 14 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 DCIHEHLS(1)GDEFEK;DCIHEHLS(1)GDEFEK;DCIHEHLS(1)GDEFEK;DCIHEHLS(1)GDEFEK 111.33 2.874e-06 27513000.0 5485.36 6103.97 4715.73 4935.84 6942.53 6194.9 5793.08 5244.63 8510.9 7313.23 8107.13 True False 6411.154663823868 6414.636000836163 5384.4914239005775 6145.121021578276 5921.293033713881 6850.440206158186 6845.6076491578915 5988.072363505757 6583.1947391145295 5661.166263741179 6093.905875594702 1.0520600079334514 1.052631289650525 0.8835862472810359 1.0084043217977299 0.9716745146044818 1.124146047872729 1.1233530331627959 0.9826328935415963 1.080291503267119 0.9289881365600693 1.0 12.573151501479815 DCIHEHLS(ph)GDEFEK ddPTM_A549_PD325901_60min_R1 2 DCIHEHLSGDEFEK 14 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 DCIHEHLS(1)GDEFEK;DCIHEHLS(1)GDEFEK 148.46 8.672899999999999e-14 25474000.0 8072.1 8838.6 8864.6 8694.0 8271.9 7491.1 8026.799999999999 9042.8 7272.9 8322.0 9693.6 True False 8891.57364963405 9583.459841069394 9466.205063170197 9231.008634493408 7690.910280505812 7430.094965266293 8332.264266433496 8862.43426006064 6967.245305191035 7796.547499758595 8501.348652793266 1.0459015401882819 1.127287002624058 1.1134945112573298 1.085828732769406 0.9046694347700738 0.8739901477661437 0.9801108749605024 1.0424739205524447 0.8195458849816524 0.917095371355803 1.0 13.053476013013155 -6.743181666672065 9.033294850667478 0.9240660400710963 1.0973215740647884 0.6101165174479328 0.06083908774784962 0.13341744090683297 56.782229346156825 0.011067908155944065 0.022648546317441568 1.8064183377901688e-07 6.743181666672065 0.1732555339936921 DCLIEDS(ph)DDEAGQS ddPTM_A549_MK2206_60min_R1 2 DCLIEDSDDEAGQS 14 0 H3BPG4;H3BSW6;Q2VPK5-3;Q2VPK5 H3BPG4 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 DCLIEDS(0.998)DDEAGQS(0.002);DCLIEDS(1)DDEAGQS 131.13 9.03e-09 7070500.0 664.1 819.54 796.04 556.4200000000001 1060.72 1088.64 640.8 769.9499999999999 1211.41 1079.1 962.72 True False 776.183844313852 861.2510854616373 908.9304419637715 692.7429249786428 904.6894931272878 1203.8391622192535 757.225065350448 879.0927703729831 937.0275692242569 835.3305605325015 723.650054279693 1.0725955725747165 1.1901485813041357 1.2560358927472244 0.9572899509669566 1.2501753959347077 1.6635653588356754 1.0463967505732794 1.2148037095748092 1.2948628465964198 1.154329438092799 1.0 9.499148391215874 -10.887592057857185 1.0878022253351107 0.9975238196911757 1.2238304016329113 0.05952000655784151 0.17780753241596117 0.7202782666448707 1.48597384004301 0.1259060730377992 0.0288807274356919 1.2954120785543948e-11 10.887592057857185 0.2263065819417357 DCLIEDS(ph)DDEAGQS ddPTM_A549_PD325901_60min_R1 2 DCLIEDSDDEAGQS 14 0 H3BPG4;H3BSW6;Q2VPK5-3;Q2VPK5 H3BPG4 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 DCLIEDS(1)DDEAGQS;DCLIEDS(1)DDEAGQS 90.73100000000001 6.777600000000001e-05 20648000.0 776.86 867.3 767.87 405.67 980.36 676.24 784.4300000000001 991.59 767.88 490.62 890.2900000000001 True False 855.7262553058949 940.3904147896142 819.9822757774173 430.72731455658374 911.5028956583953 670.7329256466575 814.2819129065663 971.8119595626936 735.6086739746305 459.6421694702672 780.7899740132998 1.0959749532994372 1.2044089269691312 1.0501957031577482 0.5516557959147754 1.1674111169399686 0.8590439784966198 1.0428949397507197 1.244652200856949 0.9421338624439103 0.5886886163607907 1.0 9.608790717401241 -5.996354648975544 24.806420214623046 0.9736420283474851 1.1444696259938862 0.12812174843712065 0.2051197260354556 138.25249484073382 940760.5396977479 0.021663778998644273 0.06690528255115107 1.0084290570572541e-06 5.996354648975544 0.1708275976464011 DCLIEDSDDEAGQS(ph) ddPTM_A549_MK2206_60min_R1 1 DCLIEDSDDEAGQS 14 0 H3BPG4;H3BSW6;Q2VPK5-3;Q2VPK5 H3BPG4 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 DCLIEDS(0.095)DDEAGQS(0.905) 44.309 0.059338999999999996 440260.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DCNS(ph)ESEVTKER ddPTM_A549_MK2206_60min_R1 1 DCNSESEVTKER 12 1 Q92628 Q92628 KIAA0232 Uncharacterized protein KIAA0232 1 DCNS(0.999)ES(0.001)EVTKER 67.93 0.0012488 2742900.0 452.7 519.92 540.22 418.5 625.0 560.32 489.33 371.68 754.67 773.49 748.59 True False 529.1046925476297 546.3817072421288 616.8313192272606 521.0325187871787 533.0633279324934 619.6126904896859 578.2349270098855 424.36677822226136 583.7384499603523 598.7580717878643 562.6944429670474 0.9403055231142833 0.971009602229404 1.0962100780216584 0.9259599509101452 0.9473406652493114 1.1011530293821858 1.0276179803036516 0.7541691294916755 1.0373986401613307 1.064090963171159 1.0 9.136207905536518 DCNS(ph)ESEVTKER ddPTM_A549_PD325901_60min_R1 1 DCNSESEVTKER 12 1 Q92628 Q92628 KIAA0232 Uncharacterized protein KIAA0232 1 DCNS(0.999)ES(0.001)EVTKER 53.403 0.0063544 2835600.0 678.14 857.99 757.39 662.33 725.63 834.0 983.28 906.46 763.7 830.94 834.44 True False 746.9842735797178 930.2958284161671 808.7910399560584 703.2406198394315 674.6642520876017 827.2081805118182 1020.6992584714619 888.379944195887 731.6043448382887 778.4743065908926 731.8091699509797 1.0207364218048192 1.2712273453453486 1.105193912793188 0.9609617489304461 0.9219128152395167 1.1303605017237333 1.3947615039311867 1.2139502764845038 0.9997201113061965 1.063766810469236 1.0 9.515323683287086 -8.790901101713551 23.8429091933011 0.9998677565281585 1.1280577002657135 0.11137289782040727 0.12987820224637447 171.2342949112881 138576.22512083358 0.023796196722602775 0.02533549688766571 1.618448551570217e-09 8.790901101713551 0.128189943737555 DCRS(ph)PGLLDTTPIR ddPTM_A549_MK2206_60min_R1 1 DCRSPGLLDTTPIR 14 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 DCRS(0.998)PGLLDT(0.001)T(0.001)PIR 41.912 0.024562999999999998 4322400.0 172.53 293.31 201.74 156.27 165.61 312.96 157.16 257.74 315.75 312.38 303.88 True False 201.6488460464824 308.2382261716971 230.34976554164513 194.5561570152269 141.2489883822404 346.07721947396533 185.71393768800945 294.275434295646 244.23312914913976 241.81314104266772 228.4182093386584 0.882805476105948 1.349446819779134 1.0084562268856725 0.851754146827993 0.6183788446253916 1.5151034607790959 0.8130434881952229 1.2883186290080144 1.0692366858853788 1.0586421360310625 1.0 7.83553385569185 DCRS(ph)PGLLDTTPIR ddPTM_A549_PD325901_60min_R1 2 DCRSPGLLDTTPIR 14 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 DCRS(1)PGLLDTTPIR;DCRS(1)PGLLDTTPIR 126.19 9.106799999999999e-08 23146000.0 1261.55 1217.83 1733.34 1097.74 1198.54 1188.52 1350.68 1551.58 1027.9299999999998 1272.84 1375.53 True False 1389.6216272959755 1320.460808074756 1850.974875820164 1165.5449066515744 1114.3586851385332 1178.8410871725498 1402.0808665204565 1520.6325197090368 984.7296768228649 1192.4726651757665 1206.3485302030952 1.1519238366892406 1.0945931254647026 1.5343616123182433 0.9661759246768832 0.923745217272263 0.977197764707423 1.1622518960456716 1.2605250320593753 0.8162895317301713 0.9884976317540731 1.0 10.23643106599005 -6.951390936172097 0.47600065744103304 0.9300963015438539 1.2494403333583468 0.1183824571412595 0.1753040376221735 1.5576042099790788 0.5703489723758036 0.04710133936624159 0.21557246848317338 1.1184306594069943e-07 6.951390936172097 0.3193440318144929 DCSPS(ph)SPLKLDAR ddPTM_A549_PD325901_60min_R1 1 DCSPSSPLKLDAR 13 1 Q9Y485;F5H269 Q9Y485 DMXL1 DmX-like protein 1 1 DCS(0.119)PS(0.474)S(0.407)PLKLDAR 47.548 0.025994999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DCSYGAVT(ph)SPTSTLESR ddPTM_A549_PD325901_60min_R1 1 DCSYGAVTSPTSTLESR 17 0 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4;J3KRP9 Q9HCD6 TANC2 Protein TANC2 1 DCSYGAVT(0.447)S(0.447)PT(0.093)S(0.01)T(0.002)LESR 168.05 1.0805999999999998e-29 16700000.0 3963.6 3724.0 4547.1 4562.3 4740.5 4913.9 4114.2 4400.9 4353.6 4423.6 5891.3 True False 4365.9817541519005 4037.8345493791385 4855.693549933574 4844.102909264925 4407.543633837184 4873.88282759835 4270.768132376627 4313.120597060736 4170.6333320518215 4144.293141063699 5166.707448027666 0.8450220567101329 0.781510195805752 0.9398042367943983 0.9375609046945571 0.8530662279939452 0.943324714361155 0.8265937592435094 0.8347909457709325 0.8072129831240813 0.8021149218823562 1.0 12.33502948171524 -10.92699585051031 1.1872483218381376 0.9998874309574286 0.8604435991984803 0.0 0.07792184428364912 0.3439227579446322 0.8624775995853647 0.038948140039539635 0.009211907782918428 1.1830528592125303e-11 10.92699585051031 -0.13944383175894826 DCSYGAVTS(ph)PTSTLESR ddPTM_A549_PD325901_60min_R1 1 DCSYGAVTSPTSTLESR 17 0 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4;J3KRP9 Q9HCD6 TANC2 Protein TANC2 1 DCSYGAVT(0.023)S(0.951)PT(0.023)S(0.002)TLESR 227.63 1.0536999999999999e-63 16417000.0 5525.1 5192.8 5333.8 6161.0 6055.6 4716.2 6137.8 5465.0 5857.8 6396.7 7239.8 True False 6086.004084636358 5630.415480133187 5695.783742744983 6541.550977353791 5630.275546685888 4677.792830851126 6371.377337733034 5355.996287790438 5611.617037048222 5992.8112703323495 6349.350496873471 0.9585238817156513 0.8867703055463233 0.8970655731715685 1.0302708884278735 0.8867482665287312 0.7367356445599518 1.0034691486744054 0.8435502639880761 0.8838096179776938 0.9438463466906281 1.0 12.632393304442202 -10.744512764630604 0.9919030902299415 1.0001216941768978 0.9014226848808259 0.09296161517646817 0.07642607557842697 0.7197354079943453 1.2557398233778008 0.049809287266354786 0.012718284530190846 1.8008902025328623e-11 10.744512764630604 -0.0986990092960719 DDAMLLK ddPTM_A549_PD325901_60min_R1 3 DDAMLLK 7 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;; 91.041 0.029997000000000003 9057900.0 8230.5 8399.3 7128.2 7438.699999999999 8988.3 6937.900000000001 7638.9 7518.000000000001 8538.0 8658.4 8975.5 False True 9066.054301026143 9107.138488345916 7611.962517348751 7898.171604486551 8356.992815951646 6881.4000426534185 7929.60251966647 7368.0475922430915 8179.177551694789 8111.707146348214 7871.570400382309 1.1517465816714056 1.1569658943663386 0.967019556476183 1.0033794024255884 1.06166779827641 0.8742092991151041 1.0073723687056577 0.9360327377476338 1.039078244323082 1.0305068409162983 1.0 12.942435770818111 -5.75386423798184 24.980383303524313 1.0022518907473632 1.154356325556431 0.6050619897916587 0.05022871564666964 85.55620167644365 282129.33936051955 0.006725202005167589 0.0250645724701227 1.7625269325654717e-06 5.75386423798184 0.15210443480906788 DDAT(ph)PVRDEPMDAESITFK ddPTM_A549_MK2206_60min_R1 4 DDATPVRDEPMDAESITFK 19 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK 89.946 2.1451e-06 18813700.0 4229.63 5119.27 4562.59 4633.82 6717.51 5789.42 5375.77 5472.12 6480.46 6275.970000000001 6793.1 True False 4943.488139474777 5379.818976829923 5209.633869151654 5769.106108020084 5729.373177631688 6402.052581694029 6352.477823906025 6247.809767664662 5012.646157168117 4858.2240181495345 5106.185789977756 0.968137146356422 1.0535885684749748 1.0202593645097955 1.1298269090293356 1.122045576343325 1.25378371352248 1.244074948540738 1.2235766626290108 0.9816811145036602 0.9514389444436369 1.0 12.318030316218943 -8.78651331835972 24.949011066455764 0.9913493848475988 1.1289819300005746 0.36643509912419225 0.08684146969486142 194.89350797509718 193921.51899748197 0.016328943817606165 0.017386906127463977 1.6348830139651666e-09 8.78651331835972 0.13763254515297574 DDAT(ph)PVRDEPMDAESITFK ddPTM_A549_PD325901_60min_R1 3 DDATPVRDEPMDAESITFK 19 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK 108.64 3.8438e-10 19594800.0 6644.0 6505.1 6229.5 8459.8 9225.9 7201.6 7169.5 6583.9 8585.1 7982.799999999999 8485.6 True False 7318.493988945713 7053.307606650439 6652.271331026633 8982.342632400196 8577.904611627144 7142.952557282871 7442.3392458009375 6452.578949530367 8224.298102489456 7478.764645646827 7441.924994650337 0.9834141024273487 0.9477799912953628 0.8938912090364589 1.2069918252142013 1.152645937414501 0.9598259270844057 1.0000556645156862 0.8670577779497689 1.10513047476312 1.0049502851779577 1.0 12.861460134627075 DDDDIDLFGS(ph)DDEEESEEAK ddPTM_A549_PD325901_60min_R1 2 DDDDIDLFGSDDEEESEEAK 20 0 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 DDDDIDLFGS(0.964)DDEEES(0.036)EEAK;DDDDIDLFGS(0.95)DDEEES(0.05)EEAK 61.648 0.00069652 2600400.0 183.06 354.15999999999997 199.76 0.0 300.37 355.48 108.02 452.07 314.37 194.36 278.05 True False 201.64411643835064 384.0063061246282 213.31691485446345 0.0 279.2730474202459 352.58508873901826 112.13076021081204 443.0531092079458 301.1581221511234 182.08807643031494 243.85161270417277 0.8269131961123181 1.5747540148134405 0.874781644824501 0.0 1.1452581523791048 1.445900171949057 0.4598319402826458 1.8168963669944362 1.235005661071726 0.7467167201031149 1.0 7.9298597033936105 -6.920170305854835 23.270575035313293 1.1454723499670934 0.8390145730819496 0.08488412818152036 0.47155968295785394 34.60885918233727 10084.791355673127 0.06425790115810265 0.12143619051378966 1.201793066594526e-07 6.920170305854835 -0.30645777688514375 DDDDIDLFGS(ph)DDEEESEEAKR ddPTM_A549_MK2206_60min_R1 1 DDDDIDLFGSDDEEESEEAKR 21 1 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 DDDDIDLFGS(0.884)DDEEES(0.116)EEAKR 41.76 0.031654 1268700.0 576.26 392.39 228.63 366.88 830.05 471.72 110.88 536.84 419.47 557.28 348.43 True False 673.5185997956643 412.36097496680026 261.0531718835448 456.7656164698693 707.9507445605865 521.6370972976065 131.0254607460326 612.9387140035481 324.4607147559451 431.3900609522312 261.9052148212082 2.5716120248138146 1.5744664543938234 0.9967467507730038 1.7440111560271307 2.703079986566419 1.9917018363063388 0.5002781667996884 2.3403074063339133 1.2388478594343415 1.6471228388740686 1.0 8.032900975396018 -8.884887956774111 0.6335530340454609 1.0210748203418454 1.8359109716656565 0.06085455454484623 0.6470647027058046 0.7536084531380178 0.6634359318393015 0.19653303839177813 0.1801644032054273 1.3035030245987622e-09 8.884887956774111 0.8148361513238112 DDDDIDLFGS(ph)DDEEESEEAKR ddPTM_A549_PD325901_60min_R1 2 DDDDIDLFGSDDEEESEEAKR 21 1 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR 187.81 6.0388e-45 337920000.0 5187.3 6202.3 5434.9 5750.200000000001 5341.3 4281.2 4113.700000000001 4615.6 5115.799999999999 6262.6 5520.299999999999 True False 5713.9108773115695 6724.989587973744 5803.744996708672 6105.376794348286 4966.145514484666 4246.335326627338 4270.249104603014 4523.538237131847 4900.800716673718 5867.178367217997 4841.338096064893 1.1802338039468707 1.389076626034424 1.198789442411807 1.261092836980508 1.0257795295315604 0.8770995213242427 0.8820390189385723 0.9343570201818052 1.0122822697834628 1.2118918883163565 1.0 12.241190133350427 -6.799087752369889 4.369505655735992 0.9806654750462442 1.2646664543164459 0.6320207702900438 0.09757207579387572 0.07156949892143709 3.000896924416234 0.010408847730978369 0.020773950426073818 1.5882258035585046e-07 6.799087752369889 0.2840009792702016 DDEKEAEEGEDDRDS(ph)ANGEDDS ddPTM_A549_MK2206_60min_R1 2 DDEKEAEEGEDDRDSANGEDDS 22 2 G3V4C1;G3V2Q1;P07910-2;P07910;G3V2D6;P07910-4;P07910-3 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 DDEKEAEEGEDDRDS(1)ANGEDDS;DDEKEAEEGEDDRDS(0.926)ANGEDDS(0.074) 276.39 2.5177999999999996e-139 275810000.0 13832.4 14727.7 13067.7 12333.2 20673.4 16548.7 14215.7 16334.2 17896.7 18728.1 17464.0 True False 16166.970950289002 15477.277022907181 14920.896357532247 15354.834553658391 17632.370245887374 18299.872449861985 16798.508678998693 18649.62287138954 13843.12602515726 14497.409202769664 13127.206818120087 1.231562142220003 1.1790228673432024 1.1366390858515498 1.1696954855973936 1.3431928429396423 1.394041604083043 1.2796712135144348 1.420684775503545 1.054537055518083 1.1043788220627577 1.0 13.680272354551537 -8.889779878009044 7.597320014930786 1.0239580411605158 1.265270897294768 0.5313704558015604 0.08966309690441374 0.11910483187708991 7.604067942822204 0.016452829641637 0.0174689634348649 1.288902665983835e-09 8.889779878009044 0.24131285613425213 DDEKEAEEGEDDRDS(ph)ANGEDDS ddPTM_A549_PD325901_60min_R1 1 DDEKEAEEGEDDRDSANGEDDS 22 2 G3V4C1;G3V2Q1;P07910-2;P07910;G3V2D6;P07910-4;P07910-3 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 DDEKEAEEGEDDRDS(1)ANGEDDS 312.65 5.129599999999998e-176 198180000.0 12254.0 12466.0 12957.0 12962.0 16466.0 11636.0 12898.0 12088.0 13647.0 14849.0 14950.0 True False 13498.017059081994 13516.553569430807 13836.339936770537 13762.633301162132 15309.484964616195 11541.24027390351 13388.840448056415 11846.895357147443 13073.464048720876 13911.4316058538 13111.244775858233 1.0294992801855036 1.0309130674090434 1.055303304400771 1.0496816691656388 1.1676606780162924 0.8802551146901341 1.0211723354222872 0.9035675528658546 0.9971184484933938 1.0610305767053447 1.0 13.678517040449105 -7.261302243094891 24.999999994671043 0.9851636884762653 1.063059553377131 0.35734645037700385 0.05909883745152423 11.16388608380539 2035126.8253924071 0.0077372564774385345 0.012876927597808972 5.4789552954958364e-08 7.261302243094891 0.07789586490086564 DDEKEAEEGEDDRDSANGEDDS(ph) ddPTM_A549_PD325901_60min_R1 1 DDEKEAEEGEDDRDSANGEDDS 22 2 G3V4C1;G3V2Q1;P07910-2;P07910;G3V2D6;P07910-4;P07910-3 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 DDEKEAEEGEDDRDS(0.366)ANGEDDS(0.634) 111.83 4.0874000000000005e-11 179200000.0 3464.7 4158.1 4348.7 3563.1 4536.6 3417.5 3798.9 3511.0 4482.6 3706.6 3924.9 True False 3816.433793422669 4508.517679853222 4643.828932857456 3783.1845946127723 4217.964866420374 3389.6690130685147 3943.469218337843 3440.9703506737833 4294.211910661403 3472.5646434276855 3442.1621819910356 1.1087315447801316 1.3097923460554026 1.3491023046948196 1.0990721513372972 1.225382374046244 0.9847499431615516 1.1456372506122992 0.9996537550370265 1.2475332897235887 1.0088323733250315 1.0 11.749099358112831 -6.281848791276411 23.808154767555777 1.1102590804718468 1.2612670936214472 0.3275573708017786 0.1032392174841661 429.273142127464 500759.0072363423 0.0158113757973718 0.036792946859057214 5.225781038449128e-07 6.281848791276411 0.15100801314960033 DDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ ddPTM_A549_MK2206_60min_R1 1 DDGDEEGLLTHSEEELEHSQDTDADDGALQ 30 0 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 DDGDEEGLLT(0.093)HS(0.734)EEELEHS(0.087)QDT(0.087)DADDGALQ 55.67 0.0014065999999999998 9339300.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ ddPTM_A549_PD325901_60min_R1 1 DDGDEEGLLTHSEEELEHSQDTDADDGALQ 30 0 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 DDGDEEGLLT(0.062)HS(0.938)EEELEHSQDTDADDGALQ 136.73 2.5425e-28 12018000.0 0.0 0.0 0.0 181.98 0.0 0.0 0.0 0.0 225.36 0.0 180.46 True False 0.0 0.0 0.0 193.22049129343344 0.0 0.0 0.0 0.0 215.8889029105104 0.0 158.26456403019236 0.0 0.0 0.0 1.2208702085488479 0.0 0.0 0.0 0.0 1.3641013339494301 0.0 1.0 7.306194457120805 -8.760427499769225 24.99969769306843 1.1719367757331831 0.16278264153165303 0.13759905710368026 0.4995418512579311 12.879032326855345 318191.3758099735 0.06288351448218327 0.0693369356543094 1.7360910581652025e-09 8.760427499769225 -1.00915413420153 DDGKLDLS(ph)VVENGGLK ddPTM_A549_PD325901_60min_R1 2 DDGKLDLSVVENGGLK 16 1 H0YJJ9;H0YJ50;Q99986 H0YJJ9 VRK1 Serine/threonine-protein kinase VRK1 1 DDGKLDLS(1)VVENGGLK;DDGKLDLS(1)VVENGGLK 108.18 1.8358e-07 3380900.0 2059.2200000000003 2028.5 1818.02 2173.0299999999997 1937.49 1743.89 1934.12 2642.56 1952.22 2063.2599999999998 2479.13 True False 2268.270498482357 2199.4488140213703 1941.40176984237 2307.2531277907988 1801.4073863776407 1729.6883380248867 2007.7239949910747 2589.8520677517854 1870.1749824279236 1932.9854114818443 2174.2127264998944 1.043260611455384 1.0116070001862705 0.8929217211269342 1.0611901492753546 0.8285331809632052 0.7955469660088804 0.9234257395885831 1.191167743701417 0.8601619149928265 0.8890507299134505 1.0 11.08627738622894 -5.602643788030391 6.029380417674009 0.9394386806919616 1.0357848819280964 0.09649647061185795 0.10711069697788837 0.34219499498842576 19.5326608287653 0.014778276104814988 0.05952736079692781 2.496641653759166e-06 5.602643788030391 0.0963462012361348 DDGSSMSFYVRPS(ph)PAK ddPTM_A549_MK2206_60min_R1 5 DDGSSMSFYVRPSPAK 16 1 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 DDGS(0.001)S(0.001)MS(0.001)FY(0.021)VRPS(0.976)PAK;DDGSSMS(0.001)FY(0.001)VRPS(0.998)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMS(0.001)FY(0.002)VRPS(0.996)PAK;DDGSSMSFYVRPS(1)PAK 104.89 2.5978999999999997e-07 76158000.0 18453.0 20743.2 19207.3 17706.2 26328.0 19722.399999999998 19609.8 19843.300000000003 29020.7 29117.0 30807.300000000003 True False 21567.415267465014 21798.94027862926 21931.183958005542 22044.219794861525 22455.18607649071 21809.41127733043 23172.646826637352 22656.148542557592 22447.557786535028 22539.449477365255 23156.99717177456 0.9313563026968348 0.9413543611431364 0.9470651050014753 0.9519463871477529 0.9696933462452866 0.9418065354308257 1.0006758067441432 0.9783716072726631 0.9693639300477072 0.9733321341351625 1.0 14.499160566975954 -2.00000000039654 0.11160584936048595 1.01259376193408 0.7653050677954099 0.5954569945530929 0.014220814076204716 37.20206015200542 0.27938480494951196 0.05818507707574127 1.4267173643769264 0.009999999990869327 2.00000000039654 -0.24728869413867005 DDGSSMSFYVRPS(ph)PAK ddPTM_A549_PD325901_60min_R1 4 DDGSSMSFYVRPSPAK 16 1 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 DDGSSMSFY(0.002)VRPS(0.997)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMS(0.001)FY(0.004)VRPS(0.994)PAK;DDGSSMSFYVRPS(0.999)PAK 105.56 2.4427e-07 173438000.0 35471.6 36021.7 34845.9 34374.4 41882.1 38519.8 38223.8 37144.9 40158.6 40177.3 43216.9 True False 39072.650719188234 39057.37507716712 37210.75231941906 36497.62861807342 38940.44578140118 38206.10751999897 39678.42762586594 36404.015829889664 38470.87369729334 37640.49842129907 37901.49527450082 1.0308999799666305 1.0304969446269827 0.9817753112356368 0.9629601247586691 1.0274118606502403 1.0080369453313651 1.046882908932635 0.9604902277927113 1.0150225846940553 0.9931138111752191 1.0 15.209967145691293 -5.694973793940803 15.933447670330217 1.0039812724609531 1.0307147728993171 0.1733917052097853 0.024733569079997676 3.3738258136268233 805.9702062635922 0.003186988796643825 0.012343808253048497 2.01848815897596e-06 5.694973793940803 0.026733500438363977 DDGSSMSFYVRPS(ph)PAKR ddPTM_A549_MK2206_60min_R1 2 DDGSSMSFYVRPSPAKR 17 2 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 DDGSSMSFYVRPS(1)PAKR;DDGSSMSFYVRPS(0.999)PAKR 83.42299999999999 3.028e-05 15976100.0 1854.88 1900.75 1713.62 1780.68 2143.02 1906.13 1953.17 2070.77 3100.4 2366.0 2452.79 True False 2167.9383965379902 1997.4900562403373 1956.6370835108248 2216.9466799377615 1827.784596841429 2107.8354114133094 2308.035706758014 2364.3079889671544 2398.164350321433 1831.5189567416357 1843.6945494398053 1.1758663587722296 1.0834170209199032 1.061258809983105 1.2024479220874014 0.9913706136392222 1.1432671491347424 1.251853625894428 1.2823751036664583 1.3007384282011898 0.9933960900942789 1.0 10.848383944491074 -7.512989557190575 24.626999378308824 1.1672494293648463 1.10124218613627 0.0727773969883515 0.1071226978864746 1015.0333949898163 2527731.389570078 0.01955120180606022 0.029999569078864533 3.0690957853156045e-08 7.512989557190575 -0.06600724322857632 DDGSSMSFYVRPS(ph)PAKR ddPTM_A549_PD325901_60min_R1 3 DDGSSMSFYVRPSPAKR 17 2 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 DDGSSMSFYVRPS(1)PAKR;DDGSSMSFYVRPS(1)PAKR;DDGSSMS(0.002)FYVRPS(0.998)PAKR 128.14 1.1799e-12 19150500.0 2755.4300000000003 2916.5299999999997 3025.45 3704.2 3278.8 3728.0 3139.34 3637.1 3707.5 3401.4500000000003 4050.3999999999996 True False 3035.1592251596444 3162.3162186629233 3230.7752305087943 3933.0000211514243 3048.5083992459386 3697.6404040144594 3258.809301612765 3564.555187250247 3551.6866681785455 3186.681866504912 3552.2264776010816 0.8544385455989768 0.8902349663241417 0.9095071079732021 1.1071929241987661 0.85819651941356 1.040935995306127 0.9173990797494226 1.0034706992155216 0.9998480363158317 0.8970942271273671 1.0 11.794507850498723 -6.0187809796932905 23.550901061431002 0.9933716019307544 0.8792202572024603 0.266072077592725 0.06705117011797912 222.77217557902168 279353.2903448522 0.0073012794646731514 0.01972756584090375 9.576769183491452e-07 6.0187809796932905 -0.11415134472829402 DDGVFVQEVTQNS(ph)PAAR ddPTM_A549_MK2206_60min_R1 4 DDGVFVQEVTQNSPAAR 17 0 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2;E9PQE3 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVT(0.027)QNS(0.973)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVT(0.001)QNS(0.999)PAAR 353.96 4.920799999999997e-220 108146000.0 8426.43 9250.39 10238.380000000001 8365.77 13392.330000000002 10165.66 9215.349999999999 10964.16 13462.97 13705.14 14318.94 True False 9848.605377565991 9721.195339389738 11690.336237366257 10415.384025553692 11422.335997712282 11241.383393781027 10889.659809577479 12518.363256331773 10413.62879094534 10609.13935536688 10763.152015360301 0.9150298503180906 0.9031922363928739 1.0861443024016342 0.9676890199720024 1.0612445110327575 1.0444322794789327 1.0117537868123236 1.1630759500996155 0.9675259418508491 0.9856907474898035 1.0 13.393813016087663 -5.732772888949309 24.986213092726974 1.0111113703150596 0.9091108742195523 0.3598526919537868 0.05797502380678789 196.4414235289821 171218.9216031606 0.008156469356017932 0.03157856607417855 1.8502359330722205e-06 5.732772888949309 -0.10200049609550732 DDGVFVQEVTQNS(ph)PAAR ddPTM_A549_PD325901_60min_R1 2 DDGVFVQEVTQNSPAAR 17 0 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2;E9PQE3 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR 304.2 1.3490999999999997e-151 183686000.0 10948.599999999999 11198.0 11601.1 10887.7 12870.5 12221.4 10895.4 13223.900000000001 11865.8 11611.3 13412.0 True False 12060.093812066667 12141.69475938441 12388.420409081486 11560.208501239225 11966.520480814572 12121.872970392256 11310.030409191655 12960.138940551144 11367.12169043102 10878.16053640315 11762.409025672941 1.0253081478244797 1.032245582761459 1.0532213581454442 0.9828095992927649 1.017352861535093 1.0305604016944776 0.961540309005246 1.1018269227216981 0.9663940155133904 0.9248242016291214 1.0 13.521895944270058 DDGYS(ph)TKDSYSSR ddPTM_A549_MK2206_60min_R1 2 DDGYSTKDSYSSR 13 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DDGYS(0.911)T(0.061)KDS(0.028)YSSR;DDGYS(0.965)T(0.034)KDS(0.001)YSSR 118.23 3.9089e-06 82456000.0 28249.0 30374.0 29793.0 29490.0 28514.0 20109.9 16368.8 16036.6 29788.0 46985.0 46827.0 True False 33016.74057825933 31919.90686215652 34018.0953939835 36715.05132385639 24319.628372267405 22237.916270128746 19342.799078820884 18309.837160027768 23041.065561661362 36371.05586750033 35198.56354054678 0.9380138635551388 0.9068525431552504 0.9664626044979523 1.0430837974840281 0.6909267289914418 0.6317847671400542 0.5495337631190279 0.5201870564671157 0.6546024395319242 1.0333108004706757 1.0 15.10322893297975 -6.76347648564031 24.985853168417805 0.7627239680885355 0.9597538312988719 0.325812917628016 0.15898589965705487 69.59074908959775 853573.6698327828 0.027632715220583342 0.054127406970582 1.7239454294809293e-07 6.76347648564031 0.19702986321033644 DDGYS(ph)TKDSYSSR ddPTM_A549_PD325901_60min_R1 2 DDGYSTKDSYSSR 13 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DDGY(0.001)S(0.861)T(0.065)KDS(0.065)YS(0.004)S(0.005)R;DDGYS(0.946)T(0.053)KDSYSSR 67.32600000000001 0.0036867 18601800.0 6727.0 7259.6 7960.5 8083.1 9372.1 8252.2 7813.1 9263.8 9479.0 8734.1 8913.8 True False 7409.9200878443435 7871.391969568412 8500.74740037524 8582.374728947974 8713.836027989768 8184.996819208188 8110.431795992375 9079.026241689493 9080.630594110437 8182.627435429174 7817.45910923378 0.9478680968208633 1.0068990268552769 1.0874054192793126 1.0978470893196866 1.1146634611362676 1.0470149833646436 1.0374767149613284 1.1613781555909366 1.1615833824298014 1.0467118946313472 1.0 12.932484052530352 -5.560424247672241 2.719507159135003 1.083530946733863 0.950342910310941 0.442471813249545 0.04796794880418569 0.27368166975299674 3.693080271650033 0.008905721357598866 0.06006602929942223 2.751539503662253e-06 5.560424247672241 -0.13318803642292198 DDKEEEEDGTGS(ph)PQLNNR ddPTM_A549_MK2206_60min_R1 2 DDKEEEEDGTGSPQLNNR 18 1 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 DDKEEEEDGT(0.088)GS(0.912)PQLNNR;DDKEEEEDGT(0.047)GS(0.953)PQLNNR 126.51 8.4534e-12 35092000.0 2232.4 2780.8 2102.59 1840.71 3298.6000000000004 3139.1 2754.5 2318.1000000000004 3419.0 3117.5 3841.3999999999996 True False 2609.1745430601472 2922.330842242869 2400.768878408881 2291.6840326326123 2813.3803096289985 3471.27747843406 3254.9569951744847 2646.697773883515 2644.601959021088 2413.254584802218 2887.474362753462 0.9036182543183062 1.0120716152285307 0.8314424915342055 0.7936638545414786 0.9743394940297206 1.2021846923426498 1.1272678424997669 0.916613427992363 0.9158875982189592 0.8357665840887211 1.0 11.495592421877314 -6.9691718639274045 24.81639061972101 0.9888916102482139 0.8896190556696458 0.19693787213002156 0.1072587491778703 272.6141125121225 219450.86645161244 0.015669497170369605 0.02961237394563123 1.0735644851804082e-07 6.9691718639274045 -0.0992725545785681 DDKEEEEDGTGS(ph)PQLNNR ddPTM_A549_PD325901_60min_R1 2 DDKEEEEDGTGSPQLNNR 18 1 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 DDKEEEEDGT(0.268)GS(0.732)PQLNNR;DDKEEEEDGT(0.004)GS(0.996)PQLNNR 191.99 7.0371e-41 45092000.0 3988.6 4009.3 3880.0 3513.5 4457.1 3905.4 3696.6000000000004 3853.9 4812.8 4203.2 4715.5 True False 4393.519735747872 4347.177781639576 4143.320132335396 3730.5209152625457 4144.048672160259 3873.595717231243 3837.2761358571365 3777.030941173939 4610.534752962838 3937.8092346773988 4135.523394017355 1.0623854146499925 1.0511795890039966 1.0018853087203714 0.902067419243546 1.0020614750131114 0.9366639595933542 0.9278816174533853 0.9133138858887782 1.1148612433513632 0.9521912608145371 1.0 12.013854213857538 -8.761381818577565 24.999999999649848 1.054240029130826 0.9738018489303573 0.04075957646612649 0.06377877045527308 1.661084104684767 721247.272407689 0.011305221087020794 0.012422414999312788 1.7322803595674525e-09 8.761381818577565 -0.08043818020046878 DDKGNAIGGK ddPTM_A549_PD325901_60min_R1 1 DDKGNAIGGK 10 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 81.017 0.0011603 91733000.0 3697.0 3325.6 3421.9 4312.6 4568.3 3996.8 3856.9 4469.2 6231.5 6036.5 6546.0 False True 4072.3167184124472 3605.859983194215 3654.13071155631 4578.979507374771 4247.438367779434 3964.2513859348182 4003.6764400766624 4380.058299980423 5969.611725624982 5655.354359804466 5740.883498512905 0.7093536594963691 0.6281019261457339 0.6365101665105835 0.797608853856883 0.739857962433774 0.6905298438753724 0.6973972631762617 0.7629589245479402 1.0398419907269196 0.9851017463199534 1.0 12.487057063521037 -8.686942285508536 4.234414061063909 1.0192295273350143 0.7016767800121806 0.8951461705054509 0.046066953923029924 0.04433751327327347 1.5312089125862434 0.008356456135060147 0.00938721171818636 2.0561638266368594e-09 8.686942285508536 -0.3175527473228337 DDKGSTSS(ph)TSGSSGSSTK ddPTM_A549_MK2206_60min_R1 1 DDKGSTSSTSGSSGSSTK 18 1 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 DDKGS(0.029)T(0.029)S(0.116)S(0.617)T(0.144)S(0.036)GS(0.009)S(0.011)GS(0.006)S(0.001)T(0.001)K 46.663000000000004 0.0064902 2350700.0 792.57 557.72 479.27 302.11 761.52 320.06 609.04 522.6 675.04 1019.0 893.96 True False 926.3364395239123 586.1055657852751 547.2376927289794 376.12696356223313 649.5014167794443 353.9285367613666 719.6946844585473 596.6801503953776 522.1445178173718 788.8071922737643 671.9650599591517 1.3785485209308703 0.8722262520924883 0.8143841478338852 0.5597418466744352 0.9665702214024744 0.5267067558287654 1.0710299200709885 0.8879630593168778 0.7770411721245039 1.173881261507429 1.0 9.39224240918626 -5.2618513314346655 6.081829207487921 0.8575150793212288 1.3918466443296675 0.38331850005888657 0.18714132507429665 0.08756898362456915 16.09225451001916 0.02189327675798227 0.19249034363550366 5.472032505591567e-06 5.2618513314346655 0.5343315650084387 DDKHGS(ph)YEDAVHSGALND ddPTM_A549_MK2206_60min_R1 4 DDKHGSYEDAVHSGALND 18 1 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 1 DDKHGS(0.998)YEDAVHS(0.002)GALND;DDKHGS(1)YEDAVHSGALND;DDKHGS(1)YEDAVHSGALND;DDKHGS(1)YEDAVHSGALND 147.11 1.9375e-17 120773000.0 7410.07 7659.719999999999 6892.12 6282.85 8817.97 7281.230000000001 6854.320000000001 7459.37 10683.18 9887.699999999999 10348.3 True False 8660.708657182277 8049.567030690642 7869.52625203174 7822.148532047854 7520.858294094229 8051.724925710695 8099.661220244827 8516.758540862545 8263.456787532872 7654.061702694114 7778.5315114493815 1.1134117853009144 1.034844047214094 1.0116981901337574 1.005607359246957 0.9668737965545453 1.0351214639754553 1.0412841046311592 1.0949057066011179 1.0623414940686065 0.983998289577916 1.0 12.925282102968968 -7.489843403270926 24.958337229231233 1.0370006137057068 1.0225725268441628 0.009121346001397024 0.04274935175335214 2511.504484081665 1897454.7185086147 0.006678284355647539 0.010669220302745891 3.2371035849349517e-08 7.489843403270926 -0.014428086861544065 DDKHGS(ph)YEDAVHSGALND ddPTM_A549_PD325901_60min_R1 3 DDKHGSYEDAVHSGALND 18 1 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 1 DDKHGS(1)YEDAVHSGALND;DDKHGS(1)YEDAVHSGALND;DDKHGS(1)YEDAVHSGALND 214.67 3.6471e-56 80420000.0 8853.1 8444.800000000001 10838.4 8482.7 10062.6 8543.9 8300.3 9125.3 8810.599999999999 9785.6 10654.199999999999 True False 9751.860194692243 9156.472933028175 11573.959000593806 9006.657113390527 9355.837690085451 8474.321311121019 8616.17245859844 8943.288732840632 8440.321121686826 9167.735545979061 9343.800942538379 1.0436716551073066 0.9799516266814526 1.2386778219881012 0.9639179140029644 1.0012882067609419 0.9069458310633538 0.922127142004133 0.9571360507184625 0.9033070346417172 0.9811569833687525 1.0 13.18979382447594 -6.483907253262603 24.85789021940772 0.9513598553345968 1.080787598012746 0.44831679515461575 0.06563741798583894 355.6951917412623 226879.20297110808 0.009163617638699564 0.021290432520530075 3.281653677254841e-07 6.483907253262603 0.12942774267814916 DDPDGKQEAKPQQAAGMLS(ph)PK ddPTM_A549_MK2206_60min_R1 10 DDPDGKQEAKPQQAAGMLSPK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK 149.44 1.2671e-22 546655600.0 18757.4 19718.28 18999.14 17778.94 27017.149999999998 19347.1 21432.66 20915.37 27250.33 27644.89 28231.71 True False 21923.190545599533 20721.856228416542 21693.50373992708 22134.78109812695 23042.963024402183 21394.397280434416 25326.696893155342 23880.187748134256 21078.173764835086 21399.89014879004 21220.997251442324 1.0330895520996066 0.9764789082665821 1.022265988864055 1.0430603630855528 1.0858567460978312 1.0081711536426643 1.1934734542899 1.1253094030023116 0.9932697090096682 1.0084299948408673 1.0 14.373204834855109 -8.844660472899173 24.999972757952992 0.9968214018569673 1.0597511729836988 0.18420737317631686 0.05641397286420137 32.21170590162473 9673.167821699897 0.010302665285375686 0.010967979870978898 1.4300114903582713e-09 8.844660472899173 0.06292977112673148 DDPDGKQEAKPQQAAGMLS(ph)PK ddPTM_A549_PD325901_60min_R1 8 DDPDGKQEAKPQQAAGMLSPK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK 143.01 3.0561000000000004e-22 884296900.0 64183.100000000006 62380.8 63894.8 61962.799999999996 76598.7 63430.7 69053.70000000001 68860.8 79580.0 74111.1 85442.4 True False 70698.9210628991 67637.84894143655 68231.08535864518 65790.10142827091 71218.67156316942 62914.14140958156 71681.57634113458 67487.31732374756 76235.52934690457 69431.71249812056 74933.5264639992 0.9434885077357923 0.9026380064193594 0.9105548421163108 0.8779795177513616 0.9504246620154128 0.8395993673113439 0.9566022009597137 0.900629137695407 1.0173754385299203 0.9265774049947868 1.0 16.193323727623625 -8.761316961703645 24.999995850682332 1.008205072989112 0.9094515714843555 0.33118333886557005 0.040305972615515724 1.2521239460652283 255693.75067592438 0.00493115896893634 0.005420084819628898 1.732539074985408e-09 8.761316961703645 -0.09875350150475659 DDPYRPAKPVPT(ph)PK ddPTM_A549_PD325901_60min_R1 1 DDPYRPAKPVPTPK 14 2 B4E1Q4;O14730-2;O14730 B4E1Q4 RIOK3 Serine/threonine-protein kinase RIO3 1 DDPY(0.005)RPAKPVPT(0.995)PK 41.912 0.030429 3118800.0 911.46 1102.3 1074.1 1276.7 1335.5 1433.1 1118.3 1303.3 1279.4 1584.9 1299.2 True False 1003.9907482186113 1195.194689522187 1146.9948850880014 1355.5588594039264 1241.6990872248844 1421.4293087427914 1160.8575184572412 1277.3046590809297 1225.6312672333474 1484.829143519274 1139.4066363073593 0.8811522736714875 1.048962373429409 1.0066598249815661 1.189705954142134 1.0897769485080753 1.2475171404560395 1.0188263623067888 1.121026171324117 1.0756750295973603 1.3031599924074304 1.0 10.15406699877409 -5.029017821372977 1.7863877289931211 1.0676438144378682 0.7148109461321237 0.20448837945155807 0.10302413775856392 1.7708905436199462 3.3591162400920562 0.011271026114565548 1.279337620025186 9.353672903502201e-06 5.029017821372977 -0.35283286830574445 DDRS(ph)PAREPGDVSAR ddPTM_A549_MK2206_60min_R1 3 DDRSPAREPGDVSAR 15 2 A0A1W2PR91;A0A1W2PQT1;C9J366;P0DPB3-2;P0DPB3;B3KU38-2;B3KU38 A0A1W2PR91 IQCJ-SCHIP1 1 DDRS(1)PAREPGDVSAR;DDRS(1)PAREPGDVSAR;DDRS(1)PAREPGDVSAR 93.26899999999999 5.1339999999999995e-06 31003300.0 1279.58 1306.73 923.94 1100.67 1695.4099999999999 1373.26 1088.71 1556.92 2079.1400000000003 1741.7 2164.6600000000003 True False 1495.5418212725776 1373.2369755048994 1054.9685851816582 1370.3341994109533 1446.0174348960459 1518.5774617037878 1286.514514509499 1777.6181778675298 1608.2181097043294 1348.2487603368163 1627.1151804232613 0.919137034222459 0.8439703544205638 0.6483674898216052 0.842186352815225 0.8887001069708498 0.9332943850408675 0.7906720618111608 1.0924968307437941 0.9883861505649427 0.8286129811572998 1.0 10.66810066495579 -7.763830403099588 0.9636044604163324 1.00048039365099 0.813256107658817 0.22941677496400692 0.09970819586607185 0.3316833275687934 0.6208199357239984 0.01539787806144171 0.026536081956049923 1.722541115421311e-08 7.763830403099588 -0.1872242859921731 DDRS(ph)PAREPGDVSAR ddPTM_A549_PD325901_60min_R1 2 DDRSPAREPGDVSAR 15 2 A0A1W2PR91;A0A1W2PQT1;C9J366;P0DPB3-2;P0DPB3;B3KU38-2;B3KU38 A0A1W2PR91 IQCJ-SCHIP1 1 DDRS(1)PAREPGDVSAR;DDRS(1)PAREPGDVSAR 100.67 1.5306e-06 23241400.0 1107.3899999999999 1615.51 1027.87 1262.81 1294.95 1413.9099999999999 1495.6999999999998 1105.44 1140.02 1466.42 1577.38 True False 1219.8114175825697 1751.6546973328373 1097.627439284428 1340.8109056504045 1203.9971793349785 1402.3955857403664 1552.619681978444 1083.3911319990968 1092.1089239263406 1373.829990939197 1383.3722598356696 0.8817665736101075 1.2662207767133598 0.7934432915510499 0.9692336217654668 0.8703349158367545 1.0137514148989488 1.1223440913603973 0.7831522746652391 0.7894541155943606 0.9931021683942063 1.0 10.433973716748744 -8.272248148772766 24.862910174872702 0.8889907773155008 0.9870872371579321 0.10454089402247646 0.13609247707948907 1232.6566632527083 2835418.539115814 0.022837602571886773 0.027748812686191608 5.34259005299592e-09 8.272248148772766 0.09809645984243132 DDS(ph)DLVR ddPTM_A549_MK2206_60min_R1 2 DDSDLVR 7 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 DDS(1)DLVR;DDS(1)DLVR 59.245 0.030781 2340500.0 156.32 323.4 222.26 191.161 265.37 302.28999999999996 165.875 343.57 536.78 141.46 430.14 True False 182.70299434293236 339.85967864691594 253.7798100985727 237.99545358154344 226.3344245335134 334.27812715613805 196.01234037922228 392.27209963899674 415.20018706152064 109.50408775176321 323.32436673993203 0.5650764777957198 1.0511415581625005 0.7849077774664045 0.7360888261569737 0.7000227876903782 1.0338785490455062 0.6062405452320456 1.2132463247179983 1.284159901859452 0.3386818285794201 1.0 8.336838427366096 -8.274360243459393 24.74623182241247 1.1438654369219472 0.7976195770182277 0.0 0.28885052553816415 417.4436457778587 799492.6606133606 0.027019321398664833 0.032770763433134315 5.316670631473883e-09 8.274360243459393 -0.3462458599037195 DDS(ph)DLVR ddPTM_A549_PD325901_60min_R1 1 DDSDLVR 7 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 DDS(1)DLVR 78.516 0.016738 1182100.0 192.63 178.72 243.7 118.31 345.05 178.45 103.72 155.45 185.96 0.0 208.13 True False 212.18565579328902 193.78136161789456 260.2389474871486 125.61773999849493 320.8148783578781 176.99676236490888 107.66712135776181 152.3494278018341 178.14474789331965 0.0 182.5313294447741 1.1624615699601697 1.0616334314078626 1.4257220844155711 0.6881982418064911 1.7575880224711917 0.9696788102256181 0.5898555699192293 0.8346481026860012 0.9759680622236325 0.0 1.0 7.512000297358899 -7.486562841871022 24.941995489584762 0.9398937562393551 1.2094815155824463 0.18931500795916556 0.389043661711985 694.6524553001576 477092.21056803333 0.03724360397029403 0.05952564259460741 3.2616485133147324e-08 7.486562841871022 0.2695877593430912 DDS(ph)FDSLDSFGSR ddPTM_A549_MK2206_60min_R1 1 DDSFDSLDSFGSR 13 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 DDS(0.973)FDS(0.026)LDSFGSR 58.486999999999995 0.011366 721230.0 1111.3 971.46 992.07 876.57 1234.1 848.47 908.01 931.61 1285.8 1484.3 1442.7 True False 1298.8602713235716 1020.9031645588518 1132.7604436447891 1091.3296893507222 1052.5655248023847 938.2545322311961 1072.9836635281843 1063.6685704359686 994.5683530006763 1148.9955991088789 1084.437773505602 1.1977268802845347 0.9414123977428733 1.044560113378361 1.0063552893614551 0.9706094259330477 0.8651990507469621 0.989437743448948 0.9808479531264445 0.9171280983560635 1.059531148010996 1.0 10.082731556270243 -2.9350790319047206 1.420679107570103 0.9629654954187391 199.98152541864138 0.53603526614761 0.056023305053173864 569.4785862855302 1.7384538822801967 0.007183896009299212 368748.9697931436 0.001161237275339588 2.9350790319047206 199.01855992322265 DDS(ph)HS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_MK2206_60min_R1 1 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 DDS(1)HS(1)AEDS(1)EDEKEDHK 65.454 0.00076229 3001100.0 607.75 383.56 498.13 537.91 580.69 432.2 175.65 250.43 450.97 905.54 762.83 True False 710.3233419390808 403.0815656827797 568.772324324674 669.6979741476973 495.27127023539146 477.935117128859 207.5633313495728 285.9292194097096 348.8260150511083 700.9778850751568 573.3982579630404 1.2387957795031639 0.7029696377430592 0.9919324246732111 1.1679456029858817 0.8637474274770386 0.8335133748516993 0.3619880745486181 0.49865728651749724 0.6083485783341753 1.2224974096805503 1.0 9.163393711318804 -7.117860696334767 3.130703162570937 0.747571561154549 1.0001267094508952 0.19524028645795755 0.25285710622962204 0.3534613079638769 6.5891807064921535 0.03709935197952304 0.06791774589803995 7.623234925861307e-08 7.117860696334767 0.2525551482963462 DDS(ph)HS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 3 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 DDS(1)HS(1)AEDS(1)EDEKEDHK;DDS(1)HS(1)AEDS(1)EDEKEDHK;DDS(1)HS(1)AEDS(1)EDEKEDHK 112.32 1.0685e-09 29641900.0 2557.73 2696.9799999999996 2813.5899999999997 2586.6 3619.94 2758.36 2477.14 2493.77 2898.7200000000003 3022.91 3262.19 True False 2817.388866698691 2924.2639696521337 3004.5371368911206 2746.368407405181 3365.687902515049 2735.8968306913434 2571.4089182430193 2444.02980102528 2776.8968789703363 2832.0429467069516 2860.9613107262185 0.9847699988587167 1.0221263596570087 1.050184469683883 0.9599460143374153 1.1764185310358888 0.9562858541407088 0.8987919230513117 0.8542687354289648 0.9706167184293228 0.9898920814095433 1.0 11.482284272640964 DDS(ph)HSAEDS(ph)EDEKEDHKNVR ddPTM_A549_MK2206_60min_R1 1 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.888)HS(0.112)AEDS(1)EDEKEDHKNVR 190.33 1.7823999999999998e-44 345630000.0 6489.7 6476.1 6244.6 5990.9 9781.0 7108.6 5431.7 5023.2 11120.0 10967.0 10452.0 True False 7585.0027020683765 6805.705828340417 7130.178179346473 7458.670768941724 8342.22785681235 7860.827333693215 6418.569580936378 5735.253982904821 8601.33775499108 8489.547083087711 7856.479939474982 0.9654454361879594 0.8662538287847033 0.9075537943552562 0.949365469828993 1.0618276786906464 1.0005533514056837 0.8169777852656627 0.7300030073376711 1.0948080846962456 1.0805789804708692 1.0 12.939667348880766 DDS(ph)HSAEDS(ph)EDEKEDHKNVR ddPTM_A549_PD325901_60min_R1 2 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.752)HS(0.248)AEDS(1)EDEKEDHKNVR;DDS(0.67)HS(0.33)AEDS(1)EDEKEDHKNVR 210.31 8.935499999999999e-67 957680000.0 15160.4 15811.5 17743.0 16157.7 19867.4 19867.6 17058.8 19788.1 20556.7 21243.9 20816.1 True False 16699.472647503393 17143.990595464078 18947.146677326513 17155.72443220084 18471.982362809165 19705.804852681784 17707.981968933545 19393.410822035865 19692.773386849884 19902.556528493347 18255.85166412992 0.9147462936673294 0.9390956341494334 1.0378670371514294 0.9397383780187769 1.0118389819689382 1.0794240233338885 0.9699893653127748 1.0623120289775951 1.078710199291513 1.090201481402205 1.0 14.156071353879963 -5.044855758463595 0.5403100241159413 1.0374596602255661 0.7988347526911976 0.4789092551126988 0.04364438517892833 3.2251447160668354 0.5330169608892539 0.008102015434412189 0.5085586756729704 9.01870624727097e-06 5.044855758463595 -0.2386249075343685 DDS(ph)PVSHR ddPTM_A549_MK2206_60min_R1 2 DDSPVSHR 8 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 1 DDS(0.99)PVS(0.01)HR;DDS(0.904)PVS(0.096)HR 96.89 0.0024735 8319600.0 649.81 704.02 472.89 402.83000000000004 780.6700000000001 466.51 539.06 632.88 843.59 720.37 578.64 True False 759.482041670809 739.8516108874513 539.9529127936379 501.5233680837256 665.8344771472957 515.8757785557245 637.0002242943395 722.5926781137129 652.5182119364136 557.6379166813064 434.94771834843124 1.7461455932098886 1.7010127417078789 1.24142026734599 1.1530658672911152 1.530837958354121 1.1860638803086279 1.4645443519352976 1.6613322650766333 1.5002221747803017 1.2820803355372232 1.0 8.764698186109703 -10.666802252827141 0.8935450176065767 0.9946969351063062 1.4556283864626982 0.22651756385458455 0.20802831130352978 0.47815187911581614 0.668305845603478 0.1442117211222173 0.036731838358876646 2.1537621833662132e-11 10.666802252827141 0.460931451356392 DDS(ph)PVSHR ddPTM_A549_PD325901_60min_R1 1 DDSPVSHR 8 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 1 DDS(0.993)PVS(0.007)HR 45.368 0.050325999999999996 4402000.0 225.78 265.87 198.51 190.25 177.81 349.45 174.15 190.54 155.93 156.56 408.65 True False 248.7010193895488 288.2757979708461 211.9820823376029 202.00131041090071 165.32123901119922 346.6041950597784 180.77737354853662 186.73953022426167 149.37680436118166 146.67477488130328 358.3886406457838 0.693942249233715 0.8043664482540497 0.5914866106125194 0.5636375919920695 0.46129039891807216 0.9671182502749783 0.5044171411872659 0.5210531502554712 0.4168011689545132 0.4092617852424358 1.0 8.485381100764807 -10.97505464565105 1.2592240318747059 0.9988617770652892 0.5974992430610149 0.0 0.2299239290084432 0.3276646424378727 0.9284275844706581 0.1116984795466597 0.02606982371084948 1.0591204516258992e-11 10.97505464565105 -0.40136253400427435 DDSFDS(ph)LDSFGSR ddPTM_A549_MK2206_60min_R1 1 DDSFDSLDSFGSR 13 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 DDS(0.007)FDS(0.554)LDS(0.436)FGS(0.003)R 64.22399999999999 0.0060908 2555500.0 712.16 678.53 712.09 715.78 822.0 780.89 648.35 672.85 1566.1 935.47 836.65 True False 832.3551973596639 713.0642787640434 813.0750696170821 891.1461321325847 701.0848888968158 863.5232614871696 766.1468026216655 768.2285480167043 1211.3808505477984 724.1466772878688 628.8867146346861 1.3235375751945573 1.1338517131471846 1.292880022261862 1.4170217169402959 1.1148031475018023 1.3730982725382925 1.2182588450238012 1.2215690523259988 1.9262306268490301 1.1514739625379402 1.0 9.296656348446437 DDSFDSLDS(ph)FGSR ddPTM_A549_MK2206_60min_R1 1 DDSFDSLDSFGSR 13 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 DDSFDS(0.013)LDS(0.982)FGS(0.005)R 74.987 0.0011045 2694200.0 657.76 586.86 866.35 602.7 834.04 535.21 843.19 735.66 851.15 1104.1 1070.8 True False 768.7738073119705 616.7286673182717 989.2114572073177 750.361527056231 711.3538208461068 591.8455669563555 996.3867085718541 839.9420578642615 658.3658840072529 854.6830431692471 804.8908074234414 0.9551280747918018 0.7662265013219609 1.2290008136307462 0.9322525740581314 0.8837892224452675 0.7353116242573685 1.2379153785609947 1.0435478329700691 0.8179567687134687 1.0618621001588986 1.0 9.65264926831416 -8.746114122160202 24.99087659824821 0.914035124092064 0.9711337192692007 0.0 0.16191511848432247 865.8936140487853 1412010.8553206888 0.027053237110330107 0.030619218751644542 1.7942620758950148e-09 8.746114122160202 0.05709859517713667 DDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_MK2206_60min_R1 7 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.093)HS(0.907)AEDS(1)EDEKEDHK;DDS(0.01)HS(0.99)AEDS(1)EDEKEDHK;DDS(0.008)HS(0.992)AEDS(1)EDEKEDHK;DDSHS(1)AEDS(1)EDEKEDHK;DDS(0.012)HS(0.988)AEDS(1)EDEKEDHK;DDS(0.004)HS(0.996)AEDS(1)EDEKEDHK;DDS(0.113)HS(0.887)AEDS(1)EDEKEDHK 210.38 4.5951e-55 1444348200.0 32303.399999999998 29056.97 28226.370000000003 27443.739999999998 30857.989999999998 24255.180000000004 21486.559999999998 29215.5 24618.109999999997 41514.4 39788.5 True False 37755.42417769629 30535.845660646482 32229.29370274474 34167.45753199631 26318.82054833216 26821.84704831458 25390.38982546243 33356.88659371631 19042.147392043466 32136.268206996996 29907.917343264493 1.2623889435149558 1.0209953876150926 1.0776174526911029 1.1424218256270895 0.8799950944848848 0.8968142696286767 0.8489521197362996 1.1153196062054969 0.6366925243737145 1.0745070557122676 1.0 14.86823983052304 -6.736842410591776 0.8699354526023977 0.8464003278011609 1.156227566855067 0.20593037431040506 0.1457132091364264 0.558485369987626 0.7720474086256427 0.026592636790003753 0.10098948912267461 1.8329794221647373e-07 6.736842410591776 0.3098272390539061 DDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 8 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.01)HS(0.99)AEDS(1)EDEKEDHK;DDS(0.001)HS(0.999)AEDS(1)EDEKEDHK;DDS(0.004)HS(0.996)AEDS(1)EDEKEDHK;DDS(0.115)HS(0.885)AEDS(1)EDEKEDHK;DDSHS(1)AEDS(1)EDEKEDHK;DDS(0.13)HS(0.871)AEDS(0.999)EDEKEDHK;DDS(0.046)HS(0.954)AEDS(1)EDEKEDHK;DDS(0.156)HS(0.844)AEDS(1)EDEKEDHK 240.44 3.7031e-74 3084079500.0 35600.5 38720.81 38078.73 38329.219999999994 44365.88 29941.31 34142.37 34761.53999999999 39842.83000000001 38636.1 39190.71 True False 39214.636552297045 41983.94854939449 40662.981603805114 40696.728867425496 41249.773642777014 29697.477898369692 35441.67657377173 34068.1938147994 38168.37441227359 36196.61005232191 34370.5011203796 1.140938749043876 1.221511097622623 1.1830779382990857 1.1840598053804583 1.200150486555415 0.8640397122624699 1.0311655465726388 0.9912044545256585 1.1104980482708784 1.053130122413593 1.0 15.068883265842613 DDSHS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_A549_MK2206_60min_R1 3 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.226)HS(0.774)AEDS(1)EDEKEDHKNVR;DDS(0.006)HS(0.994)AEDS(1)EDEKEDHKNVR;DDS(0.031)HS(0.969)AEDS(1)EDEKEDHKNVR 206.49 4.8046e-56 560740000.0 20531.100000000002 22234.100000000002 21449.699999999997 17463.1 29784.6 21108.600000000002 18480.8 17214.4 34167.6 36060.3 37695.1 True False 23996.24774279798 23365.720720480494 24491.589996721636 21741.560283948358 25403.324795421042 23342.29804124534 21838.522140650057 19654.593916888993 26428.693154445424 27914.253185033966 28334.36633816528 0.8468955139637612 0.8246424303834805 0.864377544372059 0.7673212107328241 0.896555246453624 0.8238157777258699 0.7707432691457237 0.6936662596338011 0.932743398564979 0.9851730175251726 1.0 14.790265318329737 -8.943142568879352 7.9662748811962585 0.9705779322708612 0.8133853417166813 0.6585458474949838 0.05244403005106316 0.11401024798796731 13.877125454560066 0.009654778724818848 0.010208153784562102 1.139875531241884e-09 8.943142568879352 -0.1571925905541799 DDSHS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_A549_PD325901_60min_R1 4 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.016)HS(0.984)AEDS(1)EDEKEDHKNVR;DDS(0.083)HS(0.917)AEDS(1)EDEKEDHKNVR;DDS(0.006)HS(0.994)AEDS(1)EDEKEDHKNVR;DDS(0.073)HS(0.927)AEDS(1)EDEKEDHKNVR 219.16 1.3271999999999998e-67 581223000.0 32667.4 33584.2 35644.4 33620.7 41760.299999999996 38638.1 37867.799999999996 43686.5 41959.0 45185.399999999994 46315.6 True False 35983.770399531175 36414.45839776015 38063.44333118964 35697.37428085029 38827.20059321401 38323.44412402121 39308.87985105525 42815.13848610375 40195.609146352974 42332.38613261138 40619.07481877856 0.8858835549571789 0.8964866521510585 0.9370829715105322 0.8788327759830481 0.9558858926856663 0.9434839246093302 0.9677443424408674 1.0540648372008201 0.9895747090667409 1.0421799689302804 1.0 15.309869759273106 -7.375475546174563 1.1745847312934337 0.9991600554796654 0.9018810628898182 0.7393046298926269 0.028825288276299176 0.16923010152755727 0.4620434232394951 0.004139871706335998 0.008280983613149525 4.2123500457158564e-08 7.375475546174563 -0.09727899258984718 DDSHS(ph)AEDSEDEKEDHK ddPTM_A549_MK2206_60min_R1 2 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDS(0.001)HS(0.867)AEDS(0.131)EDEKEDHK;DDSHS(1)AEDSEDEKEDHK 194.49 2.0644999999999998e-47 30964000.0 2200.81 2428.0 1969.12 1910.46 2634.1 1660.89 1506.75 2019.68 1719.8200000000002 2752.5 3114.6 True False 2572.252923361495 2551.574829173504 2248.370825435533 2378.5227857638083 2246.627379371169 1836.6442773904473 1780.50697131209 2305.9758250105915 1330.283515988197 2130.708338305727 2341.1588614130087 1.0987092613651213 1.0898768431431853 0.960366621203367 1.0159595852150967 0.9596219275847068 0.7845022000266735 0.760523773357893 0.9849719568448326 0.5682158258945756 0.9101083969243061 1.0 11.193007117786367 -7.050353243287136 2.2738370605910423 0.8029881627121964 1.0421619169170397 0.38586608194552463 0.1184846744965743 0.2896971021119615 2.9660485813540958 0.02445163099512425 0.047995947070812756 8.905263136624535e-08 7.050353243287136 0.23917375420484333 DDSHS(ph)AEDSEDEKEDHK ddPTM_A549_PD325901_60min_R1 3 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDS(0.001)HS(0.999)AEDSEDEKEDHK;DDSHS(0.995)AEDS(0.005)EDEKEDHK;DDSHS(1)AEDSEDEKEDHK 250.22 2.4695999999999994e-86 81081000.0 4972.61 4785.78 5448.959999999999 5280.5 6170.1900000000005 4351.66 4888.73 5440.2 4426.93 5286.9 4870.54 True False 5477.425706557997 5189.094476296368 5818.759192858319 5606.664492114379 5736.817140399933 4316.221523748273 5074.773295365702 5331.690943245663 4240.881527163766 4953.084231732002 4271.494456896891 1.2823206870171564 1.2148194334930928 1.3622303040714858 1.3125767921954528 1.3430468418698485 1.0104710581513607 1.1880556902448536 1.248202706815397 0.992833203919135 1.1595670512306517 1.0 12.060525194869653 -8.13480401665341 0.6451496990282468 0.987801671480573 1.3000315328842347 0.375455521909288 0.10351307331283394 0.3057793522914954 0.26331741812338805 0.022482923481292428 0.03386078606620072 7.331553082724244e-09 8.13480401665341 0.3122298614036617 DDSHS(ph)AEDSEDEKEDHKNVR ddPTM_A549_MK2206_60min_R1 1 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDS(0.041)HS(0.91)AEDS(0.049)EDEKEDHKNVR 85.06200000000001 3.1759e-05 170540000.0 461.45 490.83 698.05 656.01 689.44 524.22 487.75 602.35 854.04 987.27 1214.8 True False 539.331478630669 515.8111504955648 797.0439864991837 816.7324794494078 588.0242892956455 579.692612450927 576.3678614617372 687.734957119509 660.6013036216351 764.2450213112062 913.1316332256227 0.590639354728616 0.5648814822825382 0.8728686615352911 0.8944301672742555 0.6439644273613205 0.6348401384400321 0.6311990960445945 0.7531608062794806 0.7234458643033443 0.8369494534008454 1.0 9.834679037840843 -10.516862993789278 0.5980831807454972 1.0286520035720015 0.6971875156736388 0.33073854411819636 0.11141889905223609 0.6537839141918022 0.3710179733859479 0.11353995526064861 0.02386830635991274 3.041844480318552e-11 10.516862993789278 -0.3314644878983627 DDSHS(ph)AEDSEDEKEDHKNVR ddPTM_A549_PD325901_60min_R1 1 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDS(0.07)HS(0.929)AEDS(0.001)EDEKEDHKNVR 66.467 0.00080799 7207800.0 534.59 644.85 849.76 712.74 1195.5 860.33 727.58 1107.4 790.54 764.13 1240.9 True False 588.8611832556421 699.1937726012715 907.4298236219909 756.7643310500151 1111.5322042511034 853.3237577215019 755.2684550470525 1085.3120382615061 757.3163529769027 715.8827013927585 1088.27716671321 0.5410948619220849 0.6424776646862497 0.8338223491011852 0.6953783045320868 1.0213686717402404 0.7841051745105441 0.6940037686613395 0.9972753922048563 0.6958855484068754 0.6578128470294485 1.0 10.087830319300402 -14.999052226809155 0.03143060908697925 2.0992177748522054 5.755047737145793e-06 0.05601442607405149 0.15202265940342535 955.0675710566906 2.3201760962265223 121.92018810459582 48.6485234688603 1.002184711432636e-15 14.999052226809155 -2.0992120198044684 DDSHSAEDS(ph)EDEK ddPTM_A549_PD325901_60min_R1 2 DDSHSAEDSEDEK 13 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDSHSAEDS(1)EDEK;DDSHSAEDS(1)EDEK 102.38 4.1016e-05 5578200.0 610.9000000000001 663.1300000000001 226.09 498.17 657.5699999999999 531.47 421.21 553.18 584.38 642.54 654.16 True False 672.9181182791891 719.0142923549372 241.43382698961577 528.9408294738416 611.3845516933483 527.1418845283167 437.23937704495586 542.1463909386854 559.8205408361911 601.9699147434378 573.7024670619006 1.1729392096314333 1.253287781796061 0.4208345629504951 0.9219776100714774 1.0656822774781303 0.9188419342659717 0.7621361283039055 0.944995746166435 0.9758029169775005 1.0492719646584459 1.0 9.16415891172193 -8.748046323061187 3.8981308330408075 0.9891436418030836 0.9235586602473438 0.022962161677994364 0.20756687733383536 0.9187474411037319 30.229492013948207 0.03605979496837935 0.03959653215273011 1.7862970332647757e-09 8.748046323061187 -0.06558498155573977 DDSHSAEDS(ph)EDEKEDHK ddPTM_A549_MK2206_60min_R1 9 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHS(0.018)AEDS(0.982)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK 356.45 1.5702999999999994e-244 1355083000.0 46974.2 56625.399999999994 49891.24999999999 37947.170000000006 51686.7 39216.61 37900.229999999996 61865.6 39450.75 59360.6 57825.99999999999 True False 54902.29655107329 59507.39099336137 56966.579459103814 47244.2283535132 44083.65489895748 43366.48564032113 44786.21120247664 70635.23825545388 30515.21811490236 45950.999232272814 43466.20828358979 1.2631029647875007 1.369049506345548 1.3105946368137877 1.0869185562557975 1.0142052099722902 0.9977057432150964 1.030368485566412 1.6250609621755636 0.7020446300677913 1.0571660387874489 1.0 15.407606629086514 -6.704943906476854 0.37580499484754093 0.8828260734616044 1.4328245595680116 0.0626869890229671 0.22621298383504732 2.298102208421297 0.4488198456681405 0.0809238074051125 0.492058020930358 1.9726775109058473e-07 6.704943906476854 0.5499984861064072 DDSHSAEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 9 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDS(0.007)HS(0.034)AEDS(0.959)EDEKEDHK 346.99 9.510599999999997e-219 1998050000.0 67524.4 73755.4 73364.5 66807.5 81141.2 42588.59999999999 47499.399999999994 71316.4 50284.4 61839.600000000006 66961.1 True False 74379.42737916418 79971.02640259877 78343.45614657717 70934.047544159 75442.12203394355 42241.77256180532 49307.01565966901 69893.93845536659 48171.12153671138 57935.03710238781 58725.30920138603 1.266565104392991 1.3617812743795872 1.3340663031320084 1.207895684310587 1.284661129245497 0.7193111988043536 0.8396212183503542 1.1901842562578957 0.8202787212497886 0.986542904418125 1.0 15.841694783906664 -7.238431583090886 23.336238432411402 0.9175452705175497 1.2927029960020986 0.7005234882833327 0.11876028175761653 149.71265802182367 151849.5468807218 0.018096234327194097 0.03132521651201959 5.775218458880744e-08 7.238431583090886 0.37515772548454884 DDSHSAEDS(ph)EDEKEDHKNVR ddPTM_A549_MK2206_60min_R1 7 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHS(0.001)AEDS(0.999)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHS(0.003)AEDS(0.996)EDEKEDHKNVR 329.86 1.9588999999999992e-206 851428900.0 17252.67 21625.679999999997 19311.3 16008.380000000001 25897.82 14258.86 15042.12 16118.229999999998 24613.609999999997 28551.74 26858.280000000002 True False 20164.49890871596 22726.33474125241 22049.932721841833 19930.433818643487 22088.284984634705 15767.723100934756 17775.078495644953 18403.038462509146 19038.66663485845 22101.882103955366 20188.627825182 0.9988048263272284 1.125699821604767 1.092195711010045 0.9872109185045029 1.094095407370044 0.7810200493798349 0.8804500558216968 0.9115546941508514 0.9430391604480834 1.0947689112574008 1.0 14.301255236871679 DDSHSAEDS(ph)EDEKEDHKNVR ddPTM_A549_PD325901_60min_R1 9 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDS(0.005)HS(0.157)AEDS(0.838)EDEKEDHKNVR;DDSHS(0.002)AEDS(0.998)EDEKEDHKNVR;DDSHS(0.001)AEDS(0.999)EDEKEDHKNVR 319.52 4.302899999999999e-184 1688331100.0 24448.73 25848.059999999998 27003.66 26200.62 31206.510000000002 23720.579999999994 24950.12 32378.780000000002 27056.269999999997 32073.79 31847.14 True False 26930.747071396225 28026.366729974445 28836.29075379896 27818.972791474665 29014.67239421505 23527.40746101323 25899.610469829528 31732.95983223848 25919.189062613408 30048.645425652743 27930.143675653886 0.9642179927227222 1.0034451328084084 1.0324433375161954 0.996019680905683 1.038830044383428 0.8423661451309172 0.9272995789278975 1.1361545504651103 0.9280005632483236 1.07585001261005 1.0 14.769535374564384 DDSLDLS(ph)PQGR ddPTM_A549_MK2206_60min_R1 2 DDSLDLSPQGR 11 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 DDSLDLS(1)PQGR;DDSLDLS(1)PQGR 153.75 1.0307e-12 51057000.0 3911.2 5182.0 4388.0 4091.8 5978.8 4727.7 5069.7 4847.4 7158.5 6242.4 6760.7 True False 4571.3149403408215 5445.741665888426 5010.284381861501 5094.291183687883 5099.326440068466 5227.982076006727 5990.798866740274 5534.533794539899 5537.111179775504 4832.237504464912 5081.831604172266 0.8995408144944625 1.0716100197844776 0.9859209773397403 1.0024517891355131 1.0034426240888887 1.0287594086577896 1.1788660729768634 1.0890824855345376 1.0895896619694059 0.9508850117145885 1.0 12.311132854494376 -7.523178378957433 24.999997517630177 1.0589818996951306 0.9990541664313389 0.2000525664531485 0.06519163303218241 14.7959538622612 1234500.2420765923 0.009543116420892016 0.014231245141624636 2.997930917730431e-08 7.523178378957433 -0.05992773326379164 DDSLDLS(ph)PQGR ddPTM_A549_PD325901_60min_R1 2 DDSLDLSPQGR 11 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 DDSLDLS(1)PQGR;DDSLDLS(1)PQGR 186.76 9.640799999999999e-19 70288000.0 7232.2 6823.4 7320.4 6845.799999999999 7875.6 6340.700000000001 6534.6 7661.200000000001 6876.8 7467.5 7647.799999999999 True False 7966.407619935756 7398.431864724378 7817.206365141239 7268.649518060154 7322.445025345033 6289.063441452381 6783.277778870328 7508.391355904868 6587.792010716176 6996.000775588478 6707.169083398566 1.187745160570654 1.1030632704693266 1.1655001190428034 1.0837134754886906 1.091734073540711 0.937662874344249 1.0113473649650706 1.1194575926957722 0.9822015710058855 1.0430631297047248 1.0 12.71148825658294 -6.841982635583259 1.7842122004371854 1.0006106626694002 1.1444741131041198 0.5392747162752392 0.05066681000715176 0.16925111364469078 1.0910320947426866 0.0072870774224157685 0.016734899206452273 1.4388561069572992e-07 6.841982635583259 0.1438634504347196 DDSLDLS(ph)PQGRLS(ph)DVLK ddPTM_A549_PD325901_60min_R1 2 DDSLDLSPQGRLSDVLK 17 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 DDS(0.017)LDLS(0.985)PQGRLS(0.998)DVLK;DDS(0.102)LDLS(0.899)PQGRLS(1)DVLK 56.055 0.0029222 4559500.0 738.88 1118.49 934.51 944.0 1190.53 1229.27 959.03 1232.1799999999998 1163.43 1129.49 1441.3000000000002 True False 813.8905536652928 1212.749077640996 997.931468265142 1002.3087360204477 1106.9112799055342 1219.2592326831702 995.526411451353 1207.6032032734902 1114.5350830368084 1058.1738086400305 1264.029237153476 0.6438858609774956 0.9594311919335345 0.7894844825839855 0.7929474307711359 0.8757006937578732 0.9645815119188814 0.787581791773443 0.9553601829598071 0.8817320440678095 0.8371434596109338 1.0 10.30381411827877 -2.000000369699847 0.03747905172326433 1.4033150160138372 6.0455646163306134e-09 0.16327126521369173 0.09234450817567642 485.1350043738857 1.3492706321885597 14.217222807014286 44.11830013555731 0.009999991487350052 2.000000369699847 -1.4033150099682725 DDSLDLS(ph)PQGRLS(ph)DVLKR ddPTM_A549_PD325901_60min_R1 1 DDSLDLSPQGRLSDVLKR 18 2 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 DDS(0.018)LDLS(0.983)PQGRLS(1)DVLKR 43.497 0.019514 2845000.0 333.64 245.2 291.67 280.47 285.3 299.65 344.95 287.52 273.85 303.06 287.5 True False 367.5108871872137 265.8638645294746 311.464480154192 297.7939949064144 265.2615122315683 297.20974974864083 358.0772610138827 281.7851880449233 262.34103683902754 283.924739879457 252.13932261265825 1.4575706929767227 1.0544323740327497 1.235287209177881 1.18106922720615 1.0520434079180447 1.1787520751184881 1.4201563536520188 1.1175773184645525 1.0404606235975393 1.1260629121131898 1.0 7.978077322308012 -8.6066718409092 3.980806764114641 1.0193127302523748 1.212545557144683 0.25219896211131776 0.12432402199959487 0.1764416964419827 5.417036703227666 0.019514893700737976 0.022232290713039806 2.473592520750986e-09 8.6066718409092 0.19323282689230825 DDSLDLSPQGRLS(ph)DVLK ddPTM_A549_PD325901_60min_R1 2 DDSLDLSPQGRLSDVLK 17 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 DDSLDLS(0.043)PQGRLS(0.957)DVLK;DDSLDLSPQGRLS(1)DVLK 137.45 4.0082e-13 27730710.0 5329.57 4965.7 4446.259999999999 4631.15 5541.6900000000005 5212.5 4990.06 5079.89 4389.66 5460.780000000001 5084.03 True False 5870.6240229779305 5384.176966125663 4748.009941133395 4917.205617395228 5152.460812192636 5170.0511281988665 5179.959463965607 4978.56760885339 4205.1778556538475 5115.985418857455 4458.726540321508 1.3166593577534391 1.2075593597039533 1.0648802742657162 1.102827359544831 1.1555902264015285 1.1595353698964608 1.1617576043567124 1.1165895831087227 0.9431342823169915 1.1474095512680969 1.0 12.122416004605453 -8.65074053060342 4.401544268539431 0.9732558228218158 1.160044742798769 0.2884218987722159 0.08059329887128575 0.10022661244931684 3.4226493762549146 0.011038395686802817 0.01248515455689354 2.2349070700823252e-09 8.65074053060342 0.18678891997695324 DDSLDLSPQGRLS(ph)DVLKR ddPTM_A549_MK2206_60min_R1 3 DDSLDLSPQGRLSDVLKR 18 2 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 DDSLDLS(0.002)PQGRLS(0.998)DVLKR;DDSLDLSPQGRLS(1)DVLKR;DDSLDLS(0.161)PQGRLS(0.839)DVLKR 109.66 5.9327e-10 21899200.0 1508.83 1566.47 1737.5100000000002 1280.8899999999999 1886.26 1471.1200000000001 1654.8200000000002 1666.53 2481.04 2265.71 2630.53 True False 1763.4836166481998 1646.1966320656588 1983.9150447420643 1594.7081075013361 1608.7936527135128 1626.7929419495765 1955.4793736629651 1902.7657310340755 1919.0884014067508 1753.8845373960658 1977.2968020653575 0.8918659124953714 0.8325490793016745 1.0033471164621284 0.8065092230137662 0.8136328602934421 0.8227358382668363 0.9889660326261575 0.9623065839415552 0.9705616270669097 0.8870112648561765 1.0 10.9493137276711 -7.771501365231747 24.99441620061107 0.9837780492570212 0.8621799260361315 0.389236764216191 0.05953523381596442 111.9448520029059 278075.6186936884 0.008034164312199577 0.011170635477886126 1.692382924316951e-08 7.771501365231747 -0.1215981232208897 DDSLDLSPQGRLS(ph)DVLKR ddPTM_A549_PD325901_60min_R1 2 DDSLDLSPQGRLSDVLKR 18 2 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 DDSLDLSPQGRLS(1)DVLKR;DDSLDLS(0.001)PQGRLS(0.999)DVLKR 89.66799999999999 1.2904e-06 40689000.0 1953.3 1633.23 1505.6 1808.33 1925.9099999999999 1841.88 1846.96 1979.9899999999998 1758.96 2052.0 1852.4099999999999 True False 2151.5975780565404 1770.8680239211835 1607.7790699082916 1920.0264370845948 1790.6407256288107 1826.8803399533676 1917.2470734952933 1940.4975461778945 1685.0370281481685 1922.4363698034883 1624.5753133944834 1.3244061757659396 1.090049817524943 0.9896611481488681 1.1818636053706728 1.1022208147970318 1.1245279457904456 1.1801527806607404 1.194464504156046 1.0372169355616716 1.1833470285761247 1.0 10.665846911519482 -8.883793196557356 5.815627863778018 1.0162139425416612 1.1408052721634059 0.023134464159306756 0.09307890632906435 0.17106462446375748 8.051726268838337 0.013432420505970837 0.014225203117814889 1.3067930119929039e-09 8.883793196557356 0.12459132962174468 DDT(ph)SPPKDK ddPTM_A549_PD325901_60min_R1 2 DDTSPPKDK 9 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 DDT(0.592)S(0.408)PPKDK;DDT(0.564)S(0.436)PPKDK 72.29 0.001076 65793000.0 21581.0 21202.3 20976.6 22286.7 26588.5 22085.8 21076.1 21725.5 23165.2 23570.1 26062.2 True False 23771.887232907502 22989.092230478316 22400.198218542948 23663.29884223191 24721.01548534543 21905.94056732366 21878.16251878445 21292.16785917496 22191.64720315299 22081.879863501563 22856.714621897805 1.0400395518843693 1.0057916288832556 0.9800270331538596 1.0352887207841044 1.0815646909141323 0.9584028557777391 0.9571875433849161 0.9315497966963311 0.970902755284539 0.9661003442002153 1.0 14.480330427925825 -7.298814093090803 24.999233815782517 0.9772168225893506 1.0249579466791978 0.520218689104669 0.029306800246810573 495.5590633263103 331468.7977295164 0.004870604194586246 0.007786328094508452 5.025576715767584e-08 7.298814093090803 0.04774112408984721 DDTIYEDEDVKEAIR ddPTM_A549_MK2206_60min_R1 2 DDTIYEDEDVKEAIR 15 1 E5RHG9;B7Z2R2;P14927;P14927-2 E5RHG9 UQCRB Cytochrome b-c1 complex subunit 7 0 ; 60.401 0.0056703000000000005 1726630.0 1354.1100000000001 1189.44 1443.77 1345.8200000000002 1863.0900000000001 1618.75 1625.91 1528.72 2147.3999999999996 1628.48 2057.5 False True 1582.6506631890243 1249.9774154909942 1648.5182958067862 1675.5459604161551 1589.0319290203995 1790.045050560714 1921.316800880067 1745.4207415086512 1661.017328693151 1260.6052369715212 1546.5659658888032 1.023332142369681 0.8082276754180601 1.0659217467386795 1.0833976677181227 1.0274582294374952 1.1574320721146767 1.2423115749711306 1.1285782695376767 1.0740035441931979 0.8150995591365274 1.0 10.594852654869733 -5.796618788918098 22.430941477824987 1.0681091486329535 0.9157802386504683 0.21378699966019 0.1110671496671238 45.75044123654462 29171.242017267432 0.012216863145093456 0.03798875927560734 1.5972805785769067e-06 5.796618788918098 -0.15232890998248516 DDVGS(ph)PRPR ddPTM_A549_MK2206_60min_R1 3 DDVGSPRPR 9 1 A0A1C7CYW6;A0A1B0GWB1;A0A1B0GTQ2;P0DI83 A0A1C7CYW6 RAB34 Ras-related protein Rab-34, isoform NARR 1 DDVGS(1)PRPR;DDVGS(1)PRPR;DDVGS(1)PRPR 135.99 1.2522e-05 64025000.0 3730.5699999999997 4542.92 4390.8 3719.54 5988.34 4685.12 4192.29 4195.860000000001 5959.8 6784.8 7296.1 True False 4360.199012320326 4774.13522361981 5013.481463964787 4630.827466976495 5107.463118706028 5180.8962886690415 4953.974827119274 4790.636004282334 4609.914815844945 5252.108967751754 5484.277007883987 0.7950362474492574 0.8705131445323961 0.9141554040318528 0.8443824883971752 0.9312919663546779 0.9446817294642819 0.9033049971760415 0.8735218876427101 0.8405692872949175 0.9576666095096078 1.0 12.421085727370691 -10.896784731110339 1.103938947131595 1.0011665551889841 0.880088084564633 0.435232178242023 0.04279435657375952 0.33675206975482885 0.7172870223712824 0.031801537770865584 0.007305308185952519 1.2682803648684652e-11 10.896784731110339 -0.12107847062435106 DDVGS(ph)PRPR ddPTM_A549_PD325901_60min_R1 3 DDVGSPRPR 9 1 A0A1C7CYW6;A0A1B0GWB1;A0A1B0GTQ2;P0DI83 A0A1C7CYW6 RAB34 Ras-related protein Rab-34, isoform NARR 1 DDVGS(1)PRPR;DDVGS(1)PRPR;DDVGS(1)PRPR 110.84 9.6222e-05 80724300.0 4661.2 4580.1 4705.9 5150.8 5643.299999999999 5090.5 5162.9 5092.3 5413.799999999999 5239.5 5344.0 True False 5134.401592605921 4966.081100862348 5025.2706728755475 5468.953217684451 5246.934076328104 5049.0446557498935 5359.376984747284 4990.730081667933 5186.27681299663 4908.677075821333 4686.721878407115 1.0955208620894228 1.059606528764233 1.072235733899255 1.1669037249428582 1.1195317777447016 1.0773083589645227 1.1435235808293336 1.0648658510464337 1.1065894131442038 1.0473583035590017 1.0 12.194363468950327 -10.72561848398245 0.6650858459986763 0.988555546975613 1.1023499122594962 0.4044792800649273 0.03434299877532422 0.5506703393996829 0.3627789056395684 0.03630355123664691 0.006434046005161924 1.8809684714241975e-11 10.72561848398245 0.1137943652838832 DDY(ph)PSR ddPTM_A549_PD325901_60min_R1 2 DDYPSR 6 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DDY(1)PSR;DDY(1)PSR 88.029 0.040808 4874500.0 690.1700000000001 798.87 961.1800000000001 773.6700000000001 745.1500000000001 1006.15 982.48 720.4100000000001 840.6800000000001 845.72 986.81 True False 760.2355503237 866.1935785345089 1026.4114548448808 821.4578387679452 692.8132346279466 997.9562479879694 1019.868814033685 706.0408573992878 805.3491431434502 792.3210948685215 865.4386259039908 0.8784395883990025 1.0008723352620523 1.186001438025425 0.9491809288150207 0.8005342191703901 1.1531219177391785 1.1784415249185172 0.8158185182245539 0.9305675977914963 0.9155139037628525 1.0 9.75728770174849 -8.271817651008071 24.958524691015114 0.9549418161195523 1.020364876992365 0.11647311374671487 0.12339800947549139 1708.3487115149787 4108370.403433506 0.020472508668724472 0.024878280754434375 5.347888562374194e-09 8.271817651008071 0.06542306087281269 DEAEMS(ph)PVVER ddPTM_A549_MK2206_60min_R1 1 DEAEMSPVVER 11 0 K7EKN5;A0A590UJ23;A0A590UJ36;A6NDB9 K7EKN5 PALM3 Paralemmin-3 1 DEAEMS(1)PVVER 49.5 0.010032 1063300.0 157.67 0.0 242.2 109.77 242.67 221.5 191.45 183.9 220.26 0.0 120.65 True False 184.28084133860125 0.0 276.5476019341054 136.6636549277625 206.9735644630051 244.9389829801996 226.23398683106012 209.96838817013 170.37146168294376 0.0 90.68927522939691 2.0320025810380127 0.0 3.0493969792412954 1.5069439532080746 2.2822275725488943 2.7008594165145854 2.4946057431686963 2.315250481812967 1.8786285506416516 0.0 1.0 6.502860044889134 -5.749870611488807 24.99968133631115 1.7860509534942006 1.0160024370009844 0.11067901196338659 0.9254020282088626 372.0174861905109 803900.3777802251 0.11265409565756791 0.4289173893796164 1.7788092882973787e-06 5.749870611488807 -0.7700485164932163 DEALQNISADDLPDS(ph)ASQAAHPQDSAFSYR ddPTM_A549_MK2206_60min_R1 2 DEALQNISADDLPDSASQAAHPQDSAFSYR 30 0 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;F8W9S7;Q14C86-4 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 DEALQNISADDLPDS(0.654)AS(0.346)QAAHPQDSAFSYR;DEALQNIS(0.041)ADDLPDS(0.478)AS(0.478)QAAHPQDS(0.001)AFS(0.001)YR 98.795 1.6278e-10 6227400.0 1309.92 1405.51 1103.88 1053.17 1224.06 1207.92 887.1400000000001 1105.1 1729.87 1356.74 1856.05 True False 1531.0024715307957 1477.0444555814065 1260.4267829191597 1311.1966972785976 1044.0023955024772 1335.7412926475972 1048.3218546738399 1261.751309226811 1338.0572070347498 1050.2514917031476 1395.1415606259604 1.0973814519896306 1.0587057953593602 0.9034400655039205 0.9398305765404199 0.748312877321254 0.9574234832831501 0.7514089496434238 0.90438945038717 0.9590834685151244 0.7527920616399167 1.0 10.446195799871733 -5.666033157729732 5.0712273793298035 0.9364014937075811 1.087083387468277 0.2443942010436626 0.10034945149485908 0.20479900338690812 8.414394245180969 0.012780508128549818 0.052328795498740546 2.157579674904848e-06 5.666033157729732 0.15068189376069596 DEALS(ph)DGDDLR ddPTM_A549_MK2206_60min_R1 2 DEALSDGDDLR 11 0 Q01831-2;Q01831;E7EUB5;Q01831-3 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 DEALS(1)DGDDLR;DEALS(1)DGDDLR 56.093999999999994 0.015798 898810.0 0.0 0.0 164.45 117.71 242.61 135.5 129.02 0.0 301.08 142.37 0.0 True False 0.0 0.0 187.77148281611744 146.54895528420272 206.9223903835237 149.8385200623795 152.46126393806932 0.0 232.8858607259633 110.20851811974072 0.0 0.0 DEALS(ph)DGDDLR ddPTM_A549_PD325901_60min_R1 2 DEALSDGDDLR 11 0 Q01831-2;Q01831;E7EUB5;Q01831-3 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 DEALS(1)DGDDLR;DEALS(1)DGDDLR 70.977 0.0027548000000000004 872720.0 184.21 120.98 89.459 121.3 420.63 133.98 320.4 132.96 147.96 0.0 213.77 True False 202.91086359176538 131.17540917934696 95.53022570066807 128.7924255077122 391.0863998947233 132.8889113009274 332.5929973296072 130.3080084948978 141.74175574475998 0.0 187.4776451996798 1.082320312779947 0.6996856027268418 0.5095552891061768 0.6869748410299116 2.086042842484941 0.7088253704029047 1.7740408301766704 0.6950589141233802 0.7560461706983402 0.0 1.0 7.550574768944327 -4.957666470568454 19.887727262492763 0.9444225020702277 2.0405077006716996 0.0015420476223997337 0.5522717614439461 1631.5965095916747 547288.7000896726 0.06000454346036549 122710.03249066013 1.1023855945103931e-05 4.957666470568454 1.096085198601472 DEALS(ph)DGDDLRDFPSDLKK ddPTM_A549_MK2206_60min_R1 1 DEALSDGDDLRDFPSDLKK 19 2 Q01831-2;Q01831;E7EUB5;Q01831-3 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 DEALS(1)DGDDLRDFPSDLKK 63.184 0.00049323 1273500.0 351.58 646.07 257.79 336.93 605.35 360.51 325.07 356.76 425.07 500.06 615.89 True False 410.9181086942691 678.9522034119135 294.3484983591788 419.4778651253626 516.3038169022963 398.65892891282994 384.1310112257651 407.331822531678 328.79232369730727 387.0960986932467 462.9475153007315 0.8876127317096324 1.4665856948619003 0.6358139716290939 0.9061024225453918 1.1152534571157693 0.8611320198011224 0.8297506704971361 0.8798660951167964 0.7102151168987768 0.8361554731356283 1.0 8.85470483313631 -7.346665604541874 11.412409113901246 0.8583936157977342 1.0023395539576927 0.12401135765739102 0.19744493604206126 1.3716565759658643 179.80865528681716 0.030248369343927554 0.04836052051335124 4.501263070484096e-08 7.346665604541874 0.1439459381599585 DEAQNEGPATESEAPLKEDGLLPKPLS(ph)SGGEEEEKPR ddPTM_A549_MK2206_60min_R1 1 DEAQNEGPATESEAPLKEDGLLPKPLSSGGEEEEKPR 37 3 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 DEAQNEGPATESEAPLKEDGLLPKPLS(0.5)S(0.5)GGEEEEKPR 55.48 0.00086905 2816000.0 730.63 514.09 466.5 808.55 868.41 582.15 494.25 563.53 1028.0 690.06 949.66 True False 853.9424818115189 540.2549851440723 532.6567147079286 1006.6447862971887 740.6680393757712 643.7527266001047 584.0488273243741 643.4121032382451 795.159641378672 534.1749667325159 713.8332127173567 1.1962773188442812 0.7568364367461662 0.7461921149343255 1.410196063118418 1.0375925722988737 0.901825125437249 0.8181866813132287 0.9013479504392367 1.1139291745080466 0.7483190151647137 1.0 9.479443217398577 -8.763179230021388 24.97679023912157 1.0537998838632028 0.9658730628745104 0.0 0.208351583935974 127.97032624853223 1837102.3003703307 0.03245178205383759 0.03542465865260425 1.7251257987987136e-09 8.763179230021388 -0.08792682098869242 DEAQNEGPATESEAPLKEDGLLPKPLS(ph)SGGEEEEKPR ddPTM_A549_PD325901_60min_R1 1 DEAQNEGPATESEAPLKEDGLLPKPLSSGGEEEEKPR 37 3 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 DEAQNEGPATESEAPLKEDGLLPKPLS(0.5)S(0.5)GGEEEEKPR 185.81 2.4398999999999998e-81 10981000.0 1372.9 1973.3 1765.9 1625.4 1840.4 2197.2 1705.2 1908.8 1891.9 1810.0 2320.1 True False 1512.2757973244384 2139.596916296952 1885.7445932193496 1725.797266448767 1711.1366530353246 2179.3067316793386 1770.0923191212441 1870.7274865753684 1812.390022259472 1695.7162911034673 2034.7424083256644 0.7432271481326475 1.051532079708099 0.9267731313326677 0.8481649860872954 0.8409598414196191 1.0710479728353588 0.8699343523182407 0.9193927835389938 0.8907220957520808 0.8333813086929402 1.0 10.990630450282124 -10.830533663650082 0.9483082099614303 1.0029630899553026 0.9108194833832979 0.0 0.1006286227233948 1.0088322447328593 1.5240014554411043 0.06634279964151953 0.014370282472407053 1.4772919672004476e-11 10.830533663650082 -0.09214360657200471 DEAQNEGPATESEAPLKEDGLLPKPLSS(ph)GGEEEEKPR ddPTM_A549_PD325901_60min_R1 1 DEAQNEGPATESEAPLKEDGLLPKPLSSGGEEEEKPR 37 3 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 DEAQNEGPATESEAPLKEDGLLPKPLS(0.191)S(0.809)GGEEEEKPR 127.17 8.547399999999999e-30 10209000.0 1221.3 1214.3 1501.5 1312.9 2245.2 1269.0 1523.4 1529.7 1649.2 1448.1 1628.8 True False 1345.2854769264584 1316.6333225862206 1603.4008192529875 1393.9948511877612 2087.5048975195127 1258.665684735609 1581.3738206364671 1499.188933473565 1579.889859247487 1356.666718865708 1428.467925813906 0.9417680667628205 0.9217101054866425 1.1224618980082517 0.975867099286459 1.4613593065662314 0.8811298188711182 1.107041881766746 1.049508292333105 1.1060030335278999 0.9497355133771817 1.0 10.480252927664608 -5.750077021497344 24.574750521840095 1.06958443126754 0.9317389833425404 0.12670841918419384 0.14242095735334417 257.39752778921803 556690.953327147 0.017312003541832283 0.06582223328065266 1.777964062725192e-06 5.750077021497344 -0.13784544792499964 DEASS(ph)VTR ddPTM_A549_PD325901_60min_R1 1 DEASSVTR 8 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DEAS(0.159)S(0.841)VTR 116.52 0.0012831 10298000.0 1433.9 1496.6 1185.8 1317.9 1783.8 1167.4 997.95 1122.6 1512.7 1530.8 1202.3 True False 1579.4684724186122 1622.7237343181562 1266.2755187946677 1399.3036898319376 1658.5120417759247 1157.8930814502367 1035.9275333491935 1100.208862337337 1449.1264795559503 1434.1450267520372 1054.4247220076493 1.4979433234562893 1.5389659408103145 1.2009159993741891 1.327077846930249 1.5729070147540538 1.098127782176409 0.9824575540838641 1.043420966309016 1.3743290054853605 1.360120828750479 1.0 10.042240385898115 -7.276225885993316 24.89317688540283 1.1486629022132546 1.4155772344766997 0.45844670006942867 0.15364285858210047 652.7666356518093 1098935.0250348765 0.02644500331412427 0.04238418845345046 5.293880260613162e-08 7.276225885993316 0.2669143322634451 DEDEGIPS(ph)ENEEEK ddPTM_A549_MK2206_60min_R1 1 DEDEGIPSENEEEK 14 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 DEDEGIPS(1)ENEEEK 50.675 0.025312 746530.0 201.98 170.7 0.0 168.58 210.58 0.0 203.32 195.32 215.73 246.2 137.51 True False 236.06928606311084 179.38790088134982 0.0 209.8821075678438 179.60396095363927 0.0 240.26061218329136 223.00720814241313 166.86749945002023 190.58324900667395 103.36247191706897 2.2838974502517395 1.735522550440536 0.0 2.0305445842688337 1.7376128649258824 0.0 2.3244472362857205 2.1575258796184653 1.6143915325854763 1.8438340867039733 1.0 6.691568667433262 -5.522400497537265 24.99979274337437 1.3354047394788715 2.14680415843966 0.09479420853608156 0.7587858476042526 21.59762036190168 1128842.699808511 0.09781340420168834 0.38808262810916117 3.0033054380221378e-06 5.522400497537265 0.8113994189607885 DEDEGIPS(ph)ENEEEKK ddPTM_A549_MK2206_60min_R1 2 DEDEGIPSENEEEKK 15 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 DEDEGIPS(1)ENEEEKK;DEDEGIPS(1)ENEEEKK 87.49 1.6472e-05 10612000.0 3510.1 3293.3 3394.3999999999996 2838.5 5782.200000000001 3968.8 3402.8999999999996 3935.1 5939.1 4023.3999999999996 3366.7 True False 4102.519066294311 3460.9149031783772 3875.776961210272 3533.9326274251066 4931.6460396340235 4388.775781723779 4021.1628821489367 4492.912475738326 4593.90333279384 3114.511145627342 2530.6554738069663 1.621129035049061 1.3675962370223333 1.5315308627846467 1.396449522268976 1.948762322915158 1.7342446757960173 1.5889807695157099 1.7753947632308313 1.815301758908749 1.2307132195051658 1.0 11.30529539540471 -10.830275721861321 1.0476341265250517 0.9956210423855983 1.647907364559703 0.5583078436236866 0.1772254757747845 0.2662269432333659 0.51305335004528 0.12889054389844487 0.030914491836579225 1.4781696401423872e-11 10.830275721861321 0.6522863221741048 DEDEGIPS(ph)ENEEEKK ddPTM_A549_PD325901_60min_R1 2 DEDEGIPSENEEEKK 15 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 DEDEGIPS(1)ENEEEKK;DEDEGIPS(1)ENEEEKK 84.581 6.850000000000001e-05 11029400.0 3695.5 3912.6 3282.0 3468.2 4204.5 3552.5 2749.4 3891.8 3331.2 4483.4 3953.0 True False 4070.6644395166886 4242.328533270893 3504.7362562692715 3682.4228371463105 3909.1904247375705 3523.5696178276194 2854.0299215294076 3814.1749959419644 3191.2012485600476 4200.31735885817 3466.806060131613 1.1741829132957473 1.2236994108374895 1.0109409627996955 1.0621946463906067 1.1276057434228561 1.0163734448110004 0.8232447595932315 1.1001985486886925 0.9205018086413803 1.2115812900992537 1.0 11.75939141629589 -5.94567738929641 0.5531172471307362 0.9640042369975319 1.264768954313975 0.13271747489451247 0.10962244890321034 1.3042448133815254 0.41275460920685325 0.015144648871746753 0.2173612535245478 1.1332418664443777e-06 5.94567738929641 0.30076471731644316 DEDGES(ph)GGQR ddPTM_A549_MK2206_60min_R1 1 DEDGESGGQR 10 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 DEDGES(1)GGQR 60.434 0.008011399999999998 1948300.0 349.72 356.74 109.2 199.27 0.0 0.0 0.0 0.0 0.0 328.9 324.9 True False 408.7441861669035 374.8965422402618 124.6862020280938 248.09115894557019 0.0 0.0 0.0 0.0 0.0 254.60126156902942 244.21836321617118 1.6736832594570352 1.535087441022689 0.5105521156806998 1.015857921895787 0.0 0.0 0.0 0.0 0.0 1.0425148142675404 1.0 7.932027873002866 -5.733976023298226 1.3908583855222172 0.38270452445431047 1.8591894945228928 0.5460955459591064 0.4242115609606951 0.4116143456012009 1.1990828949154424 0.0712055540353136 0.6651922999698363 1.8451172823333425e-06 5.733976023298226 1.4764849700685825 DEDGES(ph)GGQRS(ph)EAEEGEVR ddPTM_A549_PD325901_60min_R1 1 DEDGESGGQRSEAEEGEVR 19 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 2 DEDGES(1)GGQRS(1)EAEEGEVR 48.867 0.005249 17886000.0 203.32 135.94 258.43 0.0 317.17 0.0 203.19 242.73 168.36 137.97 287.82 True False 223.96089672372688 147.3961408814715 275.9686138658341 0.0 294.89307337709937 0.0 210.92250663983432 237.88855973199875 161.284414687671 129.25855065389248 252.41996464130534 0.8872550831784662 0.583932182586765 1.093291547909025 0.0 1.168263666450272 0.0 0.8356015220094025 0.9424316340034511 0.638952687109595 0.5120773661369136 1.0 7.979682211624194 -11.017139131555478 0.5306306931162958 1.09748610738267 0.6647079810833548 0.0 0.3948178147218325 3.2290748544395913 1.0357698222880514 0.7401117873306976 0.07497844120821878 9.613042634555685e-12 11.017139131555478 -0.4327781262993152 DEDGES(ph)GGQRS(ph)EAEEGEVRT(ph)PTK ddPTM_A549_PD325901_60min_R1 1 DEDGESGGQRSEAEEGEVRTPTK 23 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 3 DEDGES(0.999)GGQRS(0.999)EAEEGEVRT(0.867)PT(0.135)K 41.434 0.032498 8581400.0 824.89 1361.5 1213.0 1113.0 1455.2 1211.3 1074.4 1268.2 1552.9 1553.4 1818.9 True False 908.6322255480777 1476.238383184666 1295.3214743615545 1181.747482193601 1352.9917721674658 1201.4355744052352 1115.2868799342386 1242.904756116346 1487.6370133552175 1455.3180588950984 1595.1868309570932 0.569608655183612 0.9254329051218034 0.8120186609015427 0.7408207360165872 0.8481713526657481 0.7531629217904138 0.6991575270622562 0.7791593636531077 0.9325785447104356 0.9123182505349074 1.0 10.63950968941096 -8.837588184822756 3.035917396383764 0.972230151173542 0.7709916670880519 0.4640554728358903 0.08692085720076462 0.13599127773050187 2.4167848189068466 0.014640643986200075 0.01553888749954706 1.4534892202101772e-09 8.837588184822756 -0.20123848408549005 DEDGES(ph)GGQRSEAEEGEVR ddPTM_A549_PD325901_60min_R1 4 DEDGESGGQRSEAEEGEVR 19 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 DEDGES(0.998)GGQRS(0.002)EAEEGEVR;DEDGES(0.906)GGQRS(0.094)EAEEGEVR;DEDGES(1)GGQRSEAEEGEVR;DEDGES(0.92)GGQRS(0.08)EAEEGEVR 112.86 4.3536e-11 21488800.0 3400.54 3198.33 3212.16 2808.59 3353.79 3416.45 3120.47 2985.6 2934.27 3497.3599999999997 3095.73 True False 3745.760317454762 3467.8644936401124 3430.1564938872325 2982.0702255293113 3118.231360347393 3388.6275639203864 3239.2211934367015 2926.049865842109 2810.9528360987897 3276.536092736806 2714.974835449336 1.3796666799804163 1.2773099950542162 1.2634211002989029 1.0983785877469359 1.1485304834625907 1.2481248517206087 1.1930943709467574 1.0777447465209524 1.035351340791919 1.2068384759796604 1.0 11.4067231107062 -2.000000000000462 0.15026542069182472 0.9458905679459789 2.4609431592839486 0.40215304617468683 0.08502645922295486 20.35645081982474 0.19076665176796276 0.10659519460554885 6.7844355366998395 0.009999999999989365 2.000000000000462 1.5150525913379695 DEDGESGGQRS(ph)EAEEGEVR ddPTM_A549_PD325901_60min_R1 2 DEDGESGGQRSEAEEGEVR 19 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 DEDGES(0.31)GGQRS(0.69)EAEEGEVR;DEDGES(0.089)GGQRS(0.911)EAEEGEVR 63.336999999999996 0.0019711 10604200.0 641.05 362.57 965.99 696.09 396.74 494.05 482.24 768.5999999999999 608.3199999999999 604.72 422.44 True False 706.1289240839322 393.1250463395256 1031.5478903697594 739.0858983649083 368.8743510786972 490.0266206017555 500.59190709185316 753.2696700449646 582.7544258897836 566.5378759978393 370.48255806779616 1.9059707635540422 1.0611162058203722 2.784335909764994 1.9949276484688379 0.9956591560005245 1.3226712295375682 1.3511888648756516 2.0332122353439392 1.572960489500677 1.5291890634542804 1.0 8.533261813327648 -12.464116861624413 0.19885884574344884 1.351237227232294e-11 1.821903369476554 0.05752461574587853 0.5069798509803254 21.217609213765076 0.6071502955845539 9.97022864293354 0.5248352918674205 3.434655144466753e-13 12.464116861624413 1.8219033694630418 DEDGESGGQRS(ph)EAEEGEVRT(ph)PTK ddPTM_A549_MK2206_60min_R1 2 DEDGESGGQRSEAEEGEVRTPTK 23 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 2 DEDGES(0.426)GGQRS(0.589)EAEEGEVRT(0.807)PT(0.179)K;DEDGES(0.106)GGQRS(0.894)EAEEGEVRT(0.944)PT(0.055)K 57.543 0.0015578 23033000.0 1066.04 1345.76 1060.32 949.18 1740.32 1252.24 946.58 1042.4099999999999 1264.17 1453.8400000000001 1345.8600000000001 True False 1245.961489824333 1414.25343579429 1210.6893199123483 1181.7291426103093 1484.321233387964 1384.7512056303626 1118.5613332700182 1190.174809746738 977.8375134646642 1125.4165342642684 1011.6458181536361 1.2316182872167145 1.397972897644609 1.1967521618603518 1.1681253670055136 1.4672340919641342 1.3688102899072765 1.1056847299695407 1.176473809696497 0.9665808882097928 1.1124610155738857 1.0 9.98248856893297 -8.316013319772859 1.4755881892699239 0.9842165493616257 1.3001039196453281 0.5305979422743391 0.10384761545871893 0.1621570397569928 0.6855939067847577 0.017343682397234484 0.02205551197154891 4.83043986896774e-09 8.316013319772859 0.3158873702837024 DEDMLYS(ph)PELAQR ddPTM_A549_MK2206_60min_R1 3 DEDMLYSPELAQR 13 0 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 DEDMLY(0.012)S(0.988)PELAQR;DEDMLY(0.055)S(0.945)PELAQR;DEDMLYS(1)PELAQR 103.75 0.00011978 18698000.0 1898.6399999999999 1956.77 1436.8799999999999 1679.29 3015.98 1926.0700000000002 1791.64 1964.4900000000002 3098.6 2722.2200000000003 2429.46 True False 2219.084014708707 2056.3612349595724 1640.6511902026332 2090.716125386192 2572.333337244548 2129.8854489782075 2117.157796636201 2242.9624734983076 2396.7720474474245 2107.2686113360996 1826.1580323150492 1.2151653774977729 1.1260587520745349 0.8984168736605747 1.1448714122160382 1.408603905973877 1.1663204450482954 1.1593508114696114 1.2282411674168576 1.312466941543388 1.153935516010453 1.0 10.834595903528536 -5.236725060736919 20.369132216507495 1.1566531289040942 1.2151661747300289 0.014274661049176296 0.12978692391649738 2736.9860877205597 2255314.148999157 0.020779797790523625 1.202765529983401 5.797956320952641e-06 5.236725060736919 0.05851304582593464 DEDMLYS(ph)PELAQR ddPTM_A549_PD325901_60min_R1 3 DEDMLYSPELAQR 13 0 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 DEDMLY(0.31)S(0.69)PELAQR;DEDMLYS(1)PELAQR;DEDMLYS(1)PELAQR 158.58 1.8135e-18 28452300.0 2877.2400000000002 3006.59 2553.35 2750.6600000000003 3135.1099999999997 2960.62 2864.08 3226.47 2920.77 3392.1400000000003 3640.8199999999997 True False 3169.3352866878627 3259.9658909285226 2726.6356855408717 2920.5620209978874 2914.910689142349 2936.5096923104334 2973.074131684712 3162.1155247332504 2798.020194151277 3177.9597014937667 3193.022221059543 0.992581656896888 1.020965613526725 0.8539357062902275 0.9146701209078197 0.9129002203357959 0.9196646590627262 0.931116016692848 0.9903205508178278 0.8762921146295085 0.995282676247465 1.0 11.640706877689372 -11.122319871858872 1.4837033465557448 0.9999170406990693 0.9267644153706557 0.1878514169403449 0.0481686447776484 0.5075156848558522 2.0032119875655354 0.03623899393891012 0.007862126914477567 7.545362827062979e-12 11.122319871858872 -0.0731526253284136 DEELSSEES(ph)PRR ddPTM_A549_MK2206_60min_R1 2 DEELSSEESPRR 12 1 H0YMN5;Q9ULG1 H0YMN5 INO80 DNA helicase INO80 1 DEELS(0.029)S(0.029)EES(0.942)PRR;DEELS(0.002)S(0.013)EES(0.985)PRR 58.676 0.0048573 8440200.0 569.74 534.41 597.4200000000001 301.28 582.66 764.06 548.44 747.51 941.75 801.09 660.02 True False 665.8981831943593 561.609186350335 682.1431393372144 375.09361352497314 496.9514858450348 844.9123220580193 648.0844488776524 853.4718316533649 728.4451286657234 620.123212618832 496.1188183746918 1.342215127770949 1.1320054098939296 1.3749592115290987 0.7560560084251534 1.0016783630039894 1.7030442925466749 1.3063089422828327 1.7202972353465207 1.4682876393444282 1.2499489832907051 1.0 8.954541871175723 DEELSSEES(ph)PRR ddPTM_A549_PD325901_60min_R1 2 DEELSSEESPRR 12 1 H0YMN5;Q9ULG1 H0YMN5 INO80 DNA helicase INO80 1 DEELSS(0.053)EES(0.947)PRR;DEELS(0.003)S(0.02)EES(0.978)PRR 109.83 3.847e-05 13045300.0 738.7099999999999 807.96 581.99 801.76 988.95 1031.6 733.5 836.27 926.6400000000001 1022.6300000000001 1237.47 True False 813.7032953904404 876.0496247358665 621.4873411901746 851.2828942709265 919.4895636922865 1023.1989916258902 761.4137438866009 819.5899388088765 887.6965432774025 958.0609672768721 1085.269034968647 0.7497710421766046 0.807218852200252 0.5726573975347312 0.7843980311255445 0.8472457372920902 0.9428067683286017 0.7015898540849806 0.7551951750217899 0.8179506782878475 0.8827866053550032 1.0 10.083837011481435 -14.999984535976377 0.1584357510890204 1.885649633578964 0.7110375621054442 0.29549466510473577 0.09320914532179447 35.42551019056881 0.3631867388083227 9.672346352767764 0.14385485699281023 1.0000356078642159e-15 14.999984535976377 -1.1746120714735198 DEEPSGWEEPS(ph)PQSISR ddPTM_A549_MK2206_60min_R1 2 DEEPSGWEEPSPQSISR 17 0 H0Y720;Q9UPQ9-1;Q9UPQ9 H0Y720 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 DEEPSGWEEPS(0.997)PQS(0.002)ISR;DEEPS(0.002)GWEEPS(0.808)PQS(0.096)IS(0.094)R 88.73 7.0352e-06 2378400.0 407.09 697.75 558.36 166.38 825.39 914.4100000000001 394.73 635.54 868.61 1039.5900000000001 1044.4499999999998 True False 475.7968396050688 733.2624946687861 637.5438439963964 207.143107469082 703.976224387521 1011.1722592637673 466.4473315321196 725.629741259621 671.8712218851441 804.7458969733879 785.0842396464452 0.606045587947784 0.9339921216594584 0.8120706184135194 0.26384825603220213 0.8966887740665251 1.287979312537389 0.5941366645472077 0.9242699122152817 0.8557950700777213 1.0250440097177305 1.0 9.616703653460178 -6.96712882028312 24.998689323870856 0.9305310481351994 0.6721542928413533 0.2860546397848278 0.21732538524880107 205.53807199905302 156311.8573770945 0.0299319646948024 0.05656586016087868 1.078626732875965e-07 6.96712882028312 -0.25837675529384607 DEEPSGWEEPS(ph)PQSISR ddPTM_A549_PD325901_60min_R1 2 DEEPSGWEEPSPQSISR 17 0 H0Y720;Q9UPQ9-1;Q9UPQ9 H0Y720 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 DEEPSGWEEPS(0.805)PQS(0.085)IS(0.11)R;DEEPS(0.001)GWEEPS(0.957)PQS(0.021)IS(0.021)R 77.146 0.00040717 2875300.0 785.13 687.61 620.28 515.66 650.11 496.47 327.89 553.79 360.62 585.44 664.24 True False 864.8358196178425 745.5573078675048 662.3759308466488 547.5111470511696 604.4485163577455 492.4269129241042 340.3680333782927 542.7442240101497 345.4643954898308 548.4752184881845 582.5426909642856 1.484587881767559 1.2798329108436335 1.1370427285770504 0.9398644177388473 1.0376038112454884 0.8453061390384757 0.5842799826650986 0.9316814585927473 0.5930284610008272 0.9415193547107954 1.0 9.186219969645734 -5.7649731090685 0.7378768083062947 0.8008411806093093 1.638912902590568 0.7174482350906715 0.13435925158193618 0.7384723195392439 0.42072629359840835 0.027165499030915603 0.44144741802663345 1.718014761032731e-06 5.7649731090685 0.8380717219812587 DEFEGLFK ddPTM_A549_MK2206_60min_R1 2 DEFEGLFK 8 0 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 ; 128.1 0.0029484999999999997 2586600.0 2016.02 2056.3 2114.4 1749.5900000000001 2562.1000000000004 2015.42 2696.8 2144.93 2675.2 2964.2 3024.0 False True 2356.274889043236 2160.9568868325687 2414.2537139945193 2178.239628542079 2185.2184839933484 2228.6904066724783 3186.7736520553826 2448.9803960726317 2069.2714714165577 2294.585161273691 2273.057341845803 1.036610403822834 0.9506829621279133 1.0621173824123855 0.958286264249397 0.9613565147542092 0.9804813832204967 1.4019767972362764 1.0773949037660322 0.910347237318807 1.00947086509063 1.0 11.150418363781817 -8.752803568907744 24.99376870520607 0.9576639720816035 1.0533873764780186 0.07590696721792844 0.12155851121536745 323.70846762632954 936876.3256915826 0.021482596340424067 0.024173475163554493 1.7668367790352946e-09 8.752803568907744 0.09572340439641513 DEFEGLFK ddPTM_A549_PD325901_60min_R1 2 DEFEGLFK 8 0 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 ; 130.27 0.0029484999999999997 3547400.0 3687.6000000000004 4017.9 3527.0 3706.2999999999997 4234.299999999999 3650.6 3476.9 4732.700000000001 4251.4 4319.9 4497.6 False True 4061.96243733236 4356.502533821279 3766.3634295739544 3935.229733381979 3936.897375541986 3620.8707239525734 3609.2153321326823 4638.302585768676 4072.7284426417473 4047.140776761253 3944.42371263545 1.0297987065437189 1.1044712361569544 0.9548577191413025 0.9976691197692531 0.9980919045108276 0.9179720506074394 0.9150171470095946 1.1759138783469116 1.032528130686186 1.0260410827053803 1.0 11.945598819969256 DEGKKT(ph)SASDVTNIYPGDAGK ddPTM_A549_MK2206_60min_R1 2 DEGKKTSASDVTNIYPGDAGK 21 2 Q15042-4;Q15042;Q15042-3 Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit 1 DEGKKT(0.492)S(0.492)AS(0.017)DVTNIYPGDAGK;DEGKKT(0.45)S(0.45)AS(0.093)DVT(0.007)NIYPGDAGK 129.78 6.7178e-18 29946000.0 4720.5 5849.9 5303.4 4504.799999999999 6495.200000000001 4795.2 4290.0 4622.8 7100.9 7038.700000000001 6544.799999999999 True False 5517.204994855505 6147.634923056869 6055.501866628136 5608.4762022281575 5539.7646841394135 5302.624881203852 5069.43746934055 5278.0960567312495 5492.55748780721 5448.652781410542 4919.54553270913 1.1214867223349494 1.2496347238138978 1.2309067629044688 1.1400394944895738 1.1260724486248908 1.077868849052763 1.0304686552110995 1.0728828550601237 1.1164766036391434 1.1075520584540741 1.0 12.264309330309802 -6.872380502034633 1.428713132609078 1.0563555520840349 1.2036078830499757 0.6123357287458648 0.04439581053911891 0.21009444637975166 0.8577279732014916 0.007983937630836081 0.019601372620781203 1.341589028525355e-07 6.872380502034633 0.14725233096594081 DEGKKT(ph)SASDVTNIYPGDAGK ddPTM_A549_PD325901_60min_R1 1 DEGKKTSASDVTNIYPGDAGK 21 2 Q15042-4;Q15042;Q15042-3 Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit 1 DEGKKT(0.461)S(0.461)AS(0.077)DVT(0.001)NIYPGDAGK 84.93299999999999 1.6389000000000002e-05 5544100.0 1245.9 1256.5 1210.4 1972.9 1580.5 1784.4 1507.0 1836.0 2563.2 3068.4 3154.9 True False 1372.3828508168965 1362.389664687133 1292.5450227264844 2094.761552219006 1469.4911324289988 1769.8684380159334 1564.3497096620417 1799.3795396858625 2455.4776177681047 2874.6607003435784 2766.8673005588703 0.4960060247702134 0.4923942917002013 0.4671510709839274 0.7570878270150115 0.5311028585043385 0.6396650962113158 0.5653866050410383 0.6503309859935863 0.8874576736195954 1.0389586445880274 1.0 11.434037738361875 -8.764456928916498 1.3889047582013023 0.9637754499135652 0.5600698428423683 0.8287166575931844 0.08203698133371197 0.10759855955280016 0.4081870677065346 0.01623731760478575 0.017324699343525013 1.7200579192395828e-09 8.764456928916498 -0.40370560707119696 down DEGLCS(ph)ANVTR ddPTM_A549_MK2206_60min_R1 2 DEGLCSANVTR 11 0 A0A3B3IS67;P48307-2;P48307 A0A3B3IS67 TFPI2 Tissue factor pathway inhibitor 2 1 DEGLCS(1)ANVTR;DEGLCS(0.998)ANVT(0.002)R 98.902 0.00027488 31702000.0 1383.38 1626.0700000000002 1120.01 1790.99 1588.0900000000001 1517.38 1509.97 1422.98 1626.63 1834.03 2023.15 True False 1616.8607236062305 1708.8300174934764 1278.844259464151 2229.782630400595 1354.4840647301014 1677.9481444446747 1784.3120036317368 1624.691772693482 1258.2009021943463 1419.7213492108458 1520.746018900575 1.0632023385306257 1.123678770981677 0.8409321764252868 1.4662426221655465 0.890670794396902 1.1033717159803904 1.1733136115139773 1.068351817135155 0.8273576827141483 0.9335690059785491 1.0 10.570563512104018 -8.643668638915354 6.979920833501999 0.9187287296263446 1.0944752744627633 0.1935778157617647 0.15592910508487184 0.2470223439445275 14.261400132767413 0.02524569477849677 0.028614969763618745 2.271597390338905e-09 8.643668638915354 0.17574654483641872 DEGLCS(ph)ANVTR ddPTM_A549_PD325901_60min_R1 2 DEGLCSANVTR 11 0 A0A3B3IS67;P48307-2;P48307 A0A3B3IS67 TFPI2 Tissue factor pathway inhibitor 2 1 DEGLCS(1)ANVTR;DEGLCS(1)ANVTR 142.83 2.8108e-11 33547000.0 2867.0 2862.6000000000004 2896.8 2519.5 2803.3999999999996 2483.6000000000004 2425.1 2944.7 1822.92 2253.1000000000004 2389.6 True False 3158.0557294261525 3103.841348295573 3093.394267873497 2675.1237928003384 2606.4988552049713 2463.3743850349556 2517.388507565639 2885.9656484275406 1746.3090117750598 2110.83888148355 2095.6943489224627 1.5069257265735918 1.481056314290997 1.4760712932513365 1.2764856641312219 1.2437399836217278 1.1754454490472535 1.2012193041699986 1.3770928236321338 0.8332842108740498 1.007226498734834 1.0 11.033212603899702 -7.432090357847292 0.476180940490078 0.9189427436740362 1.5310347821969665 0.6626289786190884 0.12230911580716074 0.4542457051775458 0.19731936816667603 0.03902675684217979 0.11222481828422799 3.697512425786101e-08 7.432090357847292 0.6120920385229304 DEGSQDQT(ph)GSLSR ddPTM_A549_PD325901_60min_R1 1 DEGSQDQTGSLSR 13 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 DEGS(0.004)QDQT(0.484)GS(0.484)LS(0.028)R 46.481 0.03877 737580.0 315.02 372.68 204.23 116.42 111.05 440.58 239.11 305.54 342.43 322.88 449.86 True False 347.0005984945328 404.08705152057377 218.09027593475716 123.61099899099638 103.25023110170224 436.99206255383325 248.20946189601256 299.4457650085069 328.03885793240175 302.49330169695446 394.530071897497 0.8795288957965343 1.024223703853834 0.5527849243173009 0.31331198252261944 0.2617043375302649 1.1076267531448611 0.6291268513506365 0.7589935123787117 0.8314673108559127 0.7667179848727611 1.0 8.623991459402346 -9.120051942139874 0.6411495796576947 0.9743294949676046 0.6609174295485664 0.07594869815589855 0.25442782302747585 0.8151160650853253 0.7440074816504411 0.09044729413241567 0.07062704244854486 7.584868536685142e-10 9.120051942139874 -0.3134120654190382 DEGSYS(ph)LEEPK ddPTM_A549_MK2206_60min_R1 2 DEGSYSLEEPK 11 0 P18827 P18827 SDC1 Syndecan-1 1 DEGSYS(1)LEEPK;DEGSYS(1)LEEPK 173.72 3.1378e-15 11281000.0 5663.5 5427.2 5676.8 4578.7 6577.9 5182.3 4864.9 5688.6 7829.4 7504.1 7608.9 True False 6619.360340719021 5703.42129855455 6481.855601401861 5700.481705545655 5610.29962369144 5730.687546267667 5748.789357714412 6494.976470606856 6056.053400982656 5808.918598176208 5719.400135043166 1.157352202053802 0.9972062041278222 1.1333103906626636 0.9966922353654544 0.9809244835514724 1.0019735306077542 1.0051385148752185 1.1356044895008621 1.0588616389814713 1.015651722386856 1.0 12.481648126144657 -3.5713595006176297 0.0057777314532312905 5.422422662385107e-08 2.1499102715057834 0.09037245222950452 0.06022363791056311 48529.67966408815 27.61915209143438 4804.5084286155825 5493.6327464315 0.00026831224889575415 3.5713595006176297 2.149910217281557 DEGSYS(ph)LEEPK ddPTM_A549_PD325901_60min_R1 2 DEGSYSLEEPK 11 0 P18827 P18827 SDC1 Syndecan-1 1 DEGS(0.018)YS(0.982)LEEPK;DEGS(0.001)YS(0.999)LEEPK 166.7 2.8561000000000003e-14 22449900.0 10093.9 11053.6 10546.9 10666.5 11858.6 8996.2 10434.900000000001 10993.1 11696.2 11628.0 11689.0 True False 11118.625297263565 11985.125664612568 11262.676057661907 11325.345479620873 11025.692845949086 8922.937929880605 10832.005829696382 10773.833996579886 11204.649388631127 10893.8060955531 10251.327102676043 1.0846035041025195 1.1691291814777744 1.0986554174748613 1.104768715912349 1.0755380972158133 0.8704178337604045 1.0566442491985995 1.0509696831122914 1.0929950119049685 1.062672762896166 1.0 13.323523067866997 -7.001965742478447 22.636085194487507 1.033231518330285 1.1137227051992686 0.34822007354235873 0.058105619167256733 24.193525902251103 278623.0405675982 0.009059921560828622 0.016901293667221193 9.954839388822365e-08 7.001965742478447 0.08049118686898371 DEILPTT(ph)PISEQK ddPTM_A549_MK2206_60min_R1 7 DEILPTTPISEQK 13 0 P23396;P23396-2;E9PL09;E9PPU1;H0YEU2;E9PSF4 P23396 RPS3 40S ribosomal protein S3 1 DEILPT(0.127)T(0.869)PIS(0.005)EQK;DEILPT(0.068)T(0.93)PIS(0.002)EQK;DEILPT(0.036)T(0.959)PIS(0.005)EQK;DEILPT(0.029)T(0.971)PISEQK;DEILPT(0.007)T(0.99)PIS(0.003)EQK;DEILPT(0.035)T(0.964)PIS(0.002)EQK;DEILPT(0.102)T(0.843)PIS(0.054)EQK 212.83 1.9276e-37 1459202700.0 35130.7 39167.149999999994 35634.55 33216.39 49455.22 42115.28 39028.67 40606.04 55093.19 53589.57 55919.299999999996 True False 41059.90329684782 41160.59063857621 40688.065022712544 41354.407041140395 42180.42265093379 46571.89097573968 46119.67414371267 46362.07052078208 42614.670430746126 41483.648917427236 42032.99451583271 0.976849348227656 0.9792447840724768 0.9680030055290596 0.9838558379551876 1.0035074383064844 1.1079841327554545 1.097225517119429 1.1029923291170398 1.0138385552020166 0.9869306099949993 1.0 15.359234620223232 -6.91311063512754 4.3562173990713635 1.029496789510388 0.9768977113642461 0.3543414345580914 0.04191345183054132 0.2806829670814178 9.879461212329767 0.007212778521665497 0.013949152005468078 1.221488450258326e-07 6.91311063512754 -0.05259907814614184 DEILPTT(ph)PISEQK ddPTM_A549_PD325901_60min_R1 4 DEILPTTPISEQK 13 0 P23396;P23396-2;E9PL09;E9PPU1;H0YEU2;E9PSF4 P23396 RPS3 40S ribosomal protein S3 1 DEILPT(0.078)T(0.922)PIS(0.001)EQK;DEILPT(0.11)T(0.889)PIS(0.001)EQK;DEILPT(0.008)T(0.99)PIS(0.002)EQK;DEILPT(0.026)T(0.971)PIS(0.003)EQK 211.83 2.158e-37 1679373500.0 19850.949999999997 19872.64 21282.890000000003 20086.170000000002 23061.95 18588.5 20743.260000000002 21864.359999999997 21279.329999999998 22432.43 23961.51 True False 21866.203830502975 21547.377115836152 22727.274899814358 21326.84710189813 21442.15819140839 18437.121418997533 21532.656110447417 21428.258187541385 20385.03376096339 21016.042541457544 21014.396174526737 1.0405344816430548 1.0253626579076056 1.081509776015546 1.0148684228077007 1.0203556653890526 0.877356706606049 1.024662137879979 1.019694213889254 0.9700508923341681 1.0000783447174562 1.0 14.359090382385695 -6.755240223119107 2.8096245060036305 0.9841411196689835 1.0454253885954408 0.3112658078993479 0.04034418463259986 0.2357050530599114 3.8116325307662224 0.0056520352332897535 0.012188524402945168 1.7569515152095078e-07 6.755240223119107 0.06128426892645722 DEILPTTPISEQK ddPTM_A549_MK2206_60min_R1 1 DEILPTTPISEQK 13 0 P23396;P23396-2;E9PL09;E9PPU1;H0YEU2;E9PSF4 P23396 RPS3 40S ribosomal protein S3 0 169.52 3.4909e-21 2997600.0 2176.5 2699.2 2414.3 2174.8 3151.4 2546.1 2544.8 2659.3 3685.5 3585.5 4154.4 False True 2543.8399896839323 2836.577750784647 2756.684043557024 2707.626097630483 2687.8332346343373 2815.5266120356036 3007.1572195752524 3036.2639187646914 2850.7401345341373 2775.533059762102 3122.7478243929263 0.8146158872685995 0.9083595315084683 0.8827751065979634 0.8670652418617425 0.8607269577257209 0.901618308735177 0.9629843294054187 0.9723051906552692 0.9128947628322603 0.8888111419312815 1.0 11.608600354761178 -7.61306555608269 3.271678270670238 0.9593987577434696 0.8703543942125003 0.5270484124120729 0.03549320693008485 0.13602639837560992 2.91804809416841 0.00564106284210049 0.008634051798007086 2.4374428623548745e-08 7.61306555608269 -0.08904436353096934 DEKKEES(ph)EES(ph)DDDMGFGLFD ddPTM_A549_PD325901_60min_R1 2 DEKKEESEESDDDMGFGLFD 20 2 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 2 DEKKEES(1)EES(1)DDDMGFGLFD;DEKKEES(1)EES(1)DDDMGFGLFD 77.169 6.9706e-05 212542000.0 10154.2 13163.1 14132.8 12608.599999999999 11728.3 10641.2 15520.9 16987.1 9819.6 13534.400000000001 12397.8 True False 11185.046908873046 14272.400632903466 15091.93679543032 13387.404585791754 10904.544668438484 10554.541595278612 16111.556342862363 16648.278964377845 9406.91636057884 12679.835674204845 10872.94919612944 1.0287040532530682 1.3126521954120933 1.3880260565185716 1.231257899242039 1.0029058787766885 0.9707156177126096 1.4818018600323972 1.5311649731890875 0.8651669561674693 1.1661818192545792 1.0 13.408455691905496 -8.792900318719548 24.999948094116334 0.9363287845680587 1.2409683395613034 0.20066937934683693 0.19206790310499422 157.53660347075552 125183.3430563884 0.03282044910588291 0.034941634502632365 1.6110153604513264e-09 8.792900318719548 0.3046395549932447 DEKKEESEES(ph)DDDMGFGLFD ddPTM_A549_MK2206_60min_R1 1 DEKKEESEESDDDMGFGLFD 20 2 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 DEKKEES(0.045)EES(0.955)DDDMGFGLFD 49.25 0.0075649 5743500.0 1082.0 1031.0 1279.0 1183.4 1649.6 1235.4 1112.8 1585.4 2199.8 1672.8 1621.6 True False 1264.615147639796 1083.4734962429511 1460.3814321788648 1473.333053124845 1406.946025211906 1366.12920800785 1314.9813556834881 1810.1353050838716 1701.548812358757 1294.9133181899442 1218.9119661167842 1.0374950634610745 0.8888857656346474 1.1981024657845925 1.2087280247306103 1.1542638552431 1.1207775836019325 1.0788156915652918 1.4850418696360899 1.3959570991657089 1.0623517974930425 1.0 10.251378218140282 -5.773174596313521 24.346143106772846 1.1985340794247898 0.9631904349861544 0.28069277682074434 0.13899276209089198 156.60555430861737 324901.120068612 0.023571577455719233 0.07420681467772759 1.6858751287771818e-06 5.773174596313521 -0.23534364443863542 DEKKEESEES(ph)DDDMGFGLFD ddPTM_A549_PD325901_60min_R1 3 DEKKEESEESDDDMGFGLFD 20 2 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 DEKKEES(0.002)EES(0.998)DDDMGFGLFD;DEKKEES(0.032)EES(0.968)DDDMGFGLFD;DEKKEES(0.182)EES(0.818)DDDMGFGLFD 94.08 1.1945e-06 70503000.0 5901.14 6805.4 5785.6900000000005 6159.2699999999995 7085.42 6293.02 6747.080000000001 7050.48 6761.02 6789.98 7397.2 True False 6500.219388610336 7378.914941553377 6178.3417155803045 6539.714119182907 6587.764542572025 6241.771731564131 7003.843821543843 6909.8526454054345 6476.87784148038 6361.259504014763 6487.391294714282 1.001977388647191 1.1374240594313278 0.9523615017047329 1.008065310398535 1.0154720508287398 0.962138931969423 1.07960865983995 1.0651203745079105 0.9983794020190415 0.9805573943408828 1.0 12.663422743968358 -2.000000000000029 0.11784402109690482 0.9886569673329149 1.1493065629964576 0.040991133796640655 0.05129391605473387 206.02584200852579 1.6152876969557255 0.1896435393235843 5.4550041489748775 0.009999999999999336 2.000000000000029 0.16064959566354275 DEKNDNGAS(ph)GQTSESIKKSEEK ddPTM_A549_PD325901_60min_R1 1 DEKNDNGASGQTSESIKKSEEK 22 3 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 1 DEKNDNGAS(0.258)GQT(0.227)S(0.2)ES(0.157)IKKS(0.157)EEK 46.956 0.0024939 13932000.0 1979.0 1805.7 2089.6 2277.3 2581.3 2065.2 2173.1 2360.8 2204.0 2643.2 2901.4 True False 2179.9066231371994 1957.8726761047017 2231.412821785577 2417.9636488764486 2399.998393001567 2048.381695914877 2255.798509665949 2313.711991988228 2111.3735446164583 2476.3079009086655 2544.5461934899695 0.8566976023914704 0.7694388418311179 0.8769394037704952 0.9502533909828901 0.9431930924035817 0.8050086499335355 0.8865229153383972 0.9092827624460843 0.829764281748254 0.973182529460111 1.0 11.313192666786387 -10.883519456330403 1.0184319987450876 1.0036005293680348 0.8681510692962499 0.421617629640028 0.0525501510626273 0.4296705167465051 0.7557144390438589 0.04373215507975829 0.00942955625403053 1.3076169565561754e-11 10.883519456330403 -0.13544946007178493 DEKPPLCEKPPPS(ph)PDITGR ddPTM_A549_PD325901_60min_R1 2 DEKPPLCEKPPPSPDITGR 19 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 DEKPPLCEKPPPS(0.929)PDIT(0.071)GR;DEKPPLCEKPPPS(0.999)PDIT(0.001)GR 95.35700000000001 5.2752e-07 14973200.0 4823.700000000001 5390.1 5193.9 4805.6 5311.6 4681.2 4573.3 5238.0 3931.5 5948.0 5769.0 True False 5313.398472979748 5844.342643557596 5546.389287457941 5102.430997690534 4938.531540025231 4643.077859246912 4747.339434105784 5133.523980868495 3766.2727271595286 5572.442264907972 5059.449572704089 1.0501929896970852 1.1551340831793309 1.0962436145980994 1.0084952768811712 0.9761005558131827 0.9177041479564265 0.9383114439400383 1.0146408037277492 0.7444036496536509 1.1013929845197976 1.0 12.304764724537328 -6.771829090385263 0.9178129497347993 0.8900563785824599 1.1177321719895028 0.17474745894495491 0.09602014309288011 0.43668251634123034 0.6868278489373583 0.016567139795269394 0.05826087955187049 1.6911063084240406e-07 6.771829090385263 0.22767579340704291 DELHIVEAEAMNYEGS(ph)PIK ddPTM_A549_MK2206_60min_R1 6 DELHIVEAEAMNYEGSPIK 19 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.351)EGS(0.649)PIK;DELHIVEAEAMNY(0.305)EGS(0.695)PIK;DELHIVEAEAMNY(0.023)EGS(0.977)PIK;DELHIVEAEAMNY(0.221)EGS(0.779)PIK;DELHIVEAEAMNY(0.003)EGS(0.997)PIK;DELHIVEAEAMNYEGS(1)PIK 164.58 1.4850999999999998e-27 142312000.0 9281.81 10160.529999999999 9334.8 9726.599999999999 14615.500000000002 13866.999999999998 12903.699999999999 13707.9 16762.7 14092.300000000001 14597.699999999999 True False 10848.352609532834 10677.657577867487 10658.615006335622 12109.617436643664 12465.579311035779 15334.39673583037 15248.135261801774 15651.03680368311 12965.975214531385 10908.839642472592 10972.688213975693 0.9886686286880462 0.9731122738243458 0.9713768220225156 1.1036144653431315 1.136055182462819 1.3975059198619402 1.389644448511763 1.42636302959458 1.18165894826182 0.9941811368136956 1.0 13.421629396435593 -6.419432470589339 2.708789448427366 1.1636632703660128 0.975602695857195 0.30570375157947627 0.145132307042566 0.3836784491786975 5.435403074964498 0.025310997772925562 0.06560032654849116 3.806865467934828e-07 6.419432470589339 -0.18806057450881786 DELHIVEAEAMNYEGS(ph)PIK ddPTM_A549_PD325901_60min_R1 4 DELHIVEAEAMNYEGSPIK 19 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.002)EGS(0.998)PIK;DELHIVEAEAMNY(0.001)EGS(0.999)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK 230.55 1.2930999999999998e-75 316986000.0 16739.100000000002 18086.699999999997 18009.4 17007.9 18723.5 13607.2 16689.5 15713.0 16073.400000000001 18518.100000000002 17821.1 True False 18438.441109325875 19610.929684279166 19231.626183319855 18058.439355256556 17408.42595256841 13496.387474652787 17324.62805534483 15399.591888389969 15397.890894754171 17348.864005681287 15629.21767726068 1.1797417817113394 1.2547608005237252 1.2304919273918877 1.1554282324399519 1.1138386010130463 0.8635357030242788 1.108476982859535 0.9853079153664358 0.9851990811515108 1.1100276651033252 1.0 13.931957945386491 -6.868261501118505 2.4354392179522675 0.993636744893726 1.217559523271297 0.6355277712028728 0.06855877020961106 0.09611423650958369 1.158435565724367 0.007832250340877832 0.01645603082995527 1.3543736596968827e-07 6.868261501118505 0.22392277837757102 DELHIVEAEAMNYEGSPIK ddPTM_A549_PD325901_60min_R1 1 DELHIVEAEAMNYEGSPIK 19 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 78.661 0.00035087 1962300.0 528.92 934.19 625.75 790.68 1028.1 683.47 726.28 820.28 660.17 621.12 750.63 False True 582.6155690296757 1012.9174698400899 668.2171579404313 839.5185078354323 955.8898027524547 677.9040469237565 753.9189828356656 803.918871902789 632.4253507030161 581.9023771989974 658.3072686356163 0.8850207141676919 1.5386697338758324 1.0150535924133937 1.275268476946013 1.4520419996783525 1.0297684367495377 1.1452387338791057 1.221190939557696 0.9606841376881009 0.8839373419118205 1.0 9.362617316995905 -8.76076734731353 24.99976177338655 0.9814341657889738 1.2047599763552568 0.26374621906957485 0.18104569440142967 17.01162154952129 632832.2226059485 0.02767773355613594 0.030480296599506806 1.7347330499026042e-09 8.76076734731353 0.22332581056628298 DELTDLDQSNVT(ph)EETPEGEEHHPVADTENKENEVEEVKEEGPK ddPTM_A549_MK2206_60min_R1 1 DELTDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPK 43 2 Q8NC51-4;Q8NC51-3 Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELTDLDQS(0.14)NVT(0.824)EET(0.036)PEGEEHHPVADTENKENEVEEVKEEGPK 86.404 1.7169999999999998e-08 33248000.0 1110.6 1155.9 751.65 642.37 1576.0 1352.4 1085.5 1286.4 1459.6 1466.6 1792.8 True False 1298.042128436929 1214.7303727519163 858.2452724763434 799.7506788370855 1344.1724877145753 1495.510070349536 1282.7212990604114 1468.7511394347753 1129.0029305022458 1135.2940414020638 1347.5982812371547 0.9632263164103096 0.9014039195989032 0.6368702635094164 0.5934637124224283 0.9974578525586761 1.1097595560722975 0.9518573278995405 1.089902799583862 0.8377889362294016 0.8424573236764697 1.0 10.396174778183775 -6.79559813915216 24.99988203872252 0.9553587419704764 0.7730830422564001 0.36464262111730705 0.126392752718683 174.35368788481853 127604.3382495384 0.019449469742295063 0.03675732532767685 1.6010388147205022e-07 6.79559813915216 -0.1822756997140763 DELTES(ph)PK ddPTM_A549_MK2206_60min_R1 2 DELTESPK 8 0 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.006)ES(0.994)PK;DELT(0.018)ES(0.982)PK 119.22 0.0012267 79666000.0 5495.7 5793.9 5472.2 5489.7 8272.5 6317.3 5640.4 7213.700000000001 7757.6 6219.299999999999 5739.3 True False 6423.239803035146 6088.784762252214 6248.2402448547155 6834.676746441996 7055.62620851449 6985.792492915646 6665.187669479816 8236.264066029727 6000.515986341615 4814.35581050856 4314.073413378184 1.4889036851149353 1.411377178554855 1.4483388774698573 1.584274557138337 1.6354905288896096 1.6193031095048849 1.5449870762075337 1.909161777471985 1.3909165216645774 1.1159652025343314 1.0 12.07483501197535 -9.806468458705494 0.9346251613004904 1.0538844170248938 1.5674323030800477 0.6631091949782175 0.13756927738419386 0.20649989941772307 0.37239174152344295 0.050706258046783186 0.029476589891351202 1.5614624374261182e-10 9.806468458705494 0.5135478860551539 DELTES(ph)PK ddPTM_A549_PD325901_60min_R1 2 DELTESPK 8 0 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.006)ES(0.994)PK;DELT(0.004)ES(0.996)PK 121.73 0.0011743 54834000.0 12961.900000000001 13436.8 12448.7 12374.2 13541.2 10879.0 11963.9 12321.900000000001 11503.2 15699.7 14421.3 True False 14277.782545953556 14569.166292453707 13293.543642114335 13138.52623015279 12590.112826603969 10790.405030920956 12419.192761397284 12076.130038156454 11019.76050745555 14708.418262672438 12647.571524152798 1.1288951810778518 1.1519338921809046 1.0510747946139651 1.0388181007762973 0.9954569383190203 0.8531602300342599 0.9819428763601468 0.9548180862306196 0.8712945790748325 1.162944066739143 1.0 13.62657277740179 -6.358032616297345 1.1623558681983222 0.9373620403316573 1.143462140529044 0.31988653583742843 0.08155894896414417 0.244598287771558 0.5931359254276208 0.00852888166681425 0.0373532262091056 4.384977645668901e-07 6.358032616297345 0.20610010019738667 DELTES(ph)PKYIQK ddPTM_A549_MK2206_60min_R1 2 DELTESPKYIQK 12 1 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.003)ES(0.997)PKYIQK;DELTES(1)PKYIQK 171.67 2.8786e-16 101657000.0 9752.9 9391.8 9273.5 8655.6 11341.3 9167.400000000001 7978.5 9079.7 11860.7 10348.9 10693.9 True False 11398.95108448814 9869.802504378797 10588.621744574439 10776.22238856465 9673.009793729263 10137.488183172385 9428.090174623212 10366.775280415055 9174.270387645918 8011.076302376801 8038.309493374622 1.4180781536072284 1.2278455454487958 1.3172697260912694 1.3406080466852746 1.2033636925403286 1.2611467860907768 1.172894646865001 1.2896710793431894 1.1413183823299642 0.9966120748373439 1.0 12.972676410200188 -9.45890773516346 0.19376145661120822 0.8691352161453862 1.3987716922444837 0.7986863439162019 0.05685095357471057 1.1573885808888504 0.1350746039251155 0.20527193851420664 0.11231083989496914 3.476100025229577e-10 9.45890773516346 0.5296364760990975 DELTES(ph)PKYIQK ddPTM_A549_PD325901_60min_R1 1 DELTESPKYIQK 12 1 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.023)ES(0.977)PKYIQK 159.13 1.8613999999999998e-14 77600000.0 12620.0 12866.0 13756.0 12774.0 14521.0 12376.0 13227.0 15176.0 14580.0 16880.0 16847.0 True False 13901.173109647027 13950.262973230929 14689.56488154786 13563.020968141112 13501.095054730466 12275.21395924972 13730.360723092128 14873.30277465832 13967.253303315774 15814.193919241176 14774.925801932006 0.9408624649627191 0.9441849766451456 0.9942225821280954 0.9179755722609164 0.9137842880378478 0.8308139156708715 0.929301500877704 1.0066583733850933 0.9453349201584066 1.0703399889272724 1.0 13.850863264913102 -9.960351672622938 0.5374265337610146 1.0002873916873818 0.9303359117665657 0.3475127035013319 0.04815021786260475 1.0636709332206473 0.6045822702864357 0.033667840005377585 0.011838498429569163 1.0955906755784778e-10 9.960351672622938 -0.06995147992081607 DENYRS(ph)LPR ddPTM_A549_MK2206_60min_R1 2 DENYRSLPR 9 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q8TEW0-6;Q8TEW0-7;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 DENY(0.001)RS(0.999)LPR;DENY(0.01)RS(0.99)LPR 77.64 0.00052885 19384200.0 832.69 962.23 559.29 760.04 669.0899999999999 656.09 759.74 675.05 862.7 1128.22 1235.02 True False 973.2277146840861 1011.2033969833702 638.6057319807013 946.2498341194922 570.6677473381633 725.5170083227049 897.7749237661513 770.7404047539216 667.2998274488131 873.3543184171798 928.3304491820122 1.0483634524124836 1.0892709572053578 0.6879077730816666 1.0193028085562306 0.6147247974479353 0.7815288284058612 0.9670855077060281 0.8302435899124613 0.7188171281431054 0.9407795674339089 1.0 9.858494629326053 -5.735725757847333 24.997985593110517 0.8475662215310565 1.0688174876154584 0.3241746694780939 0.127022961885964 221.0559933772193 214900.3552731265 0.01863731506525144 0.07213032904155893 1.8376984209087844e-06 5.735725757847333 0.22125126608440182 DENYRS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 DENYRSLPR 9 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q8TEW0-6;Q8TEW0-7;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 DENY(0.009)RS(0.991)LPR;DENY(0.024)RS(0.976)LPR 73.632 0.0006182000000000001 18412300.0 1036.33 1164.71 1169.7 985.78 1257.83 1288.0700000000002 1102.07 1195.63 1189.69 1132.51 1310.6999999999998 True False 1141.5374586941766 1262.8641992501011 1249.082875977503 1046.669391731183 1169.4843600779298 1277.5803849782471 1144.0098769258439 1171.7822216964098 1139.6914665584186 1061.0031253246343 1149.4922092118643 0.9930797699593442 1.098627889018899 1.0866388357985668 0.9105493567884374 1.0173921586469672 1.1114302252245842 0.9952306485924082 1.0193911818678862 0.9914738503011121 0.9230189790082166 1.0 10.166780972754285 DEPAES(ph)PSETPGPR ddPTM_A549_MK2206_60min_R1 1 DEPAESPSETPGPR 14 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 DEPAES(0.468)PS(0.468)ET(0.065)PGPR 44.309 0.059338999999999996 1559300.0 0.0 206.76 157.75 269.83 306.06 242.43 0.0 249.99 326.44 300.85 306.99 True False 0.0 217.28320085663668 180.1213220689726 335.9383621131289 261.03897943523054 268.0837816879903 0.0 285.4268480622664 252.5018612175617 232.88777605060065 230.75591050702488 0.0 0.9416148881266552 0.7805707843981279 1.4558169338977862 1.1312342070097647 1.1617634456207313 0.0 1.2369210714261518 1.0942378925972291 1.0092386172856485 1.0 7.850223790841737 -5.278424110588888 4.785669663112013 1.0114764914017245 2.689350720840357e-19 0.3880132912187527 0.35297065596686517 0.12196226167083055 7.636968642597931 0.04536221782984353 0.39413631107548375 5.267152460370844e-06 5.278424110588888 -1.0114764914017245 DEPAES(ph)PSETPGPR ddPTM_A549_PD325901_60min_R1 1 DEPAESPSETPGPR 14 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 DEPAES(0.607)PS(0.384)ET(0.009)PGPR 80.469 0.00051325 1122200.0 818.8 338.01 787.38 647.85 758.09 821.98 676.59 718.97 1123.7 769.22 949.42 True False 901.9239732312989 366.49528894619795 840.816341700578 687.8662231258975 704.8443736685224 815.2860674066003 702.3380026942542 704.6295793289466 1076.4747967720111 720.6513179240937 832.6473588692521 1.0832004252750234 0.4401566702185955 1.0098108553931158 0.8261195040119149 0.8465100695517871 0.9791492865764581 0.8434999465416427 0.8462521039949547 1.292833977440198 0.8654940296727168 1.0 9.701561807420182 -8.741392811775683 24.927589075794227 1.138282704612149 0.8523113646318409 0.13429697756118908 0.18643330035786632 182.335844632162 226731.63317874353 0.029132123729384132 0.03301186833967577 1.8138743029593495e-09 8.741392811775683 -0.2859713399803082 DEPAESPS(ph)ETPGPRPAGPAGDEPAESPSETPGPR ddPTM_A549_PD325901_60min_R1 1 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPR 34 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 DEPAES(0.303)PS(0.347)ET(0.347)PGPRPAGPAGDEPAES(0.002)PS(0.001)ETPGPR 53.498999999999995 0.0013899000000000001 2772700.0 291.12 271.17 163.81 445.66 435.91 152.76 567.41 306.26 370.93 210.77 232.24 True False 320.6742880887832 294.0224475711978 174.92713166955187 473.18740603270436 405.2931854078614 151.51597320741652 589.0030980486658 300.1514040436778 355.3411020438214 197.4619462297668 203.6759522906566 1.5744337241696735 1.4435795893646388 0.8588501966099631 2.323236497539191 1.9898921833908312 0.743907032241072 2.891863724825632 1.4736712933854141 1.7446394532464513 0.9694907229302059 1.0 7.670131843328212 -10.668523747459343 0.8981345816605873 0.9935628496724218 1.6734419458633523 0.1725272952613882 0.5762620738865711 0.8730664429085088 1.2345622420945492 0.3893975761245435 0.09946745228723278 2.1452418096153618e-11 10.668523747459343 0.6798790961909305 DEPDS(ph)PVLYR ddPTM_A549_MK2206_60min_R1 2 DEPDSPVLYR 10 0 Q6ZTQ3-4;Q6ZTQ3-3;Q6ZTQ3-2;Q6ZTQ3 Q6ZTQ3-4 RASSF6 Ras association domain-containing protein 6 1 DEPDS(1)PVLYR;DEPDS(1)PVLYR 116.77 7.845e-05 9077100.0 1059.15 1131.76 1096.43 990.48 1662.25 1156.68 1105.57 1102.53 2345.92 1653.95 1548.34 True False 1237.90862626866 1189.361749862193 1251.92026089435 1233.147644464336 1417.7352269692592 1279.0791098579564 1306.4377582701231 1258.817003856516 1814.5728656644496 1280.3215462818373 1163.844445989925 1.0636375252156132 1.0219250123675796 1.075676620881677 1.059546787986314 1.218148380442185 1.0990120838442605 1.1225192187594395 1.0816024497035004 1.5591197534315149 1.1000796117498683 1.0 10.184682531915568 DEPDS(ph)PVLYR ddPTM_A549_PD325901_60min_R1 2 DEPDSPVLYR 10 0 Q6ZTQ3-4;Q6ZTQ3-3;Q6ZTQ3-2;Q6ZTQ3 Q6ZTQ3-4 RASSF6 Ras association domain-containing protein 6 1 DEPDS(1)PVLYR;DEPDS(1)PVLYR 123.79 2.6279e-05 8857300.0 835.45 1077.81 915.5899999999999 1166.4699999999998 1202.8600000000001 824.79 994.35 891.86 968.98 1168.6100000000001 1211.46 True False 920.2642689742166 1168.6408312745239 977.7274432899393 1238.5202026544198 1118.3752632417247 818.0731836982526 1032.190533379198 874.0711526493649 928.2571403187184 1094.82376516377 1062.4581000776725 0.8661652340990571 1.0999406293660792 0.920250354549004 1.165712043198575 1.0526299937474846 0.7699815961104218 0.9715117549611965 0.8226876453626404 0.8736882332120738 1.0304630037492597 1.0 10.05319023179281 DEPSKVQT(ph)LNEQDWER ddPTM_A549_MK2206_60min_R1 2 DEPSKVQTLNEQDWER 16 1 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 DEPS(0.01)KVQT(0.99)LNEQDWER;DEPS(0.011)KVQT(0.989)LNEQDWER 66.122 0.0010345999999999999 19660800.0 2642.7 2869.6000000000004 2106.2 2246.82 4744.9 3355.1 2930.4 3248.1000000000004 4335.7 3705.5 4189.9 True False 3088.723152188251 3015.6503829474027 2404.8908306920443 2797.2910008635818 4046.931495531021 3710.1344550648646 3462.8157482880065 3708.5281218890636 3353.6708726901825 2868.4249764184838 3149.432194642767 0.9807238134677789 0.9575219266752498 0.7635950489052601 0.8881889902636472 1.2849717807593743 1.1780328090174035 1.0995047787275147 1.1775227700400495 1.0648493650362845 0.9107752760315714 1.0 11.62087603587402 DEQLS(ph)PEEEEK ddPTM_A549_MK2206_60min_R1 3 DEQLSPEEEEK 11 0 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 DEQLS(1)PEEEEK;DEQLS(1)PEEEEK;DEQLS(1)PEEEEK 114.88 2.1986999999999998e-05 7645170.0 3434.48 3614.01 3305.98 2887.6200000000003 4187.83 3722.0499999999997 3780.98 3838.64 5780.93 4771.36 4339.79 True False 4014.1362590258086 3797.947672315215 3774.8176756486982 3595.08702963019 3571.8057545848574 4115.914860503172 4467.93512420215 4382.778975341967 4471.558585248253 3693.5064621465644 3262.1003708892185 1.2305373233906938 1.1642645046142248 1.1571739819335227 1.1020773798723436 1.0949404826594027 1.2617376513712888 1.3696498011139469 1.3435451019391111 1.370760576575805 1.1322479513834667 1.0 11.671585457379074 -5.197009337674928 17.81029324288501 1.1950466188714304 1.2305475048435215 0.004334517412354577 0.11712247364905302 12958.209912913968 3577218.9534558365 0.02121918004602135 23.691031447203333 6.353172718809547e-06 5.197009337674928 0.03550088597209111 DEQLS(ph)PEEEEK ddPTM_A549_PD325901_60min_R1 2 DEQLSPEEEEK 11 0 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 DEQLS(1)PEEEEK;DEQLS(1)PEEEEK 65.395 0.0057003999999999996 1751830.0 596.5699999999999 694.3 549.54 564.49 792.08 615.85 829.38 594.5 468.90999999999997 864.83 573.99 True False 657.1333472283773 752.811097646062 586.8350890524725 599.3572652501934 736.4470333276571 610.8347217844165 860.9425097541499 582.6422311237725 449.20334337844974 810.2244862071891 503.39286882239907 1.3054085346215325 1.495474299044271 1.1657596390375418 1.1906351924537322 1.4629667580521117 1.2134353893676706 1.7102795114443647 1.1574304429197888 0.8923514241059545 1.6095271434864975 1.0 8.975540968873077 -8.532381128631313 6.615759598606154 0.9521798571920851 1.358155996659055 0.0 0.24879512135407192 0.07008199179596752 14.318721509946181 0.024339265303936573 0.028083691971365888 2.9350727570164755e-09 8.532381128631313 0.40597613946697 DEQLS(ph)PEEEEKR ddPTM_A549_MK2206_60min_R1 2 DEQLSPEEEEKR 12 1 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 DEQLS(1)PEEEEKR;DEQLS(1)PEEEEKR 96.163 0.00010757 10752500.0 1631.22 1950.3 1694.85 1712.37 2344.1000000000004 1672.69 1462.3600000000001 1629.58 2521.08 2363.5 2150.77 True False 1906.5300564999884 2049.5619395951767 1935.2052152684498 2131.900726871211 1999.2859952104927 1849.6929455582404 1728.0518829055577 1860.5779553794468 1950.0594053374914 1829.583708477961 1616.6744507677577 1.1792912639861282 1.2677641677468467 1.1970283901928567 1.3186951311433004 1.2366657951828417 1.144134457422657 1.068892925279364 1.1508674207697533 1.2062165047585243 1.1316958139649531 1.0 10.65881347766771 -7.360001881901937 3.3829773183299623 1.1028920310610941 1.243991322131012 0.520054777122086 0.058998159354921746 0.19832902575327818 4.299346762179345 0.012408001889983438 0.020559945612639068 4.365139407166847e-08 7.360001881901937 0.1410992910699178 DEQLS(ph)PEEEEKRR ddPTM_A549_MK2206_60min_R1 2 DEQLSPEEEEKRR 13 2 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 DEQLS(1)PEEEEKRR;DEQLS(1)PEEEEKRR 82.59 0.00017046 18222700.0 1932.3000000000002 2457.9 2556.8 2247.97 2816.1 2443.2 1895.3 1809.38 3733.0 3111.8 3642.1000000000004 True False 2258.4249998007185 2582.996611460279 2919.392686313465 2798.7227509152085 2401.855420465113 2701.7378023350975 2239.651476839426 2065.8651559938535 2887.4814603760533 2408.8422187610404 2737.666053153639 0.824945393613344 0.9435031743498483 1.0663801317003172 1.0223024636957585 0.8773368898293162 0.986876320880279 0.8180879016487318 0.7546081647226811 1.0547237699243248 0.8798889901075363 1.0 11.41873075870768 DEQLS(ph)PEEEEKRR ddPTM_A549_PD325901_60min_R1 2 DEQLSPEEEEKRR 13 2 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 DEQLS(1)PEEEEKRR;DEQLS(1)PEEEEKRR 101.15 4.7815e-05 25487000.0 2675.8 3118.0 2887.2 2802.1000000000004 3333.3 3668.3 2800.6 3010.7 3179.7 2888.2 3894.0 True False 2947.4452461801534 3380.764802621953 3083.142754144008 2975.1793529691727 3099.1805072607294 3638.426581020989 2907.1783655471218 2950.649226651541 3046.0682667046062 2705.838559096704 3415.0626860997963 0.863072077176513 0.9899568802594914 0.9028070748725082 0.8711931892433294 0.9075032560530175 1.0654055036325811 0.8512811133394718 0.8640102679993137 0.8919509088670335 0.792324711962149 1.0 11.73769634519657 -10.798897860803901 1.0759823303973435 0.9994078308820449 0.912950797976859 0.0 0.08604303581363136 0.6224830931384095 1.293356429990025 0.03974667500412554 0.010225463457410464 1.588920393614655e-11 10.798897860803901 -0.08645703290518592 DERS(ph)DSRAQAVSEDAGGNEGR ddPTM_A549_MK2206_60min_R1 2 DERSDSRAQAVSEDAGGNEGR 21 2 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 DERS(0.479)DS(0.411)RAQAVS(0.11)EDAGGNEGR;DERS(0.5)DS(0.5)RAQAVSEDAGGNEGR 69.98100000000001 0.00015737 21313100.0 0.0 204.85 247.51 167.32 250.22 159.08 0.0 0.0 410.78 324.32 578.67 True False 0.0 215.27599001490626 282.6106397799772 208.31340751128016 213.41296946442975 175.91374001124234 0.0 0.0 317.73898588086655 251.05588674997773 434.9702685204731 0.0 0.49492116035230505 0.6497240391653926 0.47891412951015366 0.49063806174693725 0.40442704419684367 0.0 0.0 0.7304843776142168 0.5771794187311473 1.0 8.764772981715437 -8.95230528940532 5.2319362621103895 0.8849255894616569 0.3351189202417696 0.4065933966610583 0.2379903473707501 0.11424023824990742 6.455889604287386 0.04307894630430938 0.04491991335966697 1.1160784192437333e-09 8.95230528940532 -0.5498066692198873 DERS(ph)DSRAQAVSEDAGGNEGR ddPTM_A549_PD325901_60min_R1 2 DERSDSRAQAVSEDAGGNEGR 21 2 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 DERS(0.555)DS(0.444)RAQAVS(0.001)EDAGGNEGR;DERS(0.5)DS(0.5)RAQAVS(0.001)EDAGGNEGR 76.19800000000001 5.2968999999999994e-05 35975000.0 294.16 355.8 433.46 536.5899999999999 325.7 1051.63 229.62 696.66 408.88 537.13 344.79 True False 324.02290665085354 385.78451468020876 462.87720220672674 569.7339456156908 302.82395560400187 1043.0658739468151 238.3583147528853 682.7645697808027 391.6961955185015 503.2155201328204 302.3830158038903 1.071564505001821 1.2758140984029613 1.5307645536114518 1.8841466479228126 1.001458216159857 3.44948565042189 0.7882662130318586 2.2579461613135305 1.2953644055608433 1.664165954542829 1.0 8.240233298567743 -8.97429177885806 13.314294864566815 1.1301863233020635 1.6644408892423272 0.028980179029259756 0.7145641518066674 1.6932032074592378 874.9451727442927 0.1130543798706086 0.11751168732132593 1.0609825012166383e-09 8.97429177885806 0.5342545659402638 DERSDS(ph)RAQAVSEDAGGNEGR ddPTM_A549_MK2206_60min_R1 2 DERSDSRAQAVSEDAGGNEGR 21 2 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 DERS(0.196)DS(0.787)RAQAVS(0.017)EDAGGNEGR;DERS(0.146)DS(0.853)RAQAVS(0.001)EDAGGNEGR 83.881 1.4847999999999999e-05 23881000.0 172.7 296.03 290.41 236.94 345.35 158.12 169.06 0.0 173.79 683.77 755.39 True False 201.8475378903814 311.0966625536376 331.59450486244265 294.99031063664086 294.5494724823785 174.85215344843874 199.77601365191444 0.0 134.42684248560244 529.3058821011107 567.8058152965947 0.35548691551344164 0.5478927023513057 0.5839927945951618 0.5195267513816356 0.5187503624430474 0.3079435763740889 0.3518386185382074 0.0 0.23674791427661632 0.9321952467581307 1.0 9.149253814561925 -10.785968877252902 1.068180674002701 0.9950919747743586 0.37922598084797343 0.6606943275452928 0.1613476195691724 0.268084749193195 0.549888858182204 0.12092164274341796 0.0314305190619502 1.636933824442559e-11 10.785968877252902 -0.6158659939263852 DERSDS(ph)RAQAVSEDAGGNEGR ddPTM_A549_PD325901_60min_R1 2 DERSDSRAQAVSEDAGGNEGR 21 2 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 DERS(0.14)DS(0.86)RAQAVSEDAGGNEGR;DERS(0.17)DS(0.83)RAQAVSEDAGGNEGR 102.27 2.3786e-10 36772000.0 406.2 222.11 347.71000000000004 521.81 620.97 1076.6399999999999 683.43 797.23 635.64 419.37 725.65 True False 447.4371249713648 240.82798919511282 371.3076915500876 554.041018583506 577.3552094302028 1067.8722007988545 709.4383026372461 781.328622235164 608.9262612976429 392.890906629868 636.3996502743496 0.703075692732509 0.37842256684348075 0.5834504959108922 0.8705866169861358 0.9072211293348559 1.6779899240021559 1.114768530013192 1.2277326392280952 0.9568299747417162 0.6173650574139916 1.0 9.313789232628475 -6.436400228876482 2.214773046561904 1.0578488797327223 0.5281961537101822 0.448051733739655 0.251655650821782 0.19958916148524328 1.9068048538672255 0.032843157786322005 0.08975656584073378 3.661000356089998e-07 6.436400228876482 -0.5296527260225401 DES(ph)PMEK ddPTM_A549_MK2206_60min_R1 2 DESPMEK 7 0 Q53EU6 Q53EU6 AGPAT9 Glycerol-3-phosphate acyltransferase 3 1 DES(1)PMEK;DES(1)PMEK 99.01299999999999 0.011442 11402700.0 5361.700000000001 5373.1 4720.9 4159.3 3294.8 1632.91 1551.49 1193.72 2392.7 7533.8 6129.9 True False 6266.6238790206025 5646.567839634335 5390.394607641286 5178.328686718073 2810.1392845951664 1805.703452362068 1833.3756501881514 1362.9334656141793 1850.7572703567582 5831.909347548657 4607.676653366601 1.3600398531528661 1.2254696378290058 1.1698725872404243 1.1238481074696343 0.6098820503261523 0.3918902275928433 0.397895900279503 0.29579624790258474 0.4016682179736943 1.2656941418160428 1.0 12.169823762954412 -6.6980129095797905 4.032636501397112 0.6223046310715449 1.233913131540106 0.5220206054370784 0.27597279931255614 0.14339373988582768 4.6526204440129835 0.04114813368474552 0.08727045118520732 2.0044124445059342e-07 6.6980129095797905 0.6116085004685611 DES(ph)PMEK ddPTM_A549_PD325901_60min_R1 1 DESPMEK 7 0 Q53EU6 Q53EU6 AGPAT9 Glycerol-3-phosphate acyltransferase 3 1 DES(1)PMEK 110.88 0.0082681 9512700.0 3961.5 4052.4 3849.4 3923.6 4231.2 3843.9 3546.2 3792.6 4103.6 4747.8 4540.4 True False 4363.668563697839 4393.9099698990385 4110.643432322645 4165.95186085787 3934.01510884757 3812.5965528409856 3681.1525815551 3716.953617762856 3931.1399626534026 4448.023097735383 3981.9595839670023 1.0958595816159846 1.103454185620245 1.0323167138294864 1.046206465186562 0.9879595776630993 0.9574674158401955 0.9244575450682436 0.9334483536017872 0.9872375346253588 1.1170437579640293 1.0 11.959262862750567 -6.2181740619774155 1.2330464622280974 0.9808133506536881 1.1024667645839068 0.40987870853398667 0.04962087846194732 0.2461018648588557 0.655830899983785 0.004947119685219498 0.024131823176781572 6.05098307275481e-07 6.2181740619774155 0.12165341393021867 DESS(ph)VT(ph)CKLACT(ph)AVR ddPTM_A549_MK2206_60min_R1 1 DESSVTCKLACTAVR 15 1 P42858 P42858 HTT Huntingtin 3 DES(0.649)S(0.676)VT(0.676)CKLACT(0.999)AVR 47.751999999999995 0.0077661 7793900.0 1508.3 1562.0 1679.3 1561.5 2295.8 1533.7 1164.9 1611.8 2088.4 2158.2 2710.2 True False 1762.8641656054574 1641.499128158573 1917.4499914448536 1944.067570098398 1958.090861227871 1695.9951160123346 1376.547251290164 1840.2775859304809 1615.3807344895122 1670.661121065003 2037.182542285218 0.8653442335255618 0.8057692887536797 0.9412264005040737 0.9542922785493891 0.9611759479498457 0.8325199538131939 0.6757112937685086 0.9033444709702557 0.7929484476523405 0.8200841536718315 1.0 10.992359543832055 -10.959176772228082 1.2231685450015721 1.0000021776332872 0.8545134257412381 0.0 0.09528522523599489 0.4922121215201847 1.309168698506515 0.05973021670923633 0.013868432756115916 1.0985585987088792e-11 10.959176772228082 -0.14548875189204913 DETEFYLGK ddPTM_A549_MK2206_60min_R1 2 DETEFYLGK 9 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 132.9 0.00013149 7141200.0 6545.3 6661.1 6668.200000000001 6360.799999999999 8642.099999999999 7325.7 6518.7 7890.1 9693.2 9463.0 9292.5 False True 7649.9866227788825 7000.12153814153 7613.851028971939 7919.196285547167 7370.85853812064 8100.900711593896 7703.063410580474 9008.545837417852 7497.705676859666 7325.301727661073 6984.915790047003 1.0952152971807558 1.0021769407894932 1.090041921453244 1.1337568731796948 1.0552537438781406 1.1597707052012123 1.1028140699357865 1.2897143084035996 1.0734138967778755 1.0487315735572782 1.0 12.770027007309865 -9.63410830265102 1.5168386663734792 1.0176917465582471 1.1115392469946572 0.18670093600653703 0.06960165180835372 0.360598882420213 1.6770458403377806 0.01742095674522005 0.013151694360900789 2.322157633601387e-10 9.63410830265102 0.0938475004364101 DETEFYLGK ddPTM_A549_PD325901_60min_R1 2 DETEFYLGK 9 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 133.23 0.00013072 14286600.0 12252.5 11936.400000000001 11904.8 12699.099999999999 13960.5 12526.6 12013.4 13714.099999999999 13519.1 14203.8 14168.7 False True 13496.36478018622 12942.322318799443 12712.731317377942 13483.494565251345 12979.96264111043 12424.587522780988 12470.576510984729 13440.56151699667 12950.939240936643 13306.96964396433 12426.039722789461 1.086135653939185 1.0415484424263601 1.023071839538923 1.0850999084223514 1.0445775911455577 0.9998831325151963 1.0035841498328375 1.081644821426618 1.0422418992580968 1.070893860057379 1.0 13.601078950866645 -7.0109126997064815 24.225732773488357 1.0229076026051787 1.0563665819655776 0.08394380380826039 0.03103481321100455 423.73115375043716 940671.6862909023 0.004349004192976805 0.007867800369758943 9.751856462798101e-08 7.0109126997064815 0.03345897936039899 DEVQEVVFVPAGT(ph)HTPGSR ddPTM_A549_MK2206_60min_R1 1 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.644)HT(0.343)PGS(0.013)R 69.619 0.0010856 21297000.0 766.46 486.42 587.8 417.07 747.48 583.77 693.02 862.97 761.37 968.84 1008.1 True False 895.8197098521237 511.1767003321981 671.1588786823587 519.252168722984 637.5266821807688 645.5441539248358 818.9327634038198 985.2986402347852 588.9209106580538 749.978371111397 757.7609478554086 1.182193028536829 0.6745883405299712 0.8857132062319278 0.685245353686483 0.8413295564849006 0.8519100327772692 1.0807270626990446 1.3002763510357016 0.7771856181356395 0.9897295093313562 1.0 9.565598980469726 -7.554648705493295 24.974383571725625 0.9427231638622754 0.8372996430451433 0.11479784973076268 0.17855208173456927 440.53121795123957 346300.21659779205 0.028630171534886124 0.04246557689875743 2.788375733348105e-08 7.554648705493295 -0.10542352081713213 DEVQEVVFVPAGT(ph)HTPGSR ddPTM_A549_PD325901_60min_R1 1 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.586)HT(0.341)PGS(0.073)R 103.16 1.8054e-09 39521000.0 832.94 740.0 618.29 826.52 743.77 788.87 504.01 836.86 651.94 853.46 660.14 True False 917.4994556219801 802.3623970302262 660.250877479807 877.5722632368868 691.530161067205 782.4457042690154 523.1903763548548 820.1681707960307 624.5412289824197 799.5723899476051 578.9469649722442 1.5847728913579617 1.3858996515659996 1.1404341285586679 1.515807692815108 1.194462019678017 1.3514980673687913 0.9036930980024008 1.4166551004120922 1.0787537836256924 1.381080545065018 1.0 9.177287384490148 -2.0000000000000067 0.13451690774769906 0.9102844883470111 2.9217749174110255 0.11132771326402002 0.1968295938443628 41.046366887085235 0.35573348058247384 0.3641596429635074 15.873638104642641 0.009999999999999846 2.0000000000000067 2.0114904290640143 DEVQEVVFVPAGTHT(ph)PGSR ddPTM_A549_MK2206_60min_R1 1 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.231)HT(0.764)PGS(0.006)R 74.819 0.00042506 21813000.0 455.98 281.29 460.22 508.26 593.12 542.43 485.06 433.89 683.03 662.01 424.01 True False 532.938276359329 295.6064595132684 525.4861162762762 632.7837228166586 505.8728337013132 599.8295825641071 573.189123281661 495.3952362323961 528.32479557478 512.4614812140868 318.71661491932537 1.6721383555552265 0.927489957146079 1.6487565808556577 1.9854117833700982 1.5872182685843392 1.882015415845007 1.7984287497115534 1.554343931388052 1.6576631742543806 1.60789070047008 1.0 8.31613041954914 -10.612749368435516 0.7720727323107043 0.97565646650744 1.636253160057676 0.02039278200900263 0.3109709952885359 0.5422811280575547 0.5443958901425976 0.21691454350348083 0.05122141136277179 2.4392180862496586e-11 10.612749368435516 0.660596693550236 DEVQEVVFVPAGTHT(ph)PGSR ddPTM_A549_PD325901_60min_R1 1 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.304)HT(0.653)PGS(0.043)R 104.26 1.6164000000000001e-09 40565000.0 670.61 683.18 445.34 564.96 701.69 755.64 540.05 678.39 884.06 488.08 663.12 True False 738.6898335230106 740.7539762204183 475.56345044697014 599.8562960827461 652.4057150990856 749.4863183716432 560.6018982766991 664.8589792633402 846.906032601464 457.2625455037458 581.5604438640207 1.2701858273148467 1.2737351448779413 0.8177369273728758 1.0314599323454043 1.121819274303377 1.2887505095633474 0.9639615351964651 1.1432328080050715 1.4562648500892295 0.7862683068084699 1.0 9.183785334235198 -8.535060011573513 24.92282743838632 1.2198947270743625 1.1051301002611906 0.0 0.21103061582653965 518.4099130170197 1060660.5944868154 0.03503993266334414 0.0397443906683562 2.917023906669197e-09 8.535060011573513 -0.1147646268131719 DEVVS(ph)PLPSALQGPSGSLSAPPAASVISAPPSSSSR ddPTM_A549_MK2206_60min_R1 1 DEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSR 36 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DEVVS(0.995)PLPS(0.005)ALQGPSGSLSAPPAASVISAPPSSSSR 80.681 3.1301e-06 4046500.0 0.0 454.71 444.77 251.59 595.86 0.0 291.71 421.94 542.72 362.92 563.78 True False 0.0 477.85279677655865 507.84507395636734 313.22956129430406 508.2097833309693 0.0 344.70993104459944 481.75128713705584 419.7947865457518 280.93611994111336 423.7778664635674 0.0 1.127602063704382 1.1983756447554517 0.7391361986604195 1.199236259250601 0.0 0.8134212716704837 1.1368014359911656 0.9906010194655646 0.662932498777082 1.0 8.72716442878938 -8.018293956634079 24.250925378406748 1.004558247729984 0.7446176762289368 0.059885239883693764 0.4048124594201475 960.318555855236 1273021.7337713793 0.05944512578548292 0.07753086312370017 9.587514711676857e-09 8.018293956634079 -0.2599405715010471 DEVVS(ph)PLPSALQGPSGSLSAPPAASVISAPPSSSSR ddPTM_A549_PD325901_60min_R1 2 DEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSR 36 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DEVVS(0.926)PLPS(0.04)ALQGPS(0.014)GS(0.014)LS(0.005)APPAASVISAPPSSSSR;DEVVS(0.57)PLPS(0.107)ALQGPS(0.107)GS(0.107)LS(0.107)APPAAS(0.001)VISAPPSSSSR 52.718 0.0013847999999999998 10023500.0 961.45 1015.3600000000001 1296.75 901.69 1648.49 1392.75 1190.84 1314.1599999999999 1178.75 1239.56 1484.8200000000002 True False 1059.0556962179187 1100.9279506062303 1384.755252991217 957.3853434134296 1532.7057493817656 1381.4079057647914 1236.1580678526516 1287.9480478614232 1129.211236713544 1161.293970055367 1302.1965530494858 0.8132840574165402 0.8454391528130493 1.0633995687889015 0.7352080153886318 1.1770156707852382 1.0608290296344345 0.9492868530160172 0.9890580994438241 0.8671588279581568 0.8917962248754592 1.0 10.346731509439067 -5.588596453611337 10.132541315159486 0.9573912782001694 0.8212838138131057 0.18917930122979476 0.1107544116130623 0.4378616364855997 64.2430975730473 0.014649596353233188 0.05689927289787626 2.5787161869195653e-06 5.588596453611337 -0.13610746438706378 DFDIAEQNES(ph)SDEESLRK ddPTM_A549_MK2206_60min_R1 1 DFDIAEQNESSDEESLRK 18 1 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 DFDIAEQNES(0.491)S(0.491)DEES(0.017)LRK 56.055 0.0038389 4197000.0 947.2 1401.7 1315.5 1164.8 1754.2 1071.1 1411.4 1461.0 1726.9 1683.9 1456.3 True False 1107.0642031833775 1473.0405428552315 1502.0576810252521 1450.1760522898596 1496.1595037746883 1184.4430910613623 1667.8331105424816 1668.1012241248488 1335.759907292634 1303.5058204806594 1094.6605181646974 1.0113310791910866 1.3456596985199798 1.3721675862975262 1.3247724095514268 1.3667794525768977 1.0820186454218648 1.5236076234290086 1.5238525519506079 1.2202503745473188 1.1907854525219481 1.0 10.096267807733069 -9.790756069302367 1.042629015796627 1.0356509521266313 1.3178279430551567 0.19189543929206676 0.1583167723382058 0.3468969575714585 0.7733161258413752 0.04749600560166468 0.02944818601698116 1.6189891218595472e-10 9.790756069302367 0.28217699092852544 DFDS(ph)S(ph)EDEKHSK ddPTM_A549_PD325901_60min_R1 2 DFDSSEDEKHSK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 2 DFDS(0.992)S(0.845)EDEKHS(0.163)K;DFDS(0.877)S(0.66)EDEKHS(0.463)K 97.836 7.3549e-05 100071000.0 20520.7 19478.1 19126.2 19732.1 22929.6 17284.1 18247.5 18695.7 18591.9 21482.9 22363.8 True False 22603.946357459085 21119.587845397906 20424.218947183825 20950.90700214944 21319.10399882569 17143.34402012509 18941.91859791513 18322.799597007073 17810.547098073825 20126.466027705344 19613.19437580858 1.1524867354264012 1.0768051058244419 1.0413509679165565 1.0682047299745743 1.0869776534270839 0.8740719992695393 0.9657742759781436 0.9342078218327804 0.9080900722649143 1.0261697121877222 1.0 14.259536904106861 -7.240941370178891 24.848962783706018 0.9493284521634676 1.081324257298371 0.6771712226963045 0.045946503016031995 357.21969112914223 433044.0759980095 0.006816570735767823 0.01179773948158627 5.741939732489261e-08 7.240941370178891 0.1319958051349034 DFDS(ph)S(ph)EDEKHSKK ddPTM_A549_PD325901_60min_R1 2 DFDSSEDEKHSKK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 2 DFDS(0.999)S(0.999)EDEKHS(0.002)KK;DFDS(1)S(1)EDEKHSKK 59.898 0.0026569000000000002 29297000.0 3861.2999999999997 3868.7 3701.4 4155.5 4984.1 4591.6 4733.6 4100.6 4288.1 4599.299999999999 4885.0 True False 4253.296333461177 4194.728926203828 3952.599262326346 4412.175797174759 4634.034010211563 4554.20753194013 4913.739738325311 4018.810316141531 4107.886069269437 4308.899413078551 4284.1759685663865 0.9927921646235407 0.9791215293165257 0.9226043214207664 1.0298773508715622 1.081662855170314 1.0630299888134858 1.146950959619335 0.9380591146647848 0.9588509200858196 1.0057708751212753 1.0 12.064802023332023 -3.7157829875916857 12.623265739751407 0.9982781993414913 0.4846600256096414 0.0 0.06439329071004828 0.0 0.0 0.008869678282046317 0.0 0.0001924052917852621 3.7157829875916857 -0.5136181737318499 DFDS(ph)SEDEKHSK ddPTM_A549_MK2206_60min_R1 2 DFDSSEDEKHSK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 DFDS(0.5)S(0.5)EDEKHSK;DFDS(0.57)S(0.43)EDEKHSK 134.9 1.7087000000000003e-08 30113100.0 6255.8 6353.200000000001 5539.7 5386.3 6921.3 5502.700000000001 5149.4 6006.6 7322.6 7577.4 9927.9 True False 7311.626100374342 6676.550743288758 6325.312759844612 6705.943741800198 5903.185938590666 6084.992061603362 6084.979325086763 6858.053944441013 5664.04279178936 5865.660077267145 7462.528433899125 0.9797786588203407 0.8946767576737127 0.8476098705515651 0.8986155029356966 0.7910436778739733 0.8154062145963565 0.8154045078669669 0.9189987020066498 0.7589978171553757 0.7860151059018979 1.0 12.865448808040147 -11.050079665875515 1.3586303738552497 0.9998473248045072 0.8455568868539478 0.0 0.08717004172166827 0.3299340822401326 1.0877738242411439 0.04622738011739914 0.010347163179769659 8.910874643218344e-12 11.050079665875515 -0.1542904379505594 DFDS(ph)SEDEKHSK ddPTM_A549_PD325901_60min_R1 1 DFDSSEDEKHSK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 DFDS(0.699)S(0.301)EDEKHSK 190.44 5.3525999999999995e-20 28534000.0 4873.0 4856.1 5294.1 5071.9 5599.7 4268.6 4341.5 4812.0 4968.3 5177.3 5396.9 True False 5367.703372687004 5265.340589484435 5653.389462009488 5385.179743879352 5206.396389916274 4233.837936849819 4506.718158259958 4716.020885059025 4759.499628728652 4850.404394436455 4733.115513767847 1.1340740273659593 1.1124470920197138 1.1944330210333378 1.1377663883788085 1.0999935190197094 0.8945139674986354 0.9521673716076996 0.996388292519146 1.005574365316895 1.0247804813399195 1.0 12.208574416775637 -7.058271516425898 6.45557129982789 0.9911816963205963 1.1429720515520028 0.8086643294900073 0.03817023059322721 0.07900274888643671 6.997825789576148 0.005724175782946223 0.010043759536783655 8.744369153689483e-08 7.058271516425898 0.1517903552314065 DFDSS(ph)EDEKHSK ddPTM_A549_MK2206_60min_R1 1 DFDSSEDEKHSK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 DFDS(0.423)S(0.577)EDEKHSK 125.97 7.414e-07 9471500.0 4371.6 3642.5 3680.9 3800.8 4671.7 3305.0 3726.2 4004.2 5188.4 6108.1 7858.4 True False 5109.419204641528 3827.8876916245827 4202.906969278486 4731.996170624393 3984.4991185635686 3654.7329063185553 4403.202307285953 4571.8076123482015 4013.2356841722767 4728.275967740316 5906.942399193474 0.8649854458271273 0.6480319991180611 0.7115198837646268 0.8010906236821429 0.6745451113773527 0.6187182232922346 0.7454283468020885 0.7739719305494549 0.6794099913214388 0.8004608218942357 1.0 12.528195828431903 -10.781603762273061 0.8034857369966943 1.0191741507179946 0.7180311616489897 0.2774921213917281 0.08909059622510528 0.3196841957800245 0.32732099897194356 0.06256349009785239 0.012286334647915209 1.6534696881774798e-11 10.781603762273061 -0.30114298906900483 DFDSS(ph)EDEKHSK ddPTM_A549_PD325901_60min_R1 1 DFDSSEDEKHSK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 DFDS(0.163)S(0.837)EDEKHSK 131.61 1.7884e-08 24233000.0 8061.8 8665.5 8519.3 9583.0 10827.0 8918.1 9439.9 9264.8 9734.3 11090.0 11428.0 True False 8880.22800121651 9395.772096574894 9097.470928712606 10174.92014542792 10066.548871122293 8845.473950386635 9799.140560211486 9080.006295905003 9325.201222940099 10389.775507368764 10022.42844806072 0.8860355598682055 0.9374745996209052 0.9077112374369619 1.0152150447526223 1.0044021689244496 0.8825679321360664 0.9777211791526994 0.9059686824366333 0.9304333047889676 1.0366525000614122 1.0 13.290944497412646 -9.470008177873428 0.007433853077726924 1.919998105288326 1.1856729672566067e-06 0.236809215811557 0.046218631100046884 3942.9634629645902 13.928492031390679 1824.6098312979461 1771.9715363733153 3.388377756792916e-10 9.470008177873428 -1.9199969196153586 DFEDPYNGPGS(ph)SLRK ddPTM_A549_MK2206_60min_R1 1 DFEDPYNGPGSSLRK 15 1 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 DFEDPY(0.023)NGPGS(0.489)S(0.489)LRK 52.784 0.020583 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DFEDPYNGPGS(ph)SLRK ddPTM_A549_PD325901_60min_R1 2 DFEDPYNGPGSSLRK 15 1 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 DFEDPYNGPGS(0.5)S(0.5)LRK;DFEDPYNGPGS(0.5)S(0.5)LRK 107.75 1.6884e-06 15032800.0 5283.7 6032.7 6314.1 6455.9 7123.700000000001 6357.1 6504.4 6628.3 6289.799999999999 7093.299999999999 8540.8 True False 5820.097334345643 6541.096800762488 6742.612795767763 6854.6662805873 6623.355887430856 6305.329885289785 6751.928501344253 6496.093356699241 6025.461579368694 6645.427827449848 7490.335744591968 0.7770142130875455 0.8732715092891754 0.9001749755524561 0.9151347168298001 0.884253538596441 0.8417953614218483 0.9014186722162827 0.8672633081086423 0.8044314413701796 0.8872002609826743 1.0 12.870814671730878 -10.952496586236174 1.1993137420622706 1.0004396341908262 0.861234098997846 0.16536624127895116 0.051150599840566774 0.2682986294051521 0.6824620578515355 0.030836162252417913 0.007088906237125494 1.1155869203669559e-11 10.952496586236174 -0.13920553519298018 DFLAGGVAAAISK ddPTM_A549_MK2206_60min_R1 2 DFLAGGVAAAISK 13 0 P05141 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed 0 ; 171.05 3.0197e-21 6379300.0 3707.7 3598.3 3578.8 3465.1 4611.200000000001 3754.0 3851.1 3630.3 5319.0 4653.8 5113.3 False True 4333.469115438143 3781.4381004180495 4086.327654012293 4314.049655554249 3932.8985884197023 4151.245788296475 4550.795020554169 4144.906142327475 4114.254992697623 3602.5033477955308 3843.5264900992584 1.127472160423755 0.9838459836712078 1.0631714558331986 1.1224196494201446 1.023252629727065 1.0800617086911948 1.1840155212346788 1.0784122739896698 1.0704375274362614 0.9372911457942096 1.0 11.90821489640757 -10.254038451546512 0.8493213789067433 1.0036044992615012 1.0800281627199757 0.35476211157736914 0.05441908842632068 0.6057434650229596 0.8460201348041336 0.02558214795264461 0.0097639634941071 5.5713641902742065e-11 10.254038451546512 0.07642366345847451 DFLAGGVAAAISK ddPTM_A549_PD325901_60min_R1 2 DFLAGGVAAAISK 13 0 P05141 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed 0 ; 169.23 3.5803000000000005e-21 11482100.0 7921.400000000001 9057.5 10778.0 9831.9 11131.3 10755.7 9489.3 10805.7 11630.3 10879.4 10735.7 False True 8725.574696573534 9820.807312299014 11509.459893379095 10439.19413313501 10349.475888900297 10668.10914524097 9850.420504244206 10590.171836592337 11141.518936457705 10192.472827309983 9415.276959209441 0.9267464711209283 1.0430715267162596 1.2224239332780598 1.108750616509909 1.0992216090655815 1.1330637634409773 1.0462167546339818 1.1247860134622685 1.183344790039316 1.0825462566282065 1.0 13.200787818354602 -5.3714576486248955 3.874685158292922 1.1009802093610577 0.9260132277759962 0.4552365503770175 0.05830427829855973 0.20544374173912927 4.86167796796254 0.010191091696695045 0.07837646688504242 4.251501644259572e-06 5.3714576486248955 -0.17496698158506152 DFLLKPELLR ddPTM_A549_MK2206_60min_R1 2 DFLLKPELLR 10 1 Q13838-2;Q5STU3;F6S4E6;A0A0A0MT12;F6TRA5;K7EQN7;F6WLT2;O00148;Q13838;O00148-3;O00148-2;F6R6M7;A0A0G2JHN7;K7ENP6;F6QYI9;K7EPJ3;F6SXL5;F6S2B7;A0A0G2JJL7;K7EN69;K7EIL8;F6U6E2;K7EL56 Q13838-2 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 ; 93.258 0.00060938 5431700.0 1267.8200000000002 1138.45 1153.73 1029.36 1919.15 1449.24 1244.9299999999998 1354.73 1843.08 1987.38 1948.3200000000002 False True 1481.797020776974 1196.3922422868936 1317.3462625079915 1281.5532462097256 1636.8455772826314 1602.5976148723457 1471.1176663650654 1546.7671261866233 1425.6253227939699 1538.4294777046453 1464.498373103511 1.0118119951453441 0.8169297175465912 0.8995204683746556 0.8750800067424487 1.117683438469029 1.0942979823707006 1.0045198365413865 1.0561753803172695 0.9734564059452229 1.0504822032983636 1.0 10.51619087520487 -6.725906659127862 24.999932520141233 1.0095238599336864 0.8947482516826681 0.4941000776958785 0.06347870188385034 134.27417290907167 94471.31765396858 0.009089084856196224 0.018919900264480444 1.8797207729439718e-07 6.725906659127862 -0.11477560825101829 DFLLKPELLR ddPTM_A549_PD325901_60min_R1 2 DFLLKPELLR 10 1 Q13838-2;Q5STU3;F6S4E6;A0A0A0MT12;F6TRA5;K7EQN7;F6WLT2;O00148;Q13838;O00148-3;O00148-2;F6R6M7;A0A0G2JHN7;K7ENP6;F6QYI9;K7EPJ3;F6SXL5;F6S2B7;A0A0G2JJL7;K7EN69;K7EIL8;F6U6E2;K7EL56 Q13838-2 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 ; 110.86 0.00017778 11383600.0 2343.0 1931.69 2537.16 2599.3 2839.5 2760.8 3090.0 2579.0 2960.2 2509.2 3071.0 False True 2580.859635174563 2094.480295566646 2709.346934782491 2759.8528575613896 2640.0633157432108 2738.3169601403238 3207.5916409128786 2527.5598218136392 2835.7930883727945 2350.7686837772494 2693.2864686729517 0.9582566374553599 0.7776671066849594 1.0059631481078404 1.0247156734579508 0.9802385845141957 1.0167195328054204 1.1909582134028756 0.9384667584429034 1.0529117943291266 0.8728253422427548 1.0 11.39515197345215 -5.881796545569615 7.260914272037332 1.0269112193968584 0.8690491355677734 0.27758547908740994 0.08450209080898005 0.13291466999312024 7.852332729008659 0.008880495245921311 0.027981995213256037 1.312814770813447e-06 5.881796545569615 -0.15786208382908495 DFNFKT(ph)PENDKR ddPTM_A549_PD325901_60min_R1 2 DFNFKTPENDKR 12 2 Q8NEM0-2;Q8NEM0-3;Q8NEM0 Q8NEM0-2 MCPH1 Microcephalin 1 DFNFKT(1)PENDKR;DFNFKT(1)PENDKR 76.82 0.00038844 24004000.0 4310.9 4668.2 4478.9 3973.2 5286.299999999999 5026.9 4839.7 5182.1 5476.4 5480.0 5877.6 True False 4748.539394483149 5061.6055970493235 4782.865087813659 4218.615540208096 4915.008524744966 4985.96259306338 5023.8774318854585 5078.738950221197 5246.245952694 5133.991864777349 5154.692461176208 0.9212071195804411 0.9819413350402589 0.9278662352481636 0.8184029545858656 0.9535017970060332 0.9672667439651043 0.9746221466603461 0.9852651711955519 1.0177611937486764 0.9959841258125931 1.0 12.331670640874046 -7.657786411214432 1.3392858230594007 1.0068962645467194 0.9189895755222652 0.46746545744972656 0.038251432178156165 0.25893829673269236 0.939914925609138 0.006581763297263105 0.011077392955574831 2.1989410600803557e-08 7.657786411214432 -0.0879066890244542 DFQDYMEPEEGCQGS(ph)PQR ddPTM_A549_MK2206_60min_R1 4 DFQDYMEPEEGCQGSPQR 18 0 O43237;O43237-2;H3BUM4;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR 207.76 1.7519000000000004e-51 115317000.0 7796.0 8850.2 8225.599999999999 6968.2 10422.9 8906.400000000001 8630.9 8522.3 11960.5 11149.900000000001 11095.0 True False 9111.774206099668 9300.63737773944 9392.113767420222 8675.409312814385 8889.705217132137 9848.869336410167 10199.022809820823 9730.362123449146 9251.465846993773 8631.129846058138 8339.805293577772 1.0925643807435608 1.1152103736644277 1.126179021787571 1.040241229551852 1.0659367819987149 1.180947155204508 1.2229329643552682 1.166737325503534 1.109314369019867 1.0349318170179231 1.0 13.025797986645118 -10.239958481301338 0.8991469086275419 1.007137622608517 1.124587129834237 0.39847580299703744 0.050082340922767664 0.4002648805275915 0.6329731649338787 0.02615776203440847 0.010597931280393673 5.754949522185494e-11 10.239958481301338 0.11744950722572 DFQDYMEPEEGCQGS(ph)PQR ddPTM_A549_PD325901_60min_R1 4 DFQDYMEPEEGCQGSPQR 18 0 O43237;O43237-2;H3BUM4;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR 191.61 1.0401e-40 164921000.0 13228.5 14276.400000000001 13772.699999999999 13395.6 13892.1 13462.9 12840.1 14815.8 13612.8 14332.8 16619.4 True False 14571.447581693008 15479.522331030168 14707.398243973115 14223.015788385073 12916.366821143247 13353.262606010267 13328.737031872313 14520.287246229742 13040.701355787174 13427.824561949055 14575.31915905675 0.9997343744365738 1.062036595021082 1.0090618314065731 0.9758287714438991 0.8861807196254313 0.916155760315744 0.9144730819558184 0.9962243082140118 0.8947112041580234 0.9212713914127453 1.0 13.831239854340375 -6.311182191129273 3.004967860968243 0.9434989096247303 1.0300650529432984 0.5060172136665895 0.03834681969063458 0.20756490248100026 3.711123095044105 0.006618230140506903 0.01781744464365667 4.884474075016972e-07 6.311182191129273 0.08656614331856816 DFQDYMEPEEGCQGS(ph)PQRR ddPTM_A549_MK2206_60min_R1 6 DFQDYMEPEEGCQGSPQRR 19 1 O43237;O43237-2;H3BUM4;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR 196.78 4.9997e-55 463720200.0 15467.800000000001 17872.9 14936.899999999998 13786.7 19960.899999999998 16511.600000000002 15584.199999999999 15618.300000000001 21174.0 22647.9 22244.7 True False 18078.386488597807 18782.55426867181 17055.177024482 17164.442118908486 17024.67805204433 18258.84655248697 18415.647414847776 17832.24185403773 16378.122807929942 17531.723660350333 16720.72706751236 1.0811961953331157 1.1233096618845895 1.0200021180669507 1.0265368275915614 1.0181780961620106 1.0919887920402165 1.101366426261964 1.0664752664185875 0.9795102056149172 1.048502471786272 1.0 14.029349961052496 -8.756797520193325 24.890893763705524 0.9903242617532083 1.0656180769171526 0.28405568962513683 0.03692630452220691 66.43700337808748 356253.17591325915 0.005917823112248837 0.0066014393500527105 1.7506627045791462e-09 8.756797520193325 0.07529381516394429 DFQDYMEPEEGCQGS(ph)PQRR ddPTM_A549_PD325901_60min_R1 6 DFQDYMEPEEGCQGSPQRR 19 1 O43237;O43237-2;H3BUM4;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDY(0.002)MEPEEGCQGS(0.998)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDY(0.003)MEPEEGCQGS(0.997)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR 164.05 1.516e-27 673360400.0 31070.199999999997 31950.100000000002 31610.8 30122.7 34678.0 30026.5 31891.199999999997 33819.4 29241.9 35513.8 37554.3 True False 34224.423831327666 34642.64705588572 33756.0989791824 31983.310765384686 32242.336912605406 29781.974139254347 33104.83706753424 33144.845536193934 28012.96463444646 33271.45260717698 32935.35917632191 1.039139231732821 1.0518375363822121 1.0249197161769696 0.9710934255843283 0.9789581082141429 0.9042553317792686 1.0051457732798668 1.0063605306002745 0.8505437722563449 1.0102046383965564 1.0 15.007349663059655 -6.351017114220775 0.9024451234360261 0.9377084123031482 1.0581533248449846 0.20856071171019264 0.05056555280831904 0.6789608097760671 0.9031351455407686 0.00985575830053483 0.05524846950707821 4.456386867901955e-07 6.351017114220775 0.12044491254183642 DFQEYVEPGEDFPAS(ph)PQR ddPTM_A549_MK2206_60min_R1 3 DFQEYVEPGEDFPASPQR 18 0 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR 347.9 7.958299999999996e-220 83189700.0 12125.78 13835.310000000001 12328.050000000001 10459.319999999998 16695.18 2567.12 2888.7999999999997 13260.29 17262.31 16305.1 17647.829999999998 True False 14172.315217142039 14539.46818361305 14076.352865498558 13021.853869536719 14239.341137971216 2838.770934483656 3413.6575667671286 15139.976715434977 13352.424347244601 12621.766585616242 13265.38675567019 1.0683680376740006 1.0960455546008308 1.0611339966761035 0.9816414786376753 1.0734207302236942 0.21399835427114441 0.25733569850935456 1.1413143841406288 1.00656125548222 0.9514812359482216 1.0 13.695379117864151 DFQEYVEPGEDFPAS(ph)PQR ddPTM_A549_PD325901_60min_R1 3 DFQEYVEPGEDFPASPQR 18 0 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR 321.88 4.7992999999999994e-173 99101200.0 13585.599999999999 14340.740000000002 14910.2 14652.3 16256.740000000002 6102.2 6255.200000000001 14989.76 14481.6 16957.1 16941.2 True False 14964.800110809872 15549.2844886314 15922.095834316293 15557.33929321229 15114.9226651084 6052.505706377962 6493.245058976779 14690.777477560774 13872.988713120561 15886.425812083206 14857.539799115006 1.0072192511778602 1.0465584948025917 1.0716508957468651 1.0471006306265433 1.017323383916409 0.4073693079885596 0.4370336641712076 0.9887759128490328 0.9337339088902801 1.0692500930086344 1.0 13.858907625072055 -7.0282437732583745 24.97417183933658 0.8831449996991358 1.0437640036271398 0.18561282058477524 0.21095395810809103 1335.462880065111 1180863.4870656484 0.034471437373659396 0.059792437025566324 9.370358929119691e-08 7.0282437732583745 0.160619003928004 DFQEYVEPGEDFPAS(ph)PQRR ddPTM_A549_MK2206_60min_R1 5 DFQEYVEPGEDFPASPQRR 19 1 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR 285.78 3.128899999999999e-127 1023128100.0 30657.199999999997 35025.1 29535.4 28330.9 45179.2 34227.3 30950.8 33818.5 47493.8 47130.9 47310.399999999994 True False 35831.38586342214 36807.72798570221 33723.963840481345 35271.97177182243 38533.39952852432 37849.210167757075 36574.15972635556 38612.37593981259 36736.53013201398 36483.996956168376 35561.9219793855 1.0075773149773188 1.035032021245614 0.9483166815345475 0.9918466103229417 1.083557844563669 1.064318463712323 1.028464089976825 1.0857786584818272 1.033029940094615 1.0259287160383903 1.0 15.118045677710288 DFQEYVEPGEDFPAS(ph)PQRR ddPTM_A549_PD325901_60min_R1 7 DFQEYVEPGEDFPASPQRR 19 1 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR 244.77 7.392099999999999e-86 1427516400.0 64399.0 65486.00000000001 67383.1 70035.2 81585.9 72536.79999999999 73356.4 73286.59999999999 82451.0 83053.7 87012.4 True False 70936.7390719619 71004.73504313688 71956.12237349739 74361.11524252038 75855.5878400754 71946.08435029935 76148.01794416219 71824.8412707745 78985.87120107593 77809.67520796698 76310.42641704924 0.9295812171757599 0.930472261484743 0.9429395922943105 0.9744555067236088 0.9940396273703404 0.9428080503324928 0.9978717394134392 0.9412192362579621 1.0350600161687598 1.0196467096478283 1.0 16.21959256783479 -6.903960455243921 0.4030621787013403 1.0158947421050246 0.916080833314929 0.5173026737385948 0.02508193151930547 1.0602824031445917 0.2636728337444948 0.008521597320029798 0.04234169378995771 1.2474971001269267e-07 6.903960455243921 -0.09981390879009566 DFQHLIS(ph)SPLKK ddPTM_A549_PD325901_60min_R1 2 DFQHLISSPLKK 12 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.897)S(0.103)PLKK;DFQHLIS(0.906)S(0.094)PLKK 100.11 5.4348e-05 18624100.0 2051.7599999999998 2305.65 2585.06 2328.71 2789.8 2279.16 1978.9299999999998 2693.95 2418.71 2421.69 2734.09 True False 2260.0531647741195 2499.955217179379 2760.4977168285914 2472.5491278158647 2593.854072287517 2260.5992766130885 2054.2392640620465 2640.217053887109 2317.0600299905955 2268.7840801117995 2397.8142628244964 0.9425472188625229 1.042597525562537 1.151255858148443 1.0311679124401132 1.0817577126395503 0.9427749728831056 0.8567132558642232 1.1010932309565442 0.9663217313843246 0.9461884163785454 1.0 11.2275041950906 -7.256752951422011 24.76524862675281 0.9802779589878362 1.0540555545591777 0.23216385503587667 0.07155507934597925 441.6597917603869 2333926.6751093185 0.010149257401929112 0.017193445222403746 5.5366497217818715e-08 7.256752951422011 0.07377759557134145 DFQHLISS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 DFQHLISSPLK 11 0 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.221)S(0.779)PLK;DFQHLIS(0.193)S(0.807)PLK 49.31 0.021066 1950400.0 586.3 695.96 497.33 458.72 710.72 686.5 543.7 663.05 1039.0 795.39 746.0 True False 685.2531063412314 731.3813913144942 567.8588722951641 571.1064205927233 606.174029485091 759.1449743381806 642.4832522332067 757.0393680054631 803.668158942062 615.7108465776536 560.7476114474105 1.2220348198585196 1.304296935704534 1.0126817496902 1.018473211358983 1.081010453027923 1.3538086633640112 1.1457619062786892 1.3500536650550883 1.4332083499519885 1.098017778423293 1.0 9.131207759815982 -7.219809921026357 24.916014492730664 1.225884203220412 1.1250524089685123 0.11647330610305151 0.14013607216767018 1158.4694305650933 693366.0172067506 0.026967811942097523 0.04670918939908697 6.028233678636976e-08 7.219809921026357 -0.1008317942518997 DFQHLISS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 DFQHLISSPLK 11 0 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.193)S(0.807)PLK;DFQHLIS(0.195)S(0.805)PLK 49.298 0.008807500000000001 5063600.0 1684.22 1797.7399999999998 1991.5700000000002 2143.66 2335.9 1725.68 2079.72 1903.07 1827.6399999999999 1696.24 1665.65 True False 1855.2007745427672 1949.241858969079 2126.7299164833007 2276.0690095949085 2171.834442417525 1711.6266342273798 2158.8648826664503 1865.1117759204667 1750.830646589303 1589.1391169178714 1460.7856094253016 1.2700020883096155 1.3343791494057398 1.455880933356123 1.5581129735323402 1.4867578297625499 1.1717165223860355 1.4778793470698175 1.2767867946441738 1.1985541446277732 1.0878660815552985 1.0 10.512528742807008 -9.17269837797948 0.5776223209682646 1.018932479320163 1.4131682968232224 0.6074255368470363 0.10716297745110151 0.3054458783507627 0.2321206338520887 0.043514569010050116 0.03149961652753958 6.718953291933496e-10 9.17269837797948 0.39423581750305936 DFQHLISS(ph)PLKK ddPTM_A549_MK2206_60min_R1 2 DFQHLISSPLKK 12 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.173)S(0.827)PLKK;DFQHLIS(0.143)S(0.857)PLKK 82.55 0.00014107 11299100.0 1697.83 1633.54 1586.7 1698.0 2285.6 1789.71 1306.56 1977.04 2375.54 2403.2 2597.2 True False 1984.3821960418425 1716.680208586526 1811.7179190290892 2114.0100762261163 1949.3912677160115 1979.0959242866516 1543.9450396134237 2257.291474431069 1837.4839829578686 1860.315450905112 1952.243560926562 1.0164624106123454 0.8793371088245596 0.9280183862761584 1.0828618511220893 0.9985389665164541 1.0137546174552856 0.7908567714167006 1.156255049118834 0.9412165673046314 0.952911556805023 1.0 10.93091733870056 -6.3697747661829895 0.002672429428614521 1.8295691900527256 0.1099824835408841 0.0 0.09334240753490348 412720.415260265 237.29238062913115 75294.56632145742 77400.09086096256 4.268008088619807e-07 6.3697747661829895 -1.7195867065118415 DFS(ph)PEALKK ddPTM_A549_PD325901_60min_R1 2 DFSPEALKK 9 1 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RJT0 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 DFS(1)PEALKK;DFS(1)PEALKK 43.897 0.026338 25451000.0 3654.8 3791.6 3570.3 3594.3 4668.6 4041.5 3854.6000000000004 4235.4 4752.799999999999 4203.8 4503.7 True False 4025.8326054784443 4111.131438621359 3812.602027958007 3816.311747752432 4340.693641795651 4008.587363955054 4001.288912318055 4150.921624392975 4553.056344307214 3938.3713505750025 3949.773451306535 1.0192565865130188 1.0408524664272703 0.9652710655333526 0.966210288969876 1.0989728133292822 1.0148904521673423 1.0130426369123726 1.0509265089672175 1.1527386065145384 0.997113226651579 1.0 11.947554191103785 -8.434789962995888 5.1105697187104315 1.0734598522818846 1.017413715684153 0.03462577346456397 0.052360073203495575 0.33822370550484226 14.707746648367742 0.010460529422188863 0.01262013735967656 3.6745997148980283e-09 8.434789962995888 -0.05604613659773161 DFS(ph)PLQTQTFNR ddPTM_A549_MK2206_60min_R1 2 DFSPLQTQTFNR 12 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 DFS(0.963)PLQT(0.037)QTFNR;DFS(1)PLQTQTFNR 160.48 5.6147e-14 13057000.0 5182.3 5970.6 5357.6 6029.0 8737.7 6369.3 6285.4 6343.299999999999 9019.099999999999 8004.700000000001 9394.099999999999 True False 6056.945544929493 6274.478037505488 6117.388241627433 7506.105270652092 7452.395904761202 7043.295098400839 7427.37582046459 7242.482200541513 6976.288250543165 6196.432710494405 7061.285706029653 0.8577680888563182 0.8885744464563574 0.8663278185166444 1.0629941321086338 1.0553879583710342 0.9974522192731203 1.0518446823532903 1.0256605527739993 0.9879628924497549 0.8775218803571782 1.0 12.785715175359114 -6.248678156398259 24.98346873183385 1.0088160018664896 0.8726585353856604 0.6129954998649227 0.04827421847656151 253.969789921003 497212.0642403095 0.00436339980417665 0.011456598035795124 5.640555068782438e-07 6.248678156398259 -0.13615746648082916 DFS(ph)PLQTQTFNR ddPTM_A549_PD325901_60min_R1 2 DFSPLQTQTFNR 12 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 DFS(1)PLQTQTFNR;DFS(1)PLQTQTFNR 187.77 2.1384e-19 17423500.0 8167.200000000001 8556.599999999999 8794.7 8466.9 9692.5 9625.8 8267.2 8572.3 9068.9 8779.1 9733.5 True False 8996.328131625132 9277.69471139031 9391.561228827348 8989.881183274923 9011.732237309761 9547.410676223823 8581.812819985422 8401.31875166074 8687.76567094927 8224.786127749425 8536.341205740202 1.0538857239651591 1.0868467517619365 1.1001857824652157 1.053130488414608 1.0556902565293298 1.11844295420194 1.0053268271674336 0.9841826315484358 1.0177388018542701 0.9635025041195314 1.0 13.059402127880565 -7.783770334115933 24.99618074453439 1.0061820202334542 1.0772908671240415 0.7430201771781839 0.024092853946785796 85.10791089324131 95265.27245914846 0.003122171345668786 0.004315725330811508 1.6452415384576484e-08 7.783770334115933 0.07110884689058738 DFSASYFSGEQEVT(ph)PSR ddPTM_A549_MK2206_60min_R1 2 DFSASYFSGEQEVTPSR 17 0 P49454 P49454 CENPF Centromere protein F 1 DFSASYFSGEQEVT(0.986)PS(0.014)R;DFSASYFSGEQEVT(1)PSR 224.67 1.5860999999999997e-63 11952600.0 4629.0 4835.2 4574.5 4671.3 6067.4 4580.0 4177.9 4645.9 7166.6 7084.6 7631.700000000001 True False 5410.2620318157215 5081.291027190992 5223.232886240979 5815.768709702624 5174.8934974361755 5064.652560042055 4936.9703503864475 5304.47055247203 5543.376542708551 5484.18393953161 5736.538265795178 0.9431231486897039 0.8857765418368813 0.9105200112383376 1.013811542821891 0.9020934329492964 0.8828761049570043 0.8606183941670444 0.9246814553823506 0.9663278245281867 0.9560093013292944 1.0 12.485964684740923 -8.9052442284089 2.212979046384433 0.9870458429102968 0.9138235257951924 0.30518275396905936 0.039134993586195876 0.21714342410444543 2.088338159914691 0.007589746797590157 0.007831965390827735 1.2438149473980585e-09 8.9052442284089 -0.07322231711510441 DFSASYFSGEQEVT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 DFSASYFSGEQEVTPSR 17 0 P49454 P49454 CENPF Centromere protein F 1 DFSASYFSGEQEVT(1)PSR;DFSASYFSGEQEVT(0.99)PS(0.01)R 248.97 6.8932e-86 20309500.0 4764.9 5064.1 4205.0 4458.7 6061.3 5164.6 4752.7 5606.1 4257.299999999999 4921.0 5781.0 True False 5248.629140266014 5490.8694794604935 4490.3765867191605 4734.103772557595 5635.575198349824 5122.54120991767 4933.566599277233 5494.281937599629 4078.3804861595477 4610.287220176888 5069.973648778357 1.0352379526727333 1.083017360609666 0.8856804586747993 0.9337531317738325 1.1115590708657337 1.0103684091438976 0.9730951166710715 1.083690432774441 0.8044184780215298 0.9093315941174106 1.0 12.307762533493152 -8.750716378340504 24.998325022727354 0.9076420536123002 1.0115559693354852 0.2929510325440109 0.07594144591338496 245.07603142980167 571340.7582454379 0.015603141158546217 0.017605137322430305 1.7753485168249107e-09 8.750716378340504 0.10391391572318498 DFSLEQLR ddPTM_A549_PD325901_60min_R1 1 DFSLEQLR 8 0 O15173;O15173-2 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 0 75.109 0.013574000000000001 1238200.0 802.47 828.07 874.85 938.25 875.96 1037.6 881.14 1065.9 655.22 996.57 1196.9 False True 883.9361636528092 897.8543650119176 934.2225819004177 996.2035715796461 814.4355914979476 1029.150129615184 914.672264878309 1044.6397883176269 627.6833819889272 933.6464001242997 1049.6888877742279 0.8420934754554918 0.8553528340342234 0.8899994967855226 0.9490465062386317 0.7758828363181838 0.9804334804357179 0.8713746287414649 0.9951899086334932 0.5979708743224614 0.8894505895970891 1.0 10.035746082483502 DFT(ph)PNR ddPTM_A549_MK2206_60min_R1 2 DFTPNR 6 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 DFT(1)PNR;DFT(1)PNR 85.212 0.042444 20151000.0 4013.0 4208.1 3505.8 3862.1 4644.8 4031.3 3563.7999999999997 4332.0 5509.4 5098.6 5335.0 True False 4690.296291569776 4422.274315751659 4002.975156319518 4808.314673376257 3961.556072929354 4457.889490239635 4211.296329425604 4946.0742661935965 4261.52969670394 3946.8227188685128 4010.1722614905298 1.169599704384383 1.1027641775438235 0.9982052877777533 1.1990294580485348 0.9878767829930812 1.1116453856729571 1.0501534734221913 1.2333819955044036 1.0626799595686156 0.9842027876881102 1.0 11.969448495272532 -9.576745684784454 1.4210291123602343 1.0150492741502029 1.1002894968328085 0.23555412503234308 0.07416655770191462 0.4041105639217758 1.6613080603688104 0.017061667897251085 0.013042300899150209 2.6500515079214316e-10 9.576745684784454 0.08524022268260567 DFT(ph)PNR ddPTM_A549_PD325901_60min_R1 2 DFTPNR 6 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 DFT(1)PNR;DFT(1)PNR 75.21300000000001 0.048669 18856800.0 5266.1 4912.799999999999 4928.7 4736.6 5786.700000000001 4679.6 4262.8 4057.6000000000004 5291.5 5508.1 4529.0 True False 5800.7105953020755 5326.818897473102 5263.191220680786 5029.169024400903 5380.2621550312515 4641.490889116438 4425.023186693663 3976.667984874381 5069.116656686925 5160.3176259817765 3971.961711696449 1.4604145297323514 1.3411052986203096 1.3250860916362772 1.266167548793645 1.3545604277069703 1.1685638548449222 1.1140649149922717 1.0011848737524516 1.276224954978701 1.2991861454217728 1.0 11.955636000526386 -2.0000000000000004 0.09313692103477492 0.9075263486404395 2.320536029015227 0.376516668494821 0.11170885314238585 70.98609916360137 0.458986485494213 0.8520595305732434 12.849644245523322 0.00999999999999999 2.0000000000000004 1.4130096803747874 DFT(ph)PVCTTELGR ddPTM_A549_MK2206_60min_R1 1 DFTPVCTTELGR 12 0 P30041 P30041 PRDX6 Peroxiredoxin-6 1 DFT(0.978)PVCT(0.02)T(0.002)ELGR 79.283 0.00097105 4976100.0 1038.0 1040.9 969.03 1171.1 1508.5 1341.8 1123.6 1402.9 1794.8 1371.9 1566.4 True False 1213.1890233365143 1093.877363956632 1106.4530251949059 1458.0195525726758 1286.6016482978669 1483.7883853852452 1327.7435758860229 1601.7653712010615 1388.280665706654 1061.9868371740693 1177.419649559282 1.0303794605352654 0.9290462957417769 0.9397269916542164 1.2383176661935484 1.0927298935256027 1.260203518720483 1.1276723438266112 1.3604031254282325 1.1790873935442634 0.9019611975828496 1.0 10.201412894277079 -6.241694335543202 24.555345624547652 1.130402887107394 0.9626504269473244 0.2970849959756081 0.1208392170137534 661.9908909770853 823263.8741255495 0.016420321203755615 0.0433754917328235 5.731993172878196e-07 6.241694335543202 -0.1677524601600695 DFTNEAPPAPLPDAS(ph)ASPLSPHRR ddPTM_A549_PD325901_60min_R1 1 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.333)AS(0.333)PLS(0.333)PHRR 71.528 2.1037e-05 266680000.0 389.23 316.9 293.35 507.12 645.84 621.62 464.27 667.09 706.09 882.4 712.31 True False 428.7443430640185 343.6062751606467 313.25849505685267 538.4436506469168 600.4784264270455 616.5577328174545 481.93804890829233 653.7843666280185 676.4154927941172 826.6851134086742 624.700385705122 0.6863199589353209 0.5500337169998796 0.5014539805402336 0.8619230321735049 0.9612262776967293 0.9869655068669814 0.7714707080968285 1.046556687955408 1.0827838565052628 1.323330563459737 1.0 9.287020610433226 -6.473807825430789 2.775721420182401 1.011532611717632 0.5762550788049908 0.6891664023127283 0.1300865037246511 0.08886037509092932 1.3496358649248876 0.013991103009763875 0.034952090525004066 3.3588621044029576e-07 6.473807825430789 -0.43527753291264115 DFTNEAPPAPLPDASAS(ph)PLSPHR ddPTM_A549_PD325901_60min_R1 1 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.273)AS(0.549)PLS(0.178)PHR 141.38 1.6867999999999997e-27 125840000.0 3881.3 3292.3 2963.4 3847.6 3838.1 3665.5 3831.4 3476.7 3818.7 3923.0 4335.5 True False 4275.326718737958 3569.7536753278555 3164.514144371834 4085.2575134663944 3568.5250967261886 3635.649383292651 3977.206023622529 3407.354491081613 3658.213318886963 3675.3011104966336 3802.2609849988876 1.1244169549658645 0.9388502497360527 0.8322716817327467 1.0744284859939959 0.938527131831597 0.9561809138395361 1.0460107918193555 0.896139035306807 0.9621152607145491 0.9666093740005879 1.0 11.892641845801952 -10.794780905184732 1.1794122225659092 0.9991452957121464 0.9699593717794995 0.0 0.0787249085166289 1.9640011978102236 5.061474928658294 0.04345131717885672 0.012276694253546994 1.604054407119087e-11 10.794780905184732 -0.02918592393264685 DFTNEAPPAPLPDASASPLS(ph)PHR ddPTM_A549_MK2206_60min_R1 2 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.003)AS(0.023)PLS(0.973)PHR;DFTNEAPPAPLPDAS(0.104)AS(0.436)PLS(0.46)PHR 146.5 1.0019999999999998e-27 160203000.0 5380.4 6314.299999999999 5675.0 5441.4 7920.3 5295.0 4946.5 5789.8 9090.8 8907.3 8667.4 True False 6288.479981849498 6635.670899444091 6479.800334335461 6774.543244273732 6755.234361957969 5855.3133854634625 5845.215021466906 6610.5218805188615 7031.74831502454 6895.1347436114775 6515.045371929339 0.9652242805466836 1.0185149174915156 0.9945902084203843 1.039830554897202 1.0368668176991531 0.8987371616307707 0.8971871549278141 1.014654772628429 1.0793091856768122 1.0583402493741314 1.0 12.66955951067415 -8.516145849629806 24.723281714142235 1.037953162993457 0.9804726743379902 0.26922954085340556 0.04839821202695817 340.7081028826261 1251089.4776563097 0.009248368111532266 0.010677423701512343 3.0468715833022016e-09 8.516145849629806 -0.057480488655466844 DFTNEAPPAPLPDASASPLS(ph)PHR ddPTM_A549_PD325901_60min_R1 1 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.077)AS(0.165)PLS(0.758)PHR 148.34 7.572e-28 122990000.0 1868.4 1984.0 2426.8 2132.9 2628.7 2301.0 2291.4 2775.7 2598.0 2549.7 2628.9 True False 2058.078592556616 2151.1986428486052 2591.497241533901 2264.6443888326417 2444.069180522688 2282.2614188941184 2378.6004809021915 2720.3364860054753 2488.8150947883646 2388.7115068654757 2305.561965970146 0.8926581123967351 0.9330474195012204 1.1240197746944693 0.9822526664902338 1.060075251325661 0.9898937667172076 1.0316792677924456 1.179901701258677 1.079483063792262 1.0360647608360167 1.0 11.170902725860403 -5.610959995960983 6.6096855474921465 1.0461774872406857 0.9025550423197706 0.4816183538490525 0.05648951534107834 0.1286839258158569 7.750074016109276 0.008021275173207732 0.03184215280137058 2.4492888420721367e-06 5.610959995960983 -0.14362244492091514 DFTNEAPPAPLPDASASPLS(ph)PHRR ddPTM_A549_MK2206_60min_R1 4 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.021)AS(0.272)PLS(0.707)PHRR;DFTNEAPPAPLPDAS(0.014)AS(0.065)PLS(0.921)PHRR;DFTNEAPPAPLPDAS(0.058)AS(0.153)PLS(0.788)PHRR;DFTNEAPPAPLPDAS(0.016)AS(0.141)PLS(0.843)PHRR 173.64 1.7099e-41 625890000.0 10863.1 12680.9 12645.599999999999 11043.8 17341.5 10537.8 10671.4 10028.9 18694.5 18249.3 20455.4 True False 12696.525702704126 13326.303645496833 14438.936230462112 13749.531495775016 14790.58832214614 11652.903001574483 12610.255247161005 11450.52728721814 14460.225598982079 14126.770455310707 15375.759639680115 0.8257494914227387 0.8667086347464573 0.9390714064754011 0.8942342894260454 0.9619419572595408 0.7578749456711016 0.8201386820991796 0.7447129478837484 0.9404560124408212 0.9187689445179573 1.0 13.9083700681364 -8.96352472225061 10.73969686591344 0.9738010823666241 0.854854824929386 0.31940812368652627 0.06575186313430152 0.3623987451366944 104.492023932893 0.011846884391568308 0.012463040439426901 1.0876152232789634e-09 8.96352472225061 -0.11894625743723808 DFTNEAPPAPLPDASASPLS(ph)PHRR ddPTM_A549_PD325901_60min_R1 5 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.276)AS(0.218)PLS(0.506)PHRR;DFTNEAPPAPLPDAS(0.204)AS(0.204)PLS(0.592)PHRR;DFTNEAPPAPLPDAS(0.136)AS(0.079)PLS(0.785)PHRR;DFTNEAPPAPLPDAS(0.28)AS(0.351)PLS(0.368)PHRR;DFTNEAPPAPLPDAS(0.015)AS(0.181)PLS(0.804)PHRR 143.47 2.5048e-28 691517000.0 12576.74 13494.330000000002 13690.380000000001 12905.89 15279.84 16218.660000000002 13967.050000000001 16943.16 14096.65 16557.079999999998 17429.12 True False 13853.521386293356 14631.544547455253 14619.491513742747 13703.057513897187 14206.636750986352 16086.580610239589 14498.57373081303 16605.21538214812 13504.216822920873 15511.663143151056 15285.448732294737 0.9063208826198188 0.9572204783587458 0.956431948435706 0.8964772807059102 0.9294222891193834 1.052411407213204 0.9485213018431565 1.0863413742682615 0.8834687852107005 1.014799330711069 1.0 13.8998712853467 -5.26130934379568 19.15740591681402 0.9570706326813861 0.9063216120752366 0.03762386132958717 0.060979176631260366 1.1498704446833221 162601.4349862172 0.008558776648702025 0.06833202108317854 5.478865715485567e-06 5.26130934379568 -0.0507490206061495 DFTPAELR ddPTM_A549_MK2206_60min_R1 1 DFTPAELR 8 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 0 68.915 0.020258 1098600.0 731.62 635.81 664.81 660.43 827.95 522.04 599.64 438.02 1033.2 784.15 874.12 False True 855.0995696083431 668.1700132359166 759.0900546730497 822.2353796478292 706.1596517787331 577.2819262978936 708.5868261341182 500.11067637999076 799.1818496813653 607.0099703841727 657.0518795152958 1.3014186493753677 1.0169212417881257 1.1552969839048737 1.2514010008682852 1.0747395659223498 0.8785941328160447 1.0784336035334674 0.7611433616915001 1.2163146847261408 0.9238387246254606 1.0 9.35986347716328 -5.251859887036896 23.309243452640136 1.0741072291032123 1.3014189718021156 0.17959971464707258 0.1432675320789921 685.2205234435697 1667214.702706512 0.019448332104160963 0.32606424713949966 5.599382207576239e-06 5.251859887036896 0.2273117426989033 DFVAPHLAQPT(ph)GSQSPPPGSK ddPTM_A549_MK2206_60min_R1 1 DFVAPHLAQPTGSQSPPPGSK 21 0 Q969Z0-2;Q969Z0;H7C4R5 Q969Z0-2 TBRG4 Protein TBRG4 1 DFVAPHLAQPT(0.46)GS(0.298)QS(0.242)PPPGSK 70.569 0.00061278 3810900.0 1144.1 1329.3 1658.6 1637.9 2029.2 1609.2 1465.7 1465.6 2081.0 1717.1 1969.5 True False 1337.1961094405638 1396.9556921006347 1893.8144201812868 2039.1855735281254 1730.7073680649846 1779.484475899492 1731.9987176718985 1673.353288211759 1609.6568226741397 1329.2059174222572 1480.4187945652477 0.903255291238893 0.9436219651013527 1.2792423516464746 1.3774383174640592 1.1690660605083973 1.2020142424779676 1.1699383471962284 1.1303242665891513 1.0872982892295995 0.8978580401045253 1.0 10.531789641174788 -9.337664547859305 0.8942818793988417 1.0177381921445103 1.1569291617425186 0.2129343392730143 0.1321159524611885 0.7004450939901314 1.1916968998424478 0.03921966268669554 0.02984137533553679 4.5955283765860103e-10 9.337664547859305 0.13919096959800825 DFVNYLVR ddPTM_A549_PD325901_60min_R1 1 DFVNYLVR 8 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 79.906 0.0111 2176200.0 1785.6 1690.0 1714.9 1983.8 2629.7 2208.5 1658.2 2114.0 2448.2 2208.1 2284.3 False True 1966.8727975107556 1832.4222310555162 1831.2834265314357 2106.3348204633094 2444.998943972503 2190.5147082258413 1721.303708401857 2071.834611599081 2345.3106678448335 2068.680189163297 2003.3455813707676 0.981794062792174 0.9146810455945904 0.9141125942326934 1.0514086236794316 1.2204579013769252 1.0934282774752249 0.8592145680747071 1.0341873268722068 1.1706970028805914 1.0326127495925217 1.0 10.96819559524121 -6.3190296511065505 5.743837288171134 1.0728093419669373 0.9347307384239157 0.253467632768673 0.09001663091781278 0.21646689010933923 15.470153770265071 0.014305565251267735 0.03401839232220024 4.797006963393019e-07 6.3190296511065505 -0.1380786035430216 DGAGLGLSGGS(ph)PGASTPVLLTR ddPTM_A549_PD325901_60min_R1 2 DGAGLGLSGGSPGASTPVLLTR 22 0 Q8N612;Q8N612-2 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 DGAGLGLSGGS(0.986)PGAS(0.012)T(0.002)PVLLTR;DGAGLGLS(0.043)GGS(0.885)PGAS(0.036)T(0.036)PVLLT(0.001)R 127.5 1.2665e-21 4167700.0 2829.8999999999996 3101.5 2898.3 2824.7 3634.7 3222.7 3374.1 3232.4 2960.4 3253.3999999999996 3012.2 True False 3117.189364737727 3362.8742897151947 3094.9960668937315 2999.175303640847 3379.411211034282 3196.45539968278 3502.5032218783635 3167.927246231257 2835.984683068313 3047.9797687712826 2641.7184959090396 1.1799854411304613 1.2729873735308799 1.1715843575636984 1.135312225085816 1.2792472840189566 1.20999092243659 1.325842714620174 1.1991918333225524 1.0735378078550435 1.153786739007725 1.0 11.367261024451308 -8.841073440128948 2.5372930778848497 1.0294831694101556 1.225549906628065 0.48212687370262286 0.06417623552612069 0.10360527432955571 1.2951884976429324 0.010055707032166851 0.010627761727795518 1.4418715073418078e-09 8.841073440128948 0.19606673721790946 DGAS(ph)TSLRR ddPTM_A549_PD325901_60min_R1 1 DGASTSLRR 9 1 Q6ZQQ2 Q6ZQQ2 SPATA31D1 Spermatogenesis-associated protein 31D1 1 DGAS(0.499)T(0.499)S(0.002)LRR 47.559 0.014288999999999998 3526300.0 655.31 659.6 523.42 454.97 731.46 437.99 454.18 540.33 583.52 900.37 857.75 True False 721.836588786275 715.1868068664011 558.9424287801528 483.0724635881604 680.0847730000097 434.4231546551217 471.46406843683206 529.5526942693149 558.9966836454608 843.5204845418949 752.2521877252442 0.9595672841697626 0.950727453553939 0.7430253283414887 0.642168240213347 0.904064865609147 0.5774966982399689 0.6267367195866921 0.7039563365985596 0.7430974515817974 1.1213267283311457 1.0 9.55507258703393 -10.580571421638624 0.917283358224212 0.9969474607236274 0.7570518041437226 0.4200484980207888 0.12983143409492456 0.5296989881157407 0.8107025915893091 0.0811638154056324 0.023562932462465803 2.626809500564141e-11 10.580571421638624 -0.23989565657990475 DGASS(ph)SPESASR ddPTM_A549_MK2206_60min_R1 1 DGASSSPESASR 12 0 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;G5E9M9;Q14135-5 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 DGAS(0.002)S(0.914)S(0.084)PESASR 176.99 4.3641e-16 39152000.0 1963.7 2718.2 2134.7 2072.1 2921.2 2426.1 2375.1 2314.2 2805.1 3507.7 3197.1 True False 2295.1245521444243 2856.544769629086 2437.432559243332 2579.7645930201024 2491.4953496902417 2682.8282916851585 2806.624926207629 2642.2449369402657 2169.749328824234 2715.3081337965473 2403.1718345288414 0.9550397184121457 1.1886560622033637 1.0142564606584645 1.0734832008073545 1.0367528921121518 1.1163697298454507 1.1678835803091407 1.0994823170679746 0.902868990743489 1.1298851354626094 1.0 11.230724094161662 -8.751382214977449 24.999346201544807 0.9541325783856182 1.0851058069825374 0.013622527047547517 0.08463267756697077 136.68901345320404 339771.0065071702 0.011347443955185796 0.012792887915764535 1.7726287346531575e-09 8.751382214977449 0.1309732285969193 DGASSS(ph)PESASR ddPTM_A549_MK2206_60min_R1 1 DGASSSPESASR 12 0 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;G5E9M9;Q14135-5 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 DGAS(0.026)S(0.237)S(0.735)PES(0.002)ASR 154.74 1.0117999999999999e-13 39401000.0 1257.1 1413.2 1435.4 1157.1 1332.0 1562.9 1295.4 915.79 1659.6 1689.9 1958.8 True False 1469.2677468558102 1485.1258437347603 1638.9613039480387 1440.5895519441933 1136.0645644897297 1728.2850406309428 1530.757412070803 1045.6060369892507 1283.7032498366173 1308.1504163134784 1472.375899870226 0.9978890220801021 1.0086594353151652 1.1131405397850476 0.9784115266157003 0.7715859547754493 1.173806933938047 1.0396512277915733 0.7101488397639554 0.8718583684708244 0.8884622577894529 1.0 10.52393032538215 DGASSS(ph)PESASR ddPTM_A549_PD325901_60min_R1 2 DGASSSPESASR 12 0 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;G5E9M9;Q14135-5 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 DGASS(0.161)S(0.818)PES(0.021)ASR;DGASS(0.204)S(0.795)PESASR 168.82 1.3517e-15 111556000.0 2472.1 3069.3 2543.2200000000003 2415.8199999999997 3138.7 2709.27 2465.67 2917.9 2924.6000000000004 2795.4 2725.57 True False 2723.0657721361667 3327.960682709286 2715.8182028242313 2565.0397146747005 2918.248539927173 2687.2066033756064 2559.5024211163936 2859.700195451733 2801.6892325704594 2618.897966934053 2390.3421688117664 1.139194968680905 1.3922528440200708 1.1361629469868986 1.0730847441601952 1.2208497084657246 1.1241932801241634 1.0707682165807737 1.1963559998915483 1.1720871049868031 1.0956163519618203 1.0 11.223001434213062 -14.99999999999931 0.17468717110135798 0.29815925214760014 1.2137878441574335 0.2171222665603998 0.0864005731566263 40.63429753607878 0.4433516975581667 9.783168529570892 0.10130478254539334 1.000000000001587e-15 14.99999999999931 0.9156285920098333 DGDGVPGGGPLS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 DGDGVPGGGPLSPAR 15 0 M0QZR4;Q92888-2;Q92888;Q92888-3 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 DGDGVPGGGPLS(1)PAR;DGDGVPGGGPLS(1)PAR 101.72 6.9437e-06 39527000.0 2391.5 2416.3 1955.89 2230.59 2814.1000000000004 2374.17 1941.08 2692.1 3060.3 3078.7 3084.54 True False 2795.126733438607 2539.2793491482466 2233.264612497512 2777.0846501349915 2400.149617815728 2625.4030935535015 2293.7491102535087 3073.713419210477 2367.146936294892 2383.219531749989 2318.563589026805 1.205542408527098 1.095195042812729 0.9632104217745021 1.1977608305755576 1.0351881782216583 1.1323403446767184 0.9892974775888239 1.3256972695325724 1.020954071519979 1.0278862063689713 1.0 11.179015579334667 -8.96433100957897 24.99992242331794 1.0092441737646098 1.1122605964816465 0.17391857253569765 0.09815129800640193 192.82934072416361 135152.37165122965 0.015672290399443053 0.016625332825173887 1.0855978896901944e-09 8.96433100957897 0.1030164227170367 DGDGVPGGGPLS(ph)PAR ddPTM_A549_PD325901_60min_R1 3 DGDGVPGGGPLSPAR 15 0 M0QZR4;Q92888-2;Q92888;Q92888-3 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 DGDGVPGGGPLS(1)PAR;DGDGVPGGGPLS(1)PAR;DGDGVPGGGPLS(1)PAR 115.24 1.0392e-06 51216000.0 8127.75 9958.75 8689.38 10959.46 10133.060000000001 10402.72 9752.93 11071.550000000001 10126.54 12262.04 11525.75 True False 8952.873196666693 10798.008812736163 9279.093580286732 11636.400953460447 9421.34882275925 10318.003697330816 10124.083088158073 10850.719249787051 9700.956739791443 11487.812701747163 10108.155817749035 0.8857078737296701 1.0682471666865094 0.9179808609591729 1.1511893131908342 0.932054174136907 1.0207602537362261 1.0015756850899618 1.0734618109798169 0.9597157893784556 1.1364894753180963 1.0 13.303232188335473 DGDILGK ddPTM_A549_MK2206_60min_R1 2 DGDILGK 7 0 P61604;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 ; 91.626 0.034289 19270400.0 5253.6 6433.9 5253.8 4862.6 6748.4 5284.0 5089.1 5289.0 7426.5 8140.7 7893.6 False True 6140.27924181186 6761.358028591194 5998.867840798532 6053.937218290412 5755.719299551424 5843.149372764676 6013.7235956226095 6038.731946883182 5744.409607683564 6301.710216038308 5933.401267722895 1.0348666750746085 1.1395416766050024 1.011033565761306 1.0203148152516197 0.9700539437408283 0.98478918062576 1.0135373159972612 1.0177521584008276 0.9681478377221129 1.0620738311293687 1.0 12.53464363822994 -5.913861334082719 6.345824013129062 0.9906989161121148 1.086635101319492 0.40624591829446255 0.035411530470706304 0.08906308867870293 5.313059200196955 0.003729529800851705 0.011838592824090093 1.219378872346422e-06 5.913861334082719 0.09593618520737712 DGDILGK ddPTM_A549_PD325901_60min_R1 2 DGDILGK 7 0 P61604;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 ; 89.55 0.035019 38086000.0 7774.700000000001 8701.7 7758.2 7629.700000000001 8550.4 7913.4 9061.3 9003.1 7509.9 9022.7 9569.0 False True 8563.981820568366 9435.022797618802 8284.718105846512 8100.969240694079 7949.849401278658 7848.955894079405 9406.132730033612 8823.526107704687 7194.28501938073 8453.005182176385 8392.073662888792 1.0204845863591239 1.1242778813229575 0.9872075053967859 0.9653119796264389 0.9473045305160123 0.9352820541588966 1.1208353391402135 1.0514118991500103 0.8572714335427141 1.0072606034855298 1.0 13.03481162613994 -8.742805286613365 24.99599634861405 0.9326003877037166 1.0178855559254638 0.12111629887400799 0.0702917482903709 292.01639545360723 391714.25321872835 0.013365734292241145 0.015142312898887787 1.8079845436023593e-09 8.742805286613365 0.08528516822174725 DGDKDVFASEVT(ph)PSDLQK ddPTM_A549_PD325901_60min_R1 1 DGDKDVFASEVTPSDLQK 18 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 DGDKDVFASEVT(0.744)PS(0.256)DLQK 105.92 6.976100000000001e-11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DGDKS(ph)PMSSLQISNEK ddPTM_A549_MK2206_60min_R1 5 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7-5;Q9UER7-4;Q9UER7-2;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.901)PMS(0.075)S(0.023)LQISNEK;DGDKS(0.818)PMS(0.139)S(0.043)LQISNEK;DGDKS(0.513)PMS(0.219)S(0.268)LQISNEK;DGDKS(0.833)PMS(0.135)S(0.032)LQISNEK;DGDKS(0.953)PMS(0.046)S(0.001)LQISNEK 144.57 6.846e-15 88521700.0 24101.800000000003 25981.1 24878.0 21704.1 31229.299999999996 25936.199999999997 23756.699999999997 25253.899999999998 34449.0 33512.799999999996 35951.3 True False 28169.59460756455 27303.42701574949 28406.074487682392 27021.605474334076 26635.51133920355 28680.751468943814 28072.98487829432 28833.717661825125 26646.356503748902 25942.235204349552 27023.600004596923 1.0424071775327006 1.0103549124137778 1.051158042705276 0.9999261930215624 0.9856388983952044 1.0613223798481697 1.0388321642386242 1.066982846731016 0.9860402203709406 0.9599844284231774 1.0 14.721932258610474 -8.797897607612633 24.999371002550955 0.9934078713301532 1.0305700474189565 0.4034214899835785 0.026085906184409192 143.9374013179692 98697.11143836216 0.004207222663322851 0.004478986006633971 1.5925841618762078e-09 8.797897607612633 0.037162176088803345 DGDKS(ph)PMSSLQISNEK ddPTM_A549_PD325901_60min_R1 3 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7-5;Q9UER7-4;Q9UER7-2;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.875)PMS(0.1)S(0.024)LQISNEK;DGDKS(0.986)PMS(0.01)S(0.003)LQISNEK;DGDKS(0.969)PMS(0.03)S(0.001)LQISNEK 235.68 1.0816999999999998e-65 127206000.0 28787.5 29202.600000000002 31966.1 33225.3 35005.1 32624.0 30258.8 32722.9 33519.1 33970.4 35694.2 True False 31709.985807762587 31663.605588533617 34135.511773774866 35277.55132086886 32546.462537039137 32358.32096045272 31410.31519225071 32070.21608888157 32110.408792810125 31825.50314657528 31304.039684176492 1.0129678510403657 1.011486246119822 1.0904506932065263 1.1269328711815072 1.0396888984743609 1.0336787611730873 1.0033949454813635 1.0244753205156574 1.0257592667517998 1.0166580245763737 1.0 14.934061223808548 -7.338339328054475 2.63005613100423 1.0132210788117475 1.0603507514553108 0.288837348797223 0.0314970920619536 0.27960585048314596 3.7842150247057917 0.005156383335797303 0.008838930039876272 4.5883936699267145e-08 7.338339328054475 0.04712967264356327 DGDKSPMS(ph)SLQISNEK ddPTM_A549_MK2206_60min_R1 1 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7-5;Q9UER7-4;Q9UER7-2;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.17)PMS(0.672)S(0.158)LQISNEK 62.055 0.00085312 14115000.0 2840.8 3168.9 2743.0 2264.1 3719.5 2971.8 2588.5 2946.8 4431.6 3503.4 4166.2 True False 3320.2575891082543 3330.1834745337383 3131.998646181879 2818.8046016393105 3172.366477191858 3286.2739034788156 3058.796943913287 3364.5179241965125 3427.8496758110136 2711.9795067830287 3131.617558729494 1.0602372501881399 1.0634068215803476 1.0001216902911159 0.900111379750632 1.0130120992420595 1.0493854507611289 0.9767466450003716 1.0743706283092584 1.0945939635112092 0.8659995851738954 1.0 11.612692322382562 -8.26609918944703 24.928610969514907 1.0481450802622758 1.0082731329505104 0.0 0.07295840257518495 701.0019248058477 3750150.4149235184 0.009204541858852949 0.01129332747344995 5.418771157923506e-09 8.26609918944703 -0.039871947311765465 DGDKSPMS(ph)SLQISNEK ddPTM_A549_PD325901_60min_R1 1 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7-5;Q9UER7-4;Q9UER7-2;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.397)PMS(0.522)S(0.08)LQIS(0.002)NEK 59.861999999999995 0.0010057 3987000.0 2635.1 2965.4 2206.0 3107.5 3438.3 3051.6 3058.0 2616.6 3453.8 3338.3 3936.6 True False 2902.613412141909 3215.3046650722044 2355.7124257556393 3299.4432173554483 3196.805669491065 3026.748781354754 3174.3738634018086 2564.409860317011 3308.648796913031 3127.519168282158 3452.423156163444 0.8407467105994854 0.9313182421836317 0.6823359475938225 0.9556891111291244 0.9259599779314313 0.8767027228256321 0.9194625686989593 0.742785500015806 0.958355522267385 0.9058910298115539 1.0 11.753393588079318 -8.971817203251124 21.721160591028028 0.9816278176473554 0.8630502279014354 0.19607654027232058 0.08216456039313366 35.08133683272876 27038.686358919054 0.01312379726192462 0.013739763227868476 1.0670451514371854e-09 8.971817203251124 -0.11857758974592003 DGDKSPMSS(ph)LQISNEK ddPTM_A549_PD325901_60min_R1 1 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7-5;Q9UER7-4;Q9UER7-2;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.222)PMS(0.339)S(0.438)LQIS(0.002)NEK 44.567 0.01175 4591200.0 2706.7 2599.2 2830.8 2703.0 3677.7 3235.7 2719.9 3002.8 3139.4 3114.4 3865.4 True False 2981.482191432775 2818.243705893193 3022.9151109832574 2869.958171041599 3419.3910393762303 3209.3495319929175 2823.4072828863905 2942.9067983489713 3007.461935557579 2917.756252493171 3389.9803047894566 0.8794983815158028 0.8313451561684595 0.8917205526865157 0.8466002492660043 1.008675783320989 0.9467162766281152 0.8328683440719121 0.8681191434036216 0.8871620673750095 0.8607000602248 1.0 11.727061176234585 -10.586892719567063 0.7616006968496194 1.004303580201393 0.888102838284737 0.0 0.06383107214624346 0.5982020991054956 0.5874538600192127 0.0415171612004539 0.009989490840168017 2.588852340499591e-11 10.586892719567063 -0.11620074191665608 DGDSYDPYDFS(ph)DT(ph)EEEMPQVHTPK ddPTM_A549_MK2206_60min_R1 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.001)Y(0.006)DPY(0.028)DFS(0.677)DT(0.708)EEEMPQVHT(0.58)PK 44.105 0.012339 3573300.0 190.17 469.16 239.64 324.98 417.82 459.94 248.38 514.87 343.38 433.67 499.49 True False 222.26604678988895 493.03824005561876 273.6245554396741 404.6001145889065 356.3592314828073 508.6105455165371 293.50743091720375 587.8543992232453 265.60497826518304 335.7036458031043 375.4528477773019 0.591994568973745 1.3131828483241712 0.7287854042379597 1.077632296529798 0.9491451019548002 1.3546589099737423 0.7817424548908903 1.565720975891834 0.7074256590077201 0.8941299760821773 1.0 8.552487924280442 DGDSYDPYDFS(ph)DTEEEMPQVHT(ph)PK ddPTM_A549_MK2206_60min_R1 3 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 DGDSYDPY(0.001)DFS(0.879)DT(0.159)EEEMPQVHT(0.96)PK;DGDSYDPY(0.002)DFS(0.831)DT(0.207)EEEMPQVHT(0.96)PK;DGDS(0.003)Y(0.001)DPY(0.008)DFS(0.852)DT(0.143)EEEMPQVHT(0.993)PK 74.83800000000001 9.3376e-06 24056000.0 3547.2999999999997 4536.4 4297.200000000001 3408.3700000000003 4754.3 4436.1 3390.8 4152.0 6102.6 5253.3 5530.8 True False 4145.997516841635 4767.283383468984 4906.607576512135 4243.4208030075415 4054.948767983129 4905.525157555139 4006.864468773878 4740.558714966721 4720.370843849691 4066.575881424697 4157.349717685441 0.9972693659146563 1.1467121380693268 1.180224881163915 1.0207033545809132 0.9753686948041209 1.1799645184255119 0.9638026004231985 1.1402838435266338 1.1354278962313773 0.9781654557771288 1.0 12.021448397731188 -11.022880812470122 1.337226189259017 1.0004080314898929 1.0889526744128513 0.16517257623935278 0.07810789791843678 0.6634423614156275 2.1292190248777776 0.05224559599544301 0.01202572319464328 9.486787824422414e-12 11.022880812470122 0.08854464292295838 DGDSYDPYDFS(ph)DTEEEMPQVHT(ph)PK ddPTM_A549_PD325901_60min_R1 5 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.002)YDPY(0.002)DFS(0.864)DT(0.138)EEEMPQVHT(0.993)PK;DGDSYDPYDFS(0.934)DT(0.066)EEEMPQVHT(1)PK;DGDSYDPYDFS(0.752)DT(0.248)EEEMPQVHT(1)PK;DGDSYDPYDFS(0.989)DT(0.011)EEEMPQVHT(1)PK;DGDSYDPYDFS(0.979)DT(0.021)EEEMPQVHT(1)PK 191.19 2.7576e-51 641325000.0 58020.16 54643.21 56551.47 54313.37 64924.770000000004 56840.22 60386.66 61067.18 63146.26 63485.33 66761.73999999999 True False 63910.32393101573 59248.18507706216 60389.39282581474 57668.183510286966 60364.67813349723 56377.33209363487 62684.7073911483 59849.14718862408 60492.44228923436 59476.855429325806 58550.46921753882 1.0915424724191853 1.0119164862185996 1.0314074956674313 0.9849311932245359 1.030985386457244 0.9628843773082354 1.0706098213875812 1.0221804878498948 1.0331675065571262 1.0158220117475931 1.0 15.837393111934418 -5.259361876986432 24.52132199870622 1.0163243685442174 1.0915425057331607 0.3958867808703248 0.026688222016063638 104.58152515190486 1234279.5615064611 0.0034202927024815054 0.030790940036480183 5.503489256478564e-06 5.259361876986432 0.07521813718894332 DGDSYDPYDFS(ph)DTEEEMPQVHTPK ddPTM_A549_MK2206_60min_R1 6 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 DGDSYDPYDFS(0.998)DT(0.002)EEEMPQVHTPK;DGDSYDPY(0.011)DFS(0.494)DT(0.494)EEEMPQVHTPK;DGDSYDPYDFS(0.982)DT(0.018)EEEMPQVHTPK;DGDSY(0.001)DPY(0.006)DFS(0.496)DT(0.496)EEEMPQVHTPK;DGDSYDPYDFS(0.571)DT(0.429)EEEMPQVHTPK;DGDSYDPYDFS(0.977)DT(0.023)EEEMPQVHTPK 277.1 3.0854999999999994e-140 897187100.0 31810.199999999997 37001.200000000004 30830.799999999996 29570.1 45193.600000000006 34054.799999999996 33379.2 34979.200000000004 52578.7 48476.2 50712.4 True False 37178.98407527859 38884.40303509666 35203.07103926517 36814.77582745225 38545.68130759993 37658.456332253285 39443.76857263684 39937.60871930728 40669.70840093067 37525.392751816944 38119.11148896201 0.9753371110458425 1.0200763217252913 0.9235018777774706 0.9657826321086354 1.0111904449494171 0.9879153752877448 1.0347504711398745 1.0477056562787894 1.0669112372335128 0.9844246438609414 1.0 15.218226871687982 -7.439095680344237 1.5267184764622417 1.0340000203145552 0.974361874480855 0.33563386676104057 0.03154936997410118 0.30347468426525803 1.3990584443086664 0.005377372843790305 0.009688561081783956 3.638348700599852e-08 7.439095680344237 -0.059638145833700196 DGDSYDPYDFS(ph)DTEEEMPQVHTPK ddPTM_A549_PD325901_60min_R1 5 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 DGDSYDPY(0.011)DFS(0.494)DT(0.494)EEEMPQVHTPK;DGDS(0.004)Y(0.004)DPY(0.02)DFS(0.484)DT(0.484)EEEMPQVHT(0.004)PK;DGDSYDPYDFS(0.993)DT(0.007)EEEMPQVHTPK;DGDSYDPYDFS(0.998)DT(0.002)EEEMPQVHTPK;DGDSYDPYDFS(0.988)DT(0.012)EEEMPQVHTPK 231.21 4.0154999999999996e-89 1737085000.0 23667.2 26815.300000000003 23862.100000000002 27326.3 29075.399999999998 28268.199999999997 28165.0 27052.4 28578.0 29808.200000000004 32411.3 True False 26069.87672112823 29075.119439303544 25481.525600464043 29014.183488469866 27033.244208684657 28037.993151491828 29236.83448747936 26512.818659802753 27376.96604267203 27926.105164900782 28424.915572158767 0.9171487829030803 1.022874434419838 0.8964503530635752 1.0207306830803138 0.9510404398584317 0.9863879131079666 1.02856363507077 0.9327316590439112 0.9631327126785499 0.9824516485900647 1.0 14.794868443572557 -6.729854578705988 0.003956327235092901 1.9355690610680838 2.3466166806746237e-06 0.05899766099067194 0.041394917522834564 41440.16427383957 41.37671083277686 9948.207380865551 10295.691915805888 1.862710751452295e-07 6.729854578705988 -1.935566714451403 DGDSYDPYDFSDT(ph)EEEMPQVHT(ph)PK ddPTM_A549_MK2206_60min_R1 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.004)Y(0.007)DPY(0.049)DFS(0.609)DT(0.661)EEEMPQVHT(0.67)PK 54.683 0.0011872999999999999 4910100.0 945.0 607.16 1037.3 798.8 1295.7 1228.3 808.42 895.71 1434.4 1359.0 1562.5 True False 1104.4928969682137 638.0618506099609 1184.4047377632019 994.5060358594945 1105.104246403411 1358.2778907204488 955.2994496420243 1022.6796354968303 1109.5106902661148 1052.0009561335085 1174.4881271938063 0.9404036289469936 0.5432680295666131 1.008443346799162 0.8467569938196469 0.9409241530979342 1.1564849905854473 0.8133751440506364 0.8707449754645961 0.9446759525079734 0.8957101666468478 1.0 10.197816413997558 -5.790685749540157 24.999029954632427 0.95904405836388 0.7418353926886433 0.27211087375924714 0.12363052965961176 139.83540879870992 119527.60975186173 0.015239790239224848 0.04739290941103482 1.6192512853274268e-06 5.790685749540157 -0.21720866567523667 DGDSYDPYDFSDT(ph)EEEMPQVHT(ph)PK ddPTM_A549_PD325901_60min_R1 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.003)Y(0.004)DPY(0.021)DFS(0.466)DT(0.519)EEEMPQVHT(0.986)PK 43.31 0.013182 9542300.0 267.86 536.01 428.43 349.54 219.8 309.09 435.61 379.35 606.13 296.6 414.33 True False 295.05295001189006 581.1814438272586 457.50583615887996 371.1302919370629 204.36200626883524 306.57287351846276 452.1873769249383 371.78356665568225 580.6564639738534 277.87262538192743 363.3700366542704 0.8119903135893924 1.5994203847364157 1.259063186308274 1.021356343396514 0.5624074239871246 0.8436933224908484 1.2444267036667458 1.0231541655962595 1.5979756320038048 0.7647097926412415 1.0 8.50529565020387 DGDSYDPYDFSDTEEEMPQVHT(ph)PK ddPTM_A549_MK2206_60min_R1 2 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 DGDSYDPYDFS(0.051)DT(0.318)EEEMPQVHT(0.63)PK;DGDS(0.001)Y(0.001)DPY(0.006)DFS(0.3)DT(0.3)EEEMPQVHT(0.391)PK 65.155 0.00026777 4764100.0 1558.78 2103.2 1514.88 1350.98 2085.5099999999998 1992.61 2003.2 1667.77 2617.8999999999996 2449.4 2203.8 True False 1821.8639554879485 2210.243896506471 1729.7127630798432 1681.9701606477963 1778.734241658392 2203.4666676125303 2367.1555101592044 1904.1815048314165 2024.9498299272618 1896.0788388178194 1656.5356382142147 1.0998036585871231 1.3342567739074829 1.0441747965920705 1.0153540448191025 1.0737675668577287 1.3301655676951933 1.4289795254336062 1.1494962504303077 1.2224004019075656 1.1446049182870814 1.0 10.693953526126197 -10.727617871971324 0.9665747865352813 0.9993277292397561 1.1912464887378327 0.06771434863915293 0.1322242304937392 0.6956203656846585 1.147810576245869 0.09209706961053647 0.023437562669605946 1.8723288448214225e-11 10.727617871971324 0.19191875949807657 DGEKEES(ph)KKEETPGTPK ddPTM_A549_PD325901_60min_R1 1 DGEKEESKKEETPGTPK 17 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 DGEKEES(0.558)KKEET(0.433)PGT(0.009)PK 84.14 3.4686e-05 259030000.0 18514.0 17449.0 20410.0 17623.0 20686.0 17219.0 17844.0 17883.0 16551.0 17805.0 19706.0 True False 20393.527650713568 18919.488467270836 21795.145335300374 18711.532685263086 19233.08672282586 17078.77417294126 18523.06318461147 17526.309536057888 15855.419027652897 16680.789261379694 17282.286926626228 1.1800248275761442 1.094732922071918 1.2611262287123204 1.0827000364422181 1.1128785677776303 0.9882242000408278 1.071794679908573 1.0141198100961801 0.9174375529678885 0.9651957135186879 1.0 14.077006518312167 -7.264712643533339 0.809379206353819 0.9642167105197506 1.1727211246886622 0.6818622199779417 0.05367407483826816 0.26055192477682004 0.33398447231392125 0.010190942498571283 0.026038780952021928 5.436098989255772e-08 7.264712643533339 0.20850441416891163 DGEKEESKKEET(ph)PGTPK ddPTM_A549_PD325901_60min_R1 1 DGEKEESKKEETPGTPK 17 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 DGEKEES(0.002)KKEET(0.64)PGT(0.358)PK 78.324 8.5693e-05 1388300000.0 9766.8 10490.0 11727.0 9672.2 12306.0 9253.6 9506.6 10812.0 10984.0 10450.0 9971.1 True False 10758.318346061857 11374.0291146582 12522.864740179682 10269.629826840017 11441.669013395298 9178.2417496213 9868.378865211129 10596.346178150077 10522.380677888912 9790.185216591839 8744.717912010705 1.2302647671785398 1.300674216035738 1.4320490227568992 1.1743809154478126 1.3084091595087797 1.049575508549585 1.1284959634497869 1.2117424809777106 1.2032841749459546 1.1195541485843934 1.0 13.094196130957995 -14.999999974912068 0.08330837176271126 0.23524998959452684 1.4541091505862576 0.4029294600886143 0.09068545469480781 84.7153758383176 0.5196287825842686 11.885697325668039 1.1196823390163637 1.0000000577670993e-15 14.999999974912068 1.2188591609917308 DGEKEESKKEETPGT(ph)PK ddPTM_A549_MK2206_60min_R1 4 DGEKEESKKEETPGTPK 17 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 DGEKEES(0.002)KKEET(0.037)PGT(0.961)PK;DGEKEESKKEET(0.092)PGT(0.908)PK;DGEKEESKKEET(0.112)PGT(0.888)PK;DGEKEESKKEET(0.152)PGT(0.848)PK 85.805 2.1695e-05 1618980000.0 30687.5 29469.2 26887.3 25413.5 31400.1 26649.2 24339.699999999997 25761.4 31863.8 34170.5 36750.799999999996 True False 35866.79976265824 30969.056406869808 30700.323441300083 31639.80864085536 26781.186885460942 29469.20065569271 28761.908431820088 29413.157340978727 24646.700176032788 26451.360317557082 27624.56208951943 1.2983662744201783 1.1210695867870157 1.1113415424220454 1.1453505955433512 0.969470096889664 1.066775305258979 1.041171560968641 1.0647465558246036 0.8922023848256251 0.9575304843508288 1.0 14.753663974323704 -2.0000000304392023 0.28632981706862376 0.951015010755109 3.506093236437002 0.7121088812311092 0.056352763794011315 19.09825440484445 0.23809846265317372 0.023487443423180335 25.02000937217843 0.009999999299111492 2.0000000304392023 2.5550782256818927 DGEKEESKKEETPGT(ph)PK ddPTM_A549_PD325901_60min_R1 3 DGEKEESKKEETPGTPK 17 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 DGEKEESKKEET(0.169)PGT(0.83)PK;DGEKEES(0.038)KKEET(0.145)PGT(0.817)PK;DGEKEES(0.001)KKEET(0.117)PGT(0.882)PK 100.64 7.813600000000001e-09 1584821000.0 19052.0 17752.0 17237.7 17297.1 21122.1 15800.5 18388.6 18682.6 18219.4 17489.4 19013.1 True False 20986.145014658898 19248.02334064942 18407.55398071078 18365.502582435685 19638.55656328918 15671.825966639082 19088.388235628023 18309.960886783825 17453.70197767019 16385.11629924033 16674.60923397125 1.2585689247759846 1.1543312991968258 1.1039271578975896 1.1014052758141746 1.1777521312631105 0.9398616631273619 1.144757755206591 1.098074361435761 1.0467232984453807 0.9826386975149538 1.0 14.02536533209469 -2.0000000000000004 0.192199305835937 1.000702179869421 1.997742996120046 0.5434461653183507 0.06031618946409882 27.247467237377695 0.29667629345550023 0.049856422113636556 8.183584076639526 0.00999999999999999 2.0000000000000004 0.997040816250625 DGEMDRNFDT(ph)LDLPK ddPTM_A549_PD325901_60min_R1 2 DGEMDRNFDTLDLPK 15 1 C9JJX6;E9PDC3;O00192-2;O00192 C9JJX6 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome 1 DGEMDRNFDT(1)LDLPK;DGEMDRNFDT(1)LDLPK 54.974 0.004231 6777200.0 1787.3600000000001 1951.98 1920.9499999999998 2024.58 2072.4 2703.5 2455.0 2625.6 2589.6 2727.0 2625.2 True False 1968.811471415112 2116.480205074406 2051.3172186107417 2149.6337084452102 1926.8417733918757 2681.483592342567 2548.426368427548 2573.2303482566454 2480.7681175765783 2554.8167546072696 2302.317042513914 0.8551435076314923 0.9192826904340717 0.890979470130185 0.9336827503557077 0.8369141772446532 1.164689112240875 1.1068963662992763 1.117669852040412 1.077509340272186 1.1096719988736432 1.0 11.168870799352083 -7.250253064809442 24.9943402502868 1.0580729244583513 0.8917751473979455 0.782803845371479 0.052726050934810524 349.372161274793 780625.6544826634 0.008727764492272558 0.01502769680786046 5.620137425191887e-08 7.250253064809442 -0.16629777706040583 DGFPS(ph)GTPALNAK ddPTM_A549_PD325901_60min_R1 2 DGFPSGTPALNAK 13 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 DGFPS(0.901)GT(0.099)PALNAK;DGFPS(0.989)GT(0.011)PALNAK 126.32 1.3077000000000002e-06 7656900.0 7131.7 7610.4 7262.4 7969.4 9062.8 9024.7 7314.4 8571.7 8330.5 7826.6 9404.0 True False 7855.704933919947 8251.75511670112 7755.270136358906 8461.651738179407 8426.260192962689 8951.205835329743 7592.753494593263 8400.730719131441 7980.398055094106 7332.427140304086 8247.367616867616 0.9525105826316466 1.0005319879066057 0.9403327821228357 1.0259821231775257 1.0216908696696385 1.0853409537635534 0.9206275077473777 1.0185954003008384 0.9676297245162808 0.88906272654898 1.0 13.009718000129297 -3.6967609491964524 1.0760640335778533 0.992504304024233 1.4789404627130025e-09 0.023258153831529516 0.052781553720562736 104.62857811137935 5.571125631335989 0.006046574259858609 232.4486050237643 0.0002010198991654605 3.6967609491964524 -0.9925043025452925 DGGAAS(ph)PATEGR ddPTM_A549_MK2206_60min_R1 3 DGGAASPATEGR 12 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 DGGAAS(0.805)PAT(0.195)EGR;DGGAAS(0.973)PAT(0.027)EGR;DGGAAS(0.98)PAT(0.02)EGR 135.02 3.9706e-08 218299100.0 2018.34 2667.0 2562.63 2345.8199999999997 3308.24 2579.96 2490.41 2454.1 3496.37 4198.08 4354.6 True False 2358.9864483246815 2802.738908321966 2926.0494679785156 2920.546005307862 2821.602278399029 2852.969654761154 2942.885260610814 2801.976190366046 2704.447777555588 3249.7308123068165 3273.2326391540146 0.7206901275842021 0.856260222630051 0.8939326319117878 0.892251277948485 0.8620231402581541 0.871606136586283 0.8990761076400055 0.8560272059031626 0.8262314585298061 0.9928199949597006 1.0 11.676500427657801 -10.82112486155843 0.912706125785156 1.0059825168957683 0.8558385158099936 0.5788926828912988 0.04697104310808055 0.37721002401664516 0.5205533959210689 0.03961075646822673 0.008363232310697492 1.5096460619358495e-11 10.82112486155843 -0.15014400108577475 DGGAAS(ph)PATEGR ddPTM_A549_PD325901_60min_R1 3 DGGAASPATEGR 12 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 DGGAAS(0.999)PAT(0.001)EGR;DGGAAS(0.965)PAT(0.035)EGR;DGGAAS(0.958)PAT(0.042)EGR 103.88 0.00018767 330124100.0 2820.25 2236.2000000000003 2313.52 2051.4300000000003 2979.59 2677.3 2495.0099999999998 2659.45 2411.7 2436.36 3035.2200000000003 True False 3106.5597038416818 2424.6524219445832 2470.5293795259245 2178.1421719644372 2770.313877427473 2655.4969564559856 2589.958970871859 2606.4051834518345 2310.3446359126647 2282.5278138082003 2661.907181844844 1.1670428349378694 0.9108703858953374 0.9281050054546662 0.8182637572114246 1.0407251974531648 0.9975918674277681 0.9729711796625752 0.9791495365535083 0.8679283228468816 0.8574783633989396 1.0 11.378244551393955 DGGEALVS(ph)PDGTVTEAPR ddPTM_A549_PD325901_60min_R1 2 DGGEALVSPDGTVTEAPR 18 0 Q96HN2-2;Q96HN2 Q96HN2-2 AHCYL2 Putative adenosylhomocysteinase 3 1 DGGEALVS(0.999)PDGT(0.001)VT(0.001)EAPR;DGGEALVS(1)PDGTVTEAPR 125.52 7.597800000000001e-11 4962700.0 1279.0 1275.6399999999999 1444.4099999999999 1130.8 1363.3899999999999 1204.24 1247.12 1347.63 1178.46 1470.77 1560.9699999999998 True False 1408.8431384499645 1383.1426596589693 1542.4363485429303 1200.6469477668677 1267.6301898401607 1194.4330687044996 1294.57983405025 1320.750462454717 1128.9334244050413 1377.9053311968216 1368.9805858041075 1.0291184207133535 1.0103449778628841 1.1267043262245673 0.8770372350179353 0.9259665206249686 0.872498179368203 0.9456524420248398 0.9647693153215455 0.8246526182414281 1.0065192636661622 1.0 10.418886271825658 -6.271146136580081 24.953899152154964 0.9162572252470889 1.050884817244379 0.47740253678007727 0.05891610929724012 444.68973907848283 1143197.9537504194 0.009590282269656579 0.022562534161407292 5.356163966021053e-07 6.271146136580081 0.13462759199729013 DGGGVRDEGPAAAGDGLGRPLGPT(ph)PSQSR ddPTM_A549_PD325901_60min_R1 1 DGGGVRDEGPAAAGDGLGRPLGPTPSQSR 29 2 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 DGGGVRDEGPAAAGDGLGRPLGPT(0.842)PS(0.157)QS(0.001)R 163.4 1.5874999999999997e-46 61007000.0 3395.5 3584.8 3362.7 3626.9 3822.7 3534.5 3682.5 3946.8 4440.6 4335.0 4620.1 True False 3740.208660365014 3886.9036768566934 3590.9130435577913 3850.925375712461 3554.206739599073 3505.71620385974 3822.6395526413216 3868.0779777952957 4253.977024602469 4061.287360184273 4051.8569892269325 0.9230850620615367 0.9592894535002552 0.8862388413770037 0.9504099937266522 0.8771797102042321 0.8652122256981748 0.9434290407595693 0.9546432630963363 1.0498833092858244 1.0023274194973846 1.0 11.984367539607131 -8.495588838751434 2.634765719670958 1.0233814935631758 0.9133296600831211 0.6647606402829183 0.031478828007438446 0.114609546541802 1.5883049288264433 0.005772991187375357 0.006837526445848079 3.1945608224869852e-09 8.495588838751434 -0.11005183348005465 DGGGVRDEGPAAAGDGLGRPLGPTPS(ph)QSR ddPTM_A549_MK2206_60min_R1 2 DGGGVRDEGPAAAGDGLGRPLGPTPSQSR 29 2 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 DGGGVRDEGPAAAGDGLGRPLGPT(0.164)PS(0.835)QS(0.001)R;DGGGVRDEGPAAAGDGLGRPLGPT(0.024)PS(0.974)QS(0.002)R 177.46 3.222199999999999e-58 40796000.0 6206.5 7672.2 5529.0 6082.299999999999 8907.4 7268.3 6040.5 6817.5 10761.5 10122.5 8030.9 True False 7254.005465643611 8062.682209384251 6313.095338949918 7572.463773044823 7597.133259561426 8037.426681692937 7137.980660501531 7783.901502718111 8324.037432584213 7835.820219618431 6036.605888435673 1.2016695473759702 1.3356317040391743 1.0458021370989146 1.2544240775352578 1.2585107260547281 1.331447974281415 1.1824493419681021 1.2894500066054888 1.378926765540645 1.2980506537008676 1.0 12.559521899733625 -10.969978538548988 1.2412936067910623 1.0001859391220986 1.2633656273344298 0.0 0.12178219026422034 0.28530164274362396 0.7827028105108013 0.06329820988986372 0.014673125882119616 1.0715722576195707e-11 10.969978538548988 0.2631796882123312 DGGNPFAEPSELDNPFQDPAVIQHRPS(ph)R ddPTM_A549_MK2206_60min_R1 2 DGGNPFAEPSELDNPFQDPAVIQHRPSR 28 1 O14828 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 1 DGGNPFAEPS(0.007)ELDNPFQDPAVIQHRPS(0.993)R;DGGNPFAEPSELDNPFQDPAVIQHRPS(1)R 88.242 9.4709e-10 11343700.0 832.95 951.03 864.7 810.15 1491.3600000000001 1242.08 941.72 1128.69 1658.8000000000002 1479.3899999999999 1734.15 True False 973.5315963276967 999.4333648224374 987.3274623964533 1008.636786369016 1271.9829195926466 1373.5160811740245 1112.8183341788765 1288.6852639681565 1283.0844485592813 1145.1947715190222 1303.512694894809 0.7468524089872854 0.7667231540871873 0.7574360159769128 0.7737836311984756 0.9758116852826608 1.053703647500621 0.8537073237086339 0.9886250199290547 0.9843283104065387 0.878545161857006 1.0 10.348188917994015 -6.7569714645851855 5.422084245035149 0.9855825757564084 0.7595348752586134 0.745035465717939 0.05554205836612718 0.04519192899119677 4.064726200685759 0.006263139544446887 0.012671054931126228 1.749961666464935e-07 6.7569714645851855 -0.226047700497795 DGGNPFAEPSELDNPFQDPAVIQHRPS(ph)R ddPTM_A549_PD325901_60min_R1 3 DGGNPFAEPSELDNPFQDPAVIQHRPSR 28 1 O14828 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 1 DGGNPFAEPSELDNPFQDPAVIQHRPS(1)R;DGGNPFAEPS(0.003)ELDNPFQDPAVIQHRPS(0.997)R;DGGNPFAEPSELDNPFQDPAVIQHRPS(1)R 78.22800000000001 2.4943e-06 13367100.0 1750.17 1960.96 1825.4699999999998 1976.28 2570.65 2058.69 2076.59 2061.1800000000003 2042.07 2211.17 2417.69 True False 1927.845969992942 2126.2169811897174 1949.3573716428584 2098.3503271424684 2390.0964122610612 2041.924711196494 2155.615768803649 2020.0681479355703 1956.2488993897148 2071.556348839367 2120.3294569996447 0.909220009951154 1.002776702540559 0.9193653208974802 0.9896340968217846 1.1272287919081916 0.9630223758179086 1.0166419004780212 0.9527142780886757 0.9226155364354978 0.9769973916085221 1.0 11.050072732965239 -5.245438266105228 22.512463904558746 0.9764036989842936 0.9092198062575558 0.11793855655659691 0.05450757381905243 1384.9328102057057 1948373.2127893812 0.00783718332369739 0.23893363756527375 5.6827916530757215e-06 5.245438266105228 -0.06718389272673775 DGGQQEPGT(ph)RER ddPTM_A549_MK2206_60min_R1 1 DGGQQEPGTRER 12 1 Q8WY21-4;Q8WY21;Q8WY21-3;Q8WY21-2 Q8WY21-4 SORCS1 VPS10 domain-containing receptor SorCS1 1 DGGQQEPGT(1)RER 40.025 0.043838 13863000.0 1040.7 1008.9 891.95 887.55 1238.5 997.58 1070.5 941.57 1535.5 1196.0 1235.5 True False 1216.3447173278514 1060.248700639682 1018.4419221516326 1104.9997898436336 1056.3182906310296 1103.1432534599896 1264.9959932235565 1075.0404309371902 1187.7117016896402 925.8227693419253 928.6912519346862 1.3097406859318574 1.141658972700486 1.096642097177048 1.1898462352710382 1.1374267695861955 1.1878471463598674 1.3621276076287647 1.1575864731121603 1.2789091091526408 0.9969112634723487 1.0 9.85905523488953 -10.902869052301662 1.1262966252586062 0.9987344211405711 1.2077846749676524 0.5218568545931521 0.07667791801377292 0.34221793375263115 0.763273815535564 0.0563682684537038 0.013098140475156127 1.2506360629310017e-11 10.902869052301662 0.2090502538270813 DGGQTES(ph)NEEGKENR ddPTM_A549_MK2206_60min_R1 2 DGGQTESNEEGKENR 15 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 DGGQT(0.208)ES(0.792)NEEGKENR;DGGQT(0.274)ES(0.726)NEEGKENR 101.49 1.9671e-06 81614000.0 8082.5 8689.2 8156.0 7966.6 3243.8 849.4100000000001 1258.33 1294.9699999999998 2495.5 11985.6 11531.2 True False 9446.628401847176 9131.443165426042 9312.643440852866 9918.417357634264 2766.6413170358755 939.2940024072748 1486.9522729126559 1478.5359631792983 1930.2732344946257 9278.044635639286 8667.684795070223 1.0898675511619873 1.0535042957053058 1.0744095639183218 1.1442983440370835 0.31919034695509607 0.10836734660004037 0.17155126288837422 0.17058026429620757 0.2226976730386499 1.0704178630164547 1.0 13.081430974681414 -6.754357935090362 24.98321858627782 0.4955408545468128 1.086725337035374 0.5014558818539522 0.3097737559004907 141.72261175019725 499990.38020393637 0.053821520995616594 0.11018815739984354 1.7605244662966552e-07 6.754357935090362 0.5911844824885613 DGGQTES(ph)NEEGKENR ddPTM_A549_PD325901_60min_R1 3 DGGQTESNEEGKENR 15 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 DGGQT(0.029)ES(0.971)NEEGKENR;DGGQT(0.013)ES(0.987)NEEGKENR;DGGQT(0.02)ES(0.98)NEEGKENR 118.46 2.1161999999999999e-07 170480600.0 5347.25 5071.27 5096.76 4933.74 5752.6 4947.0 5723.92 5420.49 5115.18 5972.799999999999 4903.67 True False 5890.098883562601 5498.643720523613 5442.656782907666 5238.485914463482 5348.557221392635 4906.713272172625 5941.746907849211 5312.374074657856 4900.206773117613 5595.676388675573 4300.549676925269 1.369615357582336 1.2785909089776955 1.2655723551132099 1.2180968266849095 1.2436915332220166 1.140950260032978 1.3816249908075326 1.2352779234621012 1.1394373141205234 1.301153761506197 1.0 12.070305355056389 -9.439878761428064 0.524996753972093 0.9993777748650339 1.278161654940354 0.0 0.10932190198039779 0.32087489819353654 0.20084111579152938 0.03554091109036732 0.019868802174993733 3.631794265615835e-10 9.439878761428064 0.2787838800753202 DGGRS(ph)SPGGQDEGGFMAQGK ddPTM_A549_MK2206_60min_R1 2 DGGRSSPGGQDEGGFMAQGK 20 1 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 DGGRS(0.5)S(0.5)PGGQDEGGFMAQGK;DGGRS(0.5)S(0.5)PGGQDEGGFMAQGK 96.41 4.2306999999999994e-07 41709000.0 17187.5 17707.0 17969.1 13584.1 20511.4 13332.9 12798.7 14862.8 21788.9 23903.7 31125.4 True False 20088.329805969486 18608.210667287993 20517.38857933168 16912.20510981343 17494.20023128727 14743.778628337264 15124.05812094379 16969.647415416017 16853.748939723475 18503.83756815936 23396.10416266118 0.8586185830899697 0.7953550957849476 0.8769574813261534 0.7228641568797733 0.7477398847970165 0.6301809278088049 0.6464348942795743 0.7253193650290969 0.7203656139735041 0.7908939642049639 1.0 14.513980696830938 -10.654079629274989 0.8939794998217309 1.0020526194554342 0.7444847384511876 0.1593046404974775 0.09378503907213413 0.3350369199208762 0.47101261931372745 0.056205492283703154 0.014555151397883959 2.2177897437131507e-11 10.654079629274989 -0.25756788100424666 DGGRSS(ph)PGGQDEGGFMAQGK ddPTM_A549_MK2206_60min_R1 2 DGGRSSPGGQDEGGFMAQGK 20 1 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 DGGRS(0.272)S(0.728)PGGQDEGGFMAQGK;DGGRS(0.182)S(0.818)PGGQDEGGFMAQGK 135.8 1.2009e-17 41852000.0 19510.6 17832.9 15703.3 13343.7 21441.3 15657.0 14148.5 15147.2 21648.8 24469.4 34554.7 True False 22803.51229162755 18740.518439525607 17930.26406875242 16612.907099021453 18287.31317311836 17313.81334772455 16719.09930884959 17294.361986354506 16745.381366029753 18941.74554526365 25973.814328796027 0.8779423770018367 0.7215158390790842 0.6903207916164213 0.6396021350088521 0.704067294145705 0.6665872454678128 0.6436905684011862 0.6658383619529076 0.6447024358476638 0.7292631457776985 1.0 14.664770273009717 -10.730675008399828 0.9039524566451262 1.0068217684476921 0.689321157765684 0.1284015482468186 0.10068693909782393 0.23463542511033414 0.3289801002883507 0.05015823116548978 0.01189096918511241 1.8591952091338055e-11 10.730675008399828 -0.3175006106820081 DGGRSS(ph)PGGQDEGGFMAQGK ddPTM_A549_PD325901_60min_R1 1 DGGRSSPGGQDEGGFMAQGK 20 1 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 DGGRS(0.242)S(0.758)PGGQDEGGFMAQGK 66.372 0.00042455 52832000.0 5251.4 6602.3 5715.6 7084.5 6850.0 6769.9 6117.5 6339.6 6370.1 7475.8 8213.5 True False 5784.518262123645 7158.698991773863 6103.494986694889 7522.093474933122 6368.879631217109 6714.768178953194 6350.3048101244485 6213.151704680011 6102.386849619467 7003.77671217199 7203.291569666325 0.8030381952721094 0.9938094165061643 0.8473202740254506 1.0442578093894324 0.8841624095902219 0.9321805335812944 0.8815837521926952 0.8625434142974474 0.8471664364270827 0.972302265490056 1.0 12.814440586507905 -11.005256070890626 1.3147629060286656 0.9994633282110219 0.8978789556802622 0.2002944499961774 0.06618744586664468 0.4876371739094449 1.5135350073871499 0.04338202043296758 0.010093217408219026 9.87970390828433e-12 11.005256070890626 -0.10158437253075969 DGGS(ph)GNS(ph)TIIVSR ddPTM_A549_MK2206_60min_R1 2 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 2 DGGS(0.88)GNS(0.879)T(0.239)IIVS(0.002)R;DGGS(1)GNS(0.983)T(0.017)IIVSR 81.619 0.00068409 21513000.0 876.09 1248.98 907.3199999999999 641.9200000000001 1441.8700000000001 1237.6399999999999 850.1500000000001 959.57 1526.02 1364.75 1397.68 True False 1023.9525736559593 1312.547747175093 1035.9916192685903 799.190428816884 1229.7728330336395 1368.606243321058 1004.611250480155 1095.5919860598776 1180.3789065531917 1056.4520271399604 1050.5974819943929 0.9746383283844804 1.2493345640648492 0.9860975654557294 0.760700879750585 1.1705461455124664 1.3026932452978812 0.956228496353389 1.0428275384594201 1.1235310637832763 1.005572586310081 1.0 10.036994316511255 DGGS(ph)GNS(ph)TIIVSR ddPTM_A549_PD325901_60min_R1 2 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 2 DGGS(0.995)GNS(0.82)T(0.185)IIVSR;DGGS(0.903)GNS(0.82)T(0.278)IIVSR 64.842 0.006635800000000001 31621000.0 1384.77 923.55 1323.36 1132.97 1724.9499999999998 1588.13 1717.3 1190.33 1189.74 1297.7 1526.19 True False 1525.3508309862052 1001.3807996990073 1413.1711676101463 1202.9509837384394 1603.7954627544461 1575.1967958228233 1782.652791242618 1166.5879343541799 1139.7393652322983 1215.7630005331323 1338.4783053155227 1.1396156552770056 0.7481486967119347 1.055804313000812 0.89874522355808 1.19822297932306 1.1768564268596782 1.3318503439040716 0.8715777683667255 0.8515187438646044 0.9083173001048662 1.0 10.386378039952051 DGGS(ph)GNSTIIVSR ddPTM_A549_MK2206_60min_R1 1 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.999)GNSTIIVSR 175.08 6.4385e-22 19615000.0 4303.6 4902.2 3944.3 3649.7 4872.5 3957.1 3946.2 4193.6 5697.1 5808.4 5485.9 True False 5029.94246708191 5151.701041010853 4503.661049994599 4543.876663841261 4155.761704561722 4375.837695489608 4663.173459559826 4788.055642361375 4406.715946399252 4496.278405891006 4123.599626862401 1.2197940930820033 1.2493213471674316 1.0921673919689876 1.101919942528136 1.0077995151347396 1.0611693887505593 1.1308501992245985 1.1611349489825593 1.068657567454547 1.0903770522726939 1.0 12.009688548410665 -2.0000000000000004 0.23796646002906152 1.025064592040794 2.256864331275133 0.41407757246048715 0.05740048859248332 27.010576571685178 0.32301993606797663 0.0314189506130546 13.307192698728832 0.00999999999999999 2.0000000000000004 1.231799739234339 DGGS(ph)GNSTIIVSR ddPTM_A549_PD325901_60min_R1 2 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.998)GNS(0.002)TIIVSR;DGGS(0.975)GNS(0.022)T(0.003)IIVSR 159.02 1.7237e-18 40619000.0 11072.400000000001 10174.400000000001 9235.0 10159.8 12415.900000000001 10787.9 8785.9 10371.0 11870.2 11772.6 12815.8 True False 12196.461896929935 11031.832395059902 9861.742634566333 10787.347771420069 11543.850016529717 10700.046919116841 9120.252232328952 10164.142269107897 11371.336773732437 11029.276026875521 11239.537846049763 1.0851390923708213 0.9815201075137746 0.8774153145480382 0.9597679120953696 1.0270751497657804 0.9520006129858328 0.8114437050037914 0.9043203028743906 1.011726365397577 0.9812926632701237 1.0 13.456295094741758 -8.787134061078708 24.453638213130066 1.0055374658229754 0.9468423067958631 0.08262965807636169 0.0691357895697993 272.196695529409 259048.19614111996 0.012278308513460035 0.013073846941207216 1.63254792371698e-09 8.787134061078708 -0.05869515902711231 DGGSGNS(ph)TIIVSR ddPTM_A549_MK2206_60min_R1 3 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.103)GNS(0.448)T(0.448)IIVSR;DGGS(0.001)GNS(0.815)T(0.185)IIVSR;DGGS(0.001)GNS(0.766)T(0.233)IIVSR 137.39 1.3392e-08 18903300.0 6135.65 6414.719999999999 5956.68 5476.29 8279.09 6700.5 5747.4400000000005 6671.4400000000005 9012.740000000002 8576.21 9079.58 True False 7171.197717759805 6741.201848515598 6801.426793925881 6817.981295839997 7061.246828244202 7409.542462568073 6791.675451931621 7617.137050428121 6971.3687803883395 6638.838204563475 6824.869702340057 1.0507450003479188 0.9877407397542297 0.9965650760473657 0.9989906904013569 1.0346346723400592 1.0856679740021333 0.9951362807121351 1.116085344137254 1.0214654761830912 0.9727421173018443 1.0 12.736585787605604 -4.886775251476584 15.039221681415267 1.0196424151627204 2.620244853103505 0.03999498136130697 0.04161674890915122 2972851.347005108 3217810.9125787416 0.005282756695173608 160257940.41876933 1.2978507383570254e-05 4.886775251476584 1.6006024379407848 DGGSGNS(ph)TIIVSR ddPTM_A549_PD325901_60min_R1 2 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.001)GNS(0.747)T(0.252)IIVSR;DGGS(0.001)GNS(0.5)T(0.5)IIVSR 132.05 3.6013e-08 19856000.0 10577.2 10868.7 9632.8 10439.7 11904.0 10129.7 9256.4 11251.6 10866.3 11439.0 13690.9 True False 11650.989557476913 11784.643492705967 10286.539734732061 11084.536558721053 11067.90410657058 10047.207081691335 9608.657367296431 11027.178011290558 10409.627199576136 10716.739587808044 12007.00609376571 0.9703492666274527 0.9814805956353101 0.856711461158752 0.9231723938639772 0.9217871649384161 0.8367787109650969 0.8002542259294303 0.9183953039730779 0.8669627647629022 0.8925405304301794 1.0 13.551588844320477 -10.830939246403252 1.0447102885610218 1.0007833148020469 0.8943463530792859 0.0 0.0606161039197049 0.4980983383793802 0.9532015355164132 0.03932096292384407 0.009395745256613323 1.4759129847841827e-11 10.830939246403252 -0.10643696172276096 DGGSGNST(ph)IIVSR ddPTM_A549_MK2206_60min_R1 3 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.026)GNS(0.05)T(0.924)IIVSR;DGGSGNS(0.042)T(0.958)IIVSR;DGGSGNS(0.088)T(0.911)IIVSR 135.02 2.4825e-08 22765900.0 5451.25 5978.51 5738.57 5415.139999999999 7832.92 6271.72 6131.75 6215.9400000000005 8596.4 9582.599999999999 9450.0 True False 6371.2877297333025 6282.7906227191515 6552.385516230391 6741.849543094874 6680.707844206384 6935.389247569197 7245.809604342404 7097.06853051788 6649.329125629972 7417.884004595259 7103.304193268137 0.8969470483569361 0.8844884650545315 0.9224419140658714 0.9491145753667967 0.9405070742342343 0.9763610087460319 1.0200618482887611 0.9991221461758365 0.9360895922114103 1.044286405701906 1.0 12.794274553556543 -6.299576294592519 1.0824705236013172 0.975377116102963 0.8861746309524512 0.6042193169358847 0.030738327606640126 0.34517834074969067 0.6967365157207569 0.0045652709091540955 0.0228409310195282 5.016764393911326e-07 6.299576294592519 -0.08920248515051177 DGGSGNST(ph)IIVSR ddPTM_A549_PD325901_60min_R1 3 DGGSGNSTIIVSR 13 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DGGS(0.021)GNS(0.188)T(0.791)IIVSR;DGGS(0.007)GNS(0.037)T(0.956)IIVSR;DGGS(0.001)GNS(0.135)T(0.865)IIVSR 115.83 1.8860999999999998e-05 18745400.0 6751.82 6485.16 6386.710000000001 6793.870000000001 8114.16 6899.610000000001 6839.620000000001 7537.14 7408.51 7727.74 7890.94 True False 7437.259795972819 7031.687192870996 6820.150547007164 7213.511919901737 7544.249393932359 6843.421863718401 7099.9054818836785 7386.805829928059 7097.156088487513 7239.809177575638 6920.404404790015 1.0746857207976255 1.0160803880195146 0.985513294900301 1.0423541021546148 1.0901457418746432 0.988876005422699 1.0259379461942166 1.0673951113052325 1.0255406582273079 1.0461540618297602 1.0 12.75664063115672 -9.989638762343473 0.8965236221618071 1.002549342623526 1.0340528024985842 0.0 0.03402786801362113 0.7751484622266446 1.2633049270173626 0.012375879634105332 0.006157837307117631 1.0241445014643874e-10 9.989638762343473 0.031503459875058315 DGGYS(ph)EEEDVK ddPTM_A549_PD325901_60min_R1 2 DGGYSEEEDVK 11 0 Q8WYP3-2;Q8WYP3;E7EPJ1 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 DGGYS(1)EEEDVK;DGGY(0.001)S(0.999)EEEDVK 98.105 2.7237e-07 6594500.0 2179.0 2272.4 2288.6 2364.5 2454.4 1682.5 2179.8 2418.5 2086.2 2726.9 2423.8 True False 2400.210475904983 2463.9031229884936 2443.9181584697894 2510.5497948308785 2282.0114112203337 1668.798277831098 2262.75348183233 2370.261120223453 1998.5242689559238 2554.7230686243356 2125.6879657341246 1.1291452530174388 1.1591085628306521 1.1497069174147398 1.1810528333888546 1.0735401658221373 0.7850626736999774 1.0644805438557718 1.115055999954755 0.9401776277477848 1.20183352862989 1.0 11.053714120794004 -7.004205804568101 22.250519793946946 0.9771026899079811 1.1512782217573208 0.23002708053863685 0.10329888184188771 26.046318805982903 137803.57187063532 0.011198239127188014 0.020755073221089545 9.903625181786875e-08 7.004205804568101 0.17417553184933965 DGHRYS(ph)RS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 DGHRYSRSPAR 11 2 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 2 DGHRY(0.107)S(0.937)RS(0.956)PAR 51.54600000000001 0.0077168 80864000.0 754.26 726.86 717.6 517.73 915.23 923.59 622.51 265.43 718.14 722.86 792.11 True False 830.8319199431353 788.115043115392 766.3006512793505 549.7090062498589 850.9474021720936 916.068589255289 646.1999587005423 260.13579042419315 687.9590731991211 677.2184962359406 694.6854915990011 1.1959828296266235 1.1344918709923513 1.1030900465698632 0.7913063003296057 1.2249390730953869 1.3186810439163146 0.9302050590017986 0.3744655582563302 0.9903173184394605 0.9748562542700357 1.0 9.440216156953525 DGIPVS(ph)SEAERHELGK ddPTM_A549_MK2206_60min_R1 1 DGIPVSSEAERHELGK 16 1 H0Y621;H0Y5K5;Q9Y282-2;Q9Y282;Q9Y282-3 H0Y621 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 1 DGIPVS(0.604)S(0.396)EAERHELGK 57.989 0.0032544000000000006 2827300.0 438.97 405.11 476.9 298.24 410.91 416.61 464.32 392.03 706.26 493.79 427.98 True False 513.0574042139015 425.72836863528784 544.5315910915564 371.30881338850253 350.4656833291855 460.6953936766636 548.6809337445692 447.60145304152263 546.2932376654678 382.2424960479509 321.7007543528994 1.5948281042918773 1.3233676417440792 1.6926649494089028 1.1542056036995922 1.089415174155083 1.432061900517926 1.7055630934041173 1.3913596626214704 1.6981409905747216 1.1881927253071916 1.0 8.329575508730596 -11.00306183889019 1.2912536157719567 1.0007236736876688 1.469270856610386 0.29523800850364124 0.20765668315634941 0.3700295313601818 1.1010871888570366 0.15076602186038623 0.03455287899710289 9.929746493824023e-12 11.00306183889019 0.46854718292271724 DGIVLGADTR ddPTM_A549_PD325901_60min_R1 2 DGIVLGADTR 10 0 Q5TBG5;Q99436-2;Q99436 Q5TBG5 PSMB7 Proteasome subunit beta type;Proteasome subunit beta type-7 0 ; 104.17 0.00097733 5129300.0 2584.0 3168.8 3425.0 3135.2 3758.1 3371.3 2968.6000000000004 3360.0 3735.5 3918.7 3666.1 False True 2846.325777759739 3435.845896904567 3657.441096198124 3328.854183444183 3494.144020741171 3343.8452505509545 3081.571697480253 3292.982164130993 3578.5099255511677 3671.272613230472 3215.192941322666 0.8852737082051498 1.068628215976093 1.1375494917246012 1.0353512974791363 1.08676029230885 1.0400138690200544 0.9584406764132035 1.0241942627481406 1.1130000565624036 1.141851416145553 1.0 11.650689599862984 -11.296764041467993 1.862290163381384 0.9998216665927211 1.0538206520238904 0.0 0.07988613161542206 0.814969316337457 5.104337753713358 0.05217355537037283 0.01030456540351066 5.049355619128896e-12 11.296764041467993 0.05399898543116932 DGKFS(ph)PIQEK ddPTM_A549_MK2206_60min_R1 2 DGKFSPIQEK 10 1 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 DGKFS(1)PIQEK;DGKFS(1)PIQEK 68.03399999999999 0.0011966 95167000.0 5456.7 6713.0 6443.200000000001 5243.4 8304.2 5978.6 5854.6 6520.7 9755.0 9357.1 9168.3 True False 6377.6575564936 7054.663026458705 7356.942645672292 6528.033235385168 7082.663180507226 6611.25148372651 6918.305036830111 7445.029193806231 7545.508075533988 7243.324611211818 6891.558077792623 0.9254304301729651 1.0236673545843966 1.0675296591317027 0.947250703207613 1.027730318827381 0.9593260927497115 1.0038811192963282 1.0803114636437752 1.0948914585583562 1.051043106573059 1.0 12.750614476152634 -8.114394925042511 6.911829267749872 1.0486478526072087 0.9951604451868906 0.31982002278981936 0.04376889261004095 0.31141901485530477 16.950356366069236 0.007992350575482924 0.010345408459108328 7.684313505686005e-09 8.114394925042511 -0.0534874074203181 DGKFS(ph)PIQEK ddPTM_A549_PD325901_60min_R1 1 DGKFSPIQEK 10 1 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 DGKFS(1)PIQEK 101.15 0.00012066 50249000.0 8590.3 8761.6 9237.8 10097.0 11135.0 10192.0 10559.0 9769.8 10590.0 10397.0 10744.0 True False 9462.38093215538 9499.970780837872 9864.732659404099 10720.668758049214 10352.91601366461 10108.999731146829 10960.82852310651 9574.93367474017 10144.939127717007 9740.53164563688 9422.556111827484 1.004226541063301 1.0082158883525474 1.046927451779415 1.1377665073909509 1.098737528415385 1.0728511044320235 1.1632542585072154 1.0161715739449317 1.076665292020152 1.0337462075084132 1.0 13.201902765903718 -10.667112811680072 0.7656924991348408 0.9963116227866501 1.0718471033445762 0.13213052847771367 0.049315958138287264 0.9464208183911623 0.9088687617556137 0.04384031111312912 0.009581894917497726 2.1522226040081472e-11 10.667112811680072 0.07553548055792614 DGKFS(ph)PIQEKS(ph)PK ddPTM_A549_MK2206_60min_R1 1 DGKFSPIQEKSPK 13 2 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 2 DGKFS(1)PIQEKS(1)PK 41.912 0.028422000000000003 3111200.0 1887.9 2425.1 2361.7 2393.6 2713.2 2415.1 2235.2 2423.4 3217.8 3290.9 3038.7 True False 2206.531365276498 2548.527231560406 2696.6245726167504 2980.032107452786 2314.091874154306 2670.664278986365 2641.306907102561 2766.9243713512383 2488.973437770708 2547.4834043706865 2284.106926146444 0.9660368085303147 1.115765292065407 1.18060347427179 1.304681524905863 1.013127646374441 1.1692378532786503 1.1563849646735913 1.211381279780699 1.0896921721479553 1.1153082963014298 1.0 11.157414473983868 -9.64803602499031 0.9927093688941313 1.0154745762134765 1.1417093282930308 0.06013208780783175 0.09260286239147661 0.4548007419873374 0.9327737103134068 0.026296845614622602 0.01737488357212545 2.2488680531314964e-10 9.64803602499031 0.12623475207955437 DGKFS(ph)PIQEKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 DGKFSPIQEKSPK 13 2 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 2 DGKFS(1)PIQEKS(1)PK 49.993 0.009237200000000001 19662000.0 2419.2 2225.8 2104.9 2001.0 2520.8 2383.8 2573.8 2339.0 2210.7 2395.6 2836.5 True False 2664.795403079088 2413.37597744578 2247.7511717919506 2124.597225399276 2343.7477042878977 2364.387123146371 2671.7473674374 2292.3468100899977 2117.7919669163357 2244.341407164347 2487.6284820549745 1.0712192042751334 0.9701512886088777 0.9035718910627416 0.8540653239523104 0.942161468722122 0.9504582939946095 1.0740138194712778 0.9214988599086713 0.8513296829464161 0.9022012022110096 1.0 11.280555325147192 DGKS(ph)PTVPCLQEEAGEPLGGK ddPTM_A549_MK2206_60min_R1 1 DGKSPTVPCLQEEAGEPLGGK 21 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 DGKS(0.785)PT(0.215)VPCLQEEAGEPLGGK 113.5 4.9312e-12 23085000.0 3709.2 3964.3 3270.2 3324.5 4482.4 3761.3 3654.5 3845.3 5441.4 5588.1 4696.3 True False 4335.222278766664 4166.0659371056545 3733.9635336288698 4139.002649242474 3823.044897799375 4159.318269451127 4318.475345385789 4390.383050737363 4208.931588130258 4325.744328895998 3530.0790987137752 1.22808077596512 1.1801622061736827 1.057756336108554 1.1724957241752931 1.0829912845840608 1.1782507284232306 1.2233367085058449 1.2437067068375465 1.1923051779955385 1.2253958644927057 1.0 11.785484795083075 -10.677178920405431 0.9595501573905236 1.000779288728429 1.1709610768815621 0.0 0.08507049916287766 0.3351584433882324 0.5530541439686366 0.038441505684067866 0.010363329455239576 2.1029119047738757e-11 10.677178920405431 0.17018178815313312 DGKS(ph)PTVPCLQEEAGEPLGGK ddPTM_A549_PD325901_60min_R1 1 DGKSPTVPCLQEEAGEPLGGK 21 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 DGKS(0.82)PT(0.18)VPCLQEEAGEPLGGK 81.34100000000001 3.6876e-05 23859000.0 3718.0 4596.2 3435.1 4791.3 5076.1 4557.3 3280.3 4035.9 4958.4 5192.1 7151.1 True False 4095.448622953063 4983.5379043653 3668.2265429343574 5087.247719168189 4719.572247594333 4520.186859768001 3405.1336115490362 3955.4008083976996 4750.015691300471 4864.269919910673 6271.560034557845 0.653019121300941 0.7946249221732352 0.5848985775024911 0.8111614480505963 0.752535608618641 0.7207436163985763 0.5429484199761956 0.6306885027971452 0.757389814516119 0.7756076467589155 1.0 12.61460863904104 -10.085645181723537 0.7715002122425201 0.9871767284975946 0.6919956091663457 0.2797260175443793 0.10200823587365264 0.27958601157232904 0.330088643602418 0.042154083124607555 0.017339417709466436 8.210220448079529e-11 10.085645181723537 -0.2951811193312489 DGKSPT(ph)VPCLQEEAGEPLGGK ddPTM_A549_MK2206_60min_R1 1 DGKSPTVPCLQEEAGEPLGGK 21 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 DGKS(0.43)PT(0.57)VPCLQEEAGEPLGGK 114.21 6.4795000000000005e-15 26765000.0 5677.4 5774.1 5628.6 4607.1 7522.1 6378.2 5888.5 6157.7 9167.8 7307.9 8710.2 True False 6635.60632089665 6067.977026824847 6426.820116623889 5735.839706820581 6415.609054465614 7053.136890493493 6958.3642280214035 7030.572832165354 7091.3079379682695 5657.040314443021 6547.216950709433 1.0135002965157034 0.9268024982992724 0.9816109905946375 0.8760729558838074 0.9798986504900286 1.0772725180168714 1.0627972588058838 1.0738261592818528 1.0831026360291727 0.8640374004759449 1.0 12.676666069992494 -7.0816887149201575 5.359845506811567 1.047105385097536 0.9476378879425561 0.19399182372679113 0.0674328774079471 0.13311484086971231 6.510781050094496 0.006492812846690303 0.011444258367374406 8.285358125825351e-08 7.0816887149201575 -0.09946749715497993 DGKSPT(ph)VPCLQEEAGEPLGGK ddPTM_A549_PD325901_60min_R1 1 DGKSPTVPCLQEEAGEPLGGK 21 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 DGKS(0.437)PT(0.563)VPCLQEEAGEPLGGK 65.801 0.00052242 25416000.0 5678.3 5145.3 5713.4 5569.0 6956.8 6256.7 5807.0 6070.8 6670.2 7151.8 8039.2 True False 6254.756835856476 5578.912488431918 6101.145681465219 5912.984481883341 6468.17836765711 6205.747509602276 6027.988562712327 5949.71313154953 6389.874690245323 6700.234127466173 7050.429364687591 0.8871455215456411 0.7912869131593836 0.8653580322388726 0.8386701257513199 0.9174162356768352 0.8801942674135643 0.854981767905341 0.8438795460243811 0.9063100074797306 0.950329941751436 1.0 12.783495403654852 -10.047310633885184 0.40181289995553937 1.0220792007798547 0.8495369816583507 0.597662103393759 0.03470628457743781 0.5643052860850158 0.16616950945740597 0.03981313051618603 0.011240624733428526 8.967871282323521e-11 10.047310633885184 -0.17254221912150403 DGKYDLDFKS(ph)PTDPSR ddPTM_A549_MK2206_60min_R1 2 DGKYDLDFKSPTDPSR 16 2 F5H0C8;P09104-2;P09104;U3KQP4 F5H0C8 ENO2 Enolase;Gamma-enolase 1 DGKY(0.001)DLDFKS(0.86)PT(0.129)DPS(0.01)R;DGKYDLDFKS(0.77)PT(0.22)DPS(0.009)R 61.766999999999996 0.0024927 8877600.0 1228.5 1098.5 1477.3 1468.7 1866.3 1743.9 1597.9 1216.6 2001.6 1504.1 2275.1 True False 1435.8407660586772 1154.4089579271395 1686.803353993618 1828.5315659324476 1591.7697422726615 1928.4383404928683 1888.2177464473798 1389.0567756812407 1548.2407958983936 1164.3227653571828 1710.1298804343223 0.8396091913755791 0.6750416860934292 0.9863597924885213 1.069235493077318 0.9307888017653952 1.1276560701945644 1.1041370413151477 0.8122522105329575 0.9053352108584796 0.6808387939876703 1.0 10.7398901833071 -5.773050719420834 24.997944023370312 0.9738565412140298 0.7573254418922982 0.25668312193147247 0.128851883268679 131.10878035598932 282265.0201613155 0.01330791166643049 0.04187337714485324 1.686356071475151e-06 5.773050719420834 -0.21653109932173153 DGKYDLDFKS(ph)PTDPSR ddPTM_A549_PD325901_60min_R1 2 DGKYDLDFKSPTDPSR 16 2 F5H0C8;P09104-2;P09104;U3KQP4 F5H0C8 ENO2 Enolase;Gamma-enolase 1 DGKYDLDFKS(0.772)PT(0.221)DPS(0.007)R;DGKY(0.001)DLDFKS(0.853)PT(0.123)DPS(0.023)R 57.482 0.0017689 21566900.0 5082.2 5652.9 5067.1 5078.5 6375.6 6232.3 4925.7 6923.1 6126.5 6364.299999999999 6505.0 True False 5598.141202682104 6129.289721854277 5410.9838769475955 5392.187410889665 5927.79985062596 6181.546215112477 5113.150208946464 6785.013339433116 5869.024510477642 5962.457011861763 5704.926238592494 0.9812819602840763 1.0743854461063953 0.9484756946274876 0.9451809165231229 1.0390668700544765 1.0835453354849287 0.8962692934322615 1.1893253401830308 1.028764310881894 1.045141823487065 1.0 12.477992518081432 -6.816872128260839 24.999139588494778 1.0252215073828137 0.9907725162550871 0.08512061352317812 0.07332767827986013 227.3901065058754 102547.65053988679 0.010044493519228504 0.018982317505167094 1.5245015551922476e-07 6.816872128260839 -0.03444899112772659 DGKYDLDFKSPT(ph)DPSR ddPTM_A549_MK2206_60min_R1 1 DGKYDLDFKSPTDPSR 16 2 F5H0C8;P09104-2;P09104;U3KQP4 F5H0C8 ENO2 Enolase;Gamma-enolase 1 DGKYDLDFKS(0.113)PT(0.886)DPS(0.002)R 59.9 0.0015042 7234300.0 1600.5 1553.5 1501.8 1439.1 1852.6 1426.1 1672.6 1500.4 2071.4 2147.4 2399.5 True False 1870.625271531879 1632.566514465008 1714.7778223973569 1791.6795646036528 1580.0849941243794 1577.0089554314343 1976.489769514918 1713.0862947822895 1602.2312073460905 1662.3008485659286 1803.6379271689837 1.037140128489114 0.9051520207426044 0.9507328475227271 0.9933698652123041 0.8760544288423252 0.8743489653196251 1.0958351117717098 0.9497950054039808 0.8883330646417354 0.9216377763662911 1.0 10.816694037276939 -4.142396352646897 0.002163004675504014 1.880396979434432 1.9185353870384337e-05 0.0 0.06863069060316596 1108738.5343871845 267.0551398513238 113534.3849466865 118676.55578336904 7.204496709718031e-05 4.142396352646897 -1.8803777940805615 DGKYDLDFKSPT(ph)DPSR ddPTM_A549_PD325901_60min_R1 1 DGKYDLDFKSPTDPSR 16 2 F5H0C8;P09104-2;P09104;U3KQP4 F5H0C8 ENO2 Enolase;Gamma-enolase 1 DGKYDLDFKS(0.183)PT(0.806)DPS(0.01)R 66.76 0.00084086 14472000.0 2252.8 2318.7 2667.4 2768.1 2784.3 2974.4 3187.6 2782.4 3176.8 2860.7 2992.9 True False 2481.5025975762933 2514.104986478357 2848.425804379235 2939.079250188774 2588.7403733135498 2950.1774725591786 3308.905862321648 2726.9028492494267 3043.2901436195825 2680.0749137898842 2624.7922735562615 0.9454091367825352 0.9578300773767758 1.0852004682717153 1.1197378473713249 0.9862648558493865 1.1239660762038366 1.2606353255674967 1.0389023454243935 1.1594403771603263 1.021061720118035 1.0 11.357987536862362 -5.7534411107019325 5.924748085950195 1.0875379260998725 0.9495344467925779 0.32994298020603463 0.07521448157996062 0.14271947401123264 17.761655836684465 0.01127085390606877 0.04121149271904288 1.7642449756773769e-06 5.7534411107019325 -0.13800347930729462 DGLAFNALIHR ddPTM_A549_MK2206_60min_R1 2 DGLAFNALIHR 11 0 O43707;M0QZQ3;C9JY79;Q9H254-2;Q9H254-4;Q9H254 O43707 ACTN4;SPTBN4 Alpha-actinin-4;Spectrin beta chain, non-erythrocytic 4 0 ; 121.9 1.0156e-05 10421300.0 498.07 442.84 586.54 466.72 777.29 485.83 452.11 387.253 748.6 376.02 770.8499999999999 False True 582.1320393576277 465.378664477428 669.7201917358806 581.0664209518573 662.9516706698366 537.2402081321461 534.2525347933697 442.14729866257375 579.0432952685538 291.07682084276837 579.4266706223007 1.0046690441991935 0.8031709413334637 1.1558325249623136 1.0028299531462634 1.1441511139931315 0.9271927499560099 0.9220364920716987 0.7630772297514546 0.999338353974395 0.5023531632228003 1.0 9.178482282199694 DGLAFNALIHR ddPTM_A549_PD325901_60min_R1 4 DGLAFNALIHR 11 0 O43707;M0QZQ3;C9JY79;Q9H254-2;Q9H254-4;Q9H254 O43707 ACTN4;SPTBN4 Alpha-actinin-4;Spectrin beta chain, non-erythrocytic 4 0 ;;; 164.43 1.058e-13 24717600.0 1290.83 1136.97 1364.05 1462.3000000000002 1607.59 1397.27 1307.452 1141.22 1727.73 1782.3400000000001 1561.8600000000001 False True 1421.8741113411784 1232.7864520965625 1456.6226356989932 1552.6229498757425 1494.6784242844265 1385.8910963833914 1357.2078013251867 1118.45747183023 1655.1195164429184 1669.8027482239522 1369.7611214462834 1.038045312484757 0.9000010533186297 1.0634136221949384 1.133499064593381 1.0911964143837338 1.0117757576007684 0.9908353946359333 0.8165346893838609 1.2083271239990627 1.219046680534242 1.0 10.41970860196925 DGLAPEKT(ph)SPDR ddPTM_A549_PD325901_60min_R1 1 DGLAPEKTSPDR 12 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.552)S(0.448)PDR 54.233999999999995 0.0083269 11860000.0 3317.5 3271.9 2940.5 3512.2 4374.0 3107.6 3357.2 2861.8 3940.0 3597.1 3698.4 True False 3654.2901577855814 3547.6344957340493 3140.0600126629456 3729.140617215063 4066.7853294808224 3082.292735921494 3484.96008313033 2804.7191539613304 3774.4155017190774 3369.9784921150726 3243.5202460892347 1.1266432396072197 1.0937605522923712 0.9681024857017517 1.1497201602830593 1.2538183889507741 0.9502924298492864 1.0744375920983393 0.8647145512173159 1.1636787241485396 1.0389879625935157 1.0 11.663344728824853 -7.292092023534925 24.98638693739017 1.05320215609339 1.1104288719881321 0.16072017021413798 0.09756510004773405 1633.932384323325 1331890.510239272 0.015990714468854073 0.025564362822043826 5.1039683949945797e-08 7.292092023534925 0.05722671589474215 DGLAPEKT(ph)SPDRDK ddPTM_A549_PD325901_60min_R1 1 DGLAPEKTSPDRDK 14 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.5)S(0.5)PDRDK 100.35 1.0952000000000001e-05 166530000.0 7607.8 7044.8 6832.0 6596.4 8452.7 7003.3 6444.1 6903.7 6997.7 8442.0 8006.9 True False 8380.138255433652 7638.490019727747 7295.660604153459 7003.844646488643 7859.011512231955 6946.2674467367115 6689.333751846825 6766.000287652121 6703.6110041572565 7908.970679279271 7022.102059921022 1.1933945396868675 1.0877782684653343 1.0389567884229118 0.9974000073942838 1.1191821829374473 0.9892005823132164 0.9526112971251888 0.9635291868327271 0.9546444849354201 1.1262967430251538 1.0 12.777687249304554 -7.36163958791976 5.859237537069105 0.974828894845065 1.079448191435091 0.2804281874502659 0.06584135713679597 0.14410294590818237 7.0112609624091915 0.007298914088084821 0.01172952275880486 4.348709649568782e-08 7.36163958791976 0.10461929659002611 DGLAPEKT(ph)SPDRDKK ddPTM_A549_MK2206_60min_R1 2 DGLAPEKTSPDRDKK 15 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.5)S(0.5)PDRDKK;DGLAPEKT(0.5)S(0.5)PDRDKK 49.606 0.011045999999999999 82819000.0 2799.9 3209.3 3152.2 3032.7 4044.7999999999997 3130.0 2802.95 3193.4 4309.2 3742.5 4336.7 True False 3272.45466901725 3372.6396619713873 3599.2293592761653 3775.711636143077 3449.81527811416 3461.214522474151 3312.209733027526 3646.074229377343 3333.1730803783757 2897.0666507208675 3259.7777031688797 1.0038889050121569 1.0346225936488838 1.1041333756523641 1.1582727351232112 1.0582977099206923 1.061794649098143 1.0160845415341286 1.1185039476259189 1.0225154547005297 0.8887313536455522 1.0 11.670557869526194 -8.9412628379815 9.433834100601413 1.0098915677355624 1.070100449323056 0.3264659275087075 0.05626456405210797 0.3303348395671673 50.10599810637881 0.0076549496829784605 0.00811874232275024 1.1448198789474109e-09 8.9412628379815 0.06020888158749349 DGLAPEKT(ph)SPDRDKK ddPTM_A549_PD325901_60min_R1 2 DGLAPEKTSPDRDKK 15 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.5)S(0.5)PDRDKK;DGLAPEKT(0.5)S(0.5)PDRDKK 72.819 0.00043712 126068000.0 4411.6 4259.8 4190.0 4199.9 5147.4 4680.8 4984.5 4370.299999999999 4122.5 4214.7 5072.8 True False 4859.462384351729 4618.788295769398 4474.3585965168295 4459.31828433504 4785.864381565977 4642.681116714293 5174.18787512306 4283.130938065971 3949.2456613799222 3948.583122714798 4448.87775912867 1.0922894823038416 1.0381917746092457 1.0057274752797771 1.0023467772709527 1.075746433299014 1.0435623022430673 1.163032152210998 0.9627441278370479 0.8876948019703282 0.8875458793203936 1.0 12.11922574309449 -8.492622520846892 24.42119296250698 0.9458223789376053 1.0555014519732149 0.5803284066469663 0.051151545430539375 345.4126948374221 278798.87185074337 0.009283642540651067 0.011214937022017207 3.2164549955290867e-09 8.492622520846892 0.10967907303560953 DGLAPEKTS(ph)PDR ddPTM_A549_PD325901_60min_R1 1 DGLAPEKTSPDR 12 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.082)S(0.918)PDR 59.68 0.0026454 17045000.0 3194.1 2465.7 2883.4 3024.2 3645.8 2517.6 2793.4 2935.7 3152.8 2959.1 2888.9 True False 3518.3626806278603 2673.493192374902 3079.084863292753 3210.9979655434745 3389.731585327203 2497.0975003076182 2899.704365607134 2877.145160487903 3020.2987801573363 2772.2619209968343 2533.5836142459425 1.388690178151082 1.0552220093871265 1.2153081690217535 1.2673739865890108 1.3379197616637852 0.9855990093505623 1.1445070726312534 1.1356030029205146 1.192105428522142 1.094205814013337 1.0 11.306963726653551 -7.258675042502171 24.988397969065915 1.0944819806743928 1.2406359123339445 0.4072303550851174 0.09611790749301338 234.6374320994797 2121013.5717068277 0.015671767899274495 0.026361110429943952 5.512199882455683e-08 7.258675042502171 0.1461539316595517 DGLAPEKTS(ph)PDRDK ddPTM_A549_MK2206_60min_R1 3 DGLAPEKTSPDRDK 14 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.162)S(0.838)PDRDK;DGLAPEKT(0.397)S(0.603)PDRDK;DGLAPEKT(0.155)S(0.845)PDRDK 135.09 1.7202000000000001e-09 260455000.0 25074.2 25362.199999999997 23431.8 22386.800000000003 30314.300000000003 28132.2 22831.4 31480.8 33859.1 31245.5 32208.3 True False 29306.111954667078 26653.02764928512 26754.78158133598 27871.56700498164 25855.1066271104 31109.130731357007 26979.56984557151 35943.29980590661 26190.067911872156 24187.11984905781 24210.09020614159 1.2104916464637019 1.1009057555070079 1.10510871101789 1.1512376355339315 1.0679475543858776 1.284965502667366 1.114393610922084 1.4846413003776644 1.0817831610238398 0.9990512072905059 1.0 14.563320834339033 -8.98481747777472 23.55763556515202 1.0360804183079877 1.1859392772160402 0.30453263504077244 0.11132025181057108 44.188770950579325 68566.82304602164 0.019468565353419596 0.01964746074814573 1.0355773003677056e-09 8.98481747777472 0.1498588589080525 DGLAPEKTS(ph)PDRDK ddPTM_A549_PD325901_60min_R1 2 DGLAPEKTSPDRDK 14 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.099)S(0.901)PDRDK;DGLAPEKT(0.033)S(0.967)PDRDK 139.88 2.1194000000000002e-10 359880000.0 27892.0 28027.0 30336.0 27866.0 34583.0 26403.9 28970.0 27445.3 29841.0 31159.0 32321.0 True False 30723.575306994848 30388.933650765066 32394.783385187235 29587.219531722243 32154.009384873192 26188.875392585134 30072.469202992266 26897.881961078645 28586.886544872817 29191.615422371797 28345.721899699925 1.0838875586132133 1.0720818386031923 1.1428455941187434 1.0437984129109608 1.1343514022556462 0.9239092758072384 1.0609173867366073 0.9489221003527658 1.0085079733028584 1.029842017277423 1.0 14.790843391266497 -7.248005777007922 24.99985862970411 0.9992547758952001 1.0938677926131446 0.5743441565775362 0.04280323546327781 407.3697869984749 758112.4746541976 0.005358737400372935 0.009247960542953685 5.6492946004108524e-08 7.248005777007922 0.09461301671794453 DGLAPEKTS(ph)PDRDKK ddPTM_A549_PD325901_60min_R1 1 DGLAPEKTSPDRDKK 15 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.43)S(0.57)PDRDKK 59.9 0.0010131 36920000.0 5673.6 5783.1 6862.7 6499.5 7579.6 6518.3 6834.9 7015.5 7205.0 6381.5 7770.7 True False 6249.579695316431 6270.462132791212 7328.444090767558 6900.959353564517 7047.235044200471 6465.217125935475 7095.00585970079 6875.57034894672 6902.198906062424 5978.571000926396 6814.953162525859 0.9170392732383973 0.9201034817482385 1.0753476826613115 1.0126202174816974 1.0340841493895931 0.9486810799355869 1.0410938550120767 1.0088947326526296 1.0128021046448732 0.8772725003895008 1.0 12.734488026443287 -5.7265311667726335 22.563734996875855 1.0106329325000047 0.9185705668484772 0.274447655581194 0.0499256664948981 29.853387233390958 19295.179945888955 0.003695873976671989 0.01431138676937313 1.8770197108248046e-06 5.7265311667726335 -0.09206236565152759 DGLGS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 DGLGSSPR 8 0 A0A1W2PR06;P52569;P52569-2;P52569-3 A0A1W2PR06 SLC7A2 Cationic amino acid transporter 2 1 DGLGS(0.988)S(0.012)PR 69.812 0.0068915999999999995 3646300.0 764.52 846.31 481.34 513.7 637.89 648.51 587.3 498.24 751.12 559.36 804.36 True False 842.133507590122 917.6315138252032 514.0066269325563 545.4300823026531 593.086807001034 643.2287495728052 609.650022882891 488.3022123382814 719.5530384901601 524.0419141390253 705.4288192581488 1.1937894860543636 1.3008137586301245 0.728644213137056 0.7731893954605435 0.8407464946282501 0.9118265826582544 0.8642261362727117 0.6922062141603392 1.0200221749472396 0.7428700101735626 1.0 9.462356705929462 -5.743639418291773 24.999397473635504 0.9312518448560279 1.2473018221376546 0.5089370853393991 0.13144610182811456 173.17836439865198 243218.74098458362 0.019292328302061755 0.0743959417062466 1.804515354144288e-06 5.743639418291773 0.31604997728162676 DGLLPENTFIVGYAR ddPTM_A549_MK2206_60min_R1 4 DGLLPENTFIVGYAR 15 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 153.38 2.6039e-14 18526300.0 6612.299999999999 6456.14 6852.299999999999 6307.700000000001 9315.2 7648.799999999999 7029.4 7485.1 10942.0 8759.7 8601.4 False True 7728.294584786152 6784.729949596471 7824.05917726289 7853.086783163417 7944.946419770823 8458.190939137477 8306.5509899726 8546.13584715737 8463.654470783487 6780.877686124136 6465.434993436671 1.1953247681913841 1.0493849147789638 1.2101365469153142 1.214626207074297 1.2288340116072725 1.3082168404328147 1.284762896604006 1.3218191592418613 1.309061877410459 1.0487890904490855 1.0 12.658531722255585 -10.848675868420733 1.1093344410912795 1.0007443224920602 1.2394409232927261 0.5467183335450816 0.07382835867460742 0.30969183754192336 0.6799219838441806 0.05645640795349581 0.013974805858661753 1.4168508386688285e-11 10.848675868420733 0.2386966008006659 DGLLPENTFIVGYAR ddPTM_A549_PD325901_60min_R1 2 DGLLPENTFIVGYAR 15 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 223.22 1.4830999999999997e-53 25302000.0 5411.9 5786.9 6136.0 5923.0 6515.9 6492.1 6580.0 7137.3 7096.8 7340.4 6356.6 False True 5961.312103969793 6274.582372127315 6552.425858765459 6288.8502578910075 6058.24566263468 6439.230490048896 6830.405500714155 6994.940952396466 6798.546175786783 6876.925891279499 5574.778497807383 1.0693361370885743 1.125530346110643 1.1753697230020161 1.1280897098179732 1.0867240133428528 1.1550648142489448 1.2252335233409941 1.2547477814854253 1.2195186191632046 1.2335783195662866 1.0 12.444698768356325 -10.877910248327195 1.163845335282243 1.0012913628088176 1.1650170642789583 0.0 0.08725820599310148 0.320270956734078 0.779919741574484 0.04127263719732789 0.010281204855543204 1.3246152530427983e-11 10.877910248327195 0.16372570147014076 DGLNDDDFEPYLS(ph)PQAR ddPTM_A549_MK2206_60min_R1 2 DGLNDDDFEPYLSPQAR 17 0 S4R3J8;Q9Y5A9 S4R3J8 YTHDF2 YTH domain-containing family protein 2 1 DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR 138.08 1.1446e-12 32077000.0 2647.6 2464.7 1832.61 2120.02 3786.3 2474.7 2482.2 2710.6000000000004 3916.0 3603.9 3526.5 True False 3094.450152394754 2590.1427024151294 2092.5016547500472 2639.424995171316 3229.3402856812827 2736.571111427087 2933.183609882774 3094.83585086435 3029.0322525670017 2789.7764869827456 2650.7727235513335 1.167376638857597 0.977127416244507 0.7893930838199698 0.9957190866349286 1.2182637375847227 1.0323673120345098 1.1065390796511156 1.1675221430217864 1.142697835108587 1.0524389594763839 1.0 11.372197263934924 -6.540948109493773 24.97844956138875 1.086352771662762 0.9636608903472107 0.23760387183775433 0.10051834864940894 268.9998249595796 371854.9294455922 0.01501831335988295 0.03126723487442682 2.8777422334735647e-07 6.540948109493773 -0.1226918813155512 DGLNDDDFEPYLS(ph)PQAR ddPTM_A549_PD325901_60min_R1 2 DGLNDDDFEPYLSPQAR 17 0 S4R3J8;Q9Y5A9 S4R3J8 YTHDF2 YTH domain-containing family protein 2 1 DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR 344.39 3.300899999999998e-219 37448000.0 11105.9 10418.7 10561.0 9813.3 14073.3 10234.8 9857.599999999999 10064.900000000001 10275.9 12527.3 13471.3 True False 12233.362792268543 11296.720413430827 11277.732968452085 10419.445253378666 13084.839958249315 10151.451182137125 10232.736362285697 9864.147673738691 9844.039658404834 11736.324140077606 11814.415501606622 1.035460687039909 0.9561810664179371 0.9545739242807607 0.8819264272499765 1.1075317231284045 0.8592427768226576 0.8661229462341294 0.8349247300805768 0.8332227402249531 0.9933901629311754 1.0 13.528260635709076 DGLNQTTIPVS(ph)PPSTTK ddPTM_A549_MK2206_60min_R1 1 DGLNQTTIPVSPPSTTK 17 0 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DGLNQT(0.001)T(0.004)IPVS(0.995)PPSTTK 123.36 5.0269e-10 2185700.0 1663.8 1086.1 1472.2 1325.0 1818.0 1503.1 1445.3 1014.1 1939.7 1884.4 1641.9 True False 1944.6087639954642 1141.3778508918217 1680.9800973054919 1649.6250594815103 1550.574608290038 1662.1570443229707 1707.892301733775 1157.851780550999 1500.3610470644053 1458.7127312273612 1234.1709158652864 1.5756397586407913 0.9248134405205889 1.362031851258579 1.3366261011951865 1.2563694285429816 1.3467802740738062 1.3838377487095124 0.9381616157590462 1.2156833610136495 1.1819373738884837 1.0 10.269326486602028 -10.56232311507845 0.2573638469965343 0.8759842778764685 1.314989376198077 0.1436653161006224 0.18081824573899336 4.6714498311931365 0.4450344431712515 0.6443399314492826 0.12295013141506946 2.7395351994373025e-11 10.56232311507845 0.4390050983216086 DGLNQTTIPVS(ph)PPSTTK ddPTM_A549_PD325901_60min_R1 2 DGLNQTTIPVSPPSTTK 17 0 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DGLNQTTIPVS(0.96)PPS(0.025)T(0.014)T(0.002)K;DGLNQTT(0.001)IPVS(0.996)PPS(0.003)T(0.001)TK 147.92 1.7519e-16 10177700.0 3031.7 3620.2 3746.8 4055.6000000000004 4030.8999999999996 3906.7 3853.7 3972.2999999999997 4105.3 3902.4 3934.6000000000004 True False 3339.4759521804194 3925.286959093006 4001.080379338728 4306.10520106412 3747.783489850079 3874.8851304622553 4000.354662325553 3893.069360290932 3932.7685175653123 3656.001798012249 3450.6691434844 0.9677763394053768 1.137543704097156 1.1595085512308887 1.2479043982512683 1.0861034002424412 1.122937311384624 1.1592982392644269 1.1282070805431688 1.1397118512481033 1.0595051701538991 1.0 11.75266043680788 -10.658046168865845 0.765181800285863 0.9931295277995131 1.1328441991932618 0.22841351394556386 0.06567338031567292 0.6319203308106135 0.6083809506930605 0.053980467342603936 0.01192955328449595 2.1976262356828948e-11 10.658046168865845 0.1397146713937487 DGLNQTTIPVS(ph)PPSTTKPSR ddPTM_A549_MK2206_60min_R1 5 DGLNQTTIPVSPPSTTKPSR 20 1 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DGLNQTTIPVS(0.997)PPS(0.001)T(0.001)TKPSR;DGLNQTTIPVS(0.996)PPS(0.001)T(0.002)TKPSR;DGLNQTTIPVS(0.996)PPS(0.001)T(0.002)TKPSR;DGLNQTTIPVS(0.989)PPS(0.004)T(0.006)T(0.001)KPSR;DGLNQT(0.001)T(0.001)IPVS(0.864)PPS(0.032)T(0.032)T(0.032)KPS(0.037)R 187.29 2.1849e-44 787387600.0 50599.5 58955.4 57501.8 53294.7 77583.9 59437.6 54738.5 58906.1 83761.6 82039.4 83018.3 True False 59139.45856099797 61955.97804112669 65656.41988808641 66351.90389248997 66171.41108477087 65727.24738051424 64683.776903379374 67256.22006736539 64789.73133978966 63506.64256116219 62402.5649214807 0.947708778243513 0.9928434531350445 1.0521429683331116 1.0632880872120978 1.0603956931583245 1.0532779776475036 1.0365563816931092 1.077779737932117 1.0382542996640067 1.0176928246630683 1.0 15.929317708692277 -5.490765155745999 3.374402330641837 1.0334399088168298 0.9508100117792803 0.6020386426276065 0.02302445338432835 0.17523650850270234 3.803454891865834 0.0040720652148611225 0.027347209976440686 3.230240398394022e-06 5.490765155745999 -0.08262989703754953 DGLNQTTIPVS(ph)PPSTTKPSR ddPTM_A549_PD325901_60min_R1 4 DGLNQTTIPVSPPSTTKPSR 20 1 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DGLNQTTIPVS(0.995)PPS(0.001)T(0.002)T(0.001)KPSR;DGLNQTTIPVS(0.996)PPS(0.001)T(0.002)T(0.002)KPSR;DGLNQT(0.001)T(0.001)IPVS(0.981)PPS(0.005)T(0.005)T(0.005)KPS(0.001)R;DGLNQT(0.008)T(0.008)IPVS(0.958)PPS(0.008)T(0.008)T(0.008)KPS(0.002)R 171.72 6.026199999999999e-35 1277195600.0 44216.9 45128.7 48716.1 50492.0 56479.799999999996 53801.0 52224.700000000004 54324.6 58642.600000000006 56988.3 60986.1 True False 48705.76713723867 48931.85392818639 52022.26749970733 53610.77616434794 52512.85369273228 53362.86249366467 54212.1395369524 53241.053236175765 56178.055457134804 53390.04901231586 53485.19632274028 0.9106401487869356 0.9148672397670915 0.972647967594522 1.002347936443009 0.9818203410128534 0.9977127534815909 1.0135914844516154 0.9954353147534262 1.0503477470316325 0.9982210533574508 1.0 15.706852015976738 -5.379570844750017 0.5446355648386542 1.0213451929098334 0.8277717144958867 0.7744021888144029 0.018489586808027314 1.1939375340314136 0.2540531522365774 0.004089727398990456 0.1421165544334203 4.172815234200207e-06 5.379570844750017 -0.19357347841394668 DGLPRT(ph)PSR ddPTM_A549_MK2206_60min_R1 2 DGLPRTPSR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGLPRT(0.949)PS(0.051)R;DGLPRT(0.998)PS(0.002)R 78.705 0.00071736 383500000.0 9322.8 8680.1 8098.8 7091.3 9641.400000000001 7598.1 6478.6 6975.299999999999 9377.900000000001 10089.900000000001 9677.4 True False 10896.26071942356 9121.880014295277 9247.331620742912 8828.668818340555 8223.162831885355 8402.125898789413 7655.677759643285 7964.07013596034 7253.820623429029 7810.584582260115 7274.234497347415 1.4979254137871052 1.253998619046666 1.2712446408092835 1.2136904332077791 1.1304506109727384 1.155052934003336 1.052437581223834 1.0948327468497856 0.9971936739287371 1.0737328560288073 1.0 12.82857971893887 -2.0000000000002887 0.24651115680150287 0.9779026937689533 3.986648858317043 0.8847781758084039 0.04740234953911188 7.386161712367377 0.08932613768235925 0.01859232715261194 9.318763036761561 0.009999999999993353 2.0000000000002887 3.0087461645480897 DGLPRT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 DGLPRTPSR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGLPRT(0.997)PS(0.003)R;DGLPRT(0.82)PS(0.18)R 72.846 0.0009763 483100000.0 8404.0 8448.3 9237.099999999999 8880.2 10501.0 7590.5 8407.2 7938.1 9268.2 9764.5 10154.0 True False 9257.167893302189 9160.26789031143 9863.985153194662 9428.709785602521 9763.445986483346 7528.685484622252 8727.140596596366 7779.768368181018 8878.689785033686 9147.967803579999 8905.122371509327 1.0395329235361415 1.028651545499072 1.1076754188974516 1.058796206525846 1.096385381263272 0.8454331305664267 0.9800135509106097 0.87362846276782 0.9970317548290848 1.0272703082495105 1.0 13.120419721205897 DGLPRTPS(ph)RR ddPTM_A549_MK2206_60min_R1 3 DGLPRTPSRR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGLPRT(0.355)PS(0.645)RR;DGLPRT(0.388)PS(0.612)RR;DGLPRT(0.358)PS(0.642)RR 67.118 0.00097361 758826000.0 2809.85 2988.42 2869.0699999999997 2759.6 3762.81 2851.98 2661.0699999999997 2549.4399999999996 3994.01 4211.400000000001 4032.0700000000006 True False 3284.0839857631067 3140.5178134261478 3275.9472678822626 3435.7021238831503 3209.3056335642664 3153.7746306088943 3144.551973551993 2910.8309273325503 3089.373112123372 3260.041815055673 3030.7957395291696 1.0835715330236293 1.036202398091672 1.0808868526359936 1.1335973846976841 1.0588986884556029 1.0405764365693708 1.037533454511354 0.9604180477648238 1.0193273904375035 1.0756389064880092 1.0 11.565480909632148 -7.561321536288655 1.7406317410026377 1.0060977444654735 1.0797790914748162 0.4068100935746817 0.03417420530952979 0.1819390731605464 1.1082610705161409 0.004392837145373014 0.007336924259537328 2.7458604622972706e-08 7.561321536288655 0.0736813470093427 DGMDNQGGYGS(ph)VGR ddPTM_A549_MK2206_60min_R1 4 DGMDNQGGYGSVGR 14 0 P31942-4;P31942-3;P31942-2;P31942 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 1 DGMDNQGGY(0.004)GS(0.996)VGR;DGMDNQGGY(0.001)GS(0.999)VGR;DGMDNQGGYGS(1)VGR;DGMDNQGGYGS(1)VGR 98.421 3.8774e-05 19739900.0 2406.39 2341.63 2121.79 2189.31 2582.74 2470.51 2049.22 2580.4700000000003 3855.44 3763.0 3900.15 True False 2812.5298014130562 2460.8089650896018 2422.691727117118 2725.6910482818603 2202.8223673349885 2731.937728408186 2421.536748466675 2946.2595248579387 2982.1889958725524 2912.9356864829992 2931.635116335949 0.9593723945182665 0.8393981063254554 0.8263960660101094 0.929751125265724 0.7513971827736005 0.9318819088995799 0.8260020952038495 1.0049884818340789 1.0172442604657388 0.9936215016156851 1.0 11.517489835401467 -8.27204769940406 24.267502905956327 1.008134059839885 0.8642854246309162 0.5822669669021946 0.05602807312910332 216.23976842000386 494667.33265001926 0.008192792365942253 0.009960233164040756 5.345056503821912e-09 8.27204769940406 -0.14384863520896873 DGMDNQGGYGS(ph)VGR ddPTM_A549_PD325901_60min_R1 2 DGMDNQGGYGSVGR 14 0 P31942-4;P31942-3;P31942-2;P31942 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 1 DGMDNQGGY(0.001)GS(0.999)VGR;DGMDNQGGYGS(1)VGR 103.6 1.3685e-09 17065000.0 757.25 858.22 1002.4 847.46 857.39 906.37 681.41 755.83 843.03 836.92 1119.8 True False 834.1254625420137 930.5452113233516 1070.4288919208764 899.8056794786962 797.1698842349258 898.9888232260156 707.3414304318591 740.7543777128355 807.6003808157948 784.0767283703395 982.0716989970598 0.8493529173011134 0.9475328657507088 1.089970205855694 0.9162321655309101 0.8117226930060556 0.915400397083133 0.7202543675316487 0.7542772879712658 0.8223436044848418 0.7983905138199965 1.0 9.939684546301905 -4.950990233089103 12.37461133282914 0.8980782990303602 0.6524635492890571 0.0 0.10690551552828244 936412.4056934654 8471653.218110625 0.015906921015896185 5065150.071436029 1.1194630589493679e-05 4.950990233089103 -0.24561474974130304 DGNEVEPDDDHFS(ph)IGVGSR ddPTM_A549_MK2206_60min_R1 2 DGNEVEPDDDHFSIGVGSR 19 0 H3BV98;F8VSA1;Q15633-2;Q15633 H3BV98 TARBP2 RISC-loading complex subunit TARBP2 1 DGNEVEPDDDHFS(1)IGVGSR;DGNEVEPDDDHFS(0.999)IGVGS(0.001)R 131.43 4.6845e-17 7462900.0 858.1 759.29 796.14 533.54 1150.25 578.38 813.97 642.7 994.21 978.8 1058.96 True False 1002.9263014692312 797.9346178101936 909.0446234674599 664.2573239515209 981.049748726961 639.5837877024286 961.8578128016607 733.804693186202 769.0230224271298 757.6884001938766 795.9910061908173 1.2599719012764912 1.0024417507286638 1.1420287621309393 0.8345035544186579 1.2324884842879504 0.8035062993527161 1.208377739598582 0.921875608491853 0.9661202406133436 0.9518806045557773 1.0 9.636608319793385 -2.0000008721967717 0.9245452765628268 0.9932617797211934 151.79950142301414 0.22853112871553471 0.13275893181562273 994.6572559283741 1.8528688434897047 0.016829948764393213 316965.73169100593 0.00999997991694732 2.0000008721967717 150.80623964329294 DGNEVEPDDDHFS(ph)IGVGSR ddPTM_A549_PD325901_60min_R1 3 DGNEVEPDDDHFSIGVGSR 19 0 H3BV98;F8VSA1;Q15633-2;Q15633 H3BV98 TARBP2 RISC-loading complex subunit TARBP2 1 DGNEVEPDDDHFS(1)IGVGSR;DGNEVEPDDDHFS(0.996)IGVGS(0.004)R;DGNEVEPDDDHFS(0.968)IGVGS(0.032)R 145.2 3.3857e-21 11460110.0 844.0999999999999 1002.51 953.3600000000001 1315.53 1582.0900000000001 1325.29 968.31 1363.3600000000001 1058.23 1155.8600000000001 1266.96 True False 929.7924106064231 1086.9950360091514 1018.0607426193995 1396.7873003145976 1470.969456314201 1314.4972776384996 1005.1595669295627 1336.16671526477 1013.7562731939538 1082.8788023396983 1111.1319519211604 0.8367974739622966 0.978277183128182 0.9162374827392555 1.2570849914805668 1.323847679630558 1.183025360188516 0.9046266423997886 1.2025274882560273 0.9123635329189815 0.9745726423107426 1.0 10.117814438093335 -8.787916808823512 24.966699192407063 0.9586161087952815 1.0790124713266411 0.1006464508592585 0.15001732064404236 366.5135257689457 345599.433313461 0.027343227281627344 0.029113006282080196 1.6296081619488396e-09 8.787916808823512 0.12039636253135966 DGPEPPS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 DGPEPPSPAK 10 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 DGPEPPS(1)PAK;DGPEPPS(1)PAK 112.64 0.0001286 38523000.0 12435.3 13391.8 12531.3 12069.5 17658.7 13167.6 12741.8 13298.5 19170.9 19164.4 20308.8 True False 14534.074626104582 14073.385418997423 14308.426771745897 15026.528041820444 15061.128622338445 14560.986692054525 15056.820127469317 15183.603099948203 14828.721759636548 14835.148729746152 15265.564465634285 0.9520823588818856 0.9219040311728606 0.9373008645672364 0.9843414618337921 0.9866080390439499 0.9538452852388197 0.9863258028463414 0.9946309639666064 0.9713837829592772 0.9718047939296918 1.0 13.89799331575089 -2.00000000031649 0.20098154596064796 0.9949556882236494 0.6859308254201029 0.47184297545791076 0.017275459733186196 27.06517204404277 0.30151494975774457 0.013483339363013113 2.671825646399948 0.00999999999271255 2.00000000031649 -0.3090248628035466 DGPEPPS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 DGPEPPSPAK 10 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 DGPEPPS(1)PAK;DGPEPPS(1)PAK 95.13799999999999 0.00056355 55257000.0 19836.7 20182.5 19818.5 20903.8 24604.0 21200.1 20716.0 20517.0 21044.0 22488.0 26474.0 True False 21850.50718099328 21883.35010548992 21163.502588321917 22194.98025002567 22875.89991919209 21027.45341447075 21504.358716230174 20107.772339724877 20159.593862481288 21068.103842173903 23217.86583251309 0.9411074789826277 0.9425220329616005 0.9115179982944708 0.9559440307793051 0.9852714321037152 0.9056583221798534 0.9261987674214479 0.866047400083043 0.8682793676174511 0.9074091475139472 1.0 14.50294774648364 DGPGLERS(ph)PGEPGGAAPER ddPTM_A549_MK2206_60min_R1 4 DGPGLERSPGEPGGAAPER 19 1 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 DGPGLERS(1)PGEPGGAAPER;DGPGLERS(1)PGEPGGAAPER;DGPGLERS(1)PGEPGGAAPER;DGPGLERS(1)PGEPGGAAPER 120.85 9.7226e-15 119705700.0 3326.64 4751.67 4859.88 4058.4 4514.75 3673.6299999999997 3976.4 4141.93 6049.9 6301.089999999999 6369.3099999999995 True False 3888.0955034606736 4993.509706976469 5549.084061467882 5052.708182188497 3850.6362556531626 4062.3710882417663 4698.860408644696 4729.061261628636 4679.607309705081 4877.669392702934 4787.634542986737 0.812112008247628 1.04300143675154 1.1590450381382116 1.0553663060164145 0.8042878421649465 0.8485131961863323 0.9814576209723268 0.9877657158598492 0.9774361989596926 1.0188057064313913 1.0 12.225097315150824 -4.012157455583703 0.003318115494150112 1.921825836974791 2.0266299734201135e-06 0.013764573445969819 0.10340419427703217 478103.8207191616 170.6798633605187 47715.44328102061 51195.363620983444 9.7239461344829e-05 4.012157455583703 -1.9218238103448175 DGPGLERS(ph)PGEPGGAAPER ddPTM_A549_PD325901_60min_R1 4 DGPGLERSPGEPGGAAPER 19 1 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 DGPGLERS(1)PGEPGGAAPER;DGPGLERS(1)PGEPGGAAPER;DGPGLERS(1)PGEPGGAAPER;DGPGLERS(1)PGEPGGAAPER 122.22 2.2678e-14 154410500.0 5487.85 5056.33 5951.89 5392.639999999999 6341.49 6125.589999999999 5721.7 5756.32 6386.110000000001 6686.62 5544.97 True False 6044.972492058355 5482.444674291679 6355.821047022093 5725.731125225964 5896.08561935285 6075.705225972889 5939.442424534374 5641.505681854319 6117.724004995739 6264.425672054293 4862.973842460911 1.243060869313517 1.1273851869039222 1.3069823636570757 1.1774135150043197 1.21244444456422 1.2493806100545 1.2213601423627471 1.1600937748411642 1.2580211621907185 1.2881882311100763 1.0 12.247623116120783 -10.81895996280155 0.8524848492001901 0.9868017581054657 1.2184766042510746 0.0 0.0969902670976235 0.26096962565259074 0.3040746415039883 0.04093851630459361 0.008088877405450352 1.5171902293478654e-11 10.81895996280155 0.23167484614560896 DGPHGS(ph)VLEEGLDDYLTR ddPTM_A549_MK2206_60min_R1 1 DGPHGSVLEEGLDDYLTR 18 0 Q8N960;Q8N960-2 Q8N960 CEP120 Centrosomal protein of 120 kDa 1 DGPHGS(1)VLEEGLDDYLTR 53.585 0.003961500000000001 1060500.0 0.0 0.0 0.0 184.02 0.0 0.0 0.0 193.57 110.22 238.15 105.65 True False 0.0 0.0 0.0 229.10490826097174 0.0 0.0 0.0 221.00914028326298 85.25534598517235 184.3517495976418 79.41418920833638 0.0 0.0 0.0 2.884936691350389 0.0 0.0 0.0 2.7829930958995788 1.0735530619284193 2.3213956024157176 1.0 6.3113248966083235 DGPIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DGPISPK 7 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 DGPIS(1)PK;DGPIS(1)PK 85.86200000000001 0.013412 93004000.0 8332.3 10004.7 9483.4 9135.1 12025.4 9580.5 8488.900000000001 10966.8 12126.3 12986.599999999999 11152.5 True False 9738.588534823533 10513.896496471232 10828.288720817074 11373.199910090227 10256.479589951052 10594.302150978798 10031.223247898597 12521.377484416427 9379.712411721974 10052.918040414592 8383.026456658507 1.1617031850219588 1.2541886335238999 1.291692060952084 1.3566937870101403 1.223481715461424 1.263780116375979 1.1966111880669246 1.4936583522852769 1.1188933328812072 1.199199130813874 1.0 13.033255467221682 -8.965492275309254 10.40217644488631 1.052285753298432 1.278953305643817 0.38001510901255153 0.095858795510715 0.20945788328960113 61.31880847995139 0.015102014273518169 0.01585136419593911 1.0826989726603882e-09 8.965492275309254 0.22666755234538494 DGPIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DGPISPK 7 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 DGPIS(1)PK;DGPIS(1)PK 83.456 0.014500999999999998 175972000.0 25775.0 28086.0 28487.0 27850.0 34170.0 24946.0 28034.0 29055.0 26045.0 30582.0 28942.0 True False 28391.659025447865 30452.905787825555 30420.299126247006 29570.231248060896 31770.01708010055 24742.848046819956 29100.84921079341 28475.475231793447 24950.41922392723 28651.047300843213 25382.31747845411 1.1185605510429946 1.1997685323129235 1.1984839111743602 1.1649933570156354 1.2516594320856897 0.9748064993601561 1.146500875481358 1.1218627005183817 0.9829842860135407 1.12877980212657 1.0 14.631536176941108 -8.103650469928015 0.7280614786613457 0.9888199606082893 1.1820933503428328 0.2323948910123227 0.07784081455523383 0.3053348388818487 0.328211973995165 0.014285072676004977 0.021481530015454893 7.876794770075705e-09 8.103650469928015 0.19327338973454355 DGPIS(ph)PKK ddPTM_A549_PD325901_60min_R1 1 DGPISPKK 8 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 DGPIS(1)PKK 49.3 0.014083000000000002 17594000.0 4193.6 5054.9 4711.6 4742.0 5553.4 4405.3 4802.4 5009.1 4600.8 5603.4 5377.0 True False 4619.3311848348485 5480.894163173096 5031.357509152435 5034.902570136618 5163.348342189943 4369.42469737256 4985.157959974116 4909.189570937068 4407.444375712975 5249.600367717772 4715.66308761135 0.9795719284887892 1.1622743315933883 1.0669459237600019 1.067697686750343 1.094935801447461 0.9265769450009262 1.0571488817915689 1.0410390818279909 0.934639369655541 1.1132263417013704 1.0 12.203244932751742 -7.404565051520599 0.8844189543666591 0.9740355163868045 1.0825562306007628 0.0 0.07195927938899373 0.45363082026658574 0.7052005997188117 0.010394045840611432 0.022976570188334086 3.939444156063748e-08 7.404565051520599 0.10852071421395826 DGPS(ph)SAPATPTK ddPTM_A549_MK2206_60min_R1 1 DGPSSAPATPTK 12 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPS(0.5)S(0.5)APAT(0.001)PTK 133.88 4.7877e-08 12371000.0 4644.1 5144.2 4280.3 4638.6 6218.5 4553.7 3864.9 4885.3 6192.6 6211.9 6913.9 True False 5427.910542656172 5406.017807345284 4887.310902388735 5775.057208234665 5303.766887597138 5035.569511498582 4567.1023019240765 5577.806235603782 4789.985987550154 4808.627475648085 5196.987816067363 1.0444339557377587 1.0402213741259254 0.9404122301920335 1.1112316235147026 1.020546338630937 0.9689400263610914 0.8787979621203095 1.0732767581942475 0.9216850523953714 0.9252720317683646 1.0 12.343459961385856 -7.238137855306991 5.147577958762123 0.9646148932682337 1.0317752206224549 0.25677243167571207 0.05936837915389225 0.22138416722825963 17.357131143826706 0.008550961356685302 0.01465599128515572 5.779125752124745e-08 7.238137855306991 0.06716032735422117 DGPSS(ph)APAT(ph)PTKAPYSPTTSK ddPTM_A549_PD325901_60min_R1 2 DGPSSAPATPTKAPYSPTTSK 21 1 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 2 DGPS(0.184)S(0.802)APAT(0.581)PT(0.428)KAPY(0.002)S(0.002)PT(0.001)TSK;DGPS(0.253)S(0.747)APAT(0.639)PT(0.361)KAPYSPTTSK 109.26 2.383e-10 14398000.0 4424.6 4946.7 4710.2 4661.5 5903.5 5785.200000000001 5807.200000000001 5897.3 5581.3 6000.9 5743.4 True False 4873.782134781633 5363.575769445159 5029.862496733551 4949.430267965382 5488.8585259693755 5738.08724927695 6028.196173821774 5779.673725157648 5346.737370493573 5622.0021498800015 5036.998210412317 0.9675965587414168 1.0648357504590236 0.9985833400408967 0.9826150538894539 1.089708254138941 1.1391878673721514 1.196783465469669 1.147444069606794 1.0614928072519407 1.116141383226697 1.0 12.298348503085279 -5.257188719483126 23.126043677285946 1.0549791566019058 0.9675964636417967 0.09236106180232706 0.06893712403462102 291.1907128069302 1584059.3461800816 0.01047366541283727 0.11053439867168408 5.53109707218852e-06 5.257188719483126 -0.08738269296010903 DGPSS(ph)APATPTK ddPTM_A549_MK2206_60min_R1 1 DGPSSAPATPTK 12 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPS(0.034)S(0.966)APATPTK 149.83 3.7535e-12 12089000.0 3263.7 3954.1 3140.1 3389.4 3465.3 3344.2 2998.5 2770.8 4060.1 4879.6 4601.0 True False 3814.5327701959363 4155.346800673374 3585.41339732983 4219.803152155945 2955.5589604551537 3698.0810242997 3543.288636787326 3163.5693852191175 3140.4938326474175 3777.2949709706163 3458.4447188599675 1.1029619034805185 1.201507364860564 1.0367126523021932 1.2201447457419385 0.8545919338648317 1.0692901939802368 1.0245323909515391 0.9147375894046235 0.9080653553666289 1.0921946938668299 1.0 11.75590768066399 -6.756893389541097 24.999994449682298 0.9604460169246879 1.1373000001993818 0.4593424086082637 0.08157387074470716 61.79954631744336 339853.2020200677 0.010047373258329701 0.02037743662675113 1.7502762931107545e-07 6.756893389541097 0.17685398327469393 DGPSS(ph)APATPTK ddPTM_A549_PD325901_60min_R1 2 DGPSSAPATPTK 12 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPS(0.09)S(0.91)APATPTK;DGPS(0.355)S(0.645)APATPTK 178.36 2.8355999999999997e-16 31290000.0 13683.9 13618.900000000001 13701.6 14599.8 16083.0 16502.0 15513.2 13900.2 17275.9 16344.8 15505.099999999999 True False 15073.079454445235 14766.6124985337 14631.472970414088 15501.596487448447 14953.385563337928 16367.613183220656 16103.563315148764 13622.94960650406 16549.85400156056 15312.786538578981 13598.07099492705 1.1084718898782377 1.0859343581926135 1.0759962185719256 1.139984965016842 1.0996696199715752 1.203671696472744 1.1842535107484307 1.0018295691783263 1.2170736575603052 1.1260999111044228 1.0 13.731114386654676 -3.731681887959658 16.345404834078003 1.1087956070804268 0.39326701347243864 0.0 0.06918470743502156 0.0 0.0 0.01111878562156074 0.0 0.0001854889795692486 3.731681887959658 -0.7155285936079882 DGPSSAPAT(ph)PTKAPYSPTTSK ddPTM_A549_MK2206_60min_R1 1 DGPSSAPATPTKAPYSPTTSK 21 1 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPS(0.005)S(0.024)APAT(0.842)PT(0.129)KAPYSPTTSK 97.346 3.1267e-07 4945300.0 1212.5 1535.9 743.73 1048.2 1761.3 1900.5 1971.8 1764.3 2381.7 2500.9 2330.7 True False 1417.1403572211202 1614.0707496406867 849.2020973841966 1305.009047055487 1502.215103180002 2101.6096485502003 2330.0505366073885 2014.3949279421442 1842.2487527933672 1935.9449530495162 1751.922865952387 0.8089056800173271 0.9213138209502388 0.48472573415642367 0.7449009727640338 0.857466462921792 1.1996017001625898 1.3299960756780909 1.1498194167624334 1.051558141397896 1.105040062364327 1.0 10.774723541702949 -7.044694042674322 4.318956574062658 1.071466399059685 0.7392749192129453 0.6481251259657406 0.13474193094561857 0.13128135966512297 5.316268789457837 0.02181069058693044 0.03963369978633533 9.022065117424981e-08 7.044694042674322 -0.3321914798467398 DGPSSAPAT(ph)PTKAPYSPTTSK ddPTM_A549_PD325901_60min_R1 2 DGPSSAPATPTKAPYSPTTSK 21 1 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPSS(0.001)APAT(0.834)PT(0.165)KAPYSPTTSK;DGPS(0.059)S(0.054)APAT(0.836)PT(0.049)KAPY(0.001)SPTTSK 110.68 1.2021e-10 3276200.0 1603.1 1432.7 1571.3 1554.5 1873.9 1840.1 1791.1 1555.6 1680.6 2147.1 2042.4 True False 1765.845531860154 1553.4386570610875 1677.9378669944854 1650.5179344743492 1742.2837286040499 1825.1148356832098 1859.2612906275276 1524.5723376554085 1609.9702264439284 2011.5317395736208 1791.1977478403232 0.9858462216074486 0.8672625113190848 0.9367686337355007 0.9214604788691846 0.972692004947388 1.0189354234527042 1.0379988992668563 0.8511468594093593 0.8988232753112246 1.1230093059233455 1.0 10.80670890399603 -6.744893415622712 23.805792408074133 0.9563311476888358 0.9241460308531372 0.0369768306135444 0.075151516065329 368.2036052186177 529752.9825316385 0.00893534859556963 0.01855109813638182 1.7993124474842853e-07 6.744893415622712 -0.03218511683569858 DGPSSAPATPT(ph)KAPYSPTTSK ddPTM_A549_MK2206_60min_R1 1 DGPSSAPATPTKAPYSPTTSK 21 1 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPS(0.001)S(0.006)APAT(0.131)PT(0.793)KAPY(0.048)S(0.013)PT(0.003)T(0.003)S(0.001)K 56.298 0.0023605 5105900.0 963.25 1118.2 1112.7 978.79 1466.9 1082.0 1400.0 1136.9 2045.5 1772.0 2154.7 True False 1125.8230507985522 1175.1116037816362 1270.497591544505 1218.5935939395524 1251.1209531906802 1196.4965218265288 1654.3618781064727 1298.0590566102267 1582.1975159922893 1371.7039692925514 1619.6285233052763 0.6951118942391897 0.7255439052058141 0.784437649289926 0.7523907960404975 0.7724740180775775 0.7387474995715463 1.0214452600095694 0.8014548014758329 0.9768891404575913 0.8469250507475814 1.0 10.661447240339552 -7.899683611929039 0.611725560009471 0.9983192491265648 0.7200960763761343 0.48807171580248987 0.07986365736118733 0.2524873852702805 0.1946706909628443 0.014709421398888896 0.026467233726132564 1.259842886274026e-08 7.899683611929039 -0.2782231727504305 DGQDAIAQS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 DGQDAIAQSPEK 12 0 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK 204.67 5.2676000000000005e-25 183702000.0 12044.199999999999 13760.800000000001 13662.099999999999 13098.5 18561.6 14260.400000000001 13111.599999999999 15242.0 18524.6 16228.9 17564.4 True False 14076.96650758154 14461.165942870995 15599.591215458071 16307.633088014014 15831.21322840283 15769.426062712599 15493.808000700583 17402.60017666733 14328.80767770752 12562.780218539436 13202.674727221043 1.0662208074063884 1.0953209286490424 1.181547795258116 1.2351764642350251 1.1990913625829402 1.1944114649889443 1.1735355388825661 1.3181117111661438 1.085295818745321 0.9515329641983618 1.0 13.688542614041722 DGQDAIAQS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 DGQDAIAQSPEK 12 0 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK 222.07 5.003099999999999e-40 230070000.0 18131.6 20567.5 17811.800000000003 20818.4 23036.4 19919.7 19407.7 21209.3 23138.1 20017.9 24082.0 True False 19972.306684221545 22300.795406647536 19020.615859054527 22104.305285983144 21418.402735265663 19757.480567555478 20146.27064380093 20786.263873126027 22165.68612191019 18753.966377723824 21120.06666837577 0.9456554753270344 1.0559055403001987 0.9005944989527488 1.0466020601668427 1.014125716152999 0.9354838163053449 0.9538923792303668 0.984194993297556 1.0495083405726215 0.8879690898800601 1.0 14.366326768316995 -8.661134583914032 8.188649336462712 1.0233426099179104 0.9803254804582745 0.0 0.06110798603613034 0.3370741360161635 24.74034204462435 0.00751516192250716 0.008518419648084459 2.1820536084706995e-09 8.661134583914032 -0.04301712945963587 DGQDAIAQS(ph)PEKESK ddPTM_A549_MK2206_60min_R1 7 DGQDAIAQSPEKESK 15 1 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEKESK;DGQDAIAQS(1)PEKESK;DGQDAIAQS(0.994)PEKES(0.006)K;DGQDAIAQS(1)PEKESK;DGQDAIAQS(1)PEKESK;DGQDAIAQS(1)PEKESK;DGQDAIAQS(0.994)PEKES(0.006)K 210.09 1.9189999999999998e-45 1443708300.0 35482.97 36625.9 38047.8 32522.100000000002 50867.3 37748.9 38945.5 41235.9 51912.5 50817.0 51787.0 True False 41471.627860673245 38490.00186813256 43443.55016048084 40490.015959972545 43384.78755350485 41743.463542308185 46021.3932312826 47081.215104647425 40154.40163722791 39337.404406060734 38926.858651510775 1.0653730944986928 0.9887774971186569 1.11603020807318 1.0401562664600243 1.114520643494593 1.0723563366880646 1.182252943739566 1.209478923694763 1.0315346017696059 1.010546593503096 1.0 15.248478305258384 -8.976734780389581 24.655255773226326 1.0139122332062995 1.0975607939413283 0.2988733637641453 0.05825684480215862 132.26642686731114 140170.78106589336 0.010789322191324585 0.011126954703677848 1.0550309973387854e-09 8.976734780389581 0.0836485607350288 DGQDAIAQS(ph)PEKESK ddPTM_A549_PD325901_60min_R1 3 DGQDAIAQSPEKESK 15 1 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(0.982)PEKES(0.018)K;DGQDAIAQS(1)PEKESK;DGQDAIAQS(1)PEKESK 211.29 1.7123e-45 1879182000.0 44115.0 45082.7 48265.2 43581.9 54524.1 44703.9 47735.8 48462.4 48826.4 46495.1 45912.6 True False 48593.522324253456 48881.977346749416 51540.766714225305 46273.854981323675 50694.51531393358 44339.84625993082 49552.41199103207 47495.77941398267 46774.396206379766 43559.39145109658 40265.641263951045 1.2068235050749876 1.2139873056116552 1.2800185243881521 1.1492144053533715 1.2590018120317206 1.1011831643080603 1.2306375966100724 1.1795609835848961 1.1616453814745493 1.0818005148745602 1.0 15.297261689249947 -11.035569914352616 0.2864868750606799 0.8783429674123041 1.2274652032449387 0.5786680351435933 0.0514083718568123 1.6784491349398072 0.15137101984613086 0.1967088078098316 0.022022625374060266 9.213615525611602e-12 11.035569914352616 0.3491222358326346 DGQDAIAQS(ph)PEKESKDYEMNANHK ddPTM_A549_MK2206_60min_R1 6 DGQDAIAQSPEKESKDYEMNANHK 24 2 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(0.999)PEKES(0.001)KDYEMNANHK;DGQDAIAQS(1)PEKESKDYEMNANHK;DGQDAIAQS(0.978)PEKES(0.022)KDYEMNANHK;DGQDAIAQS(0.998)PEKES(0.002)KDYEMNANHK;DGQDAIAQS(1)PEKESKDYEMNANHK;DGQDAIAQS(1)PEKESKDYEMNANHK 134.67 3.405300000000001e-23 619941000.0 18822.2 22338.3 22800.800000000003 21344.100000000002 29748.100000000002 21667.6 21340.4 21401.899999999998 32751.4 35030.2 34112.0 True False 21998.927201391638 23475.2240554063 26034.296293060106 26573.40545817305 25372.19389706977 23960.451050211166 25217.674445388104 24435.68486556989 25333.260193238726 27116.8534904695 25641.048956694478 0.8579573807041174 0.9155329056566262 1.01533663217249 1.0363618704934123 0.9895146622090703 0.9344567412463626 0.9834884090732241 0.9529908431920884 0.9879962491403694 1.057556324480622 1.0 14.646167662319922 -5.562488666980909 3.7945683597547664 0.9901773998349582 0.8665958686931858 0.626927535696783 0.03327401122180393 0.08495541934144912 2.501853727566456 0.00379825062150178 0.019404569271254977 2.7384910949165653e-06 5.562488666980909 -0.1235815311417724 DGQDAIAQS(ph)PEKESKDYEMNANHK ddPTM_A549_PD325901_60min_R1 10 DGQDAIAQSPEKESKDYEMNANHK 24 2 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(0.963)PEKES(0.037)KDYEMNANHK;DGQDAIAQS(0.99)PEKES(0.008)KDY(0.002)EMNANHK;DGQDAIAQS(0.999)PEKES(0.001)KDYEMNANHK;DGQDAIAQS(0.999)PEKES(0.001)KDYEMNANHK;DGQDAIAQS(0.998)PEKES(0.002)KDYEMNANHK;DGQDAIAQS(1)PEKESKDYEMNANHK;DGQDAIAQS(1)PEKESKDYEMNANHK;DGQDAIAQS(1)PEKESKDYEMNANHK;DGQDAIAQS(1)PEKESKDYEMNANHK;DGQDAIAQS(1)PEKESKDYEMNANHK 251.13 2.9525999999999994e-111 1414395000.0 72571.9 70595.5 79769.5 78676.7 88847.1 86259.3 86282.3 90461.09999999999 89259.79999999999 88544.5 98319.59999999999 True False 79939.345863391 76544.83053992882 85183.13796297103 83536.38107124994 82606.78620185544 85556.8328599798 89565.82014198606 88656.78239513969 85508.52101531581 82953.78515890113 86226.91249929565 0.9270811576843134 0.8877139204138161 0.9878950259719302 0.968797080284329 0.9580162829386965 0.9922288805212488 1.0387223379094976 1.028179947830834 0.9916685932134506 0.9620405364691533 1.0 16.395850602338513 -5.950874442074879 0.8242694600861358 1.000783683472687 0.8928729330434716 0.5589518688567578 0.027336127560946524 0.5466100372464713 0.4687241133134027 0.0039870994892903565 0.043102534325042026 1.1197615684860465e-06 5.950874442074879 -0.1079107504292155 DGQDAIAQS(ph)PEKESKDYEMNANHKDGK ddPTM_A549_MK2206_60min_R1 2 DGQDAIAQSPEKESKDYEMNANHKDGK 27 3 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(0.47)PEKES(0.47)KDY(0.059)EMNANHKDGK;DGQDAIAQS(0.787)PEKES(0.213)KDYEMNANHKDGK 115.84 5.964299999999999e-18 33833000.0 2889.4 3194.7 3048.7 3198.6 4402.0 2991.0299999999997 3018.59 2551.29 5475.1 5637.799999999999 5913.6 True False 3377.0600809523326 3357.2965843330276 3481.051502958332 3982.257143590611 3754.471631294141 3307.538809314973 3567.028729738154 2912.9431704979374 4234.9985919381 4364.217064377848 4445.0899129429035 0.7597281825771947 0.7552820415527445 0.7831228549106394 0.8958777486132175 0.844633450577036 0.7440881678645715 0.8024649218797415 0.6553170413980226 0.9527363168980959 0.9818062513584763 1.0 12.11799688608944 -8.897606245311769 7.709069795499117 0.979260439611977 0.7850780996879857 0.7011811189331585 0.05774561411789257 0.09460971241615174 6.376717854556479 0.010362198647741674 0.011001282232865207 1.265883545306002e-09 8.897606245311769 -0.19418233992399125 DGQDAIAQS(ph)PEKESKDYEMNANHKDGK ddPTM_A549_PD325901_60min_R1 2 DGQDAIAQSPEKESKDYEMNANHKDGK 27 3 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(0.944)PEKES(0.041)KDY(0.015)EMNANHKDGK;DGQDAIAQS(0.764)PEKES(0.164)KDY(0.071)EMNANHKDGK 70.666 2.3562e-05 16975700.0 2315.3 2243.17 2862.7 2490.6 2889.8999999999996 2691.7 2662.5 3381.3 3734.0 2796.8999999999996 3662.6 True False 2550.347551566226 2432.209808305801 3056.98003681354 2644.4387054370004 2686.92339361377 2669.779687630292 2763.8228944759035 3313.857318921466 3577.07296533478 2620.303256678059 3212.1234191343374 0.7939755790123223 0.7571968728901699 0.9517006783124765 0.823268087921003 0.8364944440204267 0.8311572562021273 0.8604348382170041 1.0316718527006492 1.1136162900922393 0.8157542269606275 1.0 11.649311611126373 -8.25452423521804 3.774247471243242 1.0545965746842507 0.8349817960637052 0.34520258537003035 0.087950703914143 0.08227448102289553 2.6397108595829724 0.009637991997590429 0.012201742275924583 5.565135779018216e-09 8.25452423521804 -0.21961477862054557 DGQDAIAQSPEKES(ph)K ddPTM_A549_PD325901_60min_R1 1 DGQDAIAQSPEKESK 15 1 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(0.349)PEKES(0.651)K 244.97 4.7992999999999995e-65 28885000.0 14721.0 14442.0 15354.0 13223.0 17700.0 15674.0 15131.0 15206.0 16724.0 16721.0 16296.0 True False 16215.465082972572 15659.078024203402 16396.01477110249 14039.754678388128 16456.81306168509 15546.35614069814 15706.818485000898 14902.704401123767 16021.148439276601 15665.233206376279 14291.695308855236 1.134607527836488 1.0956767329416073 1.1472407168478749 0.9823715364047116 1.1514948161180243 1.087789503255468 1.0990171666526394 1.0427527371011012 1.1210110552349786 1.096107415379195 1.0 13.802889441442163 -10.893025600758298 0.91764076449733 0.9943020559348027 1.096078073955794 0.0 0.05418973230975969 0.5450596690113813 0.7356811807337618 0.03994771282823044 0.007621529666435463 1.2793058895078852e-11 10.893025600758298 0.10177601802099134 DGQDAIAQSPEKESKDY(ph)EMNANHK ddPTM_A549_PD325901_60min_R1 1 DGQDAIAQSPEKESKDYEMNANHK 24 2 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(0.258)PEKES(0.258)KDY(0.485)EMNANHK 58.903999999999996 0.00025973 8100600.0 2134.1 2038.2 2266.7 2864.6 3266.9 2609.2 2641.7 2663.0 2942.8 3329.1 2980.3 True False 2350.752260958616 2209.9662670635216 2420.5318927743915 3041.5398360213712 3037.4442141931668 2587.9515402775023 2742.2313390937084 2609.8843759169135 2819.124349862663 3118.900057852241 2613.741993678278 0.8993819078716484 0.8455181392840809 0.9260791228165619 1.1636725596396988 1.162105602442657 0.9901327470488083 1.049159154088736 0.9985241015483951 1.0785778996860182 1.193270057027726 1.0 11.351901022271457 -6.047904162668982 7.9116109698159685 1.0483051878738885 0.8754853841666997 0.5549835372843455 0.07252874651195218 0.1466316374894178 22.37206518512799 0.008636774940905118 0.023238265844716163 8.95562370726776e-07 6.047904162668982 -0.17281980370718875 DGQS(ph)SPQPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 2 DGQS(0.559)S(0.441)PQPS(1)PR 81.494 0.00089896 3698100.0 495.8 237.98 352.46 396.54 434.59 536.41 410.01 449.91 581.73 855.27 857.28 True False 546.1332510113308 258.03540979088285 376.38005511415787 421.0333751923185 404.0658976541086 532.0416548061685 425.6131549160807 440.9361921024331 557.2819111205682 801.2681062387084 751.839994745668 0.7263955826080739 0.34320521865582704 0.5006119091090379 0.5600039611283852 0.5374360242577887 0.7076527699037176 0.5660953898309931 0.5864761055330565 0.7412240836018377 1.0657428599681782 1.0 9.554281852543928 -9.603413200620027 0.36872433368069407 1.0524966963287095 0.5043095755643827 0.7641140733215415 0.09910346541898402 0.45519078155517867 0.13978270333784018 0.09712568377816279 0.041714824688367375 2.4922224244278046e-10 9.603413200620027 -0.5481871207643267 DGQS(ph)SPQPSPR ddPTM_A549_MK2206_60min_R1 2 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 DGQS(0.499)S(0.499)PQPS(0.003)PR;DGQS(0.5)S(0.5)PQPSPR 151.7 6.1218e-12 107115880.0 1394.7 1323.36 1138.06 1137.09 2258.57 1595.48 985.73 1615.52 2103.8 2202.92 2418.0 True False 1630.0912628588014 1390.7133714724255 1299.4540208799674 1415.6771010459095 1926.3373449095882 1764.3126346060913 1164.8243815042094 1844.5249073225036 1627.2926590782572 1705.2788420056138 1817.5438665949584 0.8968648805779107 0.7651608288705735 0.7149505686013531 0.7788956993363146 1.0598574154462894 0.9707125462184347 0.6408782769498854 1.0148447810385408 0.8953251082334955 0.9382325639272381 1.0 10.827774468809869 -14.999949094861655 0.02799619179761162 1.9837287363125227 0.17945111587454282 0.15414069439195655 0.11923973523348212 1320.4191491553872 2.8618240548352123 138.2528692138841 60.92510557730124 1.0001172202824695e-15 14.999949094861655 -1.8042776204379798 DGQS(ph)SPQPSPR ddPTM_A549_PD325901_60min_R1 1 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 DGQS(0.5)S(0.5)PQPSPR 52.693000000000005 0.030361000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DGQSS(ph)PQPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 2 DGQS(0.147)S(0.853)PQPS(1)PR;DGQS(0.426)S(0.574)PQPS(1)PR 88.101 0.00035210000000000005 11769000.0 872.8900000000001 1026.5900000000001 718.1400000000001 647.46 1256.07 750.8299999999999 500.27000000000004 823.89 1075.49 955.14 874.1400000000001 True False 1020.2124918884487 1078.8390460795833 819.98305059025 806.0877290655842 1071.3037669058679 830.282332239383 591.1625834002323 940.6789305573046 831.8932322046181 739.3732106264605 657.0669129633243 1.5526767088109248 1.641901341849793 1.2479445158670153 1.226797017415147 1.63043328734111 1.2636191472415947 0.8996992113544902 1.4316333877091918 1.2660708000846363 1.1252631901550798 1.0 9.359896485870017 -2.0000000011113763 0.07395056904320832 0.6997827254695143 2.885572769854644 0.3948884125699269 0.18145683011818087 131.79023230882214 0.6959079935126 3.33486555214401 29.712573706957873 0.009999999974409614 2.0000000011113763 2.1857900443851297 DGQSS(ph)PQPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 2 DGQS(0.125)S(0.875)PQPS(1)PR 86.772 0.00035788 4755400.0 556.72 396.34 591.31 393.62 587.0 590.14 353.6 448.89 827.67 963.72 1006.7 True False 613.2378045643973 429.7409627553508 631.4398524358871 417.93301342411934 545.7711450400649 585.3340955002932 367.0564414973447 439.93653680260724 792.885908199956 902.870554730516 882.8822819970891 0.6945861493304032 0.48674774827655637 0.7152027686041716 0.47337342921725695 0.6181697788809679 0.6629809063290536 0.4157478850601228 0.4982958042916731 0.8980652623432873 1.0226397937086393 1.0 9.78607728053563 -8.839008266891938 5.047207296507685 0.9553956284038371 0.5691127042029457 0.778880936115029 0.09572054245840214 0.0656542549452109 2.9626830885608064 0.016280872711513957 0.017302884122062677 1.4487442761131699e-09 8.839008266891938 -0.3862829242008914 DGQSS(ph)PQPSPR ddPTM_A549_MK2206_60min_R1 1 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 DGQS(0.001)S(0.999)PQPSPR 171.32 4.1878e-15 86151000.0 1566.7 1687.0 1066.1 1257.8 1730.3 1301.7 1151.7 1195.6 2272.4 2100.1 2045.7 True False 1831.1206578625397 1772.8610942404057 1217.2890108255572 1565.9610564647878 1475.7751621145503 1439.4450300014719 1360.948982153732 1365.0799613714375 1757.7050282771336 1625.6859514172043 1537.6962315522353 1.190820800811943 1.152933237308374 0.7916316537998916 1.0183812799515157 0.9597312732078569 0.9361049344241527 0.8850571096086483 0.8877435824847217 1.1430768913979905 1.0572217828589898 1.0 10.586554814933542 -8.765322552895954 24.994551861102046 1.0675640814378853 0.9737017060112384 0.10790627172415646 0.11347400629884284 166.3660624973662 1070833.9881887508 0.020846478427373166 0.022600114262809553 1.7166329608589413e-09 8.765322552895954 -0.09386237542664688 DGQSS(ph)PQPSPR ddPTM_A549_PD325901_60min_R1 4 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 DGQS(0.141)S(0.859)PQPSPR;DGQS(0.075)S(0.924)PQPSPR;DGQS(0.401)S(0.596)PQPS(0.002)PR;DGQS(0.317)S(0.683)PQPSPR 142.83 2.8108e-11 220018400.0 2937.33 3541.6499999999996 3347.0800000000004 3153.2999999999997 4352.5599999999995 3396.57 3670.38 3689.9700000000003 3503.1499999999996 3670.14 4213.83 True False 3235.52557925194 3840.1172749217544 3574.2329764271008 3348.0721793361013 4046.8512011168373 3368.9094600491953 3810.0583194090013 3616.370653624535 3355.92478803228 3438.406734049987 3695.555623669208 0.8755180299625641 1.039117704067735 0.9671706613032522 0.9059726115045994 1.0950589338170584 0.9116110818281513 1.0309838918419816 0.9785729189035848 0.9080974905473839 0.9304167178617905 1.0 11.85157557332297 -5.224696438624541 22.922297876642087 0.9690716893978102 0.8755173964883641 0.18610432801444876 0.058897503516341605 8904.626684095458 5554893.114839283 0.007798940873217252 2.2125570580094513 5.960786425550861e-06 5.224696438624541 -0.09355429290944606 DGQVINETS(ph)QHHDDLE ddPTM_A549_MK2206_60min_R1 4 DGQVINETSQHHDDLE 16 0 P08670 P08670 VIM Vimentin 1 DGQVINET(0.049)S(0.951)QHHDDLE;DGQVINET(0.149)S(0.851)QHHDDLE;DGQVINET(0.121)S(0.879)QHHDDLE;DGQVINET(0.02)S(0.98)QHHDDLE 185.02 4.3087999999999995e-34 625521400.0 3610.71 4123.45 3703.64 3539.25 5570.85 4297.51 4575.299999999999 3813.55 5770.32 5424.58 6186.52 True False 4220.109574615976 4333.315992321041 4228.871843217301 4406.366408882971 4751.385344660371 4752.269655743739 5406.572786357528 4354.132391007066 4463.351733307562 4199.16361046557 4650.236344734098 0.907504320591104 0.9318485494243889 0.9093885836589902 0.9475575179899655 1.0217513675494825 1.0219415323105423 1.1626447314833581 0.9363249667810243 0.9598118036219466 0.9030000411098846 1.0 12.183088326627018 -6.569715060394743 4.7098097883254155 0.996551876177955 0.9190013825654967 0.26509131043516787 0.06255003273172861 0.21139840880974392 10.325135283544958 0.008461940490665584 0.018321014662976788 2.6933012931188826e-07 6.569715060394743 -0.07755049361245836 DGQVINETS(ph)QHHDDLE ddPTM_A549_PD325901_60min_R1 5 DGQVINETSQHHDDLE 16 0 P08670 P08670 VIM Vimentin 1 DGQVINET(0.013)S(0.987)QHHDDLE;DGQVINET(0.172)S(0.828)QHHDDLE;DGQVINET(0.029)S(0.971)QHHDDLE;DGQVINET(0.03)S(0.97)QHHDDLE;DGQVINET(0.191)S(0.809)QHHDDLE 194.99 3.894699999999999e-39 1768067000.0 8993.48 7535.8099999999995 8352.75 8630.060000000001 8970.0 8224.9 8736.74 9386.269999999999 8866.29 8764.92 9363.34 True False 9906.491468949947 8170.879155627499 8919.617844166105 9163.119205911682 8339.978144820077 8157.919141356907 9069.22142162757 9199.053481463632 8493.67066465402 8211.501455369396 8211.708539102632 1.2063861523795045 0.9950279063996595 1.0862073101709029 1.1158602576161354 1.0156203310318004 0.9934496703713253 1.1044256354742281 1.1202362380081377 1.0343365968493325 0.9999747818943829 1.0 13.003466706963273 -2.000748332262612 0.01143001033521155 0.07435061773471742 2.2038144075179726 0.2337667081771999 0.058605852639245774 7862.37503001188 6.755775849370604 528.4244687054597 748.2697361099754 0.009982783849697906 2.000748332262612 2.129463789783255 DGRHPQGEQMYR ddPTM_A549_MK2206_60min_R1 2 DGRHPQGEQMYR 12 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 73.273 0.0051979999999999995 12991600.0 807.05 937.47 689.6099999999999 700.3 863.1099999999999 618.76 753.07 693.49 1131.69 1118.98 1313.76 False True 943.2603095219015 985.1832187418806 787.4070675878547 871.8735314376613 736.1476623549036 684.2367725003539 889.8930711040291 791.7943312240536 875.364021937577 866.2016408346385 987.5171340685658 0.9551837400893224 0.9976365824488842 0.7973604106935759 0.8828945861886431 0.7454530528720841 0.6928859752349833 0.9011419046854143 0.8018031322270478 0.8864291987837026 0.8771509991587608 1.0 9.947661969872133 -9.91665858172546 0.8258396472951708 0.9888576289053949 0.845758938233116 0.08005427453210245 0.09081688923248413 0.52570550653759 0.7348685409006608 0.03668575577933626 0.018264536571122626 1.2115502129585938e-10 9.91665858172546 -0.14309869067227887 DGRRDS(ph)SDTTPLLNGSSQDR ddPTM_A549_MK2206_60min_R1 2 DGRRDSSDTTPLLNGSSQDR 20 2 B4DQA8;E9PCW1 B4DQA8 GOSR1 Golgi SNAP receptor complex member 1 1 DGRRDS(0.979)S(0.019)DT(0.001)TPLLNGSSQDR;DGRRDS(0.823)S(0.17)DT(0.006)T(0.001)PLLNGSSQDR 96.679 4.631100000000001e-07 34463000.0 4876.700000000001 4244.700000000001 4155.1 4324.5 5901.4 3971.1000000000004 3269.8 3765.1 6104.0 6206.7 6395.0 True False 5699.767736132157 4460.737099420417 4744.355659770446 5384.002694134179 5033.3118775373105 4391.3191661971605 3863.880335023244 4298.814455135159 4721.453746085031 4804.602159259636 4806.945006978807 1.1857359981978437 0.9279775601643538 0.9869793918762348 1.1200466588067035 1.0470916289306118 0.9135363853386644 0.8038120530635559 0.894292414182826 0.9822150532677909 0.9995126119155161 1.0 12.230904583329744 -7.235915769499366 22.60832913221849 0.9627687111161531 1.0465832269420494 0.30585444586068034 0.08414005644898771 327.73949549806935 290304.2322174625 0.013131826300296275 0.022735990071234304 5.808770664813212e-08 7.235915769499366 0.08381451582589627 DGRRDS(ph)SDTTPLLNGSSQDR ddPTM_A549_PD325901_60min_R1 1 DGRRDSSDTTPLLNGSSQDR 20 2 B4DQA8;E9PCW1 B4DQA8 GOSR1 Golgi SNAP receptor complex member 1 1 DGRRDS(0.967)S(0.033)DTTPLLNGSSQDR 134.76 1.7254e-17 18963000.0 3034.9 3268.5 2595.2 3399.8 3618.3 3670.1 3173.5 3813.3 4163.8 3799.3 3999.4 True False 3343.0008138247044 3543.9479658017485 2771.3258782053667 3609.7979244939834 3364.163090457354 3640.211922417779 3294.2692791058344 3737.2407400240213 3988.8099660045414 3559.411549607404 3507.4991542854436 0.9531009607629538 1.0103916807711193 0.7901144822285633 1.0291657291160146 0.9591343981785534 1.0378368639006477 0.939207433615747 1.0655001115133216 1.1372233578819355 1.0148004013795795 1.0 11.776227040650285 -7.6336633268604555 0.9988265041609827 1.0640905344135603 0.9414030399530489 0.2566262132172511 0.07212680005797421 0.4656516111694543 0.935202232532103 0.013943850574515882 0.025587468269089874 2.3245381231345725e-08 7.6336633268604555 -0.12268749446051141 DGRRDSSDTT(ph)PLLNGSSQDR ddPTM_A549_PD325901_60min_R1 1 DGRRDSSDTTPLLNGSSQDR 20 2 B4DQA8;E9PCW1 B4DQA8 GOSR1 Golgi SNAP receptor complex member 1 1 DGRRDS(0.305)S(0.185)DT(0.185)T(0.324)PLLNGSSQDR 71.678 0.0012862 20224000.0 2587.0 2994.5 2777.4 3101.1 2592.1 2945.6 2688.8 3159.9 3110.0 3555.2 3363.7 True False 2849.630335551256 3246.857024198663 2965.8910658629698 3292.6479038909006 2410.0398382595445 2921.6120102105674 2791.123755367818 3096.873315606406 2979.297515316327 3330.724065265774 2949.986224251126 0.9659808958174556 1.100634639411884 1.0053914969097462 1.1161570439966246 0.8169664720625431 0.9903815774435485 0.9461480641579483 1.0497924668758642 1.0099360772685106 1.129064277617534 1.0 11.526492502102332 DGS(ph)FGEGLTMK ddPTM_A549_MK2206_60min_R1 3 DGSFGEGLTMK 11 0 Q9ULT0;Q9ULT0-4;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 DGS(1)FGEGLTMK;DGS(1)FGEGLTMK;DGS(0.998)FGEGLT(0.002)MK 142.91 2.7911e-11 18688900.0 9572.4 11105.4 9879.7 9550.400000000001 12449.9 11010.5 9952.900000000001 10524.5 15948.4 14261.099999999999 14530.8 True False 11187.98709728945 11670.617425001412 11280.790019935519 11890.248428733752 10618.536202282801 12175.623801821617 11761.213097575654 12016.380104929489 12336.112864361477 11039.507605235896 10922.40133032176 1.024315693860323 1.0685028934619463 1.032812261587462 1.088611200883559 0.9721796408272056 1.1147387313100074 1.0767973765004644 1.1001591812572138 1.1294323007629379 1.0107216601343 1.0 13.41500245251872 -7.3080883470788836 24.999564166494633 1.0704546519495084 1.0416214372983934 0.1211604609248339 0.04575014677722222 1016.6953529951093 544853.3765884448 0.008232456292407195 0.013160545442096489 4.919394518989507e-08 7.3080883470788836 -0.02883321465111499 DGS(ph)FGEGLTMK ddPTM_A549_PD325901_60min_R1 4 DGSFGEGLTMK 11 0 Q9ULT0;Q9ULT0-4;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 DGS(1)FGEGLTMK;DGS(1)FGEGLTMK;DGS(1)FGEGLTMK;DGS(1)FGEGLTMK 121.04 1.0982000000000001e-05 28791400.0 14566.5 15817.6 16075.2 17552.8 20001.8 16512.1 16051.8 16333.0 18468.8 17849.1 20010.8 True False 16045.280356709472 17150.60466387204 17166.15974003039 18636.99659069886 18596.942570463998 16377.630932169295 16662.660032882002 16007.225502009363 17692.62056298204 16722.104779853544 17549.59845891263 0.9142819076046048 0.9772647906460811 0.9781511400514403 1.0619614251763114 1.0596790926016584 0.9332196956251072 0.9494610416239926 0.9121134902023945 1.008149594100643 0.9528482841931439 1.0 14.09915040107856 -7.623341304282582 0.0037034934895138327 1.9714182358248935 3.118770175904314e-09 0.0 0.051439824653784334 40440.06565198638 64.1102842063774 16918.039317331233 17207.063372287517 2.380447982484772e-08 7.623341304282582 -1.9714182327061234 DGS(ph)GDS(ph)HPDFPEDADIDLKDVDK ddPTM_A549_PD325901_60min_R1 1 DGSGDSHPDFPEDADIDLKDVDK 23 1 Q08752 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 2 DGS(1)GDS(1)HPDFPEDADIDLKDVDK 61.101000000000006 0.00026918 2871000.0 1410.2 1101.5 1253.4 1544.3 1440.4 1079.9 1459.0 1472.6 1337.1 1192.2 1604.4 True False 1553.3624658656295 1194.327270714586 1338.4632613064907 1639.687903640231 1339.2312731102375 1071.1056524397038 1514.5230433954346 1443.2278377676475 1280.906336890502 1116.9242885378753 1407.0689711295606 1.1039703793756663 0.8488050658638354 0.9512421130515053 1.165321627641273 0.9517879369020094 0.761231804848803 1.076367309968901 1.0256980058405094 0.9103365671280645 0.7937949819483516 1.0 10.45847733240342 DGS(ph)GDSHPDFPEDADIDLKDVDK ddPTM_A549_MK2206_60min_R1 2 DGSGDSHPDFPEDADIDLKDVDK 23 1 Q08752 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 1 DGS(0.841)GDS(0.159)HPDFPEDADIDLKDVDK;DGS(0.817)GDS(0.183)HPDFPEDADIDLKDVDK 138.78 4.1228000000000003e-23 25065700.0 5543.4 6646.5 6249.2 5272.2 7401.900000000001 5871.200000000001 5832.9 6080.4 7972.099999999999 8466.5 8850.9 True False 6478.99039688211 6984.778460503171 7135.430528516149 6563.889236678052 6313.090315237642 6492.486487012862 6892.662427719463 6942.315320444036 6166.432078827732 6553.911769760374 6652.977257586982 0.9738482706360586 1.0498725893791094 1.0725168976609656 0.9866093002486466 0.948912054078986 0.9758768496628937 1.0360267532643594 1.043490012313975 0.9268680532156638 0.9851096007109247 1.0 12.699784386708822 -6.436834308601012 7.656218023601606 0.9757008232803698 1.033584252065278 0.15527901815544243 0.03973521244489808 0.3202648196027174 25.40787453743545 0.006349687277563136 0.014790912561444212 3.6573429941692297e-07 6.436834308601012 0.057883428784908264 DGS(ph)GDSHPDFPEDADIDLKDVDK ddPTM_A549_PD325901_60min_R1 1 DGSGDSHPDFPEDADIDLKDVDK 23 1 Q08752 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 1 DGS(0.994)GDS(0.006)HPDFPEDADIDLKDVDK 162.47 1.5118e-33 26555000.0 3458.5 3972.5 3788.6 3433.9 4071.2 3592.6 4008.4 4101.0 4019.0 4640.8 5194.3 True False 3809.604373986865 4307.276516489962 4045.7171787025463 3646.0042040472636 3785.252956877534 3563.343056722734 4160.941855480644 4019.2023378277395 3850.095406448977 4347.779095996119 4555.434029380631 0.8362769276026217 0.9455249464068282 0.8881079503312691 0.800363737139441 0.8309313519774947 0.7822181231778733 0.9134018468151052 0.8822874641374625 0.845165440135338 0.9544159937241491 1.0 12.153372801302828 -10.777967585134398 0.6982198946921455 1.0158945727982418 0.8570500084696488 0.4773319943668115 0.04718341466838525 0.5633034853518157 0.40684575658629996 0.053932920353848286 0.009303105005268434 1.667371657169806e-11 10.777967585134398 -0.15884456432859295 DGS(ph)NKSGAEEQGPIDGPSK ddPTM_A549_MK2206_60min_R1 1 DGSNKSGAEEQGPIDGPSK 19 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DGS(0.595)NKS(0.405)GAEEQGPIDGPSK 98.565 2.4505e-07 9060100.0 2533.3 2672.4 2608.0 2430.0 3968.2 2825.8 2935.0 3110.6 4043.9 3840.0 4403.0 True False 2960.859106761457 2808.413745256703 2977.8536162020937 3025.3501090868467 3384.483036642752 3124.824280385772 3468.2515087446386 3551.537075812976 3127.9631067813334 2972.541333004174 3309.613583381971 0.8946238079358695 0.8485624301755764 0.8997587002767665 0.9141097692726273 1.0226218110889775 0.9441658978183883 1.0479324614085497 1.0730972019349136 0.9451142944563892 0.898153593497959 1.0 11.69244706849764 -6.572873425568038 3.7509998918645033 0.9872809609144229 0.8803682439228288 0.5056250473613395 0.04848212125704107 0.13232864143756198 3.86757070497485 0.006378615699369817 0.014227005696341695 2.673785565641325e-07 6.572873425568038 -0.1069127169915941 DGSGDS(ph)HPDFPEDADIDLK ddPTM_A549_MK2206_60min_R1 1 DGSGDSHPDFPEDADIDLK 19 0 Q08752 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 1 DGS(0.474)GDS(0.526)HPDFPEDADIDLK 54.223 0.0033016999999999994 1344300.0 1050.2 895.66 945.17 662.25 1320.6 1275.9 674.02 1100.4 1336.0 1220.8 1109.1 True False 1227.4480850751518 941.2452683268289 1079.2093184147748 824.5012797295319 1126.3414893882414 1410.9148911261248 796.4807093438034 1256.3850698336648 1033.398133153604 945.0204321175779 833.6798603972157 1.4723254613471422 1.1290248367980995 1.294512881600107 0.9889902813973332 1.351047977639263 1.6923941169142303 0.955379573358425 1.5070354095336387 1.2395623095191843 1.1335531503271685 1.0 9.703349673581782 -10.196802613737008 0.7963881161199907 1.0099924697639264 1.2877656861652564 0.1345942562462783 0.2115988178224584 0.6994009681467539 0.861487402191174 0.10370793566882383 0.0395664874056131 6.356197545429934e-11 10.196802613737008 0.27777321640133 DGSGDS(ph)HPDFPEDADIDLK ddPTM_A549_PD325901_60min_R1 1 DGSGDSHPDFPEDADIDLK 19 0 Q08752 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 1 DGS(0.44)GDS(0.56)HPDFPEDADIDLK 60.99100000000001 0.00086192 2774600.0 1539.9 1254.0 1373.7 1350.7 1589.5 1395.8 1348.6 1574.0 1394.2 1916.3 1817.5 True False 1696.229514385536 1359.6789809133832 1466.9275427291575 1434.1296713377315 1477.8590034773142 1384.4330675760152 1399.921710982236 1542.6053352208878 1335.6066224611004 1795.3044909621956 1593.9590220817604 1.0641613058347053 0.8530200350681536 0.9203044259025581 0.899728067955419 0.9271624822244076 0.8685499742445714 0.8782670643275976 0.9677823042189609 0.8379177908330142 1.1263178451209315 1.0 10.63839882528323 -11.096650605328003 1.4396574748929403 0.9998475567207137 0.9012792373138718 0.3159646415839472 0.07209238731509167 0.43828780141278134 1.6275761941392106 0.04110106789299507 0.009034403367264085 8.00477989344959e-12 11.096650605328003 -0.09856831940684185 DGSGGASGTLQPSS(ph)GGGSSNSRER ddPTM_A549_MK2206_60min_R1 1 DGSGGASGTLQPSSGGGSSNSRER 24 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 DGSGGASGTLQPS(0.054)S(0.272)GGGS(0.225)S(0.225)NS(0.225)RER 64.733 8.7654e-05 4169100.0 577.46 403.38 317.58 321.79 596.56 325.7 395.03 488.77 697.18 666.89 776.75 True False 674.9211304584811 423.910319024715 362.6176194146707 400.6285644457019 508.8068142582536 360.16535781783756 466.80183764885686 558.0546442953473 539.2698431676869 516.2390858247797 583.8615377905846 1.1559609372668715 0.7260459742370634 0.6210678319158811 0.6861705019339646 0.8714511597795107 0.6168677580317324 0.7995077727080664 0.9557996342884748 0.9236262508545449 0.8841806702635391 1.0 9.189482465682586 -8.228624427061199 4.328622951613914 0.9628299494595818 0.7657107217003243 0.21396685864494258 0.14265312585860265 0.19767337331947712 8.733066493548883 0.02210761350684092 0.028273468789842764 5.9071170012466915e-09 8.228624427061199 -0.1971192277592575 DGSGGASGTLQPSS(ph)GGGSSNSRER ddPTM_A549_PD325901_60min_R1 2 DGSGGASGTLQPSSGGGSSNSRER 24 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 DGSGGASGTLQPS(0.092)S(0.397)GGGS(0.189)S(0.189)NS(0.132)RER;DGSGGASGTLQPS(0.061)S(0.291)GGGS(0.216)S(0.216)NS(0.216)RER 115.55 2.7812e-16 13897600.0 1721.8600000000001 1569.85 1630.85 1625.0900000000001 1858.95 1738.3600000000001 1650.1399999999999 1840.54 1727.95 2036.03 1567.9099999999999 True False 1896.6619596336634 1702.1467688890546 1741.5292880977254 1725.4681184528283 1728.38376502935 1724.2033725114204 1712.936980691255 1803.8289858243033 1655.3302706079894 1907.4747183289471 1375.0670098003927 1.3793232956035986 1.2378645962396708 1.2665050326169407 1.2548247511976165 1.2569451181002773 1.2539049807919609 1.2457116405839073 1.3118116956977612 1.2038178930991008 1.3871867368891642 1.0 10.425286210463822 -10.192012946830893 0.48830554723841696 0.9716666367011128 1.280725590834796 0.0 0.12146581476608223 0.2937005023735624 0.12253320374737205 0.041028316122574626 0.010754057004683225 6.426685583234911e-11 10.192012946830893 0.30905895413368334 DGSGGASGTLQPSSGGGSSNS(ph)RER ddPTM_A549_MK2206_60min_R1 1 DGSGGASGTLQPSSGGGSSNSRER 24 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 DGSGGASGTLQPS(0.148)S(0.119)GGGS(0.096)S(0.096)NS(0.54)RER 80.359 4.9843e-06 5864200.0 549.46 427.41 480.52 446.0 579.0 485.87 391.52 354.32 809.28 840.47 699.26 True False 642.195414992756 449.16334338428663 548.6649615250884 555.2700200217008 493.8298669966618 537.2844409055966 462.654116083033 404.5459450594911 625.9793721546023 650.6072432682345 525.6144434057861 1.2217994064842825 0.8545490882515998 1.0438544229681808 1.0564207795047593 0.9395287233676988 1.0222025814667368 0.8802157586941607 0.769662915726181 1.1909478135693699 1.237803206191484 1.0 9.037861109924316 DGSGT(ph)PSR ddPTM_A549_MK2206_60min_R1 1 DGSGTPSR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGS(0.17)GT(0.829)PS(0.001)R 47.603 0.039434 24269000.0 480.35 485.05 324.19 203.1 198.5 144.81 75.916 152.7 168.82 615.14 757.97 True False 561.4213365700335 509.73697318394096 370.1650168084958 252.85950911750552 169.30091295136 160.13369808290162 89.70895452737926 174.3456926241372 130.58253955014334 476.17944676671584 569.7451300922171 0.9853903208951759 0.8946754368948034 0.6497028184314311 0.44381161990200513 0.29715201413649206 0.28106198653594966 0.15745453500034176 0.3060064639708604 0.22919465679155113 0.8357762473364941 1.0 9.154172877853565 -5.818418000505179 2.615934409365071 0.5115507123283787 0.9689113934509143 0.34659574032410445 0.25169151791070155 0.35695390559888235 4.789966339566524 0.04819049787496243 0.21588564881640046 1.519084734582083e-06 5.818418000505179 0.4573606811225356 DGSGT(ph)PSR ddPTM_A549_PD325901_60min_R1 1 DGSGTPSR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGS(0.158)GT(0.835)PS(0.007)R 49.418 0.035421 48754000.0 506.46 352.15 254.87 477.36 319.54 332.34 280.64 246.35 311.49 324.94 431.39 True False 557.8754463638534 381.8269163705322 272.16701085781494 506.8454430367806 297.0966127531556 329.6335332269756 291.3199087721006 241.43635599216364 298.3991585356534 304.4232329453928 378.33176480652065 1.4745667645674732 1.0092383243733156 0.7193871521652471 1.3396851393009044 0.7852806462208934 0.8712816736272478 0.770011761822542 0.6381604148825158 0.7887235127831655 0.8046462424350628 1.0 8.563508100195769 -6.792279366308314 24.999837684590787 0.8590515303959778 1.0969473311397102 0.3602761498682817 0.20041956140244818 221.45817796080632 179520.19611705694 0.02952004201065377 0.05579173503062995 1.6133204308892462e-07 6.792279366308314 0.2378958007437324 DGSGTPS(ph)R ddPTM_A549_MK2206_60min_R1 1 DGSGTPSR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGS(0.006)GT(0.357)PS(0.637)R 49.715 0.032805 24609000.0 620.72 584.52 720.77 360.45 89.421 106.5 0.0 132.88 0.0 826.32 819.17 True False 725.4823608530261 614.2695713132196 822.9860241372636 448.7602661812151 76.26728935528241 117.76975931102152 0.0 151.71614692793293 0.0 639.653738095836 615.7474810581436 1.1782140945283386 0.9975998119515092 1.33656417517614 0.7288056873737169 0.12386130954887441 0.19126307932049955 0.0 0.246393451203752 0.0 1.0388247743971444 1.0 9.266195010635611 -6.49101731381797 4.88679090896782 0.4059549297077104 1.1441297405199977 0.5083928994447287 0.34333497804950586 0.16090542529815433 9.639161336424747 0.05960483252172381 0.13726424648465518 3.228365415390857e-07 6.49101731381797 0.7381748108122873 DGSIS(ph)PVSSECSVVER ddPTM_A549_MK2206_60min_R1 2 DGSISPVSSECSVVER 16 0 H0YCZ0;H7BY22;H0YEM9;Q8NCP5-3;Q8NCP5-4;Q8NCP5-2;Q8NCP5 H0YCZ0 ZBTB44 Zinc finger and BTB domain-containing protein 44 1 DGS(0.013)IS(0.971)PVS(0.016)SECSVVER;DGS(0.085)IS(0.893)PVS(0.01)S(0.012)ECS(0.001)VVER 138.39 9.8656e-11 10386200.0 1000.53 1327.03 1270.01 1106.8200000000002 1183.47 1036.51 1007.1500000000001 1086.33 1472.99 1448.52 1763.18 True False 1169.3950033900599 1394.5701587965884 1450.1165149972483 1377.9909496870384 1009.3831307332288 1146.1928002203463 1190.1361182392382 1240.3206042460972 1139.3601168816824 1121.298325959169 1325.333744707568 0.8823400204361991 1.052240738882188 1.0941519604310785 1.0397312791511915 0.7616067535924296 0.8648333333376728 0.8979897501227806 0.9358552962218367 0.8596778897628383 0.8460497821298446 1.0 10.372139988643552 DGSIS(ph)PVSSECSVVER ddPTM_A549_PD325901_60min_R1 1 DGSISPVSSECSVVER 16 0 H0YCZ0;H7BY22;H0YEM9;Q8NCP5-3;Q8NCP5-4;Q8NCP5-2;Q8NCP5 H0YCZ0 ZBTB44 Zinc finger and BTB domain-containing protein 44 1 DGS(0.014)IS(0.784)PVS(0.199)S(0.004)ECSVVER 128.9 5.3023e-10 6635000.0 1266.2 957.91 1100.4 984.53 1113.0 877.92 915.92 1248.3 1033.7 1294.7 1280.9 True False 1394.7436918728267 1038.6364374854375 1175.0797612427496 1045.3421820701394 1034.8267196415547 870.7705105934484 950.7758368106556 1223.4016772275947 990.2571837885806 1212.952421045116 1123.3574202941008 1.2415849725794978 0.9245823446054391 1.0460426396926346 0.9305517221726842 0.9211909771073855 0.7751500055658832 0.8463698370922209 1.0890582597543192 0.8815156831646033 1.0797564507363637 1.0 10.133601309858117 -2.8556097536129155 1.3135476599033002 0.9353304072771517 199.99999960445058 0.42286604882448586 0.09536833669403597 622.6175491585267 2.097684300088191 0.012644134425852728 372326.96597217926 0.0013944092221472326 2.8556097536129155 199.06466919717343 DGSNKS(ph)GAEEQGPIDGPSK ddPTM_A549_MK2206_60min_R1 1 DGSNKSGAEEQGPIDGPSK 19 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DGS(0.126)NKS(0.874)GAEEQGPIDGPSK 131.57 1.0643e-23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DGSNKS(ph)GAEEQGPIDGPSK ddPTM_A549_PD325901_60min_R1 1 DGSNKSGAEEQGPIDGPSK 19 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DGS(0.01)NKS(0.99)GAEEQGPIDGPSK 124.39 4.259e-15 14851000.0 5312.3 5581.4 5288.0 4994.7 6264.1 6246.3 5166.8 5709.7 5606.1 5458.5 7220.4 True False 5851.600785291433 6051.764165925 5646.875479327212 5303.211275213278 5824.1312259718425 6195.432203754166 5363.425401381444 5595.815554327002 5370.495112737896 5113.849378446565 6332.3365738867415 0.9240824010243289 0.9556921201695494 0.8917522644980321 0.8374809540419306 0.9197444194595351 0.9783801179019541 0.8469899442014993 0.8836889020402041 0.8481063901253635 0.8075770008080481 1.0 12.628522223739923 -10.966683368190706 1.2445319821506102 0.9997686798513464 0.8942521593265446 0.0 0.07079540332911184 0.35740538860236826 0.9879180352500194 0.03176369615850937 0.007420547370641704 1.0797336385579523e-11 10.966683368190706 -0.10551652052480187 DGSSQSDS(ph)GEEQSR ddPTM_A549_PD325901_60min_R1 1 DGSSQSDSGEEQSR 14 0 Q8WUQ7-2;Q8WUQ7 Q8WUQ7-2 CACTIN Cactin 1 DGS(0.003)S(0.003)QS(0.003)DS(0.991)GEEQSR 65.092 0.0048424 1311900.0 235.23 226.64 204.18 186.42 233.45 285.73 202.68 193.19 224.19 324.77 275.9 True False 259.11037643282646 245.73974819314913 218.03688263408273 197.9347400094618 217.05327735877881 283.40310961347956 210.39309831075164 189.3366738953769 214.7680739417258 304.26396677440505 241.9660490741996 1.070854268291869 1.015595986021131 0.9011052726955966 0.8180269123159692 0.897040217787822 1.1712515482970636 0.8695149551589941 0.7824927282972507 0.8875959034891979 1.2574655326173534 1.0 7.918660822942185 DGSTEDTASSLCGEEDT(ph)EDEELEAAASHLNKDLYR ddPTM_A549_PD325901_60min_R1 2 DGSTEDTASSLCGEEDTEDEELEAAASHLNKDLYR 35 1 F8VS45;Q92994-9;Q92994-3;Q92994-7;Q92994-8;Q92994-5;Q92994 F8VS45 BRF1 Transcription factor IIIB 90 kDa subunit 1 DGSTEDTASSLCGEEDT(1)EDEELEAAASHLNKDLYR;DGSTEDT(0.001)AS(0.025)S(0.024)LCGEEDT(0.95)EDEELEAAASHLNKDLYR 133.13 1.2744999999999998e-29 16282100.0 1003.21 759.8299999999999 1130.62 755.5799999999999 815.69 1020.9200000000001 1241.45 1124.8200000000002 881.6500000000001 1118.3600000000001 1215.19 True False 1105.055140675832 823.8635407236167 1207.350672170372 802.2504605533155 758.3987483777356 1012.605966004947 1288.6940590975062 1102.3845826957809 844.5973165204633 1047.7465587394881 1065.7293337240908 1.0369003702040562 0.7730513880524459 1.1328867790017554 0.7527713042765998 0.7116241660793765 0.9501530397652571 1.2092132761273315 1.0343945200828824 0.792506398945685 0.9831263207124424 1.0 10.05762536396314 DGT(ph)ISEDTIR ddPTM_A549_MK2206_60min_R1 3 DGTISEDTIR 10 0 F5H442;Q99816-2;Q99816 F5H442 TSG101 Tumor susceptibility gene 101 protein 1 DGT(0.999)IS(0.001)EDTIR;DGT(0.658)IS(0.34)EDT(0.002)IR;DGT(0.999)IS(0.001)EDTIR 141.08 5.5025000000000005e-08 27148900.0 1279.37 1364.74 1376.08 1281.3200000000002 1610.88 1261.15 1185.37 1246.23 1841.46 1452.11 1626.6399999999999 True False 1495.2963784065844 1434.1994367241562 1571.2288359598833 1595.243457520641 1373.9216859198325 1394.6040559163823 1400.7363853221923 1422.8869189193101 1424.3722502073626 1124.077342465805 1222.70039501986 1.2229458536997502 1.1729769962991308 1.2850481134704812 1.3046887561484184 1.1236781238608466 1.1405934451290745 1.1456088433662774 1.163724919624483 1.164939715411008 0.9193399683554915 1.0 10.255855220357601 -14.999999999787178 0.13590775129817892 0.30976419927673854 1.2712225668831816 0.7409049374986862 0.05424544301838969 28.663119450606285 0.2636551902733131 5.317299890022949 0.1334145535816785 1.0000000004900403e-15 14.999999999787178 0.961458367606443 DGT(ph)ISEDTIR ddPTM_A549_PD325901_60min_R1 4 DGTISEDTIR 10 0 F5H442;Q99816-2;Q99816 F5H442 TSG101 Tumor susceptibility gene 101 protein 1 DGT(0.999)IS(0.001)EDTIR;DGT(0.98)IS(0.019)EDT(0.001)IR;DGT(0.907)IS(0.088)EDT(0.005)IR;DGT(0.934)IS(0.056)EDT(0.01)IR 146.16 4.0884e-08 37276400.0 2743.1 2680.1 2394.6400000000003 2615.04 3060.7200000000003 2094.221 2502.38 2750.39 2309.3100000000004 2765.4500000000003 2836.64 True False 3021.5774926365116 2905.961432811768 2557.1546705401115 2776.565081613255 2845.7455861107796 2077.1663585127603 2597.6094402548783 2695.531313810785 2212.257731541848 2590.8390150453497 2487.751262942506 1.2145818344646713 1.1681077108065074 1.0278980493875884 1.1160943310422204 1.1439027801938844 0.8349574129271643 1.0441596308074756 1.0835212321920469 0.8892600174686255 1.0414381267285187 1.0 11.280626529914134 -5.9479643785543 0.475022816271081 0.9535215548643646 1.2835456878456855 0.3698674465220949 0.08646371712302288 1.6952023125772315 0.37762541371464453 0.018746946944656676 0.27664157014919694 1.1272899142917777e-06 5.9479643785543 0.33002413298132083 DGT(ph)KRKSLSDSESDDSK ddPTM_A549_PD325901_60min_R1 1 DGTKRKSLSDSESDDSK 17 3 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 DGT(0.317)KRKS(0.317)LS(0.317)DS(0.043)ES(0.006)DDSK 55.383 0.004947399999999999 3165400.0 665.92 810.4 890.15 1354.7 905.03 1188.7 1123.7 1125.8 1146.8 698.22 826.84 True False 733.5237081756059 878.6952520990473 950.5609319067917 1438.3767422530725 841.4638149840031 1179.0196213122285 1166.4630184122336 1103.3450358269858 1098.603984104425 654.1342700410293 725.1439217706097 1.0115560320557262 1.2117529027251663 1.310858304632511 1.983574155515138 1.1604093887036533 1.6259111962675965 1.6085951814421051 1.5215531740690993 1.5150150902760442 0.9020750921331676 1.0 9.502123549893108 -10.709247823270903 0.9469429394512481 0.9977060032766614 1.4504165476352866 0.34245299122604533 0.2558836385708235 0.5697249275665606 0.9009813964683341 0.17529650338882555 0.04477525698247468 1.9532245610323295e-11 10.709247823270903 0.45271054435862523 DGTAPPPQSPGSPGTGQDEEWS(ph)DEESPRK ddPTM_A549_MK2206_60min_R1 2 DGTAPPPQSPGSPGTGQDEEWSDEESPRK 29 1 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DGTAPPPQSPGSPGTGQDEEWS(0.997)DEES(0.003)PRK;DGTAPPPQSPGSPGTGQDEEWS(0.999)DEES(0.001)PRK 193.4 8.944999999999998e-68 92311000.0 3796.3 3761.0 3244.2 2566.3999999999996 5243.7 5067.5 4446.6 3273.2 6089.1 6398.1 5648.7 True False 4437.022629376116 3952.418835470159 3704.2763426697984 3195.168115210074 4472.358676287387 5603.7394864657435 5254.489662277312 3737.1861237545895 4709.9285722946215 4952.764766326569 4245.971893810976 1.0449957607688407 0.9308631649755603 0.8724213054893827 0.7525174907227772 1.0533180124923571 1.3197778097951802 1.2375234207123165 0.8801721295428252 1.1092698421202267 1.166461976242902 1.0 12.051879106024613 -6.936328731117267 13.227072279372134 1.075398093958758 0.9006121439738771 0.3611269470746741 0.12923999299156594 1.0773039209640973 221.98491962348152 0.01920132150412969 0.03629274687407591 1.1579005730973127e-07 6.936328731117267 -0.17478594998488084 DGTAPPPQSPGSPGTGQDEEWS(ph)DEESPRK ddPTM_A549_PD325901_60min_R1 2 DGTAPPPQSPGSPGTGQDEEWSDEESPRK 29 1 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DGTAPPPQSPGSPGTGQDEEWS(0.999)DEES(0.001)PRK;DGTAPPPQSPGSPGTGQDEEWS(0.998)DEES(0.002)PRK 239.41 1.3200999999999998e-120 129062000.0 6796.4 6421.799999999999 5890.200000000001 6145.9 5025.9 6942.8 6350.3 5781.3 7607.9 7057.7 8460.7 True False 7486.365524754762 6962.987623309062 6289.944392649984 6525.518284648384 4672.898122413734 6886.260138678006 6591.964141517499 5665.987436157885 7288.1664201849135 6612.075617525385 7420.087536796232 1.0089322380133465 0.9383969648308851 0.8476914000620794 0.8794395284810756 0.6297632068679543 0.9280564554702389 0.8883943900699195 0.7636011580807154 0.9822210835172602 0.8911047996045984 1.0 12.8572204914754 -8.872685389701994 8.895846792883583 0.992132314523347 0.8589107229975042 0.13822274965830017 0.09858241235454507 0.24248898173433703 18.22779239987151 0.01614506609876643 0.01716362098675548 1.3406475235717252e-09 8.872685389701994 -0.1332215915258429 DGTAPPPQSPGSPGTGQDEEWSDEES(ph)PR ddPTM_A549_PD325901_60min_R1 1 DGTAPPPQSPGSPGTGQDEEWSDEESPR 28 0 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DGTAPPPQSPGSPGT(0.002)GQDEEWS(0.388)DEES(0.61)PR 80.506 5.2481e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DGTS(ph)PEEEIEIER ddPTM_A549_MK2206_60min_R1 2 DGTSPEEEIEIER 13 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 DGT(0.023)S(0.977)PEEEIEIER;DGT(0.069)S(0.931)PEEEIEIER 110.38 5.3911000000000006e-05 52432000.0 731.47 586.4300000000001 883.88 676.5799999999999 885.22 499.51 644.74 696.97 871.61 771.04 717.26 True False 854.9242532754907 616.27678215495 1009.2274748039526 842.34213037283 755.0053106438434 552.367816652097 761.8809123502618 795.7676318811067 674.1917266751597 596.861528489463 539.1445466310589 1.5857050926651077 1.1430641114815416 1.8719051896384578 1.562367894911217 1.4003764210574492 1.0245263911202775 1.4131292194477547 1.4759819733939683 1.2504841807043532 1.1070528900256136 1.0 9.074528306445602 -9.797464442537311 0.20251546663984138 0.7896761714537294 1.5948550725219852 0.3553657774474185 0.20762535065483725 3.3483416960601757 0.3349005377456125 0.8355267397379789 0.34863219270642615 1.5941733968550574e-10 9.797464442537311 0.8051789010682558 DGTS(ph)PEEEIEIER ddPTM_A549_PD325901_60min_R1 2 DGTSPEEEIEIER 13 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 DGT(0.075)S(0.925)PEEEIEIER;DGT(0.02)S(0.98)PEEEIEIER 88.552 0.00019065 71349000.0 688.28 479.28 607.63 667.24 788.87 626.1700000000001 788.2 763.5 712.43 558.9 882.43 True False 758.153678915044 519.6706076333064 648.8674257760193 708.4538993880127 733.4624926537585 621.070679126002 818.1953823195898 748.271393545837 682.4890446420611 523.610958617529 773.8967041846541 0.9796574592132469 0.6714986700722677 0.8384419035091246 0.9154372871175498 0.9477524438180733 0.8025240006420968 1.0572410735120095 0.9668879444759816 0.8818864855628292 0.6765902423233396 1.0 9.595997205361968 -6.281303764225695 3.409432254709799 0.9422694730171116 0.8111824625563184 0.013507512547945688 0.12031697068531506 0.23543601787221502 5.751501707723238 0.01233701704490763 0.03291348478604724 5.232343359853434e-07 6.281303764225695 -0.13108701046079319 DGVLTLANNVT(ph)PAK ddPTM_A549_MK2206_60min_R1 2 DGVLTLANNVTPAK 14 0 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLTLANNVT(1)PAK;DGVLTLANNVT(1)PAK 161.76 3.1476999999999996e-19 7498900.0 2986.1000000000004 3656.4 2693.3 2739.3 4168.200000000001 3708.6000000000004 3201.4 3564.4 5306.3 4561.8 4740.9 True False 3490.08067686432 3842.4951422528848 3075.2504388485827 3410.428622971848 3555.0633015811536 4101.041590430556 3783.0529404071845 4069.664615517188 4104.431522419886 3531.2862116923047 3563.6036878163945 0.9793683536686635 1.0782610747064811 0.8629608419596593 0.957016807068576 0.9976034410716209 1.1508130391860376 1.0615807120587133 1.142008195083804 1.1517643043339887 0.990931237321765 1.0 11.799121186781843 -7.076463665120058 6.507988140261115 1.0832147526725184 0.9703992662849533 0.3828123202146012 0.06881506840338884 0.21592407390586343 15.204253243367244 0.011105407491352335 0.019410885392260397 8.385642334532965e-08 7.076463665120058 -0.11281548638756511 DGVLTLANNVT(ph)PAKDVPPLSETEATPVPIK ddPTM_A549_MK2206_60min_R1 1 DGVLTLANNVTPAKDVPPLSETEATPVPIK 30 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLTLANNVT(1)PAKDVPPLSETEATPVPIK 104.78 8.8953e-15 5319700.0 2544.4 3189.0 2571.6 2927.0 4754.4 2860.3 3215.3 2759.5 4949.4 4817.7 4844.0 True False 2973.8325153925093 3351.3064786796995 2936.291548859395 3644.115131398025 4055.0340581155965 3162.9750474865245 3799.4783904826727 3150.667575614321 3828.3688025676993 3729.3782239620373 3641.10111240115 0.8167398881794288 0.920410165832955 0.8064295547461565 1.000827776791644 1.1136834525975234 0.8686864082718861 1.0434970832153243 0.8653062571878403 1.0514316093911091 1.0242446196454764 1.0 11.830159089255075 -6.277548312285346 20.859665956987552 1.0088026401729762 0.8551149526298072 0.42506033999494564 0.07551677250865291 56.768700736473065 73511.18847644198 0.009990030658827868 0.023334828000484486 5.277784917749197e-07 6.277548312285346 -0.15368768754316897 DGVLTLANNVT(ph)PAKDVPPLSETEATPVPIKDMEIAQTQK ddPTM_A549_MK2206_60min_R1 4 DGVLTLANNVTPAKDVPPLSETEATPVPIKDMEIAQTQK 39 2 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLT(0.016)LANNVT(0.975)PAKDVPPLS(0.003)ET(0.003)EAT(0.003)PVPIKDMEIAQTQK;DGVLT(0.034)LANNVT(0.954)PAKDVPPLS(0.005)ET(0.005)EAT(0.002)PVPIKDMEIAQTQK;DGVLTLANNVT(1)PAKDVPPLSETEATPVPIKDMEIAQTQK;DGVLTLANNVT(0.999)PAKDVPPLSET(0.001)EATPVPIKDMEIAQTQK 234.15 4.253899999999999e-129 102106600.0 11820.369999999999 14901.14 16149.75 14694.77 20147.23 19131.89 17049.4 16510.41 25486.3 23375.66 23576.6 True False 13815.359475699639 15659.54437808505 18440.02739197078 18294.9893096733 17183.599155874195 21156.413901079235 20147.05528899177 18850.81117851002 19713.69374325802 18095.082170899062 17721.87953894239 0.7795651384121819 0.8836277407074387 1.0405232329590277 1.03233910768164 0.9696262249223979 1.1938019245977682 1.136846418841763 1.0637027036035818 1.112392943419956 1.0210588629234607 1.0 14.11324400024336 -5.446503910003886 1.2456454144632658 1.066083139503195 0.6949077325728873 0.6970085993481103 0.06080072414361062 0.49267601503349945 0.8055274965001256 0.009820484512229019 0.21354492350371282 3.576811803165849e-06 5.446503910003886 -0.3711754069303078 DGVLTLANNVT(ph)PAKDVPPLSETEATPVPIKDMEIAQTQK ddPTM_A549_PD325901_60min_R1 4 DGVLTLANNVTPAKDVPPLSETEATPVPIKDMEIAQTQK 39 2 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLT(0.099)LANNVT(0.841)PAKDVPPLS(0.015)ET(0.015)EAT(0.028)PVPIKDMEIAQT(0.002)QK;DGVLT(0.19)LANNVT(0.739)PAKDVPPLS(0.031)ET(0.031)EAT(0.007)PVPIKDMEIAQT(0.002)QK;DGVLTLANNVT(1)PAKDVPPLSETEATPVPIKDMEIAQTQK;DGVLTLANNVT(1)PAKDVPPLSETEATPVPIKDMEIAQTQK 286.58 4.002199999999999e-202 102640400.0 24032.85 22519.92 24387.93 25351.559999999998 30328.61 28953.25 27949.28 29975.87 28618.7 27526.059999999998 27030.02 True False 26472.647239950926 24417.752692066115 26043.041586336672 26917.46828362983 28198.433061624462 28717.464331419447 29012.905144832865 29377.97775723489 27415.955563210067 25788.059873973205 23705.498897414276 1.1167302301677557 1.030045931441229 1.0986076141674186 1.1354946968260562 1.1895313059494506 1.211426279433919 1.223889244870417 1.239289579365881 1.1565230363576324 1.087851387797035 1.0 14.532934135374845 -10.487651479649337 0.9407557571991846 1.0052109347718505 1.1552295270212425 0.28950920663723556 0.06285961871145028 0.401262390585157 0.666864744873033 0.03731959291370059 0.01231089312727129 3.2534828392125414e-11 10.487651479649337 0.15001859224939196 DGVS(ph)LGAVS(ph)STEEASR ddPTM_A549_PD325901_60min_R1 2 DGVSLGAVSSTEEASR 16 0 H3BS66;A0A2R8Y7R4;B2RUZ4 H3BS66 SMIM1 Small integral membrane protein 1 2 DGVS(1)LGAVS(0.708)S(0.129)T(0.113)EEAS(0.049)R;DGVS(0.999)LGAVS(0.728)S(0.141)T(0.125)EEAS(0.006)R 52.522 0.019977 2726900.0 616.53 728.13 665.21 583.14 894.25 516.0 678.52 800.56 621.4000000000001 814.5799999999999 939.8199999999999 True False 679.1196717346023 789.4920704724573 710.3551508326873 619.1592333929708 831.440964995022 511.7978670792547 704.3414499003906 784.5922027728292 595.2847189767093 763.1472797829074 824.2280980098385 0.8239462757632122 0.9578562929105984 0.8618429201187073 0.75119889128747 1.0087510569011169 0.620942028444589 0.8545467590841378 0.9519114971538665 0.7222329843086757 0.9258933074783359 1.0 9.68689983583489 -11.081924241669144 1.4084359099270023 0.9999011768842128 0.8278800939859478 0.14479602300748973 0.10919233293363229 0.4681526426211017 1.6600306311244322 0.07539989786952668 0.016610854967150698 8.280866025436922e-12 11.081924241669144 -0.172021082898265 DGVTKS(ph)PEKR ddPTM_A549_MK2206_60min_R1 1 DGVTKSPEKR 10 2 P11137-4;H7BZB9 P11137-4 MAP2 Microtubule-associated protein 2 1 DGVT(0.083)KS(0.917)PEKR 49.626999999999995 0.0059142 4464200.0 1038.3 1180.5 1175.6 1235.2 1414.0 1184.0 924.54 1226.4 1360.1 1689.2 1308.8 True False 1213.5396560022184 1240.5824076768217 1342.3177573647174 1537.824055450235 1206.0024731144738 1309.2900941244077 1092.5169505603978 1400.2459556924819 1052.0395216333964 1307.60854679965 983.7888389576015 1.2335367183958452 1.2610250884644234 1.364436863084363 1.5631647712934775 1.2258753355977534 1.330864960321871 1.1105197653167138 1.4233196192550306 1.0693753374434616 1.329155703967083 1.0 9.942204877615131 -8.861979340675866 6.033766268724191 1.0304700988689959 1.3127345483216908 0.15405446405230794 0.1433491583108153 0.10940953051806004 5.611281790500318 0.019427419765647526 0.02060959515210921 1.3741073395402872e-09 8.861979340675866 0.2822644494526949 DGVTVAK ddPTM_A549_MK2206_60min_R1 3 DGVTVAK 7 0 P10809;E7EXB4;E7ESH4;P10809-2;C9JL19;C9JCQ4;C9JL25 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;; 114.6 0.020388999999999997 18051600.0 12878.3 14515.0 13132.0 12650.4 16434.8 14360.8 13337.8 14117.9 18147.1 19658.2 19548.2 False True 15051.842195794436 15253.751501422337 14994.31506440411 15749.748567898036 14017.262691047914 15880.45032407247 15761.105612720354 16119.155559255445 14036.810824963894 15217.398966787148 14693.842437126374 1.024363930687287 1.0381050134906349 1.0204488804452228 1.0718604500687814 0.9539548794691733 1.080755451953666 1.0726333619106576 1.0970007081692796 0.9552852417620606 1.0356310156380828 1.0 13.842924089270491 -8.778504698258896 24.999775822368502 0.9788846957625706 1.0438375428406184 0.17412210079642576 0.04163116149337964 187.539014777175 274733.41040208255 0.006754654669427937 0.007199544575025653 1.6653108121205735e-09 8.778504698258896 0.06495284707804772 DGVTVAK ddPTM_A549_PD325901_60min_R1 2 DGVTVAK 7 0 P10809;E7EXB4;E7ESH4;P10809-2;C9JL19;C9JCQ4;C9JL25 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 127.84 0.015995 45655000.0 14774.0 14765.1 16104.4 15937.6 17853.7 16877.2 16886.2 16523.2 16558.8 17026.2 16681.3 False True 16273.845603956033 16009.406795122959 17197.341427624266 16922.02935508421 16599.717703921317 16739.757678817816 17528.813581483206 16193.63181380035 15862.891220778129 15951.162826290523 14629.605851473176 1.112391254362966 1.0943156608358549 1.1755163879478354 1.1566975574656506 1.1346660923369822 1.1442384606098017 1.1981740150380118 1.1069082775165593 1.084300655931941 1.0903344210523804 1.0 13.836603280687845 -9.479553044337699 0.7248692309157435 1.010962033446621 1.1443197066358193 0.4566693208596494 0.03767735582081457 0.21096024560789065 0.2407158344383953 0.011581227341621066 0.007368021634550482 3.31472081637157e-10 9.479553044337699 0.13335767318919833 DGVY(ph)DVPLHNPPDAK ddPTM_A549_MK2206_60min_R1 2 DGVYDVPLHNPPDAK 15 0 A0A087WUD2;Q14511-3;Q14511 A0A087WUD2 NEDD9 Enhancer of filamentation 1;Enhancer of filamentation 1 p55 1 DGVY(1)DVPLHNPPDAK;DGVY(1)DVPLHNPPDAK 133.48 7.7707e-10 28663000.0 3318.6 3765.5 3680.1 3239.8 4937.5 3617.9 3465.5 4214.4 5177.9 4612.8 5375.7 True False 3878.698548019801 3957.1478662491054 4201.993517248973 4033.5511454401476 4211.200290666698 4000.743776632346 4095.1364918414138 4811.804106058705 4005.1139174072223 3570.7652762712655 4040.765328227674 0.9598920583000158 0.9793065285443725 1.0399004089386243 0.9982146494038814 1.042178881621363 0.9900955516234143 1.0134556598063038 1.1908150350738673 0.9911770647576584 0.8836853878464266 1.0 11.980412852557354 -5.584466703190518 6.059772611858813 1.0149586854913262 0.9643791636460501 0.06824286858615258 0.06825035310448653 0.3261913213500295 22.840269399228017 0.0077343070048557895 0.031354996076808916 2.60335441961872e-06 5.584466703190518 -0.05057952184527603 DGVY(ph)DVPLHNPPDAK ddPTM_A549_PD325901_60min_R1 2 DGVYDVPLHNPPDAK 15 0 A0A087WUD2;Q14511-3;Q14511 A0A087WUD2 NEDD9 Enhancer of filamentation 1;Enhancer of filamentation 1 p55 1 DGVY(1)DVPLHNPPDAK;DGVY(1)DVPLHNPPDAK 118.16 3.2509999999999997e-07 31594000.0 6767.4 6690.2 6199.299999999999 7461.1 7752.0 7173.4 7413.200000000001 8327.6 7667.5 7829.4 7879.799999999999 True False 7454.421466103429 7254.006633258943 6620.0217774192815 7921.955201612465 7207.5262629481795 7114.982208733189 7695.313382658691 8161.499485124182 7345.2616394494935 7335.050347826236 6910.63455416774 1.0786884196629578 1.049687489101 0.9579470199920798 1.1463426606511564 1.0429615698027885 1.029570027609434 1.1135465668659499 1.1810057992723775 1.0628925002291771 1.0614148802590835 1.0 12.754602473729925 -10.195583001456063 1.1022614139209572 1.0069133716190084 1.0720508648694322 0.04349922612109791 0.059188614683503483 0.5888353227626388 1.4249200175293444 0.021809230168440847 0.01058820038107087 6.374072494483855e-11 10.195583001456063 0.06513749325042384 DGWNQNHFITPVS(ph)TLER ddPTM_A549_MK2206_60min_R1 2 DGWNQNHFITPVSTLER 17 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 DGWNQNHFIT(0.027)PVS(0.564)T(0.409)LER;DGWNQNHFIT(0.005)PVS(0.595)T(0.4)LER 104.18 4.0868e-09 11683100.0 2709.88 2784.8 2225.79 1658.82 4257.1 4028.2 3536.9 3200.1000000000004 4835.4 3305.8999999999996 3595.4 True False 3167.241493794945 2926.534425157485 2541.440490953398 2065.2309744672593 3630.8862293462703 4454.461450297246 4179.508947624846 3653.7239748952315 3740.1896205471094 2559.094893952735 2702.5629520080693 1.171939951090356 1.082873730279992 0.9403816066763759 0.764174974326775 1.3434973740938891 1.6482359631946684 1.5464982765783015 1.3519477768983796 1.3839417201246167 0.9469140735653414 1.0 11.400112508354514 -6.783587343196604 24.999081856261366 1.2716956167062123 0.9929546225697856 0.33361533685104305 0.21658951965231313 272.75494567116914 307866.2913760974 0.03607463930577424 0.06821266643845462 1.6459349106052022e-07 6.783587343196604 -0.2787409941364267 DGWNQNHFITPVS(ph)TLER ddPTM_A549_PD325901_60min_R1 1 DGWNQNHFITPVSTLER 17 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 DGWNQNHFIT(0.005)PVS(0.592)T(0.402)LER 93.77600000000001 1.2159999999999999e-06 11990000.0 803.43 823.31 1002.6 1049.8 852.24 988.99 997.83 1005.9 787.31 1342.8 988.59 True False 884.9936221460947 892.693223106696 1070.642465123574 1114.6437617312142 792.3816024683902 980.9359933385891 1035.8029666835273 985.8365353867155 754.2220986442757 1258.0153788363182 866.9996971883402 1.0207542459543046 1.02963498834161 1.2348821673129098 1.2856333921983802 0.9139352701483809 1.131414458989711 1.194698187372628 1.137066758597218 0.8699219862362125 1.4509986369269017 1.0 9.759887679340686 -8.751110220558557 24.997609998845938 0.9385742707422664 1.1211419158457454 0.0 0.1854269646611627 160.2124754419053 387730.2489416099 0.01833915288936195 0.020683140180663407 1.7737392625452206e-09 8.751110220558557 0.182567645103479 DGWNQNHFITPVS(ph)TLERDR ddPTM_A549_MK2206_60min_R1 1 DGWNQNHFITPVSTLERDR 19 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 DGWNQNHFIT(0.001)PVS(0.606)T(0.394)LERDR 152.88 5.903899999999999e-22 17956000.0 727.11 861.68 556.08 609.44 917.75 1094.4 911.28 600.51 1238.2 1347.1 1355.3 True False 849.8283918672566 905.5358314671442 634.9405057122934 758.7528273588015 782.7501907360735 1210.2086815960747 1076.8477802006182 685.6341314847452 957.7496769990967 1042.7891743984183 1018.7416056228893 0.8341942521800176 0.8888768520585476 0.6232596197188508 0.7447941884094124 0.7683500766197493 1.1879446907011486 1.057037205761515 0.6730206439988556 0.9401301288892581 1.023605169988935 1.0 9.992572456323717 -7.106793165623208 24.00493694026977 0.9672554235836446 0.7685712284034597 0.38336174241901744 0.13100420751284383 18.587758745240677 4165.579211875202 0.019267675180389403 0.0333726086765517 7.820001464210546e-08 7.106793165623208 -0.19868419518018487 DGWNQNHFITPVST(ph)LER ddPTM_A549_PD325901_60min_R1 1 DGWNQNHFITPVSTLER 17 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 DGWNQNHFIT(0.004)PVS(0.206)T(0.79)LER 104.52 1.1476e-08 12800000.0 668.88 741.75 1020.9 933.91 1189.6 850.15 865.61 907.76 1121.3 1172.8 981.81 True False 736.784205196569 804.259875671851 1090.184413170413 991.5954996365008 1106.0465998972077 843.2266602663339 898.551262229967 889.6540146760562 1074.1756604257866 1098.7492078486996 861.0535942063786 0.8556775212995341 0.934041598668578 1.2661051768504854 1.1516071778905248 1.2845270112560598 0.9792963712595897 1.043548587771879 1.033215610110818 1.2475131253773346 1.2760520544152676 1.0 9.749959227268402 -5.593142818681091 7.078744446436661 1.1202147179466526 0.8746531678306358 0.4164654667182335 0.11199407873149543 0.15140336277929567 12.316253058920758 0.016086452015760824 0.06358983919822776 2.5518619793227203e-06 5.593142818681091 -0.24556155011601677 DGWNQNHFITPVST(ph)LERDR ddPTM_A549_MK2206_60min_R1 1 DGWNQNHFITPVSTLERDR 19 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 DGWNQNHFIT(0.027)PVS(0.179)T(0.794)LERDR 111.97 1.8415e-10 14867000.0 603.08 508.7 546.28 553.27 741.56 740.3 362.3 758.17 882.09 1073.5 1020.6 True False 704.8651601096191 534.5906571666238 623.7507183507973 688.8211748372341 632.477506338592 818.6380546286308 428.1252203128391 865.6429192982462 682.2980234082809 830.9956044218703 767.1568528729587 0.918801881870623 0.696846616392218 0.8130680394952955 0.8978883161346185 0.8244435332487741 1.06710648749715 0.5580673870141869 1.1283780051712538 0.8893852943542297 1.08321473152438 1.0 9.583377771057924 -8.454318198857955 0.02598602360631915 1.794115599766111 4.929289510702127e-07 0.19302678622770097 0.14724209804551558 174.02820718191867 3.571610949951917 121.61807460686242 123.9658520244929 3.5130295358266714e-09 8.454318198857955 -1.79411510683716 DGWNQNHFITPVST(ph)LERDR ddPTM_A549_PD325901_60min_R1 2 DGWNQNHFITPVSTLERDR 19 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 DGWNQNHFIT(0.014)PVS(0.208)T(0.778)LERDR;DGWNQNHFIT(0.001)PVS(0.032)T(0.967)LERDR 161.53 5.6169e-27 45192000.0 2164.5 1806.22 2244.41 2054.93 1838.3899999999999 2450.52 2128.3599999999997 1973.4900000000002 2317.5 2367.4 2745.2 True False 2384.2384465793175 1958.4364983296414 2396.7291593337313 2181.85835901536 1709.2678285012016 2430.5637775873165 2209.355904483279 1934.1271937770455 2220.103534323339 2217.9219599769895 2407.5578032565886 0.9903141030941279 0.813453573442996 0.9955022288942721 0.9062537796866451 0.7099592068731045 1.0095557308321357 0.9176751235192728 0.8033564931071827 0.9221392447235579 0.9212331089109936 1.0 11.233354720932496 -9.939671950744557 0.8782866295736191 0.991972979042926 0.8932247902433043 0.04984525893696545 0.08952682986590442 0.6626089808184334 1.0432121031352077 0.0324678053537369 0.016550868707473708 1.1490212199720367e-10 9.939671950744557 -0.09874818879962177 DGWS(ph)LDRDR ddPTM_A549_MK2206_60min_R1 3 DGWSLDRDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DGWS(1)LDRDR;DGWS(1)LDRDR;DGWS(1)LDRDR 87.806 0.00094408 22818200.0 2350.98 2528.9700000000003 2033.88 1989.52 3252.0800000000004 3380.9100000000003 2656.2400000000002 2934.58 3861.0699999999997 3764.12 4193.2 True False 2747.767948057494 2657.683770895767 2322.3147672243554 2476.9524893129455 2773.7033400043274 3738.6756521335774 3138.8444250725265 3350.565701774333 2986.5438098618156 2913.8026777051246 3151.9127135674007 0.871777932247214 0.8431971353317538 0.7367953932315311 0.7858569428813524 0.8800063935986958 1.1861609098629087 0.9958538545694423 1.0630261705382356 0.9475337933713218 0.9244553839205851 1.0 11.622011867220621 -7.009279239443612 24.489818333710215 0.998315568809785 0.809921091515765 0.6449481682122125 0.0728487612401964 177.89737663093572 469510.17971997935 0.010510856176220171 0.019122976186468812 9.788604026293866e-08 7.009279239443612 -0.18839447729402004 DGWS(ph)LDRDR ddPTM_A549_PD325901_60min_R1 3 DGWSLDRDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DGWS(1)LDRDR;DGWS(1)LDRDR;DGWS(1)LDRDR 86.898 0.00039803 41311000.0 5927.5 5338.299999999999 4360.299999999999 5374.0 4822.1 4985.6 4228.6 3985.1 5698.9 5698.799999999999 7380.6 True False 6529.255436405132 5788.177275765477 4656.216178613923 5705.939774760473 4483.412331341906 4944.9989265704135 4389.521686978708 3905.6140542495305 5459.39505145859 5338.976795436706 6472.832989478213 1.0087168087016358 0.8942262661765468 0.7193474922314147 0.8815212417863478 0.6926507046651488 0.7639620757415895 0.6781453644971235 0.6033855748477097 0.8434320892154955 0.8248284490138051 1.0 12.66018156493606 -9.829730953763374 1.1088859060495786 0.9737725997644608 0.7812783798591825 0.09981498068823946 0.11909465041005798 0.36957035437923247 0.9253463757584873 0.0354341219135659 0.022054469211649014 1.480024982443234e-10 9.829730953763374 -0.19249421990527837 DGWS(ph)LDRDRGDR ddPTM_A549_PD325901_60min_R1 2 DGWSLDRDRGDR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DGWS(1)LDRDRGDR;DGWS(1)LDRDRGDR 46.408 0.012501 19783200.0 3768.5 4016.3 3674.0 4212.5 4432.2 4112.1 3610.8 4319.9 4756.8 4332.6 5056.2 True False 4151.07534577693 4354.767696206077 3923.3397335567647 4472.696557718368 4120.8975622599255 4078.612420962411 3748.210969905574 4233.736205604008 4556.88823821759 4059.038896593858 4434.319453892599 0.9361245595720381 0.9820599849619114 0.8847670481008583 1.008654564522202 0.9293190545039463 0.9197831738040577 0.8452731042223999 0.9547657198868449 1.0276409459443423 0.9153690749615916 1.0 12.114496992157623 -8.63494093271441 5.136972618396298 1.0128684439091857 0.9303778358664478 0.08224565156327124 0.050676095642687914 0.13895799090653047 5.779084999507227 0.006964537472819951 0.007894428352092078 2.3177098543430194e-09 8.63494093271441 -0.08249060804273789 DGWS(ph)LDRDRGDRDLPSSR ddPTM_A549_MK2206_60min_R1 1 DGWSLDRDRGDRDLPSSR 18 3 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DGWS(1)LDRDRGDRDLPSSR 47.808 0.0063504 4117500.0 363.73 509.04 413.95 394.86 421.7 460.86 467.61 291.6 780.7 571.58 770.48 True False 425.11873165528937 534.947961714366 472.6543345195003 491.60071772593886 359.668488622612 509.62789930589065 552.5686841581195 332.93519298754694 603.8726965217209 442.45968102044964 579.1485518337818 0.7340409128352623 0.9236800472357884 0.8161193410963656 0.8488335439488943 0.6210297642699424 0.879960586437167 0.9541052678254976 0.5748701122248525 1.0426905059326386 0.7639830568849243 1.0 9.177789637308098 -8.825036301383319 24.999986208881456 1.0201598071817497 0.803385788024021 0.09617591423338445 0.1355464531096592 38.78512004152862 15246.110587150608 0.018080816255437202 0.019248495347169003 1.4961105954354068e-09 8.825036301383319 -0.21677401915772865 DGYES(ph)SYR ddPTM_A549_PD325901_60min_R1 1 DGYESSYR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 DGYES(0.922)S(0.077)YR 56.916000000000004 0.017784 2146800.0 972.01 790.77 680.2 573.73 893.76 527.19 655.7 664.61 911.14 653.55 723.21 True False 1070.6877396440575 857.410963107556 726.3624623748805 609.1679990646312 830.9853809046141 522.8967394292877 680.6530223128078 651.3538321735414 872.8479543746998 612.2847414644594 634.2597548059153 1.6880902998042022 1.351829367401571 1.1452129145371186 0.9604393065283445 1.310165708304947 0.8244204924988423 1.0731455324973107 1.0269512250116781 1.376167962354466 0.9653532907062969 1.0 9.308929992636106 -5.388499144860416 2.188894336812667 1.132897743971607 1.7555946709470478 0.5575267888616462 0.15871143979003208 0.3280183599352025 2.1536511931932547 0.02476331881919892 0.3547717734436511 4.087905570318762e-06 5.388499144860416 0.6226969269754408 DGYESS(ph)YR ddPTM_A549_PD325901_60min_R1 1 DGYESSYR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 DGYES(0.094)S(0.905)Y(0.001)R 66.27 0.0085585 2204000.0 771.61 910.67 477.69 885.32 866.65 680.89 862.18 526.57 807.76 981.74 1082.1 True False 849.9432791707409 987.415356896643 510.10891598332324 940.0042056923975 805.7794937801914 675.3450575883603 894.9907317029989 516.0671482638265 773.8126562610665 919.752768855203 949.0085599970699 0.8956118153174141 1.0404704430692295 0.5375177184754774 0.9905118302571473 0.8490750534248914 0.7116322086604208 0.9430797249139272 0.5437960941737131 0.8153905969651692 0.9691722578962225 1.0 9.89027729009764 -10.452234256057938 1.0154123740807999 0.990074888474267 0.8148106509604814 0.14794677365786346 0.15619329586569614 0.6668621656752955 1.3213771734942459 0.07275489857333918 0.026591445836136353 3.5299271609967865e-11 10.452234256057938 -0.1752642375137855 DGYGGS(ph)RDSYSSSR ddPTM_A549_MK2206_60min_R1 2 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DGYGGS(0.945)RDS(0.051)YS(0.001)S(0.002)S(0.001)R;DGY(0.016)GGS(0.91)RDS(0.034)Y(0.016)S(0.013)S(0.005)S(0.006)R 54.763999999999996 0.0048270000000000006 16791300.0 2309.6 2084.7799999999997 1979.15 1564.94 2591.0 1690.06 1582.15 1722.38 2612.8999999999996 2987.0 3062.1 True False 2699.404015701359 2190.8863971846527 2259.823230255513 1948.3503702528258 2209.8673322769446 1868.9010274289674 1869.6061753186825 1966.5326395675281 2021.0823219439023 2312.234625438405 2301.696060339299 1.1727890846298068 0.9518573867922806 0.981807836922824 0.8464846440088246 0.9601038861539269 0.8119669054625169 0.8122732655861952 0.8543841532568103 0.878083929833016 1.004578608479502 1.0 11.168481622393106 -4.6841965962202785 1.3025506335864596 0.9135790561156037 1.8441429220352406 0.5553760163237333 0.06861522030565675 3.432875340539327 1.7282770925577706 0.011019883033264113 6.159915508279881 2.069204450259594e-05 4.6841965962202785 0.9305638659196368 DGYGGS(ph)RDSYSSSR ddPTM_A549_PD325901_60min_R1 2 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DGY(0.002)GGS(0.918)RDS(0.052)YS(0.013)S(0.013)S(0.003)R;DGYGGS(0.985)RDS(0.015)YS(0.001)SSR 77.505 0.00019943 11840200.0 1597.3400000000001 1957.26 1919.65 1766.46 2083.7799999999997 1943.99 1639.0700000000002 1801.17 1766.73 2313.05 2036.7 True False 1759.5007809004428 2122.2051692045666 2049.928992793207 1875.5702222782636 1937.4224814507443 1928.1587899678295 1701.4457057835184 1765.2442513594694 1692.480482069071 2167.003628252417 1786.1988117050478 0.985053158344048 1.1881125187731918 1.1476488391773203 1.0500344138555913 1.0846622832546524 1.0794760232357736 0.9525511352005509 0.9882686293327136 0.9475319717929293 1.2131928506792955 1.0 10.802676952298118 -7.698338207806498 5.55949382868421 0.9742543040760433 1.0955548229326266 0.025292036919255967 0.08788025828153555 0.11007589962378828 6.598813248705939 0.0076356180327451385 0.011315880099520633 2.0029116479099868e-08 7.698338207806498 0.12130051885658333 DGYGGSRDS(ph)YSSSR ddPTM_A549_MK2206_60min_R1 7 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DGYGGS(0.003)RDS(0.951)YS(0.037)S(0.007)S(0.002)R;DGYGGS(0.007)RDS(0.992)YSSSR;DGYGGSRDS(0.999)YS(0.001)SSR;DGYGGS(0.001)RDS(0.998)YS(0.001)SSR;DGYGGS(0.078)RDS(0.918)YS(0.002)S(0.001)S(0.001)R;DGYGGSRDS(0.999)YS(0.001)SSR;DGYGGS(0.002)RDS(0.934)YS(0.054)S(0.01)S(0.001)R 166.48 1.4132e-20 366752300.0 10682.039999999999 10801.95 10215.51 9397.85 14825.64 12165.880000000001 10706.02 11275.689999999999 16708.44 18246.379999999997 16718.86 True False 12484.907201196125 11351.723116141164 11664.222927472641 11700.323671885522 12644.807995406543 13453.26534654245 12651.165253032472 12874.05358785237 12924.005017895966 14124.510085338725 12567.105644937878 0.9934592382634372 0.9032885882290423 0.9281550785857423 0.931027716521067 1.0061829949285073 1.0705142239304342 1.0066888598273585 1.024424712546133 1.0283994885570051 1.1239270588155024 1.0 13.617364797604496 -6.803922202235073 5.341118921657722 1.0183170722393373 0.9354685379897396 0.5373628999235507 0.041580001678835285 0.08182916928601068 5.447368502756274 0.0038083914497184994 0.007432997101853171 1.5706441380014464e-07 6.803922202235073 -0.0828485342495977 DGYGGSRDS(ph)YSSSR ddPTM_A549_PD325901_60min_R1 9 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DGYGGSRDS(0.548)Y(0.002)S(0.119)S(0.147)S(0.183)R;DGYGGSRDS(1)YSSSR;DGYGGS(0.002)RDS(0.998)YSSSR;DGYGGS(0.033)RDS(0.956)YS(0.009)S(0.002)SR;DGYGGSRDS(1)YSSSR;DGYGGSRDS(0.998)YS(0.002)SSR;DGYGGS(0.001)RDS(0.999)YSSSR;DGYGGS(0.007)RDS(0.986)YS(0.007)SSR;DGYGGSRDS(1)YSSSR 206.67 2.5581e-32 464679400.0 18514.75 18670.030000000002 21433.449999999997 19015.34 21986.34 23096.95 21470.399999999998 21658.59 22798.19 22658.34 24669.010000000002 True False 20394.353790161444 20243.418950575975 22888.05280680516 20189.874364829517 20442.095327155334 22908.856096969357 22287.467821053677 21226.592431614827 21840.061357141316 21227.688545503494 21634.87815973876 0.9426609033608583 0.9356844444008837 1.0579238134744149 0.9332095247202126 0.944867596490415 1.0588853760961499 1.0301637779744628 0.9811283555604334 1.009483908154583 0.9811790197648063 1.0 14.40107137556529 -7.230738205383593 24.995354224823792 1.0081778205825191 0.9649920352727396 0.2744168102768483 0.03813002141327843 767.0131359039501 624464.5347525461 0.005321213476988141 0.009216187759701143 5.878436004457397e-08 7.230738205383593 -0.04318578530977957 DGYNYTLSK ddPTM_A549_PD325901_60min_R1 2 DGYNYTLSK 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 ; 133.23 8.3967e-10 16112000.0 8990.7 8331.0 8702.3 9479.7 10492.0 8358.5 9196.5 9036.0 9373.4 9019.1 10080.0 False True 9903.429245396475 9033.082607647044 9292.890409181013 10065.239539039241 9755.07811543503 8290.431147251842 9546.477840017902 8855.76989139513 8979.468594876542 8449.632486790762 8840.223902384683 1.12026905141226 1.021816043054106 1.0512053214708985 1.1385729196659946 1.1034876744245767 0.9378078246429332 1.079890955866254 1.0017585515007434 1.0157512630934944 0.9558165698169073 1.0 13.109867194863554 -7.232138321522901 24.952495192991172 1.008823832246655 1.0843137455665859 0.47730067753249017 0.04541321808220438 491.90959407740445 418905.9773475787 0.0059144094348877315 0.01024289856458622 5.859515109479909e-08 7.232138321522901 0.07548991331993093 DHANYEEDENGDIT(ph)PIK ddPTM_A549_MK2206_60min_R1 2 DHANYEEDENGDITPIK 17 0 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 DHANYEEDENGDIT(1)PIK;DHANYEEDENGDIT(1)PIK 242.34 3.3336999999999995e-74 164550000.0 17151.3 16345.400000000001 14411.1 7998.9 21288.0 18078.0 15246.0 16689.6 22090.0 27478.0 24791.0 True False 20046.020130974506 17177.311043151818 16454.81067808666 9958.630859084262 18156.563400043073 19991.001960794816 18016.000852579476 19055.401909756398 17086.650270481376 21270.70071570018 18634.710503207447 1.0757355273925044 0.9217911402592073 0.8830193887506017 0.5344129632370818 0.9743410501020623 1.0727830709982815 0.9667980004024491 1.0225756877992036 0.9169259843097849 1.1414559250619438 1.0 14.185704786014593 DHANYEEDENGDIT(ph)PIK ddPTM_A549_PD325901_60min_R1 2 DHANYEEDENGDITPIK 17 0 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 DHANYEEDENGDIT(1)PIK;DHANYEEDENGDIT(1)PIK 196.61 4.124799999999999e-48 171099000.0 32305.0 30378.0 28240.0 29229.0 36065.0 30491.0 29195.0 22284.0 31393.0 33369.0 39501.0 True False 35584.57981831596 32938.06067160025 30156.536220915343 31034.408946124673 33531.918817495665 30242.69140525882 30306.031701116983 21839.528138540194 30073.661382098227 31262.075645210836 34642.62741746996 1.0271905588884687 0.9507956851734026 0.8705037252950301 0.89584454932175 0.9679380958439032 0.8729906955616107 0.8748190873603868 0.6304235494426361 0.8681114460426971 0.9024164151430863 1.0 15.08026073277823 -5.404288594539402 3.104481552035031 0.9034698432604215 1.0301805298960516 0.15373707114096324 0.09164913329289266 0.5121133036503971 7.992129624566702 0.014362464594294994 0.12885045445737991 3.941952669516294e-06 5.404288594539402 0.12671068663563012 DHANYEEDENGDIT(ph)PIKAK ddPTM_A549_MK2206_60min_R1 2 DHANYEEDENGDITPIKAK 19 1 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 DHANYEEDENGDIT(1)PIKAK;DHANYEEDENGDIT(1)PIKAK 187.18 8.243199999999999e-44 56752000.0 19153.4 24319.5 15839.4 16356.0 30025.0 20328.9 18074.8 19002.0 28080.0 28523.3 35449.0 True False 22386.025664329092 25557.25867301691 18085.665095272805 20363.220734248753 25608.362273876985 22480.090704768303 21358.75719599919 21695.591691184385 21719.924834545807 22079.866719707818 26646.034957371667 0.8401259587080128 0.9591392758398546 0.6787375729336937 0.7642120400587119 0.9610571447063418 0.8436561289787377 0.8015735635778057 0.8142146374082673 0.8151278368167477 0.8286361087130297 1.0 14.701633249384871 -10.68843378740567 0.8254147304919441 1.0063547767890162 0.8303323903259104 0.0 0.09047216936498237 0.5489196253851957 0.6275994416712222 0.061698738861250615 0.014124480616076041 2.0491144344023463e-11 10.68843378740567 -0.17602238646310575 DHANYEEDENGDIT(ph)PIKAK ddPTM_A549_PD325901_60min_R1 2 DHANYEEDENGDITPIKAK 19 1 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 DHANYEEDENGDIT(1)PIKAK;DHANYEEDENGDIT(1)PIKAK 189.09 6.037499999999999e-44 116807000.0 15653.5 14362.599999999999 14801.4 15707.4 16708.1 16538.3 14853.7 13020.1 16287.1 17509.199999999997 19530.7 True False 17242.631796502366 15572.986707549084 15805.912012048737 16677.610423906346 15534.580695815852 16403.617568055884 15418.965681756528 12760.40389142915 15602.609826915936 16403.666123861232 17128.547715307985 1.0066604643365311 0.9091831348685401 0.9227817953254033 0.9736733493757541 0.9069409125639072 0.9576770804331401 0.9001910692040994 0.7449787397926928 0.9109125937730085 0.9576799152213636 1.0 14.064115213823431 -10.48951189498505 1.113626243258536 0.9942689981815575 0.9138272629376915 0.12138674341071887 0.0635604018708801 0.5754689458852849 1.3841849297543516 0.029902110695532422 0.01133805169113639 3.239575493702782e-11 10.48951189498505 -0.080441735243866 DHAPS(ph)IPTS(ph)PFGDSLESSTELRR ddPTM_A549_MK2206_60min_R1 3 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 DHAPS(0.997)IPT(0.057)S(0.944)PFGDSLESSTELRR;DHAPS(0.999)IPT(0.452)S(0.549)PFGDSLESSTELRR;DHAPS(0.671)IPT(0.386)S(0.938)PFGDS(0.005)LESSTELRR 80.359 1.5296e-05 21183100.0 1949.32 2134.84 2158.7799999999997 1351.6100000000001 2416.2 2799.34 2577.0 1954.28 3911.2799999999997 2258.9700000000003 2943.25 True False 2278.3175597016684 2243.494237361106 2464.9274653315792 1682.7545106760783 2060.7801807207857 3095.5643007484987 3045.2075427716977 2231.3051747314917 3025.3813250307103 1748.6671080771987 2212.3597954324277 1.0298133081271026 1.0140729559418669 1.1141621134232302 0.7606152101255154 0.9314850979372393 1.3992137748749136 1.376452215891259 1.0085634259572869 1.3674906456340523 0.7904081025552194 1.0 11.111370314391712 -7.228180239340905 24.762993148121613 1.1948445105974876 0.9688497611119609 0.17382175825334634 0.19363128892449658 605.6611061302142 450943.39741277904 0.02639572527192193 0.04571707721673932 5.913161773219567e-08 7.228180239340905 -0.22599474948552678 DHAPSIPT(ph)S(ph)PFGDSLESSTELRR ddPTM_A549_MK2206_60min_R1 1 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 DHAPS(0.646)IPT(0.704)S(0.646)PFGDS(0.001)LES(0.001)S(0.001)T(0.001)ELRR 58.093 0.001111 7592800.0 1537.9 1168.0 1270.7 1062.0 2375.2 1711.0 1244.1 1369.6 1964.4 1618.6 1852.5 True False 1797.4599219549368 1227.4462110686386 1450.9043673726997 1322.1900476749909 2025.8112264084134 1892.0568843301203 1470.1368661087595 1563.744994224089 1519.4665365022006 1252.9571358334786 1392.4731236009757 1.2908399390191845 0.881486464811922 1.0419622057915339 0.9495264398753847 1.4548296782702759 1.358774436835956 1.0557739615878137 1.122998331328794 1.0911999023527408 0.8998070516386667 1.0 10.443433766753941 -9.581897452050233 0.8474699050401024 1.0147435539675214 1.140513483045564 0.14483631788710505 0.1662410741358915 1.0268837753403663 1.5653133688110552 0.0562470086302345 0.036036393488147446 2.618801300672286e-10 9.581897452050233 0.12576992907804274 DHAPSIPT(ph)SPFGDSLESSTELR ddPTM_A549_MK2206_60min_R1 1 DHAPSIPTSPFGDSLESSTELR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPS(0.004)IPT(0.531)S(0.464)PFGDSLESSTELR 81.297 1.8467e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DHAPSIPTS(ph)PFGDSLESSTELR ddPTM_A549_MK2206_60min_R1 1 DHAPSIPTSPFGDSLESSTELR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPS(0.002)IPT(0.242)S(0.757)PFGDSLESSTELR 90.694 5.3323e-07 5691500.0 721.09 1065.7 786.27 823.59 1227.6 829.05 863.0 743.53 1386.6 1377.2 1373.2 True False 842.7923630421255 1119.9395780272664 897.7749090533827 1025.3695869723601 1047.0216661918862 916.7795207211495 1019.7959291470614 848.9276544651266 1072.5373139452 1066.0895634930596 1032.1965416080218 0.8165037655805063 1.0850061329236318 0.8697712817897757 0.9933859934998173 1.0143626954618243 0.8881830966929338 0.9879861906515963 0.8224476834059266 1.03908245252821 1.0328358219765366 1.0 10.01150198663064 DHAPSIPTS(ph)PFGDSLESSTELR ddPTM_A549_PD325901_60min_R1 1 DHAPSIPTSPFGDSLESSTELR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.14)S(0.86)PFGDSLESSTELR 99.711 2.9253e-08 8178400.0 760.25 966.19 956.83 1055.5 1240.8 905.52 820.82 875.06 995.22 1181.5 979.01 True False 837.4300203335306 1047.6142221441003 1021.7662376862057 1120.6958377855753 1153.6504885276192 898.1457453441986 852.0567542699389 857.6062418287102 953.3943643707763 1106.8998883639492 858.5979764557164 0.9753459049489414 1.2201452261378962 1.1900403514856233 1.3052626124415017 1.3436445462984627 1.0460608689665623 0.9923815075679777 0.998844937148466 1.110408352354123 1.2891946157772471 1.0 9.745838962419834 -7.337235728866537 12.497612743532589 1.0435165564166737 1.2121370313927988 0.221263332299809 0.11829509655423048 0.8900302639993325 145.64105506463912 0.0142895726881834 0.022844811497578905 4.6000682064809264e-08 7.337235728866537 0.1686204749761251 DHAPSIPTS(ph)PFGDSLESSTELRR ddPTM_A549_PD325901_60min_R1 4 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPS(0.001)IPT(0.161)S(0.832)PFGDS(0.001)LES(0.002)S(0.002)T(0.002)ELRR;DHAPS(0.001)IPT(0.336)S(0.663)PFGDSLESSTELRR;DHAPSIPT(0.017)S(0.982)PFGDS(0.001)LESSTELRR;DHAPSIPT(0.037)S(0.963)PFGDSLESSTELRR 111.65 3.2455e-11 59168100.0 5819.66 6225.280000000001 6028.79 6976.87 7517.77 6951.91 7052.55 6952.1 8162.910000000001 8693.71 9170.1 True False 6410.46759899274 6749.906193222057 6437.939943459361 7407.815414278582 6989.747770098547 6895.295949858412 7320.938649553444 6813.434911683059 7819.851279984178 8144.787666922166 8042.235834053344 0.7971001760292596 0.839307169362137 0.8005161843425566 0.9211139249251523 0.8691299178894715 0.8573854450601375 0.9103113612453763 0.84720655452963 0.9723479193276676 1.0127516569999833 1.0 12.973380927643255 -8.290653861440065 0.3704759198003916 1.011817720399114 0.8123607395897807 0.7445563040691972 0.03661828282589576 0.3985318114824544 0.14211739522741454 0.019632153106969176 0.027286942410895007 5.120898154260482e-09 8.290653861440065 -0.19945698080933338 DHFGLEGDEESTMLEDS(ph)VSPK ddPTM_A549_MK2206_60min_R1 1 DHFGLEGDEESTMLEDSVSPK 21 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.696)VS(0.304)PK 125.11 6.2483e-16 26626000.0 851.48 898.45 653.56 762.74 1083.3 1052.7 1042.4 1079.8 1324.1 1199.2 1155.4 True False 995.1890073126921 944.1772674097755 746.2446355080681 949.6113342406999 923.948005038833 1164.096015274294 1231.790586955848 1232.8649567488105 1024.1934641532087 928.2998871194293 868.4822925822234 1.1458944135219347 1.0871577641525554 0.8592514112052752 1.0934147332091928 1.0638651045972343 1.3403796775327843 1.4183255058585187 1.4195625717171305 1.1792911299411937 1.068876009388001 1.0 9.76235262401351 -4.867832757219593 16.008808893632494 1.1288024465806699 3.3796930281624697 0.0 0.16941651773626526 1737.569850481967 215061.63283506787 0.025381442920321903 3124.7887527625758 1.3557113837320164e-05 4.867832757219593 2.2508905815817997 DHFGLEGDEESTMLEDSVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DHFGLEGDEESTMLEDSVSPK 21 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.005)VS(0.995)PK;DHFGLEGDEESTMLEDS(0.006)VS(0.994)PK 173.55 8.403899999999999e-36 30095800.0 2055.01 1695.1100000000001 1816.51 1033.88 2272.48 1929.54 2156.73 2165.19 2875.3999999999996 2200.15 2167.58 True False 2401.8454478292583 1781.383858599795 2074.1184326561606 1287.1806464126375 1938.2012023360521 2133.7226420750094 2548.579923834696 2472.1123131162785 2224.126491070264 1703.1345869294623 1629.310063835359 1.4741487830593574 1.0933363134125973 1.2730041253005784 0.7900157710820515 1.1895840118814283 1.309586609348177 1.564208053705503 1.5172755437948884 1.3650725791472254 1.0453102971206856 1.0 10.67004546494717 -7.002342359937228 24.9853153379258 1.2465034328216775 1.1398410082221955 0.0565724752885286 0.22311207932035348 301.2039246844103 3212941.282647462 0.036485302717610205 0.06814300289537008 9.946210356420691e-08 7.002342359937228 -0.10666242459948205 DHFGLEGDEESTMLEDSVS(ph)PK ddPTM_A549_PD325901_60min_R1 3 DHFGLEGDEESTMLEDSVSPK 21 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.003)VS(0.997)PK;DHFGLEGDEESTMLEDS(0.012)VS(0.988)PK;DHFGLEGDEESTMLEDS(0.016)VS(0.984)PK 190.24 2.2095e-45 66832000.0 7801.3 6180.799999999999 6374.5 6629.0 7640.1 6801.900000000001 6424.7 6176.8 6916.1 6227.5 7951.799999999999 True False 8593.282232986476 6701.677707519489 6807.111902982465 7038.458274448673 7103.48573291414 6746.507581562755 6669.195474230741 6053.59887839414 6625.440368385613 5834.294587208198 6973.779010613342 1.2322274938607065 0.960982230340287 0.9761008905821037 1.0092746362821214 1.018599201681527 0.9674105777219634 0.956324463978704 0.8680514351230824 0.9500502322058678 0.8366044548198371 1.0 12.76772493249571 -5.2600484644821766 24.84872145500478 0.9713577431475325 1.232227586404682 0.6634234296467194 0.05571535367570006 39.13271221286538 699025.0660642534 0.005675502063389333 0.04936730813293483 5.494795520379761e-06 5.2600484644821766 0.26086984325714957 DHFGLEGDEESTMLEDSVS(ph)PKK ddPTM_A549_MK2206_60min_R1 2 DHFGLEGDEESTMLEDSVSPKK 22 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.054)VS(0.946)PKK;DHFGLEGDEESTMLEDS(0.036)VS(0.964)PKK 118.57 2.0194000000000004e-15 41119000.0 3167.2 3775.7000000000003 3552.8 2124.69 3705.5 3765.2999999999997 3067.0 3288.8 5039.4 5548.4 4933.9 True False 3701.7459293944175 3967.8670026813866 4056.6404630532234 2645.239145380958 3160.4258586461697 4163.7415467961455 3624.2342001089646 3754.997471527586 3897.983946268166 4295.012586468844 3708.6764612873712 0.9981312654351768 1.0698876119552483 1.0938243077815057 0.7132569187398815 0.8521708193302765 1.122702826805984 0.9772311599407907 1.0124899032643402 1.0510444863435409 1.1580984837318329 1.0 11.856688699697491 -7.2609022561472365 24.99999833864475 1.0259540296684202 0.9477100932432376 0.1695933284558967 0.11020472144796413 87.36471797513094 4066297.8202973246 0.01579924035598496 0.02629696226329939 5.484003759616918e-08 7.2609022561472365 -0.07824393642518257 DHFGLEGDEESTMLEDSVS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 DHFGLEGDEESTMLEDSVSPKK 22 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEEST(0.001)MLEDS(0.32)VS(0.678)PKK;DHFGLEGDEESTMLEDS(0.009)VS(0.991)PKK 171.29 1.6380999999999998e-40 52228000.0 6931.6 7144.799999999999 6784.4 6040.6 7292.9 6805.700000000001 6881.7 6895.8 7293.5 8692.099999999999 9414.8 True False 7635.290929225784 7746.917370677785 7244.830181911403 6413.714142802033 6780.671863139164 6750.276635622644 7143.586859310729 6758.257859349551 6986.979558829463 8143.279322596928 8256.839285334447 0.9247232101013957 0.9382424803202395 0.8774338377615579 0.7767759455114843 0.8212188258505639 0.8175376075942625 0.8651720849161926 0.8185042273201767 0.8462051055346964 0.9862465576943927 1.0 13.011373908917546 -10.596540080819386 0.8270805933067141 1.0024890590464155 0.8521312226064364 0.577159868543598 0.04566047569481435 0.3920602667626075 0.467536203164965 0.03652066473215737 0.009411076288353207 2.531977949525659e-11 10.596540080819386 -0.15035783643997913 DHLPPPS(ph)SASPSR ddPTM_A549_MK2206_60min_R1 2 DHLPPPSSASPSR 13 0 Q2YD98-2;Q2YD98 Q2YD98-2 UVSSA UV-stimulated scaffold protein A 1 DHLPPPS(0.331)S(0.244)AS(0.181)PS(0.244)R;DHLPPPS(0.369)S(0.269)AS(0.269)PS(0.093)R 58.83 0.0032722999999999997 8890600.0 4826.4 4082.9 3152.2 2395.46 3103.54 2311.56 2376.6 2416.88 3239.3 6025.0 7230.9 True False 5640.978325849087 4290.702170524097 3599.2293592761653 2982.347807536286 2647.013377234578 2556.167744910655 2808.3974567913156 2759.4801413845757 2505.603722099156 4663.94831545577 5435.267967312444 1.0378473259779977 0.7894186995615055 0.6621990637668344 0.5487029941250451 0.48700696877387567 0.4702928650957744 0.5166989877373006 0.5076990054547477 0.4609899157075217 0.8580898574835004 1.0 12.408135448816742 -10.874992429823111 1.1256641272112893 0.9997895910781743 0.5909082483029532 0.3338054347015307 0.16968726349000865 0.3893549669413605 0.876663757025378 0.12374025338683624 0.029936005427146018 1.3335446769466004e-11 10.874992429823111 -0.40888134277522115 DHLPPPSS(ph)ASPSR ddPTM_A549_PD325901_60min_R1 2 DHLPPPSSASPSR 13 0 Q2YD98-2;Q2YD98 Q2YD98-2 UVSSA UV-stimulated scaffold protein A 1 DHLPPPS(0.113)S(0.368)AS(0.368)PS(0.152)R;DHLPPPS(0.195)S(0.356)AS(0.356)PS(0.094)R 50.178000000000004 0.008859 12965500.0 3959.9 3593.3 3231.1000000000004 3281.5 4255.7 3002.2 3039.8 3041.6 3733.6000000000004 3715.0 4506.799999999999 True False 4361.906132875697 3896.120001687447 3450.3818761827056 3484.1908021727736 3956.7943133679782 2977.7510785762374 3155.4812524423874 2980.932901910961 3576.68977594374 3480.4342659941344 3952.492170959056 1.1035837502537795 0.9857375633313574 0.8729636206579721 0.8815174455683613 1.0010884632335346 0.7533856993962618 0.7983523093675662 0.7541907163822794 0.9049201418344293 0.8805670234002314 1.0 11.948546889578502 -5.40516812620674 2.9170001182757828 0.9111476874264116 1.1107045232475092 0.3356982642749474 0.08634712539400392 0.34283592068393715 4.665586140507724 0.013896234795783903 0.1331161055347661 3.933977519092234e-06 5.40516812620674 0.19955683582109762 DHLS(ph)DKESK ddPTM_A549_PD325901_60min_R1 1 DHLSDKESK 9 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 DHLS(0.999)DKES(0.001)K 42.556000000000004 0.021428 3909100.0 1908.7 1737.6 2123.7 2010.8 2098.2 2098.6 1798.9 1486.4 2256.9 2078.5 2520.1 True False 2102.469818889324 1884.0336501077313 2267.827052845535 2135.002549141862 1950.8296703970432 2081.5096973886125 1867.3581238958516 1456.7525859417588 2162.050341581163 1947.2631552809703 2210.1436762301214 0.9512819648338616 0.8524484948061651 1.0260993786222103 0.9660017002983132 0.8826709735561652 0.9417983635068821 0.844903498346784 0.6591212153349983 0.9782397247897513 0.8810572707211729 1.0 11.109924443530884 -8.965854830793397 24.99999731286764 0.9904001489415981 0.8913831564069569 0.043292719852781936 0.09515143339815704 209.5640057939571 153437.0443854768 0.01587267202402603 0.016815194950702723 1.0817954966465667e-09 8.965854830793397 -0.09901699253464125 DHLS(ph)FR ddPTM_A549_MK2206_60min_R1 1 DHLSFR 6 0 Q15393;Q15393-3 Q15393 SF3B3 Splicing factor 3B subunit 3 1 DHLS(1)FR 51.787 0.028314 1586300.0 90.846 0.0 0.0 0.0 163.03 0.0 0.0 85.601 125.07 139.37 0.0 True False 106.17858382854425 0.0 0.0 0.0 139.04850296453512 0.0 0.0 97.73520389206793 96.74184469574946 107.88622020333125 0.0 0.0 DHNIPES(ph)PKPVK ddPTM_A549_MK2206_60min_R1 2 DHNIPESPKPVK 12 1 P35580-5 P35580-5 MYH10 Myosin-10 1 DHNIPES(1)PKPVK;DHNIPES(1)PKPVK 70.281 0.0013280999999999998 19103900.0 3690.3 3412.0 2696.7 1821.13 3989.7 3089.4 2934.6 2954.8999999999996 4450.1 4472.4 4688.8 True False 4313.132420827301 3585.656226169688 3079.132609973999 2267.3069317536324 3402.820415123631 3416.318257422251 3467.7788339223252 3373.7661240017233 3442.159455349442 3462.0817337833014 3524.4415557032416 1.2237775411108185 1.0173686155661708 0.8736512043989934 0.6433095558315282 0.965492081892292 0.9693218637414981 0.9839229220047003 0.9572484238083915 0.9766538615966972 0.9823064672986194 1.0 11.783178966672079 -6.9854740995157325 24.988668199383483 0.9837447185137126 0.9233839655490668 0.012964280241294701 0.12835006261807957 694.3573187135771 1194484.4729650202 0.01875865802899003 0.0354411572570491 1.0340127656682124e-07 6.9854740995157325 -0.060360752964645825 DHNIPES(ph)PKPVK ddPTM_A549_PD325901_60min_R1 2 DHNIPESPKPVK 12 1 P35580-5 P35580-5 MYH10 Myosin-10 1 DHNIPES(1)PKPVK;DHNIPES(1)PKPVK 74.789 0.00054647 18642500.0 4343.5 4006.3 4036.1000000000004 4344.2 4561.6 4685.9 3699.2 3813.5 5075.0 5361.2 5807.200000000001 True False 4784.448922484299 4343.924961111072 4310.0140170409495 4612.531367605966 4241.20895266569 4647.739584005196 3839.9750802799113 3737.4367508671253 4861.715398787899 5022.692917051884 5092.951214873841 0.9394256337094751 0.8529288378857318 0.8462704304831464 0.9056696545875365 0.8327605692116864 0.9125827811645995 0.7539783748694385 0.7338449934395663 0.9545968915997813 0.9862047966183596 1.0 12.314286182459742 -8.949391105721904 12.206078097670328 0.9799945096205182 0.8476183924482459 0.505563816274258 0.059100515577766244 0.5022288018433793 120.22456903112203 0.010533043662516974 0.011182333221041714 1.123592662117871e-09 8.949391105721904 -0.13237611717227227 DHNIPQES(ph)PKPVK ddPTM_A549_MK2206_60min_R1 2 DHNIPQESPKPVK 13 1 P35580-2;P35580-4 P35580-2 MYH10 Myosin-10 1 DHNIPQES(1)PKPVK;DHNIPQES(1)PKPVK 76.85 0.00040522 121336000.0 8930.7 7587.7 6023.700000000001 5037.0 10390.099999999999 7502.4 8209.5 7437.6 10178.599999999999 10681.0 11324.0 True False 10437.983825348172 7973.881520312936 6877.951237698069 6271.06522611952 8861.730053682246 8296.29898830993 9701.059884510772 8491.90257669472 7873.163351884189 8268.154681723334 8511.938273499301 1.2262757893634328 0.9367879869545662 0.8080358452682374 0.7367376295060294 1.0410942571414046 0.9746662536474527 1.1397004504501203 0.9976461651669914 0.9249554095564995 0.9713598026744446 1.0 13.055271973466493 DHNIPQES(ph)PKPVK ddPTM_A549_PD325901_60min_R1 2 DHNIPQESPKPVK 13 1 P35580-2;P35580-4 P35580-2 MYH10 Myosin-10 1 DHNIPQES(1)PKPVK;DHNIPQES(1)PKPVK 115.56 7.6843e-06 147997000.0 10120.8 8818.9 10075.1 8301.1 9311.099999999999 9236.3 9206.0 7587.299999999999 9693.0 10732.400000000001 13736.300000000001 True False 11148.256165460825 9562.09965293224 10758.856872498029 8813.840093834053 8657.120457551187 9161.082635085502 9556.339367716493 7435.965349378293 9285.636918315482 10054.754432397158 12046.822181580023 0.9254105354445147 0.7937445667250735 0.8930867170056404 0.7316319574560249 0.7186227477307835 0.760456367413897 0.7932664086574169 0.6172553423049708 0.7707955490962188 0.8346395655919284 1.0 13.556365009198995 -10.525231832407357 0.9247647393502848 0.9947986793348852 0.7761287027586011 0.18755196096988813 0.09121449072064454 0.34731664214383207 0.5500959404857261 0.04757393801538933 0.01482756804213068 2.983789405620094e-11 10.525231832407357 -0.21866997657628406 DHNVGS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 DHNVGSPPK 9 0 A0A0C4DGH6;A0JNW5;F8W665;A0JNW5-2 A0A0C4DGH6 UHRF1BP1L UHRF1-binding protein 1-like 1 DHNVGS(1)PPK;DHNVGS(1)PPK 58.172 0.0036728999999999998 23387000.0 1234.67 2253.23 2254.1000000000004 2297.1 2011.71 1798.61 1887.77 1802.9099999999999 3203.3 2623.3 2375.3 True False 1443.05211121666 2367.909782676532 2573.7652746476756 2859.8896031207382 1715.790123896122 1988.9377163793094 2230.7533733093246 2058.4780136803092 2477.757664618967 2030.6947080390246 1785.4474550550058 0.8082299521786838 1.326227650089866 1.4415239537633906 1.6017775236250966 0.9609860648871698 1.1139715765637217 1.2494085821420042 1.152919962921503 1.3877516572128035 1.137358986560858 1.0 10.802069961320857 -11.037250412491556 1.3325165385595892 0.999968325912202 1.2521388381848648 0.05372720776351092 0.21503124889769476 0.6694612754239796 2.118193432903651 0.15120987223395624 0.03387781029550981 9.178032421438343e-12 11.037250412491556 0.25217051227266285 DHPLPEVAHVK ddPTM_A549_MK2206_60min_R1 1 DHPLPEVAHVK 11 0 Q86WV2;H3BPG0;H3BN72;H3BNV9;P13073 Q86WV2 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial 0 57.348 0.013194999999999998 2744900.0 242.56 291.23 318.92 134.8 292.06 400.0 264.84 350.62 454.64 452.96 372.62 False True 283.49819797736495 306.05236305609554 364.1476515640997 167.82600605140195 249.09836088954256 442.32773450148943 312.9579998555128 400.32145872871666 351.66476591089435 350.63602140561744 280.08817021117176 1.012174836815215 1.0927000695007867 1.3001179281850836 0.5991899119654713 0.889356950355081 1.579244614893937 1.1173552942973597 1.42926942764807 1.2555502277934751 1.2518772968571157 1.0 8.129737240884081 DHS(ph)NNDREVPPDLTK ddPTM_A549_MK2206_60min_R1 1 DHSNNDREVPPDLTK 15 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 DHS(1)NNDREVPPDLTK 86.8 1.7329e-05 13140000.0 2667.6 2211.1 1668.4 1184.7 2421.2 2245.4 2227.0 2001.5 2774.7 2774.2 3161.9 True False 3117.8256634417007 2323.63554562831 1905.0042075427814 1474.9515531832035 2065.0446873442447 2483.006737624109 2631.6170732450805 2285.2187543366786 2146.234880285408 2147.506293234422 2376.7129659994207 1.3118225499016614 0.9776677196066916 0.8015289329402538 0.620584636968553 0.8688658314597456 1.0447230158396479 1.107250690719597 0.9615038866823078 0.9030265374863661 0.9035614834252331 1.0 11.214751965168503 -7.236656114151485 23.888280496254904 0.9721596967026248 0.8967327926164663 0.03378278824177561 0.16482411438820357 1327.5494938712006 1279607.6135096236 0.024918177425629642 0.04314448445148807 5.7988768507782365e-08 7.236656114151485 -0.07542690408615849 DHS(ph)NNDREVPPDLTK ddPTM_A549_PD325901_60min_R1 2 DHSNNDREVPPDLTK 15 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 DHS(1)NNDREVPPDLTK;DHS(1)NNDREVPPDLTK 84.581 6.9051e-05 26146000.0 6122.1 5900.7 6265.3 5827.0 7568.099999999999 5970.9 5369.7 4795.9 6796.5 6877.8 7165.799999999999 True False 6743.611085148183 6397.9726975084495 6690.500934309524 6186.92055592283 7036.54276452762 5922.274970045584 5574.046871912588 4700.24201218923 6510.866740465408 6443.534534227308 6284.452027748822 1.0730627038557947 1.0180637339991427 1.0646116645918857 0.9844805129555697 1.1196748313867244 0.9423693496101084 0.8869582976050323 0.7479159664892727 1.0360277573473167 1.0253136639083347 1.0 12.617571239122574 -7.282007192905943 24.665010707468888 0.9794813501826178 1.0470464715201668 0.2356566737199779 0.08543696187025893 1240.9179093292903 1488110.3056610827 0.014291998032396327 0.022863332981213368 5.2238753699986035e-08 7.282007192905943 0.067565121337549 DHS(ph)PTPS(ph)VFNSDEER ddPTM_A549_MK2206_60min_R1 2 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(0.783)PT(0.225)PS(0.99)VFNS(0.001)DEER;DHS(0.975)PT(0.029)PS(0.884)VFNS(0.112)DEER 64.2 0.001464 13256100.0 577.89 913.08 455.08 315.25 1352.94 834.28 601.62 647.1800000000001 1261.6599999999999 928.52 812.75 True False 675.4237039459899 959.5518719199935 519.6171869866752 392.4862641521102 1153.9243182287803 922.5629558497559 710.9265665045826 738.9197469056262 975.8960244570186 718.7666871148534 610.9217442411297 1.1055813781599522 1.5706624964084763 0.8505462309777981 0.6424493281699213 1.8888250894755 1.5101164176039248 1.1636949792770532 1.2095162005135243 1.597415763403953 1.1765282442314864 1.0 9.2548437802511 -6.740700620690542 24.99941893311513 1.3260245720044925 1.0663522965895944 0.18911309514964547 0.31261190701267205 441.12200071929385 531745.371466474 0.04965529603139199 0.10327648725154778 1.8167676133057795e-07 6.740700620690542 -0.2596722754148981 DHS(ph)PTPS(ph)VFNSDEER ddPTM_A549_PD325901_60min_R1 2 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(0.76)PT(0.247)PS(0.992)VFNS(0.001)DEER;DHS(0.981)PT(0.166)PS(0.801)VFNS(0.051)DEER 72.421 0.0003952 15521700.0 988.06 794.74 921.41 738.0699999999999 988.27 692.28 811.74 702.4 858.23 1119.65 1012.84 True False 1088.367123828672 861.7155289402725 983.9424234884422 783.658907621411 918.8573245464137 686.6423012047023 842.6312099011717 688.39008097786 822.1615776752194 1048.955107919336 888.2671009217562 1.225270104790858 0.9701085721243857 1.1077100823247912 0.8822334034528656 1.034438091417451 0.7730133205340741 0.9486236842800684 0.7749809491576537 0.9255792281646602 1.180900549880586 1.0 9.794849748369245 -2.0000021180020595 0.767406109767844 0.9380340430908862 56.13443437784154 0.3014391420967115 0.11779717151106493 282.0201664630241 1.0579357000260117 0.014256199110073666 26993.203640258256 0.009999951231319228 2.0000021180020595 55.196400334750656 DHS(ph)PTPSVFNR ddPTM_A549_MK2206_60min_R1 2 DHSPTPSVFNR 11 0 H0Y8P7 H0Y8P7 FIP1L1 1 DHS(0.979)PT(0.02)PSVFNR;DHS(0.999)PT(0.001)PSVFNR 92.295 9.0296e-05 12652800.0 1244.6 1354.9 1026.4 725.62 1659.9899999999998 1368.69 1186.12 1262.43 2151.3999999999996 1597.54 1791.94 True False 1454.6580524514686 1423.8586227541941 1171.9589538611308 903.3969325743199 1415.8076699754556 1513.5238673371084 1401.6226506140356 1441.3833185297296 1664.1113350798385 1236.654604460284 1346.9518429719485 1.0799629252088734 1.057096903785778 0.8700822972819066 0.6706972764379179 1.0511197392562914 1.1236659092411434 1.0405885391726106 1.0701075365466854 1.235464611272294 0.9181134506870698 1.0 10.395482556288204 -6.984092253109842 24.997631682752587 1.1045386303135816 0.9176571345612308 0.1944385204387552 0.1270305647104334 231.90915510675688 364422.8854555558 0.019053759059336397 0.03600052689146757 1.037308046778865e-07 6.984092253109842 -0.1868814957523508 DHS(ph)PTPSVFNS(ph)DEERYR ddPTM_A549_MK2206_60min_R1 3 DHSPTPSVFNSDEERYR 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(0.773)PT(0.205)PS(0.022)VFNS(1)DEERYR;DHS(0.83)PT(0.17)PS(0.014)VFNS(0.986)DEERYR;DHS(0.979)PT(0.021)PSVFNS(1)DEERYR 109.22 2.0904e-09 48099000.0 1665.3200000000002 1659.8200000000002 1473.27 725.88 2201.7300000000005 1727.27 1939.25 1290.73 2626.55 2792.83 2729.67 True False 1946.3853028350318 1744.297748335571 1682.201839394962 903.7206325859916 1877.8584336140957 1910.0485649309674 2291.586622941411 1473.6949301948437 2031.6406187384723 2161.927763295327 2051.817603940554 0.9486151688614829 0.8501232005152967 0.8198593462519583 0.44044881516289713 0.9152170397639798 0.9309056327729539 1.1168568875422338 0.7182387593149533 0.9901662871186351 1.0536646918046246 1.0 11.002686773118713 -6.98402777212249 24.998485755841003 0.9760443319349817 0.7626742467931948 0.28987593409153034 0.14907238192096323 219.1910149588842 343058.76893920585 0.020546186650283557 0.03882096626936238 1.0374620704091597e-07 6.98402777212249 -0.2133700851417869 DHS(ph)PTPSVFNS(ph)DEERYR ddPTM_A549_PD325901_60min_R1 2 DHSPTPSVFNSDEERYR 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(0.994)PT(0.006)PSVFNS(1)DEERYR;DHS(0.949)PT(0.05)PS(0.001)VFNS(1)DEERYR 183.07 1.0092e-39 50512000.0 3317.1000000000004 3046.5 2641.7 2767.2 3838.0 3197.2 2720.0 965.11 3128.7 3588.9 3537.0 True False 3653.849550080043 3303.239246692679 2820.981647832582 2938.123659232822 3568.4321203812096 3171.163063228283 2823.511088441113 945.8601239358511 2997.2116193473275 3362.2962415144925 3101.971422890337 1.1779120604133355 1.064883842035787 0.9094157434900105 0.94717947352821 1.1503755624725376 1.0223056988298993 0.9102311735065044 0.3049222558776905 0.9662279920537123 1.0839223781054668 1.0 11.598969680177193 -7.723641732744676 6.219680078984535 0.9168598220379625 1.0411337536260092 0.1464764488915622 0.2065609239258712 0.43027802476599725 44.319212567115386 0.03314799311779178 0.04884540882640173 1.889549472860006e-08 7.723641732744676 0.12427393158804678 DHS(ph)PTPSVFNSDEER ddPTM_A549_MK2206_60min_R1 3 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DHS(0.872)PT(0.125)PS(0.003)VFNSDEER;DHS(0.848)PT(0.152)PSVFNSDEER;DHS(0.567)PT(0.432)PSVFNSDEER 84.94 4.4203000000000004e-05 552245600.0 1439.54 1195.75 1208.0900000000001 1258.85 1528.79 1408.24 1286.04 1455.9299999999998 2141.99 1511.5 2172.06 True False 1682.4991586260549 1256.6085675388056 1379.415327913186 1567.2683065119238 1303.9070161758666 1557.2590220859424 1519.696821228605 1662.3125360986253 1656.8326850551557 1170.0511002176593 1632.6775561936506 1.0305152736640515 0.7696612002607576 0.8448792124815456 0.9599374356353505 0.7986310654111859 0.9538068409027833 0.9308003380481056 1.01815115286699 1.014794794458876 0.7166455469293413 1.0 10.673024180268824 -7.851140060195442 1.6108219889268418 1.007949658920247 0.8781910699555185 0.0 0.11210190348300769 0.24686191607691813 1.30403343931135 0.010591676363959683 0.015967177177436363 1.4088343753339434e-08 7.851140060195442 -0.12975858896472847 DHS(ph)PTPSVFNSDEER ddPTM_A549_PD325901_60min_R1 4 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DHS(0.761)PT(0.239)PSVFNSDEER;DHS(0.944)PT(0.056)PSVFNSDEER;DHS(0.938)PT(0.062)PSVFNSDEER;DHS(0.793)PT(0.207)PSVFNSDEER 105.89 1.5169e-06 537850000.0 6319.5 7073.52 6160.03 6209.32 7082.83 6024.48 6538.039999999999 5636.62 6247.52 7344.2 7400.27 True False 6961.050987829987 7669.6303549206 6578.086679069588 6592.855594011113 6585.356455237008 5975.418632289976 6786.848689952764 5524.193192257154 5984.95846073603 6880.485958630989 6490.083704176617 1.0725672125538666 1.181745984259787 1.0135596055311795 1.015835217929217 1.0146797414953337 0.920699779025125 1.045725910373878 0.8511744137756073 0.9221696874085739 1.0601536547522699 1.0 12.664021369792783 -6.194234537257656 1.042854288367182 0.957823320097385 1.1330867624687024 0.40073707938245784 0.0653009978284018 0.39398969421209945 0.6988417292293312 0.00889606611149524 0.05273540251391899 6.393894450780108e-07 6.194234537257656 0.1752634423713174 DHSPT(ph)PS(ph)VFNSDEER ddPTM_A549_MK2206_60min_R1 1 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(0.396)PT(0.625)PS(0.978)VFNSDEER 73.809 0.0010921 10768000.0 546.58 880.8 618.6 522.09 1039.1 835.35 658.92 747.73 1094.1 762.03 1087.7 True False 638.8293414019956 925.6289577990206 706.3267818184873 650.0020734375105 886.2497664874465 923.7461825395477 778.6372348013692 853.7230173270865 846.2880969186812 589.8868937471805 817.5940710071695 0.7813527079704002 1.1321375614414206 0.8639088844521398 0.7950180859760791 1.0839728392302332 1.1298347374285782 0.9523518606760314 1.0441893448119197 1.0350956873698514 0.7214911588345015 1.0 9.675240924015561 -6.7791900623043055 24.992205825853112 1.026714318861362 0.9080926804122684 0.08786985960588123 0.13303787668123362 239.20029590702606 336783.4528036411 0.01311617235439994 0.024825529194721266 1.662684842661204e-07 6.7791900623043055 -0.11862163844909368 DHSPT(ph)PS(ph)VFNSDEER ddPTM_A549_PD325901_60min_R1 1 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(0.394)PT(0.613)PS(0.951)VFNS(0.042)DEER 58.693000000000005 0.011502 9950400.0 222.09 317.88 354.94 317.28 263.21 265.88 314.05 197.16 550.87 476.65 339.89 True False 244.6364133059832 344.6688631999572 379.0283628276098 336.8776650048388 244.72303762520534 263.71476143223305 326.0013446047542 193.22748913097206 527.7188496020276 446.5542376544021 298.08568474023093 0.8206915857739814 1.1562744567902397 1.271541648026194 1.13013701177369 0.8209821878513593 0.8846944852854953 1.0936497835810217 0.6482280063175849 1.7703595865796515 1.4980734081328166 1.0 8.219583282815384 -8.755716707115194 24.99991265219006 1.3637809123474318 0.9945292782336489 0.39575060101710025 0.24104242218527197 155.3041322561464 678456.4810584908 0.053663461971749996 0.060040661603213884 1.7550249417918534e-09 8.755716707115194 -0.3692516341137829 DHT(ph)VSGDEDYCPR ddPTM_A549_MK2206_60min_R1 1 DHTVSGDEDYCPR 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 DHT(0.5)VS(0.5)GDEDYCPR 197.38 2.3354e-30 7438000.0 1885.3 1593.2 1673.1 879.09 2426.7 2339.3 1641.8 1795.9 2637.0 2648.6 3137.0 True False 2203.4925488403937 1674.287074892598 1910.3707382161526 1094.4670894638493 2069.7356446300523 2586.843173298335 1940.0938081965746 2050.474324713084 2039.723710423694 2050.2794204674115 2357.996323204459 0.934476668668381 0.7100465163649123 0.8101669707525269 0.46415131299971474 0.8777518540899727 1.0970514024308906 0.8227721939617085 0.8695833426604076 0.8650241267771613 0.8695006859387857 1.0 11.203345753404347 -6.982182145943101 24.99384571906746 0.932116296584344 0.7261650380248207 0.3332154632146589 0.12629742039666356 194.99850162267953 273531.06263983884 0.01762065440493288 0.03329548191650496 1.0418803663135711e-07 6.982182145943101 -0.20595125855952334 DHTVS(ph)GDEDYCPR ddPTM_A549_MK2206_60min_R1 3 DHTVSGDEDYCPR 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 DHT(0.085)VS(0.915)GDEDYCPR;DHT(0.019)VS(0.981)GDEDYCPR;DHT(0.035)VS(0.965)GDEDYCPR 208.51 2.7561e-37 34599400.0 4249.3 5000.139999999999 4019.66 2361.2599999999998 5959.6 4537.709999999999 4517.43 3724.26 6413.6 6779.0 6909.4 True False 4966.477954589447 5254.625768675289 4589.70823117443 2939.76880600099 5082.95073463438 5017.887460311882 5338.188556438941 4252.1852600679085 4960.929840414638 5247.619191780024 5193.6052902610445 0.9562678865686034 1.0117491559338692 0.8837229582658059 0.5660362391253705 0.9786940767651015 0.9661665028186364 1.0278387089694738 0.8187347752516985 0.9551996278418163 1.0104000782693798 1.0 12.34252065920572 DHTVS(ph)GDEDYCPR ddPTM_A549_PD325901_60min_R1 4 DHTVSGDEDYCPR 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 DHT(0.015)VS(0.985)GDEDYCPR;DHT(0.07)VS(0.93)GDEDYCPR;DHTVS(1)GDEDYCPR;DHT(0.023)VS(0.977)GDEDYCPR 246.3 3.1174e-57 58613300.0 8238.7 7853.650000000001 7680.4 7395.3 7873.300000000001 7417.57 6798.26 5028.76 6093.0199999999995 8476.7 9214.7 True False 9075.086758989615 8515.50464788707 8201.638129997102 7852.090885055106 7320.306569410467 7357.1637692074955 7056.971504450612 4928.457436814096 5836.95155844781 7941.479715357327 8081.350316796044 1.122966633450875 1.0537229935681283 1.0148846181004003 0.9716310489270027 0.9058271554193306 0.9103879278586129 0.8732416276749699 0.6098556854503551 0.7222742895226877 0.9826921744565368 1.0 12.98038065840427 -6.425391541001858 0.9501384124254636 0.8460882670117676 1.1028622461640336 0.45666224755801144 0.10392008064883734 0.5839465024306177 0.9049974232971799 0.020633119795476065 0.10079168259588511 3.754987183385671e-07 6.425391541001858 0.25677397915226596 DHYQDPVPGIT(ph)PSSSSR ddPTM_A549_MK2206_60min_R1 2 DHYQDPVPGITPSSSSR 17 0 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 DHYQDPVPGIT(0.532)PS(0.117)S(0.117)S(0.117)S(0.117)R;DHYQDPVPGIT(0.525)PS(0.119)S(0.119)S(0.119)S(0.119)R 58.107 0.0059573000000000004 22184000.0 2069.9700000000003 2207.5 1742.0700000000002 1177.82 2660.3 2327.27 2335.9 2051.5 2361.5 2521.2 2657.1000000000004 True False 2419.3303300923735 2319.8523210051544 1989.1217213102689 1466.3859528743483 2268.9733940780993 2573.5401666832026 2760.3027936206486 2342.3064074552562 1826.624020540597 1951.6591689505547 1997.2687377706627 1.2113193804819742 1.161512357918623 0.995920921252947 0.7341956168157511 1.1360381060240854 1.288529739646238 1.38203875193164 1.1727547541097159 0.9145609631778755 0.9771640300788881 1.0 10.963812748923386 -8.76066218415648 24.999950364113154 0.9596537835082144 1.1315054859863964 0.18768590610354052 0.15857959784340694 27.695370887238145 890872.9539022502 0.02992036133436603 0.03296123499842072 1.735153161373052e-09 8.76066218415648 0.17185170247818204 DHYQDPVPGIT(ph)PSSSSR ddPTM_A549_PD325901_60min_R1 2 DHYQDPVPGITPSSSSR 17 0 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 DHYQDPVPGIT(0.566)PS(0.107)S(0.089)S(0.107)S(0.13)R;DHYQDPVPGIT(0.728)PS(0.058)S(0.058)S(0.07)S(0.086)R 63.93600000000001 0.0024949 33240000.0 4816.700000000001 5671.9 4827.5 5462.1 6782.3 4876.7 4742.1 5107.6 4384.5 5627.299999999999 6492.8 True False 5305.687838132871 6149.890918534782 5155.123180115752 5799.481511670854 6305.934645664788 4836.985772064734 4922.563210476686 5005.724911165316 4200.234712509466 5271.991317638975 5694.226761250318 0.9317661660821998 1.0800221305525266 0.9053245324188333 1.0184844676606142 1.1074259789893146 0.8494543640202074 0.8644831716178102 0.8790877358853508 0.7376303910291049 0.9258485021206583 1.0 12.47528423134557 -7.2843620594664795 24.878913181270946 0.8708331989609419 1.007383392761118 0.40689837240019333 0.07952207990526526 733.1141291212028 795676.6802907423 0.015604079925816298 0.024955612971850963 5.195626707024059e-08 7.2843620594664795 0.13655019380017608 DIAAHIK ddPTM_A549_PD325901_60min_R1 1 DIAAHIK 7 0 F8VXL2;F8VRV5;P63167 F8VXL2 DYNLL1 Dynein light chain 1, cytoplasmic 0 81.297 0.016638 9244600.0 1536.1 1410.4 2222.3 1614.1 2011.1 1449.7 1936.4 1667.6 1924.4 2010.4 1923.2 False True 1692.0437411829478 1529.259357799231 2373.1186417755016 1713.7992911129297 1869.8472739183542 1437.8941238465036 2010.0907616387371 1634.3384097931082 1843.5241602812669 1883.4630009029897 1686.6585921692667 1.003192791379763 0.9066798490810168 1.4069940726554246 1.016091400517965 1.1086104103104129 0.852510478719455 1.191759121241895 0.9689799805253606 1.0930037464844917 1.1166830143619086 1.0 10.719952262300097 DIDEVS(ph)SLLR ddPTM_A549_PD325901_60min_R1 1 DIDEVSSLLR 10 0 P50990-2;P50990;P50990-3;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 1 DIDEVS(0.5)S(0.5)LLR 48.56100000000001 0.03092 930350.0 412.72 393.55 315.31 300.16 484.43 220.34 347.79 498.5 482.55 579.19 466.2 True False 454.6190305715943 426.71583966384503 336.7088327130603 318.70020148717987 450.4053079927747 218.54562409349418 361.02533876799066 488.5570264343153 462.27010161282726 542.6198445548159 408.8603554852913 1.1119176131224324 1.0436713512058668 0.8235301569246261 0.7794842351709619 1.1016115941546158 0.5345238812261326 0.8830040230715852 1.1949239388945625 1.1306307775038302 1.3271520148016323 1.0 8.675464370717778 -8.234059915742986 23.326147061610037 1.0734031441047622 0.8890787926822852 0.29793160437175237 0.17801907507869005 367.16461741136345 312808.6258412174 0.02590885200296255 0.03344204183350528 5.833646170995102e-09 8.234059915742986 -0.18432435142247705 DIDEVSSLLR ddPTM_A549_MK2206_60min_R1 2 DIDEVSSLLR 10 0 P50990-2;P50990;P50990-3;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 130.75 3.2958e-06 6638800.0 622.89 925.05 994.26 845.0899999999999 938.74 651.82 886.56 747.5799999999999 1168.33 1144.49 1225.21 False True 728.0186038016192 972.131093791989 1135.2610185755734 1052.137087937532 800.6525895413586 720.7951597569016 1047.6364761814816 853.5517543677313 903.7051204396339 885.9489141171745 920.9565429242389 0.7905026674657205 1.0555667379323455 1.232697706854735 1.142439451699606 0.8693706513003437 0.7826592528114508 1.137552563397841 0.9268100226070575 0.9812679299396387 0.9619877516740285 1.0 9.846989271404183 -6.749757202459488 24.997022147916525 0.9742119572263571 1.0679916970416279 0.11020179643059536 0.13048879986890635 412.564509326034 882782.3980123552 0.018257699868230674 0.03776326276392681 1.7792738564305235e-07 6.749757202459488 0.09377973981527077 DIDEVSSLLR ddPTM_A549_PD325901_60min_R1 2 DIDEVSSLLR 10 0 P50990-2;P50990;P50990-3;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 120.12 0.00014834 7702600.0 1415.0700000000002 1329.96 1429.8899999999999 1442.58 1545.47 1438.0 1301.3899999999999 1282.38 1654.77 1761.88 1778.91 False True 1558.726864680524 1442.0403966950257 1526.9309340270759 1531.6848902631116 1436.9215187820591 1426.28940476738 1350.9151085979322 1256.801924892352 1585.2257715176834 1650.6345961156785 1560.1153474395962 0.9991100127555625 0.9243165250964611 0.9787295128741722 0.9817766954070777 0.9210354357069057 0.9142204819074138 0.8659071977049673 0.8055826942251219 1.0160952355986352 1.058020869306003 1.0 10.607436983638785 DIDIHEVR ddPTM_A549_MK2206_60min_R1 1 DIDIHEVR 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 89.355 0.0028618000000000003 7091300.0 326.38 519.89 350.85 266.59 561.37 492.03 558.96 318.3 568.36 706.85 480.31 False True 381.46496477511704 546.350180370269 400.60580569191114 331.9045619676799 478.7932166423423 544.0962880169191 660.5157967045668 363.4199997528675 439.62736748441824 547.1720940713548 361.0357711183726 1.056584957200948 1.5132854527900432 1.109601423844965 0.9193121250549395 1.3261655906260896 1.5070426022648222 1.8295023638751957 1.0066038570834943 1.2176836830394788 1.5155619964647595 1.0 8.495997974971434 -9.833195369955197 0.8042475506891524 1.0251184290173982 1.291786254461197 0.0 0.29085032511624526 0.823770416031993 1.1059118913108983 0.10368751792412499 0.05406426169345688 1.4682656210342574e-10 9.833195369955197 0.26666782544379886 DIDIS(ph)SPEFK ddPTM_A549_MK2206_60min_R1 1 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DIDIS(0.761)S(0.239)PEFK 221.09 3.3896e-28 392190000.0 21229.0 22295.0 22412.0 21302.0 30451.0 23942.0 20793.0 24848.0 32067.0 26105.0 28286.0 True False 24811.93620078118 23429.720270355563 25590.358606718295 26520.9909562831 25971.698238195775 26475.526548586633 24570.81895104848 28370.280093808535 24803.87570047651 20207.8623692901 21261.805546114556 1.1669722097197612 1.1019628704410374 1.2035835127555643 1.2473536595357315 1.2215189430580564 1.2452153459481172 1.1556318158284833 1.3343307101683564 1.1665931026732226 0.9504302127804448 1.0 14.37597649484842 -10.123651395237639 0.828351301188875 1.010567491295359 1.206311041596076 0.6619249828011058 0.06169965563272161 0.27895113722082 0.3791458963406026 0.028646209560277 0.012057794064019977 7.522264580049537e-11 10.123651395237639 0.195743550300717 DIDISS(ph)PEFK ddPTM_A549_MK2206_60min_R1 1 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DIDIS(0.243)S(0.757)PEFK 193.22 5.5055e-15 362430000.0 25000.0 27720.0 27349.0 22457.0 37231.0 27991.0 26499.0 29965.0 38285.0 32505.0 33885.0 True False 29219.388808682903 29130.82959830706 31227.499443830926 27958.966008133048 31754.36921960748 30952.989041077963 31313.52529138816 34212.63051396381 29613.508628582123 25162.097924297053 25470.419321575766 1.1471891545943815 1.1437122110365334 1.2260300488016853 1.0977034046883263 1.2467156044309264 1.215252432646759 1.2294075294183615 1.3432299673599248 1.1626627836274679 0.9878949226007624 1.0 14.636535090562349 -10.086783478778901 0.9178574966051619 1.0150751190007046 1.2020738461023208 0.6047827393959091 0.06363784465118978 0.2763207104750574 0.4663894580553166 0.02724126883542706 0.012768456954498596 8.188729424773063e-11 10.086783478778901 0.18699872710161625 DIDISS(ph)PEFK ddPTM_A549_PD325901_60min_R1 4 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DIDIS(0.045)S(0.955)PEFK;DIDIS(0.14)S(0.86)PEFK;DIDIS(0.057)S(0.943)PEFK;DIDIS(0.124)S(0.876)PEFK 237.68 1.8887999999999998e-45 1199320000.0 103234.0 101722.0 106331.0 97678.0 122713.0 99233.0 105307.0 105853.0 98836.0 100199.0 108088.0 True False 113714.23968314611 110294.46993339011 113547.26108024585 103711.34821716673 114094.06221686785 98424.87934859638 109314.51551120143 103741.67887492817 94682.26663144834 93872.41803993168 94793.86122628518 1.199594976004781 1.163519119345745 1.197833484271665 1.0940724101278494 1.2036018022782151 1.0383043593260062 1.1531813779613174 1.0943923744944137 0.9988227655948052 0.9902795057144692 1.0 16.53250601393506 -8.139788986807135 0.6299742296003602 0.9924878285782184 1.1759071620660089 0.6940169620661243 0.04510322817240461 0.2499874720878361 0.20628986652975595 0.010747203857510138 0.01619742887543061 7.247880315246293e-09 8.139788986807135 0.1834193334877905 DIDISSPEFK ddPTM_A549_MK2206_60min_R1 1 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 98.044 0.0013925 1486700.0 1001.1 1665.1 1588.1 1176.0 1905.2 1188.0 1392.6 1956.4 2033.0 2030.1 2061.7 False True 1170.0612054548978 1749.8464777828672 1813.3164600807315 1464.1200527926453 1624.9476038031783 1313.7133714694237 1645.617393893624 2233.7256912237212 1572.5287460338895 1571.499000034316 1549.7229899746997 0.7550131301039806 1.1291350061286982 1.170090701248702 0.9447624267460523 1.0485406839255231 0.8477085130490779 1.061878416039043 1.4413709454359895 1.0147160209964765 1.0140515499869895 1.0 10.597794644222773 -7.896391368779466 17.186092203960115 1.0503865472354552 0.9953389818850771 0.07940980351846416 0.16279740355360345 5.595101027745896 903.1213360130647 0.0260405792726734 0.035980641106401465 1.2694296305075778e-08 7.896391368779466 -0.055047565350378136 DIDNNLITST(ph)PR ddPTM_A549_PD325901_60min_R1 2 DIDNNLITSTPR 12 0 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 DIDNNLIT(0.001)S(0.082)T(0.917)PR;DIDNNLIT(0.008)S(0.053)T(0.938)PR 127.78 9.7056e-08 43513000.0 8128.7 10639.7 8480.1 9116.7 9564.599999999999 8519.2 8241.0 9358.900000000001 8913.6 8878.7 10776.1 True False 8953.919639967338 11536.344859030405 9055.610580983861 9679.81785347205 8892.815492078707 8449.822459731753 8554.615764648232 9172.229397584984 8538.992389878971 8318.097366751577 9450.708015326149 0.9474337399321646 1.2206857772266366 0.9581938798975103 1.0242426110059009 0.9409681769511119 0.8940941193007692 0.9051825271477301 0.9705335708933598 0.9035293838336076 0.8801560002977741 1.0 13.206206699915072 -6.19546425472205 1.8559014262923936 0.9470199874632744 1.0771517672381816 0.3079469256006402 0.07548748980501654 0.307025180514525 2.0007997524275587 0.010080627343257759 0.03656990771116231 6.375815560098509e-07 6.19546425472205 0.1301317797749072 DIDTAAK ddPTM_A549_MK2206_60min_R1 2 DIDTAAK 7 0 I3L0Y5;D6R9H7;E7EQ97;E7EPU7;P05496;Q06055;P48201;Q06055-3;Q06055-2 I3L0Y5 ATP5G1;ATP5G2;ATP5G3 ATP synthase F(0) complex subunit C1, mitochondrial;ATP synthase F(0) complex subunit C2, mitochondrial;ATP synthase F(0) complex subunit C3, mitochondrial 0 ; 114.78 0.020327 23791000.0 12077.0 12934.3 12136.4 10737.599999999999 13296.400000000001 10315.8 11706.6 10608.2 16532.3 16807.9 16055.0 False True 14115.30234569854 13592.60062313791 13857.524013679104 13368.31248202918 11340.517173634571 11407.411108926162 13833.537687315156 12111.944836249988 12787.760446658176 13010.983716406483 12068.100404541794 1.1696374634392575 1.1263247874555613 1.1482771562344531 1.1077395807046861 0.9397102106779457 0.9452532483598676 1.146289575292972 1.0036330847638368 1.059633249475248 1.0781302177026832 1.0 13.558910984173878 -6.555918857957893 11.287260466458225 1.0244368677537805 1.1429389782687007 0.4953732754781366 0.05597563621354686 0.3825234438839903 129.3756143513896 0.007725868112308609 0.016108498954941475 2.780232668056462e-07 6.555918857957893 0.11850211051492021 DIDTAAK ddPTM_A549_PD325901_60min_R1 4 DIDTAAK 7 0 I3L0Y5;D6R9H7;E7EQ97;E7EPU7;P05496;Q06055;P48201;Q06055-3;Q06055-2 I3L0Y5 ATP5G1;ATP5G2;ATP5G3 ATP synthase F(0) complex subunit C1, mitochondrial;ATP synthase F(0) complex subunit C2, mitochondrial;ATP synthase F(0) complex subunit C3, mitochondrial 0 ;;; 117.16 0.019502000000000002 52918400.0 27012.8 24928.0 25483.699999999997 25390.5 29332.100000000002 27509.0 26189.5 26239.9 27978.600000000002 27873.700000000004 29568.800000000003 False True 29755.119570227685 27028.770044823606 27213.17712793699 26958.813518990657 27271.914486251608 27284.975824579866 27186.155753944287 25716.524609696662 26802.75674020236 26113.749825044608 25932.02505206668 1.1474275345054983 1.0422930716191607 1.0494042433361064 1.0395953831165277 1.0516692942990251 1.0521729702866132 1.0483622354736872 0.9916897950724121 1.0335774659475074 1.0070077355167233 1.0 14.66244725132102 -2.0000000000000004 0.3477651566864829 1.01516195784879 2.1868603334362913 0.6688997248067158 0.022623126031991538 24.638144617019964 0.3033182599451854 0.006109599382045372 19.182181355817008 0.00999999999999999 2.0000000000000004 1.1716983755875012 DIEIS(ph)T(ph)EEEKDTGDLKDSSLLK ddPTM_A549_PD325901_60min_R1 2 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 2 DIEIS(0.999)T(0.997)EEEKDT(0.004)GDLKDSSLLK;DIEIS(0.999)T(0.998)EEEKDT(0.002)GDLKDSSLLK 90.97399999999999 8.315000000000001e-07 19221000.0 5117.4 4817.5 5145.5 5718.200000000001 6905.7 5980.9 5683.5 6912.099999999999 5390.4 6286.8 6612.3 True False 5636.914680769231 5223.487632017719 5494.704572405097 6071.400227025555 6420.667455371678 5932.193533361078 5899.788702630538 6774.23274306245 5163.860233620944 5889.850375087997 5799.029018823233 0.9720445720261461 0.9007521112694301 0.9475214824015674 1.046968416146604 1.1071969866904703 1.0229632433473954 1.0173752680802677 1.168166726028405 0.8904698039722553 1.015661476424754 1.0 12.501595642316358 -4.07304249917269 15.974877675447996 0.9821818694522009 0.9998105887712274 0.0 0.08262870091906246 0.0 0.0 0.011937839562263611 0.0 8.451961319427426e-05 4.07304249917269 0.017628719319026542 DIEIS(ph)TEEEKDTGDLK ddPTM_A549_MK2206_60min_R1 2 DIEISTEEEKDTGDLK 16 1 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.973)T(0.027)EEEKDTGDLK;DIEIS(0.976)T(0.024)EEEKDTGDLK 127.5 1.6548e-10 11721000.0 3559.6 4826.200000000001 3652.2000000000003 4130.6 5477.0 4732.700000000001 4555.200000000001 5361.799999999999 6437.1 5625.2 5782.5 True False 4160.373456135504 5071.8329656331025 4170.136877719821 5142.5971854296795 4671.34055533803 5233.511172687998 5382.820876536143 6121.851569823834 4979.107127936427 4354.463413128928 4346.5456611188365 0.9571677788528258 1.1668652215027164 0.9594140273327748 1.1831457866488702 1.0747248319796987 1.2040621635482482 1.23841351183472 1.4084406439314892 1.1455319962415311 1.001821619425494 1.0 12.085653585084298 -6.271161778450086 24.72897608365967 1.122706745953491 1.0417206267465071 0.13634036982306375 0.12335523411753577 1334.3231361577755 3393861.04880859 0.01932259499272698 0.04547120854458932 5.355971057947751e-07 6.271161778450086 -0.08098611920698384 DIEIS(ph)TEEEKDTGDLK ddPTM_A549_PD325901_60min_R1 2 DIEISTEEEKDTGDLK 16 1 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.806)T(0.194)EEEKDTGDLK;DIEIS(0.841)T(0.159)EEEKDTGDLK 196.55 9.5371e-40 54848000.0 23074.0 24403.0 23234.0 24727.0 28317.0 25593.0 23402.0 25321.0 23434.0 25860.0 24942.0 True False 25416.45549381898 26459.52645233595 24810.798957391908 26254.33063090851 26328.111608346717 25384.57909333212 24292.575916065765 24815.952791059764 22449.15047393017 24227.19518670479 21874.29212036494 1.1619327086775206 1.2096174955852474 1.1342446567353413 1.200236811616215 1.2036097654486053 1.1604754546410718 1.1105536939158551 1.1344802681845938 1.026280089449388 1.107564763851229 1.0 14.416948709821803 -8.530170881478623 0.9867846348157259 1.0058460499890411 1.1811595015663352 0.6173037134017522 0.04051598107220869 0.10036650616694769 0.19190431986354387 0.005383989074580015 0.006292101796909912 2.950048245314377e-09 8.530170881478623 0.17531345157729405 DIEIS(ph)TEEEKDTGDLKDSSLLK ddPTM_A549_MK2206_60min_R1 3 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.849)T(0.151)EEEKDTGDLKDSSLLK;DIEIS(0.548)T(0.452)EEEKDTGDLKDSSLLK;DIEIS(0.5)T(0.5)EEEKDTGDLKDSSLLK 143.05 1.7457e-27 45545000.0 6963.199999999999 7646.4 7139.599999999999 6542.0 10455.900000000001 6753.299999999999 5696.1 6373.6 11188.900000000001 10272.4 10156.900000000001 True False 8138.41792610483 8035.56909958496 8152.102637360614 8144.79029368154 8917.85096084698 7467.92972352227 6731.007638487342 7277.077318331373 8654.632015001765 7951.857705508358 7634.661413820653 1.065982822941205 1.0525115213411511 1.0677752680168975 1.0668174857024342 1.168074191830358 0.9781612200907094 0.8816380024793934 0.9531630708806598 1.1335973589260566 1.0415468708426938 1.0 12.898348461666753 -7.2898146005295335 24.95410530826759 1.0349675143256296 1.080588279562157 0.18356567736964868 0.06969540707923833 1740.9590818934646 1531052.4442933649 0.013003069452641172 0.02078927206972469 5.1308037025875335e-08 7.2898146005295335 0.04562076523652747 DIEIS(ph)TEEEKDTGDLKDSSLLK ddPTM_A549_PD325901_60min_R1 2 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.5)T(0.5)EEEKDTGDLKDSSLLK;DIEIS(0.833)T(0.167)EEEKDTGDLKDSSLLK 167.0 1.1694e-34 64567000.0 4565.299999999999 4588.6 5558.1 5735.9 5573.6 4957.9 5666.3 6131.1 5744.7 5709.4 5695.3 True False 5028.765895203769 4975.297425693104 5935.306089570456 6090.193515825939 5182.129563876161 4917.524506186506 5881.934147218333 6008.8104007451 5503.270236732381 5348.907509627704 4994.814205481296 1.0067973879158938 0.9960925914387817 1.1882936672713604 1.2193033144541345 1.0375019671781396 0.9845260111557358 1.1776081962695457 1.2030097924665641 1.1017967856928705 1.0708921872925377 1.0 12.286215299052955 -10.445713713631179 0.9839967274276125 1.0049823355337104 1.1028854957503764 0.06292132307046527 0.08512054228811038 0.7344879830156362 1.3604239422748428 0.044313278764734086 0.01588129482986457 3.583325716387057e-11 10.445713713631179 0.09790316021666601 DIEIST(ph)EEEKDTGDLK ddPTM_A549_MK2206_60min_R1 2 DIEISTEEEKDTGDLK 16 1 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.109)T(0.891)EEEKDTGDLK;DIEIS(0.131)T(0.869)EEEKDTGDLK 160.13 8.350600000000001e-21 17509800.0 6533.0 8371.7 7439.799999999999 6945.5 9198.400000000001 7500.3 6936.1 7944.9 9921.0 10204.2 9738.5 True False 7635.610683485012 8797.783771578184 8494.875511434184 8647.147811795345 7845.3275450468045 8293.976767703794 8196.299587667356 9071.113905235803 7673.909340581521 7899.0641328753145 7320.1616810732 1.043093174188683 1.201856482804947 1.1604764869331083 1.181278254297738 1.0717423858726314 1.133031909547635 1.1196883272208964 1.239195840262629 1.0483251156081648 1.0790832876408876 1.0 12.83765979845918 -8.93962395279207 8.518679961573913 1.021184065146622 1.1441667195327236 0.3903493702237396 0.05559324950081009 0.15090332524142186 19.25784037166406 0.008891131058345905 0.00941932999273397 1.149148216090896e-09 8.93962395279207 0.12298265438610168 DIEIST(ph)EEEKDTGDLKDSSLLK ddPTM_A549_MK2206_60min_R1 1 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.479)T(0.521)EEEKDTGDLKDSSLLK 123.14 7.703299999999999e-16 8729600.0 2365.5 2491.4 2516.1 1900.7 3229.9 2692.1 2148.0 2582.0 3937.2 3586.1 3570.2 True False 2764.738569077576 2618.201618370211 2872.920814312152 2366.371585325664 2754.7859886226593 2976.9762351286477 2538.2637958376445 2948.0064070433687 3045.430486416444 2775.997519345382 2683.6208074926876 1.0302269833943778 0.9756227895759989 1.0705390293185004 0.8817831411646304 1.0265183445184498 1.1093132930020924 0.9458354879164727 1.098518240286599 1.1348214613307444 1.0344224160115236 1.0 11.389965119464925 -6.998858778118328 24.999943123154164 1.0613594569994154 0.9893112004525534 0.16945489836046734 0.0653209585041229 52.7255929841723 1154961.7852164658 0.010272553799538923 0.01930235264451548 1.002631216081296e-07 6.998858778118328 -0.07204825654686198 DIEISTEEEKDTGDLKDS(ph)SLLK ddPTM_A549_MK2206_60min_R1 1 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEISTEEEKDTGDLKDS(0.565)S(0.435)LLK 104.3 1.3045e-10 8771900.0 2266.7 2415.3 2421.1 1906.4 3429.3 2498.7 2444.3 2528.8 3208.0 3526.2 3314.7 True False 2649.2635445056603 2538.2284534195915 2764.448385807858 2373.468085581548 2924.8545127662414 2763.1107754971767 2888.3976704683214 2887.2651441252015 2481.3931221233242 2729.628970947739 2491.5685089339586 1.0632914708169807 1.018727136869135 1.1095213219686475 0.9525999694855106 1.1739008990837134 1.1089844672500697 1.159268814046839 1.1588142705177091 0.9959160718342086 1.0955464243347806 1.0 11.282838528015434 -8.791102253352458 24.795583700646606 0.9980714454741801 1.0919442543790627 0.09502483885304147 0.0683764374233777 159.53495877373865 133356.59910440363 0.010717006423775365 0.011409978371043837 1.617699110325369e-09 8.791102253352458 0.09387280890488259 DIEISTEEEKDTGDLKDSS(ph)LLK ddPTM_A549_MK2206_60min_R1 1 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEISTEEEKDT(0.001)GDLKDS(0.157)S(0.842)LLK 131.57 1.7913e-22 10844000.0 2715.1 3038.7 3202.2 3145.1 4876.8 3555.2 3254.3 3461.0 5135.2 4409.1 4680.4 True False 3173.3425021781973 3193.3568506629044 3656.3201111205326 3915.6496411889048 4159.429180257896 3931.408904249238 3845.564185658495 3951.60734886797 3972.085399229332 3413.0812477470613 3518.12750753145 0.9019975812089946 0.9076865019322662 1.039280157780878 1.1129925316255471 1.1822849431561466 1.1174719778726192 1.0930712935861713 1.123213226470202 1.1290339507951515 0.970141429052952 1.0 11.780592056030724 -5.831997557761561 3.4063273136968544 1.0842360582520234 0.900169465107154 0.6090225210289215 0.056735987109603286 0.12842586340403256 2.9303362729158327 0.008730076097830938 0.03339380258422365 1.4723207819491485e-06 5.831997557761561 -0.1840665931448694 DIEQSIK ddPTM_A549_MK2206_60min_R1 1 DIEQSIK 7 0 Q6P452;P09525;P09525-2 Q6P452 ANXA4 Annexin;Annexin A4 0 105.57 0.027074 3340300.0 2113.7 2788.8 2044.4 1880.1 2696.3 2179.8 1667.0 2446.7 3202.4 3092.4 3852.7 False True 2470.440884996522 2930.7380080721064 2334.3266614124077 2340.724584400896 2299.677841767013 2410.464989165867 1969.8723220024935 2793.527217704497 2477.061513181962 2393.8246922349244 2895.9682608893304 0.8530621410325361 1.0120062597551047 0.8060608581033113 0.8082701098671837 0.7940963555521837 0.8323520052756486 0.6802119859551086 0.9646263239247745 0.8553482946050226 0.8266059834163371 1.0 11.499830075581656 -10.410055341692164 0.6245958574131188 1.0083333744178968 0.8405890240001354 0.0 0.09637928224555124 0.8291498399625082 0.548469756195632 0.07279988043169361 0.01796074452132077 3.8899557253640154e-11 10.410055341692164 -0.16774435041776148 DIEQSIK ddPTM_A549_PD325901_60min_R1 1 DIEQSIK 7 0 Q6P452;P09525;P09525-2 Q6P452 ANXA4 Annexin;Annexin A4 0 105.57 0.027074 4596500.0 2691.4 2800.7 2620.7 2936.8 2854.2 2285.3 3288.0 3093.6 3101.3 2557.6 3191.6 False True 2964.628946696039 3036.7248180575048 2798.5564615493204 3118.199466043276 2653.730838455456 2266.6892744887996 3413.1266392626385 3031.8957211177476 2970.9631460612613 2396.112699517252 2799.0534332193406 1.059154109568484 1.0849113425336814 0.9998224500954065 1.1140192713137558 0.9480815217604683 0.8098056462901315 1.219386024845199 1.083186081814309 1.0614170886492147 0.856043929379853 1.0 11.45072331251781 -14.999715424012736 0.005302626550065405 0.38486403582179757 1.6363629811482545 0.021130508753717914 0.11044223052987698 225468.8696248478 93.1664686002005 11883.584781807076 10168.124046507795 1.0006554751561097e-15 14.999715424012736 1.251498945326457 DIEVLS(ph)EDT(ph)DYEEDEVTKK ddPTM_A549_PD325901_60min_R1 2 DIEVLSEDTDYEEDEVTKK 19 1 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 2 DIEVLS(1)EDT(1)DYEEDEVTKK;DIEVLS(1)EDT(0.989)DY(0.011)EEDEVTKK 123.14 9.293700000000002e-15 24141000.0 7301.5 8267.0 7986.1 8689.8 10921.0 9695.0 8666.400000000001 8744.400000000001 9748.7 10461.8 10190.8 True False 8042.742904919796 8963.68910303902 8528.084770320544 9226.549210032294 10153.946635404678 9616.047134367001 8996.20459443605 8569.986082150905 9338.996041017446 9801.240162578044 8937.396204803748 0.8998977689494077 1.002941896905179 0.9542023845532097 1.0323531595335484 1.136119111508903 1.075933852993838 1.0065800360960493 0.958890697667027 1.0449347692561557 1.0966549918990935 1.0 13.125638866678582 -5.018581084306408 1.1097760532176453 1.0268255166169993 0.7903059989524894 0.36596055031660035 0.051832327809018856 2.321035497069375 1.6067056006784606 0.007413983408739285 0.7264592259938245 9.581178156420362e-06 5.018581084306408 -0.23651951766450985 DIFYYEDDS(ph)EGEDIEK ddPTM_A549_PD325901_60min_R1 2 DIFYYEDDSEGEDIEK 16 0 Q15361;A0A087WY09 Q15361 TTF1 Transcription termination factor 1 1 DIFYYEDDS(1)EGEDIEK;DIFYYEDDS(1)EGEDIEK 137.52 1.3830999999999999e-10 4044500.0 2898.3 2988.7 3269.1000000000004 3540.8 3617.0 3761.2 2872.1000000000004 3107.8 2531.8999999999996 3528.0 3508.6 True False 3192.5332823843096 3240.5682378435604 3490.9607846952695 3759.507174259748 3362.954397972598 3730.5700342218856 2981.399337173426 3045.8124909780636 2425.493047919424 3305.2414779077553 3077.064442847905 1.0375256487737172 1.0531362920837395 1.1345101311769383 1.2217836980951313 1.0929099667669275 1.2123795596458629 0.9689102690400795 0.9898435822680018 0.7882490253192637 1.0741541294626467 1.0 11.58733894295933 -8.02586522517925 2.5757325383745644 0.9033913565303724 1.1247379306233003 0.3638182425388361 0.09213156346918437 0.16512284272854516 2.1957105115656934 0.015554143670422306 0.021331800906650884 9.421819389448779e-09 8.02586522517925 0.2213465740929279 DIGFIKLD ddPTM_A549_MK2206_60min_R1 2 DIGFIKLD 8 1 P62273;A0A087WTT6 P62273 RPS29 40S ribosomal protein S29 0 ; 114.89 0.0036192 4863200.0 2637.4 2701.3999999999996 2758.1 2392.5 3173.4 2178.1000000000004 2365.22 2396.3 3638.2 3667.2 3697.5 False True 3082.5286417608118 2838.8897213876867 3149.240053238879 2978.662607403408 2706.5970637775613 2408.5850962942336 2794.949858096422 2735.9828633609686 2814.1535090115576 2838.7769730189866 2779.3087041914214 1.109099049383075 1.0214373513479853 1.1331019287240642 1.0717278735216944 0.9738382280801678 0.8666130151939917 1.0056277137841552 0.9844112887621609 1.012537220053169 1.0213967842931166 1.0 11.440510371547175 -6.704191399042698 6.290597273470444 0.991830396882795 1.0839539716602364 0.5161445818621435 0.047345518699754896 0.14569747063495428 11.724597367679964 0.00684179326608143 0.014264776255849584 1.9760985566789968e-07 6.704191399042698 0.09212357477744149 DIGFIKLD ddPTM_A549_PD325901_60min_R1 2 DIGFIKLD 8 1 P62273;A0A087WTT6 P62273 RPS29 40S ribosomal protein S29 0 ; 114.89 0.0036192 10073300.0 4751.7 4602.2 4857.4 5185.0 5226.799999999999 6170.9 4981.6 6162.4 5882.1 5901.700000000001 5517.9 False True 5234.08908598334 4990.043545422304 5187.052373919061 5505.265674010616 4859.687599481107 6120.646236355376 5171.177514036121 6039.486097690722 5634.895792553748 5529.06565480958 4839.2332808500405 1.0815947035857592 1.031164082370043 1.0718748348928375 1.137631801259968 1.00422676846599 1.2647966901236567 1.0685943854989715 1.248025409642961 1.1644191270655058 1.1425499317607533 1.0 12.240562772339992 -6.011578592601326 22.27421242380398 1.1021468887069128 1.0551643878084995 0.05346919602555311 0.08362666000938089 370.4516684208283 712677.4816619488 0.012890817033444395 0.03646189036475045 9.736915641682519e-07 6.011578592601326 -0.04698250089841327 DIGS(ph)ETEFADDEHSIFGDNESR ddPTM_A549_PD325901_60min_R1 3 DIGSETEFADDEHSIFGDNESR 22 0 A0A590UJB2;A0A0C4DG82;A0A2R8YDP4;Q15858-4;Q15858-3;Q15858-2;Q15858 A0A590UJB2 SCN9A Sodium channel protein type 9 subunit alpha 1 DIGS(0.5)ET(0.5)EFADDEHSIFGDNESR;DIGS(0.904)ET(0.096)EFADDEHSIFGDNESR;DIGS(0.858)ET(0.142)EFADDEHSIFGDNESR 91.175 5.0633e-07 3946300.0 928.6 1130.22 1112.11 833.14 1589.8500000000001 1120.59 1262.8799999999999 1725.15 1109.28 1415.28 1481.48 True False 1022.8707884008107 1225.4676059074352 1187.5844722607003 884.6011656017758 1478.1844206847486 1111.4642865704307 1310.9395894744525 1690.7405298960055 1062.660819225111 1325.9189792668049 1299.2673518754816 0.7872673679703451 0.943198952962593 0.9140416485848213 0.6808461432705605 1.137706122262675 0.8554546413915821 1.0089837073040604 1.3013030208566663 0.8178923434743196 1.0205128123575582 1.0 10.343482611166493 -6.756568325858874 24.999994003991006 0.9576566510948687 0.8452359785000849 0.21147282608240692 0.14572193433403396 223.32822567246032 1146186.0145000645 0.021732521116721294 0.044127220592498205 1.7515868421963332e-07 6.756568325858874 -0.11242067259478383 DIGSET(ph)EFADDEHSIFGDNESR ddPTM_A549_MK2206_60min_R1 1 DIGSETEFADDEHSIFGDNESR 22 0 A0A590UJB2;A0A0C4DG82;A0A2R8YDP4;Q15858-4;Q15858-3;Q15858-2;Q15858 A0A590UJB2 SCN9A Sodium channel protein type 9 subunit alpha 1 DIGS(0.482)ET(0.517)EFADDEHS(0.001)IFGDNESR 55.358000000000004 0.0053615 1368600.0 183.72 0.0 0.0 154.42 181.19 132.04 0.0 141.05 276.49 153.87 274.94 True False 214.7274444772488 0.0 0.0 192.25290693217718 154.53719102094166 146.01238515894164 0.0 161.0442694475086 213.86545646380233 119.1106601326439 206.6648100420256 1.039013097747912 0.0 0.0 0.9302643584705217 0.747767319407287 0.706517888213527 0.0 0.7792534656227154 1.0348421505350256 0.5763470815782453 1.0 7.691148943802142 -8.512251244584617 9.416917990412108 1.010924833508406 0.47974427502239086 0.15260374430119472 0.3716114442749054 0.17391893452538784 133.06723973516029 0.05681382794781959 0.06662660351484415 3.0743177703607463e-09 8.512251244584617 -0.5311805584860152 DIHYS(ph)VK ddPTM_A549_PD325901_60min_R1 1 DIHYSVK 7 0 A0A087X020;Q9Y3A5 A0A087X020 SBDS Ribosome maturation protein SBDS 1 DIHY(0.055)S(0.945)VK 47.198 0.034662 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DIIDYES(ph)DVEPETKR ddPTM_A549_MK2206_60min_R1 2 DIIDYESDVEPETKR 15 1 F5GYN7;Q5FWF4-2;Q5FWF4-3;Q5FWF4 F5GYN7 ZRANB3 DNA annealing helicase and endonuclease ZRANB3;DNA annealing helicase ZRANB3;Endonuclease ZRANB3 1 DIIDYES(1)DVEPETKR;DIIDY(0.045)ES(0.94)DVEPET(0.016)KR 88.551 1.5367e-05 21882000.0 1888.6 1308.13 1568.53 1388.2 2459.55 1660.37 1538.12 1395.33 2182.3 2209.24 2502.2 True False 2207.3495081631395 1374.7082295250154 1790.971139808847 1728.3090623186663 2097.7534531461843 1836.069251335595 1817.5764942522335 1593.1223005189086 1688.0125344169999 1710.171149616184 1880.834682793178 1.1736010231824643 0.7309032750733161 0.9522214558214777 0.9189053552287754 1.1153311199211118 0.9761991673871608 0.9663669597760706 0.8470294147027343 0.8974805440689646 0.9092618108660427 1.0 10.87715733246216 DIIDYES(ph)DVEPETKR ddPTM_A549_PD325901_60min_R1 2 DIIDYESDVEPETKR 15 1 F5GYN7;Q5FWF4-2;Q5FWF4-3;Q5FWF4 F5GYN7 ZRANB3 DNA annealing helicase and endonuclease ZRANB3;DNA annealing helicase ZRANB3;Endonuclease ZRANB3 1 DIIDYES(1)DVEPETKR;DIIDY(0.001)ES(0.999)DVEPET(0.001)KR 96.48700000000001 7.1027e-06 40694000.0 6317.7 6565.6 6669.1 6196.9 7691.4 7159.5 6851.0 6918.9 7183.1 7989.5 7921.0 True False 6959.068253155076 7118.906153975201 7121.705230556177 6579.668438818978 7151.182597889529 7101.195405724656 7111.718554011049 6780.897111727955 6881.219286903124 7485.041606503396 6946.767215356055 1.0017707571619543 1.0247797188652914 1.0251826511205695 0.9471554515709705 1.029425972714561 1.0222302238697782 1.02374505054529 0.9761226915360804 0.9905642543616496 1.077485595020007 1.0 12.76212603840907 -8.251437103822289 24.56663840894359 0.9939631160933222 1.0104478258373362 0.0 0.03373941237686157 993.2207653979607 2439456.4921315876 0.0035498866357413098 0.004546118111625894 5.604835828496766e-09 8.251437103822289 0.016484709744013948 DIIHDPGR ddPTM_A549_MK2206_60min_R1 2 DIIHDPGR 8 0 P62917;E9PKZ0;G3V1A1;E9PKU4 P62917 RPL8 60S ribosomal protein L8 0 ; 68.383 0.0081306 18976400.0 339.95 319.12 395.03 275.025 479.15 417.4 297.762 429.08 631.6800000000001 424.5 543.17 False True 397.32524902047 335.3618449282737 451.05119402159244 342.4061373463413 408.66766972616665 461.5689909523039 351.8615011062424 489.9034040023889 488.6054885856805 328.6051551719459 408.2858982706299 0.9731544750955501 0.8213897329022641 1.1047435043240603 0.8386430655495709 1.000935059126837 1.1305043669334758 0.8618017487172996 1.1999028280855768 1.1967238904288857 0.804840815134232 1.0 8.673435929156637 -7.379255538286855 1.0456055122807093 1.09541015173351 0.9354130342502686 0.0 0.14291409631131335 0.5475676609754657 1.1878797449607896 0.020497054612387235 0.0427617762237942 4.175845881379198e-08 7.379255538286855 -0.1599971174832414 DIIHDPGR ddPTM_A549_PD325901_60min_R1 2 DIIHDPGR 8 0 P62917;E9PKZ0;G3V1A1;E9PKU4 P62917 RPL8 60S ribosomal protein L8 0 ; 102.51 0.0023775 23634000.0 1417.89 1335.94 1537.8 1731.5500000000002 1715.43 1362.6100000000001 1439.92 1645.6399999999999 1552.3600000000001 1465.1100000000001 1707.4099999999999 False True 1561.833149004551 1448.524352281837 1642.1643555426203 1838.503910864626 1594.9441147122302 1351.5133559319056 1494.7169435544572 1612.8164192203944 1487.1197076773158 1372.6027045627627 1497.4093941637532 1.0430234744699034 0.9673535894242091 1.0966702639525694 1.227789753443721 1.0651356408799255 0.9025677020589783 0.9982019275291113 1.0770711239734754 0.9931283411693942 0.9166515916839895 1.0 10.548252995158435 -7.021677152455635 24.585578193739984 0.9970561727618102 1.0850912751674553 0.3043613025616262 0.07258196500802472 644.6058664149942 731092.7271312644 0.010253828415378908 0.01787372049322467 9.513117207225502e-08 7.021677152455635 0.08803510240564505 DIIRQPS(ph)EEEIIK ddPTM_A549_MK2206_60min_R1 2 DIIRQPSEEEIIK 13 1 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 DIIRQPS(1)EEEIIK;DIIRQPS(1)EEEIIK 165.9 8.859799999999999e-20 53048000.0 4977.1 6597.2 5679.8 4769.5 6141.6 4227.6 3758.0 3948.5 6582.6 8714.900000000001 7501.4 True False 5817.112801587826 6932.9693010804995 6485.281046512518 5938.027714110992 5238.178775728328 4674.96182594624 4440.779955660086 4508.211966774105 5091.651610252179 6746.198037239087 5638.595351892233 1.0316599150239933 1.2295560983559306 1.1501589743155 1.0531040699911678 0.9289864671651724 0.8291004291303488 0.7875684773460153 0.7995274860894589 0.9030000013289644 1.1964323765448355 1.0 12.461120097773824 -6.593960259447395 2.794461510915798 0.9170807228668312 1.1443604048655183 0.4156117444139531 0.11429099745846115 0.15789348479118304 2.487505188390743 0.013545327137903814 0.031546596188291164 2.5470633135074344e-07 6.593960259447395 0.2272796819986871 DIIRQPS(ph)EEEIIK ddPTM_A549_PD325901_60min_R1 1 DIIRQPSEEEIIK 13 1 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 DIIRQPS(1)EEEIIK 185.99 8.4175e-26 60433000.0 3062.2 4017.6 2905.4 3720.1 4136.2 4486.3 4103.8 4689.5 3808.3 4466.8 3883.6 True False 3373.0722897275045 4356.177251768426 3102.5779155894993 3949.882128039903 3845.687581115359 4449.765060228022 4259.972354685525 4595.964243658421 3648.2503947199907 4184.765485691144 3405.9418201687645 0.990349356455058 1.2789934419820996 0.9109309786847053 1.1597033468540534 1.1291113542640623 1.3064712479461953 1.25074724690231 1.3493959927450232 1.0711428988940332 1.2286661683151678 1.0 11.73383807597012 -8.977422757327252 18.344791942084015 1.0313834413236618 1.1744879348345363 0.0 0.13826904196627554 9.249258863381392 7516.201460412603 0.021855026183315494 0.022542074420394822 1.053361018971688e-09 8.977422757327252 0.1431044935108745 DIIS(ph)IAEDEDLR ddPTM_A549_PD325901_60min_R1 2 DIISIAEDEDLR 12 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 DIIS(1)IAEDEDLR;DIIS(1)IAEDEDLR 111.79 6.0509e-05 1041630.0 582.02 486.39 431.42 372.98 339.62 227.55 387.14 552.31 297.0 479.5 348.42 True False 641.1062419395213 527.3797922858533 460.69875553921014 396.01812750096036 315.7662628253948 225.69690824396207 401.8728245511368 541.2937437711871 284.51812284532133 449.2242881680181 305.5665488163563 2.0980903977314034 1.7259081346721805 1.5076871382805954 1.2960126984939209 1.03337968127908 0.7386178530281617 1.3151728358612316 1.771443064916446 0.9311167205554134 1.470135686998904 1.0 8.255342806125396 -2.0000000107679643 0.4037945448889972 1.009062855232371 20.234222713610798 0.4292797592056895 0.29645153451181283 31.04307288725502 0.35898706675862246 0.061003110422988185 482.0715976256678 0.009999999752058463 2.0000000107679643 19.225159858378426 DIISDT(ph)SGDFRK ddPTM_A549_MK2206_60min_R1 2 DIISDTSGDFRK 12 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 DIIS(0.014)DT(0.493)S(0.493)GDFRK;DIIS(0.011)DT(0.495)S(0.495)GDFRK 49.31 0.019430000000000003 6006900.0 1384.96 1703.92 1102.6100000000001 1203.63 1724.9099999999999 1513.15 1732.21 1731.44 2113.95 1886.8999999999999 2460.9 True False 1618.7073889789383 1790.6422499692417 1258.9766778223131 1498.5194040330036 1471.1780239744594 1673.2705286523224 2046.9301349105792 1976.8769223126142 1635.1437002844775 1460.6479794910354 1849.790612615191 0.8750760101925522 0.9680242929969642 0.6806049664412563 0.8101021779510664 0.7953213806694273 0.9045729377373644 1.10657396623755 1.0687030785164118 0.8839615084718964 0.7896288204349816 1.0 10.85314625851818 -7.519379765690761 24.97644736132522 0.9677606144780597 0.827300601534579 0.31214907617121945 0.10187998490903585 130.0673243172568 928449.0132546682 0.014555776680265194 0.02184718522731454 3.024267722320049e-08 7.519379765690761 -0.14046001294348076 DIISDTSGDFRK ddPTM_A549_MK2206_60min_R1 2 DIISDTSGDFRK 12 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 157.68 7.892799999999999e-14 14070100.0 2898.8 3741.9 3049.8 3163.1 4353.1 3842.9 3090.3 3984.6 5171.9 4608.3 4601.0 False True 3388.0465711443994 3932.3467270528563 3482.307499498906 3938.059641996956 3712.7647565167017 4249.553127289434 3651.767508508878 4549.429252325722 4000.472907827189 3567.2818293966516 3458.4447188599675 0.9796445646993676 1.1370274926207595 1.006899858918897 1.1386793666301793 1.0735359557057103 1.2287468711340992 1.055898765301831 1.3154552471277852 1.1567259947835438 1.0314699581413465 1.0 11.75590768066399 -5.250330379628246 23.28527294258386 1.1017033529758207 0.979644379863096 0.1360048169036877 0.09274986397717379 1087.7584196462417 2279902.4605003353 0.01336105654261208 0.25927093994787487 5.619136995185043e-06 5.250330379628246 -0.12205897311272462 DIISDTSGDFRK ddPTM_A549_PD325901_60min_R1 3 DIISDTSGDFRK 12 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;; 155.48 9.634800000000001e-14 23132700.0 5687.3 5869.35 5809.88 6462.18 7881.5 6566.4 6179.09 6744.68 6588.400000000001 6560.1 7764.86 False True 6264.670509231026 6363.980722985618 6204.1733944465905 6861.334181924388 7327.930629698929 6512.925415482981 6414.238651277788 6610.152066300897 6311.51245977816 6145.894166446334 6809.8314455030495 0.9199450176359318 0.9345283762035176 0.911061227300066 1.0075629972391384 1.076081058443526 0.9564003848852773 0.9419085777098792 0.9706777795015744 0.9268235947228972 0.90250312590407 1.0 12.733403374272957 -5.730425659807298 0.0037501434829358333 1.9048570219647647 1.303276446490544e-08 0.0 0.05032890681571538 99275.91749821947 63.150418754297505 15642.596442552851 16441.35557558756 1.8602629657759654e-06 5.730425659807298 -1.9048570089320003 DIISIAEDEDLR ddPTM_A549_MK2206_60min_R1 2 DIISIAEDEDLR 12 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 ; 194.54 6.2336e-24 2251800.0 840.0699999999999 879.75 906.6800000000001 783.8299999999999 1587.28 727.35 1101.97 1211.63 1357.55 1327.38 1187.98 False True 981.8532782604091 924.525517283934 1035.2608576449832 975.8683851874656 1353.7932146571013 804.3176942241456 1302.1836848692776 1383.3822629612528 1050.0670925618829 1027.5239360945525 892.9717794199665 1.0995344991732838 1.0353356495593438 1.1593433090544485 1.0928322794493517 1.5160537498021083 0.9007201714107846 1.4582584969427772 1.5491892295407526 1.1759241632965807 1.150679069345265 1.0 9.802470772361765 -10.018074829461966 1.1904927771316063 1.0263912265959083 1.2203823849243496 0.06053002848764266 0.2005855866922788 0.6039167836247763 1.719670498064361 0.06328153376663465 0.03621377635088882 9.592353398727334e-11 10.018074829461966 0.19399115832844127 DIISIAEDEDLR ddPTM_A549_PD325901_60min_R1 2 DIISIAEDEDLR 12 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 ; 166.97 1.4424000000000002e-14 3256100.0 1397.3600000000001 1136.27 1225.56 1096.01 1683.71 1645.98 1600.7199999999998 1304.6100000000001 1415.27 1688.62 1727.75 False True 1539.2189585179378 1232.0274606399125 1308.7338714909702 1163.7080484806895 1565.4520180841703 1632.5756846029299 1661.6362755475934 1278.588530103254 1355.7911236339985 1582.0002450183076 1515.2477031096362 1.0158200242502313 0.8130865059960225 0.8637095234034329 0.7679985563366923 1.033132744482307 1.077431552116865 1.0966103245941468 0.8438148610813248 0.8947653382688545 1.0440538809408388 1.0 10.565337940298804 -6.770551208143782 24.99950319532556 0.9668577133190855 0.861331411085391 0.28518400652940823 0.09330313509960594 230.9085036134459 633529.0048334734 0.013921354631343705 0.026574405914330065 1.6960896026640394e-07 6.770551208143782 -0.10552630223369452 DIKEES(ph)DEEEEDDEESGR ddPTM_A549_MK2206_60min_R1 4 DIKEESDEEEEDDEESGR 18 1 Q96EV2;H7BXM6;A8MTF7;H7C0H2;Q96EV2-2 Q96EV2 RBM33 RNA-binding protein 33 1 DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR 249.12 6.2798e-87 572241000.0 14177.8 15817.2 14410.2 13098.5 18393.5 14866.900000000001 14951.4 17294.1 18826.2 21245.199999999997 19609.699999999997 True False 16570.66602606978 16622.227919276433 16453.783044553467 16307.633088014014 15687.840515722108 16440.105490150476 17667.875845943654 19745.59163595999 14562.095759263764 16445.894564567785 14740.070289812727 1.124191791508771 1.1276898679896064 1.1162621833577777 1.1063470368445036 1.0642988945964804 1.1153342668598187 1.1986290091272098 1.339585988922096 0.9879258017736885 1.1157270108768749 1.0 13.847455783665096 DIKEES(ph)DEEEEDDEESGR ddPTM_A549_PD325901_60min_R1 4 DIKEESDEEEEDDEESGR 18 1 Q96EV2;H7BXM6;A8MTF7;H7C0H2;Q96EV2-2 Q96EV2 RBM33 RNA-binding protein 33 1 DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR 257.11 2.2401e-87 816373000.0 30913.5 29084.8 29425.5 30184.4 33894.6 28561.1 28625.9 30850.2 31138.3 28205.4 33241.1 True False 34051.815762684084 31535.878169114472 31422.491379905965 32048.82183425383 31513.960226022133 28328.50787100253 29715.274289193523 30234.86855948629 29829.66553735512 26424.506230436327 29152.655432694395 1.1680519409732855 1.0817497651945394 1.0778603497184676 1.0993448575635212 1.080997931690283 0.971729931649122 1.0192990603479695 1.0371222830554985 1.0232229309684586 0.9064185007586486 1.0 14.831339679959708 -2.000000000023083 0.27835324546061563 1.0044095509969027 2.138433856147568 0.6326745660323707 0.04067267415067894 17.222789123853772 0.21398709881604452 0.01048664124753626 9.641456128412822 0.009999999999468497 2.000000000023083 1.1340243051506653 DIKEES(ph)DEEEEDDEESGRLR ddPTM_A549_MK2206_60min_R1 4 DIKEESDEEEEDDEESGRLR 20 2 Q96EV2;H7BXM6;A8MTF7;H7C0H2;Q96EV2-2 Q96EV2 RBM33 RNA-binding protein 33 1 DIKEES(1)DEEEEDDEESGRLR;DIKEES(1)DEEEEDDEESGRLR;DIKEES(1)DEEEEDDEESGRLR;DIKEES(0.998)DEEEEDDEES(0.002)GRLR 246.2 1.7943999999999997e-86 239915000.0 10553.4 13244.2 12764.5 10475.800000000001 16152.9 9452.4 9941.900000000001 8555.2 19446.3 18846.8 21019.1 True False 12334.555914142164 13918.273209448002 14574.698038348022 13042.371470276534 13776.829807617236 10452.646694004694 11748.214539961953 9767.925799201174 15041.74409935998 14589.294790328924 15799.477372351566 0.7806939193904684 0.8809325069071212 0.9224797564413835 0.8254938541891358 0.8719800967420682 0.6615818009459221 0.7435824782736702 0.6182436019241143 0.9520406115256959 0.9234036320631458 1.0 13.947589216129861 -8.96580623907837 22.57563927285671 0.9788417466097863 0.7934778372548467 0.4218267508694302 0.08829448545481927 39.59370665887389 26141.12654288116 0.016019571579463803 0.01695530876850107 1.0819165417934006e-09 8.96580623907837 -0.18536390935493963 DIKEES(ph)DEEEEDDEESGRLR ddPTM_A549_PD325901_60min_R1 4 DIKEESDEEEEDDEESGRLR 20 2 Q96EV2;H7BXM6;A8MTF7;H7C0H2;Q96EV2-2 Q96EV2 RBM33 RNA-binding protein 33 1 DIKEES(1)DEEEEDDEESGRLR;DIKEES(1)DEEEEDDEESGRLR;DIKEES(1)DEEEEDDEESGRLR;DIKEES(1)DEEEEDDEESGRLR 291.31 2.0730999999999995e-144 431303000.0 36379.899999999994 37563.4 36917.7 39800.9 44119.3 49092.8 44520.8 51977.5 47877.8 49606.2 50277.100000000006 True False 40073.16066653311 40728.99954676376 39423.15712616452 42259.31119859771 41020.51257132222 48693.00451346598 46215.06340671655 50940.76798694005 45865.66256553441 46474.05606615292 44093.33543279611 0.9088257958532019 0.9236996735899003 0.894084258748138 0.9584058630131601 0.9303109453772834 1.104316650929716 1.0481190173774497 1.1552940481125613 1.0401948982843348 1.0539927544602592 1.0 15.428272993049893 -7.171957135595089 7.754947420916208 1.0384933691136733 0.9228443619940625 0.7001501021371354 0.044839049332164614 0.17421256384587364 13.53542371934469 0.00744637164921097 0.012929844394423011 6.730430816447843e-08 7.171957135595089 -0.11564900711961079 DIKFDDS(ph)DTEQIAEEGDDNLAK ddPTM_A549_PD325901_60min_R1 1 DIKFDDSDTEQIAEEGDDNLAK 22 1 E9PDH4 E9PDH4 PIKFYVE 1 DIKFDDS(0.935)DT(0.065)EQIAEEGDDNLAK 173.05 8.858299999999998e-41 9726500.0 1957.6 2239.4 1969.7 2836.7 3049.1 2277.0 2979.4 2165.9 2978.6 2780.2 2294.8 True False 2156.334110891047 2428.122097174982 2103.375686768306 3011.9165163868706 2834.9417348239563 2258.456866936944 3092.782697390239 2122.699425384321 2853.4198003605193 2604.6576975280987 2012.5541479357516 1.0714415376613686 1.2064878352045696 1.045127500756046 1.4965642139249524 1.4086288002395941 1.122184398990413 1.5367450861197758 1.0547291001146695 1.4178102006781939 1.294205028073237 1.0 10.974811884240882 -11.01143887921749 1.276159772169087 0.9990208460511371 1.2798861833819983 0.0 0.1923785345874171 0.49442325586176866 1.425413057287097 0.1208379707458898 0.026993384989103864 9.740048530380462e-12 11.01143887921749 0.2808653373308613 DIKFDDS(ph)DTEQIAEEGDDNLANSAS(ph)PSKR ddPTM_A549_PD325901_60min_R1 2 DIKFDDSDTEQIAEEGDDNLANSASPSKR 29 2 Q9Y2I7;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 2 DIKFDDS(0.642)DT(0.358)EQIAEEGDDNLANS(0.249)AS(0.621)PS(0.13)KR;DIKFDDS(0.674)DT(0.326)EQIAEEGDDNLANS(0.299)AS(0.617)PS(0.084)KR 153.54 2.0704e-37 26445000.0 6334.700000000001 6133.5 6507.4 6582.0 7808.5 7943.799999999999 6441.200000000001 8018.5 6811.5 7413.8 7539.6 True False 6977.794080640336 6650.391570520125 6949.0312961750915 6988.555191193423 7260.057897862601 7879.108326558492 6686.323390759887 7858.564727108437 6525.236342629314 6945.69140275298 6612.2769974622515 1.055278549782226 1.0057642130044615 1.0509286436188447 1.0569059937863439 1.0979663889835474 1.1915877585864056 1.0111983199321586 1.1884808712829942 0.9868365080793888 1.0504235387323748 1.0 12.690931447056172 DIKFDDS(ph)DTEQIAEEGDDNLANSASPSKR ddPTM_A549_PD325901_60min_R1 2 DIKFDDSDTEQIAEEGDDNLANSASPSKR 29 2 Q9Y2I7;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 DIKFDDS(0.851)DT(0.149)EQIAEEGDDNLANSASPSKR;DIKFDDS(0.981)DT(0.019)EQIAEEGDDNLANSASPSKR 166.19 2.9229e-47 36107000.0 4860.9 5673.0 6080.5 6076.299999999999 6458.1 6692.6 5735.6 6471.4 6492.5 7152.7 7236.8 True False 5354.374989594554 6151.083619395232 6493.159295016845 6451.619250721452 6004.505335235506 6638.0976845244595 5953.871396640752 6342.322850284913 6219.642803276929 6701.077301312584 6346.719477854905 0.8436445014274133 0.9691752787968195 1.023073308608156 1.0165281880241541 0.9460801530911428 1.045910049701462 0.9381021829332641 0.9993072598237038 0.9799775813282162 1.055833226077521 1.0 12.631795362220323 -5.2780856232428395 3.701345751376156 0.9916631041242661 0.8301868847321197 0.608374409617144 0.03557337188415032 0.09695452255754423 2.4740095099518356 0.0036099557259562775 0.04171257855143965 5.27125925769625e-06 5.2780856232428395 -0.1614762193921464 DIKSITR ddPTM_A549_PD325901_60min_R1 1 DIKSITR 7 1 A0A1B0GW91;P15884-2;A0A1B0GWD5;P15884-11;P15884-4;P15884-13;P15884-3;H3BTP3;A0A1B0GVR6;E9PH57 A0A1B0GW91 TCF4 0 50.878 0.051666 10667000.0 2236.2 2322.6 2378.1 2450.5 3068.1 3096.1 2857.2 2661.2 2636.8 2837.4 2992.4 False True 2463.217377796568 2518.3336531654104 2539.492166677011 2601.8618195107074 2852.607240370396 3070.886388108682 2965.932309519833 2608.1202783289864 2525.9844657190015 2658.246079766287 2624.353770386498 0.9385995918659248 0.9596014384884269 0.9676638094044047 0.9914295278595469 1.0869751146204203 1.1701495517719096 1.1301572002173432 0.9938142897346035 0.9625167514465821 1.0129145352895 1.0 11.357746497141003 -6.29648105144247 3.2490374299191 1.015186973941612 0.9537642702734065 0.19163314943243803 0.06496540153741202 0.4752256052830407 10.21575833145331 0.01130592657600782 0.03014127793253414 5.052646894942042e-07 6.29648105144247 -0.06142270366820546 DINTFLGT(ph)PVQK ddPTM_A549_MK2206_60min_R1 1 DINTFLGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DINT(0.011)FLGT(0.989)PVQK 161.04 5.4823e-14 7884600.0 4869.8 4865.7 5466.7 5376.7 7616.3 7273.1 6424.7 6233.1 8398.6 6658.3 7200.5 True False 5691.703184820959 5113.343346914959 6241.960262151837 6693.9917413692365 6495.952359251602 8042.734614506951 7591.984827336183 7116.661013068169 6496.330509808279 5154.185405609818 5412.41712630976 1.0516009856582542 0.9447430284075846 1.1532666674579954 1.2367841548704261 1.2001943323390167 1.4859783395871724 1.4026976580263086 1.314876670993091 1.20026419956245 0.9522890208434459 1.0 12.40205731445484 -4.143124166240935 15.441898103035538 1.1575547286451406 1.1463799495563622 0.0 0.1721832428972006 0.0 0.0 0.024486901907477286 0.0 7.192433145425521e-05 4.143124166240935 -0.011174779088778397 DINTFLGT(ph)PVQK ddPTM_A549_PD325901_60min_R1 2 DINTFLGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DINT(0.008)FLGT(0.992)PVQK;DINT(0.002)FLGT(0.998)PVQK 150.12 3.7097e-12 9078200.0 6602.299999999999 7075.1 5953.2 6038.5 7052.5 6589.3 6326.8 7282.2 7376.4 7340.3 7391.200000000001 True False 7272.560635643625 7671.34350706561 6357.219951499765 6411.484430571482 6557.156729804184 6535.638925475452 6567.569836157802 7136.950808224615 7066.395560121977 6876.832205296563 6482.129256677147 1.121940082905978 1.1834604345730177 0.9807302045005173 0.9891016017564145 1.011574510497419 1.0082549524514934 1.0131809434982562 1.1010195146715016 1.0901349356529701 1.0608909407680875 1.0 12.662252073615878 -5.754666573038946 24.999981523564095 1.0342857583369307 1.1527002869017664 0.5827411582026527 0.04033596843647335 99.28725401557011 366481.80959346186 0.006524639729034134 0.02417959185027675 1.7592737673978392e-06 5.754666573038946 0.1184145285648357 DINTFVGT(ph)PVEK ddPTM_A549_MK2206_60min_R1 2 DINTFVGTPVEK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DINT(0.038)FVGT(0.962)PVEK;DINT(0.001)FVGT(0.999)PVEK 173.06 9.293e-16 23315000.0 6132.1 7341.4 6928.4 6049.7 11199.7 9630.8 8362.0 9609.599999999999 12978.7 9552.4 9856.3 True False 7167.048564548973 7715.045902345288 7910.951301570007 7531.876771581349 9552.23896615288 10649.92486359236 9881.267160518799 10971.790228165743 10039.045172725057 7394.506205570074 7408.708689958593 0.9673816132442683 1.0413482598933725 1.0677908435368946 1.0166247704933644 1.2893257605201194 1.4374873286658922 1.3337367649387257 1.480931520905442 1.355033055400261 0.9980830013727265 1.0 12.855006392788663 -6.754173853683149 24.629458983983717 1.235907592653637 1.0277553422873937 0.37531228420399787 0.14925739873385757 168.09286469931521 569812.8082270579 0.026303392989109768 0.05386144347633381 1.761270845832065e-07 6.754173853683149 -0.20815225036624319 DINTFVGT(ph)PVEK ddPTM_A549_PD325901_60min_R1 2 DINTFVGTPVEK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DINTFVGT(1)PVEK;DINT(0.003)FVGT(0.997)PVEK 165.34 1.9077e-14 46114000.0 9523.6 8920.5 8593.400000000001 9449.2 10093.2 8656.6 8481.099999999999 8722.1 8231.3 9011.3 10384.7 True False 10490.42886109623 9672.26184149747 9176.59980031211 10032.855623309764 9384.288451649712 8586.103519686587 8803.85290153599 8548.130873144915 7885.367086116812 8442.324980121923 9107.447734037118 1.1518516677170179 1.0620167278423658 1.0075929138760304 1.1016100137269123 1.0303971788471498 0.9427562771069089 0.9666652127613637 0.9385868711821561 0.8658152444451541 0.9269693581189116 1.0 13.152831095293134 -7.15239518138853 2.643318462278296 0.9375319666602037 1.0745920357435184 0.6909001794456429 0.04425790947555581 0.1638096572953139 2.227816430178838 0.008606683839316367 0.015871218137662776 7.040521330701787e-08 7.15239518138853 0.1370600690833147 DIPGLTDTTVPR ddPTM_A549_MK2206_60min_R1 2 DIPGLTDTTVPR 12 0 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 ; 145.99 1.9699e-11 7534600.0 4221.9 3991.3 3609.0 3632.9 5216.0 4553.2 3954.7 4255.8 5965.4 5573.0 5538.7 False True 4934.453504455134 4194.4401217793275 4120.810468126286 4522.960663087079 4448.733309593417 5035.016601830449 4673.217799534046 4859.072682840885 4614.246424786308 4314.055429383404 4163.287929656535 1.1852299403328126 1.0074825937213914 0.9897971357619376 1.086391510629969 1.0685624882928602 1.2093846706984377 1.1224824894394416 1.1671238609820942 1.1083178734570434 1.0362135654017344 1.0 12.023507622223354 -4.398164012186861 16.314183438847984 1.075151625606939 1.0811521005951055 0.0 0.0745489628228105 0.0 0.0 0.010547321677425966 0.0 3.9979373833652684e-05 4.398164012186861 0.00600047498816636 DIPGLTDTTVPR ddPTM_A549_PD325901_60min_R1 1 DIPGLTDTTVPR 12 0 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 136.02 9.004099999999999e-08 10590000.0 2735.1 2915.4 2854.7 2948.9 3603.3 2720.0 2873.6 3473.1 3008.2 2942.0 3386.5 False True 3012.765338525798 3161.0909895971913 3048.437108705634 3131.0468555621824 3350.2166387101647 2697.8492218131273 2982.9564204942562 3403.8262959057565 2881.7758152972915 2756.2416179151373 2969.981968792233 1.014405262450453 1.06434686230862 1.026416032399451 1.054230930848192 1.128025918646421 0.9083722561824943 1.0043685287784085 1.1460764178612 0.9703007781118579 0.9280331149740902 1.0 11.536238456895875 DIPRT(ph)PSR ddPTM_A549_MK2206_60min_R1 7 DIPRTPSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DIPRT(1)PSR;DIPRT(0.998)PS(0.002)R;DIPRT(1)PSR;DIPRT(0.994)PS(0.006)R;DIPRT(0.986)PS(0.014)R;DIPRT(0.983)PS(0.017)R;DIPRT(0.985)PS(0.015)R 112.83 0.00055749 1007399600.0 14518.58 15521.69 14067.199999999999 12397.739999999998 17135.3 13323.66 12425.240000000002 13957.76 20132.000000000004 20351.699999999997 20674.4 True False 16968.961358798682 16311.677722501698 16062.140486901106 15435.186856555702 14614.720068994648 14733.560857670289 14682.745273088329 15936.315223847276 15572.134144197882 15754.23683513048 15540.375895587591 1.0919273428654137 1.0496321216485571 1.0335747728896094 0.9932312422982152 0.9404354287945013 0.9480826562151317 0.944812749172768 1.025478104964765 1.0020435959093696 1.0137616323427292 1.0 13.923733780086666 -5.803221074738505 1.6859316234260717 0.9904078162803173 1.0858926390652823 0.5965794467526195 0.02843772927580676 0.2675297177897095 1.325102744623283 0.004455631223530727 0.02951302721707127 1.573181842776268e-06 5.803221074738505 0.09548482278496506 DIPRT(ph)PSR ddPTM_A549_PD325901_60min_R1 6 DIPRTPSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DIPRT(1)PSR;DIPRT(0.996)PS(0.004)R;DIPRT(0.995)PS(0.005)R;DIPRT(0.996)PS(0.004)R;DIPRT(0.972)PS(0.028)R;DIPRT(0.955)PS(0.045)R 72.096 0.0023033000000000003 1470799600.0 26531.789999999997 28194.710000000003 25255.079999999998 27198.530000000002 30185.199999999993 23796.049999999996 25894.2 25829.73 26771.92 30291.81 33993.4 True False 29225.27778912853 30570.777161043367 26969.041599933225 28878.521425756626 28065.095685286808 23602.262858355214 26879.61795084995 25314.535772118794 25646.78930425963 28379.179946967364 29812.427301916996 0.9803052094067258 1.0254373738658176 0.9046241463941135 0.9686739403436526 0.941389152955089 0.7916920893199979 0.9016246036806785 0.8491269602355063 0.8602717599787821 0.9519244997921564 1.0 14.86362622263685 -5.7656594745636145 24.93814619387878 0.9168131822402527 1.002871300777318 0.2795077168728384 0.05742801097451394 117.7561621112295 695886.9947555911 0.009607172136780206 0.03149527146650775 1.715301729230087e-06 5.7656594745636145 0.08605811853706535 DIQLAR ddPTM_A549_MK2206_60min_R1 2 DIQLAR 6 0 K7EK07;P84243;Q6NXT2;P68431;Q71DI3;Q16695 K7EK07;P68431 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 ; 169.05 8.1498e-05 199338000.0 10546.0 12202.900000000001 10611.099999999999 9606.6 13380.900000000001 10930.400000000001 10429.8 10442.0 15044.2 13517.5 14601.5 False True 12325.906975054791 12823.975487199907 12115.913537914892 11960.217431256664 11412.587335571045 12087.047672987697 12324.759654482063 11922.185477283834 11636.712720650783 10463.88736168853 10975.544569101028 1.1230337499385115 1.1684135950121952 1.1039009009196952 1.0897151713936584 1.039819688555628 1.1012708842726433 1.1229292156654733 1.0862500172290168 1.0602401227007099 0.9533820664486258 1.0 13.422004902695102 -14.99999999936424 0.05392052413397702 0.5721155750977706 1.2948810490037264 0.7208820396942155 0.03064827036790051 132.64348060096282 0.5438768829063136 7.811750910187939 1.642053231214682 1.0000000014638912e-15 14.99999999936424 0.7227654739059558 DIQLAR ddPTM_A549_PD325901_60min_R1 4 DIQLAR 6 0 K7EK07;P84243;Q6NXT2;P68431;Q71DI3;Q16695 K7EK07;P68431 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 ;;; 159.42 0.0030703 406618000.0 19806.300000000003 19338.5 21178.300000000003 19224.4 21679.1 20969.7 21557.600000000002 20763.2 20414.2 21289.300000000003 23220.1 False True 21817.020995372593 20968.223263471657 22615.58679346358 20411.84752621981 20156.43480483487 20798.92971568187 22377.986264771353 20349.0616875847 19556.262166292778 19945.08996474534 20364.174904341504 1.0713432337846083 1.0296623046093252 1.1105574814446368 1.0023410043422945 0.9897987470406991 1.0213490020284435 1.0988899069021705 0.9992578527326643 0.9603267629627122 0.9794204802519735 1.0 14.313745741372761 -8.506528097434106 23.9045475437069 0.9811878804444141 1.0437029098033734 0.4068117161034618 0.03616205124130425 321.60991658524017 470192.1937513981 0.006165812397362365 0.007347957436004663 3.115099352703376e-09 8.506528097434106 0.06251502935895936 DIS(ph)ENKR ddPTM_A549_MK2206_60min_R1 3 DISENKR 7 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 DIS(1)ENKR;DIS(1)ENKR;DIS(1)ENKR 86.13600000000001 0.0093949 678643000.0 30743.9 30675.4 27249.0 18957.600000000002 16359.0 13108.1 12937.0 13792.3 15342.8 36786.3 36973.8 True False 35932.71870381065 32236.64683477303 31113.31794014221 23602.212851039 13952.612770636255 14495.19044154742 15287.485440759594 15747.40076214726 11867.680297416999 28476.249280805074 27792.18503503254 1.292907292410324 1.1599176816841916 1.1194988051829433 0.8492391951654032 0.5020336743242296 0.5215563448241287 0.5500641788865989 0.5666125474588407 0.4270150145610206 1.0246135467546096 1.0 14.762391643928988 -6.317235451709703 2.525980313553121 0.6682209666366828 1.210339896205986 0.609918764120587 0.18696034631209027 0.185723325058782 2.3034380473767455 0.033138228982206835 0.09379759166203029 4.816865816000409e-07 6.317235451709703 0.5421189295693031 DIS(ph)ENKR ddPTM_A549_PD325901_60min_R1 4 DISENKR 7 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 DIS(1)ENKR;DIS(1)ENKR;DIS(1)ENKR;DIS(1)ENKR 99.44200000000001 0.005155 1470020000.0 42845.9 41611.8 41891.899999999994 39935.7 46776.2 40668.200000000004 36092.6 37321.2 46372.1 46856.0 47248.0 True False 47195.58422651551 45118.572422624784 44734.93625045907 42402.43748844472 43490.8010811296 40337.01166269874 37466.12364362853 36576.79938808498 44423.24190032163 43897.50416350503 41436.79552974916 1.1389776555629618 1.088852838300016 1.0795944927339287 1.0233039728663933 1.0495696041433944 0.9734587616394988 0.9041752182967451 0.8827130312677054 1.0720723292521106 1.0593846266898035 1.0 15.33862481761023 -5.962675893700254 1.1718565071702065 1.009160824308617 1.1343937693684614 0.4072664595294707 0.05788321349609051 0.6586439592560228 1.410164787355328 0.010014294737413533 0.07370396434102598 1.0897430459337713e-06 5.962675893700254 0.1252329450598444 DIS(ph)GPSPSK ddPTM_A549_MK2206_60min_R1 1 DISGPSPSK 9 0 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.818)GPS(0.178)PS(0.003)K 146.71 2.9583e-05 78266000.0 17140.0 17387.0 15775.0 14575.0 24804.0 19715.0 17249.0 18559.0 22674.0 23777.0 22082.0 True False 20032.812967232985 18271.924034118514 18012.132206897244 18145.875654296604 21155.36445766011 21801.22821424216 20382.92002532754 21189.79508455379 17538.375202937754 18405.759186156316 16598.429967803924 1.2069101117449514 1.1008224313721644 1.0851708409672172 1.0932284372373935 1.2745400919662462 1.3134512274070582 1.2280028933377685 1.2766144223071558 1.0566285628795644 1.1088855525406969 1.0 14.018759164206838 -8.900248799738884 5.871493116652442 1.0245880274969736 1.1941253195017292 0.38401203002074 0.07831569766760044 0.13668338261897167 6.754530168295658 0.014644318671389572 0.015490574792921825 1.2582044019156666e-09 8.900248799738884 0.16953729200475554 DIS(ph)LDSELHDLR ddPTM_A549_MK2206_60min_R1 2 DISLDSELHDLR 12 0 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 DIS(1)LDSELHDLR;DIS(1)LDSELHDLR 154.47 3.1755e-14 8631800.0 293.05 145.4 286.696 271.09000000000003 439.12 143.52 196.56 282.11 690.35 437.92999999999995 534.91 True False 342.50967561538073 152.80023894638703 327.3538038154433 337.5070621696925 374.5260296987466 158.70719113913432 232.27240768614874 322.099956425641 533.9868272624182 339.00130884440597 402.0770842350327 0.8518507745026521 0.3800272259661239 0.8141568287539854 0.8394088482108172 0.9314781776516732 0.39471831984924216 0.5776812874776388 0.8010900622164246 1.3280707809507444 0.8431251671290074 1.0 8.651328304071233 -8.616232462380623 5.551034815530596 1.153940067132942 0.682354116727933 0.35840391116245685 0.2066806600975035 0.1185844205590804 5.735042197382341 0.03437809338074493 0.03900836169172274 2.419733502806518e-09 8.616232462380623 -0.47158595040500906 DIS(ph)LDSELHDLR ddPTM_A549_PD325901_60min_R1 2 DISLDSELHDLR 12 0 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 DIS(0.865)LDS(0.135)ELHDLR;DIS(0.965)LDS(0.035)ELHDLR 130.24 2.2739e-08 16441200.0 381.33000000000004 588.9200000000001 451.95 555.38 555.94 739.17 660.16 572.95 521.32 579.45 791.96 True False 420.04234087969127 638.5503552149198 482.6220447961292 589.6845612405044 516.8926922888818 733.1504445910325 685.2827500534128 561.5220627794199 499.4107333391341 542.8634281104445 694.5539406480724 0.6047656147307426 0.9193675506600727 0.6948661818055566 0.8490119006311925 0.744208134225804 1.0555702036719374 0.9866515902479671 0.8084642961718373 0.719038082014401 0.7816000980484122 1.0 9.439942931329934 DIS(ph)LSDYK ddPTM_A549_PD325901_60min_R1 1 DISLSDYK 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 1 DIS(0.983)LS(0.012)DY(0.005)K 47.706 0.036996 699030.0 1804.4 1885.4 1575.0 1497.3 2191.1 2268.3 1650.0 1682.3 2101.3 1980.2 2251.3 True False 1987.581359670928 2044.2892748118754 1681.8889712443936 1589.7848203849746 2037.2046948846446 2249.827716852469 1712.7916529146441 1648.7452067611816 2012.9896684675869 1855.1698340569535 1974.4043721665312 1.0066739051483853 1.0353954355199584 0.8518462554855681 0.8051971737889183 1.0318072242968153 1.1394969280703697 0.8674979031955763 0.835059539982683 1.0195427526625236 0.939609869289977 1.0 10.94720177900273 DIS(ph)PVLKDPASFR ddPTM_A549_PD325901_60min_R1 2 DISPVLKDPASFR 13 1 H3BQF1;P07741-2;P07741;H3BSW3;H3BQZ9;H3BQB1 H3BQF1 APRT Adenine phosphoribosyltransferase 1 DIS(1)PVLKDPASFR;DIS(1)PVLKDPASFR 130.02 1.2445e-08 22497000.0 5504.9 5504.1 5597.1 5670.1 6635.1 6080.9 6600.8 6285.8 6487.9 6537.6 6991.4 True False 6063.75339550681 5967.949823640629 5976.952864096506 6020.329199268582 6169.0734658523625 6031.379166515969 6851.997056096356 6160.424787885295 6215.236125279997 6124.814820286202 6131.502122136132 0.9889507130096663 0.9733259003686809 0.9747942257931107 0.981868566518767 1.006127592059471 0.9836707296799757 1.117507083844768 1.0047170603830904 1.0136563604604436 0.9989093534150812 1.0 12.582024839602877 -6.904318706091846 2.0405711977070284 1.0141196161554233 0.978246961994951 0.23115759892516197 0.033386301451321834 0.424312148915216 3.572887957622844 0.005001303463459759 0.010717360039371359 1.246468460271628e-07 6.904318706091846 -0.03587265416047236 DIS(ph)QNKR ddPTM_A549_MK2206_60min_R1 2 DISQNKR 7 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 1 DIS(1)QNKR;DIS(1)QNKR 78.516 0.0070009 100982000.0 24528.0 22886.0 17036.0 14261.0 17833.9 15882.7 13098.8 14839.3 18348.7 35855.0 36301.0 True False 28667.726747974957 24050.79964599047 19451.960968412142 17754.94564020063 15210.55693442447 17563.396771917018 15478.682406386471 16942.816218450298 14192.74874685295 27755.330597621007 27286.45984336791 1.050620964116852 0.8814188349844189 0.7128796142875246 0.6506870345995449 0.5574397346426551 0.6436671108211158 0.5672660541249593 0.6209239423401538 0.5201388831062509 1.0171832754026924 1.0 14.735897610448836 -5.5038533396130545 2.4163429558202547 0.7106870043289321 1.0581899596609756 0.31962360160355296 0.15807244979294105 0.4139472895142171 4.01572003759162 0.026946220443368477 0.23788754412543364 3.1343440073830083e-06 5.5038533396130545 0.34750295533204356 DIS(ph)QNKR ddPTM_A549_PD325901_60min_R1 4 DISQNKR 7 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 1 DIS(1)QNKR;DIS(1)QNKR;DIS(1)QNKR;DIS(1)QNKR 108.3 0.0037639 229202000.0 40330.600000000006 37634.9 31958.5 29374.1 33462.7 26096.6 21285.5 25619.1 32025.9 41154.1 46006.6 True False 44424.93282218149 40806.52510269306 34127.39599207236 31188.471443578634 31112.395392048 25884.077941900137 22095.531350372523 25108.106952704835 30679.96279606726 38555.62310259736 40348.079859866186 1.1010420564367551 1.0113622567522198 0.8458245376384942 0.7729852709695234 0.771099777241077 0.6415194485536537 0.5476228714504632 0.6222875299124112 0.760382226431159 0.9555751658196809 1.0 15.300212397722559 -5.68521984262864 2.5733455422635436 0.8092793211651695 1.0924568514358597 0.3916890200211821 0.1330968884558549 0.3166136952713359 3.964352008272879 0.02359768970785462 0.1307062169000199 2.0643349118177493e-06 5.68521984262864 0.28317753027069015 DISEGGES(ph)PVVQS(ph)DEEEVQVDTALATSHTDR ddPTM_A549_PD325901_60min_R1 2 DISEGGESPVVQSDEEEVQVDTALATSHTDR 31 0 D6RJC6;A0A087WYP9;A6NFV8;Q96EV8-3;Q96EV8 D6RJC6 DTNBP1 Dysbindin 2 DIS(0.008)EGGES(0.992)PVVQS(1)DEEEVQVDTALATSHTDR;DIS(0.032)EGGES(0.968)PVVQS(0.998)DEEEVQVDT(0.001)ALATSHTDR 87.005 2.1016999999999995e-09 8911600.0 1043.6 1239.48 1100.3000000000002 1209.62 1617.13 1197.62 1369.24 1300.45 1449.98 971.23 1354.0 True False 1149.5455037422853 1343.9353295554383 1174.972974641401 1284.3354801536589 1503.5483675956398 1187.8669797896453 1421.3471774768782 1274.51150456671 1389.042383041275 909.9063720488517 1187.46658371318 0.9680655603357559 1.131766862317072 0.9894787699770786 1.0815761030828945 1.2661816241549126 1.0003371851317393 1.1969576213524755 1.0733030487319843 1.1697528183890213 0.7662585074214013 1.0 10.213671200051271 -5.249051490867707 23.39408377903341 1.0919091980429751 0.9680653687681908 0.016516236704130827 0.1289398651319821 1227.0102887459946 2317060.1468312475 0.01195493665947198 0.2663933327475476 5.635708337207193e-06 5.249051490867707 -0.12384382927478432 DISEGGESPVVQS(ph)DEEEVQVDTALATSHTDR ddPTM_A549_MK2206_60min_R1 2 DISEGGESPVVQSDEEEVQVDTALATSHTDR 31 0 D6RJC6;A0A087WYP9;A6NFV8;Q96EV8-3;Q96EV8 D6RJC6 DTNBP1 Dysbindin 1 DISEGGES(0.001)PVVQS(0.999)DEEEVQVDTALATSHTDR;DISEGGES(0.003)PVVQS(0.995)DEEEVQVDT(0.002)ALATSHTDR 108.32 5.1246000000000005e-15 6132500.0 598.93 592.58 518.87 658.03 911.0999999999999 885.05 642.1 799.27 1330.97 898.9 1247.21 True False 700.014741567378 622.7397908861764 592.4535681897169 819.247379540089 777.078396926872 978.7054035513572 758.7612585229759 912.5689701617164 1029.5074201223454 695.837865686837 937.4933357551276 0.7466876988555161 0.6642604988595198 0.6319549650051755 0.8738700834392658 0.8288895155728809 1.043959851472474 0.8093510957193232 0.9734138210451008 1.0981490543536532 0.742232332911846 1.0 9.872664624796258 -6.9334861744031215 0.650293715918885 1.0411408960185176 0.6526151576140309 0.3320860573065667 0.12161158663066009 0.3337931195379542 0.24866549603064417 0.016394761713465184 0.06452011227305052 1.1655041536206176e-07 6.9334861744031215 -0.3885257384044867 DISEGGESPVVQS(ph)DEEEVQVDTALATSHTDR ddPTM_A549_PD325901_60min_R1 2 DISEGGESPVVQSDEEEVQVDTALATSHTDR 31 0 D6RJC6;A0A087WYP9;A6NFV8;Q96EV8-3;Q96EV8 D6RJC6 DTNBP1 Dysbindin 1 DISEGGES(0.005)PVVQS(0.994)DEEEVQVDT(0.001)ALATSHTDR;DISEGGESPVVQS(1)DEEEVQVDTALATSHTDR 173.96 2.9589999999999997e-58 14166500.0 1046.48 1557.74 1144.97 1498.71 1865.97 1215.6599999999999 1234.3000000000002 1024.04 1026.05 1357.8600000000001 1249.09 True False 1152.7178792221405 1689.0162166890045 1222.674549463932 1591.2819128826338 1734.910704447035 1205.7600680107882 1281.271961934876 1003.6147188561607 982.9286866849887 1272.1244878661632 1095.459848633897 1.0522684885800675 1.5418330656256432 1.1161290402278816 1.4526154608651847 1.5837282458234967 1.1006885095007746 1.1696201951469947 0.916158378700714 0.8972749552717598 1.1612698443056377 1.0 10.097320891547668 -7.807413246043527 1.8031777739697963 0.9494515714337861 1.3459562489958012 0.4144531330127992 0.17530381396768974 0.18108920401112333 1.204614317731053 0.025065682148874332 0.03793050940827496 1.5580692411147106e-08 7.807413246043527 0.39650467756201513 DISENKR ddPTM_A549_MK2206_60min_R1 1 DISENKR 7 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 75.109 0.018468000000000002 12916000.0 4682.1 4677.8 3917.2 2957.3 3052.2 2372.8 2817.1 2955.6 3067.4 5841.7 6168.6 False True 5472.324013645364 4915.880039500752 4472.717862494953 3681.838632758242 2603.2254232248924 2623.888121062835 3328.930604866958 3374.565351145385 2372.6387976312612 4522.055912763147 4636.766375300936 1.180202660801559 1.0601957574758554 0.9646200607216628 0.7940530824176543 0.5614312243747536 0.5658874975974048 0.7179422760222427 0.7277842095131155 0.5117011739624842 0.9752606766757052 1.0 12.17890332263487 -6.03174740960893 1.9058570790841718 0.7288109920043395 1.1382338041972524 0.5249029502601719 0.14853119255422242 0.27623806563436737 1.899345251116889 0.027379563808083766 0.11628730262335951 9.295068408792806e-07 6.03174740960893 0.4094228121929129 DISENKR ddPTM_A549_PD325901_60min_R1 1 DISENKR 7 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 111.82 0.0080854 33770000.0 4919.5 4321.0 4469.2 3892.4 4858.5 3874.0 3751.1 4251.2 4244.6 4314.8 5000.3 False True 5418.924018455509 4685.145834550816 4772.506787482819 4132.824707718211 4517.255720915084 3842.4514284206043 3893.850163180683 4166.406480998118 4066.214222994109 4042.3627916316277 4385.294799513305 1.2357034740416812 1.0683764829381115 1.088297823902851 0.9424280228952648 1.0300916876594988 0.8762127984752707 0.8879335007563997 0.9500858372076878 0.9272385116378928 0.9217995542922821 1.0 12.09845811513143 -5.166945697940778 0.8272490916053031 0.9534998221459511 1.4161899463669003 0.769620951447926 0.04876877113355616 1.0413292716320932 0.46356508563364207 0.007996891493980312 0.4554747453152055 6.808544840885292e-06 5.166945697940778 0.46269012422094924 DISGPS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 DISGPSPSK 9 0 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.378)GPS(0.618)PS(0.004)K 145.41 3.2028e-05 71936000.0 19721.0 18602.0 17245.0 17705.0 25667.0 22335.0 21348.0 23468.0 24880.0 25351.0 24741.0 True False 23049.422667841412 19548.7623444339 19690.60031112159 22042.725794807644 21891.41830086929 24698.4748752269 25226.65526701212 26794.66086773577 19244.719725195864 19624.191492965856 18597.126883137258 1.239407722100408 1.051171101174748 1.0587979764216067 1.1852758726292631 1.1771398043597312 1.3280801400361457 1.35648132238567 1.4407957227001305 1.034822198403443 1.0552270582591916 1.0 14.182792132516012 -8.960560936616078 24.999505250829703 1.0153625960748816 1.2232505264013676 0.3842599259926386 0.11215901366359343 117.51219427358348 74488.6126918021 0.021290385796292357 0.02263060059515868 1.095062894402486e-09 8.960560936616078 0.207887930326486 DISGPS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 DISGPSPSK 9 0 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.078)GPS(0.921)PS(0.001)K;DIS(0.001)GPS(0.996)PS(0.002)K 158.02 1.1235e-05 196716000.0 36597.0 36513.0 38154.0 37286.0 45672.0 37351.0 39350.0 38369.0 38774.0 40028.0 42219.0 True False 40312.30049871255 39590.07865238466 40743.359878640396 39589.07153735004 42464.156279846415 37046.8258396846 40847.4857831462 37603.70019510178 37144.463620217124 37500.625248778786 37026.330648291536 1.0887468402319969 1.0692412118404562 1.1003888088629805 1.0692140118717586 1.1468637463217217 1.000553530177963 1.1032010212178824 1.015593485411628 1.0031905125314122 1.0128096571327176 1.0 15.176263963414568 -8.253249322648914 1.1460426075012862 0.9998426813608178 1.0868131365144293 0.5103858932071885 0.0342602395183719 0.2233063125075299 0.5726762987539135 0.005838603394975562 0.00769717936614912 5.5814967648472576e-09 8.253249322648914 0.08697045515361157 DISGPS(ph)PSKK ddPTM_A549_MK2206_60min_R1 2 DISGPSPSKK 10 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.005)GPS(0.518)PS(0.476)KK;DISGPS(0.921)PS(0.079)KK 132.32 8.096500000000001e-07 184501000.0 9843.9 8892.199999999999 8927.8 8099.67 11717.4 9377.800000000001 9744.5 10905.199999999999 12453.8 12504.5 12177.6 True False 11505.309659751743 9344.774998342935 10193.896286322493 10084.089513608009 9993.785981945919 10370.152571520168 11514.949515148937 12451.04549577434 9633.034184632003 9679.724765247578 9153.565835337786 1.256921058603734 1.0208890356441178 1.1136530254656019 1.1016569602501673 1.0917915664477358 1.1329085034255928 1.2579741843003864 1.3602399021053058 1.052380499350669 1.0574813072167493 1.0 13.160118149458478 -8.977239697356891 24.949873501417315 1.0231089047538715 1.1606123922913076 0.28940284063539157 0.09096885430067726 138.54084522261965 151870.42830825955 0.016680560489145294 0.01716903854203916 1.0538051159848586e-09 8.977239697356891 0.13750348753743613 DISGPS(ph)PSKK ddPTM_A549_PD325901_60min_R1 4 DISGPSPSKK 10 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.014)GPS(0.907)PS(0.079)KK;DIS(0.001)GPS(0.887)PS(0.112)KK;DIS(0.002)GPS(0.971)PS(0.028)KK;DIS(0.001)GPS(0.499)PS(0.499)KK 136.3 2.2866999999999997e-07 487628800.0 31061.699999999997 29616.3 30627.2 28805.399999999998 36881.5 26219.9 30125.199999999997 27726.699999999997 29485.5 29492.2 30670.2 True False 34215.060917585026 32112.169539413884 32705.745968315114 30584.644136190043 34291.07067426772 26006.373827580148 31271.630971141974 27173.669217324627 28246.326973588264 27630.05745882966 26897.959834416524 1.2720318242800746 1.193851494206102 1.215919206127574 1.1370618561581882 1.2748576801126585 0.9668530248269769 1.1626023372645997 1.0102501968404058 1.0501289743710032 1.0272175893234996 1.0 14.71520913045809 -7.030392266088292 0.4357584583373373 1.0104748837405397 1.2751523358615668 0.6053604376436202 0.06756327093818339 0.6835742343225759 0.21264103758711064 0.017207983959169948 0.07447718827892029 9.324117417715848e-08 7.030392266088292 0.2646774521210271 DISGPSPS(ph)KK ddPTM_A549_MK2206_60min_R1 2 DISGPSPSKK 10 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.002)GPS(0.369)PS(0.629)KK;DISGPS(0.346)PS(0.653)KK 96.015 0.00043819999999999997 150259400.0 6187.7 5680.0 5354.200000000001 4910.0 7464.1 6169.700000000001 4786.6 5705.3 7248.6 6733.0 6536.799999999999 True False 7232.0324852594895 5969.087738758448 6113.506070502013 6112.950220418278 6366.140777633481 6822.573558884599 5656.263261246031 6514.0437467484635 5606.803673635641 5212.010623728416 4913.532153497902 1.471860213657311 1.2148262293366912 1.2442181875516698 1.2441050611761073 1.2956342970303916 1.388527304950608 1.1511603230721479 1.3257354471795144 1.1410943285766848 1.0607462128884269 1.0 12.262544781360758 -9.282464299463713 0.6077024580202622 1.0110934278850952 1.300216395342745 0.5860831777598418 0.08530615794811629 0.29365689595498784 0.24378192916138525 0.032060145174343864 0.021756632880036108 5.218379993977227e-10 9.282464299463713 0.28912296745764987 DISLSDYK ddPTM_A549_MK2206_60min_R1 2 DISLSDYK 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 167.24 4.0414e-05 34862000.0 8881.1 8521.2 8714.900000000001 7545.700000000001 10800.9 8279.3 8279.8 8349.4 10956.6 10576.5 10820.1 False True 10380.01255795174 8954.892683012054 9950.803864969186 9394.396838739343 9212.101917865717 9155.410030645451 9784.132484532833 9532.9530189651 8474.9475940949 8187.261304301732 8133.170550431807 1.2762565955782943 1.1010334318559962 1.2234839787591663 1.1550719095938022 1.132658151054834 1.125687697543656 1.2029911857699054 1.1721078464853998 1.0420226087162217 1.0066506356327487 1.0 12.98960215180888 -8.819290713816898 3.7524388779420357 1.0178559161274516 1.1708222881159411 0.6927105716669597 0.04685069103178474 0.08738182666934474 2.4178585953928673 0.007853095705291668 0.00839232298025309 1.5160352039156486e-09 8.819290713816898 0.1529663719884895 DISLSDYK ddPTM_A549_PD325901_60min_R1 2 DISLSDYK 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 150.4 0.0017657 69919000.0 11788.8 11054.5 9030.4 11586.2 13480.5 10719.3 11737.3 11444.1 11931.0 11413.3 11479.0 False True 12985.590297544124 11986.101510771123 9643.257248206579 12301.85325983063 12533.676185200336 10632.005574772586 12183.969374397007 11215.838447777234 11429.58156117012 10692.662290194032 10067.155771376363 1.2898966294398322 1.1906144876441507 0.9578929210199526 1.2219790315362076 1.2450066801227966 1.0561081815185818 1.2102692807276625 1.1141020068117835 1.1353337348437083 1.0621333903063417 1.0 13.297368522265833 -14.999994670729913 0.1769271689344524 0.3366796064159806 1.1899097980177307 0.2350201890276311 0.08903142599402378 45.17537757415859 0.4966973783739243 10.302064229510371 0.10158338797094799 1.000012271173148e-15 14.999994670729913 0.8532301916017501 DISMEIDS(ph)PENMMR ddPTM_A549_PD325901_60min_R1 1 DISMEIDSPENMMR 14 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 DISMEIDS(1)PENMMR 77.527 0.00071376 736360.0 1066.6 1090.3 853.65 1237.0 1326.7 1105.8 1171.8 1201.3 1384.5 1113.3 1462.1 True False 1174.8804468105798 1182.1834074081823 911.5838224144609 1313.4066805691682 1233.5171688665314 1096.794731426821 1216.3934902335636 1177.3391290983807 1326.3142797284415 1043.006048003033 1282.2709690155402 0.9162497437749767 0.9219450771125234 0.7109135622982455 1.0242816942019146 0.9619785510807911 0.8553533207328885 0.9486243700638767 0.9181671873943145 1.0343478966436521 0.8134053356942158 1.0 10.324485448605413 -8.709907898240532 5.913048143234749 1.016217579088914 0.9058973368674496 0.0 0.0961748349662694 0.16959616843462935 12.979565769227651 0.012304435754981217 0.013860655349365661 1.9502581513216755e-09 8.709907898240532 -0.11032024222146453 DISNGALAFTPLDTADPAKS(ph)PKPSNGAGVPNGALR ddPTM_A549_PD325901_60min_R1 1 DISNGALAFTPLDTADPAKSPKPSNGAGVPNGALR 35 2 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 DISNGALAFT(0.006)PLDT(0.005)ADPAKS(0.985)PKPS(0.005)NGAGVPNGALR 68.839 8.496799999999999e-05 4905300.0 1366.1 1544.0 1102.3 1478.9 1671.2 1570.0 1190.7 1885.3 1620.4 1643.8 1860.5 True False 1504.7854663303328 1674.1182986684705 1177.1087066683783 1570.2482941744072 1553.820677327013 1557.2144405318413 1236.0127400760402 1847.6962125107611 1552.3002230927896 1540.0101874673367 1631.6702946812206 0.9222362331627314 1.0260150620659199 0.7214133336283787 0.9623563653104236 0.9522883896287289 0.9543683215953099 0.7575137845587365 1.1323955694564787 0.9513565504948182 0.9438243697193791 1.0 10.672133851602048 -8.262337026205932 24.9999261685539 0.9880401121282648 0.9040390788972018 0.21330990878297196 0.09656618217983352 116.13805118569081 3234504.7220937745 0.014689536577764246 0.018294120186350883 5.465916259367877e-09 8.262337026205932 -0.084001033231063 DISQNKR ddPTM_A549_PD325901_60min_R1 1 DISQNKR 7 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 0 55.676 0.039859 8209500.0 2999.2 2452.1 2311.8 2039.9 2497.1 2255.2 1837.7 1777.2 2431.7 3043.2 3682.9 False True 3303.676576105654 2658.7470726456986 2468.692649982722 2165.899990050967 2321.7123105273363 2236.834398909177 1907.6346791280255 1741.752351813571 2329.504105464536 2851.051832644237 3229.9266478266413 1.0228333136694103 0.82316020224011 0.7643184874318617 0.6705725009291965 0.7188127049540194 0.6925341169633997 0.5906123844675043 0.5392544604644705 0.7212250801522124 0.8826986317360048 1.0 11.657285686108104 -10.473660849508569 0.9527585940442151 0.9893569948396915 0.7217935972088616 0.29382930579134015 0.12374241870490398 0.41731509480275547 0.7157432654254652 0.0690591387142482 0.023384728378112188 3.359999018226979e-11 10.473660849508569 -0.2675633976308299 DISSS(ph)LNSLADSNAR ddPTM_A549_MK2206_60min_R1 1 DISSSLNSLADSNAR 15 0 O94776 O94776 MTA2 Metastasis-associated protein MTA2 1 DIS(0.006)S(0.102)S(0.583)LNS(0.296)LADS(0.013)NAR 73.834 0.00076143 1265600.0 839.73 915.74 828.63 1329.9 1655.2 1290.8 1246.1 1135.8 1696.5 1283.4 1821.2 True False 981.455894572611 962.3472545582142 946.1421940159282 1655.7255597014794 1411.7222726301811 1427.3915992363065 1472.5002402203388 1296.8031282416189 1312.2454587538089 993.4790486399888 1368.9457774370303 0.716942855406672 0.7029842017263397 0.6911465812673135 1.2094895115578386 1.0312477644463303 1.0426940370923234 1.0756454086714708 0.9473005794791387 0.9585810339476141 0.7257256386735796 1.0 10.418849588692582 -6.235193150116341 24.981621909131018 1.0048299700446786 0.7036204380245007 0.5884233464006889 0.10984973195472127 260.8776772622145 248307.66527683404 0.01015858129310495 0.026867733246275508 5.818443880814005e-07 6.235193150116341 -0.30120953202017786 DISTNYYASQK ddPTM_A549_PD325901_60min_R1 1 DISTNYYASQK 11 0 P14625;H0YIV0 P14625 HSP90B1 Endoplasmin 0 156.51 9.4514e-13 5819300.0 3996.8 3926.1 3974.2 4727.8 4781.6 4528.6 4477.3 5055.0 5042.0 4586.0 5009.0 False True 4402.552193711352 4256.966225649147 4243.913110806015 5019.825468387156 4445.756911624488 4491.7205830525445 4647.686101572568 4954.174059429213 4830.102274027305 4296.439177348343 4392.924754667147 1.0021915784088895 0.9690505673074519 0.9660791722638047 1.1427069091165232 1.0120266473722799 1.0224897611279216 1.0579935603574262 1.1277621029510652 1.0995185539874524 0.9780361415896561 1.0 12.100966072734176 -6.1860695317092755 24.99985277772024 1.0553675750801907 0.9781012160392037 0.31288616663393054 0.05012463387523104 123.26691295936176 40886.24206037482 0.00716824160371107 0.018965384469681653 6.515240749614759e-07 6.1860695317092755 -0.077266359040987 DITDPLSLNTCTDEGHVVLAS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 DITDPLSLNTCTDEGHVVLASPLK 24 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK 102.57 3.5131e-11 91142000.0 1572.48 1780.73 1860.55 1515.38 2491.67 1774.48 1892.03 2050.18 2818.38 2618.2 3195.4 True False 1837.876180555106 1871.3615508872053 2124.4039668806786 1886.6481680279942 2125.14864369529 1962.2542957955066 2235.7873601669926 2340.799293412924 2180.0214300280363 2026.7468015811287 2401.893991446455 0.7651778917388068 0.7791191274683379 0.8844703281851886 0.7854835287263563 0.8847803655212506 0.8169612409138044 0.930843479407919 0.9745639490122797 0.907625997563363 0.8438119287523563 1.0 11.229956763187136 -2.000000000075304 0.10513005411051446 1.0618755855611033 0.17747824714443078 0.379639072173942 0.059733187533331955 35.660486062930936 0.2551511687191424 0.22111429394818347 4.582724610409327 0.009999999998266057 2.000000000075304 -0.8843973384166726 DITDPLSLNTCTDEGHVVLAS(ph)PLK ddPTM_A549_PD325901_60min_R1 4 DITDPLSLNTCTDEGHVVLASPLK 24 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DITDPLSLNT(0.001)CT(0.003)DEGHVVLAS(0.995)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK 147.8 2.0596e-28 235223200.0 5622.969999999999 6327.69 6579.599999999999 6529.0 6271.599999999999 6324.26 7208.2 7497.900000000001 6733.6 6855.22 7454.1 True False 6193.809774988267 6860.946643329986 7026.131222348959 6932.281501565157 5831.104451845438 6272.7573233617195 7482.511995478388 7348.348502511242 6450.610208724765 6422.380239280837 6537.2929554331 0.9474578877240974 1.0495088242340278 1.074776864100849 1.0604208116149643 0.8919753928113695 0.9595343770158675 1.144588753554286 1.124065963175794 0.9867402689004026 0.9824219723766914 1.0 12.67447763471765 DITDPLSLNTCTDEGHVVLAS(ph)PLKTGR ddPTM_A549_MK2206_60min_R1 2 DITDPLSLNTCTDEGHVVLASPLKTGR 27 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DITDPLSLNTCTDEGHVVLAS(0.878)PLKT(0.122)GR;DITDPLSLNTCTDEGHVVLAS(0.871)PLKT(0.129)GR 91.48 3.1228e-09 5164700.0 1677.37 1881.27 1925.08 1696.16 2299.4 1463.01 1662.5900000000001 1683.92 2673.3 2509.4 2607.6099999999997 True False 1960.4690482408175 1977.0186074461458 2198.0852912110145 2111.719276143517 1961.1613059967606 1617.8247471325587 1964.6610820864569 1922.6208167887173 2067.8018183828813 1942.5247971460096 1960.068470625177 1.0002043691950786 1.0086477268906644 1.121432911223719 1.0773701571098535 1.0005575495897012 0.8253919551170285 1.0023430872595052 0.9808947215887232 1.054964073639398 0.9910494588622347 1.0 10.936688337219918 -6.776736388820312 24.08255064733129 1.0043373977917815 1.053789008173992 0.16576944577237918 0.06423575758500655 286.27624531708386 450693.3996952699 0.010198325477969446 0.019330956936130784 1.6721052527831253e-07 6.776736388820312 0.049451610382210465 DITDPLSLNTCTDEGHVVLAS(ph)PLKTGR ddPTM_A549_PD325901_60min_R1 2 DITDPLSLNTCTDEGHVVLASPLKTGR 27 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DITDPLSLNTCTDEGHVVLAS(0.97)PLKT(0.03)GR;DITDPLSLNTCTDEGHVVLAS(0.951)PLKT(0.049)GR 151.73 1.4097999999999999e-33 7607500.0 2243.8 2442.0 2245.5 2567.3 2866.2 3627.0 2845.7 2657.6000000000004 2993.9 2939.6 3327.2 True False 2471.588924201743 2647.795910199746 2397.8931332884345 2725.8762902386616 2664.887999853211 3597.4629145280173 2953.994670726789 2604.592083153131 2868.076794567702 2753.9931543247267 2917.9754928585617 0.8470218239497546 0.9074085497564829 0.8217660289323971 0.9341669581906898 0.9132660662761715 1.2328626211331897 1.012343893208281 0.8926024531486287 0.9828995485352837 0.9438027019297576 1.0 11.510752051235269 -6.793318024887942 2.790494081884585 1.0014509895314796 0.8698840810869773 0.34185062797228094 0.08513656536510535 0.23469789245677342 3.7367108362529042 0.012092785199277799 0.02565501127400479 1.6094666243487453e-07 6.793318024887942 -0.13156690844450225 DITSDT(ph)SGDFR ddPTM_A549_MK2206_60min_R1 1 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 DITS(0.001)DT(0.499)S(0.499)GDFR 107.06 0.0001544 6770900.0 1078.7 1163.4 996.79 961.32 1618.8 1361.1 978.4 1054.3 1424.3 1419.5 1724.4 True False 1260.7581883170503 1222.6120907168274 1138.1498106188978 1196.8434431552946 1380.6766644113925 1505.1306985749425 1156.1626153852656 1203.7502536583354 1101.6983241397293 1098.8339641144337 1296.1838889811193 0.9726692323788134 0.9432396908419192 0.8780774242716086 0.9233592959530516 1.065185793581102 1.1612015172924794 0.8919742215698121 0.9286878689755645 0.8499552675398028 0.8477454267528237 1.0 10.340054691851876 -5.257486199975108 19.708694566590122 0.9456696648202968 0.9726693073488967 0.004442345177242957 0.090796587408491 155.52662229527928 774610.4387519992 0.013105769707014022 0.1288093513115195 5.52730971096377e-06 5.257486199975108 0.026999642528599876 DITSDT(ph)SGDFR ddPTM_A549_PD325901_60min_R1 2 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 DITSDT(0.5)S(0.5)GDFR;DITS(0.001)DT(0.5)S(0.5)GDFR 106.29 0.00016929 15111600.0 1489.6799999999998 1258.9299999999998 1813.73 1695.87 1940.23 1361.08 1708.77 1588.78 1679.07 1448.56 1915.56 True False 1640.9112169555458 1365.0244493152193 1936.8206246445045 1800.620038299784 1803.9549382301284 1349.9958157446363 1773.7981774248228 1557.090536526202 1608.5045270232104 1357.097674387204 1679.9582637353176 0.9767571328272452 0.812534738976279 1.1528980608947177 1.0718242691911761 1.0738093779896112 0.8035889015141224 1.055858479174867 0.9268626311370829 0.957466957212834 0.8078163033465805 1.0 10.71420967632682 DITSDTS(ph)GDFR ddPTM_A549_MK2206_60min_R1 1 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 DITSDT(0.196)S(0.804)GDFR 132.32 7.619799999999999e-08 6666300.0 1578.1 1690.2 1491.4 1762.4 2550.2 1917.4 1488.2 1771.0 2306.9 2364.2 2262.7 True False 1844.4446991592981 1776.2239605720997 1702.9029460137283 2194.188079117143 2175.0689582295117 2120.2979953328895 1758.586676427179 2022.044673460033 1784.3908333623135 1830.1255779917897 1700.8091426569113 1.0844513078510427 1.044340552989608 1.0012310630889167 1.2900848332044488 1.278843641933708 1.2466407559525907 1.0339706157035415 1.188872180156149 1.0491423103328545 1.0760323025621013 1.0 10.732005541835614 -8.90855482609991 4.226979412863045 1.020724015506881 1.1465782548466945 0.1837218242815366 0.09620627822760182 0.23419644132406614 7.390113985078508 0.018122269247231027 0.019007981630181366 1.2343694763585817e-09 8.90855482609991 0.12585423933981343 DITSDTSGDFR ddPTM_A549_MK2206_60min_R1 2 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 251.56 1.0054999999999999e-61 43586000.0 6792.700000000001 6352.5 5720.0 5481.1 7368.1 6212.5 5773.5 5828.6 8622.2 8416.3 8537.4 False True 7939.141694429613 6675.815116278706 6531.182010995394 6823.969746055931 6284.262250463046 6869.902626476252 6822.470216605517 6654.821899338874 6669.285466824104 6515.051984625795 6417.327959746813 1.2371413373647873 1.0402795615485565 1.0177416600745264 1.0633662154809307 0.9792646238249889 1.0705238487994146 1.0631325466611634 1.0370082285153197 1.0392620587038273 1.0152281487703236 1.0 12.647756999195222 -5.2614555581882705 4.577642194437699 1.0269137185770567 1.2505005253579058 0.8254446869220282 0.026991519294742833 0.05677084573641393 3.0907227458175472 0.0038415845595575464 0.0406287425915756 5.477021450316585e-06 5.2614555581882705 0.22358680678084908 DITSDTSGDFR ddPTM_A549_PD325901_60min_R1 2 DITSDTSGDFR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 231.26 1.4632e-39 61803000.0 26749.0 23918.9 24374.5 25123.0 28960.0 26906.0 25909.0 28034.0 30063.0 31261.0 34647.0 False True 29464.538788426988 25934.62964638685 26028.70014577555 26674.790651527244 26925.949506576282 26686.886456655862 26894.981172948803 27474.839877752438 28799.556656898618 29287.17512496436 30385.63864542877 0.9696863420331514 0.8535160293656842 0.8566119162248156 0.8778749383153154 0.8861406475860607 0.8782730146983647 0.885121470928665 0.9042047856343399 0.9478015911714673 0.9638492534818035 1.0 14.891101994319051 -9.0772580987804 0.796864685923389 0.9896867631705849 0.8811808855666337 0.5860579846379919 0.03084139634289939 0.21089373494380362 0.2848589597172725 0.008132932449981645 0.006969254025333484 8.370316910335505e-10 9.0772580987804 -0.10850587760395125 DITTS(ph)ADQIAEVK ddPTM_A549_MK2206_60min_R1 1 DITTSADQIAEVK 13 0 F5H527;Q76I76;A0A3B3IS79 F5H527 SSH2 Protein phosphatase Slingshot homolog 2 1 DITT(0.016)S(0.984)ADQIAEVK 162.93 9.2441e-19 2157100.0 1981.1 2015.3 2116.9 1725.7 2343.8 2303.5 2094.6 2253.4 3447.5 2576.6 2571.3 True False 2315.4612467552683 2117.8701619577273 2417.108251586738 2148.496577469618 1999.0301248130852 2547.2548410604522 2475.1617070584407 2572.826350748074 2666.646754526236 1994.5442704735838 1932.7752457301965 1.1979981903589076 1.095766394274986 1.250589408637403 1.1116122178282155 1.0342796604153826 1.3179260478877395 1.2806257284836717 1.3311565100142144 1.3796983174413457 1.031958720953119 1.0 10.916458167052067 -5.7605393907406315 24.998612995140874 1.198145640832241 1.1468823221642337 0.017718155202943953 0.12827509041497598 108.74664761233299 3020066.907116482 0.021656676168278256 0.07524799742205115 1.7356438319127928e-06 5.7605393907406315 -0.051263318668007374 DIVEELS(ph)ALK ddPTM_A549_MK2206_60min_R1 1 DIVEELSALK 10 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DIVEELS(1)ALK 147.91 5.2379e-18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DIVEELS(ph)ALK ddPTM_A549_PD325901_60min_R1 1 DIVEELSALK 10 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DIVEELS(1)ALK 144.65 5.1974e-17 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DIVNGLR ddPTM_A549_PD325901_60min_R1 1 DIVNGLR 7 0 B1AK87;B1AK88;P47756-2;P47756 B1AK87 CAPZB F-actin-capping protein subunit beta 0 57.559 0.04231 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DIVQETQREEDHRR ddPTM_A549_MK2206_60min_R1 2 DIVQETQREEDHRR 14 2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 0 ; 74.678 0.00030248 12516900.0 1068.1399999999999 1587.1 1282.46 1132.97 1988.9499999999998 1501.67 1343.96 1032.83 1801.85 2148.0 2105.1 False True 1248.415918484262 1667.8766109478038 1464.3321122064954 1410.5477008609555 1696.3780897461338 1660.5757226721275 1588.1401354999814 1179.2368154092192 1393.7338519631892 1662.7653081492103 1582.3455721956348 0.7889654070646415 1.0540533245424308 0.9254186556572557 0.8914283489312037 1.0720654953976139 1.0494393587918611 1.0036620087332164 0.7452460676923631 0.8808024469833532 1.050823118139729 1.0 10.627848992468122 -6.658855673359013 0.0025247660349551637 1.8758164558967971 0.00011412802066095758 0.015108336496039931 0.10698153622717192 493497.74983615964 303.82722197445514 111577.63144018232 114147.8394486202 2.193533778973178e-07 6.658855673359013 -1.8757023278761362 DIY(ph)ETDYYR ddPTM_A549_MK2206_60min_R1 2 DIYETDYYR 9 0 C9J5X1;P08069;P06213-2;P06213 C9J5X1;P06213-2 IGF1R;INSR Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta 1 DIY(0.975)ET(0.023)DY(0.002)YR;DIY(0.996)ET(0.004)DYYR 108.74 1.6728e-06 1086800.0 480.38 557.03 503.77 520.98 863.61 546.39 748.13 509.59 581.8 901.66 759.48 True False 561.4563998366037 585.3804477325031 575.2121611327184 648.6201233876808 736.5741130172497 604.2086271356713 884.0555370484253 581.8259430539234 450.0232289436877 697.9743797699339 570.8801554183368 0.9834925851033876 1.0253998885344693 1.0075882926972775 1.1361756355191164 1.2902429801181188 1.0583808552478264 1.5485834087201644 1.0191735297359663 0.7882972015622333 1.2226285554775735 1.0 9.157044102909792 -8.521057983326234 24.975595609887538 0.9002242770649663 1.1512548355545182 0.0497450398841931 0.1851514754892614 61.33999733229448 841412.3304251755 0.02793022548038215 0.03190783229114317 3.0126037799566065e-09 8.521057983326234 0.2510305584895519 DIY(ph)ETDYYR ddPTM_A549_PD325901_60min_R1 2 DIYETDYYR 9 0 C9J5X1;P08069;P06213-2;P06213 C9J5X1;P06213-2 IGF1R;INSR Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta 1 DIY(0.999)ET(0.001)DYYR;DIY(0.974)ET(0.026)DYYR 127.56 5.4876e-05 2102540.0 1309.58 1242.31 1047.01 1550.76 1426.22 1136.0500000000002 1263.08 1694.65 1296.94 1466.1599999999999 2015.4499999999998 True False 1442.5275975381576 1347.0038235873246 1118.066394782599 1646.5469231685054 1326.0472273918929 1126.7983854561778 1311.147200583896 1660.8488763227926 1242.4341220303397 1373.586407383569 1767.5624269901975 0.8161112589355564 0.7620685996822192 0.6325470476799174 0.9315353721182243 0.7502123869253569 0.6374871790949349 0.7417826836342721 0.9396267147129188 0.7029081989177347 0.7771077198798063 1.0 10.787545453879916 -10.90438966786887 0.8852407958228536 1.0173534256545218 0.7631006398869804 0.011448850520518916 0.11520812630291681 0.511544681085717 0.6266503005508237 0.09239485908751316 0.016694697947683326 1.2462648095352634e-11 10.90438966786887 -0.2542527857675414 DIYETDYY(ph)RK ddPTM_A549_PD325901_60min_R1 1 DIYETDYYRK 10 1 C9J5X1;P08069;P06213-2;P06213 C9J5X1;P06213-2 IGF1R;INSR Tyrosine-protein kinase receptor;Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta 1 DIYET(0.003)DY(0.465)Y(0.532)RK 52.928000000000004 0.0087197 251760000.0 5657.1 6573.9 7447.7 6000.6 6835.9 5475.1 6375.5 6970.4 7140.1 7955.2 7429.9 True False 6231.404627463091 7127.905624104052 7953.145708658326 6371.243433648622 6355.7699665747505 5430.5126008636225 6618.123141307468 6831.369903826981 6840.026427366592 7452.907314357074 6516.069402016662 0.9563134219433774 1.0938965171086164 1.2205434316271866 0.9777740291834188 0.9753993664658789 0.8334031247707291 1.0156618557898143 1.0483881435812725 1.0497166321232962 1.143773470560407 1.0 12.669786254610854 DIYLS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 DIYLSPDR 8 0 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 DIYLS(1)PDR;DIYLS(1)PDR 86.898 0.002724 44793000.0 1434.3 1627.0 1440.85 1356.77 2070.05 1442.13 1747.29 1403.37 1790.24 1934.85 1750.79 True False 1676.3747747317545 1709.807350521125 1645.184195899074 1689.1787109077197 1765.5483871786544 1594.7352393915826 2064.7499757118976 1602.3019951403767 1384.7534984258302 1497.766041188315 1316.0205236541713 1.2738211483792015 1.2992254450360188 1.2501204702575 1.283550431430512 1.341581195311671 1.2117859947681584 1.5689344798200733 1.21753571949721 1.052227889714675 1.1381023428339052 1.0 10.361966273084185 -8.688027696907833 3.621662366265624 1.0232483531104493 1.3149417608745395 0.5700431439189957 0.0947555458172681 0.09011200879802375 2.34075768081718 0.014662899660390602 0.016403090926988825 2.0510313711807964e-09 8.688027696907833 0.29169340776409025 DIYLS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 DIYLSPDR 8 0 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 DIYLS(1)PDR;DIYLS(1)PDR 93.556 0.0025570999999999997 58832000.0 6384.6 5979.3 6369.4 6281.9 7247.299999999999 5460.5 6038.200000000001 6379.700000000001 6466.9 6500.1 6281.9 True False 7032.7598919058955 6483.196595355178 6801.665786313679 6669.918695769973 6738.274649827703 5416.031498423002 6267.9870052298265 6252.451878722169 6195.118682250529 6089.682576685992 5509.266124245072 1.2765329779507766 1.1767804366581696 1.2345865371035607 1.210672809290719 1.2230802611211744 0.9830767612746523 1.1377172320004274 1.1348974142320878 1.1244907293527118 1.1053527710136626 1.0 12.427644438408345 -2.000000056532291 0.05106767458629613 0.7085396036750995 1.9970644467916474 0.47114975065752296 0.06434770518975609 180.01250656649555 0.6741890680909749 3.8903782589176275 18.016867968524 0.009999998698295983 2.000000056532291 1.288524843116548 DIYLS(ph)PDRTGSSFGK ddPTM_A549_MK2206_60min_R1 2 DIYLSPDRTGSSFGK 15 1 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 DIYLS(1)PDRTGSSFGK;DIYLS(1)PDRTGSSFGK 137.14 2.528e-10 31649000.0 3922.8999999999996 4024.5 4047.3999999999996 3709.8999999999996 5103.200000000001 3779.3 3963.3 3443.7 6064.1 6170.9 6832.7 True False 4584.989614303283 4229.329859970664 4621.382180297685 4618.825666543739 4352.5260401681635 4179.223017503694 4683.380308213846 3931.8550208889433 4690.591032377822 4776.88940412382 5135.952017073353 0.8927243866495411 0.8234753451572715 0.8998102328321814 0.8993124646004207 0.8474623644650766 0.8137192488580068 0.9118816321969069 0.7655552481445209 0.9132856025104935 0.9300884019640551 1.0 12.326416008724 -9.6210104667931 1.004453789991492 0.9846600999467271 0.8593004421309215 0.3983395858176604 0.047745404349735523 0.22898143010488425 0.48120947105088 0.013061843406965418 0.0088097240110814 2.393258076559046e-10 9.6210104667931 -0.1253596578158056 DIYLS(ph)PDRTGSSFGK ddPTM_A549_PD325901_60min_R1 4 DIYLSPDRTGSSFGK 15 1 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 DIYLS(0.999)PDRT(0.001)GS(0.001)SFGK;DIYLS(0.982)PDRT(0.004)GS(0.006)S(0.008)FGK;DIYLS(0.995)PDRT(0.004)GS(0.001)SFGK;DIYLS(1)PDRTGSSFGK 103.85 1.6497e-06 54418000.0 12018.300000000001 10661.9 10932.300000000001 11563.899999999998 12181.800000000001 12384.4 11803.0 12067.599999999999 12404.000000000002 11966.7 13232.5 True False 13238.388968595162 11560.415730941299 11674.231619260368 12278.175839477604 11326.192392928562 12283.545552434727 12252.169623849419 11826.902251150945 11882.703016071942 11211.120519750195 11604.986387728697 1.140750064351101 0.9961593529455124 1.0059668515944915 1.0580086377749438 0.9759763617564484 1.0584713451644847 1.0557676859324079 1.0191224578821485 1.023930801731651 0.9660606350736454 1.0 13.502457209998513 DKAIT(ph)PPLPESTVPFSNGVLK ddPTM_A549_MK2206_60min_R1 2 DKAITPPLPESTVPFSNGVLK 21 1 Q92667;Q92667-2;I3NI36 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 DKAIT(0.995)PPLPES(0.004)T(0.001)VPFSNGVLK;DKAIT(1)PPLPESTVPFSNGVLK 113.6 3.0131e-12 71253000.0 5786.700000000001 6348.1 6631.0 5693.3 7782.3 6258.2 6319.799999999999 6305.299999999999 9772.8 7795.6 8871.8 True False 6763.3534887682135 6671.191175072619 7571.375509599729 7088.158755581945 6637.533979150468 6920.438570143053 7468.025855183777 7199.095584171395 7559.276403954751 6034.568545720663 6668.687210776325 1.0141956392614895 1.0003754808431033 1.135362219023363 1.0629016673818157 0.9953284311227683 1.0377512621914413 1.1198644679444185 1.079537149761343 1.1335479030624305 0.9049110199634266 1.0 12.703187066924837 DKAIT(ph)PPLPESTVPFSNGVLK ddPTM_A549_PD325901_60min_R1 2 DKAITPPLPESTVPFSNGVLK 21 1 Q92667;Q92667-2;I3NI36 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 DKAIT(1)PPLPESTVPFSNGVLK;DKAIT(0.922)PPLPES(0.039)T(0.039)VPFSNGVLK 83.693 3.0376e-05 87462000.0 3680.9 3163.8999999999996 2797.7 3398.2 4045.9 4169.8 3772.2000000000003 3834.9 4201.2 3813.4 4633.0 True False 4054.5822582646397 3430.532956708017 2987.5687459367878 3608.0990961278476 3761.7299415972698 4135.842531292785 3915.7531352270425 3758.409911079147 4024.638174066542 3572.6212732010845 4063.170371006768 0.9978863517997153 0.8442995600644733 0.7352802056381729 0.8880009368728087 0.9258115210820441 1.0178855803843663 0.9637186673658484 0.9249944176344966 0.9905167164007748 0.8792693751396558 1.0 11.988390143509546 -6.898391983669773 2.6356172164301377 0.9880848162618433 0.8536081136181286 0.2515691301882754 0.06965972286650157 0.17386974312634176 2.4483218319428053 0.008922022317164317 0.018260590041321276 1.2635953421071623e-07 6.898391983669773 -0.1344767026437147 DKANMQHR ddPTM_A549_MK2206_60min_R1 1 DKANMQHR 8 1 P31943;G8JLB6;E9PCY7;P55795;H0YB39;H0YBD7;H0YBG7;H0YBK1 P31943 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 72.547 0.019978 2283400.0 321.79 189.9 172.75 118.85 399.89 343.33 296.94 255.46 442.49 306.54 422.44 False True 376.1002849898426 199.56509887151918 197.24854762228216 147.96825533537927 341.06671073107975 379.66095271599096 350.89015434638264 291.6722373134388 342.266721511331 237.29240109872387 317.536489249121 1.1844317038309753 0.6284792634176659 0.6211838774457578 0.46598819457026813 1.0741024174500406 1.1956451166093565 1.1050388419174535 0.9185471502917871 1.077881544639766 0.7472917574287274 1.0 8.310778576412119 -6.788273850696338 24.99749066506427 1.048098122433013 0.7107079727154462 0.32470934504681837 0.1989141397482522 141.8986531981528 132184.49939852094 0.024504036920009863 0.0463171150616309 1.6282689801963412e-07 6.788273850696338 -0.33739014971756687 DKANMQHR ddPTM_A549_PD325901_60min_R1 2 DKANMQHR 8 1 P31943;G8JLB6;E9PCY7;P55795;H0YB39;H0YBD7;H0YBG7;H0YBK1 P31943 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 ; 51.346000000000004 0.011512999999999999 5056100.0 548.8199999999999 697.22 670.8499999999999 623.52 491.70000000000005 487.55999999999995 404.79999999999995 397.64 666.41 618.49 946.8900000000001 False True 604.5358023800701 755.9771762938027 716.3779151487624 662.0334142833369 457.16468827291305 483.5894730100028 420.20488551505923 389.70875825745463 638.4031052032003 579.4384358478364 830.4285328302609 0.7279805287032892 0.910345859284587 0.8626605262552914 0.7972190117637205 0.5505165949859736 0.5823372558765971 0.5060096912649663 0.46928632970889367 0.7687634515969715 0.697758341555291 1.0 9.697712204117831 -9.878618005597483 1.0693018637770593 0.9642717543134275 0.6856057629961146 0.05311633179524933 0.16070028356133348 0.36736758214786147 0.8545382765470473 0.05144480677714995 0.030574764658276538 1.3224583235488169e-10 9.878618005597483 -0.27866599131731284 DKAPVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A549_MK2206_60min_R1 4 DKAPVQPQQSPAAAPGGTDEKPSGK 25 2 Q13200;F8WBS8;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK 144.2 1.0143e-32 636091000.0 5050.68 5212.129999999999 5710.9 4879.0 5910.17 5693.93 5282.65 5806.12 6652.34 6646.28 7158.69 True False 5903.111306729545 5477.405154192792 6520.791494159715 6074.35521902663 5040.791822154854 6296.457893275164 6242.439125270825 6629.155290496766 5145.595611604077 5144.880731958073 5380.989703207058 1.0970307754373334 1.0179177913922175 1.211820102586953 1.128854644603079 0.936777823445853 1.1701300765401 1.160091260079971 1.231958367537073 0.9562544987843619 0.9561216459663053 1.0 12.393655830788294 -8.789973698529518 24.99941837235923 0.9793423752258821 1.116311176150698 0.40171914629260663 0.08048206180374405 159.70868122522495 139922.87270028162 0.013952775040489708 0.014855195092499532 1.6219083193807575e-09 8.789973698529518 0.136968800924816 DKAPVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_A549_PD325901_60min_R1 5 DKAPVQPQQSPAAAPGGTDEKPSGK 25 2 Q13200;F8WBS8;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(0.999)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK 138.55 5.7702e-25 1227826000.0 8662.62 8892.2 8743.43 9919.539999999999 10565.4 11301.630000000001 10382.35 10101.3 11568.6 10274.2 10412.74 True False 9542.042805316209 9641.576901178618 9336.81173831579 10532.247456890122 9823.322752651286 11209.593272323482 10777.456010689913 9899.82164718345 11082.41197289018 9625.485258594057 9132.038991797324 1.044897291162156 1.0557967294969914 1.0224235514875044 1.1533292254172927 1.0756987307516857 1.2275016874536213 1.1801806825803693 1.0840757092776072 1.2135747539891957 1.054034621100497 1.0 13.156721304228265 -6.25381594086538 24.467105137413245 1.1173957230157843 1.0425149426044065 0.23314707899002274 0.06594618560087728 706.5719966645656 2267702.331018561 0.011946534099053973 0.030949318662059067 5.574219408849786e-07 6.25381594086538 -0.0748807804113778 DKAPVQPQQSPAAAPGGTDEKPSGK ddPTM_A549_MK2206_60min_R1 1 DKAPVQPQQSPAAAPGGTDEKPSGK 25 2 Q13200;F8WBS8;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 78.236 1.579e-06 1769000.0 289.57 312.18 373.24 395.71 379.77 384.66 456.0 324.0 646.89 613.2 754.1 False True 338.4423366932123 328.0686285714104 426.1710443678183 492.6589677640972 323.90633607827715 425.3644658833569 538.8492974403937 369.9279922083854 500.37044787105924 474.6776941141044 566.8361578987833 0.5970725966878881 0.5787715268333177 0.7518416714057208 0.8691382172766553 0.5714285011015745 0.7504187232165097 0.9506261905342547 0.6526189041639107 0.8827426424699032 0.8374160460646988 1.0 9.146787979007117 -5.2945939738522725 0.0866953444719666 1.2668476723411237 1.7336428885835984e-17 0.36814089814870243 0.1156723954688368 31.503609046356846 0.4170063576360349 1.5438349829849183 5.500675743365593 5.074649204718911e-06 5.2945939738522725 -1.2668476723411237 DKAS(ph)PEPEKDFSEK ddPTM_A549_MK2206_60min_R1 7 DKASPEPEKDFSEK 14 2 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 DKAS(0.829)PEPEKDFS(0.171)EK;DKAS(1)PEPEKDFSEK;DKAS(0.982)PEPEKDFS(0.018)EK;DKAS(1)PEPEKDFSEK;DKAS(0.982)PEPEKDFS(0.018)EK;DKAS(1)PEPEKDFSEK;DKAS(0.993)PEPEKDFS(0.007)EK 121.44 6.3585e-07 324290000.0 55146.299999999996 56433.7 54646.7 48560.8 69744.8 57015.5 55940.299999999996 57938.8 76083.4 77213.6 79560.7 True False 64453.64724241075 59305.934282178234 62396.42377626955 60458.19817997716 59485.43231037782 63048.84236617415 66103.92840702823 66151.8023301333 58850.63138022374 59770.994132825814 59803.58242638602 1.0777556231141945 0.9916786231858208 1.0433559536851347 1.0109460959867567 0.9946800826455536 1.0542653100051793 1.1053506449784591 1.1061511642979163 0.9840653183722682 0.9994550779027274 1.0 15.867944288621292 -8.851469439407264 24.60821344400836 0.9924748507295937 1.0451147910205512 0.288011395163405 0.03723255867521062 16.61939530482844 4537.134946103473 0.006835034487355594 0.007276427789883894 1.4077662870892226e-09 8.851469439407264 0.05263994029095742 DKAS(ph)PEPEKDFSEK ddPTM_A549_PD325901_60min_R1 4 DKASPEPEKDFSEK 14 2 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 DKAS(0.987)PEPEKDFS(0.013)EK;DKAS(1)PEPEKDFSEK;DKAS(0.999)PEPEKDFS(0.001)EK;DKAS(0.909)PEPEKDFS(0.091)EK 119.62 5.2435e-07 405195000.0 78620.0 80053.0 80652.0 78591.0 95671.0 77035.0 82333.0 82999.0 84107.0 83818.0 103609.0 True False 86601.44452301515 86799.34725602793 86125.529719875 83445.38757688872 88951.39900703252 76407.65250087294 85466.2273693464 81343.51983354412 80572.27527997113 78525.71717553059 90865.7498315648 0.953070267769162 0.9552482361827791 0.9478327079182575 0.9183370822512225 0.9789320967682449 0.8408850710251947 0.9405769228534696 0.8952055090540522 0.8867177724205834 0.8641948954484108 1.0 16.471448979144238 -10.96023053715782 1.245283716892445 0.9996856149281907 0.9207823665007165 0.0 0.05420473638548629 0.3879128886122202 1.076463007743661 0.025696293496384037 0.00606667831240622 1.0958963055186412e-11 10.96023053715782 -0.0789032484274742 DKDAYS(ph)SFGSR ddPTM_A549_MK2206_60min_R1 1 DKDAYSSFGSR 11 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8YF89;A0A087WX09;C9J8G5;C9J081;O15523-3;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 1 DKDAYS(0.499)S(0.499)FGS(0.001)R 54.402 0.0052974 8211600.0 3399.7 3506.5 3140.5 3318.8 4750.7 3682.2 3309.5 4245.5 5286.4 5184.1 5147.9 True False 3973.4862453151677 3684.9658725275517 3585.870123344585 4131.906148986594 4051.8783232142364 4071.847959953458 3910.7933111381208 4847.312626298461 4089.038840646117 4013.0082094861855 3869.534355187836 1.0268641858646286 0.9523021465327384 0.9266929284494022 1.067804487495246 1.0471229743139336 1.0522837081144873 1.0106625118588157 1.2526862876407157 1.0567263306924757 1.0370778086272825 1.0 11.917944253130063 -6.270472562905282 24.647968426333126 1.0477769532598546 0.9669879919396144 0.2579026838526379 0.06854917689995406 646.8898697827279 1765106.5031030877 0.010112745352543166 0.02383292820167406 5.36447761125117e-07 6.270472562905282 -0.08078896132024027 DKDAYSS(ph)FGSR ddPTM_A549_PD325901_60min_R1 2 DKDAYSSFGSR 11 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8YF89;A0A087WX09;C9J8G5;C9J081;O15523-3;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 1 DKDAY(0.003)S(0.282)S(0.71)FGS(0.004)R;DKDAYS(0.285)S(0.713)FGS(0.001)R 54.812 0.0050816 45699000.0 12306.2 10945.0 12587.5 12161.7 13218.7 12217.4 12065.3 13814.4 12709.5 12149.4 13969.5 True False 13555.516364654377 11867.373561480836 13441.76344478654 12912.900587775302 12290.264114039359 12117.905545066062 12524.45159388549 13538.860954812855 12175.36391347681 11382.284810570427 12251.34005995663 1.1064517267756229 0.968659224493263 1.0971667898372028 1.053999033949027 1.0031771262484135 0.9891085779810571 1.0222923804736692 1.105092250199182 0.9937985439871881 0.9290644741609368 1.0 13.580651940378711 -2.0000000000000004 0.11953559136888728 0.9792541754551078 1.238254159254826 0.22827883294822793 0.04944140079648828 111.99578439874395 0.88788177987075 0.1618233027864525 4.8587754806635495 0.00999999999999999 2.0000000000000004 0.2589999837997181 DKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_A549_MK2206_60min_R1 2 DKDDQEWESPSPPKPTVFISGVIAR 25 2 P51397 P51397 DAP Death-associated protein 1 1 DKDDQEWES(0.163)PS(0.837)PPKPTVFISGVIAR;DKDDQEWES(0.21)PS(0.79)PPKPTVFISGVIAR 166.28 6.0023e-42 114590000.0 10079.900000000001 10211.9 9228.0 7937.200000000001 16989.0 14937.0 11386.5 14340.7 18833.1 14114.1 13788.5 True False 11781.140690105714 10731.642091448477 10536.669160396063 9881.814356314451 14489.940605192207 16517.623425621867 13455.279660756678 16373.538141551835 14567.432920280797 10925.715007331832 10364.434906759552 1.1366891486213304 1.0354295422753281 1.0166178142065596 0.9534349383457132 1.3980444409701538 1.5936829720305623 1.2982164277939858 1.5797810771982583 1.4055211935172753 1.054154433466143 1.0 13.339353839031983 -6.755540789391929 24.998274239166502 1.2765430151831176 1.0341829639502256 0.3554275805593663 0.1828236741506007 181.5188720374643 769270.4416177638 0.03239417027664036 0.06605675837655603 1.755735985895129e-07 6.755540789391929 -0.24236005123289206 DKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_A549_PD325901_60min_R1 3 DKDDQEWESPSPPKPTVFISGVIAR 25 2 P51397 P51397 DAP Death-associated protein 1 1 DKDDQEWES(0.25)PS(0.75)PPKPTVFISGVIAR;DKDDQEWES(0.024)PS(0.965)PPKPT(0.005)VFIS(0.006)GVIAR;DKDDQEWES(0.164)PS(0.836)PPKPTVFISGVIAR 264.31 3.973999999999999e-138 130012400.0 23840.3 25971.100000000002 26438.4 24490.4 24723.9 23418.7 22477.5 21880.7 28697.9 29668.8 29303.4 True False 26260.549705698733 28159.77574258338 28232.668811014457 26003.116386266098 22987.37855682464 23227.985871645244 23332.893562659956 21444.272273422906 27491.82706263549 27795.50690469091 25699.267569557458 1.0218403942689072 1.0957423462114757 1.0985787332109802 1.011823248109552 0.894476019388769 0.90383843853824 0.9079205661993016 0.83443126211212 1.0697513844791997 1.0815680575121367 1.0 14.64943962267192 -6.402529403899936 5.5015378036217 0.9896179260539881 1.0735801193965449 0.23850558550509482 0.0774774572970529 0.34240911787399403 14.071585891317632 0.012558088212303684 0.029579519584181747 3.9579526661727544e-07 6.402529403899936 0.08396219334255672 DKDEKYS(ph)PK ddPTM_A549_MK2206_60min_R1 4 DKDEKYSPK 9 2 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 DKDEKY(0.002)S(0.998)PK;DKDEKYS(1)PK;DKDEKYS(1)PK;DKDEKY(0.001)S(0.999)PK 87.618 0.00023456 81285000.0 17607.8 17185.6 15644.8 14462.1 19348.800000000003 16141.3 15019.8 18176.0 21871.7 22915.9 22590.600000000002 True False 20579.566170621078 18060.273634367448 17863.467889094525 18005.315149228347 16502.61715120038 17849.36165227221 17748.703240559702 20752.50366166547 16917.7948719279 17739.182274216244 16980.73055115802 1.211936442229079 1.063574595919597 1.0519846502055417 1.0603380752661702 0.971843767350455 1.0511539299500252 1.0452261277621715 1.2221207797358418 0.996293700142022 1.0446654353753055 1.0 14.051610907925706 -2.000000003811701 0.8912205362701361 1.022281948701438 89.54315352083238 0.27557194674387 0.06547178034890579 664.8391106148063 1.4382399612812502 0.010347394675457608 119687.26080809154 0.009999999912232337 2.000000003811701 88.52087157213094 DKDEKYS(ph)PK ddPTM_A549_PD325901_60min_R1 4 DKDEKYSPK 9 2 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 DKDEKY(0.02)S(0.98)PK;DKDEKY(0.027)S(0.973)PK;DKDEKY(0.002)S(0.998)PK;DKDEKY(0.024)S(0.976)PK 51.773999999999994 0.006254699999999999 137486000.0 21078.6 19620.0 20216.7 19190.9 23997.4 21397.1 18995.699999999997 19065.4 22221.2 22630.3 23338.2 True False 23218.483954754825 21273.446256395982 21588.726834893023 20376.278307303837 22311.905410535688 21222.849111785905 19718.591758345876 18685.12564048304 21287.320240304543 21201.418995888827 20467.749353039086 1.1343936040191593 1.0393642158431682 1.0547679895096767 0.9955309670761789 1.0901005785095164 1.0368921734247591 0.9633981449659499 0.9129057288220427 1.0400420619350494 1.0358451547453997 1.0 14.321064850952116 -7.529777197922123 24.683632670827198 1.0057144489028684 1.0579564019746777 0.33494756827123784 0.046369750820338 177.64027116052924 635618.9673209112 0.007314850045495535 0.01086482826417344 2.9527236466484267e-08 7.529777197922123 0.05224195307180923 DKDLIES(ph)LSEDR ddPTM_A549_PD325901_60min_R1 1 DKDLIESLSEDR 12 1 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 DKDLIES(0.797)LS(0.203)EDR 98.507 6.9971e-05 3418900.0 786.75 823.23 1078.3 844.24 1129.9 973.91 914.99 945.59 793.8 789.87 1128.4 True False 866.6202808252616 892.6064812259366 1151.4799223446541 896.386787391847 1050.5397219433885 965.9787998588309 949.8104451517403 926.7294656489951 760.4393465138583 739.9974733999429 989.6139535169518 0.875715502742673 0.9019744295780552 1.1635647600283454 0.905794410240692 1.0615651873237184 0.9761167942568667 0.959778751882231 0.9364555363791366 0.7684201943711095 0.7477637828065112 1.0 9.950722032174484 -8.352464110762341 3.401420976845933 0.8895419257193633 0.9830363221750329 0.22374397912281652 0.1004708506142771 0.3908418729342859 8.653854251324363 0.018145076819981548 0.022273683927475238 4.4415636405315845e-09 8.352464110762341 0.09349439645566959 DKDLIESLS(ph)EDR ddPTM_A549_PD325901_60min_R1 1 DKDLIESLSEDR 12 1 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 DKDLIES(0.359)LS(0.641)EDR 62.378 0.0021241 4381600.0 679.67 636.35 617.29 703.1 657.92 793.83 543.21 551.88 691.92 598.86 663.34 True False 748.6695980533915 689.9774477705189 659.1830114663185 746.5288901440438 611.7099689007829 787.3653116734974 563.8821538059177 540.8723204585151 662.8410086166152 561.0478773979131 581.7533852587154 1.286919194669483 1.1860308255252772 1.1330969929348478 1.283239443139725 1.0514936129314405 1.3534348602429584 0.9692803997266813 0.9297278437287996 1.139384875812693 0.9644084445652272 1.0 9.184263890560915 -7.7774650467374356 24.99977542903812 1.048538192497106 1.2062048325518848 0.5284300770519899 0.09624674933044394 186.72499694776118 291287.2379634502 0.014886441355457624 0.02060327383452771 1.6693021520183807e-08 7.7774650467374356 0.15766664005477882 DKDPVNKS(ph)GGK ddPTM_A549_PD325901_60min_R1 1 DKDPVNKSGGK 11 2 P62851;E9PQK3;E9PK60 P62851 RPS25 40S ribosomal protein S25 1 DKDPVNKS(1)GGK 46.797 0.0068569 12893000.0 5346.5 5281.9 6168.6 5254.0 6892.2 4705.0 4120.5 4675.0 5367.8 6163.6 7110.1 True False 5889.272744114728 5727.024249829662 6587.238290805186 5578.52764730025 6408.115648799212 4666.684039937781 4277.307882324116 4581.753457533447 5142.210033027327 5774.429244113445 6235.602774637435 0.9444592538942085 0.9184395569781394 1.056391583761234 0.8946252429661236 1.027665789563032 0.7483934125693441 0.6859493840309315 0.7347731443332437 0.824653240251712 0.9260418684141078 1.0 12.606313311909853 -7.23556355182917 24.880370969171132 0.8702464161449193 0.9663444736397259 0.29147409702739446 0.09953561092545836 1244.7637657116072 1196877.6310729769 0.018329080770583157 0.031739925734733096 5.813483553474468e-08 7.23556355182917 0.0960980574948066 DKDQPPSPS(ph)PPPQSEALSSTSR ddPTM_A549_MK2206_60min_R1 2 DKDQPPSPSPPPQSEALSSTSR 22 1 H3BU99;H3BPL8;H3BR21;H3BUX9;Q7L1V2 H3BU99 MON1B Vacuolar fusion protein MON1 homolog B 1 DKDQPPS(0.148)PS(0.851)PPPQS(0.001)EALSSTSR;DKDQPPS(0.048)PS(0.949)PPPQS(0.003)EALSSTSR 76.611 4.7011e-05 15800000.0 2448.6 3304.8 2439.8 2569.4 3253.7 2669.3 2392.67 2637.0 3759.3 4004.1000000000004 4091.9 True False 2861.863817477639 3473.0002040579066 2785.800326997648 3198.903115344751 2775.0850401503276 2951.7635542620624 2827.387167777865 3010.802825473805 2907.824552368523 3099.5710290317766 3075.7682993051735 0.9304549429565756 1.1291488389559348 0.9057250273458406 1.0400338400221478 0.9022412516499467 0.9596833269036799 0.9192458249916229 0.9788782939709586 0.9453977898872976 1.0077387915507094 1.0 11.586731112398219 -5.786342164312746 24.999268960015318 0.9655777680263155 1.0298022262512596 0.16068122850927435 0.059241580051595515 241.942614952655 242880.1686260823 0.0071341959832664425 0.022192742414754774 1.6355274430346826e-06 5.786342164312746 0.06422445822494416 DKDQPPSPS(ph)PPPQSEALSSTSR ddPTM_A549_PD325901_60min_R1 2 DKDQPPSPSPPPQSEALSSTSR 22 1 H3BU99;H3BPL8;H3BR21;H3BUX9;Q7L1V2 H3BU99 MON1B Vacuolar fusion protein MON1 homolog B 1 DKDQPPS(0.484)PS(0.516)PPPQSEALSSTSR;DKDQPPS(0.26)PS(0.74)PPPQSEALSSTSR 112.6 2.0175e-11 26922000.0 6450.299999999999 7031.2 5922.5 6531.4 6996.6 6548.1 6773.0 7054.1 6725.5 7695.6 8848.900000000001 True False 7105.12970754011 7623.743899998544 6324.436464885667 6934.8297441143595 6505.182952959659 6494.7744446156385 7030.75022132781 6913.400441665603 6442.850623556253 7209.698502660689 7760.541397798794 0.9155456228292803 0.9823726862871899 0.8149478419997264 0.8936012822612299 0.8382382902827881 0.8368970812342836 0.905961306168925 0.8908399668644928 0.8302063339786716 0.9290200429451551 1.0 12.921941587161335 -10.918910622451763 1.1343353762242092 1.001049390571788 0.8750338315792882 0.2691220887554464 0.04996767961449641 0.3440727490535813 0.7756431885290821 0.0345166058399534 0.007887116388601758 1.2052839615780511e-11 10.918910622451763 -0.12601555899249994 DKDS(ph)PPR ddPTM_A549_PD325901_60min_R1 3 DKDSPPR 7 1 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 DKDS(1)PPR;DKDS(1)PPR;DKDS(1)PPR 56.258 0.024630000000000003 93078900.0 17064.4 18322.2 15881.3 15789.400000000001 17059.5 14502.4 12048.7 13639.0 17102.1 19756.0 22267.699999999997 True False 18796.765325852666 19866.276095766483 16959.100520014967 16764.675377670836 15861.29957208004 14384.297262655395 12507.219871801617 13366.959445411481 16383.358211154773 18508.60278841995 19528.914066580484 0.9625095006188422 1.0172750019809509 0.8684098082564049 0.8584540502618092 0.8121956765237257 0.736564112761959 0.6404462546744993 0.6844701860963249 0.8389282760576713 0.9477538139252414 1.0 14.253324107866998 -5.7732103926507445 20.605463940183025 0.8605742144540006 0.9898920886379629 0.20495812535287572 0.10713705857009266 37.50515470323167 65660.55643813948 0.018708508408042272 0.05922757681785149 1.6857361777424867e-06 5.7732103926507445 0.12931787418396223 DKDVTLS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 DKDVTLSPVK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DKDVT(0.051)LS(0.949)PVK;DKDVT(0.02)LS(0.98)PVK 105.14 9.1214e-05 136910000.0 7911.799999999999 8253.7 8466.1 7045.9 9176.2 7638.0 7701.700000000001 8656.0 9316.4 8988.2 10052.6 True False 9247.118415061497 8673.77807559694 9666.720283791621 8772.145816302474 7826.393135638641 8446.248090305933 9100.999197580442 9883.014507888229 7206.250275233707 6957.759377423992 7556.26198235421 1.2237689001064105 1.1478927141293425 1.279299249597998 1.1609107567720205 1.0357493101635777 1.117781266720247 1.2044313999214937 1.3079237499927314 0.9536792519981614 0.9207938255280358 1.0 12.88345700678157 -8.781357895853832 24.99869387153757 0.9781262852116615 1.1793112315433714 0.6511594391557413 0.07338016369217835 114.81931281684555 144103.15117076927 0.012905634139971351 0.013747691307187197 1.654406029266385e-09 8.781357895853832 0.2011849463317099 DKDVTLS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 DKDVTLSPVK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DKDVT(0.003)LS(0.997)PVK 80.469 0.00033096 99328000.0 3598.4 3183.6 3149.3 3031.9 4190.5 3971.6 3387.9 3516.8 3170.8 2967.7 3509.2 True False 3963.7069189979297 3451.8931448451735 3363.030436279345 3219.1735770555065 3896.173736440191 3939.2566063797826 3516.828388430017 3446.65466512377 3037.5423027540223 2780.3189155291484 3077.5906466516194 1.2879253201885033 1.1216219248004249 1.092747809049355 1.0460044712437397 1.265981796727638 1.2799806922553671 1.142721301241373 1.1199197881868037 0.9869871115116725 0.903407644078364 1.0 11.58758563480767 -8.617554161503984 2.7462656355646344 0.993180261696329 1.172968901508075 0.5764730451914861 0.0785775178681098 0.15483173960447025 2.3434327329787 0.013452219591186415 0.015299878725014301 2.412380662288371e-09 8.617554161503984 0.1797886398117461 DKDVTLS(ph)PVKAGPATTTSSETR ddPTM_A549_MK2206_60min_R1 1 DKDVTLSPVKAGPATTTSSETR 22 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DKDVT(0.006)LS(0.994)PVKAGPATTTSSETR 100.98 1.7657e-10 9812200.0 1408.2 2143.9 2222.9 2657.1 2374.1 1572.9 2508.4 2126.4 4342.0 3591.8 3753.9 True False 1645.8697328154894 2253.015352662718 2538.140645496792 3308.0896192817504 2024.873034951253 1739.3432339934802 2964.1438107444833 2427.8237118268858 3358.543932749214 2780.4098853865603 2821.703027630609 0.5832894945707771 0.7984594163881876 0.8995066527706407 1.1723734166524113 0.717606713081902 0.6164161206766011 1.0504804303355346 0.8604107831523061 1.1902542187685115 0.9853658794565909 1.0 11.46235044300492 -8.334291568420195 1.8094611429149705 1.0860460753456809 0.8247938822145076 0.22957514755148012 0.17236223064141917 0.3211911759386808 2.0475051885991573 0.03116471019874809 0.03917094863720146 4.631358839237773e-09 8.334291568420195 -0.2612521931311733 DKDVTLS(ph)PVKAGPATTTSSETR ddPTM_A549_PD325901_60min_R1 1 DKDVTLSPVKAGPATTTSSETR 22 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DKDVT(0.013)LS(0.987)PVKAGPATTTSSETR 83.557 1.1334e-05 15583000.0 2460.8 2948.9 2968.5 3847.9 3475.7 4202.4 3123.8 3842.7 3950.4 4150.3 3971.0 True False 2710.618604454788 3197.414152165451 3169.960261040622 4085.5760437850463 3231.5788225140627 4168.177047701281 3242.6779184089514 3766.0543339601677 3784.3784258860524 3888.2493497053697 3482.592174243013 0.778333628755706 0.9181132880884771 0.9102301109172091 1.1731422570812788 0.9279234147525439 1.1968605105498145 0.931110436183585 1.0813940150137646 1.086655639404185 1.1164813894841223 1.0 11.765945822000743 -5.670062173228403 1.5339961994936977 1.0464687651350129 0.7793661397007132 0.4899351601819971 0.08851346746320561 0.33657294167078333 1.2038319294903717 0.011119342227019772 0.10733033066170616 2.137656042576342e-06 5.670062173228403 -0.26710262543429963 DKEADEEGGENGPADQGFQPQEEEEREDS(ph)DTEEQVPEALER ddPTM_A549_PD325901_60min_R1 2 DKEADEEGGENGPADQGFQPQEEEEREDSDTEEQVPEALER 41 2 Q9NU22 Q9NU22 MDN1 Midasin 1 DKEADEEGGENGPADQGFQPQEEEEREDS(0.96)DT(0.04)EEQVPEALER;DKEADEEGGENGPADQGFQPQEEEEREDS(0.874)DT(0.126)EEQVPEALER 148.01 6.6559e-41 48934000.0 698.5 941.62 824.23 987.03 898.97 803.6700000000001 923.4200000000001 615.35 707.9300000000001 570.29 717.24 True False 769.4112057914781 1020.9736220156778 880.1672042976292 1047.9966013922276 835.8294484781387 797.1251779759391 958.5612534148132 603.0763615172635 678.1781639928901 534.2817920736995 629.0240269589672 1.223182538052189 1.6231075098221623 1.3992584807178514 1.6660676802105543 1.3287718952787506 1.2672412242019773 1.523886548577488 0.9587493254158378 1.0781434967938504 0.8493821685265325 1.0 9.296971314848312 -8.262545785885166 24.999997941347374 1.0320707689411999 1.4376536364793457 0.7016194111562042 0.14278792931600948 40.56507353803703 916591.0393777095 0.0202559828266981 0.025195721247772078 5.463289496262464e-09 8.262545785885166 0.4055828675381459 DKEADEEGGENGPADQGFQPQEEEEREDSDT(ph)EEQVPEALER ddPTM_A549_MK2206_60min_R1 2 DKEADEEGGENGPADQGFQPQEEEEREDSDTEEQVPEALER 41 2 Q9NU22 Q9NU22 MDN1 Midasin 1 DKEADEEGGENGPADQGFQPQEEEEREDS(0.433)DT(0.567)EEQVPEALER;DKEADEEGGENGPADQGFQPQEEEEREDS(0.474)DT(0.526)EEQVPEALER 96.28 2.1868000000000001e-10 30378000.0 221.66 0.0 397.55 328.83 218.14 430.78 170.28 554.27 409.34 325.15 501.64 True False 259.070788933306 0.0 453.92856791454875 409.3933647617398 186.0518949683106 476.3648536713785 201.21767185997868 632.8394698806848 316.6251435816588 251.6983891735177 377.0689434403206 0.6870647753951383 0.0 1.2038344069733573 1.0857254936630316 0.4934161197970879 1.2633362199631104 0.5336362894915152 1.6783123640646513 0.839700932919106 0.6675129138906516 1.0 8.558684520339874 -5.767383784042209 24.999999459834473 0.9657304377491681 0.34353235861737447 0.3140282873496998 0.35919632530117157 97.69185544472924 410864.508571386 0.042402789386988646 0.1370120400848649 1.7085048498914663e-06 5.767383784042209 -0.6221980791317936 DKEAIQAYSES(ph)LMTSAPK ddPTM_A549_PD325901_60min_R1 2 DKEAIQAYSESLMTSAPK 18 1 Q8WTV0-3;Q8WTV0-4;B7ZKQ9;Q8WTV0-2 Q8WTV0-3 SCARB1 1 DKEAIQAYS(0.006)ES(0.953)LMT(0.036)S(0.006)APK;DKEAIQAY(0.001)S(0.105)ES(0.888)LMT(0.006)S(0.001)APK 101.6 1.6914000000000002e-09 7237400.0 2945.7 3442.7 3129.3999999999996 3511.6 4709.9 3391.2 3476.2 4031.4 4261.6 3910.6 3868.5 True False 3244.745295490273 3732.8284111567023 3341.7799026109233 3728.503556577759 4379.092872272916 3363.583191548775 3608.4886932496283 3950.9905644278824 4082.499772113203 3663.6840486128267 3392.6990244419767 0.956390552805951 1.1002533334859166 0.9849915593855461 1.0989785800970113 1.2907401572390227 0.9914180914123408 1.0636041297070684 1.164556754361001 1.203319169399261 1.0798729926287585 1.0 11.728217734986645 -6.334357833245536 7.800360243622701 1.1072184150408764 1.0226760004959836 0.19282545125378203 0.0882335357390617 0.489195124619292 47.39997649495088 0.014225927467733369 0.033204557557568716 4.630652238566148e-07 6.334357833245536 -0.08454241454489275 DKEDPQEMPHS(ph)PLGSMPEIR ddPTM_A549_MK2206_60min_R1 1 DKEDPQEMPHSPLGSMPEIR 20 1 G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58-7;Q9HB58;Q9HB58-6 G5E9C0 SP110 Sp110 nuclear body protein 1 DKEDPQEMPHS(0.988)PLGS(0.012)MPEIR 53.475 0.004358699999999999 3531000.0 1193.8 1268.1 1006.7 1241.5 1740.3 1246.7 996.6 1045.7 1925.6 1439.7 1975.3 True False 1395.284254392226 1332.640873506969 1149.4651976344512 1545.6675557330523 1484.3041753614705 1378.624966507516 1177.6693198006496 1193.93117732194 1489.4546745513328 1114.470770084925 1484.7784944933912 0.9397255277921434 0.8975351397190516 0.774166114270567 1.0410088518021245 0.9996805455267033 0.9285054785076915 0.793161622537153 0.8041140020210968 1.0031494125725045 0.7505973276270979 1.0 10.536032004420958 -8.814159829830292 24.99581591021502 1.0014873472918162 0.8989249415418803 0.0 0.10936664818889213 99.97590267773171 47400.05758285691 0.014251170377262645 0.015171534219987206 1.534052314230078e-09 8.814159829830292 -0.10256240574993591 DKEDTQVDSEARPMKDETFGEYS(ph)DNEEK ddPTM_A549_PD325901_60min_R1 4 DKEDTQVDSEARPMKDETFGEYSDNEEK 28 3 H3BLW5;P32004-3;P32004-2 H3BLW5 L1CAM 1 DKEDTQVDSEARPMKDETFGEYS(1)DNEEK;DKEDTQVDS(0.001)EARPMKDET(0.016)FGEY(0.106)S(0.876)DNEEK;DKEDTQVDSEARPMKDET(0.006)FGEYS(0.994)DNEEK;DKEDTQVDSEARPMKDETFGEYS(1)DNEEK 126.66 1.9202000000000004e-22 68671300.0 10282.199999999999 10737.0 10630.9 11369.6 11021.0 10302.5 9581.500000000002 11516.300000000001 11519.2 12063.900000000001 12600.7 True False 11326.041374644432 11641.844671504772 11352.376802794937 12071.874369764915 10246.922980385953 10218.59985578299 9946.129225697985 11286.59836213742 11035.088083097051 11302.183295161947 11050.893782418518 1.0248982206908606 1.05347539309684 1.0272813245980217 1.0923889603364692 0.9272483458929225 0.9246853745024977 0.9000293932353088 1.021329005993515 0.9985697356582494 1.0227392931007282 1.0 13.431875437249111 -6.7549055300624925 24.999998635027875 0.9834649108405986 1.048206307214626 0.4229811369325781 0.04265672680027416 147.34430316856185 563767.2554446063 0.006466784558489368 0.013218500131447116 1.7583060480085827e-07 6.7549055300624925 0.06474139637402732 DKEEKES(ph)SREK ddPTM_A549_MK2206_60min_R1 2 DKEEKESSREK 11 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 DKEEKES(0.5)S(0.5)REK;DKEEKES(0.5)S(0.5)REK 47.532 0.0055893 38713000.0 10167.6 6758.299999999999 4453.4 3430.3999999999996 1345.8400000000001 1091.71 1302.28 1447.74 1829.51 11123.5 12280.2 True False 11883.642306046564 7102.26860296676 5084.959085273931 4270.848153996509 1147.8687188234674 1207.2340275815525 1538.8874190146405 1652.9615785178032 1415.1289061271343 8610.693624393736 9230.687423721842 1.2874059927007087 0.7694192509124205 0.5508754496665277 0.4626793171460777 0.12435354661382772 0.1307848453928897 0.16671428122025567 0.1790724246896147 0.15330699016959562 0.9328334098135758 1.0 13.172222376288852 -5.2996726114697035 1.6360282937233845 0.4577467552404181 1.5461409819191458 0.42802221970978993 0.3007581336616806 0.919754479498018 2.4587584253452603 0.054664546124636525 1.5403831797136824 5.015651910279442e-06 5.2996726114697035 1.0883942266787279 DKEEKES(ph)SREK ddPTM_A549_PD325901_60min_R1 2 DKEEKESSREK 11 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 DKEEKES(0.5)S(0.5)REK;DKEEKES(0.5)S(0.5)REK 64.39399999999999 0.0018349 158633000.0 9164.5 8473.1 8035.799999999999 5871.5 6897.9 4614.3 3804.6 5413.8 6255.4 8553.1 11357.0 True False 10094.873293451681 9187.157873347034 8581.157711190914 6234.169219855999 6413.415300463137 4576.722670666287 3949.386134957003 5305.817511956064 5992.507291739467 8013.055806318825 9960.160997954647 1.0135251122471511 0.9223904990324603 0.8615480927419832 0.6259104869023911 0.6439067904404511 0.45950288068698214 0.39651830284350054 0.5327039907332454 0.601647633303322 0.8045106708580648 1.0 13.281953347143547 -5.956675331806844 2.7538272227450196 0.7116395808884093 0.9735024827813328 0.3250963052130983 0.16956487313795032 0.3846231594320497 5.823922985036535 0.03271892970041875 0.12192491993693996 1.1049043113320588e-06 5.956675331806844 0.2618629018929235 DKEGDRAS(ph)EEGK ddPTM_A549_PD325901_60min_R1 2 DKEGDRASEEGK 12 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DKEGDRAS(1)EEGK;DKEGDRAS(1)EEGK 85.734 0.00038108 24224000.0 3853.2 3686.5 3328.8999999999996 3842.0 3953.0 3140.3 3215.2 3529.5 3594.8 4378.4 4154.9 True False 4244.374027424081 3997.1742927728733 3554.8191723018813 4079.3116141849164 3675.354917109673 3114.7264379631456 3337.5561954249506 3459.1013536608157 3443.7230572537387 4101.947076777582 3643.8736400811586 1.1647972588120667 1.0969574380421836 0.9755604950732337 1.1194986481732279 1.0086395084292257 0.8547844260301443 0.9159363153302469 0.9492923452701758 0.9450720297691327 1.1257105712058173 1.0 11.831257215813833 -5.426213060113249 0.7075152569546926 0.9624037018189465 1.2520385097723987 0.3560876553004315 0.07606361452973544 1.4593854639282078 0.5785189983108642 0.010146198883664683 0.32073287728244365 3.7478908971645553e-06 5.426213060113249 0.2896348079534522 DKEGDRAS(ph)EEGKQK ddPTM_A549_MK2206_60min_R1 1 DKEGDRASEEGKQK 14 3 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DKEGDRAS(1)EEGKQK 55.864 0.0044654 11443000.0 1914.1 2064.9 2256.3 1958.8 694.3 346.16 407.14 378.74 538.48 3196.1 3143.3 True False 2237.1532847479975 2169.9945900990006 2576.277267728829 2438.7060879338746 592.1693897336485 382.79042143758863 481.11206789447823 432.427554842605 416.515139775863 2474.098790212146 2362.731859333306 0.9468502639902848 0.9184260928835614 1.0903807207542286 1.0321552478756546 0.2506291128188966 0.162011791530843 0.20362533564440696 0.1830201565761353 0.17628540375012822 1.0471348157595268 1.0 11.206240195327918 -6.74731899619293 24.975882061001407 0.48307026626201516 0.9980175724294061 0.43707112872427645 0.3050154276834499 232.33336388855932 410944.61732072674 0.05352862923645077 0.11100325045328568 1.7892911085131004e-07 6.74731899619293 0.514947306167391 DKEGDRAS(ph)EEGKQK ddPTM_A549_PD325901_60min_R1 3 DKEGDRASEEGKQK 14 3 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DKEGDRAS(1)EEGKQK;DKEGDRAS(1)EEGKQK;DKEGDRAS(1)EEGKQK 90.654 1.1892e-05 84067000.0 9090.6 9602.5 9632.5 9363.0 11223.8 11217.3 9195.1 11013.8 10448.8 10890.0 13313.7 True False 10013.471019853985 10411.736374976683 10286.219374928012 9941.331245084173 10435.479008007971 11125.950027883968 9545.024562251783 10794.121118841047 10009.673272680786 10202.403541500968 11676.19930249791 0.857596788169913 0.8917059485914464 0.8809561320803648 0.8514184271381362 0.8937393699485321 0.9528742820879885 0.8174770158479395 0.9244550250638358 0.8572715327443409 0.8737777830940544 1.0 13.5112831212535 -10.827033732499336 0.870293084266476 1.0067548173276115 0.8804396960239494 0.0 0.05075024276934681 0.3432219585369971 0.4194569363932188 0.029729706361392716 0.005928768469485235 1.4892454006240665e-11 10.827033732499336 -0.12631512130366207 DKEGT(ph)PPLTK ddPTM_A549_MK2206_60min_R1 2 DKEGTPPLTK 10 1 Q03164-2;Q03164;Q03164-3;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 DKEGT(1)PPLTK;DKEGT(1)PPLTK 69.108 0.0014914000000000001 25746000.0 6344.0 7484.4 6901.0 6463.900000000001 9127.599999999999 7984.8 7313.3 7408.299999999999 10703.3 9956.5 9817.900000000001 True False 7414.712104091375 7865.323991542911 7879.665569559298 8047.5557901755 7784.942131258602 8829.746236118726 8642.031945111477 8458.449211967225 8279.01963965791 7707.319734910434 7379.844469744685 1.0047247112713062 1.065784519414814 1.0677278636241916 1.0904776954539146 1.0548924388819718 1.1964677944526116 1.1710317176115854 1.1461554842577673 1.1218420216848193 1.044374277331766 1.0 12.849374696463684 -3.978612139011684 13.650836577112958 1.0790805967791424 0.5623083239905169 0.0 0.062209353988561464 0.0 0.0 0.009568229405499213 0.0 0.00010504801757601439 3.978612139011684 -0.5167722727886255 DKEGT(ph)PPLTK ddPTM_A549_PD325901_60min_R1 2 DKEGTPPLTK 10 1 Q03164-2;Q03164;Q03164-3;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 DKEGT(0.982)PPLT(0.018)K;DKEGT(1)PPLTK 87.66 0.00028514 80528000.0 19727.3 19657.3 20617.0 19845.2 23980.0 20518.4 22483.0 21949.0 23304.0 22992.0 24854.0 True False 21730.0009735293 21313.889658300362 22016.19360009249 21070.992932280707 22295.72752650897 20351.30495325384 23338.60286816968 21511.209976342594 22324.61392184297 21540.281196160726 21797.115562486975 0.9969209417289514 0.9778307408243387 1.0100507811218173 0.9666872147314789 1.02287513513394 0.933669636008106 1.0707197840587503 0.9868833293412259 1.0242003744873394 0.988217048003899 1.0 14.41184961367905 -7.755713283470755 24.999999364305722 1.0135295311873378 0.9864339776127109 0.18629986093214013 0.03039453092424933 178.97331819760495 781389.0967605199 0.004079288839940012 0.0059594508881301205 1.755038777116308e-08 7.755713283470755 -0.027095553574626896 DKEGT(ph)PPLTKEDK ddPTM_A549_MK2206_60min_R1 1 DKEGTPPLTKEDK 13 2 Q03164-2;Q03164;Q03164-3;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 DKEGT(0.995)PPLT(0.005)KEDK 51.193000000000005 0.009218200000000001 29465000.0 3035.6 3632.6 3324.3 2682.3 4235.5 2910.3 3725.7 3429.5 5438.2 5576.5 4849.7 True False 3547.9350667055114 3817.4838239109044 3795.7357271244705 3339.463620413022 3612.463560732921 3218.2660142992104 4402.6114637580595 3915.642127403263 4206.4563830209045 4316.7647769525465 3645.385645089154 0.9732674158864585 1.0472098690171754 1.0412439441730559 0.9160796539899004 0.9909688335991053 0.8828327994967189 1.2077217316332485 1.0741365958573361 1.1539125877361127 1.1841723200857595 1.0 11.831855729894011 -7.752191120766602 24.999885239805245 1.083866779871933 0.9795595592778292 0.4676766613504093 0.07346804347218336 194.63916891673426 526146.4606043359 0.012013362641152554 0.0176840728715231 1.7693301546094835e-08 7.752191120766602 -0.1043072205941038 DKEGT(ph)PPLTKEDK ddPTM_A549_PD325901_60min_R1 2 DKEGTPPLTKEDK 13 2 Q03164-2;Q03164;Q03164-3;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 DKEGT(0.947)PPLT(0.053)KEDK;DKEGT(0.987)PPLT(0.013)KEDK 70.783 0.00089665 47512000.0 7968.7 8826.900000000001 8980.9 8589.8 9990.5 10972.0 9380.7 11046.8 9570.0 9850.8 10734.8 True False 8777.676557753113 9570.773841008242 9590.3978805389 9120.37243714878 9288.801745353954 10882.647669754999 9737.687671816007 10826.462907953044 9167.806180571468 9228.81880685196 9414.487653503873 0.9323583906858965 1.016600604648539 1.0186850557894733 0.9687592966096643 0.9866497346668525 1.155946884236946 1.0343300698038354 1.1499789798889017 0.973797674179264 0.9802783907648112 1.0 13.200666868629392 -5.259749836840118 22.542375950843486 1.0130556266032715 0.9323583111599065 0.11769617533434307 0.06403705994637528 67.72239360882605 903211.094723817 0.009018111291925672 0.07923510926858603 5.4985751265709705e-06 5.259749836840118 -0.080697315443365 DKEIS(ph)PSVTK ddPTM_A549_MK2206_60min_R1 2 DKEISPSVTK 10 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 DKEIS(0.951)PS(0.047)VT(0.002)K;DKEIS(0.843)PS(0.156)VT(0.001)K 72.417 0.00059847 32216000.0 15118.3 17112.5 13644.6 13373.0 18350.9 15070.099999999999 15406.0 15411.2 21976.0 20263.0 19630.0 True False 17669.89943305242 17983.453156602794 15579.60945231254 16649.38560033679 15651.50691929023 16664.807979277233 18205.070781505932 17595.784794820593 16998.47108846078 15685.574226735314 14755.329239561217 1.1975266119902501 1.2187768137620745 1.0558632206281988 1.1283642221752213 1.0607358646614424 1.1294094295501331 1.2337963108742738 1.1925037055522756 1.1520224870947215 1.0630446784392973 1.0 13.848948491914278 -10.533722463209697 0.8550310547310219 1.0004983038809 1.1501080745733872 0.3752205092685297 0.05802872956615724 0.42201888033749885 0.5564256582429112 0.038718193343821095 0.011102877820566391 2.926021660712187e-11 10.533722463209697 0.14960977069248704 DKEIS(ph)PSVTK ddPTM_A549_PD325901_60min_R1 1 DKEISPSVTK 10 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 DKEIS(0.828)PS(0.172)VTK 98.682 0.00013646 60473000.0 13699.0 13568.0 14675.0 13574.0 16530.0 13931.0 13083.0 12781.0 12627.0 14725.0 15038.0 True False 15089.712395329205 14711.422976900138 15670.933747943798 14412.435151209289 15368.98982540421 13817.550554808322 13580.8807242923 12526.07292849946 12096.331101575319 13795.26098701578 13188.421333736196 1.144163657914801 1.1154802083300204 1.1882342360307594 1.0928097295725643 1.1653396139301437 1.0477031484778851 1.0297578747770353 0.9497780372285772 0.9171932557714627 1.0460130623615487 1.0 13.68698426253951 -7.67857290906647 1.5759362252635327 0.9595169245847357 1.1408506001382137 0.7457305983317876 0.041930842543945246 0.10990805053813678 0.5552014932230239 0.006330383168596028 0.01025189609171801 2.0961728466593752e-08 7.67857290906647 0.181333675553478 DKEIS(ph)PSVTKK ddPTM_A549_PD325901_60min_R1 1 DKEISPSVTKK 11 2 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 DKEIS(0.798)PS(0.101)VT(0.101)KK 57.678999999999995 0.0026295999999999997 8316200.0 1950.6 2077.9 2021.7 1736.4 2523.4 1855.7 1776.2 1978.6 2162.7 1694.7 1973.5 True False 2148.623476044175 2253.011925390683 2158.9047194697087 1843.6534843494778 2346.1650892574116 1840.587794455375 1843.7942629739355 1939.1352708183267 2071.809239991838 1587.6963527806877 1730.772011047239 1.241424903066295 1.301738132469251 1.2473651675031532 1.0652203020280746 1.3555598740228163 1.0634490173790652 1.0653016406582112 1.1203874678127095 1.1970434157519378 0.9173341969055876 1.0 10.757199980369379 -14.999999999951381 0.06560553568636886 0.3758418673169219 1.4405184022975752 0.49696901291903817 0.09177452186472754 168.63577867613006 0.8317596505723693 16.869833647820595 2.5638950044080118 1.0000000001119491e-15 14.999999999951381 1.0646765349806533 DKEISADLADLS(ph)EELDNYQK ddPTM_A549_PD325901_60min_R1 1 DKEISADLADLSEELDNYQK 20 1 H3BTE1;H3BM37;Q8NC67-2;Q8NC67-3;Q8NC67 H3BTE1 NETO2 Neuropilin and tolloid-like protein 2 1 DKEIS(0.005)ADLADLS(0.982)EELDNY(0.014)QK 55.67 0.00214 2701600.0 1598.3 1704.9 1736.6 2074.2 2700.8 2446.1 2120.2 2246.5 2131.3 2210.8 2439.3 True False 1760.558239393728 1848.5779063470702 1854.4561190241345 2202.3186231500135 2511.105125254185 2426.179772601871 2200.885371217958 2201.691795154843 2041.728872795397 2071.209710702513 2139.2815639967207 0.8229670507254587 0.8641115491564644 0.8668592999789798 1.029466462112413 1.1738076780144844 1.1341096064368223 1.0287964932985005 1.02917345346609 0.9543993213221215 0.9681800402341465 1.0 11.06291066162443 -6.226518483250432 6.036090363691919 1.0130840497634706 0.8509567181264802 0.599424541803609 0.06607098356550835 0.1403193872202577 15.490501061108533 0.011038669921074868 0.02914848392994378 5.935830851987637e-07 6.226518483250432 -0.16212733163699034 DKEISPSVT(ph)KK ddPTM_A549_MK2206_60min_R1 1 DKEISPSVTKK 11 2 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 DKEIS(0.32)PS(0.32)VT(0.359)KK 47.532 0.011051 7209000.0 3197.6 3842.1 3523.5 3867.3 4812.0 3944.9 3359.8 3699.5 5219.4 5556.7 5373.8 True False 3737.276706185775 4037.646479064055 4023.1852824724233 4814.788673609693 4104.161174417853 4362.346699587314 3970.2321700443736 4223.915454243589 4037.2142336691027 4301.437610704245 4039.3371506650083 0.9252202940203929 0.9995814482579957 0.9960013567597531 1.191974943913018 1.016048183485296 1.0799659787916263 0.9828919998398109 1.0456951961903436 0.9994744392664633 1.0648869976095179 1.0 11.9799028529097 -8.67965305810454 1.3979484765765788 0.999131083888636 1.0342136782207667 0.0 0.06689737501359723 0.9756552095081965 3.7251319310774726 0.012475801425670957 0.013764690823272644 2.090965859577041e-09 8.67965305810454 0.03508259433213068 DKEISPSVT(ph)KK ddPTM_A549_PD325901_60min_R1 1 DKEISPSVTKK 11 2 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 DKEIS(0.258)PS(0.363)VT(0.379)KK 48.70399999999999 0.010284999999999999 10596000.0 2578.7 2502.1 2352.6 2107.4 2831.2 2207.6 2393.2 2824.2 3002.1 2430.6 3153.1 True False 2840.487725661393 2712.960748120713 2512.261583333054 2237.569311747343 2632.346279109764 2189.6220375274484 2484.2745356092887 2767.8691154579587 2875.9321770839706 2277.1315011912084 2765.2886891477315 1.0271939189599906 0.9810768614385986 0.9084988461394022 0.8091630072941741 0.9519245818493762 0.7918240312921162 0.8983780049290072 1.0009331489765803 1.0400115504650402 0.8234697195007967 1.0 11.433214386699198 -8.31659327776803 4.866240785602154 1.0187161310052848 0.9055836033430719 0.0 0.08737498458630849 0.1656800654727111 8.511177810929405 0.010903299767094057 0.013331336521606396 4.8239935919877635e-09 8.31659327776803 -0.11313252766221293 DKENGNNS(ph)PLPK ddPTM_A549_MK2206_60min_R1 2 DKENGNNSPLPK 12 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 DKENGNNS(1)PLPK;DKENGNNS(1)PLPK 133.28 1.4548e-08 100185000.0 14509.599999999999 15639.4 17388.2 14705.599999999999 22814.0 17009.0 17753.4 17448.9 25424.0 25994.0 26371.0 True False 16958.46575433861 16435.37865872162 19854.10822440385 18308.472660159467 19458.090821523045 18808.881090339575 20978.962976268165 19922.33501001513 19665.50459378536 20121.937346382958 19822.352897425822 0.8555223409699702 0.8291335919489132 1.0016019958449107 0.9236276215492586 0.9816236711258388 0.9488722750356312 1.0583487785142067 1.0050439074062842 0.9920873014191555 1.0151134656166898 1.0 14.274840598984898 -5.5104433552862995 0.7369005451960368 0.9987786812963179 0.764323403548331 0.6617383338863707 0.03874578152083345 0.8288718850594728 0.38760676197371674 0.005660151472815191 0.14871612500107645 3.0871422731495424e-06 5.5104433552862995 -0.2344552777479869 DKENGNNS(ph)PLPK ddPTM_A549_PD325901_60min_R1 3 DKENGNNSPLPK 12 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 DKENGNNS(1)PLPK;DKENGNNS(1)PLPK;DKENGNNS(1)PLPK 108.36 7.8491e-09 183081000.0 12973.4 12656.8 13337.400000000001 14052.7 16184.900000000001 14874.5 15367.3 16634.4 14625.3 15518.5 15698.699999999999 True False 14290.450017487694 13723.432955043463 14242.556168301564 14920.70336300271 15048.128458873849 14753.367003624751 15952.11101080923 16302.61384256565 14010.649501850761 14538.65926159623 13767.859422258565 1.0379572872733036 0.9967731754187381 1.0344786165724176 1.0837344357889316 1.0929896941383253 1.071580305343103 1.1586485975459173 1.1841066459619085 1.0176345553906279 1.055985452472845 1.0 13.749016651371564 -8.967429561993928 24.999731617858913 1.0077798711391934 1.0818985236513825 0.1782346243920272 0.052553032605706644 174.27597859328725 133768.06050782313 0.009638957433853228 0.010191285277265236 1.0778800603490614e-09 8.967429561993928 0.07411865251218908 DKEPFTFS(ph)SPASGR ddPTM_A549_PD325901_60min_R1 1 DKEPFTFSSPASGR 14 1 H0YEX2;Q6P1X5 H0YEX2 TAF2 Transcription initiation factor TFIID subunit 2 1 DKEPFT(0.027)FS(0.553)S(0.419)PAS(0.001)GR 59.281000000000006 0.0023626 6426700.0 2979.8 2852.6 2237.1 2496.4 3040.8 2897.6 2328.5 2527.9 2571.2 2693.5 3381.3 True False 3282.307102387179 3092.998613200569 2388.9230587751317 2650.596958264243 2827.224698190511 2874.0029062962194 2417.112341704092 2477.479051400815 2463.1414055888536 2523.4319503244146 2965.4215358267184 1.1068602094953484 1.0430215656804704 0.8055930767054111 0.8938347975965897 0.9533972367953145 0.9691717928038137 0.8150990719200516 0.8354559449539197 0.8306210013754972 0.8509521900470439 1.0 11.534021483672996 -5.5944527932288315 6.390223608759769 0.9040833730164788 1.0916938812345662 0.5523156790646679 0.06525954920238124 0.12751295039687727 8.665476387686967 0.010812582823689233 0.04326281706070361 2.544176323980086e-06 5.5944527932288315 0.18761050821808745 DKEPGSFIVRDS(ph)HSFR ddPTM_A549_MK2206_60min_R1 3 DKEPGSFIVRDSHSFR 16 2 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 DKEPGSFIVRDS(0.997)HS(0.003)FR;DKEPGSFIVRDS(0.969)HS(0.031)FR;DKEPGSFIVRDS(0.982)HS(0.018)FR 96.79 1.1648e-06 17852100.0 2545.46 2857.63 2483.54 2600.1899999999996 3573.21 3035.61 2386.0699999999997 2591.95 4129.13 3445.99 4228.13 True False 2975.071417477999 3003.0711610754033 2835.7433167111 3237.2366667269644 3047.595542402666 3356.8362353251646 2819.5880332096485 2959.3668500139656 3193.888647865674 2667.538465656004 3178.1686305484454 0.9360961494873862 0.9449061740179513 0.8922570342725161 1.0185855576103668 0.958915619866512 1.0562171569687562 0.8871738290120503 0.9311547605022072 1.0049462502291817 0.839331947340905 1.0 11.633979959380522 -2.000000000426938 0.1357155376338191 1.0176475376419387 0.7106461006547449 0.0 0.06916651794751728 87.1164173118237 0.7599054227800398 0.11577952697779507 5.196743988922735 0.009999999990169388 2.000000000426938 -0.30700143698719384 DKEPGSFIVRDS(ph)HSFR ddPTM_A549_PD325901_60min_R1 2 DKEPGSFIVRDSHSFR 16 2 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 DKEPGSFIVRDS(0.996)HS(0.004)FR;DKEPGSFIVRDS(0.976)HS(0.024)FR 114.55 3.8674e-08 20949200.0 3118.6000000000004 3229.6000000000004 3778.6000000000004 3468.4 3362.5 3363.1000000000004 3358.6 3517.8 3534.5 4023.3 4111.299999999999 True False 3435.19797620802 3501.769726282186 4035.0385185676605 3682.6351906920763 3126.3295999952607 3335.7120286322524 3486.4133608964407 3447.634719339287 3385.957256554841 3769.2681513793286 3605.6361636779907 0.9527300648948139 0.9711933116152647 1.1190919813860671 1.0213551849157019 0.8670674072689006 0.9251382771881238 0.9669343224414705 0.9561793156141601 0.9390734679954335 1.0453822793740848 1.0 11.816038109790625 -6.618613981870796 19.87652655698096 0.9589974833688449 1.0203446833222192 0.1958530898323506 0.05716863072636504 4.054243408986394 833.7108009282607 0.007753265005610014 0.016139723925933117 2.406500842899959e-07 6.618613981870796 0.06134719995337423 DKES(ph)DKEDGRES(ph)PSYDTPSQR ddPTM_A549_MK2206_60min_R1 2 DKESDKEDGRESPSYDTPSQR 21 3 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 2 DKES(1)DKEDGRES(0.988)PS(0.011)YDTPSQR;DKES(1)DKEDGRES(0.531)PS(0.442)Y(0.01)DT(0.014)PS(0.003)QR 76.294 8.432700000000001e-05 29515000.0 3179.4 2625.0 2388.3 1958.24 2991.2 2269.7 2306.74 2872.6 3422.7 3115.3999999999996 2979.1000000000004 True False 3716.0049911330534 2758.601287718471 2726.996852597954 2438.0088879087334 2551.1984424186794 2509.8781474950765 2725.8447990738023 3279.7998469685426 2647.463914928772 2411.62897626073 2239.3072510227626 1.6594440041382603 1.2318994128467768 1.217785925246501 1.088733529887521 1.1392802132237398 1.120827946387766 1.2172714565313993 1.4646493220037375 1.1822691654839197 1.0769531403782409 1.0 11.128836775834008 -2.0000000000034084 0.026965791877163303 1.4091068816588173e-12 2.942245557775048 0.2820739952975937 0.15263176976135262 1250.7079412101266 2.5197921423904655 90.92031663003306 206.00449048116013 0.00999999999992152 2.0000000000034084 2.942245557773639 DKES(ph)DKEDGRES(ph)PSYDTPSQR ddPTM_A549_PD325901_60min_R1 2 DKESDKEDGRESPSYDTPSQR 21 3 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 2 DKES(1)DKEDGRES(0.805)PS(0.186)Y(0.002)DT(0.007)PSQR;DKES(1)DKEDGRES(0.499)PS(0.499)YDT(0.002)PSQR 120.57 2.7857e-15 63608000.0 5133.2 5393.1 5647.700000000001 5460.200000000001 5840.9 5239.1 5389.6 5315.5 6415.6 6154.799999999999 6530.3 True False 5654.318685137889 5847.595464086094 6030.986884379021 5797.464152986075 5430.655334011097 5196.43450661807 5594.704177302287 5209.4781825709215 6145.974642849976 5766.18487761526 5727.114498982405 0.9872892686434939 1.0210369401773085 1.0530585490216073 1.0122836122826198 0.9482358585594922 0.9073390286751511 0.976880098747171 0.909616558826708 1.073136331383281 1.0068220006147592 1.0 12.483592731404794 -8.782954315886382 24.999491685949913 1.0345365943344487 0.9788684343229982 0.18502513191106085 0.04550250760061687 285.4803699450275 331715.17329520953 0.008993152699129712 0.00957809530953578 1.648335773415959e-09 8.782954315886382 -0.055668160011450474 DKESDKEDGRES(ph)PSYDT(ph)PSQR ddPTM_A549_PD325901_60min_R1 1 DKESDKEDGRESPSYDTPSQR 21 3 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 2 DKES(0.008)DKEDGRES(0.956)PS(0.038)Y(0.004)DT(0.602)PS(0.391)QR 51.473 0.058337 11200000.0 1302.3 1904.3 1671.4 1744.3 1708.9 1697.1 2114.1 1926.3 1886.3 1802.3 2152.3 True False 1434.5085372974115 2064.782044141432 1784.831254944685 1852.041449407275 1588.872759384953 1683.2793802717108 2194.5532323799102 1887.8784353468845 1807.0253707849465 1688.502470417557 1887.5807445538242 0.7599720125543518 1.0938774672812706 0.9455655129426389 0.9811720397926872 0.841750883488972 0.8917654967229468 1.1626274736653168 1.0001577102298376 0.957323481921872 0.8945325784284136 1.0 10.88232264421282 DKESDKEDGRES(ph)PSYDTPSQR ddPTM_A549_MK2206_60min_R1 9 DKESDKEDGRESPSYDTPSQR 21 3 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 DKESDKEDGRES(0.992)PS(0.008)YDTPSQR;DKES(0.103)DKEDGRES(0.891)PS(0.006)YDTPSQR;DKES(0.142)DKEDGRES(0.833)PS(0.023)Y(0.001)DTPSQR;DKES(0.016)DKEDGRES(0.982)PS(0.002)YDTPSQR;DKES(0.011)DKEDGRES(0.982)PS(0.007)YDTPSQR;DKESDKEDGRES(0.999)PS(0.001)YDTPSQR;DKES(0.013)DKEDGRES(0.934)PS(0.04)Y(0.001)DT(0.006)PS(0.006)QR;DKESDKEDGRES(0.94)PS(0.058)YDT(0.001)PSQR;DKESDKEDGRES(1)PSYDTPSQR 268.24 1.8813999999999993e-112 2048068300.0 22846.23 22997.45 19932.43 18570.670000000002 26542.590000000004 21632.5 20107.809999999998 20288.94 28896.199999999997 30225.0 29909.159999999996 True False 26702.11508730381 24167.921974949004 22759.148295703653 23120.484983669056 22638.210171756367 23921.636791508652 23761.138797291496 23164.959377272844 22351.256837749377 23397.15150782584 22481.890121177516 1.1877166440801576 1.0749951113844862 1.0123325117697717 1.0284048564889121 1.006953154282682 1.064040285873247 1.0569012956303416 1.030383088450908 0.9941893994355446 1.0407110515047917 1.0 14.456475711986322 -2.0000000919532295 0.8250168209359849 1.0089541031752818 55.33256274507375 0.742481953511951 0.026235260491133228 189.0747218491657 0.553448182633823 0.00438678705198297 19252.04271494547 0.009999997882698869 2.0000000919532295 54.32360864189847 DKESDKEDGRES(ph)PSYDTPSQR ddPTM_A549_PD325901_60min_R1 10 DKESDKEDGRESPSYDTPSQR 21 3 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 DKESDKEDGRES(1)PSYDTPSQR;DKESDKEDGRES(1)PSYDTPSQR;DKESDKEDGRES(0.995)PS(0.005)YDTPSQR;DKES(0.005)DKEDGRES(0.976)PS(0.017)YDT(0.002)PSQR;DKESDKEDGRES(0.999)PS(0.001)YDTPSQR;DKES(0.002)DKEDGRES(0.959)PS(0.039)YDT(0.001)PSQR;DKESDKEDGRES(1)PSYDTPSQR;DKES(0.002)DKEDGRES(0.968)PS(0.029)Y(0.001)DTPSQR;DKES(0.002)DKEDGRES(0.993)PS(0.004)YDTPSQR;DKESDKEDGRES(0.993)PS(0.006)YDTPSQR 278.52 8.912199999999998e-128 3876717700.0 48759.00000000001 46581.100000000006 48093.899999999994 46888.50000000001 55257.2 47611.1 47490.200000000004 47474.399999999994 53085.19999999999 52329.09999999999 53964.399999999994 True False 53708.97778552136 50506.652773384696 51357.841266114745 49784.696153490266 51376.12489899126 47223.370987009905 49297.465548634595 46527.48584905368 50854.21365275573 49025.031695459926 47327.12090851664 1.134845660468991 1.0671820259469003 1.0851672419581468 1.0519274191583325 1.0855535665966527 0.9978078125287341 1.0416324636338354 0.9831040839985036 1.074525825288569 1.0358760633300585 1.0 15.530379539585919 -2.0000000000000155 0.3286342568407888 1.0274724849849124 2.0168924157270176 0.5340907125641463 0.029512170115223346 35.8136633625638 0.44568769841153183 0.009653213811639399 21.84357821224532 0.009999999999999643 2.0000000000000155 0.9894199307421052 DKEVS(ph)DDEAEEK ddPTM_A549_MK2206_60min_R1 4 DKEVSDDEAEEK 12 1 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK 196.95 1.5288e-24 785865000.0 61947.6 60475.8 56859.3 56759.1 43654.3 16054.1 11215.210000000001 12839.400000000001 26328.2 65541.1 62771.600000000006 True False 72402.84040659046 63553.75990697323 64922.803726886414 70665.08204801283 37232.81029850155 17752.934206150898 13252.868484970359 14659.424269013412 20364.904737496057 50735.319989729214 47183.679311973574 1.5344890746622455 1.3469437066737078 1.3759589051464935 1.4976594254293454 0.7891035807598235 0.376251586671958 0.2808782332836694 0.3106884516590329 0.4316090867531849 1.075272652102278 1.0 15.526000301691322 -6.835783507817481 4.605888957752055 0.6293208433464249 1.4287585739445323 0.7180054527864654 0.2512333721468301 0.10656799293474496 4.246063220737194 0.04308184268993247 0.08423567946825698 1.459541648318788e-07 6.835783507817481 0.7994377305981074 DKEVS(ph)DDEAEEK ddPTM_A549_PD325901_60min_R1 6 DKEVSDDEAEEK 12 1 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK 231.13 1.1654999999999998e-40 1778141500.0 105680.09999999999 104067.9 114801.2 111164.0 114749.1 94496.7 102445.20000000001 97861.90000000001 98253.5 108234.9 106597.0 True False 116408.66595442234 112838.06715932683 122592.29978769623 118030.34780823851 106689.5190789045 93727.15020548104 106343.80814616452 95909.96763332473 94124.24708075017 101400.92994251648 93486.24477405744 1.2451956567061286 1.2070018154225781 1.3113405087987422 1.2625423996171905 1.1412322672362918 1.0025769077793834 1.1375342800770523 1.0259259837115617 1.006824558075198 1.0846614941865262 1.0 16.512466487265094 -7.023920495582543 2.3822782100944284 1.0155737264117544 1.2581292023882205 0.7966848165465447 0.04921186242033221 0.07974442539702244 0.9020822773049519 0.0070017519176833135 0.013792488144137086 9.464104007779072e-08 7.023920495582543 0.2425554759764661 DKEVS(ph)DDEAEEKEDK ddPTM_A549_MK2206_60min_R1 6 DKEVSDDEAEEKEDK 15 2 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK 159.04 2.8885e-20 132824900.0 32599.0 35089.9 31331.5 31892.899999999998 31311.300000000003 18086.1 13789.1 16186.2 25172.700000000004 35764.3 34629.100000000006 True False 38100.91423097016 36875.82602891899 35774.77782823465 39706.66193172668 26705.449247828317 19999.959097418458 16294.400980998538 18480.64341815855 19471.123642541726 27685.119790614917 26029.738755460494 1.4637455484633852 1.4166806042639677 1.374380978784501 1.5254345156805331 1.025959173033424 0.76835035823104 0.6259917217793941 0.7099819015387429 0.7480337711210064 1.0635957606300277 1.0 14.667873211917946 -6.907390883062601 3.9083655716306276 0.8370950907346144 1.4370238660411434 0.8477162517571786 0.12359246931795134 0.07197910695661629 2.104246849163901 0.020182251193528063 0.03938166939731777 1.2376821197846694e-07 6.907390883062601 0.599928775306529 DKEVS(ph)DDEAEEKEDK ddPTM_A549_PD325901_60min_R1 4 DKEVSDDEAEEKEDK 15 2 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK 209.01 8.3205e-46 432563000.0 53602.6 53810.600000000006 62197.3 61052.5 64520.4 51052.59999999999 51504.0 53085.9 52483.1 59828.899999999994 58120.6 True False 59044.29649185148 58345.408110317156 66418.38280074848 64823.57426471232 59988.70968729645 50636.844552035545 53464.012904070216 52027.0600794171 50277.41782189658 56051.293043536025 50972.13465683921 1.158364209962103 1.144653024699028 1.3030331817158214 1.2717453310740359 1.1768922390863108 0.9934220901859232 1.0488870686701102 1.0206961201385814 0.9863706544836766 1.0996457853078223 1.0 15.63742115253668 -7.193646967311356 3.857139683179169 0.9999170036586814 1.2203909093803265 0.7386432233086051 0.05432840016558292 0.06891235017072533 2.0287355973766497 0.007029299202793583 0.012385592914944567 6.402550795510033e-08 7.193646967311356 0.22047390572164505 DKEVS(ph)DDEAEEKEDKEE ddPTM_A549_PD325901_60min_R1 1 DKEVSDDEAEEKEDKEE 17 3 G3V2J8 G3V2J8 HSP90AA1 1 DKEVS(1)DDEAEEKEDKEE 61.523999999999994 0.0031320999999999996 10176000.0 5062.1 5025.9 5910.9 5063.1 5627.4 5342.5 5560.5 5545.9 4743.9 4743.0 5786.2 True False 5576.000665478939 5449.450231397583 6312.049219129199 5375.836187865607 5232.150837476082 5298.992451300228 5772.10787032235 5435.282673825616 4544.53038035663 4443.526170554554 5074.534081743874 1.098820221848374 1.0738818862213393 1.2438677359242507 1.0593753241712764 1.0310603403570093 1.0442323109748863 1.1374655835080634 1.0710899929472482 0.8955561844989902 0.8756520498188333 1.0 12.309059652021057 -8.649370005615907 6.026883990284627 0.9509191341859898 1.0972168572385694 0.5882469366194324 0.06294015047647954 0.12502607113901293 6.223535721249945 0.011090402174301435 0.012565437673372681 2.241971019143424e-09 8.649370005615907 0.1462977230525796 DKEVS(ph)DDEAEEKEDKEEEK ddPTM_A549_MK2206_60min_R1 5 DKEVSDDEAEEKEDKEEEK 19 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK 158.94 2.5108e-27 1831598900.0 20227.800000000003 24144.699999999997 21043.600000000002 21790.9 29044.100000000002 23043.2 19675.8 25145.0 24705.500000000004 27268.5 26762.800000000003 True False 23641.758117771045 25373.562099648076 24027.898910241707 27129.671478230674 24771.751364486627 25481.61612916178 23250.63817231952 28709.380753332865 19109.743696576625 21108.526911204262 20116.858144295937 1.1752211974748443 1.2613083970492012 1.194416083162307 1.3486038069977242 1.2313926551950445 1.2666797144158914 1.1557788003248486 1.4271304468820996 0.9499367922915499 1.0492954098396081 1.0 14.296117381830703 -8.78169231729031 24.99996826478101 0.9763589977866263 1.254659097708048 0.6860215851237286 0.07722208725017077 75.46166598217829 93148.5160487615 0.011750305659855161 0.012516629013374707 1.6531325710469558e-09 8.78169231729031 0.2783000999214218 DKEVS(ph)DDEAEEKEDKEEEK ddPTM_A549_PD325901_60min_R1 3 DKEVSDDEAEEKEDKEEEK 19 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK 176.44 3.3707999999999996e-35 3690079000.0 49043.8 51696.7 53106.5 47164.8 60381.2 49425.3 50223.3 48134.2 51677.8 53376.5 57504.8 True False 54022.69047186266 56053.36233858444 56710.626445327216 50078.062576967386 56140.23281583166 49022.79674370598 52134.575164744296 47174.125620450606 49505.96178039037 50006.298680709515 50432.074152961366 1.0711970780343258 1.111462561872304 1.1244952224912046 0.9929804279927045 1.113185086252002 0.9720559300222111 1.0337582984713105 0.9353992754168836 0.9816364409331633 0.9915574467359707 1.0 15.622053940729199 -7.0250995541011845 1.0069375513707222 0.9874125516224423 1.096613552803338 0.5425587966354706 0.04208490108063165 0.28641238349419085 0.5663949215260388 0.006396119616484252 0.017080479902482067 9.438444923240012e-08 7.0250995541011845 0.10920100118089571 DKFS(ph)PFPVQDRPESSLVFK ddPTM_A549_MK2206_60min_R1 4 DKFSPFPVQDRPESSLVFK 19 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DKFS(1)PFPVQDRPESSLVFK;DKFS(1)PFPVQDRPESSLVFK;DKFS(0.996)PFPVQDRPES(0.002)S(0.002)LVFK;DKFS(1)PFPVQDRPESSLVFK 138.93 5.5861e-18 94757500.0 10988.9 11069.8 10740.4 9038.4 13605.3 11001.1 10232.7 10719.5 14837.300000000001 15408.5 15165.9 True False 12843.557667189418 11633.205537061314 12263.550222184414 11252.808405749189 11603.978392831934 12165.229100060838 12091.849135785784 12239.02195209194 11476.675240299382 11927.709148331985 11399.78847245346 1.126648770564883 1.0204755610309688 1.0757699804534229 0.9871067724581526 1.0179117288774155 1.0671451605840754 1.0607082021745073 1.0736183378899014 1.0067445784657947 1.046309690495942 1.0 13.476719434415461 -2.0000000328457763 0.07950916241178854 0.9533193410092936 1.2667559298293183 0.040599253569044924 0.038880354875409195 157.10773844860677 0.8851447626900032 0.5210524860583535 5.418967258686374 0.00999999924369808 2.0000000328457763 0.3134365888200247 DKFS(ph)PFPVQDRPESSLVFK ddPTM_A549_PD325901_60min_R1 2 DKFSPFPVQDRPESSLVFK 19 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DKFS(1)PFPVQDRPESSLVFK;DKFS(1)PFPVQDRPESSLVFK 143.05 2.8146e-21 118392000.0 6175.0 6741.9 5961.3 6319.8 7577.1 6422.9 6387.200000000001 6563.8 7223.8 6901.5 7038.700000000001 True False 6801.881454205265 7310.063573700109 6365.8696662090215 6710.159692692828 7044.910635575939 6370.594031905705 6630.268391209952 6432.879859798512 6920.208807441185 6465.738112182639 6172.984521995538 1.101878909621245 1.1842024789877472 1.0312466592984635 1.087020333322274 1.141248712105718 1.0320119885617802 1.074078246524841 1.0421020556388756 1.121047490526364 1.047424967476261 1.0 12.591752458645981 -10.922142196583597 1.0030155419748108 0.9961294398285943 1.0919727912539479 0.21205686743871166 0.04666925455138166 0.5233315733612249 0.870020611507896 0.03806009369449421 0.007613585250679454 1.196348758981713e-11 10.922142196583597 0.0958433514253536 DKFSFDLGK ddPTM_A549_MK2206_60min_R1 1 DKFSFDLGK 9 1 Q02790;F5H1U3 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 45.161 0.050425 1262700.0 838.0 1050.8 884.2 1081.7 1348.4 935.06 874.75 766.76 1408.2 1410.7 1339.4 False True 979.4339128670507 1104.281231670312 1009.5928556157562 1346.7165485593587 1150.0521462146794 1034.007428557406 1033.6807520525979 875.4505781040169 1089.2449484333122 1092.0218902262998 1006.7900144405658 0.9728283940234391 1.096833714907193 1.002783938194647 1.337633994421048 1.1422959402847463 1.0270338538587551 1.0267093805325178 0.8695463458588939 1.0818988396885953 1.084657053172199 1.0 9.975547097385538 -7.274727244170597 21.339493963037036 1.0237563029877528 1.1163544077726157 0.17411470293158737 0.10223441845770274 159.93759685573212 256850.14999962496 0.015249576979217257 0.024507869667401032 5.3121796748164746e-08 7.274727244170597 0.09259810478486297 DKFSFDLGK ddPTM_A549_PD325901_60min_R1 2 DKFSFDLGK 9 1 Q02790;F5H1U3 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 70.1 0.0037491 4452300.0 2759.5 2883.3 2974.8 3314.9 4010.3999999999996 2986.1 2946.7 3367.3 2640.4 3683.8 3972.0 False True 3039.642408563469 3126.285809942229 3176.6878169256 3519.6538443158706 3728.723339128921 2961.7821916383 3058.8382809961095 3300.1365599042533 2529.4331702383365 3451.20423931876 3483.469180582533 0.8725905845548936 0.897463318283019 0.911932229695906 1.0103875366359023 1.0704051466605409 0.850239240854431 0.8781011464222532 0.9473706781445899 0.7261247449346874 0.9907376986586751 1.0 11.766309084004648 DKGATKES(ph)SEKDR ddPTM_A549_PD325901_60min_R1 1 DKGATKESSEKDR 13 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 DKGAT(0.457)KES(0.507)S(0.036)EKDR 50.831 0.004795399999999999 18239000.0 4200.7 3459.3 2728.8 2417.4 2943.1 2000.8 1454.9 2006.1 2074.4 3988.8 4617.6 True False 4627.151971608105 3750.8273514144075 2913.992777607428 2566.7173076862605 2736.386809143809 1984.5061481631249 1510.2670156518286 1966.086761744994 1987.2201819203174 3736.9464872671356 4049.6644733781254 1.1426013196960623 0.9262069428397767 0.7195640025892442 0.6338098685852784 0.6757070436655671 0.4900421161330685 0.37293633227643747 0.48549374267170714 0.49071230344735933 0.9227792850082396 1.0 11.983586666080111 -2.1191622324363864 15.764974444905999 0.712877435558022 1.1976655405492087 0.0 0.2394357951611737 0.0 0.0 0.03591595670620419 0.0 0.007600423070683569 2.1191622324363864 0.48478810499118674 DKGATKESS(ph)EKDR ddPTM_A549_PD325901_60min_R1 1 DKGATKESSEKDR 13 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 DKGAT(0.074)KES(0.412)S(0.514)EKDR 43.297 0.012866999999999998 20284000.0 2859.6 3500.5 2688.3 2521.9 2567.0 2182.2 1129.4 1930.7 2590.0 3158.5 4023.4 True False 3149.9044868737433 3795.4994200058195 2870.7442040611436 2677.672035349543 2386.7027756692437 2164.428886706103 1172.3799350313934 1892.1906738951504 2481.1513069676166 2959.071770967019 3528.5473064339785 0.8926915847578931 1.075654962336789 0.8135767937209196 0.7588596107148844 0.6763981231928824 0.6134050924468174 0.33225569426082724 0.5362520350640946 0.7031650964246582 0.8386090688288141 1.0 11.784858636668227 -5.908873349581981 5.640454354260962 0.7609364789993132 0.9819977141129335 0.22495325896019946 0.17753679862553554 0.31760241512702814 15.63058155722404 0.031237711594871237 0.10032437588407803 1.233464487848517e-06 5.908873349581981 0.2210612351136203 DKGEYTLVVK ddPTM_A549_MK2206_60min_R1 2 DKGEYTLVVK 10 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 110.86 0.00017778 8470900.0 5053.299999999999 5825.5 6076.0 5577.7 7276.799999999999 6419.200000000001 5165.3 5390.6 8029.299999999999 7372.0 8012.799999999999 False True 5906.173498676692 6121.993067277696 6937.668164127275 6944.236750392464 6206.392359518669 7098.475483279898 6103.768149273828 6154.734058020133 6210.676370157359 5706.660079923644 6023.00061797026 0.9806031699639876 1.0164357362029952 1.1518624360469112 1.1529530197412896 1.030448567612834 1.1785613074819958 1.0134098494133623 1.0218717294593715 1.0311598427579685 0.9474779170530416 1.0 12.556266691606002 DKGEYTLVVK ddPTM_A549_PD325901_60min_R1 1 DKGEYTLVVK 10 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 109.24 0.00022111 5697800.0 4888.1 4338.8 4144.9 5038.4 6144.1 5599.4 4776.2 4587.3 5405.9 5477.1 5992.8 False True 5384.336313570972 4704.445903019922 4426.197839308502 5349.6105249633765 5712.5596119943175 5553.800342875154 4957.960904636924 4495.802702832766 5178.70882252364 5131.274971272269 5255.723591489179 1.0244709828899796 0.8951090789169421 0.8421671654262861 1.0178637502219927 1.0869216222186633 1.0567146932667204 0.9433450634020337 0.855410796357901 0.9853464955633793 0.9763213155999233 1.0 12.359673688238281 -2.000000000000002 0.17190276203367147 0.9969243261039774 0.7825498305214693 0.0 0.07618021526534077 182.5480880205425 1.8654678774712858 0.09727999747202692 10.200298192186297 0.009999999999999948 2.000000000000002 -0.2143744955825081 DKGQKS(ph)PAEQK ddPTM_A549_PD325901_60min_R1 2 DKGQKSPAEQK 11 2 Q9H6Z4-2;Q9H6Z4;K7EPW1;K7EMT3 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 DKGQKS(1)PAEQK;DKGQKS(1)PAEQK 54.09 0.0040238 52038000.0 4500.7 4814.4 3581.7000000000003 3149.0 3906.8 3266.3 2136.8 3236.0 3262.8 4594.7 4992.1 True False 4957.607750759774 5220.126384138268 3824.7757005117733 3343.506578102109 3632.3998457283237 3239.7003357383137 2218.117093301825 3171.4554414071094 3125.675862692641 4304.589857863593 4378.103347529221 1.132364258499653 1.1923259845120473 0.8736147589275804 0.7636883629046843 0.8296743035493362 0.7399780403919968 0.5066388153111137 0.7243902643817026 0.7139337778439182 0.983208827240884 1.0 12.096090295190105 -5.828999713264401 4.541890353935883 0.8101617327437534 1.1641787178390552 0.5470660486530334 0.1297374485781425 0.1357516702243204 5.3536854888391066 0.021440044569801153 0.07383294798029728 1.4825190639538116e-06 5.828999713264401 0.3540169850953019 DKGQS(ph)FNDKR ddPTM_A549_MK2206_60min_R1 1 DKGQSFNDKR 10 2 A0A590UJ25;A0A590UJL2;A0A590UJ08;A0A590UJC5;Q12959-4;Q12959-2 A0A590UJ25 DLG1 Disks large homolog 1 1 DKGQS(1)FNDKR 40.577 0.032139999999999995 14427000.0 1359.3 1514.3 1329.8 1403.6 2176.0 1271.0 1091.4 1415.0 2335.9 2601.8 2976.0 True False 1588.7166083057052 1591.3714019017464 1518.3856360527395 1747.4820630099978 1855.9132825297693 1405.496376378482 1289.693252689574 1615.5805832557571 1806.8223796657962 2014.0515729714236 2236.97706657841 0.7102069270364681 0.7113937043332519 0.6787667422872605 0.7811801422188365 0.8296523510491324 0.6283016475123157 0.5765339627116682 0.7222159794990138 0.8077071538464358 0.9003452038299328 1.0 11.127334750668776 -9.707531378714503 0.7643652034655312 0.9790382889906019 0.7050545717589742 0.6221316124444188 0.07147774880987912 0.24054616684615357 0.2973543573293211 0.029596616644328565 0.016423170748012476 1.960959486798366e-10 9.707531378714503 -0.2739837172316276 DKGS(ph)FNDKR ddPTM_A549_MK2206_60min_R1 2 DKGSFNDKR 9 2 A0A590UK02;A0A590UJD9;A0A0C4DFT3;A0A590UK70 A0A590UK02 DLG1 1 DKGS(1)FNDKR;DKGS(1)FNDKR 51.773999999999994 0.0052052 34797000.0 6857.900000000001 7763.4 6648.099999999999 6456.5 8600.6 6536.1 6510.299999999999 6651.1 9420.6 9887.1 10364.599999999999 True False 8015.345860442658 8158.523899837553 7590.900546730503 8038.342789843299 7335.463133145925 7227.745763687955 7693.137239311832 7593.913793139485 7286.8491416069155 7653.597243110825 7790.783771592267 1.0288240689812516 1.047201942580692 0.9743436307922442 1.0317758810292892 0.9415565042240565 0.9277302484048741 0.9874664045180556 0.9747304014301317 0.9353165682992177 0.9823911775113476 1.0 12.927552758842445 -6.129563988309692 1.2219386643402754 0.9668387348757506 1.0382613196000623 0.42290642890571606 0.029034877407597467 0.44846424584929 1.1385300548025965 0.004881657456185745 0.026889534181338184 7.420548564137323e-07 6.129563988309692 0.07142258472431173 DKGS(ph)FNDKR ddPTM_A549_PD325901_60min_R1 2 DKGSFNDKR 9 2 A0A590UK02;A0A590UJD9;A0A0C4DFT3;A0A590UK70 A0A590UK02 DLG1 1 DKGS(1)FNDKR;DKGS(1)FNDKR 61.641000000000005 0.0024757 61774000.0 9815.900000000001 10192.2 10141.6 9354.5 12210.7 11199.3 11603.4 11310.2 11807.3 12199.4 13429.7 True False 10812.402941916343 11051.132463529017 10829.869962395014 9932.30621938907 11353.062556628149 11108.096613916074 12044.97373662412 11084.609188319748 11311.080241991787 11429.127802037367 11777.932037882489 0.9180221882024262 0.938291410409247 0.9195052176869308 0.8432979734848904 0.9639266485926569 0.9431279258691628 1.0226730548183434 0.9411337366073483 0.9603621591303871 0.9703849338981385 1.0 13.523798633438407 -6.975235229009125 24.858501429699118 0.9775636916215387 0.9076481895560455 0.5128852909116659 0.03122760973330851 131.91299018146853 132411.5361822359 0.004607470724831798 0.008707051817530582 1.0586801518349348e-07 6.975235229009125 -0.06991550206549313 DKHIEEVRK ddPTM_A549_MK2206_60min_R1 2 DKHIEEVRK 9 2 P16949 P16949 STMN1 Stathmin 0 ; 73.885 0.0006502999999999999 11870000.0 1088.3799999999999 1131.1100000000001 1437.55 671.8100000000001 1875.6 1212.35 1106.67 1180.46 1810.6399999999999 1976.55 2035.62 False True 1272.0719356637708 1188.6786676385689 1641.4162062773476 836.4034801586974 1599.7017245922957 1340.6400723072009 1307.7376140314932 1347.7938200071321 1400.5329309979352 1530.0459822264067 1530.119373746084 0.8313547017899958 0.7768535501438756 1.0727373526803883 0.5466262923728555 1.045475112622003 0.876166981027765 0.8546637840614036 0.8808422683436934 0.9153095863162026 0.99995203542878 1.0 10.579428495222734 -10.230489420112606 0.20119920056487883 1.082412397602626 0.8141585728788706 0.15381295585499188 0.1295155860601086 7.9755695710464725 0.6123729149195971 0.6047593817380502 0.1822430725699092 5.881804426857959e-11 10.230489420112606 -0.2682538247237555 DKHIEEVRK ddPTM_A549_PD325901_60min_R1 2 DKHIEEVRK 9 2 P16949 P16949 STMN1 Stathmin 0 ; 77.37899999999999 0.00056763 9615400.0 826.84 1367.56 1238.83 1215.0 1524.77 1326.32 1250.3000000000002 1232.23 1640.13 1498.87 1421.42 False True 910.7801881125631 1482.8090806522378 1322.904453489964 1290.0477905347934 1417.6754153709362 1315.5188896599939 1297.8808506904127 1207.6522059842662 1571.2010398057137 1404.2310924012454 1246.5943511237726 0.7306147242617602 1.189488047427396 1.0612148629563416 1.0348577220583814 1.1372387610235346 1.055290270226307 1.0411412898834385 0.9687611731078348 1.260394801556189 1.1264539191400693 1.0 10.283776365042225 -5.252834055002064 24.670392095239272 1.1007747953542029 0.73061449777846 0.6049403553462078 0.08227218772532548 576.2746491069355 1652063.5773934524 0.014174687877591668 0.22721850558038018 5.58683628356571e-06 5.252834055002064 -0.37016029757574287 DKIELDSSS(ph)PASKENEEK ddPTM_A549_PD325901_60min_R1 1 DKIELDSSSPASKENEEK 18 2 H0YKY0;H0YN33;Q9BW66-2;Q9BW66;Q9BW66-3 H0YKY0 CINP Cyclin-dependent kinase 2-interacting protein 1 DKIELDS(0.098)S(0.098)S(0.804)PASKENEEK 85.35 1.4155e-05 11671000.0 2484.3 3036.1 3485.3 3107.6 3125.4 2802.4 3067.1 3279.6 3739.0 3799.8 3568.0 True False 2736.504307155002 3291.962802193876 3721.8334168114843 3299.549394128329 2905.882686044667 2779.57818353276 3183.82016888152 3214.1858052035695 3581.8628327227457 3559.879979522077 3129.1586194155293 0.8745176068019627 1.0520281016654744 1.1894038843919827 1.0544525846838104 0.9286466553707123 0.8882829289273726 1.0174684495464155 1.027172539372236 1.1446728237099637 1.1376476594807452 1.0 11.61155907639658 -8.535196191851234 24.439945244971316 1.0692443018415336 1.0061376968734996 0.15231041938873635 0.0907227793467469 361.17253514904235 716625.6744285751 0.016950262027318107 0.019226354176462526 2.9161093685665986e-09 8.535196191851234 -0.063106604968034 DKKAEGAATEEEGT(ph)PK ddPTM_A549_PD325901_60min_R1 1 DKKAEGAATEEEGTPK 16 2 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 DKKAEGAATEEEGT(1)PK 140.06 7.8619e-12 19292000.0 2261.4 2275.7 2258.0 2556.1 2331.7 3150.2 2823.9 3162.9 2522.6 3349.3 3409.0 True False 2490.9756632453086 2467.4812255698434 2411.241458457042 2713.9844916757056 2167.929435928312 3124.545815645482 2931.3650597973724 3099.813478252949 2416.5838945778023 3137.8246264048844 2989.714611431487 0.8331817537770335 0.8253233322455497 0.8065122501115685 0.907773765863304 0.7251292239195698 1.0450983527653288 0.9804832369581334 1.0368258784301645 0.8082991886040697 1.04953985052857 1.0 11.545792060616222 -7.256990928934517 24.976087581204002 0.9323732684527422 0.824076134977321 0.4317292700864154 0.08356618374663839 429.48761100452106 2411380.9572818982 0.013696031120712982 0.02320871266518335 5.533616671049246e-08 7.256990928934517 -0.10829713347542114 DKKAEGAATEEEGT(ph)PKESEPQAAAEPAEAK ddPTM_A549_MK2206_60min_R1 2 DKKAEGAATEEEGTPKESEPQAAAEPAEAK 30 3 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 DKKAEGAAT(0.001)EEEGT(0.999)PKESEPQAAAEPAEAK;DKKAEGAAT(0.019)EEEGT(0.792)PKES(0.189)EPQAAAEPAEAK 161.62 1.0225e-46 24444000.0 1852.24 1977.06 1953.83 1656.09 2594.91 1806.35 1570.69 1499.74 2657.45 3628.56 4167.17 True False 2164.852829079791 2077.6839092939736 2230.9124735215246 2061.832124344705 2213.2021764564897 1997.496758041913 1856.064041659326 1712.332737761123 2055.5418180756324 2808.865775855632 3132.3466809588576 0.6911281060425589 0.6632994750944885 0.712217612144582 0.6582388012407195 0.7065636092933991 0.6376997700109138 0.5925474510666735 0.5466613092893513 0.6562306243338303 0.8967288943239822 1.0 11.613028180311824 -10.503853966622238 0.813491709254778 1.0013442755597408 0.6512607373836252 0.8086373922792116 0.05479303365083044 0.17892305710269138 0.2120955439529511 0.03736870855507572 0.010576075931432923 3.134339482202194e-11 10.503853966622238 -0.3500835381761156 DKKAEGAATEEEGT(ph)PKESEPQAAAEPAEAK ddPTM_A549_PD325901_60min_R1 2 DKKAEGAATEEEGTPKESEPQAAAEPAEAK 30 3 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 DKKAEGAATEEEGT(1)PKESEPQAAAEPAEAK;DKKAEGAAT(0.02)EEEGT(0.887)PKES(0.093)EPQAAAEPAEAK 202.52 2.9830999999999994e-78 49701700.0 3637.33 3282.08 2754.11 3939.39 3396.6 5131.46 4603.62 4783.97 4260.41 5182.5199999999995 4728.41 True False 4006.5890639391764 3558.6724000607624 2941.0204664088233 4182.717173296177 3158.0345336338737 5089.671091090138 4778.813278297525 4688.549965398138 4081.3597836748663 4855.294802745603 4146.8455458605895 0.9661775486040424 0.8581637200384891 0.7092187142934635 1.0086503408527947 0.7615510389062468 1.2273596966182365 1.1523972198742176 1.1306304788897386 0.9842082948444772 1.1708405218014915 1.0 12.017798598033112 -6.378621409432473 9.43858119408575 1.015065399641526 0.8460021478156555 0.2948760185035143 0.1349448018674657 0.36675327541355895 27.3695756604632 0.017867067847941922 0.0415636707298754 4.1819476364184973e-07 6.378621409432473 -0.16906325182587045 DKKDEEEDMS(ph)LD ddPTM_A549_MK2206_60min_R1 4 DKKDEEEDMSLD 12 2 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 DKKDEEEDMS(1)LD;DKKDEEEDMS(1)LD;DKKDEEEDMS(1)LD;DKKDEEEDMS(1)LD 52.522 0.0080947 83452000.0 16829.2 18371.4 15867.5 16356.599999999999 22020.699999999997 18190.1 15905.3 18483.0 24246.300000000003 25789.899999999998 27615.5 True False 19669.557525563436 19306.425789406156 18117.75009780933 20363.96773427568 18781.484200644896 20114.964308388855 18795.08712846206 21103.021851813537 18754.551763384912 19963.943678136544 20757.80920097314 0.9475738665447081 0.9300801256281447 0.8728161012752712 0.9810268288486341 0.9047912532004778 0.9690311782731797 0.9054465693605533 1.0166304954197292 0.9034937927122717 0.9617558136723128 1.0 14.341366567865906 -11.001677924384481 1.2018589225378655 1.0010434174300822 0.933887042099323 0.12495885910823801 0.040535359613483125 0.4933837159133729 1.235017750446152 0.02807671101700084 0.005983515181161081 9.961438902845525e-12 11.001677924384481 -0.06715637533075913 DKKDEEEDMS(ph)LD ddPTM_A549_PD325901_60min_R1 3 DKKDEEEDMSLD 12 2 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 DKKDEEEDMS(1)LD;DKKDEEEDMS(1)LD;DKKDEEEDMS(1)LD 52.254 0.008281499999999999 113387000.0 23955.9 23756.6 25305.3 23986.5 26390.699999999997 28828.199999999997 25390.0 25400.2 25131.1 26492.5 28407.5 True False 26387.885332598515 25758.65205579496 27022.669831130643 25468.09162770601 24537.10827497248 28593.432697159235 26356.2303439411 24893.573084928576 24074.927262754383 24819.759028761673 24913.557589979453 1.0591777283229937 1.0339210673852302 1.0846572085714286 1.0222583240359697 0.9848897808493483 1.1477057258438221 1.0579071354523013 0.9991978461936357 0.9663383953015856 0.9962350394607831 1.0 14.604643428865995 -8.33604069169879 4.3694615065681 0.9841814195113814 1.0555865743492647 0.3946233696679854 0.03895875945829905 0.16448293890027035 5.9952780003960155 0.00645483602971946 0.007884998440666348 4.612743529281047e-09 8.33604069169879 0.07140515483788334 DKKS(ph)PLIESTANMDNNQSQK ddPTM_A549_MK2206_60min_R1 17 DKKSPLIESTANMDNNQSQK 20 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 DKKS(0.69)PLIES(0.282)T(0.028)ANMDNNQSQK;DKKS(1)PLIESTANMDNNQSQK;DKKS(0.929)PLIES(0.035)T(0.035)ANMDNNQSQK;DKKS(0.999)PLIES(0.001)T(0.001)ANMDNNQSQK;DKKS(0.999)PLIES(0.001)T(0.001)ANMDNNQSQK;DKKS(0.99)PLIES(0.005)T(0.005)ANMDNNQSQK;DKKS(1)PLIESTANMDNNQSQK;DKKS(0.991)PLIES(0.005)T(0.005)ANMDNNQSQK;DKKS(0.983)PLIES(0.008)T(0.008)ANMDNNQSQK;DKKS(0.999)PLIES(0.001)TANMDNNQSQK;DKKS(1)PLIESTANMDNNQSQK;DKKS(0.999)PLIESTANMDNNQSQK;DKKS(0.981)PLIES(0.01)T(0.01)ANMDNNQSQK;DKKS(1)PLIESTANMDNNQSQK;DKKS(0.999)PLIES(0.001)TANMDNNQSQK;DKKS(0.998)PLIES(0.001)T(0.001)ANMDNNQSQK;DKKS(1)PLIESTANMDNNQSQK 249.78 1.1119999999999996e-97 793759500.0 51107.22 53144.939999999995 58389.11999999999 52597.919999999984 74494.12999999999 54606.79000000001 54948.42000000001 56641.35999999999 77328.1 76022.75999999998 78470.89999999998 True False 59732.86928443578 55849.79044560797 66669.57520661732 65484.412761210304 63536.14215877736 60385.24427274645 64931.83665013088 64670.446236889984 59813.40881760123 58849.16571590007 58984.40984333594 1.0126891062076873 0.946856815113458 1.1302914682658243 1.1101986598685742 1.077168396319145 1.0237492319263881 1.100830487625314 1.0963989706543864 1.0140545438441637 0.9977071207833548 1.0 15.848046065992555 -8.88951972242024 7.111668296134586 1.0061642358904181 1.0627171923332266 0.2154732665961142 0.04970875566315578 0.26672670735749826 15.844505003824741 0.008971520432277478 0.009519964448759624 1.2896749891378702e-09 8.88951972242024 0.056552956442808444 DKKS(ph)PLIESTANMDNNQSQK ddPTM_A549_PD325901_60min_R1 8 DKKSPLIESTANMDNNQSQK 20 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 DKKS(1)PLIESTANMDNNQSQK;DKKS(0.871)PLIES(0.113)T(0.016)ANMDNNQSQK;DKKS(0.983)PLIES(0.008)T(0.008)ANMDNNQSQK;DKKS(1)PLIESTANMDNNQSQK;DKKS(0.999)PLIESTANMDNNQSQK;DKKS(1)PLIESTANMDNNQSQK;DKKS(0.695)PLIES(0.216)T(0.089)ANMDNNQSQK;DKKS(0.999)PLIEST(0.001)ANMDNNQSQK 285.28 9.920299999999996e-128 1353986000.0 26719.0 27788.0 29650.2 28078.4 33190.3 31601.000000000004 29843.0 31991.300000000003 30638.4 30270.999999999996 34738.5 True False 29431.493210511806 30129.792281994487 31662.44087313685 29812.738997326855 30859.127828319022 31343.651933278165 30978.691695716192 31353.208424810673 29350.774595906034 28359.68389391882 30465.884725495067 0.9660475471399115 0.9889682362245885 1.0392752798227605 0.9785614061743746 1.012907654130749 1.028811479321608 1.016832170634191 1.029125157772722 0.9633980716583009 0.9308669073439481 1.0 14.894907016197172 -8.76358809299447 24.999955470871402 0.9827157571425109 1.0082314332140034 0.26701753703499687 0.02748674251341709 70.6813611854612 822364.5717077145 0.004185140077595905 0.0045647961775544185 1.7235024575446185e-09 8.76358809299447 0.02551567607149252 DKKSPLIES(ph)TANMDNNQSQK ddPTM_A549_PD325901_60min_R1 1 DKKSPLIESTANMDNNQSQK 20 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 DKKS(0.458)PLIES(0.488)T(0.054)ANMDNNQSQK 233.5 1.3266999999999998e-76 153500000.0 5855.7 6107.0 6561.3 6138.2 7208.9 6289.1 6440.6 7454.8 7061.5 7484.8 7584.2 True False 6450.166353261494 6621.658322518368 7006.589274302117 6517.342673136349 6702.571733354899 6237.88365474446 6685.7005574315535 7306.108165822538 6764.729712027731 7012.208450636038 6651.391480204951 0.9697469127261087 0.9955297838392054 1.053402028004856 0.9798465016729895 1.0076946685971295 0.9378313805928996 1.0051581804091232 1.0984330402993228 1.0170397776405258 1.0542468401544107 1.0 12.699440470628183 -7.998073459054205 24.999492744308938 1.016800151221072 0.9921506850364527 0.19327761183996817 0.038087405600927625 126.6979942047204 1644054.497179903 0.005867426847669962 0.008073900205087109 1.0044458781844096e-08 7.998073459054205 -0.024649466184619384 DKLCS(ph)PLSEPGDPSK ddPTM_A549_PD325901_60min_R1 1 DKLCSPLSEPGDPSK 15 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 DKLCS(0.724)PLS(0.276)EPGDPSK 104.86 1.5141999999999998e-06 15421000.0 5714.7 6218.0 5994.7 6254.3 6562.4 6239.3 6530.6 6986.2 5733.9 5990.1 7857.6 True False 6294.852137060212 6742.012682072894 6401.536391059533 6640.613906454123 6101.479663050974 6188.489209433324 6779.125556681438 6846.854760432127 5492.924123174369 5611.884063723139 6891.165013430342 0.913467044366524 0.9783560064130286 0.9289483532295976 0.9636416909930449 0.8854061180017699 0.898032364247909 0.9837415797574797 0.9935699910085075 0.7970965885259008 0.8143592633155664 1.0 12.750532188784222 -6.748683349059655 24.72545103500136 0.913564088587364 0.9471816861596516 0.06475859475643087 0.06463131714676476 642.5408522320229 1245449.5555705405 0.011292397505355758 0.02337989710932082 1.78367880173316e-07 6.748683349059655 0.03361759757228755 DKLNNLVLFDK ddPTM_A549_MK2206_60min_R1 1 DKLNNLVLFDK 11 1 P62851 P62851 RPS25 40S ribosomal protein S25 0 64.55 0.0062122 2771300.0 797.92 931.71 720.78 784.76 1260.9 1027.9 580.73 764.25 1211.2 1500.7 1315.1 False True 932.5893887289704 979.13005934483 822.9974422876325 977.0262352292146 1075.4232803041298 1136.6716957352025 686.2411239091226 872.5847779174649 936.8651338889559 1161.6908277185844 988.5243750864477 0.9434156731313929 0.990496627115749 0.8325514909186335 0.9883683800349107 1.087907701021619 1.1498671397311768 0.6942075898220618 0.8827144781747605 0.9477410547484233 1.1751767149059862 1.0 9.949132730218611 -7.6032637246831145 0.004564574103258592 1.9108998578191116 1.309235923767661e-07 0.029061065023643917 0.13076970107920716 51438.81128443038 99.1871236049137 20539.495761999635 20980.94730836079 2.4930803478258327e-08 7.6032637246831145 -1.9108997268955192 DKLNNLVLFDK ddPTM_A549_PD325901_60min_R1 2 DKLNNLVLFDK 11 1 P62851 P62851 RPS25 40S ribosomal protein S25 0 ; 97.12100000000001 0.00028296 13579600.0 3642.6 3692.3999999999996 4120.0 4376.1 4127.9 4718.1 4138.4 4697.799999999999 4331.3 4687.9 4359.1 False True 4012.39407045961 4003.5715064789283 4399.607975572634 4646.40175815581 3837.9705444819147 4679.677357881069 4295.889076619374 4604.098693647193 4149.270523501482 4391.905193957981 3822.9583346116146 1.0495521319531307 1.0472443474552444 1.1508385889901682 1.2153942971570082 1.0039268567837596 1.2240984463558091 1.1237080555458905 1.2043287660143793 1.0853559365101002 1.1488237143981763 1.0 11.900473761377478 -9.75226310277956 1.018966923479446 1.0139523560903125 1.1260081496917826 0.0 0.08045379320487105 0.39939930036962207 0.8543988540956133 0.02133794068425157 0.013401331578119903 1.769036921797676e-10 9.75226310277956 0.11205579360147011 DKLNTQSTYS(ph)EA ddPTM_A549_PD325901_60min_R1 1 DKLNTQSTYSEA 12 1 Q5JWQ2;Q5JWQ6;E9PEP6;O14786 Q5JWQ2 NRP1 Neuropilin-1 1 DKLNTQST(0.001)YS(0.999)EA 150.21 2.8379e-12 13645000.0 8763.4 8582.1 9345.5 9558.2 10706.0 10459.0 9057.2 9943.4 11051.0 10378.0 11079.0 True False 9653.053916725898 9305.34368588257 9979.741829056817 10148.588305752804 9954.047493694952 10373.825371670397 9401.876702290012 9745.071086553598 10586.564900887699 9722.731308879442 9716.353235567447 0.9934852801965003 0.9576991964248124 1.0271077622543832 1.0444853186896426 1.0244633199683815 1.0676665535065382 0.9676343041825333 1.0029556203124674 1.0895615509463752 1.000656426661049 1.0 13.246199224403044 -5.845451141821867 6.045768175257087 1.0356034770144 0.9759473918630341 0.18796850201672466 0.03436108407201497 0.19844720236441526 11.127558064038638 0.00549422783462843 0.017667594262476504 1.4274104049637252e-06 5.845451141821867 -0.05965608515136589 DKLPET(ph)PR ddPTM_A549_PD325901_60min_R1 1 DKLPETPR 8 1 Q53HC0-2;Q53HC0 Q53HC0-2 CCDC92 Coiled-coil domain-containing protein 92 1 DKLPET(1)PR 45.879 0.017937 3026100.0 2457.0 2115.8 1785.2 1903.4 2515.7 2118.3 1952.6 2594.4 2213.0 2242.8 2156.7 True False 2706.4328312521984 2294.1058914007463 1906.3544072796776 2020.9686950649577 2339.0059106938534 2101.0492671201278 2026.9072615037178 2542.652656732573 2119.9953059147997 2101.1892252413586 1891.4395724477217 1.43088516845917 1.2128888095705495 1.0078854408299465 1.0684817662187387 1.2366273523964255 1.1108201909940738 1.0716214734159795 1.3442949453796789 1.1208369206166617 1.1108941865492423 1.0 10.885268970685868 -14.999999999999998 0.11269346331532755 0.4301657634342042 1.2647380653117228 0.11609798146621852 0.12262100786449279 98.28256266065117 0.7809629562496379 12.792366165071881 0.5651881620507523 1.000000000000004e-15 14.999999999999998 0.8345723018775186 DKLPSTEVKEDSAYGSQS(ph)VEQEAEK ddPTM_A549_MK2206_60min_R1 1 DKLPSTEVKEDSAYGSQSVEQEAEK 25 2 Q00653-4 Q00653-4 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit 1 DKLPSTEVKEDSAYGS(0.003)QS(0.997)VEQEAEK 124.08 4.7352e-18 4194600.0 831.04 1302.1 1002.5 1084.6 1519.6 1029.4 1097.5 1201.1 1500.7 1282.2 1226.9 True False 971.2992350227133 1368.3713282812282 1144.6695744795247 1350.3270486895442 1296.068853001947 1138.3304247395824 1296.9015437298947 1371.3596032144815 1160.7938461254591 992.5501294734258 922.2268692826111 1.0532107308674221 1.4837686624178141 1.2412017179351422 1.4642026747062216 1.4053687830741073 1.234327975745356 1.4062716961811559 1.4870089442104903 1.2586857798108033 1.07625375331508 1.0 9.84897788937413 -9.967543333439284 0.7910303544862687 1.0197103386343038 1.3501838023105477 0.4427147955271208 0.12837121534779106 0.32833474602509555 0.4176242551054089 0.053496744552553196 0.024809790541762945 1.0775977267803755e-10 9.967543333439284 0.33047346367624386 DKMEGS(ph)DFESSGGR ddPTM_A549_MK2206_60min_R1 2 DKMEGSDFESSGGR 14 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8;E9PEN0 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 DKMEGS(1)DFESSGGR;DKMEGS(0.999)DFESSGGR 84.375 5.6192e-05 97360000.0 4435.9 4817.1 4583.5 4165.7 6435.6 5066.9 5049.6 5377.5 6381.8 6654.1 6570.8 True False 5184.571472657458 5062.269814502346 5233.509221572965 5186.296687005379 5488.931765187766 5603.075994863988 5967.046956918889 6139.777092903066 4936.332489640473 5150.934188526848 4939.08901514564 1.0497019706992625 1.024939983664796 1.0596102247852772 1.0500512687869525 1.1113247297945112 1.1344351109450028 1.2081270328639617 1.243099096630074 0.9994418959656904 1.042891547961899 1.0 12.270029254705014 -8.90529251830994 24.97777885313871 0.9997108534875293 1.1085918857889945 0.2938308462991188 0.06524906386809712 12.981691160255966 3415.753855601252 0.012215698227544591 0.013004574961436914 1.2436766533048607e-09 8.90529251830994 0.10888103230146517 DKMEGS(ph)DFESSGGR ddPTM_A549_PD325901_60min_R1 2 DKMEGSDFESSGGR 14 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8;E9PEN0 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 DKMEGS(0.997)DFES(0.003)S(0.001)GGR;DKMEGS(1)DFESSGGR 82.755 8.1314e-05 133228000.0 29181.0 27243.0 27933.0 28151.0 33439.0 31201.0 27918.0 27133.0 30186.0 29963.0 29886.0 True False 32143.43363808319 29538.86321931682 29828.70135477438 29889.823334440294 31090.359998287444 30946.909400658587 28980.434767315804 26591.81102957328 28917.38739464265 28071.13106648243 26210.21146296315 1.2263706335793625 1.1269982793178637 1.1380564936274706 1.1403884847200372 1.1861926425973435 1.1807195620832254 1.1056925201945498 1.0145591945013246 1.1032870694502 1.0709997935785023 1.0 14.677841372870018 -14.999999998719993 0.06890291804901401 0.48818961405190897 1.322167219568243 0.539012679826062 0.045089024409337444 91.28253623577984 0.4711756350133501 7.437328028050717 1.0327233213206666 1.0000000029473256e-15 14.999999998719993 0.833977605516334 DKMNS(ph)PGLQTK ddPTM_A549_MK2206_60min_R1 2 DKMNSPGLQTK 11 1 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 DKMNS(0.999)PGLQT(0.001)K;DKMNS(0.999)PGLQT(0.001)K 63.037 0.0019364999999999999 14309000.0 4606.299999999999 4922.4 4538.4 4622.9 6622.0 4193.0 4016.5 4540.700000000001 6959.799999999999 6526.9 7324.900000000001 True False 5383.730826777439 5172.929134729681 5182.013363409353 5755.510707529869 5647.912572110358 4636.700476911859 4746.246059581888 5184.3581303105475 5383.416412516809 5052.468756871079 5505.925173044424 0.9778067550090915 0.9395204206651764 0.9411703211622164 1.0453303535084986 1.0257881091012766 0.8421292210093841 0.8620251656920935 0.9415961836335545 0.9777496502990295 0.9176421033846682 1.0 12.426769288127838 -8.947360277874688 3.112580702991325 0.9909986486319541 0.9462226073895451 0.0 0.06081699269815848 0.44713774586347704 8.449474116246934 0.011270877777768341 0.011600893958793077 1.1288590580001371e-09 8.947360277874688 -0.04477604124240897 DKMNS(ph)PGLQTK ddPTM_A549_PD325901_60min_R1 1 DKMNSPGLQTK 11 1 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 DKMNS(1)PGLQTK 61.409 0.0017754000000000001 13393000.0 2949.0 3193.2 3358.8 3303.7 3793.7 3317.6 3101.9 3917.1 3450.6 4214.0 4020.0 True False 3248.3803090609417 3462.302170536375 3586.7483661051847 3507.7620457529165 3527.2435995545047 3290.5825655467725 3219.9445019248096 3838.9703675944984 3305.5832817847304 3947.927320834259 3525.5654848796057 0.9213785201246575 0.9820558390945925 1.0173540617776011 0.9949501890680957 1.0004759845426487 0.9333488711695686 0.913312918377055 1.0888949259513172 0.9376037109398955 1.1197997421310346 1.0 11.783638962542566 DKNNMQHR ddPTM_A549_MK2206_60min_R1 1 DKNNMQHR 8 1 P31942-4;P31942-3;P31942-2;P31942 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 51.854 0.011098 1623100.0 165.44 200.67 99.99 238.8 369.38 189.24 236.99 363.73 256.91 404.29 311.7 False True 193.36222738033987 210.88324586912978 114.17008553836175 297.3060107201396 315.0446913147272 209.26525119265452 280.048015351752 415.2898413764078 198.72029520096743 312.9606082084007 234.29628751763804 0.8252893352643643 0.9000707954164844 0.48728934951548014 1.2689318037007231 1.3446422675007614 0.8931650322325352 1.1952729525459072 1.7724985990021052 0.8481581048782414 1.3357471922590354 1.0 7.8721902842987515 -6.267248695349843 24.968582484373115 1.0517135089999714 0.7538019253406463 0.23766445515722667 0.28929183436468325 634.7409190291403 2728137.2082498264 0.042189075107717466 0.10050599464033315 5.40444752842506e-07 6.267248695349843 -0.29791158365932513 DKNNMQHR ddPTM_A549_PD325901_60min_R1 2 DKNNMQHR 8 1 P31942-4;P31942-3;P31942-2;P31942 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 ; 66.071 0.0033881000000000002 4289100.0 288.94100000000003 323.32 359.18 250.74 291.87 326.48 105.15 165.969 259.59 400.57 542.81 False True 318.2740776128783 350.56731109163854 383.5561147248008 266.2276403281431 271.3700580968378 323.8212551240989 109.1515407902878 162.65861809483826 248.68033504854174 375.2779418382963 476.0478111560937 0.6685758660247632 0.7364119797973177 0.8057092286451762 0.5592455927517086 0.5700479064021091 0.6802284298665109 0.22928692923765498 0.34168546579348374 0.5223852084197499 0.7883198557870157 1.0 8.894962665521982 -10.6357160763341 0.9927061575870565 0.9910912687127691 0.5685272001504664 0.3352956795652997 0.16888043999732358 0.3772188746118956 0.6824303165155315 0.10673125956502934 0.03127427151363341 2.3135768161510046e-11 10.6357160763341 -0.42256406856230266 DKNS(ph)IYSGLEAFGDVK ddPTM_A549_PD325901_60min_R1 1 DKNSIYSGLEAFGDVK 16 1 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 DKNS(1)IYSGLEAFGDVK 124.31 1.1866e-08 3119500.0 1956.5 1937.5 2195.8 2162.5 2362.8 2259.1 2292.6 2363.8 2303.7 2169.7 2245.3 True False 2155.122439700825 2100.7799246568406 2344.820192418058 2296.0727136061637 2196.845079217487 2240.7026386022167 2379.846147558857 2316.6521546347735 2206.883500332548 2032.7047717166804 1969.1423341293978 1.0944472638407081 1.0668502160792976 1.1907824801576652 1.1660267893337986 1.1156354932508024 1.137907910345588 1.208569896807912 1.1764777560678557 1.120733357910494 1.0322792499483715 1.0 10.943351680980811 -10.195594494642457 0.7902057113093882 1.0050605405738546 1.1439838231222215 0.5783875575149352 0.04109738862597505 0.3108346990810194 0.3766244238404228 0.023001607156917226 0.008727984788987932 6.373903813008563e-11 10.195594494642457 0.13892328254836683 DKPAQIR ddPTM_A549_PD325901_60min_R1 2 DKPAQIR 7 1 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 ; 51.995 0.048921 12655400.0 5551.9 5639.700000000001 5935.6 5272.700000000001 6583.0 5544.2 5055.2 5684.3 5368.3 6128.0 6689.9 False True 6115.524800907236 6114.9773115288735 6338.425509662366 5598.382703829467 6120.632790117115 5499.049873373654 5247.578402311586 5570.922177252915 5142.689019766119 5741.077034188977 5867.084710770163 1.042344725256994 1.0422514098532882 1.080336457052847 0.954201785011312 1.0432153431978775 0.9372712589745108 0.8944098578768849 0.9495213469521611 0.8765322597653522 0.9785229491658993 1.0 12.518428106895628 -6.907993198443452 1.2524759305366944 0.9370545291236791 1.0476424777507722 0.5101463034521163 0.04408780011192497 0.3218919892944299 0.9999121423793608 0.008388154835362389 0.021451098536136914 1.2359667899699467e-07 6.907993198443452 0.11058794862709309 DKPASSMS(ph)DDEMPVLEIPR ddPTM_A549_MK2206_60min_R1 3 DKPASSMSDDEMPVLEIPR 19 1 Q96PN7 Q96PN7 TRERF1 Transcriptional-regulating factor 1 1 DKPAS(0.031)S(0.031)MS(0.938)DDEMPVLEIPR;DKPAS(0.141)S(0.141)MS(0.717)DDEMPVLEIPR;DKPAS(0.055)S(0.055)MS(0.89)DDEMPVLEIPR 80.683 6.8864e-05 5316700.0 2328.68 2832.16 2890.3500000000004 2017.4099999999999 3528.2200000000003 2771.61 2422.3199999999997 2553.42 4182.200000000001 3501.0 3888.4000000000005 True False 2721.7042532401456 2976.3048468665706 3300.2450918672266 2511.675540564977 3009.223511804773 3064.8999305541806 2862.4241889820496 2915.375104520789 3234.93837760105 2710.121668449902 2922.802965619452 0.9311966236709062 1.0183049907491042 1.129137040945824 0.8593379608921596 1.0295676948469925 1.0486166760490516 0.9793421666298994 0.99745865144314 1.1067931761576835 0.927233789047263 1.0 11.513136860947727 DKPASSMS(ph)DDEMPVLEIPR ddPTM_A549_PD325901_60min_R1 3 DKPASSMSDDEMPVLEIPR 19 1 Q96PN7 Q96PN7 TRERF1 Transcriptional-regulating factor 1 1 DKPAS(0.006)S(0.006)MS(0.989)DDEMPVLEIPR;DKPAS(0.057)S(0.057)MS(0.886)DDEMPVLEIPR;DKPAS(0.051)S(0.192)MS(0.756)DDEMPVLEIPR 94.384 8.5887e-07 6543600.0 3364.26 3782.24 3971.2 4225.9 4064.2000000000003 4147.9 4075.07 4571.8 4226.4 4334.7 5030.0 True False 3705.7971985626896 4100.982638572432 4240.709512765548 4486.9242452847575 3778.7446127288435 4114.120877631863 4230.149018813869 4480.611862492283 4048.7791057019053 4061.006302235472 4411.341887797119 0.8400612087704779 0.9296451607880997 0.9613196212464097 1.0171336430977427 0.8565975408031288 0.9326234470768533 0.9589256798516399 1.0157026991915503 0.9178112258543929 0.9205829893777303 1.0 12.107001861169165 -14.9970701812966 0.008483711000570913 2.0252945830121405 1.1171309274557773e-05 0.0922301232371685 0.05301536167472987 17714.815727003974 11.711990215379181 1582.8257002242 1233.6288855152247 1.0067689634446209e-15 14.9970701812966 -2.025283411702866 DKPHVNVGTIGHVDHGK ddPTM_A549_MK2206_60min_R1 2 DKPHVNVGTIGHVDHGK 17 1 P49411;H3BNU3 P49411 TUFM Elongation factor Tu, mitochondrial 0 ; 99.044 1.3792e-07 54514000.0 2436.0 2393.75 2598.71 1831.6999999999998 3271.5 2636.2 2521.9 2101.88 3738.6000000000004 3113.0 2930.6 False True 2847.1372455180613 2515.581650467084 2967.246154509411 2280.466582228138 2790.266683729844 2915.160934232063 2980.0965859976527 2399.827926737536 2891.8130693174135 2409.771137927602 2202.8511395546657 1.2924782770812404 1.141966247876214 1.3470025737232874 1.035234084264615 1.2666614795831967 1.323358116164581 1.3528361188310332 1.0894190186735413 1.3127591862162915 1.0939328103735453 1.0 11.10515629105701 -10.887571225578125 1.0053683149379633 0.992306775332485 1.2423442113856074 0.3235038292662461 0.10509945937620593 0.42385418181609197 0.7207218032853097 0.07934627686923608 0.01677870766737775 1.2954742184946817e-11 10.887571225578125 0.25003743605312234 DKPHVNVGTIGHVDHGK ddPTM_A549_PD325901_60min_R1 2 DKPHVNVGTIGHVDHGK 17 1 P49411;H3BNU3 P49411 TUFM Elongation factor Tu, mitochondrial 0 ; 101.67 3.0407e-09 46897000.0 1692.0 2451.3 2250.0 2093.1 2874.5 2229.0 2153.4 2067.7 2350.5 2217.6000000000004 2309.1000000000004 False True 1863.7705944154336 2657.879653838099 2402.6985303491333 2222.386033225 2672.605036486656 2210.8477630225957 2235.3488153856933 2026.45810142073 2251.7166590839306 2077.5803575420177 2025.0953385909195 0.9203372102531542 1.3124713702059463 1.1864619332050577 1.0974229167755418 1.3197428217608165 1.0917252738139847 1.1038239893145327 1.0006729376162402 1.111906494560743 1.0259173076698789 1.0 10.983774114276423 -7.642350244826533 2.8978329443341284 1.0520401236253596 1.1739699308524765 0.21304056237564684 0.10642578457409554 0.2932764865656182 4.979180913688317 0.015703777685559826 0.024044427664888957 2.278503789270768e-08 7.642350244826533 0.12192980722711688 DKPRS(ph)PFSK ddPTM_A549_MK2206_60min_R1 4 DKPRSPFSK 9 2 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 DKPRS(1)PFSK;DKPRS(0.924)PFS(0.076)K;DKPRS(0.999)PFS(0.001)K;DKPRS(0.774)PFS(0.226)K 78.548 0.00037469 298301000.0 30200.4 29323.0 28843.7 26073.3 39186.6 33248.0 30098.2 30722.399999999998 42695.8 45222.2 46019.2 True False 35297.48919110988 30815.415451340483 32934.1703794664 32461.25967047492 33422.303050175105 36766.281291763786 35566.65334258875 35077.39428340402 33025.269471182386 35006.47361181806 34591.36257469261 1.020413379637548 0.8908413302540834 0.9520923123034584 0.938420959867707 0.9662037156821107 1.0628746182627211 1.0281946328592926 1.0140506667715656 0.954725891467022 1.012000424563476 1.0 15.078124223009777 -7.004957451560088 24.15495264081533 0.991434987512025 0.9470538779259972 0.28384299931175716 0.03983100184926208 181.19430303617312 882873.5740355273 0.006081075133060204 0.011266455754457429 9.886499493354452e-08 7.004957451560088 -0.04438110958602781 DKPRS(ph)PFSK ddPTM_A549_PD325901_60min_R1 8 DKPRSPFSK 9 2 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 DKPRS(1)PFSK;DKPRS(0.999)PFS(0.001)K;DKPRS(0.999)PFS(0.001)K;DKPRS(0.998)PFS(0.002)K;DKPRS(0.999)PFS(0.001)K;DKPRS(0.998)PFS(0.002)K;DKPRS(0.991)PFS(0.009)K;DKPRS(0.998)PFS(0.002)K 100.04 0.00016208 489386000.0 73979.5 69615.2 72116.90000000001 74434.59999999999 88396.40000000001 80029.5 76399.3 79320.59999999999 85168.8 84599.2 83988.3 True False 81489.84437917042 75481.9172185657 77011.18650814929 79032.25618875808 82187.74181502497 79377.76628569621 79306.71716880116 77738.48840719323 81589.45151848021 79257.59207421013 73658.2715456999 1.1063230601143221 1.0247581925912332 1.0455198702343855 1.0729583321775884 1.1157978607200023 1.0776490490473667 1.0766844714730617 1.0553938719422955 1.107675347335018 1.0760175389811617 1.0 16.168559923112046 -10.947017417770795 1.1749408223387745 0.9994756566016078 1.0770735058202379 0.0 0.03407432699180901 0.31708827198693557 0.7693168937954675 0.020113159620648576 0.004565369404608714 1.1297506041001351e-11 10.947017417770795 0.07759784921863011 DKPTYDEIFYT(ph)LSPVNGK ddPTM_A549_MK2206_60min_R1 1 DKPTYDEIFYTLSPVNGK 18 1 A0A024R571;Q9H4M9 A0A024R571 EHD1 EH domain-containing protein 1 1 DKPTYDEIFY(0.001)T(0.567)LS(0.433)PVNGK 85.35 2.7288e-05 59810000.0 2129.5 2178.6 1822.2 1893.8 2957.8 2162.9 2314.0 2567.8 3735.5 3074.9 3294.9 True False 2488.907538723608 2289.4814344470346 2080.6153602160493 2357.7810850159126 2522.7115381739673 2391.7766423831777 2734.42384709884 2931.7935135576918 2889.4152143677293 2380.277954389203 2476.6853953861582 1.004934879238283 0.9244135079538695 0.8400806029268184 0.9519905472888266 1.01858376638129 0.9657167789008818 1.1040658826481655 1.1837569353860442 1.1666460422266185 0.9610740059369052 1.0 11.274194904420241 -7.356561495672316 1.4808636395878354 1.0907363601769362 0.928753753347589 0.4209797648203776 0.07528776549523518 0.2836181215101315 1.22118006371473 0.013204407240037564 0.024852101968669073 4.399856418898743e-08 7.356561495672316 -0.16198260682934718 DKPTYDEIFYTLS(ph)PVNGK ddPTM_A549_MK2206_60min_R1 1 DKPTYDEIFYTLSPVNGK 18 1 A0A024R571;Q9H4M9 A0A024R571 EHD1 EH domain-containing protein 1 1 DKPTYDEIFYT(0.101)LS(0.898)PVNGK 110.18 7.242699999999999e-10 68511000.0 1814.3 2101.4 1937.2 1682.6 3073.1 2711.2 2035.8 2231.5 3601.0 3040.1 2998.5 True False 2120.5094846237353 2208.352284194893 2211.924089458088 2094.8370755347855 2621.051060910955 2998.097384451095 2405.678508177968 2547.821958682136 2785.379249615364 2353.339298558851 2253.8896956100007 0.9408222100460125 0.9797960780850088 0.9813808074842123 0.9294319414188685 1.1629012129635672 1.3301881588485098 1.0673452710945053 1.1304111126842808 1.2358099223047911 1.044123544795716 1.0 11.138201197026529 -6.761522418642217 24.999999998399993 1.131635781671444 0.961104983269592 0.5008815579452479 0.08662826921518435 1.8641766940820554 561474.6618135532 0.015253987430987891 0.030203646453384015 1.7317196356355104e-07 6.761522418642217 -0.17053079840185192 DKPTYDEIFYTLS(ph)PVNGK ddPTM_A549_PD325901_60min_R1 2 DKPTYDEIFYTLSPVNGK 18 1 A0A024R571;Q9H4M9 A0A024R571 EHD1 EH domain-containing protein 1 1 DKPTYDEIFYT(0.1)LS(0.9)PVNGK;DKPTYDEIFYT(0.033)LS(0.967)PVNGK 115.66 1.4874e-10 253470000.0 4991.1 6140.0 5385.2 5561.3 6609.7 5530.3 5566.9 5544.6 6950.7 5884.799999999999 6474.9 True False 5497.792797746377 6657.439348331875 5750.672055838288 5904.808870371308 6145.457474227119 5485.263070365123 5778.751425824565 5434.008603345443 6658.586250710351 5513.232723693751 5678.528347772872 0.9681721145061503 1.1723881506980474 1.0127046487482467 1.0398484446568246 1.082227136655464 0.9659656048941716 1.0176494809770564 0.9569395925401464 1.172590122460489 0.9708911158039829 1.0 12.471301372761005 -8.74939324545027 24.999323385803866 1.0815008997830993 1.0312823181048518 0.0 0.07631322620773533 465.6025008021261 966263.4512742365 0.013709201686091636 0.01548485344204028 1.7807655876024692e-09 8.74939324545027 -0.05021858167824744 DKQPGETNDANT(ph)PKK ddPTM_A549_PD325901_60min_R1 2 DKQPGETNDANTPKK 15 2 Q9NQB0-13;E2GH26;A0A0D9SGH8;Q9NQB0-7 Q9NQB0-13 TCF7L2 Transcription factor 7-like 2 1 DKQPGET(0.006)NDANT(0.994)PKK;DKQPGET(0.002)NDANT(0.998)PKK 54.368 0.005543 8554400.0 2001.48 1828.39 1898.5900000000001 2018.06 2082.9700000000003 1967.49 2090.3999999999996 2151.2 2518.4 2299.15 2231.8 True False 2204.6687761883004 1982.4748420352626 2027.4397345491377 2142.710982853204 1936.6693730563957 1951.4674137592306 2169.9513159107723 2108.2926284162477 2412.560405971908 2153.981276624607 1957.302748545846 1.126381076114174 1.0128606029435752 1.0358334887412788 1.0947263955180693 0.9894582606064495 0.9970186856422949 1.1086436768777395 1.077141811598935 1.2325943994940436 1.1004844693672866 1.0 10.934651208764098 -7.7927991235364305 21.695274006343006 1.109572772615972 1.0409870612590877 0.1853879500839144 0.0631462165834281 78.2467111187411 54131.98073866847 0.01391150498919676 0.019224027989305937 1.6113907877159538e-08 7.7927991235364305 -0.0685857113568844 DKRNS(ph)SDSAIDNPKPNK ddPTM_A549_PD325901_60min_R1 2 DKRNSSDSAIDNPKPNK 17 3 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 DKRNS(0.842)S(0.158)DSAIDNPKPNK;DKRNS(0.856)S(0.132)DS(0.012)AIDNPKPNK 108.92 2.2250999999999997e-09 10371900.0 2730.3 2752.7 2996.1000000000004 2470.46 3065.3 3051.1 2336.7 2416.3 3117.0 3258.1000000000004 3205.6 True False 3007.4780460593724 2984.6796896014885 3199.4333630129067 2623.05470337826 2850.003902710923 3026.252853188981 2425.6243971913036 2368.105000949321 2986.003329659482 3052.3830099691745 2811.3315219726505 1.06976997289494 1.0616605214554002 1.1380491194321805 0.9330293075993112 1.013755894826355 1.0764482344172361 0.8628026891290628 0.8423428480208812 1.0621313446392362 1.0857428183451603 1.0 11.45703787601971 -6.254083823818714 24.87446968392549 1.001765192610647 1.0870099317690272 0.23890972681123068 0.07943909088616728 745.6460106247387 2521558.106834368 0.011404993500539903 0.029505415437008697 5.570782160663239e-07 6.254083823818714 0.08524473915838016 DKRPLS(ph)GPDVGTPQPAGLASGAK ddPTM_A549_MK2206_60min_R1 7 DKRPLSGPDVGTPQPAGLASGAK 23 2 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(0.991)GPDVGT(0.009)PQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(0.994)GPDVGT(0.006)PQPAGLASGAK;DKRPLS(0.952)GPDVGT(0.048)PQPAGLASGAK 228.47 3.1024999999999994e-88 1243710300.0 21329.800000000003 24452.800000000003 23969.4 22254.63 30772.3 21554.1 20235.08 22680.600000000002 31554.1 29228.4 32602.199999999997 True False 24929.748776457793 25697.343073646585 27368.621345166604 27707.01534904832 26245.735433819307 23834.94055554637 23911.532108881933 25895.644506424396 24407.146731543515 22625.684139994595 24506.17396505466 1.0172844121651607 1.0486068984203945 1.1168051522115914 1.1306136726425757 1.0709846209059493 0.972609620315866 0.9757350185703948 1.0566987953056686 0.9959590904050402 0.9232646504614875 1.0 14.580857640069585 -7.1831952541253825 6.313975731725009 0.9995249348643164 1.0811803829449413 0.5199715597392847 0.04188757767462611 0.14172808259810402 9.357931923226023 0.005247814534584852 0.009133363044342186 6.558503367558579e-08 7.1831952541253825 0.08165544808062497 DKRPLS(ph)GPDVGTPQPAGLASGAK ddPTM_A549_PD325901_60min_R1 4 DKRPLSGPDVGTPQPAGLASGAK 23 2 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(0.997)GPDVGT(0.003)PQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK 262.14 4.2411999999999985e-124 2242440000.0 54278.0 53929.0 59920.0 55671.0 65210.0 61220.0 65893.0 65973.0 57755.0 61037.0 64479.0 True False 59788.2626026483 58473.78609384196 63986.531528231164 59109.67123198555 60629.87456228729 60721.4446174263 68400.59417303302 64657.11676018274 55327.758198422634 57183.11340336042 56548.49176605768 1.0572919053260275 1.0340467847621695 1.1315338310514949 1.0452917378685098 1.0721749187071934 1.0737942378486807 1.2095918394429994 1.143392418451594 0.978412623758645 1.011222609436308 1.0 15.78720092541536 -8.773905063641692 24.999805101685123 0.9898059509353734 1.0955928793637888 0.4507345718470115 0.048685814843901866 140.18657685373367 281141.98067155044 0.008785714591761345 0.009384271085530194 1.6830419322172859e-09 8.773905063641692 0.10578692842841542 DKRPLSGPDVGT(ph)PQPAGLASGAK ddPTM_A549_MK2206_60min_R1 2 DKRPLSGPDVGTPQPAGLASGAK 23 2 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 DKRPLS(0.012)GPDVGT(0.988)PQPAGLASGAK;DKRPLS(0.459)GPDVGT(0.541)PQPAGLASGAK 72.425 6.469e-05 55299000.0 2951.9 3911.8 4289.1 3700.9 5358.1 3748.5 3574.8 3627.6 5500.0 4820.2 5453.8 True False 3450.10855297404 4110.893911351283 4897.3588747133435 4607.620666139716 4569.930587832152 4145.1637819470825 4224.294887039298 4141.823409059074 4254.258781695225 3731.3134722257078 4099.470942777332 0.8415984894471873 1.0027864494549172 1.1946319276495356 1.123954951859744 1.1147610634693486 1.011146033185149 1.0304487935161213 1.0103312029461657 1.0377580036737681 0.910193906557561 1.0 12.001222019397403 -7.3244034357740135 24.99274854352825 1.0182541974987103 1.0641432273463851 0.0635540512271019 0.09000524179001974 521.8602696746757 207144.1779877799 0.012787185038299615 0.020441735807363203 4.738016450024165e-08 7.3244034357740135 0.045889029847674845 DKRPLSGPDVGT(ph)PQPAGLASGAK ddPTM_A549_PD325901_60min_R1 2 DKRPLSGPDVGTPQPAGLASGAK 23 2 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 DKRPLS(0.004)GPDVGT(0.996)PQPAGLASGAK;DKRPLS(0.009)GPDVGT(0.991)PQPAGLASGAK 127.53 2.4788e-22 36278000.0 4629.4 4852.5 4275.6 5809.4 5222.2 5241.8 5235.4 5799.1 6632.9 5688.9 6355.7 True False 5099.373280015846 5261.437204850229 4565.767927271448 6168.233443895329 4855.410687611974 5199.112518713252 5434.636011920807 5683.432401194061 6354.142279531081 5329.70188312625 5573.989192101818 0.9148516626550892 0.9439266965758624 0.8191203409114982 1.1066102267717954 0.8710836207741398 0.9327453533781954 0.9749993809857991 1.0196346288663998 1.1399631503654004 0.9561737024316955 1.0 12.444494489738142 -8.235879685792163 2.4491885255160994 1.0660754029898503 0.9333843501956094 0.20725425342875015 0.0799887193200741 0.23575190649932076 2.786286934656589 0.01315314986124472 0.01694656864385865 5.809253311257794e-09 8.235879685792163 -0.13269105279424087 DKRPLSGPDVGTPQPAGLASGAK ddPTM_A549_MK2206_60min_R1 2 DKRPLSGPDVGTPQPAGLASGAK 23 2 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 0 ; 71.592 8.0477e-05 5946900.0 2438.3 3055.4 2969.1000000000004 2747.4 3746.2 2810.8999999999996 2698.3 2484.6000000000004 4128.9 3643.2 4327.6 False True 2849.8254292884594 3210.906809331435 3390.1630260221027 3420.513123335472 3195.13894256113 3108.3475722755893 3188.5461826390692 2836.799658768378 3193.71074249844 2820.1985896877127 3252.937484316107 0.8760775277818174 0.9870791630065683 1.0421851149515238 1.0515151735400152 0.9822318928557188 0.9555509711644777 0.9802051831652168 0.8720732176520086 0.9817928435135239 0.8669698090680114 1.0 11.667527381269911 -6.9808243508501615 24.99676127993585 0.9777164030109832 0.9958488798730007 0.0 0.06332013523501188 1013.3561803271423 1320972.4627110646 0.008020554676306753 0.015155788977454072 1.045142838756282e-07 6.9808243508501615 0.018132476862017577 DKS(ph)FDDEESVDGNRPSSAASAFK ddPTM_A549_MK2206_60min_R1 4 DKSFDDEESVDGNRPSSAASAFK 23 2 E7ERI8;E7EW49;O75122-3 E7ERI8 CLASP2 CLIP-associating protein 2 1 DKS(1)FDDEESVDGNRPSSAASAFK;DKS(0.978)FDDEES(0.012)VDGNRPS(0.003)S(0.003)AAS(0.004)AFK;DKS(1)FDDEESVDGNRPSSAASAFK;DKS(1)FDDEESVDGNRPSSAASAFK 210.21 5.5769e-74 61301300.0 12175.9 13461.400000000001 11888.400000000001 10602.1 16242.6 13705.3 12593.0 14370.099999999999 17790.4 17808.3 20374.3 True False 14230.894247825672 14146.527761711784 13574.353884531052 13199.61497594636 13853.335056442116 15155.585749158152 14880.985093567719 16407.105681585548 13760.902805431042 13785.392661598502 15314.799007926253 0.9292250091209424 0.923716188138687 0.8863553401847178 0.861886268903355 0.9045717837545404 0.9896039602814442 0.9716735483022656 1.0713236049062065 0.8985362980153391 0.900135395473607 1.0 13.902638812619468 -7.202114152268483 7.766723352207483 0.9648662482675223 0.8991806252856221 0.348744456453128 0.047577291962564175 0.3304060617810734 39.32641947684032 0.007682631224823428 0.013323069451318606 6.278932983118441e-08 7.202114152268483 -0.06568562298190017 DKS(ph)FDDEESVDGNRPSSAASAFK ddPTM_A549_PD325901_60min_R1 4 DKSFDDEESVDGNRPSSAASAFK 23 2 E7ERI8;E7EW49;O75122-3 E7ERI8 CLASP2 CLIP-associating protein 2 1 DKS(1)FDDEESVDGNRPSSAASAFK;DKS(1)FDDEESVDGNRPSSAASAFK;DKS(1)FDDEESVDGNRPSSAASAFK;DKS(1)FDDEESVDGNRPSSAASAFK 206.32 3.8235e-62 123384000.0 22360.5 21230.1 21932.799999999996 21222.4 25624.399999999998 22970.5 22774.4 23325.100000000002 24701.699999999997 25378.5 25284.5 True False 24630.521499069917 23019.235034042427 23421.291700640664 22533.259448432593 23824.630543380987 22783.43586384501 23641.092254629868 22859.86258231304 23663.57345147566 23776.097178878103 22174.666791651336 1.1107504672107722 1.0380870770382473 1.0562184280243019 1.0161712759948331 1.074407600674787 1.0274533582810306 1.0661306650853772 1.0308999362696027 1.0671444885198857 1.072218915498189 1.0 14.436624805534912 -10.87385879260101 0.9590815776136729 0.9978039918049961 1.0532048950435047 0.0 0.03279611804206767 0.4813776980885516 0.7328397007969997 0.019456113703484396 0.003999927361036169 1.3370301706136248e-11 10.87385879260101 0.05540090323850855 DKS(ph)HS(ph)HT(ph)PSRR ddPTM_A549_PD325901_60min_R1 1 DKSHSHTPSRR 11 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 DKS(0.999)HS(0.988)HT(0.922)PS(0.091)RR 46.3 0.017137 15375000.0 2134.2 2133.0 1451.5 1490.5 2008.0 1887.2 1537.0 1436.0 1640.7 2350.2 2928.9 True False 2350.862412884999 2312.755395764152 1550.0075185785624 1582.5647998288962 1866.9650072239358 1871.8312688991664 1595.4913760786724 1407.3578534797928 1571.7470846879414 2201.8079709123576 2568.663867826833 0.9152082692991275 0.9003729233443115 0.6034294864317593 0.6161042788240696 0.7268234005266887 0.728717872487844 0.6211366913602853 0.5478949079742612 0.6118928616447145 0.8571802634399001 1.0 11.326802397965432 -10.80765941745113 1.0733361982388079 0.9986404128558117 0.688978171628596 0.33601331429047354 0.12023242129239219 0.3620561056497575 0.7456163989314775 0.08306766889334412 0.021065541292726107 1.5571863300250995e-11 10.80765941745113 -0.30966224122721575 DKS(ph)HSHT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 DKSHSHTPSR 10 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 DKS(0.995)HS(0.029)HT(0.904)PS(0.073)R;DKS(0.987)HS(0.038)HT(0.768)PS(0.207)R 59.185 0.021347 12781900.0 2097.44 1742.49 2071.2200000000003 1684.38 1987.12 1034.57 1116.81 1878.65 1585.75 2571.0 2862.6 True False 2310.370564746282 1889.335747569188 2211.7854444576597 1788.4203270954697 1847.5515463918462 1026.1448049305905 1159.310815691881 1841.1788519775857 1519.1064420941682 2408.6666212303953 2510.5183475165054 0.9202763114763862 0.7525679903666852 0.8810074806446394 0.7123709447750657 0.7359243353945253 0.40873822170855256 0.4617814551479828 0.7333859375291744 0.6050967297637648 0.9594300012239044 1.0 11.293769553294373 -4.865141595493787 1.053369330853778 0.7430510632913372 1.13813956098845 0.08821760208147034 0.17615639983271528 9.952627249213185 4.941474361169824 0.03141922763961329 5.372802017741294 1.3641383063265168e-05 4.865141595493787 0.39508849769711274 DKS(ph)HSHTPSR ddPTM_A549_MK2206_60min_R1 2 DKSHSHTPSR 10 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DKS(0.989)HS(0.011)HTPSR;DKS(0.867)HS(0.132)HT(0.001)PSR 72.958 0.00079334 10257100.0 680.19 555.08 451.83 451.0 698.97 519.89 632.28 545.74 898.1700000000001 651.5799999999999 905.48 True False 794.9894429511207 583.3312010616262 515.9062881167915 561.495020246159 596.1524389199599 574.9044147249479 747.1570916351145 623.1003162586553 694.7359290827636 504.3876254580366 680.6243260233266 1.1680297229398096 0.8570531183771325 0.7579897873046492 0.8249705436283734 0.8758905847563379 0.8446721528217087 1.097752553160299 0.9154834648641403 1.0207333216282273 0.7410661155839294 1.0 9.410714905000727 -7.744910969043179 24.9969880329915 1.007463444291458 0.8773509750120897 0.0 0.13169481986810105 243.58317509136404 368385.7261817905 0.015261200871050689 0.02260146466464422 1.7992397239039018e-08 7.744910969043179 -0.13011246927936837 DKS(ph)NVFR ddPTM_A549_MK2206_60min_R1 2 DKSNVFR 7 1 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 DKS(1)NVFR;DKS(1)NVFR 50.353 0.014609 3480800.0 1534.6399999999999 1598.12 1510.4099999999999 1772.47 2109.34 1830.0300000000002 1811.3600000000001 1657.4299999999998 2670.4 2705.3999999999996 2674.0299999999997 True False 1793.6497136542846 1679.4574818775795 1724.6088498649565 2206.7252295692024 1799.0588802258014 2023.6825599244023 2140.460665376386 1892.375778166494 2065.5586637525344 2094.2482610180978 2009.9945515264335 0.8923654605392577 0.8355532509290451 0.8580166789781848 1.097876224536712 0.8950565954815932 1.0068099728865303 1.0649086903001173 0.9414830387124098 1.0276439118623004 1.0419173820285632 1.0 10.97297587537154 -6.236851495557551 24.499868749496084 1.007575932392583 0.8593358961302447 0.5987650180666422 0.053740462148608725 279.2411069376909 278240.97278775065 0.006630870699512425 0.017533629665822194 5.796268625388702e-07 6.236851495557551 -0.14824003626233828 DKS(ph)PGRPLER ddPTM_A549_MK2206_60min_R1 2 DKSPGRPLER 10 2 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 DKS(1)PGRPLER;DKS(1)PGRPLER 86.49799999999999 0.00015588 390480000.0 7184.299999999999 7766.5 7575.099999999999 6822.6 10456.900000000001 7913.5 7188.2 7929.5 11130.1 10679.1 12430.1 True False 8396.834200728821 8161.7816765963835 8649.36308592503 8494.137306278151 8918.70386217167 8750.90131744384 8494.202894432105 9053.530908075292 8609.150121117464 8266.683893042939 9343.363116692308 0.8986950518628058 0.8735378872319561 0.9257226737204061 0.9091091933591899 0.9545496360125438 0.9365900916137991 0.9091162131178288 0.9689798839029152 0.9214187668396252 0.8847653451757819 1.0 13.189726222010952 -14.999999999999998 0.13062260685475655 1.263673061472879 0.886509831852843 0.0 0.039497459810599614 32.87945184254138 0.2935449042430902 2.284013800083946 0.06502667282596954 1.000000000000004e-15 14.999999999999998 -0.377163229620036 DKS(ph)PGRPLER ddPTM_A549_PD325901_60min_R1 3 DKSPGRPLER 10 2 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 DKS(1)PGRPLER;DKS(1)PGRPLER;DKS(1)PGRPLER 96.67299999999999 0.00010916 542514200.0 14364.359999999999 15382.899999999998 15234.82 14861.56 17017.989999999998 16017.63 16073.160000000002 17552.01 17069.949999999997 17003.66 15992.47 True False 15822.619252717064 16679.270969292244 16268.746499614917 15779.524808148357 15822.705091278323 15887.187731908292 16684.832899370645 17201.921391264535 16352.559363850136 15930.046005737237 14025.497574620038 1.1281324722018435 1.1892106415871024 1.159940773085596 1.1250598935400578 1.1281385923812384 1.1327361220080414 1.1896072000727327 1.2264749467706888 1.1659165228790922 1.1357918619987921 1.0 13.775764332964858 -10.567359066160432 0.8623385326732749 0.9998528492103284 1.1607531816242802 0.19548170510017449 0.04946332817721075 0.22996789576077145 0.305921572852476 0.023037131590861164 0.006403171163240542 2.7079518246427087e-11 10.567359066160432 0.16090033241395185 DKS(ph)PSSLLEDAK ddPTM_A549_MK2206_60min_R1 6 DKSPSSLLEDAK 12 1 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 DKS(0.89)PS(0.108)S(0.002)LLEDAK;DKS(0.975)PS(0.012)S(0.013)LLEDAK;DKS(0.675)PS(0.269)S(0.056)LLEDAK;DKS(0.905)PS(0.067)S(0.028)LLEDAK;DKS(0.661)PS(0.276)S(0.063)LLEDAK;DKS(0.993)PS(0.006)S(0.001)LLEDAK 98.694 6.983199999999999e-05 118018300.0 10683.0 11185.399999999998 11074.189999999999 10806.25 14175.0 11940.91 11575.2 11668.8 15674.3 15959.6 14511.399999999998 True False 12486.02922572638 11754.689083293788 12644.676663347036 13453.781735111 12089.876277508953 13204.489170465451 13678.264008184315 13322.888134201261 12124.096076713722 12354.31527557641 10907.818885734518 1.1446861518810036 1.0776388209623489 1.1592305295684748 1.2334071436321838 1.108367896841444 1.2105526603246566 1.2539870849957955 1.2214071643255118 1.1115050775705377 1.1326109651246274 1.0 13.41307503049448 -9.649813323587669 0.9919097033037177 1.019445572928666 1.1733283167065107 0.23719633108288218 0.06336590045497978 0.2513485542082664 0.5146445849321102 0.017723816952163626 0.011694270207057432 2.2396836335547967e-10 9.649813323587669 0.15388274377784472 DKS(ph)PSSLLEDAK ddPTM_A549_PD325901_60min_R1 2 DKSPSSLLEDAK 12 1 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 DKS(0.705)PS(0.29)S(0.004)LLEDAK;DKS(0.831)PS(0.162)S(0.007)LLEDAK 133.86 1.3380000000000001e-08 200377000.0 6590.5 6055.5 6070.799999999999 6137.8 7253.0 6098.799999999999 6414.9 6690.1 6889.0 6990.4 6658.8 True False 7259.562708330329 6565.818236779096 6482.8009946860075 6516.917966044816 6743.574301491635 6049.133394850693 6659.022529867972 6556.660707218081 6599.479287142819 6549.02495101087 5839.809813611023 1.2431162897480401 1.1243205594599919 1.110104815327435 1.115946952733912 1.1547592330445728 1.0358442462889448 1.14028071844867 1.1227524382619913 1.1300846256604473 1.1214449031793565 1.0 12.5117056699612 -14.999999999999861 0.20548918563773486 0.37284987760650684 1.1497360765974047 0.04991639277893134 0.05763709192011196 25.604055537647547 0.30532528876873566 6.461971460508751 0.03481619772501719 1.000000000000319e-15 14.999999999999861 0.776886198990898 DKS(ph)PVREPIDNLTPEER ddPTM_A549_MK2206_60min_R1 12 DKSPVREPIDNLTPEER 17 2 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(0.995)PVREPIDNLT(0.005)PEER;DKS(0.997)PVREPIDNLT(0.003)PEER 236.5 2.4765e-74 7096054600.0 80563.15000000001 80724.7 73191.83000000002 72984.70000000001 100823.90000000001 78810.6 74152.31000000001 81596.14999999998 109135.2 108873.99999999999 117093.2 True False 94160.2401400897 84833.24242692857 83571.53207129944 90865.95477640779 85992.83787061257 87150.28538175768 87624.82488395247 93162.65414022922 84416.25145310261 84279.28778372309 88015.72683208298 1.069811538564344 0.9638418664515949 0.9495068106491673 1.0323831665875178 0.9770167328694599 0.9901671953243494 0.9955587261254314 1.0584773595969454 0.9591041793491353 0.9575480521170008 1.0 16.42547371006613 DKS(ph)PVREPIDNLTPEER ddPTM_A549_PD325901_60min_R1 13 DKSPVREPIDNLTPEER 17 2 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(0.995)PVREPIDNLT(0.005)PEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(0.989)PVREPIDNLT(0.011)PEER 232.69 6.069799999999999e-65 10941464300.0 78701.48999999999 86354.69999999998 81524.66 85489.09999999996 97144.70000000001 78391.87 80457.33 82857.55999999998 93066.0 92396.10000000002 99406.39 True False 86691.2073278254 93632.1136308461 87057.41367520583 90769.56754716708 90321.59140302143 77753.47260146169 83519.17772109031 81204.90096530145 89154.75966573284 86562.19447758287 87180.03421902518 0.9943929031964854 1.074008681799908 0.9985934790583898 1.0411738004039297 1.036035282758706 0.8918724716959753 0.9580080860172917 0.9314621368613802 1.022651120344212 0.9929130592001135 1.0 16.411710149513535 -4.870234055799362 16.344754467723707 1.0019200891072275 0.00024284864887704142 0.0 0.049936492363499806 1202.7179122795828 161331.0071866236 0.006799897495873224 2923.320473942225 1.3482360773136386e-05 4.870234055799362 -1.0016772404583505 DKS(ph)TTPGGTGIKPFLER ddPTM_A549_MK2206_60min_R1 1 DKSTTPGGTGIKPFLER 17 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 DKS(0.332)T(0.332)T(0.332)PGGT(0.004)GIKPFLER 75.184 0.00010031 26208000.0 3674.6 3670.9 4029.6 3261.4 5458.1 4152.9 4349.0 3629.1 6343.2 5650.4 6004.6 True False 4294.782644655448 3857.7331303183746 4601.0578726410895 4060.4431464098097 4655.22072030135 4592.357121528089 5139.157005632181 4143.536038652626 4906.475328008937 4373.970715626771 4513.492101470673 0.9515431838810661 0.854711394988677 1.0194008916381805 0.8996234080229712 1.031401100443822 1.0174731711686653 1.13862102560402 0.9180332978321817 1.0870685530634283 0.969087929543858 1.0 12.140028367366543 -6.77703862267482 21.461123091762563 1.0376529107130235 0.9321392677219167 0.29127888431708626 0.06643793077143023 33.83400070524738 46548.52779506263 0.00884933891803319 0.016790862455038785 1.6709420074961101e-07 6.77703862267482 -0.10551364299110677 DKSDS(ph)DTEGLLFSR ddPTM_A549_MK2206_60min_R1 3 DKSDSDTEGLLFSR 14 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 DKS(0.112)DS(0.825)DT(0.064)EGLLFSR;DKS(0.04)DS(0.952)DT(0.009)EGLLFSR;DKS(0.011)DS(0.973)DT(0.014)EGLLFS(0.002)R 121.44 5.4004e-07 49206100.0 5896.6 6313.9 5583.1 4939.9 8756.6 6468.5 6323.0 6874.6 8823.7 8051.6 8649.0 True False 6891.801921971179 6635.250541152636 6374.867532445516 6150.175721760541 7468.515739797878 7152.992376557207 7471.8072537623 7849.09560257953 6825.146038553484 6232.737967920942 6501.214599743502 1.0600791307893584 1.0206170615279218 0.9805656211836216 0.946004108525073 1.1487877573050027 1.1002547703685124 1.1492940494622486 1.2073275665887429 1.049826295354527 0.9587036195000928 1.0 12.666493561776807 -4.8669258550704155 16.720690172856035 1.0480053925222197 3.0888655064724744 0.0 0.08230496241256292 1623.398791766242 208119.44368949768 0.01137720568224401 2573.319939583311 1.3585453644598656e-05 4.8669258550704155 2.040860113950255 DKSDS(ph)DTEGLLFSR ddPTM_A549_PD325901_60min_R1 2 DKSDSDTEGLLFSR 14 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 DKS(0.018)DS(0.976)DT(0.006)EGLLFSR;DKS(0.021)DS(0.757)DT(0.222)EGLLFSR 159.01 1.2285e-19 81330000.0 7731.4 7938.5 7528.299999999999 7928.4 9058.4 7046.5 8555.400000000001 7509.3 7555.299999999999 8098.700000000001 8669.1 True False 8516.286036444133 8607.505255168167 8039.215709345505 8418.119261297157 8422.169233783512 6989.115640259627 8880.98042869452 7359.521120568111 7237.777015263485 7587.346699867213 7602.855657952681 1.120143064604415 1.1321410851940363 1.0573942306712591 1.1072312352124822 1.1077639261734264 0.9192750664612349 1.1681111451070236 0.9679943236683654 0.9519813792193569 0.9979601140961757 1.0 12.892325686080998 -7.442670270542254 0.6675965003599151 0.9771870695537291 1.1166250607371142 0.3622717426822514 0.06410263695188029 0.516683809100728 0.45335696981465146 0.012723018864342501 0.031412647289633985 3.608525091436979e-08 7.442670270542254 0.13943799118338507 DKSDS(ph)PAIQLR ddPTM_A549_PD325901_60min_R1 1 DKSDSPAIQLR 11 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 DKS(0.391)DS(0.609)PAIQLR 100.18 7.5626e-05 34888000.0 7641.9 7274.6 7352.9 7908.6 9109.8 8489.5 8527.7 7855.9 8212.8 8710.3 9500.2 True False 8417.700062330552 7887.656072210922 7851.912010579619 8397.096260266228 8469.959075103887 8420.364326684758 8852.226290036493 7699.207911665667 7867.64457678133 8160.3301714908985 8331.735626729656 1.0103177104329988 0.9467002345712878 0.9424101246550983 1.007844780063218 1.0165899945181633 1.0106374834639213 1.0624708568088757 0.9240821188523156 0.9442983946274722 0.9794274010940939 1.0 13.024401346789418 -3.099993441653179 8.756766744836023 0.9804598030341785 1.0526534872507098 0.0 0.04049667780491992 0.0 0.0 0.0055775201552270845 0.0 0.0007943402300859657 3.099993441653179 0.07219368421653138 DKSKYDEIFYNLAPADGKLS(ph)GSK ddPTM_A549_MK2206_60min_R1 3 DKSKYDEIFYNLAPADGKLSGSK 23 3 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 DKSKYDEIFYNLAPADGKLS(0.877)GS(0.123)K;DKSKYDEIFYNLAPADGKLS(0.778)GS(0.222)K;DKSKYDEIFYNLAPADGKLS(0.904)GS(0.096)K 99.446 1.4206000000000002e-08 53277700.0 4553.3 4810.2 5049.0 4443.6 7257.0 5210.8 5900.9 5184.6 8036.299999999999 6783.8 7949.5 True False 5321.785722503033 5055.018633974626 5765.02412124401 5532.282199480786 6189.5049132897675 5762.203397350899 6973.017147513203 5919.532927171589 6216.090881334066 5251.334868446284 5975.419754961379 0.8906128675034695 0.8459687923643279 0.9647898152188089 0.9258399286321841 1.035827635062898 0.9643177607006692 1.1669501781399576 0.9906472130692765 1.0402768568974352 0.878822757863347 1.0 12.544824346229223 -6.304296130100625 1.1363508819256134 1.0262541846762476 0.867618472443847 0.3314736361172299 0.07028859497349373 0.3117064136867067 0.7059181237949954 0.007836908499459904 0.037242171881944855 4.962538280650627e-07 6.304296130100625 -0.15863571223240058 DKSKYDEIFYNLAPADGKLS(ph)GSK ddPTM_A549_PD325901_60min_R1 2 DKSKYDEIFYNLAPADGKLSGSK 23 3 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 DKSKYDEIFYNLAPADGKLS(0.942)GS(0.058)K;DKSKYDEIFYNLAPADGKLS(0.949)GS(0.051)K 138.34 2.1376999999999998e-23 109200000.0 7852.5 7389.4 8068.0 8951.8 8698.900000000001 10257.0 8147.5 9281.0 10015.599999999999 9371.0 10275.8 True False 8649.68001929503 8012.130671101552 8615.542996825254 9504.732354987127 8087.919273575842 10173.470392697513 8457.55757098307 9095.883174196351 9594.679162187202 8779.313460735135 9011.941743663148 0.9598020343814532 0.8890570865857378 0.9560140580006937 1.054681957045549 0.8974668837892741 1.1288877227653082 0.9384833825551635 1.0093144666178326 1.0646628035443984 0.9741866637019054 1.0 13.137622272181286 -6.245213835537465 0.8811394697831177 1.026236922365723 0.914229066363322 0.16063362281763127 0.06372382417004134 0.791214714915207 0.9468021332751553 0.009342094270822287 0.06135835458544686 5.685729110974955e-07 6.245213835537465 -0.11200785600240104 DKST(ph)TPGGTGIKPFLER ddPTM_A549_MK2206_60min_R1 1 DKSTTPGGTGIKPFLER 17 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 DKS(0.12)T(0.44)T(0.44)PGGT(0.001)GIKPFLER 91.166 1.9168e-06 23974000.0 4092.4 4613.9 4337.9 4198.6 6789.8 5624.0 5402.5 4051.7 7046.5 7182.3 7166.9 True False 4783.0970704261545 4848.72780243972 4953.079448513443 5227.257188482317 5791.029414393671 6219.127947090935 6384.064318907299 4626.04088281085 5450.479000948257 5559.813441676014 5387.160933622581 0.8878697201291469 0.9000525252879733 0.919422959429348 0.9703176223783727 1.0749687053621229 1.1544351512270303 1.1850517178840532 0.8587159247347902 1.0117535132337503 1.032048886265095 1.0 12.395309448905586 -6.3770725517118585 2.884081291035187 1.023545467426889 0.8997475826101281 0.3497624749329219 0.08236887928449346 0.2761696873636143 4.395812801296671 0.012340026613676293 0.03221392179490092 4.1968886638537716e-07 6.3770725517118585 -0.1237978848167608 DKST(ph)TPGGTGIKPFLER ddPTM_A549_PD325901_60min_R1 1 DKSTTPGGTGIKPFLER 17 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 DKS(0.099)T(0.53)T(0.371)PGGTGIKPFLER 107.47 3.2159e-09 36549000.0 5639.0 5930.9 5576.8 5491.8 6875.8 6397.9 6851.8 6323.2 6842.0 6220.3 5895.6 True False 6211.467128787607 6430.7177574953585 5955.275184022687 5831.016013217264 6392.867528222279 6345.797623616987 7112.548998448829 6197.078815545565 6554.454533695918 5827.549196436963 5170.478575287609 1.2013331142063757 1.243737434331724 1.1517841331914667 1.1277517019578625 1.2364169844503563 1.227313396857853 1.3756074790529795 1.1985503324904216 1.2676688314739464 1.127081199850597 1.0 12.336082106061086 -10.763931882048356 0.9449045845296584 0.9959907326209292 1.2269084146200828 0.40030904037248294 0.07086000267908428 0.3014913206419136 0.4645136009059586 0.04832450063559126 0.01145204115948441 1.7221386667417736e-11 10.763931882048356 0.23091768199915363 DKSTT(ph)PGGTGIKPFLER ddPTM_A549_MK2206_60min_R1 1 DKSTTPGGTGIKPFLER 17 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 DKS(0.163)T(0.163)T(0.673)PGGTGIKPFLER 48.315 0.042413 3882100.0 2512.8 2752.9 2696.2 1904.6 3333.0 2778.1 2520.9 2501.9 3714.3 3747.7 4225.4 True False 2936.899207938334 2893.0108514134017 3078.5617024555536 2371.2270855007414 2842.720115198402 3072.076698046467 2978.914898941861 2856.5519867474054 2873.016980518288 2901.0919671093093 3176.1165648926108 0.9246824377925924 0.9108641928924982 0.9692848607902539 0.7465806235549532 0.8950301593526427 0.9672430577655258 0.937911074130424 0.8993851228013697 0.9045691245325655 0.9134085314048918 1.0 11.633048145665175 -11.084275138961727 0.43935545827158373 1.0394604864315853 0.9009616652416901 0.010945943691462401 0.06192934147384808 2.652250206801441 0.5352236922561439 0.17101429807610513 0.01511001309637896 8.236161634282138e-12 11.084275138961727 -0.1384988211898952 DKSTT(ph)PGGTGIKPFLER ddPTM_A549_PD325901_60min_R1 1 DKSTTPGGTGIKPFLER 17 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 DKS(0.035)T(0.136)T(0.829)PGGTGIKPFLER 116.35 4.942e-10 38475000.0 7358.1 6997.1 7530.1 7282.9 8133.3 8045.2 7862.8 8196.5 8156.0 8046.9 7688.4 True False 8105.08889525307 7586.7701733245885 8041.137868169784 7732.748192334025 7562.045066361773 7979.68255857756 8162.023156689253 8033.014377470142 7813.231683254005 7538.817360707452 6742.775540783167 1.2020404425788838 1.125170210314222 1.192556065307761 1.1468197547972765 1.121503306853879 1.1834418201099908 1.2104841852323087 1.1913512957509949 1.1587560101913914 1.1180584783090415 1.0 12.719126857474327 -10.445545725448074 0.7260117371020894 0.9960575702079506 1.1703467051968892 0.4062252251357853 0.04410783706405859 0.22920120736654911 0.2126145108822904 0.02244774882417754 0.006095183343089855 3.584712040269039e-11 10.445545725448074 0.1742891349889386 DKT(ph)LLRDEK ddPTM_A549_MK2206_60min_R1 1 DKTLLRDEK 9 2 Q9Y490 Q9Y490 TLN1 Talin-1 1 DKT(1)LLRDEK 53.967 0.0071681 2269500.0 867.18 661.28 763.64 707.84 818.21 617.97 701.47 728.57 1208.4 996.62 1115.3 True False 1013.5387834845446 694.9363274447508 871.9356347686221 881.2608317761452 697.8523928762329 683.3631752247135 828.9180190252483 831.8470286520472 934.6993294182748 771.4828498173491 838.3402292859212 1.2089826398380685 0.8289430748619584 1.0400737126874093 1.0511971166250518 0.8324214543189076 0.8151382354712793 0.9887608754399172 0.9922546951618859 1.1149403270488762 0.920250302761303 1.0 9.71139205122702 -8.548148919570204 5.1434273577138 1.054498615145165 0.9582278290260053 0.0 0.11943405784098153 0.28551307943027704 20.444727314567075 0.018868731246032635 0.021717655324097248 2.830421277972905e-09 8.548148919570204 -0.09627078611915962 DKT(ph)PLHQK ddPTM_A549_MK2206_60min_R1 2 DKTPLHQK 8 1 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 DKT(1)PLHQK;DKT(1)PLHQK 60.434 0.004477 16240100.0 2764.44 3141.94 3714.62 3183.53 3037.2 3041.59 2828.1 2527.06 3605.8 4683.0 4651.299999999999 True False 3231.0098879310117 3301.8513256892093 4241.408972322322 3963.4949929140917 2590.43190335451 3363.449034955962 3341.929162480653 2885.278493796675 2789.09205727939 3625.107047515247 3496.25384065059 0.9241348126284157 0.9443969105729446 1.2131295854459676 1.133640511690237 0.7409164269584262 0.9620151133906468 0.9558599903772376 0.8252485732728652 0.797737288079858 1.0368546486432118 1.0 11.771594218171424 -6.743180576955393 24.99188204779467 0.8952791203306159 1.0573879916194497 0.29499557409584676 0.11199583447019001 238.64048950093962 326639.3541307667 0.016643376579931018 0.03459445346889816 1.8064228703981806e-07 6.743180576955393 0.1621088712888339 DKT(ph)PLHQK ddPTM_A549_PD325901_60min_R1 4 DKTPLHQK 8 1 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 DKT(1)PLHQK;DKT(1)PLHQK;DKT(1)PLHQK;DKT(1)PLHQK 81.865 0.0020489 23910100.0 6270.2 6022.1 5474.6 5395.6 6456.3 5553.3 5532.5 5332.3 5972.5 6548.1 6587.3 True False 6906.746088122729 6529.603501561788 5846.139277444163 5728.8739577033175 6002.831761025844 5508.07576599075 5743.042315000166 5225.943093391571 5721.49659492822 6134.651848494265 5777.103860335179 1.195537808406652 1.1302555154656593 1.0119498313996 0.9916515430918593 1.039072847943843 0.9534320135402897 0.9941040448365703 0.9045956624169761 0.9903745428935853 1.061890524526305 1.0 12.496130716235331 -5.647238697181999 2.0048909150193297 0.9883113761145939 1.2018251756923966 0.7473285570341932 0.03875897355004495 0.11446156479263005 0.7902393852801063 0.004443223363913865 0.03360368700248282 2.25300057632599e-06 5.647238697181999 0.2135137995778027 DKTESVTSGPMSPEGS(ph)PSKSPSK ddPTM_A549_MK2206_60min_R1 1 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMS(0.004)PEGS(0.36)PS(0.254)KS(0.36)PS(0.022)K 120.93 4.0472999999999997e-16 12890000.0 1548.3 1984.7 1871.3 1844.1 2368.2 1704.4 1705.0 2030.7 2766.3 2406.1 2494.2 True False 1809.6151876993495 2085.712752660895 2136.6784785272157 2295.9045827847945 2019.840917135569 1884.7584767108451 2014.7764301225254 2318.5579437579277 2139.737466873365 1862.5603388909751 1874.821303581946 0.965220090171785 1.112486159974836 1.1396704712310328 1.2245991542758483 1.077351165829274 1.0053003308154829 1.0746498486406078 1.2366820983568936 1.1413020871830732 0.9934601955570135 1.0 10.872537378018912 -10.799121521733143 1.1087865176599518 1.0015581271775453 1.1131059916101411 0.23276991214378606 0.0773422257902066 0.6099203434036393 1.360179395211242 0.05074216166578233 0.013439605075990745 1.5881023129520193e-11 10.799121521733143 0.11154786443259579 DKTESVTSGPMSPEGS(ph)PSKSPSKK ddPTM_A549_MK2206_60min_R1 2 DKTESVTSGPMSPEGSPSKSPSKK 24 3 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMS(0.001)PEGS(0.324)PS(0.324)KS(0.324)PS(0.026)KK;DKTESVTSGPMSPEGS(0.328)PS(0.328)KS(0.328)PS(0.015)KK 63.901 6.938800000000001e-05 15720300.0 1122.29 1140.43 1214.58 999.8199999999999 1206.85 1366.6 1052.33 1113.1999999999998 1617.4099999999999 1800.24 1556.59 True False 1311.705114643869 1198.4730158296293 1386.825707502584 1244.7759448836257 1029.3239637045278 1511.2127049243381 1243.5247394198461 1270.9995090320208 1251.0692174730318 1393.5645336790194 1170.0457433015074 1.1210716522438195 1.02429586423511 1.1852747770265721 1.0638694700698221 0.8797296768928826 1.291584293670573 1.0628001054992975 1.0862818965057324 1.0692481252424382 1.1910342323427554 1.0 10.19234921818376 -10.098734736217418 0.6825180688668876 1.0013076232862552 1.08829082144151 0.0 0.11092804148255361 1.232666892272104 1.1181182792053816 0.05352492196833762 0.0196856636731727 7.966457870635974e-11 10.098734736217418 0.08698319815525468 DKTESVTSGPMSPEGS(ph)PSKSPSKK ddPTM_A549_PD325901_60min_R1 1 DKTESVTSGPMSPEGSPSKSPSKK 24 3 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMS(0.001)PEGS(0.392)PS(0.301)KS(0.301)PS(0.004)KK 88.014 6.9376e-08 11471000.0 906.75 908.74 1131.7 991.41 1242.0 918.66 1157.0 1016.2 1047.2 1184.2 949.21 True False 998.8025924859304 985.3227090233079 1208.5039674649402 1052.6471440445252 1154.7662046673952 911.1787375407521 1201.0302681346927 995.9310938065215 1003.1898257360962 1109.4294099031633 832.4631875379528 1.1998159287258503 1.1836231604876655 1.4517206112610757 1.2644969288765506 1.387167891570879 1.0945573944664198 1.4427427976566671 1.1963665285332705 1.2050861116190317 1.3327068710201475 1.0 9.701242665765598 -9.986168537856045 0.5154476615172637 0.9873099909375664 1.2910457258216794 0.0 0.14366693743530604 0.5899796330317311 0.30358395212931133 0.08039418582785542 0.0268514541773376 1.0323606969545874e-10 9.986168537856045 0.303735734884113 DKTESVTSGPMSPEGSPS(ph)KSPSKK ddPTM_A549_PD325901_60min_R1 1 DKTESVTSGPMSPEGSPSKSPSKK 24 3 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMS(0.005)PEGS(0.103)PS(0.433)KS(0.433)PS(0.025)KK 75.17399999999999 6.506799999999999e-06 8525800.0 901.65 892.44 846.97 803.85 992.65 753.92 1219.4 1161.7 678.28 886.52 820.23 True False 993.1848442403519 967.6490508184525 904.4504774443576 853.5019888241916 922.9296884565931 747.7803254813797 1265.8049342812837 1138.5289821639794 649.7742503822373 830.5449759055507 719.3469098663672 1.380675763832579 1.3451771843966247 1.2573216969992642 1.1864956631046712 1.2830105694456175 1.0395267084977045 1.759658541546292 1.5827258955981105 0.9032835777426854 1.154581975002632 1.0 9.490543877606589 -8.77937165444659 24.99961697328449 0.9543283084058898 1.3458322243386487 0.3642377229672513 0.19173144305613915 151.0580456744075 210591.13974374856 0.032809780509948296 0.03496334623764275 1.6619897673134997e-09 8.77937165444659 0.3915039159327589 DKTESVTSGPMSPEGSPSKS(ph)PSK ddPTM_A549_MK2206_60min_R1 3 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMS(0.024)PEGS(0.117)PS(0.353)KS(0.466)PS(0.039)K;DKTESVTSGPMSPEGS(0.061)PS(0.044)KS(0.718)PS(0.177)K;DKTESVTSGPMS(0.009)PEGS(0.005)PS(0.121)KS(0.713)PS(0.153)K 111.64 3.0057e-11 48962000.0 6107.1 7066.799999999999 6308.26 6232.02 8723.6 6956.1 6428.0 6182.62 10224.0 9246.2 9256.1 True False 7137.829175740292 7426.469935256726 7202.866124594716 7758.865179766012 7440.369996083043 7692.189884914522 7595.884394620291 7059.025318479659 7908.280324373096 7157.476998235206 6957.554914635892 1.025910576821345 1.0673965245512365 1.035258249912306 1.115171245496674 1.0693943615783044 1.1055880951414776 1.0917462366903652 1.0145842045213778 1.1366464830535885 1.028734531894065 1.0 12.76436467517696 -4.743641366070514 1.2819381294354208 1.069352386934596 0.9357496609440705 0.07078157912429128 0.04159145819434101 12.163301029375845 6.7687275982382005 0.007500087046665271 2.9578500537933747 1.804507261044078e-05 4.743641366070514 -0.13360272599052547 DKTESVTSGPMSPEGSPSKS(ph)PSK ddPTM_A549_PD325901_60min_R1 4 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMSPEGS(0.065)PS(0.044)KS(0.873)PS(0.018)K;DKTESVTSGPMSPEGS(0.031)PS(0.011)KS(0.935)PS(0.023)K;DKTESVTSGPMS(0.008)PEGS(0.143)PS(0.107)KS(0.727)PS(0.016)K;DKTESVTSGPMSPEGS(0.001)PS(0.024)KS(0.952)PS(0.024)K 149.52 6.033199999999999e-28 92775700.0 10362.5 10462.6 9943.2 10569.800000000001 11817.2 10106.099999999999 10410.5 10524.300000000001 11236.2 12338.800000000001 12609.2 True False 11414.493371530696 11344.3200204979 10618.005345318888 11222.672540242509 10987.200639126837 10023.799272266771 10806.677274344185 10314.38458034637 10763.981588938042 11559.726062247213 11058.34833630446 1.0322059881272698 1.0258602528602394 0.9601800397677898 1.014859742064606 0.9935661551785229 0.9064463306295685 0.9772415324326472 0.9327237908109963 0.9733805864660626 1.0453392957695802 1.0 13.432848301743794 -5.721843893028193 10.186281228446722 0.9783495360752984 1.029216546170413 0.23013612215431933 0.035864263106855546 0.43540477043046155 107.37134090237463 0.004223422073486829 0.01628684660868331 1.897387813915341e-06 5.721843893028193 0.05086701009511463 DKVEENSVRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 DKVEENSVRSPR 12 2 Q92576-2;Q92576;D6R9X2;E9PE34;A0A1B0GX99;D6RBF0 Q92576-2 PHF3 PHD finger protein 3 1 DKVEENS(0.008)VRS(0.992)PR;DKVEENS(0.005)VRS(0.995)PR 65.51100000000001 0.0012009 141334000.0 4606.0 5765.9 4731.0 4103.8 6986.2 5339.700000000001 4693.5 5118.8 7369.8 7056.0 7549.3 True False 5383.380194111734 6059.3596818498845 5401.926939513846 5109.23118422658 5958.539234563182 5904.743509794008 5546.2481963519485 5844.40557566754 5700.552067152273 5462.0446993951755 5674.600459919489 0.9486800404954172 1.0678037554622575 0.9519484195704041 0.9003684436135737 1.0500367870212524 1.0405566967225361 0.9773812686066427 1.029923713034496 1.004573292413463 0.9625426033029769 1.0 12.470303102654265 -6.810788622900657 24.99991735857339 1.008151431042237 0.9732948228257825 0.16704901505864056 0.044411853204131664 167.91005553049172 85061.2037286776 0.00594265787870981 0.011230583926485184 1.546006719191245e-07 6.810788622900657 -0.03485660821645453 DKVEENSVRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 DKVEENSVRSPR 12 2 Q92576-2;Q92576;D6R9X2;E9PE34;A0A1B0GX99;D6RBF0 Q92576-2 PHF3 PHD finger protein 3 1 DKVEENS(0.021)VRS(0.979)PR 48.659 0.006746600000000001 122600000.0 5735.7 6280.8 5747.5 6114.3 7694.8 6890.9 6511.9 7652.2 8543.2 7490.3 7150.9 True False 6317.9840416008265 6810.105058469514 6137.559912525173 6491.9664244171845 7154.343793618895 6834.782795070609 6759.713917948412 7499.570867965226 8184.159013778279 7017.361179697403 6271.384633289943 1.0074304816297701 1.0859013529994508 0.9786610567538151 1.0351727415914411 1.1407917408927533 1.089836327178853 1.0778662629088807 1.1958397238395793 1.3050003296456882 1.118949257624488 1.0 12.61456828957828 -6.967493317885103 1.201502176746761 1.1464768490492867 1.024532167519015 0.2879363748489474 0.07681056864228293 0.6509380150756381 1.853690935102861 0.018407238446828404 0.04622539404690484 1.0777218355438061e-07 6.967493317885103 -0.1219446815302716 DKYKT(ph)LR ddPTM_A549_MK2206_60min_R1 2 DKYKTLR 7 2 E7EQR4;P15311;P35241-3;A0A2R8Y4H6;P26038;A0A2R8Y5S7;P35241;P35241-5;P35241-4;P35241-2 E7EQR4;P26038;A0A2R8Y5S7 EZR;RDX;MSN Ezrin;Radixin;Moesin 1 DKY(0.003)KT(0.997)LR;DKY(0.001)KT(0.999)LR 57.174 0.012372 6522600000.0 25452.0 28682.0 30241.0 29104.0 38657.0 28981.0 26544.0 26733.0 41091.0 38446.0 36742.0 True False 29747.675358343884 30141.791289272835 34529.62853050903 36234.481306528185 32970.60650861826 32047.750183969147 31366.70120889873 30522.484616378933 31783.954108843387 29761.02189809338 27617.947372387076 1.0771139128205505 1.0913841960394617 1.2502604941970588 1.3119903813980063 1.1938108963732355 1.1603958017535752 1.1357361496118905 1.105168469069351 1.1508441840475647 1.0775971688558212 1.0 14.75331847880794 -10.629690529565895 0.39393804581221165 0.9519827803474936 1.1820865891673848 0.3298082494242677 0.06813321776196139 1.5881264813760791 0.328271003968566 0.15142347354875266 0.022934230927370694 2.3458998659066207e-11 10.629690529565895 0.23010380881989123 DKYKT(ph)LR ddPTM_A549_PD325901_60min_R1 4 DKYKTLR 7 2 E7EQR4;P15311;P35241-3;A0A2R8Y4H6;P26038;A0A2R8Y5S7;P35241;P35241-5;P35241-4;P35241-2 E7EQR4;P26038;A0A2R8Y5S7 EZR;RDX;MSN Ezrin;Radixin;Moesin 1 DKY(0.002)KT(0.998)LR;DKYKT(1)LR;DKYKT(1)LR;DKYKT(1)LR 67.334 0.008152 9149100000.0 33945.9 34905.7 39208.7 39102.7 41805.1 44649.6 43738.2 47891.3 50297.4 51777.1 48403.5 True False 37392.062778349224 37847.32584056481 41869.638163066695 41517.98497032497 38868.853995765596 44285.98846112769 45402.681135461404 46936.07045150198 48183.57519192009 48507.88506966485 42450.17635506717 0.8808458760121459 0.8915705207911833 0.9863242454602623 0.9780403412945793 0.9156346883144555 1.0432462774878764 1.0695522382686593 1.1056743335743373 1.1350618378801751 1.1427016148043538 1.0 15.373482926874344 -7.357073409350023 3.986122572579587 1.069175164275971 0.933930501583525 0.7086080304272782 0.048340186907882395 0.13831465142638702 3.9808740077473663 0.008867708765142052 0.014511679785511091 4.394673254369735e-08 7.357073409350023 -0.13524466269244606 DLAALGDKVNS(ph)LGETAER ddPTM_A549_MK2206_60min_R1 1 DLAALGDKVNSLGETAER 18 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 DLAALGDKVNS(0.979)LGET(0.021)AER 61.963 0.00082874 1556700.0 664.71 692.46 876.34 885.38 956.69 892.86 511.5 839.71 1088.0 1014.2 893.4 True False 776.8967974007843 727.7032562642029 1000.6181894258215 1102.2981397462179 815.9621683195793 987.3418525674996 604.4329290367579 958.7414640040226 841.5697371789829 785.0915156075092 671.5441234143652 1.1568812387945102 1.0836268696155138 1.4900259782459693 1.6414381442901302 1.2150536947162045 1.4702561129527993 0.900064356104569 1.427667119070964 1.2531860645286388 1.169084038165399 1.0 9.391338383976638 -10.500786136337148 0.4302670557350591 0.9347169053539368 1.318258029543195 0.11580797380074603 0.2043872578256705 1.9845314778489078 0.5324979654368928 0.33067382764570447 0.05864864511398454 3.156558654187627e-11 10.500786136337148 0.3835411241892581 DLAALGDKVNS(ph)LGETAER ddPTM_A549_PD325901_60min_R1 3 DLAALGDKVNSLGETAER 18 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 DLAALGDKVNS(0.961)LGET(0.039)AER;DLAALGDKVNS(0.945)LGET(0.055)AER;DLAALGDKVNS(0.978)LGET(0.022)AER 66.87100000000001 0.00054084 4217400.0 2406.2 2659.3999999999996 2507.1000000000004 2951.6 2974.0 3121.2 2449.8 2733.5 3189.8 3215.6 3027.4 True False 2650.475652649181 2883.516971165111 2677.2468824170273 3133.9136284300366 2765.1164997430214 3095.7819820305613 2543.0284795819975 2678.9781981107335 3055.7437988283014 3012.566467222272 2655.0489922697802 0.9982774933216244 1.0860503815788407 1.0083606329720758 1.1803599999677892 1.041455923334637 1.165998062952504 0.9578084950545424 1.0090127172457546 1.1509180462300888 1.1346556978772933 1.0 11.374522767255558 -11.219511894986569 1.681929860890668 0.9999970365582986 1.0795296540271988 0.0 0.08138313265102244 0.6067651190720315 3.0933435977172086 0.05230912898312397 0.010831206659369428 6.0323718550511064e-12 11.219511894986569 0.07953261746890017 DLADELALVDVIEDK ddPTM_A549_PD325901_60min_R1 1 DLADELALVDVIEDK 15 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;P00338-4;F5GXH2;F5GZQ4;F5H5J4;F5H6W8 P00338 LDHA L-lactate dehydrogenase A chain 0 113.77 3.2348000000000004e-06 11109000.0 1120.4 1166.7 1339.3 790.23 1361.0 1301.2 1001.7 1191.8 1056.4 1202.7 1245.3 False True 1234.1421832051133 1265.0219035340065 1430.1929518651525 839.040712357456 1265.4080551951074 1290.6034586114854 1039.820241651272 1168.0286140509875 1012.0031817299571 1126.7613167459344 1092.1359946071072 1.1300261041658024 1.1583007150946385 1.3095374192658673 0.7682566241755436 1.1586542897987115 1.1817241304969317 0.9520977669318044 1.069490081655245 0.9266274408381002 1.0317042221021966 1.0 10.092936798913676 -6.657065128375699 0.42965053362309447 0.9660844347902994 1.206410285958304 0.13973415746997542 0.1312756105771224 2.1364907181599198 0.5453343865749604 0.03398874130854814 0.2174742725236795 2.2025961289806767e-07 6.657065128375699 0.24032585116800453 DLAFEVPERGS(ph)RPAS(ph)PAAK ddPTM_A549_MK2206_60min_R1 1 DLAFEVPERGSRPASPAAK 19 2 A0A590UJ53;Q9P2N6-8;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6 A0A590UJ53 KANSL3 KAT8 regulatory NSL complex subunit 3 2 DLAFEVPERGS(1)RPAS(1)PAAK 42.325 0.023604 2721400.0 695.22 585.05 561.7 354.01 502.85 641.69 582.66 440.82 641.4 518.23 791.82 True False 812.5561395029007 614.8265460494067 641.3575062195996 440.74246589211265 428.881431121367 709.5932098806516 688.5217799267981 503.3075849546312 496.12392410533056 401.16148307363386 595.1892408797434 1.365206364116847 1.0329933806273743 1.0775690522759036 0.7405081201411765 0.7205799461150231 1.1922144439839149 1.1568115359563638 0.8456261477621759 0.8335566069238999 0.6740066108733435 1.0 9.217204637138456 -5.114242764758402 1.4695302446362637 0.9293692505044225 1.654102090215626 0.3840598680029006 0.16621465761224138 1.290713128659081 1.917103165094006 0.022026605558685866 1.5031231178953302 7.687006268842748e-06 5.114242764758402 0.7247328397112035 DLAFEVPERGS(ph)RPAS(ph)PAAK ddPTM_A549_PD325901_60min_R1 1 DLAFEVPERGSRPASPAAK 19 2 A0A590UJ53;Q9P2N6-8;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6 A0A590UJ53 KANSL3 KAT8 regulatory NSL complex subunit 3 2 DLAFEVPERGS(1)RPAS(1)PAAK 41.202 0.028185 3673900.0 337.64 479.39 544.12 579.16 612.23 526.8 608.24 532.11 638.99 506.47 666.91 True False 371.91696424256895 519.7898777193516 581.0472552593646 614.9333978322063 569.2290768788395 522.5099154599835 631.3869060416987 521.4966486177801 612.1354724475822 474.49139776528915 584.8842978908101 0.6358812599068966 0.8887054749012757 0.9934396552527013 1.0513761440506408 0.9732336445542717 0.8933560318583368 1.0795073629409864 0.8916236091452338 1.0465924194837242 0.8112568579399104 1.0 9.192007448028985 -5.277708705958125 1.9307764370881635 1.0067561065415427 0.5295157839248831 0.5521678963657872 0.08232885539190503 0.24464887717127223 0.9666779556445809 0.007769631117343336 0.20513560586546448 5.275836085694963e-06 5.277708705958125 -0.4772403226166596 DLAPIGIR ddPTM_A549_MK2206_60min_R1 1 DLAPIGIR 8 0 Q99714 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 0 60.799 0.03084 1004100.0 496.94 583.43 615.8 770.29 734.92 584.88 533.15 531.6 908.94 890.55 919.75 False True 580.8113229834748 613.1240949689858 703.1296997152035 959.0110845796319 626.8142415426369 646.7716133880775 630.0164537946185 606.9559279567214 703.0665412789199 689.3741364861635 691.3506911913621 0.8401110035524785 0.8868496159487839 1.0170376751971468 1.3871557471462523 0.9066516451476839 0.9355188642012288 0.9112834655722264 0.8779277083108019 1.0169463200613404 0.9971410244751581 1.0 9.43327390053372 DLAPIGIR ddPTM_A549_PD325901_60min_R1 1 DLAPIGIR 8 0 Q99714 Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 0 76.035 0.013097 1338800.0 896.96 760.13 793.14 916.89 983.85 621.41 691.28 609.93 916.82 712.98 746.85 False True 988.0187188929476 824.1888227764665 846.9672499382722 973.5242128917257 914.7477700982415 616.349442987829 717.5870386829308 597.7644676691716 878.2892437274319 667.9623211220721 654.9921846722216 1.508443523471021 1.258318560226663 1.2930951998490194 1.4863142426331506 1.3965781447545205 0.9410027438667369 1.0955658028836384 0.9126283971896726 1.3409156082785247 1.0198019713110642 1.0 9.355333882376117 -7.23328849878673 24.322200141498637 1.124838871955154 1.381443220042863 0.5768431197889183 0.13595243971253126 437.0096702092872 377573.7252962529 0.023776367542051653 0.04117520496560514 5.8440174118283494e-08 7.23328849878673 0.25660434808770893 DLAQRS(ph)EER ddPTM_A549_MK2206_60min_R1 2 DLAQRSEER 9 1 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 DLAQRS(1)EER;DLAQRS(1)EER 81.431 0.00044435 20280000.0 1982.62 1880.5 1964.74 1788.59 1986.65 1488.25 1816.38 1544.03 2288.3999999999996 2849.1 3191.8 True False 2317.237785594834 1976.2094177350796 2243.369675573967 2226.794630292856 1694.4164166993417 1645.735627179604 2146.392734396452 1762.9009808935596 1770.0810538238827 2205.4863312141138 2399.1879708014 0.9658425324718546 0.8236992856691288 0.9350537360457901 0.9281451296827903 0.7062457953777405 0.6859552678691865 0.894633001048056 0.734790688494782 0.7377833981189157 0.9192636667302962 1.0 11.228330478524946 -2.0000553727477586 0.9317273899827803 0.8455060652641878 69.03749062780808 0.1050620485096625 0.10290235695077869 2748.552954548476 4.953639666164604 0.019247187092389952 399258.77773077256 0.009998725076642916 2.0000553727477586 68.1919845625439 DLAQRS(ph)EER ddPTM_A549_PD325901_60min_R1 2 DLAQRSEER 9 1 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 DLAQRS(1)EER;DLAQRS(1)EER 83.314 0.00040239 23376200.0 2937.5 2704.2 2707.4 2706.0 3415.3 2915.8 2122.2 2684.4 2871.3 2666.5 3101.0 True False 3235.712837526795 2932.092424390725 2891.1404449187744 2873.143474228105 3175.421110145372 2892.0546915304094 2202.9614823123993 2630.8575361289386 2750.629246214717 2498.1367349322645 2719.5966588586184 1.18977673655651 1.0781350296338752 1.0630769219036145 1.056459407268844 1.1676073728808218 1.0634130918311135 0.8100324271015082 0.9673704839867973 1.0114107315344043 0.918568835123037 1.0 11.409176987088896 -7.533692878081463 24.997480301071125 0.9864873466009496 1.104692931617863 0.5428051442202041 0.06933427084363304 162.4756555289822 375570.61567335733 0.010325504301295625 0.015322761641323377 2.926220994754603e-08 7.533692878081463 0.11820558501691347 DLAVPAALT(ph)PR ddPTM_A549_MK2206_60min_R1 2 DLAVPAALTPR 11 0 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 1 DLAVPAALT(1)PR;DLAVPAALT(1)PR 136.38 4.1018e-08 203818000.0 4141.6 4157.1 3936.7 3308.4 5129.7 4076.5 3663.8 3599.3999999999996 5426.4 5119.3 5469.1 True False 4840.600827601643 4368.6786335902725 4494.983255714255 4118.958148519718 4375.127925272499 4507.872524238301 4329.46503500464 4109.625972700195 4197.329064180177 3962.8465744917376 4110.971530518811 1.17748342251126 1.0626876399309286 1.0934114289881696 1.001942756825635 1.0642564398202852 1.0965467629179617 1.0531488731711687 0.999672691039423 1.0210065997831095 0.9639683819439198 1.0 12.005263665583264 -2.0000000000000004 0.2491568166178732 1.004268743385505 1.8573143421201863 0.6111293431628904 0.0357925901586845 22.69664105944537 0.27534180892774474 0.015604849882611673 8.235869228531335 0.00999999999999999 2.0000000000000004 0.8530455987346812 DLAVPAALT(ph)PR ddPTM_A549_PD325901_60min_R1 2 DLAVPAALTPR 11 0 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 1 DLAVPAALT(1)PR;DLAVPAALT(1)PR 138.75 1.7705e-08 383440000.0 3689.8999999999996 3431.8999999999996 3621.4 3549.8 4183.6 3696.8 3818.0 3752.7 3448.8 4126.9 4621.799999999999 True False 4064.4959316391864 3721.118257254099 3867.1699812472666 3769.0630838192665 3889.7583686364846 3666.694486470132 3963.2960792897657 3677.8494545638023 3303.8589295250636 3866.3268296988404 4053.3479000041184 1.0027503268680826 0.9180357445385623 0.9540681127428853 0.9298641954260667 0.9596408856571459 0.9046088756571836 0.9777833477569835 0.907360913816469 0.8150938461319115 0.9538600991281583 1.0 11.984898292287244 -8.301000796805678 23.543431325785015 0.9098442905884943 0.9464027896684122 0.06915282440503268 0.04886716022538113 645.4912240377694 384137.34764338576 0.011305372321729358 0.013667723169826044 5.000336175580207e-09 8.301000796805678 0.03655849907991793 DLDEEGS(ph)EK ddPTM_A549_MK2206_60min_R1 2 DLDEEGSEK 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EK;DLDEEGS(1)EK 128.01 5.1526999999999996e-05 73987000.0 4119.2 3658.6 2624.43 3202.6000000000004 8405.4 4883.5 3507.3 5584.6 7172.2 4408.4 4279.0 True False 4814.420255229062 3844.8071128559236 2996.613637258154 3987.237143770176 7168.976794566054 5400.268728595056 4144.531010773449 6376.234152120215 5547.708151649907 3412.5393782332317 3216.4062056078687 1.4968321621923946 1.1953736148600962 0.9316651709082945 1.2396559665935067 2.2288779265712146 1.6789759698820315 1.2885595742065714 1.9824094795623521 1.7248157717073693 1.0609789809146 1.0 11.651233903184234 -4.170410358961261 12.416167643222623 1.422338561280271 1.358475810874074 0.0 0.40221924341889015 0.0 0.0 0.057041959699295916 0.0 6.75444455476931e-05 4.170410358961261 -0.06386275040619704 DLDEEGS(ph)EK ddPTM_A549_PD325901_60min_R1 2 DLDEEGSEK 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EK;DLDEEGS(1)EK 115.57 0.00020308 62496000.0 3785.9 3316.2 3948.5 3876.1 4094.6000000000004 2389.1 2789.2 2735.2 3369.8999999999996 3757.2 3134.2 True False 4170.2417809677245 3595.667812204914 4216.468954259358 4115.5178937382 3807.0094216031507 2369.6439617035794 2895.344532308806 2680.6442902771078 3228.2748221429224 3519.9697507922347 2748.713269330761 1.5171614396808542 1.3081276436957587 1.5339791899378274 1.497252528904268 1.385015113828172 0.8620920880119756 1.0533454196965935 0.9752360568804522 1.1744676529789235 1.2805881901422387 1.0 11.424540705339997 -7.11838278156567 5.916666835804031 1.0596442154963015 1.4558776394750523 0.7424381991784124 0.11513423003794016 0.08193731799950096 3.6891315281662393 0.015178708094766534 0.02653463215447683 7.614076193172572e-08 7.11838278156567 0.39623342397875083 DLDEEGS(ph)EKELHENVLDK ddPTM_A549_MK2206_60min_R1 2 DLDEEGSEKELHENVLDK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK 168.56 1.4466e-30 40722000.0 7411.700000000001 6440.7 5628.0 5219.700000000001 6262.799999999999 5450.4 6062.3 6538.4 6625.5 6713.7 6768.9 True False 8662.6137613326 6768.5041195460435 6426.135027601763 6498.52673432124 5341.550416280991 6027.1577103172895 7163.741438317763 7465.238223010213 5124.834828749405 5197.070507132848 5087.995317863778 1.7025593028591157 1.3302889835181366 1.2629993988083719 1.27722734168114 1.04983398815777 1.18458397340818 1.4079693456411233 1.4672258437031214 1.0072404765696785 1.0214377534676793 1.0 12.31288162767079 -2.0000000000108473 0.1402586126715853 0.9025742200492136 3.0320344354413598 0.4305928399187282 0.16123135609966158 44.50601160542318 0.3975324465957393 0.3823095307356364 19.160456529483 0.009999999999750231 2.0000000000108473 2.1294602153921462 DLDEEGS(ph)EKELHENVLDK ddPTM_A549_PD325901_60min_R1 3 DLDEEGSEKELHENVLDK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK 200.23 4.6217e-49 73946000.0 6571.200000000001 6118.700000000001 7974.4 8772.3 6390.700000000001 5133.1 5033.1 4196.5 5814.799999999999 6424.8 5790.1 True False 7238.303386538234 6634.344322579516 8515.59073796272 9314.1450476612 5941.839278718133 5091.297735473881 5224.637374717998 4112.797515409435 5570.424177511696 6019.137031536771 5077.954406468012 1.4254368604252317 1.3064993876528435 1.676972665827019 1.8342317205127654 1.1701245822825335 1.0026276976785915 1.0288862318383853 0.8099319501905698 1.096981920597082 1.185346804979173 1.0 12.3100317261505 -6.936437628926746 6.488329068998847 1.025399084795033 1.5494616487126582 0.7371287855201866 0.15096655648512383 0.0806418372724778 6.381143040149461 0.021457632768800885 0.04076349110191465 1.1576102700105528e-07 6.936437628926746 0.5240625639176253 DLDEKKKEPAITS(ph)QNSPEAR ddPTM_A549_PD325901_60min_R1 1 DLDEKKKEPAITSQNSPEAR 20 3 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 DLDEKKKEPAIT(0.073)S(0.545)QNS(0.383)PEAR 75.23 0.00010798 8500200.0 924.2 1126.3 1397.2 1836.5 1335.4 2412.2 2177.1 1953.7 1881.0 1550.4 1720.1 True False 1018.024103639919 1221.2172537501938 1492.0223940461374 1949.9364340058823 1241.6061108799033 2392.555842962361 2259.9507318548317 1914.7319208519996 1801.9481113537017 1452.5074794070806 1508.5386046122908 0.6748412672551798 0.8095366270484398 0.9890515161390926 1.2925996245929916 0.8230522620261403 1.5860090259852988 1.4981059980468059 1.2692627918157284 1.1944991701533685 0.9628573474792773 1.0 10.558935901246183 -5.795337302453266 1.965041307851072 1.1630809240380227 0.6845743603748939 0.4036968737149932 0.21494983361202474 0.3118409760507825 2.2181328526350397 0.031722205575607294 0.1837357115223079 1.6020006853628066e-06 5.795337302453266 -0.4785065636631287 DLDEKKKEPAITSQNS(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 DLDEKKKEPAITSQNSPEAR 20 3 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 DLDEKKKEPAIT(0.047)S(0.207)QNS(0.746)PEAR 68.689 0.0003411 8245300.0 1022.5 1106.6 1415.0 1783.3 1205.9 2354.7 2080.6 2308.7 2134.5 1617.6 1735.5 True False 1126.303447275284 1199.857065613037 1511.0304090862323 1893.4503908318495 1121.201744129155 2335.5241038982977 2159.7783715480055 2262.6511673598875 2044.7943879236973 1515.4644599386577 1522.0445022409328 0.7399937686559149 0.7883193059378135 0.9927636195009514 1.2440177590366703 0.736641893504684 1.5344650570069827 1.418998175393772 1.4865867351634898 1.343452431852755 0.9956768397424732 1.0 10.57179482630492 -5.912220419466897 0.9689300327403314 1.220351998664901 0.6620319403019062 0.3951446132982006 0.22346620303149614 0.7940878518584072 1.010442363902809 0.03702816967463118 0.36341625621393164 1.2239948218968948e-06 5.912220419466897 -0.5583200583629948 DLDELS(ph)RYPEDK ddPTM_A549_MK2206_60min_R1 2 DLDELSRYPEDK 12 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 DLDELS(1)RYPEDK;DLDELS(1)RYPEDK 71.344 0.00071072 5892900.0 949.95 1474.76 1128.4499999999998 1328.7 1644.1399999999999 1371.99 912.12 1370.6399999999999 1473.1 1464.8200000000002 1708.5300000000002 True False 1110.2783359523332 1549.8189847907404 1288.4811783754806 1654.2315596476103 1402.2891839790886 1517.173071146746 1077.8403973274828 1564.9324174089543 1139.4452020573158 1133.9161446383275 1284.254847970837 0.8645311619470293 1.2067846091758991 1.0032908814098083 1.2880866770807586 1.0919088109301276 1.181364488165201 0.8392729831080681 1.2185528595680184 0.8872422820577044 0.882937017080333 1.0 10.32671580442855 -8.779825118145528 24.996549318349558 0.9467532988320712 1.089736219492172 0.21246299328500218 0.13797520221629297 278.80769150839603 379054.7313113546 0.022165729252717734 0.023618723133518465 1.6602553250464863e-09 8.779825118145528 0.14298292066010088 DLDELS(ph)RYPEDK ddPTM_A549_PD325901_60min_R1 1 DLDELSRYPEDK 12 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 DLDELS(0.995)RY(0.005)PEDK 52.453 0.0069161000000000005 6735000.0 1625.8 1314.6 1622.0 1710.3 1562.2 1858.5 1746.5 1546.0 1759.5 1918.2 2099.7 True False 1790.8500191492974 1425.3859555891013 1732.0786738783534 1815.9413466268782 1452.4764612974272 1843.3649921837118 1812.96401322147 1515.1638171864631 1685.5543338260704 1797.084524637941 1841.450211094951 0.9725215530451046 0.7740562014660975 0.940605759223018 0.9861474047387331 0.7887677074004434 1.0010398223515489 0.9845305630845469 0.8228100917730088 0.9153407046633192 0.9759072028178108 1.0 10.846626675015424 -10.472450658627137 0.6921500150221682 1.0042848141338296 0.9073101366999138 0.1268870834732857 0.0774878735905392 1.1116245319075782 0.911527408186512 0.05986817182393971 0.015076993259489288 3.3693749394866486e-11 10.472450658627137 -0.09697467743391586 DLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKK ddPTM_A549_MK2206_60min_R1 1 DLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKK 33 1 Q15029-3;Q15029;K7EIV5;K7EIT3 Q15029-3 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component 0 50.229 0.0050051 2735900.0 435.41 472.06 336.3 212.93 486.86 328.14 277.81 462.91 446.25 390.4 353.79 False True 508.896563247545 496.0858376687167 383.99239690520096 265.0978595587909 415.243538939542 362.8635569982969 328.28448096911364 528.5289101024188 345.1750875148174 302.20836885542434 265.9341788927339 1.9136184952473199 1.8654459525821834 1.4439377386691108 0.9968551641709796 1.5614523137585596 1.364486349626612 1.234457647888612 1.9874425780960032 1.2979718851936133 1.136402887788718 1.0 8.054925399652427 -2.0000000000567835 0.04655598506182221 1.6496441677353907e-12 4.052288892827471 0.3102613487499959 0.28218490629074017 362.27254055714167 1.2422197031359776 26.485654762544783 107.48372113547732 0.009999999998692513 2.0000000000567835 4.052288892825822 DLDENEVERPEEENASANPPS(ph)GIEDETAENGVPKPK ddPTM_A549_MK2206_60min_R1 2 DLDENEVERPEEENASANPPSGIEDETAENGVPKPK 36 2 Q6UN15;A0A0B4J203 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DLDENEVERPEEENASANPPS(0.835)GIEDET(0.165)AENGVPKPK;DLDENEVERPEEENASANPPS(0.5)GIEDET(0.5)AENGVPKPK 104.0 1.3543000000000001e-14 31662000.0 3574.2000000000003 5013.9 3643.9 2800.1 6121.5 3903.8 4092.8999999999996 4296.700000000001 6747.0 6387.5 5702.0 True False 4177.437579199778 5269.086093901577 4160.659812913655 3486.124625701265 5221.035459102016 4316.897524867281 4836.52695064427 4905.770383091884 5218.815272745033 4944.559313688588 4286.03603280581 0.9746622630386664 1.2293611284579482 0.9707477447850389 0.8133680162784607 1.2181501553275833 1.0072004742436262 1.128438238415389 1.1445938264500244 1.2176321507331307 1.1536438974946468 1.0 12.065428263498697 -6.815858967761971 24.999944137180176 1.1094760218717235 1.0117430519084705 0.21788000370670346 0.1125179350586666 148.14120063197166 68054.33864870324 0.01785080172252304 0.03373487172212848 1.528062198651804e-07 6.815858967761971 -0.09773296996325298 DLDENEVERPEEENASANPPS(ph)GIEDETAENGVPKPK ddPTM_A549_PD325901_60min_R1 2 DLDENEVERPEEENASANPPSGIEDETAENGVPKPK 36 2 Q6UN15;A0A0B4J203 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DLDENEVERPEEENASANPPS(1)GIEDETAENGVPKPK;DLDENEVERPEEENAS(0.006)ANPPS(0.994)GIEDETAENGVPKPK 202.7 7.0774999999999995e-90 52022000.0 7792.9 6917.2 7068.0 6743.4 8660.9 8137.700000000001 7870.1 7997.8 7476.9 8581.4 8617.0 True False 8584.029471170232 7500.136719915515 7547.676983336742 7159.924502627423 8052.588262482961 8071.4292692458375 8169.600962183963 7838.277604847281 7162.6718946201445 8039.5689394891115 7557.163627663569 1.1358797948674477 0.9924539270872338 0.9987446818946594 0.9474354209319986 1.0655569548614579 1.068050086900297 1.081040634382789 1.037198344648073 0.9477989689677543 1.06383417583545 1.0 12.883629145018336 -8.743986143447986 24.138320703784295 0.975349516768588 1.037745394645828 0.013233156431136206 0.055695172506897254 171.77535401281133 237569.72068734266 0.008633142553806598 0.009776447690507506 1.803075268663206e-09 8.743986143447986 0.06239587787723988 DLDIIDNYDY(ph)SHTVK ddPTM_A549_MK2206_60min_R1 1 DLDIIDNYDYSHTVK 15 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 DLDIIDNYDY(0.999)S(0.001)HTVK 158.81 5.9868e-20 1760900.0 644.68 780.39 578.88 797.47 1180.3 627.56 995.63 681.3 1183.0 1163.2 1245.4 True False 753.4862230872674 820.1085176848068 660.9738885533241 992.850185799788 1006.6794335339555 693.9679826593867 1176.523083356534 777.8763613937437 915.0523888628101 900.4323121225151 936.1328087085866 0.8048924426938057 0.8760600099212017 0.7060685005423006 1.0605868916926906 1.0753596329164976 0.7413136001682593 1.256790780551288 0.8309465859516656 0.9774813790846009 0.9618638549424189 1.0 9.870569408550656 -6.266390350966388 24.984504873336704 0.9891797840851159 0.8037122862848383 0.30171983265742885 0.13017016128498327 346.007417814606 1746090.2162417222 0.016074646993164788 0.03846494790075165 5.415139500256736e-07 6.266390350966388 -0.1854674978002776 DLDIIDNYDY(ph)SHTVK ddPTM_A549_PD325901_60min_R1 2 DLDIIDNYDYSHTVK 15 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 DLDIIDNYDY(0.981)S(0.019)HTVK;DLDIIDNYDY(0.988)S(0.012)HTVK 185.12 1.0432e-33 6927800.0 2134.5 1926.25 1877.4499999999998 2433.2 2266.3 2031.21 2123.99 2680.7 2261.4 2655.7 2853.3999999999996 True False 2351.1928686641504 2088.5818476749632 2004.8650470239913 2583.4932378018593 2107.12290631056 2014.6684992055295 2204.819601741926 2627.231335531533 2166.3612222303354 2488.0186487754013 2502.4498891929006 0.9395564238141311 0.8346148535060498 0.8011609166210348 1.0323856029880771 0.8420240163091367 0.8050784584762686 0.88106443660018 1.049863714305535 0.8656961450401064 0.9942331550854137 1.0 11.289125464477909 -14.99999997895151 0.25960707019076695 1.740285809686542 0.8791165009110357 0.21118592801969605 0.07873666708554325 51.96241380429944 0.6747586999556925 19.8872681133824 0.03730784867891164 1.0000000484659386e-15 14.99999997895151 -0.8611693087755062 DLDIIDNYDYS(ph)HTVK ddPTM_A549_MK2206_60min_R1 1 DLDIIDNYDYSHTVK 15 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 DLDIIDNY(0.004)DY(0.439)S(0.504)HT(0.053)VK 77.146 0.00017745 1469300.0 769.56 976.13 1006.2 702.08 945.89 977.03 831.11 843.44 1245.5 1454.5 1282.2 True False 899.4429140643997 1025.8108476116693 1148.894290116008 874.0896315175687 806.7508340129067 1080.4186660999744 982.1119289379077 963.0002029266687 963.3962386548009 1125.927439805879 963.7943530802551 0.9332311516350036 1.0643461899659523 1.1920533529213775 0.9069254542984269 0.8370570251159467 1.1210053914997447 1.0190056891276758 0.9991760170091802 0.9995869301120287 1.1682237359115581 1.0 9.91258153805435 -6.28590699005566 24.91288501826861 0.9931842484128679 1.0633239058287847 0.04764246558696106 0.10139029444713776 1165.5430302660957 1186752.2989795315 0.011789540623508411 0.02740914255831082 5.17717696214774e-07 6.28590699005566 0.07013965741591677 DLDIIDNYDYSHTVK ddPTM_A549_PD325901_60min_R1 2 DLDIIDNYDYSHTVK 15 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 202.13 1.0911999999999999e-38 11734000.0 2969.3 3091.1 3001.3 3185.1000000000004 3534.4 3744.0 2801.3999999999996 3242.0 3437.1000000000004 3803.7 3760.7000000000003 False True 3270.7411501168717 3351.597845216393 3204.986266283045 3381.8363931130593 3286.1559370180657 3713.5101053192443 2908.0088099849004 3177.335766700199 3292.6506398372167 3563.5337328564983 3298.1577410414734 0.991687301494578 1.0162030164627738 0.9717504491677201 1.02537133110109 0.9963610582131776 1.1259346571297142 0.8817070129176496 0.9633668296583286 0.9983302492977435 1.0804618858924637 1.0 11.68744468488566 -7.763674829050682 24.99990716955442 0.9879212125631913 1.0178004090438293 0.08931057559847455 0.05698279995769893 125.49694925178721 1403489.6294867662 0.007555084530242056 0.010723378810542116 1.723158278916006e-08 7.763674829050682 0.02987919648063797 DLDITS(ph)PELR ddPTM_A549_MK2206_60min_R1 2 DLDITSPELR 10 0 P19474-2;P19474 P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 1 DLDIT(0.393)S(0.607)PELR;DLDIT(0.397)S(0.603)PELR 58.676 0.010718 3686100.0 928.81 1195.85 985.3299999999999 1093.3899999999999 1291.62 1129.6599999999999 1032.98 1016.5799999999999 1853.0 1500.77 1567.59 True False 1085.5704207757105 1256.7136571116696 1125.0646102961693 1361.2705990841428 1101.624408998668 1249.1998713923806 1220.6590948903022 1160.6833281456804 1433.2984586329558 1161.7450146699675 1178.3141397169525 0.9212911771019566 1.0665353276788734 0.9548087155827779 1.1552696799608455 0.9349157171815774 1.0601586022658236 1.0359368981038635 0.9850372570632928 1.216397572023751 0.9859382786911434 1.0 10.20250849903725 DLDITS(ph)PELR ddPTM_A549_PD325901_60min_R1 2 DLDITSPELR 10 0 P19474-2;P19474 P19474-2 TRIM21 E3 ubiquitin-protein ligase TRIM21 1 DLDIT(0.049)S(0.951)PELR;DLDIT(0.167)S(0.833)PELR 97.81299999999999 0.00050756 4932500.0 2143.5 2313.8999999999996 2191.7 2178.1 2526.6000000000004 2124.2 2147.7 1918.0500000000002 2117.8 1880.26 2257.4 True False 2361.1065420387004 2508.900473632757 2340.441941762755 2312.636290175993 2349.1403322968113 2106.9012194762663 2229.431898766536 1879.7929880688832 2028.7962308478832 1761.54006271282 1979.7541108376165 1.1926261595384373 1.267278830183241 1.182188196478872 1.1681431939027707 1.1865818686457534 1.0642236871450945 1.1261155547358772 0.9495083140772261 1.0247718238046832 0.8897771966072735 1.0 10.95110554067195 -7.412283730565656 0.8530969220833847 1.0066590929935226 1.2208443620505085 0.7740328819508717 0.0535709028494728 0.15379532925575023 0.22240810598577895 0.006805743696446459 0.015224033593814837 3.8700472679574395e-08 7.412283730565656 0.21418526905698587 DLDLEPLS(ph)DLEEGLEETR ddPTM_A549_PD325901_60min_R1 1 DLDLEPLSDLEEGLEETR 18 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 DLDLEPLS(0.984)DLEEGLEET(0.016)R 93.75399999999999 2.2529e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DLDLLASVPS(ph)PSSSGSR ddPTM_A549_PD325901_60min_R1 2 DLDLLASVPSPSSSGSR 17 0 Q8WU79;A0A087WV97;Q8WU79-3;Q8WU79-2 Q8WU79 SMAP2 Stromal membrane-associated protein 2 1 DLDLLAS(0.007)VPS(0.959)PS(0.024)S(0.007)S(0.002)GS(0.002)R;DLDLLASVPS(0.99)PS(0.004)S(0.004)S(0.001)GS(0.001)R 113.29 2.2507e-09 16210800.0 3308.6 3753.8 4183.6 3674.1 4740.5 4577.8 3957.3999999999996 3688.2999999999997 4225.6 3838.3 4268.1 True False 3644.486636337412 4070.1458999622455 4467.524254030506 3901.0408125134827 4407.543633837184 4540.519914564754 4108.001022572373 3614.733963084622 4048.0127269198283 3595.949082951622 3743.150757715085 0.9736414246275509 1.0873582613719697 1.1935197226086607 1.0421810568203718 1.177495623106471 1.2130208502038542 1.0974714320830619 0.965692860656018 1.0814452820465181 0.9606743932340789 1.0 11.870037439506413 -9.601074867011992 0.4978551786652831 1.0042727441552564 1.1094682175721053 0.24242231349846743 0.07704936837455248 1.1413132961002035 0.6235106676994692 0.04956389212495835 0.02342383347682954 2.505677267943342e-10 9.601074867011992 0.10519547341684898 DLDRPESQS(ph)PK ddPTM_A549_MK2206_60min_R1 4 DLDRPESQSPK 11 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 DLDRPES(0.207)QS(0.793)PK;DLDRPES(0.234)QS(0.766)PK;DLDRPES(0.076)QS(0.924)PK;DLDRPES(0.169)QS(0.831)PK 113.25 2.6461e-05 545290000.0 13810.2 14183.0 13994.7 12281.7 19677.2 15950.9 13637.400000000001 14527.599999999999 21727.300000000003 19535.9 19437.9 True False 16141.024133026896 14904.854119508986 15979.358896726791 15290.717051346459 16782.709946229214 17638.813650649518 16115.139054635156 16586.93178890908 16806.101241368488 15122.7266217282 14610.932971251515 1.1047223448896788 1.0201165215688683 1.0936576691007887 1.0465257134114905 1.1486405405630762 1.2072339039098778 1.1029507209665061 1.135241111676136 1.1502414852245362 1.035028129379807 1.0 13.834760682949122 -4.8857361895090134 19.197304981635227 1.0882808189690587 3.673358307626288 0.0 0.06112643713793026 3694.1847903590933 591408.0533628203 0.009780631333237352 19766.21468374691 1.3009596009017674e-05 4.8857361895090134 2.5850774886572294 DLDRPESQS(ph)PK ddPTM_A549_PD325901_60min_R1 4 DLDRPESQSPK 11 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 DLDRPES(0.024)QS(0.976)PK;DLDRPES(0.081)QS(0.919)PK;DLDRPES(0.171)QS(0.829)PK;DLDRPES(0.294)QS(0.706)PK 133.0 5.813e-08 823226000.0 34105.200000000004 35239.1 35920.1 33086.1 39581.3 30945.700000000004 34346.0 34177.7 35959.9 37217.7 37441.9 True False 37567.534797078755 38208.82262863219 38357.853991108386 35129.753253014984 36801.24603607209 30693.688479214143 35653.055824852345 33495.99896161303 34448.63045692078 34867.76807038757 32836.78366375961 1.144068651234568 1.1635982080303875 1.168136757359769 1.0698292991400986 1.1207323595668677 0.9347349239045387 1.0857657738325 1.020075513625318 1.0490866221754869 1.061850893419548 1.0 15.003025202780028 -6.678979304274658 1.436333984900555 1.0238970641366023 1.1592871586973197 0.5863896813870404 0.044508253179599264 0.18671178449838993 0.7658982691341286 0.0061854571504757275 0.01732015982782732 2.094212250369772e-07 6.678979304274658 0.13539009456071738 DLDT(ph)SDRKEDVLSTSK ddPTM_A549_MK2206_60min_R1 3 DLDTSDRKEDVLSTSK 16 2 H0YLV8;H0YNU5;A0A3B3IT82;P54132 H0YLV8 BLM Bloom syndrome protein 1 DLDT(0.544)S(0.456)DRKEDVLSTSK;DLDT(0.526)S(0.474)DRKEDVLSTSK;DLDT(0.5)S(0.5)DRKEDVLSTSK 96.71799999999999 1.5956e-06 44173500.0 6982.6 6929.0 6003.639999999999 5976.900000000001 9962.199999999999 8009.5 7376.8 7340.6 9991.3 9566.6 10927.9 True False 8161.092171820365 7281.656503848108 6855.046428058106 7441.240768313241 8496.77357684654 8857.059973724196 8717.069073154164 8381.152529644673 7728.28650282755 7405.498415707743 8214.200835303158 0.9935345306807521 0.8864716908981404 0.834536014580548 0.9058995412349946 1.034400515303806 1.0782619211911821 1.0612193745847762 1.0203247641114381 0.9408446004403452 0.9015482533468433 1.0 13.003904505969047 -6.698626953746778 8.297213346790544 0.9937682857598303 0.8982240435945055 0.3868084670382109 0.059323582598767605 0.23618409294596274 27.9302539707349 0.008654456491744743 0.018025834340614735 2.0015804304571964e-07 6.698626953746778 -0.09554424216532487 DLDT(ph)SDRKEDVLSTSK ddPTM_A549_PD325901_60min_R1 3 DLDTSDRKEDVLSTSK 16 2 H0YLV8;H0YNU5;A0A3B3IT82;P54132 H0YLV8 BLM Bloom syndrome protein 1 DLDT(0.5)S(0.5)DRKEDVLSTSK;DLDT(0.5)S(0.5)DRKEDVLSTSK;DLDT(0.5)S(0.5)DRKEDVLSTSK 107.45 2.4831e-07 64174000.0 11062.2 11861.599999999999 11112.3 11247.800000000001 13528.5 12498.699999999999 11569.2 12293.8 12857.8 11949.800000000001 13402.2 True False 12185.226400438782 12861.218660288818 11866.447501688293 11942.551060392787 12578.304830791338 12396.914731130777 12009.472236909163 12048.590514700476 12317.43138020394 11195.287588634377 11753.814363545629 1.0367040029346706 1.0942165889719848 1.0095826881945655 1.01605748491592 1.0701466299997777 1.0547141844931394 1.0217510559088339 1.0250791906386656 1.0479518392264526 0.9524812322505689 1.0 13.520841397646985 -14.999999978535632 0.25049481170390464 0.7268035655062541 1.0469551921960245 0.4263271432575202 0.027333736051447545 39.92919305492409 0.5138347204465431 5.413424888448486 0.012040246161199123 1.0000000494235352e-15 14.999999978535632 0.3201516266897704 DLDTS(ph)DRKEDVLSTSK ddPTM_A549_MK2206_60min_R1 1 DLDTSDRKEDVLSTSK 16 2 H0YLV8;H0YNU5;A0A3B3IT82;P54132 H0YLV8 BLM Bloom syndrome protein 1 DLDT(0.129)S(0.871)DRKEDVLSTSK 89.66799999999999 3.6912e-06 6873100.0 4745.5 4581.6 4747.0 3856.5 5349.0 4277.9 4008.2 4463.0 6656.2 6267.5 6186.4 True False 5546.4243836641845 4814.783870404173 5420.195980104039 4801.342673124864 4562.16918577745 4730.5845385598 4736.438057018831 5095.643917364272 5148.581327767231 4851.667397032203 4650.146144045929 1.19274195086661 1.0354048499247808 1.1655969107646404 1.0325143607094 0.9810808186359639 1.0172980358083725 1.0185568174203279 1.0958029617819132 1.107186993329124 1.0433365418513356 1.0 12.183060342383216 -2.000062937216025 0.007527522905508618 2.0400454116484165e-07 2.2475903878893493 0.15197245077191357 0.060327437112460955 29927.68755638421 16.95077763711379 2255.8502923795327 2836.8557862445077 0.009998550922047352 2.000062937216025 2.247590183884808 DLDTS(ph)DRKEDVLSTSK ddPTM_A549_PD325901_60min_R1 1 DLDTSDRKEDVLSTSK 16 2 H0YLV8;H0YNU5;A0A3B3IT82;P54132 H0YLV8 BLM Bloom syndrome protein 1 DLDT(0.089)S(0.91)DRKEDVLSTSK 72.771 0.00024733 10865000.0 4588.4 4517.8 3798.9 4767.3 5696.0 5227.4 4484.2 5671.1 5022.9 5400.6 5991.9 True False 5054.2109901984495 4898.530861220481 4056.716198641476 5061.765293676149 5295.932610133239 5184.829787538945 4654.8486848483935 5557.985461608116 4811.804980605265 5059.605194327835 5254.934285783605 0.9618028914028134 0.9321773774550678 0.7719822890300038 0.9632404552365108 1.007801871939778 0.9866593006815867 0.885805308249306 1.0576698316940647 0.915673673336476 0.9628293940831568 1.0 12.359457007714072 -6.469136967627421 24.99961762690107 0.9666132931880279 0.8887739463575836 0.2662839088191804 0.061423104849567436 348.1572232373657 161955.5096616518 0.008560910500519834 0.01989362978098797 3.3951817859049406e-07 6.469136967627421 -0.07783934683044436 DLEAEHVEVEDTTLNR ddPTM_A549_MK2206_60min_R1 2 DLEAEHVEVEDTTLNR 16 0 H3BV85;H3BTW0;A0A0B4J295;A0A087WZT3;H3BVE0;Q9H3K6-2;Q9H3K6 H3BV85 BOLA2B;BOLA2 BolA-like protein 2 0 ; 102.38 1.2264e-06 3907800.0 225.2 128.71 178.14 233.63 311.4 241.69 317.86 348.89 440.1 473.12 491.55 False True 263.2082543886156 135.2607892351408 203.4029306711047 290.8693604880492 265.59347250908553 267.2654753791622 375.6110475535168 398.3462259308138 340.4180526952853 366.2418634038894 369.48456891015365 0.7123660269899366 0.36607967048288753 0.5505045346577533 0.7872300630741063 0.7188215553696615 0.7233467859496786 1.0165811488729666 1.0781132947061676 0.9213322594212687 0.9912237051852285 1.0 8.529370302937298 -7.016614388999845 0.858488067890178 0.9761466377494 0.5269361475083737 0.7313704722815845 0.1089422166420986 0.2354156116873237 0.33196959607722376 0.018678686379746578 0.055799267022102514 9.624664751495673e-08 7.016614388999845 -0.44921049024102633 DLEAEHVEVEDTTLNR ddPTM_A549_PD325901_60min_R1 2 DLEAEHVEVEDTTLNR 16 0 H3BV85;H3BTW0;A0A0B4J295;A0A087WZT3;H3BVE0;Q9H3K6-2;Q9H3K6 H3BV85 BOLA2B;BOLA2 BolA-like protein 2 0 ; 94.48700000000001 7.217999999999999e-06 5063200.0 362.06 113.98 174.65 296.68 288.24 288.88 0.0 277.15 223.26 252.76 410.14 False True 398.8160646655154 123.58549461284477 186.50279925576717 315.00524979083315 267.9950167740176 286.52745705785867 0.0 271.62202583003096 213.87715860756373 236.8006904637086 359.69538009167195 1.1087605978255077 0.3435837696368182 0.518502070302474 0.8757556177411868 0.7450610477835895 0.7965836452634846 0.0 0.7551446053068721 0.5946063542797102 0.6583367581850998 1.0 8.490631819468653 -10.637670160183285 0.8696494472617889 1.004247601884914 0.62453799366431 0.011290500595632413 0.2932586392244906 0.7786201195563275 1.030922388390062 0.18943378248737258 0.04873568862830271 2.303190390132381e-11 10.637670160183285 -0.37970960822060407 DLEDSLAR ddPTM_A549_MK2206_60min_R1 1 DLEDSLAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 74.127 0.01408 1370000.0 417.85 334.25 279.26 408.84 603.25 333.39 376.06 404.17 584.87 578.64 564.22 False True 488.3728645483258 351.2618973028189 318.863267201149 509.00581835352483 514.5127241204426 368.66910851362877 444.3852342005145 461.46233521871375 452.3978788454703 447.92482211706664 424.1086023201852 1.1515278442280301 0.8282357287288177 0.7518434322169675 1.200178009992935 1.2131626694334436 0.8692799591820074 1.047809999064865 1.088075867110868 1.066702906685981 1.0561559460633179 1.0 8.728289935615951 -6.260971932618438 24.99999940011929 1.0477589329040244 0.9023056842587962 0.2219511755403012 0.12685619305817264 49.431272025536764 2643566.969747409 0.017137297633150226 0.04250211368237299 5.483123998542798e-07 6.260971932618438 -0.14545324864522824 DLEGAVS(ph)R ddPTM_A549_MK2206_60min_R1 1 DLEGAVSR 8 0 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 DLEGAVS(1)R 51.445 0.029195999999999996 5601700.0 294.08 337.76 385.31 509.67 572.34 458.45 501.53 452.43 812.74 489.23 550.99 True False 343.71351443429865 354.9505413103966 439.9527518630481 634.5391728799559 488.1495441742133 506.9628747055191 592.6515090905281 516.5633380087652 628.6556876790871 378.71260321500876 414.16397644960955 0.8298971759464878 0.8570290066103388 1.0622670654133441 1.5320964858399724 1.1786383459972536 1.2240631815722394 1.4309586125065483 1.2472435252263288 1.5178907954964893 0.9144025669772028 1.0 8.69405826468122 -5.957358877706733 4.030891648412561 1.273194391200159 0.8509159652494068 0.42842474356829396 0.18351693745644324 0.1552964692911815 5.422779462057577 0.027704515635386118 0.09148464344951815 1.1031666453008452e-06 5.957358877706733 -0.42227842595075227 DLEGAVS(ph)R ddPTM_A549_PD325901_60min_R1 1 DLEGAVSR 8 0 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 DLEGAVS(1)R 46.818999999999996 0.038846 6553800.0 544.65 288.61 367.38 622.83 476.91 634.32 524.48 398.15 513.83 543.18 577.13 True False 599.9424670498619 312.9321775768831 392.31261603540673 661.3007945504403 443.4134868501828 629.1543082281257 544.4393734064687 390.20858590736725 492.2355119919577 508.8835221003215 506.14666872849915 1.1853134755524302 0.6182638292631779 0.7750967066936207 1.306539853777378 0.8760573056108231 1.24302765798822 1.0756553525762906 0.7709397493173625 0.9725155619980905 1.0054072337939073 1.0 8.983411692453876 DLEGLSQR ddPTM_A549_MK2206_60min_R1 1 DLEGLSQR 8 0 P35579 P35579 MYH9 Myosin-9 0 58.815 0.038286 6398000.0 1768.6 2569.8 1971.9 1845.6 2692.2 2208.3 1837.0 2060.9 3213.0 2819.6 3355.2 False True 2067.0964418814615 2700.5918434967357 2251.545071238079 2297.7720828521337 2296.180946335776 2441.980840249096 2170.7591214868507 2353.0388862415484 2485.2606301066858 2182.650401702753 2522.011241190821 0.8196222158412896 1.0708088050478293 0.8927577460657806 0.9110871693685204 0.9104562695174926 0.9682672306789812 0.8607253948883594 0.9330009509119045 0.9854280542116924 0.8654403937835615 1.0 11.300358990769976 -8.7634864980017 4.104700479740917 0.9936249376658988 0.9233456434806326 0.0 0.07146844024878107 0.2193434597142601 8.274117717379644 0.009572263814018787 0.010449618411804577 1.723905685559671e-09 8.7634864980017 -0.07027929418526613 DLEGSDIDTR ddPTM_A549_MK2206_60min_R1 2 DLEGSDIDTR 10 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 ; 80.23899999999999 0.0033329 1801920.0 605.5 754.78 724.5699999999999 663.6 1027.43 825.46 724.38 584.22 1104.3899999999999 1340.17 723.3199999999999 False True 707.6935969462999 793.1950780739609 827.3249212774351 826.1820297901356 876.2964080282915 912.8096293039986 855.9904694734043 667.0349740987133 854.2474283484345 1037.4246662115115 543.6996813835672 1.3016259180903196 1.458884574027147 1.5216579108012702 1.5195558468743775 1.6117287503247317 1.6788857168007667 1.5743810393545614 1.2268445190206687 1.5711751498080855 1.908084006176993 1.0 9.086666172469352 -10.857926182141561 0.6854513492101578 0.9278592088093959 1.5103902298279597 0.0 0.2981892887252338 0.47245455731418073 0.31132560047870317 0.167333297200917 0.02535940965527769 1.3869915584286975e-11 10.857926182141561 0.5825310210185638 DLEGSDIDTR ddPTM_A549_PD325901_60min_R1 2 DLEGSDIDTR 10 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 ; 105.78 0.00085883 2578700.0 914.1700000000001 1063.5500000000002 999.87 1106.59 1269.74 1038.45 1119.1799999999998 1283.95 1003.51 1167.3 1528.0900000000001 False True 1006.9758654236148 1153.1790910290501 1067.7271909067504 1174.941551051766 1180.557842765199 1029.9932074969997 1161.7710073387957 1258.3406100107097 961.3359645000278 1093.596478787336 1340.1446173606155 0.7513934334988644 0.8604885443633764 0.7967253511860645 0.8767274336151772 0.8809182438013898 0.7685687008358456 0.8668997302894649 0.9389588210927438 0.7173374813782092 0.8160287066191032 1.0 10.388172977502817 -11.058593888292048 1.3629291160091372 1.0001157603136208 0.8201718419836916 0.0 0.08209273610038569 0.2953142769390652 0.9775458094008181 0.04854700995911093 0.010748758544391295 8.73788071613029e-12 11.058593888292048 -0.17994391832992918 DLEIAKEYDLPDAKS(ph)R ddPTM_A549_MK2206_60min_R1 2 DLEIAKEYDLPDAKSR 16 2 Q96NG3;A0A087WTJ8 Q96NG3 TTC25 Tetratricopeptide repeat protein 25 1 DLEIAKEY(0.004)DLPDAKS(0.996)R;DLEIAKEYDLPDAKS(1)R 56.54 0.003372 16757600.0 3781.03 4454.63 4136.030000000001 4317.6900000000005 5035.280000000001 4777.12 3797.25 4300.34 6700.6 6181.29 6823.6900000000005 True False 4419.1754266917715 4681.35163973689 4722.581247017005 5375.524243828472 4294.59698219508 5282.631667604386 4487.161172599856 4909.926364238913 5182.924798659462 4784.932295907649 5129.179448736703 0.8615755153156509 0.9126901654590948 0.9207284116721941 1.0480281100620183 0.8372873332113234 1.02991749857874 0.8748302174736793 0.9572537699861932 1.0104783524265262 0.9328845566294545 1.0 12.324512330782103 -2.0000000005162 0.16280394078847948 1.0210728811335164 0.47746310914248646 0.08598997497184613 0.06480691022480937 51.44659042249052 0.5082675301801476 0.0797946913391778 6.801670871226737 0.009999999988114057 2.0000000005162 -0.5436097719910299 DLEIAKEYDLPDAKS(ph)R ddPTM_A549_PD325901_60min_R1 2 DLEIAKEYDLPDAKSR 16 2 Q96NG3;A0A087WTJ8 Q96NG3 TTC25 Tetratricopeptide repeat protein 25 1 DLEIAKEY(0.001)DLPDAKS(0.999)R;DLEIAKEY(0.001)DLPDAKS(0.999)R 58.997 0.0019513999999999998 17934600.0 9858.9 9995.900000000001 9756.1 11348.400000000001 13279.8 11692.7 11881.2 13205.0 12377.6 12197.1 12045.5 True False 10859.768270261415 10838.289573614107 10418.207614195193 12049.364893913622 12347.072660822916 11597.478527902334 12333.345567642104 12941.615915877903 11857.412516263468 11426.973024429895 10563.979862715743 1.0279997133078245 1.0259665120970654 0.9862010103753571 1.1406084686359883 1.168789870984171 1.097832320642166 1.1674904465854878 1.2250701046443424 1.122438008246564 1.0816920491073614 1.0 13.366865836073584 -6.253190157493791 24.582008284315187 1.0939721524480555 1.0146468207480797 0.3204177396588128 0.061264423583475815 707.6572366543397 2108752.729459715 0.01128127693986238 0.029251795543735807 5.582257199600127e-07 6.253190157493791 -0.0793253316999758 DLELALS(ph)PIHNSSALPTTGR ddPTM_A549_MK2206_60min_R1 2 DLELALSPIHNSSALPTTGR 20 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR 80.061 6.6271e-05 3577300.0 993.09 1047.78 896.3299999999999 757.85 1180.07 1064.48 900.73 771.58 1811.49 1323.92 1398.0 True False 1160.6993132805962 1101.1075265697748 1023.4430720131988 943.5232840211789 1006.4832662292765 1177.1225670553636 1064.3809817620302 880.9538278646486 1401.1904073551061 1024.8455524976278 1050.8380171628417 1.1045463661605708 1.0478375435470595 0.9739303825116582 0.8978769977970517 0.9577910675012324 1.1201750867688225 1.0128877756400108 0.8383345610612152 1.3334028503633522 0.97526501302704 1.0 10.037324584936181 -8.757424541943719 24.999996932439792 1.1574402301149125 0.9956879572709049 0.09770178109811734 0.11891075773988195 114.58149023347887 713486.1741003104 0.02363690167948059 0.02632334700727544 1.7481369723766267e-09 8.757424541943719 -0.16175227284400762 DLELALS(ph)PIHNSSALPTTGR ddPTM_A549_PD325901_60min_R1 2 DLELALSPIHNSSALPTTGR 20 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR 80.786 8.4136e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DLELPSQEAPSFQGTES(ph)PKPCK ddPTM_A549_MK2206_60min_R1 2 DLELPSQEAPSFQGTESPKPCK 22 1 Q6PJF5-2;Q6PJF5;K7EPV3 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 DLELPSQEAPSFQGT(0.181)ES(0.819)PKPCK;DLELPSQEAPS(0.001)FQGT(0.163)ES(0.836)PKPCK 136.71 1.0412999999999999e-22 57928000.0 3126.8 3580.4 4230.7 3020.3999999999996 4377.7 3577.2 3335.0 3213.0 4437.6 4293.9 4529.799999999999 True False 3654.5273970795865 3762.62706687513 4830.676876559127 3760.3981355909063 3733.7461291041213 3955.73692964682 3940.9263310607735 3668.452589399825 3432.4906853910447 3323.9050077569336 3404.9256438800003 1.0733060804567698 1.105054107022296 1.418731972970325 1.1043994873573322 1.096572001745513 1.1617689616091458 1.1574192047759335 1.0773958004027155 1.0080956368491012 0.9762048735869775 1.0 11.733407577942934 -8.484591694026543 1.9776563160765555 1.0026426088702405 1.1646719866483637 0.4025158021699635 0.0881900570450506 0.24015041582901453 1.8439370002335453 0.015556562168533584 0.018516593896794456 3.276485919738018e-09 8.484591694026543 0.1620293777781232 DLELPSQEAPSFQGTES(ph)PKPCK ddPTM_A549_PD325901_60min_R1 2 DLELPSQEAPSFQGTESPKPCK 22 1 Q6PJF5-2;Q6PJF5;K7EPV3 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 DLELPSQEAPSFQGT(0.005)ES(0.995)PKPCK;DLELPSQEAPSFQGT(0.082)ES(0.918)PKPCK 196.8 7.021799999999999e-61 108226000.0 8409.8 8192.3 10818.900000000001 9171.6 8461.5 9324.5 9227.8 10496.599999999999 8244.0 9075.1 9892.599999999999 True False 9263.55670503245 8882.69387187935 11553.135613330782 9738.108901785114 7867.193430590307 9248.564363528123 9578.968978645918 10287.237078576602 7897.533349282247 8502.09663723375 8675.872914358195 1.067737713135662 1.0238386338254073 1.3316395626555158 1.1224356324617162 0.9067898421576048 1.0660096632146545 1.1040928184636198 1.1857293416033872 0.9102868872378445 0.9799701679773509 1.0 13.082793204988084 -8.771272702881571 24.997492770579584 0.9576354710416068 1.0993208622506268 0.26995723909975355 0.10063610460298116 193.97480820081103 493105.63033379975 0.018163561034828957 0.019451146373814284 1.6932742231183351e-09 8.771272702881571 0.1416853912090199 DLEPGEVPS(ph)DSDEDGEHK ddPTM_A549_MK2206_60min_R1 1 DLEPGEVPSDSDEDGEHK 18 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 DLEPGEVPS(0.816)DS(0.184)DEDGEHK 103.27 1.9959e-09 8409400.0 974.02 948.48 894.6 914.09 1218.1 930.45 766.87 869.78 1656.2 1045.9 1032.3 True False 1138.4107634973327 996.7535807143678 1021.4677319993835 1138.04209103506 1038.9191036073132 1028.9096014172765 906.2003524739356 993.073978589535 1281.0733444079344 809.6304635909031 775.9514199693858 1.4671160258231724 1.2845566810789437 1.3164068080959042 1.466640902699759 1.3388970969964877 1.3259974464095585 1.1678570708842682 1.2798146288961176 1.6509710678259697 1.0434035466071394 1.0 9.59982252213152 -11.101809437601574 1.4525289457402026 1.000838945322721 1.394005530972121 0.5280372443778709 0.1234381975345135 0.2832918942413453 1.0722512648948839 0.1066059033668215 0.023443090946959576 7.91025642948433e-12 11.101809437601574 0.3931665856494 DLEPGEVPS(ph)DSDEDGEHK ddPTM_A549_PD325901_60min_R1 2 DLEPGEVPSDSDEDGEHK 18 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 DLEPGEVPS(0.998)DS(0.002)DEDGEHK;DLEPGEVPS(0.998)DS(0.002)DEDGEHK 123.6 5.0738e-11 19229800.0 2187.25 2288.0 1976.31 2496.4 2307.34 2242.3 2202.9 2475.1000000000004 1969.67 1749.87 2642.1 True False 2409.2980098316534 2480.8177897366977 2110.4342811174647 2650.596958264243 2145.280398290876 2224.039452232195 2286.7325649731347 2425.7321888216115 1886.8916196119333 1639.382909565317 2317.1384496518413 1.0397730054471537 1.070638567198887 0.9107933457470205 1.1439096177712234 0.9258317726388824 0.95982156463994 0.9868778299875541 1.046865451300973 0.8143197571536762 0.7075032179504166 1.0 11.17812853286082 -7.592096591630844 0.8458033612317024 0.9203255323402996 1.029444432871688 0.2361250348785957 0.10228759656946952 0.729550395107732 1.0479038188586964 0.017425272482461417 0.034732249470247875 2.5580168939463312e-08 7.592096591630844 0.10911890053138851 DLES(ph)AEER ddPTM_A549_MK2206_60min_R1 2 DLESAEER 8 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 1 DLES(1)AEER;DLES(1)AEER 68.735 0.0073985 3555800.0 474.32 525.14 540.73 495.97 511.87 426.37 592.3299999999999 662.45 857.94 670.8900000000001 524.88 True False 554.373619989379 551.8673829457064 617.4136448960728 617.4826722649393 436.5746010700889 471.48819039849974 699.9486937562906 756.3543161680399 663.6179598486555 519.335483046659 394.5378100489504 1.4051216534116153 1.398769316627058 1.5649036142302055 1.5650785717808087 1.106546926429999 1.1950393052062667 1.7740978834688816 1.9170642126142454 1.6820135939983045 1.3163135948420885 1.0 8.62401975555527 -10.855460815470924 1.1575327277049798 1.0060586681372443 1.5210970503050283 0.2082535325366639 0.2416627690615273 0.40863503112429894 0.9899856470115129 0.16352972057253845 0.0418235494219339 1.3948875066816845e-11 10.855460815470924 0.515038382167784 DLES(ph)AEER ddPTM_A549_PD325901_60min_R1 2 DLESAEER 8 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 1 DLES(1)AEER;DLES(1)AEER 91.584 0.0026065999999999997 3776700.0 514.4200000000001 555.24 492.33 609.47 694.38 504.73 687.6600000000001 697.73 424.06 470.92 708.48 True False 566.6435397040112 602.0320234149494 525.7424744207951 647.1155776932014 645.6091442809545 500.61964622269807 713.829277601991 683.8132277914037 406.23823290837373 441.18603083228976 621.3414514247521 0.911968030468083 0.9689230004444004 0.8461409957685166 1.041481420898845 1.03905693528181 0.8057077876822224 1.148851852657121 1.1005433907932622 0.6538083560606796 0.7100540770628432 1.0 9.279242493483103 -8.745106860757792 24.99927647938193 0.8365205811853488 0.9812727162887978 0.29691066206519934 0.1277123253860935 330.20195766716074 505421.4762387684 0.02578895645011057 0.02920051385787293 1.7984283466191779e-09 8.745106860757792 0.14475213510344898 DLESAQS(ph)LNR ddPTM_A549_MK2206_60min_R1 3 DLESAQSLNR 10 0 P78504-2;P78504 P78504-2 JAG1 Protein jagged-1 1 DLESAQS(1)LNR;DLESAQS(1)LNR;DLESAQS(1)LNR 213.58 2.1452000000000002e-26 59061000.0 10701.5 10397.8 9965.8 9914.0 15071.9 13016.400000000001 9881.5 11735.099999999999 16840.8 15543.9 15449.1 True False 12507.651573444797 10927.003607405388 11379.100294611508 12342.930445056378 12854.843475625206 14393.786808412953 11676.84064179222 13398.586362236496 13026.385689231443 12032.522194292611 11612.662096531092 1.0770701385671984 0.940955959673491 0.9798873161056366 1.0628855246501514 1.1069678398259066 1.2394907118422598 1.0055266005957668 1.1537911161850556 1.1217398371664198 1.0361553702563118 1.0 13.50341111430415 -6.349067778664222 4.847042609913535 1.0790932286668875 0.9936892448999826 0.23107894997534473 0.07225087786959548 0.2869200643803266 11.50561107738696 0.011099546861170805 0.026596873466887033 4.4764343674043266e-07 6.349067778664222 -0.08540398376690495 DLESAQS(ph)LNR ddPTM_A549_PD325901_60min_R1 2 DLESAQSLNR 10 0 P78504-2;P78504 P78504-2 JAG1 Protein jagged-1 1 DLESAQS(1)LNR;DLESAQS(1)LNR 202.65 1.3636e-19 39531000.0 5593.2 4993.2 6452.3 5180.299999999999 5552.9 5661.3 6258.1 5777.1 5671.5 5946.4 6211.1 True False 6161.017546503781 5413.994487636925 6890.191878831873 5500.275365685095 5162.883460465038 5615.196249798034 6496.255420063723 5661.871208452722 5433.146578172525 5570.943289181025 5447.174075406891 1.1310484044047313 0.9939088438682793 1.2649112702199061 1.009748410743462 0.947809522698131 1.0308457508545095 1.1925918522400936 1.0394144064562127 0.9974248120144172 1.0227217291132538 1.0 12.411292256799763 -7.137752504944181 0.2396596471427439 0.98217673903634 1.1394436549565496 0.09157679298943566 0.08819935597307109 5.9111811946040635 0.623670429470077 0.08445161803508991 0.2862529513671062 7.281946687462488e-08 7.137752504944181 0.1572669159202097 DLESCS(ph)DDDNQGS(ph)KSPK ddPTM_A549_MK2206_60min_R1 2 DLESCSDDDNQGSKSPK 17 1 A0A0A0MRK1;Q5T3I0;F8W895;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 2 DLES(0.48)CS(0.52)DDDNQGS(0.579)KS(0.421)PK;DLES(0.104)CS(0.896)DDDNQGS(0.622)KS(0.378)PK 72.64399999999999 0.00021269999999999997 10120000.0 3125.7 3598.7 3111.7 2862.0 3874.2 3146.3999999999996 3152.7 3383.9 4270.2 4377.4 4349.200000000001 True False 3653.241743972003 3781.8584587095083 3552.9858502822294 3563.19012848006 3304.310312121706 3479.349959588713 3725.5047807901974 3863.578187759121 3303.006518108174 3388.5422997636674 3269.173608186431 1.1174817191793718 1.1568239903929387 1.0868146743216989 1.0899360375225635 1.0107478855963135 1.0642903609878573 1.139586093397137 1.1818210504588147 1.0103490710426088 1.0365134146679522 1.0 11.674710277557757 -8.877875493988931 10.05066666361767 1.0045748259706466 1.1029832817673528 0.43986499925087674 0.044869125555338646 0.1911320600141685 16.04511711959581 0.008103927919706507 0.008619342991495834 1.3247212593830996e-09 8.877875493988931 0.0984084557967062 DLESCS(ph)DDDNQGSK ddPTM_A549_MK2206_60min_R1 2 DLESCSDDDNQGSK 14 0 A0A0A0MRK1;Q5T3I0;F8W895;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 DLES(0.027)CS(0.973)DDDNQGSK;DLESCS(1)DDDNQGSK 190.41 1.8674e-26 21430000.0 4395.6 5438.200000000001 5315.700000000001 4530.5 7883.8 5632.9 5352.299999999999 5804.0 7725.7 7964.0 7166.0 True False 5137.469817897863 5714.981151569748 6069.546191581853 5640.472703381874 6724.103463606713 6228.969739183596 6324.743628706623 6626.734774004535 5975.8412854077815 6164.926868761782 5386.484428461319 0.9537704761109672 1.0609853657745125 1.1268103105452874 1.0471528839067132 1.2483287667328304 1.1564072674694315 1.1741876752279636 1.2302522845865724 1.1094140092250886 1.1445177184932158 1.0 12.395128267771481 -4.090682221061636 12.681306451026838 1.0883420854531043 1.10134429190945 0.0 0.09104189429803072 0.0 0.0 0.013081051124715547 0.0 8.115546657888003e-05 4.090682221061636 0.013002206456345755 DLESCS(ph)DDDNQGSK ddPTM_A549_PD325901_60min_R1 1 DLESCSDDDNQGSK 14 0 A0A0A0MRK1;Q5T3I0;F8W895;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 DLES(0.003)CS(0.997)DDDNQGSK 165.34 1.0994e-19 15926000.0 2407.1 2079.7 2129.9 2306.0 1827.1 1909.5 2099.7 1979.3 2357.3 1860.1 2391.9 True False 2651.4670199866378 2254.963617707786 2274.4478221291633 2448.436382694017 1698.770799152816 1893.9496650927063 2179.6052324999264 1939.8213087691884 2258.2308787315687 1742.6529685533483 2097.7114635033636 1.2639808029453456 1.0749636720494427 1.0842519868440983 1.1671940709161746 0.8098210019388075 0.9028647161653218 1.0390395773781933 0.9247321867276805 1.0765212080026123 0.8307400702492057 1.0 11.034600536075784 -4.500608969052082 0.8684025817932982 1.0117902952137312 1.9206587615857547 0.36799643924813263 0.10582009093755831 5.786909687384762 1.2472904491356338 0.014361417110270926 6.8914662449947715 3.1578466120928424e-05 4.500608969052082 0.9088684663720235 DLESCS(ph)DDDNQGSKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 DLESCSDDDNQGSKSPK 17 1 A0A0A0MRK1;Q5T3I0;F8W895;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 2 DLES(0.113)CS(0.887)DDDNQGS(0.333)KS(0.667)PK 115.87 4.348e-10 11111000.0 5887.0 6097.1 7017.2 6593.2 6165.2 5990.7 6177.6 6346.4 4540.3 5918.8 6994.0 True False 6484.643906219651 6610.9240147743085 7493.429389851529 7000.446989756371 5732.1776207853645 5941.9137254102525 6412.691948512429 6219.816073345514 4349.4869803185575 5545.085957891274 6133.782338618892 1.057201502797336 1.0777891437639198 1.2216653568993092 1.1412936754669096 0.9345257631160165 0.9687193639068971 1.0454710640997962 1.014026212535281 0.709103574304188 0.9040239206042366 1.0 12.58256125717399 -7.506031890321221 0.8572663704464724 0.8727845935446703 1.1198044203134374 0.40172095232426497 0.09874893792979371 0.4566781259974285 0.6710562725265157 0.024172102206274717 0.05068132664487623 3.118660571884126e-08 7.506031890321221 0.2470198267687671 DLESCSDDDNQGSKS(ph)PK ddPTM_A549_MK2206_60min_R1 1 DLESCSDDDNQGSKSPK 17 1 A0A0A0MRK1;Q5T3I0;F8W895;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 DLESCSDDDNQGS(0.017)KS(0.983)PK 132.45 1.0455e-12 17406000.0 3475.2 3118.7 2836.2 2820.1 4223.8 3491.0 3164.8 3047.5 4901.6 4171.3 4180.6 True False 4061.728799517394 3277.4285089552745 3238.415807619779 3511.024626599099 3602.4846152340283 3860.415302861746 3739.8031941652594 3479.49245757733 3791.3954262467855 3229.0004329063336 3142.441641309713 1.292539134577067 1.0429560459838172 1.0305412724450997 1.1172919109917878 1.1463966642615446 1.2284763707665212 1.1900947164786733 1.107257621537608 1.2065125972129749 1.027545075287554 1.0 11.617670237080391 -10.926048137123399 1.149506772647381 0.9989678963695242 1.150738327741212 0.3374681794236295 0.07413384572293484 0.4502227380664294 1.0450243913770678 0.05484724810751667 0.012568550273591043 1.185637325052874e-11 10.926048137123399 0.15177043137168778 DLESCSDDDNQGSKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 DLESCSDDDNQGSKSPK 17 1 A0A0A0MRK1;Q5T3I0;F8W895;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 DLESCSDDDNQGS(0.049)KS(0.951)PK 180.63 5.7091e-32 23532000.0 7612.4 8520.2 9275.2 8942.8 9079.0 8446.9 9691.2 8863.9 6760.9 7849.6 9634.6 True False 8385.20524404731 9238.227155644501 9904.670848308577 9495.176445427609 8441.322360849656 8378.111246960769 10060.003919228124 8687.102560904967 6476.76288466307 7353.974916378882 8449.605278761448 0.9923783380892347 1.0933323925633898 1.1722051529678572 1.123742013049327 0.9990197272371276 0.9915387725885393 1.190588623650208 1.0281075002095639 0.7665166207163278 0.8703335450312106 1.0 13.044668232485982 -8.567422923023342 9.354493416417275 0.8899814647871815 1.081672566507001 0.5389442362940753 0.08125832155099462 0.24100368809202133 48.09485216979415 0.017324270164060348 0.019657317417218313 2.707553687886555e-09 8.567422923023342 0.1916911017198195 DLFAFQES(ph)PPR ddPTM_A549_MK2206_60min_R1 3 DLFAFQESPPR 11 0 E7EX48;P51957-3;P51957;P51957-2 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 DLFAFQES(1)PPR;DLFAFQES(1)PPR;DLFAFQES(1)PPR 117.2 1.7847e-05 7917400.0 1665.65 2560.83 2449.6 1887.52 3126.82 3022.2 2361.11 3003.17 4202.0 3610.71 3996.5200000000004 True False 1946.7709987673063 2691.1653088107014 2796.9901143591437 2349.962484733992 2666.868920073407 3342.0071980260022 2790.0931242971255 3428.8785443223996 3250.253709215154 2795.048103252996 3004.073785659258 0.6480436692536425 0.8958386180984275 0.9310657173972613 0.7822585769870768 0.8877508045256451 1.112491715077026 0.9287698383496351 1.1414095621389393 1.0819486940470973 0.9304192582072712 1.0 11.552704533232442 -7.099380075378797 4.717907502051851 1.0433055474228887 0.8288636337369728 0.5515770589403404 0.09234100440629484 0.11919181361409706 4.342607059940885 0.012257871867305198 0.021717534052052973 7.954628916627674e-08 7.099380075378797 -0.21444191368591592 DLFAFQES(ph)PPR ddPTM_A549_PD325901_60min_R1 2 DLFAFQESPPR 11 0 E7EX48;P51957-3;P51957;P51957-2 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 DLFAFQES(1)PPR;DLFAFQES(1)PPR 100.04 0.00027164 18120500.0 1228.6100000000001 1303.9299999999998 1255.2600000000002 1240.17 1638.15 1492.44 1263.63 1682.28 1464.17 1440.96 1590.4 True False 1353.337582745122 1413.8167572427324 1340.4494920915793 1316.7724842695757 1523.0919953107023 1480.2860634569058 1311.7181311348675 1648.725605676871 1402.6360266883294 1349.977539684228 1394.7908823762489 0.9702799178321954 1.0136406647812823 0.961039758023016 0.9440644478735362 1.0919859131254657 1.0612960567501002 0.94044071244583 1.1820593513401836 1.0056246025201392 0.9678709236931101 1.0 10.445833123151198 -6.716979311179671 24.999974807428597 1.0213922295368403 0.9744110887747878 0.16279480606450358 0.06408049580751253 235.60813218538686 132481.5345587825 0.008714828214142479 0.018141304347941936 1.9187601439461924e-07 6.716979311179671 -0.04698114076205251 DLFDLNS(ph)S(ph)EEDDTEGFSER ddPTM_A549_PD325901_60min_R1 3 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 DLFDLNS(1)S(0.999)EEDDT(0.001)EGFSER;DLFDLNS(1)S(0.999)EEDDT(0.001)EGFSER;DLFDLNS(1)S(0.999)EEDDT(0.001)EGFSER 151.7 3.3160999999999996e-21 19290200.0 5146.7 5126.6 4854.4 4658.4 5699.3 5012.9 5592.5 5900.7 4891.9 5524.5 6859.2 True False 5669.189195199712 5558.636573804264 5183.848775878594 4946.138788005993 5299.0008295176185 4972.076604421701 5805.325647833426 5783.005909490398 4686.310455040494 5175.682127182932 6015.56188405129 0.9424205592880865 0.9240427878468934 0.8617397469756286 0.8222239058199041 0.8808821073832773 0.8265356919698356 0.9650512719725732 0.9613409388776377 0.7790312102789662 0.8603821599616351 1.0 12.554483783405885 -7.745121725742339 24.977605932815653 0.9037063609889204 0.8755647037134635 0.06597414248271716 0.06471378623494374 984.5833908391584 1507108.8388254354 0.013511898611809877 0.020007676822829792 1.798366791261734e-08 7.745121725742339 -0.02814165727545692 DLFDLNS(ph)SEEDDT(ph)EGFSER ddPTM_A549_PD325901_60min_R1 1 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 DLFDLNS(0.956)S(0.078)EEDDT(0.965)EGFSER 154.56 3.3219e-26 5337700.0 4595.8 3439.6 3803.7 4473.9 4376.6 3488.5 4666.5 4087.9 4333.0 4752.0 4311.5 True False 5062.362232750855 3729.467163277248 4061.8419555062237 4750.242642035894 4069.2027144503386 3460.090812608488 4844.086211106781 4006.363627604489 4150.899078413392 4451.957909018608 3781.2128328503527 1.3388197005918723 0.9863150603098695 1.0742166958225219 1.256274865240809 1.0761633619504283 0.9150743334381956 1.2810932431579667 1.0595445971192299 1.0977692242952541 1.1773888711952336 1.0 11.884633341143026 -14.999999999979291 0.1089223156276619 0.6223578830211474 1.185266972027015 0.0 0.1295846487519829 143.53570051874448 1.1091380524320238 12.146410887213312 0.5898853773803211 1.0000000000476838e-15 14.999999999979291 0.5629090890058677 DLFDLNS(ph)SEEDDTEGFSER ddPTM_A549_MK2206_60min_R1 3 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 DLFDLNS(0.5)S(0.5)EEDDTEGFSER;DLFDLNS(0.5)S(0.5)EEDDTEGFSER;DLFDLNS(0.5)S(0.5)EEDDTEGFSER 310.13 1.1837999999999997e-162 13168600.0 2893.5 3409.0 3326.8 3246.2 4078.8999999999996 4311.9 4102.1 3495.4 5084.700000000001 4665.9 4617.3 True False 3381.8520607169576 3582.5035389837244 3798.590264716689 4041.519145727453 3478.8992132861586 4768.18239599243 4847.398471557542 3990.883654213549 3933.023568597404 3611.8699493917147 3470.6969790028534 0.9744014188437098 1.0322144401131192 1.0944747662205996 1.1644690303353995 1.0023632815924084 1.3738400168148215 1.3966642725894844 1.1498796000796785 1.1332085723390866 1.0406756830812183 1.0 11.761009695932511 -4.090548694019699 15.673967604077871 1.1055337976294393 0.32999373810707555 0.0 0.13870597735065557 0.0 0.0 0.01951593666076864 0.0 8.118042226191266e-05 4.090548694019699 -0.7755400595223637 DLFDLNS(ph)SEEDDTEGFSER ddPTM_A549_PD325901_60min_R1 2 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 DLFDLNS(0.972)S(0.028)EEDDTEGFSER;DLFDLNS(0.97)S(0.03)EEDDTEGFSER 229.6 5.178599999999999e-75 65270000.0 2840.1 3325.5 2963.2 2758.1 3216.3 3007.5 3063.6000000000004 3766.6000000000004 3144.7 2635.5 3559.7 True False 3128.424861228886 3605.751555843264 3164.3005711691344 2928.4615729004217 2990.3981836326407 2983.007917133448 3180.1869744662476 3691.4722081594628 3012.5391949888285 2469.094080222755 3121.8794667974944 1.00209661984103 1.1549938407910856 1.0135883222984123 0.9380444069176426 0.9578839335204281 0.9555166843752284 1.0186770528102953 1.1824518683119665 0.9649761392226875 0.7908998750536697 1.0 11.608199121782393 -5.978961157137448 24.159682953765014 0.9929905939776176 1.079981799143833 0.13386307080854687 0.09321467466028291 194.71147532683872 223590.0589481806 0.009563450443383432 0.029729022628433344 1.0496363028716414e-06 5.978961157137448 0.08699120516621539 DLFDLNSS(ph)EEDDTEGFSER ddPTM_A549_MK2206_60min_R1 1 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 DLFDLNS(0.314)S(0.666)EEDDT(0.017)EGFS(0.004)ER 43.382 0.056014 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DLFDYS(ph)PPLHK ddPTM_A549_MK2206_60min_R1 4 DLFDYSPPLHK 11 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 DLFDY(0.205)S(0.795)PPLHK;DLFDY(0.005)S(0.995)PPLHK;DLFDYS(1)PPLHK;DLFDY(0.103)S(0.897)PPLHK 113.76 7.3783e-06 102113700.0 8049.799999999999 8644.5 9001.8 8068.2 11703.099999999999 9831.82 8611.9 8370.7 12055.8 11458.8 11591.1 True False 9408.409441285423 9084.468126355172 10278.390599052147 10044.909362195262 9981.58949300283 10872.216666566084 10176.570755760804 9557.27235919362 9325.180549156603 8870.249121517767 8712.709971914315 1.079848803829545 1.042668487260477 1.1797007627001073 1.1529029882293031 1.1456354595962435 1.2478570618800584 1.1680144052269945 1.0969345232426853 1.070296220029888 1.018081532624325 1.0 13.088905804284675 -9.064872485433977 1.100969651997419 1.0198122773820273 1.14499805540004 0.4963181746541998 0.0515661239908573 0.27385632292658557 0.6841031224284361 0.013152265257117195 0.012105315346804289 8.612465883789203e-10 9.064872485433977 0.12518577801801278 DLFDYS(ph)PPLHK ddPTM_A549_PD325901_60min_R1 3 DLFDYSPPLHK 11 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 DLFDYS(1)PPLHK;DLFDY(0.09)S(0.91)PPLHK;DLFDYS(1)PPLHK 126.1 5.974100000000001e-07 151701800.0 13303.699999999999 13516.7 12703.400000000001 13657.400000000001 15787.7 13192.0 12796.099999999999 14579.2 14145.7 14913.900000000001 15620.9 True False 14654.28183033369 14655.79974586278 13565.52911574986 14500.986579794144 14678.826416608243 13084.568725793666 13283.062587794593 14288.406418838855 13551.205421996845 13972.233808777903 13699.62832904374 1.0696846278132996 1.069795427573164 0.9902114707002974 1.0584948898979611 1.0714762520592302 0.9551039204511758 0.96959291659278 1.0429776688574013 0.9891659172437377 1.0198987500380743 1.0 13.741849132945541 -7.2501132829268355 24.883971385230637 0.9941787624085605 1.0498605443415605 0.4549651496275178 0.030336555025025233 481.5830782785986 1058060.5583579494 0.004245276102664829 0.0073110083398706185 5.621946611956914e-08 7.2501132829268355 0.055681781932999996 DLFGS(ph)PK ddPTM_A549_PD325901_60min_R1 1 DLFGSPK 7 0 A0A2R8YFA9;Q6ZW33 A0A2R8YFA9 MICALCL MICAL C-terminal-like protein 1 DLFGS(1)PK 48.283 0.057425 3776500.0 3042.2 2801.7 3008.4 3724.5 3746.8 3219.5 2711.2 3563.1 2990.6 3280.2 2445.1 True False 3351.041904450728 3037.809091567004 3212.5681149788156 3954.553906046777 3483.63769375829 3193.281459421825 2814.376199625567 3492.0311753021224 2864.9154820916438 3073.0876121975666 2144.3682007659495 1.5627175889167566 1.4166452806388032 1.4981420232921354 1.8441580623300815 1.6245520207369075 1.489147926312847 1.3124500720633223 1.6284662186534942 1.336018451060933 1.433096989173728 1.0 11.06633693104138 -9.654776375979656 0.4821729739758433 0.9827330859698007 1.5800791591259251 0.2406505519214337 0.1794670377305458 0.38056846554014445 0.1922367731158779 0.0944437256411684 0.041848133027461244 2.2142345550203515e-10 9.654776375979656 0.5973460731561244 DLFNGLDS(ph)EEEKDGEEK ddPTM_A549_MK2206_60min_R1 1 DLFNGLDSEEEKDGEEK 17 1 Q96S90-2;Q96S90 Q96S90-2 LYSMD1 LysM and putative peptidoglycan-binding domain-containing protein 1 1 DLFNGLDS(1)EEEKDGEEK 166.34 1.1255999999999999e-23 26479000.0 2467.6 2639.9 2725.5 2554.6 3533.5 3324.7 3223.7 3121.5 3824.2 3584.0 3589.3 True False 2884.070552972235 2774.259634075428 3112.016883036353 3180.477114680351 3013.7268307991467 3676.517547242752 3809.404561751312 3563.982184192825 2958.0248059925257 2774.3719108038963 2697.977750359506 1.0689749211563855 1.0282737260178507 1.1534627676679974 1.1788374141545652 1.1170317584707905 1.362693797883565 1.4119481012190365 1.3209827930263414 1.0963859155615232 1.028315341160323 1.0 11.397662735402545 -9.035030915760826 3.4697284583354446 1.0384216252676044 1.2061581129933046 0.2908700848622151 0.11505515002673872 0.22877013463589066 5.746150068038111 0.024104078723506304 0.024148661464809523 9.225057551657934e-10 9.035030915760826 0.16773648772570016 DLFNGLDS(ph)EEEKDGEEK ddPTM_A549_PD325901_60min_R1 4 DLFNGLDSEEEKDGEEK 17 1 Q96S90-2;Q96S90 Q96S90-2 LYSMD1 LysM and putative peptidoglycan-binding domain-containing protein 1 1 DLFNGLDS(1)EEEKDGEEK;DLFNGLDS(1)EEEKDGEEK;DLFNGLDS(1)EEEKDGEEK;DLFNGLDS(1)EEEKDGEEK 266.74 1.8824999999999993e-100 93401500.0 38023.1 39392.8 41372.7 39393.7 47228.2 39440.8 40458.8 40964.6 42555.2 43431.4 45673.5 True False 41883.17712087322 42712.56950504361 44180.500216255794 41826.95937941601 43911.054160444975 39119.607201355575 41998.481773904874 40147.52891689299 40766.75293369431 40689.133991950905 40055.94904817127 1.0456168962693786 1.0663227440617495 1.102969752710748 1.0442134158178333 1.0962430101865157 0.9766241502432098 1.0484954862359526 1.0022862988119838 1.017745276355036 1.0158075132115374 1.0 15.289728904953003 -7.257108336710354 24.99972455012181 1.009425303396961 1.0710890763110417 0.6318148144039961 0.023149910893107344 171.53093957558164 990112.0203650469 0.003131197380701519 0.005309523226957453 5.53212090759457e-08 7.257108336710354 0.06166377291408076 DLFSLDSEDPSPAS(ph)PPLR ddPTM_A549_MK2206_60min_R1 3 DLFSLDSEDPSPASPPLR 18 0 H3BTX0;Q9BTK6 H3BTX0 PAGR1 PAXIP1-associated glutamate-rich protein 1 1 DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPS(0.001)PAS(0.999)PPLR;DLFSLDSEDPSPAS(1)PPLR 352.27 3.470399999999998e-220 78974600.0 8190.360000000001 9738.210000000001 10234.2 9338.17 12477.93 9844.14 10066.189999999999 9795.57 14895.89 14291.810000000001 15890.68 True False 9572.692532923367 10233.843293742064 11685.563450512072 11626.022069206376 10642.443026413923 10885.840360788721 11895.08642412614 11184.122045174983 11521.994698848392 11063.280194906874 11944.58559554309 0.8014252530029378 0.8567767556172597 0.9783146813291147 0.9733298804057646 0.8909847010837245 0.9113619115300725 0.9958559322949287 0.9363340365151002 0.9646207151085776 0.9262171639537616 1.0 13.544069181470457 -3.393478266846982 0.4347978836075897 0.9783728997172777 5.38842250712176e-53 0.5301144873685856 0.04053365013643641 10.07709949850926 0.35609841499631256 0.008256154715790743 7.304489873400672 0.0004041305976863059 3.393478266846982 -0.9783728997172777 DLFSLDSEDPSPAS(ph)PPLR ddPTM_A549_PD325901_60min_R1 5 DLFSLDSEDPSPASPPLR 18 0 H3BTX0;Q9BTK6 H3BTX0 PAGR1 PAXIP1-associated glutamate-rich protein 1 1 DLFSLDSEDPS(0.004)PAS(0.996)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPS(0.016)PAS(0.984)PPLR 382.49 8.711299999999995e-276 134905500.0 18776.06 18389.1 18800.74 18432.0 21378.559999999998 21489.21 20817.18 20723.97 20778.48 21645.2 22058.58 True False 20682.191788995173 19938.813993552052 20076.671274433847 19570.50277789078 19877.003697628166 21314.20899848486 21609.389176497993 20310.614160710047 19905.232744710607 20278.518378007062 19345.514500859597 1.0690949464319588 1.0306685817358898 1.0377946408994065 1.011629997073543 1.0274735105517587 1.1017649077018752 1.1170232342767519 1.0498875157756888 1.0289327142902371 1.048228434405609 1.0 14.239711477830095 -9.194529420277505 1.5627090807538029 1.0090448464148412 1.0548308326806801 0.10334431357346752 0.03244862121308521 0.3447395346406342 1.739102100881987 0.0072506228639126835 0.0065938261556963895 6.389554513195326e-10 9.194529420277505 0.04578598626583896 DLGEGEEGELAPPEDLLGRPQALS(ph)R ddPTM_A549_MK2206_60min_R1 2 DLGEGEEGELAPPEDLLGRPQALSR 25 1 Q8NC44;H7C3D5 Q8NC44 FAM134A Protein FAM134A 1 DLGEGEEGELAPPEDLLGRPQALS(1)R;DLGEGEEGELAPPEDLLGRPQALS(1)R 103.95 2.1903e-12 6587800.0 1686.83 2221.9 1749.85 1565.53 2732.6000000000004 2105.7 1836.75 2270.19 3079.1000000000004 2881.8 2760.0 True False 1971.5256649660228 2334.9852194977802 1998.005042297252 1949.0849202793133 2330.6381598533317 2328.5237763494647 2170.463699722903 2591.9963846652918 2381.6887663123243 2230.7993785029776 2074.615827875139 0.9503087937901721 1.1255024608046669 0.9630723025687347 0.9394919744132113 1.1234071043603362 1.1223879356663267 1.0462002991396886 1.2493861995259448 1.1480143621345524 1.0752831191825065 1.0 11.018628491226277 -6.773358643383207 24.975459947236885 1.0905072620056848 1.0016929463680317 0.3236410701753789 0.07649388997212832 284.24444150926143 595602.6085143134 0.012746294957453929 0.02422555442572636 1.6851608331699735e-07 6.773358643383207 -0.08881431563765307 DLGEGEEGELAPPEDLLGRPQALS(ph)R ddPTM_A549_PD325901_60min_R1 2 DLGEGEEGELAPPEDLLGRPQALSR 25 1 Q8NC44;H7C3D5 Q8NC44 FAM134A Protein FAM134A 1 DLGEGEEGELAPPEDLLGRPQALS(1)R;DLGEGEEGELAPPEDLLGRPQALS(1)R 116.35 2.2768e-17 11722200.0 2812.3999999999996 2561.5 2343.8 3025.1000000000004 3323.8 2990.7 3052.0 3050.3999999999996 3602.0 2756.5 3064.9 True False 3097.9127776205482 2777.3665945850335 2502.8643624143547 3211.953556499425 3090.347754487508 2966.344730763423 3168.1455301184824 2989.5573790074936 3450.6204662924165 2582.454119572767 2687.9367300018666 1.152524441160636 1.0332708220342317 0.931147052115552 1.1949513248019028 1.149710006189529 1.1035768430313324 1.1786533123182115 1.1122127041306578 1.2837431877684191 0.96075703373084 1.0 11.392283464301519 -6.28159643962983 24.679275180540785 1.1405150491253775 1.0384097468317715 0.11065846757149989 0.09713787370228272 967.9267282333079 1185078.769727376 0.015311772497293782 0.03562961251070705 5.228818419101152e-07 6.28159643962983 -0.10210530229360604 DLGHPVEEEDELES(ph)GDQEDEDDES(ph)EDPGKDLDHI ddPTM_A549_PD325901_60min_R1 1 DLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 34 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 2 DLGHPVEEEDELES(1)GDQEDEDDES(1)EDPGKDLDHI 49.968 0.020406999999999998 3921000.0 344.6 375.69 269.37 332.62 285.96 233.17 318.41 337.33 236.84 340.97 370.78 True False 379.5835383188881 407.35071478416984 287.6510680533982 353.16518196517114 265.8751561084447 231.27114082726717 330.5272667906376 330.60168851973447 226.8864384332858 319.4410960096957 325.1764105680746 1.1673157276561534 1.2527068432563695 0.8846000469433789 1.0860725762616081 0.8176335904685331 0.7112174601572193 1.0164552410588925 1.0166841067658692 0.6977333873540249 0.9823624519738088 1.0 8.345078792849291 -5.8851959646446055 1.188041033900196 0.8691348345025872 1.248602798688166 0.3723766965613159 0.13282290879116776 0.5116521702820392 1.08918929600682 0.021893920399798285 0.18112657731373366 1.3025788893167814e-06 5.8851959646446055 0.3794679641855788 DLGHPVEEEDELES(ph)GDQEDEDDESEDPGKDLDHI ddPTM_A549_MK2206_60min_R1 2 DLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 34 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 DLGHPVEEEDELES(0.967)GDQEDEDDES(0.033)EDPGKDLDHI;DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI 140.39 1.6762e-31 47247000.0 1404.1 1652.76 1556.91 1302.06 1769.75 1182.6799999999998 1237.52 1704.1 2219.87 2825.7 2425.58 True False 1641.0777530508662 1736.878424491269 1777.703249080215 1621.0647584516948 1509.422119373648 1307.8304126005526 1462.361365281659 1945.661393587375 1717.0729894039612 2187.3724074661186 1823.2415433976016 0.9000879554294962 0.9526321023020377 0.9750234441057513 0.8891113546210935 0.82787830544978 0.7173105600497766 0.8020667204393312 1.0671440658167786 0.9417693424230583 1.1997161952496764 1.0 10.832289987222866 -8.254188953010068 24.998586047309157 0.9788320092982931 0.8674725818457061 0.38262097025411757 0.09869888801570487 540.1450809807991 1862356.4450895437 0.013079133524419655 0.016704592458823046 5.56943381070755e-09 8.254188953010068 -0.11135942745258698 DLGHPVEEEDELES(ph)GDQEDEDDESEDPGKDLDHI ddPTM_A549_PD325901_60min_R1 5 DLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 34 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 DLGHPVEEEDELES(0.841)GDQEDEDDES(0.159)EDPGKDLDHI;DLGHPVEEEDELES(0.998)GDQEDEDDES(0.002)EDPGKDLDHI;DLGHPVEEEDELES(0.5)GDQEDEDDES(0.5)EDPGKDLDHI;DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI 212.55 3.4183999999999997e-101 528168900.0 9090.38 8201.23 8448.09 9429.39 9791.25 9535.02 9729.810000000001 11722.630000000001 10375.900000000001 8487.43 10081.1 True False 10013.228685615944 8892.376434319185 9021.428189892096 10011.822004601534 9103.546377978766 9457.369958445812 10100.083243906334 11488.812948424675 9939.837006164204 7951.532221326131 8841.18860935815 1.1325658944790775 1.00578969946494 1.020386351711032 1.1324067890605003 1.0296744906383875 1.0696944015463543 1.142389749859615 1.2994647502784962 1.1242647844480056 0.8993736671231803 1.0 13.110024623232695 -7.536590981149032 24.60016000538607 1.088562572305449 1.0610210557055602 0.01826918269800215 0.09917220497688468 887.7467531690679 1592638.0529188295 0.014757610742368059 0.02189576637248224 2.906758953381232e-08 7.536590981149032 -0.027541516599888904 DLGHPVEEEDELESGDQEDEDDES(ph)EDPGKDLDHI ddPTM_A549_PD325901_60min_R1 1 DLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 34 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 DLGHPVEEEDELES(0.434)GDQEDEDDES(0.566)EDPGKDLDHI 68.934 0.00018505 3531200.0 317.93 276.55 170.25 412.92 277.69 310.67 0.0 174.49 362.25 204.01 182.35 True False 350.2060195523042 299.85583905230936 181.80418879641778 438.42513059063924 258.1860123784933 308.14000652231033 0.0 171.0096600652431 347.0258922583086 191.12877378343563 159.92210601188947 2.1898537249519965 1.8750118200045245 1.136829631188708 2.7414917269664043 1.6144485513422286 1.9268130854867653 0.0 1.0693309657423429 2.1699682483702962 1.1951366734079034 1.0 7.321225565925024 -11.135630737644977 1.502216489260747 1.0000391160708724 1.682905782768989 0.07826937538129619 0.6908802497807167 0.7644491884422829 3.090151629682524 0.515932008403879 0.1107549151003239 7.31761004693206e-12 11.135630737644977 0.6828666666981167 DLGLPTEAYISVEEVHDDGT(ph)PTSK ddPTM_A549_PD325901_60min_R1 1 DLGLPTEAYISVEEVHDDGTPTSK 24 0 H3BNT7;H3BTM8;P51665 H3BNT7 PSMD7 26S proteasome non-ATPase regulatory subunit 7 1 DLGLPTEAYISVEEVHDDGT(0.906)PT(0.039)S(0.055)K 129.24 1.5107e-22 2398800.0 833.39 1080.5 793.64 805.79 988.79 559.72 822.32 969.3 758.06 988.32 1047.9 True False 917.9951392907076 1171.5575270150805 847.501182945016 855.5618182181319 919.3408015403166 555.1618258945748 853.6138375907699 949.9665510988604 726.2013744246605 925.9173065322532 919.0149431854071 0.998890329365957 1.2747970375262159 0.9221843335947112 0.9309552848538679 1.000354573510829 0.604083567967157 0.9288356450789039 1.0336791127750018 0.7901953932409047 1.00751061057062 1.0 9.843944509704933 -5.865625952180989 7.737997180688083 0.899005994626685 1.1355507746151212 0.29837635812329244 0.13119544130733518 0.18227247110297837 11.976010954505083 0.017799450218820023 0.055930254568127794 1.362617768468759e-06 5.865625952180989 0.23654477998843626 DLGLSESGEDVNAAILDESGKK ddPTM_A549_MK2206_60min_R1 1 DLGLSESGEDVNAAILDESGKK 22 1 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 139.98 5.654100000000001e-23 1905000.0 1216.2 1321.0 1369.0 926.33 1496.6 1400.2 1288.0 1106.5 1709.9 1764.3 1936.1 False True 1421.4648267648051 1388.2332575528014 1563.1447854987227 1153.2808915845337 1276.4521225340313 1548.3682346224623 1522.0129278579552 1263.3497635141307 1322.6103801492125 1365.7434046404344 1455.3129363583541 0.9767416967526946 0.9539070414824959 1.074095300362132 0.7924624750951513 0.8770980389469442 1.063941779076713 1.0458320611555239 0.8680949175614593 0.9088151057454318 0.9384534216111274 1.0 10.507113694282783 DLGLSESGEDVNAAILDESGKK ddPTM_A549_PD325901_60min_R1 2 DLGLSESGEDVNAAILDESGKK 22 1 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 196.55 2.6030999999999995e-60 7573000.0 3608.1000000000004 4334.5 4123.6 3856.5 4627.299999999999 4641.7 4395.3 4672.6 4483.4 5315.3 5076.700000000001 False True 3974.391655857168 4699.783526929071 4403.452293221195 4094.7072462530277 4302.294411318387 4603.8995341507325 4562.565546700445 4579.401327416215 4294.978289443479 4979.69105088523 4452.298083852808 0.8926607295839271 1.0555860004014153 0.9890290834729232 0.9196839854688394 0.9663087085120285 1.034050157344078 1.0247664151795104 1.0285477839016155 0.9646654847796732 1.1184541010282134 1.0 12.120334469817262 -5.231755289640525 23.635840227285883 0.9903168931142596 0.8926604034146349 0.21459433309483344 0.053563036278016056 4643.507107956734 3697251.3425486167 0.005194780727751369 0.7237294460581203 5.864685267559048e-06 5.231755289640525 -0.0976564896996247 DLGNPNTAPPT(ph)PELHGINPVFLSSNPSR ddPTM_A549_MK2206_60min_R1 2 DLGNPNTAPPTPELHGINPVFLSSNPSR 28 0 J3KQH6;P78364 J3KQH6 PHC1 Polyhomeotic-like protein 1 1 DLGNPNT(0.008)APPT(0.992)PELHGINPVFLSSNPSR;DLGNPNTAPPT(1)PELHGINPVFLSSNPSR 115.74 2.4326e-20 7315500.0 982.76 1701.37 1308.95 1313.77 1787.3899999999999 1614.5700000000002 1242.77 1384.87 2030.7 2162.7 1800.1799999999998 True False 1148.6258618248476 1787.9624658611715 1494.5787925336401 1635.643708977377 1524.4672987412164 1785.4227257351745 1468.5652223245568 1581.1795634865018 1570.7496923615454 1674.144567939616 1353.1456235595172 0.848856059411647 1.321337803360622 1.1045217650721701 1.2087713846161912 1.1266099318497804 1.319460887763529 1.0852972486888903 1.168521359384166 1.1608134889647796 1.237224241642001 1.0 10.402101393068877 -10.599477175378599 0.7359175304930023 0.9921509298978477 1.1589217413953339 0.0 0.13944092913196288 0.9375747731389257 0.8428167630095634 0.09233206614221556 0.021160533333775672 2.5149121823241163e-11 10.599477175378599 0.16677081149748618 DLGNPNTAPPT(ph)PELHGINPVFLSSNPSR ddPTM_A549_PD325901_60min_R1 2 DLGNPNTAPPTPELHGINPVFLSSNPSR 28 0 J3KQH6;P78364 J3KQH6 PHC1 Polyhomeotic-like protein 1 1 DLGNPNTAPPT(1)PELHGINPVFLSSNPSR;DLGNPNTAPPT(1)PELHGINPVFLSSNPSR 143.06 1.8789e-35 10405600.0 4287.3 3602.3 3604.42 3682.2 5130.6 4587.4 3826.55 4544.530000000001 4716.299999999999 4514.799999999999 4632.6 True False 4722.543539856556 3905.8784632729507 3849.0376163382316 3909.6411311170477 4770.244355609125 4550.041735347623 3972.171454218506 4453.885784035186 4518.090312375048 4229.734757499412 4062.8195684709585 1.1623808195927057 0.9613713819791725 0.9473808894217807 0.9622975042892294 1.174121635286995 1.1199221768689154 0.9776883731298538 1.096254881363438 1.112057829847322 1.0410835840025434 1.0 11.988265579959055 DLGQS(ph)NSDLDMPFAK ddPTM_A549_PD325901_60min_R1 2 DLGQSNSDLDMPFAK 15 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 DLGQS(0.968)NS(0.032)DLDMPFAK;DLGQS(0.96)NS(0.04)DLDMPFAK 105.46 1.8241e-06 7398700.0 4985.0 4197.2 5460.3 5010.8 5943.2 5785.0 5052.4 5774.4 5973.2 5713.1 6009.200000000001 True False 5491.073530236958 4550.912774074682 5830.868793451277 5320.305735647522 5525.770134926937 5737.88887801064 5244.671846779362 5659.225062070832 5722.167176362534 5352.373890996256 5270.106495457342 1.0419283813277933 0.8635333608528439 1.1064043579531635 1.0095252800362668 1.0485120442423637 1.0887614667666603 0.9951737884803837 1.0738350481055547 1.0857782819559438 1.0156101960386996 1.0 12.363616400019042 -5.772366599352022 24.999892015600828 1.0454408743325116 0.9527308420168658 0.321234780886292 0.052846143962689066 156.65854869479392 358415.01900543756 0.0069680936295055725 0.0219713040941785 1.689014588249738e-06 5.772366599352022 -0.0927100323156459 DLGS(ph)ELVR ddPTM_A549_MK2206_60min_R1 1 DLGSELVR 8 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 DLGS(1)ELVR 56.729 0.018172999999999998 3392100.0 241.87 183.33 182.69 237.5 333.06 280.92 346.05 158.49 382.74 383.11 335.61 True False 282.6917428462453 192.66071393425807 208.59818908894195 295.6875106617802 284.0673152019141 310.64676794039605 408.92280565624645 180.95644285526856 296.05000111018734 296.56518491854945 252.26877463520847 1.1205974391996383 0.7637120932341063 0.8268886602814158 1.1721130016560992 1.1260502438824926 1.2314118875378242 1.6209806633720978 0.7173160575142103 1.1735499232447155 1.1755921252933326 1.0 7.978817833001974 -6.262278298467492 24.996188836693655 1.1147013053030819 0.8897306615675808 0.18967154331808078 0.2184109153871922 98.89091286979675 2946588.387186299 0.02968607430459255 0.07296546409731716 5.466655441233049e-07 6.262278298467492 -0.22497064373550102 DLGS(ph)ELVR ddPTM_A549_PD325901_60min_R1 2 DLGSELVR 8 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 DLGS(1)ELVR;DLGS(1)ELVR 103.55 0.0021314 5388700.0 1115.2 1003.9 991.95 1410.9 1660.5 1386.7 1119.7 1099.9 1550.9 1311.8 1795.3 True False 1228.4142830331514 1088.5021761873563 1059.2696920799208 1498.0480886136131 1543.8722084140163 1375.4071749589195 1162.3107962233494 1077.9616316451427 1485.72106640003 1228.9727241268113 1574.4894813443668 0.7801984691471412 0.6913365818474356 0.6727702564106499 0.9514500454677635 0.9805541584792246 0.8735575507208455 0.7382143926620065 0.6846420026412198 0.9436208269435102 0.7805531498866931 1.0 10.620668403988056 -5.410900050299142 0.04557669439334459 1.5177968548107554 4.468204484370692e-11 0.0 0.1264806886319181 179.68109311002485 1.266423276278793 14.937350707246212 29.02676771249987 3.882397062405939e-06 5.410900050299142 -1.5177968547660734 DLGSTEDGDGT(ph)DDFLT(ph)DKEDEK ddPTM_A549_PD325901_60min_R1 1 DLGSTEDGDGTDDFLTDKEDEK 22 1 Q15527 Q15527 SURF2 Surfeit locus protein 2 2 DLGS(0.008)T(0.008)EDGDGT(0.984)DDFLT(1)DKEDEK 113.6 1.3533e-12 7236800.0 2861.4 3255.3 3479.2 3627.5 4560.3 3654.5 3927.8 3526.9 3131.6 4044.3 3998.2 True False 3151.887221548654 3529.635555476345 3715.319434129202 3851.56243634976 4240.000260180935 3624.7389636456146 4077.2745783746323 3456.553212700473 2999.989742432351 3788.9422077954423 3506.446746678019 0.8988835277577588 1.0066131929196687 1.0595681904050211 1.0984231943629834 1.2092013843352616 1.0337356376735694 1.162793811780376 0.9857709135252618 0.8555640393724839 1.0805645947382654 1.0 11.775794102253252 -8.515088037435842 24.29194321955525 0.9312085108367557 1.0701344047103287 0.11304204681636953 0.09355871434796684 220.539501803861 687658.4364837842 0.015226435217141584 0.017650449910390786 3.054301901655405e-09 8.515088037435842 0.13892589387357301 DLGSTEDGDGT(ph)DDFLTDKEDEK ddPTM_A549_PD325901_60min_R1 2 DLGSTEDGDGTDDFLTDKEDEK 22 1 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 DLGS(0.001)T(0.001)EDGDGT(0.999)DDFLTDKEDEK;DLGSTEDGDGT(1)DDFLTDKEDEK 149.44 1.4008e-27 40557000.0 3768.4 3836.4 3058.1 3428.4 4338.3 3421.8 3901.8 4329.8 3748.9 3428.8 3992.0 True False 4150.965193850542 4159.706891846973 3265.641055849193 3640.164481538669 4033.59277432251 3393.933995294175 4050.2851341468863 4243.438742337608 3591.3467701509253 3212.3049828373296 3501.009307372979 1.1856481458386252 1.188145053795431 0.9327713151095856 1.039747159161398 1.1521228366425456 0.969415873344493 1.1568907073789136 1.2120615427674253 1.0258032626727667 0.9175368303284284 1.0 11.773555181813535 -14.999999418713417 0.07630457131048891 0.6465554766384974 1.1959257321453955 0.21704616423730017 0.0930950858702911 243.51116483169918 1.3801107542881434 14.236853980868304 1.617401544111999 1.0000013384627172e-15 14.999999418713417 0.5493702555068981 DLGSTEDGDGT(ph)DDFLTDKEDEKAKPPR ddPTM_A549_PD325901_60min_R1 2 DLGSTEDGDGTDDFLTDKEDEKAKPPR 27 3 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 DLGSTEDGDGT(1)DDFLTDKEDEKAKPPR;DLGSTEDGDGT(1)DDFLTDKEDEKAKPPR 197.14 5.380499999999998e-69 20511000.0 2812.6000000000004 3594.5 2393.3 3525.3 3094.3 3821.2 3315.5 2677.9 3464.9 3348.5 3731.8 True False 3098.1330814733137 3897.4211298988453 2555.723730082037 3743.0497744628046 2876.9670427554897 3790.081414114823 3441.6731668112157 2624.4871837280884 3319.282302514323 3137.075138541414 3272.812257829281 0.9466271931920028 1.1908477550386105 0.7808953061600733 1.1436799546043661 0.8790504361724865 1.1580503602209755 1.0515950490523807 0.801905815846828 1.0141988116103744 0.9585258460936297 1.0 11.676315130409508 DLGSTEDGDGTDDFLT(ph)DKEDEK ddPTM_A549_MK2206_60min_R1 4 DLGSTEDGDGTDDFLTDKEDEK 22 1 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 DLGSTEDGDGT(0.001)DDFLT(0.999)DKEDEK;DLGSTEDGDGTDDFLT(1)DKEDEK;DLGSTEDGDGT(0.052)DDFLT(0.948)DKEDEK;DLGSTEDGDGT(0.011)DDFLT(0.989)DKEDEK 105.03 4.257800000000001e-15 13778100.0 6169.41 7133.58 6537.539999999999 6075.280000000001 10293.599999999999 8154.900000000001 7105.6 6432.68 10973.8 9288.4 10807.1 True False 7210.655580407051 7496.64875201628 7464.661476252234 7563.723872729687 8779.425075849469 9017.84610521549 8396.595543623826 7344.532089256287 8488.251821557651 7190.143988926038 8123.398809213556 0.8876402291401387 0.9228463267756328 0.9189086553014999 0.9311033534572887 1.080757609227784 1.1101075198951764 1.033630841083465 0.9041205856994392 1.04491383728819 0.8851152279721857 1.0 12.987867758286798 -6.636656268158861 6.656230604543789 1.0237812482984376 0.9134845260869024 0.30972830529574547 0.06479966155400815 0.13931854634504395 7.629138965558131 0.007434270487387536 0.015557982228307335 2.308573636796309e-07 6.636656268158861 -0.11029672221153519 DLGSTEDGDGTDDFLT(ph)DKEDEK ddPTM_A549_PD325901_60min_R1 2 DLGSTEDGDGTDDFLTDKEDEK 22 1 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 DLGSTEDGDGTDDFLT(1)DKEDEK;DLGSTEDGDGTDDFLT(1)DKEDEK 250.95 3.3403999999999995e-110 196694000.0 14861.3 14736.1 14538.2 15694.3 17097.4 13039.6 15898.7 16038.599999999999 16909.7 15852.1 17493.1 True False 16370.008235689176 15977.962863347451 15524.849677298576 16663.701266658598 15896.537606827955 12933.409820865594 16503.733728602467 15718.697540961703 16199.044114065748 14851.195700663697 15341.559597897365 1.0670367723195995 1.0414823057192508 1.0119472911623881 1.086180395175888 1.0361748103502235 0.8430309668541248 1.0757533237275552 1.0245827642657677 1.0558929169291176 0.9680368938956587 1.0 13.90515753186758 -4.948367865795806 0.8375674245184668 1.020416477150329 1.1149131975608566 0.05812127777611442 0.06290085741636649 10.038958725113824 3.6069204479705945 0.009359479378539806 0.988994659668596 1.1262430765093668e-05 4.948367865795806 0.09449672041052759 DLGSTEDGDGTDDFLT(ph)DKEDEKAKPPR ddPTM_A549_PD325901_60min_R1 2 DLGSTEDGDGTDDFLTDKEDEKAKPPR 27 3 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 DLGSTEDGDGTDDFLT(1)DKEDEKAKPPR;DLGSTEDGDGTDDFLT(1)DKEDEKAKPPR 231.45 1.4292999999999997e-96 67942000.0 5006.0 5470.8 5446.3 5923.6 6980.0 7257.9 6598.799999999999 7827.6 7760.1 6879.700000000001 7076.7 True False 5514.2054347775775 5931.84351577427 5815.91866926244 6289.487318528311 6489.7488796927655 7198.794068749078 6849.92094500191 7671.472377366591 7433.9699834746725 6445.314567903055 6206.310762897386 0.8884836169891206 0.9557761031297468 0.9370975594762687 1.0134019321314318 1.0456693400675054 1.1599151804941776 1.103702538704984 1.2360760958391328 1.1978082096559663 1.038509803027345 1.0 12.599520222080798 -6.606616766489302 1.516152871799312 1.1121829799331535 0.9235848138785633 0.6193436025671395 0.06526152634782431 0.27626259705133904 1.2564442382209493 0.012975189989863783 0.037266225783292715 2.473906225661359e-07 6.606616766489302 -0.18859816605459023 DLGTESQIFISR ddPTM_A549_PD325901_60min_R1 2 DLGTESQIFISR 12 0 P50395-2;P50395 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 ; 140.14 8.290499999999999e-09 5718500.0 3330.5 3650.8 3522.1 2913.5 3803.3 4135.3 3840.7 4295.4 3309.7 3376.3 4175.9 False True 3668.6099082154874 3958.465728483713 3761.1308861078587 3093.460277961415 3536.1693286727077 4101.623487854345 3986.8599402116843 4209.72487732389 3170.6048187917836 3163.1198417970377 3662.290773211129 1.0017254596632745 1.0808715019132398 1.0269886033134572 0.8446790464016165 0.9655621433827777 1.1199611778116692 1.08862463062046 1.149478601785834 0.8657436056099307 0.8636998091289148 1.0 11.838530625337471 -8.779994982232422 24.999975318676583 0.9366011587404858 1.032012051468561 0.2798340035038488 0.08630405596105489 312.3807641649282 420869.23050412047 0.016525985417404365 0.01760905370433104 1.6596060821446572e-09 8.779994982232422 0.09541089272807513 DLGTQNHTSELILSS(ph)PPGQK ddPTM_A549_PD325901_60min_R1 1 DLGTQNHTSELILSSPPGQK 20 0 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 DLGTQNHTSELILS(0.213)S(0.787)PPGQK 99.07799999999999 1.4097999999999998e-07 2742000.0 1516.9 1339.9 1620.1 2106.1 2088.1 2163.9 1919.7 1975.7 2274.8 2266.6 2199.3 True False 1670.8945713172411 1452.8180753794593 1730.0497284527246 2236.189013699858 1941.4390595539332 2146.277915838759 1992.7552340001466 1936.2931135933325 2179.1980668300916 2123.486489179623 1928.8000425113717 0.8662870875623128 0.7532237885518887 0.8969564964339868 1.159367982379477 1.0065527876213156 1.1127529388915933 1.0331580205719526 1.0038848356059784 1.1298206236000972 1.100936562825228 1.0 10.913487872512626 -6.058836717609515 5.091440963769391 1.0611005996016407 0.811773009592442 0.7678262068746147 0.05726116322355386 0.07252031708719969 3.907271926853762 0.008441290911037357 0.023709024446085688 8.73299642535747e-07 6.058836717609515 -0.24932759000919869 DLHAVDVFS(ph)VEGAPENR ddPTM_A549_MK2206_60min_R1 2 DLHAVDVFSVEGAPENR 17 0 Q5T7W0-2;Q5T7W0-4;Q5T7W0;B5MDS3;Q5T7W0-3 Q5T7W0-2 ZNF618 Zinc finger protein 618 1 DLHAVDVFS(1)VEGAPENR;DLHAVDVFS(1)VEGAPENR 109.89 1.958e-09 6131600.0 118.08 104.53 0.0 0.0 508.53 149.62 307.28999999999996 415.51 511.70000000000005 367.84 532.17 True False 138.00901722117106 109.8501305162712 0.0 0.0 433.7259106456173 165.45268909028204 363.1206153738126 474.4098149460067 395.80076701699045 284.7446885240248 400.01750185518546 0.3450074473769729 0.27461331068468897 0.0 0.0 1.0842673348893495 0.41361362521127715 0.9077618196447558 1.1859726455612754 0.989458624138597 0.7118305754209431 1.0 8.643919312992974 -7.053852493106054 1.1433599337684488 0.9996854909671806 0.15455071786394914 0.6021223992336378 0.2630855576864903 0.19802169696602837 0.5088665155382389 0.03824091018614447 0.0931343746715096 8.83379886954046e-08 7.053852493106054 -0.8451347731032315 DLHAVDVFS(ph)VEGAPENR ddPTM_A549_PD325901_60min_R1 1 DLHAVDVFSVEGAPENR 17 0 Q5T7W0-2;Q5T7W0-4;Q5T7W0;B5MDS3;Q5T7W0-3 Q5T7W0-2 ZNF618 Zinc finger protein 618 1 DLHAVDVFS(1)VEGAPENR 94.632 1.0554999999999999e-06 5696800.0 564.89 575.21 490.91 480.58 538.09 508.98 632.62 515.68 381.62 766.21 501.03 True False 622.2372169499614 623.6849653996708 524.2261046816418 510.26433512362996 500.2964147097247 504.8350356317813 656.6947002829467 505.3943578568657 365.5818385192978 717.8313698377833 439.4064862908526 1.416085643619947 1.4193804253195303 1.1930322401628028 1.1612580857212813 1.1385731215141137 1.1489021017719345 1.4945038836961233 1.1501750056605544 0.8319900819063268 1.6336385379678606 1.0 8.779412356009695 -8.5923132384559 5.256923570888627 0.9217815298709846 1.2719410665268256 0.0 0.24591426768024996 0.10136803491471852 5.280541335629275 0.022329399188125522 0.025402590715415986 2.5567411512019447e-09 8.5923132384559 0.350159536655841 DLHILPPPLIPT(ph)PPPDDPR ddPTM_A549_MK2206_60min_R1 2 DLHILPPPLIPTPPPDDPR 19 0 Q9NRS6;E9PK26;E9PMW6;Q9NRS6-2 Q9NRS6 SNX15 Sorting nexin-15 1 DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR 53.443999999999996 0.010506 32497000.0 1687.67 1858.19 1577.9899999999998 1797.76 1605.5 1642.3899999999999 1334.9299999999998 1713.17 2733.0 2130.3599999999997 2351.3 True False 1972.5074364299956 1952.7639340287944 1801.7727100577993 2238.2112807045137 1369.3330767929901 1816.1866196697524 1577.4695013861942 1956.0170938630847 2113.9798637041927 1649.1101964007216 1767.4073174213086 1.116045756395268 1.1048748722382375 1.0194439574272165 1.2663811327714314 0.7747693829800826 1.027599355150127 0.8925330826895985 1.1067155118023175 1.1960909309737056 0.9330674260231165 1.0 10.787418846965485 -5.442720373393698 1.2936043885959299 1.0633342823391085 1.1326103087153907 0.0 0.1341328899996976 5.056776774257457 9.0720946730067 0.019798810735566608 0.4209425617950531 3.6081088140593514e-06 5.442720373393698 0.06927602637628216 DLHILPPPLIPT(ph)PPPDDPR ddPTM_A549_PD325901_60min_R1 1 DLHILPPPLIPTPPPDDPR 19 0 Q9NRS6;E9PK26;E9PMW6;Q9NRS6-2 Q9NRS6 SNX15 Sorting nexin-15 1 DLHILPPPLIPT(1)PPPDDPR 60.464 0.0025824999999999997 6465000.0 652.68 773.65 500.33 705.34 847.79 826.88 762.2 733.08 874.09 859.2 866.8 True False 718.9395931223788 838.848200624911 534.2854025287033 748.9072498566344 788.2441551167235 820.1461634311906 791.2059380918438 718.4581443098652 837.355037029855 804.9499653680109 760.1890950979201 0.9457378404379401 1.1034730779936521 0.7028322373657332 0.9851591593275453 1.0369053702555278 1.0788712554809108 1.040801483728109 0.945104512736164 1.1015088777641504 1.058881231733961 1.0 9.570214519682585 -6.520235669757289 23.459759517214536 1.0410935321240675 0.9206328708513742 0.2371094472805303 0.09429725034613105 48.999197091927435 434909.4178863451 0.013026083863127714 0.027548214752081985 3.018313389157671e-07 6.520235669757289 -0.12046066127269328 DLHQGIEAAS(ph)DEEDLR ddPTM_A549_MK2206_60min_R1 2 DLHQGIEAASDEEDLR 16 0 A0A0C4DGG1;Q9UKS6;E9PIY1 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DLHQGIEAAS(1)DEEDLR;DLHQGIEAAS(1)DEEDLR 109.65 1.6477999999999997e-07 29509000.0 327.38 376.02 226.01 402.92 446.53000000000003 376.65999999999997 378.62 228.5 468.09 530.77 606.8199999999999 True False 382.6337403274641 395.1578118887239 258.06161648690005 501.6354180877659 380.84602851471436 416.51791119332756 447.41035306333737 260.8905747519016 362.0683623861306 410.86868836422565 456.12984661999667 0.8388702102325648 0.8663274609563781 0.5657634956343738 1.0997645118050783 0.8349509056178875 0.9131564493746669 0.9808837469828552 0.5719655854251748 0.7937835356952009 0.9007713294993427 1.0 8.83330076506102 -10.75092616219084 1.102122152027237 0.9962258176418783 0.8295209324919515 0.0756861996117556 0.15074318593338204 0.7199691830777517 1.6063092070600393 0.087331710840696 0.02449361187589858 1.7744911503949713e-11 10.75092616219084 -0.16670488514992687 DLHQGIEAAS(ph)DEEDLR ddPTM_A549_PD325901_60min_R1 3 DLHQGIEAASDEEDLR 16 0 A0A0C4DGG1;Q9UKS6;E9PIY1 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DLHQGIEAAS(1)DEEDLR;DLHQGIEAAS(1)DEEDLR;DLHQGIEAAS(1)DEEDLR 136.49 5.6866999999999993e-11 37607200.0 1413.3 1729.03 1418.0 1918.02 1961.9699999999998 1780.92 1719.7 1539.3600000000001 1579.4 2054.5 2047.29 True False 1556.7771755835295 1874.741426131312 1514.2340071266985 2036.4917392605282 1824.1679956290554 1766.416777982144 1785.1441245559474 1508.6562571954416 1513.0233105114496 1924.778519376836 1795.4863088405893 0.8670504296904369 1.0441413097390313 0.8433559196029149 1.134228498002619 1.0159743277613666 0.9838096616413541 0.9942398979965933 0.8402493796622909 0.8426816194930852 1.0720095775164864 1.0 10.810158936693846 -8.159613880952127 21.281383059610977 0.9172040718429683 0.9873059441527446 0.028950838061433837 0.0968492715707483 19.46143697102689 4056.9502361166747 0.014714220954651256 0.01899601054311691 6.924463319484212e-09 8.159613880952127 0.07010187230977638 DLHS(ph)DDNEEESDEVEDNDNDSEMERPVNR ddPTM_A549_MK2206_60min_R1 2 DLHSDDNEEESDEVEDNDNDSEMERPVNR 29 1 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 DLHS(0.998)DDNEEES(0.001)DEVEDNDNDS(0.001)EMERPVNR;DLHS(1)DDNEEESDEVEDNDNDSEMERPVNR 68.041 0.0001302 8591600.0 158.53 173.13 122.61 190.94 255.22 148.01 378.26 170.12 286.4 115.22 622.76 True False 185.28598831361998 181.9415775019806 139.99794167275263 237.72030857162227 217.6774760878896 163.67231995891353 446.98494572325296 194.23503097064983 221.53085728682063 89.19172197623467 468.1115046983774 0.39581592516724623 0.38867145044686024 0.29906964530375896 0.5078283831643804 0.4650120193652316 0.3496438739833451 0.9548685328963724 0.4149332563313159 0.4732437785940802 0.1905352059947862 1.0 8.87070841213571 -14.99999999999949 0.19181654684631125 3.406234615858804 0.36555318022098743 0.0 0.2906108902055457 23.017219503683187 0.26498477161229533 20.769213621112527 0.14878124897513123 1.000000000001174e-15 14.99999999999949 -3.0406814356378167 DLHSDDNEEES(ph)DEVEDNDNDSEMERPVNR ddPTM_A549_MK2206_60min_R1 2 DLHSDDNEEESDEVEDNDNDSEMERPVNR 29 1 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 DLHS(0.001)DDNEEES(0.974)DEVEDNDNDS(0.024)EMERPVNR;DLHS(0.01)DDNEEES(0.982)DEVEDNDNDS(0.008)EMERPVNR 46.132 0.005000999999999999 2958000.0 0.0 0.0 0.0 158.36 128.65 231.39 170.21 0.0 170.21 395.9 260.77 True False 0.0 0.0 0.0 197.15820710905058 109.7257554216245 255.87553621574904 201.1349537660733 0.0 131.65770676951718 306.4659150355085 196.01361211413052 0.0 0.0 0.0 1.0058393648409152 0.5597864058427523 1.3053967704383889 1.0261274796005535 0.0 0.671676346094058 1.5634930234185278 1.0 7.614810035174667 -6.252926278886413 24.24670371991698 0.815588125154721 1.2679933964743417e-07 0.5034177667231201 0.38907039996649195 239.36435292930253 681745.3262837167 0.045416616777121936 0.11797932692058655 5.585650026170807e-07 6.252926278886413 -0.8155879983553813 DLHSDDNEEES(ph)DEVEDNDNDSEMERPVNR ddPTM_A549_PD325901_60min_R1 1 DLHSDDNEEESDEVEDNDNDSEMERPVNR 29 1 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 DLHS(0.001)DDNEEES(0.995)DEVEDNDNDS(0.004)EMERPVNR 54.141000000000005 0.0018194000000000003 1850700.0 0.0 0.0 0.0 0.0 139.66 0.0 0.0 0.0 0.0 0.0 173.68 True False 0.0 0.0 0.0 0.0 129.85076340084407 0.0 0.0 0.0 0.0 0.0 152.3184610482313 0.0 0.0 0.0 0.0 0.8524952425807868 0.0 0.0 0.0 0.0 0.0 1.0 7.250946997316695 -10.705002768558833 0.8450442216054617 1.0313761860594328 0.09611118779598285 0.0 0.379330074440372 0.33226817500058553 0.399502320535898 0.20158550438963407 0.0462224237726892 1.9724101622710447e-11 10.705002768558833 -0.93526499826345 DLIDNS(ph)FNR ddPTM_A549_MK2206_60min_R1 2 DLIDNSFNR 9 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 DLIDNS(1)FNR;DLIDNS(1)FNR 138.25 4.3031e-05 36160000.0 3101.4 2858.5 2229.78 2507.0 4010.0 2645.9 2640.72 2999.2 4573.6 4151.8 4713.5 True False 3624.840498049966 3003.985440359336 2545.9963329505767 3121.215112543506 3420.1343120148804 2925.887381793726 3120.504641966661 3424.345784664782 3537.6869025384153 3213.9054964496704 3543.0078640179213 1.0230969383001152 0.8478630462176533 0.7185974264429966 0.8809506589702897 0.9653194244215713 0.8258201771179942 0.8807501314512681 0.9665080959717173 0.9984981796022683 0.9071121543616799 1.0 11.790758952310542 -8.34796741855242 2.894190728229497 0.9989655064255112 0.870939137926138 0.21168589270708427 0.07770969847241106 0.2052989585109676 3.3583618389220744 0.01213955981022838 0.015000891805533201 4.487790567731646e-09 8.34796741855242 -0.1280263684993732 DLIDNS(ph)FNR ddPTM_A549_PD325901_60min_R1 2 DLIDNSFNR 9 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 DLIDNS(1)FNR;DLIDNS(1)FNR 110.74 0.00034914 46033000.0 6144.4 5521.9 5506.299999999999 5725.4 7068.1 5889.299999999999 5752.700000000001 6117.0 6646.5 6178.0 6812.6 True False 6768.174964731791 5987.249892109733 5879.990630071748 6079.044954673172 6571.661039621263 5841.339493391195 5971.622146498233 5994.99163630633 6367.1707188263545 5787.920025655922 5974.693388629547 1.132807078872419 1.0021016147044604 0.9841493525445123 1.0174655935051355 1.0999160311938025 0.9776802110896371 0.9994859582021131 1.003397370602383 1.0656899533863498 0.9687392555860566 1.0 12.544648962934772 DLIEDSSVQKDGLNQTTIPVS(ph)PPSTTKPSR ddPTM_A549_MK2206_60min_R1 2 DLIEDSSVQKDGLNQTTIPVSPPSTTKPSR 30 2 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DLIEDSSVQKDGLNQTTIPVS(0.991)PPS(0.003)T(0.003)T(0.003)KPS(0.001)R;DLIEDSSVQKDGLNQTTIPVS(0.91)PPS(0.023)T(0.023)T(0.023)KPS(0.023)R 129.01 5.1247e-28 37412000.0 3285.5 3426.3 3439.4 2796.0 4990.0 3409.7 3287.3 2454.2 5723.7 4737.9 5213.1 True False 3840.012077237108 3600.6840350894486 3927.158637870199 3481.0201255172083 4255.977610213032 3770.512190824322 3884.559858499574 2802.0903656722844 4427.291088870724 3667.605099385544 3918.543395759379 0.979959053507674 0.9188832868320622 1.0021985827999618 0.8883454319491126 1.08611215453651 0.9622229001992793 0.9913275077426521 0.7150846839426832 1.129830817660947 0.9359613328142802 1.0 11.936101758839351 DLIEDSSVQKDGLNQTTIPVS(ph)PPSTTKPSR ddPTM_A549_PD325901_60min_R1 2 DLIEDSSVQKDGLNQTTIPVSPPSTTKPSR 30 2 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 DLIEDSSVQKDGLNQT(0.001)T(0.001)IPVS(0.983)PPS(0.004)T(0.004)T(0.004)KPS(0.004)R;DLIEDSSVQKDGLNQTTIPVS(0.96)PPS(0.009)T(0.009)T(0.009)KPS(0.012)R 110.98 1.3947000000000002e-15 43373000.0 2770.2 3638.8 3868.0 3981.1000000000004 4577.0 4377.8 4167.1 5264.5 4441.6 4300.200000000001 4411.6 True False 3051.4286646865444 3945.4544463697125 4130.505740173534 4227.003505265896 4255.527309792807 4342.148648254962 4325.681270824618 5159.495417579642 4254.934998080064 4028.6846381232754 3869.0011674365323 0.7886864161140371 1.0197604693368019 1.0675896856630482 1.0925309459305652 1.0999033408440073 1.1222918940424929 1.1180356592372565 1.3335471338195917 1.099750249209472 1.0412725310167181 1.0 11.91774544876362 -5.169399227016125 1.8993645259047012 1.0848721468710583 0.6460238271275767 0.5482823578244542 0.08210575209095236 0.7479066743735022 2.276837635353052 0.013181918887245044 0.6229326083180701 6.770188690503327e-06 5.169399227016125 -0.4388483197434816 DLINLAK ddPTM_A549_MK2206_60min_R1 1 DLINLAK 7 0 M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087 M0R0P1 FBL rRNA 2-O-methyltransferase fibrillarin 0 102.72 0.029310000000000003 1132400.0 1850.4 2090.9 1283.4 1817.0 1502.6 1187.2 1219.4 1450.3 1860.5 2075.9 2698.9 False True 2162.702282063472 2197.3178790440193 1465.4054183411681 2262.16508156823 1281.5695304821832 1312.82871600042 1440.9491958307378 1655.884466357474 1439.0997206079953 1606.9527482248352 2028.6886441493527 1.0660592438867387 1.083122284625088 0.7223412141470461 1.1150873684299525 0.6317231252701948 0.6471316925771529 0.7102860263877213 0.816233911070075 0.7093743659276126 0.7921140352706242 1.0 10.986331747090286 -5.747157395983091 24.90312767266889 0.826960180610476 1.074590968137917 0.3478961190300227 0.14247014873979164 232.28979146089358 405030.203762489 0.021923748758404207 0.08409853926971105 1.789957024460437e-06 5.747157395983091 0.24763078752744105 DLISLDS(ph)SPAKER ddPTM_A549_MK2206_60min_R1 1 DLISLDSSPAKER 13 1 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLIS(0.001)LDS(0.873)S(0.126)PAKER 84.759 9.819200000000001e-05 22726000.0 787.28 1078.3 903.73 776.06 1416.5 1104.8 828.37 1078.0 1576.1 1548.8 1328.5 True False 920.1536168519951 1133.180864208316 1031.8925032861648 966.1947348386566 1208.134726426203 1221.7092026931132 978.874106405042 1230.8098012365422 1219.1158665145172 1198.9250043116847 998.5967852652615 0.9214466043044299 1.1347731946756712 1.0333425047148121 0.967552418649137 1.2098323810498561 1.2234259319877396 0.9802496070974428 1.2325393185695035 1.2208289516881212 1.2006097175580324 1.0 9.963758452051252 -6.75002605870034 24.998877204844927 1.122101497798589 1.0242471433535523 0.2803997823586599 0.09871089820889598 339.8268387652221 744326.195195324 0.015876386687002114 0.03281643580333494 1.7781727122520966e-07 6.75002605870034 -0.09785435444503676 DLISLDS(ph)SPAKER ddPTM_A549_PD325901_60min_R1 1 DLISLDSSPAKER 13 1 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLISLDS(0.619)S(0.381)PAKER 124.45 1.1851999999999999e-06 55551000.0 2341.6 2233.8 2509.9 1750.0 2333.3 2568.8 2960.9 2025.4 2535.1 2122.0 2506.9 True False 2579.317508205188 2422.0501655217827 2680.2369072547945 1858.0935254616352 2169.417057448012 2547.8805444829245 3073.5786697666485 1985.0018081044389 2428.5585630477226 1988.0165578572155 2198.5671925484266 1.173181114021547 1.1016493713409368 1.219083463238642 0.845138384562112 0.9867413035183948 1.1588822725629768 1.3979916921274393 0.9028615613078272 1.1046096618192078 0.9042327951563967 1.0 11.102347909491506 -10.763485979397036 0.6129283112279837 0.9855787363438848 1.0995431701413696 0.11385193672283433 0.1470182629047504 3.049851117572284 1.609729756604177 0.19360155650768968 0.030449249551731023 1.7239077441307594e-11 10.763485979397036 0.11396443379748478 DLISLDSS(ph)PAKER ddPTM_A549_MK2206_60min_R1 1 DLISLDSSPAKER 13 1 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLISLDS(0.054)S(0.946)PAKER 137.73 3.3435e-09 26812000.0 1588.6 1855.0 2112.3 1692.8 2415.7 1947.8 1760.2 2091.5 3061.2 2731.9 2925.1 True False 1856.7168424589458 1949.4115766543875 2411.855902417056 2107.5360759926784 2060.35373005844 2153.914903155001 2080.005555602153 2387.976529950117 2367.843087731895 2114.7618926130494 2198.716941346945 0.8444546942552377 0.8866132515721502 1.0969378809350243 0.9585299664365123 0.9370709304655909 0.9796235534690981 0.946008791076095 1.0860772867321569 1.0769203817028592 0.9618163451806286 1.0 11.102446170983148 -8.245168067684096 24.190225089692902 1.0410699683001863 0.9540958702162431 0.24872500029878064 0.06693572061182138 533.6553074083439 793375.2513180015 0.010631766901185367 0.013699774591945565 5.686328329568148e-09 8.245168067684096 -0.08697409808394319 DLISLDSS(ph)PAKER ddPTM_A549_PD325901_60min_R1 1 DLISLDSSPAKER 13 1 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLISLDS(0.256)S(0.744)PAKER 118.21 3.9191e-06 38345000.0 2576.5 2556.0 2921.8 2433.0 2621.2 2675.3 3056.5 2654.6 2275.4 2661.2 2700.4 True False 2838.0643832809496 2771.4030902827817 3120.0909182107093 2583.280884256091 2437.095954649093 2653.5132437928896 3172.816780080976 2601.6519205065856 2179.7728509166473 2493.1713778367666 2368.2679192459905 1.1983713329970425 1.1702236338045493 1.3174569029352408 1.0907891219835282 1.0290626051401381 1.1204447023197086 1.3397203729766936 1.0985462832832276 0.9204080472494192 1.052740425851203 1.0 11.209616585182637 -8.593058946205135 5.107505881678269 0.9631558638778029 1.1770286719351928 0.4469832195880441 0.09086999144717704 0.11510231388451196 5.678810461722105 0.015403145573580627 0.017528383627189236 2.5523548514635423e-09 8.593058946205135 0.21387280805738984 DLISNS(ph)PR ddPTM_A549_MK2206_60min_R1 2 DLISNSPR 8 0 P19387 P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 1 DLIS(0.004)NS(0.996)PR;DLIS(0.001)NS(0.999)PR 101.38 0.0023001 10802200.0 3756.3 3429.2 3453.5 3364.3 4902.3 3678.1 4244.3 3236.2 5222.7 5002.4 5607.5 True False 4390.271607282221 3603.7316327025474 3943.258229890313 4188.553651029165 4181.178164037539 4067.3141006748187 5015.43437089093 3694.941260446845 4039.7667889381205 3872.354365682312 4215.002990873131 1.0415820858937952 0.8549772421290833 0.9355291653241444 0.9937249534813527 0.9919751357451385 0.9649611422534913 1.1899005485289087 0.8766165216128218 0.9584256043674335 0.9187073826678733 1.0 12.04131793953438 -6.256784231249333 21.791434527569812 0.9879758779286251 0.9351242469950498 0.046134986575441905 0.0838429831782258 135.27435371126205 633212.4050243229 0.010562393291490021 0.026869920156793816 5.536250961913138e-07 6.256784231249333 -0.052851630933575255 DLISNS(ph)PR ddPTM_A549_PD325901_60min_R1 1 DLISNSPR 8 0 P19387 P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 1 DLISNS(1)PR 132.88 0.0010764000000000001 10014000.0 3024.3 2692.1 2575.8 2745.6 3144.2 2597.0 2607.4 2922.8 3111.5 3008.2 3665.2 True False 3331.324709628012 2918.9727149257715 2750.6092775436878 2915.1894762899815 2923.3622389011466 2575.850893032607 2706.6260338240254 2864.5024611077565 2980.7344755327185 2818.2617386173774 3214.403635617097 1.0363741108040618 0.9080915298197736 0.8557137153111855 0.9069145654230594 0.9094571094024797 0.8013464346826185 0.8420305414769141 0.8911458503119298 0.9273055948869598 0.8767603755140513 1.0 11.650335385591758 -9.685807832933374 0.9163699950995049 0.9886017803125163 0.8908002652318348 0.0 0.06537588033844652 0.4225987563663848 0.7417149583313464 0.018895092776922296 0.011761204443093759 2.0615419046565614e-10 9.685807832933374 -0.09780151508068158 DLKDYFSK ddPTM_A549_PD325901_60min_R1 2 DLKDYFSK 8 1 D6RAF8;Q14103-3;Q14103;D6RD83;D6RF44;H0YA96;H0Y8G5;Q14103-4;Q14103-2;D6RBQ9 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 ; 53.683 0.024791 6099900.0 5920.4 6074.7 6331.5 6783.5 7446.8 7606.299999999999 6490.1 6933.4 7191.8 7387.5 7722.6 False True 6521.434649631876 6586.636288161505 6761.193664402465 7202.501388553717 6923.762458065341 7544.356814660729 6737.08430701899 6795.107897852922 6889.5536561581885 6921.051989241361 6772.769157594832 0.9628904363762176 0.9725174644075087 0.9982908773467665 1.0634500041208392 1.0222941749463272 1.11392498978068 0.9947311284726388 1.003298317089848 1.0172432421430453 1.0218939739707869 1.0 12.72553010858014 -5.865390027981032 3.650226534614645 1.0188350648707412 0.9669440056323024 0.3071415634440412 0.033492034309509436 0.23898558592717944 6.026782566550907 0.004791420501609674 0.01729140627208738 1.3633581919700353e-06 5.865390027981032 -0.05189105923843873 DLKEVT(ph)PEGLQMVK ddPTM_A549_PD325901_60min_R1 2 DLKEVTPEGLQMVK 14 1 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 DLKEVT(1)PEGLQMVK;DLKEVT(1)PEGLQMVK 41.348 0.026892000000000003 9791700.0 4544.0 6559.299999999999 5286.200000000001 8346.3 6395.0 6455.0 5310.0 5640.6 8936.5 6161.5 5888.7 True False 5005.3035348839985 7112.075230865353 5644.953320502931 8861.831995177405 5945.837261552324 6402.432620148427 5512.074955743495 5528.093808034906 8560.929982515865 5772.461838471831 5164.427231544907 0.9691885102593831 1.3771275907275817 1.0930453789769592 1.7159370435211732 1.1513062329999493 1.2397178492595737 1.0673158336078619 1.0704176010591615 1.657672690250089 1.1177351484813223 1.0 12.334392638393131 DLKIES(ph)DVQEPTEPEDDLDIMLGNK ddPTM_A549_PD325901_60min_R1 2 DLKIESDVQEPTEPEDDLDIMLGNK 25 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 DLKIES(1)DVQEPTEPEDDLDIMLGNK;DLKIES(1)DVQEPTEPEDDLDIMLGNK 126.36 1.2994999999999999e-18 22520400.0 2855.0 2917.4 2832.6000000000004 3186.0 3798.0 2844.8999999999996 3321.2 3135.7 3393.0 2977.5 2786.0 True False 3144.837498260085 3163.259536616192 3024.8372698075373 3382.79198406901 3531.2415823887 2821.7320776235883 3447.590083430373 3073.156003590939 3250.4040094753345 2789.500141856672 2443.3396619090995 1.2871061470851217 1.2946458431180967 1.237992947506973 1.384495179612429 1.445252020191728 1.1548668904342316 1.4110154790090068 1.2577686399891423 1.330311974281806 1.1416751364307247 1.0 11.254638719077528 -10.716579373113875 0.6880377919700085 0.9686777151676794 1.3158701379112416 0.5027346859787738 0.08817478294040272 0.39270657593716396 0.2826845247896025 0.08030189283757183 0.014852546287436126 1.9205279275594087e-11 10.716579373113875 0.3471924227435622 DLKPENILLDEEGHIK ddPTM_A549_PD325901_60min_R1 1 DLKPENILLDEEGHIK 16 1 B4DG22;B1AXG1;B7ZB17;P51812;E9PMM7;D6R910;A0A2R8Y7S9;B7Z3B5;F2Z2J1;Q15349;Q15349-3;Q15349-2;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2 B4DG22;E9PGT3 RPS6KA3;RPS6KA1;RPS6KA2 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase alpha-1 0 67.358 0.0080815 1171000.0 282.1 534.24 309.65 447.6 552.5 577.04 384.53 264.53 560.59 320.14 510.61 False True 310.7385843289562 579.2622797154431 330.6647110767152 475.2472354266446 513.694306021526 572.340777557002 399.1634995728898 259.25374163022957 537.030351804238 299.9263057645658 447.80820702347603 0.693909980780379 1.293549940868046 0.7384069918561817 1.0612740632547855 1.1471301730622279 1.2780935422360344 0.8913715588780264 0.5789392368519909 1.1992418704735452 0.6697650937622106 1.0 8.806737158616352 -5.229947685603501 22.888354672785383 1.0507478921229763 0.693908036583779 0.052535282681623 0.24033575409002297 5217.85925189031 3792174.7920825793 0.02843545713866049 4.44764743940863 5.8891459076273785e-06 5.229947685603501 -0.3568398555391973 DLKPENILYADDT(ph)PGAPVK ddPTM_A549_MK2206_60min_R1 1 DLKPENILYADDTPGAPVK 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 DLKPENILY(0.001)ADDT(0.999)PGAPVK 77.045 0.00015441 1769200.0 1414.1 1153.9 1560.1 1077.5 2207.3 1620.0 1672.2 1681.2 1897.7 2003.0 2102.6 True False 1652.765508574339 1212.6285812946078 1781.345639047887 1341.4875483708133 1882.609093992629 1791.4273247310323 1976.0170946926032 1919.5152484590667 1467.873980004188 1550.520908856084 1580.4663911921245 1.0457454317188486 0.7672599607638213 1.1271012461734424 0.8487922020024401 1.1911731274289243 1.1334801769367475 1.2502746693665028 1.214524560064325 0.9287600091875351 0.9810527560073877 1.0 10.626134641147148 -4.907321523152974 20.76147649687598 1.013543182145128 3.750219666573973 0.0 0.15120532939066356 6248.038190072785 1593019.8773553162 0.02094413904589007 111592.12832634397 1.2378798021844861e-05 4.907321523152974 2.7366764844288447 DLKS(ph)LEDPPTR ddPTM_A549_PD325901_60min_R1 2 DLKSLEDPPTR 11 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 DLKS(0.999)LEDPPT(0.001)R;DLKS(0.997)LEDPPT(0.003)R 47.666000000000004 0.008849700000000002 11784500.0 2864.9 3154.3 2502.5 2374.67 3559.0 3395.6 3545.1 3144.2 3715.1 3985.8 3703.2 True False 3155.742538972091 3420.1239310168125 2672.3346987549817 2521.3479726331343 3309.02811788346 3367.947359407592 3680.010720453155 3081.4864644228182 3558.9672666082583 3734.135907779119 3247.7298765189425 0.9716764198242227 1.0530814017952286 0.8228315778587183 0.7763416504748308 1.0188741809495006 1.037015850289096 1.133102462449109 0.948812426397262 1.0958322896062136 1.149768007116875 1.0 11.665215928880803 -6.97449960914526 24.8747326427927 1.0443915777592665 0.9089325539996889 0.40528120628045783 0.08659716365211147 177.62148583333607 173262.56502257462 0.012090776339351562 0.022848876602299523 1.0604748927741708e-07 6.97449960914526 -0.13545902375957763 DLLAEQQPHHLATAVPLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 DLLAEQQPHHLATAVPLTPR 20 0 Q7L9B9 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 DLLAEQQPHHLAT(0.051)AVPLT(0.949)PR;DLLAEQQPHHLAT(0.225)AVPLT(0.775)PR 92.993 1.3858000000000001e-06 11237300.0 527.28 648.65 442.75 577.72 1002.25 571.0600000000001 788.56 858.06 1015.55 1059.26 1044.76 True False 616.271973241693 681.6635143918427 505.53860758185476 719.2614259348362 854.8203526725468 631.4891901610509 931.8311447140289 979.6926326985407 785.5295465001066 819.9724303119801 785.31725809088 0.7847426844277698 0.8680103580672334 0.6437380592027583 0.9158864376460709 1.0885032053804982 0.8041198428469688 1.186566492858347 1.247511910129405 1.0002703218438656 1.0441288814986027 1.0 9.617131791814826 -6.506283951416324 6.326659488044451 1.0230006011820447 0.7753713450586711 0.5189589651980098 0.11943663073695016 0.11112721931872713 18.02527338123044 0.016764451623635847 0.03762346905853987 3.116851051029532e-07 6.506283951416324 -0.2476292561233736 DLLAEQQPHHLATAVPLT(ph)PR ddPTM_A549_PD325901_60min_R1 4 DLLAEQQPHHLATAVPLTPR 20 0 Q7L9B9 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 DLLAEQQPHHLAT(0.036)AVPLT(0.964)PR;DLLAEQQPHHLAT(0.029)AVPLT(0.971)PR;DLLAEQQPHHLAT(0.037)AVPLT(0.963)PR;DLLAEQQPHHLAT(0.015)AVPLT(0.985)PR 116.08 3.2945999999999995e-14 31467900.0 5336.24 5773.63 5212.09 5343.35 5794.38 5880.97 5997.8099999999995 6077.4400000000005 5833.67 5849.469999999999 5692.17 True False 5877.97115646774 6260.194062656246 5565.813770243296 5673.396593871679 5387.40273832581 5833.077330149388 6226.059941677562 5956.220691540554 5588.501137033887 5480.133465923206 4992.069175638589 1.1774618799660015 1.2540279075470622 1.1149312187829035 1.136481966547656 1.0791923246209123 1.1684688502745393 1.2471902376795732 1.1931366497497764 1.119475900755923 1.0977679341196598 1.0 12.285422210580853 -9.888302738448665 0.7526802573361102 1.0090240112570226 1.1693790242506186 0.36159692264190624 0.056734733446341036 0.3204554361879657 0.3740025567827431 0.02448233716087223 0.011686885609311904 1.293293996434243e-10 9.888302738448665 0.160355012993596 DLLDDLK ddPTM_A549_MK2206_60min_R1 1 DLLDDLK 7 0 P08758;E9PHT9 P08758 ANXA5 Annexin A5;Annexin 0 81.958 0.042046 822180.0 365.76 422.24 371.36 318.77 343.48 484.37 464.93 469.7 539.85 527.37 392.93 False True 427.49134602655437 443.730212467142 424.02443209847024 396.8686643101293 292.9545470052046 535.6257119012159 549.4017628486016 536.2814133959217 417.5748369633034 408.2367507256279 295.3546366836878 1.447383223187315 1.5023641323171715 1.43564508368488 1.3437021634949267 0.991873871677005 1.8135002650215655 1.8601426712558689 1.8157203131036546 1.4138083005973199 1.3821917790403002 1.0 8.206304450349045 -10.070550924196697 0.9732255530476239 1.044627606339076 1.5123288527873926 0.1441199601848031 0.25963172031276166 0.4081141290645344 0.776595217419017 0.10103720184321478 0.049897416837392634 8.500590117220477e-11 10.070550924196697 0.46770124644831657 DLLEEEEAWEASHKNDLQDT(ph)EISPR ddPTM_A549_PD325901_60min_R1 1 DLLEEEEAWEASHKNDLQDTEISPR 25 1 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 DLLEEEEAWEASHKNDLQDT(0.973)EIS(0.027)PR 221.8 4.6231999999999994e-95 18271000.0 1050.5 868.72 980.27 932.28 1267.3 895.81 889.93 1215.6 1229.7 941.55 1146.7 True False 1157.1459866627736 941.9300831731048 1046.797017042376 989.864818238499 1178.2892199476566 888.5148203648586 923.7967731383817 1191.3539043802477 1178.0199853969418 882.100372314072 1005.6631695302093 1.1506297751794259 0.936625812411051 1.0409022113551023 0.9842906136265381 1.1716539450262347 0.8835113458315511 0.9185946160978818 1.1846450585803823 1.1713862266102955 0.8771330193250897 1.0 9.973931463544343 -8.26071859513809 24.997428565283677 1.090972179516779 1.0106003452194692 0.007370028729809852 0.11540047566442961 110.00727562528971 3815137.765757073 0.01691359011012153 0.021186619588254046 5.486323408394724e-09 8.26071859513809 -0.08037183429730987 DLLEEEEAWEASHKNDLQDTEIS(ph)PR ddPTM_A549_MK2206_60min_R1 2 DLLEEEEAWEASHKNDLQDTEISPR 25 1 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 DLLEEEEAWEASHKNDLQDT(0.161)EIS(0.839)PR;DLLEEEEAWEASHKNDLQDT(0.348)EIS(0.652)PR 157.42 1.059e-40 9883800.0 1350.81 1675.79 1169.8899999999999 1246.94 1725.8899999999999 1380.2 1031.77 1310.08 1892.5900000000001 1370.6799999999998 1937.25 True False 1578.7937038662774 1761.0805531221856 1335.7979935040908 1552.4403559772638 1472.013867272659 1526.251847897389 1219.2292535527972 1495.787851951733 1463.921386845195 1061.042436021396 1456.1773596199678 1.0842042649793084 1.2093860280740742 0.9173319339703966 1.0661066426567838 1.0108753975249445 1.0481222206996195 0.8372807374721104 1.02720169495157 1.005318052209827 0.7286491779396338 1.0 10.507970368399901 -5.75752189964141 24.999999918334225 0.996767791470902 1.1467951534710363 0.2722363778886615 0.10450011081067254 60.24993480321637 384477.4639031681 0.008155329984352653 0.029379034113248333 1.7477451287710495e-06 5.75752189964141 0.15002736200013433 DLLEEEEAWEASHKNDLQDTEIS(ph)PR ddPTM_A549_PD325901_60min_R1 1 DLLEEEEAWEASHKNDLQDTEISPR 25 1 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 DLLEEEEAWEASHKNDLQDT(0.002)EIS(0.998)PR 244.74 7.845699999999997e-112 14167000.0 1202.7 809.75 894.93 1423.3 1250.5 669.61 914.46 1072.9 906.93 1335.8 1308.9 True False 1324.7972186190561 877.9904743178718 955.6653314512671 1511.2140084511695 1162.669193990803 664.1569181684882 949.2602757117132 1051.5001678262327 868.814886034031 1251.4573600309452 1147.9135978007246 1.1540914064936778 0.7648576304000618 0.8325237485488596 1.3164875922251364 1.012854274240107 0.5785774464567188 0.8269440117534899 0.9160098546099555 0.7568643560792242 1.0902017037071423 1.0 10.164798340686568 DLLEPS(ph)PADQLGNGHR ddPTM_A549_MK2206_60min_R1 2 DLLEPSPADQLGNGHR 16 0 Q86XL3;Q86XL3-3;F5H1D4 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 DLLEPS(1)PADQLGNGHR;DLLEPS(1)PADQLGNGHR 63.037 0.0010683 3412700.0 511.07000000000005 466.02 318.06600000000003 479.15999999999997 621.47 445.88 430.09 287.197 736.38 868.97 877.5799999999999 True False 597.3261215381428 489.7384274676427 363.1725415225977 596.5542215103098 530.0525862563311 493.06272564880993 508.2317858248662 327.90805425392506 569.5911057572239 672.6690734741245 659.6526660241539 0.9055161182601378 0.7424186283053852 0.5505511615855423 0.9043459569501178 0.803532849266045 0.7474580958197111 0.7704536220372932 0.4970919866515303 0.8634712403881465 1.0197322138155265 1.0 9.365562776510481 -9.215584416240523 2.368450263464072 0.9526179088673759 0.7420455835791939 0.38763270357837465 0.12379109556154555 0.20723726096068706 2.4016967303231485 0.024377213549408094 0.022689354157191272 6.08717214501595e-10 9.215584416240523 -0.21057232528818193 DLLES(ph)SSDSDEKVPLAK ddPTM_A549_MK2206_60min_R1 1 DLLESSSDSDEKVPLAK 17 1 P54198 P54198 HIRA Protein HIRA 1 DLLES(0.338)S(0.303)S(0.303)DS(0.055)DEKVPLAK 42.813 0.020068 2404000.0 803.72 1175.9 1172.5 1529.2 1722.4 1371.5 1223.6 1358.6 2325.0 1790.7 1711.2 True False 939.368286932585 1235.7482873250106 1338.778130750367 1903.8540686483957 1469.0372416494836 1516.6312196719803 1445.9122814650561 1551.185710538002 1798.3912122620734 1386.1796263048382 1286.2618132825855 0.7303087732467809 0.9607284260203117 1.0408286376268592 1.4801450598845758 1.142098153330424 1.1790999344071982 1.124119729384671 1.205964209245489 1.3981533103843886 1.077680773844369 1.0 10.328968611838427 -5.614523847679796 1.976946336959899 1.200173678165345 0.7369541980194286 0.5281100646481185 0.1339280158736484 0.2931392656457738 1.9076283034123729 0.022929223171116748 0.1897992500896362 2.429272043842788e-06 5.614523847679796 -0.4632194801459163 DLLESS(ph)SDSDEKVPLAK ddPTM_A549_MK2206_60min_R1 1 DLLESSSDSDEKVPLAK 17 1 P54198 P54198 HIRA Protein HIRA 1 DLLES(0.042)S(0.416)S(0.416)DS(0.127)DEKVPLAK 44.045 0.015709 3003000.0 1248.0 1376.0 1468.5 1708.7 2270.5 1770.4 1452.3 1829.7 2542.0 2314.2 2438.4 True False 1458.6318893294504 1446.0325226288066 1676.7553816690088 2127.3315767064573 1936.5124577131637 1957.742552903591 1716.164111124306 2089.0655782212434 1966.2410587398665 1791.4206127182981 1832.877983583601 0.7958150528261388 0.7889409636540874 0.9148210610237432 1.1606509520874637 1.0565419384475006 1.0681248672515875 0.9363220718974982 1.1397734038666067 1.0727615675188138 0.9773812707465412 1.0 10.839895032166705 -5.98613902900493 4.092917409506579 1.04646310047171 0.7975688351830089 0.7252725261979269 0.06238280171161092 0.07612647311150701 2.960366313189007 0.008313890548331817 0.026592295288728297 1.0324308447790534e-06 5.98613902900493 -0.24889426528870107 DLLESS(ph)SDSDEKVPLAK ddPTM_A549_PD325901_60min_R1 1 DLLESSSDSDEKVPLAK 17 1 P54198 P54198 HIRA Protein HIRA 1 DLLES(0.079)S(0.46)S(0.46)DS(0.001)DEKVPLAK 141.6 9.952799999999999e-17 4370400.0 2357.6 2703.7 2500.7 2371.0 3044.5 2577.2 2991.8 2852.1 2470.7 2094.9 2898.7 True False 2596.94181642661 2931.550287635976 2670.4125399307004 2517.451285068309 2830.664822954818 2556.212137667935 3105.6545861757786 2795.2126280708335 2366.865071090692 1962.6276564821283 2542.17827637326 1.0215419746767238 1.1531647150325761 1.0504426714480397 0.9902733055605262 1.1134800612776539 1.005520408000141 1.2216509813805778 1.0995344638294051 0.9310381939331671 0.7720259726560428 1.0 11.311849491016394 -8.755297302783461 24.94295788081922 0.9674347010885309 1.08337860517713 0.4052849181612751 0.08809359127595902 105.8477872024173 429847.51949996216 0.011142472002021696 0.012476242459464548 1.756720612868136e-09 8.755297302783461 0.115943904088599 DLLHNEDRHDDYFQER ddPTM_A549_MK2206_60min_R1 2 DLLHNEDRHDDYFQER 16 1 Q8N684-2;Q8N684;Q8N684-3 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 0 ; 101.2 2.8223e-06 5323600.0 152.5 95.859 139.79 98.29799999999999 406.73 276.33 113.88 0.0 296.27 291.44 253.652 False True 178.23827173296561 100.73781365310667 159.61432400647652 122.38101441276486 346.9005557919732 305.5710571869912 134.57052191340364 0.0 229.16531804597173 225.60350158612934 190.66320796093652 0.9348330684202243 0.528354760892023 0.8371532489853976 0.6418701107653583 1.8194415141858251 1.6026744774461008 0.70580225389355 0.0 1.2019378069675803 1.1832566125308845 1.0 7.574882665238019 DLLHPS(ph)PEEEK ddPTM_A549_MK2206_60min_R1 2 DLLHPSPEEEK 11 0 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEK;DLLHPS(1)PEEEK 129.34 1.0376e-07 11443700.0 3519.3 3733.9 3082.2 3190.1 4962.0 4219.700000000001 3365.3999999999996 4142.4 5179.0 5286.700000000001 4809.700000000001 True False 4113.271801375907 3923.939561223622 3519.3023066940527 3971.674643209031 4232.096373121655 4666.225853189834 3976.849617556799 4729.597885567949 4005.9647691635614 4092.430798227392 3615.3187490329897 1.1377342046191936 1.0853647585771464 0.9734417767825814 1.0985683196734335 1.170601174309634 1.2906817288068824 1.0999997216346442 1.3082104826394634 1.1080529953921934 1.1319695668112302 1.0 11.819907134432292 -9.973075308929188 1.0961542563604416 1.0155083508957945 1.1400431238987558 0.03625314863009088 0.09591516984386188 0.48091425795464393 1.1669661001887455 0.031269464483308904 0.017709126604461334 1.063958506270689e-10 9.973075308929188 0.12453477300296134 DLLHPS(ph)PEEEK ddPTM_A549_PD325901_60min_R1 2 DLLHPSPEEEK 11 0 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEK;DLLHPS(1)PEEEK 186.58 9.8697e-19 16390000.0 10005.4 10765.0 10088.5 9524.900000000001 12114.9 10520.900000000001 9292.7 9632.7 9956.3 10622.7 11741.2 True False 11021.140842413815 11672.204329770793 10773.166277078766 10113.231440382591 11263.991218136089 10435.221278593279 9646.338783660554 9440.568241793038 9537.871334965897 9951.980909118674 10297.10683359911 1.0703143145463159 1.133542121917662 1.04623234964663 0.9821430042255618 1.093898645528477 1.0134129369759968 0.9368008839322594 0.9168175483028674 0.9262671048380452 0.9664832141631957 1.0 13.32995142150745 -7.538256574249862 4.337563756837551 0.9581746712280973 1.0630371061939308 0.6495844388403713 0.040320089765825344 0.12327060046200854 5.58578760585116 0.007159934171321799 0.011038075981359302 2.8956323888669347e-08 7.538256574249862 0.10486243496583347 DLLHPS(ph)PEEEKR ddPTM_A549_MK2206_60min_R1 8 DLLHPSPEEEKR 12 1 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR 100.11 5.4348e-05 107233800.0 11632.720000000001 12826.330000000002 11252.27 10713.57 15588.18 13046.11 11445.15 12333.48 17715.34 17399.6 16546.3 True False 13596.038743301664 13479.135411315085 12848.011085115924 13338.39513095044 13295.179371537184 14426.640700893062 13524.585606578781 14081.788559698382 13702.843775584857 13469.018275452989 12437.39705535159 1.0931578917030338 1.0837585510318055 1.0330144666071952 1.072442655934279 1.0689679932519727 1.1599405114019044 1.0874128683348092 1.1322134765842535 1.1017453020597077 1.0829451062396942 1.0 13.602396964031996 -10.652615650046197 0.942605727147225 1.00047459876901 1.0920573902790212 0.08031031262348087 0.03934121301782184 0.35998646757404823 0.5741653049134624 0.02186617203286932 0.005974047589695615 2.2252783874419706e-11 10.652615650046197 0.09158279151001114 DLLHPS(ph)PEEEKR ddPTM_A549_PD325901_60min_R1 4 DLLHPSPEEEKR 12 1 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR 162.41 9.0389e-15 148244000.0 12455.5 16125.0 14183.5 17077.8 16951.6 14554.9 15405.1 15660.6 15318.0 16522.8 18468.8 True False 13719.973190745526 17483.91034069242 15146.077602314193 18132.65691950212 15760.978095845261 14436.36972006171 15991.349510494172 15348.237047496967 14674.237729779905 15479.547588201314 16197.254683369252 0.8470554707541083 1.0794366503753414 0.9351015279068021 1.1194895230066406 0.9730647818996176 0.8912849740446722 0.9872876498579419 0.9475826211003506 0.9059706732182754 0.955689583870972 1.0 13.983461687083983 -6.994053521561127 24.99922427026406 0.9517031539970475 1.0031463627013004 0.08078067001956812 0.07244052946152517 289.89982336466784 1218735.8673318627 0.01001770432287438 0.01889479197835345 1.0137864410763518e-07 6.994053521561127 0.051443208704252896 DLLHPS(ph)PEEEKRK ddPTM_A549_MK2206_60min_R1 6 DLLHPSPEEEKRK 13 2 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK 87.148 4.0048e-05 155364000.0 10668.89 12047.49 11875.939999999999 9582.33 14716.12 11457.28 10944.47 10328.43 16387.8 16806.5 18019.600000000002 True False 12469.53780268275 12660.655782009684 13560.126869171434 11930.001280167135 12551.39824232628 12669.68176487306 12932.93853148567 11792.516581990289 12675.989465939092 13009.899977378825 13544.836004340174 0.9206119438202968 0.9347219691661699 1.00112890734346 0.8807785695112442 0.9266556079604386 0.9353883473239035 0.9548242981562542 0.8706282289583729 0.9358540377954612 0.9605062751007145 1.0 13.725455305598977 -10.342561589258443 0.8677412985716275 0.9975202211876161 0.9297258126196678 0.22001354980681842 0.03460114304854256 0.44373956095733447 0.6370237887032436 0.017262984119505435 0.006159990078136719 4.544000921143214e-11 10.342561589258443 -0.06779440856794827 DLLHPS(ph)PEEEKRK ddPTM_A549_PD325901_60min_R1 4 DLLHPSPEEEKRK 13 2 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK 129.93 9.242299999999999e-09 289733000.0 17862.4 17420.899999999998 18209.4 17624.6 20042.8 21283.5 19225.2 20074.6 20586.8 19010.1 22071.3 True False 19675.777698396127 18889.020381653863 19445.199386017564 18713.231513629235 18635.06287190632 21110.174232521942 19956.825506433102 19674.19635478096 19721.608388525452 17809.79904171604 19356.670021498318 1.016485670135586 0.9758403878701728 1.0045735844244348 0.9667588222997833 0.9627204912420085 1.0905891462258803 1.03100509975467 1.0164039751119374 1.0188533650995661 0.9200858940063421 1.0 14.240543162911873 DLLNELES(ph)PKEEPIEE ddPTM_A549_PD325901_60min_R1 2 DLLNELESPKEEPIEE 16 1 Q9BZH6 Q9BZH6 WDR11 WD repeat-containing protein 11 1 DLLNELES(1)PKEEPIEE;DLLNELES(1)PKEEPIEE 98.694 2.2948e-06 3094400.0 1688.02 1723.76 1364.1200000000001 1731.25 2651.8 1926.81 1953.02 2336.1 1926.46 2070.7799999999997 2166.3999999999996 True False 1859.3865477453555 1869.027304736245 1456.697386319939 1838.1853805459743 2465.5467162133637 1911.1186981918188 2027.3432448335504 2289.504652865002 1845.4975856451088 1940.030597398475 1899.9465339410888 0.9786520381120415 0.983726263527686 0.7667044099911006 0.9674932150501087 1.2976926835404372 1.005880251918224 1.0670527873372313 1.205036358636812 0.971341852350426 1.0210974691873247 1.0 10.89174310516391 -6.524639376208329 24.998253045820228 1.032486934654197 0.9087643128015563 0.2612806898286151 0.11185158706815806 73.21010808188234 1039473.275983891 0.01672323507745421 0.03500670290474231 2.9878626115376854e-07 6.524639376208329 -0.1237226218526406 DLLPS(ph)PAGPVPSKDPK ddPTM_A549_MK2206_60min_R1 2 DLLPSPAGPVPSKDPK 16 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 DLLPS(1)PAGPVPSKDPK;DLLPS(1)PAGPVPSKDPK 97.384 1.1136e-06 12351200.0 4177.5 4482.6 3928.0 4143.0 5737.5 4904.2 3928.4 4289.700000000001 6918.200000000001 6121.3 6953.9 True False 4882.5598699309085 4710.74519326736 4485.049464893336 5158.03518598634 4893.521350420291 5423.1591888555095 4642.139429966761 4897.778111655282 5351.2387460952605 4738.4940785725175 5227.054712123524 0.9340938901225577 0.9012236245282366 0.8580452495534061 0.9867957138506507 0.936190956461649 1.0375172037662328 0.888098496309954 0.9370053273587277 1.0237579365074765 0.9065323283458563 1.0 12.351782544877471 -7.259696143533907 0.40272570769189886 1.0129055796568633 0.8914543143655352 0.0 0.056709186350349175 1.187740041207371 0.3439552457230321 0.016055567627924927 0.05620283022727595 5.4992549761698216e-08 7.259696143533907 -0.1214512652913281 DLLPS(ph)PAGPVPSKDPK ddPTM_A549_PD325901_60min_R1 1 DLLPSPAGPVPSKDPK 16 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 DLLPS(0.998)PAGPVPS(0.002)KDPK 86.539 2.87e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DLLPSGSRDEPPPASQSTSQDCSQALKQS(ph)P ddPTM_A549_MK2206_60min_R1 2 DLLPSGSRDEPPPASQSTSQDCSQALKQSP 30 2 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 DLLPSGSRDEPPPASQSTSQDCSQALKQS(1)P;DLLPSGSRDEPPPASQSTSQDCSQALKQS(1)P 203.46 3.3601999999999993e-78 65114000.0 2706.3 2935.55 2490.28 2210.21 3494.0 2845.54 3000.6 3091.56 4752.5 4498.1 4507.5 True False 3163.057277317539 3084.9569562521756 2843.439150059722 2751.7115492200955 2980.0372284738132 3146.6531540834208 3545.770179604485 3529.798097505421 3676.0663381830104 3481.9760859338758 3388.1633493286913 0.9335610332790616 0.9105101018412849 0.8392272912765858 0.8121543342251494 0.8795435524276769 0.9287194357694939 1.0465168924948736 1.0418028098334728 1.0849731725335388 1.027688374772064 1.0 11.72628771588045 -7.613183177329105 2.837492035484519 1.0421192811835966 0.872333650085349 0.8297950298069068 0.035781288025366884 0.0940473651052882 1.535229354305536 0.006901861119965178 0.010680366689609738 2.4367828119518554e-08 7.613183177329105 -0.16978563109824762 DLLPSGSRDEPPPASQSTSQDCSQALKQS(ph)P ddPTM_A549_PD325901_60min_R1 2 DLLPSGSRDEPPPASQSTSQDCSQALKQSP 30 2 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 DLLPSGSRDEPPPASQSTSQDCSQALKQS(1)P;DLLPSGSRDEPPPASQSTSQDCSQALKQS(1)P 221.47 1.1926999999999997e-104 74921000.0 4376.3 4574.5 4366.0 4939.5 5685.2 5629.3 4940.5 5901.3 4839.8 6037.200000000001 5953.6 True False 4820.5787543382185 4960.009169209144 4662.30301489081 5244.601696581572 5285.891164875261 5583.456847188467 5128.513431045333 5783.59394201971 4636.400036857862 5656.010161685005 5221.344942979902 0.9232446442404627 0.9499485713691213 0.8929314316150049 1.0044541691567301 1.0123619915175575 1.06935222785758 0.9822207663067002 1.1076827915374088 0.8879704534923519 1.0832477500436952 1.0 12.350205756714685 -6.264102146152158 24.881248908656488 0.9764875313419147 0.9248322528291959 0.11121971467675662 0.06699721548019483 419.1908629337657 3916998.626140916 0.00994321794275885 0.024128766223141713 5.443746007651435e-07 6.264102146152158 -0.05165527851271878 DLLSDLQDIS(ph)DSER ddPTM_A549_MK2206_60min_R1 4 DLLSDLQDISDSER 14 0 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;J3KS35;E7ESP2;Q9UQ88-9;P21127-10;P21127-5;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(1)DSER;DLLSDLQDIS(0.924)DS(0.076)ER;DLLSDLQDIS(1)DSER;DLLS(0.002)DLQDIS(0.869)DS(0.129)ER 272.16 4.852699999999999e-84 29221630.0 5803.06 6642.74 5485.25 5418.07 8288.95 7061.07 6111.700000000001 5989.17 8871.52 7704.3099999999995 8064.77 True False 6782.474656804617 6980.827092563428 6263.140931086094 6745.4973932264065 7069.6564353056665 7808.267740641072 7222.116778873805 6838.153188563881 6862.134884906338 5963.901020124324 6062.065032671229 1.1188389798279583 1.1515592549635432 1.0331695383225312 1.1127391997399976 1.1662125690179943 1.2880541034381454 1.1913624713609188 1.1280237265205766 1.1319797540810215 0.9838068361164297 1.0 12.565593613823099 -10.303701274063503 0.7430448768674079 1.001357768139327 1.1490734495364205 0.5002440271950717 0.059222344746191966 0.5033384143684809 0.5172818435299007 0.040364492519369695 0.0130490578334106 4.969340159528463e-11 10.303701274063503 0.14771568139709346 DLLSDLQDIS(ph)DSER ddPTM_A549_PD325901_60min_R1 2 DLLSDLQDISDSER 14 0 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;J3KS35;E7ESP2;Q9UQ88-9;P21127-10;P21127-5;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(0.986)DS(0.014)ER;DLLSDLQDIS(1)DSER 238.07 2.2874e-57 116489000.0 3030.3 3113.9100000000003 3359.2200000000003 3388.04 4240.7 2853.26 3401.7 3149.7 3078.62 3895.18 3989.1 True False 3337.933825211045 3376.3301239680954 3587.19686983085 3597.3115360028787 3942.847861620787 2830.0239965553374 3531.153554981665 3086.8767626081512 2949.2363075894377 3649.2376700444242 3498.465988988364 0.9541135559749319 0.9650887373481123 1.0253627964718741 1.0282539682608427 1.1270219216168293 0.8089328309787808 1.009343399677512 0.8823515141562859 0.8430084262280495 1.0430965118799562 1.0 11.772506750944931 -7.260767483551471 24.999998445913 0.9201610392942419 1.0176793535268165 0.2337340157889437 0.078698350862821 65.4298152400671 2434498.3594973125 0.011789056473270075 0.019660359670330443 5.485705849199576e-08 7.260767483551471 0.09751831423257462 DLLSDLQDIS(ph)DSERK ddPTM_A549_MK2206_60min_R1 1 DLLSDLQDISDSERK 15 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;J3KS35;E7ESP2;Q9UQ88-9;P21127-10;P21127-5;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(0.957)DS(0.043)ERK 66.12 0.0014554 1802800.0 337.78 740.23 736.42 537.64 996.66 754.35 614.66 547.01 1015.2 723.67 975.75 True False 394.7890060718761 777.9045452220362 840.8554294645498 669.3618241355767 850.0526342675188 834.1748163029962 726.3357657120891 624.5503426478672 785.258820941272 560.1924443893572 733.4443456699881 0.5382671615134527 1.060618368407264 1.146447490431525 0.9126279697802112 1.158987235072364 1.1373389422492481 0.9903079490627126 0.8515306530550069 1.0706454083083186 0.7637831659573727 1.0 9.518543686999697 -5.259640520936644 24.884890704435144 1.0350380256458156 0.5382669835249757 0.5406942750442814 0.12270808640329876 58.46881735620695 808768.5929979036 0.012074068954115941 0.10730137990475447 5.4999593425535995e-06 5.259640520936644 -0.4967710421208399 DLLSDLQDIS(ph)DSERK ddPTM_A549_PD325901_60min_R1 1 DLLSDLQDISDSERK 15 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;J3KS35;E7ESP2;Q9UQ88-9;P21127-10;P21127-5;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(0.846)DS(0.154)ERK 114.34 4.6771e-07 2758500.0 891.55 744.79 1044.3 908.52 868.99 867.59 903.93 1035.4 1310.2 1201.4 1238.8 True False 982.0594996755796 807.5560671407318 1115.1724778860441 964.6372170013739 807.9551402527535 860.5246346885474 938.3295507994756 1014.7481347444134 1255.136850343232 1125.543398967793 1086.4354534002123 0.9039280673343568 0.7433079108504118 1.026450742559895 0.8878918798004548 0.743675234201995 0.7920623650446671 0.8636772188009786 0.9340160352541521 1.1552797236274237 1.035996566059387 1.0 10.085386749263575 -8.555490179259364 4.37172561906303 1.0731138112513048 0.8512962616206592 0.5542987002067581 0.0829401134915352 0.11446753713302785 5.039406819566207 0.01564225015081772 0.0180297026408605 2.782978304882706e-09 8.555490179259364 -0.2218175496306456 DLLSLGS(ph)PRPLPVR ddPTM_A549_PD325901_60min_R1 1 DLLSLGSPRPLPVR 14 1 B1ALC3;A0A1W2PPS5;Q96FN5 B1ALC3 KIF12 Kinesin-like protein;Kinesin-like protein KIF12 1 DLLS(0.476)LGS(0.524)PRPLPVR 52.026 0.006321 1092100.0 259.85 165.48 204.33 0.0 167.96 189.82 149.38 134.59 259.8 338.94 289.43 True False 286.22978070854066 179.4255803521105 218.19706253610593 0.0 156.163069030544 188.2741688546204 155.06473764387252 131.90549686618758 248.88150947883656 317.5392705561377 253.83194484793628 1.1276349825866598 0.7068676106137839 0.8596123024106432 0.0 0.6152222846659312 0.7417276378172584 0.6108952824545686 0.5196568026345483 0.9804971932430908 1.25098230148442 1.0 7.987729834105695 -8.774840745691817 24.191499797308705 0.9907904194555459 0.6359725405767216 0.32281090348725916 0.26881853279044526 144.92160730998475 261604.42846420786 0.043939697098449054 0.046918909796259706 1.679419742726545e-09 8.774840745691817 -0.3548178788788243 DLLVSSGSNNSLPCGS(ph)PK ddPTM_A549_PD325901_60min_R1 1 DLLVSSGSNNSLPCGSPK 18 0 Q5THK1-3;Q5THK1-2;Q5THK1-4;Q5THK1 Q5THK1-3 PRR14L Protein PRR14L 1 DLLVSSGSNNSLPCGS(1)PK 184.99 1.0081e-39 2299800.0 1163.6 1527.2 1317.9 1488.4 1322.5 1567.7 1620.1 1699.4 1633.4 1904.4 1817.3 True False 1281.7278154029536 1655.9025037088668 1407.3406191765 1580.3350875983417 1229.612162377318 1554.9331709692785 1681.7537920527363 1665.5041338464903 1564.753878301507 1784.1558589930637 1593.7836208138563 0.8042044093466382 1.0389757317641963 0.8830186236057878 0.9915618826546561 0.7715050815677374 0.975623761383155 1.055195805810803 1.0450001569196767 0.9817856438394533 1.1194467277069864 1.0 10.638240060559742 -7.505344644103789 24.79272649702207 1.0010554215775491 0.9064241121050357 0.3681690191846103 0.08161409289996202 637.4792016675135 901378.0417623438 0.010097145674250105 0.015935488614277623 3.123599580968766e-08 7.505344644103789 -0.09463130947251341 DLNES(ph)PVK ddPTM_A549_MK2206_60min_R1 2 DLNESPVK 8 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 DLNES(1)PVK;DLNES(1)PVK 157.25 0.00035817 177740000.0 33381.0 33228.0 33209.0 30128.0 45930.0 39265.0 36959.0 39711.0 48129.0 45893.0 47036.0 True False 39014.896712905764 34919.1632717369 37918.53555999053 37509.361352497326 39173.75784310308 43419.99623800243 43673.97189495508 45340.15585983702 37227.858346219924 35525.73942592725 35355.66307244023 1.1034978083417113 0.9876540343817345 1.0724883162931842 1.0609152280822562 1.1079910384607963 1.2280916963440676 1.2352751468830174 1.2824015142055054 1.0529531936635936 1.004810441629635 1.0 15.109653695918533 -8.979665205356902 21.299692659465574 1.023361080447476 1.133209851402409 0.28745658789316897 0.08212341872974564 29.08463549422435 30466.30882946323 0.016315782680769126 0.016696034809099543 1.0479360835021654e-09 8.979665205356902 0.10984877095493295 DLNES(ph)PVK ddPTM_A549_PD325901_60min_R1 2 DLNESPVK 8 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 DLNES(1)PVK;DLNES(1)PVK 139.31 0.0010638 262090000.0 31417.0 30421.0 28705.0 28883.0 36383.0 27033.0 30516.0 26870.0 30324.0 30454.0 33563.0 True False 34606.43071202698 32984.684432508766 30653.093917187492 30667.03731194769 33827.583594536074 26812.85221076259 31677.303078995952 26334.056770892796 29049.58773455059 28531.129242687846 29434.963773386604 1.1756912961896056 1.1205953805973974 1.0413837826735242 1.0418574844544248 1.1492313649497685 0.9109184715561031 1.0761794484570333 0.8946522568749525 0.9869075415956704 0.9692938459969856 1.0 14.845243231627233 -4.8267748685648835 0.4395847580246084 0.9873061039345572 1.3842312161838484 0.49338535107489423 0.06252062145583 4.044916815237871 0.3944826812512093 0.012307290217075719 0.9077319205294915 1.4901333392372977e-05 4.8267748685648835 0.39692511224929117 DLPAEDS(ph)RGR ddPTM_A549_MK2206_60min_R1 2 DLPAEDSRGR 10 1 Q86UN3 Q86UN3 RTN4RL2 Reticulon-4 receptor-like 2 1 DLPAEDS(1)RGR;DLPAEDS(1)RGR 78.692 0.00036614 7400000.0 1061.01 923.2 1183.69 814.72 966.3599999999999 691.38 672.19 1050.06 1323.42 1099.73 1429.6 True False 1240.0825487960258 970.1869366939786 1351.5550410131352 1014.326436574171 824.2097241293508 764.541372699099 794.3182220317066 1198.9092206738803 1023.6674830674726 851.3002292043444 1074.5908650472102 1.1540043649464162 0.9028430896361243 1.257739187047488 0.9439187225266505 0.7669986326313509 0.7114720565445253 0.7391819974170445 1.1156890121350589 0.9526113764446524 0.7922086971835035 1.0 10.069571763714874 -6.476638217402018 24.885334626598233 0.9337831227814213 1.0873551666504493 0.26475797554089875 0.14786316138967046 543.03551441884 292245.71303180227 0.020954944594849242 0.0486933100840084 3.3370428442972396e-07 6.476638217402018 0.153572043869028 DLPAEDS(ph)RGR ddPTM_A549_PD325901_60min_R1 2 DLPAEDSRGR 10 1 Q86UN3 Q86UN3 RTN4RL2 Reticulon-4 receptor-like 2 1 DLPAEDS(1)RGR;DLPAEDS(1)RGR 89.301 0.00019121 8740000.0 1105.3600000000001 1256.83 1259.46 1384.27 1525.03 1192.69 968.09 1417.06 1090.4499999999998 1368.01 1452.72 True False 1217.5753334769759 1362.7474749452683 1344.9345293482313 1469.773213994731 1417.9171538678886 1182.9771280751092 1004.9311947091742 1388.795626637936 1044.622178642022 1281.6336151339535 1274.0446495508204 0.9556771294524462 1.0696230115841867 1.0556415976648887 1.1536277119588525 1.1129257945298794 0.9285209340914244 0.7887723519450238 1.0900682539874662 0.8199258785869992 1.005956593111402 1.0 10.315200123132904 -7.284186307458803 12.81003618718508 0.9179013530586203 1.0734080206834562 0.3209562447615867 0.0918046113689284 1.4789661045268199 832.3142956438362 0.014320008367357702 0.023007837495091093 5.197729719276808e-08 7.284186307458803 0.1555066676248359 DLPAIQES(ph)PTR ddPTM_A549_MK2206_60min_R1 2 DLPAIQESPTR 11 0 P49796-1;P49796-4;P49796-6;P49796 P49796-1 RGS3 Regulator of G-protein signaling 3 1 DLPAIQES(0.94)PT(0.06)R;DLPAIQES(0.803)PT(0.197)R 105.95 0.00016598 12406500.0 2474.5 3023.3999999999996 2391.1 2442.9300000000003 4402.1 3130.5 2901.0 3194.3 4312.9 4111.8 4358.1 True False 2892.135104283433 3177.278146014485 2730.193934701238 3041.4479596672973 3754.5569214266097 3461.767432142282 3428.0741488477693 3647.1018071334734 3336.0350362860618 3182.9415242308773 3275.863492558928 0.8828619113259365 0.969905538869865 0.8334272599889556 0.9284416052670992 1.1461274042569314 1.0567495990005784 1.0464642854119488 1.113325330990686 1.018368147471289 0.9716343588372588 1.0 11.677659524818205 -6.544946432331856 24.81945506936966 1.0316617731411912 0.8991965297709036 0.6028507672141947 0.056403167358271215 120.21504534233726 135205.0892547085 0.00802339941681461 0.016703049724049616 2.851369945514757e-07 6.544946432331856 -0.13246524337028764 DLPAIQES(ph)PTR ddPTM_A549_PD325901_60min_R1 1 DLPAIQESPTR 11 0 P49796-1;P49796-4;P49796-6;P49796 P49796-1 RGS3 Regulator of G-protein signaling 3 1 DLPAIQES(0.986)PT(0.014)R 83.615 0.00059171 8430300.0 3576.4 3806.5 3491.5 3036.0 3463.8 3747.4 3459.1 3447.1 3507.4 4238.6 4082.3 True False 3939.4734951934724 4127.287113912914 3728.4541860951126 3223.5268247437293 3220.514637461289 3716.882416846509 3590.737943392152 3378.344886302365 3359.996175312053 3970.9740726359983 3580.202979831841 1.1003492029322053 1.1528081332714741 1.0414086036737042 0.9003754376225718 0.8995340922297523 1.0381764491523573 1.002942560413378 0.9436182544211622 0.9384932067370854 1.109147748048216 1.0 11.805825668155922 -5.9806612298405755 4.705582574635063 0.9665782073195608 1.1234911113377406 0.4647561403434364 0.06001900046286827 0.08209151720742976 4.694093178697462 0.0062282137908756165 0.01960800563715389 1.0455354681429568e-06 5.9806612298405755 0.1569129040181798 DLPAIQES(ph)PTRDLPPCQDLPPSQVSLPAK ddPTM_A549_PD325901_60min_R1 2 DLPAIQESPTRDLPPCQDLPPSQVSLPAK 29 1 P49796-1;P49796-4;P49796-6;P49796 P49796-1 RGS3 Regulator of G-protein signaling 3 1 DLPAIQES(0.97)PT(0.03)RDLPPCQDLPPSQVSLPAK;DLPAIQES(0.961)PT(0.039)RDLPPCQDLPPSQVSLPAK 111.61 1.1013e-15 7228900.0 1475.98 1863.37 1534.73 1647.63 2168.5 2072.58 1947.3700000000001 2301.9 1566.46 2026.58 2029.9 True False 1625.8204030409518 2020.4027293975842 1638.8860068812112 1749.4003630607738 2016.1920409188765 2055.701595641708 2021.4782309917516 2255.986798694383 1500.627133711387 1898.6213929416942 1780.2351685962958 0.9132615913452046 1.1349077723201362 0.9206008485797202 0.9826793638955942 1.1325425294842542 1.1547359764062046 1.1355119068823218 1.2672408895692218 0.84293758497908 1.0665003289642598 1.0 10.797852118077069 -8.790381504320884 24.999992027897626 0.9258316459289806 1.0795141860279518 0.12580247655616383 0.11455304286974909 201.8599999158128 174364.2708600398 0.01995888074813171 0.02124959636320886 1.6203860500691333e-09 8.790381504320884 0.1536825400989712 DLPEHAVLK ddPTM_A549_MK2206_60min_R1 2 DLPEHAVLK 9 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 81.594 0.0016989000000000001 13584900.0 1787.48 2211.56 2116.0 1777.1100000000001 2839.0 1651.9099999999999 2242.5 2195.0 2704.1000000000004 2524.2 2779.1000000000004 False True 2089.162924309779 2324.118957663492 2416.0806180535405 2212.5020297775 2421.3868608005578 1826.7140197508866 2649.933222609833 2506.1479719055733 2091.6256675603754 1953.9814668669621 2088.972770741955 1.0000910273080086 1.1125654628987904 1.156587894247853 1.059133972814624 1.1591280148379037 0.8744556393150494 1.2685341138595299 1.1997035131364815 1.0012699527995657 0.9353790983943523 1.0 11.028577972006518 -8.855286642393212 15.50934340512259 1.0005670408103418 1.1040307980306199 0.2257828251462598 0.10084159373701108 1.3580371799396265 219.8959478531074 0.01635926819042505 0.01741397241032657 1.3954470361817275e-09 8.855286642393212 0.10346375722027812 DLPEHAVLK ddPTM_A549_PD325901_60min_R1 2 DLPEHAVLK 9 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 113.22 0.00026512 16743600.0 3106.6000000000004 2718.7 2906.2 3533.3 3922.7 3508.2 3548.3999999999996 3835.3 3773.7 3586.6000000000004 3542.2 False True 3421.979745041954 2947.8143902784786 3103.432208400291 3751.5439162934867 3647.183084580344 3479.630382340002 3683.436303758983 3758.8019327653565 3615.104512395248 3360.1414639070167 3106.531855855855 1.1015434265035704 0.9489084699781231 0.9990022161048433 1.2076309178100895 1.174036917633841 1.12010130389645 1.185706915194079 1.2099672905912628 1.163710748879245 1.0816375365902344 1.0 11.60108913309896 -6.221674689179868 24.756239391106988 1.1130167243893185 1.0097270286714999 0.33008043150506217 0.07133803779187253 594.6061271892246 370182.19576665835 0.012659386199756904 0.03349308257238071 6.002405215757802e-07 6.221674689179868 -0.10328969571781865 DLPFSRPQLRVS(ph)PATPK ddPTM_A549_PD325901_60min_R1 2 DLPFSRPQLRVSPATPK 17 2 J3KNZ9;Q9HAH7;Q9HAH7-1 J3KNZ9 FBRS Probable fibrosin-1 1 DLPFS(0.013)RPQLRVS(0.978)PAT(0.009)PK;DLPFS(0.002)RPQLRVS(0.943)PAT(0.054)PK 54.117 0.0027125 9403400.0 2842.3 2164.67 2487.0 3297.6000000000004 3199.5 3758.6 2897.8999999999996 3139.0 3548.0 3386.3 3564.1 True False 3130.8482036093296 2347.094337810024 2655.782775545909 3501.285262607023 2974.7781576757898 3727.9912077598574 3008.1811702917275 3076.3901825021385 3398.889898502355 3172.4884400904284 3125.7382946913913 1.00163478462884 0.7508927864486352 0.8496497547655756 1.120146644571442 0.9517041662534623 1.1926754117871303 0.9623906055733081 0.9842123340034374 1.0873878674599444 1.014956512987167 1.0 11.609981277089146 -6.2465475975961935 24.304731041663654 1.041024135309587 0.8557424406166951 0.43380581050722655 0.08711257179613822 346.14506274988685 564938.0495857865 0.01110218228194006 0.029230260216106443 5.668294450199344e-07 6.2465475975961935 -0.1852816946928919 DLPPFGINS(ph)PQALK ddPTM_A549_PD325901_60min_R1 2 DLPPFGINSPQALK 14 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 DLPPFGINS(1)PQALK;DLPPFGINS(1)PQALK 67.115 0.0039 3240800.0 3935.8 4170.4 3918.8999999999996 5145.6 4972.2 4438.5 4164.200000000001 4905.0 4527.3 5253.4 4608.1 True False 4335.359518617176 4521.8542440200745 4184.8601202600985 5463.4320254945105 4622.9698251587915 4402.354327579985 4322.670909737676 4807.165927101938 4337.03332510984 4921.699427449145 4041.3329131526625 1.0727548588010638 1.1189016943651284 1.0355148190440637 1.3518886325136876 1.1439220486174675 1.0893322629403692 1.0696151499099193 1.1895001056351593 1.073169030691535 1.2178406315973866 1.0 11.980615486065004 -9.470850834435238 0.6770398258425375 1.00683558852739 1.1380963407048321 0.0 0.10276961246409529 0.5926424609218394 0.5949817346843345 0.03172900232626915 0.019628710156112183 3.381809700631014e-10 9.470850834435238 0.13126075217744204 DLPPFGINS(ph)PQALKK ddPTM_A549_MK2206_60min_R1 2 DLPPFGINSPQALKK 15 1 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 DLPPFGINS(1)PQALKK;DLPPFGINS(1)PQALKK 107.57 1.7236000000000001e-06 10631100.0 6590.299999999999 6719.9 7043.799999999999 6789.299999999999 10024.599999999999 8269.5 7227.9 8051.200000000001 10214.9 10285.8 10838.2 True False 7702.581522634513 7061.914206986425 8042.716756826807 8452.67880478326 8549.994619507319 9144.573001150162 8541.115870546977 9192.482255765904 7901.241459843378 7962.230636201648 8146.775820897222 0.9454760621836052 0.8668354650034645 0.9872269636039949 1.037548963002194 1.0494942793903577 1.1224775545797516 1.0484044311908323 1.128358317186825 0.9698611614641431 0.9773474576013006 1.0 12.992013494002792 -5.915452899818577 5.378506977812865 1.0170993219053068 0.9074170003414762 0.43106456367685464 0.054940836175304444 0.17713724867858188 8.502832330197117 0.00866059862244358 0.027939209564455024 1.2149183738674708e-06 5.915452899818577 -0.10968232156383062 DLPPFGINS(ph)PQALKK ddPTM_A549_PD325901_60min_R1 2 DLPPFGINSPQALKK 15 1 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 DLPPFGINS(1)PQALKK;DLPPFGINS(1)PQALKK 118.53 3.1476999999999995e-07 21775000.0 13043.099999999999 11875.3 12807.8 13422.9 16663.0 14887.5 14109.599999999999 14250.5 15457.7 14849.4 15670.0 True False 14367.225910177265 12876.07320736897 13677.014327558056 14252.002047382271 15492.648364229311 14766.261135934892 14646.548549069377 13966.26259819902 14808.066624599734 13911.806349785546 13742.689340314271 1.0454450038414906 0.9369398440519879 0.9952210945667267 1.0370606287063426 1.1273374505222586 1.07448118561612 1.065770184159197 1.0162685230196462 1.0775232021843186 1.012305961757803 1.0 13.746376735836217 -6.264464214401511 4.609917468007788 1.0473354962227928 0.9861276121354208 0.282044454603118 0.04138525280749553 0.20636842822767873 12.14647662338156 0.006347873970617762 0.016313184648904036 5.439209486259351e-07 6.264464214401511 -0.06120788408737199 DLPPT(ph)AMPK ddPTM_A549_MK2206_60min_R1 1 DLPPTAMPK 9 0 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 DLPPT(1)AMPK 49.368 0.021083 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DLPS(ph)PDSR ddPTM_A549_MK2206_60min_R1 2 DLPSPDSR 8 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 DLPS(0.999)PDS(0.001)R;DLPS(0.996)PDS(0.004)R 109.02 0.0017048999999999999 80317000.0 7296.3 8509.9 7205.4 7143.6 10839.0 8666.3 7368.3 7571.4 10749.5 11427.099999999999 11268.7 True False 8527.737062591721 8943.017561278259 8227.23406678779 8893.782320688386 9244.597458336471 9583.362113775642 8707.024733179947 8644.669136440029 8314.755413424153 8845.710173534379 8470.370789701661 1.0067725810728152 1.0558000096231024 0.9712956222401176 1.0499873667279727 1.0914041058953547 1.1313981821701553 1.0279390299850877 1.0205774163924772 0.9816282686860996 1.044312036999497 1.0 13.0482094094445 -8.404015913787223 2.5883365017977797 0.991572738070165 1.0504402751833224 0.11295981483011441 0.042503938729145804 0.2720223043382083 3.5577920040093907 0.007088753917679837 0.008641172089781383 3.944428483006451e-09 8.404015913787223 0.0588675371131574 DLPS(ph)PDSR ddPTM_A549_PD325901_60min_R1 2 DLPSPDSR 8 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 DLPS(0.998)PDS(0.002)R;DLPS(0.997)PDS(0.003)R 118.21 0.0012478 96087000.0 6651.7 5926.1 7210.6 7086.6 8459.0 7886.099999999999 7434.0 7722.8 8519.2 7882.3 8869.0 True False 7326.975687277272 6425.513244649758 7699.954676860206 7524.323187163672 7864.869021965771 7821.878216228126 7716.904938040893 7568.762695580602 8161.167650316025 7384.610232798268 7778.169225223184 0.9419923217300579 0.8260958406269937 0.9899443498722883 0.9673642947705051 1.0111465557295198 1.0056194445941342 0.9921235594896004 0.9730776583050527 1.0492401764480577 0.9494021046561091 1.0 12.925214907674688 -5.887297176960197 6.042426588239933 1.0116568585863086 0.8850495413691957 0.5097187665909173 0.03826064196464 0.08555204395889779 4.184945664106408 0.004820387078365387 0.015405440684188617 1.2962919469504415e-06 5.887297176960197 -0.12660731721711294 DLPS(ph)PKK ddPTM_A549_MK2206_60min_R1 3 DLPSPKK 7 1 C9JA69;Q8WY36-2;Q8WY36;C9JYU6;C9JZA0;C9J8D0;Q8WY36-3 C9JA69 BBX HMG box transcription factor BBX 1 DLPS(1)PKK;DLPS(1)PKK;DLPS(1)PKK 55.567 0.016613 42186200.0 9454.7 9623.800000000001 9683.5 8612.599999999999 12262.5 9992.2 9781.0 9188.6 13799.3 14373.2 13039.199999999999 True False 11050.42221477817 10113.610313426674 11056.765909698228 10722.687386634303 10458.702494035531 11049.56797171445 11558.081092685286 10491.112188907324 10673.780582953987 11126.284137379067 9801.206776387507 1.1274552682022991 1.031873986965747 1.1281025043095243 1.0940170563962361 1.0670831391122186 1.127368111275279 1.1792508163923587 1.0703898436447536 1.089027180680305 1.1351953275982156 1.0 13.258743677065864 -10.300123154457216 0.6796112339565515 0.9986512465949605 1.1026903932721441 0.0 0.05401435389218585 0.47582584944542 0.40016323124448994 0.02608778385260107 0.007815372806915228 5.0104513029980684e-11 10.300123154457216 0.10403914667718361 DLPS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 DLPSPKK 7 1 C9JA69;Q8WY36-2;Q8WY36;C9JYU6;C9JZA0;C9J8D0;Q8WY36-3 C9JA69 BBX HMG box transcription factor BBX 1 DLPS(1)PKK;DLPS(1)PKK 65.22399999999999 0.010534 54072000.0 10293.1 10597.5 10973.1 11121.5 11945.5 11254.400000000001 12356.0 12779.099999999999 13098.9 11696.099999999999 11636.3 True False 11338.047934620274 11490.588516929485 11717.80055261071 11808.449796240908 11106.489289737816 11162.747897784428 12826.21434146263 12524.210825489987 12548.398785651772 10957.606249931081 10205.10886858322 1.1110168525026562 1.1259643248200575 1.1482288629653294 1.1571115946242991 1.0883263895331412 1.0938391781541237 1.2568424802354214 1.227249114808192 1.2296192962999593 1.0737373203008593 1.0 13.317003952740986 -10.928371805022891 1.2132359850984853 1.0009353979812354 1.1652086443606886 0.383059322839877 0.05772570467288438 0.31115516227959117 0.8212464090422463 0.04184094070844224 0.010094818796884421 1.1793105805838664e-11 10.928371805022891 0.16427324637945317 DLPTIPGVTSPSSDEPPMEAS(ph)QSHLRNSPEDKR ddPTM_A549_MK2206_60min_R1 2 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR 33 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVT(0.004)S(0.004)PS(0.026)S(0.026)DEPPMEAS(0.314)QS(0.314)HLRNS(0.314)PEDKR;DLPTIPGVT(0.003)S(0.003)PS(0.014)S(0.014)DEPPMEAS(0.333)QS(0.333)HLRNS(0.301)PEDKR 54.691 0.0011975999999999998 9514300.0 1747.79 1919.6599999999999 1894.15 1631.38 2763.8 1901.43 1783.6399999999999 1435.6399999999999 2758.8 2493.8 2724.0 True False 2042.7742226371151 2017.3624944691958 2162.76895212009 2031.0681732354321 2357.2486811837216 2102.638060532916 2107.704300189877 1639.1463664631071 2133.936204898326 1930.4488479806807 2047.5556214245946 0.9976648259332008 0.985254062629863 1.056268718412316 0.9919477409958264 1.151250132850436 1.026901559367651 1.0293758460751525 0.8005381388968886 1.042187173119933 0.9428065483454675 1.0 10.999686927572817 -8.025521623492788 24.955072899429492 0.9997832846949158 1.0362025108753847 0.11268523308177891 0.07657890240651212 1988.7309862912307 1944577.8882033762 0.012230428262316316 0.015818894077927376 9.4292766198679e-09 8.025521623492788 0.03641922618046889 DLPTIPGVTSPSSDEPPMEAS(ph)QSHLRNSPEDKR ddPTM_A549_PD325901_60min_R1 1 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR 33 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSS(0.001)DEPPMEAS(0.333)QS(0.333)HLRNS(0.333)PEDKR 82.78399999999999 1.6355e-06 5424000.0 1703.8 2347.3 2202.7 2125.8 1879.4 2074.8 1891.4 2962.9 2010.2 2756.4 2585.1 True False 1876.7685217287317 2545.1152088500653 2352.188467911127 2257.1058379579117 1747.3974275780208 2057.903516697748 1963.3782620137922 2903.8026351499157 1925.7182846588048 2582.360433589832 2267.1490882990715 0.8278099271966173 1.1226060173923267 1.0375093901194898 0.9955700970911028 0.7707465894486037 0.9077054205736818 0.8660119760746818 1.2808167976851021 0.8494008155871102 1.1390342377206644 1.0 11.14666355085213 -6.547356140343491 24.97567407706925 0.9367760818239513 1.0099553024316887 0.0 0.15104149946779588 549.6259272009117 560812.8358557953 0.01952038396522367 0.04063629625026372 2.835592765490889e-07 6.547356140343491 0.0731792206077374 DLQEQDADAGS(ph)ER ddPTM_A549_MK2206_60min_R1 5 DLQEQDADAGSER 13 0 Q6P158-2;Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER 312.67 2.603999999999999e-135 485140000.0 14763.47 15749.650000000001 14709.0 12912.720000000001 21541.5 17713.87 15824.42 16275.18 24125.300000000003 21811.800000000003 22146.1 True False 17255.182803813033 16551.239912805813 16794.957377575378 16076.336979674039 18372.7738858525 19588.339965884727 18699.51227938973 18582.23660564837 18660.958070187604 16884.499231047 16646.61216873391 1.0365582275186391 0.9942707708354479 1.008911435392247 0.9657422673587015 1.1036944754657474 1.176716305235731 1.1233223967644077 1.1162773792826144 1.1210063573918716 1.0142904189694462 1.0 14.022940976985126 -6.766729341855129 24.99837072728514 1.0798935049173615 1.0014021633008559 0.4195471189185044 0.050581017304921996 139.83022445552925 660788.6208701661 0.009194897221941747 0.01774629624742368 1.7110813517150624e-07 6.766729341855129 -0.07849134161650562 DLQEQDADAGS(ph)ER ddPTM_A549_PD325901_60min_R1 5 DLQEQDADAGSER 13 0 Q6P158-2;Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER 329.35 3.7092999999999986e-178 644390000.0 23555.2 22109.199999999997 23925.9 22824.300000000003 27863.3 21924.3 22427.1 21621.0 25029.5 23678.7 25561.2 True False 25946.50656357826 23972.41987624414 25549.6554521246 24234.10517325372 25906.277931166685 21745.75576977849 23280.57556308002 21189.752193653625 23977.597157430864 22183.622840967764 22417.334445797147 1.1574304976496779 1.0693697742792316 1.139727629701073 1.081043120084118 1.1556359652752406 0.9700419923857376 1.0385077503023432 0.9452395977268532 1.0696007241809358 0.9895745140710429 1.0 14.452327122882268 -7.256255542069459 24.92615060644594 1.0228735083591665 1.1166534160303874 0.6393756338259857 0.0427431502674219 254.83530788506698 1225356.008615454 0.006346533215841956 0.010780028863687141 5.542994630998109e-08 7.256255542069459 0.09377990767122091 DLQNVNIT(ph)LR ddPTM_A549_PD325901_60min_R1 1 DLQNVNITLR 10 0 P35232;C9JZ20;E7ESE2;E9PCW0;C9JW96;D6RBK0;P35232-2 P35232 PHB Prohibitin 1 DLQNVNIT(1)LR 64.65 0.0063028 1220100.0 810.99 626.18 866.02 859.26 855.73 925.43 717.36 949.59 1063.3 1070.4 915.36 True False 893.3211077807164 678.9503861789012 924.7933250013144 912.3345386789513 795.626476908236 917.893604905339 744.6595273544547 930.6496825110563 1018.6131987253532 1002.8147613243935 802.7765229451231 1.112789278519774 0.8457526681124847 1.1519934858191316 1.1364738661413463 0.9910933543364522 1.1433986653444836 0.92760501343829 1.1592886138433753 1.2688627153524572 1.249182970181285 1.0 9.648854615735463 DLQS(ph)PDFTTGFHSDK ddPTM_A549_PD325901_60min_R1 1 DLQSPDFTTGFHSDK 15 0 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(0.997)PDFT(0.003)TGFHSDK 147.49 4.192e-32 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DLQS(ph)PDFTTGFHSDKIEAK ddPTM_A549_MK2206_60min_R1 4 DLQSPDFTTGFHSDKIEAK 19 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(1)PDFTTGFHSDKIEAK;DLQS(0.913)PDFT(0.085)T(0.002)GFHSDKIEAK;DLQS(0.998)PDFT(0.002)TGFHSDKIEAK;DLQS(0.995)PDFT(0.005)TGFHSDKIEAK 190.37 3.4216999999999996e-44 228316000.0 12215.9 13922.1 14556.199999999999 13210.100000000002 18155.7 14822.4 13610.6 14192.1 22398.9 22781.3 24101.1 True False 14277.645269919574 14630.675423902983 16620.488039938995 16446.57509302393 15485.020580710365 16390.896529687183 16083.469841539967 16203.87363648342 17325.584913693318 17634.988507699993 18116.131713478815 0.7881177668462568 0.8076048273052369 0.9174413336580554 0.9078414395048422 0.8547641861749744 0.9047680149892033 0.8877982394869375 0.8944444593780122 0.9563622735643221 0.9734411731274375 1.0 14.14498731321394 -2.0000000000000195 0.09460610383144262 1.0804403615443856 0.30676565893325297 0.734772522366226 0.03191136397216162 40.25231316036138 0.26375249419745656 0.2583779873896758 4.05314262287904 0.009999999999999551 2.0000000000000195 -0.7736747026111326 DLQS(ph)PDFTTGFHSDKIEAK ddPTM_A549_PD325901_60min_R1 4 DLQSPDFTTGFHSDKIEAK 19 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(1)PDFTTGFHSDKIEAK;DLQS(1)PDFTTGFHSDKIEAK;DLQS(0.999)PDFT(0.001)TGFHSDKIEAK;DLQS(0.999)PDFT(0.001)TGFHSDKIEAK 269.45 2.0416999999999996e-111 413715000.0 19401.5 19918.3 20209.2 23837.000000000004 26222.199999999997 26271.1 22369.5 27822.1 26833.300000000003 27510.2 30615.2 True False 21371.125997370582 21596.885044279938 21580.717839791872 25309.357352245137 24380.44313367903 26057.15687175543 23220.783563560086 27267.16638948478 25705.589716314335 25773.20127707991 26849.7244857428 0.7959532697893659 0.8043615142400392 0.8037593775404 0.9426300581104436 0.9080332703832786 0.9704813502124304 0.8648425266296612 1.0155473440319152 0.957387467046971 0.9599056143300642 1.0 14.7126196638461 -4.758805673959117 0.3021990807804186 0.9917970057025934 0.5196276936896765 0.7176354826531022 0.041216671026744346 3.3315986178603563 0.17068475954368534 0.014024327326840806 0.6127102103486957 1.7425864231799728e-05 4.758805673959117 -0.4721693120129169 DLQSSDR ddPTM_A549_MK2206_60min_R1 1 DLQSSDR 7 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 75.109 0.050638 18149000.0 1715.7 2305.4 1610.8 1724.7 1875.5 1458.8 1385.1 1503.0 1842.3 2348.8 2709.0 False True 2005.2682151622894 2422.7350128404432 1839.235661418073 2147.251577424724 1599.6164344598267 1613.1692477269307 1636.754740975196 1716.0548527444544 1425.0219915485673 1818.204448687553 2036.280535403532 0.9847701140869095 1.1897844971347855 0.9032329433201549 1.0544969320738513 0.7855579850852078 0.7922136560654435 0.8037962905984555 0.8427398990013829 0.6998161435875873 0.8929046941595586 1.0 10.991720617762759 -6.755026855270724 24.99649865391069 0.8405454583099978 1.0349908144099944 0.5108087529925938 0.09482555221998341 130.49393611343592 508670.0786926378 0.017504201879950707 0.03575896496606162 1.7578149133950744e-07 6.755026855270724 0.19444535609999658 DLQSSDR ddPTM_A549_PD325901_60min_R1 1 DLQSSDR 7 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 177.78 2.3486999999999997e-05 31699000.0 6875.6 6671.6 5686.3 6072.0 7606.3 6526.0 6334.4 7051.2 6906.1 7641.0 7566.4 False True 7573.605850450804 7233.839145982238 6072.206512499678 6447.053649487459 7072.059728310471 6472.854419688406 6575.45905831668 6910.558284440606 6615.8606336096755 7158.5459559787805 6635.780767361454 1.1413285212347741 1.0901263015743943 0.9150703926757564 0.9715591692235731 1.0657464398303942 0.975447298006828 0.9909096290007845 1.0414084682288878 0.9969980723519744 1.0787797558334933 1.0 12.696050508046717 -5.5703330527964825 7.831746900622653 0.9978800839778623 1.1289002115344506 0.49910799968809305 0.04402134835762448 0.08612084452442093 12.260838471132164 0.004704011670656245 0.018543189627517474 2.689471504500193e-06 5.5703330527964825 0.13102012755658832 DLQYITVSKEELSSGDSLS(ph)PDPWKR ddPTM_A549_PD325901_60min_R1 1 DLQYITVSKEELSSGDSLSPDPWKR 25 2 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 DLQYITVSKEELS(0.001)S(0.001)GDS(0.046)LS(0.952)PDPWKR 59.598 0.00013619999999999998 3372600.0 2144.8 2842.3 2520.0 2588.0 2382.5 2797.3 2459.6 2677.7 3317.7 2922.2 3154.1 True False 2362.5385170816917 3081.830596052717 2691.0223539910307 2747.8548822255507 2215.161419178799 2774.51971624186 2553.201423944764 2624.2911728849863 3178.268606612531 2737.6917932942292 2766.165695487253 0.8540842368683691 1.1141164106981887 0.9728348371831769 0.9933804351302691 0.8008057589581972 1.0030200724303089 0.923011021396903 0.9487107649286078 1.1489798358057821 0.9897063642140179 1.0 11.433671862299457 -8.73566088502188 24.898161395006202 1.0703515906859813 0.954568603549407 0.17867992161105473 0.08636539087585747 212.2436961459484 204995.50817621767 0.014977469116533656 0.016979911635526555 1.8379729479827235e-09 8.73566088502188 -0.11578298713657431 DLRAS(ph)PKPTSK ddPTM_A549_MK2206_60min_R1 4 DLRASPKPTSK 11 2 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 DLRAS(0.997)PKPT(0.002)SK;DLRAS(0.999)PKPTSK;DLRAS(0.999)PKPT(0.001)SK;DLRAS(1)PKPTSK 86.539 6.809100000000001e-05 36977200.0 12828.4 12557.3 12008.000000000002 11180.0 16288.9 13566.0 11974.7 11276.2 17290.9 18330.3 16994.9 True False 14993.520295732313 13196.412933435106 13710.91496294278 13919.10050188927 13892.82438777536 15001.545115618015 14150.347986972554 12874.635881914193 13374.53875789346 14189.472499053762 12774.59729462144 1.1736980782983364 1.0330198775808976 1.0732952786476926 1.089592116359684 1.0875352128418743 1.1743262640407615 1.1076942513820263 1.007831056039228 1.0469636301979255 1.1107569320426276 1.0 13.64099019202664 -8.2575179703605 24.908348371228726 1.0217209622558805 1.1028943093945116 0.25832533204963337 0.048184732642687474 216.0994176029005 1372639.3580077006 0.00662643174987285 0.00839636245567661 5.526905380851198e-09 8.2575179703605 0.08117334713863111 DLRAS(ph)PKPTSK ddPTM_A549_PD325901_60min_R1 2 DLRASPKPTSK 11 2 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 DLRAS(0.998)PKPT(0.002)SK;DLRAS(0.999)PKPTSK 71.531 0.00050579 53001000.0 4852.1 4464.4 5540.2 4780.8 6365.0 5720.0 5080.200000000001 5998.3 6139.9 6055.7 6528.4 True False 5344.681620072769 4840.630655813159 5916.191287929006 5076.09915801542 5917.944358057946 5673.418216459959 5273.529790992109 5878.659200924678 5881.8613550774 5673.342068527776 5725.448186937314 0.9334957623521476 0.8454588178541415 1.0333149641327424 0.8865854675965119 1.0336211532853996 0.990912506972631 0.9210684681460811 1.0267596542637338 1.0273189387159147 0.9908992070649738 1.0 12.483172916170961 -5.797971223085172 0.44929620221346933 1.012332143550235 0.8514426693606242 0.25738953536771547 0.05356385992099896 2.543183721245757 0.46070068570624906 0.01105297076688414 0.19824890586400293 1.5923142323589227e-06 5.797971223085172 -0.16088947418961086 DLRNDEHTRR ddPTM_A549_PD325901_60min_R1 2 DLRNDEHTRR 10 2 C9JNR4;C9JX21;P61586 C9JNR4 RHOA Transforming protein RhoA 0 ; 56.783 0.0048308 7706300.0 867.75 471.37 517.2 854.31 596.89 1159.3400000000001 847.74 868.48 721.32 822.53 790.18 False True 955.8433411962126 511.09400417315874 552.300302176254 907.0787884212169 554.9665055587125 1149.8987194179529 880.0012096011275 851.1574850906201 691.0054288578692 770.5953154261518 692.9928693637231 1.379297512936645 0.7375169742257576 0.7969783335337244 1.3089294688617192 0.8008257084495825 1.6593225850559494 1.2698560815050053 1.2282341171448374 0.9971320909727704 1.1119815938852011 1.0 9.436696697423619 -3.15408959139438 16.644987295372065 1.0631302035860144 1.0453552816230354 0.0 0.27670321579622803 0.0 0.0 0.03458645444374726 0.0 0.0007013106088620638 3.15408959139438 -0.01777492196297903 DLRS(ph)PLIATPTFVADKDGAR ddPTM_A549_PD325901_60min_R1 1 DLRSPLIATPTFVADKDGAR 20 2 P49116;P49116-2 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 DLRS(1)PLIATPTFVADKDGAR 75.71 7.2221e-05 4268000.0 858.78 637.47 966.38 862.15 951.54 1044.5 812.59 853.12 1041.6 925.26 1113.4 True False 945.9627133995781 691.1918341011593 1031.96435811502 915.4030474152853 884.7071130347929 1035.993938302871 843.51355711631 836.1038523403075 997.8251742615709 866.8389256941408 976.4588584241178 0.9687686329419382 0.7078555621039234 1.0568436644432528 0.9374722135171482 0.9060362404439642 1.0609703925210276 0.8638495619545458 0.8562612189208609 1.0218814296712262 0.8877372745566671 1.0 9.931415449454747 -3.9965057345576827 0.15518283305058173 1.0334816512350933 0.6623026042675664 0.0 0.10383563878787368 43.78758248067831 0.7386928562039112 0.17856361665390255 3.363279066765899 0.0001008078298301048 3.9965057345576827 -0.3711790469675269 DLRS(ph)PLTATPTFVTDSESTR ddPTM_A549_PD325901_60min_R1 2 DLRSPLTATPTFVTDSESTR 20 1 A0A087WUK4;P13056-2;P13056-3;P13056 A0A087WUK4 NR2C1 Nuclear receptor subfamily 2 group C member 1 1 DLRS(1)PLTATPTFVTDSESTR;DLRS(0.997)PLT(0.003)ATPTFVTDSESTR 142.25 2.2259000000000002e-21 18038500.0 3801.6000000000004 4141.8 3878.3999999999996 4196.2 4691.4 4086.7 3860.8999999999996 4134.799999999999 4252.9 4105.2 4832.200000000001 True False 4187.535633409994 4490.844021648365 4141.611546713812 4455.389743738352 4361.8922484513805 4053.4192701410643 4007.8286622655482 4052.328170312149 4074.1654028581365 3845.996971402186 4237.87003383961 0.9881227125825726 1.0596936635122702 0.977286116290219 1.051327602819774 1.0292652237141409 0.9564755968857711 0.9457176907887288 0.9562181326831876 0.9613710119295109 0.9075306558935744 1.0 12.049123628764294 -7.252954553860995 24.844774998464892 0.9746218395205113 1.0225218540418994 0.439824006597178 0.033453979162186655 461.9319905954624 1352602.0258512732 0.004161974377264777 0.007136954778966808 5.585286381275432e-08 7.252954553860995 0.047900014521388146 DLRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 DLRSPR 6 1 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 DLRS(1)PR 60.478 0.052976999999999996 31828000.0 2456.1 2390.7 1842.7 1700.5 2952.7 2612.8 2384.4 2262.0 2322.4 2617.9 2500.0 True False 2705.441463914742 2592.1726791623782 1967.7567030552673 1805.536022884292 2745.3125382620087 2591.5222230710806 2475.139646793745 2216.882635495327 2224.7976043635485 2452.605347226392 2192.515848805723 1.2339438574131232 1.1822822993842215 0.8974880177614755 0.8234996448795472 1.2521289366083248 1.181985628283006 1.128903879140472 1.011113619407986 1.0147236133209296 1.118626051694149 1.0 11.098371556025723 -8.28256678731059 19.879369058817606 1.0074590679675361 1.0937723135228434 0.035538323042500375 0.12990535883978896 117.17533006049756 110252.62681053377 0.021596753040152017 0.026143944288587073 5.217148669491961e-09 8.28256678731059 0.08631324555530728 DLRS(ph)PRK ddPTM_A549_MK2206_60min_R1 2 DLRSPRK 7 2 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 DLRS(1)PRK;DLRS(1)PRK 73.57300000000001 0.0062303 35837000.0 6756.7 7122.5 7247.0 6229.700000000001 9089.0 6687.6 6814.7 6350.8 8796.3 9499.1 10463.4 True False 7897.065774545104 7485.004827342785 8274.733572322306 7755.976779661857 7752.020140125491 7395.277393130403 8052.842779094414 7251.045348509304 6803.952094804678 7353.246712588533 7865.04900485099 1.0040707654427032 0.9516793630562502 1.0520892580858214 0.9861320348898196 0.9856289687889057 0.9402709873224131 1.0238769998925115 0.9219326343722738 0.8650870567504602 0.9349270052930645 1.0 12.941240039347582 -8.276102383366949 24.316564694209273 0.9334341216844528 0.9902709908768551 0.34197481765626636 0.04090581376334935 701.2209626816704 1162875.7769475174 0.009005441886817308 0.010910881596932468 5.295385923510949e-09 8.276102383366949 0.05683686919240227 DLRS(ph)PRK ddPTM_A549_PD325901_60min_R1 2 DLRSPRK 7 2 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 DLRS(1)PRK;DLRS(1)PRK 82.287 0.0049347 58272000.0 10467.8 10251.4 10858.0 11123.0 12083.0 12873.0 11916.599999999999 13401.2 11978.3 10888.400000000001 12486.9 True False 11530.483350012928 11115.321455291436 11594.88917445817 11810.042447834157 11234.331764087065 12768.166556029542 12370.092734013733 13133.90255296198 11474.893706660305 10200.90456577403 10951.090460980871 1.052907323804552 1.0149967708600094 1.0587885485715944 1.078435292806115 1.025864209972093 1.1659264985092561 1.1295763447566083 1.1993237202960332 1.0478311495595587 0.9314966945182509 1.0 13.418786913697407 -9.170240827481022 3.054340837221139 1.0178074296109816 1.0894697209232151 0.32230057205467677 0.06035702520068749 0.2529736564701841 4.898104656723773 0.011309631074407295 0.010804305419849253 6.757081738891162e-10 9.170240827481022 0.07166229131223356 DLS(ph)ADRPR ddPTM_A549_MK2206_60min_R1 1 DLSADRPR 8 1 Q07352;G3V2D5;G3V2P5 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 DLS(1)ADRPR 42.718 0.021304 7274200.0 440.18 404.79 312.1 359.68 671.01 252.2 416.91 447.37 478.42 614.09 512.62 True False 514.4716226322415 425.392082002118 356.36047301252813 447.80161614664877 572.3053178815723 278.88763660318904 492.6571504295498 510.786067513165 370.0586338797508 475.3666424959723 385.3223064077368 1.3351721768421128 1.1039902827530066 0.9248373818136496 1.1621481775124594 1.4852639163744015 0.723777554440563 1.2785586046716808 1.3256073137189885 0.9603872595119515 1.23368576018268 1.0 8.589921896177874 -8.804497859948516 24.998787152156755 0.981293888823418 1.1565549406102884 0.002465733276931781 0.21142152857281468 191.04753334293054 110917.06927283057 0.03263032575176135 0.034737246974091966 1.568563626994819e-09 8.804497859948516 0.17526105178687046 DLS(ph)ADRPR ddPTM_A549_PD325901_60min_R1 2 DLSADRPR 8 1 Q07352;G3V2D5;G3V2P5 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 DLS(1)ADRPR;DLS(1)ADRPR 62.463 0.0028861 15060800.0 861.31 1024.8 1042.3 1105.9499999999998 1206.21 766.3900000000001 1321.3899999999999 1192.88 1485.62 1471.68 966.49 True False 948.7495571370902 1111.1634925359133 1113.036745859068 1174.262019705312 1121.489970798598 760.1487739357946 1371.6762195423537 1169.087072603744 1423.1845577827148 1378.757873641521 847.6178570848978 1.1193128474192386 1.3109250628076594 1.3131350838772924 1.3853672499819663 1.3231080037124197 0.8968059929153401 1.6182719701774357 1.3792619667363235 1.679040319746553 1.6266267423663114 1.0 9.727270171605209 DLS(ph)LEEIQK ddPTM_A549_MK2206_60min_R1 2 DLSLEEIQK 9 0 P16949;A2A2D0;P16949-2;E5RGX5;Q93045;Q93045-2 P16949 STMN1;STMN2 Stathmin;Stathmin-2 1 DLS(1)LEEIQK;DLS(1)LEEIQK 118.28 0.00016774 5751100.0 4279.0 4130.5 4021.6000000000004 3645.1 5424.0 4648.8 4336.8 4573.9 7231.6 6609.7 7119.1 True False 5001.190588494164 4340.724807208056 4591.923352345992 4538.149663634759 4626.136785129353 5140.732930376307 5124.740423551536 5222.264331981281 5593.6541464922175 5116.564179363986 5351.230992835474 0.934586938069023 0.8111637888589858 0.8581059869203767 0.8480571423118692 0.8644995499770206 0.9606636187559472 0.9576750527893159 0.9758996273891258 1.0453023152955483 0.956147134409695 1.0 12.385655090750584 -7.628053709830317 1.117999527761095 1.0195657070650257 0.8553599404003867 0.689442274343325 0.03867463724324944 0.13825079181613975 0.3481480305714339 0.005896036560997601 0.01050492817511429 2.354758049534394e-08 7.628053709830317 -0.16420576666463904 DLS(ph)LEEIQK ddPTM_A549_PD325901_60min_R1 2 DLSLEEIQK 9 0 P16949;A2A2D0;P16949-2;E5RGX5;Q93045;Q93045-2 P16949 STMN1;STMN2 Stathmin;Stathmin-2 1 DLS(1)LEEIQK;DLS(1)LEEIQK 139.86 4.4553000000000005e-09 5465600.0 3471.2 3596.5 3482.9 3161.4 3586.5 3896.0 4086.5 3985.1 3948.4 3688.4 3871.2 True False 3823.5936686376217 3899.5896769178476 3719.2705383791103 3356.6724979396645 3334.59661275331 3864.2722677146817 4242.013993718603 3905.6140542495305 3782.462478930865 3455.5137945337187 3395.0669415586885 1.1262204057991843 1.1486046502304106 1.0954925491606298 0.988691108517172 0.9821887668648983 1.138202083856579 1.2494640213989647 1.150379100465232 1.1141054194337392 1.0178043184465986 1.0 11.729224305465712 -10.546747616584558 0.9716361276166725 1.0034150100626185 1.1088006496771754 0.23066682733044064 0.0709197228235765 0.6602601929554841 1.1637955995994846 0.04459167581488473 0.01419542556989989 2.8395687198012397e-11 10.546747616584558 0.10538563961455694 DLS(ph)LEVDR ddPTM_A549_MK2206_60min_R1 1 DLSLEVDR 8 0 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDR 55.567 0.020597 851550.0 145.76 173.78 141.28 130.11 100.74 206.83 163.28 0.0 224.01 202.86 215.23 True False 170.36072451014473 182.62465972560616 161.31562841143858 161.98695584085985 85.92127944947104 228.71661331735757 192.9458624694463 0.0 173.2720926704632 157.03378510761124 161.7824509541906 1.0530235109269244 1.1288286130447927 0.9971145044471837 1.00126407336187 0.5310914684671209 1.4137294370828863 1.1926254135195402 0.0 1.071019085497264 0.970647830969479 1.0 7.337911312409928 DLS(ph)LEVDR ddPTM_A549_PD325901_60min_R1 2 DLSLEVDR 8 0 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDR;DLS(1)LEVDR 67.563 0.0079501 1918570.0 487.4 164.94 325.20000000000005 349.15 260.55 334.58 114.96 324.75 303.36 344.53999999999996 326.85 True False 536.8804891950839 178.84007265698037 347.27002758646137 370.716202522817 242.24986684870336 331.8552914096456 119.33486570852578 318.2726064885533 290.61083416281707 322.78568560043567 286.6495220728602 1.8729509308535333 0.6238980318673724 1.2114795275960473 1.2932734017557124 0.8451082182063734 1.1577039759560286 0.41630931335791105 1.1103196830297009 1.0138193570368137 1.1260639238686414 1.0 8.163144063425975 -5.245998236209607 24.64356610588979 0.9883940506277641 1.872951719615219 0.5133971819437317 0.24984606508671225 1341.6317380872238 2141159.9457020056 0.030253690385290296 1.0021937514926211 5.67546910369345e-06 5.245998236209607 0.8845576689874549 DLS(ph)LEVDRDR ddPTM_A549_MK2206_60min_R1 2 DLSLEVDRDR 10 1 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDRDR;DLS(1)LEVDRDR 90.73100000000001 0.00018286 13520300.0 3231.8 2950.9 2313.5099999999998 2283.3 4976.4 3305.6 2639.8 3625.6000000000004 4425.9 3573.5 3916.8999999999996 True False 3777.248830076056 3101.0882056870264 2641.600505989152 2842.708602501232 4244.3781521972205 3655.396397920305 3119.4174898753317 4139.539902934329 3423.4407167099826 2766.2438680964633 2944.2256290594682 1.2829345661537146 1.053278041967751 0.8972140178105203 0.9655199569094621 1.4415940511845504 1.2415476456157404 1.0595035445268604 1.4059859618356434 1.1627643896991684 0.939548871796262 1.0 11.523672520408939 DLS(ph)LEVDRDR ddPTM_A549_PD325901_60min_R1 2 DLSLEVDRDR 10 1 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDRDR;DLS(1)LEVDRDR 101.39 0.00011887 15845500.0 3242.7 3299.4 3375.4 3312.6000000000004 4337.5 2209.5 3111.0 2970.1 3478.2 3791.6000000000004 3679.1000000000004 True False 3571.8965168504274 3577.452017245305 3604.474941929098 3517.2117785395503 4032.848963562661 2191.506564557392 3229.3908074045207 2910.859025501624 3332.0233497663153 3552.197728921497 3226.594023736457 1.1070176447900637 1.1087394295432766 1.1171144914460132 1.0900695137551122 1.2498780242865961 0.6792012098316558 1.0008667913122906 0.9021460413327097 1.0326751135266063 1.1009125110843616 1.0 11.655796351241968 DLS(ph)LEVDRDRDLLIQQTMR ddPTM_A549_MK2206_60min_R1 1 DLSLEVDRDRDLLIQQTMR 19 2 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDRDRDLLIQQTMR 43.523 0.012156 1828500.0 0.0 147.45 140.57 135.86 265.4 247.14 164.96 140.54 235.1 211.43 257.07 True False 0.0 154.954575190129 160.50493973524866 169.14570609898718 226.3600115732541 273.29219076174485 194.9310967231741 160.46197538569908 181.85022537755412 163.66781615548774 193.23242422893549 0.0 0.8019077326615944 0.8306315069829462 0.8753484658381601 1.171439071245466 1.414318491589989 1.0087908253545796 0.8304091615369321 0.941095812999292 0.8469997559083534 1.0 7.594193387206143 -5.35085143532594 2.5822634496860664 0.9936224142348725 1.302582778731681e-43 0.7390207452388932 0.16813369432683473 0.160707724645163 1.5393137992309995 0.023507274055206882 0.31380472764183126 4.458087258149663e-06 5.35085143532594 -0.9936224142348725 DLS(ph)LEVDRDRDLLIQQTMR ddPTM_A549_PD325901_60min_R1 5 DLSLEVDRDRDLLIQQTMR 19 2 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(1)LEVDRDRDLLIQQTMR;DLS(0.998)LEVDRDRDLLIQQT(0.002)MR;DLS(1)LEVDRDRDLLIQQTMR;DLS(1)LEVDRDRDLLIQQTMR;DLS(1)LEVDRDRDLLIQQTMR 115.01 2.5919e-14 39629300.0 1749.87 1620.62 1763.6799999999998 2096.5699999999997 2335.5 2144.32 2064.65 1909.3600000000001 1821.78 2084.7799999999997 2264.66 True False 1927.5155142137905 1757.1953349663854 1883.3739306694038 2226.070367244059 2171.4625370376016 2126.8573688670294 2143.2213855698305 1871.2763169360571 1745.2169220106043 1953.1466350092182 1986.1211768625487 0.9704924033178395 0.884737223205185 0.9482673829824152 1.1208129660852593 1.0933182538579214 1.0708598214670868 1.0790990049033418 0.9421763076370241 0.8787061647303425 0.9833975176150027 1.0 10.955737931660035 -11.670693134276927 3.7433382625125766 1.0010414234511864 0.9720408528235185 0.0 0.0831856406156637 1.5088330172571935 38.94600660629316 0.09706112690369555 0.013849437311691738 2.134552622090067e-12 11.670693134276927 -0.02900057062766792 DLS(ph)MSEEDQMMR ddPTM_A549_MK2206_60min_R1 4 DLSMSEEDQMMR 12 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DLS(0.944)MS(0.056)EEDQMMR;DLS(0.943)MS(0.057)EEDQMMR;DLS(0.997)MS(0.003)EEDQMMR;DLS(0.964)MS(0.036)EEDQMMR 54.7 0.019794 8214340.0 2018.57 2375.0 1908.1000000000001 1792.3600000000001 2436.89 1748.83 2077.69 1971.6000000000001 3032.9600000000005 2904.44 3256.24 True False 2359.255266701722 2495.8773555548073 2178.6972718846696 2231.4882804620993 2078.426709128662 1933.8900298205992 2455.179378945026 2251.080337771768 2345.999402641884 2248.3249867788136 2447.625740347878 0.9638954305025424 1.0197136410242489 0.8901268016469764 0.9116950535685004 0.8491603413327634 0.7901085521129296 1.0030861084979743 0.9196995687142204 0.9584796253648035 0.9185738447330032 1.0 11.257167261065783 -9.06468728445748 0.928145967695101 0.9895506879411933 0.9137002482080728 0.037512756003612924 0.06515281346320345 0.5899479539573665 1.0603224523651762 0.016336417754586552 0.014597869115802001 8.616139375627472e-10 9.06468728445748 -0.07585043973312044 DLS(ph)MSEEDQMMR ddPTM_A549_PD325901_60min_R1 3 DLSMSEEDQMMR 12 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DLS(1)MSEEDQMMR;DLS(0.997)MS(0.003)EEDQMMR;DLS(0.975)MS(0.025)EEDQMMR 124.86 5.1714999999999995e-06 4180100.0 1633.29 1636.3400000000001 1548.05 1481.87 1515.58 1667.71 1602.44 1527.79 1435.5900000000001 1785.8200000000002 1983.4099999999999 True False 1799.1003984354504 1774.24011453573 1653.1099821808775 1573.4017443290484 1409.1308892671577 1654.128722687488 1663.4217310888134 1497.3170299219307 1375.2571446987026 1673.0630204300526 1739.4631438719034 1.034284862414963 1.0199929333290823 0.9503564292263125 0.9045329588454425 0.8100952838417416 0.9509420929756133 0.9562845507529248 0.860792615926903 0.790621606179877 0.9618272317664348 1.0 10.764426395803541 -5.909026123599549 2.31059527385638 0.897561998646928 1.0331466886805438 0.36885335009848896 0.0613807740981211 0.3071863464623843 3.19833006529683 0.01145875838294604 0.04958123664913301 1.2330306619709543e-06 5.909026123599549 0.13558469003361584 DLS(ph)PEPAPDEGPRR ddPTM_A549_MK2206_60min_R1 2 DLSPEPAPDEGPRR 14 1 Q8TBE0-3;Q8TBE0-2;Q8TBE0 Q8TBE0-3 BAHD1 Bromo adjacent homology domain-containing 1 protein 1 DLS(1)PEPAPDEGPRR;DLS(1)PEPAPDEGPRR 92.70299999999999 2.5237e-05 22667500.0 1089.3799999999999 1023.79 832.38 814.59 1401.1999999999998 778.52 972.39 863.6600000000001 1222.59 1400.0700000000002 2031.38 True False 1273.2407112161188 1075.8965380393497 950.4240004042564 1014.1645865683344 1195.0853361584163 860.9024696602485 1149.0606761799663 986.0864498478214 945.6753170750482 1083.7932146091553 1526.9322827641295 0.8338553880799707 0.7046131319535061 0.6224401770350622 0.6641843898489347 0.7826708162820507 0.5638118201953263 0.7525289033118607 0.6457957965645721 0.6193302268540287 0.7097847277465497 1.0 10.57642036677939 -10.78832913618707 0.9527164406094003 1.0068219828042502 0.6821465632369593 0.06950678328501203 0.11238729534438283 0.24618609496691432 0.3831389796003566 0.05620655315066128 0.012987278785116031 1.6280617154856953e-11 10.78832913618707 -0.32467541956729085 DLS(ph)PEPAPDEGPRR ddPTM_A549_PD325901_60min_R1 2 DLSPEPAPDEGPRR 14 1 Q8TBE0-3;Q8TBE0-2;Q8TBE0 Q8TBE0-3 BAHD1 Bromo adjacent homology domain-containing 1 protein 1 DLS(1)PEPAPDEGPRR;DLS(1)PEPAPDEGPRR 82.59 0.00015421 29209000.0 1563.97 1486.85 1217.6399999999999 1509.1399999999999 1758.24 1693.71 1305.73 1229.91 1551.98 1547.1399999999999 1757.1100000000001 True False 1722.7430830661383 1612.1520676005284 1300.276372664141 1602.356150294385 1634.747287998711 1679.9169873077612 1355.4202696728719 1205.3784802042703 1486.7556777558311 1449.4533163634355 1540.9966092380096 1.117940865501319 1.046174961019352 0.8437892496772594 1.03981808959769 1.060837693086852 1.0901496974340812 0.8795738170657615 0.7822070944077577 0.9648013946578381 0.94059474736947 1.0 10.589647972056063 -7.754016891981646 24.998805883915583 0.9575903387182721 1.026670517698027 0.251496463744289 0.08868300533593858 309.6764098695821 1042980.3414091525 0.014703702247501366 0.021569520456793872 1.7619075152894074e-08 7.754016891981646 0.06908017897975494 DLS(ph)PPDNHLS(ph)PQNDDALETR ddPTM_A549_PD325901_60min_R1 1 DLSPPDNHLSPQNDDALETR 20 0 O94972-2;O94972-3;O94972 O94972-2 TRIM37 E3 ubiquitin-protein ligase TRIM37 2 DLS(1)PPDNHLS(0.998)PQNDDALET(0.002)R 48.773 0.0055988 917830.0 137.96 252.73 314.45 137.21 142.79 205.65 135.07 254.25 327.71 266.74 180.0 True False 151.96559763921582 274.0284440560121 335.79046794146007 145.68515007348057 132.76092299875785 203.9752545830402 140.21016276314003 249.1787842947335 313.93748834222293 249.8979908778669 157.86114111401213 0.9626536116919466 1.73588282792217 2.12712555839782 0.9228689786821085 0.8409981206386559 1.2921182068215449 0.8881866795950498 1.5784681558507738 1.9886938997576846 1.5830241002589924 1.0 7.3025122728059495 -11.291631285624634 1.8513828497080775 0.9986659732102084 1.4740993200768842 0.0 0.46999978981565455 0.6558215059274788 4.060794094028631 0.36749119134568026 0.0729114360783672 5.109386008295661e-12 11.291631285624634 0.4754333468666757 DLS(ph)PQHMVVR ddPTM_A549_MK2206_60min_R1 6 DLSPQHMVVR 10 0 A0A2R8Y5E8;D6RB22;A0A2R8Y3N3;A0A2R8Y5P7;P49590-2;P49590 A0A2R8Y5E8 HARS2 Probable histidine--tRNA ligase, mitochondrial 1 DLS(1)PQHMVVR;DLS(1)PQHMVVR;DLS(1)PQHMVVR;DLS(1)PQHMVVR;DLS(1)PQHMVVR;DLS(1)PQHMVVR 113.24 3.4693e-05 92345900.0 5763.549999999999 6026.8099999999995 6181.23 5172.26 7185.599999999999 6090.84 5398.58 6601.08 8588.25 7781.7 9020.869999999999 True False 6736.2963347313735 6333.548886413165 7057.821360458926 6439.4639321915765 6128.607758706762 6735.368646027626 6379.432105648597 7536.803304959655 6643.0250876170985 6023.808565374635 6780.739015653623 0.9934457467217582 0.9340499423133525 1.040863148421676 0.9496699279128428 0.9038259317396837 0.9933089343917738 0.9408166412129132 1.111501753357654 0.9796904249347149 0.88837050820986 1.0 12.727226802288705 DLS(ph)PQHMVVR ddPTM_A549_PD325901_60min_R1 2 DLSPQHMVVR 10 0 A0A2R8Y5E8;D6RB22;A0A2R8Y3N3;A0A2R8Y5P7;P49590-2;P49590 A0A2R8Y5E8 HARS2 Probable histidine--tRNA ligase, mitochondrial 1 DLS(1)PQHMVVR;DLS(1)PQHMVVR 126.5 1.9002e-06 81721000.0 2449.4 2601.9 2636.3 2187.38 2771.2 2651.8 2458.9 2890.2 2977.1 2866.0 3126.2 True False 2698.0612848470228 2821.1712443688457 2815.215171359744 2322.4894946995846 2576.560472121002 2630.2046200014884 2552.47478506171 2832.552693681963 2851.9828401441255 2685.0402708853817 2741.6972186145813 0.9840843352536177 1.0289871635768824 1.0268147599399442 0.8470991905784446 0.9397684232334651 0.9593344597440882 0.930983468098462 1.0331384058204984 1.0402253103591332 0.9793350821729946 1.0 11.42085353946899 -8.271001349619153 24.78690564147405 1.0205867709768066 0.9597392074503341 0.2112936985625944 0.04905422851283274 642.7070379063928 1666046.736616741 0.008282884717548938 0.01007683319767834 5.357949924673008e-09 8.271001349619153 -0.06084756352647247 DLS(ph)PTLIDNSAAK ddPTM_A549_MK2206_60min_R1 1 DLSPTLIDNSAAK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 DLS(0.917)PT(0.083)LIDNSAAK 143.93 2.1443e-12 6302600.0 1771.4 2429.0 1729.6 2046.3 3309.0 2056.7 1940.8 2063.5 3055.7 2535.6 2916.5 True False 2070.3690134280346 2552.6257249021583 1974.883287800285 2547.643591861898 2822.2504834057936 2274.3386288730317 2293.4182378778864 2356.0074442037144 2363.5888289502013 1962.8061989493206 2192.2525586948714 0.9444025986953809 1.1643848765407898 0.900846610928809 1.1621122674746034 1.2873747015197843 1.0374437105125467 1.0461469089324464 1.0746970894659749 1.0781553519350584 0.8953376248391067 1.0 11.09819829837451 -10.537679037340373 0.6155905781000668 0.9927835567358222 1.082981257107456 0.1480680577402833 0.10532697724462547 2.091430231700773 1.2583197670093864 0.1007112720725486 0.021153436474427245 2.8994856430579423e-11 10.537679037340373 0.09019770037163377 DLS(ph)PTLIDNSAAK ddPTM_A549_PD325901_60min_R1 3 DLSPTLIDNSAAK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 DLS(0.966)PT(0.034)LIDNSAAK;DLS(0.95)PT(0.05)LIDNSAAK;DLS(0.867)PT(0.133)LIDNSAAK 186.05 2.995e-25 15793300.0 9539.6 9318.0 7642.699999999999 8885.4 10824.3 9055.400000000001 8852.5 8769.4 8328.1 10603.7 10691.199999999999 True False 10508.053169317656 10103.260561523846 8161.379581288583 9434.230977792467 10064.038509807797 8981.655824708301 9189.386731773871 8594.487437538783 7978.098918747875 9934.180572361236 9376.250177100703 1.1207095556154334 1.0775374345491224 0.8704310814168379 1.006183794117756 1.0733543068621245 0.9579155478001103 0.9800705568007132 0.916623092942721 0.8508837507591804 1.0595046404183144 1.0 13.194795348923883 -7.726427161944655 1.842923195145843 0.927738923077198 1.0210556486798075 0.08970093462350093 0.07982631911614192 0.40593444058085265 2.821484810227358 0.013222652138979211 0.020562339794700252 1.8774692732707285e-08 7.726427161944655 0.09331672560260951 DLS(ph)RDR ddPTM_A549_PD325901_60min_R1 1 DLSRDR 6 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;P51811 Q9UDY2-7 TJP2;XK Tight junction protein ZO-2;Membrane transport protein XK 1 DLS(1)RDR 68.383 0.044427 13410000.0 1192.2 1310.5 1202.4 1494.0 1804.2 1305.1 1288.2 1499.2 1190.3 1775.0 1581.6 True False 1313.231266348747 1420.9404342001496 1284.002094618577 1586.2809868798197 1677.4792161521036 1294.4716983045255 1337.2231559300883 1469.2972799003524 1140.27583037975 1662.9261970766047 1387.0732265884533 0.9467641946912041 1.0244163083552509 0.925691643386858 1.1436173350280314 1.209366011827589 0.9332396253428639 0.9640609668597147 1.0592788122038312 0.8220732752403357 1.198874122288857 1.0 10.43782823731812 -8.157440402169755 1.426266810394244 0.9206733756539458 1.0377720112006819 0.0 0.12763153167929295 0.5122710652633441 2.0457290785389315 0.019456607328100492 0.026339382637937617 6.9592044866797165e-09 8.157440402169755 0.11709863554673605 DLS(ph)SEDTR ddPTM_A549_MK2206_60min_R1 1 DLSSEDTR 8 0 F8VYN3;P18846;F8VS03 F8VYN3 ATF1 Cyclic AMP-dependent transcription factor ATF-1 1 DLS(0.513)S(0.482)EDT(0.006)R 57.858999999999995 0.015816999999999998 2123200.0 349.52 361.57 300.68 299.46 299.37 141.09 200.0 389.0 449.61 348.19 528.38 True False 408.5104310564338 379.97236860966376 343.32094529127505 372.82771344327017 255.33306957304112 156.02005015203784 236.33741115806743 444.14194126253716 347.77405287963455 269.53363717154264 397.16866345386455 1.0285565520299078 0.9567027904602088 0.8644210303644851 0.9387138204738505 0.6428832208276694 0.39283071528164826 0.5950555340968399 1.1182703524497195 0.8756331626350282 0.6786377223913383 1.0 8.633607988715644 -8.263520599940547 24.959511623011206 0.952905196085154 0.7712708712907939 0.09835288201702597 0.19972808879036508 263.1733331259705 3156158.505635298 0.03253454928172281 0.040329579493126516 5.4510403909255705e-09 8.263520599940547 -0.18163432479436015 DLS(ph)SEGQTK ddPTM_A549_MK2206_60min_R1 1 DLSSEGQTK 9 0 Q7L2Z9 Q7L2Z9 CENPQ Centromere protein Q 1 DLS(0.984)S(0.016)EGQTK 83.397 0.0014365 7287700.0 1992.1 1508.8 2080.1 1680.4 2179.3 1828.8 1695.2 1687.6 2668.5 2740.9 2935.5 True False 2328.3177778310874 1585.591475394145 2375.0894582292854 2092.0980754360216 1858.7278569012526 2022.322402140809 2003.195896975781 1926.8224680582457 2064.0890107188566 2121.728786362276 2206.534334321547 1.0551921815197975 0.7185890791414646 1.0763890782418144 0.9481375580223131 0.8423743188536262 0.916515265901186 0.9078471455517654 0.8732347546500765 0.935443867159906 0.9615661779469449 1.0 11.107566480908705 -9.987084898770423 0.8648442196255283 0.9938383330702638 0.9149089262993042 0.056710424156522166 0.0924285392551931 0.8665542314596452 1.3148156114159277 0.03443374334314979 0.016752314538685913 1.0301847134045765e-10 9.987084898770423 -0.07892940677095961 DLS(ph)SEQIR ddPTM_A549_PD325901_60min_R1 2 DLSSEQIR 8 0 Q6ZU80;Q86TS1;Q6ZU80-3;Q6ZU80-1;H0YIZ9 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 DLS(0.901)S(0.099)EQIR;DLS(0.979)S(0.021)EQIR 60.518 0.011266 3362600.0 1148.4499999999998 886.74 731.8199999999999 810.37 1193.24 1252.0300000000002 1081.17 1126.93 1051.63 1052.77 1207.27 True False 1265.0397985557938 961.4686918143007 781.4857059911569 860.4247144161972 1109.4309388545269 1241.833882789223 1122.314515988925 1104.4524970905177 1007.4336482418354 986.2979225331479 1058.7834435150744 1.1948050437547126 0.9080881437117143 0.738097777007816 0.8126541075856433 1.0478355566000417 1.1728875157571752 1.0600038401270544 1.0431335169199716 0.9515011350170325 0.9315388605423593 1.0 10.04819182496934 -6.777960755979382 24.99588129832112 1.0072043588102102 0.9005086275691604 0.1563451877371581 0.12166424549139088 363.9624379071225 550653.5749780551 0.018016784591531658 0.03411736782036839 1.667397876312616e-07 6.777960755979382 -0.10669573124104981 DLS(ph)SSPPGPYGQEMYAFR ddPTM_A549_MK2206_60min_R1 1 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.341)S(0.33)S(0.33)PPGPYGQEMYAFR 204.13 5.2946999999999995e-49 11023000.0 2956.1 3415.5 3192.6 2516.1 5113.7 3131.1 3413.2 3462.4 4872.9 4274.1 5440.1 True False 3455.0174102939013 3589.3343612199774 3645.3586867664135 3132.5446129520224 4361.481504077426 3462.430923744034 4033.3342588235773 3953.2058031552883 3769.1959304223037 3308.5778415086306 4089.173030878096 0.8449183696078475 0.8777653413333832 0.8914659906146404 0.7660582199133181 1.0665925533458913 0.8467313311514535 0.9863447274955425 0.9667494560156554 0.9217501685451834 0.8091068332215223 1.0 11.997593395584127 -2.0000000000378253 0.11988105957343909 1.0177269057626264 0.46546304572674785 0.0 0.08706995515072054 75.79159921085673 0.6022104395472629 0.23224201967389557 7.034319175706907 0.00999999999912904 2.0000000000378253 -0.5522638600358785 DLS(ph)TPGLEK ddPTM_A549_MK2206_60min_R1 1 DLSTPGLEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.5)T(0.5)PGLEK 104.82 0.00059367 48362000.0 4382.0 4064.9 4926.9 4145.5 5801.2 5027.0 4448.0 4408.4 6892.7 6164.2 8115.9 True False 5121.5744703859355 4271.786047408311 5625.608505240068 5161.147686098565 4947.851164803172 5558.953803347465 5256.144024155418 5033.304200158787 5331.514455380127 4771.702938777174 6100.498042555011 0.8395338273464829 0.7002356229950041 0.9221556118857387 0.8460207101282787 0.811056921957623 0.9112295036520105 0.8615926089132945 0.8250644726132456 0.873947408586854 0.7821825210812933 1.0 12.574711313270965 -14.999999999999996 0.13901109348401378 1.5724504862001971 0.7826760744537725 0.0 0.08496229705787112 34.030278349340286 0.31829052973344896 5.326467276466461 0.1241691008772424 1.0000000000000082e-15 14.999999999999996 -0.7897744117464246 DLS(ph)TPGLEK ddPTM_A549_PD325901_60min_R1 1 DLSTPGLEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.937)T(0.063)PGLEK 80.763 0.0016469999999999998 12546000.0 1400.3 1419.3 1656.7 1320.3 1605.7 1682.6 1671.9 1565.4 1533.9 1103.7 1396.7 True False 1542.457425153623 1538.9093920337841 1769.1336245464045 1401.8519323811413 1492.9211713642806 1668.897463464253 1735.5250693987855 1534.1768689674568 1469.435517280936 1034.012193641379 1224.9147544107827 1.2592365465428548 1.2563399914094768 1.4442912195938122 1.1444485645496778 1.2187959741593741 1.3624600874915886 1.4168537550465055 1.2524764384158615 1.1996226774064571 0.8441503295784587 1.0 10.25846563579351 -9.7798183479112 0.6824326125932361 1.0135748619624863 1.2978431411365465 0.6423969899827069 0.10022897992990797 0.3169417657500103 0.3102911913803622 0.040868644057801086 0.019925323058392515 1.660281207035954e-10 9.7798183479112 0.2842682791740603 DLSELGSVR ddPTM_A549_MK2206_60min_R1 1 DLSELGSVR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 79.906 0.004751699999999999 1376300.0 902.86 903.19 703.47 644.8 1297.1 1008.2 1122.6 1056.0 1440.9 1410.5 1259.2 False True 1055.240695192298 949.1585131635984 803.2326239991138 802.7760289461723 1106.2983082579804 1114.8870548110044 1326.561888830233 1205.6912338643683 1114.5384506444825 1091.8670703652053 946.5058878479614 1.1148802228706294 1.0028025449706057 0.8486292946633399 0.8481468940160712 1.1688234827290231 1.1778976434535295 1.401535802219247 1.273833844399751 1.1775293370636828 1.1535766278725923 1.0 9.886467670180869 -6.774990923595313 24.9845785585472 1.1368282352821535 0.949629186872781 0.4319976424697396 0.12167208987140705 236.94281099512207 436844.54844419024 0.02146634372629486 0.04072481476547688 1.6788391041402752e-07 6.774990923595313 -0.18719904840937251 DLSELGSVR ddPTM_A549_PD325901_60min_R1 1 DLSELGSVR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 91.069 0.0028914 3182200.0 1689.2 1473.6 1726.9 1415.2 1906.5 1815.7 1511.5 1800.2 1863.4 2048.9 2165.7 False True 1860.6863404766857 1597.7854435996494 1844.097818693297 1502.6136898476038 1772.5940170679448 1800.9135411934158 1569.020959624537 1764.2935987704193 1785.087778148052 1919.5321043325373 1899.3326295034235 0.9796527009400972 0.84123518902394 0.9709188322507957 0.7911271919971485 0.9332720290976024 0.9481822789851511 0.8260906674544701 0.9289018528743384 0.9398500033218296 1.0106350380735547 1.0 10.891276870987685 -9.511844998292363 0.6984102522934448 0.9931730553792482 0.8976941965703749 0.30596165958783905 0.058161645006056896 0.5187939593537956 0.550580009758818 0.020562248021976138 0.012537085794743205 3.0771948838510604e-10 9.511844998292363 -0.0954788588088733 DLSLDDFK ddPTM_A549_MK2206_60min_R1 2 DLSLDDFK 8 0 P30048-2;P30048 P30048-2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial 0 ; 114.89 0.0036479999999999998 4297000.0 2959.3 2841.4 2914.2 2444.8 3493.0 2781.8 3032.4 2687.8 3753.2 3626.2 3894.9 False True 3458.757492061412 2986.0151233993397 3327.4773804969864 3043.776109751242 2979.184327149119 3076.1682295906066 3583.347827978618 3068.803881042278 2903.106192628824 2807.038901494723 2927.688836228578 1.1813951842358192 1.0199222972226436 1.1365543152404858 1.039651506705954 1.0175891270558919 1.0507155649619166 1.2239510509575375 1.0482001512822938 0.9916033960660172 0.958790041741842 1.0 11.515546512367003 -8.562806976543108 5.876051729390025 0.9967961902333377 1.0906992318575306 0.36885938492209025 0.063391367910411 0.15716083297175282 13.949296988266239 0.010112776053691997 0.011542684435226372 2.7364846947189434e-09 8.562806976543108 0.09390304162419294 DLSLEEIQK ddPTM_A549_PD325901_60min_R1 1 DLSLEEIQK 9 0 P16949;A2A2D0;P16949-2;E5RGX5;Q93045;Q93045-2 P16949 STMN1;STMN2 Stathmin;Stathmin-2 0 113.62 0.00063709 1745900.0 2237.0 2368.7 2176.2 2221.3 2584.8 2632.4 2647.3 2604.9 2399.9 2378.2 2635.6 False True 2464.098593207638 2568.3186619533717 2323.8900185536827 2358.5046560616743 2403.2525650759117 2610.96260716944 2748.044450158144 2552.9432259954838 2299.0405488770593 2228.0400461338477 2311.437908444946 1.0660457649348654 1.1111346113040286 1.0053871704981745 1.0203625403238252 1.039721878877004 1.1295837096164973 1.188889582591873 1.1044827190331121 0.9946365162903177 0.963919488381496 1.0 11.174574893014995 -8.769109768745862 24.989635789763593 0.997467235898853 1.0830634483795192 0.4195432802355621 0.05034703618194422 141.89147239117005 462271.95116794284 0.00935902382189559 0.010054885713158138 1.7017283390008245e-09 8.769109768745862 0.08559621248066618 DLSLEVDRDRDLLIQQT(ph)MR ddPTM_A549_PD325901_60min_R1 1 DLSLEVDRDRDLLIQQTMR 19 2 E7EMW7;O95071-2;O95071;E5RFK7 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 DLS(0.115)LEVDRDRDLLIQQT(0.885)MR 48.053000000000004 0.0059537 7103100.0 1490.7 1320.0 1116.4 1555.7 1130.2 1528.3 1004.4 1468.1 1388.5 1448.1 1530.4 True False 1642.0347666046619 1431.241032540403 1192.165617458566 1651.792055748953 1050.8186509783325 1515.8540315062507 1042.6229916287691 1438.8175937978308 1330.146173638817 1356.666718865708 1342.1705020049121 1.2234174154116912 1.0663630517899467 0.8882370873728254 1.230687199041801 0.7829248589569187 1.1294049669858583 0.7768185860673559 1.0720080583268288 0.9910411319961707 1.0108005777501008 1.0 10.390352239935025 -5.361117543804888 3.3708706391777175 0.9908348920865419 1.2324458104672382 0.2208406213023063 0.1294035197923793 0.2599332952301416 4.728234647723517 0.014849677267382526 0.13563051841656817 4.353940163380154e-06 5.361117543804888 0.24161091838069637 DLSMS(ph)EEDQMMR ddPTM_A549_PD325901_60min_R1 2 DLSMSEEDQMMR 12 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DLS(0.129)MS(0.871)EEDQMMR;DLS(0.429)MS(0.571)EEDQMMR 67.08 0.001403 7167200.0 1841.03 1820.74 1930.41 2226.04 1817.0299999999997 2159.54 2514.6 2128.18 2980.5 2106.63 2370.8999999999996 True False 2027.9300103053456 1974.1801496875855 2061.4192310983417 2363.537435096355 1689.4080812132001 2141.9534222332054 2610.294479041917 2085.731780375086 2855.239949967945 1973.6170222802748 2079.294330373397 0.9752972345868768 0.9494471854463552 0.9914032857138387 1.1367017168136624 0.8124910728294145 1.030134787049872 1.255375172678494 1.0030959782401432 1.373177384394255 0.9491763592342674 1.0 11.021878275140674 -7.596502313500994 6.485731299204321 1.169914849813555 0.9760672605442207 0.15043226504638563 0.13740105905403688 0.21918590277159827 15.365324835301132 0.023337865970275627 0.03473826181504695 2.5321981461420636e-08 7.596502313500994 -0.19384758926933432 DLSPT(ph)LIDNSAAK ddPTM_A549_MK2206_60min_R1 1 DLSPTLIDNSAAK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 DLS(0.434)PT(0.566)LIDNSAAK 94.09 0.00018401 5686300.0 2280.3 2351.8 2114.6 2277.2 2277.5 1951.1 2686.0 2633.1 3664.8 3435.9 3472.2 True False 2665.1588920175836 2471.496574650021 2414.4820770018982 2835.1141022273914 1942.4827669860065 2157.564106964638 3174.011431852848 3006.349988530555 2834.7286514830316 2659.727803663814 2609.9569121550935 1.0211505330242823 0.9469491864558243 0.9251041907079655 1.0862685468191815 0.7442585576564402 0.826666561779786 1.2161164106084814 1.151877249210276 1.0861208621035585 1.0190696219071387 1.0 11.349810274164799 -7.74719649490657 24.999974158887238 1.0637735081431408 0.9251715296314731 0.38917824940708134 0.10251688983803786 241.4909818628895 423878.5478294991 0.016502439923884955 0.024412087453837137 1.7897958843921278e-08 7.74719649490657 -0.13860197851166767 DLSPT(ph)LIDNSAAK ddPTM_A549_PD325901_60min_R1 1 DLSPTLIDNSAAK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 DLS(0.308)PT(0.692)LIDNSAAK 113.35 2.5881999999999997e-05 3645800.0 2230.2 2397.7 2491.4 2220.9 2971.6 2690.6 2388.6 2810.8 2523.3 2779.8 2833.2 True False 2456.608262213533 2599.7625937288817 2660.481386005259 2358.07994897014 2762.8850674634687 2668.6886456655875 2479.4994800920726 2754.7363889700573 2417.254476012117 2604.2829535963656 2484.7343611345495 0.9886804403074404 1.0462939758847338 1.0707307097369 0.9490269808533665 1.1119438402268134 1.074033783010528 0.9978931828189125 1.1086643433836616 0.9728422135669984 1.0481132286540398 1.0 11.27887590853871 -8.816023050831733 24.99993189383205 0.987175452709859 1.0430580281482191 0.056411272823356784 0.051085647210200966 93.19344109124174 42683.133301403366 0.0077678297363694875 0.008269487021397542 1.5274849825274727e-09 8.816023050831733 0.05588257543836017 DLSQESSSTAPGSEVTIKQEPVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DLSQESSSTAPGSEVTIKQEPVSPK 25 1 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 DLSQESSSTAPGSEVTIKQEPVS(1)PK;DLSQESSSTAPGSEVTIKQEPVS(1)PK 262.33 6.392699999999998e-138 39825000.0 4962.9 5198.0 5511.5 5838.8 6786.7 4974.299999999999 5729.200000000001 4990.9 8834.0 8433.1 8620.0 True False 5800.516188744491 5462.5559975469 6293.113575804387 7269.306262113689 5788.385420287124 5500.677124326897 6770.1214800339985 5698.375358990221 6833.113104999206 6528.056852957682 6479.416100102789 0.8952220538286578 0.8430630033870247 0.9712470195739635 1.1219076147923837 0.8933498529590187 0.8489464234654778 1.0448659841319032 0.879458159648031 1.0545877899230467 1.0075069654585267 1.0 12.661648093537206 -8.775313510217153 24.997177349275194 1.0257775700506004 0.9405853364032504 0.1717505049673823 0.08115896334049857 291.4821627826404 525164.7362725313 0.014220092151785508 0.015176830867253669 1.677592553763406e-09 8.775313510217153 -0.08519223364735007 DLSQESSSTAPGSEVTIKQEPVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DLSQESSSTAPGSEVTIKQEPVSPK 25 1 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 DLSQESSSTAPGSEVTIKQEPVS(1)PK;DLSQESSSTAPGSEVTIKQEPVS(1)PK 240.23 1.2155999999999996e-111 75875000.0 4297.8 4805.8 5589.7 5294.4 6556.6 6073.6 6053.9 7102.799999999999 6663.200000000001 6459.1 6075.7 True False 4734.1094921268605 5210.801631956569 5969.050655596689 5621.423063545192 6096.087035042057 6024.138615295661 6284.284477321194 6961.129081961195 6383.168875902167 6051.2713236831 5328.427417035577 0.8884627905395472 0.9779248592740618 1.1202274495685103 1.0549872642672913 1.1440687013117956 1.1305659519797189 1.1793882107185387 1.3064134194088277 1.1979461061052394 1.1356580187874026 1.0 12.379494096745724 -5.4804063671657515 1.5018669616483562 1.121887353739321 0.8420210002654726 0.5243242133315069 0.07629825300011595 0.6410447183407517 1.7785582965800792 0.014312199428582079 0.23391695251030017 3.3082142866671506e-06 5.4804063671657515 -0.2798663534738485 DLSS(ph)EDTR ddPTM_A549_PD325901_60min_R1 2 DLSSEDTR 8 0 F8VYN3;P18846;F8VS03 F8VYN3 ATF1 Cyclic AMP-dependent transcription factor ATF-1 1 DLS(0.052)S(0.948)EDTR;DLS(0.41)S(0.583)EDT(0.006)R 120.15 0.0012072 7184000.0 611.52 502.08000000000004 638.88 751.61 782.47 553.78 502.78 535.2 694.37 669.06 674.79 True False 673.6010602227699 544.3920436499133 682.2382386975355 798.0352426698405 727.5120065749566 549.2701992851736 521.9135680317726 524.5250161437225 665.1880436367198 626.815437417506 591.7951078462455 1.138233573228149 0.9198995335246197 1.1528284530442385 1.34849922226322 1.2293308899132902 0.9281425141957741 0.8819159893551725 0.8863287465363764 1.124017476348491 1.0591764431759365 1.0 9.208953960123502 -7.256109157348297 24.970610158736605 1.0227025221714192 1.1548667879857593 0.3225445710021395 0.11984823195999687 597.9829590547578 2801381.768051212 0.02008924172724431 0.03414642103561765 5.5448632858414255e-08 7.256109157348297 0.13216426581434004 DLSS(ph)EGQTK ddPTM_A549_MK2206_60min_R1 1 DLSSEGQTK 9 0 Q7L2Z9 Q7L2Z9 CENPQ Centromere protein Q 1 DLS(0.317)S(0.683)EGQTK 110.39 0.00036371 7027900.0 2564.1 2083.1 2221.8 2221.6 2897.9 2392.1 2512.8 2489.7 3527.9 3801.9 4065.8 True False 2996.8573937737533 2189.120892360514 2536.8846489562175 2765.892099731412 2471.622748824918 2645.2304342525317 2969.3432337899585 2842.622599386473 2728.8362828986524 2943.0481494657747 3056.149649628528 0.9805990338653797 0.7163002939422811 0.8300917624451319 0.9050250860809789 0.8087374743332156 0.8655434901802197 0.9715961501266402 0.9301320044101868 0.8929000853182499 0.9629921590467598 1.0 11.577499473811578 -7.654535670243516 5.0652661983353555 0.9477942806964915 0.8425677568949483 0.36788648379996836 0.06547615202212274 0.18019542164729352 7.401278869078946 0.010327899388744552 0.015389880628542624 2.215462124581188e-08 7.654535670243516 -0.10522652380154318 DLSS(ph)SPPGPYGQEMYAFR ddPTM_A549_MK2206_60min_R1 1 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.038)S(0.481)S(0.481)PPGPYGQEMYAFR 191.78 2.7557999999999994e-40 10981000.0 2163.3 2656.0 2264.8 2229.3 2845.8 3041.4 2558.3 2266.1 3646.3 3725.9 3071.8 True False 2528.4121523929484 2791.1790553067676 2585.9826955423723 2775.478600077082 2427.186589808464 3363.2389292820744 3023.109994828419 2587.3266146401925 2820.4188719446015 2884.2166022500655 2308.987282632918 1.0950307831534793 1.2088325805432807 1.1199640270835962 1.2020328656432564 1.0511909736639018 1.4565861642369042 1.309279621229093 1.1205460654117967 1.2214960615670878 1.2491262398644392 1.0 11.173044511765909 -10.689180731868419 0.8265003498972693 0.9927433422427387 1.201973827371416 0.0 0.12880377189015857 0.6482844435895312 0.7433520864426691 0.08668535735394284 0.0198510970594132 2.0455931849318334e-11 10.689180731868419 0.20923048512867726 DLSSS(ph)PPGPYGQEMYAFR ddPTM_A549_MK2206_60min_R1 1 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.029)S(0.172)S(0.799)PPGPY(0.001)GQEMYAFR 103.88 2.1831e-09 11847000.0 2309.7 2573.9 2996.7 2583.0 4103.3 2697.8 3259.1 2871.0 4531.9 4809.4 4069.4 True False 2699.520893256596 2704.9005159842186 3421.6771210401894 3215.8351159552753 3499.7100056086406 2983.2794053452953 3851.236283526286 3277.9730420687483 3505.431885957201 3722.9531997266376 3058.8556702735827 0.8825264034164619 0.8842851077515186 1.1186134587167873 1.051319664149977 1.1441239413874105 0.9752926345421431 1.2590447862425078 1.0716337726963 1.1459945364613024 1.2171065264395617 1.0 11.578776320720374 -5.75503576312907 24.951886358361808 1.0831566890204651 0.8834056406512704 0.4994600232128784 0.08393698120962484 89.21737340309701 347627.7829276517 0.010621070865604295 0.039234768543268246 1.7577788590441353e-06 5.75503576312907 -0.19975104836919477 DLSSS(ph)PPGPYGQEMYAFR ddPTM_A549_PD325901_60min_R1 4 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.012)S(0.101)S(0.887)PPGPYGQEMYAFR;DLS(0.023)S(0.132)S(0.808)PPGPY(0.032)GQEMY(0.005)AFR;DLS(0.004)S(0.033)S(0.962)PPGPYGQEMYAFR;DLS(0.014)S(0.09)S(0.648)PPGPY(0.246)GQEMY(0.002)AFR 147.83 6.2269e-17 68135000.0 10248.400000000001 9061.3 11844.0 11092.1 10775.8 12036.500000000002 10682.6 11476.000000000002 12012.6 12680.0 11338.0 True False 11288.810023526677 9824.92755163511 12647.805063757836 11777.233825013143 10018.944982491877 11938.478734688853 11089.132188743022 11247.10217725217 11507.752196941768 11879.382636017659 9943.497877503716 1.1352956638193297 0.9880755919768575 1.2719673921158445 1.1844155819309916 1.0075875819472797 1.2006316973927862 1.115214417034392 1.1311011794649994 1.1573142910782974 1.1946885072398628 1.0 13.2795377302957 -10.787053135151575 0.9126124327422238 0.9956414347653357 1.1329664286598515 0.0 0.0954033286242539 0.6233895920093726 0.8735253396474193 0.05910957313762683 0.01309789316003735 1.6328521591371976e-11 10.787053135151575 0.1373249938945158 DLSSSPPGPY(ph)GQEMYAFR ddPTM_A549_MK2206_60min_R1 1 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLS(0.005)S(0.023)S(0.392)PPGPY(0.543)GQEMY(0.037)AFR 63.943999999999996 0.00092676 12302000.0 1716.1 2246.6 2230.1 1798.5 3365.8 2445.7 1814.1 2152.0 3363.7 3044.9 3583.9 True False 2005.735725383229 2360.9423439955503 2546.361713762381 2239.1325807377325 2870.6952786482984 2704.502350675729 2143.69848790925 2457.0525902235963 2601.827320725134 2357.0549752251077 2693.918719391924 0.7445420349712583 0.8763970223008312 0.9452258880094015 0.831180452706143 1.0656205987151226 1.0039287121796288 0.7957547020546818 0.9120737654542921 0.9658150789762593 0.8749540059460837 1.0 11.395490607288881 -4.023697038997857 0.5816226401521946 0.9694988132900041 7.230837065008429e-34 0.2611827346227803 0.079667224290781 9.264684531810753 0.7195750478031229 0.013020191338504685 8.43151185383882 9.468974805373957e-05 4.023697038997857 -0.9694988132900041 DLSSVQTLLTK ddPTM_A549_MK2206_60min_R1 1 DLSSVQTLLTK 11 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 86.014 0.0010475999999999999 589070.0 1470.9 1577.5 1901.9 1891.5 2028.1 1655.1 1540.7 1860.2 2475.4 2289.5 2507.6 False True 1719.1519599476665 1657.7880119527197 2171.618018655967 2354.917584912661 1729.7691766078242 1830.2415834335375 1820.6252468561718 2123.8890466235757 1914.7258524015208 1772.3003598731916 1884.8937137607604 0.9120683821039415 0.8795127278795382 1.152116961716176 1.2493635942018735 0.917701175392309 0.9710051925324849 0.9659034000509453 1.1267951243712142 1.0158269606519292 0.940265409627304 1.0 10.880267459109104 DLST(ph)PGLEK ddPTM_A549_MK2206_60min_R1 1 DLSTPGLEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.141)T(0.859)PGLEK 134.57 4.8841e-05 43233000.0 4357.8 4175.5 4843.6 3903.2 6228.6 4292.4 4165.5 3912.2 6881.6 6117.5 6998.7 True False 5093.29010201913 4388.015114997514 5530.495312667355 4859.484175221306 5312.381190976528 4746.618918935481 4922.317430894651 4466.76633061002 5322.92858765707 4735.5525012117305 5260.729635706426 0.9681718040496085 0.8341077034665512 1.0512791372379098 0.9237281730348342 1.0098183253743978 0.902273875988324 0.9356720021278317 0.8490773409628396 1.011823255756859 0.9001702860891894 1.0 12.361047192319205 DLST(ph)PGLEKDSGGK ddPTM_A549_PD325901_60min_R1 2 DLSTPGLEKDSGGK 14 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.171)T(0.829)PGLEKDSGGK;DLS(0.027)T(0.971)PGLEKDS(0.002)GGK 102.08 1.1157e-05 33219000.0 7527.1 7179.1 10015.400000000001 9952.099999999999 10952.0 11347.5 10288.0 10560.2 11457.7 11651.5 10707.1 True False 8291.24565084185 7784.107952053644 10695.105271492757 10566.818614140995 10182.769302348883 11255.089722251632 10679.515469809614 10349.568526683359 10976.172714225044 10915.822301542566 9390.194577899108 0.8829684605637717 0.8289613050590483 1.1389652453704107 1.1253034776309327 1.0844045049199715 1.1986002663610151 1.1373050240029179 1.1021676325048946 1.168897260133322 1.16247029930926 1.0 13.196939337499781 -5.759854767886494 24.99992931119698 1.1008028393433005 0.8559648055167409 0.7722008023530933 0.05500704387369885 18.034542874020257 284497.0189328849 0.009720087976872271 0.03405175978002671 1.7383820626869337e-06 5.759854767886494 -0.24483803382655955 DLST(ph)SPKPS(ph)PIPS(ph)PVLGR ddPTM_A549_PD325901_60min_R1 2 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 3 DLS(0.11)T(0.699)S(0.247)PKPS(0.943)PIPS(1)PVLGR;DLS(0.158)T(0.624)S(0.227)PKPS(0.991)PIPS(1)PVLGR 107.56 1.6412e-09 115319000.0 15363.099999999999 16901.1 17654.9 17981.8 18934.6 19397.4 18431.3 20294.8 16635.4 18338.3 19642.2 True False 16922.750602283537 18325.415011415607 18853.067681538185 19092.49494636916 17604.699016823874 19239.434005587464 19132.71320749436 19890.004293037397 15936.271989161807 17180.416608366137 17226.33392216472 0.9823767888598416 1.0638023792071467 1.0944329633178878 1.1083318733188665 1.0219643422894713 1.1168617822293887 1.1106665697961855 1.154627814769421 0.9251110573595106 0.9973344697713364 1.0 14.072328081978602 -8.771303893805092 24.998962825887514 0.9646357740380948 1.0825084509752783 0.49037648727285876 0.048530400522681275 114.00663968228665 288918.2619745935 0.008849631395470745 0.009477203861593312 1.6931526169444924e-09 8.771303893805092 0.11787267693718351 DLSTIEPLK ddPTM_A549_PD325901_60min_R1 2 DLSTIEPLK 9 0 P39687;H0YN26;O95626;O43423 P39687 ANP32A;ANP32D;ANP32C Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D;Acidic leucine-rich nuclear phosphoprotein 32 family member C 0 ; 102.51 5.1612e-05 768350.0 1781.8 1984.5 1592.9 1640.3 2440.1 1734.4 1708.4 1922.0 1942.0 2052.2 1972.4 False True 1962.687024308167 2151.7407796033567 1701.0037728858376 1741.6176056084116 2268.7157938880123 1720.2756214384872 1773.41409687235 1883.6642022201677 1860.3844934869144 1922.6237417693571 1729.8073040737647 1.1346275505288719 1.2439193513265447 0.9833487053037101 1.0068275243761737 1.311542498719422 0.9944897430986503 1.025209046519742 1.088944530286156 1.075486552233671 1.1114670040076151 1.0 10.756395619090032 DLSTS(ph)PKPS(ph)PIPSPVLGR ddPTM_A549_PD325901_60min_R1 1 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 2 DLS(0.259)T(0.346)S(0.404)PKPS(0.909)PIPS(0.083)PVLGR 59.211999999999996 0.0012921 10001000.0 3046.0 3461.1 3563.6 3416.8 4320.5 3298.1 3849.9 4028.5 3784.2 3737.5 3437.0 True False 3355.227677653316 3752.7790437315075 3805.4473256676315 3627.8479758841795 4017.0429849158418 3271.241367081571 3996.4100512461164 3948.148407202885 3625.16323390998 3501.5136121542605 3014.270788938111 1.1131142198525965 1.2450039517032123 1.262476927963145 1.2035574206530475 1.332674887623814 1.0852513248267213 1.3258298046453885 1.3098187534086039 1.2026667435499645 1.1616453389006232 1.0 11.557593312848573 -10.267455007030842 0.7647343232578779 1.0041167081958384 1.2355544710245028 0.23813437237695045 0.08865142501953102 0.34385983964039446 0.3808326906687243 0.043062623194526264 0.014817273313977728 5.401880754260988e-11 10.267455007030842 0.23143776282866435 DLSTS(ph)PKPSPIPS(ph)PVLGR ddPTM_A549_PD325901_60min_R1 2 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 2 DLS(0.045)T(0.431)S(0.524)PKPSPIPS(1)PVLGR;DLS(0.038)T(0.44)S(0.522)PKPS(0.001)PIPS(0.999)PVLGR 128.12 5.8649e-13 67218000.0 8635.2 8928.4 8779.7 9537.8 12303.2 10638.6 11147.7 9997.400000000001 11126.5 11049.7 12336.400000000001 True False 9511.839147101751 9680.827602222524 9375.543238625016 10126.928244084565 11439.06567573582 10551.962768816591 11571.931823755504 9797.994014191427 10658.891898446016 10352.0200562464 10819.101006882773 0.8791709349095288 0.8947903893367743 0.8665732238436992 0.9360230797033997 1.057302789617977 0.9753086473731748 1.069583490938277 0.9056199778482751 0.9851920128728962 0.9568281181274461 1.0 13.401293005627736 -6.5258876925873945 6.237891863568077 0.9945585168190156 0.8843056182834335 0.5765350170320498 0.042490741125388615 0.0712976593542506 12.043879981700112 0.005385392472591738 0.01176354049220228 2.979286765555705e-07 6.5258876925873945 -0.11025289853558218 DLSTS(ph)PKPSPIPSPVLGR ddPTM_A549_MK2206_60min_R1 1 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DLS(0.028)T(0.159)S(0.813)PKPSPIPSPVLGR 93.006 1.1987999999999999e-06 15447000.0 2225.4 3107.4 2946.9 2340.6 3214.3 2129.5 2256.3 2344.6 3894.9 3679.4 3607.4 True False 2600.9931141937154 3265.5533872214764 3364.8147322032014 2914.047105073526 2741.4807279574643 2354.8422765523023 2666.2405039797386 2676.95423003636 3012.7113688772247 2848.220984545721 2711.583020824917 0.959215740111266 1.2042977707641902 1.2409041900474647 1.0746663785300643 1.0110259235667627 0.8684381995561813 0.9832782118426953 0.9872293082960734 1.1110526012811137 1.0503904776919704 1.0 11.404919626838486 -6.510745091317642 13.796042478702821 1.0272846234381732 1.1444312521172164 0.2829483573124336 0.08766088979711667 1.8833693033037944 2136.224233688094 0.013305500340716757 0.02942713470797225 3.084998155321126e-07 6.510745091317642 0.11714662867904324 DLSTS(ph)PKPSPIPSPVLGR ddPTM_A549_PD325901_60min_R1 2 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DLS(0.016)T(0.141)S(0.842)PKPSPIPSPVLGR;DLS(0.037)T(0.154)S(0.809)PKPSPIPSPVLGR 142.04 3.3652e-17 44484000.0 7198.6 7531.9 8061.4 7305.1 9387.3 9237.9 9037.3 9065.0 9014.7 9837.099999999999 9924.7 True False 7929.396572670773 8166.639646205346 8608.495081136221 7756.319435914169 8727.968432426922 9162.669605215986 9381.219396900318 8884.191463645071 8635.8435084637 9215.983827190013 8704.024817856873 0.9110034424997387 0.9382601517232527 0.9890246479393457 0.8911187178604518 1.0027508669921215 1.0526934144785725 1.0778024641719928 1.0206992339243535 0.992166691752384 1.0588186522955247 1.0 13.087466954824327 -6.866421895263305 8.283893090471503 1.0092877990330444 0.9369753981802017 0.5833959599461722 0.036977291375187134 0.16955440245089004 12.134980306089588 0.005333547874369389 0.010108474998452561 1.3601227495772179e-07 6.866421895263305 -0.07231240085284274 DLSTSPKPSPIPS(ph)PVLGR ddPTM_A549_MK2206_60min_R1 2 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DLS(0.001)T(0.001)S(0.001)PKPS(0.01)PIPS(0.988)PVLGR;DLSTSPKPS(0.049)PIPS(0.951)PVLGR 105.92 1.393e-09 10913500.0 3836.8 4450.6 4529.6 4777.799999999999 6623.5 4398.5 4404.5 4220.4 6821.9 6985.3 6031.200000000001 True False 4484.358039246182 4677.116529950414 5171.965391084745 5948.36121448359 5649.191924097397 4863.946350512004 5204.740637228539 4818.654624432932 5276.750542335758 5407.315878498454 4533.48658734802 0.9891631866213202 1.0316820045311776 1.1408361514774479 1.312094146497351 1.2461031515705965 1.072893071766491 1.1480657407819057 1.0629025875759188 1.1639497416981506 1.1927499451722439 1.0 12.146405301275195 -10.8769728207798 0.8301058549333998 0.98849086587614 1.1355967647077794 0.0 0.10510397701465089 0.9732064479850716 1.028382425368202 0.09749134476009988 0.017213742223956406 1.3274775319494148e-11 10.8769728207798 0.14710589883163938 DLT(ph)IQK ddPTM_A549_MK2206_60min_R1 2 DLTIQK 6 0 P14868;C9JQM9;C9J7S3;H7C278;C9JLC1 P14868 DARS Aspartate--tRNA ligase, cytoplasmic 1 DLT(1)IQK;DLT(1)IQK 67.98100000000001 0.057233000000000006 3186100.0 2164.6800000000003 2260.5 2185.6 2673.2 3558.0 2571.5 2545.2 2451.8999999999996 3871.8999999999996 3157.6 3429.2 True False 2530.0250626551874 2375.5497946238493 2495.550944620896 3328.134120004509 3034.6229132540993 2843.61442317645 3007.629894397565 2799.4643336288295 2994.920832153773 2444.295966951557 2577.63499889472 0.9815296051380635 0.9216005352357786 0.9681552840844335 1.2911580271960925 1.1772896141444906 1.103187388592947 1.1668176043882184 1.086059249982728 1.1618870916316637 0.948270786205053 1.0 11.331832272734886 -6.035198403889092 24.98891595181662 1.1065546714942391 0.9498931784340977 0.3945249102577507 0.08760217580213692 447.64800403077226 317805.13456509693 0.01237848101954814 0.032766961640031025 9.221500541865635e-07 6.035198403889092 -0.15666149306014143 DLTDYLMK ddPTM_A549_MK2206_60min_R1 6 DLTDYLMK 8 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;P63267-2;Q562R1;A0A2R8YEA7;P68133;P68032;P63267;P62736 P60709;P68133 ACTB;ACTG1;ACTG2;ACTBL2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;;;; 144.38 0.00078051 163829600.0 33350.899999999994 37386.1 34502.5 30835.200000000004 49442.9 35887.8 34880.2 35343.3 52035.50000000001 47356.600000000006 48656.3 False True 38979.716568780095 39288.892801055816 39395.47331020428 38389.82538424473 42169.9149066136 39685.423175606375 41217.48084337814 40353.32100931678 40249.54233361853 36658.71116941289 36573.59786443517 1.065788405976998 1.074241942143216 1.0771560800834734 1.0496595256102952 1.1530152177787352 1.0850839264626246 1.1269736435599291 1.103345674628229 1.100508144777244 1.0023271788926318 1.0 15.158514935839364 -10.637514347852951 0.8645269433560284 0.9987473604384788 1.0934720682774388 0.619405812683955 0.02756857671146627 0.3318545381641263 0.43324310929189747 0.020095347522167475 0.005140987162596859 2.3040168566426228e-11 10.637514347852951 0.09472470783896003 DLTDYLMK ddPTM_A549_PD325901_60min_R1 6 DLTDYLMK 8 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;P63267-2;Q562R1;A0A2R8YEA7;P68133;P68032;P63267;P62736 P60709;P68133 ACTB;ACTG1;ACTG2;ACTBL2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;;;; 148.38 0.00064819 323324700.0 84691.5 82624.2 88308.8 80688.1 100561.6 94129.0 95775.5 93543.20000000001 95490.1 93810.70000000001 101582.4 False True 93289.31873341274 89587.23130365518 94301.96621195368 85672.02068102921 93498.50013468663 93362.44463237042 99420.28906286467 91677.40749277914 91476.98317276762 87887.4763921657 89088.40878388897 1.0471543942345447 1.005599185422385 1.0585211645289545 0.9616517103684359 1.0495024146350587 1.047975218177366 1.1159733395175888 1.029061005177122 1.0268112813045396 0.9865197683052518 1.0 16.44295011569805 -4.852594425260937 16.380055547613495 1.0242862272512707 6.986725783671685 0.010292325447410988 0.03941985053850617 369.3950321986234 41206.611558577286 0.0051741126332423264 319.27909402141637 1.4041243625818592e-05 4.852594425260937 5.962439556420414 DLTEYLSR ddPTM_A549_MK2206_60min_R1 1 DLTEYLSR 8 0 O14979-3;O14979-2;A0A087WUK2;O14979 O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like 0 101.54 0.0063364 1500800.0 877.78 934.86 1081.3 1032.7 1181.6 783.51 660.29 948.02 1200.9 1398.0 1308.9 False True 1025.927804339427 982.4403808900917 1234.644599386244 1285.711546359664 1007.7882052560556 866.4205081481541 780.2561460678014 1082.4047381894868 928.8980674432356 1082.1908290468323 983.8640061977422 1.0427536711138008 0.9985530263342468 1.2548935539960169 1.3067980312934173 1.0243165710988567 0.8806303540837292 0.7930528418080794 1.1001568625043687 0.9441325849830314 1.0999394451160842 1.0 9.942315103771039 -6.9875809750264395 24.57829282390609 0.9622812618359586 1.1495973021378483 0.3516428786566056 0.11483029687811339 149.27355785687217 295422.46257371653 0.015777861772715947 0.029802836227791698 1.0290086487008046e-07 6.9875809750264395 0.18731604030188964 DLTGQVPT(ph)PVVK ddPTM_A549_MK2206_60min_R1 2 DLTGQVPTPVVK 12 0 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLTGQVPT(1)PVVK;DLT(0.001)GQVPT(0.999)PVVK 83.617 0.00058286 4726200.0 3486.3 4172.700000000001 3991.5 4035.9 4671.1 4628.3 3527.6000000000004 4092.8999999999996 5830.3 5819.7 6583.5 True False 4074.702208148445 4385.072606957283 4557.554719735681 5024.695681178436 3983.9873777687535 5118.063633983108 4168.519258005992 4673.081108980557 4509.74635907594 4505.025728042813 4948.63525464347 0.8233991794656953 0.8861175619768344 0.9209720428393212 1.0153699803321725 0.8050678970591831 1.0342373948818835 0.8423573457135543 0.9443171437207154 0.9113111245861764 0.9103571987479976 1.0 12.272814995141545 -14.999999999999783 0.17980044551819016 1.374552320025846 0.8906642852609465 0.01553349232937784 0.07264121589608391 58.16694013113897 0.6456719985364852 7.680182340674881 0.07114631284054244 1.000000000000499e-15 14.999999999999783 -0.4838880347648995 DLTGQVPT(ph)PVVK ddPTM_A549_PD325901_60min_R1 2 DLTGQVPTPVVK 12 0 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLT(0.001)GQVPT(0.999)PVVK;DLTGQVPT(1)PVVK 111.39 7.102100000000001e-05 20098200.0 5691.9 5388.9 5862.8 6456.5 7626.8 7336.3 7123.7 6704.0 8083.1 7191.6 7642.6 True False 6269.737497844686 5843.0415153461945 6260.684863880404 6855.303341224601 7091.11987903163 7276.555605142513 7394.796301738218 6570.283460813742 7743.395416737431 6737.521148673865 6702.608650433051 0.935417510529964 0.8717563295253229 0.9340668969947852 1.022781382407234 1.0579641821357835 1.0856303843239274 1.1032713809511234 0.9802576583953235 1.1552808496788987 1.0052087925853406 1.0 12.710506985392934 -6.330875667794899 2.0849301680783654 1.070199405417329 0.9014527167107129 0.5942229121610343 0.050553378076970676 0.17961350849994662 1.502015796794048 0.008761464821189573 0.02651078819721928 4.6679299724531353e-07 6.330875667794899 -0.16874668870661602 DLTNNNIPHLLS(ph)PK ddPTM_A549_MK2206_60min_R1 4 DLTNNNIPHLLSPK 14 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 DLTNNNIPHLLS(1)PK;DLTNNNIPHLLS(1)PK;DLTNNNIPHLLS(1)PK;DLTNNNIPHLLS(1)PK 124.26 3.012e-07 59644400.0 5381.530000000001 5630.7300000000005 5670.0 4933.5 7921.139999999999 5166.469999999999 4603.87 4972.08 8095.829999999999 6985.38 8714.48 True False 6289.80069822365 5917.310106207629 6474.091259151028 6142.2077214732335 6755.950799070706 5713.182426174774 5440.33358554146 5676.8875663563895 6262.137431383935 5407.3778064428925 6550.434108587445 0.9602112766813254 0.9033462528002828 0.9883453755627687 0.9376794911074615 1.0313745145858095 0.8721837868248983 0.8305302359135751 0.866642954077523 0.9559881570557957 0.8254991526979814 1.0 12.67737480437375 -9.38843367375393 1.7869234941683476 0.9869206714887726 0.9251193741155825 0.0 0.07336692628691943 0.4025592536740258 2.628690880800595 0.012817368617949949 0.010964753805529071 4.0885218799583746e-10 9.38843367375393 -0.06180129737319007 DLTNNNIPHLLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DLTNNNIPHLLSPK 14 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 DLTNNNIPHLLS(1)PK;DLTNNNIPHLLS(1)PK 122.57 4.7742e-07 51508000.0 2733.2200000000003 2712.13 2760.29 2446.15 3875.1 3025.2 2736.32 3792.7 4676.8 5278.7 5531.1 True False 3010.694482309783 2940.6907133210625 2947.6198783721816 2597.2431298902748 3602.9263443692585 3000.563774201864 2840.452154971759 3717.05162318441 4480.250360010094 4945.40198113142 4850.809764531738 0.6206581227578636 0.6062267654408697 0.6076552207684284 0.5354246519582888 0.7427474007975364 0.6185696656548881 0.5855624715981735 0.7662744580013904 0.9236087534846018 1.0195002940109759 1.0 12.244009886757544 -8.63016113350948 1.9308622651295198 0.9701210158458734 0.6163607640307578 0.9064129440443651 0.051277723101865624 0.06414052566121665 0.4704836231412338 0.009346344791978661 0.010556087802508742 2.3433592123975822e-09 8.63016113350948 -0.3537602518151156 DLTSLETTSEMEAGS(ph)PENKK ddPTM_A549_PD325901_60min_R1 2 DLTSLETTSEMEAGSPENKK 20 1 Q5VYS8-4;Q5VYS8-6;Q5VYS8;Q5VYS8-5;Q5VYS8-3;Q5VYS8-2 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 DLTSLETTSEMEAGS(1)PENKK;DLTSLETTSEMEAGS(1)PENKK 145.25 1.5729e-21 40224000.0 11604.7 11391.2 12573.3 11413.5 14400.599999999999 12087.599999999999 11759.1 12526.2 13448.3 12776.400000000001 12204.6 True False 12782.80060107138 12351.176401419882 13426.599747395008 12118.485973060793 13389.151535373016 11989.16259323101 12206.598985326422 12276.355114386193 12883.114718723009 11969.695923565941 10703.511571333736 1.1942623237131278 1.1539368476509093 1.2544107284710446 1.1321972132507108 1.2509120437849566 1.120114881301247 1.1404293725452002 1.146946498125425 1.2036343991281058 1.1182961632538722 1.0 13.385796568271134 -10.875494591957318 0.7051360190904453 0.975049141386872 1.179609066815406 0.32913680458422323 0.05542319231774627 0.4176643748636138 0.2924135752346952 0.053057992852523835 0.008037322102307677 1.3320036289563888e-11 10.875494591957318 0.20455992542853396 DLVAQAPLKPKT(ph)PR ddPTM_A549_PD325901_60min_R1 1 DLVAQAPLKPKTPR 14 2 O94776;O94776-2 O94776 MTA2 Metastasis-associated protein MTA2 1 DLVAQAPLKPKT(1)PR 69.125 0.0055428000000000005 4405100.0 2376.1 2379.9 2313.4 2613.0 3051.2 3425.8 2598.5 3385.2 3177.9 3092.3 2728.4 True False 2617.319922807632 2580.4625252597766 2470.4012356043045 2774.3990754464307 2836.8942380685617 3397.9014206203683 2697.387339453761 3317.6795303619747 3044.343914444939 2897.0516502647797 2392.8240967526153 1.0938204468768464 1.0784171426398672 1.0324207445741507 1.159466372480812 1.1855841145693113 1.4200381153097623 1.1272819189318926 1.3865120862266946 1.272280699018588 1.2107248728381117 1.0 11.22449862885555 -6.3715152244855835 5.40913572734606 1.1765883945995466 1.0697415782611632 0.1913634650556607 0.11657606922919507 0.43451017888276144 18.042056061325027 0.02060308684013976 0.048706022688507086 4.2509380459377045e-07 6.3715152244855835 -0.10684681633838333 DLVDEDLSHFQS(ph)GSPPAPNGFK ddPTM_A549_PD325901_60min_R1 1 DLVDEDLSHFQSGSPPAPNGFK 22 0 Q70EK8 Q70EK8 USP53 Inactive ubiquitin carboxyl-terminal hydrolase 53 1 DLVDEDLSHFQS(0.5)GS(0.5)PPAPNGFK 126.45 1.1516e-16 6995300.0 1713.0 1655.0 1784.5 1892.1 2161.1 1442.6 1492.2 1754.0 1653.3 2163.8 1809.4 True False 1886.9024989560517 1794.4726582230041 1905.606901070236 2008.9707197291198 2009.3117913902618 1430.851943892506 1548.9864875631717 1719.015094013618 1583.8175505056206 2027.1772987235831 1586.8552707316308 1.189082920010772 1.1308357424402353 1.200870007629393 1.2660075287161316 1.2662224642981175 0.9016902614142004 0.9761359565255127 1.0832841064459862 0.9980856979952497 1.2774808995586213 1.0 10.631954837712764 -7.254950344177851 24.99989082934146 0.9980894495672135 1.2087094078682417 0.3915069812846175 0.09917749429606566 177.33879081202923 683221.5020348954 0.007902999556121944 0.013484809151996688 5.5596782119352655e-08 7.254950344177851 0.2106199583010282 DLVDEDLSHFQSGS(ph)PPAPNGFK ddPTM_A549_MK2206_60min_R1 2 DLVDEDLSHFQSGSPPAPNGFK 22 0 Q70EK8 Q70EK8 USP53 Inactive ubiquitin carboxyl-terminal hydrolase 53 1 DLVDEDLSHFQS(0.031)GS(0.969)PPAPNGFK;DLVDEDLSHFQS(0.026)GS(0.974)PPAPNGFK 175.47 6.7562e-41 8131000.0 1628.0900000000001 2272.1800000000003 1726.25 1712.23 3046.3 2288.5 2335.43 2994.1 3363.7 3700.9 3651.3999999999996 True False 1902.871789021142 2387.8242567345355 1971.0582074267127 2131.7264268649265 2598.1933054092083 2530.6675510166456 2759.747400704427 3418.52284404669 2601.827320725134 2864.864119613322 2744.6566064866943 0.6933004968723276 0.8699901660160966 0.7181438300034814 0.7766823805305281 0.9466369305612454 0.922034306599846 1.0054982449105172 1.245519325065069 0.9479609633409153 1.0437969226614836 1.0 11.42240994459974 -6.891762895240877 1.9302853602459649 0.9975930177374563 0.7636282548075699 0.6386901087211387 0.0908802482529233 0.18668992776319315 1.4066144098610156 0.013849773118993963 0.030278152948453537 1.2830308671621115e-07 6.891762895240877 -0.23396476292988644 DLVDEDLSHFQSGS(ph)PPAPNGFK ddPTM_A549_PD325901_60min_R1 1 DLVDEDLSHFQSGSPPAPNGFK 22 0 Q70EK8 Q70EK8 USP53 Inactive ubiquitin carboxyl-terminal hydrolase 53 1 DLVDEDLSHFQS(0.34)GS(0.66)PPAPNGFK 151.06 7.013899999999999e-28 6603900.0 1376.3 1962.4 2801.6 2287.3 2172.9 2553.4 2002.7 2353.8 2510.1 2079.4 2829.8 True False 1516.02096282149 2127.778335043399 2991.7334233893935 2428.5813261648004 2020.2830000980534 2532.6059569770728 2078.9138444194896 2306.8516124796206 2404.609226107882 1948.1063291273767 2481.7525395801745 0.6108670943791792 0.8573692586624064 1.2054922381163313 0.9785751348825581 0.8140549744092594 1.0204909299319185 0.8376797489934951 0.9295252349655534 0.9689157914651142 0.7849720300707048 1.0 11.277143553345914 -5.363419066623663 3.7849969010203752 0.9742360865646985 0.6056603583701597 0.4084088128165665 0.11325451790725795 0.12522504562169262 2.8662296254656265 0.012756251019840334 0.10191476914389198 4.330927696481931e-06 5.363419066623663 -0.36857572819453877 DLVDS(ph)VDDAEGLYVAVER ddPTM_A549_PD325901_60min_R1 2 DLVDSVDDAEGLYVAVER 18 0 Q6ZNE5 Q6ZNE5 ATG14 Beclin 1-associated autophagy-related key regulator 1 DLVDS(1)VDDAEGLYVAVER;DLVDS(1)VDDAEGLYVAVER 243.09 1.1424999999999998e-74 11745800.0 2027.1100000000001 2335.18 2448.31 2604.24 2660.2 2477.17 2588.8 2469.2 2650.13 2645.8 2671.8 True False 2232.900714920491 2531.9738139149235 2614.467039484039 2765.097990141833 2473.3567291917884 2456.996748823095 2687.3182006457173 2419.949868950072 2538.754252175324 2478.7437364649477 2343.1855379356525 0.9529338068925081 1.0805690684424392 1.1157746568320772 1.1800593445868934 1.0555530875164145 1.0485711477153066 1.146865306711156 1.0327606712194242 1.0834627523401188 1.0578520976400025 1.0 11.194255478752972 -10.715062600521188 0.6042489219086542 0.9884344480999927 1.0828869304569486 0.054184086417737753 0.05951482378470251 1.4005754291432133 0.7337132810962327 0.07238205362461804 0.011996672274062472 1.9272470939388564e-11 10.715062600521188 0.09445248235695591 DLVLPTQALPAS(ph)PALK ddPTM_A549_MK2206_60min_R1 2 DLVLPTQALPASPALK 16 0 Q15554;J3KSZ6;U3KQ35;H3BR06 Q15554 TERF2 Telomeric repeat-binding factor 2 1 DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK 177.44 1.9179e-28 28006000.0 7114.5 7972.2 8180.9 6981.9 12283.0 7501.4 8476.6 8682.6 12424.0 13184.0 12241.0 True False 8315.253667174973 8377.950927980652 9341.074635271358 8692.465813429395 10476.186971191712 8295.193168973678 10016.688497112376 9913.385139347314 9609.983837051184 10205.725243314337 9201.221865586798 0.9037118970334356 0.9105259117068749 1.0151993693585 0.9447077725557096 1.1385647606622085 0.9015316976540115 1.0886259068021693 1.0773987720504876 1.0444247489556995 1.1091706506376562 1.0 13.167609739568086 -5.765508846087105 1.2783931440718879 1.0273654994254686 0.8829288468912556 0.34750322264280475 0.06695234265447075 0.5422832969080917 1.2955253978017585 0.008388563479186152 0.08049561753389002 1.7158967588899407e-06 5.765508846087105 -0.144436652534213 DLVLPTQALPAS(ph)PALK ddPTM_A549_PD325901_60min_R1 2 DLVLPTQALPASPALK 16 0 Q15554;J3KSZ6;U3KQ35;H3BR06 Q15554 TERF2 Telomeric repeat-binding factor 2 1 DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK 282.67 4.121399999999999e-107 340630000.0 61569.0 62572.0 60781.0 61799.0 77046.0 68438.0 68785.0 69621.0 69741.0 72839.0 76175.0 True False 67819.43955529777 67845.16203645307 64905.96416584475 65616.18387428789 71634.55475427065 67880.6636185466 71402.65081559628 68232.35453838199 66810.02830086047 68239.93310921857 66805.95791311034 1.0151705278068999 1.0155555605488713 0.9715595164470694 0.9821905998209037 1.0722779373576308 1.0160869739617244 1.0688066311161128 1.0213513385606545 1.000060928514122 1.0214647801019978 1.0 16.027689150937483 DLVMGS(ph)SPQLK ddPTM_A549_PD325901_60min_R1 1 DLVMGSSPQLK 11 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.895)S(0.105)PQLK 147.66 1.6140999999999998e-11 11910000.0 7236.7 7682.3 6941.2 6416.9 7402.8 7670.0 7599.5 6885.8 7403.6 7077.6 8058.1 True False 7971.364456623027 8329.714382034199 7412.271572826399 6813.257339162723 6882.852866273578 7607.538062980391 7888.703131105965 6748.457317194399 7092.452438712524 6630.719128129229 7067.004784504562 1.1279693023699948 1.1786767712819881 1.0488561701668697 0.9640940606268985 0.9739420130810207 1.076486898616657 1.1162725046405935 0.9549246849232896 1.003600910850345 0.938264417574479 1.0 12.786883170398626 -5.892370940045632 4.516786752708935 1.0078646658618413 1.1522056619773782 0.5543957541523282 0.051132323456132285 0.10492182989352726 3.654976370630386 0.006467291450883358 0.021609999280063196 1.2812357847629725e-06 5.892370940045632 0.14434099611553686 DLVMGS(ph)SPQLKR ddPTM_A549_MK2206_60min_R1 1 DLVMGSSPQLKR 12 1 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.5)S(0.5)PQLKR 47.532 0.014736 29829000.0 1682.0 2105.7 1467.0 1574.5 2591.8 1985.1 1770.5 1351.7 2836.5 2515.9 2757.7 True False 1965.8804790481845 2212.8711358281093 1675.0426591136775 1960.2525706819906 2210.5496533367 2195.1619643972645 2092.1769322767927 1543.3076144076385 2194.0372789597295 1947.556442631564 2072.886981351909 0.948378033502851 1.0675310114519145 0.8080723523195833 0.945663023752284 1.0664110842623022 1.0589877712317963 1.0093058382335456 0.7445208678965768 1.058445201642787 0.9395381707503387 1.0 11.017425744144619 DLVMGS(ph)SPQLKR ddPTM_A549_PD325901_60min_R1 1 DLVMGSSPQLKR 12 1 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.5)S(0.5)PQLKR 106.13 6.3374e-05 27486000.0 2489.5 2231.3 1875.7 2508.8 2830.7 3141.9 3166.8 2700.2 2369.2 2687.5 2810.2 True False 2742.2322073269643 2419.33948174803 2002.9962815003855 2663.7628781018007 2631.8813973848573 3116.3134080936247 3287.3143069394514 2646.342392734078 2269.630763114933 2517.8107913483805 2464.563215325539 1.1126645850570112 0.9816504063290842 0.8127185657259814 1.080825544071082 1.0678895883127986 1.264448559775326 1.3338324156174004 1.0737571575677876 0.9209058826333014 1.0216052790578585 1.0 11.2671162708516 -8.68851583836354 6.973674625974006 0.9627633952693014 1.0914717387050377 0.12096377351326115 0.1301410033212497 0.32252165245884 25.44806802895937 0.024183964338161713 0.027377740053830976 2.0487273331896437e-09 8.68851583836354 0.12870834343573623 DLVMGSS(ph)PQLK ddPTM_A549_MK2206_60min_R1 2 DLVMGSSPQLK 11 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.026)S(0.974)PQLK;DLVMGS(0.074)S(0.926)PQLK 130.44 9.365500000000001e-08 17071000.0 5910.5 7231.400000000001 7006.8 5473.6 8712.1 6192.3 6680.9 6843.9 9294.9 8988.2 9526.400000000001 True False 6908.047902148808 7599.447372193282 8000.469600461978 6814.632245719244 7430.561630849088 6847.5650758839265 7894.7330510296615 7814.0437835647235 7189.6199909052675 6957.759377423992 7160.73196473541 0.964712537233484 1.0612668383090476 1.1172698042409686 0.9516669914862601 1.0376818553525693 0.95626607860848 1.1025036392800345 1.091235340471713 1.0040342281085401 0.9716547710051151 1.0 12.80589135091142 -8.953660151988467 24.999690569557472 1.0017796525989058 1.0365541998370251 0.10038205551237867 0.05575129130683159 244.04457364450485 131659.05192155493 0.00926621656599519 0.009861422734136477 1.1126020300339092e-09 8.953660151988467 0.03477454723811935 DLVMGSS(ph)PQLK ddPTM_A549_PD325901_60min_R1 2 DLVMGSSPQLK 11 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.259)S(0.741)PQLK;DLVMGS(0.17)S(0.83)PQLK 107.53 4.8618999999999996e-05 31494000.0 22699.0 22049.0 23751.0 23329.0 27198.0 24378.0 23942.0 25377.0 22688.0 27787.0 27440.0 True False 25003.385769879398 23907.146610972224 25362.885686365466 24769.979345996853 25287.70630800629 24179.47365050015 24853.125911565097 24870.835827128612 21734.50225964528 26032.52407784091 24065.05395649163 1.0389914693349214 0.9934383132568539 1.0539301400370948 1.0292924915431185 1.0508061338123387 1.0047545995207567 1.0327475665127641 1.0334834848944778 0.9031561823605355 1.0817563145674374 1.0 14.55465203753645 -8.73594068806818 24.983873422809026 0.9542681958550224 1.0292434156102066 0.0 0.04674732668469257 142.0926503416284 139223.7392668888 0.006212938670898508 0.007043520922973811 1.8367891779320635e-09 8.73594068806818 0.07497521975518417 DLVMGSS(ph)PQLKR ddPTM_A549_MK2206_60min_R1 1 DLVMGSSPQLKR 12 1 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.088)S(0.912)PQLKR 67.275 0.0020280999999999997 31731000.0 1404.7 1637.0 1411.6 1411.6 1986.3 1602.3 1178.5 1461.0 2603.9 2269.4 2392.2 True False 1641.7790183822738 1720.3163078076711 1611.7861060701211 1757.4420633691318 1694.1179012356997 1771.854322479341 1392.6181952489128 1668.1012241248488 2014.120807573856 1756.740963833248 1798.1507186387341 0.9130374897745838 0.956714189737117 0.8963576241764106 0.9773608213996543 0.9421445508851499 0.9853758665017243 0.7744724515101691 0.9276759766765617 1.1201067778671072 0.9769709210822801 1.0 10.81229823539187 -8.738767857120147 21.749539503698358 1.056717043076408 0.9217278766847007 0.3577427800802252 0.06383231952922354 34.1803338174125 32789.92495560794 0.01122518469773228 0.012719607115719282 1.8248708875904876e-09 8.738767857120147 -0.13498916639170722 DLVMGSS(ph)PQLKR ddPTM_A549_PD325901_60min_R1 1 DLVMGSSPQLKR 12 1 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.186)S(0.814)PQLKR 48.467 0.013908000000000002 25817000.0 1780.6 1623.6 1268.4 1786.1 1897.6 1945.8 1540.3 1797.8 1841.3 1700.8 1550.8 True False 1961.3652011915615 1760.4264700246952 1354.481251508818 1896.4233404725878 1764.3191223646127 1929.9540499279337 1598.9169593845008 1761.941468653184 1763.9165642932333 1593.4111977396558 1360.0614313311662 1.44211515451318 1.2943727610168827 0.9958971119290645 1.3943659431739455 1.2972348761024548 1.4190197629815755 1.175621131921632 1.2954866802808134 1.2969388908902386 1.1715729606272987 1.0 10.409456101340092 -10.689207324283599 0.6802602591053272 0.9722903787612649 1.2890880878129387 0.2387772376224936 0.12710165805873067 0.6589762398547349 0.4679012560341552 0.12140014522259511 0.023038767101506652 2.045467934439008e-11 10.689207324283599 0.3167977090516738 DLVQPDKPAS(ph)PK ddPTM_A549_MK2206_60min_R1 4 DLVQPDKPASPK 12 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;G3V411;G3V4R5 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK 172.1 8.175599999999999e-16 595494500.0 14679.900000000001 15945.0 16439.8 13392.6 19774.0 15016.5 14747.900000000001 16000.8 22545.300000000003 21899.100000000002 21389.5 True False 17157.508230903364 16756.53239339849 18771.210843419944 16673.787601216656 16865.270794459408 16605.536062854026 17427.402530090327 18268.962400394863 17438.825547446082 16952.078100414525 16077.896829831632 1.0671487951750365 1.0422092249222354 1.1675165627752393 1.0370627313815934 1.0489724478867688 1.0328176774989244 1.0839354621155899 1.1362781210598287 1.08464594169365 1.0543716183674532 1.0 13.972791077632252 -10.627632958978458 0.9570650563594156 1.0010177303151755 1.077582196820092 0.13237869717658346 0.04270771770378708 0.4998569593370217 0.8326748106111441 0.02525152312820533 0.007217379221105733 2.3570404790519625e-11 10.627632958978458 0.07656446650491655 DLVQPDKPAS(ph)PK ddPTM_A549_PD325901_60min_R1 4 DLVQPDKPASPK 12 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;G3V411;G3V4R5 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK 133.86 1.3380000000000001e-08 866270000.0 42937.2 40751.3 45260.4 42737.4 52396.0 50393.0 47045.6 48840.0 46927.7 45176.0 51319.1 True False 47296.15293530402 44185.5550676998 48332.04291689509 45377.19213432237 48715.88571638715 49982.61611574592 48835.9460523401 47865.84788576119 44955.49196447264 42323.57965021563 45007.17603857833 1.0508580430543715 0.9817446673353986 1.0738741501014597 1.0082212688800312 1.082402630074588 1.1105477062791687 1.0850702121475009 1.0635159123232376 0.9988516481447006 0.9403740331083553 1.0 15.457867425655927 -8.765018099829277 24.926564598288138 0.9994577181530446 1.0570188157216742 0.42280518754057483 0.038375859701159434 70.92517926745529 494008.3564269791 0.006072049667047882 0.006592306942332406 1.7178367924174162e-09 8.765018099829277 0.05756109756862959 DLYANTVLSGGTTMYPGIADR ddPTM_A549_MK2206_60min_R1 6 DLYANTVLSGGTTMYPGIADR 21 0 P60709;P63261;A0A2R8Y793 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;;; 268.55 1.6881999999999997e-111 52284200.0 6796.46 7376.52 7032.0599999999995 6811.9 9513.6 7224.860000000001 7246.61 7474.59 11419.7 10989.3 10402.099999999999 False True 7943.5362905064385 7751.9533603356485 8029.311848293749 8480.815805797807 8114.1620425897145 7989.389889726074 8563.225235360815 8534.136022471843 8833.156183513638 8506.80949759968 7818.97148664492 1.0159310983643155 0.991428779805152 1.0269012826057873 1.0846459563490338 1.0377531183543756 1.0217955012845659 1.0951856327890575 1.0914652952819242 1.1297081973762126 1.0879703950998685 1.0 12.932763131490788 -6.046595098561656 4.736372116257989 1.0637359397802 1.0043577349138573 0.34282903292536937 0.035613085501398266 0.24846375749383715 12.492021632903002 0.006932187365821098 0.019956805377269467 8.982658754818961e-07 6.046595098561656 -0.05937820486634271 DLYANTVLSGGTTMYPGIADR ddPTM_A549_PD325901_60min_R1 6 DLYANTVLSGGTTMYPGIADR 21 0 P60709;P63261;A0A2R8Y793 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;;; 372.64 4.6879999999999963e-284 109481000.0 14501.77 13949.4 15267.269999999999 16002.3 17420.6 17043.2 16658.9 18106.8 19552.9 17659.6 18111.2 False True 15973.97901476117 15124.964893423556 16303.398751752637 16990.72572713984 16197.037153807412 16904.405829854953 17292.86355559986 17745.6456694902 18731.159610041355 16544.5698421938 15883.6372163561 1.0056877273872786 0.9522356049437275 1.0264272930487413 1.069699936840897 1.019730993171299 1.0642654197898527 1.0887218915949939 1.1172280900004883 1.1792739506007497 1.041610911709637 1.0 13.955253694621609 -6.389115945724808 0.8561287197084493 1.0881505679525592 0.9739503825074138 0.36555541150697224 0.04734618893541644 0.8383562563561403 0.9959555026827395 0.011079852826108742 0.0623692640021387 4.0821038985667145e-07 6.389115945724808 -0.11420018544514532 DLYDAGVK ddPTM_A549_MK2206_60min_R1 1 DLYDAGVK 8 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2 Annexin A2;Annexin 0 133.55 0.0029863000000000003 22358000.0 9704.1 10805.0 9793.8 9643.8 12776.0 9843.9 9199.3 10318.0 14001.0 13082.0 14369.0 False True 11341.914837533592 11354.92834811356 11182.708108266894 12006.531432926637 10896.667324264863 10885.574964148027 10870.693732332056 11780.608097549759 10829.795855002707 10126.767114156413 10800.780735774588 1.0501013875753118 1.0513062551583436 1.0353610893356326 1.1116355128993902 1.008877746047809 1.0078507499085303 1.0064729576748004 1.0907181976697078 1.0026863909135768 0.9375958425500027 1.0 13.398847981097415 -8.11111537075049 0.3710511588844357 0.9955752071094766 1.0597131121671282 0.3264211635340579 0.03740140865308674 1.1645904317474511 0.39662642345621874 0.016259990873690566 0.026428644923141675 7.742560885991492e-09 8.11111537075049 0.0641379050576516 DLYDAGVK ddPTM_A549_PD325901_60min_R1 2 DLYDAGVK 8 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2 Annexin A2;Annexin 0 ; 141.47 0.0029178 78171000.0 37838.0 38112.0 36668.0 36244.0 44652.0 38711.0 37953.0 37291.0 40776.0 41578.0 41957.0 False True 41679.2859051366 41323.83199407561 39156.51098259644 38482.709563903736 41515.79756103746 38395.75045059116 39397.32218367851 36547.20175077641 39062.32652235964 38952.75798425411 36796.5549873367 1.1326953275783633 1.1230353495944647 1.0641352429886957 1.0458237076038046 1.1282522935998998 1.0434604669867822 1.0706796382769215 0.9932234624505989 1.0615756430405698 1.0585979583594023 1.0 15.167283082371508 -2.0000000000008082 0.1136438974046093 0.9819022023232691 1.415680025335099 0.44855520845106034 0.03339198595460992 49.60965892366789 0.37798089760375636 0.13177584935927836 3.4050282064439394 0.00999999999998139 2.0000000000008082 0.4337778230118299 DLYDAGVKR ddPTM_A549_MK2206_60min_R1 2 DLYDAGVKR 9 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2 Annexin A2;Annexin 0 ; 55.567 0.017578 23687000.0 4145.5 4051.0 4007.8 3728.6 5664.700000000001 4292.1 4133.9 3821.1 6530.1 5288.9 5535.3 False True 4845.159052255795 4257.17859678001 4576.166304836945 4642.107167383212 4831.430133982716 4746.287173134605 4884.976119931675 4362.752626627968 5051.042776426911 4094.133816699422 4160.732243491758 1.1644967204593908 1.0231801393706874 1.099846382086954 1.1156947613354413 1.1611970805235228 1.1407336246062878 1.1740664464945525 1.0485540456135365 1.2139792903827882 0.9839935802414324 1.0 12.022621733963799 -4.910192782444179 19.166431553956755 1.107109287996446 4.185267953935253 0.0505227795460389 0.072104532342967 837.7790037949615 181978.59798304347 0.010795244183287235 1987.3345614003788 1.2297227781789857e-05 4.910192782444179 3.0781586659388074 DLYDAGVKR ddPTM_A549_PD325901_60min_R1 2 DLYDAGVKR 9 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2 Annexin A2;Annexin 0 ; 114.86 0.00021459999999999998 43591000.0 11533.3 11937.2 11894.099999999999 13858.0 13749.3 16701.5 15655.099999999999 14927.699999999999 15870.0 14611.8 16610.8 False True 12704.15212563329 12943.189737607043 12701.305151033604 14713.977186198477 12783.596600509984 16565.488521364674 16250.86339729942 14629.955312945885 15203.039089411606 13689.208454334615 14567.776904536857 0.8720721225265898 0.8884807766088272 0.8718766929412561 1.010035867697568 0.8775255609885662 1.1371322220211697 1.1155348893514698 1.0042682153094797 1.0436073526549483 0.9396909730318133 1.0 13.83049311326577 -6.624152492020236 1.340182875581331 1.0318680302160004 0.8775878025307668 0.4624549568466808 0.0673427106563481 0.26920053771040264 0.9472432910412165 0.009380111098842464 0.028562270608434876 2.3760058630551691e-07 6.624152492020236 -0.15428022768523353 DLYPFTVNT(ph)SNQGSR ddPTM_A549_PD325901_60min_R1 2 DLYPFTVNTSNQGSR 15 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 DLYPFTVNT(0.751)S(0.224)NQGS(0.025)R;DLYPFTVNT(0.734)S(0.25)NQGS(0.016)R 136.81 1.0515e-09 9120900.0 6977.1 6936.6 7249.3 7483.6 8950.3 7299.2 7730.3 8026.1 7081.3 8007.4 9567.2 True False 7685.410055730455 7521.17162599982 7741.28109158221 7945.844975511259 8321.661804858759 7239.757735242045 8024.480796682473 7866.013139146354 6783.6975868840855 7501.811397448567 8390.495051477652 0.9159662223240302 0.8963918791269968 0.9226250708793269 0.9470055016732194 0.9917962830325762 0.8628522740105841 0.9563775137760531 0.9374909455147189 0.8084978949709776 0.8940844790948802 1.0 13.034540218955518 DMAIATGGAVFGEEGLTLNLEDVQPHDLGK ddPTM_A549_MK2206_60min_R1 1 DMAIATGGAVFGEEGLTLNLEDVQPHDLGK 30 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 96.351 1.5383e-09 2025500.0 237.37 190.94 294.12 224.93 270.81 266.19 388.56 233.94 463.71 0.0 244.75 False True 277.43225286068235 200.65803042931998 335.83063864929466 280.03786009749126 230.97420773983777 294.3580491173786 459.1563223978936 267.1017114112026 358.68042539270806 0.0 183.97182024363775 1.508014936707551 1.090699815676033 1.8254460830172092 1.5221780146906805 1.2554868861652495 1.6000170500436102 2.4957970290766442 1.4518620898432932 1.9496487283633983 0.0 1.0 7.52334098916444 -5.751536285123082 24.9829067305071 1.5478563348100067 1.2993575533327348 0.0 0.6043961449338289 584.9003568699978 1475518.1022451776 0.062494586212212815 0.23622649111335534 1.7719999890891307e-06 5.751536285123082 -0.2484987814772719 DMDEPS(ph)PVPNVEEVTLPK ddPTM_A549_MK2206_60min_R1 5 DMDEPSPVPNVEEVTLPK 18 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK 116.35 1.7792e-10 32914100.0 6176.599999999999 6600.91 6649.200000000001 6172.2699999999995 9220.2 7390.459999999999 6753.23 7199.91 10264.5 8066.799999999999 8233.32 True False 7219.059076628427 6936.868124233803 7592.156543271073 7684.476427083729 7863.9207939250855 8172.513571809689 7980.204475774982 8220.51929129962 7939.607139038304 6244.5042773640835 6188.759415927874 1.1664791909746715 1.1208818533776799 1.226765500648047 1.2416828496041323 1.2706780576549614 1.3205414886182634 1.2894675555227604 1.3282984098788282 1.2829077049924273 1.0090074371436608 1.0 12.595434523848855 -10.68446351752889 0.9413462584702118 0.9996238109198117 1.2514024770198606 0.7110763159312639 0.059962079194951126 0.2757760931925658 0.4337886606854188 0.046624490579580145 0.01222315625166732 2.0679330892623806e-11 10.68446351752889 0.25177866610004895 DMDEPS(ph)PVPNVEEVTLPK ddPTM_A549_PD325901_60min_R1 5 DMDEPSPVPNVEEVTLPK 18 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(0.999)PVPNVEEVT(0.001)LPK;DMDEPS(1)PVPNVEEVTLPK 199.08 1.2641999999999999e-48 58293200.0 9985.8 10844.11 10681.32 10551.720000000001 12887.470000000001 10288.32 10972.830000000002 11381.5 12368.719999999998 11509.59 12811.999999999998 True False 10999.551064842575 11757.981207107356 11406.218607195022 11203.47577970517 11982.298566557898 10204.53533300162 11390.407050212974 11154.48705388598 11848.905711782421 10782.872523161086 11236.205221959572 0.9789382489513017 1.046437028769112 1.0151308544011979 0.9970871444933707 1.0664008292710951 0.9081834241562535 1.0137236571606967 0.9927272449675549 1.054529129516557 0.9596542880943015 1.0 13.455867259250958 -8.722304192358935 24.999878667160147 1.0257499234663028 1.003428274686311 0.0 0.044460651727820315 368.87127850631305 235637.91287414593 0.006808615506371041 0.00772021524555765 1.8953778789295243e-09 8.722304192358935 -0.022321648779991765 DMES(ph)PTK ddPTM_A549_MK2206_60min_R1 2 DMESPTK 7 0 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.999)PT(0.001)K;DMES(0.994)PT(0.006)K 59.8 0.010445999999999999 42976000.0 3524.7000000000003 3761.1 2895.5 2724.8999999999996 4587.2 4043.3 3523.4 3748.2 5214.299999999999 4613.7 4715.4 True False 4119.583189358586 3952.523925043029 3306.125439307193 3392.5006223254068 3912.428956627094 4471.15932227468 4163.556172371675 4279.51882838108 4033.269375526076 3571.4619656461878 3544.4360415805913 1.16226760506631 1.1151347855272504 0.9327648744461116 0.9571341061108748 1.1038226986548758 1.2614585987227545 1.1746738052339056 1.207390619601275 1.137915687632918 1.007624886935058 1.0 11.791340381875983 -5.52121646949166 24.99029806006514 1.0830096175242572 1.1504844496121232 0.04509267724063626 0.10013412864483782 148.6938583976156 2235336.0828484935 0.015208400153276326 0.06077957227680248 3.0115045974133922e-06 5.52121646949166 0.06747483208786598 DMES(ph)PTK ddPTM_A549_PD325901_60min_R1 2 DMESPTK 7 0 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.894)PT(0.106)K;DMES(0.975)PT(0.025)K 56.431999999999995 0.013350999999999998 52174000.0 7730.0 7537.700000000001 8200.099999999999 6980.200000000001 8513.2 6733.0 7101.6 6740.7 7580.799999999999 7991.200000000001 8204.0 True False 8514.743909474766 8172.928432560449 8756.60809720708 7411.351100815609 7915.262200945627 6678.168680319038 7371.855274144634 6606.251450523146 7262.205338942125 7486.6342682132745 7194.960009440865 1.183431721413621 1.1359240943433102 1.2170475007112058 1.0300753709667332 1.1001120493456 0.9281731478085049 1.0245859969300255 0.9181776468326098 1.009346171405126 1.0405386907487588 1.0 12.812770952956127 -6.5619745035316175 1.4948638304798343 0.9957580439062145 1.17649350441434 0.6900280408168995 0.05118695127937323 0.15309139034893332 0.6709252719302153 0.006694547088524822 0.02006996398596526 2.7417351284078667e-07 6.5619745035316175 0.1807354605081256 DMES(ph)PTKLDVTLAK ddPTM_A549_MK2206_60min_R1 14 DMESPTKLDVTLAK 14 1 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.92)PT(0.08)KLDVTLAK;DMES(0.977)PT(0.023)KLDVTLAK;DMES(0.964)PT(0.036)KLDVTLAK;DMES(0.95)PT(0.05)KLDVTLAK;DMES(0.974)PT(0.026)KLDVTLAK;DMES(0.986)PT(0.014)KLDVTLAK;DMES(0.922)PT(0.078)KLDVTLAK;DMES(0.983)PT(0.017)KLDVTLAK;DMES(0.985)PT(0.015)KLDVTLAK;DMES(0.977)PT(0.023)KLDVTLAK;DMES(0.889)PT(0.111)KLDVTLAK;DMES(0.958)PT(0.042)KLDVTLAK;DMES(0.934)PT(0.066)KLDVTLAK;DMES(0.594)PT(0.406)KLDVTLAK 227.09 1.2365e-47 6287300000.0 90775.2 98276.99999999999 95053.7 86984.6 126081.1 99204.8 92631.29999999999 98035.8 140218.4 132469.89999999997 136928.59999999998 True False 106095.83451943811 103278.87952499338 108533.74397177485 108295.83090488722 107534.73720862312 109702.58608918336 109461.20817103147 111932.67487204568 108459.15628277355 102544.85758565857 102925.44958289266 1.0308027309998984 1.0034338440447237 1.0544888986310956 1.0521773899823428 1.0447827786461918 1.0658450998635922 1.0634999275167132 1.087512129659428 1.053764221796517 0.9963022556736313 1.0 16.651240224865177 -3.8024500982865908 16.544120346991754 1.0374566566056072 0.3966223853229577 0.0 0.02878545150187607 0.0 0.0 0.004216051476466911 0.0 0.00015759770967447697 3.8024500982865908 -0.6408342712826495 DMES(ph)PTKLDVTLAK ddPTM_A549_PD325901_60min_R1 20 DMESPTKLDVTLAK 14 1 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.872)PT(0.128)KLDVTLAK;DMES(0.996)PT(0.004)KLDVTLAK;DMES(0.959)PT(0.041)KLDVTLAK;DMES(0.883)PT(0.117)KLDVTLAK;DMES(0.503)PT(0.496)KLDVTLAK;DMES(0.987)PT(0.013)KLDVTLAK;DMES(0.987)PT(0.013)KLDVTLAK;DMES(0.593)PT(0.406)KLDVTLAK;DMES(0.863)PT(0.137)KLDVTLAK;DMES(0.946)PT(0.053)KLDVTLAK;DMES(0.976)PT(0.024)KLDVTLAK;DMES(0.5)PT(0.5)KLDVTLAK;DMES(0.962)PT(0.038)KLDVTLAK;DMES(0.974)PT(0.026)KLDVTLAK;DMES(0.865)PT(0.135)KLDVTLAK;DMES(0.991)PT(0.009)KLDVTLAK;DMES(0.978)PT(0.022)KLDVTLAK;DMES(0.999)PT(0.001)KLDVTLAK;DMES(0.97)PT(0.03)KLDVTLAK;DMES(0.87)PT(0.13)KLDVTLAK 225.94 4.2423000000000002e-47 10843149300.0 230541.59999999998 234096.1 242456.90000000002 248104.2 276456.1 261420.49999999997 256182.2 270066.5 273508.3 272578.8 294709.99999999994 True False 253946.01351624366 253824.19990733443 258911.48324578122 263429.032948479 257038.77725776972 259291.57812169043 265931.3538092784 264679.8117944292 262013.69730173415 255368.1280494108 258462.538320614 0.9825254180597432 0.9820541172294537 1.0017369825742806 1.0192155298796308 0.9944914219596569 1.0032075820599116 1.0288970909950579 1.0240548340746498 1.0137395500492805 0.9880276256230035 1.0 17.979595665245515 -5.847327264979607 3.759859727390819 1.0091037516726242 0.9819254526627437 0.4271475512233609 0.011759008261522009 0.1428396340369227 3.8451835641003105 0.0015327821895996317 0.0055474827862316035 1.4212573872247093e-06 5.847327264979607 -0.027178299009880558 DMESPT(ph)KLDVTLAK ddPTM_A549_PD325901_60min_R1 3 DMESPTKLDVTLAK 14 1 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.399)PT(0.601)KLDVTLAK;DMES(0.37)PT(0.63)KLDVTLAK;DMES(0.407)PT(0.575)KLDVT(0.017)LAK 124.09 4.3090000000000003e-07 248873000.0 36639.9 36808.1 39372.9 36496.6 44205.6 40447.2 43695.3 43593.5 40085.6 41080.8 44178.6 True False 40359.55567513121 39910.04776503819 42044.98176248153 38750.91209220748 41100.75115704106 40117.81141342642 45358.148552485625 42723.99344406081 38400.94163342898 38486.95127710682 38744.91227121941 1.041673688473188 1.0300719610787263 1.0851742667052957 1.000154854421816 1.0608038255276067 1.0354343076736512 1.1706865726001057 1.1026994498009783 0.9911221727543841 0.9933420679260588 1.0 15.241719257085146 -8.779096063641846 24.9876357520817 0.9958076825551974 1.0654140852898997 0.3559683618494853 0.042533466533964094 195.52537528234106 276705.4500575211 0.007597776794552289 0.008096838783934695 1.6630447529818469e-09 8.779096063641846 0.06960640273470231 DMLGS(ph)LR ddPTM_A549_MK2206_60min_R1 2 DMLGSLR 7 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DMLGS(1)LR;DMLGS(1)LR 78.334 0.016821 10074600.0 1354.93 2291.2 1558.58 893.8299999999999 2959.1 2159.85 972.1 2074.6 1920.49 1816.42 2219.92 True False 1583.6090591419497 2407.812293493549 1779.6100801918183 1112.818390125553 2523.8203098960666 2388.403893407604 1148.7179869337867 2368.6809031960374 1485.5020813923393 1406.0894604415216 1668.6525973248463 0.949034605334126 1.442967995467547 1.0664952567387946 0.6668963880855747 1.5124899658216515 1.431336814647129 0.6884105108369415 1.4195171043951653 0.8902404753235451 0.8426496100480944 1.0 10.704467910850969 DMLGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 DMLGSLR 7 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DMLGS(1)LR;DMLGS(1)LR 112.84 0.0077128 14542400.0 2349.16 2353.3999999999996 2862.7 2510.6 3461.6 2325.6 2708.8999999999996 2600.8 1850.28 2993.1 4242.5 True False 2587.644993839812 2551.729277258019 3056.98003681354 2665.674060013703 3218.4691578717025 2306.661084650222 2811.988671866959 2548.9250037118695 1772.5191661220224 2804.115155194358 3720.6993954233153 0.6954727374704797 0.6858197897945746 0.8216143557777901 0.7164443500307074 0.8650172496683322 0.6199536268604646 0.755768841558626 0.6850660945216915 0.47639408018350743 0.7536527026729407 1.0 11.861358120906301 -11.090040947611637 1.438861244720498 0.9989450581278735 0.6793122467686914 0.12009190084023558 0.12076904523589735 0.2764308714741401 1.0280065486081333 0.083703398910638 0.018597931293057764 8.127538817589501e-12 11.090040947611637 -0.3196328113591821 DMLGS(ph)LRDSALFVK ddPTM_A549_MK2206_60min_R1 1 DMLGSLRDSALFVK 14 1 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DMLGS(0.993)LRDS(0.007)ALFVK 41.092 0.022281 1394900.0 508.26 772.77 634.61 435.11 812.15 483.0 447.1 287.06 801.61 926.03 948.23 True False 594.0418622360469 812.100692232459 724.6072405590534 541.7119695328304 692.6838108485995 534.1107394105485 528.3322826438599 327.75163408438016 620.0466149081288 716.8391798442337 712.7583211833493 0.8334407955417418 1.1393773570881327 1.0166240351372287 0.760021950544834 0.9718354598773098 0.749357423879383 0.741250248424602 0.45983557728268126 0.8699254662908785 1.0057254451328037 1.0 9.477269166954263 -4.946843758584364 15.502466285327385 0.8915954228495551 0.4460428141569854 0.0 0.17971613267437775 7360422.11854775 55552541.77879258 0.025476103904591273 99163601.90973622 1.1302024422174957e-05 4.946843758584364 -0.4455526086925697 DMLGS(ph)LRDSALFVK ddPTM_A549_PD325901_60min_R1 2 DMLGSLRDSALFVK 14 1 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DMLGS(0.996)LRDS(0.004)ALFVK;DMLGS(1)LRDSALFVK 84.14 5.9844e-05 10783400.0 2220.67 3019.3 3399.0 3665.6600000000003 4596.9 4780.3 3815.2 3742.2 3364.5 4249.0 4658.2 True False 2446.110783629149 3273.747007234271 3629.6765798474225 3892.079492882115 4274.0296024440795 4741.3708217034155 3960.3895237575475 3667.5588853008935 3223.1017653639146 3980.7174148611257 4085.270930762727 0.5987634174295647 0.8013537076776098 0.8884787915815796 0.9527102507630889 1.0462046887172085 1.1606013167939864 0.9694313035483637 0.8977516907590151 0.788956673863037 0.9744072014626259 1.0 11.99621604418518 -5.34002858061821 1.6560681657919603 0.9343197290743688 0.5127495013083399 0.5758261254152128 0.09262048781246812 0.6210986599036544 1.827533056157425 0.016663992495728565 0.395718689652502 4.570581099483642e-06 5.34002858061821 -0.4215702277660289 DMLGSLRDS(ph)ALFVK ddPTM_A549_MK2206_60min_R1 4 DMLGSLRDSALFVK 14 1 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DMLGS(0.141)LRDS(0.859)ALFVK;DMLGS(0.143)LRDS(0.857)ALFVK;DMLGS(0.085)LRDS(0.915)ALFVK;DMLGSLRDS(1)ALFVK 168.64 4.9821e-23 50466600.0 11888.8 13009.0 12837.4 11153.3 15326.599999999999 12496.5 11018.3 10926.9 16651.6 16767.8 15202.300000000001 True False 13895.338786746772 13671.10253406842 14657.936354537103 13885.859000690663 13072.077443024256 13818.871335494652 13020.18248681468 12475.821537227794 12880.039187141132 12979.942334257137 11427.149347864568 1.2159934524128226 1.1963703385589501 1.282729043641692 1.2151638679060026 1.1439491202123022 1.2093017177619223 1.1394077464514636 1.0917702357289305 1.127143681687163 1.135886294921204 1.0 13.480177928803492 -9.883969974176956 0.15950649388698476 0.8693726797846293 1.2978630952187267 0.4950927761905227 0.05141494968053101 2.041010363384482 0.1382762914502488 0.24149632763213746 0.10810843216497326 1.3062611960066926e-10 9.883969974176956 0.4284904154340974 DMLGSLRDS(ph)ALFVK ddPTM_A549_PD325901_60min_R1 5 DMLGSLRDSALFVK 14 1 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DMLGS(0.039)LRDS(0.961)ALFVK;DMLGS(0.008)LRDS(0.992)ALFVK;DMLGS(0.213)LRDS(0.787)ALFVK;DMLGSLRDS(1)ALFVK;DMLGSLRDS(1)ALFVK 191.61 3.603900000000001e-27 134262000.0 28152.2 28674.9 33580.2 33146.3 35991.7 37124.0 34153.0 35410.9 32329.4 35772.2 35700.8 True False 31010.190619445715 31091.434457570314 35859.15430614665 35193.671670290874 33463.767156624366 36821.67445242298 35452.71110423872 34704.60182018633 30970.707746516917 33513.53718707815 31309.827926017344 0.9904299280315546 0.9930247630564091 1.1453002677267663 1.124045515467244 1.068794349036239 1.1760420574469364 1.1323189379389336 1.1084251852865679 0.9891688903464515 1.0703839467360856 1.0 14.934327959218507 -8.764062527135822 24.98992636131336 0.9948853028473246 1.0951556341774698 0.19493443818336176 0.059772985323378394 51.37706217030349 489452.6499703494 0.009955987808560001 0.010836852809241675 1.7216206884372756e-09 8.764062527135822 0.10027033133014518 DMNPDNYLVVS(ph)ASYK ddPTM_A549_PD325901_60min_R1 1 DMNPDNYLVVSASYK 15 0 O43903 O43903 GAS2 Growth arrest-specific protein 2 1 DMNPDNYLVVS(0.5)AS(0.5)YK 52.172 0.024201 50658000.0 3253.9 3079.9 2850.1 3286.5 3200.7 5247.7 3141.8 3626.3 3407.6 3704.3 4966.0 True False 3584.2335326054235 3339.4539819099887 3043.524925043583 3489.4996408169504 2975.8938738155634 5204.964471069391 3261.362918258926 3553.970601722685 3264.3904222482024 3470.409865820209 4355.213482067689 0.8229753942862443 0.7667715935533298 0.6988233613748444 0.8012235577394174 0.6832946045167739 1.1951112138361293 0.7488411146060642 0.8160267266704445 0.7495362594024655 0.7968403569903973 1.0 12.088527722653115 -10.875854134152775 1.0426886618721318 1.0037275597229545 0.8061954971339862 0.0 0.1428420235358209 0.6514700459989172 1.2181852621890257 0.09729040937943771 0.021740951151599536 1.3309013507926981e-11 10.875854134152775 -0.19753206258896827 DMNS(ph)PTDRHPDGYLAR ddPTM_A549_MK2206_60min_R1 6 DMNSPTDRHPDGYLAR 16 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 DMNS(0.871)PT(0.129)DRHPDGYLAR;DMNS(0.998)PT(0.002)DRHPDGYLAR;DMNS(0.999)PT(0.001)DRHPDGYLAR;DMNS(0.94)PT(0.06)DRHPDGYLAR;DMNS(0.79)PT(0.21)DRHPDGYLAR;DMNS(0.963)PT(0.037)DRHPDGYLAR 100.39 3.9931e-07 66498600.0 5584.15 7133.240000000001 5586.12 5329.03 7061.56 5739.219999999999 5091.17 5115.079999999999 7813.08 8618.66 8527.33 True False 6526.618000640266 7496.291447468542 6378.315813856919 6634.642589229245 6022.813878391967 6346.540451014096 6016.169687828092 5840.158254275518 6043.4298549249725 6671.698720080667 6409.758618664678 1.0182314793626241 1.1695122848526578 0.9950945415142155 1.0350846239216753 0.9396319326057052 0.990137199945955 0.9385953583820632 0.911135442334672 0.9428482747114709 1.040865829276822 1.0 12.646054312923821 -6.217125007234636 1.6263628396493819 0.9650162608497921 1.088983504584815 0.40440404059602875 0.05236053681506191 0.24053070500081344 1.1860507525615405 0.006720153555809315 0.02605258901758116 6.065617118599549e-07 6.217125007234636 0.12396724373502299 DMNS(ph)PTDRHPDGYLAR ddPTM_A549_PD325901_60min_R1 5 DMNSPTDRHPDGYLAR 16 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 DMNS(0.818)PT(0.182)DRHPDGYLAR;DMNS(0.996)PT(0.004)DRHPDGYLAR;DMNS(0.925)PT(0.075)DRHPDGYLAR;DMNS(0.994)PT(0.006)DRHPDGYLAR;DMNS(0.988)PT(0.012)DRHPDGYLAR 109.13 1.7712e-07 78175600.0 9945.3 9174.400000000001 9293.6 10370.8 11651.599999999999 10628.2 9798.99 10994.17 10675.2 11655.0 13215.1 True False 10954.939534657093 9947.558885559596 9924.319582956754 11011.380762204304 10833.231811837855 10541.647462968474 10171.89592666307 10774.882654590481 10226.558468007988 10919.101310945256 11589.726477421013 0.945228479377783 0.8583083392812876 0.8563031752553619 0.9500984154938051 0.9347271338062246 0.9095682700972801 0.8776648824698197 0.9296925751942462 0.8823813476470964 0.9421362386953427 1.0 13.50055889806599 -10.827952361771981 0.9132483485167419 1.0041613623152277 0.9029184993585995 0.2930256864414421 0.035689273601548485 0.3834376499038893 0.5282259363574676 0.02722722889662424 0.005695618362016481 1.486098645102862e-11 10.827952361771981 -0.10124286295662821 DMPAAGS(ph)LGSSSR ddPTM_A549_MK2206_60min_R1 4 DMPAAGSLGSSSR 13 0 H0Y9H4;A0A087WVP1;Q14517;H0Y9C8 H0Y9H4 FAT1 Protocadherin Fat 1;Protocadherin Fat 1, nuclear form 1 DMPAAGS(0.988)LGS(0.011)S(0.001)SR;DMPAAGS(0.937)LGS(0.029)S(0.031)S(0.002)R;DMPAAGS(0.999)LGS(0.001)SSR;DMPAAGS(0.999)LGS(0.001)SSR 162.48 1.0153000000000001e-18 43743400.0 7224.860000000001 7453.85 7516.67 6733.0199999999995 8722.33 6879.62 6874.3 6554.780000000001 9698.300000000001 10689.69 10954.08 True False 8444.239737132028 7833.219127032505 8582.64683331971 8382.610202256752 7439.286811400679 7607.616822077838 8123.271327619521 7483.940138171859 7501.650535002699 8274.88160468787 8233.879618771922 1.0255481168173164 0.9513400109923911 1.0423575799860683 1.0180632448336684 0.9034971551491111 0.9239407392760145 0.9865666859034189 0.9089202763068917 0.9110711939363483 1.0049796678861407 1.0 13.00735664093964 -6.736326541962096 24.994468801812612 0.9497592972661526 1.007544625941138 0.34718376845076204 0.04011942924779943 233.65745056587332 232554.91948654092 0.006226666256409267 0.012957842713024843 1.8351579863357783e-07 6.736326541962096 0.057785328674985426 DMPAAGS(ph)LGSSSR ddPTM_A549_PD325901_60min_R1 4 DMPAAGSLGSSSR 13 0 H0Y9H4;A0A087WVP1;Q14517;H0Y9C8 H0Y9H4 FAT1 Protocadherin Fat 1;Protocadherin Fat 1, nuclear form 1 DMPAAGS(0.979)LGS(0.02)S(0.001)SR;DMPAAGS(0.971)LGS(0.012)S(0.016)S(0.001)R;DMPAAGS(0.938)LGS(0.053)S(0.006)S(0.004)R;DMPAAGS(0.975)LGS(0.024)SSR 78.40100000000001 0.00029871 51173500.0 7790.1 7663.4 7353.8 7319.129999999999 8896.130000000001 7251.259999999999 7803.499999999999 7626.24 8856.93 7702.0 8929.3 True False 8580.945217231483 8309.221612704634 7852.873089991765 7771.216037149721 8271.296518782407 7192.208142707591 8100.466462739051 7474.12866053046 8484.704032903735 7215.6944055684535 7831.052707496379 1.0957588382743562 1.0610606163779899 1.0027863919846303 0.9923590515117618 1.0562177050429757 0.9184216236755441 1.0344032616438366 0.9544219582861129 1.0834691515716195 0.9214207431730262 1.0 12.934990542855306 -5.538832616740597 4.053237167432621 1.0222899575853999 1.090462602746575 0.14284592316828504 0.05432007096484738 0.2620961926969479 9.5672132059815 0.006782439765513501 0.035167350684706986 2.8917942061580897e-06 5.538832616740597 0.06817264516117505 DMPGGFLFEGLS(ph)DDEDDFHPNTR ddPTM_A549_MK2206_60min_R1 3 DMPGGFLFEGLSDDEDDFHPNTR 23 0 H3BUV9;Q96S82 H3BUV9 UBL7 Ubiquitin-like protein 7 1 DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(0.999)DDEDDFHPNT(0.001)R;DMPGGFLFEGLS(1)DDEDDFHPNTR 143.08 1.4595999999999998e-27 28747200.0 11858.2 13496.2 11635.599999999999 10471.8 18833.3 13456.300000000001 14121.5 14287.1 18996.7 17225.0 18334.5 True False 13859.574254844938 14183.098933068975 13285.70304320593 13037.391470096967 16062.946518321649 14880.236734430971 16687.19375834325 16312.340177408727 14693.977781496307 13333.860536717953 13781.5376435423 1.0056624023618441 1.0291376259974037 0.9640218230243193 0.9460041257592166 1.165540952960961 1.0797225330951004 1.2108368594242072 1.1836371672976782 1.0662074263085988 0.9675161713878772 1.0 13.75044924197154 -6.732906219178873 24.999417977563425 1.0689450954719837 0.9876883929560847 0.29174439493985216 0.07514956872178365 298.73207178375736 261733.5300175778 0.011928661907186215 0.024828206651905986 1.8496679900564574e-07 6.732906219178873 -0.081256702515899 DMPGGFLFEGLS(ph)DDEDDFHPNTR ddPTM_A549_PD325901_60min_R1 4 DMPGGFLFEGLSDDEDDFHPNTR 23 0 H3BUV9;Q96S82 H3BUV9 UBL7 Ubiquitin-like protein 7 1 DMPGGFLFEGLS(0.997)DDEDDFHPNT(0.003)R;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(0.962)DDEDDFHPNT(0.038)R 164.96 4.3791e-34 93620100.0 4390.3099999999995 5655.389999999999 5718.139999999999 5631.9 6791.93 5125.759999999999 6110.31 6574.839999999999 5420.05 6408.469999999999 6903.74 True False 4836.011039224596 6131.989562892932 6106.207366369154 5979.769672027074 6314.8882676864905 5084.017510000313 6342.841190739929 6443.6996583377995 5192.2641472315945 6003.838110523669 6054.623746413608 0.7987302335820876 1.0127779726238397 1.0085197069406833 0.9876368743093453 1.0429860767858692 0.8396917336129726 1.0476028662387225 1.0642609562905798 0.8575700761434064 0.9916120905250269 1.0 12.563821593706528 -8.769932145915897 24.99993191886089 0.9327414378413491 0.9781944856591867 0.00582759645656683 0.08720839994411911 475.7167510307028 1400349.9677133067 0.015527211373859597 0.016660069806303603 1.6985090064435813e-09 8.769932145915897 0.045453047817837544 DMQGLS(ph)LDAASQPSK ddPTM_A549_PD325901_60min_R1 2 DMQGLSLDAASQPSK 15 0 E9PLL0;M0QZK6;E9PLZ8;E9PQA6;Q96EY5-3;Q96EY5 E9PLL0 MVB12A Multivesicular body subunit 12A 1 DMQGLS(0.999)LDAAS(0.001)QPSK;DMQGLS(1)LDAASQPSK 144.97 1.3688e-13 8654100.0 8257.7 8721.0 9799.4 8168.0 10744.6 8262.5 8443.2 10274.3 9112.3 9669.8 11566.400000000001 True False 9096.015625002552 9455.949276352167 10464.446212579238 8672.51880912608 9989.936362857725 8195.212939423142 8764.51059629632 10069.371026467574 8729.341719876838 9059.247177741612 10143.806125450614 0.89670637554683 0.9321894720195186 1.0316094455240172 0.8549570744818258 0.9848311609380198 0.8079031517431619 0.8640258388127443 0.9926620148233823 0.860558809180618 0.8930816565009199 1.0 13.308311456743917 -11.041707322959985 1.3294442862082057 1.0001693244214702 0.9095942917070938 0.0 0.07165065166343661 0.5609091535159886 1.7616447953339687 0.0455863793476075 0.01011427310648735 9.084325291458837e-12 11.041707322959985 -0.09057503271437639 DMQPLS(ph)PISVHER ddPTM_A549_MK2206_60min_R1 4 DMQPLSPISVHER 13 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 DMQPLS(0.993)PIS(0.007)VHER;DMQPLS(0.99)PIS(0.01)VHER;DMQPLS(0.999)PIS(0.001)VHER;DMQPLS(0.977)PIS(0.023)VHER 78.078 0.00026639 25794600.0 1646.5099999999998 1953.1799999999998 1730.44 1662.7799999999997 2085.06 1723.5 1741.3200000000002 1516.44 2703.8199999999997 2433.49 2352.98 True False 1924.400634695379 2052.5885192937 1975.8424124312712 2070.1611746450303 1778.35043606228 1905.8796260332915 2057.6953039888313 1731.4000139027291 2091.4090871133058 1883.7629188677936 1768.670127055669 1.0880494928124087 1.1605264813912326 1.1171344968213406 1.170462000221182 1.005473213381359 1.077577778285902 1.1634138398743166 0.9789276063507761 1.1824754967705058 1.0650730682061789 1.0 10.788449282131646 -11.083140523533961 1.399463469232226 0.9998559680820558 1.1131336873378428 0.1189794634664213 0.06604057504834905 0.43265323531614647 1.5100630249641573 0.04582539105764361 0.010007086214605594 8.25770713866777e-12 11.083140523533961 0.113277719255787 DMQPLS(ph)PISVHER ddPTM_A549_PD325901_60min_R1 3 DMQPLSPISVHER 13 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 DMQPLS(0.998)PIS(0.002)VHER;DMQPLS(0.998)PIS(0.002)VHER;DMQPLS(0.999)PIS(0.001)VHER 71.558 0.00067096 27593600.0 2221.58 2662.54 2836.34 2972.4 2641.4 2891.46 2537.31 2951.36 2656.3799999999997 3175.8399999999997 2996.7599999999998 True False 2447.113166159242 2886.921589984943 3028.8310886979825 3155.9983971898077 2455.87717633531 2867.912908420506 2633.8687205193073 2892.49280950287 2544.741586410284 2975.316920407753 2628.177518026816 0.9311064984668489 1.0984499982148797 1.1524453991113848 1.2008315174841269 0.9344411324921212 1.091217350711408 1.0021654558923265 1.1005698015689962 0.9682533120216423 1.1320836967822336 1.0 11.359847009229325 -8.243921005373103 0.8387690727951685 0.9855232648369374 1.0785370618913077 0.0 0.09250251578915931 0.6930408159578869 0.9708434265965386 0.017148867757196633 0.023294538165737042 5.702679899476319e-09 8.243921005373103 0.0930137970543703 DMS(ph)LKR ddPTM_A549_MK2206_60min_R1 1 DMSLKR 6 1 I3L379;I3L2C0;B7Z683;A0A0G2JQ41;A0A1C7CYZ0;Q12979-3;Q12979-4;Q12979-2;Q12979 I3L379 ABR Active breakpoint cluster region-related protein 1 DMS(1)LKR 69.19800000000001 0.021925999999999998 35299000.0 6913.6 6429.1 5339.2 6411.5 7749.9 6738.5 6496.9 7260.2 9677.9 9030.6 8899.2 True False 8080.446658708402 6756.313729093653 6096.378844948706 7982.317787823171 6609.899976230453 7451.563597345715 7677.302632764243 8289.355583429997 7485.87110243059 6990.581187975913 6689.283034574797 1.2079690180461968 1.0100206097084539 0.9113650616124992 1.193299453254569 0.9881328001918833 1.1139554955039173 1.1477018677611164 1.2391994090524991 1.1190842222908615 1.045041920314001 1.0 12.70763587402007 -5.24352380608169 23.24994993604454 1.0710655357781924 1.207969323690482 0.1387824739180319 0.09296368184647462 2169.6424533559034 2815536.3497614553 0.013136604627687514 0.5108740833000435 5.707897871702836e-06 5.24352380608169 0.13690378791228963 DMS(ph)LKR ddPTM_A549_PD325901_60min_R1 3 DMSLKR 6 1 I3L379;I3L2C0;B7Z683;A0A0G2JQ41;A0A1C7CYZ0;Q12979-3;Q12979-4;Q12979-2;Q12979 I3L379 ABR Active breakpoint cluster region-related protein 1 DMS(1)LKR;DMS(1)LKR;DMS(1)LKR 86.794 0.016363 124222200.0 11217.8 11958.900000000001 11494.600000000002 12752.230000000001 13885.37 12971.1 13448.97 13947.210000000001 14493.86 15458.8 14963.6 True False 12356.622797892105 12966.718472763205 12274.692678644962 13539.906284684366 12910.109513126014 12865.467662154504 13960.777912908774 13669.021955175422 13884.733467955846 14482.728729784681 13123.172062075728 0.9415881114293356 0.9880780661434247 0.9353449471349414 1.0317556015144347 0.9837644017816822 0.980362644130381 1.0638264778417117 1.0415943561905379 1.0580318083370204 1.103599698402027 1.0 13.679828862089291 -7.699592670841632 10.777374431169328 1.0318652948947304 0.9781913974773342 0.49152237531833987 0.03585310274388096 0.397911684684036 67.46403489117264 0.004916063475538735 0.007290736732676528 1.997134569408362e-08 7.699592670841632 -0.053673897417396255 DMS(ph)PLSETEMALGK ddPTM_A549_MK2206_60min_R1 4 DMSPLSETEMALGK 14 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(0.975)PLS(0.024)ET(0.001)EMALGK;DMS(0.516)PLS(0.242)ET(0.242)EMALGK;DMS(0.994)PLS(0.006)ETEMALGK;DMS(0.923)PLS(0.052)ET(0.025)EMALGK 93.494 2.0356e-05 14548900.0 5116.37 5891.1 5121.09 5234.299999999999 7744.199999999999 6316.3099999999995 5974.73 6682.0 9294.1 8294.5 8123.5 True False 5979.888172763238 6190.931827077445 5847.337567253214 6516.703734976659 6605.038438679702 6984.69773177275 7060.261102842203 7629.1939627667625 7189.001189627931 6420.766689219563 6106.210752805681 0.9793124434847912 1.0138745742165607 0.957604937655727 1.0672254854587788 1.0816918554022754 1.1438677789762532 1.1562426173381184 1.249415434811401 1.1773260833364996 1.051514097555403 1.0 12.576061668962831 -6.500964440731182 2.5487401574947857 1.1085874120782209 0.9864895975460642 0.4604198273265532 0.0645465576948067 0.29467480419591663 3.797696953309403 0.012472930957911283 0.03132125388636311 3.155262960183569e-07 6.500964440731182 -0.12209781453215662 DMS(ph)PLSETEMALGK ddPTM_A549_PD325901_60min_R1 10 DMSPLSETEMALGK 14 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(0.997)PLS(0.003)ETEMALGK;DMS(0.988)PLS(0.012)ETEMALGK;DMS(0.848)PLS(0.076)ET(0.076)EMALGK;DMS(0.983)PLS(0.016)ET(0.001)EMALGK;DMS(0.781)PLS(0.18)ET(0.039)EMALGK;DMS(0.997)PLS(0.003)ETEMALGK;DMS(0.995)PLS(0.002)ET(0.002)EMALGK;DMS(0.924)PLS(0.037)ET(0.039)EMALGK;DMS(0.911)PLS(0.036)ET(0.053)EMALGK;DMS(0.98)PLS(0.008)ET(0.013)EMALGK 96.734 1.6019e-05 34792400.0 16914.899999999998 17012.999999999996 16235.42 17347.600000000002 19802.299999999996 16197.299999999997 15740.900000000001 16848.3 15473.000000000002 17777.5 20820.8 True False 18632.088195908746 18446.74521712868 17337.253232711537 18419.121852741882 18411.454762226364 16065.394558997701 16339.928563250982 16512.247439264338 14822.72361880693 16655.02561607288 18259.97359392569 1.0203787042773622 1.0102284717029997 0.9494675960801443 1.008715689428441 1.008295804346128 0.8798147749973729 0.8948495176732663 0.9042864905761558 0.8117604082263193 0.91210567914585 1.0 14.156397058565998 -7.255785057478617 24.77842046132582 0.9051599102549719 0.9977594788844293 0.5497907672684589 0.044462509294690734 406.5388021223429 1781535.8570912436 0.01012747610023359 0.01723136123562363 5.549002781655539e-08 7.255785057478617 0.0925995686294574 DMS(ph)PPFICEETDEQK ddPTM_A549_MK2206_60min_R1 1 DMSPPFICEETDEQK 15 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DMS(0.999)PPFICEET(0.001)DEQK 50.155 0.008465100000000001 4186400.0 1240.9 1476.5 1392.2 1222.4 1603.2 1611.6 1699.3 2258.6 1732.9 2032.9 2050.7 True False 1450.333582907785 1551.6475433586004 1589.6348943545067 1521.888054875621 1367.3714037461982 1782.1384423064994 2008.0408139045207 2578.7634666724043 1340.400916872666 1573.666478089632 1541.454593559256 0.9408863478481904 1.006612552742023 1.0312563866600841 0.9873064449868385 0.8870656388190485 1.156140732106483 1.3026921599214323 1.6729415692472505 0.8695688620821764 1.0208970699915318 1.0 10.590076677440486 DMSPLSET(ph)EMALGKDVTPPPETEVVLIK ddPTM_A549_MK2206_60min_R1 1 DMSPLSETEMALGKDVTPPPETEVVLIK 28 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(0.019)PLS(0.1)ET(0.561)EMALGKDVT(0.32)PPPETEVVLIK 75.71 1.9100999999999997e-06 34397000.0 10660.0 11350.0 12103.0 10527.0 17883.0 14020.0 13097.0 13313.0 18430.0 16962.0 17304.0 True False 12459.147388022386 11927.666520230343 13819.38739144706 13106.115472574993 15252.434389466847 15503.587094277194 15476.555369686044 15200.158519352588 14255.634426662371 13130.27241937938 13006.939233895431 0.9578846463397378 0.9170233139205758 1.0624626703440292 1.007624871377973 1.1726382444933523 1.1919473763570467 1.1898691222724342 1.1686191690464531 1.0960022316021054 1.009482106686756 1.0 13.666993889522724 -5.899839552149565 2.0708962577244048 1.0833155609767606 0.932866126200612 0.40138221581375766 0.0732726220943968 0.3357929102172953 2.7539076656396815 0.01240247533105612 0.05863918618983656 1.2593906012027848e-06 5.899839552149565 -0.15044943477614858 DMSPLSETEMALGKDVT(ph)PPPETEVVLIK ddPTM_A549_PD325901_60min_R1 2 DMSPLSETEMALGKDVTPPPETEVVLIK 28 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(0.001)PLS(0.001)ET(0.01)EMALGKDVT(0.973)PPPET(0.016)EVVLIK;DMSPLS(0.001)ET(0.006)EMALGKDVT(0.989)PPPET(0.004)EVVLIK 86.697 1.6095e-08 78014000.0 9587.9 10012.5 11154.3 9807.6 14064.1 12180.5 13098.0 13041.5 13453.400000000001 11886.2 13132.099999999999 True False 10561.256549761078 10856.288513871801 11911.297874254822 10413.393177324311 13076.286134511038 12081.306046431908 13596.45155750062 12781.37705164116 12888.00038345874 11135.70330348842 11516.934951240655 0.9170197274252532 0.9426369567800948 1.03424200316176 0.9041809493073966 1.1353963697695804 1.0490035845110384 1.1805616351107333 1.1097898100279098 1.1190477707847424 0.9668981678401191 1.0 13.491469197110387 -6.758721063537768 24.999781923729188 1.0751244061327294 0.9550798457831897 0.4817033846940596 0.06493376717149249 53.413734331991215 491226.1325109539 0.009525573946031507 0.019147537719071458 1.7429259516358983e-07 6.758721063537768 -0.1200445603495397 DNEEREQSSDLTPSGDVS(ph)PVKPLSR ddPTM_A549_MK2206_60min_R1 2 DNEEREQSSDLTPSGDVSPVKPLSR 25 2 Q8WYQ5;Q8WYQ5-3 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 1 DNEEREQSSDLTPS(0.001)GDVS(0.999)PVKPLSR;DNEEREQSSDLTPSGDVS(1)PVKPLSR 138.09 7.094699999999999e-25 57476000.0 2712.2 3981.1000000000004 3729.3999999999996 3329.1000000000004 4501.7 4119.2 3894.0 3692.0 5343.299999999999 5734.1 6527.2 True False 3169.9530530763914 4183.720985347051 4258.2849985675175 4144.72964944898 3839.5058933659307 4555.091009896335 4601.489395247575 4215.3523062757995 4133.051081496746 4438.762827494593 4906.316098444421 0.6460963764812148 0.8527214515741305 0.8679190074845838 0.8447742799863819 0.7825639066719061 0.9284136852373934 0.9378705535720592 0.8591685129321985 0.8423939669943312 0.9047038018814015 1.0 12.260424469835115 -14.999999999983453 0.022965194572358176 2.116808017725546 4.7789897784391264e-09 0.42842226548307294 0.06635993931209783 1130.6454778213338 2.0145745845372227 129.5824655376979 66.0964131726471 1.0000000000381003e-15 14.999999999983453 -2.1168080129465565 DNEEREQSSDLTPSGDVS(ph)PVKPLSR ddPTM_A549_PD325901_60min_R1 3 DNEEREQSSDLTPSGDVSPVKPLSR 25 2 Q8WYQ5;Q8WYQ5-3 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 1 DNEEREQSSDLTPS(0.01)GDVS(0.989)PVKPLS(0.001)R;DNEEREQSSDLT(0.031)PS(0.166)GDVS(0.799)PVKPLS(0.003)R;DNEEREQSSDLTPSGDVS(1)PVKPLSR 156.67 5.5435e-41 118116000.0 11486.599999999999 13255.7 12254.0 15951.0 16044.7 14253.599999999999 12912.7 14047.0 13511.400000000001 15008.0 18401.4 True False 12652.711176012006 14372.804359883197 13085.630129288133 16936.25704265061 14917.775623210102 14137.523407366021 13404.099864600565 13766.821565341685 12943.562845159177 14060.39231871869 16138.144456085458 0.784025152981008 0.8906107141991422 0.8108509726689014 1.0494550404315035 0.9243798544376536 0.8760315317437234 0.8305849474253575 0.8530609948872045 0.8020477744749861 0.8712521044150601 1.0 13.978187088407031 -10.994842727013578 1.2882926238602854 0.9995789116737104 0.8660590661671123 0.0075993686883109035 0.07861985997981806 0.4389199462626945 1.3031731321442361 0.05069269411147172 0.011742282112779171 1.011945848351033e-11 10.994842727013578 -0.13351984550659812 DNEESEQPPVPGT(ph)PTLR ddPTM_A549_MK2206_60min_R1 4 DNEESEQPPVPGTPTLR 17 0 A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439;A0A2R8YDC1 A0A2R8Y6V8 ABCC4 Multidrug resistance-associated protein 4 1 DNEESEQPPVPGT(0.999)PT(0.001)LR;DNEES(0.002)EQPPVPGT(0.857)PT(0.141)LR;DNEESEQPPVPGT(1)PTLR;DNEES(0.007)EQPPVPGT(0.813)PT(0.181)LR 233.37 2.0433999999999997e-64 206677100.0 3026.02 3062.25 2952.2709999999997 2934.263 4854.54 3012.2599999999998 3425.55 2625.2 4955.13 4906.299999999999 3967.9700000000003 True False 3536.738196914025 3218.1054450727183 3370.947420766322 3653.1575667240713 4140.443596770251 3331.015353823641 4047.9280939625914 2997.330139337819 3832.8009667166316 3797.9634224266624 2982.613538599172 1.18578493363076 1.0789548841732102 1.1301991951493444 1.224817603570535 1.3881931209615817 1.1168109145605571 1.3571748540589539 1.0049341292622038 1.28504780023119 1.2733675929770074 1.0 11.5423613424338 -10.962229394225405 1.1470376634915713 0.9965717784180659 1.2031377407408965 0.0 0.13582766547152356 0.4840429319706614 1.1004269318536117 0.08162625951943625 0.017646108186751493 1.0908639901908273e-11 10.962229394225405 0.20656596232283064 DNEESEQPPVPGT(ph)PTLR ddPTM_A549_PD325901_60min_R1 4 DNEESEQPPVPGTPTLR 17 0 A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439;A0A2R8YDC1 A0A2R8Y6V8 ABCC4 Multidrug resistance-associated protein 4 1 DNEESEQPPVPGT(1)PTLR;DNEES(0.001)EQPPVPGT(0.801)PT(0.198)LR;DNEESEQPPVPGT(1)PTLR;DNEES(0.005)EQPPVPGT(0.8)PT(0.195)LR 263.45 1.0010999999999998e-99 268258200.0 3170.3999999999996 3081.1099999999997 3558.5299999999997 3958.69 3700.4500000000003 2965.05 2923.92 3670.56 3457.34 3472.26 3693.1499999999996 True False 3492.2566740748753 3340.765952856484 3800.033244979247 4203.209290462698 3440.5431578594685 2940.9036158591935 3035.191375630418 3597.347801301386 3312.0400230237124 3253.020911020403 3238.9159628067423 1.0782177475974386 1.0314457031980175 1.1732423096542024 1.2977210087353823 1.0622514438065267 0.9079900959550365 0.9371009962852562 1.110664136584772 1.022576708088963 1.004354836116661 1.0 11.661295320990678 -6.9935230048380035 24.996062971228127 1.0058330582530144 1.1441588067766795 0.4374794194950492 0.07809267404300084 131.08534768617594 505880.21950516285 0.0114855398176328 0.021669899096922147 1.0150255986366596e-07 6.9935230048380035 0.13832574852366508 DNFFSLT(ph)PK ddPTM_A549_PD325901_60min_R1 2 DNFFSLTPK 9 0 Q562F6-2;Q562F6 Q562F6-2 SGOL2 Shugoshin-like 2 1 DNFFS(0.068)LT(0.932)PK;DNFFS(0.029)LT(0.971)PK 67.153 0.005345399999999999 2725200.0 1989.86 2155.52 1924.75 2295.8 2334.3 2261.13 1786.35 2540.8 2186.7 2097.36 1926.31 True False 2191.8691223424917 2337.1732351980986 2055.375109461998 2437.6063518599 2170.3468208978256 2242.7161069552612 1854.3305267782275 2490.1217507809597 2094.8006034540863 1964.9323316623033 1689.3860818851808 1.2974352907516506 1.3834453001945264 1.216640252634502 1.4428947757991366 1.2846955732439456 1.3275331974160822 1.0976357309094116 1.4739802686205632 1.2399774248859117 1.1631043683452402 1.0 10.722283355116238 -10.26454798439964 0.4950314660730106 0.9637781962336892 1.3232487354399467 0.34867093885098455 0.11051475331819277 0.6149433553396149 0.2553310077652476 0.1014237446575394 0.024796328842624983 5.438160431651464e-11 10.26454798439964 0.3594705392062575 DNFYQHNVEKLENVSQLSLDKS(ph)PTEK ddPTM_A549_PD325901_60min_R1 2 DNFYQHNVEKLENVSQLSLDKSPTEK 26 2 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 DNFYQHNVEKLENVSQLS(0.429)LDKS(0.57)PT(0.002)EK;DNFYQHNVEKLENVSQLS(0.037)LDKS(0.962)PT(0.001)EK 300.9 9.555099999999998e-172 39767000.0 4291.7 4457.9 5248.9 5270.6 6476.4 7172.5 5517.3 7159.1 7001.4 7419.5 6764.4 True False 4727.390224617442 4833.582878001411 5605.12191819981 5596.152991598914 6021.520006367077 7114.089538034798 5727.263870682405 7016.306134294697 6707.155506024346 6951.031503780208 5932.421683064574 0.796873600221784 0.8147739888079696 0.9448286412614407 0.9433167921246034 1.0150188789776786 1.1991881086847822 0.9654175270500682 1.1827052271628489 1.1305931817307295 1.1717021943371768 1.0 12.53440543445128 -6.155121191839723 1.0437318540735934 1.0737909481842554 0.7811325207369626 0.6765192673524907 0.07676415150000652 0.3246781344621147 0.5676652647121727 0.01181629158741063 0.07377522275017002 6.996467291738397e-07 6.155121191839723 -0.29265842744729276 DNFYQHNVEKLENVSQLSLDKSPT(ph)EK ddPTM_A549_MK2206_60min_R1 1 DNFYQHNVEKLENVSQLSLDKSPTEK 26 2 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 DNFYQHNVEKLENVSQLSLDKS(0.496)PT(0.504)EK 288.09 9.8737e-155 10286000.0 2278.1 2224.5 2448.4 2036.2 2618.6 1889.2 1517.5 1535.6 3451.8 2902.9 3332.9 True False 2662.58758580242 2337.7175483922824 2795.6199363148794 2535.069091408491 2233.4074088384455 2089.113890050533 1793.2101071618376 1753.2760025777684 2669.972811391925 2247.1328738483917 2505.24894663951 1.0628035945784793 0.9331278440524041 1.1159050441134273 1.0119030664832656 0.8914912076240139 0.833894728447178 0.7157812039267448 0.6998410297426039 1.0657514954645015 0.89696989070194 1.0 11.290738255841893 -6.5399720020653636 23.53650961058891 0.9585085564531037 1.033037134566455 0.06389437186931224 0.12812989942891823 331.5439950803012 456516.9494045986 0.02207153467095723 0.04595720556536977 2.884217435786854e-07 6.5399720020653636 0.07452857811335134 DNIQGITK ddPTM_A549_MK2206_60min_R1 1 DNIQGITK 8 0 P62805 P62805 HIST1H4A Histone H4 0 85.53299999999999 0.0081993 11830000.0 2315.8 3299.5 2875.5 2668.2 3549.9 2308.5 2651.8 2995.4 4059.0 4064.8 3599.6 False True 2706.650424125913 3467.4304566960363 3283.28913856945 3321.9091197800476 3027.714412524093 2552.783937741718 3133.5977345448173 3420.00712302777 3139.6429808910793 3146.558856873793 2705.7199760939657 1.000343881865148 1.2815185929556878 1.2134622827116335 1.227735740996977 1.1190050852545965 0.9434767678460839 1.1581382265095093 1.263991526560322 1.1603724733642 1.1629284939590208 1.0 11.40179682242261 -10.579716019089018 0.8500478393663979 0.9987694832824764 1.155567393631525 0.0 0.10923963368161478 0.7123341526942774 0.9121984341234365 0.06949639979992539 0.018771691695611124 2.631988460828663e-11 10.579716019089018 0.15679791034904855 DNIQGITK ddPTM_A549_PD325901_60min_R1 1 DNIQGITK 8 0 P62805 P62805 HIST1H4A Histone H4 0 90.15 0.0073195 4299600.0 1398.2 1589.5 1675.7 1560.4 2104.8 2147.7 1575.0 2006.9 2176.6 1895.3 2196.8 False True 1540.1442346995632 1723.4527433507355 1789.423078802686 1656.7823640744775 1956.9661091658063 2130.2098432676667 1634.93748687307 1966.870805117408 2085.12507133039 1775.630434546078 1926.6075266625658 0.7994073589899925 0.8945531040960105 0.9287948137016144 0.8599480387915319 1.0157575334275946 1.1056791867505045 0.8486095191921358 1.0208985368829062 1.0822780677818806 0.9216357820536375 1.0 10.911846991736013 -5.723312206157773 0.4796918073143945 1.0350472077824169 0.7290222270244087 0.32908613322271985 0.07767114483521861 1.9285912110242012 0.38623577327665526 0.01519512675704219 0.30493984730349327 1.8909837371639718e-06 5.723312206157773 -0.3060249807580082 DNIQGITKPAIR ddPTM_A549_MK2206_60min_R1 2 DNIQGITKPAIR 12 1 P62805 P62805 HIST1H4A Histone H4 0 ; 122.78 9.9396e-06 202647000.0 7757.9 8961.3 9307.2 8384.3 10351.0 7565.0 8138.5 7841.2 11490.1 10479.599999999999 11582.0 False True 9067.243857555237 9417.391893192964 10627.10091131754 10438.453876385527 8828.381611886789 8365.523278759414 9617.160103549659 8952.714112667873 8887.610695919328 8112.251081601706 8705.869753061537 1.0415092477539787 1.081729012759605 1.2206822767570553 1.1990133292213225 1.0140723284749544 0.960906091642086 1.1046753944564418 1.0283537850448004 1.0208756790547984 0.9318139728369957 1.0 13.087772721050499 -6.780150924013122 24.767049000410605 1.0152638348817977 1.1379437685263831 0.4962694577151997 0.06133750862545418 129.62499699821163 171574.5556801468 0.008199183957923515 0.015515118237341228 1.6590102756581601e-07 6.780150924013122 0.1226799336445854 DNIQGITKPAIR ddPTM_A549_PD325901_60min_R1 4 DNIQGITKPAIR 12 1 P62805 P62805 HIST1H4A Histone H4 0 ;;; 173.06 8.8657e-16 417444000.0 30012.600000000002 28509.100000000002 30851.199999999997 31572.899999999998 35086.0 36009.8 34654.0 32348.100000000002 33822.2 32030.9 34334.1 False True 33059.457057891625 30911.661909695136 32944.947955336516 33523.08632574153 32621.68040012898 35716.54812781112 35972.77693339641 31702.89176890647 32400.770553868762 30008.463507572404 30111.223361792236 1.097911455163272 1.0265827309068607 1.09410858401522 1.1133086797223446 1.083372801170285 1.1861540030662259 1.1946634150720634 1.0528596393441085 1.0760363391605572 0.9965873238365259 1.0 14.878013702761072 -9.791497026555067 0.7707782925906053 1.0081942411464482 1.1067595321761823 0.4254469694453238 0.04731636231438664 0.45586825670759806 0.566388233391087 0.020789417155286392 0.010885178416227962 1.616229291760326e-10 9.791497026555067 0.0985652910297341 DNKAQDWEKHFLDAS(ph)TSK ddPTM_A549_MK2206_60min_R1 7 DNKAQDWEKHFLDASTSK 18 2 Q96L12 Q96L12 CALR3 Calreticulin-3 1 DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K;DNKAQDWEKHFLDAS(0.354)T(0.354)S(0.293)K;DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K;DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K;DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K;DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K;DNKAQDWEKHFLDAS(0.354)T(0.354)S(0.293)K 52.03 0.0038954999999999997 9812630000.0 41054.3 62548.40000000001 71484.29999999999 71429.4 124618.8 79630.7 90612.59999999999 91509.0 146280.0 105324.79999999999 95843.3 True False 47983.2621587324 65731.8463941829 81621.84864136323 88929.6062065878 106287.53960152637 88057.16781941922 107075.73651150762 104480.68098455913 113147.81356115974 81531.85452874958 72042.76346948743 0.6660386116234277 0.9124004026028594 1.1329638774327817 1.2344002634525886 1.4753395689289843 1.2222902562130955 1.4862802501580585 1.4502592065171163 1.5705645940286799 1.1317147011341548 1.0 16.136565901816113 -5.622206852945145 1.3349345294267176 1.314195351265054 0.5907473047294441 0.631941646886778 0.16111183429088582 0.4985513235146499 1.1847981702044152 0.03221484966867955 0.40674296865373244 2.3866742475420073e-06 5.622206852945145 -0.7234480465356098 DNKAQDWEKHFLDAS(ph)TSK ddPTM_A549_PD325901_60min_R1 4 DNKAQDWEKHFLDASTSK 18 2 Q96L12 Q96L12 CALR3 Calreticulin-3 1 DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K;DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K;DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K;DNKAQDWEKHFLDAS(0.357)T(0.357)S(0.285)K 51.028999999999996 0.0042801 7791437000.0 30718.199999999997 30091.899999999998 36316.100000000006 44382.1 46554.2 64753.0 34878.2 42128.8 82463.0 32939.9 31796.4 True False 33836.68905045635 32627.85002053224 38780.72893244988 47123.48151793762 43284.39359527118 64225.67303678876 36205.50898708336 41288.50803459574 78997.36688280707 30860.069092441492 27885.64437398653 1.213408899455855 1.1700590304798384 1.3907058561152332 1.6898831845498732 1.552210629052186 2.303180524553432 1.2983565486784348 1.4806366846273145 2.8329044802888164 1.1066650882641855 1.0 14.767234988323011 -6.237705707372247 1.2472666745136194 1.831561893794151 1.1530191654507989 0.05446432976384352 0.5147798588859298 0.8844947101874643 2.433589670937262 0.10201236203415733 0.48095509152754906 5.784879175945362e-07 6.237705707372247 -0.678542728343352 DNKAQDWEKHFLDASTSK ddPTM_A549_MK2206_60min_R1 2 DNKAQDWEKHFLDASTSK 18 2 Q96L12 Q96L12 CALR3 Calreticulin-3 0 ; 34.094 0.041442 465261000.0 5920.1 9285.3 11074.7 10619.5 16070.0 11404.2 12704.7 12759.5 19653.5 15385.3 14936.7 False True 6919.268147451343 9757.88210927708 12645.258989015845 13221.27797672747 13706.124287800274 12610.984874504717 15012.979537699493 14568.198199329929 15202.013630190391 11909.750044445089 11227.505158051663 0.6162783316549427 0.8691051103440677 1.1262750549660143 1.1775793277855675 1.220763125454554 1.1232223630252274 1.337160778495223 1.2975454470294792 1.3539974746115757 1.0607654930271098 1.0 13.454749764458638 -5.506783558292622 1.6300609466953724 1.1941260580849204 0.5393251533817354 0.7528434967541663 0.10383283017464284 0.30754866130949354 1.0924640216932988 0.019743164272638582 0.2722607040822598 3.1132675266376863e-06 5.506783558292622 -0.6548009047031851 DNLAEDIMR ddPTM_A549_MK2206_60min_R1 2 DNLAEDIMR 9 0 P08670;B0YJC4 P08670 VIM Vimentin 0 ; 120.68 0.00037761 3156000.0 880.98 814.6200000000001 758.24 727.53 1073.31 932.11 771.47 1075.81 1574.9299999999998 1128.46 1228.0900000000001 False True 1029.6678861069388 856.0806784766564 865.7698335694314 905.774882660063 915.4275208051594 1030.745261515458 911.6361129305719 1228.309362029948 1218.2108696464109 873.5401022504925 923.1213594402818 1.1154198476473989 0.9273760916936487 0.9378721711025899 0.9812088880808298 0.9916654093674233 1.1165869481564503 0.9875582485528515 1.330604421042442 1.319664914248167 0.946289556965888 1.0 9.850376516035027 -7.703105984827819 1.6562588267071066 1.1647379513283813 0.9867844960237154 0.17608645504789344 0.12603677841014785 0.3965708781776332 2.218747397703452 0.023141991351156962 0.0368298878829858 1.9810435147637667e-08 7.703105984827819 -0.1779534553046659 DNLAEDIMR ddPTM_A549_PD325901_60min_R1 2 DNLAEDIMR 9 0 P08670;B0YJC4 P08670 VIM Vimentin 0 ; 120.68 0.00037761 5268900.0 1582.52 1638.76 1522.16 1592.19 2048.19 1620.19 1317.45 1594.13 1818.49 1796.65 1944.9699999999998 False True 1743.1762654103504 1776.86405642872 1625.4629310916619 1690.5359601741502 1904.33220027191 1606.9957098122827 1367.5862806863015 1562.333826579208 1742.0651892693213 1683.209212381793 1705.7510201806679 1.0219406260274249 1.041690161932613 0.9529309447046368 0.9910801401690464 1.1164186201513802 0.9421044987222548 0.8017502346511574 0.915921378967565 1.0212892553831256 0.9867848193949856 1.0 10.736191363812546 -4.328192246169603 15.01809390939823 0.9925978984011042 0.9894431983473648 0.0 0.07742554646946424 0.0 0.0 0.010452561779887721 0.0 4.696861498234497e-05 4.328192246169603 -0.003154700053739412 DNLAQQSFNMEQANYTIQS(ph)LKDTK ddPTM_A549_MK2206_60min_R1 2 DNLAQQSFNMEQANYTIQSLKDTK 24 1 Q9NZZ3-2;Q9NZZ3 Q9NZZ3-2 CHMP5 Charged multivesicular body protein 5 1 DNLAQQSFNMEQANYT(0.002)IQS(0.872)LKDT(0.126)K;DNLAQQSFNMEQANY(0.007)T(0.021)IQS(0.948)LKDT(0.025)K 93.411 5.3102999999999996e-08 4936200.0 1003.1 1804.22 1875.69 1811.8 2959.0 2438.8 2504.3 2356.3900000000003 3918.0 3396.9 3488.3999999999996 True False 1172.3987565595917 1896.0470915533047 2141.69104653915 2255.691081334793 2523.735019763598 2696.8721972555804 2959.2988938157423 2690.415498641721 3030.5792557603468 2629.537930750489 2622.134005057838 0.44711626266931825 0.7230931325004812 0.8167740635711369 0.8602501157392366 0.9624737007702742 1.0285028118523234 1.1285841563045773 1.0260404286936422 1.1557682597131413 1.0028236259773031 1.0 11.356525701530776 -5.150266546660824 0.5595292613439176 1.0765907906294871 5.064853567062201e-13 0.9144399454462315 0.05672613793922964 0.8946611478175474 0.17125785377309607 0.01215123432683525 0.6408592156548711 7.075114185392364e-06 5.150266546660824 -1.0765907906289807 down DNLAQQSFNMEQANYTIQS(ph)LKDTK ddPTM_A549_PD325901_60min_R1 1 DNLAQQSFNMEQANYTIQSLKDTK 24 1 Q9NZZ3-2;Q9NZZ3 Q9NZZ3-2 CHMP5 Charged multivesicular body protein 5 1 DNLAQQSFNMEQANYT(0.002)IQS(0.985)LKDT(0.012)K 91.086 5.8093e-08 6604800.0 1460.7 1485.1 1607.2 1512.6 2003.7 1580.6 1524.8 1601.1 1809.9 2256.1 1999.3 True False 1608.9891886894948 1610.2545889589026 1716.2742568787232 1606.0298666361548 1862.9670243897424 1567.7281176462602 1582.8270984025758 1569.164804461349 1733.8361970967912 2113.649460971565 1753.3987746069142 0.9176401922889481 0.9183618765331335 0.9788271109425671 0.9159524290167265 1.0624890648776641 0.8941081403445839 0.9027194049211207 0.8949275128888647 0.9888430528220777 1.2054585024136415 1.0 10.775938429488356 -8.895486668186676 8.714218900817327 0.995091415369137 0.9376212492831404 0.24367455480295497 0.07847701922540137 0.2716987120583318 20.71935352147777 0.00789653235834643 0.008391823385768351 1.2720767992351245e-09 8.895486668186676 -0.05747016608599664 DNLLDTYSADQGDS(ph)SEGGTLAR ddPTM_A549_MK2206_60min_R1 2 DNLLDTYSADQGDSSEGGTLAR 22 0 Q6ZRP7 Q6ZRP7 QSOX2 Sulfhydryl oxidase 2 1 DNLLDTYSADQGDS(0.905)S(0.093)EGGT(0.002)LAR;DNLLDTYSADQGDS(0.986)S(0.014)EGGTLAR 276.77 7.424899999999998e-139 57359000.0 3018.0 2605.6 2442.4 2646.2 4328.6 3133.1000000000004 2359.9 3053.7 4595.7 4106.6 5025.9 True False 3527.3646169841973 2738.2139105825713 2788.769046093556 3294.519118792431 3691.8686740617454 3464.642562416538 2788.6632829596183 3486.571326564032 3554.7812878248637 3178.9162078424356 3777.8303222165423 0.9337011766358552 0.7248112480012063 0.738193303625484 0.872066460851386 0.9772457625613102 0.9170985107620584 0.7381653078911823 0.9229031028895914 0.940958429742072 0.8414661159205505 1.0 11.883342190519128 -8.487301536197846 0.27556500777028775 1.0219643910018226 0.7893308489108846 0.009801876839131585 0.09442196670729958 1.27725395986852 0.32109099070493025 0.09007511112441968 0.10302802738838361 3.2561054694463884e-09 8.487301536197846 -0.232633542090938 DNLLDTYSADQGDS(ph)SEGGTLAR ddPTM_A549_PD325901_60min_R1 3 DNLLDTYSADQGDSSEGGTLAR 22 0 Q6ZRP7 Q6ZRP7 QSOX2 Sulfhydryl oxidase 2 1 DNLLDTYSADQGDS(0.791)S(0.207)EGGT(0.002)LAR;DNLLDTYSADQGDS(0.981)S(0.019)EGGTLAR;DNLLDTYSADQGDS(0.408)S(0.408)EGGT(0.185)LAR 288.82 5.544699999999998e-156 114100300.0 7284.800000000001 6760.5 8174.0 6979.299999999999 9265.2 7643.3 8017.2 8481.3 8946.5 9576.1 9120.6 True False 8024.347533213684 7330.231060976817 8728.73679425503 7410.395509859653 8614.444315204786 7581.055498928042 8322.298933180175 8312.133818048864 8570.509717291809 8971.463411732551 7998.824020246996 1.0031909081762622 0.9164135931009603 1.0912525106391195 0.9264356224242607 1.0769638503609409 0.9477712573421444 1.0404403087396827 1.0391694825400337 1.071471218218795 1.1215977985043257 1.0 12.965572196553767 DNLTSAT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 DNLTSATLPR 10 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 DNLT(0.006)S(0.028)AT(0.966)LPR;DNLT(0.009)S(0.037)AT(0.955)LPR 77.64399999999999 0.0014704 7733300.0 1750.11 2349.7 1931.63 2123.2200000000003 2648.4 2072.22 2396.7 2544.6000000000004 2930.9 3499.1000000000004 3010.1000000000004 True False 2045.4857819185613 2469.2896936198463 2205.5641797026283 2643.4089953149696 2258.8238683142663 2291.5009449716913 2832.1493666127017 2905.3048425106736 2267.0558296855543 2708.650879769508 2262.6090954662873 0.904038521730162 1.0913461360018821 0.9747879932605402 1.1683012326838569 0.9983270520923806 1.0127692625134832 1.2517183689783768 1.284050721944056 1.0019653126243402 1.1971360343229323 1.0 11.14377164047945 -8.92788389543736 24.9999999998511 1.0008528218031991 1.0887275264640417 0.0 0.12454208331414804 70.76017543823613 24528.728008938302 0.019182503383414387 0.0204212733564775 1.180636225503279e-09 8.92788389543736 0.08787470466084257 DNLTSAT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 DNLTSATLPR 10 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 DNLT(0.009)S(0.035)AT(0.956)LPR;DNLT(0.018)S(0.04)AT(0.942)LPR 65.495 0.0058647 10944300.0 3133.2 4273.5 3901.2000000000003 4067.1 5129.0 4008.3 3536.2 4355.0 6076.0 6991.1 9409.8 True False 3451.2801574600676 4633.642842849554 4165.95889182135 4318.315529945728 4768.756734089424 3975.6577337476274 3670.7720260828896 4268.13610856859 5820.646849859168 6549.680752891412 8252.454253636837 0.4182125766936662 0.5614866439044504 0.5048145392609019 0.5232765183815052 0.5778592146679086 0.4817545922166808 0.444809739413604 0.5171959731479435 0.7053231282432159 0.7936645937788729 1.0 13.010607520747378 -9.572524580165812 0.652763844412795 0.9770047054407904 0.49616605320640506 0.787141702789319 0.07657486299187363 0.13513550813964953 0.12532585487501377 0.02739406447854249 0.015363532266293603 2.67593413659807e-10 9.572524580165812 -0.4808386522343854 down DNNLLGR ddPTM_A549_PD325901_60min_R1 2 DNNLLGR 7 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931;P17066 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6 0 ; 121.99 0.017828 22836000.0 9697.5 9281.5 9146.0 8859.7 11536.0 10322.4 9246.6 10832.9 11367.1 10232.5 10690.400000000001 False True 10681.983061077817 10063.684578427088 9766.70255936586 9406.9435471614 10725.751157039502 10238.337796780816 9598.484422933674 10616.829311254352 10889.380317155052 9586.418203710627 9375.548572029085 1.1393448584914099 1.073396879245123 1.04172065072584 1.003348601406213 1.1440131822300614 1.0920254658298894 1.0237784327169606 1.1323955318122387 1.1614659380723935 1.0224914446404394 1.0 13.194687391050454 -6.760385702535759 24.999995150619235 1.0832927684988154 1.0634679105916773 0.021530183511067946 0.05752862717112103 133.6496883165088 3170779.018590764 0.010077465708597853 0.02006526307491751 1.7362581505374158e-07 6.760385702535759 -0.01982485790713806 DNPAQDFSTLYGSS(ph)PLER ddPTM_A549_PD325901_60min_R1 2 DNPAQDFSTLYGSSPLER 18 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 DNPAQDFSTLYGS(0.141)S(0.859)PLER;DNPAQDFSTLYGS(0.155)S(0.845)PLER 261.31 4.1364999999999996e-88 16904400.0 3477.2 3833.7 3536.3 3980.2 4272.4 4521.5 4022.1000000000004 3820.3999999999996 3846.6 4081.1 5268.200000000001 True False 3830.2027842206517 4156.7793533713175 3776.2945834993943 4226.047914309944 3972.3213629798497 4484.678403098545 4175.163216477574 3744.1991249541775 3684.940778911828 3823.418649515116 4620.244797871329 0.8290042956133686 0.899688119401478 0.8173364721365489 0.9146805200142204 0.8597642628827816 0.9706581792299742 0.9036670997175699 0.8103897712690961 0.7975639690367877 0.827535945990712 1.0 12.173753577714399 -10.991578604348756 1.2870330118776578 0.9994832375373635 0.8626603084577557 0.0 0.07074011213001168 0.3208299423166108 0.9515508796903985 0.03789026800039203 0.008813101149843386 1.019580206257819e-11 10.991578604348756 -0.1368229290796078 DNPFFRS(ph)K ddPTM_A549_MK2206_60min_R1 1 DNPFFRSK 8 1 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 DNPFFRS(1)K 57.836000000000006 0.0044235 3683000.0 1683.4 2003.6 2279.5 1427.1 1597.1 1056.6 1527.8 1079.4 1705.3 2712.1 2664.6 True False 1967.5167648214713 2105.5746819324686 2602.7673765846134 1776.7395640649527 1362.1687056655762 1168.4087106856841 1805.3814838364767 1232.4082555238629 1319.052272804522 2099.4347263647446 2002.9062807811947 0.9823309176773262 1.0512597130162427 1.2994953391276274 0.8870807291951623 0.6800960777527189 0.5833566562235598 0.9013809089121847 0.6153099959540723 0.6585691429805949 1.0481941898678857 1.0 10.967879201361653 -6.479166050327175 8.456901556111305 0.7937059723946378 1.1038622338075903 0.4426830147446503 0.16010779680906817 0.2793631757890963 50.576718811228886 0.024244525235000033 0.056010211206274675 3.317675836199223e-07 6.479166050327175 0.3101562614129525 DNPFFRS(ph)K ddPTM_A549_PD325901_60min_R1 2 DNPFFRSK 8 1 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 DNPFFRS(1)K;DNPFFRS(1)K 58.172 0.004228 21519000.0 5483.7 5599.4 6404.2 6776.200000000001 6907.7 7885.6 7678.0 8074.4 7715.0 6511.6 6347.4 True False 6040.4011871134235 6071.28108909601 6838.827523583072 7194.750484133219 6422.526982271303 7821.3822880623475 7970.190491562812 7913.349757755734 7390.765379635199 6100.456464723396 5566.710039483782 1.0850935551285816 1.0906407996883953 1.2285223184028564 1.2924600766165308 1.1537383727044068 1.4050277870746881 1.431759591398066 1.4215487606912545 1.3276720589385265 1.0958818442947156 1.0 12.442609222276912 -4.0109790755348556 16.15483991851818 1.2095318906504218 1.1932452680392907 0.0 0.14872262869815703 0.0 0.0 0.023556775483539367 0.0 9.750366142022738e-05 4.0109790755348556 -0.01628662261113112 DNPFSLGES(ph)FGSR ddPTM_A549_PD325901_60min_R1 2 DNPFSLGESFGSR 13 0 A0A0D9SF70;G5E9L0;Q8N6H7-2;Q8N6H7;H0YDN9;E9PQP3;Q8N6H7-3;E9PMU9 A0A0D9SF70 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 DNPFS(0.006)LGES(0.926)FGS(0.068)R;DNPFSLGES(0.992)FGS(0.008)R 97.79700000000001 0.00016225 4354800.0 3125.3 2753.5 2585.9 2853.1000000000004 3262.6 3612.0 3200.5 2681.8 2895.8999999999996 3028.0 4034.2 True False 3442.578155275741 2985.547108409092 2761.3947242799213 3029.3295071397665 3033.44623135897 3582.585069554782 3322.296778880801 2628.3093951686 2774.195393763519 2836.8115632382887 3538.0189749008227 0.9730242205307118 0.8438471160242385 0.7804917791197907 0.8562219503711633 0.8573855179631995 1.012596341333983 0.9390274055762889 0.7428760031571838 0.7841098121417749 0.8018078996644753 1.0 11.788726070090659 -11.006582580785654 1.3240372545615722 0.9990624490589965 0.8561010392838798 0.0 0.09787523293588331 0.4639018418862689 1.4633667333292277 0.05825413023413618 0.013622523430672627 9.849573360622703e-12 11.006582580785654 -0.14296140977511673 DNPS(ph)PGPSR ddPTM_A549_MK2206_60min_R1 1 DNPSPGPSR 9 0 Q9NQS1 Q9NQS1 AVEN Cell death regulator Aven 1 DNPS(1)PGPSR 113.27 2.6667000000000002e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DNPS(ph)PGPSR ddPTM_A549_PD325901_60min_R1 2 DNPSPGPSR 9 0 Q9NQS1 Q9NQS1 AVEN Cell death regulator Aven 1 DNPS(1)PGPSR;DNPS(1)PGPSR 140.57 4.109e-05 62233000.0 6202.0 6585.9 6369.0 6208.1 8207.0 6549.9 6030.6 7576.799999999999 6706.5 8306.9 9092.900000000001 True False 6831.6224743289085 7140.916906218061 6801.238639908282 6591.560237381935 7630.568632612973 6496.559786012423 6260.097783070945 7425.674780115383 6424.649127481973 7782.400916335578 7974.530944642225 0.8566801636049588 0.8954654456530466 0.8528700543168332 0.8265765451459619 0.9568673926508057 0.8146635621719176 0.7850114102669399 0.9311738623453965 0.805646021324733 0.9759070433558563 1.0 12.961183947898245 -10.915347897322656 1.0981466035279757 1.0022650952274867 0.8554682337468853 0.4935909900153198 0.050447010212723284 0.3228853763535764 0.6737074531888707 0.037218511571550164 0.00826913553721379 1.2152121489206858e-11 10.915347897322656 -0.14679686148060145 DNQDREENDKDPERER ddPTM_A549_MK2206_60min_R1 1 DNQDREENDKDPERER 16 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 45.33 0.011948 5774900.0 484.9 642.21 438.34 563.4 518.58 661.17 643.28 772.94 655.73 739.05 982.8 False True 566.7392653332136 674.8957458993069 500.5032032691816 701.4330252919872 442.2975689587722 731.134570550874 760.1556492488082 882.5066120294738 507.20820198563837 572.0980917074833 738.7436360998865 0.7671663587184986 0.9135723313466938 0.677505942266429 0.9494945079934949 0.5987159108318445 0.9896999917465499 1.0289843622368973 1.1946046895084845 0.6865821608472822 0.7744203316969476 1.0 9.528929987035548 DNQDREENDKDPERER ddPTM_A549_PD325901_60min_R1 2 DNQDREENDKDPERER 16 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 43.297 0.019150999999999998 9147900.0 1035.82 1065.57 990.8900000000001 850.29 1198.19 970.13 797.6 1247.12 986.21 995.01 883.0 False True 1140.9756838696183 1155.36932351824 1058.1377541056236 902.8104821512997 1114.0332679311 962.2295829255769 827.9531044634673 1222.2452132532867 944.7630233376577 932.1848987905307 774.3965977981815 1.4733738333997335 1.4919607431169852 1.3664028962862116 1.165824442821977 1.4385823376530802 1.2425539906314869 1.0691590159584397 1.578319451206862 1.2199989333939147 1.2037564491385733 1.0 9.59692880412474 -14.151683087449486 0.08807333430793406 1.222783747880598e-12 1.6511361928271209 0.2659415719218774 0.15239278718314808 67.4636186318581 0.5176021392432418 13.612088116847234 1.5779183672262695 7.052074839309346e-15 14.151683087449486 1.651136192825898 DNQESS(ph)DAELSSSEYIK ddPTM_A549_PD325901_60min_R1 2 DNQESSDAELSSSEYIK 17 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 DNQES(0.119)S(0.88)DAELS(0.001)SSEYIK;DNQES(0.124)S(0.876)DAELSSSEYIK 189.9 1.3659e-39 49744000.0 5960.5 4867.2 6131.700000000001 5901.6 6736.8 5853.299999999999 6111.4 6171.5 6486.5 6443.0 6431.7 True False 6565.6055721118155 5277.376025439884 6547.834034907463 6266.128428493937 6263.63040869831 5805.632665455427 6343.9726712864 6048.404591051913 6213.894962411366 6036.187880430743 5640.641673905512 1.1639820346123617 0.9355985241632788 1.1608314112911593 1.1108892907489627 1.1104464298228411 1.0292503940310884 1.1246898913353436 1.072290164970552 1.1016290914485514 1.070124327938626 1.0 12.461643576205256 -10.775308528908345 0.8453879303600835 0.9954587789931235 1.0883449737077537 0.058988000630391 0.06402455119060975 0.7917329089619398 0.9229932219278294 0.048872493115347304 0.010188237917016492 1.677611795671457e-11 10.775308528908345 0.09288619471463022 DNQESSDAELS(ph)SSEYIK ddPTM_A549_MK2206_60min_R1 2 DNQESSDAELSSSEYIK 17 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 DNQESSDAELS(0.752)S(0.124)S(0.124)EYIK;DNQES(0.011)S(0.008)DAELS(0.911)S(0.029)S(0.042)EYIK 111.33 4.631e-09 28664000.0 2486.4 2325.54 2087.79 2215.19 3591.4 2415.8 2795.4 2705.1 3978.1 3833.1 3642.6 True False 2906.043533356365 2443.900052815549 2383.8700158629476 2757.9116494436585 3063.1098174988115 2671.438352521744 3303.287995756311 3088.556209021306 3077.0667017203236 2967.2000477964334 2738.0418893543415 1.0613583176558485 0.8925721926744684 0.8706477520053898 1.007256923338745 1.1187227738948597 0.975674756076028 1.2064417307126227 1.1280164197011682 1.123820170058073 1.0836941755102694 1.0 11.418928803245294 -6.519733139002421 6.309355532929302 1.073344317527935 0.9365290160989582 0.4249665829637226 0.0752047875916154 0.12279007665141016 21.984188949024563 0.011470502626320456 0.025250949931812715 3.021807960847297e-07 6.519733139002421 -0.1368153014289767 DNS(ph)ILEIR ddPTM_A549_MK2206_60min_R1 2 DNSILEIR 8 0 A0A6E1VY70;Q9NZU1;Q9NZU0 A0A6E1VY70 FLRT1;FLRT3 Leucine-rich repeat transmembrane protein FLRT1;Leucine-rich repeat transmembrane protein FLRT3 1 DNS(1)ILEIR;DNS(1)ILEIR 127.83 0.0010638 9267200.0 1752.33 1542.08 1416.68 1193.34 1890.67 1828.86 1750.42 1573.95 2365.7 1977.1000000000001 2224.5 True False 2048.0804636447715 1620.565285243771 1617.5865264575095 1485.7083535710683 1612.5549475554035 2022.3887513009834 2068.448656196523 1797.0622325197173 1829.8727272466183 1530.4717368444153 1672.0952569232775 1.2248587245043216 0.9691823946834682 0.9674009418781163 0.8885309299332811 0.964391795789535 1.209493743210695 1.2370399638610015 1.074736756221882 1.0943591399294186 0.9153017631666182 1.0 10.707441322736532 DNS(ph)ILEIR ddPTM_A549_PD325901_60min_R1 2 DNSILEIR 8 0 A0A6E1VY70;Q9NZU1;Q9NZU0 A0A6E1VY70 FLRT1;FLRT3 Leucine-rich repeat transmembrane protein FLRT1;Leucine-rich repeat transmembrane protein FLRT3 1 DNS(1)ILEIR;DNS(1)ILEIR 109.39 0.0016762 13574100.0 2835.1000000000004 2385.5 2819.5 2750.7 3274.6 2725.3 2963.3999999999996 2738.7 3814.8 3628.1000000000004 3592.7 True False 3122.9172649096886 2586.5344569129766 3010.848225030837 2920.604491707039 3044.603392756725 2703.1060603703354 3076.1738086346995 2684.074480031413 3654.4772223243504 3399.0211468245802 3150.8206760017283 0.9911440815072192 0.8209081769119245 0.9555758751880126 0.9269345329462466 0.966289010334987 0.8579053961904536 0.9763087541174343 0.8518651983195061 1.1598493212129555 1.0787732772966974 1.0 11.621511932637054 -8.75743054309738 24.99999114257188 1.0754844023338619 0.9181571594560228 0.5694736201065176 0.06238519838899776 60.93514828156344 380005.15286861226 0.012210701150731681 0.013598768731958994 1.7481128164949673e-09 8.75743054309738 -0.15732724287783906 DNS(ph)MQSR ddPTM_A549_PD325901_60min_R1 1 DNSMQSR 7 0 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 DNS(1)MQSR 48.091 0.057892 3492300.0 769.88 868.44 1041.3 926.58 827.1 681.62 624.7 799.14 1042.3 1131.6 1167.3 True False 848.0376508442992 941.626486590445 1111.968879845579 983.812742184139 769.0073493400979 676.0691127103905 648.4733003489564 783.2005257867975 998.495755695887 1060.1505828799357 1023.729500124369 0.8283805934490256 0.9198000902348231 1.0861940382791453 0.9610084910756399 0.7511821718986061 0.6603981936910653 0.6334420374426798 0.7650463581362552 0.9753511602181861 1.0355768616134848 1.0 9.999618847282925 -8.825030403002984 7.720820865793229 0.9887997914919311 0.8277219184614907 0.28582026924512816 0.12469277507957298 0.27718813340723525 29.131145176579793 0.024579053414316262 0.026145135110621512 1.4961309150333051e-09 8.825030403002984 -0.1610778730304404 DNS(ph)PEPNDPEEPQEVSSTPSDKK ddPTM_A549_MK2206_60min_R1 2 DNSPEPNDPEEPQEVSSTPSDKK 23 1 G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58-7;Q9HB58;Q9HB58-6 G5E9C0 SP110 Sp110 nuclear body protein 1 DNS(1)PEPNDPEEPQEVSSTPSDKK;DNS(1)PEPNDPEEPQEVSSTPSDKK 143.92 1.8333e-27 16826600.0 2127.16 1793.56 2179.1 1989.6100000000001 3566.6000000000004 3003.1 2493.9 2791.3 4051.5 2794.5 3472.2 True False 2486.1726039311156 1884.8445430858458 2488.129146881128 2477.0645393169866 3041.9578646464524 3320.8860487035563 2947.009348435522 3186.975322997736 3133.841718916038 2163.2205091354613 2609.9569121550935 0.9525722790106268 0.7221745823878342 0.9533219247005231 0.9490825414706272 1.165520338852892 1.272391139193725 1.1291409964320513 1.221083500710434 1.200725461911309 0.8288338014550772 1.0 11.349810274164799 -6.49058561231808 2.26869451637351 1.126471951787685 0.8550953708624425 0.41137968727454755 0.12812370888104632 0.18340730577660344 1.8603326600491585 0.015970737488904325 0.04177745559875635 3.2315761011449546e-07 6.49058561231808 -0.27137658092524264 DNS(ph)PSLK ddPTM_A549_MK2206_60min_R1 2 DNSPSLK 7 0 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 DNS(0.993)PS(0.007)LK;DNS(0.996)PS(0.004)LK 121.8 0.0064602 134981000.0 13177.4 13259.7 11435.7 10964.6 15318.0 12955.9 13378.9 14322.4 17604.800000000003 17936.0 17084.8 True False 15401.42296350151 13934.562093242137 13057.454217332168 13650.927492219593 13064.742491631901 14326.884738569608 15809.67295071335 16352.644060510444 13617.340909088753 13884.245142906993 12842.172643507662 1.1992848399595122 1.0850626665797654 1.0167636411533014 1.0629764815629383 1.0173311677317125 1.1156122204767696 1.2310746311844596 1.2733549465851088 1.0603611465987397 1.0811445639555508 1.0 13.648601678337894 -8.983867482902971 15.516943801871571 1.0266199689181168 1.1208400719803961 0.1539367422688196 0.08059390460352586 1.9953121121649289 1918.9823413340987 0.01546911718287313 0.015757540216025864 1.037845047131427e-09 8.983867482902971 0.09422010306227935 DNS(ph)PSLK ddPTM_A549_PD325901_60min_R1 2 DNSPSLK 7 0 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 DNS(0.986)PS(0.014)LK;DNS(0.696)PS(0.304)LK 101.82 0.010837000000000001 161633000.0 20110.0 20050.3 18491.7 19084.2 23551.0 18095.300000000003 18979.8 18991.0 18580.199999999997 21089.9 21217.0 True False 22151.552395800445 21740.00914753398 19746.657961625366 20262.987690637114 21896.859006539293 17947.937876277592 19702.08667514508 18612.209606848704 17799.33880838598 19758.28011477514 18607.443505644427 1.1904672659132858 1.1683501358442556 1.0612235880568637 1.0889721462537554 1.176779550608177 0.9645568920219062 1.0588282409224352 1.0002561394961555 0.9565708907291152 1.0618481850438841 1.0 14.183592235318208 -7.079409657981788 0.6392673458229536 0.9783906307388497 1.1651246343921962 0.5226766100481552 0.05503576556257595 0.3794752846845739 0.28307157174198305 0.009753080981528802 0.03376970329876736 8.328951669720291e-08 7.079409657981788 0.18673400365334647 DNS(ph)PSLKEIR ddPTM_A549_MK2206_60min_R1 2 DNSPSLKEIR 10 1 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 DNS(0.5)PS(0.5)LKEIR;DNS(0.678)PS(0.322)LKEIR 49.928999999999995 0.007859999999999999 8160100.0 3562.9 4046.4 3912.3 3404.6 5043.6 3989.1000000000004 3404.6000000000004 3572.0 6337.5 6509.6 6808.299999999999 True False 4164.230415458249 4252.344476428203 4467.12296881421 4238.7271528383 4301.693121216519 4411.223914249726 4023.171750143781 4078.341938791213 4902.066368907908 5039.0768388864535 5117.611210479096 0.8137058960108862 0.8309237066936374 0.8728922118325614 0.8282628317209509 0.8405666128775356 0.8619693315539613 0.786142515458329 0.7969229726635311 0.9578817474196112 0.9846540957562717 1.0 12.321254833364293 -8.850410565567044 5.037201696209958 0.9816429096078658 0.8306331340877363 0.8807925228861301 0.024966228860790286 0.051557654023906004 2.1892755166866693 0.004948944758344201 0.0052510025054469806 1.4112028160867653e-09 8.850410565567044 -0.1510097755201295 DNSISPES(ph)DVDTASTISLVTGETERK ddPTM_A549_MK2206_60min_R1 1 DNSISPESDVDTASTISLVTGETERK 26 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 DNS(0.004)IS(0.053)PES(0.88)DVDT(0.019)AS(0.019)T(0.019)IS(0.005)LVT(0.001)GETERK 49.942 0.0038573 2859500.0 932.91 1319.2 1265.3 956.38 1709.8 1027.6 962.36 939.52 1934.4 1795.0 1819.5 True False 1090.3624005403344 1386.3416452412218 1444.738566173509 1190.6931429335302 1458.2906849583637 1136.3399499343263 1137.208355010389 1072.6998371593281 1496.2614886020456 1389.5082533183574 1367.6679343546423 0.7972420593854463 1.0136536877245652 1.056351859894437 0.8706010523639127 1.0662607847470544 0.8308595393592583 0.8314944925187563 0.7843276940359796 1.0940239593378216 1.0159690217304254 1.0 10.417502275402411 -8.786320407245709 24.999895046561193 1.0444002082469421 0.9140531126691418 0.25800100236629875 0.09755062227858226 225.85025740426627 226928.1787927429 0.017434023221670935 0.01856374105897435 1.6356093809202835e-09 8.786320407245709 -0.13034709557780033 DNSPS(ph)LKEIR ddPTM_A549_PD325901_60min_R1 2 DNSPSLKEIR 10 1 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 DNS(0.402)PS(0.598)LKEIR;DNS(0.294)PS(0.706)LKEIR 79.46600000000001 0.00035081 16797300.0 3883.2000000000003 3807.6 4209.0 4579.1 4644.8 5885.3 4847.6 5586.200000000001 4985.6 5394.700000000001 5283.3 True False 4277.419605339252 4128.479814773362 4494.648050773111 4861.940607109357 4318.565271690108 5837.372068064993 5032.078070708502 5474.778858710875 4776.072569891024 5054.077721334741 4633.487593598111 0.9231533524011539 0.8910091440576 0.970035628666228 1.0493047642615663 0.932033416396082 1.259822531116785 1.0860238576361156 1.1815676093047363 1.0307727113567577 1.0907718255936936 1.0 12.177882793463622 -6.075358242816128 1.8081829579538293 1.0467369323521674 0.9024189859342581 0.3423960728226163 0.08719406055641335 0.38772979964610493 2.379822641014186 0.01311991985346994 0.055000629479398204 8.40701373955657e-07 6.075358242816128 -0.1443179464179093 DNT(ph)LGR ddPTM_A549_PD325901_60min_R1 1 DNTLGR 6 0 H0YAB2;Q9Y4D7-2;Q9Y4D7 H0YAB2 PLXND1 Plexin-D1 1 DNT(1)LGR 70.85600000000001 0.053265999999999994 26850000.0 3954.7 4116.2 4300.2 3730.0 4956.6 4037.9 4273.9 4631.3 4717.7 4698.9 5120.2 True False 4356.178232703732 4463.086619805155 4592.037431203263 3960.3936285553737 4608.465515341713 4005.016681161479 4436.545603267819 4538.925088315434 4519.431475243677 4402.210652080711 4490.44785962203 0.9700988339881093 0.9939067904422395 1.0226234831707375 0.8819596067837938 1.0262819343212723 0.8918969346408555 0.9879962404554571 1.0107956333552628 1.0064545044342386 0.9803500206884161 1.0 12.132643625538012 -7.993316003030592 24.991466657735337 1.0035085714047811 0.9652069935486387 0.12396911028902124 0.043473409421148815 229.26266572252078 857208.1256294488 0.006104800017928884 0.008424100520376464 1.0155095150206994e-08 7.993316003030592 -0.03830157785614241 DNTFFRES(ph)PVGR ddPTM_A549_MK2206_60min_R1 4 DNTFFRESPVGR 12 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 DNTFFRES(1)PVGR;DNT(0.001)FFRES(0.999)PVGR;DNT(0.004)FFRES(0.996)PVGR;DNTFFRES(1)PVGR 159.18 1.8507e-14 1164640900.0 8701.2 8125.2 7089.379999999999 7073.47 11145.9 7698.7 7615.34 7573.3 11090.5 11473.4 11804.799999999997 True False 10169.749836084462 8538.737974464813 8094.760686208134 8806.47046754013 9506.352874884451 8513.371324016533 8998.948703442393 8646.83846725854 8578.51945788926 8881.55097137763 8873.342364094358 1.1461013695623836 0.9622910538216682 0.9122560985546184 0.9924637308231424 1.0713384522783147 0.9594323057414718 1.0141554708692742 0.974473666456018 0.966774311853661 1.0009250862805077 1.0 13.115261918368201 -8.266448772825921 24.24236885009965 0.9831339657356646 1.002765272196819 0.02754612621412389 0.05887955469036947 1042.0846720998964 5043036.466076037 0.009326211856613014 0.01146378239079951 5.414411097629893e-09 8.266448772825921 0.019631306461154407 DNTFFRES(ph)PVGR ddPTM_A549_PD325901_60min_R1 7 DNTFFRESPVGR 12 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNT(0.01)FFRES(0.99)PVGR;DNT(0.007)FFRES(0.993)PVGR 154.99 2.7676e-14 2174709900.0 18428.7 20021.7 22107.2 21296.9 23730.499999999996 20989.0 22546.7 21567.899999999998 22774.4 23666.999999999996 23683.6 True False 20299.568057508102 21708.998925162257 23607.52753339304 22612.3611442308 22063.751545780684 20818.072542880782 23404.72700652766 21137.71131480977 21817.27116810937 22172.661580964508 20770.667342710083 0.9773190106302808 1.0451758033080965 1.1365801177148318 1.08866801297875 1.0622553036806706 1.0022823147368607 1.1268163232483746 1.0176712652532327 1.0503885507446933 1.0674987575084576 1.0 14.342259948960308 -10.300017643085887 0.4804264764057809 0.992975853618845 1.0626771639876158 0.0 0.05000227613156139 1.6833106927437027 0.6420280827838227 0.053259742917062126 0.012327965337245301 5.011668734565412e-11 10.300017643085887 0.06970131036877081 DNTFFRES(ph)PVGRK ddPTM_A549_MK2206_60min_R1 4 DNTFFRESPVGRK 13 2 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 DNT(0.004)FFRES(0.996)PVGRK;DNT(0.015)FFRES(0.985)PVGRK;DNT(0.001)FFRES(0.999)PVGRK;DNT(0.002)FFRES(0.998)PVGRK 74.141 0.00024028 79558700.0 5987.200000000001 7601.1 7864.5 6903.000000000001 10079.4 7515.3 6368.900000000001 6503.94 12041.7 11971.0 13348.099999999999 True False 6997.692987013851 7987.963523076907 8979.804357600222 8594.235309887443 8596.733612100437 8310.564057747602 7526.046689623078 7425.893412480883 9314.274176643534 9266.742785779421 10033.398381181209 0.69743996213076 0.7961373823309209 0.8949913096686041 0.8565627500655131 0.8568117486717759 0.828290051089272 0.7500994581994316 0.7401174687141895 0.928326955910923 0.92358963869712 1.0 13.292522719026229 -8.93279193009493 4.487261225891332 0.9696981862470468 0.808320239012638 0.5660276959446274 0.05767585128608041 0.10703791758207375 3.9887071485152084 0.01101887629423418 0.011509987483199223 1.1673687679204892e-09 8.93279193009493 -0.1613779472344088 DNTFFRES(ph)PVGRK ddPTM_A549_PD325901_60min_R1 6 DNTFFRESPVGRK 13 2 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 DNT(0.002)FFRES(0.998)PVGRK;DNT(0.002)FFRES(0.998)PVGRK;DNTFFRES(1)PVGRK;DNT(0.008)FFRES(0.992)PVGRK;DNT(0.002)FFRES(0.998)PVGRK;DNT(0.002)FFRES(0.998)PVGRK 87.429 3.9871e-05 152750100.0 14136.880000000001 13253.43 13364.460000000001 14919.3 15634.220000000001 20066.100000000002 16761.7 17851.98 18419.899999999998 17010.7 20018.100000000002 True False 15572.045650579 14370.343059016637 14271.452622626577 15840.831276811296 14536.126322330983 19902.688334494243 17399.57566585418 17495.908254292608 17645.77565992772 15936.641498935778 17556.000605191148 0.8869927724868323 0.8185430943063113 0.8129102375632545 0.9023029580055555 0.8279862053566337 1.1336686972207783 0.9910899445235428 0.9965771047603649 1.0051136393051858 0.9077603639534769 1.0 14.099676604592284 -7.234752742356816 24.986361820717672 1.0092441662442937 0.8488867655123602 0.6653036632776915 0.055045620349367747 264.76151913112267 247893.03362771682 0.006281057894009294 0.010877267080910757 5.824347219812651e-08 7.234752742356816 -0.1603574007319335 DNTRPGANS(ph)PEMWSEAIK ddPTM_A549_MK2206_60min_R1 3 DNTRPGANSPEMWSEAIK 18 1 F1T0B3;A0A087X2G1;Q92499-3;Q92499-2;Q92499 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 1 DNT(0.161)RPGANS(0.829)PEMWS(0.01)EAIK;DNT(0.002)RPGANS(0.996)PEMWS(0.002)EAIK;DNTRPGANS(1)PEMWSEAIK 162.01 1.9524e-23 52113000.0 10013.0 10372.8 7798.4 7757.8 16163.099999999999 12166.3 11149.5 10872.599999999999 15808.0 16227.0 16893.9 True False 11702.94960565368 10900.731214189012 8904.330383661965 9658.461348260871 13785.529401129092 13453.729790663676 13175.21982853437 12413.824345941024 12227.513240188757 12561.309429859053 12698.678382079635 0.9215879994384985 0.8584146228612354 0.7012013467659555 0.760587917707317 1.085587727033328 1.0594590543886495 1.0375268537493814 0.9775682139851185 0.9628965213769185 0.9891824213443788 1.0 13.63239073553619 -6.753651876186672 24.999998284585956 0.9978291755169675 0.8060708076970002 0.7053680015256237 0.06319985143136869 84.3524609267591 270791.9348405338 0.009623654482741849 0.019742881188939167 1.76338898567723e-07 6.753651876186672 -0.19175836781996725 DNTRPGANS(ph)PEMWSEAIK ddPTM_A549_PD325901_60min_R1 4 DNTRPGANSPEMWSEAIK 18 1 F1T0B3;A0A087X2G1;Q92499-3;Q92499-2;Q92499 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 1 DNT(0.001)RPGANS(0.999)PEMWS(0.001)EAIK;DNT(0.001)RPGANS(0.999)PEMWSEAIK;DNT(0.005)RPGANS(0.995)PEMWSEAIK;DNT(0.001)RPGANS(0.999)PEMWSEAIK 121.25 7.6475e-11 83862000.0 19183.600000000002 17626.9 17039.9 18847.9 19507.3 20558.600000000002 17751.3 15829.000000000002 23492.6 21626.4 24425.899999999998 True False 21131.104949780103 19112.380724610928 18196.330083242756 20012.091976313342 18137.174544531626 20391.177577782113 18426.835435384088 15513.278177389717 22505.28771971714 20260.905413215474 21421.669148537487 0.9864359683298899 0.8921984833248058 0.8494356792213396 0.934198536890372 0.8466741979240165 0.9518948984035762 0.8601960616426632 0.7241862466375011 1.0505851604590595 0.9458135718895995 1.0 14.386783276934452 -8.818649949371913 24.999999919811497 1.0238875785359198 0.8823405450250997 0.34707787829783865 0.0698682038476682 47.61957183375031 20808.620528275027 0.011159371392679274 0.011880057665525506 1.5182736353805185e-09 8.818649949371913 -0.1415470335108201 DNVNSENELIEQKEQS(ph)DNETAGGTK ddPTM_A549_MK2206_60min_R1 1 DNVNSENELIEQKEQSDNETAGGTK 25 1 O00507-2;O00507 O00507-2 USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-Y 1 DNVNSENELIEQKEQS(0.99)DNET(0.01)AGGTK 71.068 2.0978e-05 3723300.0 901.17 1265.6 983.98 854.26 1390.4 895.32 1100.2 894.03 1565.2 1554.3 1475.5 True False 1053.2654645088305 1330.013634185333 1123.523159996371 1063.5537383491885 1185.8740018517433 990.0621681346839 1300.0920987805289 1020.7614903520457 1210.684699110795 1203.1825504917686 1109.0926282716546 0.9496641106975692 1.19919076214396 1.0130111149933474 0.958940408797567 1.0692290000157518 0.8926776203332442 1.1722123704009437 0.9203572941808666 1.0915992661473692 1.0848350442710437 1.0 10.115164144992752 -14.999804975943944 0.0034288682744550037 0.5571687789162004 1.4907452358625526 0.0 0.09607115186500323 988797.3158528741 264.17016073318104 37819.60761417935 34192.11943056099 1.0004491603265552e-15 14.999804975943944 0.9335764569463522 DPAQPMS(ph)PGEATQSGAR ddPTM_A549_MK2206_60min_R1 10 DPAQPMSPGEATQSGAR 17 0 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.94)PGEAT(0.057)QS(0.003)GAR;DPAQPMS(0.995)PGEAT(0.005)QSGAR;DPAQPMS(0.957)PGEAT(0.029)QS(0.013)GAR;DPAQPMS(0.923)PGEAT(0.074)QS(0.002)GAR;DPAQPMS(0.912)PGEAT(0.068)QS(0.02)GAR;DPAQPMS(0.969)PGEAT(0.029)QS(0.002)GAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(0.999)PGEAT(0.001)QSGAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(1)PGEATQSGAR 293.47 9.814599999999999e-133 651391800.0 21248.84 23529.769999999997 21527.75 21532.129999999997 30019.050000000003 24662.050000000003 22251.14 24013.26 31721.86 32430.15 33079.52 True False 24835.124707739727 24727.33478922646 24580.7086603507 26807.502816614044 25603.28751099508 27271.771761656142 26293.884114578606 27417.213142524506 24536.909359401194 25104.15659128266 24864.962235692834 0.9988000171618892 0.9944650048062887 0.9885681074981044 1.0781236087353778 1.029693400227345 1.0967952214505443 1.0574672853045641 1.1026444714711048 0.9868066207709445 1.009619735325657 1.0 14.601826619561226 DPAQPMS(ph)PGEATQSGAR ddPTM_A549_PD325901_60min_R1 8 DPAQPMSPGEATQSGAR 17 0 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.995)PGEAT(0.005)QSGAR;DPAQPMS(0.982)PGEAT(0.018)QSGAR;DPAQPMS(0.999)PGEAT(0.001)QSGAR;DPAQPMS(0.996)PGEAT(0.004)QSGAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(0.999)PGEAT(0.001)QSGAR;DPAQPMS(1)PGEATQSGAR;DPAQPMS(1)PGEATQSGAR 205.15 1.088e-48 867756000.0 22034.5 22249.4 23173.4 24819.6 27520.300000000003 26729.4 25623.0 25368.8 24722.199999999997 26466.8 28840.300000000003 True False 24271.426219058423 24124.435022276095 24746.086276974496 26352.65032259864 25587.369067880918 26511.724628504322 26598.097286443608 24862.799382561403 23683.211907766323 24795.681731147648 25293.125933724707 0.9596056368302032 0.953794129104053 0.9783720028048881 1.0418898158989993 1.0116333242054467 1.0481790466695455 1.051593913545455 0.9829864227817913 0.93634974063005 0.980332830197402 1.0 14.626457727756375 -2.854984753410387 16.512646998321664 0.985395689146228 0.42736627043555486 0.0 0.03880873891566853 0.0 0.0 0.006020657311603051 0.0 0.0013964173836199998 2.854984753410387 -0.5580294187106731 DPAQPMS(ph)PGEATQSGARPADR ddPTM_A549_MK2206_60min_R1 9 DPAQPMSPGEATQSGARPADR 21 1 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(0.718)PGEAT(0.141)QS(0.141)GARPADR;DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(0.991)PGEAT(0.007)QS(0.002)GARPADR;DPAQPMS(0.978)PGEAT(0.011)QS(0.011)GARPADR;DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(1)PGEATQSGARPADR 182.23 7.477e-45 1146628700.0 29958.67 33208.130000000005 33118.619999999995 29664.34 46726.79 33542.71 32383.66 30711.52 54176.77 52855.2 52060.11 True False 35014.96107684097 34898.28197360855 37815.33831695668 36932.10463168281 39853.34108960442 37092.17730835112 38267.351841115305 35064.97201008543 41905.81809752409 40915.17361046933 39132.14790105826 0.8947876095473423 0.8918059407790592 0.9663496727184256 0.9437791333371721 1.0184296857501822 0.9478697004349211 0.9779006237498257 0.8960656107797538 1.070879579712281 1.0455642177863393 1.0 15.256066679186581 -5.402457056165257 0.2980798210278827 1.0304415633373287 0.7886839299239002 0.41019633151027735 0.044899115307252616 5.00578620671575 0.33692416713619944 0.02078635036659686 0.43412677659440463 3.958612063824801e-06 5.402457056165257 -0.24175763341342849 DPAQPMS(ph)PGEATQSGARPADR ddPTM_A549_PD325901_60min_R1 9 DPAQPMSPGEATQSGARPADR 21 1 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.999)PGEAT(0.001)QSGARPADR;DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(0.989)PGEAT(0.005)QS(0.005)GARPADR;DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(0.998)PGEAT(0.001)QSGARPADR;DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(0.989)PGEAT(0.005)QS(0.005)GARPADR;DPAQPMS(1)PGEATQSGARPADR;DPAQPMS(1)PGEATQSGARPADR 193.98 2.1791999999999998e-46 1655437500.0 52241.58 53600.93 55568.8 57699.01 66577.48 64772.09 62940.9 65112.86 66724.9 69509.19 75240.03 True False 57545.10674338146 58118.06848358016 59340.03293033996 61262.94680374067 61901.30748463723 64244.60757415797 65336.150392082025 63814.132927249484 63920.68449509015 65120.36788088735 65985.98329584728 0.8720807642644156 0.8807638468158998 0.8992823925088713 0.928423640048964 0.9380978261262477 0.9736099147923298 0.9901519554410254 0.9670861861850215 0.9687009468132438 0.9868818289623881 1.0 16.009871980123975 -6.347234703353871 0.5771045170177411 0.9866460095267123 0.848843144575546 0.9493410168922816 0.009724205408145864 0.27855432363634736 0.12214791817463017 0.0024744975331523135 0.020346356615302364 4.495368485345323e-07 6.347234703353871 -0.13780286495116634 DPAQPMSPGEAT(ph)QSGARPADR ddPTM_A549_MK2206_60min_R1 1 DPAQPMSPGEATQSGARPADR 21 1 Q9BQG0;Q9BQG0-2 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 DPAQPMS(0.062)PGEAT(0.469)QS(0.469)GARPADR 61.102 0.007458800000000001 6187800.0 840.25 1054.6 977.78 850.06 1010.6 1047.6 835.37 1204.6 2118.8 1040.3 1414.0 True False 982.0636578598322 1108.2746354392007 1116.4439067676701 1058.3247381606436 861.9420787337249 1158.4563366594 987.1459157955735 1375.355738932782 1638.895183028337 805.2955074802717 1062.864775585307 0.923977988939394 1.0427240236923714 1.0504101108749773 0.9957284900874026 0.8109611857811956 1.0899376508375225 0.9287596488950949 1.2940082036074534 1.5419602010291638 0.7576650633066705 1.0 10.053742344370145 -8.264542950237901 24.249944329551923 1.265932711452455 0.9814330257230528 0.03952027785195866 0.20486445417186844 167.75873291149114 1310791.6739622448 0.033041587496833405 0.04081973629159311 5.43822346891991e-09 8.264542950237901 -0.2844996857294022 DPDANWDS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 DPDANWDSPSR 11 0 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 DPDANWDS(0.993)PS(0.007)R;DPDANWDS(0.995)PS(0.005)R 56.413999999999994 0.012997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DPEDRIPS(ph)PLGYAAIPIK ddPTM_A549_MK2206_60min_R1 2 DPEDRIPSPLGYAAIPIK 18 1 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A 1 DPEDRIPS(1)PLGYAAIPIK;DPEDRIPS(1)PLGYAAIPIK 87.32600000000001 2.1396000000000002e-06 12677000.0 1662.7 1447.1100000000001 1288.8899999999999 1332.67 2044.1999999999998 1604.56 1266.23 1427.0500000000002 2253.35 1842.09 2012.7 True False 1943.3231108878813 1520.761717893439 1471.6739828936795 1659.1742098258298 1743.5008879353663 1774.3534741792732 1496.2876006533988 1629.3387076573356 1742.9698228605353 1425.960589612933 1512.8910423059021 1.2845096286153745 1.0052024074222428 0.9727560952774227 1.0966911452505974 1.1524299101394477 1.1728230418198908 0.9890253553043735 1.0769702920402962 1.15207888348916 0.9425401762175336 1.0 10.563092373746626 -11.027903332333706 1.3142903166779187 0.9999129182425964 1.0999263963176393 0.2233011612378687 0.08881919930256375 0.6931227205375584 2.130071657933509 0.061481851562475105 0.013787990943461888 9.377707178868048e-12 11.027903332333706 0.1000134780750429 DPEDRIPS(ph)PLGYAAIPIK ddPTM_A549_PD325901_60min_R1 3 DPEDRIPSPLGYAAIPIK 18 1 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A 1 DPEDRIPS(1)PLGYAAIPIK;DPEDRIPS(1)PLGYAAIPIK;DPEDRIPS(0.999)PLGY(0.001)AAIPIK 113.51 1.9911999999999998e-10 18470500.0 3124.0699999999997 3449.05 3736.81 3409.52 3648.69 3678.7699999999995 3786.0699999999997 3753.06 3761.65 4029.16 4132.96 True False 3441.223286581218 3739.713547942027 3990.4123978639755 3620.1183068182627 3392.418601697161 3648.8113168123036 3930.150965666998 3678.2022740813854 3603.560931990244 3774.7581499792504 3624.632120992041 0.949399324320774 1.0317498226326176 1.1009151452235717 0.9987546835035653 0.9359345965208397 1.006670799963458 1.0842896146357988 1.0147794731440725 0.9941866682470303 1.0414182802491196 1.0 11.823618862092312 -8.719337537053242 7.070808817045778 0.9972565384819273 1.0175913634859037 0.0 0.04801197426499404 0.6210199180083003 80.59870900674125 0.007988534332093107 0.009008445829946145 1.908369482417286e-09 8.719337537053242 0.02033482500397643 DPEDS(ph)DVFEEDTHL ddPTM_A549_PD325901_60min_R1 1 DPEDSDVFEEDTHL 14 0 Q9NZ53-2;Q9NZ53 Q9NZ53-2 PODXL2 Podocalyxin-like protein 2 1 DPEDS(0.999)DVFEEDT(0.001)HL 44.61600000000001 0.055662 1644300.0 0.0 0.0 0.0 0.0 148.28 0.0 0.0 116.29 142.66 0.0 0.0 True False 0.0 0.0 0.0 0.0 137.86532433822967 0.0 0.0 113.97050472225986 136.66449631351355 0.0 0.0 0.0 DPET(ph)PR ddPTM_A549_MK2206_60min_R1 1 DPETPR 6 0 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 DPET(1)PR 75.854 0.04827 14727000.0 569.78 624.99 568.44 450.24 378.15 405.72 381.25 347.78 531.72 875.77 985.59 True False 665.9449342164535 656.7993214518734 649.0533395682202 560.5488202120418 322.524635932276 448.6530211048604 450.5181900200659 397.0788800315813 411.2862689823609 677.9329487513195 740.840802099804 0.8989042346600387 0.8865593250132452 0.8761036618509324 0.756638698386008 0.4353494502707295 0.6055997723575963 0.6081174103034532 0.5359840857929528 0.5551614703410377 0.9150858684211487 1.0 9.533019747560251 -6.303190884291534 4.515128988794634 0.7136023946665997 0.8885843661645513 0.23683746513860027 0.1596635170405803 0.3560621903771758 16.7757804458658 0.029774329537960356 0.07370807079047043 4.975183640002778e-07 6.303190884291534 0.17498197149795158 DPFRDS(ph)PLSSR ddPTM_A549_MK2206_60min_R1 2 DPFRDSPLSSR 11 1 Q9UJY1 Q9UJY1 HSPB8 Heat shock protein beta-8 1 DPFRDS(0.999)PLS(0.001)SR;DPFRDS(1)PLSSR 109.07 3.0291e-05 12078100.0 1519.87 1595.3400000000001 1778.75 1466.4 2469.3 1715.71 1855.3600000000001 1574.35 2421.1 2450.5 2732.7 True False 1776.3868987461158 1676.5359917519181 2031.003496863295 1825.6680658291968 2106.06924106193 1897.2652934038763 2192.4548958311602 1797.5189337446666 1872.7247157022396 1896.930348053836 2054.095171316808 0.8648026262616336 0.8161919735574619 0.9887582256285089 0.8887942931382413 1.0253026590349283 0.9236501404107808 1.0673579912198785 0.875090384732437 0.9117029930515351 0.923487078175536 1.0 11.004287311501226 -5.759621534429972 24.99999978762161 0.9582951756106343 0.8404972720016713 0.3733723405106938 0.05765857624534314 34.023104496312406 467864.1856451783 0.007673834201814726 0.026970643204189158 1.7393158939114354e-06 5.759621534429972 -0.11779790360896292 DPFRDS(ph)PLSSR ddPTM_A549_PD325901_60min_R1 2 DPFRDSPLSSR 11 1 Q9UJY1 Q9UJY1 HSPB8 Heat shock protein beta-8 1 DPFRDS(0.995)PLS(0.003)S(0.003)R;DPFRDS(0.998)PLS(0.002)SR 125.47 8.5553e-07 13731000.0 1098.2 1473.7 1511.8 1292.6 1218.2 1110.1 1387.9 1458.1 1691.0 1593.3 1733.9 True False 1209.6884555478894 1597.893870950599 1614.3998391919197 1372.4409662924063 1132.6378345618514 1101.0597136524814 1440.717293988022 1429.0170516426783 1619.9331506109036 1492.698766085722 1520.6412920976989 0.7955120394495829 1.0508026312677143 1.0616572413109224 0.9025409039097888 0.7448422191662287 0.7240759009862137 0.947440597249978 0.9397463156293576 1.0652960425507276 0.9816245118706262 1.0 10.57046415689288 -8.493953592048605 2.639046226516451 1.0304945573141318 0.8909293980479507 0.20963238714410837 0.10508872978324575 0.30678383911378554 4.263929720655068 0.019602050031011856 0.023229009886725018 3.206611959163551e-09 8.493953592048605 -0.13956515926618107 DPFS(ph)PDK ddPTM_A549_MK2206_60min_R1 1 DPFSPDK 7 0 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 DPFS(1)PDK 47.603 0.059078 1330600.0 1358.2 1305.8 1314.2 1005.4 1552.2 1099.3 1181.9 1157.1 1435.3 1530.3 1707.9 True False 1587.4309551981246 1372.2596424772494 1500.5733214772972 1251.7230451341213 1323.8734361869065 1215.6271963437182 1396.6359312386 1321.1224684701328 1110.2068417031196 1184.6041671604921 1283.781294357952 1.236527562891493 1.0689201100749388 1.1688699064802683 0.9750282627074235 1.0312297289305852 0.9469114417589959 1.08790799287747 1.029086865711699 0.8647943746978796 0.9227460879564688 1.0 10.326183729785685 -4.506942938565243 0.3833820571143972 0.9442955584009353 1.6122054235526964 0.5841509018549789 0.06634449088591603 5.172571064953257 0.33342170270896754 0.018697541809076523 1.7956428299367893 3.112125208669658e-05 4.506942938565243 0.6679098651517611 DPFS(ph)PDK ddPTM_A549_PD325901_60min_R1 1 DPFSPDK 7 0 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 DPFS(1)PDK 57.598 0.034783999999999995 2853700.0 1051.7 1158.1 1302.7 1017.9 1315.1 1016.1 1042.2 1232.6 1104.5 1246.2 1445.4 True False 1158.467809779381 1255.6971513523033 1391.1090557714738 1080.7733711813705 1222.7319128487045 1007.8252184868818 1081.8614913137226 1208.0148260440055 1058.0817060022134 1167.5147193221774 1267.6249631455173 0.9138884476562603 0.9905904252913922 1.0974137431938384 0.852597102931384 0.9645849114667054 0.7950499933245542 0.8534554957241955 0.9529749422466456 0.8346961733671308 0.9210253452449186 1.0 10.30791226054854 -6.278863893551867 24.961895734615762 0.9079747119595062 0.9996268446765044 0.29041738685763707 0.07072641670037606 940.5749262328965 1347441.3522210708 0.011478060976007601 0.026726082380428937 5.261821442895872e-07 6.278863893551867 0.09165213271699824 DPGLEPGPDS(ph)PGGSSPPR ddPTM_A549_MK2206_60min_R1 1 DPGLEPGPDSPGGSSPPR 18 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 DPGLEPGPDS(0.996)PGGS(0.003)S(0.002)PPR 81.594 0.00022813 1829000.0 363.85 412.4 568.52 418.22 605.2 556.92 501.34 464.01 553.89 831.26 985.22 True False 425.2589847215709 433.3893984971801 649.144684771171 520.6839187746094 516.1758817035919 615.8529047464237 592.4269885499275 529.7848384710277 428.4347993805763 643.4777886648568 740.5626833112841 0.5742376632051008 0.5852163608343894 0.8765560288139891 0.7030922979354983 0.6970049846362909 0.8316013196786469 0.7999687290493814 0.7153814935721529 0.5785260438250982 0.8689038796657552 1.0 9.532478044228727 -10.95661731542469 1.2007476785972153 1.0011768991325443 0.7018675191597616 0.4046046642084693 0.10285003532212211 0.30364246422970226 0.7732963363822773 0.07522584825750876 0.017205124311779823 1.1050519227691967e-11 10.95661731542469 -0.2993093799727826 DPGLEPGPDSPGGS(ph)SPPR ddPTM_A549_PD325901_60min_R1 1 DPGLEPGPDSPGGSSPPR 18 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 DPGLEPGPDS(0.114)PGGS(0.443)S(0.443)PPR 45.438 0.036718 4001100.0 1108.3 803.16 750.0 928.08 916.29 788.74 879.41 653.18 516.81 840.4 887.06 True False 1220.813800112662 870.8451118902649 800.8995101163778 985.4053937773913 851.9329514288947 782.3167629459136 912.876428781617 640.1518124902024 495.0902729551866 787.3370005764391 777.9572435366424 1.5692556503012502 1.119399708821205 1.0294903952245993 1.266657521302426 1.0950896832786776 1.005603803352293 1.1734275069303597 0.8228624616695284 0.6363977931543836 1.0120569055918236 1.0 9.603547056769342 -8.262347761538747 22.569007201300508 0.8230936714672842 1.1651159435013523 0.4219821462964952 0.17225749872796145 15.130512160200775 375925.326358857 0.030306493169847567 0.037733945812847794 5.465781148959166e-09 8.262347761538747 0.3420222720340681 DPGMS(ph)QSHNDLVFLEQPEGSR ddPTM_A549_MK2206_60min_R1 1 DPGMSQSHNDLVFLEQPEGSR 21 0 Q9Y426-2;Q9Y426-3;Q9Y426;H7BZB0 Q9Y426-2 C2CD2 C2 domain-containing protein 2 1 DPGMS(0.533)QS(0.467)HNDLVFLEQPEGSR 53.55 0.0021726999999999996 4235700.0 474.43 747.55 730.18 641.66 1209.7 624.83 716.05 852.4 1103.8 620.89 1038.2 True False 554.5021853001367 785.5971019557883 833.7305036343728 798.8667288052122 1031.7547324799007 690.949095871414 846.1470162986706 973.2303103655182 853.791062406399 480.6305177731674 780.3862871376696 0.7105483456583545 1.0066772249897307 1.0683561684462206 1.0236811460838529 1.3221077170182087 0.8853936918929 1.084266894799242 1.247113546722059 1.0940621029336206 0.6158879592003625 1.0 9.608044617065211 -5.233943861706268 2.526697865706116 1.069180121619563 0.6177580563669541 0.20347961813930837 0.17649640283670576 0.3810279913750185 2.853670788765734 0.014988107275748421 0.3773675600173785 5.8352052712854635e-06 5.233943861706268 -0.451422065252609 DPGMSQS(ph)HNDLVFLEQPEGSR ddPTM_A549_MK2206_60min_R1 1 DPGMSQSHNDLVFLEQPEGSR 21 0 Q9Y426-2;Q9Y426-3;Q9Y426;H7BZB0 Q9Y426-2 C2CD2 C2 domain-containing protein 2 1 DPGMS(0.212)QS(0.788)HNDLVFLEQPEGSR 52.391000000000005 0.0024758000000000002 3067600.0 723.01 484.74 592.53 504.17 986.71 502.92 848.78 843.77 1153.7 1318.7 1241.3 True False 845.0364121026327 509.411195508058 676.5596638068354 627.6916726330511 841.5662660868335 556.1386605887224 1002.9923392137224 963.3769814372516 892.3887920803246 1020.8047541230749 933.0509518628296 0.9056701677604245 0.5459628914059004 0.7251047356589571 0.6727303277274077 0.9019510289407587 0.5960431844353146 1.0749598799628846 1.0325020080777758 0.9564202151004473 1.0940503860856103 1.0 9.86581205540989 -7.7668517514523865 24.999890727126676 0.9902375408084921 0.7221879953668127 0.6456279715378875 0.11134840072562606 62.941446382147966 290728.41761974886 0.015201659222412966 0.021333468645099413 1.71059913682951e-08 7.7668517514523865 -0.26804954544167947 DPGMSQS(ph)HNDLVFLEQPEGSR ddPTM_A549_PD325901_60min_R1 1 DPGMSQSHNDLVFLEQPEGSR 21 0 Q9Y426-2;Q9Y426-3;Q9Y426;H7BZB0 Q9Y426-2 C2CD2 C2 domain-containing protein 2 1 DPGMS(0.264)QS(0.736)HNDLVFLEQPEGSR 65.881 0.00031929 4582800.0 2811.5 3504.3 2894.8 2791.6 3679.5 3070.3 2790.1 3405.7 2926.3 3521.0 4107.7 True False 3096.921410283092 3799.6196593419213 3091.2585358465194 2964.0307918164017 3421.0646135858947 3045.296494754719 2896.2787823013045 3337.7706417800337 2803.3177874823677 3298.6834591023826 3602.47894085571 0.8596639872508093 1.0547236282911854 0.8580920490023022 0.8227753279002776 0.9496418076973621 0.8453336007652993 0.8039682756933316 0.9265205145063807 0.7781635461320658 0.9156704350695897 1.0 11.814774281471038 -4.949567375323246 17.26166806079118 0.8925882710038546 0.6153042986914489 0.014811969780922807 0.08090836824353285 5105.626780128174 64228.38436983319 0.012708117804205311 51411.19454787758 1.1231367156313227e-05 4.949567375323246 -0.27728397231240576 DPGPPRPPAGATQDEELQGS(ph)PLSR ddPTM_A549_MK2206_60min_R1 1 DPGPPRPPAGATQDEELQGSPLSR 24 1 Q58EX7-2;Q58EX7;H3BPQ5;H3BME5;H3BQE6;H3BQP9;Q58EX7-3 Q58EX7-2 PLEKHG4 Puratrophin-1 1 DPGPPRPPAGATQDEELQGS(0.986)PLS(0.014)R 95.459 3.7165e-08 13603000.0 2098.3 2521.6 2434.0 1958.2 3388.9 2724.3 2667.2 2691.1 3744.8 3826.0 3559.3 True False 2452.441741490374 2649.9386693755805 2779.1777997837044 2437.959087906938 2890.397299248685 3012.5836177560195 3151.795715203987 3072.5716661481047 2896.608779216779 2961.7039427275963 2675.427578317386 0.916654130863355 0.9904729587343807 1.0387789310042053 0.9112409200178031 1.0803496692167973 1.1260194976575204 1.1780530860738887 1.1484413523465613 1.0826713467005886 1.107002098180603 1.0 11.38555376153017 -6.780372826458283 24.982720719407297 1.0680613353620807 0.9714780444469571 0.5019803460292125 0.060268992241029724 233.75874556379026 308444.8114933998 0.01052118640008467 0.019906301098817036 1.6581628221029414e-07 6.780372826458283 -0.09658329091512363 DPGPPRPPAGATQDEELQGS(ph)PLSR ddPTM_A549_PD325901_60min_R1 2 DPGPPRPPAGATQDEELQGSPLSR 24 1 Q58EX7-2;Q58EX7;H3BPQ5;H3BME5;H3BQE6;H3BQP9;Q58EX7-3 Q58EX7-2 PLEKHG4 Puratrophin-1 1 DPGPPRPPAGATQDEELQGS(0.921)PLS(0.079)R;DPGPPRPPAGATQDEELQGS(0.946)PLS(0.053)R 68.733 5.1723e-05 31676000.0 11584.9 12772.7 11846.4 12860.4 14631.0 11654.1 11847.9 12206.599999999999 13870.7 14121.5 14599.7 True False 12760.990519647381 13849.100254794548 12650.367942190214 13654.757699912474 13603.369034209865 11559.192873504539 12298.778317919645 11963.129787107548 13287.762715658577 13229.866080009731 12804.029455123564 0.9966386413256054 1.0816204620064191 0.9879989722398005 1.0664422280322456 1.0624287519712354 0.9027777477408957 0.9605396770622281 0.93432538788174 1.0377797678637366 1.0332580166562932 1.0 13.644310280407797 -5.794504896246959 24.99246242622246 1.0058348000512836 1.0391298356511827 0.06797701673262135 0.05256837576847884 400.80012700332935 302943.17718686536 0.007391527867902607 0.022983585328916693 1.6050741623482347e-06 5.794504896246959 0.0332950355998991 DPGVLDR ddPTM_A549_MK2206_60min_R1 1 DPGVLDR 7 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 73.324 0.052894000000000004 11525000.0 3020.3 2890.8 2572.8 2535.0 3420.4 2965.8 2563.5 2534.3 3593.4 3413.6 3355.1 False True 3530.052800754598 3037.9293723948795 2937.6617269036615 3156.075113800475 2917.2636909764815 3279.6389874612937 3029.2547675185315 2893.544785968246 2779.5006374806603 2642.4653891518374 2521.936073950679 1.3997392071975392 1.2046020530710293 1.1648438504239076 1.2514492918356968 1.1567556057860384 1.300444932501264 1.2011623921827346 1.1473505676277638 1.1021296955899835 1.0477923752493639 1.0 11.30031599134995 -8.952762536784054 0.3289893399673826 0.9757627012095574 1.27821330738324 0.6404593515352512 0.06435963499352639 0.5251432742779827 0.16594469933206754 0.05628737715971748 0.04339622224201283 1.1149039733328582e-09 8.952762536784054 0.3024506061736826 DPGVLDR ddPTM_A549_PD325901_60min_R1 1 DPGVLDR 7 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 72.875 0.053828999999999995 13333000.0 4597.8 4825.4 5112.2 4099.0 6051.4 4603.6 4441.9 4977.4 4555.7 5218.8 5066.1 False True 5064.565271278538 5232.053392742774 5459.144634155927 4352.18592049557 5626.370540196675 4566.109807918716 4610.938935200943 4878.121852305238 4364.239771873503 4889.284077354018 4443.001816653873 1.1398971866936527 1.1775942501601662 1.22870637002515 0.9795597886505708 1.2663444158647732 1.0277082919037739 1.0377981206124167 1.097933796475254 0.9822727858257578 1.1004461125870642 1.0 12.117319015899042 -7.68955488954263 0.6650426420732415 0.9903547667565953 1.167262171684495 0.23532802150471255 0.08294432516717554 0.43499273832426816 0.38825246668442653 0.015248375688853616 0.031177831573340375 2.0438316042105888e-08 7.68955488954263 0.1769074049278998 DPHLLDPTVEY(ph)VK ddPTM_A549_MK2206_60min_R1 2 DPHLLDPTVEYVK 13 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 DPHLLDPT(0.001)VEY(0.999)VK;DPHLLDPT(0.002)VEY(0.998)VK 89.62899999999999 7.763899999999999e-05 12078200.0 1630.69 1957.66 1420.52 1328.32 2002.13 1484.44 1603.75 1684.01 2084.49 2229.5 2273.02 True False 1905.9106054572442 2057.2965321580737 1621.9710961991566 1653.7584596305496 1707.6193292055743 1641.5224555084765 1895.130615723754 1922.7235745643302 1612.356343246524 1725.8544015450016 1708.566401839401 1.115502800128451 1.2041068640605588 0.9493169796930234 0.9679216785781072 0.9994456916437038 0.9607601166341873 1.1091934230261713 1.125343195613804 0.9436895993686288 1.0101184242456067 1.0 10.738570602515802 -5.761893735009608 24.99999995258502 0.9914169993703326 1.1598048602955646 0.461420765665457 0.06161681124010058 6.886185976102498 379017.6746812345 0.009011264185189225 0.030773850482329 1.7302396697038988e-06 5.761893735009608 0.16838786092523206 DPHLLDPTVEY(ph)VK ddPTM_A549_PD325901_60min_R1 2 DPHLLDPTVEYVK 13 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 DPHLLDPTVEY(1)VK;DPHLLDPTVEY(1)VK 112.51 1.3582e-05 12719400.0 1789.45 1472.4299999999998 1608.96 1607.48 1468.21 1807.7199999999998 1904.05 1828.28 1603.6799999999998 1627.42 1978.65 True False 1971.1136466765356 1596.5168435935336 1718.1537010624627 1706.7703887480393 1365.0879946495293 1792.9985276676562 1976.5096646861377 1791.813521142086 1536.282906547424 1524.6644234627654 1735.2885936957784 1.1358996156820822 0.9200295843547891 0.990125623659623 0.9835657278844888 0.7866633824534026 1.0332566779851693 1.139009195281237 1.032573790694908 0.8853183914933039 0.878622973147982 1.0 10.760959900243872 -8.742821027528498 24.993804907241984 0.9458447823385256 0.9972006926659874 0.10687229011232258 0.09701483378667945 612.9123987349395 822790.1190415885 0.016962149531263813 0.01921681621019764 1.807919014757984e-09 8.742821027528498 0.051355910327461785 DPLEEMVPLSHLEEEQPPAPES(ph)PESR ddPTM_A549_MK2206_60min_R1 1 DPLEEMVPLSHLEEEQPPAPESPESR 26 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 DPLEEMVPLSHLEEEQPPAPES(0.961)PES(0.039)R 73.126 5.6154e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DPLEEMVPLSHLEEEQPPAPES(ph)PESR ddPTM_A549_PD325901_60min_R1 1 DPLEEMVPLSHLEEEQPPAPESPESR 26 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 DPLEEMVPLSHLEEEQPPAPES(0.923)PES(0.077)R 124.82 3.4172000000000002e-18 2605900.0 1219.3 1169.8 1253.1 1268.7 1217.0 1333.7 1068.0 1133.9 1297.7 1313.2 1247.4 True False 1343.0824383987815 1268.3831514134565 1338.1429015024435 1347.0647175732445 1131.5221184220773 1322.8387893868257 1108.643324432025 1111.2834749726583 1243.1621818733108 1230.2843278878854 1093.9777079201046 1.227705490409197 1.1594232151447907 1.2231902824112855 1.2313456735186266 1.0343191732611745 1.2092008637925877 1.0134057727189003 1.0158191222062978 1.1363688426858707 1.1245972554842365 1.0 10.09536762516844 -2.000000008345296 0.0881687374631409 0.9299556499581345 1.7384636330161438 0.34609636195843596 0.07237860432912753 92.1642958015068 0.5685166901141414 0.6856550772583507 9.041415029999383 0.00999999980784246 2.000000008345296 0.8085079830580093 DPLKT(ph)PGR ddPTM_A549_MK2206_60min_R1 1 DPLKTPGR 8 1 Q9NRG9;Q9NRG9-2 Q9NRG9 AAAS Aladin 1 DPLKT(1)PGR 49.5 0.013168000000000001 13834000.0 2603.4 1952.4 2173.2 2418.3 3141.9 2785.2 2191.6 2689.3 3702.6 3564.4 3009.9 True False 3042.790272981003 2051.7688206253506 2481.3924381634947 3010.7836085616123 2679.7306720497627 3079.92801533387 2589.785351470102 3070.5165106358377 2863.9670118372273 2759.1995644166873 2262.4587609860064 1.3449041924878748 0.9068756770316403 1.0967680299649194 1.3307573426220052 1.184432935644716 1.3613189634411726 1.1446773731873205 1.3571591065366735 1.2658648463449016 1.2195579481918137 1.0 11.143675780343807 -10.775548162634326 1.0540862180802146 1.0015194468635105 1.218286279710403 0.002977478202703998 0.14544948352374584 0.5508076988570547 1.0986715783169425 0.08664998960921062 0.02254287275853858 1.6766863833259362e-11 10.775548162634326 0.21676683284689258 DPLKT(ph)PGR ddPTM_A549_PD325901_60min_R1 1 DPLKTPGR 8 1 Q9NRG9;Q9NRG9-2 Q9NRG9 AAAS Aladin 1 DPLKT(1)PGR 64.73 0.0036763000000000004 23509000.0 4275.9 4858.4 4920.0 4379.5 5731.1 3710.0 4720.0 4845.3 4527.3 4871.2 5420.2 True False 4709.986220248787 5267.834418556281 5253.900786363437 4650.011768433849 5328.567307221661 3679.7869900465807 4899.622182883107 4748.656690435681 4337.03332510984 4563.631600675805 4753.549761478714 0.9908355769023494 1.1081896020622672 1.1052583963545333 0.9782188052634047 1.1209659253812194 0.7741134888008174 1.0307291242826822 0.9989706490331323 0.9123778108427111 0.9600470868440368 1.0 12.214789547714688 DPLQNS(ph)PGSEGK ddPTM_A549_MK2206_60min_R1 2 DPLQNSPGSEGK 12 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 DPLQNS(1)PGSEGK;DPLQNS(1)PGSEGK 151.99 1.8612e-12 32814000.0 6914.0 8631.900000000001 7247.0 6706.0 8451.2 6979.0 6227.9 6666.1 9203.9 10488.1 10306.400000000001 True False 8080.914168929346 9071.22684017413 8274.733572322306 8348.970301043775 7208.0396752369425 7717.513147714731 7359.42881475664 7611.040089075061 7119.231345608123 8118.8309256981975 7747.036437830558 1.0430974778262803 1.1709286399993224 1.0681160000635703 1.0776985971401705 0.9304254256554713 0.9961890859359254 0.9499669807694281 0.9824453712271966 0.9189619027533267 1.0479918341486147 1.0 12.919428810000964 -6.68280117707964 5.503515833452811 0.9625024336918747 1.0967038425905893 0.5884504680159243 0.045423727033245334 0.08550294349655807 4.42577428603661 0.0057593938388435795 0.012081899345398836 2.0758636442202976e-07 6.68280117707964 0.13420140889871457 DPLQNS(ph)PGSEGK ddPTM_A549_PD325901_60min_R1 2 DPLQNSPGSEGK 12 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 DPLQNS(0.971)PGS(0.029)EGK;DPLQNS(0.998)PGS(0.002)EGK 165.87 1.3838e-14 41790000.0 22472.0 21426.1 20653.5 22494.6 25915.0 22168.0 22414.0 23102.0 24787.0 25182.0 28692.0 True False 24753.340896987942 23231.75264190448 22055.17070958481 23884.04035305676 24094.819801896578 21987.471157776963 23266.97703541141 22641.212486831602 23745.2885891144 23592.004222413 25163.065893573534 0.9837172068650731 0.9232480946543841 0.8764898046552245 0.9491705205587277 0.9575470613877072 0.8737993712996796 0.9246479397152328 0.8997795651210374 0.9436564164933008 0.9375647753812952 1.0 14.619020091909059 -9.930292314522829 0.7975436259985554 0.9951912261246807 0.922839262905888 0.1084846616786983 0.03603545145841727 0.3843875844575471 0.5001868756866287 0.013555694044580863 0.006517302025600448 1.1741070220698521e-10 9.930292314522829 -0.07235196321879267 DPPHRPHPHELVGK ddPTM_A549_MK2206_60min_R1 1 DPPHRPHPHELVGK 14 1 Q04206;Q04206-4;Q04206-3;Q04206-2;A0A087X0W8;E9PKH5;Q2TAM5;E9PQS6;A0A087WVP0;E9PKV4;E9PMD5;E9PI38;E9PNV4;E9PRX2;E9PJR1 Q04206 RELA Transcription factor p65 0 49.928999999999995 0.060998000000000004 5065900.0 614.17 574.12 406.41 462.38 494.34 428.55 532.98 521.48 623.32 590.95 750.46 False True 717.8268809851508 603.3402557352113 464.04504914137004 575.6631207570272 421.6232408482381 473.8988765515329 629.8155669951343 595.4013869655212 482.1390152375034 457.4539845674004 564.1000703576725 1.2725169144722965 1.0695624543224365 0.8226289510071118 1.0204982254159674 0.7474263220369822 0.8400971768201575 1.1164961681281025 1.055488942924616 0.8547047599760074 0.8109447394277894 1.0 9.139807306658396 -5.422899437459181 3.271414856488327 0.9328626376102165 1.273274051723335 0.46565040271018043 0.1123942236001336 0.18195839198754954 3.2485985683961416 0.014993917441779997 0.12212933580318552 3.7765962932675116e-06 5.422899437459181 0.3404114141131185 DPPHRPHPHELVGK ddPTM_A549_PD325901_60min_R1 1 DPPHRPHPHELVGK 14 1 Q04206;Q04206-4;Q04206-3;Q04206-2;A0A087X0W8;E9PKH5;Q2TAM5;E9PQS6;A0A087WVP0;E9PKV4;E9PMD5;E9PI38;E9PNV4;E9PRX2;E9PJR1 Q04206 RELA Transcription factor p65 0 53.001000000000005 0.047302 3294100.0 724.73 824.66 742.83 605.71 875.53 710.12 711.79 611.97 844.91 980.09 938.94 False True 798.3040560819725 894.1569923445217 793.2429107996655 643.1233310327816 814.0357932145276 704.3370181595361 738.8775579564332 599.7637782688221 809.4013709536715 918.2069501367946 823.4563324310585 0.9694552396302182 1.0858584203302393 0.9633090178052368 0.7810047791291048 0.9885597586107341 0.8553422815756957 0.8972880878516938 0.7283492210183903 0.9829317464401627 1.1150645322333093 1.0 9.685548336198078 -8.964449854147867 24.998982379271975 0.9924701225818774 0.909067008832054 0.20552320903290544 0.10060420448697098 251.9852910222894 177198.008717245 0.016563567698835522 0.01756911708375672 1.0853008567611775e-09 8.964449854147867 -0.08340311374982334 DPQT(ph)PVLQTK ddPTM_A549_MK2206_60min_R1 2 DPQTPVLQTK 10 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 DPQT(1)PVLQTK;DPQT(0.999)PVLQT(0.001)K 124.45 2.2661e-05 36808000.0 14903.4 16389.0 14776.400000000001 14377.1 20414.0 15379.7 14872.099999999999 15466.5 23579.0 22097.0 25538.0 True False 17418.729566852995 17223.13009692117 16871.91571106159 17899.490145412547 17411.127642262283 17007.169645781392 17574.16806241947 17658.923739169742 18238.39414792577 17105.27235296699 19196.20978705627 0.9074046262298194 0.897215142362868 0.8789191146701304 0.9324491836655129 0.9070086144819255 0.8859649813396541 0.9155019796808785 0.9199172094418818 0.9501039189634019 0.8910755061918958 1.0 14.228533864391121 -9.278197527607775 0.546631799100021 0.9973691423962361 0.8984865718576239 0.0 0.034141870750536846 0.17786455939949292 0.12211452560903033 0.006622555063160628 0.004315486175958491 5.269901190867974e-10 9.278197527607775 -0.09888257053861216 DPQT(ph)PVLQTK ddPTM_A549_PD325901_60min_R1 2 DPQTPVLQTK 10 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 DPQT(0.988)PVLQT(0.012)K;DPQT(0.999)PVLQT(0.001)K 121.86 4.3017e-05 54274000.0 24837.8 25393.2 25948.0 26581.0 29449.0 26137.0 26182.0 26884.0 28361.0 27028.0 29570.0 True False 27359.31517137806 27533.174081443158 27708.9873179997 28222.848000169 27380.603833534704 25924.148937694747 27178.370337340133 26347.777529909992 27169.08579803418 25321.447467372665 25933.077459674103 1.0549968554222597 1.0617009926514585 1.0684804902575538 1.088295365023896 1.0558177630908443 0.9996557091230981 1.048019479354213 1.015991163057325 1.047661460167312 0.9764150632236949 1.0 14.662505799483961 -7.068627313040035 6.456306898995509 1.0232601983087364 1.06842508081487 0.5689449454889992 0.021695732752534915 0.14234737631391414 10.918720190639464 0.0029848345556076454 0.005224907687324261 8.538325104883726e-08 7.068627313040035 0.04516488250613371 DPRNS(ph)PVPPTKK ddPTM_A549_MK2206_60min_R1 1 DPRNSPVPPTKK 12 2 K7EM05;Q8NC06-2 K7EM05 ACBD4 Acyl-CoA-binding domain-containing protein 4 1 DPRNS(0.999)PVPPT(0.001)KK 44.196000000000005 0.012991999999999998 4485700.0 1359.0 1459.2 1485.1 1444.4 1483.7 1232.0 1043.7 1355.9 2183.4 2192.6 2434.3 True False 1588.3659756400016 1533.4670472528744 1695.7095112813377 1798.278064841581 1265.4496954455049 1362.3694222645875 1233.3267801283757 1548.102977269598 1688.8633861733376 1697.2901371731652 1829.7961267378453 0.8680562563391887 0.8380534994282312 0.9267204616420537 0.982775096396966 0.6915796120421047 0.7445471123022953 0.674024150617887 0.8460521664943903 0.9229789928478196 0.9275842878731462 1.0 10.837467199111693 -8.94477634774247 2.075170090328925 0.9710719058199041 0.8187001630387338 0.2963473514932753 0.08926081117607136 0.25921228645937033 2.2161272825991793 0.0186299826629179 0.01893017347486499 1.1355954722039797e-09 8.94477634774247 -0.15237174278117027 DPRNS(ph)PVPPTKK ddPTM_A549_PD325901_60min_R1 2 DPRNSPVPPTKK 12 2 K7EM05;Q8NC06-2 K7EM05 ACBD4 Acyl-CoA-binding domain-containing protein 4 1 DPRNS(0.999)PVPPT(0.001)KK;DPRNS(0.998)PVPPT(0.002)KK 57.148 0.0030510000000000003 11904000.0 3402.9 3205.8999999999996 3506.8 3497.8 3999.8 4265.0 4160.1 4515.0 4213.6 4723.0 5006.6 True False 3748.3599029174247 3476.0724441070265 3744.7925361014854 3713.8511619198325 3718.867846560904 4230.2672540562435 4318.414881994068 4424.944783051023 4036.5170451887043 4424.788973967779 4390.8199394522935 0.8536810788430991 0.7916681831732385 0.8528686185588852 0.8458217857102778 0.8469643250788352 0.9634344638108578 0.9835099005523654 1.007771861308206 0.919308261520789 1.0077363761174236 1.0 12.100274657708734 -7.245131708846283 4.492475284057163 0.9670121459303457 0.8355958565038062 0.8488833711189513 0.02958904610294958 0.07319730732558809 3.8433144752197417 0.005162468851764525 0.00883792242948591 5.686804405025605e-08 7.245131708846283 -0.1314162894265395 DPS(ph)ASPGDAGEQAIR ddPTM_A549_PD325901_60min_R1 1 DPSASPGDAGEQAIR 15 0 P18206;P18206-2 P18206 VCL Vinculin 1 DPS(0.5)AS(0.5)PGDAGEQAIR 190.82 9.5915e-34 85888000.0 2147.2 2631.6 2251.8 1590.0 2343.2 2026.8 2007.9 1866.3 2261.5 2383.9 2419.8 True False 2365.182163314905 2853.374167601003 2404.6206891734123 1688.2106888480012 2178.621715601159 2010.294412783399 2084.3117332650404 1829.0751824159743 2166.457019578093 2233.380147161082 2122.179940376037 1.1145059466049847 1.3445486470366896 1.133089915432585 0.7955077968312436 1.026596130776319 0.9472780203676732 0.982155986685895 0.8618850586684339 1.020863960854427 1.0523990471634281 1.0 11.051331272715945 -6.007463237810448 24.697666194186592 0.9821091891147431 1.2318503432099686 0.5925852868958663 0.08826587641038583 140.60769303137332 465312.1205893368 0.01104080863006245 0.032397358014913835 9.829620753207374e-07 6.007463237810448 0.24974115409522546 DPS(ph)KIK ddPTM_A549_MK2206_60min_R1 2 DPSKIK 6 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 DPS(1)KIK;DPS(1)KIK 60.91 0.052509 71346000.0 7910.4 6808.4 6123.6 4706.299999999999 8356.6 7134.5 5528.5 7951.400000000001 8329.3 9474.8 9605.1 True False 9245.48212928821 7154.918478972356 6992.018559883105 5859.343711273832 7127.355209921082 7889.468054502187 6532.956887936884 9078.53530014123 6442.72684915892 7334.436099465612 7219.888582725903 1.2805574522865468 0.9910012318044641 0.9684385679596229 0.8115559740482324 0.987183545598444 1.092740970183155 0.904855637740373 1.2574342659334483 0.8923582095953119 1.0158655518609763 1.0 12.817760858285741 -5.260183738003246 4.355690244838067 0.9699230576312351 1.303449037289724 0.3427376296776732 0.11135330020813376 0.15964455133217664 7.190009669152204 0.014651011645795839 0.16411587881008 5.49308427462501e-06 5.260183738003246 0.33352597965848896 DPS(ph)PESNK ddPTM_A549_MK2206_60min_R1 1 DPSPESNK 8 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 DPS(0.997)PES(0.003)NK 44.425 0.059604 25447000.0 6642.1 6292.1 4172.0 4089.8 3710.8 2742.4 2315.3 2577.9 3037.0 7486.3 7927.2 True False 7763.124096246111 6612.341014267962 4763.652333893841 5091.801183598098 3164.946235667036 3032.598947742212 2735.9600402713686 2943.325219487645 2349.124349092436 5795.139630538843 5958.657460410075 1.302831073580768 1.1097031601834855 0.7994506087225236 0.8545215457388752 0.5311508937533765 0.5089399697651874 0.45915712699536176 0.49395778143707647 0.39423718592657103 0.972557940952696 1.0 12.540771599680065 -5.664134769520227 1.228921403444832 0.6496569358682052 1.3950139605057632 0.5566076831424106 0.1946840740661081 0.5839737773574243 1.158469899765076 0.03661304406858804 0.45718779845403834 2.167031530953806e-06 5.664134769520227 0.745357024637558 DPS(ph)PESNK ddPTM_A549_PD325901_60min_R1 1 DPSPESNK 8 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 DPS(0.973)PES(0.027)NK 47.228 0.037994 45780000.0 5031.2 3957.2 3941.9 4354.8 4447.4 3217.2 3682.1 3168.3 3614.9 4025.0 5063.7 True False 5541.9637202263175 4290.687131794606 4209.421038570335 4623.786105531615 4135.02996669708 3191.0001898592604 3822.2243304224303 3105.1057710167324 3462.9783241533714 3770.860813089201 4440.897001439016 1.2479379094877712 0.9661757816955141 0.9478763045408003 1.0411829195843398 0.9311249428566294 0.7185485699905352 0.8606874532743919 0.6992068877099744 0.7797925335875246 0.849121430167667 1.0 12.116635395657196 -2.000000497689379 0.6616818750483392 0.8705403512441411 35.84355236236326 0.5728329212842789 0.09826172109612585 151.44560242877353 0.8634242502591754 0.0194868271003885 7794.558857956046 0.009999988540285115 2.000000497689379 34.973012011119124 DPS(ph)PESNKKGESPSLESR ddPTM_A549_MK2206_60min_R1 3 DPSPESNKKGESPSLESR 18 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 DPS(0.959)PES(0.041)NKKGESPSLESR;DPS(0.913)PES(0.087)NKKGESPSLESR;DPS(0.859)PES(0.141)NKKGESPSLESR 103.67 2.057e-09 87868000.0 15005.599999999999 14650.7 13517.1 13062.6 19683.1 12735.300000000001 13144.3 12500.0 23166.9 22935.5 22098.1 True False 17538.178428302872 15396.358051800767 15434.028035109412 16262.937586402395 16787.74206404491 14082.940992992046 15532.44916742494 14271.913279644508 17919.6341399373 17754.35462060346 16610.531893466516 1.0558468892378594 0.9269033737478736 0.9291712110182418 0.9790738605305684 1.0106685428085598 0.847832031106201 0.935096435625543 0.8592086858614163 1.078811578994993 1.0688612944168783 1.0 14.019810650789552 -8.777534164679802 24.99997846648343 1.0372165790270784 0.9420049402587146 0.38082869509028505 0.0597948498317961 198.2616978027087 307958.1386920068 0.010554086432410978 0.01125229187708614 1.6690365038142938e-09 8.777534164679802 -0.0952116387683638 DPS(ph)PESNKKGESPSLESR ddPTM_A549_PD325901_60min_R1 1 DPSPESNKKGESPSLESR 18 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 DPS(0.851)PES(0.149)NKKGESPSLESR 93.76700000000001 1.2629e-06 15614000.0 5503.6 5910.0 5965.0 6281.5 7632.8 7337.6 7033.5 7121.3 7347.7 6983.2 7953.1 True False 6062.321420463821 6408.056441146806 6369.820770458929 6669.493988678435 7096.698459730504 7277.845018373528 7301.163691378884 6979.260084948228 7038.90172131504 6542.279560239636 6974.919118854719 0.8691601031008447 0.9187284227890814 0.9132465426358739 0.9562109430988736 1.0174596061689931 1.0434307401070693 1.0467739578000632 1.0006223679471455 1.0091732393408495 0.9379721038706292 1.0 12.767960772212694 -6.4363322844705255 2.0602629209775327 1.011213776718893 0.8978892953582762 0.7218609575991126 0.029311618303109587 0.09196197755042129 0.7596106372979665 0.0030819700696438994 0.008664459203410406 3.6615731562602595e-07 6.4363322844705255 -0.11332448136061668 DPS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 DPSPPR 6 0 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 1 DPS(1)PPR 64.734 0.058234 26106000.0 1911.8 2047.3 2207.7 1784.1 2258.7 1659.3 1785.7 2189.3 2469.1 2423.3 2313.4 True False 2234.4651009775985 2151.498825274677 2520.785056936105 2221.2045800912924 1926.4482220817977 1834.8860246458023 2110.1385755248066 2499.639979450057 1909.8527923424888 1875.874846945056 1738.918933408096 1.2849737029421404 1.2372622920712977 1.449627701732843 1.2773479760427748 1.1078424560632991 1.0551877890302919 1.2134772558886109 1.4374678033731156 1.098298923342781 1.0787592284526692 1.0 10.763974961932105 -9.410663933005939 0.19091454129747043 0.8708230715467159 1.366902864261605 0.2969490047411869 0.1206727682952836 2.9254688565577704 0.3453059797433416 0.49125661848466273 0.27980766552782577 3.884508418559392e-10 9.410663933005939 0.4960797927148891 DPS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 DPSPPR 6 0 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 1 DPS(1)PPR 66.429 0.056027 33030000.0 5052.4 5302.2 5158.2 5067.0 5556.8 5255.6 5559.4 5325.3 5118.7 5668.3 5347.9 True False 5565.315928619701 5749.035002072521 5508.266470776401 5379.977082008061 5166.509537919304 5212.8001360886265 5770.966009220412 5219.082713882967 4903.5788397587385 5310.4025706418715 4690.14220313125 1.1865985481003463 1.2257698707374647 1.1744348534035816 1.1470818685233597 1.101567780710363 1.1114375450297513 1.2304458498865083 1.1127770732406757 1.0455074979357752 1.1322476676925746 1.0 12.195415949970352 -8.722871655980803 2.296813103970477 1.0185880114292043 1.165659424500454 0.40920771128966116 0.05186979092991436 0.11517411352486778 1.1975124412034963 0.007749375641033491 0.008493948630534978 1.8929029323971855e-09 8.722871655980803 0.1470714130712496 DPSAS(ph)PGDAGEQAIR ddPTM_A549_MK2206_60min_R1 2 DPSASPGDAGEQAIR 15 0 P18206;P18206-2 P18206 VCL Vinculin 1 DPS(0.012)AS(0.988)PGDAGEQAIR;DPS(0.038)AS(0.962)PGDAGEQAIR 191.52 7.6949e-34 123686000.0 5266.7 5648.1 5105.7 4376.700000000001 6429.4 5368.200000000001 4825.3 5636.799999999999 6776.200000000001 5968.0 6301.8 True False 6155.5902015476095 5935.564165014365 5829.765033835521 5448.991696477527 5483.643776974681 5936.259360877239 5701.994550305115 6435.833661976012 5241.401519367853 4619.824655043987 4736.88913916795 1.299500583758407 1.2530511039270313 1.2307159535634684 1.1503312694024035 1.1576466359814157 1.2531978660408256 1.2037424526482985 1.358662504629882 1.1065071116037397 0.97528663207336 1.0 12.209724192544199 -9.042897562340283 3.122407288322851 1.041596599098017 1.2324580168697608 0.6900226633418597 0.06305968305749178 0.10623931155688887 2.1423923037602757 0.012120920368944726 0.012086177996220419 9.059462625377124e-10 9.042897562340283 0.1908614177717438 DPSAS(ph)PGDAGEQAIR ddPTM_A549_PD325901_60min_R1 1 DPSASPGDAGEQAIR 15 0 P18206;P18206-2 P18206 VCL Vinculin 1 DPS(0.089)AS(0.911)PGDAGEQAIR 202.01 1.0362000000000001e-38 84421000.0 3107.5 2497.8 2594.3 2867.9 3628.4 2110.5 2317.6 2253.7 2407.9 3142.4 2999.8 True False 3422.97111237941 2708.2983720298625 2770.3647987932245 3045.043669526527 3373.553701300463 2093.312787734046 2405.797536239383 2208.7481855065525 2306.704336697808 2943.988327714661 2630.8436172989645 1.301092581053414 1.0294410333710444 1.0530328676994887 1.1574400125891229 1.2823087161539555 0.7956811928955356 0.9144585867514878 0.8395589045973896 0.8767926461041633 1.1190282494773276 1.0 11.361309778983994 -7.26248392644957 24.999992019949513 0.920528774758965 1.1505477515758593 0.5386942760303293 0.11039543661494086 53.86283347609713 1289147.492596806 0.014684607099766324 0.024301589759648055 5.4640677241438164e-08 7.26248392644957 0.23001897681689432 DPSASNGGGS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 DPSASNGGGSPAR 13 0 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 DPSAS(0.004)NGGGS(0.996)PAR;DPS(0.002)AS(0.009)NGGGS(0.989)PAR 71.513 0.0022065 98422000.0 976.6 1236.6599999999999 952.08 823.4300000000001 1304.66 896.96 822.9 862.1400000000001 1444.26 1568.52 1401.63 True False 1141.426204422388 1299.6007117980666 1087.0992603196662 1025.1703869651767 1112.746242272651 991.8757118461396 972.4102782098685 984.3509851930174 1117.1374160093003 1214.1902426155484 1053.5665879799387 1.0833925614620215 1.233524987053607 1.0318277674352045 0.9730475497811604 1.0561707774030502 0.941445679050925 0.9229699283405753 0.9343035328031499 1.0603386902684997 1.1524570506203906 1.0 10.041065783546845 -5.885395672343671 6.71019167006047 1.007456196873123 1.1571459411797955 0.4026480390696511 0.07112481869312824 0.12598792416227356 6.879116152215935 0.008216758983689409 0.02602124742386028 1.3019800439662693e-06 5.885395672343671 0.14968974430667248 DPSASNGGGS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 DPSASNGGGSPAR 13 0 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 DPSAS(0.002)NGGGS(0.998)PAR 79.46600000000001 0.00075969 95825000.0 616.19 714.11 656.01 716.13 549.85 681.88 526.71 903.82 741.3 751.89 512.31 True False 678.7451551848973 774.2905558692627 700.5307835085933 760.3637236507665 511.2304328795223 676.3269953565934 546.7542372767715 885.7926010669267 710.1457389401909 704.4155370816502 449.29911780066413 1.510675468287986 1.7233297934334786 1.559163496553738 1.6923329993897498 1.1378398323638255 1.5052933971186928 1.2169047648104758 1.971498643048565 1.5805633948634945 1.5678097489480736 1.0 8.81153241890548 -10.622853529890454 0.8977436423045259 0.998929039559952 1.54213351233404 0.0 0.27144357103533284 0.41624055900487195 0.5975593030985591 0.14575084493406854 0.03939727519145092 2.383123065665583e-11 10.622853529890454 0.543204472774088 DPSASNGGGS(ph)PARR ddPTM_A549_MK2206_60min_R1 4 DPSASNGGGSPARR 14 1 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 DPSASNGGGS(1)PARR;DPSASNGGGS(1)PARR;DPS(0.005)AS(0.018)NGGGS(0.977)PARR;DPSASNGGGS(1)PARR 125.41 2.4765e-07 97193600.0 3317.55 3920.97 3261.24 3378.19 5298.14 4409.66 3898.9700000000003 4177.280000000001 6017.84 5833.5 5241.9400000000005 True False 3877.4713336898394 4120.530625183046 3723.73287089836 4205.846701652714 4518.7906244036185 4876.2872943045895 4607.362379914852 4769.422232383469 4654.808848515785 4515.708298458295 3940.2216278158717 0.9840744252345989 1.045761130819213 0.945056705595133 1.067413739359652 1.1468366633245595 1.2375667550983913 1.1693155398643875 1.2104451685442976 1.1813571134312109 1.1460543910981538 1.0 11.944061064688505 -6.499358942977 5.353771856849396 1.1185080389517832 0.9975252765691501 0.49019049025122186 0.06746490337132872 0.19953673103909014 16.79465696191907 0.013077777710190606 0.0297664170189056 3.166948908105115e-07 6.499358942977 -0.12098276238263306 DPSASNGGGS(ph)PARR ddPTM_A549_PD325901_60min_R1 4 DPSASNGGGSPARR 14 1 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 DPSAS(0.009)NGGGS(0.991)PARR;DPSASNGGGS(1)PARR;DPSASNGGGS(1)PARR;DPSASNGGGS(1)PARR 159.79 1.6722000000000002e-19 114321000.0 7875.049999999999 7809.96 9008.9 7293.08 9217.21 8012.8099999999995 7566.359999999999 8133.7 8914.0 8568.900000000001 9402.3 True False 8674.519278694595 8468.132738257005 9620.29812891658 7743.556987813569 8569.824967248273 7947.556331998684 7854.30197027106 7971.466972735787 8539.37557927001 8027.858191622378 8245.876706090425 1.0519826560452419 1.0269535963352958 1.166679841551718 0.9390823151762819 1.0392860908190125 0.9638218730736781 0.95251266180949 0.9667215818116759 1.035593410335957 0.9735602990150195 1.0 13.009457174599959 -6.274660606482253 24.966472225494428 1.0026303082228119 1.076380196912301 0.43116351069563064 0.04653455812532574 638.5546657009776 1205822.7255437088 0.006436830986535254 0.015044482424088155 5.31299483261325e-07 6.274660606482253 0.07374988868948917 DPSASNGGGS(ph)PARREEK ddPTM_A549_MK2206_60min_R1 2 DPSASNGGGSPARREEK 17 2 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 DPSASNGGGS(1)PARREEK;DPSASNGGGS(1)PARREEK 102.67 3.1074000000000003e-09 129060000.0 1560.98 1523.19 1551.9499999999998 1570.75 1986.72 1358.19 1468.08 1251.83 2458.3999999999996 2828.7 2752.6000000000004 True False 1824.4352617031136 1600.7138649294848 1772.0398464972548 1955.5838205136477 1694.4761197920695 1501.9127643064442 1734.8111328646794 1429.2807360685908 1901.5763252580996 2189.694705382528 2069.053452104749 0.8817728995097749 0.7736454866843364 0.856449525117219 0.9451586755887461 0.8189619838329262 0.7258936509245908 0.8384564116020972 0.6907896625940969 0.9190561622870193 1.0583074609092658 1.0 11.014755201049153 -8.964804715142057 6.965801639201367 0.9648440127592568 0.8173640382157145 0.5338019727332182 0.07312238612902942 0.11745181630825278 15.585384316520972 0.012424416961875101 0.01296236383873554 1.0844144221986339e-09 8.964804715142057 -0.14747997454354234 DPSASNGGGS(ph)PARREEK ddPTM_A549_PD325901_60min_R1 3 DPSASNGGGSPARREEK 17 2 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 DPSASNGGGS(1)PARREEK;DPSASNGGGS(1)PARREEK;DPSAS(0.272)NGGGS(0.728)PARREEK 143.14 6.4244e-17 257420000.0 7440.5 7280.5 7305.0 7930.599999999999 7884.9 9662.2 8812.0 8971.2 8411.0 7934.599999999999 8960.9 True False 8195.854082593398 7894.05328591697 7800.7612285335235 8420.455150300595 7331.091825428297 9583.514246692203 9147.345482111421 8792.262378229752 8057.514920040398 7433.608001872694 7858.766107825284 1.0428932443265442 1.004490167744851 0.992619085681402 1.0714729303263033 0.9328553267577768 1.2194680583698143 1.163967136393466 1.1187840759728107 1.0252900785553614 0.945900145122115 1.0 12.940087099708078 -4.832085443339539 16.74285798107939 1.0380718593236846 4.166908593065115 0.0 0.0856827997689407 5394.9272439454335 540061.7355497766 0.01136906575771046 2570.6716020567237 1.4720228673390366e-05 4.832085443339539 3.12883673374143 DPSGSPAS(ph)AR ddPTM_A549_MK2206_60min_R1 1 DPSGSPASAR 10 0 A0A087WT25;O00294-2;O00294 A0A087WT25 TULP1 Tubby-like protein;Tubby-related protein 1 1 DPS(0.001)GS(0.001)PAS(0.999)AR 49.18899999999999 0.029666 31867000.0 3493.6 3342.7 3210.5 3443.1 4943.1 3927.2 3337.9 3742.7 5392.5 4810.9 5023.9 True False 4083.2342696805804 3512.829152173918 3665.7971759266966 4286.659654566631 4215.976538084974 4342.773697335623 3944.353223522565 4273.239186538039 4171.1073600530035 3724.114348684839 3776.3269774137334 1.081271376684928 0.9302237791335868 0.9707308709896899 1.1351399601266534 1.1164225352573522 1.1499993838748117 1.0444946232447028 1.1315861184945966 1.1045408369032812 0.9861737002539296 1.0 11.882767972102867 -6.24016969948192 24.64519761245907 1.0724493870088503 0.9876901748918397 0.27921972543524465 0.06195752877786629 750.5660466473387 869679.6821423796 0.009082865894042247 0.024008580619597847 5.752151295461636e-07 6.24016969948192 -0.08475921211701054 DPSGSPAS(ph)AR ddPTM_A549_PD325901_60min_R1 2 DPSGSPASAR 10 0 A0A087WT25;O00294-2;O00294 A0A087WT25 TULP1 Tubby-like protein;Tubby-related protein 1 1 DPSGSPAS(1)AR;DPS(0.001)GS(0.001)PAS(0.998)AR 67.334 0.0046342 80281000.0 9222.099999999999 9846.5 9652.1 9217.6 10542.0 9144.1 9070.6 9608.9 9417.8 10414.4 10603.0 True False 10158.320803048802 10676.299111294758 10307.149548792393 9786.95021731153 9801.56628792566 9069.633481316692 9415.786646622777 9417.24295146378 9022.0026172817 9756.833006667377 9298.898217954837 1.0924219799970005 1.1481251715047658 1.1084269670669982 1.0524849275599486 1.0540567342698992 0.9753449568686033 1.0125701374429763 1.0127267479151925 0.9702227517515472 1.0492461341095587 1.0 13.182844072962626 -6.688874535424359 1.095732008037342 0.9884851344419852 1.1254035535412887 0.7288076913282632 0.02790739095003879 0.12813892334965363 0.294704738565414 0.0033715868331710037 0.011151415323924168 2.0470359253772434e-07 6.688874535424359 0.13691841909930358 DPSPES(ph)NKKGESPSLESR ddPTM_A549_MK2206_60min_R1 1 DPSPESNKKGESPSLESR 18 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 DPS(0.371)PES(0.629)NKKGESPSLESR 120.33 6.5045e-11 67186000.0 6353.2 7149.1 5869.2 5198.0 8682.8 6520.4 5774.8 5791.5 9596.9 10033.0 9667.4 True False 7425.464839172963 7512.958653725002 6701.54081449898 6471.510233347084 7405.571622035606 7210.384400108779 6824.006409778037 6612.462860724887 7423.217473100168 7766.538331778882 7266.717773333376 1.0218457728497645 1.0338861213648967 0.9222239012902879 0.8905685393611323 1.019108193414609 0.9922477554541442 0.9390768463335739 0.9099655534979763 1.0215365044643812 1.0687821619108002 1.0 12.827088160308753 DPSSNDINGGMEPTPSTVSTPS(ph)PSADLLGLR ddPTM_A549_PD325901_60min_R1 2 DPSSNDINGGMEPTPSTVSTPSPSADLLGLR 31 0 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 DPSSNDINGGMEPT(0.165)PS(0.023)T(0.023)VS(0.044)T(0.039)PS(0.545)PS(0.163)ADLLGLR;DPSSNDINGGMEPT(0.005)PS(0.014)T(0.014)VS(0.042)T(0.042)PS(0.666)PS(0.217)ADLLGLR 65.962 0.00018681 5365200.0 1527.1 1387.45 918.79 1311.1599999999999 1413.04 1071.68 1346.1999999999998 1204.48 1109.6200000000001 1625.12 1515.18 True False 1682.1300678083974 1504.375280756199 981.1446145331022 1392.1473753395878 1313.792945123361 1062.9525933943717 1397.4303776689057 1180.4557015037199 1062.9865302074927 1522.5096458552864 1328.8224655173824 1.2658802145954489 1.1321115647833846 0.7383564320995202 1.0476549061033142 0.988689594897713 0.7999206974428347 1.0516306082504487 0.8883471886849118 0.7999462364550065 1.1457585082763415 1.0 10.375932653966451 -5.572553709594982 6.484760561029628 0.9121379740510092 1.234657819136848 0.40389893168438806 0.1217664206545372 0.09163855308211731 8.685683644703856 0.01430093389652737 0.057676460590061526 2.675754659715252e-06 5.572553709594982 0.32251984508583886 DPST(ph)PLPTEPK ddPTM_A549_MK2206_60min_R1 1 DPSTPLPTEPK 11 0 H0YAJ1;Q9UHI7-3;Q9UHI7;Q9UHI7-2 H0YAJ1 SLC23A1 Solute carrier family 23 member 1 1 DPS(0.172)T(0.828)PLPTEPK 58.674 0.011572 2811200.0 2492.5 2492.2 1802.8 2043.8 2420.9 1973.5 1555.1 2076.1 3003.5 2646.8 2906.9 True False 2913.173064225683 2619.042334953133 2058.464148500435 2544.5310917496686 2064.788816946839 2182.334460096723 1837.6415404595546 2370.393532789595 2323.212045603931 2048.8860417175647 2185.0365036413928 1.3332377099288002 1.198626352735281 0.9420731164307675 1.164525666966741 0.9449676531745993 0.998763387458211 0.8410118262999726 1.0848301750745593 1.0632371778376548 0.9376896167652433 1.0 11.093441666530984 -5.562715551517515 3.930990583581494 1.0185244574762282 1.3123531863647233 0.6056620630113987 0.08483521558062827 0.09705449839004718 3.108281996651109 0.010706351023476677 0.05341255134216756 2.7370608234266334e-06 5.562715551517515 0.2938287288884951 DPTDEGIFISKVS(ph)PTGAAGR ddPTM_A549_PD325901_60min_R1 1 DPTDEGIFISKVSPTGAAGR 20 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 DPTDEGIFIS(0.09)KVS(0.719)PT(0.191)GAAGR 90.694 1.0554999999999999e-06 3884100.0 1509.7 1893.2 1787.8 1786.9 2317.1 2510.9 2200.9 2434.2 1850.3 2102.4 1998.3 True False 1662.9636326176003 2052.7466081859784 1909.130858914747 1897.2727546556553 2154.3548895610456 2490.4520628862424 2284.656453878691 2385.6479714070406 1772.538325591575 1969.6541052021723 1752.5217682673906 0.9488975616329542 1.1713101916077204 1.0893621371688786 1.0825958279145205 1.2292885193037701 1.4210676911296787 1.303639415638979 1.3612658139850569 1.0114215741491037 1.1238970841140803 1.0 10.775216648884502 -8.855710636461021 11.003666247313438 1.0051087049937224 1.2039340483084413 0.2016089142110974 0.13163103278797894 0.3509526406206447 38.494772389777964 0.023255298215647563 0.02474240366699406 1.3940853505752e-09 8.855710636461021 0.1988253433147189 DPTQKPSPHPVKPLSAAPVEGS(ph)PDRK ddPTM_A549_PD325901_60min_R1 2 DPTQKPSPHPVKPLSAAPVEGSPDRK 26 3 Q9BXF6 Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 DPTQKPSPHPVKPLS(0.001)AAPVEGS(0.999)PDRK;DPTQKPSPHPVKPLS(0.007)AAPVEGS(0.993)PDRK 70.98 1.8806e-05 10005000.0 2499.3 2947.8 2850.3 2466.7 3379.3999999999996 3299.2 3303.3 2844.7 3608.3999999999996 2997.6000000000004 3808.5 True False 2753.027096112586 3196.221451304999 3043.7384982462836 2619.0624567178384 3142.0426022970955 3272.332409046273 3429.00888913512 2787.9602268760223 3456.7514965490127 2808.3310244263844 3340.07864407064 0.8242402019484789 0.9569299983337163 0.9112774945133629 0.7841319728705307 0.9407091679936634 0.9797171736825324 1.0266251949553196 0.8346989768714737 1.0349311692661765 0.8407978744487881 1.0 11.705666356844937 -7.620170671346415 0.6253689105405986 1.0135631538607075 0.8747220214505005 0.0 0.08648558938167729 0.6005461685922641 0.47123142033829524 0.01545053154448899 0.03412707355189655 2.3978903981603736e-08 7.620170671346415 -0.138841132410207 DPVQEAWAEDVDLR ddPTM_A549_MK2206_60min_R1 1 DPVQEAWAEDVDLR 14 0 P14618;P14618-2;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 121.28 5.5117999999999995e-06 1526500.0 751.27 1382.2 816.58 520.24 1596.4 1628.6 1409.4 1311.7 1795.0 1600.7 1519.9 False True 878.0660092119683 1452.5480761464664 932.383322821436 647.6988233544608 1361.5716747382928 1800.9373710228133 1665.4697364309025 1497.6374919127754 1388.4353660259872 1239.1007582655682 1142.4668828939946 0.7685702074687104 1.2714137257677018 0.816114092042306 0.5669300642778969 1.1917821821576846 1.5763584905505885 1.457783819704326 1.3108804415573907 1.2152959414533988 1.0845835243178248 1.0 10.157936630621954 -6.880805626916501 24.220946339633482 1.1890681370979463 0.8821595862944729 0.4077760789638122 0.22412548020608689 6.115181005266165 1241.5217377384631 0.036482073146413885 0.06894465921969675 1.3158136067069342e-07 6.880805626916501 -0.30690855080347346 DPYGS(ph)LDR ddPTM_A549_MK2206_60min_R1 1 DPYGSLDR 8 0 A1BQX2;A0A0G2JQ38;D6RA09;A0A0G2JN23;Q8N4S9-2;Q8N4S9-3;Q8N4S9 A1BQX2 MARVELD2 MARVEL domain-containing protein 2 1 DPYGS(1)LDR 68.335 0.007586399999999999 31299000.0 3388.4 3384.9 3022.9 2906.1 4173.2 3973.0 4036.4 4008.1 5065.0 4240.6 4341.3 True False 3960.2790815736444 3557.1769519231443 3451.592675006637 3618.094630459786 3559.32780820461 4393.42022293604 4769.76163199212 4576.260449291452 3917.7855871429692 3282.6455147753927 3263.235396215342 1.2136050884244283 1.0900767244829201 1.0577210209872536 1.1087446019542462 1.0907358422051538 1.346338737325377 1.4616664300479296 1.4023690888493483 1.2005831977940562 1.0059481208688048 1.0 11.672087345859373 -10.314123570209716 1.0390016407302638 1.0163508016443779 1.2155755529247023 0.2900774462951561 0.12873368610115252 0.5393874364016245 1.1440392433894606 0.0634022302444421 0.026852208826800155 4.851504402194236e-11 10.314123570209716 0.19922475128032446 DPYGS(ph)LDR ddPTM_A549_PD325901_60min_R1 2 DPYGSLDR 8 0 A1BQX2;A0A0G2JQ38;D6RA09;A0A0G2JN23;Q8N4S9-2;Q8N4S9-3;Q8N4S9 A1BQX2 MARVELD2 MARVEL domain-containing protein 2 1 DPYGS(1)LDR;DPYGS(1)LDR 132.88 0.0010764000000000001 80619000.0 7221.1 7147.299999999999 7297.6 6476.3 8029.0 5935.3 6092.7 5971.2 6939.700000000001 7917.0 8116.1 True False 7954.1807561071455 7749.628054451532 7792.859020033703 6876.326342255541 7465.070738546308 5886.964884642443 6324.561032553364 5852.099731684218 6648.048542456821 7417.11926887633 7117.871152196854 1.11749434430998 1.0887564397761953 1.0948300205783468 0.9660650207377296 1.0487785714191096 0.8270682004162853 0.8885467153477984 0.8221699447141622 0.9339939428947056 1.042041800178852 1.0 12.797230102060349 -6.373443913497618 1.4668921924321978 0.9428775166907473 1.1102718779884198 0.5072092580748006 0.07072238972330626 0.29499774908230786 1.196643351859823 0.010826390009565338 0.03871212209044568 4.23210161217074e-07 6.373443913497618 0.1673943612976725 DPYGS(ph)LDRHTQTVR ddPTM_A549_MK2206_60min_R1 4 DPYGSLDRHTQTVR 14 1 A1BQX2;A0A0G2JQ38;D6RA09;A0A0G2JN23;Q8N4S9-2;Q8N4S9-3;Q8N4S9 A1BQX2 MARVELD2 MARVEL domain-containing protein 2 1 DPYGS(1)LDRHTQTVR;DPYGS(1)LDRHTQTVR;DPYGS(1)LDRHTQTVR;DPYGS(1)LDRHTQTVR 117.18 1.4252000000000001e-06 66914000.0 6712.040000000001 8051.07 6360.0 6733.93 7828.969999999999 6004.72 5370.3099999999995 5390.3 7938.04 9880.439999999999 10111.699999999999 True False 7844.868258377279 8460.835074099637 7261.94363460327 8383.743152297604 6677.338883973845 6640.135484789455 6346.025812581403 6154.391532101423 6140.086614445087 7648.441741736403 7600.68582127719 1.0321263689674594 1.1131673210876003 0.9554326813870331 1.1030245624451862 0.8785179444309422 0.873623202027534 0.8349280527839317 0.8097152910692554 0.8078332348979175 1.0062831067593303 1.0 12.891913885628215 -6.771203891581691 24.988221049984332 0.8894157250656488 1.0485609157268083 0.5388086469754686 0.07281049919969931 140.15784954804326 358676.5797176546 0.012308705360812376 0.023466081071626257 1.6935425333003536e-07 6.771203891581691 0.1591451906611595 DPYGS(ph)LDRHTQTVR ddPTM_A549_PD325901_60min_R1 3 DPYGSLDRHTQTVR 14 1 A1BQX2;A0A0G2JQ38;D6RA09;A0A0G2JN23;Q8N4S9-2;Q8N4S9-3;Q8N4S9 A1BQX2 MARVELD2 MARVEL domain-containing protein 2 1 DPYGS(1)LDRHTQTVR;DPYGS(1)LDRHTQTVR;DPYGS(0.999)LDRHT(0.001)QTVR 144.97 1.9386e-13 74577000.0 5504.6 6292.8 5857.6 6631.799999999999 5907.2 6827.5 5575.6 6578.5 6708.7 7383.299999999999 7816.5 True False 6063.422939727654 6823.116340583518 6255.131960610263 7041.431224089417 5492.298650733684 6771.899103650414 5787.782509085389 6447.286656766583 6426.756669132681 6917.11717795814 6855.12005287598 0.8845101023699535 0.9953314147607035 0.9124759176151847 1.027178396552701 0.8011965667077499 0.9878600303738442 0.8443006780978544 0.9405067463496434 0.9375119063649973 1.0090439152930881 1.0 12.74296621662898 -10.20489273342245 0.7548395697515102 0.9980645680431186 0.9260435969626799 0.18653889006211077 0.06295098565946255 0.8425507654868021 0.9225200429984463 0.03207178139568453 0.01160078570945566 6.238889110397366e-11 10.20489273342245 -0.0720209710804387 DQALKDDDAETGLT(ph)DGEEKEEPKEEEK ddPTM_A549_MK2206_60min_R1 1 DQALKDDDAETGLTDGEEKEEPKEEEK 27 3 C9JX50;P21579 C9JX50 SYT1 Synaptotagmin-1 1 DQALKDDDAET(0.164)GLT(0.836)DGEEKEEPKEEEK 169.27 7.309899999999999e-49 14648000.0 1929.1 2988.1 2251.8 2398.4 2893.7 3433.3 2675.8 2540.1 3857.0 4113.1 2922.9 True False 2254.6849180332074 3140.1815267929774 2571.139100062835 2986.0081076682686 2468.0405632612114 3796.609527159908 3161.9582238837866 2900.166953730001 2983.3956583633617 3183.9478533279866 2197.0632620638553 1.0262266712862989 1.429263135483493 1.1702617509736994 1.3590906366816686 1.1233361395988244 1.728038328579345 1.43917486513954 1.3200197754004002 1.3579015724658057 1.4491835116013372 1.0 11.101360695866976 -10.618568953906527 0.856209903405701 0.9961096773833228 1.3363163048133753 0.0 0.21981602197297587 0.5681634131105877 0.7299118146940224 0.1222784595679432 0.03172527768213073 2.4067503635733505e-11 10.618568953906527 0.3402066274300525 DQDMDS(ph)DRAYQYQEFTK ddPTM_A549_PD325901_60min_R1 2 DQDMDSDRAYQYQEFTK 17 1 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 DQDMDS(1)DRAYQYQEFTK;DQDMDS(1)DRAYQYQEFTK 144.92 5.949800000000001e-17 46784000.0 8902.2 10828.4 9252.8 13107.1 12814.7 12622.1 10852.2 10347.0 12740.7 12540.5 12732.2 True False 9805.94479054673 11740.94727027311 9880.750649606425 13916.695798616123 11914.639680315027 12519.30980244392 11265.1864095517 10140.620967935529 12205.25268597772 11748.690689824874 11166.220116065691 0.8781794276505592 1.0514701616333457 0.884878727707529 1.24632110543774 1.0670253278611737 1.1211770565431929 1.0088630075761822 0.9081516271872023 1.0930514139173286 1.0521636299217438 1.0 13.44685328043877 -4.382488001424385 1.181555391739859 1.046380855643227 4.924617001657623e-10 0.2040737987403698 0.0938310379954557 12.63113483490108 3.0387276247815773 0.013219215149924338 26.784018159403633 4.144880352479822e-05 4.382488001424385 -1.0463808551507654 DQDMS(ph)SPTTMK ddPTM_A549_MK2206_60min_R1 2 DQDMSSPTTMK 11 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 DQDMS(0.474)S(0.474)PT(0.042)T(0.011)MK;DQDMS(0.591)S(0.385)PT(0.019)T(0.004)MK 56.205 0.0044098 24911600.0 2341.71 2374.9 1991.02 1588.96 2985.6 2652.3 2212.1499999999996 2518.9 3074.1 3084.3 3023.8 True False 2736.9333986872316 2495.772265981944 2273.376574743365 1978.255271331126 2546.422195000404 2932.9646255457515 2614.069020466593 2875.9617888077246 2377.8212583289637 2387.5544878606197 2272.907007365525 1.2041554669055947 1.0980529594454185 1.0002065933081814 0.8703634882203461 1.1203371659062746 1.290402386037467 1.150099415416252 1.2653231212222742 1.0461586200506472 1.0504409023878105 1.0 11.150322944287694 -8.980563552232505 23.475694863555113 1.020363877413365 1.1199301713561167 0.12088400966927282 0.1114447792365336 102.53415780701015 123845.61727847904 0.021243238359505805 0.021648327809717312 1.0457706470212558e-09 8.980563552232505 0.09956629394275174 DQDMS(ph)SPTTMK ddPTM_A549_PD325901_60min_R1 2 DQDMSSPTTMK 11 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 DQDMS(0.68)S(0.292)PT(0.022)T(0.006)MK;DQDMS(0.612)S(0.378)PT(0.008)T(0.003)MK 65.179 0.0016447 41635000.0 5309.700000000001 4948.7 5530.1 5296.6 6333.200000000001 4196.2 5029.3 4839.4 4833.9 4917.9 6052.0 True False 5848.736835205451 5365.744316464159 5905.405841192775 5623.7589525486255 5888.3778803539 4162.027538445676 5220.692763638557 4742.87437056414 4630.747993340063 4607.382954705938 5307.6423667888985 1.1019462938577589 1.010946847142305 1.1126231635620774 1.0595587577146754 1.1094149668407942 0.7841574941990083 0.9836180365703604 0.8935934342979404 0.872467976048214 0.8680658258995293 1.0 12.373855448693012 -7.227525898664479 24.998644976617616 0.9284529387292152 1.075922175920447 0.6481376575732622 0.06368602735785264 380.5822620169651 280538.80839351565 0.009838582232449572 0.017040339767652152 5.9220777017673934e-08 7.227525898664479 0.14746923719123173 DQDMSS(ph)PTTMK ddPTM_A549_MK2206_60min_R1 2 DQDMSSPTTMK 11 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 DQDMS(0.174)S(0.719)PT(0.057)T(0.05)MK;DQDMS(0.069)S(0.895)PT(0.026)T(0.01)MK 48.115 0.010962000000000001 10535500.0 5743.1 5604.299999999999 5710.299999999999 5463.3 7133.6 6284.4 5818.6 6456.9 8322.5 7818.8 8627.5 True False 6712.394874685869 5889.534932099291 6520.1064051375815 6801.808745256859 6084.256889822776 6949.4110367529 6875.764302821657 7372.185348426927 6437.467038301546 6052.527649607563 6485.053643113316 1.0350561836622545 0.9081705805708445 1.0054051614609987 1.048843867695669 0.9381968484229644 1.0716042486607185 1.060247868592922 1.1367963557642555 0.9926621108427833 0.9333041764480906 1.0 12.662902792883623 -5.976999162777048 24.87023421010582 1.0154496604615222 0.9679069829967892 0.08146013815547393 0.06219595545787258 399.52740855752484 431993.61089234677 0.007902304487851784 0.02456759591530575 1.0543889290161197e-06 5.976999162777048 -0.04754267746473295 DQDS(ph)SDDER ddPTM_A549_PD325901_60min_R1 2 DQDSSDDER 9 0 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 DQDS(0.5)S(0.5)DDER;DQDS(0.5)S(0.5)DDER 84.65799999999999 0.0013356 4358800.0 355.68 288.14 108.37 317.86 310.59 198.64 247.14 143.94 321.89 297.24 336.25 True False 391.7883717622229 312.4225690274179 115.72463988174916 337.4934902875633 288.77522987733164 197.0223416988821 256.5450479401969 141.06900378125448 308.3620827026276 278.47221567270424 294.89338166436994 1.3285763469867664 1.0594424576913655 0.39242874569989517 1.1444593581000684 0.9792530040772444 0.6681138131581439 0.8699586490963748 0.47837290543811123 1.0456731207809435 0.9443149049362006 1.0 8.204049633920262 DQDS(ph)SDDERALEDWVSSETSALPRPR ddPTM_A549_PD325901_60min_R1 2 DQDSSDDERALEDWVSSETSALPRPR 26 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 DQDS(0.61)S(0.39)DDERALEDWVSSETSALPRPR;DQDS(0.5)S(0.5)DDERALEDWVSSETSALPRPR 254.65 7.594599999999998e-125 29408000.0 1544.4499999999998 1736.34 891.31 1648.78 1231.44 1581.48 1663.78 1384.3899999999999 2225.7 2186.8 1986.6 True False 1701.2414270360034 1882.6674654857609 951.7996564824382 1750.621395948934 1144.9479026373722 1568.6009512180221 1727.09605835535 1356.7772554170547 2132.1615690802405 2048.725074798378 1742.2607940949797 0.9764562416843663 1.0805887797433424 0.5463014835140408 1.0047987085987877 0.6571621806091994 0.900325001018481 0.9912959438730256 0.7787452142730646 1.223790133088425 1.1759003484105786 1.0 10.766744877707067 -8.756973573727574 24.99986777341282 1.105678675731092 0.8662497539696895 0.35421024065738416 0.1589371559452208 97.97839631158675 548488.6272985892 0.027166408867539658 0.03029405797074106 1.749953167832047e-09 8.756973573727574 -0.2394289217614024 DQDSS(ph)DDER ddPTM_A549_PD325901_60min_R1 1 DQDSSDDER 9 0 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 DQDS(0.222)S(0.778)DDER 70.942 0.0033281999999999995 1789200.0 162.72 268.59 285.57 281.59 165.55 96.23200000000001 0.0 108.01 112.12 253.27 140.47 True False 179.23921461186725 291.22502191668684 304.9504974719121 298.98317476270955 153.92233911649535 95.4483184976179 0.0 105.85565581779419 107.40798630780276 237.27848897667135 123.19308051269601 1.454945471498257 2.36397223532919 2.4753865736841005 2.4269477921846185 1.24943981006005 0.7747863605682075 0.0 0.85926624593891 0.8718670388044524 1.926069938256134 1.0 6.944777415041571 -6.901688669611809 4.021661529355392 0.8473013474121985 2.2114699534661333 0.5950403222247727 0.4901157808180441 0.08581774499291478 2.6037509480387544 0.055288148843633464 0.10778914162268717 1.2540398296958945e-07 6.901688669611809 1.3641686060539349 DQDSS(ph)DDERALEDWVSSETSALPRPR ddPTM_A549_PD325901_60min_R1 2 DQDSSDDERALEDWVSSETSALPRPR 26 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 DQDS(0.17)S(0.83)DDERALEDWVSSETSALPRPR;DQDS(0.17)S(0.829)DDERALEDWVSSETSALPRPR 123.45 5.8424000000000006e-18 19349500.0 3133.2 2731.2 2659.9 2777.8 2497.3 2211.47 2819.0 2525.4 2949.5 3199.2 3152.1 True False 3451.2801574600676 2961.3678091472343 2840.416809278071 2949.3783971584753 2321.8982632172997 2193.4605215305423 2926.2785876159887 2475.0289158620258 2825.5427721625406 2997.2019660211126 2764.4116828082074 1.2484682288544338 1.0712470315343736 1.0274941416803212 1.0669099741910983 0.8399249206104556 0.793463772118895 1.0585538347325134 0.8953184980566229 1.0221135982511236 1.0842097017099952 1.0 11.43275676598836 -5.035197618762752 1.169934880870999 0.9822034394629792 1.4865101959526885 0.45014610048723314 0.08977649638796409 1.7293646092924566 1.3695688957101317 0.012825332461532923 1.201446963897108 9.221517212695717e-06 5.035197618762752 0.5043067564897094 DQGFRGDGGSTTGLSAT(ph)PPASLPGSLTNVK ddPTM_A549_PD325901_60min_R1 1 DQGFRGDGGSTTGLSATPPASLPGSLTNVK 30 1 H7C560;P15056;A0A2R8YDP5;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 DQGFRGDGGS(0.032)T(0.032)T(0.032)GLS(0.129)AT(0.775)PPASLPGSLTNVK 83.744 1.391e-06 10726000.0 1443.1 1456.9 1179.3 1284.8 2039.6 1897.8 1668.5 1660.1 1542.4 1328.1 1765.5 True False 1589.60244964593 1579.6780759909952 1259.3343897069926 1364.1591780074914 1896.345532238018 1882.3449460135837 1731.9956805382326 1626.9880031767445 1477.578291840483 1244.2435393450357 1548.3546924266027 1.0266397340487168 1.020230108590495 0.8133371480492926 0.881037907321844 1.2247487875443057 1.2157065530402125 1.1186039536095087 1.0507850760131108 0.9542892846630652 0.8035907698868663 1.0 10.596520282235875 -5.540896408373753 24.960852225054214 1.0066825197536913 1.0250377480500268 0.002285980613652483 0.1358217147708633 2280.8007196720714 3159720.799002065 0.017956817302685803 0.06956940162992517 2.8780848382248346e-06 5.540896408373753 0.018355228296335513 DQGRS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 DQGRSPGR 8 1 E9PMN7;E9PRM7;Q96BI1 E9PMN7 SLC22A18 Solute carrier family 22 member 18 1 DQGRS(1)PGR 45.598 0.039924 3978000.0 479.14 473.64 384.3 408.18 619.46 389.07 268.42 378.07 408.57 534.8 795.55 True False 527.7819400757746 513.5553050397244 410.38090898363214 433.39235155596043 575.9512666209854 385.90154291574737 278.6348699850598 370.52909725982244 391.3992237404476 501.0326367304608 697.7023934069571 0.756457115617101 0.7360664230087813 0.5881890514660517 0.6211707966768728 0.8254970486894166 0.5531033669403769 0.39936063372873826 0.5310704116270669 0.5609830601686808 0.7181179847812528 1.0 9.446467972464363 -10.70269476514856 0.963455379534524 0.99978925748026 0.6160627445391222 0.23096276253993442 0.1383614739124695 0.318960243293697 0.5268665663095506 0.0834758168921563 0.021872553732022536 1.982920190417699e-11 10.70269476514856 -0.3837265129411378 DQHLNNS(ph)S(ph)SSPQR ddPTM_A549_MK2206_60min_R1 3 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 2 DQHLNNS(0.5)S(0.5)S(0.5)S(0.5)PQR;DQHLNNS(0.5)S(0.5)S(0.5)S(0.5)PQR;DQHLNNS(0.5)S(0.5)S(0.5)S(0.5)PQR 51.927 0.028961 7419800.0 889.11 1100.71 640.99 412.5 868.3499999999999 436.0 589.95 679.06 1162.68 1359.49 915.68 True False 1039.1700313475214 1156.731437487466 731.8920204943947 513.5625185178285 740.6168652962889 482.13723060662346 697.1362785635092 775.3188345340313 899.3348364184377 1052.380264793189 688.2913845176474 1.5097821282127026 1.6805839263818478 1.0633461887762876 0.7461411403220333 1.076022280614933 0.7004841865694771 1.012850508149336 1.1264398363454347 1.3066193426911612 1.528974920310377 1.0 9.42687564133499 -5.766551419134428 24.93130812714702 1.0726156155009763 1.5951830991246743 0.46451850215692825 0.22043657708758965 65.92356807695661 321515.7575199482 0.028031573551082094 0.09116652165705162 1.7117824949082617e-06 5.766551419134428 0.522567483623698 DQHLNNS(ph)S(ph)SSPQR ddPTM_A549_PD325901_60min_R1 4 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 2 DQHLNNS(0.901)S(0.366)S(0.366)S(0.366)PQR;DQHLNNS(0.783)S(0.488)S(0.42)S(0.31)PQR;DQHLNNS(0.5)S(0.5)S(0.5)S(0.5)PQR;DQHLNNS(0.5)S(0.5)S(0.5)S(0.5)PQR 63.283 0.007592799999999999 19976200.0 935.8899999999999 1063.34 914.28 1125.03 1617.8100000000002 1574.0499999999997 1412.04 891.4000000000001 1115.66 1522.7 1813.29 True False 1030.9008638341957 1152.9513935920547 976.3285388122695 1194.5205479714875 1504.1806067415116 1561.2314586746131 1465.7759548979354 873.6203277102283 1068.7726900121581 1426.5564621343929 1590.266825392372 0.6482565361821202 0.7250049961317548 0.613940077993752 0.7511447317507609 0.9458668084649127 0.9817418270606286 0.9217169920753893 0.5493545572106598 0.672071298317159 0.8970547831068624 1.0 10.635053135312617 -10.890616634281582 1.1663410097692877 0.9987209118275618 0.7555591007892314 0.21691050714545534 0.13672400630935347 0.5187352172700586 1.2639170992683326 0.09998335901173848 0.024507287237086395 1.2864217247550802e-11 10.890616634281582 -0.24316181103833046 DQHLNNS(ph)SS(ph)SPQR ddPTM_A549_MK2206_60min_R1 1 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 2 DQHLNNS(0.753)S(0.31)S(0.553)S(0.383)PQR 50.053000000000004 0.010149 3337300.0 430.13 463.17 188.65 425.82 443.28 381.05 400.9 217.23 591.39 351.24 544.41 True False 502.72542833115085 486.74337464097704 215.40340670879036 530.1459191157859 378.07409920946526 421.372458079481 473.7383406663465 248.02301773897395 457.4411092557709 271.89464005322566 409.2179720483711 1.2285028094311723 1.1894476975303572 0.5263781686580687 1.2955098635138163 0.9238941714045137 1.0297017405425029 1.1576674853624191 0.6060902371845406 1.117842178255308 0.6644249730583355 1.0 8.676725696577648 DQHLNNS(ph)SSSPQR ddPTM_A549_MK2206_60min_R1 1 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.25)S(0.25)S(0.25)S(0.25)PQR 80.469 0.00068252 2199600.0 354.35 173.28 144.58 164.56 294.68 228.18 322.34 356.61 701.93 342.57 302.73 True False 414.15561697427125 182.09921186127875 165.08361803316674 204.87720738737914 251.33296236023557 252.32585614637452 380.9050055634573 407.1605595723221 542.9439757518785 265.18319907480213 227.55378607704367 1.8200339537925736 0.8002468998675539 0.725470759591202 0.9003462913950954 1.1044991458640943 1.1088624825646438 1.6739119666173912 1.7892937164071985 2.386002822067096 1.1653649172201344 1.0 7.830063780076147 -7.735584901610443 4.538361616523022 1.686249871319838 1.0346024524424517 0.2601593541277536 0.42997167683469656 0.22857587975604396 11.025340442267323 0.08599967147956222 0.12606663196034357 1.8382945446830922e-08 7.735584901610443 -0.6516474188773862 DQHLNNSS(ph)SSPQR ddPTM_A549_PD325901_60min_R1 1 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.095)S(0.864)S(0.021)S(0.021)PQR 110.92 4.851e-05 4802500.0 361.42 794.6 685.18 839.69 885.49 930.25 586.03 557.98 781.77 915.53 962.31 True False 398.1110923366584 861.5637306489425 731.6804351220528 891.5557442256465 823.2962371746634 922.674352423405 608.3316923379203 546.8506511731579 748.9149255784065 857.7232795546731 843.9519705856947 0.4717224512911239 1.0208682018373931 0.86696928335184 1.0564057852805477 0.9755249894177077 1.0932782724389847 0.7208131665546607 0.6479641854425066 0.8873904578463946 1.016317645374323 1.0 9.721017087084554 -14.99941373132147 0.015836261776937876 2.0497915799846433 6.252166524301286e-09 0.07995696878536163 0.1792405905617376 9483.611088441263 11.68141386106347 952.3925303202744 598.2645556714629 1.0013508450900672e-15 14.99941373132147 -2.049791573732477 DQHLNNSSS(ph)SPQR ddPTM_A549_PD325901_60min_R1 1 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.002)S(0.01)S(0.494)S(0.494)PQR 106.32 9.422e-05 3892400.0 281.94 358.66 360.9 222.81 445.66 497.22 453.19 191.78 336.14 381.6 599.13 True False 310.56234124674194 388.8855369173794 385.392844268001 236.57246766177542 414.35837904353554 493.17080517276577 470.4363934450833 187.95479745150053 322.0132047583375 357.50571087573655 525.4408081979897 0.5910510497116165 0.7401129315613505 0.7334657648493536 0.4502361902059067 0.7885919262049447 0.9385848938229702 0.8953175811723776 0.357708793300801 0.6128439202556204 0.6803919781217792 1.0 9.03738444106203 -10.77042640251921 1.0560675708651217 0.9973688083867811 0.6808930804294552 0.002753265963451268 0.18907680099561472 0.4918516082733836 0.9871263462032868 0.11277504801366857 0.0295946462182503 1.6965770874237514e-11 10.77042640251921 -0.3164757279573259 DQHLNNSSSS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 DQHLNNSSSSPQR 13 0 A0A5H1ZRS1;A0A4W8VX11;E7EV93;E9PGW9 A0A5H1ZRS1 PCM1 1 DQHLNNS(0.002)S(0.011)S(0.223)S(0.764)PQR;DQHLNNSS(0.004)S(0.238)S(0.758)PQR 130.64 1.2907e-08 76510000.0 2540.8 3118.0 2719.3 3031.5 3562.1 2904.4 2298.0 2431.1000000000004 2517.0 3483.9 4390.3 True False 2798.740145561899 3380.764802621953 2903.8480504792883 3218.7488699639707 3311.9103845778786 2880.7475293507523 2385.4516475138503 2382.609803338946 2411.2192431032786 3263.925959433908 3850.32093240471 0.7268848999072791 0.8780475347312161 0.7541833788555635 0.8359689819294381 0.8601647609955027 0.7481837436214926 0.6195461857315934 0.6188081059131069 0.6262385098369856 0.847702312803164 1.0 11.910762987168813 -10.939728994492482 1.2316088677507824 0.9982815102280527 0.7341498488497152 0.3057833523500535 0.0978304413165497 0.31910490563977856 0.8692102545085792 0.06974497952810826 0.016796723467522357 1.148870308147962e-11 10.939728994492482 -0.26413166137833743 DQKLS(ph)ELDDR ddPTM_A549_MK2206_60min_R1 2 DQKLSELDDR 10 1 Q15836;K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;P63027;F5GZV7;P23763-2;P23763-3;P23763 Q15836 VAMP3;VAMP2;VAMP1 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2;Vesicle-associated membrane protein 1 1 DQKLS(1)ELDDR;DQKLS(1)ELDDR 94.71700000000001 0.00015959999999999998 16519900.0 2044.65 2080.3 1775.93 1559.8000000000002 2471.6000000000004 2139.57 1830.29 1854.27 2819.2 2436.2 2456.3 True False 2389.7369331069403 2186.1783843202816 2027.7835784592746 1941.9510700220826 2108.0309141087214 2365.9778772683776 2162.8300013424973 2117.118450963712 2180.655701337306 1885.8607279856187 1846.3329195687343 1.2943152926424202 1.1840651061082355 1.0982762409570879 1.0517881414775851 1.141739331929972 1.2814470522580628 1.1714192919485453 1.1466612703077554 1.1810739429629313 1.0214088196109927 1.0 10.850446999133155 -10.696240564760966 0.7482174222596202 0.9885281803522289 1.1699984568847845 0.46305131807484723 0.06685904401403507 0.5913909461239675 0.5291984932310063 0.06564616370803283 0.013503672748338798 2.012609114926226e-11 10.696240564760966 0.18147027653255565 DQKLS(ph)ELDDR ddPTM_A549_PD325901_60min_R1 2 DQKLSELDDR 10 1 Q15836;K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;P63027;F5GZV7;P23763-2;P23763-3;P23763 Q15836 VAMP3;VAMP2;VAMP1 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2;Vesicle-associated membrane protein 1 1 DQKLS(1)ELDDR;DQKLS(1)ELDDR 92.06299999999999 0.00017509 19127300.0 3797.2 3362.2 3595.2 4709.1 4442.8 3246.6 3970.8 3878.0 4142.200000000001 5150.2 4823.5 True False 4182.6889486491045 3645.5443936419247 3839.191891693868 4999.970411857939 4130.753054827937 3220.1607660067975 4121.910966905134 3800.650247767853 3968.117738888518 4825.015493061367 4230.240078685764 0.9887592360830185 0.8617819144615805 0.9075588667030487 1.1819590186028666 0.9764819438123391 0.7612241163880291 0.9743917343305287 0.8984478840616122 0.9380360606203038 1.140600865036574 1.0 12.046523827558305 -10.586292352094722 0.9954790269133078 0.9982719585104218 0.9424540232666003 0.10946313642345817 0.10666395099433369 1.5411733217857435 2.8426475892311625 0.0564402678120531 0.017566428176084344 2.5924336375230854e-11 10.586292352094722 -0.055817935243821504 DQLIAQS(ph)LLEK ddPTM_A549_PD325901_60min_R1 1 DQLIAQSLLEK 11 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 DQLIAQS(1)LLEK 49.12 0.008910799999999998 12840000.0 5739.7 5670.2 5396.1 4309.3 6093.0 5602.1 5404.5 4430.7 5367.5 5421.2 5225.2 True False 6322.3901186561825 6148.0476535686275 5762.311795385317 4575.475673869613 5665.048699708884 5556.478354970333 5610.171204955879 4342.326212683089 5141.922640984043 5078.904506812219 4582.533525271869 1.3796713289252134 1.3416263339183931 1.2574510941615982 0.9984598363845387 1.2362263513113725 1.212534141720367 1.224250989985511 0.9475819846676344 1.1220698359602264 1.1083180251280107 1.0 12.161929720051699 -2.0000000000000004 0.19379635349152316 1.0127681187782356 2.6859674197329073 0.5243435799558902 0.09390834099935917 26.745240053434735 0.29247865433798803 0.08020591814913217 13.62725420890732 0.00999999999999999 2.0000000000000004 1.6731993009546717 DQLIYNLLKEEQTPQNK ddPTM_A549_MK2206_60min_R1 2 DQLIYNLLKEEQTPQNK 17 1 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;P00338-4;F5GXH2;F5GZQ4;F5H5J4;F5H6W8;F5H8H6;F5GXC7;F5GWW2;F5GXU1 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 169.19 9.3883e-30 8467200.0 7156.0 7840.599999999999 8791.6 7262.8 10499.6 7855.200000000001 8211.7 6912.700000000001 10932.7 10061.900000000001 9962.4 False True 8363.757852597391 8239.6530500897 10038.381078298444 9042.186326039478 8955.122748736017 8686.432050140244 9703.659596033509 7892.596394255887 8456.46090593444 7788.90980170696 7488.4611317475665 1.1168860604936544 1.1003132559715683 1.3405132111510083 1.2074825744510904 1.1958562101324788 1.1599755807389909 1.2958149111430304 1.0539677318741734 1.1292655135890348 1.0401215502989836 1.0 12.870453561998147 -9.632294820790834 0.4944106103648986 0.9998211501442664 1.2012044435550133 0.42111405198747665 0.07637649836587516 0.5943425193795293 0.3175384567457772 0.049707955028609474 0.022754062231861227 2.331874531923813e-10 9.632294820790834 0.2013832934107469 DQLIYNLLKEEQTPQNK ddPTM_A549_PD325901_60min_R1 1 DQLIYNLLKEEQTPQNK 17 1 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;P00338-4;F5GXH2;F5GZQ4;F5H5J4;F5H6W8;F5H8H6;F5GXC7;F5GWW2;F5GXU1 P00338 LDHA L-lactate dehydrogenase A chain 0 181.4 4.0270999999999993e-39 7693300.0 4784.6 5063.3 5759.3 4859.9 6930.0 6222.4 5613.1 5692.2 5431.0 5933.7 6187.5 False True 5270.329069763646 5490.002060652893 6150.160731484342 5160.0849853662885 6443.260707202128 6171.726837430147 5826.709592106176 5578.664605555486 5202.753956811246 5559.045169348422 5426.476725794169 0.9712248547407764 1.0117065525328364 1.1333616713493342 0.9509088946863778 1.1873746139138102 1.1373359086004204 1.0737555667399334 1.0280454312165217 0.958772002481927 1.024429929446505 1.0 12.405800081217972 -8.520383967111588 3.7756564127649272 0.9806624010316234 1.0694114396783956 0.16629322525709966 0.06908757207967473 0.2313130169818643 7.292348703954368 0.011480738535934941 0.013458590256874195 3.0172829098500145e-09 8.520383967111588 0.0887490386467722 DQLSQNVHALVS(ph)FR ddPTM_A549_MK2206_60min_R1 1 DQLSQNVHALVSFR 14 0 Q6ZV89-2;Q6ZV89 Q6ZV89-2 SH2D5 SH2 domain-containing protein 5 1 DQLSQNVHALVS(1)FR 69.737 0.00082349 1148700.0 280.21 243.5 266.95 159.12 285.6 305.98 189.45 174.96 457.47 244.8 348.48 True False 327.50259752324126 255.8931099274088 304.80752409706616 198.1044071431683 243.58861833203224 338.3586005069141 223.87061271947934 199.76111579252824 353.85377542947566 189.49950997901618 261.9427984412783 1.2502828841719809 0.9769045434733504 1.1636415504104693 0.7562888093202489 0.9299305794300711 1.2917270584278595 0.8546545812736521 0.7626135056250085 1.3508818625101533 0.7234385182820658 1.0 8.033107988502927 -8.772083410916077 24.996649439176487 1.1656941817852728 0.9977092381808677 0.0 0.22846483390273206 331.5611407322378 778641.8384557908 0.03535727370927757 0.037829243025299726 1.6901162954965388e-09 8.772083410916077 -0.1679849436044052 DQLSQNVHALVS(ph)FR ddPTM_A549_PD325901_60min_R1 2 DQLSQNVHALVSFR 14 0 Q6ZV89-2;Q6ZV89 Q6ZV89-2 SH2D5 SH2 domain-containing protein 5 1 DQLSQNVHALVS(1)FR;DQLSQNVHALVS(1)FR 111.01 3.0733e-06 6716300.0 620.96 727.05 611.33 893.26 834.45 722.357 726.21 743.51 589.6 796.14 875.8399999999999 True False 683.9994020734089 788.3210550821968 652.8185300259271 948.4346414593488 775.8411106962218 716.4743640887003 753.84631894736 728.6801097776884 564.82116238923 745.8715845298976 768.117232407202 0.890488291650252 1.026303045710455 0.8498943943492319 1.2347524589274612 1.0100555982383235 0.9327669447583435 0.9814209174618849 0.9486574171680517 0.7353319761088258 0.971038733491776 1.0 9.585182706066506 -8.532926292353276 24.459378625815397 0.8732798112946261 0.9914605762529749 0.0893533038132528 0.1124832327976908 229.15769059495787 557850.0541271653 0.021498607719746023 0.02439139456697714 2.931390713180463e-09 8.532926292353276 0.11818076495834884 DQNES(ph)LDEEMFYK ddPTM_A549_MK2206_60min_R1 1 DQNESLDEEMFYK 13 0 Q96AC1;Q96AC1-3;A0A0U1RRM8;H0YJ34 Q96AC1 FERMT2 Fermitin family homolog 2 1 DQNES(0.525)LDEEMFY(0.475)K 45.79 0.015778 2320200.0 1567.7 1394.1 1595.1 1488.4 2368.2 1722.9 1736.3 1398.5 2903.4 2231.0 2300.2 True False 1832.2894334148868 1465.0537353174566 1821.3091653389415 1853.0580668168145 2019.840917135569 1905.2161344315384 2051.7632349687624 1596.7416577266272 2245.7845357770775 1727.0155505032074 1728.9968577095624 1.0597413322324705 0.8473432029588783 1.053390674030297 1.0717532877830667 1.1682154933533504 1.1019199519861576 1.1866784059323134 0.9235075532999312 1.2988945154892382 0.9988540712508988 1.0 10.755719531681061 -6.1503632552861145 2.395777925827753 1.1283987716909796 0.9545046149863019 0.12974515110801454 0.11170783340348063 0.3353589721764684 3.7033888411152653 0.017757693151837776 0.05869410998319716 7.073538875506344e-07 6.1503632552861145 -0.17389415670467767 DQNTVET(ph)LQR ddPTM_A549_MK2206_60min_R1 1 DQNTVETLQR 10 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 DQNT(0.005)VET(0.995)LQR 60.49 0.008460899999999999 835110.0 539.87 624.58 454.55 507.74 688.08 469.12 393.66 492.11 1027.0 698.57 671.78 True False 630.9868574457455 656.368454203125 519.0120250171252 632.1363227933149 586.8643434940643 518.7619670233468 465.1829263824243 561.8680995236689 794.3861397819995 540.7625518220646 504.9584858152029 1.2495816491272207 1.2998463688425523 1.0278310783890172 1.251858005263139 1.1622031513078406 1.027335873335923 0.9212300405872671 1.11270156915294 1.5731711855471562 1.0709049694432993 1.0 8.980020974133353 DQNTVET(ph)LQR ddPTM_A549_PD325901_60min_R1 1 DQNTVETLQR 10 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 DQNTVET(1)LQR 75.479 0.010628 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DQPAFTPSGILT(ph)PHALGSR ddPTM_A549_MK2206_60min_R1 2 DQPAFTPSGILTPHALGSR 19 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 DQPAFTPS(0.003)GILT(0.896)PHALGS(0.101)R;DQPAFTPS(0.001)GILT(0.997)PHALGS(0.002)R 71.54 0.00077163 6388300.0 865.65 1110.32 881.72 965.6500000000001 1664.88 1099.6 1146.02 1239.98 1861.85 1701.1 1849.51 True False 1011.750556889454 1166.8305454398374 1006.761154324276 1202.2342933496764 1419.9783574532003 1215.9589421445937 1354.2369996768423 1415.750962279487 1440.1439477635024 1316.8203285347408 1390.225623120778 0.727759969362582 0.8393101997505531 0.7241710536627134 0.8647763883468794 1.0214013709987833 0.874648633949797 0.9741131059265413 1.018360573085547 1.035906635450056 0.9471990061431489 1.0 10.441103325123457 -6.614567310137168 0.7234497951093803 1.0159639340122584 0.7334149279255014 0.7159341299577487 0.057853086488546784 0.2934670023123424 0.25287025260845336 0.009276458933801095 0.046826830817681894 2.429028944162487e-07 6.614567310137168 -0.2825490060867569 DQPAFTPSGILT(ph)PHALGSR ddPTM_A549_PD325901_60min_R1 2 DQPAFTPSGILTPHALGSR 19 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 DQPAFTPS(0.001)GILT(0.999)PHALGSR;DQPAFTPS(0.001)GILT(0.998)PHALGS(0.001)R 105.32 1.4341999999999999e-09 11749600.0 2653.73 2554.8999999999996 2106.6 2526.04 2787.2 2758.7 2388.9 2358.92 2385.4 2988.4 2904.0 True False 2923.134716027226 2770.21038942233 2249.566544014883 2682.0677537469214 2591.4366873180065 2736.23406184407 2479.8108967562384 2311.86949006306 2285.149933451949 2799.711913996465 2546.826409972729 1.147755773452391 1.0877107205166736 0.8832822430324064 1.053101908808791 1.017516025894264 1.0743700674414511 0.973686658441237 0.9077452161679975 0.8972539017594128 1.0992943622044675 1.0 11.314484914472025 -7.929628277456105 5.867031107874897 0.9465539806545268 1.037503347183101 0.11282662026559898 0.08012392525989019 0.21319499283312796 13.22598169142794 0.01116376965959115 0.01547093874832592 1.1759036070207536e-08 7.929628277456105 0.09094936652857422 DQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLR ddPTM_A549_MK2206_60min_R1 2 DQPDGSSLSPAQSPSQSQPPAASSLR 26 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 DQPDGS(0.01)S(0.037)LS(0.945)PAQS(0.933)PS(0.059)QS(0.015)QPPAASSLR;DQPDGS(0.008)S(0.033)LS(0.953)PAQS(0.95)PS(0.045)QS(0.011)QPPAASSLR 85.09700000000001 3.5548e-07 4274300.0 733.8 745.46 832.47 369.96000000000004 1170.54 972.54 652.78 425.16999999999996 1090.77 1036.83 1656.46 True False 857.6475003124598 783.4007298829002 950.5267637575752 460.60021660813567 998.3551166049612 1075.4535372801959 771.3816762788164 485.4391495285161 843.712336601764 802.6093828902915 1245.115266029729 0.688809722048643 0.6291792826385565 0.7634046338444621 0.3699257644449588 0.801817425135581 0.8637381346302744 0.619526318023956 0.38987486763087004 0.6776178556480884 0.6446064912926126 1.0 10.282063590033314 -10.348174393482617 0.8444508261295489 0.9899928603026504 0.6457432230922421 0.0007491919313492579 0.17722628057723966 0.41862392614157873 0.5652358037622246 0.08230066581619465 0.028513631777503216 4.48565229778699e-11 10.348174393482617 -0.34424963721040835 DQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLR ddPTM_A549_PD325901_60min_R1 2 DQPDGSSLSPAQSPSQSQPPAASSLR 26 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 DQPDGS(0.038)S(0.164)LS(0.798)PAQS(0.8)PS(0.164)QS(0.036)QPPAASSLR;DQPDGS(0.113)S(0.137)LS(0.601)PAQS(0.511)PS(0.477)QS(0.128)QPPAAS(0.017)S(0.017)LR 64.152 0.00013808 7013500.0 724.1700000000001 754.0 755.78 775.55 593.49 596.52 374.92 426.54999999999995 464.98 615.1 740.1500000000001 True False 797.6872052942222 817.5422261632298 807.0717756743413 823.4539620981552 551.8053098293498 591.6621388955754 389.187785764096 418.04212562799825 445.4385076115068 576.2624810263775 649.1162421974229 1.2288819065655312 1.259469680493038 1.2433393639052983 1.2685770414718864 0.8500870475237979 0.9114887294957358 0.5995656254827283 0.6440173553704646 0.6862230193217544 0.8877646923077799 1.0 9.342333045541551 -6.782182809341783 6.008351647030154 0.8168438365821736 1.2514908489477954 0.7839836513379471 0.11414004813732126 0.078510636833 9.206221533878116 0.021845092179228844 0.04286001294416645 1.6512665775649462e-07 6.782182809341783 0.43464701236562175 DQPDGSSLS(ph)PAQSPSQSQPPAASSLREPGLESKEEESAMSSDR ddPTM_A549_MK2206_60min_R1 1 DQPDGSSLSPAQSPSQSQPPAASSLREPGLESKEEESAMSSDR 43 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DQPDGS(0.021)S(0.083)LS(0.602)PAQS(0.207)PS(0.024)QS(0.024)QPPAAS(0.009)S(0.009)LREPGLES(0.006)KEEES(0.006)AMS(0.006)S(0.006)DR 41.073 0.014446 7291600.0 516.09 496.18 466.84 346.72 373.2 691.12 631.89 297.33 782.92 514.77 676.03 True False 603.1933748109261 521.433442643867 533.0449318204697 431.6664155648522 318.3027743750505 764.2538596716734 746.6962336833561 339.4774380349359 605.5898700663319 398.48309947670816 508.15309352117015 1.1870308033179306 1.026134543490964 1.0489849193415617 0.8494810344923514 0.6263914919211049 1.5039834833551669 1.4694316401957475 0.6680613428574808 1.1917468923980925 0.784179225822438 1.0 8.98911939935015 -7.247139912835274 24.97148932526915 1.1148618143503828 0.9521483195942093 0.07565124780131105 0.2683113628278119 1643.9061362318914 2870792.7167150774 0.037167094007591724 0.06419185522258788 5.6605689808563776e-08 7.247139912835274 -0.16271349475617347 DQQEAALVDMVNDGVEDLR ddPTM_A549_MK2206_60min_R1 4 DQQEAALVDMVNDGVEDLR 19 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 ;;; 84.566 5.7251000000000005e-05 7475670.0 1490.35 1804.28 1990.8200000000002 1948.0 2432.0 2076.52 1757.0 1719.78 2803.58 3040.37 2689.7799999999997 False True 1741.8846444408227 1896.1101452970227 2273.1482117359865 2425.260087449042 2074.2560216509187 2296.2559681175803 2076.2241570236224 1963.5640816053626 2168.5736063972913 2353.548305371329 2021.8333918485464 0.8615371827686709 0.9378172073631764 1.1243004596227708 1.199535083962406 1.0259282639280394 1.1357295696942327 1.026901704855783 0.9711799644431094 1.072577797527907 1.164066393828573 1.0 10.981448402250606 -5.572309712222922 5.365924882636364 1.0517887263692205 0.8780412874400703 0.45545188499591105 0.07264287610455364 0.11364728793109147 7.149594774026775 0.009407286931691527 0.039736468243334364 2.6772583871814227e-06 5.572309712222922 -0.17374743892915023 DQQEAALVDMVNDGVEDLR ddPTM_A549_PD325901_60min_R1 4 DQQEAALVDMVNDGVEDLR 19 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 ;;; 116.96 3.4199e-14 8388510.0 3659.92 3875.97 3509.15 3676.42 4323.700000000001 3603.0 3702.54 4036.24 3798.97 4014.0299999999997 4065.5899999999997 False True 4031.472384109298 4202.611594617897 3747.3020212331817 3903.504113644381 4020.018227955247 3573.658362570844 3843.4421858076316 3955.7340268309763 3639.312502174041 3760.583460761354 3565.5482038984255 1.1306739254573672 1.1786719332592202 1.0509749993384 1.0947837163935825 1.1274614724209653 1.0022745895465812 1.0779386411338845 1.1094322108745964 1.0206880664787998 1.0546999355245528 1.0 11.799908193096382 -2.0000000055874465 0.12043895932164428 0.9610417116102088 1.568317208871155 0.3624302167942026 0.043729167614523674 41.45801465980328 0.3305965583942938 0.13846673173030075 4.253548978586152 0.00999999987134429 2.0000000055874465 0.6072754972609462 DQQSS(ph)SSER ddPTM_A549_PD325901_60min_R1 1 DQQSSSSER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DQQS(0.125)S(0.418)S(0.418)S(0.038)ER 53.211000000000006 0.022331999999999998 11725000.0 482.18 626.56 339.1 285.3 511.57 566.79 207.8 300.87 394.4 510.62 476.53 True False 531.130558637845 679.3624101125109 362.1133651739516 302.92233303668854 475.6390880206915 562.1742501586258 215.70794271252308 294.86891182205113 377.8247395629449 478.3793660570456 417.9198309725569 1.270891016111466 1.625580696976119 0.8664660978907462 0.7248335938779135 1.1381108355490428 1.345172467289645 0.5161467026116972 0.7055633400689568 0.9040603282301651 1.144667782200694 1.0 8.707082408274617 -5.769385656592624 24.999657248574888 0.9265298426161419 1.4482358839692142 0.4262303177763187 0.23314982196303305 102.29778499299529 321841.78682904143 0.030396671452339093 0.09698735884953268 1.7006476504436948e-06 5.769385656592624 0.5217060413530723 DQQSSS(ph)SER ddPTM_A549_PD325901_60min_R1 1 DQQSSSSER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DQQSS(0.002)S(0.736)S(0.263)ER 114.86 0.00021238 12978000.0 781.39 763.99 712.88 761.13 876.33 413.2 448.48 537.97 566.2 855.45 1019.7 True False 860.7161375710847 828.3741185231377 761.2603236956847 808.1432714483515 814.7796039743787 409.83503619602317 465.54715181767267 527.239766320699 542.4045830135386 801.4367410079899 894.2833644108786 0.9624646636897839 0.9262993716413818 0.8512518000345175 0.9036769592384478 0.9110977978564165 0.4582831935669603 0.5205812501324547 0.5895667830833747 0.6065242903974347 0.896177624343876 1.0 9.80458822885174 -7.103416566990031 21.292717530267627 0.7420443042166509 0.9081986189610853 0.31470981154234146 0.15609754006383222 17.16622454390157 3522.032143834489 0.030317839993255262 0.05251212242138091 7.88103820798974e-08 7.103416566990031 0.16615431474443443 DQRPS(ph)SPIR ddPTM_A549_MK2206_60min_R1 2 DQRPSSPIR 9 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DQRPS(0.567)S(0.433)PIR;DQRPS(0.5)S(0.5)PIR 103.21 0.00054845 64136500.0 3080.0 3520.52 3302.38 3182.35 4406.31 3348.32 3535.29 3107.1899999999996 4888.86 5019.83 4911.85 True False 3599.8287012297324 3699.6994306432903 3770.707141515902 3962.0258928611215 3758.1476360035617 3702.636999965064 4177.606431465019 3547.643697870288 3781.5410159051867 3885.8469165766537 3692.1020848364133 0.9750079002458651 1.0020577290747403 1.0212900550616741 1.0731084357426883 1.0178883328926358 1.0028533650713285 1.131498083062922 0.9608736747666267 1.0242243927750811 1.052475480712182 1.0 11.850226728017159 -5.435783057095245 2.7521935499049617 1.0206706548346167 0.9738708421385986 0.10187814277535867 0.04306266797498859 0.5959628092419669 7.351683809445166 0.005509412241990244 0.051530125835301976 3.666206667518823e-06 5.435783057095245 -0.04679981269601807 DQRPS(ph)SPIR ddPTM_A549_PD325901_60min_R1 2 DQRPSSPIR 9 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DQRPS(0.5)S(0.5)PIR;DQRPS(0.58)S(0.42)PIR 95.162 0.00077048 118992200.0 6073.6 5368.6 6164.6 5492.1 7531.6 5771.9 6565.200000000001 6876.200000000001 6379.700000000001 6981.9 6695.6 True False 6690.187400851994 5821.030763103341 6582.966826751231 5831.334543535917 7002.60639860946 5724.895560067345 6815.04227861529 6739.048796725453 6111.5833950043625 6541.061642461487 5872.083646905439 1.1393208617485706 0.9913058316481914 1.1210614873002402 0.9930605376524231 1.19252497404389 0.9749342659797325 1.1605833105267132 1.1476418256195824 1.0407861608417548 1.1139251474914864 1.0 12.51965680395291 -9.016312793645836 4.203988550525671 1.016769126118857 1.086933876127179 0.0 0.07666510542342228 0.24467696471730532 9.405396248619699 0.011843260835831936 0.011965526750204868 9.631350911312606e-10 9.016312793645836 0.07016475000832201 DQRPS(ph)SPIRHQGR ddPTM_A549_PD325901_60min_R1 2 DQRPSSPIRHQGR 13 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DQRPS(0.5)S(0.5)PIRHQGR;DQRPS(0.5)S(0.5)PIRHQGR 46.318999999999996 0.0078606 25103000.0 1227.4 1407.12 1211.43 1331.27 1547.29 1328.79 1164.49 1461.27 1156.29 1428.78 1917.44 True False 1352.0047444358763 1525.7029406880686 1293.6449247203782 1413.499524366464 1438.6136882607193 1317.9687747989199 1208.8053041833784 1432.123823505862 1107.6951524067895 1338.5665869628797 1681.6070356536195 0.8039956516418647 0.9072886282823187 0.7692908612371229 0.8405647064963988 0.8554993275831224 0.7837555069972943 0.7188393474540448 0.8516400045562449 0.6587122490102109 0.7960043925735573 1.0 10.715624895160301 -11.065699185712278 1.392033399854467 0.9994863359475187 0.7851884114426371 0.0 0.08835572865469003 0.27146538364139394 0.9423847468089545 0.05373612162133891 0.012019237157176264 8.596087237557634e-12 11.065699185712278 -0.2142979245048816 DQRPSS(ph)PIR ddPTM_A549_MK2206_60min_R1 3 DQRPSSPIR 9 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DQRPS(0.15)S(0.85)PIR;DQRPS(0.149)S(0.851)PIR;DQRPS(0.32)S(0.68)PIR 94.76700000000001 0.00026177 565798000.0 4453.73 4553.29 3785.94 4070.4 5433.57 3639.48 4433.69 4258.79 6132.860000000001 6515.37 6097.12 True False 5205.410740755809 4785.033012325961 4322.84322075313 5067.6481827272 4634.299050806654 4024.6073579087024 5239.234082387063 4862.486524497375 4743.777002164979 5043.543391879017 4583.036832048575 1.1357994560189992 1.0440747451263872 0.943226812083214 1.1057402260636007 1.0111852076770602 0.8781529595758758 1.1431795716215472 1.0609747865202928 1.0350728514753296 1.1004806587217846 1.0 12.162088164788518 -2.0000000353279987 0.004786742815132806 3.482191089965946e-10 2.1328880157778682 0.0 0.07930639514915534 132363.4146543878 47.670546595096454 9872.60002592753 11422.032884011023 0.009999999186542801 2.0000000353279987 2.132888015429649 DQRPSS(ph)PIR ddPTM_A549_PD325901_60min_R1 4 DQRPSSPIR 9 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DQRPS(0.03)S(0.97)PIR;DQRPS(0.034)S(0.966)PIR;DQRPS(0.042)S(0.958)PIR;DQRPS(0.202)S(0.798)PIR 112.84 7.309100000000001e-05 549115000.0 6140.200000000001 5612.110000000001 6556.2 5666.6 6833.3 5978.200000000001 5834.299999999999 5507.07 6912.6 6108.6 6458.799999999999 True False 6763.548583823665 6085.062205401759 7001.143157633328 6016.613012217662 6353.3525816052415 5929.5155212658965 6056.327479151457 5397.22716863716 6622.087461214029 5722.9019534998015 5664.408545706563 1.1940432137350356 1.0742625918135862 1.2359883827482687 1.062178507017835 1.1216268265856062 1.0468022342350776 1.069189736277401 0.9528315489757676 1.1690695344059099 1.0103264811005863 1.0 12.467709608276646 -6.297996851773897 24.81746586253193 1.0712783603846177 1.1587145525752545 0.3401127959838337 0.06739383105285057 595.6227159192987 404344.3528037617 0.010561431143061076 0.024543226712227192 5.035042587064989e-07 6.297996851773897 0.08743619219063681 DQRS(ph)ASRDR ddPTM_A549_PD325901_60min_R1 1 DQRSASRDR 9 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 DQRS(0.592)AS(0.408)RDR 42.083 0.026833999999999997 34803000.0 1548.4 1930.6 1086.3 1531.3 1228.0 1153.0 856.0 1164.1 1613.7 1761.1 1922.3 True False 1705.5924281281673 2093.298437441288 1160.0228504525612 1625.8849231653721 1141.749516370016 1143.6103502759313 888.5755484211729 1140.8811122812167 1545.8818007929112 1649.9038454487934 1685.8692864636967 1.0116990930571148 1.2416730373160902 0.6880858793541709 0.9644193272990051 0.6772467625677943 0.6783505455958478 0.5270726239310413 0.6767316549637992 0.9169642114042986 0.9786665304933903 1.0 10.719276966208298 -5.753725440443801 24.994318396634696 0.8610816164944934 1.1266860639520797 0.3069535263631967 0.1694994207506115 200.63867198801344 650082.778782237 0.0268787043335948 0.1002817303663533 1.7630903141074109e-06 5.753725440443801 0.26560444745758627 DQS(ph)GEVDFK ddPTM_A549_MK2206_60min_R1 1 DQSGEVDFK 9 0 A6NIT2;A6NMN0;P46020-3;P46020-2;P46020 A6NIT2 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform 1 DQS(1)GEVDFK 87.21600000000001 0.0011533 7022600.0 2975.5 3083.4 3271.4 2281.7 3870.3 3277.0 2787.3 3247.2 4406.0 4178.9 4366.8 True False 3477.6916560094373 3240.331889733765 3735.333711673134 2840.7166024294033 3300.98399695541 3623.7699649034525 3293.7163306044067 3707.5005441329295 3408.048034936212 3234.883587627904 3282.4030424511425 1.059495622881358 0.9871828193633525 1.1379875241901325 0.8654380847478411 1.0056607778703472 1.1039990878747765 1.003446648082807 1.1295080147635814 1.0382783560885454 0.9855229677133881 1.0 11.680536681236205 DQS(ph)LS(ph)PSKGENK ddPTM_A549_PD325901_60min_R1 2 DQSLSPSKGENK 12 1 Q5TCQ9;Q5TCQ9-1 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 2 DQS(0.984)LS(0.825)PS(0.19)KGENK;DQS(0.978)LS(0.591)PS(0.431)KGENK 61.641000000000005 0.0020122 18473000.0 4975.9 5324.2 4821.4 5014.7 5545.7 6103.7 5158.4 5412.9 5697.2 5633.7 6028.7 True False 5481.049704936023 5772.889019281529 5148.609197433473 5324.446629789978 5156.189163626385 6053.993490875288 5354.705734784792 5304.9354631620945 5457.766496546679 5277.987220546743 5287.208119078026 1.0366623710457985 1.091859614614186 0.9737859909193962 1.0070431331381835 0.9752196334056001 1.145026515795821 1.0127662112378766 1.0033528742740618 1.0322586842861776 0.9982559985679377 1.0 12.368290400950135 -10.912341042528983 0.494325049291621 0.991144918847533 1.0321431412771676 0.06389253513943793 0.04744113977600883 4.909366910635245 1.4244829450402394 0.09983955275023479 0.011312146325477621 1.2236549108272424e-11 10.912341042528983 0.04099822242963458 DQS(ph)LSPSKGENK ddPTM_A549_PD325901_60min_R1 1 DQSLSPSKGENK 12 1 Q5TCQ9;Q5TCQ9-1 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 DQS(0.821)LS(0.17)PS(0.009)KGENK 51.147 0.015607 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DQS(ph)PFSK ddPTM_A549_MK2206_60min_R1 2 DQSPFSK 7 0 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 DQS(0.995)PFS(0.005)K;DQS(0.989)PFS(0.011)K 123.86 0.006201399999999999 325630000.0 19256.6 18618.9 18863.1 16035.8 24353.0 18233.1 17767.5 20312.7 26188.0 22684.0 25207.0 True False 22506.64330133133 19566.522482248183 21538.17122230893 19964.57171987442 20770.705960224026 20162.51453984776 20995.624763754826 23192.087430034786 20256.459813642665 17559.6686452778 18947.406222191537 1.187848248852719 1.0326755152022615 1.1367345466570007 1.0536836274978663 1.0962295164124896 1.0641305888208101 1.10810020736054 1.2240243945829272 1.0690888017124973 0.9267584406730883 1.0 14.20971274580863 -9.661001214829493 1.2621545081017431 1.014606784385122 1.1061417801531361 0.4143438813243976 0.06096036933653441 0.3193841958971813 1.0376633694112862 0.01427759121461331 0.01019081694869032 2.1827238062140446e-10 9.661001214829493 0.09153499576801405 DQS(ph)PFSK ddPTM_A549_PD325901_60min_R1 4 DQSPFSK 7 0 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 DQS(0.877)PFS(0.123)K;DQS(0.995)PFS(0.005)K;DQS(0.998)PFS(0.002)K;DQS(0.999)PFS(0.001)K 129.28 0.0057358999999999995 592826000.0 59324.6 58775.7 60305.4 53214.1 69897.5 53585.9 59510.7 55101.2 62970.1 61960.9 62055.9 True False 65347.189719537724 63728.93451233709 64398.08708982962 56501.01409901027 64988.14073328446 53149.51419674855 61775.412254004535 54002.1633399448 60323.68568142141 58048.678199686656 54423.417704761276 1.200718228943949 1.1709836904778164 1.1832789965374721 1.0381746770392046 1.1941209037226437 0.9765927322880849 1.1350888066076024 0.9922596855805396 1.1084141390874822 1.066612143224666 1.0 15.731939937954145 -2.0000000000000013 0.1779782511338489 1.018127245455538 1.8031712304531093 0.416752855843428 0.06261792310912165 36.35068401071461 0.3792134911995089 0.06474097861865973 7.778223970175921 0.009999999999999969 2.0000000000000013 0.7850439849975714 DQS(ph)PSRAPGLR ddPTM_A549_MK2206_60min_R1 2 DQSPSRAPGLR 11 1 P09601 P09601 HMOX1 Heme oxygenase 1 1 DQS(0.946)PS(0.054)RAPGLR;DQS(0.8)PS(0.2)RAPGLR 111.96 4.6179e-05 104560000.0 5181.3 6121.9 5180.9 4406.6 6070.0 4804.0 4303.5 3849.8 6849.4 7458.7 8382.5 True False 6055.77676937715 6433.478561250939 5915.629524609445 5486.217197819789 5177.11104088038 5312.356091362888 5085.390244593715 4395.520939518035 5298.021836244236 5773.7744897078765 6300.893904769332 0.9610980379773344 1.0210421978984996 0.9388555995414763 0.8707045826731205 0.8216470740701842 0.843111496821397 0.8070902829746797 0.6976027538236973 0.8408365410238072 0.9163421217642685 1.0 12.621340802241892 -6.026200316566685 3.8990518394443385 0.882819165038896 0.9904947976936133 0.2922825253351501 0.07630229875769168 0.3057878411594196 10.179429127516576 0.013994530891922107 0.04315797068821816 9.414552539472826e-07 6.026200316566685 0.10767563265471725 DQS(ph)PSRAPGLR ddPTM_A549_PD325901_60min_R1 2 DQSPSRAPGLR 11 1 P09601 P09601 HMOX1 Heme oxygenase 1 1 DQS(0.977)PS(0.023)RAPGLR;DQS(0.955)PS(0.045)RAPGLR 115.75 1.6979e-05 196983000.0 10983.2 11156.0 11183.5 10750.7 14141.5 11612.400000000001 11189.6 11340.5 11400.2 12363.900000000001 13464.1 True False 12098.206378595507 12096.155271985404 11942.479561848679 11414.74632238881 13148.249825526538 11517.832464478957 11615.426351184073 11114.30483104985 10921.089239263401 11583.241243963626 11808.101055962055 1.024568329933709 1.0243946265922164 1.0113801961255044 0.9666877229701014 1.113494012560794 0.9754178432156508 0.9836828374126508 0.9412440474870514 0.9248810784651279 0.9809571572149702 1.0 13.52748935297024 -7.4977068578040384 24.88204926889918 0.9635431411419831 1.025647455746832 0.3922729915884917 0.03745241704962269 618.3408486642925 611221.4787170104 0.006119302168477654 0.009757392024173306 3.179019136381554e-08 7.4977068578040384 0.06210431460484889 DQSDET(ph)SEDDKKQSK ddPTM_A549_MK2206_60min_R1 2 DQSDETSEDDKKQSK 15 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 1 DQS(0.002)DET(0.566)S(0.429)EDDKKQS(0.003)K;DQS(0.006)DET(0.497)S(0.497)EDDKKQSK 47.155 0.010159999999999999 39025000.0 7657.2 7429.3 7437.6 6973.7 2952.6 1637.0300000000002 1747.75 2024.28 2981.7 11870.2 12943.7 True False 8949.548159433869 7807.419636894037 8492.363518353033 8682.25681306129 2518.276451285568 1810.259428027432 2065.2935517575625 2311.227889097501 2306.349710796484 9188.713575788068 9729.422062053414 0.9198437586893058 0.8024546151969755 0.8728538513582278 0.8923712793716426 0.25883104209317037 0.18606032470189426 0.21227299407768502 0.23755037805500562 0.2370489938751536 0.9444254260102241 1.0 13.248138394604451 -6.73500484769818 24.821531449628107 0.5112867156344922 0.8669915860196218 0.34278840365906527 0.27685572526032926 282.621381950755 265374.61697236553 0.05117612926207566 0.10650609868459669 1.8407514544492484e-07 6.73500484769818 0.35570487038512955 DQSDETS(ph)EDDKKQSK ddPTM_A549_PD325901_60min_R1 3 DQSDETSEDDKKQSK 15 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 1 DQSDET(0.154)S(0.846)EDDKKQSK;DQSDET(0.159)S(0.84)EDDKKQSK;DQSDET(0.112)S(0.888)EDDKKQSK 127.5 1.1360999999999998e-09 82934000.0 8772.099999999999 9241.599999999999 8240.3 10443.7 11847.0 12039.6 11086.3 12326.400000000001 11715.2 11334.4 12371.2 True False 9662.637134321287 10020.422065398021 8799.53631094932 11088.783629636395 11014.907589931265 11941.553489316653 11508.19521315613 12080.540282126267 11222.850884705418 10618.744049659199 10849.620827498149 0.8905967579836085 0.9235734800981671 0.811045514940676 1.0220434249215504 1.0152343353801083 1.100642472136079 1.0607002213375825 1.1134527624696686 1.034400285792599 0.9787202906433562 1.0 13.405357003800148 -6.333746340605493 7.539215211867128 1.0331744299119512 0.880203312361518 0.7205016598922127 0.045737343567117214 0.11817839639902178 10.999702355003468 0.0065624756949587675 0.015331327448987474 4.637176853290407e-07 6.333746340605493 -0.15297111755043313 DQSLALS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DQSLALSPK 9 0 E7EX48;P51957-3;P51957;H7C5M0 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 DQSLALS(1)PK;DQSLALS(1)PK 92.24700000000001 0.0010103999999999998 12142500.0 6639.0 6467.2 6015.6 5636.9 9607.8 7745.7 6970.200000000001 7508.0 10126.099999999999 8720.3 9506.099999999999 True False 7759.500892033825 6796.3528563553955 6868.70253589928 7017.940753050052 8194.505347375696 8565.344832820467 8236.595116269815 8572.281992285672 7832.554518058914 6750.378173488623 7145.4730149869065 1.0859324324308632 0.9511410710110769 0.9612663180580028 0.9821520196536508 1.1468107611894343 1.1987092827662384 1.152701171636138 1.1996801295458228 1.0961561959062645 0.9447069717190714 1.0 12.802813802461573 -6.737956439694852 24.736793450073876 1.0841462738047467 0.9895630116064815 0.2740652071283496 0.08167923208759681 262.38601398498383 276394.0427009032 0.012492114416824617 0.025991981609772296 1.8282835861838922e-07 6.737956439694852 -0.09458326219826518 DQSLALS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DQSLALSPK 9 0 E7EX48;P51957-3;P51957;H7C5M0 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 DQS(0.001)LALS(0.999)PK;DQS(0.001)LALS(0.999)PK 80.87100000000001 0.0016384 18016600.0 10461.0 10497.2 9867.3 10529.4 12213.7 10688.0 10524.3 10564.4 10670.5 11992.7 12830.3 True False 11522.993019018819 11381.835883926611 10536.954314895109 11179.77712399757 11355.851846977583 10600.960471595105 10924.807995617939 10353.684754388527 10222.0559926633 11235.478875313018 11252.254437972835 1.0240608299908618 1.0115160429999235 0.9364305058136784 0.9935588628594572 1.0092068135835197 0.9421188020615836 0.9708994811519843 0.9201431421109785 0.9084451519481342 0.9985091376352809 1.0 13.457926460159651 -7.266624755767032 24.768447491198057 0.9529695754843006 0.9925458099930066 0.23603161645802018 0.03379825438161333 510.90293571003997 2440377.886110366 0.00602507822808139 0.009807217504055936 5.412217537726543e-08 7.266624755767032 0.039576234508705954 DQT(ph)PDENDQVVVK ddPTM_A549_MK2206_60min_R1 1 DQTPDENDQVVVK 13 0 O00425;O00425-2 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 1 DQT(1)PDENDQVVVK 137.8 1.239e-08 7067200.0 1173.7 2107.2 2129.1 1669.0 2901.1 2147.1 2119.6 2125.4 2255.2 2567.9 2904.7 True False 1371.7918657900445 2214.447479421092 2431.038395036764 2077.905074924257 2474.3520330639312 2374.304696870368 2504.7038834531977 2426.6819587645136 1744.4008008143774 1987.8096065159943 2183.3828243583025 0.6282873761238893 1.0142277637784016 1.1134274612383872 0.9516906754705073 1.1332653190542272 1.087443150317983 1.1471666148099025 1.1114321921432706 0.7989440886652838 0.9104265107976256 1.0 11.092349392719445 -8.753665116461725 24.98982774659013 0.905056928939773 1.033601415324732 0.11782834093024519 0.14454502079843218 266.9080731165831 857956.3695629991 0.02562630753908394 0.028794898251920553 1.7633352263036418e-09 8.753665116461725 0.12854448638495897 DQTASAPAT(ph)PLVNK ddPTM_A549_MK2206_60min_R1 2 DQTASAPATPLVNK 14 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 DQTAS(0.01)APAT(0.99)PLVNK;DQTAS(0.001)APAT(0.999)PLVNK 145.55 2.4699e-20 5674100.0 6032.8 6110.3 4733.5 5816.1 6191.8 6504.9 5855.8 5406.8 8899.6 6791.0 8497.2 True False 7050.989152200886 6421.288170798547 5404.781477106064 7241.044761094653 5280.994422227865 7193.244200396839 6919.723061297054 6173.230457630554 6883.854809740885 5256.908383445664 6387.110729210373 1.1039403340785023 1.0053510018907093 0.8462013117117584 1.1336964502555054 0.826820552534987 1.1262125404370633 1.0833886172742972 0.9665137680169417 1.077772893189206 0.8230495142982382 1.0 12.640947746461684 DQTASAPAT(ph)PLVNK ddPTM_A549_PD325901_60min_R1 2 DQTASAPATPLVNK 14 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 DQTAS(0.055)APAT(0.944)PLVNK;DQTAS(0.05)APAT(0.95)PLVNK 126.63 1.8805e-07 23084100.0 11661.6 14449.0 12745.1 14408.8 13814.9 14566.4 13219.0 13741.1 15304.4 13581.099999999999 15463.7 True False 12845.477047183824 15666.667938769911 13610.059128512323 15298.79885124093 12844.589082817709 14447.77606787453 13722.05627871435 13467.02298081559 14661.20929048462 12723.587028234968 13561.762932470838 0.9471834238031093 1.1552088041046134 1.0035612033835106 1.1280833419238674 0.947117948217779 1.0653317079656597 1.0118195065819742 0.9930141861255801 1.0810695750610257 0.9381956528506312 1.0 13.727257110281501 -6.740587139388271 24.99998482518259 1.0304089705490025 1.0614913898774134 0.05068545949957748 0.0684471291749232 623.1138805262962 747055.1267488879 0.008368613563339674 0.017406587305210504 1.8172423973559026e-07 6.740587139388271 0.031082419328410937 DQTPAPKT(ph)PNR ddPTM_A549_MK2206_60min_R1 3 DQTPAPKTPNR 11 1 Q9BYW2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 DQTPAPKT(1)PNR;DQT(0.02)PAPKT(0.98)PNR;DQT(0.002)PAPKT(0.998)PNR 84.46799999999999 0.00020425 34865200.0 7268.5 7614.4 7220.6 6766.9 8243.199999999999 5974.900000000001 5648.9 7266.099999999999 9591.8 10215.5 10893.400000000001 True False 8495.24510223646 8001.940436268014 8244.589655348485 8424.790803777689 7030.636199701008 6607.159952182373 6675.232009454036 8296.091926497988 7419.272614957137 7907.811455027119 8188.268137454723 1.0374898525095393 0.9772445530533607 1.0068783187052872 1.0288855545950022 0.8586231034058982 0.8069056656754979 0.8152190301292448 1.0131680823384444 0.9060856936303721 0.9657489620857993 1.0 12.999342631068634 -6.732514839181832 24.998421308107005 0.9312804214359249 1.0096870089825316 0.3233685480720876 0.0671979707287583 284.7345743244494 246084.36881133137 0.011070785093710447 0.02304251471731653 1.8513356358019885e-07 6.732514839181832 0.07840658754660668 DQTPAPKT(ph)PNR ddPTM_A549_PD325901_60min_R1 2 DQTPAPKTPNR 11 1 Q9BYW2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 DQT(0.006)PAPKT(0.994)PNR;DQT(0.001)PAPKT(0.999)PNR 73.02199999999999 0.00066349 51320000.0 7974.1 7864.0 8859.5 9081.2 10545.9 9172.2 9689.3 9725.0 8838.8 10089.3 10008.2 True False 8783.62476177784 8526.7268787104 9460.758946501397 9642.125099098403 9805.192365379937 9097.504644233215 10058.031613688401 9531.027245885085 8467.335973754967 9452.259876149294 8777.254847206976 1.0007257297049876 0.9714571386090839 1.0778721948026746 1.098535392551196 1.1171137828474995 1.0364863277415428 1.145919970284215 1.0858779210356377 0.9646906830384869 1.0769038885953177 1.0 13.099554081190169 -8.761002230249538 24.999958453385453 0.9833261530908132 1.0683116763637825 0.08794648358423762 0.05564641132822451 9.245865958817168 528748.6774492312 0.008774976209926393 0.009655509183451559 1.733795094105122e-09 8.761002230249538 0.08498552327296938 DQVAEKDPTQHKEDEGEIQPENKEDS(ph)IENVR ddPTM_A549_MK2206_60min_R1 1 DQVAEKDPTQHKEDEGEIQPENKEDSIENVR 31 3 A0MZ66;A0MZ66-5;A0MZ66-6;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 DQVAEKDPT(0.001)QHKEDEGEIQPENKEDS(0.999)IENVR 40.986000000000004 0.016225 20664000.0 4898.2 6428.4 5210.9 4941.0 7979.6 5622.4 5567.1 6266.0 9648.9 8252.4 7605.1 True False 5724.896410507619 6755.578102083587 5949.883975716062 6151.545221809919 6805.811410512204 6217.358636152933 6578.5700082903895 7154.224688820195 7463.439556127101 6388.177108459284 5716.543779917835 1.0014611329697372 1.1817591821505626 1.040818404403365 1.0760951824457707 1.1905465387007015 1.0876079805413992 1.150795001588345 1.2514947780078094 1.305586005016894 1.1174894052068471 1.0 12.480927442396876 -6.744664334267618 23.85199595636464 1.1544572825712613 1.080212758497622 0.1744833168437071 0.08599518485065347 310.7794922525766 441884.18294424814 0.01705501871089123 0.035416814459178575 1.800261797937885e-07 6.744664334267618 -0.07424452407363935 DQVAEKDPTQHKEDEGEIQPENKEDS(ph)IENVR ddPTM_A549_PD325901_60min_R1 1 DQVAEKDPTQHKEDEGEIQPENKEDSIENVR 31 3 A0MZ66;A0MZ66-5;A0MZ66-6;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 DQVAEKDPTQHKEDEGEIQPENKEDS(1)IENVR 73.303 3.9504e-06 14184000.0 2340.9 2131.2 2021.4 2226.5 2729.5 1957.3 1886.1 2403.0 2389.9 2519.0 3075.3 True False 2578.546444720501 2310.8037034470503 2158.5843596656628 2364.0258482516197 2537.7893362638106 1941.3603977407472 1957.8765676135213 2355.070279882969 2289.460814101121 2359.949910104772 2697.0575959328967 0.9560590951446094 0.8567869321484611 0.8003478913171006 0.876520342693652 0.9409474013794666 0.7198068000728927 0.7259305735872886 0.8731998469125624 0.8488735344597673 0.875009089039672 1.0 11.397170615460492 -10.430476566369919 0.7745308739649127 1.0002314118130176 0.8405425260166006 0.10489075923330138 0.07933986006060478 0.5368273992846474 0.5820168744354042 0.04908114489729578 0.014401355613132215 3.711277542370564e-11 10.430476566369919 -0.15968888579641694 DQVDGVLS(ph)LER ddPTM_A549_MK2206_60min_R1 2 DQVDGVLSLER 11 0 H7C494 H7C494 DNAJB14 1 DQVDGVLS(1)LER;DQVDGVLS(1)LER 53.967 0.019822 1747270.0 495.26 293.56 501.88 415.2 470.84 766.52 172.11 553.4300000000001 721.38 577.76 558.77 True False 578.8477800555313 308.5009501038607 573.0541307130014 516.9240186390361 401.58005971797627 847.632637625204 203.38015917207494 631.8803973082923 557.9885818071457 447.24361472825314 420.0119877325328 1.3781696641100312 0.7345051072692638 1.3643756546251893 1.2307363450021758 0.9561157096632819 2.018115345233869 0.48422465337248694 1.5044341965560257 1.3285063238777783 1.0648353565876354 1.0 8.714286694798188 -4.926947997851241 20.821704467966043 1.1736562286078804 8.170582637792249 0.02356992828314619 0.3865497517135187 1979.3848065884122 574673.4371332136 0.0459581504789186 11992.503164678366 1.1831832208600095e-05 4.926947997851241 6.996926409184368 DQVNLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DQVNLSPK 8 0 Q5FBB7-6;Q5FBB7 Q5FBB7-6 SGOL1 Shugoshin-like 1 1 DQVNLS(1)PK;DQVNLS(1)PK 113.63 0.0013458 91630000.0 25044.0 26669.0 28833.0 26973.0 31047.0 28631.0 27734.0 28821.0 30004.0 30406.0 32429.0 True False 27586.448443581645 28916.49022486363 30789.780766914046 28639.06094987241 28866.365826335445 28397.838628577796 28789.43254662711 28246.142545362894 28743.036221720602 28486.15997087958 28440.438584368345 0.9699726803349623 1.016738547792893 1.082605694549203 1.0069838010730692 1.0149761137017486 0.9985021343582949 1.0122710471297227 0.9931683177659489 1.0106396965874702 1.001607618897142 1.0 14.79565609269997 -6.482739976800043 24.98821104453321 1.0050771783580612 1.026189891498384 0.09384541876117125 0.024928982016626234 815.497224753702 507683.59124624275 0.0033340157838699235 0.007746922716019877 3.290485817014537e-07 6.482739976800043 0.021112713140322814 DQVSGSGANNTEWDTGYDS(ph)DERRDAPSVNK ddPTM_A549_MK2206_60min_R1 1 DQVSGSGANNTEWDTGYDSDERRDAPSVNK 30 2 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 DQVSGSGANNTEWDT(0.179)GYDS(0.821)DERRDAPSVNK 120.31 1.9295000000000002e-21 5557200.0 853.12 1040.5 882.25 1053.5 1260.4 961.78 921.42 976.42 1620.0 1635.5 1583.6 True False 997.1057992185426 1093.4570056651698 1007.3663162938252 1311.6075472934115 1074.9968296417842 1063.5549212221056 1088.8300869463324 1114.830525160839 1253.072586608413 1266.039414095919 1190.3484148634307 0.8376587785290924 0.9186024797543186 0.846278538044175 1.1018686049528557 0.9030942673747494 0.8934820326065018 0.9147154508297929 0.936558163341398 1.0526939599883274 1.0635872642726814 1.0 10.21716819670348 -8.675425090187105 5.716936579927165 1.0247775080476722 0.9202253234143669 0.38478630348747356 0.06695924391773878 0.17153684052703805 8.97074895539923 0.01106978851955934 0.012521195381011959 2.111421355486629e-09 8.675425090187105 -0.10455218463330529 DQWEDR ddPTM_A549_PD325901_60min_R1 1 DQWEDR 6 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 79.597 0.018124 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DRAEAEAR ddPTM_A549_MK2206_60min_R1 2 DRAEAEAR 8 1 P35749-3;P35749-2;P35749;P35749-4;P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35749-3;P35579;P35580-2;P35580-5 MYH11;MYH9;MYH10 Myosin-11;Myosin-9;Myosin-10 0 ; 107.57 0.0018371 9078000.0 1294.27 1482.38 1269.97 1051.8 975.62 269.0 632.12 443.67999999999995 899.74 2062.77 2055.51 False True 1512.71113413656 1557.826810243089 1450.0708423957724 1309.4910472170957 832.1075903959992 297.46540145225134 746.9680217061878 506.57299871301353 695.9503265895387 1596.788824344017 1545.0701378100096 0.9790566118122539 1.0082563710998653 0.9385145741351977 0.8475285459035375 0.5385565160009065 0.19252550041118544 0.48345250058676564 0.3278640796404445 0.45043283768074266 1.03347335843751 1.0 10.59345661481372 -6.5618233918666435 3.8697645783812527 0.629998530632152 0.9706875414240849 0.34038141273826295 0.24280090165963536 0.26820721409370296 8.588842413936359 0.042087643710713045 0.09399964042033908 2.74268927418806e-07 6.5618233918666435 0.3406890107919328 DRAEAEAR ddPTM_A549_PD325901_60min_R1 2 DRAEAEAR 8 1 P35749-3;P35749-2;P35749;P35749-4;P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35749-3;P35579;P35580-2;P35580-5 MYH11;MYH9;MYH10 Myosin-11;Myosin-9;Myosin-10 0 ; 107.15 0.0018702000000000002 15099500.0 1146.13 1071.45 698.5799999999999 679.13 1276.29 1004.4200000000001 760.58 912.0899999999999 884.33 1081.33 1116.06 False True 1262.484273863689 1161.7448517541025 745.989839702799 721.0783176838634 1186.6477933614722 996.2403365343897 789.5242881053458 893.8976494292368 847.1646854404137 1013.054639259068 978.7916952872471 1.2898395848088866 1.186917356724368 0.7621538303753922 0.7367025294102518 1.2123598913589324 1.0178267156649934 0.8066315763678842 0.9132664832908126 0.865520916778718 1.0350053480600545 1.0 9.934858050469987 -7.570303521581774 24.97941191497403 0.9234085417601428 1.0239943019527535 0.09247795195649278 0.17034911302215633 262.675789216227 138354.65743825887 0.026786457560789702 0.039730744950548604 2.6896543897638616e-08 7.570303521581774 0.10058576019261078 DRAPKPPTDGS(ph)TSPTSTPSEDQEALGK ddPTM_A549_PD325901_60min_R1 1 DRAPKPPTDGSTSPTSTPSEDQEALGK 27 2 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;Q8NHM5-5 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 DRAPKPPT(0.037)DGS(0.207)T(0.207)S(0.207)PT(0.11)S(0.11)T(0.11)PS(0.01)EDQEALGK 64.532 9.9671e-05 8899300.0 1634.4 1921.8 1906.9 1800.9 2213.5 1803.7 1770.2 2281.7 2817.0 2043.0 2150.3 True False 1800.3230848183118 2083.756830557687 2036.3137011212268 1912.1375028593488 2058.0313961604484 1789.0112652148282 1837.5659296906083 2236.1897035409756 2698.611286381379 1914.0046313394398 1885.8267318747794 0.9546598605209796 1.1049566724967022 1.0797989373588113 1.0139518496264037 1.0913152101277477 0.9486615259909361 0.9744086763813169 1.1857874669736417 1.4309964116897296 1.014941934478067 1.0 10.880981413194554 -8.329095919553339 6.673896835627772 1.208396705472147 1.0286871511147802 0.18347465655259987 0.11989559413275888 0.2873380267626278 23.72621034895291 0.026142577876913507 0.03167475600383378 4.687098500799713e-09 8.329095919553339 -0.1797095543573668 DRAS(ph)PAAAEEVVPEWAS(ph)CLKSPR ddPTM_A549_PD325901_60min_R1 1 DRASPAAAEEVVPEWASCLKSPR 23 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 2 DRAS(1)PAAAEEVVPEWAS(0.56)CLKS(0.44)PR 50.757 0.0029553 1483600.0 491.16 661.69 644.14 857.04 622.13 373.65 611.71 675.82 624.85 857.43 894.05 True False 541.0222016271184 717.4529385012567 687.855213928485 909.9774143209374 578.4337350319857 370.60711828326276 634.9889587905562 662.3402399294667 598.5897274744077 803.2917234700808 784.0875178499026 0.6900023139134909 0.9150164008076943 0.8772684149018181 1.1605559246960666 0.7377157802717565 0.47266039803761783 0.8098444935481192 0.844727437755562 0.7634220847129917 1.0244924261424786 1.0 9.614870883045418 -5.248996390134511 22.886263319934294 0.8609021316740018 0.6900019601842982 0.0769216814270316 0.16985983526920287 1327.1879203574942 2440933.056467211 0.023864832163259027 0.520347666854003 5.636423408142808e-06 5.248996390134511 -0.1709001714897036 DRAS(ph)PAAAEEVVPEWASCLK ddPTM_A549_MK2206_60min_R1 2 DRASPAAAEEVVPEWASCLK 20 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK 94.08 6.808800000000001e-07 23022000.0 1725.85 2441.2 1915.97 1935.58 2743.4 2334.7 2344.0 1800.19 3366.5 3289.2 2830.0 True False 2017.1312870186152 2565.4466527917466 2187.683356224973 2409.7971868914865 2339.849494160005 2581.756404351568 2769.874458772552 2055.372445350658 2603.9931251958155 2546.1674355513887 2127.2328959734205 0.9482418642720252 1.2060017770728388 1.0284174151151844 1.132831854684517 1.0999498449789116 1.2136688978618666 1.302102117739703 0.9662188137656271 1.2241222529629179 1.196938727475942 1.0 11.05476227727999 -5.240310252965838 23.036175648065914 1.1191400229436366 0.9482413592227981 0.20477771050209748 0.10153157992094515 2400.639368309903 2617193.732434515 0.014671775536969986 0.7879666426088698 5.750289991381482e-06 5.240310252965838 -0.1708986637208385 DRAS(ph)PAAAEEVVPEWASCLK ddPTM_A549_PD325901_60min_R1 2 DRASPAAAEEVVPEWASCLK 20 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK 74.748 0.00010642 38605000.0 1809.7799999999997 2028.9 2166.17 2464.3999999999996 2253.9 1909.3600000000001 1405.12 2605.4 2291.27 1864.01 2548.7 True False 1993.5075333103798 2199.882523425168 2313.179322438393 2616.620390941517 2095.5938395328844 1893.810805206291 1458.5926105111666 2553.433253103239 2194.975890006058 1746.3160904860636 2235.226057540458 0.8918594728194721 0.9841879375036544 1.034874890901957 1.1706289760332913 0.9375310530509748 0.8472569469282919 0.652548141871671 1.1423601852212308 0.9819927978207763 0.7812704601375446 1.0 11.12620502909103 -5.259927682214783 22.061654151401033 0.9807692980756807 0.891859351392423 0.0 0.14544375347149627 81.0728231185097 1182473.2205413166 0.017687429878700454 0.15283986022372328 5.4963238984404574e-06 5.259927682214783 -0.08890994668325769 DRAS(ph)PADLR ddPTM_A549_MK2206_60min_R1 1 DRASPADLR 9 1 E5RGB3;Q9UPQ4-2;Q9UPQ4 E5RGB3 TRIM35 Tripartite motif-containing protein 35 1 DRAS(1)PADLR 67.93 0.0013083 6330800.0 282.21 258.14 316.53 272.09 360.97 256.22 314.57 231.16 403.05 452.85 305.76 True False 329.8401486279358 271.27822339491286 361.4187136259391 338.7520622145841 307.8717911740675 283.333030334929 371.72329713996663 263.9276378978099 311.759818538593 350.55087048201597 229.8313534532981 1.435139913123122 1.1803360129889189 1.572538768951642 1.4739157957550764 1.3395552284237287 1.2327866763074276 1.6173741813494609 1.1483534945611336 1.356472099451578 1.5252526046375485 1.0 7.844431812763478 -10.986708116878793 0.3920159435349102 0.8423948604651679 1.3992280531785743 0.0 0.210569046636871 1.7284363261594342 0.2901283004383506 0.407450889859092 0.04091124740513376 1.0310788610076006e-11 10.986708116878793 0.5568331927134065 DRAS(ph)PADLR ddPTM_A549_PD325901_60min_R1 2 DRASPADLR 9 1 E5RGB3;Q9UPQ4-2;Q9UPQ4 E5RGB3 TRIM35 Tripartite motif-containing protein 35 1 DRAS(1)PADLR;DRAS(1)PADLR 63.091 0.0019195 13957700.0 794.67 1130.48 1144.63 806.8800000000001 1027.4 922.99 1103.12 1332.73 920.85 832.4 960.02 True False 875.3443133948654 1225.7495170199045 1222.3114750193465 856.7191450425623 955.2389683375861 915.4734754563591 1145.0998352504262 1306.1476546435404 882.1498768421344 779.8421219417277 841.9436260681882 1.039670930799317 1.455856994540193 1.4517735358689594 1.017549297265156 1.1345640477124086 1.087333459285807 1.360067111141341 1.551348111919499 1.0477540889070047 0.9262403061158978 1.0 9.717579827918398 -8.963775140748918 24.99971484421978 1.0210677549282814 1.2625231231696796 0.322554837866708 0.17380886104373666 156.07947590206655 107715.14014310704 0.030141707700869793 0.03198796803270418 1.0869882743423594e-09 8.963775140748918 0.24145536824139824 DRDAS(ph)PSKEER ddPTM_A549_MK2206_60min_R1 6 DRDASPSKEER 11 2 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DRDAS(0.988)PS(0.012)KEER;DRDAS(0.968)PS(0.032)KEER;DRDAS(0.829)PS(0.171)KEER;DRDAS(0.978)PS(0.022)KEER;DRDAS(0.999)PS(0.001)KEER;DRDAS(0.991)PS(0.009)KEER 93.478 5.9643999999999993e-05 772411700.0 12170.189999999999 12749.510000000002 11912.880000000001 11105.619999999999 5802.62 3078.73 3002.3300000000004 3165.2100000000005 5426.400000000001 17201.7 18559.4 True False 14224.220539421776 13398.40560143982 13602.305516634047 13826.497398550233 4949.062284684235 3404.519165104426 3547.814498211005 3613.888210549087 4197.329064180177 13315.824022900502 13950.588766618057 1.019614353012719 0.9604186479570281 0.9750345124632012 0.9911049368493494 0.3547565172680523 0.24404125317284078 0.25431288654285783 0.259049153480651 0.30087110547074825 0.9544990713770831 1.0 13.768038389973498 -6.745021910783198 24.17478945546461 0.5482608295914027 0.9838552981617028 0.4579693642773379 0.25801695006530884 172.25865410320162 253649.15644317376 0.0476797049464836 0.09899814834529067 1.7987801617851063e-07 6.745021910783198 0.43559446857030015 DRDAS(ph)PSKEER ddPTM_A549_PD325901_60min_R1 13 DRDASPSKEER 11 2 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DRDAS(0.928)PS(0.072)KEER;DRDAS(0.679)PS(0.321)KEER;DRDAS(0.994)PS(0.006)KEER;DRDAS(0.992)PS(0.008)KEER;DRDAS(0.991)PS(0.009)KEER;DRDAS(0.988)PS(0.012)KEER;DRDAS(0.991)PS(0.009)KEER;DRDAS(0.968)PS(0.032)KEER;DRDAS(0.99)PS(0.01)KEER;DRDAS(0.977)PS(0.023)KEER;DRDAS(0.989)PS(0.011)KEER;DRDAS(0.893)PS(0.107)KEER;DRDAS(0.977)PS(0.023)KEER 121.99 3.0507e-06 2428731100.0 29485.94 27542.250000000007 28948.9 27111.02 31985.670000000002 29283.12 30263.520000000004 30019.470000000005 32090.21 32930.57 33864.66 True False 32479.330922398247 29863.332067034804 30913.54643787734 28785.60613180625 29739.106883771114 29044.64797950748 31415.214814433588 29420.70812103138 30741.570070411308 30851.328190233777 29699.52150576691 1.0935977846003873 1.0055155959747057 1.0408769189050637 0.9692279428211259 1.0013328624838793 0.9779500310760135 1.0577683821718655 0.9906121927021151 1.035086375531069 1.038781994660864 1.0 14.858152067248282 -5.258383712548007 24.4903858049891 1.0124871067471966 1.0935978246582279 0.43434549378272336 0.02684999996852519 147.60226752939278 1182916.1201432797 0.0033955414626331087 0.03291836214563331 5.515898772827494e-06 5.258383712548007 0.0811107179110313 DRDASPS(ph)KEER ddPTM_A549_MK2206_60min_R1 1 DRDASPSKEER 11 2 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DRDAS(0.394)PS(0.606)KEER 69.92 0.00068047 335980000.0 3137.3 2588.3 2611.7 2688.1 1009.6 547.64 854.15 480.42 776.28 4892.6 4459.0 True False 3666.7995403792356 2720.033414476847 2982.0783318385784 3346.6846206733935 861.0891774090325 605.5909013059887 1009.3379987033168 548.5210062245449 600.4538194644313 3787.3582619417275 3351.707237860594 1.09400949431364 0.8115366950166727 0.8897192147790477 0.9985014749705865 0.2569106178732569 0.18068132397283584 0.3011414563008136 0.16365421180838804 0.17914864779410236 1.129978841576632 1.0 11.71068042387465 -6.747286371203279 24.99757692382915 0.4918714482727884 0.9344684323162996 0.352407041333493 0.3170876154801298 268.52361973767006 474273.75524950936 0.052571669914669945 0.10902332140046668 1.789425528357299e-07 6.747286371203279 0.4425969840435112 DRDGYS(ph)YGSR ddPTM_A549_MK2206_60min_R1 1 DRDGYSYGSR 10 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13247-2 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 DRDGYS(0.989)YGS(0.011)R 124.07 6.7578e-06 7997200.0 999.69 1195.1 1118.3 834.29 1082.9 1107.2 1102.6 1039.2 1689.7 1633.1 1573.8 True False 1168.4132319260877 1255.925485315179 1276.891755751075 1038.691087452701 923.6068445089558 1224.363169100122 1302.9281477144266 1186.5097824165255 1306.9856478964407 1264.181575762791 1182.9820253296707 0.9876846874325728 1.0616606663699566 1.0793839030607701 0.878027785048755 0.7807446138089605 1.0349803656221397 1.101393021885797 1.0029820884944314 1.104822913545295 1.0686397161533303 1.0 10.208212437659522 -7.495781172614888 24.910864144679817 1.0508542169862245 0.9598651191627503 0.24762600367747378 0.08249711469837835 923.7377605725331 849195.6447484482 0.013522530749332854 0.02157764274645083 3.19314637625838e-08 7.495781172614888 -0.0909890978234742 DRDGYS(ph)YGSR ddPTM_A549_PD325901_60min_R1 2 DRDGYSYGSR 10 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13247-2 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 DRDGYS(1)YGSR;DRDGYS(1)YGSR 160.84 2.4975999999999997e-09 23160000.0 2655.1000000000004 2733.55 2771.1 2971.1000000000004 3001.1 3079.6 2580.4 2697.9 3125.6000000000004 2996.1499999999996 3377.3 True False 2924.6437974186883 2963.91585189456 2959.163509977994 3154.6180991423225 2790.313089232944 3054.5207586381275 2678.598534049059 2644.0882680383947 2994.2419015667892 2806.9725776738414 2961.91351046863 0.9874170150754857 1.0006760296743482 0.9990715459850815 1.0650608425913162 0.9420643375881237 1.0312660203757418 0.9043473162135832 0.8926959746437871 1.0109146978748358 0.9476889071044231 1.0 11.532313798401686 -4.10515350705626 15.819019029574875 0.9926388974855639 0.995534890060459 0.0 0.05189211262186331 0.0 0.0 0.0065045462440203854 0.0 7.84958131866676e-05 4.10515350705626 0.0028959925748951454 DRDGYSYGS(ph)R ddPTM_A549_MK2206_60min_R1 1 DRDGYSYGSR 10 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13247-2 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 DRDGYS(0.003)YGS(0.997)R 51.875 0.006776300000000001 2257200.0 688.03 483.47 502.72 495.95 633.47 353.89 354.82 549.93 794.91 775.48 804.49 True False 804.1526432815239 508.0765579326667 574.0132553439868 617.4577722640413 540.287402152635 391.33840490682996 419.2862011355277 627.8842615899924 614.8641542104281 600.2985294057492 604.7129302055325 1.329808911160879 0.8401946321206979 0.9492326468840159 1.02107585504113 0.8934609715869639 0.6471474072396965 0.6933640413361408 1.0383179029702314 1.016786847936996 0.992700005937887 1.0 9.240106617356815 -5.2508828887998416 24.453028996857153 0.9498928513751139 1.3298092036082845 0.4260114318317052 0.1329335242389449 961.906009075793 2228097.9204485645 0.020069583970175137 0.38988834292560487 5.611992877905298e-06 5.2508828887998416 0.37991635223317055 DRDGYSYGS(ph)R ddPTM_A549_PD325901_60min_R1 1 DRDGYSYGSR 10 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13247-2 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 DRDGYS(0.026)YGS(0.973)R 42.208999999999996 0.022438999999999997 2569800.0 754.16 576.35 448.39 523.3 526.68 647.42 422.46 488.92 619.44 694.53 807.43 True False 830.7217680167518 624.9210372005007 478.8204417881105 555.6230524994708 489.68781374736164 642.1476261714172 438.53694647898226 479.16810704968 593.4070909606259 650.6772572707686 708.1212287204819 1.1731349581452306 0.8825057233910113 0.6761842780131031 0.7846439705012613 0.6915310456546941 0.9068328982760852 0.619296426505082 0.6766752465753614 0.8380021201071245 0.9188783373243732 1.0 9.467852557289348 -10.037814094694978 0.9786487298725153 0.9815290278445952 0.7960200321983993 0.13163664133024777 0.14758911851887022 0.5698212708924189 1.0999498205930935 0.05532802987090097 0.028102302405065883 9.16612773970875e-11 10.037814094694978 -0.18550899564619583 DRDNQDREENDKDPER ddPTM_A549_MK2206_60min_R1 2 DRDNQDREENDKDPER 16 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 80.738 7.7894e-05 37990000.0 2556.5 2680.0 2575.1 2015.27 3314.8999999999996 2755.7 2812.29 2775.74 3699.1000000000004 3552.9 3270.7 False True 2987.9746995759137 2816.4005527944796 2940.2879014885007 2509.0112404689094 2827.2826012214755 3047.3063449143833 3323.246690128607 3169.2096453472354 2861.2597562488772 2750.2974224037844 2458.4949232721797 1.21536744749467 1.145579161516404 1.1959707029108158 1.0205476597566019 1.1500054665390365 1.2395007677536767 1.351740310167275 1.2890852917154356 1.1638257737138746 1.1186915199089469 1.0 11.263559660696103 -10.15079682382277 0.93691430412068 1.0144017890730186 1.1949789469989829 0.24206908361675195 0.08691633887984003 0.391054984809453 0.6826705560618949 0.03827574440699121 0.017282163638269753 7.066480684192555e-11 10.15079682382277 0.1805771579259643 DRDNQDREENDKDPER ddPTM_A549_PD325901_60min_R1 1 DRDNQDREENDKDPER 16 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 42.059 0.023541 11554000.0 1363.0 1334.7 1696.1 1481.9 1257.8 1334.0 1325.4 1331.8 1409.1 1519.8 1506.9 False True 1501.3707566124335 1447.1798531300578 1811.2075454778508 1573.4335973609125 1169.4564671744356 1323.1363462862903 1375.8388222867084 1305.2362042231111 1349.880427277246 1423.83956862931 1321.5608530261381 1.1360587393115973 1.0950535117745617 1.370506353400609 1.1905873223756824 0.8849054998084949 1.0011921458300952 1.0410711085579476 0.9876474482687297 1.0214288840247205 1.0773923617432914 1.0 10.368027141981898 -6.678741808422642 8.789448615629787 1.0031572901487693 1.2042622274352703 0.597692344520401 0.07736365895846783 0.1376832418766445 13.233268750037226 0.010152511634974113 0.021154785409940532 2.0953577927651266e-07 6.678741808422642 0.20110493728650103 DRDT(ph)PHSDFR ddPTM_A549_MK2206_60min_R1 1 DRDTPHSDFR 10 1 E9PGM9;P78332;F8WCA5;P78332-3 E9PGM9 RBM6 RNA-binding protein 6 1 DRDT(0.999)PHS(0.001)DFR 58.781000000000006 0.0041613 3927300.0 742.3 756.58 803.56 415.21 916.74 695.04 524.44 640.76 874.0 1186.7 881.51 True False 867.5820925074125 795.0866903855399 917.5168910411638 516.936468639485 781.8887603981344 768.5886714697875 619.7239595386845 731.5896922452006 676.0403954912056 918.6236458010562 662.6067385616711 1.309346920302507 1.1999375257055862 1.3847080593125711 0.7801557674490386 1.180019331067158 1.159946959093976 0.9352817040223997 1.1041084396957261 1.0202739515729873 1.3863783634243205 1.0 9.37200906515271 -6.240202788418148 24.999962722121193 1.0218361373336327 1.288191514034054 0.25826522833259313 0.15599779709310482 441.12189770437385 519293.1730998558 0.014013704815841015 0.03703726461514775 5.751713055224256e-07 6.240202788418148 0.2663553767004214 DRDT(ph)PHSDFR ddPTM_A549_PD325901_60min_R1 2 DRDTPHSDFR 10 1 E9PGM9;P78332;F8WCA5;P78332-3 E9PGM9 RBM6 RNA-binding protein 6 1 DRDT(0.989)PHS(0.011)DFR;DRDT(0.967)PHS(0.033)DFR 49.12 0.011802 8388800.0 2026.83 1646.29 1566.87 1938.15 1741.72 1509.13 1598.46 1386.51 1777.55 1904.58 2010.57 True False 2232.592289526616 1785.0286359552567 1673.2072205547329 2057.865123641983 1619.387595807805 1496.8401456304568 1659.2902700108748 1358.8549703539468 1702.8457550966361 1784.3244937623433 1763.2826360533306 1.266156794082495 1.0123326796608167 0.9489160650386661 1.1670648151155176 0.9183936611730046 0.848894054206058 0.9410234276024989 0.770639341969252 0.9657247909546892 1.0119333436845437 1.0 10.78404802701791 -2.032434183458475 0.9506062412771331 0.9589620081106988 199.99999962830694 0.4772049590933548 0.0941197250790591 794.7877970479742 1.3896548368771613 0.014293337654729711 343957.4959777889 0.009280381219660228 2.032434183458475 199.04103762019625 DREDS(ph)PER ddPTM_A549_MK2206_60min_R1 4 DREDSPER 8 1 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 DREDS(1)PER;DREDS(1)PER;DREDS(1)PER;DREDS(1)PER 102.05 0.00062688 110131000.0 6156.849999999999 5623.360000000001 4743.2 4488.08 1507.48 75.58500000000001 301.28 438.724 1506.0200000000002 7171.1 8214.64 True False 7195.975759469568 5909.56500468745 5415.85708296387 5587.659801477569 1285.731688946681 83.58335453073765 356.01867616851285 500.91447053590025 1164.9088746197544 5551.143529454749 6174.718175469651 1.165393392051005 0.9570582554138944 0.8771019063638379 0.9049254788138682 0.2082251614421071 0.013536383711047715 0.057657477807306394 0.08112345475553635 0.1886578207322233 0.8990116425892631 1.0 12.59215757583214 -6.652135128974219 6.57104542682684 0.4548908071483108 0.9775355513321703 0.4425068271110949 0.32551923354406775 0.23964901698414862 13.098557179126031 0.06050216402694961 0.12659380321135413 2.2277418885310003e-07 6.652135128974219 0.5226447441838595 DREDS(ph)PER ddPTM_A549_PD325901_60min_R1 4 DREDSPER 8 1 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 DREDS(1)PER;DREDS(1)PER;DREDS(1)PER;DREDS(1)PER 169.81 5.2567e-06 317774000.0 5904.759999999999 5840.92 6243.0 6809.2699999999995 7452.640000000001 5727.370000000001 5440.75 5878.650000000001 6552.249999999999 6659.119999999999 6701.71 True False 6504.206888345437 6333.15482711052 6666.68752220873 7229.8631429257985 6929.192276612245 5680.728197623472 5647.80071854264 5761.395714038291 6276.88171856315 6238.662026747471 5877.442155639925 1.1066390303993168 1.0775358837063669 1.1342838169511298 1.2301036660970124 1.1789469114490685 0.9665306858311334 0.960928337358978 0.9802556216584323 1.067961462205107 1.061458685860638 1.0 12.520972719955598 -7.256265395527117 24.99665682894039 1.0184923791571352 1.1458028520272638 0.6613121939584681 0.049214726221061655 250.89411962907693 1212124.2421111017 0.008240446674531764 0.013996039190442159 5.5428688706083726e-08 7.256265395527117 0.12731047287012864 DREDS(ph)PERCSDS(ph)DEEK ddPTM_A549_MK2206_60min_R1 1 DREDSPERCSDSDEEK 16 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 2 DREDS(0.99)PERCS(0.416)DS(0.594)DEEK 46.953 0.022462 6105500.0 359.15 474.5 421.96 529.29 720.54 675.87 455.84 531.81 599.19 711.6 501.0 True False 419.76573962553863 498.6500232466346 481.80027296496786 658.9660737607306 614.5495204935662 747.390114793804 538.6602275114672 607.1956960998193 463.47442170981157 550.8490657723364 376.5878731034218 1.114655488415738 1.3241266085849 1.2793833986062841 1.7498334939207127 1.6318887685605141 1.984636702808933 1.4303706146255422 1.6123612560754603 1.230720516543368 1.4627371328578536 1.0 8.556842732755953 -9.07971251274014 1.5790959698176106 1.074216244924457 1.5272671987922977 0.12383592250328446 0.2590029570666382 0.25484874445276023 1.2995728970729885 0.05108666329133772 0.04864484577467688 8.323145509530537e-10 9.07971251274014 0.45305095386784067 DREEALHQFR ddPTM_A549_MK2206_60min_R1 2 DREEALHQFR 10 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 ; 80.688 0.0041757 30439000.0 3703.3999999999996 4393.2 3716.3999999999996 3126.8999999999996 5817.3 3640.0 3027.1400000000003 4251.1 5572.0 5194.4 4975.4 False True 4328.443380563047 4616.7951151256375 4243.441403087984 3892.9906403718765 4961.582876130711 4025.1823839635504 3577.13215406516 4853.7064434477425 4309.950896655602 4020.9814323325236 3739.8708659456406 1.1573777640230323 1.2344798204571865 1.1346491777905316 1.04094252981313 1.3266722445712456 1.0762891362415445 0.956485472971182 1.2978272826595216 1.1524330788800685 1.0751658483576554 1.0 11.868772740797407 -10.584425305717033 0.7564488767465228 0.9936174292540343 1.1528952779104964 0.13734143091322892 0.10471520451682352 0.8548907464659433 0.826765096003741 0.0810316472677981 0.019428212605094645 2.603602586327496e-11 10.584425305717033 0.1592778486564621 DREEALHQFR ddPTM_A549_PD325901_60min_R1 2 DREEALHQFR 10 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 ; 64.82 0.020907 27946000.0 13193.300000000001 12950.800000000001 15385.5 14034.2 16251.8 13833.4 14448.6 14422.7 13937.0 16130.0 16490.6 False True 14532.674103605877 14042.209366836561 16429.652550527375 14901.060660019242 15110.329633666313 13720.74537684915 14998.449379577298 14135.027934110723 13351.276357223045 15111.549047236973 14462.360742526267 1.0048618176749564 0.9709486311972388 1.136028401104415 1.0303339078109832 1.0448038119554512 0.948721002132355 1.0370678512723495 0.9773665714579344 0.9231740650725091 1.0448881283123979 1.0 13.820015447298186 -7.540548757225882 1.1775230644188661 0.9656208968047469 1.0385766538132717 0.06739359085263985 0.05326329954384371 0.45503805921820567 1.2643973899747134 0.008694290541564733 0.015965912711431218 2.8803896570111282e-08 7.540548757225882 0.07295575700852475 DREKDS(ph)REER ddPTM_A549_PD325901_60min_R1 1 DREKDSREER 10 3 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DREKDS(1)REER 52.576 0.0067462 12219000.0 1197.8 1004.7 904.06 770.11 970.24 759.43 666.73 758.64 928.26 1194.9 1400.3 True False 1319.3997742262452 1089.3695949949563 965.4149481544164 817.677945653292 902.0936895462906 753.2454538682139 692.1027749986555 743.5083300584334 889.2484603111038 1119.45381007709 1228.0719772330615 1.0743668112995723 0.8870567973136134 0.7861224472604357 0.6658224931535217 0.7345609266150471 0.6133561125344889 0.5635685756449024 0.6054273233508786 0.7241012552982826 0.9115539079389334 1.0 10.262179404127567 -5.362062684683088 2.359881117240674 0.7855532740073756 1.1097378959672783 0.3235719189857059 0.13288356542899538 0.582105207909241 4.480382935939162 0.024309929174092693 0.34966895797324593 4.344475128748147e-06 5.362062684683088 0.3241846219599027 DREPHGYS(ph)PER ddPTM_A549_MK2206_60min_R1 1 DREPHGYSPER 11 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 DREPHGYS(1)PER 78.191 0.00029961 39266000.0 673.82 940.06 514.04 588.2 699.28 662.69 563.17 578.73 831.41 953.87 1124.3 True False 787.5443426826681 987.9050386790954 586.9386015615504 732.3090264053011 596.4168383306143 732.8154159419803 665.4906992094444 660.7667497862927 643.0969624889503 738.3901045085133 845.1052808985572 0.931889032624802 1.1689727434062493 0.694515363739638 0.8665299376980278 0.7057308146228536 0.8671291405998731 0.7874648452106017 0.7818750689662396 0.7609666831157157 0.8737255833065212 1.0 9.722987269357649 -4.392226536641145 23.959809117683434 0.8673814566312563 1.006290646411299 0.0 0.13272766842597045 0.0 0.0 0.01858747648789351 0.0 4.052970692868194e-05 4.392226536641145 0.13890918978004274 DREPHGYS(ph)PER ddPTM_A549_PD325901_60min_R1 2 DREPHGYSPER 11 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 DREPHGYS(1)PER;DREPHGY(0.001)S(0.999)PER 127.03 7.9393e-08 120248000.0 2414.35 2442.0 1948.3 2358.19 2768.9 2288.38 2005.58 2114.59 2242.18 2476.6 2412.6 True False 2659.4530346494707 2647.795910199746 2080.523354079653 2503.8500404619285 2574.4220161864337 2269.7441919899716 2081.9034443954865 2072.4128435862362 2147.948971990983 2320.227053340799 2115.8654947314767 1.256910253166627 1.251400864938145 0.9832966033333281 1.1833691918019065 1.2167229072910195 1.0727261244354398 0.9839488613900288 0.9794634152060053 1.0151632877134178 1.0965853260134846 1.0 11.04703220311043 -7.488709611014154 3.9882208446383434 1.0036239557317819 1.1712222303788855 0.5186473142066848 0.07465242293707108 0.12427238702365563 4.287532807901984 0.010464622828106415 0.01659801944217366 3.245565580464153e-08 7.488709611014154 0.16759827464710364 DREREPEAAS(ph)SRGSPVR ddPTM_A549_MK2206_60min_R1 1 DREREPEAASSRGSPVR 17 3 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 DREREPEAAS(0.362)S(0.362)RGS(0.276)PVR 53.059 0.0043988 273180000.0 273.33 211.48 393.45 176.83 437.05 172.68 178.13 162.15 431.96 425.58 579.42 True False 319.4614217230919 222.24342869588665 449.2471262633103 220.15335793820032 372.7605239566342 190.95288298429296 210.49391524793285 185.1352590635485 334.12174969837656 329.44118242185345 435.53402282152615 0.7334936078093751 0.5102779967822582 1.031485722637571 0.505479127697023 0.8558700455633167 0.4384339063736978 0.48330073936425716 0.42507645640215236 0.7671541881707219 0.7564074565004819 1.0 8.76664161270601 -9.59427415728605 1.1870008194358959 0.9503488398301806 0.6309516373593652 0.17375777723004937 0.19270576147252394 0.3237593697617848 0.9386487241181907 0.048626381016116146 0.035253144200310706 2.545223021181274e-10 9.59427415728605 -0.3193972024708154 DREREPEAASSRGS(ph)PVR ddPTM_A549_MK2206_60min_R1 4 DREREPEAASSRGSPVR 17 3 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 DREREPEAAS(0.006)S(0.213)RGS(0.781)PVR;DREREPEAAS(0.206)S(0.206)RGS(0.588)PVR;DREREPEAASSRGS(1)PVR;DREREPEAAS(0.001)S(0.001)RGS(0.999)PVR 178.73 2.9846999999999998e-31 512996000.0 1660.15 2291.07 2345.77 1612.5400000000002 2262.2400000000002 1645.2200000000003 1350.8 862.1199999999999 2475.9700000000003 3421.5899999999997 3600.3999999999996 True False 1940.3427332293957 2407.675677048823 2678.4354590791363 2007.6123723896706 1929.4674927712074 1819.316088391351 1596.2228749615886 984.328150131769 1915.1667483116237 2648.65044260254 2706.3213140150892 0.7169668742514206 0.8896488619367977 0.9896960295174332 0.7418233607343481 0.712948415540746 0.6722468906296347 0.5898127715638605 0.3637144433051163 0.7076642150337606 0.9786903088284853 1.0 11.402117421321904 -14.174609825114082 16.487513145329334 0.7915089283522525 0.7901262945795077 0.0 0.1872349526119741 0.0 0.0 0.0 0.02762525469283114 6.6894463481809985e-15 14.174609825114082 -0.0013826337727448346 DREREPEAASSRGS(ph)PVR ddPTM_A549_PD325901_60min_R1 6 DREREPEAASSRGSPVR 17 3 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 DREREPEAAS(0.125)S(0.021)RGS(0.853)PVR;DREREPEAASS(0.001)RGS(0.999)PVR;DREREPEAAS(0.014)S(0.014)RGS(0.972)PVR;DREREPEAASSRGS(1)PVR;DREREPEAAS(0.202)S(0.056)RGS(0.743)PVR;DREREPEAAS(0.256)S(0.256)RGS(0.487)PVR 169.84 1.533e-30 942694000.0 4490.879999999999 3614.3500000000004 4363.49 4179.47 4328.33 6274.32 4485.32 5323.77 4814.53 6183.930000000001 6394.209999999999 True False 4946.790831588878 3918.9439590624274 4659.622671196953 4437.626369634939 4024.323032727875 6223.2240181641655 4656.011307061278 5217.583230933233 4612.192047079072 5793.475604443902 5607.762706236818 0.8821326954664428 0.6988426872456412 0.830923652674289 0.7913363318136692 0.7176343300425534 1.109751668208579 0.8302796589240438 0.9304215431816262 0.8224656228676551 1.0331171106795476 1.0 12.45320958733116 -7.209647083925995 24.99949917765121 0.9203428269042421 0.7824284287944694 0.42790926474809177 0.09356035890453622 307.7614366832352 148552.55003796675 0.013622169275162943 0.02359427520991472 6.170962624942249e-08 7.209647083925995 -0.13791439810977268 DRES(ph)RSPFLKPDER ddPTM_A549_MK2206_60min_R1 1 DRESRSPFLKPDER 14 3 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 DRES(0.749)RS(0.251)PFLKPDER 105.2 6.4284e-06 130770000.0 4317.0 4282.1 4141.4 3535.9 5714.1 4650.2 3985.7 4075.1 6573.5 6822.1 7526.8 True False 5045.604059483363 4500.0405996721 4728.7127937650885 4402.195658732582 4873.563459422499 5142.281077447061 4709.85009826355 4652.757904470342 5084.612745722469 5280.982871845776 5657.687830887895 0.8918137957236014 0.795385099740627 0.8358030586185564 0.7780909428581392 0.8614055078853055 0.9089015214612949 0.8324690649332634 0.8223779825865996 0.8987086063609329 0.9334171537380491 1.0 12.46599686131594 -9.801004168007877 0.46005017850647273 1.010890387549891 0.830169585620132 0.5458187025330912 0.041967621491985456 0.4139924320153857 0.18065734554439258 0.03150838624784034 0.011897266728871491 1.5812328638008997e-10 9.801004168007877 -0.18072080192975892 DRES(ph)RSPFLKPDER ddPTM_A549_PD325901_60min_R1 2 DRESRSPFLKPDER 14 3 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 DRES(0.5)RS(0.5)PFLKPDER;DRES(0.587)RS(0.413)PFLKPDER 138.46 5.920900000000001e-10 336059000.0 6678.3 6771.200000000001 7234.7 7402.0 6393.9 7125.6 6657.6 7496.700000000001 7836.900000000001 8536.1 8119.599999999999 True False 7356.276099695384 7341.832787528471 7725.69024778528 7859.2047288383 5944.814521757529 7067.571476085147 6910.958611178511 7347.172437452623 7507.542346553861 7997.129189220063 7120.940674385183 1.0330483620172162 1.0310200749091847 1.0849255177164232 1.1036750744334571 0.8348355636695148 0.9925053162580035 0.9705120330573739 1.0317699266729212 1.0542908149142889 1.1230439284498785 1.0 12.797852118077069 DRESRS(ph)PFLKPDER ddPTM_A549_MK2206_60min_R1 3 DRESRSPFLKPDER 14 3 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 DRES(0.374)RS(0.626)PFLKPDER;DRES(0.039)RS(0.961)PFLKPDER;DRES(0.061)RS(0.939)PFLKPDER 156.73 1.6484000000000003e-19 228092000.0 8819.1 8955.2 8992.1 8528.2 11775.0 8994.2 9745.3 9261.199999999999 13721.8 14591.2 15874.4 True False 10307.54847370621 9410.981429248179 10267.314993194352 10617.609382845449 10042.913098248177 9945.960274133244 11515.89486479357 10574.003461235496 10613.834209211926 11295.037785971497 11932.34836884823 0.8638323450743457 0.7886948267297843 0.8604605460564008 0.8898172475893203 0.8416543657464108 0.8335291567667562 0.9650987809623549 0.8861628184474597 0.8895008661431183 0.9465896768032218 1.0 13.542590382907877 -14.999999998691822 0.11213525846473682 1.4497549275779102 0.7888789066934011 0.5633223326686556 0.03896637585681438 36.713240203846624 0.2905475407285275 3.7636387758383787 0.1686202215132709 1.0000000030121923e-15 14.999999998691822 -0.6608760208845091 DRESRS(ph)PFLKPDER ddPTM_A549_PD325901_60min_R1 2 DRESRSPFLKPDER 14 3 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 DRES(0.103)RS(0.897)PFLKPDER;DRES(0.138)RS(0.862)PFLKPDER 138.07 7.015700000000001e-10 317520000.0 9583.3 9235.5 9372.7 9374.7 10327.9 10282.4 8940.1 10944.8 11638.3 11163.4 10893.2 True False 10556.189561147417 10013.807996990068 10008.787784623697 9953.75392751154 9602.503933320757 10198.663543518853 9280.320397710435 10726.497377970496 11149.182724278451 10458.541018842243 9553.405457684206 1.1049661409122575 1.0481925048973548 1.0476670155952825 1.0419063622496327 1.005139368977275 1.0675422066709874 0.9714148989924721 1.1227930632152456 1.1670375316595292 1.0947448075104986 1.0 13.221799380234062 -8.293448836410903 24.97408410559668 1.084376364674573 1.0411896934399294 0.21312475844084255 0.04913537881625548 1313.8945266699686 1025108.6901698343 0.011072212498683943 0.013386057626728697 5.088047576482435e-09 8.293448836410903 -0.04318667123464359 DRFGLEGDEESTMLEES(ph)VSPK ddPTM_A549_MK2206_60min_R1 1 DRFGLEGDEESTMLEESVSPK 21 1 Q9Y4G6 Q9Y4G6 TLN2 Talin-2 1 DRFGLEGDEEST(0.001)MLEES(0.594)VS(0.405)PK 84.946 1.0722999999999999e-05 2318600.0 1082.2 817.17 946.5 925.09 1389.4 1104.7 1056.7 1215.0 1250.7 1271.8 1335.8 True False 1264.8489027502644 858.7604625847256 1080.7279324138356 1151.7370915288677 1185.0211005270512 1221.5986207594885 1248.688711853649 1387.2299707814464 967.4184469574949 984.4994966965388 1004.0839937955104 1.2597042782935357 0.8552675551958046 1.0763321983936875 1.1470525360883583 1.180201166286483 1.2166299117484753 1.243609817076672 1.3815875756943563 0.963483585970316 0.9804951605443477 1.0 9.97166424355608 DRFGLEGDEESTMLEES(ph)VSPKK ddPTM_A549_PD325901_60min_R1 1 DRFGLEGDEESTMLEESVSPKK 22 2 Q9Y4G6 Q9Y4G6 TLN2 Talin-2 1 DRFGLEGDEESTMLEES(0.555)VS(0.445)PKK 75.226 7.379e-05 3214900.0 1524.6 1660.7 1234.9 1131.9 1778.4 1439.1 1327.7 1802.4 1588.0 1709.5 1734.5 True False 1679.3762696488004 1800.6530172271566 1318.707740056953 1201.8148922685862 1653.4913191469368 1427.3804467320833 1378.226350045318 1766.4497180445544 1521.261882418754 1601.561878254905 1521.1674959014108 1.10400483455876 1.183730931721052 0.8669050210512916 0.790060854906985 1.0869883320555136 0.9383453502510246 0.9060319483283535 1.1612460316198083 1.0000620487340135 1.0528504471533255 1.0 10.570963301762657 -5.742468391711497 24.999986759075906 0.985542025911574 1.1438679582811124 0.2877202851252847 0.10005849376459826 232.68694565146464 306630.22089505626 0.012997364740025552 0.050170906855819576 1.8093875940911612e-06 5.742468391711497 0.1583259323695384 DRFGLEGDEESTMLEESVS(ph)PK ddPTM_A549_MK2206_60min_R1 1 DRFGLEGDEESTMLEESVSPK 21 1 Q9Y4G6 Q9Y4G6 TLN2 Talin-2 1 DRFGLEGDEESTMLEES(0.039)VS(0.961)PK 75.71 9.146399999999999e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DRFGLEGDEESTMLEESVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DRFGLEGDEESTMLEESVSPK 21 1 Q9Y4G6 Q9Y4G6 TLN2 Talin-2 1 DRFGLEGDEESTMLEES(0.148)VS(0.852)PK;DRFGLEGDEESTMLEES(0.213)VS(0.787)PK 112.13 3.5650999999999997e-11 13113500.0 5399.2 5087.0 4876.2 4859.1 6141.2 5762.0 5084.2 5199.9 5275.5 6076.5 6586.799999999999 True False 5947.322809319035 5515.699342828053 5207.128254972642 5159.235571183218 5709.863297989855 5715.07618238501 5277.682013180994 5096.183915257365 5053.7890810454255 5692.828752978019 5776.665357165414 1.0295425546750663 0.9548241073003031 0.9014072882919703 0.8931165736965648 0.9884358786522578 0.9893382823874316 0.9136208672075009 0.8822016856032736 0.8748627051377784 0.9854870242598693 1.0 12.496021206284626 -7.791474364687543 24.997569357355292 0.9322090515145292 0.9548990512512766 0.0676671788723534 0.05056939617317406 709.2417713424992 590286.3613871364 0.009616677458843524 0.013288244576798022 1.6163136302247773e-08 7.791474364687543 0.022689999736747457 DRFGLEGDEESTMLEESVS(ph)PKK ddPTM_A549_PD325901_60min_R1 1 DRFGLEGDEESTMLEESVSPKK 22 2 Q9Y4G6 Q9Y4G6 TLN2 Talin-2 1 DRFGLEGDEESTMLEES(0.059)VS(0.941)PKK 65.275 0.00039557 4444500.0 1483.0 1810.7 1628.3 1768.9 1757.4 1625.6 1720.0 1984.9 1796.1 1661.9 2080.5 True False 1633.5530682731016 1963.2940436522022 1738.8062297633314 1878.1609355366204 1633.9662867008692 1612.3616525659625 1785.4555412201137 1945.3096123760736 1720.6161631059983 1556.967350378371 1824.6116893761234 0.8952880647342838 1.076006503237682 0.9529733037925835 1.0293482972143002 0.8955145339771224 0.8836738589114629 0.9785400102476609 1.0661499231330802 0.9430040227870712 0.8533143569362607 1.0 10.833373749521034 -6.0076007903932584 0.0021805077205471124 1.9329249252469693 4.294684657341638e-05 0.0 0.074004829664665 566446.2584149588 230.07701170482665 100641.85537473741 103318.44397968256 9.826507944548172e-07 6.0076007903932584 -1.9328819784003959 DRHDT(ph)PDPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 DRHDTPDPSPR 11 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 DRHDT(1)PDPS(1)PR;DRHDT(1)PDPS(1)PR 48.625 0.015933000000000003 5698900.0 325.27 137.22 154.03 116.74 107.89 198.0 219.57299999999998 123.19 0.0 189.02 185.5 True False 380.16762391201115 144.20391188599191 175.8737701317518 145.34130524065776 92.0195239210188 218.95222857823714 259.46657190105174 140.6525597535525 0.0 146.3202507199086 139.43523046044865 2.726481841472964 1.0341999752128348 1.2613295043940784 1.0423571199380948 0.6599445751059342 1.5702791027432899 1.860839409410597 1.0087304283794272 0.0 1.0493779099925031 1.0 7.123451316181549 -2.0000000000000004 0.3944215533468221 0.661689284343993 26.283721712384807 0.3139774440989034 0.546619313652872 48.75998759300346 0.5714984636875162 0.144103842050261 978.9470285645656 0.00999999999999999 2.0000000000000004 25.622032428040814 DRHDT(ph)PDPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 DRHDTPDPSPR 11 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 DRHDT(1)PDPS(1)PR 46.964 0.017605000000000003 3712700.0 383.05 310.52 332.58 296.84 289.11 248.68 284.63 379.06 299.8 318.3 478.43 True False 421.93695401349413 336.68861017003485 355.1508787660066 315.17513262744677 268.80391097535477 246.65483252959118 295.4617504055123 371.4993509331827 287.20044858258365 298.20248367858204 419.58614301764885 1.0056026897812649 0.8024302417343484 0.8464313816747472 0.7511571530001402 0.6406405822702496 0.5878526653803633 0.7041742329252385 0.8853947088466086 0.6844850654910767 0.7107062247907431 1.0 8.712823222957237 -10.886117140863604 1.0325067598173883 1.0058710801556574 0.7570943314676036 0.0 0.14032585172578363 0.4892998394123542 0.8891484099221009 0.09208345720557981 0.020060824275624407 1.2998189347364138e-11 10.886117140863604 -0.24877674868805377 DRICS(ph)DEEEDEEK ddPTM_A549_MK2206_60min_R1 2 DRICSDEEEDEEK 13 1 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 DRICS(1)DEEEDEEK;DRICS(1)DEEEDEEK 107.34 2.3458e-05 21904000.0 2213.89 2534.2 2269.1 1961.05 2724.8999999999996 2836.0 2505.5 2352.2799999999997 2473.5 2619.53 3552.5 True False 2587.5405075861995 2663.17995555663 2590.892500200985 2441.5073380348795 2324.0708196532014 3136.103637615559 2960.7169182826888 2685.722893555373 1913.2561993678453 2027.7763536574041 2670.3162059878355 0.9690015368906415 0.9973275635240488 0.9702568161745215 0.9143139425061788 0.8703354360962107 1.1744315637913052 1.1087514323748129 1.0057696116785684 0.7164905021651061 0.7593768667210199 1.0 11.382794873690887 -8.639677698957426 20.594664614961697 0.8658373000293297 1.0022328350670135 0.3430573133197248 0.10441639101725567 3.0175006876249566 523.0978702401628 0.021715037602760334 0.024622521176465403 2.292568395248513e-09 8.639677698957426 0.13639553503768387 DRICS(ph)DEEEDEEK ddPTM_A549_PD325901_60min_R1 2 DRICSDEEEDEEK 13 1 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 DRICS(1)DEEEDEEK;DRICS(1)DEEEDEEK 126.63 2.2718000000000003e-07 25816000.0 2842.2 3162.2 3314.0 2849.0 2728.2 2783.9 2825.2 3039.8999999999996 2087.26 2669.77 3335.0 True False 3130.738051682948 3428.689691741864 3538.907968700902 3024.976259451543 2536.580643779054 2761.2288413991023 2932.7145320087616 2979.266809744583 1999.5397208421718 2501.200266574201 2924.8161423068345 1.070405078253466 1.1722752901102422 1.2099591210234932 1.0342449276369594 0.867261571449898 0.944069201977698 1.0027004739161818 1.0186167830005215 0.6836462955463289 0.8551649556342632 1.0 11.514130222548221 -6.577714514760754 3.2572759773458575 0.8800675056211472 1.1518624935918875 0.5305247458336257 0.09694909549643344 0.17087818445590403 3.6934285270654024 0.019193952711286308 0.043734843697702204 2.6441463264730924e-07 6.577714514760754 0.2717949879707403 DRICS(ph)DEEEDEEKGGR ddPTM_A549_MK2206_60min_R1 4 DRICSDEEEDEEKGGR 16 2 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 DRICS(1)DEEEDEEKGGR;DRICS(1)DEEEDEEKGGR;DRICS(1)DEEEDEEKGGR;DRICS(1)DEEEDEEKGGR 76.027 9.810899999999999e-05 31945000.0 2875.21 3246.2099999999996 3202.71 2332.24 3157.1099999999997 3189.02 2860.92 2782.6600000000003 3458.98 4205.43 3290.74 True False 3360.475155864526 3411.428223316029 3656.9024367893426 2903.638904698232 2692.7033011983262 3526.479979699846 3380.7121316516927 3177.1105765388447 2675.52655285603 3255.420442202018 2473.5584381963176 1.3585590313827132 1.379158127270117 1.4783974295169278 1.1738711565737348 1.088594981067763 1.4256707766610532 1.3667403524603439 1.284429155777515 1.081650836115675 1.316087945177403 1.0 11.272372268452182 -8.79233630894487 2.7042800119116985 1.0331269252604698 1.3227157500123627 0.199440690521834 0.13478191048181748 0.1384439646648022 1.984994618591174 0.02014232922600174 0.021642062057280052 1.613108913818523e-09 8.79233630894487 0.28958882475189296 DRICS(ph)DEEEDEEKGGR ddPTM_A549_PD325901_60min_R1 4 DRICSDEEEDEEKGGR 16 2 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 DRICS(1)DEEEDEEKGGR;DRICS(1)DEEEDEEKGGR;DRICS(1)DEEEDEEKGGR;DRICS(1)DEEEDEEKGGR 107.45 1.4766e-07 43145500.0 4931.389999999999 4754.64 4730.9 4637.2 4769.870000000001 5002.1 4500.29 4308.2699999999995 3737.6800000000003 4743.4 5665.6 True False 5432.021082502556 5155.330199210529 5051.9673232127625 4923.629312154685 4434.850786358187 4961.364556040969 4671.550998603177 4222.338175077566 3580.598307732325 4443.900914486293 4968.767117197486 1.0932331812657698 1.0375471575971684 1.0167446378654597 0.990915693173348 0.892545511140711 0.9985101815033962 0.9401831255955607 0.849775824764167 0.7206210762705005 0.894366914300618 1.0 12.27867220997983 -6.628891266144487 0.71594697147771 0.869969088674177 1.08051457082553 0.4824820852917042 0.07137816923124934 0.8078170834835017 0.6824133420082591 0.019000208749967527 0.09523680806660366 2.3502211696109035e-07 6.628891266144487 0.21054548215135294 DRICS(ph)DEEEDEEKGGRR ddPTM_A549_MK2206_60min_R1 3 DRICSDEEEDEEKGGRR 17 3 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 DRICS(1)DEEEDEEKGGRR;DRICS(1)DEEEDEEKGGRR;DRICS(1)DEEEDEEKGGRR 131.09 7.6516e-13 43090200.0 2133.34 3177.5800000000004 2210.96 2089.71 3278.57 2188.04 2202.05 2053.5 3314.27 3591.65 3989.06 True False 2493.3956368446243 3339.305249458464 2524.5073739563572 2601.6890438106466 2796.2966960954172 2419.5769404965963 2602.1339812031133 2344.5899135799996 2563.593136801645 2780.2937704907413 2998.4663095447845 0.8315569959574306 1.113671092060869 0.841932879459172 0.8676732620036091 0.9325756594943834 0.8069381779593605 0.8678216503283505 0.7819297172413273 0.854968131087936 0.9272386225052616 1.0 11.550009047585602 -4.191535166175128 20.03396090167224 0.9078568691418151 0.900170066283042 0.0 0.09247169316285063 0.0 0.0 0.012688540310616841 0.0 6.433759667297166e-05 4.191535166175128 -0.007686802858773101 DRICS(ph)DEEEDEEKGGRR ddPTM_A549_PD325901_60min_R1 3 DRICSDEEEDEEKGGRR 17 3 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 DRICS(1)DEEEDEEKGGRR;DRICS(1)DEEEDEEKGGRR;DRICS(1)DEEEDEEKGGRR 125.45 3.9635e-11 50404000.0 2971.6499999999996 3513.8100000000004 3860.5 3544.04 4020.5600000000004 4780.3 4515.8 3912.44 3088.65 3271.5599999999995 4250.219999999999 True False 3273.329720386894 3809.9311004172664 4122.496745072367 3762.9473017011755 3738.169735779019 4741.3708217034155 4687.651240140579 3834.4033149501975 2958.844781569703 3064.993143272075 3727.469884364427 0.8781639615969778 1.0221225707010373 1.1059772105376235 1.0095178280274149 1.0028705400034148 1.2720078146283587 1.2575960062893636 1.0286879395147692 0.7937944164166514 0.822271738835172 1.0 11.863980981140326 -8.555104422132299 11.242376165954019 0.9030281137893473 1.0836896569999843 0.36229350791039217 0.11759949417947123 0.5924160508763618 204.2547067975203 0.022203425358042456 0.02519734092343036 2.7854513518300128e-09 8.555104422132299 0.180661543210637 DRLGS(ph)PLAVDEALR ddPTM_A549_MK2206_60min_R1 2 DRLGSPLAVDEALR 14 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 DRLGS(1)PLAVDEALR;DRLGS(1)PLAVDEALR 54.974 0.0047129 9004800.0 481.97 171.61 297.41999999999996 326.45 300.03999999999996 562.92 498.99 402.02 385.40000000000003 546.07 391.54 True False 563.3147529648356 180.34421599442553 339.59862827102256 406.4302646548972 255.90451346058452 622.4878207639455 589.6500239688203 459.00756613461454 298.1075153573348 422.71240773791425 294.309812045736 1.9140196143963288 0.6127699744050663 1.1538814350445394 1.380960634067265 0.8695072436824387 2.1150766820754527 2.003501072119159 1.5596067387086787 1.0129037604461812 1.4362837745695831 1.0 8.201191831114366 -8.773589154572095 23.326392631567977 1.0060933084330417 1.4321222195936607 0.054966810011025546 0.45671103048690453 135.42707528907485 260005.52776259277 0.07756339039114578 0.0829256973730766 1.6842666349408043e-09 8.773589154572095 0.42602891116061903 DRLGS(ph)PLAVDEALR ddPTM_A549_PD325901_60min_R1 2 DRLGSPLAVDEALR 14 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 DRLGS(1)PLAVDEALR;DRLGS(1)PLAVDEALR 97.50200000000001 1.1779e-05 15143000.0 1110.96 1052.04 672.4300000000001 1012.08 1141.07 964.99 1092.6100000000001 760.8499999999999 769.88 835.0 1204.13 True False 1223.7438413544742 1140.6991029347016 718.0651434500747 1074.59388299955 1060.9251796777965 957.1314413814144 1134.1898714491329 745.6742498747216 737.524620929818 782.277957498009 1056.0296436089745 1.1588158048029196 1.0801771615391116 0.6799668435405769 1.0175792786716975 1.0046357941734396 0.9063490283382802 1.0740132896014607 0.7061110967741252 0.6983938617568843 0.7407727256827555 1.0 10.044434617547287 -8.250619726121178 24.886602323716367 0.8422355681069504 0.9789738298006946 0.2903291156049215 0.1423347079016037 1062.7563284245782 2444478.153669142 0.026049921060460095 0.03345634974562335 5.615394520540515e-09 8.250619726121178 0.13673826169374415 DRLGS(ph)YSGPTSVSR ddPTM_A549_MK2206_60min_R1 3 DRLGSYSGPTSVSR 14 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 DRLGS(0.985)YS(0.015)GPTSVSR;DRLGS(0.977)YS(0.022)GPT(0.001)S(0.001)VSR;DRLGS(0.939)YS(0.061)GPTSVSR 185.85 1.1259e-26 50391200.0 6168.9 6255.1 5628.8 5306.2 8435.900000000001 6759.7 6383.8 6422.5 9457.2 9840.400000000001 9492.900000000001 True False 7210.059504875353 6573.457872307742 6427.04847963127 6606.21923820437 7194.99028496916 7475.00696727429 7543.653826754359 7332.909043081343 7315.159300045114 7617.446805545384 7135.550939288371 1.010441879852155 0.9212263955841528 0.9007080930841537 0.9258176830930464 1.0083300289194932 1.0475725043341604 1.0571929050662328 1.0276584254631715 1.025170917044095 1.0675345001888632 1.0 12.800809109835233 -6.810409404437167 5.698010867350472 1.0196751750171498 0.9354197770028629 0.6344409750009897 0.03323277542990723 0.09651662213396547 7.005722790283968 0.004543073374968061 0.008794948305428783 1.5473572551843607e-07 6.810409404437167 -0.08425539801428683 DRLGS(ph)YSGPTSVSR ddPTM_A549_PD325901_60min_R1 1 DRLGSYSGPTSVSR 14 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 DRLGS(0.999)YS(0.001)GPTSVSR 132.62 2.1215e-09 130060000.0 2461.4 2849.8 2980.2 3809.6 3192.8 3276.9 3099.0 3527.9 3095.5 3650.9 3307.7 True False 2711.2795160130895 3089.962647373969 3182.4542933984385 4044.9103397706576 2968.5487425620436 3250.214012852731 3216.9341408378696 3457.533266915989 2965.406899891218 3420.381550933509 2900.8738692378784 0.9346423313211479 1.0651833849590187 1.0970674482426006 1.3943764955328244 1.0233291333490293 1.1204258300643148 1.1089534691430851 1.1918936923046424 1.022246065689955 1.1790866149696182 1.0 11.502271852800213 -8.882999953418446 7.7707016792339045 1.0097931809526481 1.1204494555601578 0.0 0.11932064285147387 0.2946564152862674 18.98112833716221 0.018417956051166508 0.019561776553414328 1.3091820634196378e-09 8.882999953418446 0.11065627460750971 DRLPS(ph)IVVEPTEGEVESGELR ddPTM_A549_MK2206_60min_R1 2 DRLPSIVVEPTEGEVESGELR 21 1 B5MBX5;B5MCP4;Q53QV2 B5MBX5 LBH Protein LBH 1 DRLPS(1)IVVEPTEGEVESGELR;DRLPS(1)IVVEPTEGEVESGELR 119.14 2.8225999999999998e-15 8564100.0 1537.01 1796.17 1808.96 1640.58 2388.5 1543.81 1354.8400000000001 1311.72 2187.58 2275.3 2049.19 True False 1796.4197117133474 1887.5873809376344 2065.4977291276605 2042.5221736484355 2037.1548140268178 1707.1749495018591 1600.9968906669808 1497.6603269740237 1692.096622847427 1761.3081497355213 1540.319568233136 1.1662642926584241 1.225451795761344 1.340954027804077 1.3260379312010977 1.3225533558361462 1.1083251714188889 1.0393926842748913 0.9723049410402248 1.0985360815667562 1.143469307317751 1.0 10.589013980826556 -7.4152804620053985 3.76701785088977 1.0412587306425136 1.2792812303224286 0.7439679375885495 0.06348024402982907 0.08692116432270056 2.2249961826944245 0.009578991243402803 0.015547828974226685 3.843434976069778e-08 7.4152804620053985 0.23802249967991496 DRLS(ph)PWAAR ddPTM_A549_MK2206_60min_R1 2 DRLSPWAAR 9 1 Q6ZU80;Q86TS1;Q6ZU80-3;Q6ZU80-1;G3V3F4;G3V3U2 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 DRLS(1)PWAAR;DRLS(1)PWAAR 73.435 0.00062258 6256500.0 871.87 601.62 585.59 539.3199999999999 1050.05 591.53 815.4 768.92 1298.27 1252.12 1133.67 True False 1019.0203408250546 632.2398882732141 668.6354674508377 671.4534242109947 895.5890359928233 654.1253119741646 963.547625291441 877.9167647187402 1004.2139179111753 969.2652223648927 852.1484512997131 1.1958249050043164 0.7419363226077683 0.7846466967475234 0.7879535815465969 1.0509777194652572 0.7676189647196802 1.130727426449957 1.0302392304764796 1.1784495018204035 1.1374370520612351 1.0 9.734960971514264 -7.773036887504428 24.988466597448 1.0846643333848172 0.8796540353676167 0.3648466473742027 0.13554665416529146 183.4193309363303 395202.1750747073 0.020852476055415372 0.028941365815363836 1.6864097813624207e-08 7.773036887504428 -0.2050102980172005 DRLS(ph)QSK ddPTM_A549_MK2206_60min_R1 1 DRLSQSK 7 1 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 DRLS(1)QSK 98.04799999999999 0.0032245 5607900.0 2112.7 2378.7 1898.3 1571.7 1439.2 1336.3 1438.1 1373.6 1664.8 2906.7 3309.6 True False 2469.2721094441727 2499.765669750829 2167.5074845231734 1956.7665705562933 1227.495586496711 1477.7063790358504 1699.3841549320846 1568.3120064735745 1287.7254581393124 2250.0744512091755 2487.7349796867957 0.9925784416775184 1.0048360014882085 0.8712774882459792 0.7865655250796245 0.49341895198629715 0.5939967042718887 0.6831049805578712 0.6304176366370923 0.5176296786651431 0.9044671034422077 1.0 11.280617086908519 -6.086704937059879 2.357399919491739 0.7186248932757509 0.9975353929400221 0.39379606668116185 0.14554650660261173 0.3398783176565742 3.643408879422643 0.028139504663041284 0.09917344895284269 8.19021048215021e-07 6.086704937059879 0.2789104996642713 DRLS(ph)QSK ddPTM_A549_PD325901_60min_R1 2 DRLSQSK 7 1 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 DRLS(1)QSK;DRLS(1)QSK 129.85 0.0015951 20510000.0 7248.799999999999 6795.9 6656.8 6244.799999999999 7510.1 5979.6 5669.4 6230.5 6214.200000000001 6625.4 7753.1 True False 7984.692839715476 7368.614343213128 7108.570478590269 6630.527113030181 6982.616484438484 5930.904120130065 5885.152119414722 6106.2277897673075 5953.038784462613 6207.071113302163 6799.5178509502675 1.1743027983373224 1.0836965950730355 1.0454521385802098 0.9751466586860318 1.0269281789535456 0.8722536288806405 0.8655249163868644 0.8980383497212131 0.8755089573933018 0.9128693018189067 1.0 12.731216734156758 -5.794173842988478 0.8431792465147402 0.9286136408361293 1.2071490765449422 0.762361657689703 0.04695193505071081 0.6097875213864757 0.49841131690073365 0.009535390678457609 0.13214226293849426 1.6062981419961121e-06 5.794173842988478 0.2785354357088129 DRLS(ph)QVLR ddPTM_A549_PD325901_60min_R1 1 DRLSQVLR 8 1 Q9HD20-3;Q9HD20-2;Q9HD20 Q9HD20-3 ATP13A1 Manganese-transporting ATPase 13A1 1 DRLS(1)QVLR 60.434 0.0031525 3190200.0 209.88 104.92 190.71 287.65 229.71 87.448 135.18 235.78 154.66 307.61 294.73 True False 231.18686309451013 113.761976616772 203.6527274323926 305.4174871994512 213.57596205647926 86.73585248129197 140.32434887333437 231.0771829341682 148.1601780446376 288.187452102949 258.4800784474045 0.8944088243982486 0.44011893411708436 0.7878855835067067 1.1815900437433424 0.8262762969562379 0.33556107303233035 0.5428826457969664 0.8939844970729061 0.5731976674356559 1.1149309990695835 1.0 8.013909283341398 -10.978414760941847 1.2256321138493476 1.0013389467950322 0.7042884357038232 0.22858059151163235 0.23119235831779805 0.6791603884486649 1.8010741048496777 0.17009608875152996 0.03840698855289376 1.0509577062874526e-11 10.978414760941847 -0.29705051109120906 DRLVS(ph)VLY(ph)SVVTPMLNPIIYTLRNK ddPTM_A549_MK2206_60min_R1 1 DRLVSVLYSVVTPMLNPIIYTLRNK 25 2 Q9UGF6 Q9UGF6 OR5V1 Olfactory receptor 5V1 2 DRLVS(0.997)VLY(0.993)S(0.006)VVT(0.001)PMLNPIIY(0.001)T(0.001)LRNK 42.973 0.033707 52566000.0 4655.8 6034.6 5252.8 5084.4 6392.0 5583.5 5819.2 5342.2 8222.7 7635.6 7600.3 True False 5441.585216618635 6341.73536413939 5997.72602576164 6330.07822824739 5451.745267431198 6174.342263972661 6876.473315055129 6099.473209801349 6360.271578953702 5910.712656845493 5712.935752391093 0.952502435256884 1.1100659343989856 1.0498500745875448 1.108025453567896 0.9542808642910825 1.0807652197713673 1.2036671884813424 1.0676600392798876 1.1133105385075743 1.034619136819738 1.0 12.480016590143558 DRNS(ph)VGPSR ddPTM_A549_PD325901_60min_R1 1 DRNSVGPSR 9 1 C9JUL4;Q9UDY4 C9JUL4 DNAJB4 DnaJ homolog subfamily B member 4 1 DRNS(0.998)VGPS(0.002)R 41.295 0.025065 27281000.0 821.34 912.98 540.78 720.01 570.76 374.22 511.96 600.48 462.37 921.17 1020.3 True False 904.7218321614492 989.9200287035884 577.480582774313 764.483382438647 530.6717866151062 371.1724763922454 531.4429179552615 588.502955332553 442.9381968349871 863.0071689921442 894.8095682145922 1.0110775122427835 1.1062912868475128 0.6453670180645881 0.8543531602640502 0.5930555566967753 0.41480611023510117 0.5939173393235458 0.6576851390925437 0.49500833760503793 0.9644590308908932 1.0 9.80543687301791 -5.760254718292242 24.99482170741521 0.7050253315635092 1.0586845009541945 0.39218771476723735 0.17585230689460704 28.350802584073907 598086.247286853 0.02954689843101477 0.10302292968002573 1.7367818890809608e-06 5.760254718292242 0.3536591693906853 DRNS(ph)WGGFSEK ddPTM_A549_MK2206_60min_R1 2 DRNSWGGFSEK 11 1 G3V321;A0A6I8PIS8;G3V5T4;A0A6I8PUC8;Q8WXF7-2;Q8WXF7 G3V321 ATL1 Atlastin-1 1 DRNS(1)WGGFSEK;DRNS(1)WGGFSEK 147.12 4.8726e-12 50363000.0 4400.29 3399.25 2245.98 1884.91 4730.58 3878.8999999999996 3393.16 3658.2599999999998 5683.9 4843.5 5449.6 True False 5142.951375238371 3572.2573056293377 2564.4937365481505 2346.713034616825 4034.7179485614324 4289.362623394564 4009.6532502255423 4176.829557951384 4396.505725323183 3749.3499860431552 4096.313918691436 1.255507140644456 0.8720662958298109 0.6260491230533856 0.5728840809560026 0.9849630737895986 1.0471274195618283 0.978844231622371 1.0196556320775505 1.0732833988288775 0.9152985001796157 1.0 12.000110564351926 -6.976649578774372 24.842791746159673 1.0297314938854942 0.8147175818363487 0.18457340230873664 0.168018623027256 223.61009175629894 237900.16137972687 0.023680042302610612 0.04474932793124067 1.055237997811769e-07 6.976649578774372 -0.21501391204914555 DRNS(ph)WGGFSEK ddPTM_A549_PD325901_60min_R1 2 DRNSWGGFSEK 11 1 G3V321;A0A6I8PIS8;G3V5T4;A0A6I8PUC8;Q8WXF7-2;Q8WXF7 G3V321 ATL1 Atlastin-1 1 DRNS(1)WGGFSEK;DRNS(1)WGGFSEK 113.59 7.1748e-06 38046000.0 7133.7 6057.9 6072.5 5865.5 6127.2 6452.5 5320.9 5121.5 8537.5 7909.400000000001 9895.400000000001 True False 7857.90797244762 6568.420493201897 6484.616366908942 6227.798613482982 5696.846609692477 6399.952979319561 5523.389761208202 5019.347664760974 8178.698564955993 7409.99913417335 8678.328532108864 0.9054632978429223 0.7568762197581552 0.7472195069495897 0.7176265095796742 0.6564451424735499 0.7374637818377624 0.6364577857098017 0.5783772354538017 0.9424278574722892 0.8538509583679813 1.0 13.083201487395751 -8.873220480050913 6.914384554582444 0.9746535663524301 0.7156895840442454 0.5360124500951922 0.08703849175057438 0.09109684786846708 5.237210422635609 0.014220960181284822 0.015094278375143544 1.338996740908327e-09 8.873220480050913 -0.2589639823081846 DRNT(ph)LPK ddPTM_A549_MK2206_60min_R1 1 DRNTLPK 7 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;H0Y6F6;Q8NEY1-5 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 DRNT(1)LPK 61.161 0.011183 3897600.0 2277.9 2375.1 2307.3 1709.1 2531.0 2203.4 2086.7 2284.9 2738.2 2416.4 2589.4 True False 2662.353830691952 2495.9824451276722 2634.5098346100817 2127.8295767244153 2158.693252795427 2436.562325501453 2465.826379317698 2608.791572212779 2118.002072006887 1870.5335617373157 1946.3805161956107 1.367848582812461 1.2823712652068218 1.3535430573254434 1.0932238372810392 1.1090807962950646 1.2518427436090196 1.2668778580549063 1.3403296788604908 1.0881747193743632 0.9610317952593642 1.0 10.926578068349125 -12.898804300074001 0.04665088786821707 6.731373338507042e-09 1.8806576792086325 0.5609918466005982 0.09241533038982479 160.6670895537926 0.8681990093554264 27.20217884613848 10.964421584991992 1.2623962620583608e-13 12.898804300074001 1.8806576724772592 DRNVIPDT(ph)PPSTPLVPSR ddPTM_A549_MK2206_60min_R1 2 DRNVIPDTPPSTPLVPSR 18 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 DRNVIPDT(0.986)PPS(0.006)T(0.007)PLVPS(0.001)R;DRNVIPDT(0.999)PPS(0.001)TPLVPSR 61.61600000000001 0.0012058 9005200.0 1683.6100000000001 1891.5 1816.21 1770.8000000000002 2299.6000000000004 2210.6000000000004 1905.8400000000001 1813.42 3023.2 2731.3999999999996 2856.4 True False 1967.7622076874636 1987.7692707502813 2073.7758881450945 2204.6460794942327 1961.3318862617011 2444.5242247224814 2252.1064584074566 2070.4778383658345 2338.4500270583653 2114.3748429603147 2147.077047370487 0.9164842081924218 0.9258024872394267 0.9658600238332555 1.0268127462841867 0.9134892893870451 1.1385358656394173 1.048917392678385 0.9643239588917114 1.0891318641416485 0.9847689655803351 1.0 11.068158247570413 -6.198089641777668 0.8493244359377498 1.0405589407982272 0.904529046815462 0.3107221207444113 0.057531956131881515 0.7103063299299346 0.7573864563679346 0.009180124755716236 0.06663675978143917 6.337388890928725e-07 6.198089641777668 -0.13602989398276522 DRNVIPDT(ph)PPSTPLVPSR ddPTM_A549_PD325901_60min_R1 2 DRNVIPDTPPSTPLVPSR 18 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 DRNVIPDT(0.999)PPSTPLVPSR;DRNVIPDT(0.999)PPS(0.001)TPLVPSR 76.889 0.00016934 16402800.0 2500.5 2109.8 2173.6 2579.6000000000004 2784.0 2614.1000000000004 2391.3999999999996 2643.8999999999996 2785.8 2828.1000000000004 2948.0 True False 2754.3489192291927 2287.600250343744 2321.113566918612 2738.9360333033355 2588.461444278605 2592.8116363020927 2482.4060356242903 2591.165340400574 2668.7225138804574 2649.5332833534344 2585.414688911711 1.0653412510735722 0.8848097986581305 0.8977722517294305 1.0593797757280659 1.0011784397218602 1.0028610293822904 0.9601577829161401 1.0022242665803387 1.0322222293104606 1.0248001199640098 1.0 11.336179985571345 -6.259833175882218 24.999019632699266 1.011139741355229 0.9428579720279102 0.23302931403882898 0.048927731812263967 136.5725025674973 2125585.5004368224 0.006388771956289877 0.016011403545109514 5.49752007743207e-07 6.259833175882218 -0.06828176932731878 DRPFFAGLVK ddPTM_A549_MK2206_60min_R1 2 DRPFFAGLVK 10 1 Q32Q12;P22392-2;J3KPD9;E7ERL0;P15531;P15531-2;E5RHP0 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 106.29 0.00029985 9011700.0 2502.2 2731.1 2457.98 2226.21 3392.6 2622.5 2675.9 2392.0 3395.8 3365.4 3252.2 False True 2924.510187083453 2870.1013245287295 2806.5585243682613 2771.6315499383654 2893.553034150046 2900.0112093253883 3162.0763925893625 2731.0733251927713 2626.656721978299 2605.153802628192 2444.588983846206 1.1963197929830154 1.1740629379802905 1.1480696930706726 1.1337822301635367 1.1836562519387046 1.186298076481815 1.2935002217077385 1.117191210154201 1.0744778526513836 1.0656817239392777 1.0 11.255376205539795 -8.850605704925343 1.7240097582434248 1.0276817898286592 1.183582096320975 0.666767251861678 0.04329824900675284 0.13690970598870109 0.8021639639293784 0.008978625652054213 0.009353275594357901 1.4105688698478196e-09 8.850605704925343 0.1559003064923159 DRPFFAGLVK ddPTM_A549_PD325901_60min_R1 2 DRPFFAGLVK 10 1 Q32Q12;P22392-2;J3KPD9;E7ERL0;P15531;P15531-2;E5RHP0 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 108.7 0.00023552 21117000.0 3222.7 3090.5 3339.3999999999996 2985.5 3908.8 3341.8 3357.5 3362.0 3252.9 3931.0 3667.2000000000003 False True 3549.8661315736513 3350.947281110691 3566.03176544351 3169.907554437551 3634.2593726279506 3314.58548877026 3485.271499794497 3294.9422725620225 3116.1919252644634 3682.7959891313417 3216.1576482961395 1.1037599893320853 1.0419101448232677 1.1087863703860186 0.9856194568437617 1.1300003824605158 1.030604171572953 1.0836755784160421 1.0244965057318076 0.9689176545544538 1.1450918741755145 1.0 11.651122410345817 -8.508800998404064 3.9565342810746955 0.9854714779355618 1.0670409674467682 0.0 0.061748717136326355 0.12689719549790054 4.478132310664488 0.005908984066824301 0.0069582185028429526 3.098838918051118e-09 8.508800998404064 0.08156948951120646 DRPFFPGLVK ddPTM_A549_MK2206_60min_R1 2 DRPFFPGLVK 10 1 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 ; 138.22 3.2777000000000003e-07 18216200.0 4292.1 5883.6 4700.299999999999 4626.6 6211.9 5120.7 4535.4 4853.799999999999 7412.2 6961.5 6728.8 False True 5016.501548229914 6183.050109112533 5366.873217881406 5760.117207695966 5298.137738854174 5662.569075154442 5359.423472831494 5541.84101413908 5733.348534851158 5388.892315028271 5057.853254567474 0.9918242573961161 1.2224653025528083 1.0610970599107186 1.1388462491461797 1.0475072075429852 1.1195597796438401 1.0596241533879394 1.0956903522526167 1.1335537522117076 1.0654505071221378 1.0 12.304309464806982 -10.89295863794061 1.0771930182030496 0.9984786777861742 1.1013239570130033 0.10989434575596957 0.05992106361114508 0.4821975424267595 0.969177769940687 0.03825894452818093 0.008618912544497377 1.2795031578022475e-11 10.89295863794061 0.10284527922682918 DRPFFPGLVK ddPTM_A549_PD325901_60min_R1 2 DRPFFPGLVK 10 1 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 ; 120.06 5.4558e-05 36605000.0 3236.0 2787.2 3235.8 2580.75 3394.9 2885.1 3247.3 3372.7000000000003 2972.7 3526.6 3135.9 False True 3564.516337782708 3022.087125679252 3455.4008464461026 2740.1570661914966 3156.4539357691924 2861.6047021518552 3370.877778490744 3305.4288526680325 2847.7677568427166 3303.929874146677 2750.2041801079467 1.2960915278816858 1.098859185633495 1.2564161131885403 0.9963467752724978 1.1477162163448171 1.0405062732613315 1.2256827339846583 1.2018848915204154 1.0354750303415436 1.201339848889691 1.0 11.425323015551829 -2.0000006741849976 0.059164227579385935 0.7712155822808807 1.8484572180833623 0.0 0.10793899553256037 216.34814254683212 0.9307785057978301 3.428575809065361 20.07648961669406 0.009999984476328796 2.0000006741849976 1.0772416358024817 DRPGS(ph)PESPLLDAPFSR ddPTM_A549_MK2206_60min_R1 4 DRPGSPESPLLDAPFSR 17 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 DRPGS(0.998)PES(0.002)PLLDAPFSR;DRPGS(0.988)PES(0.012)PLLDAPFSR;DRPGS(0.925)PES(0.075)PLLDAPFSR;DRPGS(0.992)PES(0.007)PLLDAPFS(0.002)R 55.864 0.0030126 25769200.0 2488.94 2465.9500000000003 2605.77 2024.37 3388.12 2437.4700000000003 2261.79 2498.01 4431.76 3420.0 4404.900000000001 True False 2909.0122232593285 2591.4563220759505 2975.307368669835 2520.340740877421 2889.7320362154246 2695.4014575383635 2672.7279659160267 2852.110567334782 3427.9734360664784 2647.419624706845 3311.041760944637 0.8785791401282085 0.7826709867098174 0.8986015832735925 0.7611926767599483 0.8727561428856719 0.8140644703826895 0.8072166281447021 0.8613937163151568 1.0353156751150372 0.7995730092970915 1.0 11.693069491690501 -8.69695650859438 4.908027181943284 1.0167676098808451 0.8303993282163852 0.15220805253160297 0.07672818774739296 0.05307028349063069 2.4993185397104156 0.0062095248267323155 0.0069854389314710635 2.009294018586185e-09 8.69695650859438 -0.18636828166445996 DRPGS(ph)PESPLLDAPFSR ddPTM_A549_PD325901_60min_R1 2 DRPGSPESPLLDAPFSR 17 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 DRPGS(0.861)PES(0.139)PLLDAPFSR;DRPGS(0.998)PES(0.002)PLLDAPFSR 122.34 1.7784999999999999e-10 76344000.0 921.43 1037.9099999999999 1112.46 1028.74 1394.3400000000001 1366.4499999999998 1184.53 920.31 1579.51 1150.98 1439.95 True False 1014.972895279085 1125.3783182454615 1187.9582253654212 1092.2829333619443 1296.4063686118639 1355.3220842450542 1229.607937349688 901.9536950807715 1513.128687593984 1078.3069263725242 1262.8452785951215 0.8037191194223039 0.8911450494532569 0.9406997401035462 0.8649380505085129 1.0265757734423953 1.0732289277375375 0.9736805911153192 0.7142234368442733 1.1981900817472237 0.8538709726753773 1.0 10.302462178358441 -6.219062767555883 0.37881611637954987 1.0763071709070098 0.7565483831913623 0.0 0.13507759040609457 3.18965902785107 0.50011242599552 0.04019162158600134 0.41308419319677986 6.038613484146085e-07 6.219062767555883 -0.3197587877156475 DRPPCS(ph)PSR ddPTM_A549_MK2206_60min_R1 3 DRPPCSPSR 9 1 O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;B1ALY4;X6R242 O95758-1 PTBP3 Polypyrimidine tract-binding protein 3 1 DRPPCS(0.866)PS(0.134)R;DRPPCS(0.974)PS(0.026)R;DRPPCS(0.994)PS(0.006)R 69.21600000000001 0.001146 139563000.0 3686.91 4061.2 3032.08 2459.19 3343.7699999999995 3404.2 3111.1899999999996 2949.69 4376.2 4509.5 4129.5 True False 4309.170271704843 4267.897733212288 3462.074537045265 3061.6916603972336 2851.9058624653326 3764.4301844749216 3676.4529511043406 3367.8175905467665 3384.9976873553906 3490.8008180162306 3104.031181597964 1.3882496726358495 1.374953240970718 1.1153478604113054 0.9863598273587787 0.9187748755143508 1.2127552734624858 1.1844123773304662 1.0849818811462468 1.0905166505488466 1.1246023682723305 1.0 11.599927334877462 -5.80067846678029 3.9300380346183528 1.0568657779786965 1.3895902662741162 0.6640553416100778 0.08238621262033519 0.08707819916669521 2.8034945903588047 0.011949563824500662 0.04458861200695486 1.5824191617427541e-06 5.80067846678029 0.3327244882954197 DRPPCS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 DRPPCSPSR 9 1 O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;B1ALY4;X6R242 O95758-1 PTBP3 Polypyrimidine tract-binding protein 3 1 DRPPCS(0.971)PS(0.029)R;DRPPCS(0.998)PS(0.002)R 77.279 0.00053691 164392000.0 3172.3999999999996 3428.4 3750.6000000000004 3342.2 2594.9 2852.7 3023.2 3608.4 2488.0 2951.6000000000004 3746.3999999999996 True False 3494.459712602553 3717.3232999708457 4005.138270189983 3548.640103313074 2412.643175919019 2829.468557009672 3138.249530358517 3536.4276312649604 2383.4380122530624 2765.2354722767927 3285.6165503863062 1.0635628531246872 1.1313929190957421 1.218991385260425 1.0800530277630367 0.7343045479958252 0.8611682202163845 0.9551478336659637 1.0763360778813842 0.7254157555216935 0.8416184389963797 1.0 11.681948404287978 -6.599968942743767 7.0488837654094105 0.8816336286002315 1.139328542682455 0.5557703811954173 0.10345163704308825 0.14467814218665342 10.974295275271283 0.01783588949286531 0.03732460146611739 2.512066067892853e-07 6.599968942743767 0.25769491408222356 DRPPS(ph)AR ddPTM_A549_PD325901_60min_R1 1 DRPPSAR 7 1 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 DRPPS(1)AR 52.57899999999999 0.013101 4882300.0 474.92 395.59 544.5 476.23 472.32 438.11 359.49 446.07 543.76 619.62 744.98 True False 523.1335287823748 428.9277576232256 581.4530443444903 505.64564550319704 439.1458726155423 434.5421774149075 373.17058867047604 437.1727839148544 520.9076581763363 580.4970874549891 653.3521828173152 0.8006914839200115 0.6565031370579483 0.8899534732358447 0.7739250878795662 0.6721426577652264 0.6650963888130308 0.5711629936879217 0.6691227111689209 0.7972846374066345 0.8884903161290927 1.0 9.35171706123771 -9.845486634958162 0.8649196497535055 0.9759591918359233 0.714795175428043 0.483212706929977 0.08818800028015188 0.27479943332316337 0.42465162640673526 0.03437132801640677 0.018595908852358532 1.427293753235538e-10 9.845486634958162 -0.26116401640788023 DRPS(ph)QQQPLR ddPTM_A549_MK2206_60min_R1 2 DRPSQQQPLR 10 1 A0A0U1RQU4;A0A0U1RQN5;A0A0U1RR31;A0A0U1RQG9;A0A0U1RQK6;U3KQA5;A0A0U1RQT7;Q8IXA3;A0A0U1RQY7;U3KQB3;Q9HCP0-2;Q9HCP0 A0A0U1RQU4 hCG_2004507;CSNK1G1 Casein kinase I isoform gamma-1 1 DRPS(1)QQQPLR;DRPS(1)QQQPLR 139.78 3.9964e-08 20151400.0 1518.0500000000002 1292.44 1396.13 825.47 1785.4499999999998 1535.47 1394.56 1200.03 2130.06 1896.78 2163.8599999999997 True False 1774.2597272408423 1358.2196755424245 1594.1222274494742 1027.7101870567558 1522.8126701713127 1697.9524162375046 1647.933500522973 1370.1379274377432 1647.6048110068612 1468.296080629078 1626.5138425021364 1.0908359221286565 0.8350495643203483 0.9800852509174881 0.6318484111243621 0.9362432894076722 1.0439212823577764 1.0131690597774967 0.8423770469300162 1.0129669775649002 0.902725843617989 1.0 10.667567385199266 -6.999324804565201 24.999745033023128 0.9953503747891863 0.8747927700508036 0.07679239468177645 0.11807215788301696 28.71522692023105 1063112.1590022063 0.015469724221266128 0.029053951848863585 1.0015559041077554e-07 6.999324804565201 -0.12055760473838273 DRPS(ph)QQQPLR ddPTM_A549_PD325901_60min_R1 2 DRPSQQQPLR 10 1 A0A0U1RQU4;A0A0U1RQN5;A0A0U1RR31;A0A0U1RQG9;A0A0U1RQK6;U3KQA5;A0A0U1RQT7;Q8IXA3;A0A0U1RQY7;U3KQB3;Q9HCP0-2;Q9HCP0 A0A0U1RQU4 hCG_2004507;CSNK1G1 Casein kinase I isoform gamma-1 1 DRPS(1)QQQPLR;DRPS(1)QQQPLR 117.03 2.1329000000000002e-05 16502200.0 1354.58 1071.13 1167.4299999999998 1284.6 1205.19 1363.22 1238.8899999999999 1376.08 1411.69 1316.05 1733.1100000000001 True False 1492.0959644109093 1161.3978842310628 1246.6588201268846 1363.9468244617249 1120.5416120797886 1352.1183882941507 1286.0366368966204 1348.6330048861228 1352.361578584214 1232.9543784015018 1519.9484570894751 0.9816753702741341 0.7641034660181865 0.8201980891602677 0.8973638665836897 0.7372234281059081 0.8895817367934308 0.8461054260742705 0.8872886436350601 0.8897417358308514 0.8111817033338528 1.0 10.569806685987386 -9.954641562737473 0.45488923371652157 1.0117593762716541 0.8386938245924255 0.0 0.08337687655719485 0.7430360233292169 0.2968502579340325 0.05497704983650797 0.017757520602563935 1.110090630935116e-10 9.954641562737473 -0.17306555167922866 DRPSLTVT(ph)PK ddPTM_A549_PD325901_60min_R1 1 DRPSLTVTPK 10 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DRPSLT(0.018)VT(0.982)PK 102.9 0.00015296 27873000.0 5056.1 4479.3 5141.5 4759.5 5830.3 5496.1 4850.0 5011.4 5438.4 5758.6 6186.7 True False 5569.391549895904 4856.78633110472 5490.433108351143 5053.483505391229 5420.799841443081 5451.341583826148 5034.569404021834 4911.443695632751 5209.842960545437 5395.001013231177 5425.775120722552 1.0264692925854668 0.8951322572428952 1.0119168203970792 0.9313846211743209 0.9990830288449537 1.004712038839566 0.9278986489494203 0.9052059081613195 0.9602025230731716 0.9943281638463342 1.0 12.405613538890497 -10.489114343941836 1.0702718915637988 0.9977068618273829 0.9612933540707541 0.08888044761636549 0.042331651411785284 0.8262052201125821 1.8244225933172526 0.01926035389728391 0.007080841370842661 3.242542342967092e-11 10.489114343941836 -0.03641350775662877 DRPVGGS(ph)PGGPR ddPTM_A549_MK2206_60min_R1 4 DRPVGGSPGGPR 12 1 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR 103.13 0.00016585 230538800.0 7779.11 8170.099999999999 7675.6 6851.3 7213.6 5578.1900000000005 5309.799999999999 5597.400000000001 8459.0 10648.3 13280.2 True False 9092.03358702053 8585.9231926814 8764.115497132203 8529.86880756654 6152.488995798135 6168.470363297159 6274.521928835529 6390.848591318569 6543.0500062472565 8242.841634434471 9982.359825125877 0.91081004354658 0.8601095675864532 0.8779602870127643 0.8544942235098181 0.6163361272864708 0.6179370881593496 0.6285609854537986 0.6402142081907952 0.6554612457245047 0.8257407846275998 1.0 13.285165192966378 DRPVGGS(ph)PGGPR ddPTM_A549_PD325901_60min_R1 4 DRPVGGSPGGPR 12 1 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR 85.45 0.0003282 724386200.0 13046.66 11589.460000000001 11894.4 11230.900000000001 12043.3 10731.03 9663.900000000001 10764.31 11955.2 13944.2 16136.999999999998 True False 14371.147318756532 12566.14446741341 12701.625510837655 11924.60718577548 11197.42015512949 10643.640049541658 10031.665002788992 10549.607392612164 11452.764519327893 13063.760832267944 14152.25130087119 1.015467222368491 0.8879254756195475 0.8974985845577631 0.8425943641236373 0.7912112297242909 0.7520810522129756 0.7088388122511263 0.7454366918966983 0.809253897196051 0.9230871155788309 1.0 13.788743950786962 -4.247225102961776 23.03894360939282 0.8693428920321796 0.8433506046767214 0.0 0.09896990801368268 0.0 0.0 0.015592718229449742 0.0 5.6594587266055156e-05 4.247225102961776 -0.02599228735545822 DRPVS(ph)QPSLVGSKEEPPPAR ddPTM_A549_MK2206_60min_R1 1 DRPVSQPSLVGSKEEPPPAR 20 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DRPVS(0.751)QPS(0.124)LVGS(0.125)KEEPPPAR 56.298 0.0014199000000000002 18742000.0 3465.1 3170.2 3169.2 2404.8 4109.2 3169.6 2742.5 3116.5 4627.9 3728.7 4005.3 True False 4049.9241664386827 3331.549638980992 3618.640214903249 2993.976107955574 3504.742123424324 3505.0049681898013 3240.7767505049997 3558.273418880968 3579.6880392376984 2886.3840803053813 3010.673469343586 1.3451887784169712 1.1065795320896643 1.201937125281214 0.9944539447542107 1.1641056923348314 1.1641929966433702 1.0764291722448343 1.1818861975944455 1.188999097938766 0.9587170809774653 1.0 11.555870529853827 -10.821412288757886 0.9748686626149943 0.9963888666548681 1.153923657416448 0.39485206244977034 0.08385276375788261 0.5324018586324328 0.8643360648216809 0.060326602748596574 0.01361903869686779 1.508647270097537e-11 10.821412288757886 0.15753479076157983 DRPVSQPSLVGS(ph)KEEPPPAR ddPTM_A549_PD325901_60min_R1 2 DRPVSQPSLVGSKEEPPPAR 20 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 DRPVSQPSLVGS(1)KEEPPPAR;DRPVSQPS(0.001)LVGS(0.999)KEEPPPAR 135.8 8.8468e-18 61353000.0 5462.0 4812.5 5620.6 5647.0 6205.1 5720.4 5721.6 6433.7 6735.2 6323.9 6856.8 True False 6016.498219088117 5218.066264470221 6002.047715413483 5995.802364732493 5769.275182432891 5673.814958992572 5939.338618979652 6305.374806359986 6452.142966288915 5924.607874756475 6013.457068836434 1.000505724114577 0.8677315236042558 0.9981026964535795 0.9970641340078017 0.9593940916833068 0.9435196583336414 0.9876745690526526 1.0485440794175382 1.0729506991454025 0.9852249391551489 1.0 12.55397890324644 -8.079352562767241 3.9417779021187034 1.0363178449107406 0.9602292262813245 0.3458637597370613 0.04126262271590982 0.17383994329086416 5.095637103943638 0.006799390867341279 0.008983963875085378 8.330046720573458e-09 8.079352562767241 -0.07608861862941618 DRPWS(ph)NSR ddPTM_A549_MK2206_60min_R1 2 DRPWSNSR 8 1 Q9NRR8 Q9NRR8 CDC42SE1 CDC42 small effector protein 1 1 DRPWS(0.964)NS(0.036)R;DRPWS(0.996)NS(0.004)R 68.485 0.0062433 30566000.0 3923.6000000000004 4595.9 3933.6 3783.75 6629.8 5377.400000000001 5268.1 5357.6 7739.599999999999 6934.299999999999 7490.400000000001 True False 4585.8077571899275 4829.811679323935 4491.443629099908 4710.7689198589915 5654.565202442951 5946.432898770775 6225.245578609079 6117.056206961873 5986.592957601521 5367.836813919489 5630.326955476788 0.8144833849709519 0.8578208188470889 0.7977234119114427 0.8366776844596361 1.0043049448385206 1.0561434434969184 1.1056632461732254 1.0864477774264298 1.0632762546370746 0.9533792364754294 1.0 12.459002987313749 -6.801480934956171 3.6947172699859383 1.0428369936811972 0.8242391850496552 0.863343185066547 0.04077943621974196 0.05650803339748702 1.6082490233138753 0.005711983746362262 0.011609241764920866 1.5794979444163978e-07 6.801480934956171 -0.218597808631542 DRPWSNS(ph)R ddPTM_A549_PD325901_60min_R1 1 DRPWSNSR 8 1 Q9NRR8 Q9NRR8 CDC42SE1 CDC42 small effector protein 1 1 DRPWS(0.414)NS(0.586)R 50.95 0.0084288 20753000.0 2409.9 2174.8 2905.5 2253.5 2100.9 2107.0 2056.2 2205.2 2608.1 2325.4 2871.6 True False 2654.551273925386 2358.0780284612647 3102.6847021908497 2392.6935769301676 1953.3400317115365 2089.8412905736222 2134.449816195814 2161.2155560540673 2498.4906269120625 2178.5738471447544 2518.411404572206 1.0540578354696204 0.9363355106239378 1.2320007352880824 0.9500805041567887 0.7756238826449183 0.8298252171108702 0.8475381791555959 0.8581662043502324 0.9920899430394983 0.8650587601332839 1.0 11.298298263848567 -3.753133686254409 15.36520157146467 0.9667367938991228 1.1440553421248219 0.0 0.12524305311721018 0.0 0.0 0.016422953904408184 0.0 0.0001765494275563883 3.753133686254409 0.17731854822569904 DRQAFS(ph)MYEPGSALKPFGGPPGDELTTR ddPTM_A549_MK2206_60min_R1 4 DRQAFSMYEPGSALKPFGGPPGDELTTR 28 2 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QQI0 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 DRQAFS(0.918)MY(0.02)EPGS(0.062)ALKPFGGPPGDELTTR;DRQAFS(0.965)MY(0.024)EPGS(0.011)ALKPFGGPPGDELTTR;DRQAFS(1)MYEPGSALKPFGGPPGDELTTR;DRQAFS(1)MYEPGSALKPFGGPPGDELTTR 88.838 4.3849e-10 21798100.0 4676.969999999999 4179.59 4854.51 4340.67 7032.4 5061.57 4678.23 4689.6 7387.200000000001 7028.799999999999 6766.099999999999 True False 5466.3281950618275 4392.313278527714 5542.9525147197955 5404.134344860083 5997.943275763945 5597.181977801755 5528.203835010029 5354.365161297668 5714.01099493436 5440.989198286389 5085.890635139845 1.0748025443751057 0.8636271586691208 1.0898686016608345 1.0625738405622416 1.1793299750337676 1.100531328599411 1.0869686809256414 1.052788104467457 1.1235025298134913 1.0698203301292146 1.0 12.31228472391429 -5.80581102727549 24.99993731738018 1.0736903506468245 0.9692139207159456 0.3254275112788396 0.06259739160093487 112.17913867902399 63203.90919448029 0.009259518927973824 0.0287892228981952 1.5638279564760843e-06 5.80581102727549 -0.10447642993087891 DRQAFS(ph)MYEPGSALKPFGGPPGDELTTR ddPTM_A549_PD325901_60min_R1 4 DRQAFSMYEPGSALKPFGGPPGDELTTR 28 2 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QQI0 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 DRQAFS(0.997)MY(0.001)EPGS(0.002)ALKPFGGPPGDELTTR;DRQAFS(0.999)MYEPGSALKPFGGPPGDELTTR;DRQAFS(0.994)MY(0.005)EPGS(0.001)ALKPFGGPPGDELTTR;DRQAFS(0.993)MY(0.006)EPGS(0.001)ALKPFGGPPGDELTTR 92.405 5.658200000000001e-10 48667400.0 7985.6 7879.380000000001 8913.7 8738.5 8590.4 9335.5 8466.599999999999 9574.3 8645.8 8676.699999999999 10048.099999999999 True False 8796.292233311984 8543.40300528652 9518.637284432483 9278.257298426575 7987.039939271165 9259.47478317516 8788.801096101288 9383.333075606952 8282.447092579392 8128.851681225112 8812.247400153918 0.9981894327159204 0.9694919601482476 1.0801600150565709 1.0528820716341347 0.9063567528904898 1.050750661291401 0.997339350226116 1.0648059058626815 0.9398790928673574 0.922449326727156 1.0 13.10529428332831 -8.778448479777342 24.97684681444259 0.9716095767701924 1.0138969865909941 0.20279284198582992 0.050585398149008934 358.7509602531747 526802.5360634046 0.008529971051593734 0.009091640176909487 1.6655263969572887e-09 8.778448479777342 0.0422874098208017 DRQQGS(ph)EEEPSPVLK ddPTM_A549_MK2206_60min_R1 2 DRQQGSEEEPSPVLK 15 1 Q9HCH5-13;Q9HCH5;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6 Q9HCH5-13 SYTL2 Synaptotagmin-like protein 2 1 DRQQGS(0.999)EEEPS(0.001)PVLK;DRQQGS(1)EEEPSPVLK 96.14299999999999 4.974e-06 8749900.0 2711.2 2745.5 2232.7 2394.0 3335.6 2785.2 1896.9299999999998 2337.46 3537.6 3852.8 3589.7 True False 3168.7842775240433 2885.2342230213562 2549.330432858289 2980.530107470746 2844.9376586426 3079.92801533387 2241.577626740365 2668.8021131710266 2736.3392483863686 2982.4498041141896 2698.278419320066 1.174372612861255 1.0692870692522534 0.9447988816145555 1.1046043603690845 1.0543528934124933 1.1414418887543767 0.8307436366426618 0.9890758841126309 1.0141055974038045 1.1053158127639517 1.0 11.397823503759405 DRQS(ph)LDGFYSHGMGAEGR ddPTM_A549_MK2206_60min_R1 4 DRQSLDGFYSHGMGAEGR 18 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 DRQS(0.999)LDGFYS(0.001)HGMGAEGR;DRQS(1)LDGFYSHGMGAEGR;DRQS(0.996)LDGFYS(0.004)HGMGAEGR;DRQS(0.997)LDGFY(0.001)S(0.002)HGMGAEGR 80.786 8.0206e-05 28673100.0 1823.7199999999998 2463.7999999999997 1663.1400000000003 1643.95 2518.75 1934.3 1862.3500000000001 2342.08 3106.7599999999998 2835.0800000000004 2819.77 True False 2131.519350326845 2589.1968962593405 1898.9982604487536 2046.717823799719 2148.2452115679503 2138.9863421155756 2200.7148883511345 2674.0770123191837 2403.0838204762667 2194.633458951426 2119.543287307057 1.0056503035779014 1.2215824568268159 0.8959469107429683 0.9656409642853461 1.0135415607847102 1.0091732284615056 1.0382967413452584 1.2616288746415167 1.1337743535917382 1.0354275244549371 1.0 11.049537715431368 -8.015601378213038 24.889320392510758 1.083160724660579 1.0199494913741962 0.14079914748945488 0.09674255883195573 1464.1959506387714 2335873.8274206794 0.01663620291270627 0.021831039828184455 9.647140904166822e-09 8.015601378213038 -0.06321123328638278 DRQS(ph)LDGFYSHGMGAEGR ddPTM_A549_PD325901_60min_R1 3 DRQSLDGFYSHGMGAEGR 18 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 DRQS(0.936)LDGFYS(0.064)HGMGAEGR;DRQS(0.999)LDGFYSHGMGAEGR;DRQS(0.977)LDGFY(0.004)S(0.019)HGMGAEGR 63.268 0.00082452 28142000.0 2547.53 2918.8199999999997 2880.64 2772.17 3177.39 2597.7799999999997 2505.76 3033.45 3287.45 3485.16 4397.8 True False 2806.1533702075358 3164.7992049996806 3076.137553095525 2943.400644845133 2954.2210878004307 2576.624540971214 2601.1180680044845 2972.9454600545096 3149.289908915324 3265.106402818872 3856.8984799511245 0.7275673406480473 0.8205554855671974 0.7975676749299625 0.763152221959037 0.7659576997312793 0.6680560959447047 0.6744066719737581 0.7708124741961534 0.816534302182419 0.8465627031127478 1.0 11.913225456970837 -9.939998158454237 0.7001128782596006 0.9903934309899057 0.7491226088361462 0.49129201031331515 0.06182590510780279 0.2312070845113143 0.23056532985279843 0.026709223223986608 0.011577979057734306 1.1481584900411711e-10 9.939998158454237 -0.2412708221537595 DRQS(ph)PPPAK ddPTM_A549_MK2206_60min_R1 1 DRQSPPPAK 9 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DRQS(1)PPPAK 45.257 0.013634 10044000.0 2120.5 2004.4 2173.1 1969.1 2125.8 1818.5 1448.0 2070.6 2433.7 2872.5 2794.5 True False 2478.3885587524833 2106.415398515392 2481.2782566598057 2451.529588396258 1813.097636030232 2010.9324629773964 1711.082856784409 2364.1138909465535 1882.4708358203036 2223.6002549621066 2100.5485257235787 1.1798768409307514 1.0027930194042018 1.1812525282200166 1.167090194953614 0.8631543684074958 0.9573368281433479 0.8145885876142709 1.1254745424803667 0.8961805989089666 1.0585807600879586 1.0 11.03655039922354 -6.752503082124 24.999923404586728 0.9482752625052513 1.1269345451930626 0.43806078158486195 0.09387272142870506 124.61855035261547 348626.53600754286 0.012101794862294936 0.02490273353370012 1.7680596700306156e-07 6.752503082124 0.17865928268781128 DRQS(ph)PPPAK ddPTM_A549_PD325901_60min_R1 2 DRQSPPPAK 9 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DRQS(1)PPPAK;DRQS(1)PPPAK 66.267 0.0015185 28263000.0 8730.7 8829.9 8525.2 8655.3 10433.099999999999 8051.299999999999 7509.0 7866.9 7670.6 9627.4 10340.2 True False 9617.034236798356 9574.026661536747 9103.77133819219 9189.91822338748 9700.315048241057 7985.7328822000045 7794.759104082465 7709.988508036339 7348.23135723004 9019.524320977642 9068.420951928381 1.060497112758458 1.0557545478191381 1.0038981854119036 1.013397842039221 1.0696807194617828 0.8806089753146996 0.8595497656540663 0.8502018762590444 0.8103099090991639 0.9946080325108484 1.0 13.146635646535216 -7.265204050501867 24.924925371990224 0.8972169120075196 1.0379297682193172 0.6082136538170737 0.056490039708104095 218.59483976407688 1447261.131914 0.011023658779257354 0.01803388324278749 5.429951487298735e-08 7.265204050501867 0.14071285621179752 DRRPLLTAPDHCS(ph)DDA ddPTM_A549_PD325901_60min_R1 1 DRRPLLTAPDHCSDDA 16 2 Q9GZR2;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 DRRPLLT(0.001)APDHCS(0.999)DDA 51.684 0.0061792 10499000.0 3200.4 2912.6 3158.2 3528.6 4036.5 3773.1 3255.7 3474.5 3604.4 3103.2 4035.2 True False 3525.302251990043 3158.055023770589 3372.5344437993945 3746.55360796796 3752.990165169031 3742.373124567316 3379.5974450873973 3405.198371807478 3452.9196026386376 2907.2634224045737 3538.8959812403436 0.9961587655239484 0.892384246530955 0.9529905545902365 1.0586786466255034 1.060497450352765 1.0574973507007843 0.9549863751301574 0.9622205314477749 0.9757053106230118 0.8215170600706976 1.0 11.789083641917133 -6.020828017861356 24.237158589730257 0.9981242704695558 0.9388754738875225 0.04186925567789912 0.06833833597035797 530.3045227838795 617107.2935597344 0.006233837270625298 0.016712969352133143 9.531735493657124e-07 6.020828017861356 -0.0592487965820333 DRRPVHLDQAAFR ddPTM_A549_MK2206_60min_R1 2 DRRPVHLDQAAFR 13 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ; 95.094 5.0488e-05 17042400.0 144.92 0.0 151.55 183.1 272.1 325.34000000000003 80.533 209.95600000000002 329.9 346.53 326.92 False True 169.378953046173 0.0 173.0420688402712 227.95950821967128 232.07445044869053 359.76726285678643 95.16480366396326 239.71790596328333 255.1781767420463 268.2486323244626 245.7367414670073 0.6892699562751948 0.0 0.7041766233540778 0.92765740629094 0.9444027338494229 1.4640352952881037 0.3872632276958068 0.9755069776387831 1.0384209346094329 1.0916097882761164 1.0 7.940969768961914 -6.030859830236485 3.6501612027490067 0.9906260575012793 0.33927865741549784 0.431632724776856 0.27898555844656237 0.13314019942588437 3.7297930410618765 0.03509079862555111 0.1096698374607304 9.314084416508295e-07 6.030859830236485 -0.6513474000857815 DRRPVHLDQAAFR ddPTM_A549_PD325901_60min_R1 4 DRRPVHLDQAAFR 13 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ;;; 134.08 9.1432e-09 32004200.0 2294.7699999999995 3072.9999999999995 2880.7799999999997 2658.6000000000004 3296.36 2967.55 2642.1499999999996 2846.04 2302.241 3413.2599999999998 2970.28 False True 2527.7333610796118 3331.972494694437 3076.287054337412 2822.815683881318 3064.8350454246483 2943.3832566880683 2742.6984640899564 2789.2734995248106 2205.485817028738 3197.746181089404 2604.9543901562665 0.970356091696476 1.2790905312144671 1.1809370121650655 1.083633438861086 1.1765407705433162 1.1299173865809988 1.0528777296271306 1.070757134967529 0.8466504539822038 1.2275632130732153 1.0 11.347042397407169 -8.3454248501051 1.861744769141663 0.9291449927251519 1.140798638726239 0.0 0.12258084200916715 0.19545319643706904 1.319863804770802 0.015593813343532692 0.019510698062142173 4.5141413084541815e-09 8.3454248501051 0.21165364600108705 DRS(ph)FSEGGER ddPTM_A549_MK2206_60min_R1 1 DRSFSEGGER 10 1 Q07352;G3V2D5;G3V2P5;G3V515 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 DRS(0.587)FS(0.413)EGGER 49.298 0.0082113 12677000.0 378.95 549.91 298.38 490.58 651.7 325.37 357.87 395.78 659.59 606.69 613.65 True False 442.90749556201524 577.8980701444821 340.6947707064344 610.7721220229728 555.8357933017701 359.8004374368741 422.89034665568806 451.8830270254158 510.1939181487921 469.6383076354956 461.26376912158634 0.9602043889236562 1.2528581450153993 0.7386116003761598 1.3241276746840633 1.205028078316845 0.780031863595237 0.9168080715748059 0.979662954855451 1.1060784572791973 1.0181556390822921 1.0 8.849448167282585 -4.9566289540304656 16.63494862995735 1.0402747045927878 0.5385860476302049 0.011850571954835742 0.17503093212129062 20860636.112730976 207309160.99195817 0.02217259247970894 328161775.2346717 1.1050223090119561e-05 4.9566289540304656 -0.5016886569625829 DRS(ph)FSEGGER ddPTM_A549_PD325901_60min_R1 2 DRSFSEGGER 10 1 Q07352;G3V2D5;G3V2P5;G3V515 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 DRS(0.941)FS(0.059)EGGER;DRS(0.5)FS(0.5)EGGER 96.464 0.0001494 18132500.0 1311.73 1552.31 1433.31 1427.58 1454.0 1781.46 1397.8899999999999 1823.44 1932.02 2229.46 2254.25 True False 1444.8958639554114 1683.128611532419 1530.5830357932077 1515.7583743305838 1351.8760560276905 1766.95238040118 1451.0874689047591 1787.0700587389929 1850.8239181805307 2088.691515117977 1976.9915408681222 0.7308558656355906 0.8513585297352034 0.7741980702259905 0.766699473921368 0.6838046739613587 0.8937581895900721 0.7339876974220982 0.9039340947074905 0.936182011870324 1.0564999758171985 1.0 10.949090982753123 -8.575195725109335 1.0678995812661485 0.9797815011812746 0.7737643225110096 0.7117777339385705 0.061707066717347624 0.17178429223760655 0.38332972828787626 0.011280928612862453 0.012927478007837978 2.6595262111057524e-09 8.575195725109335 -0.20601717867026503 DRS(ph)FSENGDR ddPTM_A549_MK2206_60min_R1 2 DRSFSENGDR 10 1 P47974 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 1 DRS(0.611)FS(0.389)ENGDR;DRS(0.706)FS(0.294)ENGDR 96.464 0.0001494 41362000.0 1242.54 1248.67 1117.57 983.0 1523.65 1202.99 1343.67 1239.95 1337.45 1817.2800000000002 1391.9099999999999 True False 1452.2503748136344 1312.2219694992093 1276.0582307741472 1223.8350441285468 1299.5231033669504 1330.289603319867 1587.797446253803 1415.7167096876158 1034.5197104687782 1406.7551858442257 1046.2603322382918 1.3880392193659847 1.2542021608445566 1.2196373994646657 1.1697232576048877 1.2420647742487254 1.2714709354161828 1.5175930858976434 1.3531208878567884 0.988778489055017 1.3445555972046823 1.0 10.031026154697292 -8.767218022315419 24.950211340436816 0.9947009266039404 1.297408232581286 0.1553566293623745 0.13824053005792558 56.308997562251186 243122.43481203332 0.016545977009519586 0.017847303111298167 1.7091570773078463e-09 8.767218022315419 0.3027073059773455 DRS(ph)FSENGDR ddPTM_A549_PD325901_60min_R1 2 DRSFSENGDR 10 1 P47974 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 1 DRS(0.897)FS(0.103)ENGDR;DRS(0.99)FS(0.01)ENGDR 96.734 0.00014783 34783000.0 1644.44 1767.8600000000001 1833.51 1664.83 2159.2 1881.6799999999998 1630.79 1877.6999999999998 2059.97 2169.09 2412.66 True False 1811.3823382272542 1916.8437665052093 1957.9430143913073 1767.662767996741 2007.545240835619 1866.356221949016 1692.8506058525286 1840.2478004728455 1973.396624638641 2032.1332872207843 2115.918115111848 0.856073930881538 0.905915854122684 0.9253396907979164 0.8354117086914311 0.9487821038525869 0.8820550325740559 0.8000548763027364 0.869715981601476 0.932643191881897 0.9604026132709608 1.0 11.047068081675505 -9.39927730017486 1.1161652776872135 0.9844261740592811 0.8801288682465002 0.4669466707218567 0.041228005672122266 0.23858196038287044 0.6207369837188556 0.010810367454900808 0.008492534223004552 3.9877020339170745e-10 9.39927730017486 -0.10429730581278096 DRS(ph)ILTLSK ddPTM_A549_MK2206_60min_R1 2 DRSILTLSK 9 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 DRS(1)ILTLSK;DRS(1)ILTLSK 53.967 0.005786100000000001 4357500.0 1189.1 1176.74 1215.18 1148.03 1451.8 1319.06 1064.43 1325.74 1956.89 1754.85 1550.99 True False 1389.7910092961924 1236.6310397370808 1387.5107965247169 1429.2974015370253 1238.242143187831 1458.6420536788353 1257.8231527949083 1513.6677049084717 1513.6575395111959 1358.4281662037447 1165.8363778536452 1.192097824100203 1.0607243548307967 1.1901419640714794 1.2259845624035366 1.062106284131816 1.2511550346063638 1.0789019597335046 1.2983534685160527 1.2983447491129967 1.165196241950066 1.0 10.187149608858011 -11.03182228586841 1.35552325343482 1.001044930290821 1.194010569348057 0.05187930195922019 0.09475365207570655 0.3461145355607313 1.1432761763667674 0.05996518166654251 0.013796555504405422 9.293465993864882e-12 11.03182228586841 0.19296563905723585 DRS(ph)ILTLSK ddPTM_A549_PD325901_60min_R1 3 DRSILTLSK 9 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 DRS(0.998)ILT(0.002)LSK;DRS(1)ILTLSK;DRS(1)ILTLSK 67.456 0.0013682 5780300.0 2183.0299999999997 2293.25 2148.8900000000003 1992.41 2310.3199999999997 2338.5699999999997 2554.99 2599.1099999999997 2308.2200000000003 1960.3899999999999 2684.69 True False 2404.649598538254 2486.5102256615764 2294.7265977253105 2115.476640608581 2148.0510933713153 2319.525461270412 2652.2215425941736 2547.268712087651 2211.2135404512705 1836.6106408377495 2354.490149652095 1.0213037412339867 1.0560716195941566 0.9746172002734369 0.8984860866464736 0.9123211212791509 0.9851497835372768 1.1264525965360577 1.081876988300011 0.9391475011173882 0.780046007459038 1.0 11.20119897159012 -9.731366864699508 0.00197402217310143 2.013379369125489e-05 1.9697843483405484 0.026353415033466554 0.09055769388073856 426306.28071567125 330.7847054685223 165867.4157353433 164200.11014129157 1.856235761240317e-10 9.731366864699508 1.9697642145468572 DRS(ph)LPR ddPTM_A549_MK2206_60min_R1 1 DRSLPR 6 1 Q14D04-2;Q14D04 Q14D04-2 VEPH1 Ventricular zone-expressed PH domain-containing protein homolog 1 1 DRS(1)LPR 60.589 0.05285599999999999 184850000.0 1432.2 1494.9 1374.8 1269.0 2034.6 1321.2 1393.4 1409.0 2025.7 2063.2 1894.7 True False 1673.9203460718265 1570.9840247658465 1569.767312712668 1579.9050569675746 1735.313035218322 1461.0085070584198 1646.5627435382567 1608.7300648815276 1566.8821843781857 1597.1216870453688 1424.1936989402266 1.1753459851124373 1.1030690740556217 1.1022147576420018 1.1093329918136952 1.218452965007222 1.025849579411556 1.1561367985011446 1.1295725195797583 1.1001889599315997 1.1214216775666273 1.0 10.475929659545251 -10.305537690576086 0.4975711438902064 0.9852914723726751 1.129502702380632 0.013775978934140731 0.05834626831386977 0.724398713093005 0.29813307308853804 0.04828752985132717 0.01132623219422336 4.9483716423802975e-11 10.305537690576086 0.144211230007957 DRS(ph)NTLNEKPALPVIR ddPTM_A549_PD325901_60min_R1 2 DRSNTLNEKPALPVIR 16 2 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 DRS(0.5)NT(0.5)LNEKPALPVIR;DRS(0.5)NT(0.5)LNEKPALPVIR 77.391 8.6029e-05 11927400.0 1682.15 1632.8600000000001 1890.99 1929.02 2086.22 1748.72 1836.63 2191.7 1773.9 1934.0299999999997 2260.7 True False 1852.9206296666198 1770.4668427226686 2019.3239528466263 2048.1711842777163 1939.6911042682862 1734.4790041062677 1906.5239596924998 2147.9848241446125 1699.3491519034192 1811.9150157363742 1982.6482317580412 0.9345685230423401 0.8929808194733423 1.0184983500860685 1.0330481986013096 0.9783334598635964 0.8748294207330372 0.9616047512381756 1.083391793732348 0.8571107696681943 0.9138862793273845 1.0 10.953213017036592 DRS(ph)PAPSPVLPSSSLR ddPTM_A549_MK2206_60min_R1 2 DRSPAPSPVLPSSSLR 16 1 E9PEZ1;Q8IWT3-3;Q8IWT3 E9PEZ1 CUL9 Cullin-9 1 DRS(1)PAPSPVLPSSSLR;DRS(1)PAPSPVLPSSSLR 77.66 0.00011354 4947000.0 841.09 985.0 764.97 835.84 917.82 671.3599999999999 761.15 848.7 1238.99 1408.4299999999998 928.28 True False 983.0454293238035 1035.1322927248366 873.4542487676822 1040.6208375222836 782.8098938288024 742.4028695872995 899.4411025148153 969.005824034743 958.3607432604671 1090.2646848028833 697.762456775338 1.4088540014991369 1.4835024193027386 1.251793128573142 1.4913683409271437 1.1218859458941162 1.0639765186253558 1.2890362526403634 1.3887331062679094 1.3734770822859492 1.5625155441028853 1.0 9.44659216494939 -10.781584373533473 0.9059420007456358 0.9892348225108581 1.317864832959805 0.0 0.2099725685145841 0.4882852984608399 0.6735873838425005 0.11022499576640316 0.024429207841836175 1.6535435076943404e-11 10.781584373533473 0.3286300104489469 DRS(ph)PHRS(ph)SPSDTRPK ddPTM_A549_MK2206_60min_R1 1 DRSPHRSSPSDTRPK 15 3 A0A0D9SGE8;Q8IWS0-3;Q5JRC6;Q8IWS0-2;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 2 DRS(0.998)PHRS(0.449)S(0.315)PS(0.036)DT(0.201)RPK 60.034 0.0017525 11613000.0 587.77 378.11 319.44 540.69 517.4 542.19 350.71 203.42 415.94 343.86 559.61 True False 686.9712064031819 397.3541839616118 364.74139538328114 673.1590742724964 441.29114539563557 599.564185923406 414.4294673362294 232.2554079476228 321.73025411969314 266.1817871788582 420.6433925497123 1.633143937526594 0.9446343173324703 0.8671035890339711 1.6003082092700205 1.049086121906653 1.4253503003795513 0.9852275696622322 0.5521432454693188 0.7648527465736207 0.6327967867637441 1.0 8.716453872434109 -7.971905363074961 9.900620792191711 0.8562296913137103 1.2265638080064802 0.434648958173388 0.26217976191029946 0.3291528741427996 111.35223811441149 0.03911124210305378 0.05394330613743235 1.0668285680607052e-08 7.971905363074961 0.37033411669276994 DRS(ph)PHRSSPSDT(ph)RPK ddPTM_A549_MK2206_60min_R1 1 DRSPHRSSPSDTRPK 15 3 A0A0D9SGE8;Q8IWS0-3;Q5JRC6;Q8IWS0-2;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 2 DRS(0.997)PHRS(0.148)S(0.133)PS(0.106)DT(0.616)RPK 58.997 0.0024173000000000003 8157200.0 199.67 325.05 451.34 158.93 477.84 291.71 398.7 267.13 462.5 566.15 461.31 True False 233.36941453718853 341.5936565991961 515.346798748717 197.8678571346388 407.5503689908206 322.5785585785737 471.13862914360755 304.9964955513148 357.744488460735 438.25632179174823 346.7539954916957 0.6730114651058935 0.9851181559272812 1.486202914599318 0.5706289176396165 1.1753299869347311 0.9302807257380225 1.358711464811054 0.8795760092651017 1.03169536072239 1.2638825435026426 1.0 8.437768695951132 -5.281144403652655 5.221978968748007 1.0339716830505232 0.6617335541219097 0.17197119626766666 0.24010979580496586 0.1716307633556931 14.750565854982082 0.0271809059029382 0.21493565207260443 5.234263674922625e-06 5.281144403652655 -0.3722381289286135 DRS(ph)PIRGS(ph)PR ddPTM_A549_MK2206_60min_R1 4 DRSPIRGSPR 10 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 2 DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR 58.885 0.0085215 647922000.0 4999.01 5282.35 4771.02 4485.18 5482.63 4806.4 3797.4 3551.16 6629.25 7320.35 6648.5 True False 5842.720673939752 5551.199052258921 5447.622377290077 5584.049301347383 4676.142389796043 5315.010057769891 4487.3384256582285 4054.5478049713915 5127.735459736926 5666.677850796121 4997.493960734735 1.169130111981316 1.1107965504059918 1.090070827517151 1.1173698948355333 0.9356974568726749 1.063535063679892 0.8979177285485898 0.8113161990445485 1.0260613619597136 1.1339038916943487 1.0 12.286989108195609 -6.7460592655252 24.527797159730312 0.9878321730243962 1.1187836043631705 0.4030274596498642 0.08205481504072001 148.32055886844967 236535.83869028962 0.010560374258337406 0.021915643975138413 1.7944887271660533e-07 6.7460592655252 0.1309514313387743 DRS(ph)PIRGS(ph)PR ddPTM_A549_PD325901_60min_R1 4 DRSPIRGSPR 10 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 2 DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR 56.482 0.0049873999999999995 1061821000.0 7287.370000000001 6853.43 6446.2300000000005 6935.570000000001 7253.19 6991.08 7677.1900000000005 7613.99 8007.029999999999 7695.939999999999 8469.32 True False 8027.1784377217455 7430.992598214675 6883.709932129997 7363.964407077692 6743.750956547105 6934.146962365189 7969.349666569561 7462.122996390398 7670.522374296877 7210.017035002658 7427.647331442921 1.0807161513634167 1.0004503803994023 0.9267685479613021 0.9914262320862159 0.9079255726102223 0.9335589929009375 1.0729305405809306 1.0046415322926727 1.0326987849605904 0.97069996908456 1.0 12.858689601650948 -7.748431445264151 24.999839559177005 1.018771274087225 0.9704140244216847 0.15489275313815387 0.049238155583443854 295.9268392761389 568737.1590214254 0.007224166403004895 0.010678403690762629 1.7847136889174287e-08 7.748431445264151 -0.048357249665540336 DRS(ph)PIRGSPR ddPTM_A549_MK2206_60min_R1 1 DRSPIRGSPR 10 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 DRS(0.996)PIRGS(0.004)PR 40.475 0.032496 8382800.0 862.37 934.73 808.12 866.02 810.43 589.18 794.04 482.86 820.62 1097.8 1559.3 True False 1007.9169730777547 982.3037644453664 922.7235676093694 1078.1949388771154 691.216820570129 651.5266365339686 938.3067897797595 551.3068836967313 634.7508802608615 849.806217544787 1172.0827755093128 0.8599366820656313 0.8380839518936872 0.7872511966643416 0.919896581884842 0.5897337927091114 0.5558708396263706 0.8005465222983341 0.4703651441828999 0.5415580652868472 0.7250394215336158 1.0 10.194858744865785 -6.740609223560427 24.997345714283316 0.7273918304533071 0.845774286722885 0.20305958899496623 0.14703657667098544 563.9092997943704 676719.0801781049 0.02898818764710214 0.06029284196542843 1.8171499916835667e-07 6.740609223560427 0.11838245626957788 DRS(ph)PIRGSPR ddPTM_A549_PD325901_60min_R1 2 DRSPIRGSPR 10 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 DRS(0.996)PIRGS(0.004)PR;DRS(0.997)PIRGS(0.003)PR 45.28 0.01566 24320000.0 3572.5 3054.2 3650.5 3814.9 4125.2 3851.7999999999997 3310.7 3420.8 4165.4 4110.2 4542.7 True False 3935.1775700644994 3311.588152715832 3898.244882239783 4050.5377087334823 3835.460183167421 3820.4322178602197 3436.690500184552 3352.569460434314 3990.3427235686913 3850.681270548878 3983.9766985479027 0.9877511511296766 0.8312267875268583 0.9784808439418413 1.0167071785861197 0.9627215401549377 0.9589494384474456 0.86262816281962 0.8415133205112051 1.001597907192356 0.9665421165621754 1.0 11.959993494069161 -8.899621360378607 24.09239060423214 1.0007689604175638 0.9304284759381769 0.15974295914089043 0.059093341775446694 10.224918029852624 2437.710089493203 0.01027968005177724 0.0109435198620894 1.2600234844565116e-09 8.899621360378607 -0.0703404844793869 DRS(ph)PLAQMEEER ddPTM_A549_MK2206_60min_R1 1 DRSPLAQMEEER 12 1 A0A0U1RRM2 A0A0U1RRM2 1 DRS(1)PLAQMEEER 45.863 0.012347 1356800.0 107.0 0.0 0.0 0.0 0.0 288.32 128.28 208.29 148.08 156.48 249.46 True False 125.05898410116275 0.0 0.0 0.0 0.0 318.82983102867354 151.5868155167845 237.81574536137222 114.54011643516894 121.13105931992013 187.5121972542508 0.6669378628825583 0.0 0.0 0.0 0.0 1.7003151565461476 0.8084104273560696 1.2682681385196188 0.6108408845524974 0.6459902933976961 1.0 7.550840632561309 -7.216011692366317 24.99900976067462 0.9042251563598456 0.11115606391142031 0.6081306863644487 0.34320895550832853 246.96136112717554 135903.68921432437 0.04970197209117763 0.08608612292772533 6.081186288821413e-08 7.216011692366317 -0.7930690924484253 DRS(ph)PLAQMEEER ddPTM_A549_PD325901_60min_R1 2 DRSPLAQMEEER 12 1 A0A0U1RRM2 A0A0U1RRM2 1 DRS(1)PLAQMEEER;DRS(1)PLAQMEEER 53.448 0.0063282 2947300.0 322.43 433.01 346.55 462.12 486.78999999999996 327.92 360.15 540.44 365.38 463.49 443.40999999999997 True False 355.1628562395794 469.5012723487273 370.06896697444114 490.66410284933215 452.5995497343323 325.24952824152945 373.8557053316422 529.6605002330219 350.02434924317663 434.22516230030186 388.87338100757853 0.9133123365742996 1.20733713151628 0.9516438641688079 1.2617580086814169 1.163873825875245 0.8363892828015165 0.9613815796879045 1.3620384580211204 0.900098505935934 1.1166235168249778 1.0 8.603156673189927 DRS(ph)PLRR ddPTM_A549_MK2206_60min_R1 2 DRSPLRR 7 2 Q96PK6;Q96PK6-5;E9PB51;Q9BWF3;Q9BQ04 Q96PK6;E9PB51;Q9BQ04 RBM14;RBM4;RBM4B RNA-binding protein 14;RNA-binding protein 4;RNA-binding protein 4B 1 DRS(1)PLRR;DRS(1)PLRR 52.57899999999999 0.015425 9081300000.0 2429.26 2830.2 2223.0299999999997 2239.2400000000002 3861.7999999999997 2549.46 2256.55 2734.01 3941.0 3311.1000000000004 3040.5 True False 2839.25969829524 2974.2450912384056 2538.2890814515868 2787.8539005233024 3293.734335695524 2819.2421650054175 2666.5359257436867 3121.564290054468 3048.3697924837975 2563.12021034118 2285.459936468972 1.2423143600066282 1.3013770417842478 1.110625061042739 1.219821820561216 1.4411691419908819 1.2335557145495786 1.1667392996892676 1.3658363641575246 1.3338102076702856 1.1214898889460265 1.0 11.158268813748801 -10.809049158080947 1.02082391064685 0.9977107408530205 1.2705968291627079 0.40303880859564833 0.09379415820934117 0.3258921469884811 0.5948146800109354 0.06477459626285989 0.015592869260184524 1.5522113041853494e-11 10.809049158080947 0.2728860883096874 DRS(ph)PLRR ddPTM_A549_PD325901_60min_R1 1 DRSPLRR 7 2 Q96PK6;Q96PK6-5;E9PB51;Q9BWF3;Q9BQ04 Q96PK6;E9PB51;Q9BQ04 RBM14;RBM4;RBM4B RNA-binding protein 14;RNA-binding protein 4;RNA-binding protein 4B 1 DRS(1)PLRR 46.457 0.020313 5532700000.0 1288.9 1427.4 1527.8 1744.5 1885.1 1329.5 1642.5 1270.4 1654.8 1764.7 1725.0 True False 1419.7481791619693 1547.692007460735 1631.4856954077356 1852.2538029530415 1752.697079241952 1318.6729927943204 1705.0062363104867 1245.0608753904799 1585.2545107220114 1653.276540834414 1512.8359356759493 0.9384680424897579 1.0230402193409107 1.0784287026330932 1.224358675830527 1.1585506649528592 0.8716563122921356 1.1270265308370493 0.8229979510859352 1.047869417521276 1.0928326739513328 1.0 10.563039823029168 -7.22560283751594 24.995534430620317 1.0057648722149783 1.088575899265143 0.14633718577398758 0.10691704049315384 965.9698674454941 673751.7909544905 0.014868794212963783 0.02575276352076135 5.948358876237406e-08 7.22560283751594 0.08281102705016474 DRS(ph)PLRRS(ph)PPR ddPTM_A549_MK2206_60min_R1 7 DRSPLRRSPPR 11 3 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 2 DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR 87.51899999999999 0.00010309999999999999 3058291000.0 16126.7 17346.39 14122.750000000002 10550.680000000002 18315.08 15115.599999999999 14326.6 14344.21 20466.3 23534.300000000003 24701.48 True False 18848.492700039467 18229.247158577833 16125.568312200205 13135.597073638026 15620.955993839763 16715.122759076767 16929.557773485856 16377.545694800765 15830.715727965273 18217.885284718788 18567.42078983376 1.0151379081342091 0.9817867201328745 0.8684872548926912 0.7074540520366821 0.8413099574062932 0.900239346556352 0.9117883396467923 0.882058196460328 0.8526071502959142 0.9811747948693901 1.0 14.180485803215445 -10.825921401417768 0.960625181869382 1.0034126239078818 0.8798810531654618 0.22415829607410842 0.07539435603133617 0.7243812812600758 1.1320228540809236 0.06409360798952318 0.014161655148672351 1.4930645998462286e-11 10.825921401417768 -0.12353157074241994 DRS(ph)PLRRS(ph)PPR ddPTM_A549_PD325901_60min_R1 11 DRSPLRRSPPR 11 3 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 2 DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR;DRS(1)PLRRS(1)PPR 76.391 0.00041417 4276334000.0 26083.12 25712.120000000003 25876.08 25766.34 27149.519999999997 27516.2 24079.260000000006 27291.58 27959.789999999997 28669.920000000002 31418.090000000004 True False 28731.05914102193 27878.970589092987 27632.186394309596 27357.86830219608 25242.63137595936 27292.117190167024 24995.609415976673 26747.228027069687 26784.737259088848 26859.69635836084 27553.864105681856 1.04272341007508 1.0117989434136787 1.0028425156024336 0.9928868124363958 0.9161194698189029 0.9905005368934494 0.9071544129021945 0.9707251195143322 0.9720864252054431 0.9748068820888947 1.0 14.749967033561544 -5.778806467764509 1.4860349964290631 0.9753945536341183 1.0398540423873923 0.39535800120342623 0.02938236550633134 0.5056553244740242 1.8021180752893031 0.004552162782257985 0.03607168673128142 1.664154072887464e-06 5.778806467764509 0.06445948875327401 DRS(ph)PLRRSPPR ddPTM_A549_MK2206_60min_R1 1 DRSPLRRSPPR 11 3 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 DRS(1)PLRRSPPR 95.264 8.402899999999999e-05 11837000.0 692.79 481.31 405.32 443.97 602.83 486.63 511.81 590.21 523.88 885.68 720.28 True False 809.7160149106966 505.8066231587727 462.80047075116306 552.7426699305707 514.1545055640722 538.1248636011494 604.7992520240523 673.8740749423183 405.22201646445393 685.6042728685258 541.4145972832988 1.4955563055995833 0.9342315957065082 0.8547986572090882 1.0209231016380307 0.9496502461218965 0.9939238179046953 1.1170723047712492 1.2446544262450117 0.7484504823064806 1.2663202586497289 1.0 9.080589974897471 -8.772729994474949 24.99986046000204 0.8812127431494707 1.056767717148794 0.0 0.20976883256568216 292.0972372379227 646764.1590281817 0.03165488255963746 0.033845251269575514 1.6876018994600291e-09 8.772729994474949 0.17555497399932318 DRS(ph)PPKSPEK ddPTM_A549_PD325901_60min_R1 1 DRSPPKSPEK 10 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DRS(1)PPKSPEK 70.622 0.0006213999999999999 14644000.0 2591.8 2551.3 2457.0 2818.7 3425.3 2403.5 2855.2 2829.7 3011.3 3130.4 3961.2 True False 2854.917628017685 2766.3070047881297 2623.7467951412536 2992.8046972678344 3184.718744643499 2383.926692877885 2963.856198425389 2773.259413643295 2884.7455330778325 2932.7460097625953 3473.997512115695 0.8217961060884627 0.7962892878133999 0.7552529286480026 0.861487288586223 0.9167302893961998 0.686220034575112 0.8531543813974624 0.7982905583471059 0.8303821528418416 0.8441992256858375 1.0 11.762381005532605 -10.465573797157242 0.5929770331889529 1.0167215836589887 0.8084942849191336 0.13461853749659447 0.07233900485218996 0.511314532611538 0.2916215880168358 0.055005361181561824 0.012194407591798982 3.4231521503336585e-11 10.465573797157242 -0.20822729873985513 DRS(ph)PPKSPEKLPQSSSSESSPPSPQPTK ddPTM_A549_PD325901_60min_R1 1 DRSPPKSPEKLPQSSSSESSPPSPQPTK 28 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DRS(0.595)PPKS(0.056)PEKLPQS(0.056)S(0.056)S(0.056)S(0.056)ES(0.062)S(0.062)PPS(0.001)PQPTK 49.312 0.0018362000000000003 7230300.0 845.32 672.32 837.34 1058.8 776.35 658.37 851.32 899.02 982.36 992.7 1005.1 True False 931.1362641083069 728.9787659072449 894.1669277344643 1124.1996712907312 721.8218542621029 653.0084530018776 883.7174484601787 881.0883408324538 941.0748254489215 930.0207525847583 881.4790718538537 1.0563339435274604 0.8269949783085799 1.0143938254301677 1.2753560545985596 0.81887577063404 0.7408099339539898 1.0025393417470678 0.9995567325034976 1.0676088128442243 1.0550684438018656 1.0 9.783782507146524 -8.195727616159708 3.7174000595614562 1.0307752988293908 0.9555492559352232 0.05913767772845324 0.1355712744289611 0.5893022500133411 16.21939910836389 0.02254168079066131 0.029158834797500754 6.371950360335738e-09 8.195727616159708 -0.07522604289416757 DRS(ph)PSRLDTFLK ddPTM_A549_MK2206_60min_R1 3 DRSPSRLDTFLK 12 2 Q66GS9 Q66GS9 CEP135 Centrosomal protein of 135 kDa 1 DRS(0.996)PS(0.004)RLDTFLK;DRS(0.566)PS(0.429)RLDT(0.005)FLK;DRS(0.996)PS(0.004)RLDTFLK 84.84200000000001 9.1714e-05 69834000.0 4158.66 4450.6 4610.0 3314.37 5763.299999999999 4780.099999999999 3815.88 4647.1 6731.299999999999 5952.7 6691.9 True False 4860.540138524688 4677.116529950414 5263.767320050481 4126.390798787724 4915.526204597346 5285.927009226423 4509.176002449231 5305.840656146879 5206.671297677286 4607.980935670302 5030.1165429556695 0.9662877782288242 0.9298226969513046 1.0464503705032489 0.8203370167568879 0.9772191484273263 1.0508557732382957 0.8964356916867107 1.0548146570435515 1.035099535609939 0.9160783644513089 1.0 12.29637611093472 -7.785348681379318 1.089638847414769 1.0177737075033488 0.950051589584531 0.013958459541045132 0.07151978523207726 0.6103944478568726 1.4632276231758867 0.010993774928158409 0.018182632824536735 1.639273123892266e-08 7.785348681379318 -0.06772211791881788 DRS(ph)PSRLDTFLK ddPTM_A549_PD325901_60min_R1 7 DRSPSRLDTFLK 12 2 Q66GS9 Q66GS9 CEP135 Centrosomal protein of 135 kDa 1 DRS(0.923)PS(0.076)RLDT(0.001)FLK;DRS(0.996)PS(0.004)RLDTFLK;DRS(0.888)PS(0.112)RLDTFLK;DRS(0.973)PS(0.027)RLDTFLK;DRS(0.995)PS(0.005)RLDTFLK;DRS(0.848)PS(0.142)RLDT(0.01)FLK;DRS(0.894)PS(0.102)RLDT(0.003)FLK 106.36 3.0376999999999997e-05 114829500.0 19690.82 18672.68 19901.7 20646.04 23386.499999999996 22308.3 20586.690000000002 24558.0 22637.9 22897.9 23606.43 True False 21689.817550784468 20246.292275376156 21252.349040644156 21921.299000241124 21743.91291904511 22126.628601093296 21370.12775341902 24068.171424621705 21686.50778841785 21452.12268621995 20702.98876348916 1.0476660060326959 0.977940552770892 1.0265353125305183 1.0588470703756803 1.050278931580723 1.0687649427755475 1.0322242840176967 1.1625457415630358 1.04750613721354 1.0361848200416324 1.0 14.337551435342156 -4.857250850189182 19.573520944483693 1.0365352128733178 7.978815886438386 0.0 0.045338464186145434 5021.677426686903 718001.82408418 0.006461789987916293 67063.80890403446 1.3891500209618753e-05 4.857250850189182 6.942280673565068 DRS(ph)SPPPGYIPDELHQVAR ddPTM_A549_MK2206_60min_R1 5 DRSSPPPGYIPDELHQVAR 19 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.62)S(0.38)PPPGYIPDELHQVAR;DRS(0.603)S(0.397)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGY(0.001)IPDELHQVAR 199.46 6.022200000000001e-55 335543300.0 6604.469999999999 8883.800000000001 8198.720000000001 7922.300000000001 9623.8 8179.5 7981.200000000001 8648.3 11684.800000000001 11848.399999999998 12504.0 True False 7719.143072211271 9335.94747422224 9361.421779228693 9863.263855645564 8208.151768570768 9045.049260887325 9431.280729673841 9874.223009307963 9038.211456791349 9171.838210928814 9398.911707156058 0.8212805176512235 0.9933009017537765 0.9960112479938692 1.0494048846246702 0.873308743002801 0.9623507000284605 1.003443911755564 1.050570887030465 0.9616231898327035 0.975840447989914 1.0 13.198278002560409 -7.621469989122212 6.78706195976594 0.9890410286217205 0.9538800229943081 0.1272422556524372 0.0614788095841093 0.4940928864098354 29.51116913289642 0.009219348544592908 0.013701431214740203 2.3907271350972007e-08 7.621469989122212 -0.03516100562741242 DRS(ph)SPPPGYIPDELHQVAR ddPTM_A549_PD325901_60min_R1 3 DRSSPPPGYIPDELHQVAR 19 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.606)S(0.394)PPPGYIPDELHQVAR 203.25 3.277799999999999e-55 376747000.0 11923.099999999999 11794.3 10704.9 12766.8 14006.4 12143.400000000001 11748.699999999999 13366.4 13529.9 13501.5 14690.6 True False 13133.524334677693 12788.247053099445 11431.398887793088 13555.376240493497 13022.638783456847 12044.508176531444 12195.80320763533 13099.796666262044 12961.285354494652 12649.0129858196 12883.749331386154 1.0193868257497887 0.9925873846323557 0.8872726869922104 1.0521297715309619 1.0107802044651975 0.9348604871712126 0.9466035774171021 1.0167689800009982 1.0060181257112486 0.9817804321142206 1.0 13.653264876313882 -8.28962122810495 24.864091013707966 1.0039658294331464 0.9772497357495799 0.06338729815862332 0.042905867437496976 1352.2678028219766 1193066.4721100063 0.006811731034718778 0.008235492271833296 5.133088734767522e-09 8.28962122810495 -0.026716093683566533 DRS(ph)SSAPNVHINTIEPVNIDDLIR ddPTM_A549_MK2206_60min_R1 2 DRSSSAPNVHINTIEPVNIDDLIR 24 1 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINT(0.001)IEPVNIDDLIR 118.55 3.1167e-16 4094000.0 0.0 251.12 185.54 0.0 166.48 245.08 253.05 151.49 330.345 191.23 334.20000000000005 True False 0.0 263.9009353797572 211.85236194407076 0.0 141.99101253472242 271.0142029290625 299.0259094677452 172.96417141866766 255.5223849525654 148.03101018499697 251.2089165492288 0.0 1.0505237592871874 0.8433313787353347 0.0 0.565230782749293 1.078839902069927 1.1903475146318931 0.6885271979777529 1.01717084115719 0.5892745059309537 1.0 7.972743862734571 -7.223377466762882 6.913951127448018 1.0012686454463116 0.5132262063943109 0.280887778938557 0.33523007460694726 0.1869290718728168 27.198753162619663 0.04365870458772968 0.0753723042314869 5.978917119773863e-08 7.223377466762882 -0.4880424390520006 DRS(ph)SSAPNVHINTIEPVNIDDLIR ddPTM_A549_PD325901_60min_R1 4 DRSSSAPNVHINTIEPVNIDDLIR 24 1 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.332)S(0.332)S(0.332)APNVHINT(0.005)IEPVNIDDLIR;DRS(0.33)S(0.33)S(0.33)APNVHINT(0.009)IEPVNIDDLIR 98.839 1.6425e-08 14533000.0 1639.62 1482.15 1612.25 1930.29 1688.871 1794.17 1945.106 2083.19 2087.7200000000003 2015.9300000000003 2131.27 True False 1806.0730153755517 1607.0559821058773 1721.6669802468402 2049.519629293338 1570.2505272486526 1779.558874375167 2019.1280732328448 2041.639141219061 1999.9803886418663 1888.6438357592351 1869.1373012336694 0.9662602175792575 0.859784875645672 0.9211024674915558 1.0965056595578144 0.840093729985622 0.9520749883920359 1.0802459893664196 1.0922895497679794 1.0700018598536543 1.010436116444036 1.0 10.868156833698835 -7.672986757198723 6.532563728566328 1.042394070042453 0.9364744502935098 0.40396719793169067 0.06708052408322487 0.18269252791349508 11.207553995687489 0.010367678119391979 0.01539280867958819 2.1233092063944967e-08 7.672986757198723 -0.10591961974894315 DRSDEKS(ph)KDR ddPTM_A549_PD325901_60min_R1 1 DRSDEKSKDR 10 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;H3BTV0;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 DRS(0.001)DEKS(0.999)KDR 44.511 0.016469 17524000.0 2085.2 2280.8 1922.7 1960.7 1876.2 1862.8 1104.0 1456.7 1870.9 2319.0 2482.9 True False 2296.887968956893 2473.011020468296 2053.1859841343457 2081.8079859272157 1744.4221845386191 1847.6299744093712 1146.0133241319797 1427.6449757409575 1792.2725792300057 2172.5779442369853 2177.519040399892 1.054818776020934 1.1357012152757746 0.9429015067336848 0.956045824308797 0.801105364487772 0.848502327708722 0.5262931358439553 0.6556291583465449 0.8230800952724906 0.9977308597209789 1.0 11.088469618581705 -6.09400165105916 1.6699402853666825 0.8542386105048195 1.097549257909887 0.35538021228989203 0.13683402512156873 0.4356867333918219 2.24917275020981 0.023110416262880733 0.10065646814475065 8.053753793942767e-07 6.09400165105916 0.24331064740506758 DRSFS(ph)EGGER ddPTM_A549_PD325901_60min_R1 1 DRSFSEGGER 10 1 Q07352;G3V2D5;G3V2P5;G3V515 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 DRS(0.073)FS(0.927)EGGER 79.492 0.0010435000000000002 7081400.0 448.27 866.37 694.03 630.61 727.66 657.53 637.34 756.16 880.64 823.62 965.71 True False 493.7780404010675 939.3820404257799 741.1310493414264 669.5613474807783 676.551671890722 652.1752936833768 661.5943224658304 741.0777956039557 843.6297633080928 771.6164926401314 846.9337921400705 0.5830184661227968 1.1091564053101566 0.8750755445342464 0.7905710619821893 0.7988247465969928 0.7700428294819018 0.7811641578193308 0.8750126662573787 0.9960988345693128 0.9110706170908307 1.0 9.726105383081226 -8.668547346787788 3.5214158686818453 0.9987205935837773 0.8256943323346575 0.2276117074420253 0.11932265786833415 0.20074877477897468 4.871996393577306 0.019004073002695184 0.021355157009278685 2.1451252414969722e-09 8.668547346787788 -0.1730262612491198 DRSPPKSPEKLPQS(ph)SSSESSPPSPQPTK ddPTM_A549_PD325901_60min_R1 1 DRSPPKSPEKLPQSSSSESSPPSPQPTK 28 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DRS(0.152)PPKS(0.044)PEKLPQS(0.197)S(0.197)S(0.197)S(0.197)ES(0.017)S(0.001)PPSPQPTK 78.642 9.836399999999998e-07 8697200.0 965.02 866.27 755.75 839.64 1080.6 1090.9 924.67 1137.4 1075.1 1265.1 1108.1 True False 1062.9881199898234 939.2736130748299 807.039739693937 891.5026558392046 1004.7023838676217 1082.0160720867427 959.8588228488389 1114.713664726962 1029.9172857609592 1185.221370096683 971.8107248246488 1.0938221742527348 0.9665190855393267 0.830449509434625 0.917362438040664 1.0338457460931065 1.1134020694019189 0.9877014096773151 1.1470481198158193 1.0597920556462217 1.2196010394004877 1.0 9.924531543783697 -6.801105082778144 8.753732348419565 1.0418174322689835 0.9444313113852294 0.25915799878144774 0.09014814008229834 0.2807180031689053 57.2112862554626 0.010677931476869315 0.020314162498329055 1.5808654835552978e-07 6.801105082778144 -0.09738612088375409 DRSS(ph)PPPGYIPDELHQVAR ddPTM_A549_PD325901_60min_R1 1 DRSSPPPGYIPDELHQVAR 19 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 DRS(0.432)S(0.568)PPPGYIPDELHQVAR 198.56 6.677e-55 190220000.0 1751.8 1860.6 1693.6 2318.5 2128.0 2059.7 2278.1 2249.6 2575.7 2321.4 2237.0 True False 1929.6414463929991 2017.3992917762675 1808.53788044413 2461.7084793044573 1978.536621201461 2042.9264860913588 2364.794342124153 2204.7299632229397 2467.4522862380277 2174.8264078273983 1961.8631815113608 0.9835759519715646 1.0283078406222617 0.9218470979463952 1.2547809156640732 1.008498778022459 1.0413195503865613 1.2053818861631247 1.123793944450541 1.2577086462967189 1.1085515179259222 1.0 10.938008717535393 -6.242236185091973 24.768686346023415 1.1235549156248408 0.982950051905869 0.3615545325463069 0.0869670779105112 803.5093142782877 1036381.391200223 0.014959812155598185 0.03950943849299289 5.724846084168619e-07 6.242236185091973 -0.14060486371897174 DRSWVIGS(ph)PEILR ddPTM_A549_PD325901_60min_R1 2 DRSWVIGSPEILR 13 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 DRS(0.008)WVIGS(0.992)PEILR;DRS(0.046)WVIGS(0.954)PEILR 89.866 5.2035e-05 4655900.0 667.63 646.04 793.05 873.6 540.04 796.0699999999999 683.78 651.54 915.37 838.49 1229.51 True False 735.4073061167707 700.4840580775773 846.8711419970575 927.5602879104489 502.1094534368599 789.5870698561667 709.8016220787733 638.5445235767576 876.9001821849217 785.5475983024015 1078.2880645060497 0.6820137682351622 0.649626088923149 0.7853848798604652 0.86021566819007 0.46565428104489864 0.7322598625051708 0.6582671601803592 0.5921836145606107 0.8132336905598772 0.7285136728859658 1.0 10.07452693002253 -9.534957019484239 0.9173743792732788 0.9679148110179184 0.6819373152924567 0.16021226504292885 0.12427028565427645 0.25220903026482605 0.4482770381182551 0.03130527730153046 0.02140357402073086 2.9177157552309186e-10 9.534957019484239 -0.2859774957254617 DRT(ph)PPHLLYSDR ddPTM_A549_MK2206_60min_R1 4 DRTPPHLLYSDR 12 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 DRT(1)PPHLLYSDR;DRT(1)PPHLLYSDR;DRT(1)PPHLLYSDR;DRT(0.994)PPHLLY(0.002)S(0.003)DR 107.63 7.162e-05 41592700.0 3292.87 3605.75 2935.3199999999997 3582.8999999999996 4359.82 3837.56 3494.4 3952.75 5722.53 4243.16 5279.280000000001 True False 3848.625953057904 3789.2672735965252 3351.5925140760455 4460.710660842492 3718.4962534186325 4243.648052033837 4129.287247753757 4513.064417289186 4426.386092002614 3284.627208997394 3968.2890752842973 0.9698451599779635 0.9548869050889528 0.8445938414493984 1.124089141747547 0.9370527657822486 1.0693898482508644 1.04057118053022 1.1372821716537522 1.1154394269236791 0.8277187338631765 1.0 11.954301409249915 -6.265317490113792 24.99945283534767 1.056917160028815 0.926286462681049 0.1776739703750918 0.09261171178200003 232.59200586536764 1499362.2542907326 0.009323666576547394 0.022463635742794762 5.428533345519543e-07 6.265317490113792 -0.130630697347766 DRT(ph)PPHLLYSDR ddPTM_A549_PD325901_60min_R1 4 DRTPPHLLYSDR 12 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 DRT(1)PPHLLYSDR;DRT(0.986)PPHLLY(0.002)S(0.012)DR;DRT(1)PPHLLYSDR;DRT(0.997)PPHLLY(0.001)S(0.002)DR 116.0 1.4108e-05 57782000.0 5417.83 5833.16 5824.63 5523.459999999999 6753.43 6159.84 5757.799999999999 6159.37 6343.790000000001 6741.370000000001 7599.470000000001 True False 5967.844113204355 6324.740864676797 6219.9244181455415 5864.631579512183 6279.092374868695 6109.676305328439 5976.916229789053 6036.516533417711 6077.182567423976 6315.718747710601 6664.783367009454 0.8954295713113596 0.9489792115350875 0.9332523017828372 0.8799433164687682 0.9421300031971148 0.9167104118599287 0.896790773331759 0.9057333451074117 0.91183497388766 0.9476255115767579 1.0 12.702342267190073 -10.61130903636015 0.7956078049867997 1.002593781699982 0.9149895541007396 0.40736833738687606 0.02476736194713822 0.2871343851842102 0.3101442842437008 0.015419248730729727 0.003756250434143838 2.4473211511552304e-11 10.61130903636015 -0.08760422759924236 DRT(ph)PPHLLYSDRDR ddPTM_A549_MK2206_60min_R1 4 DRTPPHLLYSDRDR 14 2 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 DRT(1)PPHLLYSDRDR;DRT(1)PPHLLYSDRDR;DRT(1)PPHLLYSDRDR;DRT(1)PPHLLYSDRDR 100.77 1.0656e-05 208821000.0 1012.44 1441.9 1425.96 1412.12 2125.75 1501.01 1342.1599999999999 1402.45 2176.25 2294.48 2000.18 True False 1183.3151202185165 1515.286551147148 1628.1825699998233 1758.0894633924754 1813.0549909639972 1659.8458819102007 1586.0130987995597 1601.2515823229955 1683.332849757135 1776.1553744144314 1503.4801038403243 0.78705073462295 1.0078527459569744 1.0829425449934273 1.1693466770207368 1.2059055429685626 1.1040025589101397 1.0548946372808141 1.0650301112950777 1.1196242939679844 1.1813627396050106 1.0 10.554090060933948 -5.283205723594942 2.4957577168148064 1.0797851776213077 0.73083055617439 0.6724687725100116 0.06307094454472933 0.2538313201234303 2.0232736967865046 0.009640915237053453 0.1834405283507672 5.209478816776366e-06 5.283205723594942 -0.3489546214469177 DRT(ph)PPHLLYSDRDR ddPTM_A549_PD325901_60min_R1 3 DRTPPHLLYSDRDR 14 2 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 DRT(1)PPHLLYSDRDR;DRT(1)PPHLLYSDRDR;DRT(1)PPHLLYSDRDR 120.11 8.247399999999999e-07 146196000.0 2714.51 3210.42 2797.6499999999996 3233.25 3386.81 3407.41 3140.7400000000002 3667.12 3024.5099999999998 3134.2699999999995 3805.5699999999997 True False 2990.085056883358 3480.9733603699688 2987.5153526361123 3432.960509256475 3148.932149460208 3379.6611826831836 3260.262579378873 3593.9764148000127 2897.400362716842 2936.371657302135 3337.5090154958402 0.8959032149428167 1.0429854553824522 0.8951332681845263 1.0285996212496984 0.9434977208570579 1.0126298287110638 0.976855062935166 1.076843957009078 0.8681325950774659 0.8798093559204634 1.0 11.704556018568967 -8.780783860207343 24.999496516543278 0.9377293020057612 0.9839015485564133 0.16391715629396408 0.06348525499356183 445.38552909535355 575583.6162035981 0.011457554762321484 0.012206379491841564 1.65659421259227e-09 8.780783860207343 0.04617224655065211 DRT(ph)PPLLYR ddPTM_A549_MK2206_60min_R1 3 DRTPPLLYR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DRT(1)PPLLYR;DRT(1)PPLLYR;DRT(1)PPLLYR 149.49 9.6508e-06 689177000.0 6929.500000000001 7673.4 7285.1 6486.51 10352.6 8265.1 7140.099999999999 7202.099999999999 11620.0 10635.6 11802.4 True False 8099.030189990724 8063.943284258638 8318.236725227718 8075.705241190504 8829.746254006299 9139.707396070648 8437.363747048586 8223.019730506217 8988.088553327005 8233.010573255006 8871.538350330991 0.9129228629991273 0.9089678662052764 0.937631828522431 0.9102936742520202 0.995289193973542 1.0302280207952492 0.9510598290694188 0.9268989667614324 1.013137541471786 0.9280251347781004 1.0 13.11496857836091 -6.058124122235756 0.39029777961881207 1.0050962534052041 0.8633364622264131 0.15849831755867172 0.03950631817808818 1.9779897644574056 0.3045404984972722 0.00944320545649099 0.11787985104847805 8.747337388381212e-07 6.058124122235756 -0.141759791178791 DRT(ph)PPLLYR ddPTM_A549_PD325901_60min_R1 4 DRTPPLLYR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DRT(1)PPLLYR;DRT(1)PPLLYR;DRT(1)PPLLYR;DRT(1)PPLLYR 134.49 1.8275e-05 1236723000.0 21295.4 22726.980000000003 21583.239999999998 19738.54 23325.59 22797.32 20230.48 22441.02 25220.510000000002 25282.1 29597.7 True False 23457.293331155088 24642.262364943246 23048.008456965606 20957.74478632315 21687.281027317025 22611.66618434736 21000.36198694343 21993.416251460367 24160.579671386047 23685.783891329815 25957.370535278875 0.9036852673222077 0.9493358478452871 0.8879176889523871 0.8073909010868149 0.8354960683649241 0.8711077323342771 0.8090327160989463 0.8472898370645414 0.930779164960072 0.91248779837458 1.0 14.663856626220584 -9.242717282841031 1.30175798362095 0.9808750242567674 0.8637833122080792 0.35358701918473 0.04624867300675757 0.21022057635952046 0.7391514648610357 0.010687134235533718 0.009310710232580894 5.718507791307919e-10 9.242717282841031 -0.11709171204868818 DRT(ph)PPPR ddPTM_A549_MK2206_60min_R1 1 DRTPPPR 7 1 P62854;Q5JNZ5 P62854 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 1 DRT(1)PPPR 49.59 0.021481999999999998 4245300.0 583.82 354.21 366.93 325.34 421.69 291.97 339.11 305.14 363.08 888.93 862.94 True False 682.3545429714101 372.2377760467656 418.9661914850593 405.04831460506773 359.659959609365 322.86607160599954 400.7218974890614 348.394529452058 280.8429597196187 688.1200956113021 648.6481820675989 1.051964010438402 0.5738669841950976 0.6459066764815148 0.6244499341907592 0.5544761699060509 0.4977522184319512 0.6177800363391756 0.5371086192541739 0.4329665410059696 1.0608525771518922 1.0 9.341292382005413 -10.935048045817636 1.1944997818426042 0.9998868582348728 0.5923986714572699 0.5083018575665936 0.15454981346802707 0.32005383342544236 0.8118778016703379 0.10657196578068684 0.02505725248588951 1.1613201303711398e-11 10.935048045817636 -0.4074881867776029 DRT(ph)PPPR ddPTM_A549_PD325901_60min_R1 3 DRTPPPR 7 1 P62854;Q5JNZ5 P62854 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 1 DRT(1)PPPR;DRT(1)PPPR;DRT(1)PPPR 61.678999999999995 0.011029 14307400.0 1528.62 1449.85 1294.03 1199.02 1364.51 1324.3 1432.37 1246.2 1299.6399999999999 1743.29 1772.8400000000001 True False 1683.804377089433 1572.0339477490168 1381.8506574345288 1273.0807422280052 1268.6715249039498 1313.5153398702657 1486.879624172938 1221.3435633750123 1245.0206504198418 1633.218371888267 1554.791918958697 1.082977314557398 1.0110896053549516 0.8887688703450469 0.8188110104666839 0.815975121451382 0.8448174471796694 0.9563206536143806 0.7855350600181872 0.8007635203389013 1.0504417677846534 1.0 10.602505799054285 -5.636626419192029 3.033694429132726 0.8824520711546698 1.0731242268661647 0.3816419389419359 0.08185857607063933 0.20929508048096845 3.636140966978033 0.011992622602491542 0.06334800859472317 2.3087323100212132e-06 5.636626419192029 0.19067215571149487 DRVEEEHEDES(ph)R ddPTM_A549_PD325901_60min_R1 1 DRVEEEHEDESR 12 1 D4PHA4;Q86WP2-4;Q86WP2;Q86WP2-2;Q86WP2-3 D4PHA4 GPBP1 Vasculin 1 DRVEEEHEDES(1)R 46.746 0.010289 1887500.0 122.08 163.45 256.3 237.96 217.14 182.7 170.84 256.62 162.73 150.37 293.69 True False 134.47347172945393 177.22450512782484 273.6940592571034 252.65824875362907 201.8888354923334 181.2121517739919 177.34140968723509 251.50151278550445 155.89102400881862 140.8756125376953 257.56799185430134 0.5220892190886888 0.6880688235053506 1.0626089728258008 0.9809380697293724 0.7838273460878478 0.7035507419590331 0.6885227019495184 0.9764470770412012 0.6052422231757804 0.5469453386792894 1.0 8.008809509693739 -11.122173429623725 1.4841178658045713 0.9997116564745183 0.7662838544974422 0.0 0.20786570159939577 0.5361441559327792 2.1177567797959838 0.12215981542892287 0.026517514511272877 7.54790752002647e-12 11.122173429623725 -0.23342780197707613 DRVLDDVSIRS(ph)PETK ddPTM_A549_MK2206_60min_R1 2 DRVLDDVSIRSPETK 15 2 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 DRVLDDVS(0.288)IRS(0.709)PET(0.004)K;DRVLDDVS(0.383)IRS(0.611)PET(0.006)K 60.333999999999996 0.00185 8337100.0 5405.5 5297.8 4735.5 4589.200000000001 6572.299999999999 5261.1 4175.3 4470.2 7709.2 7669.8 7264.299999999999 True False 6317.816248213413 5567.435391266634 5407.06510717984 5713.554206017016 5605.523376273164 5817.826109964462 4933.897964041395 5103.864539413349 5963.0785090627 5937.186853092556 5460.373825519337 1.1570299855088264 1.019607002957735 0.990237166896824 1.046366858495004 1.0265823468121291 1.065462969362016 0.9035824508905546 0.9347097291324958 1.0920641515776717 1.0873224146934426 1.0 12.414784008290965 -5.260033474774057 23.99433425354187 1.0247459645460129 1.1570300570752234 0.3291182260894262 0.05656292590539803 68.40107580811365 1167160.9452071385 0.008157027058125602 0.06995024862255715 5.494985176951275e-06 5.260033474774057 0.13228409252921058 DRVLDDVSIRS(ph)PETK ddPTM_A549_PD325901_60min_R1 4 DRVLDDVSIRSPETK 15 2 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 DRVLDDVS(0.035)IRS(0.953)PET(0.012)K;DRVLDDVS(0.003)IRS(0.995)PET(0.001)K;DRVLDDVS(0.002)IRS(0.993)PET(0.005)K;DRVLDDVSIRS(0.999)PETK 102.98 1.3019e-06 37098000.0 7606.7 7949.299999999999 7517.1 7599.3 8658.099999999999 8093.5 7806.1 8000.9 8299.8 8443.2 9818.3 True False 8378.926584243425 8619.21540907078 8027.255609994438 8068.691501737493 8049.984924823489 8027.589219391375 8103.16540716182 7841.315772915373 7950.98826933198 7910.094911074475 8610.711343331699 0.9730818105675122 1.0009876147742043 0.9322407046208673 0.9370528380313252 0.9348803605009419 0.9322794481559407 0.94105644517245 0.9106466887881265 0.9233834409615157 0.9186343143647714 1.0 13.071916710333658 -10.858524561664902 1.1322805415981947 0.9996636625566936 0.941289230068082 0.0 0.03331125211946322 0.38443169797150095 0.8830465389811956 0.017338462615473796 0.004319881098810886 1.3850818499572776e-11 10.858524561664902 -0.05837443248861163 DRYDS(ph)DRYR ddPTM_A549_MK2206_60min_R1 4 DRYDSDRYR 9 2 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 DRYDS(1)DRYR;DRYDS(1)DRYR;DRYDS(1)DRYR;DRYDS(1)DRYR 134.38 1.5181e-05 131502000.0 5621.02 5708.33 5000.27 4094.54 5835.79 4967.9400000000005 4402.1900000000005 4895.88 6593.59 8055.990000000001 7555.67 True False 6569.710755255309 5998.859614751233 5709.38347449649 5097.702483810884 4977.353021624264 5493.644113348322 5202.010940129666 5589.885983003671 5100.152392799604 6236.136263871959 5679.38861311643 1.1567637298287174 1.0562509494238501 1.0052813539314402 0.8975794457941909 0.8763888792764015 0.9672949832418344 0.9159455875436538 0.9842407984010718 0.8980108142311143 1.0980295043501218 1.0 12.471519916452008 -5.589086813516429 1.747096585420765 0.9438489043207882 1.1646996607190534 0.49749657904904476 0.06046838182515982 0.2276156303954388 1.0592335963538342 0.006637390552253299 0.06731990417517489 2.57580621344323e-06 5.589086813516429 0.22085075639826524 DRYDS(ph)DRYR ddPTM_A549_PD325901_60min_R1 4 DRYDSDRYR 9 2 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 DRYDS(0.999)DRY(0.001)R;DRYDS(1)DRYR;DRYDS(1)DRYR;DRY(0.005)DS(0.995)DRYR 93.959 0.00019755 138943000.0 5183.04 5460.71 6254.96 5945.19 6373.83 5799.85 5580.26 6189.1900000000005 7078.69 7950.9800000000005 7971.7 True False 5709.218405247619 5920.903196063411 6679.459199730054 6312.410883793866 5926.154169319792 5752.617944534138 5792.619847935442 6065.74175012437 6781.197276107561 7448.953765877268 6991.231436769833 0.8166255768934257 0.8469041898574385 0.9554052472930539 0.9029040078110183 0.8476552697356935 0.8228332871772339 0.8285550121355749 0.8676213632725813 0.969957487094818 1.0654709164254068 1.0 12.77133087921095 -8.795507305328815 3.7845383159634194 0.987166356901322 0.8616804807723876 0.6873108697343493 0.04458170167424551 0.0988465233247234 2.9164343819216647 0.007345703292485714 0.00791161701977 1.6013737111844405e-09 8.795507305328815 -0.12548587612893447 DRYDSDRYR ddPTM_A549_MK2206_60min_R1 2 DRYDSDRYR 9 2 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 77.66199999999999 0.0006313 26312000.0 818.34 1137.76 991.03 815.5699999999999 1056.75 964.09 776.02 620.0899999999999 1364.4 1186.23 1034.22 False True 956.4557855079026 1195.667124234122 1131.5729560064265 1015.3846866123288 901.3034748682597 1066.109363888852 917.0127890344173 707.9896564459807 1055.3655784990844 918.2598191274851 777.394630980082 1.2303349513773636 1.5380439696717647 1.455596566932579 1.3061380232742366 1.1593898889319092 1.3713876085621786 1.179597533209504 0.9107210523867388 1.3575673621112576 1.181201647829508 1.0 9.602503333617054 -14.999999999999998 0.08739514024499936 0.14022918385335176 1.5454654055607357 0.2781509130504979 0.1516092540667787 121.94247073609284 0.7804415737272966 20.626153991086028 1.7440225260122737 1.000000000000004e-15 14.999999999999998 1.405236221707384 DRYDSDRYR ddPTM_A549_PD325901_60min_R1 2 DRYDSDRYR 9 2 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 77.37899999999999 0.00063885 21011900.0 2755.8 2166.71 2813.1000000000004 2773.6000000000004 3295.5 3805.1 3025.1000000000004 3799.4 3057.1 3278.0 3343.5 False True 3035.5667872872664 2349.3062557694057 3004.0138825445097 2944.918972697368 3064.035448857808 3774.112527176884 3140.221835898237 3723.61798642836 2928.6207183516212 3071.0265205730193 2932.2706961927765 1.0352273380587298 0.801190101179852 1.0244667678345263 1.0043134750557015 1.0449360807090946 1.2870955372834931 1.0709181249792052 1.2698752510343123 0.9987552384416983 1.0473202643127053 1.0 11.517802578457184 -5.971105118271687 23.675779933313716 1.0467347499302317 0.9168633235173254 0.1891471103719441 0.11354993864935754 160.56982243926385 131563.76781429665 0.016396564188925728 0.05097719807955703 1.0687961524671464e-06 5.971105118271687 -0.1298714264129064 DRYNS(ph)DNDR ddPTM_A549_MK2206_60min_R1 3 DRYNSDNDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DRYNS(1)DNDR;DRYNS(1)DNDR;DRYNS(1)DNDR 113.99 6.2407e-05 64004500.0 2073.01 1893.8000000000002 1447.84 1691.4499999999998 2616.75 1344.8700000000001 1912.54 1502.85 2376.29 2737.59 2661.31 True False 2422.8834077715087 1990.1863309261878 1653.1654830069167 2105.8553259320765 2231.8295413877636 1487.183250747544 2260.023761681252 1715.8835897850993 1838.0641091553732 2119.166517661172 2000.4332785805736 1.2111793148585732 0.994877635878135 0.8264037099902357 1.0526996068703207 1.1156730720713561 0.7434305691029041 1.1297671288916336 0.8577559712476992 0.9188329992488372 1.0593537611836004 1.0 10.966096795242033 -5.28152933580252 4.3739094926832465 0.9589905138069383 1.225196399299712 0.2597414516903672 0.1169358380769745 0.16271596851785688 7.249587973856454 0.013829743032831453 0.12825982062544264 5.229626398137029e-06 5.28152933580252 0.2662058854927736 DRYNS(ph)DNDR ddPTM_A549_PD325901_60min_R1 5 DRYNSDNDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DRY(0.002)NS(0.998)DNDR;DRY(0.001)NS(0.999)DNDR;DRYNS(1)DNDR;DRYNS(1)DNDR;DRYNS(1)DNDR 96.604 0.00031458 89536800.0 2556.1400000000003 3048.92 2696.42 2513.97 2825.4 3232.25 2643.38 2790.8 2655.38 3450.2200000000003 3577.62 True False 2815.637451069188 3305.8631885856703 2879.415276090671 2669.252217259878 2626.9536511008523 3205.9276276490727 2743.9752724130376 2735.1353046597537 2543.78361293269 3232.37252038177 3137.5954204017316 0.8973870349124488 1.0536295301458574 0.9177140103429894 0.8507318056061263 0.8372506008963074 1.0217785272132351 0.874547194507858 0.871729760591489 0.8107430283688357 1.0302069219516847 1.0 11.615443619565198 -5.976042467637261 24.774001351732956 0.9023317202190324 0.9780492232872867 0.07585178727857933 0.07941406033667965 341.709175576478 353349.8453304683 0.011401584564390957 0.03544655816834018 1.056714172997694e-06 5.976042467637261 0.07571750306825431 DRYS(ph)AGK ddPTM_A549_MK2206_60min_R1 4 DRYSAGK 7 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 DRYS(1)AGK;DRYS(1)AGK;DRYS(1)AGK;DRY(0.001)S(0.999)AGK 86.898 0.003619 281188000.0 15390.800000000001 15544.0 14460.800000000001 12830.099999999999 14485.9 12804.5 12464.3 14042.4 15374.600000000002 20916.299999999996 22210.5 True False 17988.390771067065 16335.123206207976 16511.55888541995 15973.475075965072 12355.04329935569 14159.463691060804 14728.9019694875 16032.953203046392 11892.277648191177 16191.293302998762 16695.01987138433 1.0774704618291353 0.9784428729076731 0.9890110351842804 0.9567808363824709 0.7400436414294141 0.8481249977623847 0.8822332697389115 0.9603434632939409 0.7123248573411302 0.9698277347217197 1.0 14.027130190131105 -6.535272875240681 24.054394580695266 0.8611409073390422 1.0049173510382856 0.3337171934124352 0.08768681363389985 146.91514930798505 285130.7695813053 0.015763077591699426 0.03283407151730398 2.9155945165046605e-07 6.535272875240681 0.14377644369924336 DRYS(ph)AGK ddPTM_A549_PD325901_60min_R1 4 DRYSAGK 7 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 DRY(0.002)S(0.998)AGK;DRY(0.004)S(0.996)AGK;DRYS(1)AGK;DRY(0.008)S(0.992)AGK 86.898 0.003619 572073000.0 28407.0 24627.600000000002 26124.8 26225.8 28106.699999999997 24484.1 24162.3 24810.699999999997 24718.9 26967.9 27996.800000000003 True False 31290.857727871866 26703.054282569727 27897.78602918447 27845.708102886732 26132.5823548511 24284.70960727747 25081.809548617905 24315.83112488237 23680.050595290275 25265.14219162938 24553.371086337647 1.274401694897333 1.0875514481768347 1.1362100108814701 1.134089001667924 1.0643174928184171 0.9890580613914286 1.0215220329795895 0.9903255662686802 0.9644317479674586 1.0289887324550635 1.0 14.583633494340322 -5.687258911007312 0.45442267277042586 0.9799398174496404 1.3311307707630355 0.7824845006781099 0.04051702307874543 1.0066047499141695 0.17555938118457678 0.008416829021289898 0.17586553857459314 2.054665312007972e-06 5.687258911007312 0.3511909533133951 DRYS(ph)AGKR ddPTM_A549_PD325901_60min_R1 1 DRYSAGKR 8 2 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 DRYS(1)AGKR 50.452 0.010265999999999999 44185000.0 2880.0 2704.8 2377.8 2373.8 2942.3 2554.3 2638.0 2633.9 2769.5 2712.2 2934.0 True False 3172.3754798560553 2932.742988496427 2539.1718068729633 2520.4242347090476 2735.642998383957 2533.498627675465 2738.390533568988 2581.3647982454218 2653.1075461956802 2540.951229133054 2573.1366001583965 1.2328826536689779 1.1397540994581843 0.9868002370012761 0.9795143540198744 1.0631549829945122 0.9845954651297986 1.0642227596468912 1.003197730772054 1.0310791685262108 0.9874917752040986 1.0 11.329312332149664 -5.567456390818076 3.387076960101854 1.0150614743737405 1.2215826849038909 0.8465494483413446 0.0297698529603347 0.05658814383106822 1.2704359582560332 0.003752818071548653 0.020596086134418573 2.7073450452180827e-06 5.567456390818076 0.20652121053015038 DS(ph)DGVDGFEAEGK ddPTM_A549_MK2206_60min_R1 2 DSDGVDGFEAEGK 13 0 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 DS(1)DGVDGFEAEGK;DS(1)DGVDGFEAEGK 126.95 3.19e-07 5845000.0 1407.75 1407.0 1164.55 1131.41 1775.83 1796.54 1725.96 2169.6000000000004 2191.29 1930.8000000000002 1876.04 True False 1645.3437838169334 1478.610290217102 1329.7007012071115 1408.6055007909258 1514.607759427776 1986.6486703532648 2039.5445908118904 2477.147444121338 1694.966313771079 1494.6309390011622 1410.1674919300265 1.166771885774386 1.0485352262612444 0.9429381323967523 0.9988923364436924 1.0740623139417342 1.4088033384135363 1.4463137198124363 1.7566334909131887 1.2019609893653573 1.0598960389843726 1.0 10.461650812836474 -7.021984624994497 22.85713611872701 1.2031272550282828 1.0334899617536208 0.19758548144434274 0.21255496508675492 505.27824052785553 525332.8403052895 0.03751646415143385 0.06543181665861646 9.506384478086083e-08 7.021984624994497 -0.16963729327466193 DS(ph)DGVDGFEAEGK ddPTM_A549_PD325901_60min_R1 2 DSDGVDGFEAEGK 13 0 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 DS(1)DGVDGFEAEGK;DS(1)DGVDGFEAEGK 170.79 1.1195e-21 5675800.0 2228.3 2789.1 2595.6000000000004 2189.7 2712.2 2211.04 2786.0 2649.8 2318.4 3382.2 3129.3 True False 2454.5153756122395 3024.1472453473025 2771.753024610761 2324.952795830483 2521.7044285820525 2193.0340233079764 2892.0227545576977 2596.947660272113 2220.965710453173 3168.647314790136 2744.4159382671014 0.8943671188420831 1.1019274459019617 1.0099609851271016 0.8471575913155938 0.9188492142974235 0.7990895231036726 1.053784418838421 0.9462660612268182 0.8092671666436797 1.1545798399607408 1.0 11.422283434758853 -6.229254971498407 20.54998080928992 0.9103614284035366 1.0120698137796869 0.0017219408181413653 0.11206249322400078 100.98395804048805 64476.68593813843 0.012987882693106178 0.03435152623487633 5.898546786068752e-07 6.229254971498407 0.10170838537615023 DS(ph)DGVDGFEAEGKK ddPTM_A549_PD325901_60min_R1 2 DSDGVDGFEAEGKK 14 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 DS(1)DGVDGFEAEGKK;DS(1)DGVDGFEAEGKK 101.92 1.1922e-05 19271000.0 6326.799999999999 6699.799999999999 6212.700000000001 6675.8 7473.5 6787.1 7539.4 7721.1 7806.3 7945.3 8780.3 True False 6969.092078456007 7264.415658950142 6634.331182000028 7088.14900415816 6948.587142175343 6731.82810785583 7826.31599271798 7567.09660341423 7478.228358139494 7443.632402046624 7700.378762907557 0.9050323747743252 0.9433842000009878 0.8615590721273815 0.9204935526420486 0.9023695270220256 0.8742203877402499 1.016354679904456 0.9826914800431192 0.9711507171779454 0.9666579568660089 1.0 12.910713694876012 -7.761191964989151 24.999996880309006 0.9877396120543794 0.9022265286486895 0.765987143754404 0.023717998999810044 2.3262015954921873 235036.0368689209 0.0035266383996832946 0.005051002475445534 1.7330377984761164e-08 7.761191964989151 -0.08551308340568997 DS(ph)DKRPSLGLAPGGLAVVGR ddPTM_A549_PD325901_60min_R1 1 DSDKRPSLGLAPGGLAVVGR 20 2 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 DS(0.526)DKRPS(0.474)LGLAPGGLAVVGR 64.488 0.00037363 4273000.0 699.22 676.13 771.32 692.55 866.49 700.73 698.5 588.99 941.71 782.98 891.69 True False 770.2042996614421 733.1098479784416 823.6664135239533 735.3272406048318 805.6307316282214 695.0234872062912 725.0817997338665 577.2421323962835 902.1332035847391 733.5425091757974 782.0177828886308 0.9848935874788526 0.9374593059386295 1.0532579073604695 0.9402947819021037 1.030194899983436 0.8887566272968901 0.9271934930373922 0.7381445090213378 1.1535967893881185 0.9380125685457246 1.0 9.611057604204463 DS(ph)FQENEDGYR ddPTM_A549_MK2206_60min_R1 1 DSFQENEDGYR 11 0 Q5VYS8-4;Q5VYS8-6;Q5VYS8;Q5VYS8-5;Q5VYS8-3;Q5VYS8-2 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 DS(1)FQENEDGYR 51.286 0.024891 838030.0 162.39 163.64 182.54 219.86 174.47 0.0 273.8 270.69 486.71 254.27 260.58 True False 189.7974619456806 171.96857703704794 208.42691683340888 273.72570986989064 148.80569411901146 0.0 323.54591587539426 309.06113645335756 376.4709621161605 196.83023040181556 195.87079435786364 0.968993170053281 0.877969467581035 1.0641041075914806 1.3974809811093276 0.7597135377270059 0.0 1.6518333778963654 1.5778826928566527 1.9220372457791397 1.004898310884465 1.0 7.61375848796107 DS(ph)GDENEPIQER ddPTM_A549_PD325901_60min_R1 1 DSGDENEPIQER 12 0 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 1 DS(1)GDENEPIQER 53.251999999999995 0.02311 1655600.0 429.98 290.01 299.77 502.4 333.33 370.99 236.95 491.98 348.14 396.05 290.64 True False 473.63125306545373 314.4501604901835 320.1141948634487 533.4321069668147 309.9180507260731 367.96878044134263 245.96726191401518 482.16707294915614 333.5088864894619 371.04333540968423 254.89312251875822 1.8581562671648704 1.2336549428360601 1.2558761558577975 2.092767751815501 1.2158745111032387 1.4436198858769242 0.9649819480551651 1.8916441063005625 1.3084263835518675 1.4556820197546845 1.0 7.993748637117035 -10.979256473716413 0.23270775658271603 0.6561872387685089 1.568224804807354 0.001105734673851444 0.3523507758548361 7.23364497841212 0.4754533132018531 1.900996306434602 0.27383515586521684 1.0489228016674437e-11 10.979256473716413 0.912037566038845 DS(ph)GREDEPGSPR ddPTM_A549_PD325901_60min_R1 1 DSGREDEPGSPR 12 1 Q2TAM9 Q2TAM9 TUSC1 Tumor suppressor candidate gene 1 protein 1 DS(0.721)GREDEPGS(0.279)PR 77.593 0.00087979 10805000.0 274.41 151.51 174.55 189.03 214.39 184.74 137.64 240.05 146.79 277.1 242.48 True False 302.26790119003505 164.27827942439126 186.39601265441837 200.7059537817217 199.33198600534837 183.23553869035183 142.87796551949802 235.26201443441798 140.62092677597545 259.60385870981816 212.6564972073647 1.4213903885348438 0.7725053388056181 0.8765121926778502 0.9438035348904019 0.9373425624093517 0.8616503191608388 0.67187209135762 1.1063006187156852 0.6612585489868845 1.220766175117962 1.0 7.732381123485879 -5.256183873151972 24.726304802877696 0.8564077349906898 1.421390666641777 0.41364452162063214 0.1677711253776273 271.6828122652068 1278175.7100182364 0.019555603369500782 0.2288061252037142 5.5439094324102976e-06 5.256183873151972 0.5649829316510873 DS(ph)GSDQDLDGAGVR ddPTM_A549_MK2206_60min_R1 1 DSGSDQDLDGAGVR 14 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DS(0.5)GS(0.5)DQDLDGAGVR 60.448 0.0070057 3415500.0 370.15 350.76 341.66 241.65 553.11 270.41 359.04 454.92 397.33 538.87 494.95 True False 432.62227070135873 368.6121857829071 390.1125255029172 300.8542608480808 471.7482517003863 299.0246067163694 424.2729205109627 519.4063031340704 307.33538940563005 417.1388927385314 372.0402550749274 1.1628372596783387 0.9907857570645684 1.0485761155720907 0.8086605058033034 1.2680032476737715 0.8037426128958735 1.140395198432266 1.396102427221119 0.8260810092814659 1.1212197794416663 1.0 8.539314920395476 DS(ph)GSDQDLDGAGVR ddPTM_A549_PD325901_60min_R1 1 DSGSDQDLDGAGVR 14 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DS(0.5)GS(0.5)DQDLDGAGVR 52.265 0.022201 3720100.0 414.56 661.68 454.08 423.43 507.97 555.54 566.13 568.28 457.24 557.55 473.45 True False 456.6458260170582 717.4420957661619 484.8965994048599 449.58430942069737 472.29193960136604 551.0158664287002 587.6743869482226 556.9452095929645 438.0237928949314 522.3461978479215 415.21865144682806 1.09977195009395 1.727865772084749 1.16781025542865 1.0827652078106855 1.1374535752564734 1.3270498916864335 1.4153371600733087 1.3413299418325517 1.0549232106232196 1.25800273188068 1.0 8.697727440179284 -8.816891381708949 5.957453894099714 1.0245739889762469 1.291807891636284 0.12365627680581459 0.18697592334352361 0.16767916064886865 12.391793416443221 0.029997585263510623 0.03197438949998876 1.5244339714162759e-09 8.816891381708949 0.2672339026600372 DS(ph)GSISLQETRR ddPTM_A549_MK2206_60min_R1 1 DSGSISLQETRR 12 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DS(0.533)GS(0.459)IS(0.008)LQET(0.001)RR 40.278 0.045098 1745500.0 323.2 420.01 415.21 395.72 604.15 506.32 330.75 359.97 680.69 669.61 697.14 True False 377.74825851865234 441.3867149922421 474.09302146597827 492.6714177645459 515.2803353126653 559.8984463319848 390.84299370265427 410.9968498618904 526.5148018385682 518.344635935658 524.0208979148092 0.7208648739426101 0.8423074666461087 0.9047215928839774 0.9401751337112516 0.9833202022344444 1.0684658733266936 0.7458538299863646 0.7843138536980766 1.0047591688302562 0.9891678709728213 1.0 9.033480537256679 -4.147341604722322 0.5636238941208157 0.9746565373571112 3.239573818556445e-56 0.28251568960076956 0.09480783496196214 9.295659973927531 0.7850291651956459 0.01797851272876924 7.927324512407669 7.122925389718009e-05 4.147341604722322 -0.9746565373571112 DS(ph)GSISLQETRR ddPTM_A549_PD325901_60min_R1 1 DSGSISLQETRR 12 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DS(0.55)GS(0.45)ISLQETRR 86.291 0.00013554 3402800.0 444.85 451.38 456.39 481.3 476.68 573.2 442.72 512.28 684.35 517.48 598.28 True False 490.01084451873857 489.4193767182479 487.3633698960185 511.0288078883914 443.1996412567258 568.5320492438541 459.5679518656796 502.06217352411414 655.5891493912309 484.8062244863105 524.6953528093953 0.9338959110178044 0.9327686515570074 0.9288501742706718 0.9739533715177223 0.8446799440545564 1.0835469500534785 0.8758757808793203 0.95686415142788 1.2494662776809173 0.9239765930658523 1.0 9.035336201961412 -8.63530289096651 9.00418162789471 1.1176854596775179 0.9399654331455728 0.1553028031514444 0.09720397250684795 0.19776196012334776 14.985751108291048 0.016847269826780004 0.01910028256954213 2.3157789877361356e-09 8.63530289096651 -0.17772002653194507 DS(ph)GSPNPAR ddPTM_A549_MK2206_60min_R1 1 DSGSPNPAR 9 0 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 DS(0.602)GS(0.398)PNPAR 49.35 0.030413 6746400.0 653.94 790.21 592.87 416.64 863.1 790.85 552.71 573.16 917.45 1162.5 873.55 True False 764.3090847020035 830.4283137401959 676.9478809193772 518.7168187036805 736.1391333416567 874.5372220762569 653.1302526058773 654.407185228883 709.6490398665978 899.890442608686 656.6234262464952 1.163999111440601 1.2646949233706668 1.030952984405482 0.7899761080241373 1.1210978833784577 1.3318702731570793 0.9946800959256263 0.9966247914268288 1.0807549829941596 1.3704817809391845 1.0 9.358922411398616 DS(ph)GSPNPAR ddPTM_A549_PD325901_60min_R1 1 DSGSPNPAR 9 0 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 DS(0.597)GS(0.403)PNPAR 52.79 0.023214 7433600.0 786.05 836.16 804.78 462.79 1069.7 929.91 968.48 1034.7 793.54 1093.3 945.09 True False 865.8492173405747 906.6261377037748 859.3972103352784 491.37548722765183 994.5679622646637 922.3371212706782 1005.3360363725908 1014.0620967935532 760.1902734096844 1024.268851416255 828.8499214191206 1.044639318850517 1.0938363077256366 1.0368550302373873 0.5928401204241417 1.1999373307073589 1.1127914685586178 1.2129289155886005 1.22345682926207 0.9171627501733002 1.2357711872163137 1.0 9.694967088569994 DS(ph)LEEGELR ddPTM_A549_MK2206_60min_R1 1 DSLEEGELR 9 0 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DS(1)LEEGELR 102.52 0.00068876 1150300.0 0.0 0.0 0.0 0.0 204.46 130.37 195.94 194.95 227.94 253.57 227.86 True False 0.0 0.0 0.0 0.0 174.3842048465242 144.16566686739787 231.53976171155878 222.58475950933567 176.31195394538364 196.28836088798664 171.27607338392363 0.0 0.0 0.0 0.0 1.0181469098467335 0.841715156233431 1.3518511788424246 1.2995671555968074 1.0294021252470673 1.1460349190046923 1.0 7.420179816261904 -6.765526629571976 7.30997349553516 1.0499715076155713 9.26061684891863e-12 0.9358310217667023 0.13796956359529428 0.02446824980737603 7.660860560308605 0.020783560177203814 0.04115202362829715 1.715826497810014e-07 6.765526629571976 -1.0499715076063107 DS(ph)LEEGELR ddPTM_A549_PD325901_60min_R1 2 DSLEEGELR 9 0 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DS(1)LEEGELR;DS(1)LEEGELR 74.16199999999999 0.0021746 2646900.0 220.51 243.15 323.52 308.3 316.67 289.1 124.76 255.558 349.9 173.7 163.96 True False 242.89601286911775 263.64110383499917 345.47601268380066 327.3429907998984 294.4281916521933 286.7456654507994 129.50781007129154 250.46069520862738 335.1949198100264 162.7325523561725 143.79395942807457 1.6891948301250708 1.8334643880981099 2.4025766733032135 2.276472475630207 2.0475699592893233 1.9941426370850366 0.9006484735964939 1.7418026195593237 2.331077891889403 1.131706456957053 1.0 7.167859261336329 -7.552736524194246 24.99897112799205 1.5983336400388806 2.0651035763625716 0.3110173582277578 0.4236038651779185 307.3204734720331 257308.5319657411 0.08342076545360956 0.12373371084554197 2.8006799081154034e-08 7.552736524194246 0.466769936323691 DS(ph)LEEGELRDHR ddPTM_A549_MK2206_60min_R1 1 DSLEEGELRDHR 12 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9 P21127 CDK11B Cyclin-dependent kinase 11B 1 DS(1)LEEGELRDHR 41.644 0.025731999999999998 1094200.0 0.0 170.4 0.0 0.0 115.17 0.0 126.91 0.0 0.0 108.6 156.22 True False 0.0 179.07263216275337 0.0 0.0 98.22864556477647 0.0 149.96790425035167 0.0 0.0 84.06718457402432 117.42626254733848 0.0 1.5249794064642324 0.0 0.0 0.8365134292269346 0.0 1.2771240521250053 0.0 0.0 0.7159146748806214 1.0 6.875611295067185 -11.07028422733075 1.4134738078606863 0.9970685063251655 0.37512109330660937 0.08537918908854247 0.544249519161301 0.6227936279717561 2.237993442728242 0.3605191775062046 0.08130310084685931 8.505811866697608e-12 11.07028422733075 -0.6219474130185562 DS(ph)LGAYASQDANEQGQDLGKR ddPTM_A549_MK2206_60min_R1 2 DSLGAYASQDANEQGQDLGKR 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(1)LGAYASQDANEQGQDLGKR;DS(1)LGAYASQDANEQGQDLGKR 256.57 1.0135999999999997e-98 68510000.0 8015.200000000001 8589.0 7806.7 7169.6 10827.0 8572.0 7662.8 8757.2 11629.7 11620.5 10703.4 True False 9367.969807174206 9026.14341341484 8913.807448468131 8926.152321855572 9234.36264244018 9479.083350366918 9055.031571110201 9998.559917800229 8995.591518814726 8995.420979212244 8045.450381187956 1.1643810306851923 1.1218941122948147 1.1079314427580818 1.1094658345947783 1.1477744818403408 1.178191760716232 1.1254847326239026 1.2427595030825216 1.1180966997010398 1.1180755026773306 1.0 12.973957469379522 -10.122154052992252 0.8599739538267326 1.0085535824517025 1.1455749002715043 0.21477169521725337 0.049778668709292394 0.24968198666418093 0.3669118062041552 0.018064281938066223 0.0078384869677513 7.548244287568278e-11 10.122154052992252 0.13702131781980187 DS(ph)LGAYASQDANEQGQDLGKR ddPTM_A549_PD325901_60min_R1 2 DSLGAYASQDANEQGQDLGKR 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(1)LGAYASQDANEQGQDLGKR;DS(1)LGAYASQDANEQGQDLGKR 322.34 9.725499999999997e-185 131827000.0 19139.9 17703.5 18118.2 17367.5 21958.1 18249.4 18356.9 18088.1 19306.7 19012.4 21587.1 True False 21082.968557950328 19195.436075438643 19347.81000558742 18440.251030545685 20415.838807332624 18100.78293696929 19055.481874781126 17727.31865566006 18495.306539857786 17811.953819323528 18932.02355190161 1.1136141099841739 1.0139135958084404 1.0219620714365765 0.9740243022618399 1.0783759459924174 0.9560934089980664 1.0065211371907001 0.9363668182147098 0.9769323648448579 0.9408372945708924 1.0 14.208541001487493 -7.273238731595214 24.923056547310615 0.9838461381957481 1.0341983373655246 0.4037904495141301 0.04060654154838401 682.538530977571 1441683.1718768359 0.005492566433599437 0.008821099614738164 5.330418019597521e-08 7.273238731595214 0.05035219916977651 DS(ph)LGTYSSR ddPTM_A549_PD325901_60min_R1 2 DSLGTYSSR 9 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(0.774)LGT(0.225)YS(0.001)SR;DS(0.979)LGT(0.021)YSSR 196.88 3.0663e-16 230160000.0 13441.6 14190.7 13786.8 12284.0 15579.4 13680.5 12666.0 13477.0 14117.5 13698.7 14608.2 True False 14806.181336817071 15386.600091265986 14722.455154763295 13042.754781011849 14485.15669001225 13569.09054375531 13148.011561101148 13208.190662498031 13524.190569928696 12833.761744165231 12811.484009009508 1.1556960400844132 1.201000608551325 1.149160795455852 1.0180518331709039 1.130638470908269 1.0591349553426461 1.0262676479832455 1.0309649259375062 1.0556302892325344 1.001738887949285 1.0 13.645149978447968 -2.000000000006778 0.22134390240493845 1.00831060189358 2.0330365266296915 0.7026230572557084 0.03682391379300352 18.28611534020005 0.21283302808068685 0.022454067582309594 6.803173761907549 0.009999999999843927 2.000000000006778 1.0247259247361116 DS(ph)PRPGKPDER ddPTM_A549_MK2206_60min_R1 2 DSPRPGKPDER 11 2 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 DS(1)PRPGKPDER;DS(1)PRPGKPDER 59.607 0.0030057 9801500.0 1915.5500000000002 2535.3 1620.54 1632.98 2444.7 1909.3000000000002 1808.99 1881.74 2821.8 3146.1 2692.7 True False 2238.8480092989003 2664.3359408581496 1850.3569398773543 2033.0601733072574 2085.087868474507 2111.340858709235 2137.6600670541634 2148.4824075870592 2182.666805488654 2435.3938249386556 2024.028275260646 1.1061347495309028 1.3163531228411556 0.9141952029494612 1.0044623378818403 1.030167361770674 1.0431380255482572 1.0561414053264075 1.0614883368219679 1.078377625533704 1.2032410093801855 1.0 10.983013728989459 -5.75892230551574 24.999999941386267 1.032249546606197 1.2112439163773603 0.3883614652575271 0.08020397957297558 32.58572436054646 323625.8251952725 0.008089010566200816 0.0286672565456148 1.7421185073130794e-06 5.75892230551574 0.17899436977116334 DS(ph)PTLSNSGIR ddPTM_A549_MK2206_60min_R1 4 DSPTLSNSGIR 11 0 Q9HD20-3;Q9HD20-2;Q9HD20 Q9HD20-3 ATP13A1 Manganese-transporting ATPase 13A1 1 DS(0.998)PT(0.001)LSNSGIR;DS(0.968)PT(0.028)LS(0.002)NS(0.002)GIR;DS(0.726)PT(0.268)LS(0.005)NS(0.001)GIR;DS(1)PTLSNSGIR 164.9 8.397799999999999e-14 26232500.0 6475.280000000001 7439.64 7116.49 6798.93 8361.54 6511.62 6186.84 6876.92 9724.71 10667.369999999999 10419.63 True False 7568.148958603526 7818.2858987283225 8125.715291858149 8464.668155215564 7131.568542465062 7200.6753063364695 7310.908744245895 7851.744469684235 7522.078712170794 8257.603708189778 7832.148303841535 0.9662928566982673 0.9982300635055118 1.0374823071050154 1.0807594323850824 0.9105507538675115 0.919374228754665 0.9334487117231959 1.0025020166986736 0.9604106587820026 1.0543216736766288 1.0 12.935192367682225 -6.762142484677411 24.999984999593686 0.9700066175393607 1.0202861578034015 0.2231413851601628 0.04665762095792341 21.692883720014635 771375.6710762546 0.006170682549873122 0.012171756728303633 1.7292489287988488e-07 6.762142484677411 0.0502795402640408 DS(ph)PTLSNSGIR ddPTM_A549_PD325901_60min_R1 3 DSPTLSNSGIR 11 0 Q9HD20-3;Q9HD20-2;Q9HD20 Q9HD20-3 ATP13A1 Manganese-transporting ATPase 13A1 1 DS(0.997)PT(0.002)LSNSGIR;DS(0.994)PT(0.006)LSNSGIR;DS(0.949)PT(0.051)LSNSGIR 143.55 2.6329000000000002e-11 36825130.0 15644.4 15890.779999999999 13007.130000000001 14797.16 17512.12 13706.810000000001 12997.07 14215.579999999998 17298.81 16564.96 17699.15 True False 17232.607971201414 17229.951799297265 13889.872060026728 15711.146966411361 16282.129104734273 13595.186283838373 13491.680611119607 13932.039104993219 16571.801173932236 15519.045598606239 15522.266754155939 1.1101863048827936 1.110015184778609 0.894835289202065 1.0121683395374488 1.048953053224323 0.8758505764113603 0.8691823703846179 0.8975518412130785 1.0676147650597032 0.99979248162651 1.0 13.922051632705154 -5.708236344575273 22.134691075150997 0.9952732974545992 1.1101037466669783 0.30882568445978564 0.07276426269191631 36.99514064528357 15389.539611004437 0.011418332917691875 0.04422276571918272 1.9577789533974807e-06 5.708236344575273 0.11483044921237906 DS(ph)PVIVR ddPTM_A549_MK2206_60min_R1 1 DSPVIVR 7 0 I3L2J0 I3L2J0 CIC 1 DS(1)PVIVR 71.37899999999999 0.020558 1899100.0 220.13 314.64 277.57 215.68 503.57 336.67 142.68 334.68 375.63 320.79 444.09 True False 257.28256233821446 330.653832063901 316.93359978880943 268.5216096822431 429.4955200751453 372.296195936541 168.60310912016536 382.1219149145136 290.55040475785063 248.32331620166912 333.81019673951806 0.7707450666612788 0.9905444330147888 0.949442536161117 0.8044140421863099 1.2866458971901726 1.1152930604664981 0.5050867551890014 1.1447281079094613 0.8704060199352618 0.7439057243522226 1.0 8.382884214459814 -5.253008021726475 22.971956648829135 0.9509591116466947 0.7707448108164916 0.05330049303771378 0.20245078536851419 736.3253126887749 2006029.8416224495 0.024289417541717043 0.3617130000129887 5.58459879492313e-06 5.253008021726475 -0.18021430083020307 DS(ph)PVIVR ddPTM_A549_PD325901_60min_R1 2 DSPVIVR 7 0 I3L2J0 I3L2J0 CIC 1 DS(1)PVIVR;DS(1)PVIVR 91.318 0.012418 5112000.0 1422.49 1208.19 1299.39 890.85 1469.3 1226.3400000000001 984.6800000000001 921.8499999999999 1344.4099999999999 1013.76 1110.23 True False 1566.9001376182086 1310.008411443174 1387.574419266828 945.8757812328563 1366.1014368098256 1216.353093631731 1022.1525362375716 903.4629785726655 1287.9091230117117 949.7510205906361 973.6787483278321 1.6092578176417611 1.3454215917651946 1.4250844250732684 0.9714454411758254 1.4030309680230044 1.2492345095552932 1.049784169566181 0.9278861021915564 1.322724897943526 0.9754254390595577 1.0 9.927302043557365 -2.0000000000113687 0.41817736099866243 1.12968883712132 9.692531100811557 0.4956825969806654 0.15686617833724656 48.634438419542036 0.549757338766705 0.03537749514972911 351.8775909610557 0.009999999999738227 2.0000000000113687 8.562842263690237 DS(ph)PYQSR ddPTM_A549_PD325901_60min_R1 1 DSPYQSR 7 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 DS(0.996)PY(0.001)QS(0.003)R 92.73200000000001 0.012239 10953000.0 2228.7 2323.0 1955.4 2177.0 2148.8 2028.1 1839.4 1991.5 1862.5 2251.2 2190.4 True False 2454.9559833177746 2518.767362569209 2088.1052027754217 2311.4683456742755 1997.8757009575659 2011.5838260144117 1909.3993735583026 1951.7779701984723 1784.2256020182172 2109.0588478078043 1920.9946860896225 1.2779608403368798 1.3111787246514528 1.0869916600477274 1.2032663923602522 1.0400214614983878 1.047157413073949 0.9939639018185296 1.0160246586478134 0.9288029867746211 1.0978993659274536 1.0 10.907637812846811 -6.195816816462868 0.5657606637887591 0.9668611791061967 1.3651572584948988 0.7053291104085115 0.0634417812856252 0.4487153411433084 0.17298564451853635 0.009522800840961052 0.0961177849836419 6.370641751634964e-07 6.195816816462868 0.39829607938870204 DS(ph)QASPGRPSSVEEVR ddPTM_A549_MK2206_60min_R1 1 DSQASPGRPSSVEEVR 16 1 H0Y713;Q86YN6-6;Q86YN6-5;Q86YN6-4;Q86YN6-2;Q86YN6-3;Q86YN6 H0Y713 PPARGC1B Peroxisome proliferator-activated receptor gamma coactivator 1-beta 1 DS(0.503)QAS(0.489)PGRPS(0.004)S(0.004)VEEVR 49.089 0.006522399999999999 5740200.0 479.23 691.91 490.48 776.01 790.01 538.38 622.81 677.67 781.49 811.84 920.3 True False 560.1123079514042 727.1252636134426 560.037439292486 966.1324848364121 673.8005755199187 595.3510142522798 735.9665152167801 773.7317977773348 604.4837627830913 628.444780152633 691.764111012134 0.8096868557287434 1.0511173563912863 0.8095786271321361 1.3966212896226204 0.9740322818049457 0.8606272062614087 1.0638980882370042 1.1184908055511469 0.8738293200823312 0.908466874977285 1.0 9.434136357854031 -8.781632237595641 24.986779984700604 0.940419417875626 1.0136011202381807 0.049352376913375906 0.15920871285236798 651.6654829434455 806371.872062187 0.02686322462222029 0.028615044982820886 1.6533612789270802e-09 8.781632237595641 0.07318170236255472 DS(ph)QDGSSYR ddPTM_A549_MK2206_60min_R1 1 DSQDGSSYR 9 0 C9J9W2;Q14847;Q14847-2;Q14847-3;J3KSN1 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 DS(1)QDGSSYR 174.23 1.1554e-07 46601000.0 2081.4 2134.5 1650.3 1725.3 3761.2 2490.6 2237.4 2800.9 3438.6 2528.1 2957.0 True False 2432.689434655703 2243.1369328133633 1884.3373553751205 2147.998577451659 3207.932462431512 2754.153638873523 2643.9066186253003 3197.936152396505 2659.7625903158573 1957.000454158295 2222.6952909517345 1.0944772522616228 1.0091967810184526 0.8477713355699185 0.9663936330795522 1.4432623650621534 1.239105355594749 1.1895047555048393 1.4387649829532787 1.196638424143588 0.8804627706393027 1.0 11.11809446768107 DS(ph)QDGSSYR ddPTM_A549_PD325901_60min_R1 2 DSQDGSSYR 9 0 C9J9W2;Q14847;Q14847-2;Q14847-3;J3KSN1 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 DS(0.907)QDGS(0.046)S(0.046)Y(0.001)R;DS(1)QDGSSYR 112.94 0.00025829 89179000.0 2550.67 2678.42 2635.7799999999997 1942.08 2844.63 2077.58 1993.44 2183.12 1878.79 2484.35 2518.75 True False 2809.6121406959887 2904.139853315806 2814.6598810327273 2062.037870816305 2644.833002240749 2060.660877299453 2069.301450052225 2139.5759589754907 1799.83098996822 2327.4877170181758 2208.959717671768 1.2719164221144355 1.314709286042008 1.2742015431586793 0.9334882181507963 1.197320612540816 0.9328648507322619 0.9367764534127666 0.9685898488138085 0.8147866960042315 1.0536578364911677 1.0 11.109151394778968 -6.425073386443047 0.7558813942370811 0.9151256543198848 1.349387648644109 0.6310994495920814 0.09927399831037995 0.3837901353062845 0.3407019983375814 0.016721795209595484 0.10118706366847224 3.7577390120190867e-07 6.425073386443047 0.4342619943242242 DS(ph)QGTYSSR ddPTM_A549_MK2206_60min_R1 2 DSQGTYSSR 9 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(0.995)QGT(0.004)YS(0.001)SR;DS(0.936)QGT(0.042)YS(0.02)S(0.001)R 72.34 0.0026947 12997300.0 1948.51 1989.42 2086.58 1511.69 2357.5 1957.12 2080.3199999999997 1924.9 2629.2 2738.2 2319.0 True False 2277.370851504268 2090.6729805001455 2382.488419668315 1882.0541178623428 2010.7148729613666 2164.2211393688863 2458.287215901754 2197.7604697590177 2033.6903979696528 2119.6387182375097 1743.1282988559599 1.3064849288482892 1.199379863130146 1.3667889054592117 1.0796991357994485 1.153509397031204 1.2415730619423113 1.4102732527004254 1.2608139465129673 1.166690024655324 1.2159969634069157 1.0 10.76746304420675 -9.767103107043589 0.8151141660599945 1.0191894944265296 1.2476373766814588 0.11809477005846958 0.10711786751516075 0.3368232394177476 0.46816451998213215 0.03556406574622029 0.019639008659573274 1.7096093838547698e-10 9.767103107043589 0.22844788225492918 DS(ph)QGTYSSR ddPTM_A549_PD325901_60min_R1 1 DSQGTYSSR 9 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(0.995)QGT(0.004)YS(0.001)SR 69.578 0.0039459000000000004 7249000.0 1340.1 1246.7 1360.5 1119.6 1288.9 1293.7 1210.9 1253.1 1104.7 1233.9 1305.0 True False 1476.1459654705207 1351.76378429403 1452.8317113511096 1188.7551492039122 1198.372110463611 1283.1645361248684 1256.9814621299047 1228.1059374620665 1058.2733006977326 1155.9913434213092 1144.4932730765877 1.2897812509656745 1.181102428553612 1.2694104417456793 1.0386737756949338 1.047076587215046 1.1211638952455434 1.098286457159272 1.0730564926438704 0.9246653742690146 1.0100464289438877 1.0 10.160493267933521 -5.764231647407927 0.34527563909128206 0.962525991125452 1.439844843964069 0.6728811009711207 0.0616166443255217 1.9155542797927319 0.19920538780660574 0.02196889267349964 0.35954870965069924 1.720950396071778e-06 5.764231647407927 0.47731885283861697 DS(ph)RPLSPILHIVK ddPTM_A549_MK2206_60min_R1 4 DSRPLSPILHIVK 13 1 O95487-2;O95487;O95487-3 O95487-2 SEC24B Protein transport protein Sec24B 1 DS(0.5)RPLS(0.5)PILHIVK;DS(0.5)RPLS(0.5)PILHIVK;DS(0.5)RPLS(0.5)PILHIVK;DS(0.5)RPLS(0.5)PILHIVK 63.708999999999996 0.0019727 7590500.0 1991.4599999999998 1688.38 1648.58 1841.2199999999998 2335.9900000000002 1824.5700000000002 2205.13 1909.8000000000002 2414.0 2348.5 2435.74 True False 2327.5697614775845 1774.3113303459475 1882.3734335116744 2292.3189826555067 1992.3689654672407 2017.6447863484568 2605.7735773349455 2180.519998517205 1867.2328543658698 1817.972218895912 1830.8785349958666 1.2712857335906445 0.969103791666853 1.0281257863542128 1.2520322560123749 1.088203792542545 1.1020090889606786 1.4232367289951477 1.19096922971033 1.0198562158412574 0.9929507524102446 1.0 10.838320367019728 -8.782943501693447 11.150324585927116 1.0093375607934214 1.1612523110498711 0.2688883069128778 0.11825351829729037 0.5195650680318138 265.1246280828811 0.0206669494070229 0.02213094843335084 1.6483768184758245e-09 8.782943501693447 0.15191475025644974 DS(ph)RPLSPILHIVK ddPTM_A549_PD325901_60min_R1 4 DSRPLSPILHIVK 13 1 O95487-2;O95487;O95487-3 O95487-2 SEC24B Protein transport protein Sec24B 1 DS(0.5)RPLS(0.5)PILHIVK;DS(0.5)RPLS(0.5)PILHIVK;DS(0.5)RPLS(0.5)PILHIVK;DS(0.5)RPLS(0.5)PILHIVK 88.97399999999999 5.2798999999999994e-05 9914700.0 1618.5 1430.3 1653.0100000000002 1678.02 1754.19 1818.7199999999998 1844.43 1827.18 1732.69 1884.0 2292.38 True False 1782.808928523273 1550.8364006382872 1765.1931989566322 1781.6674843400765 1630.9817460269705 1803.9089473146942 1914.6207929608224 1790.73546150502 1659.8710648917831 1765.0439184745496 2010.4317925941075 0.8867791163523496 0.7713946856347742 0.8780169540986823 0.8862113556417395 0.8112594279672012 0.8972743835228889 0.9523430737684178 0.8907218181196747 0.825629136490133 0.877942701153304 1.0 10.973289675684493 -10.891967662504278 0.9791392581327341 1.0055127583156023 0.8640423328691108 0.05552873879993636 0.05832184576533009 0.3911328187543283 0.6214885162033842 0.04103434227198009 0.008386244663822534 1.2824260683352626e-11 10.891967662504278 -0.14147042544649147 DS(ph)RVSTSSQESK ddPTM_A549_MK2206_60min_R1 1 DSRVSTSSQESK 12 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;G3V3R9;G3V3Y4;A0A3B3IT62;G3V572 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 DS(0.556)RVS(0.429)T(0.012)S(0.003)S(0.001)QESK 52.823 0.0066971999999999995 13575000.0 1976.4 1898.0 1792.3 1703.7 1485.7 1138.5 1156.0 1293.0 1572.1 2870.2 1755.5 True False 2309.9680016592356 1994.6000929865384 2046.4750906131196 2121.1065764820005 1267.1554980948888 1258.9753143248638 1366.0302364936294 1476.286709646428 1216.021860127831 2221.819826559528 1319.5609006647849 1.7505580837500498 1.5115634996320926 1.5508758175406083 1.6074336360022512 0.9602857264537812 0.9540865553765662 1.0352157568517175 1.1187711828250488 0.9215352315419533 1.6837569417525116 1.0 10.3658422204415 -6.761118029349044 24.999811196590905 0.9788612327997666 1.5945524103142854 0.5020735985704003 0.22515026923417478 1.4258595460803267 110908.67132479468 0.010878965237211618 0.02158599788612042 1.7333328613236098e-07 6.761118029349044 0.6156911775145189 DS(ph)SDTTPLLNGSSQDR ddPTM_A549_MK2206_60min_R1 1 DSSDTTPLLNGSSQDR 16 0 B4DQA8;E9PCW1 B4DQA8 GOSR1 Golgi SNAP receptor complex member 1 1 DS(0.905)S(0.09)DT(0.002)T(0.002)PLLNGSSQDR 55.885 0.011423 513670.0 521.34 436.27 289.91 330.57 427.05 484.96 388.59 301.91 674.09 561.67 458.66 True False 609.3294464607493 458.47427954016655 331.02359734399886 411.559664839851 364.2315107097141 536.2781453096057 459.19177300956727 344.7066670605977 521.4096913005338 434.78835690324325 344.762063627975 1.7673912264264173 1.3298280985894546 0.9601508758260566 1.1937498589866773 1.0564721271153201 1.555502190891546 1.3319092250969666 0.9998393194228089 1.5123754795225246 1.2611258684552185 1.0 8.429457223984627 -11.100522499566162 1.439779809365949 1.0001215123706693 1.311140967753407 0.02865763791298559 0.24656149686786907 0.5786326998730696 2.1456434980900116 0.17163254132030886 0.03747800393819031 7.933731532980359e-12 11.100522499566162 0.3110194553827377 DS(ph)SEPRDEGGGR ddPTM_A549_PD325901_60min_R1 1 DSSEPRDEGGGR 12 1 K7EQ21;Q9P0U4;Q9P0U4-2;K7EJR0;K7EQZ1;A0A669KB29 K7EQ21 CXXC1 CXXC-type zinc finger protein 1 1 DS(0.5)S(0.5)EPRDEGGGR 50.843 0.016717 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DS(ph)SFER ddPTM_A549_PD325901_60min_R1 1 DSSFER 6 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DS(0.723)S(0.277)FER 71.342 0.04963 27522000.0 2064.7 1697.1 1933.1 1540.5 1811.1 1919.3 1891.3 1681.3 2507.7 2225.1 2208.5 True False 2274.306824048194 1840.120572972967 2064.2917906746266 1635.6531862706565 1683.894583955812 1903.6698571418876 1963.27445645907 1647.7651525456652 2402.310089761655 2084.6068062620593 1936.8685008349767 1.1742184991225522 0.9500493049371694 1.0657883019857664 0.8444833428627357 0.8693902467978035 0.9828596295108433 1.0136333239002595 0.850736718489314 1.2403062410927888 1.0762768899196786 1.0 10.919510293516428 -8.758706872145238 24.999078263738827 1.113477943459061 0.9659894175731788 0.24630230571929534 0.10611004944518064 76.84343313864782 703022.5758555332 0.020666995662513916 0.022920543586848818 1.7429829059641023e-09 8.758706872145238 -0.14748852588588213 DS(ph)SKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A549_MK2206_60min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-4;Q12906-6;Q12906-7 Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.249)S(0.249)KGEDS(0.249)AEET(0.249)EAKPAVVAPAPVVEAVS(0.002)T(0.002)PSAAFPSDATAENVK 53.093999999999994 0.00078777 25703000.0 237.82 324.5 236.03 262.42 360.53 308.73 255.41 212.26 527.66 461.64 269.17 True False 277.9582018592386 341.015663948436 269.5026031565111 326.7129117804813 307.4965145912032 341.3996036816118 301.81469091941017 242.3485050189873 408.14585249987357 357.35520337709556 202.32766028592422 1.3738022842078796 1.6854624002794352 1.3320106740504831 1.6147713630394334 1.5197947436186288 1.6873600139454719 1.4917124553948453 1.1978021427050887 2.017251877094276 1.766220213647953 1.0 7.660549754502707 -11.120645237229654 1.4836451550522471 1.0009669483460535 1.6030875852718833 0.0 0.3073707408069715 0.29297922968375567 1.1571407596536358 0.1720074567059868 0.03742631840218942 7.574513827959773e-12 11.120645237229654 0.6021206369258298 DS(ph)SKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK ddPTM_A549_MK2206_60min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK 49 2 Q12906-5;Q12906-2;Q12906-3;Q12906 Q12906-5 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.25)S(0.25)KGEDS(0.25)AEET(0.25)EAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK 80.009 1.1246e-08 19748000.0 267.74 0.0 449.11 499.74 665.95 522.73 638.7 460.21 705.23 691.06 844.37 True False 312.9279663854702 0.0 512.800551216458 622.1763224341811 567.9896371786308 578.0449416399086 754.7435225332882 525.446176834016 545.4965310208955 534.9490660379859 634.6896255735255 0.4930409349336672 0.0 0.8079548342279508 0.9802843742277385 0.8949092821004873 0.9107521508919719 1.1891537093445923 0.8278789437580713 0.8594697455909536 0.8428514418438604 1.0 9.309907450772682 -5.880156998454708 5.6755434818391155 0.9394025331255934 0.2528416573626118 0.7730084107453359 0.14261658235921507 0.05754999136946017 2.6088889877765293 0.017710053557072412 0.05706134630835799 1.3177802718386357e-06 5.880156998454708 -0.6865608757629815 down DS(ph)STCPGDYVLSVSENSR ddPTM_A549_MK2206_60min_R1 1 DSSTCPGDYVLSVSENSR 18 0 P46109 P46109 CRKL Crk-like protein 1 DS(0.566)S(0.427)T(0.007)CPGDYVLSVSENSR 146.78 7.2883e-17 3004800.0 682.29 895.01 678.13 753.42 1331.2 888.63 769.46 1119.9 1254.1 1017.8 1122.4 True False 797.44387161105 940.5621861032034 774.2990309643893 938.0079338223087 1135.3822434299761 982.6642367751457 909.2609219484331 1278.64925454991 970.0483523861789 787.8782731072005 843.6771033358899 0.9452003242211573 1.114836686196924 0.9177670318452634 1.111809162668319 1.3457544823021597 1.164739724344423 1.0777356862634122 1.5155670925454123 1.1497862731495478 0.9338623390298711 1.0 9.720547138293282 -6.442574151168864 9.088008738335855 1.1337106624758708 1.005964600769408 0.1691842401130913 0.15848127758934624 0.7336780232575306 78.4594135444286 0.022826413518564882 0.053088633031684644 3.6093238295531526e-07 6.442574151168864 -0.12774606170646274 DS(ph)SVEVR ddPTM_A549_PD325901_60min_R1 1 DSSVEVR 7 0 O15371-2;O15371-3;O15371;B0QYA6;B0QYA5 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 1 DS(0.684)S(0.316)VEVR 64.265 0.025907 1108400.0 281.95 333.36 180.84 198.61 266.42 341.15 270.29 267.1 279.61 331.75 220.04 True False 310.57335643938046 361.45341712702185 193.11288987926102 210.87768862396314 247.70757829910423 338.3717875079222 280.57603385836336 261.77248096410347 267.8589640699673 310.8032483831907 192.97647494848462 1.609384545563331 1.8730439408405217 1.0007068992778152 1.0927637095674863 1.2836154166730953 1.7534354257338935 1.4539390562153423 1.3564994439554565 1.3880394703109418 1.6105758407399664 1.0 7.592281174346878 -10.52078796433897 0.5823343319395142 0.9550371899339855 1.429041795250593 0.0 0.3040161597459018 1.1506172064233784 0.6116429504530254 0.2820408615730842 0.05776630662398665 3.014477423737689e-11 10.52078796433897 0.4740046053166075 DS(ph)YGGPPR ddPTM_A549_MK2206_60min_R1 2 DSYGGPPR 8 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DS(1)YGGPPR;DS(1)YGGPPR 112.11 0.0014644 22598000.0 2690.7 2920.3 2514.7 2531.5 3448.7 3177.2 2426.1 3149.1 4312.8 3713.3 3827.4 True False 3144.824378700921 3068.9307963901933 2871.3222732605072 3151.717613643352 2941.4007984652635 3513.409195145329 2866.890966052939 3595.494568714282 3335.9576861263963 2874.4629510011478 2876.950949133807 1.0931101830734253 1.0667303164533228 0.9980435273409877 1.095506204091617 1.022402137009274 1.2212266588010987 0.9965032483143665 1.2497587314781347 1.159546250564608 0.9991351961932446 1.0 11.490324908573953 DS(ph)YGGPPR ddPTM_A549_PD325901_60min_R1 1 DSYGGPPR 8 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DS(1)YGGPPR 114.5 0.0013253 16597000.0 2160.7 1927.9 1787.0 2101.8 2255.1 1774.2 1726.8 2207.8 2545.5 2411.9 1987.2 True False 2380.05267337673 2090.3708989656375 1908.2765661039566 2231.6234124658667 2096.709555672659 1759.7515034341343 1792.514318941218 2163.7636970144067 2438.5214872146967 2259.612222382572 1742.7869978986935 1.3656589567436515 1.199441412798025 1.0949568526760853 1.2804911989569416 1.2030784933561565 1.0097341244546207 1.0285332178301088 1.2415537295282164 1.3992079870660394 1.2965509985483155 1.0 10.767180539809393 -11.171956980392443 1.589853305598663 1.0004805076278578 1.2227100924045178 0.0 0.14691914157058097 0.4339886736306206 1.9766686402850304 0.09938334350196659 0.021207890451243896 6.73043322168416e-12 11.171956980392443 0.22222958477666 DS(ph)YSSSR ddPTM_A549_MK2206_60min_R1 1 DSYSSSR 7 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DS(0.446)YS(0.446)S(0.102)S(0.006)R 74.26899999999999 0.018662 183610000.0 1549.3 1808.8 1366.7 1043.6 1990.1 1530.3 1378.8 1969.8 1858.9 2364.9 2195.8 True False 1810.7839632516966 1900.8601939905413 1560.5186109138822 1299.2820468489845 1697.3589262695286 1692.2353302690726 1629.3101125237176 2249.0251822594983 1437.8621180533196 1830.6674475056195 1650.5222590029825 1.0970975722226988 1.1516719532996655 0.9454695944885542 0.7871945014748429 1.0283768770830382 1.0252726499376552 0.9871482215016728 1.3626142695088816 0.8711558479204499 1.1091443556850036 1.0 10.68870687959132 DS(ph)YYVYTQQELK ddPTM_A549_MK2206_60min_R1 2 DSYYVYTQQELK 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 DS(0.999)YYVYT(0.001)QQELK;DS(1)YYVYTQQELK 166.86 6.053e-15 15070200.0 10205.6 11480.5 10237.5 10372.2 17485.6 12193.8 12184.400000000001 12315.900000000001 16566.2 13183.400000000001 13502.6 True False 11928.055777035763 12064.808412819773 11689.3314401338 12913.389465625756 14913.491403034252 13484.13982241065 14398.147762571787 14061.716540861904 12813.982150785365 10205.260783731055 10149.531767198136 1.1752321240656212 1.188705911716198 1.15171139992015 1.272313813269694 1.4693772821355726 1.3285479696698423 1.4186021673536293 1.3854547050443649 1.262519537324703 1.0054907967984323 1.0 13.309125552011826 -10.269375126627073 0.8442003525275594 1.0121729590579496 1.2974708728178945 0.565525102714221 0.09781737541597084 0.35854294427428907 0.49266604264925795 0.05676597837524831 0.021244295253735616 5.378050468208892e-11 10.269375126627073 0.28529791375994495 DS(ph)YYVYTQQELK ddPTM_A549_PD325901_60min_R1 1 DSYYVYTQQELK 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 DS(1)YYVYTQQELK 156.24 8.9391e-14 8940600.0 6684.5 7124.9 7560.2 7280.1 9105.9 8191.9 7457.1 8167.3 8779.5 9387.9 9185.7 True False 7363.1055191311825 7725.340327838729 8073.280635175784 7729.775242693291 8466.332997649617 8125.187882415793 7740.884021181691 8004.396794377103 8410.528146533663 8795.146391850965 8055.9171329498995 0.9139996598295413 0.9589647212532683 1.0021553724969272 0.9595152376974386 1.0509458895773711 1.0085987415613507 0.9608941965800919 0.9936046588212694 1.0440187017482283 1.0917622719674596 1.0 12.975833127825911 -3.1164742519106214 0.5092327705994603 1.0160886404210332 1.0687824516121573e-10 0.45226087815729643 0.035493103983452755 17.74064124548182 0.524231650881523 0.00542236336151658 17.18092998644987 0.0007647610276093936 3.1164742519106214 -1.016088640314155 DSAIPVES(ph)DT(ph)DDEGAPR ddPTM_A549_PD325901_60min_R1 3 DSAIPVESDTDDEGAPR 17 0 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 2 DSAIPVES(1)DT(1)DDEGAPR;DSAIPVES(1)DT(1)DDEGAPR;DS(0.005)AIPVES(0.996)DT(0.999)DDEGAPR 97.76700000000001 2.3208000000000003e-06 4982600.0 3570.3 3561.45 2893.3 3643.77 3644.2 3785.2000000000003 3750.7999999999997 3725.5 3359.2 3908.8999999999996 4442.54 True False 3932.7542276840577 3861.585890409864 3089.6567368262895 3868.8373972979134 3388.2439638075048 3754.3745861790585 3893.538746516514 3651.1919799017887 3218.024505932671 3662.091386902951 3896.1357435813547 1.0093986674265725 0.9911322768390682 0.7930054136117588 0.9929934817264995 0.8696421754271343 0.9636149336850394 0.9993334428685862 0.9371316145534467 0.8259528716970834 0.939929106149862 1.0 11.927828227272302 -8.545233221090164 24.94953554280115 0.9159022049225543 0.9430077001024741 0.017705137280731753 0.0716324970685266 919.0624567627951 1025747.8632711262 0.014187855588476371 0.016088050193634046 2.8494876491932585e-09 8.545233221090164 0.027105495179919892 DSAIPVES(ph)DTDDEGAPR ddPTM_A549_MK2206_60min_R1 1 DSAIPVESDTDDEGAPR 17 0 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 DSAIPVES(0.99)DT(0.01)DDEGAPR 232.78 2.8133999999999997e-64 64220000.0 3302.4 3899.7 3245.5 3230.9 3913.2 3204.1 3218.0 3447.3 4542.0 4736.0 4854.2 True False 3859.764384071777 4098.17807303456 3705.7607022177517 4022.470645040613 3337.573463784694 3543.1557352905556 3802.668945533305 3935.965331913482 3513.2442520835875 3666.134310705148 3648.768170895469 1.0578266974754182 1.1231675680915616 1.0156196635831471 1.1024188045505317 0.9147123926389649 0.9710553176693069 1.04217883061616 1.0787107175810322 0.9628576241448024 1.0047594527786665 1.0 11.833193775040677 -6.740205340765888 24.99990964196669 0.9892952570145593 1.0739918276782057 0.3832914656996639 0.04732361176482821 183.87220926254577 216480.90156031653 0.0067922674139349664 0.014128202443107984 1.81884068086925e-07 6.740205340765888 0.08469657066364633 DSAIPVES(ph)DTDDEGAPR ddPTM_A549_PD325901_60min_R1 2 DSAIPVESDTDDEGAPR 17 0 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 DSAIPVES(0.903)DT(0.097)DDEGAPR;DSAIPVES(0.725)DT(0.275)DDEGAPR 252.47 4.693299999999999e-86 180327000.0 6738.9 6905.2 7192.7 7026.9 8273.2 6472.799999999999 7731.4 6975.299999999999 7113.5 7226.2 8143.6 True False 7423.028167084019 7487.125437801504 7680.839875218762 7460.935653752207 7692.118972990574 6420.0876628499955 8025.62265778441 6836.172169483004 6814.5443328626 6769.936498768997 7141.988826533714 1.039350291267076 1.0483250001715976 1.0754483186368373 1.0446579846265722 1.0770275843071935 0.8989215495546938 1.1237237767675923 0.9571804626864511 0.954152197430693 0.9479063413845624 1.0 12.802110161526837 -7.400793529425188 0.8752280556063587 0.9795146401918974 1.0581014597746903 0.2578710448967596 0.056401514735145264 0.5801890037847306 0.8828954230927962 0.00954648431830679 0.021260286874080665 3.973804256078321e-08 7.400793529425188 0.0785868195827929 DSAIPVESDT(ph)DDEGAPR ddPTM_A549_MK2206_60min_R1 1 DSAIPVESDTDDEGAPR 17 0 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 DSAIPVESDT(1)DDEGAPR 458.84 0.0 66087000.0 8029.7 9700.8 7908.2 7226.0 11215.0 9003.8 7797.0 7981.3 11402.0 11754.0 12019.0 True False 9384.917052683239 10194.529284533091 9029.70167471219 8996.370324387462 9565.288356420668 9956.576139761277 9213.613973997257 9112.673716706127 8819.465205252542 9098.763236492472 9034.350592475106 1.038803725471992 1.128418604102471 0.9994854176052468 0.995796015695995 1.0587687801697434 1.1020798936067757 1.0198424202921086 1.0086694802719145 0.9762146282654177 1.0071297481050843 1.0 13.141205185620484 -8.175727299253976 2.743126353433803 0.9893962349040173 1.0525041295479554 0.3127153698757208 0.03770976262387821 0.22579018252826694 3.326144215458979 0.006268735048218589 0.008203595775689063 6.672255997830294e-09 8.175727299253976 0.06310789464393807 DSALAEAPEGLS(ph)PAPPAR ddPTM_A549_MK2206_60min_R1 2 DSALAEAPEGLSPAPPAR 18 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR 161.91 7.129300000000001e-23 41139000.0 2497.4 3333.6000000000004 2233.3 2601.6000000000004 4226.4 2458.8 2257.12 3074.6 3947.2999999999997 3642.7999999999997 4290.9 True False 2918.9000644321873 3503.266001043161 2550.0155218804225 3238.992116790261 3604.702158678226 2718.988583980654 2667.209487365485 3510.433965567601 3053.2428525428318 2819.8889499655215 3225.3511071845783 0.9049867649851326 1.0861657799795867 0.7906164126442473 1.0042293099735087 1.1176154281773016 0.8430054569637443 0.8269516709124121 1.088388162686534 0.9466389087816302 0.8742889863010956 1.0 11.655240503499487 -11.226630885372952 0.5600700674352731 1.0161294291278207 0.9559371339886865 0.0 0.1120193445885801 8.302615089280138 2.640047585009708 0.2858196935868773 0.0217383037388706 5.934294766034221e-12 11.226630885372952 -0.060192295139134155 DSALAEAPEGLS(ph)PAPPAR ddPTM_A549_PD325901_60min_R1 3 DSALAEAPEGLSPAPPAR 18 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR;DS(0.001)ALAEAPEGLS(0.999)PAPPAR 197.1 1.5511999999999998e-48 61892400.0 6807.85 6440.92 6466.36 6567.0599999999995 7752.4400000000005 7168.890000000001 6688.03 7024.08 7623.240000000001 7543.009999999999 7923.89 True False 7498.977920325716 6983.718932810711 6905.2060749815255 6972.692381324623 7207.935358866099 7110.508936677902 6942.546641480444 6883.97921411584 7302.861733331203 7066.743061301855 6949.301763677277 1.079098041118533 1.0049526082337257 0.993654659101691 1.0033658946528419 1.0372172059847296 1.0231976072536129 0.9990279423132636 0.9906001276411873 1.0508770494759514 1.0168997262773105 1.0 12.762652313910435 -11.316009432159168 1.90891249028718 0.9998888683060377 1.0236007374292306 0.0017193693248548358 0.026302432883885906 0.7222721401216176 4.752126941786586 0.020778377611108637 0.004044255331096606 4.830483109140017e-12 11.316009432159168 0.023711869123192897 DSAPSTPT(ph)SPTEFLTPGLR ddPTM_A549_PD325901_60min_R1 1 DSAPSTPTSPTEFLTPGLR 19 0 Q9NZJ4-2;Q9NZJ4 Q9NZJ4-2 SACS Sacsin 1 DSAPS(0.008)T(0.046)PT(0.472)S(0.472)PT(0.002)EFLTPGLR 97.579 1.4815000000000001e-06 5768900.0 1238.9 1323.5 1182.8 1443.9 1533.4 1119.9 995.81 1501.7 1282.1 1389.0 1200.6 True False 1364.6722159700244 1435.0359898236547 1263.0719207542018 1533.0864236651742 1425.69927394282 1110.7799057016614 1033.7060944781401 1471.7474154391407 1228.2177956228493 1301.2983029517763 1052.933811230461 1.2960664776974584 1.3628928756183336 1.1995739022552356 1.4560140507536798 1.3540255415264366 1.0549380159077628 0.9817389122210337 1.397758719248699 1.1664719876243226 1.235878541530617 1.0 10.04019903421581 -14.342916470576315 0.05553926394458684 4.773349793209114e-06 1.7464742248747849 0.10579747377061766 0.14725742320745688 199.23307083968734 0.9455938155963063 29.97234523361744 7.10458150788804 4.540289332748497e-15 14.342916470576315 1.7464694515249917 DSAPSTPTS(ph)PTEFLTPGLR ddPTM_A549_PD325901_60min_R1 1 DSAPSTPTSPTEFLTPGLR 19 0 Q9NZJ4-2;Q9NZJ4 Q9NZJ4-2 SACS Sacsin 1 DSAPS(0.003)T(0.02)PT(0.154)S(0.818)PT(0.004)EFLTPGLR 105.53 1.5711e-09 7143300.0 1413.9 1650.5 1146.6 1282.2 1289.4 1427.4 1438.2 1692.4 1252.0 1581.3 1474.0 True False 1557.4380871418327 1789.5934274302538 1224.4151710659187 1361.39858191252 1198.836992188517 1415.7757276529612 1492.9314880132379 1658.6437543378847 1199.3827939472799 1481.4564481336538 1292.7073444558555 1.2047878383466688 1.3843763130962596 0.9471712033796147 1.0531375007276524 0.9273846840354637 1.0952020453236533 1.1548874495191048 1.2830775360343174 0.9278069000622418 1.1460106995502908 1.0 10.336179985571345 -2.0000000000000004 0.323718757725511 0.9884118517653863 3.9074050176678816 0.021302058836559334 0.14163494575217084 47.768124904717496 0.595539007985198 0.040549382465966885 84.24728845848917 0.00999999999999999 2.0000000000000004 2.9189931659024952 DSAYFS(ph)DNDSEPEKR ddPTM_A549_MK2206_60min_R1 2 DSAYFSDNDSEPEKR 15 1 Q8IWU2 Q8IWU2 LMTK2 Serine/threonine-protein kinase LMTK2 1 DSAYFS(1)DNDSEPEKR;DSAYFS(0.999)DNDS(0.001)EPEKR 188.6 6.5572e-34 50117000.0 12985.099999999999 13885.1 11268.4 10902.7 16428.5 12335.599999999999 11700.5 13552.1 17704.3 19051.0 17908.4 True False 15176.667424785128 14591.792281942759 12866.428561660916 13573.861989440798 14011.889412702354 13640.945004291421 13826.329396274836 15473.151676565627 13694.304317957602 14747.365868505869 13461.250033304039 1.1274337366319644 1.0839849379397666 0.9558123153368747 1.0083656388417235 1.040905516058018 1.0133490552915074 1.027120762341355 1.1494587529600897 1.017312974952324 1.0955420805660614 1.0 13.71652476669768 -4.934130465089713 0.006600702252035731 1.7012453016688435e-07 2.1160658736296534 0.0 0.06029553274682571 22231.37276250129 19.668328245089768 2980.3970055714303 3333.0842724919016 1.1637763703590865e-05 4.934130465089713 2.1160657035051234 DSAYFS(ph)DNDSEPEKR ddPTM_A549_PD325901_60min_R1 1 DSAYFSDNDSEPEKR 15 1 Q8IWU2 Q8IWU2 LMTK2 Serine/threonine-protein kinase LMTK2 1 DSAYFS(1)DNDSEPEKR 146.1 5.0113e-14 33597000.0 10545.0 9645.4 10897.0 10768.0 12040.0 11180.0 10623.0 9988.4 11415.0 11995.0 11853.0 True False 11615.520637181295 10458.251708534239 11636.535948984229 11433.11490409765 11194.351935745119 11088.953786717186 11027.264078128648 9789.173526251787 10935.267246731786 11237.63365292049 10395.156142357697 1.1173974183851758 1.006069708363441 1.119419063035351 1.0998502328897715 1.0768815573756412 1.0667423975992467 1.0608079308395635 0.941705289674613 1.0519579597436992 1.0810452001899138 1.0 13.343623808175101 -8.015684017155731 24.045977440272242 1.0181636269693584 1.078702180293134 0.3148221409544316 0.042954729905063174 361.31148576251275 553946.167726969 0.006175477613595592 0.008104704499660591 9.645305389987688e-09 8.015684017155731 0.06053855332377567 DSAYISS(ph)SPLGSHQVFDFR ddPTM_A549_MK2206_60min_R1 2 DSAYISSSPLGSHQVFDFR 19 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 DS(0.002)AY(0.008)IS(0.06)S(0.465)S(0.465)PLGSHQVFDFR;DS(0.002)AY(0.005)IS(0.126)S(0.644)S(0.219)PLGS(0.004)HQVFDFR 78.021 0.00010808 6244900.0 1025.99 1194.12 891.1800000000001 915.19 1472.69 1216.96 971.13 1027.08 1722.3400000000001 1236.4 2034.3600000000001 True False 1199.1520289528219 1254.895607501098 1017.5627245732289 1139.4115910844398 1256.0592518606468 1345.7378994473308 1147.5717504896709 1172.6717353005815 1332.2327400118102 957.096381282907 1529.172266520314 0.7841837412350768 0.8206371740946217 0.6654336773244843 0.745116567983025 0.8213981376466201 0.8800433599999857 0.7504528924664657 0.7668669913619595 0.8712116804494194 0.6258917992678574 1.0 10.578535225079099 -9.645264699005418 0.4451977770595932 1.0138669176444337 0.7632968357058179 0.0 0.12297431799917567 0.43228361290383216 0.18725887687450776 0.04422104795893248 0.019126851263821753 2.2632644455910874e-10 9.645264699005418 -0.25057008193861585 DSAYISS(ph)SPLGSHQVFDFR ddPTM_A549_PD325901_60min_R1 1 DSAYISSSPLGSHQVFDFR 19 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 DSAY(0.001)IS(0.046)S(0.496)S(0.448)PLGS(0.007)HQVFDFR 66.827 0.00053244 7674000.0 968.97 903.5 1205.2 1197.2 1529.2 1426.1 1209.5 1705.3 1316.9 1465.8 2071.3 True False 1067.339121081987 979.6411158335256 1286.9921194563447 1271.1483249615253 1421.7942674536064 1414.4863144219478 1255.5281843637952 1671.2864537180299 1261.5552726431097 1373.2491378450077 1816.5432310525189 0.587566044582139 0.5392886329855823 0.7084841678723229 0.6997622204812667 0.7826922272748819 0.77866922748785 0.6911633936927186 0.9200367077141752 0.6944812824036976 0.7559683217939915 1.0 10.826979984840438 -14.999999999999998 0.10334036905796465 1.8987994128098977 0.5141498839980216 0.3662868647140781 0.10016309336930374 48.592389487976824 0.3593748086476512 9.568056918438991 0.5352404909239044 1.000000000000004e-15 14.999999999999998 -1.384649528811876 DSAYISSS(ph)PLGSHQVFDFR ddPTM_A549_PD325901_60min_R1 1 DSAYISSSPLGSHQVFDFR 19 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 DS(0.001)AYIS(0.012)S(0.269)S(0.714)PLGS(0.005)HQVFDFR 92.8 1.2033e-06 7092000.0 1508.5 2039.1 1835.5 2004.3 1835.9 2120.1 1900.8 2086.3 1772.8 2155.5 2678.3 True False 1661.6418095009942 2210.9421132220714 1960.0680677581483 2128.101058904432 1706.952717511167 2102.8346085169132 1973.13598415767 2044.6871098293118 1698.2953810780648 2019.401362140068 2348.886079142549 0.7074169429739093 0.9412726027262959 0.8344670629891352 0.9060043727966945 0.7267073242369775 0.89524759297162 0.8400305156042114 0.8704922422528538 0.7230216042227218 0.8597272469157984 1.0 11.197761029071545 -11.041488122365601 1.346375811970244 0.9997876614707859 0.8209280741992303 0.10587684438460376 0.08473621150040785 0.33017218009634114 1.0690002399124339 0.05320361242313074 0.011965392098502697 9.088911562297676e-12 11.041488122365601 -0.1788595872715556 DSAYQSITHYRPVS(ph)ASR ddPTM_A549_PD325901_60min_R1 1 DSAYQSITHYRPVSASR 17 1 P50402;Q5HY57 P50402 EMD Emerin 1 DSAYQS(0.001)IT(0.006)HYRPVS(0.822)AS(0.171)R 66.845 0.00058843 17802000.0 4621.0 4991.0 4405.9 5233.2 5906.0 5173.6 5206.4 4296.4 5432.0 5120.6 7121.8 True False 5090.120518199599 5411.609085916025 4704.910868829 5556.442878540477 5491.1829345939095 5131.467916901612 5404.532401051399 4210.704931539401 5203.71193028884 4797.284442112935 6245.863748809844 0.8149586226836164 0.8664308578532813 0.7532842626811265 0.8896196109944382 0.8791711051398232 0.8215785875699607 0.8652978384424793 0.6741589475661801 0.8331452845541841 0.7680738221398221 1.0 12.608685382509146 -10.402188540502289 0.8882952377061124 0.9943049649263913 0.8238052073646683 0.0 0.08938075498327253 0.3272854112788866 0.4880820129764926 0.032946540503728305 0.011298163055464272 3.961060351922021e-11 10.402188540502289 -0.17049975756172298 DSDAESDAGKKES(ph)DGEESRLPQPK ddPTM_A549_PD325901_60min_R1 1 DSDAESDAGKKESDGEESRLPQPK 24 3 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DS(0.003)DAES(0.201)DAGKKES(0.782)DGEES(0.014)RLPQPK 54.324 0.00090566 10715000.0 2822.6 2749.4 2502.3 3127.0 3651.6 4078.6 2859.9 3292.1 3310.2 3686.8 3650.7 True False 3109.148274111705 2981.101587020138 2672.1211255522835 3320.147688067736 3395.124213336118 4045.385233855521 2968.735059497328 3226.436482897512 3171.083805530581 3454.014818806774 3201.6870436940235 0.9710968722678311 0.9311033671737698 0.8345978507847098 1.0369994452165554 1.0604172634621127 1.2635167580864057 0.927240863639214 1.007730124420572 0.9904415273117595 1.0788108805355383 1.0 11.64461657984405 -6.285200460625801 24.251586516717783 1.0174029652705292 0.9141497454774512 0.2745104107034735 0.08826027993149017 593.0952158513029 605337.8322101809 0.01231351421557899 0.028630973033944844 5.18560627684536e-07 6.285200460625801 -0.103253219793078 DSDAGSS(ph)TPTTSTR ddPTM_A549_MK2206_60min_R1 1 DSDAGSSTPTTSTR 14 0 K7EP28;A0A2R8YF80;Q9HBD4;A0A2R8Y4P4;A0A2R8Y7S2;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8YFK5;A0A2R8Y6N0;A0A2R8Y7F3;A0A2R8Y7Y7;A0A2R8Y526;A0A2R8YF58;A0A2R8Y4C5;A0A2R8Y6V2;A0A2R8YDA1;A0A2R8Y523;A0A2R8Y5K3;K7EQF0;A0A0A0MT49;P51532-5;P51532-2;P51532-3;P51532-4;P51532 K7EP28 SMARCA4 Transcription activator BRG1 1 DS(0.008)DAGS(0.059)S(0.464)T(0.464)PT(0.001)T(0.001)S(0.001)T(0.001)R 45.257 0.047972 586330.0 0.0 98.99799999999999 222.88 0.0 136.61 0.0 102.48 103.4 100.96 116.43 225.49 True False 0.0 104.03657534535363 254.48773542144278 0.0 116.51484996617275 0.0 121.0992894773938 118.05726664921933 78.09272119999092 90.12838213585317 169.494609792596 0.0 0.6138046246583249 1.501450315929513 0.0 0.6874251051921206 0.0 0.7144728061003138 0.6965251980206417 0.4607386706606774 0.5317477779744134 1.0 7.405095583790377 -10.824545765949829 0.7633952611752658 1.0450768163542903 0.5286910460442962 0.0001823848828335084 0.4361439846746672 1.289042775664954 1.1347563654167603 0.4266731934879855 0.07496008049196456 1.4978014064251e-11 10.824545765949829 -0.5163857703099941 DSDDS(ph)AATPQDETVEER ddPTM_A549_PD325901_60min_R1 1 DSDDSAATPQDETVEER 17 0 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;A0A1W2PRD7 E7EPJ7 TRIO Triple functional domain protein 1 DS(0.004)DDS(0.62)AAT(0.375)PQDET(0.001)VEER 67.358 0.0019882000000000003 1223100.0 0.0 0.0 0.0 141.1 194.22 0.0 169.89 238.04 121.02 0.0 0.0 True False 0.0 0.0 0.0 149.8154265386496 180.57865722262596 0.0 176.3552569173751 233.29210546123252 115.93395025838646 0.0 0.0 0.0 DSDKEGTSNST(ph)SEDGPGDGFTILSSK ddPTM_A549_PD325901_60min_R1 2 DSDKEGTSNSTSEDGPGDGFTILSSK 26 1 Q9P0M6;Q5SQT3 Q9P0M6 H2AFY2 Core histone macro-H2A.2;Histone H2A 1 DSDKEGT(0.008)S(0.005)NS(0.092)T(0.803)S(0.092)EDGPGDGFTILSSK;DSDKEGT(0.008)S(0.055)NS(0.368)T(0.495)S(0.073)EDGPGDGFTILSSK 207.23 9.889499999999999e-70 27124000.0 4492.700000000001 4710.1 4847.9 5398.5 6567.6 5175.6 5322.8 5975.5 5487.4 6208.8 5635.9 True False 4948.795596649066 5107.036657097386 5176.907646790916 5731.953084116936 6106.3144329900015 5133.451629564709 5525.362066747923 5856.313964810937 5256.783660947526 5816.775308399563 4942.7200289136745 1.0012291952001835 1.0332441706636224 1.0473803121575374 1.1596758567320111 1.2354158028918472 1.038588388485551 1.1178788267241393 1.1848362704245774 1.0635406476993756 1.1768368983824462 1.0 12.271089474705004 -9.585084233693898 1.2395136187602105 1.0139803172434128 1.1019552221467246 0.0 0.08427257645588505 0.4503823916380107 1.420215954383105 0.018817392253706985 0.013872463687534465 2.5996552974766936e-10 9.585084233693898 0.08797490490331183 DSDKRPS(ph)LGLAPGGLAVVGR ddPTM_A549_MK2206_60min_R1 1 DSDKRPSLGLAPGGLAVVGR 20 2 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 DS(0.037)DKRPS(0.963)LGLAPGGLAVVGR 87.509 1.0372e-06 3467800.0 568.87 541.02 382.37 535.74 702.25 469.93 627.45 447.55 801.85 927.46 851.82 True False 664.8813484638174 568.5556071167421 436.59581565459945 666.9963240502823 598.9499552649495 519.6576806857121 741.4495431556471 510.99158306439165 620.2322552913306 717.9461418510555 640.2895849639854 1.0384072520892484 0.8879663522072155 0.6818724307051736 1.0417104068431773 0.9354360422692787 0.8115978970904884 1.1579909474825392 0.7980632436698679 0.968674596395656 1.121283492205231 1.0 9.322580732858473 -8.617414948339679 0.36042517302185806 1.0037847455164406 0.8942840680998313 0.1078609124306723 0.1304627812894571 2.3093669522103757 0.8375066949093963 0.0765392854895603 0.07988709566860588 2.413154075240313e-09 8.617414948339679 -0.1095006774166093 DSDKRPS(ph)LGLAPGGLAVVGR ddPTM_A549_PD325901_60min_R1 1 DSDKRPSLGLAPGGLAVVGR 20 2 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 DS(0.029)DKRPS(0.971)LGLAPGGLAVVGR 94.542 4.6396000000000003e-07 4354000.0 812.82 630.53 822.14 726.76 767.9 1055.2 699.14 942.45 1073.9 1071.7 1404.7 True False 895.3368880335416 683.6669759452274 877.9353643294389 771.6503146082849 713.9653531111858 1046.6068010504448 725.7461552840875 923.6520954122773 1028.767717587847 1004.0326791025342 1231.9308051269597 0.7267753061352098 0.5549556623634964 0.7126498993902186 0.6263747212074631 0.5795498822984675 0.8495662229524199 0.5891127588203251 0.749759719919568 0.8350856341171085 0.8150073648000555 1.0 10.266705509928933 -9.175692890758018 0.5008926405154117 0.9959664180716724 0.6387733529606707 0.47637152835583085 0.09510835582618218 0.2832773162010984 0.16818113117370692 0.03676553161199794 0.02524993318598066 6.672784651538941e-10 9.175692890758018 -0.3571930651110017 DSDQVAQS(ph)DGEESPAAEEQLLGEHIK ddPTM_A549_MK2206_60min_R1 2 DSDQVAQSDGEESPAAEEQLLGEHIK 26 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DS(0.002)DQVAQS(0.948)DGEES(0.049)PAAEEQLLGEHIK;DS(0.001)DQVAQS(0.997)DGEES(0.002)PAAEEQLLGEHIK 109.77 6.199699999999999e-13 8035600.0 2103.96 1907.1399999999999 1994.52 1604.46 2721.2 2390.4 2275.47 2544.4 3157.4 3005.6000000000004 3195.1000000000004 True False 2459.0570111166576 2004.2052799464407 2277.372927372469 1997.5527720269458 2320.9150847518426 2643.3505413808984 2688.8934448392392 2905.076491898197 2442.2539413317304 2326.632872520144 2401.668489726034 1.0238952718229526 0.8345053817877532 0.9482461618307098 0.8317354291702487 0.966376123382706 1.1006308958495907 1.1195939224509583 1.2096076141755887 1.0168988566820587 0.9687568798412933 1.0 11.229821309462832 -7.0035664078036834 23.8086779800899 1.039797710316447 0.9060005950836916 0.44189893682677905 0.0811111769798528 69.3546479365262 463011.2413872805 0.012211908808988817 0.022713672162085342 9.918216685701464e-08 7.0035664078036834 -0.1337971152327555 DSDQVAQS(ph)DGEESPAAEEQLLGEHIK ddPTM_A549_PD325901_60min_R1 2 DSDQVAQSDGEESPAAEEQLLGEHIK 26 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DS(0.024)DQVAQS(0.975)DGEES(0.001)PAAEEQLLGEHIK;DS(0.002)DQVAQS(0.992)DGEES(0.007)PAAEEQLLGEHIK 109.09 7.2814e-13 11932200.0 2549.3 3090.0 2794.8999999999996 3367.6 3009.2 2940.3 3134.6 3461.5 2675.7 3708.3 3179.7 True False 2808.1030593045302 3350.405144355942 2984.5787210990184 3575.6090036254886 2797.8441731764283 2916.3551716533584 3253.8889183189344 3392.4576670057836 2563.2496339973936 3474.157305137564 2788.617057779025 1.006987693584943 1.2014575952656437 1.0702719876052347 1.282215854504332 1.0033088499446934 1.045806975725835 1.1668468100494487 1.2165376588880523 0.9191830864144812 1.2458352054636477 1.0 11.445334116921877 -8.772175895800759 24.999896760319736 0.9618364497364842 1.1250069482481087 0.0 0.12159037589107659 141.65294707681616 329836.83164404216 0.014589622881957427 0.015607852724315975 1.689756416255804e-09 8.772175895800759 0.16317049851162446 DSDQVAQS(ph)DGEESPAAEEQLLGEHIKEEK ddPTM_A549_MK2206_60min_R1 2 DSDQVAQSDGEESPAAEEQLLGEHIKEEK 29 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DSDQVAQS(1)DGEESPAAEEQLLGEHIKEEK;DSDQVAQS(1)DGEESPAAEEQLLGEHIKEEK 205.09 4.1544999999999993e-78 26699000.0 2750.6000000000004 2633.5 2409.01 3075.7 3772.2 2468.6 2518.8 2761.3 3873.8 3213.6 3724.8 True False 3214.8340342865267 2767.533901412038 2750.643842011888 3829.246638073419 3217.314377003123 2729.82561347594 2976.433356124703 3152.7227311265883 2996.3904851874504 2487.645528057868 2799.829360749752 1.148224988049144 0.9884652044190773 0.9824326727094922 1.3676714344648506 1.1491108787221143 0.9749971379487691 1.0630766995484535 1.126041027829759 1.0702046800398801 0.8884989788776677 1.0 11.451123187581667 -7.242528712125647 24.56022342900667 1.0405238845441112 1.1247936050859404 0.17305869022706255 0.11149086629268512 1098.889992224596 1427182.7172500093 0.01540603855922913 0.026651317737326433 5.720991307199366e-08 7.242528712125647 0.08426972054182924 DSDQVAQS(ph)DGEESPAAEEQLLGEHIKEEK ddPTM_A549_PD325901_60min_R1 1 DSDQVAQSDGEESPAAEEQLLGEHIKEEK 29 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DSDQVAQS(1)DGEESPAAEEQLLGEHIKEEK 209.24 4.563599999999999e-90 13603000.0 2640.4 2057.4 2188.4 2513.0 2901.9 1908.4 2568.9 2154.4 2502.3 2824.2 2886.9 True False 2908.4514642402537 2230.7843184459275 2336.917983918243 2668.222302562908 2698.0805550115238 1892.858623128003 2666.660895256019 2111.428801905895 2397.1370329826514 2645.879530019011 2531.8296015668966 1.1487548223783597 0.8810957566280692 0.9230155072331776 1.05387120085475 1.0656643532968166 0.7476248093301984 1.0532544897988705 0.8339537544703545 0.9468003026345506 1.0450464471943655 1.0 11.305964595728968 -5.245397896439987 23.76805260125035 0.959300457365573 1.1487551093345594 0.2421559351717988 0.09825768614431958 1554.9864114450131 2303889.384418282 0.011915290306834246 0.39332899519656367 5.683319919192438e-06 5.245397896439987 0.18945465196898637 DSDRNS(ph)SEEGTAEK ddPTM_A549_PD325901_60min_R1 1 DSDRNSSEEGTAEK 14 1 C9J0Y7;Q9UKT7 C9J0Y7 FBXL3 F-box/LRR-repeat protein 3 1 DS(0.175)DRNS(0.77)S(0.055)EEGTAEK 50.831 0.0069732 6418300.0 680.66 529.84 687.81 472.2 796.9 551.67 543.97 571.91 621.36 582.84 725.05 True False 749.7601021245919 574.491476273642 734.4889227375274 501.3667215559908 740.9284931557539 547.1773824256054 564.6710760218053 560.5028063952844 595.2464000376052 546.0393829319033 635.8734464706357 1.1791027071283993 0.9034682600166913 1.155086639981979 0.7884693476961279 1.16521376583378 0.8605130241916364 0.8880243060249907 0.8814691185900434 0.9361082827746187 0.8587233606980302 1.0 9.312595854157541 -6.233768568543496 24.99898064962365 0.9535042283000877 1.061644079807539 0.23176773425557295 0.11645406124024985 992.9770713630601 897096.4387451845 0.014164997657923924 0.037468368098015604 5.837560995540193e-07 6.233768568543496 0.10813985150745131 DSDSGVGS(ph)DNGDKR ddPTM_A549_MK2206_60min_R1 2 DSDSGVGSDNGDKR 14 1 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3;C9J5B8 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 DS(0.001)DS(0.033)GVGS(0.967)DNGDKR;DS(0.003)DS(0.025)GVGS(0.972)DNGDKR 66.335 0.0017832 26554000.0 1232.9499999999998 1115.71 1045.31 1122.3799999999999 1439.36 997.28 1075.53 1054.0 1347.49 1688.3400000000001 1743.73 True False 1441.0418172666236 1172.4948734172863 1193.55067620867 1397.3631503855531 1227.632050708663 1102.8115076591127 1270.939879114182 1203.4077277396239 1042.2856664993642 1306.9428213969454 1310.7137165002594 1.0994329265999854 0.8945468859118743 0.9106112655901498 1.0661085886219737 0.9366134154654053 0.8413824420818095 0.9696548247833421 0.9181316351467248 0.7952046685544532 0.9971230215600531 1.0 10.356136894029868 -6.994395383315923 24.89892812181482 0.9033394590511954 0.9824987012114371 0.12859427688123815 0.08082220070919427 226.52116101795306 1006324.3174153654 0.013162200698037812 0.024819462659661597 1.0129887370850765e-07 6.994395383315923 0.07915924216024173 DSDSGVGS(ph)DNGDKR ddPTM_A549_PD325901_60min_R1 4 DSDSGVGSDNGDKR 14 1 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3;C9J5B8 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 DS(0.003)DS(0.028)GVGS(0.969)DNGDKR;DS(0.001)DS(0.015)GVGS(0.984)DNGDKR;DS(0.015)DS(0.122)GVGS(0.863)DNGDKR;DS(0.001)DS(0.017)GVGS(0.982)DNGDKR 59.185 0.0045187 38958210.0 2133.17 1801.31 2137.61 1957.66 2076.9300000000003 1835.92 2593.62 2361.3799999999997 2229.77 2123.32 2243.48 True False 2349.727848043244 1953.1127153979953 2282.68106909316 2078.580212031557 1931.0536018195273 1820.9688762173364 2692.3216283833226 2314.2804234332257 2136.060521134047 1989.253212831941 1967.5461825914665 1.1942427927909698 0.9926642295254993 1.1601664496060915 1.0564327436999963 0.9814527450004378 0.9255024823960817 1.368365150563963 1.1762267355702287 1.0856469545841254 1.0110325391254014 1.0 10.942181783985056 -10.148707762350103 1.0889064100269743 1.009936428247362 1.1002812765366798 0.09453939380190013 0.11632112962515734 0.8624514046200971 2.0428102625647964 0.0433885659602399 0.021664373916621286 7.100554049859756e-11 10.148707762350103 0.09034484828931788 DSDT(ph)DVEEEELPVENR ddPTM_A549_PD325901_60min_R1 1 DSDTDVEEEELPVENR 16 0 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 DS(0.014)DT(0.986)DVEEEELPVENR 82.90799999999999 0.00019191 1578800.0 133.21 245.74 0.0 163.25 0.0 0.0 0.0 0.0 208.23 0.0 139.77 True False 146.73338113598103 266.44937222460504 0.0 173.33358173234973 0.0 0.0 0.0 0.0 199.47881723933074 0.0 122.57917607503046 1.197049823912716 2.1736919822459235 0.0 1.414054061076839 0.0 0.0 0.0 0.0 1.627346696450547 0.0 1.0 6.937570102531164 -8.775454512886693 24.9660694178647 1.2962470415866914 0.5980710594000469 0.0 0.8075370700509545 318.1220767076044 566689.5659316719 0.12921902700904797 0.1378956696952422 1.6770479771158117e-09 8.775454512886693 -0.6981759821866445 DSEAWVPDS(ph)EER ddPTM_A549_MK2206_60min_R1 2 DSEAWVPDSEER 12 0 Q96F63;M0QXS4 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 DSEAWVPDS(1)EER;DSEAWVPDS(1)EER 111.12 7.1281e-05 2336700.0 998.6700000000001 1004.8799999999999 571.64 867.62 1219.73 838.99 1010.05 781.11 1533.8000000000002 1376.82 1333.8400000000001 True False 1167.2210808626944 1056.0240998104907 652.7071476862595 1080.1869389489414 1040.3093327665608 927.7713649235112 1193.5630107010306 891.8347345490492 1186.3967489752977 1065.7954057569816 1002.6107158887596 1.1641817331146482 1.0532742998606224 0.6510075519267419 1.0773742209521615 1.0376004527783083 0.9253555245528097 1.1904550707330135 0.8895124702098226 1.1833074693637418 1.063020162129638 1.0 9.969545843481013 -7.737678421894449 24.981093180437817 1.077930706231513 0.979347185483163 0.0678958605678942 0.1442588529856993 447.5440468137859 470524.65282434266 0.022356281503656924 0.0331495298633268 1.8294543542506017e-08 7.737678421894449 -0.09858352074835008 DSEAWVPDS(ph)EER ddPTM_A549_PD325901_60min_R1 2 DSEAWVPDSEER 12 0 Q96F63;M0QXS4 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 DSEAWVPDS(1)EER;DSEAWVPDS(1)EER 134.08 4.6456e-08 3371500.0 1750.0700000000002 1475.7600000000002 1248.78 1394.3600000000001 1357.27 1645.3 1428.29 1007.14 1677.37 1639.04 1782.29 True False 1927.7358180665583 1600.1274743801712 1333.5297203241735 1480.4864503786775 1261.940037527306 1631.9012222974768 1482.6443575402782 987.0518026139545 1606.8759721113015 1535.5507346796828 1563.0796288671822 1.233293417983865 1.023701828639299 0.8531425371403685 0.9471599674366156 0.80734213038262 1.0440294865081006 0.9485405158883695 0.6314788986977617 1.0280192655801292 0.982388041095865 1.0 10.610175560917478 -4.126918763591453 15.813450336712878 0.9739100674440557 0.9612080111533667 0.0 0.14749545516851953 0.0 0.0 0.018845582473742368 0.0 7.465883975041306e-05 4.126918763591453 -0.01270205629068899 DSEEEFGS(ph)ERDEYR ddPTM_A549_MK2206_60min_R1 3 DSEEEFGSERDEYR 14 1 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 DSEEEFGS(0.997)ERDEY(0.003)R;DS(0.004)EEEFGS(0.992)ERDEY(0.004)R;DS(0.066)EEEFGS(0.934)ERDEYR 61.641000000000005 0.0053577 18049360.0 0.0 152.5 0.0 256.65 152.85 0.0 278.01 301.98 553.85 420.63 458.30999999999995 True False 0.0 160.261598619835 0.0 319.5292615214564 130.36596747917062 0.0 328.52081838027175 344.7865897749638 428.4038593167096 325.60939085977776 344.4989782874836 0.0 0.46520195623366134 0.0 0.9275187494309779 0.3784219277723968 0.0 0.9536191370243248 1.0008348689128481 1.2435562550760528 0.9451679435404812 1.0 8.428355893976377 -7.888882310246587 5.766263403719077 1.1035920863353301 0.32396204939191986 0.6529950722972845 0.26490795394628286 0.09181173260688372 4.359839532865475 0.04012036462773701 0.055737163448887066 1.2915692294071761e-08 7.888882310246587 -0.7796300369434103 DSEEEFGS(ph)ERDEYR ddPTM_A549_PD325901_60min_R1 4 DSEEEFGSERDEYR 14 1 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 DSEEEFGS(1)ERDEYR;DS(0.007)EEEFGS(0.993)ERDEYR;DSEEEFGS(1)ERDEYR;DS(0.033)EEEFGS(0.965)ERDEY(0.002)R 141.97 1.7092e-13 24277500.0 952.3499999999999 665.8399999999999 796.73 1022.98 1182.6799999999998 1015.28 1040.5900000000001 796.48 1623.93 1247.1699999999998 748.63 True False 1049.0318709169849 721.9526735656831 850.8008889266958 1086.1671512438538 1099.6126368245039 1007.0118962950108 1080.190221882697 780.5935815735279 1555.6818694686963 1168.4234733566357 656.553255956572 1.5977864116880924 1.09961022508955 1.2958596750649158 1.6543473684573409 1.6748262640513631 1.533785549243579 1.6452438733380474 1.1889265257488275 2.369467907370484 1.7796324407138748 1.0 9.35876822905475 -6.258788986428361 22.08831853382888 1.6211534564268546 1.3079378308737923 0.11046915507161092 0.34344464493761245 101.69192316717304 847449.0048343398 0.0682504460734269 0.17166191289146127 5.510753860605497e-07 6.258788986428361 -0.31321562555306226 DSEEEFGS(ph)ERDEYREK ddPTM_A549_MK2206_60min_R1 3 DSEEEFGSERDEYREK 16 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 DS(0.002)EEEFGS(0.997)ERDEY(0.001)REK;DSEEEFGS(1)ERDEYREK;DSEEEFGS(1)ERDEYREK 134.29 5.8561e-11 41795000.0 2367.05 2372.0 2622.3500000000004 2583.87 3331.98 2750.6 2819.65 2215.78 4306.6900000000005 4389.110000000001 3672.88 True False 2766.550171183715 2492.724668368844 2994.238661981426 3216.9182659943335 2841.8501558472153 3041.6666662994908 3331.943906859224 2529.873600541655 3331.2315913707307 3397.6070026307198 2760.8025296688556 1.0020818734600148 0.9028985744474212 1.0845537229859645 1.165211286002475 1.0293565458982976 1.1017327873371383 1.2068751281747319 0.9163544199030782 1.2066171178748866 1.230659189173608 1.0 11.430871985461744 -5.801724546762163 9.947235148965584 1.0942393937853956 0.9526095945611414 0.2719805957723317 0.09475447711682282 0.35937131505392067 86.35471869531904 0.012885427000886442 0.04040055540349239 1.5786121941636707e-06 5.801724546762163 -0.14162979922425423 DSEEEFGS(ph)ERDEYREK ddPTM_A549_PD325901_60min_R1 3 DSEEEFGSERDEYREK 16 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 DSEEEFGS(1)ERDEYREK;DSEEEFGS(1)ERDEYREK;DSEEEFGS(1)ERDEYREK 171.35 1.0886e-28 66275900.0 3139.09 2559.5299999999997 3293.96 2936.39 3754.24 3876.85 3264.7 3740.85 4629.96 3484.5299999999997 3853.8599999999997 True False 3457.76810592408 2775.230575771317 3517.507933790591 3117.7641412744506 3490.5551338248933 3845.278218965519 3388.9399450123865 3666.2358121099455 4435.378882319609 3264.5161811263893 3379.85965163137 1.0230507956906156 0.8211082298733279 1.040726034908811 0.9224537296303376 1.0327515026075398 1.1377035188752598 1.0026865888873917 1.0847301929653645 1.3122967636182075 0.965873295818864 1.0 11.72274762463128 -7.169946308294877 0.9879229090890972 1.1408449707686947 0.9377292056547959 0.1510312947942185 0.10951597504816685 0.5015365605499913 0.9604060072061191 0.021543598116203915 0.052580509907130306 6.761665645077566e-08 7.169946308294877 -0.20311576511389884 DSEGDSLGARPGLPYGLS(ph)DDESGGGR ddPTM_A549_MK2206_60min_R1 1 DSEGDSLGARPGLPYGLSDDESGGGR 26 1 Q8N8E2;Q8N8E2-2;C9JT52 Q8N8E2 ZNF513 Zinc finger protein 513 1 DSEGDSLGARPGLPY(0.003)GLS(0.995)DDES(0.002)GGGR 65.587 9.3441e-05 12660000.0 889.31 682.17 732.53 614.63 863.45 766.7 864.9 395.73 1241.7 1084.8 1289.4 True False 1039.4037864579914 716.8895392163465 836.4137689710583 765.2143775917891 736.4376488052985 847.8316851057292 1022.0411345530626 451.82593937229774 960.4569325874485 839.7429265736799 969.2063943703632 1.0724277021853856 0.7396665389130741 0.8629882900374667 0.7895267530595526 0.7598357306378679 0.8747689759687521 1.0545134044612068 0.4661813438259687 0.9909725504972563 0.8664232215669727 1.0 9.920660112822322 -8.939730987536114 24.9999586241882 0.9960236683431138 0.8249431732460606 0.09312705219329098 0.1584494990973989 76.20808575780372 31611.37378337021 0.02434171043728754 0.0259133373580965 1.1488650358189467e-09 8.939730987536114 -0.17108049509705325 DSEGDSLGARPGLPYGLS(ph)DDESGGGR ddPTM_A549_PD325901_60min_R1 2 DSEGDSLGARPGLPYGLSDDESGGGR 26 1 Q8N8E2;Q8N8E2-2;C9JT52 Q8N8E2 ZNF513 Zinc finger protein 513 1 DSEGDSLGARPGLPYGLS(0.964)DDES(0.036)GGGR;DSEGDSLGARPGLPYGLS(0.998)DDES(0.002)GGGR 136.48 1.0185999999999999e-24 42177000.0 3950.6000000000004 4339.5 4305.0 5310.6 4300.9 5602.6 4909.4 4234.1 5433.8 5123.2 5932.5 True False 4351.662003721991 4705.204894476577 4597.163188068012 5638.6237007523205 3998.819621299513 5556.97428313611 5096.229903526759 4149.647553912808 5205.436282548509 4799.720277669219 5202.840109215986 0.8364012563087858 0.9043531601407606 0.883587250725788 1.0837587898894712 0.7685839920808356 1.068065550062327 0.9795092289112663 0.7975735303805285 1.0004989915657652 0.9225192734958921 1.0 12.345083656557586 -2.000000000013644 0.1589077702896035 1.0171278461453093 0.4388907851289283 0.03280564272507702 0.09844682434037737 77.21624327370942 0.7510530004522114 0.13518381591357528 10.53203453644452 0.009999999999685831 2.000000000013644 -0.578237061016381 DSEGFNS(ph)PK ddPTM_A549_MK2206_60min_R1 1 DSEGFNSPK 9 0 O43303-2;O43303;I3L262 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 DSEGFNS(1)PK 111.86 0.00030303 8846600.0 3170.8 3401.4 2886.3 2794.2 5298.7 3283.6 3391.1 3622.0 5288.7 4453.0 4362.4 True False 3705.953521382869 3574.5167314459472 3295.6207409678304 3478.7791254364033 4519.268249145445 3631.0683725227227 4007.218974890612 4135.429591909791 4090.817894318464 3447.0642072571873 3279.0956838849656 1.1301754747797343 1.0900922315298152 1.005039516585038 1.060895887403584 1.3782056654690733 1.1073383403746093 1.2220500287881169 1.2611494114774562 1.2475445332146564 1.0512240384437999 1.0 11.679082284792656 DSENLAS(ph)PSEYPENGER ddPTM_A549_MK2206_60min_R1 3 DSENLASPSEYPENGER 17 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 DSENLAS(0.999)PS(0.001)EYPENGER;DSENLAS(0.999)PS(0.001)EYPENGER;DSENLAS(0.992)PS(0.008)EYPENGER 436.08 0.0 865813000.0 36769.32 39614.75 35771.59 31210.44 45287.5 37927.74 35277.23 32828.21 50145.7 53957.6 48216.5 True False 42975.0822924352 41630.97156672206 40844.539355367604 38856.99920108988 38625.76874198847 41941.22827240381 41686.64605513857 37481.70929967668 38787.77901622805 41768.54068481929 36243.012342297676 1.185748079838298 1.1486620144467496 1.126963150016636 1.0721238851258932 1.0657438840123667 1.1572224702596254 1.1501981585147618 1.0341775387122933 1.0702139946287104 1.1524577562796292 1.0 15.14541524968759 -9.295088370997693 0.018010878092425832 1.0138266175932532e-07 2.122576606654923 0.0 0.058108834516928456 183.91527251846418 1.8113967891900198 109.56739153601437 103.56567801113118 5.068875554174544e-10 9.295088370997693 2.1225765052722614 DSENLAS(ph)PSEYPENGER ddPTM_A549_PD325901_60min_R1 4 DSENLASPSEYPENGER 17 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 DSENLAS(0.991)PS(0.009)EYPENGER;DSENLAS(0.998)PS(0.002)EYPENGER;DSENLAS(1)PSEYPENGER;DSENLAS(0.999)PS(0.001)EYPENGER 452.39 0.0 824303000.0 29217.71 32263.25 32195.440000000002 31126.9 35938.15 34343.8 32423.510000000002 39206.55 43522.71 51150.85 53124.82 True False 32183.870410258714 34982.187305385705 34380.41616530832 33049.53791868103 33413.97832388691 34064.1154794506 33657.40441587548 38424.54460330652 41693.60185300097 47921.1766015413 46590.80392598052 0.6907773143685112 0.7508388857372457 0.7379227930887172 0.7093575369763377 0.7171796901588601 0.7311338849951752 0.7224044570973164 0.8247237945143024 0.8948890841042406 1.0285544048064583 1.0 15.507757603964889 -8.831117735438049 0.8156007247730973 0.9756331124127804 0.7164312849227249 0.9418492137828088 0.02777076060876041 0.08209301330953421 0.112784941199909 0.006875335244047666 0.006814877967137425 1.4753065295595327e-09 8.831117735438049 -0.2592018274900555 DSENT(ph)PVK ddPTM_A549_MK2206_60min_R1 2 DSENTPVK 8 0 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DSENT(1)PVK;DSENT(1)PVK 116.55 0.0013591 24879000.0 9011.0 8707.5 6782.4 5375.7 6052.5 4066.5 4659.5 5055.8 4958.7 11009.7 13307.3 True False 10531.836502201666 9150.674557260421 7744.246306184462 6692.746741324342 5162.185267698269 4496.814330875765 5506.070836455079 5772.475132738137 3835.5623674167496 8522.60112343127 10002.730147203925 1.052896194060143 0.9148176970282779 0.7742132590020155 0.6690920021665459 0.5160776299799771 0.4495586969456299 0.5504568008359395 0.577089959219956 0.3834515488242886 0.8520274962944594 1.0 13.288106202775326 -5.739060507825028 1.7044184389111572 0.6481150909064055 1.0537379980394381 0.4108882642993532 0.1675742280975477 0.5161397921346471 2.538263294248081 0.03415884064522711 0.25298172486196746 1.8236416068174814e-06 5.739060507825028 0.4056229071330326 DSENT(ph)PVK ddPTM_A549_PD325901_60min_R1 2 DSENTPVK 8 0 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DSENT(1)PVK;DS(0.001)ENT(0.999)PVK 136.49 0.0011503 44642000.0 17243.9 16447.8 13487.5 13414.6 17447.8 13868.7 10846.0 13182.3 14527.3 15047.7 20257.9 True False 18994.48803371177 17833.913829559115 14402.842856926194 14243.189375232945 16222.326719642333 13755.757905352835 11258.750465158926 12919.3686851857 13916.768101046579 14097.585653943457 17766.306725408587 1.0691298043699027 1.0038053550012078 0.8106830012299565 0.8016966944999866 0.9130950495435204 0.7742609715096249 0.6337136152815125 0.727183701422254 0.783323642676023 0.7935011970598095 1.0 14.116856183441545 -5.642399075355987 4.478414790480409 0.8489836546204202 1.0542204659847665 0.4048016143279233 0.09789932314609436 0.2106116037237655 7.028640792978424 0.017278252894591183 0.07378052259491182 2.2782476167970334e-06 5.642399075355987 0.20523681136434624 DSENT(ph)PVKGGTVADLDEQDEETVTAGGKEDEDPAK ddPTM_A549_MK2206_60min_R1 1 DSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAK 35 2 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DS(0.036)ENT(0.964)PVKGGTVADLDEQDEETVTAGGKEDEDPAK 115.37 3.9768000000000004e-21 28447000.0 778.76 1062.5 1023.6 1056.4 1321.0 989.15 1237.7 1178.0 1341.8 1586.4 1382.2 True False 910.1956491459961 1116.5767116955717 1168.761871757846 1315.2180474235977 1126.682649918119 1093.8211964553705 1462.5740689517006 1344.9851074736973 1037.8844424143006 1228.0311381973495 1038.9615932206589 0.8760628449454965 1.074704511679123 1.1249327014435841 1.26589669532112 1.0844314720292356 1.0528023399446877 1.4077267903791255 1.2945474753348691 0.998963242901964 1.1819793399586573 1.0 10.020926608495913 -8.822789187777476 23.88898646860625 0.999509933158794 1.151793681369634 0.023047756689885457 0.14435569561276754 52.709634004864185 20524.009242151253 0.023640095180177078 0.02516679867134887 1.503871787981187e-09 8.822789187777476 0.1522837482108399 DSENT(ph)PVKGGTVADLDEQDEETVTAGGKEDEDPAK ddPTM_A549_PD325901_60min_R1 2 DSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAK 35 2 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DS(0.026)ENT(0.973)PVKGGT(0.001)VADLDEQDEETVTAGGKEDEDPAK;DS(0.012)ENT(0.877)PVKGGT(0.111)VADLDEQDEETVTAGGKEDEDPAK 175.57 1.4012e-63 75683000.0 6841.6 7095.299999999999 5927.2 5729.1 7533.599999999999 6719.6 7786.700000000001 7588.5 6451.700000000001 6207.0 6508.5 True False 7536.154195480277 7693.245831957518 6329.455435149058 6082.97349526986 7004.465925509081 6664.877805476276 8083.027129545731 7437.141414436918 6180.55748539111 5815.088960706757 5707.995760780822 1.3202802719757754 1.3478016022396493 1.1088752866002871 1.0656934150276494 1.2271322928507062 1.1676388849603065 1.4160884955597828 1.3029339414610144 1.082789431600006 1.0187619620641213 1.0 12.478768548014173 -8.908834757432865 4.369304002739304 1.0351237561580324 1.239726358179167 0.4759964722982639 0.0991767253474912 0.15071146299440966 5.01863631725908 0.019127257260423577 0.020077532355928056 1.2335741004788623e-09 8.908834757432865 0.20460260202113467 DSENTPVKGGT(ph)VADLDEQDEETVTAGGKEDEDPAKGDQSR ddPTM_A549_PD325901_60min_R1 1 DSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSR 40 3 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DS(0.024)ENT(0.394)PVKGGT(0.582)VADLDEQDEETVTAGGKEDEDPAKGDQSR 123.64 7.4237e-22 10288000.0 1264.7 847.73 1000.1 856.55 1171.2 1353.8 973.63 1288.5 1353.0 1250.8 1514.3 True False 1393.0914129770683 919.1711822086942 1067.9728000898524 909.4571481338077 1088.938952420655 1342.7751016509599 1010.6820224407792 1262.7998566913036 1296.1381151842404 1171.8242745371363 1328.0506999386037 1.0489745708062739 0.6921205510084727 0.8041656844420362 0.6848060455642636 0.8199528470343768 1.0110872286073394 0.7610266855681815 0.9508672046554272 0.9759703565866585 0.8823641104901419 1.0 10.37509450902297 -8.195446380472413 0.7973575199519153 0.9953243416811767 0.8060243261640163 0.15894139256003115 0.114367636212191 0.4589598288434559 0.5847797559315399 0.02237557139208948 0.03140885341128483 6.376077974816922e-09 8.195446380472413 -0.18930001551716036 DSES(ph)PSQK ddPTM_A549_MK2206_60min_R1 2 DSESPSQK 8 0 E7ETY2;Q13428-6;Q13428-7;H0YA99;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 DS(0.01)ES(0.707)PS(0.283)QK;DSES(0.982)PS(0.018)QK 185.33 1.3489000000000002e-09 40275000.0 14968.1 10528.900000000001 6915.79 5015.39 720.1 635.4 684.1700000000001 815.06 1167.3700000000001 13001.3 13225.6 True False 17494.349345089853 11064.776037432013 7896.553013954865 6244.16077514941 614.1742439107015 702.637606255616 808.4748329600756 930.5972510165635 902.9625589068287 10064.297300204997 9941.31851200922 1.7597614767051766 1.1130089056160553 0.7943164686269475 0.6281018727653074 0.061779958379642744 0.07067851265471699 0.0813247087882185 0.09360903685888265 0.09082925547713215 1.0123704705816654 1.0 13.279221493047924 -5.486295648686107 1.2425803399964799 0.4237790014018696 2.0352940261748804 0.6038113041559001 0.3463390692111355 0.6569841094132924 1.118642276373519 0.062336506333831185 1.2117668886092947 3.263655811199766e-06 5.486295648686107 1.6115150247730108 DSES(ph)PSQK ddPTM_A549_PD325901_60min_R1 2 DSESPSQK 8 0 E7ETY2;Q13428-6;Q13428-7;H0YA99;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 DSES(0.997)PS(0.003)QK;DSES(0.939)PS(0.061)QK 148.91 0.00070658 103649000.0 7972.200000000001 7149.9 6027.799999999999 5163.6 7593.8 4117.6 3845.0 4277.4 6616.0 7010.3 8338.1 True False 8781.531875176552 7752.447165576228 6436.8827561060025 5482.543844613547 7060.437685187811 4084.0676307859285 3991.323579064732 4192.083901444615 6337.952527759752 6567.6684616147195 7312.566559570802 1.2008823172601615 1.060154065254928 0.8802494587459596 0.7497427613069596 0.9655211515233321 0.5584998915928685 0.5458170597901533 0.5732712129584584 0.8667206617715555 0.8981345206381542 1.0 12.836162135831913 -5.611150963344944 2.4297168377788108 0.8457023286778368 1.1951916077126068 0.3669566851520324 0.16455667655215758 0.3496641788855727 3.722176794489696 0.02762452394888135 0.18551618476730106 2.4482120808385795e-06 5.611150963344944 0.34948927903477 DSES(ph)PSQKK ddPTM_A549_MK2206_60min_R1 1 DSESPSQKK 9 1 E7ETY2;Q13428-6;Q13428-7;H0YA99;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 DS(0.073)ES(0.854)PS(0.073)QKK 43.628 0.0275 8033900.0 5162.3 3306.3 2760.0 2105.7 1180.5 1040.2 727.59 674.25 1591.0 4881.1 5575.6 True False 6033.570033882546 3474.5765476508896 3151.4095018089656 2621.5965945284647 1006.8500137988942 1150.2732735711222 859.7836849224914 769.8270023040246 1230.6410403049279 3778.456119928824 4191.024641268342 1.4396407920084644 0.8290518059563039 0.7519424893801735 0.6255264091539876 0.24023958339080256 0.2744611096400072 0.20514880214645853 0.18368467575295613 0.29363727146507435 0.901559032300354 1.0 12.033087288528884 -5.053168913949839 1.173623991548719 0.5352000825481765 2.2035194233117483 0.513779407826536 0.273211289592381 1.966372288376768 1.6120260572782181 0.05138677541219692 4.485647958297879 8.8477142101675e-06 5.053168913949839 1.668319340763572 DSESPS(ph)QKK ddPTM_A549_PD325901_60min_R1 2 DSESPSQKK 9 1 E7ETY2;Q13428-6;Q13428-7;H0YA99;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 DS(0.006)ES(0.372)PS(0.622)QKK;DS(0.005)ES(0.368)PS(0.627)QKK 63.473 0.002807 34731000.0 16329.1 15044.8 14959.599999999999 12510.9 15911.8 10619.8 9397.6 10151.7 14226.4 17525.8 21878.2 True False 17986.818211151927 16312.67809573019 15974.848415382614 13283.669878684552 14794.210060729989 10533.315869783462 9755.230810564042 9949.21637964541 13628.513881638652 16419.217997028267 19187.32009733656 0.9374325398182481 0.8501801196298693 0.8325731959618541 0.6923150190488817 0.7710409784002932 0.5489727495214727 0.5084207049799617 0.5185307968582067 0.7102875134464692 0.8557327398372564 1.0 14.227865603210265 -10.42995277801216 0.9693090656866421 0.9857329197502359 0.7049700929003406 0.2548423244086033 0.13853425117223028 0.4423276691044023 0.7950675671255955 0.07575979484167035 0.02723930476510397 3.715756293018113e-11 10.42995277801216 -0.2807628268498953 DSET(ph)VDEDEEVDPALTVGTIKK ddPTM_A549_PD325901_60min_R1 1 DSETVDEDEEVDPALTVGTIKK 22 1 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 DS(0.154)ET(0.846)VDEDEEVDPALTVGTIKK 140.55 6.183999999999999e-25 4365500.0 2064.1 2108.1 1395.9 1668.4 2349.7 1997.6 2119.4 1837.4 1971.5 2694.4 2549.2 True False 2273.6459124898906 2285.7569853775935 1490.6341682286022 1771.4532787886815 2184.665178024942 1981.33220790217 2200.0549267801803 1800.751615587584 1888.6447110759282 2524.275124170819 2235.66456071022 1.016988841907305 1.0224060556971304 0.6667521570208464 0.792360942656769 0.9771882671570924 0.8862385899576749 0.9840720139524297 0.8054659215135235 0.8447800015562033 1.1290938580557512 1.0 11.126488027001056 -10.881936568578032 1.140572564668653 0.9997739566065658 0.8830264548330595 0.22726375968156698 0.11173747542570447 0.7974666816683174 1.848158050089027 0.07293560352789732 0.017701828358611806 1.3123915680081947e-11 10.881936568578032 -0.11674750177350623 DSFDDRGPSLNPVLDYDHGS(ph)R ddPTM_A549_MK2206_60min_R1 4 DSFDDRGPSLNPVLDYDHGSR 21 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 DSFDDRGPSLNPVLDYDHGS(1)R;DSFDDRGPSLNPVLDYDHGS(1)R;DSFDDRGPSLNPVLDYDHGS(1)R;DSFDDRGPSLNPVLDYDHGS(1)R 112.8 2.4664e-11 26196600.0 3797.3199999999997 4624.18 4464.47 3848.57 6464.63 5036.67 4369.23 4378.34 7652.0199999999995 6204.4 7345.219999999999 True False 4438.214780439508 4859.531010530285 5097.59897773227 4791.469822768872 5513.691490643577 5569.647076329042 5163.062534770814 4998.983103103897 5918.849687765001 4802.821730857059 5521.19915624095 0.8038497896643922 0.8801586164551335 0.9232775043026914 0.867831369088141 0.9986402110510926 1.0087748908737204 0.9351342686008143 0.9054161897879085 1.0720224937139902 0.8698874275216345 1.0 12.430765926461945 -5.110297850786499 0.32840277005039276 1.0315358770529026 0.6310956036063731 0.18448676329536462 0.06803156099773394 3.6941922610322315 0.2552568961087196 0.018008603589762643 0.5990193349163065 7.75714928082927e-06 5.110297850786499 -0.40044027344652955 DSFDDRGPSLNPVLDYDHGS(ph)R ddPTM_A549_PD325901_60min_R1 1 DSFDDRGPSLNPVLDYDHGSR 21 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 DSFDDRGPSLNPVLDYDHGS(1)R 81.15100000000001 1.126e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DSGFSSGNTDT(ph)SSER ddPTM_A549_MK2206_60min_R1 1 DSGFSSGNTDTSSER 15 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSS(0.001)GNT(0.066)DT(0.398)S(0.267)S(0.267)ER 86.291 7.2798e-05 4104700.0 673.65 485.47 462.82 332.15 806.81 611.86 573.84 533.73 941.77 784.71 624.72 True False 787.3456508387692 510.1783493899757 528.4548353721831 413.5267649107799 688.1293177747441 676.6066190802032 678.099300094727 609.3878619795727 728.4605986976572 607.4434659952362 469.5847826051291 1.6766847649337975 1.0864456606954862 1.1253661850804852 0.8806221586156295 1.4653995258474715 1.440861467713185 1.4440401929824385 1.2977163753025684 1.5512866380727999 1.29357570453051 1.0 8.875241846911289 -5.244548703587371 23.333478130452328 1.2624768809367095 1.6766856023254686 0.2582638936809125 0.20362118429313675 1751.6550146166974 2419709.4903593 0.03384985996865663 1.202594651423131 5.694443606908171e-06 5.244548703587371 0.4142087213887591 DSGFSSGNTDT(ph)SSERGR ddPTM_A549_MK2206_60min_R1 2 DSGFSSGNTDTSSERGR 17 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSSGNT(0.002)DT(0.389)S(0.345)S(0.264)ERGR;DSGFSSGNT(0.001)DT(0.333)S(0.333)S(0.333)ERGR 63.184 0.0011806 16827300.0 2372.8 2955.3999999999996 2111.82 2068.33 2938.5 1899.12 1803.04 1615.96 3008.7 3692.2 3696.2 True False 2773.270630609712 3105.8172364659717 2411.3078311993495 2575.0709428508617 2506.250542607413 2100.083617866171 2130.6290290722095 1845.0272786699468 2327.2342539066235 2858.129455655732 2778.3315300695967 0.9981784393240651 1.1178713565505163 0.8678978030886568 0.9268407729535275 0.9020703668667763 0.7558794172463515 0.7668735735863882 0.6640774359364267 0.8376373477100217 1.0287215275507946 1.0 11.44000304677812 -5.771138035204585 24.988186074562744 0.8790688553515048 1.0580249000472006 0.33019714037793446 0.10566705838878637 177.2150234541564 456591.89239658654 0.016195983298203237 0.05126923168882166 1.6937993614136205e-06 5.771138035204585 0.17895604469569582 DSGFSSGNTDT(ph)SSERGR ddPTM_A549_PD325901_60min_R1 1 DSGFSSGNTDTSSERGR 17 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSSGNTDT(0.333)S(0.333)S(0.333)ERGR 75.358 0.00019054 17811000.0 2415.9 2583.8 1862.5 1796.1 2287.0 2079.4 2134.6 2197.9 2052.1 2405.7 2735.6 True False 2661.1603895084204 2801.5458938468905 1988.9004501223374 1907.0410177609394 2126.3690097216827 2062.4660558228734 2215.833371097939 2154.0611602808062 1965.8573733699775 2253.8036914406707 2399.1385423971747 1.1092149713244315 1.167729934865553 0.8290060848820614 0.7948857408857513 0.88630521837103 0.8596694269110844 0.9235954205812222 0.8978477575240438 0.8194013553738874 0.9394220682181663 1.0 11.228300755614901 -5.756197402187356 24.999978310190983 0.8947576125909277 1.1384725462242162 0.7405580108925813 0.057920739295351874 62.04572205337405 295897.6410758383 0.010427332558763774 0.03808809310668222 1.7530834823326705e-06 5.756197402187356 0.24371493363328856 DSGFSSGNTDTS(ph)SER ddPTM_A549_PD325901_60min_R1 1 DSGFSSGNTDTSSER 15 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSSGNT(0.015)DT(0.077)S(0.454)S(0.454)ER 160.78 1.1155999999999998e-19 6193200.0 841.34 1056.4 1129.7 843.37 982.17 955.07 1060.8 1046.9 1217.8 1228.7 1112.0 True False 926.7522174382273 1145.426535436122 1206.3682354379623 895.4630494677594 913.1857675025559 947.2922265724493 1101.1693244920339 1026.0187582228384 1166.6201010135758 1151.1196723087457 975.2310495487856 0.9502899009081097 1.1745181164669456 1.2370076157810173 0.9182060496146706 0.9363788898282757 0.9713515858736627 1.129136859415537 1.0520776165787082 1.1962499569238911 1.1803558478181548 1.0 9.929600249199781 -7.783090673895211 24.975307284527734 1.093823183509795 1.0376984720110756 0.11208041697692528 0.10651577582736317 643.2304246455724 741979.1576142563 0.018646662743649775 0.025776535366999354 1.6478183169162934e-08 7.783090673895211 -0.05612471149871934 DSGFSSGNTDTS(ph)SERGR ddPTM_A549_PD325901_60min_R1 1 DSGFSSGNTDTSSERGR 17 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSSGNTDT(0.029)S(0.543)S(0.428)ERGR 78.708 4.187e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DSGFSSGNTDTSS(ph)ER ddPTM_A549_MK2206_60min_R1 1 DSGFSSGNTDTSSER 15 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSS(0.001)GNT(0.034)DT(0.052)S(0.298)S(0.614)ER 112.96 1.5179e-06 4525600.0 841.93 896.2 716.1 563.18 962.83 1014.7 771.38 753.06 1007.4 944.57 1125.0 True False 984.0272007877757 941.8127520203026 817.6537479150004 701.1591252821106 821.1989824531881 1122.0748804966531 911.5297610955508 859.8085611495269 779.2255084872313 731.1909809676446 845.6314515795401 1.1636596521448304 1.1137390292911966 0.9669150152678443 0.8291545022035638 0.9711074261952828 1.3269076953095218 1.0779279311252206 1.0167651162258755 0.921471767673411 0.8646686208298732 1.0 9.723885225665144 -8.53740310302874 5.5330057047170715 0.96297336018393 1.059220747090542 0.1719777352739127 0.12354073718365458 0.30489799569611853 29.9361252896971 0.02165814092256823 0.025012615881663956 2.901328452093178e-09 8.53740310302874 0.09624738690661194 DSGFSSGNTDTSS(ph)ER ddPTM_A549_PD325901_60min_R1 1 DSGFSSGNTDTSSER 15 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 DSGFSSGNTDT(0.006)S(0.018)S(0.976)ER 136.81 9.9226e-10 6937800.0 741.22 826.74 806.33 944.83 1151.0 1093.6 824.1 645.55 1179.2 939.76 762.82 True False 816.4681087426754 896.412281244282 861.0524026561857 1003.1900032353814 1070.157730734437 1084.6940841819242 855.4615764648236 632.6739988258215 1129.64232477846 880.4233932195547 668.9979759143934 1.220434348290394 1.3399327255348663 1.2870777396288686 1.4995411635800704 1.5996427033605511 1.621371249590633 1.2787207245217294 0.9457039058467646 1.6885586585437022 1.316032970079144 1.0 9.385858035704713 -11.093025785028342 1.4186558274280874 0.9996118950882258 1.4221762348315192 0.06200258258492253 0.2234876393820509 0.4029067707387284 1.4467416850084256 0.1608576951714205 0.03503408256458737 8.071871043342592e-12 11.093025785028342 0.42256433974329344 DSGGKT(ph)PGDFSYAYQKPEETTR ddPTM_A549_PD325901_60min_R1 3 DSGGKTPGDFSYAYQKPEETTR 22 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DS(0.423)GGKT(0.567)PGDFS(0.008)Y(0.001)AYQKPEETTR;DS(0.015)GGKT(0.984)PGDFS(0.001)YAYQKPEETTR;DS(0.187)GGKT(0.812)PGDFS(0.001)YAYQKPEETTR 136.63 1.3175000000000002e-22 108098100.0 16492.600000000002 17844.6 17477.8 16703.800000000003 20402.6 18379.6 16920.4 15572.7 16897.800000000003 17001.9 15964.6 True False 18166.916610789594 19348.427067629153 18663.948610549367 17735.555788917765 18969.591761148946 18229.922631336958 17564.315081198154 15262.090281953184 16187.644229682386 15928.397132437598 14001.055407937542 1.2975390841243528 1.38192632654393 1.3330386936379321 1.2667299194361479 1.3548687015690701 1.30203917491834 1.2544993623295364 1.0900671297465712 1.1561731425264707 1.1376568885947984 1.0 13.773247962034528 -8.652760156415681 0.3767379398826781 1.0010155991427019 1.3657724025521936 0.7486262684424365 0.058012345057312745 0.2600832205511301 0.10051807770268313 0.028918171217459633 0.029379227484884723 2.2245380754615226e-09 8.652760156415681 0.3647568034094917 DSGGKTPGDFSYAYQKPEET(ph)TRSPDEEDYDYESYEK ddPTM_A549_PD325901_60min_R1 1 DSGGKTPGDFSYAYQKPEETTRSPDEEDYDYESYEK 36 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DS(0.001)GGKT(0.001)PGDFS(0.017)Y(0.01)AY(0.047)QKPEET(0.306)T(0.306)RS(0.306)PDEEDY(0.007)DYESYEK 62.489 0.00039302 9056800.0 317.56 501.32 937.9 855.27 395.91 1301.5 860.65 647.61 715.09 687.58 689.69 True False 349.79845742468393 543.567995782693 1001.5515340508675 908.0980854408986 368.1026474153527 1290.90101551095 893.4025067157506 634.6929105097834 685.0372540924601 644.1660814568633 604.8625023051278 0.5783107005172313 0.8986637354955187 1.655833400539726 1.501329776569289 0.6085724375581483 2.1342057254191373 1.4770340421351933 1.0493176682154572 1.1325503754684523 1.0649793614283407 1.0 9.240463415158162 -8.304261994684293 23.37627481486458 1.0633464267468566 1.2830944961972666 0.047550707996667385 0.4324404845700576 559.3965822635928 305365.35348344786 0.07006235300311876 0.08470181912277022 4.962928350004115e-09 8.304261994684293 0.21974806945040992 DSGGKTPGDFSYAYQKPEETTRS(ph)PDEEDYDYESYEK ddPTM_A549_PD325901_60min_R1 2 DSGGKTPGDFSYAYQKPEETTRSPDEEDYDYESYEK 36 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DSGGKTPGDFSYAYQKPEET(0.127)T(0.127)RS(0.745)PDEEDYDYESYEK;DSGGKTPGDFSYAYQKPEET(0.339)T(0.091)RS(0.57)PDEEDYDYESYEK 180.69 9.401499999999999e-66 43075100.0 3000.7799999999997 2236.52 4190.7 3338.4900000000002 3323.8399999999997 7099.3 4647.7 5010.6 4417.4 4602.7 4527.5 True False 3305.416976542521 2424.999389467622 4475.106102726275 3544.7009450390938 3090.384945025501 7041.485654565417 4824.570766819027 4910.65965226034 4231.752039922298 4312.084736498305 3970.646202187165 0.8324632334962976 0.6107316708630075 1.127047305363353 0.8927264642935333 0.7783078087700721 1.7733853121153758 1.2150593432780519 1.2367406719730871 1.0657590287423007 1.085990671776061 1.0 11.955158102313804 -5.768173823555207 24.96947225715336 1.0858280626572199 0.7215974279079628 0.273800612811561 0.24828833530020053 145.66474606620147 540094.1940341096 0.03429261913996107 0.11020911350622989 1.705399677204946e-06 5.768173823555207 -0.3642306347492571 DSGIIT(ph)PEKELK ddPTM_A549_MK2206_60min_R1 1 DSGIITPEKELK 12 1 E5RI93;E7EVZ1;Q86UP3-2;Q86UP3-5 E5RI93 ZFHX4 1 DS(0.027)GIIT(0.973)PEKELK 46.964 0.014428 2404800.0 1230.3 1714.2 1040.3 1347.2 1280.2 1019.8 1091.2 1342.2 1664.8 1576.4 1772.8 True False 1437.944562052902 1801.445458059811 1187.8301828738643 1677.2640604781059 1091.884275870686 1127.714559111547 1289.4569152784156 1532.460960315108 1287.7254581393124 1220.290145142652 1332.564833209074 1.0790803765922992 1.3518632738653185 0.8913864100805806 1.2586735134221794 0.8193854802855762 0.8462736904108388 0.9676504160575465 1.1500085565252727 0.9663510742949897 0.9157454217097692 1.0 10.37999001072257 -6.046298939862731 1.412590797868803 0.9816688383136217 1.1979259583658504 0.21337947467633045 0.14432594240519567 0.5133788662138741 1.7951362306307037 0.01921756131999502 0.10294880693275345 8.988786393815704e-07 6.046298939862731 0.21625712005222864 DSGIIT(ph)PEKELK ddPTM_A549_PD325901_60min_R1 1 DSGIITPEKELK 12 1 E5RI93;E7EVZ1;Q86UP3-2;Q86UP3-5 E5RI93 ZFHX4 1 DS(0.036)GIIT(0.964)PEKELK 44.806999999999995 0.022292 5139600.0 2000.8 2052.0 2459.1 2205.4 2519.3 2310.0 1961.8 2006.8 2002.4 1992.4 2385.6 True False 2203.9197430888876 2224.9292414946253 2625.9893137695813 2341.6225491731952 2342.3530591131785 2291.1881258780586 2036.4573725381513 1966.7727996958558 1918.246091533574 1866.59952397489 2092.186323564373 1.0534050998546625 1.063446986740695 1.2551412291500832 1.1192227588907415 1.1195719199247065 1.0951166729618298 0.9733632944644821 0.940056235691831 0.9168619782704323 0.8921765250787224 1.0 11.030795623872354 -7.726467690638648 3.214891781346873 0.9577739956800402 1.125027048291313 0.7059978606781787 0.05560729411864196 0.1134084264989065 2.4210352206502948 0.00894914444212736 0.01328864716570469 1.8772940745737947e-08 7.726467690638648 0.16725305261127277 DSGNWDTSGSELS(ph)EGELEKR ddPTM_A549_MK2206_60min_R1 2 DSGNWDTSGSELSEGELEKR 20 1 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 DSGNWDTSGSELS(1)EGELEKR;DSGNWDTSGSELS(1)EGELEKR 151.47 7.198799999999999e-22 14365900.0 4008.2 3968.5 3186.3 2998.3 5313.9 4636.6 4220.3 4212.0 6259.0 6467.7 5917.700000000001 True False 4684.686168918512 4170.479699166001 3638.1652520340253 3732.883634598804 4532.232349280767 5127.241934474016 4987.07388155196 4809.0638987090115 4841.346493569171 5006.642077987266 4448.171769788665 1.053171147916593 0.9375716395421805 0.817901250294315 0.839195028382673 1.0188977817949902 1.15266275670771 1.1211513717665849 1.0811326872247768 1.0883901845812005 1.1255505266212178 1.0 12.118996784647406 -6.925222753825224 6.359264457036544 1.0605484750358278 0.908032303811008 0.5655987861870387 0.07142843429850404 0.1443565508233728 9.701493052218648 0.011094128418209155 0.021102774245124876 1.1878927894971889e-07 6.925222753825224 -0.15251617122481986 DSGPLPT(ph)PPGVSLLGEPPKDYR ddPTM_A549_MK2206_60min_R1 2 DSGPLPTPPGVSLLGEPPKDYR 22 1 A0A087WZ13;Q8IY67-2;E9PAU2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 DSGPLPT(0.999)PPGVSLLGEPPKDYR;DS(0.001)GPLPT(0.998)PPGVS(0.001)LLGEPPKDYR 138.54 7.749e-23 12448800.0 2344.2 2337.3 1945.95 1740.27 2671.3 2199.45 1642.53 1933.29 3440.1000000000004 2955.2 2751.3 True False 2739.8436498125784 2456.2585865845294 2221.9149710308534 2166.636228123689 2278.3553086497136 2432.1943391232503 1940.9564397473023 2207.339777952314 2660.922842710863 2287.6182675244627 2068.0762779829242 1.324827173437169 1.1877021233376432 1.074387339908939 1.0476577925050685 1.1016785661657909 1.1760660692338991 0.938532326109554 1.067339634157604 1.2866657149155858 1.1061575880342607 1.0 11.014073683002666 -5.380094097489063 2.8806693206257488 1.111972389700932 1.3370270177961916 0.3691706061328339 0.08811760743698653 0.37260740284275223 4.80779230437298 0.015984583126049296 0.16726999467995776 4.167790712175794e-06 5.380094097489063 0.22505462809525967 DSGPLPT(ph)PPGVSLLGEPPKDYR ddPTM_A549_PD325901_60min_R1 2 DSGPLPTPPGVSLLGEPPKDYR 22 1 A0A087WZ13;Q8IY67-2;E9PAU2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 DS(0.002)GPLPT(0.998)PPGVSLLGEPPKDYR;DS(0.003)GPLPT(0.997)PPGVSLLGEPPKDYR 128.4 4.6704e-22 14467800.0 4343.6 4208.2 5087.7 4900.3 6253.0 5705.3 5500.2 5824.4 5873.6 6432.9 6802.1 True False 4784.559074410686 4562.839782679183 5432.981916825463 5202.98040161123 5813.810851678922 5658.837928386187 5709.513120824925 5708.227772846592 5626.753017994206 6026.725596154415 5965.484822064565 0.8020402728566194 0.764873253185154 0.9107360221134866 0.8721806452959101 0.9745747454046574 0.9485964841375202 0.9570912157394355 0.9568757516126006 0.9432180595251051 1.0102658502898771 1.0 12.542423676893556 -5.977845579939055 0.8052641407843298 0.9707580337014974 0.7455418529620448 0.8139841915178883 0.03236206686838233 0.3304128876243577 0.27141569182692576 0.005021441621338463 0.05313772385476817 1.0523359815003655e-06 5.977845579939055 -0.2252161807394526 DSGREDEPGS(ph)PR ddPTM_A549_MK2206_60min_R1 4 DSGREDEPGSPR 12 1 Q2TAM9 Q2TAM9 TUSC1 Tumor suppressor candidate gene 1 protein 1 DS(0.138)GREDEPGS(0.862)PR;DSGREDEPGS(1)PR;DS(0.016)GREDEPGS(0.984)PR;DSGREDEPGS(1)PR 144.33 2.386e-12 136226600.0 2073.71 2068.67 1862.3899999999999 1664.08 2431.55 2257.57 1632.63 1820.0900000000001 2756.13 2778.85 2421.55 True False 2423.7015506581533 2173.9564669960273 2126.504906548551 2071.779674703391 2073.872216054807 2496.464558946318 1929.2577378949782 2078.0933312918532 2131.8709556352123 2151.1058550048583 1820.2123036199423 1.3315488230894954 1.194342254841689 1.1682730098678435 1.1382077082893818 1.1393573221818132 1.371523834874361 1.0599080854789147 1.1416763457532129 1.1712210445976328 1.1817884379348784 1.0 10.82989101613917 -14.999999997281504 0.1551587856718475 0.28114180470339395 1.247018333371161 0.0698792296396622 0.09694452318639046 38.62965824117776 0.3905040781208485 8.450790556186547 0.13541025815873833 1.0000000062595676e-15 14.999999997281504 0.9658765286677671 DSGREDEPGS(ph)PR ddPTM_A549_PD325901_60min_R1 3 DSGREDEPGSPR 12 1 Q2TAM9 Q2TAM9 TUSC1 Tumor suppressor candidate gene 1 protein 1 DS(0.003)GREDEPGS(0.997)PR;DSGREDEPGS(1)PR;DSGREDEPGS(1)PR 166.04 3.4997e-15 173232000.0 4419.7 4730.8 4631.3 5156.4 5005.56 4558.88 4957.299999999999 5051.200000000001 4669.83 4698.4 5203.8099999999995 True False 4868.384690388823 5129.481118744046 4945.607868269307 5474.89911696593 4653.986733844547 4521.753992771846 5145.952764238646 4950.449853410256 4473.573284871269 4401.742222166037 4563.7743596694845 1.0667452653687723 1.123955900202641 1.083666167191376 1.1996428143661404 1.0197670539920374 0.9907926282971007 1.127565115776522 1.0847271278698307 0.9802354218921664 0.9644960235248831 1.0 12.156011748893174 -8.756260766054613 23.569594062881613 0.9906667220209894 1.0878658867227453 0.43852431000245107 0.052904431258912796 43.9033660572618 199818.1235219609 0.008912728043727492 0.009950036148671654 1.7528277248901834e-09 8.756260766054613 0.09719916470175594 DSGRGDS(ph)VSDSGSDALR ddPTM_A549_MK2206_60min_R1 4 DSGRGDSVSDSGSDALR 17 1 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 DSGRGDS(0.991)VS(0.009)DSGSDALR;DSGRGDS(0.996)VS(0.004)DSGSDALR;DS(0.086)GRGDS(0.664)VS(0.175)DS(0.034)GS(0.042)DALR;DSGRGDS(0.997)VS(0.003)DSGSDALR 178.0 1.9057e-30 160313000.0 2594.1699999999996 3271.1099999999997 2920.8 3075.1000000000004 4718.74 3242.16 4997.97 3742.56 6009.349999999999 5963.51 6186.16 True False 3032.0024746328354 3437.595526959531 3335.0133597404424 3828.499638046486 4024.6195968770808 3585.2432192283704 5906.036454228431 4273.079341109307 4648.241819960036 4616.348949162428 4649.965742669588 0.6520483466813962 0.7392733016105999 0.7172124579622776 0.8233393211728286 0.8655159671276439 0.7710257274218217 1.2701247237227433 0.9189485638352453 0.9996292612021348 0.9927705287807432 1.0 12.18300437226711 -6.971760463673034 1.0296935066068884 1.0070194530219463 0.7015621302245396 0.59671644174277 0.10630837468187967 0.25952729678236924 0.5363474740493813 0.016210785321641434 0.04440047685843436 1.0671845675461578e-07 6.971760463673034 -0.30545732279740667 DSGRGDS(ph)VSDSGSDALR ddPTM_A549_PD325901_60min_R1 4 DSGRGDSVSDSGSDALR 17 1 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 DS(0.001)GRGDS(0.994)VS(0.005)DSGSDALR;DS(0.008)GRGDS(0.987)VS(0.005)DSGSDALR;DSGRGDS(0.998)VS(0.001)DS(0.001)GSDALR;DS(0.001)GRGDS(0.997)VS(0.002)DSGSDALR 174.87 3.9667e-30 210432000.0 4198.6900000000005 3850.5699999999997 4217.08 3832.54 4688.04 4944.7 4327.68 4276.43 6389.9 5515.200000000001 5518.94 True False 4624.93791788779 4175.071047476592 4503.276408162099 4069.2672914701375 4358.76824326001 4904.4320026100595 4492.372230597362 4191.133248855563 6121.354724475819 5166.969330770081 4840.145367443144 0.9555369863469535 0.8625920774115335 0.9304010657310072 0.8407324537898682 0.9005449035846983 1.0132819637193822 0.9281482041458816 0.8659106143891648 1.2647047267734206 1.06752358421408 1.0 12.240834662273517 -8.7450793533079 24.998155356176838 1.1249994627661597 0.9122381622447087 0.5835622140740547 0.0744521907817974 149.68408392297746 228717.44396289976 0.017175876451528564 0.019447559743108606 1.7985422595202144e-09 8.7450793533079 -0.21276130052145104 DSGRLDKAS(ph)PDSR ddPTM_A549_MK2206_60min_R1 2 DSGRLDKASPDSR 13 2 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 DS(0.118)GRLDKAS(0.882)PDSR;DS(0.12)GRLDKAS(0.878)PDS(0.002)R 43.023999999999994 0.025230000000000002 10148500.0 1833.4499999999998 2035.12 1822.18 1825.5299999999997 2456.8999999999996 1517.6 1636.54 1389.88 3132.0 3176.5 2798.8 True False 2142.8915364511854 2138.698915299664 2080.5925239153125 2272.7849319511547 2095.4932646357506 1678.1914246986496 1933.8781342831178 1586.899746328984 2422.607000776264 2458.9264438249393 2103.780717049615 1.0185907300530923 1.0165978316879998 0.988977846908483 1.080333569716598 0.996060686198566 0.7977026365429281 0.9192394048535762 0.7543085329513262 1.151549199563811 1.1688130915437747 1.0 11.038768620988138 DSGRLDKAS(ph)PDSR ddPTM_A549_PD325901_60min_R1 2 DSGRLDKASPDSR 13 2 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 DS(0.002)GRLDKAS(0.997)PDS(0.002)R;DS(0.015)GRLDKAS(0.984)PDS(0.001)R 52.887 0.0075932000000000005 18770700.0 3458.9 3546.2 2919.0 3872.8 4018.1 4003.0 3438.8999999999996 3803.6 4937.8 4528.9 4934.4 True False 3810.044981692401 3845.0507193899834 3117.100893372944 4112.014060233039 3735.8825176924793 3970.4008951904216 3569.769221338285 3727.734214133526 4730.281437662046 4242.944481093093 4327.5000817387845 0.8804263222940321 0.8885154585242773 0.7203005972262158 0.9502054263580365 0.8632888381578969 0.9174814142568702 0.8249033284602403 0.8614059257592728 1.0930748349660169 0.9804608667709793 1.0 12.079318131503946 -8.752026068327952 24.894866441395717 1.0439520053355673 0.8628092085141218 0.5711089939797016 0.06158663596776473 82.21574595138581 217431.27070012118 0.010304302846174122 0.011607305456230309 1.7700027115242726e-09 8.752026068327952 -0.18114279682144552 DSGRLS(ph)PDLSVCGQPR ddPTM_A549_MK2206_60min_R1 2 DSGRLSPDLSVCGQPR 16 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DS(0.007)GRLS(0.993)PDLSVCGQPR;DS(0.016)GRLS(0.967)PDLS(0.017)VCGQPR 121.63 2.3014e-08 62303000.0 1525.65 1712.77 1393.76 1680.37 2089.46 1683.6 1483.3200000000002 1535.78 2423.8 2210.5 2321.72 True False 1783.1424214386827 1799.9426771678352 1591.4161258120514 2092.060725434675 1782.1032018909243 1861.7574345167684 1752.8200435949225 1753.4815181289955 1874.8131700132521 1711.146514741075 1745.1728477877778 1.021756912903519 1.0313836130612992 0.9118959923249826 1.1987699259054028 1.0211614305998173 1.0668040342690273 1.0043819131250171 1.0047609440816994 1.0742850900928291 0.9805026000204877 1.0 10.769154217542168 -11.159946951890566 1.55649959240602 1.0000421091122296 1.0420922073255052 0.06184541362065743 0.06564075373365202 1.0496310161032638 4.569219855579053 0.04482078323768198 0.00956043902230005 6.919154817016138e-12 11.159946951890566 0.042050098213275655 DSGRLS(ph)PDLSVCGQPR ddPTM_A549_PD325901_60min_R1 2 DSGRLSPDLSVCGQPR 16 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DS(0.188)GRLS(0.807)PDLS(0.005)VCGQPR;DS(0.002)GRLS(0.998)PDLSVCGQPR 128.01 1.5907e-10 82517000.0 3370.2 3825.0 3807.8 3630.7 4299.0 3934.8 3561.9 3792.2 3320.7 4068.4 4086.2 True False 3712.3402229898884 4147.346173838668 4066.220206161523 3854.9600930820343 3997.0530707448725 3902.7562933787804 3697.450053646469 3716.5615960766513 3181.1425270453133 3811.520529682514 3583.6233045559798 1.035918093921944 1.1573052805427424 1.1346673075242037 1.0757157673857893 1.1153664129997385 1.089053162595822 1.0317630340626978 1.0370960562042508 0.8876888714840705 1.0635940794437855 1.0 11.807203279978655 -8.194302672366112 1.6008995279568532 0.948465569949405 1.105219054023897 0.3878534234443881 0.054977695857202115 0.1681385843329837 0.8428441759108536 0.009054091927932155 0.012015444809671146 6.392891411280382e-09 8.194302672366112 0.15675348407449208 DSGS(ph)DQDLDGAGVR ddPTM_A549_MK2206_60min_R1 1 DSGSDQDLDGAGVR 14 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DS(0.023)GS(0.977)DQDLDGAGVR 119.96 2.4359e-06 2900200.0 562.32 494.16 337.89 433.16 616.21 540.92 359.76 450.16 761.96 576.57 835.44 True False 657.2258685959423 519.3106332719846 385.807882813852 539.2842194452916 525.5663252884513 598.1597953663639 425.1237351911316 513.9715585571818 589.3772766000903 446.32243655474423 627.9771910289876 1.046576018977741 0.8269577951088561 0.6143660762291014 0.8587640238360155 0.8369194499361856 0.9525183460664143 0.6769732105946946 0.8184557749860324 0.9385329356219955 0.7107303305449861 1.0 9.29456834923086 -8.880241323872221 3.191762798910979 0.9746377065336166 0.8219003775960709 0.0 0.136130255941785 0.2346731187844317 4.518955025760683 0.019784882151201128 0.020767159608101084 1.3175244279612117e-09 8.880241323872221 -0.15273732893754566 DSGS(ph)DQDLDGAGVR ddPTM_A549_PD325901_60min_R1 1 DSGSDQDLDGAGVR 14 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DS(0.003)GS(0.997)DQDLDGAGVR 119.96 2.4359e-06 3242700.0 708.19 643.44 645.89 590.57 945.8 783.14 514.2 843.48 813.95 659.17 958.16 True False 780.0849274580768 697.6649469528767 689.72397945209 627.048167618216 879.3702708328681 776.7623674892399 533.7681623810369 826.6561297027404 779.7425120873717 617.5498937053444 840.3123942766765 0.9283272896736906 0.8302447419610087 0.820794723664394 0.7462084004579821 1.0464801862048123 0.9243733316082536 0.6352020582065714 0.9837485860413957 0.9279198038707472 0.7349051351752565 1.0 9.714781953248567 DSGS(ph)ISLQETR ddPTM_A549_MK2206_60min_R1 2 DSGSISLQETR 11 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DS(0.001)GS(0.912)IS(0.087)LQETR;DS(0.001)GS(0.725)IS(0.274)LQETR 190.37 5.0473e-19 133275000.0 2987.61 3773.2 3940.6000000000004 3631.4 5507.3 4534.0 4702.5 4619.6 6495.3 6173.5 6014.2 True False 3491.8455279483637 3965.2397633597475 4499.43633435812 4521.093163019739 4697.183465476192 5013.784870574382 5556.883379854061 5274.442446931663 5024.124920862732 4778.902062318042 4520.708156524152 0.7724111814006475 0.8771280131492741 0.9952945818598501 1.0000851650852602 1.0390370939334705 1.1090706802956602 1.2292063958684285 1.1667292522123427 1.1113579436912033 1.057113597439656 1.0 12.142333069223291 -5.540767959569659 0.9480846133983826 1.0789044850874618 0.6838557153030047 0.7421061098709976 0.062143540039517844 0.6968159540944175 0.6251573974364982 0.01196104930703098 0.25342806844653293 2.8789361988715612e-06 5.540767959569659 -0.39504876978445713 DSGS(ph)ISLQETR ddPTM_A549_PD325901_60min_R1 2 DSGSISLQETR 11 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DS(0.011)GS(0.923)IS(0.066)LQETR;DS(0.026)GS(0.856)IS(0.117)LQET(0.002)R 245.18 1.9048e-50 177123000.0 8272.8 8507.5 9303.8 9546.4 10660.2 8283.6 9362.7 9409.6 8600.1 9269.2 9042.900000000001 True False 9112.648565886526 9224.456882073848 9935.21181629434 10136.059446552546 9911.464327693531 8216.141108018828 9719.002671966024 9221.918146311604 8238.667704653362 8683.941130108427 7930.680627666116 1.1490373895649162 1.16313558887927 1.2527565139409893 1.2780819102956917 1.2497621317793919 1.0359944491216662 1.2254941446086431 1.1628154731311477 1.0388348858624865 1.0949805619223358 1.0 12.95322897102279 -8.753294836072403 2.721466200784634 1.0157030173432111 1.1946652748612296 0.4751209962019348 0.06691395813207028 0.12985260085593447 1.9041037154420133 0.01159014471132362 0.012614449657793906 1.7648392907219806e-09 8.753294836072403 0.17896225751801853 DSGS(ph)ISLQETRR ddPTM_A549_PD325901_60min_R1 1 DSGSISLQETRR 12 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DS(0.111)GS(0.878)IS(0.011)LQETRR 83.729 0.00022610000000000002 4012000.0 490.42 449.2 506.9 537.27 597.46 831.25 580.44 0.0 0.0 444.54 581.29 True False 540.2070773718779 487.0556604675368 541.3012822373228 570.4559476712991 555.4964707251062 824.4805756000591 602.5289618289557 0.0 0.0 416.471668534329 509.79501510091177 1.0596554720429077 0.9553951020316003 1.0618018344690452 1.1189908311645216 1.0896467291174827 1.6172786143011944 1.1819043811357937 0.0 0.0 0.8169394682132979 1.0 8.993773456182398 -8.232698369186451 23.972736762831026 0.47499999890931527 1.1575821273453886 0.5267149448398688 0.3192972091154303 348.3302180496326 290540.71127093915 0.06780089016676712 0.08752026683502769 5.85196379837255e-09 8.232698369186451 0.6825821284360734 DSGS(ph)PNPAR ddPTM_A549_PD325901_60min_R1 1 DSGSPNPAR 9 0 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 DS(0.091)GS(0.909)PNPAR 72.321 0.0027034000000000003 5691200.0 1301.4 1518.7 1719.7 1687.8 1916.5 1496.8 1700.3 1535.3 2351.6 1957.1 1917.2 True False 1433.5171699599555 1646.686178878114 1836.4091833961795 1792.0515727280854 1781.891651566072 1484.6105570624588 1765.0058469398602 1504.677237080449 2252.7704299092848 1833.5283719992249 1681.3965541321334 0.852575299049472 0.9793562231534754 1.0921927839587235 1.0658113746718527 1.05976882561521 0.882962768904182 1.0497260997723898 0.8948973003320448 1.339821010322024 1.0904794395428123 1.0 10.715444306207875 -8.742905046551936 24.999355318988158 1.1604710675624834 0.992056347999899 0.2968976334942598 0.10751395462571853 259.6929357314336 350277.0332570671 0.023477192758952763 0.026596906380279083 1.807569286856682e-09 8.742905046551936 -0.16841471956258447 DSGS(ph)QEVLSELR ddPTM_A549_PD325901_60min_R1 1 DSGSQEVLSELR 12 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DS(0.164)GS(0.834)QEVLS(0.002)ELR 46.481 0.03746 22321000.0 524.41 450.47 323.25 486.01 553.55 476.76 403.94 559.19 623.41 465.33 512.33 True False 577.6477171497623 488.43268782460245 345.187688860159 516.0297338912055 514.6705576438295 472.8774246292744 419.3121577444494 548.0365167739316 597.210245666672 435.9489843862856 449.3166579274545 1.2856138470678018 1.0870567097992248 0.7682503703566053 1.1484767474935735 1.145451762277923 1.0524368867392937 0.9332219278906646 1.219711103749944 1.3291522473736017 0.9702488805938567 1.0 8.811588738980475 -8.28725091972514 24.793794292890034 1.1645968424526838 1.0562767922164369 0.0274212782769655 0.15465259965759587 1374.381009900182 1320185.3048368152 0.02778465294879667 0.033595960250661056 5.161180886514676e-09 8.28725091972514 -0.10832005023624691 DSGSDQDLDGAGVRAS(ph)DLEDEESAAR ddPTM_A549_MK2206_60min_R1 2 DSGSDQDLDGAGVRASDLEDEESAAR 26 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DSGSDQDLDGAGVRAS(1)DLEDEESAAR;DSGSDQDLDGAGVRAS(1)DLEDEESAAR 346.42 1.2023999999999993e-256 166868000.0 9053.9 10463.2 8845.48 8922.3 13477.4 10818.4 9634.4 10218.800000000001 14270.0 13772.6 12400.0 True False 10581.976973397355 10995.7321880594 10099.902072485931 11108.26390053727 11494.892313403827 11963.195907327274 11384.845770306425 11667.346193762496 11037.86778450744 10661.360094513882 9320.737777410046 1.1353153823342266 1.179706204664282 1.083594701801856 1.1917794670138144 1.2332599186797328 1.283503108125362 1.22145328429891 1.2517620892671977 1.184226833551639 1.1438322104021637 1.0 13.186228439722345 -10.391183989595499 0.8154371369074415 1.0031621211715267 1.1974587953188822 0.266181341811901 0.06590430851536039 0.3132300209684737 0.386683210517185 0.034952933596299 0.011223892657403907 4.062711752271437e-11 10.391183989595499 0.19429667414735552 DSGSDQDLDGAGVRAS(ph)DLEDEESAAR ddPTM_A549_PD325901_60min_R1 3 DSGSDQDLDGAGVRASDLEDEESAAR 26 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 DSGSDQDLDGAGVRAS(1)DLEDEESAAR;DSGSDQDLDGAGVRAS(1)DLEDEESAAR;DSGSDQDLDGAGVRAS(1)DLEDEESAAR 261.0 8.090899999999998e-126 233730000.0 11029.800000000001 9651.25 11014.64 9901.630000000001 12792.93 11430.66 11845.67 10377.01 11742.91 12342.01 12450.61 True False 12149.537176290398 10464.594708564824 11762.159706811015 10513.231196866684 11894.398730012603 11337.572494783244 12296.463454049348 10170.032394943137 11249.396329769526 11562.733382299391 10919.263900919614 1.1126699827510507 0.9583608202457221 1.077193464096093 0.9628150113654883 1.0893040811121768 1.0383092301513475 1.1261256771176442 0.931384430967606 1.0302339454239318 1.0589297490397303 1.0 13.414587982850513 -8.263351737814533 24.999991586500826 1.0084591098616469 1.0469352828908094 0.12606201520809746 0.058256799261131066 297.6595701565161 3891266.2230427396 0.008400416423401459 0.010399723654820767 5.453160273355785e-09 8.263351737814533 0.03847617302916251 DSGSDTAS(ph)AIIPSTTPSVDS(ph)DDESVVKDK ddPTM_A549_PD325901_60min_R1 2 DSGSDTASAIIPSTTPSVDSDDESVVKDK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 2 DS(0.063)GS(0.063)DT(0.391)AS(0.478)AIIPS(0.004)T(0.001)T(0.001)PS(0.048)VDS(0.945)DDES(0.006)VVKDK;DS(0.063)GS(0.069)DT(0.389)AS(0.474)AIIPS(0.003)T(0.003)T(0.002)PS(0.06)VDS(0.904)DDES(0.035)VVKDK 97.00299999999999 2.6268e-10 27913000.0 5580.7 4428.7 5032.3 5681.299999999999 6558.6 5442.0 5822.8 6651.4 5766.4 5025.0 5684.2 True False 6147.248555705801 4801.922091523999 5373.822139678196 6032.220997831535 6097.946561941687 5397.682156289349 6044.389840358421 6518.732609077645 5524.058261196163 4707.720642428135 4985.0794351126 1.233129508911617 0.9632588916640877 1.0779812457605935 1.210055140815481 1.2232395975459418 1.082767531901411 1.2124961936984449 1.3076486932510443 1.1081184027454498 0.9443622120179516 1.0 12.283400778198288 -9.78203730227155 1.158806945868176 1.0195844202839135 1.155275149718545 0.3462841756039168 0.0938711715674052 0.4102318639756931 1.1217012658008203 0.027577725309136956 0.017957103135763784 1.6518199145905444e-10 9.78203730227155 0.13569072943463145 DSGSDTASAIIPSTTPSVDS(ph)DDESVVK ddPTM_A549_MK2206_60min_R1 2 DSGSDTASAIIPSTTPSVDSDDESVVK 27 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSGSDTASAIIPSTTPS(0.025)VDS(0.784)DDES(0.191)VVK;DSGSDTASAIIPS(0.019)T(0.019)T(0.019)PS(0.095)VDS(0.783)DDES(0.064)VVK 104.29 6.829e-13 5967300.0 2642.05 2850.29 3265.16 2299.35 4061.3999999999996 3341.9 2703.07 2968.9300000000003 4218.1 4417.1 4757.7 True False 3087.9634480792256 2995.35758642708 3728.2087858429545 2862.6908532217426 3463.973440104048 3695.5376398263174 3194.182829895187 3389.784919466797 3262.707084921572 3419.2740421908193 3576.2317841599797 0.8634684870697095 0.8375736717329856 1.0424964070718568 0.8004768778973759 0.9686098802227664 1.033360772697892 0.8931699684687713 0.9478649942324762 0.9123309902263363 0.9561108587356207 1.0 11.804224528739663 -13.461640192357565 0.011142259000592727 2.0039733076664588 4.926171989318439e-07 0.13485614062123552 0.06987842731583153 7829.1070144332825 8.925973692412867 908.1999085360287 708.345831833517 3.4542980516804706e-14 13.461640192357565 -2.0039728150492597 DSGSDTASAIIPSTTPSVDS(ph)DDESVVKDK ddPTM_A549_MK2206_60min_R1 2 DSGSDTASAIIPSTTPSVDSDDESVVKDK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSGSDTASAIIPS(0.03)T(0.03)T(0.082)PS(0.014)VDS(0.72)DDES(0.123)VVKDK;DSGSDTASAIIPSTTPS(0.009)VDS(0.99)DDES(0.001)VVKDK 127.77 1.1904000000000001e-27 75611000.0 2999.1000000000004 3378.6000000000004 3190.3 3449.2 4343.2 3530.7 3544.0 3761.7 5036.6 5470.9 4570.5 True False 3505.2747590448334 3550.556308832621 3642.7325121815725 4294.25415484047 3704.32103340225 3904.3163305110184 4187.898925720955 4294.932494723098 3895.8181417974856 4235.0198902949305 3435.5187106171443 1.0203043715675642 1.0334847829121012 1.0603151427829671 1.2499580169857567 1.0782421361741963 1.1364561393437036 1.219000470810609 1.2501554660290504 1.133982513254208 1.2327162932360123 1.0 11.746312224968387 -4.23118253189587 16.17847757483482 1.096809514314556 1.1031450275218178 0.0 0.09734481408911776 0.0 0.0 0.01321508810105771 0.0 5.872424854438446e-05 4.23118253189587 0.006335513207261778 DSGSDTASAIIPSTTPSVDS(ph)DDESVVKDK ddPTM_A549_PD325901_60min_R1 4 DSGSDTASAIIPSTTPSVDSDDESVVKDK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSGSDTASAIIPSTT(0.001)PS(0.017)VDS(0.979)DDES(0.002)VVKDK;DSGSDTASAIIPSTTPS(0.006)VDS(0.988)DDES(0.006)VVKDK;DSGSDTASAIIPSTTPS(0.047)VDS(0.951)DDES(0.002)VVKDK;DSGSDTASAIIPSTTPS(0.001)VDS(0.999)DDESVVKDK 177.78 3.9624e-58 196459000.0 10279.300000000001 9613.900000000001 9985.9 10504.4 11023.1 10138.7 11435.5 11579.6 11639.599999999999 11536.3 11834.4 True False 11322.846968779297 10424.097092984992 10663.603224094846 11153.232930776696 10248.875483630558 10056.133788675274 11870.684210245709 11348.635793979538 11150.428089799329 10807.896049202724 10378.843824442589 1.0909545572035242 1.0043601454369926 1.0274365241898753 1.0746122708302432 0.9874775704297669 0.9689069378799862 1.1437385908331885 1.0934393065297938 1.074342024835139 1.0413391156103244 1.0 13.341358119811188 DSGSDTASAIIPSTTPSVDS(ph)DDESVVKDKK ddPTM_A549_PD325901_60min_R1 2 DSGSDTASAIIPSTTPSVDSDDESVVKDKK 30 2 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSGSDTASAIIPSTTPS(0.029)VDS(0.967)DDES(0.004)VVKDKK;DSGSDTASAIIPSTT(0.001)PS(0.005)VDS(0.993)DDESVVKDKK 222.04 7.143299999999998e-105 104730000.0 3656.3 4292.700000000001 3651.4 4006.6 4268.6 5376.0 5491.0 5675.3 5088.0 4708.0 5160.9 True False 4027.4848843742043 4654.460894231958 3899.2059616519255 4254.078582351194 3968.788261870564 5332.219638407118 5699.96300979049 5562.101689313276 4874.169053996612 4410.736076527695 4526.142017640583 0.8898273338921164 1.028350607667911 0.8614855535806916 0.9398906542859184 0.8768589775579866 1.1780937534935618 1.259342501312366 1.2288835983570674 1.076892646098951 0.9745023596999179 1.0 12.144066137700685 -7.249725238662456 24.941082992533985 1.0806511109815486 0.923275896485982 0.5016875765357983 0.09515202127079919 667.2160651855132 1420597.9803672584 0.01590151162343652 0.027391569400637198 5.626972093831241e-08 7.249725238662456 -0.15737521449556668 DSGVGSGLEAQESWERLS(ph)DGGK ddPTM_A549_PD325901_60min_R1 2 DSGVGSGLEAQESWERLSDGGK 22 1 A0A0A0MTG6;Q12770-4;Q12770-2;Q12770 A0A0A0MTG6 SCAP Sterol regulatory element-binding protein cleavage-activating protein 1 DSGVGSGLEAQES(0.003)WERLS(0.997)DGGK;DSGVGSGLEAQES(0.026)WERLS(0.974)DGGK 89.396 5.4948e-07 25911000.0 8904.9 7352.2 6820.9 7105.3 7531.1 7238.2 6127.2 6038.6 7594.4 7590.2 8768.3 True False 9808.918892559092 7971.795696548143 7283.807291403738 7544.178243692888 7002.141516884555 7179.254499017566 6360.373948932488 5918.155385809942 7275.2337782374 7110.953476648362 7689.854686833291 1.275566222253081 1.0366640230793431 0.947197000207976 0.9810560213329085 0.9105687691178025 0.9336008014962903 0.827112371814104 0.7696056202392374 0.9460820879611922 0.9247188362120633 1.0 12.90874062087705 -5.180669393075618 1.72264748546485 0.9417115452581564 1.4404331961248635 0.7044331944851678 0.06681599941062406 0.5937789422860098 1.4563841767818628 0.011040869601154935 0.5160641436581749 6.596758827964916e-06 5.180669393075618 0.49872165086670717 DSGYDS(ph)LSNR ddPTM_A549_MK2206_60min_R1 2 DSGYDSLSNR 10 0 Q8WYP3-2;Q8WYP3;E7EPJ1 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 DSGYDS(0.998)LS(0.002)NR;DSGYDS(0.989)LS(0.011)NR 98.898 0.00048485 17667900.0 1631.6799999999998 1902.0 1591.21 1735.33 2612.0 2151.8599999999997 2306.06 1669.59 3065.5 2833.3999999999996 3244.8 True False 1907.0676932540669 1998.803675901156 1816.8675048454506 2160.4859279019247 2227.7782600954783 2379.568396910935 2725.0412518758667 1906.259495404932 2371.169144597584 2193.332972118236 2439.0266080758147 0.7818970432465194 0.8195087619310734 0.7449149996271689 0.8857984249734631 0.9133882560850809 0.9756221555894434 1.117265897326841 0.7815656824296843 0.9721784652723553 0.8992657008562074 1.0 11.252089781676723 -6.670031098330598 1.7716046976429554 0.978731985450712 0.7855061560897557 0.4446465385229029 0.08007782034931729 0.19768378122030364 1.2500081321459464 0.010930108716336687 0.027898324215403263 2.137809002888799e-07 6.670031098330598 -0.19322582936095634 DSGYDS(ph)LSNR ddPTM_A549_PD325901_60min_R1 2 DSGYDSLSNR 10 0 Q8WYP3-2;Q8WYP3;E7EPJ1 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 DSGYDS(0.996)LS(0.004)NR;DSGYDS(0.961)LS(0.039)NR 176.95 7.162600000000001e-11 28242000.0 2740.5 3103.3 2874.3 3277.7 3714.9 3398.8 2956.9 2678.7 3571.8999999999996 3494.8 3595.6000000000004 True False 3018.7135425505294 3364.825982032299 3069.367282570006 3480.1560848032027 3453.9782397092613 3371.1212996685485 3069.4264475777663 2625.2712271005034 3421.7854646168453 3274.1377315737013 3153.3639943863454 0.957299426239558 1.0670591749073055 0.9733628239664461 1.1036328476505142 1.0953312861623563 1.0690555564374609 0.9733815864714617 0.8325303491046518 1.0851222601350008 1.0382999670835205 1.0 11.622675995307105 -11.460723932449655 2.3756166902616105 0.999514155654496 1.0314684066466264 0.0 0.0786574394177555 1.4128553566079949 14.444481966935264 0.06679523031876976 0.011651613036803588 3.461593506810668e-12 11.460723932449655 0.03195425099213045 DSHS(ph)FR ddPTM_A549_MK2206_60min_R1 2 DSHSFR 6 0 Q68CZ2;Q68CZ2-2;A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 Q68CZ2;A0A494C067 TNS3;TNS1 Tensin-3;Tensin-1 1 DSHS(1)FR;DSHS(1)FR 86.794 0.039123000000000005 39527000.0 4417.6 4555.3 3929.9 1028.87 4561.5 4321.9 4063.5 4043.3 5913.0 5924.200000000001 6766.6 True False 5163.182880049501 4787.145312740554 4487.218913463423 1280.9431961877297 3890.509392582512 4779.240589354964 4801.785351204034 4616.450157086931 4573.714941120705 4585.919105464413 5086.266471340551 1.0151223710244732 0.9411904271462286 0.8822225376408087 0.25184350906611475 0.7649047517475266 0.9396362963451527 0.9440687738757937 0.9076304167505022 0.8992283371097628 0.9016277718252805 1.0 12.312391331985227 -7.261198121730329 7.296329064119218 0.9461833723743628 0.7575820514386247 0.1529598758816798 0.18585593705525472 0.1769821909194982 73.73878992969277 0.028382739775267878 0.0473625238994862 5.480269023199825e-08 7.261198121730329 -0.18860132093573811 DSHS(ph)FR ddPTM_A549_PD325901_60min_R1 2 DSHSFR 6 0 Q68CZ2;Q68CZ2-2;A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 Q68CZ2;A0A494C067 TNS3;TNS1 Tensin-3;Tensin-1 1 DSHS(1)FR;DSHS(1)FR 77.923 0.044334 53587000.0 4355.8 4453.1 4936.3 3906.6 5101.7 4252.6 4334.5 2563.9 4688.7 4919.7 4896.1 True False 4797.997609429518 4828.378365155807 5271.307002383303 4147.901809467672 4743.374191909541 4217.9682355450395 4499.451769429408 2512.761003159361 4491.650244393458 4609.069302398747 4293.91073893508 1.1173957497354625 1.1244710611644615 1.2276237963182774 0.9659962820970006 1.1046746148910238 0.9823139072963415 1.0478680259071487 0.5851917182103658 1.0460511448608776 1.073396626670872 1.0 12.068076485678478 -6.272371495476294 24.180474929853144 0.9929839706896016 1.1532942891631646 0.2566233570546088 0.13470495846170372 506.2769571532144 1119822.9241599855 0.018504880877513626 0.04341068123000809 5.341072885899428e-07 6.272371495476294 0.16031031847356292 DSHS(ph)S(ph)EEDEASSQTDLSQTISK ddPTM_A549_MK2206_60min_R1 2 DSHSSEEDEASSQTDLSQTISK 22 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 2 DS(0.028)HS(0.978)S(0.994)EEDEASSQTDLSQTISK;DS(0.023)HS(0.982)S(0.995)EEDEASSQTDLSQTISK 157.55 4.4464999999999994e-33 23035000.0 6553.2 7628.299999999999 6296.8 4069.3 9929.4 7835.299999999999 6944.5 7048.5 9797.2 9258.5 9551.7 True False 7659.21994964243 8016.5478868963155 7189.780924271988 5066.278682677819 8468.798413396646 8664.426245348795 8206.225758935994 8047.646460125946 7578.1498429135445 7166.998419692491 7179.749276490931 1.0667809772580021 1.1165498373523102 1.00139721421943 0.7056344849348193 1.179539575445416 1.2067867430578987 1.1429682908017575 1.1208812662131282 1.055489481746545 0.9982240526364631 1.0 12.8097177493401 -5.751468515326393 24.70580139395497 1.0404373950876367 1.0916653901320061 0.017328943585326995 0.12880734040597594 707.2435963753176 1752364.517740518 0.01782525940448667 0.0673948451926569 1.7722765236851273e-06 5.751468515326393 0.05122799504436948 DSHS(ph)S(ph)EEDEASSQTDLSQTISK ddPTM_A549_PD325901_60min_R1 2 DSHSSEEDEASSQTDLSQTISK 22 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 2 DS(0.02)HS(0.985)S(0.995)EEDEASSQTDLSQTISK;DS(0.026)HS(0.98)S(0.994)EEDEASSQTDLSQTISK 207.21 4.466499999999999e-62 155041000.0 13488.5 14809.199999999999 13502.3 13629.5 15403.6 12763.3 11522.1 5717.9 13243.4 14285.1 16021.6 True False 14857.842590291117 16057.223256891923 14418.647273925826 14471.363260159638 14321.704275535163 12659.359916458627 11960.579820635052 5603.851998894229 12686.82595316407 13383.136348089576 14051.044769290309 1.0574190627279283 1.1427778873771919 1.02616193391106 1.029913682417977 1.0192625894151588 0.9009550623685064 0.8512235223088793 0.39882101942639164 0.902909795070339 0.9524655687767432 1.0 13.778389785969699 -7.0987013159528205 2.3343558492311143 0.8945505409351465 1.0679667097491512 0.2937533191280348 0.156976759750258 0.4272923885993698 4.568931055615491 0.02656179654626734 0.05088330012180398 7.96707093708127e-08 7.0987013159528205 0.17341616881400468 DSHS(ph)S(ph)EEDEASSQTDLSQTISKK ddPTM_A549_PD325901_60min_R1 1 DSHSSEEDEASSQTDLSQTISKK 23 1 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 2 DS(0.154)HS(0.92)S(0.924)EEDEAS(0.001)S(0.001)QTDLSQTISKK 106.63 6.7027e-11 11198000.0 1688.2 1572.9 1771.6 1421.8 2044.6 2399.1 1301.6 1341.8 1865.6 1985.0 2488.7 True False 1859.5848212128462 1705.4538030930294 1891.8314294962345 1509.6213568579155 1900.9943494870815 2379.562525019069 1351.1331002628497 1315.036746378263 1787.1953197987577 1859.6667612377814 2182.6056771691224 0.852002191996843 0.7813842971878606 0.8667765548699446 0.6916601439504734 0.8709747112692864 1.0902393180363221 0.619045902059273 0.602507709080959 0.8188356414965351 0.8520397342912631 1.0 11.091835792462678 -10.295466149943799 0.9853685836362809 0.9866516155591671 0.8007509549139933 0.08534326555463345 0.13459163332005342 0.5495380232442195 1.0453587672920637 0.05918392018894396 0.02449967506065051 5.064468217852238e-11 10.295466149943799 -0.18590066064517385 DSHSS(ph)EEDEASSQTDLSQTISK ddPTM_A549_MK2206_60min_R1 2 DSHSSEEDEASSQTDLSQTISK 22 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 DS(0.01)HS(0.184)S(0.806)EEDEASSQTDLSQTISK;DS(0.005)HS(0.146)S(0.849)EEDEASSQTDLSQTISK 154.92 4.9601e-33 37063000.0 2911.0 3520.5 2985.3 2115.2 4006.4 3122.1 3373.7 3141.2 4497.700000000001 4855.5 5178.4 True False 3402.305632883035 3699.6784127287183 3408.6604296196742 2633.4240949549358 3417.063867245989 3452.4785497177486 3986.6576201198604 3586.474719521543 3478.978131351025 3758.639177708793 3892.460363430659 0.8740758582534104 0.9504729829716158 0.8757084495050367 0.6765448711297707 0.8778673507761362 0.8869656277437009 1.024199927011249 0.9213901709099402 0.89377355362067 0.9656204114551544 1.0 11.926466633209001 -7.55118966081036 8.513326195712255 0.9512998260394596 0.851485631184461 0.3569518669912114 0.0702552735974056 0.23956087262764209 63.87454470635754 0.01174834422421586 0.0175103603585081 2.8106731128502794e-08 7.55118966081036 -0.09981419485499865 DSHSS(ph)EEDEASSQTDLSQTISK ddPTM_A549_PD325901_60min_R1 2 DSHSSEEDEASSQTDLSQTISK 22 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 DS(0.018)HS(0.141)S(0.841)EEDEASSQTDLSQTISK;DS(0.009)HS(0.136)S(0.855)EEDEASSQTDLSQTISK 206.32 1.0235999999999998e-61 49268000.0 5996.9 7644.3 7215.5 7349.9 8627.9 7176.6 6530.9 4528.6 8297.9 7900.299999999999 8850.9 True False 6605.700873315553 8288.511988673185 7705.1872203263 7803.88663016599 8021.906068639138 7118.156148994146 6779.436973345604 4438.273520382027 7949.168119724543 7401.473709726362 7762.2954104778355 0.8509983869460741 1.0677913620093666 0.9926428733858224 1.0053581083286283 1.0334450886539142 0.9170169096354918 0.8733804390122112 0.5717733332322137 1.0240744134775468 0.9535161081006499 1.0 12.922267623624352 -5.218124525582349 21.529040412641958 0.972049686007248 0.8509960077014679 0.0 0.13186979526021686 10646.290329150428 5290881.543298927 0.018583360911232874 7.765436143266807 6.051673297926516e-06 5.218124525582349 -0.12105367830578007 DSIS(ph)SDSETSEPLSCR ddPTM_A549_MK2206_60min_R1 1 DSISSDSETSEPLSCR 16 0 O75164 O75164 KDM4A Lysine-specific demethylase 4A 1 DSIS(0.5)S(0.5)DSETSEPLSCR 137.46 1.4105000000000002e-10 4439100.0 450.72 639.85 677.74 525.94 739.16 688.62 632.38 671.93 824.31 902.35 630.08 True False 526.7905169539824 672.4156319796814 773.8537231000025 654.7953236103435 630.4305431593313 761.4893113310388 747.2752603406939 767.1781351993221 637.6051011525806 698.5085082907077 473.61374667665496 1.1122787728406716 1.4197553105204783 1.6339342523947622 1.3825513473902282 1.3311069359431793 1.6078277217973616 1.577815816336245 1.6198392478736245 1.3462554784920244 1.474848467115108 1.0 8.887567145687575 -9.963451027569459 0.8478592969787972 1.0329227011219395 1.4619067502437724 0.0 0.20030535626374044 0.3021626335570462 0.44211329407027516 0.0645126675123993 0.03153532179357625 1.0877997944885915e-10 9.963451027569459 0.42898404912183286 DSIS(ph)SDSETSEPLSCR ddPTM_A549_PD325901_60min_R1 1 DSISSDSETSEPLSCR 16 0 O75164 O75164 KDM4A Lysine-specific demethylase 4A 1 DSIS(0.931)S(0.069)DSETSEPLSCR 190.86 1.6074e-34 5728700.0 1062.5 1108.1 1261.5 1008.0 1241.2 1003.5 1115.0 1286.6 1050.1 1156.0 1254.0 True False 1170.3642178288403 1201.483475877288 1347.112976015747 1070.2618706659018 1154.0223939075452 995.3278287093644 1157.431935151411 1260.937753681825 1005.9679488211169 1083.0099627158054 1099.7659497609516 1.0641939024237241 1.092490157690776 1.2249087874638778 0.9731724017265102 1.0493345371880143 0.9050360478297331 1.0524347797847295 1.146551003834867 0.9147109428508648 0.9847640427049152 1.0 10.102980809278314 -6.289294297455124 24.249994040820045 0.9821024844132196 1.1237268782407008 0.32483967311997664 0.07516998797046555 365.86725177722457 318517.04056375363 0.0111060583847155 0.02581440359992939 5.136954305050023e-07 6.289294297455124 0.14162439382748127 DSISAVSSEKVS(ph)PS(ph)KSPSLSPSPPSPLEK ddPTM_A549_PD325901_60min_R1 1 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 DS(0.01)IS(0.027)AVS(0.035)S(0.038)EKVS(0.871)PS(0.365)KS(0.301)PS(0.297)LS(0.055)PSPPSPLEK 70.525 7.3459e-05 6148000.0 1338.1 1310.9 1132.4 1423.0 2206.0 1716.0 1993.5 1782.8 1531.4 1155.5 1456.0 True False 1473.9429269428442 1421.3741436039502 1209.2514736743824 1510.8954781325187 2051.0581702868535 1702.0254649379863 2069.363733385056 1747.2406554204565 1467.040583586953 1082.5415328011368 1276.9212303444538 1.154294322873184 1.1131259390373907 0.947005535610198 1.183233109629597 1.6062526971484168 1.3329134362335406 1.6205883998238781 1.3683229739622487 1.1488888654402072 0.8477747155234607 1.0 10.318453816674971 -9.172377510538457 1.9848084821689442 1.0504773126004756 1.2902030201651449 0.28760379532783065 0.20153821741612185 0.3558749911188477 2.896971273375559 0.043244469774223436 0.04044739909809246 6.723919254082864e-10 9.172377510538457 0.23972570756466927 DSISAVSSEKVS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 DSISAVSSEKVSPSK 15 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DSIS(0.001)AVS(0.025)S(0.021)EKVS(0.933)PS(0.021)K 57.803999999999995 0.0036260999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DSISAVSSEKVS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 DSISAVSSEKVSPSK 15 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DSISAVSS(0.003)EKVS(0.967)PS(0.03)K;DSISAVS(0.011)S(0.08)EKVS(0.89)PS(0.018)K 200.68 3.5613e-39 217780000.0 40363.0 41079.0 40288.0 38614.0 48691.0 34368.0 38858.0 41295.0 41028.0 37810.0 44004.0 True False 44460.62204632988 44540.87149676305 43022.18595142484 40999.09908124318 45271.11213483102 34088.11840267408 40336.76245391349 40471.338829699205 39303.73583871327 35422.67014730503 38591.78696433885 1.152074717022412 1.1541541607783417 1.1148016025062522 1.062378871419684 1.1730763381510234 0.8832998180201805 1.0452162396933604 1.0487034162760376 1.0184481966339705 0.9178810553664624 1.0 15.236006227909098 -7.234173472308386 24.999998800023015 1.007450939525719 1.1278217646168562 0.6142535430819438 0.056021584452352564 381.20965030961645 349529.90032121725 0.006812132640839606 0.011797178340978856 5.8321210256118845e-08 7.234173472308386 0.12037082509113728 DSISAVSSEKVS(ph)PSKSPSLSPSPPS(ph)PLEK ddPTM_A549_PD325901_60min_R1 1 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 DS(0.001)IS(0.004)AVS(0.021)S(0.023)EKVS(0.516)PS(0.163)KS(0.202)PS(0.064)LS(0.006)PS(0.029)PPS(0.97)PLEK 85.939 2.493e-07 38835000.0 1945.9 2325.8 1729.0 1714.7 1986.2 2121.2 2072.9 2157.2 2150.4 2622.1 2376.3 True False 2143.4463355041335 2521.803328395811 1846.3403373216229 1820.6131246337527 1846.6961640180189 2103.925650481619 2151.7853438344036 2114.1729537093365 2060.026166217437 2456.5401585096147 2084.0301646068174 1.028510225958522 1.2100608576707363 0.8859470312273344 0.8736020982581305 0.8861177709327566 1.0095466400691735 1.0325116115775461 1.0144637009648112 0.9884819333246508 1.178745010618921 1.0 11.025160444242864 -5.7609778077249425 24.999999999182346 0.9785913878141387 1.1192855254808214 0.24200377854305744 0.0906579660405059 8.900909214394876 481936.76776597794 0.009485438560115982 0.032761675772847824 1.7338925967115624e-06 5.7609778077249425 0.1406941376666827 DSISAVSSEKVSPS(ph)KSPSLSPSPPS(ph)PLEK ddPTM_A549_PD325901_60min_R1 1 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 DSIS(0.002)AVS(0.01)S(0.01)EKVS(0.376)PS(0.576)KS(0.024)PS(0.001)LS(0.003)PS(0.002)PPS(0.995)PLEK 109.85 2.3198e-15 31375000.0 2489.8 2524.9 2144.4 2008.4 2750.8 2526.8 2188.3 2759.1 2434.9 3091.7 2485.9 True False 2742.562663106116 2737.682184137321 2289.9318793247485 2132.4543065926578 2557.5932977448215 2506.222578557869 2271.576953983708 2704.067586027924 2332.5696205928375 2896.489534367177 2180.1500594184586 1.2579696756459404 1.2557310779183617 1.050355166806992 0.9781227202137988 1.1731271830100738 1.1495642548689462 1.0419360558096797 1.2403125988259804 1.0699124175035162 1.328573472203926 1.0 11.090211723576303 -2.000000000003728 0.030450107681560503 0.4873252716801319 2.0409298213106153 0.0 0.13045505663543067 939.7260259684098 2.133588260943346 34.12279560509757 85.84170327523573 0.009999999999914157 2.000000000003728 1.5536045496304833 DSISS(ph)DSETSEPLSCR ddPTM_A549_MK2206_60min_R1 1 DSISSDSETSEPLSCR 16 0 O75164 O75164 KDM4A Lysine-specific demethylase 4A 1 DSIS(0.373)S(0.623)DS(0.001)ET(0.002)S(0.002)EPLSCR 103.85 1.0183e-06 2832700.0 466.27 784.79 437.57 375.19 939.63 497.29 466.28 580.38 740.36 702.38 750.54 True False 544.9649767929828 824.7324588908879 499.6240056907787 467.1115668429188 801.4116717203341 549.9128977256138 550.9970403739185 662.6506423392063 572.669642111978 543.7118701759046 564.1602041497847 0.9659755735771367 1.461876347931697 0.885606609639783 0.827976811208932 1.4205391763286428 0.974745991795642 0.9766676846770791 1.1745788474000063 1.015083371530995 0.9637543842627171 1.0 9.13996109160627 -2.0000000000449645 0.0989862066909646 0.9442859191680552 1.490161226241149 0.033978284794141556 0.19360150186881334 295.3774620323199 2.010658278727091 1.2470452173742972 21.984485540255918 0.009999999998964655 2.0000000000449645 0.5458753070730938 DSITPDIATKPGQPLFLDS(ph)ISPKK ddPTM_A549_PD325901_60min_R1 1 DSITPDIATKPGQPLFLDSISPKK 24 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 DSITPDIATKPGQPLFLDS(0.553)IS(0.447)PKK 156.96 3.8596e-34 36969000.0 3623.5 4011.5 4361.4 4202.2 4615.0 4736.0 4378.7 4284.2 4536.1 4552.6 4539.5 True False 3991.3550525202845 4349.563183360473 4657.390831228759 4461.760350111363 4290.858320885692 4697.431586215794 4545.333824616581 4198.748270110119 4345.463491712667 4265.148059048426 3981.1702782614325 1.0025582362840555 1.0925338228084824 1.1698547175084988 1.1207157790949356 1.077788193164021 1.1799122513963785 1.1417079669854056 1.0546517673551261 1.09150405232361 1.0713302272795542 1.0 11.958976862785578 -10.236462857542922 0.5758402679275022 0.9950732520061462 1.1109903429108818 0.16589289333167312 0.05193146840575823 0.718375571614632 0.42527271648394066 0.04066234572667413 0.01134728600363653 5.801457865967213e-11 10.236462857542922 0.11591709090473568 DSITPDIATKPGQPLFLDSIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DSITPDIATKPGQPLFLDSISPK 23 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 DSITPDIATKPGQPLFLDS(0.21)IS(0.79)PK;DSITPDIATKPGQPLFLDS(0.023)IS(0.977)PK 206.96 2.9167999999999998e-62 73747000.0 19829.3 21642.0 23398.0 19859.6 31731.0 26518.0 21977.0 24588.0 33820.0 28841.0 32289.0 True False 23176.00106016064 22743.485359544065 26716.188233089193 24725.20289153131 27063.411933801537 29324.11715877622 25969.936425104257 28073.424297591908 26159.823999442284 22325.798069055585 24270.75016893491 0.9548943027654959 0.9370738523218104 1.1007565916641628 1.018724296506421 1.1150628532463354 1.208208108718012 1.0700096307012466 1.1566772391536622 1.07783335155933 0.9198643599253581 1.0 14.566931080056483 -5.753940657987747 24.973697814749297 1.0662999775131545 0.9459840183428818 0.30391716554481285 0.0740264940395155 151.64101611265346 505011.4474306868 0.009481420803830947 0.03534085407400447 1.762216819325642e-06 5.753940657987747 -0.12031595917027271 DSITPDIATKPGQPLFLDSIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DSITPDIATKPGQPLFLDSISPK 23 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 DSITPDIATKPGQPLFLDS(0.001)IS(0.999)PK;DSITPDIATKPGQPLFLDS(0.001)IS(0.999)PK 277.75 1.0618999999999999e-139 144388000.0 25768.0 23722.0 26504.0 26507.0 30750.0 28578.0 29655.0 28264.0 27788.0 29524.0 29349.0 True False 28383.94839060099 25721.136192366226 28302.720821499304 28144.277188235188 28590.22608174105 28345.27024300571 30783.53725283867 27700.252347320937 26620.166995373023 27659.84960140265 25739.25905863969 1.1027492409915962 0.9992959056734237 1.0995934559351332 1.0934377374312267 1.1107633679977433 1.1012465501990152 1.1959760451032022 1.0761868585344152 1.03422429273222 1.0746171651012733 1.0 14.651682903667053 -8.8071911217494 2.8080471367492468 1.0143254003825526 1.0987099800379043 0.2384425674965548 0.04630952308947525 0.18674096883332789 2.877334924855376 0.008084537948571287 0.008650829603668263 1.5588663351701053e-09 8.8071911217494 0.08438457965535173 DSITPDIATKPGQPLFLDSIS(ph)PKK ddPTM_A549_PD325901_60min_R1 1 DSITPDIATKPGQPLFLDSISPKK 24 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 DSITPDIATKPGQPLFLDS(0.034)IS(0.966)PKK 152.21 3.9816999999999997e-29 37969000.0 9755.1 8253.6 9796.5 9571.7 12142.0 11624.0 11290.0 11479.0 10883.0 11308.0 11838.0 True False 10745.430570674935 8949.159838011723 10461.349401140129 10162.922170092084 11289.187807626009 11529.337997924918 11719.64712812505 11250.042339898706 10425.625356651959 10594.010950164646 10382.001047264863 1.0350057297967445 0.8619879536969781 1.007642876697279 0.9788982031329602 1.087380723256635 1.110512120489751 1.1288427996462773 1.0836102104673289 1.0042019172593504 1.0204209094118362 1.0 13.34179691792099 -6.2443228795586965 2.3473571272897997 1.030656861222022 0.9507257779781624 0.23887672937351123 0.06192942417722519 0.3991673933200329 4.2587371048726155 0.009807669385503376 0.030230383494158023 5.69740536820015e-07 6.2443228795586965 -0.07993108324385956 DSKPIALKEEIVT(ph)PK ddPTM_A549_MK2206_60min_R1 2 DSKPIALKEEIVTPK 15 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 DSKPIALKEEIVT(1)PK;DS(0.035)KPIALKEEIVT(0.965)PK 95.958 6.3208000000000005e-06 21175400.0 3874.6 4682.8 4748.6 3743.4 8865.6 7147.3 6665.099999999999 5628.6 8926.8 6398.400000000001 6307.0 True False 4528.537755124912 4921.134518144023 5422.022884163065 4660.533168047614 7561.481984189302 7903.622542006236 7876.062395548178 6426.471286864561 6904.894053170353 4952.996996118208 4740.797835655256 0.9552269284857607 1.0380393108376118 1.1436941780947412 0.9830693755797861 1.5949808969536414 1.6671503016989178 1.6613369033188434 1.3555674613524873 1.4564835482414078 1.0447602213422844 1.0 12.210914157431889 -6.726159718573584 24.99486712873294 1.3218821477778517 1.0387014396407566 0.3639837404577485 0.21945523258760916 233.7835079005159 165629.41533001972 0.03882618894572157 0.08082066614024178 1.8786257957887976e-07 6.726159718573584 -0.28318070813709517 DSKPS(ph)STPR ddPTM_A549_MK2206_60min_R1 2 DSKPSSTPR 9 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 DS(0.022)KPS(0.569)S(0.391)T(0.018)PR;DS(0.021)KPS(0.578)S(0.336)T(0.065)PR 64.82 0.005067800000000001 122865000.0 6149.530000000001 6136.15 4961.25 3684.71 4767.57 4382.31 3435.63 4267.99 4868.900000000001 8038.219999999999 8347.7 True False 7187.420322426394 6448.453825384269 5664.8298517571475 4587.4641154129185 4066.2667685617885 4846.043135458054 4059.8394994849596 4872.990652671196 3766.101924035617 6222.380519213756 6274.735705200471 1.145453874092178 1.0276853286489536 0.90279975410951 0.7311007715609201 0.6480379349191849 0.7723103192125967 0.6470136257882837 0.7766049251496735 0.6002008851009119 0.9916561926356001 1.0 12.615338978016062 -5.787520751932304 2.030712823643699 0.7749384295032328 1.1296775513649127 0.5014698254121419 0.12287242079632676 0.2784644636504704 2.1310841392217283 0.0217145869661638 0.1237046914931546 1.631094968608091e-06 5.787520751932304 0.3547391218616799 DSKPS(ph)STPR ddPTM_A549_PD325901_60min_R1 1 DSKPSSTPR 9 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 DS(0.084)KPS(0.425)S(0.425)T(0.067)PR 63.408 0.0018795 33950000.0 8052.1 6763.7 7682.2 7072.8 9337.8 7231.4 7392.3 7779.3 10099.0 9141.8 10919.0 True False 8869.543264357277 7333.700736207214 8203.560288821387 7509.6707925057435 8681.945141661185 7172.50987596303 7673.618021721772 7624.13575875721 9674.57415021852 8564.58518785065 9576.032221243882 0.9262232059621416 0.7658391875434396 0.8566763456186223 0.784215280295942 0.9066328246474342 0.749006447581831 0.8013358606603564 0.7961685573533784 1.0102904759192464 0.894377231610667 1.0 13.225212291303418 -8.765062965243787 24.999480982119668 1.004859404941084 0.820733295777355 0.49549318771043327 0.062179754714981036 31.177650385801233 215097.04019594408 0.008145664549494634 0.008838010541570499 1.7176593379893425e-09 8.765062965243787 -0.18412610916372896 DSKPSS(ph)TPR ddPTM_A549_MK2206_60min_R1 1 DSKPSSTPR 9 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 DSKPS(0.182)S(0.632)T(0.186)PR 69.26100000000001 0.0011403 16087000.0 6023.0 5526.3 4090.6 3716.0 4487.3 4068.8 3507.3 3892.2 5141.4 7767.1 8012.4 True False 7039.535151787883 5807.565065264226 4670.708589891212 4626.42016681758 3827.2241142903663 4499.357715349147 4144.531010773449 4443.931269362589 3976.8811091286966 6012.5067155147735 6022.699949009692 1.168833780760635 0.9642793289443482 0.7755173974189454 0.7681638145659736 0.6354665094879371 0.7470665570993575 0.6881516671696274 0.7378636337500594 0.6603153307982098 0.998307530911183 1.0 12.556194670287518 -5.452512313465046 2.3941616307032256 0.791803810236485 1.1890390628126701 0.5134366046896297 0.1149962564283631 0.2992969796716228 2.680645894691444 0.01969220502653209 0.20441944192622646 3.527667845506187e-06 5.452512313465046 0.3972352525761851 DSKPSS(ph)TPR ddPTM_A549_PD325901_60min_R1 4 DSKPSSTPR 9 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 DS(0.012)KPS(0.071)S(0.532)T(0.385)PR;DS(0.005)KPS(0.043)S(0.54)T(0.411)PR;DS(0.005)KPS(0.043)S(0.54)T(0.411)PR;DS(0.004)KPS(0.037)S(0.48)T(0.48)PR 54.776 0.0053138000000000005 70245000.0 12887.3 12830.6 10630.3 10516.1 10953.1 12812.7 9142.599999999999 10719.3 12566.4 13593.800000000001 17126.7 True False 14195.609208871172 13911.879690994621 11351.736083186835 11165.655613204057 10183.792042143676 12708.357619237144 9490.526646022685 10505.495152371825 12038.277908833154 12735.485148067584 15020.22447509639 0.9450996709408416 0.9262098388782798 0.7557634109934956 0.7433747499391086 0.678005316034288 0.8460830688853996 0.6318498542919933 0.6994233122008257 0.801471238248981 0.8478891356905541 1.0 13.87461875343282 -10.281409917002527 0.8675774762047357 0.9899898174716544 0.7771764467640686 0.18139554418455084 0.10182500195973697 0.42087870436838426 0.6119128026864147 0.0502370431238107 0.01902077171685481 5.2310645964216564e-11 10.281409917002527 -0.21281337070758577 DSKPSST(ph)PR ddPTM_A549_MK2206_60min_R1 3 DSKPSSTPR 9 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 DS(0.002)KPS(0.014)S(0.087)T(0.898)PR;DSKPS(0.003)S(0.084)T(0.912)PR;DSKPS(0.008)S(0.036)T(0.956)PR 131.12 0.0001881 4471561000.0 27159.0 22343.4 17773.1 12982.699999999999 18108.1 16837.7 15915.900000000001 16218.5 19319.0 33967.4 35577.0 True False 31742.775226200734 23480.58362362244 20293.592832101767 16163.462082815548 15444.422477655016 18619.454238039307 18807.613011253423 18517.522042073153 14943.277346103661 26294.140748616155 26742.249024751392 1.1869897403476082 0.8780332425253349 0.758858868351684 0.6044167066074133 0.5775289304710449 0.6962561084823493 0.7032921200399399 0.6924444546505489 0.5587891030508636 0.983243433425495 1.0 14.706833180822672 -5.3095742149105405 2.1838262447587877 0.7405494423162315 1.2768904282614875 0.48227263386606567 0.13830312598815253 0.4828175959895884 2.797565762818507 0.02428434130423474 0.48084821845955755 4.902592371212841e-06 5.3095742149105405 0.5363409859452559 DSKPSST(ph)PR ddPTM_A549_PD325901_60min_R1 3 DSKPSSTPR 9 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 DSKPS(0.014)S(0.108)T(0.878)PR;DS(0.009)KPS(0.15)S(0.398)T(0.443)PR;DSKPS(0.005)S(0.025)T(0.97)PR 66.267 0.0021565 8148646000.0 28935.1 26201.5 22560.0 21051.1 26494.0 20212.0 16572.0 19103.800000000003 22387.2 27435.5 31193.0 True False 31872.57005110522 28409.592359172257 24091.057264300638 22351.378636483096 24633.152839338138 20047.400173267233 17202.65652854637 18722.759722358816 21446.343837585093 25703.21784782827 27356.45874871879 1.165083914693379 1.0384967082226164 0.8806350809360117 0.8170421048203068 0.9004510805146446 0.7328214648471683 0.6288334570845007 0.6843999764127248 0.7839590655566672 0.9395667064923764 1.0 14.739593867217696 -5.5931428054018015 2.0486540383607985 0.8450230773544853 1.1740682101954152 0.5150958673203443 0.10703300077354942 0.33644796250358344 2.3498491642759065 0.019037287530300265 0.1594995988981605 2.5518620573502252e-06 5.5931428054018015 0.32904513284092984 DSKPSSTPR ddPTM_A549_PD325901_60min_R1 1 DSKPSSTPR 9 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 68.536 0.0044653 40415000.0 10627.0 9841.6 9664.8 9315.9 10209.0 8648.8 6801.3 7279.5 9323.9 11074.0 11593.0 False True 11705.845216816077 10670.986171098208 10320.711447163692 9891.321985056024 9491.955059138032 8578.367040300502 7060.127193314162 7134.304661842722 8932.048907735656 10374.785750099332 10167.1344940819 1.151341631570806 1.0495569009448622 1.0151052347316922 0.9728721490616238 0.9335919638579703 0.8437349820929201 0.6944067866343 0.7017025953571745 0.878521761754488 1.0204237738901065 1.0 13.311625506759258 -5.96492268006246 1.1062941980956695 0.8963599456571507 1.1410642769651682 0.4473128145054749 0.10101365786510758 0.6573008078130148 1.2161184769327709 0.01786317800123988 0.13934555436460025 1.084119908926131e-06 5.96492268006246 0.2447043313080175 DSKRDS(ph)LEEGELR ddPTM_A549_MK2206_60min_R1 2 DSKRDSLEEGELR 13 2 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DS(0.022)KRDS(0.978)LEEGELR;DS(0.029)KRDS(0.971)LEEGELR 66.977 0.0015180999999999999 17576600.0 4445.4 4814.9 4325.2 4610.1 5977.9 5195.799999999999 4358.9 4859.200000000001 6856.6 7230.8 6570.6 True False 5195.674840404756 5059.957843899304 4938.578397544976 5739.574706955254 5098.558828876244 5745.616107307092 5150.855707484503 5548.0064806758855 5303.591047740271 5597.357257991301 4938.938680665358 1.0519820504644959 1.0245030706106362 0.9999270525220747 1.1621068974644644 1.0323187143091603 1.1633301157999112 1.0429074018774 1.1233195711448831 1.073832130879136 1.1333117537788995 1.0 12.269985341726457 -10.46349622324569 0.8976151053480746 1.0019921143990744 1.0749352531343883 0.0 0.06461963536849465 0.642938521810975 0.9670054283039063 0.028430579509922345 0.009226502434311532 3.4395670251767826e-11 10.46349622324569 0.07294313873531388 DSKRDS(ph)LEEGELRDHR ddPTM_A549_MK2206_60min_R1 2 DSKRDSLEEGELRDHR 16 3 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9 P21127 CDK11B Cyclin-dependent kinase 11B 1 DS(0.227)KRDS(0.773)LEEGELRDHR;DS(0.007)KRDS(0.993)LEEGELRDHR 84.946 1.6292e-05 10684300.0 1508.85 1796.26 1202.07 1022.51 1690.71 1070.33 1297.51 1234.01 1950.93 1760.65 2097.69 True False 1763.506992159247 1887.6819615532117 1372.5416013911233 1273.0249959022178 1442.0087986699946 1183.5916101724474 1533.2507717585202 1408.9346964971294 1509.04746999503 1362.9179421754693 1576.7756797012316 1.1184260480814856 1.1971785117277371 0.8704735994223308 0.8073596087830524 0.9145300864503613 0.7506404527984063 0.9723962587050058 0.8935543049243981 0.9570463886663734 0.8643702206478195 1.0 10.622761714098148 -5.757228438669471 24.99957586039731 0.9365363082731212 1.157802345715338 0.5758806699261422 0.08089449066665448 64.98543317585613 385790.42336196464 0.01214175836024503 0.04389704430913765 1.748926512212503e-06 5.757228438669471 0.22126603744221673 DSLAKS(ph)PSVK ddPTM_A549_PD325901_60min_R1 2 DSLAKSPSVK 10 1 Q8IWJ2;B8ZZW2;U3KQE0;U3KPU4 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 1 DS(0.073)LAKS(0.47)PS(0.457)VK;DS(0.01)LAKS(0.758)PS(0.232)VK 60.448 0.0022319 16617500.0 6461.1 6088.2 6165.8 5464.6 7914.0 6795.4 5992.8 6834.6 7142.5 7221.5 7883.8 True False 7117.02611558957 6601.273980539759 6584.24826596742 5802.135930992948 7358.147941817847 6740.060515407685 6220.859283385992 6698.278541360024 6842.3255637128195 6765.533257571102 6914.142579525831 1.0293432676185357 0.9547494724924332 0.9522870247808752 0.8391692627476675 1.0642169809466766 0.9748223207554848 0.8997296789636953 0.9687793481718147 0.9896130264907067 0.9785064713020539 1.0 12.755334639007833 -8.729036103227347 3.809398514154213 0.9953630339150493 0.9573651510124302 0.048568023553483886 0.05607113137456111 0.42353818818794475 12.933097306993949 0.009408898676613493 0.010403599939435716 1.866224543734239e-09 8.729036103227347 -0.03799788290261907 DSLIT(ph)PHVS(ph)R ddPTM_A549_MK2206_60min_R1 3 DSLITPHVSR 10 0 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 DS(0.004)LIT(0.996)PHVS(1)R;DS(0.002)LIT(0.998)PHVS(1)R;DS(0.003)LIT(0.997)PHVS(1)R 97.779 0.00077564 30515000.0 2973.0699999999997 2879.2 2087.83 1883.1 4521.049999999999 3957.3779999999997 2783.97 3318.8900000000003 4289.91 2746.3999999999996 3526.3900000000003 True False 3474.851531417235 3025.7389819424866 2383.915688464423 2344.459584535572 3856.00953399872 4376.145113265087 3289.781312708625 3789.352821174346 3318.252234578578 2125.986332542361 2650.690039587178 1.3109233744879552 1.1414910595935688 0.8993566402941995 0.884471420468574 1.454719139699661 1.6509456209171232 1.2411037366032356 1.4295722112286298 1.2518446838451798 0.8020501457324166 1.0 11.372152262111696 -4.468642227805515 16.614967188499488 1.18047961387497 1.3417677404804613 0.0 0.2573164611627692 28647103.883299943 3852359.8636977863 0.033357950467194954 0.0 3.399051714776554e-05 4.468642227805515 0.1612881266054913 DSLIT(ph)PHVS(ph)R ddPTM_A549_PD325901_60min_R1 3 DSLITPHVSR 10 0 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 DS(0.043)LIT(0.957)PHVS(1)R;DS(0.013)LIT(0.987)PHVS(1)R;DSLIT(1)PHVS(1)R 106.26 0.00045404 33146800.0 2476.8 3056.99 2380.3 2514.8 2480.6040000000003 2066.74 1975.21 2176.55 2746.8 2637.55 3038.7 True False 2728.24291267621 3314.613275807338 2541.8414719066873 2670.1334844748117 2306.3749326592256 2049.9091546654618 2050.3776974263847 2133.1370027795574 2631.361548254305 2471.0146428729017 2664.9591639063824 1.0237466110651632 1.2437763852818937 0.9538012838368505 1.0019416134545358 0.8654447557381958 0.7692084675926664 0.7693842837054491 0.8004389079090941 0.9873928215834914 0.9272242052860613 1.0 11.379897710899398 -5.845502141656188 8.457501841061386 0.9406830653688243 1.1330601472688597 0.38740284765942556 0.10357856082689068 0.22781978481624887 20.178955462221705 0.01648313723277312 0.05163876661365598 1.4272427919200599e-06 5.845502141656188 0.19237708190003544 DSLLQDGEFSMDLR ddPTM_A549_MK2206_60min_R1 5 DSLLQDGEFSMDLR 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ;;;; 227.57 1.1506e-46 25057400.0 5978.219999999999 5476.04 5129.0199999999995 5178.25 7944.7 5826.46 5920.660000000001 6042.3 9151.400000000001 8926.9 8308.5 False True 6987.197382553768 5754.747045942046 5856.392160495732 6446.921482460475 6776.045154280452 6443.01212990887 6996.367283735617 6898.814528767675 7078.622511782855 6910.307089998688 6245.270147065429 1.1187982614069882 0.9214568642232596 0.9377323994939714 1.032288648952968 1.0849883183138886 1.0316626788252476 1.1202665567674632 1.104646294925983 1.1334373606094539 1.1064864973448347 1.0 12.608548263445222 -6.513462380502608 5.620329954809867 1.0705489245773003 0.985035282001262 0.29175168777547733 0.06012844674521072 0.18621732136790134 20.373734349498886 0.009556568342805659 0.021353196535383374 3.0657562301483884e-07 6.513462380502608 -0.08551364257603833 DSLLQDGEFSMDLR ddPTM_A549_PD325901_60min_R1 6 DSLLQDGEFSMDLR 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ;;;;; 233.59 1.7377999999999998e-47 42271400.0 14858.92 16525.1 17469.3 17885.2 17883.399999999998 16548.8 17675.7 19913.3 16405.33 19087.5 18902.6 False True 16367.386619841232 17917.72817184349 18654.87174943472 18989.928183763685 16627.33167838073 16414.032059537156 18348.358436014165 19516.113609818367 15715.871031171837 17882.31199250688 16577.70003345403 0.9873134745357689 1.0808331756326428 1.125299149567728 1.1455104233664346 1.0029938800211453 0.9901272206888415 1.1068096538715817 1.1772509799570854 0.948012752037797 1.0786968009084565 1.0 14.016956242806685 -8.79316653703643 24.999969233644432 0.9754504503294722 1.0766663141117592 0.11697271277316845 0.06813346029865697 157.4039056483714 124028.45435486347 0.010976206429815217 0.011685587280982747 1.610028126230641e-09 8.79316653703643 0.10121586378228697 DSLS(ph)DDGVDLK ddPTM_A549_MK2206_60min_R1 1 DSLSDDGVDLK 11 0 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 DSLS(1)DDGVDLK 143.31 2.6920999999999998e-11 7621300.0 2953.3 2670.7 2442.2 2249.3 3913.1 3130.6 2739.9 3272.0 4382.9 3844.8 3973.0 True False 3451.7448387473282 2806.627222517989 2788.5406830861784 2800.378600974915 3337.488173652224 3461.878014075905 3237.7043641599444 3735.816020079746 3390.1801480530926 2976.257009670429 2986.3944507782326 1.1558234840169317 0.9398045933907366 0.9337482804254157 0.9377122302933415 1.1175644171125816 1.1592165975173725 1.084151614103161 1.2509452725195829 1.1352084273963328 0.9966054580950745 1.0 11.544189017648844 -6.768050692544537 24.999155466576795 1.0916095970713948 0.9839156139535504 0.2684013993260077 0.08850086239929876 180.0122405705807 680677.2318377645 0.013714504499640016 0.02634488688060085 1.7058832600392138e-07 6.768050692544537 -0.1076939831178444 DSLS(ph)DDGVDLK ddPTM_A549_PD325901_60min_R1 2 DSLSDDGVDLK 11 0 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 DSLS(1)DDGVDLK;DS(0.004)LS(0.996)DDGVDLK 174.29 2.8884e-15 31756000.0 12070.7 12810.400000000001 12496.099999999999 12360.8 13628.8 12260.1 12000.5 12275.900000000001 12125.8 13046.4 14298.3 True False 13296.108578020325 13889.977366102705 13344.160491153696 13124.29854258639 12671.56010480756 12160.257810423207 12457.18559442557 12031.047544242749 11616.194794605375 12222.648077487447 12539.699744391552 1.0603211280211937 1.107680219561483 1.0641531107730027 1.0466198401964373 1.0105154320361605 0.9697407480479705 0.9934197666891595 0.959436652350763 0.9263535037831174 0.974716167582409 1.0 13.614215183633313 -6.792019870643905 1.1697502209491146 0.9652219693445865 1.0848762054140926 0.8324458475817009 0.021068396744117184 0.17800254004325952 0.47738036856488797 0.004558933000627689 0.013213173402964386 1.6142846953994776e-07 6.792019870643905 0.11965423606950609 DSLS(ph)PVLHPSDLILTR ddPTM_A549_MK2206_60min_R1 2 DSLSPVLHPSDLILTR 16 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 DS(0.061)LS(0.939)PVLHPSDLILTR;DS(0.048)LS(0.952)PVLHPSDLILTR 106.75 2.3899e-07 9257600.0 479.12 785.83 839.96 560.01 837.25 957.4000000000001 495.96000000000004 668.78 1244.3600000000001 986.6500000000001 1162.51 True False 559.9837426406456 825.8253904486884 959.0789583838618 697.212475139804 714.0916340983688 1058.711432529315 586.0695121897755 763.5816130528516 962.5144468345954 763.7650797418148 873.8266833562055 0.6408407448601275 0.9450677190090452 1.097561995589581 0.7978841667571203 0.8172005361013649 1.211580571633498 0.6706930829106656 0.8738364570421183 1.1014935400436123 0.8740464147974234 1.0 9.771203350670046 -8.75305777537694 24.946968073425275 1.0479275059199966 0.8901327813768584 0.050432226405601965 0.1676493144636172 226.99107927712808 675614.4463998814 0.02596587174174699 0.029205206587822236 1.7658028954949981e-09 8.75305777537694 -0.15779472454313825 DSLS(ph)PVLHPSDLILTR ddPTM_A549_PD325901_60min_R1 2 DSLSPVLHPSDLILTR 16 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 DS(0.071)LS(0.929)PVLHPSDLILTR;DS(0.043)LS(0.957)PVLHPSDLILTR 100.02 4.6548e-07 13162600.0 699.47 800.93 1000.95 697.05 929.6500000000001 711.9200000000001 736.1800000000001 1016.0999999999999 945.31 958.77 1093.23 True False 770.4796794774018 868.4271819640791 1068.8804862013183 740.1051953845907 864.3545911183927 706.1223595563238 764.1957327531538 995.8330883849709 905.581908104076 898.2330985752882 958.7696405559528 0.8036129294108967 0.9057725080453238 1.1148459869687952 0.7719322390678045 0.9015247819248714 0.7364880255771044 0.79705875157877 1.0386573022978975 0.9445250139324026 0.9368601805689614 1.0 9.905040416541476 -8.264115759514755 24.87130957165615 0.9779355533277664 0.8663180470921901 0.2509003010088249 0.09818027608991044 256.40662967748267 2382755.1490070643 0.016011376698187373 0.019805862218434316 5.443575371067499e-09 8.264115759514755 -0.11161750623557631 DSNAPKS(ph)PLTGYVR ddPTM_A549_MK2206_60min_R1 3 DSNAPKSPLTGYVR 14 1 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 DS(0.131)NAPKS(0.782)PLT(0.087)GYVR;DS(0.001)NAPKS(0.988)PLT(0.011)GYVR;DSNAPKS(0.766)PLT(0.233)GYVR 119.08 7.6306e-07 274417000.0 11218.1 11488.7 10883.600000000002 9988.7 13462.1 10781.300000000001 10738.3 10104.2 15221.4 15286.900000000001 15583.5 True False 13111.441023787416 12073.425757794743 12427.058135466688 12435.931948409785 11481.842923136039 11922.170009952271 12689.310111193381 11536.501292814723 11773.777203581038 11833.57867278685 11713.686867279786 1.119326576879225 1.0307109874620113 1.0609006605921476 1.0616582199364974 0.9802074319750372 1.017798251313585 1.0832891688985502 0.9848736289032959 1.0051299251023265 1.0102351895577781 1.0 13.515907613200286 -2.0000000000285163 0.30003493670287373 1.0012030916384806 1.8342282476557674 0.45806262193670555 0.030833823372594864 29.129920040041082 0.3642421849223504 0.009695197131325533 13.246740652556838 0.009999999999343388 2.0000000000285163 0.8330251560172868 DSNAPKS(ph)PLTGYVR ddPTM_A549_PD325901_60min_R1 4 DSNAPKSPLTGYVR 14 1 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 DS(0.001)NAPKS(0.987)PLT(0.012)GYVR;DSNAPKS(0.987)PLT(0.013)GYVR;DSNAPKS(0.994)PLT(0.006)GYVR;DSNAPKS(1)PLTGYVR 169.02 1.4383000000000001e-22 533995000.0 31138.699999999997 29794.1 30615.300000000003 32035.7 36731.0 33657.0 33809.3 31387.5 37352.299999999996 37329.6 36176.8 True False 34299.8779009006 32304.95336940303 32693.03836275459 34014.47243064646 34151.1412750709 33382.908550942804 35095.93141265883 30761.451689482587 35782.51272712218 34972.602685290614 31727.282943629976 1.0810846287039886 1.018207371453755 1.0304392727495915 1.0720890437129504 1.0763966563335223 1.0521830252610784 1.106175132456629 0.9695583370355606 1.1278152242250667 1.102287981842839 1.0 14.953436356790148 -11.213256667989269 1.6658138414395964 0.99998640812179 1.0679081186031336 0.0 0.05130054619707591 0.4418394247058739 2.2077676575868512 0.03228914131097152 0.006697944314546008 6.119885996331826e-12 11.213256667989269 0.06792171048134366 DSNELSDS(ph)AGEEDSADLKR ddPTM_A549_MK2206_60min_R1 1 DSNELSDSAGEEDSADLKR 19 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 DSNELS(0.028)DS(0.972)AGEEDSADLKR 88.22200000000001 2.6455e-06 4014600.0 805.13 893.77 958.51 803.62 1167.5 746.18 600.53 771.83 1048.1 1168.7 995.53 True False 941.0162604613945 939.2590753996723 1094.4411310068515 1000.5069360758721 995.7622965778985 825.1402723258034 709.6385276137711 881.2392661302412 810.7070234717754 904.6898583025986 748.3124257697599 1.2575178869887236 1.2551696898972284 1.462545713952354 1.3370176701886107 1.3306772175453274 1.1026681422228337 0.9483185140000763 1.177635484568821 1.08338041111349 1.2089734543322321 1.0 9.547496921121622 -7.3171231938129075 3.929099759245125 1.0461458413441198 1.333876563012943 0.6384035128179195 0.08845354605486255 0.08230951409858372 2.6180664406916585 0.01145523547886562 0.018994292430119932 4.818111056589956e-08 7.3171231938129075 0.2877307216688232 DSNPYAT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 DSNPYATLPR 10 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2R8Y4Z5 Q3V6T2 CCDC88A Girdin 1 DSNPYAT(1)LPR;DSNPYAT(1)LPR 82.85 0.00093356 22856000.0 5273.4 6017.9 5267.7 4755.5 6840.8 5809.3 5024.9 5807.1 7247.6 7656.1 6595.1 True False 6163.420997748333 6324.185405470854 6014.739069811265 5920.597713482509 5834.527381952963 6424.036270098752 5937.859286640866 6630.274208497885 5606.030172038967 5926.5816926076195 4957.354654499755 1.2432882912974241 1.275717766073169 1.21329610024002 1.194305859902201 1.1769437106253846 1.2958597312112217 1.1977878728630227 1.3374621487852665 1.1308511419392626 1.1955129510913858 1.0 12.27535475912199 -9.443136361711876 1.0154748444139223 1.02647973018351 1.238092571822853 0.27221587343199005 0.07316130090817023 0.1630495613252045 0.3531851143338184 0.014828595221035738 0.011085472994675183 3.60465444708712e-10 9.443136361711876 0.21161284163934302 DSNPYAT(ph)LPR ddPTM_A549_PD325901_60min_R1 1 DSNPYATLPR 10 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2R8Y4Z5 Q3V6T2 CCDC88A Girdin 1 DSNPYAT(1)LPR 117.2 1.3766e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DSPAFPDS(ph)PWR ddPTM_A549_MK2206_60min_R1 2 DSPAFPDSPWR 11 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 DSPAFPDS(1)PWR;DSPAFPDS(1)PWR 138.99 1.4521e-08 5053900.0 3381.7 2982.3 2478.4 2290.2 5419.8 3633.7999999999997 3464.9 3511.6000000000004 6140.0 5333.200000000001 4811.5 True False 3952.4482853729173 3134.0863315667793 2829.874387421501 2851.2991028109836 4622.554599565646 4018.3263040787783 4094.4274796079417 4009.38005382397 4749.299803565218 4128.4264159317345 3616.671759355519 1.0928413050337842 0.8665664290544478 0.782452645889484 0.7883765219874632 1.2781238959847914 1.111056399764305 1.1320981698205195 1.1085827856654678 1.3131686035039936 1.141498784138323 1.0 11.820446952979646 -6.756297953823397 24.998302056781476 1.1515068474999575 0.8742663937567576 0.586807867805722 0.10984184462735755 84.93062621718452 412939.0811655716 0.01944569720119776 0.039532778381563334 1.7526776401799913e-07 6.756297953823397 -0.27724045374319983 DSPAFPDS(ph)PWR ddPTM_A549_PD325901_60min_R1 2 DSPAFPDSPWR 11 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 DSPAFPDS(1)PWR;DSPAFPDS(1)PWR 132.17 7.76e-08 7947700.0 4503.799999999999 3864.2 3958.7 3716.5 3753.2999999999997 3720.0 3935.7 3459.0 4522.5 4251.1 5108.799999999999 True False 4961.022460477674 4189.849695411077 4227.36118759694 3946.059764216098 3489.68115618207 3689.705553362071 4085.4752171976775 3390.0075314669925 4332.435052417393 3982.6848205027377 4480.449987351474 1.1072598677549976 0.9351403781404154 0.943512638134782 0.8807284481148131 0.7788684542922268 0.8235122730480838 0.9118448434267028 0.7566221118497354 0.9669642702514404 0.8889028628253967 1.0 12.129427919159006 -8.97458388424111 24.874199442144914 0.9854255090052289 0.887801879434398 0.045527674253381334 0.09384287705977885 198.89358999703137 194654.83557371233 0.015837002573913118 0.016454543212363514 1.0602691269719068e-09 8.97458388424111 -0.09762362957083082 DSPAFPDS(ph)PWRER ddPTM_A549_MK2206_60min_R1 4 DSPAFPDSPWRER 13 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 DSPAFPDS(1)PWRER;DS(0.001)PAFPDS(0.999)PWRER;DSPAFPDS(1)PWRER;DSPAFPDS(1)PWRER 116.86 4.5099e-06 73517200.0 3077.8599999999997 3043.14 2078.3 1931.48 4783.63 3568.69 3261.46 2854.47 4879.9400000000005 4557.18 4467.49 True False 3597.327521547711 3198.0228276981293 2373.03419116289 2404.692686707431 4079.9643638363436 3946.3264070952987 3854.0250649779546 3259.0998639477493 3774.6413816628765 3527.7098729010336 3358.0889365485136 1.0712424803272453 0.952334166284797 0.7066621033574901 0.7160896367381517 1.2149661432224552 1.1751703071781603 1.147684036307618 0.9705222004326942 1.124044494647155 1.0505111507043225 1.0 11.713424724174196 -6.762045045897228 24.999998226019933 1.077907795731877 0.8569986819230223 0.479162686257261 0.11717896623136784 12.288274516860168 507260.33393322915 0.017917218621388335 0.03537156368513024 1.7296369484874534e-07 6.762045045897228 -0.2209091138088547 DSPAFPDS(ph)PWRER ddPTM_A549_PD325901_60min_R1 2 DSPAFPDSPWRER 13 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 DSPAFPDS(1)PWRER;DSPAFPDS(1)PWRER 118.2 3.9229e-06 142481000.0 2659.3999999999996 2857.0 2993.2 2473.5 2520.2 2813.4 2602.3 2523.9 3835.6 3343.8999999999996 3834.8 True False 2929.3803302531933 3097.7694166423703 3196.3365515737883 2626.2824772739186 2343.189846218008 2790.4886031797964 2701.331950533199 2473.558834538754 3674.403070658298 3132.7655833264566 3363.1439108000777 0.8710243771746021 0.9210933277920373 0.9504013614491428 0.7809010101649612 0.6967260124353623 0.8297261958427319 0.8032162827937278 0.7354900355573262 1.09255005676643 0.9314991170214851 1.0 11.715594798571324 -8.767961064720671 24.999811192885783 1.0437042036404456 0.8249266637315112 0.49829786681340593 0.08026654304678718 74.7361009828551 286487.7552015591 0.014142610350400774 0.015229156017071472 1.7062353492061e-09 8.767961064720671 -0.21877753990893434 DSPDS(ph)PEPPNKKPLVEMDETPQVEK ddPTM_A549_PD325901_60min_R1 2 DSPDSPEPPNKKPLVEMDETPQVEK 25 2 H0YH12;Q9NVM9-2;Q9NVM9 H0YH12 ASUN Protein asunder homolog 1 DS(0.31)PDS(0.69)PEPPNKKPLVEMDETPQVEK;DS(0.01)PDS(0.99)PEPPNKKPLVEMDETPQVEK 119.61 1.1695e-17 14775900.0 5156.9 5042.2 5024.9 5084.1 6282.4 5466.9 5600.4 5508.6 5160.1 5926.7 6531.799999999999 True False 5680.424691690865 5467.123889602441 5365.919931178383 5398.133310171147 5841.145897103411 5422.379378944918 5813.526286656467 5398.726651586902 4943.238941731117 5552.487150543053 5728.430008491693 0.9916198126310933 0.9543843394260035 0.9367173768770967 0.9423407988173161 1.0196765760329847 0.9465733841396172 1.0148550786233976 0.9424443771825708 0.8629308439491052 0.9692860246720608 1.0 12.483924078212866 -8.502438664267297 24.46403918095721 0.933557884989365 0.9705533598884252 0.08680587439826515 0.04076101125749577 1123.215637801028 1344339.958228053 0.00891045997859793 0.010705636773715136 3.144570498929741e-09 8.502438664267297 0.03699547489906019 DSPFLAEHKYPT(ph)LPGK ddPTM_A549_MK2206_60min_R1 2 DSPFLAEHKYPTLPGK 16 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 DSPFLAEHKY(0.005)PT(0.995)LPGK;DSPFLAEHKY(0.001)PT(0.999)LPGK 85.97399999999999 2.7545e-05 4371300.0 1448.54 1417.9299999999998 1519.3000000000002 1837.6 1778.8 1589.81 1614.1599999999999 1345.66 2423.9 2256.1 2155.8 True False 1693.0181385971812 1490.0965805312965 1734.759585542885 2287.8120824929983 1517.1408763621107 1758.0426389695306 1907.4319779745317 1536.4114259109133 1874.89052017292 1746.4454430705 1620.4553629468214 1.0447792499007214 0.9195542281532114 1.0705383346000963 1.4118328309473327 0.936243546754147 1.084906551065069 1.1770962789779282 0.9481356049924924 1.1570146040699354 1.0777497998430292 1.0 10.662183565396704 -5.902718424078633 8.232043621653858 1.0883454424692658 0.9835418191174653 0.10648722171635039 0.1264286470330779 0.4363695587878087 32.81696535068765 0.017046637266789188 0.05338329219140578 1.251069901646334e-06 5.902718424078633 -0.10480362335180049 DSPFLAEHKYPT(ph)LPGK ddPTM_A549_PD325901_60min_R1 1 DSPFLAEHKYPTLPGK 16 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 DSPFLAEHKYPT(1)LPGK 83.213 9.445e-05 1542000.0 818.41 669.05 647.36 774.19 946.23 1015.6 946.56 1006.2 1027.6 805.46 943.04 True False 901.4943807184012 725.4331915311794 691.293742491918 822.0099579869398 879.7700691162873 1007.3292903211074 982.5818587775065 986.1305516513708 984.4135455752601 754.6031181393366 827.0520584231 1.0900092340465688 0.8771312327235212 0.8358527561251394 0.9939035271301134 1.0637420705943255 1.2179756764546759 1.188053217171054 1.1923439904515538 1.1902679348289074 0.9124009915144904 1.0 9.69183433182555 -6.729098419320994 2.942544815567438 1.1169619351977131 0.9281272938554421 0.3600991721318162 0.10494181184052843 0.20005008642529828 3.5435566309993063 0.01511649394034503 0.03275290262949543 1.8659567819156008e-07 6.729098419320994 -0.18883464134227101 DSPPT(ph)PTMYK ddPTM_A549_MK2206_60min_R1 4 DSPPTPTMYK 10 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 DS(0.005)PPT(0.904)PT(0.091)MYK;DSPPT(0.888)PT(0.112)MYK;DS(0.001)PPT(0.884)PT(0.116)MYK;DS(0.001)PPT(0.906)PT(0.093)MYK 98.73700000000001 0.00023057 96694000.0 54514.0 61586.0 48563.0 49049.0 65969.0 57934.0 49905.0 54075.0 70026.0 65608.0 67387.0 True False 63714.63046066156 64720.46434492564 55449.96363635824 61066.00720189329 56265.047488605866 64064.53742652317 58972.09251921681 61740.296847742124 54165.222808543695 50787.107233265044 50652.94811341382 1.2578661822013233 1.2777235433565315 1.0947035799812426 1.2055765651618984 1.110795118235297 1.2647741111352553 1.1642381088495801 1.2188885177917645 1.0693399856463588 1.0026485945013672 1.0 15.62835861905614 -8.9318406838778 2.1985789066454293 1.0258291559512769 1.1975926430848407 0.6419626732578423 0.05830631341806463 0.1327522238455373 1.2672822978481326 0.010969663133713519 0.01121979208264275 1.1699284876226864e-09 8.9318406838778 0.17176348713356382 DSPPT(ph)PTMYK ddPTM_A549_PD325901_60min_R1 6 DSPPTPTMYK 10 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 DS(0.007)PPT(0.857)PT(0.135)MYK;DSPPT(0.5)PT(0.5)MYK;DSPPT(0.913)PT(0.087)MYK;DSPPT(0.915)PT(0.084)MYK;DS(0.02)PPT(0.834)PT(0.138)MY(0.008)K;DSPPT(0.991)PT(0.008)MYK 104.82 0.00015843 128001000.0 60078.700000000004 63013.7 60124.299999999996 63161.1 71661.1 60954.8 62570.200000000004 66428.2 70184.0 72123.2 79570.0 True False 66177.84539639858 68324.08564559936 64204.69655478682 67062.41769773424 66627.87155337415 60458.40431829957 64951.34320072722 65103.237439085286 67234.41055143441 67569.32884337776 69783.39443578859 0.9483322777783808 0.979088022272519 0.9200569429717979 0.9610082490246578 0.9547811781308803 0.8663723627535854 0.9307564317538666 0.9329330848041539 0.9634729163726818 0.9682723144909767 1.0 16.09059615502058 -9.432505495887218 1.034997317640226 0.9921413303504121 0.9368166180203442 0.27453816670973685 0.028716313566362266 0.32895311233850877 0.7393055620124789 0.007830559406680078 0.005922085421251657 3.6939796969049377e-10 9.432505495887218 -0.05532471233006786 DSPQS(ph)LTDESCSEK ddPTM_A549_MK2206_60min_R1 2 DSPQSLTDESCSEK 14 0 Q9BV36;Q9BV36-4;Q9BV36-2 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 DS(0.029)PQS(0.936)LT(0.034)DESCSEK;DSPQS(0.998)LT(0.002)DESCSEK 94.728 5.2703e-05 2794000.0 983.1099999999999 1162.01 777.5600000000001 873.1800000000001 1516.22 914.3 620.82 908.33 1272.88 1295.76 1607.33 True False 1149.0349332681694 1221.151345653997 887.8297000820934 1087.1091391985392 1293.1860465244883 1011.0506191367796 733.614957975757 1037.0885591439592 984.5747123716764 1003.0469160555966 1208.185600948748 0.9510417375988179 1.0107315835373865 0.7348454570100076 0.8997865380491776 1.0703537978841928 0.8368338592537728 0.6072038579169239 0.8583851341462503 0.814920084793696 0.8302092950519665 1.0 10.238626382537227 -3.019675220563278 16.638297673197734 0.8910918772099096 0.883225706963494 0.0 0.12810042341823283 0.0 0.0 0.01752680516933879 0.0 0.00095570702742138 3.019675220563278 -0.00786617024641556 DSPQS(ph)LTDESCSEK ddPTM_A549_PD325901_60min_R1 2 DSPQSLTDESCSEK 14 0 Q9BV36;Q9BV36-4;Q9BV36-2 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 DSPQS(0.998)LT(0.002)DESCSEK;DS(0.003)PQS(0.991)LT(0.006)DESCSEK 92.935 5.9465e-05 2493400.0 1131.1 1281.23 1454.19 1557.72 1163.63 1276.8200000000002 1384.35 1559.72 1129.83 1397.99 1895.15 True False 1245.928439328189 1389.2037485770754 1552.8800781548473 1653.9368265611986 1081.9006431055725 1266.422001248322 1437.032196795387 1528.6101610233309 1082.3471741896608 1309.7206728175338 1662.0585643456682 0.7496296857738557 0.8358332121251021 0.9343112881020512 0.9951134466867195 0.6509401451395327 0.7619599142987459 0.8646098444558293 0.9197089644221567 0.65120880660169 0.7880111452830512 1.0 10.698755502511919 -11.150258382289188 1.5411341972995776 0.9996827758658194 0.8001779501625582 0.0 0.12256475938779803 0.4231053614200883 1.806438342328233 0.08490596366118887 0.01824032832268268 7.0752471928491635e-12 11.150258382289188 -0.19950482570326122 DSPSKSS(ph)AEAQTPEDTPNK ddPTM_A549_MK2206_60min_R1 4 DSPSKSSAEAQTPEDTPNK 19 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DSPS(0.024)KS(0.054)S(0.921)AEAQTPEDTPNK;DS(0.006)PS(0.086)KS(0.227)S(0.681)AEAQTPEDTPNK;DSPS(0.009)KS(0.102)S(0.889)AEAQTPEDTPNK;DS(0.02)PS(0.1)KS(0.179)S(0.7)AEAQTPEDTPNK 251.51 1.2619999999999997e-97 741683000.0 42576.1 44603.6 48401.0 42505.1 61579.0 50895.1 45965.9 46696.8 65698.8 66886.9 65485.8 True False 49761.90479429454 46873.7327226208 55264.98960038253 52918.85140812645 52520.810673208056 56280.78570056687 54317.30903775306 53316.21440295229 50818.12669942511 51777.10283503045 49223.86854386441 1.0109303934523284 0.9522561738692001 1.1227274741954658 1.075064861287149 1.0669785253957778 1.1433637250679292 1.103475014145826 1.0831374286529534 1.0323879086045427 1.0518698421456005 1.0 15.58707042437783 -9.058825741438284 2.1206564986550607 1.011642477351906 1.0710182395571288 0.0961687173243645 0.051278223297680135 0.3501702327883001 3.214589147667943 0.010397609018092209 0.010168454906812932 8.733217142127841e-10 9.058825741438284 0.05937576220522289 DSPSKSS(ph)AEAQTPEDTPNK ddPTM_A549_PD325901_60min_R1 2 DSPSKSSAEAQTPEDTPNK 19 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DSPS(0.004)KS(0.111)S(0.885)AEAQTPEDTPNK;DSPS(0.003)KS(0.114)S(0.883)AEAQTPEDTPNK 262.06 3.155699999999999e-111 1136730000.0 68717.0 68971.0 67786.0 64607.0 79669.0 63980.0 73095.0 76220.0 74846.0 71276.0 76018.0 True False 75693.09925321837 74783.42822374558 72386.36559033184 68597.62765685702 74073.32428312945 63458.968092501374 75876.67022411866 74699.73230656667 71700.48290397617 66775.6211959617 66668.26791780548 1.135369218629461 1.121724480917146 1.0857694050125337 1.0289397009898356 1.1110731776390768 0.9518616588440423 1.1381227170573278 1.1204690723128294 1.0754814118221108 1.0016102604958717 1.0 16.024712625055674 -14.999999999999913 0.19563017112442357 0.608941918448811 1.0984166798732413 0.28158239447561195 0.05194959033962764 47.860219015143976 0.5567829074112446 7.133268475518711 0.04715847131847557 1.0000000000002004e-15 14.999999999999913 0.48947476142443036 DSPSKSS(ph)AEAQTPEDTPNKSGAEAK ddPTM_A549_MK2206_60min_R1 2 DSPSKSSAEAQTPEDTPNKSGAEAK 25 2 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DSPS(0.045)KS(0.169)S(0.786)AEAQTPEDTPNKSGAEAK;DS(0.004)PS(0.032)KS(0.146)S(0.819)AEAQTPEDTPNKSGAEAK 191.11 3.8876999999999994e-58 68705000.0 5477.6 6695.0 7748.0 5509.1 10292.6 6599.8 6519.5 5112.0 11992.8 11520.3 12911.5 True False 6402.084965537659 7035.746903342922 8846.782905802842 6858.8297473129 8778.57217452477 7298.186455407326 7704.008760225102 5836.641654843419 9276.449948566276 8917.856228804161 9705.21821072821 0.659653892012521 0.7249447411255074 0.911549097991795 0.7067156655716516 0.9045208447576049 0.7519858180354837 0.7938006743330142 0.6013921096994561 0.9558208529831952 0.9188723051014254 1.0 13.244544935313169 -8.901492447556201 8.91796179839119 0.9805710905829242 0.7653496192078797 0.494157840934078 0.08998441900306119 0.13967962465535563 11.469532244451685 0.014600576290739773 0.015517213215576803 1.2546065554575896e-09 8.901492447556201 -0.21522147137504455 DSPSKSS(ph)AEAQTPEDTPNKSGAEAK ddPTM_A549_PD325901_60min_R1 2 DSPSKSSAEAQTPEDTPNKSGAEAK 25 2 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 DS(0.001)PS(0.026)KS(0.145)S(0.829)AEAQTPEDTPNKSGAEAK;DSPS(0.007)KS(0.03)S(0.963)AEAQTPEDTPNKSGAEAK 198.7 1.3510999999999997e-68 132491000.0 6861.2 6272.6 8053.700000000001 6753.599999999999 7773.200000000001 12286.1 9543.1 9513.1 10024.900000000001 10476.5 8299.0 True False 7557.743973051515 6801.214015691611 8600.272512832364 7170.754533461542 7227.237248084213 12186.04607504347 9906.267892684697 9323.353757617422 9603.588315528825 9815.012002069323 7278.275611695478 1.0383976062828617 0.9344540353435812 1.18163600441464 0.9852271219214124 0.9929875747588823 1.6743040144648664 1.3610734769052015 1.2809838834126732 1.3194867614104633 1.3485353572345566 1.0 12.829380968446452 -5.773296810834503 22.72120744325108 1.1912329565741908 0.9864258873352384 0.16156863771215235 0.19891882562712523 104.86808141930463 200954.3804805511 0.029946938073698765 0.09445807527135243 1.6854007745267036e-06 5.773296810834503 -0.20480706923895242 DSPSVWAAVPGK ddPTM_A549_MK2206_60min_R1 2 DSPSVWAAVPGK 12 0 P07737;CON__P02584;I3L3D5 P07737 PFN1 Profilin-1 0 ; 147.95 1.4954e-11 12337800.0 11079.900000000001 11813.0 9521.2 8939.4 14603.2 11636.400000000001 10255.7 10789.7 15861.7 14278.3 15827.0 False True 12949.91624245303 12414.231242597454 10871.449329211426 11129.55340130491 12455.088624742062 12867.756124382817 12119.027938068957 12319.173017070416 12269.050275930038 11052.822113289983 11896.719097021678 1.0885283696153687 1.0435004089241153 0.9138191160563818 0.9355145154340219 1.046934749250335 1.0816222539543896 1.018686567215236 1.0355101197736525 1.031296963126714 0.929064729792354 1.0 13.538276138369879 -5.521747598688013 24.999603934478557 1.0118579857551075 1.0772714108452568 0.18546539329408618 0.051911952448059705 43.439679220872996 960009.1495037159 0.006524613129285694 0.02600268810568517 3.007823868293722e-06 5.521747598688013 0.06541342509014925 DSPSVWAAVPGK ddPTM_A549_PD325901_60min_R1 2 DSPSVWAAVPGK 12 0 P07737;CON__P02584;I3L3D5 P07737 PFN1 Profilin-1 0 ; 159.4 1.789e-13 21209300.0 14825.400000000001 12964.7 13446.3 13310.5 14778.4 13633.2 13430.900000000001 14037.099999999999 17204.6 15260.0 18000.1 False True 16330.463694117356 14057.280768618606 14358.84677717047 14132.659354661204 13740.41616671225 13522.17573927306 13942.020249170495 13757.119028608071 16481.55049260812 14296.480995712103 15786.201812035168 1.0344770634863703 0.8904789724594514 0.9095821115262506 0.8952539390372339 0.8704067216622531 0.8565819631777387 0.8831776265866121 0.8714647888334891 1.0440478773078163 0.9056314600522006 1.0 13.94637647753086 -8.762367381515885 24.999641982603585 1.0208003913843828 0.8979916917857381 0.21973992058755376 0.05757395082686511 12.156117930432037 327474.43391131266 0.007895195232322213 0.008644903843096224 1.728353679250127e-09 8.762367381515885 -0.12280869959864471 DSQAS(ph)PGRPSSVEEVR ddPTM_A549_PD325901_60min_R1 2 DSQASPGRPSSVEEVR 16 1 H0Y713;Q86YN6-6;Q86YN6-5;Q86YN6-4;Q86YN6-2;Q86YN6-3;Q86YN6 H0Y713 PPARGC1B Peroxisome proliferator-activated receptor gamma coactivator 1-beta 1 DS(0.177)QAS(0.779)PGRPS(0.009)S(0.035)VEEVR;DS(0.039)QAS(0.892)PGRPS(0.012)S(0.056)VEEVR 61.766999999999996 0.0010681 16930500.0 1829.6 1724.48 1993.51 1605.8600000000001 1503.51 1523.98 1558.5900000000001 1679.94 2121.09 1695.81 1882.67 True False 2015.339645119667 1869.8079816630857 2128.8015765494683 1705.050325027327 1397.9086444279174 1511.5692121539591 1617.9029953431743 1646.432278812564 2031.9479635891666 1588.7362671912556 1651.1135252284287 1.220594231908341 1.1324527072748682 1.2893126632555156 1.0326669238515482 0.8466459895509117 0.9154847253430597 0.9798859803533742 0.9971647943376776 1.2306530911059252 0.9622210968028118 1.0 10.689223603370781 -3.0655199423820254 9.712372319329054 1.082176374859485 1.1839456540120898 0.0 0.13855827887732103 0.0 0.0 0.019766271443075707 0.0 0.0008599635772875457 3.0655199423820254 0.10176927915260481 DSQDASAEQS(ph)DHDDEVASLASASGGFGTK ddPTM_A549_MK2206_60min_R1 4 DSQDASAEQSDHDDEVASLASASGGFGTK 29 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 DSQDAS(0.002)AEQS(0.998)DHDDEVASLASASGGFGTK;DSQDAS(0.001)AEQS(0.999)DHDDEVASLASASGGFGTK;DSQDAS(0.001)AEQS(0.999)DHDDEVASLASASGGFGTK;DSQDAS(0.001)AEQS(0.999)DHDDEVASLASASGGFGTK 224.01 1.3964999999999998e-104 385115800.0 7355.370000000001 8704.9 8094.5 7489.299999999999 10146.599999999999 8359.11 7002.7 8159.900000000001 13745.4 12603.0 13698.599999999999 True False 8596.776634468872 9147.94222836592 9242.4218160843 9324.178836207448 8654.048581119741 9243.665471871855 8274.999945582998 9316.590813645698 10632.088846893377 9755.973546836361 10296.859557873318 0.8348930648369864 0.888420607948479 0.8975961810625298 0.9055361767149551 0.840455143869819 0.8977169611684024 0.8036430815700172 0.9047992508086532 1.032556459290904 0.947470779027633 1.0 13.32991677607232 -8.664513474805586 4.654481643836086 1.0153114234179648 0.869674698354185 0.6796051174071291 0.0369350053829373 0.059488011646284665 2.2401000902939616 0.005206082562400831 0.005881290642224775 2.1651427006289884e-09 8.664513474805586 -0.14563672506377978 DSQDASAEQS(ph)DHDDEVASLASASGGFGTK ddPTM_A549_PD325901_60min_R1 2 DSQDASAEQSDHDDEVASLASASGGFGTK 29 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 DSQDAS(0.001)AEQS(0.999)DHDDEVASLASASGGFGTK;DSQDASAEQS(1)DHDDEVASLASASGGFGTK 260.49 2.4103999999999995e-139 763530000.0 20613.5 18858.7 20108.2 22259.2 25188.0 23620.7 20733.8 25197.0 22875.5 23264.7 27297.0 True False 22706.16734514334 20447.9888336134 21472.863372429547 23634.100229688942 23418.88177388272 23428.340850618133 21522.836104970702 24694.4260683359 21914.122286694103 21795.76287162145 23939.642049939936 0.9484756412721849 0.8541476430999813 0.8969584143169519 0.9872369929502868 0.9782469480967648 0.978642069991891 0.8990458612569231 1.0315286259009815 0.915390557677494 0.9104464814533906 1.0 14.547113960542758 -9.437289113258153 0.00830239329475286 1.9175065864403966 2.5272089706351234e-06 0.02578642560115285 0.050929882650558915 3009.1391075952347 12.177647212815819 1427.942099474751 1383.7409067191268 3.653514932718389e-10 9.437289113258153 -1.917504059231426 DSQQTEFTQNAATGLNIS(ph)RDETVLQEEAR ddPTM_A549_PD325901_60min_R1 2 DSQQTEFTQNAATGLNISRDETVLQEEAR 29 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 DSQQTEFT(0.015)QNAAT(0.185)GLNIS(0.797)RDET(0.003)VLQEEAR;DSQQTEFTQNAATGLNIS(1)RDETVLQEEAR 190.48 2.4676999999999994e-67 15834100.0 3405.0 2977.7 2787.3 3288.1000000000004 3249.4 3240.6 3006.2 3565.3 3124.6 3823.0 3961.1 True False 3750.673093371485 3228.6412292390582 2976.462939396506 3491.1984691830894 3021.1733538214426 3214.2096280175074 3120.6025860557597 3494.1872945762575 2993.2839280891926 3581.6151275627394 3473.909811481743 1.0796691039516921 0.9293969632049632 0.8568048973404239 1.0049767146067539 0.8696752413767493 0.9252426811410327 0.898296949374375 1.0058370781611816 0.861646988703041 1.0310040622600551 1.0 11.762344584416491 -5.261201456775457 22.782593869513846 0.9303307925086979 1.079669221583496 0.29900202722197655 0.06113893637186112 4.841049808313227 462472.99416951387 0.008040258244477816 0.0646369926914469 5.480226939141446e-06 5.261201456775457 0.1493384290747981 DSRVS(ph)TSSQESK ddPTM_A549_MK2206_60min_R1 1 DSRVSTSSQESK 12 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;G3V3R9;G3V3Y4;A0A3B3IT62;G3V572 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 DS(0.178)RVS(0.814)T(0.007)S(0.001)SQESK 71.98 0.00061045 13708000.0 2090.0 2347.5 2104.2 1539.4 1639.8 1681.1 1236.4 1279.3 2121.6 2216.7 2520.8 True False 2442.74090440589 2466.9777230168065 2402.607200618269 1916.5530691062927 1398.587592229924 1858.9928861761332 1461.0378757791734 1460.6446926919366 1641.0609874990178 1715.9459304349891 1894.815789459294 1.2891706507802283 1.3019617720838104 1.267989856314148 1.0114719751481498 0.7381126967645895 0.9810942554508778 0.7710711953672796 0.7708636907172635 0.8660794345435089 0.9056003966088191 1.0 10.887841883690923 -6.3372458078207705 3.37509886349213 0.9011954988030244 1.29338754305591 0.8208658143191349 0.08528127447257511 0.08987158541198345 1.983703119578799 0.013928615533220622 0.0357506533911117 4.599961450947841e-07 6.3372458078207705 0.3921920442528857 DSRVS(ph)TSSQESK ddPTM_A549_PD325901_60min_R1 1 DSRVSTSSQESK 12 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;G3V3R9;G3V3Y4;A0A3B3IT62;G3V572 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 DS(0.177)RVS(0.772)T(0.042)S(0.008)S(0.002)QESK 63.681999999999995 0.0019184999999999998 7631800.0 1783.0 2138.8 2209.9 2465.2 2388.2 2618.2 2133.0 2699.5 3375.1 3282.4 3482.6 True False 1964.0088474247732 2319.044182119253 2359.8771032082464 2617.469805124584 2220.46107084273 2596.878247261444 2214.1724822223873 2645.6563547832166 3233.2562842264088 3075.1487038221135 3054.262278020328 0.6430387008864802 0.7592812833423006 0.7726504433462869 0.8569892061860326 0.7270040581720963 0.8502472973423405 0.724945103161717 0.8662178012092805 1.058604661261147 1.0068384519404547 1.0 11.576608240363392 -8.589274485226504 3.7269690744968993 1.0274526755324782 0.768831142282682 0.793212005324245 0.05786173912457086 0.06772050587020242 1.9071815028569008 0.00977224044707657 0.011188678687677586 2.574693370556774e-09 8.589274485226504 -0.2586215332497962 DSS(ph)FER ddPTM_A549_MK2206_60min_R1 4 DSSFER 6 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DS(0.103)S(0.897)FER;DS(0.081)S(0.919)FER;DS(0.004)S(0.996)FER;DS(0.025)S(0.975)FER 110.31 0.023953 102455000.0 13374.099999999999 14192.300000000001 11926.2 11888.5 18090.9 14758.699999999999 13970.9 13707.400000000001 18161.2 18562.5 19248.7 True False 15631.321114648226 14914.627449785483 13617.514492925386 14801.18303369504 15429.752574870325 16320.455837967826 16509.23168774123 15650.465927151934 14047.71719747697 14369.21835778386 14468.716552905868 1.0803529848339495 1.030818966924199 0.9411694840473236 1.0229782980109872 1.0664216496639742 1.127982276678857 1.1410294498046234 1.0816761714783005 0.9709027850611708 0.9931232189974705 1.0 13.820649332871776 -8.76429267243467 24.99874222596735 0.9862596454866254 1.0602562674580465 0.289398756899523 0.05127592933444438 76.34904680666135 668920.5930135986 0.009943041119840264 0.010812646637771284 1.7207085931704427e-09 8.76429267243467 0.0739966219714211 DSS(ph)FER ddPTM_A549_PD325901_60min_R1 2 DSSFER 6 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DS(0.002)S(0.998)FER;DS(0.025)S(0.975)FER 105.25 0.028689 88392000.0 5581.1 5485.799999999999 6249.8 5227.5 6046.7 5596.1 6243.299999999999 5787.0 6228.799999999999 6119.4 6584.1 True False 6147.689163411337 5948.107618416777 6673.949011100451 5550.3908024861175 5622.0006519825565 5550.527216981044 6480.892197964848 5671.573745186323 5967.025197235477 5733.020039656662 5774.297440048708 1.0646644422528189 1.030100662491436 1.1558027760766258 0.9612235705057995 0.9736250531519438 0.9612471949374024 1.1223689574796443 0.9822101829826213 1.0333768322792085 0.9928515285503378 1.0 12.495429708867599 -6.276599106526774 24.984096707824026 1.0114689165505275 1.0781804412589087 0.31533997875938746 0.051444185856912475 779.8602994219782 1285254.002603136 0.00686130974232952 0.01600526843333381 5.289332802210505e-07 6.276599106526774 0.06671152470838115 DSS(ph)FERR ddPTM_A549_MK2206_60min_R1 2 DSSFERR 7 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DS(0.003)S(0.997)FERR;DS(0.001)S(0.999)FERR 80.219 0.012834 14654700.0 1592.76 1552.98 1591.07 1489.4 2016.87 1433.81 1251.38 1145.46 2317.0 2558.9 2784.7 True False 1861.5789487567106 1632.020048686107 1816.707650740286 1854.3030668617062 1720.1910947315323 1585.534822513951 1478.7395478749131 1307.8324628241267 1792.2031994886977 1980.8427127667674 2093.1821361898187 0.8893535429006234 0.7796837267381057 0.8679166611115867 0.8858775520782249 0.8218066956479787 0.7574758044706378 0.7064552684204709 0.6248058590853208 0.8562098675039395 0.9463307939233894 1.0 11.031482136411123 -9.805880198613732 1.1255991080922878 0.9750733241241217 0.7964406242259318 0.422139415254543 0.078206019210063 0.2903919330147892 0.7495574753995539 0.025721089912408693 0.016335522996397366 1.5635789009088254e-10 9.805880198613732 -0.17863269989818997 DSS(ph)FERR ddPTM_A549_PD325901_60min_R1 2 DSSFERR 7 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DSS(1)FERR;DS(0.053)S(0.947)FERR 93.429 0.0097657 23844000.0 1901.8999999999999 1911.4 1672.62 2288.87 2240.67 1926.67 1857.8 2112.31 2061.21 2019.44 2130.21 True False 2094.97948789522 2072.480386058883 1786.1340514811416 2430.2483014990694 2083.293069091861 1910.9798383054017 1928.4995956271675 2070.178319974862 1974.5845117508563 1891.932213760214 1868.2076745137765 1.121384692116985 1.1093415439470726 0.9560682550701995 1.3008448336085392 1.1151292747119579 1.022894758636915 1.0322726011331063 1.1081093115162644 1.0569405846514177 1.0126990909897702 1.0 10.867439122117469 -7.245522500879325 11.171241699975557 1.034481113821514 1.1208295721510728 0.21164479190508412 0.07830271855650571 0.8189593167221346 568.0550313921117 0.011306953151861343 0.019328516674784545 5.681689538562645e-08 7.245522500879325 0.08634845832955884 DSS(ph)TSPGDYVLSVSENSR ddPTM_A549_MK2206_60min_R1 2 DSSTSPGDYVLSVSENSR 18 0 P46108-2;P46108;I3L297 P46108-2 CRK Adapter molecule crk 1 DS(0.009)S(0.905)T(0.079)S(0.007)PGDYVLSVSENSR;DS(0.002)S(0.991)T(0.006)S(0.001)PGDYVLSVSENSR 241.68 1.4636999999999998e-74 108063000.0 3674.8 2853.8 2713.4 2615.7 4234.4 3042.1000000000004 2995.2 2988.3999999999996 4055.9 3871.8 4325.4 True False 4295.016399765915 2999.046230434659 3098.2009210900173 3256.546617423235 3611.52536927576 3364.013002817451 3539.3890695032164 3412.01485159117 3137.245125941397 2997.157690918115 3251.2838050330142 1.3210216816868443 0.9224190843604949 0.9529161730803004 1.0016186874803343 1.1107997904351163 1.0346722109001776 1.0886127701384336 1.0494361785056545 0.9649250308708565 0.9218382247278721 1.0 11.66679377924556 -5.252655394589229 24.941865984458946 1.0013770474924948 1.321021850192606 0.6983247701098207 0.05972787527207741 456.05010134154 1294912.3422555167 0.008072898834559179 0.13198076782773707 5.589135073570587e-06 5.252655394589229 0.3196448027001113 DSS(ph)TSPGDYVLSVSENSR ddPTM_A549_PD325901_60min_R1 1 DSSTSPGDYVLSVSENSR 18 0 P46108-2;P46108;I3L297 P46108-2 CRK Adapter molecule crk 1 DSS(0.992)T(0.008)SPGDYVLSVSENSR 241.68 1.4636999999999998e-74 83738000.0 4183.3 3249.1 3253.6 3285.1 3739.9 3228.4 3636.9 3651.7 3738.8 4758.5 4629.8 True False 4607.985536417308 3522.913059717442 3474.4088614861976 3488.0131659965828 3477.222325954579 3202.108980772608 3775.304219688042 3578.863978796769 3581.67123802723 4458.0474979093115 4060.363950720299 1.1348700738020943 0.867634798868827 0.8556890228694514 0.8590395364380619 0.8563819322988837 0.7886260984571498 0.9297945370188582 0.8814145781591542 0.8821059593418591 1.0979428327153935 1.0 11.987393333837632 -10.632545443026983 0.7973232881011466 1.0037867351444025 0.8879467232147432 0.2717697533327559 0.08877822860261825 0.890798579043865 0.9587239301105644 0.06374494944632979 0.015152844707862831 2.3305292442486605e-11 10.632545443026983 -0.11584001192965931 DSS(ph)VEVR ddPTM_A549_MK2206_60min_R1 2 DSSVEVR 7 0 O15371-2;O15371-3;O15371;B0QYA6;B0QYA5 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 1 DS(0.166)S(0.834)VEVR;DS(0.101)S(0.899)VEVR 117.4 0.0070109 313750000.0 2102.11 2162.08 2408.34 2103.69 3014.0 2278.19 1805.37 2147.2799999999997 3372.5 2627.2 2897.8 True False 2456.894776344815 2272.120637009658 2749.8788259371736 2619.0941444382333 2570.6445926216566 2519.266553659871 2133.382359912202 2451.6635157692026 2608.634134775846 2033.7136953303554 2178.196284788615 1.1279492089406657 1.0431202425956567 1.262456852553138 1.2024142005606284 1.1801712318461361 1.1565838080126722 0.9794261310657034 1.1255475610211716 1.1976120577347342 0.933668700811194 1.0 11.088918250806728 -7.559614502571666 24.969303684401673 1.0898585892194526 1.1646542434850642 0.240833357621707 0.08785287409851034 265.123854456958 180203.75739438875 0.01410069918355585 0.02091474464620739 2.756674554002334e-08 7.559614502571666 0.07479565426561163 DSS(ph)VEVR ddPTM_A549_PD325901_60min_R1 3 DSSVEVR 7 0 O15371-2;O15371-3;O15371;B0QYA6;B0QYA5 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 1 DS(0.091)S(0.909)VEVR;DS(0.095)S(0.905)VEVR;DS(0.01)S(0.99)VEVR 143.61 0.0046869 450250000.0 2348.56 2683.64 2517.96 2459.65 2816.6 2891.3 2527.1 2939.7 2729.2 2348.38 2914.2 True False 2586.984082281509 2909.799761035399 2688.8439073235127 2611.5769942295487 2618.771732742499 2867.7542114074586 2623.27017338218 2881.065377349963 2614.501215048657 2200.1028860229612 2555.7718746358555 1.0122124388156124 1.1385209258748827 1.0520672576485792 1.0218349376748048 1.0246500318482532 1.122069712037994 1.0264101422416434 1.1272779882830721 1.0229791011457816 0.8608369580467468 1.0 11.31954335333379 -8.974736045908095 20.76105718002614 1.010137497304772 1.065966956488579 0.28110794289787067 0.062425428147756756 24.782115213702014 20365.98835402937 0.007119214415576283 0.007394003974795537 1.0598977106513652e-09 8.974736045908095 0.055829459183806884 DSSASVDNRELEQHIQT(ph)SDPENFQSEER ddPTM_A549_PD325901_60min_R1 1 DSSASVDNRELEQHIQTSDPENFQSEER 28 1 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 DSSASVDNRELEQHIQT(0.49)S(0.49)DPENFQS(0.019)EER 54.583 0.0032189 1026200.0 324.8 266.94 0.0 284.5 250.91 299.41 179.87 337.13 251.25 169.99 402.47 True False 357.77345689487777 289.43597062601134 0.0 302.07291885362014 233.28694719250888 296.97170422906896 186.71505127864071 330.4056776766312 240.6908362454106 159.25680238932514 352.96874146753595 1.0136122972458277 0.8200045404095139 0.0 0.8558064308972331 0.6609280646851989 0.8413541181985451 0.5289846644842733 0.9360763117518723 0.6819041120884863 0.45119236827370074 1.0 8.463396615405564 -11.776405201714947 0.32078928073785845 1.2886506047550148 0.6639509790106716 0.0 0.30657222975537723 8.884446954613233 0.6742270899320786 2.147981139337989 0.09671683621436244 1.6733808639818876e-12 11.776405201714947 -0.6246996257443432 DSSDSADGRAT(ph)PSENLVPSSAR ddPTM_A549_MK2206_60min_R1 3 DSSDSADGRATPSENLVPSSAR 22 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 DSSDS(0.001)ADGRAT(0.998)PS(0.001)ENLVPSSAR;DSSDSADGRAT(0.995)PS(0.005)ENLVPSSAR;DSSDS(0.002)ADGRAT(0.995)PS(0.003)ENLVPSSAR 159.56 4.0206e-33 446255200.0 5728.04 6486.07 5404.349999999999 5561.139999999999 7329.11 6161.78 5720.259999999999 5292.849999999999 8252.6 9630.609999999999 8239.6 True False 6694.793114867518 6816.183258755108 6170.76809460191 6923.619549649056 6251.007627813312 6813.815469741461 6759.557197755236 6043.127696173309 6383.399276694185 7455.048512250866 6193.479918608693 1.0809420879451952 1.1005417549309338 0.9963329462103294 1.1178884311623605 1.0092884307304806 1.1001594514368136 1.0913989044262062 0.9757241123873445 1.0306644020132958 1.2036930143023008 1.0 12.596534526191574 -8.252436757339925 24.95081204607878 1.0119782890967095 1.0697641170543317 0.0 0.06901323912592494 496.87230761297576 1377085.1397611587 0.0056517570048084265 0.00724235689810831 5.591949525090367e-09 8.252436757339925 0.057785827957622216 DSSDSADGRAT(ph)PSENLVPSSAR ddPTM_A549_PD325901_60min_R1 4 DSSDSADGRATPSENLVPSSAR 22 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 DSSDSADGRAT(0.999)PS(0.001)ENLVPSSAR;DS(0.001)S(0.001)DS(0.011)ADGRAT(0.977)PS(0.01)ENLVPSSAR;DSSDS(0.003)ADGRAT(0.973)PS(0.023)ENLVPS(0.001)SAR;DSSDSADGRAT(1)PSENLVPSSAR 226.33 8.990099999999999e-88 598775100.0 8533.42 8776.23 8324.33 9636.76 9840.130000000001 8705.56 9734.59 9175.369999999999 10084.52 10592.57 10769.77 True False 9399.726516428218 9515.833702281869 8889.269092062761 10232.000778530097 9148.993215405613 8634.664805679218 10105.045149422043 8992.360047411481 9660.70269426296 9923.753322460689 9445.156565196974 0.9951901222118271 1.0074828973555952 0.9411457640434974 1.0833066353005143 0.968643891951707 0.9141896956473741 1.0698652880627297 0.9520604539840097 1.022820810600453 1.0506711301141607 1.0 13.205358995935462 DSSFTEVPRS(ph)PK ddPTM_A549_MK2206_60min_R1 4 DSSFTEVPRSPK 12 1 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 DSS(0.001)FT(0.034)EVPRS(0.965)PK;DSSFTEVPRS(1)PK;DSSFT(0.001)EVPRS(0.999)PK;DSSFT(0.005)EVPRS(0.995)PK 167.73 1.2244000000000001e-15 541996000.0 21001.7 24636.800000000003 23371.6 20875.0 30080.500000000004 23624.4 22210.899999999998 22797.699999999997 34688.9 32200.5 34347.200000000004 True False 24546.27351773263 25890.707887719043 26686.04431611535 25989.375937114353 25655.698297397405 26124.318327392455 26246.333027453606 26029.343790028124 26831.91953679047 24926.3846857815 25817.842305504717 0.9507484485835219 1.0028222955796267 1.0336279848771683 1.0066439956360358 0.9937196917469459 1.0118707062449752 1.0165966898735581 1.0081920666344109 1.039278155753145 0.9654712578543736 1.0 14.65608081376455 -5.294715328884741 3.456792042119244 1.0159903763567963 0.9448599774501981 0.3605083605180388 0.019868500572522912 0.14391796337433616 2.9453320695581606 0.0022212632597141463 0.025356570756224633 5.0732313921255925e-06 5.294715328884741 -0.07113039890659822 DSSFTEVPRS(ph)PK ddPTM_A549_PD325901_60min_R1 6 DSSFTEVPRSPK 12 1 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 DSSFT(0.001)EVPRS(0.999)PK;DSSFT(0.001)EVPRS(0.999)PK;DSSFTEVPRS(1)PK;DSSFTEVPRS(1)PK;DSSFTEVPRS(1)PK;DSSFTEVPRS(1)PK 157.35 6.7043e-14 918172000.0 40895.6 38981.8 41256.1 42357.6 46786.59999999999 42837.6 43210.4 45419.1 46683.700000000004 47493.7 52908.4 True False 45047.29120625047 42266.93309263898 44055.98703908308 44973.93275091071 43500.47062100766 42488.74478836102 44854.79541763818 44513.18041990534 44721.74643593983 44494.939676674476 46401.00221398111 0.9708258239447519 0.9109056071186219 0.9494619714444129 0.9692448569000863 0.9374898934381316 0.9156859283431321 0.9666772974167132 0.959315064244303 0.9638099243999668 0.9589219532690973 1.0 15.501868345969656 -9.768009515254214 0.4249134640740397 1.0040427508189582 0.9417843422561896 0.18126142642523613 0.02208476097731825 0.6637197929572984 0.2498955088127765 0.01693654729072332 0.006408559049211659 1.706045009689133e-10 9.768009515254214 -0.06225840856276865 DSSIIDPGTEQDLPS(ph)PENSSVK ddPTM_A549_MK2206_60min_R1 1 DSSIIDPGTEQDLPSPENSSVK 22 0 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 DSSIIDPGTEQDLPS(0.993)PENS(0.006)S(0.001)VK 96.131 1.6006e-14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DSSKGEDS(ph)AEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A549_MK2206_60min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-4;Q12906-6;Q12906-7 Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.142)S(0.142)KGEDS(0.357)AEET(0.357)EAKPAVVAPAPVVEAVS(0.001)T(0.001)PSAAFPSDATAENVK 48.538000000000004 0.0012873 17699000.0 378.18 328.54 337.96 533.72 408.65 546.7 291.46 365.36 775.62 623.26 584.89 True False 442.00753838670767 345.26128269220055 385.88780986643394 664.4814239596011 348.5381263353818 604.5514311299106 344.4145092806515 417.15089886807306 599.9433084106277 482.46513312713074 439.6456708572063 1.0053722069522402 0.7853171441880042 0.8777245755975327 1.5114021768121078 0.7927705182580642 1.3750878746313517 0.7833911081374318 0.9488343148124859 1.3646064278101009 1.097395391580762 1.0 8.78019745253314 -6.101202335152755 24.300555196933914 1.139424525007383 0.8788783151576917 0.14545291827764473 0.2283994046554318 35.74545006761564 8572.367266841567 0.03184598419202307 0.08425662269794591 7.921321949353674e-07 6.101202335152755 -0.26054620984969123 DSSKGEDS(ph)AEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A549_PD325901_60min_R1 2 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-4;Q12906-6;Q12906-7 Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.137)S(0.137)KGEDS(0.68)AEET(0.047)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK;DS(0.067)S(0.067)KGEDS(0.433)AEET(0.433)EAKPAVVAPAPVVEAVS(0.001)T(0.001)PSAAFPSDATAENVK 120.17 9.2052e-23 42936000.0 1992.5300000000002 1515.51 1457.01 1350.71 1923.5 2155.3 1431.9099999999999 1790.87 1872.42 1779.46 2174.28 True False 2194.810178776942 1643.2273463828083 1555.8914603128842 1434.14028901502 1788.3999957147616 2137.747951387438 1486.4021186212183 1755.1496929396626 1793.728698915948 1667.1045919154558 1906.857343896524 1.1510091123502753 0.8617463449179648 0.8159453906150805 0.7520962664592721 0.9378782327052828 1.1210843633531107 0.7795035760692323 0.9204410065375641 0.9406727276465233 0.874268123544496 1.0 10.896981201227616 -9.8098595694077 0.6156930054316204 0.9986403463086723 0.9087948400242271 0.0 0.12498650764249666 1.5960667622900429 1.262389007733964 0.0646253010050809 0.02864006158306654 1.549317514993119e-10 9.8098595694077 -0.08984550628444521 DSSKGEDS(ph)AEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK ddPTM_A549_PD325901_60min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK 49 2 Q12906-5;Q12906-2;Q12906-3;Q12906 Q12906-5 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.152)S(0.152)KGEDS(0.652)AEET(0.044)EAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK 161.62 1.6215999999999995e-55 40636000.0 1637.7 1424.8 1604.8 1686.9 1835.6 1838.8 2138.3 2295.0 1884.4 2103.9 2090.1 True False 1803.9580983889812 1544.8728963360347 1713.7113784463506 1791.0959817721339 1706.673788476223 1823.8254224521959 2219.6741766226573 2249.22442460733 1805.2052211775194 1971.0593949461806 1833.0309502355378 0.9841394648340112 0.8427969512121573 0.9349058608236511 0.9771226075271585 0.9310665421426308 0.9949779747133244 1.2109310954828325 1.2270520714984725 0.9848198258439429 1.0753006623771992 1.0 10.84001543026403 -7.371479721351751 4.635455820104773 1.031408509089098 0.9316117887179635 0.3377399625532951 0.08982898933818714 0.31542732293819736 10.88900504870984 0.015371116628172043 0.024874622873323805 4.251285570020238e-08 7.371479721351751 -0.09979672037113463 DSSKGEDSAEET(ph)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A549_PD325901_60min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-4;Q12906-6;Q12906-7 Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.11)S(0.11)KGEDS(0.358)AEET(0.421)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 78.551 2.2686999999999997e-07 36346000.0 973.86 857.28 852.8 1259.4 1014.9 942.41 789.07 982.51 829.45 966.28 1037.8 True False 1072.7255502821592 929.5259942244212 910.6761363029957 1337.1902776950772 943.616925214926 934.7353254150393 819.0984906456723 962.9130672858155 794.5911009900731 905.268915893624 910.1571791562316 1.1786157103948112 1.021280736461526 1.000570184094186 1.469186101388257 1.0367626019164224 1.027004287634794 0.8999527877207144 1.0579634917328145 0.8730262411671631 0.9946292097952364 1.0 9.82997190212766 -7.23071446951506 2.870659725517549 0.9484701617103256 1.1513156562908153 0.30989526829939484 0.1266529987864149 0.23009233967150863 3.789912088219814 0.01889287657077971 0.03350826364853189 5.878757292438226e-08 7.23071446951506 0.20284549458048973 DSSLRS(ph)R ddPTM_A549_MK2206_60min_R1 1 DSSLRSR 7 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 DSS(0.004)LRS(0.996)R 43.769 0.023986 6504200.0 604.5 633.7 630.21 445.83 582.48 427.5 498.78 608.13 639.05 973.96 1011.3 True False 706.5248213939524 665.9526232484558 719.5832543967497 555.0583700140689 496.7979636065905 472.73776624846687 589.4018696871046 694.3342898200166 494.3061953531518 753.9417595554032 760.1662995399015 0.9294345484949593 0.8760617560282934 0.9466129382903252 0.7301801860330085 0.6535385269082339 0.6218872982590734 0.7753591155564857 0.9133978844369575 0.6502606017293002 0.991811607554471 1.0 9.57017125737875 -6.249930981198955 24.34975830534806 0.7991421903407325 0.9132389525530976 0.16317989002246158 0.12554783418207474 992.9505878850077 2100902.5286087105 0.021038425066163675 0.05511301831296275 5.624307005102464e-07 6.249930981198955 0.11409676221236509 DSSPSSS(ph)PSPK ddPTM_A549_MK2206_60min_R1 2 DSSPSSSPSPK 11 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSS(0.001)PS(0.086)S(0.088)S(0.639)PS(0.185)PK;DSSPSS(0.03)S(0.485)PS(0.485)PK 140.39 1.5747e-09 12531800.0 3081.4 2905.5 2735.7 2539.0 3180.0 2731.1400000000003 2339.8 2378.8999999999996 3425.5 3444.4 3348.7 True False 3601.4649870030166 3053.377539606105 3123.6633964126027 3161.0551139800414 2712.226212520529 3020.147422015994 2764.911373138233 2716.116360075703 2649.629719399454 2666.3076477603086 2517.1253705816935 1.430784906105308 1.2130415017431122 1.2409645673273484 1.2558194958916724 1.0775093859920648 1.1998398877200362 1.0984400719378065 1.0790548582997375 1.0526411399155458 1.0592669236590866 1.0 11.297561359330256 -2.000000000008542 0.19306557891720613 0.9839629137643097 2.7908355116380346 0.8063472904824078 0.052678572894724045 12.131007337268521 0.1323988099057758 0.03971315565756353 6.641827392302182 0.009999999999803312 2.000000000008542 1.806872597873725 DSSPSSS(ph)PSPK ddPTM_A549_PD325901_60min_R1 1 DSSPSSSPSPK 11 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DSSPS(0.001)S(0.014)S(0.756)PS(0.229)PK 134.56 5.5488e-08 16827000.0 2832.6 2674.5 2477.4 3015.1 3087.0 3036.6 2416.6 2837.2 2571.2 2524.5 3011.1 True False 3120.1634667500944 2899.8895011585646 2645.5312618164194 3201.335879211071 2870.1797695718583 3011.87093638152 2508.5650354142595 2780.609820259657 2463.1414055888536 2365.1026391661353 2640.7537889355663 1.1815427397371143 1.0981294482313138 1.0018091322640037 1.21228108906793 1.0868789743282992 1.1405345507789817 0.9499427950931429 1.0529606477930924 0.9327417860419678 0.8956164899111855 1.0 11.3667340825548 -7.7614655484640585 24.999999999914092 0.9738868845107221 1.1164830296181874 0.5953310511352934 0.0630143774693916 0.37238657441237066 355423.1191066491 0.00892413692785063 0.01276989953481017 1.731946416441381e-08 7.7614655484640585 0.1425961451074652 DSSSEKDGRS(ph)PNKR ddPTM_A549_MK2206_60min_R1 2 DSSSEKDGRSPNKR 14 3 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 DS(0.018)S(0.016)S(0.015)EKDGRS(0.951)PNKR;DS(0.001)S(0.001)S(0.001)EKDGRS(0.996)PNKR 51.798 0.0040387 28777000.0 5855.7 5291.8 5190.8 3794.2 3894.2 2532.5 2544.2 2576.3 4179.3 9856.1 9356.9 True False 6843.999001880173 5561.130016894709 5926.9334934746275 4723.77917032811 3321.3683386155453 2800.4874690625543 3006.448207341775 2941.4984145878498 3232.6952229707017 7629.60016464126 7033.3234926974255 0.9730817882877384 0.7906830992017829 0.8426931449446989 0.6716283098925744 0.47223312592745986 0.39817413090273046 0.4274576891654872 0.41822310855486106 0.4596255563002543 1.0847787923537056 1.0 12.779990859223329 -6.253712943016563 3.8761231137203116 0.6449053410808117 0.8664193527772708 0.19244391775577474 0.22573338807553664 0.38748440384117805 13.36710225765535 0.037271084491723915 0.09941194818518061 5.57554155480898e-07 6.253712943016563 0.22151401169645912 DSSSEKDGRS(ph)PNKR ddPTM_A549_PD325901_60min_R1 3 DSSSEKDGRSPNKR 14 3 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 DSSSEKDGRS(1)PNKR;DSSSEKDGRS(0.999)PNKR;DS(0.002)S(0.002)S(0.001)EKDGRS(0.995)PNKR 91.40100000000001 1.1400000000000001e-05 131552000.0 14861.2 14636.7 14683.2 13290.0 15164.9 12732.099999999999 10138.599999999999 12183.9 14560.8 15352.5 15716.2 True False 16369.898083762795 15870.186076503116 15679.69024925441 14110.893116220086 14099.769740064867 12628.413998914304 10524.429971054791 11940.882556415349 13948.86021254597 14383.140529925953 13783.207033200213 1.187669752353854 1.1514146191286183 1.1375937553202282 1.0237742988428282 1.0229672750399914 0.9162173918229402 0.7635690261130184 0.8663355725306036 1.0120184786419257 1.0435264082793398 1.0 13.750623988388528 -6.330746741337169 1.6327974423927694 0.9698376902302503 1.173780263246217 0.5816250708650239 0.07790514296763042 0.27090384191391714 1.367153296739647 0.013123421265021754 0.04541288982440598 4.669315919177173e-07 6.330746741337169 0.20394257301596674 DSSSLSSCTSGILEERS(ph)PAFR ddPTM_A549_PD325901_60min_R1 1 DSSSLSSCTSGILEERSPAFR 21 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSSSLSSCTSGILEERS(1)PAFR 99.6 4.8346e-08 9443000.0 3860.1 3717.8 3358.4 3413.4 3816.1 3325.6 2870.8 3381.6 3365.8 3541.0 4502.9 True False 4251.974510344572 4031.1120536202347 3586.3212196997933 3624.237965606141 3548.0703008303108 3298.5174161991663 2980.0498649620367 3314.151335186119 3224.3471308847875 3317.42065568916 3949.07184623492 1.076702241920071 1.0207745542698932 0.9081428141448031 0.9177442464262892 0.8984567612293689 0.8352639669860659 0.754620321178315 0.8392228514013641 0.8164822663226319 0.8400507220075062 1.0 11.947297899931591 -5.629790972289586 1.6874209845407342 0.8880092874133372 1.092773190938994 0.5402709633642224 0.06326838140372448 0.4411205808928665 1.9496762334933906 0.012164461274771882 0.11597867579102177 2.345357373804806e-06 5.629790972289586 0.20476390352565677 DSSSLSSCTSGILEERS(ph)PAFRGPDR ddPTM_A549_MK2206_60min_R1 2 DSSSLSSCTSGILEERSPAFRGPDR 25 2 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSSSLSSCTSGILEERS(1)PAFRGPDR;DSSSLSSCTSGILEERS(1)PAFRGPDR 155.8 5.994e-41 22273000.0 2719.2 2971.5 2252.83 2394.2 3669.7000000000003 3367.7999999999997 2968.0 3014.3 4215.5 3488.3 4710.7 True False 3178.1344819428205 3122.7366576973095 2572.3151695508295 2980.779107479723 3129.8919912221954 3724.178360635289 3507.2471815857193 3441.586255906596 3260.695980770225 2700.290607270435 3540.90318129399 0.8975491051922523 0.8819039939285023 0.7264573578684523 0.8418132196403135 0.8839247590154118 1.0517594438361126 0.9904950804963915 0.9719515275334075 0.9208656136083998 0.7625993903294579 1.0 11.789901681405139 -7.033044426942267 5.27653433374745 0.9705847808376591 0.83499558338899 0.2819832885578385 0.08068256651723553 0.1071245225276845 8.020310282102283 0.008163445740596006 0.014687675694406679 9.267350164896832e-08 7.033044426942267 -0.13558919744866904 DSSSLSSCTSGILEERS(ph)PAFRGPDR ddPTM_A549_PD325901_60min_R1 2 DSSSLSSCTSGILEERSPAFRGPDR 25 2 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 DSSSLSSCTSGILEERS(1)PAFRGPDR;DSSSLSSCTSGILEERS(1)PAFRGPDR 180.35 9.9802e-50 38774000.0 2335.57 2228.48 2814.0 2327.62 2229.4 2495.8 2018.89 2446.2 2491.0 2815.8 3344.2 True False 2572.675347044239 2416.2818304512416 3004.974961956652 2471.391800991435 2072.8146350124725 2475.475032279854 2095.7199637289978 2397.4086219932237 2386.311932685842 2638.0099074525665 2932.88460063044 0.8771826025787812 0.8238584736446324 1.0245800197221246 0.8426488380961854 0.7067494692995794 0.8440410617409688 0.714559298814045 0.8174234408942946 0.8136398998354353 0.8994591559741257 1.0 11.51810459156552 -10.63858072973104 0.9003737462214927 1.0005174848182063 0.8285875150521366 0.20247562405602326 0.0843639043440247 0.5063184635831701 0.727988796409797 0.056511516489168266 0.015025001627294362 2.2983664329385937e-11 10.63858072973104 -0.17192996976606978 DSSSSLTDPQVS(ph)YVKSPAAERR ddPTM_A549_MK2206_60min_R1 1 DSSSSLTDPQVSYVKSPAAERR 22 2 H7C3M7;O94887-3;O94887-2;O94887 H7C3M7;O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 DSSSSLTDPQVS(0.5)YVKS(0.5)PAAERR 63.272 0.00025149 21663000.0 3499.2 4120.6 3791.8 3200.0 4227.5 3272.8 3148.9 2634.8 4879.5 4623.9 4931.6 True False 4089.779412773727 4330.320939494378 4329.5342568692895 3984.0001436534603 3605.6403501353866 3619.125523691184 3721.014369978193 3008.2909687365864 3774.3010409603376 3579.3577785619814 3706.9476147641417 1.1032741321956727 1.1681635106596722 1.1679512922236859 1.0747387224426548 0.9726709748405223 0.9763087855023423 1.0037947002968226 0.8115277800946189 1.0181695111978217 0.9655808904085961 1.0 11.85601601232145 -6.546024519939595 3.3519238311406796 0.9887839001285464 1.1473997661512412 0.6503114279832811 0.05773309942365807 0.12911746821257444 3.024809095528383 0.008564332757008469 0.019767986864798776 2.844300515848032e-07 6.546024519939595 0.15861586602269473 DSSSSLTDPQVSYVKS(ph)PAAER ddPTM_A549_MK2206_60min_R1 2 DSSSSLTDPQVSYVKSPAAER 21 1 H7C3M7;O94887-3;O94887-2;O94887 H7C3M7;O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 DSSSSLTDPQVS(0.181)YVKS(0.819)PAAER;DSSSSLTDPQVS(0.001)YVKS(0.999)PAAER 191.09 2.0035e-45 277220000.0 12629.2 13281.8 12865.6 11868.0 15997.1 11406.0 11818.8 11402.9 18918.0 17142.699999999997 19454.7 True False 14760.700205704721 13957.786888845409 14690.13553857732 14775.660532774757 13643.947781230223 12612.975349309965 13966.122974974833 13019.295994916663 14633.103205838244 13270.152163877778 14623.5610675951 1.0093779577679962 0.9544724998464974 1.0045525484985833 1.0104009867689956 0.9330113040293833 0.8625105260619134 0.9550425447275556 0.8902958680677727 1.0006525180972705 0.9074501144104775 1.0 13.836007052602701 -8.902983487032328 24.999590935910398 1.000317917822796 0.9521847317024006 0.0 0.05246652307106551 17.35923908021333 4458.110494412462 0.007981422391211457 0.00849685501760611 1.2503065691119714e-09 8.902983487032328 -0.04813318612039552 DSSSSLTDPQVSYVKS(ph)PAAER ddPTM_A549_PD325901_60min_R1 4 DSSSSLTDPQVSYVKSPAAER 21 1 H7C3M7;O94887-3;O94887-2;O94887 H7C3M7;O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 DSSSSLTDPQVS(0.002)YVKS(0.998)PAAER;DSSSSLTDPQVSYVKS(1)PAAER;DSSSSLTDPQVS(0.016)YVKS(0.984)PAAER;DSSSSLTDPQVS(0.001)YVKS(0.999)PAAER 263.59 3.009499999999999e-112 451117000.0 52560.0 50817.4 53335.0 54061.0 62134.0 55545.0 56530.0 56764.0 61425.0 60059.0 66784.0 True False 57895.85250737303 55099.96064168078 56954.63382940934 57400.22518856082 57769.92219066333 55092.659935886026 58681.28008440292 55631.797489503486 58843.52086119145 56266.864490266904 58569.991378656625 0.9884900295285128 0.940754119041234 0.9724200480275991 0.9800278920559637 0.9863399469735137 0.9406294697861648 1.0019000976972459 0.9498344831543916 1.0046701301484995 0.9606773565408275 1.0 15.83787406163611 -8.783180605997917 24.98487978111463 1.0022053449636095 0.9701086605413342 0.029653578959266236 0.022548989372450458 159.89547695336597 183750.0266039082 0.002935759134784908 0.0031266268797462563 1.6474771280920114e-09 8.783180605997917 -0.03209668442227531 DSSSSLTDPQVSYVKS(ph)PAAERR ddPTM_A549_PD325901_60min_R1 2 DSSSSLTDPQVSYVKSPAAERR 22 2 H7C3M7;O94887-3;O94887-2;O94887 H7C3M7;O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 DSSSSLTDPQVS(0.005)YVKS(0.995)PAAERR;DSSSSLTDPQVS(0.022)YVKS(0.978)PAAERR 173.36 6.2732e-41 47030000.0 4961.7 5066.6 5813.5 6062.799999999999 5755.1 6983.2 5405.3 6668.0 7365.6 7326.200000000001 6681.4 True False 5465.408131389515 5493.58016323425 6208.039069415418 6437.285386382172 5350.881630017169 6926.331134472585 5611.001649393653 6535.001509055198 7056.049446563962 6863.622481702883 5859.630156884223 0.9327223707060157 0.9375301881092416 1.059459198482325 1.098582199564129 0.9131773655937402 1.1820423728168479 0.9575692491106342 1.1152583583073943 1.20418000072481 1.1713405621068276 1.0 12.516593893393669 -5.061140341182283 0.5396239374264212 1.0917827501034576 0.7630654676861576 0.28567743226216735 0.08781940180843341 5.035596961724815 0.8400681391318122 0.017881909023600016 1.0881332427804882 8.686796722490014e-06 5.061140341182283 -0.3287172824173 DSSSTDS(ph)ANEKPALIPR ddPTM_A549_PD325901_60min_R1 1 DSSSTDSANEKPALIPR 17 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3;C9JKE4;F8VZ02;F8VT91;C9JGM8;C9JW67;F8W6C2;F2Z2S1 B8ZZZ7 SPATS2L SPATS2-like protein 1 DSS(0.001)S(0.003)T(0.003)DS(0.993)ANEKPALIPR 191.22 2.6677e-40 22115000.0 6029.5 6890.1 5814.6 5473.0 6488.6 6864.0 6429.9 6218.9 6534.0 6727.5 7305.5 True False 6641.610401316702 7470.752907808058 6209.213722030257 5811.05477991516 6032.8631204548 6808.101859751945 6674.593363076288 6094.859160867326 6259.398702597066 6302.72450187767 6406.969813380087 1.0366227085144994 1.1660352905372529 0.9691342245851006 0.9069895674831433 0.9416094185204344 1.062608699284668 1.041770689965997 0.951285761974255 0.9769670975388649 0.9837293893152557 1.0 12.645426477881687 -5.776952735985582 24.999946074464926 0.9851644423976125 1.1013290089857202 0.4612492328670673 0.04979789937478175 133.79049868065098 215605.9188178384 0.006737341039259174 0.02105420659322022 1.6712724880211556e-06 5.776952735985582 0.1161645665881077 DSSSTNLESMDT(ph)S ddPTM_A549_MK2206_60min_R1 2 DSSSTNLESMDTS 13 0 A0A0C4DGH5;Q86VP6-2;Q86VP6 A0A0C4DGH5 CAND1 Cullin-associated NEDD8-dissociated protein 1 1 DSSSTNLESMDT(0.5)S(0.5);DSSSTNLESMDT(0.5)S(0.5) 101.71 6.6141e-05 4041800.0 611.1500000000001 853.1600000000001 708.15 670.34 903.32 688.37 659.72 841.8299999999999 929.48 1230.2800000000002 1105.3899999999999 True False 714.2971788170619 896.5821998590067 808.5763183717462 834.5733300927061 770.4428246207686 761.2128564969752 779.582584446001 961.16198049625 718.9542640745598 952.3588935334317 830.891155788007 0.8596759922659559 1.079060949937178 0.9731434890589277 1.0044315964600765 0.9272487969740032 0.916140280461946 0.9382487453566097 1.156784464247541 0.8652809204506604 1.1461897107693078 1.0 9.698515690489257 -6.757390914447442 24.9689524104114 0.9500287871027246 0.9857957495883944 0.0 0.10349547104555845 340.3698578748038 2099206.9006178654 0.012618953290666018 0.025521043483330067 1.7482723361630025e-07 6.757390914447442 0.035766962485669795 DSSSTNLESMDT(ph)S ddPTM_A549_PD325901_60min_R1 2 DSSSTNLESMDTS 13 0 A0A0C4DGH5;Q86VP6-2;Q86VP6 A0A0C4DGH5 CAND1 Cullin-associated NEDD8-dissociated protein 1 1 DSSSTNLESMDT(0.5)S(0.5);DSSSTNLESMDT(0.5)S(0.5) 107.97 3.6785e-05 3732400.0 812.1700000000001 907.9100000000001 1017.74 923.37 1135.2 1077.54 807.9200000000001 1159.63 1055.54 980.8 1266.26 True False 894.620900512047 984.4227620104226 1086.8099565677894 980.4044677745778 1055.4674682273962 1068.7648714972484 838.6658377107877 1136.500269937863 1011.179324539227 918.8721206156252 1110.5180474834947 0.805588799334973 0.8864536368780209 0.9786513231645093 0.8828352407205244 0.9504280192646607 0.9624020734459366 0.7552023486797522 1.0233964882545095 0.9105474033768514 0.8274265534881208 1.0 10.117017123565322 -14.999999999256756 0.15643123234082357 1.3476593415033513 0.8793644468492483 0.0 0.08773418108810037 68.9054431516397 0.7004181782690991 7.382817467948067 0.11491630466136318 1.0000000017113817e-15 14.999999999256756 -0.468294894654103 DSSVPGS(ph)PSSIVAK ddPTM_A549_MK2206_60min_R1 1 DSSVPGSPSSIVAK 14 0 Q08495-2;Q08495;E5RGQ0;E5RJ61;A0A087WT94 Q08495-2 DMTN Dematin 1 DSSVPGS(0.789)PS(0.204)S(0.008)IVAK 207.64 3.651499999999999e-33 9387400.0 4208.5 4009.7 3676.4 3658.3 6115.9 4172.8 3414.5 4283.0 6505.5 5729.8 5963.6 True False 4918.791912053676 4213.776603186572 4197.768801612491 4554.583664227327 5216.2592116837395 4614.362926319536 4034.870451996108 4890.128366137392 5032.01463714878 4435.434200481076 4482.673533013106 1.0972897927606666 0.940014161672445 0.9364431227698371 1.0160417953002001 1.1636491422513968 1.0293774222763692 0.9001035703985342 1.0908954957624157 1.122547649319094 0.9894617950238555 1.0 12.130143718368455 -6.526437743374511 24.98558741125691 1.054777813216955 0.9844783473586686 0.061323152976703765 0.077809303657395 162.50866602662435 1140879.293717995 0.011487321651120035 0.024007618889574905 2.9755157720000186e-07 6.526437743374511 -0.07029946585828639 DSSVPGSPS(ph)SIVAK ddPTM_A549_MK2206_60min_R1 1 DSSVPGSPSSIVAK 14 0 Q08495-2;Q08495;E5RGQ0;E5RJ61;A0A087WT94 Q08495-2 DMTN Dematin 1 DSSVPGS(0.12)PS(0.827)S(0.053)IVAK 210.14 3.1627999999999997e-38 8997000.0 4891.9 5204.6 3909.6 3789.1 5693.5 4229.4 4934.2 4087.0 6361.7 5173.8 6076.2 True False 5717.533124527834 5469.491909356021 4464.040068214614 4717.429670099163 4855.993692133846 4676.9523007514945 5830.680270680684 4666.344765912567 4920.785107547368 4005.034986639847 4567.311845411205 1.2518376931656772 1.197529771226644 0.9773889367111317 1.0328678727814002 1.063206073176869 1.0240054673408048 1.2766109405336075 1.0216829776142526 1.0773919701785415 0.876891073392267 1.0 12.157129581597301 DSSVPGSPS(ph)SIVAK ddPTM_A549_PD325901_60min_R1 2 DSSVPGSPSSIVAK 14 0 Q08495-2;Q08495;E5RGQ0;E5RJ61;A0A087WT94 Q08495-2 DMTN Dematin 1 DSSVPGS(0.227)PS(0.704)S(0.069)IVAK;DSSVPGS(0.235)PS(0.738)S(0.027)IVAK 232.37 1.339e-47 18616800.0 6766.700000000001 8170.5 8231.8 8373.5 9231.6 7869.9 7502.7 9204.8 11508.3 12343.7 13668.599999999999 True False 7453.650402618747 8859.056709372247 8790.459449834661 8890.712077401717 8583.204263291083 7805.81014365703 7788.2193541349725 9021.203042974095 11024.646172191278 11564.316675410982 11987.448852394367 0.6217878795061518 0.7390276962560507 0.7333052727127056 0.7416684055862219 0.7160159237364903 0.6511652512367467 0.6496978172782241 0.752554038315851 0.9196824368505414 0.9647020661198593 1.0 13.549237039167878 -8.776489214221122 2.3187983833430024 0.9681808289249291 0.6967955242301411 0.8993869236864475 0.03944036599470752 0.06539715051308455 0.6888289726431641 0.00828133090558493 0.008918120444313697 1.673057186548461e-09 8.776489214221122 -0.27138530469478794 DSTEEKS(ph)PR ddPTM_A549_MK2206_60min_R1 2 DSTEEKSPR 9 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 DS(0.006)T(0.006)EEKS(0.988)PR;DS(0.001)T(0.001)EEKS(0.999)PR 54.471000000000004 0.0054917 11937800.0 4359.7 3215.7 2537.2 2083.1800000000003 771.1600000000001 508.11 631.3399999999999 366.68 528.08 4958.1 4961.1 True False 5095.510775568593 3379.3653946347767 2897.0131115904733 2593.5591935175034 657.7233855494749 561.877862943879 746.0463058026711 418.6580129104038 408.4707231704756 3838.061766450002 3729.121950605564 1.366410335478877 0.9062094078435834 0.7768619932421448 0.6954878997980586 0.1763748663254814 0.15067296548256806 0.2000595088292895 0.1122671820486908 0.1095353620988836 1.0292132618046312 1.0 11.86462026189085 -5.553059948879843 1.1389152679848802 0.4560828766087655 1.5095660872551755 0.44245447314267816 0.32508320684742575 0.9436847605547823 1.3764759165654734 0.05898013410148405 1.0401006588679087 2.798594982203676e-06 5.553059948879843 1.05348321064641 DSTEEKS(ph)PR ddPTM_A549_PD325901_60min_R1 4 DSTEEKSPR 9 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 DSTEEKS(1)PR;DSTEEKS(1)PR;DS(0.021)T(0.017)EEKS(0.961)PR;DS(0.002)T(0.002)EEKS(0.995)PR 74.611 0.00059637 39577500.0 9659.9 9517.1 8276.1 9175.1 10611.300000000001 8257.4 6973.299999999999 8157.200000000001 9073.1 10109.599999999999 11543.6 True False 10640.565936757479 10319.139417265353 8837.765914232206 9741.825088836027 9865.998894997681 8190.154472132244 7238.672747436174 7994.498246800397 8691.789159555163 9471.27813068487 10123.810380909501 1.0510435830388947 1.0192940235945336 0.8729683371882989 0.962268624391288 0.9745341451280068 0.808999197335466 0.7150146511126049 0.7896728549831046 0.8585491857833781 0.9355447972973583 1.0 13.305464770668229 -5.681969409319343 5.256634586718546 0.901286605227869 1.0419860193753887 0.3116558059572214 0.08452108272455623 0.23675904606739998 11.128879367956412 0.01395866118808753 0.05647289162792886 2.0798431812004887e-06 5.681969409319343 0.14069941414751974 DSVSS(ph)VSDISQYR ddPTM_A549_MK2206_60min_R1 2 DSVSSVSDISQYR 13 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;F5H1B5;F5H2B8;F5GYM8;F5H3Q6;F5H0R8 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 DSVS(0.037)S(0.962)VSDISQYR;DSVS(0.032)S(0.967)VS(0.001)DISQYR 127.79 5.4040999999999994e-08 6634400.0 4601.5 4645.200000000001 4021.8 3943.3999999999996 5670.3 4493.5 4094.4 4868.799999999999 6677.9 6164.5 6412.2 True False 5378.120704126177 4881.620838746611 4592.151715353366 4909.533177025955 4836.206381400988 4968.9991874561065 4838.299481227955 5558.967310074653 5165.366312415007 4771.935168568814 4819.873772282957 1.1158218987089372 1.0128109301987813 0.952753522667103 1.0186020234095323 1.0033885968574432 1.030939693074683 1.003822861306235 1.1533429240495692 1.0716808274355296 0.990053971124759 1.0 12.234779648858819 DSYES(ph)YGNSR ddPTM_A549_MK2206_60min_R1 2 DSYESYGNSR 10 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DS(0.01)YES(0.988)YGNS(0.002)R;DSYES(1)YGNSR 79.492 0.0012563 5403800.0 2176.1 2431.2 1976.38 1878.41 2755.3 2352.0 2047.9700000000003 2032.98 3741.5 3321.6 3873.8 True False 2543.3724794629943 2554.9376955051994 2256.6604026033338 2338.6205343250285 2349.9990199238387 2600.887078868755 2420.0596396469364 2321.161140740134 2894.056223947763 2571.248253048611 2911.828548558955 0.8734623062617106 0.8774341115549614 0.7749976913029926 0.8031449981773126 0.8070526752293977 0.8932143618675341 0.8311133706153847 0.79714897427215 0.993896507189619 0.8830355943591202 1.0 11.507709695340942 -8.769596143580667 24.993611786868744 0.9971178127397449 0.8319887548549426 0.5369071255143025 0.0490673762375846 50.59084963560261 155017.91194171735 0.006171073408367012 0.0066243562281503975 1.699823607117395e-09 8.769596143580667 -0.16512905788480225 DSYES(ph)YGNSR ddPTM_A549_PD325901_60min_R1 1 DSYESYGNSR 10 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DSYES(0.999)YGNSR 79.492 0.0012563 3990300.0 1407.4 1525.6 1545.8 1557.9 1982.8 1496.3 1717.5 1516.0 1703.6 1679.4 1763.2 True False 1550.2782119268795 1654.1676660936653 1650.7072836505292 1654.1279447523898 1843.5349682886547 1484.1146288966847 1782.860402352063 1485.7621907210078 1632.0036164285834 1573.3623973918022 1546.3375778457003 1.0025483659827172 1.0697325666742121 1.0674947742977525 1.0697068793069486 1.192194378964132 0.9597610833232791 1.1529567850481117 0.9608265439626166 1.0553993124206618 1.0174766622329336 1.0 10.59463959016007 -10.076668846826813 0.3887063433668622 0.9923273972241955 1.0699985694744139 0.09145882150716533 0.06668279682173049 2.6808153019803846 0.7259257999476165 0.08392595734086652 0.022855567195865057 8.381681487459296e-11 10.076668846826813 0.07767117225021836 DSYS(ph)PR ddPTM_A549_MK2206_60min_R1 2 DSYSPR 6 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 DSYS(1)PR;DSYS(1)PR 105.04 0.028883999999999996 43276000.0 5582.5 6092.1 5425.9 5652.299999999999 7908.1 6029.0 5841.6 5831.8 8031.0 7988.6 8628.8 True False 6524.689520978893 6402.161868537031 6195.374208646832 7037.113753741391 6744.828965796729 6666.984778273694 6902.943105104832 6658.475509138466 6211.991322871707 6183.969711676342 6486.03081723514 1.005960302199155 0.9870692953731817 0.955187291460911 1.0849645880562075 1.0399008508985021 1.0278990288725904 1.06427849321373 1.0265870910519101 0.9577492765474941 0.9534289746579465 1.0 12.663120163183942 -8.744256239781325 24.79453404310021 0.9800482701145872 1.0244946877377328 0.30485547907676314 0.03521915960120814 239.95290806424242 346241.45531868824 0.006297396590357861 0.007131626978028643 1.8019542490975442e-09 8.744256239781325 0.044446417623145607 DSYS(ph)PR ddPTM_A549_PD325901_60min_R1 2 DSYSPR 6 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 DSYS(1)PR;DSYS(1)PR 120.62 0.017065 51346000.0 7025.8 6420.4 6950.6 6290.5 7497.799999999999 7284.7 6477.5 6745.9 6802.2 7286.8 8661.7 True False 7739.0540438794005 6961.469640395759 7422.3095133532 6679.049898237954 6971.180394005791 7225.375818434588 6724.004807124009 6611.347732443825 6516.327189287688 6826.710204426937 7596.365811040214 1.0187837495440004 0.9164210641723275 0.9770868989176313 0.8792427937752715 0.917699406191602 0.9511621738823522 0.8851607432269316 0.8703303522896688 0.8578216678055648 0.8986810764833502 1.0 12.891093666329875 -2.642280719509518 1.268331011368918 0.9224565121213804 93.57979268663136 0.30115118180576295 0.04352562961433794 1929.1700979923185 4.091201649740538 0.008459641045087351 519537.6836060154 0.002278868579489408 2.642280719509518 92.65733617450998 DSYS(ph)SR ddPTM_A549_PD325901_60min_R1 1 DSYSSR 6 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DSYS(0.692)S(0.308)R 99.79899999999999 0.033571 10958000.0 3990.9 4164.3 4147.6 3542.2 4769.0 3894.1 2709.5 3633.1 3995.2 4222.0 4489.0 True False 4396.053230054701 4515.2401756121235 4429.08107754492 3760.9936490801188 4434.041892156847 3862.3877406847396 2812.611505195292 3560.634970388186 3827.295637682249 3955.4221994689733 3936.881458115556 1.1166333751280726 1.146907831401509 1.1250227177693488 0.955323061944662 1.1262828051417286 0.981077988193611 0.7144262622887274 0.9044303234094669 0.9721643078159224 1.004709499524096 1.0 11.942837557391819 -6.256436869430853 21.529464847840263 0.9691034999026181 1.1312600712290277 0.3964376661625756 0.09381373554485853 52.80671177316713 227255.10724976892 0.013668236512367985 0.034831648435112404 5.540680793643673e-07 6.256436869430853 0.1621565713264096 DSYS(ph)SRDYPSSR ddPTM_A549_MK2206_60min_R1 3 DSYSSRDYPSSR 12 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DS(0.028)YS(0.935)S(0.037)RDYPSSR;DS(0.148)Y(0.001)S(0.732)S(0.118)RDYPSSR;DS(0.028)YS(0.935)S(0.037)RDYPSSR 105.14 4.6698999999999995e-05 22409700.0 2855.0 3195.77 3117.86 2484.3900000000003 3384.37 2882.62 2167.6800000000003 2213.58 3868.08 5051.23 4582.5599999999995 True False 3336.854201951587 3358.421042762689 3560.0194309094572 3093.0656615285043 2886.533656247829 3187.656935071709 2561.519397095598 2527.361743804438 2991.9660560544853 3910.1536347684046 3444.583879778077 0.9687249079754067 0.9749859953995549 1.0335121904881055 0.8979504548246856 0.8379919772584544 0.9254113258165393 0.7436368184074031 0.7337204817805939 0.868600144597799 1.1351599412990119 1.0 11.750113994488434 -6.280967609992972 22.200574258637005 0.8980659925054076 0.9906655118774106 0.1460030015978857 0.10670685550823729 272.0209245727474 309246.0812754781 0.013986898623908938 0.0325735726185108 5.23639488553865e-07 6.280967609992972 0.09259951937200295 DSYS(ph)SRDYPSSR ddPTM_A549_PD325901_60min_R1 3 DSYSSRDYPSSR 12 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DS(0.144)YS(0.837)S(0.019)RDYPSSR;DS(0.025)YS(0.942)S(0.033)RDYPSSR;DSYS(0.883)S(0.116)RDYPSSR 151.56 6.2556e-13 32386600.0 3531.08 3883.9900000000002 3678.1 4320.12 3763.38 4427.87 4009.8999999999996 4541.1900000000005 4637.17 4676.41 4801.92 True False 3889.5526421562936 4211.307468164089 3927.717984212066 4586.964000695611 3499.053171756184 4391.810894775621 4162.498938801474 4450.612402955361 4442.2858710930595 4381.140674518875 4211.314281878872 0.9235959089761819 0.9999983820455263 0.9326584817269254 1.0892001151358248 0.8308696377310235 1.042859924673259 0.9884085252702586 1.0568226698506402 1.0548454885469007 1.0403262215244204 1.0 12.040054829603676 DSYS(ph)SSR ddPTM_A549_MK2206_60min_R1 1 DSYSSSR 7 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DSYS(0.948)S(0.052)SR 120.15 0.0066658 158470000.0 4075.4 4594.0 4306.6 4225.4 5112.4 3786.6 3433.8 3986.0 6038.0 7294.0 6884.4 True False 4763.227886036249 4827.814977439492 4917.340637858872 5260.623189685411 4360.3727323553285 4187.29549865835 4057.677012172858 4551.0277066130375 4670.402640704688 5646.280334096997 5174.813480225941 0.920463685162287 0.9329447323826446 0.950245000452494 1.0165821840318239 0.8426144727761178 0.8091683912200688 0.784120437901405 0.8794573416034179 0.9025257931616832 1.0911079898188853 1.0 12.337291148046507 -10.300597257464377 0.9091355990929944 0.994284870350895 0.8931032113572444 0.3769525339173536 0.06929044723025934 0.591160959411459 0.9469869610311967 0.034145738452749215 0.013199690024771489 5.004984565577245e-11 10.300597257464377 -0.10118165899365061 DSYS(ph)SSR ddPTM_A549_PD325901_60min_R1 2 DSYSSSR 7 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DSYS(0.907)S(0.092)S(0.001)R;DSYS(0.496)S(0.496)S(0.007)R 118.33 0.0068937 389680000.0 10106.2 9498.7 9809.7 9406.3 10719.8 9754.400000000001 9641.9 9646.900000000001 10943.8 10487.7 11439.8 True False 11132.173984208775 10299.188784690545 10475.445232518172 9987.305787742733 9966.878229302365 9674.963400461014 10008.827780750129 9454.485011653356 10483.870144089648 9825.504832157918 10032.777122867086 1.1095805127411733 1.026554129386194 1.0441221911171674 0.995467721990882 0.9934316398383333 0.9643355256451845 0.997612890047924 0.9423597171419601 1.044961929852345 0.9793404868691097 1.0 13.292433385980278 -4.559456842979629 1.089827329428988 1.0076754928538105 1.414555084162142 0.528612530442087 0.029929307307135937 4.7491505600468935 1.4965236398036066 0.004874104348333988 3.235193763622765 2.757675476421134e-05 4.559456842979629 0.4068795913083314 DSYSS(ph)RDYPSSR ddPTM_A549_PD325901_60min_R1 1 DSYSSRDYPSSR 12 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DS(0.018)Y(0.001)S(0.429)S(0.55)RDYPS(0.001)SR 61.235 0.0068645 2405000.0 636.35 606.93 753.41 717.12 645.54 715.13 691.19 909.97 1066.6 830.47 1060.1 True False 700.9517835438892 658.0781211210202 804.5409332223741 761.4148737023131 600.1994973921011 709.3062183805962 717.4936136836809 891.8199344923445 1021.7745112014126 778.0339824711035 929.7144205275795 0.7539431120645889 0.7078282390710736 0.8653635088996748 0.818977157813942 0.6455740431040206 0.762929134710087 0.7717354897824744 0.9592407246800246 1.0990197512711402 0.8368526563561284 1.0 9.860643822813017 -8.364410387084485 3.043872923302653 1.04645596881412 0.7592115231459516 0.5587743802196246 0.08526546038856857 0.07883584298643302 1.409168299184413 0.010710899403834073 0.013153734700887642 4.321053196207384e-09 8.364410387084485 -0.2872444456681683 DSYSSSRS(ph)DLYSSGR ddPTM_A549_MK2206_60min_R1 4 DSYSSSRSDLYSSGR 15 1 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 DS(0.015)YS(0.241)S(0.015)S(0.05)RS(0.679)DLYSSGR;DS(0.001)YS(0.008)S(0.008)S(0.043)RS(0.941)DLYSSGR;DSYSSSRS(0.999)DLYSSGR;DS(0.001)YS(0.05)S(0.012)S(0.073)RS(0.864)DLYSSGR 194.21 9.079799999999999e-36 136417200.0 9586.300000000001 10041.699999999999 9627.800000000001 10014.4 13783.900000000001 10556.0 10025.1 9545.4 15696.199999999999 15785.0 15931.2 True False 11204.233077467077 10552.779638431457 10993.1668121436 12467.928449563495 11756.306569421926 11673.028913494307 11846.53090300371 10898.48968156149 12141.035761680847 12219.157536841383 11975.04336124797 0.935631942154357 0.8812310168814041 0.918006430583643 1.0411593572938977 0.9817339457380262 0.9747796781487237 0.989268309569539 0.9101002270129327 1.013861528131918 1.02038524356274 1.0 13.547743259472838 -6.147983065953281 6.478659820902284 0.9962965400814868 0.9066535899812159 0.5213828698316646 0.03383375245352566 0.12984704108411282 6.56552256526324 0.004651055572061244 0.012479192613307067 7.112412458907329e-07 6.147983065953281 -0.0896429501002709 DSYSSSRS(ph)DLYSSGR ddPTM_A549_PD325901_60min_R1 2 DSYSSSRSDLYSSGR 15 1 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 DSYSSS(0.006)RS(0.992)DLYS(0.002)SGR;DS(0.002)YS(0.097)S(0.097)S(0.129)RS(0.675)DLYSSGR 185.14 2.0865999999999996e-33 29230000.0 5391.4 6117.4 5649.1 6527.4 6928.2 5754.7 6001.2 6221.9 6292.7 5742.7 5751.9 True False 5938.73095906109 6632.934767017165 6032.48189679791 6930.582673199021 6441.587132992464 5707.835631164704 6229.578949982643 6097.7993235138765 6028.239702453711 5380.104941944687 5044.452764298257 1.17727952595612 1.3148967939518181 1.1958644829608391 1.373901788168126 1.2769645061566088 1.1315073998831926 1.2349365215731685 1.2088128501609932 1.1950235207113316 1.0665388682042944 1.0 12.30048205507305 -10.738565743396686 0.3176153444985881 0.8955919707786744 1.2682486482047444 0.6023994291650046 0.0640995325843943 1.4248789097953034 0.18048545586912418 0.19108151798283413 0.02703442740654913 1.825720351036951e-11 10.738565743396686 0.37265667742607 DSYVGDEAQSK ddPTM_A549_MK2206_60min_R1 3 DSYVGDEAQSK 11 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;; 221.91 5.486199999999999e-39 285613300.0 19152.43 20692.15 19356.3 18648.41 24378.2 19196.42 18612.510000000002 19530.550000000003 26534.7 25923.6 26370.7 False True 22384.891952043312 21745.292051681437 22101.314398501756 23217.27128715895 20792.199073606273 21227.772422847698 21994.162142768222 22299.06527230087 20524.6328172088 20067.440755277887 19822.127395705396 1.129288068085626 1.097021102608427 1.1149819571480588 1.1712805000026958 1.0489388277320348 1.0709129246867237 1.1095762681624886 1.1249582260848612 1.0354404654696956 1.0123757331731023 1.0 14.274824186601062 -8.894882371477406 3.619878236543827 1.0147358794710304 1.107105287509506 0.6485785065772982 0.030473153809505667 0.10728731125749778 2.5850714732486733 0.0057650832466160885 0.006043935026146956 1.273848055638015e-09 8.894882371477406 0.0923694080384756 DSYVGDEAQSK ddPTM_A549_PD325901_60min_R1 3 DSYVGDEAQSK 11 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;; 256.38 5.2019e-62 451150000.0 40870.0 38038.0 40180.0 38744.0 42655.0 40180.0 41728.0 42035.0 43259.0 44128.0 45517.0 False True 45019.09231309618 41243.59575437263 42906.8564219681 41137.12888599179 39659.059951761454 39852.78740163655 43315.98187443774 41196.57894918042 41440.974667224735 41341.75054906843 39918.697556036066 1.1277695683808424 1.0331899154895205 1.074856121288461 1.0305228227510517 0.9934958397901098 0.9983488901583778 1.0851050892537943 1.0320121013805754 1.0381344383556543 1.0356487831556815 1.0 15.2847770295808 -2.000000035046807 0.7445689809793156 1.0220618518400415 18.031097744488335 0.4787110313994739 0.028102776862738255 218.74263971721078 0.9020492302290528 0.0046094433935090695 6242.955170970215 0.009999999193017485 2.000000035046807 17.009035892648292 DSYVGDEAQSKR ddPTM_A549_MK2206_60min_R1 2 DSYVGDEAQSKR 12 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ; 117.03 2.2998000000000002e-05 30787000.0 4694.2 6984.3 6395.6 5944.1 8187.200000000001 4487.5 3946.6 3197.1000000000004 10706.3 9618.0 11338.3 False True 5486.466197828768 7339.771037642717 7302.592249916452 7400.404766840794 6982.873725518258 4962.364271438584 4663.646134382145 3650.2987157081175 8281.340144447928 7445.287120008891 8522.687188839374 0.6437483948740255 0.8612038521435224 0.8568415205334932 0.8683182431629978 0.8193277039033496 0.5822534796228234 0.5472037200296733 0.4283037303643216 0.9716818136059839 0.8735844640360191 1.0 13.057092666143125 -8.951342411461171 24.999114610614864 0.9875069189172996 0.7111477172313312 0.3673359143121233 0.14184439706726826 79.27650740541762 40730.45365709518 0.026015296140324797 0.02769013255053577 1.118555631191701e-09 8.951342411461171 -0.2763592016859684 DT(ph)HEDHDTSTENTDESNHDPQFEPIVSLPEQEIK ddPTM_A549_PD325901_60min_R1 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 C9JJ34;P43487-2;P43487 C9JJ34 RANBP1 Ran-specific GTPase-activating protein 1 DT(0.167)HEDHDT(0.167)S(0.167)T(0.167)ENT(0.167)DES(0.167)NHDPQFEPIVSLPEQEIK 89.40299999999999 1.866e-08 15293000.0 754.36 827.96 1017.5 1232.6 1179.2 1045.1 1146.2 4717.4 776.33 1069.2 1416.3 True False 830.9420718695194 897.7350949258724 1086.5536687245526 1308.734902562292 1096.3770600191556 1036.589052101801 1189.8192682247072 4623.307756271293 743.7035498602967 1001.6905295291859 1242.1040786654194 0.6689794246246469 0.7227535198905758 0.8747686183367193 1.0536435110723283 0.8826772883615032 0.8345428293058708 0.9579062565377857 3.7221580990530305 0.5987449543353647 0.8064465343399032 1.0 10.278570349914062 -5.8872622991239565 1.0931674520606807 1.0520732352440627 0.6202853196667958 0.033761581992694745 0.8246528306393373 3.0188032242625242 5.181318753998529 0.12853807175515547 1.1593654795838857 1.2963960552816359e-06 5.8872622991239565 -0.4317879155772669 DT(ph)PLGK ddPTM_A549_PD325901_60min_R1 1 DTPLGK 6 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 DT(1)PLGK 71.342 0.05259400000000001 19371000.0 4502.9 5276.6 4600.4 4908.2 5404.0 4219.1 4562.1 4730.5 4747.4 5496.5 6088.5 True False 4960.031093140225 5721.27760022931 4912.610808452511 5211.3683666690295 5024.441682787926 4184.741048438146 4735.71321197691 4636.1464664945415 4547.883287528207 5149.450051961441 5339.653098181463 0.9289051183548745 1.0714699054471943 0.9200243383087208 0.9759750813107834 0.9409678101558901 0.7837102844496306 0.8868952954246714 0.8682486261276943 0.8517188671071327 0.9643791379846754 1.0 12.382530301895125 -6.999031644844999 19.813226222195276 0.9085465271515697 0.9748478717009064 0.23837601888439952 0.06525518414968273 3.8341993862795722 78353.63678132909 0.01119446922145613 0.02094301388592807 1.0022322078191863e-07 6.999031644844999 0.06630134454933667 DT(ph)SGLER ddPTM_A549_MK2206_60min_R1 2 DTSGLER 7 0 Q9H307 Q9H307 PNN Pinin 1 DT(0.991)S(0.009)GLER;DT(0.5)S(0.5)GLER 75.825 0.019030000000000002 9136100.0 429.41999999999996 583.7 504.01 476.87 1026.53 697.98 786.5899999999999 1115.77 1145.74 1291.74 1158.15 True False 501.8955976889843 613.4078368157229 575.4861967415713 593.7031714075081 875.5287968360685 771.8397803183734 929.5032212141213 1273.9338144023163 886.2317193708168 999.9350368476072 870.5493916860839 0.5765274233514892 0.7046215213908448 0.6610609371938876 0.6819867741882183 1.0057198422025664 0.886612279199312 1.067720258139352 1.4633676464180345 1.018014288258084 1.148625277781113 1.0 9.765782343043526 -6.807321489246461 1.647151127398377 1.046903570108273 0.6401895889525883 0.6679952455109079 0.143373581226653 0.19468613659356204 1.0671766270592473 0.022292391900530888 0.05372195818571206 1.5583984613850497e-07 6.807321489246461 -0.4067139811556847 DT(ph)SGLER ddPTM_A549_PD325901_60min_R1 2 DTSGLER 7 0 Q9H307 Q9H307 PNN Pinin 1 DT(0.509)S(0.491)GLER;DT(0.841)S(0.159)GLER 76.827 0.018549 17108600.0 960.4 1308.88 911.27 1028.78 1017.07 1161.44 987.26 1013.8599999999999 1207.05 1384.87 1436.63 True False 1057.8991009908873 1419.1839111147597 973.1142621116684 1092.3254040710985 945.6345119010199 1151.9816177142054 1024.8307195494008 993.6377669422163 1156.3218861294445 1297.4290718566067 1259.9336175479075 0.8396466974583777 1.1263957809751806 0.7723535974899621 0.866970599766193 0.7505431228523143 0.9143192956119394 0.813400567518735 0.7886429515834666 0.9177641345739207 1.0297598649535784 1.0 10.299132008738619 -9.525257368511857 1.2105611177086 0.9814575793936242 0.8636181417332618 0.24697557267328363 0.09834859733241812 0.4541851223301811 1.3738239295535433 0.024788757864444087 0.018696066805837335 2.983613966784904e-10 9.525257368511857 -0.11783943766036242 DT(ph)TSPMELAALEK ddPTM_A549_PD325901_60min_R1 1 DTTSPMELAALEK 13 0 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 DT(0.503)T(0.104)S(0.392)PMELAALEK 49.31 0.014472 5545300.0 4112.5 3960.7 3807.8 4248.2 4621.8 3184.4 4087.8 4122.4 4443.9 4330.3 4914.4 True False 4529.997972537513 4294.48208907786 4066.220206161523 4510.601665637784 4297.180712344416 3158.4673021844565 4243.363465929989 4040.1754980397604 4257.13833707853 4056.88411898638 4309.959954948338 1.0510533786599445 0.996408814459469 0.9434473286678746 1.0465530336213649 0.9970349509653216 0.7328298488152231 0.984548234852649 0.9374044168092945 0.9877442903363491 0.9412811630253322 1.0 12.073458749552833 -5.341780475610337 3.2762330950739016 0.9732936486286763 1.0557475751591847 0.07855086165371095 0.07867090850084911 0.5864362452965435 10.083073569736284 0.010662651814841348 0.10698623240500037 4.552181027322664e-06 5.341780475610337 0.08245392653050843 DT(ph)VWEDAR ddPTM_A549_PD325901_60min_R1 1 DTVWEDAR 8 0 H3BQD4 H3BQD4 TSR3 1 DT(1)VWEDAR 48.79600000000001 0.036795999999999995 5567900.0 925.71 988.5 631.53 659.29 893.28 414.97 629.57 665.36 779.65 961.33 1162.2 True False 1019.6873977283158 1071.8043641410513 674.3894234983946 700.0128459437722 830.5390944487043 411.59062190286505 653.5286308639228 652.0888728351777 746.884021805908 900.6314597383954 1019.2567677928048 1.0004224940653998 1.0515548172047344 0.6616482174151087 0.686787537805264 0.8148477603413243 0.40381446060364395 0.6411815467059744 0.639768989954585 0.7327731788558848 0.8836158740340848 1.0 9.993301820913322 -5.74718581375906 24.988623383833687 0.7820077171570308 1.0259888131593815 0.3053643489492499 0.1564672415426282 296.21831185782304 519305.6259633457 0.02648837243491455 0.1016145960134586 1.7898399036227115e-06 5.74718581375906 0.24398109600235074 DTAAVVS(ph)R ddPTM_A549_MK2206_60min_R1 2 DTAAVVSR 8 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DTAAVVS(1)R;DTAAVVS(1)R 83.499 0.0033387 101507000.0 4241.4 3025.2 3385.3 2786.7 5090.6 3948.0 3745.1 4311.5 5087.8 5051.6 4544.9 True False 4957.244627725907 3179.169758326066 3865.386444374599 3469.441625099716 4341.779483477045 4365.774739529698 4425.536192640393 4922.668328414983 3935.4214235470854 3910.4400515114303 3416.2758971412004 1.4510668274404348 0.9305951433800915 1.131462024952148 1.0155624807712416 1.2709100828508382 1.2779338879459516 1.295427045673846 1.4409457773988215 1.1519624122982324 1.1446499548774018 1.0 11.73820877582786 -9.835303766780674 1.1907293637028196 1.0270479954966938 1.2104335059341491 0.09927045594523065 0.1560093163680731 0.48743387324762744 1.4004757880730783 0.04536002688419688 0.02896168866019088 1.4611548138837205e-10 9.835303766780674 0.18338551043745532 DTAAVVS(ph)R ddPTM_A549_PD325901_60min_R1 2 DTAAVVSR 8 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 DTAAVVS(1)R;DTAAVVS(1)R 94.40899999999999 0.0025357 118269000.0 6301.0 5651.6 6200.0 5688.2 6703.0 5273.2 5372.1 5134.700000000001 6037.5 5848.6 7354.200000000001 True False 6940.672881448962 6127.880166291928 6620.769283628725 6039.547195160497 6232.204404094646 5230.2568075238905 5576.538205225917 5032.284380405773 5783.764870971805 5479.318397871677 6449.680022114822 1.076126700495313 0.9501060742983374 1.0265267828678737 0.9364103605840829 0.966281177163132 0.8109327578407388 0.8646224597352032 0.7802378355439265 0.8967522188915247 0.8495488736005592 1.0 12.65501187280123 -6.383687105966955 1.833999749752111 0.9201750852580204 1.0152409520609318 0.3322044018065351 0.07196676927468398 0.4761333145084304 3.079980420059131 0.012079617406596497 0.03731618594774274 4.1334519554096497e-07 6.383687105966955 0.0950658668029114 DTASLSTTPSES(ph)PR ddPTM_A549_MK2206_60min_R1 2 DTASLSTTPSESPR 14 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 1 DTASLSTTPS(0.001)ES(0.999)PR;DTASLSTTPS(0.001)ES(0.999)PR 235.22 2.9357e-57 27132000.0 5101.8 5517.9 5140.4 4882.6 7550.2 5096.8 5283.5 5347.9 7885.6 8041.4 8054.4 True False 5962.859112965538 5798.737541143525 5869.386015615509 6078.837219188247 6439.575581689463 5636.139993017978 6243.44355926825 6105.981202256864 6099.524190715615 6224.842155005152 6054.270189868663 0.9849013879400206 0.9577929889629387 0.9694621864477501 1.0040578019396451 1.0636419221041007 0.9309363170559529 1.0312462713864594 1.0085412462223333 1.0074747243561546 1.0281738276930434 1.0 12.563737345834362 -6.264283022824952 8.417590299088015 1.0050835653012815 0.9693849030930819 0.2266696779580013 0.030989495895444922 0.12255422831042993 111.27559817142757 0.0038042736576554925 0.009377465789478562 5.441479246985278e-07 6.264283022824952 -0.035698662208199616 DTASLSTTPSES(ph)PR ddPTM_A549_PD325901_60min_R1 2 DTASLSTTPSESPR 14 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 1 DTASLSTTPS(0.001)ES(0.999)PR;DTASLSTTPS(0.064)ES(0.936)PR 278.53 3.781699999999999e-99 34869000.0 8251.599999999999 9514.3 8745.5 8965.2 9434.3 9935.8 9421.9 8554.5 10348.4 10510.5 11542.2 True False 9089.296357493133 10316.10345143876 9339.022220963707 9518.960042553515 8771.667314568118 9854.886139003991 9780.455560361504 8383.873786624574 9913.492735530373 9846.865236266853 10122.582572034169 0.8979226687272758 1.0191177377934395 0.92259284174819 0.9403687225878214 0.8665444072347458 0.9735545320450388 0.9662016082123287 0.8282346651127198 0.979344220211011 0.9727621549337572 1.0 13.305289790978573 -8.974541977495795 24.9999452395151 0.9908872219002819 0.9293615708037938 0.20718927353542327 0.049640490448320425 174.21013257506593 171077.20635024257 0.00826467829754983 0.008587992233794785 1.0603714413551596e-09 8.974541977495795 -0.06152565109648811 DTCYS(ph)PKPSVYLSTPSS(ph)ASK ddPTM_A549_MK2206_60min_R1 1 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 DT(0.127)CY(0.001)S(0.872)PKPSVYLS(0.001)T(0.003)PS(0.192)S(0.775)AS(0.029)K 96.44 4.3811999999999996e-07 2536500.0 1166.0 1277.1 1447.8 1159.2 1610.4 1308.6 1055.5 1236.2 1924.3 1960.4 1895.1 True False 1362.7922940369706 1342.0989350648606 1653.1198104054417 1443.2040520384649 1373.5122932839804 1447.0751834216223 1247.2706873867014 1411.4351357037224 1488.4491224756584 1517.5442784430695 1424.4943679007874 0.9566849295762788 0.9421581196159102 1.160495855691988 1.0131342633282918 0.964210406326887 1.0158518110212758 0.8755883599769844 0.9908323735836809 1.0448964601166646 1.065321360785305 1.0 10.476234202274945 DTCYS(ph)PKPSVYLSTPSS(ph)ASK ddPTM_A549_PD325901_60min_R1 1 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 DT(0.244)CY(0.004)S(0.737)PKPS(0.014)VYLS(0.028)T(0.13)PS(0.208)S(0.585)AS(0.048)K 64.002 0.00055163 4274400.0 1797.5 1665.3 1564.1 1351.0 2141.5 1793.6 1605.1 2240.9 1427.7 1729.4 1945.8 True False 1979.9808767504392 1805.6406753708573 1670.249231697369 1434.4482016563834 1991.0884277739335 1778.9935162661843 1666.1829588444218 2196.203491547957 1367.6987339604887 1620.205388858749 1706.478935442471 1.1602726735311573 1.058108973904606 0.9787693226135791 0.840589456959483 1.166781720196075 1.04249368645439 0.9763864787539256 1.286979549488846 0.8014741380946842 0.9494435326496707 1.0 10.736806890765875 DTCYS(ph)PKPSVYLSTPSSAS(ph)K ddPTM_A549_MK2206_60min_R1 1 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 DT(0.134)CY(0.006)S(0.835)PKPS(0.015)VY(0.004)LS(0.02)T(0.02)PS(0.102)S(0.402)AS(0.461)K 45.957 0.0073444999999999995 3390800.0 884.46 1195.1 1180.0 1193.1 1381.2 1210.5 1165.1 1313.8 1514.5 1248.9 1761.9 True False 1033.7352250291067 1255.925485315179 1347.3417435270217 1485.4095535602942 1178.0273096645765 1338.5943065351325 1376.7835887013223 1500.0351733437565 1171.4681681595312 966.7726226012799 1324.3716040337713 0.780547711745371 0.9483180411675098 1.0173441800045304 1.1215957432461052 0.8894990696542727 1.0107392082841717 1.0395749837190065 1.1326391843308548 0.8845464253321902 0.7299859191005633 1.0 10.371092267891967 -5.279048019503478 3.658452789653453 0.979260081462336 0.762169955481463 0.21785372150355475 0.10851846520316673 0.24037506065591843 5.905336991350056 0.011822628865566483 0.13774126291507152 5.259591084066168e-06 5.279048019503478 -0.21709012598087296 DTCYS(ph)PKPSVYLSTPSSASK ddPTM_A549_MK2206_60min_R1 2 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 DT(0.39)CYS(0.567)PKPS(0.042)VYLS(0.001)TPSSASK;DT(0.135)CYS(0.769)PKPS(0.096)VYLSTPSSASK 110.68 1.2179e-10 13058800.0 3917.0 4468.4 3892.8 3343.8 5132.3 4056.0 3976.7 3609.1000000000004 5615.5 5219.0 4693.7 True False 4578.093838544437 4695.822473920463 4444.857575594907 4163.031150108888 4377.3454687167 4485.203227845103 4699.214914761434 4120.700977405199 4343.598216110825 4040.0242752470826 3528.1247504701214 1.2975997625748374 1.3309683772646494 1.2598357172610268 1.1799557681610227 1.2407003091751279 1.271271155377216 1.3319299194664997 1.167957844136922 1.2311350996112147 1.1450911067440999 1.0 11.784685858511791 -11.008672349042905 0.35543900144864116 0.8758102105024461 1.2788956243080776 0.518086374978614 0.06411650694731907 1.089009391555061 0.1483752839439631 0.17306909517603586 0.017410350177250532 9.802292347826051e-12 11.008672349042905 0.40308541380563145 DTCYS(ph)PKPSVYLSTPSSASK ddPTM_A549_PD325901_60min_R1 2 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 DT(0.028)CYS(0.939)PKPS(0.033)VYLS(0.001)TPSSASK;DT(0.128)CYS(0.855)PKPS(0.016)VYLSTPSSASK 128.17 3.1286999999999997e-17 17053400.0 6104.2 6829.9 6605.7 6501.9 6477.6 6961.0 7470.0 7219.0 6013.9 8075.799999999999 8181.700000000001 True False 6723.893890325464 7405.47964253613 7054.0025253010135 6903.507596113723 6022.635722506857 6904.311923912196 7754.2749377408445 7075.011381804057 5761.156696900599 7565.892609775352 7175.402768069517 0.9370754656793254 1.0320646633928974 0.9830810552811428 0.9621073296169902 0.8393446217831194 0.9622194247598653 1.080674519379916 0.9860089545478616 0.8029035976262822 1.0544206164207968 1.0 12.808844099751866 DTDDIES(ph)PKR ddPTM_A549_MK2206_60min_R1 4 DTDDIESPKR 10 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0;D6RGH8 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 DT(0.002)DDIES(0.998)PKR;DTDDIES(1)PKR;DTDDIES(1)PKR;DTDDIES(1)PKR 102.87 0.0001619 116267000.0 14556.900000000001 14739.599999999999 13818.8 12404.2 17207.3 13582.8 12027.6 12604.8 18473.199999999997 18172.2 18350.0 True False 17013.748837964642 15489.782682078176 15778.513631738304 15443.229556845707 14676.128964372469 15020.122880467072 14212.85923222386 14391.569000581041 14289.049695638585 14067.087398858974 13793.188565764049 1.2334891788686422 1.1230023143832912 1.143935179056568 1.1196272336316209 1.0640127838750757 1.08895218889042 1.0304259355593435 1.043382313811197 1.0359497100695998 1.0198575428581298 1.0 13.751668382178682 -2.00000000000063 0.21890460184611735 0.9997754331463107 2.1330900556681067 0.9042587797443102 0.020249563236288712 8.239640206505642 0.09546078317295292 0.011591330648898751 3.340643088540246 0.00999999999998549 2.00000000000063 1.133314622521796 DTDDIES(ph)PKR ddPTM_A549_PD325901_60min_R1 4 DTDDIESPKR 10 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0;D6RGH8 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 DT(0.001)DDIES(0.999)PKR;DTDDIES(1)PKR;DTDDIES(1)PKR;DTDDIES(1)PKR 100.22 0.00019119999999999999 129160000.0 17740.4 16327.86 15968.150000000001 16448.050000000003 18083.600000000002 17077.5 16401.199999999997 18106.4 17815.5 18712.800000000003 21892.2 True False 19541.392348207788 17703.866064829646 17051.844683286457 17464.008692268144 16813.47032103326 16938.426502027072 17025.356641081016 17745.25364780399 17066.776490070108 17531.27061445357 19199.59818608988 1.0178021518369869 0.9220956549838688 0.8881354973168413 0.9096028220486838 0.8757199061183806 0.8822281767489787 0.8867558829130027 0.9242513033767779 0.8889132118626836 0.9131061204788643 1.0 14.228788497735389 -10.792752710081944 0.9320873958495891 1.002617123401313 0.9070461200957937 0.007383202751160778 0.045165353209898694 0.44393695489259016 0.6535959831738747 0.029621006426703303 0.006652637202825173 1.6115630077479713e-11 10.792752710081944 -0.09557100330551938 DTDGGPKEEES(ph)PV ddPTM_A549_MK2206_60min_R1 2 DTDGGPKEEESPV 13 1 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 DTDGGPKEEES(1)PV;DTDGGPKEEES(1)PV 162.72 8.0256e-19 53695000.0 8085.0 7938.4 7294.2 6531.2 9686.4 8114.8 8005.3 9007.4 10697.900000000001 9577.5 10251.3 True False 9449.550340728045 8342.430652352123 8328.62724206339 8131.34429319671 8261.543391496485 8973.502749831709 9459.759387718392 10284.22653400559 8274.842731035886 7413.93609813737 7705.619288513195 1.2263193893856834 1.082642463894917 1.0808511204905902 1.055248642418416 1.0721452854298172 1.1645401120723098 1.2276442727737797 1.3346398451499333 1.0738712128396006 0.9621466906870628 1.0 12.91169519319495 -8.983061195688316 15.767465386860847 1.0325792010272097 1.1507387523544657 0.37137974598146695 0.08338074563043187 1.908566745860448 1776.6410129225287 0.015730408315753765 0.016044144994034594 1.0397736427908922e-09 8.983061195688316 0.11815955132725597 DTDGGPKEEES(ph)PV ddPTM_A549_PD325901_60min_R1 2 DTDGGPKEEESPV 13 1 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 DTDGGPKEEES(1)PV;DTDGGPKEEES(1)PV 159.0 1.4338e-18 70841000.0 11159.2 11261.400000000001 11961.4 11592.8 13477.900000000001 10092.9 10638.3 11068.6 12100.8 11725.900000000001 14357.6 True False 12292.073769031145 12210.437699886736 12773.172533741388 12308.860926840951 12531.258800230828 10010.706768690326 11043.146328001128 10847.828089851284 11592.245457665535 10985.524672845388 12591.706220325219 0.9762039833163821 0.969720662651496 1.014411574590523 0.9775371749836645 0.9951994257937166 0.7950238509004676 0.8770174696559833 0.8615058118447038 0.9206254700378588 0.872441310226316 1.0 13.620186166086889 DTDS(ph)DREAGTETGGENNDKEEEEK ddPTM_A549_MK2206_60min_R1 2 DTDSDREAGTETGGENNDKEEEEK 24 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 DT(0.134)DS(0.866)DREAGTETGGENNDKEEEEK;DT(0.153)DS(0.847)DREAGT(0.001)ETGGENNDKEEEEK 92.632 4.3589e-08 11286900.0 1841.7800000000002 1749.8899999999999 1535.98 1800.98 2059.96 1778.04 1583.25 2253.1 2098.07 1898.88 1762.17 True False 2152.627436802239 1838.9519266154966 1753.8050603581642 2242.2201808490636 1756.9426128125108 1966.191012632569 1870.9060310800521 2572.483824829361 1622.860494929329 1469.921689170565 1324.5745555821495 1.625146299036494 1.3883340268508169 1.32405160054382 1.6927851825325224 1.326420325234419 1.4843943697592994 1.4124580781017573 1.9421208221071076 1.2251937711547563 1.109731183477653 1.0 10.371313334818447 -8.971327369040385 12.062576237786635 1.0991933683790824 1.5120000581931874 0.5344915369264245 0.17481800226495572 0.39216771206635453 163.76620120841133 0.030871305334800578 0.032228209469225194 1.068249334568623e-09 8.971327369040385 0.41280668981410495 DTDS(ph)DREAGTETGGENNDKEEEEK ddPTM_A549_PD325901_60min_R1 2 DTDSDREAGTETGGENNDKEEEEK 24 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 DT(0.113)DS(0.887)DREAGTETGGENNDKEEEEK;DT(0.107)DS(0.89)DREAGT(0.003)ETGGENNDKEEEEK 128.92 3.5857e-23 14304900.0 2212.6 2148.8999999999996 2204.5299999999997 1593.95 2120.69 1712.33 1818.96 1380.68 1798.03 1994.96 1719.78 True False 2437.2215231699693 2329.995344565205 2354.14266271581 1692.4046713768987 1971.7400503833321 1698.3853522012018 1888.1815181731047 1353.1412542774942 1722.4650519177544 1868.9978851379974 1508.2579625836438 1.6159182206437765 1.5448254889859332 1.560835560704196 1.1220923166736092 1.3072962976477474 1.1260576070766237 1.2518956073924201 0.8971550542717276 1.142022846653615 1.2391765410847932 1.0 10.5586674835023 -5.872003364221952 0.4899420095731783 1.0512519728460112 1.8702312498591123 0.709447072317009 0.1206317860349484 0.8397893876693279 0.19216579124174915 0.021588783358581363 0.3524163027896522 1.3427545595738336e-06 5.872003364221952 0.818979277013101 DTDS(ph)DTQDANDSSCK ddPTM_A549_MK2206_60min_R1 1 DTDSDTQDANDSSCK 15 0 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2;A0A087WWE6;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 DT(0.001)DS(0.986)DT(0.013)QDANDSSCK 104.17 5.7638e-06 1678800.0 436.67 563.87 683.59 556.41 972.78 751.43 464.96 564.02 1007.6 725.44 1010.2 True False 510.3692204435027 592.5685745165006 780.5333410657937 692.7304749781941 829.6853506338736 830.9458238411349 549.4372134602752 643.9715622388076 779.3802088065653 561.5626001600388 759.3394598983571 0.6721226110280364 0.7803737403503567 1.0279109440332175 0.9122803588673253 1.0926408996905452 1.094300859792487 0.7235725817986876 0.8480680858136987 1.026392344882078 0.7395409165687344 1.0 9.568601171104586 -5.620312398450715 3.698508528333468 0.9873843886329411 0.690459993569618 0.24601193202121485 0.12909445222925262 0.14051769763340363 3.5503087525870742 0.014890385909182135 0.07057506643465662 2.3971080013529366e-06 5.620312398450715 -0.29692439506332313 DTDS(ph)DTQDANDSSCK ddPTM_A549_PD325901_60min_R1 2 DTDSDTQDANDSSCK 15 0 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2;A0A087WWE6;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 DT(0.006)DS(0.991)DT(0.002)QDANDSSCK;DT(0.005)DS(0.96)DT(0.035)QDANDSSCK 122.34 4.201600000000001e-07 4915400.0 1918.56 1729.25 1644.88 1519.87 1655.07 1730.22 1921.9699999999998 1745.6599999999999 1623.3400000000001 2011.9099999999999 2024.77 True False 2113.3307988307765 1874.9799663034025 1756.5114482669705 1613.7489180247871 1538.8235928815338 1716.1296619726127 1995.1116200923398 1710.841441856223 1555.1166651169146 1884.8776592452919 1775.7361260745454 1.1901153374079967 1.0558888445031787 0.9891736854787806 0.9087774328228326 0.8665834806679684 0.9664328144104951 1.1235405929949442 0.9634547705228146 0.8757588710855742 1.061462697958404 1.0 10.79420149817023 -5.420500827693684 1.73823136986058 0.9497039343148069 1.2283608161921502 0.41053310979871693 0.07409294902656381 0.43489505201259193 1.6351999002958304 0.01066088105776002 0.17951195168076794 3.797512152274334e-06 5.420500827693684 0.2786568818773433 DTEEPLPVKESDQTLAALLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DTEEPLPVKESDQTLAALLSPK 22 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK 273.96 5.112499999999999e-125 161008000.0 24287.0 26310.0 24977.0 24732.0 42434.0 30414.0 29800.0 31607.0 41777.0 36385.0 35128.0 True False 28386.05183985926 27649.066620904003 28519.114176334264 30791.341110261656 36192.01481197991 33632.38929282073 35214.27426255204 36087.38904237792 32314.576204160287 28165.60322952005 26404.748116520972 1.075035888037827 1.0471248011490966 1.0800752217170506 1.1661289467478795 1.3706631342313478 1.2737250567361993 1.3336341671261431 1.3667007495443102 1.2238168704189094 1.0666870634489158 1.0 14.688509758687287 -4.147728875527716 14.259735117605683 1.1589123580484868 1.1574152495556753 0.0 0.13331248483739302 0.0 0.0 0.020648430186915485 0.0 7.116576537448279e-05 4.147728875527716 -0.001497108492811483 DTEEPLPVKESDQTLAALLS(ph)PK ddPTM_A549_PD325901_60min_R1 1 DTEEPLPVKESDQTLAALLSPK 22 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 DTEEPLPVKESDQTLAALLS(1)PK 277.73 1.8992999999999993e-139 67223000.0 14479.0 15247.0 15160.0 15805.0 19850.0 16956.0 15472.0 16268.0 18438.0 17211.0 17462.0 True False 15948.897421123567 16531.91819935116 16188.84876448572 16781.238954240664 18455.804478782433 16817.91595774389 16060.795426603265 15943.521978000885 17663.114979872156 16124.294522752367 15314.284700738219 1.0414392662005791 1.0795096553581929 1.0571077318227826 1.0957899296094273 1.2051365662473794 1.0981848833548975 1.04874603943004 1.0410882577644867 1.1533751216614585 1.0528924359082277 1.0 13.902590362692804 -11.052731904476351 1.3521840530913551 0.9999115449436766 1.098210112811647 0.1639746354900916 0.05027452999749238 0.4181276846420463 1.3614227168265973 0.03732365338464065 0.008276304593319118 8.856621716699829e-12 11.052731904476351 0.09829856786797042 DTEEPLPVKESDQTLAALLS(ph)PKESSGGEK ddPTM_A549_MK2206_60min_R1 2 DTEEPLPVKESDQTLAALLSPKESSGGEK 29 2 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 DTEEPLPVKESDQTLAALLS(0.972)PKES(0.021)S(0.006)GGEK;DTEEPLPVKESDQTLAALLS(0.996)PKES(0.002)S(0.002)GGEK 101.58 4.7663e-15 18998100.0 1853.7799999999997 2283.5 1990.1200000000001 1911.27 2246.5 1893.88 1908.43 1616.0300000000002 2307.4 2788.8 3434.3 True False 2166.652743430407 2399.720396382907 2272.348941210165 2379.5312358001706 1916.042825920555 2094.2891245442006 2255.167027881954 1845.1072013843134 1784.7775841606492 2158.8081430942834 2581.468528141879 0.8393101522682312 0.9295950619666115 0.8802543654660722 0.9217742575048703 0.7422297831768292 0.8112781936767031 0.8735984976370041 0.7147509959040281 0.6913807256233794 0.836271339185443 1.0 11.333976294316498 -4.122723311782066 10.969068465650864 0.8449515902846667 0.8379942188920505 0.0 0.09120517589745292 0.0 0.0 0.015826421611986816 0.0 7.538356781054884e-05 4.122723311782066 -0.006957371392616207 DTEEPLPVKESDQTLAALLS(ph)PKESSGGEK ddPTM_A549_PD325901_60min_R1 2 DTEEPLPVKESDQTLAALLSPKESSGGEK 29 2 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 DTEEPLPVKESDQTLAALLS(0.985)PKES(0.007)S(0.008)GGEK;DTEEPLPVKESDQTLAALLS(0.998)PKES(0.002)S(0.001)GGEK 112.05 6.4011e-16 24094000.0 3668.5 3560.5 4298.200000000001 3577.0 4596.5 4825.7 3724.9 5068.2 4717.2 4597.3 4144.8 True False 4040.9234193930342 3860.555830575836 4589.9016991762865 3797.9431660435826 4273.657697064152 4786.401099155733 3866.6531078434887 4967.110775074013 4518.9524885048795 4307.025693419875 3635.0158760519876 1.111665961630381 1.06204648403594 1.262690963584293 1.044821617166787 1.1756916180805783 1.3167483340827308 1.0637238569761307 1.3664619205099102 1.243172696514586 1.1848712193515263 1.0 11.827745949838993 -10.848646868814123 1.1487357107781613 1.0021198490712766 1.186978956697712 0.0 0.11502700209391545 0.45875492810981305 1.0940925499346366 0.06551315692348932 0.016788719548440717 1.4169454507131867e-11 10.848646868814123 0.18485910762643543 DTEEQNPETVNWEDRPS(ph)TPTILGYEVMEER ddPTM_A549_PD325901_60min_R1 1 DTEEQNPETVNWEDRPSTPTILGYEVMEER 30 1 E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768-2;P57768 E5RGS8 SNX16 Sorting nexin-16 1 DTEEQNPET(0.04)VNWEDRPS(0.453)T(0.453)PT(0.042)ILGY(0.012)EVMEER 40.146 0.01866 6115600.0 1325.2 1904.7 1844.9 1745.9 1824.9 2039.0 1798.5 1862.9 1899.2 2133.6 2221.8 True False 1459.7333284393223 2065.2157535452316 1970.1060082849401 1853.7402777734114 1696.725319563228 2022.395060028295 1866.9429016769623 1825.7429980832217 1819.3832286459058 1998.8841318775458 1948.5326851506236 0.7491449025021018 1.0598825307288025 1.011071573650636 0.9513519028448401 0.8707707766431793 1.0379066645587018 0.9581275776919521 0.9369835117454496 0.9337196355550308 1.0258406990607036 1.0 10.928172416481699 -9.991149361672589 0.006135191197514222 1.9380203306946122 5.864557350320935e-07 0.093268128255238 0.08031390824210186 16752.449956103617 34.11272260102791 5492.358195930475 5282.913138808399 1.0205884246535933e-10 9.991149361672589 -1.9380197442388771 DTEQKELDQDMVT(ph)EDEDDPGSHK ddPTM_A549_MK2206_60min_R1 2 DTEQKELDQDMVTEDEDDPGSHK 23 1 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 DTEQKELDQDMVT(1)EDEDDPGSHK;DTEQKELDQDMVT(1)EDEDDPGSHK 115.18 3.5569e-15 25727000.0 6850.1 6963.3 6259.6 7567.0 9247.3 6956.2 6592.299999999999 7975.0 9980.1 10067.2 9211.0 True False 8006.229411134346 7317.7022273409675 7147.305404899778 9420.915339695533 7887.034419824233 7692.3004668481435 7790.035577886636 9105.480672413194 7719.623284944823 7793.0125280259435 6923.654489332574 1.1563588887154492 1.056913258542221 1.0323024373778023 1.360685365540777 1.1391432706493312 1.1110173794344937 1.1251334955967134 1.3151263810812928 1.1149636794901618 1.125563463635109 1.0 12.75731801644871 -9.91675383284454 1.0004948079866025 1.0154488413215401 1.156503187576866 0.08044814896048824 0.10000578375357876 0.4630544218914608 0.9436840887187197 0.03284368588706634 0.01840596461272409 1.2112845202910868e-10 9.91675383284454 0.14105434625532598 DTEQKELDQDMVT(ph)EDEDDPGSHKR ddPTM_A549_MK2206_60min_R1 4 DTEQKELDQDMVTEDEDDPGSHKR 24 2 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 DTEQKELDQDMVT(1)EDEDDPGSHKR;DTEQKELDQDMVT(1)EDEDDPGSHKR;DTEQKELDQDMVT(1)EDEDDPGSHKR;DTEQKELDQDMVT(1)EDEDDPGSHKR 171.08 3.4263e-41 288780000.0 8661.199999999999 9517.0 8314.29 8058.54 11079.900000000001 8569.43 8656.91 8126.9 11897.600000000002 12882.400000000001 13286.9 True False 10122.998813990574 10001.374649606367 9493.381343041758 10032.882661761605 9450.061387454782 9476.241394672748 10229.758490141934 9278.912962587434 9202.812596563119 9972.256892784635 9987.396030215288 1.013577391280474 1.001399626023519 0.9505361872425038 1.0045544035110558 0.946198724759198 0.9488200293653999 1.0242668318341854 0.9290622835537461 0.92144264317961 0.998484175716588 1.0 13.285892864182197 -4.854237147980334 0.770084832641 0.9629046236716536 1.0858539232102624 0.13253472262394728 0.03291506843760489 6.068529500606971 1.6722422065875757 0.005752298914423329 0.7419925224844304 1.3988232817729655e-05 4.854237147980334 0.12294929953860878 DTEQKELDQDMVT(ph)EDEDDPGSHKR ddPTM_A549_PD325901_60min_R1 4 DTEQKELDQDMVTEDEDDPGSHKR 24 2 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 DTEQKELDQDMVT(1)EDEDDPGSHKR;DTEQKELDQDMVT(1)EDEDDPGSHKR;DTEQKELDQDMVT(1)EDEDDPGSHKR;DTEQKELDQDMVT(1)EDEDDPGSHKR 160.99 7.162400000000001e-34 296773000.0 26171.2 24077.3 26298.5 26663.899999999998 29775.5 28954.7 27696.3 29224.6 29372.9 31190.6 31052.100000000002 True False 28828.080957780854 26106.378570291712 28083.274355727437 28310.868544889425 27684.17159989855 28718.902523100198 28750.2978524969 28641.692426744816 28138.459160011236 29221.220192978886 27232.888555480076 1.0585759530815462 0.9586342086740675 1.0312264267712519 1.039583755032568 1.0165712514667367 1.0545668875555652 1.0557197336568058 1.0517317091940013 1.0332528296690338 1.0730121460838828 1.0 14.733062394749684 -4.917133717300119 21.75331092440064 1.0225645861642183 3.3444837171690085 0.0 0.03108665364581658 1262.600619876296 484471.13992738974 0.003772612557556657 66743.93318044361 1.210225453255173e-05 4.917133717300119 2.3219191310047904 DTFEHDPSES(ph)IDEFNK ddPTM_A549_PD325901_60min_R1 2 DTFEHDPSESIDEFNK 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 DTFEHDPS(0.004)ES(0.996)IDEFNK;DTFEHDPS(0.011)ES(0.989)IDEFNK 117.65 4.3636e-08 10692000.0 3242.1 4272.9 3555.3 3770.8 4089.0 3551.4 3955.7 3928.8 3655.0 3978.0 4991.2 True False 3571.2356052921236 4632.992278743853 3796.5840377556788 4003.7137518918494 3801.8027462842024 3522.478575862918 4106.236328142099 3850.4370019160233 3501.393060604881 3726.828401110273 4377.314041823654 0.8158509010708982 1.0584098455073785 0.8673318846856062 0.9146507912472833 0.8685241017572307 0.8047123286579185 0.9380721348545009 0.8796346264230733 0.7998953301386045 0.8513961679472328 1.0 12.095830175682465 -4.963788915567229 17.364662360968957 0.9021108026950156 0.44894153314338514 0.0901618447245276 0.0743526073413303 21934213.495615017 269400785.1664305 0.011640022711150293 313547457.8225907 1.0869537981305816e-05 4.963788915567229 -0.4531692695516305 DTFWKGT(ph)TR ddPTM_A549_MK2206_60min_R1 1 DTFWKGTTR 9 1 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 DTFWKGT(0.949)T(0.051)R 54.343 0.007905500000000001 10481000.0 1883.3 2325.3 1951.1 1879.1 3738.8 3096.0 2391.4 2208.5 3744.5 2861.4 3480.1 True False 2201.1549977357 2443.647837840672 2227.795318470822 2339.4795843560037 3188.827472758412 3423.616665041526 2825.8864252170147 2521.561638247591 2896.376728737778 2215.007752671393 2615.8951241261852 0.8414538401920737 0.9341535963361486 0.8516378573147102 0.8943323311317706 1.2190196171658867 1.3087744357431579 1.080275122329675 0.9639383532586745 1.1072220373151562 0.8467494481114931 1.0 11.353088986455253 -6.651835497342252 9.133859015978791 1.0768276931929788 0.8803938495301509 0.3890537602700651 0.11747696079591084 0.20260521937986747 15.740763735860881 0.015168025295302104 0.03160494444977062 2.2292793988664178e-07 6.651835497342252 -0.1964338436628279 DTFWKGT(ph)TR ddPTM_A549_PD325901_60min_R1 2 DTFWKGTTR 9 1 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 DTFWKGT(0.992)T(0.008)R;DTFWKGT(0.79)T(0.21)R 69.86399999999999 0.0015113 21243000.0 4816.7 4328.5 4209.5 4316.700000000001 3791.1 4046.8999999999996 3476.7000000000003 3382.0 5959.8 5342.0 6266.1 True False 5305.687838132871 4693.27788587207 4495.181983779856 4583.332755062999 3524.8262145849912 4013.9433881454192 3609.00772102324 3314.543356872327 5709.330331762776 5004.705208328579 5495.40942408062 0.9654763510219279 0.854036073328104 0.8179885495122865 0.8340293509304431 0.6414128489024625 0.7304175318687834 0.6567313629460876 0.6031476640026414 1.0389272010825554 0.9107065228658308 1.0 12.424011254842364 -8.782254593213093 24.994781118434794 1.0183823321312317 0.7614778269498447 0.45492163249597306 0.10549207718222664 127.11140201308628 152633.9456674811 0.018399106017427183 0.019597426740656426 1.6509936647907709e-09 8.782254593213093 -0.2569045051813871 DTGKT(ph)PVEPEVAIHR ddPTM_A549_MK2206_60min_R1 4 DTGKTPVEPEVAIHR 15 1 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 1 DT(0.008)GKT(0.992)PVEPEVAIHR;DT(0.053)GKT(0.947)PVEPEVAIHR;DT(0.007)GKT(0.993)PVEPEVAIHR;DT(0.13)GKT(0.87)PVEPEVAIHR 139.46 1.6347e-10 68051000.0 3436.48 3395.7 3482.26 3160.02 4475.030000000001 3651.47 3297.13 3870.07 4872.41 4804.34 5545.700000000001 True False 4016.473810130502 3568.526625792616 3976.09683035119 3934.2250418586905 3816.7590150363962 4037.8661317503834 3896.1758422579933 4418.664274092305 3768.8169146399327 3719.036257240959 4168.549636466361 0.9635182882301546 0.8560595259740318 0.9538321903542663 0.9437875004395281 0.9156083885021998 0.9686501262758725 0.9346598174516985 1.060000398085211 0.90410748181344 0.8921655207621684 1.0 12.025329798728848 -7.263874186844908 24.377503167706482 0.9616359567433763 0.925116494246113 0.09840940774879126 0.05006096792672012 279.22041273373725 2795577.135318483 0.007429055921718872 0.012232898383455166 5.446604156586778e-08 7.263874186844908 -0.036519462497263344 DTGKT(ph)PVEPEVAIHR ddPTM_A549_PD325901_60min_R1 2 DTGKTPVEPEVAIHR 15 1 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 1 DT(0.163)GKT(0.837)PVEPEVAIHR;DT(0.024)GKT(0.976)PVEPEVAIHR 142.35 9.9367e-14 86262000.0 2527.4 2611.48 2672.1099999999997 3010.0 3131.2 2370.9700000000003 2673.3 3004.1 2553.3 2458.3 2920.8 True False 2783.9797874264577 2831.5585845898554 2853.455453302767 3195.920863794015 2911.2753140535806 2351.6616064125974 2775.0338943858897 2944.180868829139 2445.993680339929 2303.0825184638966 2561.5601164767027 1.0868297681241548 1.1054039162994629 1.1139521711587046 1.2476462462219484 1.1365242983474828 0.9180583314387288 1.0833374069716581 1.1493702021245988 0.9548843552827762 0.8990936826544875 1.0 11.322807035023796 -7.935534541638114 0.6976817032951007 0.9808307134998763 1.1333554755915352 0.36765561586380535 0.08161302227052829 0.531751102445458 0.5265694370614296 0.018181509937497828 0.03076892174641174 1.160019950221403e-08 7.935534541638114 0.15252476209165888 DTGLGDKPFPLDTAEEGPPSTAIQGT(ph)PPSVPGLGQEEHVMK ddPTM_A549_PD325901_60min_R1 2 DTGLGDKPFPLDTAEEGPPSTAIQGTPPSVPGLGQEEHVMK 41 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 DTGLGDKPFPLDTAEEGPPS(0.037)T(0.037)AIQGT(0.763)PPS(0.164)VPGLGQEEHVMK;DTGLGDKPFPLDT(0.004)AEEGPPS(0.149)T(0.149)AIQGT(0.548)PPS(0.149)VPGLGQEEHVMK 71.359 4.7167e-05 4790600.0 1474.92 1241.08 685.9000000000001 1579.28 1625.8400000000001 1244.28 1423.13 1421.8899999999999 1459.6 1616.2 1742.55 True False 1624.6527926212834 1345.6701671706383 732.4492986517647 1676.8285387948858 1511.646607243509 1234.1469962197184 1477.2879909166181 1393.529288498873 1398.2580878957265 1514.152856177583 1528.227396934565 1.063096235468711 0.8805431507574633 0.4792803087557306 1.0972375852954845 0.9891503124964812 0.8075676425480034 0.9666676529159699 0.9118599046804948 0.9149542081894744 0.9907902837069839 1.0 10.57764351391334 -11.191696381682654 0.19306651010526973 1.0943808047147683 0.8597153724532489 0.054569942837002006 0.15478438440392273 24.423809669395386 1.106339312390088 1.4311506558668683 0.21566789876802198 6.431371819000033e-12 11.191696381682654 -0.23466543226151937 DTGS(ph)PPASEGPTDGSR ddPTM_A549_MK2206_60min_R1 2 DTGSPPASEGPTDGSR 16 0 Q969R8 Q969R8 ITFG2 Integrin-alpha FG-GAP repeat-containing protein 2 1 DTGS(1)PPASEGPTDGSR;DTGS(1)PPASEGPTDGSR 203.27 1.3715999999999999e-39 16576500.0 1591.8600000000001 1666.42 1654.02 1387.18 1833.77 1807.5099999999998 1306.72 1168.0700000000002 2534.2 2470.1000000000004 2397.21 True False 1860.527050759599 1751.2336601446918 1888.584907312341 1727.0391622728757 1564.0248621804299 1998.7795084719676 1544.13410954235 1333.6474995643487 1960.207746285827 1912.102694441046 1801.9165973697684 1.0325267293033338 0.9718727618697459 1.048097847630174 0.9584456710115273 0.8679784982631351 1.109251955051392 0.8569398338393132 0.7401272076138566 1.0878459908450335 1.061149387952869 1.0 10.81531652148189 DTGS(ph)PPASEGPTDGSR ddPTM_A549_PD325901_60min_R1 2 DTGSPPASEGPTDGSR 16 0 Q969R8 Q969R8 ITFG2 Integrin-alpha FG-GAP repeat-containing protein 2 1 DTGS(1)PPASEGPTDGSR;DTGS(1)PPASEGPTDGSR 176.23 2.5859e-28 19800400.0 2175.9 1823.41 2185.7 1986.7 2021.76 2195.06 2194.4 1903.72 2402.5 2435.8 1969.0 True False 2396.7957661870814 1977.0751599579519 2334.034745681822 2109.4139468769317 1879.758552293358 2177.184159129825 2277.9090928217547 1865.7488111605512 2301.531279918803 2282.0031723037728 1726.8254825193872 1.3879779922463429 1.1449189162262408 1.3516332537996456 1.2215559523706816 1.0885631300453396 1.260801500307592 1.3191310389387774 1.080450126574736 1.3328105840556264 1.321501909373261 1.0 10.753906572377828 -10.93415939088419 1.0966788954747801 0.99486183349118 1.2445892570238652 0.0 0.13626335867951814 0.3726134253266536 0.7684888368376891 0.07367084868215176 0.015879456910679816 1.163698860658914e-11 10.93415939088419 0.2497274235326853 DTHEDHDT(ph)S(ph)TENTDESNHDPQFEPIVSLPEQEIK ddPTM_A549_PD325901_60min_R1 2 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 C9JJ34;P43487-2;P43487 C9JJ34 RANBP1 Ran-specific GTPase-activating protein 2 DT(0.02)HEDHDT(0.452)S(0.403)T(0.4)ENT(0.374)DES(0.332)NHDPQFEPIVS(0.019)LPEQEIK;DT(0.027)HEDHDT(0.689)S(0.366)T(0.355)ENT(0.308)DES(0.254)NHDPQFEPIVS(0.001)LPEQEIK 59.53 0.00074178 9759000.0 1728.75 1436.28 1756.37 1947.8600000000001 1942.0900000000001 2010.3500000000001 1469.98 1665.3 2031.37 1737.47 2072.06 True False 1904.2514273615134 1557.3203562250983 1875.5678301108044 2068.1748882889738 1805.6842982467788 1993.9783761294186 1525.9208933039204 1632.0842850974218 1945.9985831794613 1627.7658476815154 1817.2097558705564 1.0478985275143753 0.8569843691374225 1.032114110136004 1.1381046583134755 0.9936576074465019 1.0972747475561395 0.8397054266159326 0.898126526024263 1.0708717454838927 0.8957501149347036 1.0 10.827509240441387 DTHEDHDT(ph)STENTDESNHDPQFEPIVSLPEQEIK ddPTM_A549_PD325901_60min_R1 2 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 C9JJ34;P43487-2;P43487 C9JJ34 RANBP1 Ran-specific GTPase-activating protein 1 DT(0.136)HEDHDT(0.585)S(0.116)T(0.116)ENT(0.024)DES(0.024)NHDPQFEPIVSLPEQEIK;DT(0.021)HEDHDT(0.66)S(0.105)T(0.105)ENT(0.105)DES(0.004)NHDPQFEPIVSLPEQEIK 118.31 1.8901e-20 12870000.0 1335.62 1247.83 1176.6599999999999 1307.3899999999999 1547.4499999999998 979.22 1187.52 1085.8200000000002 1257.02 1415.0700000000002 1415.96 True False 1471.2111591685234 1352.9890133597662 1256.5152234313825 1388.1445110018794 1438.7624504126888 971.2455569793564 1232.711723435878 1064.1624682906893 1204.1918208048007 1325.7222387026425 1241.8058965099815 1.18473520161506 1.089533410303702 1.0118451095801209 1.1178433883291854 1.1586049433782217 0.7821234862138936 0.9926766549428843 0.8569475078846476 0.9697101811072948 1.0675760538973946 1.0 10.278223971886439 -7.2120066101732965 24.999995541763454 0.9624925290061046 1.1059393566700375 0.49752271200388787 0.08275505520623357 266.00620903068597 134529.21939794032 0.011207266682458333 0.01941153508994193 6.137526634795764e-08 7.2120066101732965 0.1434468276639329 DTIIDVVGAPLT(ph)PNSR ddPTM_A549_MK2206_60min_R1 2 DTIIDVVGAPLTPNSR 16 0 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 DTIIDVVGAPLT(0.999)PNS(0.001)R;DTIIDVVGAPLT(1)PNSR 288.41 1.6561999999999997e-109 61896000.0 3206.24 3890.7 3240.94 3473.49 4959.2 4223.0 4340.9 5053.700000000001 6804.7 5185.3 5235.0 True False 3747.374926958058 4088.7200114766683 3700.554025649546 4324.495205930891 4229.708249412513 4669.875056999474 5129.585340480276 5770.077451307157 5263.446314873 4013.937128652749 3935.005021350127 0.9523176988659364 1.0390634800445058 0.9404191368426413 1.098980860880103 1.0748927196949984 1.1867519943842937 1.3035778385665897 1.4663456386968992 1.3375958318515881 1.0200589597406764 1.0 11.942149761378916 -6.839732952935083 1.5836611141101928 1.2015900780677944 0.9882679231343795 0.37456536402650054 0.13024021546833975 0.4250344923007932 2.147438003038872 0.025010260035944386 0.06000579022725312 1.4463288429406588e-07 6.839732952935083 -0.2133221549334149 DTIIDVVGAPLT(ph)PNSR ddPTM_A549_PD325901_60min_R1 5 DTIIDVVGAPLTPNSR 16 0 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(0.805)PNS(0.195)R;DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(1)PNSR 213.71 2.7982999999999996e-46 129426900.0 7795.4800000000005 7821.389999999999 7901.94 8010.5999999999985 8722.169999999998 7949.070000000001 7464.719999999999 8363.58 8874.76 7289.599999999999 8279.91 True False 8586.871390870938 8480.525984470587 8438.213166625343 8505.39656860741 8109.554869052984 7884.335409425758 7748.79400445152 8196.761835798417 8501.784700009233 6829.333411949081 7261.533560673999 1.182514866745851 1.1678698326753232 1.1620428517088788 1.1712948094972322 1.1167826742510123 1.085767261632535 1.0671015894516218 1.1287921163360446 1.170797412002888 0.9404808715523167 1.0 12.8260585473099 -14.757881545102514 0.2922643081941769 6.655667363734443e-13 1.1504252803811896 0.7393042245066985 0.038458246951427924 18.96512627811284 0.28578663654537284 11.091121864630692 0.01576943850174627 1.7462983951895275e-15 14.757881545102514 1.1504252803805242 DTIIDVVGAPLT(ph)PNSRK ddPTM_A549_MK2206_60min_R1 2 DTIIDVVGAPLTPNSRK 17 1 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 DTIIDVVGAPLT(0.988)PNS(0.012)RK;DTIIDVVGAPLT(0.996)PNS(0.004)RK 140.95 2.3194e-16 12300500.0 2457.6000000000004 2663.3 2606.3999999999996 2047.89 4106.6 2756.3999999999996 2651.3999999999996 2433.3 4034.1 3667.2 3361.8 True False 2872.382797448764 2798.850594125944 2976.0267121430725 2549.6231419332757 3502.524579980127 3048.0804184497615 3133.1250597225 2778.227726668717 3120.382791133948 2838.7769730189866 2526.9722790400874 1.1366894766807203 1.107590541194672 1.1777045347223065 1.008963637267043 1.3860557984872788 1.2062183838469434 1.23987314214332 1.0994294435727143 1.2348306378411391 1.1233906270223681 1.0 11.30319412262473 -10.88112219493926 1.0347286628173749 0.9959523987425578 1.1812703421593755 0.13018459234053514 0.09826010602909623 0.4995914587811068 0.9146914799401005 0.06994540772234528 0.015386351356991889 1.3148548270051154e-11 10.88112219493926 0.18531794341681773 DTIIDVVGAPLT(ph)PNSRK ddPTM_A549_PD325901_60min_R1 2 DTIIDVVGAPLTPNSRK 17 1 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 DTIIDVVGAPLT(0.998)PNS(0.002)RK;DTIIDVVGAPLT(0.997)PNS(0.003)RK 161.22 1.4121e-22 13051700.0 3743.7 3980.7 4033.5 4314.3 4563.6 4821.0 4560.5 4057.8 4336.1 3886.2 5532.8 True False 4123.757668033725 4316.167559267863 4307.23756540588 4580.784512513792 4243.068479565314 4781.739374397457 4734.052323101354 3976.8639957174796 4153.868796193931 3640.8246687769583 4852.300675308926 0.8498561700880547 0.8895095024162061 0.8876691395740137 0.9440438297286993 0.8744446734631043 0.9854581763099468 0.9756304565359517 0.8195831754519807 0.8560617064253694 0.7503295678487941 1.0 12.244453235231195 -10.933331598637821 1.2156286510260854 0.9994987620716059 0.8968104596451808 0.0 0.0886759611349159 0.42236147906252486 1.1179401027120743 0.0356174511596967 0.008546882482092297 1.1659190581824026e-11 10.933331598637821 -0.10268830242642513 DTLEGAGDTSEVMDTQAGS(ph)VDEENGR ddPTM_A549_MK2206_60min_R1 1 DTLEGAGDTSEVMDTQAGSVDEENGR 26 0 Q9UBL3 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 1 DTLEGAGDTSEVMDT(0.016)QAGS(0.983)VDEENGR 53.073 0.0028885 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DTLRT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 DTLRTPPR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DTLRT(1)PPR;DTLRT(1)PPR 100.92 0.00092503 271190000.0 4318.0 4026.3999999999996 3354.5 2980.1 5922.9 4591.1 3795.5 4766.3 6443.1 4803.7 5052.3 True False 5046.772835035707 4231.326561855106 3830.21854123847 3710.2246337817705 5051.649256018189 5076.927154674468 4485.093220252226 5441.937621181569 4983.74813751646 3718.540833685458 3797.67447361361 1.3289113825054994 1.114188851955197 1.0085694726735999 0.9769727920495965 1.3301954370015767 1.3368515890314334 1.181010445053895 1.4329657949864747 1.3123157796024214 0.9791626058320755 1.0 11.890900531531624 -5.24644635114284 22.598955352656102 1.1723517637166772 1.328911813531992 0.07874607973661152 0.15810442083091358 1645.740869149019 2480457.2715806253 0.023523054584740532 0.6433161791558717 5.669616045647571e-06 5.24644635114284 0.1565600498153148 DTLRT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 DTLRTPPR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DT(0.015)LRT(0.985)PPR;DT(0.004)LRT(0.996)PPR 103.22 0.00085407 235650000.0 6817.9 7422.0 7085.9 7271.2 9070.4 5777.3 6392.799999999999 6076.8 7119.3 7537.4 8337.2 True False 7510.048188927297 8047.477987511268 7566.791784978193 7720.325509906653 8433.32639518127 5730.251584257711 6636.081502274384 5955.5934568426255 6820.100579032645 7061.487277659267 7311.777253865236 1.0271166541564498 1.1006185921838794 1.0348772291959727 1.0558753695382945 1.153389402107832 0.7837016070516262 0.9075880284463455 0.8145206356900863 0.9327555178773157 0.9657689276470153 1.0 12.836006405435691 -7.240084160336967 24.999899654780165 0.9381070493278971 1.0726112689401266 0.5697822917314812 0.07119362764802793 630.4792951960969 738083.1938713439 0.011564780807699628 0.020018839295575748 5.753284357434432e-08 7.240084160336967 0.13450421961222947 DTLRT(ph)PPRER ddPTM_A549_MK2206_60min_R1 8 DTLRTPPRER 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DT(0.003)LRT(0.997)PPRER;DTLRT(1)PPRER;DT(0.012)LRT(0.988)PPRER;DT(0.002)LRT(0.998)PPRER;DT(0.016)LRT(0.984)PPRER;DTLRT(1)PPRER;DT(0.001)LRT(0.999)PPRER;DT(0.036)LRT(0.964)PPRER 107.37 9.2603e-05 4686758000.0 12293.34 12656.500000000002 11148.26 9738.73 14542.69 11518.760000000002 10685.68 11660.68 16057.92 16869.079999999998 18083.319999999996 True False 14368.15524869335 13300.661789717655 12729.25090312928 12124.719287188205 12403.479565584947 12737.667537665939 12627.129738317695 13313.617099334808 12420.826759228987 13058.343111915117 13592.732569757629 1.0570468575730647 0.9785127251977428 0.9364747550062521 0.8920001349959907 0.9125081731675762 0.9370939560751663 0.928961831148779 0.9794658308040414 0.9137843840806515 0.9606856491069742 1.0 13.730547892207484 -5.324766928870171 2.7977603471434933 0.9477386250568357 1.069311414935584 0.5514285661851165 0.03024422273408342 0.28052795143857057 3.223214301836838 0.005413817753013129 0.07202180181777078 4.734052513551259e-06 5.324766928870171 0.12157278987874831 DTLRT(ph)PPRER ddPTM_A549_PD325901_60min_R1 12 DTLRTPPRER 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DTLRT(1)PPRER;DT(0.021)LRT(0.979)PPRER;DT(0.008)LRT(0.992)PPRER;DT(0.006)LRT(0.994)PPRER;DTLRT(1)PPRER;DT(0.006)LRT(0.994)PPRER;DT(0.004)LRT(0.996)PPRER;DTLRT(1)PPRER;DT(0.004)LRT(0.996)PPRER;DTLRT(1)PPRER;DT(0.02)LRT(0.98)PPRER;DT(0.082)LRT(0.918)PPRER 112.44 4.6316e-05 5216437700.0 15693.19 16462.329999999998 15369.920000000002 14201.31 17582.17 14000.869999999999 14708.504999999997 14600.220000000001 16026.94 17080.950000000004 18325.63 True False 17286.351096084116 17849.668323652164 16413.015198037236 15078.492665184902 16347.25903439365 13886.851556693653 15268.245206577769 14309.007158448992 15353.383446985152 16002.455901946834 16071.693685739849 1.0755774365847959 1.1106277081108062 1.02123743265467 0.9382018448101586 1.0171460055201467 0.8640565100500409 0.950008474845749 0.8903235364139089 0.9553058779740158 0.9956919422963836 1.0 13.97223435232492 -5.974190619448239 3.597625326282512 0.9625805441135143 1.0922054224667894 0.5964363346671435 0.04472937830860941 0.12616073506624145 3.4804321731958363 0.0064858985799682274 0.021630798220798175 1.0612296626911578e-06 5.974190619448239 0.12962487835327507 DTLS(ph)NPQSPQPSPYNSPKPQHK ddPTM_A549_MK2206_60min_R1 2 DTLSNPQSPQPSPYNSPKPQHK 22 1 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 DT(0.191)LS(0.798)NPQS(0.011)PQPSPYNSPKPQHK;DT(0.119)LS(0.582)NPQS(0.299)PQPSPYNSPKPQHK 97.346 2.2144000000000003e-07 8031900.0 1531.52 1941.05 1877.32 1599.51 2438.8 1915.58 1913.7 1818.5 3083.6 2992.0 3139.3999999999996 True False 1790.0031339309612 2039.8411541051196 2143.552205049278 1991.390021804732 2080.055750658825 2118.285404140906 2261.3945186659694 2076.2779439226833 2385.169523497345 2316.1051219657543 2359.8003369678286 0.7585400789589617 0.8644126039604549 0.908361682753036 0.8438807260971591 0.8814541290097218 0.8976545053225767 0.9582990913424889 0.8798532280025645 1.0107505648389363 0.9814835118388789 1.0 11.204449082786443 -7.596556782379019 0.4290608851509721 1.0136256924845732 0.8147495243204353 0.6699676518073814 0.04131933447009591 0.4510721095278189 0.16773110348754072 0.013560759076432104 0.03441293946857937 2.5318805797239305e-08 7.596556782379019 -0.1988761681641379 DTLSNPQS(ph)PQPSPYNSPKPQHK ddPTM_A549_PD325901_60min_R1 2 DTLSNPQSPQPSPYNSPKPQHK 22 1 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 DTLS(0.004)NPQS(0.996)PQPSPYNSPKPQHK;DT(0.073)LS(0.332)NPQS(0.593)PQPS(0.001)PYNSPKPQHK 85.46700000000001 1.0118e-05 11937400.0 1692.3600000000001 1766.9099999999999 1961.4 2089.0299999999997 2858.2 2905.9 2650.6800000000003 2652.38 2617.0 2481.8900000000003 3228.6 True False 1864.1671413504164 1915.813706671184 2094.512398856351 2218.0646385686396 2657.4498922547064 2882.2353138480753 2751.553077907751 2599.476200148142 2507.0165908626464 2325.183041838004 2831.502667781664 0.6583667261069173 0.6766067108007089 0.739717614498062 0.7833524805775226 0.9385298917400212 1.0179172164108035 0.9717642540889606 0.9180553596951746 0.8854014581687696 0.821183419071141 1.0 11.467352173764843 -6.531711799276646 1.8839119849257695 0.9505738029983893 0.6812503027904047 0.797587507985852 0.054788643186383504 0.09809922228574286 0.6882184832442214 0.007563807772163286 0.020650377771197763 2.939599742896771e-07 6.531711799276646 -0.2693235002079847 DTLSNPQSPQPSPYNS(ph)PKPQHK ddPTM_A549_MK2206_60min_R1 2 DTLSNPQSPQPSPYNSPKPQHK 22 1 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 DTLSNPQSPQPS(0.002)PY(0.001)NS(0.996)PKPQHK;DTLSNPQSPQPS(0.006)PYNS(0.994)PKPQHK 148.17 1.9063e-27 13224200.0 1713.8600000000001 2386.3 1955.28 1450.13 2490.0 1558.21 1578.98 1289.51 2601.9 2447.2 3201.9 True False 2003.1176681459697 2507.7524772886045 2232.568105325012 1805.4119150988101 2123.7242984830546 1723.098747943913 1865.8602273518275 1472.3019914587512 2012.5738043805122 1894.3758203457849 2406.7798620555814 0.8322812151316357 1.0419534070501921 0.9276162479680303 0.750135873896188 0.8823924165084318 0.715935335470295 0.7752517198470468 0.6117310580292492 0.836210172816393 0.7870997469323336 1.0 11.232888475313436 -4.306198958084211 20.0061418518376 0.8730689851642468 0.8496292010010921 0.0 0.12641128695076714 0.0 0.0 0.018295868588441285 0.0 4.940842862667278e-05 4.306198958084211 -0.02343978416315473 DTLSNPQSPQPSPYNS(ph)PKPQHK ddPTM_A549_PD325901_60min_R1 2 DTLSNPQSPQPSPYNSPKPQHK 22 1 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 DTLSNPQSPQPSPYNS(0.999)PKPQHK;DTLSNPQSPQPS(0.03)PY(0.002)NS(0.968)PKPQHK 148.17 1.9063e-27 14820700.0 1950.5700000000002 1796.73 2074.13 2094.7 1736.94 1892.6599999999999 1898.06 2046.21 2123.05 2354.3 2263.13 True False 2148.590430466259 1948.146742724484 2214.8929345569104 2224.084861591136 1614.9433265177 1877.2468044694233 1970.291711958286 2005.3967363293089 2033.8255916052492 2205.6490962126477 1984.779357163079 1.0825336442118791 0.9815432308350106 1.1159391226855269 1.1205703311878985 0.813663907118623 0.9458214071475651 0.9927006268215622 1.0103877436511124 1.0247111772223758 1.1112817594824576 1.0 10.954762920232131 DTLYEAVR ddPTM_A549_MK2206_60min_R1 1 DTLYEAVR 8 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 77.923 0.012123 4160500.0 1794.0 2104.2 1912.4 1828.8 2578.0 1952.5 1748.0 1964.2 3235.1 2775.5 2065.1 False True 2096.783340911084 2211.294792235127 2183.6070765432837 2276.856082097952 2198.7796150559507 2159.1122540353936 2065.588973521511 2242.6313651102187 2502.3550153931333 2148.512622331534 1552.2786761394736 1.350777649104732 1.4245475546534145 1.4067107344242644 1.4667830700093791 1.4164850995211302 1.390930821394209 1.3306817939795728 1.4447350205748213 1.6120526899309764 1.384102387900411 1.0 10.60017186834261 -10.938273003528277 1.1786159122485016 0.9983197408195479 1.4404495942115776 0.13831528070465626 0.1304433719627471 0.1727918604052509 0.4239091493878694 0.06224297367355005 0.014365006502653245 1.1527284089715393e-11 10.938273003528277 0.4421298533920297 DTLYEAVR ddPTM_A549_PD325901_60min_R1 2 DTLYEAVR 8 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ; 110.31 0.00017765 9267500.0 3029.5 2595.0 3080.6 2688.8 3014.8 2854.9 3295.2 2943.8 3298.2 3731.0 3475.2 False True 3337.0526097999723 2813.6897571532922 3289.668041152684 2854.8810692921425 2803.050848495379 2831.6506409390777 3420.6006392026284 2885.083599633577 3159.588123799454 3495.424023263557 3047.7724311078623 1.0949152816461947 0.923195488099654 1.079368002537149 0.9367107071883303 0.9197047718803837 0.9290886064973609 1.1223280991354212 0.9466204137114174 1.0366876777118648 1.1468782864450853 1.0 11.573539469393275 DTMDLES(ph)SSSEEEKEDDDDALVPDSK ddPTM_A549_MK2206_60min_R1 2 DTMDLESSSSEEEKEDDDDALVPDSK 26 1 Q5JRA6-2;Q5JRA6;Q5JRA6-3 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 DTMDLES(0.271)S(0.243)S(0.243)S(0.243)EEEKEDDDDALVPDSK;DT(0.06)MDLES(0.312)S(0.285)S(0.285)S(0.058)EEEKEDDDDALVPDSK 83.088 6.1458e-07 23726800.0 2494.3 2731.35 2634.02 2589.9 4252.4 3059.3 2827.0 3318.1 4346.3 4100.8 3426.4 True False 2915.276860219909 2870.364048460894 3007.563643461901 3224.4256162650304 3626.8775931202163 3383.0330954010146 3340.6293067192837 3788.450836255075 3361.869989614902 3174.4264318707073 2575.530316170789 1.131913238184765 1.114474960919293 1.1677453860971998 1.2519462869530487 1.4082061353921607 1.3135287416965038 1.2970646416952365 1.470940105992468 1.3053117521106163 1.2325331260671537 1.0 11.330653806564426 -10.63937671839746 0.9916663739122346 1.0054001919043611 1.2754585362873805 0.10482291050717063 0.12261750045809643 0.3879477577680822 0.6994241541686115 0.07023898815656063 0.020471117002387625 2.294157772287123e-11 10.63937671839746 0.27005834438301934 DTMDLESS(ph)SSEEEKEDDDDALVPDSK ddPTM_A549_MK2206_60min_R1 1 DTMDLESSSSEEEKEDDDDALVPDSK 26 1 Q5JRA6-2;Q5JRA6;Q5JRA6-3 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 DT(0.001)MDLES(0.065)S(0.311)S(0.311)S(0.311)EEEKEDDDDALVPDSK 65.21300000000001 9.7839e-05 5770400.0 769.58 882.49 624.87 847.18 1277.6 982.31 1005.1 714.31 1220.6 964.74 901.17 True False 899.4662895754469 927.4049715804471 713.4859620997712 1054.7391380313552 1089.6667324264868 1086.2573921953947 1187.7136597748688 815.5656299826294 944.1360488976718 746.8045639589708 677.384617973275 1.3278516602084014 1.3690965914685653 1.0532951932603827 1.5570757145137417 1.6086381407460268 1.6036050470786614 1.7533815033008735 1.203991954264905 1.393796115008506 1.1024823182336192 1.0 9.403831416309133 -10.343404756023649 0.6676329256714999 0.9900763297569426 1.4420896591944148 0.37343587928168187 0.18963127929568485 0.6232641762412396 0.49507133533066344 0.1491834322029565 0.04200399602292657 4.5351874687280887e-11 10.343404756023649 0.4520133294374722 DTMDLESS(ph)SSEEEKEDDDDALVPDSK ddPTM_A549_PD325901_60min_R1 1 DTMDLESSSSEEEKEDDDDALVPDSK 26 1 Q5JRA6-2;Q5JRA6;Q5JRA6-3 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 DT(0.03)MDLES(0.074)S(0.428)S(0.386)S(0.082)EEEKEDDDDALVPDSK 84.073 3.6921e-07 35506000.0 2154.5 2038.9 1780.8 2084.2 2820.8 1839.9 2363.1 2346.7 2241.5 1997.4 2269.8 True False 2373.22325394093 2210.7252585201722 1901.6557968203274 2212.9363004383667 2622.676739231714 1824.9164644169002 2453.029063637938 2299.8932275494626 2147.297550026222 1871.2838231215837 1990.6289894476931 1.1921976754690933 1.1105661930169848 0.9553039802499552 1.1116769182851867 1.3175115770615722 0.9167536864432129 1.2322884257395144 1.155360059429043 1.078703043816315 0.9400465044170676 1.0 10.959008643359445 -9.724150153182702 0.9400724536457705 1.0119378516042294 1.1189458988715058 0.19752459950845092 0.11019481022429949 0.6833185229675075 1.2553190592386123 0.03401814040634098 0.020925637959129283 1.8873387068896445e-10 9.724150153182702 0.10700804726727631 DTMDLESSSS(ph)EEEKEDDDDALVPDSK ddPTM_A549_PD325901_60min_R1 2 DTMDLESSSSEEEKEDDDDALVPDSK 26 1 Q5JRA6-2;Q5JRA6;Q5JRA6-3 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 DTMDLES(0.01)S(0.058)S(0.425)S(0.507)EEEKEDDDDALVPDSK;DTMDLES(0.05)S(0.043)S(0.417)S(0.49)EEEKEDDDDALVPDSK 163.89 1.5870999999999998e-41 38156000.0 5522.6 5066.7 5621.5 4674.4 6150.200000000001 4888.3 5733.6 6672.8 6161.5 5755.3 7462.0 True False 6083.250286476755 5493.688590585198 6003.0087948256205 4963.127071667355 5718.231169038174 4848.4913055107 5951.795285546305 6539.705769289669 5902.553582193423 5391.909375794356 6544.221305515326 0.9295606004873223 0.8394717009272344 0.9172991735115096 0.7583984159405704 0.8737832817815886 0.7408813179078308 0.9094734129070884 0.9993099964052481 0.9019489571996717 0.8239191683890905 1.0 12.676005821293055 -7.993552114749847 24.992728324575264 0.9557570180227212 0.8423954403157439 0.23479050542920643 0.07115509678051 117.33590398305884 454804.2051530992 0.009471719133099752 0.013069997092365579 1.0149575657311092e-08 7.993552114749847 -0.1133615777069773 DTMSDQALEALS(ph)ASLGTR ddPTM_A549_MK2206_60min_R1 1 DTMSDQALEALSASLGTR 18 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;H0Y9H6;P20810-5;F8W7E0;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 DTMSDQALEALS(0.449)AS(0.449)LGT(0.101)R 105.5 5.233600000000001e-09 2769600.0 804.18 1017.5 806.15 622.72 1184.0 1020.4 970.99 1256.0 1548.4 1430.1 1505.8 True False 939.9059236866648 1069.2864039061124 920.474191986702 775.2864279549632 1009.8351684353155 1128.3780507132985 1147.4063143018593 1434.0418463386804 1197.689872286708 1107.0394167524137 1131.8683020341973 0.8304021960836458 0.9447092051119264 0.8132343580365514 0.6849616925941083 0.8921843350683436 0.9969163803645477 1.0137277563473923 1.2669688193948145 1.0581530290531291 0.9780638036800208 1.0 10.144490388542653 -7.265115515103158 2.6656195847498707 1.0475546973702246 0.8244755935025533 0.5959266430375221 0.09156954865788687 0.1646106489622972 2.320619451164765 0.014356844717970788 0.025299176309455888 5.4310585516190506e-08 7.265115515103158 -0.22307910386767127 DTPRPDHPPHDGHS(ph)PASR ddPTM_A549_MK2206_60min_R1 4 DTPRPDHPPHDGHSPASR 18 1 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 DTPRPDHPPHDGHS(0.97)PAS(0.03)R;DTPRPDHPPHDGHS(0.945)PAS(0.055)R;DTPRPDHPPHDGHS(0.999)PAS(0.001)R;DTPRPDHPPHDGHS(0.999)PAS(0.001)R 123.29 6.727999999999999e-10 136835900.0 1860.21 1614.86 1386.2499999999998 1163.14 2125.9700000000003 1899.2920000000001 1838.23 1475.6100000000001 3128.81 3404.8100000000004 3245.2099999999996 True False 2174.1679702319993 1697.049476375257 1582.8410948850287 1448.1093522153396 1813.2426292554308 2100.273818792007 2172.2125965654714 1684.7822363660975 2420.139530682881 2635.661056256758 2439.334793760391 0.8912954366876307 0.6957017465237505 0.6488822686142961 0.5936492833699905 0.7433348771532098 0.8610026898170465 0.8904938355004833 0.6906728181287889 0.99213094359716 1.0804835248521656 1.0 11.252272063358124 -8.395521354849947 0.7173746464358883 1.0073045547147668 0.7112183012386253 0.567569873340288 0.10105410230301444 0.30987184926317146 0.3260264351560123 0.02449467307406226 0.030904512461850872 4.022338771259746e-09 8.395521354849947 -0.2960862534761415 DTPRPDHPPHDGHS(ph)PASR ddPTM_A549_PD325901_60min_R1 5 DTPRPDHPPHDGHSPASR 18 1 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 DTPRPDHPPHDGHS(0.994)PAS(0.006)R;DTPRPDHPPHDGHS(0.954)PAS(0.046)R;DTPRPDHPPHDGHS(0.996)PAS(0.004)R;DTPRPDHPPHDGHS(0.999)PAS(0.001)R;DTPRPDHPPHDGHS(0.959)PAS(0.041)R 99.441 2.01e-07 166557200.0 2690.58 2556.28 2534.4700000000003 3520.0299999999997 3570.93 3234.73 2736.3599999999997 3326.12 3180.6 3779.57 3464.6800000000003 True False 2963.725700899692 2771.7066868654424 2706.4743752062072 3737.4542585318413 3320.1201958397264 3208.3874313513115 2840.4936771936473 3259.7779273093374 3046.9304428344394 3540.927305174549 3038.546324416087 0.975376178103596 0.9121818102931432 0.8907135472836033 1.2300139143838995 1.092667295924063 1.055895513446833 0.9348199349040699 1.072808369290129 1.002759253117513 1.165335962371745 1.0 11.569165571442513 DTQSPS(ph)TCSEGLLGWSQK ddPTM_A549_MK2206_60min_R1 2 DTQSPSTCSEGLLGWSQK 18 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DT(0.017)QS(0.111)PS(0.291)T(0.291)CS(0.291)EGLLGWSQK;DT(0.01)QS(0.236)PS(0.346)T(0.346)CS(0.061)EGLLGWSQK 81.494 0.00023239 2304400.0 1365.05 1832.87 1034.51 1080.87 1814.45 1769.9 1820.96 1607.3000000000002 2306.4 1787.41 2864.5 True False 1595.4370677317024 1926.1552541792582 1181.2190738102872 1345.6831985220979 1547.546808587381 1957.1896432354638 2151.8048611119716 1835.1396971498093 1784.0040825639765 1383.6328395898422 2153.1655938218605 0.7409727669388437 0.8945690288317956 0.5485964838002209 0.6249789623163704 0.7187309759304167 0.9089824065790777 0.9993680315560525 0.8522984495086806 0.8285494100792202 0.6426040075876837 1.0 11.072243561992943 -7.253600367171417 5.2721989607267155 0.9179905025983519 0.701668759970957 0.27091470566801235 0.12418291002922952 0.11639278737077212 10.904395433026513 0.015526836528520676 0.026284919769126263 5.576987008727732e-08 7.253600367171417 -0.2163217426273949 DTREEDGADAS(ph)EEDLTR ddPTM_A549_MK2206_60min_R1 2 DTREEDGADASEEDLTR 17 1 Q86X53;E5RHA3 Q86X53 ERICH1 Glutamate-rich protein 1 1 DTREEDGADAS(1)EEDLTR;DT(0.012)REEDGADAS(0.988)EEDLTR 132.1 1.0906e-12 15050600.0 840.41 1106.72 1071.56 1212.69 1561.28 1264.44 1023.35 1091.03 1685.33 1674.74 1783.75 True False 982.2506619482072 1163.0473208166802 1223.5233209269616 1509.7991044397231 1331.6177802151103 1398.2422015326579 1209.279448543042 1245.686843639244 1303.6054459189852 1296.415070842556 1340.7956460044493 0.732587896504064 0.8674307112217612 0.9125352730470467 1.1260471414409061 0.9931549108048726 1.042845123863132 0.9019118253752363 0.9290654003474519 0.972262588861852 0.9668998215394368 1.0 10.388873653923872 -5.537818769536033 1.8922176663962018 0.9881954911859436 0.722907876171366 0.6385248454173531 0.05817664496635413 0.22339768690011302 1.2112938265227158 0.008051760551881863 0.08539762163382862 2.898552897326029e-06 5.537818769536033 -0.26528761501457765 DTREEDGADAS(ph)EEDLTR ddPTM_A549_PD325901_60min_R1 2 DTREEDGADASEEDLTR 17 1 Q86X53;E5RHA3 Q86X53 ERICH1 Glutamate-rich protein 1 1 DTREEDGADAS(1)EEDLTR;DTREEDGADAS(1)EEDLTR 99.93 5.592000000000001e-08 17860200.0 1295.54 1319.04 1131.04 1546.7800000000002 1341.81 959.9300000000001 1364.5 1317.28 1156.12 1412.63 1392.5 True False 1427.0622670738608 1430.2001299712833 1207.7991758960368 1642.3210876077426 1247.5658945932018 952.1126483437774 1416.4267941830506 1291.0058170138318 1107.5322969155989 1323.4363007190557 1221.2313277847877 1.168543775946555 1.1711132014321544 0.9890011404202055 1.3448075317448471 1.0215639463296302 0.7796333312795298 1.1598349648893558 1.0571345392486853 0.9068980394767391 1.0836901008096962 1.0 10.254120788703668 -6.983943977496512 24.845889730699188 0.9666427932703704 1.1591802229607 0.2868969607426539 0.12154879723009474 176.73594124453962 273488.4072282295 0.016073813912955204 0.03037058201369513 1.0376622620694307e-07 6.983943977496512 0.1925374296903296 DTS(ph)GLER ddPTM_A549_MK2206_60min_R1 2 DTSGLER 7 0 Q9H307 Q9H307 PNN Pinin 1 DT(0.14)S(0.86)GLER;DT(0.169)S(0.831)GLER 76.825 0.017504 282970000.0 1889.24 1750.0 1655.0500000000002 985.25 2405.1000000000004 1701.75 1734.55 1674.83 2415.15 2949.4 2802.7 True False 2208.097524516643 1839.0675251456476 1889.760976800336 1226.636294229553 2051.3129760167044 1881.8280554697744 2049.6952826211295 1912.242281451761 1868.1223812020417 2283.128491552739 2106.71223941509 1.048124885404236 0.8729562067082537 0.8970190334703763 0.5822514680838032 0.973703450161866 0.8932534877151742 0.9729355743384341 0.9076903079951147 0.8867477704124932 1.0837400803190043 1.0 11.04077755129917 DTS(ph)GLER ddPTM_A549_PD325901_60min_R1 4 DTSGLER 7 0 Q9H307 Q9H307 PNN Pinin 1 DT(0.446)S(0.554)GLER;DT(0.039)S(0.961)GLER;DT(0.014)S(0.986)GLER;DT(0.099)S(0.901)GLER 86.13600000000001 0.013288 360688300.0 4423.33 4934.96 4678.049999999999 5017.860000000001 4776.9 5087.719999999999 4661.9400000000005 4362.8 4273.55 5283.349999999999 5287.93 True False 4872.383205316559 5350.846398443629 4995.5306043998935 5327.8018158131 4441.387023410365 5046.287295148188 4839.352677811454 4275.78053144961 4093.947555170446 4949.758379337846 4637.548132950101 1.0506377649641927 1.1538093503387048 1.0771921845740646 1.1488402196752847 0.9577015474737616 1.0881369099533365 1.0435153531728367 0.9219916233472366 0.8827827631766589 1.067322265437952 1.0 12.179146540154676 -8.127923206881626 3.8471479039883656 0.9415079112441292 1.0795547772331517 0.35209807467640863 0.06698405046020903 0.1471533722271761 3.848256639502897 0.01019385492936434 0.01335703902849676 7.448636710598355e-09 8.127923206881626 0.1380468659890225 DTS(ph)PSSGSAVSSSK ddPTM_A549_MK2206_60min_R1 2 DTSPSSGSAVSSSK 14 0 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 1 DTS(0.999)PSSGSAVSSSK;DT(0.108)S(0.701)PS(0.166)S(0.024)GSAVSSSK 286.08 8.966499999999999e-100 822120000.0 13988.5 16331.2 15289.0 14653.7 26780.1 19534.4 20021.7 20975.0 28378.9 27591.3 27053.9 True False 16349.416814010421 17162.388323804927 17457.21009897003 18243.857157829596 22840.782765383963 21601.517242114733 23659.383724917396 23948.270483243465 21951.12446179104 21358.406167009918 20335.669980344654 0.8039772886663126 0.8439548999562421 0.8584526654810594 0.8971357804027658 1.1231881117003086 1.0622476300507226 1.1634425493620453 1.1776484623516488 1.0794394521059694 1.050292721491536 1.0 14.3117249022599 -6.627718531785073 4.552639247669365 1.0654397143445993 0.8420253274091395 0.8187238086321315 0.054347372460060085 0.09052328679070386 3.23832670154973 0.00974861518085113 0.02081575526171093 2.3565760966856246e-07 6.627718531785073 -0.22341438693545979 DTS(ph)PSSGSAVSSSK ddPTM_A549_PD325901_60min_R1 4 DTSPSSGSAVSSSK 14 0 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 1 DT(0.004)S(0.995)PS(0.001)SGSAVSSSK;DT(0.034)S(0.887)PS(0.067)S(0.012)GSAVSSSK;DT(0.16)S(0.79)PS(0.021)S(0.025)GS(0.003)AVSSSK;DT(0.096)S(0.816)PS(0.078)S(0.009)GSAVSSSK 313.9 1.8335999999999994e-136 1193440000.0 40384.0 39884.6 40211.0 39007.3 42516.0 38500.4 40430.1 40875.1 41415.2 41888.0 42236.5 True False 44483.7539508705 43245.815217015894 42939.96026838621 41416.69232899411 39529.82283223747 38186.86550716694 41968.6895796996 40059.814064604376 39674.663169237516 39243.1845313492 37041.67825923318 1.2009108669308814 1.1674907090970221 1.1592336601995834 1.1181105790926305 1.0671714860107366 1.0309161814947816 1.1330126374400515 1.081479456309971 1.0710816851109608 1.0594332215918771 1.0 15.176861844276724 -2.0000000000000213 0.13231052050235992 0.9812813020681047 1.69913861031577 0.6967359369752775 0.032506802088168266 25.699289458094828 0.2200369116729159 0.08421813028836944 3.4777102056384774 0.00999999999999951 2.0000000000000213 0.7178573082476652 DTSATSQSVNGS(ph)PQAEQPSLESTSK ddPTM_A549_MK2206_60min_R1 2 DTSATSQSVNGSPQAEQPSLESTSK 25 0 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3;F8WAU5 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 DTSATSQS(0.003)VNGS(0.997)PQAEQPSLESTSK;DTSATSQS(0.002)VNGS(0.998)PQAEQPSLESTSK 191.92 4.353500000000001e-58 19899300.0 2213.6000000000004 2725.1 2477.1 2851.3 3906.8 2554.5 2841.4 2708.3 4074.9 3725.3 4015.8 True False 2587.20156267602 2863.7959501568025 2828.3900278735455 3549.868627999722 3332.1148953066663 2824.815494460136 3357.6456003226644 3092.209818820897 3151.9416562781603 2883.752142666785 3018.5660295583284 0.8570962295810951 0.9487272837877356 0.9369978990611615 1.1760115873692294 1.1038734494054503 0.9358137164465004 1.1123313412540954 1.0243969449538077 1.044185094980131 0.9553384336895657 1.0 11.559647644359837 -6.025086838070641 24.623121454842924 1.0369316896962575 0.912899409097542 0.4133197858246823 0.0689948228568236 423.45973548980834 415633.02652642987 0.008856404108222396 0.023556819332520632 9.43872128252159e-07 6.025086838070641 -0.12403228059871552 DTSEDIEELVEPVAAHGPK ddPTM_A549_MK2206_60min_R1 1 DTSEDIEELVEPVAAHGPK 19 0 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 97.904 1.3187e-06 656450.0 348.76 422.61 422.54 443.56 780.83 363.03 305.2 499.83 708.42 530.44 511.59 False True 407.62216163665005 444.1190438867442 482.46252568636226 552.2322199121653 665.9709413592462 401.4455936401893 360.65088942721115 570.6824331651769 547.9640011142785 410.6132355934207 384.5480838342908 1.0600031017507352 1.1549116028832525 1.2546221031080853 1.4360550556016625 1.731827486224651 1.0439412144182727 0.9378564205318536 1.484034005513586 1.4249557445471677 1.067781255075404 1.0 8.587020193610906 DTSEDIEELVEPVAAHGPK ddPTM_A549_PD325901_60min_R1 1 DTSEDIEELVEPVAAHGPK 19 0 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 134.85 1.0229999999999999e-16 1253500.0 548.33 556.78 469.48 467.07 585.14 696.95 457.98 575.89 534.12 675.57 660.43 False True 603.9960579407891 603.70180461958 501.341736012583 495.9198531070665 544.0417850234132 691.274270273036 475.4086795162721 564.4034221730349 511.67279385233354 632.9143949065024 579.2012968107056 1.0428085387008155 1.0423005057892363 0.8655742636854479 0.8562132989649416 0.9392965589322858 1.1934957226087808 0.8208004404238153 0.9744512404941887 0.8834109948817299 1.0927364948793463 1.0 9.177921022341353 DTSENADGQS(ph)DENKDDYTIPDEYR ddPTM_A549_MK2206_60min_R1 2 DTSENADGQSDENKDDYTIPDEYR 24 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2;Q68E03 D6REM6 MATR3;DKFZp686L22104 Matrin-3 1 DT(0.002)S(0.004)ENADGQS(0.981)DENKDDY(0.006)T(0.007)IPDEYR;DT(0.003)S(0.003)ENADGQS(0.994)DENKDDYTIPDEYR 69.42699999999999 4.5487e-05 6331400.0 1974.15 1994.44 1797.62 1922.64 2935.3 2268.4 2587.2 2407.2 3618.9 2740.0 3149.3 True False 2307.3382566664536 2095.9484770579934 2052.5495466093594 2393.686886310589 2503.5212583683983 2508.440582357945 3057.2607507407624 2748.427971740819 2799.224928195793 2121.032096987354 2367.2418937417297 0.9746947545860678 0.8853968335889315 0.8670637132756388 1.0111712253144776 1.0575688378052746 1.0596469203208603 1.2914864166704862 1.1610254021808375 1.1824836893923243 0.8959929708048512 1.0 11.208991418310033 -6.648781889276559 1.9022046615961576 1.1085392132664036 0.9071403428786666 0.39009376481499924 0.0998658226170368 0.23636920962528613 1.723660186767034 0.014231215639247887 0.03582520920758122 2.2450091258248114e-07 6.648781889276559 -0.20139887038773696 DTSENADGQS(ph)DENKDDYTIPDEYR ddPTM_A549_PD325901_60min_R1 1 DTSENADGQSDENKDDYTIPDEYR 24 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2;Q68E03 D6REM6 MATR3;DKFZp686L22104 Matrin-3 1 DT(0.002)S(0.001)ENADGQS(0.997)DENKDDYTIPDEYR 69.67399999999999 4.3271999999999995e-05 4169700.0 1783.9 1637.6 1866.9 1776.9 2102.2 1809.7 1711.4 1785.7 1530.0 1727.1 2377.8 True False 1965.0002147622292 1775.6062991577007 1993.599060581687 1886.655077367303 1954.5487241962944 1794.9624032041231 1776.5282635140134 1750.082812645451 1465.699420718322 1618.0506112512692 2085.3456741160994 0.9422899230340408 0.8514685700299133 0.9560041221591233 0.9047205462312554 0.9372780486500182 0.8607505343040746 0.8519106858708294 0.8392291188784545 0.7028568159758826 0.7759148189841959 1.0 11.026070834278052 -7.341701790889105 6.167911290183595 0.8539210775874986 0.9158717015370307 0.21724208430538017 0.0723186990109002 0.5393501957689254 33.56175794915113 0.01607001972330864 0.02582769653604136 4.5530058583068864e-08 7.341701790889105 0.0619506239495321 DTSGGIDLGEEQHPLGT(ph)PTPGR ddPTM_A549_MK2206_60min_R1 2 DTSGGIDLGEEQHPLGTPTPGR 22 0 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 DTSGGIDLGEEQHPLGT(0.913)PT(0.087)PGR;DTSGGIDLGEEQHPLGT(0.996)PT(0.004)PGR 156.69 1.2337e-32 19968200.0 2528.3 2404.5 2679.9 1748.23 3781.2 2334.2 1996.7 3008.6000000000004 3581.0 3110.5 3846.8999999999996 True False 2955.015228999718 2526.878779550119 3059.9501173542917 2176.546428481027 3224.9904889253526 2581.2034946834415 2359.474544296567 3435.078263451078 2769.9092176819295 2407.8358896639297 2891.6085609611855 1.021927818617834 0.8738661289307331 1.0582172700225887 0.7527112963580146 1.1152928969934124 0.8926531514436505 0.815973011060759 1.1879471896117364 0.9579129260708779 0.8326977316955905 1.0 11.497656551549273 DTSLDFRPVVS(ph)PANGVEGVR ddPTM_A549_MK2206_60min_R1 2 DTSLDFRPVVSPANGVEGVR 20 1 Q8ND24 Q8ND24 RNF214 RING finger protein 214 1 DT(0.002)S(0.002)LDFRPVVS(0.996)PANGVEGVR;DT(0.003)S(0.013)LDFRPVVS(0.984)PANGVEGVR 55.247 0.002283 11881300.0 1885.1100000000001 1898.13 1904.92 1672.97 2076.5 1956.12 1966.78 1698.04 3043.5 2550.3 2694.2 True False 2203.2704814854483 1994.7367094312629 2175.066300067367 2082.847725102478 1771.0496007229165 2163.1153200326316 2324.1184675873187 1938.7423700294034 2354.1521094708046 1974.1854587397258 2025.1557838627539 1.0879511092637826 0.984979390388689 1.074024189842164 1.0284876559617964 0.8745251179367748 1.0681229252925597 1.1476245363970605 0.9573299918347384 1.1624548235891896 0.9748314053026538 1.0 10.983817175356485 -7.483254258845378 24.974107367877096 1.0741767403145535 1.009002089122572 0.023927188500363572 0.080743195757924 879.2564445690642 554169.156441274 0.012421385970555027 0.01985494307632849 3.2865916017148855e-08 7.483254258845378 -0.06517465119198151 DTSLDFRPVVS(ph)PANGVEGVR ddPTM_A549_PD325901_60min_R1 2 DTSLDFRPVVSPANGVEGVR 20 1 Q8ND24 Q8ND24 RNF214 RING finger protein 214 1 DT(0.002)S(0.002)LDFRPVVS(0.997)PANGVEGVR;DTSLDFRPVVS(1)PANGVEGVR 92.833 8.1881e-07 11475400.0 2029.5700000000002 1813.4700000000003 2488.1 2268.8 2360.1 2123.69 2198.4 1701.98 2497.6 2417.1 3228.7 True False 2235.6104523095337 1966.2974812735195 2656.957428160746 2408.938623181349 2194.3347179029943 2106.3953727471767 2282.0613150106396 1668.0326737225203 2392.634557637961 2264.483893495133 2831.590368415617 0.7895246703923644 0.6944145252103461 0.9383269055429848 0.8507369745466546 0.7749477969621744 0.7438912761685178 0.8059291839898227 0.5890797949902083 0.8449790564080536 0.7997215694592853 1.0 11.46739685792203 -9.838574677080576 1.022904828878407 0.9766564563578489 0.7806665015208095 0.08787488871528715 0.10107225429126007 0.298959453011398 0.6400298864647525 0.02878759466427497 0.017172484022275027 1.4501913919728517e-10 9.838574677080576 -0.1959899548370394 DTSPDKGELVS(ph)DEEEDT ddPTM_A549_MK2206_60min_R1 2 DTSPDKGELVSDEEEDT 17 1 Q9UPU7 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 DTSPDKGELVS(0.769)DEEEDT(0.231);DTSPDKGELVS(0.997)DEEEDT(0.003) 179.74 7.554099999999999e-31 55659000.0 4947.5 6066.1 5347.9 5477.299999999999 7752.4 6192.6 6441.2 6225.8 8444.7 8542.7 9895.7 True False 5782.517045238346 6374.838579592012 6106.312635769622 6819.238745885342 6612.032229542183 6847.896821684802 7611.482663756724 7108.326215712863 6531.988933414852 6612.898136837181 7438.324582573918 0.77739509496336 0.8570261365747093 0.8209258103733659 0.9167707956521641 0.8889141843893817 0.9206235551655898 1.0232791778928916 0.9556353903089742 0.8781532535858442 0.8890305959932834 1.0 12.860761988171639 -2.580875754725363 0.2773444726576432 0.958620547515508 3.174417394254007e-15 0.5572550576369725 0.0460915791340771 20.347578815390616 0.33843848314452746 0.020201322359988217 9.006664758986107 0.0026249694011785444 2.580875754725363 -0.9586205475155047 DTSPDKGELVSDEEEDT(ph) ddPTM_A549_PD325901_60min_R1 2 DTSPDKGELVSDEEEDT 17 1 Q9UPU7 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 DTSPDKGELVS(0.005)DEEEDT(0.995);DTSPDKGELVSDEEEDT(1) 198.95 1.4067999999999998e-47 97587000.0 14424.0 14463.1 14392.0 15815.4 16726.0 16098.0 16011.0 15567.2 17792.9 16920.0 16655.9 True False 15888.313861612425 15681.956195253864 15368.727666126551 16792.28133862055 15551.223461567497 15966.903225274893 16620.307366555375 15256.699983767858 17045.126289476495 15851.66831241473 14607.329890449308 1.0876946013248228 1.0735676070071627 1.0521243636850475 1.1495791129903778 1.0646178034039837 1.0930747333716693 1.13780598447511 1.0444550850969092 1.1668885701432052 1.0851858916925676 1.0 13.834404868035948 -11.077191743317462 1.405194282048321 1.0001439554914722 1.103856866438142 0.06170000103715523 0.04543099146385532 0.30081523898434387 1.062920204506179 0.0291052165523426 0.0064481953658664755 8.371595901226713e-12 11.077191743317462 0.1037129109466699 DTSPS(ph)SGSAVSSSK ddPTM_A549_PD325901_60min_R1 1 DTSPSSGSAVSSSK 14 0 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 1 DT(0.007)S(0.421)PS(0.553)S(0.017)GS(0.002)AVSSSK 82.171 0.00039723 2030100.0 1110.3 789.67 903.41 882.26 1312.5 870.88 1075.7 1130.5 999.28 1082.1 1059.2 True False 1223.0168386403404 856.2182622471063 964.7208352456488 936.755196442161 1220.3145278791908 863.7878420193434 1116.6363521456262 1107.9512906399073 957.2837366898061 1013.7760213276591 928.9251148220094 1.3165935758714864 0.9217301250501398 1.0385345598396252 1.0084291849743474 1.3136845030969093 0.929878876388064 1.2020735948770036 1.1927240129062513 1.0305284262588061 1.091343107374062 1.0 9.85941848839613 -8.964387165980941 18.202651591449246 1.0134671729781048 1.1065175302753463 0.04850331551349096 0.13123512969422899 15.893351011357927 8123.59523364347 0.020874873473624184 0.022079919927622177 1.0854575256451561e-09 8.964387165980941 0.09305035729724143 DTSQSDKDLDDALDKLS(ph)DSLGQR ddPTM_A549_PD325901_60min_R1 1 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E9PDE4;H0Y7F0;E7EQ12;E7EQA0;A0A0C4DGD1;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 DTSQSDKDLDDALDKLS(0.847)DS(0.153)LGQR 113.33 2.7205e-12 18503000.0 5833.1 5967.0 5300.3 5406.0 6592.4 5399.0 5422.6 6051.9 6297.6 5834.3 6909.6 True False 6425.272017898736 6469.86003118832 5660.010231293115 5739.916342083198 6129.372566545359 5355.032334032742 5628.960010360576 5931.190106876296 6032.933772493925 5465.921302312136 6059.76300356321 1.0603173777787354 1.0676754235081418 0.9340316160821742 0.9472179586409669 1.011487175808892 0.8837032621381269 0.9289076168574056 0.9787825206016619 0.9955725609972685 0.9020024874071991 1.0 12.565045655873503 -5.743223527786294 24.986090337934492 0.9787132519801385 1.0639964822774748 0.39090681278860095 0.04494341399450307 192.55539242419326 264117.633610043 0.0058348388155718255 0.022509064870393468 1.8062442277260173e-06 5.743223527786294 0.08528323029733631 DTSQSDKDLDDALDKLSDS(ph)LGQR ddPTM_A549_MK2206_60min_R1 2 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E9PDE4;H0Y7F0;E7EQ12;E7EQA0;A0A0C4DGD1;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 DTSQSDKDLDDALDKLS(0.146)DS(0.854)LGQR;DTSQSDKDLDDALDKLS(0.411)DS(0.589)LGQR 103.43 8.078799999999998e-11 13708100.0 3369.0 3387.9 3120.2 2947.17 4411.299999999999 4063.1 4429.3 4149.0 5367.1 5444.6 4619.2 True False 3937.604835858107 3560.329639109111 3562.691278095774 3669.226782303489 3762.403613613775 4493.054545132503 5234.046476212145 4737.133455779604 4151.460419497537 4214.6610785610765 3472.1251565655202 1.1340618953243666 1.0254036011279153 1.0260837721701939 1.0567668551248117 1.083602532731103 1.2940358836536996 1.5074475257076974 1.3643325750576851 1.1956540252149168 1.213856323868821 1.0 11.761603236909364 -7.0214034667417184 23.099741605996876 1.1653727814607961 1.0574252620292808 0.19097054432135574 0.13871205341691376 624.5739753470328 674074.5443942392 0.026074198300800593 0.045506112230767795 9.51911411699763e-08 7.0214034667417184 -0.10794751943151537 DTSQSDKDLDDALDKLSDS(ph)LGQR ddPTM_A549_PD325901_60min_R1 1 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E9PDE4;H0Y7F0;E7EQ12;E7EQA0;A0A0C4DGD1;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 DTSQSDKDLDDALDKLS(0.088)DS(0.912)LGQR 75.141 2.2717e-05 8749300.0 2840.4 2859.4 2857.1 2958.7 2854.1 2904.4 3061.3 2495.6 3048.8 3413.6 3095.1 True False 3128.7553170080364 3100.371673065172 3050.999987138006 3141.452179304767 2653.637862110477 2880.7475293507523 3177.7994467076396 2445.8233002396746 2920.6695384875943 3198.06471343138 2714.4223214554395 1.1526413160832087 1.1421847103743206 1.1239960572907821 1.1573188720391745 0.9776068525282496 1.06127462428401 1.1707092966299153 0.9010474460467355 1.0759819927068561 1.1781750717834567 1.0 11.406429483558016 -2.0000000000641682 0.19332750584781233 1.0108011567852961 1.7428400528839212 0.09238177741238529 0.08318346766822009 43.50599454324767 0.4751660979717663 0.05747901109817696 9.667590782280476 0.009999999998522472 2.0000000000641682 0.732038896098625 DTSSITSCGDGNVVKQEQLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DTSSITSCGDGNVVKQEQLSPK 22 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 DTSSITSCGDGNVVKQEQLS(1)PK;DTSSITSCGDGNVVKQEQLS(1)PK 169.01 1.3435999999999997e-40 44041000.0 5137.4 5706.700000000001 4822.6 4832.0 6571.9 5767.5 4371.7 4648.1 7755.3 7573.6 8162.9 True False 6004.467522629097 5997.14665471353 5506.517196892726 6015.840216916721 5605.182215743287 6377.813021843346 5165.981301798619 5306.982409209247 5998.736932669272 5862.718499906363 6135.826645421005 0.9785914546836265 0.9773983199458596 0.897436892387122 0.9804449448398568 0.9135170433679506 1.039438268126908 0.8419372971780168 0.8649172663914321 0.9776574990341295 0.9554895923080787 1.0 12.583042007834683 -8.978534230544927 24.02965118024245 0.990143108209993 0.9366810008122547 0.09145829597672117 0.055094812045660406 123.93060220554521 138735.31284464043 0.009402288032896052 0.009638321797116536 1.0506686392209818e-09 8.978534230544927 -0.05346210739773827 DTSSITSCGDGNVVKQEQLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DTSSITSCGDGNVVKQEQLSPK 22 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 DTSSITSCGDGNVVKQEQLS(1)PK;DTSSITSCGDGNVVKQEQLS(1)PK 251.19 2.2976999999999995e-110 99595000.0 11597.6 11474.1 14518.5 11900.6 12435.8 13648.2 12929.9 14320.2 10970.2 12984.5 16325.5 True False 12774.979814298133 12441.062675357449 15503.812716832836 12635.673033776427 11562.352309180988 13537.053584246296 13421.95442001277 14034.572377020422 10509.16064389812 12164.65645405137 14317.566995871142 0.8922591260080811 0.8689369275481768 1.0828524651781815 0.8825293457624654 0.8075640444019089 0.9454856113577168 0.9374465943748231 0.9802344477289802 0.7340046424737332 0.8496315370872284 1.0 13.8054987337989 DTSSS(ph)PTTGSTVQSVDLIFTR ddPTM_A549_MK2206_60min_R1 1 DTSSSPTTGSTVQSVDLIFTR 21 0 P57060 P57060 RWDD2B RWD domain-containing protein 2B 1 DT(0.002)S(0.013)S(0.072)S(0.428)PT(0.194)T(0.194)GS(0.047)T(0.047)VQS(0.003)VDLIFTR 75.764 0.00026389999999999996 2154800.0 558.9 573.47 818.2 801.79 887.36 945.66 879.37 1064.7 1541.6 1116.2 982.73 True False 653.2286562069145 602.6571735115859 934.2330631811935 998.2285859937202 756.8305194786846 1045.7291135216958 1039.1401462503486 1215.6244855069995 1192.430061429338 864.0496447654323 738.6910190317876 0.8843056695925587 0.8158447280183492 1.2647142568562775 1.3513479388203637 1.0245562758711655 1.4156515871715176 1.4067317991930697 1.645646764597646 1.6142474061648566 1.1697037360735127 1.0 9.528827227318926 -5.801385846599235 5.284586825699387 1.3219525583509046 0.847206623960552 0.46145376645084524 0.19684654763452006 0.14792095796893712 9.773098162669159 0.035565152900787156 0.12069749344413566 1.5798438118265518e-06 5.801385846599235 -0.4747459343903526 DTSSSPT(ph)TGSTVQSVDLIFTR ddPTM_A549_MK2206_60min_R1 1 DTSSSPTTGSTVQSVDLIFTR 21 0 P57060 P57060 RWDD2B RWD domain-containing protein 2B 1 DT(0.007)S(0.006)S(0.084)S(0.378)PT(0.451)T(0.058)GS(0.008)T(0.008)VQSVDLIFTR 74.678 0.00030683 1762400.0 832.59 651.53 433.19 744.85 942.6 526.09 814.61 726.7 1271.3 998.55 1289.5 True False 973.1108371288514 684.6900940903679 494.62285582921197 927.3382834375875 803.9447886546694 581.7604946097213 962.6140925173662 829.7119504254126 983.3525798489344 772.9768614769063 969.281561610504 1.0039506327882528 0.7063892693395768 0.510298426607202 0.9567274568772093 0.8294233796409783 0.6001976284817598 0.9931212257024064 0.8560071534289888 1.0145169564714 0.7974740179649875 1.0 9.92077199734996 -8.197189029281414 1.4357094677159004 1.0053491111493884 0.7686936080598609 0.10740622483909257 0.15762079112107147 0.31936730257767293 1.2874481852451052 0.024744732168441568 0.032973343293589835 6.3505446042045e-09 8.197189029281414 -0.23665550308952754 DTT(ph)SFEDISPQGVSDDSSTGSR ddPTM_A549_MK2206_60min_R1 1 DTTSFEDISPQGVSDDSSTGSR 22 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802 Q3V6T2 CCDC88A Girdin 1 DT(0.057)T(0.472)S(0.472)FEDISPQGVSDDSSTGSR 87.85 2.3861000000000003e-06 1064900.0 190.64 205.74 0.0 215.3 238.0 438.79 130.66 459.67 373.71 340.17 439.8 True False 222.81537129949226 216.211287213409 0.0 268.0485096651843 202.9905152766936 485.22246655477124 154.39923070956547 524.8296301803352 289.06528169224043 263.3253607416747 330.5855221374949 0.6740022063241488 0.6540252755638944 0.0 0.8108295485296523 0.6140332884640579 1.4677668381162827 0.4670477693979254 1.5875759675950107 0.8744039358505675 0.796542325988959 1.0 8.36887973352835 -6.813816621050266 2.2668976316951785 0.9853368142106648 0.47727089552258556 0.3065977748196256 0.3490277180973914 0.2618840576998208 2.7429956583282165 0.04613093506730006 0.10084366386915028 1.5352651049469966e-07 6.813816621050266 -0.5080659186880792 DTT(ph)SFEDISPQGVSDDSSTGSR ddPTM_A549_PD325901_60min_R1 1 DTTSFEDISPQGVSDDSSTGSR 22 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802 Q3V6T2 CCDC88A Girdin 1 DT(0.072)T(0.493)S(0.435)FEDISPQGVSDDSSTGSR 61.648 0.0014687 1835400.0 301.35 308.04 419.52 249.1 420.5 210.76 379.4 722.16 517.64 411.72 584.24 True False 331.9428301578551 333.99961186647414 447.9911499786972 264.4863412528535 390.9655306462474 209.0436404372553 393.838274615646 707.7559522764396 495.88539094158955 385.7239289354252 512.3821838025024 0.6478422565250677 0.651856411922422 0.8743300687273219 0.5161895741378856 0.7630349824906187 0.4079838195893071 0.7686416254618464 1.3813047655639097 0.9678037344341553 0.7528051152615846 1.0 9.001076501936248 -8.012634101820563 24.98492495306622 1.0170078147656414 0.6485728144285319 0.5040639222538296 0.17702420746933867 324.4234705120792 641573.1413527067 0.023725098920996796 0.03143760170095047 9.713279777849124e-09 8.012634101820563 -0.3684350003371095 DTTQSKPVS(ph)SPFPTKPLEGQAEGDSGECK ddPTM_A549_PD325901_60min_R1 1 DTTQSKPVSSPFPTKPLEGQAEGDSGECK 29 2 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 DT(0.031)T(0.031)QS(0.031)KPVS(0.448)S(0.448)PFPT(0.01)KPLEGQAEGDSGECK 46.32 0.0029006 5238800.0 1361.1 1289.6 1056.2 1339.7 1602.6 1224.1 1177.4 1319.3 1405.1 1223.2 1675.9 True False 1499.2778700111385 1398.2791178515943 1127.8800834465578 1422.4502263205447 1490.03890466986 1214.1313354490617 1222.2066012980013 1292.9855265291715 1346.048533366872 1145.9669432473827 1469.774924405406 1.0200731044705147 0.9513559488826255 0.7673828589114344 0.9678013978201415 1.0137871315723064 0.8260661651580671 0.8315603845210804 0.8797166865887617 0.9158194979489209 0.7796887293549255 1.0 10.521379527951138 -10.270144452396577 0.8924963690391432 0.9950400741541067 0.9055574155752757 0.0 0.099094314460023 0.741547914703954 1.148186560632115 0.03729059617039188 0.014608453869110978 5.3685320181440417e-11 10.270144452396577 -0.08948265857883098 DTTQSKPVSS(ph)PFPTKPLEGQAEGDSGECK ddPTM_A549_PD325901_60min_R1 1 DTTQSKPVSSPFPTKPLEGQAEGDSGECK 29 2 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 DT(0.02)T(0.02)QS(0.02)KPVS(0.182)S(0.718)PFPT(0.039)KPLEGQAEGDSGECK 46.898 0.0024864 3484400.0 1720.1 1861.9 1687.8 1409.7 2203.8 1924.4 1745.9 2099.9 1779.7 1954.0 1968.3 True False 1894.7232857293075 2018.8088473386185 1802.3442575658974 1496.7739673390097 2049.012690697267 1908.7283244327868 1812.3411798931384 2058.015847160318 1704.9053980734618 1830.624106528273 1726.211578081722 1.0976193821123865 1.1695025528574252 1.0441039096544462 0.8670860434167181 1.186999737873536 1.105732546733286 1.0498951593796684 1.192215295790866 0.9876572603968181 1.0604865184385919 1.0 10.753393588079318 -8.876339071685436 18.672755595492074 0.9941504210906079 1.0857444013154338 0.10700759392423531 0.08762425505467367 1.9403247420820766 307.35095506439194 0.014578393397309921 0.015519443094204157 1.3294160825105563e-09 8.876339071685436 0.0915939802248259 DTTS(ph)FEDISPQGVSDDSSTGSR ddPTM_A549_MK2206_60min_R1 1 DTTSFEDISPQGVSDDSSTGSR 22 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802 Q3V6T2 CCDC88A Girdin 1 DT(0.099)T(0.086)S(0.815)FEDISPQGVSDDSSTGSR 87.16 2.3771e-06 923520.0 0.0 0.0 244.21 230.36 475.17 331.03 280.64 204.86 623.53 390.83 287.96 True False 0.0 0.0 278.84265015824917 286.79821034125365 405.2731224538927 366.0593748800701 331.62865533700034 233.89953235743786 482.30145057280475 302.54123155677667 216.4515847083062 0.0 0.0 1.2882449002811516 1.3249993559887665 1.8723499899529292 1.691183621378323 1.532114702620028 1.0806090085810405 2.2282186162913167 1.3977316542379965 1.0 7.757900552775652 -5.8224973567716 3.4921134739077955 1.5617312523862967 1.764543348577975e-17 0.7520970700936378 0.3307251671974357 0.10689882396696045 2.584953708912232 0.06280187656166844 0.23997174143820152 1.5048826778793468e-06 5.8224973567716 -1.5617312523862967 DTTS(ph)PMELAALEK ddPTM_A549_PD325901_60min_R1 2 DTTSPMELAALEK 13 0 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 DT(0.022)T(0.164)S(0.814)PMELAALEK;DT(0.01)T(0.074)S(0.917)PMELAALEK 90.412 0.00018493 6286800.0 5391.5 6481.200000000001 6449.900000000001 5284.299999999999 6607.8 6102.0 6000.6 6286.4 6642.9 6514.799999999999 7614.4 True False 5938.841110987476 7027.393469773382 6887.629000399503 5610.699209483955 6143.690923672472 6052.307335111651 6228.956116654312 6161.012820414605 6363.722014307014 6103.4544161772765 6677.877071658523 0.889330703045197 1.052339447756269 1.031409971535892 0.8401920474541585 0.920006591577856 0.9063220646570684 0.9327748998391315 0.9226005142506241 0.9529558489950632 0.9139812474357839 1.0 12.705173820749405 -10.0182695350089 0.8596952843825525 0.995693170499912 0.9396687782391119 0.0 0.06187052860143251 0.8675906021392525 1.2949210781540081 0.024720620007990936 0.011685107736327485 9.588053860304862e-11 10.0182695350089 -0.05602439226080014 DTYLSHFNPR ddPTM_A549_PD325901_60min_R1 1 DTYLSHFNPR 10 0 P40261 P40261 NNMT Nicotinamide N-methyltransferase 0 90.10799999999999 0.0007189 2278200.0 482.77 623.87 438.47 648.64 825.02 698.45 526.74 632.33 741.43 544.23 749.17 False True 531.7804550035102 676.4457143719553 468.2272109343043 688.7050196316776 767.0734413644883 692.7620547703598 546.7853789431879 619.7176820967112 710.2702754922781 509.86722492112716 657.026839379914 0.8093740211669156 1.0295556799633458 0.7126454854967657 1.0482144386699037 1.167491790880923 1.054389277954264 0.8322116330273975 0.9432151701467564 1.0810369271407754 0.7760219132027049 1.0 9.359808495252953 -6.305090062118808 24.99373577825561 1.028438220472577 0.8684279573212675 0.12594279134223452 0.13044516610225576 393.8943885630494 225537.42873747536 0.014769201836479817 0.03432070768959233 4.95347457131118e-07 6.305090062118808 -0.1600102631513095 DTYSDRS(ph)GS(ph)SSPDSEITELK ddPTM_A549_MK2206_60min_R1 2 DTYSDRSGSSSPDSEITELK 20 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 DT(0.014)Y(0.014)S(0.014)DRS(0.486)GS(0.486)S(0.486)S(0.486)PDS(0.011)EIT(0.002)ELK;DT(0.033)Y(0.031)S(0.033)DRS(0.474)GS(0.463)S(0.463)S(0.463)PDS(0.037)EIT(0.003)ELK 48.111999999999995 0.0049025 9423000.0 2045.04 1886.31 1799.8899999999999 1700.9699999999998 2800.3 2341.46 2133.1000000000004 2254.1000000000004 3236.6 2810.7 2496.8999999999996 True False 2390.1927555723532 1982.3151219185638 2055.1414667430918 2117.7077263594447 2388.3795795349793 2589.231743064642 2520.6566587063694 2573.625577891733 2503.515267788139 2175.7609178840717 1876.8508190657358 1.2735123811077058 1.056192160709569 1.0949945759493587 1.1283303418934507 1.2725463075024117 1.3795618259918587 1.3430245137762782 1.37124674574447 1.3338914538952789 1.159261511773817 1.0 10.874098267197798 -4.883643584569106 18.2834267983123 1.1949567102326062 11.807820504028099 0.0 0.1298158401833358 1010.8137328353131 159076.66699335768 0.02221889068023993 688.9440201574217 1.3072432723327009e-05 4.883643584569106 10.612863793795492 DTYSDRS(ph)GSS(ph)SPDSEITELK ddPTM_A549_PD325901_60min_R1 1 DTYSDRSGSSSPDSEITELK 20 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 DTYS(0.001)DRS(0.903)GS(0.099)S(0.641)S(0.23)PDS(0.124)EIT(0.002)ELK 101.71 5.0864e-10 29658000.0 10909.0 12567.0 10756.0 9618.5 9137.0 8575.5 9639.2 8564.3 11765.0 10482.0 14066.0 True False 12016.473649218655 13626.06519389034 11485.966841082345 10212.612899801563 8495.248640938795 8505.663971197966 10006.025030772636 8393.478317936626 11270.557963889578 9820.164731130692 12335.97117172052 0.974100334861815 1.1045798506020574 0.9310954671662367 0.8278726301836187 0.6886566548091201 0.6895009604672793 0.8111258442068067 0.6804067714731837 0.9136336172482846 0.7960593125933072 1.0 13.590583678444181 -5.939773626057324 5.987804062198687 0.882154807492073 1.037359247863735 0.22306985723555328 0.11837438569580272 0.28364517851145565 20.147894624964653 0.020079837559974847 0.0637579272271469 1.1487522471383914e-06 5.939773626057324 0.15520444037166203 DTYSDRS(ph)GSSSPDSEITELK ddPTM_A549_MK2206_60min_R1 1 DTYSDRSGSSSPDSEITELK 20 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 DT(0.016)YS(0.014)DRS(0.737)GS(0.108)S(0.108)S(0.016)PDSEITELK 107.08 2.6831000000000003e-10 3724700.0 1148.0 1360.4 1151.7 1276.8 1935.6 1399.1 1014.7 1319.0 2158.7 1859.6 1667.6 True False 1341.7543340947182 1429.6385492617944 1315.0283779831109 1589.6160573177299 1650.875804073816 1547.1518333525846 1199.0578555104555 1505.972289268087 1669.757896735543 1439.5150684517098 1253.4888965813705 1.0704158112242343 1.1405274934312026 1.0490945564572423 1.2681532813358587 1.317024672955808 1.2342764563548339 0.9565763675933914 1.2014245147087559 1.3320883027280572 1.1484067169463463 1.0 10.291733501481772 -11.128739721577075 1.5072090565117149 1.0005594518432412 1.194814395908174 0.026659302881487768 0.11930573958801828 0.45630114041632464 1.8647228496016623 0.0873055211911753 0.019040167038361488 7.434645725503757e-12 11.128739721577075 0.19425494406493282 DTYSDRSGS(ph)SSPDSEITELK ddPTM_A549_MK2206_60min_R1 1 DTYSDRSGSSSPDSEITELK 20 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 DT(0.03)YS(0.026)DRS(0.182)GS(0.254)S(0.254)S(0.254)PDS(0.001)EITELK 66.868 0.00040276 4136900.0 1479.7 1922.4 1682.2 1194.8 2010.8 2156.4 1766.8 2012.8 2267.3 2427.0 2450.7 True False 1729.4371848083235 2020.2419487657098 1920.7612550518256 1487.5260536366097 1715.0139836906535 2384.588816697529 2087.804690170369 2298.120563941476 1753.7601701341066 1878.7390143752948 1842.1235541208691 0.9388280069160053 1.0966918827167624 1.04268861377677 0.8075061253676403 0.9309983469100817 1.294478218555511 1.1333684353038678 1.2475387759960683 0.9520317821304158 1.0198767667741484 1.0 10.84715411315949 -5.169082489449055 17.72515257287253 1.0195774450444588 0.9387525117911413 0.004374886729553662 0.1364258860605994 22041.019943874795 4217832.677444341 0.019460820616445135 206.64203108314555 6.7751280929961145e-06 5.169082489449055 -0.08082493325331752 DVAEVDT(ph)VRR ddPTM_A549_PD325901_60min_R1 2 DVAEVDTVRR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 DVAEVDT(1)VRR;DVAEVDT(1)VRR 80.69 0.00072322 4585600.0 822.3 842.47 619.94 754.54 894.7 962.6600000000001 898.9 858.3299999999999 571.72 663.8900000000001 869.08 True False 905.7792906547345 913.4679035487227 662.0128564020633 801.1462221153271 831.8593585474383 954.8204161289055 933.1081313969543 841.2099348031408 547.6925966098554 621.9718720998242 762.1886695520316 1.188392489732361 1.1984800352458715 0.8685682205052385 1.051112741660398 1.0914087177868375 1.2527349910489896 1.2242482323246537 1.1036767776901657 0.718578769915008 0.8160340043697863 1.0 9.57400435145066 -8.676826914520715 8.618250001635081 0.8672632221957012 1.1215573754891035 0.5253499408980358 0.116980162839712 0.200550269663604 18.374665440175786 0.024095554813934907 0.027310776942849228 2.1046170552359127e-09 8.676826914520715 0.2542941532934023 DVAEVDTVR ddPTM_A549_PD325901_60min_R1 1 DVAEVDTVR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 69.954 0.010458 1029600.0 438.51 261.58 298.61 356.29 229.37 339.57 340.79 384.4 412.86 411.85 428.68 False True 483.027212386 283.6242646150897 318.87547028780233 378.29722410670064 213.25984248354288 336.80465450407485 353.7589499374437 376.7328404440337 395.5089299593245 385.8457207132391 375.95507762641495 1.284800342199347 0.7544099853784286 0.8481743944010981 1.0062298572879314 0.5672482037746497 0.895864092674275 0.9409606918222622 1.0020687652964528 1.0520111404169945 1.0263080449644901 1.0 8.554416476258941 -8.08218773547753 2.482589666270432 1.024080803198558 0.8760698609291836 0.11196100354458027 0.16429554283066614 0.410633568751757 4.991614484119386 0.025382696738747795 0.03427439112656077 8.275843407753689e-09 8.08218773547753 -0.1480109422693744 DVAIKEPLVDVVDPK ddPTM_A549_MK2206_60min_R1 2 DVAIKEPLVDVVDPK 15 1 E9PKG1;Q99873-2;Q99873-3;Q99873;E9PQ98;E9PIX6 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 0 ; 111.43 2.281e-06 3578700.0 1983.46 1726.56 1693.01 1612.22 2360.78 2055.29 1829.1100000000001 2009.32 2671.6 2190.7400000000002 2344.6 False True 2318.2195570588083 1814.4345292659839 1933.1042756005775 2007.2139723753069 2013.5123893063562 2272.7794236089144 2161.4356106166647 2294.1472632844234 2066.4868656685385 1695.8503124649924 1762.3711123319022 1.3153980684530335 1.0295416876557817 1.0968769642636549 1.1389280942760336 1.1425019255122455 1.2896145469620524 1.2264361322608923 1.3017390305773313 1.1725605641221855 0.9622549419918192 1.0 10.783302037266386 -10.355009068498719 0.9180197861913075 1.0086687054902046 1.1849589645513132 0.4514775238602595 0.08689553287919492 0.43585528723893885 0.7057983246606929 0.04490243658087388 0.016610173156481077 4.415612270214975e-11 10.355009068498719 0.17629025906110862 DVAIKEPLVDVVDPK ddPTM_A549_PD325901_60min_R1 2 DVAIKEPLVDVVDPK 15 1 E9PKG1;Q99873-2;Q99873-3;Q99873;E9PQ98;E9PIX6 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 0 ; 146.78 1.1072000000000001e-13 6598000.0 3597.3999999999996 3223.2 3804.5 3865.7 3894.3 3802.5 4188.1 4351.6 3936.7 3924.7 3626.6000000000004 False True 3962.6053997340914 3494.8303758213824 4062.696248317015 4104.475509358309 3620.777802605665 3771.5337007148573 4347.480437316254 4264.803924235843 3771.254189243015 3676.893772206506 3180.551190911536 1.245886376882499 1.0988128050911121 1.277356031849517 1.2904918874083517 1.1384120503867636 1.185811349772348 1.3668952883824768 1.340900890519408 1.185723468315624 1.156055523556192 1.0 11.635061091519638 -10.04573274561148 0.8740219458873933 1.016486652890133 1.2369266377151757 0.281182783209305 0.08843334466495784 0.3100415613538479 0.47656397713152143 0.035200346603655445 0.01646950276922712 9.000512810769468e-11 10.04573274561148 0.22043998482504268 DVDASPS(ph)PLSVQDLK ddPTM_A549_MK2206_60min_R1 2 DVDASPSPLSVQDLK 15 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 DVDAS(0.099)PS(0.899)PLS(0.002)VQDLK;DVDAS(0.121)PS(0.879)PLS(0.001)VQDLK 176.23 1.4991999999999999e-27 7181500.0 2977.8 3810.5 3840.8 2649.4 5530.1 3695.1000000000004 4243.7 3830.6 5514.0 6006.5 5352.9 True False 3480.3798397798373 4004.4381740385684 4385.483193676767 3298.5031189360843 4716.629615679173 4086.1130293911306 5014.725358657457 4373.599280720499 4265.087804048635 4649.62747830458 4023.6271974756614 0.8649856631755929 0.9952309141738748 1.0899327841376871 0.8197834831729678 1.1722332572556142 1.0155297269972405 1.2463195799560132 1.0869792518214418 1.0600106805929885 1.1555810839586873 1.0 11.974280925474345 -5.3057585408440815 2.6881601732843357 1.0454403415357458 0.8384755883015337 0.2156809714020943 0.10728859629067107 0.47124822502174646 4.766472131844002 0.013435217035002582 0.20617092718850444 4.945855903809875e-06 5.3057585408440815 -0.20696475323421215 DVDASPS(ph)PLSVQDLK ddPTM_A549_PD325901_60min_R1 2 DVDASPSPLSVQDLK 15 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 DVDAS(0.004)PS(0.995)PLS(0.001)VQDLK;DVDAS(0.009)PS(0.99)PLS(0.001)VQDLK 170.78 3.2573e-27 12780700.0 7239.5 6888.4 6718.5 6816.4 7356.2 8203.1 6737.4 7031.7 6867.0 6991.3 8253.5 True False 7974.448710561784 7468.9096428419 7174.457811622513 7237.433546832393 6839.525889512309 8136.296673329135 6993.79544384674 6891.447227238063 6578.4038706357605 6549.868124857276 7238.371823247221 1.1016909472584056 1.0318494027695937 0.9911701121211489 0.9998703746591444 0.9448983910367863 1.1240506666427499 0.9662111334741076 0.95207145964857 0.9088237011406536 0.9048814132235232 1.0 12.821449503145807 -7.969863461176765 24.99948461151728 0.9555552925032621 1.026610005872462 0.39094350471036465 0.052696572379002896 204.95982780347182 170022.17020629655 0.008532103341693045 0.011788730240935855 1.0718562355739064e-08 7.969863461176765 0.0710547133692 DVDELPSLQPSVGS(ph)PSRPSSSR ddPTM_A549_MK2206_60min_R1 4 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPSLQPS(0.038)VGS(0.735)PS(0.142)RPS(0.02)S(0.028)S(0.038)R;DVDELPSLQPS(0.005)VGS(0.95)PS(0.046)RPSSSR;DVDELPSLQPS(0.023)VGS(0.891)PS(0.069)RPS(0.004)S(0.006)S(0.008)R;DVDELPSLQPS(0.303)VGS(0.669)PS(0.028)RPSSSR 148.1 1.2765e-27 162175000.0 10980.9 14132.0 11797.4 12129.800000000001 16927.800000000003 14077.3 11965.199999999999 13100.900000000001 20009.300000000003 19092.8 19111.0 True False 12834.20746277064 14851.258437347598 13470.4487161743 15101.601544527413 14437.743044121062 15566.950542244529 14139.121959942537 14957.992694823572 15477.225498286241 14779.723219474507 14365.21126323253 0.8934228134618206 1.0338350174744104 0.9377132343783654 1.0512620571880944 1.0050491273368305 1.0836562203639724 0.9842613311320618 1.0412650688339165 1.077410224929994 1.0288552635005732 1.0 13.81029158969637 -3.6789067853846134 0.6581478030797351 1.035803326693721 8.32605759318518e-18 0.45614684523480353 0.04046027150475005 14.105567747162326 0.8173754634931351 0.006796886147007791 17.46753828430541 0.00020945619730456075 3.6789067853846134 -1.035803326693721 DVDELPSLQPSVGS(ph)PSRPSSSR ddPTM_A549_PD325901_60min_R1 2 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPSLQPS(0.002)VGS(0.99)PS(0.007)RPSSSR;DVDELPSLQPSVGS(0.975)PS(0.025)RPSSSR 262.63 6.181899999999998e-124 276010000.0 13704.7 13844.800000000001 15504.4 15858.7 15302.199999999999 14940.599999999999 15124.3 15265.5 15366.4 16258.5 15824.3 True False 15095.991055133092 15011.54988432983 16556.621819531167 16838.255881279107 14227.426261724153 14818.928707140138 15699.863512834527 14961.017626946918 14720.603646095426 15231.93553530704 13878.011418502567 1.0877632680865703 1.0816787385198428 1.193011110904362 1.2133046568062233 1.0251775872410465 1.0677991435706065 1.1312761633776303 1.0780375643012121 1.0607141903968669 1.0975589424144285 1.0 13.760513238373505 -9.144413624244576 0.3618456314789958 0.9927657282232424 1.132230693020154 0.11418596832763872 0.05763574789562157 0.8561814918207604 0.2994139754295794 0.04384950801312519 0.02870161511776418 7.171109858286877e-10 9.144413624244576 0.13946496479691162 DVDETGITVAS(ph)LER ddPTM_A549_MK2206_60min_R1 1 DVDETGITVASLER 14 0 Q8WU90;H7C466 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 DVDETGITVAS(1)LER 191.06 1.5573e-26 6139600.0 927.24 1450.1 1228.7 1203.3 2458.4 1724.7 1859.6 1488.4 2294.8 2098.3 2308.8 True False 1083.7354431585247 1523.9038961221158 1402.9481358234325 1498.1085540181887 2096.772616622788 1907.206609236795 2197.4652489477116 1699.3852580338298 1775.0314640425843 1624.2925726673607 1735.4612403616384 0.6244653686029278 0.8780973384369922 0.8084007312840267 0.8632336575295743 1.2081932847926118 1.098962376618315 1.266213959632887 0.979212452869134 1.0228009838310765 0.9359428691872644 1.0 10.761103429164582 -6.575076258865102 7.342103924426144 1.0463831215516937 0.789791449830062 0.6009611863356186 0.10964043968105837 0.1246428627176033 14.555188966081182 0.015434807781468288 0.03233624097697066 2.660257897380903e-07 6.575076258865102 -0.25659167172163166 DVDETGITVAS(ph)LER ddPTM_A549_PD325901_60min_R1 2 DVDETGITVASLER 14 0 Q8WU90;H7C466 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 DVDETGIT(0.011)VAS(0.989)LER;DVDETGITVAS(1)LER 165.64 9.421e-20 15600500.0 916.8499999999999 1259.0300000000002 1192.2 976.46 1159.27 1038.66 1119.3000000000002 1141.83 1588.76 1214.77 1231.02 True False 1009.9279370507038 1365.13287666617 1273.1098612809944 1036.773716498439 1077.846874464389 1030.2014973266255 1161.8955740044623 1119.0553049016928 1521.9899422617257 1138.0692148860546 1079.612344078729 0.9354542327991912 1.2644657910345456 1.1792287002492396 0.9603203614563655 0.9983647189437738 0.9542327882567261 1.076215532711372 1.0365343736937558 1.4097559652863112 1.0541461674905255 1.0 10.076297662169852 DVDFELIK ddPTM_A549_MK2206_60min_R1 1 DVDFELIK 8 0 E7ENZ3;B7ZAR1;E9PCA1;P48643-2;P48643 E7ENZ3 CCT5 T-complex protein 1 subunit epsilon 0 117.04 0.0035242 927740.0 670.42 683.33 396.11 393.23 827.31 630.62 514.71 606.16 768.34 417.35 894.99 False True 783.5705058046876 718.1085782615858 452.2843542614307 489.57136765276545 705.6137949309301 697.3517898283233 608.2261444858447 692.085036287145 594.3122167868569 323.0703451378365 672.7392825325982 1.1647461745579262 1.067439641042203 0.672302578435376 0.7277282304813869 1.04886664604239 1.0365855063540643 0.9041038040711894 1.0287566881507466 0.8834213078051659 0.4802311289473153 1.0 9.393903692124647 DVDFELIK ddPTM_A549_PD325901_60min_R1 2 DVDFELIK 8 0 E7ENZ3;B7ZAR1;E9PCA1;P48643-2;P48643 E7ENZ3 CCT5 T-complex protein 1 subunit epsilon 0 ; 112.94 0.0038764000000000003 2542800.0 2407.2 2600.3 1997.15 1878.76 2364.73 2123.3 2374.96 2379.5 2551.1 2206.5 2534.42 False True 2651.5771719130203 2819.436406753642 2132.6886088385654 1994.8067382264576 2198.6395226756267 2106.0085487778715 2465.340402427977 2332.039005818361 2443.8861386892213 2067.1812134363554 2222.702407012081 1.1929519505391026 1.2684722875446626 0.9595025416405074 0.8974691042459537 0.9891740413559 0.947499108352936 1.109163509541553 1.0491908401508676 1.0995111765656795 0.9300305821035266 1.0 11.118099086527648 -5.7562654294913065 24.999969386607656 1.0273282518152695 1.2307121809834796 0.5963824053017346 0.07054520997169302 70.72677307127752 341732.48018715443 0.010030422634275185 0.036627665709677064 1.7528089031975679e-06 5.7562654294913065 0.20338392916821002 DVDFELIKVEGK ddPTM_A549_PD325901_60min_R1 1 DVDFELIKVEGK 12 1 E7ENZ3;B7ZAR1;E9PCA1;P48643-2;P48643 E7ENZ3 CCT5 T-complex protein 1 subunit epsilon 0 96.64 9.6848e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DVDIIDHHDNTYTVK ddPTM_A549_MK2206_60min_R1 2 DVDIIDHHDNTYTVK 15 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 116.84 8.8447e-07 11902400.0 1174.1599999999999 1492.7 1127.8600000000001 1039.44 2024.66 1235.1 1010.1 1255.85 1932.51 2162.0 1942.3 False True 1372.3295025441244 1568.6720541628054 1287.8075075037175 1294.1028466622354 1726.8351960508835 1365.7974622069733 1193.6220950538197 1433.8705833793235 1494.7995705843352 1673.6026984257878 1459.9733052470588 0.9399689005354086 1.0744525591838492 0.8820760645933816 0.8863880195694711 1.182785459052394 0.9354948185000211 0.8175643285832773 0.9821210964790085 1.023854042544554 1.1463241775797937 1.0 10.511726275178495 -8.529044192515867 22.686818866608316 1.0108288103651635 0.9613240513745228 0.10522819983927578 0.10187997868800541 125.34733455886064 461231.39862788207 0.015556101957551242 0.017672228130800317 2.957711483307241e-09 8.529044192515867 -0.04950475899064066 DVDIIDHHDNTYTVK ddPTM_A549_PD325901_60min_R1 2 DVDIIDHHDNTYTVK 15 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 114.74 1.0641e-06 18607800.0 2309.4 2769.4 2402.4 2448.2 3138.3999999999996 2857.6 2777.7 3132.3999999999996 2903.3 3227.0 3318.3 False True 2543.848587909575 3002.7870572101456 2565.441310804781 2599.4197537343866 2917.9696108922303 2834.3286530342616 2883.406893515763 3069.9218246797373 2781.284397497713 3023.2466692767352 2910.1701364368146 0.8741236658500797 1.0318252598409008 0.8815434117353302 0.8932191699682178 1.002680075078004 0.973939158246118 0.9908035469864933 1.0548942779127413 0.9557119574125972 1.0388556433261906 1.0 11.506887784125043 -6.770674963776597 24.99985748148989 0.9863346823820455 0.9253930832563904 0.3709421074627566 0.04855968703036602 187.88053969117368 508576.0916777951 0.006467288392866714 0.012344549893425075 1.695606357430096e-07 6.770674963776597 -0.06094159912565511 DVDLEFLAK ddPTM_A549_MK2206_60min_R1 2 DVDLEFLAK 9 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 135.79 0.00012484 3973200.0 1913.61 2199.3999999999996 1984.49 1698.49 2389.09 2390.05 2037.8000000000002 1847.6999999999998 3526.8999999999996 2452.3 2850.9 False True 2236.580584727348 2311.34006560305 2265.9205225524906 2114.6201262481127 2037.6580258083854 2642.9635046132116 2408.041882289549 2109.61713334393 2728.06278130198 1898.3237268036812 2142.9428491627664 1.0436958622583732 1.0785822246757888 1.0573872856374917 0.9867832579269582 0.9508690474897569 1.2333336400668828 1.1237079342691547 0.9844486212817778 1.2730450475465624 0.8858489751816497 1.0 11.06537765948807 -7.249921182181455 24.97956251015887 1.1259882931416592 1.0263725498280465 0.0 0.11199971476950554 1103.379854796348 2392903.5132369404 0.016423391359312065 0.028289891371059986 5.6244339081758925e-08 7.249921182181455 -0.09961574331361267 DVDLEFLAK ddPTM_A549_PD325901_60min_R1 2 DVDLEFLAK 9 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 149.94 6.519800000000001e-05 9207800.0 2165.16 2573.7 2784.5 2388.1 2687.6000000000004 2678.5 2789.5 2419.5 3134.2 2728.8999999999996 2635.96 False True 2384.9654492934515 2790.594731400934 2973.4729145587385 2535.60751323139 2498.8322477166594 2656.6871840538456 2895.6559489729702 2371.2411744389683 3002.480473474094 2556.596788283011 2311.753630727173 1.031669386215368 1.2071332750640644 1.2862412650881914 1.096832932164057 1.0809249802846161 1.149208613211163 1.2525798210002717 1.025732648549181 1.2987891242241285 1.1059123058363367 1.0 11.174771939132473 -11.119354405429114 1.4793683049794137 1.0002334485117645 1.177451419807533 0.09795347499385165 0.09701433869744949 0.39688538355393504 1.5576228031460335 0.06846189968081995 0.014884850500514621 7.597060667975235e-12 11.119354405429114 0.17721797129576844 DVDS(ph)RPEIQR ddPTM_A549_MK2206_60min_R1 1 DVDSRPEIQR 10 1 Q8IZR5-3;Q8IZR5-2;J3QRP2;Q8IZR5 Q8IZR5-3 CMTM4 CKLF-like MARVEL transmembrane domain-containing protein 4 1 DVDS(1)RPEIQR 40.066 0.028818 1080000.0 268.19 273.87 272.68 335.27 351.83 316.69 379.87 424.67 513.61 363.53 403.38 True False 313.4539153840265 287.80881320665077 311.3501242584307 417.41116505084216 300.07627306638284 350.20192559819145 448.8874618830757 484.86827299733073 397.2781550666338 281.4083205174498 303.2096132783599 1.0337862048465525 0.9492074149457441 1.0268477997516439 1.3766422526572077 0.9896660921199075 1.1549829235680946 1.480452605145395 1.5991190640522341 1.3102426099594502 0.9280982798494073 1.0 8.244171684738726 -6.075354038004965 9.276115014351232 1.2072889984790383 0.9905895539938977 0.1975026701481457 0.20045963903557024 0.5861911114954917 68.95834754811936 0.030004921850899154 0.07969114483493898 8.407095136115393e-07 6.075354038004965 -0.21669944448514056 DVDSRPEIQRLDT(ph) ddPTM_A549_MK2206_60min_R1 2 DVDSRPEIQRLDT 13 2 Q8IZR5-3;Q8IZR5-2 Q8IZR5-3 CMTM4 CKLF-like MARVEL transmembrane domain-containing protein 4 1 DVDSRPEIQRLDT(1);DVDSRPEIQRLDT(1) 69.594 0.006039500000000001 13017000.0 1259.15 1436.02 1411.6599999999999 1236.67 2011.96 1807.1599999999999 1507.25 1851.8899999999999 3473.7 2562.6 3180.8 True False 1471.663736738122 1509.1072842626593 1611.854614972334 1539.6542055162267 1716.0033492272958 1998.3924717042776 1781.0978148399854 2114.401078675269 2686.912496359037 1983.706880197004 2390.919574385956 0.6155220579161805 0.6311827885930598 0.6741567689018967 0.6439590114241488 0.7177168850056387 0.8358258860369703 0.7449425877478179 0.8843463834279315 1.1237987781538403 0.8296836503613746 1.0 11.223349886235669 -8.148866616436118 1.0959977227953213 1.059449312130359 0.6613612059525598 0.6459307797647134 0.09248856852585519 0.12291585538474824 0.29082423117546524 0.01411501974846669 0.019564794859264236 7.097957319282741e-09 8.148866616436118 -0.3980881061777992 DVDSRPEIQRLDT(ph) ddPTM_A549_PD325901_60min_R1 2 DVDSRPEIQRLDT 13 2 Q8IZR5-3;Q8IZR5-2 Q8IZR5-3 CMTM4 CKLF-like MARVEL transmembrane domain-containing protein 4 1 DVDSRPEIQRLDT(1);DVDSRPEIQRLDT(1) 74.77199999999999 0.0020967 19250800.0 3669.8999999999996 3817.3 3934.2000000000003 3545.9 3536.5 4740.0 4029.5 4056.3 4282.700000000001 4013.7 4327.7 True False 4042.4655463624126 4138.997267815515 4201.198470266473 3764.92218967681 3288.108440262676 4701.399011541993 4182.844827527005 3975.3939143942075 4102.713012490427 3760.2742970176746 3795.42033555061 1.065090342826538 1.0905240795193931 1.1069125680007181 0.9919644879413927 0.86633578090519 1.2387031200484808 1.1020768341117586 1.0474186158402106 1.0809640697926115 0.9907398824304827 1.0 11.890043954870267 -10.804390869207326 1.0050004660035359 0.9992776361448825 1.065953370398301 0.09039343576195935 0.08502378325705856 1.2838361320264111 2.2604950858671176 0.061863107278353854 0.014754649966418646 1.5689500985380645e-11 10.804390869207326 0.06667573425341855 DVDVSEDS(ph)PPPLPER ddPTM_A549_MK2206_60min_R1 4 DVDVSEDSPPPLPER 15 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 DVDVSEDS(1)PPPLPER;DVDVS(0.037)EDS(0.963)PPPLPER;DVDVS(0.001)EDS(0.999)PPPLPER;DVDVS(0.15)EDS(0.85)PPPLPER 289.61 2.612199999999999e-123 61762710.0 9108.2 9359.900000000001 8303.3 8182.4 13275.95 12412.9 10135.400000000001 10740.6 13688.212 11274.099999999999 10940.740000000002 True False 10645.441485889816 9836.27893063472 9480.832795786364 10187.088367321889 11323.075341544623 13726.424838983838 11976.87098525739 12263.112941707981 10587.85383758291 8727.272979797495 8223.852308937192 1.294459224945101 1.1960670694371833 1.1528457029174952 1.2387246249851993 1.3768578175023134 1.669099142754154 1.4563577427383565 1.491164053175075 1.287456710047755 1.0612147023011607 1.0 13.005598640259398 -10.097249365400376 0.9049880842413458 1.025796497004758 1.3524819605502472 0.4306446284758114 0.1413530293666652 0.3930215483981872 0.6437113534566461 0.06778764218181153 0.031191596520185383 7.993751339552709e-11 10.097249365400376 0.3266854635454892 DVDVSEDS(ph)PPPLPER ddPTM_A549_PD325901_60min_R1 4 DVDVSEDSPPPLPER 15 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 DVDVSEDS(1)PPPLPER;DVDVS(0.021)EDS(0.979)PPPLPER;DVDVSEDS(1)PPPLPER;DVDVS(0.009)EDS(0.991)PPPLPER 293.8 1.7207e-123 86453900.0 12637.8 13212.32 13774.986 11434.3 15341.3 10825.9 11515.44 12218.5 12133.91 13807.41 15386.9 True False 13920.780152543352 14325.768575041073 14709.839385679947 12140.570741820555 14263.78001261183 10737.7374597157 11953.666370690562 11974.792432272172 11623.963959508656 12935.607776212664 13494.40884559552 1.0315961456204874 1.0616077176079413 1.0900691948785244 0.8996741451021881 1.057014069739515 0.7957175140147337 0.8858236405511127 0.8873891823857597 0.8613911207605537 0.9585901779191132 1.0 13.720074157079805 -6.392185703939036 1.7793013945395624 0.9205924156838511 1.062457471342521 0.4257291228846599 0.07020916194262283 0.3055720212223403 1.8600506201765796 0.011330162465222894 0.03532492557468872 4.0533517742128134e-07 6.392185703939036 0.14186505565866991 DVEDMELS(ph)DVEDDGSK ddPTM_A549_MK2206_60min_R1 4 DVEDMELSDVEDDGSK 16 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(0.999)DVEDDGS(0.001)K 192.32 3.309e-35 21055900.0 3897.8300000000004 3501.13 3162.2999999999997 2981.96 4060.1 3982.74 3381.59 4648.389999999999 4966.82 3879.33 4196.92 True False 4555.688411205936 3679.3225624646743 3610.7616911487257 3712.540333865273 3462.864668381949 4404.190903271154 3995.9811309900488 5307.313517597335 3841.8432003817247 3002.9866586883027 3154.7089349006274 1.4440915169086554 1.1662954137417347 1.1445625462313733 1.1768249973217315 1.097681193365317 1.3960688590150028 1.2666718906401808 1.682346494436424 1.217812254525073 0.9519060936069832 1.0 11.62329118763649 -9.987173903146585 1.1390523776589219 1.0321068313691657 1.2796725612875035 0.3392644724873879 0.162836382992936 0.4133016452976312 1.0805082126019236 0.054126729989259985 0.030950150844057916 1.0299736088277684e-10 9.987173903146585 0.2475657299183378 DVEDMELS(ph)DVEDDGSK ddPTM_A549_PD325901_60min_R1 2 DVEDMELSDVEDDGSK 16 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK 167.69 2.6039e-28 20968000.0 4072.1000000000004 4232.6 5117.7 4836.5 4844.299999999999 3473.0 3671.2999999999997 3711.3 4203.3 4705.0 4526.9 True False 4485.496594278421 4589.296056310995 5465.017897230119 5135.239620511542 4504.053079927745 3444.7170394694817 3811.013330512445 3637.2752100414746 4026.649918369491 4407.925497039679 3970.1199983834504 1.1298138585495705 1.1559590284877181 1.376537207806152 1.2934721425555156 1.1344878950161963 0.8676606855390009 0.9599239650348629 0.9161625370322551 1.014238844168201 1.1102751299291944 1.0 11.954966898694392 -7.022888261136369 5.4720382500203675 0.9868446431514871 1.2406665018742349 0.6821682126652173 0.08364660819663777 0.07618871369482731 7.000531667401323 0.01152174474528818 0.020842258275457708 9.486625116137536e-08 7.022888261136369 0.25382185872274776 DVEFQDGWPRS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 DVEFQDGWPRSPGR 14 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 DVEFQDGWPRS(1)PGR;DVEFQDGWPRS(1)PGR 98.165 1.1082e-05 13651800.0 1639.1100000000001 2079.2 1414.1999999999998 1491.0900000000001 2651.8 1549.87 1847.21 1396.88 2358.0 2685.1000000000004 3070.4 True False 1915.751695608008 2185.022399018761 1614.7548251660291 1856.407116937573 2261.7237328182187 1713.876214679557 2182.824146326468 1594.8920177655848 1823.9167649522442 2078.5340451170614 2307.9349412709503 0.8300717933379127 0.9467434978108599 0.6996535284815283 0.8043585127730131 0.9799772482203144 0.742601614989956 0.9457910217886881 0.6910472168194213 0.7902808403896501 0.9006033956799663 1.0 11.172386840868763 -10.762283193521574 1.0304420503685563 0.9992722622674614 0.8253917979425573 0.1734472089251523 0.09726731396619145 0.476287410585878 0.9043311672916929 0.05929423393027591 0.015354593346292522 1.7286887531226326e-11 10.762283193521574 -0.173880464324904 DVEFQDGWPRS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 DVEFQDGWPRSPGR 14 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 DVEFQDGWPRS(1)PGR;DVEFQDGWPRS(1)PGR 100.45 8.7851e-06 21958300.0 2997.4 2619.3 2965.8 3096.4 3253.0 2865.6000000000004 2188.55 2913.1 3943.8 3437.7 3369.7 True False 3301.693841430746 2840.03760343415 3167.0770228042065 3287.6575955653784 3024.520502240768 2842.263503686651 2271.8364678705134 2854.9959352172605 3778.0558009339316 3220.6430353184464 2955.2482622882585 1.1172306176653442 0.9610148966757531 1.071678837686526 1.112481018098877 1.0234404130564896 0.9617680991328549 0.7687464017359485 0.9660765126401353 1.2784224760895622 1.0898045610640819 1.0 11.529063617003096 -8.71585485570904 24.999977630319233 1.1314776018679964 0.9948812583894918 0.2057278562167807 0.10885293686118185 162.73917010781068 89251.05590944769 0.022845490202705165 0.02590430037898593 1.92373454719402e-09 8.71585485570904 -0.13659634347850458 DVES(ph)PSWR ddPTM_A549_MK2206_60min_R1 2 DVESPSWR 8 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 DVES(1)PSWR;DVES(0.861)PS(0.139)WR 146.88 0.00080111 62716000.0 13297.5 10959.9 8289.0 8192.9 16046.7 13107.9 11424.099999999999 11864.2 17071.6 17563.6 16944.4 True False 15541.792907338433 11517.712096482172 9464.504840758884 10200.160867793255 13686.251686934955 14494.969277680171 13499.711094054384 13545.986682588671 13204.909857743316 13595.970561550028 12736.63783835055 1.22024297970862 0.904297683789191 0.743092875912736 0.8008519200475452 1.0745576549036415 1.1380530295079296 1.0599116709910827 1.0635449366237875 1.0367657481774961 1.0674693536948967 1.0 13.636696871107667 -6.7801609526876945 24.9426576945546 1.03714414036225 0.9037747500552344 0.24320621813452892 0.11741976646667404 269.1383804185391 358571.31125250144 0.017012409697507135 0.03218971521063325 1.6589719664399586e-07 6.7801609526876945 -0.13336939030701567 DVES(ph)PSWR ddPTM_A549_PD325901_60min_R1 2 DVESPSWR 8 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 DVES(0.986)PS(0.014)WR;DVES(0.975)PS(0.025)WR 102.62 0.0022034000000000003 129817000.0 17405.6 19199.6 14992.4 22238.0 18123.1 15978.2 14106.2 13497.5 28954.0 20417.7 23082.0 True False 19172.603698674502 20817.617673002067 16009.874420625036 23611.590753837638 16850.19597730085 15848.07883675532 14643.019160208818 13228.281773916093 27737.164070247258 19128.52293749352 20243.06032885349 0.9471198221618097 1.0283829290045452 0.7908821176512193 1.1664042081711727 0.8323937044876256 0.7828894731972036 0.7233599526123705 0.6534724275390876 1.3702060666544589 0.9449422481949844 1.0 14.305139791494046 -8.763848921267682 24.999830090198227 1.174819523308691 0.8699675484541035 0.2539508547409036 0.1716542551426762 51.22018824699862 531425.6994785238 0.032443062854303865 0.035339899651264654 1.7224676684234865e-09 8.763848921267682 -0.3048519748545876 DVESPS(ph)WR ddPTM_A549_MK2206_60min_R1 2 DVESPSWR 8 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 DVES(0.038)PS(0.962)WR;DVES(0.012)PS(0.988)WR 80.755 0.0038494999999999996 9019400.0 3658.6000000000004 2971.4 2270.59 2116.6000000000004 4291.299999999999 3454.2 2609.6000000000004 3215.1 4330.799999999999 4512.0 4150.1 True False 4276.082235817888 3122.6315681244437 2592.5938046059473 2635.167095017785 3660.0554546507337 3819.721151287608 3083.730540790464 3670.8502708308047 3349.8807148664882 3492.7360662799065 3119.5156330668897 1.3707519816510563 1.0009988522014523 0.8310885757790194 0.8447359798697572 1.1732768433195582 1.2244596920106874 0.9885286382613047 1.1767372575151616 1.0738464264636878 1.119640507409829 1.0 11.607106323999487 -5.257707033203538 24.222034401494764 1.0357428128306356 1.3707521843681822 0.3685665681876338 0.1228379040959371 193.07635404151958 1252933.1757605532 0.016791505606413366 0.17224353812840346 5.524499858621229e-06 5.257707033203538 0.3350093715375466 DVESPS(ph)WR ddPTM_A549_PD325901_60min_R1 2 DVESPSWR 8 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 DVES(0.015)PS(0.985)WR;DVES(0.112)PS(0.888)WR 70.908 0.0063753 18818200.0 7773.299999999999 6960.5 6830.5 6960.1 7446.299999999999 7420.1 7366.3 6584.3 9680.4 8807.1 9854.099999999999 True False 8562.439693598986 7547.085762876871 7294.05880513323 7390.009569466019 6923.2975763404365 7359.673165726319 7646.628577494024 6452.970971216571 9273.566452497806 8251.01820297091 8642.108170286598 0.9907813608534167 0.8732922122897459 0.8440138287335667 0.8551165321992197 0.8011121175437497 0.8516062308766786 0.8848105608981796 0.746689447073025 1.0730676207435468 0.9547459995166067 1.0 13.077167573418869 -8.775710941999446 24.99991519940995 1.034504167128613 0.855073939685093 0.5318919707293179 0.06286001850836205 100.00896457743201 175188.04120127513 0.010225592033427338 0.010910503226094827 1.6760580566631513e-09 8.775710941999446 -0.17943022744352 DVESVQT(ph)PSK ddPTM_A549_MK2206_60min_R1 2 DVESVQTPSK 10 0 P46013 P46013 MKI67 Antigen KI-67 1 DVESVQT(0.994)PS(0.006)K;DVES(0.004)VQT(0.965)PS(0.031)K 147.96 3.5878e-08 46680000.0 20733.0 23634.0 20979.0 22344.0 28288.0 23346.0 21754.0 25201.0 32418.0 33875.0 35151.0 True False 24232.2235268169 24836.869651024128 23954.137658858803 27818.28100306029 24126.87267288701 25816.458224179416 25706.420211663015 28773.318924825708 25075.37476090835 26222.613972790725 26422.03658175327 0.9171217158767909 0.9400058763137192 0.9065969454981844 1.0528439364235551 0.9131344814482896 0.9770805571440296 0.9729159269053298 1.0889894439362107 0.949032625979524 0.9924524134108472 1.0 14.68945405177982 -6.212117995410544 24.999872215945253 0.9830286338702908 0.9231179232512583 0.3105933243421497 0.04597566782196476 404.2286174482958 204893.5967551475 0.006220391928448117 0.016457592971214904 6.135952720712876e-07 6.212117995410544 -0.059910710619032526 DVFERPS(ph)AK ddPTM_A549_PD325901_60min_R1 1 DVFERPSAK 9 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 DVFERPS(1)AK 70.41199999999999 0.00099492 5178500.0 2255.9 2756.3 2708.3 2759.7 3367.6 2648.9 2708.5 2556.5 2751.8 2790.2 3079.0 True False 2484.917307294194 2988.5830742356898 2892.1015243309153 2930.160401266557 3131.0713935893064 2627.3282366399944 2811.573449648072 2505.5086019645487 2636.1514156422736 2614.0262958214885 2700.30251938913 0.9202366362478301 1.1067586141836343 1.0710287101406604 1.0851230113022396 1.1595261534983963 0.972975515807894 1.0412068386634377 0.9278621872823909 0.9762429937807973 0.9680494230005166 1.0 11.398905328521092 -7.307923080249148 24.999937952321254 0.9868245013607713 1.0717184088441503 0.3439611400608512 0.059794166528602324 350.5758043865765 188546.4180576553 0.008314774268796067 0.013292108898007218 4.9212669062340906e-08 7.307923080249148 0.084893907483379 DVFRDPALK ddPTM_A549_MK2206_60min_R1 2 DVFRDPALK 9 1 P61353;K7ELC7 P61353 RPL27 60S ribosomal protein L27 0 ; 71.34899999999999 0.0031773000000000005 5857300.0 3770.8 3571.7 3970.0 3025.0 4215.1 3620.5 3682.3999999999996 3774.1 4930.0 5361.9 4584.9 False True 4407.2188527912585 3753.484274035836 4533.005696442608 3766.125135797412 3595.0643737092046 4003.6189069066054 4351.444414242339 4309.090232696506 3813.3628715922664 4150.64306599872 3446.3427931973647 1.2788103555718657 1.089120989776388 1.3153090010054065 1.0927888958786272 1.0431534497396477 1.161700720778337 1.2626266959953978 1.2503370939194132 1.1064955230568914 1.204361642199828 1.0 11.750850492159326 -9.521579966792544 1.101021452225155 1.0223107009020378 1.1794848328291365 0.0 0.10098695311270316 0.32795198277011617 0.8266557520084395 0.023210064954239464 0.017072409494252483 3.008985072403966e-10 9.521579966792544 0.15717413192709873 DVFRDPALK ddPTM_A549_PD325901_60min_R1 2 DVFRDPALK 9 1 P61353;K7ELC7 P61353 RPL27 60S ribosomal protein L27 0 ; 74.165 0.0021976999999999995 10907000.0 2710.2 2843.5 2865.2 2835.8 3378.1000000000004 2571.5 2920.3 3047.2 2909.6000000000004 2988.2 3101.9 False True 2985.337508856211 3083.1317242641185 3059.6497018472605 3010.960925430919 3140.8339098123392 2550.5585565781084 3031.433614549478 2986.4212055178446 2787.3196304065536 2799.5245420305982 2720.38596456419 1.0973948357855414 1.1333434903815351 1.1247116187564292 1.1068138729767631 1.154554519367808 0.9375723113564556 1.1143395290363212 1.0977931971488737 1.024604474039435 1.02909093727775 1.0 11.409595638218502 -7.912865079845985 0.33807822321151104 0.9949729114478304 1.139606412644375 0.3207920863510142 0.05267797315785194 1.027497806713967 0.2822479769664719 0.02777363970797535 0.05349480406686873 1.2221792896874788e-08 7.912865079845985 0.1446335011965446 DVFYYS(ph)PSGKK ddPTM_A549_PD325901_60min_R1 1 DVFYYSPSGKK 11 1 O95983 O95983 MBD3 Methyl-CpG-binding domain protein 3 1 DVFYYS(0.98)PS(0.02)GKK 87.49799999999999 0.00012858 4084500.0 2796.5 2911.2 3343.0 3130.8 3296.8 3527.4 3053.2 2914.0 3853.5 2957.2 3316.3 True False 3080.398621325507 3156.537040857288 3569.8760830920673 3324.1824054373083 3065.244141342565 3498.674023905743 3169.3911967751465 2855.877984011223 3691.5507959072233 2770.4818873210893 2908.4161237577687 1.0591326998096584 1.085311353857762 1.227429615016599 1.1429528182997266 1.053922138687008 1.2029482285311162 1.08973099512328 0.9819358243418536 1.269265001576741 0.9525741054349322 1.0 11.506017983332477 DVGDT(ph)CSVGKKDEEQAALGQK ddPTM_A549_MK2206_60min_R1 1 DVGDTCSVGKKDEEQAALGQK 21 2 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 DVGDT(0.601)CS(0.399)VGKKDEEQAALGQK 102.07 4.0687e-10 12954000.0 2429.6 3350.6 2528.1 2158.8 3408.8 2820.5 2519.7 2518.1 4400.7 3277.5 4542.1 True False 2839.6570819830386 3521.13122843029 2886.622594754798 2687.7060969122163 2907.370035610054 3118.9634379036265 2977.4968744749112 2875.048386357826 3403.9484764738527 2537.110473677392 3414.171214417272 0.8317266193305741 1.031328251366349 0.8454826701617201 0.7872206541847233 0.8515595302698613 0.9135345716503467 0.8720994605957709 0.8420926209608784 0.9970057922402219 0.7431116702536033 1.0 11.737319693349082 -8.771130396634943 24.906964181809023 0.9985860834847354 0.8742119428921685 0.0 0.09688352127205596 117.01848290312867 300749.23884891166 0.010115030272857144 0.010834804364000111 1.693829152992152e-09 8.771130396634943 -0.1243741405925669 DVGRPNFEEGGPT(ph)SVGR ddPTM_A549_MK2206_60min_R1 1 DVGRPNFEEGGPTSVGR 17 1 Q6Y7W6;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 DVGRPNFEEGGPT(0.5)S(0.5)VGR 72.916 0.00026384 5096600.0 782.1 1022.0 793.32 520.85 1268.8 1100.0 734.15 801.18 1152.3 1227.5 1412.5 True False 914.099359490836 1074.0154346850584 905.8247050634383 648.4582733818448 1082.1612007691965 1216.4012698790953 867.5355520084763 914.7497185108471 891.3058898449833 950.2068974642257 1061.737266983201 0.860946853724123 1.0115642241104943 0.8531533489798568 0.6107521074628578 1.0192363350342102 1.1456706924636388 0.8170906108188841 0.8615593960547308 0.8394787651916205 0.8949548320594648 1.0 10.052211091750658 DVHGEQETEGRS(ph)SPGPDTLVVLEFNPASK ddPTM_A549_MK2206_60min_R1 1 DVHGEQETEGRSSPGPDTLVVLEFNPASK 29 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 DVHGEQET(0.024)EGRS(0.487)S(0.487)PGPDT(0.002)LVVLEFNPASK 87.712 1.4765e-09 8946500.0 596.86 526.89 710.6 569.28 981.42 1030.0 757.86 739.54 1087.6 1095.0 1139.8 True False 697.5953761740191 553.7064504708519 811.3737652121192 708.75362555595 837.0544180792131 1138.9939163413344 895.5533521012651 844.3720597462634 841.2603365403147 847.6387394894716 856.7562031203199 0.8142285677458365 0.6462823945181185 0.9470299278337091 0.8272524003615706 0.9770042108019147 1.3294259349311977 1.0452837678205835 0.9855453122732544 0.9819133301590709 0.9893581586014291 1.0 9.742740922014974 -6.308856992637871 1.466869416140228 1.01782025409734 0.7490447753786619 0.4749889109397156 0.1166434266892918 0.3063841404674626 1.227365201899706 0.01750240261568321 0.0666563487615437 4.91069552165397e-07 6.308856992637871 -0.26877547871867813 DVHGEQETEGRS(ph)SPGPDTLVVLEFNPASK ddPTM_A549_PD325901_60min_R1 1 DVHGEQETEGRSSPGPDTLVVLEFNPASK 29 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 DVHGEQET(0.028)EGRS(0.486)S(0.486)PGPDT(0.001)LVVLEFNPASK 132.76 1.0977000000000001e-27 16407000.0 1180.0 1165.0 1142.3 1577.6 1810.9 1148.0 1361.7 1197.9 1557.6 1404.5 1522.6 True False 1299.7927313299128 1263.1786385678563 1219.8233472079187 1675.0447690104427 1683.7086312658491 1138.6510686181866 1413.5202386508322 1174.0069447656292 1492.139488699906 1315.8196303065297 1335.329852556638 0.9733870090909109 0.9459674972062969 0.9134996457035922 1.2544052436208049 1.2608934249782564 0.8527114603467542 1.0585551097689385 0.8791887206878974 1.1174313865918886 0.9853892113527203 1.0 10.382980444453143 DVHGEQETEGRSS(ph)PGPDTLVVLEFNPASK ddPTM_A549_PD325901_60min_R1 1 DVHGEQETEGRSSPGPDTLVVLEFNPASK 29 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 DVHGEQET(0.027)EGRS(0.177)S(0.796)PGPDTLVVLEFNPASK 177.99 5.5838e-58 12961000.0 905.23 1283.7 1750.3 1357.6 1300.2 1422.4 1334.1 1520.2 1505.3 1418.1 1415.9 True False 997.1282832048959 1391.8819041455422 1869.0858834089283 1441.4558686666953 1208.8784374464954 1410.8164459952168 1384.869905547531 1489.8784184261706 1442.0374758217574 1328.5609239855407 1241.7532761296104 0.8030003241165748 1.1209005290357388 1.5051990756445879 1.1608230848881131 0.9735254665197407 1.1361487608815135 1.11525367572534 1.1998183915164977 1.1612914606647207 1.0699073233988148 1.0 10.27816283771846 -10.728200083878969 0.9430904952673718 0.9985103861583449 1.1399420064986017 0.04172422038779311 0.160786757205174 1.1906295261498423 1.8515571663091714 0.11514827362547804 0.028574447809782664 1.8698204966023568e-11 10.728200083878969 0.1414316203402568 DVIATDKEDVAFK ddPTM_A549_PD325901_60min_R1 1 DVIATDKEDVAFK 13 1 A0A5K1VW95;P40925;P40925-3;C9JF79;C9JLV6;C9JRL4 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic;Malate dehydrogenase 0 53.869 0.021292 3662000.0 2549.4 2667.9 2718.2 2687.7 3237.8 2696.0 2881.4 3038.9 2962.8 2996.0 3161.1 False True 2808.213211230913 2892.7332959958653 2902.6733978644515 2853.7131247904213 3010.3880978036163 2674.0446698559517 2991.0532537625822 2978.2867555290677 2838.2838194145393 2806.83204869944 2772.3047398639087 1.0129525700586464 1.0434398695065061 1.0470253706693669 1.0293648760022351 1.0858792161324209 0.9645565407745252 1.0789049308877248 1.0742999182965978 1.0237993603668079 1.0124543699467996 1.0 11.43687013612203 -9.378340546216663 1.6884776573651523 1.0069336057027032 1.0416410714090254 0.1430248731420467 0.03255255074976335 0.391479013365711 2.288920522472995 0.0068179347583251695 0.00581774821576288 4.1846530245630156e-10 9.378340546216663 0.034707465706322216 DVIEEYFK ddPTM_A549_MK2206_60min_R1 2 DVIEEYFK 8 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ; 103.56 0.0059001999999999995 9504500.0 2749.2 2418.7 2550.7 2279.6 3388.3 2517.8999999999996 2212.41 2707.9 3799.3 3697.4 3723.4 False True 3213.1977485132415 2541.801498897016 2912.4276145884505 2838.1021023351327 2889.885558453868 2784.342506753249 2614.376259101102 3091.75311759595 2938.7646162353944 2862.154772044175 2798.777019387787 1.1480720780021647 0.9081829246450713 1.0406072346647766 1.0140508095768015 1.0325529824044397 0.994842564257693 0.934113807920639 1.1046800428110737 1.0500174168495313 1.0226448024324037 1.0 11.45058083558225 -8.260734317736112 24.999500480520844 1.0303588387095675 1.0079809157496444 0.04616031196555859 0.06310922269077053 225.41434937147588 7992618.77456904 0.009603223732795787 0.012056973157618665 5.486124792709343e-09 8.260734317736112 -0.022377922959923024 DVIEEYFK ddPTM_A549_PD325901_60min_R1 4 DVIEEYFK 8 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ;;; 119.27 0.0033948 15361700.0 4416.95 5014.8099999999995 5121.55 4836.599999999999 6874.599999999999 5861.91 5346.33 5780.67 6037.0 5821.83 6199.13 False True 4865.355512413266 5437.425638177224 5469.1291813820435 5135.345797284427 6391.751812082506 5814.172548470066 5549.787513774028 5665.370002002111 5783.28588423301 5454.238660240274 5436.676309522808 0.894913589740698 1.000137828447337 1.005969248491471 0.9445744982627392 1.1756726809147715 1.0694351139290823 1.020805212194277 1.0420649822537211 1.0637539472605873 1.0032303469468478 1.0 12.408509219741683 -4.483104008423831 0.8913079189351347 1.0388285423643646 0.4904045451280112 0.3772475112742184 0.05409484529789335 6.02098043809462 1.3086445659322985 0.008262574014315554 4.4962527033926305 3.287728842054522e-05 4.483104008423831 -0.5484239972363534 DVILDEKS(ph)ITGEEMSDIYVK ddPTM_A549_PD325901_60min_R1 3 DVILDEKSITGEEMSDIYVK 20 1 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3 Q9NZM1-5 MYOF Myoferlin 1 DVILDEKS(0.959)IT(0.032)GEEMS(0.009)DIYVK;DVILDEKS(0.915)IT(0.071)GEEMS(0.014)DIYVK;DVILDEKS(0.943)IT(0.056)GEEMSDIYVK 81.949 4.3652e-05 9892100.0 3803.4 3957.0 4009.0 4395.9 5047.5 4285.6 4107.1 4659.900000000001 4326.6 4354.0 4679.09 True False 4189.518368084908 4290.470277092711 4281.074848075413 4667.424759186742 4692.981012929692 4250.699494486149 4263.397937991356 4566.95463887917 4144.768048156791 4079.0876969417122 4103.5915931953505 1.0209394070872069 1.0455402736001422 1.0432507112000053 1.137399922284262 1.143627699382092 1.035848572634454 1.038943043226085 1.1129164623624281 1.0100342478110444 0.9940286708125947 1.0 12.002671439634607 -8.857506803147428 8.032000471144228 1.004466482982246 1.072603724070705 0.381947446716594 0.04017741393685594 0.19639276604311479 14.58364000419645 0.007248219311967826 0.007702959183405891 1.388331561786562e-09 8.857506803147428 0.06813724108845887 DVKPHNVMIDHEHR ddPTM_A549_MK2206_60min_R1 6 DVKPHNVMIDHEHR 14 1 P68400;A0A2R8Y4D6;Q8NEV1;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8YDP2;A0A2R8Y4H0;P68400-2;A0A2R8Y5A0;V9GYW6 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ;;;;; 98.694 1.348e-05 32506400.0 2109.33 2628.92 2406.8230000000003 1687.9470000000001 3000.7 2099.38 2317.63 2263.2770000000005 3370.84 3397.75 2907.24 False True 2465.333335832764 2762.7207989747994 2748.1466925262175 2101.4940907748214 2559.301005003254 2321.5349981443424 2738.7133711113593 2584.1034457451183 2607.3501221253714 2630.195915160139 2185.29207225787 1.1281482082555454 1.2642341195702609 1.2575649394484827 0.9616536468754643 1.171148258621079 1.0623454080193977 1.2532482069006399 1.1824979729483902 1.1931357621370153 1.2035901052084945 1.0 11.09361039873023 -10.752323100366574 0.9445069591588993 0.9974588426579504 1.1650399482460077 0.0 0.10412112729665687 0.5419900295863705 0.8380732513934127 0.06274444600495926 0.015099032649733852 1.7687925470244475e-11 10.752323100366574 0.16758110558805728 DVKPHNVMIDHEHR ddPTM_A549_PD325901_60min_R1 3 DVKPHNVMIDHEHR 14 1 P68400;A0A2R8Y4D6;Q8NEV1;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8YDP2;A0A2R8Y4H0;P68400-2;A0A2R8Y5A0;V9GYW6 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ;; 88.97399999999999 1.5983e-05 22561500.0 1704.6999999999998 1623.0500000000002 1926.7 1820.45 1906.12 1356.54 1649.31 1887.4700000000003 1572.56 2124.65 1932.11 False True 1877.759889066187 1759.8301195944696 2057.4574481883005 1932.895061958076 1772.2407069570172 1345.4927879994038 1712.075394587062 1849.8229301584302 1506.4707719247087 1990.499236404962 1694.472718654411 1.1081676726889562 1.038570937271837 1.214216921605051 1.1407059203012706 1.0458950961242752 0.794048067689084 1.0103882911414646 1.091680562214884 0.8890498827983518 1.1747012592717498 1.0 10.72662069399575 -7.007077189469483 12.55886810621504 0.9526639660150547 1.1215530367265951 0.21086212507955715 0.10419536089241266 0.35532718693075394 627.7918229932922 0.012100006082798744 0.02202822865077937 9.838362277720855e-08 7.007077189469483 0.16888907071154047 DVKPHNVMIDHEHRK ddPTM_A549_MK2206_60min_R1 4 DVKPHNVMIDHEHRK 15 2 P68400;A0A2R8Y4D6;Q8NEV1;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8YDP2;A0A2R8Y4H0;P68400-2;A0A2R8Y5A0;V9GYW6 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ;;; 76.82 0.00013503 20791700.0 4588.5 4389.81 4421.42 3676.04 5351.9 4095.72 3442.3 2442.35 5884.7 6503.3 5453.8 False True 5362.9266219456595 4613.232578605498 5048.443840394276 4576.669965023704 4564.642599619062 4529.126371881097 4067.72135214708 2788.5605918831807 4551.824845934891 5034.2000132619905 4099.470942777332 1.3081996913270848 1.1253238876429503 1.2314866749547024 1.1164050261380989 1.1134711437975415 1.104807531289069 0.9922551980308116 0.6802245047732846 1.1103444589489138 1.2280121224255813 1.0 12.001222019397403 -6.789482181588008 1.117565940570159 1.0194522900429257 1.2190417638987217 0.3021686940561148 0.13216355151251144 0.4809342904651734 1.169298200123543 0.019687319008449534 0.05891751818596895 1.6237449687898538e-07 6.789482181588008 0.19958947385579595 DVKPHNVMIDHEHRK ddPTM_A549_PD325901_60min_R1 4 DVKPHNVMIDHEHRK 15 2 P68400;A0A2R8Y4D6;Q8NEV1;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8YDP2;A0A2R8Y4H0;P68400-2;A0A2R8Y5A0;V9GYW6 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ;;; 60.918 0.00099767 21817100.0 3732.18 4575.16 3515.25 3455.67 6287.7 4838.9 4263.96 3684.3099999999995 5062.53 6159.299999999999 4210.57 False True 4111.068166114296 4960.724789725415 3753.816003915464 3669.1188875040084 5846.073643387418 4799.493602732182 4426.227331128443 3610.8235467647164 4849.769469522302 5770.4007468472855 3692.696583002367 1.1132970374651714 1.3433881387817872 1.0165514332248233 0.9936150466282858 1.5831448677091786 1.2997259576712712 1.1986436555612363 0.9778283879009948 1.313340904271959 1.56265228326873 1.0 11.850459010465542 -10.997632152594552 1.2034773746146377 0.9969224914925943 1.2151872816750966 0.0 0.23932995366909493 0.7111569016387073 1.7892972944061547 0.13132230805429165 0.02821142111420865 1.0054670602667502e-11 10.997632152594552 0.21826479018250233 DVLDIEQFS(ph)TVK ddPTM_A549_MK2206_60min_R1 2 DVLDIEQFSTVK 12 0 F8W9W2;P43250-3;P43250;P43250-2;P34947 F8W9W2 GRK6;GRK5 G protein-coupled receptor kinase 6;G protein-coupled receptor kinase 5 1 DVLDIEQFS(0.908)T(0.092)VK;DVLDIEQFS(0.984)T(0.016)VK 185.87 2.7578000000000005e-19 40853000.0 2755.8 2174.0 2343.3999999999996 2258.22 4533.200000000001 3511.5 3097.2 3698.5 5139.8 4157.200000000001 3781.9 True False 3220.9116671587344 2284.647314095221 2675.729357441712 2811.484001375347 3866.372285093731 3883.084599254947 3659.9211491938336 4222.773701181216 3975.6435065740243 3218.0856326992102 2842.749854869924 1.1330267633787687 0.8036751141439281 0.941246853942464 0.9890015460062321 1.3600817808398569 1.3659607061813133 1.2874580374787499 1.485453844610059 1.3985203445752838 1.1320326433879848 1.0 11.473071440653966 -6.667907569799322 6.350663199966723 1.2460821253782248 0.9482677987392982 0.5134727781627211 0.14736443239760266 0.18831541875627358 10.695055176132234 0.027303502962303987 0.05713778402864659 2.1482876421060295e-07 6.667907569799322 -0.2978143266389266 DVLDIEQFS(ph)TVK ddPTM_A549_PD325901_60min_R1 3 DVLDIEQFSTVK 12 0 F8W9W2;P43250-3;P43250;P43250-2;P34947 F8W9W2 GRK6;GRK5 G protein-coupled receptor kinase 6;G protein-coupled receptor kinase 5 1 DVLDIEQFS(0.5)T(0.5)VK;DVLDIEQFS(0.5)T(0.5)VK;DVLDIEQFS(0.932)T(0.068)VK 249.04 1.1629999999999997e-62 41562000.0 15609.0 16656.1 18060.300000000003 16323.3 21534.0 17428.4 18963.0 18160.7 18842.1 19044.3 19596.2 True False 17193.614189261527 18059.76800158803 19285.98056340642 17331.553168095947 20021.526128267054 17286.468888767613 19684.64734195177 17798.47059170645 18050.232062167775 17841.83964787942 17185.991630546694 1.0004435332495616 1.0508423598605896 1.1221918977969922 1.0084697782169596 1.1649910321543757 1.0058464626528927 1.1453890915996912 1.0356382671612108 1.0502874928720998 1.0381617791647826 1.0 14.068945477066931 -9.871525782102331 0.6816409736599052 1.0030680336520699 1.0696452293166352 0.08912531649667299 0.05462647237573137 0.780323747204807 0.7481413000548252 0.024246574058375235 0.010934107031659672 1.3442319633207713e-10 9.871525782102331 0.06657719566456533 DVLDIEQFST(ph)VK ddPTM_A549_PD325901_60min_R1 1 DVLDIEQFSTVK 12 0 F8W9W2;P43250-3;P43250;P43250-2;P34947 F8W9W2 GRK6;GRK5 G protein-coupled receptor kinase 6;G protein-coupled receptor kinase 5 1 DVLDIEQFS(0.222)T(0.778)VK 111.94 6.1686e-05 864280.0 847.47 967.37 799.17 1063.1 1198.3 981.3 970.66 938.02 1072.9 905.74 1017.0 True False 933.5045305255596 1048.8936648853105 853.406481999608 1128.7652725247226 1114.1355419105782 973.3086181489784 1007.5989974655324 919.310455237545 1027.8097441102532 848.5514218254443 891.9154472941685 1.0466289527303976 1.1760012320308744 0.9568244216294421 1.2655518815702684 1.2491492834781208 1.0912565996045196 1.1297023731591562 1.0307148037703413 1.1523623088134098 0.9513810130766555 1.0 9.800763140333775 -10.983643159208768 0.7063776818162298 0.9777381992282063 1.127013684767237 0.2820871545970196 0.08817749097321138 1.3317843614100062 0.8759959275490384 0.12694947279983715 0.01635190632653844 1.0383812578867968e-11 10.983643159208768 0.1492754855390307 DVLET(ph)EDEEPPPRR ddPTM_A549_MK2206_60min_R1 1 DVLETEDEEPPPRR 14 1 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3;A0A0U1RQR2 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 DVLET(1)EDEEPPPRR 70.529 0.0014265 2382100.0 0.0 104.76 144.48 0.0 213.69 0.0 99.008 0.0 0.0 141.24 101.11 True False 0.0 110.09183653386178 164.96943652947797 0.0 182.25648407343132 0.0 116.99647201968972 0.0 0.0 109.33378590455982 76.00159650596206 0.0 1.4485463673809202 2.1706048834978975 0.0 2.3980612572939037 0.0 1.5393949258751658 0.0 0.0 1.438572226518728 1.0 6.247957819325724 DVLET(ph)EDEEPPPRR ddPTM_A549_PD325901_60min_R1 4 DVLETEDEEPPPRR 14 1 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3;A0A0U1RQR2 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 DVLET(1)EDEEPPPRR;DVLET(1)EDEEPPPRR;DVLET(1)EDEEPPPRR;DVLET(1)EDEEPPPRR 75.961 0.00050664 7084490.0 530.0400000000001 598.3 439.02 613.75 734.81 629.02 591.54 724.6179999999999 685.04 580.31 1044.6100000000001 True False 583.849270605175 648.7208407340324 468.814537241723 651.6599435726167 683.1994805568826 623.8974696709159 614.0513784031082 710.164925538176 656.2501510907701 543.6691275636759 916.129592328379 0.6372998705579408 0.7081103439583075 0.5117338651295092 0.7113185176306746 0.7457454559681939 0.6810144273205456 0.6702669399014529 0.7751795504534073 0.7163289523514734 0.5934412905295633 1.0 9.839407880875735 -13.19725400269832 0.20619151457371016 1.6842426433398845 0.6211322467505607 0.0 0.13686096808717998 6.50782092381369 0.14892583671608559 1.9381550802915597 0.050652393503615625 6.349594590479357e-14 13.19725400269832 -1.0631103965893238 DVLLQVDDERR ddPTM_A549_MK2206_60min_R1 1 DVLLQVDDERR 11 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 54.7 0.0183 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DVLLQVDDERR ddPTM_A549_PD325901_60min_R1 1 DVLLQVDDERR 11 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 67.02199999999999 0.0048912 3161600.0 296.1 327.26 269.18 210.84 397.94 310.87 267.34 185.22 355.14 259.38 212.91 False True 326.1598540227009 354.83934871906996 287.4481735108353 223.86310794761783 369.9900672184725 308.3383777886199 277.51376999406125 181.52564179772088 340.21470083261727 243.00270253393228 186.72341974769068 1.7467538590682583 1.9003473115399518 1.5394328890251077 1.1989021422707018 1.9814872056136301 1.6513106829623245 1.4862290459817558 0.9721632243186565 1.8220247963128091 1.301404520452168 1.0 7.544759078425423 -10.96456945105408 1.0469585187130628 0.9747005128468791 1.6002300382373493 0.22566653542268034 0.2953433831278511 0.5074059904892285 0.9190248837163377 0.24988999361032568 0.048883041305816215 1.0850020255309374e-11 10.96456945105408 0.6255295253904702 DVMS(ph)DETNNEETESPSQEFVNITK ddPTM_A549_MK2206_60min_R1 2 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMS(0.717)DET(0.13)NNEET(0.071)ES(0.071)PS(0.01)QEFVNITK;DVMS(0.241)DET(0.241)NNEET(0.241)ES(0.241)PS(0.035)QEFVNITK 52.06100000000001 0.0017312999999999999 4713690.0 1300.79 1403.08 1494.46 1042.82 1722.64 1514.9 1221.26 1318.0500000000002 1775.87 1887.4499999999998 2435.92 True False 1520.3315507378643 1474.4907789607748 1706.3969000266036 1298.3109468139678 1469.2419379674095 1675.2057124907644 1443.147133754507 1504.887623858835 1373.6382804816553 1461.0737341090453 1831.0138360281194 0.8303222623570148 0.8052865303078631 0.9319410189319826 0.709066704613383 0.8024198993244779 0.9149060916572112 0.7881683389596976 0.8218876309112303 0.7502063902812365 0.7979588713968665 1.0 10.838426977541594 -10.901755414864008 1.1179858264900948 1.0014424053104545 0.813370782596014 0.0 0.08415917923550914 0.2973045174156792 0.6516296570048095 0.04391550118312917 0.010144271764919114 1.2538471153588724e-11 10.901755414864008 -0.18807162271444045 DVMSDET(ph)NNEETESPSQEFVNITK ddPTM_A549_MK2206_60min_R1 1 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMS(0.404)DET(0.493)NNEET(0.051)ES(0.051)PS(0.001)QEFVNITK 79.783 5.123099999999999e-06 2737700.0 894.6 1292.2 976.45 802.29 1280.1 1288.0 919.95 927.42 1375.8 1591.2 1311.5 True False 1045.586609129908 1357.9674605675466 1114.92529276861 998.8510860161663 1091.7989857382163 1424.295305094796 1087.0930069743206 1058.8846251046327 1064.1834967011443 1231.7468148636056 985.8183544413931 1.0606280603513232 1.3775027158396023 1.1309642265692794 1.0132202159921826 1.107505232398393 1.4447847300447787 1.1027315550341057 1.0741173770340704 1.079492476384411 1.2494663031117594 1.0 9.94517803182573 -7.993076455883397 24.996904005200104 1.043572978986677 1.1908551651129669 0.03753460228736316 0.1364746989100747 188.86720187805005 681885.6069675181 0.01889515687197357 0.02607618200826083 1.0160698019200424e-08 7.993076455883397 0.14728218612628985 DVMSDETNNEET(ph)ESPSQEFVNITK ddPTM_A549_MK2206_60min_R1 3 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMSDETNNEET(0.487)ES(0.487)PS(0.026)QEFVNITK;DVMSDETNNEET(0.452)ES(0.452)PS(0.095)QEFVNITK;DVMSDET(0.002)NNEET(0.332)ES(0.332)PS(0.332)QEFVNITK 105.51 2.2146e-11 13022700.0 2441.72 2639.58 2776.3399999999997 2958.0099999999998 4148.5 2622.2000000000003 3079.14 3374.04 4539.3 4047.0 4549.4 True False 2853.8226416774874 2773.9233474422563 3170.0667595117034 3682.722582790115 3538.2611454847192 2899.6794635245114 3638.579880966261 3852.320502564137 3511.155797772572 3132.779889236433 3419.6584229475184 0.8345344150535602 0.8111697147375668 0.9270126917469483 1.0769270281725545 1.0346826226097088 0.8479441818125157 1.0640185161622215 1.126522016559681 1.0267562906900476 0.9161090090793877 1.0 11.739636511489506 -5.965559166317412 3.6958678402487513 1.0178454514586406 0.8247098684238328 0.5011548401966298 0.07262436434427455 0.1175566189218824 3.418077436647523 0.009128162557175934 0.030494154614842305 1.0825322257829715e-06 5.965559166317412 -0.19313558303480782 DVMSDETNNEET(ph)ESPSQEFVNITK ddPTM_A549_PD325901_60min_R1 2 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMS(0.265)DET(0.294)NNEET(0.35)ES(0.087)PS(0.005)QEFVNITK;DVMS(0.1)DET(0.115)NNEET(0.62)ES(0.134)PS(0.031)QEFVNITK 48.867 0.0025811999999999996 13464100.0 3452.8999999999996 3321.2 3033.4 3611.2000000000003 3510.5 3514.9 2945.8 4123.1 3749.7 3390.1000000000004 3941.0 True False 3803.4358661093684 3601.089179752412 3239.2647653160275 3834.2556223697493 3263.9345905675445 3486.2758197613816 3057.904031003613 4040.861535990625 3592.1131489330005 3176.0485074419157 3456.2819840573425 1.1004414233715099 1.0418968117656533 0.9372107890090156 1.1093584493556576 0.9443484662486941 1.0086780638392325 0.8847380060737775 1.1691353757100114 1.0392997925233534 0.9189205400751302 1.0 11.755005210614108 -5.352517974917527 4.0908891740920446 1.0157702362675416 1.101298044544093 0.0970326016520634 0.08041270802835335 0.3595847465254103 9.715816811085672 0.009312089332939746 0.07045344540279942 4.441012801762889e-06 5.352517974917527 0.08552780827655138 DVMSDETNNEETES(ph)PSQEFVNITK ddPTM_A549_MK2206_60min_R1 4 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMSDETNNEET(0.004)ES(0.989)PS(0.007)QEFVNITK;DVMSDETNNEET(0.113)ES(0.773)PS(0.113)QEFVNITK;DVMSDETNNEET(0.042)ES(0.823)PS(0.135)QEFVNITK;DVMSDETNNEET(0.001)ES(0.845)PS(0.154)QEFVNITK 155.44 6.610299999999999e-34 37026300.0 4731.29 5112.6 5012.88 4644.92 6547.599999999999 5298.2 4573.959999999999 4523.75 8422.099999999999 7022.400000000001 7082.599999999999 True False 5529.816083065334 5372.809502319796 5723.781762111643 5782.925608518383 5584.456713553269 5858.852007339473 5404.98932570277 5165.005415903346 6514.507797330065 5436.034962731389 5323.794950184221 1.038698172038723 1.0092066942085887 1.0751318966395542 1.0862412363042409 1.0489616459326683 1.1005029423863775 1.015251221408469 0.9701736194262365 1.2236586604644946 1.0210827076544868 1.0 12.378239290538257 -8.730617602042244 24.999998006924436 1.1056167390152591 1.0455933081215396 0.030869428268344934 0.06450253694427134 367.01276869267934 297689.10806262144 0.014341430855658715 0.01626071640812116 1.8594409794202694e-09 8.730617602042244 -0.06002343089371953 DVMSDETNNEETES(ph)PSQEFVNITK ddPTM_A549_PD325901_60min_R1 4 DVMSDETNNEETESPSQEFVNITK 24 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DVMSDETNNEET(0.053)ES(0.912)PS(0.034)QEFVNITK;DVMSDETNNEET(0.016)ES(0.87)PS(0.115)QEFVNITK;DVMSDETNNEET(0.003)ES(0.879)PS(0.119)QEFVNITK;DVMSDETNNEET(0.001)ES(0.998)PS(0.001)QEFVNITK 201.35 6.306599999999999e-62 99845000.0 12016.6 12935.599999999999 12036.2 13802.000000000002 13970.900000000001 13327.3 14650.900000000001 12532.8 13216.9 14031.7 14196.599999999999 True False 13236.516385846624 14025.728409492154 12853.048911550328 14654.51819338371 12989.632180988492 13218.766887452239 15208.4480167801 12282.823472208594 12661.439656007838 13145.7360673351 12450.508199662141 1.0631306107011609 1.1265185472407269 1.0323312675621634 1.1770216892657746 1.0433013635010482 1.0617050063716231 1.2215122284882154 0.9865318969503513 1.016941594107092 1.0558393164780073 1.0 13.603917010370427 DVNAAIAT(ph)IK ddPTM_A549_MK2206_60min_R1 2 DVNAAIATIK 10 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 1 DVNAAIAT(1)IK;DVNAAIAT(1)IK 118.37 7.054e-05 28598000.0 12865.7 12865.3 12010.4 12265.099999999999 15562.1 13090.3 12537.1 12491.1 19635.3 18396.1 18217.1 True False 15037.115623834867 13520.08881786075 13713.655319031299 15270.05005060125 13272.935704989215 14475.506857362112 14814.928787149045 14261.7516773894 15187.935901130953 14240.408233353668 13693.291303617454 1.098137422948302 0.9873512888964139 1.001487152720432 1.1151482658203038 0.9693020772502524 1.0571239986355958 1.0819114600472481 1.0415137866541824 1.1091515957977647 1.039955107768114 1.0 13.741181632332815 DVNAAIAT(ph)IK ddPTM_A549_PD325901_60min_R1 2 DVNAAIATIK 10 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 1 DVNAAIAT(1)IK;DVNAAIAT(1)IK 129.71 1.3887000000000001e-06 47179000.0 8416.5 10028.3 9963.4 11437.7 11836.2 10459.7 10800.4 11243.6 10652.3 12434.1 11003.8 True False 9270.936884100174 10873.420035321908 10639.576238791366 12144.180752098599 11004.866144673277 10374.51967110249 11211.415132205657 11019.337577566432 10204.620875371089 11649.008803983224 9650.402358835374 0.9606787923834303 1.1267322989250086 1.102500791487762 1.258411856888025 1.14035308948521 1.0750349348495458 1.161756237235135 1.1418526573120278 1.0574295760868773 1.2071008410668014 1.0 13.236373379270281 -9.132610389696787 1.4394526329538067 1.0173790088713293 1.1255265350332493 0.0 0.08912848348711355 0.31345600790435535 1.3369755582318033 0.014722923442159676 0.013609762902725489 7.36867853230339e-10 9.132610389696787 0.10814752616192003 DVNAAIATIK ddPTM_A549_MK2206_60min_R1 1 DVNAAIATIK 10 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 0 160.36 2.659e-08 12427000.0 9047.8 9619.1 10090.0 9964.4 13371.0 9786.8 8889.0 9536.2 14201.0 13658.0 14315.0 False True 10574.847442528046 10108.671103502002 11520.913722192918 12405.678447318918 11404.143612456593 10822.43268004794 10504.016238920305 10887.985553387676 10984.496174337071 10572.64831410704 10760.190426098769 0.9827751204921825 0.9394509486545414 1.070697939903463 1.1529236896429853 1.0598458912767865 1.0057844937203158 0.9761924113761858 1.0118766603775842 1.020845890207877 0.9825707441443744 1.0 13.39341598944746 -7.2787343044793475 22.337130156058613 1.0071844910172665 1.0433418503569467 0.12903903424597485 0.05162728358331914 403.14901481679095 520684.23444706394 0.008231544171026272 0.013188342836242116 5.263391751364692e-08 7.2787343044793475 0.03615735933968023 DVNAAIATIK ddPTM_A549_PD325901_60min_R1 2 DVNAAIATIK 10 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 0 ; 162.38 1.9192e-08 57093000.0 21752.6 22102.2 24187.0 23128.8 28837.0 28156.0 26092.0 26016.0 27575.0 25870.0 25670.0 False True 23960.90793858225 23964.829961677635 25828.475268246457 24557.413446684048 26811.588602249336 27926.70687109206 27084.94533809023 25497.090470842806 26416.118644645572 24236.56378499819 22512.752735537182 1.0643259942512096 1.0645002076466774 1.1472819682097466 1.090822332353844 1.1909511429904478 1.240483880365672 1.2030934491336405 1.1325620980412023 1.1733846569081172 1.0765704252034853 1.0 14.458454851939056 -10.753270507308843 0.9426143124047939 0.9976701170937764 1.1479076769491592 0.31055354808842905 0.057718427284215466 0.41947662127633345 0.6452437769475443 0.04351825206828857 0.010437931426528506 1.76493815810866e-11 10.753270507308843 0.15023755985538279 DVNPGGKEET(ph)PGQRPAVTETHQLAELNEK ddPTM_A549_MK2206_60min_R1 1 DVNPGGKEETPGQRPAVTETHQLAELNEK 29 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1;I3L1C0 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DVNPGGKEET(0.999)PGQRPAVT(0.001)ETHQLAELNEK 139.16 2.8924e-28 9409000.0 1600.3 1763.9 1768.5 1500.1 2539.0 1893.8 1665.4 2058.9 2861.0 2439.0 3230.4 True False 1870.3915164214088 1853.6749757739478 2019.2998927352003 1867.624567342049 2165.516463392962 2094.200658997301 1967.9816227132287 2350.7553801168046 2212.988068078189 1888.0282060409343 2428.2025254955975 0.7702782188811294 0.7633938917000392 0.8316027479310277 0.7691387138150125 0.8918187180251693 0.8624489254947437 0.8104684852477709 0.9681051540941851 0.9113688190512514 0.777541488494905 1.0 11.245673040004856 -5.215438290330628 0.10987698452462723 1.0956575767128551 0.4420645047312008 0.07856962792154776 0.07638906052411716 11.968841163274698 0.1996466723429353 0.24757915753606158 1.2382261198035114 6.089220624250665e-06 5.215438290330628 -0.6535930719816543 DVNPGGKEET(ph)PGQRPAVTETHQLAELNEK ddPTM_A549_PD325901_60min_R1 1 DVNPGGKEETPGQRPAVTETHQLAELNEK 29 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1;I3L1C0 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DVNPGGKEET(0.983)PGQRPAVT(0.016)ET(0.001)HQLAELNEK 132.73 1.617e-27 17442000.0 2763.2 2806.8 3404.9 3092.4 4118.4 3572.3 3899.3 3317.8 4328.5 3991.8 4104.6 True False 3043.718029839674 3043.3388864654553 3635.9769893270086 3283.410524650035 3829.1377917086943 3543.208373192292 4047.689995278832 3251.6238762362514 4146.5881977642175 3739.7570667551495 3599.7602212031916 0.8455335474600958 0.8454282228409766 1.0100608834750977 0.9121192309727176 1.0637202359075002 0.9842901069694032 1.1244332251457358 0.9032890182750621 1.1519067779404077 1.0388906029705405 1.0 11.813685096994295 -5.672661750102353 0.5759043090573871 1.0628232435580287 0.7397329790084538 0.4480868365381284 0.07360971987750403 1.5675875520848312 0.46003791851255577 0.01429201607053502 0.3057614240759674 2.1248987933451333e-06 5.672661750102353 -0.3230902645495749 DVNSS(ph)SPVMLAFK ddPTM_A549_MK2206_60min_R1 4 DVNSSSPVMLAFK 13 0 Q99598;Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8 Q99598 TSNAX;TRAX;DISC1 Translin-associated protein X 1 DVNS(0.097)S(0.452)S(0.452)PVMLAFK;DVNS(0.017)S(0.595)S(0.389)PVMLAFK;DVNS(0.139)S(0.777)S(0.085)PVMLAFK;DVNS(0.097)S(0.452)S(0.452)PVMLAFK 78.655 0.00038298 4936300.0 5230.400000000001 6186.6 5849.700000000001 5381.7 8720.1 6753.4 6923.1 6806.6 10384.6 7914.8 8142.700000000001 True False 6113.163648997399 6501.471514894892 6679.275421279672 6700.216741593691 7437.384841446617 7468.040305455894 8180.937655942085 7771.456394338262 8032.504680798592 6126.841182932669 6120.642862912643 0.9987780345818633 1.062220368107056 1.0912702425021399 1.0946916674705711 1.215131320030552 1.2201398566656545 1.3366141170421117 1.2697124417156473 1.3123629103522219 1.0010126910128319 1.0 12.579467474578076 -6.296483437646489 1.576636454635113 1.1834340334155637 1.033284618081901 0.26747258565595344 0.10521892222471493 0.575552435642614 2.6840784742293895 0.01959063730560965 0.07168912808310715 5.052619133564201e-07 6.296483437646489 -0.15014941533366266 DVNSS(ph)SPVMLAFK ddPTM_A549_PD325901_60min_R1 1 DVNSSSPVMLAFK 13 0 Q99598;Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8 Q99598 TSNAX;TRAX;DISC1 Translin-associated protein X 1 DVNS(0.036)S(0.634)S(0.33)PVMLAFK 68.557 0.0013421 2815600.0 3690.5 3631.1 4359.2 4001.0 4745.5 4509.9 4857.2 4141.9 4482.2 5167.0 4247.2 True False 4065.1568431974943 3937.1055403465575 4655.041525999084 4248.132683069716 4412.192451086247 4473.172869652578 5042.043403961825 4059.2865552423077 4293.828721270367 4840.754738194266 3724.821325219067 1.091369622396159 1.0569917847307764 1.2497355227435796 1.140493009505596 1.1845380129278427 1.2009093803686002 1.353633627960742 1.0897936305719496 1.1527609907618415 1.2995938101566704 1.0 11.862955507712643 -10.295538921793527 0.7062152429691247 0.99986332041758 1.173842780659991 0.0 0.11739130097030133 0.5700035910216726 0.5238102294795728 0.052865905600103506 0.01646718114420566 5.0636196695529086e-11 10.295538921793527 0.17397946024241095 DVNSSS(ph)PVMLAFK ddPTM_A549_PD325901_60min_R1 1 DVNSSSPVMLAFK 13 0 Q99598;Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8 Q99598 TSNAX;TRAX;DISC1 Translin-associated protein X 1 DVNS(0.006)S(0.044)S(0.951)PVMLAFK 72.434 0.00060897 7080700.0 5015.0 5258.3 5227.1 5470.3 5924.6 4821.8 5174.9 5579.6 5096.8 5681.6 6006.9 True False 5524.119108152128 5701.4353950054565 5581.842439105759 5808.188007047308 5508.476534760425 4782.532859462693 5371.8336513139375 5468.310500888474 4882.59922059944 5322.862806372077 5268.089380876442 1.04860011073561 1.0822586677633248 1.0595572769452744 1.1025226770319168 1.045630803979258 0.9078306220132946 1.019692959427396 1.0380064014742896 0.9268254328264891 1.010397208842824 1.0 12.3630641079052 -7.058387527676789 7.456953731983748 0.9716865422304409 1.0731075987935639 0.5293784052613919 0.03911700753543635 0.15067638271015735 17.154286533249707 0.006080340127190638 0.010610807407522196 8.74203361924023e-08 7.058387527676789 0.10142105656312295 DVPDGPLLREET(ph)YDVPPAFAK ddPTM_A549_MK2206_60min_R1 1 DVPDGPLLREETYDVPPAFAK 21 1 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 DVPDGPLLREET(0.545)Y(0.455)DVPPAFAK 77.87100000000001 8.480799999999999e-05 5806800.0 1246.0 1664.4 1646.8 1247.5 1711.5 1593.7 1683.5 1555.1 2216.4 2108.1 1985.8 True False 1456.2943382247558 1749.1108507728102 1880.3410027460156 1553.137556002404 1459.7406172103415 1762.3442761875579 1989.3701584230323 1775.540187294014 1714.3889388635087 1631.8787458609643 1492.6710547081339 0.9756297836896886 1.1717992690056007 1.259715592939989 1.0405089259978269 0.9779385837261838 1.180664869616671 1.3327585821057 1.1895053378932108 1.1485376724202159 1.09326079628445 1.0 10.543680553263437 -10.509054042668216 0.9494478712513543 1.0047169071729227 1.145180466344705 0.08364044224574829 0.10761687497439888 0.6923688356276902 1.1688209709931743 0.060972010665169815 0.019815599550322027 3.097033887022961e-11 10.509054042668216 0.14046355917178222 DVPDGPLLREET(ph)YDVPPAFAK ddPTM_A549_PD325901_60min_R1 2 DVPDGPLLREETYDVPPAFAK 21 1 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 DVPDGPLLREET(0.551)Y(0.449)DVPPAFAK;DVPDGPLLREET(0.558)Y(0.442)DVPPAFAK 146.64 3.9426e-22 18184000.0 5181.1 4960.0 5403.200000000001 5093.5 5739.2 5460.4 5231.1 5822.4 5699.4 6304.1 5939.6 True False 5707.081457875768 5377.996607121517 5769.893644081087 5408.113926822196 5336.098391165148 5415.93231278985 5430.172373067756 5706.267664415561 5459.8740381973885 5906.0580501355635 5209.066854226591 1.0956053392259868 1.0324299452516832 1.1076635807427668 1.0382116563610813 1.0243866205778267 1.0397125750834642 1.0424462816524924 1.0954491128839219 1.0481481983221803 1.1338034652681488 1.0 12.346809237711968 -14.999999999989479 0.18763539692649148 0.7425568873171062 1.0677688597715747 0.0 0.04921513085299107 37.399731126229824 0.4253976089173961 3.5071855072276263 0.027455000898658842 1.0000000000242264e-15 14.999999999989479 0.3252119724544684 DVPDGPLLREETY(ph)DVPPAFAK ddPTM_A549_MK2206_60min_R1 1 DVPDGPLLREETYDVPPAFAK 21 1 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 DVPDGPLLREET(0.301)Y(0.699)DVPPAFAK 130.11 1.5834e-17 6050700.0 1531.0 1185.7 1432.3 1295.5 1931.5 1565.3 1113.5 1670.3 1955.0 1906.5 1893.2 True False 1789.3953706437408 1246.0470654658252 1635.421677333688 1612.8975581572042 1647.3789086425782 1730.9390070379525 1315.8085366225403 1907.0701400792173 1512.1956214934853 1475.8203258782446 1423.0661903381208 1.2574224465402977 0.8756072443613914 1.1492239000809312 1.1333960212869505 1.1576263422091144 1.2163446920390126 0.9246291884075356 1.340113448711825 1.062631964528781 1.037070753207614 1.0 10.474787051411747 -8.986981748688832 19.602426579327336 1.0276299018522443 1.1257078240475207 0.11068372076471167 0.12684991893612302 10.709613425496682 16129.026275493194 0.0209131380333562 0.021102704563248285 1.0304294235312417e-09 8.986981748688832 0.09807792219527633 DVPGGGPSSSAPAGAEADGPKAS(ph)PEARPQIPTKPR ddPTM_A549_MK2206_60min_R1 1 DVPGGGPSSSAPAGAEADGPKASPEARPQIPTKPR 35 3 Q8N3F8;B0QY86 Q8N3F8 MICALL1 MICAL-like protein 1 1 DVPGGGPSSSAPAGAEADGPKAS(0.98)PEARPQIPT(0.02)KPR 82.266 1.2993e-06 9671200.0 746.12 665.65 731.32 509.54 1289.5 929.6 740.68 635.45 1376.7 919.72 1159.6 True False 872.0468151173797 699.5287417789716 835.032172776425 634.3773228741201 1099.8162581903207 1027.9696549814616 875.251968482787 725.5269834840078 1064.8796481381487 711.9546132267187 871.6393166681195 1.000467508109682 0.8025438141695486 0.9580019588473511 0.7277979672819899 1.2617790835714224 1.1793520959000816 1.0041446636763438 0.8323706487419216 1.2216975849697775 0.8167995633196048 1.0 9.76758746273478 -6.757763889619726 24.999812727086493 1.0930646791048846 0.8733556993871711 0.18605931974021117 0.15457625862263355 81.55996547908794 554742.9913794419 0.019954426331369363 0.04030852599298935 1.7467715520515932e-07 6.757763889619726 -0.21970897971771353 DVPPDILLDS(ph)PER ddPTM_A549_MK2206_60min_R1 3 DVPPDILLDSPER 13 0 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER 200.63 1.5149999999999998e-30 14891000.0 7525.6900000000005 8644.15 8322.54 7337.08 11010.5 8377.35 8401.01 9049.009999999998 12093.24 11197.689999999999 12172.6 True False 8795.842486544667 9084.10031285015 9502.801317096078 9134.664929374041 9390.870035521153 9263.83561656513 9927.364772565186 10331.734878930869 9354.140448935994 8668.12405186654 9149.807473330768 0.9613144880023089 0.9928187384628435 1.0385793739151554 0.9983450423409604 1.026346189566613 1.0124623543792286 1.084980727900646 1.1291751120496363 1.0223319426338535 0.9473558954253185 1.0 13.159525671753505 -5.505575043230879 3.1072745704545146 1.0253763736817068 0.9627609092299749 0.17490567311353722 0.04493146048986994 0.3560796740455258 6.4160270419301995 0.005880494522276021 0.040459959001389205 3.1219429084067536e-06 5.505575043230879 -0.06261546445173183 DVPPDILLDS(ph)PER ddPTM_A549_PD325901_60min_R1 2 DVPPDILLDSPER 13 0 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PER;DVPPDILLDS(1)PER 212.03 1.9925999999999996e-37 20386200.0 11663.6 11436.2 12218.3 11862.8 13817.7 13513.8 12878.5 13850.099999999999 13246.3 14093.2 15293.1 True False 12847.680085711498 12399.968709347393 13047.507312606593 12595.538213626449 12847.192420477186 13403.748093286105 13368.598364885607 13573.848890306743 12689.604076249077 13203.352946839437 13412.145650948332 0.9579138506300875 0.9245328101898915 0.9728128259391549 0.9391143327418202 0.957877490658536 0.9993738840987286 0.9967531454551684 1.012056478028702 0.9461278162716518 0.984432565113537 1.0 13.711252435014176 -7.055324826816922 7.06874896826604 0.9804635156517151 0.9485644442903566 0.4534644345813881 0.02031651258602988 0.26663099481027963 29.230613303851662 0.003709008006552898 0.006488974095754639 8.80390146467536e-08 7.055324826816922 -0.0318990713613585 DVPPDILLDS(ph)PERK ddPTM_A549_MK2206_60min_R1 2 DVPPDILLDSPERK 14 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK 211.12 1.2057e-38 32768000.0 12343.0 13495.9 11913.400000000001 11257.9 17809.9 13497.8 12509.7 12862.8 19289.7 17758.9 18115.9 True False 14426.196642622925 14182.783664350376 13602.89926045323 14016.086005386333 15190.087302631868 14926.128236885497 14782.550561820386 14686.141290672902 14920.613749321168 13747.152155908296 13617.222056595368 1.0594081952005576 1.0415328181771908 0.9989481851670914 1.029291139347895 1.1155055884011744 1.0961213803263326 1.0855775502802059 1.0784975988226477 1.095716416116936 1.0095416009794742 1.0 13.733144799937735 -4.855195086691334 16.512420224973663 1.054003039950467 2.391625114959137 0.0003201060596597083 0.0399816166620189 1906.537099181765 228807.49942966312 0.006301083343287785 5063.803675224191 1.3957412480726675e-05 4.855195086691334 1.3376220750086703 DVPPDILLDS(ph)PERK ddPTM_A549_PD325901_60min_R1 3 DVPPDILLDSPERK 14 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK 196.71 1.2921e-31 67887500.0 20390.550000000003 19436.020000000004 19969.299999999996 20402.5 23647.6 20745.95 20891.489999999998 22819.6 22801.32 22496.36 23133.7 True False 22460.58362527046 21073.96161611812 21324.536783155963 21662.716087560573 21986.674155791214 20577.00186149781 21686.52708421198 22364.445176370114 21843.059814126194 21075.93599034719 20288.401556606794 1.1070652147042264 1.0387196624297645 1.0510703232907848 1.0677389259631567 1.0837065746380294 1.0142248912062288 1.0689125520166913 1.1023266231186788 1.0766279321306678 1.0388169778453513 1.0 14.308367584851164 -10.71569939752923 0.9672790678040201 0.9998971731154771 1.0665606729533241 0.2791975380153948 0.027630297574482914 0.3788592458718482 0.6288875489573487 0.017342073556203774 0.004485774070486103 1.9244232821772118e-11 10.71569939752923 0.06666349983784703 DVPPLS(ph)ETEATPVPIKDMEIAQTQK ddPTM_A549_PD325901_60min_R1 1 DVPPLSETEATPVPIKDMEIAQTQK 25 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DVPPLS(0.333)ET(0.333)EAT(0.333)PVPIKDMEIAQTQK 49.088 0.0026506 2491400.0 1130.1 893.83 982.77 985.15 1212.5 1298.0 1001.5 922.72 1227.2 962.14 1043.6 True False 1244.8269200643506 969.1561909966574 1049.4666820760965 1046.0004780620177 1127.3381828979193 1287.4295183505287 1039.6126305418281 904.3156257401638 1175.6250517029573 901.39031620016 915.2438159254615 1.3601041584811218 1.0589049323613093 1.1466525791435298 1.142865387191215 1.2317353728940474 1.4066519718013353 1.1358859928385414 0.9880598043984078 1.2844938487939497 0.9848635964709651 1.0 9.838012310406365 -10.990133657543684 1.1814337583633963 0.9966530090911878 1.1973724219657302 0.30438439567482645 0.1175739265361992 0.5414530576473108 1.3065840199228946 0.09096831583852971 0.019399862677945533 1.0229781142670447e-11 10.990133657543684 0.20071941287454242 DVQEIFR ddPTM_A549_PD325901_60min_R1 2 DVQEIFR 7 0 Q13838-2;Q5STU3;F6S4E6;A0A0A0MT12;F6TRA5;K7EQN7;F6WLT2;O00148;Q13838;O00148-3;O00148-2;A0A0G2JJZ9;A0A140T9X3;A0A140TA18;F6UJC5;A0A140T996;A0A140T9K1;A0A140T973;A0A140T9L4;A0A140T9X9 Q13838-2 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 ; 93.429 0.033655000000000004 7830900.0 2285.44 2472.9 2171.2 2024.98 2660.0 2795.6 2474.1 2595.5 2546.2 2419.8 2499.8 False True 2517.456186347996 2681.299961643306 2318.5506884862384 2150.058415536744 2473.170776501828 2772.8335604782274 2568.253229379467 2543.7307163696405 2439.192068649012 2267.0134150343492 2192.3404475378197 1.1482961914858199 1.223030832029135 1.0575687234572364 0.9807137472427871 1.1280961309085933 1.2647823761096728 1.1714664263316532 1.1602808857659226 1.112597302753971 1.034060844692435 1.0 11.098256135805583 -10.110801897112117 0.7972648537609351 1.0066212779383688 1.1394008248298102 0.29286925326459246 0.07247747372470069 0.5561044635977385 0.6995654347762952 0.038282567954724775 0.01580945969572579 7.748151481725974e-11 10.110801897112117 0.13277954689144145 DVQIGDIVTVGECRPLSK ddPTM_A549_PD325901_60min_R1 1 DVQIGDIVTVGECRPLSK 18 1 P62280;M0R1H5 P62280 RPS11 40S ribosomal protein S11 0 58.672 0.005306399999999999 1560800.0 1189.3 1491.8 1438.1 1618.2 1601.3 1280.0 1445.5 1536.4 1043.9 1600.3 1735.9 False True 1310.0368604836137 1617.5192214725562 1535.6981139978177 1718.1525388011546 1488.8302121851034 1269.576104382647 1500.5092935079513 1505.755296717516 1000.0285132600369 1499.2567848910928 1522.3953047767425 0.8605103131710782 1.0624830596871575 1.008738078197782 1.1285850221753801 0.9779524460655366 0.8339332763305052 0.9856239629745832 0.9890698506445627 0.6568783482990904 0.9848012406416066 1.0 10.572127301974051 -7.643385286987952 1.1125118207032554 0.8479221434795 1.0150567035134062 0.03099756492072636 0.11966221857983365 0.5890648920817906 1.4698002834817576 0.02559578722642393 0.045303936980134706 2.2730799593035387e-08 7.643385286987952 0.16713456003390614 DVQKELS(ph)ALK ddPTM_A549_PD325901_60min_R1 1 DVQKELSALK 10 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DVQKELS(1)ALK 54.523999999999994 0.0053008000000000005 3024700.0 1177.0 1529.8 983.23 1308.3 1685.9 1678.2 1365.8 1572.6 1565.9 1430.1 1761.2 True False 1296.488173538396 1658.7216148335665 1049.9579004423015 1389.1107196351193 1567.4882000392606 1664.5332956054376 1417.7762663944366 1541.233259319166 1500.0906685639338 1339.8032419376063 1544.5835651666557 0.8393771646783701 1.0738956779296014 0.6797676241809645 0.8993431957727963 1.014829003356729 1.0776582977728626 0.917901949993533 0.9978309326066614 0.9711942444513054 0.8674203663387068 1.0 10.593002210525805 -6.661468817015924 5.642755097711392 0.9902374899783912 0.8707640662835315 0.2036529295296553 0.09909783242047518 0.2041203014693566 9.693546934885008 0.012078411195511757 0.025371069640911154 2.180374945701272e-07 6.661468817015924 -0.11947342369485969 DVRLS(ph)ASLPDTVGQLK ddPTM_A549_PD325901_60min_R1 2 DVRLSASLPDTVGQLK 16 1 Q9HAC8 Q9HAC8 UBTD1 Ubiquitin domain-containing protein 1 1 DVRLS(0.951)AS(0.049)LPDTVGQLK;DVRLS(0.891)AS(0.1)LPDT(0.009)VGQLK 90.71799999999999 2.86e-06 5163500.0 2478.2 2372.1 2094.7200000000003 1933.54 2374.1 2227.7 2169.3 2050.3599999999997 2155.16 2941.1 2807.5 True False 2729.785039645582 2572.0051918856752 2236.8802957746398 2052.9703744120525 2207.3514062003715 2209.5583497915795 2251.853898586509 2009.463961323696 2064.586119970784 2755.398444068733 2462.1952982088274 1.108679332476761 1.044598368682099 0.9084901987270882 0.8337967243725656 0.8964972875247357 0.8973936191816166 0.9145716021083561 0.8161269590537843 0.8385143621518195 1.1190820021763515 1.0 11.265729483764238 -5.665819867277473 3.3643023156023695 0.9038991982175514 1.096945199891594 0.3776494295937708 0.08143170798000435 0.14689151168805534 3.145390691087974 0.009499008646917094 0.04511734375758377 2.158639564419293e-06 5.665819867277473 0.19304600167404262 DVS(ph)AHPR ddPTM_A549_MK2206_60min_R1 4 DVSAHPR 7 0 Q2NKX9 Q2NKX9 C2orf68 UPF0561 protein C2orf68 1 DVS(1)AHPR;DVS(1)AHPR;DVS(1)AHPR;DVS(1)AHPR 67.993 0.0071023 18305600.0 1627.769 1785.1599999999999 1241.1100000000001 1338.44 2163.62 1846.72 1508.81 1956.46 2348.74 2368.87 2225.37 True False 1902.4966120688377 1876.0170189651446 1417.1180604312046 1666.3578600848546 1845.3543641300832 2042.1386846464768 1782.9412466470178 2233.7941964074635 1816.7541401670633 1833.740621748333 1672.749211912499 1.1373471878032824 1.1215172038970767 0.8471790333776188 0.9961791332603068 1.1031865093633733 1.2208277667108538 1.0658748089371588 1.3354029286036886 1.086088773636258 1.096243602262271 1.0 10.708005449194863 -5.5503947558545725 24.995645359446264 1.0636405974258085 1.133390760361238 0.0002645719583693751 0.11953347003837196 509.67341657727843 462988.71775368147 0.01692189484229354 0.06554135177860654 2.8158223008157925e-06 5.5503947558545725 0.06975016293542957 DVS(ph)AHPR ddPTM_A549_PD325901_60min_R1 4 DVSAHPR 7 0 Q2NKX9 Q2NKX9 C2orf68 UPF0561 protein C2orf68 1 DVS(1)AHPR;DVS(1)AHPR;DVS(1)AHPR;DVS(1)AHPR 60.019 0.008945100000000001 14729700.0 2055.19 2117.58 1883.6399999999999 2115.12 2180.4300000000003 1484.03 1774.24 1945.6799999999998 2271.82 2141.41 2367.11 True False 2263.831375849086 2296.0358982476573 2011.475137647485 2245.7661586139525 2027.2841188751436 1471.9445517085792 1841.759674101382 1906.8718860435667 2176.3433058668606 2006.201007144682 2075.970476346608 1.0904930497051597 1.1060060460437429 0.9689324393415147 1.0817909908652261 0.9765476638390614 0.7090392510297052 0.8871800900283509 0.9185448000201675 1.0483498347707207 0.966391877920774 1.0 11.019570211049976 -5.759046581065401 24.934995922959374 0.9844917565473429 1.0982495901013438 0.19565946507905962 0.09734254602289218 87.03081344062792 906870.658562622 0.014853129818476482 0.052544955148256724 1.741620062662336e-06 5.759046581065401 0.11375783355400093 DVS(ph)GLR ddPTM_A549_MK2206_60min_R1 2 DVSGLR 6 0 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 DVS(1)GLR;DVS(1)GLR 81.613 0.042166 500910000.0 7738.8 8950.9 7486.4 7130.0 9439.0 8024.3 7947.5 7970.5 11651.9 11770.7 11954.1 True False 9044.920244505409 9406.462577614959 8548.08409215313 8876.850320077863 8050.535603767695 8873.42609990075 9391.457875893704 9100.342783632523 9012.763254260833 9111.690694893816 8985.567053623985 1.006605391794109 1.0468412868636066 0.9513127041554476 0.9879009601845579 0.895940740937526 0.9875198801529161 1.0451714198834028 1.0127733429981192 1.0030266537965324 1.0140362472971545 1.0 13.13339383565798 -7.5322705978922295 24.91343457311327 1.0059517109806102 0.9767659394445258 0.17465242253094804 0.036679911024167046 327.4899835305939 868717.442644985 0.005666814889414123 0.008411546167528447 2.935819846977475e-08 7.5322705978922295 -0.02918577153608437 DVS(ph)GLR ddPTM_A549_PD325901_60min_R1 2 DVSGLR 6 0 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 DVS(1)GLR;DVS(1)GLR 85.35700000000001 0.039966 701010000.0 8115.0 7414.3 8175.200000000001 7358.0 9049.5 8908.7 8008.3 8760.3 8693.3 9196.0 9597.7 True False 8938.828826052742 8039.129081488112 8730.018233471217 7812.486948769554 8413.894339080181 8836.150500870068 8313.060238809905 8585.568944177601 8327.950832765086 8615.362990600821 8417.24374483308 1.0619662560609389 0.9550785655248402 1.0371587776378857 0.9281526335227306 0.9996020780846515 1.0497676874682562 0.9876226103007736 1.0199976624709064 0.9893916684873469 1.0235373064834146 1.0 13.039132179873189 DVS(ph)GLRDVK ddPTM_A549_MK2206_60min_R1 2 DVSGLRDVK 9 1 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 DVS(1)GLRDVK;DVS(1)GLRDVK 81.625 0.00044004 37694000.0 2986.8 4004.2 4228.7 4776.0 4537.6 2151.69 2119.3 1604.63 5468.2 7380.6 7806.8 True False 3490.898819750963 4207.996676678974 4828.393246485352 5946.12021440279 3870.1250509223746 2379.3804076237748 2504.3493773364617 1832.0912164732763 4229.661430921064 5713.317333950684 5868.15610328103 0.5948885405074885 0.7170901050717073 0.8228126794012313 1.0132859640659813 0.6595129684362849 0.4054732637895241 0.4267693860318778 0.3122090115238941 0.7207820235995693 0.9736137269348081 1.0 12.518691534411273 -9.945544228425234 1.0937035806993758 0.9586751637913236 0.634264110960861 0.3366678978130737 0.1906945599913562 0.42085771783578213 1.018489204285596 0.07055697560041997 0.04063278920022392 1.133589387809302e-10 9.945544228425234 -0.32441105283046257 DVS(ph)GLRDVK ddPTM_A549_PD325901_60min_R1 2 DVSGLRDVK 9 1 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 DVS(1)GLRDVK;DVS(1)GLRDVK 115.33 5.7528e-05 86577000.0 3903.5 4284.4 4146.4 4615.0 3839.8 7508.5 6474.0 7234.9 5420.299999999999 4499.1 6198.700000000001 True False 4299.78044639518 4645.461424103106 4427.799638328733 4900.058068574545 3570.1056945908726 7447.353265435241 6720.371612708729 7090.5942438307475 5192.503640600992 4215.026058178791 5436.299196796817 0.790938888891307 0.8545264445415937 0.8144878488177557 0.9013591583520207 0.6567161897002385 1.369930718644658 1.2362034114436737 1.3043053715676054 0.9551541319985709 0.7753484320109484 1.0 12.408409144346582 -7.232526564244581 24.999874821542694 1.0513459159408562 0.8124699640393899 0.4185667856533999 0.1711240874521256 681.5727629659469 589331.9787138017 0.02510086781801742 0.04347116695138761 5.854279266870219e-08 7.232526564244581 -0.23887595190146638 DVS(ph)GSWER ddPTM_A549_MK2206_60min_R1 2 DVSGSWER 8 0 Q86VR2;K7ENZ6;K7EMF4;K7ELM8;K7EJ34;K7ENF4 Q86VR2 FAM134C Protein FAM134C 1 DVS(0.991)GS(0.009)WER;DVS(0.981)GS(0.019)WER 116.52 0.0012831 16340800.0 2935.52 2720.96 1771.43 2234.2799999999997 3822.3999999999996 3087.82 2587.0299999999997 3157.0 4286.5 4219.8 4240.9 True False 3430.9640094265933 2859.4452418401715 2022.64541079328 2781.678700300642 3260.130023502661 3414.5710628709717 3057.059863941277 3604.514417907017 3315.614594133925 3266.544249221619 3187.7674871143745 1.0762905460624936 0.8970055856955219 0.6345021771409732 0.8726102865233338 1.0227000672667599 1.0711480924105616 0.9589971277072605 1.1307331643469045 1.0401055307629352 1.0247122045210877 1.0 11.638330688952745 -6.746860918651331 5.704501245098552 1.027788079558079 0.8537752004442377 0.3675637753213816 0.10344691322901342 0.1346696744514465 13.89284073991617 0.014531780077137275 0.029626538628219116 1.7911793813740983e-07 6.746860918651331 -0.17401287911384122 DVS(ph)GSWER ddPTM_A549_PD325901_60min_R1 3 DVSGSWER 8 0 Q86VR2;K7ENZ6;K7EMF4;K7ELM8;K7EJ34;K7ENF4 Q86VR2 FAM134C Protein FAM134C 1 DVS(0.868)GS(0.132)WER;DVS(0.558)GS(0.442)WER;DVS(0.963)GS(0.037)WER 119.68 0.0012171 21553290.0 7571.179999999999 7132.21 6588.49 6031.4400000000005 5600.74 5970.6900000000005 5793.610000000001 5690.41 7982.02 9044.99 9622.54 True False 8339.800619991867 7733.266367193172 7035.624551208875 6403.988350405902 5207.363343904074 5922.066680215958 6014.088998935042 5576.910308509712 7646.563457622261 8473.887787772344 8439.028582306815 0.9882417790925618 0.9163692588275697 0.8337007610046133 0.7588537339276752 0.6170571995480358 0.7017474372147648 0.7126518106057991 0.6608474250463149 0.9060952197334621 1.0041307130465957 1.0 13.042861224335473 -8.955937930060301 4.804660875497165 0.9602347324153087 0.7701269713242688 0.416174113603078 0.1047358189583244 0.16072121312920656 7.61428895107861 0.020635313121503608 0.021435485341354702 1.106781955410028e-09 8.955937930060301 -0.19010776109103988 DVS(ph)LGTYGSR ddPTM_A549_MK2206_60min_R1 1 DVSLGTYGSR 10 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DVS(0.999)LGT(0.001)YGSR 115.29 8.9433e-05 4260700.0 854.71 925.25 726.9 724.66 1320.3 977.13 711.06 1137.8 1080.6 1148.1 1359.0 True False 998.9641523467745 972.3412729377203 829.9853503133827 902.2017325312236 1126.085618990834 1080.5292480336004 840.2503978902769 1299.0866343663613 835.8458253636111 888.7434126099199 1021.5227935080842 0.9779166541317796 0.9518547007634884 0.812498121028774 0.8831929529765149 1.1023597575573063 1.0577632284864422 0.822546891004471 1.2717157586910766 0.8182351198382695 0.8700181907422965 1.0 9.996505680328136 -5.304533476059229 5.716368344690279 0.9434264647395353 0.978237963336385 0.0 0.1367795582346576 1.211008206459413 103.35490966331794 0.018385709138024613 0.12082468567166194 4.959826948448135e-06 5.304533476059229 0.03481149859684973 DVS(ph)PER ddPTM_A549_MK2206_60min_R1 2 DVSPER 6 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 DVS(1)PER;DVS(1)PER 75.738 0.045617000000000005 15943000.0 1817.21 1787.0900000000001 1597.3899999999999 943.2099999999999 366.174 350.96 0.0 89.01899999999999 427.40999999999997 2534.79 2521.57 True False 2123.9106214810645 1878.04524772145 1823.923921773413 1174.2964923423056 312.31028966776466 388.0983542516064 0.0 101.63771585925393 330.6023174335195 1962.1791785118883 1895.3945772083744 1.1205638377467868 0.9908465869346966 0.962292466015057 0.6195525229748543 0.1647732316126755 0.204758607478563 0.0 0.05362351305708108 0.17442400722726875 1.0352351969909492 1.0 10.888282499984498 -6.310541613803152 3.1317368478174457 0.4537504316817436 1.0361346410976604 0.4040075903408288 0.33596748272681193 0.267054944296688 5.220053739753318 0.05883391999114586 0.15668279606536697 4.891683911047637e-07 6.310541613803152 0.5823842094159168 DVS(ph)PER ddPTM_A549_PD325901_60min_R1 2 DVSPER 6 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 DVS(1)PER;DVS(1)PER 72.789 0.047746 35207000.0 1124.41 1267.23 1049.59 1063.83 1371.6999999999998 1113.42 776.16 958.49 863.22 1129.67 1208.34 True False 1238.5592754531067 1374.023919444071 1120.8214890973993 1129.5403629667728 1275.3565241081044 1104.3526766732239 805.6971935310486 939.3721650291407 826.9418653284116 1058.3424434093124 1059.721840298364 1.1687588462878062 1.2965892248264086 1.0576563079815668 1.0658838197094735 1.203482343771483 1.0421156143788581 0.7602912036843603 0.8864327687770038 0.7803386076251733 0.9986983406054336 1.0 10.049469915219598 -7.546770592438922 5.727964961241405 0.8835955169633725 1.1529684189844238 0.6676760816515299 0.09193126721846143 0.0900573961533385 9.088971254703685 0.016022447426339532 0.024225567888401578 2.839418499629559e-08 7.546770592438922 0.26937290202105135 DVS(ph)PFDHSR ddPTM_A549_MK2206_60min_R1 2 DVSPFDHSR 9 0 P18031 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 1 DVS(1)PFDHSR;DVS(1)PFDHSR 73.95100000000001 0.00067368 5023600.0 717.13 462.34000000000003 533.88 418.38 667.5799999999999 802.02 553.16 616.6400000000001 713.3199999999999 951.04 914.05 True False 838.1640118548307 485.8711311861939 609.5922118933947 520.8831187817917 569.3798663378784 886.8892240622108 653.6620117809828 704.0506083807987 551.7541589379706 736.1994034740343 687.0661585033589 1.219917472984857 0.7071678981316304 0.8872394664602223 0.7581265826226038 0.8287118486204628 1.2908352610382208 0.9513814698789115 1.0247202538900142 0.803058267547132 1.071511665015932 1.0 9.424305214508383 -5.231018074677539 23.668423533985074 0.9146970683087974 1.2199185134221142 0.20778658189797217 0.15811143466014166 6762.67408842142 5261331.543941552 0.020963723062784358 3.293461843942109 5.874649026228963e-06 5.231018074677539 0.30522144511331684 DVS(ph)PFDHSR ddPTM_A549_PD325901_60min_R1 2 DVSPFDHSR 9 0 P18031 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 1 DVS(1)PFDHSR;DVS(1)PFDHSR 75.819 0.00062778 9150700.0 1604.7600000000002 825.85 1107.86 1189.1799999999998 1413.69 1388.8000000000002 1101.6 1446.3600000000001 1044.21 1290.29 1345.03 True False 1767.674053838127 895.4472778208273 1183.0460417033744 1262.6329477762667 1314.3972913657394 1377.4900732551723 1143.52199081865 1417.5112151525311 1000.3254850380907 1208.8208691977316 1179.5998368476646 1.4985370450389501 0.759111056011842 1.0029215033336385 1.0703909142192642 1.1142738836572785 1.1677604813309783 0.9694151822490683 1.2016882088934968 0.8480210439087017 1.0247719874463161 1.0 10.204081812632936 -8.770806313328583 24.9999282543481 0.9282321628198396 1.08120559946503 0.10075916886758618 0.1759800236394321 273.0745906795592 728821.6813646795 0.02827996876895163 0.030304012110006995 1.6950936098166903e-09 8.770806313328583 0.15297343664519047 DVS(ph)SPDENNGQSK ddPTM_A549_PD325901_60min_R1 2 DVSSPDENNGQSK 13 0 J3QL74;J3QLI2;O43829 J3QL74 ZBTB14 Zinc finger and BTB domain-containing protein 14 1 DVS(0.5)S(0.5)PDENNGQSK;DVS(0.936)S(0.064)PDENNGQSK 249.33 1.3562999999999998e-68 14239900.0 4829.799999999999 4693.2 4285.7 5043.1 5841.9 5834.299999999999 5423.200000000001 4718.1 5562.1 5197.4 5104.6 True False 5320.117740489161 5088.71243478683 4576.553374007682 5354.600833288903 5431.585097460913 5786.787395155996 5629.58284368891 4623.993794222152 5328.344279723775 4869.235277006164 4476.766560725482 1.1883839973168067 1.13669371984457 1.0222899300038617 1.1960866756521618 1.2132830746887766 1.292626568006311 1.2575109216274631 1.0328869579192022 1.1902216046887846 1.0876678984613128 1.0 12.128241376085537 -10.808321395739032 0.6927627701018272 0.9791596271266103 1.1723343346503758 0.23672319228279814 0.08229988506336164 0.8458760148354643 0.5890198972783368 0.09878559581283015 0.016218178962067308 1.554814579150077e-11 10.808321395739032 0.19317470752376553 DVSHS(ph)SPVDLKIPQVR ddPTM_A549_PD325901_60min_R1 1 DVSHSSPVDLKIPQVR 16 1 Q96JN0-2;Q96JN0 Q96JN0-2 LCOR Ligand-dependent corepressor 1 DVS(0.001)HS(0.499)S(0.499)PVDLKIPQVR 100.77 5.3734e-07 7621300.0 867.36 904.29 800.19 824.48 922.53 906.99 762.55 882.82 770.46 755.41 990.95 True False 955.4137486833152 980.4976919060307 854.4957053333655 875.4062570700626 857.7346753557254 899.6037741515761 791.5692575333707 865.211462541108 738.0802455468224 707.7132836809232 869.0694321496134 1.0993526102053 1.1282156012331528 0.9832306530673848 1.0072915059327023 0.9869575935194822 1.0351345253582755 0.9108239551993577 0.9955608039291374 0.8492764999468527 0.8143345715547936 1.0 9.763327631965637 -5.784870909709133 0.5364649358702699 0.9337122144282423 1.1852709079080062 0.5239116722266157 0.06238944957941252 1.6170635811040308 0.43234263735704825 0.012423637868347756 0.22704949977695288 1.6410774968489912e-06 5.784870909709133 0.2515586934797639 DVSHSS(ph)PVDLK ddPTM_A549_MK2206_60min_R1 1 DVSHSSPVDLK 11 0 Q96JN0-2;Q96JN0 Q96JN0-2 LCOR Ligand-dependent corepressor 1 DVS(0.045)HS(0.289)S(0.667)PVDLK 41.227 0.028092000000000002 6411400.0 1220.2 1657.6 1356.8 1591.4 2235.0 1563.1 1426.0 1645.7 2391.9 2237.6 2216.9 True False 1426.139928974195 1741.9647598179574 1549.2146420486972 1981.2930714406602 1906.2344606865968 1728.5062044981942 1685.085741557022 1878.9830147448756 1850.13846907942 1732.124605919309 1666.382546672607 0.8558298524080664 1.0453570599957802 0.9296872708743452 1.1889785304081941 1.1439356854120444 1.0372805499851365 1.0112238302794043 1.1275820300067256 1.1102723517920494 1.0394519610025765 1.0 10.702503918759177 -4.568461344742609 1.129189834851814 1.06499804463409 0.2280673668242499 0.43569467096084824 0.06941815666460291 5.16042430642006 1.7251520788101837 0.010750357609495338 7.513223963223841 2.7010875133744328e-05 4.568461344742609 -0.8369306778098402 DVSHSS(ph)PVDLK ddPTM_A549_PD325901_60min_R1 1 DVSHSSPVDLK 11 0 Q96JN0-2;Q96JN0 Q96JN0-2 LCOR Ligand-dependent corepressor 1 DVS(0.001)HS(0.037)S(0.962)PVDLK 83.53 2.1941999999999998e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DVSHSS(ph)PVDLKIPQVR ddPTM_A549_MK2206_60min_R1 2 DVSHSSPVDLKIPQVR 16 1 Q96JN0-2;Q96JN0 Q96JN0-2 LCOR Ligand-dependent corepressor 1 DVSHS(0.02)S(0.98)PVDLKIPQVR;DVSHS(0.021)S(0.979)PVDLKIPQVR 101.67 5.059399999999999e-07 11730200.0 1809.22 1674.56 1159.08 1174.38 2397.1 1378.8200000000002 1183.12 1361.11 2294.06 2526.7 2523.3 True False 2114.5721048178116 1759.7879513759412 1323.4549729553394 1462.1031527199225 2044.489765419169 1524.7258172133581 1398.0775894466644 1554.0515107245535 1774.4590728610465 1955.9167151306387 1896.6949704628028 1.114871994573722 0.9278181145524652 0.6977690106029067 0.770868893253385 1.0779222791529328 0.8038856226003055 0.7371125095067483 0.819347093194093 0.9355532125590389 1.03122365250612 1.0 10.889271965528138 -9.064487378896668 2.5545914154353317 0.9758548804301221 0.862677023612507 0.1506473005591895 0.12639653333725373 0.39394014660350446 5.285163650324745 0.024407464091221298 0.024014669946321513 8.620106293743607e-10 9.064487378896668 -0.11317785681761516 DVSHSS(ph)PVDLKIPQVR ddPTM_A549_PD325901_60min_R1 1 DVSHSSPVDLKIPQVR 16 1 Q96JN0-2;Q96JN0 Q96JN0-2 LCOR Ligand-dependent corepressor 1 DVS(0.001)HS(0.022)S(0.977)PVDLKIPQVR 93.152 3.3601e-06 7071500.0 919.18 994.25 1069.0 663.99 1185.1 958.18 941.16 1038.8 1404.3 1006.2 996.08 True False 1012.4944769354477 1078.038936820678 1141.5487684192099 705.0031542692981 1101.8626643730513 950.3768997635667 976.9763588225128 1018.0803190771645 1345.2821545847964 942.6683602808342 873.5684746713627 1.159032756208778 1.234063462771178 1.3067650693881343 0.8070382284966511 1.2613351973210494 1.087924904937875 1.1183741024881333 1.165427037027827 1.5399847792022177 1.0791007088888676 1.0 9.770776983010576 -8.54538101975861 24.961354193451417 1.2601355841367587 1.1394473642204965 0.0023897250065563203 0.1769801868385764 545.4946344028273 605103.9964327556 0.03724874059923209 0.042237470099054236 2.8485180793662876e-09 8.54538101975861 -0.12068821991626222 DVSLGDWEFGKRDS(ph)LGAYASQDANEQGQDLGK ddPTM_A549_PD325901_60min_R1 1 DVSLGDWEFGKRDSLGAYASQDANEQGQDLGK 32 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DVS(0.008)LGDWEFGKRDS(0.741)LGAY(0.094)AS(0.157)QDANEQGQDLGK 76.274 3.3895e-06 15585000.0 1216.0 1107.9 996.2 1155.8 992.86 997.14 968.18 836.18 1103.0 1271.6 1015.4 True False 1339.4474248281128 1201.2666211753888 1063.8081226372483 1227.1911409877475 923.1249387810544 989.0196224407133 1005.0246197084246 819.5017339294802 1056.6447457858224 1191.3109589873857 890.5122371509331 1.5041314076867534 1.3489613854366225 1.1946024751335824 1.3780733040951472 1.0366224070479493 1.1106187890297168 1.128591587830233 0.9202588125586676 1.1865583668635555 1.337781682595194 1.0 9.798491626318535 -2.000000000019844 0.346958069215772 1.0645272385918665 6.224516512233031 0.4713779644067616 0.1246580859645889 23.915563432330465 0.2945905265756081 0.02639486904289003 81.74665232622735 0.009999999999543072 2.000000000019844 5.159989273641164 DVSLGDWEFGKRDS(ph)LGAYASQDANEQGQDLGKR ddPTM_A549_MK2206_60min_R1 4 DVSLGDWEFGKRDSLGAYASQDANEQGQDLGKR 33 3 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DVSLGDWEFGKRDS(1)LGAYASQDANEQGQDLGKR;DVSLGDWEFGKRDS(1)LGAYASQDANEQGQDLGKR;DVS(0.003)LGDWEFGKRDS(0.997)LGAYASQDANEQGQDLGKR;DVS(0.002)LGDWEFGKRDS(0.776)LGAY(0.027)AS(0.194)QDANEQGQDLGKR 117.39 1.108e-21 36319100.0 4166.44 4564.64 4562.29 4069.8500000000004 7302.400000000001 4636.59 4740.02 3937.0099999999998 8136.0 7407.31 7636.4 True False 4869.633212321948 4796.960678846192 5209.291324640589 5066.963432702511 6228.226633430785 5127.2308762806515 5601.220278187317 4495.093224087458 6293.208990522248 5733.993526399779 5740.071126081781 0.8483576431997977 0.8356970799629511 0.9075307971308177 0.8827353043900803 1.0850434596761214 0.8932347289188629 0.9758102565552624 0.7831075827026982 1.0963642875307094 0.9989411978443287 1.0 12.486852898324324 -5.973517437740504 0.29746133425189947 1.042551879823677 0.7343844418613028 0.18750585220599247 0.08771175605214201 4.487344156798374 0.3907002434694754 0.041341558230283224 0.47496156479399126 1.0628759059516533e-06 5.973517437740504 -0.3081674379623742 DVSLGDWEFGKRDS(ph)LGAYASQDANEQGQDLGKR ddPTM_A549_PD325901_60min_R1 2 DVSLGDWEFGKRDSLGAYASQDANEQGQDLGKR 33 3 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DVSLGDWEFGKRDS(1)LGAYASQDANEQGQDLGKR;DVSLGDWEFGKRDS(1)LGAYASQDANEQGQDLGKR 127.95 3.9072000000000004e-30 95673000.0 3399.2 3292.8 3571.3999999999996 3747.3 3714.4 4699.7 3346.8999999999996 3381.4 4396.3 4337.3 4553.1 True False 3744.2842816412176 3570.2958120826033 3813.77668057284 3978.7622102642217 3453.5133579843564 4661.427201380567 3474.268110993954 3313.9553243430164 4211.538799545068 4063.4421377917497 3993.0975644789355 0.937689155143349 0.8941168489952727 0.9550922858731865 0.9964099664525516 0.8648707681739326 1.1673712265001575 0.8700684255500568 0.8299209500470742 1.0547047076959257 1.0176165425905375 1.0 11.963292606838495 -8.851913998176705 22.90455050165749 1.0258333204906604 0.9430572451939495 0.15993179119520395 0.08609866591679576 13.242879688251838 3345.668254426247 0.014516948369646395 0.015454397309622999 1.4063259863933992e-09 8.851913998176705 -0.08277607529671094 DVSS(ph)PDENNGQSK ddPTM_A549_MK2206_60min_R1 2 DVSSPDENNGQSK 13 0 J3QL74;J3QLI2;O43829 J3QL74 ZBTB14 Zinc finger and BTB domain-containing protein 14 1 DVS(0.016)S(0.984)PDENNGQSK;DVS(0.012)S(0.988)PDENNGQSK 172.09 9.749600000000001e-22 10402000.0 2035.31 2228.5699999999997 2135.1800000000003 2245.5 2935.8999999999996 2580.3 1741.52 1854.2 2852.3 3201.5 3258.1000000000004 True False 2378.8205694480152 2341.9946940079076 2437.9806304610393 2795.647600804324 2504.0329991632134 2853.34563333548 2057.931641399988 2117.038528249348 2206.258604187146 2478.278926461684 2449.023851014488 0.9713341780900208 0.9562972173740796 0.9954907664337878 1.1415354732646845 1.022461662889048 1.1650950774340172 0.8403069004605679 0.8644417764132358 0.9008726490243127 1.0119456065873256 1.0 11.257991109022436 -7.7716359083476325 24.999731552759627 0.9362362719930852 1.0396558396492601 0.36429661493825183 0.07709640684047432 210.502988263127 516108.04453926976 0.012747594411322486 0.017719930369086936 1.6918587104139675e-08 7.7716359083476325 0.10341956765617488 DVT(ph)GSPPAK ddPTM_A549_MK2206_60min_R1 1 DVTGSPPAK 9 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 DVT(0.665)GS(0.335)PPAK 91.31299999999999 0.0010988 40409000.0 13664.0 17709.0 14466.0 13427.0 19633.0 13777.0 12313.0 12746.0 22186.0 19397.0 22866.0 True False 15970.149147273723 18610.312458745313 16517.496323611776 16716.615602760936 16745.01170767784 15234.872995567535 14550.112717946418 14552.784532987915 17160.90642376188 15015.204228198441 17187.741130504677 0.9291592784656281 1.0827666252033472 0.9610044855921552 0.9725894447579507 0.9742415585931136 0.8863801752592605 0.8465401362208664 0.8466955850969701 0.9984387298750287 0.8735996262795445 1.0 14.06909233309407 -4.126042720717436 15.748043246941126 0.971180103177089 0.9611911597269271 0.0 0.07606834043792961 0.0 0.0 0.009954566083004074 0.0 7.480959081281704e-05 4.126042720717436 -0.00998894345016188 DVT(ph)PPPETEVVLIK ddPTM_A549_MK2206_60min_R1 2 DVTPPPETEVVLIK 14 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK 229.48 3.2170999999999995e-47 56267000.0 13059.4 12979.3 13892.5 13319.1 22222.7 18780.4 15636.2 18984.8 25057.0 20125.3 18864.4 True False 15263.507448324528 13639.89093092738 15862.665399956906 16582.280097917115 18953.770268232678 20767.729462579427 18477.095141748876 21675.9535385116 19381.62950780679 15578.980752372117 14179.848849046291 1.0764224365728075 0.9619207564292741 1.1186766212267345 1.1694257304465137 1.3366694151685172 1.4645945583528717 1.3030530394540565 1.5286448938395758 1.3668431669573373 1.0986704384666222 1.0 13.791554533714073 -6.1923482720358685 2.338757367546343 1.2454534823128107 1.022946422241435 0.3127864939106657 0.15003598489165385 0.41433331484355607 4.369197467641574 0.02787688320321066 0.089871576126545 6.421725359241304e-07 6.1923482720358685 -0.22250706007137566 DVT(ph)PPPETEVVLIK ddPTM_A549_PD325901_60min_R1 2 DVTPPPETEVVLIK 14 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DVT(0.999)PPPET(0.001)EVVLIK;DVT(1)PPPETEVVLIK 271.64 6.071e-84 111174000.0 31230.0 33015.0 33776.0 31155.0 39752.0 30042.0 32204.0 31114.0 33575.0 35905.0 39028.0 True False 34400.446609689134 35797.28991615258 36068.24247158771 33079.3735918613 36959.95665695513 29797.34791239335 33429.54084270498 30493.406861539188 32163.9595102076 33637.952172414385 34227.803418875934 1.005043945961136 1.0458541402166377 1.0537702939972133 0.9664474575548925 1.0798226285409969 0.8705597478090201 0.9766779490228481 0.8908958161400068 0.9397027064982449 0.9827668974475804 1.0 15.062881089414637 -7.241401957336716 24.99503319242021 0.9582629747444621 1.028827066858028 0.452522292857533 0.045950269389101864 732.0152765392781 913129.3759461133 0.0069575677445575974 0.012041247128474701 5.735853397248412e-08 7.241401957336716 0.07056409211356585 DVT(ph)SPINER ddPTM_A549_MK2206_60min_R1 2 DVTSPINER 9 0 K7ELU8;F6WF08;Q6ZW76;K7ERF3;D3DUE4;Q6ZW76-2;K7EJY2 K7ELU8 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 DVT(0.5)S(0.5)PINER;DVT(0.5)S(0.5)PINER 164.1 4.3762e-06 106243000.0 3677.7 3825.4 3241.0 2860.4 4176.9 2972.9 3112.0 3633.7 4801.799999999999 4835.3 4713.700000000001 True False 4298.405848867724 4020.096520395521 3700.622534551761 3561.198128408235 3562.4835431059723 3287.4903047486946 3677.4101176195322 4148.788102739536 3714.1999668989342 3743.0023717383037 3543.1581984982054 1.2131566269577339 1.1346082492448317 1.0444418022656448 1.0050914830496915 1.0054542708863403 0.9278418068214178 1.0378904670918252 1.1709293997931087 1.0482738164141885 1.056402836690951 1.0 11.790820166458587 -5.579862743140555 2.156981094747391 1.0257154229412504 1.216429566302085 0.5104334176046127 0.055513342207056816 0.23445932025616578 1.8389803329308516 0.008129368628873283 0.06647942031002269 2.6310994078927793e-06 5.579862743140555 0.1907141433608346 DVTEES(ph)VTEDDKR ddPTM_A549_MK2206_60min_R1 2 DVTEESVTEDDKR 13 1 F8VQD4;Q8TAD7 F8VQD4 C12orf75;OCC1 Overexpressed in colon carcinoma 1 protein 1 DVT(0.012)EES(0.987)VT(0.001)EDDKR;DVT(0.03)EES(0.97)VTEDDKR 118.47 5.7077e-06 8346700.0 2135.4700000000003 2133.62 1990.03 2271.77 2440.1 2067.29 2004.34 2339.9 2657.8 3248.9 2951.3 True False 2495.8851287711236 2242.2121445721477 2272.246177856846 2828.3537519836295 2081.1645223809255 2286.0492556439585 2368.5026334028057 2671.587990643213 2055.8125436344685 2514.971233540955 2218.410758263731 1.1250779953504018 1.0107290258216404 1.024267561538175 1.2749459230883275 0.9381330822655118 1.0304896183577679 1.0676573869739732 1.2042801274251693 0.9267050910100516 1.13368149887144 1.0 11.115310802571202 -8.796103895675442 24.9998899010998 0.9653885014625452 1.0790989672954727 0.0 0.10322239220923683 179.7782936695656 129654.51112610157 0.015261080814252224 0.016247021834881754 1.5991754143012557e-09 8.796103895675442 0.11371046583292754 DVTEES(ph)VTEDDKR ddPTM_A549_PD325901_60min_R1 1 DVTEESVTEDDKR 13 1 F8VQD4;Q8TAD7 F8VQD4 C12orf75;OCC1 Overexpressed in colon carcinoma 1 protein 1 DVT(0.003)EES(0.997)VTEDDKR 100.41 6.3984e-05 5147300.0 1380.8 1661.4 1831.2 1348.7 2005.0 1772.6 1562.3 1878.9 1468.4 1587.7 1888.1 True False 1520.9777995087643 1801.4120086838072 1955.4762439001493 1432.006135880062 1864.1757168744984 1758.1645333036577 1621.7541814233623 1841.4238655314637 1406.6882544985515 1487.4523510414226 1655.875669652034 0.9185338171122369 1.0878908614330665 1.1809318052913196 0.8648029330493056 1.1257944971594616 1.0617732753287683 0.9793936894816251 1.1120544249064428 0.8495132094030666 0.8982874610108837 1.0 10.693378637746763 -8.75823399676556 24.999978299647783 0.9289367943812845 1.0431370959639477 0.25925573011054814 0.09371582241994515 91.23994528235833 711613.4917443407 0.016338233184456912 0.01815325442563006 1.744881761734533e-09 8.75823399676556 0.11420030158266314 DVTEES(ph)VTEDDKRR ddPTM_A549_MK2206_60min_R1 1 DVTEESVTEDDKRR 14 2 F8VQD4;Q8TAD7 F8VQD4 C12orf75;OCC1 Overexpressed in colon carcinoma 1 protein 1 DVTEES(0.986)VT(0.014)EDDKRR 95.34700000000001 1.0345999999999999e-05 123750000.0 381.31 330.61 475.1 451.34 720.07 470.3 468.7 268.32 529.78 765.18 630.5 True False 445.665805865555 347.43663685051575 542.4763240251589 561.9183202614229 614.148656870961 520.0668338401263 553.8567230489309 306.355181695537 409.78567588481764 592.3253065594101 473.92944908524447 0.9403631842793425 0.7330978007826292 1.1446351879424674 1.1856581635642398 1.2958651505120873 1.097350744596973 1.168648042694874 0.6464151621867956 0.864655439065384 1.2498174732603926 1.0 8.888528499888965 DVTGS(ph)PPAK ddPTM_A549_MK2206_60min_R1 1 DVTGSPPAK 9 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 DVT(0.125)GS(0.875)PPAK 96.64 0.00088556 41704000.0 15855.0 21113.0 17998.0 18006.0 21913.0 18122.0 15875.0 16707.0 25803.0 22526.0 30297.0 True False 18530.936382466694 22187.561519085742 20550.38703389774 22417.470808320057 18689.626727975578 20039.658011589974 18759.2820106716 19075.26841304165 19958.661698923996 17437.360955013548 22773.41874533808 0.8137090258466415 0.9742745157060677 0.9023848050088916 0.9843700262574371 0.8206772525886791 0.879958263433428 0.82373587472508 0.837611103820173 0.8764016471180776 0.765689207668178 1.0 14.475063264643456 -10.564875973082824 0.9184327062850172 0.9981897091502322 0.881963112106077 0.0 0.08798367314004778 0.4631202786296885 0.714159166397658 0.03418159569361739 0.01011865737742548 2.72347897504636e-11 10.564875973082824 -0.11622659704415517 DVTGS(ph)PPAK ddPTM_A549_PD325901_60min_R1 2 DVTGSPPAK 9 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 DVT(0.019)GS(0.981)PPAK;DVT(0.01)GS(0.99)PPAK 97.456 0.00086238 124552000.0 28348.0 30436.0 24569.0 25825.0 28455.0 27271.0 25030.8 27983.0 27813.0 30933.0 32475.0 True False 31225.8680913054 33000.94853515131 26236.40008539905 27420.15159716955 26456.418964420864 27048.914017671235 25983.360791379335 27424.85711276116 26644.116332312857 28979.885100941203 28480.780875986355 1.0963838466112275 1.1587094005198482 0.9211966553740224 0.9627598244783002 0.9289218255503543 0.9497251544980495 0.9123120923024717 0.9629250417036319 0.9355121423225412 1.0175242465130465 1.0 14.79770108169888 -5.760320532620253 24.999999519943206 0.9578230681410255 1.1275466653867825 0.8009563585031219 0.03323082729064538 8.624218539949673 192676.77818902142 0.004553687436135492 0.0158611192514055 1.7365187117276799e-06 5.760320532620253 0.16972359724575703 DVTLS(ph)PVK ddPTM_A549_MK2206_60min_R1 1 DVTLSPVK 8 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DVTLS(1)PVK 105.4 0.0019873 4335700.0 2646.5 3317.3 3022.4 2533.5 3944.1 3234.1 2729.5 3434.0 4617.1 4169.0 4220.1 True False 3093.1644992871725 3486.1364006660897 3451.021767488194 3154.2076137331364 3363.9281147176785 3576.330315378164 3225.4148187797255 3920.780016183939 3571.334221993642 3227.2200045037516 3172.13270116517 0.975105643641897 1.0989881978725484 1.0879184739719698 0.9943492000112576 1.060462607217554 1.127421407706092 1.0167969384114934 1.236007565113458 1.125846412630165 1.0173660147692898 1.0 11.631237409836515 -7.0004643802634 24.84801775050965 1.0769320340703763 1.044425194820605 0.08056435051785249 0.07103858629665759 52.15736372279947 2791136.3261834974 0.011248066561179696 0.021073162426562906 9.989312963988989e-08 7.0004643802634 -0.03250683924977138 DVTLS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 DVTLSPVK 8 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DVT(0.001)LS(0.999)PVK;DVT(0.001)LS(0.999)PVK 103.7 0.0021194000000000005 14270300.0 5713.6 6540.9 6547.700000000001 5884.200000000001 7198.6 6316.7 6176.200000000001 6720.5 6275.2 6822.7 7884.0 True False 6293.640465869988 7092.124598290544 6992.066296518681 6247.6536700122015 6692.995169821829 6265.258889495208 6411.238670746318 6586.454355369743 6011.475166595823 6391.913557630737 6914.317980793731 0.9102330097273754 1.025715713102972 1.0112445386429891 0.9035820578930043 0.9679906519216093 0.9061282554401678 0.9272409351949328 0.9525819283500249 0.8694241692809351 0.9244459938617078 1.0 12.75537123751976 -6.256522914646038 24.85953987947036 0.9352883626017119 0.986729549050391 0.21628733295850833 0.042538477602823276 548.9990225724803 2775935.3776554326 0.007354325380205822 0.018783286323945856 5.539583147079309e-07 6.256522914646038 0.05144118644867912 DVTNFTVGGFAPMS(ph)PR ddPTM_A549_MK2206_60min_R1 10 DVTNFTVGGFAPMSPR 16 0 O00267;O00267-2 O00267 SUPT5H Transcription elongation factor SPT5 1 DVTNFTVGGFAPMS(1)PR;DVTNFT(0.009)VGGFAPMS(0.991)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFT(0.001)VGGFAPMS(0.999)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR 135.08 2.4922e-10 223485200.0 12797.59 16536.97 14670.84 14755.179999999998 20517.749999999996 15067.140000000001 14818.23 15582.9 24550.670000000002 21416.540000000005 22620.54 True False 14957.51032096448 17378.631137890185 16751.385715767774 18370.1997623852 17499.61615469906 16661.534754041913 17510.510580724047 17791.823795629793 18989.98244436393 16578.528739567002 17003.23562285605 0.8796861169681335 1.0220778870187226 0.9851881187396042 1.0803943537482745 1.0291932984317271 0.9799037738232119 1.0298340250714464 1.0463787122795445 1.1168452208494517 0.9750219962418124 1.0 14.053521689022507 -4.194567712541143 0.9209893345941199 1.0478237505066759 6.084863666722685e-12 0.43077263593522497 0.04453099753305567 8.163399306100017 1.1693284275425697 0.007478261644438223 13.610342066758358 6.388991163371609e-05 4.194567712541143 -1.047823750500591 DVTNFTVGGFAPMS(ph)PR ddPTM_A549_PD325901_60min_R1 8 DVTNFTVGGFAPMSPR 16 0 O00267;O00267-2 O00267 SUPT5H Transcription elongation factor SPT5 1 DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFT(0.001)VGGFAPMS(0.999)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR 153.72 7.1738e-16 437782700.0 14818.59 15358.83 16792.45 16455.809999999998 18109.059999999998 18950.06 16662.69 17850.190000000002 17752.47 18036.35 19492.75 True False 16322.962347930614 16653.17250591857 17932.086638205034 17472.248009843912 16837.142098465476 18795.73699423237 17296.797786123832 17494.15395724685 17006.395421777364 16897.53178289726 17095.2653247231 0.954823574707812 0.9741394584753723 1.0489504724019536 1.022051876818526 0.9849008938232549 1.099470329194017 1.011788788156992 1.0233332811715348 0.9948014902806328 0.9884334324112607 1.0 14.061309193645224 -5.5400298289736005 23.206373962533885 1.0103637022849807 0.9596525216920603 0.27961384444377413 0.03196302253519839 88.76697660274324 120107.02962815821 0.004375812830509369 0.0169596919428663 2.883833423830484e-06 5.5400298289736005 -0.05071118059292046 DVTS(ph)PINER ddPTM_A549_PD325901_60min_R1 2 DVTSPINER 9 0 K7ELU8;F6WF08;Q6ZW76;K7ERF3;D3DUE4;Q6ZW76-2;K7EJY2 K7ELU8 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 DVT(0.018)S(0.982)PINER;DVT(0.025)S(0.975)PINER 195.8 3.3695e-16 153251000.0 4067.2 4095.8 4386.9 4769.4 5056.4 3890.0 4046.2 4231.7 4141.8 4823.6 4281.6 True False 4480.099149885611 4440.967440211348 4684.621414572716 5063.995005906699 4701.255907633024 3858.32112972539 4200.180355165596 4147.295423795571 3967.73454949748 4519.037072799272 3754.9903432986366 1.193105371863617 1.182684117453709 1.2475721603207717 1.3486040023895625 1.2520021299184285 1.0275182562349763 1.118559562386484 1.1044756562948461 1.056656392360241 1.2034750184815244 1.0 11.874593482230374 -7.259866100497301 24.966991646532463 1.0415523044926356 1.2472646531909646 0.5108374743021276 0.07113124282071875 53.42690394547917 847851.3792196794 0.008794548168402909 0.014724408743523766 5.497103316733801e-08 7.259866100497301 0.205712348698329 DVTS(ph)PINERDVESSSSSSSR ddPTM_A549_PD325901_60min_R1 1 DVTSPINERDVESSSSSSSR 20 1 K7ELU8;F6WF08;Q6ZW76;K7ERF3;D3DUE4;Q6ZW76-2;K7EJY2 K7ELU8 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 DVT(0.246)S(0.754)PINERDVESSSSSSSR 80.031 6.0375e-05 8882000.0 985.06 909.24 792.1 964.09 1078.9 1057.1 889.39 1359.2 1126.9 1241.4 1137.3 True False 1085.0625660371547 985.8648457780575 845.8566692842442 1023.6396496927476 1003.1217860029409 1048.4913280803873 923.2362231428825 1332.0896897282273 1079.5403119003122 1163.0177921413504 997.4193099387 1.0878700213893404 0.9884156401971478 0.8480452111321459 1.0262881814025226 1.0057172304640776 1.051204160209036 0.9256249743145872 1.3355362949711647 1.0823334791529744 1.1660269462928563 1.0 9.962056323480713 -7.274355183166875 1.4401828865037762 1.0585397743448126 0.9794175243891918 0.1363641323669872 0.11293381616906882 0.8008670629356942 3.250876530933477 0.01765884888118943 0.03477813888258854 5.316732580373707e-08 7.274355183166875 -0.07912224995562078 DVTVLS(ph)VAEEQDLLKQER ddPTM_A549_PD325901_60min_R1 2 DVTVLSVAEEQDLLKQER 18 1 Q14966-3;Q14966;Q14966-5;A0A096LPK8 Q14966-3 ZNF638 Zinc finger protein 638 1 DVT(0.012)VLS(0.988)VAEEQDLLKQER;DVT(0.001)VLS(0.999)VAEEQDLLKQER 131.82 3.9476e-13 22478600.0 3756.5 3690.6 3239.0 3903.7000000000003 4793.6 4281.7 3968.4 4410.7 4569.1 3893.8999999999996 4749.1 True False 4137.857114610862 4001.6198141618274 3458.8180176892624 4144.822683054049 4456.91407302224 4246.831254793109 4119.419633591802 4322.7251283727865 4377.076616473255 3648.0384894628687 4164.990807025305 0.9934852935644718 0.9607751852446081 0.8304503366142119 0.9951577026443281 1.0700897743890654 1.0196496106617474 0.9890585176426715 1.0378714692674527 1.0509210750454032 0.8758815225497099 1.0 12.02409759593751 -6.5091499275918565 24.927958642457032 1.0255261973392895 0.9283762991132843 0.19658579113441899 0.06184373448197918 379.40791545801187 688905.4011498078 0.005944208747843012 0.013304783190333258 3.096350189461076e-07 6.5091499275918565 -0.09714989822600517 DVVGNDVATILS(ph)R ddPTM_A549_MK2206_60min_R1 1 DVVGNDVATILSR 13 0 Q9Y6W5 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 1 DVVGNDVAT(0.006)ILS(0.994)R 61.409 0.007591 1063500.0 674.8 1081.2 937.21 495.51 1145.8 799.7 526.62 870.63 1400.1 1285.7 1311.3 True False 788.6897427239685 1136.228461821414 1070.1204707211527 616.9099722442895 977.2543378320822 884.3237232021021 622.3000373203078 994.0444686925516 1082.9795855002699 995.2594770425701 985.6680199611123 0.8001575852639358 1.1527496467484475 1.085680420841261 0.6258800729566416 0.9914639797998498 0.8971821194290055 0.6313485115859389 1.008498245415094 1.0987265119375555 1.0097309204389489 1.0 9.944958008180208 -8.50327293337581 24.73219113617939 1.0469888434564705 0.890935359138823 0.16705057392507627 0.1563127740967955 876.8081517730161 1106071.2016505671 0.02562214924113263 0.030742446937751113 3.1385356539393617e-09 8.50327293337581 -0.15605348431764743 DVVGNDVATILS(ph)RR ddPTM_A549_MK2206_60min_R1 2 DVVGNDVATILSRR 14 1 Q9Y6W5 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 1 DVVGNDVAT(0.003)ILS(0.997)RR;DVVGNDVAT(0.002)ILS(0.998)RR 113.29 2.2378e-06 9735900.0 687.17 842.77 597.69 505.71000000000004 938.86 592.6800000000001 677.98 528.11 1111.62 897.0 1089.1399999999999 True False 803.1474963065045 885.6633932382844 682.4514293971738 629.6089727021846 800.7549377003216 655.3970042108564 801.1601900847334 602.9712097690448 859.8398448923721 694.3670770064439 818.6764792651917 0.9810315999640966 1.0818234255773627 0.8336033178939164 0.7690571167591063 0.9781091285522755 0.8005567776896585 0.9786041377465978 0.736519522718236 1.0502803814079609 0.8481580875875138 1.0 9.677149636793636 DVVGNDVATILS(ph)RR ddPTM_A549_PD325901_60min_R1 2 DVVGNDVATILSRR 14 1 Q9Y6W5 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 1 DVVGNDVATILS(1)RR;DVVGNDVAT(0.001)ILS(0.999)RR 139.08 5.9096e-10 16407400.0 1003.7900000000001 1134.28 1076.35 1048.23 1156.79 1084.53 1178.65 1293.0900000000001 1529.06 1608.47 1412.51 True False 1105.6940218488578 1229.8697563560063 1149.3975836183508 1112.9767863969437 1075.5410611088537 1075.6979472547755 1223.5041707320281 1267.2983055405193 1464.7989256493834 1506.9109296967927 1238.780224638629 0.8925667360983305 0.9928070628628075 0.9278462480732993 0.8984457164075378 0.8682258884319899 0.8683525340974609 0.9876684712891205 1.0230210979596557 1.1824526227617875 1.2164473566216165 1.0 10.274704542400233 -8.18999628725569 2.4290005637010887 1.0856471889890467 0.9118039503746177 0.6573863288083892 0.06622079760940475 0.17033418763288646 1.9722428241502492 0.01232609913176239 0.016121215969727872 6.456597486979517e-09 8.18999628725569 -0.17384323861442896 DVVICPDASLEDAKK ddPTM_A549_PD325901_60min_R1 1 DVVICPDASLEDAKK 15 1 Q99497;K7ELW0;K7EN27 Q99497 PARK7 Protein deglycase DJ-1 0 110.55 2.7117000000000002e-06 4674400.0 3209.6 3458.3 2619.1 2517.3 3200.1 3545.7 3188.0 2588.3 2691.6 3342.8 3528.8 False True 3535.436229217361 3749.743077904907 2796.84787592774 2672.7879037969014 2975.3360157456773 3516.8249947730887 3309.3210845405383 2536.6743260179314 2578.481412291133 3131.7350375141823 3094.7799709062574 1.1423869426756257 1.2116347892761028 0.9037307667170689 0.8636439194138308 0.9614047020197035 1.136373192225114 1.0693235434024915 0.8196622538160948 0.833171158056857 1.0119410966063294 1.0 11.59562112668113 -8.243463873662932 24.63710442793883 0.911401687427537 1.0362415777599128 0.22188364141487893 0.11224728503079658 889.5460210544778 1219206.7348623795 0.01991950445158246 0.025686841410412442 5.708685613073745e-09 8.243463873662932 0.12483989033237575 DVVLST(ph)SPK ddPTM_A549_MK2206_60min_R1 2 DVVLSTSPK 9 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 DVVLS(0.001)T(0.993)S(0.006)PK;DVVLS(0.015)T(0.953)S(0.032)PK 173.64 1.3323e-07 109096000.0 14880.7 17798.4 17207.0 15455.9 22791.4 16726.2 16094.0 16086.1 24161.9 23045.4 22842.9 True False 17392.19836181471 18704.262536887036 19647.21133971988 19242.596193841706 19438.81525158503 18496.155382047018 19018.071475889687 18366.353936615153 18689.2682286258 17839.4281342746 17170.377498032252 1.0129188111215306 1.0893332158265343 1.1442504011325014 1.1206856806757413 1.132113446766837 1.0772130888890883 1.1076093975260115 1.069653473764334 1.0884599497458698 1.0389654005172002 1.0 14.067634137500576 -10.559592142993063 0.5013150320854586 0.9837460206660882 1.1004162849367525 0.3828951185687447 0.03522590411261338 0.8532201253081084 0.31273319323796667 0.04763265951967406 0.00841723639224177 2.756816484583268e-11 10.559592142993063 0.11667026427066429 DVVLST(ph)SPK ddPTM_A549_PD325901_60min_R1 2 DVVLSTSPK 9 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 DVVLS(0.005)T(0.991)S(0.005)PK;DVVLS(0.005)T(0.97)S(0.024)PK 166.66 1.2191e-06 182579000.0 10237.0 10258.5 11158.599999999999 9858.9 12452.400000000001 11452.8 11325.2 11193.7 10847.4 11020.0 12150.8 True False 11276.252703918903 11123.019797208886 11915.889698112813 10467.861861813553 11577.786382447875 11359.532193963738 11756.186683387234 10970.432872212228 10391.521500849618 10324.195319315033 10656.32863026744 1.0581742638727072 1.0437947423670748 1.1181984069323658 0.9823140994433505 1.086470470661274 1.0659892903170207 1.103211724345272 1.0294758403989748 0.9751502474627439 0.9688322946414171 1.0 13.379422858995667 -8.550559599733019 4.885763513482655 0.9885552942860621 1.0645374238788419 0.5352676471746682 0.03414305498337087 0.10679506882289143 6.484053604854719 0.005376577558897383 0.006190669579418632 2.814753710245245e-09 8.550559599733019 0.07598212959277972 DVWS(ph)APSSLR ddPTM_A549_PD325901_60min_R1 2 DVWSAPSSLR 10 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 DVWS(0.997)APS(0.003)SLR;DVWS(0.698)APS(0.243)S(0.059)LR 116.55 8.008e-05 11136300.0 2010.2600000000002 2336.3 1829.7 2258.7 1830.96 2142.4 1597.02 1446.9699999999998 2307.5 2204.6000000000004 2350.4 True False 2214.3401153248055 2533.188200245565 1953.874444879915 2398.214769120113 1702.3596860690925 2124.9530047104554 1657.7954700228765 1418.1090482239938 2210.5237995474045 2065.4011797606113 2061.3157004131886 1.0742362826232505 1.2289181127072335 0.9478773409081699 1.163438850555203 0.8258607285278312 1.0308721775536425 0.8042414219668405 0.6879630557996212 1.0723848846172894 1.0019819765340185 1.0 11.009349762145192 -6.728817471616659 24.99978933271534 0.9783232947905477 1.1014433617888288 0.24205708288090988 0.13311413313861237 305.320988324762 233981.30359077686 0.020422547231824205 0.04251051758822892 1.8671642710698153e-07 6.728817471616659 0.12312006699828115 DVWSAPS(ph)SLRLPR ddPTM_A549_PD325901_60min_R1 1 DVWSAPSSLRLPR 13 1 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 DVWS(0.002)APS(0.499)S(0.499)LRLPR 45.614 0.012971000000000002 1710400.0 444.87 592.52 444.24 710.57 745.7 462.5 480.6 604.65 532.85 856.03 903.6 True False 490.03287490401516 642.4537398491206 474.3887978321332 754.4602950784428 693.3246045253431 458.73355334138625 498.8894959944108 592.5897814112515 510.456167535789 801.9801197090057 792.462928392341 0.6183669384991148 0.8107051028272804 0.5986258547065658 0.9520449071466426 0.8748984711901685 0.5788706788745474 0.6295430084111332 0.7477823380500971 0.644138860314065 1.0120096360040112 1.0 9.630199636981997 -10.838482936389514 1.0291106783308586 1.003722856087228 0.717481037497348 0.47890952117692076 0.11562638982180255 0.4068496058744701 0.7484682925916218 0.08617764078664635 0.020063630040765567 1.4504977638447138e-11 10.838482936389514 -0.28624181858987996 DVWSAPSS(ph)LR ddPTM_A549_MK2206_60min_R1 1 DVWSAPSSLR 10 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 DVWS(0.108)APS(0.318)S(0.573)LR 73.499 0.0016817999999999998 2705200.0 1162.2 1002.4 721.49 573.27 1638.8 1081.4 885.04 969.44 1408.7 1512.7 1322.9 True False 1358.3509469380501 1053.4178784034273 823.8081309638224 713.7211757350681 1397.7346909052326 1195.8330302247762 1045.8403118566805 1106.8610887854857 1089.6316992316479 1170.9800193842223 994.3874198173992 1.3660178315484786 1.0593636417854804 0.8284579174534403 0.717749602932557 1.4056238675685384 1.2025826216147915 1.0517433054902583 1.1131084994908123 1.0957818627992484 1.1775893339431538 1.0 9.957664234473794 -5.263606402193358 6.9688222095647125 1.0495143506001208 1.37058483102103 0.1928800029763048 0.17431623383519448 0.12317559077907687 45.2784350188737 0.023057515140623045 0.18810059894627873 5.449963551670053e-06 5.263606402193358 0.32107048042090924 DVYKEHFQDDVFNEK ddPTM_A549_PD325901_60min_R1 1 DVYKEHFQDDVFNEK 15 1 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 110.77 9.178e-06 7267200.0 832.92 1111.8 1114.5 988.43 1436.3 1174.4 901.48 1273.4 1390.9 1432.8 1282.3 False True 917.4774252367043 1205.49528786244 1190.1366720329381 1049.4830762125973 1335.419242966005 1164.8360757710784 935.7863147087846 1248.0010380370247 1332.4453099850414 1342.3327634768218 1124.5852291694323 0.8158362758457282 1.0719465778087482 1.0582894396647191 0.9332179091376631 1.1874771323044009 1.0357917261916854 0.8321168466705845 1.1097434019818504 1.184832661344063 1.1936247504052744 1.0 10.135177287743646 DVYLS(ph)PR ddPTM_A549_MK2206_60min_R1 6 DVYLSPR 7 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DVYLS(1)PR;DVY(0.003)LS(0.997)PR;DVYLS(1)PR;DVY(0.001)LS(0.999)PR;DVYLS(1)PR;DVYLS(1)PR 133.86 0.0056122 2959328300.0 10663.27 11642.64 9011.73 9034.71 18508.58 15303.029999999999 13674.189999999999 15347.73 19056.7 14795.509999999998 14444.079999999998 True False 12462.969284078565 12235.200646263838 10289.728822368439 11248.214355583541 15785.992400167663 16922.386477270815 16158.613321417664 17523.317727951875 14740.387877296618 11453.19401507203 10857.216299672 1.1478973007524107 1.126918752335575 0.9477317701296322 1.0360127352278459 1.453963148974435 1.5586303164819555 1.4882832648278197 1.613978873063555 1.3576581206862324 1.054892312997212 1.0 13.406366635044115 -6.731409464668383 24.973110552083646 1.277755899039738 1.0607378700554861 0.29126613411249436 0.19676161020317448 317.67159318124897 264176.71226705576 0.035480135315283066 0.07384986885557385 1.8560536919053124e-07 6.731409464668383 -0.21701802898425182 DVYLS(ph)PR ddPTM_A549_PD325901_60min_R1 8 DVYLSPR 7 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR 109.71 0.008599200000000001 3643039800.0 23162.090000000004 24533.8 22305.6 23061.399999999998 25000.93 21585.19 21801.609999999997 21692.01 25518.099999999995 24812.05 26876.279999999995 True False 25513.488325770544 26601.34942737859 23819.392150469183 24485.85030176054 23244.950925326248 21409.407369186945 22631.28219884874 21259.345843497365 24445.662998583146 23245.41292854905 23570.66794277611 1.082425342706076 1.1285785151256742 1.0105522765963577 1.0388271711775956 0.986181256371664 0.9083071986404381 0.9601459854167914 0.901940746656392 1.0371222002673541 0.986200857140888 1.0 14.524705021636759 -5.826845442615516 5.72440123280866 0.997646143653076 1.1052580100279907 0.4967228904308518 0.0459601225937303 0.13713116724317634 8.36183773447199 0.007120959404493745 0.023247541890548697 1.4898912081354831e-06 5.826845442615516 0.10761186637491471 DVYLS(ph)PRDDGYS(ph)TKDSYSSR ddPTM_A549_PD325901_60min_R1 1 DVYLSPRDDGYSTKDSYSSR 20 2 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 2 DVY(0.007)LS(0.944)PRDDGY(0.013)S(0.266)T(0.241)KDS(0.165)Y(0.006)S(0.173)S(0.186)R 45.638999999999996 0.024229 8679900.0 3476.1 3481.1 2670.4 3118.0 3837.6 4321.6 3581.5 3229.4 4214.6 4396.7 4312.7 True False 3828.9911130304326 3774.4645139215104 2851.629402419702 3310.5917785082183 3568.060215001281 4286.406322421914 3717.795942372002 3164.987083584709 4037.4750186662995 4119.091611654484 3782.2652404577775 1.0123539386061142 0.9979375516944647 0.7539474947226498 0.8752933937831204 0.9433659429367331 1.1332907794438867 0.9829548447855623 0.8367967031317038 1.0674753783734197 1.0890541381375833 1.0 11.885034823961197 -7.012804529977321 23.70275371189385 1.0194018437319272 0.9055713194856878 0.22659863950360004 0.09487946171895842 343.1133127197087 635148.1956612886 0.013847198294740203 0.024770016211248583 9.709468788609328e-08 7.012804529977321 -0.1138305242462394 DVYLS(ph)PRDDGYSTK ddPTM_A549_MK2206_60min_R1 7 DVYLSPRDDGYSTK 14 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DVYLS(0.985)PRDDGY(0.007)S(0.004)T(0.004)K;DVYLS(1)PRDDGYSTK;DVYLS(0.998)PRDDGYS(0.002)TK;DVYLS(0.994)PRDDGY(0.005)S(0.001)TK;DVYLS(1)PRDDGYSTK;DVYLS(0.998)PRDDGYS(0.002)TK;DVYLS(1)PRDDGYSTK 246.75 2.5605e-58 4876317100.0 74115.5 85836.50000000001 78250.5 74614.5 88378.8 69622.8 66298.6 60122.1 103865.3 127343.2 125859.9 True False 86624.38444999748 90205.21121266553 89347.59754395009 92895.05584957206 75378.39559468845 76990.23848412574 78344.19743702136 68644.59179120926 80339.97538880164 98576.28267630635 94605.41327347187 0.9156387721661976 0.9534888976375288 0.9444237327696753 0.9819211463200763 0.7967661995915107 0.8138037330017608 0.8281153765541417 0.7255884141933954 0.8492111879112696 1.0419729618574367 1.0 16.529635115750008 -2.7588040223695494 11.250329870081977 0.9001345249878993 1.0773506278002842 0.0 0.09449060392109042 0.0 0.0 0.013014003596326026 0.0 0.0017425930501189487 2.7588040223695494 0.17721610281238498 DVYLS(ph)PRDDGYSTK ddPTM_A549_PD325901_60min_R1 14 DVYLSPRDDGYSTK 14 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DVYLS(0.99)PRDDGY(0.006)S(0.004)T(0.001)K;DVYLS(1)PRDDGYSTK;DVYLS(0.977)PRDDGYS(0.022)T(0.002)K;DVYLS(0.998)PRDDGY(0.001)S(0.001)TK;DVYLS(1)PRDDGYSTK;DVYLS(1)PRDDGYSTK;DVYLS(1)PRDDGYSTK;DVYLS(1)PRDDGYSTK;DVY(0.004)LS(0.993)PRDDGY(0.001)S(0.001)T(0.001)K;DVYLS(1)PRDDGYSTK;DVYLS(1)PRDDGYSTK;DVY(0.004)LS(0.996)PRDDGYSTK;DVYLS(1)PRDDGYSTK;DVY(0.003)LS(0.997)PRDDGYSTK 230.97 1.794e-47 9282120700.0 190955.80000000002 201548.50000000003 205402.7 211971.89999999997 229586.80000000008 252590.8 224335.60000000003 231388.7 253670.2 243471.90000000002 264744.30000000005 True False 210341.4922417698 218533.69942952247 219342.5624087755 225064.9228398862 213461.4151994624 250533.78427101282 232872.81401915033 226773.47085757618 243009.32365588256 228099.04268282562 232182.429452391 0.9059319981183173 0.9412154913915776 0.9446992303685567 0.9693451970965604 0.9193693756367239 1.0790385166608172 1.002973457416169 0.9767038418558545 1.046630979911043 0.9824130241931047 1.0 17.824899273939923 -7.243481715974358 24.982092844741576 1.020732967398076 0.938719096297054 0.6084806844089032 0.031118312886900507 400.9035223392065 557723.4272589663 0.0044352087535397345 0.007672577689618842 5.7084510854467263e-08 7.243481715974358 -0.0820138711010221 DVYLS(ph)PRDDGYSTKDSYSS(ph)R ddPTM_A549_PD325901_60min_R1 1 DVYLSPRDDGYSTKDSYSSR 20 2 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 2 DVYLS(1)PRDDGYS(0.058)T(0.063)KDS(0.246)YS(0.3)S(0.333)R 67.33 0.0011347999999999998 9538000.0 3301.0 3528.6 3368.5 3516.8 3476.3 3912.8 3917.5 3482.3 3506.2 3195.0 4080.6 True False 3636.1150899322374 3825.967505622778 3597.106666436025 3734.0247487677016 3232.1366805839475 3880.935454084707 4066.5826062382525 3412.842794688497 3358.8466071389407 2993.267154737889 3578.7120690546567 1.0160401339280543 1.0690906202558608 1.0051400048471146 1.0433990432077627 0.9031563920809478 1.084450321567749 1.1363257305336862 0.9536511261130949 0.9385629640850668 0.8364090479982601 1.0 11.805224758772011 DVYLSPRDDGY(ph)STK ddPTM_A549_PD325901_60min_R1 1 DVYLSPRDDGYSTK 14 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DVY(0.002)LS(0.257)PRDDGY(0.482)S(0.109)T(0.15)K 52.265 0.01864 3394400.0 1966.1 2316.6 2109.8 2030.4 2467.0 2112.6 2253.4 2315.6 2691.1 2398.7 2285.9 True False 2165.697024633679 2511.8280121084067 2252.9837152580453 2155.813196627032 2293.7264306879724 2095.395686030297 2339.154370107795 2269.4135414469406 2578.002425552336 2247.245672635298 2004.7487915140023 1.0802834917776045 1.2529390329306318 1.123823455983517 1.0753532840386175 1.1441465586098356 1.0452160863745115 1.166806724118909 1.1320189098271316 1.2859478636250519 1.1209612307276464 1.0 10.969205753291067 -11.151324612138954 1.548533832473295 1.0003916030791562 1.1634682149337618 0.045059934940759105 0.07832009341319825 0.3495935590073389 1.5090167952123432 0.05746974763849689 0.012385064154951149 7.057898165275956e-12 11.151324612138954 0.16307661185460565 DVYVTT(ph)HTPR ddPTM_A549_MK2206_60min_R1 1 DVYVTTHTPR 10 0 H0YAI5;D6RA71;P78317 H0YAI5 RNF4 E3 ubiquitin-protein ligase RNF4 1 DVYVT(0.05)T(0.605)HT(0.344)PR 96.64 9.231299999999999e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DWEDDS(ph)DEDMSNFDR ddPTM_A549_MK2206_60min_R1 18 DWEDDSDEDMSNFDR 15 0 B4DDC6;A0A087WYT3;Q15185-4;Q15185;Q15185-2 B4DDC6 PTGES3 Prostaglandin E synthase 3 1 DWEDDS(1)DEDMSNFDR;DWEDDS(0.891)DEDMS(0.109)NFDR;DWEDDS(0.954)DEDMS(0.046)NFDR;DWEDDS(0.905)DEDMS(0.095)NFDR;DWEDDS(0.968)DEDMS(0.032)NFDR;DWEDDS(0.999)DEDMS(0.001)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.619)DEDMS(0.381)NFDR;DWEDDS(0.826)DEDMS(0.174)NFDR;DWEDDS(0.989)DEDMS(0.011)NFDR;DWEDDS(0.999)DEDMS(0.001)NFDR;DWEDDS(0.95)DEDMS(0.05)NFDR;DWEDDS(0.973)DEDMS(0.027)NFDR;DWEDDS(0.997)DEDMS(0.003)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.998)DEDMS(0.002)NFDR;DWEDDS(1)DEDMSNFDR 436.89 0.0 2151501200.0 87794.48000000001 79029.76999999999 51381.770000000004 48714.2 196029.74 134569.31 107839.99 133347.01 196995.11 108370.76999999999 106524.1 True False 102612.04185504532 83052.04772955998 58668.47760788509 60649.181186863534 167194.02492502643 148809.34506432153 127433.1202795595 152249.3570255912 152376.03212154852 83889.73779023155 80071.22605440355 1.2815095623155146 1.0372271266725845 0.7327036252451462 0.7574403961999544 2.0880662525565454 1.8584621767027094 1.591497052798672 1.901424076136251 1.903006106313624 1.047688938011684 1.0 16.28899627653437 -6.739198427369391 24.996926614521303 1.5562278027586827 0.9426122405016581 0.4479814959058277 0.3548383979272008 227.25114025512806 255409.52307337814 0.06140000761749377 0.12773651748869225 1.8230625621897614e-07 6.739198427369391 -0.6136155622570245 DWEDDS(ph)DEDMSNFDR ddPTM_A549_PD325901_60min_R1 14 DWEDDSDEDMSNFDR 15 0 B4DDC6;A0A087WYT3;Q15185-4;Q15185;Q15185-2 B4DDC6 PTGES3 Prostaglandin E synthase 3 1 DWEDDS(0.939)DEDMS(0.061)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.94)DEDMS(0.06)NFDR;DWEDDS(0.842)DEDMS(0.158)NFDR;DWEDDS(0.918)DEDMS(0.082)NFDR;DWEDDS(0.982)DEDMS(0.018)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.869)DEDMS(0.131)NFDR;DWEDDS(0.773)DEDMS(0.227)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR 495.4 0.0 2283640500.0 114880.04000000001 103978.03 96837.97 90926.55 96414.38 74209.32999999999 76078.77 66762.04000000001 111860.62000000001 117251.41 131127.2 True False 126542.57709058448 112740.62349902808 103409.9769782193 96542.87648432204 89642.56656035417 73604.99382050498 78973.98922425054 65430.418738392895 107159.50714718456 109848.1359623493 114999.38568380721 1.1003761136473849 0.9803584847749567 0.8992219946508829 0.8395077583263648 0.7795047428064351 0.6400468435795229 0.6867340095310673 0.5689632022756622 0.9318267789866415 0.9552062848785875 1.0 16.811266628882183 -5.465716837729219 1.9880025229594809 0.874842293689243 1.1200752804580973 0.20584589173054213 0.14143407875352346 0.8034012888453839 4.55238954436953 0.02469331774335672 0.30601077998147375 3.4220248760197097e-06 5.465716837729219 0.2452329867688543 DWEDDSDEDMS(ph)NFDR ddPTM_A549_PD325901_60min_R1 1 DWEDDSDEDMSNFDR 15 0 B4DDC6;A0A087WYT3;Q15185-4;Q15185;Q15185-2 B4DDC6 PTGES3 Prostaglandin E synthase 3 1 DWEDDS(0.012)DEDMS(0.988)NFDR 115.78 3.5211e-07 6353300.0 1869.4 2239.2 1613.8 2001.5 1875.4 2052.6 1406.4 1068.5 2383.9 2022.7 2608.2 True False 2059.1801118204567 2427.905242473082 1723.322172567747 2125.1281092636946 1743.6783737787694 2035.8843061373616 1459.921321611609 1047.1879292779656 2283.7129732355606 1894.9863768038595 2287.4079347420343 0.9002242584476667 1.061422060139392 0.7533952061603288 0.9290551444656762 0.7622944501044652 0.8900398897877223 0.6382426586171014 0.4578054982554145 0.9983846512682093 0.8284426874726083 1.0 11.159497962588153 -8.919056513940248 24.999947116961536 0.9993390459741142 0.8021270506060572 0.11110264825783289 0.15933955495817667 29.844794239621024 9215.69756818485 0.02688372073933285 0.028619840796036803 1.204879141468725e-09 8.919056513940248 -0.197211995368057 DWEDDSDEDMSNFDR ddPTM_A549_MK2206_60min_R1 1 DWEDDSDEDMSNFDR 15 0 B4DDC6;A0A087WYT3;Q15185-4;Q15185;Q15185-2 B4DDC6 PTGES3 Prostaglandin E synthase 3 0 58.37 0.005238800000000001 937160.0 363.51 437.71 154.27 314.01 729.84 338.47 422.56 721.18 703.93 567.58 733.89 False True 424.8616010337728 459.9875693894293 176.14780574060472 390.9424640964447 622.4815028132017 374.28667074179776 499.3336822947651 823.4094735211213 544.490978945222 439.3632837985704 551.6448586664076 0.7701723207588098 0.8338472880929984 0.31931378127304433 0.7086850497284461 1.1284098692010665 0.6784920857354307 0.9051723666960226 1.4926441542692888 0.9870317295470132 0.796460398200255 1.0 9.107595968497813 -6.657354159580959 5.945049480957484 1.0084010458332977 0.6382446920911368 0.34102067844196227 0.22812574156941456 0.16774777293734114 8.342405018626424 0.030619444246012067 0.06422409020048266 2.2011307472031982e-07 6.657354159580959 -0.37015635374216094 DWS(ph)HYFK ddPTM_A549_PD325901_60min_R1 1 DWSHYFK 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 DWS(0.998)HY(0.002)FK 60.973 0.008724700000000002 3662100.0 935.29 892.19 482.88 760.58 692.76 729.87 650.87 543.62 1029.0 1071.0 1195.0 True False 1030.2399522758933 967.3779824410778 515.6511405933289 807.559299197492 644.102927492258 723.9261807076274 675.6392140197302 532.7770726383602 985.7547084438911 1003.3768772219971 1048.0225757291364 0.983032213365374 0.923050709826597 0.4920229320771808 0.7705552512889831 0.6145887907463624 0.690754376358709 0.644680018986872 0.5083641182707285 0.9405853759954322 0.9574000603220993 1.0 10.033454079344386 -8.895953978954298 8.183251716904563 0.9738888964931032 0.7007749464883901 0.4006391488897616 0.14342126454982868 0.17064049764264597 12.173369059270543 0.025068796356722413 0.026629257179341604 1.2707087517436306e-09 8.895953978954298 -0.27311395000471306 DWS(ph)IIR ddPTM_A549_PD325901_60min_R1 1 DWSIIR 6 0 A0A087X2H1;Q9ULT8;H0YJP0;G3V4V5 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 DWS(1)IIR 63.48 0.059868 1104700.0 802.55 568.75 548.74 379.72 458.2 730.24 447.87 586.61 541.52 480.81 598.93 True False 884.0242851939162 616.6805585282989 585.9807962416817 403.1744419933101 426.0176127041871 724.2931675503006 464.91393793386766 574.9096033633574 518.7617975865262 450.4515745444521 525.265406930085 1.683004960026967 1.174036116584357 1.1155899256081758 0.7675632864339271 0.8110521025819084 1.3789089439250033 0.8851029056930636 1.0945125945441907 0.9876184320197876 0.8575694660288358 1.0 9.036902763999349 -5.196502019419684 1.7507078100790903 0.996732136215069 1.9907501544210364 0.6123355381903006 0.16085707076311018 0.5011123081181147 1.3198622997081864 0.020328219799408034 0.8682266400799877 6.360598472248205e-06 5.196502019419684 0.9940180182059675 DWSHY(ph)FK ddPTM_A549_PD325901_60min_R1 1 DWSHYFK 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 DWS(0.067)HY(0.933)FK 44.721000000000004 0.032105 3566100.0 1139.3 906.3 867.94 824.51 816.4 894.97 649.54 782.07 1190.5 1251.7 1283.6 True False 1254.9608972916692 982.6770816601264 926.843627747212 875.4381101019272 759.0588804271024 887.6816610463576 674.2586001419262 766.4710003279538 1140.4674250752691 1172.6674483835423 1125.7253374108107 1.114802035262085 0.8729279238933203 0.8233301649574396 0.7776658133283659 0.6742842638444578 0.7885419573908161 0.5989548051683136 0.6808685696733552 1.0130956345873547 1.0416994353886528 1.0 10.13663915587072 -8.777698624542124 24.908748724931417 1.0061840837474796 0.784327721917146 0.3861069087212955 0.12691101328332513 174.58458381998014 267458.07888552936 0.02254864797883591 0.024040321115420336 1.668404588007414e-09 8.777698624542124 -0.22185636183033364 DWSHYFK ddPTM_A549_PD325901_60min_R1 1 DWSHYFK 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 125.25 0.0064788 41388000.0 11250.0 10127.0 9719.7 10729.0 10979.0 12270.0 10911.0 9055.8 14869.0 14156.0 15619.0 False True 12392.091718187716 10980.437830709592 10379.337291304217 11391.705962673077 10207.872915493821 12170.077188105532 11326.2240757283 8875.174964862335 14244.10763834034 13262.187744121933 13697.962016998643 0.904666818524508 0.8016110584248439 0.7577285787786431 0.8316350964133503 0.745211068830987 0.8884589673268867 0.8268546855125524 0.6479193732504577 1.0398705749558914 0.9681869264686286 1.0 13.74167364451049 -8.786332667924778 24.986829748956815 1.0188278152252384 0.8021251991678824 0.6304605069174722 0.06862447695644766 85.36452642520449 85684.88818852454 0.011042477221397617 0.011757241566763263 1.6355632062635238e-09 8.786332667924778 -0.21670261605735597 DWSLSKS(ph)QVIAEK ddPTM_A549_PD325901_60min_R1 2 DWSLSKSQVIAEK 13 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 DWS(0.007)LS(0.027)KS(0.966)QVIAEK;DWSLS(0.002)KS(0.998)QVIAEK 126.88 1.1682000000000001e-07 31567000.0 14661.0 11937.900000000001 11832.9 12922.9 13027.3 12564.1 11111.6 11034.4 15999.2 13657.4 15445.9 True False 16149.37392714224 12943.94872906369 12635.95175100811 13721.118182964674 12112.307389745216 12461.782135214075 11534.458018500829 10814.31023568066 15326.809262716706 12795.069433213539 13546.152219627325 1.192174254748374 0.9555443139276784 0.932807453078786 1.0129162850454194 0.8941511355671481 0.9199499557636682 0.8514933120113838 0.7983307776514988 1.13145113196863 0.9445537910517847 1.0 13.725595492236195 -8.786030808154166 24.999876753304598 1.0620741374105251 0.9412987584495309 0.07614778720102644 0.10531495454510041 254.3186287939535 258541.51522972772 0.01813064130241548 0.019305760860454855 1.6367004124067148e-09 8.786030808154166 -0.12077537896099422 DYDDMS(ph)PR ddPTM_A549_MK2206_60min_R1 26 DYDDMSPR 8 0 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 DYDDMS(1)PR;DYDDMS(1)PR;DY(0.001)DDMS(0.999)PR;DYDDMS(1)PR;DY(0.001)DDMS(0.999)PR;DY(0.001)DDMS(0.999)PR;DYDDMS(1)PR;DY(0.003)DDMS(0.997)PR;DYDDMS(1)PR;DYDDMS(1)PR;DY(0.002)DDMS(0.998)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR 193.1 1.8386000000000002e-10 10402977000.0 77595.31999999999 85828.17 74888.13 72258.10999999999 102112.97 79675.41999999998 74579.74 75515.11999999998 115158.77999999997 114678.49999999999 120883.31000000001 True False 90691.51299256682 90196.45725124562 85508.39291837135 89961.35019378983 87092.28738123352 88106.62006013661 88129.91338220886 86219.61951535591 89075.5002007834 88772.54720232252 90864.64791736857 0.998094584321075 0.9926463076516778 0.9410523771151554 0.9900588650890917 0.9584837379267062 0.9696468547400297 0.9699032066063069 0.9488796962462585 0.9803097490873216 0.9769756361467599 1.0 16.471431483709615 -9.768629657463633 1.0603583256094826 0.9966935256302986 0.9712274403108919 0.07583467216104511 0.018079629907635564 0.4172213465270561 0.962307878970904 0.0051353849557197176 0.003250720642203486 1.7036106349576359e-10 9.768629657463633 -0.02546608531940664 DYDDMS(ph)PR ddPTM_A549_PD325901_60min_R1 24 DYDDMSPR 8 0 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DY(0.007)DDMS(0.993)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR 169.09 6.7397e-06 15457042700.0 122640.92000000001 122564.77000000002 119280.98000000001 131473.33 141627.71 132787.64 123730.36 126111.09000000001 148905.65999999997 137444.03999999998 142066.88999999998 True False 135091.3359149268 132893.73330899765 127376.1045976019 139594.13899650352 131680.2682386752 131706.26148544176 128438.98655765106 123595.70537771362 142647.67294358136 128765.79985805335 124593.56316621577 1.0842561403810753 1.066617969113773 1.0223329469089348 1.1203960738346974 1.0568785809825931 1.057087205297574 1.0308637404189593 0.9919910967858673 1.1449040329096316 1.0334867756071118 1.0 16.926870011273405 DYDDMS(ph)PRR ddPTM_A549_MK2206_60min_R1 5 DYDDMSPRR 9 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 DYDDMS(1)PRR;DYDDMS(1)PRR;DYDDMS(1)PRR;DYDDMS(1)PRR;DYDDMS(1)PRR 113.63 9.6074e-05 152961000.0 7228.799999999999 9013.199999999999 9029.0 7371.4 7949.800000000001 4867.86 5869.79 4478.75 8958.7 12049.099999999999 10871.0 True False 8448.844712808279 9471.933381510147 10309.447968055481 9177.393330914718 6780.394951036382 5382.973714176047 6936.254863207568 5113.626528096628 6929.568754104184 9327.199941536612 8171.430675663272 1.0339492615376669 1.1591523880536763 1.2616454054685677 1.1231072862488418 0.8297683992143786 0.6587553548251956 0.8488421597781657 0.6257932950867942 0.8480239298538397 1.1414402583522532 1.0 12.99637297600565 -6.7171807436509505 6.3346254392401935 0.870908106486977 1.1565812411582383 0.4916069935352678 0.14284022757346845 0.13102512176647058 12.800617570470742 0.020007654736345918 0.041557751565617584 1.9178703997862272e-07 6.7171807436509505 0.2856731346712613 DYDDMS(ph)PRR ddPTM_A549_PD325901_60min_R1 4 DYDDMSPRR 9 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 DYDDMS(1)PRR;DYDDMS(1)PRR;DYDDMS(1)PRR;DYDDMS(1)PRR 103.91 0.00026412 78267500.0 7212.5 7865.4 7951.1 9051.7 9440.0 10378.5 9421.1 9874.400000000001 8668.3 8061.299999999999 9781.4 True False 7944.70769043813 8528.244861623702 8490.709459848447 9610.80295109777 8776.966966232052 10293.980936980708 9779.625115923738 9677.447345683051 8304.001495825245 7552.308142249931 8578.34980940332 0.9261347306832124 0.9941591391243226 0.989783542114498 1.1203556819940714 1.0231533058503879 1.199995472986747 1.1400357100387324 1.1281245881433903 0.9680185210823015 0.8803917198586756 1.0 13.06648443229813 -4.150031169838236 16.12060726421427 1.023311284295377 1.0378278147473263 0.0 0.09567431022999774 0.0 0.0 0.012351778826516573 0.0 7.078949760855156e-05 4.150031169838236 0.014516530451949228 DYDDMSPR ddPTM_A549_MK2206_60min_R1 1 DYDDMSPR 8 0 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 50.703 0.018656 3616300.0 1081.7 1173.5 1110.2 1272.8 1394.1 973.32 946.18 1045.1 1525.9 2248.6 1854.9 False True 1264.264514974092 1233.2261375762396 1267.6430539522867 1584.6360571381633 1189.0297367531034 1076.316076362474 1118.0886584477018 1193.246125484518 1180.2860863615902 1740.6396982794759 1394.277137364346 0.9067526685289973 0.8844914002588129 0.9091758158988102 1.1365287536261692 0.852792966971237 0.7719527542401465 0.8019127822473419 0.8558170348688036 0.8465218676630738 1.2484172992823164 1.0 10.445301635654952 -4.923144733922336 12.047721074627614 0.909013007531585 0.8876633837462075 0.0 0.14012665529778237 17778337.945983365 84133687.80945206 0.014387777740689603 9128854.750141138 1.1935902596922003e-05 4.923144733922336 -0.021349623785377525 DYDEEEQGYDS(ph)EK ddPTM_A549_MK2206_60min_R1 2 DYDEEEQGYDSEK 13 0 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EK;DYDEEEQGYDS(1)EK 197.14 2.2547999999999998e-30 9413700.0 2226.67 3251.0 2351.7 2157.69 3986.6 3553.7 2525.3999999999996 3181.7 3532.3 3218.3999999999996 3239.7 True False 2602.477459145196 3416.462013856285 2685.2064222478784 2686.324146862384 3400.176421017087 3929.750175244856 2984.2324906929184 3632.7157185475935 2732.2396899240107 2491.3612047241227 2435.1930788286545 1.0686945038448477 1.4029532374901574 1.1026667435912236 1.103125731678954 1.3962656392948507 1.6137324836415412 1.225460320431083 1.4917567523208288 1.121980722464207 1.023065163244668 1.0 11.249820448273802 -8.951778809152074 6.955908667725365 1.0530420619350658 1.3027994737670117 0.32631103614603973 0.16397609153025702 0.17882673142807703 19.32958186679203 0.029120273000420777 0.030603466310059897 1.1174322231183043e-09 8.951778809152074 0.24975741183194589 DYDEEEQGYDS(ph)EK ddPTM_A549_PD325901_60min_R1 2 DYDEEEQGYDSEK 13 0 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EK;DYDEEEQGYDS(1)EK 188.25 2.198e-25 12969400.0 3122.2 3583.8 3473.4 2838.7 3412.4 3006.3 2837.9 2802.9 3572.6 3312.3 3649.9 True False 3439.16344555784 3885.8194033471937 3709.125811250967 3014.04005184454 3172.724796140915 2981.8176895355887 2945.8978374584667 2746.9939606674866 3422.4560460511616 3103.1608127193444 3200.985438622405 1.0744077133440315 1.2139447297890607 1.1587449809978667 0.9415975516407472 0.9911712680287441 0.9315311633591377 0.9203096652405519 0.8581713392141199 1.06918825832712 0.9694392155856976 1.0 11.644300398698025 -6.24890954239702 24.203919434975983 0.9977663405723557 1.1555237297817336 0.5754268125567525 0.06673116758398052 350.4190477696696 676902.9830728734 0.010662320466453778 0.027983879441472854 5.637550660707545e-07 6.24890954239702 0.15775738920937787 DYDEEEQGYDS(ph)EKEK ddPTM_A549_MK2206_60min_R1 2 DYDEEEQGYDSEKEK 15 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK 223.23 1.491e-54 257200000.0 46758.0 44893.0 40320.0 40251.0 56860.0 49286.0 45609.0 55483.0 63263.0 53654.0 56311.0 True False 54649.60727665577 47177.86194649348 46037.9822872962 50112.49680693606 48495.969321986566 54501.41180660098 53895.5649275415 63347.88515956125 48934.03151025182 41533.524135678665 42327.42459546264 1.2911158143676436 1.114593254784294 1.087663204820435 1.1839250151852603 1.1457339959961839 1.2876146452917752 1.2733013038860608 1.4966156284016376 1.156083366231958 0.9812438279112999 1.0 15.36930509035586 -9.772377864293135 1.2532718353814072 1.0304127178834817 1.2233524709572603 0.3959823865741434 0.10971499645050374 0.33541777317925714 1.0678711809515056 0.03262497939701828 0.021949500291994085 1.6889707783375475e-10 9.772377864293135 0.19293975307377864 DYDEEEQGYDS(ph)EKEK ddPTM_A549_PD325901_60min_R1 2 DYDEEEQGYDSEKEK 15 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK 231.76 3.7865e-55 373980000.0 84955.0 86034.0 84307.0 82618.0 92402.0 75817.0 78997.0 75458.0 87245.0 83838.0 83990.0 True False 93579.56905943445 93284.38711634927 90028.57999917514 87721.1262209083 85912.0022895947 75199.5714890463 82003.27406381711 73952.93099434413 83578.39605266001 78544.4543721175 73659.76245647718 1.2704299598403828 1.2664225895578682 1.2222219702699921 1.1908961323726703 1.1663355870901282 1.020904344260938 1.1132709545767243 1.0039800364281677 1.1346547051661127 1.066314250178671 1.0 16.168589124283503 -2.0000000007458887 0.19648799840989306 1.0224454586179639 2.3465874765160475 0.7516804822313874 0.047713353573948104 19.915987491538406 0.21935721590451643 0.04542284109868973 8.177386314387995 0.009999999982825278 2.0000000007458887 1.3241420178980836 DYDEEEQGYDS(ph)EKEKK ddPTM_A549_MK2206_60min_R1 3 DYDEEEQGYDSEKEKK 16 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGY(0.001)DS(0.999)EKEKK 137.43 1.177e-30 82862400.0 24343.2 26758.8 25109.7 24881.7 37454.3 28786.7 29312.5 30800.5 39205.4 35135.0 39448.0 True False 28451.737025901188 28120.708623924227 28670.6330317292 30977.717616981972 31944.822085411182 31832.889486935033 34638.201822854244 35166.565197575255 30325.43949815893 27197.97909768275 29651.972890586403 0.9595225629972752 0.9483587728778645 0.9669047364073118 1.0447101692453136 1.077325350434024 1.073550471815014 1.1681584207117233 1.185977247697389 1.0227123709460266 0.917240117480253 1.0 14.855840477061864 -6.22954550626178 4.449246173150783 1.045894954306757 0.9553345225686944 0.2772230328073464 0.07110325630017844 0.24727739675562196 11.84237659658659 0.010317082742982936 0.027663008417059123 5.894602089862516e-07 6.22954550626178 -0.09056043173806261 DYDEEEQGYDS(ph)EKEKK ddPTM_A549_PD325901_60min_R1 3 DYDEEEQGYDSEKEKK 16 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK 254.4 3.3300999999999993e-78 399475000.0 62091.8 62060.3 68532.4 63415.3 75587.2 63287.7 61261.1 62504.9 71117.5 67167.8 67340.8 True False 68395.31382643266 67290.3392816418 73183.42078279963 67332.31905440424 70278.21583368379 62772.30595417008 63592.424683860205 61258.19073535456 68128.67879276809 62926.81364507156 59058.30850850265 1.1580980822805949 1.1393881907734285 1.2391723134478765 1.1400990098575272 1.18998016720316 1.062886959336682 1.0767735529490279 1.0372493266808547 1.1535833062838157 1.0655031482320894 1.0 15.849852416323703 -7.264364409754693 24.94940141133737 1.0710260801393225 1.1732707130934137 0.6072115117254083 0.04288660991970894 190.00504635221472 1620669.8661459172 0.008746638301759074 0.014370461784968999 5.440459607515629e-08 7.264364409754693 0.10224463295409114 DYDEEEQGYDS(ph)EKEKKEEK ddPTM_A549_MK2206_60min_R1 4 DYDEEEQGYDSEKEKKEEK 19 3 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK 198.56 2.7668e-55 2650600000.0 36575.7 36343.299999999996 36393.6 30876.300000000003 46692.4 36091.299999999996 38239.8 34713.3 50166.8 47656.5 50687.1 True False 42748.78396998972 38193.01873521476 41554.75972646187 38440.99488608977 39824.00981304825 39910.45741053397 45187.47667601137 39634.01658002266 38804.099899917856 36890.863551123315 38100.09417720652 1.1220125538577879 1.0024389587483968 1.0906734123329833 1.0089475030507193 1.0452470177061417 1.0475159779109025 1.1860200782140033 1.0402603310029037 1.018477794816909 0.9682617418093777 1.0 15.217506943378831 -8.655077611528927 4.142156594905431 1.008652051192761 1.0682230939627548 0.2899472276457281 0.050527155164442186 0.2361246594413112 7.415115892194033 0.008151066753029693 0.00920801911757127 2.2126992490952565e-09 8.655077611528927 0.05957104276999381 DYDEEEQGYDS(ph)EKEKKEEK ddPTM_A549_PD325901_60min_R1 6 DYDEEEQGYDSEKEKKEEK 19 3 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK 265.13 1.5065999999999996e-111 4103490000.0 77401.2 75804.0 85444.9 77476.5 82908.4 74925.5 84384.0 79765.1 89942.0 80329.40000000001 87440.0 True False 85258.91284424829 82192.26911416106 91243.70473592402 82262.047443102 77085.20000245259 74315.3315694704 87595.2792966965 78174.1225059896 86162.05052173027 75257.38797489877 76685.43432782902 1.1118006123531594 1.071810700879523 1.1898440106090895 1.0727206302494559 1.0052130587526515 0.9690931820477607 1.1422674992258384 1.0194129196921082 1.1235777860159057 0.9813778670558821 1.0 16.226664957035542 DYDS(ph)PERER ddPTM_A549_MK2206_60min_R1 2 DYDSPERER 9 1 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3 P52756 RBM5 RNA-binding protein 5 1 DYDS(1)PERER;DYDS(1)PERER 116.55 5.3083999999999995e-05 119751000.0 1373.42 1404.1 1293.28 1070.96 1706.2399999999998 1772.9099999999999 1457.87 1747.22 1882.58 1573.06 1897.2199999999998 True False 1605.21971910485 1475.5626926040027 1476.6865509056147 1333.3452480772207 1455.2543562424598 1960.5181594375886 1722.7461080250594 1994.8937856368377 1456.1786358625095 1217.704653462382 1426.087913391765 1.1256106331390492 1.0346926572672286 1.035480728108485 0.934967077103986 1.0204520651053877 1.3747526649845525 1.2080223749514372 1.3988575086456219 1.0211001875748162 0.853877690167242 1.0 10.477847206349121 -8.960115693738937 24.999836819402944 1.0093084214210046 1.1383384971597807 0.22207548284054324 0.1444753330944767 222.90798882392917 139721.3628048045 0.02540337050887162 0.027006440999373528 1.0961861390894504e-09 8.960115693738937 0.12903007573877612 DYDS(ph)PERER ddPTM_A549_PD325901_60min_R1 3 DYDSPERER 9 1 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3 P52756 RBM5 RNA-binding protein 5 1 DYDS(1)PERER;DY(0.001)DS(0.999)PERER;DYDS(1)PERER 105.46 0.0001582 201480000.0 2981.4300000000003 3047.95 3076.8300000000004 2905.84 3424.3 3088.3799999999997 2973.18 2927.14 3205.62 3683.13 3429.32 True False 3284.102578787239 3304.811443281453 3285.6421862818347 3085.3271371585356 3183.788981193689 3063.229257229124 3086.325991886523 2868.7558964030936 3070.898939243832 3450.576543233103 3007.5353802505797 1.0919580864626826 1.0988437459399414 1.0924700031319612 1.0258656165506104 1.0586039991750402 1.0185181119877313 1.0261977339163932 0.9538560760552305 1.021068267196236 1.1473103744321074 1.0 11.554365993837944 -6.525967854138795 0.8095742213200299 1.0062618037279834 1.1058113953378481 0.1694080452369564 0.04774730635831221 0.30080890092761353 0.3291705182679487 0.0036091928447182773 0.0182278913388175 2.978736903147698e-07 6.525967854138795 0.09954959160986476 DYDS(ph)PERERER ddPTM_A549_MK2206_60min_R1 1 DYDSPERERER 11 2 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5 P52756 RBM5 RNA-binding protein 5 1 DYDS(1)PERERER 49.31 0.0093992 4337700.0 376.75 384.16 324.71 279.4 250.2 259.37 198.18 171.01 432.19 655.65 469.92 True False 440.3361893468511 403.7121031199726 370.7587606276772 347.8530125427425 213.3959114379358 286.81636124412836 234.186740716529 195.25119119616053 334.299655065611 507.53820963129897 353.2258948677843 1.2466135573431643 1.1429289556222535 1.0496364111879612 0.9847891040744537 0.6041343925756402 0.8119913217333241 0.6629942598183161 0.5527657910506387 0.946418877898922 1.436865804590219 1.0 8.464447300110871 -2.2891699846249045 8.084674239892246 0.9266480313171982 1.2245924779546475 0.0 0.26288917901501063 0.0 0.0 0.029435837902124985 0.0 0.00513842492178333 2.2891699846249045 0.29794444663744934 DYDT(ph)LSK ddPTM_A549_MK2206_60min_R1 2 DYDTLSK 7 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 DYDT(0.846)LS(0.154)K;DYDT(0.5)LS(0.5)K 113.71 0.0079196 284300000.0 10824.0 9686.6 9204.0 9065.8 13157.6 10195.3 9177.5 9007.1 14399.2 13251.5 12318.4 True False 12650.826578607339 10179.606565186194 10509.265599510763 11286.921406979222 11222.134469767327 11274.15987890758 10844.932954515827 10283.884008086881 11137.804190797444 10257.976946433551 9259.40130945548 1.3662683099919881 1.0993806429786148 1.1349832724907336 1.2189688112398032 1.2119719293630302 1.217590587351979 1.171234790681471 1.1106424340400092 1.202864398956743 1.1078445143055147 1.0 13.176703199983205 -11.509741341310848 0.3985401966116802 0.8691938647725691 1.1990846775437451 0.3042891178796512 0.07479599502628864 2.3533675289467673 0.3042109247773978 0.3529001355848674 0.01829337059154714 3.0921365101250023e-12 11.509741341310848 0.32989081277117605 DYDT(ph)LSK ddPTM_A549_PD325901_60min_R1 2 DYDTLSK 7 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 DYDT(0.5)LS(0.5)K;DYDT(0.5)LS(0.5)K 125.82 0.006312600000000001 414610000.0 15482.5 15841.0 20437.7 17538.199999999997 18421.5 17304.8 19270.2 20175.3 21194.0 18743.1 20142.5 True False 17054.272002385907 17175.97666399433 21824.725223874004 18621.49478185787 17127.637390724976 17163.875446188154 20003.538006058054 19772.887814283335 20303.28988412032 17559.65746728254 17665.100193827726 0.9654217533589057 0.9723113073536771 1.2354713522372023 1.0541403432494718 0.9695748794399399 0.9716262720199741 1.1323761420298872 1.1193193130708696 1.1493447340431384 0.9940310145208219 1.0 14.108614311553472 -7.769233370114948 24.999219006242893 1.0809684236434915 1.0335061623922945 0.07878403365199771 0.08550130743616903 447.3070124791603 1434736.7980498383 0.014602580478334704 0.02038477386651931 1.7012440914843826e-08 7.769233370114948 -0.04746226125119701 DYDTLSKCS(ph)PK ddPTM_A549_MK2206_60min_R1 2 DYDTLSKCSPK 11 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 DYDTLS(0.013)KCS(0.987)PK;DYDT(0.001)LS(0.112)KCS(0.888)PK 86.944 8.6163e-05 34146000.0 14528.3 16888.5 16705.8 13270.8 21316.0 18420.2 16940.5 14711.0 24217.0 26476.0 25830.0 True False 16980.321857167502 17748.052513384166 19074.93364323197 16522.14659574884 18180.444637134464 20369.41333766084 20018.369568616225 16796.329300548023 18731.88816660242 20495.053211619408 19415.698128266253 0.8745666390664975 0.914108387766173 0.982449022292009 0.8509684527745696 0.9363786208988565 1.0491208301187032 1.0310404208166264 0.8650901548626349 0.9647805627618247 1.0555918760284897 1.0 14.244935962566109 -7.009047418021939 24.840852150582506 0.98166868860063 0.9093863723585236 0.3335920488539893 0.057721362578985885 396.7617288822249 1089365.2202208021 0.007731796058542527 0.014085090423130931 9.793830465824138e-08 7.009047418021939 -0.07228231624210635 DYDTLSKCS(ph)PK ddPTM_A549_PD325901_60min_R1 2 DYDTLSKCSPK 11 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 DYDT(0.003)LS(0.024)KCS(0.973)PK;DY(0.001)DT(0.06)LS(0.042)KCS(0.897)PK 71.344 0.00071417 53555000.0 18459.699999999997 18180.1 20623.0 16598.5 17383.699999999997 19710.2 19033.3 19813.5 14264.0 17121.5 18821.5 True False 20333.715154687103 19712.200830066486 22022.600796173407 17623.751647071407 16162.72888250933 19549.686666095982 19757.62264692139 19418.304199109945 13664.533684396161 16040.445568026531 16506.574819318776 1.231855510744068 1.1942029794694866 1.334171446059109 1.0676807175311211 0.9791691528634384 1.184357559341484 1.1969547203577142 1.176398157198753 0.8278236904971722 0.9717609948523844 1.0 14.010753165831078 -8.749458323123477 24.99934191308253 0.9186945220164423 1.1683636117059486 0.5578197697978531 0.0938784054257468 123.50372279086368 257699.25289871913 0.018038243705996573 0.02037614619647663 1.780498765426508e-09 8.749458323123477 0.2496690896895063 DYDVDHPGEADS(ph)VLR ddPTM_A549_MK2206_60min_R1 2 DYDVDHPGEADSVLR 15 0 M0R2Z9;Q8IX01-4;Q8IX01;M0R3F6;Q8IX01-3 M0R2Z9 SUGP2 SURP and G-patch domain-containing protein 2 1 DYDVDHPGEADS(1)VLR;DYDVDHPGEADS(1)VLR 48.14 0.0084798 3062900.0 117.89 273.76 0.0 275.1 342.95 0.0 239.188 261.26 359.26 347.35 327.47 True False 137.78694986622503 287.69321467649854 0.0 342.49951234970825 292.50250930311785 0.0 282.6453635003793 298.29440507519365 277.88818362033237 268.88339375494814 246.1501612877797 0.5597678634268096 1.1687711808571595 0.0 1.3914250982321492 1.1883092327579123 0.0 1.1482639784661048 1.211839161569555 1.1289376458926916 1.0923551394329192 1.0 7.9433948746613545 DYDVDHPGEADS(ph)VLR ddPTM_A549_PD325901_60min_R1 2 DYDVDHPGEADSVLR 15 0 M0R2Z9;Q8IX01-4;Q8IX01;M0R3F6;Q8IX01-3 M0R2Z9 SUGP2 SURP and G-patch domain-containing protein 2 1 DYDVDHPGEADS(1)VLR;DYDVDHPGEADS(1)VLR 76.378 0.00019058 4389700.0 259.92 482.96000000000004 331.1 152.46 280.85 211.38 88.71600000000001 121.03 261.57000000000005 602.21 492.24 True False 286.30688705700925 523.6607341482677 353.5704370660435 161.87710793821768 261.1240648799015 209.65859136281563 92.09213592725797 118.61596170380174 250.57712253417748 564.1863578261987 431.6976005664517 0.6632116710431837 1.213026742472385 0.8190234011078734 0.37497801175130635 0.604877267182555 0.48566077524570966 0.21332556819037063 0.2747663214902281 0.5804459468975108 1.3069017689371032 1.0 8.753877263902558 -6.002765700333275 24.95975462510661 0.6565772765268224 0.9575957027492524 0.13201128995099776 0.3236158266136229 175.20259919818506 1581226.0499581017 0.04397307425683989 0.13330010049824895 9.93651974035497e-07 6.002765700333275 0.30101842622243 DYEEVGADS(ph)ADGEDEGEEY ddPTM_A549_MK2206_60min_R1 2 DYEEVGADSADGEDEGEEY 19 0 Q9BQE3;F5H5D3 Q9BQE3 TUBA1C Tubulin alpha-1C chain 1 DYEEVGADS(0.984)ADGEDEGEEY(0.016);DYEEVGADS(0.972)ADGEDEGEEY(0.028) 57.019 0.0069299999999999995 5886300.0 0.0 143.33 0.0 0.0 0.0 0.0 312.1 0.0 196.69 0.0 142.2 True False 0.0 150.62488478807188 0.0 0.0 0.0 0.0 368.8045301121642 0.0 152.1400290493881 0.0 106.88781547965387 0.0 1.4091866702687303 0.0 0.0 0.0 0.0 3.4503888816248307 0.0 1.4233617589307734 0.0 1.0 6.739953594292798 DYEEVGADS(ph)ADGEDEGEEY ddPTM_A549_PD325901_60min_R1 2 DYEEVGADSADGEDEGEEY 19 0 Q9BQE3;F5H5D3 Q9BQE3 TUBA1C Tubulin alpha-1C chain 1 DYEEVGADS(0.928)ADGEDEGEEY(0.072);DYEEVGADS(0.964)ADGEDEGEEY(0.036) 67.153 0.0016722000000000002 11000100.0 0.0 0.0 0.0 217.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 230.61595070300987 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 DYEIESQNPLAS(ph)PTNTLLGSAK ddPTM_A549_MK2206_60min_R1 4 DYEIESQNPLASPTNTLLGSAK 22 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 DYEIESQNPLAS(0.974)PT(0.026)NT(0.001)LLGSAK;DYEIESQNPLAS(0.929)PT(0.061)NT(0.009)LLGSAK;DYEIESQNPLAS(0.862)PT(0.137)NT(0.001)LLGSAK;DYEIES(0.005)QNPLAS(0.712)PT(0.126)NT(0.156)LLGS(0.001)AK 142.22 2.8111e-27 62607600.0 2963.33 2752.71 2928.9100000000003 2744.54 4019.2400000000002 3390.16 3009.58 2898.6899999999996 4304.98 3602.79 4408.19 True False 3463.467657537371 2892.811181224958 3344.2734796895984 3416.9524232070835 3428.015120255034 3748.904480993922 3556.381729365485 3309.588184365816 3329.908903640421 2788.9172367536758 3313.514763145258 1.045254934747831 0.8730340402886997 1.0092828065492436 1.0312169003175469 1.0345555596683353 1.1313981524064143 1.0732958757032043 0.9988149807500134 1.0049476588055404 0.8416794359190894 1.0 11.694146631922818 -5.972130773753614 24.99847595212262 1.02026667735417 0.9546479236517483 0.068026597388129 0.07589216345588344 265.13085405363455 237817.53750419745 0.007448481200989504 0.023157755944072992 1.0662749986143462e-06 5.972130773753614 -0.06561875370242165 DYEIESQNPLAS(ph)PTNTLLGSAK ddPTM_A549_PD325901_60min_R1 2 DYEIESQNPLASPTNTLLGSAK 22 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 DYEIESQNPLAS(0.996)PT(0.004)NTLLGSAK;DYEIESQNPLAS(1)PTNTLLGSAK 198.56 6.504399999999999e-61 95066000.0 3419.2 2976.1000000000004 3663.8 3552.2 4361.200000000001 3616.8 3811.2 3625.3 4666.2 4715.1 4384.299999999999 True False 3766.3146669179982 3226.9063916238565 3912.4475002191825 3771.6113263684692 4054.8843573232202 3587.3459799462184 3956.237301568663 3552.9905475071696 4470.095841147603 4417.387781315998 3845.058894367575 0.9795206706547656 0.8392345813872403 1.0175260269615953 0.9808981942755949 1.0545701558077583 0.9329755612329199 1.0289146175014243 0.9240406051287691 1.1625558837851904 1.1488478857337654 1.0 11.908789980628466 -8.748034654957749 24.999309835239977 1.0767625068998872 0.9709053461615378 0.4152718582799034 0.06884364878076121 219.32429308731489 409031.46219977224 0.013018574352706374 0.014720278438574402 1.7863450259964695e-09 8.748034654957749 -0.10585716073834939 DYEPPS(ph)PSPAPGAPPPPPQR ddPTM_A549_MK2206_60min_R1 1 DYEPPSPSPAPGAPPPPPQR 20 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y8L4 A8MQ02 MLLT4 Afadin 1 DYEPPS(0.968)PS(0.032)PAPGAPPPPPQR 161.14 5.785800000000001e-27 3353400.0 900.45 1098.7 671.76 934.24 1110.9 767.62 732.37 764.87 1553.7 1178.9 1275.7 True False 1052.4239461111406 1154.6191370728704 767.0256691794167 1163.1288419396267 947.4880816003317 848.849038895083 865.4321490491697 873.2926648161349 1201.7894307490674 912.5856712183913 958.9084824711283 1.0975228244920943 1.204097323341422 0.7998945501063611 1.2129716893756306 0.9880902076897203 0.8852242465387107 0.9025179825492126 0.9107153401809945 1.2532889767040432 0.9516921457057486 1.0 9.905249321821707 -8.747861943583992 24.987779126204085 1.1196086975408404 0.9998632984916339 0.009815550792760308 0.14388394515407252 373.8616266439654 688050.8694135954 0.025184008435634942 0.028480785520610914 1.7870555656679997e-09 8.747861943583992 -0.11974539904920645 DYETATLSDIK ddPTM_A549_PD325901_60min_R1 2 DYETATLSDIK 11 0 O43707;O43707-2 O43707 ACTN4 Alpha-actinin-4 0 ; 199.11 1.5942e-23 10804900.0 6979.8 8375.8 8289.4 7717.6 8777.5 9412.7 8567.4 8202.1 8612.4 9285.3 9370.2 False True 7688.384157742819 9081.65806087266 8851.96853221161 8194.298624058702 8160.998680731121 9336.046091970742 8893.437095261163 8038.502681077021 8250.450778427756 8699.02457336079 8217.72480259176 0.9355854987158984 1.1051304684732721 1.077179967065801 0.9971493108985994 0.993097101299529 1.1360864857662645 1.0822262011568327 0.9781907856712099 1.0039823645378918 1.0585684946053724 1.0 13.004523302611814 -8.269161256784605 24.813896683982428 1.000156373243808 1.0495387860309175 0.07654263855738996 0.05659926232114494 710.5575266218113 2283339.5142565817 0.008497385000823697 0.010371439227998885 5.380699560268693e-09 8.269161256784605 0.04938241278710964 DYFEQYGK ddPTM_A549_MK2206_60min_R1 2 DYFEQYGK 8 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;A0A2R8Y4L2;Q32P51;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ; 135.83 0.0029958000000000003 14647300.0 7758.200000000001 8440.6 7793.7 6736.8 11214.5 9009.8 8806.2 9355.5 12964.8 10872.3 11469.3 False True 9067.594490220947 8870.190487282489 8898.963852988592 8387.316302426441 9564.861905758324 9963.21105577879 10406.172550700865 10681.670775017132 10028.293500531327 8416.239878859707 8621.156273423301 1.05178403019719 1.0288864052524942 1.032223935021535 0.9728760315228567 1.1094639283183176 1.1556699286953747 1.207050680983511 1.2390067452953892 1.1632190836681444 0.9762309847931541 1.0 13.073665661872306 -6.78512095234622 23.92411243948439 1.1091008835267226 1.0227444135453099 0.27427341778693737 0.07662330595105563 191.2732696356058 193231.87297368931 0.013027092834724936 0.02463071657888061 1.6401329275315425e-07 6.78512095234622 -0.08635646998141278 DYFEQYGK ddPTM_A549_PD325901_60min_R1 2 DYFEQYGK 8 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;A0A2R8Y4L2;Q32P51;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ; 126.41 0.0029823000000000002 21305500.0 9440.9 10191.900000000001 10301.3 9385.9 12098.8 9887.1 10348.2 10460.8 10638.9 9965.5 11277.9 False True 10399.333217976751 11050.807181476164 11000.408164749131 9965.645726074496 11249.022026594099 9806.582735657552 10742.006413752324 10252.151137661152 10191.78403077134 9336.27662927713 9890.789796498435 1.051415855754851 1.1172825839841831 1.1121870337031656 1.007568245925372 1.1373229295173686 0.9914863157974811 1.0860615415722654 1.0365351350698655 1.0304317694002014 0.9439364116890225 1.0 13.271870011915174 -8.11195670563892 0.28233719922107076 0.9944719946721499 1.102561284420467 0.3991238423681418 0.044800916120594544 1.3316287934747364 0.3043188944556985 0.03255792568796494 0.05144268995397828 7.727576166517832e-09 8.11195670563892 0.10808928974831722 DYFGAHTYELLAK ddPTM_A549_MK2206_60min_R1 2 DYFGAHTYELLAK 13 0 P52209-2;P52209 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 129.34 5.1034e-08 13661000.0 2502.4 3286.8999999999996 2410.3 2344.17 3321.6 2332.9 2391.53 2426.3 3554.0 3423.1 3414.2 False True 2924.743942193922 3454.189170514987 2752.116783409475 2918.4917552337893 2832.9970400969123 2579.7659295463113 2826.040044534266 2770.2354552321162 2749.024674571788 2649.8193325538005 2566.359912873659 1.1396468311098913 1.3459488488686642 1.0723814573334012 1.1372106229503225 1.103897012217857 1.005223747692365 1.1011861704813775 1.0794415239015205 1.0711765956060277 1.0325205436936118 1.0 11.325507796518439 -2.0000000000006657 0.19738914363091234 1.0076337966783284 2.088105768528561 0.4501385909946368 0.0667015730299659 27.777146224923207 0.3066572493942102 0.051011173293632424 9.362492397193774 0.009999999999984672 2.0000000000006657 1.0804719718502325 DYFGAHTYELLAK ddPTM_A549_PD325901_60min_R1 2 DYFGAHTYELLAK 13 0 P52209-2;P52209 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 135.6 2.2567e-08 24166000.0 4186.0 3488.3 4234.9 4163.0 5177.6 4242.2 4608.6 4096.1 4808.4 4981.5 4469.3 False True 4610.95963842967 3782.2712831899166 4522.3057805224635 4420.139055141021 4813.943237750325 4207.6529296969275 4783.982794922688 4014.400072171714 4606.31966966142 4666.96723985189 3919.6044332269703 1.1763839226586226 0.9649624975232542 1.1537658601940337 1.1277002897718345 1.228170678893496 1.073489175088214 1.2205269374552892 1.0241850014611549 1.175200137700907 1.190673017993712 1.0 11.936492349457298 -10.934157474098107 1.0968317031586359 0.9973063196663458 1.1287260073494165 0.0 0.09462125228247713 0.5364891633421214 1.1068508675536513 0.05582331742253093 0.012034281056696003 1.1637039967285532e-11 10.934157474098107 0.13141968768307077 DYLHLPPEIVPAT(ph)LRR ddPTM_A549_PD325901_60min_R1 1 DYLHLPPEIVPATLRR 16 1 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 1 DYLHLPPEIVPAT(1)LRR 46.361999999999995 0.011134 1522700.0 0.0 101.9 158.64 0.0 0.0 163.37 0.0 107.38 0.0 95.67 179.83 True False 0.0 110.48747061808109 169.40626437981626 0.0 0.0 162.0395688851509 0.0 105.2382216620196 0.0 89.62937987285565 157.71205003629333 0.0 0.700564545275109 1.0741491492934865 0.0 0.0 1.0274393671749351 0.0 0.6672807920371446 0.0 0.5683102835340088 1.0 7.301149083659971 -11.051075678889783 1.3603553397185084 0.9993547842107963 0.3598322450345041 0.08595042056463553 0.42378442220795987 0.49037747079580113 1.620992674856618 0.2850695050424786 0.06378665158859131 8.890461817642822e-12 11.051075678889783 -0.6395225391762922 DYLHLPPEIVPATLR ddPTM_A549_PD325901_60min_R1 2 DYLHLPPEIVPATLR 15 0 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 0 ; 55.885 0.014227000000000002 2436500.0 533.45 460.83000000000004 674.55 742.5699999999999 663.53 662.05 430.53 528.02 721.8900000000001 796.08 859.4200000000001 False True 587.6054512948658 499.6657613830259 720.3290193986704 788.4368624011696 616.9259418542325 656.6584843019776 446.91405474505547 517.4882268763231 691.5514737400971 745.8153729401374 753.7167883122462 0.7796104059333164 0.6629356929966999 0.9557025006855174 1.0460651462556247 0.8185116099585344 0.8712270901811733 0.5929469287075374 0.6865817969042511 0.9175216533104533 0.9895167316230252 1.0 9.557878717443696 -8.959220395025898 6.17326987028011 0.9644001706561529 0.8056210142893706 0.27324696455542574 0.12333313320696607 0.20734299080036017 18.652865980482662 0.02350389311140165 0.02453879145296516 1.0984482593079865e-09 8.959220395025898 -0.1587791563667823 DYLHYHIK ddPTM_A549_MK2206_60min_R1 2 DYLHYHIK 8 0 H7C3F9;O15144 H7C3F9 ARPC2 Actin-related protein 2/3 complex subunit 2 0 ; 63.486000000000004 0.0096988 2772800.0 515.74 628.4000000000001 631.57 476.68 729.47 419.99 394.31 754.61 1105.04 1007.25 758.98 False True 602.7843033676047 660.3828758865858 721.1361228469162 593.4666213989781 622.165929323066 464.43306303320105 465.95102296868816 861.5782783962036 854.750204386272 779.711525434494 570.5043192176353 1.0565814895042982 1.1575422895872305 1.264032713785324 1.0402491294243528 1.0905542839294842 0.81407457820846 0.816735311675945 1.5102046546776973 1.4982361668329507 1.3667057359070591 1.0 9.156093998795736 -8.25783963599608 24.91318210494262 1.2624716218322236 1.0417601011474265 0.37314970701222083 0.18205969434718594 424.5792610742674 2938440.0815833574 0.03817089758041033 0.04828765826858218 5.522813324912095e-09 8.25783963599608 -0.22071152068479716 DYLHYHIK ddPTM_A549_PD325901_60min_R1 2 DYLHYHIK 8 0 H7C3F9;O15144 H7C3F9 ARPC2 Actin-related protein 2/3 complex subunit 2 0 ; 87.616 0.0026593000000000003 6277100.0 798.1800000000001 672.27 732.36 897.9200000000001 814.99 841.4 1178.46 922.26 1042.6000000000001 1122.55 1137.6599999999999 False True 879.2106460109405 728.9245522317701 782.0623536384411 953.3824790757217 757.7479139628659 834.5479173652805 1223.3069401780558 903.8648008010267 998.783147739165 1051.672001424418 997.7350322209273 0.8812065504544275 0.7305792907854569 0.7838377208201204 0.9555467617023747 0.7594680847039544 0.8364424325239964 1.226083980889207 0.9059166728756147 1.0010504948552368 1.054059412029894 1.0 9.96251292071236 -7.563530024997986 24.999922603555337 1.0083338504434158 0.8198892071790564 0.5566598681850969 0.09303332563091044 86.01890163151616 52900.008337745785 0.012878380807572361 0.019101736574590755 2.7319325648834966e-08 7.563530024997986 -0.1884446432643594 DYLLS(ph)ES(ph)EDEGDNDGER ddPTM_A549_PD325901_60min_R1 2 DYLLSESEDEGDNDGER 17 0 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 2 DYLLS(1)ES(1)EDEGDNDGER;DYLLS(1)ES(1)EDEGDNDGER 102.38 1.7832e-08 12332800.0 2426.6000000000004 2433.6 3198.7 2998.4 2669.6 2478.2 2946.6 2658.5 2773.1 2829.0 2961.5 True False 2672.946645631495 2638.688012719942 3415.7830173456755 3183.6043581395256 2482.09650562003 2458.0183608445896 3058.7344754413884 2605.4741319470972 2656.556250715017 2650.376457199838 2597.2542744952593 1.0291432270915968 1.0159529001960097 1.3151515625128718 1.2257576739413454 0.9556617270761413 0.94639111194543 1.1776800236610685 1.0031648258441832 1.0228325646826715 1.0204532083078013 1.0 11.342771547271273 -6.765884722359666 24.999855801715167 1.0151329842564394 1.1492228976594876 0.29393282620387984 0.09568584998658919 106.08625566202373 596615.7063457243 0.013824141501053313 0.02677541364792356 1.7144123148529876e-07 6.765884722359666 0.1340899134030482 DYLLS(ph)ES(ph)EDEGDNDGERK ddPTM_A549_PD325901_60min_R1 2 DYLLSESEDEGDNDGERK 18 1 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 2 DYLLS(1)ES(1)EDEGDNDGERK;DYLLS(1)ES(1)EDEGDNDGERK 101.17 1.9045e-09 23575000.0 6021.2 6701.299999999999 6080.1 6212.5 7159.2 6204.9 6494.0 6294.5 6113.7 6753.6 7789.4 True False 6632.467791426836 7266.042069214391 6492.732148611451 6596.232015388804 6656.362489899201 6154.36935162804 6741.132723653156 6168.951259560278 5856.762449964446 6327.176543423412 6831.353181074924 0.9708863845308034 1.0636314470380037 0.9504313386399691 0.9655820509562466 0.9743841832595475 0.9009004787920569 0.9867931791798281 0.9030350350865016 0.8573356251276231 0.9261966664162168 1.0 12.737955666143927 -6.3536485701785415 0.981922301738345 0.9313901837519488 1.0147567411015408 0.2823721253401832 0.0453967909532502 0.8167856909645025 1.3338286168616202 0.00924676752091321 0.047620209374073706 4.429466585184311e-07 6.3536485701785415 0.08336655734959197 DYLLSES(ph)EDEGDNDGER ddPTM_A549_MK2206_60min_R1 2 DYLLSESEDEGDNDGER 17 0 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DYLLSES(1)EDEGDNDGER;DYLLS(0.01)ES(0.99)EDEGDNDGER 188.47 1.8062e-39 13333300.0 1059.7 1577.14 1380.67 1105.3600000000001 1702.92 1437.49 1820.6599999999999 1375.85 1900.4 1622.9499999999998 1894.27 True False 1238.5514528224503 1657.4096894904044 1576.4697669791963 1376.1732496214959 1452.4227238444832 1589.6042376713654 2151.4503549952346 1570.8809508639108 1469.9624343152009 1256.3244678122721 1423.8704798076233 0.8698483958946805 1.1640171722039874 1.1071721686316514 0.9665017072391502 1.0200525570561148 1.1163966527953681 1.5109874005435617 1.1032470812065363 1.032370889881645 0.8823305810666234 1.0 10.475602204395042 -8.789912540915452 4.757644947976626 1.014536399142553 1.115543949946832 0.1137145010146069 0.15618287484253413 0.3953056904467926 21.16052305101995 0.026934341885532943 0.029047227572540323 1.622136733582759e-09 8.789912540915452 0.10100755080427914 DYLLSES(ph)EDEGDNDGER ddPTM_A549_PD325901_60min_R1 2 DYLLSESEDEGDNDGER 17 0 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DYLLS(0.01)ES(0.99)EDEGDNDGER;DYLLS(0.351)ES(0.649)EDEGDNDGER 270.79 3.4374999999999994e-100 16564000.0 2957.9 3296.2 3695.4 3604.3 4239.3 2636.8 2866.8999999999996 3449.2 2864.7 3339.0 2677.6000000000004 True False 3258.1838305091073 3573.9823420149078 3946.1920662454195 3826.929425040783 3941.5461927910524 2615.3267750282553 2976.0014483278746 3380.4030001549436 2744.306621262597 3128.174970162697 2348.272174704882 1.3874813429233679 1.5219625648649804 1.680466220548457 1.6296788192883689 1.678487798496528 1.1137238703417907 1.2673153820859295 1.4395277670825248 1.168649294925741 1.3321177178091923 1.0 11.197383917275442 -8.294092697228967 0.4682305800228935 1.0184929209150428 1.5933481086149466 0.38949481800698693 0.17316547149118824 0.3975290999500986 0.20198237545887385 0.05537539172154968 0.0768049688953911 5.080509909283163e-09 8.294092697228967 0.5748551876999037 DYLLSES(ph)EDEGDNDGERK ddPTM_A549_MK2206_60min_R1 2 DYLLSESEDEGDNDGERK 18 1 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 DYLLS(0.114)ES(0.886)EDEGDNDGERK;DYLLS(0.49)ES(0.51)EDEGDNDGERK 96.131 1.0215999999999999e-06 4802200.0 2972.7 3440.7 3080.2 2847.5 4457.0 3926.6000000000004 3033.37 3823.6 4842.8 4327.7 4631.6 True False 3474.419084462867 3615.8169335820726 3517.018676620279 3545.1376278291336 3801.381204152198 4342.110205733867 3584.4940644227345 4365.607009283897 3745.913532362483 3350.0695642818127 3481.445894342931 0.9979816403605519 1.0385963313281656 1.0102178185032693 1.0182946210911095 1.0918972517508132 1.2472146164297557 1.0295992450284086 1.2539637672892339 1.075964885293576 0.9622638598880442 1.0 11.765470887106371 -6.746834575844484 23.072534518589908 1.072426346656726 1.017434613645115 0.12640348548849545 0.08738263932501848 212.30454059056524 335390.70641251496 0.01284387636692969 0.026621424633811865 1.7912880314387375e-07 6.746834575844484 -0.0549917330116112 DYLQAQHPPS(ph)PIK ddPTM_A549_MK2206_60min_R1 2 DYLQAQHPPSPIK 13 0 Q9P219 Q9P219 CCDC88C Protein Daple 1 DYLQAQHPPS(1)PIK;DY(0.001)LQAQHPPS(0.999)PIK 79.013 0.00024426 14456900.0 2756.8 3073.7 2811.6 2456.4 3847.1000000000004 2884.2 2721.4 3055.8 4526.9 3671.2 4239.8 True False 3222.080442711081 3230.1382011658175 3210.3271577123514 3058.2181102719874 3281.1966862225545 3189.4041296229893 3215.8431536278254 3488.9690079950155 3501.5643779738384 2841.8733702408663 3186.940647472833 1.0110261843960329 1.0135545523030807 1.0073382321249262 0.9596093710427523 1.0295757119996773 1.0007729927923539 1.0090690443758064 1.0947706261055359 1.0987228082677016 0.8917245987917608 1.0 11.637956435753393 -8.042539854904202 20.858128106564354 1.0515515382559606 1.0035646117510064 0.0 0.05647314550612676 77.86540020307712 38178.66263827865 0.006546081032233531 0.008452133995030852 9.066927541989912e-09 8.042539854904202 -0.047986926504954175 DYLQAQHPPS(ph)PIK ddPTM_A549_PD325901_60min_R1 2 DYLQAQHPPSPIK 13 0 Q9P219 Q9P219 CCDC88C Protein Daple 1 DYLQAQHPPS(1)PIK;DYLQAQHPPS(1)PIK 83.41799999999999 0.00014001 24223000.0 8128.5 7428.400000000001 7698.5 8254.6 9671.3 7933.5 8356.2 8563.8 8630.099999999999 8615.7 10159.4 True False 8953.699336114572 8054.4173379720705 8220.966504841246 8764.467894443209 8992.021252173728 7868.892206343541 8674.19976368809 8392.988290828864 8267.40690898117 8071.70323163544 8909.858205742748 1.004920519424604 0.903989396013136 0.9226820803436036 0.9836820847265751 1.0092215885521076 0.8831669398814602 0.973550820157523 0.941988985348752 0.9278943298617822 0.9059294822933226 1.0 13.121186757093962 -10.922373363021652 1.1635496822556655 1.0001558281907217 0.9473835827856357 0.0 0.047235634453398054 0.6158920096171111 1.4742225503016 0.02615302087766891 0.006101975969859561 1.195712135438747e-11 10.922373363021652 -0.05277224540508596 DYNASASTIS(ph)PPSSMEEDKFSR ddPTM_A549_MK2206_60min_R1 2 DYNASASTISPPSSMEEDKFSR 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DY(0.001)NAS(0.008)AS(0.032)T(0.032)IS(0.648)PPS(0.138)S(0.138)MEEDKFS(0.002)R;DYNASAS(0.009)T(0.027)IS(0.928)PPS(0.016)S(0.019)MEEDKFS(0.001)R 60.541000000000004 0.00041719 17799900.0 4173.5 4187.7 3835.2000000000003 3775.1 5353.9 4545.0 3797.5 3983.0 6752.200000000001 5304.5 5461.2 True False 4877.884767721525 4400.836042887102 4379.089029470198 4699.999669470681 4566.348402268445 5025.948883273171 4487.456594363806 4547.602447425922 5222.837481047729 4106.209765864753 4105.03331854772 1.1882692268737114 1.0720585440812038 1.0667608980624383 1.1449358153159759 1.1123779146045834 1.2243381461886045 1.0931596033796334 1.1078113366043942 1.2723008745019069 1.0002865865452826 1.0 12.003178216362729 -5.200473668110381 20.26284571788264 1.126798862693648 1.1882737498935694 0.03550448150007601 0.08056513752169533 19817.04188655496 6583906.133734313 0.013322282386923888 21.112956406337705 6.302695589685279e-06 5.200473668110381 0.061474887199921335 DYNASASTIS(ph)PPSSMEEDKFSR ddPTM_A549_PD325901_60min_R1 3 DYNASASTISPPSSMEEDKFSR 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DYNAS(0.001)AS(0.009)T(0.011)IS(0.671)PPS(0.154)S(0.154)MEEDKFSR;DYNAS(0.001)AS(0.016)T(0.055)IS(0.892)PPS(0.016)S(0.016)MEEDKFS(0.002)R;DYNASAS(0.001)T(0.003)IS(0.64)PPS(0.158)S(0.197)MEEDKFS(0.001)R 68.444 0.0001829 30406200.0 8717.3 10261.3 8245.3 9580.900000000001 11673.0 9575.4 9218.9 8865.2 8868.599999999999 10103.2 11217.8 True False 9602.27387866292 11126.055763035485 8804.875641016759 10172.69043319736 10853.128749663845 9497.421117113747 9569.730284275643 8688.37663138514 8495.883583387256 9465.282227777101 9838.081715493136 0.9760311162633603 1.130917193492511 0.8949789090642264 1.0340115814628048 1.1031753001778997 0.9653732700915757 0.9727231955397475 0.883137270317909 0.8635711543245094 0.9621064859494971 1.0 13.264161322854768 -7.656714589917319 2.5940782913944087 0.9307716423439959 1.026360464879559 0.2845368980089771 0.06844768137342491 0.2981742182840125 4.086256490276238 0.011836045919786854 0.018202110475034654 2.204374660285009e-08 7.656714589917319 0.09558882253556311 DYNPYNYSDSIS(ph)PFNK ddPTM_A549_MK2206_60min_R1 2 DYNPYNYSDSISPFNK 16 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;H7C5M8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 DYNPYNYSDS(0.008)IS(0.992)PFNK;DYNPYNYS(0.001)DS(0.029)IS(0.97)PFNK 111.22 4.0532e-07 7632500.0 2704.3 2406.8 2304.72 2101.6 3082.9 2314.26 2131.61 2440.71 3082.8 3123.2 3261.8 True False 3160.7197262128448 2529.295839726027 2631.563951814911 2616.4920943444076 2629.409493892936 2559.1534571185425 2518.8959449932413 2786.6881168608925 2384.5507222200094 2417.6669508433947 2451.805038899685 1.289139909603622 1.031605612843148 1.0733169685448962 1.0671697189751395 1.0724382453643035 1.0437834234434207 1.0273638829470981 1.1365863405319925 0.9725694679582445 0.986076344768583 1.0 11.259628548929282 -2.0000000000000004 0.4211848983362144 1.0024076061640095 5.126554189736485 0.5379407367340128 0.05703835298853971 36.383212297221526 0.40919029880758573 0.012263837275470809 127.9531969779448 0.00999999999999999 2.0000000000000004 4.124146583572475 DYNPYNYSDSISPFNKS(ph)ALK ddPTM_A549_PD325901_60min_R1 2 DYNPYNYSDSISPFNKSALK 20 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;H7C5M8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 DYNPYNYS(0.003)DS(0.019)IS(0.022)PFNKS(0.956)ALK;DYNPYNYS(0.001)DS(0.059)IS(0.373)PFNKS(0.567)ALK 78.236 7.6018e-05 8643200.0 3566.9 3776.0 3503.1 3593.5 4507.9 4592.299999999999 4738.5 4671.6 4636.3 4796.6 4380.1 True False 3929.009062187003 4094.2167718731507 3740.8414318515765 3815.462333569364 4191.280655410745 4554.901831372211 4918.826210506692 4578.421273200696 4441.452434167553 4493.7418574071235 3841.375467741583 1.0228130770296562 1.0658205130570633 0.9738286359315164 0.9932542042844216 1.0910885151965832 1.1857476233767181 1.280485662443865 1.1918702849144909 1.156214088277803 1.1698262497753387 1.0 11.907407268831752 -6.856230571780245 5.537004340185281 1.1105391194842242 1.015087574706201 0.3664107320668719 0.07621055349926406 0.2919366613224546 13.852825317935588 0.01431424425689537 0.027489636475056367 1.3924173567806723e-07 6.856230571780245 -0.09545154477802331 DYNVTANSK ddPTM_A549_MK2206_60min_R1 2 DYNVTANSK 9 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 174.41 3.1109e-07 23066000.0 6447.299999999999 7013.1 6946.3 6204.5 8974.7 6799.9 7141.1 7206.0 10641.6 9990.6 10306.4 False True 7535.446618648847 7370.036834627964 7931.389790730292 7724.6027785305905 7654.533518713197 7519.460904591689 8438.545434104382 8227.472567449466 8231.294591143262 7733.716521226954 7747.036437830558 0.9726876437358073 0.9513362811407963 1.0237966291212333 0.9971042269543979 0.9880595735079226 0.9706241818965037 1.0892611002701662 1.062015473074688 1.0625088260780549 0.9982806436099152 1.0 12.919428810000964 -7.730010686692871 24.997991771847623 1.037295570820232 0.985051002005496 0.4785054934148708 0.03017156504032585 169.80329242674242 135059.01834755117 0.0052323386669016194 0.007760469590079716 1.8620413168117647e-08 7.730010686692871 -0.05224456881473605 DYPFHEEF ddPTM_A549_MK2206_60min_R1 1 DYPFHEEF 8 0 P15121 P15121 AKR1B1 Aldose reductase 0 71.029 0.017502 1309100.0 299.65 501.14 546.38 545.77 747.99 485.73 366.06 485.17 637.37 601.41 654.43 False True 350.22359426087314 526.6458854579943 623.8648998544861 679.483674500546 637.9616618563612 537.1296261985208 432.56836364261113 553.9443332708101 493.0067126707429 465.551063302615 491.91696965084327 0.7119567241387457 1.0705991416230287 1.2682321170934556 1.3812974880350954 1.2968889085269384 1.0919111543961757 0.8793523914201271 1.1260931568674957 1.002215298692934 0.9464017141613502 1.0 8.942271014319264 -7.526323705288689 24.57093076988006 1.0033384437354862 1.1647926028264808 0.15229546249345893 0.17126580409719386 116.85864459334618 833482.3141160917 0.02624082285051746 0.039032470222946425 2.976297192651258e-08 7.526323705288689 0.1614541590909946 DYPFHEEF ddPTM_A549_PD325901_60min_R1 1 DYPFHEEF 8 0 P15121 P15121 AKR1B1 Aldose reductase 0 99.171 0.0066932 2993000.0 347.67 334.44 397.83 455.12 471.72 444.45 567.14 515.12 474.35 430.6 573.86 False True 382.9652024588736 362.62443251728195 424.82913614613165 483.23172874748576 438.5880145456551 440.8305465569279 588.7228230509162 504.84552749617757 454.4147190965594 403.41184251334437 503.2788579982609 0.7609403740544113 0.7205238740995057 0.8441227549987798 0.9601669552929155 0.8714612338179536 0.8759170776819145 1.169774596517922 1.0031129253156947 0.9029084211960472 0.8015672347490869 1.0 8.975214183393932 -6.047055572990964 1.1063860947715745 0.9662623266955274 0.7131465800636623 0.4205122090294904 0.09260443635686896 0.40757598983600524 0.7852821414676905 0.012571331226256753 0.08622173998038031 8.973139654766606e-07 6.047055572990964 -0.2531157466318651 DYQDDTLELYNREDRFS(ph)APPSR ddPTM_A549_MK2206_60min_R1 2 DYQDDTLELYNREDRFSAPPSR 22 2 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 DYQDDTLELYNREDRFS(0.999)APPS(0.001)R;DYQDDTLELYNREDRFS(0.999)APPS(0.001)R 121.23 6.7931e-16 8968600.0 660.22 589.38 691.81 813.39 1010.8900000000001 774.44 562.29 828.6500000000001 1079.28 735.78 1009.52 True False 771.6489951707451 619.3769245544813 789.9190606690069 1012.6705865144648 862.1894201178854 856.3907267683329 664.4508146003484 946.1136751341938 834.824803256004 569.5667869785967 758.8283226654023 1.0168953531680394 0.816228000529692 1.0409720315846904 1.3345186997731393 1.1362114385628423 1.1285697979224607 0.8756273253829658 1.246808595402643 1.100149768163189 0.750587148589789 1.0 9.567629716977407 -5.953484501184472 10.478964831565083 1.0815478564202408 0.9191346550140422 0.12012850520008767 0.1582826576209478 0.5664394184008006 123.6258387370353 0.017001002062801748 0.052918608473429295 1.1130521139640182e-06 5.953484501184472 -0.16241320140619853 DYQYS(ph)DQGIDY ddPTM_A549_MK2206_60min_R1 2 DYQYSDQGIDY 11 0 Q15417-3;Q15417-2;Q15417 Q15417-3 CNN3 Calponin-3 1 DYQYS(1)DQGIDY;DYQYS(0.999)DQGIDY 65.574 0.0056059 4095900.0 126.02 552.6700000000001 423.27 332.92600000000004 596.02 406.70000000000005 231.12 425.33000000000004 400.61 641.35 632.69 True False 147.28909510680873 580.7985423555688 483.29605066328986 414.4928849456163 508.3462475429196 449.73672405438936 273.11151233426284 485.6218300184959 309.87247464271354 496.4685895630799 475.57561164431917 0.309706998215387 1.2212538408928029 1.016233883382449 0.8715604307640856 1.0689073095764832 0.945668181973018 0.5742756896005881 1.0211243346550964 0.6515735186068914 1.0439319792840565 1.0 8.89353092281045 DYQYS(ph)DQGIDY ddPTM_A549_PD325901_60min_R1 2 DYQYSDQGIDY 11 0 Q15417-3;Q15417-2;Q15417 Q15417-3 CNN3 Calponin-3 1 DYQYS(1)DQGIDY;DYQYS(1)DQGIDY 72.652 0.0018708 5119500.0 417.04999999999995 458.19 423.18 604.37 447.34000000000003 482.46000000000004 358.21000000000004 516.49 410.09000000000003 149.77 545.14 True False 459.38860898401697 496.80327931794494 451.89953958806507 641.7005622761419 415.92038163922103 478.5310057191032 371.8418775700332 506.18820177143306 392.85534342638977 140.3134966400919 478.09123592718066 0.9608806321101181 1.0391390638116913 0.9452161128025678 1.3422136070569615 0.8699602719815825 1.0009198449142656 0.7777634259471542 1.0587690460164216 0.8217162623040147 0.29348686212157094 1.0 8.901142149109603 DYRQS(ph)SGASSSSFSSSR ddPTM_A549_MK2206_60min_R1 2 DYRQSSGASSSSFSSSR 17 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 DYRQS(0.5)S(0.5)GASSSSFSSSR;DY(0.002)RQS(0.963)S(0.032)GAS(0.002)SSSFSSSR 150.91 2.4818e-17 28105000.0 2427.3 2628.1000000000004 2317.0 2135.3 3038.4 1817.55 1681.9899999999998 2013.3200000000002 3297.7 4796.299999999999 3571.0 True False 2836.968898212641 2761.8590644773003 2645.585440467887 2658.4485958572595 2591.455384944143 2009.8819346079538 1987.5858109687895 2298.714275533909 2550.77621534479 3712.8124988249792 2684.2221454138135 1.0569054066779853 1.0289234328820867 0.9856059957586074 0.9903981309443446 0.9654399839342027 0.748776303050022 0.7404699400028134 0.8563800427104842 0.9502850647823522 1.3831986689956293 1.0 11.390288358146812 -6.24051735790347 1.537511285521129 0.9317361223393874 1.0406408517649115 0.03577337558058402 0.161660256152206 0.6719850955292364 2.945028310160576 0.01577071507119146 0.062187029374057234 5.747548465561294e-07 6.24051735790347 0.1089047294255241 DYRQS(ph)SGASSSSFSSSR ddPTM_A549_PD325901_60min_R1 2 DYRQSSGASSSSFSSSR 17 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 DYRQS(0.964)S(0.036)GASSSSFSSSR;DYRQS(0.725)S(0.274)GASSSSFSSSR 165.53 1.9585999999999998e-23 43058000.0 11273.4 9637.5 10737.5 9757.9 11249.1 10777.8 10347.099999999999 11068.4 11086.5 12045.8 13350.9 True False 12417.867268961547 10449.685947809188 11466.21131983281 10360.623321201198 10459.002023288236 10690.029170168202 10740.86455265038 10847.63207900817 10620.572959342271 11285.226132250908 11708.823938328129 1.0605563235358255 0.8924624712822585 0.9792795058006516 0.8848560176301159 0.8932581169874221 0.9129891461750514 0.9173307762781203 0.9264493288261941 0.9070571916771646 0.9638223438742981 1.0 13.515308555000097 -10.834513355051149 1.0339007379340608 1.0008144752975079 0.9261185029224022 0.12229988882327858 0.04912241071149369 0.5906536328632654 1.1006831457839041 0.03264841775226433 0.00768049511978146 1.4638165228291905e-11 10.834513355051149 -0.07469597237510572 DYS(ph)PSRNPPEVEAR ddPTM_A549_MK2206_60min_R1 3 DYSPSRNPPEVEAR 14 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 DYS(0.902)PS(0.098)RNPPEVEAR;DYS(0.943)PS(0.057)RNPPEVEAR;DY(0.002)S(0.946)PS(0.052)RNPPEVEAR 95.015 1.4394000000000001e-05 26141200.0 2453.8199999999997 2885.75 2187.04 2547.13 3259.8999999999996 2427.13 2107.24 2614.75 3842.92 3630.0 3233.1800000000003 True False 2867.9648258608895 3032.6223489651743 2497.195158274013 3171.1769643450098 2780.373028363416 2683.9672856015004 2490.0982314436296 2985.3988198360366 2972.5047558822216 2809.9804788555084 2430.292174771502 1.180090548631478 1.2478426999215861 1.0275287820110772 1.304854205294541 1.144048874956703 1.10438049937508 1.0246085871044501 1.2284114851814993 1.2231059239458313 1.1562315461595498 1.0 11.246914052713288 -10.895558186185989 1.119098705806911 0.9989898145647427 1.1674008975570878 0.023414489845710262 0.09484403371395314 0.44874536290486905 0.9883865263238916 0.059201695630437895 0.013815850229600083 1.2718673356084174e-11 10.895558186185989 0.16841108299234508 DYS(ph)PSRNPPEVEAR ddPTM_A549_PD325901_60min_R1 3 DYSPSRNPPEVEAR 14 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 DY(0.003)S(0.981)PS(0.016)RNPPEVEAR;DYS(0.821)PS(0.179)RNPPEVEAR;DY(0.003)S(0.933)PS(0.065)RNPPEVEAR 84.14 7.3347e-05 57673100.0 6557.36 6264.6 6527.77 6665.18 7885.64 7872.9 6958.93 7469.9400000000005 8665.74 7753.9400000000005 8040.98 True False 7223.0583599267065 6792.539827615609 6970.783726869852 7076.873030877936 7331.7798503811555 7808.78571265168 7223.75588922261 7320.946186645436 8301.549083722603 7264.354905104317 7051.990435971944 1.0242581049290922 0.9632088825542238 0.988484569024958 1.0035284498939572 1.039675240196302 1.1073165489305474 1.0243570173286816 1.0381389840379758 1.177192334433227 1.0301141175758137 1.0 12.783814802714225 -6.887489471071022 2.5174469226308798 1.0784325287182794 0.9902892606583324 0.270510015314008 0.04835243945884644 0.30222352375483913 3.886608827333142 0.009895940241131322 0.020498293577579603 1.2957181102085341e-07 6.887489471071022 -0.08814326805994699 DYS(ph)YER ddPTM_A549_MK2206_60min_R1 2 DYSYER 6 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 DYS(1)YER;DYS(1)YER 104.75 0.029158999999999997 485410000.0 13502.4 14444.3 12140.3 11976.3 17269.8 12667.599999999999 12617.3 12570.5 18538.1 17386.2 18935.9 True False 15781.275018014401 15179.453173406453 13861.97709232297 14910.494037636538 14729.435297165717 14008.077023927668 14909.700089023432 14352.406870541696 14339.249949262605 13458.645344759685 14233.593425746674 1.1087344246793067 1.0664526321195071 0.9738916012065161 1.0475565510158131 1.0348360288640908 0.9841560458365295 1.0475007711021007 1.008347396278729 1.0074230393095824 0.9455549938931647 1.0 13.797012311480138 -5.563736433448176 4.932594039294978 1.0091449124926961 1.1002209283161857 0.5457293769881408 0.029736761499594918 0.07027805717325622 3.9138180364963353 0.00295681581638793 0.013045335906732335 2.7306344595433097e-06 5.563736433448176 0.09107601582348956 DYS(ph)YER ddPTM_A549_PD325901_60min_R1 2 DYSYER 6 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 DYS(1)YER;DYS(1)YER 83.265 0.041194999999999996 625940000.0 15007.900000000001 14639.0 14444.900000000001 15022.400000000001 15705.199999999999 14562.8 14975.300000000001 15939.3 16345.3 16858.4 16182.599999999999 True False 16531.49095976796 15872.679905574974 15425.217778240087 15950.29952965422 14602.12093199869 14444.205385080959 15545.193236298588 15621.378157361038 15658.36388331188 15793.957746927459 14192.24278995341 1.1648258280552026 1.1184053246898462 1.0868766837303185 1.1238744831046243 1.0288804347636604 1.0177535431754248 1.0953302776995135 1.100698345466532 1.1033043976950794 1.1128584805572725 1.0 13.792814975027223 -14.99999999998949 0.2365037853712599 0.4637341599903596 1.1034970839893905 0.0 0.05146100387543576 32.91186908676424 0.4160599366191615 8.25190560865453 0.023968341288805737 1.0000000000242017e-15 14.99999999998949 0.6397629239990309 DYSEADGLS(ph)ER ddPTM_A549_MK2206_60min_R1 2 DYSEADGLSER 11 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q4VXN7;Q4VXN6;Q4VXN5;Q9H4G0-3;Q9H4G0-2;Q4VXN2;Q4VXN1;Q4VXN0;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 DYSEADGLS(1)ER;DYSEADGLS(1)ER 178.95 8.4724e-16 63358000.0 3584.1000000000004 3595.9 3035.8999999999996 3239.2 5026.1 3965.8 3710.5 4231.4 5757.6 4499.8 4355.1 True False 4189.008457168014 3778.915950669279 3466.4362704861724 4032.8041454132135 4286.767348034411 4385.458323715015 4384.649820510048 4831.213908119022 4453.5127929979 3483.2920547531758 3273.6084753547166 1.279630257773605 1.1543579444880956 1.0589037438603777 1.2319140104181925 1.3094929892524525 1.3396404477599668 1.3393934716139024 1.4758068793170291 1.360429271406787 1.064052735987537 1.0 11.676666069992494 -10.81547273301568 1.112255210671031 1.0031783111086348 1.2851100222226668 0.45344984181576387 0.10573406713605281 0.36838116444619834 0.8232122532374646 0.07814289031708914 0.020306840324961425 1.5294217674643458e-11 10.81547273301568 0.28193171111403204 DYSEADGLS(ph)ER ddPTM_A549_PD325901_60min_R1 2 DYSEADGLSER 11 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q4VXN7;Q4VXN6;Q4VXN5;Q9H4G0-3;Q9H4G0-2;Q4VXN2;Q4VXN1;Q4VXN0;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 DYSEADGLS(1)ER;DYSEADGLS(1)ER 157.03 3.2527e-13 76156000.0 3695.7 3374.3 3288.1 3373.3 3822.8 3080.2 3610.1000000000004 3371.0 4085.0 3714.8999999999996 3841.1 True False 4070.884743369453 3658.664103106878 3511.2502389515507 3581.6610796798486 3554.2997159440542 3055.1158724370543 3747.4843310225197 3303.7627605016582 3913.3216559701614 3480.340580011198 3368.6690507390676 1.2084549363720736 1.0860859431424963 1.0423256740466094 1.0632273535134156 1.0551050466546306 0.9069207530988473 1.1124525070814961 0.9807323636546696 1.1616818384434648 1.0331500445992552 1.0 11.71796298492041 -5.2758496453767965 3.08888473112664 1.0585495237949818 1.22920652164169 0.3303814216496598 0.06536425910742001 0.3759877139085489 5.464924024062225 0.010260162763140537 0.1529638213788499 5.298468474066406e-06 5.2758496453767965 0.1706569978467083 DYSPS(ph)RNPPEVEAR ddPTM_A549_PD325901_60min_R1 1 DYSPSRNPPEVEAR 14 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 DYS(0.417)PS(0.583)RNPPEVEAR 84.874 5.94e-05 3678000.0 426.75 350.26 259.93 356.19 330.24 434.66 131.13 191.63 246.0 391.17 382.59 True False 470.0733458432542 379.7776394375771 277.57041288606666 378.1910473338174 307.04508166615153 431.1202730710637 136.12022390708933 187.80778931917322 235.66147548804383 366.47145944251037 335.5338554378328 1.4009714317199464 1.1318608637629466 0.8272500923159287 1.1271323033567562 0.9150941900199409 1.2848786078784857 0.40568253158677 0.559728284569394 0.7023478306847245 1.092204120398842 1.0 8.390314531783037 -7.732732462728564 24.999972727606483 0.7976866227804611 1.093768115896453 0.3718698886388796 0.23031013974036826 221.7503633848281 193115.1855816439 0.03622905256871558 0.05373112794280155 1.850408169954717e-08 7.732732462728564 0.29608149311599186 DYSSGGS(ph)SR ddPTM_A549_MK2206_60min_R1 1 DYSSGGSSR 9 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DYSS(0.001)GGS(0.971)S(0.029)R 83.869 0.0013988 4257000.0 568.46 754.64 556.46 792.25 913.81 726.02 669.95 675.13 1296.1 1199.0 969.17 True False 664.4021504873552 793.0479526719498 635.3743954263106 986.3512855654535 779.3897595167875 802.8469545069279 791.6712430267368 770.8317449989119 1002.5354194463965 928.1450672583347 728.4983412687488 0.9120160099887612 1.0886063944782383 0.8721699960493333 1.3539513128439378 1.069857974088735 1.1020573541851775 1.0867166034283158 1.0581105011940526 1.3761670585280759 1.2740524098406074 1.0 9.50878187716942 -6.243053102641096 24.98302282939221 1.1624969831210221 0.9706983653818685 0.34526927471745616 0.12688129161231151 939.2916502058774 1276295.074492084 0.021293983929435975 0.05622545761727057 5.714087643364788e-07 6.243053102641096 -0.19179861773915363 DYSSGGS(ph)SR ddPTM_A549_PD325901_60min_R1 1 DYSSGGSSR 9 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DYSSGGS(0.739)S(0.261)R 111.61 0.00031331 8097300.0 1517.9 1516.2 1424.8 1202.1 1515.6 1414.3 1434.7 1543.1 1264.0 1365.1 1602.9 True False 1671.9960905810785 1643.9754951043624 1521.49549601842 1276.3509868328179 1409.1494845361535 1402.7824097096711 1489.2982935979635 1512.3216599614686 1210.8784756784034 1278.9073530305764 1405.7534616202777 1.1893949659237748 1.169462170990857 1.0823345185042172 0.907947959353904 1.0024158026343835 0.9978865057126147 1.0594306428962244 1.0758085974893208 0.861373283963135 0.9097664618634494 1.0 10.457127884132843 -4.721899064236163 0.5112140411373617 0.951103428735946 1.5807568572692954 0.5345835575263996 0.0683885765980496 3.863069932435259 0.4549076339540245 0.015158606086236832 1.6457737104727947 1.897146791905707e-05 4.721899064236163 0.6296534285333494 DYSSGGSSRT(ph)LDAQDR ddPTM_A549_MK2206_60min_R1 2 DYSSGGSSRTLDAQDR 16 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DYS(0.017)S(0.017)GGS(0.016)S(0.043)RT(0.906)LDAQDR;DYS(0.003)S(0.003)GGS(0.016)S(0.076)RT(0.903)LDAQDR 65.887 0.0010606 6852100.0 797.6500000000001 971.24 766.23 596.12 1289.3899999999999 1055.58 727.37 619.8 1125.3899999999999 1541.15 1825.77 True False 932.2738193298362 1020.6719674985487 874.8929357141608 742.1694267608436 1099.7224390446047 1167.2807749627043 859.5237137702178 707.6585480578925 870.4909618785437 1193.00314462484 1372.3809203114463 0.6793112652121885 0.7437235190262764 0.6375000721487835 0.5407896712761182 0.8013244885356138 0.850551590806001 0.626301124599691 0.5156429513005015 0.6342925269472528 0.8692944699013313 1.0 10.422465258570758 -10.67223448708095 0.9247763198978787 1.0012613193676339 0.6708430668207146 0.48482254351378484 0.10227244728963655 0.3243362724577059 0.49114649606149774 0.07116093693606969 0.018620132345362837 2.1269903175497547e-11 10.67223448708095 -0.33041825254691926 DYSSGGSSRT(ph)LDAQDR ddPTM_A549_PD325901_60min_R1 2 DYSSGGSSRTLDAQDR 16 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DYS(0.024)S(0.024)GGS(0.123)S(0.02)RT(0.809)LDAQDR;DYS(0.001)S(0.001)GGS(0.004)S(0.004)RT(0.991)LDAQDR 80.752 0.00010849 9216500.0 933.3499999999999 1083.85 1256.43 1304.7 1294.43 1279.42 1175.8899999999999 1196.49 1339.3600000000001 1081.95 1646.29 True False 1028.1030049040448 1175.1898432719063 1341.6988953273608 1385.2883558113117 1203.513702341075 1269.0008277103489 1220.6391374216985 1172.6250683217538 1283.071356949864 1013.635492353258 1443.8067666921495 0.7120779792849236 0.8139523033018738 0.9292787139384835 0.9594693609762565 0.8335697893274177 0.878927053803542 0.8454310961696475 0.8121759056499717 0.8886724917417167 0.7020575853620353 1.0 10.49566195528792 -14.999999999259382 0.15843938437347038 1.563702555509584 0.8166203862019221 0.0 0.10983029318219227 41.12869895298962 0.42166116800222125 7.142453849129969 0.10621836915394521 1.0000000017053365e-15 14.999999999259382 -0.7470821693076619 DYT(ph)VPLCR ddPTM_A549_PD325901_60min_R1 1 DYTVPLCR 8 0 Q5TCX8;Q5TCX8-3 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 DY(0.001)T(0.999)VPLCR 56.563 0.019625999999999998 1767800.0 1049.0 1200.1 1399.0 1092.3 1486.7 1177.7 1292.2 1345.0 1313.2 1345.8 1431.4 True False 1155.4937077670156 1301.2366387513155 1493.9445528704175 1159.7688902067107 1382.279320836566 1168.1092016651899 1341.375378118972 1318.1729198679122 1258.0107707760126 1260.8259583243348 1255.3468743922049 0.9204577088117301 1.0365554455865664 1.1900651392418795 0.9238632874027191 1.101113444446036 0.9305071175891106 1.068529667362592 1.0500467613830844 1.0021220400816289 1.0043645975816706 1.0 10.293870345905647 -8.83758785698858 10.2726191166075 1.0009657186517422 1.030458326363561 0.020090967381497737 0.07734404852512108 1.2459467558159716 159.8093228628467 0.012413609944404937 0.013206098779956096 1.4534903174003104e-09 8.83758785698858 0.02949260771181872 DYTGCSTSESLS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 DYTGCSTSESLSPVK 15 0 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DYTGCSTSES(0.024)LS(0.976)PVK;DYTGCSTSES(0.006)LS(0.994)PVK 192.4 5.2658e-34 44688000.0 5399.1 6233.799999999999 4702.3 4626.200000000001 6227.5 5131.3 5718.0 5060.1 7703.3 7023.799999999999 7357.7 True False 6310.3360846783935 6551.073793287394 5369.156847955181 5759.619207678013 5311.442999519363 5674.29076011873 6756.886585009153 5777.3846709063355 5958.514849642337 5437.118701759043 5530.580027810474 1.1409899238320254 1.1845183977711877 0.9708126129549561 1.0414132294833123 0.9603772068771842 1.0259847487217628 1.221731997554001 1.044625453723625 1.077376119625789 0.983100990206911 1.0 12.43321507784607 DYTGCSTSESLS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 DYTGCSTSESLSPVK 15 0 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DYTGCSTSES(0.005)LS(0.995)PVK;DYTGCSTSES(0.015)LS(0.985)PVK 205.27 4.4943999999999994e-39 95552000.0 9640.7 10289.400000000001 9408.0 8967.2 10009.3 9556.4 10907.2 10351.599999999999 8239.2 9181.1 11034.0 True False 10619.416766891763 11156.523848652441 10046.483454899839 9521.083578011188 9306.281298210428 9478.575846814318 11322.279464648853 10145.12921732689 7892.935076589799 8601.403779143671 9676.887950288941 1.0973999927915543 1.1529041057377667 1.0381936327577155 0.9838993307478464 0.9617018762661763 0.9795066239793856 1.1700331266428254 1.0483875879769764 0.8156480799546847 0.8888605327797396 1.0 13.240327441609368 -8.68795097797965 11.132954814816305 0.9129704681372874 1.052882943288965 0.44801084912770206 0.07509096183347697 0.43391610572744116 63.67347988868675 0.015652248326747914 0.017745604134929267 2.051393721692225e-09 8.68795097797965 0.1399124751516776 DYTGCSTSESLS(ph)PVKQAPR ddPTM_A549_PD325901_60min_R1 1 DYTGCSTSESLSPVKQAPR 19 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DYTGCSTSES(0.018)LS(0.982)PVKQAPR 161.66 2.7219e-27 47582000.0 7528.7 7967.4 8915.0 7911.7 8136.7 9815.6 8820.1 9295.2 7426.9 7451.3 9013.8 True False 8293.008081663987 8638.840759592737 9520.025510250014 8400.38774022561 7565.206262091135 9735.665007951804 9155.753732043917 9109.79994405667 7114.773220740455 6980.8236463531875 7905.159743186012 1.0490626819796132 1.0928103972900907 1.2042799664429253 1.062646172010182 0.9569960010753855 1.231558289045788 1.1581997112627453 1.1523865728215066 0.900016375617603 0.883071800335272 1.0 12.948578900740198 -8.758263450361465 24.998427494877262 0.9527855078903469 1.114343670925786 0.5220201278436927 0.07817721750183404 53.262581228168784 419240.78291115735 0.01363953560703711 0.015150104697896754 1.7447634288940972e-09 8.758263450361465 0.16155816303543902 DYVKFS(ph)DEEEFMNEDEKEMK ddPTM_A549_PD325901_60min_R1 1 DYVKFSDEEEFMNEDEKEMK 20 2 H0YA93;Q86UW6-2;Q86UW6 H0YA93 N4BP2 NEDD4-binding protein 2 1 DYVKFS(1)DEEEFMNEDEKEMK 56.625 0.021709 7620700.0 3161.4 3045.8 2777.9 3529.2 3782.8 3154.7 3335.1 3658.8 3349.0 2959.0 3585.6 True False 3482.3430007003244 3302.4802552360316 2966.424998869715 3747.190668605258 3517.109177951544 3129.009169137451 3462.0190555367453 3585.8223637269266 3208.2531764612163 2772.168235013901 3144.5939309911196 1.1074062588433327 1.0502088116016777 0.9433411957055935 1.1916294284216884 1.118462114707133 0.9950439509215879 1.1009431206418372 1.1403133257961673 1.0202440273266165 0.8815663630503043 1.0 11.618658015099305 -8.957224713955918 16.564047959497206 1.0089296162031662 1.0781970002153387 0.2712646916989996 0.07501647907742366 5.464866899287678 2115.798336374916 0.011046770348809576 0.011727783755757032 1.103507491994814e-09 8.957224713955918 0.06926738401217247 EAAAAALK ddPTM_A549_PD325901_60min_R1 2 EAAAAALK 8 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 126.67 0.0029675 21530300.0 11893.6 11807.4 11275.1 12346.4 14726.3 11677.0 13241.5 13948.2 12948.5 13693.099999999999 13503.1 False True 13101.02951639444 12802.4510360739 12040.296088684227 13109.00908729116 13691.97549097702 11581.906383497017 13745.412528526833 13669.992208848778 12404.319574621695 12828.515329120934 11842.304303203426 1.1062905648228039 1.081077694702605 1.0167190253190204 1.1069643839286483 1.1561918306113148 0.9780112119196287 1.1607042157165817 1.1543354957658831 1.047458269693867 1.083278642455652 1.0 13.531662210799073 -9.16613543437337 2.4265306525552854 1.0169133497578684 1.092527355748138 0.08995635457449924 0.05833184720183618 0.254526386932902 3.1061014741957753 0.010707898551874871 0.01015023373390841 6.821259405620259e-10 9.16613543437337 0.07561400599026968 EAAAAALKK ddPTM_A549_MK2206_60min_R1 2 EAAAAALKK 9 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 109.29 4.9902e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAAAAALKK ddPTM_A549_PD325901_60min_R1 2 EAAAAALKK 9 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 139.96 1.781e-13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEK ddPTM_A549_MK2206_60min_R1 1 EAAAAPTVAPGPAQPGHVSPTPATTSPGEK 30 0 M0QXQ4 M0QXQ4 NUMBL 1 EAAAAPTVAPGPAQPGHVS(0.975)PT(0.022)PAT(0.003)T(0.001)SPGEK 173.05 7.1257e-58 14671000.0 1953.8 1614.8 1426.7 1495.3 2107.2 1584.9 1608.7 1513.5 2691.6 2659.0 2165.1 True False 2283.553674176184 1696.986422631539 1629.0275131271194 1861.6485671265689 1797.2336713909615 1752.613066028526 1900.979966649916 1728.0432598993568 2081.9568976019764 2058.3300532442977 1627.4459162798769 1.403151804513468 1.0427298416838469 1.0009718275928075 1.1439081007263503 1.1043277404260516 1.0769101747078418 1.1680756623822568 1.0618130179400567 1.279278700923623 1.2647609562039175 1.0 10.66839388482025 -5.252255939224924 24.370130841929953 1.1153005036957897 1.403152020696132 0.4603501606527317 0.08990792359071634 684.758421575535 1817090.2353390763 0.014234167802065994 0.23810960569672232 5.594278212960729e-06 5.252255939224924 0.2878515170003424 EAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEKGEAGTPVAAGTTAAAIPR ddPTM_A549_MK2206_60min_R1 1 EAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR 48 1 M0QXQ4 M0QXQ4 NUMBL 1 EAAAAPTVAPGPAQPGHVS(0.955)PT(0.039)PAT(0.002)T(0.002)S(0.002)PGEKGEAGTPVAAGTTAAAIPR 111.94 1.0994000000000001e-18 12313000.0 652.45 781.85 731.52 334.93 722.81 577.03 459.27 421.44 695.65 922.92 787.89 True False 762.5676091290061 821.6428254486432 835.2605357838025 416.98786503557903 616.4856065006169 638.090931598486 542.7134141128282 481.18041060587007 538.0863857247787 714.4317310042218 592.2351683422257 1.28760946646173 1.3873590583088324 1.4103528132614096 0.7040916975646754 1.0409473119036017 1.0774283016400714 0.9163816050167741 0.812481994192918 0.9085687822811681 1.2063311488307027 1.0 9.210026353519586 -6.244127688542448 24.999192624846323 0.9438476781931023 1.3643323582175026 0.6569661436833425 0.12954332438099742 285.11353367346476 411721.6357971098 0.014063239382055837 0.03711206338032516 5.699966607950875e-07 6.244127688542448 0.4204846800244003 EAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEKGEAGTPVAAGTTAAAIPR ddPTM_A549_PD325901_60min_R1 2 EAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR 48 1 M0QXQ4 M0QXQ4 NUMBL 1 EAAAAPTVAPGPAQPGHVS(0.449)PT(0.449)PAT(0.083)T(0.016)S(0.003)PGEKGEAGTPVAAGTTAAAIPR;EAAAAPTVAPGPAQPGHVS(0.964)PT(0.034)PAT(0.001)TSPGEKGEAGTPVAAGTTAAAIPR 162.05 2.9225000000000003e-55 56084000.0 1471.19 1583.9 1411.85 1760.98 2086.1000000000004 2063.8 1865.62 2096.38 1900.47 2431.74 2224.1 True False 1620.5441257671641 1717.3808116975326 1507.6666311437432 1869.7517351242461 1939.579532654309 2046.9930970507087 1936.6171900064364 2054.5660563217048 1820.5998549624503 2278.1995213966547 1950.5497997315244 0.8308140227899936 0.8804598641541552 0.7729444443567962 0.9585767742928689 0.994375807744706 1.0494441604784757 0.9928570858703502 1.0533266346773085 0.9333777867209745 1.1679781370925408 1.0 10.929665117122767 -6.385520231383826 5.53710275432851 0.9836700802352472 0.83409850594253 0.5723872994267836 0.06887865999485834 0.09727228463156934 3.996812803213389 0.006387918544197893 0.015060129359920705 4.116041724886467e-07 6.385520231383826 -0.14957157429271717 EAAAQEAGADTPGKGEPPAPKS(ph)PPK ddPTM_A549_MK2206_60min_R1 4 EAAAQEAGADTPGKGEPPAPKSPPK 25 2 O95466-2;O95466;O95466-3;K7EK60;K7ERL1;K7EJE6 O95466-2 FMNL1 Formin-like protein 1 1 EAAAQEAGADTPGKGEPPAPKS(1)PPK;EAAAQEAGADTPGKGEPPAPKS(1)PPK;EAAAQEAGADTPGKGEPPAPKS(1)PPK;EAAAQEAGADTPGKGEPPAPKS(1)PPK 167.88 2.4083999999999996e-48 162803000.0 10950.550000000001 10005.2 8960.18 10321.05 13910.8 11908.82 9789.93 10048.4 14818.400000000001 15397.8 16057.600000000002 True False 12798.735124756902 10514.421944335565 10230.8682572169 12849.707713329535 11864.539747525328 13169.003427965064 11568.633558093497 11472.791471934379 11462.056060122284 11919.426285763468 12070.054752785449 1.060370925144585 0.8711163420289469 0.8476240138725043 1.0645939870624168 0.9829731505391314 1.0910475302463734 0.9584574216967626 0.9505169369084066 0.9496275116297336 0.987520481877912 1.0 13.559144600082556 -6.258599296571329 24.99796367936709 0.9860545944889081 0.9208450258716763 0.17186869647027658 0.06609309797244453 346.5148048217766 3049952.7490684222 0.00896166219887151 0.022624216865316356 5.51316135708021e-07 6.258599296571329 -0.06520956861723182 EAAAQEAGADTPGKGEPPAPKS(ph)PPKAR ddPTM_A549_MK2206_60min_R1 2 EAAAQEAGADTPGKGEPPAPKSPPKAR 27 3 O95466-2;O95466;O95466-3;K7EK60;K7ERL1;K7EJE6 O95466-2 FMNL1 Formin-like protein 1 1 EAAAQEAGADT(0.003)PGKGEPPAPKS(0.997)PPKAR;EAAAQEAGADT(0.009)PGKGEPPAPKS(0.991)PPKAR 98.398 2.7135000000000005e-10 33475000.0 2152.16 2183.8900000000003 1749.79 2007.28 2460.2 1816.69 1858.7 1927.77 3213.92 2654.0 2745.95 True False 2515.3919927398 2295.0406728516186 1997.9365333950386 2499.063690110222 2098.307839007234 2008.9309299787753 2196.4017305975012 2201.037301048023 2485.972251575622 2054.4595567169476 2064.0548306354117 1.2186652967767557 1.1119087723774754 0.967966792229052 1.2107545075926567 1.0165950089423146 0.9732933932575489 1.0641198567003896 1.0663657129546513 1.204411924856824 0.9953512504725903 1.0 11.011265580440265 -11.238556036577945 1.7259882495566778 0.999956278456311 1.1051242754316464 0.14033516436406035 0.0859606314059682 0.5802945037621541 3.1187198198958956 0.06760947523188872 0.013864475268018397 5.773563721987059e-12 11.238556036577945 0.10516799697533541 EAAAQEAGADTPGKGEPPAPKS(ph)PPKAR ddPTM_A549_PD325901_60min_R1 2 EAAAQEAGADTPGKGEPPAPKSPPKAR 27 3 O95466-2;O95466;O95466-3;K7EK60;K7ERL1;K7EJE6 O95466-2 FMNL1 Formin-like protein 1 1 EAAAQEAGADTPGKGEPPAPKS(1)PPKAR;EAAAQEAGADTPGKGEPPAPKS(1)PPKAR 139.16 1.0015000000000001e-25 84120000.0 2763.3 3077.3999999999996 3131.0 3346.9 3634.3 3240.5 3831.3 3715.3 3805.7 4050.7 4307.2 True False 3043.8281817660577 3336.743298136239 3343.488488232507 3553.630411638599 3379.039305654357 3214.1104423843517 3977.102218067803 3641.195426903535 3645.759663678246 3794.9381107032114 3777.4417055904064 0.80579090797387 0.8833341605769963 0.8851198109250309 0.9407505631071477 0.8945311586552254 0.8508696342362199 1.0528560142124523 0.9639315999277409 0.9651398877400865 1.0046318134008292 1.0 11.88319377619923 -7.748816861791964 24.999790239142932 0.9860639210783153 0.8811329197159469 0.7050551398060432 0.038464438388925104 108.4554116827919 214803.00780994666 0.005828152479795274 0.008612115040527292 1.7831305395782435e-08 7.748816861791964 -0.10493100136236844 EAADGYQR ddPTM_A549_MK2206_60min_R1 1 EAADGYQR 8 0 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 57.281000000000006 0.04715 3275400.0 726.84 1045.9 711.21 873.07 1005.7 779.49 754.83 813.98 1200.2 1302.1 1333.9 False True 849.5128224681233 1099.1318425999052 812.0702723846209 1086.9721891936017 857.762862242734 861.9751144164144 891.9728403222199 929.3641577092022 928.3566163255662 1007.9547056522756 1002.6558162328434 0.8472626485725624 1.0962204824478448 0.8099192756251229 1.0840930373072086 0.8554908357939834 0.8596919306317979 0.8896101991145084 0.9269024750696495 0.9258976024430471 1.005284853818872 1.0 9.969610738637563 -10.460153207811274 0.8252123124292965 0.9993182613291343 0.9239121915247851 0.11061061895099 0.08759982119846886 1.1389283200300269 1.4154907884734382 0.05070944436339352 0.015281328333918516 3.4661455227217253e-11 10.460153207811274 -0.07540606980434916 EAADGYQR ddPTM_A549_PD325901_60min_R1 2 EAADGYQR 8 0 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 93.429 0.0070919 9913400.0 2575.5 2676.0 2130.64 2147.5 2428.5 2362.9 2773.1 2769.1 2224.96 2736.1 2759.4 False True 2836.96286401711 2901.5159114228168 2275.2380429791456 2280.1461976736364 2257.9305378701847 2343.6573258169988 2878.631837998545 2713.8681281830745 2131.4526687068205 2563.3421790542525 2420.0112932778065 1.1722932334644436 1.198967921960741 0.9401766220261842 0.9422047756584109 0.9330247937859455 0.9684489210141703 1.1895117374016695 1.1214278775150883 0.8807614553814147 1.0592273623575987 1.0 11.240798064690003 -5.75850397738827 24.981408113967564 0.9715451372735227 1.1856306618905272 0.3306604459173791 0.09065811735248462 52.56740549277514 447343.28867845587 0.013530863246022495 0.04820283677690779 1.7437973872167973e-06 5.75850397738827 0.21408552461700459 EAAEMGK ddPTM_A549_MK2206_60min_R1 4 EAAEMGK 7 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ;;; 100.45 0.02429 31817300.0 25947.600000000002 25486.5 21344.3 18776.9 24556.9 20548.1 19257.7 22657.2 25663.5 33411.1 34495.9 False True 30326.9205220872 26783.65398835689 24371.242691833737 23377.241342927082 20944.61254032872 22722.486303275113 22756.574814293577 25868.92748476493 19850.75822618826 25863.50930498329 25929.615991593488 1.1695861802164498 1.0329367776615082 0.939899869698611 0.9015652738747115 0.8077486587969165 0.8763140306683237 0.8776286861198166 0.9976594907210259 0.7655631395630377 0.9974505335276994 1.0 14.66231322009754 -5.461989534123852 1.4674360959635853 0.8879870439522278 1.2219707723585844 0.5449356327114191 0.07301029053574644 0.5159418678896049 1.3162997178730063 0.012613306611718738 0.22349157932465277 3.451520569067785e-06 5.461989534123852 0.3339837284063566 EAAEMGK ddPTM_A549_PD325901_60min_R1 4 EAAEMGK 7 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ;;; 113.7 0.017356 105307000.0 38407.3 37478.5 31422.300000000003 31449.1 36178.8 31711.5 28158.5 30198.699999999997 34677.5 36855.0 43095.6 False True 42306.380822040126 40636.94472580718 33554.80623563982 33391.63948091172 33637.725898084325 31453.252057914313 29230.087126422455 29596.363238078156 33220.12526925464 34527.96901028637 37795.11440551678 1.1193610996416208 1.075190414554628 0.8878080345416808 0.8834908957449191 0.890001959966931 0.8322041764562889 0.7733826867886361 0.7830737835723579 0.8789528962083429 0.9135564094296398 1.0 15.205912135729365 -5.706240709452699 4.789966522244457 0.9021029478192613 1.1066569505388335 0.6158994692618434 0.0654163542471404 0.13777534523866086 6.417623349654863 0.011952275852496487 0.04840900507487151 1.9667958830731294e-06 5.706240709452699 0.20455400271957225 EAAENSLVAYK ddPTM_A549_PD325901_60min_R1 2 EAAENSLVAYK 11 0 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 ; 189.58 1.6746000000000001e-18 25339000.0 15963.9 16307.900000000001 15715.6 17334.7 18385.3 17206.9 16495.800000000003 17736.4 18071.0 18115.0 18397.3 False True 17584.54337599796 17682.223965580033 16782.155121579937 18405.42504903989 17093.97995384175 17066.772711329522 17123.556695848125 17382.633588063367 17311.53871359529 16971.215808474757 16134.548730093424 1.0898689309605587 1.0959230568748388 1.0401378682676528 1.1407461935833962 1.0594643977837968 1.0577781254890233 1.061297528818395 1.0773548042060868 1.0729484290630702 1.0518556231337801 1.0 13.977865606958387 -12.92721789177844 0.2420807125802123 0.8478968864025946 1.0878351904450867 0.2453908504654594 0.029336087536055697 8.305578289232178 0.25190339424779645 0.6516222283979878 0.01439631619535795 1.1824481556582047e-13 12.92721789177844 0.23993830404249206 EAAEPLSEPKEDQEAAELLS(ph)EPEEESER ddPTM_A549_MK2206_60min_R1 6 EAAEPLSEPKEDQEAAELLSEPEEESER 28 1 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EAAEPLSEPKEDQEAAELLS(1)EPEEESER;EAAEPLSEPKEDQEAAELLS(0.996)EPEEES(0.004)ER;EAAEPLSEPKEDQEAAELLS(0.965)EPEEES(0.035)ER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER 328.82 1.1294999999999995e-246 814084900.0 16779.48 17379.16 17134.879999999997 15241.77 23772.22 19451.86 17762.15 17262.25 26102.0 23491.23 24015.33 True False 19611.446005100737 18263.685011605856 19564.863639259554 18976.004334229056 20275.357928869424 21510.24291410034 20989.30273800635 19709.226800923476 20189.938676328886 18184.544827632213 18051.66077161038 1.0864067441342247 1.0117454146007954 1.083826241075224 1.0512054582851669 1.1231851841995737 1.1915935705998437 1.1627352742533232 1.0918234643496032 1.1184532510206124 1.0073613202520855 1.0 14.139843952215708 -4.334902952572554 15.402923513109917 1.077291723200849 1.0887788871748232 0.0 0.06056103789620777 0.0 0.0 0.009031228637877926 0.0 4.6248435658890055e-05 4.334902952572554 0.011487163973974202 EAAEPLSEPKEDQEAAELLS(ph)EPEEESER ddPTM_A549_PD325901_60min_R1 7 EAAEPLSEPKEDQEAAELLSEPEEESER 28 1 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EAAEPLSEPKEDQEAAELLS(0.861)EPEEES(0.139)ER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER;EAAEPLSEPKEDQEAAELLS(0.983)EPEEES(0.017)ER;EAAEPLSEPKEDQEAAELLS(0.994)EPEEES(0.006)ER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER 278.59 6.867999999999996e-168 1688283300.0 12483.66 13841.64 13253.710000000001 11463.3 14096.890000000001 14375.98 13653.0 12354.76 14421.61 13808.689999999999 15185.629999999997 True False 13750.991973215234 15008.123580039806 14153.186461632715 12171.36200595678 13106.773078030395 14258.90678522098 14172.572386208261 12108.334619678271 13815.5198841997 12936.806956794218 13317.893779639857 1.0325200216146406 1.1269141974224137 1.0627195783217491 0.9139104281312205 0.9841475908200876 1.0706577947798115 1.064175208235631 0.9091778940442717 1.0373652255224175 0.971385353483729 1.0 13.701078318269783 -6.016691608861118 24.874804445013112 1.0086822286005883 1.0834920676879047 0.27266537686977 0.05491975959501552 661.9567278998335 986489.7795450933 0.007262278096524925 0.019764844835477295 9.622953587209737e-07 6.016691608861118 0.07480983908731642 EAAFGGGLLS(ph)PGPEAT ddPTM_A549_MK2206_60min_R1 1 EAAFGGGLLSPGPEAT 16 0 K7ERX9;D6R992;Q01201 K7ERX9 RELB Transcription factor RelB 1 EAAFGGGLLS(1)PGPEAT 84.46799999999999 0.00011384 2088600.0 215.89 472.09 583.92 321.73 622.66 538.25 471.86 416.26 994.33 732.5 700.61 True False 252.32695399626195 496.1173645405764 666.7286363392355 400.5538644430084 531.0675388327144 595.2072577385663 557.5908541452283 475.26612974278555 769.1158426187299 567.0277412566559 526.6292011476818 0.4791358957049218 0.9420620114862392 1.2660305104354932 0.7605994190411058 1.0084278229831543 1.1302207633785453 1.0587921310289514 0.9024682427541793 1.4604504287696116 1.0767115458484522 1.0 9.040643709607117 -4.752789902599147 0.4911384192243883 1.1797468345074178 6.25177897690078e-19 0.32505918057150773 0.19970426864954013 5.801686937174913 0.6522476699813344 0.04540271357087149 4.4084081615152195 1.766892378444419e-05 4.752789902599147 -1.1797468345074178 EAAFGGGLLS(ph)PGPEAT ddPTM_A549_PD325901_60min_R1 1 EAAFGGGLLSPGPEAT 16 0 K7ERX9;D6R992;Q01201 K7ERX9 RELB Transcription factor RelB 1 EAAFGGGLLS(1)PGPEAT 96.464 4.8576e-06 2125600.0 607.14 475.34 672.31 850.97 557.38 569.92 640.23 758.12 758.76 779.35 681.3 True False 668.7764058471552 515.3985700058753 717.936999528456 903.5324842069078 518.231551656612 565.2787604763739 664.5943029972992 742.9987018663654 726.8719558589764 730.1417079952973 597.5044191165357 1.1192827775834722 0.8625853692729816 1.2015593133018008 1.5121770740086948 0.867326726089933 0.9460662421747268 1.1122834940366835 1.2435032747790489 1.2165131045117998 1.2219854525509248 1.0 9.222805573016956 -11.102587808028591 1.4772222278057716 1.0007610955857058 1.1304271630114089 0.0 0.18897929407028066 1.0160629662650764 4.001823418563013 0.12682385686194217 0.02834681909310834 7.896091857649851e-12 11.102587808028591 0.12966606742570308 EAAFS(ph)PGQQDWSR ddPTM_A549_MK2206_60min_R1 2 EAAFSPGQQDWSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR 168.0 1.4285999999999998e-21 22698000.0 7878.4 8762.0 7455.5 5454.200000000001 10668.2 8220.7 7764.8 6908.4 12629.7 12108.0 11644.0 True False 9208.081311613087 9207.9483744721 8512.802007513308 6790.479244848346 9098.921912079082 9090.609017540983 9175.563650800814 7887.686856087682 9769.09311548658 9372.794390628793 8752.473441948589 1.0520547560282645 1.0520395675056293 0.9726167196021881 0.7758354583863281 1.0395829216081989 1.038633145000108 1.0483395021599782 0.9011951773865221 1.1161522717299053 1.0708737881690849 1.0 13.09547506368351 -6.93788732659759 24.999966013729054 1.0416629374014001 0.9623572902200498 0.12011106413835226 0.08469565039393133 101.63829480939536 40907.86190356519 0.012933412057296333 0.02444185044763848 1.1537525486682617e-07 6.93788732659759 -0.07930564718135036 EAAFS(ph)PGQQDWSR ddPTM_A549_PD325901_60min_R1 2 EAAFSPGQQDWSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EAAFS(0.994)PGQQDWS(0.006)R;EAAFS(1)PGQQDWSR 81.992 0.00056523 33919000.0 19888.7 18929.9 18048.4 17446.3 21662.8 21289.1 17649.6 18588.1 23859.0 20693.8 25266.0 True False 21907.786182712898 20525.18910748984 19273.272957845915 18523.918327577914 20141.279660602937 21115.728627978606 18321.265186231703 18217.345763417652 22856.289201907475 19387.189936374005 22158.442174370164 0.9886880138195279 0.9262920626807671 0.8697936798164713 0.8359756602837285 0.9089664111811794 0.9529428315318291 0.8268300200012807 0.8221401856710383 1.0314935058180437 0.8749346991007535 1.0 14.435568837366525 -8.776837415665458 24.997919982012256 1.0148719462860891 0.8905229069411187 0.1236471523758097 0.0656230396381685 128.70450768086738 208944.3797788036 0.009001152159554085 0.009599529129221091 1.671716328035522e-09 8.776837415665458 -0.12434903934497044 EAAGPAPS(ph)PMR ddPTM_A549_MK2206_60min_R1 8 EAAGPAPSPMR 11 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR 122.46 8.4461e-06 562984700.0 18933.3 20497.7 20700.5 18289.3 26468.699999999997 20226.7 17219.6 19506.7 28691.399999999998 28653.5 29315.9 True False 22128.778165257438 21540.94537724455 23636.142171085685 22770.179321037882 22575.18929287487 22367.075968603167 20348.178425887298 22271.834461763312 22192.84371075099 22180.654449279977 22035.952952320564 1.0042124437793873 0.9775363663124954 1.072617200727714 1.0333194743293368 1.0244707520351428 1.0150264895282295 0.9234081444045047 1.0107043934044118 1.0071197628153359 1.0065666094528567 1.0 14.427571667354242 -7.5367361126689865 24.99978876981467 0.9973833170296225 1.0229719654107436 0.18564574288025526 0.03137172368398288 376.3778361161225 679012.4587560776 0.0047990876565102 0.007119472348044186 2.9057877417218977e-08 7.5367361126689865 0.025588648381121182 EAAGPAPS(ph)PMR ddPTM_A549_PD325901_60min_R1 8 EAAGPAPSPMR 11 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR 113.61 2.5311e-05 707404700.0 27675.879999999997 27514.93 26729.22 27700.81 33332.31 30859.7 27686.23 30679.1 30695.48 29806.36 32928.77 True False 30485.514963693975 29833.709714755252 28543.225605057196 29411.826120595975 30991.163535826938 30608.388834700938 28739.844633136392 30067.181283211623 29405.455722007067 27924.381342814788 28878.740042671394 1.0556386780949722 1.0330682595803276 0.9883819572073284 1.0184594645450906 1.0731480490504162 1.0598934991441387 0.9951903923325682 1.0411528078712637 1.0182388732526901 0.9669528968907078 1.0 14.817720179466974 -9.42278934950795 0.6808333302513273 1.002104196991114 1.033304274858778 0.28778142882667357 0.026756150786357367 0.7698810096062589 0.7833946173327445 0.00962812703693671 0.006190107834452528 3.7775537322056045e-10 9.42278934950795 0.03120007786766399 EAAKT(ph)PDAK ddPTM_A549_MK2206_60min_R1 2 EAAKTPDAK 9 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 EAAKT(1)PDAK;EAAKT(1)PDAK 45.915 0.016665 16871500.0 5077.5 4911.7 4075.6 3471.3 5992.1 6067.4 5789.9 6209.4 6131.200000000001 6282.6 7329.299999999999 True False 5934.457867043499 5161.684550433076 4653.581364337903 4321.7686558325795 5110.670027686875 6709.448240785835 6841.849884320475 7089.6014654899645 4742.492989514506 4863.3562965448 5509.2325316106 1.0771841328157892 0.9369153545102007 0.8446877741385603 0.7844592928389482 0.9276555306684057 1.2178553368892486 1.2418880207113514 1.2868582737816208 0.860826433138058 0.8827647532827988 1.0 12.427635641578817 -5.244480823748232 21.571576139342696 0.9768631108582285 1.0771846459836865 0.0032903046950493176 0.16672610907638793 1846.8858826803485 2349001.2080401145 0.024639717644706374 0.767203046727163 5.695333712911056e-06 5.244480823748232 0.10032153512545794 EAALHGHKDFHPR ddPTM_A549_MK2206_60min_R1 1 EAALHGHKDFHPR 13 1 Q9BZG1-4;Q9BZG1-2;Q9BZG1;V9GY61;K7EJW7;K7EIF2;H7C0Y7;C9JBG0;Q96PJ7;E7ES60 Q9BZG1-4 RAB34 Ras-related protein Rab-34 0 62.891000000000005 0.015496000000000001 2057400.0 411.2 503.28 434.87 358.76 458.59 338.97 460.94 345.47 510.94 727.8 500.91 False True 480.6005071252161 528.8948023173155 496.54110509118294 446.6562161053484 391.13201849049966 374.8395804099245 544.6868314959981 394.44143045750303 395.21290580351996 563.3894745209475 376.5202225872957 1.2764268113481994 1.4046916223595187 1.3187634429809691 1.186274174162828 1.0388074664430973 0.9955363827052304 1.4466336701734879 1.0475969331661923 1.0496458944164424 1.496306016844358 1.0 8.556583542700901 -2.0000054201372337 0.16142423647242027 0.9607239924526377 2.5889516883658263 0.0 0.1956313702457488 37.87671054350667 0.3721731596282743 0.17969602978039503 14.838350682082533 0.009999875197506827 2.0000054201372337 1.6282276959131887 EAALHGHKDFHPR ddPTM_A549_PD325901_60min_R1 1 EAALHGHKDFHPR 13 1 Q9BZG1-4;Q9BZG1-2;Q9BZG1;V9GY61;K7EJW7;K7EIF2;H7C0Y7;C9JBG0;Q96PJ7;E7ES60 Q9BZG1-4 RAB34 Ras-related protein Rab-34 0 55.04 0.04239 2484600.0 420.2 377.37 346.47 263.27 370.32 394.58 261.03 367.84 383.47 404.57 419.16 False True 462.85839466510964 409.17229428013036 369.9835376933618 279.5315899704485 344.3100007346455 391.3666713025821 270.9636394910968 360.5031426351022 367.35408945284615 379.0253811556519 367.605977274163 1.2591155293427307 1.1130730172403234 1.006467687051306 0.7604108944125573 0.9366278624948929 1.064636310335885 0.7371034646942377 0.9806781307210262 0.9993147885592486 1.0310642497332743 1.0 8.522016414817571 -5.54110572779013 2.4015837733957146 0.9650352961000093 1.2578212007428622 0.47531467788700565 0.10124165239092882 0.2399385003567636 2.37176950423582 0.013998764445106329 0.11241548706835976 2.8766980053118405e-06 5.54110572779013 0.2927859046428529 EAALILGVS(ph)PTANK ddPTM_A549_PD325901_60min_R1 2 EAALILGVSPTANK 14 0 Q96DA6-2;Q96DA6 Q96DA6-2 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 1 EAALILGVS(0.83)PT(0.17)ANK;EAALILGVS(0.984)PT(0.016)ANK 150.34 1.8665e-13 4722700.0 3346.3999999999996 3774.5 3718.2 3267.3999999999996 4667.4 4662.4 4282.6 4410.8 4168.6 4684.3 4273.2 True False 3686.1240645105236 4092.5903616089013 3970.539411352954 3469.2198771961985 4339.577925655874 4624.430960213795 4445.576686528642 4322.823133794339 3993.408238696992 4388.532498572361 3747.623490046647 0.9835897534265488 1.0920495008312483 1.0594819415286385 0.9257119575672786 1.157954617688091 1.2339635965288054 1.186238878674898 1.153483839898904 1.065584162684199 1.1710174488520289 1.0 11.871760302673131 -4.403939325830132 16.377259165693122 1.0642150819867109 1.0729576361925253 0.0 0.09651815190339998 0.0 0.0 0.013024116442482693 0.0 3.9451241454449424e-05 4.403939325830132 0.008742554205814379 EAALPPVS(ph)PLK ddPTM_A549_MK2206_60min_R1 4 EAALPPVSPLK 11 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK 155.14 3.8301e-13 730300000.0 108470.0 103435.0 96750.0 82193.0 122045.0 93010.0 85927.0 86305.0 120179.0 123433.0 121731.0 True False 126777.08416311348 108699.39969339444 110470.60481884684 102330.28868978414 104092.34217203404 102852.2564649588 101538.82364289634 98538.99804797741 92958.64838642745 95549.39957205857 91501.83309531465 1.38551414626911 1.1879477822063478 1.2073048274756748 1.1183414061572932 1.1375984354718254 1.1240458577241919 1.1096916882214423 1.0769073658374948 1.015921159629614 1.0442348130067263 1.0 16.481513025361753 -2.0000000000605405 0.2182611920879432 0.985901831717996 2.82936416618797 0.8611999922219151 0.03814374961255457 9.726530874329045 0.11254726669299094 0.02246522127098438 6.389424651107004 0.009999999998606004 2.0000000000605405 1.843462334469974 EAALPPVS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 EAALPPVSPLK 11 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLK;EAALPPVS(1)PLK 166.77 2.6563e-14 880920000.0 37477.0 39269.0 38826.0 36313.0 50391.0 43742.0 41557.0 45591.0 48683.0 57963.0 66638.0 True False 41281.63745089076 42578.33644456749 41460.96583970467 38555.97153719335 46851.709999512655 43385.77965461389 43138.47437586295 44681.651739552384 46637.02280969283 54303.20628797255 58441.94845308637 0.7063699712891869 0.7285577837766101 0.709438458797913 0.6597311102340082 0.8016794655147809 0.7423739420570714 0.7381423021939777 0.7645476053116211 0.7980059536709353 0.9291819955586157 1.0 15.834716657908945 -10.49197769643728 0.3274410522231364 1.0924420344368746 0.7032434880212225 0.8580583882279007 0.03634446851100666 0.5188908306456924 0.07949832223927371 0.07409438029435993 0.013338813445871211 3.2212342162602046e-11 10.49197769643728 -0.3891985464156521 EAALPPVS(ph)PLKAALSEEELEK ddPTM_A549_PD325901_60min_R1 2 EAALPPVSPLKAALSEEELEK 21 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLKAALSEEELEK;EAALPPVS(1)PLKAALSEEELEK 210.8 1.1832999999999997e-67 60658000.0 14092.099999999999 13667.8 17625.0 17282.5 18082.2 21682.5 19512.2 21413.3 23295.0 24897.0 24697.0 True False 15522.719617944293 14819.633473148262 18821.138487734883 18350.000773594707 16812.168652203523 21505.92490880996 20254.747448485534 20986.19493309111 22315.992160544632 23324.999171051386 21659.42556718198 0.7166727284524144 0.6842117500845791 0.8689583400703098 0.8472062528471825 0.776205656980906 0.9929129857162693 0.9351470280530065 0.96891742895015 1.0303132043518952 1.076898327645081 1.0 14.402707361075226 -6.571347508705094 0.49173676513743225 1.0184160149660335 0.6577911430555807 0.8126315568774752 0.05414944349384244 0.4665756526193181 0.1557397401889267 0.011460708013827469 0.07804346459937755 2.683196577429257e-07 6.571347508705094 -0.3606248719104528 EAALPPVS(ph)PLKAALSEEELEKK ddPTM_A549_MK2206_60min_R1 3 EAALPPVSPLKAALSEEELEKK 22 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(0.987)PLKAALS(0.013)EEELEKK;EAALPPVS(1)PLKAALSEEELEKK 73.805 4.4045e-05 101840000.0 3299.1 4153.1 3436.8999999999996 3015.4 4029.9 2562.7 2904.1000000000004 2130.27 3785.1 4513.7 4975.6 True False 3855.907424749028 4364.475050675654 3924.304100277982 3754.1731353664477 3437.107048376251 2833.883213017417 3431.7373787207184 2432.2422961782627 2927.7808935626563 3494.0520350992047 3740.0212004259206 1.0309854458338124 1.16696532366678 1.0492732233258664 1.0037839183742903 0.9190073703284962 0.7577184890542035 0.9175716379174284 0.6503284783255439 0.7828246784347733 0.9342332162986925 1.0 11.868830732759665 -6.59901084026899 1.9543092172188143 0.8668727952383075 1.0929067990635746 0.536552968939191 0.0964380881672425 0.2525038860768267 1.9316533975654604 0.01713114040384675 0.044062187336508664 2.517614085711234e-07 6.59901084026899 0.22603400382526706 EAALPPVS(ph)PLKAALSEEELEKK ddPTM_A549_PD325901_60min_R1 4 EAALPPVSPLKAALSEEELEKK 22 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(0.999)PLKAALS(0.001)EEELEKK;EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(1)PLKAALSEEELEKK 107.19 9.0231e-11 65385000.0 6883.56 7647.9 8471.900000000001 8427.7 8349.35 10288.9 11224.4 12519.6 11566.0 12922.0 11859.199999999999 True False 7582.373943790962 8292.415373307384 9046.854079673258 8948.259888304592 7762.920459693808 10205.110609673917 11651.550684227359 12269.886756563807 11079.92124184844 12106.10271471768 10400.59358166273 0.7290328080081346 0.7973021259024801 0.8698401690864791 0.8603604994316146 0.7463920591398361 0.9812046331342599 1.1202774719291204 1.1797294702676224 1.0653162393907432 1.1639819035003858 1.0 13.344378247616177 -7.4185747333341014 4.515141762395919 1.0513292472370952 0.8085324105440347 0.8012595521194086 0.07010525201400397 0.08929685228189772 3.011470876907283 0.010533833099026932 0.016970785035611117 3.814391506355848e-08 7.4185747333341014 -0.2427968366930605 EAALSTALSEK ddPTM_A549_PD325901_60min_R1 1 EAALSTALSEK 11 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 125.74 7.1502e-06 5773200.0 4275.3 5323.7 4486.4 4508.2 5167.2 5708.0 4395.1 5065.1 5101.6 5806.8 5737.2 False True 4709.325308690488 5772.346882526775 4790.874082914821 4786.6612751349385 4804.273697872272 5661.515940481367 4562.357935591004 4964.072607005922 4887.19749329189 5440.157657005314 5031.560771107278 0.9359571558258498 1.1472278970917555 0.9521646067410033 0.9513273302036566 0.9548277197524562 1.1252007474482826 0.9067480535640996 0.986587031902925 0.9713084499258431 1.0812067874136235 1.0 12.296790272657763 EAANEAGDS(ph)S(ph)QDEAEDDVK ddPTM_A549_PD325901_60min_R1 1 EAANEAGDSSQDEAEDDVK 19 0 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 2 EAANEAGDS(1)S(1)QDEAEDDVK 76.58800000000001 8.2337e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAANEAGDS(ph)SQDEAEDDVK ddPTM_A549_MK2206_60min_R1 1 EAANEAGDSSQDEAEDDVK 19 0 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 1 EAANEAGDS(0.975)S(0.025)QDEAEDDVK 138.07 4.149600000000001e-17 8082600.0 1167.7 1362.2 1001.3 662.68 1616.6 1260.8 1178.4 1348.4 1489.0 1546.8 2465.9 True False 1364.77921247596 1431.5301615733733 1143.2993964352595 825.036629748836 1378.8002814970712 1394.217019148694 1392.5000265433334 1539.5398293018122 1151.743877444399 1197.376805700744 1853.5489746222124 0.7363059898399109 0.772318498822048 0.6168163949745569 0.4451118589499335 0.7438704347038342 0.7521878505707469 0.7512615234928717 0.830590316404021 0.6213722395326219 0.6459914585989245 1.0 10.856074519328816 -10.90998928696365 0.8216453349259435 1.0305393623527963 0.690687912651146 0.0 0.1443399735044638 0.5003325470762707 0.5055616179585896 0.11636671073405355 0.019338415823330478 1.230299119060335e-11 10.90998928696365 -0.33985144970165027 EAANEAGDSS(ph)QDEAEDDVK ddPTM_A549_MK2206_60min_R1 2 EAANEAGDSSQDEAEDDVK 19 0 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 1 EAANEAGDS(0.412)S(0.588)QDEAEDDVK;EAANEAGDS(0.099)S(0.901)QDEAEDDVK 158.15 1.5698000000000002e-26 11114700.0 2065.95 2053.91 1323.88 1822.96 2585.1 2088.1 1738.13 2188.2 2596.2 2442.1000000000004 2143.89 True False 2414.6318523719356 2158.445246041085 1511.6260910343676 2269.5852818357835 2204.835214461263 2309.0613560313977 2053.9257222808587 2498.384051081447 2008.164845279482 1890.4279138878899 1611.5029446460978 1.4983725970803068 1.3393988842602462 0.9380225435246324 1.4083655815684575 1.368185656617256 1.4328620147439388 1.2745404711202197 1.550344080587527 1.246144074356932 1.1730837477948555 1.0 10.654191109250945 -9.91949225757947 0.8873672685169164 1.0271316206551433 1.3374583187789155 0.25743048749131836 0.1597100859328934 0.38932439994782864 0.6270714079504054 0.05961767387426545 0.03105619801256217 1.2036708481407982e-10 9.91949225757947 0.3103266981237722 EAANEAGDSS(ph)QDEAEDDVK ddPTM_A549_PD325901_60min_R1 1 EAANEAGDSSQDEAEDDVK 19 0 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 1 EAANEAGDS(0.012)S(0.988)QDEAEDDVK 280.65 2.1967999999999993e-126 7294200.0 2105.6 2263.1 2262.8 2092.2 2688.5 2929.3 2351.4 2575.8 2592.6 2528.0 2800.6 True False 2319.358961939207 2453.819379350141 2416.3672153217854 2221.430442269048 2499.6690348214893 2905.4447520063186 2440.883813735452 2524.42364832399 2483.6420380093596 2368.38164856882 2456.143954466123 0.9443090490367254 0.9990535672342188 0.9838052085375494 0.9044382102399641 1.0177208995735867 1.1829293420376321 0.9937869518181445 1.0277995488553149 1.0111956318737896 0.964268256452265 1.0 11.262179404127567 -6.9494073911611 24.931052236105824 1.0207461338838237 0.9624896073124601 0.25049381646873137 0.057432237849989194 133.51266717623187 65791.67830962437 0.00811328872505652 0.015332673352278291 1.1235505297453276e-07 6.9494073911611 -0.0582565265713636 EAAQEAVK ddPTM_A549_PD325901_60min_R1 1 EAAQEAVK 8 0 O43390-4;O43390;O43390-2;B4DT28;O43390-3;O60506-2;O60506;B7Z645;O60506-4;O60506-3;O60506-5 O43390-4;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 96.331 0.0068903 6856500.0 4263.6 4208.8 3872.7 4794.8 5005.7 4681.9 4258.5 5218.9 4529.2 4670.5 5188.3 False True 4696.437533303574 4563.490346784883 4135.524710436931 5090.963906219113 4654.116900727517 4643.7721586789985 4420.559547840612 5114.804945352152 4338.853474717267 4375.603832927485 4550.171991343497 1.0321450578655798 1.0029270004445376 0.9088721741298099 1.118850873308624 1.0228441715130263 1.0205706877703902 0.9715148254286944 1.124090464070994 0.9535581254888267 0.9616348219917576 1.0 12.151705363241277 EAARS(ph)PDKPGGS(ph)PSASR ddPTM_A549_MK2206_60min_R1 6 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.873)PS(0.111)AS(0.016)R;EAARS(1)PDKPGGS(0.599)PS(0.355)AS(0.046)R;EAARS(1)PDKPGGS(0.879)PS(0.095)AS(0.026)R;EAARS(1)PDKPGGS(0.584)PS(0.406)AS(0.011)R;EAARS(1)PDKPGGS(0.911)PS(0.081)AS(0.008)R;EAARS(0.999)PDKPGGS(0.781)PS(0.11)AS(0.11)R 102.16 1.3026e-08 1388719700.0 9801.720000000001 11159.810000000001 10399.63 8917.75 12433.980000000001 10494.18 8973.339999999998 9057.810000000001 13847.16 14493.269999999999 13240.11 True False 11456.01070695373 11727.796661597513 11874.453912064335 11102.59915033301 10604.958013193707 11604.667162127098 10603.679725205659 10341.78230587975 10710.800369370701 11219.23024098682 9952.225278553591 1.1511004208918683 1.178409484647636 1.1931456111280985 1.1155896133358638 1.065586611674347 1.1660374275424024 1.065458169245416 1.0391427059198135 1.0762216559196858 1.127308710059402 1.0 13.280803427342581 -2.000013938917332 0.08252083130198383 0.9078833150418397 1.6627840249753045 0.3055244496433518 0.04954351765686872 55.317837310446045 0.3220715467144537 0.42088623924384333 4.756289781611745 0.009999679049717955 2.000013938917332 0.7549007099334648 EAARS(ph)PDKPGGS(ph)PSASR ddPTM_A549_PD325901_60min_R1 6 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.96)PS(0.038)AS(0.002)R;EAARS(1)PDKPGGS(0.603)PS(0.39)AS(0.008)R;EAARS(1)PDKPGGS(0.842)PS(0.155)AS(0.004)R;EAARS(1)PDKPGGS(0.627)PS(0.367)AS(0.005)R;EAARS(1)PDKPGGS(0.782)PS(0.109)AS(0.109)R;EAARS(0.993)PDKPGGS(0.705)PS(0.156)AS(0.146)R 139.75 1.1878e-13 1652742300.0 18145.3 16880.54 17975.8 18103.62 19569.829999999998 18305.210000000003 18896.37 20821.899999999998 19322.740000000005 19876.519999999997 21514.699999999997 True False 19987.397498136157 18303.122348060293 19195.745885266657 19221.839491095878 18195.3126530484 18156.138438833037 19615.481700840417 20406.590870035438 18510.672434438387 18621.513135051868 18868.5282929202 1.0592981703631743 0.9700344438059826 1.0173419774593249 1.0187248943155913 0.9643207128070289 0.9622445458899693 1.0395872638461414 1.0815147081551848 0.9810342463955661 0.9869086155510594 1.0 14.20369427957805 -5.242757692884617 23.600033232814614 0.9984946283816 1.059298286311509 0.17797522747871286 0.03448148288109132 2405.3299408036323 3038480.23306834 0.0047427919833031695 0.2083598662844077 5.717975722842625e-06 5.242757692884617 0.06080365792990905 EAARS(ph)PDKPGGS(ph)PSASRR ddPTM_A549_MK2206_60min_R1 4 EAARSPDKPGGSPSASRR 18 3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.404)PS(0.328)AS(0.268)RR;EAARS(1)PDKPGGS(0.875)PS(0.07)AS(0.055)RR;EAARS(1)PDKPGGS(0.405)PS(0.328)AS(0.267)RR;EAARS(1)PDKPGGS(0.972)PS(0.015)AS(0.013)RR 67.097 0.00057697 165020000.0 4438.56 5112.469999999999 5035.99 4827.5 7132.4 3548.5299999999997 3720.46 3590.69 6954.4 8476.1 8582.400000000001 True False 5187.680415626701 5372.6728858750685 5750.169107614106 6010.237716714709 6083.233408233151 3924.0330892764227 4396.419423585719 4099.681303526938 5379.239503894777 6561.3431230928845 6451.153217810001 0.804147760946807 0.832823637027017 0.8913397207400601 0.9316532275379794 0.9429683659409738 0.6082684687201602 0.6814935679171777 0.6354958819159272 0.8338415353465887 1.0170806523364966 1.0 12.655341366577858 -10.0910823118854 1.02778909691871 0.9809148772583518 0.7977995711340018 0.3554794474314904 0.10832792877116265 0.4524846666570301 0.9586269869475099 0.04463452687150231 0.022465338202770718 8.108073708716059e-11 10.0910823118854 -0.18311530612435 EAARS(ph)PDKPGGS(ph)PSASRR ddPTM_A549_PD325901_60min_R1 1 EAARSPDKPGGSPSASRR 18 3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.764)PS(0.211)AS(0.025)RR 67.285 0.00056491 22225000.0 1493.9 1909.5 1492.9 1548.9 1685.8 2018.5 1682.7 2102.2 1487.0 2129.1 2061.6 True False 1645.5596282489462 2070.420266390832 1594.2171715369882 1644.5720351928724 1567.3952236942791 2002.0620052315417 1746.7360693087724 2060.269971856004 1424.506561181794 1994.6682626455213 1808.036269559152 0.9101364037626181 1.1451209808394254 0.881739596919536 0.9095901796228144 0.8669047463724012 1.1073129665256651 0.9660957021258615 1.1395069924998535 0.7878749918712235 1.1032235891660929 1.0 10.820207903448532 -8.777840214993267 24.999992858020754 0.8998298836074813 0.9885329326036372 0.0 0.12226585483505921 410.7182831477082 626060.3784243054 0.02028536359445505 0.02162594031946619 1.6678607366255199e-09 8.777840214993267 0.08870304899615589 EAARS(ph)PDKPGGSPS(ph)ASR ddPTM_A549_MK2206_60min_R1 1 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.114)PS(0.869)AS(0.017)R 123.53 1.5205e-10 575370000.0 2259.7 3038.3 2850.3 2600.2 2704.7 2481.5 2322.8 2584.3 3457.9 3552.8 3228.6 True False 2641.0821156392294 3192.936492371443 3254.5153996398894 3237.2491167274147 2306.8422128944244 2744.0906829136134 2744.822693189796 2950.632439086822 2674.691171131623 2750.2200124732394 2426.84951517307 1.088276013459731 1.3156713971792107 1.3410454085810075 1.3339307181955826 0.9505501673967258 1.1307214006295399 1.1310230304881719 1.215828348910377 1.1021248554593128 1.1332470329447306 1.0 11.244868936849313 -8.396739254130253 0.1788089208940238 0.9312568306996382 1.3300756317111748 0.14662877085017456 0.11508644946328722 2.703892173372151 0.3975204986155861 0.3452301679171417 0.40466789167138306 4.011074660808034e-09 8.396739254130253 0.39881880101153666 EAARS(ph)PDKPGGSPS(ph)ASR ddPTM_A549_PD325901_60min_R1 2 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.032)PS(0.883)AS(0.085)R;EAARS(0.999)PDKPGGS(0.35)PS(0.535)AS(0.116)R 120.85 2.6417000000000003e-10 483314100.0 3466.15 3847.84 3817.7200000000003 4077.92 4597.59 3585.17 4419.2699999999995 4476.43 3834.9 3857.79 4373.69 True False 3818.030996355236 4172.110980795653 4076.81343701533 4329.803856771721 4274.671139224451 3555.9735641793245 4587.447738167332 4387.144091958599 3673.7324892239794 3614.2084810254387 3835.75385710524 0.9953795625553045 1.0876899655767416 1.062845424625868 1.1288012782028016 1.114427906083226 0.9270598940003257 1.195970312242449 1.1437501610881469 0.9577602281280023 0.9422420248188196 1.0 11.90529442928112 -8.775188955957365 24.976169993648828 0.9800534340003657 1.0828189459156154 0.3440660636846432 0.07024833539944168 196.7534614350958 357402.329918772 0.01174769705413837 0.01253844395931306 1.6780737509086897e-09 8.775188955957365 0.10276551191524974 EAARS(ph)PDKPGGSPSAS(ph)R ddPTM_A549_PD325901_60min_R1 1 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.123)PS(0.305)AS(0.572)R 133.98 2.5155e-12 809460000.0 17594.0 18516.0 19294.0 20877.0 20959.0 17188.0 20193.0 20636.0 20022.0 20046.0 21945.0 True False 19380.129927981772 20076.40830190764 20603.406864247194 22166.524874892904 19486.912144624745 17048.026626663228 20961.4556650336 20224.398791371175 19180.544968380535 18780.29213892823 19245.904120816638 1.0069742531357595 1.043152255974959 1.070534630896465 1.1517528475535364 1.0125225618030296 0.885800247140577 1.089138527005411 1.0508417097171436 0.9966039967763629 0.9758072170075505 1.0 14.23226382622328 -6.972346672588653 24.932471430470745 1.00109031417254 1.0684502909819944 0.24301196689014426 0.056843480267531214 230.3651675958546 207697.95629019494 0.007933336019266369 0.014992351582175259 1.0657450579218128e-07 6.972346672588653 0.06735997680945438 EAARS(ph)PDKPGGSPSAS(ph)RR ddPTM_A549_PD325901_60min_R1 2 EAARSPDKPGGSPSASRR 18 3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.038)PS(0.129)AS(0.833)RR;EAARS(1)PDKPGGS(0.258)PS(0.06)AS(0.683)RR 86.51899999999999 6.4881e-06 182405000.0 5636.4 5460.700000000001 5853.9 5618.4 7388.0 8597.4 7056.700000000001 7795.2 6918.6 7464.7 7922.0 True False 6208.603178701624 5920.892353328317 6251.180856360353 5965.4358076878025 6869.092367216357 8527.385624858887 7325.246580074408 7639.718620783905 6627.835302079598 6993.377568066331 6947.644221695575 0.8936271030277961 0.8522158251625788 0.899755464858094 0.8586271284674298 0.9886937425157837 1.2273779935694198 1.054349697009482 1.0996128150786957 0.9539687253101847 1.0065825688408085 1.0 12.762308162380894 -6.82170572586459 5.7622237319566185 1.0132929386885297 0.876101861526802 0.5240667649924943 0.07429565834314326 0.1653943804133318 10.877841845839217 0.01227849606175528 0.023663232362180434 1.5076282758753632e-07 6.82170572586459 -0.13719107716172763 EAARS(ph)PDKPGGSPSASR ddPTM_A549_MK2206_60min_R1 4 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.994)PDKPGGS(0.003)PS(0.001)AS(0.001)R;EAARS(1)PDKPGGSPSASR;EAARS(1)PDKPGGSPSASR;EAARS(0.994)PDKPGGS(0.001)PS(0.001)AS(0.004)R 108.64 1.6203e-09 1474490000.0 9000.04 9909.0 8808.35 8290.27 11447.6 8571.16 7790.33 8154.990000000001 12307.67 12234.3 11800.3 True False 10519.026722147943 10413.325775238987 10057.5064801663 10321.386522164363 9763.673204544022 9478.154462124463 9205.732121335135 9310.984806109453 9520.002396310347 9470.563132909632 8869.959838288043 1.185915935801822 1.1739992023739336 1.1338841058504117 1.163633963438154 1.1007573182460397 1.0685679117971976 1.0378549947427833 1.0497211910608302 1.0732858513311787 1.0677120647186051 1.0 13.114711856918545 -2.0000000000000004 0.14998288652223601 0.9899779975903842 1.7637215629122178 0.7979902117304893 0.026069844078335194 16.074545934579298 0.15044695414290427 0.043174934208716674 2.729655898665487 0.00999999999999999 2.0000000000000004 0.7737435653218336 EAARS(ph)PDKPGGSPSASR ddPTM_A549_PD325901_60min_R1 4 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.999)PDKPGGSPSASR;EAARS(0.962)PDKPGGS(0.01)PS(0.012)AS(0.016)R;EAARS(0.996)PDKPGGS(0.002)PS(0.001)ASR;EAARS(0.999)PDKPGGSPSASR 67.86399999999999 0.00061329 970239000.0 10299.599999999999 10271.8 11662.6 10517.7 13009.1 11239.0 11706.900000000001 11833.0 11592.1 12075.1 12664.5 True False 11345.207809835221 11137.44063488523 12454.094168911019 11167.354441570205 12095.385694958613 11147.473310278581 12152.412485761492 11596.981532191083 11104.92434961363 11312.676125250546 11106.846786880042 1.0214607284613617 1.0027545034690968 1.1212988175566094 1.005447779721031 1.0890026599850358 1.0036577909264517 1.0941370416774385 1.0441290633350604 0.9998269142175723 1.018531752739548 1.0 13.439161675969165 -8.743937935964825 5.897401962057094 0.9998428049227823 1.04890930295188 0.1856563665899429 0.03822337598282069 0.15416757525628577 17.434477554000797 0.005856193619528084 0.006502248043195928 1.8032754244300595e-09 8.743937935964825 0.04906649802909757 EAAS(ph)SPAGEPLR ddPTM_A549_PD325901_60min_R1 1 EAASSPAGEPLR 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.5)S(0.5)PAGEPLR 185.57 2.8546999999999995e-19 73688000.0 2514.5 2238.0 2637.7 2329.4 3029.3 2427.4 2932.4 2758.1 2778.5 2975.8 2896.3 True False 2769.7701889229356 2426.604114261682 2816.710183778626 2473.281747548763 2816.5324185176655 2407.6320592019047 3043.994086670851 2703.0875318124076 2661.7293074940226 2787.9074801467937 2540.073461158409 1.0904291672177753 0.9553283207624322 1.1089089456861834 0.9737048102619894 1.1088389613870366 0.9478592237658733 1.198388209324713 1.0641769118676023 1.047894617299821 1.0975696265396038 1.0 11.310654506272273 -10.253561944844256 0.9825596703657856 1.003904621764348 1.0534043685496162 0.0 0.07656908275675506 1.004861376778356 1.910448780194095 0.028317248678537778 0.012136355373659506 5.5774804303746084e-11 10.253561944844256 0.04949974678526825 EAAS(ph)SPAGEPLRK ddPTM_A549_PD325901_60min_R1 1 EAASSPAGEPLRK 13 1 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.576)S(0.424)PAGEPLRK 42.813 0.033176 23120000.0 6215.3 6241.1 6592.4 5914.6 7636.7 6429.3 6865.3 6168.5 7063.4 7659.0 8168.1 True False 6846.27268053797 6767.0594001423515 7039.799907321616 6279.931408968795 7100.324537184772 6376.941912427618 7126.562748336311 6045.464428405362 6766.549861635159 7175.409432906884 7163.47548185201 0.9557194266780639 0.9446614869117733 0.9827352554156549 0.8766598594325352 0.9911843148165685 0.8902022389248068 0.9948470915257247 0.8439289620968169 0.9445903568425097 1.0016659442871143 1.0 12.806443990015799 -10.224151844226117 0.9957767560538512 0.9952057428270186 0.9364660724983875 0.21979585578636673 0.04627650487198958 0.5340745146469765 1.0475736234176267 0.017696337428823334 0.007852626611592936 5.968265790860549e-11 10.224151844226117 -0.05873967032863103 EAASGTT(ph)PQK ddPTM_A549_MK2206_60min_R1 2 EAASGTTPQK 10 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 EAAS(0.004)GT(0.194)T(0.803)PQK;EAAS(0.001)GT(0.01)T(0.99)PQK 108.7 0.00024694 868720000.0 3916.7000000000003 4006.8 2985.7 2330.7 3984.4 3017.0 3007.7 2824.6 3196.0 5899.799999999999 5958.9 True False 4577.743205878732 4210.729005573475 3409.117155634429 2901.7216046291005 3398.3000381027646 3336.2569374774835 3554.1601577005968 3224.9956999747105 2472.1111029632625 4567.031082410945 4479.140672726509 1.0220137165489382 0.9400751870135731 0.7611096423902347 0.6478299782584828 0.7586946439961164 0.7448430806810677 0.7934915237964908 0.7200032183877839 0.5519163794108876 1.0196221588260446 1.0 12.129006261116466 -5.657404328368522 3.5903978773618097 0.7644304398923214 1.0058575313368139 0.27342886655522647 0.1290755427766343 0.25900834366546927 6.201302302364549 0.02193670159139362 0.10158633287090166 2.2008764918822275e-06 5.657404328368522 0.24142709144449248 EAASGTT(ph)PQK ddPTM_A549_PD325901_60min_R1 2 EAASGTTPQK 10 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 EAASGT(0.047)T(0.953)PQK;EAASGT(0.005)T(0.995)PQK 159.01 1.2052000000000001e-08 1514690000.0 16086.900000000001 16068.2 12502.2 13461.5 15117.400000000001 10595.7 9279.4 10864.1 14085.0 14984.5 17887.4 True False 17720.030245450143 17422.323605352805 13350.674473835981 14292.986281715326 14055.605976198769 10509.41213219314 9632.532644882516 10647.407002778427 13493.056431906907 14038.376112729224 15687.363197571012 1.1295735314009854 1.1105960502049466 0.8510464318122731 0.9111146405999201 0.8959826963383559 0.6699285278115055 0.6140313399752223 0.678725090296057 0.860122651714734 0.894884368770329 1.0 13.937315257574042 -5.757168672909126 21.90905773194942 0.8685745853802787 1.1200854747804534 0.43877391221408535 0.12112345569114852 20.6797640041054 106064.65547779939 0.020554529965523975 0.07391889584312861 1.7491672086055783e-06 5.757168672909126 0.25151088940017474 EAASS(ph)PAGEPLR ddPTM_A549_MK2206_60min_R1 2 EAASSPAGEPLR 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.048)S(0.952)PAGEPLR;EAAS(0.038)S(0.962)PAGEPLR 149.58 3.9669e-12 117151000.0 4831.4 4972.700000000001 4103.200000000001 4012.0 4529.6 3001.5 2695.2 2877.8 4227.8 6611.7 6481.0 True False 5646.822203610822 5225.789189881007 4685.0954593559945 4994.940180105527 3863.3018403248393 3319.1167377655493 3184.882952766119 3285.7369628928745 3270.210050409288 5118.112377974926 4871.588833499557 1.1591335797430933 1.072707358623081 0.9617181620786348 1.0253205577937412 0.7930270744030743 0.6813211974995901 0.6537667815611247 0.6744692697171922 0.6712820318335647 1.0506043413968245 1.0 12.250176658279226 -6.728565437492306 4.835910698728206 0.7977617209108695 1.0532982301099456 0.48494944426815845 0.13162472879459794 0.1622171715282649 8.964999030446405 0.02206936122831011 0.04579681497666612 1.8682481570195772e-07 6.728565437492306 0.2555365091990761 EAASS(ph)PAGEPLR ddPTM_A549_PD325901_60min_R1 1 EAASSPAGEPLR 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.003)S(0.997)PAGEPLR 112.95 4.1899999999999995e-05 74937000.0 2624.3 2850.3 2522.2 2723.0 2959.4 2540.0 2456.2 2253.2 2489.2 3066.6 2909.3 True False 2890.7170040924498 3090.504784128721 2693.371659220704 2891.193525618306 2751.5419533757554 2519.3150821343174 2549.6720350842115 2208.2581583987953 2384.5875804261727 2872.9743526507687 2551.474543572197 1.1329593749523739 1.2112622451650463 1.0556137689109935 1.1331461381427246 1.0784124655711649 0.9873957349412333 0.9992935424370483 0.8654831238516372 0.9345919544576863 1.126005493524719 1.0 11.317115532480814 -7.137404592824632 1.442278604784726 0.9604384904123897 1.1399856272567186 0.49391144554872446 0.06874281866721763 0.16283268442509943 0.6645772407487629 0.00797451824690082 0.01678277661805612 7.287782572245885e-08 7.137404592824632 0.17954713684432888 EAASS(ph)PAGEPLRK ddPTM_A549_PD325901_60min_R1 1 EAASSPAGEPLRK 13 1 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.273)S(0.727)PAGEPLRK 49.188 0.012924000000000001 27202000.0 4356.0 3573.4 5197.3 4341.8 5124.3 3969.0 4685.6 4872.5 5513.3 5556.4 6051.4 True False 4798.217913282286 3874.5429588483894 5550.0200319037995 4609.9831250567595 4764.386845875308 3936.6777799177576 4863.9130720587 4775.314165097697 5281.595174017201 5205.56795573884 5307.116162985183 0.9041102108802064 0.730065602458758 1.0457694652724514 0.868641835505576 0.8977355496954871 0.7417734338235077 0.9164889033299043 0.8997945434854859 0.9951911757375919 0.9808656520551411 1.0 12.373712411690972 -8.639791970189183 2.1996221292914235 0.9989773980570457 0.869277276236706 0.29530679139098714 0.08061828772736038 0.2411466010505212 2.3119128011203975 0.013704640554157987 0.015445186189710549 2.2919652557589047e-09 8.639791970189183 -0.12970012182033963 EAASSSSGTQPAPPAPAS(ph)PWDSKK ddPTM_A549_MK2206_60min_R1 2 EAASSSSGTQPAPPAPASPWDSKK 24 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EAASSSSGTQPAPPAPAS(0.996)PWDS(0.004)KK;EAASSSSGTQPAPPAPAS(0.998)PWDS(0.002)KK 186.56 1.0071e-50 70711000.0 8667.099999999999 7748.4 5998.7 5360.5 12583.7 10843.1 8185.8 9014.6 13266.3 13057.9 12910.2 True False 10129.894589749425 8142.760463907734 6849.405861775882 6673.822740641993 10732.65439952659 11990.509644932748 9673.05390128854 10292.44715605466 10261.50423192789 10108.111320894583 9704.241036606385 1.0438626319706392 0.8390929731847729 0.705815718708812 0.6877222768341147 1.105975661470157 1.2355947878563702 0.996786236533058 1.0606133047632929 1.057424706704975 1.0416179155860532 1.0 13.244399669621542 -6.771624555442009 24.999547392276938 1.0485297970901681 0.8124563842123642 0.5585910660039806 0.10650994707526232 124.6430387713973 305937.1412436544 0.01581893309466898 0.030136989362287363 1.6919029379234628e-07 6.771624555442009 -0.23607341287780392 EAASSSSGTQPAPPAPAS(ph)PWDSKK ddPTM_A549_PD325901_60min_R1 2 EAASSSSGTQPAPPAPASPWDSKK 24 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EAASSSSGTQPAPPAPAS(0.997)PWDS(0.003)KK;EAASSSSGTQPAPPAPAS(1)PWDSKK 185.72 1.1171999999999999e-50 105335000.0 11260.6 8651.4 8834.6 9099.5 9389.3 9534.2 7518.200000000001 7285.799999999999 13115.4 11085.2 12933.599999999999 True False 12403.767822384421 9380.483840090936 9434.169082765533 9661.555448536092 8729.82795932654 9456.556636253936 7804.309215116901 7140.479003400469 12564.205348032081 10385.27858018794 11342.849192845488 1.0935319346578378 0.8269953766120495 0.8317283358326004 0.8517750068148774 0.7696327272721643 0.8337020509995555 0.6880378185790812 0.6295137034797511 1.107676310812363 0.915579357851153 1.0 13.469495453699816 -8.781925758396861 24.999980327010135 1.0508471688658183 0.8125540452098288 0.3237164338312345 0.1192678765798863 149.35945081292732 182265.85691673888 0.01994457234647031 0.021244546914435145 1.6522442212871181e-09 8.781925758396861 -0.23829312365598954 EAATQEDPEQLPELEAHGVS(ph)ES(ph)EGEERPVAEEEILLR ddPTM_A549_PD325901_60min_R1 2 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 2 EAATQEDPEQLPELEAHGVS(1)ES(1)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(1)ES(1)EGEERPVAEEEILLR 125.57 5.0163000000000004e-21 65007000.0 1378.13 1379.28 836.12 1074.55 876.07 562.6700000000001 1050.21 689.74 1446.8899999999999 802.69 699.1300000000001 True False 1518.036743074315 1495.5167661835803 892.8641311980074 1140.9225130198859 814.537865477427 558.0878020726441 1090.1763162469626 675.9825946094375 1386.0822449955117 752.0080164120676 613.1414421502184 2.475834511773874 2.439105666938725 1.456212335063885 1.8607819249972704 1.3284664997050826 0.9102105382332217 1.7780176665661946 1.102490466537121 2.260623976312344 1.2264837518972127 1.0 9.260076109286866 -5.757806084391723 24.692445832127653 1.5329955939628628 2.457470626967563 0.4888958352981674 0.3927241547160112 64.29307690796578 436921.63287629787 0.06731207423980494 0.24161918710615973 1.7466018491193778e-06 5.757806084391723 0.9244750330047002 EAATQEDPEQLPELEAHGVS(ph)ESEGEERPVAEEEILLR ddPTM_A549_MK2206_60min_R1 3 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.856)ES(0.144)EGEERPVAEEEILLR 153.58 3.4712999999999996e-41 75137500.0 1099.52 1189.8600000000001 707.6400000000001 1218.28 1812.46 1145.9699999999998 984.65 1167.73 1865.77 1579.73 1041.73 True False 1285.0920953169211 1250.418791697029 807.9939927029337 1516.7586546906678 1545.849534951243 1267.235784766679 1163.5481594839553 1333.2593035231419 1443.1760740224547 1222.8678958298663 783.0396907146267 1.6411583097966664 1.5968779188649525 1.0318685020494083 1.9370137589148593 1.9741649794794591 1.6183544714191431 1.4859376520519216 1.7026714218105183 1.8430433235196122 1.5616933730572948 1.0 9.612941626468434 -10.86140587391841 1.0560408152144016 0.9919850068498866 1.6558042513503182 0.09080819552705299 0.29015390307039624 0.3700067920298998 0.7180280769710674 0.1854061144994402 0.04287553439184411 1.3759229863081382e-11 10.86140587391841 0.6638192445004316 EAATQEDPEQLPELEAHGVS(ph)ESEGEERPVAEEEILLR ddPTM_A549_PD325901_60min_R1 4 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR 85.00399999999999 1.1555e-06 253870000.0 375.12 775.44 942.03 248.83 675.03 804.6299999999999 524.86 812.69 333.6 872.3299999999999 1340.8400000000001 True False 413.20190625125156 840.7890502069172 1005.9618206865757 264.1996639660678 627.6182215270786 798.0773600542258 544.8338345144123 796.4802604070289 319.57995212524963 817.2509349272304 1175.9251802850672 0.3513845210382206 0.7150021653614845 0.8554641379842814 0.22467387244996376 0.5337229205134733 0.6786803900744401 0.46332355463494196 0.6773222257337381 0.27176895051076055 0.6949854877068904 1.0 10.199580554474464 -11.011984535510893 1.2912272741063913 1.000407941186331 0.5136966682892832 0.2178628638150043 0.2050870137664169 0.32384161612706835 0.9601230866355795 0.13773996515585224 0.031119320657628343 9.727818622706716e-12 11.011984535510893 -0.48671127289704774 EAAVSASDILQESAIHS(ph)PGTVEK ddPTM_A549_MK2206_60min_R1 2 EAAVSASDILQESAIHSPGTVEK 23 0 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2;F5H8B7 E7ENF1 C12orf43 Uncharacterized protein C12orf43 1 EAAVSASDILQESAIHS(0.925)PGT(0.075)VEK;EAAVSASDILQESAIHS(0.997)PGT(0.003)VEK 159.13 1.8444e-33 28950000.0 4667.1 5492.4 4844.1 4918.5 6854.700000000001 5345.4 4767.8 5774.1 9161.0 7559.2 8640.2 True False 5454.792380360159 5771.939700062835 5531.066220185798 6123.532720799858 5846.382710366185 5911.04668001065 5634.047544597173 6592.596357439623 7086.048127110901 5851.571469907591 6494.59988261115 0.8398966031710429 0.888729067900982 0.8516407969942617 0.9428652775354492 0.9001913614446793 0.9101479362627213 0.8674972510134078 1.015088916422835 1.0910676954993508 0.9009902958879386 1.0 12.665024931943597 -8.341107872123853 4.656764034783395 1.0432858973825843 0.8883376167634119 0.46194006007845434 0.054263683871007364 0.0788920751306395 3.13293256178237 0.006777441988229328 0.008255533558025909 4.559236574049506e-09 8.341107872123853 -0.15494828061917232 EAAVSASDILQESAIHS(ph)PGTVEK ddPTM_A549_PD325901_60min_R1 3 EAAVSASDILQESAIHSPGTVEK 23 0 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2;F5H8B7 E7ENF1 C12orf43 Uncharacterized protein C12orf43 1 EAAVSASDILQESAIHS(0.999)PGT(0.001)VEK;EAAVSASDILQESAIHS(0.995)PGT(0.005)VEK;EAAVSASDILQESAIHS(0.963)PGT(0.037)VEK 262.26 3.933599999999999e-124 43085900.0 7670.5 8367.5 8196.199999999999 9390.1 10746.7 9949.2 9218.3 11712.599999999999 9520.400000000001 10607.699999999999 11408.400000000001 True False 8449.203513276345 9072.658590743806 8752.443419754476 9970.105150535604 9991.888866102328 9868.177013846747 9569.107450947313 11478.983004643047 9120.290696082822 9937.92801167859 10005.239123806086 0.844477918890777 0.906790780158034 0.8747860307435575 0.9964884424214424 0.9986656732999022 0.9863009660975299 0.9564096702275653 1.1472972172479508 0.9115514964937068 0.9932724134531339 1.0 13.288468027413458 -6.255920771606607 24.080609553614103 0.9777158286140059 0.8784954837067936 0.4437930468695577 0.05812580579143546 244.40781227472652 1066471.220368992 0.0086447664466999 0.022166061408477586 5.54726902621673e-07 6.255920771606607 -0.09922034490721221 EADDDEEVDDNIPEMPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 EADDDEEVDDNIPEMPSPK 19 0 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 EADDDEEVDDNIPEMPS(1)PK 131.59 3.6516e-17 10762000.0 938.83 781.62 756.97 675.07 908.5 629.94 385.92 1010.6 1173.5 914.44 1016.8 True False 1097.2815518102307 821.4011194310524 864.319728472584 840.4621803050436 774.860853482673 696.5998326796699 456.0366685706072 1153.8556448326988 907.7041236944275 707.8673688938378 764.3004977476238 1.4356677184482993 1.074709648694071 1.1308637519139586 1.0996488721149162 1.0138170206171135 0.911421403927557 0.5966719502532537 1.5096884644627149 1.1876272832078625 0.9261636895172866 1.0 9.577996159678342 -5.261201497889961 8.016725448087898 1.0725627027861409 1.4385950174881252 0.21078011408439656 0.21128171102718532 0.11672721913793707 91.23695018694839 0.027715654584763053 0.22816555280432202 5.48022642033034e-06 5.261201497889961 0.3660323147019844 EADDDEEVDDNIPEMPS(ph)PK ddPTM_A549_PD325901_60min_R1 5 EADDDEEVDDNIPEMPSPK 19 0 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 EADDDEEVDDNIPEMPS(1)PK;EADDDEEVDDNIPEMPS(1)PK;EADDDEEVDDNIPEMPS(1)PK;EADDDEEVDDNIPEMPS(1)PK;EADDDEEVDDNIPEMPS(1)PK 113.24 2.5721999999999997e-11 59081660.0 7249.71 8475.07 7729.69 8140.259999999999 8277.96 7645.16 8766.98 8024.130000000001 8321.289999999999 8795.51 10019.4 True False 7985.69522224557 9189.29389216075 8254.27324580195 8643.065372328192 7696.544647011678 7582.900351704717 9100.612221375533 7864.082432341795 7971.575119365468 8240.15999754887 8787.077318209625 0.9087999266487236 1.0457736468435987 0.9393650410582441 0.9836109390339614 0.8758935842139438 0.8629604676392831 1.0356813638723952 0.8949599676384898 0.9071930097674027 0.9377589042573498 1.0 13.101167673047643 -4.929616111443086 18.88522142237703 0.9513826434868845 5.102511324705551e-05 0.03337760141120871 0.05908514390364505 277.53919891654573 148349.63416132992 0.008065946491739013 10880.883205554574 1.1759365483994039e-05 4.929616111443086 -0.9513316183736374 EADDDEEVDDNIPEMPS(ph)PKK ddPTM_A549_MK2206_60min_R1 7 EADDDEEVDDNIPEMPSPKK 20 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK 140.59 3.81e-21 179430700.0 14918.4 17045.0 15099.199999999999 14662.7 21669.1 17084.6 16373.1 16606.3 23987.8 21912.600000000002 23303.899999999998 True False 17436.26120013819 17912.517694918617 17240.49360496882 18255.062158233617 18481.604094883205 18892.481032160358 19347.88033316078 18960.29387966085 18554.601600645234 16962.52844103837 17516.89847507951 0.9953966008847948 1.0225850038693742 0.9842206729402514 1.0421400902793527 1.0550728555729278 1.078528887921445 1.104526601023927 1.0824001695639667 1.0592401175951334 0.9683522722455794 1.0 14.096459734926393 -6.2938234155500545 14.842052766776838 1.0441945298783952 1.0029205270183823 0.2429604702038638 0.03708172349579307 6.361063824198655 2915.3833753987815 0.00547589089765198 0.01274329960794463 5.08366102568054e-07 6.2938234155500545 -0.041274002860012926 EADDDEEVDDNIPEMPS(ph)PKK ddPTM_A549_PD325901_60min_R1 4 EADDDEEVDDNIPEMPSPKK 20 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK;EADDDEEVDDNIPEMPS(1)PKK 160.36 2.7164999999999997e-27 384739000.0 31679.100000000002 30588.0 32535.6 30701.5 34364.899999999994 32247.8 31792.699999999997 35735.6 33284.600000000006 34060.3 38169.6 True False 34895.13891107919 33165.75810859532 34743.66146845656 32597.861926834503 31951.227976469032 31985.184608524003 33002.588596133 35022.82542396412 31885.764012314416 31909.726845232846 33474.98117702997 1.0424244520568606 0.9907625618428477 1.0378993578731908 0.9737977671874739 0.9544808347313869 0.9554952231152188 0.9858881897976653 1.046238838455158 0.9525252260393785 0.9532410690981604 1.0 15.030795623872354 -6.272242256124167 24.31544673317704 0.9792010654913754 1.02040216790302 0.33088628058089287 0.028965167399842957 480.8014013029608 1082203.2050349219 0.004194413334509356 0.00984151189227711 5.342662543484941e-07 6.272242256124167 0.04120110241164454 EADLVFIS(ph)VNTPTK ddPTM_A549_MK2206_60min_R1 2 EADLVFISVNTPTK 14 0 O60701;E7ER83;E7ETF4;E7EV97 O60701 UGDH UDP-glucose 6-dehydrogenase 1 EADLVFIS(0.913)VNT(0.085)PT(0.002)K;EADLVFIS(0.594)VNT(0.395)PT(0.011)K 59.861999999999995 0.0022553 651690.0 247.43 178.3 272.79 167.91 241.33 265.79 144.69 297.85 370.81 266.95 204.68 True False 289.1901349172965 187.37470841912517 311.47572391248826 209.04795753776637 205.83067668791787 293.9157213828772 170.9783001023039 340.0711496273694 286.8221270618922 206.64580959517295 153.85230711937808 1.8796606975344623 1.2178868937840248 2.0245112325212387 1.358757378760401 1.3378458896180763 1.9103757810717796 1.111314502223469 2.210374065846794 1.8642692620744343 1.3431440416088853 1.0 7.265402267796063 -10.863547779771578 1.141801219901492 1.0042860774678082 1.6590601730957568 0.2005537701744292 0.35399553344450524 0.4270870942965644 0.9989558252221756 0.21719007384476793 0.054179271500489005 1.3691537499308494e-11 10.863547779771578 0.6547740956279486 EADLVFISVNT(ph)PTK ddPTM_A549_MK2206_60min_R1 2 EADLVFISVNTPTK 14 0 O60701;E7ER83;E7ETF4;E7EV97 O60701 UGDH UDP-glucose 6-dehydrogenase 1 EADLVFIS(0.029)VNT(0.97)PT(0.001)K;EADLVFIS(0.001)VNT(0.988)PT(0.011)K 127.76 1.2995000000000002e-08 14918100.0 1421.95 1723.27 1430.66 1583.38 2182.17 2002.01 1756.02 1751.17 2874.1 1877.5500000000002 2208.8 True False 1661.9403966602663 1810.9770823187089 1633.5491006731938 1971.308171080629 1861.1756837031185 2213.8613693733155 2075.066103708949 1999.403710233205 2223.12093899459 1453.4101509848936 1660.294000221234 1.0009916294576822 1.0907568672038785 0.9838914676891705 1.1873247574332935 1.120991633683623 1.3334152680659683 1.2498184679535351 1.2042467839833093 1.3389923343084773 0.8753932440828112 1.0 10.697223017261452 -6.272542016842718 23.530404983346017 1.1838879513197114 1.031767681619553 0.16794835006011521 0.13171858874980513 380.18512331472675 805747.5702348006 0.0186505436024415 0.04376281640116263 5.338976178926976e-07 6.272542016842718 -0.15212026970015846 EADLVFISVNT(ph)PTK ddPTM_A549_PD325901_60min_R1 4 EADLVFISVNTPTK 14 0 O60701;E7ER83;E7ETF4;E7EV97 O60701 UGDH UDP-glucose 6-dehydrogenase 1 EADLVFIS(0.002)VNT(0.996)PT(0.001)K;EADLVFIS(0.004)VNT(0.975)PT(0.021)K;EADLVFISVNT(0.981)PT(0.019)K;EADLVFIS(0.001)VNT(0.998)PT(0.001)K 173.36 1.1646e-22 19436700.0 7168.7 6647.299999999999 8189.7 7199.999999999999 9331.9 7357.6 7403.8 7671.4 7917.0 7512.900000000001 8658.0 True False 7896.461146681986 7207.491299701377 8745.5022906668 7644.7276476135885 8676.459537307293 7297.682145004509 7685.55566051482 7518.387908903118 7584.276022109121 7038.534211840465 7593.120887583982 1.0399493519975451 0.9492132953509046 1.1517665028838344 1.0067965150026772 1.1426736997556237 0.9610912631375902 1.012173488911784 0.9901578047041152 0.9988351475492345 0.9269619588632707 1.0 12.890477261688629 -7.3149180865918835 24.999902623615096 0.9973256633356012 1.0543880194143451 0.2784276434348849 0.058276266087033776 354.81486440462527 165866.20659750493 0.0073468317371389695 0.011744728072999807 4.842636972022271e-08 7.3149180865918835 0.05706235607874388 EADPES(ph)EADR ddPTM_A549_MK2206_60min_R1 1 EADPESEADR 10 0 F8W785;O00461 F8W785 GOLIM4 Golgi integral membrane protein 4 1 EADPES(1)EADR 48.44 0.031162 3359300.0 351.24 362.12 376.12 347.63 454.2 215.76 282.79 324.14 542.24 421.65 426.16 True False 410.5207250064712 380.5503612604242 429.45947167405376 432.79936560570377 387.3877816751016 238.59157999010324 334.16928250694946 370.08783763711745 419.4235057793489 326.39897215135693 320.33271058234374 1.2815448171376929 1.1879847068025264 1.340666929997017 1.3510932580656627 1.2093294530266865 0.7448242783459719 1.043194377181936 1.155323279237772 1.3093371108334975 1.0189373778219062 1.0 8.32342731534717 -7.004378623473484 24.908234234697815 1.1110153076877474 1.2858089988245907 0.35932371959039866 0.14066472993128912 238.49640654085698 1356727.312754169 0.02436166589638749 0.0452501506588726 9.89968501389569e-08 7.004378623473484 0.1747936911368433 EADQPTTEPGMVLDSVEAGDTT(ph)PPTKR ddPTM_A549_PD325901_60min_R1 1 EADQPTTEPGMVLDSVEAGDTTPPTKR 27 1 A0A0J9YVR0;A0A0J9YWV8 A0A0J9YVR0 1 EADQPT(0.001)T(0.002)EPGMVLDS(0.017)VEAGDT(0.249)T(0.697)PPT(0.035)KR 44.178000000000004 0.013108000000000002 12166000.0 1534.0 1658.8 1497.3 1210.3 1952.8 2060.8 1391.5 1845.8 1382.0 1500.8 1898.1 True False 1689.7305507288859 1798.5928975591053 1598.915781996336 1285.0574822092674 1815.642064794274 2044.0175280560618 1444.4542939580165 1808.9840709979126 1323.919346034458 1406.0392318718696 1664.6457330472572 1.0150691628757003 1.080465868414325 0.9605141504008797 0.7719705500682567 1.0907077876988318 1.2278994187636167 0.8677247448403547 1.0867081416094664 0.7953159760971636 0.8446477253139085 1.0 10.700999462824916 -8.750906967950186 24.999503128403898 0.9033436499597031 1.0100820567064372 0.17869811874852293 0.1238300074158878 342.3037881146724 812484.581190128 0.022583262381617866 0.025474325114773568 1.7745695781997756e-09 8.750906967950186 0.10673840674673418 EAEAAIYHLQLFEELRR ddPTM_A549_MK2206_60min_R1 2 EAEAAIYHLQLFEELRR 17 1 P14618;B4DNK4;P14618-3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 152.71 1.1682000000000001e-17 14742700.0 411.62 346.44 515.87 495.87 825.3299999999999 627.14 717.23 546.9300000000001 907.06 524.97 758.6400000000001 False True 481.0913928572022 364.072316235119 589.0281230790545 617.3581722604505 703.9250503080394 693.5035385381595 847.5414070245042 624.4590024028777 701.6123582771766 406.37891239250047 570.2487506011579 0.8436518139672103 0.6384447416172554 1.0329318958754392 1.0826120558960097 1.2344175231703 1.2161421446466407 1.486266135841637 1.095064218456544 1.230361938605801 0.7126344634058288 1.0 9.155447570411676 -5.925251139245825 3.7384830198343924 1.1503846548032697 0.7424192846861061 0.3889206595817508 0.18500028573898855 0.12712909028755337 3.503483156591789 0.02049623341926118 0.07053006996212528 1.1878151515442366e-06 5.925251139245825 -0.4079653701171636 EAEAAIYHLQLFEELRR ddPTM_A549_PD325901_60min_R1 4 EAEAAIYHLQLFEELRR 17 1 P14618;B4DNK4;P14618-3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 153.95 4.2293e-19 11847100.0 615.05 587.54 652.8299999999999 666.73 966.6599999999999 1457.1200000000001 969.29 1251.96 1117.29 905.6800000000001 1046.44 False True 677.4894232241211 637.054057771809 697.1349695857003 707.9123978463068 898.7651363959607 1445.253697826596 1006.1768613658402 1226.9886756563797 1070.3341867806362 848.4952102356843 917.7345139297045 0.7382194010805336 0.6941594198565854 0.7596259691711874 0.7713694833324429 0.9793302123372067 1.5748058680261183 1.0963702967402076 1.3369756253390326 1.1662786683237025 0.9245541029098491 1.0 9.841933054925953 -6.869414045115157 3.923255587409529 1.138729674658027 0.7375663929295974 0.5981709608404426 0.16650865235043036 0.13023205307101657 3.7506079945522086 0.024408077582987193 0.048061823773701995 1.350784146486859e-07 6.869414045115157 -0.40116328172842974 EAEALLQSMGLTPES(ph)PIVPPPMSPSSK ddPTM_A549_MK2206_60min_R1 1 EAEALLQSMGLTPESPIVPPPMSPSSK 27 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAEALLQS(0.001)MGLT(0.032)PES(0.572)PIVPPPMS(0.287)PS(0.083)S(0.025)K 56.468 0.00087932 18909000.0 811.72 1246.6 935.13 802.82 1625.6 903.04 713.68 730.48 1720.8 930.27 1661.2 True False 948.7184913513628 1310.0466153408934 1067.7454954444263 999.5109360399597 1386.4763934192988 998.599093410562 843.3464179764483 834.0277770011772 1331.0415475529355 720.1213608994254 1248.6781932123845 0.7597782170846301 1.0491467076642307 0.8551006185969455 0.8004551865109375 1.1103552548254334 0.7997249402118075 0.6753913238500879 0.6679285195615806 1.0659604330309163 0.5767069248216957 1.0 10.286186001098178 -8.799071602473212 24.99807483779819 1.0311480393917876 0.8481270306921154 0.0 0.1889324433440703 154.77481662066415 102812.07592679656 0.02312024813655465 0.024613650378872854 1.5882848652335034e-09 8.799071602473212 -0.1830210086996722 EAEALLQSMGLTPES(ph)PIVPPPMSPSSK ddPTM_A549_PD325901_60min_R1 1 EAEALLQSMGLTPESPIVPPPMSPSSK 27 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAEALLQS(0.001)MGLT(0.045)PES(0.874)PIVPPPMS(0.051)PS(0.02)S(0.008)K 61.602 0.00014874 22111000.0 931.2 1264.5 1451.0 1471.9 1725.7 1700.9 1532.0 1299.2 1875.1 1373.2 1562.7 True False 1025.7347384867917 1371.0638527631363 1549.473585571819 1562.8159200725615 1604.4927853418067 1687.0484343315984 1590.301098342567 1273.2864367973175 1796.2960678358986 1286.4959176482218 1370.4978067714824 0.7484395330067268 1.0004130221798657 1.1305918024210155 1.1403271952358158 1.1707372149113848 1.2309749245829313 1.1603820819596062 0.9290685694688062 1.3106887577350308 0.938707024040304 1.0 10.420484304060771 -5.297576584584341 1.8094746592220428 1.1427899676305036 0.6363375931609048 0.44450431069303564 0.1148087035261889 0.529710854777063 1.829778977284633 0.01720200091895295 0.44386612774670764 5.039917360920334e-06 5.297576584584341 -0.5064523744695988 EAEALLQSMGLTPESPIVPPPMS(ph)PSSK ddPTM_A549_MK2206_60min_R1 4 EAEALLQSMGLTPESPIVPPPMSPSSK 27 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAEALLQS(0.001)MGLT(0.005)PES(0.05)PIVPPPMS(0.541)PS(0.183)S(0.22)K;EAEALLQS(0.007)MGLT(0.035)PES(0.235)PIVPPPMS(0.494)PS(0.169)S(0.06)K;EAEALLQS(0.007)MGLT(0.007)PES(0.092)PIVPPPMS(0.605)PS(0.202)S(0.087)K;EAEALLQS(0.004)MGLT(0.032)PES(0.21)PIVPPPMS(0.492)PS(0.189)S(0.074)K 50.478 0.0021169 32956900.0 3866.35 4373.61 4090.26 4458.57 6221.099999999999 5155.4 4354.98 4321.05 6864.0 6139.8 6204.5 True False 4518.895356818046 4596.20806780129 4670.320372778672 5550.9198501528135 5305.984431041335 5700.941006122444 5146.223494225806 4933.572070160627 5309.3149595556415 4752.81491572371 4663.751414511341 0.9689400131313661 0.9855173784563455 1.0014085138086244 1.1902263557360784 1.1377073860608597 1.2223938412291595 1.1034515000549225 1.057854853672032 1.1384215168577851 1.0190969657892244 1.0 12.187275177272234 -6.031099238129125 21.017896093942156 1.0920609387164617 0.9812870825558557 0.404696762924709 0.06475486671643868 88.1813169646646 59596.80653830199 0.010707039750998907 0.028402162318236095 9.308951376800563e-07 6.031099238129125 -0.11077385616060598 EAEALLQSMGLTPESPIVPPPMS(ph)PSSK ddPTM_A549_PD325901_60min_R1 6 EAEALLQSMGLTPESPIVPPPMSPSSK 27 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAEALLQSMGLT(0.001)PES(0.006)PIVPPPMS(0.693)PS(0.225)S(0.075)K;EAEALLQSMGLTPES(0.011)PIVPPPMS(0.641)PS(0.242)S(0.105)K;EAEALLQS(0.001)MGLT(0.028)PES(0.181)PIVPPPMS(0.48)PS(0.142)S(0.168)K;EAEALLQS(0.003)MGLT(0.018)PES(0.237)PIVPPPMS(0.413)PS(0.152)S(0.176)K;EAEALLQS(0.001)MGLT(0.015)PES(0.102)PIVPPPMS(0.539)PS(0.157)S(0.186)K;EAEALLQSMGLTPESPIVPPPMS(0.688)PS(0.245)S(0.066)K 83.236 5.4666e-07 116602000.0 13716.9 12297.599999999999 12557.899999999998 13291.1 16318.199999999999 14497.099999999999 13191.5 14543.2 16711.5 17397.0 16378.400000000001 True False 15109.429590151927 13333.961910430957 13410.154610787282 14112.061060721806 15172.065926733885 14379.040424098177 13693.509751165773 14253.124467080317 16009.173770806692 16298.550451009398 14363.960631231865 1.0518985660054772 0.9282928471301042 0.9335972824674343 0.9824630840353079 1.056259225171151 1.0010498352963684 0.9533240937316191 0.9922837323912909 1.114537569533406 1.1346835924606415 1.0 13.810165983529014 -8.592945143188313 12.911720025834708 1.054075971202821 0.9845694985074683 0.3695088604155502 0.052020637060389265 0.8954801037437381 163.07770222316614 0.009394845034287027 0.010652560051916183 2.5530237610502478e-09 8.592945143188313 -0.0695064726953526 EAEDGPMEES(ph)K ddPTM_A549_MK2206_60min_R1 2 EAEDGPMEESK 11 0 A0A590UK21;A0A0A0MRJ5;A0A0A0MRJ4;A0A499FJM7;A0A590UK91;E7EPW4;E7EPN8;P45379-7;P45379-11;P45379-12;P45379-9;P45379-8;P45379-10;P45379-4;P45379-2;P45379-3;P45379-5;P45379;P45379-6 A0A590UK21 TNNT2 Troponin T, cardiac muscle 1 EAEDGPMEES(1)K;EAEDGPMEES(1)K 85.288 0.00028943 32507000.0 1632.4099999999999 1444.1599999999999 1160.71 1172.4 2067.31 1622.15 1085.76 1010.8 2430.5 2034.77 2272.83 True False 1907.920899407282 1517.6615754939073 1325.3161314654649 1459.6380526310359 1763.211437548998 1793.804836303978 1283.028537694917 1154.0839954451728 1879.9956307109542 1575.1140437908616 1708.4235840831352 1.1167727472172608 0.8883403329440662 0.7757538258152332 0.854377138216799 1.0320692444053714 1.0499766293419934 0.7510014200509201 0.6755256753637819 1.1004271120033133 0.9219692694866319 1.0 10.738450003702411 EAEDGPMEES(ph)K ddPTM_A549_PD325901_60min_R1 2 EAEDGPMEESK 11 0 A0A590UK21;A0A0A0MRJ5;A0A0A0MRJ4;A0A499FJM7;A0A590UK91;E7EPW4;E7EPN8;P45379-7;P45379-11;P45379-12;P45379-9;P45379-8;P45379-10;P45379-4;P45379-2;P45379-3;P45379-5;P45379;P45379-6 A0A590UK21 TNNT2 Troponin T, cardiac muscle 1 EAEDGPMEES(1)K;EAEDGPMEES(1)K 62.924 0.0045786 45585000.0 884.3499999999999 1087.65 1001.97 685.49 1223.73 1275.12 1160.54 1098.75 1310.28 973.9300000000001 1110.95 True False 974.1285609759391 1179.3100826080067 1069.969709535076 727.8311604392552 1137.7794264393165 1264.7358454846878 1204.704984771856 1076.8345692972996 1255.213488221439 912.435893588067 974.3101928922875 0.9998135789631747 1.210405157629694 1.0981817878337272 0.7470220118283406 1.1677794553927046 1.2980833565235088 1.2364696516164224 1.1052276545528723 1.2883099216023557 0.9364942502340619 1.0 9.928237348634685 EAEDS(ph)DS(ph)DDNIKR ddPTM_A549_MK2206_60min_R1 3 EAEDSDSDDNIKR 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR 62.891000000000005 0.0024157 33288000.0 3630.4199999999996 3758.6899999999996 3695.2099999999996 3567.79 4717.09 3244.79 3595.1099999999997 4133.5599999999995 5039.93 5468.200000000001 5396.700000000001 True False 4243.14614075274 3949.9912663369705 4219.246342456341 4441.898710164181 4023.21230969134 3588.151524082717 4248.294951142401 4719.504788496588 3898.393902114407 4232.9298221701665 4056.550448657161 1.0459986124805494 0.9737315771937547 1.040106956848777 1.0949940759727472 0.9917816530602112 0.8845327007508318 1.0472678707961622 1.1634281018393064 0.961012059742753 1.0434801380496557 1.0 11.986037715027575 EAEDS(ph)DS(ph)DDNIKR ddPTM_A549_PD325901_60min_R1 4 EAEDSDSDDNIKR 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR 112.08 6.0606e-05 118789000.0 15070.6 14694.5 13463.0 13891.599999999999 16395.8 14324.5 14659.3 14669.3 15422.5 14692.8 15508.0 True False 16600.556217610658 15932.857085352234 14376.680139595732 14749.652581887343 15244.21557043934 14207.846021272839 15217.167683376763 14376.70930365678 14774.345958188438 13765.094100511058 13600.614313311673 1.2205740002025331 1.1714806933211734 1.0570610862425884 1.0844842918198954 1.1208475749157143 1.044647373565092 1.1188588495214427 1.0570632305619827 1.0862998992426371 1.0120935557328758 1.0 13.731384196227456 -2.0000000000000004 0.11232978962296127 0.9776468120495281 1.566429705921683 0.6410062258543641 0.03784611054182239 48.65863186365722 0.36731634341974173 0.17912904963148632 4.474959673835104 0.00999999999999999 2.0000000000000004 0.5887828938721549 EAEDS(ph)DSDDNIKR ddPTM_A549_MK2206_60min_R1 1 EAEDSDSDDNIKR 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 EAEDS(0.978)DS(0.022)DDNIKR 130.06 1.8594e-08 47556000.0 1716.4 1774.5 1873.4 1745.4 2498.5 1890.4 1688.6 1685.0 2516.9 2453.6 2377.7 True False 2006.086358048933 1864.8144704976878 2139.07629010468 2173.0230783539823 2130.9739597429357 2090.4408732540373 1995.396762407563 1923.8539100960784 1946.826168663403 1899.3300559007935 1787.251468818376 1.1224421370179305 1.0433979230301553 1.1968524448990436 1.2158462959835503 1.1923190423515548 1.16964003651714 1.1164611120598493 1.0764315730947565 1.0892849733957854 1.0627100265619125 1.0 10.803526922563192 -9.286570648484517 0.5475291707168011 1.0082985438535108 1.1557800811619667 0.45795185040304576 0.049182557505807176 0.42556590096667446 0.2928524527672763 0.02370578193185273 0.015352393146042354 5.169271604435569e-10 9.286570648484517 0.14748153730845592 EAEDS(ph)DSDDNIKR ddPTM_A549_PD325901_60min_R1 1 EAEDSDSDDNIKR 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 EAEDS(0.821)DS(0.179)DDNIKR 152.71 1.149e-13 72930000.0 7182.0 7670.7 7160.9 7076.8 8521.8 6939.9 7128.5 7603.1 6717.9 7755.2 8324.7 True False 7911.111352891046 8317.13680932399 7646.881735989826 7513.917863421086 7923.258166614015 6883.38375531651 7399.778968364878 7451.450205983435 6435.570025126545 7265.535348489288 7300.814674621206 1.0835929557822264 1.139206674870913 1.0474011568286488 1.0291889601773705 1.085256717193017 0.9428240630794599 1.013555239812851 1.0206327017018884 0.8814865616980542 0.995167754873363 1.0 12.833841743375018 -7.037872841385578 0.7124325445422152 0.9486099130857795 1.1050250790055456 0.48324692670117797 0.04823114073081137 0.44977647509325025 0.4232152797170526 0.010482977026235438 0.03506963448344118 9.164887928303049e-08 7.037872841385578 0.15641516591976612 EAEDS(ph)LRR ddPTM_A549_MK2206_60min_R1 2 EAEDSLRR 8 1 K7EMQ6;K7EJ19;K7EIU7;K7EPK2;O43776-2;O43776 K7EMQ6 NARS Asparagine--tRNA ligase, cytoplasmic 1 EAEDS(1)LRR;EAEDS(1)LRR 91.584 0.0010902000000000002 31077000.0 879.7 966.87 580.61 593.01 900.1899999999999 552.29 578.28 817.14 994.79 976.36 1277.68 True False 1028.1718533999335 1016.0795531643269 662.9492285671386 738.2974766212305 767.7732434744819 610.732961219569 683.3459906224367 932.9720973862972 769.4716533531991 755.7995978885306 960.3967938259084 1.0705698519713205 1.0579789100675736 0.690286798986661 0.7687421296775613 0.7994333679685904 0.6359173261986929 0.7115246479532783 0.9714444106686777 0.8012018139792766 0.7869659735927177 1.0 9.907486777079848 -10.777093413158886 0.7995569714387054 1.0116232872761928 0.825656870363848 0.0 0.15073961113090262 1.1352777433211119 1.1508704548340374 0.13667846866760605 0.026880396566591965 1.670731215164128e-11 10.777093413158886 -0.18596641691234472 EAEDS(ph)LRR ddPTM_A549_PD325901_60min_R1 2 EAEDSLRR 8 1 K7EMQ6;K7EJ19;K7EIU7;K7EPK2;O43776-2;O43776 K7EMQ6 NARS Asparagine--tRNA ligase, cytoplasmic 1 EAEDS(1)LRR;EAEDS(1)LRR 93.667 0.0010684000000000002 48173000.0 2005.43 1675.42 2194.43 1767.95 2650.5 2131.44 1992.03 2200.48 1842.75 1921.8 2203.3500000000004 True False 2209.019777280464 1816.613523287001 2343.3572159795763 1877.1522561942277 2464.338023728605 2114.082259316679 2067.8377917306434 2156.589700156836 1765.3056258357426 1800.4572200235605 1932.351918186436 1.1431767456487367 0.9401049085261558 1.212696918157061 0.971433949751754 1.2753049796651184 1.0940461928388292 1.07011449222529 1.116043966867512 0.9135528623029128 0.9317439556834646 1.0 10.916142145081976 -8.753808573466005 24.98994240822005 0.9591777392446733 1.1010822762845673 0.35703319283718493 0.09196778189651757 136.52819800085294 447112.02772490995 0.014615455423537161 0.016417800661979242 1.762752854146816e-09 8.753808573466005 0.14190453703989403 EAEDSDS(ph)DDNIKR ddPTM_A549_MK2206_60min_R1 2 EAEDSDSDDNIKR 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 EAEDS(0.039)DS(0.961)DDNIKR;EAEDS(0.055)DS(0.945)DDNIKR 200.77 6.209999999999999e-31 44308500.0 6059.219999999999 6143.1 5488.92 5331.78 7815.0 6277.92 5318.299999999999 5453.4 8589.0 8259.04 8245.9 True False 7081.868202293901 6455.757550698415 6267.331392271471 6638.0663393526975 6665.423852467902 6942.245327453969 6284.566268809751 6226.436150337065 6643.605213814601 6393.317127847603 6198.21545473754 1.1425656713628678 1.0415510073571297 1.011150941434458 1.0709641166602173 1.0753778891911956 1.1200393690973969 1.0139315605762316 1.0045530355963916 1.0718577407206185 1.0314770718337871 1.0 12.597637189647346 -14.999999999881233 0.22616081314574993 0.6718167660774077 1.0692833337355638 0.16562513053585348 0.04151658303031229 50.443936677502 0.6273110769066652 7.399887599484566 0.02630176190538893 1.0000000002734715e-15 14.999999999881233 0.39746656765815613 EAEDSDS(ph)DDNIKR ddPTM_A549_PD325901_60min_R1 1 EAEDSDSDDNIKR 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 EAEDS(0.376)DS(0.624)DDNIKR 166.04 1.2092999999999998e-19 60644000.0 6901.4 7797.8 6421.4 7021.0 7519.7 6801.1 7498.1 6798.3 6924.9 7080.1 7388.2 True False 7602.02504745784 8454.947972381477 6857.194819015077 7454.671224152085 6991.5422135566905 6745.714096497521 7783.444298617759 6662.702573336821 6633.870534988438 6633.061277702574 6479.4982376585795 1.1732428605775644 1.304876961497059 1.0582910230859144 1.150501312096335 1.0790252512026521 1.041085875645695 1.2012418266248919 1.0282744633856777 1.0238247301978805 1.0236998351433284 1.0 12.661666382020535 -2.000000100958898 0.16895391443873226 0.9764034796350431 2.02319649840007 0.4740709233064492 0.06651534727651859 28.485328285058113 0.2880348754526697 0.07749988146496171 7.60201895216746 0.009999997675335732 2.000000100958898 1.046793018765027 EAEEES(ph)DHN ddPTM_A549_MK2206_60min_R1 2 EAEEESDHN 9 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAEEES(1)DHN;EAEEES(1)DHN 155.5 1.4176e-05 515990000.0 8755.099999999999 8155.299999999999 7003.3 4556.3 264.95 0.0 0.0 212.841 208.06 12100.8 12053.099999999999 True False 10232.74683835598 8570.369935897315 7996.473247832867 5672.593704540078 225.97620597714257 0.0 0.0 243.01186354822528 160.93474220354713 9367.22087562941 9059.982621362979 1.1294444223576858 0.9459587610785056 0.8826146342684575 0.6261152964205903 0.02494223393368351 0.0 0.0 0.02682255294565529 0.017763250651725446 1.0339115721416483 1.0 13.145292567593918 -11.019267710156276 1.3471051423610392 0.9953163757372834 0.35422234958050836 0.23491368579162497 0.41459858573148106 0.5666545293419238 1.8532578120538854 0.32317082550680165 0.07538480866230814 9.566042143622102e-12 11.019267710156276 -0.641094026156775 EAEEES(ph)DHN ddPTM_A549_PD325901_60min_R1 22 EAEEESDHN 9 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN;EAEEES(1)DHN 178.95 1.5075999999999998e-13 2478580900.0 10819.81 11821.23 10783.99 11242.92 12284.75 10618.551000000001 7302.679999999999 9708.21 11641.859999999999 14066.07 14079.409999999998 True False 11918.229146076867 12817.446538710297 11515.856410799894 11937.369633876078 11421.911540086778 10532.077041225364 7580.587483579823 9514.572135606584 11152.593109858692 13177.93593966947 12347.731826733516 0.9652160666684749 1.0380405663621415 0.9326292935733698 0.9667661884291185 0.9250210241331702 0.8529564124823994 0.6139255038862632 0.7705522171292232 0.903209858001023 1.0672353533900467 1.0 13.591958434893796 -6.7297068783306475 2.577260415937915 0.902964414496244 0.9810694838813403 0.12399655107646512 0.11517509735499203 0.6472263347989639 8.767466536230899 0.018701082339925644 0.04144810638004645 1.8633443534840556e-07 6.7297068783306475 0.07810506938509632 EAEEES(ph)EDN ddPTM_A549_MK2206_60min_R1 1 EAEEESEDN 9 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 EAEEES(1)EDN 90.62899999999999 0.0010562999999999998 1749800.0 138.29 140.18 91.17200000000001 123.77 0.0 0.0 0.0 0.0 0.0 210.88 183.35 True False 161.62997113411032 147.31456324280967 104.10156054308946 154.0936555562464 0.0 0.0 0.0 0.0 0.0 163.2420615374793 137.8191347974299 1.1727687259949657 1.0688977510948416 0.755349108061813 1.1180860755129336 0.0 0.0 0.0 0.0 0.0 1.1844658709940143 1.0 7.1066323953850485 -6.746670084245686 24.99267367392654 0.3653846079236136 1.0121109958736756 0.4105200185139015 0.40980638071327213 236.37995133344543 400000.9686622145 0.0670950100886641 0.13920815435470457 1.7919666208569438e-07 6.746670084245686 0.646726387950062 EAEEES(ph)EDN ddPTM_A549_PD325901_60min_R1 2 EAEEESEDN 9 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 EAEEES(1)EDN;EAEEES(1)EDN 118.5 0.00016491 9528400.0 565.66 316.28 375.28000000000003 440.22 225.09 460.68 140.88 197.96 321.94 512.79 484.49 True False 623.0853867831169 342.93402558475645 400.7487575419656 467.4113895878408 209.28045491834445 456.9283748179669 146.24126549249402 194.0115325033843 308.40998137650746 480.41235188671135 424.90080143515405 1.4664255390401013 0.807091971647159 0.9431583941201993 1.100048265404777 0.4925395626731564 1.0753765897231444 0.34417742917534255 0.456604298810656 0.7258399615505908 1.1306459066776535 1.0 8.730982254596627 -2.945595190085566 1.2103444787172712 0.8059499444621303 199.98895307903294 0.3334507392889041 0.2646140319413095 408.9557407198268 2.490734333908082 0.03710814276419998 224048.0714692477 0.0011334563761998258 2.945595190085566 199.1830031345708 EAEEGEDDRDS(ph)ANGEDDS ddPTM_A549_MK2206_60min_R1 5 EAEEGEDDRDSANGEDDS 18 1 G3V4C1;G3V2Q1;P07910-2;P07910;G3V2D6;P07910-4;P07910-3 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(0.764)ANGEDDS(0.236);EAEEGEDDRDS(0.935)ANGEDDS(0.065) 342.05 2.099599999999999e-197 546053530.0 26681.960000000003 27219.95 23621.41 22884.11 35687.759999999995 27183.34 20293.29 28678.06 24497.47 31118.34 29043.25 True False 31185.22253670899 28605.3291891933 26971.281130480176 28490.717977306747 30438.137779289784 30059.862995959298 23980.318112399495 32743.26282787536 18948.832159420977 24088.685381374264 21831.00947207777 1.4284828457701608 1.3103072134973877 1.235457350929049 1.3050572862307104 1.394261580904936 1.3769341740429535 1.0984520959999915 1.499851065969008 0.8679778268456552 1.1034160107064266 1.0 14.414091222048961 -8.771462004495541 24.995553543675644 0.9376561704789 1.3222293556061002 0.6269552469918077 0.11492350488305456 70.37682310779861 175513.1737798404 0.01771031830143716 0.01896168526296378 1.6925363143767968e-09 8.771462004495541 0.3845731851272002 EAEEGEDDRDS(ph)ANGEDDS ddPTM_A549_PD325901_60min_R1 13 EAEEGEDDRDSANGEDDS 18 1 G3V4C1;G3V2Q1;P07910-2;P07910;G3V2D6;P07910-4;P07910-3 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(0.866)ANGEDDS(0.134);EAEEGEDDRDS(0.874)ANGEDDS(0.126);EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(0.999)ANGEDDS(0.001);EAEEGEDDRDS(0.962)ANGEDDS(0.038);EAEEGEDDRDS(0.792)ANGEDDS(0.208);EAEEGEDDRDS(0.752)ANGEDDS(0.248);EAEEGEDDRDS(0.993)ANGEDDS(0.007);EAEEGEDDRDS(0.989)ANGEDDS(0.011) 326.37 1.3812999999999994e-173 996189260.0 38797.07 38768.64000000001 38888.89000000001 33925.36 46716.85999999999 29579.250000000004 34463.439999999995 31880.870000000003 36797.48999999999 41131.98999999999 40718.29 True False 42735.71998550663 42035.809351353906 41528.123933292954 36020.85243711722 43435.62891801773 29338.366394969074 35774.965068318 31244.981037791324 35251.01946201842 38534.90913177067 35710.198464507026 1.196737117772739 1.1771373769634468 1.1629205582424433 1.0086993068078005 1.2163368109306123 0.8215682817929163 1.0018136724688145 0.8749596020544731 0.9871415163669562 1.0791009512330538 1.0 15.124048531478593 -6.684608907382523 1.1662819119460288 0.9773513075369344 1.1822449784050468 0.45797477647116935 0.0921176022764368 0.3043445643474993 0.8016775679375153 0.012718233078459153 0.040364902570440626 2.0672409179787288e-07 6.684608907382523 0.2048936708681124 EAEEGPTGASES(ph)QDSPR ddPTM_A549_MK2206_60min_R1 1 EAEEGPTGASESQDSPR 17 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 EAEEGPT(0.07)GAS(0.07)ES(0.43)QDS(0.43)PR 63.037 0.0030161 34494000.0 207.98 169.53 0.0 0.0 0.0 0.0 198.04 219.95 194.74 145.5 186.41 True False 243.08193937719471 178.15835287882382 0.0 0.0 0.0 0.0 234.02130452871847 251.12858606862466 150.63170093587792 112.63144894586134 140.11925234572627 1.7348218414513177 1.2714766164983593 0.0 0.0 0.0 0.0 1.6701581018381468 1.7922489726750548 1.0750250120105804 0.8038256489405018 1.0 7.1305113850542385 -7.758676915097892 24.999998894913904 1.1484072726024275 0.4677442194894913 0.27829232799352144 0.5999631645795691 88.91706470363663 804683.1562481555 0.09798779429192878 0.14175951830195596 1.7431031387197586e-08 7.758676915097892 -0.6806630531129362 EAEEGPTGASESQDS(ph)PR ddPTM_A549_MK2206_60min_R1 1 EAEEGPTGASESQDSPR 17 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 EAEEGPT(0.005)GAS(0.061)ES(0.047)QDS(0.888)PR 79.02199999999999 0.00032955 34075000.0 240.38 177.9 154.98 197.36 210.44 325.7 0.0 385.11 131.91 418.35 416.47 True False 280.9502672732477 186.9543501276634 176.95849441679468 245.71320885982706 179.48455476818233 360.16535781783756 0.0 439.7005218499113 102.03259561698498 323.84444444330654 313.04900501273863 0.8974641758143113 0.5972047415389671 0.5652740995282635 0.7849033375775415 0.5733433165228515 1.1505079142582857 0.0 1.4045740916251082 0.3259317039286966 1.0344848226881558 1.0 8.290244705574466 -11.219572526232117 1.6790335811464485 1.000156741069597 0.6446724825846952 0.08515306237861475 0.36314557077625326 0.641670468187906 3.257779747783624 0.24713727347778225 0.05107157226663376 6.0315297428330876e-12 11.219572526232117 -0.35548425848490184 EAEEGPTGASESQDS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EAEEGPTGASESQDSPR 17 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 EAEEGPTGASESQDS(1)PR;EAEEGPTGASESQDS(1)PR 158.17 3.4098000000000006e-22 75304000.0 635.94 665.73 645.8900000000001 508.08 653.15 790.63 616.52 875.39 992.77 773.4000000000001 876.8 True False 700.500160645716 721.8334034796379 689.72397945209 539.4629476665989 607.2749972451763 784.1913714125408 639.9820059726885 857.9296597198297 951.0473293506715 724.5673920107299 768.9591584931431 0.9109718675025865 0.9387148790764738 0.8969578836978509 0.7015495448727519 0.7897363475521847 1.0198088711879663 0.8322704774422623 1.1157025054503982 1.2367982341407433 0.9422703195714535 1.0 9.586763164549438 -8.266918724104007 24.180248197854535 1.1152369016532786 0.8698768102633486 0.4436430172681233 0.10608129480411725 176.92231639516 780753.9861852345 0.01874067910667771 0.02299701250634295 5.4085553170306855e-09 8.266918724104007 -0.24536009138992998 EAEEGPTGASESQDS(ph)PRK ddPTM_A549_MK2206_60min_R1 2 EAEEGPTGASESQDSPRK 18 1 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 EAEEGPTGASES(0.248)QDS(0.751)PRK;EAEEGPTGAS(0.001)ES(0.025)QDS(0.974)PRK 113.51 2.9868e-10 24535000.0 3005.8 2566.23 2629.2 2458.1 3394.3999999999996 2233.8999999999996 2453.21 2145.21 3312.8999999999996 3730.0 3929.9 True False 3513.105555245562 2696.8401457454383 3002.060094984105 3060.3346103483013 2895.08825653449 2470.289815257191 2898.926502135414 2449.300086930094 2562.5334396142043 2887.3904094024942 2953.9973702777193 1.1892717273865678 0.9129460211712699 1.0162704019949305 1.035997743647478 0.9800578313522023 0.8362532208432357 0.9813571708978441 0.8291476869865405 0.8674799325814188 0.9774519227588334 1.0 11.528452826442182 -7.0088377424397885 8.764825827271476 0.9236247917248702 1.0256925101778995 0.33282669791422226 0.08058977902940108 0.16534571388992333 117.82128113780698 0.012039194541592812 0.0218223888858453 9.798560028337546e-08 7.0088377424397885 0.10206771845302931 EAEEGPTGASESQDS(ph)PRK ddPTM_A549_PD325901_60min_R1 2 EAEEGPTGASESQDSPRK 18 1 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 EAEEGPTGAS(0.001)ES(0.024)QDS(0.976)PRK;EAEEGPTGASES(0.001)QDS(0.999)PRK 92.805 1.8481e-06 27524000.0 2281.26 2609.8999999999996 2704.1000000000004 2510.0 2480.5 2505.17 3000.2 3076.7 3417.7 3180.6000000000004 3736.2000000000003 True False 2512.8518358251486 2829.8454324448458 2887.616487074263 2665.036999376402 2306.278237260445 2484.7687261064657 3114.374252772436 3015.3328048755425 3274.065954371899 2979.776373195408 3276.6710857231797 0.7668916928445835 0.8636342673437065 0.88126528770493 0.8133367462447679 0.7038479532807416 0.7583210707149947 0.9504689885848205 0.920242748200661 0.9992049457259743 0.9093913594741397 1.0 11.678015146187342 -7.890384178826872 4.054477484433239 0.9916066194030357 0.8013552846572595 0.6385726946558654 0.05681216001365617 0.08810347872238235 2.682376411359505 0.008809040710217849 0.012349056098762076 1.287110464315294e-08 7.890384178826872 -0.19025133474577627 EAEFS(ph)DPENTR ddPTM_A549_MK2206_60min_R1 3 EAEFSDPENTR 11 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 EAEFS(0.999)DPENT(0.001)R;EAEFS(1)DPENTR;EAEFS(0.992)DPENT(0.008)R 102.4 0.00023121 13663900.0 2057.9 2263.7 2448.89 2031.17 2922.13 2592.5699999999997 2081.4300000000003 2123.2400000000002 2766.36 2789.02 2900.03 True False 2405.223209175542 2378.912660955545 2796.179425682955 2528.806741182686 2492.2885479222055 2866.9140365913136 2459.5988885336815 2424.2157721497924 2139.783876969166 2158.9784449414856 2179.8725142437447 1.103377923919545 1.09130815926676 1.2827261261436764 1.1600709328912273 1.1433184884148355 1.3151750929736925 1.1283223548451324 1.1120906182859125 0.9816096413837823 0.9904150040125131 1.0 11.090028048817304 -8.547452989870145 2.2991103579755316 0.9906968875886177 1.1797983556757115 0.5992979792680345 0.06564184733076624 0.138183208300643 1.4535287825010896 0.011387478972614992 0.013255656735495705 2.8349604866812966e-09 8.547452989870145 0.18910146808709372 EAEFS(ph)DPENTR ddPTM_A549_PD325901_60min_R1 4 EAEFSDPENTR 11 0 Q5T481 Q5T481 RBM20 RNA-binding protein 20 1 EAEFS(0.999)DPENT(0.001)R;EAEFS(1)DPENTR;EAEFS(1)DPENTR;EAEFS(1)DPENTR 117.86 1.6668e-05 19578500.0 4174.27 3244.14 3475.8599999999997 4046.9800000000005 4505.21 3627.7299999999996 3723.91 3790.0 3702.23 3900.55 4111.77 True False 4598.038817464844 3517.5350631103197 3711.752761644152 4296.95276324156 4188.779591730753 3598.1869696500453 3865.625432851741 3714.4054768025176 3546.6381479516285 3654.2686073279724 3606.048356657566 1.2750907261062774 0.9754542133679847 1.0293130858302086 1.191595990472072 1.1615982863894034 0.9978199440966989 1.0719838034659015 1.0300487152217193 0.9835248441424107 1.0133720477101704 1.0 11.816203027922164 -7.862687326334306 1.0967510208142932 0.9930155645755744 1.1117656365731188 0.2784342859792952 0.08021067166445241 0.43219162233327585 1.0471045651619362 0.013937555959602825 0.02214232407074477 1.3718690984539094e-08 7.862687326334306 0.11875007199754439 EAEGGRPPAAT(ph)SPAEVVWSSEK ddPTM_A549_MK2206_60min_R1 1 EAEGGRPPAATSPAEVVWSSEK 22 1 O75564;O75564-2 O75564 JRK Jerky protein homolog 1 EAEGGRPPAAT(0.5)S(0.5)PAEVVWSSEK 59.691 0.00069943 3181900.0 1929.2 1919.9 1403.2 1313.3 2223.3 2276.3 2088.9 2252.6 2919.9 2629.0 3010.2 True False 2254.801795588442 2017.614709444075 1602.1948597602677 1635.0585589562781 1896.2555151877002 2517.1765551143512 2468.426090840436 2571.9129482981766 2258.547312122163 2035.1070740802027 2262.684262706429 0.9965163203510513 0.8916907863365688 0.7080947554935746 0.722618964521617 0.838055731611251 1.1124736210891044 1.0909282092623547 1.1366645318962332 0.9981716624575284 0.8994215886073217 1.0 11.143819568158836 -7.190831226588185 7.502130376282377 1.0252304498826568 0.8209377361678128 0.5382002589013384 0.09534044094364923 0.18117233751939596 17.179438057879494 0.013911827541533446 0.024150341054445985 6.444196480939368e-08 7.190831226588185 -0.20429271371484392 EAELLT(ph)SAEKR ddPTM_A549_MK2206_60min_R1 1 EAELLTSAEKR 11 1 O60566;O60566-3;O60566-2 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 EAELLT(0.5)S(0.5)AEKR 45.973 0.024297 5812900.0 801.05 756.08 724.46 760.27 755.25 852.6 717.84 764.43 973.43 1154.9 1123.4 True False 936.247656207817 794.5612425212122 827.1993216233782 946.5361841298172 644.153725473625 942.8215660899245 848.2622361285363 872.7902934686913 752.9496592482882 894.0072878871157 844.4287757372934 1.1087349023490514 0.9409452464803315 0.9795963204843751 1.1209189114894516 0.7628277765773638 1.1165199400822428 1.004539708382031 1.0335866310413624 0.8916674572001263 1.0587124853798757 1.0 9.721831932251993 -8.742195713256763 24.955479274773417 0.948842953982759 1.0042785378241805 0.0 0.10394468350330255 524.9338370242549 680741.9829160005 0.016008736458141177 0.018138307040422234 1.8105240025756765e-09 8.742195713256763 0.055435583841421554 EAELLT(ph)SAEKR ddPTM_A549_PD325901_60min_R1 1 EAELLTSAEKR 11 1 O60566;O60566-3;O60566-2 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 EAELLT(0.511)S(0.489)AEKR 50.284 0.016541 9803000.0 2093.2 1590.0 1928.1 2011.8 2398.5 2819.6 2202.9 2902.2 1981.6 1818.5 2741.3 True False 2305.7001230676033 1723.9948801054861 2058.952460607185 2136.064316870696 2230.0376343758026 2796.6381124353998 2286.7325649731347 2844.3133442681446 1898.320243199624 1703.6795996528492 2404.137478532452 0.959055022292262 0.7170949646181871 0.8564204331043593 0.8884950781494432 0.9275832410952952 1.1632604779916913 0.951165474267726 1.183090971155438 0.7896055280326182 0.7086448320304959 1.0 11.231303682344276 -6.493847864314816 2.5816472497976775 0.9455512619753759 0.8319010900741189 0.11353475176251104 0.14056251441016734 0.4986349776506413 6.582977825577435 0.019755913332565152 0.04965352710706354 3.2073926945878575e-07 6.493847864314816 -0.11365017190125692 EAELLTS(ph)AEKR ddPTM_A549_PD325901_60min_R1 1 EAELLTSAEKR 11 1 O60566;O60566-3;O60566-2 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 EAELLT(0.172)S(0.828)AEKR 66.98899999999999 0.0020325 8325000.0 1606.9 2045.8 1783.1 2147.3 2355.7 2305.2 2212.6 2864.0 2208.9 2117.3 2269.9 True False 1770.0313050627433 2218.206745735724 1904.111888651352 2279.9338441278696 2190.2437587238164 2286.427215486625 2296.8017037811774 2806.875273235464 2116.067614656668 1983.613316659321 1990.7166900816442 0.8891427463694745 1.1142754550597302 0.9564956671826867 1.1452829302568233 1.1002287616496496 1.1485447562067974 1.1537561900317317 1.4099822878967008 1.062967736795276 0.9964317507068111 1.0 10.959072202407008 -5.254844556350878 23.733045018750047 1.0802095006519266 0.8891425659382236 0.18846518025922576 0.11819836840819796 533.127178239218 1918474.25674386 0.017032308601498104 0.2192756451756318 5.5610326337365586e-06 5.254844556350878 -0.19106693471370295 EAEMRNS(ph)ILAQVLDQSAR ddPTM_A549_MK2206_60min_R1 1 EAEMRNSILAQVLDQSAR 18 1 O14737;K7ESJ4;O14737-2 O14737 PDCD5 Programmed cell death protein 5 1 EAEMRNS(0.999)ILAQVLDQS(0.001)AR 40.196999999999996 0.029046 879610.0 491.5 585.81 363.92 398.86 856.39 603.54 656.76 470.61 578.74 552.85 694.29 True False 574.4531839787057 615.6252268031842 415.52932822402846 496.5807179055061 730.4161654529729 667.4062022025722 776.0847907608623 537.3204086826797 447.65631405787167 427.96080102899947 521.8786315708077 1.1007409562826005 1.1796329444457379 0.7962183218219198 0.9515252931717915 1.3995900986681253 1.2788532847067136 1.4870982328303366 1.0295888280870855 0.8577785848607491 0.8200389422745208 1.0 9.027570521493741 -8.516495185753984 24.75627648161979 0.9334105988308717 1.1679815844493322 0.2962468033054513 0.18598540049872606 287.4165629248564 1114641.119809297 0.033041242120944794 0.03812763925477118 3.0444217378931664e-09 8.516495185753984 0.23457098561846046 EAEMRNS(ph)ILAQVLDQSAR ddPTM_A549_PD325901_60min_R1 1 EAEMRNSILAQVLDQSAR 18 1 O14737;K7ESJ4;O14737-2 O14737 PDCD5 Programmed cell death protein 5 1 EAEMRNS(1)ILAQVLDQSAR 75.773 0.00013243 1369700.0 332.97 472.03 207.1 334.95 231.13 217.13 413.98 369.13 430.88 394.15 366.79 True False 366.7728692804416 511.8096246894291 221.15505139346914 355.6391007733571 214.89622615521336 215.36176526922205 429.7342354385481 361.76741257311716 412.7716120255624 369.26330173394 321.6771552733806 1.1401893583917577 1.5910661242153255 0.6875062396194043 1.1055777351397975 0.6680493862630115 0.6694966109302809 1.3359177933333006 1.1246288604662193 1.2831859684743985 1.1479313830045463 1.0 8.329469672721938 EAEQEAAR ddPTM_A549_PD325901_60min_R1 1 EAEQEAAR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 70.919 0.017644999999999997 2187200.0 455.38 270.82 511.68 459.96 343.61 303.52 159.27 302.04 375.69 428.56 493.17 False True 501.609842366962 293.6429518428728 546.4056817817976 488.37068455504766 319.4760189901476 301.04823375173527 165.33110700588816 296.0155752542038 359.9010557971676 401.5006484614928 432.5132164622073 1.1597561028768986 0.6789224945419237 1.2633271331017053 1.1291462687538962 0.738650304384544 0.696044010433241 0.38225677439000216 0.6844081613863686 0.8321157414356504 0.9282968315872855 1.0 8.756600408149886 -6.759936222373338 24.99998915641939 0.8316321149172634 1.0454075516468708 0.2826464918717304 0.21110595646380154 59.83745815005203 995162.4722640967 0.03396341691072659 0.06783370892650256 1.7380560494707387e-07 6.759936222373338 0.21377543672960742 EAERDMLPS(ph)PEQTLSPLSK ddPTM_A549_MK2206_60min_R1 1 EAERDMLPSPEQTLSPLSK 19 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 EAERDMLPS(0.947)PEQT(0.049)LS(0.003)PLSK 53.188 0.0026045 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAERDMLPS(ph)PEQTLSPLSK ddPTM_A549_PD325901_60min_R1 1 EAERDMLPSPEQTLSPLSK 19 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 EAERDMLPS(0.998)PEQT(0.001)LSPLSK 65.90100000000001 0.00053036 1493100.0 1197.1 1207.7 1021.5 1096.7 1349.0 1553.8 1051.6 1197.5 1491.8 1057.7 1354.7 True False 1318.6287107415578 1309.4771174235184 1090.8251327785072 1164.440668213586 1254.250893797356 1541.146367960747 1091.6192134575995 1173.614923079424 1429.104833874244 990.9166414917884 1188.0804881508452 1.109881631667818 1.1021787921638353 0.9181407687927706 0.9801025097432138 1.0556952212467523 1.2971733677399429 0.9188091415899101 0.9878244233318436 1.2028687013440766 0.8340484094929234 1.0 10.214416861476385 -7.001705988952966 24.990317972485137 1.090451189147855 1.0241892652211202 0.0 0.1334521631482145 166.5088010866284 2439203.956411692 0.017335952849552503 0.03243037982253779 9.960795204932475e-08 7.001705988952966 -0.0662619239267348 EAERY(ph)LPPS(ph)RREGPTFR ddPTM_A549_PD325901_60min_R1 1 EAERYLPPSRREGPTFR 17 3 E9PGM9;P78332;P78332-2;F8WCA5;C9JSL1;F8WF63 E9PGM9 RBM6 RNA-binding protein 6 2 EAERY(0.998)LPPS(0.956)RREGPT(0.047)FR 41.521 0.043966000000000005 48535000.0 15838.0 14483.0 13862.0 13767.0 14925.0 12705.0 13581.0 14549.0 13333.0 16307.0 14954.0 True False 17445.86210068064 15703.533238092927 14802.75867897764 14617.356322874486 13876.719488454797 12601.534692329331 14097.832386808366 14258.808781530295 12772.660376756461 15277.373237029964 13114.752801216317 1.3302471167479906 1.1973945278355926 1.1287104609096994 1.1145735298585888 1.0580999656484422 0.9608671153268411 1.0749598258154645 1.0872342771270438 0.9739154500549848 1.1648998245405797 1.0 13.67890299418091 -2.0000000000068874 0.3587136466337518 0.9901065149857324 5.265526012455813 0.5966571280524198 0.06508931772325438 13.016354324162418 0.15885024533173892 0.010203971272195246 38.52093818056752 0.009999999999841412 2.0000000000068874 4.2754194974700805 EAESLIAK ddPTM_A549_PD325901_60min_R1 2 EAESLIAK 8 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 ; 144.38 0.0025426 9665100.0 4498.799999999999 4959.0 4862.2 4160.1 5058.1 5171.0 5259.5 4951.3 5118.299999999999 5015.700000000001 5653.2 False True 4955.51486415848 5376.912333612014 5192.1781307838 4417.0599287274 4702.836505497705 5128.889090439587 5459.653150608835 4852.542437280292 4903.195650367699 4699.007846015285 4957.892238587407 0.9995204868693145 1.084515773005989 1.047255140072013 0.8909148719186161 0.9485556117769974 1.0344898282623627 1.1012044812342248 0.9787510909399816 0.9889677738870558 0.9477833764604205 1.0 12.27551119897799 -8.877920613088039 0.002712896998784366 5.1286338522505536e-05 2.0039320028059406 0.03767951543844983 0.058118480848247875 65257.15360936322 131.7822624653963 48746.390222319715 48590.30439238273 1.324583640491752e-09 8.877920613088039 2.003880716467418 EAESSPFVER ddPTM_A549_MK2206_60min_R1 1 EAESSPFVER 10 0 P14625 P14625 HSP90B1 Endoplasmin 0 63.076 0.018609 4280000.0 1877.5 2420.1 1723.9 2131.8 2624.3 2288.3 2705.4 1958.3 3415.4 3290.3 3334.5 False True 2194.376099532085 2543.2727529171334 1968.3749420900276 2654.09109570014 2238.26894638919 2530.446387149393 3196.9361607351784 2235.8950220422266 2641.8173532730675 2547.0189447874054 2506.451622481757 0.8754911045756905 1.0146905410442026 0.7853233329678415 1.058903779308614 0.8930030511312935 1.0095732007960632 1.2754828906570874 0.8920559255910794 1.0540069194143387 1.0161851607035928 1.0 11.291430673308891 -6.291860970843221 24.96396011080607 1.025523148655732 0.9041204895940257 0.22983047939823031 0.10784320601093406 727.7236906260468 597168.8685547323 0.014107890810895527 0.03278725452321319 5.106684522971583e-07 6.291860970843221 -0.12140265906170622 EAET(ph)KSPLVSPSK ddPTM_A549_MK2206_60min_R1 1 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 1 EAET(0.534)KS(0.436)PLVS(0.025)PS(0.005)K 72.433 0.00067973 15600000.0 3207.0 3940.7 3355.2 3342.0 5146.0 3495.0 3276.0 3504.4 5240.5 5140.0 4607.5 True False 3748.2631963778435 4141.264797909403 3831.0178117642895 4160.7901500280805 4389.0302168649805 3864.8385802067637 3871.206794769145 4001.159431774898 4053.53511735888 3978.870430114964 3463.3305894690952 1.082271270255037 1.1957463172882465 1.1061657883348521 1.2013840557640503 1.267285955955417 1.115931176757578 1.1177699312160017 1.1552923777883555 1.1704153018728307 1.1488566647993306 1.0 11.757944390078821 -10.76753183495072 0.6667242690425617 0.979956707029787 1.1612940457079592 0.017484705805468015 0.0664426427467561 0.5599811044634228 0.36271912727846223 0.059478965948817485 0.009984693522532525 1.7079225201679968e-11 10.76753183495072 0.18133733867817226 EAET(ph)PQAK ddPTM_A549_MK2206_60min_R1 2 EAETPQAK 8 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 EAET(1)PQAK;EAET(1)PQAK 96.009 0.0026447 465710000.0 11481.2 10022.1 9021.5 7259.2 11055.8 10706.8 9510.3 10063.2 10166.0 15182.8 16477.5 True False 13418.945871609996 10532.182082149822 10300.884355278837 9037.70432587787 9429.506465529703 11839.786469401355 11238.198406682839 11489.689417257485 7863.4172317661205 11752.994935087449 12385.681994135006 1.0834240599721736 0.850351404721769 0.8316767990778882 0.7296896795959638 0.7613231528142623 0.9559252752499097 0.9073540247524896 0.9276590035734972 0.6348796324247373 0.9489178666667565 1.0 13.596385689592541 EAET(ph)PQAK ddPTM_A549_PD325901_60min_R1 2 EAETPQAK 8 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 EAET(1)PQAK;EAET(1)PQAK 132.57 0.0011399000000000001 646550000.0 15152.1 13797.699999999999 13052.8 11991.6 13912.900000000001 12720.5 11099.3 12725.4 13163.0 14320.5 17117.5 True False 16690.330037613538 14960.48060203236 13938.641500862737 12732.293897100428 12935.705900899346 12616.908465468336 11521.689935270002 12471.581914116821 12609.80488556554 13416.301186048182 15012.156016772784 1.1117876751990696 0.9965577619442079 0.9284903171329535 0.8481322658034521 0.8616820852678682 0.8404461325456326 0.7674906870403589 0.8307655409511179 0.8399729440246194 0.8936958269723826 1.0 13.873843568455772 -5.472703423582957 1.7788168725657334 0.8905312701271986 1.136623101479019 0.6053166578573861 0.059496440096499424 0.4551670787789844 1.9484854048747862 0.011771583358485346 0.16274268559530586 3.3674144906373508e-06 5.472703423582957 0.24609183135182033 EAETKS(ph)PLVS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 2 EAET(0.071)KS(0.885)PLVS(0.599)PS(0.445)K;EAET(0.179)KS(0.821)PLVS(0.988)PS(0.012)K 60.763999999999996 0.0023092 26001000.0 8223.6 10121.7 8888.6 9112.6 11550.8 9420.1 7678.1 9249.3 12183.900000000001 12199.9 13589.7 True False 9611.542632283386 10636.85129672383 10149.137136876509 11345.187409080156 9851.69262125223 10416.928729443698 9073.11138306379 10560.416599793269 9424.266103690275 9443.93411680147 10215.00243336043 0.9409241647259673 1.0412969909811978 0.9935521017333468 1.1106397167394435 0.964433702832836 1.0197676209477748 0.8882143144119651 1.0338143988399626 0.9225906861179253 0.9245160907607046 1.0 13.31840192729133 -7.334704686770452 2.2925669207217707 0.964216475842168 1.0188442357398848 0.1683740414799888 0.056436100295368746 0.41789183029410154 4.292257587095937 0.008306056441042375 0.01451395303445365 4.6269553994343494e-08 7.334704686770452 0.05462775989771684 EAETKS(ph)PLVS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 2 EAET(0.069)KS(0.931)PLVS(0.593)PS(0.407)K;EAET(0.047)KS(0.953)PLVS(0.959)PS(0.04)K 70.555 0.00079074 54342000.0 8077.0 9862.1 10056.2 9647.0 11799.900000000001 8977.8 10011.5 9366.0 10851.8 9891.2 12264.8 True False 8896.971094026861 10693.213778042958 10738.674204843093 10242.873280073372 10971.115731445088 8904.687773380108 10392.493111003008 9179.187782515137 10395.73658415103 9266.667943957249 10756.307352972979 0.8271399098286079 0.9941342718407371 0.9983606689962228 0.9522666974779503 1.019970457464916 0.827857319539954 0.9661766598860329 0.8533772308001281 0.9664782013948039 0.8615101484057164 1.0 13.392895264331289 -9.097401434847976 3.8153010717236837 0.9867522848822139 0.9347944260661862 0.0 0.07503807538693216 0.32734655417835357 9.859806025318585 0.011551386080676377 0.01136345304100948 7.990952794781586e-10 9.097401434847976 -0.05195785881602766 EAETKS(ph)PLVSPSK ddPTM_A549_MK2206_60min_R1 2 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 1 EAET(0.059)KS(0.916)PLVS(0.024)PS(0.002)K;EAET(0.153)KS(0.847)PLVSPSK 102.78 3.6099999999999997e-05 32133000.0 6772.4 7732.299999999999 7308.5 6813.0 8878.0 6928.5 6934.6 6334.200000000001 10666.7 9062.8 8771.2 True False 7915.415550716958 8125.841042676396 8344.955197090872 8482.185305847195 7572.057960615487 7661.669271233921 8194.527057083675 7232.0922476739415 8250.709481219725 7015.507185612039 6593.068967195079 1.2005661688208384 1.2324823360877737 1.265716351309625 1.2865306503013592 1.1484876008868605 1.162079345651599 1.2429002484058516 1.0969234939992938 1.2514216857540115 1.0640730774270484 1.0 12.686734457499158 -11.000094654034429 0.6636786887928665 0.9559078327317443 1.2147586440353306 0.5881558382996861 0.05638329826100733 0.5633089568692426 0.3135789943771206 0.08977355428630787 0.010716110902964811 9.997820747804829e-12 11.000094654034429 0.25885081130358634 EAETKS(ph)PLVSPSK ddPTM_A549_PD325901_60min_R1 1 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 1 EAET(0.023)KS(0.977)PLVSPSK 155.1 7.0388e-19 45234000.0 12981.0 13574.0 13916.0 14252.0 16091.0 14471.0 13459.0 14379.0 14312.0 16080.0 17242.0 True False 14298.821563892872 14717.92861795715 14860.423443706022 15132.313671359558 14960.823670936426 14353.15297384476 13971.189610047393 14092.199564892726 13710.516411320665 15064.706055770039 15121.343306043325 0.9456052464716063 0.9733215045831974 0.9827449283402603 1.0007254888070591 0.9893845651237383 0.9491982744752873 0.9239383914036084 0.9319409843211948 0.906699632025495 0.9962544828771495 1.0 13.884298686759506 -7.273734816137892 22.56329102140813 0.9498271994025284 0.9795631719605092 0.1752546568584391 0.029029544260927714 337.32666303708106 619026.9455347768 0.00560292808471551 0.009004621188275668 5.324332682602727e-08 7.273734816137892 0.029735972557980883 EAEVT(ph)RTAR ddPTM_A549_PD325901_60min_R1 1 EAEVTRTAR 9 1 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 EAEVT(0.585)RT(0.415)AR 49.5 0.025031 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAEVTRT(ph)AR ddPTM_A549_MK2206_60min_R1 1 EAEVTRTAR 9 1 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 EAEVT(0.147)RT(0.853)AR 47.559 0.032244999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAEVTRT(ph)AR ddPTM_A549_PD325901_60min_R1 1 EAEVTRTAR 9 1 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 EAEVT(0.017)RT(0.983)AR 80.979 0.00052828 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAEYEES(ph)VAKEDQPAVPGETQGDSYFTGKK ddPTM_A549_PD325901_60min_R1 1 EAEYEESVAKEDQPAVPGETQGDSYFTGKK 30 2 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 EAEYEES(1)VAKEDQPAVPGETQGDSYFTGKK 108.6 2.6305999999999998e-15 6152600.0 2418.5 2527.2 3332.5 3686.6 3385.4 3505.4 3556.9 2990.3 3450.9 3211.8 3546.1 True False 2664.0243395944003 2740.176013209172 3558.663489950441 3914.3129091239252 3147.621182995973 3476.8531846116643 3692.2597759103637 2930.6561206550314 3305.8706738280107 3009.0063998707847 3109.952180579991 0.8566126373999656 0.8810990825904412 1.1442823822734045 1.2586408670740157 1.012112405666944 1.117976413374706 1.1872400479231084 0.9423476473224994 1.0629972687269686 0.9675410505217542 1.0 11.602676681940634 -5.6992544004433965 8.36693687123957 1.060612983594036 0.8665186136098296 0.42033679824511316 0.09268106889250238 0.2094070204201853 25.075863521401278 0.012656654141849053 0.04921730079712925 1.9986907362552986e-06 5.6992544004433965 -0.19409436998420648 EAFAQRPSSAPDLMCLS(ph)PDR ddPTM_A549_PD325901_60min_R1 1 EAFAQRPSSAPDLMCLSPDR 20 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 EAFAQRPSSAPDLMCLS(1)PDR 59.943000000000005 0.00032722 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAFEQPQT(ph)SSTPPRDLDSK ddPTM_A549_MK2206_60min_R1 1 EAFEQPQTSSTPPRDLDSK 19 1 A0A0A0MRF7;K7EIW3;P52564 A0A0A0MRF7 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.411)S(0.269)S(0.269)T(0.051)PPRDLDSK 60.747 0.0011279999999999999 17537000.0 6919.2 6886.4 5887.7 5851.5 7551.5 5998.4 4942.0 5942.8 8004.7 7403.5 7730.1 True False 8086.991801801546 7236.888345807422 6722.664392681389 7285.117762683821 6440.684353411562 6633.146706584331 5839.8974297158475 6785.2100990617055 6191.648230879231 5731.04420804594 5810.502830093338 1.3917886348695985 1.2454840067070703 1.1569849614157055 1.25378439279872 1.1084555918387018 1.1415787756320184 1.0050588736434773 1.1677492116379729 1.0655959409935905 0.9863250007149343 1.0 12.504447301836205 -2.000000000003685 0.21358386885877031 1.003506263827323 2.8111072546982836 0.785090519217399 0.055288553802145785 14.19406410477687 0.16270665524373756 0.03440284202514704 8.88319863022708 0.009999999999915148 2.000000000003685 1.8076009908709605 EAFEQPQTSS(ph)TPPRDLDSK ddPTM_A549_PD325901_60min_R1 1 EAFEQPQTSSTPPRDLDSK 19 1 A0A0A0MRF7;K7EIW3;P52564 A0A0A0MRF7 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.128)S(0.109)S(0.381)T(0.381)PPRDLDSK 48.255 0.0052618000000000005 44316000.0 2915.8 4050.3 3802.3 3933.5 4153.4 3533.8 3495.1 3984.4 3884.0 4270.2 4204.2 True False 3211.8098695014905 4391.632995529085 4060.34694308734 4176.4633613733395 3861.6795124521373 3505.0219044276573 3628.1079430921077 3904.9280162986684 3720.7689869738288 4000.5788432431086 3687.1100526196083 0.8710914032033225 1.1910772753877874 1.1012274885048672 1.1327200169699456 1.047345877215816 0.9506149408091084 0.9839977357102262 1.0590755254306297 1.009128811962178 1.0850174760584614 1.0 11.848274763203666 -7.00256759757945 24.654267014268196 1.0037283447929877 1.085044959005885 0.09194021363459803 0.08117231450157039 101.99745954311844 979408.6864151012 0.01011481700747129 0.01888103533370053 9.941053302321471e-08 7.00256759757945 0.08131661421289738 EAFEQPQTSST(ph)PPRDLDSK ddPTM_A549_MK2206_60min_R1 1 EAFEQPQTSSTPPRDLDSK 19 1 A0A0A0MRF7;K7EIW3;P52564 A0A0A0MRF7 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.021)S(0.042)S(0.177)T(0.759)PPRDLDS(0.001)K 95.195 7.355e-11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAFEQPQTSST(ph)PPRDLDSK ddPTM_A549_PD325901_60min_R1 1 EAFEQPQTSSTPPRDLDSK 19 1 A0A0A0MRF7;K7EIW3;P52564 A0A0A0MRF7 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 1 EAFEQPQT(0.023)S(0.028)S(0.176)T(0.772)PPRDLDSK 106.35 5.5897e-10 46148000.0 3247.9 3595.8 3867.7 4073.6 3531.5 4078.0 3855.7 4351.5 3852.5 4891.1 4488.5 True False 3577.6244170223936 3898.830685461197 4130.185380369484 4325.217020183154 3283.459623013611 4044.79012005659 4002.4307734199947 4264.705918814288 3690.59282242963 4582.275111279652 3936.442954945795 0.9088470118758923 0.9904451125254231 1.0492176382691558 1.0987627839872285 0.8341184314352205 1.027524129360154 1.0167633112506538 1.0833907585161522 0.9375451047227101 1.1640649092913757 1.0 11.94267685618966 EAFQLFDR ddPTM_A549_MK2206_60min_R1 2 EAFQLFDR 8 0 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;G3V1Y7 G8JLA2 MYL6 Myosin light polypeptide 6 0 ; 108.98 0.0047317 7147300.0 2326.4 2505.1000000000004 2122.0 2105.14 2663.7 2224.79 2269.93 2445.7 3340.4 3008.7 3469.8 False True 2719.0394449807964 2632.598889852778 2422.931508274865 2620.8993945033258 2271.873258582054 2460.2158011039205 2682.3468985501613 2792.385464642123 2583.804733522679 2329.0325803670994 2608.1528983917224 1.0425153550842248 1.0093729134806975 0.9289836917800826 1.0048871736467073 0.8710659792924601 0.9432789782458594 1.0284469519421924 1.0706371801913934 0.9906645945166568 0.8929816123139337 1.0 11.348812732178027 -7.758946136114824 24.999953040165096 1.004542097064599 0.9643010021254493 0.05214508958899655 0.05860280044091272 105.679127496799 1059640.7369738785 0.007574494681923267 0.01094955534693078 1.7420229164399953e-08 7.758946136114824 -0.040241094939149735 EAFQLFDR ddPTM_A549_PD325901_60min_R1 2 EAFQLFDR 8 0 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;G3V1Y7 G8JLA2 MYL6 Myosin light polypeptide 6 0 ; 111.06 0.0042822 11226600.0 4728.3 4370.299999999999 4851.9 4407.3 5032.5 4485.3 4380.5 3955.0 4751.3 4575.6 5116.5 False True 5208.31353520951 4738.600518569181 5181.179110844872 4679.528911295469 4679.0345611825005 4448.773203896476 4547.202324601577 3876.1144223625192 4551.6193840908245 4286.69583512322 4487.202936165796 1.1607038079850884 1.0560254541592446 1.154656739298727 1.0428609933327442 1.0427508244547148 0.9914357044207683 1.0133712224049864 0.8638152714516102 1.0143555905185049 0.9553157938486498 1.0 12.131600716810835 -6.652045800226495 1.4718232097722022 0.9947453420016168 1.1191348373136032 0.5924972107585136 0.05078584196641403 0.23792553930419888 1.0237998622737807 0.0073158357496347646 0.020629244115060976 2.2282001533003112e-07 6.652045800226495 0.1243894953119864 EAFSLFDKDGDGTITTK ddPTM_A549_MK2206_60min_R1 2 EAFSLFDKDGDGTITTK 17 1 F8WBR5;M0QZ52;G3V479;P0DP25;P0DP24;P0DP23;E7EMB3 F8WBR5 CALM2;CALM3;CALM1 0 ; 171.09 7.867499999999999e-30 18261900.0 7760.2 7635.5 7270.6 6755.0 9377.3 8000.1 7843.6 8115.2 10770.0 9854.3 10275.1 False True 9069.932041325645 8024.114336142623 8301.68040719285 8409.975303243475 7997.911592034191 8846.66527196341 9268.680590797092 9265.55445175768 8330.612196155922 7628.206785891418 7723.5090916666095 1.1743278778698891 1.0389208118885178 1.0748586307938794 1.0888800936762717 1.0355282161399475 1.1454204516323603 1.2000608118397462 1.1996560555298474 1.0786045691516508 0.9876607504899529 1.0 12.915040753776477 -9.755884007059093 1.17434292550895 1.0147864487300347 1.113544155673589 0.39290728666243535 0.05693059155390247 0.3596194531191999 1.0105385801446012 0.017506792786788045 0.01162211938674007 1.7543489971502474e-10 9.755884007059093 0.09875770694355435 EAFSLFDKDGDGTITTK ddPTM_A549_PD325901_60min_R1 2 EAFSLFDKDGDGTITTK 17 1 F8WBR5;M0QZ52;G3V479;P0DP25;P0DP24;P0DP23;E7EMB3 F8WBR5 CALM2;CALM3;CALM1 0 ; 170.61 8.250399999999999e-30 32172000.0 12550.5 11171.6 11300.6 10046.8 14148.2 11458.9 11237.2 10418.400000000001 12143.900000000001 12069.4 13057.7 False True 13824.617520810221 12113.069938733608 12067.526672028187 10667.36801806169 13154.479240640281 11365.582517586181 11664.837795231786 10210.596838923317 11633.534114549822 11307.336024223305 11451.685679580205 1.2072124495576448 1.057754314749726 1.0537773223680165 0.9315107239699172 1.1486937040279033 0.9924811801159058 1.0186131650497234 0.8916239167418029 1.0158796215734314 0.9873948989348971 1.0 13.483272357135737 -7.379900128618471 19.35283427974653 0.9980004274580202 1.069087291946136 0.28919727487051505 0.07193095706821365 4.598045610760145 733.0970486340968 0.010307000373105715 0.016476872995472173 4.1696525875863577e-08 7.379900128618471 0.07108686448811585 EAGAGGLAIAVEGPSK ddPTM_A549_MK2206_60min_R1 2 EAGAGGLAIAVEGPSK 16 0 Q60FE5;P21333-2;P21333;H0Y5C6 Q60FE5 FLNA Filamin-A 0 ; 147.18 4.9208999999999996e-14 2796900.0 2962.6000000000004 3578.2 3647.7999999999997 3138.9 5346.0 3575.6 3672.3 3723.3999999999996 4913.9 4861.3 5370.6 False True 3462.614451384159 3760.315096272091 4165.112891557517 3907.9306409105757 4559.610481803379 3953.9676187088116 4339.509374978856 4251.203352434267 3800.9094958858477 3763.1289536805207 4036.9317989805136 0.8577341961185987 0.9314784800728416 1.0317521075311142 0.9680447516843074 1.1294742415402863 0.9794487040151003 1.074952362602399 1.0530778234866056 0.9415342356900182 0.9321755087937975 1.0 11.97904349840552 -5.484099442685166 3.2865275469311097 0.9976607964032332 0.8615759919972823 0.3878217217939841 0.05763521377969474 0.22086133256587528 4.443877617112375 0.008102575578247378 0.056516808448309995 3.2802017601347485e-06 5.484099442685166 -0.13608480440595094 EAGELPT(ph)SPLHLLS(ph)PGTPR ddPTM_A549_PD325901_60min_R1 1 EAGELPTSPLHLLSPGTPR 19 0 H7C228;Q969R5-2;Q969R5-3;Q969R5 H7C228 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 2 EAGELPT(0.798)S(0.206)PLHLLS(0.838)PGT(0.159)PR 53.266000000000005 0.017242 1763300.0 387.99 395.87 208.2 301.01 564.3 351.82 159.24 338.07 230.02 416.76 415.84 True False 427.3784591768583 429.23135420588596 222.32970400830652 319.60270405668973 524.665514729316 348.95489456554935 165.2999653394715 331.3269286392155 220.35305931609696 390.44570247529344 364.69431622694907 1.1718813268011037 1.1769620065555821 0.609633038179709 0.8763577874292978 1.4386446165583149 0.9568421525615303 0.45325621482020967 0.9085058743636436 0.6042130340714479 1.0706108790363469 1.0 8.510543905173751 -7.53433137624049 24.94370272395539 0.7886896721633461 1.0439438263642895 0.1794847910098517 0.25074367088747146 284.09862730802206 618761.8395894093 0.03925526928596097 0.058251410884498804 2.9219220362805102e-08 7.53433137624049 0.25525415420094344 EAGELPT(ph)SPLHLLSPGTPR ddPTM_A549_PD325901_60min_R1 1 EAGELPTSPLHLLSPGTPR 19 0 H7C228;Q969R5-2;Q969R5-3;Q969R5 H7C228 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 EAGELPT(0.5)S(0.5)PLHLLSPGTPR 67.86399999999999 0.0013725999999999999 2861200.0 467.74 494.54 488.0 398.62 580.73 590.53 405.36 553.43 507.01 518.94 601.2 True False 515.2246204680113 536.216621388281 521.11861458239 423.24185206829543 539.9415282097392 585.7209194695978 420.78619662150305 542.3914044925638 485.70213287476895 486.17403983714564 527.2562113208005 0.9771807508485304 1.0169944134845454 0.9883593656999592 0.8027252083158121 1.0240591132291479 1.1108848163255214 0.7980677848581712 1.0287055758600718 0.9211880722240584 0.9220830962223429 1.0 9.042360375505277 -6.018784615649255 24.53485007932085 0.9590950851402084 0.9984849673915245 0.03932319861674405 0.0893226571687402 1739.5312816118683 2272035.579750183 0.011686135936484208 0.03153629898082712 9.57668900617692e-07 6.018784615649255 0.03938988225131612 EAGELPTS(ph)PLHLLS(ph)PGTPR ddPTM_A549_PD325901_60min_R1 1 EAGELPTSPLHLLSPGTPR 19 0 H7C228;Q969R5-2;Q969R5-3;Q969R5 H7C228 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 2 EAGELPT(0.478)S(0.53)PLHLLS(0.94)PGT(0.052)PR 48.641000000000005 0.0064023 1607600.0 258.0 153.32 168.2 427.07 327.34 292.54 333.64 401.38 354.31 368.32 240.78 True False 284.1919700704384 166.24081447658682 179.61506346876635 453.44914395365777 304.3487676616948 290.15765123132803 346.33685277481356 393.3741610234813 339.41958284621467 345.06421234211535 211.16558643017694 1.345825211743998 0.7872533459970537 0.8505887086301207 2.147362890039818 1.4412801479957502 1.374076411486065 1.6401197687073492 1.862870592095993 1.6073622060498272 1.6340930270672334 1.0 7.722230928202702 EAGELPTS(ph)PLHLLSPGTPR ddPTM_A549_PD325901_60min_R1 1 EAGELPTSPLHLLSPGTPR 19 0 H7C228;Q969R5-2;Q969R5-3;Q969R5 H7C228 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 EAGELPT(0.058)S(0.942)PLHLLSPGTPR 70.944 0.00030006 2496800.0 615.42 513.67 662.02 637.91 522.0 589.16 500.09 624.7 792.65 564.57 655.47 True False 677.8969853517409 556.9587736250215 706.9486582496597 677.3122519012753 485.33652080223845 584.3620762953751 519.1211986097479 612.2398684323302 759.337677014626 528.9229538498812 574.851345366675 1.1792561517262121 0.9688744370420834 1.2297938657492835 1.178238961012163 0.8442817864376075 1.0165446789076116 0.9030529419368776 1.0650403332392073 1.320928763818539 0.9201038809650904 1.0 9.16704511795407 -8.546068354471739 24.95231386200766 1.1537304795128265 1.0416412199526746 0.0 0.14870661856534528 413.9272727404686 445388.72861336224 0.026570053412633923 0.030128290395318776 2.8440134472903613e-09 8.546068354471739 -0.11208925956015192 EAGENAPVLS(ph)DDELVSMSVR ddPTM_A549_MK2206_60min_R1 2 EAGENAPVLSDDELVSMSVR 20 0 O60675 O60675 MAFK Transcription factor MafK 1 EAGENAPVLS(1)DDELVSMSVR;EAGENAPVLS(0.966)DDELVS(0.017)MS(0.017)VR 87.85 4.9135000000000005e-06 1814600.0 410.28 208.82 261.34 435.03 419.37 453.81 251.51 362.58 735.41 607.56 569.88 True False 479.52523361705653 219.4480460576653 298.40194174012856 541.6123695292387 357.68122853607974 501.831872985302 297.2061114018277 413.97682535468005 568.8408092084524 470.3117740312545 428.363068112132 1.1194364531246934 0.5122945052775201 0.6966098712833393 1.2643769032568923 0.8349954866847905 1.1715105954324199 0.6938182432758849 0.9664157724407603 1.327940832330456 1.0979279238614046 1.0 8.742690291365514 -7.182656270111003 0.5717913172221083 1.1370641932264292 0.7919571520366507 0.10132092194332842 0.23460838402485581 1.1837072322760567 0.7079748182080768 0.054568624551880905 0.18312945739548653 6.566647894029788e-08 7.182656270111003 -0.3451070411897784 EAGENAPVLS(ph)DDELVSMSVR ddPTM_A549_PD325901_60min_R1 4 EAGENAPVLSDDELVSMSVR 20 0 O60675 O60675 MAFK Transcription factor MafK 1 EAGENAPVLS(1)DDELVSMSVR;EAGENAPVLS(0.999)DDELVS(0.001)MS(0.001)VR;EAGENAPVLS(0.999)DDELVSMSVR;EAGENAPVLS(1)DDELVSMSVR 286.46 3.0099999999999994e-127 23215900.0 5321.2 5251.82 4911.23 5311.03 6560.46 6220.200000000001 6169.38 6623.38 6089.06 5966.969999999999 6944.139999999999 True False 5861.404306739601 5694.40930266389 5244.535601425143 5639.080260875722 6099.675921958338 6169.544753500736 6404.159131914272 6491.271489958904 5833.15798347654 5590.214495870527 6090.054802530309 0.9624551004539882 0.9350341642735243 0.861163942112004 0.9259490174920569 1.0015798083498415 1.013052419649393 1.0515766014541377 1.0658806366179 0.9578169938722008 0.9179251545565554 1.0 12.572239495221112 -6.729260714407306 6.2269560707199725 0.9955575532612067 0.9172016800965237 0.42771102319246956 0.04415723938943339 0.13652922066170006 15.280465651564837 0.006164176843440841 0.01272868837878264 1.865259607412886e-07 6.729260714407306 -0.07835587316468295 EAGITEK ddPTM_A549_MK2206_60min_R1 1 EAGITEK 7 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3 P60174 TPI1 Triosephosphate isomerase 0 75.692 0.049907 13229000.0 4085.6 5192.6 4881.2 4104.5 5893.7 4612.8 4995.7 4582.7 5996.6 6460.8 6059.7 False True 4775.149396670194 5456.881160612171 5573.427558054315 5110.102684258008 5026.744537337182 5100.923434271173 5903.354024611789 5232.311758930146 4638.379674602475 5001.300792779525 4554.909250788038 1.048352257697352 1.1980219275868305 1.2236089131940588 1.121889021910572 1.1035882957421188 1.1198737786902495 1.296042072318007 1.1487192106022557 1.01832537581292 1.098002291025723 1.0 12.153206595606587 -8.758902734136173 5.090126830318526 1.008088841072123 1.162082614802943 0.3548481261562204 0.06805863428113128 0.09609079212429424 6.920492297962713 0.010670415578794678 0.011704254705438535 1.7421970172464214e-09 8.758902734136173 0.15399377373082013 EAGITEK ddPTM_A549_PD325901_60min_R1 2 EAGITEK 7 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3 P60174 TPI1 Triosephosphate isomerase 0 ; 96.25299999999999 0.032663 43561000.0 12526.8 12494.6 13576.8 12711.400000000001 14479.0 13403.7 13174.599999999999 13094.7 13538.4 13379.8 14053.2 False True 13798.511514257247 13547.56379180251 14498.203291930713 13496.554308316025 13462.044989838338 13294.544711182576 13675.966612417746 12833.515935906584 12969.428129054206 12534.997144589042 12324.745490574647 1.119577805871096 1.0992165154374192 1.1763491021391248 1.0950777294863832 1.0922777269626736 1.078687160018808 1.109634809325389 1.0412804017511776 1.0523079879395951 1.0170593100015888 1.0 13.589270234406026 -8.4953162736491 0.29290983192499465 0.9915235067257266 1.1420859647872705 0.7507115992682973 0.02385218920953905 0.47770304419040577 0.1298681589781289 0.021524926376805035 0.024581908889616255 3.1965663720083395e-09 8.4953162736491 0.1505624580615439 EAGNEPPT(ph)PR ddPTM_A549_MK2206_60min_R1 2 EAGNEPPTPR 10 0 H7C112;H3BPZ0;Q6PCT2-2;Q6PCT2-3;Q6PCT2 H7C112 FBXL19 F-box/LRR-repeat protein 19 1 EAGNEPPT(1)PR;EAGNEPPT(1)PR 52.693000000000005 0.024023 5346500.0 914.3699999999999 887.5 824.8199999999999 506.01 796.1800000000001 843.1199999999999 542.21 599.0799999999999 1047.67 1289.87 1104.6599999999999 True False 1068.6933017998144 932.6699591810071 941.7918787253878 629.982472715652 679.0629766932682 932.3383987822389 640.7225385200786 684.0014246055542 810.3744177852067 998.4874711463794 830.3424349349822 1.287051289729033 1.123235330317711 1.1342210624212317 0.7587020080034583 0.8178107586979346 1.1228360247001505 0.7716365099059989 0.8237582421752457 0.9759520695201624 1.2025008347604966 1.0 9.697562619365844 -6.063956376167348 8.419265054715924 0.9460465581191413 1.1865426033061865 0.38920733628536974 0.13878314329010905 0.23859442632579184 29.57458438323685 0.016525756109835782 0.044069689316508655 8.63065236233273e-07 6.063956376167348 0.24049604518704526 EAGNEPPT(ph)PR ddPTM_A549_PD325901_60min_R1 2 EAGNEPPTPR 10 0 H7C112;H3BPZ0;Q6PCT2-2;Q6PCT2-3;Q6PCT2 H7C112 FBXL19 F-box/LRR-repeat protein 19 1 EAGNEPPT(1)PR;EAGNEPPT(1)PR 78.548 0.0014023 5791900.0 1128.3 1266.27 921.39 985.37 1167.46 1110.1 1038.55 1306.02 1321.94 1374.9 1418.43 True False 1242.8441853894406 1372.9830168749506 983.9210661681731 1046.2340669623607 1085.4616371183545 1101.0597136524814 1078.0725885663664 1279.970406547131 1266.3834589701812 1288.088579358098 1243.9721021686016 0.9990932941525017 1.1037088488411 0.7909510707297337 0.8410430307387708 0.8725771544442855 0.8851160823727616 0.8666372715971488 1.0289381926779337 1.0180159641542685 1.0354642014178523 1.0 10.280738416019416 -8.26876610348015 24.6594646654846 1.0102775497820122 0.9065683246670169 0.31252295379161943 0.07945516706310306 490.3707590826654 1650432.1709964168 0.01348477765297024 0.016479223837722233 5.385597547420977e-09 8.26876610348015 -0.10370922511499536 EAGNS(ph)FVR ddPTM_A549_MK2206_60min_R1 3 EAGNSFVR 8 0 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 EAGNS(1)FVR;EAGNS(1)FVR;EAGNS(1)FVR 97.456 0.0024593 45916000.0 3245.67 4290.139999999999 3380.7200000000003 3541.63 4467.4400000000005 2922.5299999999997 2989.3100000000004 3453.4700000000003 5101.55 5298.700000000001 5289.8 True False 3793.4597469871114 4508.489801330486 3860.1569315056545 4409.329508989811 3810.285493981982 3231.7901847815933 3532.428932744616 3943.0099483083104 3946.0570705013242 4101.719989893026 3976.196668947067 0.9540422828208983 1.133869920605405 0.9708163989101322 1.1089314428095032 0.958273901223045 0.812784289575244 0.8883939168129817 0.9916536521198926 0.9924199930347701 1.0315686902326184 1.0 11.957173401295075 -6.793578362694575 24.980566074312744 0.9713405465859617 1.043404821982267 0.21817295878262 0.07581625849088656 264.81553503197364 205831.59252041153 0.011147949156513301 0.021068830023785297 1.6085021187722063e-07 6.793578362694575 0.07206427539630522 EAGNS(ph)FVR ddPTM_A549_PD325901_60min_R1 2 EAGNSFVR 8 0 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 EAGNS(1)FVR;EAGNS(1)FVR 74.84100000000001 0.0049503 42753000.0 2395.5699999999997 2285.27 1660.55 1940.18 2598.8900000000003 1895.48 2256.25 2409.6400000000003 2023.3600000000001 2123.11 2348.58 True False 2638.766502874575 2477.8577230557626 1773.244908698334 2060.020512131519 2416.3529320837733 1880.0438393243908 2342.1128284173737 2361.5778398739903 1938.3252156239375 1989.056472267782 2059.7195488752577 1.281129027646271 1.2030073338910803 0.8609157055710047 1.000146118560862 1.1731465739611302 0.9127669057425892 1.137102781636617 1.1465531029035323 0.9410626882103393 0.9656928650087035 1.0 11.008232198288475 -5.606653711829001 6.505167625894007 1.0002399459523144 1.2621707373773314 0.4525989744558143 0.09646344817601815 0.11448163304875364 7.016545849770034 0.013164344310094061 0.05239437924284152 2.4736957799335207e-06 5.606653711829001 0.2619307914250171 EAGRPGVLQAPPGS(ph)PRPLDRPEGLR ddPTM_A549_MK2206_60min_R1 2 EAGRPGVLQAPPGSPRPLDRPEGLR 25 3 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 EAGRPGVLQAPPGS(1)PRPLDRPEGLR;EAGRPGVLQAPPGS(1)PRPLDRPEGLR 75.26100000000001 1.1141e-06 11262000.0 1663.1 1646.31 1459.97 1663.9499999999998 1658.05 1337.4099999999999 1294.1599999999999 1507.15 2219.6000000000004 2014.2400000000002 2730.1000000000004 True False 1943.7906211088207 1730.1001470414476 1667.0156994043602 2071.6178246975533 1414.1530414055535 1478.9338384990917 1529.292120121623 1720.793127953298 1716.8641439728597 1559.2217850495651 2052.1408230731595 0.9472013807502352 0.8430708690111024 0.8123300704617047 1.0094910648457478 0.6891111104586892 0.7206785333008149 0.7452179221460297 0.8385355959033768 0.8366210177534453 0.7598025279349839 1.0 11.002914020372303 -10.37259048118705 0.778594355716798 0.9983344220617987 0.8228409295388295 0.0 0.11229259611062185 0.5751133407870367 0.642927443703046 0.056807477007721145 0.01783167322521474 4.240426293972756e-11 10.37259048118705 -0.1754934925229692 EAGRPGVLQAPPGS(ph)PRPLDRPEGLR ddPTM_A549_PD325901_60min_R1 2 EAGRPGVLQAPPGSPRPLDRPEGLR 25 3 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 EAGRPGVLQAPPGS(1)PRPLDRPEGLR;EAGRPGVLQAPPGS(1)PRPLDRPEGLR 93.77600000000001 2.7904000000000002e-09 24677000.0 1432.7 1513.07 1707.83 1169.79 1812.7199999999998 1319.81 1217.03 1236.7 1455.54 1611.8899999999999 1831.77 True False 1578.1466493020048 1640.581719019627 1823.7336138160717 1242.0452715141528 1685.4008007445086 1309.0619049416114 1263.3447426343691 1212.0330483276182 1394.3687155766968 1510.1149903131322 1606.473902546744 0.982366813927178 1.0212314787179622 1.1352401124754692 0.7731499836661757 1.0491305199995105 0.8148665862958339 0.7864085066253413 0.7544679352750029 0.8679684826290693 0.9400183768433126 1.0 10.649681828825155 -6.251752054107968 24.994217565548464 0.9028995853799917 1.043774661051735 0.354198835690148 0.09827693914997651 745.8076327778723 1924250.014395796 0.014996540438439331 0.03914489016878196 5.600772675967693e-07 6.251752054107968 0.1408750756717434 EAGS(ph)EPAPEQESTEATPAE ddPTM_A549_PD325901_60min_R1 1 EAGSEPAPEQESTEATPAE 19 0 H0Y8P7;Q6UN15;Q6UN15-5;Q6UN15-3 H0Y8P7;Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 EAGS(1)EPAPEQESTEATPAE 50.608000000000004 0.015665000000000002 1372900.0 0.0 0.0 0.0 0.0 0.0 143.81 0.0 0.0 229.07 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 142.63885904005355 0.0 0.0 219.4429845123829 0.0 0.0 0.0 EAGS(ph)IVR ddPTM_A549_PD325901_60min_R1 1 EAGSIVR 7 0 A0A590UK02;A0A590UJD9;A0A0C4DFT3;A0A590UK70;Q12959-9;A0A590UJ81;A0A590UJX2;A0A590UJS9;A0A590UJ68;Q12959-8;Q12959-5;Q12959-3;Q12959-6;A0A590UJ18;Q12959;A0A590UJR5;A0A590UJR4;Q12959-7;A0A590UJ29;E7EQD7;A0A590UKA8;A0A590UK81;A0A590UJ64;A0A590UK48;H7C166;E9PN83;A0A3B3ISW2;A0A3B3ITF1;B7Z2T4;A0A590UK52;A0A590UJ86;E9PIW2;Q6ZSU2;O14909;A0A590UJ95;A8MUT9;K7EKU8;B4E2H8;A0A590UJZ4;Q15700-4;K7EKP9;Q15700-2;Q15700-3;Q15700;A0A3B3ITI9;C9JWP9;C9JYG3;F8VYC1;C9JN61;A0A590UJ25;A0A590UJL2;A0A590UJ08;A0A590UJC5;Q12959-4;Q12959-2;A0A3B3IU19;A0A3B3ISR0;B7Z647;B7Z3U2;A0A3B3IS17;A0A3B3ISQ5;B9EGL1;P78352-3;P78352;P78352-2 A0A590UK02;A0A590UJ25;A0A3B3IU19 DLG1;DLG2;DLG4 Disks large homolog 1;Disks large homolog 2;Disks large homolog 4 1 EAGS(1)IVR 59.35 0.030527 3123900.0 601.47 529.15 753.29 769.89 581.7 766.32 527.68 788.66 844.14 675.14 632.36 True False 662.5307916211888 573.7433275520866 804.4127893007548 817.4443567529476 540.8433987560578 760.0793439925858 547.7611511575757 772.9295576081989 808.6637313759244 632.5115451798865 554.583728860315 1.1946452034983213 1.0345477115441977 1.450480328649103 1.473978254704332 0.9752240655662691 1.3705402889381015 0.9876978401137735 1.393711206054658 1.4581454328596168 1.14051587211135 1.0 9.115261479003017 -11.08552302690111 1.4360728007833232 1.0011613122750778 1.2817506553994762 0.11182521236203857 0.18643763206833444 0.49138806570538274 1.8223663198924887 0.13017456886524642 0.029087775497143108 8.212530076965611e-12 11.08552302690111 0.2805893431243984 EAGS(ph)PAQEFK ddPTM_A549_MK2206_60min_R1 2 EAGSPAQEFK 10 0 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EAGS(1)PAQEFK;EAGS(1)PAQEFK 174.46 1.1679e-10 131239000.0 7599.5 8285.8 8080.7 7443.299999999999 11781.1 10098.9 9977.9 10032.7 13648.9 11734.900000000001 12160.7 True False 8882.109810063426 8707.511828486744 9226.66476857525 9266.908834142434 10048.115796328806 11167.55889489272 11790.75527397041 11454.865948855151 10557.445942814546 9083.977939758 9140.862571754064 0.9716927412856854 0.9525919200878914 1.0093866630361912 1.01378931817418 1.099252473981856 1.2217182795638233 1.2898952567566992 1.2531493454733176 1.1549726144486439 0.9937768857643872 1.0 13.158114595380368 -6.679196373601163 2.8443964474045544 1.1186819432541508 0.978636741617714 0.39786458048050766 0.09082391537159079 0.29807276176350206 4.872166706350038 0.016201354352972902 0.03609683317969419 2.093165781501123e-07 6.679196373601163 -0.14004520163643686 EAGS(ph)PAQEFK ddPTM_A549_PD325901_60min_R1 2 EAGSPAQEFK 10 0 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EAGS(1)PAQEFK;EAGS(1)PAQEFK 154.23 1.7683e-08 159351000.0 29055.0 28573.7 25063.9 26616.2 28557.0 24452.5 22365.4 25379.4 25517.7 27675.9 30736.0 True False 32004.642210839498 30981.705978408878 26764.886975474506 28260.222224224 26551.25483630175 24253.36694720055 23216.527535816487 24873.187957245857 24445.27980919211 25928.438950801363 26955.66685155709 1.1873066389745337 1.1493578010524799 0.9929224575621448 1.048396330903294 0.98499714299474 0.8997502113660215 0.861285593996551 0.9227443006407783 0.9068697852592741 0.9618919499779918 1.0 14.718300980141802 -5.680791331177953 0.8937145772989773 0.9430365522060046 1.2548499567953446 0.7820624694549767 0.04555519120670042 0.5295557197842834 0.4612401230327532 0.008471068136860205 0.13877142212600235 2.085492675172227e-06 5.680791331177953 0.31181340458934004 EAGT(ph)PSLDSEAK ddPTM_A549_MK2206_60min_R1 1 EAGTPSLDSEAK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAGT(0.975)PS(0.025)LDSEAK 186.13 2.8326000000000004e-19 18684000.0 3788.6 4673.4 3932.6 3522.6 4703.4 3858.9 3900.7 3371.2 5104.7 5429.1 6254.5 True False 4428.0230576230415 4911.256098294671 4490.301814063018 4385.637158135524 4011.5360905563057 4267.246236669492 4609.406698521371 3849.0779238670034 3948.493600530842 4202.662539326295 4701.335034581541 0.9418650287741456 1.0446513728906826 0.9551120651971773 0.9328493132006458 0.8532759441836646 0.907666908501728 0.9804463337788153 0.8187201923611905 0.8398664573970938 0.8939295983827641 1.0 12.19885478065984 -6.1353709375668375 3.05095598802478 0.9133410624930395 0.9939232952707424 0.26300494369238925 0.05742448088553612 0.3523231452727798 6.204998687328082 0.010079636901284224 0.030768411585614587 7.321988837106776e-07 6.1353709375668375 0.08058223277770293 EAGT(ph)PSLDSEAK ddPTM_A549_PD325901_60min_R1 2 EAGTPSLDSEAK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAGT(1)PSLDSEAK;EAGT(0.997)PS(0.003)LDSEAK 215.02 1.1323e-31 53683000.0 17210.5 17964.4 18172.5 19177.9 19769.6 18748.8 18468.7 19992.4 21042.5 21160.2 23680.0 True False 18957.69729029953 19478.323034067296 19405.79513011984 20362.475326828968 18381.05149741749 18596.115988944824 19171.536484960427 19593.635898265606 20158.156902264895 19824.141360777667 20767.510119887826 0.9128536440266306 0.9379228863557432 0.9344305127621462 0.980496709007452 0.8850869165974325 0.8954427315355641 0.9231504583017379 0.9434754472324504 0.9706583401618575 0.9545747779264713 1.0 14.342040636992587 -8.889617511625099 1.323807823750028 0.9904224041297157 0.9246813953395125 0.39877971183064975 0.026097434483741258 0.20883774672383187 0.7313948507131234 0.005265755522821912 0.00533210212364556 1.2893846283357847e-09 8.889617511625099 -0.06574100879020317 EAHS(ph)DENPSEGDGAVNKEEK ddPTM_A549_PD325901_60min_R1 2 EAHSDENPSEGDGAVNKEEK 20 1 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 EAHS(1)DENPSEGDGAVNKEEK;EAHS(1)DENPSEGDGAVNKEEK 96.79299999999999 5.7567e-07 16715000.0 5279.9 5195.8 5208.6 5285.0 6377.4 6076.200000000001 5116.5 4583.4 5511.799999999999 5634.1 6446.9 True False 5815.9115611430525 5633.668300661683 5562.086917856221 5611.4424468941415 5929.473424835623 6026.7174417576925 5311.211207356231 4491.980491392256 5280.158213800812 5278.361964478478 5653.972170266251 1.0286417028595272 0.9964089194298932 0.9837485488709607 0.9924779036593477 1.0487270269949698 1.065926265688338 0.9393769632060501 0.7944822429468599 0.9338847194134958 0.933567022532747 1.0 12.46504906667842 -7.784258998463344 24.98715747290858 0.9501360104815609 1.0167797137288743 0.4025278282589617 0.05480729857273294 283.9709556868993 310943.0804095115 0.009902729416995583 0.013687631529199296 1.643391368180782e-08 7.784258998463344 0.06664370324731339 EAHS(ph)PGPLVKPFETASVK ddPTM_A549_MK2206_60min_R1 1 EAHSPGPLVKPFETASVK 18 1 D6RIS4;P35548 D6RIS4 MSX2 Homeobox protein MSX-2 1 EAHS(1)PGPLVKPFETASVK 51.833999999999996 0.0065412 5605700.0 1251.4 1302.3 985.11 1435.8 1783.7 1109.1 888.12 1323.6 2052.1 1583.5 1959.7 True False 1462.6057262074307 1368.5815074269592 1124.8134109880548 1787.5710644555106 1521.3200928531028 1226.4642258390038 1049.479907988515 1511.2243533549974 1587.3026265303217 1225.7862502114874 1473.0524050314887 0.992908141768497 0.9290786279919917 0.7635936149630809 1.2135149152533367 1.0327671219684695 0.8326005386161305 0.7124525267423061 1.0259135032760038 1.0775601880208674 0.8321402864043281 1.0 10.524593040992526 -8.48538792259513 24.981907386286508 1.037421040022357 0.9264524069516357 0.0 0.1428316699424791 864.8856830751001 576315.3071403977 0.021670582085257312 0.026194948044080082 3.270484366027039e-09 8.48538792259513 -0.11096863307072125 EAHS(ph)PGPLVKPFETASVK ddPTM_A549_PD325901_60min_R1 2 EAHSPGPLVKPFETASVK 18 1 D6RIS4;P35548 D6RIS4 MSX2 Homeobox protein MSX-2 1 EAHS(1)PGPLVKPFETASVK;EAHS(1)PGPLVKPFETASVK 148.89 2.1744e-17 20878000.0 2326.8900000000003 1737.67 2615.7 2545.4 2351.3 2781.1000000000004 2656.9 2218.8 2900.7 2299.7 2540.0 True False 2563.114159834118 1884.1095492533948 2793.2171314818797 2702.623576977169 2186.152799544641 2758.4516436707654 2758.009783411466 2174.5442933850736 2778.793666455971 2154.4965495307433 2227.5961023866166 1.1506188923063887 0.8458039351185724 1.2539154330936673 1.2132466806175564 0.9813955039705924 1.2383087044888421 1.238110347049257 0.976184278224987 1.247440531736794 0.9671845570309827 1.0 11.121271958135804 -5.769087992878037 24.99918495182622 1.1300776231474403 0.9982114009660563 0.1157754754035899 0.133182042038482 231.19857633656724 755674.1919082651 0.017838549216204893 0.056998964569234395 1.7018136671409847e-06 5.769087992878037 -0.131866222181384 EAIEGTYIDKK ddPTM_A549_MK2206_60min_R1 2 EAIEGTYIDKK 11 1 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ; 99.75200000000001 0.00027524 15402300.0 4262.8 4848.8 4877.0 4410.299999999999 5696.7 4914.8 5459.5 4859.9 6917.4 6681.7 7008.5 False True 4982.256424546135 5095.583209100697 5568.631934899393 5490.823697985892 4858.722976372857 5434.880873819796 6451.420481087349 5548.805707819546 5350.619944817921 5172.29932935781 5268.096025240183 0.9457413837324623 0.9672532893643258 1.057048297566958 1.0422785901545055 0.9222920298138146 1.031659416946943 1.2246208972231512 1.053284845461139 1.0156648472583558 0.981815689117397 1.0 12.363065927499342 -7.419140013698458 23.268836600873776 1.0310179555504728 0.991218378807032 0.13499454345262463 0.07130681878978892 50.174199425914914 11232.1799665941 0.011372582441044334 0.01818032300593907 3.809429900678249e-08 7.419140013698458 -0.03979957674344081 EAIEGTYIDKK ddPTM_A549_PD325901_60min_R1 2 EAIEGTYIDKK 11 1 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ; 125.54 2.9663999999999997e-06 32123000.0 10741.3 9744.1 9843.8 11042.900000000001 12225.7 11642.099999999999 10717.7 11488.0 11058.6 10903.2 11056.0 False True 11831.748868672863 10565.269503921927 10511.85946357813 11724.994852754462 11367.009008375335 11547.290597525945 11125.567938450482 11258.862827838342 10593.845499317402 10214.77009124825 9696.182089758435 1.2202482130745167 1.0896319196688213 1.084123561858564 1.20923831093673 1.1723180219956582 1.1909110710413267 1.147417389180617 1.161164541219836 1.0925790585664765 1.0534837317089552 1.0 13.243201076864533 -9.515115197096508 0.7325377720037982 1.0113928698908128 1.1595026431057331 0.567342626153459 0.043937265347050086 0.2602998398835251 0.30228269001557495 0.016096377775812024 0.010036187888746457 3.0541108994371566e-10 9.515115197096508 0.14810977321492036 EAIEMHENGS(ph)TK ddPTM_A549_MK2206_60min_R1 2 EAIEMHENGSTK 12 0 H7C4K2;H7C4M4;Q9ULI3 H7C4K2 HEG1 Protein HEG homolog 1 1 EAIEMHENGS(0.768)T(0.232)K;EAIEMHENGS(0.791)T(0.209)K 61.443999999999996 0.0019874000000000003 19741200.0 4772.9 5787.299999999999 4359.4 4207.8 7166.799999999999 5133.700000000001 5612.9 5114.4 7551.299999999999 7600.2 7405.299999999999 True False 5578.448833798503 6081.8488504430925 4977.628471806519 5238.711188895322 6112.573213802551 5676.944726525739 6632.6912754455825 5839.381862193109 5840.94260694821 5883.309541431855 5566.359634117306 1.0021718323061808 1.092607961075 0.8942340773847348 0.9411377512847423 1.098127612225663 1.0198666812202781 1.1915671482655417 1.0490486145383773 1.0493290033126732 1.0569402496690836 1.0 12.44251840669783 -6.753985469987199 24.99750164392213 1.042773744135644 0.9840926463819623 0.21904567279620957 0.06732757019398254 277.3717421293395 930187.9864839122 0.010024835275098468 0.020540742446333807 1.7620349971094892e-07 6.753985469987199 -0.05868109775368169 EAILAIHK ddPTM_A549_PD325901_60min_R1 2 EAILAIHK 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 73.248 0.005668899999999999 28192000.0 7505.799999999999 7432.200000000001 9307.099999999999 9891.7 10629.9 12576.1 9433.3 9582.3 13045.7 9672.3 10674.8 False True 8267.783290522078 8058.537577308168 9938.73577413885 10502.68784331935 9883.292495164198 12473.684411192666 9792.289393599829 9391.173509331076 12497.434596643789 9061.58932731496 9361.867273132537 0.8831339998004083 0.8607831474427359 1.0616189574340429 1.1218582294432689 1.055696711651541 1.3323927852502973 1.0459760972794983 1.003130383645007 1.3349296921256257 0.9679254216005241 1.0 13.192580596202998 -5.900246409934991 2.1252945074243947 1.1462170664228486 0.8585894129574496 0.31482965145545894 0.12229334090027794 0.26901183650951593 2.335794129637397 0.01952059693191824 0.09048300055025754 1.2582113254898235e-06 5.900246409934991 -0.287627653465399 EAIS(ph)DEDEDEALYQK ddPTM_A549_MK2206_60min_R1 2 EAISDEDEDEALYQK 15 0 Q9C0B7 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog 1 EAIS(1)DEDEDEALYQK;EAIS(1)DEDEDEALYQK 188.25 1.6613e-33 6195400.0 2195.9 2557.3 2161.0 2000.98 3034.2 3115.0 2779.5 2885.2 3963.5 3109.2 3471.2 True False 2566.5142353994697 2687.4556468885507 2467.46229471347 2491.220189827407 2587.8731993804354 3444.627232430347 3284.499171569243 3294.185935554426 3065.7735784089136 2406.829560566818 2609.20523975369 0.9836383111210331 1.0299901310723443 0.9456758161908334 0.9547812306488312 0.9918243149108238 1.320182552122853 1.2588121170105044 1.2625246513246304 1.1749836815053782 0.9224378074581913 1.0 11.349394715490126 -7.041410027005432 24.968593391814217 1.1301521696467585 0.9790328832654352 0.368747212181306 0.11143722156581173 501.3931152846147 302319.27672041766 0.017631748532721783 0.030541192070386382 9.090546088348837e-08 7.041410027005432 -0.15111928638132321 EAIS(ph)DEDEDEALYQK ddPTM_A549_PD325901_60min_R1 2 EAISDEDEDEALYQK 15 0 Q9C0B7 Q9C0B7 TANGO6 Transport and Golgi organization protein 6 homolog 1 EAIS(1)DEDEDEALYQK;EAIS(1)DEDEDEALYQK 171.91 5.7692e-51 5396200.0 2870.6 3012.5 2297.9 3470.2 4225.2 3135.6 3344.1 3174.2 3526.0 3414.6 3697.0 True False 3162.021198775971 3266.3739473696696 2453.849312395232 3684.5463726039798 3928.436528148691 3110.0647132048675 3471.3615554617368 3110.88809088827 3377.8144819952954 3199.0015732607167 3242.292437213906 0.9752424434278013 1.0074273097267121 0.7568254128562872 1.1364016182852714 1.2116231352420472 0.9592178291842604 1.0706503570185881 0.9594717784190524 1.041798217590096 0.986648069293099 1.0 11.662798504663519 -6.284090326320368 24.99820977825994 1.0350968735378179 0.9225912130124161 0.28072357330568176 0.0930477079076345 833.7857332335194 920187.4430787287 0.012630670549525299 0.029370947320209846 5.198878569120527e-07 6.284090326320368 -0.11250566052540178 EAKDCDPGS(ph)PR ddPTM_A549_MK2206_60min_R1 4 EAKDCDPGSPR 11 1 Q00341;A0A024R4E5;Q00341-2;H0Y394 Q00341 HDLBP Vigilin 1 EAKDCDPGS(1)PR;EAKDCDPGS(1)PR;EAKDCDPGS(1)PR;EAKDCDPGS(1)PR 117.93 1.3737e-05 243818000.0 9769.7 12035.4 10560.849999999999 8436.400000000001 11605.78 8205.66 8476.49 5895.7 12763.2 15689.599999999999 16941.5 True False 11418.586513767574 12647.95045265025 12058.5373323113 10503.318378724383 9898.585136083799 9073.97749472373 10016.558511536241 6731.43352982401 9872.355578642282 12145.30846309956 12734.457988386477 0.8966684349016701 0.9932068144702255 0.9469219140153746 0.8247950865520276 0.7773071413884339 0.7125530982943271 0.7865712479220635 0.5285999243912004 0.7752474104234067 0.9537357988990024 1.0 13.636449935619526 -6.25709701674427 19.91165989984469 0.8330172110860454 0.9503600160209267 0.18845954125087916 0.12174263725707409 39.83581092967022 182638.82461030534 0.02072200492956175 0.052519741352482115 5.532265105229611e-07 6.25709701674427 0.11734280493488125 EAKDCDPGS(ph)PR ddPTM_A549_PD325901_60min_R1 4 EAKDCDPGSPR 11 1 Q00341;A0A024R4E5;Q00341-2;H0Y394 Q00341 HDLBP Vigilin 1 EAKDCDPGS(1)PR;EAKDCDPGS(1)PR;EAKDCDPGS(1)PR;EAKDCDPGS(1)PR 143.56 2.1840999999999995e-11 372458000.0 24198.6 23140.5 26142.1 23226.699999999997 20622.7 26635.9 25515.3 28742.9 20007.699999999997 23527.9 26538.3 True False 26655.22405793223 25090.631146591804 27916.260111217824 24661.360507337016 19174.232696452724 26418.98606150451 26486.29870400788 28169.600311131173 19166.845947650945 22042.344378703478 23274.257340144373 1.1452663631056546 1.0780421811060101 1.1994479438476748 1.0595981709285354 0.823838647834328 1.1351161790213595 1.138008328984283 1.2103329399277165 0.8235212693378275 0.9470697198438189 1.0 14.506447513014086 -8.766137264754835 24.99999645063157 0.9166628238765825 1.09343345715496 0.35323224643265205 0.1052804708032994 101.64133057008692 540886.940568974 0.02017186118524515 0.02181694632309481 1.713415673285996e-09 8.766137264754835 0.1767706332783775 EAKDCDPGS(ph)PRR ddPTM_A549_MK2206_60min_R1 1 EAKDCDPGSPRR 12 2 Q00341;A0A024R4E5;Q00341-2;H0Y394 Q00341 HDLBP Vigilin 1 EAKDCDPGS(1)PRR 45.863 0.014537999999999999 8022700.0 1445.7 1666.7 1770.6 1301.8 1045.5 651.56 606.38 481.1 1199.1 2334.3 2374.8 True False 1689.6988160285146 1751.5279109487155 2021.6977043126644 1620.7410584400227 891.7083349654752 720.5076467294756 716.5513968901446 549.2973983069577 927.5057645692261 1806.9800087582414 1785.071618854304 0.9465720020314917 0.9812087607290976 1.1325583147247795 0.9079417550093861 0.4995364474719463 0.40362954579486976 0.4014132482538948 0.30771728848588614 0.5195902252731566 1.012273115359931 1.0 10.801766242442051 -6.584591504810335 6.103853285730258 0.660171489746102 1.0172167572385376 0.4058657874888739 0.22602905227779277 0.2121951507073456 15.374714250450017 0.03971300098085927 0.08370427717787046 2.6026064106444833e-07 6.584591504810335 0.3570452674924356 EAKDCDPGS(ph)PRR ddPTM_A549_PD325901_60min_R1 2 EAKDCDPGSPRR 12 2 Q00341;A0A024R4E5;Q00341-2;H0Y394 Q00341 HDLBP Vigilin 1 EAKDCDPGS(1)PRR;EAKDCDPGS(1)PRR 53.777 0.007221600000000001 29538000.0 6186.5 5944.6 6485.8 6561.3 5699.7 7086.5 5636.799999999999 6858.799999999999 6058.0 5886.1 6821.4 True False 6814.548925739412 6445.572304575515 6925.965390283736 6966.576599206528 5299.372734897546 7028.789893521586 5851.311508575316 6721.995853375491 5803.403327262478 5514.450641471892 5982.411044417346 1.1390974099144524 1.0774205009851974 1.157721416810183 1.164509851877795 0.8858255802805132 1.1749092199341098 0.9780858361505653 1.123626545128207 0.9700776633658575 0.9217772902144288 1.0 12.54651132440211 -7.208489939409896 0.4290614615467155 0.9845870751632696 1.145588884247578 0.28605560673955466 0.08515130860779771 1.3204222795148775 0.42712809620567127 0.02342236642645271 0.08534894667313718 6.187426607866714e-08 7.208489939409896 0.1610018090843085 EALAEAALES(ph)PRPALVR ddPTM_A549_MK2206_60min_R1 9 EALAEAALESPRPALVR 17 1 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR 193.27 2.7073999999999996e-40 637113400.0 11292.359999999999 13071.68 11198.41 10577.39 16293.08 12517.439999999999 10938.800000000001 11772.020000000002 17174.45 17881.61 18341.72 True False 13198.234296304736 13736.972678340488 12786.512927229182 13168.851024837082 13896.389515312556 13842.027192395793 12926.238365879348 13440.739885299263 13284.46449696101 13842.141881682506 13786.96471828043 0.9572980395608699 0.9963739633079893 0.9274349494980046 0.9551668038561253 1.007936830133977 1.0039938068487515 0.9375695542863162 0.9748875231020139 0.96355251271129 1.0040021255243308 1.0 13.75101725352397 -8.030764869721791 0.003655530803530361 1.9471133610440954 2.8996789889620175e-05 0.1589715464488448 0.025265024675542015 15153.238879757395 32.770089459729334 8683.960002553607 8769.498072089495 9.316121207190143e-09 8.030764869721791 -1.9470843642542057 EALAEAALES(ph)PRPALVR ddPTM_A549_PD325901_60min_R1 6 EALAEAALESPRPALVR 17 1 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR 210.39 5.1255999999999995e-55 1038690700.0 13610.5 14089.300000000001 12992.699999999999 14204.800000000001 14727.819999999998 14359.0 14057.79 14505.6 15683.6 15590.300000000001 16317.3 True False 14992.227940479459 15276.654757402659 13874.462753452088 15082.198234558531 13693.38873142073 14242.065064711274 14592.766891167863 14216.274428576935 15024.472833188143 14605.925797342754 14310.375543887063 1.047647414597981 1.067522980829693 0.9695386896662412 1.0539344818942342 0.956885351430914 0.9952265068819267 1.0197333288993544 0.9934242735264677 1.049900667324284 1.0206528649474849 1.0 13.804773912424256 -5.720986202165339 24.999904081813067 1.014727361340875 1.0575852796370302 0.27870440726684365 0.02934245177990792 172.60105984275438 106664.52913089024 0.00417692775804049 0.01617676103390175 1.9011386794484308e-06 5.720986202165339 0.04285791829615526 EALATLPS(ph)SPGLLR ddPTM_A549_MK2206_60min_R1 1 EALATLPSSPGLLR 14 0 E9PFH2;Q9BY66-2;Q9BY66;Q9BY66-3 E9PFH2 KDM5D Lysine-specific demethylase 5D 1 EALAT(0.001)LPS(0.5)S(0.5)PGLLR 60.157 0.0071413 1106400.0 690.6 711.17 543.87 736.27 820.07 616.77 546.54 674.55 893.66 637.34 1006.0 True False 807.1563964510564 747.3655153473317 620.9989441118995 916.6561830524166 699.4387893401602 682.0361920212091 645.8392434716511 770.1695282227361 691.247436881774 493.3644513481463 756.1824358124596 1.067409606762195 0.9883402204976437 0.8212289980587609 1.2122156501394274 0.9249603749241639 0.9019466199164146 0.8540786097177022 1.0184969813471645 0.9141278666953987 0.6524410353674299 1.0 9.562590529366272 -5.331199582508315 4.393613024452942 0.9580412904549366 1.0692332308585732 0.045580360617618165 0.1346414357028393 0.33807310769825555 11.545555137110487 0.012511158791929712 0.09275627888606305 4.6644497360184236e-06 5.331199582508315 0.11119194040363667 EALATLPS(ph)SPGLLR ddPTM_A549_PD325901_60min_R1 2 EALATLPSSPGLLR 14 0 E9PFH2;Q9BY66-2;Q9BY66;Q9BY66-3 E9PFH2 KDM5D Lysine-specific demethylase 5D 1 EALATLPS(0.5)S(0.5)PGLLR;EALAT(0.032)LPS(0.484)S(0.484)PGLLR 148.96 2.5683000000000003e-13 5441500.0 2860.3 3246.9 3516.8 3204.2 3618.1 3516.5 3773.4 3400.5 3169.0 3580.0 3856.8 True False 3150.6755503584313 3520.5276579965416 3755.4711962363685 3402.116156733812 3363.9771377673896 3487.862789891857 3916.9988018837093 3332.674359859357 3035.817950494352 3353.958189033376 3382.4380502695685 0.9314806372011258 1.0408254654408136 1.1102852854724332 1.005817728564955 0.9945421284210342 1.031168269176101 1.158040071590236 0.9852876269511439 0.8975235925614093 0.9915800789806268 1.0 11.723847795985163 -8.514418437588011 24.839975185070408 0.9510713726518871 1.040801619270418 0.2340092245119073 0.060964115684316936 355.01655840967055 1042351.7730606531 0.010786231677828323 0.012524096616445607 3.0590146889673343e-09 8.514418437588011 0.0897302466185308 EALATLPSS(ph)PGLLR ddPTM_A549_MK2206_60min_R1 1 EALATLPSSPGLLR 14 0 E9PFH2;Q9BY66-2;Q9BY66;Q9BY66-3 E9PFH2 KDM5D Lysine-specific demethylase 5D 1 EALAT(0.001)LPS(0.182)S(0.818)PGLLR 88.101 7.769399999999999e-05 940200.0 853.99 895.37 893.06 923.52 1211.8 830.94 1031.1 1077.6 1389.0 1102.6 1295.9 True False 998.1226339490842 940.9405085655196 1019.7093368425781 1149.7824414583877 1033.5458252617532 918.8695192666688 1218.4375232254165 1230.3531000115931 1074.3937177772123 853.521894211043 974.0922649794903 1.0246694998343917 0.9659665130236214 1.046830339900141 1.1803629725800118 1.0610348346042093 0.9433085060849095 1.250844059675467 1.2630765526482222 1.1029691502578904 0.8762228434582776 1.0 9.927914619088636 -5.98902454899955 14.178053401018888 1.080944316786775 0.9980729561327666 0.08404654077628737 0.11359749774442075 2.4940271738174475 3201.5672648080445 0.014475518304073226 0.044524368125510944 1.025593951724651e-06 5.98902454899955 -0.08287136065400835 EALGLGPPAAQLT(ph)PPPAPVGLR ddPTM_A549_MK2206_60min_R1 2 EALGLGPPAAQLTPPPAPVGLR 22 0 A0A087WZ13;Q8IY67-2;E9PAU2;Q8IY67 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR 240.82 5.755399999999998e-98 27167000.0 6090.0 6250.0 6414.700000000001 5227.1 7145.8 5568.4 5857.299999999999 5717.599999999999 8718.1 8639.3 8917.0 True False 7117.84311379515 6568.098304091603 7324.400917121002 6507.739734653436 6094.662285984019 6157.644391995231 6921.495591880738 6528.087309415634 6743.464269944939 6687.676129745563 6702.66280331979 1.0619425924678358 0.9799237253645613 1.0927598675399974 0.9709185626092052 0.9092897054235471 0.9186862852395595 1.0326486345773744 0.9739543075600208 1.0060873518215685 0.9977640716810632 1.0 12.710518641419657 -6.294282219273599 24.978246107098368 0.9885829235492097 1.0383802733168044 0.2976905738717709 0.043788033210256795 759.9413432469839 577963.134332268 0.006375348923255191 0.014816329467554639 5.078293306026555e-07 6.294282219273599 0.049797349767594645 EALGLGPPAAQLT(ph)PPPAPVGLR ddPTM_A549_PD325901_60min_R1 3 EALGLGPPAAQLTPPPAPVGLR 22 0 A0A087WZ13;Q8IY67-2;E9PAU2;Q8IY67 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR 161.35 8.3173e-33 20621100.0 6058.17 6202.62 6303.279999999999 5924.4400000000005 7617.150000000001 6201.0 6661.7 6557.95 7599.73 8102.13 8874.37 True False 6673.190958610961 6725.336555496783 6731.058485501818 6290.379203420531 7082.147661740938 6150.5011119349965 6915.2146389221125 6427.146542637753 7280.339776872976 7590.560129081841 7782.878749266423 0.8574193654552237 0.8641194051919003 0.8648545997374372 0.8082329695825509 0.9099650514802723 0.7902604306298249 0.8885163011917547 0.8258058168057089 0.9354301938160331 0.9752895263590341 1.0 12.926088165979747 -9.128461593144564 1.145793573830929 0.9830753623853615 0.8502336571113159 0.6850780342986786 0.035697389327705796 0.14694926885488377 0.3993460000567939 0.007773466961529248 0.0069889560528443515 7.439408504469475e-10 9.128461593144564 -0.1328417052740456 EALPWGLEPQDVQSSDEMRS(ph)PEGYLR ddPTM_A549_MK2206_60min_R1 1 EALPWGLEPQDVQSSDEMRSPEGYLR 26 1 Q9H5H4 Q9H5H4 ZNF768 Zinc finger protein 768 1 EALPWGLEPQDVQS(0.104)S(0.104)DEMRS(0.687)PEGY(0.104)LR 40.669000000000004 0.020155000000000003 2546200.0 384.93 363.48 496.35 566.38 496.91 451.27 433.93 498.56 760.43 736.08 632.56 True False 449.8967733650521 381.9795794513942 566.7398935590145 705.1431254257642 423.8151972526965 499.02309187121773 512.7694641191009 569.2324067759647 588.1938191571821 569.7990167702376 475.47789423213675 0.9461991373786234 0.8033592814409686 1.1919374179829316 1.4830197869966606 0.8913457437114467 1.0495190163931907 1.078429660641085 1.1971795401660783 1.237058181447265 1.1983712043867418 1.0 8.89323445909818 -5.76237911753006 24.99968157807813 1.1273472465984664 0.874779171724365 0.3267170482214231 0.1486907004053067 22.280994993035804 592827.2993906697 0.021355441461657406 0.07251052856789483 1.7283069742836643e-06 5.76237911753006 -0.2525680748741014 EALPWGLEPQDVQSSDEMRS(ph)PEGYLR ddPTM_A549_PD325901_60min_R1 1 EALPWGLEPQDVQSSDEMRSPEGYLR 26 1 Q9H5H4 Q9H5H4 ZNF768 Zinc finger protein 768 1 EALPWGLEPQDVQS(0.292)S(0.292)DEMRS(0.37)PEGY(0.047)LR 41.434 0.01786 2230500.0 792.15 701.39 781.11 1089.8 1079.0 757.2 645.65 1218.1 707.38 1018.2 1051.0 True False 872.5684848499915 760.4985968284188 834.1208217960051 1157.1144708846227 1003.2147623479212 751.0336142488603 670.2205640632369 1193.8040399190365 677.651278580213 953.9106782329009 921.7336628379259 0.9466601037044045 0.8250741266049887 0.9049477689985091 1.2553674857897485 1.0883998304446463 0.8148054525170567 0.7271303968650713 1.295172443028101 0.7351920689256292 1.0349092332115821 1.0 9.848206130438452 -7.264446545660963 24.97664430454913 0.890980937569056 1.0025965171283613 0.004866925719861137 0.18298656198635158 584.2462221560836 4852581.372941728 0.028201138132611922 0.04624001194143766 5.439430778355305e-08 7.264446545660963 0.11161557955930523 EALREHSNPS(ph)PSQDTDGTK ddPTM_A549_MK2206_60min_R1 4 EALREHSNPSPSQDTDGTK 19 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EALREHS(0.009)NPS(0.945)PS(0.046)QDTDGTK;EALREHS(0.001)NPS(0.989)PS(0.01)QDTDGTK;EALREHS(0.001)NPS(0.954)PS(0.036)QDT(0.009)DGTK;EALREHS(0.003)NPS(0.986)PS(0.011)QDTDGTK 166.34 7.823099999999999e-28 78791000.0 5043.299999999999 5763.1 5795.200000000001 5504.5 7319.200000000001 5048.8 4519.1 4288.37 8544.5 9847.4 9376.7 True False 5894.485743153215 6056.4171738096475 6617.04650176932 6853.102747106393 6242.555375685611 5583.0606648778 5340.1619738221125 4896.259580082328 6609.184392762704 7622.865500683679 7048.206606245221 0.8363100108232175 0.8592848524677502 0.938826977050607 0.9723186520999608 0.8856941523471027 0.792125000979796 0.7576625192982201 0.6946816195404782 0.9377115005264585 1.0815326403640422 1.0 12.783040499703139 -8.976644403388816 18.128014691776922 0.9725227078878255 0.8452814078977751 0.4379418174661055 0.08125165487499383 6.618229821941046 5137.474454230215 0.014768266755546712 0.015264877357016525 1.055250572910601e-09 8.976644403388816 -0.1272412999900504 EALREHSNPS(ph)PSQDTDGTK ddPTM_A549_PD325901_60min_R1 4 EALREHSNPSPSQDTDGTK 19 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EALREHS(0.001)NPS(0.986)PS(0.013)QDTDGTK;EALREHSNPS(0.992)PS(0.008)QDTDGTK;EALREHS(0.001)NPS(0.996)PS(0.003)QDTDGTK;EALREHSNPS(0.931)PS(0.069)QDTDGTK 232.44 6.320399999999998e-76 129250000.0 13608.1 12760.3 13544.7 14832.5 16640.7 19004.7 16497.699999999997 18133.8 18376.600000000002 16811.5 17866.899999999998 True False 14989.584294246251 13835.655263276736 14463.924792897737 15748.669837948404 15471.914639298484 18849.9320241882 17125.529001387844 17772.10713330911 17604.295408347924 15750.019020931466 15669.384567610803 0.9566160195742643 0.8829737507288925 0.9230691052662785 1.0050598841323664 0.9873977227720547 1.2029784541220405 1.0929292677382458 1.1341930537619653 1.1234835249839137 1.0051459872576831 1.0 13.935660897031166 -6.647347963364998 1.8358362006842914 1.0770768203317909 0.918427967579511 0.573350605883046 0.06097080556950075 0.22069274018182064 1.4967903567252117 0.010206855369613549 0.026065946377340304 2.2524338046589756e-07 6.647347963364998 -0.1586488527522799 EALRVS(ph)EPK ddPTM_A549_MK2206_60min_R1 2 EALRVSEPK 9 1 O60264;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 O60264;A0A0A0MRP6 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 1 EALRVS(1)EPK;EALRVS(1)EPK 58.172 0.0033315 10605900.0 2237.9700000000003 2626.7 2580.9 2368.3 4309.4 3350.6000000000004 2868.8999999999996 2972.7 4561.3 3880.6 4459.700000000001 True False 2615.684622886721 2760.387810457184 2946.910428702449 2948.5336063170257 3675.492968627662 3705.158268051724 3390.1419943568967 3394.0893285119387 3528.172832899351 3003.969764806251 3352.2334085415782 0.7802811749987004 0.8234473779253091 0.8790886759834933 0.8795728837986296 1.09643110150457 1.105280514957844 1.011308456540862 1.0124859802016501 1.052484240479638 0.8961099657177981 1.0 11.710906888837188 -6.62768040966562 4.857898563179951 1.0334635249421475 0.8348073278146474 0.709162819455541 0.05708567561835284 0.0648287583408229 2.524911270355822 0.006315272968555176 0.013415289567086562 2.3567829646571625e-07 6.62768040966562 -0.19865619712750016 EALRVS(ph)EPK ddPTM_A549_PD325901_60min_R1 2 EALRVSEPK 9 1 O60264;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 O60264;A0A0A0MRP6 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 1 EALRVS(1)EPK;EALRVS(1)EPK 71.153 0.00090129 24468000.0 4613.5 5256.9 5284.8 5034.8 5934.8 5286.700000000001 4512.0 5028.3 5229.8 5118.7 5643.0 True False 5081.859123720805 5699.917412092157 5643.458308084048 5345.788161139567 5517.960121948511 5243.646867999802 4683.706629061137 4928.006611874958 5010.009693119396 4795.504408437192 4948.946773924282 1.0268566941347663 1.151743526950966 1.1403352199743 1.0801870388475827 1.1149766554415836 1.0595480427529103 0.9464047287271952 0.9957687639399041 1.0123385685853101 0.9689949452890524 1.0 12.272905810720626 -7.534450513747921 5.616039966045675 1.000905244941147 1.1049204257544867 0.7002977461491018 0.036227959191384045 0.07223941958919097 7.634243384868081 0.0050941579643972645 0.007767688235319198 2.9211205921461668e-08 7.534450513747921 0.1040151808133396 EALS(ph)PCPSTVSTK ddPTM_A549_MK2206_60min_R1 2 EALSPCPSTVSTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EALS(0.999)PCPS(0.001)TVSTK;EALS(1)PCPSTVSTK 155.98 2.3444e-18 19897700.0 6566.0 7281.1 6371.4 5611.5 8790.900000000001 7017.9 6294.4 5855.799999999999 9198.3 8196.900000000001 8911.7 True False 7674.180276712479 7651.676889907417 7274.960326023781 6986.317751909809 7497.770255234816 7760.529519895004 7438.011003966703 6685.8775826353785 7114.899736666763 6345.214597005712 6698.67893959235 1.1456259280250702 1.1422665511974905 1.0860291098630412 1.042939632562083 1.1192908815079134 1.1585164164275163 1.1103698312818895 0.9980889729045963 1.062134758334864 0.9472337238768831 1.0 12.709660891393918 -14.992432020627042 0.04021777422362068 0.4882097811038191 1.3877362411094585 0.5982736018841843 0.042244634036707585 335.4477195721282 1.038306377667869 20.640051456129278 6.404890008845579 1.0175786335596237e-15 14.992432020627042 0.8995264600056394 EALS(ph)PCPSTVSTK ddPTM_A549_PD325901_60min_R1 2 EALSPCPSTVSTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EALS(1)PCPSTVSTK;EALS(0.999)PCPS(0.001)T(0.001)VSTK 201.48 1.3338999999999997e-30 44702000.0 14624.400000000001 14827.8 14504.1 13789.3 15362.6 14070.9 13801.5 15861.0 13238.5 15569.7 17408.6 True False 16109.058322085733 16077.390744168617 15488.435446238605 14641.0337432275 14283.58397409285 13956.311255592032 14326.723634970584 15544.639912286211 12682.131883123859 14586.626484858372 15267.452562207722 1.0551241771637319 1.053049988441803 1.0144741163026694 0.9589703117512329 0.9355577766424314 0.9141218024897473 0.9383833731656209 1.0181554420391405 0.830664567743054 0.9554067009820203 1.0 13.898171742112373 -6.201454101229396 1.5217281490204293 0.9273256447903658 1.0591623516196462 0.4590336942231247 0.04672630975706532 0.3420556582092948 1.4574346818110933 0.009426111145296972 0.03907021247267383 6.288483109587413e-07 6.201454101229396 0.1318367068292804 EALS(ph)PPR ddPTM_A549_MK2206_60min_R1 4 EALSPPR 7 0 O95243-2;O95243-6;O95243-3;O95243-5;O95243 O95243-2 MBD4 Methyl-CpG-binding domain protein 4 1 EALS(1)PPR;EALS(1)PPR;EALS(1)PPR;EALS(1)PPR 72.23 0.019918 15554000.0 3501.3700000000003 4120.01 3605.03 3086.85 4635.48 3814.84 3961.92 3857.79 4842.17 5642.110000000001 4859.65 True False 4092.3156557223238 4329.700911014468 4116.277462429847 3843.128388573963 3953.6070325832247 4218.523836714152 4681.749580076851 4404.64354648638 3745.4262263565756 4367.553432384426 3652.864785483123 1.1203030760912984 1.1852891265565495 1.1268628060880808 1.0520861335593281 1.0823305172135809 1.1548535422058377 1.2816651737788454 1.205805252904763 1.025339410656891 1.1956515471751248 1.0 11.834812636521523 -8.839618777506336 6.98838803387803 1.0113453461096378 1.1502096659592196 0.02088562339573452 0.08062752065239627 0.13466701867255554 10.002967422287847 0.011213870528873722 0.011917494313998498 1.4467091308131697e-09 8.839618777506336 0.1388643198495818 EALS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 EALSPPR 7 0 O95243-2;O95243-6;O95243-3;O95243-5;O95243 O95243-2 MBD4 Methyl-CpG-binding domain protein 4 1 EALS(1)PPR;EALS(1)PPR 71.37899999999999 0.020558 8834000.0 1024.72 1283.72 1273.76 1029.34 1476.93 1234.87 1370.1 1149.04 1199.25 1444.15 1518.27 True False 1128.7488200410073 1391.9035896157322 1360.205013341116 1092.9199939992463 1373.195531931896 1224.8136281398436 1422.239905247488 1126.121495795558 1148.849693004214 1352.9661225398188 1331.5324151065058 0.8477066027346556 1.0453396205937633 1.0215335337760567 0.8207986389214764 1.0312896001274274 0.9198526556650699 1.0681226300703515 0.8457334444279996 0.8628026475137074 1.0160970226410888 1.0 10.378871834911081 -8.283393271440815 24.956936622250698 0.9266912082763409 0.9654901714611897 0.03206116284170746 0.08804681836598673 2281.82464718138 2593945.496025157 0.014400137261503366 0.017415686713398767 5.207229615740374e-09 8.283393271440815 0.03879896318484877 EALS(ph)PPRR ddPTM_A549_MK2206_60min_R1 1 EALSPPRR 8 1 O95243-2;O95243-6;O95243-3;O95243-5;O95243 O95243-2 MBD4 Methyl-CpG-binding domain protein 4 1 EALS(1)PPRR 51.276 0.012359 2732000.0 651.66 542.92 553.79 357.39 920.16 807.3 744.48 887.33 826.1 761.28 696.29 True False 761.6442764426519 570.5523090011856 632.3257492778216 444.95056604384666 784.8056829285814 892.7279501576306 879.7423792947907 1013.1117448341566 638.9896690106232 589.3063192680778 523.3819763736162 1.4552359668934265 1.0901260164792086 1.2081534669173168 0.8501449918600534 1.4994893182342754 1.7056910448906188 1.6808801582933888 1.9357023943655003 1.2208858880430387 1.125958374323921 1.0 9.03172043314401 -9.149766502615867 3.2657365447143194 1.0837928923407136 1.416183229288653 0.18587628415029134 0.29031612775385784 0.28617210419506 6.349775087449489 0.06095981822301595 0.05875392884815066 7.083265120726728e-10 9.149766502615867 0.3323903369479393 EALS(ph)PPRR ddPTM_A549_PD325901_60min_R1 1 EALSPPRR 8 1 O95243-2;O95243-6;O95243-3;O95243-5;O95243 O95243-2 MBD4 Methyl-CpG-binding domain protein 4 1 EALS(1)PPRR 51.268 0.012366 3927800.0 692.93 841.62 733.78 951.86 861.87 684.29 696.5 727.12 568.64 770.25 709.78 True False 763.275743491895 912.5462710656464 783.5787233775941 1010.6542303690929 801.3352244900865 678.7173691156262 723.0056886394244 712.6170211853951 544.7420382988666 721.6162835483125 622.4815596661306 1.2261820959022138 1.4659812116443942 1.2587982908246604 1.623589027940297 1.2873236356108035 1.090341325901538 1.1614893283380316 1.1448002115397746 0.8751135352363535 1.159257286168209 1.0 9.281887289329298 -7.748605912116433 0.9566833359348123 0.9465371988992813 1.3901640204455845 0.5014333641956303 0.13877807772241824 0.21018534475950704 0.38778367881469294 0.022937201900663097 0.039946166669420975 1.7839968692071273e-08 7.748605912116433 0.4436268215463032 EANANGS(ph)SPEPVK ddPTM_A549_MK2206_60min_R1 1 EANANGSSPEPVK 13 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.524)S(0.476)PEPVK 229.44 2.323e-46 81086000.0 9273.5 9262.4 8722.1 8346.6 13474.0 10428.0 9840.0 8902.0 13911.0 13784.0 13395.0 True False 10838.640084692839 9733.816597090881 9959.024933234768 10391.51737469311 11491.99244889987 11531.484038453826 11627.800628976915 10163.885761231626 10760.180711302231 10670.184826596236 10068.651816807054 1.0764738201196395 0.9667447811476358 0.9891120593335752 1.0320664140304379 1.141363576573073 1.1452858086923758 1.1548517955072453 1.0094584603934365 1.0686813793025245 1.0597431533768082 1.0 13.297582900290486 -4.929733838885177 20.30352654250041 1.0464889425243278 1.8773508685759976 0.0 0.06364991532081017 1916.393426053396 587784.5099004142 0.009330872939350917 4410.565739784208 1.1756178217165054e-05 4.929733838885177 0.8308619260516699 EANANGS(ph)SPEPVK ddPTM_A549_PD325901_60min_R1 1 EANANGSSPEPVK 13 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.731)S(0.269)PEPVK 133.48 2.9979e-08 75126000.0 7867.0 7997.3 8373.7 7342.7 9757.5 8023.7 9065.9 8132.2 8766.5 8087.3 8918.2 True False 8665.652048620694 8671.260537526794 8941.989637148685 7796.24190251837 9072.166861547586 7958.357647449259 9410.907785550835 7969.996891412519 8398.074491324945 7576.666497812746 7821.3179371276865 1.1079529202469784 1.108669997464806 1.1432842532460143 0.9967938862975662 1.1599281520678424 1.017521306693217 1.2032381065699156 1.019009450258895 1.0737416070838144 0.9687199214657182 1.0 12.933196015104237 -10.725018907955668 0.2878375588672178 0.954363100044239 1.1078203443858392 0.33118826366858034 0.060376532613642585 3.871492198705914 0.4120994306359921 0.19984239518635027 0.030306495187083424 1.8835670825114365e-11 10.725018907955668 0.15345724434160024 EANANGS(ph)SPEPVKAVEAR ddPTM_A549_MK2206_60min_R1 1 EANANGSSPEPVKAVEAR 18 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.555)S(0.445)PEPVKAVEAR 66.383 0.00056944 18783000.0 1859.9 2608.6 2422.7 1996.7 3074.2 1937.0 2002.5 1810.5 3577.3 3084.1 4034.4 True False 2173.805649810773 2741.366597768537 2766.275289866877 2485.8915896352696 2621.989252368115 2141.9720543234603 2366.3283292201504 2067.1439194237105 2767.0472617742435 2387.3996679995253 3032.5471362244434 0.7168250161206683 0.9039815292637364 0.9121953148965466 0.8197371641616867 0.8646161575026736 0.7063277034467601 0.780310485846646 0.6816526921317136 0.9124498771086703 0.7872588819746643 1.0 11.566314354630707 -8.97937220450374 5.01042525273781 0.9629641395809324 0.8039966465553264 0.11923312910463812 0.0910147540949012 0.12251479995625016 7.151743550028519 0.014154927720928667 0.014558173808610337 1.0486433219737823e-09 8.97937220450374 -0.15896749302560598 EANANGS(ph)SPEPVKAVEAR ddPTM_A549_PD325901_60min_R1 1 EANANGSSPEPVKAVEAR 18 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.5)S(0.5)PEPVKAVEAR 117.01 1.3118e-10 28979000.0 5785.9 5170.5 6848.9 7005.2 7621.0 9945.9 8021.0 8654.4 8065.2 9064.2 8323.7 True False 6373.280308645538 5606.236180871327 7313.707539781415 7437.895294036486 7085.727251022719 9864.90388795263 8326.243544259616 8481.781202754537 7726.247691488503 8491.884865093954 7299.937668281686 0.8730595517736426 0.7679841165261573 1.0018862998734304 1.0188984662642022 0.9706558566671448 1.3513682357612111 1.1405910464738955 1.1618977569641418 1.0583991319623371 1.163281832116361 1.0 12.833668430018465 -5.902879360861826 3.7905865993306036 1.0632638856144756 0.820951124850139 0.4749525873236582 0.10862706292546294 0.16206904636380332 4.410677171543711 0.015518963253082448 0.05395908313333014 1.2506063777643035e-06 5.902879360861826 -0.2423127607643366 EANANGSS(ph)PEPVK ddPTM_A549_MK2206_60min_R1 1 EANANGSSPEPVK 13 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.387)S(0.613)PEPVK 168.78 1.3418e-21 75623000.0 4033.6 4457.7 4042.9 4459.2 5707.3 4454.9 4736.3 4879.0 6045.3 6601.2 5891.0 True False 4714.373067948134 4684.577889623862 4616.244012631691 5551.704200181091 4867.763730414594 4926.314561076711 5596.824402339772 5570.61319131084 4676.049202360389 5109.984335267488 4428.102116671176 1.064648678764473 1.057920022211568 1.0424881565518074 1.2537434896272408 1.099288950922824 1.1125115074762697 1.2639330021926374 1.25801371434915 1.0559939854945366 1.1539897230529355 1.0 12.11247277722337 -8.966656772753447 13.260366826078974 1.0246814110482438 1.1438075122908982 0.07500211314813288 0.08726072968008101 1.1176986427096631 443.55594534776696 0.014456262007666297 0.015200099186198607 1.079799761589014e-09 8.966656772753447 0.11912610124265433 EANANGSS(ph)PEPVK ddPTM_A549_PD325901_60min_R1 1 EANANGSSPEPVK 13 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.467)S(0.533)PEPVK 207.66 2.4258e-32 88976000.0 9770.0 8386.4 9127.7 10057.0 11577.0 9912.5 10353.0 9840.7 9779.2 9489.2 11408.0 True False 10761.843207706142 9093.151360073354 9747.160611319012 10678.198048895805 10763.87145848183 9831.775886478898 10746.989080378979 9644.419518620196 9368.214232084056 8890.050292562997 10004.888321270286 1.0756585043359832 0.9088708507361758 0.9742398214077664 1.0672980753012575 1.0758612303145807 0.9826972146782136 1.0741738173659565 0.9639707319987034 0.936363698549971 0.8885706673669556 1.0 13.288417442920164 -8.371465883644163 23.977255142843674 0.968660993853802 1.0187048431612953 0.25977457476747 0.05700693129635879 26.04649857301681 5649.3136888286635 0.00886031259306533 0.010711595548305966 4.251421028761382e-09 8.371465883644163 0.05004384930749328 EANANGSS(ph)PEPVKAVEAR ddPTM_A549_MK2206_60min_R1 1 EANANGSSPEPVKAVEAR 18 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.051)S(0.949)PEPVKAVEAR 90.30799999999999 1.6456e-06 19391000.0 2057.1 2230.9 2638.5 2466.1 3057.7 2294.1 1954.8 1862.5 4006.1 3581.3 3511.8 True False 2404.2881887336644 2344.443281055672 3012.6789748271563 3070.294610707436 2607.916380510696 2536.8601392996657 2309.9618566589525 2126.5150786670297 3098.7247464271377 2772.2818426791273 2639.723139250694 0.9108107410901206 0.8881398379229877 1.1412859667102544 1.1631123601768945 0.9879507216999178 0.9610326558791211 0.8750773224326294 0.8055826185130375 1.1738824804584373 1.050216896407576 1.0 11.366170908724722 -8.792022640582648 24.99968850914416 1.0821111390459206 0.9738523062981769 0.16097531599433568 0.1086236840763661 298.8339525885593 244274.65792777736 0.021657460385082518 0.02305738167722963 1.6142743994927925e-09 8.792022640582648 -0.10825883274774373 EANANGSS(ph)PEPVKAVEAR ddPTM_A549_PD325901_60min_R1 1 EANANGSSPEPVKAVEAR 18 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.053)S(0.947)PEPVKAVEAR 109.56 8.218099999999999e-10 30949000.0 4089.1 4775.6 6524.2 5672.2 6610.3 7523.4 6489.2 7057.4 7314.8 7238.0 6487.6 True False 4504.222421763682 5178.056571969656 6966.9714452017 6022.558911499136 6146.015332297 7462.131924775321 6736.150057026495 6916.634620576807 7007.384393902209 6780.991444755196 5689.666328284805 0.791649661311776 0.9100808858031262 1.224495610677041 1.0585082786945583 1.0802066373811001 1.311523645539481 1.1839270826022519 1.2156485497563232 1.2315984786430596 1.1918082807501613 1.0 12.474128332511338 -5.608414153277039 4.573085534493962 1.1370664083199866 0.8163785006884138 0.6457369668023094 0.08950879431642268 0.11366814727606772 4.153495202254035 0.01508731279951826 0.06527053049064899 2.4636887859523413e-06 5.608414153277039 -0.32068790763157284 EANLLNAVIVQR ddPTM_A549_PD325901_60min_R1 1 EANLLNAVIVQR 12 0 Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 0 56.358999999999995 0.045772 636650.0 865.96 845.62 922.96 817.76 1008.0 836.78 1128.9 896.02 858.77 1004.0 786.06 False True 953.8716217139416 916.8833651036487 985.5976158093491 868.2711779322899 937.2015574112185 829.9655411135249 1171.8609072577826 878.1481781859076 822.6788833531198 940.607268656288 689.3796032448907 1.3836667305271206 1.3300123194650726 1.4296878108522044 1.2594964716759265 1.359485475055886 1.2039310957372398 1.6998775445949745 1.2738238469088559 1.1933612185228473 1.364425730365209 1.0 9.429154803924117 -9.260544203509019 1.019987491567041 1.0455964982124324 1.3700700309134741 0.09646111337641494 0.15741709742075954 0.2420183394471147 0.5288009603851561 0.03167944803610674 0.026102872563549095 5.488526892524537e-10 9.260544203509019 0.32447353270104173 EANLQQNEEKNHSDSSTSESEVSSVS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 EANLQQNEEKNHSDSSTSESEVSSVSPLK 29 1 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 EANLQQNEEKNHSDSSTSESEVS(0.189)S(0.111)VS(0.699)PLK 146.01 4.7568e-36 15973000.0 2244.4 3102.8 2613.2 3129.2 3563.6 3990.7 3304.9 3308.5 3826.1 4150.6 4716.7 True False 2472.249835760048 3364.2838452775472 2790.5474664481585 3322.4835770711707 3313.305029752598 3958.201062312369 3430.6697780106742 3242.5093720319614 3665.302322621155 3888.530407654175 4136.5758016247855 0.5976561180841857 0.813301630772995 0.6746032468091296 0.8031965897412416 0.8009777140917328 0.956878648460315 0.8293501539759427 0.7838631582088625 0.8860715960242959 0.9400360573899839 1.0 12.01422130405037 -2.840919211982607 0.10421532723659241 1.096578084339748 7.471280944985025e-18 0.6451281794956762 0.0677250863194553 34.74673182059301 0.2959980545018162 0.39446723599646916 5.419164286337106 0.0014423836406279847 2.840919211982607 -1.096578084339748 EANNGS(ph)SPAGSLADAMSQK ddPTM_A549_PD325901_60min_R1 2 EANNGSSPAGSLADAMSQK 19 0 P51692;C9J4I3 P51692 STAT5B Signal transducer and activator of transcription 5B 1 EANNGS(0.636)S(0.36)PAGS(0.004)LADAMSQK;EANNGS(0.495)S(0.495)PAGS(0.009)LADAMSQK 99.569 3.5023000000000003e-07 2858400.0 1533.7 1199.3 1562.7 2042.2 1830.8 1789.6 1767.5 2109.5 1913.7 2055.3 2297.6 True False 1689.400094949734 1300.3692199437162 1668.7542192784854 2168.3420558272874 1702.2109239171232 1775.0260909399888 1834.7631797131116 2067.424367629264 1833.2738440710148 1925.5280072403082 2015.0097656864134 0.8384078944521838 0.6453413983831215 0.828161851965032 1.0760950605560173 0.8447655951370859 0.8809019793188575 0.910548033541713 1.0260120833334996 0.9098089127357205 0.9555923946524283 1.0 10.976571115411964 -6.006314803527991 23.275725836338335 0.9510002375089376 0.7405937932391002 0.5496541122477494 0.07499748153648084 58.667615349682684 216252.020487667 0.009938146564218516 0.02937886505598691 9.85564828243949e-07 6.006314803527991 -0.21040644426983734 EAPAEGEAAEPGS(ph)PTAAEGEAASAASSTSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK 32 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 EAPAEGEAAEPGS(0.601)PT(0.255)AAEGEAAS(0.068)AAS(0.084)S(0.082)T(0.081)S(0.258)S(0.571)PK 51.203 0.0026026 1192500.0 202.13 340.25 150.25 0.0 514.44 238.3 245.73 225.08 287.41 261.43 561.21 True False 236.24460239596291 357.56727167474656 171.55770929231772 0.0 438.7665574745475 263.5167478292622 290.3759602193597 256.9857792785909 222.3120938994591 202.37278142897955 421.8460683919589 0.5600256114665406 0.847624995149919 0.40668320069043434 0.0 1.0401105767018004 0.6246751305132829 0.688345778179818 0.609193254445155 0.5269981411629454 0.47973134418535 1.0 8.720572845388567 -10.825212047945636 0.769304126407044 1.0391065271406636 0.5859895353929895 0.0 0.29034652761406043 0.8916611192443392 0.8000259230037978 0.26010767561922365 0.045994982266378874 1.4955052847286817e-11 10.825212047945636 -0.45311699174767417 EAPAEGEAAEPGS(ph)PTAAEGEAASAASSTSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK 32 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 EAPAEGEAAEPGS(0.538)PT(0.404)AAEGEAAS(0.074)AAS(0.187)S(0.166)T(0.166)S(0.175)S(0.29)PK 44.875 0.009079 1404300.0 227.71 344.82 418.44 394.53 600.17 295.86 260.27 413.08 334.84 337.72 342.2 True False 250.82695156875786 373.8791915458951 446.83785468412975 418.8992220573592 558.0161296740985 293.45061425207024 270.1747172752087 404.84079534500887 320.767839237466 316.39630156434424 300.1115693845276 0.8357790140618596 1.2458006611096366 1.4889057946033541 1.3958116407056307 1.8593622725657815 0.9778050704738982 0.9002475906853116 1.3489676395190668 1.0688286356147498 1.0542622605760035 1.0 8.229355126078326 EAPAEGEAAEPGS(ph)PTAAEGEAASAASSTSSPK ddPTM_A549_MK2206_60min_R1 2 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK 32 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EAPAEGEAAEPGS(0.5)PT(0.5)AAEGEAASAASSTSSPK;EAPAEGEAAEPGS(0.577)PT(0.423)AAEGEAASAASSTSSPK 120.91 9.1558e-22 73708000.0 2869.87 3398.1 2648.76 2357.32 2853.57 2065.98 2414.67 2221.38 3273.0099999999998 3147.78 3406.54 True False 3354.2338944149897 3571.048775541387 3024.393997105622 2934.863505824117 2433.8136331013206 2284.6006323134684 2853.3842830052527 2536.2674176909377 2531.678460922961 2436.6943117718433 2560.6021022789046 1.30993952220447 1.3946129202827715 1.1811261087437006 1.1461614841337997 0.9504848999910046 0.8922122770578849 1.1143411467427038 0.9904964990201682 0.9887043592871373 0.9516099005008295 1.0 11.322267371385921 -6.212647615815961 1.5978503636338224 0.9938875556510619 1.3533345932286378 0.8262618179651106 0.06392948468495069 0.10756799925643618 0.5103476386086575 0.00854547262150776 0.03371620378810848 6.128474511354334e-07 6.212647615815961 0.3594470375775759 EAPAEGEAAEPGS(ph)PTAAEGEAASAASSTSSPK ddPTM_A549_PD325901_60min_R1 2 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK 32 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EAPAEGEAAEPGS(0.513)PT(0.484)AAEGEAAS(0.003)AASSTSSPK;EAPAEGEAAEPGS(0.875)PT(0.125)AAEGEAASAASSTSSPK 144.29 1.9797999999999997e-40 45933000.0 4024.1000000000004 3585.3 4160.6 3574.9 4631.9 3743.8 3503.0 4290.4 4728.8 6559.5 5495.2 True False 4432.623669614151 3887.4458136114426 4442.96333572027 3795.7134538130285 4306.571323187527 3713.311734052932 3636.308581915151 4204.8246062463095 4530.064980844969 6145.332050548725 4819.325236942885 0.9197602261070814 0.8066369507108478 0.9219056853981165 0.7876026761416128 0.8936046254307957 0.7705044900452606 0.7545264955435599 0.8724923925063044 0.9399790962683799 1.2751436660554138 1.0 12.234615450730951 -8.841881770544044 2.1296493606817712 0.9765842928914271 0.8353739292536472 0.4268215535666803 0.10538032754508449 0.15827985696027833 1.403743876376347 0.010256507123180904 0.010790470985839535 1.4391903205802763e-09 8.841881770544044 -0.14121036363777995 EAPAEGEAAEPGSPTAAEGEAASAASSTS(ph)SPK ddPTM_A549_MK2206_60min_R1 2 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK 32 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EAPAEGEAAEPGS(0.001)PT(0.007)AAEGEAAS(0.025)AAS(0.087)S(0.072)T(0.072)S(0.568)S(0.168)PK;EAPAEGEAAEPGSPT(0.001)AAEGEAAS(0.002)AAS(0.007)S(0.031)T(0.079)S(0.673)S(0.205)PK 75.85600000000001 5.2743e-06 9553200.0 955.4100000000001 1007.96 899.53 862.23 1479.3600000000001 982.1800000000001 802.8299999999999 1078.87 1274.8899999999999 1685.04 1639.21 True False 1116.6598504681497 1059.2608586547467 1027.096880131238 1073.4763887069753 1261.748103696342 1086.1136356816821 948.6938190001562 1231.8031264008046 986.1294505809864 1304.3882936888945 1232.1489171055098 0.9062702040037011 0.859685744108836 0.8335817739823466 0.8712229291478188 1.0240224100998805 0.8814791950904076 0.7699506170315603 0.999719359648899 0.8003330091767986 1.0586287709062676 1.0 10.26696091487204 -11.068397022060054 1.3792352883808916 1.000068740577405 0.8743137997321373 0.3405870232104474 0.07489934750556534 0.44999956968285953 1.526314064386842 0.052200404244165007 0.011511228780048113 8.542853876856053e-12 11.068397022060054 -0.12575494084526762 EAPAEGEAAEPGSPTAAEGEAASAASSTS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK 32 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EAPAEGEAAEPGSPTAAEGEAASAAS(0.001)S(0.007)T(0.053)S(0.54)S(0.398)PK 92.648 1.2520999999999998e-09 4915100.0 440.88 590.39 334.7 443.64 780.87 566.77 569.08 874.07 614.56 406.61 705.94 True False 485.63781304129805 640.1442372738854 357.41475471460217 471.04263522045716 726.0243850552562 562.1544130319945 590.7366508125252 856.6359881553502 588.7321803899684 380.9365752075032 619.1138553223651 0.7844079224950188 1.0339685209283034 0.5773005266188085 0.7608336191655587 1.1726831483640825 0.907998437119918 0.9541648046382936 1.3836485499251348 0.9509271603741168 0.6152932484593713 1.0 9.27406093589346 -6.737846752668733 24.977241719415684 1.0118843484247804 0.7914856796064198 0.19740455948760227 0.20113160556328014 225.8598735229435 239113.99330682488 0.02252196431876358 0.046861568858092915 1.8287454025881883e-07 6.737846752668733 -0.22039866881836057 EAPAEGEAAEPGSPTAAEGEAASAASSTSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK 32 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EAPAEGEAAEPGSPTAAEGEAASAAS(0.001)S(0.009)T(0.025)S(0.291)S(0.674)PK 92.73100000000001 1.2384e-09 5633800.0 701.17 562.34 360.86 629.64 482.11 540.22 525.44 585.57 384.36 820.2 739.66 True False 772.3522622259272 609.7303653324013 385.3501296274615 668.531432783808 448.2482567892092 535.8206274293702 545.4359067318005 573.8903469792216 368.20668584790485 768.4124320237921 648.6865090910569 1.1906402420919027 0.939946116941385 0.594046776411947 1.0305924717326986 0.6910090629405831 0.826008588000643 0.840831278418397 0.8846959801636077 0.5676188431355511 1.1845666916990394 1.0 9.341377624783654 -5.389302348554452 3.622268758202307 0.8007263462253651 1.192103551927796 0.19551716321230195 0.1812163383308428 0.22347611942917983 4.679647082401948 0.02308532114747477 0.18322237259300853 4.080352201326817e-06 5.389302348554452 0.39137720570243095 EAPAEGEAAEPGSPTAAEGEAASAASSTSS(ph)PKAEDGATPSPS(ph)NETPKKK ddPTM_A549_PD325901_60min_R1 1 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKK 49 3 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 EAPAEGEAAEPGSPT(0.018)AAEGEAAS(0.023)AAS(0.17)S(0.18)T(0.191)S(0.203)S(0.215)PKAEDGAT(0.017)PS(0.086)PS(0.489)NET(0.409)PKKK 99.387 3.635e-14 23103000.0 435.41 522.15 544.94 470.08 413.13 491.11 514.56 640.91 584.25 532.49 627.55 True False 479.61250266809947 566.1534129855842 581.9229053904256 499.1157739708604 384.11317402112786 487.1105629870016 534.1418623780357 628.1265472658317 559.696004284104 498.8684905246881 550.3653283672124 0.8714438899902764 1.02868655383 1.0573393260742572 0.906880844859185 0.6979240046982783 0.8850676775590662 0.9705223691374102 1.1412901847020709 1.016953604153396 0.9064315370386762 1.0 9.10424577651489 -7.993056223185793 11.223471693133424 1.0200172691514544 0.9119838980446552 0.20328462017512006 0.10044557002216155 0.3084605515999188 465.26061611185577 0.015795232620237305 0.021600241704844713 1.0161171391826153e-08 7.993056223185793 -0.10803337110679923 EAPAS(ph)VVPFVR ddPTM_A549_PD325901_60min_R1 1 EAPASVVPFVR 11 0 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EAPAS(1)VVPFVR 58.676 0.010915000000000001 1063400.0 321.44 577.31 437.19 651.91 481.18 516.81 442.58 295.92 721.72 498.91 599.19 True False 354.0723521683789 625.9619397696212 466.8603424370392 692.1770001049684 447.3835767808831 512.6012707078092 459.4226240890687 290.01764345525083 691.3886182489065 467.4087374554868 525.4934285783609 0.6737902567616603 1.1911889011877121 0.8884227985496523 1.3171943976112956 0.8513590321980019 0.9754665669075457 0.8742690186097355 0.5518958519421405 1.3156941279348606 0.8894663796652739 1.0 9.03752891282671 EAPEEDPRLPDNFRPPGEDFRS(ph)PPDDFR ddPTM_A549_PD325901_60min_R1 2 EAPEEDPRLPDNFRPPGEDFRSPPDDFR 28 3 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 EAPEEDPRLPDNFRPPGEDFRS(1)PPDDFR;EAPEEDPRLPDNFRPPGEDFRS(1)PPDDFR 71.906 1.8142e-05 21353000.0 953.9300000000001 874.33 746.19 841.88 849.4200000000001 914.6099999999999 872.97 924.53 864.54 1252.4 1199.99 True False 1050.7722713538496 948.0128575614024 796.830940604987 893.8810155517958 789.759669539918 907.1617193979787 906.1913510575137 906.0895238702461 828.2063903188355 1173.3232502640783 1052.3988373633524 0.9984544205563949 0.9008113881392387 0.757156804355032 0.8493747653611038 0.750437611199341 0.8619942242341826 0.8610721704404933 0.8609754132191317 0.7869700734312841 1.1149035979588178 1.0 10.039465844463388 -10.902015728681254 1.1018437373165486 1.001831306772284 0.840287196301173 0.5000891988276324 0.07573408539439637 0.39181522142209724 0.8289366670387998 0.04945455410268256 0.011250088339162544 1.2530957912167463e-11 10.902015728681254 -0.16154411047111095 EAPFQSGS(ph)LKRPGSSR ddPTM_A549_PD325901_60min_R1 2 EAPFQSGSLKRPGSSR 16 2 Q8NHQ8;H0YG85 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 EAPFQS(0.075)GS(0.902)LKRPGS(0.011)S(0.011)R;EAPFQS(0.018)GS(0.979)LKRPGS(0.003)S(0.001)R 81.665 4.8198e-05 33279000.0 3476.8999999999996 3931.9 4404.0 4158.3 5312.4 5594.700000000001 4407.1 4594.1 5097.1 5001.9 4917.4 True False 3829.8723284415 4263.255012004252 4702.881923403372 4415.148746815499 4939.2753507850775 5549.1386181168755 4574.814602157653 4502.4670714982685 4882.886612642717 4686.079180370406 4312.590973966904 0.8880676028773999 0.9885600182673316 1.090500340002674 1.023781010874365 1.1453150508826768 1.2867296369199934 1.0608041963111434 1.044028311211881 1.1322396772887624 1.08660413395522 1.0 12.074339175366415 -5.419996275113102 1.8916982500095654 1.0822413765783387 0.8588312955260177 0.4182502074733516 0.0744092870881772 0.5215163796364463 2.4453195022905954 0.011888845021783258 0.18175067667797654 3.8019265716920915e-06 5.419996275113102 -0.22341008105232107 EAPGS(ph)PPLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 2 EAPGS(1)PPLS(1)PR;EAPGS(1)PPLS(1)PR 119.62 1.5579e-05 46265000.0 5701.6 5856.7 5744.299999999999 5305.6 8126.400000000001 6255.1 4987.299999999999 5362.299999999999 8975.8 8309.6 8352.9 True False 6663.890689263459 6154.781014011725 6558.928116391755 6605.472238177437 6931.017324976989 6917.010530200666 5893.427853343149 6122.422446355018 6942.795631407274 6432.455588732157 6278.644401687774 1.0613581950065727 0.9802722722053262 1.0446408009073802 1.0520538854536512 1.103903467301612 1.1016726044146237 0.9386465415622082 0.9751185215568569 1.1057793987410671 1.0244975152603062 1.0 12.616237390582684 -11.30349020798646 1.8769225693739557 0.9998022529990686 1.0499315346743958 0.008334848495075153 0.05411257640025781 0.7432263301209454 4.7267097112533465 0.04451591273511729 0.008740394447198178 4.9717558338911e-12 11.30349020798646 0.050129281675327264 EAPGS(ph)PPLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 2 EAPGS(1)PPLS(1)PR;EAPGS(1)PPLS(1)PR 150.29 1.108e-11 91081000.0 5472.6 6108.9 5563.6 5954.5 6039.200000000001 6613.0 5149.0 6512.6 6267.7 6632.9 6744.7 True False 6028.174323284812 6623.71844218641 5941.17935264464 6322.295941349317 5615.027426108963 6559.145920533164 5344.948012640915 6382.701083964138 6004.290365513869 6214.097562022203 5915.144658175986 1.019108520863069 1.1197897642335806 1.0044013622613048 1.0688320077870896 0.9492629091239219 1.1088732904388114 0.9036039389591365 1.0790439545957495 1.015070756928094 1.0505402523728649 1.0 12.530197735573928 -6.277732247473683 1.5661823308078464 1.0097875738968325 1.0634720746834536 0.04527722606179607 0.06108919988170379 0.6355065473977504 2.913807010611792 0.0076205271763090995 0.028539216929804767 5.275550109666532e-07 6.277732247473683 0.053684500786621125 EAPGS(ph)PPLSPR ddPTM_A549_MK2206_60min_R1 1 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGS(0.653)PPLS(0.347)PR 75.08800000000001 0.0013507 55997000.0 1685.3 2042.5 2005.4 1917.0 2357.6 1915.5 1508.8 1941.9 2389.1 2442.5 2737.6 True False 1969.7374383709314 2146.454525777136 2289.7958749738027 2386.6650860574014 2010.8001630938343 2118.196938594006 1782.9294297764611 2217.170271819333 1847.9726646087386 1890.7375536100783 2057.7783660836894 0.9572155441208592 1.0430931538376569 1.1127514569665162 1.1598261141211434 0.9771704262401869 1.029361068959678 0.8664341404121603 1.0774582473811278 0.8980426148253042 0.918824682372612 1.0 11.006871889162797 -7.141974708881522 2.3135463579804045 0.9576552332807597 1.0673295526480793 0.2818903896123971 0.07405482407026984 0.28677790168341405 2.999978757044145 0.011244865786734552 0.021199289638708825 7.211494740653933e-08 7.141974708881522 0.10967431936731953 EAPGS(ph)PPLSPR ddPTM_A549_PD325901_60min_R1 2 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGS(1)PPLSPR;EAPGS(0.947)PPLS(0.053)PR 124.04 5.619700000000001e-06 177232000.0 15456.900000000001 16089.8 14768.5 16429.4 19430.2 17159.5 16998.4 17589.4 17438.6 17694.5 19948.8 True False 17026.073109231635 17445.743913158018 15770.779220204968 17444.20672412536 18065.48978255105 17019.758721214093 17645.283413881385 17238.565618382643 16705.71628636504 16577.266250237742 17495.224065862258 0.9731840555534205 0.9971717908545802 0.9014333946701414 0.9970839275024522 1.0325955080393356 0.9728231348819406 1.0085771606842082 0.9853297993490451 0.9548729540973555 0.9475309483223087 1.0 14.09467352121428 EAPGSPPLS(ph)PR ddPTM_A549_MK2206_60min_R1 1 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGS(0.22)PPLS(0.78)PR 110.08 9.019e-05 65121000.0 1942.3 2418.4 2161.3 2176.6 2647.7 2026.0 2195.4 2151.0 3019.1 2965.0 3351.4 True False 2270.1127553241913 2541.486230178422 2467.8048392245346 2709.8670977112856 2258.22683738698 2240.3899752500415 2594.275762282108 2455.9108371612274 2335.2786705120125 2295.2044407180665 2519.1548860654852 0.9011406038910701 1.0088646173510254 0.9796161613067186 1.0757048376424612 0.896422387475336 0.8893418930461915 1.0298198719864937 0.9748947358282385 0.927008769262037 0.9111009622369058 1.0 11.298724111176126 EAPGSPPLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGSPPLS(1)PR;EAPGSPPLS(1)PR 94.76700000000001 0.00028668 21371000.0 7281.200000000001 7944.6 7263.1 8470.3 7775.3 7603.6 6605.7 7736.799999999999 7525.4 8751.4 8865.0 True False 8020.382063863867 8614.11932357612 7756.017642568353 8993.491193552964 7229.189751328824 7541.678802565549 6857.083528277742 7582.4834545978165 7209.13360828344 8198.835110476732 7774.661199865099 1.0316053468674664 1.1079735955215113 0.9976020103233477 1.1567695314760484 0.9298398432402766 0.9700331125292517 0.8819784363589659 0.9752815279885615 0.9272601625918475 1.0545585074008104 1.0 12.924564092262326 -6.7813827016735875 24.999993686958117 0.9574879694123587 1.0705305304489217 0.471537650717745 0.05621120699498413 131.52510604445155 164873.2785024517 0.006905246548474724 0.013061075165114575 1.6543115364107836e-07 6.7813827016735875 0.11304256103656296 EAPGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 EAPGTPR 7 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 EAPGT(1)PR;EAPGT(1)PR 78.149 0.017914 313050000.0 5453.200000000001 6503.5 5750.4 4367.5 7943.799999999999 5770.9 5355.1 6133.4 8130.599999999999 8921.400000000001 8950.0 True False 6373.566842060385 6834.500371305559 6565.893188116767 5437.537696064524 6775.277543088225 6381.572807586608 6328.052352462834 7002.828232749724 6289.032081900221 6906.049543818608 6727.467992566122 0.9473945991423818 1.0159097566659119 0.9759828207837041 0.8082591700284601 1.0071066188014468 0.9485846405569333 0.9406291281438063 1.0409307395424068 0.9348289860092424 1.0265451357702213 1.0 12.715847906599727 EAPGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 EAPGTPR 7 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 EAPGT(1)PR;EAPGT(1)PR 76.17 0.018864 430260000.0 8123.8 8333.5 8811.8 8129.8 9167.5 8531.9 7550.3 8870.3 9226.3 8464.7 9804.7 True False 8948.522195574524 9035.793291420792 9409.821737658 8631.959281884574 8523.606426158085 8462.419035142431 7837.6307981826885 8693.374907884268 8838.550696322513 7930.23739740526 8598.784057114197 1.040672976101891 1.0508222129319593 1.0943200428289384 1.0038581297716076 0.9912571788689223 0.9841413598636723 0.9114812915551974 1.0110004914813289 1.027883784220624 0.9222510234856037 1.0 13.069916949267807 -6.296703163036156 17.14496834917701 1.0018747644893113 1.0608262742404484 0.3837262944193103 0.03969588246480175 11.339800548001511 5513.322233939768 0.004906176242971309 0.011406159036992325 5.050063476149418e-07 6.296703163036156 0.058951509751137054 EAPIDKK ddPTM_A549_MK2206_60min_R1 1 EAPIDKK 7 1 J3QRS3;P19105;O14950;P24844;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 0 55.383 0.040579000000000004 3698800.0 2037.9 2665.1 2374.3 1954.9 2302.3 2161.3 2148.5 1973.7 2674.5 3866.5 3853.3 False True 2381.8476981285953 2800.742206437524 2711.0114420815326 2433.8505877587954 1963.6347198383694 2390.007331445172 2538.854639365539 2253.4780192027483 2068.7300202988868 2993.0549645991264 2896.4192643301703 0.8223421682977324 0.9669671241760738 0.9359872292896396 0.8402963679091711 0.6779525133052455 0.8251593133903176 0.876549424536671 0.7780220380918819 0.7142370739538993 1.0333638508274816 1.0 11.500054736112743 -4.928101790204892 14.41971186339371 0.8527627330779842 0.4914687166519341 0.001379333580745934 0.10916286627127877 1688614.2305630543 7697672.483597944 0.01651101068216492 18130157.322440714 1.1800440238005363e-05 4.928101790204892 -0.36129401642605014 EAPIDKK ddPTM_A549_PD325901_60min_R1 1 EAPIDKK 7 1 J3QRS3;P19105;O14950;P24844;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 0 61.998999999999995 0.027892 6346600.0 3989.6 3934.5 4043.2 3903.0 4941.9 3923.4 3521.5 3817.1 4448.5 4788.1 5061.6 False True 4394.62125501171 4266.074123128951 4317.595865736718 4144.079445643866 4594.797992629465 3891.449131199125 3655.512609538741 3740.9649460429778 4261.545015075458 4485.77854885774 4439.05528812602 0.9899902050706225 0.9610319868149031 0.9726384524396008 0.9335498606491383 1.0350846507634268 0.8766390320950315 0.8234888669480714 0.8427389845874738 0.960011700344129 1.0105254964624342 1.0 12.11603696210376 -9.284881573777028 2.431461356517265 0.986403730270961 0.9297811059277965 0.16706968678637013 0.060738412423107076 0.40649763954975343 4.922023752759753 0.013259439879005373 0.012069112263128052 5.189415279629547e-10 9.284881573777028 -0.05662262434316445 EAPPMEKPEVVK ddPTM_A549_MK2206_60min_R1 1 EAPPMEKPEVVK 12 1 S4R456;K7EM56;A0A0B4J2B4;K7EJ78;S4R417;K7EQJ5;K7ELC2;P62841 S4R456 RPS15 40S ribosomal protein S15 0 60.161 0.008965899999999999 2464400.0 1296.2 1646.2 1618.1 1779.0 2167.0 1544.5 1382.6 1565.5 2358.8 2092.6 2297.0 False True 1514.96687095259 1729.9845485112946 1847.570911187351 2214.8550798623446 1848.237170607542 1707.9379648438744 1633.800523335721 1787.414419142678 1824.5355662295824 1619.880206626182 1726.591506025071 0.8774321347382974 1.0019651680634263 1.0700683425929718 1.2827904412441744 1.0704542239191952 0.9891963205447821 0.9462577092696512 1.0352271587722752 1.056726828472588 0.9381953988383981 1.0 10.75371108093867 -7.234629928729268 21.373950704033224 1.0190544081816466 1.0701642105208917 0.07143352364553057 0.09619093505581196 311.2375564869325 248132.9416840556 0.014212246193707555 0.02460627704822317 5.8259945130439486e-08 7.234629928729268 0.051109802339245114 EAPPMEKPEVVK ddPTM_A549_PD325901_60min_R1 2 EAPPMEKPEVVK 12 1 S4R456;K7EM56;A0A0B4J2B4;K7EJ78;S4R417;K7EQJ5;K7ELC2;P62841 S4R456 RPS15 40S ribosomal protein S15 0 ; 43.544 0.021012 5957300.0 5306.1 4957.9 4942.8 5362.1 6025.2 5616.6 6247.2 5842.299999999999 5445.8 5957.200000000001 6435.3 False True 5844.771365855634 5375.719632751563 5278.248131470976 5693.304738787333 5602.010737811585 5570.860271777796 6484.940614599014 5725.770743304315 5216.931964279632 5581.06137533789 5643.798896727792 1.0356094313077602 0.9525002097201481 0.935229661448646 1.0087717232604165 0.9925957392031748 0.9870763246025145 1.14903821579449 1.0145242323613 0.9243653184213114 0.9888838134494344 1.0 12.462450866526655 -4.411663959465704 3.962381572114421 0.9821433136446814 12.572556849092313 0.0 0.057647306115140434 3053.9137787714203 191.66298657757662 0.008676166749472922 318460.7549240372 3.875574060993256e-05 4.411663959465704 11.590413535447633 EAPPPVLLT(ph)PK ddPTM_A549_MK2206_60min_R1 2 EAPPPVLLTPK 11 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 EAPPPVLLT(1)PK;EAPPPVLLT(1)PK 123.64 6.7156e-06 24021000.0 8313.1 8387.7 8928.9 8759.6 11474.8 9362.8 7807.6 8549.3 12517.2 12015.2 12293.0 True False 9716.148044218466 8814.598103236664 10195.152282863062 10905.702393233381 9786.872120575646 10353.565281476354 9226.139856788634 9761.189456133181 9682.074185861002 9300.957975081194 9240.308830459811 1.0514960292441844 0.9539289503160508 1.1033345822009433 1.180231374657496 1.0591498942453244 1.12047827312295 0.998466612541729 1.056370478003542 1.0478085054846817 1.0065635408658051 1.0 13.173725354996838 -9.718169502496938 0.5143765677105515 1.000350201894799 1.0704766097678995 0.1596295219118411 0.056038471304754124 1.281359978410466 0.7220475722211054 0.0382977982344446 0.016521169271587918 1.913508948346817e-10 9.718169502496938 0.07012640787310054 EAPPPVLLT(ph)PK ddPTM_A549_PD325901_60min_R1 2 EAPPPVLLTPK 11 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 EAPPPVLLT(1)PK;EAPPPVLLT(1)PK 147.52 1.7462e-11 32521000.0 11920.2 14016.0 12373.099999999999 13287.3 15645.099999999999 13257.4 14041.2 13272.8 14457.599999999999 14061.400000000001 15545.8 True False 13130.329928812554 15197.177509156281 13212.812971494614 14108.026343352218 14546.242148664935 13149.436129876967 14575.545549639464 13008.063591689825 13849.997349658308 13173.560804266459 13633.765152945602 0.9630743805188489 1.1146720908473988 0.9691242898253942 1.0347857825836284 1.0669277331304325 0.9644757689724475 1.0690770587676133 0.9541064735796337 1.0158600499779027 0.9662452489450638 1.0 13.734896416920543 -8.250066202862262 24.986602523703592 1.0036950069346458 1.0267844955909216 0.0998089907978571 0.04906173822297558 1873.9885765694587 4117105.3395730574 0.006812944608884292 0.008766993015778508 5.6225560969206515e-09 8.250066202862262 0.023089488656275803 EAPS(ph)PTLR ddPTM_A549_MK2206_60min_R1 4 EAPSPTLR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.5)PT(0.5)LR;EAPS(0.872)PT(0.128)LR;EAPS(0.906)PT(0.094)LR;EAPS(0.857)PT(0.143)LR 107.57 0.0018176 112762500.0 7229.16 7253.3 6737.45 7255.11 8697.44 7210.65 7087.26 7421.9 10242.9 11105.0 10132.39 True False 8449.265472007122 7622.46198865082 7692.921720276379 9032.612275694262 7418.058097429101 7973.676196957909 8374.923403020632 8473.977053615485 7922.89950455019 8596.372787242542 7616.23792326224 1.1093752003466921 1.000817209946865 1.0100684613304851 1.185967713548706 0.9739793021397297 1.0469310803177443 1.0996142042045645 1.1126197919491796 1.0402641808695754 1.1286901582980597 1.0 12.894862832287604 -9.596016551033928 1.2653436749026854 1.0089415978173997 1.0637625211395545 0.0 0.06794305081939218 0.5508671101308524 1.8062810766568917 0.014479066956278402 0.010676106707754792 2.535032018171013e-10 9.596016551033928 0.054820923322154824 EAPS(ph)PTLR ddPTM_A549_PD325901_60min_R1 3 EAPSPTLR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.963)PT(0.037)LR;EAPS(0.993)PT(0.007)LR;EAPS(0.911)PT(0.089)LR 113.66 0.0013436 148531600.0 20727.75 20257.33 20295.15 20306.0 24113.629999999997 21637.81 22675.1 21481.43 20471.93 22979.440000000002 25277.8 True False 22832.01592103694 21964.486292205835 21672.500923651212 21560.255501727996 22419.971816307432 21461.598849353042 23538.01333879083 21052.96602679416 19611.565975154255 21528.51423670424 22168.79084917652 1.0299170611682258 0.990784136204782 0.9776131260878514 0.9725499080401524 1.0113303864355887 0.9680996584507113 1.0617635169608348 0.949666861401067 0.8846475258204146 0.9711181084783402 1.0 14.436242463084882 -8.48511400378984 24.92207613959562 0.9440347908550872 0.9988564708610591 0.29827884529035276 0.03646239944553128 598.0077530921354 394643.65907742555 0.00768866715478757 0.009293985625317918 3.27254778101843e-09 8.48511400378984 0.05482168000597187 EAPS(ph)PTLRR ddPTM_A549_MK2206_60min_R1 2 EAPSPTLRR 9 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.997)PT(0.003)LRR;EAPS(0.997)PT(0.003)LRR 141.08 1.6783e-05 206598000.0 5130.5 5023.299999999999 5239.9 4746.5 6534.6 5555.7 4580.8 5008.200000000001 7319.6 7294.299999999999 8355.2 True False 5996.402971317902 5278.9645137509315 5982.996611785797 5909.3927130784805 5573.368996332279 6143.600486424807 5413.07206516438 5718.127686969246 5661.722286999342 5646.512563888632 6280.373248210998 0.9547844904004731 0.8405494872863928 0.9526498466456733 0.9409301771613345 0.88742639586268 0.9782221921563099 0.8619029237961813 0.9104757728528458 0.9014945550588284 0.8990727685646829 1.0 12.616634586986224 -10.720969239800137 0.8905657012726623 1.0020712268917173 0.9130353311767706 0.0 0.04909469318779234 0.46933968881374505 0.6371136403913423 0.027865462150213 0.006592745007897208 1.9012129342218325e-11 10.720969239800137 -0.08903589571494674 EAPS(ph)PTLRR ddPTM_A549_PD325901_60min_R1 3 EAPSPTLRR 9 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.999)PT(0.001)LRR;EAPS(0.999)PT(0.001)LRR;EAPS(0.83)PT(0.17)LRR 147.62 1.1658e-05 293314000.0 10796.599999999999 10836.900000000001 12530.2 11948.2 12384.0 11559.599999999999 12227.9 13294.699999999999 13782.7 12276.400000000001 14917.599999999999 True False 11892.662883963165 11750.163595103857 13380.574722213656 12686.213177668982 11514.190562480686 11465.46245017316 12693.23942586362 13029.526779009602 13203.461049630336 11501.266008896468 13082.829770457702 0.9090283289336953 0.8981362443190132 1.022758451877765 0.9696841891435202 0.8800993947411014 0.8763748096809518 0.9702212478928821 0.9959257291898376 1.0092205800495113 0.8791114927496375 1.0 13.675387004044431 -8.006660251023709 5.04698935229057 1.0031791451751348 0.928442198231337 0.037724667059274575 0.054348773292270516 0.13643028831611842 10.201050327955539 0.00659935272770166 0.008890728183951965 9.847811997458439e-09 8.006660251023709 -0.07473694694379784 EAPSPT(ph)LR ddPTM_A549_PD325901_60min_R1 1 EAPSPTLR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.33)PT(0.67)LR 79.906 0.0042468 5267300.0 404.01 624.31 566.6 414.98 437.66 578.39 689.71 353.13 354.06 598.24 369.53 True False 445.0247977835576 676.9227947161356 605.0528832425863 440.6123721120398 406.92027144503356 573.6797836045937 715.9572914737937 346.08654512487436 339.18008947681614 560.4670243037231 324.08015264367174 1.3731936193971905 2.0887511598416726 1.8669853068967353 1.3595783898451073 1.2556161434928879 1.7701787009319216 2.2091982049298573 1.0679041659962398 1.046593216863073 1.7294086655160281 1.0 8.340206859429783 -8.385760927504968 8.7015771895975 1.0239933287286018 1.6961820618662629 0.25989553160097845 0.35196581478738115 0.17367302800009748 11.585745492861532 0.04644476600221187 0.05614803224330262 4.113761150688831e-09 8.385760927504968 0.672188733137661 EAQQKVPDEEENEES(ph)DNEKETEK ddPTM_A549_MK2206_60min_R1 5 EAQQKVPDEEENEESDNEKETEK 23 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(0.995)DNEKET(0.005)EK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(0.999)DNEKET(0.001)EK 232.47 6.867799999999999e-89 912336700.0 11037.84 13325.96 13512.41 13015.659999999998 17358.88 12833.24 12761.12 11538.440000000002 20916.7 20503.5 18440.44 True False 12900.757542721294 14004.194444222801 15428.672922586407 16204.497284295187 14805.41174716928 14191.24493878473 15079.650321387184 13174.04920499051 16179.100847106276 15871.745109700807 13861.169817747033 0.9307120331361871 1.0103183662242308 1.1130859173828485 1.1690569769622108 1.0681213737251307 1.0238129339282092 1.087906036767552 0.9504283821790586 1.1672247768288286 1.1450509097276589 1.0 13.758761398860349 -5.475109521797916 3.4910669662233333 1.075677674348695 0.9360948407539683 0.31897607067440026 0.06601144579651215 0.2576453534835824 5.89712026592348 0.01013434478665869 0.06928592349396212 3.348809771320506e-06 5.475109521797916 -0.13958283359472679 EAQQKVPDEEENEES(ph)DNEKETEK ddPTM_A549_PD325901_60min_R1 4 EAQQKVPDEEENEESDNEKETEK 23 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK 268.09 1.4238999999999995e-124 1569667000.0 32147.6 32364.399999999998 40188.3 38642.9 39439.600000000006 46261.8 45500.799999999996 48000.9 41030.5 44475.700000000004 44830.5 True False 35411.200686187694 35091.861570871675 42915.719709880024 41029.78416860655 36669.498555233644 45885.05923885092 47232.357842993115 47043.4843935224 39306.13077240727 41667.49671172958 39316.63270395401 0.9006671795325556 0.8925449398249851 1.0915410796500906 1.0435731990974968 0.9326713920631827 1.1670648293905477 1.2013327336204718 1.1965288265592315 0.9997328883267848 1.0597931167065369 1.0 15.262852146056703 -5.749616488659182 24.839319812474418 1.0405749849015624 0.89660595138378 0.3293450583553871 0.08745429586894254 222.00969674774254 466421.7428125173 0.013472201445871967 0.051315639603092864 1.779850444347952e-06 5.749616488659182 -0.14396903351778245 EAQSSQATPVQTSQPDSSNIVKVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EAQSSQATPVQTSQPDSSNIVKVSPR 26 1 H7C5E4;Q8IZH2-2;Q8IZH2 H7C5E4 XRN1 5-3 exoribonuclease 1 1 EAQSSQATPVQTSQPDS(0.097)S(0.074)NIVKVS(0.829)PR;EAQSSQATPVQTSQPDSSNIVKVS(1)PR 191.11 3.3730999999999996e-58 41298000.0 3189.9 3437.3 3698.3 3118.1 4375.1 3818.4 3717.7 3710.5 5058.5 4555.5 4555.8 True False 3728.2771344327048 3612.24388810465 4222.774550920324 3882.0346399768305 3731.5285856599226 4222.460553551216 4393.157967311739 4236.474737929675 3912.757826764599 3526.4093860678427 3424.469126316508 1.088716819135988 1.0548332470995643 1.233118008998523 1.133616480914955 1.0896662951298672 1.2330263167222824 1.2828727038451038 1.2371186837028347 1.1425881450341218 1.0297681935479983 1.0 11.74166463822638 -10.180932392603683 0.9127108155876522 1.0111050633299745 1.1674165710326516 0.40291585688726717 0.07042258311127403 0.3951370706319498 0.6508321499591158 0.03370194732530021 0.014551600225128029 6.592765180073854e-11 10.180932392603683 0.1563115077026771 EAQSSQATPVQTSQPDSSNIVKVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EAQSSQATPVQTSQPDSSNIVKVSPR 26 1 H7C5E4;Q8IZH2-2;Q8IZH2 H7C5E4 XRN1 5-3 exoribonuclease 1 1 EAQSSQATPVQTSQPDSSNIVKVS(1)PR;EAQSSQATPVQTSQPDSSNIVKVS(1)PR 241.51 6.504199999999999e-112 56244000.0 8396.1 9275.2 9150.8 9347.2 10492.6 9228.6 9077.5 10071.6 8437.7 9850.6 10688.599999999999 True False 9248.465891117858 10056.853655317238 9771.828316230605 9924.55531496857 9755.63597350492 9153.445341332574 9422.949229898595 9870.714036982647 8083.092811892144 9228.631434886089 9373.969960617946 0.9866114282393311 1.0728489314098757 1.042442887835586 1.0587355577907493 1.0407155148235416 0.9764747892075777 1.005225029468456 1.0529918570735375 0.8622913072957292 0.9844955204313162 1.0 13.194444456293942 -8.741242029461288 24.999927657890296 0.934970886328851 1.0301527002295965 0.39511405367287444 0.0434705355214015 181.47820068249092 224630.5191020611 0.009341054868012628 0.0105853195624068 1.814504169698287e-09 8.741242029461288 0.09518181390074554 EAQTLDS(ph)QIQETSI ddPTM_A549_PD325901_60min_R1 1 EAQTLDSQIQETSI 14 0 E7EVA0;P27816-4;P27816;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EAQT(0.01)LDS(0.973)QIQET(0.009)S(0.008)I 44.457 0.057573 457620.0 0.0 0.0 0.0 0.0 0.0 138.2 0.0 308.93 0.0 208.76 0.0 True False 0.0 0.0 0.0 0.0 0.0 137.07454502006397 0.0 302.7681487991032 0.0 195.57885797279553 0.0 0.0 EAQTLDSQIQET(ph)SI ddPTM_A549_MK2206_60min_R1 1 EAQTLDSQIQETSI 14 0 E7EVA0;P27816-4;P27816;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EAQTLDSQIQET(0.596)S(0.404)I 108.3 1.6432e-05 8895900.0 438.8 321.74 240.3 138.26 359.82 183.87 423.14 256.89 512.95 431.31 610.47 True False 512.8587123700019 338.1151917373492 274.37815336401985 172.13370620672725 306.8909546506716 203.32700135697206 500.0190607871231 293.3049441926303 396.76764401283043 333.8767714421955 458.8734508851217 1.1176473848743 0.7368375552892814 0.597938609947408 0.37512239131442077 0.6687921344298937 0.4431003819566686 1.089666573262488 0.6391848201870776 0.8646559160210832 0.7276009775640322 1.0 8.841952528701018 -8.910837082648184 0.7222370673394193 0.9721408720730583 0.6714887316129229 0.04402734882314685 0.22902825402999608 0.6221179328531938 0.6911857107555893 0.06117761791041253 0.05668382672981733 1.2278997681207107e-09 8.910837082648184 -0.30065214046013544 EAQTLDSQIQET(ph)SI ddPTM_A549_PD325901_60min_R1 1 EAQTLDSQIQETSI 14 0 E7EVA0;P27816-4;P27816;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EAQTLDSQIQET(0.582)S(0.418)I 92.46799999999999 6.4883e-05 13704000.0 241.0 178.32 206.92 294.42 614.3 502.27 305.61 321.23 377.17 369.73 428.83 True False 265.4661425851769 193.34765221409447 220.9628355110412 312.6056547236654 571.1536872199518 498.1796796470877 317.2401557862087 314.82281564994 361.3188565440059 346.3851847014833 376.0866285773437 0.705864347236644 0.5141040322158962 0.5875317512534198 0.8312065119310054 1.5186758683245551 1.3246407656969785 0.8435294734786536 0.837101858262944 0.960733057462848 0.9210249936611289 1.0 8.554921203336972 -6.52059625638494 24.999631639308095 1.0225961701349866 0.6129451641287875 0.49795001718478304 0.1994316349618321 62.649003725330154 686179.0624246586 0.02998131209244653 0.06324212977145097 3.0158083797859553e-07 6.52059625638494 -0.4096510060061991 EAQTLDSQIQETS(ph)I ddPTM_A549_MK2206_60min_R1 1 EAQTLDSQIQETSI 14 0 E7EVA0;P27816-4;P27816;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EAQTLDSQIQET(0.088)S(0.912)I 139.89 6.4464e-10 14899000.0 109.74 314.28 311.26 223.48 497.09 343.41 415.16 420.2 590.75 282.07 640.21 True False 128.26142911459445 330.2755096015853 355.40134838154285 278.2326100323985 423.9687194911409 379.7494182628913 490.5891980819165 479.7646368085298 456.9460682339012 218.35019109387702 481.228188102878 0.26652933532475126 0.6863178794733826 0.7385297810226453 0.5781718879130109 0.8810138931439818 0.7891254661535073 1.0194523309533092 0.9969587166119303 0.9495413600672418 0.4537352476268444 1.0 8.910577341110772 -5.323575892895664 0.41897843375226357 0.9902795895820281 3.5067079102330454e-18 0.3546283436282248 0.1889847652547774 1.4867121153592773 0.1785346230872939 0.02179970831880329 0.7250967339794833 4.74705329007873e-06 5.323575892895664 -0.9902795895820281 EAQTLDSQIQETS(ph)I ddPTM_A549_PD325901_60min_R1 1 EAQTLDSQIQETSI 14 0 E7EVA0;P27816-4;P27816;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EAQTLDSQIQET(0.079)S(0.921)I 180.28 8.882999999999999e-24 16275000.0 785.03 368.28 408.72 637.41 644.84 529.87 667.4 538.68 613.03 899.65 613.76 True False 864.7256676914585 399.31624807877233 436.4581970330212 676.781368036858 599.5486629772327 525.5549143978387 692.7982722152933 527.9356048137153 587.2664809692503 842.8459454647706 538.2714109452003 1.6064863377622214 0.7418492603528324 0.8108515298380868 1.257323636877603 1.1138408074180088 0.9763753075329944 1.2870798227956137 0.9807981514133634 1.09102298399615 1.5658382153061778 1.0 9.07218999171968 -10.75168181396838 0.7422977161038657 0.9932171745071614 1.0825991348224384 0.0 0.28229114984361325 3.8909955372765634 3.3199151377276217 0.2151967084148171 0.040768278646604914 1.7714063045697547e-11 10.75168181396838 0.08938196031527701 EARDPLPDAGAS(ph)PAPSR ddPTM_A549_MK2206_60min_R1 1 EARDPLPDAGASPAPSR 17 1 O15297-2;O15297 O15297-2 PPM1D Protein phosphatase 1D 1 EARDPLPDAGAS(0.991)PAPS(0.009)R 65.184 0.00069864 3694200.0 396.23 408.53 293.59 262.05 587.2 320.58 417.43 265.39 505.63 420.95 623.05 True False 463.1039371065769 429.32243202728637 335.225476679744 326.25226176387173 500.8236578591362 354.5035628162186 493.27162769856074 303.0098452227882 391.10561232519206 325.8571026375281 468.3294896947843 0.9888421448933038 0.9167102253310607 0.7157898104990449 0.6966297637513582 1.0693831349068552 0.7569533215754846 1.0532576712605297 0.6470014207737873 0.8351078053617339 0.6957860006848873 1.0 8.871380074057534 -10.63615458187023 0.9993800190071507 0.9968201917763517 0.8507452252438424 0.0 0.16300837825848158 0.796459493424562 1.4631691121502683 0.07807293553720597 0.023008909478567128 2.311241985108752e-11 10.63615458187023 -0.1460749665325093 EARIS(ph)PLGDR ddPTM_A549_MK2206_60min_R1 1 EARISPLGDR 10 1 A0A087X275;A0A087WZE8;A0A087WY72;A0A087WVC8;Q8NDB6 A0A087X275 FAM156A;FAM156B Protein FAM156A/FAM156B 1 EARIS(1)PLGDR 56.568999999999996 0.0041621 1702900.0 295.14 309.4 510.39 489.84 659.03 275.49 278.24 279.7 606.1 702.89 934.19 True False 344.95241651978665 325.14713844575067 582.7709766769123 609.8508219897535 562.0875600117621 304.6421689445381 328.79260640310366 319.34833154532555 468.81931774281406 544.106660821694 702.204840667636 0.4912418663930256 0.4630374494949511 0.8299159204354538 0.8684799458373501 0.8004609587671677 0.43383661191354533 0.46822890894699215 0.4547794504545119 0.6676389716953165 0.7748546140815168 1.0 9.455748131284082 -10.220580196956583 0.8554832582601698 0.9811694730199021 0.6130469573775267 0.2628008632938137 0.16741746727502446 0.4245306873897354 0.6062277706800897 0.08544614657180549 0.03384423043017671 6.017551323458546e-11 10.220580196956583 -0.3681225156423754 EARIS(ph)PLGDR ddPTM_A549_PD325901_60min_R1 1 EARISPLGDR 10 1 A0A087X275;A0A087WZE8;A0A087WY72;A0A087WVC8;Q8NDB6 A0A087X275 FAM156A;FAM156B Protein FAM156A/FAM156B 1 EARIS(1)PLGDR 51.726000000000006 0.0068593000000000005 3884600.0 782.39 784.39 802.27 833.72 865.78 667.14 903.01 839.18 775.82 875.53 855.74 True False 861.8176568349234 850.4932981169442 856.7168666414221 885.2169908844998 804.9705995788541 661.7070330295619 937.3745396960326 822.4418965760251 743.2149833867247 820.2488863811149 750.4894049828044 1.1483408707877358 1.1332515722009842 1.141544252261698 1.1795196374621468 1.0725942221626672 0.8817006990854498 1.2490176856227706 1.0958740937786713 0.9903070962124424 1.092951986976963 1.0 9.551687894549854 -7.54780095201567 0.3517140380314533 0.9843860150423211 1.1733243291134698 0.08380080819805702 0.09262392605769378 1.5544102750161057 0.3914633351399769 0.04016878413258745 0.10766424466744741 2.8326899907426056e-08 7.54780095201567 0.1889383140711487 EARNS(ph)WDSPAFSNDVIR ddPTM_A549_MK2206_60min_R1 4 EARNSWDSPAFSNDVIR 17 1 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 EARNS(1)WDSPAFSNDVIR;EARNS(1)WDSPAFSNDVIR;EARNS(1)WDSPAFSNDVIR;EARNS(1)WDSPAFSNDVIR 111.45 1.2495e-09 16473600.0 5178.610000000001 4356.89 4090.0299999999997 4288.99 7321.700000000001 5031.139999999999 4936.26 4712.3099999999995 8040.2 7661.4 8319.7 True False 6052.6327631413305 4578.637091218185 4670.0577553201865 5339.792742540074 6244.687628997345 5563.531895399556 5833.114546015611 5380.294373344129 6219.107537561088 5930.684418926615 6253.68887796116 0.9678499972187011 0.7321498047902442 0.7467684828035014 0.853862871457872 0.9985606496998057 0.8896400195101151 0.932747800513756 0.8603393098599786 0.9944702493080618 0.9483497715767639 1.0 12.610491731397435 -7.5280905343637725 0.44486803560726995 1.0045244561701503 0.8032573903552741 0.2761721968232449 0.07783151472079547 0.8013242796409972 0.31271603696889055 0.023492222479983293 0.06299122237808202 2.9642133960684434e-08 7.5280905343637725 -0.2012670658148762 EARNS(ph)WDSPAFSNDVIR ddPTM_A549_PD325901_60min_R1 2 EARNSWDSPAFSNDVIR 17 1 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 EARNS(1)WDSPAFSNDVIR;EARNS(1)WDSPAFSNDVIR 205.43 2.7031999999999997e-49 31688000.0 5176.1 4744.700000000001 4242.1 4708.3 4633.5 5191.5 4602.5 4731.1 5728.9 5804.5 6539.7 True False 5701.573861556578 5144.552520526098 4529.99441581958 4999.120997674871 4308.0589447072225 5149.222145236338 4777.650656084639 4636.734499023849 5488.134255786397 5438.0028793978345 5735.358358573916 0.9941094357309281 0.8969888538586941 0.7898363332515378 0.871631846718274 0.7511403255678014 0.8978030357141765 0.8330169376325757 0.8084472162218582 0.9568947418223767 0.9481539843571312 1.0 12.485667916672213 -8.885468930104528 5.065956523000323 0.9813940788842898 0.8525225293458586 0.3940735794091862 0.06222664902076588 0.1321764657453481 5.2624566754443665 0.010737198720944826 0.011346924133541124 1.3017604415935477e-09 8.885468930104528 -0.12887154953843116 EARS(ph)PQPNK ddPTM_A549_MK2206_60min_R1 4 EARSPQPNK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EARS(1)PQPNK;EARS(1)PQPNK;EARS(1)PQPNK;EARS(1)PQPNK 86.014 0.0010194 1380080000.0 34320.9 25436.4 18822.7 15316.3 14408.2 12578.599999999999 12082.3 12605.7 15926.4 40568.0 41795.7 True False 40113.42885455697 26731.004112351293 21492.041894818696 19068.794187574837 12288.772866427134 13909.659103001071 14277.497514175599 14392.596578337176 12319.095829234697 31403.660624300355 31416.67418736267 1.2768197109384851 0.8508540386207976 0.6840966604754061 0.6069641259241005 0.3911544803609506 0.44274766386940534 0.4544560455071565 0.4581196753196296 0.39211966727496705 0.9995857752801998 1.0 14.939242842569898 -5.275171719061111 1.7009876779283324 0.6233946818062784 1.4941861290342398 0.47611114627549334 0.20903047130526467 0.7906257862612952 2.240318983191836 0.03673722311560072 1.1079544394077827 5.306745752096749e-06 5.275171719061111 0.8707914472279613 EARS(ph)PQPNK ddPTM_A549_PD325901_60min_R1 5 EARSPQPNK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EARS(1)PQPNK;EARS(1)PQPNK;EARS(1)PQPNK;EARS(1)PQPNK;EARS(1)PQPNK 110.39 0.00030212 2857879900.0 40452.21 37574.9 33015.909999999996 28765.369999999995 34078.909999999996 27037.11 23142.24 27918.969999999998 33990.52 38665.22 48476.09 True False 44558.888579856946 40741.46869212302 35256.568193395244 30542.141574004778 31685.324927457095 26816.928740285246 24022.930607119633 27362.10424134172 32562.01664961734 36223.89141055227 42513.83824525307 1.0481031687331175 0.9583107612418893 0.8292962867762675 0.7184047085519265 0.7452943849640524 0.6307811726051228 0.5650614387846278 0.6436046560532996 0.7659157110626935 0.8520494245093687 1.0 15.375644894170374 -5.638401709462764 2.7628249397826363 0.8075074612945832 1.0377741131000044 0.31826270488756037 0.12425531822046323 0.37227682955504815 5.332204372391364 0.02337576766625315 0.13244135747650024 2.299314036481491e-06 5.638401709462764 0.23026665180542127 EARS(ph)PQPNKR ddPTM_A549_MK2206_60min_R1 4 EARSPQPNKR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EARS(1)PQPNKR;EARS(1)PQPNKR;EARS(1)PQPNKR;EARS(1)PQPNKR 71.558 0.00052731 98181000.0 10127.1 10328.5 8351.699999999999 5895.010000000001 6404.990000000001 5051.969999999999 5609.19 5682.29 6826.6 15251.8 14945.199999999999 True False 11836.306896176506 10854.176533409609 9536.096643571711 7339.287714637052 5462.824455638949 5586.5661121737185 6628.307216468603 6487.772008783294 5280.385999840116 11806.407787164862 11233.894373463598 1.0536245493046392 0.9661989130901081 0.8488682843678521 0.6533164253327608 0.4862805607771323 0.49729558837317844 0.5900275537685142 0.5775176259542313 0.470040559782483 1.0509630404798571 1.0 13.455570522722223 -5.931103225055609 2.3439524820151667 0.679464060243179 1.025163300272502 0.3461932323960145 0.18534563659952613 0.32232722258471297 3.464603112091915 0.03137618795111521 0.13099396813422665 1.1719167860172558e-06 5.931103225055609 0.34569924002932306 EARS(ph)PQPNKR ddPTM_A549_PD325901_60min_R1 3 EARSPQPNKR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EARS(1)PQPNKR;EARS(1)PQPNKR;EARS(1)PQPNKR 99.844 9.553e-05 356042000.0 9837.7 9435.5 9275.8 9233.0 9480.9 7056.900000000001 6747.1 7100.5 9204.7 10948.2 10823.2 True False 10836.41606186804 10230.662698890128 9905.311567916662 9803.301440335594 8814.99429132939 6999.430946107742 7003.864582654788 6958.874957265504 8817.858469206496 10256.928783568503 9492.015013917651 1.1416349474773442 1.0778177956829436 1.0435414981321685 1.0327945568945602 0.9286747101015348 0.7374020095674984 0.737869100753147 0.7331293668480365 0.9289764561346906 1.0805849725826706 1.0 13.212498667166916 -6.627634344355534 2.6744782621321224 0.9101534754392453 1.0841757404876944 0.41069210046720483 0.11011740951240236 0.2784382903019534 4.016383329966424 0.017940735366044475 0.04146157734208547 2.3570329602259698e-07 6.627634344355534 0.1740222650484491 EAS(ph)LQFVVEPSEATNR ddPTM_A549_PD325901_60min_R1 1 EASLQFVVEPSEATNR 16 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 EAS(1)LQFVVEPSEATNR 125.45 2.5482e-08 3129500.0 2111.6 2146.3 2127.7 2478.5 2789.2 2465.5 2135.7 2228.5 2598.2 2243.3 3177.6 True False 2325.9680775222396 2327.176233440504 2272.098516899489 2631.591315918095 2593.296214217632 2445.42178543392 2216.975232199883 2184.0508192755697 2489.0066894838833 2101.657655156026 2786.775344466028 0.8346449892852474 0.8350785211523437 0.8153145611150239 0.944314123183235 0.9305723977239119 0.8775094807301324 0.7955342495053817 0.7837197295478635 0.8931493865935577 0.7541539576663375 1.0 11.444380989117287 -9.957816013327692 0.8818684552759941 0.9889775681295846 0.8565055178068375 0.0 0.08595831118216893 0.3286931779932843 0.5204926946832976 0.021760054158129843 0.010971135835275281 1.1020060699913974e-10 9.957816013327692 -0.13247205032274711 EAS(ph)PAPLAQGEPGR ddPTM_A549_MK2206_60min_R1 2 EASPAPLAQGEPGR 14 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(1)PAPLAQGEPGR;EAS(1)PAPLAQGEPGR 123.76 1.1501e-06 20083000.0 1835.17 2320.84 1943.01 1476.99 2295.2 1809.38 1551.76 1503.88 2222.72 2595.5 3047.3 True False 2144.9018304012243 2438.960842890872 2218.558034822404 1838.8526163046004 1957.5791204330549 2000.8473906307613 1833.6947056932142 1717.059595439343 1719.2774689544756 2009.1747473469636 2290.5713087985187 0.9364047397966829 1.0647827611925291 0.9685609988654367 0.8027921284271827 0.8546248322039233 0.8735145607321314 0.8005403274936891 0.7496206683650457 0.7505889305215712 0.8771500540626448 1.0 11.161491761400839 -6.108506493593228 5.343476109803119 0.8579269981786039 1.0042455985758614 0.4467745784738594 0.07311200144346286 0.22737175777819146 9.311794245508528 0.01432932639713935 0.03920220482622463 7.789211679975997e-07 6.108506493593228 0.14631860039725753 EAS(ph)PAPLAQGEPGR ddPTM_A549_PD325901_60min_R1 2 EASPAPLAQGEPGR 14 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(1)PAPLAQGEPGR;EAS(1)PAPLAQGEPGR 134.81 5.5086e-09 25105000.0 3340.1 2974.1000000000004 2524.7200000000003 3004.2 3291.3 3211.6 3011.1 2823.1000000000004 3107.8 2600.6 3864.4 True False 3679.184493148339 3224.7378446048588 2696.062681574695 3189.76261096677 3060.130442368594 3185.445794402585 3125.6890582371434 2766.791055820894 2977.1899736656196 2436.397672178827 3389.103298449937 1.0855923142947796 0.9515017869416216 0.7955091492217969 0.9411818791199611 0.9029321837927441 0.9399081449832177 0.9222761252708731 0.8163784966620322 0.8784594954740055 0.7188915349063436 1.0 11.726687894895111 -10.87318673961552 1.1836718439039553 0.9988291686164477 0.908674755225228 0.0 0.1103103965555404 0.6578458028066807 1.6698731896162744 0.04682173570983813 0.011940171278048224 1.3391007719055277e-11 10.87318673961552 -0.09015441339121966 EAS(ph)PAPLAQGEPGREDLPTR ddPTM_A549_MK2206_60min_R1 6 EASPAPLAQGEPGREDLPTR 20 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(1)PAPLAQGEPGREDLPTR;EAS(0.999)PAPLAQGEPGREDLPT(0.001)R;EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR 135.3 1.3278000000000001e-17 489425700.0 5266.07 5438.0 4886.74 4828.43 8153.08 5869.26 5367.45 5190.38 8041.38 8472.17 8248.48 True False 6154.853872949632 5714.770972424019 5579.753213358677 6011.39556675646 6953.772732319767 6490.341197500525 6342.646187601844 5926.132259872101 6220.020269445157 6558.30091282239 6200.154769533165 0.9926935861656009 0.9217142450226784 0.8999377307122932 0.9695557272692215 1.1215482501323666 1.0468030942377926 1.0229819130917288 0.9558039242814423 1.0032040329073089 1.0577640650277174 1.0 12.598088513460166 -6.5268118027970665 24.999944698692353 1.0114032775929482 0.9361870199473821 0.4068059794408252 0.04639108854238636 92.52795131562624 588141.3859027298 0.006472157468165909 0.013520013627261575 2.972954052771585e-07 6.5268118027970665 -0.07521625764556616 EAS(ph)PAPLAQGEPGREDLPTR ddPTM_A549_PD325901_60min_R1 4 EASPAPLAQGEPGREDLPTR 20 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR 173.45 4.890499999999999e-35 627876800.0 3461.66 3468.0299999999997 4203.27 4504.33 4023.4300000000003 3258.49 4244.07 3635.5 4176.45 4124.860000000001 3854.55 True False 3813.0851748605983 3760.2930591523423 4488.529178515825 4782.552234024348 3740.8381568799814 3231.9539377889173 4405.580406294214 3562.987100505423 4000.9283304961027 3864.415635646989 3380.4647860056407 1.12797659974034 1.1123597780752235 1.3277846280479892 1.4147617374459962 1.1066046812160875 0.9560679203547616 1.3032469453704474 1.0539932601148172 1.1835438567675785 1.1431610385781255 1.0 11.72300590346722 -14.999999999998941 0.19046670225057363 0.18714515190167907 1.2168405891626863 0.05873291343538922 0.1304600598909481 55.26341445138273 0.6337877313455221 16.731698852248403 0.12333093961121944 1.0000000000024379e-15 14.999999999998941 1.0296954372610072 EAS(ph)PAPLAQGEPGREDLPTRLPALGEAHVS(ph)PEVATADK ddPTM_A549_PD325901_60min_R1 2 EASPAPLAQGEPGREDLPTRLPALGEAHVSPEVATADK 38 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 2 EAS(0.986)PAPLAQGEPGREDLPT(0.017)RLPALGEAHVS(0.997)PEVATADK;EAS(0.999)PAPLAQGEPGREDLPT(0.01)RLPALGEAHVS(0.99)PEVAT(0.002)ADK 73.12100000000001 1.1708e-05 14745500.0 1142.3600000000001 1477.65 1042.98 1189.55 1490.79 1200.55 1305.92 1352.47 1210.76 1330.77 1583.5 True False 1258.3315462390153 1602.1767513131265 1113.7628947482403 1263.0258018359364 1386.0820533463007 1190.773118841084 1355.6175002268437 1325.4939248578098 1159.8759677313165 1246.7449550893714 1388.7395386335456 0.9060961477896383 1.1536913198925647 0.8019955245489234 0.9094763753026679 0.9980864048201149 0.8574488489128412 0.9761495676580992 0.9544582608788064 0.8352005077010912 0.8977529049947766 1.0 10.439560328504465 -5.763161717876199 24.999999974790356 0.9203678981015806 1.0298936962429612 0.22694044815818115 0.08155383106939626 50.138614295015365 727829.5651385867 0.011527429578102223 0.03878646895327982 1.725195362801528e-06 5.763161717876199 0.10952579814138064 EAS(ph)PSTLNDK ddPTM_A549_MK2206_60min_R1 1 EASPSTLNDK 10 0 P54253 P54253 ATXN1 Ataxin-1 1 EAS(0.845)PS(0.125)T(0.03)LNDK 93.01100000000001 0.00060807 21032000.0 3722.9 3279.6 3291.8 3540.1 4902.0 3806.7 3563.1 4020.6 5256.5 5048.0 5463.0 True False 4351.2345038338235 3446.5176316958077 3758.626738425636 4407.42465892113 4180.922293640133 4209.52246731705 4210.46914848655 4590.532362571096 4065.91114290563 3907.65329401174 4106.386328870245 1.0596261908535385 0.8393067177982785 0.9153125004338584 1.0733097925868331 1.0181512304981772 1.025116033949777 1.0253465726993447 1.1179007513971657 0.9901433565370966 0.9516039118235666 1.0 12.003653647258739 -6.239858865857469 24.2912943430639 1.0140815753296728 0.9282042777870932 0.25527633201639743 0.06365182999763988 550.8309564079983 620020.569811927 0.008131328442837213 0.021489902617829123 5.756269703831158e-07 6.239858865857469 -0.08587729754257956 EAS(ph)SSEEPR ddPTM_A549_MK2206_60min_R1 1 EASSSEEPR 9 0 P30414 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 EAS(0.931)S(0.053)S(0.016)EEPR 88.134 0.00077663 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAS(ph)SSEEPR ddPTM_A549_PD325901_60min_R1 2 EASSSEEPR 9 0 P30414 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 EAS(0.922)S(0.072)S(0.006)EEPR;EAS(0.773)S(0.223)S(0.004)EEPR 107.45 8.608600000000001e-06 10259000.0 1459.2 1223.2 1346.1 1394.7 1563.7 1303.0 1318.6 1231.1 1188.8 1668.4 1487.1 True False 1607.336909793736 1326.283356820774 1437.4544407568756 1480.8474514064822 1453.8711064721463 1292.3888000082732 1368.7800445656064 1206.5447447207325 1138.8388701633596 1563.0569392690745 1304.1961275035962 1.2324349657979672 1.0169355121146202 1.1021765901945695 1.1354484346162106 1.1147641645394606 0.9909466626634417 1.049520095712623 0.9251252317626634 0.8732113569017014 1.1984830397104247 1.0 10.348945125780395 -7.640780241956428 1.30405852131611 0.9390583007968971 1.1158766224394074 0.12017551735483467 0.09908838784537151 0.22740351760299765 0.7813395061696482 0.01141417529987789 0.01946954439145875 2.286755635532461e-08 7.640780241956428 0.17681832164251032 EASQTSS(ph)SPAPK ddPTM_A549_MK2206_60min_R1 1 EASQTSSSPAPK 12 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 EASQT(0.004)S(0.14)S(0.428)S(0.428)PAPK 148.08 5.2813e-12 33920000.0 7968.5 9743.5 9246.1 8692.3 9745.4 7806.0 7950.9 7662.0 10807.0 14607.0 14463.0 True False 9313.38798887959 10239.402532146643 10557.336012563715 10821.913890212178 8311.86456965332 8632.025738796565 9395.475611883398 8748.111963890891 8359.231755232788 11307.268554997916 10871.43794150657 0.8566840963440144 0.94186275884013 0.9711076004266528 0.9954445721384001 0.7645598139248042 0.7940095675697095 0.8642348567351861 0.8046876605431437 0.7689168443226527 1.0400895093948306 1.0 13.408255154678152 -6.736258985517326 24.999499757954908 0.8651136383488625 0.9434476496490242 0.15223274382017604 0.08938316973480527 396.75856135149985 393906.21272302483 0.014274875437574417 0.029706656618518287 1.8354434755542294e-07 6.736258985517326 0.07833401130016171 EASQTSS(ph)SPAPK ddPTM_A549_PD325901_60min_R1 1 EASQTSSSPAPK 12 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 EASQT(0.009)S(0.161)S(0.415)S(0.415)PAPK 132.21 5.9839e-08 52632000.0 12018.0 12799.0 12739.0 12507.0 15215.0 14324.0 13558.0 13985.0 13278.0 13721.0 15237.0 True False 13238.058512816002 13877.616648094412 13603.545145830045 13279.5289845421 14146.350888900499 14207.350093107067 14073.957109222267 13706.058203979734 12719.971835488797 12854.653718359486 13362.945595301126 0.990654225028871 1.0385147907040992 1.0180049786787668 0.993757618021856 1.0586251951721517 1.0631899974286256 1.0532076935321175 1.0256764203843842 0.9518838301610373 0.9619625872666598 1.0 13.705950435814229 -8.669125172532292 7.160501284880898 0.9773386216830361 1.0319989919959063 0.5176432471198122 0.02514482792298203 0.15408488786188435 10.295457310835385 0.004807570400034429 0.005447041760627979 2.142273065316531e-09 8.669125172532292 0.05466037031287019 EASQTSSS(ph)PAPK ddPTM_A549_MK2206_60min_R1 1 EASQTSSSPAPK 12 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 EASQT(0.005)S(0.074)S(0.226)S(0.695)PAPK 152.95 1.025e-12 40831000.0 8760.7 10918.0 9872.0 8879.8 12115.0 7942.5 8204.2 8239.0 11211.0 14443.0 14371.0 True False 10239.291981449136 11473.679565451532 11271.998044151484 11055.35139862937 10332.89954864346 8782.970078195192 9694.796943115083 9406.903480879286 8671.726400288217 11180.316268900864 10802.284080577398 0.9478821242869805 1.062153103905248 1.0434828375249485 1.0234272044841877 0.9565476589550265 0.8130660157315295 0.8974765772496591 0.870825411617621 0.8027678531321035 1.0349955792222842 1.0 13.399048773726951 -6.951878985768201 4.136699032634005 0.8946202827163715 1.0230157192979163 0.36796008032718963 0.07026872355863993 0.18157962684519935 6.634141708324504 0.011467773346319095 0.022005553018755154 1.1171745001351154e-07 6.951878985768201 0.12839543658154484 EASQTSSS(ph)PAPK ddPTM_A549_PD325901_60min_R1 1 EASQTSSSPAPK 12 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 EASQT(0.001)S(0.03)S(0.1)S(0.869)PAPK 147.7 5.6186e-12 53638000.0 10913.0 9959.0 9720.9 11020.0 12733.0 10954.0 10614.0 12207.0 11352.0 11555.0 11885.0 True False 12020.879726274012 10798.279881113545 10380.618730520393 11700.680371764127 11838.678006465332 10864.794255787128 11017.921578203654 11963.521808793756 10874.914917643395 10825.415328011364 10423.220345222411 1.1532788647017238 1.0359830765798832 0.9959128164529741 1.122559054134095 1.1357984974280728 1.0423644416926403 1.0570554217683625 1.1477759667891274 1.0433354143403504 1.0385864415668142 1.0 13.347513459306072 -9.296313658823406 1.7281706064777642 1.0131656744861521 1.0818531726970333 0.2005174301364986 0.049893512117789945 0.31320188975827346 1.9283875392566245 0.01065640296965691 0.009409887798828915 5.054594741044757e-10 9.296313658823406 0.06868749821088116 EASRPPEEPSAPS(ph)PTLPAQFK ddPTM_A549_MK2206_60min_R1 2 EASRPPEEPSAPSPTLPAQFK 21 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 EASRPPEEPS(0.012)APS(0.978)PT(0.011)LPAQFK;EASRPPEEPS(0.003)APS(0.992)PT(0.005)LPAQFK 137.24 1.6694000000000001e-18 113682000.0 5431.9 6472.9 5577.9 5018.7 6418.0 5673.0 5762.4 4671.799999999999 8393.6 7632.5 8497.2 True False 6348.671922795387 6802.342962008726 6368.930094253707 6248.281725298004 5473.920701873187 6273.313094567371 6809.353490286244 5334.041956787454 6492.463001824916 5908.312948998535 6387.110729210373 0.9939818161850251 1.0650109651143762 0.9971535431703852 0.9782641933421542 0.857026116181004 0.9821832375439229 1.0661085706788853 0.8351259564662177 1.016494511694111 0.9250368749641152 1.0 12.640947746461684 EASRPPEEPSAPS(ph)PTLPAQFK ddPTM_A549_PD325901_60min_R1 2 EASRPPEEPSAPSPTLPAQFK 21 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 EASRPPEEPS(0.001)APS(0.981)PT(0.019)LPAQFK;EASRPPEEPS(0.01)APS(0.983)PT(0.007)LPAQFK 145.2 3.3215e-22 225490000.0 5907.8 6071.0 6916.8 6383.9 7728.7 7259.8 7208.7 7124.7 6963.0 7421.2 8093.200000000001 True False 6507.555506907506 6582.624476176352 7386.2156420972815 6778.2190041111635 7185.862774567542 7200.678595779019 7483.031023252001 6982.592269280979 6670.369324484751 6952.624165490086 7097.787707021791 0.9168427932085976 0.9274191829750287 1.0406363147196063 0.9549762945721129 1.0124088055576275 1.0144961913492339 1.0542765340599145 0.9837702334169772 0.9397814642843998 0.9795480581381582 1.0 12.79315370907403 -5.600367681189434 11.144018405396537 0.9852875923065659 0.9194847320011276 0.38746651662461473 0.03392528693459013 0.38922956132023734 53.41039964186101 0.005316066201615066 0.020616592325800206 2.5097607251442796e-06 5.600367681189434 -0.06580286030543836 EASS(ph)SSPEAGEGQIR ddPTM_A549_MK2206_60min_R1 1 EASSSSPEAGEGQIR 15 0 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial 1 EAS(0.015)S(0.765)S(0.11)S(0.11)PEAGEGQIR 57.136 0.010919 2128600.0 0.0 0.0 244.45 111.39 370.63 218.94 208.38 87.584 342.36 253.49 343.53 True False 0.0 0.0 279.11668576710196 138.6805550004871 316.110817970592 242.10808547939016 246.23994868559052 99.99930021475076 264.8160066365777 196.22643294354907 258.22202005432837 0.0 0.0 1.080917443478978 0.5370593684121499 1.2241822672755955 0.9375965900524366 0.953597793998293 0.3872609322540018 1.0255361126090718 0.7599136313094608 1.0 8.012468222443891 -5.756522334819329 24.999999997816335 0.9476865165145065 4.929978664651194e-09 0.6625800518179914 0.23761786423776068 44.04704924099282 223942.73425292392 0.030523201707635346 0.11115087800386096 1.7517723420556979e-06 5.756522334819329 -0.9476865115845279 EASSS(ph)SPEAGEGQIR ddPTM_A549_MK2206_60min_R1 1 EASSSSPEAGEGQIR 15 0 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial 1 EAS(0.006)S(0.024)S(0.485)S(0.485)PEAGEGQIR 49.298 0.02544 1668200.0 519.03 502.85 693.65 386.55 923.84 709.41 499.19 538.08 649.14 639.11 688.52 True False 606.6295749348276 528.4429171539937 792.02000033688 481.2547673528888 787.9443598034478 784.4792953317541 589.8863613799786 614.3544878008893 502.11082646357073 494.73460711882785 517.5414818147068 1.1721371063972348 1.021063887093769 1.5303507605994056 0.9298863651767926 1.522475757963595 1.5157805178843962 1.1397856637724995 1.1870632778008778 0.9701846984380266 0.9559322769338046 1.0 9.015530691439707 -8.543053938908411 2.079707594418011 0.9848546768148952 1.2713666975948994 0.299859559026148 0.19028012260728105 0.27404532549850635 2.3416571879477375 0.0326276005843405 0.03803485864616157 2.863822264167179e-09 8.543053938908411 0.28651202078000415 EASSS(ph)SPEAGEGQIR ddPTM_A549_PD325901_60min_R1 1 EASSSSPEAGEGQIR 15 0 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial 1 EAS(0.017)S(0.111)S(0.781)S(0.092)PEAGEGQIR 74.76899999999999 0.00070946 2317200.0 375.3 459.78 437.17 488.7 378.25 479.66 372.06 483.92 426.68 562.91 421.93 True False 413.4001797187423 498.52727419805024 466.8389851167695 518.8858890817725 351.68302489166035 475.75380799076646 386.21894689904383 474.26783597210414 408.7481234196688 527.3677665331786 370.0352848346396 1.1171912427310318 1.347242532346154 1.2616066744158987 1.4022605690526266 0.9504040271424915 1.2856984927893298 1.0437354563947498 1.2816827351587396 1.1046193165128269 1.4251823762397344 1.0 8.531519035729373 -8.98759984353895 0.2509299252480287 0.9518816173330621 1.2915212374986609 0.0 0.1787295176789363 1.5510201708077065 0.3348421356472639 0.19447262956080072 0.14585229828010401 1.0289639429962596e-09 8.98759984353895 0.3396396201655988 EASSSS(ph)PEAGEGQIR ddPTM_A549_MK2206_60min_R1 1 EASSSSPEAGEGQIR 15 0 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial 1 EAS(0.006)S(0.032)S(0.18)S(0.782)PEAGEGQIR 50.843 0.022578 1891800.0 0.0 308.92 255.67 0.0 274.32 306.33 168.1 167.14 319.3 327.39 421.24 True False 0.0 324.64270849599654 291.9278504809777 0.0 233.96789138950672 338.7456372746031 198.6415940783557 190.8326068447825 246.9790598173248 253.43237161776995 316.6344823674362 0.0 1.025291705655947 0.9219711267650633 0.0 0.7389210727781707 1.0698317970356375 0.6273530052479992 0.6026905390024204 0.7800131494545176 0.8003941002347186 1.0 8.306674567269964 -11.980268761204728 0.06184920555167446 1.9849851058949979 1.0989937202585351e-10 0.12509645164562067 0.33285621019212824 165.56378059192508 1.5210772351480348 38.11037540160038 14.928090512845449 1.046480737683334e-12 11.980268761204728 -1.9849851057850985 EASSSS(ph)PEAGEGQIR ddPTM_A549_PD325901_60min_R1 1 EASSSSPEAGEGQIR 15 0 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial 1 EAS(0.001)S(0.021)S(0.174)S(0.804)PEAGEGQIR 117.08 8.788200000000001e-07 3224300.0 542.95 392.9 482.99 603.55 361.81 605.13 750.87 317.06 699.76 619.58 717.34 True False 598.0698843013357 426.01106188267005 515.7686058548126 640.8299127384971 336.3977137767391 600.2020219102119 779.4447687418302 310.7359895712416 670.3515206809491 580.4596130618155 629.1117275929194 0.950657662335505 0.6771628046303564 0.8198362599728105 1.0186265565107384 0.5347185547849344 0.9540467862627191 1.2389607991001992 0.4939281465315652 1.0655524150627738 0.9226653829562922 1.0 9.297172446195916 -8.369997238022666 0.6377709443253693 1.0308197888487889 0.8163337332415436 0.02219403869955061 0.21545666391059046 0.9847181683178359 0.840749342674212 0.05449099531560373 0.07028808291745635 4.2658223172279615e-09 8.369997238022666 -0.21448605560724532 EASTTAAAPGEET(ph)SPVQVPAR ddPTM_A549_MK2206_60min_R1 1 EASTTAAAPGEETSPVQVPAR 21 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 EASTTAAAPGEET(0.5)S(0.5)PVQVPAR 94.882 1.5505e-06 3210400.0 376.63 511.51 275.94 251.77 617.9 403.53 320.09 194.09 383.51 537.79 620.96 True False 440.1959362805696 537.5436741641431 315.0724412786831 313.4536613023849 527.0077285271803 446.23127675846507 378.24620968792885 221.60285187569613 296.6455973396247 416.30286548862375 466.7584943758501 0.9430914307605692 1.1516526868631434 0.6750224046806009 0.6715542728826723 1.1290801021883825 0.9560217588651835 0.8103681330828699 0.47476983182067994 0.6355440788202462 0.8919020660680302 1.0 8.866532467571469 -7.836959050616969 6.762622183734217 0.7897259470005009 0.9182667945274351 0.14021157767228432 0.190409583270279 0.491900233267604 35.89120026147499 0.034765506793226104 0.0482664267058493 1.455596321472149e-08 7.836959050616969 0.12854084752693418 EASTTAAAPGEET(ph)SPVQVPAR ddPTM_A549_PD325901_60min_R1 1 EASTTAAAPGEETSPVQVPAR 21 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 EASTTAAAPGEET(0.5)S(0.5)PVQVPAR 112.16 1.6278e-10 4020400.0 1043.1 626.41 463.58 769.19 684.87 662.42 884.7 1145.4 625.3 625.84 740.09 True False 1148.9947441103661 679.1997690860858 495.04132653300036 816.7011193427635 636.7670938732357 657.0254711446509 918.3677426264161 1122.554098451083 599.0208155393241 586.3243555934774 649.0636218170515 1.770234389186316 1.0464301899784003 0.7627007736886159 1.2582759099276144 0.9810549728401173 1.0122666701074852 1.414911746333046 1.7294977883808933 0.9228999984044203 0.9033388036015088 1.0 9.342216089233789 -3.335123481133359 0.02817145116401933 2.6497327999863016e-06 2.63216374425275 0.0631286507354063 0.312073845472053 2009.4531836437247 5.311747621956007 175.61650110040844 347.2488277242996 0.0004622495732255541 3.335123481133359 2.63216109451995 EASTTAAAPGEETS(ph)PVQVPAR ddPTM_A549_MK2206_60min_R1 1 EASTTAAAPGEETSPVQVPAR 21 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 EASTTAAAPGEET(0.39)S(0.61)PVQVPAR 99.044 3.2531999999999995e-07 2683000.0 509.75 508.3 569.52 433.71 523.8 429.72 352.76 406.12 827.36 893.09 760.27 True False 595.783337809044 534.1702988751617 650.2864998080589 539.968969469982 446.7497138736641 475.19268517494976 416.8519258005994 463.68875369033805 639.9642810224295 691.340348722057 571.4739766154463 1.0425380020584136 0.9347237507450199 1.1379109573096917 0.9448706180252464 0.7817498821548071 0.8315211271548666 0.7294329100852576 0.8113908465903101 1.1198485096602595 1.2097494846861079 1.0 9.158543993266706 -8.767138278786478 24.999171656713656 1.0565951309553683 0.9000874497523002 0.340575353234824 0.12299773551869453 146.85357516317254 644195.9893808507 0.02199336526930515 0.02372817700489127 1.7094709351536676e-09 8.767138278786478 -0.15650768120306813 EASTTAAAPGEETS(ph)PVQVPAR ddPTM_A549_PD325901_60min_R1 1 EASTTAAAPGEETSPVQVPAR 21 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 EASTTAAAPGEET(0.165)S(0.835)PVQVPAR 126.84 3.7316e-16 4316800.0 802.44 828.69 637.42 622.17 761.44 838.67 612.34 704.42 721.86 707.2 822.33 True False 883.903118074894 898.5266145878076 680.6791543178424 660.6000278494095 707.9590812253957 831.8401495801523 635.6429337853051 690.3697904932005 691.5227345357696 662.5472713084934 721.1886231793648 1.225619885929705 1.2458968232563723 0.9438295786157357 0.9159878658888848 0.981655919784693 1.1534293842753365 0.8813823642739524 0.9572666127894541 0.9588652847672321 0.9186879132780124 1.0 9.494232828069977 -5.758264364638111 24.99574324760884 0.9774992024956376 1.2357584629274756 0.6996201570707454 0.06745481704673849 30.07483614567978 236755.7490392618 0.00859496325873969 0.030703012364566268 1.7447597558223824e-06 5.758264364638111 0.258259260431838 EATAQKPTGSVGSTVTT(ph)PPPLVR ddPTM_A549_MK2206_60min_R1 2 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.011)T(0.02)VT(0.099)T(0.87)PPPLVR;EATAQKPTGSVGSTVT(0.127)T(0.873)PPPLVR 218.86 2.3001e-74 67790000.0 12248.3 13506.8 14199.1 12454.2 18101.3 13514.9 12675.9 12905.7 21748.7 19292.9 20127.9 True False 14315.51359781562 14194.238427792709 16212.745890266557 15505.479559090289 15438.622748647107 14945.037747535436 14978.946950492731 14735.122497048642 16822.654175537282 14934.620490499017 15129.5869282203 0.9461932877436172 0.9381775256082542 1.0715921040795837 1.0248448706929902 1.0204259258295003 0.9878021005093909 0.9900433515837376 0.9739276139498635 1.1119043933816202 0.9871135650532782 1.0 13.885084978819682 -8.734608899272732 24.999282721661313 1.052843766965776 0.996396871650888 0.07910466654632742 0.04687614165547811 266.76572288046304 248558.6470901359 0.008944112319370182 0.010140204263654766 1.8424304419015994e-09 8.734608899272732 -0.056446895314888 EATAQKPTGSVGSTVTT(ph)PPPLVR ddPTM_A549_PD325901_60min_R1 2 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.001)T(0.004)VT(0.133)T(0.862)PPPLVR;EATAQKPTGSVGS(0.001)T(0.004)VT(0.058)T(0.938)PPPLVR 136.16 9.593e-23 151436000.0 16461.4 19025.6 18750.0 17670.9 22263.0 20147.3 19875.6 20001.3 21915.0 20313.6 21620.0 True False 18132.549209757814 20628.954082349 20022.487752909452 18762.39135947429 20699.323683180526 19983.227068616034 20631.976834345638 19602.35838078368 20993.988761465374 19030.995829259326 18960.87706047191 0.9563138430742254 1.0879746763062221 1.055989535138683 0.9895318291255943 1.091685981464053 1.0539189197252607 1.0881340967796 1.0338318379611815 1.1072266696582265 1.0036980762315892 1.0 14.210738079098288 -6.767075210724135 24.998152141678155 1.055936100737039 1.0295281347285516 0.09396166676393258 0.04509793263032616 336.7095300974259 1493514.0411768444 0.007100431814110236 0.013671373264229682 1.7097192018313787e-07 6.767075210724135 -0.02640796600848727 EATGLS(ph)PQAAQEK ddPTM_A549_MK2206_60min_R1 2 EATGLSPQAAQEK 13 0 P17029;C9JRM9 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 EAT(0.003)GLS(0.997)PQAAQEK;EAT(0.007)GLS(0.993)PQAAQEK 214.58 1.4389999999999998e-37 46784000.0 7948.6 8298.6 7213.8 6763.6 10075.7 7973.700000000001 6935.700000000001 8325.9 10322.9 10735.2 9946.900000000001 True False 9290.129355387879 8720.963293813524 8236.825313097652 8420.682303629545 8593.57787719908 8817.471641486312 8195.826912845041 9506.121821999366 7984.7796322839395 8310.110864079803 7476.8102095258055 1.2425257690173572 1.1664015869631958 1.1016496450055067 1.1262399429239494 1.1493641855788264 1.179309276869492 1.0961662370944196 1.2714140864359673 1.0679393228560166 1.1114513584271986 1.0 12.868207196967566 -8.95844409768749 7.717005607817256 1.0296584207806803 1.161345079967096 0.39487689028146866 0.057082335675588326 0.11321310712882836 17.092399517176254 0.009158430818035775 0.009614753444729496 1.1004134812176902e-09 8.95844409768749 0.13168665918641564 EATGLS(ph)PQAAQEK ddPTM_A549_PD325901_60min_R1 2 EATGLSPQAAQEK 13 0 P17029;C9JRM9 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 EAT(0.113)GLS(0.887)PQAAQEK;EATGLS(1)PQAAQEK 187.71 2.3964000000000003e-25 65995000.0 35683.0 36062.0 35453.0 34926.0 39354.0 33950.0 36148.0 35381.0 35329.0 38900.0 41126.0 True False 39305.51189156377 39101.07129960002 37859.05377620795 37083.299697298906 36589.91080392965 33673.52245608661 37523.63192094459 34675.298199142424 33844.24498990693 36443.847361284454 36067.7627191937 1.0897685059530207 1.08410026992864 1.0496646013494206 1.0281563618462195 1.014476863696846 0.9336182761945204 1.0403648325260868 0.9613930996803896 0.9383516591645007 1.0104271685776234 1.0 15.138422315177575 -6.372101581568839 0.8821431694636536 0.9718720684090727 1.0976657789271524 0.6264817655609858 0.030824444743227774 0.34459225169829655 0.4373805470354624 0.005154256732076257 0.028783249484083 4.2452025695719357e-07 6.372101581568839 0.12579371051807975 EATGLS(ph)PQAAQEKDGIVIVK ddPTM_A549_MK2206_60min_R1 2 EATGLSPQAAQEKDGIVIVK 20 1 P17029;C9JRM9 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 EAT(0.001)GLS(0.999)PQAAQEKDGIVIVK;EAT(0.001)GLS(0.999)PQAAQEKDGIVIVK 132.26 2.0963000000000002e-17 10166700.0 4247.2 4690.9 5053.8 4978.6 6879.4 5592.9 4902.8 4593.4 7488.2 5839.2 6560.1 True False 4964.023525929518 4929.646773546125 5770.50483342107 6198.3572234978465 5867.449373086077 6184.736965733444 5793.575297128867 5244.528516697522 5792.134656198216 4520.120664499475 4931.046120450618 1.0066877098030236 0.9997162170317795 1.1702394770734244 1.2570065402128943 1.1898995121444709 1.254244396555808 1.1749180915386424 1.0635732030464675 1.1746259342771892 0.9166656636515923 1.0 12.267678031201022 -10.817500955949466 0.8288971068761757 0.9899267630424814 1.1488303443814254 0.3798872761830082 0.08733167818868194 0.8074966436388508 0.8776154832088676 0.08565753013705915 0.016487883603846985 1.5222957820677746e-11 10.817500955949466 0.158903581338944 EATGLS(ph)PQAAQEKDGIVIVK ddPTM_A549_PD325901_60min_R1 3 EATGLSPQAAQEKDGIVIVK 20 1 P17029;C9JRM9 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 EAT(0.248)GLS(0.752)PQAAQEKDGIVIVK;EAT(0.007)GLS(0.993)PQAAQEKDGIVIVK;EAT(0.014)GLS(0.986)PQAAQEKDGIVIVK 107.17 2.6475e-10 11830700.0 7704.1 8019.2 8371.2 8572.5 8933.5 9195.6 8561.0 9115.8 8345.8 9416.7 9537.5 True False 8486.214560541335 8695.00612738485 8939.31997211496 9102.00385543993 8306.041778901912 9120.714082391469 8886.793539758954 8933.978217793245 7995.055049301289 8822.127954935924 8364.447963193841 1.0145576370231848 1.0395194238335352 1.068728027414449 1.088177473933912 0.9930173294700458 1.090414349222499 1.0624483024897273 1.0680894013694044 0.9558377414124644 1.0547172979921708 1.0 13.03005461308553 -8.757177963182917 24.99999938968069 0.9791455987985778 1.0539053623258292 0.19113584944197037 0.037115501659868703 57.57435297760095 337764.4970543112 0.005190841255457776 0.005785409529220038 1.7491297914401684e-09 8.757177963182917 0.07475976352725144 EATNTTSEPSAPSQDLLDLS(ph)PSPR ddPTM_A549_MK2206_60min_R1 2 EATNTTSEPSAPSQDLLDLSPSPR 24 0 I3NI44;J3KQU4;I3L4I4;O75674-2;O75674-3;O75674 I3NI44 TOM1L1 TOM1-like protein 1 1 EATNTTSEPSAPS(0.001)QDLLDLS(0.759)PS(0.24)PR;EATNTTSEPS(0.008)APS(0.046)QDLLDLS(0.684)PS(0.262)PR 84.285 2.2088999999999997e-06 4094200.0 1054.25 1270.0 1251.42 1123.32 2125.03 1337.58 1269.26 1399.01 1989.71 1312.79 1816.05 True False 1232.181626062157 1334.637575391414 1428.8901734615122 1398.5334504277519 1812.4409020102203 1479.1218277862547 1499.8681124324428 1597.3239517884363 1539.0438619139659 1016.229827227748 1365.0746645697998 0.9026477877314324 0.9777029858011628 1.0467487314416049 1.0245105903188794 1.3277229070700005 1.0835464653886875 1.0987443774037977 1.1701366916012828 1.1274429903795717 0.7444499950103539 1.0 10.4147641480846 -5.652068747490367 1.6194297491313774 1.0901628516138242 0.8957920320369634 0.12567146808210095 0.1335308884386726 0.5235845317105206 2.1223912016328272 0.013334820865138607 0.1262945979930775 2.2280824227092053e-06 5.652068747490367 -0.19437081957686075 EATNTTSEPSAPSQDLLDLSPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EATNTTSEPSAPSQDLLDLSPSPR 24 0 I3NI44;J3KQU4;I3L4I4;O75674-2;O75674-3;O75674 I3NI44 TOM1L1 TOM1-like protein 1 1 EATNTTSEPSAPSQDLLDLS(0.123)PS(0.876)PR;EATNTTSEPSAPSQDLLDLS(0.055)PS(0.945)PR 124.06 8.089e-17 39405000.0 1316.98 1224.73 968.77 1277.4499999999998 1857.18 1436.13 1357.15 1285.84 2107.6000000000004 1648.08 1643.95 True False 1539.2540269303686 1287.0635257552176 1106.1561532853154 1590.42530734691 1583.9912821914695 1588.1003233740591 1603.7265877658563 1468.1117577198463 1630.2319651456103 1275.7775833587289 1235.711844288164 1.2456415579775082 1.041556356123328 0.895157037134754 1.28705192452297 1.281845188676599 1.2851704308854381 1.2978159877472797 1.188069665679669 1.3192654684674572 1.0324232055035816 1.0 10.271126644988774 -4.9219915741366 19.176249419894315 1.1681679600514514 3.6730611804261617 0.026558388745059225 0.14079423967396304 1015.0613913935616 263839.524246969 0.0214546084182644 6240.943140647959 1.1967637498156061e-05 4.9219915741366 2.5048932203747105 EATNTTSEPSAPSQDLLDLSPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EATNTTSEPSAPSQDLLDLSPSPR 24 0 I3NI44;J3KQU4;I3L4I4;O75674-2;O75674-3;O75674 I3NI44 TOM1L1 TOM1-like protein 1 1 EATNTTSEPSAPSQDLLDLS(0.076)PS(0.924)PR;EATNTTSEPSAPSQDLLDLS(0.032)PS(0.968)PR 126.59 1.3872000000000001e-17 62431000.0 2110.32 2491.93 1998.69 2760.3 2566.8 2827.1 2892.1000000000004 2951.2 2501.62 3352.1 3176.3999999999996 True False 2324.558132864526 2701.9336865290966 2134.333122499338 2930.7974619038596 2386.516822979281 2804.077034922018 3002.1604481178447 2892.336000828387 2396.4856110178866 3140.4478339270345 2785.7229368586 0.8344541742137072 0.9699219009827336 0.7661684851208426 1.0520778729017672 0.8566956862086598 1.0065886301256202 1.0776952755765858 1.0382712374440268 0.8602742143913106 1.1273367470881546 1.0 11.443836061805467 -6.263926180777231 24.9997934202598 0.9563959413006494 0.8681555628104014 0.21543753947837907 0.09783407862100957 309.3743709786347 3110160.2057736022 0.012555982961087462 0.030485310110012123 5.445952125698649e-07 6.263926180777231 -0.08824037849024802 EATQPEPIY(ph)AESTK ddPTM_A549_MK2206_60min_R1 2 EATQPEPIYAESTK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(0.801)AES(0.18)T(0.02)K;EATQPEPIY(0.988)AES(0.011)T(0.001)K 199.8 2.3536e-31 67334000.0 9124.7 10670.2 9369.2 8795.4 11251.900000000001 9972.2 10005.6 9599.5 13824.1 13712.4 13906.6 True False 10664.726282503556 11213.267603890907 10697.893443604546 10950.273394840515 9596.760415301804 11027.451584989378 11823.488005415802 10960.258522235792 10692.963422551451 10614.759316324595 10453.20741736536 1.0202348290522592 1.0727107151115072 1.0234077462035913 1.047551527261327 0.918068496312358 1.0549347338760404 1.1310870944523752 1.0485067486586075 1.0229361186106187 1.0154547683317616 1.0 13.35165806014653 -9.358729349103402 1.6800161631794812 1.0068017409711936 1.039164962724779 0.05772498150017358 0.04817022209729152 0.6776778697368909 3.929391150936468 0.01092421627596432 0.00938773516070303 4.377948524778653e-10 9.358729349103402 0.032363221753585414 EATQPEPIY(ph)AESTK ddPTM_A549_PD325901_60min_R1 2 EATQPEPIYAESTK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(0.993)AES(0.006)T(0.001)K;EATQPEPIY(1)AESTK 179.93 1.4782000000000002e-23 90875000.0 12675.8 11507.9 13802.7 13976.8 14794.2 13961.4 13045.599999999999 14648.900000000001 14737.2 14495.599999999999 15992.9 True False 13962.637884569232 12477.711119978558 14739.434224377768 14840.115192384104 13755.106429219293 13847.702987287423 13542.057446826237 14356.716197660266 14117.84673399349 13580.345342165425 14025.87468734603 0.9954914182404717 0.8896208898284108 1.0508745124947896 1.0580527434608176 0.9806950893143926 0.9872969277117989 0.9655053783593057 1.0235879414075129 1.0065573127307659 0.9682351828237453 1.0 13.775803123128462 -5.7656428178536965 24.999999985187305 1.005520123062428 0.9425561587108378 0.2989625909297222 0.0365795547975554 77.0462945748643 458247.3514960187 0.004481330969329469 0.014678890224509286 1.7153675183027726e-06 5.7656428178536965 -0.06296396435159024 EATQPEPIY(ph)AESTKR ddPTM_A549_MK2206_60min_R1 2 EATQPEPIYAESTKR 15 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(1)AESTKR;EATQPEPIY(0.982)AES(0.009)T(0.009)KR 165.89 1.0220999999999999e-20 253920000.0 12041.1 14093.0 14266.1 10644.6 16543.9 12759.2 12169.5 11915.1 20155.3 17945.1 19039.9 True False 14073.343303369269 14810.273503930064 16289.247497737992 13252.52747785425 14110.314225571808 14109.370075128501 14380.540625440508 13604.10191346337 15590.15673140033 13891.28944658677 14311.7673554927 0.9833406981680759 1.034831906923504 1.1381716243093034 0.9259881850139265 0.9859239516045112 0.9858579813843521 1.0048053652801596 0.9505535952023608 1.0893243541593063 0.9706201268884828 1.0 13.804914220556316 -8.766655925609777 24.99978326876462 1.0421809393272192 1.0034666325402237 0.0 0.05883664753060002 259.22126505145116 1242288.3134837893 0.010281587460220057 0.011103748013414525 1.7113706295947445e-09 8.766655925609777 -0.0387143067869955 EATQPEPIY(ph)AESTKR ddPTM_A549_PD325901_60min_R1 2 EATQPEPIYAESTKR 15 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 EATQPEPIY(0.936)AES(0.032)T(0.032)KR;EATQPEPIY(0.847)AES(0.076)T(0.076)KR 105.39 2.0319999999999998e-06 343590000.0 23899.8 26517.7 26618.5 25930.1 29436.0 31169.0 28959.0 30058.0 28614.0 32636.0 33060.0 True False 26326.09010189715 28752.439642876234 28424.991480043725 27531.743385470156 27368.516908687157 30915.169998048998 30061.05059197285 29458.469609955155 27411.453087865386 30575.357390305377 28993.829584606887 0.9079894059898156 0.9916744374513807 0.980380718493801 0.949572504905907 0.9439428078592755 1.0662672175759138 1.0368085562568305 1.0160254796280843 0.9454236808516803 1.0545470477117704 1.0 14.82345828065595 -5.2576650890298655 23.91298247451795 0.9838224804488651 0.9079893508244131 0.2076358966125833 0.04287061404644794 239.4726103756061 1517115.8259114055 0.005601659562340835 0.056812033826458976 5.525033440744254e-06 5.2576650890298655 -0.07583312962445199 EATSDPS(ph)RTPEEEPLNLEGLVAHR ddPTM_A549_MK2206_60min_R1 1 EATSDPSRTPEEEPLNLEGLVAHR 24 1 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0 A0A494C067 TNS1 Tensin-1 1 EAT(0.038)S(0.065)DPS(0.449)RT(0.449)PEEEPLNLEGLVAHR 118.43 3.1583e-16 23000000.0 148.22 206.58 205.71 0.0 215.09 171.08 219.83 152.8 252.91 235.93 0.0 True False 173.23591236891917 217.09403962547887 234.88277123808783 0.0 183.45054592800008 189.1835720462869 259.77026547438993 174.45986793037437 195.62628881428 182.63324913949873 0.0 0.0 EATSDPS(ph)RTPEEEPLNLEGLVAHR ddPTM_A549_PD325901_60min_R1 1 EATSDPSRTPEEEPLNLEGLVAHR 24 1 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0 A0A494C067 TNS1 Tensin-1 1 EAT(0.006)S(0.016)DPS(0.489)RT(0.489)PEEEPLNLEGLVAHR 128.89 7.3796e-23 29704000.0 614.14 532.79 452.09 178.72 698.07 562.59 483.82 715.09 636.47 800.64 691.23 True False 676.4870406940278 577.6900831266676 482.77154603801756 189.7591284974306 649.0399714107632 558.0084535661202 502.23203485646235 700.826968972747 609.7213792840455 750.0874537619229 606.2130920679924 1.1159228488225283 0.952948873400237 0.7963726820731055 0.31302380463295465 1.070646576101935 0.9204823532638824 0.8284744117669639 1.15607362846948 1.005787217831415 1.2373329833625462 1.0 9.243681199365806 -7.7096412206156435 1.4124198280072333 1.010853289490839 0.8279156639754036 0.167708633475121 0.21614502848208253 0.6228663591630642 2.524581249195533 0.03428648788792422 0.055827442789012006 1.9514560710425987e-08 7.7096412206156435 -0.18293762551543546 EATSDPSRT(ph)PEEEPLNLEGLVAHR ddPTM_A549_MK2206_60min_R1 3 EATSDPSRTPEEEPLNLEGLVAHR 24 1 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0 A0A494C067 TNS1 Tensin-1 1 EAT(0.004)S(0.004)DPS(0.155)RT(0.836)PEEEPLNLEGLVAHR;EAT(0.015)S(0.014)DPS(0.357)RT(0.615)PEEEPLNLEGLVAHR;EAT(0.034)S(0.031)DPS(0.146)RT(0.789)PEEEPLNLEGLVAHR 103.86 5.6814e-11 26887400.0 1276.02 1632.19 1846.63 1477.29 1947.88 1564.8600000000001 1610.7799999999997 1338.77 2435.46 2415.46 2785.12 True False 1491.3809803062218 1715.261499352843 2108.5099015672054 1839.226116318069 1661.3494323410328 1730.4524465300003 1903.43787572596 1528.5447473111738 1883.8321986304463 1869.8059083901742 2093.4978385984086 0.7123871602870617 0.8193280488415532 1.0071708041403316 0.8785421615478839 0.793575900442917 0.8265843005066266 0.9092141585397131 0.7301391571220969 0.8998491251806914 0.8931491945757175 1.0 11.031699713251424 -9.695828081127532 0.9359409037040979 0.9848431788352296 0.8426949084357459 0.1661346884981293 0.08375576490770767 0.3971914677338768 0.7252673341405559 0.025993943298158833 0.016243861586696356 2.01452155617966e-10 9.695828081127532 -0.14214827039948374 EATSDPSRT(ph)PEEEPLNLEGLVAHR ddPTM_A549_PD325901_60min_R1 1 EATSDPSRTPEEEPLNLEGLVAHR 24 1 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0 A0A494C067 TNS1 Tensin-1 1 EAT(0.003)S(0.016)DPS(0.092)RT(0.89)PEEEPLNLEGLVAHR 186.71 1.3283000000000001e-50 32585000.0 571.73 786.32 725.85 405.89 674.97 747.18 471.22 683.54 656.69 892.62 753.64 True False 629.7716087146193 852.5859459902804 775.1105458906308 430.9609034569274 627.5624357200894 741.0952138067398 489.1525349614779 669.9062584732435 629.09160300099 836.2598208645175 660.947057717578 0.9528321540448103 1.2899458981396805 1.1727271297148807 0.6520354367642507 0.9494897184159131 1.1212625960783218 0.7400782396258011 1.0135550959052666 0.9518033186703437 1.265244789427371 1.0 9.368390905339389 EATTDFTVDSRPLTQVGGDHIK ddPTM_A549_MK2206_60min_R1 2 EATTDFTVDSRPLTQVGGDHIK 22 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 120.52 1.3202000000000001e-14 6975600.0 1640.9 2398.8 2319.37 1910.16 3251.9 2099.75 2293.54 2068.3599999999997 3560.7 3373.3 2855.1 False True 1917.8438038467107 2520.8886738967894 2648.2915421053112 2378.14928575034 2773.549817765883 2321.9441512987555 2710.24652993737 2361.556364086841 2754.2071352694916 2611.269187141402 2146.0998732486614 0.8936414505926847 1.1746371663872246 1.234002002943347 1.1081261013963966 1.2923675418550853 1.0819366704420468 1.2628706444284583 1.1003944380799164 1.2833545957487555 1.2167510094432792 1.0 11.067501501151593 -2.706698724080782 17.95005901511167 1.1440977255170768 0.2873356584965696 0.0 0.12073177965856016 0.0 0.0 0.016852070860364384 0.0 0.001964722758779951 2.706698724080782 -0.8567620670205072 EATTEFSVDAR ddPTM_A549_MK2206_60min_R1 1 EATTEFSVDAR 11 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 138.66 1.838e-17 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAVAPVQEES(ph)DLEK ddPTM_A549_MK2206_60min_R1 2 EAVAPVQEESDLEK 14 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ESD3;E7EMU4;E7ERH4;E7ET01;E7ERR6;E7EUM4;Q13409-7;Q13409-5;Q13409;E7EU01 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAVAPVQEES(1)DLEK;EAVAPVQEES(1)DLEK 116.96 3.4530000000000002e-06 3603400.0 3067.6 3413.9 2915.0 2425.9 4269.3 3777.7 2701.2 3374.2 4757.0 4387.9 5022.3 True False 3585.335884380625 3587.6529280541317 3328.390832526497 3020.2456089027887 3641.2916255075106 4177.4537065656905 3191.973075100861 3852.503183054119 3679.5470953680374 3396.670342471098 3775.124301571491 0.9497265779799988 0.9503403441737482 0.8816639047198976 0.8000387186312078 0.9645488028014683 1.10657381660962 0.8455279403044084 1.0204970420312829 0.9746823684285927 0.8997505965716541 1.0 11.882308432757656 -6.981311439915325 24.815744793441848 0.9879845378544295 0.8963687500892148 0.1960760126015153 0.07309807097866448 210.73332759846988 279822.2107666968 0.0092312821690095 0.01744353338036423 1.043971301252111e-07 6.981311439915325 -0.09161578776521473 EAVAPVQEES(ph)DLEK ddPTM_A549_PD325901_60min_R1 1 EAVAPVQEESDLEK 14 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ESD3;E7EMU4;E7ERH4;E7ET01;E7ERR6;E7EUM4;Q13409-7;Q13409-5;Q13409;E7EU01 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAVAPVQEES(1)DLEK 148.7 2.6982e-13 2670500.0 2777.7 3043.6 2596.5 2849.2 3124.0 3537.6 2785.7 2934.8 3040.4 3042.9 3454.1 True False 3059.6900591653366 3300.0948535151283 2772.714104022899 3025.188612997311 2904.5810172149286 3508.79095848754 2891.7113378935296 2876.2631116939383 2912.6225612758067 2850.7707746954384 3029.267597343939 1.0100428439693052 1.0894035430903002 0.9153084086906069 0.9986534750676352 0.9588393642614025 1.1582967980656602 0.9545909184216611 0.9494912612592711 0.9614939808650755 0.9410759145857545 1.0 11.56475331222051 EAVIT(ph)PVASATQSVSR ddPTM_A549_MK2206_60min_R1 2 EAVITPVASATQSVSR 16 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EAVIT(0.992)PVAS(0.008)ATQSVSR;EAVIT(1)PVASATQSVSR 275.66 9.674399999999997e-107 91479000.0 17401.5 21145.0 20174.3 18783.5 27789.0 20644.5 20330.6 19875.4 31308.0 31028.0 31571.0 True False 20338.44777417182 22221.19018240269 23035.319098675587 23385.458343223356 23701.27491186571 22829.087287289974 24024.406856451023 22692.798815859704 24216.787988602566 24018.753250118105 23731.0493847268 0.8570395452997353 0.9363762142227116 0.9706827003402984 0.9854371782764118 0.9987453368631791 0.9619923214176392 1.0123617572475756 0.9562492769689608 1.0204684839680283 1.012123520571175 1.0 14.534488277328157 -3.688590761288112 0.5963779876370873 1.0038095735602977 1.1972034113869886e-18 0.8118411782266692 0.01942907782679666 5.210673208033769 0.2918440640121736 0.00334420646434798 5.493371937284517 0.0002048373924591867 3.688590761288112 -1.0038095735602977 EAVIT(ph)PVASATQSVSR ddPTM_A549_PD325901_60min_R1 2 EAVITPVASATQSVSR 16 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EAVIT(0.999)PVAS(0.001)ATQSVSR;EAVIT(1)PVASATQSVSR 303.41 3.6759999999999987e-143 141770000.0 26731.0 29078.0 28186.0 30133.0 35422.0 31075.0 31114.0 33944.0 32226.0 33668.0 34919.0 True False 29444.711441677857 31528.50510924989 30098.871456186964 31994.24697299171 32934.08091926606 30821.93550288341 32298.060296234093 33266.960291447125 30871.65328893374 31542.19673418316 30624.18436977882 0.9614855725181398 1.0295296269298682 0.9828464684234902 1.0447379295614783 1.075427202292014 1.0064573518339883 1.0546586288223605 1.0862970223062105 1.0080808329837228 1.029976712304223 1.0 14.902383800110533 -5.254919547571957 23.788529290310027 1.0193084733321043 0.9614855214174131 0.19988621944697071 0.03267589902748649 507.42898973870376 1851322.417731045 0.004800009667150367 0.06142934746817466 5.560072472734792e-06 5.254919547571957 -0.05782295191469122 EAVLLLK ddPTM_A549_MK2206_60min_R1 2 EAVLLLK 7 0 P36578;H3BM89;H3BTP7 P36578 RPL4 60S ribosomal protein L4 0 ; 110.35 0.023322 5490900.0 1997.85 2715.5 2039.9 2061.9 2460.2 1897.69 2299.98 1710.52 2643.52 2808.8999999999996 2297.09 False True 2335.0382372570857 2853.7073511617195 2329.188493746417 2567.065592562209 2098.307839007234 2098.502296215327 2717.85659457666 1952.9914482478007 2044.7669408339948 2174.367539134225 1726.6591565411964 1.3523446294603854 1.652733453705015 1.3489567323826628 1.486723991146287 1.2152414858822027 1.2153541063767317 1.5740550671396012 1.1310810479585258 1.184233108826194 1.2592916968568757 1.0 10.753767606846388 -8.381295495876822 0.2032279786994314 0.8933384703630431 1.6106688845871164 0.3142264663883373 0.1551596275137318 1.277623386473016 0.21621342852234401 0.2811998685739506 0.3387625004365233 4.15627719335323e-09 8.381295495876822 0.7173304142240733 EAVLLLK ddPTM_A549_PD325901_60min_R1 2 EAVLLLK 7 0 P36578;H3BM89;H3BTP7 P36578 RPL4 60S ribosomal protein L4 0 ; 126.54 0.016249 10754200.0 4211.2 4339.1 4519.5 4453.2 5064.8 5353.799999999999 5200.4 5030.200000000001 5178.1 4889.8 4825.700000000001 False True 4638.717923878414 4704.771185072772 4826.220447961296 4728.2640500490015 4709.0659206114515 5310.200427846735 5398.304067768074 4929.868714884441 4960.4824643278025 4581.057193501513 4232.169492632711 1.0960614720070676 1.1116688954123313 1.140365587050022 1.1172199171795656 1.1126836788575962 1.2547230060352361 1.2755406127201072 1.1648561626528127 1.172089745687862 1.0824370813777993 1.0 12.04718169124544 -10.602444190184563 0.8887130240644665 1.000154003125073 1.1618055709269326 0.3465296961767391 0.059741408282572905 0.39824735918524823 0.5620899715717795 0.04103339438176433 0.01125935068828153 2.497789351569971e-11 10.602444190184563 0.16165156780185952 EAVREGS(ph)PANWK ddPTM_A549_MK2206_60min_R1 1 EAVREGSPANWK 12 1 O96019-2;O96019 O96019-2 ACTL6A Actin-like protein 6A 1 EAVREGS(1)PANWK 45.723 0.012790000000000001 14340000.0 3985.2 4271.9 3278.8 3461.7 6088.6 4135.0 3484.9 4033.4 6212.6 6401.9 6964.7 True False 4657.804331214524 4489.321463239826 3743.7831429461016 4309.816655401619 5192.975005519646 4572.562955409146 4118.061220723746 4605.146801769451 4805.456019483596 4955.7063436873495 5235.17277405869 0.8897135839135738 0.8575307171303488 0.7151212203534681 0.8232424871930889 0.9919395652521457 0.8734311459723151 0.7866141956440384 0.8796551709981488 0.9179173690877166 0.9466175344286339 1.0 12.354021435221133 -9.495079632128858 0.41539763954625514 1.0104830102638769 0.8357071878584647 0.3206279536702027 0.06695035617012338 0.7981964770286767 0.3190715348190835 0.054943620474247425 0.026761566926487793 3.1983086148461666e-10 9.495079632128858 -0.17477582240541223 EAVTEILGIEPDREK ddPTM_A549_MK2206_60min_R1 1 EAVTEILGIEPDREK 15 1 H7C1D4;E9PGT1;Q15631 H7C1D4 TSN Translin 0 49.31 0.025691000000000002 992130.0 344.67 283.99 432.19 310.45 506.46 388.92 186.93 396.52 646.85 450.86 567.0 False True 402.8418696275492 298.4438779806357 493.4810407923249 386.51026393663005 431.96040490350487 430.075256255798 220.89276133888782 452.7279242915709 500.33950780719243 349.01041286413096 426.198251596088 0.9451983158516711 0.7002466032250965 1.1578673515066444 0.9068790462869598 1.0135198895956 1.009096716481569 0.5182864089931319 1.0622472583970741 1.1739595503581952 0.8188921741398679 1.0 8.735380864502973 -8.48770825777726 24.999960036947005 1.0840400709801539 0.8971938017921315 0.04640754141062986 0.18196243936055626 684.0938726234651 486269.96052683244 0.0267060065740128 0.032278238777436255 3.2530575181508895e-09 8.48770825777726 -0.18684626918802238 EAVTEILGIEPDREK ddPTM_A549_PD325901_60min_R1 1 EAVTEILGIEPDREK 15 1 H7C1D4;E9PGT1;Q15631 H7C1D4 TSN Translin 0 82.65100000000001 0.00027401 1442000.0 745.71 970.23 587.64 583.67 974.77 897.55 776.93 996.63 650.41 1070.4 1009.1 False True 821.4139302373126 1051.9946871224809 627.5207841663841 619.7219702892527 906.305517973942 890.2406503817543 806.4964963024094 976.7514328088897 623.075529561702 1002.8147613243935 884.9870972119429 0.9281648657083128 1.1887118924520792 0.7090733708359378 0.7002610232868032 1.0240889622336422 1.0059363048188636 0.9113087624025143 1.1036900265394156 0.7040504110451268 1.1331405446290168 1.0 9.789512611157884 -8.763883067154369 24.999995004420633 0.8602460455660169 0.9417695193460431 0.0 0.17322585289961315 177.65032262361248 1817438.7928599676 0.029671100033622267 0.03231408877327016 1.7223322467771096e-09 8.763883067154369 0.08152347378002622 EAVTTLK ddPTM_A549_PD325901_60min_R1 1 EAVTTLK 7 0 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial 0 85.212 0.011290000000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EAVVDLHADDS(ph)RISEDETERNGDDGTHDK ddPTM_A549_MK2206_60min_R1 1 EAVVDLHADDSRISEDETERNGDDGTHDK 29 2 Q9UKV3-5 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.543)RIS(0.4)EDET(0.057)ERNGDDGTHDK 139.67 1.5946e-28 104380000.0 1513.3 1199.0 1278.1 1419.4 1663.6 1473.5 1357.8 1261.7 2593.1 2185.2 2376.9 True False 1768.7080433671936 1260.0239786569323 1459.3537986456658 1767.153063719288 1418.8866437575941 1629.4247919698616 1604.4946843521207 1440.5498387941982 2005.7669903297992 1691.5618023126883 1786.650130897252 0.9899576938876958 0.7052438285855949 0.8168100588965235 0.9890873614028883 0.794160322281471 0.9119999286886503 0.8980463811044789 0.8062853570949322 1.1226411683201272 0.9467784279976458 1.0 10.803041432282788 -8.75978419363617 24.99999704019882 1.0579138888874158 0.8616706825904976 0.3630933264580809 0.09072966437190919 25.08949298582754 378952.30691519676 0.01464819179705535 0.016188681887532603 1.7386645783182792e-09 8.75978419363617 -0.19624320629691816 EAVVDLHADDS(ph)RISEDETERNGDDGTHDK ddPTM_A549_PD325901_60min_R1 1 EAVVDLHADDSRISEDETERNGDDGTHDK 29 2 Q9UKV3-5 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.701)RIS(0.29)EDET(0.009)ERNGDDGTHDK 173.05 1.9234999999999999e-57 155190000.0 2758.9 3068.7 2913.5 3174.6 3793.1 3895.0 3026.6 3865.7 3749.5 4032.1 4024.2 True False 3038.9814970051666 3327.310118603585 3111.2276302987566 3370.6878319602897 3526.685741484617 3863.280411383132 3141.77891921907 3788.595580917014 3591.9215542374814 3777.5125178775093 3529.248911505599 0.8610844894214952 0.9427813685105407 0.8815551717409152 0.9550722877526747 0.9992737349829235 1.0946466254586258 0.8902117696988303 1.073484947056561 1.0177580681621987 1.0703446009610014 1.0 11.785145469024835 -6.557311326964544 2.7796020525644147 1.0106742105713806 0.9001332973304571 0.4991289097570135 0.05487801527663501 0.16381805260081733 2.5567119142776003 0.006748845773931399 0.016056130611801427 2.7713327436114564e-07 6.557311326964544 -0.11054091324092352 EAVVDLHADDSRIS(ph)EDETER ddPTM_A549_MK2206_60min_R1 4 EAVVDLHADDSRISEDETER 20 1 Q9UKV3-5 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.007)RIS(0.984)EDET(0.009)ER;EAVVDLHADDS(0.022)RIS(0.978)EDETER;EAVVDLHADDS(0.001)RIS(0.999)EDETER;EAVVDLHADDS(0.019)RIS(0.975)EDET(0.006)ER 207.55 5.7871e-57 180558000.0 2146.94 2148.57 2309.4 1896.12 3039.48 2907.62 2458.5 3531.04 3406.96 3877.17 3827.5800000000004 True False 2509.2909843565462 2257.9230357155357 2636.907646187544 2360.6694851200614 2592.3765183748087 3215.3024184780493 2905.1776266605434 4031.5757333564748 2635.2889997971592 3001.3146041884906 2877.086250166061 0.8721639763881649 0.7847950458854724 0.9165201933154926 0.8205070268518392 0.9010423369216619 1.117555102247097 1.0097638284194161 1.4012703766262755 0.9159575941267157 1.0431785296722542 1.0 11.490392755937998 -7.039378743282713 8.302807479432497 1.0101399049092372 0.8501706123862659 0.365977906895698 0.12955507499648428 0.36686875174481415 72.44537143272731 0.020260528815505895 0.03547336218425487 9.133164012077448e-08 7.039378743282713 -0.15996929252297132 EAVVDLHADDSRIS(ph)EDETER ddPTM_A549_PD325901_60min_R1 4 EAVVDLHADDSRISEDETER 20 1 Q9UKV3-5 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.001)RIS(0.999)EDETER;EAVVDLHADDS(0.044)RIS(0.955)EDET(0.001)ER;EAVVDLHADDS(0.006)RIS(0.994)EDETER;EAVVDLHADDS(0.005)RIS(0.994)EDET(0.001)ER 204.31 9.0099e-56 281911000.0 4119.73 3820.5 4359.6 4431.17 4621.279999999999 4278.9800000000005 4433.24 4507.21 4439.49 4380.75 5469.62 True False 4537.961956815066 4142.466943045915 4655.468672404484 4704.873306982764 4296.697235350514 4244.133405571299 4601.949374162012 4417.31016071216 4252.91367404234 4104.148697376528 4796.891414777905 0.9460214052031387 0.8635732154128218 0.970517835376107 0.9808171376338313 0.8957253487359689 0.8847674542926466 0.9593607560064148 0.9208693253100624 0.8865978623031326 0.8555850742697182 1.0 12.227884066887649 -10.958768567424416 1.2110067361368175 1.00019172797617 0.9200780687002973 0.0 0.05589355387608704 0.39774259029287373 1.0329963784274758 0.02648202627668809 0.00608978047476627 1.099591648242449e-11 10.958768567424416 -0.08011365927587277 EAVVDLHADDSRIS(ph)EDETERNGDDGTHDK ddPTM_A549_MK2206_60min_R1 3 EAVVDLHADDSRISEDETERNGDDGTHDK 29 2 Q9UKV3-5 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.063)RIS(0.937)EDETERNGDDGTHDK;EAVVDLHADDS(0.042)RIS(0.958)EDETERNGDDGTHDK;EAVVDLHADDS(0.421)RIS(0.463)EDET(0.116)ERNGDDGTHDK 261.81 1.4381999999999996e-152 427466000.0 5795.2 7633.900000000001 6985.19 6554.3 8106.7 6348.1 6049.5 6834.900000000001 10550.4 12046.699999999999 12074.9 True False 6773.288080963168 8022.4329029767805 7975.794977514841 8160.103794233708 6914.215168880551 7019.851728472257 7148.615844003645 7803.768006003376 8160.7512455267815 9325.342103203491 9076.369079713591 0.7462552504725714 0.8838813001674378 0.8787429100190933 0.8990493580161025 0.7617820637477571 0.7734207001522432 0.7876074431549254 0.8597896292522326 0.8991206917496019 1.0274309056081 1.0 13.147899560336752 -9.422736812208159 0.7960974540754595 0.9836138228281621 0.8234780403878141 0.6472007031180327 0.05271261369816444 0.27265484233877385 0.37206843005748763 0.01778620392984815 0.012286529845665382 3.7780107365789507e-10 9.422736812208159 -0.16013578244034798 EAVVDLHADDSRIS(ph)EDETERNGDDGTHDK ddPTM_A549_PD325901_60min_R1 3 EAVVDLHADDSRISEDETERNGDDGTHDK 29 2 Q9UKV3-5 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.01)RIS(0.99)EDETERNGDDGTHDK;EAVVDLHADDS(0.273)RIS(0.714)EDET(0.013)ERNGDDGTHDK;EAVVDLHADDS(0.004)RIS(0.992)EDET(0.004)ERNGDDGTHDK 271.89 3.379399999999999e-153 632130000.0 19618.699999999997 19206.4 19260.699999999997 18188.6 22011.9 22881.1 19837.2 20277.1 25049.4 22995.0 25117.2 True False 21610.375981476387 20824.990732866674 20567.846925998034 19312.06851269229 20465.860080932558 22694.76390780451 20592.11550133236 19872.657333422783 23996.66082963499 21543.091775648736 22027.943631049253 0.9810437298838786 0.9453896869207996 0.9337161593698127 0.8767077325125878 0.9290862744030779 1.0302715626989052 0.9348178770671522 0.9021567181337568 1.0893736261341596 0.9779892366023173 1.0 14.427047201335473 -8.758782583174323 24.999999215954023 1.0422042130479714 0.9416519490999833 0.35658651468859504 0.046313214526241125 44.29837897612422 416839.8228030215 0.008368168535556527 0.009277653212878694 1.7426790763438194e-09 8.758782583174323 -0.10055226394798811 EAWPHIK ddPTM_A549_PD325901_60min_R1 2 EAWPHIK 7 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 69.344 0.023740999999999998 20674600.0 6867.599999999999 6093.5 6978.9 6354.0 8319.0 5671.2 6018.0 6360.799999999999 7540.8 8126.9 8511.4 False True 7564.793696340085 6607.020630140106 7452.530121534915 6746.472149018991 7734.702138991991 5625.015627480366 6247.018283175962 6233.928854048935 7223.886399838377 7613.76614705457 7464.551758210012 1.0134290633084324 0.8851195415549585 0.9983895032060198 0.9038013758292681 1.0361911055790924 0.7535637516738495 0.8368912810210036 0.8351377357913614 0.9677589001768344 1.0199897319595168 1.0 12.865839914663779 -8.959871958930725 13.127617691746714 0.9857886705914154 0.9063781247502406 0.19071733551850722 0.08082728227374684 1.6010066531584637 522.3452915712753 0.013959160497804652 0.014766141254275052 1.0968015134876467e-09 8.959871958930725 -0.0794105458411748 EAYPGDVFYLHSR ddPTM_A549_MK2206_60min_R1 1 EAYPGDVFYLHSR 13 0 P25705-2;P25705;P25705-3 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 92.45700000000001 0.00019203 3482400.0 586.66 860.01 926.93 915.51 1133.4 716.62 1128.4 841.29 1583.4 1393.4 1499.9 False True 685.6738655400759 903.7808356002905 1058.3826121419504 1139.809991098805 966.6783614059011 792.4522527461435 1333.4156737538171 960.54543384257 1224.7624281702217 1078.6299722416716 1127.4334348659133 0.6081723712776211 0.8016267813698269 0.9387539693355154 1.0109776381027442 0.8574150202675771 0.702881632067609 1.1827001333452574 0.8519752955142833 1.0863279288110554 0.9567127769010629 1.0 10.138826542068465 -4.156986718430055 0.35827335852574294 1.0321693856846699 5.576201946012881e-14 0.3603775313115193 0.12728402763998994 8.5747565328331 0.4116995234996062 0.03300994824929366 4.526021547125894 6.966478186302512e-05 4.156986718430055 -1.0321693856846141 EAYPT(ph)PTK ddPTM_A549_MK2206_60min_R1 2 EAYPTPTK 8 0 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VVE7;F8VZ43;F8VZB8;F8VVD3 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 EAY(0.008)PT(0.853)PT(0.139)K;EAYPT(0.909)PT(0.091)K 98.04 0.0025906999999999996 18279700.0 13646.1 15881.6 14551.0 14854.3 18598.5 15627.7 16263.9 16055.8 20666.0 21646.9 19211.9 True False 15949.228064886702 16689.90560420179 16614.55060174719 18493.60416683486 15862.685287283972 17281.412841172318 19218.840106668456 18331.758818825285 15985.183996820644 16756.850255575027 14441.055008534187 1.1044364871860979 1.1557261982825082 1.1505080890508719 1.2806269456009791 1.0984436578843892 1.1966863107272683 1.3308473719759917 1.269419637830603 1.1069263282616075 1.1603619157791645 1.0 13.817888523435283 -9.307526015834723 1.5362489109167798 1.0310800823011237 1.1970576741060126 0.19004432492075995 0.08215182176911623 0.21737068983968347 1.059676852841043 0.017066263476747022 0.014805855484448913 4.925768353039905e-10 9.307526015834723 0.1659775918048889 EAYPT(ph)PTK ddPTM_A549_PD325901_60min_R1 2 EAYPTPTK 8 0 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VVE7;F8VZ43;F8VZB8;F8VVD3 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 EAY(0.022)PT(0.804)PT(0.174)K;EAYPT(0.977)PT(0.023)K 107.83 0.0019049 27431000.0 15131.0 13471.3 11899.9 13880.2 15091.099999999999 12909.3 12334.0 13815.5 13517.8 13610.7 16372.3 True False 16667.087981146524 14606.573728531463 12707.498773911846 14737.548429778633 14031.153197468693 12804.170940864771 12803.377119423778 13539.939014449923 12949.693875415769 12751.318079183411 14358.610892560784 1.1607730097193292 1.0172692774966936 0.8850089238434352 1.0263909608006843 0.9771943332441896 0.8917416201798901 0.8916863347872478 0.9429839081066668 0.9018765096646656 0.8880607027097507 1.0 13.80962856357456 -5.360289251910409 3.0584913780207748 0.9467791516583726 1.1736722605227365 0.6466842808076445 0.048633475296512234 0.15267816395414485 2.235761859587097 0.007025071091294855 0.07254720273026632 4.362251976461588e-06 5.360289251910409 0.22689310886436398 EAYSGCSGPVDSECPPPPS(ph)SPVHK ddPTM_A549_PD325901_60min_R1 2 EAYSGCSGPVDSECPPPPSSPVHK 24 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 EAYSGCSGPVDSECPPPPS(0.5)S(0.5)PVHK;EAYSGCSGPVDSECPPPPS(0.5)S(0.5)PVHK 139.67 4.0765e-24 40988000.0 4746.700000000001 5873.9 6942.3 5115.5 4944.1 5486.0 5221.5 5588.0 4825.9 5699.4 6640.2 True False 5228.5814896641505 6368.91416745384 7413.446225441237 5431.472816856567 4596.843472219056 5441.323834877499 5420.207039814437 5476.5429562988065 4623.084205519309 5339.5389113343135 5823.497495695905 0.8978421461550465 1.0936579215773763 1.2730229953598244 0.9326822619690178 0.7893612859997865 0.934373860192974 0.9307477239958399 0.9404216212587831 0.793867295201241 0.9168955452081363 1.0 12.507670156726043 -6.494872754085859 24.491092792519407 0.9000353956615033 1.0910777502282751 0.4073403551877133 0.09908754785357454 445.96935209033984 389997.39216193254 0.015259455658502138 0.03537967439006164 3.1998325058279845e-07 6.494872754085859 0.19104235456677188 EAYSGCSGPVDSECPPPPS(ph)SPVHKAELEK ddPTM_A549_PD325901_60min_R1 2 EAYSGCSGPVDSECPPPPSSPVHKAELEK 29 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 EAYSGCSGPVDS(0.01)ECPPPPS(0.878)S(0.112)PVHKAELEK;EAYSGCSGPVDS(0.002)ECPPPPS(0.573)S(0.425)PVHKAELEK 111.52 1.7419e-15 18541000.0 5337.5 5871.9 6339.6 4987.8 6622.0 5893.6 5540.299999999999 5253.5 4940.700000000001 6555.1 7587.4 True False 5879.359070740177 6366.745620434844 6769.8433791117195 5295.885077884312 6156.893564659815 5845.60447561685 5751.139148268491 5148.71482120898 4733.059560747068 6141.209867299637 6654.19790049142 0.8835563893141771 0.9568013629358172 1.0173793266070068 0.7958712916388021 0.9252645708365723 0.8784837125425959 0.8642873617936375 0.7737543875616836 0.71128926904887 0.9229076079697152 1.0 12.700049058278701 -6.262827391791865 24.99563585403228 0.8563925155165742 0.9530012583957361 0.21193769472460666 0.08026630728086792 195.46777487978343 3520064.3255731757 0.015497334200871495 0.03790498893362502 5.459748129822178e-07 6.262827391791865 0.09660874287916188 EAYSGCSGPVDSECPPPPSS(ph)PVHK ddPTM_A549_MK2206_60min_R1 3 EAYSGCSGPVDSECPPPPSSPVHK 24 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 EAYSGCSGPVDSECPPPPS(0.181)S(0.819)PVHK;EAYSGCSGPVDSECPPPPS(0.16)S(0.84)PVHK;EAYSGCSGPVDSECPPPPS(0.192)S(0.808)PVHK 140.57 4.4577e-28 18008900.0 2771.2 3297.7 2319.6 2722.8 2901.5 2937.6 2445.9 2617.8999999999996 3532.9 3376.0 3992.6000000000004 True False 3238.910810664882 3465.538844384458 2648.554159563795 3389.886122231136 2474.693193593808 3248.4548821789367 2890.288369757586 2988.9953419825088 2732.7037908820116 2613.3592552661717 3001.127229845752 1.0792314229314934 1.1547457268456343 0.8825197856406515 1.1295376245696072 0.8245878978349741 1.0824115851782454 0.9630675904087337 0.9959575562999817 0.9105591271525211 0.8707925573020406 1.0 11.5512887665362 -5.750243699829032 24.99667692807077 0.9669978761869683 1.1169886196910166 0.31615656883909127 0.08758991895194304 169.14639868659506 377646.87517047045 0.010143916677317916 0.0385687362594724 1.777281826971508e-06 5.750243699829032 0.14999074350404829 ECELS(ph)PGVNR ddPTM_A549_PD325901_60min_R1 2 ECELSPGVNR 10 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;H7C3A1 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 ECELS(1)PGVNR;ECELS(1)PGVNR 70.942 0.0028685 3814400.0 1186.69 1695.93 1436.46 1372.6399999999999 1855.12 1184.94 1297.33 1286.26 1034.91 1271.3600000000001 1403.5900000000001 True False 1307.1618952049953 1838.8519729668521 1533.9468137356955 1457.424855308377 1724.822771016568 1175.2902415056055 1346.7006030762152 1260.604535248551 991.4163316964698 1191.0861126283455 1230.957328090091 1.061906749629689 1.4938389260169955 1.2461413395342567 1.1839767488688375 1.4012043566877663 0.9547774034776196 1.0940270408607153 1.0240846749776935 0.80540268055816 0.9676095876340342 1.0 10.265565035420403 -7.598895583667055 1.1853021092421612 0.9148197364657417 1.2862021499266523 0.5232725767299878 0.13415726777255332 0.23095617372342522 0.6529998013677519 0.022862728269781696 0.04070356815461118 2.5182823192809853e-08 7.598895583667055 0.3713824134609106 ECINAAPDS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 ECINAAPDSPSK 12 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 ECINAAPDS(0.98)PS(0.02)K;ECINAAPDS(0.914)PS(0.086)K 171.08 1.0989000000000002e-15 138073000.0 10412.2 10114.400000000001 9063.5 8350.3 13333.8 11224.0 11314.6 11923.900000000001 13600.3 14215.8 13855.0 True False 12169.524806150717 10629.179757904652 10348.840586828099 10396.123874859206 11372.41568317805 12411.716230111786 13370.316361445355 13614.149340412248 10519.853765216292 11004.440906698106 10414.421121452919 1.1685262833363266 1.0206212744757697 0.9937029111978457 0.998243085584851 1.0919873078448628 1.1917816732554238 1.2838271283176284 1.3072401414964996 1.0101237161944787 1.0566541124431574 1.0 13.346295029929525 -8.947443908716085 24.999770618255635 1.0044654674164886 1.1270412256011364 0.1825807193204103 0.10118904432258913 114.92903331607629 54669.19101583068 0.019365236050617678 0.020614253633678928 1.1286416977815023e-09 8.947443908716085 0.12257575818464783 ECINAAPDS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 ECINAAPDSPSK 12 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 ECINAAPDS(0.997)PS(0.003)K;ECINAAPDS(0.998)PS(0.002)K 239.16 1.4940999999999998e-50 179568000.0 36999.7 40767.0 40078.0 36774.0 40404.0 37164.0 37751.0 38299.0 32663.0 38774.0 41688.0 True False 40755.882306260464 44202.57816179897 42797.93408859228 39045.44646018641 37566.16242623301 36861.34870568491 39187.63496313984 37535.09640001574 31290.28769864217 36325.80302278776 36560.64028200523 1.1147474987280266 1.209020898453877 1.170601328600281 1.0679639677810613 1.027502859262634 1.0082249222486315 1.0718530819173753 1.0266531469496754 0.8558462723105789 0.9935767738911002 1.0 15.158003715907824 -7.00895973904863 0.6328520454453698 0.938549399595526 1.1842182517396165 0.5962934732656188 0.05779027751190811 0.4443571265798049 0.31793090336391927 0.014166592652902162 0.05277383657990265 9.795807925183332e-08 7.00895973904863 0.2456688521440905 ECLGRLDS(ph)LPEHEDSEK ddPTM_A549_MK2206_60min_R1 1 ECLGRLDSLPEHEDSEK 17 1 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ECLGRLDS(1)LPEHEDSEK 58.49 0.0025578000000000003 700030.0 105.87 179.96 153.85 241.32 381.26 196.57 66.382 313.68 419.76 287.8 354.9 True False 123.73826772701034 189.1191953286919 175.66824342511202 300.4434108332667 325.1771590520682 217.3709069273943 78.44275013747419 358.14510060471116 324.68503021897965 222.7857801142193 266.76853525829216 0.4638413132463458 0.7089261675691318 0.6585043594253929 1.12623256165638 1.2189486992430472 0.8148296301770753 0.2940479845628117 1.3425312706310955 1.2171039208376326 0.8351276506373302 1.0 8.059444703734327 -5.083510819465244 0.49050086720703434 1.0762159944992586 1.910099137479521e-23 0.19519787325844296 0.286079535115435 4.837954740855337 0.6808548376408774 0.057105620519503505 3.1083680788711177 8.250669305453536e-06 5.083510819465244 -1.0762159944992586 ECNS(ph)FLR ddPTM_A549_MK2206_60min_R1 2 ECNSFLR 7 0 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8;A0A494C1G2;F6RJN6;A0A494C1B5;A0A494C0L9;A0A494C0K4;Q02297-3;Q02297-12;A0A494C043 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 1 ECNS(1)FLR;ECNS(1)FLR 63.216 0.026695 8622000.0 1601.06 2170.59 1526.3000000000002 1465.37 2981.0 2667.3 1804.35 1917.51 3311.8 3017.4 3035.9 True False 1871.2797858411925 2281.063759660509 1742.7522908010947 1824.3857157829582 2542.498848906822 2949.551915589557 2132.177039115296 2189.3229146280896 2561.6825878578647 2335.7672443246875 2282.002243422512 0.820016628482659 0.9995887454691562 0.7636943810306432 0.7994671000177337 1.1141526509166009 1.2925280525429566 0.9343448479338431 0.9593868371244791 1.1225591890812046 1.0235604505022482 1.0 11.15608449459409 -6.761528537659762 24.999999978675916 1.0633377413247687 0.8508273896075833 0.49188191207225573 0.10658574215793047 1.655231449318297 464308.3554981645 0.01574382426566185 0.031164622728853418 1.7316952366421407e-07 6.761528537659762 -0.21251035171718535 ECNS(ph)FLR ddPTM_A549_PD325901_60min_R1 2 ECNSFLR 7 0 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8;A0A494C1G2;F6RJN6;A0A494C1B5;A0A494C0L9;A0A494C0K4;Q02297-3;Q02297-12;A0A494C043 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 1 ECNS(1)FLR;ECNS(1)FLR 62.823 0.031319 7043000.0 2601.1 3172.3 3221.2 2298.6 2873.2 3066.8 3106.3 2732.0 2014.8 2392.5 2901.7 True False 2865.161757171384 3439.64085418782 3439.8100026491697 2440.5793015006375 2671.3963440018997 3041.8249975942986 3224.5119463325836 2677.50811678746 1930.1249626557349 2241.437141693397 2544.8092953918267 1.1258846634832935 1.35163010462763 1.3516965726579284 0.9590421199419814 1.049743235707013 1.1953056769725237 1.2670937473277748 1.0521448981013728 0.7584556399376684 0.8807878632604101 1.0 11.313341831375194 -8.538527855436026 5.905379784811957 0.8862198144163246 1.183710787731126 0.5457361530628557 0.122380753945277 0.10515088463704828 12.877622988547344 0.024060491988927356 0.0277261305956487 2.8938242026410383e-09 8.538527855436026 0.29749097331480134 ECPDQLGPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ECPDQLGPSPK 11 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 ECPDQLGPS(1)PK;ECPDQLGPS(1)PK 120.84 1.1344e-05 17863900.0 6801.4 7712.799999999999 6292.2 5906.6 8078.200000000001 6876.8 5975.2 7043.7 9750.7 9620.8 10603.6 True False 7949.310041735037 8105.348575967627 7184.528575102309 7353.717265157351 6889.907481126836 7604.4984115496 7060.816495758426 8042.166045426557 7542.182018668304 7447.454598064209 7970.433475527836 0.9973497760369425 1.0169269464269453 0.9013974706848074 0.9226245081570493 0.8644332208883478 0.9540884363313751 0.8858760966310968 1.0089998329600223 0.9462699916918671 0.9343851398961719 1.0 12.960442472615407 -10.365866129431932 0.5540805763143514 1.0042934046790035 0.9397438447402301 0.0 0.05067995036279576 1.522845355302385 0.7779774211825771 0.04828524354480003 0.011375159897110803 4.306593400753289e-11 10.365866129431932 -0.06454955993877343 ECPDQLGPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ECPDQLGPSPK 11 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 ECPDQLGPS(1)PK 112.43 4.6973e-05 13371000.0 10546.0 10082.0 9220.4 7611.3 7952.7 7061.7 6341.4 8803.7 7295.7 10158.0 12308.0 True False 11616.622156445132 10931.645522782079 9846.151790769403 8081.4327144835115 7394.129787325596 7004.191856499171 6582.72544714723 8628.103297130958 6989.087100480168 9516.622146424876 10794.19402684034 1.0761917126521703 1.012733835949211 0.9121710955247258 0.7486832916277582 0.6850099015211045 0.6488851172290283 0.6098394591369148 0.7993281643517541 0.6474857764369837 0.8816426796443798 1.0 13.39796790480982 -5.9163933291608135 2.391102417283505 0.783725971921414 1.056936410434744 0.5019687141304904 0.11146536983649172 0.28008012095467466 3.13822867238659 0.021796374430641283 0.0914881114836828 1.2122904133862278e-06 5.9163933291608135 0.27321043851333005 ECRES(ph)GSEQER ddPTM_A549_PD325901_60min_R1 1 ECRESGSEQER 11 1 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 ECRES(0.951)GS(0.049)EQER 62.376999999999995 0.0020336 16951000.0 423.09 722.31 629.79 492.26 681.81 574.97 599.6 707.32 448.09 813.55 675.0 True False 466.0417853376041 783.181598647165 672.5313366349252 522.6657821964258 633.9220177168088 570.2876349506957 622.4181061137099 693.2119477181942 429.2583355749492 762.1823141586881 591.9792791775455 0.7872603007069603 1.3229881960315613 1.136072427347952 0.8829122920021473 1.0708517004134597 0.9633574265352891 1.0514187371194037 1.1710071147782304 0.7251239201671561 1.2875151900884279 1.0 9.209402868414468 -8.756283592176635 24.99997229482333 0.8701974074113417 1.0528401706540793 0.0 0.1939217289756311 144.0719633329877 698591.6718019089 0.026903287881117312 0.030056770347677505 1.7527356002840329e-09 8.756283592176635 0.18264276324273765 ECS(ph)PTSSLER ddPTM_A549_MK2206_60min_R1 1 ECSPTSSLER 10 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ECS(0.997)PT(0.003)SSLER 168.69 2.2179000000000002e-10 15289000.0 2515.7 2414.0 1806.2 2303.3 2963.7 2923.1 2468.6 2348.4 3193.0 3122.8 3285.8 True False 2940.288657040144 2536.862288972341 2062.3463196258526 2867.608603399065 2527.7436559896514 3232.4205018032562 2917.112665924026 2681.2928916733727 2469.790598173247 2417.357311121209 2469.8451765333793 1.1904748868376716 1.0271341349958727 0.8350103638967835 1.1610479193776744 1.023442149332428 1.3087543027050024 1.181091306305451 1.0856117286820288 0.9999779021127919 0.9787485199838148 1.0 11.270204893254157 -8.731270658779293 5.1588026347628775 0.9997933396257649 1.0997478555215152 0.15164514732262346 0.1144041202997003 0.29136082914270967 19.531398175920717 0.020067380246914047 0.022360449465445506 1.85664700443652e-09 8.731270658779293 0.09995451589575033 ECS(ph)PTSSLER ddPTM_A549_PD325901_60min_R1 1 ECSPTSSLER 10 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ECS(0.925)PT(0.069)S(0.006)SLER 173.28 1.383e-10 20269000.0 3687.1 3412.3 4364.5 3362.4 3320.8 2869.0 3015.9 3271.0 2948.0 3080.5 3590.8 True False 4061.4116777004383 3699.8664964678896 4660.701215870576 3570.0878114355446 3087.5584641380715 2845.635815213917 3130.6717248638042 3205.7573389501413 2824.1058119461527 2885.9967042785797 3149.1543639566376 1.28968326360402 1.1748761949602655 1.4799849982630928 1.1336655491698542 0.9804404952251448 0.9036190311225721 0.9941309199369918 1.0179740236430923 0.8967822740825923 0.9164354524217659 1.0 11.620748761302298 -6.584148578617389 3.477605709274297 0.9567247532951343 1.3031164094762875 0.8033545971355115 0.07727434203710548 0.07262474734187854 1.7839499851649403 0.010823304680550948 0.024299586626229226 2.6052620985110165e-07 6.584148578617389 0.3463916561811532 ECS(ph)VEKGTGDSLR ddPTM_A549_MK2206_60min_R1 1 ECSVEKGTGDSLR 13 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 ECS(0.966)VEKGT(0.015)GDS(0.019)LR 53.565 0.005919300000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ECSEAMEVETSVISIDS(ph)PQK ddPTM_A549_MK2206_60min_R1 2 ECSEAMEVETSVISIDSPQK 20 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ECSEAMEVET(0.002)S(0.002)VIS(0.013)IDS(0.983)PQK;ECSEAMEVET(0.068)S(0.068)VIS(0.037)IDS(0.827)PQK 66.85300000000001 0.00035299 4241900.0 1480.35 1655.3000000000002 1821.79 1576.52 2719.0 2142.0 2149.26 2065.2 3086.3 3024.3 2433.7 True False 1730.1968889173477 1739.547699642053 2080.1472160509247 1962.7674707726721 2319.0387018375204 2368.6650182554763 2539.75272152794 2357.9484244097453 2387.257977808361 2341.108529532429 1829.345123297001 0.9458012415935163 0.950912803433664 1.1370993857637464 1.07293448665127 1.2676879131795273 1.2948158267623482 1.388339843140469 1.2889576681736525 1.3049795511006923 1.2797522456085733 1.0 10.837111563520518 -5.877716230342252 1.4642674360049743 1.1928008677458248 0.9206929231944208 0.4714015555360548 0.110596719432076 0.513576597861134 1.8555100268152738 0.021651860440442584 0.14518876742657397 1.3252071477312262e-06 5.877716230342252 -0.2721079445514041 ECSEAMEVETSVISIDS(ph)PQK ddPTM_A549_PD325901_60min_R1 3 ECSEAMEVETSVISIDSPQK 20 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ECSEAMEVET(0.22)S(0.22)VIS(0.19)IDS(0.37)PQK;ECSEAMEVET(0.005)S(0.005)VIS(0.02)IDS(0.97)PQK;ECSEAMEVET(0.107)S(0.107)VIS(0.082)IDS(0.704)PQK 57.802 0.0015639 6322600.0 1943.29 2254.2 2290.3 2627.4 2902.5 2560.4 2605.6000000000004 2936.5 2484.1 2734.2 2556.0 True False 2140.571370225513 2444.1693451155884 2445.733530692722 2789.6885307416596 2698.6384130814126 2539.548951297916 2704.757533839029 2877.9292038603153 2379.701915690445 2561.5621453785075 2241.6282038189734 0.9549181111206159 1.0903544758009172 1.0910522657263246 1.2444920732122202 1.203874223425566 1.1329037290713004 1.2066039895603742 1.2838566176841018 1.0615952777700783 1.1427239097966715 1.0 11.13033129742327 -8.970620102737817 14.52796206920679 1.0271602235465047 1.154344723547216 0.10680142671771231 0.09170513463673488 1.7686428857528822 874.1302554638654 0.015454878796165736 0.016174016596205692 1.0699904395882012e-09 8.970620102737817 0.12718450000071124 ECSPT(ph)SSLER ddPTM_A549_MK2206_60min_R1 1 ECSPTSSLER 10 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ECS(0.065)PT(0.851)S(0.065)S(0.019)LER 163.84 5.301600000000001e-09 15100000.0 1648.6 1734.3 1275.1 1216.0 1842.6 1550.5 1600.6 1410.6 2484.1 1976.6 2063.4 True False 1926.8433755997855 1822.5684622057709 1455.9283535350037 1513.920054588314 1571.555980877461 1714.5728808613967 1891.4083014980138 1610.5568697813223 1921.4553162925654 1530.0846871916813 1551.000833057088 1.2423225923108605 1.1750918654333742 0.9387024961587594 0.9760923542538104 1.0132528283559061 1.10546225657526 1.2194760061927037 1.0383984556648154 1.2388486681243724 0.9865144199670222 1.0 10.59898374592133 -7.500242798183355 23.46406435289158 1.118179039991937 1.0622493977380063 0.0 0.10984962803687866 1021.0481849815416 1058401.494307259 0.018341331030147148 0.029160777914882897 3.160510240318529e-08 7.500242798183355 -0.0559296422539306 ECSPT(ph)SSLER ddPTM_A549_PD325901_60min_R1 1 ECSPTSSLER 10 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ECS(0.322)PT(0.671)S(0.005)S(0.002)LER 165.39 3.1312e-09 22196000.0 2303.1 2276.4 3150.7 1975.4 1763.9 2006.8 2192.4 2706.3 1453.9 1978.2 2628.3 True False 2536.909016547389 2468.2402170264936 3364.5254486982285 2097.415971541095 1640.0097491246518 1990.4572861524198 2275.8329817273143 2652.32072344872 1392.7976390734425 1853.296114398275 2305.0357621664352 1.1005942112425289 1.0708034372129078 1.459641322673454 0.9099277355982519 0.7114899369644725 0.8635255551443799 0.9873308774994128 1.1506635892520305 0.6042412278082805 0.8040205470202408 1.0 11.17057341861385 -6.452772474919238 9.278574069371425 0.8451582744827291 1.195449823536398 0.4304016769248441 0.16782157163761124 0.35915726638877604 45.53382302250668 0.027466400766302728 0.06384806117079682 3.5255552504825615e-07 6.452772474919238 0.3502915490536689 EDAANNYAR ddPTM_A549_MK2206_60min_R1 2 EDAANNYAR 9 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;F8VS66;F8VRZ4;F8VWV9;F8VX09;C9JDL2;C9K0S6;A6NHL2-2;A6NHL2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA4A;TUBAL3 Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 98.03299999999999 0.0023433000000000004 12240200.0 3126.6 3439.8999999999996 2381.2 2647.1 4388.6 2972.8 2615.3 2977.1 3985.3 3852.1 4126.0 False True 3654.2936419691164 3614.97621699915 2718.8899658360524 3295.639618832834 3743.042753543267 3287.37972281507 3090.4661570084686 3399.11304198637 3082.635913216362 2981.9079346003614 3101.400328193051 1.1782721529852271 1.1655948392529256 0.8766652731413561 1.0626295447492107 1.2068879723515256 1.0599662652161952 0.9964744405663513 1.0959929974492437 0.9939496959466625 0.9614714706429697 1.0 11.59870404544723 -8.364405233196766 0.9503994942570014 0.996086056459745 1.0867665012670134 0.1830105759060514 0.08745750739942612 0.7025272185555546 1.2461872575477015 0.018329268155769757 0.02319378819952417 4.32110447559515e-09 8.364405233196766 0.09068044480726833 EDAEAPGIRDHES(ph)L ddPTM_A549_PD325901_60min_R1 1 EDAEAPGIRDHESL 14 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 EDAEAPGIRDHES(1)L 50.787 0.006997 1430100.0 206.99 148.91 0.0 188.93 136.99 88.23899999999999 199.9 150.89 218.47 172.79 139.35 True False 228.0034724220158 161.45916829969048 0.0 200.59977700883815 127.3682949898441 87.52041083954718 207.50730388947719 147.88038057908489 209.28846564988996 161.88000991147413 122.21083341243106 1.8656568002654967 1.3211526653681027 0.0 1.6414238525963076 1.0422013452768781 0.7161428197137617 1.6979452483495618 1.2100431397928981 1.7125197480946197 1.3245962357949848 1.0 6.933228368692721 -7.764482417678988 24.999906200556037 1.3581673302491655 1.0802050405760786 0.07728876725805622 0.4938855241138321 189.72875194459024 1558710.6534240658 0.07910721430480142 0.11187161225677066 1.719956971926007e-08 7.764482417678988 -0.2779622896730869 EDAEGVAAEEEQEGDS(ph)GEQETGATDARPR ddPTM_A549_MK2206_60min_R1 1 EDAEGVAAEEEQEGDSGEQETGATDARPR 29 1 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 EDAEGVAAEEEQEGDS(0.999)GEQET(0.001)GATDARPR 107.0 3.567e-15 62156000.0 0.0 0.0 0.0 233.56 350.8 188.85 322.42 301.77 307.71 322.77 192.82 True False 0.0 0.0 0.0 290.78221048490667 299.19778470194996 208.83398165151556 380.99954052792066 344.5468216318658 238.01417631189778 249.85603282649924 144.93747243872616 0.0 0.0 0.0 2.0062597035272427 2.064323184802598 1.4408556885784132 2.628716605286409 2.3772100881469873 1.642185228616573 1.7238884370094731 1.0 7.179286830303498 -6.251905406444693 24.99999999999591 1.5825452766500552 4.229230958978852e-05 0.7333996796638969 0.4786895428053717 366.2879933824795 960478.6581448133 0.08316429870203605 0.21694929215227124 5.598795354148683e-07 6.251905406444693 -1.5825029843404654 EDAEGVAAEEEQEGDS(ph)GEQETGATDARPR ddPTM_A549_PD325901_60min_R1 2 EDAEGVAAEEEQEGDSGEQETGATDARPR 29 1 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 EDAEGVAAEEEQEGDS(1)GEQETGATDARPR;EDAEGVAAEEEQEGDS(0.999)GEQET(0.001)GATDARPR 280.94 3.8266999999999988e-168 147600000.0 1499.15 1762.24 1615.8700000000001 1874.49 2133.35 1597.09 1786.45 1933.69 1960.76 2121.69 1365.4499999999998 True False 1651.342604384101 1910.750149381818 1725.532655215668 1990.2729900243326 1983.510855657961 1584.083828553501 1854.4343323329492 1895.1210359995414 1878.3560759265715 1987.7261313101199 1197.5083063007107 1.3789821713098216 1.5956049234300695 1.4409358550055544 1.6620118453896953 1.6563650082606394 1.3228165685522317 1.5485774274598438 1.5825535622828912 1.5685536927331263 1.6598850470194355 1.0 10.225819947652589 -10.682883944835407 0.76477977601094 0.968801705098631 1.5352245621353615 0.0 0.21955966762774823 0.2632687475192064 0.25023901725111686 0.09182630332126242 0.019638355123845597 2.0754680642368663e-11 10.682883944835407 0.5664228570367306 EDAGDNDDT(ph)EGAIGVR ddPTM_A549_MK2206_60min_R1 1 EDAGDNDDTEGAIGVR 16 0 Q9H0S4;Q9H0S4-2 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 EDAGDNDDT(1)EGAIGVR 48.004 0.026813 692620.0 0.0 138.5 0.0 132.47 351.96 211.94 0.0 199.89 260.36 0.0 264.72 True False 0.0 145.54905841866983 0.0 164.92515594680427 300.18715023859255 234.367350125614 0.0 228.2250196374511 201.3888757094854 0.0 198.98271809967648 0.0 0.7314658268250205 0.0 0.828841607562061 1.508609155133863 1.1778276644518058 0.0 1.1469590013496864 1.0120922944102293 0.0 1.0 7.63649932609856 -6.414503439067537 5.916274840685238 0.9878795544586499 0.2985630979319646 0.1808052424885379 0.4911418826392388 0.17674064290830224 8.252919417309911 0.0522359785399239 0.12253637931176543 3.8503176569792545e-07 6.414503439067537 -0.6893164565266854 EDAGDNDDT(ph)EGAIGVR ddPTM_A549_PD325901_60min_R1 1 EDAGDNDDTEGAIGVR 16 0 Q9H0S4;Q9H0S4-2 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 EDAGDNDDT(1)EGAIGVR 79.771 0.0009609999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EDAHADPEIQPMKEDDGTFGEYS(ph)DAEDHKPLK ddPTM_A549_MK2206_60min_R1 4 EDAHADPEIQPMKEDDGTFGEYSDAEDHKPLK 32 2 H7C132;C9JYY6;F8W775;Q92823-3;Q92823-4;Q92823-6;Q92823 H7C132 NRCAM Neuronal cell adhesion molecule 1 EDAHADPEIQPMKEDDGT(0.006)FGEYS(0.993)DAEDHKPLK;EDAHADPEIQPMKEDDGTFGEYS(1)DAEDHKPLK;EDAHADPEIQPMKEDDGT(0.008)FGEYS(0.992)DAEDHKPLK;EDAHADPEIQPMKEDDGTFGEYS(1)DAEDHKPLK 122.37 1.2212000000000002e-21 49492600.0 9962.0 12660.099999999999 10821.6 9803.899999999998 13459.399999999998 10627.5 10366.2 10122.6 15571.599999999999 14817.400000000001 16610.7 True False 11643.342052483962 13304.445014340814 12356.26560317967 12205.855940113795 11479.54008955937 11752.094996036445 12249.6043577338 11557.509549162356 12044.657462735531 11470.139048868772 12485.80475800201 0.9325263591857686 1.0655656781605645 0.9896250856606323 0.9775786324298561 0.9194073038986345 0.9412364860586708 0.9810824848821353 0.9256519522103915 0.9646680927808235 0.9186543655920689 1.0 13.608001191040781 -4.92849184886228 18.449695660252637 0.9772294417758498 5.3710419031063644e-05 0.019108022898028265 0.041972248194500655 140.14004476769557 70312.7879524446 0.005219912229882734 5244.038928612541 1.1789846510314431e-05 4.92849184886228 -0.9771757313568188 EDAHADPEIQPMKEDDGTFGEYS(ph)DAEDHKPLK ddPTM_A549_PD325901_60min_R1 3 EDAHADPEIQPMKEDDGTFGEYSDAEDHKPLK 32 2 H7C132;C9JYY6;F8W775;Q92823-3;Q92823-4;Q92823-6;Q92823 H7C132 NRCAM Neuronal cell adhesion molecule 1 EDAHADPEIQPMKEDDGT(0.086)FGEY(0.008)S(0.906)DAEDHKPLK;EDAHADPEIQPMKEDDGTFGEYS(1)DAEDHKPLK;EDAHADPEIQPMKEDDGT(0.001)FGEYS(0.999)DAEDHKPLK 138.03 1.4997e-30 51249000.0 5141.9 6207.8 5778.900000000001 5071.5 6423.799999999999 5821.7 5745.3 6632.9 6167.4 6572.299999999999 6735.0 True False 5663.9019027332815 6730.953092275995 6171.090905348717 5384.75503678782 5972.61444890693 5774.290005378484 5963.94053544879 6500.601606090611 5908.205625711229 6157.323856364265 5906.637696682622 0.9589045737330953 1.1395574670266873 1.0447722075140349 0.9116447145238128 1.0111699338290823 0.977593396090898 1.0097014311201704 1.1005587171431863 1.0002654520404202 1.0424414315816997 1.0 12.52812140682594 -6.0183516422953565 24.720791892278847 1.001590053560219 1.0599644800580081 0.08122701549606592 0.057871043689056524 787.7005697828023 1061085.516085831 0.007212616238665069 0.019510098977863873 9.586241323641156e-07 6.0183516422953565 0.058374426497789234 EDAVLEYLK ddPTM_A549_PD325901_60min_R1 2 EDAVLEYLK 9 0 P26038 P26038 MSN Moesin 0 ; 110.87 0.0009519999999999999 1189590.0 1457.94 1558.9499999999998 1469.5700000000002 1134.25 1569.95 1259.8 1533.3899999999999 1613.55 1336.63 1394.76 1825.72 False True 1605.9489955212994 1690.3281876355 1569.3038574423015 1204.3100464313482 1459.6821280334746 1249.540606485358 1591.743995553205 1581.3664794445124 1280.4560893560324 1306.6946155687692 1601.1680141926345 1.0029859335724214 1.0556844582533227 0.9800994296239424 0.7521447067118712 0.9116358277800708 0.7803931851058244 0.9941142849745338 0.9876330687519344 0.7997012668290677 0.8160883829718837 1.0 10.644908985723397 -6.0103036651147015 24.122938606904455 0.8979035597989232 1.0264744369315504 0.31734112266919257 0.08566150443102034 331.0286127668335 775014.7324212802 0.01304875302815777 0.03733740714861264 9.76554161091269e-07 6.0103036651147015 0.12857087713262716 EDDDVIVNKPHVS(ph)DEEEEEPPFYHHPFK ddPTM_A549_MK2206_60min_R1 4 EDDDVIVNKPHVSDEEEEEPPFYHHPFK 28 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-2;H7C1M2;H7C2G8;J3QSZ5 P18583-5 SON Protein SON 1 EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK 250.22 4.320999999999999e-137 483560000.0 6864.75 8752.2 6871.360000000001 7569.530000000001 10002.0 7803.800000000001 8196.1 7998.0 11319.9 10792.0 10944.300000000001 True False 8023.351972976234 9197.649596331285 7845.822171865965 9424.065189809116 8530.719049569287 8629.592936256808 9685.225277963184 9131.740992847735 8755.960724165785 8354.079704630489 8226.528262686192 0.9753023045418171 1.1180475289983376 0.9537221439392569 1.1455701468327413 1.0369768117448572 1.0489957197860527 1.1773162345886947 1.1100358135603081 1.064356730393912 1.0155048931786745 1.0 13.006068001466037 -4.456713158319264 16.32368329318636 1.0506909655661336 1.0563372239850843 0.0 0.06899702014336424 0.0 0.0 0.008811328423448814 0.0 3.493709909283191e-05 4.456713158319264 0.0056462584189507226 EDDDVIVNKPHVS(ph)DEEEEEPPFYHHPFK ddPTM_A549_PD325901_60min_R1 4 EDDDVIVNKPHVSDEEEEEPPFYHHPFK 28 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-2;H7C1M2;H7C2G8;J3QSZ5 P18583-5 SON Protein SON 1 EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK 242.09 1.1172999999999998e-119 839020000.0 9647.199999999999 10115.2 10958.0 10467.999999999998 11404.9 9389.6 10143.8 9180.099999999999 10091.199999999999 10306.900000000001 11670.699999999999 True False 10626.576642106715 10967.643403297487 11701.675775807029 11114.584585447092 10603.859168769062 9313.134210711958 10529.827859900342 8996.995703850864 9667.101957093282 9656.12057501344 10235.277886662787 1.0382303988007804 1.0715530662424924 1.1432689864781347 1.0859094114025079 1.0360108720239594 0.9099053600535418 1.0287779165841089 0.8790182155752231 0.9444884705758821 0.943415575223021 1.0 13.321262651453324 -7.009190099078892 4.154878457869542 0.9658270088740281 1.0865941859771198 0.6514152321650966 0.04540599361213581 0.11087840822159965 4.506269736883309 0.006768705974035137 0.012601283225697863 9.790613375533525e-08 7.009190099078892 0.1207671771030917 EDDGTFGEYS(ph)DAEDHKPLK ddPTM_A549_PD325901_60min_R1 2 EDDGTFGEYSDAEDHKPLK 19 1 H7C132;C9JYY6;F8W775;Q92823-3;Q92823-4;Q92823-6;Q92823 H7C132 NRCAM Neuronal cell adhesion molecule 1 EDDGTFGEYS(1)DAEDHKPLK;EDDGTFGEYS(1)DAEDHKPLK 179.03 3.4076e-35 29457000.0 5119.0 5841.1 5949.5 6280.4 6535.6 5763.8 6009.2 5693.4 5978.799999999999 7864.5 5708.3 True False 5638.677111591375 6333.349996342229 6353.268847249854 6668.326044176716 6076.562002595993 5716.861523781798 6237.883394360413 5579.8406706141 5727.531827837056 7367.934127836036 5006.215287895084 1.1263353226589297 1.2650974103443229 1.2690762346181785 1.3320094444001598 1.2138035727886063 1.1419527916837777 1.2460277945783664 1.1145826437201032 1.1440842030278042 1.4717573464432374 1.0 12.289504618856546 -9.545901415032755 0.3494712448453147 0.9759100342638967 1.2542699145811786 0.0 0.15073360655991017 0.6092376712956714 0.17396590933402387 0.06501433855197636 0.029330999056563264 2.845106874196136e-10 9.545901415032755 0.278359880317282 EDDGTFGEYS(ph)DAEDHKPLKK ddPTM_A549_MK2206_60min_R1 2 EDDGTFGEYSDAEDHKPLKK 20 2 H7C132;C9JYY6;F8W775;Q92823-3;Q92823-4;Q92823-6;Q92823 H7C132 NRCAM Neuronal cell adhesion molecule 1 EDDGTFGEY(0.001)S(0.999)DAEDHKPLKK;EDDGTFGEY(0.001)S(0.999)DAEDHKPLKK 120.52 5.6756999999999995e-15 10532300.0 1327.83 1480.6399999999999 1519.15 1226.75 2195.8 1424.1 1479.21 1729.47 1997.18 2160.6 2043.1100000000001 True False 1551.9352416733363 1555.9982516752298 1734.5883132873519 1527.3038050709 1872.800728758672 1574.7973167589269 1747.9633097956246 1974.6276687797415 1544.8219188411042 1672.5189593981302 1535.7494000326003 1.010539376828272 1.0131849972672622 1.1294735412239332 0.9945006685586065 1.2194702656038263 1.0254259690581664 1.1381826421410417 1.2857746639769645 1.0059075515890232 1.0890572116535593 1.0 10.584727104349946 -8.941693276196467 24.99999730315133 1.0026039550940569 1.1019242903745543 0.08373091444710024 0.0908496688549701 85.32337456205195 36583.687336261435 0.014612676413465647 0.015556023078223633 1.1436857864664162e-09 8.941693276196467 0.09932033528049744 EDDLGEPQAAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EDDLGEPQAASPR 13 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 EDDLGEPQAAS(1)PR;EDDLGEPQAAS(1)PR 89.01299999999999 0.00018923 4769600.0 224.33 352.65999999999997 193.46 383.42 671.01 300.90999999999997 0.0 500.83 532.16 558.16 685.67 True False 262.19141965807336 370.6088876673509 220.8955370362182 477.35791721237774 572.3053178815723 332.75209647210784 0.0 571.8241862275486 411.62660968489655 432.0712683410441 515.3992154707049 0.508715209080438 0.7190715013581859 0.4285911394616273 0.9261906166784039 1.1104116977727565 0.6456201066744179 0.0 1.1094781851875963 0.7986558716605056 0.8383234886115244 1.0 9.009546530935422 -9.332438700492418 0.7393955206086003 0.9649768531099155 0.6702245690172625 0.09637905289992288 0.30008775691575656 0.8723918497539168 1.0376847679178653 0.10028236065142851 0.07130349840218775 4.651160214193357e-10 9.332438700492418 -0.2947522840926531 EDDLGEPQAAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EDDLGEPQAASPR 13 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 EDDLGEPQAAS(1)PR;EDDLGEPQAAS(1)PR 95.631 0.0001689 5747300.0 618.62 502.63 617.85 525.06 582.5699999999999 849.4 699.16 641.63 802.4100000000001 705.0799999999999 431.41 True False 681.421846996026 544.9883940801386 659.781016433872 557.491763702221 541.6522929573948 842.4827680176729 725.7669163950317 628.8321863010021 768.6874981559401 660.5611284702945 378.34930493331086 1.8010389819961101 1.4404371488833583 1.7438409634455843 1.4734843078421576 1.4316196326906647 2.2267326965650747 1.9182456712136893 1.6620413414314115 2.031687353810341 1.7459028465421056 1.0 8.563574984527763 -10.911839020305814 1.1417275955593218 0.9962187259136542 1.761551919809779 0.0005016729798045239 0.3199883186330348 0.29907890643257334 0.686850233390203 0.18201502997404317 0.04231669168314478 1.2250702112098534e-11 10.911839020305814 0.7653331938961249 EDDSSASTSQSTR ddPTM_A549_PD325901_60min_R1 2 EDDSSASTSQSTR 13 0 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 96.015 0.00046458 4725700.0 1113.03 895.35 1151.04 977.6100000000001 1146.07 999.97 909.67 879.52 1171.26 1130.78 1034.15 False True 1226.023986230621 970.8042867310985 1229.1564961658082 1037.9947493866007 1065.5739969268604 991.8265758589964 944.287989640524 861.9772836299076 1122.0360153663669 1059.382357819878 906.9561060169762 1.351800796198259 1.0703983139763185 1.3552546677962398 1.144481791897404 1.1748903721553592 1.093577262757225 1.0411617313956858 0.9504068365727208 1.237144783438246 1.1680635377960054 1.0 9.824888920061053 -6.796780409323873 1.709928752634355 1.0947734886493592 1.2387092355110565 0.3189495002154724 0.10402175467397404 0.42081894664182745 2.4907158270453196 0.017460301574690296 0.04175697149616613 1.5966862696073157e-07 6.796780409323873 0.1439357468616973 EDDVYS(ph)MLHR ddPTM_A549_MK2206_60min_R1 2 EDDVYSMLHR 10 0 H7C353;H7C2S4;O15194-2;O15194 H7C353 CTDSPL CTD small phosphatase-like protein 1 EDDVY(0.442)S(0.558)MLHR;EDDVY(0.321)S(0.679)MLHR 54.7 0.0057363 2723900.0 93.479 140.32 76.411 0.0 346.23 0.0 0.0 0.0 208.262 89.943 314.97 True False 109.2559698578747 147.46168864482138 87.24722878359594 0.0 295.3000256481075 0.0 0.0 0.0 161.0909895260748 69.6248138318736 236.754256270229 0.4614741529004277 0.6228470438838069 0.36851387661648966 0.0 1.2472849709238383 0.0 0.0 0.0 0.6804143336802659 0.2940805159270485 1.0 7.88724655187707 -9.109042855237208 2.573945740128072 0.8821431287287665 0.3459831998513749 0.042831644246825507 0.4017973383238018 0.2335687162440298 3.2066411662247685 0.0701847466513538 0.0680218047797056 7.779597798688819e-10 9.109042855237208 -0.5361599288773917 EDDVYS(ph)MLHR ddPTM_A549_PD325901_60min_R1 2 EDDVYSMLHR 10 0 H7C353;H7C2S4;O15194-2;O15194 H7C353 CTDSPL CTD small phosphatase-like protein 1 EDDVY(0.07)S(0.93)MLHR;EDDVYS(1)MLHR 87.001 0.00022559 3931700.0 427.95000000000005 535.72 441.28 404.59 451.61 414.97 434.86 361.85 404.37 655.2 367.26 True False 471.39516895986117 580.8670045095034 471.227914432207 429.5806054094418 419.89047156992126 411.59062190286505 451.40883526452245 354.63261788416634 387.3757351345538 613.8305601828687 322.0893482529561 1.46355404646802 1.8034343813608942 1.4630347665583883 1.3337311765804387 1.303645941250302 1.277877160903869 1.4015019053346776 1.1010380188221935 1.2026965102562919 1.905777274263633 1.0 8.33131714022927 -2.0000000000099862 0.1283688731137073 0.898281425040354 3.418147847609266 0.0 0.2887129990823455 25.159866786549394 0.21062551688015665 0.30782877688752924 11.532431902804968 0.00999999999977006 2.0000000000099862 2.5198664225689122 EDEGEPGDEGQLEDEGS(ph)QEKQGR ddPTM_A549_MK2206_60min_R1 1 EDEGEPGDEGQLEDEGSQEKQGR 23 1 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 EDEGEPGDEGQLEDEGS(1)QEKQGR 55.358000000000004 0.0014352 1881300.0 201.4 393.87 385.12 105.45 253.95 211.76 122.93 0.0 336.65 363.36 252.63 True False 235.39139624274938 413.91630064520916 439.7358070060396 131.28525473383036 216.59429140553078 234.16830264508843 145.2647897683062 0.0 260.3993125195814 281.2767236355201 189.89499876670155 1.2395871285264501 2.1797114370227963 2.3156787164588986 0.6913570951656441 1.1406002939110107 1.2331462343185748 0.7649742790054914 0.0 1.3712805192910793 1.4812223884900044 1.0 7.569058099740857 -6.262496349029553 24.99986434503787 1.0412857814728538 1.9384643360521419 0.4525348935662524 0.4595268179574387 66.84505956824836 1581071.6793685188 0.06377682957817282 0.15640133968675016 5.463911431926473e-07 6.262496349029553 0.8971785545792881 EDEGEPGDEGQLEDEGS(ph)QEKQGR ddPTM_A549_PD325901_60min_R1 1 EDEGEPGDEGQLEDEGSQEKQGR 23 1 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 EDEGEPGDEGQLEDEGS(1)QEKQGR 59.691 0.00033315 2940600.0 228.34 283.6 284.84 260.97 216.0 530.46 332.57 443.14 385.36 444.7 343.99 True False 251.52090870497642 307.4999672942867 304.1709552820652 277.08952419412753 200.82890515954685 526.1401096334524 345.2261333392868 434.3012250633952 369.1646593254981 416.621566107023 301.6814107322724 0.8337302192218565 1.0192870901388684 1.0082522305360146 0.9184839182551788 0.6656986410666607 1.744025620790988 1.1443400920902553 1.439602208201076 1.2236904436021543 1.380998468204441 1.0 8.236881991759457 EDEGRRES(ph)INDR ddPTM_A549_MK2206_60min_R1 2 EDEGRRESINDR 12 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 EDEGRRES(1)INDR;EDEGRRES(1)INDR 89.13600000000001 5.6675e-05 24946000.0 936.48 859.71 729.01 819.56 777.1800000000001 1022.41 644.16 770.01 1312.8400000000001 1251.4299999999998 1280.3600000000001 True False 1094.534929262214 903.4655668816944 832.3945800412147 1020.3522367914463 662.8578515241207 1130.6007475791691 761.1955338579041 879.1612755567253 1015.4838361746839 968.7310938441182 962.4112758616718 1.1372839831726291 0.938752059064144 0.8649052654707835 1.0602039506217324 0.6887469714344805 1.1747584176701513 0.790925410943867 0.913498519403349 1.055145405757528 1.0065666499769426 1.0 9.910509735379339 -8.760724523906614 24.99916979385225 1.026040887462254 0.9408505249425094 0.05508425736389233 0.1355133884348528 36.02522806592813 1259835.0939042754 0.020971257729768773 0.023098507511927744 1.7349041108877883e-09 8.760724523906614 -0.08519036251974454 EDEGRRES(ph)INDR ddPTM_A549_PD325901_60min_R1 2 EDEGRRESINDR 12 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 EDEGRRES(1)INDR;EDEGRRES(1)INDR 92.773 5.4685e-05 30087000.0 1011.9 1169.71 887.48 1130.86 1606.7 1333.17 970.8900000000001 1269.19 1334.85 1100.26 1368.63 True False 1114.6273430785916 1268.2855667976025 947.709729650777 1200.710653830598 1493.850934814093 1322.3131055311042 1007.8377502413935 1243.875009789707 1278.7508965659156 1030.7893958284542 1200.297186460392 0.928626139969189 1.0566429556814212 0.7895625686214587 1.0003444708317824 1.2445675551563813 1.101654757211029 0.8396568463294075 1.0363058614323872 1.0653619045270606 0.8587784820759211 1.0 10.229175937454496 -6.512332856817459 24.917281678536302 1.0382518259983111 0.9309204101704908 0.09909657373203229 0.11917602173953168 663.835002917788 1568473.9111089937 0.014887151771439365 0.032652749533236616 3.0737401015783794e-07 6.512332856817459 -0.10733141582782035 EDEIS(ph)PPPPNPVVK ddPTM_A549_MK2206_60min_R1 2 EDEISPPPPNPVVK 14 0 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644 K7EMU2 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed 1 EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK 121.28 1.9899e-06 25971000.0 5608.6 6522.5 5689.0 5574.8 9165.099999999999 7435.7 5725.5 6740.7 9170.2 8381.3 8155.9 True False 6555.1945628951535 6854.467390149997 6495.785744851882 6940.62625026228 7816.925930934557 8222.540838581814 6765.749237927579 7696.214867527973 7093.164341800284 6487.95850893435 6130.564938611174 1.069264354677919 1.1180808716305382 1.0595737603137512 1.132134855394684 1.2750743217321525 1.3412370508947842 1.1036094235485419 1.2553842826223263 1.1570164271691377 1.0582970042568607 1.0 12.581804310711656 -10.356933589646944 0.8540059883971419 1.0053547869674517 1.1699224037584244 0.27018445167049177 0.08615554513612103 0.5259290520059663 0.7264842459715645 0.04973149955196751 0.01724873717574524 4.396088332980653e-11 10.356933589646944 0.16456761679097265 EDEIS(ph)PPPPNPVVK ddPTM_A549_PD325901_60min_R1 2 EDEISPPPPNPVVK 14 0 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644 K7EMU2 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed 1 EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK 135.37 4.9708e-09 44703000.0 6783.299999999999 7416.6 6991.4 7223.2 8689.2 6467.7 7287.0 7619.299999999999 6971.1 7804.900000000001 7403.700000000001 True False 7471.935622398467 8041.622910559966 7465.878446703521 7669.360658922564 8078.9005681126655 6415.029195559099 7564.3107725994 7467.327084274781 6678.1289096532655 7312.097282007432 6493.091835921175 1.1507515697009119 1.238489014751337 1.1498187050737034 1.1811569669312265 1.2442301406270673 0.9879775856657046 1.1649782513088776 1.150041809506517 1.028497529129101 1.1261348933269886 1.0 12.664689899123603 -8.304676023740397 0.49832835482123755 0.9971787861336422 1.1960349386264408 0.23732496236155998 0.07319283766572618 0.4183045029272271 0.23503802188560163 0.020285932472003908 0.027824182911585216 4.958199260687759e-09 8.304676023740397 0.19885615249279864 EDEKGDDVDDPENQNS(ph)ALADTDASGGLTK ddPTM_A549_MK2206_60min_R1 1 EDEKGDDVDDPENQNSALADTDASGGLTK 29 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EDEKGDDVDDPENQNS(0.999)ALADT(0.001)DASGGLTK 103.01 5.7014e-15 2943700.0 518.57 539.29 511.79 319.13 680.18 463.2 680.61 739.84 1153.5 1035.0 789.71 True False 606.0919381807474 566.7375575061693 584.3695177285546 397.31686432629016 580.1264230289977 512.2155165527245 804.2680270414613 844.7145856649754 892.2340917609899 801.1927811612818 593.603212112781 1.0210388451631116 0.9547413928051532 0.9844446691058807 0.6693307182623573 0.9772966372000986 0.86289209037401 1.354891635742455 1.4230290005649175 1.5030816436880583 1.3497109934928386 1.0 9.213355088483175 -7.757513684141098 24.999289939539157 1.2684604723581692 0.9088657151587404 0.6441579028365592 0.15065149079695933 76.77584749210168 488914.71291940776 0.03215209289064899 0.04670747787179557 1.7477781909835804e-08 7.757513684141098 -0.3595947571994288 EDEKGDDVDDPENQNSALADTDASGGLTKES(ph)PDTNGPK ddPTM_A549_PD325901_60min_R1 1 EDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPK 38 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EDEKGDDVDDPENQNSALADTDASGGLT(0.007)KES(0.991)PDT(0.002)NGPK 246.98 6.643799999999997e-145 33600000.0 1889.5 1773.3 1935.4 2214.7 2495.7 2397.7 2414.8 1725.5 2251.6 2215.5 2576.5 True False 2081.320649023617 1922.742214396892 2066.747882505649 2351.496989051363 2320.4106416975983 2378.1739261549014 2506.6965354292633 1691.0835488714363 2156.973082149918 2075.6129519004044 2259.6068337791803 0.9210985813592267 0.8509189234399314 0.9146493326226246 1.0406664353720763 1.0269090210781155 1.052472443702703 1.10935074985449 0.7483972537129869 0.9545789337795514 0.9185726122225223 1.0 11.141856053629304 -6.050808359946953 7.313998594098918 0.9830013323532788 0.8850722047189483 0.15737784584236814 0.08984829038356414 0.3166009711016332 40.0933624657722 0.012118083719154363 0.032724592149505086 8.89593580022372e-07 6.050808359946953 -0.09792912763433048 EDENDAS(ph)DDEDDDEKR ddPTM_A549_MK2206_60min_R1 2 EDENDASDDEDDDEKR 16 1 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 EDENDAS(1)DDEDDDEKR;EDENDAS(1)DDEDDDEKR 100.67 5.366e-07 6047900.0 994.5799999999999 1397.63 1381.74 1272.95 1463.92 927.03 314.68 447.18 571.6899999999999 1981.48 1469.45 True False 1162.440788853593 1468.7633972396063 1577.6915090686657 1584.8228071448962 1248.5793072430981 1025.127699287289 371.8532827161032 510.5691344313146 442.2031278013353 1533.862291802374 1104.5450102431607 1.052415952336507 1.3297451743648405 1.4283632576651122 1.434819579508131 1.1304014736060677 0.9280995249452185 0.33665742841411356 0.4622438467391338 0.40034867180649003 1.3886824688698753 1.0 10.109236494420468 -7.309762241275423 2.5763976967857434 0.6610594510178767 1.311867451278401 0.4349672316506853 0.2993917158158626 0.16698974293874672 2.179536987124267 0.04193775389129771 0.07286913259058338 4.900470269412052e-08 7.309762241275423 0.6508080002605243 EDENDAS(ph)DDEDDDEKR ddPTM_A549_PD325901_60min_R1 2 EDENDASDDEDDDEKR 16 1 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 EDENDAS(1)DDEDDDEKR;EDENDAS(1)DDEDDDEKR 121.26 3.684e-08 11687500.0 1222.78 1655.5 1916.48 1496.63 1949.08 1243.26 1289.77 1246.25 1127.92 1562.69 1470.0 True False 1346.9157254369409 1795.0147949777559 2046.5438575304468 1589.0734360066567 1812.18334476097 1233.135302761539 1338.852903139225 1221.3925660857876 1080.5174448474575 1464.0214867096554 1289.199319097766 1.0447691877308523 1.392348544082369 1.5874534117522658 1.2326049296386186 1.4056657631724545 0.9565125302924742 1.0385150560552643 0.947403980123545 0.8381306356907227 1.1356052280063544 1.0 10.332259616200002 -7.269392919991691 22.265260903218152 0.9354075615377203 1.3444962529208353 0.5727153303912347 0.14533669465305202 58.005775821472 162382.61721847014 0.02008104994571836 0.03251314671853387 5.377830130036048e-08 7.269392919991691 0.409088691383115 EDENDAS(ph)DDEDDDEKRR ddPTM_A549_MK2206_60min_R1 4 EDENDASDDEDDDEKRR 17 2 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR 118.52 2.3472e-10 96404000.0 1094.79 1039.1 1208.76 839.03 1187.67 759.32 800.99 1167.54 865.03 1379.53 1171.02 True False 1279.5637869543173 1091.9857516450531 1380.1803439878995 1044.592387665488 1012.9653162969356 839.6707384041774 946.5195148175021 1333.042370441291 669.1020861690585 1067.8932148748052 880.2234154921537 1.4536806956434838 1.24057794012955 1.5679886716217475 1.186735514280124 1.1508047825909775 0.9539291089350284 1.0753173548425552 1.5144363885116094 0.7601502918380645 1.2132070064027107 1.0 9.781725940245066 -7.006029573509361 0.46689004795451056 0.90431679138726 1.479223597882408 0.14927819374081652 0.2175557023380228 0.9811355032385813 0.351729458947524 0.05520377298782878 0.2405188610664978 9.862123267016314e-08 7.006029573509361 0.574906806495148 EDENDAS(ph)DDEDDDEKRR ddPTM_A549_PD325901_60min_R1 4 EDENDASDDEDDDEKRR 17 2 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR 124.31 1.2397e-10 143628000.0 1696.23 1397.42 1558.14 1543.1200000000001 1697.83 1491.37 1212.49 1740.42 1691.62 1637.62 1815.82 True False 1868.430020901473 1515.1854876459163 1663.8847502569772 1638.4350177202045 1578.580277995525 1479.2247771821476 1258.631970449986 1705.7059577669236 1620.5270941670105 1534.2203937220222 1592.4856514313647 1.1732790303147052 0.9514594283998923 1.0448350029159994 1.0288538651808508 0.9912681326683596 0.9288779310837649 0.7903568671521135 1.0710965943296216 1.0176085999333442 0.9634123813567976 1.0 10.63706465827266 -5.252772799750062 23.973875262772445 0.9936326039378786 1.1732791956624635 0.3541679163948449 0.07304414109600746 555.4647065375146 1536488.4944897634 0.009803584710024559 0.1542140053291614 5.587624336866732e-06 5.252772799750062 0.17964659172458497 EDFDSTSSSSS(ph)TPPLQPR ddPTM_A549_MK2206_60min_R1 1 EDFDSTSSSSSTPPLQPR 18 0 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 EDFDSTS(0.005)S(0.047)S(0.047)S(0.036)S(0.432)T(0.432)PPLQPR 128.96 1.8795e-12 6301500.0 660.86 839.06 1099.8 802.56 1466.3 1183.8 1144.6 1271.1 1534.9 1274.2 1305.2 True False 772.3970115242468 881.764570084976 1255.7681775686588 999.1872360282874 1250.6092123958642 1309.0689302571577 1352.5590040576196 1451.2823175804904 1187.2476007316366 986.3573350296671 981.082818312547 0.7872903256554448 0.8987667031021932 1.279981826334058 1.0184535060423134 1.2747233862956646 1.3343103210274783 1.378638967894686 1.4792658585915122 1.2101400397304796 1.0053762196408578 1.0 9.938231116765246 -5.633096927302942 4.957932257612124 1.1757553823532998 0.8133994337375884 0.4511451080150809 0.15573838906139134 0.16221807869661903 6.200172979816383 0.024552062883531647 0.10213582950037141 2.327571724406827e-06 5.633096927302942 -0.3623559486157114 EDFDSTSSSSST(ph)PPLQPR ddPTM_A549_MK2206_60min_R1 1 EDFDSTSSSSSTPPLQPR 18 0 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 EDFDSTSSSS(0.005)S(0.444)T(0.55)PPLQPR 152.99 1.0784e-17 4286100.0 1151.6 1273.4 940.93 835.44 1262.7 1312.4 1193.0 1047.4 1801.6 1484.7 1571.9 True False 1345.9619260831685 1338.2106208688385 1074.3680226583724 1040.1228375043268 1076.9585026885757 1451.2772968993859 1409.752657557872 1195.8721575279728 1393.5404765640226 1149.305238831068 1181.5538477670034 1.1391456501342507 1.1325853860980588 0.9092840116333255 0.8803008339146248 0.9114764466502305 1.228278592331723 1.1931344984590735 1.0121182033201697 1.179413430202651 0.9727066108778017 1.0 10.206469664406496 -7.243947062315934 24.99171966775874 1.098651845253618 0.9911415189383018 0.17895423163278357 0.10978466465997828 1203.1459163477573 1718965.7258218147 0.017313373479728552 0.029939128931970947 5.702337758480527e-08 7.243947062315934 -0.10751032631531621 EDGGTVGVFS(ph)PK ddPTM_A549_PD325901_60min_R1 2 EDGGTVGVFSPK 12 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 EDGGTVGVFS(1)PK;EDGGTVGVFS(1)PK 167.22 3.2339e-15 32751000.0 13693.6 14331.2 14253.7 14439.0 18014.0 15396.0 15322.400000000001 15826.2 16532.0 15462.9 17111.2 True False 15083.764191304484 15538.940519350766 15221.04179646108 15330.864236651754 16748.75878492628 15270.62008052754 15905.502316739003 15510.534025586276 15837.217531578624 14486.569855084977 15006.630876833799 1.005139948806881 1.0354716289676127 1.0142877452898689 1.0216060062034633 1.1160905417339118 1.01759150377326 1.0598982841173776 1.0335786995021226 1.0553479766085956 0.9653445849360062 1.0 13.873312494891177 -3.6459830155387403 1.143593398046387 1.0341567559731197 0.00039984520107746416 0.039364499521685414 0.036382864961497445 148.43524435412215 6.532508087255566 0.00477954027877885 373.55414271174584 0.0002259524134340972 3.6459830155387403 -1.0337569107720423 EDGNEEDKENQGDET(ph)QGQQPPQR ddPTM_A549_PD325901_60min_R1 1 EDGNEEDKENQGDETQGQQPPQR 23 1 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 EDGNEEDKENQGDET(1)QGQQPPQR 40.104 0.038312 1737100.0 437.36 205.96 260.12 173.09 303.85 223.88 501.89 220.66 324.32 406.81 316.78 True False 481.76046523258486 223.31697201668288 277.7733074286295 183.78137618408826 282.50862422559413 222.05679550717747 520.9896985947461 216.2587631955787 310.6899582531805 381.12394717337105 277.81806823387086 1.734086153198044 0.8038245080182898 0.9998388844702365 0.6615170041042064 1.0168835526844666 0.79928853050784 1.8752909121669155 0.7784186412725657 1.1183216420309916 1.371847229362116 1.0 8.117996619561046 EDGNEEDKENQGDETQGQQPPQR ddPTM_A549_MK2206_60min_R1 2 EDGNEEDKENQGDETQGQQPPQR 23 1 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 109.75 1.5205e-10 9068300.0 1051.69 758.45 938.5 894.22 1029.3400000000001 1287.19 772.26 760.05 1410.9099999999999 1085.8 996.35 False True 1229.1895606481482 797.0518653981242 1071.5934121187365 1113.3039401430615 877.9254495584531 1423.3995914324298 912.5696457046461 867.7894150555045 1091.3411377602936 840.5170258791494 748.928797138911 1.6412635825247333 1.0642558657686216 1.4308348353174325 1.4865284181836131 1.1722415440724678 1.9005806651715893 1.2184998750093234 1.1587075011278372 1.4572027967538175 1.1222923048093858 1.0 9.54868475372234 -10.95207500819552 0.6784570354372992 0.9300255081035209 1.3934561959944434 0.2287924256071452 0.2312226985730722 1.1302304934676086 0.6854104069471079 0.32352965298998154 0.042294147311682795 1.1166703679113595e-11 10.95207500819552 0.46343068789092245 EDGNEEDKENQGDETQGQQPPQR ddPTM_A549_PD325901_60min_R1 2 EDGNEEDKENQGDETQGQQPPQR 23 1 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 134.29 3.4907999999999996e-22 11864100.0 1431.25 1357.33 1054.1 1115.02 1554.1 929.23 1155.52 1501.6 1319.52 1229.45 1245.6799999999998 False True 1576.5494463694383 1471.71696265005 1125.637564818231 1183.8922530058478 1444.9453773539428 921.6626589652248 1199.493945924806 1471.6494100175887 1264.0651631544051 1151.822317180751 1092.469257016126 1.4431064638610391 1.3471472567290064 1.030360861497099 1.0836847310828925 1.3226416835751873 0.843650888156407 1.0979658587382108 1.3470854219157817 1.1570716109732562 1.0543292726851983 1.0 10.09337696633356 -5.650956592901184 4.662978998389796 1.0951562223358737 1.420099630080328 0.41449115395544756 0.13449904527956744 0.1415367467346776 5.012121692186697 0.018633146552833428 0.07827225434116553 2.233795476266945e-06 5.650956592901184 0.3249434077444542 EDGNEEDKENQGDETQGQQPPQRR ddPTM_A549_MK2206_60min_R1 2 EDGNEEDKENQGDETQGQQPPQRR 24 2 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 98.70299999999999 1.4242e-08 23482000.0 1271.41 1118.64 912.1700000000001 973.27 1954.27 1322.0500000000002 849.28 987.24 1522.5500000000002 1865.77 2105.6099999999997 False True 1485.9929250099012 1175.5739979022444 1041.5294221974946 1211.72119369175 1666.7994718058148 1461.948453494235 1003.5831827416182 1127.1842932956995 1177.6948560127398 1444.2912611664578 1582.7289251203506 0.9388802475426463 0.7427513197263731 0.6580592580743394 0.7655898457783039 1.0531174639896541 0.9236884663512854 0.6340840600138181 0.712177730125194 0.7440913205798574 0.9125322967460356 1.0 10.628198470097525 -10.791298723308582 1.0586705513265484 0.9990351139268371 0.7921583179885946 0.1875085726243676 0.12362463196327503 0.568685373834511 1.1399300549393518 0.08611703257008507 0.022028844573282386 1.6169674468893637e-11 10.791298723308582 -0.20687679593824249 EDGNEEDKENQGDETQGQQPPQRR ddPTM_A549_PD325901_60min_R1 2 EDGNEEDKENQGDETQGQQPPQRR 24 2 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 82.50399999999999 4.0098e-06 20296700.0 776.36 736.4 747.04 1066.0 1018.0 951.1800000000001 1026.42 858.51 767.41 837.46 782.53 False True 855.1754956739752 798.4590123960247 797.7386267164524 1131.8443989383454 946.499191909346 943.4339054427245 1065.4809747785748 841.3863445619335 735.1584264401615 784.5826326781819 686.2837708663776 1.2460960494437825 1.163453146193498 1.1624034555113725 1.6492367253701536 1.3791659253641793 1.3746994253582825 1.5525370408125658 1.2260035575367774 1.071216394221422 1.1432335514618246 1.0 9.422661428227991 -8.657592677491158 3.1216161470709665 1.0315728454015887 1.3597349301108643 0.42906640068868307 0.1441681225186494 0.1505910198676865 2.916067261215106 0.025576008319702047 0.028770214210304245 2.199922200964153e-09 8.657592677491158 0.32816208470927566 EDGSEVGVGGAQVT(ph)GSNTR ddPTM_A549_MK2206_60min_R1 1 EDGSEVGVGGAQVTGSNTR 19 0 H7C399;A0A087WTG3;Q13618-3;Q13618-2;Q13618 H7C399 CUL3 Cullin-3 1 EDGSEVGVGGAQVT(0.509)GS(0.369)NT(0.122)R 69.52199999999999 0.0013111 1730100.0 746.4 709.48 875.25 728.58 1102.7 634.69 601.84 794.11 1284.2 803.22 1237.5 True False 872.3740722720362 745.5895015659052 999.3736110356151 907.0821327071993 940.4942907378571 701.852474526876 711.186537656857 906.6775243598794 993.3307504460024 621.7720441394824 930.194596737494 0.9378403995591311 0.8015414238923112 1.0743704753185572 0.9751530872020137 1.011072622907602 0.7545222010410609 0.7645567283998724 0.974718115478098 1.0678741350787762 0.6684322251712133 1.0 9.86138874941508 -8.518889959984891 23.849407118302015 1.0314856099029135 0.9040394832878439 0.0 0.1455735752074194 96.92107275659787 579505.3221190845 0.01685230720810372 0.019340056362617545 3.0276804739983428e-09 8.518889959984891 -0.1274461266150696 EDGSEVGVGGAQVT(ph)GSNTR ddPTM_A549_PD325901_60min_R1 1 EDGSEVGVGGAQVTGSNTR 19 0 H7C399;A0A087WTG3;Q13618-3;Q13618-2;Q13618 H7C399 CUL3 Cullin-3 1 EDGSEVGVGGAQVT(0.604)GS(0.386)NT(0.011)R 118.24 5.2238e-14 1334200.0 754.17 556.76 512.3 751.36 981.8 734.1 866.45 1018.4 894.03 792.0 768.38 True False 830.7327832093895 603.6801191493901 547.0677587101603 797.7698007376308 912.841755026126 728.1217329900791 899.4232288896332 998.0872130806554 856.4570281730723 741.9929848364347 673.8741311621372 1.232771440234306 0.895835128896114 0.8118248399989898 1.1838558031035082 1.3546175952056125 1.0805010896239458 1.3347050840763433 1.481118159795499 1.2709451046830655 1.1010854260822007 1.0 9.396335334140007 -6.304782069819308 19.798335345751592 1.1862922882628675 0.9717133813418004 0.285981929760162 0.16434002422324895 49.00433061629357 22384.333277618476 0.026280961674926374 0.061074000293160666 4.956988714796599e-07 6.304782069819308 -0.21457890692106707 EDGSEVGVGGAQVTGS(ph)NTR ddPTM_A549_MK2206_60min_R1 1 EDGSEVGVGGAQVTGSNTR 19 0 H7C399;A0A087WTG3;Q13618-3;Q13618-2;Q13618 H7C399 CUL3 Cullin-3 1 EDGSEVGVGGAQVT(0.34)GS(0.433)NT(0.227)R 57.173 0.0067203 1619100.0 687.8 508.27 701.12 724.02 1070.6 802.41 480.84 1201.8 998.59 1296.1 1318.3 True False 803.8838249044841 534.1387720033017 800.5493586624284 901.4049325024934 913.1161582152438 887.32049360335 568.2024039062259 1372.1588303581411 772.4109594205521 1003.3101098194556 990.9297267709409 0.8112420116046296 0.539027902355755 0.8078770240056387 0.9096557587790061 0.9214741808087021 0.8954424008398522 0.5734033287686092 1.3847186064641328 0.7794810656629937 1.0124937043607094 1.0 9.952638939987859 -5.986764613258267 5.5641913288557765 0.9069109736536349 0.6723510198346752 0.2047826084437666 0.1938205828403088 0.19222830412609293 19.69911046969674 0.025064658340008972 0.07698774019582771 1.0309447390322096e-06 5.986764613258267 -0.23455995381895978 EDGSEVGVGGAQVTGS(ph)NTR ddPTM_A549_PD325901_60min_R1 1 EDGSEVGVGGAQVTGSNTR 19 0 H7C399;A0A087WTG3;Q13618-3;Q13618-2;Q13618 H7C399 CUL3 Cullin-3 1 EDGSEVGVGGAQVT(0.204)GS(0.519)NT(0.278)R 84.035 0.00011522 2638800.0 505.69 563.61 594.75 748.9 824.98 871.44 654.75 495.36 860.25 876.15 577.05 True False 557.0272765306977 611.1073926894674 635.113311522288 795.157852124697 767.036250826495 864.3432815650108 679.666869542948 485.47965619759736 824.0966840999587 820.8297394753059 506.07650822133746 1.100677995286587 1.2075395375242228 1.2549748925403883 1.5712206340487296 1.5156527488745324 1.7079300610155608 1.343012091060526 0.959300912630523 1.6284033554458766 1.6219479192191788 1.0 8.983211696606684 -11.065608532658324 1.3645192831219806 0.9990725953693554 1.3974871110950269 0.0 0.28559170878406515 0.46585712131357454 1.5417821801046354 0.17032561752400296 0.037314924710511795 8.5978817408921e-12 11.065608532658324 0.39841451572567144 EDGTGESAGGS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 EDGTGESAGGSPAR 14 0 A0A3B3IRY9;O15079;O15079-2 A0A3B3IRY9 SNPH Syntaphilin 1 EDGTGES(0.005)AGGS(0.994)PAR;EDGTGES(0.001)AGGS(0.999)PAR 110.29 1.1452e-05 3205200.0 323.62 563.82 572.56 381.69 575.3 504.03999999999996 187.466 552.14 817.07 771.49 887.02 True False 378.23914425063816 592.5160297300685 653.757617520196 475.204067134715 490.67413209530184 557.3771782453265 221.52614560079144 630.407535857833 632.0049495926763 597.2098731769249 666.7484534934077 0.5672891212103545 0.8886650229567076 0.9805161363252564 0.7127186642052158 0.7359209151883743 0.8359632112005152 0.33224845808057313 0.9454953101950703 0.9478911368767428 0.8957049244701842 1.0 9.380998763259244 -8.48808549206596 24.982858646237403 0.9738826065579905 0.7354104347142697 0.301074598592154 0.1630570429614582 518.1612646645701 372059.88558918977 0.02574532685778191 0.03111696175273553 3.250233093531099e-09 8.48808549206596 -0.23847217184372083 EDGTGESAGGS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 EDGTGESAGGSPAR 14 0 A0A3B3IRY9;O15079;O15079-2 A0A3B3IRY9 SNPH Syntaphilin 1 EDGTGES(0.006)AGGS(0.994)PAR;EDGT(0.025)GES(0.153)AGGS(0.822)PAR 73.46600000000001 0.0009904999999999998 4659100.0 958.1500000000001 784.0899999999999 618.63 780.64 688.12 990.82 694.07 1015.4399999999999 870.11 1002.1200000000001 1004.8199999999999 True False 1055.42068264725 850.1680160640939 660.6139519243932 828.8583598379269 639.7888250851269 982.751090425324 720.4832136596773 995.18625260273 833.542302589032 938.8459721771311 881.2335100787865 1.197662901576326 0.9647477159465767 0.7496468806154808 0.9405660932751218 0.7260150888133233 1.1151994099015383 0.8175849027748192 1.1293104962766969 0.945881305074871 1.0653770668493914 1.0 9.783380546258465 -8.236766320550073 24.98574224669192 0.9853448996810013 0.9242478702611957 0.07410738200655653 0.14244199033703916 2176.6329249118194 2204221.233536861 0.021242648046380746 0.027417340775885805 5.797405516737474e-09 8.236766320550073 -0.06109702941980555 EDGVLGSRS(ph)PR ddPTM_A549_MK2206_60min_R1 4 EDGVLGSRSPR 11 1 E7EUR8;A0A1B0GVL4;P78312-4;P78312-6;P78312-2;P78312-5;P78312;D6RFZ4;P78312-3 E7EUR8 FAM193A Protein FAM193A 1 EDGVLGS(0.016)RS(0.984)PR;EDGVLGS(0.025)RS(0.975)PR;EDGVLGS(0.017)RS(0.983)PR;EDGVLGS(0.017)RS(0.983)PR 92.45700000000001 8.1776e-05 46338700.0 3279.7 3325.37 2888.84 2900.4 3580.1000000000004 2481.21 2384.0299999999997 2396.66 3820.08 4630.21 4680.33 True False 3833.233179033492 3494.617129196332 3298.5209511615258 3610.998130203903 3053.4720325297912 2743.7699953061015 2817.177391615839 2736.3938944634233 2954.8379794142384 3584.2423451794953 3518.0748904633497 1.0895825979783604 0.9933322166248916 0.9375925907953291 1.0264130931358073 0.8679383263861198 0.7799066480204269 0.8007724335978537 0.7778100181667893 0.839901955306321 1.0188078584954259 1.0 11.780570478941572 -5.605012822156839 0.9315564424698562 0.8918332395769238 1.1202026048854141 0.36466427114561606 0.08500442161171456 1.3763822709494096 1.2514440546473748 0.015035364702689943 0.2792578917599833 2.4830597940898135e-06 5.605012822156839 0.22836936530849028 EDGVLGSRS(ph)PR ddPTM_A549_PD325901_60min_R1 4 EDGVLGSRSPR 11 1 E7EUR8;A0A1B0GVL4;P78312-4;P78312-6;P78312-2;P78312-5;P78312;D6RFZ4;P78312-3 E7EUR8 FAM193A Protein FAM193A 1 EDGVLGS(0.005)RS(0.995)PR;EDGVLGS(0.004)RS(0.996)PR;EDGVLGS(0.006)RS(0.994)PR;EDGVLGS(0.004)RS(0.996)PR 106.14 4.5316000000000005e-05 62225800.0 6474.38 6174.45 5620.48 6139.09 7530.28 5348.06 6040.42 6234.02 6774.93 6595.709999999999 7134.78 True False 7131.654291413359 6694.792570734159 6001.919571491865 6518.287646415016 7001.379110855707 5304.507172503641 6270.291488544651 6109.677580605915 6490.2032525537115 6179.2557449690885 6257.247291096843 1.1397430786474863 1.0699261607032664 0.9591948811151715 1.041718081957476 1.1189231918031521 0.8477381387900694 1.0020846542962059 0.976416193315406 1.0372297834206314 0.9875358056826802 1.0 12.611312406213987 -5.498202964482717 4.061161497105701 1.0082230530199843 1.1308286265091692 0.3126637082005461 0.0633808576256826 0.1947531566657609 6.970747566936329 0.008210870398228959 0.048116060055610255 3.175389727691054e-06 5.498202964482717 0.12260557348918488 EDHS(ph)LEHR ddPTM_A549_MK2206_60min_R1 2 EDHSLEHR 8 0 H3BU36;H3BSM5;P60520 H3BU36 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 1 EDHS(1)LEHR;EDHS(1)LEHR 67.113 0.002509 7193600.0 853.45 382.49 161.048 0.0 366.6 182.0 228.19 273.92 346.71500000000003 541.04 552.8199999999999 True False 997.4914951508171 401.9571072531195 183.88702806062693 0.0 312.6736256320833 201.25911919817761 269.64916926079707 312.74899884481795 268.1846060900837 418.81868823140076 415.53953694417896 2.4004731354475517 0.9673137487928518 0.4425259493065498 0.0 0.7524521684060258 0.48433205821571085 0.6489133891897754 0.7526335547869437 0.6453889034537524 1.0078913099613487 1.0 8.698841940030656 -5.2760723432605365 3.561617072547682 0.7079727911681813 2.572503819427559 0.7731599419045614 0.2718276292343582 0.1036290099628052 2.337138842133029 0.04092744462680029 0.5038038790211393 5.295752217500296e-06 5.2760723432605365 1.8645310282593774 EDHS(ph)LEHR ddPTM_A549_PD325901_60min_R1 1 EDHSLEHR 8 0 H3BU36;H3BSM5;P60520 H3BU36 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 1 EDHS(1)LEHR 51.092 0.0092016 3183500.0 317.72 131.9 272.64 97.124 270.75 170.92 158.59 0.0 232.01 220.24 323.1 True False 349.9747005068982 143.01567590309023 291.14298991750576 103.12312889539191 251.73345403679303 169.5280841883454 164.6252292337779 0.0 222.25942653650833 206.33400881360654 283.36074829965185 1.2350853200627583 0.5047123737542232 1.0274640777332513 0.3639287710602034 0.8883850552603243 0.5982765263206841 0.580974006532789 0.0 0.7843691402927503 0.7281672216485322 1.0 8.146496116854276 -9.432475397996956 2.073639841151056 0.9343758126015141 0.6461009120571534 0.04615643753847121 0.32157151464861317 0.4069127395345307 3.544787146907541 0.06510427083465345 0.055591362590903956 3.6942357094790197e-10 9.432475397996956 -0.2882749005443608 EDIFYTSK ddPTM_A549_MK2206_60min_R1 2 EDIFYTSK 8 0 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 134.91 0.0029958000000000003 27711000.0 19828.0 19617.9 18991.0 18402.1 28331.0 21216.0 21964.7 20469.3 30478.0 29165.0 29237.0 False True 23174.481651942588 20616.367315174175 21684.209365526825 22910.615326101655 24163.547429848768 23461.06303795899 25955.401674318033 23370.885959602165 23574.78166336493 22576.606244027807 21976.645999849792 1.0545049345610327 0.938103444689198 0.98669330004565 1.0424982650336292 1.0995102451035488 1.0675452040370192 1.1810447178561931 1.0634418900755784 1.0727197254542873 1.0272999002751428 1.0 14.423683603479654 -6.31259697342548 4.710146938153575 1.0553338896917566 0.9873722489893942 0.27631085688340684 0.05144250531904935 0.2514707902221519 12.330665405329576 0.008185738003749051 0.01999400985816599 4.868588025382883e-07 6.31259697342548 -0.06796164070236232 EDIFYTSK ddPTM_A549_PD325901_60min_R1 2 EDIFYTSK 8 0 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 140.5 0.0029865 45653000.0 29374.0 30479.0 30481.0 29533.0 37244.0 33043.0 33668.0 33863.0 36358.0 35649.0 35228.0 False True 32356.026856004115 33047.5722960598 32549.623957143092 31357.186335690556 34628.109924824836 32773.908763371735 34949.2541638365 33187.575899990414 34829.99969835081 33398.116056103616 30895.179328691203 1.0472839957253874 1.0696675990927085 1.053550251670346 1.0149540160322132 1.120825665273514 1.0608097921909723 1.1312203043722238 1.0741991670257225 1.1273603343679408 1.0810138274578012 1.0 14.915094127027025 -6.732455786453768 24.999684653848398 1.0715361923283537 1.0485418588182127 0.13542790531224336 0.03818435585480169 652.3856493735307 562709.6838440873 0.00742547526796466 0.015455226589390166 1.8515873863019844e-07 6.732455786453768 -0.02299433351014102 EDILENEDEQNS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 EDILENEDEQNSPPK 15 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 EDILENEDEQNS(1)PPK;EDILENEDEQNS(1)PPK 104.17 5.7638e-06 2341860.0 1152.28 1503.87 1296.4 1404.59 1361.43 1427.4299999999998 1362.59 1739.29 1978.23 1625.6200000000001 1548.04 True False 1346.7566934587649 1580.4105594518771 1480.249013820703 1748.714613054442 1161.1654504754154 1578.4796951486512 1610.1549653493564 1985.839683852232 1530.1640635841718 1258.3913129578775 1163.6189442695036 1.1573863592468678 1.358185656253669 1.2721080394148907 1.5028241175226393 0.997891497206907 1.3565262949028292 1.3837476377287576 1.7066065258149452 1.3150044274543655 1.081446223572675 1.0 10.184402974165149 -10.335561221318388 0.9793717370500193 1.0208040694432992 1.3390558021656647 0.30292680562435415 0.17218788103969107 0.4266810888819028 0.7967176976114083 0.07986391677237899 0.03172553320129067 4.617838908807846e-11 10.335561221318388 0.3182517327223655 EDILENEDEQNS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 EDILENEDEQNSPPK 15 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 EDILENEDEQNS(1)PPK;EDILENEDEQNS(1)PPK 92.935 2.5827e-05 1504000.0 824.92 1123.6100000000001 872.49 962.72 868.92 702.26 874.3299999999999 1081.08 915.69 894.8199999999999 1118.01 True False 908.6652711259931 1218.3005580096383 931.702418108585 1022.1850279042429 807.8900568112659 696.5410273935607 907.6031066017346 1059.5170113091467 877.2067336977518 838.320912489063 980.5018576493145 0.92673487973236 1.2425275367967479 0.9502301406570276 1.0425120767796003 0.8239556615916328 0.710392358728896 0.9256515931317564 1.0805864395293097 0.8946507616016092 0.8549916616158989 1.0 9.937376553510777 -6.178309264145707 2.2348729861525745 0.9337018072933253 1.0782848861282637 0.18646796015055533 0.12168304431135461 0.4052044761115486 3.8870352691743726 0.01707514603230517 0.05687956254486563 6.632705825584268e-07 6.178309264145707 0.14458307883493837 EDILENEDEQNS(ph)PPKK ddPTM_A549_MK2206_60min_R1 2 EDILENEDEQNSPPKK 16 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 EDILENEDEQNS(1)PPKK;EDILENEDEQNS(1)PPKK 118.52 5.3937e-08 7204200.0 2363.4 3231.8 2531.92 2642.1 3221.2 3029.2 2611.9 3399.6000000000004 3746.6000000000004 3271.1 4013.6000000000004 True False 2762.2841404176456 3396.284815866118 2890.984328195709 3289.414618608376 2747.3657470978383 3349.7479333797787 3086.4484210187834 3881.503710838356 2898.0010820907887 2532.1562381223844 3016.9123502752386 0.9155997323441091 1.1257485871461492 0.9582593037321615 1.0903248873996212 0.9106548113163416 1.1103232525380378 1.0230487540472302 1.2865815311088633 0.9605851100799792 0.839320452213791 1.0 11.55885706743768 EDILENEDEQNS(ph)PPKK ddPTM_A549_PD325901_60min_R1 2 EDILENEDEQNSPPKK 16 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 EDILENEDEQNS(1)PPKK;EDILENEDEQNS(1)PPKK 183.54 2.09e-34 17818600.0 8223.0 9616.8 10315.3 9839.4 11595.599999999999 10714.9 9915.7 9564.6 10411.0 10933.5 11573.5 True False 9057.792906547342 10427.241486162531 11015.358288937967 10447.157391101271 10781.165058648341 10627.641406913772 10293.047389579237 9373.82654971646 9973.461875227746 10243.15694407722 10150.032870461218 0.892390499828574 1.027311105218984 1.0852534597198233 1.0292732569866596 1.0621803097824296 1.0470548758361657 1.0140900547755092 0.9235267185189433 0.9826038991708753 1.009174755865768 1.0 13.309196779075625 -8.011449275056844 24.608672322444104 0.9855968363313125 1.0289814037120237 0.14167432959757353 0.050344575186903925 678.8539093366519 1459109.0887907732 0.007764549788458645 0.010334666796138852 9.739815382661228e-09 8.011449275056844 0.04338456738071128 EDKNGHDGDTHQEDDGEKS(ph)D ddPTM_A549_MK2206_60min_R1 4 EDKNGHDGDTHQEDDGEKSD 20 2 K7EQH5;Q08117;Q08117-2 K7EQH5 AES Amino-terminal enhancer of split 1 EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D 278.97 2.979199999999999e-127 462987000.0 16812.0 19951.2 21774.800000000003 18883.8 25514.800000000003 17959.4 16340.0 18441.5 29683.9 32991.4 32456.1 True False 19649.45458606306 20966.63086153477 24862.79406521373 23510.331847725993 21761.606719251184 19859.85178751512 19308.766491614126 21055.63909972513 22960.544045447798 25538.61982647758 24396.354627209537 0.8054258468659821 0.8594165473455794 1.0191192268325189 0.9636821651012011 0.8920023934633338 0.8140499714397985 0.7914611337088384 0.8630649710363503 0.9411465112840931 1.0468211426142355 1.0 14.57437797183979 -9.12842788598669 1.8443150200212157 0.9801441530951263 0.879568350116654 0.37890102232149525 0.06797805194314817 0.30398907488846905 2.1282715464333024 0.014748775144248489 0.013950116070907119 7.439985926147375e-10 9.12842788598669 -0.10057580297847224 EDKNGHDGDTHQEDDGEKS(ph)D ddPTM_A549_PD325901_60min_R1 5 EDKNGHDGDTHQEDDGEKSD 20 2 K7EQH5;Q08117;Q08117-2 K7EQH5 AES Amino-terminal enhancer of split 1 EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D 267.5 7.311599999999999e-112 744447600.0 32287.96 32283.379999999997 33159.96 33160.14 41072.840000000004 38666.05 37705.6 39317.67 41250.1 38766.4 42877.19 True False 35565.809930060124 35004.013731131956 35410.394292638244 35208.36653565792 38188.02541200576 38351.16650848801 39140.50724129602 38533.44822773458 39516.50174808682 36318.68288808477 37603.56745090174 0.9458094627989145 0.9308694920192353 0.9416764603218277 0.9363038914227703 1.0155426200417588 1.0198810673631535 1.040872180343023 1.0247285255061762 1.050871085560772 0.9658307801648176 1.0 15.198581916441219 -6.792897202444245 4.839317317602945 1.0254333455770923 0.9378627977605528 0.7408512033242977 0.021905594650980825 0.056486477318318566 3.15610491485242 0.0027132990771580475 0.005377760035934433 1.6110269203158907e-07 6.792897202444245 -0.0875705478165395 EDKPIQCT(ph)PQK ddPTM_A549_PD325901_60min_R1 2 EDKPIQCTPQK 11 1 Q5VYS8-4;Q5VYS8-6;Q5VYS8;A0A0C4DFW3;X6R3Q3 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 EDKPIQCT(1)PQK;EDKPIQCT(1)PQK 78.932 0.00039939 38796000.0 8189.4 9035.8 9569.2 8374.400000000001 8983.8 8321.3 9906.8 10165.2 8109.9 7677.200000000001 9982.5 True False 9020.781859282355 9797.278577142863 10218.623456274197 8891.667668357666 8352.808880427481 8253.53409171822 10283.808695208976 9962.447111554866 7769.069105936933 7192.460281800854 8754.715784281258 1.0303911722044488 1.1190858525337264 1.1672136147036696 1.0156432130352306 0.9540925241027945 0.9427529453939683 1.174659343444723 1.137952088569459 0.8874153424701674 0.821552687605762 1.0 13.095844627996685 -8.764903625336368 24.99997398366283 0.9468350235089725 1.0666273250234668 0.38991807496081976 0.08717898541065815 86.00801433028272 620682.3419481178 0.015209185228024752 0.016512715180597742 1.7182896519935886e-09 8.764903625336368 0.11979230151449427 EDKPKPVRDEYEYVS(ph)DDGELK ddPTM_A549_PD325901_60min_R1 1 EDKPKPVRDEYEYVSDDGELK 21 3 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 EDKPKPVRDEYEY(0.001)VS(0.999)DDGELK 115.95 2.4739000000000002e-15 9059700.0 1465.5 1271.3 1933.5 1304.2 1750.5 1596.2 1369.1 1802.3 1931.9 1338.8 1673.4 True False 1614.2764811559198 1378.4369126277372 2064.718937080023 1384.7574719468942 1627.5509188971619 1583.2010764184229 1421.2018497002675 1766.3517126230013 1850.7089613632186 1254.2679395189623 1467.5824085565998 1.0999562762159276 0.939256906181821 1.4068844959178273 0.9435636894209124 1.1090013817335782 1.078781721004367 0.9683966238720805 1.20357923502248 1.2610596519642343 0.8546490692489036 1.0 10.519225801338381 -8.301615488795397 24.961607434896933 1.1327452691096775 1.0813464173861385 0.0 0.15824743683552703 1866.9647003397886 1159949.205448807 0.023982512125254502 0.02899349063346749 4.9932638029324936e-09 8.301615488795397 -0.051398851723539085 EDKS(ph)LSEAPEDTSTR ddPTM_A549_MK2206_60min_R1 2 EDKSLSEAPEDTSTR 15 1 Q5SY38;P41214 Q5SY38 EIF2D Eukaryotic translation initiation factor 2D 1 EDKS(0.902)LS(0.096)EAPEDT(0.001)S(0.001)T(0.001)R;EDKS(0.994)LS(0.006)EAPEDTSTR 73.783 0.00021311 14255100.0 2623.0 3138.4 2759.1000000000004 2666.4 4460.6 3101.2 2579.8 3183.1 4424.7 3784.8999999999996 3960.9 True False 3065.69827380701 3298.1311548097715 3150.381868275768 3319.6681196992454 3804.4516489210923 3429.366925590047 3048.516266527913 3634.3141728349124 3422.512514793975 2929.8884612727866 2977.2992147212444 1.0296910228735752 1.1077593876027558 1.05813411453532 1.1149931129814428 1.2778197200032821 1.1518381856393725 1.0239200183355897 1.2206748165804298 1.1495359612736855 0.9840759191370368 1.0 11.539788502510241 -10.725317534302649 0.9865886879522754 1.0001721663260323 1.1285601562370753 0.3275297033070732 0.07313820136605935 0.5592267970520637 0.9697749821707298 0.04984205515213282 0.012982308379266163 1.8822723632833973e-11 10.725317534302649 0.12838798991104294 EDKSDQS(ph)DDEKIQNSDDEER ddPTM_A549_MK2206_60min_R1 1 EDKSDQSDDEKIQNSDDEER 20 2 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 EDKS(0.002)DQS(0.968)DDEKIQNS(0.03)DDEER 74.074 8.2724e-05 10119000.0 1437.2 1496.1 1578.8 1524.4 1700.8 1412.5 1615.8 1626.7 2002.4 2296.9 2460.2 True False 1679.7642238335613 1572.2450996402306 1802.697580237678 1897.8780684329167 1450.6145730361359 1561.9698124583847 1909.3699447460265 1857.289706559817 1548.859597175732 1778.0286947336704 1849.2644419342096 0.9083418172885204 0.8502002547541363 0.9748187113532418 1.0262880880615757 0.7844278731271597 0.8446438362404602 1.0325023838932146 1.0043397063414108 0.8375544146383554 0.9614788747432838 1.0 10.852735827299375 EDKSPS(ph)EESAPTTSPESVSGSVPSSGSSGR ddPTM_A549_MK2206_60min_R1 2 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKS(0.398)PS(0.6)EES(0.002)APTTSPESVSGSVPSSGSSGR;EDKS(0.394)PS(0.58)EES(0.027)APTTSPESVSGSVPSSGSSGR 172.58 6.8488e-58 239100000.0 1990.19 2489.4 2759.3 1976.94 2705.5 2313.6099999999997 2078.54 2482.3 3278.0 2554.3 2833.5 True False 2326.085416526105 2616.0998269129022 3150.6102312831445 2461.290388748208 2307.524533954179 2558.434674549975 2456.183812942448 2834.1736267249244 2535.5382338903546 1977.2818559616046 2129.8637493783344 1.0921287416648335 1.2282944520167032 1.4792543570933803 1.1556093151341773 1.0834141548386371 1.2012198786409376 1.1532117083355027 1.3306830671925207 1.1904696883218133 0.9283607256749332 1.0 11.05654542667027 -10.382422592166371 0.6683438506451254 0.9916657121154563 1.2184972459087973 0.4205221310705777 0.10947944206944765 0.698966468314893 0.5479847339910314 0.08482297806611076 0.02290651238626837 4.145504661507439e-11 10.382422592166371 0.22683153379334098 EDKSPS(ph)EESAPTTSPESVSGSVPSSGSSGR ddPTM_A549_PD325901_60min_R1 2 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKS(0.264)PS(0.736)EESAPTTSPESVSGSVPSSGSSGR;EDKS(0.369)PS(0.63)EESAPTTSPESVSGSVPSSGSSGR 282.06 2.1014999999999992e-168 246980000.0 5372.799999999999 7277.3 6910.1 6498.7 9439.3 6517.6 6922.2 6015.4 6381.7 6946.7 6093.0 True False 5918.24270075369 7890.5836106865745 7379.060939806906 6900.10993938145 8776.316131817177 6464.52282650339 7185.6281089731865 5895.418128009989 6113.499341959548 6508.08417646876 5343.599626709309 1.107538572158756 1.47664199451742 1.3809157600288018 1.2912849804263256 1.6423977739555689 1.2097693087242705 1.3447167847412689 1.1032671868869977 1.144078854898109 1.2179213696959859 1.0 12.383596201493583 -8.419291875200264 0.9074497512919082 1.0489978906238862 1.3768417975845917 0.34836847110726077 0.14373842099782824 0.29065548922892426 0.4722179629310127 0.02742232370635121 0.033838152488740066 3.80809807483792e-09 8.419291875200264 0.32784390696070553 EDKSPSEESAPTT(ph)SPESVSGSVPSSGSSGR ddPTM_A549_PD325901_60min_R1 1 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKSPSEESAPT(0.005)T(0.647)S(0.331)PES(0.016)VS(0.001)GSVPSSGSSGR 140.49 6.1851e-30 23353000.0 1830.4 1404.1 1626.3 1952.4 1780.3 1736.3 1589.1 1485.2 1503.9 1968.3 1856.5 True False 2016.220860530739 1522.4284346893787 1736.670497736354 2072.995313777885 1655.2578697015801 1722.1601484684302 1649.574070088885 1455.5765208831397 1440.6963129531266 1844.02120208782 1628.1622693231302 1.23834147155918 0.9350594000205472 1.0666446032177945 1.273211738679882 1.0166418304176243 1.0577325005721803 1.0131509009692605 0.8939996634907041 0.8848603975769945 1.132578267431801 1.0 10.669028776331015 -7.738650472842149 1.7079882401950335 0.9408152418200253 1.102627429237068 0.19385637338672956 0.10899752833625445 0.28502589317832205 1.6995838256501223 0.015475832110758736 0.02418763830083743 1.8253641936590413e-08 7.738650472842149 0.16181218741704262 EDKSPSEESAPTTS(ph)PESVSGSVPSSGSSGR ddPTM_A549_MK2206_60min_R1 2 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKSPSEESAPT(0.039)T(0.214)S(0.721)PES(0.024)VS(0.001)GSVPSSGSSGR;EDKSPSEESAPT(0.002)T(0.201)S(0.796)PESVSGSVPSSGSSGR 132.99 4.557499999999999e-28 44568000.0 1744.54 1830.98 1688.3200000000002 1535.22 2166.2 1525.81 1434.25 1374.23 2684.4 2306.7 2509.3 True False 2038.9757020919858 1924.169061252102 1927.7491630775771 1911.3489689186454 1847.5548495477888 1687.2702014492925 1694.834659767292 1569.0313109028696 2076.3876861059393 1785.6148679272726 1886.171556843146 1.0810128562772867 1.0201453066509771 1.022043385228446 1.0133484210299717 0.9795264077887011 0.8945475798994915 0.898558062557103 0.831860339114079 1.1008477349648698 0.9466874110411391 1.0 10.881245187054002 EDKSPSEESAPTTS(ph)PESVSGSVPSSGSSGR ddPTM_A549_PD325901_60min_R1 1 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 A0A494C0B4;P54725-2;P54725-3;P54725 A0A494C0B4 RAD23A UV excision repair protein RAD23 homolog A 1 EDKSPSEESAPT(0.009)T(0.399)S(0.591)PES(0.001)VSGSVPSSGSSGR 160.35 1.4538e-46 25147000.0 1954.6 2042.8 2212.0 1884.2 2352.9 1987.5 2741.6 2446.7 2156.0 2409.3 2045.2 True False 2153.0295530995304 2214.9539252072236 2362.1196218365717 2000.5827546713217 2187.6404210643427 1971.3144589535248 2845.9330882610857 2397.898649100982 2065.3908176919617 2257.1763868262888 1793.653365590986 1.200359888037862 1.2348840459914754 1.316932060090821 1.1153675470690265 1.2196561849861904 1.0990498480758581 1.5866683846816674 1.3368796307590374 1.1514994241997487 1.2584239687151468 1.0 10.808685392275855 -9.423625978488262 1.374906862329585 1.0394880249147544 1.2591794778223686 0.050832849014988524 0.14311029208676 0.3028332954055434 1.1801392575837701 0.031199796039994884 0.02535198295840293 3.7702836219699685e-10 9.423625978488262 0.21969145290761416 EDLFIVSK ddPTM_A549_MK2206_60min_R1 2 EDLFIVSK 8 0 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 134.91 0.0029958000000000003 13032400.0 6308.9 6814.6 5873.7 5614.5 8023.6 6538.5 5946.5 6143.6 8714.6 8502.9 7989.099999999999 False True 7373.688082203976 7161.434032490022 6706.678982164972 6990.052752044486 6843.339068798651 7230.399730094969 7026.902077257245 7014.47411398592 6740.757014356585 6582.088984479477 6005.18598205698 1.2278867139562324 1.1925415888679918 1.1168145336720623 1.1640027091467624 1.139571545202098 1.2040259455242237 1.1701389596014298 1.1680694211544176 1.1224893008305543 1.0960674663776007 1.0 12.551993211897969 -10.025176337078749 0.5049190463449196 0.9891735068463526 1.1768705623774718 0.550785830663425 0.03984976910418721 0.3098051496569832 0.15003678092217582 0.026061659011420858 0.00826962573257875 9.436776359916132e-11 10.025176337078749 0.18769705553111915 EDLFIVSK ddPTM_A549_PD325901_60min_R1 2 EDLFIVSK 8 0 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 134.91 0.0029958000000000003 27054000.0 11236.3 11035.1 11637.8 12304.400000000001 13654.400000000001 11626.6 12631.7 12938.400000000001 13764.599999999999 12022.5 12764.599999999999 False True 12377.00090427313 11965.06660468682 12427.611091776513 13064.41484268008 12695.362049122767 11531.916824386946 13112.406255831465 12680.333462021557 13186.121729685885 11263.397298227317 11194.63512146622 1.1056189656900626 1.0688214912644416 1.110139897989708 1.1670246239315538 1.1340576902572586 1.0301288697006277 1.1713116250379463 1.1327152090653176 1.1778965179848424 1.006142422331322 1.0 13.45051988522723 -10.950246132517217 1.2144159087962973 1.0000593889580378 1.1260314908212632 0.5367041539115914 0.042394037977374045 0.30150178186098586 0.7910169079329729 0.03145576731683363 0.007350083245900415 1.1213827405277395e-11 10.950246132517217 0.12597210186322538 EDLKPWEKS(ph)PILK ddPTM_A549_MK2206_60min_R1 2 EDLKPWEKSPILK 13 2 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 EDLKPWEKS(1)PILK;EDLKPWEKS(1)PILK 76.548 0.00020219999999999998 16292200.0 2010.74 2096.2799999999997 2028.25 1653.69 3680.5 2912.3 2736.58 2810.7799999999997 3692.3999999999996 3717.6000000000004 3766.6 True False 2350.1037541268424 2202.971698064181 2315.8863485666784 2058.844124236966 3139.1033255288667 3220.4776529717174 3233.7811631347213 3209.216672652735 2856.0772955511748 2877.7915780146686 2831.2492671284413 0.830058935965891 0.7780917503948769 0.8179733149796227 0.7271857508770757 1.1087343534088268 1.1374758451551128 1.1421746579080063 1.133498455933427 1.0087692838320503 1.016438789557174 1.0 11.467223056378028 -6.7607320475126205 24.999919775981382 1.041089350870237 0.7897138598241804 0.8279378430561047 0.062111108042525634 7.716738607583194 272720.6480632164 0.010912891789357119 0.02170212673156518 1.7348740561151097e-07 6.7607320475126205 -0.2513754910460566 EDLKPWEKS(ph)PILK ddPTM_A549_PD325901_60min_R1 2 EDLKPWEKSPILK 13 2 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 EDLKPWEKS(1)PILK;EDLKPWEKS(1)PILK 83.96799999999999 8.4848e-05 17837200.0 3849.2 4709.1 4363.3 4955.7 4182.5 5416.0 4736.2 4217.799999999999 5619.4 5696.6 5993.9 True False 4239.967950368726 5105.952383587891 4659.419776654388 5261.8023337887 3888.7356288416895 5371.893891669076 4916.438682748088 4133.67267019991 5383.236159989892 5336.915703812164 5256.688298462654 0.8065853841112716 0.9713249281075224 0.8863793156647809 1.0009728625772887 0.7397691109018145 1.0219160023698028 0.9352730090893778 0.7863644248050287 1.0240736856252726 1.0152619673821963 1.0 12.359938475802737 -8.81390462118564 24.999647217150947 1.0113682346104598 0.9000459639572158 0.28021461236197054 0.0848527551027934 87.71653184654481 41796.429254702954 0.01341414159445173 0.014280446822401002 1.5349540490718748e-09 8.81390462118564 -0.11132227065324396 EDLLS(ph)PVQDADR ddPTM_A549_PD325901_60min_R1 2 EDLLSPVQDADR 12 0 O94991-2;O94991 O94991-2 SLITRK5 SLIT and NTRK-like protein 5 1 EDLLS(1)PVQDADR;EDLLS(1)PVQDADR 75.045 0.0012745 1162090.0 437.35 395.01 334.13 388.51 318.55 377.06 276.58 435.59000000000003 330.32000000000005 488.32 438.86 True False 481.7494500399469 428.2988789877154 356.80607108691396 412.5073803297715 296.1761469378411 373.9893483738447 287.1054032503832 426.9018157362557 316.43779911874265 457.4873918627873 384.88300216275223 1.251677645759564 1.1128027909286684 0.9270507377097271 1.0717734428691084 0.7695225439251786 0.9716961940961449 0.745955008761279 1.1091729521371154 0.8221662098367578 1.1886401563385578 1.0 8.588276147655092 -5.315376596481451 1.1136029668609326 0.9156538782837822 1.406458619367242 0.2777911670804555 0.13656240563292535 0.9811191628543277 1.0297913845100437 0.015693485757648583 0.5493890607590403 4.8375270170328555e-06 5.315376596481451 0.49080474108345973 EDLPAENGETKTEES(ph)PASDEAGEK ddPTM_A549_MK2206_60min_R1 1 EDLPAENGETKTEESPASDEAGEK 24 1 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.001)KT(0.016)EES(0.931)PAS(0.052)DEAGEK 84.641 1.7333000000000002e-06 5364100.0 1880.4 1945.9 2080.5 1700.0 2851.7 2754.2 1828.4 2561.2 2984.7 3191.3 2947.7 True False 2197.765548633893 2044.9379983890963 2375.5461842440404 2116.5000763159005 2432.218707624147 3045.6476159100034 2160.5966128070518 2924.257943346041 2308.670215586499 2470.3831135458913 2215.704737618676 0.991903619340516 0.9229289280605543 1.0721402287550073 0.9552265879029552 1.0977178801531873 1.3745728680362468 0.9751283987094546 1.3197868351759183 1.0419575209591045 1.1149423800036327 1.0 11.113549926900081 -5.770518679369304 24.402014970311875 1.0643564466861737 0.957416273455862 0.09681344698597538 0.13215164161852216 241.1576081183352 648158.6365018048 0.018234034226237154 0.057909382096379296 1.696216644992964e-06 5.770518679369304 -0.10694017323031169 EDLPAENGETKTEES(ph)PASDEAGEK ddPTM_A549_PD325901_60min_R1 2 EDLPAENGETKTEESPASDEAGEK 24 1 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.001)KT(0.013)EES(0.976)PAS(0.01)DEAGEK;EDLPAENGETKT(0.001)EES(0.992)PAS(0.007)DEAGEK 121.26 1.4075e-16 16381100.0 5099.2 5295.5 4605.0 5003.799999999999 5767.5 5741.6 5188.1 4896.1 5081.3 5086.1 5632.5 True False 5616.867030167365 5741.770369558867 4917.522992114561 5312.873361545674 5362.410696794844 5694.842313221411 5385.535984537251 4798.443444583852 4867.7506316967365 4764.962778000742 4939.738207359294 1.1370778762727292 1.1623632930596794 0.9955027545363362 1.0755374350872435 1.0855657671910317 1.1528631830604203 1.0902472476200866 0.9713963054631237 0.985426843966081 0.9646184834050174 1.0 12.270218869599065 -8.230253728481316 8.033559763126034 0.9912980634298076 1.0989589090582224 0.6297125606442806 0.04379633770176436 0.1492559986148102 34.66029861212986 0.006997216943980773 0.00898495855337466 5.884997348657618e-09 8.230253728481316 0.10766084562841471 EDLPAENGETKTEES(ph)PASDEAGEKEAK ddPTM_A549_MK2206_60min_R1 1 EDLPAENGETKTEESPASDEAGEKEAK 27 2 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.034)KT(0.178)EES(0.783)PAS(0.006)DEAGEKEAK 91.40700000000001 1.5341e-09 15647000.0 2039.2 2329.8 2332.3 2269.5 3217.2 2500.9 1997.5 2399.5 2858.3 3285.6 3056.1 True False 2383.3671063466463 2448.3768686196177 2663.055210532264 2825.527601881727 2743.9541417990695 2765.543578036936 2360.4198939411976 2739.636473160558 2210.899613767175 2543.3806780516966 2297.1860259308746 1.0375159344706744 1.0658156722973608 1.1592684181739834 1.229995120110813 1.1944849528183743 1.2038831626255744 1.027526664056168 1.1926054060207822 0.9624382130181494 1.1071722748361479 1.0 11.165651975431478 -8.768634917036286 24.999872885321086 0.9822624785102194 1.1404753348126655 0.27626896855564176 0.07583733419037757 92.48615416220758 321329.126715847 0.011769374017622392 0.01265595447693178 1.7035900033124658e-09 8.768634917036286 0.15821285630244608 EDLPAENGETKTEES(ph)PASDEAGEKEAK ddPTM_A549_PD325901_60min_R1 1 EDLPAENGETKTEESPASDEAGEKEAK 27 2 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGET(0.307)KT(0.263)EES(0.37)PAS(0.06)DEAGEKEAK 82.336 5.7643e-07 24413000.0 2581.0 2707.9 3163.3 2798.0 3016.2 3169.9 3219.8 2766.4 2924.7 3335.7 3319.0 True False 2843.021219968223 2936.104236375878 3377.980560468186 2970.826105280948 2804.352517325118 3144.0853853769954 3342.3312509421658 2711.221981801184 2801.78502991822 3125.0833327258747 2910.7840408744805 0.9767200795542702 1.0086987544063182 1.160505387219777 1.0206274541715672 0.9634354448647493 1.0801506883459566 1.1482580651837146 0.9314404448179734 0.9625533844401888 1.0736225322257205 1.0 11.507192090554575 -8.292273509136075 24.998932092276142 0.9780070588836968 1.0503310090806077 0.13991122177802995 0.06757861085165671 748.775647789203 607072.0640990178 0.010142580929395862 0.012262428173315737 5.1018359634424466e-09 8.292273509136075 0.07232395019691096 EDLPAENGETKTEESPAS(ph)DEAGEKEAK ddPTM_A549_PD325901_60min_R1 1 EDLPAENGETKTEESPASDEAGEKEAK 27 2 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 EDLPAENGETKTEES(0.036)PAS(0.964)DEAGEKEAK 160.11 1.1025999999999998e-41 27307000.0 4315.5 3686.5 4002.4 4543.9 5169.7 4044.9 4360.1 4017.8 4949.0 5016.9 5476.8 True False 4753.6063830968105 3997.1742927728733 4274.026932386387 4824.56638305436 4806.5981064968055 4011.9596754823233 4526.025991438268 3937.6618270968734 4741.010740611094 4700.132077810487 4803.188320295675 0.9896772864413086 0.8321918746935192 0.8898312219670134 1.0044508067002813 1.0007099005855595 0.835270118085929 0.9422961769609846 0.8198016743292044 0.9870549361094478 0.9785442011403701 1.0 12.22977665859875 -8.959874247189015 24.99609602422544 0.9942890322674611 0.9141966449304891 0.21082080231800016 0.06385782946151379 150.11974291072747 93516.63145370402 0.010711992473111423 0.011388833337178847 1.0967957345550355e-09 8.959874247189015 -0.08009238733697199 EDLRLPEGDLGK ddPTM_A549_MK2206_60min_R1 2 EDLRLPEGDLGK 12 1 I3L397;I3L504;P63241;P63241-2 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 0 ; 93.766 0.00026639999999999997 13991100.0 5542.7 5843.5 5670.7 4343.0 6540.200000000001 5816.4 4984.8 6830.9 8111.0 6869.2 6920.1 False True 6478.172253995464 6140.909190393486 6474.8905296768435 5407.035194964681 5578.145243750551 6431.887587386154 5890.473635703674 7799.20099375389 6273.871450605449 5317.442949133407 5201.6481849560705 1.245407613827342 1.1805698832446792 1.2447767129663203 1.0394849868167977 1.072380338963209 1.2365095367249397 1.1324244597586948 1.4993711063178634 1.206131446711526 1.0222611680105993 1.0 12.34475311012843 -10.488741098836698 1.0312725070529822 1.0104402760153064 1.2019603269347974 0.2989919505392751 0.11410317226593635 0.4824826469026854 0.9827516180327197 0.05864596683882817 0.020922811500328767 3.245330274484847e-11 10.488741098836698 0.19152005091949098 EDLRLPEGDLGK ddPTM_A549_PD325901_60min_R1 1 EDLRLPEGDLGK 12 1 I3L397;I3L504;P63241;P63241-2 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 0 83.204 0.00059126 16119000.0 2070.1 2450.9 2392.0 2169.6 2612.5 2239.4 2388.8 2369.1 2487.1 2365.3 2578.5 False True 2280.2550280729247 2657.445944434297 2554.3355042645007 2303.6112644808954 2429.0070126357223 2221.1630688707023 2479.7070912015183 2321.846441977005 2382.575836123228 2215.9545543353775 2261.360846458225 1.0083552262984885 1.1751534252467606 1.129556792435465 1.0186836249901663 1.0741350795208413 0.9822240764226192 1.096555242426378 1.0267474320224095 1.0536026746261444 0.97992081087193 1.0 11.142975506675493 -6.2639328183758485 24.927627518428 1.0310633268626415 1.1114349776093027 0.30513772513356385 0.05027552267679891 163.50243951594632 1634594.430416054 0.00634143184468758 0.015423698323005289 5.445868892386757e-07 6.2639328183758485 0.0803716507466612 EDLRLPEGDLGKEIEQK ddPTM_A549_MK2206_60min_R1 2 EDLRLPEGDLGKEIEQK 17 2 I3L397;I3L504;P63241;P63241-2 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 0 ; 116.29 4.7907e-10 30809000.0 2812.8999999999996 3477.6000000000004 2761.8 2875.1000000000004 3640.7 3271.5 2880.8 2679.6000000000004 4374.5 4580.5 4828.9 False True 3287.6487511977653 3654.594985969434 3153.4647688753626 3579.4996290681447 3105.157852806129 3617.687958554054 3404.2040703208036 3059.4415059308326 3383.6827346410496 3545.7618687045883 3629.750859139946 0.9057505263534147 1.0068445818442138 0.8687827047233105 0.9861557357455359 0.8554741009254512 0.9966766587972514 0.9378616336018762 0.842879201537197 0.9322079850523952 0.9768609489480888 1.0 11.825654811776081 -10.357147011887296 0.9523618183785793 0.996170951236056 0.9274257348985947 0.1637753116113202 0.053443951508783484 0.592373778519674 1.0382119314692762 0.0240166186695213 0.009140691894460038 4.3939285253719274e-11 10.357147011887296 -0.06874521633746133 EDLRLPEGDLGKEIEQK ddPTM_A549_PD325901_60min_R1 4 EDLRLPEGDLGKEIEQK 17 2 I3L397;I3L504;P63241;P63241-2 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 0 ;;; 106.67 3.4255000000000002e-09 47949200.0 6089.6 5925.4 6540.0 6579.3 8075.4 7277.0 7312.099999999999 7329.7 7828.700000000001 7452.6 7017.4 False True 6707.811709073421 6424.754253193111 6983.843728214814 6985.688418325566 7508.211762617617 7217.738524681659 7590.365966834652 7183.503383461585 7499.686964037602 6982.041564131329 6154.304286963718 1.0899382604922807 1.0439448479663689 1.1347901245325582 1.1350898643609346 1.219993587012231 1.1727951996085972 1.23334265140462 1.1672324032917831 1.2186084103647141 1.1344972946691887 1.0 12.587380061196857 -4.284045279360532 12.27010060661306 1.126963542355649 1.1368578513307406 0.0 0.07176905763792249 0.0 0.0 0.012432039651930035 0.0 5.199417847951092e-05 4.284045279360532 0.009894308975091581 EDLSKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 EDLSKSPK 8 1 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 EDLS(0.014)KS(0.986)PK;EDLS(0.03)KS(0.97)PK 88.441 0.00074878 55111000.0 16992.2 17009.9 16836.6 15673.8 19459.6 13902.3 14330.9 14198.4 20968.0 22643.0 21980.0 True False 19860.06794059605 17875.631254842825 19224.283050056823 19513.88170362361 16597.118617976244 15373.432158400126 16934.639027825757 16211.066680776368 16218.781479015544 17527.93057375352 16521.759382860706 1.2020552702878866 1.081944776013782 1.1635736003999462 1.1811019184716407 1.004561211271102 0.9304960689808963 1.0249900531412752 0.9811949384514919 0.9816618861935815 1.060899760587035 1.0 14.012079705397339 -6.800233163432377 7.133907652040561 0.9887745983103386 1.1522350257802068 0.7740106559300123 0.041260995316037094 0.05214405624650838 7.377162333567121 0.00466267284277676 0.008940889269028833 1.584042525526545e-07 6.800233163432377 0.1634604274698681 EDLSKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 EDLSKSPK 8 1 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 EDLS(0.016)KS(0.984)PK 70.488 0.0018327999999999999 229870000.0 18624.0 18056.0 18523.0 19553.0 20848.0 17473.0 19426.0 20068.0 19032.0 20866.0 18116.0 True False 20514.694769735823 19577.64248753751 19780.08216784755 20760.744401915068 19383.708401695523 17330.705681154686 20165.26706031509 19667.72799695855 18232.151225562815 19548.517198986166 15887.846846785797 1.2912193179836742 1.2322401314875577 1.2449819260341861 1.3067059748322716 1.2200336891853258 1.0908152532110282 1.2692259218494821 1.2379102207255632 1.1475533092296446 1.230406951143348 1.0 13.955636000526386 -10.186350480364492 0.26910150723116033 0.9093484587954394 1.2780493246881277 0.01813608005850531 0.08686697443201553 1.2339078619454955 0.15550005469375724 0.15102247951418363 0.03945835965266672 6.511027350032269e-11 10.186350480364492 0.36870086589268836 EDLSPAFDHS(ph)PNK ddPTM_A549_MK2206_60min_R1 2 EDLSPAFDHSPNK 13 0 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK 150.76 2.1179e-13 66392000.0 4559.0 4924.299999999999 3884.0 4144.8 5129.0 5250.9 4525.1 6066.6 6868.8 6505.8 6717.5 True False 5328.447743151411 5174.925836614123 4434.809603270295 5160.276186067144 4374.530894345214 5806.546752734675 5347.252096156858 6926.5591281833085 5313.027767219667 5036.135261525669 5049.3593564316125 1.0552720388903019 1.0248678042735402 0.8782915396230344 1.0219665153153046 0.8663536471756883 1.1499571218551905 1.0589961455894015 1.3717698898496136 1.0522181908982586 0.9973810351031762 1.0 12.301884640461275 -7.2685072742675985 24.81679406091456 1.0648513087769562 0.970298916143524 0.22136670357331045 0.11383063488855315 822.1288176483633 2886656.8636788344 0.01779134107785744 0.028820252944681154 5.3888081924867475e-08 7.2685072742675985 -0.09455239263343218 EDLSPAFDHS(ph)PNK ddPTM_A549_PD325901_60min_R1 2 EDLSPAFDHSPNK 13 0 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK 183.36 1.2203000000000001e-25 113708000.0 8637.4 8516.7 9824.9 9077.2 10915.900000000001 8660.3 9345.3 9643.8 9935.2 8949.9 10547.5 True False 9514.262489482186 9234.432198361255 10491.676795923206 9637.878028183059 10149.204841810637 8589.773388113314 9700.94050544438 9451.446843585258 9517.65809458867 8384.80178660051 9250.224366111346 1.0285439696293375 0.9982927800315908 1.1342078181757387 1.0419074875082923 1.097184721161224 0.9286016260948624 1.048724887256168 1.0217532537060507 1.0289110531693784 0.9064430715127998 1.0 13.175272643582987 -7.188292280662211 24.999991561727175 1.0122503599008743 1.0597120728800633 0.24685945821003863 0.053982579522272214 163.9265425654929 56025.806475205514 0.006048341831666027 0.010476033761331091 6.481980487239044e-08 7.188292280662211 0.047461712979189 EDLSPAFDHS(ph)PNKIMTEK ddPTM_A549_MK2206_60min_R1 3 EDLSPAFDHSPNKIMTEK 18 1 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 EDLSPAFDHS(0.783)PNKIMT(0.217)EK;EDLS(0.001)PAFDHS(0.782)PNKIMT(0.217)EK;EDLSPAFDHS(1)PNKIMTEK 87.156 3.2777999999999998e-06 18683300.0 3142.95 3480.41 3589.0 3068.5600000000004 4343.3 2804.84 3147.8900000000003 2960.6800000000003 4975.0 5386.5 4926.1 True False 3673.4031222499966 3657.5480029669516 4097.974167388543 3820.3573377528924 3704.4063235347207 3101.646307097891 3719.820866051844 3380.3654567022313 3848.1704434424996 4169.68590891328 3702.8134165564193 0.9920573112933749 0.9877753998116481 1.1067190555876345 1.0317444893849899 1.0004301882917404 0.8376458541576725 1.0045931154455094 0.9129181183117616 1.0392558334795223 1.1260858811490015 1.0 11.854406139116088 EDLSPAFDHS(ph)PNKIMTEK ddPTM_A549_PD325901_60min_R1 6 EDLSPAFDHSPNKIMTEK 18 1 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 EDLSPAFDHS(0.997)PNKIMT(0.002)EK;EDLSPAFDHS(0.998)PNKIMT(0.002)EK;EDLSPAFDHS(0.974)PNKIMT(0.026)EK;EDLSPAFDHS(1)PNKIMTEK;EDLSPAFDHS(0.996)PNKIMT(0.004)EK;EDLS(0.024)PAFDHS(0.95)PNKIMT(0.026)EK 100.7 3.3479000000000004e-09 34537400.0 8780.64 8476.900000000001 8907.6 10361.3 11158.099999999999 11234.1 10187.000000000002 10807.3 12048.7 10809.9 11754.4 True False 9672.044108834476 9191.278112683143 9512.123301750196 11001.293968780372 10374.39354935527 11142.613214253988 10574.671859540294 10591.739923337156 11542.335039482896 10127.361069170927 10308.683317280804 0.9382424322435915 0.8916054388124898 0.9227292185612778 1.0671871111161715 1.0063742604222126 1.0808958691722772 1.02580237786659 1.0274580756188187 1.1196711242583308 0.9824107267117306 1.0 13.331572454938671 -6.249242974082341 12.074254055152252 1.0521039736833924 0.914901364068131 0.6330834453314167 0.040150768166455186 0.41357417621901416 405.3319706354583 0.006355525451111453 0.016348690749459847 5.633224065063712e-07 6.249242974082341 -0.13720260961526132 EDLTEIR ddPTM_A549_MK2206_60min_R1 1 EDLTEIR 7 0 F8VWS0;P05388;P05388-2;Q8NHW5;F8VW21;F8VZS0;F8VU65;F8VWV4;F8VS58;F8VQY6;F8VPE8;F8VRK7;G3V210 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like 0 104.45 0.027953 3501200.0 1408.4 1427.0 1425.1 1005.5 1765.2 1219.5 1477.9 1283.6 2240.6 1969.2 1551.3 False True 1646.1034879259591 1499.6282047901936 1627.2006090681007 1251.8475451386103 1505.5414183463 1348.546680561416 1746.415299752539 1465.5542308601343 1733.107677502968 1524.356352331203 1166.06939629808 1.4116685449012238 1.286053994342929 1.3954577782711508 1.073561787242552 1.291125059216837 1.156489214829449 1.497694138356502 1.2568327712851644 1.4862817624792009 1.3072604059163 1.0 10.187437934877927 -11.000198324766611 1.2824033979789946 1.0002225865046825 1.3280745533041711 0.018900637220525707 0.15160760286759262 0.31590107339126167 0.9257402196973331 0.08971613046728454 0.0205091828393753 9.995434446019783e-12 11.000198324766611 0.3278519667994886 EDLVGPEVGAS(ph)PQSGR ddPTM_A549_PD325901_60min_R1 1 EDLVGPEVGASPQSGR 16 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(0.974)PQS(0.026)GR 61.821000000000005 0.0038155000000000003 9193600.0 2024.5 2046.5 2075.3 2884.6 3197.2 2948.6 2276.8 2360.9 2710.4 2675.4 3229.4 True False 2230.02574964187 2218.965737192376 2216.1423377926935 3062.7751905980776 2972.6397017412205 2924.587579205215 2363.4448699127665 2313.809997409781 2596.491313669895 2506.474787413379 2832.2042728532815 0.7873816768856323 0.7834765869330804 0.7824796957742242 1.0814104123614323 1.0495852047940237 1.032618871187163 0.8344895502652896 0.8169643763296606 0.9167740259971011 0.8849908219678841 1.0 11.467709608276646 -6.229873876954501 23.55488801710045 0.9585856356406048 0.7843489152272374 0.454527232230877 0.08157383947543793 236.55958056119974 176525.1434134017 0.012052005187011319 0.03188168346427875 5.890146857120504e-07 6.229873876954501 -0.17423672041336746 EDLVGPEVGAS(ph)PQSGRK ddPTM_A549_MK2206_60min_R1 3 EDLVGPEVGASPQSGRK 17 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(0.907)PQS(0.093)GRK;EDLVGPEVGAS(0.981)PQS(0.019)GRK;EDLVGPEVGAS(0.833)PQS(0.167)GRK 86.44 9.434299999999999e-06 43986800.0 7683.0 7758.6 7402.3 6044.469999999999 12022.0 10257.0 8256.6 8627.2 13836.5 12027.1 12512.2 True False 8979.702568684424 8153.4796003400115 8452.057447550904 7525.365421346571 10253.579725447096 11342.388931954438 9756.717344838504 9850.13201969193 10702.554842350188 9310.169756816285 9405.075420847572 0.9547719892580283 0.8669233616422432 0.8986698212771181 0.800138763870582 1.0902177033815916 1.2059859623042 1.0373885278167436 1.047320896317092 1.1379552383627445 0.9899091012262469 1.0 13.1992237976659 -6.773588596335042 24.998139252758836 1.0753198014627998 0.8805075001760025 0.6586012577091942 0.06667311568733832 106.01280622418108 218131.26454685227 0.010280407699805073 0.01953083837023448 1.6842687998788504e-07 6.773588596335042 -0.19481230128679727 EDLVGPEVGAS(ph)PQSGRK ddPTM_A549_PD325901_60min_R1 2 EDLVGPEVGASPQSGRK 17 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(0.971)PQS(0.029)GRK;EDLVGPEVGAS(0.999)PQS(0.001)GRK 120.9 3.4647000000000005e-10 64070000.0 14111.4 13825.7 15494.1 15341.2 17744.1 18500.9 15485.3 17157.2 17997.1 16539.1 17650.8 True False 15543.978939736371 14990.840260298377 16545.622799592235 16288.79108160689 16497.815629821827 18350.23480435386 16074.601565381294 16814.986186436978 17240.74447360112 15494.818403419535 15479.863497640026 1.0041418609476833 0.9684090730246941 1.0688481072274758 1.052256764673034 1.0657597615338787 1.185426138102021 1.0384201106057516 1.0862489962524862 1.1137530041030108 1.0009660877036666 1.0 13.91810512931691 -5.768117606826982 24.946541042234166 1.066109095607911 0.9862754607555201 0.2863960875119038 0.04966318225252938 143.60474357192692 536444.6961800504 0.007532025012991297 0.02421727231368226 1.7056204449085422e-06 5.768117606826982 -0.07983363485239081 EDLYLKPIQR ddPTM_A549_PD325901_60min_R1 1 EDLYLKPIQR 10 1 P13639 P13639 EEF2 Elongation factor 2 0 98.249 0.00050379 2935900.0 1839.6 1810.8 2084.0 1902.6 1749.2 2296.5 1786.0 1830.2 1931.5 1991.2 2208.6 False True 2026.354837758057 1963.4024710031524 2225.432772110041 2020.1192808818898 1626.3422264124051 2277.798065402149 1853.9672073367 1793.6952252358751 1850.3257719721814 1865.4752921796824 1936.9562014689297 1.0461541857380823 1.0136535196377525 1.148932934271998 1.0429349302528843 0.8396381008403988 1.1759677702958564 0.9571549454400191 0.9260380920722886 0.9552749672754344 0.9630962696858926 1.0 10.91957561669413 -6.538423831550936 24.999707646468117 0.978390369745726 1.0693119817151362 0.22056268036035853 0.0812904875386466 261.8942528635307 421178.9249113052 0.010760302122032477 0.022404319907579146 2.8945174255653496e-07 6.538423831550936 0.09092161196941018 EDMAALEK ddPTM_A549_MK2206_60min_R1 1 EDMAALEK 8 0 Q9BQE3;F5H5D3;Q71U36-2;Q71U36;P68363;P68363-2;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 87.30799999999999 0.0075169 2358900.0 1867.2 2210.8 1950.4 1659.3 3420.1 2721.9 2118.2 2208.7 3474.3 2557.3 2954.4 False True 2182.3377113429074 2323.3202769097147 2226.996047945001 2065.828574488807 2917.007820579075 3009.929651349011 2503.049521575094 2521.789988860066 2687.3765973170407 1979.6041538780141 2220.7409427080843 0.9827070188032171 1.046191490519619 1.002816674883874 0.9302429359318385 1.3135290859373843 1.3553718011244256 1.127123598001822 1.135562433403361 1.210126109549688 0.8914160656055561 1.0 11.116825391878997 -6.726036268355696 24.999997227769878 1.138367239560592 0.9953487461553551 0.26740110246676185 0.12439897181673866 211.2383636153444 149165.55452457521 0.017745943698557972 0.036939979204170165 1.8791598797763133e-07 6.726036268355696 -0.14301849340523687 EDMAALEKDYEEVGADS(ph)ADGEDEGEEY ddPTM_A549_PD325901_60min_R1 1 EDMAALEKDYEEVGADSADGEDEGEEY 27 1 Q9BQE3;F5H5D3 Q9BQE3 TUBA1C Tubulin alpha-1C chain 1 EDMAALEKDYEEVGADS(0.999)ADGEDEGEEY(0.001) 134.91 6.4517e-25 4983200.0 2144.2 1652.1 2024.5 2514.3 2131.6 1975.9 1963.2 3034.5 1904.7 2231.0 2502.5 True False 2361.8776055233875 1791.3282650454535 2161.8947443074753 2669.6026006103957 1981.8837696207872 1959.8089255075581 2037.9106503042597 2973.9745169808034 1824.6520827726715 2090.1342792551586 2194.70836465453 1.07616922756622 0.816203325186409 0.9850487559643397 1.2163814762835785 0.903028302775324 0.8929700898169458 0.9285564693352996 1.3550659235077631 0.8313870362725349 0.952351716937192 1.0 11.099813530199631 EDNDTINDS(ph)LIVSETK ddPTM_A549_MK2206_60min_R1 2 EDNDTINDSLIVSETK 16 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 EDNDTINDS(0.999)LIVS(0.001)ETK;EDNDTINDS(0.999)LIVS(0.001)ETK 110.22 4.889100000000001e-07 2393200.0 1991.03 1873.1799999999998 1718.7799999999997 1791.33 2759.9 2308.9 1921.21 2806.2 3396.7 2655.8 3245.4 True False 2327.067187990077 1968.5168610013297 1962.5288491011636 2230.2059304158593 2353.922366017422 2553.226265476221 2270.268988454955 3203.98744362707 2627.352873415304 2055.8529354667953 2439.4776115166565 0.953920288919277 0.8069419664718611 0.8044873377136808 0.9142145514626427 0.9649288662886955 1.0466282836221013 0.9306373535617315 1.3133907966612195 1.0770145464798273 0.8427431044094081 1.0 11.252356527548036 -6.914035083579926 1.5265151716540575 1.0539296281071204 0.8509067552676594 0.30810437822233494 0.11526966638470577 0.27120719059108017 1.2651980340361038 0.015028109971726858 0.03499057597242179 1.2188911293530683e-07 6.914035083579926 -0.20302287283946108 EDNDTINDS(ph)LIVSETK ddPTM_A549_PD325901_60min_R1 1 EDNDTINDSLIVSETK 16 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 EDNDTINDS(1)LIVSETK 149.57 5.3242e-41 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EDNPEEPSKEITSHEEGGGDVS(ph)PR ddPTM_A549_MK2206_60min_R1 4 EDNPEEPSKEITSHEEGGGDVSPR 24 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EDNPEEPSKEITSHEEGGGDVS(1)PR;EDNPEEPSKEITSHEEGGGDVS(1)PR;EDNPEEPSKEITSHEEGGGDVS(1)PR;EDNPEEPSKEITSHEEGGGDVS(1)PR 187.92 8.381e-51 95394500.0 3160.4500000000003 2796.7400000000002 2777.56 2052.92 3960.08 2999.9300000000003 3466.88 3824.29 4891.27 3902.71 4269.139999999999 True False 3693.856694416074 2939.0821201576227 3171.459773856704 2555.885492159079 3377.5574778862538 3317.380601407633 4096.7672199784065 4366.3948188969325 3783.405154753167 3021.0851004501897 3208.994715730023 1.1510946641044089 0.9158887379124284 0.9883032085751565 0.796475444359725 1.0525282143127133 1.0337756510306229 1.2766512826888285 1.3606737329586438 1.179000119946433 0.9414428405385874 1.0 11.647905698589577 -7.262479238266476 2.7159207342134537 1.1244018807984135 0.9620055913737847 0.2460452296731388 0.13690072853764754 0.33936166373267995 4.980145635392478 0.0217598413000107 0.03830555730291337 5.4641267087481856e-08 7.262479238266476 -0.1623962894246288 EDNPEEPSKEITSHEEGGGDVS(ph)PR ddPTM_A549_PD325901_60min_R1 4 EDNPEEPSKEITSHEEGGGDVSPR 24 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EDNPEEPSKEITSHEEGGGDVS(1)PR;EDNPEEPSKEITSHEEGGGDVS(1)PR;EDNPEEPSKEITSHEEGGGDVS(1)PR;EDNPEEPSKEITSHEEGGGDVS(1)PR 212.28 2.3084999999999994e-74 102619100.0 3308.1700000000005 3722.84 3330.5 4045.27 3999.9500000000003 3291.59 2704.63 2963.62 3788.13 3982.26 4741.7 True False 3644.012983053962 4036.5767921081165 3556.527757923464 4295.137140425252 3719.0073110783765 3264.7843823631874 2807.5561746803232 2904.5082741850865 3628.928069676925 3730.819423983255 4158.500960112839 0.8762804236445538 0.9706807406865637 0.855242740602123 1.0328570755719402 0.8943144048179956 0.7850868410703936 0.6751365940779155 0.6984507884077233 0.8726529353929634 0.897154878589236 1.0 12.02184784976943 -4.2977785618979425 16.49487609016604 0.8968186908570743 0.8732657337902716 0.0 0.11213869592291231 0.0 0.0 0.01672521333461287 0.0 5.0375739917556524e-05 4.2977785618979425 -0.023552957066802716 EDNS(ph)EGEEILEEVGGDLEEEDDHHMEFCR ddPTM_A549_PD325901_60min_R1 1 EDNSEGEEILEEVGGDLEEEDDHHMEFCR 29 0 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR 80.593 6.9037e-06 1017500.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 118.81 170.12 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 116.44024134535805 162.97044800823585 0.0 0.0 0.0 EDNT(ph)DTDQEKKEEK ddPTM_A549_MK2206_60min_R1 1 EDNTDTDQEKKEEK 14 2 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 EDNT(0.861)DT(0.139)DQEKKEEK 46.964 0.011252 18650000.0 2679.2 2899.1 3046.6 2911.1 1238.0 582.91 551.21 535.88 1028.9 3901.4 4932.0 True False 3131.3834598489275 3046.6518069427116 3478.6536913808663 3624.319630684246 1055.8918399686827 644.5931492956573 651.3577220221916 611.8426310636719 795.8557928156762 3020.0710303600226 3707.2482837247053 0.8446651586828166 0.8218094861134344 0.9383384724062322 0.977630671944869 0.28481821533350843 0.1738737467694041 0.1756984351120305 0.16503956148546603 0.21467561164154692 0.8146395383385896 1.0 11.856133023963585 -6.749973090108098 24.994903209683635 0.4957127391873214 0.8933914435062458 0.40667255736604846 0.27159922016418236 280.91849851183053 612358.8468082119 0.05326916401029323 0.1101363396051969 1.778389599763342e-07 6.749973090108098 0.3976787043189244 EDNTDT(ph)DQEKKEEK ddPTM_A549_PD325901_60min_R1 2 EDNTDTDQEKKEEK 14 2 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 EDNT(0.207)DT(0.793)DQEKKEEK;EDNT(0.278)DT(0.722)DQEKKEEK 108.17 5.4496e-06 79634000.0 13359.5 13877.4 14620.9 13036.3 16624.8 13789.2 13362.4 13898.3 12173.2 15439.1 13996.7 True False 14715.746605255903 15046.897200739528 15613.162196614066 13841.522643414586 15457.13140044645 13676.905326994696 13870.91344418585 13621.087503494567 11661.60273744332 14464.272591146708 12275.194632391633 1.1988198188258596 1.225797036328366 1.2719278727698742 1.127601073378482 1.2592168078262775 1.114190506674676 1.1299953980023627 1.1096433019115974 0.9500136728317794 1.178333462263691 1.0 13.583458279279649 -8.19292265662581 1.0547138177933681 0.9754206061585202 1.2130306796999113 0.3477798554072672 0.07753316873636149 0.13653454536001208 0.29849153757950064 0.009299311364624432 0.012674510703411091 6.413237795754675e-09 8.19292265662581 0.23761007354139108 EDPLTS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 EDPLTSPSR 9 0 H3BS19;Q96JG9 H3BS19 ZNF469 Zinc finger protein 469 1 EDPLT(0.152)S(0.653)PS(0.195)R 50.108000000000004 0.028827999999999996 1744900.0 345.09 544.29 326.29 306.17 387.93 295.72 378.02 509.72 724.36 645.0 557.34 True False 403.33275535953493 571.992036149443 372.5628283859592 381.18166374449356 330.8660108877636 327.0128941169509 446.7013408298634 581.974370952032 560.2936165652283 499.2940520280448 418.93709619852535 0.9627525445213955 1.3653411009427254 0.8893049380602229 0.9098780394559752 0.7897749182158202 0.7805775546837382 1.066273063147841 1.3891688662401163 1.3374170529403704 1.1918115071658395 1.0 8.710589827934974 -8.000701063004303 24.962699800052135 1.183248942618861 0.9539181935204816 0.35069828919448753 0.17380123653390822 30.52315446324719 1086889.8955677683 0.03208170901922037 0.044040653244938444 9.983870449894362e-09 8.000701063004303 -0.22933074909837947 EDPQARPLEGSSSEDS(ph)PPEGQAPPS(ph)HSPR ddPTM_A549_MK2206_60min_R1 1 EDPQARPLEGSSSEDSPPEGQAPPSHSPR 29 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 2 EDPQARPLEGS(0.012)S(0.013)S(0.048)EDS(0.927)PPEGQAPPS(0.57)HS(0.43)PR 59.364 0.0044091 3472600.0 559.37 616.33 565.02 561.0 643.13 725.15 658.7 914.23 701.21 781.66 925.17 True False 653.7779807165177 647.6985644417241 645.1483321420656 698.4450251842472 548.5264289491596 801.8848916843874 778.3772636490951 1043.824902211952 542.3870546022744 605.0824631135533 695.4247556069718 0.9401131832672474 0.9313711644855209 0.9277040067102234 1.0043430573227716 0.7887645996588111 1.1530864917003083 1.1192832256449108 1.500988990966958 0.7799363629626257 0.8700904853256669 1.0 9.441750614556286 -4.450260031877433 13.219495290470434 0.9641376504277505 0.9448731382906709 0.0 0.19711387509353853 1360521.9085893037 48211.69955859463 0.027383270348771725 2230670.211227425 3.5460100989161e-05 4.450260031877433 -0.01926451213707958 EDPQARPLEGSSSEDSPPEGQAPPSHS(ph)PR ddPTM_A549_MK2206_60min_R1 4 EDPQARPLEGSSSEDSPPEGQAPPSHSPR 29 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 EDPQARPLEGSSSEDSPPEGQAPPS(0.44)HS(0.56)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.046)HS(0.954)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.1)HS(0.9)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.425)HS(0.575)PR 221.64 2.3421999999999992e-104 326955000.0 5175.24 5561.67 5105.32 4798.93 7514.2300000000005 4972.83 4930.15 4855.33 7295.080000000001 8238.960000000001 8362.4 True False 6048.693989529923 5844.735247186738 5829.331144121504 5974.6680654321535 6408.896721040293 5499.051569902605 5825.894438104729 5543.587896324508 5642.756027848952 6377.773213793772 6285.7852895011065 0.9622813556219956 0.9298337404156906 0.9273831153377129 0.9505046370914706 1.019585688322001 0.8748392311597802 0.9268363728292605 0.8819244757824832 0.8977010457665201 1.0146342771914767 1.0 12.617877277915143 -10.93828380657416 1.2375982379107704 0.9994226419574436 0.9272387324550587 0.36508871928869946 0.03856434778903373 0.4442328091349265 1.2247001494309542 0.026555563176200097 0.00644065373565069 1.1526997352869077e-11 10.93828380657416 -0.07218390950238485 EDPQARPLEGSSSEDSPPEGQAPPSHS(ph)PR ddPTM_A549_PD325901_60min_R1 4 EDPQARPLEGSSSEDSPPEGQAPPSHSPR 29 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 EDPQARPLEGSSSEDSPPEGQAPPS(0.427)HS(0.573)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.051)HS(0.949)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.374)HS(0.626)PR;EDPQARPLEGSSSEDSPPEGQAPPS(0.324)HS(0.676)PR 230.11 8.177599999999999e-105 366075000.0 6709.77 6627.09 6781.210000000001 7190.75 8232.1 6302.51 6852.620000000001 6921.4 7403.150000000001 8367.98 8470.58 True False 7390.9409109283915 7185.578132074379 7241.423689328374 7634.906296121857 7653.905695203271 6251.184448150529 7113.400203997549 6783.34724726674 7092.021350647613 7839.624314711603 7428.752359430717 0.9949101212864736 0.9672658051324553 0.9747832932047424 1.0277508155766466 1.0303083646995883 0.8414851035133404 0.9575497822278554 0.9131206586332573 0.9546719297547148 1.0553083391936318 1.0 12.858904218709474 EDQEAAELLS(ph)EPEEESER ddPTM_A549_MK2206_60min_R1 5 EDQEAAELLSEPEEESER 18 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EDQEAAELLS(1)EPEEESER;EDQEAAELLS(0.999)EPEEES(0.001)ER;EDQEAAELLS(0.902)EPEEES(0.098)ER;EDQEAAELLS(1)EPEEESER;EDQEAAELLS(1)EPEEESER 186.23 8.7414e-40 84636930.0 244.34 395.01 556.6 873.47 947.47 982.81 960.31 1030.27 1454.63 752.88 640.88 True False 285.5786184605433 415.1143217758755 635.5342495314746 1087.4701892115581 808.0984181059194 1086.8103018635215 1134.7858965460186 1176.3139275695476 1125.1586275667873 582.8038851021313 481.7318086118185 0.5928166115571242 0.8617125013440339 1.3192698471850148 2.2574182766657334 1.677486110860262 2.2560484535894076 2.3556382955405666 2.441844002286812 2.335653588682671 1.2098098458176696 1.0 8.912086377580534 -5.888927852223866 2.7453860923664695 1.8346142929033566 0.683399470735684 0.4974937605600831 0.4679998822119718 0.23276930103908902 3.463062068609417 0.08491896142775159 0.3402133228723169 1.2914337970335956e-06 5.888927852223866 -1.1512148221676726 EDQEAAELLS(ph)EPEEESER ddPTM_A549_PD325901_60min_R1 4 EDQEAAELLSEPEEESER 18 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EDQEAAELLS(1)EPEEESER;EDQEAAELLS(0.999)EPEEES(0.001)ER;EDQEAAELLS(1)EPEEESER;EDQEAAELLS(0.991)EPEEES(0.009)ER 166.76 8.818300000000001e-24 121916600.0 703.22 954.22 367.64 524.9100000000001 1167.74 532.12 615.3100000000001 813.8699999999999 934.36 961.16 746.87 True False 774.6103767167975 1034.6354682353815 392.59026119891365 557.3324985428958 1085.7219708843027 527.786591143824 638.7259587605517 797.6367243813365 895.0920985244256 900.4721935674078 655.0097247990121 1.182593704169025 1.579572682761094 0.5993655457854139 0.8508766777682754 1.6575661853225971 0.8057690919104656 0.9751396575929357 1.217747911492595 1.3665325332369411 1.3747462968488218 1.0 9.35537251598994 -8.323559463467245 24.940085896035985 1.1812707319048308 1.0940680049151839 0.03709038144768928 0.3116173368655933 1027.6273800020974 412571.0909864987 0.05176600570009013 0.06258205552980797 4.7472328752466616e-09 8.323559463467245 -0.08720272698964693 EDQTEYLEER ddPTM_A549_MK2206_60min_R1 2 EDQTEYLEER 10 0 P08238;Q58FF7;Q58FF6;G3V2J8;P07900;P07900-2 P08238;G3V2J8;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha 0 ; 201.84 4.3731e-19 30854000.0 7768.7 7947.9 7781.5 6654.3 9762.2 8746.2 7689.7 8963.0 11744.1 10750.4 10557.1 False True 9079.866633520593 8352.414161774344 8885.033709538575 8284.603798722874 8326.193311908146 9671.717078742317 9086.81895291096 10233.532698036293 9084.080101473983 8321.877173522942 7935.48070886255 1.1442112918729628 1.0525404154087543 1.1196591656527548 1.0439952036516722 1.0492361606536624 1.2187941012748846 1.1450873975111004 1.2895920327305717 1.1447422575583412 1.0486922568192818 1.0 12.95410190473402 -10.598299962129206 1.0515239995802206 1.0052330690276237 1.1323407953419444 0.2529627022464298 0.07127473245270365 0.47785706287213686 0.9947747519253354 0.040658624441862766 0.013113233808128098 2.5217384355423386e-11 10.598299962129206 0.12710772631432077 EDQTEYLEER ddPTM_A549_PD325901_60min_R1 2 EDQTEYLEER 10 0 P08238;Q58FF7;Q58FF6;G3V2J8;P07900;P07900-2 P08238;G3V2J8;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha 0 ; 223.31 1.7491999999999995e-34 40018000.0 11515.2 12088.099999999999 11921.2 11472.599999999999 13338.1 9479.400000000001 11666.099999999999 10919.0 12026.4 11399.2 13439.7 False True 12684.214626957808 13106.806610190644 12730.244319999145 12181.236445834951 12401.277869947 9402.202909285053 12110.059819434862 10701.211979210211 11520.97223093256 10679.452566600356 11786.702101277713 1.0761461957694511 1.111999480225247 1.0800514181671859 1.0334728358422216 1.0521414525783819 0.7976958124924381 1.0274341130690066 0.907905526690979 0.9774551127141539 0.9060594282299432 1.0 13.524872490768677 -7.022738696016014 24.988188535333 0.971569506196142 1.073917220637619 0.48105489513298083 0.06443398670752506 584.3074488413656 642111.3473314678 0.008795426509172396 0.015311261035221157 9.489892743597512e-08 7.022738696016014 0.10234771444147706 EDRFS(ph)APPSR ddPTM_A549_MK2206_60min_R1 2 EDRFSAPPSR 10 1 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 EDRFS(0.997)APPS(0.003)R;EDRFS(1)APPSR 58.32 0.003187 5333400.0 801.19 737.53 722.2 661.1 742.55 857.4499999999999 514.62 980.8499999999999 1263.67 1059.55 1092.52 True False 936.4112847851461 775.0671267546682 824.6188196400129 823.069529677907 633.3218786500368 948.184789870755 608.1197926508235 1119.888491227145 977.4507626663291 820.196919110566 821.2171319819371 1.1402724667046313 0.9438029195568657 1.0041422512093314 1.0022556734678676 0.7711990580634488 1.1546091197371788 0.7405103583058217 1.363693531970516 1.190246433738341 0.9987576819434966 1.0 9.681619914600159 -8.255628220729552 24.998934874763098 1.1128879090336101 0.9671686489658491 0.22540294682648265 0.15156104670088355 639.9250569953418 2752884.398763705 0.023845881263319185 0.030369814386665302 5.55100705469025e-09 8.255628220729552 -0.14571926006776104 EDRFS(ph)APPSR ddPTM_A549_PD325901_60min_R1 1 EDRFSAPPSR 10 1 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 EDRFS(0.994)APPS(0.006)R 44.457 0.01575 2954400.0 1172.7 736.95 711.19 719.86 578.65 692.59 700.22 716.89 593.89 631.47 821.26 True False 1291.7516407038886 799.0553628262497 759.4556301328887 764.3241172793216 538.0076202341286 686.9497766674824 726.8672552750866 702.5910665606747 568.930868608107 591.5988764326555 720.2502263960753 1.7934762022463246 1.1094135531542872 1.0544330321602062 1.0611924707108797 0.7469732053069442 0.9537654435803252 1.0091871250247584 0.9754819100526189 0.7899072402307642 0.8213796466164904 1.0 9.492354398641917 -2.4357767396652927 0.9177004060511035 0.9120698998030335 199.9999999319083 0.8717836609876796 0.09548118421364668 101.53162524354745 0.4842776634745982 0.01565232331691084 41990.14051447101 0.003666259998088822 2.4357767396652927 199.08793003210525 up EDRPIS(ph)FYQLGSNQLQSNAVSLAR ddPTM_A549_MK2206_60min_R1 4 EDRPISFYQLGSNQLQSNAVSLAR 24 1 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 EDRPIS(1)FYQLGSNQLQSNAVSLAR;EDRPIS(1)FYQLGSNQLQSNAVSLAR;EDRPIS(0.999)FYQLGSNQLQSNAVSLAR;EDRPIS(0.999)FY(0.001)QLGS(0.001)NQLQSNAVSLAR 185.38 7.7397e-51 19040400.0 3088.51 3309.21 3636.51 3046.93 4953.070000000001 3017.2500000000005 2737.05 3188.0899999999997 4948.799999999999 4161.98 4815.91 True False 3609.77498118021 3477.634654221273 4152.221799791059 3793.4279867818846 4224.4799642921525 3336.5333923115463 3234.336556050944 3640.011520616147 3827.904701609697 3221.785827379352 3619.986634645708 0.9971790908375834 0.9606761033142966 1.1470268315500125 1.047912152624053 1.166987724170315 0.9216977102563519 0.8934664357863001 1.0055317568796491 1.0574361421597729 0.8899993708663712 1.0 11.821768655405387 -7.273953564013614 24.94500684150808 1.0082278472357171 1.0619422731038017 0.18124776436784784 0.07980198728569583 1369.7055444888103 2730284.374727449 0.011438904081693565 0.018355736166335377 5.3216515681888436e-08 7.273953564013614 0.053714425868084614 EDRPIS(ph)FYQLGSNQLQSNAVSLAR ddPTM_A549_PD325901_60min_R1 2 EDRPISFYQLGSNQLQSNAVSLAR 24 1 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 EDRPIS(1)FYQLGSNQLQSNAVSLAR;EDRPIS(1)FYQLGSNQLQSNAVSLAR 246.53 4.542299999999999e-100 46659000.0 3213.6000000000004 2576.7 2635.7 3104.8 4069.6 3316.3 3844.5 3515.2 4040.9 3356.5 3478.0 True False 3539.8423062727156 2793.8475519294375 2814.5744517516487 3296.5764444875913 3783.7653353578353 3289.2931523157604 3990.804551291123 3445.0865783789477 3871.0750256082797 3144.570017176126 3050.2280488585225 1.1605172628313545 0.9159471053238037 0.9227423021058829 1.0807639270517033 1.2404860471904133 1.0783761409402495 1.3083626821884973 1.1294521338062549 1.2691100349224511 1.0309294802901405 1.0 11.574701393782862 -6.517812283200232 23.703420612421176 1.1472491266574318 0.993089416855768 0.27310215677748506 0.108168767569266 121.23818009283968 567209.1333420603 0.017340457008545574 0.03696936794738881 3.035202818273643e-07 6.517812283200232 -0.15415970980166382 EDRRS(ph)EEK ddPTM_A549_PD325901_60min_R1 2 EDRRSEEK 8 2 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 EDRRS(1)EEK;EDRRS(1)EEK 57.348 0.0055423 10403900.0 2487.3 2652.5 2207.6000000000004 2030.0 2612.7 1855.55 957.96 1947.29 1871.3400000000001 2458.9 2706.7 True False 2739.8088649465176 2876.03548394956 2357.4210113772224 2155.388489535497 2429.1929653256852 1840.4390160056407 994.4156920158265 1908.449773330547 1792.6940875601472 2303.644634361502 2373.793059184982 1.1541902754940243 1.2115780155398288 0.993103001230705 0.9079934247830043 1.0233381363747538 0.7753156952264141 0.4189142301887297 0.8039663634309361 0.7552023461453925 0.9704488036343131 1.0 11.212978454898561 -6.094719430780944 1.176107649095031 0.8376846725924663 1.2090488085628053 0.4385660104909618 0.15596553696152718 0.5109805537630012 1.1684103784260844 0.026569709219335897 0.15954174372355293 8.040453954994644e-07 6.094719430780944 0.371364135970339 EDS(ph)APPSSVAR ddPTM_A549_MK2206_60min_R1 1 EDSAPPSSVAR 11 0 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 EDS(0.91)APPS(0.089)S(0.001)VAR 164.04 1.1029000000000002e-13 7406200.0 1647.9 1629.6 1695.9 1618.6 2011.2 1547.5 1609.1 1663.1 2466.2 2626.9 2764.6 True False 1926.0252327131418 1712.5396794156268 1936.4041210571831 2015.157072661715 1715.3551442205307 1711.255422852637 1901.4526414722322 1898.8495180301416 1907.6096377121407 2033.4814655387165 2078.073520921598 0.9268320939188788 0.8240996587339884 0.9318265699273304 0.969723665873005 0.8254545024277069 0.8234816553043406 0.915007396191143 0.9137547343310678 0.9179702346941705 0.9785416372741684 1.0 11.021030981441582 -9.986398247898572 0.5368144606356192 1.0033423592289086 0.8861637357835548 0.3943517645508483 0.04646602457775087 0.6682469550977639 0.37518160327941247 0.03559336557879001 0.012190985942511211 1.0318147979742563e-10 9.986398247898572 -0.11717862344535379 EDS(ph)APPSSVAR ddPTM_A549_PD325901_60min_R1 4 EDSAPPSSVAR 11 0 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 EDS(0.961)APPS(0.019)S(0.019)VAR;EDS(0.996)APPS(0.002)S(0.002)VAR;EDS(0.824)APPS(0.175)S(0.001)VAR;EDS(0.584)APPS(0.388)S(0.029)VAR 160.67 2.1341e-13 22603500.0 5217.26 5611.33 5844.870000000001 5962.3 6387.549999999999 5713.13 5727.72 5519.41 5300.57 5698.5 6871.8 True False 5746.912394456184 6084.21647206435 6241.538026258551 6330.577729634235 5938.910523851218 5666.6041634622125 5945.691518928649 5409.3210376566185 5077.8054761287 5338.6957374879075 6026.61216392927 0.9535892203007261 1.0095583234109298 1.035662799676353 1.0504372203547911 0.9854476051067353 0.940263618982852 0.9865727803947714 0.8975724487520057 0.8425638381909812 0.8858535429642033 1.0 12.557131509371574 -7.432103746611296 1.4834142659899459 0.9240310584204986 1.0131405836120975 0.44579473836005634 0.04646993651154519 0.3952684987748054 1.719813322100414 0.010282203125345593 0.018705864870037454 3.6973984377888985e-08 7.432103746611296 0.08910952519159887 EDS(ph)ARPGAHAK ddPTM_A549_PD325901_60min_R1 1 EDSARPGAHAK 11 1 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 1 EDS(1)ARPGAHAK 49.298 0.01208 2584500.0 1064.6 777.18 873.03 864.68 987.4 897.95 663.91 819.76 831.6 1136.2 962.75 True False 1172.6774082829022 842.6756861134473 932.279065755868 918.0893197692385 918.0484303450771 890.6373929143732 689.1754583554917 803.4092437107204 796.6507439668999 1064.460138094895 844.3378533750839 1.3888722430190021 0.9980313955426819 1.1041540563759584 1.0873482884835102 1.087299860684143 1.0548353237441808 0.8162318621635175 0.9515257908895604 0.9435212939730658 1.260704034338758 1.0 9.72167658427326 -7.5306843430155 24.64539797150642 0.9588967147373636 1.1164393388460359 0.1659843605098804 0.1360172406669437 123.49727483075458 389928.7757028498 0.014555777975350022 0.02161279851182416 2.9465624970633272e-08 7.5306843430155 0.15754262410867226 EDS(ph)PSASGR ddPTM_A549_PD325901_60min_R1 1 EDSPSASGR 9 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EDS(0.5)PS(0.5)ASGR 76.22800000000001 0.0020095 8413500.0 486.69 588.71 662.25 455.55 408.87 414.05 400.26 455.64 457.1 736.05 346.23 True False 536.0984105177582 638.322657777925 707.1942674327614 483.68828887088466 380.1523817249254 410.6781140778402 415.49211333067615 446.55190275733463 437.8896766080682 689.5756773849213 303.6459049328022 1.7655380883084806 2.1021941920118694 2.3290097312172406 1.5929353270149533 1.2519595211042098 1.3524902111514547 1.3683442015219205 1.4706337069033024 1.442106313618735 2.2709862579491285 1.0 8.246246102440477 -2.0000000000000306 0.13471168927006194 0.9079681132535018 5.007745019408894 0.0 0.42652268830326145 34.95393366073174 0.30325302808029136 0.6301398285000457 27.59882382030699 0.009999999999999294 2.0000000000000306 4.099776906155392 EDSAPPSS(ph)VAR ddPTM_A549_MK2206_60min_R1 1 EDSAPPSSVAR 11 0 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 EDS(0.184)APPS(0.263)S(0.553)VAR 125.74 2.5814e-06 6840600.0 1960.0 2063.4 1517.8 1515.7 2129.7 1732.2 1389.8 1720.8 2257.2 2905.8 2618.0 True False 2290.8000826007396 2168.418246506018 1733.0468629875531 1887.0465680423579 1816.4239511965304 1915.500254258698 1642.308670137411 1964.7286697289803 1745.9478040077202 2249.3777618342547 1967.878346875766 1.1640963915465858 1.1019066549254084 0.880667682399659 0.9589244025364992 0.9230367080771599 0.9733834702230327 0.8345580267930512 0.998399455356686 0.8872234438574995 1.1430471631569104 1.0 10.942425321505986 -5.638825604718514 5.032136450712323 0.9396038036191118 1.1490734927699218 0.4261582903355864 0.07871605275821054 0.08322674007737996 3.224569399527111 0.007279563685101265 0.030109195651445434 2.297070874659342e-06 5.638825604718514 0.20946968915081 EDSGLFS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 EDSGLFSPIR 10 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 EDSGLFS(1)PIR;EDS(0.001)GLFS(0.999)PIR 103.08 0.00038151 53490000.0 1289.96 1478.13 1380.23 818.38 1578.5900000000001 1103.1100000000001 1199.19 1036.76 1578.3000000000002 1685.2 1558.8000000000002 True False 1507.6737115059432 1553.360503396306 1575.9673683629671 1018.8831367384745 1346.3815021455273 1219.8403680148444 1417.0673004332152 1183.723904944339 1220.8175700271952 1304.5121495777696 1171.706939308611 1.2867327664676766 1.3257244207437204 1.3450183791630508 0.8695716501770372 1.1490770063544955 1.0410797504832014 1.2094042058583214 1.0102559481663724 1.041913749138981 1.113343367538237 1.0 10.19439606084242 -6.242448481792112 24.89964807058443 1.0357576795985928 1.3198151545276786 0.6514562873981562 0.08548869259197991 308.9044775699593 405015.1509150344 0.010864205472397874 0.028691940903935037 5.722048284571572e-07 6.242448481792112 0.28405747492908584 EDSGLFS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 EDSGLFSPIR 10 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 EDS(0.044)GLFS(0.956)PIR;EDSGLFS(1)PIR 90.913 0.00065198 57381000.0 2427.09 2410.04 2608.6000000000004 2908.6 3349.8 2819.3 2825.3 3560.6000000000004 3450.6 3583.8999999999996 3972.2 True False 2673.486390070778 2613.1425288361147 2785.6352827861124 3088.257616090122 3114.5216041826393 2796.3405555359363 2932.818337563484 3489.581039763336 3305.5832817847304 3357.6119423677997 3483.64458185044 0.7674394810536835 0.7501174323151151 0.7996324588619315 0.886501921631082 0.8940411488614806 0.8027054683203584 0.8418821922429387 1.0017040940237774 0.948886490604295 0.9638216136803215 1.0 11.766381725430655 -6.10385481817943 0.22055820724665026 1.0183366403449086 0.6028348401373406 0.730382898730515 0.04553659381381759 2.837100405471831 0.15948303730793265 0.04345279718520558 0.3220528967018564 7.873089379654316e-07 6.10385481817943 -0.415501800207568 EDSGSS(ph)SPPGVFLEK ddPTM_A549_MK2206_60min_R1 1 EDSGSSSPPGVFLEK 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDS(0.013)GS(0.089)S(0.789)S(0.108)PPGVFLEK 76.58800000000001 0.00060828 1802400.0 1672.3 2455.2 2066.1 1724.2 2522.0 1952.1 1797.8 2010.8 2981.9 2969.8 3200.2 True False 1954.5433561904151 2580.15919299291 2359.1040477128645 2146.6290774022787 2151.0171408731976 2158.6699263008923 2124.436988899869 2295.8370578167337 2306.504411115819 2298.920117384323 2405.502018973195 0.8125303328677834 1.0726073695395477 0.9807117304852083 0.8923829871980661 0.8942071650355022 0.8973885323207234 0.8831574333106149 0.9544107798324474 0.9588453441000919 0.9556924497471978 1.0 11.232122294957879 -9.271891329805628 1.0077848976731758 0.9901434549581883 0.9259504937248586 0.09986550384619797 0.06343779400648593 0.6220573337205002 1.3284742844075972 0.016123176179497687 0.013168218744342835 5.346981360939538e-10 9.271891329805628 -0.06419296123332974 EDSGSS(ph)SPPGVFLEKDYEIYR ddPTM_A549_MK2206_60min_R1 2 EDSGSSSPPGVFLEKDYEIYR 21 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDS(0.003)GS(0.078)S(0.459)S(0.459)PPGVFLEKDYEIYR;EDS(0.003)GS(0.082)S(0.458)S(0.458)PPGVFLEKDYEIYR 92.426 5.9509e-07 10484600.0 2848.3999999999996 2616.8 3216.8 2609.09 3869.0 3675.4 3543.5 3386.0 4866.2 4642.299999999999 4423.7 True False 3329.1402833060947 2749.983942743505 3672.990610659088 3248.3171671265027 3299.8752252333084 4064.3283884669336 4187.308082193063 3865.9758691901034 3764.0134697246026 3593.601205782626 3325.1732020910326 1.0011930449856168 0.8270197597569292 1.104601290648358 0.9768866070145762 0.9923919822155983 1.2222907323778154 1.259275179879315 1.1626389466747138 1.1319751606796318 1.080726021586723 1.0 11.699213774536021 -5.776119350895523 24.886146788034182 1.0857215209249886 0.9141063984683676 0.35762092637963006 0.09548009393079492 186.1137926159646 315510.1958365479 0.014722624817277706 0.046059610568696494 1.6744826388500176e-06 5.776119350895523 -0.17161512245662103 EDSGSSS(ph)PPGVFLEK ddPTM_A549_MK2206_60min_R1 1 EDSGSSSPPGVFLEK 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDS(0.017)GS(0.013)S(0.032)S(0.938)PPGVFLEK 73.887 0.0007585 1887000.0 1581.8 1754.0 1928.7 1805.2 2451.5 2088.5 1405.7 1991.9 2957.0 2164.1 2584.9 True False 1848.7691687029828 1843.2711080602655 2202.218661644549 2247.474081038508 2090.887597482412 2309.5036837659013 1661.0974943244778 2274.25792493791 2287.244221358689 1675.2283069672746 1942.997990389291 0.9515033869554188 0.9486737079388102 1.1334127325593997 1.1567042746082374 1.0761141328115786 1.188628961630155 0.8549146744056422 1.1704890772852776 1.177172715912293 0.8621873595616188 1.0 10.92406869343048 -5.750380016399707 24.633890921920084 1.0896125249986703 0.9500884300898612 0.11659641277737987 0.1149915929272737 198.845042015621 442901.3336030806 0.013330041984515373 0.050619871760610155 1.7767240603972886e-06 5.750380016399707 -0.13952409490880913 EDSGSSS(ph)PPGVFLEK ddPTM_A549_PD325901_60min_R1 2 EDSGSSSPPGVFLEK 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDSGSS(0.011)S(0.989)PPGVFLEK;EDS(0.005)GS(0.039)S(0.384)S(0.572)PPGVFLEK 138.77 4.745899999999999e-10 7336200.0 8074.400000000001 8921.1 9177.2 9228.900000000001 11038.1 9550.900000000001 8112.0 9958.0 9105.1 11141.0 10307.400000000001 True False 8894.107143940879 9672.912405603169 9800.019978986704 9798.94819264737 10262.821935377751 9473.120636990801 8420.70659905673 9759.379878100126 8722.444310838162 10437.555358665051 9039.655143992053 0.9838989432967574 1.0700532544133603 1.0841143630904997 1.0839957981317419 1.1353112228179014 1.047951551922513 0.9315296286112541 1.0796186052060202 0.9649089674217588 1.1546408787067581 1.0 13.142052020627505 -7.542560134268051 17.723927875668224 0.9882800441071194 1.0746773031729127 0.0 0.06877981434217649 5.871436039614075 5287.050526449987 0.006928359158570848 0.010281960061062908 2.8670803599089585e-08 7.542560134268051 0.08639725906579321 EDSGSSS(ph)PPGVFLEKDYEIYR ddPTM_A549_PD325901_60min_R1 2 EDSGSSSPPGVFLEKDYEIYR 21 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 EDS(0.001)GS(0.03)S(0.224)S(0.745)PPGVFLEKDYEIYR;EDS(0.001)GS(0.022)S(0.156)S(0.821)PPGVFLEKDYEIYR 115.11 4.2446e-15 17178000.0 6102.9 7135.8 6370.7 6355.0 7472.799999999999 6948.4 7136.299999999999 7668.0 7675.3 8280.400000000001 7737.5 True False 6722.46191528248 7737.158909092275 6803.05401213121 6747.533916747822 6947.936307760469 6891.814534134675 7407.875801633199 7515.055724570374 7352.733832574726 7757.574130858095 6785.8365520537145 0.9906607481207229 1.140192347655448 1.0025372641892303 0.9943555028164803 1.02388795463364 1.0156175264859404 1.0916672903639606 1.1074619417846077 1.0835412518666458 1.143200852444683 1.0 12.728310965465264 EDSLRGT(ph)PAR ddPTM_A549_PD325901_60min_R1 1 EDSLRGTPAR 10 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 EDS(0.029)LRGT(0.971)PAR 47.915 0.030348000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EDTDHEEKAS(ph)NEDVTK ddPTM_A549_MK2206_60min_R1 2 EDTDHEEKASNEDVTK 16 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 EDTDHEEKAS(1)NEDVTK;EDTDHEEKAS(1)NEDVTK 120.75 4.037e-08 40516000.0 3087.1 3364.3999999999996 3323.1 2633.3 3846.0 3176.5 3025.2 3794.3999999999996 4769.2 4575.0 4419.1 True False 3608.1270076513965 3535.6335894857234 3794.365549080209 3278.4586182133303 3280.2584947653936 3512.635121609953 3574.8396811769294 4332.267819862647 3688.983814847432 3541.504322524508 3321.7155090445767 1.0862239700621443 1.0643998800796386 1.1422909453710501 0.9869775449723301 0.9875193964786264 1.0574762083163136 1.0762028450188255 1.304226026601759 1.110565852133584 1.0661672599238183 1.0 11.697712802493976 -7.7370481348783 6.307286973731259 1.0780970152462948 1.052401860292275 0.04249505081266458 0.0832880298722131 0.8466998989528637 110.51355420116613 0.014763592602217351 0.0216203972042093 1.8321113496915576e-08 7.7370481348783 -0.02569515495401986 EDTDHEEKAS(ph)NEDVTK ddPTM_A549_PD325901_60min_R1 2 EDTDHEEKASNEDVTK 16 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 EDTDHEEKAS(1)NEDVTK;EDTDHEEKAS(1)NEDVTK 147.25 7.4165e-15 82021000.0 6298.0 5245.8 5585.0 5938.6 7171.5 6058.0 5362.2 5590.2 6042.799999999999 6858.200000000001 6302.2 True False 6937.368323657446 5687.881976136701 5964.031685333298 6305.41383446084 6667.798580331904 6008.665656523499 5566.261455308429 5478.699075572936 5788.842130403057 6425.172081572267 5527.069352937376 1.255162162922845 1.0290954596243416 1.079058594074579 1.1408240844869824 1.2063895266282998 1.0871341162618446 1.0070909373247188 0.9912484764934724 1.047361949118037 1.162491669867973 1.0 12.43229900007486 -7.589856566657963 4.505810716738299 1.019338682423723 1.1336068761639062 0.28166168949877146 0.07183573519021419 0.13923058354139364 5.594758082154268 0.008669271130082881 0.013079672777043623 2.571244841094791e-08 7.589856566657963 0.11426819374018327 EDTEEHHLR ddPTM_A549_MK2206_60min_R1 2 EDTEEHHLR 9 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;A0A2R8Y4L2;Q32P51;F8VYN5;P22626;P22626-2;A0A087WUI2 F8W6I7;P22626 HNRNPA1;HNRNPA1L2;HNRNPA2B1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 135.71 4.8516e-05 34346000.0 1426.59 1165.28 1158.71 1135.09 1507.93 1507.21 1198.28 1478.25 1719.8799999999999 1627.99 1828.6399999999999 False True 1667.3635152231564 1224.5877746866975 1323.0325013916913 1413.187100956126 1286.1154945427925 1666.7019617949743 1415.9919652124458 1687.7964644507588 1330.329926083997 1260.22592831184 1374.5382201034763 1.213035396787756 0.8909084933225863 0.9625287111275032 1.0281177200367264 0.9356709589682946 1.212554105384937 1.030158306624496 1.2279007158663804 0.9678377120600172 0.916835857948693 1.0 10.42473130732753 EDTEEHHLR ddPTM_A549_PD325901_60min_R1 2 EDTEEHHLR 9 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8VZ49;A0A2R8Y4L2;Q32P51;F8VYN5;P22626;P22626-2;A0A087WUI2 F8W6I7;P22626 HNRNPA1;HNRNPA1L2;HNRNPA2B1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 153.24 1.8637e-05 21360200.0 2446.0 2481.2 2543.3999999999996 2212.5 3050.3 2176.18 2295.1000000000004 2276.63 2320.25 2968.6 3110.2 False True 2694.3161193499714 2690.299431772157 2716.0104187066595 2349.161100047925 2836.05745096373 2158.457911590179 2382.441286426911 2231.220828668315 2222.737961386723 2781.162089375553 2727.6651171822264 0.9877737931895739 0.9863012196128131 0.9957272253099726 0.8612351586893815 1.0397381383435649 0.7913207152863184 0.8734361382632104 0.8179966135187607 0.8148866762951051 1.0196127346631874 1.0 11.413450816327293 -7.247009742652629 24.90528159878813 0.8918261079895164 0.9697550036193484 0.23486406443989605 0.07850201170040326 1150.4409966526598 1985639.0710296927 0.012837562087929128 0.022171443477006437 5.66226586572415e-08 7.247009742652629 0.07792889562983196 EDTEEHHLRDYFEEYGK ddPTM_A549_MK2206_60min_R1 1 EDTEEHHLRDYFEEYGK 17 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 73.707 0.0012519 2914700.0 409.48 292.02 371.74 429.48 565.93 395.58 420.46 432.25 728.91 503.22 495.59 False True 478.59021317517903 306.88257068173266 424.45832181248704 534.7026192800901 482.682446682938 437.44001303524794 496.85213947760514 493.5227612101068 563.8130488300851 389.54225249853135 372.52132541182607 1.284732391215705 0.8237986653313629 1.1394201965303439 1.4353610996336141 1.2957176240832058 1.1742683792710487 1.3337548902155605 1.3248174736426497 1.5135054300764772 1.0456911481990687 1.0 8.541179206450867 -6.004076931634208 24.636896803657393 1.269624070199641 1.0361014917349258 0.1873062589689941 0.17415052081194105 188.73486343051607 1140561.2725001574 0.028217782355792018 0.08490307303084355 9.906564428477413e-07 6.004076931634208 -0.23352257846471525 EDVEVAES(ph)PLR ddPTM_A549_MK2206_60min_R1 4 EDVEVAESPLR 11 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR 140.16 3.6838000000000005e-09 219140000.0 3525.58 3061.8900000000003 3705.3199999999997 2930.98 3908.96 3310.69 3089.45 3481.13 4755.1900000000005 3952.58 4891.95 True False 4120.611711844651 3217.7271226104053 4230.790092479273 3649.070231576691 3333.957162168002 3661.0250183418393 3650.7630745114566 3974.590838013509 3678.1470574780606 3059.6894328139692 3677.1438040484736 1.1206011870702273 0.8750615407174834 1.1505642199310355 0.9923653862976819 0.9066703234443458 0.995616492972375 0.9928257552756103 1.0808907809473078 1.0002728349727532 0.8320831590663663 1.0 11.844369882560601 -4.9290023963865455 18.56896486551235 1.0015376798622122 3.5993392821214027 0.14281417152392317 0.08655830511961873 160.82589311024785 45595.17058263744 0.008343825905541998 1431.244248925018 1.1775994756456496e-05 4.9290023963865455 2.5978016022591905 EDVEVAES(ph)PLR ddPTM_A549_PD325901_60min_R1 4 EDVEVAESPLR 11 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR 142.08 2.9955e-11 298986000.0 4752.99 4389.35 4884.2 4591.54 5261.0199999999995 4555.88 4789.9400000000005 4519.849999999999 4121.71 5040.36 4758.21 True False 5235.510045833696 4759.255928925163 5215.671183080551 4875.148997656067 4891.504104733698 4518.778423777198 4972.223787855743 4429.698045996269 3948.488862332624 4722.1108094067795 4172.980334778355 1.2546213079894075 1.140493255925671 1.2498671847581513 1.1682655096708014 1.1721847965510497 1.082865976174606 1.1915282098063944 1.0615190321119854 0.9462035632962897 1.131591915267818 1.0 12.02686240656112 -8.46258106925746 3.0178317128013115 0.974745541460127 1.1769161173098088 0.48740306741626516 0.06637654064806124 0.0822950944649194 1.4836650154808384 0.008022654397380948 0.009597283144298387 3.4468225912184586e-09 8.46258106925746 0.2021705758496818 EDVSNFDDEFTSEAPILT(ph)PPREPR ddPTM_A549_PD325901_60min_R1 2 EDVSNFDDEFTSEAPILTPPREPR 24 1 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 EDVSNFDDEFTSEAPILT(1)PPREPR;EDVSNFDDEFT(0.001)S(0.01)EAPILT(0.989)PPREPR 199.03 1.1059999999999999e-61 28808000.0 3596.0 3285.0 3616.0 3274.4 3101.0 3264.9 3531.5 3052.0 3445.3 3712.2 4881.5 True False 3961.0632727647167 3561.8384787085015 3861.40350477443 3476.652251298045 2883.196457869234 3238.311736874147 3665.8931650109507 2991.1254657523177 3300.506022353486 3477.8110584719866 4281.1064463780585 0.9252428834410068 0.8319901696725904 0.9019639088958628 0.8120919894994423 0.6734699297908144 0.7564193456609455 0.8562957289026073 0.6986804703916899 0.7709469651579934 0.8123626688643345 1.0 12.06376799213164 -10.705604349726372 0.9672080551014072 0.9998572042605814 0.8000241256630218 0.03149816478414058 0.09115776101604657 0.38204581933670384 0.636294931288645 0.05220301029819717 0.01367939137751876 1.969679887245507e-11 10.705604349726372 -0.1998330785975596 EDVTKDADLS(ph)PVNASIIK ddPTM_A549_MK2206_60min_R1 2 EDVTKDADLSPVNASIIK 18 1 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 EDVTKDADLS(1)PVNASIIK;EDVTKDADLS(1)PVNASIIK 175.47 4.2052e-31 16370200.0 5506.700000000001 5849.200000000001 5985.0 5994.5 7455.5 5911.5 5006.1 5370.9 8052.599999999999 8912.2 8339.4 True False 6436.096334110965 6146.899296046813 6833.7629957705285 7463.152769103332 6358.805826241128 6537.051006263882 5915.643569992005 6132.241522691415 6228.698957359817 6898.9278302082885 6268.496824268818 1.0267367942491852 0.9806018042872362 1.090175713149164 1.19058092846268 1.0144068034975584 1.042841878926275 0.9437100689098663 0.9782634807997536 0.9936511307216553 1.1005713209423227 1.0 12.613903813148967 -7.344618127457366 2.4934448340802926 0.9920881621455979 1.0666859158236917 0.1426560974906227 0.062113171442659265 0.2907967439988323 3.533454682580658 0.008260867807772968 0.014220423760903394 4.522534333357858e-08 7.344618127457366 0.07459775367809374 EDVTKDADLS(ph)PVNASIIK ddPTM_A549_PD325901_60min_R1 2 EDVTKDADLSPVNASIIK 18 1 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 EDVTKDADLS(1)PVNASIIK;EDVTKDADLS(1)PVNASIIK 191.41 8.7995e-41 27148000.0 7542.4 8216.6 8276.7 8526.4 9282.0 7603.9 9608.6 8687.0 9022.2 9548.0 8778.8 True False 8308.09889557858 8909.041718160212 8838.406633840304 9053.05636314062 8630.064341161638 7541.97635946501 9974.260531027665 8513.730970180333 8643.02830954565 8945.137650528128 7699.063253398278 1.0791051615157832 1.1571591796219967 1.1479846759200392 1.1758646558910535 1.120923943228084 0.9795966225028829 1.2955161170581553 1.105813875009076 1.1226077803336292 1.16184753340997 1.0 12.910467208146443 -10.434934065962679 0.6654382541179187 0.9939008172808695 1.1350138982019322 0.0 0.08584823295410074 0.7391840051705937 0.5612310369806185 0.056436723337123455 0.014313250385343222 3.673380650639783e-11 10.434934065962679 0.14111308092106267 EDYDS(ph)VEQDGDEPGPQR ddPTM_A549_PD325901_60min_R1 2 EDYDSVEQDGDEPGPQR 17 0 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 EDYDS(1)VEQDGDEPGPQR;EDY(0.008)DS(0.992)VEQDGDEPGPQR 56.513999999999996 0.0092922 1470290.0 0.0 182.77 244.8 162.8 567.64 0.0 324.42999999999995 141.6 471.87 197.18 187.7 True False 0.0 198.17266933137077 261.41360010198576 172.8557862543739 527.7709246516908 0.0 336.7763611849079 138.77567691694892 452.038944872127 184.7300211490507 164.6140899283338 0.0 1.2038621324435046 1.5880390324776845 1.0500667733219446 3.206110272100405 0.0 2.0458537986118106 0.8430364434621977 2.746052571009724 1.1222005432795854 1.0 7.362944016419787 -5.403915925042782 2.2339473614490557 1.6999195554222737 1.9280053789506134e-19 0.17072190238091844 0.8735708126126941 0.5562758089442136 3.9313640052961256 0.12395382740326934 1.6390331953742943 3.945336723550969e-06 5.403915925042782 -1.6999195554222737 EEAATGGGS(ph)TGEADGK ddPTM_A549_MK2206_60min_R1 2 EEAATGGGSTGEADGK 16 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 1 EEAAT(0.004)GGGS(0.87)T(0.125)GEADGK;EEAAT(0.003)GGGS(0.829)T(0.168)GEADGK 90.444 1.0514000000000001e-05 4667000.0 1048.07 959.9100000000001 929.01 1067.69 1267.12 861.4 1093.56 1121.04 1263.42 1160.1 1509.37 True False 1224.9585931486515 1008.7653188928905 1060.7575874186764 1329.274097930426 1080.728326543714 952.5527762489573 1292.2456967300814 1279.9508530410137 977.257387267161 898.0326042755579 1134.5517725072089 1.0796850552193449 0.8891311470640542 0.9349574106032578 1.171629299025206 0.9525597268738543 0.8395851113466088 1.1389922681751137 1.1281555271933446 0.861359887621128 0.791530740189163 1.0 10.14790672904932 -8.7842003211953 24.965765570699197 0.9345310788564353 1.011031450338964 0.174580327866243 0.11447353435579445 435.62572813049 477822.1975963344 0.01944215616670818 0.02070459959074509 1.643613420807295e-09 8.7842003211953 0.07650037148252864 EEAATGGGS(ph)TGEADGK ddPTM_A549_PD325901_60min_R1 1 EEAATGGGSTGEADGK 16 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 1 EEAATGGGS(0.9)T(0.1)GEADGK 133.66 3.1362e-10 2493500.0 565.66 639.05 594.03 777.75 787.19 574.25 748.98 650.48 875.65 651.84 817.44 True False 623.0853867831169 692.90498624617 634.3444479925761 825.7898511015927 731.9004900580727 569.573498391981 777.4828437575817 637.505666108312 838.8494756549007 610.6827111562897 716.9000621791002 0.869138419222865 0.9665293990071719 0.884843622504946 1.151889774693992 1.0209240153130645 0.7944949769716811 1.0845065927241422 0.889253188471682 1.170106573997387 0.8518379944061509 1.0 9.485628207101248 -8.756643106884091 24.99393380555415 1.0803281036446377 0.9629309498860393 0.0 0.1240515025599654 144.22542334295883 751575.8891540113 0.018463187763233347 0.0206097521228091 1.7512852629943171e-09 8.756643106884091 -0.11739715375859838 EEAENTLQS(ph)FRQDVDNASLAR ddPTM_A549_MK2206_60min_R1 2 EEAENTLQSFRQDVDNASLAR 21 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 EEAENT(0.003)LQS(0.997)FRQDVDNASLAR;EEAENT(0.006)LQS(0.994)FRQDVDNASLAR 140.8 4.9832e-22 9944000.0 2061.59 2185.25 2193.9 2240.89 3618.3 2497.1 2646.05 2548.87 3639.8 2970.6000000000004 3090.48 True False 2409.535990963704 2296.4698910425864 2505.0280094270606 2789.908150597374 3086.0528631330267 2761.3414645591724 3126.803033974021 2910.180128086999 2815.391111566233 2299.5393968286994 2323.0285230911445 1.0372390898401231 0.9885672380753991 1.078345782037036 1.200978861372298 1.3284610294093857 1.1886816873366606 1.3460028591527287 1.2527526455915228 1.211948576429843 0.9898885760424546 1.0 11.181791152915357 -6.0214039838604325 4.420526404357178 1.1583872278457836 1.0151724084983096 0.2617457648618199 0.11013558998324592 0.2723408381191853 12.953107563887478 0.018265978510008638 0.054982645985998266 9.519102782501509e-07 6.0214039838604325 -0.14321481934747404 EEAENTLQS(ph)FRQDVDNASLAR ddPTM_A549_PD325901_60min_R1 2 EEAENTLQSFRQDVDNASLAR 21 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 EEAENT(0.023)LQS(0.977)FRQDVDNASLAR;EEAENT(0.003)LQS(0.997)FRQDVDNASLAR 114.21 4.5626000000000004e-15 10584600.0 3340.38 2857.67 2987.3 3134.0299999999997 3324.1 3023.2 3266.2999999999997 3572.6000000000004 3278.64 3512.5 3596.5 True False 3679.4929185422147 3098.495879893736 3190.0361420942077 3327.6119152014467 3090.6266835224524 2998.580061538765 3390.600833887942 3501.3416903495195 3140.8501625777244 3290.7201505529983 3154.1533000919144 1.1665548781141968 0.982354243784994 1.0113763785676644 1.0549937173644912 0.9798593757102387 0.9506767034599696 1.074963868683598 1.1100734039298241 0.9957823427561995 1.043297467645946 1.0 11.623037065243167 -5.255323042432808 24.639312482158203 1.009358104096764 1.1665549636739279 0.4421473615246452 0.04572747215161765 358.01342665451955 1442186.8773477192 0.006177250938323178 0.07769207317818351 5.554909112604264e-06 5.255323042432808 0.15719685957716378 EEAENTLQSFR ddPTM_A549_MK2206_60min_R1 2 EEAENTLQSFR 11 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 146.71 5.1211999999999995e-11 13212400.0 6052.9 6493.9 5769.299999999999 5061.299999999999 8310.8 6662.200000000001 7073.5 6970.5 8254.4 8216.7 6713.6 False True 7074.481540803064 6824.41177231047 6587.473492313931 6301.318727210391 7088.292329250186 7367.189581989557 8358.663389132951 7958.589721260961 6384.7915795682 6360.541763254013 5046.427834066132 1.4018790664252574 1.352325248018406 1.3053735650086786 1.2486691446716156 1.4046158118818937 1.4598820837696362 1.656352505966186 1.577073919007848 1.2652101227857426 1.260404779855742 1.0 12.30104680725065 -9.624463243376066 1.0902476453205794 1.051749663080302 1.4151392660278521 0.37792135452265363 0.13294637016575198 0.22801569900750224 0.560365695022703 0.03845783273993555 0.026701496883816293 2.3743063642544877e-10 9.624463243376066 0.36338960294755007 EEAENTLQSFR ddPTM_A549_PD325901_60min_R1 2 EEAENTLQSFR 11 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 144.55 6.6047e-11 22585000.0 13325.900000000001 12936.0 12915.1 12996.8 14947.9 12582.5 12662.7 12144.599999999999 14361.3 14651.0 15614.1 False True 14678.735557990909 14026.162118895949 13791.596350805376 13799.5828181256 13898.011071455521 12480.03229171458 13144.58597779532 11902.366425745606 13757.744503766025 13725.933359644705 13693.664685934975 1.071936248962465 1.0242811139740036 1.00715160383407 1.0077348273540987 1.0149226952906503 0.9113727097855011 0.959902719926856 0.8691878104749238 1.0046795229254348 1.002356467348209 1.0 13.741220970535869 -5.240810749525645 0.9073219577779689 0.9836917032480521 1.1194914636911812 0.31938544312784567 0.0439693313898871 2.51886280885149 1.4930502083812272 0.007313514694921226 0.3405737061519681 5.74366696769638e-06 5.240810749525645 0.13579976044312914 EEAENTLQSFRQDVDNAS(ph)LAR ddPTM_A549_PD325901_60min_R1 1 EEAENTLQSFRQDVDNASLAR 21 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 EEAENT(0.001)LQS(0.003)FRQDVDNAS(0.996)LAR 44.743 0.010626 3487700.0 1482.6 1439.1 1579.9 1807.4 1898.3 2027.5 1821.5 2267.8 1883.8 1664.5 1907.1 True False 1633.1124605675666 1560.3780075218883 1687.1215147104874 1919.0389930967779 1764.969956779481 2010.9887122154819 1890.8181792630457 2222.5669499453165 1804.6304370909631 1559.4031859346526 1672.538790102959 0.9764272555179629 0.9329398019078732 1.0087189156352128 1.1473808586398433 1.0552639898240161 1.2023569941189158 1.1305078186836253 1.3288582382047467 1.0789767315231433 0.9323569624586453 1.0 10.707823955403395 -6.026787422491646 5.58102371197179 1.0844706499853634 0.9574059557432046 0.2521186563407244 0.10084002207386587 0.21163386814534296 20.26728216205669 0.014524087696964472 0.041584223337758346 9.401833968568605e-07 6.026787422491646 -0.12706469424215872 EEAGET(ph)SPADESGAPK ddPTM_A549_MK2206_60min_R1 1 EEAGETSPADESGAPK 16 0 Q9UKY1 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 1 EEAGET(0.5)S(0.5)PADESGAPK 85.45700000000001 7.5481e-05 1344700.0 515.51 490.43 540.41 436.86 756.69 736.29 441.64 439.74 832.36 553.5 712.92 True False 602.5154849905645 515.3907922041029 617.0482640842689 543.8907196113909 645.3819033811817 814.2037190902536 521.8802713192447 502.0744916472697 643.8317890057887 428.4639655775549 535.8822884089653 1.1243429723707292 0.9617611989646053 1.1514623219145483 1.0149443849435713 1.2043352007347001 1.519370460082987 0.9738710955883751 0.9369118974577962 1.2014425610469892 0.7995486599298972 1.0 9.065772323706339 -4.87106688774298 19.253936742828817 1.1030444905369272 7.610438750904998 0.0 0.1834888846203533 7305.5367325305515 1087568.7938589414 0.021652060538306626 6526.899759388153 1.3456530877119503e-05 4.87106688774298 6.507394260368071 EEAGETS(ph)PADESGAPK ddPTM_A549_MK2206_60min_R1 1 EEAGETSPADESGAPK 16 0 Q9UKY1 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 1 EEAGET(0.421)S(0.577)PADES(0.002)GAPK 85.837 5.4855e-05 1479200.0 635.28 593.85 680.54 542.54 939.69 581.49 674.38 481.59 1060.2 752.51 1013.7 True False 742.4997328952028 624.0744284615673 777.0508052032876 675.462324355546 801.4628457998158 643.0228858381776 796.9061166838882 549.8568573075196 820.0663927915053 582.5174683591075 761.9703133032715 0.97444706169239 0.8190272213573493 1.0197914428380281 0.886468032366381 1.0518294896888272 0.8438949321405496 1.045849297237269 0.7216250393323017 1.0762445445366204 0.7644884035360836 1.0 9.573590980558341 EEAGETS(ph)PADESGAPK ddPTM_A549_PD325901_60min_R1 2 EEAGETSPADESGAPK 16 0 Q9UKY1 Q9UKY1 ZHX1 Zinc fingers and homeoboxes protein 1 1 EEAGET(0.126)S(0.874)PADESGAPK;EEAGET(0.163)S(0.837)PADESGAPK 127.71 5.8403e-10 2993300.0 1737.53 1239.77 1474.12 1551.69 2018.9899999999998 1717.1100000000001 1527.07 1235.09 1888.52 1830.44 1659.3899999999999 True False 1913.9227664980194 1344.249768873194 1574.1626478036724 1647.5343671563242 1877.1831075373777 1703.1264254660052 1585.1834844947675 1210.4551610406393 1809.1520719052046 1714.8657060151556 1455.2955497398912 1.3151436949285662 0.9236953752201437 1.0816790088343406 1.1320960662944324 1.2898981982545688 1.1702959070893948 1.0892519287770044 0.8317589930492038 1.243150968357293 1.1783625026006972 1.0 10.507096458307313 -11.203322371790378 1.6371346695277145 0.999868262635976 1.1309404149289857 0.0 0.147614821625915 0.7370179660403819 3.5493687163414185 0.10265879826217317 0.021305772043201693 6.261489090068194e-12 11.203322371790378 0.13107215229300972 EEAGGGIS(ph)EEEAAQYDR ddPTM_A549_PD325901_60min_R1 1 EEAGGGISEEEAAQYDR 17 0 A0A590UK93;A0A590UKC5;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0QZS6;M0R375 A0A590UK93 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed 1 EEAGGGIS(1)EEEAAQYDR 88.507 7.1709e-06 690330.0 408.02 249.37 254.35 369.96 392.37 225.35 0.0 139.06 283.15 0.0 223.6 True False 449.4418900315516 270.3852850640909 271.61172053080077 392.8115889598783 364.8112848030156 223.51482431455435 0.0 136.28633920954044 271.2501901806489 0.0 196.09861751718398 2.2919176877530374 1.3788230049117876 1.3850771819286265 2.0031328824919252 1.8603460311036994 1.1398082614986713 0.0 0.6949887813339519 1.3832335669417934 0.0 1.0 7.615435554432103 -7.309156731931621 6.332740770292691 1.0421584055936721 1.7512360093157724 0.4492165091068996 0.5272276474756352 0.19069998427430096 19.321071988299927 0.06984754174642534 0.11277035386517173 4.9073074505608123e-08 7.309156731931621 0.7090776037221003 EEAPAS(ph)PLRPLYPQIS(ph)PLK ddPTM_A549_MK2206_60min_R1 4 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 2 EEAPAS(1)PLRPLY(0.001)PQIS(0.999)PLK;EEAPAS(0.999)PLRPLY(0.006)PQIS(0.995)PLK;EEAPAS(0.996)PLRPLY(0.004)PQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK 86.006 1.0985e-05 29376800.0 5573.13 4922.46 3835.1099999999997 4557.51 7098.500000000001 5998.34 6756.35 5777.03 8783.0 7882.200000000001 7534.800000000001 True False 6513.738094053395 5172.992188473396 4378.986266116876 5674.100154594402 6054.320053326089 6633.080357424157 7983.891339389047 6595.941693912377 6793.664523568945 6101.605545574354 5663.701210099128 1.150085050821279 0.9133589496651531 0.7731668927570835 1.0018360686959848 1.068968829522722 1.171156477251395 1.4096596983528569 1.1645991639090956 1.1995096972020598 1.077317697249704 1.0 12.467529442371404 -6.781974277410107 2.8993885523254392 1.1325686840329003 0.9372713552605727 0.35308033922281745 0.127788175120014 0.27122596481353384 4.675475190248306 0.02119507834846359 0.04492303578594099 1.6520596442667596e-07 6.781974277410107 -0.19529732877232764 EEAPAS(ph)PLRPLYPQIS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 2 EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK 114.2 2.084e-14 66122000.0 7668.8 7185.8 7822.2 7548.799999999999 8510.3 6834.1 7199.700000000001 6819.1 7774.1 8004.5 8206.1 True False 8447.330930527822 7791.372584567295 8353.06153070977 8015.072231431314 7912.565886941168 6778.44535543863 7473.688523327011 6683.087701019541 7447.381612160987 7499.094503943486 7196.8017227538585 1.1737617980804185 1.082615984810809 1.1606630073328557 1.1136991875280322 1.099455868281643 0.9418691269494717 1.0384735902474191 0.9286191225596605 1.0348182288550314 1.0420037667890558 1.0 12.81314019623952 -7.084299447478898 5.5009231996400745 1.0067630848871947 1.128534744101283 0.7056104902884711 0.04141447110360927 0.09494986643560029 4.739080221091462 0.0056285276952560016 0.009901810047053008 8.235700649208953e-08 7.084299447478898 0.12177165921408828 EEAPAS(ph)PLRPLYPQISPLK ddPTM_A549_MK2206_60min_R1 4 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK 108.59 2.7333999999999996e-10 51103900.0 8239.900000000001 9790.4 8811.9 7638.55 12320.0 8907.2 9690.599999999999 9940.8 13266.0 12505.7 12393.099999999999 True False 9630.593673786645 10288.689541820544 10061.55992354725 9509.995092907535 10507.744320205315 9849.753991879168 11451.25658284184 11349.938842423211 10261.27218144889 9680.65368441414 9315.551237840353 1.033818979457337 1.1044638453629285 1.0800820763753156 1.0208730380095317 1.1279788014607444 1.0573452649660549 1.2292623689649322 1.218386175186182 1.1015206636153705 1.0391927903408138 1.0 13.185425426300132 -10.329267761783356 1.0380510496395796 1.0079778369948096 1.108417224640216 0.2146441782083569 0.06401355332518764 0.49174088288809426 1.039186328554192 0.029320204961930618 0.012244530829332915 4.685244270170098e-11 10.329267761783356 0.10043938764540639 EEAPAS(ph)PLRPLYPQISPLK ddPTM_A549_PD325901_60min_R1 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK 151.91 7.3002e-22 93731000.0 21409.0 20516.3 19154.0 19815.8 24719.0 18168.5 18871.9 20489.8 19563.0 21577.0 22082.0 True False 23582.425919527202 22245.28060296112 20453.905622358798 21039.776961052972 22982.822715920556 18020.54175974698 19590.080481599936 20081.11486506285 18740.835142165055 20214.62453764615 19366.05398933121 1.2177197240345814 1.1486738917084545 1.0561731178497638 1.086425607025769 1.1867581660456916 0.930522127516247 1.0115679989528141 1.0369234164133576 0.9677157335453785 1.043817421390151 1.0 14.241242401122367 -5.217873513090761 0.37288042800643406 0.9816918061713469 1.3763273224079715 0.5344684220530947 0.05872140559431683 2.8835938258064022 0.26260660108321293 0.014927415497318948 0.5119765619373055 6.055172040664151e-06 5.217873513090761 0.39463551623662463 EEAPASPLRPLYPQIS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 EEAPASPLRPLYPQIS(1)PLK;EEAPASPLRPLYPQIS(1)PLK 97.25299999999999 4.3776e-07 43355000.0 2619.8999999999996 2420.91 2509.2 2034.3999999999999 3051.1000000000004 2312.5 2381.7 2509.0 2734.8 2867.9 3177.4 True False 3062.075069594732 2544.123978457344 2865.042290557629 2532.828091327686 2602.28723176773 2557.2072150867334 2814.4240607758456 2864.658433490244 2115.3721665782014 2220.0393981569455 2388.3638882211835 1.2820806262798248 1.065216230660801 1.1995836583727064 1.0604866803668251 1.0895689909739312 1.0706941382333919 1.1783899742647612 1.1994229386979207 0.8856992759816419 0.9295230970061252 1.0 11.221806945275471 -8.761880755545832 24.999998725120044 0.9460246538169961 1.1366756508557465 0.6228570760819154 0.07076592536814708 5.966928759896384 337969.3489361192 0.012623565748144322 0.013848201761259097 1.7302913809727367e-09 8.761880755545832 0.19065099703875044 EEAPASPLRPLYPQIS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 1 EEAPASPLRPLYPQIS(1)PLK;EEAPASPLRPLYPQIS(1)PLK 131.37 4.2743e-17 50303000.0 5573.9 4944.4 4455.8 5088.299999999999 6368.4 6067.1 4906.4 5279.9 4603.0 6195.8 6143.0 True False 6139.758224711691 5361.081940373311 4758.197382902074 5402.59273463225 5921.105553787306 6017.6915491405925 5093.115736885097 5174.588252498576 4409.551917363681 5804.59613061816 5387.449943685427 1.1396408855562614 0.9951056615675806 0.8832002956202141 1.0028107529731338 1.0990553259297327 1.116983287463091 0.945366692985182 0.9604893421912266 0.8184859188403357 1.0774292459870862 1.0 12.395386844440196 -7.948704845125308 9.262657239148057 0.9171210989455607 1.0315357142854629 0.08139733257381176 0.09139439188209576 0.36890698720644893 62.89452870133765 0.014699056104513502 0.020314645057140354 1.1253695368924583e-08 7.948704845125308 0.11441461533990216 EEAQWT(ph)PTK ddPTM_A549_MK2206_60min_R1 1 EEAQWTPTK 9 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 EEAQWT(0.968)PT(0.032)K 100.69 0.00081036 7343600.0 4875.2 4862.0 3495.0 3403.6 6755.5 4294.8 4247.3 4737.8 7451.6 6615.0 7697.1 True False 5698.014572803635 5109.455032718935 3990.6435539211366 4237.48215279341 5761.7748989567335 4749.27288534249 5018.979432058303 5409.397658903979 5763.824497760028 5120.666905682974 5785.697640847002 0.9848448582199795 0.8831182253020282 0.6897428454862918 0.7324064297582374 0.9958651932099988 0.8208643417195953 0.867480422174904 0.9349603098360436 0.9962194458741588 0.885056085463417 1.0 12.498275215007276 -8.422583805669099 1.8176513631652509 0.9992702400156522 0.8452021786829989 0.1860261527479894 0.09261016131077783 0.2670147796259561 1.7206466374450218 0.015600597741059267 0.018997719279739173 3.77934200421364e-09 8.422583805669099 -0.15406806133265338 EEAQWT(ph)PTK ddPTM_A549_PD325901_60min_R1 2 EEAQWTPTK 9 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 EEAQWT(0.965)PT(0.035)K;EEAQWT(0.5)PT(0.5)K 96.229 0.00095083 23000400.0 16883.2 17068.9 13392.7 15178.5 16561.1 15665.7 12995.6 12302.599999999999 17827.2 16080.7 22866.8 True False 18597.17003524506 18507.356106309755 14301.609158847477 16116.041472125384 15397.905468693394 15538.123733146287 13490.154669465188 12057.21499179701 17077.984779757942 15065.361857650569 20054.328564588293 0.9273394507001214 0.9228609198609539 0.7131432554715942 0.8036190999973396 0.7678095738334936 0.7748014940068016 0.6726804453222109 0.6012275580787833 0.8515859668278326 0.7512274374646886 1.0 14.291626043894112 -9.684635648676968 1.1955723278133303 0.970175811140515 0.7763105961611608 0.0 0.11472394251579741 0.2985302871977003 0.8722933514159174 0.028032830732257864 0.01944824350001547 2.0671136333861633e-10 9.684635648676968 -0.19386521497935416 EEAS(ph)DDDMEGDEAVVR ddPTM_A549_MK2206_60min_R1 6 EEASDDDMEGDEAVVR 16 0 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 1 EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR 308.0 7.568499999999998e-144 351796200.0 26657.44 28418.870000000003 25517.469999999998 21965.71 56849.0 39294.53 32265.600000000002 34942.81 58117.81 32833.93 32363.590000000004 True False 31156.564160165442 29865.269096191936 29136.23094932071 27347.309936078185 48486.58740741493 43452.65108300199 38127.841867308736 39896.06032536759 44954.21883007177 25416.722408845264 24326.817413355624 1.2807497023042658 1.2276685679317696 1.1977000712524228 1.124163077783627 1.9931331987880747 1.7862036921914055 1.567317303346727 1.6400032789930146 1.8479284842821868 1.0448026133862982 1.0 14.57025996976823 EEAS(ph)DDDMEGDEAVVR ddPTM_A549_PD325901_60min_R1 8 EEASDDDMEGDEAVVR 16 0 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 1 EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR 315.08 2.421199999999999e-145 517885500.0 38094.07 38668.7 40401.23 37574.13 48327.909999999996 34774.21000000001 32086.390000000003 37046.979999999996 38355.29 41724.17 42394.57 True False 41961.35194302783 41927.447056814446 43143.10042013216 39894.998673059315 44933.52432383851 34491.020363112606 33307.455129796304 36308.048921106405 36743.35054541386 39089.6987855086 37180.306651321465 1.1285907977183518 1.1276788932918673 1.1603750562019306 1.0730142450732414 1.2085302239496585 0.9276690664918634 0.8958359446078556 0.9765397919281535 0.9882476465295081 1.051354932386478 1.0 15.182251048744885 -7.265768940469479 24.999807556280825 0.9804368281284185 1.1364242142204857 0.7476057888145327 0.04801669700518972 140.69502816359477 812402.6960184452 0.006655434400213861 0.010864485855092459 5.4228933015142465e-08 7.265768940469479 0.1559873860920672 EEASDYLELDTIK ddPTM_A549_MK2206_60min_R1 1 EEASDYLELDTIK 13 0 P14625;Q96GW1;A0A1W2PRR1 P14625 HSP90B1 Endoplasmin 0 79.65899999999999 0.0020632 841290.0 1552.8 1526.2 1990.0 1522.1 1832.1 1757.2 1533.2 1365.2 2819.8 2685.0 2661.9 False True 1814.8746776849127 1603.8770610727352 2272.2119234057395 1895.014568329665 1562.600516968194 1943.1457376650433 1811.7625939377458 1558.7212807496537 2181.119802295309 2078.4566351865124 2000.8767652974022 0.9070397083726229 0.8015871286477463 1.135608130802602 0.9470920954234768 0.7809579000913308 0.9711471347792986 0.9054843483418894 0.7790191319043938 1.090082028100874 1.038772937561489 1.0 10.966416598547786 -8.78551903300969 24.981361046093053 1.0425387425468486 0.9075227381792128 0.28625493163122273 0.09792366076881792 214.0640950154827 222079.09238898705 0.017079670270041192 0.01818712152444832 1.6386302465366215e-09 8.78551903300969 -0.13501600436763583 EEAT(ph)SPGAK ddPTM_A549_MK2206_60min_R1 1 EEATSPGAK 9 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 EEAT(0.667)S(0.333)PGAK 80.688 0.0017517 3169100.0 2111.0 1910.9 1484.4 1628.7 1297.2 994.54 576.84 1026.9 976.88 2720.0 2957.0 True False 2467.285191005184 2008.1566478861835 1694.9102407555165 2027.7315731151211 1106.3835983904492 1099.7815626777779 681.6443612620978 1172.4662197493549 755.6182397568062 2105.5501108779586 2222.6952909517345 1.1100420291747317 0.9034781582797667 0.7625472765678889 0.9122849998241855 0.49776665424827865 0.4947963704943394 0.3066746773779437 0.5274975047287374 0.3399558377762426 0.9472958886669456 1.0 11.11809446768107 -5.7517925175155 1.0246333337726363 0.6214075356622804 1.1414063705667599 0.3388368619588433 0.2200779956932918 1.129412571644194 1.4880229443628876 0.04238959723232088 0.5291148609688286 1.7709548229642846e-06 5.7517925175155 0.5199988349044795 EEATS(ph)PGAK ddPTM_A549_MK2206_60min_R1 1 EEATSPGAK 9 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 EEAT(0.339)S(0.661)PGAK 66.19 0.0054804 3445500.0 2152.7 1796.3 1439.8 1410.9 1174.6 875.22 646.77 974.33 966.97 2529.7 2576.3 True False 2516.023131538066 1887.723997382359 1643.985290110343 1756.5705633377086 1001.8178959832105 967.8351994759831 764.2797370735167 1112.444261260482 747.9528389337879 1958.239013047048 1936.533607737217 1.2992406232897584 0.9747953713997813 0.8489319697535701 0.9070694958866271 0.5173253342883141 0.49977712527636964 0.394663812711495 0.5744513066108575 0.3862328213388194 1.011208380388086 1.0 10.919260823619409 -5.456882540722636 0.9609157838369736 0.6491850887168911 1.4867004695502009 0.47316921565510994 0.21003626367094214 1.2468978644576916 1.0664712811548431 0.03895678297713314 1.0015706571289833 3.4923475673242335e-06 5.456882540722636 0.8375153808333098 EEATS(ph)PGAK ddPTM_A549_PD325901_60min_R1 2 EEATSPGAK 9 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 EEAT(0.037)S(0.963)PGAK;EEAT(0.019)S(0.981)PGAK 112.71 0.00026766 8649900.0 4362.1 4828.2 3864.4 3893.1000000000004 4293.1 3484.0 3244.24 3629.5 4348.9 4553.5 5215.4 True False 4804.937180791705 5235.089358569374 4126.661422524975 4133.567945128396 3991.5674663909736 3455.627459116519 3367.7013285162457 3557.106775212331 4166.13085670713 4265.9912328948285 4573.93886314455 1.0505031493771093 1.1445472961504097 0.9022117579612607 0.9037217306150432 0.872676173823364 0.7555036397536805 0.7362803546965154 0.7776900570041388 0.9108409581677148 0.9326734266758411 1.0 12.159221366977558 -5.769636238606591 24.89719929351065 0.9047543270085232 1.097525226138051 0.4746184676215963 0.0864194535955543 132.61504430027475 402811.59666542197 0.015019224491486115 0.04786489283963871 1.6996666828909921e-06 5.769636238606591 0.19277089912952783 EEATYGVWAERDS(ph)DDERPSFGGK ddPTM_A549_MK2206_60min_R1 4 EEATYGVWAERDSDDERPSFGGK 23 2 Q9UBB9;F6XM96;F6UKU9;F6SQZ1 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK 217.84 1.7103999999999995e-74 377445000.0 17291.199999999997 17187.4 12332.400000000001 13133.4 25253.699999999997 19100.3 17308.0 18931.5 26259.6 25928.9 26037.2 True False 20209.531830747896 18062.16524667903 14081.319760909011 16351.08358958072 21538.914183374105 21121.481068246994 20452.63956161916 21615.098100287192 20311.842527964363 20071.543481596873 19571.44464983717 1.0326029678609359 0.9228835974982206 0.7194829003604578 0.8354561393972906 1.1005275578138431 1.0791988760228142 1.0450245205475581 1.1044201635093414 1.0378305174387499 1.0255524740614315 1.0 14.256462630773884 -6.755136742547164 24.99974310435801 1.0364828134305877 0.8695459294910471 0.5451827184390234 0.07697737856224866 98.17670991668592 389419.15429118 0.011442673357306421 0.02336232862195296 1.757370198884296e-07 6.755136742547164 -0.16693688393954054 EEATYGVWAERDS(ph)DDERPSFGGK ddPTM_A549_PD325901_60min_R1 4 EEATYGVWAERDSDDERPSFGGK 23 2 Q9UBB9;F6XM96;F6UKU9;F6SQZ1 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK 265.7 3.063999999999999e-124 607258000.0 27481.9 25529.1 24721.399999999998 24087.799999999996 24379.7 26405.4 22271.800000000003 21338.5 30717.4 29226.0 32649.0 True False 30271.842256894517 27680.52685138424 26399.142865854705 25575.648698637022 22667.353977399096 26190.363177082483 23119.36553659661 20912.886877770576 29426.454500635922 27380.665372259646 28633.379979063237 1.057222105075591 0.9667222965512375 0.9219708914964908 0.8932109557913864 0.7916408748800698 0.9146794124980323 0.8074270502993891 0.7303673856548583 1.0276975516740456 0.956249852175343 1.0 14.805410360442616 EEAVKEKSPS(ph)LGK ddPTM_A549_PD325901_60min_R1 2 EEAVKEKSPSLGK 13 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EEAVKEKS(0.437)PS(0.563)LGK;EEAVKEKS(0.439)PS(0.561)LGK 51.147 0.0055017 29574000.0 4589.7 5375.2 5720.0 5166.4 6267.8 7340.4 6005.200000000001 7300.7 6795.6 6714.9 6036.3 True False 5055.642965241442 5828.186968266043 6108.193597154245 5485.516794254283 5827.571350736147 7280.622216101864 6233.731172171529 7155.081811211643 6510.004564335572 6290.920068027997 5293.8733672583985 0.9549988476319878 1.1009305595241987 1.1538231410921655 1.0362009843645228 1.1008142708472344 1.3752920991898163 1.1775368883445478 1.3515778173812139 1.2297242704365983 1.1883397338017458 1.0 12.370107969745991 -4.291795873352211 0.9886254517074674 1.1486667369606312 2.0183563610321563e-11 0.22424821329007816 0.11212167210146379 16.565685283819207 2.945552204390461 0.020105970559235214 31.93366048601628 5.107450034115482e-05 4.291795873352211 -1.1486667369404475 EEDCHS(ph)PTSKPPKPDQPLK ddPTM_A549_PD325901_60min_R1 1 EEDCHSPTSKPPKPDQPLK 19 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 EEDCHS(0.941)PT(0.049)S(0.01)KPPKPDQPLK 51.645 0.0029276999999999997 4192400.0 1480.0 1741.5 1662.5 1584.2 1738.7 1407.7 1748.6 1826.5 1565.3 1322.9 2003.7 True False 1630.2485104815855 1888.2623167947809 1775.3272474246376 1682.0524360207567 1616.5797101893709 1396.2361579214478 1815.1439298706352 1790.0690246384681 1499.515884477378 1239.3718682324738 1757.2576025008127 0.9277231227575989 1.0745506601351622 1.0102828662673642 0.9572031064921677 0.9199446386737844 0.7945540573757751 1.0329412872008308 1.0186719477502675 0.8533272995054147 0.7052875266942547 1.0 10.779109981192768 -6.383154641568156 3.5435169474785626 0.9329437357167111 1.0112429187014456 0.12324454477420144 0.10016944311762015 0.36416145396598154 8.31493884724595 0.011455270315301035 0.028453253675869195 4.138522859748334e-07 6.383154641568156 0.07829918298473448 EEDEDDDRKS(ph)EDDKEEEER ddPTM_A549_MK2206_60min_R1 1 EEDEDDDRKSEDDKEEEER 19 3 A0A0C4DGG8;Q8IX12-2;Q8IX12;F5H1H2;F5H2E6;H0YFJ7 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 EEDEDDDRKS(1)EDDKEEEER 43.799 0.016384 2913200.0 218.2 209.53 0.0 128.49 310.75 102.99 172.76 0.0 376.97 249.08 335.18 True False 255.02682552218428 220.1941820250101 0.0 159.9700557681353 265.0390866480357 113.88833344077096 204.14825575833865 0.0 291.5868968973909 192.81265500642715 251.94555550260463 1.0122299042482923 0.8739752586059558 0.0 0.6349389869133115 1.0519696849555884 0.4520354931984247 0.8102871882422555 0.0 1.1573409037349596 0.7652949250157891 1.0 7.9769681961482455 EEDEDDDRKS(ph)EDDKEEEER ddPTM_A549_PD325901_60min_R1 1 EEDEDDDRKSEDDKEEEER 19 3 A0A0C4DGG8;Q8IX12-2;Q8IX12;F5H1H2;F5H2E6;H0YFJ7 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 EEDEDDDRKS(1)EDDKEEEER 92.336 1.225e-06 2611400.0 451.19 554.11 267.55 322.86 476.35 378.39 378.47 477.44 355.23 388.66 405.68 True False 496.9944766514773 600.8067943492143 285.7075519088491 342.8023289317394 442.89281931828765 375.3085172948048 392.87288295673085 467.9170846555659 340.3009184456008 364.1199412708696 355.7839318174023 1.39689972538318 1.6886844531741367 0.8030366926617748 0.963512677991525 1.244836485604954 1.0548776482897015 1.1042457171965923 1.3151720547506718 0.9564819768764944 1.0234299773204643 1.0 8.474857545768185 -5.7564851249044695 24.99990755013081 1.0226060630540474 1.5427921907910176 0.615388054912924 0.14827619266461192 53.7736988776799 271340.3849723503 0.020311364367757878 0.07398781082126182 1.7519224385798698e-06 5.7564851249044695 0.5201861277369701 EEDEENDNDNES(ph)DHDEADS ddPTM_A549_MK2206_60min_R1 1 EEDEENDNDNESDHDEADS 19 0 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 EEDEENDNDNES(0.984)DHDEADS(0.016) 93.765 3.4065e-06 11080000.0 0.0 0.0 214.75 187.64 0.0 0.0 0.0 0.0 373.74 176.28 0.0 True False 0.0 0.0 245.204779171549 233.6118084234796 0.0 0.0 0.0 0.0 289.08848674014087 136.45822556822293 0.0 0.0 EEDEENDNDNES(ph)DHDEADS ddPTM_A549_PD325901_60min_R1 2 EEDEENDNDNESDHDEADS 19 0 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 EEDEENDNDNES(1)DHDEADS;EEDEENDNDNES(1)DHDEADS 180.92 2.7485999999999995e-43 34097500.0 865.5 776.55 720.6500000000001 847.02 1127.28 1130.04 984.82 657.3 1163.24 1283.1599999999999 840.03 True False 953.3649228525752 841.992593802462 769.5576426204904 899.3385016780084 1048.10374170488 1120.8373289035676 1022.2978640141822 644.1896358581253 1114.353068076065 1202.1410586145444 736.711635388909 1.2940815334744853 1.1429066046418221 1.0445846185315668 1.2207469768049053 1.422678414942622 1.5214057645660493 1.3876499500031823 0.874412191844993 1.512604137829043 1.6317660816907498 1.0 9.524956218045222 -4.876958418256128 17.314298880238216 1.2420983730513926 8.31685809646294 0.0 0.23353657438724085 7399375.066600407 488590.02264965617 0.03197283153493224 2072576160.73113 1.3275215558649861e-05 4.876958418256128 7.074759723411548 EEDEEPES(ph)PPEK ddPTM_A549_MK2206_60min_R1 2 EEDEEPESPPEK 12 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEK;EEDEEPES(1)PPEK 206.32 2.4758000000000002e-25 17608500.0 4409.2 5794.9 4668.6 4514.9 8562.4 5981.8 4975.6 6627.0 9524.6 5786.9 6019.9 True False 5153.365165409787 6089.835657980866 5330.677681212078 5621.050702681563 7302.8823025426955 6614.79010560252 5879.602114790403 7566.3975443363315 7367.29330766079 4479.635270823401 4524.992689212154 1.1388670699282475 1.345822209282103 1.1780522196026357 1.242223156753927 1.6138992489320905 1.4618344293400882 1.299361682684641 1.672134755571001 1.628133748199162 0.9899762449347403 1.0 12.14369974597486 -6.562355636202965 24.99963403640107 1.3655102068057816 1.2295257680794671 0.09933757067300797 0.22102194329103975 396.80872618677677 251286.955400574 0.03809692030377325 0.0793051620003856 2.739330063444604e-07 6.562355636202965 -0.1359844387263145 EEDEEPES(ph)PPEK ddPTM_A549_PD325901_60min_R1 2 EEDEEPESPPEK 12 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEK;EEDEEPES(1)PPEK 196.11 1.9836e-24 24465000.0 7491.400000000001 6247.9 7423.4 7719.9 7688.9 6800.6 6177.200000000001 6041.5 7268.8 8037.299999999999 7184.0 True False 8251.921413122805 6774.432460006952 7927.196564530555 8196.740689835018 7148.858189264998 6745.218168331748 6412.276726293542 5920.997543034939 6963.317613932902 7529.823506345799 6300.413543128126 1.3097428219014597 1.0752361592828839 1.258202578333412 1.3009845518434613 1.134664913712255 1.070599274501397 1.0177548953572144 0.9397791910807162 1.1052159618201263 1.1951316298211239 1.0 12.621230811217421 -7.105366724466152 2.838889051145691 1.039808935333161 1.225757332338447 0.4918513182787889 0.08462412075388358 0.14879725126965296 2.32431902920092 0.01097710813788522 0.0204133336212694 7.845728502916336e-08 7.105366724466152 0.18594839700528598 EEDEEPES(ph)PPEKK ddPTM_A549_MK2206_60min_R1 4 EEDEEPESPPEKK 13 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK 176.29 2.131e-22 750784200.0 44830.0 48826.700000000004 47690.200000000004 43374.200000000004 86651.1 56919.1 53532.61 60790.0 86955.9 59919.799999999996 60718.399999999994 True False 52396.208011730174 51311.77047430232 54453.38747216304 54000.88094714184 73904.83797601797 62942.2413821593 63258.79229967238 69407.16866156716 67260.52749003861 46383.87556389153 45640.3455374108 1.1480239116240187 1.1242634092733308 1.1930976163957459 1.1831829998499468 1.6192874332083906 1.3790921308991047 1.3860279004202536 1.52074152472564 1.4737076746035156 1.0162910691785028 1.0 15.478022093683098 -6.549929802038509 24.997677396609078 1.302416968450604 1.1580578216863402 0.1643519331136496 0.1824274350714503 440.5128380731867 407073.23263744696 0.032077823566465616 0.06677651826255344 2.818838522424542e-07 6.549929802038509 -0.14435914676426376 EEDEEPES(ph)PPEKK ddPTM_A549_PD325901_60min_R1 2 EEDEEPESPPEKK 13 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK 197.15 9.4244e-31 815690000.0 58973.0 58718.0 56780.0 55670.0 68787.0 55260.0 57391.0 54993.0 57327.0 61303.0 61651.0 True False 64959.895546371925 63666.37193083891 60633.43224587727 59108.609464256704 63955.6384222673 54809.980881394615 59575.04591056023 53896.12147382606 54917.745550012565 57432.31811796455 54068.31783788865 1.2014410313473993 1.177517157491894 1.121422575558437 1.093220795984077 1.1828671758204776 1.0137171466241963 1.1018475938012762 0.9968152076678457 1.0157102670490088 1.0622175872044342 1.0 15.722495851843462 -6.781351991160621 0.41356173770794014 0.9984285454124414 1.222471799106259 0.6530237466573009 0.04302464718489068 0.6332700594651414 0.1574301276050882 0.010327202397313374 0.058122463167728226 1.6544285228205623e-07 6.781351991160621 0.2240432536938176 EEDEHPY(ph)ELLLTAETK ddPTM_A549_MK2206_60min_R1 2 EEDEHPYELLLTAETK 16 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EEDEHPY(1)ELLLTAETK;EEDEHPY(1)ELLLTAETK 124.92 1.3824e-08 29026000.0 1201.96 1396.6399999999999 1206.8999999999999 1329.8 2140.17 1859.23 1740.0300000000002 2173.09 2303.0 1797.0300000000002 1979.38 True False 1404.8214628993796 1467.7230104682385 1378.0565680192904 1655.6010596969902 1825.3538280660562 2055.9724845430105 2056.170927686862 2481.132162309014 1781.3741771352918 1391.0796749084623 1487.845317891121 0.9441985978022098 0.9864755380274315 0.9262095672502798 1.1127507945810167 1.2268438164347093 1.3818455855728038 1.3819789617655203 1.6676008805981137 1.1972845266336019 0.9349625651140839 1.0 10.539008830791344 -6.4240795083820625 3.6341738251399316 1.1911498564848437 0.9563799927609307 0.29023245572306455 0.1920841397993564 0.3268416753316057 7.920155965129672 0.03129288155535727 0.07625330862307965 3.766348403179752e-07 6.4240795083820625 -0.23476986372391306 EEDEHPY(ph)ELLLTAETK ddPTM_A549_PD325901_60min_R1 2 EEDEHPYELLLTAETK 16 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EEDEHPY(1)ELLLTAETK;EEDEHPY(1)ELLLTAETK 163.8 4.3466999999999994e-21 32994000.0 3069.0 3412.9 3500.2 2977.5 4200.1 2958.0 3324.6 3611.9 3035.0 3601.0 3808.7000000000003 True False 3380.562620721612 3700.5170605735902 3737.744620412459 3161.4134126068698 3905.0994655583913 2933.9110287217745 3451.1194722909245 3539.8578210192654 2907.449504496802 3373.6322454494934 3340.2540453385463 1.0120675178701806 1.1078549746052415 1.119000102889966 0.9464589727894334 1.1691025330867 0.8783496670907893 1.0331907170674923 1.0597570642745793 0.8704276576071392 1.0099927130265818 1.0 11.705742116706368 -7.501566721265405 0.858801581328666 0.9457530445661476 1.0717405214078475 0.10909483885348792 0.08532782246107239 0.5863598962628797 0.8644998859322472 0.01582281370122075 0.033247501671147 3.150890267362992e-08 7.501566721265405 0.12598747684169986 EEDEHPY(ph)ELLLTAETKK ddPTM_A549_MK2206_60min_R1 2 EEDEHPYELLLTAETKK 17 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EEDEHPY(1)ELLLTAETKK;EEDEHPY(1)ELLLTAETKK 107.34 1.8959e-09 4862300.0 1549.06 2031.35 1464.48 990.5 2558.8 1858.94 1606.06 1592.1599999999999 2547.4 1778.0500000000002 2291.56 True False 1810.5034571191336 2134.7370384026353 1672.165285220721 1233.1725444652343 2182.403909621865 2055.651796935496 1897.8603128226284 1817.8535557855037 1970.4179673618949 1376.3872700906438 1722.5024081614322 1.0510890716557153 1.239323108222075 0.9707767474215376 0.7159191990805402 1.2669961442616056 1.1934101149557528 1.1018041564588406 1.0553561766719661 1.143927554484573 0.7990626100545047 1.0 10.750290284567054 -5.761843144812312 24.999930329360474 1.0639494940476086 1.1452060513995543 0.035883682380992044 0.1617147349819369 27.383526591474077 1696105.956664548 0.0195028511256686 0.06670430788900984 1.730441234007379e-06 5.761843144812312 0.0812565573519457 EEDEPEERS(ph)GDET(ph)PGSEVPGDK ddPTM_A549_MK2206_60min_R1 1 EEDEPEERSGDETPGSEVPGDK 22 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 EEDEPEERS(0.999)GDET(0.867)PGS(0.133)EVPGDK 60.104 0.00081978 2954900.0 216.75 270.1 327.18 150.94 319.19 357.17 329.96 379.73 269.89 215.22 275.43 True False 253.3321009712807 283.84693630962266 373.57904376878895 187.92030677595412 272.2375738284361 394.9654923297425 389.90946092857973 433.5578903743527 208.76034592576804 166.60165252321843 207.0331295187135 1.2236307375548912 1.3710218116756334 1.8044408865249826 0.9076822980592978 1.314946909517826 1.9077405304547743 1.8833191665266125 2.0941474023130384 1.0083427053972944 0.804710110456788 1.0 7.693717836571793 -8.87808389127012 17.02842581103171 1.003683528766525 1.5569918320961413 0.4031366431477712 0.3363965364488452 0.9102541988633607 130.34980389866485 0.059686669477750615 0.06353772715228588 1.3240857411003417e-09 8.87808389127012 0.5533083033296164 EEDEPEERS(ph)GDET(ph)PGSEVPGDK ddPTM_A549_PD325901_60min_R1 2 EEDEPEERSGDETPGSEVPGDK 22 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 EEDEPEERS(0.997)GDET(0.974)PGS(0.029)EVPGDK;EEDEPEERS(0.985)GDET(0.53)PGS(0.486)EVPGDK 73.805 0.00011417 5981700.0 805.3299999999999 751.45 860.9100000000001 878.7 860.76 653.11 759.1800000000001 591.8900000000001 1132.72 900.73 792.75 True False 887.0865087473886 814.7773287140044 919.3365296723874 932.9753033275083 800.303187060794 647.7912886979303 788.071010339236 580.0842896212774 1085.1157175399062 843.8577540804563 695.2467756562946 1.275930417526931 1.1719253612429574 1.3223168547665078 1.3419340239971689 1.1511066503046044 0.9317429600251399 1.1335126431838791 0.8343573964419945 1.560763394430108 1.213752848093221 1.0 9.441381338580113 -11.34480158365037 1.988047225539073 0.9983990090882104 1.2495967462858857 0.0 0.20349000785477248 0.5585445680898717 3.9887200037332007 0.17652705568681604 0.033688810724151745 4.52062431204482e-12 11.34480158365037 0.25119773719767524 EEDEPEERS(ph)GDETPGSEVPGDK ddPTM_A549_MK2206_60min_R1 2 EEDEPEERSGDETPGSEVPGDK 22 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 EEDEPEERS(1)GDETPGSEVPGDK;EEDEPEERS(1)GDETPGSEVPGDK 343.64 1.6575999999999993e-242 884640000.0 21419.0 21006.0 19755.0 17254.5 34388.0 24505.0 22044.0 27043.0 36161.0 27630.0 27619.0 True False 25034.003555727166 22075.115676119713 22556.55605370872 21481.853274583933 29329.570753508135 27098.10283489747 26049.10945784221 30876.428065714117 27970.5912372511 21388.363810131606 20760.440054378065 1.2058512965117938 1.0633259997523223 1.0865162778161765 1.0347494185246682 1.4127624788629165 1.3052759365369466 1.2547474614994418 1.487272330684664 1.3473024253815142 1.0302461679091972 1.0 14.34154940405162 -6.682458399147001 24.999998537203982 1.2246134846212822 1.094369099525662 0.20301159479855158 0.14525725384126298 60.03615749272323 19000.0487896044 0.025279883308718457 0.05262426876187526 2.0775027189966214e-07 6.682458399147001 -0.13024438509562009 EEDEPEERS(ph)GDETPGSEVPGDK ddPTM_A549_PD325901_60min_R1 2 EEDEPEERSGDETPGSEVPGDK 22 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 EEDEPEERS(1)GDETPGSEVPGDK;EEDEPEERS(1)GDETPGSEVPGDK 349.29 8.770599999999996e-243 1000250000.0 21783.7 23830.0 21481.1 20313.8 26721.0 17467.9 20005.3 21041.0 24279.0 23880.0 25005.0 True False 23995.165187687635 25838.237731392288 22938.936622347912 21568.537290012908 24844.20914244562 17325.647213863784 20766.612638820217 20621.320748654834 23258.63806249683 22372.212724613706 21929.543519754854 1.094193555195164 1.1782387402690966 1.0460289153617706 0.9835379049538017 1.1329104557085348 0.7900596379608299 0.9469696722192584 0.9403442771199715 1.060607487864245 1.0201859744349024 1.0 14.42058816107121 -5.9298234476927565 4.991576787773699 1.00528280943649 1.1347818357475088 0.30559236970346004 0.08402296175344913 0.20251601242581693 9.504682301652696 0.011729782636789258 0.03805715037151155 1.1753752792753295e-06 5.9298234476927565 0.12949902631101873 EEDEPEERS(ph)GDETPGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_MK2206_60min_R1 3 EEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEK 35 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 EEDEPEERS(1)GDETPGSEVPGDKAAEEQGDDQDSEK;EEDEPEERS(1)GDETPGSEVPGDKAAEEQGDDQDSEK;EEDEPEERS(0.996)GDET(0.003)PGS(0.001)EVPGDKAAEEQGDDQDSEK 345.76 3.9151999999999976e-287 724379000.0 4475.05 7006.4 6586.629999999999 5579.42 10426.400000000001 7122.349999999999 6517.209999999999 5595.3 13068.5 8866.900000000001 8481.9 True False 5230.329035531858 7362.995833245977 7520.713176413035 6946.378150469684 8892.690371768567 7876.032349566703 7701.302696867345 6388.45090988759 10108.5056161062 6863.861131670505 6375.610141468888 0.8203652543796903 1.1548692077884177 1.179606815588684 1.0895236685330474 1.3947983290144783 1.2353378225463656 1.2079318725553423 1.0020140454221285 1.5854961943732155 1.076581061163995 1.0 12.63834769815523 -4.672684580888187 0.9592166922650873 1.2537519112883375 1.4195512599440168e-11 0.24417297206097655 0.17035991790499086 6.0524834277154325 1.9247662381678825 0.03287556878993696 10.332122037280467 2.1247870907190364e-05 4.672684580888187 -1.253751911274142 EEDEPEERS(ph)GDETPGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_PD325901_60min_R1 2 EEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEK 35 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 EEDEPEERS(1)GDETPGSEVPGDKAAEEQGDDQDSEK;EEDEPEERS(0.994)GDET(0.006)PGSEVPGDKAAEEQGDDQDSEK 466.52 0.0 803960000.0 10474.2 9678.8 11242.7 11358.8 13888.8 10940.1 10400.2 12410.5 11690.8 13358.3 12005.9 True False 11537.533073301498 10494.466443751548 12005.697229847203 12060.407278293502 12913.298601758866 10851.007452778593 10795.985302207811 12162.962841651091 11199.476331852124 12514.854658258253 10529.250411670662 1.0957601559663974 0.9966964440431049 1.140223354982615 1.1454193609951284 1.226421454222963 1.0305583995562775 1.0253327521056483 1.1551594240905902 1.0636537164543622 1.188579829423255 1.0 13.36211511260268 -9.732363756527077 0.5772113516235164 1.0005027163208946 1.104363739850915 0.0 0.08432459894854948 0.8150788413857206 0.5768181806576997 0.036951881307425584 0.016824494475074545 1.8519797917190632e-10 9.732363756527077 0.10386102353002036 EEDFRRPS(ph)EEDFR ddPTM_A549_MK2206_60min_R1 2 EEDFRRPSEEDFR 13 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 EEDFRRPS(1)EEDFR;EEDFRRPS(1)EEDFR 69.594 0.00066337 27236500.0 549.86 355.16 625.05 537.9 572.12 681.3399999999999 648.39 552.87 790.1800000000001 641.72 669.4100000000001 True False 642.6629252136948 373.23612698898745 713.6914888064105 669.6855241472482 487.96190588278097 753.4389465631116 766.1940701038972 631.2410155933644 611.2054916581702 496.7550063061039 503.17702222387595 1.2772103987843828 0.7417590837900492 1.4183705878542112 1.330914359299357 0.9697619015394439 1.4973635783946586 1.5227127556770634 1.2545108137161907 1.214692771456145 0.9872370644243871 1.0 8.974922232261093 -10.220159280085294 0.8977893704186668 1.0149179282582044 1.245604558376547 0.16751200311690317 0.2157020251035856 0.7913832730611827 1.2516528610617819 0.10078857584797463 0.04151749673098739 6.023386342810988e-11 10.220159280085294 0.23068663011834256 EEDFRRPS(ph)EEDFR ddPTM_A549_PD325901_60min_R1 2 EEDFRRPSEEDFR 13 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 EEDFRRPS(1)EEDFR;EEDFRRPS(1)EEDFR 103.79 2.4523000000000002e-05 25551500.0 1056.5900000000001 1006.0699999999999 792.6700000000001 790.47 1113.8000000000002 744.8399999999999 865.49 743.87 834.02 1062.75 1014.49 True False 1163.854238979552 1090.8550497029719 846.4653529119321 839.2955366123766 1035.5705304014045 738.7742699909151 898.4266955643001 729.032929295274 798.9690397826762 995.6477836299497 889.7141613819672 1.3081215175576963 1.2260736054921038 0.9513902213236013 0.9433316598093968 1.163936211595062 0.8303501304771843 1.0097925092805087 0.8194012874459459 0.8980064322474769 1.119064781528754 1.0 9.797198105413305 -5.702776793318213 3.8365719568182084 0.9508129795484973 1.2900913838772385 0.5536423640262633 0.10231239252395216 0.09367150214994487 2.717806098380089 0.011955221841171204 0.051461107612210476 1.9825456980844556e-06 5.702776793318213 0.33927840432874123 EEDGADAS(ph)EEDLTR ddPTM_A549_MK2206_60min_R1 3 EEDGADASEEDLTR 14 0 Q86X53;E5RHA3 Q86X53 ERICH1 Glutamate-rich protein 1 1 EEDGADAS(1)EEDLTR;EEDGADAS(0.986)EEDLT(0.014)R;EEDGADAS(0.898)EEDLT(0.102)R 169.04 1.7283e-22 43324730.0 602.1 998.73 811.53 597.9200000000001 1005.69 1204.56 742.9300000000001 761.76 1195.0500000000002 991.36 980.96 True False 703.7197600683189 1049.561091079264 926.6171568851555 744.4104268416486 857.7543332294871 1332.0257396777845 877.9107643583158 869.7418127921594 924.3730831027062 767.4110874705777 737.3605588813031 0.9543767314269931 1.4234028094364315 1.2566676447828804 1.0095609507118761 1.1632766668871484 1.8064781518809279 1.1906125894369106 1.1795339502721713 1.2536242574530048 1.0407541849470037 1.0 9.526226439094788 -10.527387088929887 0.7067497184797429 0.9887309484650472 1.2599164531394926 0.1430793863233616 0.21385416531718196 1.1447002687279821 0.9635577913337162 0.17650265604062373 0.04249350686911283 2.969018550384621e-11 10.527387088929887 0.27118550467444547 EEDGADAS(ph)EEDLTR ddPTM_A549_PD325901_60min_R1 4 EEDGADASEEDLTR 14 0 Q86X53;E5RHA3 Q86X53 ERICH1 Glutamate-rich protein 1 1 EEDGADAS(1)EEDLTR;EEDGADAS(1)EEDLTR;EEDGADAS(0.953)EEDLT(0.047)R;EEDGADAS(1)EEDLTR 89.959 7.0687e-05 89972540.0 1055.16 1141.37 1434.57 1057.3000000000002 1401.56 1168.93 592.45 1282.62 1285.36 1476.22 1313.23 True False 1162.279066432263 1237.557255538364 1531.9285469702036 1122.6070196974788 1303.119260719512 1159.410621637506 614.9960089510796 1257.0371379040755 1231.3407891598044 1383.011217266718 1151.7110352508557 1.0091759398477116 1.0745379853626305 1.330132733022335 0.9747297588869263 1.131463727301769 1.0066853456735119 0.5339846455644375 1.0914518481020532 1.0691403932685288 1.200831784133667 1.0 10.169563074094317 -7.296138444368872 8.496555049717967 0.9950649315450245 1.1077371333952137 0.09986457852505759 0.17796572275213066 0.6651413348171353 153.76739736043098 0.025356835158193848 0.04078710617644767 5.056634409461078e-08 7.296138444368872 0.11267220185018922 EEDRAPAEQVPRS(ph)PVIK ddPTM_A549_PD325901_60min_R1 1 EEDRAPAEQVPRSPVIK 17 2 Q6NUJ5-2;Q6NUJ5 Q6NUJ5-2 PWWP2B PWWP domain-containing protein 2B 1 EEDRAPAEQVPRS(1)PVIK 69.704 0.00029382 16339000.0 3361.1 2627.2 3117.9 3385.1 3607.4 3003.0 3576.5 3765.1 3452.9 3780.4 3895.1 True False 3702.316397688955 2848.6033641592003 3329.4994434558043 3594.189938880103 3354.028668854394 2978.544563641475 3712.6056646358948 3690.0021268361875 3307.7866207831976 3541.704898832898 3416.02739307327 1.0838075845633433 0.8338935952139482 0.97467000709862 1.0521548937716647 0.981850636108893 0.8719322830025059 1.0868196408974942 1.0802027332446045 0.968313845342823 1.0367905438974132 1.0 11.738103828617126 -7.768332785696131 24.99957671758999 1.0002481480627379 0.9653407337532794 0.0955381344605658 0.07638227768947833 441.9068557610973 1602614.476918877 0.01161184924278149 0.01622892924270426 1.7047755744642158e-08 7.768332785696131 -0.03490741430945843 EEEEEETPKESLTEAEVATEKEGEDGDQPTT(ph)PPKPLK ddPTM_A549_PD325901_60min_R1 1 EEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLK 37 3 P18858;P18858-2 P18858 LIG1 DNA ligase 1 1 EEEEEETPKESLTEAEVATEKEGEDGDQPT(0.124)T(0.876)PPKPLK 85.29700000000001 5.4799e-07 13735000.0 1818.9 1844.4 1288.7 1284.6 2269.5 1886.0 1677.8 1308.6 1986.6 1439.3 1685.9 True False 2003.5533889965918 1999.834060922364 1376.1589315826345 1363.9468244617249 2110.098149349962 1870.6410413013064 1741.649597127389 1282.4989464231596 1903.110110587592 1348.4223523675262 1478.5449878006289 1.3550844955870607 1.3525689630162456 0.9307521535950718 0.922492609772144 1.4271450424303853 1.2651904789748263 1.1779483285917018 0.867406103300859 1.2871506286856473 0.9119927790451183 1.0 10.529962425779738 -11.067177788202647 1.3410057197632115 0.9987251251360436 1.182207430633204 0.16349001298597 0.18488430154616087 0.8283096575154458 2.6270423531090312 0.13878187246116114 0.029772103281217818 8.566870693388561e-12 11.067177788202647 0.18348230549716038 EEEEGISQES(ph)SEEEQ ddPTM_A549_MK2206_60min_R1 2 EEEEGISQESSEEEQ 15 0 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EEEEGIS(0.001)QES(0.5)S(0.5)EEEQ;EEEEGISQES(0.5)S(0.5)EEEQ 98.943 1.0868e-05 6894500.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EEEEGISQES(ph)SEEEQ ddPTM_A549_PD325901_60min_R1 5 EEEEGISQESSEEEQ 15 0 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EEEEGIS(0.001)QES(0.5)S(0.5)EEEQ;EEEEGISQES(0.5)S(0.5)EEEQ;EEEEGIS(0.018)QES(0.491)S(0.491)EEEQ;EEEEGISQES(0.5)S(0.5)EEEQ;EEEEGIS(0.002)QES(0.499)S(0.499)EEEQ 111.06 3.3718000000000003e-09 22884600.0 0.0 0.0 139.36 0.0 258.69 0.0 0.0 0.0 0.0 0.0 216.98 True False 0.0 0.0 148.81780763975794 0.0 240.52050683205172 0.0 0.0 0.0 0.0 0.0 190.2928355495464 0.0 0.0 0.7820462983274553 0.0 1.2639493554103227 0.0 0.0 0.0 0.0 0.0 1.0 7.572077435507978 -10.85117018297325 1.1038915840842163 0.9989740545148479 0.22555909547558825 0.0 0.4927213889731442 0.4602716990291083 0.9978148629930413 0.2717376349225299 0.06669770264952336 1.408736661605348e-11 10.85117018297325 -0.7734149590392596 EEEEGISQESS(ph)EEEQ ddPTM_A549_PD325901_60min_R1 1 EEEEGISQESSEEEQ 15 0 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EEEEGISQES(0.022)S(0.978)EEEQ 124.51 2.3037e-07 5148700.0 0.0 0.0 0.0 128.79 247.92 0.0 0.0 0.0 218.76 0.0 0.0 True False 0.0 0.0 0.0 136.74506579668807 230.50695447756877 0.0 0.0 0.0 209.56627795839216 0.0 0.0 0.0 EEEEKES(ph)DSDSEGPIQYRDEEDEDESYQSALANK ddPTM_A549_PD325901_60min_R1 1 EEEEKESDSDSEGPIQYRDEEDEDESYQSALANK 34 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 EEEEKES(0.876)DS(0.118)DS(0.006)EGPIQYRDEEDEDESYQSALANK 200.35 4.993699999999999e-89 19342000.0 2097.4 2467.3 2711.4 2077.3 3224.0 1776.6 2232.9 2454.9 2504.6 3038.7 2858.6 True False 2310.326503975728 2675.2280299901045 2895.411908972728 2205.610103109403 2997.5573621962003 1762.1319586298528 2317.874231389763 2405.935093668205 2399.3403719811167 2846.8359634122144 2507.010322158416 0.9215464665445204 1.0670989290889161 1.1549262016918689 0.8797770330719973 1.1956701317509721 0.7028818122746067 0.924557115263165 0.959682962771693 0.9570524503925455 1.1355501563955368 1.0 11.29175222088025 -6.270059735410398 24.851917787556676 0.9642400613535518 1.0497813749647738 0.0652931096101328 0.13110531402054784 1012.7093823053959 2919575.1378890956 0.015749359245187777 0.03717634716514303 5.369579349467995e-07 6.270059735410398 0.08554131361122197 EEEEKESDS(ph)DSEGPIQYRDEEDEDESYQSALANK ddPTM_A549_MK2206_60min_R1 2 EEEEKESDSDSEGPIQYRDEEDEDESYQSALANK 34 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 EEEEKES(0.1)DS(0.9)DSEGPIQYRDEEDEDESYQSALANK;EEEEKES(0.178)DS(0.792)DS(0.007)EGPIQY(0.007)RDEEDEDES(0.008)Y(0.008)QSALANK 97.874 3.1798e-10 10848800.0 985.94 1159.17 1024.23 774.4200000000001 2112.99 1253.72 1165.65 1451.92 2468.5 2045.8000000000002 1816.3600000000001 True False 1152.3425680813123 1218.1668017846182 1169.481215231086 964.1529347650346 1802.1719700609278 1386.3878182480182 1377.4335165820073 1657.7341063185154 1909.388691384485 1583.6523591301927 1365.3076830142352 0.8440167607767703 0.8922287751982988 0.8565697166877311 0.706179967167871 1.31997497156261 1.0154398422392554 1.0088813926110791 1.2141835330910031 1.3985043189452095 1.159923421535218 1.0 10.415010395321978 -6.759455120384132 24.99998125789368 1.1747504202524055 0.8318417108044829 0.6162443203901729 0.12669156199719983 34.77438738001426 438116.29610059893 0.024029604743798793 0.048121883343770724 1.73998249703324e-07 6.759455120384132 -0.3429087094479226 EEEELNLPIS(ph)PEEER ddPTM_A549_PD325901_60min_R1 2 EEEELNLPISPEEER 15 0 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 EEEELNLPIS(1)PEEER;EEEELNLPIS(1)PEEER 83.729 0.00021117 1384400.0 965.01 834.07 821.02 751.0699999999999 670.9000000000001 668.31 752.26 825.87 495.76 601.97 800.88 True False 1062.9771047971847 904.3600060689197 876.7393543943317 797.461888096269 623.7782984793516 662.8675049374741 780.887665952467 809.3973749675185 474.92493125184006 563.9615114671568 702.3768371966116 1.5133999991227396 1.2875709422287915 1.248246394191544 1.1353761198606283 0.8880963400914964 0.9437490956893871 1.1117787839775792 1.1523691159834608 0.6761682705076129 0.8029329579233987 1.0 9.456101458605026 -5.151763580934015 0.4461139583159489 0.8711134868799035 2.018769246219712 0.6732014856930482 0.13000130172656513 2.5640853368149994 0.3141358529039373 0.035138281230980666 1.5835476654396057 7.05076790703358e-06 5.151763580934015 1.1476557593398085 EEEEQQEGGFAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EEEEQQEGGFASPR 14 0 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 EEEEQQEGGFAS(1)PR;EEEEQQEGGFAS(1)PR 130.72 9.426e-09 10309800.0 878.05 1485.01 890.3399999999999 910.8 1883.12 1255.9 913.29 1143.91 1851.93 1191.25 1555.0700000000002 True False 1026.243373738561 1560.5906660094508 1016.6035999422436 1133.9460408873663 1606.11554255398 1388.7985044010502 1079.2229711827572 1306.062745577451 1432.4708119245167 922.145797640944 1168.9032012513742 0.87795411342865 1.3350897356930447 0.8697072596378506 0.9700940502801392 1.3740363965421143 1.1881210547753365 0.9232783091255038 1.1173403787236105 1.2254828375788338 0.7888983421841407 1.0 10.190939747588276 -4.970220823338594 10.662525934801407 1.1067941912409744 0.4026155868572747 0.07401938966944355 0.18225554741528058 17298.045429628284 220723.96503711332 0.02114152313632356 194685.12136901214 1.0709746141699989e-05 4.970220823338594 -0.7041786043836997 EEEEQQEGGFAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EEEEQQEGGFASPR 14 0 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 EEEEQQEGGFAS(1)PR;EEEEQQEGGFAS(1)PR 67.93 0.0035204 10931700.0 631.86 654.23 454.73 692.65 640.1500000000001 689.79 676.39 748.34 664.5 726.31 346.86 True False 696.0059620492532 709.3642581203845 485.59071231362765 735.4334173777152 595.1880723976105 684.1725789391454 702.13039158481 733.4137716386268 636.5733758609963 680.4506626471604 304.19841892670127 2.2879999327575753 2.3319130343386525 1.5962959769052387 2.4176109132076817 1.9565784546073701 2.249099720350623 2.3081329418546166 2.410971675087332 2.0926255241792795 2.2368645604667647 1.0 8.248868844439583 -10.425342630057633 0.7182925464154363 0.9730502103772445 2.188548476806707 0.0 0.42434788260266176 0.24919314809949697 0.2272045414334537 0.16854122286988257 0.046350503860193557 3.7554100999060805e-11 10.425342630057633 1.2154982664294625 EEEPTGWEEPS(ph)PESIRR ddPTM_A549_PD325901_60min_R1 2 EEEPTGWEEPSPESIRR 17 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 EEEPT(0.001)GWEEPS(0.986)PES(0.013)IRR;EEEPT(0.002)GWEEPS(0.798)PES(0.2)IRR 56.93600000000001 0.0035983000000000005 4230500.0 854.92 891.66 705.3199999999999 910.6600000000001 850.78 639.62 697.1600000000001 578.61 1111.03 971.51 852.18 True False 941.7108490411603 966.8033174810416 753.1872566337114 966.9093999410821 791.0241478316636 634.411146785335 723.6908053005905 567.069169639236 1064.3372728109 910.1686928010662 747.3672624141044 1.2600375965081718 1.2936120781610463 1.007787328281958 1.2937540197008695 1.0584142330191735 0.8488613011173317 0.9683201843267317 0.7587556990488458 1.4241154601459751 1.2178332375184453 1.0 9.545673559236969 -5.734910838842431 24.715849893869528 1.1228310244592634 1.2768250609791152 0.09859067289860868 0.18914447382402944 457.41908124552026 426155.6797153597 0.030951868423928053 0.11979918270836912 1.8411499528775663e-06 5.734910838842431 0.15399403651985177 EEEQEDLTKDMDEPS(ph)PVPNVEEVTLPK ddPTM_A549_MK2206_60min_R1 2 EEEQEDLTKDMDEPSPVPNVEEVTLPK 27 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 EEEQEDLT(0.006)KDMDEPS(0.991)PVPNVEEVT(0.003)LPK;EEEQEDLT(0.001)KDMDEPS(0.999)PVPNVEEVTLPK 69.094 5.4236999999999996e-05 5254400.0 1625.4 2169.82 1792.84 1397.5 2662.02 1367.06 1987.5 2022.98 2994.7 2108.96 2864.38 True False 1899.7277827853268 2280.254569949447 2047.091670733039 1739.8875627361588 2270.440384356571 1511.721381819015 2348.6030233832957 2309.743610116419 2316.4052315532185 1632.5444712636677 2153.0753931336926 0.8823322159752004 1.0590686128415836 0.9507756566543638 0.808094118898382 1.054510395500856 0.7021218981183844 1.0908131832601655 1.0727648541627257 1.0758588570286003 0.7582384139774974 1.0 11.072183123161992 EEEQEDLTKDMDEPS(ph)PVPNVEEVTLPK ddPTM_A549_PD325901_60min_R1 1 EEEQEDLTKDMDEPSPVPNVEEVTLPK 27 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 EEEQEDLTKDMDEPS(1)PVPNVEEVTLPK 84.06700000000001 3.9104999999999994e-07 7442800.0 1107.7 1239.5 1080.7 1007.0 1054.6 865.67 1062.2 1109.3 1034.6 904.69 1062.9 True False 1220.1528885543598 1343.957015025629 1154.042800777027 1069.2001029370665 980.5285341724918 858.6202705319741 1102.6226022581423 1087.1741412709846 991.1193599184154 847.5677190046387 932.1700382782417 1.308938110484687 1.44175092508656 1.2380174789876253 1.1470011468207295 1.0518773334354004 0.9210983353615214 1.182855656136228 1.1662830777945214 1.0632388075345736 0.9092415377028561 1.0 9.864449332428382 -6.218921617748371 1.8038083499007878 1.0462323107170157 1.3758597067703633 0.6828946692368154 0.08742136274895239 0.14185718934400748 0.8718311189123183 0.011608266580078753 0.04189665379781825 6.040576409516349e-07 6.218921617748371 0.32962739605334757 EEET(ph)GTEEYMKMDLGPGR ddPTM_A549_MK2206_60min_R1 1 EEETGTEEYMKMDLGPGR 18 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 EEET(0.92)GT(0.067)EEY(0.013)MKMDLGPGR 41.615 0.040529 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EEETS(ph)IDVAGKPNEVTK ddPTM_A549_MK2206_60min_R1 2 EEETSIDVAGKPNEVTK 17 1 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 EEET(0.015)S(0.985)IDVAGKPNEVTK;EEET(0.087)S(0.913)IDVAGKPNEVTK 172.0 1.9686e-30 19555800.0 8087.9 9102.400000000001 7625.1 7354.9 11662.2 9175.1 9122.5 9060.0 13528.0 10512.5 11994.2 True False 9452.939789829854 9565.673280506142 8706.453837769399 9156.850830174011 9946.70582882293 10146.00299206153 10779.940166447355 10344.28274508634 10463.929599776919 8137.718948751665 9015.709116920283 1.04849653723732 1.0610006552400533 0.9656981746926054 1.0156550872952232 1.1032638364691019 1.1253693814300156 1.19568411387808 1.1473620777840592 1.160633008904278 0.902615517339524 1.0 13.138225253771777 -6.761461849099009 24.99997465066841 1.0975932326212101 1.0213750042817225 0.14059214093527694 0.07969007550989515 0.8018384294517727 891933.5360185951 0.01079856247421223 0.021388262141787913 1.7319611694018638e-07 6.761461849099009 -0.07621822833948766 EEETS(ph)IDVAGKPNEVTK ddPTM_A549_PD325901_60min_R1 1 EEETSIDVAGKPNEVTK 17 1 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 EEET(0.008)S(0.992)IDVAGKPNEVTK 201.38 7.3921e-49 14066000.0 5233.9 5354.3 5213.4 4963.6 6311.7 4566.7 5312.0 5408.7 5652.0 5884.7 5824.0 True False 5765.241675006464 5805.525651917482 5567.212674720968 5270.1902988465035 5868.387966182929 4529.510309284561 5514.151066837937 5300.819235456931 5414.466095359449 5513.139037710814 5107.684921377815 1.1287387072128308 1.1366256418086615 1.0899679131380706 1.031815857863224 1.148933040411567 0.8868029995990259 1.0795793303065524 1.0378124956907124 1.060062666100962 1.079381191787301 1.0 12.318453816674971 -6.155417194262942 0.9439965752228217 1.0278496545342288 1.145363988005486 0.2558689498686566 0.06100334292429146 0.699095182262726 0.952071303045491 0.008777845321113666 0.06075750992052374 6.991700328854536e-07 6.155417194262942 0.11751433347125717 EEEVERPVS(ph)SPGDPEQK ddPTM_A549_MK2206_60min_R1 1 EEEVERPVSSPGDPEQK 17 1 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 EEEVERPVS(0.5)S(0.5)PGDPEQK 69.763 0.00039489 1924400.0 623.35 918.74 548.7 687.93 1169.1 801.77 473.3 881.94 1045.2 941.33 1142.7 True False 728.556240555699 965.4999417441792 626.5139107400647 856.4728808823514 997.1269386974052 886.6127692281478 559.2924835055668 1006.9576958279738 808.4638688414278 728.6828992179221 858.9360530843916 0.8482077774468706 1.1240649851372784 0.729406931389465 0.9971322985067456 1.1608861161628714 1.0322220915566074 0.6511456603750403 1.1723313885964441 0.9412387172924912 0.8483552373907957 1.0 9.746406917957879 -6.499320134774503 0.004907842909394633 1.9144814285694385 3.832151039741402e-05 0.0 0.1645760668831026 96949.55101557066 108.09236047426313 20581.4820666286 21588.798049651625 3.167231916734262e-07 6.499320134774503 -1.914443107059041 EEEVERPVS(ph)SPGDPEQK ddPTM_A549_PD325901_60min_R1 1 EEEVERPVSSPGDPEQK 17 1 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 EEEVERPVS(0.5)S(0.5)PGDPEQK 61.766999999999996 0.00092523 3489600.0 713.95 624.1 694.52 606.86 794.39 599.18 714.47 726.41 848.11 709.05 892.93 True False 786.4296784177884 676.6950972791401 741.654303688036 644.3443639209415 738.5947868967246 594.300476737496 741.6595468229852 711.9211826923789 812.4668860819709 664.2804619927704 783.1052707496382 1.0042451606346205 0.86411766406752 0.947068461150922 0.8228068281345292 0.9431615575638952 0.7589024093383943 0.9470751564639854 0.9091002311999288 1.0374938292832916 0.8482645779626523 1.0 9.613062447967945 -8.707169001770014 5.712729491816059 1.0177055263075108 0.8949778830021703 0.0 0.08196723469275362 0.12565902126721865 8.675384601176193 0.010080528077415723 0.011354253514321044 1.962596401577525e-09 8.707169001770014 -0.12272764330534047 EEEVERPVSS(ph)PGDPEQK ddPTM_A549_MK2206_60min_R1 1 EEEVERPVSSPGDPEQK 17 1 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 EEEVERPVS(0.122)S(0.878)PGDPEQK 85.97399999999999 1.1670999999999999e-05 1890700.0 433.86 703.29 541.92 573.54 607.12 574.19 784.05 792.5 906.68 878.47 911.59 True False 507.08496114140615 739.084457005533 618.7724047899687 714.0573257471892 517.813452247001 634.950404683525 926.5017360924138 904.8393019294613 701.3184276704418 680.0230168760877 685.2170443959053 0.740035533687662 1.07861364957306 0.9030312509746239 1.0420892643975455 0.7556926035071281 0.9266412881531634 1.3521288527042226 1.3205148782123148 1.023498223528184 0.9924198798580722 1.0 9.420417227886093 -7.56353153677161 24.99997858623066 1.0660909613331522 0.9132218905469917 0.315836438981306 0.15286145338065213 204.10786728534654 125518.14935044412 0.02478523849870588 0.03676247191213295 2.7319230550771857e-08 7.56353153677161 -0.15286907078616052 EEEVERPVSS(ph)PGDPEQK ddPTM_A549_PD325901_60min_R1 1 EEEVERPVSSPGDPEQK 17 1 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 EEEVERPVS(0.302)S(0.698)PGDPEQK 87.49 2.1725999999999997e-06 1936000.0 664.96 822.55 945.78 851.77 1068.0 588.82 894.09 783.05 937.31 949.05 915.78 True False 732.4662496823205 891.8691752394758 1009.9663182371567 904.3818983899757 992.9873643999823 584.0248451426489 928.1150842148209 767.4314534591582 897.9181202833269 889.1268210341134 803.1448656077224 0.911997674452017 1.1104711160229077 1.2575145051483794 1.1260507750437394 1.2363739182328086 0.727172481767321 1.1556010926030589 0.9555330380882898 1.1180026900923927 1.1070565960243428 1.0 9.649516424147489 EEEWDPEYT(ph)PK ddPTM_A549_PD325901_60min_R1 1 EEEWDPEYTPK 11 0 Q9NYF8-2;Q9NYF8;H0YF14;Q9NYF8-4;Q9Y2W1;A0A3B3ITZ9 Q9NYF8-2;Q9NYF8-4;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 EEEWDPEYT(1)PK 158.58 2.9437e-13 21098000.0 14891.0 13089.0 13336.0 13642.0 12780.0 12606.0 12053.0 12618.0 17241.0 15638.0 16818.0 True False 16402.72335782519 14192.055965849486 14241.061155882695 14484.635356770073 11882.376888606526 12503.340915505978 12511.683510654673 12366.324091370492 16516.420727192537 14650.614011202217 14749.492618085873 1.1120872956478598 0.9622063845401125 0.9655288845950037 0.9820429578037803 0.8056125858889762 0.8477132901625608 0.8482789092902632 0.8384236943992818 1.1197958570412145 0.9932961350302714 1.0 13.848377706229925 -8.765156003884247 24.999770945769466 1.056570266002332 0.9165688336949425 0.25165464723963504 0.08842977847030016 84.6386632141332 569318.6710020362 0.01641935951756678 0.017810339609030595 1.717291404295499e-09 8.765156003884247 -0.14000143230738948 EEFFS(ph)PDSLK ddPTM_A549_MK2206_60min_R1 1 EEFFSPDSLK 10 0 O15062 O15062 ZBTB5 Zinc finger and BTB domain-containing protein 5 1 EEFFS(0.999)PDS(0.001)LK 79.65899999999999 0.0012444 688140.0 916.71 1013.6 987.45 798.01 1405.0 1083.0 1103.9 943.33 1588.1 1586.3 1649.5 True False 1071.4282365923084 1065.1879105643598 1127.4852581743708 993.5224858240302 1198.3263611922455 1197.6023411627816 1304.464340886954 1077.0499163269644 1228.3978856745805 1227.9537282668032 1239.8836261159574 0.8641361286047868 0.8591031352685516 0.9093476471709815 0.8013030133612823 0.966482931100644 0.9658989891772136 1.0520861098660534 0.8686701668130874 0.9907364367111153 0.9903782116338404 1.0 10.275989002125677 -6.88591569755536 6.394432846827451 0.9869310406515657 0.862587244233029 0.5832048977977484 0.047577908462966646 0.10483108302094471 5.519331071891754 0.006508913628382535 0.012399923561123667 1.3004219830655414e-07 6.88591569755536 -0.12434379641853666 EEFFS(ph)PDSLK ddPTM_A549_PD325901_60min_R1 1 EEFFSPDSLK 10 0 O15062 O15062 ZBTB5 Zinc finger and BTB domain-containing protein 5 1 EEFFS(0.972)PDS(0.028)LK 73.781 0.0016617000000000001 1347400.0 1732.4 1674.6 2066.2 1686.8 1972.7 2030.5 2445.4 2107.6 2128.4 2720.0 2040.4 True False 1908.2719726745258 1815.7244190092115 2206.424757069947 1790.9898049992494 1834.1443574455461 2013.9642812101288 2538.461035174227 2065.5622646197844 2038.9507497103762 2548.2587358018973 1789.44373516128 1.0664051264526269 1.0146865103001201 1.233022706283126 1.0008639946635873 1.0249801775858782 1.1254694638547063 1.4185754965609128 1.1543041136376484 1.1394327240619322 1.4240507738413057 1.0 10.805295466985855 -10.556901577668878 0.9992812969468865 1.0047542577014816 1.1313000821097603 0.0 0.16845730114079938 0.791015326254172 1.481939443600811 0.0649189518764924 0.020956875397862916 2.7739486817415012e-11 10.556901577668878 0.12654582440827866 EEGAAPS(ph)PTHVAELATMEVESAR ddPTM_A549_MK2206_60min_R1 1 EEGAAPSPTHVAELATMEVESAR 23 0 Q9NRS6 Q9NRS6 SNX15 Sorting nexin-15 1 EEGAAPS(0.5)PT(0.5)HVAELATMEVESAR 58.26 0.00076847 941870.0 376.57 466.58 737.67 354.71 766.44 486.7 609.86 729.08 874.27 333.74 519.22 True False 440.1258097474288 490.3269290756892 842.2826982606588 441.6139659235369 653.6976912969286 538.2022709546868 720.6636678442949 832.4293227138575 676.2492409223062 258.3479022075035 390.2833442570037 1.127708410373781 1.256335778328286 2.1581312927000313 1.131521425194952 1.6749310492391014 1.3790039438636092 1.8465140223092225 2.132884569539043 1.732713555095993 0.6619495963870291 1.0 8.608378085371086 -10.731816963878 1.0666427902759386 1.0115386684734133 1.6164244136290797 0.3817444597037678 0.36147712786342434 0.49071032193126723 1.020332927085972 0.2119657585757208 0.05905068300271441 1.8543129705348988e-11 10.731816963878 0.6048857451556664 EEGAGGAAT(ph)PEDGAGGR ddPTM_A549_MK2206_60min_R1 1 EEGAGGAATPEDGAGGR 17 0 Q8IX07 Q8IX07 ZFPM1 Zinc finger protein ZFPM1 1 EEGAGGAAT(1)PEDGAGGR 54.233999999999995 0.013791999999999999 1041000.0 0.0 0.0 127.32 0.0 189.92 0.0 117.81 177.0 156.18 206.52 191.09 True False 0.0 0.0 145.37589049649182 0.0 161.98301958550266 0.0 139.21455204265968 202.09029203976618 120.80547936821105 159.86698856563083 143.63707918429716 0.0 0.0 1.0121055880700807 0.0 1.1277242652481556 0.0 0.969210407460576 1.4069507204366718 0.8410466159173882 1.1129924771062036 1.0 7.166284411429524 -6.474457761628041 0.4955909381934441 0.967710734631987 2.6762991141351882e-19 0.38788863422563424 0.41454897946166186 1.4226679535374955 0.46156060739051624 0.08565760991145652 0.6501687810797725 3.35383921447916e-07 6.474457761628041 -0.967710734631987 EEGAGGAAT(ph)PEDGAGGR ddPTM_A549_PD325901_60min_R1 2 EEGAGGAATPEDGAGGR 17 0 Q8IX07 Q8IX07 ZFPM1 Zinc finger protein ZFPM1 1 EEGAGGAAT(1)PEDGAGGR;EEGAGGAAT(1)PEDGAGGR 116.96 1.4300000000000002e-09 2595800.0 381.01 430.4 368.04 180.56 529.1800000000001 388.06000000000006 662.8199999999999 483.49 282.96 587.06 545.17 True False 419.68985471526236 466.6713184889313 393.01740760430874 191.7127811184874 492.01222237189387 384.89976802088313 688.0439778090208 473.84641265943236 271.06817521990587 549.9929314117134 478.1175461173668 0.87779638736002 0.9760598042858153 0.8220100073629845 0.4009741593365962 1.0290612138528716 0.8050316729568404 1.4390686629185574 0.9910667711473488 0.5669488129460216 1.1503299468468007 1.0 8.901221540936218 -3.595690890943344 17.775053091978855 0.848411257393443 0.8783846456392749 0.0 0.27222195674734945 0.0 0.0 0.035930741008054684 0.0 0.00025369336503474303 3.595690890943344 0.029973388245831845 EEGAPRQPGPS(ph)QWPPEDEK ddPTM_A549_MK2206_60min_R1 1 EEGAPRQPGPSQWPPEDEK 19 1 Q6P5Z2 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 1 EEGAPRQPGPS(1)QWPPEDEK 41.136 0.025086 9694200.0 1782.4 2181.5 2018.7 2315.1 3079.5 2227.3 1984.8 2540.2 3875.1 3203.4 4071.9 True False 2083.2255445038563 2292.5290320601307 2304.9820149644042 2882.299603928787 2626.5096293889833 2462.9914076379164 2345.412468332661 2900.281129036238 2997.3960372631213 2479.749715142078 3060.7348512770936 0.6806292102155236 0.7490126206468265 0.7530812458330551 0.9417018278228659 0.8581304023421272 0.8047059047307648 0.7662906400905769 0.9475767323739571 0.9793060107811874 0.8101811609415958 1.0 11.579662355558936 -3.011130963694614 0.15092900694810976 1.0566893498837673 1.0523947618271254e-16 0.2854485621643378 0.08673799926695351 19.11007552434188 0.2367832693256547 0.12679591680210545 4.225702897218512 0.000974695668993622 3.011130963694614 -1.0566893498837673 EEGAQT(ph)LEEDRAQTPHEDGGPQPHR ddPTM_A549_PD325901_60min_R1 1 EEGAQTLEEDRAQTPHEDGGPQPHR 25 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EEGAQT(0.798)LEEDRAQT(0.202)PHEDGGPQPHR 48.088 0.012232 4819400.0 0.0 0.0 0.0 107.82 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 114.47979652301348 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EEGAQTLEEDRAQT(ph)PHEDGGPQPHR ddPTM_A549_MK2206_60min_R1 7 EEGAQTLEEDRAQTPHEDGGPQPHR 25 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EEGAQT(0.003)LEEDRAQT(0.997)PHEDGGPQPHR;EEGAQT(0.019)LEEDRAQT(0.981)PHEDGGPQPHR;EEGAQT(0.001)LEEDRAQT(0.999)PHEDGGPQPHR;EEGAQT(0.002)LEEDRAQT(0.998)PHEDGGPQPHR;EEGAQT(0.024)LEEDRAQT(0.976)PHEDGGPQPHR;EEGAQTLEEDRAQT(1)PHEDGGPQPHR;EEGAQT(0.029)LEEDRAQT(0.971)PHEDGGPQPHR 147.54 3.8464e-32 218176600.0 2614.8399999999997 2851.57 2431.8100000000004 2557.29 3356.27 2444.44 2538.75 2601.2 3494.1499999999996 3853.4800000000005 4446.7300000000005 True False 3056.161065299856 2996.7027329597595 2776.677224852919 3183.826164801109 2862.567129023985 2703.109018312052 3000.0080128877207 2969.9280658409034 2702.7306040109784 2982.9761916419084 3342.4842174953665 0.9143382186528134 0.8965495535548968 0.8307226135337072 0.9525328939883088 0.8564190412749356 0.808712574965449 0.897538422824843 0.8885391441178946 0.8085993614761847 0.8924428651086199 1.0 11.706705032895472 -10.97324382897752 1.2303595256395268 1.0003024338988828 0.8669978373704084 0.11800821517472149 0.05252867392715219 0.28361086900036564 0.7607281172465031 0.03183130264429105 0.007274849617109029 1.0635457366773728e-11 10.97324382897752 -0.13330459652847448 EEGAQTLEEDRAQT(ph)PHEDGGPQPHR ddPTM_A549_PD325901_60min_R1 6 EEGAQTLEEDRAQTPHEDGGPQPHR 25 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EEGAQTLEEDRAQT(1)PHEDGGPQPHR;EEGAQT(0.184)LEEDRAQT(0.816)PHEDGGPQPHR;EEGAQTLEEDRAQT(1)PHEDGGPQPHR;EEGAQTLEEDRAQT(1)PHEDGGPQPHR;EEGAQTLEEDRAQT(1)PHEDGGPQPHR;EEGAQTLEEDRAQT(1)PHEDGGPQPHR 174.19 7.1336e-48 266535500.0 3829.8 4298.01 4806.9400000000005 5175.11 5737.52 5626.5 4161.846 5050.4 5210.7300000000005 4872.1 5759.3099999999995 True False 4218.598476650253 4660.218386567407 5133.167854878431 5494.764791172433 5334.53638856946 5580.6796494601285 4320.227326979515 4949.6658100378445 4991.741138901683 4564.47477452221 5050.951381274116 0.8352086880682071 0.9226417034708922 1.0162774232809137 1.087867290020591 1.056144869726267 1.1048769287603768 0.8553294222938503 0.9799472290286187 0.988277407976654 0.90368614345498 1.0 12.302339439610314 -5.49245907448292 2.8927094959621433 1.0027822274270335 0.8370020102150079 0.3367476094823113 0.06960552236813891 0.22333722713355314 3.329673963293674 0.00871837024391456 0.06622017450561891 3.2176657334844637e-06 5.49245907448292 -0.16578021721202563 EEGELEDGEIS(ph)DDDNNSQIR ddPTM_A549_MK2206_60min_R1 2 EEGELEDGEISDDDNNSQIR 20 0 O60293-2;O60293;G3V1X1;O60293-4 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 EEGELEDGEIS(0.995)DDDNNS(0.005)QIR;EEGELEDGEIS(0.996)DDDNNS(0.004)QIR 56.958999999999996 0.0061109 2884250.0 0.0 0.0 0.0 0.0 210.88 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 179.85983135104678 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EEGELEDGEIS(ph)DDDNNSQIR ddPTM_A549_PD325901_60min_R1 2 EEGELEDGEISDDDNNSQIR 20 0 O60293-2;O60293;G3V1X1;O60293-4 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 EEGELEDGEIS(0.988)DDDNNS(0.012)QIR;EEGELEDGEIS(0.996)DDDNNS(0.004)QIR 52.555 0.011454 4059300.0 0.0 297.1 195.42 206.57 204.22 386.3 0.0 0.0 443.59999999999997 244.17 0.0 True False 0.0 322.1376596725405 208.68237635592345 219.32935974549142 189.87629172075304 383.15410087735694 0.0 0.0 424.95703466055386 228.75306452968715 0.0 0.0 EEGGEGT(ph)PVKQDLSAPPGYTLTENVAR ddPTM_A549_MK2206_60min_R1 2 EEGGEGTPVKQDLSAPPGYTLTENVAR 27 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 EEGGEGT(1)PVKQDLSAPPGYTLTENVAR;EEGGEGT(1)PVKQDLSAPPGYTLTENVAR 198.74 7.564399999999998e-69 73725000.0 5025.5 5408.6 5575.9 6054.4 7675.7 5993.4 5704.3 6411.4 7969.7 7253.200000000001 9051.2 True False 5873.681538321435 5683.87463800157 6366.646464179929 7537.728271792343 6546.614697938306 6627.617609903062 6740.697472344819 7320.235584089019 6164.575674995718 5614.697082433826 6803.537239588206 0.8633276090772083 0.8354293418030287 0.9357847601882576 1.1079131349398734 0.9622369169738754 0.97414291661968 0.9907636623376239 1.07594554513412 0.906083917513596 0.8252614610181311 1.0 12.732069300317157 -5.891099839746058 4.835514336694281 0.9771743554064963 0.8509332800871955 0.3262729741439927 0.07170879131647348 0.15356331762889566 5.8336913558124435 0.008454385507693332 0.027873693300955085 1.2849912199824907e-06 5.891099839746058 -0.12624107531930084 EEGGEGT(ph)PVKQDLSAPPGYTLTENVAR ddPTM_A549_PD325901_60min_R1 2 EEGGEGTPVKQDLSAPPGYTLTENVAR 27 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 EEGGEGT(1)PVKQDLSAPPGYTLTENVAR;EEGGEGT(1)PVKQDLSAPPGYTLTENVAR 158.64 2.5495999999999995e-41 91887000.0 4866.6 4889.0 4163.5 4310.0 6594.1 5193.1 5061.0 5301.0 6099.5 5510.0 6352.299999999999 True False 5360.653649398432 5301.01318794699 4446.060147159385 4576.2189112798005 6130.95316441004 5150.809115366817 5253.599124485468 5195.267396445945 5843.1592265826175 5162.0976596575165 5571.007370547442 0.9622413493363697 0.9515358417890729 0.7980711299476323 0.8214347256966763 1.1005106898301542 0.9245740981420864 0.9430249818479806 0.9325543929293753 1.0488514622102236 0.9266004003061041 1.0 12.44372250937049 -7.775677736027123 0.6727627035581122 1.0213343881985042 0.9018528013165154 0.045694945826318945 0.0812454870931686 0.6997290150140406 0.6423454924579594 0.01729906871688717 0.03307536527940367 1.6761862122522704e-08 7.775677736027123 -0.11948158688198884 EEGKGPVAVTGAST(ph)PEGTAPPPPAAPAPPKGEK ddPTM_A549_PD325901_60min_R1 2 EEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEK 33 2 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8 M0QYR7 SMG9 Protein SMG9 1 EEGKGPVAVT(0.002)GAS(0.145)T(0.76)PEGT(0.093)APPPPAAPAPPKGEK;EEGKGPVAVT(0.004)GAS(0.203)T(0.773)PEGT(0.02)APPPPAAPAPPKGEK 103.3 1.6189e-14 9734300.0 1386.62 1858.9099999999999 2035.87 1998.56 1763.3600000000001 1826.6 2212.0 1619.38 1536.0 1663.0700000000002 1610.0300000000002 True False 1527.3886416243076 2015.5668695452132 2174.0363808808415 2122.0065121409166 1639.507676861754 1811.7247752072994 2296.178870452846 1587.0801955209658 1471.4472615838833 1558.0634763786982 1412.0065168210729 1.081715008697694 1.427448701924527 1.5396787160553393 1.502830537155243 1.161119058113745 1.2830852787323772 1.6261814964015593 1.1239892851869027 1.0420966504436768 1.1034392956531471 1.0 10.46353103174409 -8.47164419052028 7.370342616778918 1.0229321098991375 1.3767276795991124 0.4854211734862308 0.15284777851613787 0.14911900592254818 18.8108890396146 0.02436613967140383 0.029335613778655793 3.375637551744079e-09 8.47164419052028 0.35379556969997483 EEGS(ph)DIEDEDMEELLNDTR ddPTM_A549_MK2206_60min_R1 2 EEGSDIEDEDMEELLNDTR 19 0 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR 232.78 6.821799999999999e-76 29030500.0 2899.5 2613.6 1758.13 2868.2 3933.8 3356.3 2446.0 2385.89 3872.0 3356.8999999999996 3207.5 True False 3388.8647140310404 2746.62107641181 2007.4592708026792 3570.909128758391 3355.143231073349 3711.461438268372 2890.4065384631663 2724.0972139816827 2994.99818231344 2598.573958531696 2410.9892275034454 1.4055909812339458 1.139209186453275 0.8326288844025167 1.4810970899509288 1.3916044056934942 1.5393936214769206 1.1988467246102765 1.1298670201038008 1.2422279403607 1.0778040519171015 1.0 11.23540948953779 -10.46452064036442 0.5686109282758628 0.9753343310151461 1.2678539032636744 0.17723533123117952 0.1871587979747675 1.39754496324442 0.7224617940995646 0.2067731458321689 0.04440680529535854 3.4314633096933775e-11 10.46452064036442 0.2925195722485283 EEGS(ph)DIEDEDMEELLNDTR ddPTM_A549_PD325901_60min_R1 3 EEGSDIEDEDMEELLNDTR 19 0 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR 304.62 8.669699999999998e-163 62534660.0 5888.6 6740.2 5836.700000000001 6207.5 7168.7 5929.31 7712.9 6455.1 6952.1 7653.1 7223.0 True False 6486.406337041799 7308.220308733956 6232.813560928352 6590.9231767446345 6665.195242672426 5881.023665216467 8006.418630160824 6326.347966572015 6659.927413578986 7169.881959913784 6334.616790369494 1.0239619146185874 1.15369572471134 0.9839290626710184 1.0404612299144602 1.0521860221766706 0.9283945437958261 1.2639152288316742 0.9986946607709483 1.0513544282116734 1.1318572531197375 1.0 12.62904163151743 -10.331962893289576 0.7677936324781246 1.000796863081822 1.0564878884138458 0.0 0.09308330897710713 1.5794419940382074 1.7321418568342246 0.048653748037237474 0.01573483802742749 4.65625875530672e-11 10.331962893289576 0.05569102533202375 EEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_A549_MK2206_60min_R1 1 EEGSLSDTEADAVSGQLPDPTTNPSAGK 28 0 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 EEGS(0.068)LS(0.848)DT(0.084)EADAVSGQLPDPTTNPSAGK 120.26 5.0592e-21 6206900.0 1195.5 1435.3 1245.9 1113.7 1652.4 1374.6 1456.0 1639.5 1792.3 1838.6 1935.8 True False 1397.271172831216 1508.3506393380273 1422.587354457895 1386.5565499958925 1409.3341489210436 1520.059259614368 1720.5363532307313 1871.9041457581739 1386.3469117149743 1423.2589830368427 1455.0874346379323 0.9602661252991284 1.0366048138635384 0.9776645173297615 0.9529025658454041 0.9685563323359511 1.0446514920202048 1.1824281567374335 1.286454752613514 0.9527584932103667 0.9781260899905926 1.0 10.506890130392634 -5.24318034077222 21.000698858175877 1.014220287836255 0.9602656932051933 0.0 0.10282224888270387 1731.6386718831725 1991341.3954126325 0.015167468210772837 0.5128387073409153 5.712413794469148e-06 5.24318034077222 -0.05395459463106167 EEGSPLELER ddPTM_A549_MK2206_60min_R1 1 EEGSPLELER 10 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5GZI0 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 83.005 0.0027888 576140.0 224.52 211.08 252.89 215.17 262.56 218.02 275.03 270.02 370.52 347.44 385.85 False True 262.41348701301916 221.82307040442478 288.75360467843086 267.88665965934825 223.93777181112887 241.0907316900367 324.99939095401663 308.2961619015688 286.59781159885733 268.9530626924403 290.03279608174705 0.90477177256553 0.7648206458069071 0.9955894939448309 0.9236426475847345 0.7721118950562095 0.8312533442669159 1.120560830860018 1.0629700022430364 0.9881565652943554 0.9273194836098283 1.0 8.180072235081445 -7.740496281066398 24.992688464079286 1.0090995729295162 0.8651242536743973 0.5002410377409561 0.07652209079994941 159.74616628619376 190634.51710597595 0.0112060974040382 0.01661173546280482 1.8176226206241305e-08 7.740496281066398 -0.14397531925511897 EEGSPLELER ddPTM_A549_PD325901_60min_R1 2 EEGSPLELER 10 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5GZI0 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ; 92.06200000000001 0.0017393 1567720.0 620.81 800.05 720.86 728.15 851.46 655.17 734.3 538.79 678.6 835.06 692.75 False True 683.8341741838326 867.473021275719 769.7818944833227 773.1261717513657 791.6563869775362 649.8345127409215 762.2441883243782 528.0434107774221 650.0808018950671 782.334169087769 607.5461417040658 1.1255674709179975 1.4278306810452315 1.2670344549044665 1.2725390199711837 1.3030391152794942 1.0696052005502723 1.254627650480028 0.8691412462868223 1.0700105840055187 1.287695066079182 1.0 9.246850171957691 -7.628430344902356 1.1871611204236894 1.0244042071981792 1.2900014275367924 0.2898282426858303 0.13105828805463085 0.2288788492913643 0.6503418683537338 0.016330444595272588 0.02864024328037286 2.352716807825388e-08 7.628430344902356 0.2655972203386132 EEHGGLIRS(ph)PR ddPTM_A549_MK2206_60min_R1 12 EEHGGLIRSPR 11 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR 124.48 4.0082e-06 6024036800.0 24686.16 23346.1 20904.600000000002 18685.769999999997 26970.82 22099.960000000003 21064.01 23046.980000000003 29575.39 31139.719999999998 31200.749999999996 True False 28852.58028933421 24534.31677074446 23869.186620114382 23263.784488836085 23003.448106029206 24438.563098433835 24891.067960038217 26313.95999341612 22876.611387192945 24105.235624525216 23452.74267810695 1.2302433316794112 1.0461171687884143 1.0177567266960286 0.9919430238132763 0.9808425573825461 1.0420343340588112 1.0613286600067435 1.12199926271225 0.9754343746136002 1.0278216051475875 1.0 14.517469027950147 -5.205779037593397 2.273009738992966 1.006636909073942 1.3072567694705324 0.6382105708435082 0.04266818628355667 0.34725678677189475 1.8224273666243012 0.006530276985936123 0.21890100428003179 6.2261698261874715e-06 5.205779037593397 0.3006198603965904 EEHGGLIRS(ph)PR ddPTM_A549_PD325901_60min_R1 11 EEHGGLIRSPR 11 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR 115.06 6.0409e-06 7436801500.0 30178.110000000004 28252.24 27759.5 27085.87 34079.79 26640.470000000005 25518.34 27959.250000000004 28490.33 32442.909999999996 33027.11 True False 33241.76951124961 30633.155416044887 29643.426601434137 28758.902673426015 31686.143119292934 26423.518844939677 26489.454392871463 27401.5808251427 27292.980507891378 30394.45912585835 28964.984846100007 1.1476536130736297 1.0575926615811604 1.0234228244530044 0.9928851275507662 1.0939464766735176 0.9122572991263785 0.9145336872647506 0.9460243452822724 0.9422749797007487 1.0493518048551926 1.0 14.822022289770214 -4.536884771051763 0.5653758445480803 0.9658584866360913 1.458235799064289 0.5011509826945859 0.05113014954587144 3.9854436261220596 0.477880240380867 0.008402919162336521 1.552920916720863 2.904793264929079e-05 4.536884771051763 0.4923773124281976 EEHGGLIRS(ph)PRHEK ddPTM_A549_MK2206_60min_R1 2 EEHGGLIRSPRHEK 14 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 EEHGGLIRS(1)PRHEK;EEHGGLIRS(1)PRHEK 97.095 1.1204000000000001e-05 45758000.0 3645.4 4895.4 5211.5 3470.0 3762.8 2711.1000000000004 2321.1 2081.96 4346.2 6860.799999999999 7007.8 True False 4260.6543985269045 5144.554950056002 5950.569064738196 4320.150155774222 3209.29710455102 2997.986802517469 2742.8138251949526 2377.0842057350947 3361.792639455237 5310.940514967461 5267.569854559201 0.8088463022164217 0.976646744533112 1.1296611585678058 0.8201410280368725 0.6092557276242478 0.5691403978103192 0.5206981399251849 0.4512677138353798 0.6382056113685002 1.008233523542307 1.0 12.362921825770718 -6.510661160866377 22.457941183208366 0.7390609137742798 0.9726593960530954 0.28954807674715055 0.1854833169974006 201.42269955145386 370245.26448499144 0.031474750153782094 0.06974081710137157 3.0855944104413136e-07 6.510661160866377 0.23359848227881552 EEHGGLIRS(ph)PRHEK ddPTM_A549_PD325901_60min_R1 2 EEHGGLIRSPRHEK 14 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 EEHGGLIRS(1)PRHEK;EEHGGLIRS(1)PRHEK 89.344 1.8686e-05 110115000.0 4809.5 5569.6 5771.6 6527.5 5483.5 7983.799999999999 6424.0 7421.6 7247.6 6913.200000000001 6657.6 True False 5297.75689943323 6038.9697385128975 6163.295483450249 6930.688849971902 5098.357877048037 7918.782579820456 6668.468835347681 7273.570365867432 6943.008576207911 6476.699372185909 5838.757406003598 0.907343212099531 1.0342902296819927 1.055583415250812 1.1870143539181033 0.8731922774879707 1.3562444933365634 1.1421041107977783 1.2457394373653055 1.1891243450308258 1.1092598855924993 1.0 12.511445654633672 -4.8413862397361624 0.9248829746713387 1.1163698829005697 0.6170688299426119 0.23888595255318257 0.1202900760056257 5.1431639709776515 1.9508997496524965 0.019112903105287602 3.1016646580690086 1.4408333765872152e-05 4.8413862397361624 -0.4993010529579578 EEHSKT(ph)PEER ddPTM_A549_MK2206_60min_R1 4 EEHSKTPEER 10 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EEHS(0.005)KT(0.995)PEER;EEHS(0.032)KT(0.968)PEER;EEHS(0.123)KT(0.877)PEER;EEHS(0.018)KT(0.982)PEER 102.97 0.00021625 175825000.0 8941.5 9028.6 7573.099999999999 7316.400000000001 9219.199999999999 9711.9 10026.7 11183.2 8190.400000000001 12258.099999999999 12122.8 True False 10450.60660131352 9488.117175731428 8647.079455851253 9108.918328445678 7863.067892600393 10739.606811762533 11848.421602292976 12768.452847113627 6335.287477381195 9488.986696379812 9112.374187740843 1.146858808253621 1.0412343677124325 0.9489381447355877 0.9996207509454764 0.8629000226064926 1.1785739468656649 1.3002562623287597 1.4012213045741053 0.6952400490647379 1.0413297896771665 1.0 13.153611275311496 -8.784556432112186 24.998564183308844 0.8560856057507633 1.0990112831855563 0.193232022819381 0.16864044139038098 233.24793028507094 252230.95005721544 0.03270412229009554 0.034826957757971386 1.6422662501597249e-09 8.784556432112186 0.24292567743479299 EEHSKT(ph)PEER ddPTM_A549_PD325901_60min_R1 4 EEHSKTPEER 10 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EEHS(0.003)KT(0.997)PEER;EEHS(0.101)KT(0.899)PEER;EEHS(0.02)KT(0.98)PEER;EEHS(0.006)KT(0.994)PEER 130.69 6.7327e-07 237452000.0 10297.400000000001 9441.5 10473.3 10113.099999999999 11724.6 10055.2 9534.2 9549.6 11830.3 11679.900000000001 11311.300000000001 True False 11342.784467454776 10237.16833994713 11184.08111906914 10737.763218483466 10901.104543674177 9973.31378499094 9897.029198314429 9359.12573648373 11333.113631976437 10942.429120695802 9920.081808238474 1.1434164240495244 1.0319641045142713 1.1274182345735229 1.0824268817587694 1.098892605363494 1.0053660824357575 0.9976761673573196 0.9434524752317184 1.1424415494804148 1.1030583549833515 1.0 13.276136302840094 -7.216200995928326 24.45919474789091 1.0488450001672598 1.0941202393639566 0.20690509368451904 0.05820282234965625 701.2986589937287 379173.1026080182 0.010219284880846728 0.017700304206976443 6.078536152991063e-08 7.216200995928326 0.04527523919669685 EEIFGPVQQIMK ddPTM_A549_MK2206_60min_R1 2 EEIFGPVQQIMK 12 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 119.22 1.0822e-05 7258500.0 4716.1 5178.799999999999 4991.9 5299.9 6663.299999999999 5049.4 5466.9 5878.4 8240.7 6388.8 7433.1 False True 5512.062382425175 5442.378799556734 5699.826482637742 6598.3757379215485 5683.137396820133 5583.724156479546 6460.164965300196 6711.681201844977 6374.19460769379 4945.565642785696 5587.256126876337 0.9865419191918807 0.974070040100238 1.0201476991935108 1.1809689028182242 1.0171607078262583 0.9993678524276343 1.1562321144049423 1.2012481707362272 1.1408452490717311 0.8851510527674001 1.0 12.447924241432412 -7.733122748675508 24.99965462636222 1.086566028153089 1.0330508609670204 0.05279064083612839 0.09443053337123249 460.29399699539795 406374.4718056642 0.01347646674661651 0.019986583253958006 1.8487460169022324e-08 7.733122748675508 -0.053515167186068524 EEIFGPVQQIMK ddPTM_A549_PD325901_60min_R1 2 EEIFGPVQQIMK 12 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 125.75 1.9246e-06 11263000.0 8057.2 8650.9 8770.8 9327.3 11221.5 9663.0 9838.8 10405.3 10466.2 9770.5 10566.8 False True 8875.161012602854 9379.941703336195 9366.039231104965 9903.426137164754 10433.340552073407 9584.307731757435 10213.220917997936 10197.758128700061 10026.342011190909 9153.588962556041 9267.150588464134 0.9577011755534399 1.012171067448981 1.0106708790039443 1.0686592434887876 1.125841266145061 1.0342238037750355 1.1020885892057783 1.1004200300137952 1.0819228537919547 0.9877457882200107 1.0 13.177910099908226 -5.632367923466225 1.5476409546105652 1.0553094651445925 0.9576501339985416 0.35947920621537965 0.041843414475992956 0.5773780669337002 2.044564347857015 0.006606081267360483 0.06903431439488286 2.331482051871711e-06 5.632367923466225 -0.09765933114605085 EEIPVQEKT(ph)PK ddPTM_A549_MK2206_60min_R1 2 EEIPVQEKTPK 11 1 Q96B01-2;Q96B01;H0YGT5;Q96B01-3;F5H1Y0;H0YFK6;F5H4V6;F5H031;F5H710 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 EEIPVQEKT(1)PK;EEIPVQEKT(1)PK 86.214 0.00014271 63271000.0 9278.2 11368.2 10621.7 8660.7 13193.7 10018.0 10083.7 10326.2 14242.9 13726.1 16191.8 True False 10844.13332978887 11946.79282249186 12128.016777305893 10782.571888793604 11252.924207588703 11078.098110589792 11915.77776447303 11789.970472661207 11016.905891237622 10625.364476809538 12170.92918905386 0.8909864778066191 0.9815842847262983 0.9964741877073312 0.8859284054081178 0.9245739608533109 0.910209725035051 0.9790359946543519 0.9686992907053247 0.9051819889927443 0.8730117735271722 1.0 13.571151694295187 -11.014096148802443 1.2770696505915773 1.0002583127481495 0.9366086412143928 0.0 0.0524749412837381 0.4911377605730878 1.4167858956296724 0.02724852694529996 0.0060652837913943575 9.680635121805697e-12 11.014096148802443 -0.06364967153375667 EEIPVQEKT(ph)PK ddPTM_A549_PD325901_60min_R1 2 EEIPVQEKTPK 11 1 Q96B01-2;Q96B01;H0YGT5;Q96B01-3;F5H1Y0;H0YFK6;F5H4V6;F5H031;F5H710 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 EEIPVQEKT(1)PK;EEIPVQEKT(1)PK 116.96 7.2365e-06 102452000.0 14807.3 15329.5 15792.7 16740.0 18180.6 16868.1 17065.6 17705.6 18027.9 16349.400000000001 18304.1 True False 16310.526195441871 16621.370763884937 16864.48759121989 17773.991780701595 16903.657375665094 16730.731786200722 17715.04074665464 17352.447918225495 17270.250056711007 15317.096093793947 16052.811739249948 1.0160541629951219 1.0354180335426741 1.050562846257354 1.1072198484233933 1.0530029038049942 1.0422306109336115 1.1035475301401845 1.0809600336742173 1.0758395686211382 0.954169047927153 1.0 13.970538395089783 -10.74589782938359 1.0025412137030112 1.0000783650623222 1.0640928615976668 0.5076876866490807 0.030509875759323825 0.4171376427639586 0.7461800955646275 0.01880446164433273 0.004843528476306421 1.795155899321956e-11 10.74589782938359 0.06401449653534463 EEIQETQT(ph)PTHSR ddPTM_A549_MK2206_60min_R1 4 EEIQETQTPTHSR 13 0 H7BZL0;Q9BYG3 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 EEIQET(0.002)QT(0.982)PT(0.015)HS(0.001)R;EEIQET(0.049)QT(0.947)PT(0.004)HS(0.001)R;EEIQETQT(1)PTHSR;EEIQET(0.019)QT(0.897)PT(0.081)HS(0.004)R 164.53 5.3141e-19 116106300.0 5524.74 5723.4400000000005 5320.0599999999995 5063.99 8036.39 6208.25 6027.5599999999995 6781.55 9061.310000000001 12221.74 12515.5 True False 6457.181045075309 6014.738649211203 6074.524505142684 6304.667777331149 6854.247676741456 6865.202894297173 7122.689629999605 7742.8554801258515 7008.93775293869 9460.840445632928 9407.555939772205 0.6863824234917771 0.6393518877504378 0.6457069768207802 0.6701706391855706 0.7285896273827978 0.7297541399964727 0.7571243451114759 0.8230464458246248 0.7450328010601662 1.005664011588329 1.0 13.199604247620352 -14.999999999998769 0.1395617672891884 2.04313359991593 0.5990901255069423 0.941755162661391 0.02953206445927923 11.812710489344546 0.11080672524556723 3.396627133455605 0.07815860056247576 1.0000000000028345e-15 14.999999999998769 -1.4440434744089876 EEIQETQT(ph)PTHSR ddPTM_A549_PD325901_60min_R1 2 EEIQETQTPTHSR 13 0 H7BZL0;Q9BYG3 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 EEIQET(0.028)QT(0.905)PT(0.026)HS(0.042)R;EEIQET(0.001)QT(0.891)PT(0.037)HS(0.071)R 66.02199999999999 0.0045701 131595000.0 1024.4099999999999 853.06 736.0799999999999 1090.9499999999998 1368.0 1112.15 1131.9499999999998 859.24 1130.1 867.47 1341.78 True False 1128.4073490692165 924.9503600143308 786.0348152086175 1158.3355037727838 1271.9163993437965 1103.0930191321568 1175.0269766768065 842.1017841392601 1082.605827028611 812.6977961566438 1176.7495662442175 0.9589188570263996 0.7860214157260804 0.6679711960441779 0.9843517575874661 1.080872630701976 0.9374067777673823 0.9985361459933154 0.7156168213657909 0.9199967929318376 0.6906293568906913 1.0 10.200591605904735 -14.161835473448104 0.016267261521370584 2.0607091160442117 1.0513847472941771e-06 0.0 0.1492971278306634 5176.69732492005 7.535596419742968 586.3832909362554 387.24735765274187 6.889132323141938e-15 14.161835473448104 -2.0607080646594644 EEKDKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_A549_MK2206_60min_R1 3 EEKDKDDQEWESPSPPKPTVFISGVIAR 28 3 P51397 P51397 DAP Death-associated protein 1 1 EEKDKDDQEWES(0.116)PS(0.862)PPKPT(0.021)VFIS(0.001)GVIAR;EEKDKDDQEWES(0.035)PS(0.965)PPKPTVFISGVIAR;EEKDKDDQEWES(0.465)PS(0.53)PPKPT(0.004)VFIS(0.001)GVIAR 89.266 3.5891e-10 42289200.0 2361.5699999999997 2964.41 2603.58 2437.05 4081.0 3341.5699999999997 3048.23 2970.43 4471.0 4390.0 3999.5 True False 2760.14528115685 3115.2858069811496 2972.806793739051 3034.1273594033314 3480.6903060680106 3695.172719445351 3602.05393407178 3391.4975490603547 3458.325638719882 3398.2959510125843 3006.3137694154425 0.9181161691228065 1.0362477259274556 0.9888544648874403 1.0092517255753037 1.1577934217907027 1.2291374097534244 1.1981630030494705 1.1281249427666389 1.150354189207712 1.1303863174845385 1.0 11.553779876070728 -6.634401319860661 6.2925606719665295 1.103748487714258 0.988720552065228 0.506445511220959 0.06681402551454797 0.22174798646694677 11.483816451446327 0.012535610923202987 0.026275867597183596 2.3205914090986178e-07 6.634401319860661 -0.11502793564903002 EEKDKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_A549_PD325901_60min_R1 1 EEKDKDDQEWESPSPPKPTVFISGVIAR 28 3 P51397 P51397 DAP Death-associated protein 1 1 EEKDKDDQEWES(0.015)PS(0.983)PPKPT(0.002)VFISGVIAR 88.744 3.7601000000000003e-10 19398000.0 1525.8 1760.2 1590.5 1700.1 1745.7 1942.3 1339.9 1767.6 2221.3 2242.5 1429.3 True False 1680.6980927654063 1908.5382314224385 1698.4408944534657 1805.111315792758 1623.0880543380601 1926.4825527675127 1390.890627721414 1732.343831344625 2127.9464857788275 2100.9081672925568 1253.505161079208 1.3407987018724403 1.522561127533993 1.3549532520402146 1.4400509641608843 1.2948395465246103 1.5368764426218264 1.1096010378799905 1.3819997596604707 1.6975969081346003 1.676026738879779 1.0 10.29175222088025 -11.067214425910887 1.3925849885974697 1.0009025108386775 1.4385282609014123 0.0 0.2451599473069204 0.2842834811877253 0.9871990068637317 0.11503678155484172 0.025675768648587532 8.566148010317148e-12 11.067214425910887 0.43762575006273474 EEKESEDKPEIEDVGS(ph)DEEEEK ddPTM_A549_MK2206_60min_R1 3 EEKESEDKPEIEDVGSDEEEEK 22 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK 254.55 1.1435999999999997e-110 123876300.0 11685.5 11393.7 9347.7 9912.6 21158.600000000002 16586.9 12558.9 17727.0 21873.6 13521.3 13781.8 True False 13657.72671695455 11973.590663572551 10673.344420311478 12341.187444993517 18046.19796862794 18342.11474850689 14840.68956496527 20239.856536660653 16919.264524961578 10466.828939049317 10359.398701670134 1.3183899095178817 1.1558190787311022 1.0303053997323928 1.1913034530666224 1.7420121078763526 1.7705771615441144 1.432582140368115 1.9537675032622888 1.6332284346034358 1.01037031592981 1.0 13.338652645576397 -6.556910756465039 24.938165929339025 1.4293550725345205 1.1575805619027508 0.2044060026016028 0.29119281578410994 297.3742800843864 217910.72127268944 0.04965995157125898 0.10337586566915723 2.7738900550687925e-07 6.556910756465039 -0.2717745106317697 EEKESEDKPEIEDVGS(ph)DEEEEK ddPTM_A549_PD325901_60min_R1 3 EEKESEDKPEIEDVGSDEEEEK 22 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK 243.55 6.962699999999998e-99 178918100.0 13233.9 13766.5 14154.3 13844.099999999999 15685.0 12155.0 14119.7 13644.2 15063.3 15199.4 13941.4 True False 14577.395785717736 14926.651268535943 15114.895914720328 14699.218614767664 14583.339710312472 12056.01370997741 14657.032910096312 13372.055727332163 14430.241885036794 14239.707290054168 12226.696181816045 1.192259590730465 1.2208245830738285 1.2362207819639544 1.2022232658916345 1.192745733880368 0.9860401804951626 1.1987729712213464 1.0936769449804056 1.180224131723984 1.1646406419447912 1.0 13.577747000420059 -14.999999999999998 0.16391499330005516 0.35470474522418016 1.2175867013817832 0.08751808988020726 0.0787836728507367 34.939690144865125 0.3662977846905082 7.31259035720284 0.09612613767726823 1.000000000000004e-15 14.999999999999998 0.862881956157603 EEKESEDKPEIEDVGS(ph)DEEEEKK ddPTM_A549_MK2206_60min_R1 1 EEKESEDKPEIEDVGSDEEEEKK 23 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EEKESEDKPEIEDVGS(1)DEEEEKK 155.95 2.4435e-33 23904000.0 2681.4 3011.1 2482.6 2855.4 4670.6 3740.6 3193.4 3419.2 4589.6 4149.8 3906.2 True False 3133.954766064091 3164.3521285520346 2834.670010576426 3554.973128183777 3983.5609271064077 4136.427809190677 3773.5994439608658 3903.8820708608405 3550.0629280851686 3212.35729783873 2936.1827343644436 1.0673568539808393 1.0777095347360865 0.9654269733964665 1.210746554217197 1.356714240051778 1.408777376414222 1.2852059239350055 1.3295773540150122 1.2090742468225852 1.0940590516530186 1.0 11.519726042270209 -4.184384864304312 14.008170263536794 1.1544417475266489 1.1549330391236468 0.0 0.14654319388826398 0.0 0.0 0.022423517594540764 0.0 6.54056303716572e-05 4.184384864304312 0.0004912915969979004 EEKESEDKPEIEDVGS(ph)DEEEEKK ddPTM_A549_PD325901_60min_R1 1 EEKESEDKPEIEDVGSDEEEEKK 23 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EEKESEDKPEIEDVGS(1)DEEEEKK 86.785 2.4538e-07 237110000.0 7195.7 9804.9 9103.4 9668.2 10559.0 7985.9 10603.0 9742.1 10062.0 11565.0 10759.0 True False 7926.202166805632 10631.19333329954 9721.21146719124 10265.382755924677 9817.372266572484 7920.865478116705 11006.502967184228 9547.786172970393 9639.12913154755 10834.783926304752 9435.711206920312 0.8400216997943324 1.1266976171867618 1.0302574182284783 1.087928883240499 1.0404485736456468 0.8394561156457827 1.166473064490557 1.011877744410817 1.0215583033611761 1.148274220003505 1.0 13.20391554822465 EEKIHS(ph)PIIR ddPTM_A549_MK2206_60min_R1 2 EEKIHSPIIR 10 1 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 EEKIHS(1)PIIR;EEKIHS(1)PIIR 89.23100000000001 0.00028973 9133400.0 1819.84 1940.15 1746.3000000000002 1359.8200000000002 2325.0 1343.39 1166.8200000000002 902.76 2241.3 2723.3999999999996 2295.8 True False 2126.9845011837388 2038.8953479493312 1993.9515989163033 1692.975961044639 1982.9955799088764 1485.5466381298895 1378.8160904372814 1030.72899458655 1733.649128620638 2108.1820485165536 1725.689499143386 1.232541834576586 1.181496062276219 1.1554521250236962 0.9810432073006264 1.1491033473247734 0.8608423698859494 0.7989943098811872 0.5972853141299133 1.0046124343233258 1.2216462170993292 1.0 10.752957190462942 -6.3122638025298965 1.146439340341218 0.9488202873452457 1.223982092625856 0.33076175901145777 0.15635499233030814 0.5137226418222313 1.1904379237438045 0.022785496015914484 0.10640695069727645 4.872324416815693e-07 6.3122638025298965 0.2751618052806103 EEKIHS(ph)PIIR ddPTM_A549_PD325901_60min_R1 2 EEKIHSPIIR 10 1 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 EEKIHS(1)PIIR;EEKIHS(1)PIIR 106.58 0.00012188 11868300.0 2122.23 1872.6399999999999 2034.33 2280.77 2032.52 2917.8 2380.2599999999998 2714.3 2144.22 2633.7 2745.2 True False 2337.677227296848 2030.4539448306512 2172.3918672200675 2421.647982895506 1889.7628070133444 2894.038404193506 2470.8420968282508 2660.1611571728426 2054.105890125909 2467.4077325299454 2407.5578032565886 0.970974497116864 0.8433666440258061 0.9023217902729382 1.0058524782332778 0.7849293605566405 1.202063933949531 1.026285679822956 1.1049209923743344 0.8531906844967202 1.0248591868458572 1.0 11.233354720932496 -4.884419824213208 19.158075714171964 0.9516268318603599 4.140449759216688 0.0 0.11834622731561001 4581.874329729297 780273.345180633 0.015721629060816217 17544.923263798864 1.3049088476776978e-05 4.884419824213208 3.188822927356328 EEKIS(ph)PIYGK ddPTM_A549_MK2206_60min_R1 2 EEKISPIYGK 10 1 Q9BX63;Q9BX63-2;J3QQP5 Q9BX63 BRIP1 Fanconi anemia group J protein 1 EEKIS(0.998)PIY(0.002)GK;EEKIS(0.99)PIY(0.01)GK 45.257 0.013368000000000001 5259100.0 2870.0 3104.1 2942.2 2573.2 3852.3999999999996 3009.5 2793.7 3205.3999999999996 4028.5 4349.4 3954.3999999999996 True False 3354.3858352367943 3262.0854313169193 3359.4482015298336 3203.6341155153355 3285.7170632434218 3327.963292455579 3301.279127761465 3659.775266125798 3116.0511821925843 3366.867519210509 2972.413344112117 1.1285058458916235 1.0974535011352298 1.130208962419164 1.0777889023615206 1.1054038193415832 1.1196165900169135 1.110639317476077 1.231247085259941 1.0483236419204587 1.132705020948632 1.0 11.537419035813155 -8.973234137834819 16.360979534123896 1.0213144877803113 1.122603483116082 0.158912667941853 0.05031449864343887 1.9880144640397834 1215.2642763881738 0.0067629933411609425 0.007047778718449119 1.06356946962571e-09 8.973234137834819 0.10128899533577074 EEKLGDS(ph)LQDLYR ddPTM_A549_PD325901_60min_R1 2 EEKLGDSLQDLYR 13 1 A0A2R8Y700;Q8WXI2-5;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 EEKLGDS(1)LQDLYR;EEKLGDS(1)LQDLYR 116.29 4.7597e-06 8846000.0 3056.0 3308.0 3107.3 2806.5 2848.2 5026.0 3247.8 3780.7 3699.1 4228.0 4316.4 True False 3366.242870291703 3586.776769427012 3318.1800637128295 2979.8511309760456 2648.15225775658 4985.069922364987 3371.396806264354 3705.2909725982277 3543.6396909667583 3961.043358445004 3785.510163914011 0.8892441770150187 0.9475015557000857 0.8765476567316919 0.787172930978223 0.6995496361363709 1.3168819278009007 0.890605667474556 0.978808882332298 0.936106241305882 1.0463697591421868 1.0 11.886272026445448 EEKQEHLAES(ph)PVALGPER ddPTM_A549_MK2206_60min_R1 1 EEKQEHLAESPVALGPER 18 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 EEKQEHLAES(1)PVALGPER 58.015 0.0026296999999999996 6631300.0 902.1 969.64 841.33 570.33 795.43 728.47 594.93 642.41 1194.4 1134.6 1112.9 True False 1054.3524257725132 1018.990534332701 960.6432449843979 710.060875603087 678.4233006997497 805.5562118807501 703.0210801013455 733.4735847981142 923.8703070648694 878.2930719860778 836.5362155225515 1.260378697548558 1.2181068977344602 1.1483582266481094 0.8488106819852858 0.8109909506738631 0.9629663329967736 0.8403952716645934 0.8767983635232599 1.1043996540995702 1.049916376229381 1.0 9.70828418888331 -6.044371708903089 5.5482760406680205 0.9890042343821407 1.2280813867402243 0.5793705469184034 0.0977821500111052 0.1415348306886951 10.86572311462233 0.016760222268054136 0.046968247575466165 9.028763788177628e-07 6.044371708903089 0.23907715235808358 EEKREEDEENDNDNES(ph)DHDEADS ddPTM_A549_MK2206_60min_R1 3 EEKREEDEENDNDNESDHDEADS 23 2 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 EEKREEDEENDNDNES(1)DHDEADS;EEKREEDEENDNDNES(0.981)DHDEADS(0.019);EEKREEDEENDNDNES(1)DHDEADS 308.35 4.701199999999999e-176 386345000.0 6754.360000000001 7416.629999999999 6992.2 6756.9400000000005 8647.26 6777.9 6561.6 6742.63 8144.55 9787.42 10403.1 True False 7894.330839752615 7794.10478801198 7983.799100923422 8412.39060333056 7375.259508956053 7495.132879194108 7753.757785273876 7698.41845093835 6299.822429173793 7576.435024341593 7819.723159046329 1.0095409618970943 0.996723877493705 1.0209823210540747 1.0757913588793226 0.9431612039134539 0.9584908220853425 0.99156423156795 0.9844873398148826 0.8056324119205905 0.9688878839114291 1.0 12.932901817496402 -8.552461456359579 24.93261326502175 0.9075228941188119 0.9985702272785407 0.2416602074827502 0.05560748899292316 212.21074988377842 178852.3663726222 0.012640350037023709 0.014332893521747091 2.802454328485118e-09 8.552461456359579 0.0910473331597288 EEKREEDEENDNDNES(ph)DHDEADS ddPTM_A549_PD325901_60min_R1 6 EEKREEDEENDNDNESDHDEADS 23 2 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 EEKREEDEENDNDNES(1)DHDEADS;EEKREEDEENDNDNES(1)DHDEADS;EEKREEDEENDNDNES(0.999)DHDEADS(0.001);EEKREEDEENDNDNES(1)DHDEADS;EEKREEDEENDNDNES(1)DHDEADS;EEKREEDEENDNDNES(0.912)DHDEADS(0.088) 272.18 5.793399999999998e-125 773240800.0 7258.35 6688.58 7082.22 7267.639999999999 7698.029999999999 6878.669999999999 6819.35 7929.179999999999 7915.04 7826.030000000001 8319.97 True False 7995.212348685142 7252.250110173553 7562.862038048552 7716.545616792 7157.346929561786 6822.652392135768 7078.8640959415025 7771.026284578627 7582.398394093032 7331.893130201369 7296.666434635267 1.0957349387295643 0.9939127922511461 1.0364818106731215 1.0575439738020203 0.9809064171534319 0.9350369039415747 0.9701504323042757 1.0650104885830747 1.0391592464884338 1.0048277793539924 1.0 12.833021787469963 -5.252677735652745 24.15201940155699 1.0135488268181316 1.0957350074740309 0.3006650394858127 0.037566864890736934 744.9181717277216 2053342.0391069425 0.0054194647431009095 0.08547002353484416 5.588847563562478e-06 5.252677735652745 0.08218618065589922 EEKS(ph)PDDLK ddPTM_A549_MK2206_60min_R1 1 EEKSPDDLK 9 1 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 EEKS(1)PDDLK 41.401 0.060744000000000006 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EEKS(ph)PDDLK ddPTM_A549_PD325901_60min_R1 1 EEKSPDDLK 9 1 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 EEKS(1)PDDLK 53.967 0.005786100000000001 11472000.0 3418.4 3405.1 3086.9 3227.2 3337.6 3028.4 2865.5 3238.2 3667.3 3701.0 3350.9 True False 3765.433451506924 3692.0597271994893 3296.395597037662 3426.5368144970225 3103.178490094926 3003.737714462821 2974.5481705617667 3173.6115606812414 3513.176134379283 3467.318228383388 2938.760543105241 1.2812998528720476 1.2563322778582955 1.12169588120117 1.1659802710146545 1.0559480585702816 1.0221104000834724 1.0121777963640108 1.0799149893743452 1.1954618564012316 1.1798573505821084 1.0 11.520992094366283 -5.777733091714718 1.2323110907506232 1.0814835622542525 1.3099575294393986 0.5412708901140895 0.06362830624209696 0.49464009629989836 1.0821880799883574 0.011603082899397947 0.11305361341721563 1.6682721826708531e-06 5.777733091714718 0.22847396718514612 EEKS(ph)PDDLKK ddPTM_A549_MK2206_60min_R1 4 EEKSPDDLKK 10 2 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 EEKS(1)PDDLKK;EEKS(1)PDDLKK;EEKS(1)PDDLKK;EEKS(1)PDDLKK 54.343 0.006044399999999999 29654900.0 8242.9 9093.4 8358.6 7638.900000000001 11604.800000000001 10078.5 9065.8 8990.4 13259.099999999999 12724.5 11933.8 True False 9634.100000443692 9556.215218948244 9543.975167326234 9510.430842923248 9897.749292785604 11145.000180433148 10712.938510384036 10264.816731945273 10255.935020431849 9850.02661245094 8970.308103875486 1.0739987845324315 1.0653162754598837 1.06395176807839 1.0602122839921642 1.1033901152747954 1.2424322611191156 1.1942665052670456 1.144310386341191 1.1433202629908472 1.0980700437920727 1.0 13.130941823017272 -4.4622628068181776 16.398725402509037 1.092607132683508 1.0936997316368093 0.0 0.06722490065968566 0.0 0.0 0.010865723489391842 0.0 3.449349439388775e-05 4.4622628068181776 0.0010925989533012714 EEKS(ph)PDDLKK ddPTM_A549_PD325901_60min_R1 4 EEKSPDDLKK 10 2 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 EEKS(1)PDDLKK;EEKS(1)PDDLKK;EEKS(1)PDDLKK;EEKS(1)PDDLKK 75.462 0.00031683 103842000.0 27166.600000000002 25755.8 28701.7 29262.0 34233.1 30594.800000000003 31202.0 31065.8 30478.200000000004 32404.699999999997 34457.9 True False 29924.53323300611 27926.331655987968 30649.569959342996 31069.447281176224 31828.685153783717 30345.646092473624 32389.409184389544 30446.168248351358 29197.307244795513 30358.661711779292 30219.79674662511 0.9902294672563615 0.9241071966874406 1.0142215785341402 1.028115693221729 1.0532395509026145 1.004164466985125 1.0717944086770448 1.0074908346877458 0.9661649113525627 1.0045951654247869 1.0 14.883206336755629 -5.778692431163817 24.996897391496205 1.0015475508060356 0.9571683132210612 0.2380114262846883 0.032980776524653393 274.1120745974391 397145.7378927364 0.0052482568163179175 0.016371549141204096 1.6645911021360117e-06 5.778692431163817 -0.04437923758497442 EEKS(ph)PDDLKKK ddPTM_A549_PD325901_60min_R1 1 EEKSPDDLKKK 11 3 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 EEKS(1)PDDLKKK 49.12 0.0085387 4664000.0 1456.5 1683.1 1617.1 1579.4 1870.4 2002.8 1836.2 1725.3 1906.4 1592.8 1879.4 True False 1604.3628077813696 1824.9407438399644 1726.8461304122595 1676.955950922348 1739.029556529706 1986.4898608262242 1906.0775958071954 1690.8875380283325 1826.2806376845806 1492.2303361710515 1648.2457144981913 0.9733759922256604 1.1072018739606235 1.0476873170199614 1.01741866286781 1.0550790705736213 1.2052146372065717 1.156428061084024 1.0258710355835043 1.1080147951366535 0.9053445873058807 1.0 10.686715614964516 -4.142453431644547 13.061557288930352 1.0635869512143261 0.7819527513134396 0.0 0.08182859840474632 0.0 0.0 0.009298201183476372 0.0 7.203549890346483e-05 4.142453431644547 -0.28163419990088656 EEKS(ph)VEYEGDLK ddPTM_A549_MK2206_60min_R1 2 EEKSVEYEGDLK 12 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 EEKS(1)VEYEGDLK;EEKS(1)VEYEGDLK 123.97 1.9990000000000003e-06 43009000.0 8589.1 14974.0 7583.4 7352.4 12216.8 8970.6 8697.5 8637.599999999999 18726.5 10782.2 18036.4 True False 10038.73009666633 15736.112640874828 8658.840150731194 9153.738330061775 10419.724903497101 9919.86293779765 10277.723167736458 9862.00625154059 14484.977650075576 8346.493531436878 13557.46410068375 0.7404578040638177 1.1606973490035797 0.6386769742797621 0.67518071684218 0.7685600217057995 0.7316901497306828 0.7580859585103469 0.7274226343732834 1.0684134984613418 0.6156382542820773 1.0 13.726799729741472 -8.763395425088968 24.998523840589836 1.0323063866594016 0.7778401905212164 0.0 0.18065293906639918 34.30793415702362 438458.967239433 0.022210540340543605 0.024231625262933276 1.7242672318872597e-09 8.763395425088968 -0.2544661961381851 EEKS(ph)VEYEGDLK ddPTM_A549_PD325901_60min_R1 2 EEKSVEYEGDLK 12 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 EEKS(0.999)VEY(0.001)EGDLK;EEKS(0.999)VEY(0.001)EGDLK 127.32 2.6448e-08 82491000.0 19812.1 18725.8 20863.3 19853.5 22546.0 17754.3 18395.2 19657.8 22104.2 23271.0 25167.0 True False 21823.40980710284 20303.888884200813 22279.208999214694 21079.80560443006 20962.446739477517 17609.714867219394 19095.239402239673 19265.709757754223 21175.237343426103 21801.665088546284 22071.618546757458 0.9887543933794976 0.9199093777915829 1.0094053117136592 0.9550638780646604 0.9497466937039427 0.7978442917502504 0.8651490311771882 0.8728725406766578 0.9593876089588798 0.9877692042548084 1.0 14.429904808159327 -9.136608293245944 2.5076969929824955 0.9852456576468412 0.9193014074593499 0.19395683801266417 0.057032073581325976 0.3263303312472533 4.256214264194648 0.01203805432440649 0.011544751442347668 7.301157325925542e-10 9.136608293245944 -0.0659442501874914 EELEQQT(ph)DGDCEEDEEEENDGETPK ddPTM_A549_MK2206_60min_R1 2 EELEQQTDGDCEEDEEEENDGETPK 25 0 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EELEQQT(0.997)DGDCEEDEEEENDGET(0.003)PK;EELEQQT(1)DGDCEEDEEEENDGETPK 133.61 8.6683e-24 18235200.0 643.74 894.0799999999999 794.69 1025.61 1128.2 998.81 1121.2 758.33 1112.4 1635.87 1332.8899999999999 True False 752.3875740680614 939.5848530755549 907.3889916639731 1276.8844960413815 962.2432745175034 1104.503411243581 1324.9075269521259 865.825599788225 860.4431761377767 1266.3258308389434 1001.8966271074248 0.7509632767606765 0.9378061844446265 0.9056712709810146 1.2744673067997783 0.9604217126627079 1.1024125457257923 1.322399428349475 0.8641865601324056 0.8588143256075846 1.2639286295383108 1.0 9.968517947633421 -3.925388132234568 15.911944236713715 0.9732501136224022 0.995641536379011 0.0 0.18947753942764778 0.0 0.0 0.022205624589269595 0.0 0.00011874405285804296 3.925388132234568 0.02239142275660877 EELEQQT(ph)DGDCEEDEEEENDGETPK ddPTM_A549_PD325901_60min_R1 3 EELEQQTDGDCEEDEEEENDGETPK 25 0 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EELEQQT(1)DGDCEEDEEEENDGETPK;EELEQQT(1)DGDCEEDEEEENDGETPK;EELEQQT(1)DGDCEEDEEEENDGETPK 151.41 1.1606e-32 37162100.0 2816.13 2889.56 2932.3 2678.3 2057.66 2461.1499999999996 2791.25 2861.21 2290.51 2360.3999999999996 3161.17 True False 3102.021444474665 3133.0733621117015 3131.3035113523415 2843.732508139372 1913.137060141635 2441.107210391682 2897.4725461806083 2804.1409219741786 2194.2478301630877 2211.3639411716167 2772.3661303076756 1.1189075680023564 1.1301080791100253 1.1294696891297078 1.025742046496498 0.690073738539475 0.8805140070445059 1.045126224312605 1.011461253735262 0.7914711574980796 0.7976449852697489 1.0 11.436902083081861 -6.527717138531443 24.982001624881864 0.9033504362452591 1.118398014134699 0.5218534390527296 0.10049355295059045 91.7731517369134 473850.9097288312 0.015790814463167633 0.0329675270429227 2.966763050557128e-07 6.527717138531443 0.21504757788943984 EELGGDVKVESTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 EELGGDVKVESTSPK 15 1 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 EELGGDVKVES(0.04)T(0.15)S(0.81)PK 89.04899999999999 9.8987e-06 6499500.0 3886.5 4614.0 4028.8 3496.3 5135.8 3580.0 3468.1 3285.1 6394.9 6359.3 6073.0 True False 4542.44618419784 4848.832892012583 4600.144420611581 4352.8936569548705 4380.330623353119 3958.833223788327 4098.208878186469 3750.772985196813 4946.465360556873 4922.729713274334 4564.906493726711 0.9950797876014028 1.0621976372738535 1.0077193096799015 0.9535559299926082 0.9595663414733152 0.8672320515718611 0.8977640360910791 0.821653847751599 1.0835852535762815 1.078385662453187 1.0 12.156369593410819 -8.812621443827469 24.999989870027683 1.0394708150824157 0.9480769223095109 0.3373225407786208 0.06675646604398533 108.18828191020853 52844.26788530199 0.01293038886478708 0.013765455130704528 1.5394959692974597e-09 8.812621443827469 -0.09139389277290477 EELGGDVKVESTS(ph)PK ddPTM_A549_PD325901_60min_R1 2 EELGGDVKVESTSPK 15 1 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 EELGGDVKVES(0.063)T(0.243)S(0.694)PK;EELGGDVKVES(0.062)T(0.425)S(0.514)PK 107.72 1.1284999999999999e-06 23039000.0 7890.7 8623.8 7888.1 9208.599999999999 9412.400000000001 7310.0 8169.6 8908.6 9187.8 8864.900000000001 8982.2 True False 8691.758055173677 9350.557891228735 8423.433900998667 9777.394307752005 8751.305495017223 7250.46978362278 8480.49859857665 8730.910984338494 8801.668717435154 8305.168701106708 7877.446342857115 1.1033725495388413 1.1870036918382014 1.0693102224220958 1.2411883092821914 1.1109317809511303 0.9204086537761254 1.0765542828820858 1.1083428060738565 1.117325124710761 1.0542970830435971 1.0 12.943512307036277 -14.999999999999998 0.14295139168958979 0.6427322467138048 1.1454780859189826 0.15831207277157933 0.0745904558961623 77.65924843537506 0.741276532270219 8.001117702382528 0.17001077329219755 1.000000000000004e-15 14.999999999999998 0.5027458392051778 EELMS(ph)SDLEETAGSTSIPK ddPTM_A549_MK2206_60min_R1 4 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.557)S(0.442)DLEET(0.001)AGSTSIPK;EELMS(0.565)S(0.435)DLEETAGSTSIPK;EELMS(0.553)S(0.447)DLEET(0.001)AGSTSIPK;EELMS(0.543)S(0.454)DLEET(0.002)AGS(0.001)TSIPK 173.34 1.1636e-34 20692700.0 6495.750000000001 6647.280000000001 6410.700000000001 6311.2 9401.7 7026.16 7716.299999999999 7288.2 9756.9 8885.7 9603.2 True False 7592.073794160077 6985.598159171526 7319.833656973455 7857.444283320537 8018.722384356679 7769.663587612456 9118.251828594985 8321.324669176403 7546.977728567667 6878.414198613336 7218.4604051632405 1.051758043686102 0.9677407323831614 1.0140436112578388 1.0885207983824698 1.110863249817236 1.0763602141607578 1.2631851276863493 1.1527838627783153 1.0455107190405095 0.9528921421655683 1.0 12.817475448271672 -4.464316548933043 18.715339686856886 1.0539561679840992 1.06134278904115 0.0 0.0856558749328351 0.0 0.0 0.011675956666275317 0.0 3.433076263276467e-05 4.464316548933043 0.007386621057050791 EELMS(ph)SDLEETAGSTSIPK ddPTM_A549_PD325901_60min_R1 1 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.548)S(0.446)DLEET(0.005)AGSTSIPK 63.185 0.00085203 74186000.0 11472.0 8870.6 9244.3 8580.9 9904.2 6907.7 8309.0 9162.6 9764.1 11109.0 10999.0 True False 12636.628994759953 9618.156593373405 9871.67378849178 9110.922704362143 9208.563159635109 6851.445981440633 8625.203541859266 8979.844755079352 9353.748832572388 10407.575844126199 9646.192728405662 1.3100120794340127 0.9970935543357229 1.0233751352927183 0.9445097108139587 0.9546318862693006 0.7102746310743732 0.8941562525969614 0.9309211424561237 0.9696829719178118 1.078930945830934 1.0 13.235743919719122 -4.45846780182712 1.270954047468441 0.9523247971872051 3.0670624419775137 0.5834497058048164 0.08825927789706489 4.990664244896222 1.4937065952908424 0.012675103500816463 22.600301446369418 3.4796230428153714e-05 4.45846780182712 2.1147376447903086 EELMS(ph)SDLEETAGSTSIPKR ddPTM_A549_MK2206_60min_R1 1 EELMSSDLEETAGSTSIPKR 20 1 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.533)S(0.467)DLEETAGSTSIPKR 95.12299999999999 8.4824e-07 3338400.0 1335.6 1837.3 1398.7 1468.1 1980.4 1806.9 1652.7 1570.4 2849.0 2325.9 2099.0 True False 1561.0166277150745 1930.8107222572003 1597.056692094276 1827.7845659055142 1689.0857834200174 1998.104958676853 1952.9741971046915 1793.0090091482991 2203.7060489181276 1800.477574592295 1577.7603705470713 0.9893876515442006 1.223766776185228 1.0122301978851922 1.1584677876474676 1.0705591387330544 1.266418523355376 1.2378142039576763 1.136426698641564 1.3967305112081225 1.1411603486833675 1.0 10.6236623908529 -7.24457286563243 23.784830807154727 1.1966118435848216 1.097649962915173 0.18671706269838773 0.10926484593419113 884.3886956191265 1247146.7714183873 0.02200025681376711 0.03803021243088617 5.694126804412583e-08 7.24457286563243 -0.09896188066964862 EELMS(ph)SDLEETAGSTSIPKR ddPTM_A549_PD325901_60min_R1 1 EELMSSDLEETAGSTSIPKR 20 1 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.402)S(0.402)DLEET(0.088)AGS(0.036)T(0.036)S(0.036)IPKR 41.423 0.034720999999999995 6134500.0 2135.8 1754.5 2536.9 2087.7 2185.1 2600.2 2165.0 2601.9 3029.6 2800.2 2521.1 True False 2352.6248437071417 1902.3578724182864 2709.069289618985 2216.6524874892884 2031.6261141857685 2579.0248332935635 2247.390259733459 2550.003063348938 2902.2764477177966 2623.394894114877 2211.020682569645 1.064044702183846 0.8603980448556315 1.2252573261641806 1.0025471516227962 0.918863459849962 1.1664408450020578 1.0164492252155441 1.1533148845922727 1.3126410216772713 1.1865085273946743 1.0 11.110496805293883 -7.836288651858796 1.598414948880998 1.1493881115647244 1.0237854182562718 0.1950404068462065 0.1179863096212961 0.5793408958619343 3.0155734229318267 0.023913757648298735 0.036292125755649295 1.4578449881367222e-08 7.836288651858796 -0.12560269330845264 EELMSS(ph)DLEETAGSTSIPK ddPTM_A549_MK2206_60min_R1 6 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.359)S(0.635)DLEET(0.005)AGSTSIPK;EELMS(0.106)S(0.894)DLEETAGSTSIPK;EELMS(0.013)S(0.987)DLEETAGSTSIPK;EELMS(0.137)S(0.863)DLEETAGSTSIPK;EELMS(0.019)S(0.981)DLEETAGSTSIPK;EELMS(0.14)S(0.86)DLEETAGSTSIPK 325.94 9.437699999999996e-184 75414100.0 13564.199999999999 13987.400000000001 12517.5 11335.83 19031.6 17070.100000000002 14805.1 15342.3 21514.300000000003 17467.3 18172.3 True False 15853.505347149467 14699.298914984132 14292.669724236846 14113.108858884752 16232.076851008063 18876.446651784678 17494.995029681515 17517.118008823178 16641.345401277395 13521.424798433292 13659.616380034564 1.1606113163120435 1.0761135968993396 1.0463448845552923 1.0331995032827592 1.1883259675384084 1.3819163091121094 1.2807823106403553 1.2824019007171308 1.2182879034290484 0.9898832018589294 1.0 13.737629346750424 -4.845381296622785 17.506439718405353 1.140092904305385 11.614498434763856 0.0 0.1255757735147141 2907.6489329666297 329435.4550373477 0.01894112031721639 822.2346835197644 1.4276399860093367e-05 4.845381296622785 10.474405530458471 EELMSS(ph)DLEETAGSTSIPK ddPTM_A549_PD325901_60min_R1 3 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.036)S(0.964)DLEETAGSTSIPK;EELMS(0.121)S(0.879)DLEETAGSTSIPK;EELMS(0.114)S(0.886)DLEETAGSTSIPK 147.9 2.3479e-21 73660200.0 9178.5 8409.2 8484.789999999999 7966.74 9936.4 8096.9 9215.34 8179.41 10097.9 9967.4 11387.500000000002 True False 10110.294563145419 9117.872796089972 9060.618872587125 8458.827436020701 9238.501542719077 8030.961530918636 9566.034806527541 8016.265250926986 9673.520379393163 9338.056662952878 9986.90969131008 1.0123546598146071 0.912982401755742 0.9072495048664604 0.8469914815972542 0.9250610877915302 0.8041488087057225 0.9578573454860861 0.8026772543965414 0.9686199914083926 0.9350296489692113 1.0 13.285822610053051 -8.971117901612043 21.60549144146218 0.9861562038715338 0.8947984925550635 0.20411478373977554 0.0610455505741576 31.92643314488824 23883.401923135625 0.009602413734312925 0.010069342246378937 1.0687646932051033e-09 8.971117901612043 -0.0913577113164703 EELQANGSAPAADKEEPAAAGS(ph)GAASPSAAEK ddPTM_A549_MK2206_60min_R1 1 EELQANGSAPAADKEEPAAAGSGAASPSAAEK 32 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EELQANGSAPAADKEEPAAAGS(0.581)GAAS(0.416)PS(0.003)AAEK 193.6 1.5777999999999995e-77 25628000.0 1563.7 1349.9 1293.8 1317.4 3002.5 2137.7 1926.3 2027.1 2539.1 2670.6 2234.7 True False 1827.6143312054985 1418.6041441109196 1477.2802947247967 1640.163059140333 2560.8362273876996 2363.9099951095836 2276.283775568928 2314.447632733391 1963.997904109519 2067.309605187748 1679.7623154175988 1.0880196051732134 0.8445267113628789 0.8794579335217055 0.9764256788512241 1.5245229660668156 1.4072883844414035 1.355122540061884 1.3778423360795575 1.1692117903128798 1.2307155519641495 1.0 10.714041392292536 -6.5477757207889375 24.99935962060395 1.179284141600893 0.9280350264280867 0.40873363131036144 0.1682363498133103 243.70562099114065 244707.04040807058 0.029620406637273826 0.06166150503697484 2.832854566445503e-07 6.5477757207889375 -0.25124911517280635 EELQANGSAPAADKEEPAAAGS(ph)GAASPSAAEK ddPTM_A549_PD325901_60min_R1 2 EELQANGSAPAADKEEPAAAGSGAASPSAAEK 32 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EELQANGSAPAADKEEPAAAGS(0.7)GAAS(0.3)PSAAEK;EELQANGSAPAADKEEPAAAGS(0.536)GAAS(0.374)PS(0.09)AAEK 289.39 9.921399999999994e-201 56524000.0 6613.6 6545.6 7340.6 6833.1 9355.4 6487.8 7463.2 7093.1 8313.2 7225.3 8402.3 True False 7285.0078033250065 7097.220683785195 7838.777258613709 7255.16506790394 8698.30897837789 6434.965507823233 7747.216160019741 6951.622556070693 7963.825113931737 6769.093324922591 7368.870366568138 0.9886193461044439 0.9631355052715554 1.0637691896681334 0.9845695075353655 1.1804128103326785 0.8732634973493437 1.0513437982527312 0.9433769642100832 1.0807389352461474 0.9186066504349597 1.0 12.84722775860116 -8.797187065066153 24.999832209383943 1.0381266902731214 1.0087320210191453 0.0 0.08397188380226317 557.5023880441057 389881.8091411931 0.012628194314530885 0.013443915328121217 1.5951918970739443e-09 8.797187065066153 -0.029394669253976158 EELQANGSAPAADKEEPAAAGSGAAS(ph)PSAAEK ddPTM_A549_MK2206_60min_R1 1 EELQANGSAPAADKEEPAAAGSGAASPSAAEK 32 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EELQANGSAPAADKEEPAAAGS(0.346)GAAS(0.653)PSAAEK 194.91 2.1623999999999994e-88 18968000.0 1996.2 1450.4 2084.3 2040.8 2815.2 2040.2 2295.4 2816.3 3164.9 2470.3 2146.6 True False 2333.1097575957115 1524.2191648407124 2379.885081384213 2540.7960916149923 2401.0878092728885 2256.0926098248465 2712.4444678611394 3215.5191495570252 2448.055203306768 1912.2575143021384 1613.5399768539037 1.4459572065545176 0.9446429507204712 1.474946462761051 1.5746719189251586 1.4880869663697787 1.3982254187614231 1.6810519149019727 1.9928351300143654 1.5171952591345212 1.185131785845602 1.0 10.65601360695202 -10.525884093303496 1.0080219364650445 1.020896837072797 1.4969135017735582 0.2926046964452075 0.2399579400545073 0.4429715707203656 0.8519453988606848 0.1352453761058195 0.04551171552157506 2.97931145696618e-11 10.525884093303496 0.4760166647007611 EELRHT(ph)PELPLAPR ddPTM_A549_MK2206_60min_R1 1 EELRHTPELPLAPR 14 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EELRHT(1)PELPLAPR 86.641 5.2045e-05 3672400.0 188.6 0.0 0.0 0.0 182.79 177.15 159.93 162.74 364.12 239.45 170.56 True False 220.43106917270376 0.0 0.0 0.0 155.9018331404488 195.89589541734708 188.98721083254867 185.80889337034768 281.64740138015736 185.35807869475252 128.20524478347235 1.7193607761132776 0.0 0.0 0.0 1.2160331927430394 1.5279865948401599 1.4740989040794068 1.449308050416837 2.196847733147233 1.445791699144652 1.0 7.0023114725451965 -6.919094756910729 4.7308001630589605 1.5529805599485544 0.3733643017637781 0.4846624702057801 0.5214688440635824 0.1456342339405392 5.957641588121667 0.08639574460665495 0.16614197266080688 1.2047730472615641e-07 6.919094756910729 -1.1796162581847764 EELRHT(ph)PELPLAPR ddPTM_A549_PD325901_60min_R1 2 EELRHTPELPLAPR 14 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EELRHT(1)PELPLAPR;EELRHT(1)PELPLAPR 98.507 2.1626e-05 9832900.0 562.06 753.2 509.88 699.6800000000001 786.47 541.51 466.70000000000005 490.70000000000005 511.25 502.61 326.59000000000003 True False 619.1199174332971 816.6748073556296 544.4835229575184 742.8976445114275 731.2310603742078 537.100122097068 484.46052388803895 480.91260355329706 489.76394041976585 470.87511882404056 286.4215004245848 2.161569283435523 2.85130413095738 1.900986909678178 2.593721642440155 2.5529894204528896 1.875208813936394 1.6914251310389952 1.679038070956276 1.709941256832154 1.643993618237548 1.0 8.161995983325504 -8.730973389285682 0.23350502513774513 0.7622562782235616 2.7355307513580533 0.5724093212310037 0.33185609584062065 0.6886128117213743 0.14407284879782298 0.48465677535327306 0.4494020653558461 1.857918292638128e-09 8.730973389285682 1.9732744731344918 EELRHT(ph)PELPLAPRPLK ddPTM_A549_MK2206_60min_R1 1 EELRHTPELPLAPRPLK 17 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EELRHT(1)PELPLAPRPLK 49.528 0.01281 1633300.0 251.66 433.45 277.79 350.32 503.91 474.49 229.56 150.06 327.13 356.55 580.95 True False 294.1340555037254 455.51075358536065 317.18479909692496 436.1484157264623 429.78550652554065 524.7002168590292 271.26808052723 171.33146453947631 253.0355773192653 276.0051073652707 436.68408159567474 0.673562577387613 1.0431127966031917 0.7263484346347344 0.9987733331903121 0.9842023665141945 1.2015556301977788 0.6211998375026566 0.39234648516020765 0.5794476785017105 0.6320475579433269 1.0 8.770446131422887 -7.793096549814995 24.999934146829077 0.746887380636754 0.9379596428141025 0.2890764346134841 0.20177598261325763 315.84694119268846 249425.86976198122 0.0375259570756005 0.051852018592778784 1.6102876056381903e-08 7.793096549814995 0.19107226217734852 EELTLEGIR ddPTM_A549_MK2206_60min_R1 2 EELTLEGIR 9 0 P60842;P60842-2;J3KT12;J3QS69;J3KTB5;J3KSZ0;J3KTN0 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ; 103.83 0.0017579 1995110.0 791.09 875.88 772.23 729.7 1209.53 746.4100000000001 659.6700000000001 701.94 1014.71 1100.8200000000002 967.9200000000001 False True 924.6066517064381 920.4585508140397 881.7438259354849 908.4765327574784 1031.6097392547022 825.3946107731418 779.523500093212 801.4421446010928 784.8798051589027 852.1439974473066 727.558750766994 1.2708343494346208 1.2651329529659157 1.2119211335248854 1.2486641550249522 1.4179057542324616 1.134471422277595 1.0714234407481686 1.101549728810506 1.0787854648596842 1.1712373695580935 1.0 9.506919940913052 -7.505319340275487 4.563971968279956 1.047650300518402 1.2771400105693598 0.661301155905625 0.06578784760620006 0.07082043321957573 3.710352087301633 0.009074963803816897 0.014222164656315654 3.123781580357183e-08 7.505319340275487 0.22948971005095786 EELTLEGIR ddPTM_A549_PD325901_60min_R1 2 EELTLEGIR 9 0 P60842;P60842-2;J3KT12;J3QS69;J3KTB5;J3KSZ0;J3KTN0 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ; 91.069 0.0028914 4571100.0 1689.69 1522.2800000000002 1731.69 1498.73 1803.33 1444.02 1689.74 1639.31 1652.54 1992.52 2347.2 False True 1861.2260849159659 1650.5678780421254 1849.2128968979066 1591.30314823721 1676.6703219507665 1432.2603798833045 1754.0439803612078 1606.612676036184 1583.0894906626497 1866.7119471544102 2058.5092801267183 0.9041621055025761 0.801826785031797 0.8983262377054099 0.7730366647359744 0.8145070503872364 0.6957755273248692 0.8520942787555623 0.7804738562739361 0.7690465648836897 0.906827073929683 1.0 11.007384237262302 -10.778973820369915 0.9601813313711258 1.0033149808280346 0.8065478678334033 0.4136936653991429 0.06260135368144076 0.30212118231945023 0.4810635050225557 0.04177472085179862 0.009855982659971422 1.6635129252809666e-11 10.778973820369915 -0.19676711299463134 EELYSKVT(ph)PR ddPTM_A549_MK2206_60min_R1 2 EELYSKVTPR 10 1 Q8TF42 Q8TF42 UBASH3B Ubiquitin-associated and SH3 domain-containing protein B 1 EELYS(0.005)KVT(0.995)PR;EELYSKVT(1)PR 94.68799999999999 0.0002269 40953000.0 4686.700000000001 5158.8 4850.3 4023.3999999999996 6773.4 5533.5 4987.6 4667.1 7559.4 7120.7 7389.5 True False 5477.700381186162 5421.360884983637 5538.145473414499 5009.1331806172875 5777.04183266872 6119.051297159979 5893.782359459888 5328.675717394311 5847.207969881251 5512.128924459068 5554.483210175124 0.9861764225250865 0.976033355371815 0.9970586396353316 0.9018180433854183 1.0400682861163206 1.1016418747923544 1.0610856377535194 0.95934680433147 1.052700629136819 0.9923747567301188 1.0 12.43943697399015 -6.8154142371094935 24.999891581466695 1.029944527568991 0.9683100345788602 0.34819068081314397 0.042264712686664915 82.49346801500491 38208.70414421415 0.006164142691781857 0.0116491405175223 1.5296277819115078e-07 6.8154142371094935 -0.061634492990130685 EELYSKVT(ph)PR ddPTM_A549_PD325901_60min_R1 1 EELYSKVTPR 10 1 Q8TF42 Q8TF42 UBASH3B Ubiquitin-associated and SH3 domain-containing protein B 1 EELYSKVT(1)PR 90.861 0.00025862 30735000.0 4672.4 4650.7 4858.0 4580.7 5567.1 5412.3 4672.1 5373.4 5262.6 4330.8 4552.8 True False 5146.7386083609135 5042.630810633068 5187.693093527149 4863.639435475497 5176.086101452379 5368.224023242346 4849.899322171218 5266.223321649246 5041.431223184469 4057.352548901047 3992.8344625770783 1.2889937353022833 1.2629200779284058 1.2992507308151409 1.2180919296955723 1.2963437753218547 1.3444644584082146 1.2146507368705108 1.3189185204162683 1.2626196428715952 1.016158467607076 1.0 11.963197545721544 -10.522663612472527 0.636586835907465 0.978123153499318 1.2826278353440836 0.8822783776489487 0.03798671787985313 0.21504320597319418 0.1412238800169771 0.03543471353072222 0.0077994683693099 3.0014864529242833e-11 10.522663612472527 0.30450468184476565 EENDRR ddPTM_A549_MK2206_60min_R1 1 EENDRR 6 1 G3V2J9;Q6EMB2-2;Q6EMB2 G3V2J9 TTLL5 Tubulin polyglutamylase TTLL5 0 13.835 0.060686000000000004 449860.0 475.67 820.56 506.22 454.83 901.05 901.8 852.69 968.2 725.73 1130.0 1025.6 False True 555.9514669850478 862.3229991048643 578.0096079730922 566.2633704180948 768.5067386137172 997.2278774336074 1007.6127356018629 1105.445314988144 561.3533137526689 874.7322151809159 770.9152148799787 0.7211577307779585 1.118570476312517 0.749770658065272 0.7345339143504316 0.9968758221140614 1.2935636217646354 1.3070344392654578 1.4339388997015023 0.7281647876674274 1.1346672089188174 1.0 9.590428391292123 -5.230131403194815 21.73276233275179 0.9613366589853998 0.7211553383999814 0.02940068305135346 0.24519514288149233 4749.297335791582 3296450.0435743667 0.03657141523310381 4.755935917232678 5.886655176258673e-06 5.230131403194815 -0.2401813205854184 EENISAPLISS(ph)SPVK ddPTM_A549_MK2206_60min_R1 1 EENISAPLISSSPVK 15 0 A2A2Y4-2;A2A2Y4;A2A2Y4-3;A2A2Y4-5;A2A2Y4-4 A2A2Y4-2 FRMD3 FERM domain-containing protein 3 1 EENISAPLIS(0.005)S(0.497)S(0.497)PVK 167.69 4.2537e-27 11694000.0 2698.8 2589.4 2547.5 2678.6 3863.6 2113.7 2671.3 2702.6 4274.3 3702.6 3168.0 True False 3154.291460674936 2721.189399778367 2908.7738064704113 3334.8571202469216 3295.2695580799723 2337.3703310394953 3156.64063213273 3085.70182636538 3306.1778746545288 2866.18008843262 2381.2981676479867 1.324610039821446 1.1427335882369116 1.2215075986655688 1.4004366045184367 1.3838122427712263 0.9815529876916342 1.3255965485626484 1.2958065765502749 1.3883930704570473 1.2036208347917858 1.0 11.217532559640356 -10.936497798973015 1.185657470316999 0.999468676207168 1.2794280914447484 0.1463128043025419 0.13110879753176938 0.3734546174627971 0.9300744784454761 0.08528182697806169 0.019856230138256478 1.1574498980935564e-11 10.936497798973015 0.2799594152375805 EENISAPLISS(ph)SPVK ddPTM_A549_PD325901_60min_R1 1 EENISAPLISSSPVK 15 0 A2A2Y4-2;A2A2Y4;A2A2Y4-3;A2A2Y4-5;A2A2Y4-4 A2A2Y4-2 FRMD3 FERM domain-containing protein 3 1 EENISAPLIS(0.001)S(0.499)S(0.499)PVK 224.67 4.6729e-54 19138000.0 6162.2 5947.0 6115.3 6109.6 8448.4 7720.7 6011.8 7393.3 6934.0 7816.3 7952.8 True False 6787.782007628127 6448.174560998313 6530.321032286249 6486.9761160916605 7855.013529397754 7657.825178989931 6240.582338783185 7245.834831568348 6642.588093634536 7322.7774840618995 6974.656016952862 0.9732067059837055 0.9245150650189968 0.9362929177314844 0.9300782863447562 1.1262223556695932 1.0979502301441868 0.894751271405298 1.038880600556694 0.9523893475877249 1.0499123492632296 1.0 12.767906351084394 EENISAPLISSS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 EENISAPLISSSPVK 15 0 A2A2Y4-2;A2A2Y4;A2A2Y4-3;A2A2Y4-5;A2A2Y4-4 A2A2Y4-2 FRMD3 FERM domain-containing protein 3 1 EENISAPLIS(0.003)S(0.194)S(0.803)PVK;EENISAPLIS(0.057)S(0.155)S(0.788)PVK 144.18 1.4887e-13 13837800.0 2317.28 2709.9300000000003 2477.87 2008.85 3484.66 2639.8199999999997 2287.19 2255.84 3878.59 3728.3900000000003 3994.69 True False 2708.3802119433876 2847.8538619531128 2829.269225451949 2501.018340180702 2972.0711301011875 2919.1640002293034 2702.7428171331026 2575.6122282202614 3000.0955578355065 2886.144109520687 3002.698225164687 0.9019821536660891 0.9484315933203439 0.9422422812058557 0.8329236415502695 0.989800142149876 0.9721802796447179 0.9001047106506572 0.8577659275363906 0.9991332238093831 0.9611835399684204 1.0 11.552043774230743 -8.803701883536759 22.82535101708162 0.9995908354323285 0.920732522647729 0.3009863199710838 0.045301905750529836 41.01364567407513 22150.543651710806 0.007479239764614767 0.007962221904259804 1.5714411319199302e-09 8.803701883536759 -0.07885831278459954 EENISAPLISSS(ph)PVK ddPTM_A549_PD325901_60min_R1 3 EENISAPLISSSPVK 15 0 A2A2Y4-2;A2A2Y4;A2A2Y4-3;A2A2Y4-5;A2A2Y4-4 A2A2Y4-2 FRMD3 FERM domain-containing protein 3 1 EENISAPLISS(0.327)S(0.673)PVK;EENISAPLIS(0.019)S(0.203)S(0.778)PVK;EENISAPLIS(0.054)S(0.161)S(0.785)PVK 248.1 1.8012999999999998e-76 27674900.0 7409.8 7591.0599999999995 7928.1 6615.160000000001 8440.64 6856.820000000001 6965.99 7698.6900000000005 8001.349999999999 7032.76 8548.3 True False 8162.037441193546 8230.78526702738 8466.148541538205 7023.7634090816 7847.798565027214 6800.980331291428 7231.084561385996 7545.1335884445325 7665.081084944146 6588.710333381669 7496.913292138387 1.0887197334605216 1.0978898843152642 1.1292845750818812 0.9368873742273431 1.0468039657410446 0.9071707336435721 0.9645415759268349 1.0064320200097168 1.0224316043487 0.8788564141846082 1.0 12.872081000970145 -6.248841104356518 24.99016331657152 0.9984682885936483 1.1045572524986333 0.5148923640315117 0.05348623148743938 413.4471965952966 820119.7355543167 0.005484669135225781 0.014400887416109549 5.638439120814605e-07 6.248841104356518 0.10608896390498501 EENPES(ph)DGEPVVEDGTSVK ddPTM_A549_MK2206_60min_R1 2 EENPESDGEPVVEDGTSVK 19 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;H0Y6I0;A0A087WTW2 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 EENPES(1)DGEPVVEDGTSVK;EENPES(1)DGEPVVEDGTSVK 125.18 1.0948e-14 9904500.0 1373.07 726.5 682.19 904.09 1622.17 1495.9499999999998 1089.67 1234.04 1561.06 1324.4099999999999 1579.93 True False 1604.8106476615283 763.4757468676078 778.9348000141516 1125.592090586142 1383.5509418756053 1654.250436068756 1287.6489340830565 1408.9689490890005 1207.4824025005723 1025.2248611573068 1187.5897771502775 1.3513173307304882 0.6428783419638662 0.6558955078606956 0.9477953686053914 1.1650074533274892 1.392947689427127 1.084253972927318 1.1864104728738412 1.0167504181435687 0.8632819858195655 1.0 10.213820864340388 -6.526671172980217 21.375170562072892 1.0659960379120825 0.849736935959804 0.1561879984302642 0.21560803995131655 23.14577899569199 130457.2980856912 0.029285766867690518 0.061319026270575706 2.973916887206118e-07 6.526671172980217 -0.2162591019522785 EENPES(ph)DGEPVVEDGTSVK ddPTM_A549_PD325901_60min_R1 3 EENPESDGEPVVEDGTSVK 19 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;H0Y6I0;A0A087WTW2 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 EENPES(1)DGEPVVEDGTSVK;EENPES(1)DGEPVVEDGTSVK;EENPES(1)DGEPVVEDGTSVK 283.08 1.5109999999999996e-126 16718100.0 3602.46 3798.98 3764.4800000000005 3907.69 4023.44 3953.83 3640.5099999999998 3772.08 4451.68 3976.4700000000003 5076.19 True False 3968.1790872091174 4119.133377121471 4019.960250457203 4149.059136292103 3740.847454514478 3921.6313193681603 3779.0516002135087 3696.842905260485 4264.591370734209 3725.3950055713844 4451.85081061965 0.8913549119263477 0.9252631214180631 0.9029862907507603 0.9319852153164582 0.8402903901431038 0.8808990880856387 0.8488720222157456 0.8304058384979717 0.9579367216352481 0.8368193733457231 1.0 12.120189530894162 -8.929028376483057 5.461988915954098 0.9819099471686825 0.882937258082018 0.0 0.05383244443414593 0.09496115129581761 4.973900758803959 0.0061477872125525485 0.006464735353598016 1.1775290321235004e-09 8.929028376483057 -0.09897268908666457 EENPGLTSPEPQLPKS(ph)PTDLVR ddPTM_A549_MK2206_60min_R1 1 EENPGLTSPEPQLPKSPTDLVR 22 1 K7EIX9;K7EMC4;Q9BUG6-2;Q9BUG6 K7EIX9 ZSCAN5A Zinc finger and SCAN domain-containing protein 5A 1 EENPGLT(0.001)S(0.004)PEPQLPKS(0.927)PT(0.067)DLVR 53.705 0.002132 3048300.0 1371.3 1089.3 1227.1 1144.3 1458.9 1395.8 1886.1 1415.3 2018.1 1772.8 1712.6 True False 1602.7419149338732 1144.7407172235173 1401.1212317644142 1424.6535513695787 1244.2977425931435 1543.5026295429468 2228.779955926155 1615.923109174469 1561.003572243479 1372.323248736927 1287.314154644552 1.2450278039368066 0.8892473628860226 1.0884066074386374 1.1066867758965553 0.9665843711139136 1.1990100660154184 1.731341139911226 1.2552671027070708 1.2126049935918688 1.0660360128766295 1.0 10.330148454802277 -7.282326212624845 24.06462932708629 1.1743823595642096 1.0540110754411092 0.12784904785437035 0.199133749424142 1200.9851722544352 1383704.3893733143 0.03340542165497949 0.053440975199020774 5.2200394766501585e-08 7.282326212624845 -0.12037128412310039 EEPAHLEAAEENQTIVHS(ph)PAPSSEPPGGEDPPLDTDVLVPGAPER ddPTM_A549_MK2206_60min_R1 1 EEPAHLEAAEENQTIVHSPAPSSEPPGGEDPPLDTDVLVPGAPER 45 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 EEPAHLEAAEENQT(0.058)IVHS(0.858)PAPS(0.042)S(0.042)EPPGGEDPPLDTDVLVPGAPER 103.73 3.0885999999999997e-15 10082000.0 564.7 829.36 726.6 575.89 1084.6 685.26 686.69 883.13 1367.6 1019.5 1420.5 True False 660.007554410529 871.5708815170258 829.6428058023162 716.9830758526846 925.0567767609322 757.7737583612267 811.4526843406672 1008.3163819721964 1057.8407836084343 789.194241926499 1067.7506461944326 0.618128920607878 0.816268184546073 0.7770005185754221 0.6714892455538024 0.8663603061800287 0.7096916879067282 0.7599645921384021 0.9443369438041871 0.990718935529266 0.739118486829546 1.0 10.060359055750286 -8.327775221654717 3.091558535564164 0.9949493040978686 0.7482769904122197 0.3359169517755406 0.09970729982803656 0.0822433905345076 1.553978466466341 0.0096628886993339 0.011984800029893399 4.701373752428787e-09 8.327775221654717 -0.2466723136856489 EEPAHLEAAEENQTIVHS(ph)PAPSSEPPGGEDPPLDTDVLVPGAPER ddPTM_A549_PD325901_60min_R1 1 EEPAHLEAAEENQTIVHSPAPSSEPPGGEDPPLDTDVLVPGAPER 45 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 EEPAHLEAAEENQT(0.034)IVHS(0.607)PAPS(0.178)S(0.178)EPPGGEDPPLDT(0.004)DVLVPGAPER 74.39399999999999 6.6352e-07 13078000.0 1096.7 1407.3 1135.4 1302.4 1456.9 1350.9 1301.3 1286.2 1196.9 1610.9 1502.9 True False 1208.036176652131 1525.8981099197802 1212.4550717148477 1382.8462900349903 1354.572370032148 1339.898718289467 1350.8216835986834 1260.54573199562 1146.598455331868 1509.187499082086 1318.052827668049 0.9165309244770076 1.157691162211957 0.9198835177645883 1.049158471501917 1.0277071916978553 1.0165743664918716 1.0248615649105737 0.9563696579793596 0.8699184366991384 1.1450129064646066 1.0 10.36419247950529 -8.337985261383427 4.600261614554088 0.9375510008771667 1.019575427988339 0.0 0.09157162560967724 0.25358172478329505 10.037635267110808 0.011548895379825048 0.014079937633605683 4.592135968669849e-09 8.337985261383427 0.0820244271111722 EEPEALY(ph)AAVNK ddPTM_A549_MK2206_60min_R1 2 EEPEALYAAVNK 12 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 1 EEPEALY(1)AAVNK;EEPEALY(1)AAVNK 185.14 3.1689999999999998e-19 6855300.0 3842.5 4018.4 3874.0 3393.0 5140.0 4235.9 3757.2 3933.0 5989.5 5647.2 6196.9 True False 4491.020059894559 4222.91939602587 4423.391452901421 4224.285152317555 4383.912808916828 4684.1401264371425 4439.834606015454 4490.514794307348 4632.887813266105 4371.493597849264 4658.03870426067 0.9641439981567049 0.9065874425137773 0.9496253109394263 0.9068806466665114 0.9411499318172043 1.0056035219614208 0.9531553702965957 0.9640355264115583 0.994600540572675 0.9384837429218212 1.0 12.185506911804886 -7.7130274281257885 0.6026694521215251 0.9990061433817171 0.9282457654064616 0.16041176450564687 0.029551517855065906 0.38957481153279955 0.2870591838888531 0.00524618318421703 0.010927869205927388 1.9362996719298266e-08 7.7130274281257885 -0.07076037797525547 EEPGLPPQPQPPPPPLPQPGDKS(ph)SWGR ddPTM_A549_MK2206_60min_R1 1 EEPGLPPQPQPPPPPLPQPGDKSSWGR 27 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 EEPGLPPQPQPPPPPLPQPGDKS(0.5)S(0.5)WGR 40.111999999999995 0.02652 1903700.0 355.6 356.52 395.92 417.74 603.72 518.69 403.47 566.59 801.73 694.94 627.69 True False 415.61658641470547 374.6653451799579 452.06740940442205 520.0863187530609 514.9135877430479 573.5774315214439 476.7752763997275 646.9058676091028 620.1394350997301 537.9525713432087 471.8172496372993 0.8808846788331773 0.7940899690886141 0.9581409110242163 1.1023045875344057 1.0913411668159188 1.2156771121919998 1.010508362647274 1.3710941431378347 1.314363634598885 1.1401714790138546 1.0 8.882084354242876 -6.186681787643973 1.5771250044735372 1.1610610835185735 0.8273432340839186 0.5823187613233549 0.10845705696041728 0.28134615722632783 1.2934966683919837 0.020219781022593225 0.08284356840781258 6.506062220951565e-07 6.186681787643973 -0.3337178494346549 EEPGLPPQPQPPPPPLPQPGDKS(ph)SWGR ddPTM_A549_PD325901_60min_R1 1 EEPGLPPQPQPPPPPLPQPGDKSSWGR 27 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 EEPGLPPQPQPPPPPLPQPGDKS(0.5)S(0.5)WGR 64.152 0.00014102 7367600.0 2239.6 2210.8 2461.2 2219.1 3194.4 2852.0 2411.5 2780.6 3242.1 2752.4 2991.5 True False 2466.9625432936195 2397.111874803276 2628.231832397907 2356.1687670582387 2970.036364081743 2828.774257577588 2503.2709521234333 2725.1387516615 3105.8458117064492 2578.612994272478 2623.564464680931 0.9403094821966356 0.9136851436561916 1.0017790177370556 0.8980792348644606 1.1320615155697913 1.078217934287204 0.9541488253187911 1.0387161391869675 1.183826756886712 0.982866260382163 1.0 11.357312524131231 -6.758301293376513 24.999804640714427 1.0767191888168937 0.9412159060425228 0.3602360050122958 0.06874619897123532 65.62911576580619 522830.5776235653 0.011524442485899377 0.02321323751339536 1.7446114024815246e-07 6.758301293376513 -0.13550328277437085 EEPGS(ph)PLSPAPR ddPTM_A549_MK2206_60min_R1 2 EEPGSPLSPAPR 12 0 B2RBV5 B2RBV5 LOC93622 1 EEPGS(0.976)PLS(0.024)PAPR;EEPGS(0.997)PLS(0.003)PAPR 115.57 2.6036e-05 16244200.0 1449.12 1617.28 1755.75 1272.63 2189.67 1803.22 1844.85 1565.31 2382.35 2046.3899999999999 2030.0 True False 1693.6960284175416 1699.5926440386024 2004.7417510148869 1584.4244071305316 1867.5724436383096 1994.0355435194376 2180.0353648748037 1787.1974860608268 1842.7515288312052 1584.10907772042 1525.8949748501923 1.1099689404140174 1.113833305732895 1.3138137185435756 1.0383574448078154 1.2239193879130916 1.3067973722865205 1.4286929315622348 1.1712454104099062 1.207652924482644 1.0381507927017997 1.0 10.575439951633284 -10.442827126217976 0.8107012621706428 1.001683365272525 1.2156444665460693 0.33606389129061787 0.10434799458166581 0.5460369796180143 0.6550161586594616 0.06818261464589682 0.020598032868320047 3.6072220229842014e-11 10.442827126217976 0.21396110127354429 EEPGS(ph)PLSPAPR ddPTM_A549_PD325901_60min_R1 2 EEPGSPLSPAPR 12 0 B2RBV5 B2RBV5 LOC93622 1 EEPGS(0.999)PLS(0.001)PAPR;EEPGS(0.999)PLS(0.001)PAPR 145.29 7.7183e-12 16642700.0 2341.3 2467.5 2240.1 2203.6 2525.3 2025.5 1885.23 2194.8 2216.6 2391.6 2840.6 True False 2578.9870524260373 2675.4448846920013 2392.1266568155975 2339.7113672612927 2347.931639812056 2009.0049995523837 1956.9734592874402 2151.022992212708 2123.444010434137 2240.5939678469904 2491.224208047017 1.0352288020064728 1.073947851040434 0.9602213438231212 0.9391813710318342 0.9424810630162853 0.8064328345329196 0.7855469021881415 0.8634401453167444 0.852369691806584 0.8993947476142635 1.0 11.282639153403176 -6.024142146143669 1.6448512700264972 0.9045953750705374 1.060148211450122 0.515422803518438 0.06115898366594358 0.36471289057100675 1.807039817253878 0.011670846119132607 0.05615350188993446 9.459275052230732e-07 6.024142146143669 0.1555528363795845 EEPGSPLS(ph)PAPR ddPTM_A549_MK2206_60min_R1 2 EEPGSPLSPAPR 12 0 B2RBV5 B2RBV5 LOC93622 1 EEPGS(0.001)PLS(0.999)PAPR;EEPGSPLS(1)PAPR 196.02 1.9985e-24 15111900.0 2730.3 2920.4 2137.44 2388.8999999999996 3126.2 2667.2 2662.0 2909.9 3670.8 3077.0 2900.7 True False 3191.107890573876 3069.0358859630583 2440.561132444404 2974.180607241795 2666.340121252098 2949.4413336559296 3145.6509425138765 3322.3872361950025 2839.3696610630636 2381.9035629306895 2180.3761347526865 1.463558438248928 1.407571765736268 1.1193303272516462 1.3640676761393498 1.2228808042583592 1.3527213431871816 1.4427102243396541 1.5237679330827252 1.3022384605145776 1.0924278270000702 1.0 11.09036131917524 -10.23598080502924 0.8339808607548537 1.014349724106454 1.3516639780107682 0.5307978898292897 0.11070458767618323 0.3180600820985418 0.4287917410545138 0.058663536892714724 0.022427695106208644 5.80790086745389e-11 10.23598080502924 0.33731425390431413 EEPGSPLS(ph)PAPR ddPTM_A549_PD325901_60min_R1 2 EEPGSPLSPAPR 12 0 B2RBV5 B2RBV5 LOC93622 1 EEPGS(0.007)PLS(0.993)PAPR;EEPGSPLS(1)PAPR 158.25 7.3612e-14 14011600.0 2632.9 2887.9 2405.3 2433.0 3153.3999999999996 2731.8 2965.2 2865.6000000000004 2600.8 3755.0 3122.0 True False 2900.1900697614633 3131.273468085932 2568.5381222438987 2583.280884256091 2931.9160626394223 2709.553126525404 3078.0423086197006 2808.4433599802874 2491.4974205256276 3517.90865916769 2738.0137919885874 1.0592313589680968 1.1436295453470762 0.9381026968379146 0.9434871700846637 1.0708185879918473 0.9896053608106508 1.1241880218522036 1.025722868233088 0.9099652557688842 1.284839641590218 1.0 11.418913998454183 -8.635395429116567 7.657985952063853 0.957595431053863 1.03714318163745 0.0 0.1177630917443147 0.26393052268800893 16.904516225914755 0.01160452067744073 0.013155436192409801 2.315285601144683e-09 8.635395429116567 0.07954775058358687 EEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 EEPLSEEEPCTSTAIASPEK 20 0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 EEPLS(0.979)EEEPCT(0.057)S(0.051)T(0.046)AIAS(0.867)PEK 44.555 0.013500999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_A549_MK2206_60min_R1 2 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 EEPLS(1)EEEPCT(0.001)S(0.001)T(0.004)AIAS(0.995)PEKK;EEPLS(1)EEEPCTSTAIAS(0.999)PEKK 143.08 3.6658e-22 45717000.0 5084.3 4964.9 4103.5 3180.0 5421.9 4851.2 3735.4 5699.700000000001 5789.8 5920.3 6193.599999999999 True False 5942.405540799457 5217.5922031975 4685.438003867062 3959.1001427556266 4624.345692347501 5364.550764034059 4414.073828199227 6507.649929599184 4478.419544410734 4582.9001181730755 4655.558185336033 1.276410970335782 1.1207232291998301 1.0064180958204205 0.8504028915857839 0.9932956496845333 1.152289489353005 0.9481298809888302 1.397823777629249 0.9619511487401776 0.9843932640790929 1.0 12.184738436965693 -5.42768272922413 2.5687391302409748 1.0119392166402796 1.2891024964466298 0.20631912881177883 0.13584674623269236 0.3780035008382816 3.9104576039656362 0.018356223747432013 0.18986497375971337 3.73522932695189e-06 5.42768272922413 0.27716327980635014 EEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_A549_PD325901_60min_R1 2 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 EEPLS(1)EEEPCTSTAIAS(1)PEKK;EEPLS(1)EEEPCTST(0.001)AIAS(0.999)PEKK 135.35 2.3331e-18 78296000.0 5667.5 6558.9 5958.2 5896.5 6241.4 5081.2 5618.0 5158.6 4882.0 6215.9 6460.2 True False 6242.860427807014 7111.64152146155 6362.559281567203 6260.7134130768745 5803.025595661092 5039.8203918664885 5831.796064287557 5055.707676156591 4676.826517612315 5823.427013187867 5665.636354581891 1.1018815958349166 1.2552237871232683 1.123008764306184 1.1050326955795062 1.0242495692417837 0.8895418054479802 1.0293276340567268 0.8923459537017336 0.8254724138498741 1.027850474109297 1.0 12.468022290847301 -6.805762504903198 1.29505352008608 0.9188746356516301 1.1763165826937592 0.6324529996326074 0.07110969267794963 0.19880164180788948 0.6618343641959 0.012012022173627328 0.032419606433519856 1.564002687872817e-07 6.805762504903198 0.2574419470421291 EEPLS(ph)EEEPCTSTAIASPEKK ddPTM_A549_MK2206_60min_R1 2 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLS(0.999)EEEPCT(0.001)STAIASPEKK;EEPLS(1)EEEPCTSTAIASPEKK 114.35 6.7678e-15 14530100.0 3727.4 3301.8 3177.8 2508.02 4208.7 3592.8 3404.0 3411.8 4332.4 5217.8 5548.0 True False 4356.493993819387 3469.847516871945 3628.4598242204825 3122.4850125892954 3589.6058052311764 3972.9877112923764 4022.46273791031 3895.4330981992916 3351.1183174211646 4039.0953560805174 4170.278482989591 1.0446530157612643 0.8320421600200856 0.8700761445598498 0.7487473619149883 0.8607592562158722 0.9526912237391445 0.964554946226681 0.9340942371327519 0.8035718312554546 0.9685433173242112 1.0 12.025928011884348 -7.228565445687702 22.301384395464336 0.9149367363739263 0.8622054914590966 0.1029433838885434 0.08196432608875251 421.0855984585161 285659.1359711804 0.013958855065890166 0.02417494865392866 5.907919299107787e-08 7.228565445687702 -0.05273124491482961 EEPLS(ph)EEEPCTSTAIASPEKK ddPTM_A549_PD325901_60min_R1 2 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLS(1)EEEPCTSTAIASPEKK;EEPLS(1)EEEPCTSTAIASPEKK 146.5 4.2448e-22 19512600.0 5223.5 4513.4 4864.7 4887.5 5852.0 4205.3 4325.4 4690.799999999999 4898.3 4899.5 6017.3 True False 5753.78587466254 4893.760057778678 5194.847795817523 5189.3897746821385 5440.975708304021 4171.053431062772 4490.005463949697 4597.238314138589 4692.441485297096 4590.144733846097 5277.2102468074745 1.0903082510580997 0.9273384665201144 0.9843928046945299 0.983358542104995 1.031032582337537 0.7903898529694001 0.8508293689200636 0.8711493571664604 0.8891897926818165 0.8698051658303688 1.0 12.365559747060688 -5.259668997182234 23.795750344062398 0.9348756497121603 1.09030835095099 0.29888276670705427 0.07177554352744979 86.29992959933301 1159752.4891168047 0.01045663707801686 0.09232886552306323 5.499598727659872e-06 5.259668997182234 0.1554327012388298 EEPLSEEEPCTST(ph)AIASPEKK ddPTM_A549_MK2206_60min_R1 1 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLSEEEPCT(0.002)S(0.09)T(0.569)AIAS(0.338)PEKK 89.365 1.8345e-06 4369000.0 1675.6 1901.4 1980.8 1790.0 2426.7 2068.2 2096.1 1729.9 2173.0 2526.6 2319.4 True False 1958.4003155131613 1998.1731384639627 2261.7072250663755 2228.5500803561526 2069.7356446300523 2287.0555512399505 2476.9342376421273 1975.1186225965632 1680.8189695679503 1955.8393052000913 1743.4289678165212 1.1233037603854152 1.1461167477138368 1.2972752356518136 1.2782568842751303 1.187163734707356 1.3118145869196323 1.4207256408870226 1.1328930854408203 0.9640880131027167 1.1218348101956765 1.0 10.767711870533839 -8.57613690033372 4.411978213363735 0.9839118528363424 1.2524284187264174 0.5351475971315731 0.08907755803386451 0.0848684159142883 3.4936799423527485 0.013870127932975816 0.01588119616130501 2.6537688966952175e-09 8.57613690033372 0.268516565890075 EEPLSEEEPCTSTAIAS(ph)PEKK ddPTM_A549_MK2206_60min_R1 1 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLSEEEPCT(0.009)S(0.009)T(0.009)AIAS(0.973)PEKK 65.428 0.00057245 4078300.0 1347.1 1322.3 1256.6 872.99 1889.4 1579.5 1036.4 1293.6 1662.1 1408.7 1721.1 True False 1574.4575465670696 1389.5994220000514 1434.8047753525882 1086.87258919001 1611.471762873046 1746.6416416127556 1224.7004646211058 1476.971761483851 1285.6370038282982 1090.4736916153595 1293.7033700564853 1.2170158809266503 1.0741252238829517 1.109067819225007 0.8401250351095209 1.2456269344051305 1.3501098335521027 0.9466624985043003 1.1416618335154867 0.9937649028247991 0.8429085962477995 1.0 10.337291148046507 -8.770042493168223 24.38872628261111 0.9970556333057109 1.1112967509028768 0.2050828309698649 0.13914704517787413 202.28942659550424 573462.843245298 0.02227787055416304 0.0239063881497022 1.6980774974081359e-09 8.770042493168223 0.11424111759716593 EEPLSEEEPCTSTAIAS(ph)PEKK ddPTM_A549_PD325901_60min_R1 1 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLSEEEPCTS(0.007)T(0.006)AIAS(0.987)PEKK 98.7 1.7544000000000001e-07 8573600.0 2853.7 3068.3 2892.0 3528.8 3108.7 2607.1 2751.1 2885.5 2903.4 3319.4 3666.4 True False 3143.4055232170954 3326.8764091997878 3088.268511008752 3746.765961513728 2890.3556364327947 2585.8686419812498 2855.794615959685 2827.94643886904 2781.3801948454743 3109.81251750765 3215.456043224523 0.9775924413088309 1.0346514971678886 0.9604449476198639 1.1652362561163787 0.8988944639822501 0.8041996554206008 0.8881460600207234 0.8794853360934517 0.8650033331061342 0.9671450878827964 1.0 11.650807651963225 -6.863860434127747 19.98750042543122 0.9144952153557764 1.029683147243511 0.4561644882097192 0.06926533815213744 2.5778172604281453 493.88112482348515 0.011323449998788393 0.021399401803104734 1.3681684327056264e-07 6.863860434127747 0.11518793188773468 EEPLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 EEPLTPR 7 0 O15357;O15357-2;A0A0A0MTP6 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 EEPLT(1)PR;EEPLT(1)PR 71.692 0.021536000000000003 3668900.0 608.85 725.07 461.86 478.94 500.94 379.03999999999996 500.51 561.3299999999999 592.53 786.3499999999999 549.26 True False 711.6089950466629 761.972965975632 527.358692936771 596.280321500434 427.2523895912055 419.1497612136114 591.4461882936216 640.9002465010276 458.32290107597686 608.7129888562066 412.86358319518064 1.7235935161427178 1.845580470136574 1.2773194691948964 1.4442550657671915 1.0348512365383957 1.0152257992089821 1.4325462752524152 1.5523293227778896 1.1101073568392332 1.47436832317671 1.0 8.689521360381978 -2.0000000000000004 0.25483490185360236 1.0391154138375875 6.140921611413202 0.2662870563492564 0.23862254756815535 24.983737298121053 0.3049494423149869 0.09485429445486894 55.885110096240474 0.00999999999999999 2.0000000000000004 5.101806197575614 EEPPPLT(ph)PPAR ddPTM_A549_MK2206_60min_R1 1 EEPPPLTPPAR 11 0 Q9C0C2;E9PKK0;E9PKE7 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EEPPPLT(1)PPAR 47.288000000000004 0.034391000000000005 1258100.0 394.76 631.72 270.95 402.98 764.75 355.16 506.23 434.26 728.79 459.71 569.32 True False 461.3858370446263 663.8718497057191 309.37478424461546 501.7101180904597 652.2562880581994 392.74279546387214 598.2054382527423 495.81768486547367 563.7202286384847 355.8611917175388 427.94213156734594 1.07815006518473 1.551312200260059 0.7229360266808146 1.172378415401487 1.5241693676415984 0.917747439415335 1.3978652582343407 1.1586091863624932 1.3172814431097237 0.8315638154490437 1.0 8.741271911295337 -10.989857485246755 1.2648584940420489 1.000019423429696 1.2163928408540843 0.15457700029034105 0.24110975975727778 0.8291104401493015 2.3606271844388935 0.1538211207040005 0.035240063054848336 1.0236288433793265e-11 10.989857485246755 0.21637341742438831 EEPS(ph)PVKAEVAEK ddPTM_A549_MK2206_60min_R1 2 EEPSPVKAEVAEK 13 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK 156.17 6.4298e-19 110720000.0 16119.0 16819.1 17451.1 15859.0 30559.0 21037.5 20319.7 22278.7 31896.0 21759.0 23133.0 True False 18839.493128286387 17675.120349815534 19925.92839022407 19744.455711937575 26063.8115812625 23263.674286437687 24011.526467542913 25436.773950657287 24671.60692744562 16843.626787718185 17388.43766167955 1.0834494446734946 1.0164869721888685 1.1459297711453753 1.1354933718657307 1.4989162389615742 1.3378818004854984 1.3808903901964267 1.462855631171199 1.4188512739023496 0.9686682101887732 1.0 14.085840692929821 -6.540067475701328 24.7647255905758 1.2666109798143863 1.0862923042651287 0.2453155731819031 0.16571687780887878 310.51401298505914 447373.176286189 0.02815426345054556 0.05861808026081901 2.883583450158637e-07 6.540067475701328 -0.18031867554925762 EEPSQNDIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 EEPSQNDISPK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EEPSQNDIS(1)PK;EEPSQNDIS(1)PK 199.96 5.1893e-24 201259000.0 13267.6 15130.1 15006.7 13918.7 19669.1 13401.5 14164.7 14231.2 19498.5 18176.6 18927.6 True False 15506.846518323251 15900.157464117809 17134.87571405673 17328.782124834197 16775.80144549922 14819.63783480427 16738.2426391534 16248.516181222143 15082.120882706255 14070.49343580304 14227.354544815023 1.0899318260100943 1.1175765258420736 1.2043613350664206 1.2179904612800592 1.1791230332144176 1.0416298959953239 1.1764831322948535 1.1420616622746431 1.0600790776105835 0.9889746819397883 1.0 13.7963798095175 -9.041106770422742 0.7502852137841478 1.0100067544485445 1.1550403228172985 0.5753149482997375 0.05015642006481555 0.2985039335225529 0.3597343537075994 0.015023484239116367 0.01295644423785962 9.096895997846482e-10 9.041106770422742 0.14503356836875403 EEPSQNDIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 EEPSQNDISPK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EEPSQNDIS(1)PK;EEPSQNDIS(1)PK 211.22 6.740899999999999e-31 256260000.0 29847.0 31490.0 31846.0 32198.0 36375.0 29387.0 31865.0 34270.0 28564.0 32767.0 34882.0 True False 32877.0454677999 34143.77281416459 34007.2610655549 34186.79733303642 33820.1454869376 29147.682015228784 33077.640012197066 33586.45796570506 27363.55441398572 30698.08602794881 30591.735135216488 1.0747035211465537 1.1161110235574405 1.111648650043604 1.1175174334482707 1.1055321098150017 0.9527959720622272 1.0812606694583617 1.0978931994949552 0.8944753964767902 1.0034764583395563 1.0 14.900854317108498 -8.086527069488463 0.887784444094365 0.9538378618955393 1.1009098701464908 0.3443743384033088 0.05879225876124213 0.3474739393504867 0.5458203510382629 0.01328729541877699 0.019505235975728317 8.193565512581744e-09 8.086527069488463 0.14707200825095146 EEPVAIES(ph)PGQDLLGESR ddPTM_A549_PD325901_60min_R1 2 EEPVAIESPGQDLLGESR 18 0 Q96RG2-4;Q96RG2;Q96RG2-2 Q96RG2-4 PASK PAS domain-containing serine/threonine-protein kinase 1 EEPVAIES(1)PGQDLLGESR;EEPVAIES(1)PGQDLLGESR 136.01 7.3655e-13 3077600.0 936.98 997.55 958.53 677.35 859.59 768.81 909.89 910.21 855.6700000000001 853.88 877.8299999999999 True False 1032.1015198317807 1081.6170394020298 1023.5816099091356 719.1883711265363 799.2153638245135 762.5490662581427 944.5163618609126 892.0551475040685 819.7091655725794 799.9658710759278 769.8624750228518 1.340631026081827 1.4049483829821998 1.3295642314281557 0.9341777193455086 1.0381274445163604 0.9905003698686679 1.226863748402436 1.1587201304721206 1.0647475259113623 1.039102303372018 1.0 9.588456941656636 -6.173602613477681 5.980224003231518 1.0470683583531488 1.369187832455534 0.7497777098383016 0.0776115081077766 0.08681658124847681 4.769923596329991 0.011496167120518559 0.030935891440388275 6.704978452591085e-07 6.173602613477681 0.3221194741023852 EEPVDS(ph)RTPVTER ddPTM_A549_MK2206_60min_R1 2 EEPVDSRTPVTER 13 1 P51608;P51608-2 P51608 MECP2 Methyl-CpG-binding protein 2 1 EEPVDS(0.551)RT(0.444)PVT(0.005)ER;EEPVDS(0.497)RT(0.497)PVT(0.006)ER 55.173 0.0051099 9152100.0 139.77 111.23 330.12 349.73 413.8 256.14 243.98 288.85 479.23 310.57 332.25 True False 163.35975895158438 116.89113189825736 376.93597997723765 435.4138656999763 352.9305681575453 283.24456478802847 288.3080078717265 329.7953720660253 370.68517017305527 240.4120212997675 249.7431553664908 0.6541110554635969 0.46804538737697543 1.5092945367175132 1.7434466424556025 1.4131741374038056 1.134143453791057 1.1544180558167565 1.320538180844477 1.484265583291304 0.9626370778689405 1.0 7.964301328836919 -5.755270759627813 24.999771982313618 1.288459105940844 0.5610779350911992 0.6161609368007503 0.22546208567489276 78.97012192743007 320035.19142419804 0.0344665324579756 0.12703494924180508 1.7568279831792009e-06 5.755270759627813 -0.7273811708496447 EEPVDS(ph)RTPVTER ddPTM_A549_PD325901_60min_R1 2 EEPVDSRTPVTER 13 1 P51608;P51608-2 P51608 MECP2 Methyl-CpG-binding protein 2 1 EEPVDS(0.555)RT(0.44)PVT(0.005)ER;EEPVDS(0.55)RT(0.445)PVT(0.005)ER 64.13600000000001 0.0017115 11399900.0 597.4300000000001 343.4 271.376 381.45 432.08 345.55 184.53 342.28 392.28 483.83 466.03 True False 658.0806537952797 372.33952316240465 289.79320727645603 405.01130016419467 401.7321913950787 342.7359553667376 191.55239012869055 335.45295688653454 375.7938357904465 453.2808912290557 408.71126440757274 1.6101358369683498 0.9110087134547442 0.7090414004040517 0.9909472418169312 0.9829241970548324 0.8385772187207358 0.46867411498028044 0.820757796760933 0.9194604321345533 1.1090491765282924 1.0 8.674938195504216 -5.262068958863769 7.273768481317151 0.8985703393803898 1.618944725957231 0.6174010102765676 0.16543980254591092 0.05265265794282535 24.138689447493146 0.022595586872926718 0.18670988482089051 5.46929112597207e-06 5.262068958863769 0.7203743865768412 EEPVLT(ph)LVDEAIVK ddPTM_A549_MK2206_60min_R1 1 EEPVLTLVDEAIVK 14 0 Q02156 Q02156 PRKCE Protein kinase C epsilon type 1 EEPVLT(1)LVDEAIVK 195.43 1.0491999999999998e-62 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EEPVS(ph)S(ph)GPEEAVGK ddPTM_A549_MK2206_60min_R1 1 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 2 EEPVS(1)S(1)GPEEAVGK 75.589 0.00097419 8471900.0 4423.9 3880.4 3402.7 3252.7 4619.9 4445.7 4316.1 4488.5 5574.6 4217.2 5404.1 True False 5170.54616602929 4077.8957854715277 3885.2540260164365 4049.6116460192525 3940.3188299445255 4916.141023183174 5100.279501496674 5124.758620454746 4311.962000806947 3264.5315910273966 4062.1128244275515 1.2728711361575595 1.0038854068624252 0.9564613771071121 0.9969224935523398 0.9700170823048989 1.2102423629447012 1.2555730778392216 1.2615992814470747 1.0615071976526416 0.8036535990325299 1.0 11.988014595438848 -9.291252029505277 2.5137598694550296 1.0210045392633733 1.1071632988967242 0.1792335023604218 0.1339411475442114 0.5058079695338125 6.533711641220783 0.02553571655230877 0.023236677912803 5.113849827968372e-10 9.291252029505277 0.08615875963335085 EEPVS(ph)S(ph)GPEEAVGK ddPTM_A549_PD325901_60min_R1 2 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 2 EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK 135.91 5.1262e-09 44401000.0 16901.1 15072.6 17466.6 16187.900000000001 19922.1 13775.8 16708.300000000003 17356.4 15960.0 18149.6 17666.1 True False 18616.88723006778 16342.82089929431 18651.988511198306 17187.789817611676 18522.84042351392 13663.614452151935 17344.143499632588 17010.212986167597 15289.256702395043 17003.63115856988 15493.28169463472 1.2016103235581623 1.054832747600128 1.2038759043319684 1.1093705101588491 1.1955401566040285 0.8819057654443607 1.1194622186233674 1.0979089725102065 0.9868313894847514 1.097484154338857 1.0 13.919355139114288 -7.345811923755964 0.5550457621801466 0.993880153332374 1.1642020509080389 0.1857365445387219 0.08648968889162069 0.7147418921587917 0.41799892580717735 0.017778326151582525 0.05214229704788233 4.5101197820464496e-08 7.345811923755964 0.17032189757566485 EEPVS(ph)SGPEEAVGK ddPTM_A549_MK2206_60min_R1 2 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.738)S(0.262)GPEEAVGK;EEPVS(0.769)S(0.231)GPEEAVGK 240.11 1.8209e-57 155859000.0 11443.900000000001 12307.6 10959.8 9972.6 14609.0 11968.0 11889.7 12797.7 17338.7 15839.0 15046.0 True False 13375.350543507455 12934.004269990048 12514.064441277498 12415.887447687031 12460.035452425283 13234.445816284564 14049.904587230383 14611.813166312519 13411.512134214378 12260.958899336758 11309.662951525117 1.182648024157411 1.1436242021912675 1.1064931373211229 1.097812331004324 1.1017158960289828 1.170189233137128 1.2422920689546935 1.2919760057342915 1.1858454307345936 1.0841135542136875 1.0 13.465268314588158 -10.636276344596551 1.00877266223467 1.0040252458017411 1.1674166024470713 0.36790370455161603 0.06115903851350732 0.35335012680128397 0.6632536748680964 0.038852748786919626 0.011549036667686084 2.3105940752468006e-11 10.636276344596551 0.16339135664533022 EEPVS(ph)SGPEEAVGK ddPTM_A549_PD325901_60min_R1 1 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.5)S(0.5)GPEEAVGK 281.51 2.6453999999999995e-99 65248000.0 5973.3 6328.6 8223.9 6441.2 7944.9 6619.2 6411.6 6628.4 7793.3 7028.3 7910.9 True False 6579.705018688953 6861.9333322236325 8782.023308328104 6839.0582949734235 7386.877632417051 6565.295429788763 6655.596946562141 6496.191362120794 7465.774702930777 6584.531938542821 6937.909451326879 0.9483699758333658 0.9890491336567219 1.2658025259537709 0.98575202558538 1.064712314889654 0.9462930405546222 0.959308707220048 0.9363326817242323 1.076084194425879 0.9490657070024927 1.0 12.760285296376878 EEPVSS(ph)GPEEAVGK ddPTM_A549_MK2206_60min_R1 2 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.013)S(0.987)GPEEAVGK;EEPVS(0.013)S(0.987)GPEEAVGK 263.41 1.9841999999999995e-83 147586000.0 17521.9 19723.1 17697.7 15515.4 23295.0 20024.9 17354.4 21005.6 25868.9 23499.4 21907.5 True False 20479.168350674445 20726.921545828656 20207.49997832048 19316.673696512767 19868.336358699897 22143.921626547177 20507.469841007838 23983.208126952046 20009.635454144656 18190.869218957894 16467.263133758912 1.2436291437337197 1.2586743393525535 1.227131662024265 1.1730348595033007 1.2065354271268414 1.3447238588876838 1.245347795467375 1.4564173738005668 1.21511603304156 1.104668642943191 1.0 14.007313177998443 -10.126483037296952 0.896004003452505 1.017427283108249 1.2628867449916734 0.5019140074326476 0.07905770008848328 0.26286536608481503 0.42010303058817333 0.03437720144235578 0.015329627252332655 7.47337823192141e-11 10.126483037296952 0.2454594618834245 EEPVSS(ph)GPEEAVGK ddPTM_A549_PD325901_60min_R1 3 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.205)S(0.795)GPEEAVGK;EEPVS(0.018)S(0.982)GPEEAVGK;EEPVS(0.055)S(0.945)GPEEAVGK 326.57 2.965899999999999e-157 352186000.0 38696.1 41471.4 41582.4 39020.7 47085.0 38079.3 37893.0 39858.3 40061.7 43965.9 40242.8 True False 42624.49958543679 44966.34042189094 44404.43171928436 41430.920016560485 43777.91203443177 37769.19480595167 39335.038850845245 39063.29493826857 38378.04606731452 41189.88557073256 35293.19072012762 1.2077258733404386 1.27407977302111 1.258158608310827 1.173906897370221 1.2404067510242234 1.0701552915818404 1.1145220380545693 1.1068224249838332 1.0874065303885267 1.1670774087093823 1.0 15.107102244011614 -7.277689310455589 0.25465186221550334 0.9915451654737893 1.3327604866321896 0.4580625980028944 0.06084723745524246 0.9139398134613579 0.11472491459458731 0.03221649636562365 0.10032424529637138 5.276071708714464e-08 7.277689310455589 0.34121532115840025 EEQNSSSLLEENKVHADLVISKPVS(ph)KSPER ddPTM_A549_PD325901_60min_R1 1 EEQNSSSLLEENKVHADLVISKPVSKSPER 30 3 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 EEQNSSSLLEENKVHADLVIS(0.077)KPVS(0.462)KS(0.462)PER 130.69 5.0873e-28 10677000.0 1122.9 872.77 1007.5 970.76 1039.7 1285.7 991.79 1317.4 1124.2 1335.3 1912.4 True False 1236.8959813647102 946.3213908865814 1075.8750085896672 1030.721640444079 966.6750587702824 1275.2296854724766 1029.533111178313 1291.1234235196928 1076.9537835108083 1250.9889301162766 1677.1869237024262 0.7374824856338826 0.5642313194271492 0.641475910278772 0.6145538257409847 0.5763669183851771 0.7603384378035691 0.61384518125481 0.7698148639684776 0.6421191152226549 0.7458852155576623 1.0 10.711827771936607 -11.217822376231723 0.4231826046164466 1.1720792617813731 0.6365313673794677 0.28510300633570607 0.10105693342677044 0.9127536530875848 0.15743034782646068 0.22474885903303285 0.01674116247530314 6.055885060797827e-12 11.217822376231723 -0.5355478944019054 EEQRS(ph)PFNDR ddPTM_A549_MK2206_60min_R1 2 EEQRSPFNDR 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 EEQRS(1)PFNDR;EEQRS(1)PFNDR 49.62 0.0080319 11933700.0 1459.67 1251.85 1644.08 1354.94 1909.21 1626.2 1615.4 2034.65 2048.46 2123.69 2067.61 True False 1706.0266104948055 1315.5638179163318 1877.235265845682 1686.9003608255684 1628.367738115194 1798.2834046158043 1908.897269923711 2323.067868354295 1584.4870807184377 1643.9469540332398 1554.1653738669986 1.0977124051155207 0.8464760829428403 1.2078735618557996 1.0854059607751427 1.0477441882928897 1.1570733944106624 1.2282459138657078 1.4947366010183014 1.0195099616561358 1.0577683570074985 1.0 10.601924309233882 -8.957840337268452 24.99995868926588 1.0086063716060565 1.143214607081299 0.11282939132822423 0.14778439305074514 205.84591836356023 122063.66139062654 0.026271352245962734 0.027944598721540273 1.1019443506262094e-09 8.957840337268452 0.13460823547524248 EEQRS(ph)PFNDRFPLK ddPTM_A549_MK2206_60min_R1 7 EEQRSPFNDRFPLK 14 2 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK 138.08 4.8687e-10 138075700.0 16325.119999999999 17537.28 16600.34 14730.440000000002 23471.399999999998 18330.570000000003 16776.72 18272.260000000002 25189.5 22466.999999999996 23791.2 True False 19080.401145136206 18429.852644220715 18954.517829441822 18339.39846127459 20018.788152375575 20270.29875055242 19824.83286261886 20862.40881144936 19484.1184693658 17391.689095990834 17883.188436283705 1.066946267055121 1.0305686097244195 1.0599070684165284 1.0255105529204886 1.1194194046380952 1.1334834849374757 1.1085737274006293 1.1665933558649437 1.0895215100364275 0.9725161236183334 1.0 14.12631636054065 -4.443587866761079 15.48456626075729 1.0645360051716108 1.0730656060183532 0.0 0.057272714926254284 0.0 0.0 0.007919131581169693 0.0 3.6009088918562495e-05 4.443587866761079 0.008529600846742369 EEQRS(ph)PFNDRFPLK ddPTM_A549_PD325901_60min_R1 4 EEQRSPFNDRFPLK 14 2 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK 129.11 2.2525000000000002e-09 189964000.0 12432.800000000001 13242.7 13599.099999999999 12760.9 14851.7 12940.100000000002 12144.400000000001 13257.0 13810.0 14257.199999999999 13126.300000000001 True False 13694.968703456394 14358.708804259686 14522.016704031508 13549.11181089337 13808.567827583523 12834.720115876486 12606.561787670671 12992.578735084697 13229.613725568643 13356.997958851025 11511.848314471436 1.1896411705008811 1.2472982975470142 1.2614843687417265 1.1769710163624123 1.1995091883051399 1.1149139360828861 1.0950945011864934 1.1286266444939037 1.149217168622507 1.1602826578300263 1.0 13.490831867237034 -14.999999999999991 0.07376004541437953 0.3836074570699404 1.3866519528624526 0.33601718465186636 0.05681139695762843 58.863210415230505 0.3234612122288619 6.103144853674567 0.7426493712828056 1.0000000000000204e-15 14.999999999999991 1.0030444957925122 EEQSQITSQVT(ph)GQIGWR ddPTM_A549_PD325901_60min_R1 1 EEQSQITSQVTGQIGWR 17 0 A0A087WY71;E9PFW3;Q96CW1-2;Q96CW1 A0A087WY71 AP2M1 AP-2 complex subunit mu 1 EEQSQIT(0.001)S(0.041)QVT(0.958)GQIGWR 110.37 6.1407e-09 7609000.0 2018.4 2858.0 2536.9 2447.6 3392.7 4898.3 3137.9 3338.3 3712.2 3006.1 3492.3 True False 2223.3064821324533 3098.853690151872 2709.069289618985 2598.7826930970855 3154.4084561796058 4858.409868826191 3257.314501624764 3271.714987654312 3556.189143523239 2816.2943329757636 3062.769239513692 0.7259138081475153 1.01178164197702 0.8845162915535655 0.8485075073790808 1.0299203790751355 1.5862800912802728 1.063519399242093 1.068221185404682 1.1611025400293928 0.9195254727786597 1.0 11.580620957654942 -6.915169642634118 5.669060683774115 1.115354824087027 0.8820657865755201 0.33823353773696807 0.17154356325152997 0.2027832745091436 10.57654861999436 0.02419060313235906 0.04619571773466133 1.215711030976831e-07 6.915169642634118 -0.23328903751150687 EEQTPQNK ddPTM_A549_MK2206_60min_R1 1 EEQTPQNK 8 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;P00338-4;F5GXH2;F5GZQ4;F5H5J4;F5H6W8;F5H8H6;F5GXC7;F5GWW2;F5GXU1 P00338 LDHA L-lactate dehydrogenase A chain 0 66.29899999999999 0.023669 3114300.0 2632.8 1976.1 1468.5 1282.4 1410.3 697.18 700.87 889.68 1035.4 3342.5 3328.1 False True 3077.152274220015 2076.6750493944655 1676.7553816690088 1596.5880575691235 1202.8467382131134 770.9551248493705 828.2090067917737 1015.79486453073 800.8835531940433 2587.426928532931 2501.640919112772 1.230053542341062 0.8301251524663164 0.6702622142364397 0.638216318485615 0.48082309856032945 0.3081797707093775 0.3310663015080138 0.40605142679349454 0.320143289580538 1.0342918956772518 1.0 11.28865900726212 -5.208255743558173 1.3692458553222657 0.5859937554814091 1.5595678407924165 0.40080338397417703 0.23963920298906682 1.39507471174097 2.0679000121954485 0.041900811512898734 1.9342947935919816 6.1907641138326036e-06 5.208255743558173 0.9735740853110074 EEQTPQNK ddPTM_A549_PD325901_60min_R1 2 EEQTPQNK 8 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;P00338-4;F5GXH2;F5GZQ4;F5H5J4;F5H6W8;F5H8H6;F5GXC7;F5GWW2;F5GXU1 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 90.601 0.007288200000000001 10050200.0 6657.6 7537.9 6047.9 6003.0 6852.5 5757.5 4045.7999999999997 5175.9 5769.1 8276.900000000001 9022.599999999999 False True 7333.474650933922 8173.145287262347 6458.346862977119 6373.791676197827 6371.204039841646 5710.612828893044 4199.765132946708 5072.662614084998 5526.6447895856645 7754.295121455415 7912.877398973807 0.9267772367969423 1.0328916872037335 0.8161818435117772 0.8054960736563946 0.8051690578029055 0.7216859987788554 0.5307506891856255 0.6410642245945645 0.6984368025596347 0.9799589618892669 1.0 12.949986689142232 -5.813034347679973 7.603366247206841 0.800366139904215 0.9794358361688495 0.24435429310197232 0.1323365282184163 0.28317762565529075 35.45821861395499 0.022252780931825904 0.07053868062962403 1.5380329948380611e-06 5.813034347679973 0.17906969626463454 EERLS(ph)PR ddPTM_A549_MK2206_60min_R1 3 EERLSPR 7 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 EERLS(1)PR;EERLS(1)PR;EERLS(1)PR 89.88600000000001 0.0035133000000000005 274886000.0 4362.76 4264.1 3851.6 3918.02 5221.5 3615.5 4007.8999999999996 3966.4999999999995 5665.6 5592.3 5661.5 True False 5099.087228758773 4481.12447655632 4397.814796075149 4877.935075886604 4453.424266879226 3998.089810225336 4736.083550902094 4528.763521896792 4382.35064610409 4328.995545978971 4255.5933005489505 1.1982083034346858 1.0529964120345514 1.0334198983506842 1.1462408955426673 1.0464872821152238 0.939490578131515 1.1129079346682784 1.0641908664797934 1.0297860572199857 1.0172484164359765 1.0 12.055144566300703 -2.0000000000000004 0.29132257052333993 1.0137957167307392 2.1047628850754583 0.34400694610317917 0.0552161966032727 38.34563375001375 0.4787706176586645 0.018810688071043233 21.952738900057668 0.00999999999999999 2.0000000000000004 1.090967168344719 EERLS(ph)PR ddPTM_A549_PD325901_60min_R1 4 EERLSPR 7 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 EERLS(1)PR;EERLS(1)PR;EERLS(1)PR;EERLS(1)PR 82.287 0.0041912 394893000.0 4955.9400000000005 5082.13 4630.349999999999 5023.12 5979.17 5381.67 5513.68 5091.32 5396.549999999999 5812.599999999999 5749.1 True False 5459.063380429802 5510.418930836787 4944.593395556492 5333.386714066773 5559.213726216704 5337.843463807004 5723.506109601464 4989.769628536728 5169.75177050814 5445.59144401548 5041.997146547593 1.0827184589280832 1.0929040161416863 0.9806815140588099 1.0577924895730462 1.1025816882945412 1.058676415051521 1.1351664713893226 0.9896415018706176 1.025338099218883 1.0800465144539482 1.0 12.299779586384362 -8.29443472288163 24.985483072121845 1.010625255897005 1.0701615305422476 0.2143842759549962 0.04246086818646733 507.96100186376924 384648.1604023215 0.006047242118579891 0.007311002499174281 5.076510363522014e-09 8.29443472288163 0.05953627464524258 EERPEGS(ph)PTLFK ddPTM_A549_MK2206_60min_R1 1 EERPEGSPTLFK 12 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 EERPEGS(0.836)PT(0.164)LFK 60.474 0.0024241999999999996 4459100.0 1370.7 1297.1 1211.2 1305.0 1786.3 1633.4 1192.5 1361.9 1968.7 1788.9 1600.1 True False 1602.0406496024661 1363.1168496379548 1382.966372677905 1624.725058583676 1523.5376362973018 1806.2453038368308 1409.161814029978 1554.953495643828 1522.7925933678898 1384.7862475549928 1202.7510094865975 1.331980299302603 1.133332534237332 1.1498359691822113 1.3508407357539454 1.266710752500332 1.5017616194791963 1.1716155737266754 1.2928307549769347 1.2660913034842551 1.1513490628007024 1.0 10.232122294957879 -10.534913576894956 0.7041573467004032 0.9867382933128847 1.274662443668741 0.30230704498827554 0.10774865852752924 0.5122549316006719 0.4260126149088559 0.08389359207749403 0.019947831130959146 2.918007629689989e-11 10.534913576894956 0.2879241503558564 EERPEGS(ph)PTLFK ddPTM_A549_PD325901_60min_R1 2 EERPEGSPTLFK 12 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 EERPEGS(0.849)PT(0.151)LFK;EERPEGS(0.825)PT(0.175)LFK 47.545 0.0098164 11769900.0 2366.85 2674.8 2612.6 2944.5 2837.8 2172.05 2512.6 2408.7 2787.3 2985.7 3059.7 True False 2607.130869617122 2900.2147832114156 2789.906746840066 3126.3750775553067 2638.4827178785276 2154.361544940883 2608.218367947477 2360.6565889114036 2670.1594740968476 2797.1823924572495 2683.3762970363496 0.971586009944473 1.0808080798859827 1.039700153094955 1.1650900699272877 0.9832697414792683 0.8028548017362545 0.9719912823364055 0.8797337114137241 0.995074554786036 1.0424115304091315 1.0 11.389833666432185 -6.968030887262731 24.967081057171598 0.9702586024221336 1.0650263755668918 0.3197636443215015 0.07541554119315014 205.25775333481727 160300.33581278136 0.010851226899329174 0.02050678981220498 1.0763886575533908e-07 6.968030887262731 0.09476777314475826 EERS(ph)PQTLAPVGEDAMK ddPTM_A549_MK2206_60min_R1 4 EERSPQTLAPVGEDAMK 17 1 Q92797 Q92797 SYMPK Symplekin 1 EERS(0.884)PQT(0.116)LAPVGEDAMK;EERS(0.981)PQT(0.019)LAPVGEDAMK;EERS(0.998)PQT(0.002)LAPVGEDAMK;EERS(0.997)PQT(0.003)LAPVGEDAMK 129.02 1.4876e-12 93789000.0 9280.8 8928.9 7481.5 7686.799999999999 9996.2 8280.9 8010.4 8279.2 11146.0 10448.699999999999 12024.400000000001 True False 10847.172146224962 9383.342871584553 8542.489198472382 9570.066345073566 8525.772221886069 9157.179341583456 9465.785991702916 9452.80195398662 8621.448796504546 8088.3314130626895 9038.409623442685 1.2001195562204812 1.0381630466544938 0.9451318931503118 1.0588219325944177 0.9432823446918137 1.0131405549304515 1.0472844655271827 1.0458479254435578 0.953867898855051 0.8948843601958687 1.0 13.141853226525829 -5.299908851816524 3.1494235034542117 0.99058179840692 1.2226654150765999 0.6042860411861093 0.0491251345224595 0.1300977330188328 2.0339810891007213 0.00556491818976561 0.07035039094401696 5.012924320628628e-06 5.299908851816524 0.23208361666967992 EERS(ph)PQTLAPVGEDAMK ddPTM_A549_PD325901_60min_R1 2 EERSPQTLAPVGEDAMK 17 1 Q92797 Q92797 SYMPK Symplekin 1 EERS(1)PQTLAPVGEDAMK;EERS(0.999)PQT(0.001)LAPVGEDAMK 161.68 5.905100000000001e-23 36927000.0 9443.7 9584.9 9953.1 9081.5 12631.2 9648.900000000001 9592.0 8798.5 10032.2 10704.7 12219.5 True False 10402.417471915502 10392.653161209479 10628.577218852433 9642.443629417052 11744.028087274399 9570.322557482606 9957.028808943798 8623.007015210274 9610.58152191526 10028.803415124474 10716.57896579262 0.9706845351599682 0.9697733945117081 0.991788261233264 0.8997688217663292 1.0958747306170562 0.8930389621567787 0.9291238221382673 0.8046417651318543 0.8967956614319075 0.9358213518639177 1.0 13.387556809899358 EES(ph)AEELQAAEHPDEVEDPK ddPTM_A549_MK2206_60min_R1 1 EESAEELQAAEHPDEVEDPK 20 0 O00193 O00193 SMAP Small acidic protein 1 EES(1)AEELQAAEHPDEVEDPK 147.11 1.4383e-21 3493400.0 740.64 1041.9 679.69 1056.9 1176.7 1050.3 722.34 1144.6 1391.3 1187.2 1117.9 True False 865.6419250905162 1094.9282596852856 776.0802624219328 1315.8405474460442 1003.6089887650646 1161.4420488672847 853.5798278795925 1306.850555190487 1076.1727714495573 919.0106954537907 840.2945775295718 1.030164835331277 1.3030290673829235 0.9235811859021795 1.56592769087545 1.1943537606961951 1.3821843909571236 1.015810229775704 1.5552290710152727 1.2807089325905883 1.0936768129048753 1.0 9.71475136414222 -10.632066774859142 1.0042766805746595 1.0059513682674508 1.2541429394909243 0.12890456173606468 0.1987908397712344 0.649978276416508 1.208928025335229 0.1082206154882454 0.03219571038317024 2.333099309495105e-11 10.632066774859142 0.24819157122347346 EES(ph)AEELQAAEHPDEVEDPK ddPTM_A549_PD325901_60min_R1 1 EESAEELQAAEHPDEVEDPK 20 0 O00193 O00193 SMAP Small acidic protein 1 EES(1)AEELQAAEHPDEVEDPK 56.946999999999996 0.001883 4037500.0 842.94 651.83 778.61 766.12 937.65 406.79 678.38 850.72 771.83 728.56 638.66 True False 928.5146482603701 706.7620016975841 831.4511567622835 813.4414924152395 871.7926987168942 403.4772371107945 704.1961221237794 833.7517222230708 739.3926692111254 682.5585972631724 560.1088687993054 1.6577395931094774 1.2618296925250554 1.4844456195536582 1.452291755634933 1.5564700851563722 0.7203550230792112 1.2572486553075854 1.4885529736573684 1.3200874158556841 1.2186177282397976 1.0 9.129563461965509 -14.12021907203723 0.07580500433159118 1.5538704092695365e-13 1.7544301834178615 0.19528394912477587 0.22975319749050377 146.7282933709706 0.9822768844155677 27.868739612389152 4.328778500908178 7.581950207148135e-15 14.12021907203723 1.754430183417706 EES(ph)DGEYDEFGR ddPTM_A549_MK2206_60min_R1 2 EESDGEYDEFGR 12 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGR;EES(1)DGEYDEFGR 283.47 1.4292999999999997e-92 60448000.0 4086.92 4928.0 4633.85 4348.01 10392.0 6168.29 4317.5 5770.12 11176.5 5432.57 5192.23 True False 4776.692180399293 5178.814150810147 5290.999608680246 5413.272645189585 8863.350566199155 6821.01435362048 5101.93386337478 6588.052180251385 8645.040595203036 4205.348663916273 3902.8559927420765 1.2238966001518479 1.3269293462123375 1.3556737985002836 1.3870029166477948 2.2709909314311965 1.7476981898141104 1.3072308773017918 1.6880080106729067 2.215054978016031 1.0775054656735286 1.0 11.930314515978603 -6.544712826115374 24.842818299738557 1.6354389511884637 1.3157582796122345 0.12107194577748293 0.37997563140643514 428.7017500028584 487775.4395415891 0.06812771634621805 0.1418278263040027 2.852904104826093e-07 6.544712826115374 -0.31968067157622926 EES(ph)DGEYDEFGR ddPTM_A549_PD325901_60min_R1 2 EESDGEYDEFGR 12 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGR;EES(1)DGEYDEFGR 150.69 2.9983e-12 76500000.0 628.8 1067.1999999999998 1079.33 1133.56 964.23 758.98 800.8 852.33 852.1600000000001 1217.68 815.8900000000001 True False 692.635313101906 1157.1366893387262 1152.5798243385475 1203.5774266984524 896.5058112129167 752.7991185190173 831.2748822145742 835.3296095100505 816.3466786662259 1140.7954769894313 715.5407023528409 0.9679886983708721 1.6171500594359336 1.6107816376463766 1.6820530582548963 1.2529067993826575 1.0520702959924757 1.161743670878786 1.1674103328620158 1.1408808415536877 1.594312487379499 1.0 9.482890024389055 -6.979951644930514 5.319699729227405 1.0854941592861727 1.4902763169816826 0.17423398815009095 0.2381388515961153 0.10734196647172288 8.89305569552965 0.02584852647803209 0.04854666467810544 1.0472451435747933e-07 6.979951644930514 0.40478215769550996 EES(ph)DGEYDEFGRK ddPTM_A549_MK2206_60min_R1 2 EESDGEYDEFGRK 13 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK 132.44 1.4377e-08 17989700.0 3605.9 3926.6000000000004 3342.2 3462.1000000000004 7938.299999999999 4193.9 3737.3999999999996 4174.3 7903.099999999999 5031.4 5420.799999999999 True False 4214.487764209187 4126.447168135371 3816.1742162847554 4310.314655419576 6770.586585802418 4637.695714314489 4416.437202310807 4766.0198082576035 6113.060468657375 3894.803245540941 4074.6657535309982 1.034314964499118 1.0127081379765936 0.9365612904513111 1.057832695033788 1.6616299336786595 1.13817819542513 1.0838771740930255 1.1696713538104313 1.5002605952058663 0.9558583405683784 1.0 11.992466004005582 -6.542336201942207 24.998192054794465 1.245850924272672 0.9964877413136872 0.19418586494324275 0.1979559775984969 276.13611923373315 354768.1105800392 0.03120611656701585 0.06496709523088902 2.868559074357083e-07 6.542336201942207 -0.24936318295898485 EES(ph)DGEYDEFGRK ddPTM_A549_PD325901_60min_R1 2 EESDGEYDEFGRK 13 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGRK;EES(0.999)DGEY(0.001)DEFGRK 93.42399999999999 7.348e-05 23379000.0 6081.3 6164.0 5845.799999999999 6740.6 7471.0 6384.6 6496.3 5700.299999999999 6958.7 7288.5 7669.0 True False 6698.6690991835585 6683.461912559885 6242.531141651094 7156.951552986685 6946.262733550805 6332.605934407383 6743.520251411758 5586.603044701156 6666.250038531104 6828.302866136808 6725.761617796443 0.9959718288942627 0.9937107932691768 0.9281523039908647 1.0641102018913826 1.0327845570932686 0.9415448084944364 1.0026403899847307 0.830627572336037 0.9911516966185852 1.0152460426294385 1.0 12.715481930770485 -7.251078410997217 24.789395159856973 0.9791340997005795 1.001675681273681 0.07090327315638556 0.05742272520201542 2154.2868067161207 5154298.915318769 0.008523407205515674 0.014649320707808387 5.609466890900942e-08 7.251078410997217 0.022541581573101377 EES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A549_PD325901_60min_R1 1 EESEDELEEANGNNPIDIEVDQNK 24 0 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EES(1)EDELEEANGNNPIDIEVDQNK 105.17 2.6896999999999996e-11 2692200.0 505.93 656.75 660.31 1010.8 642.4 695.84 522.09 780.52 821.32 663.31 1138.5 True False 557.291641154019 712.0966273643257 705.1226073665939 1073.2348203066406 597.2800401596895 690.1733097450168 541.9584206486101 764.9519162939056 786.8027766172362 621.428493398807 998.4717175461267 0.5581446438198923 0.7131865778976647 0.7062018833137547 1.0748775367861734 0.5981942499358744 0.691229703973195 0.542787953954813 0.7661227682781779 0.7880070740019615 0.6223796653209646 1.0 9.963577752612897 -9.953472921154866 0.6786242105723361 0.9913743298017921 0.7102555916108841 0.0 0.17359634693132917 0.5395387074304971 0.502896093818579 0.07250127208543747 0.030336042273399377 1.1130817927852103e-10 9.953472921154866 -0.28111873819090794 EES(ph)EEEEDEDDEEEEEEEKEK ddPTM_A549_MK2206_60min_R1 3 EESEEEEDEDDEEEEEEEKEK 21 1 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;H0Y8X0;D6R9L5 A0A494C198 DEK Protein DEK 1 EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK 387.47 0.0 714659900.0 30090.719999999998 29845.82 31334.94 27014.9 74536.3 35696.88 19049.82 32032.37 45030.7 39700.61 40277.1 True False 35169.29788852841 31364.8447561957 35778.705671961536 33633.55171274494 63572.109007639585 39474.300147928814 22510.925709135874 36573.056542518905 34831.3183492515 30732.214627728867 30275.184478590494 1.1616542886270058 1.035991862522779 1.1817832422214614 1.1109280518680031 2.099809137499904 1.303850028588384 0.7435437998752668 1.2080209310824195 1.150490705478044 1.0150958666977428 1.0 14.885848130403382 -7.565145250003647 24.99473340371508 1.0612812415857462 1.3251436381965116 0.19814934030697096 0.2881320876745346 201.34012964213255 119063.855621565 0.044645926498612154 0.0662206399696388 2.7217908515425153e-08 7.565145250003647 0.2638623966107654 EES(ph)EEEEDEDDEEEEEEEKEK ddPTM_A549_PD325901_60min_R1 2 EESEEEEDEDDEEEEEEEKEK 21 1 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;H0Y8X0;D6R9L5 A0A494C198 DEK Protein DEK 1 EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK 389.12 0.0 782180000.0 11195.400000000001 13378.7 13639.7 12939.7 15191.0 10744.7 13232.599999999999 13706.599999999999 13004.599999999999 13885.7 12660.6 True False 12331.94876638212 14506.170001551733 14565.372064179144 13738.955880809102 14124.036566104985 10657.198725593937 13736.173834156567 13433.211110380316 12458.06188671469 13008.95453225161 11103.426462155901 1.1106435304825428 1.3064588711415788 1.3117907443997294 1.2373618114764793 1.272043059342475 0.9598117087474884 1.2371112539875802 1.2098257376824244 1.122001566739405 1.171616219244606 1.0 13.438717333344343 -9.555972137506133 0.24213486016324598 0.9339003973275165 1.2731395661297675 0.10731886709462135 0.10592011279352063 1.8755334394592453 0.2862987200017473 0.2210621377965478 0.10401608706203427 2.779891608105709e-10 9.555972137506133 0.339239168802251 EES(ph)EEEEDEDDEEEEEEEKEKS(ph)LIVEGK ddPTM_A549_PD325901_60min_R1 2 EESEEEEDEDDEEEEEEEKEKSLIVEGK 28 2 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;H0Y8X0;D6R9L5 A0A494C198 DEK Protein DEK 2 EES(1)EEEEDEDDEEEEEEEKEKS(1)LIVEGK;EES(1)EEEEDEDDEEEEEEEKEKS(1)LIVEGK 174.32 1.2987000000000002e-57 50014000.0 3639.8999999999996 4186.9 3728.7 4237.299999999999 4545.7 3539.1 3987.2 3388.6 4297.799999999999 4669.700000000001 3884.6 True False 4009.4199684472424 4539.744756926827 3981.7520044945827 4499.028397393479 4226.425713813668 3510.278742984867 4138.935077879556 3321.0117146947237 4117.178412002091 4374.854345064015 3406.8188265082863 1.1768808887781608 1.3325465744181348 1.1687595399886752 1.3205951435945948 1.2405783603542584 1.0303684820782264 1.2148973246462975 0.9748131273826768 1.2085111130555382 1.2841464626834551 1.0 11.734209512094024 -7.196008922947794 7.730953740465857 1.0959491170356304 1.2528059015695725 0.2697167692715302 0.1019443747461166 0.2481408241616523 26.572009131465773 0.01387658786187712 0.02407642176568287 6.367824375392483e-08 7.196008922947794 0.15685678453394214 EES(ph)EES(ph)DEDMGFGLFD ddPTM_A549_PD325901_60min_R1 1 EESEESDEDMGFGLFD 16 0 F8VWS0;P05388;P05388-2;Q8NHW5;F8W1K8 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like 2 EES(1)EES(1)DEDMGFGLFD 40.941 0.028044 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EES(ph)EES(ph)EAEPVQR ddPTM_A549_PD325901_60min_R1 1 EESEESEAEPVQR 13 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 EES(1)EES(1)EAEPVQR 68.83 0.0041881999999999996 9081700.0 166.56 254.48 186.13 125.52 0.0 0.0 180.67 229.24 110.3 168.04 212.72 True False 183.46904858500864 275.92592269763765 198.76190109061525 133.27308532339686 0.0 0.0 187.54549571641743 224.66762836469894 105.66447457858229 157.42992572211418 186.5567885431814 0.9834487933551769 1.4790452004043284 1.0654230416525894 0.7143834666329968 0.0 0.0 1.0052997651865516 1.2042854624542179 0.5663930827911129 0.8438713324317042 1.0 7.543471048559217 -6.133104320903647 3.9489064293110894 0.7179014093530519 1.237845977731053 0.2593238031293563 0.3808627614812414 0.2793142958669667 7.49877244100453 0.05837678398412782 0.16673128345248311 7.360302760764873e-07 6.133104320903647 0.5199445683780012 EES(ph)EESEAEPVQR ddPTM_A549_MK2206_60min_R1 2 EESEESEAEPVQR 13 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EES(1)EESEAEPVQR;EES(1)EESEAEPVQR 121.04 9.6051e-06 3592400.0 374.0 617.79 214.39 414.32 683.69 431.72999999999996 468.67999999999995 462.44 725.26 590.13 565.24 True False 437.1220565778963 649.2328722055599 244.7937257582695 515.8284185995316 583.1201066786667 477.41538204081974 553.8330893078154 527.9922861631042 560.9897680022326 456.81922313691484 424.87530816961697 1.0288243354527682 1.5280550780945261 0.5761542764460766 1.2140701252368487 1.3724499764196132 1.1236599841434607 1.3035191235135661 1.2426993897049938 1.320363309458964 1.0751842113511227 1.0 8.730895692954421 -4.9506813886215175 15.82211557801346 1.1702696793306124 0.1760531757036344 0.03069732614211873 0.23539404197618613 6938231.016517658 58038762.99362137 0.030946226867603347 209941914.72338262 1.1202594377910482e-05 4.9506813886215175 -0.994216503626978 EES(ph)EESEAEPVQR ddPTM_A549_PD325901_60min_R1 2 EESEESEAEPVQR 13 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EES(1)EESEAEPVQR;EES(1)EESEAEPVQR 184.21 3.6616e-25 7085400.0 1155.7 1192.07 930.37 1044.73 941.56 794.62 613.14 895.59 705.35 1202.97 1009.12 True False 1273.025813218627 1292.5299224700282 993.5105029692996 1109.2605993460195 875.428073805662 788.1488781754208 636.4733782230822 877.7267548732367 675.7065924206983 1127.0142688998556 885.004637338733 1.438439709250224 1.4604781352974041 1.1226048554466912 1.253395239466359 0.9891790809572837 0.8905590376853122 0.7191751900159523 0.9917764470846374 0.7635062732016775 1.2734557779141829 1.0 9.789541204572693 -6.340800810947461 0.9400550049754848 0.8791310629202073 1.4715253089870102 0.5624837763713392 0.15844520545525562 0.2507858507708159 0.3669010076779813 0.018794622968017958 0.1025367389593011 4.562461251388276e-07 6.340800810947461 0.5923942460668029 EES(ph)LVEELSPASEK ddPTM_A549_PD325901_60min_R1 3 EESLVEELSPASEK 14 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EES(0.997)LVEELS(0.003)PASEK;EES(0.999)LVEELS(0.001)PASEK;EES(1)LVEELSPASEK 205.27 6.9719e-32 12498400.0 7255.1 7938.5 8328.7 7555.799999999999 9250.0 8028.8 7459.4 7474.5 7308.7 9601.4 8129.6 True False 7991.632411077671 8607.505255168167 8893.935666541704 8022.504605533161 8600.31191076763 7963.416114740158 7743.271548940305 7325.415233868186 7001.540755688882 8995.165965414822 7129.710737780402 1.1208915347336517 1.2072727171884994 1.2474469152602023 1.125221611449373 1.2062637920490236 1.1169339693603477 1.086056901005624 1.027449149521697 0.982023116111521 1.2616452891629046 1.0 12.799627830386624 -7.915240750414039 1.2032907624990237 0.990878396620141 1.1855160122569843 0.0741900980288025 0.0890487477189062 0.10747430085296984 0.3129887554256084 0.006015827365723266 0.009174886269371626 1.2155119968204953e-08 7.915240750414039 0.19463761563684334 EES(ph)PLR ddPTM_A549_MK2206_60min_R1 2 EESPLR 6 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EES(1)PLR;EES(1)PLR 92.47 0.036699 566990000.0 1267.8000000000002 1207.5500000000002 963.65 874.22 2191.12 1537.33 1210.57 1860.4099999999999 2076.8999999999996 1159.08 1384.4699999999998 True False 1481.7736452659276 1269.0091371369308 1100.3100602964528 1088.4039392452266 1868.8091505591115 1700.0092402029366 1430.5148991281092 2124.1288147666733 1606.4854661277843 897.2430229839795 1040.6678895718446 1.4238679410734623 1.2194179813302697 1.0573114355907978 1.0458705896008973 1.7957786237912883 1.633575184973143 1.3746123172078046 2.041120741834929 1.5437061931340366 0.8621799826581816 1.0 10.023294016591345 -3.803372851914557 16.19580002240751 1.3489568055986696 1.2619401482599555 0.0 0.3511496174061849 0.0 0.0 0.04723394113114389 0.0 0.00015726321434613417 3.803372851914557 -0.08701665733871411 EES(ph)PLR ddPTM_A549_PD325901_60min_R1 2 EESPLR 6 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EES(1)PLR;EES(1)PLR 113.41 0.02105 468710000.0 2459.31 2409.94 1933.1 2075.56 2597.4700000000003 1567.6999999999998 1928.7 2106.26 1972.02 1787.25 2432.75 True False 2708.977340751665 2613.0341014851642 2064.2917906746266 2203.7626272612306 2415.0326679850373 1554.9331709692785 2002.0977339251376 2064.2489919709956 1889.1428572842776 1674.402729986006 2133.537172472849 1.269711808026227 1.2247427113990992 0.9675443284084128 1.0329150369135531 1.1319384068597804 0.7288052868406568 0.9383936496426879 0.9675242684328084 0.885451109855607 0.7848012922340186 1.0 11.059031531397526 -5.416742773329919 0.816863526026221 0.9393593178281568 1.448417174526531 0.5623182525778074 0.10558938526530243 1.051597944785538 0.5810978364546895 0.014881866859308755 0.4581991747551425 3.830515523273813e-06 5.416742773329919 0.5090578566983742 EES(ph)PLRIK ddPTM_A549_MK2206_60min_R1 2 EESPLRIK 8 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EES(1)PLRIK;EES(1)PLRIK 60.518 0.0031414000000000004 65791000.0 1948.86 2689.7 2699.4 2193.81 3770.3 1816.26 2039.1799999999998 1134.8899999999999 4456.700000000001 3853.2 3904.9 True False 2277.77992294759 2826.594241362429 3082.215510573594 2731.2935484838736 3215.6938644862093 2008.4554276641861 2409.67261042654 1295.7641329548599 3447.2645658874762 2982.759443836376 2935.205560242618 0.7760205805685764 0.9629970315022122 1.0500850612721055 0.9305288820242322 1.09556002075044 0.6842639762164294 0.820955316747002 0.4414560092505939 1.1744542230979327 1.0162012106538212 1.0 11.519245827301646 EES(ph)PLRIK ddPTM_A549_PD325901_60min_R1 2 EESPLRIK 8 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EES(1)PLRIK;EES(1)PLRIK 101.38 0.00064136 110584000.0 5446.8 5417.7 6669.1 6803.2 6227.4 9880.2 8294.3 7590.6 7232.9 7803.7 7205.9 True False 5999.7551262777715 5874.268592419801 7121.705230556177 7223.418212811769 5790.008907363712 9799.738926969876 8609.944125315113 7439.199528289493 6928.926366087286 7310.973050212227 6319.619981963666 0.9493854287759714 0.9295287705882779 1.1269198544978465 1.1430146485750035 0.9161957402325653 1.550684844173945 1.3624148524575974 1.177159314883036 1.0964150353759552 1.1568690951477945 1.0 12.625622092016979 -5.76041152609241 24.9472768649948 1.1119018012877517 0.9394570400256395 0.15272729356597758 0.1689597498223779 42.12420392568245 1022245.029379197 0.025215890557917967 0.08777847499495026 1.7361549140709159e-06 5.76041152609241 -0.17244476126211228 EES(ph)SEDENEVSNILR ddPTM_A549_PD325901_60min_R1 1 EESSEDENEVSNILR 15 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 EES(0.558)S(0.442)EDENEVSNILR 198.16 1.7294999999999998e-38 3039000.0 872.85 956.61 1060.5 869.52 1264.7 941.66 969.51 1005.7 921.61 756.59 690.37 True False 961.4610894417915 1037.2268819230874 1132.4719073045585 923.2282755768008 1175.8718349781439 933.9914331663778 1006.4052335862292 985.6405245436124 882.8779366851056 708.8187782795432 605.4588666160033 1.587987462823917 1.7131252659991547 1.8704357467487542 1.524840623338884 1.9421167973809033 1.5426174834742947 1.6622190029376773 1.6279231817224826 1.4581963951071315 1.1707133504233462 1.0 9.241885139876215 -9.827659064596904 0.4520369175406434 0.9524054489168393 1.7327039525395584 0.7610639130864283 0.1283491499357622 0.2984500042787017 0.1242862675572293 0.0979089420928411 0.0357578383344049 1.4871026084638978e-10 9.827659064596904 0.7802985036227191 EES(ph)WESGR ddPTM_A549_MK2206_60min_R1 1 EESWESGR 8 0 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 EES(1)WESGR 109.29 0.0016839000000000003 10292000.0 289.6 262.07 209.8 207.1 505.88 372.88 377.02 300.41 667.81 391.09 336.91 True False 338.4773999597829 275.40824360852565 239.55279473895683 257.8395092970724 431.4657221351836 412.33791410228827 445.51965377407294 342.99403746704036 516.5521012734346 302.7424973761987 253.24594875703363 1.3365560302981234 1.087512929467451 0.9459294251881039 1.0181387325743398 1.7037418535336002 1.6282112946963225 1.7592370419378687 1.3543910145473317 2.039725033347006 1.195448530814021 1.0 7.984395379808497 -6.753347332950783 24.777234063457822 1.5344929558895108 1.0855608939599437 0.35102148561481017 0.2801482599985402 188.39601546508516 576848.7215237747 0.054709339130464205 0.11231745535221241 1.76462597243662e-07 6.753347332950783 -0.44893206192956714 EES(ph)WESGR ddPTM_A549_PD325901_60min_R1 2 EESWESGR 8 0 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 EES(1)WESGR;EES(1)WESGR 105.4 0.0019873 21654000.0 974.04 754.36 874.1600000000001 949.1600000000001 553.18 631.03 591.11 527.74 971.51 961.5899999999999 994.49 True False 1072.9238237496506 817.9325646266506 933.4857543511108 1007.7874575012382 514.3265451673991 625.8911008973294 613.6050145178037 517.2138116959787 930.6808132170305 900.8750432940238 872.1740345915218 1.2301717102277059 0.9378088915588103 1.0702975751717994 1.1554889477685841 0.5897063255366015 0.7176218003216092 0.7035350631656702 0.5930167503074236 1.0670815414184052 1.0329074331087418 1.0 9.768472230499619 -2.131313193950065 0.9564790927653624 0.9361382229953906 157.55852398475704 0.1608739532735638 0.19900095493770048 1663.5364630611816 3.5385592183960926 0.03369665753058779 569326.2019535189 0.0073907209675851526 2.131313193950065 156.62238576176165 EES(ph)WGPPR ddPTM_A549_MK2206_60min_R1 1 EESWGPPR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 EES(1)WGPPR 76.827 0.004580699999999999 1997300.0 1125.5 1328.1 991.98 942.22 1416.1 1308.4 1453.8 1730.6 2041.1 1604.5 1836.3 True False 1315.456884166904 1395.6946172262485 1132.6576802914697 1173.0639422978632 1207.793565896326 1446.854019554372 1717.9366417079923 1975.9178497402227 1578.7941089669325 1242.0423356263532 1380.2960306982304 0.9530251880109174 1.011156002904847 0.8205904060439183 0.8498640264179143 0.8750250229187119 1.048220082776354 1.244614635919053 1.4315174468339908 1.143808338105769 0.8998376493179214 1.0 10.430761998201103 -7.39902669203659 4.36934871361593 1.1157810732801376 0.9013796397037486 0.41279349279189526 0.1356602103086646 0.20927729592864902 6.528228938938296 0.021567887114779923 0.03487271886275016 3.99000378771716e-08 7.39902669203659 -0.21440143357638908 EESEES(ph)DDDMGFGLFD ddPTM_A549_PD325901_60min_R1 2 EESEESDDDMGFGLFD 16 0 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 EES(0.005)EES(0.995)DDDMGFGLFD;EES(0.057)EES(0.943)DDDMGFGLFD 83.04700000000001 6.2139e-05 5579800.0 143.73 0.0 290.81 172.3 141.44 0.0 216.18 0.0 149.27 0.0 0.0 True False 158.32136379156637 0.0 310.5461153825916 182.94257967830853 131.50574234151065 0.0 224.40684819823508 0.0 142.99670100040774 0.0 0.0 0.0 EESEES(ph)DEDMGFGLFD ddPTM_A549_PD325901_60min_R1 1 EESEESDEDMGFGLFD 16 0 F8VWS0;P05388;P05388-2;Q8NHW5;F8W1K8 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like 1 EESEES(1)DEDMGFGLFD 182.08 2.0127000000000003e-34 16973000.0 562.31 515.21 622.64 359.57 656.91 547.41 315.46 508.09 733.31 631.58 176.7 True False 619.3952972492568 558.6285548296521 664.8960946384819 381.77982225728033 610.7709078164717 542.9520744532068 327.4650029263357 497.95574636110604 702.4915308542169 591.7019310138828 154.96702019358855 3.9969491345674273 3.6048222010838162 4.290565139652796 2.463619819109587 3.941296070954206 3.5036620938760903 2.1131270545001026 3.2133014220641765 4.533167960361163 3.8182442320612116 1.0 7.275817406140529 -10.935616284837891 1.1444819380202518 0.9731110278426047 3.5661536671093508 0.0 1.0684128419014827 0.26084616847913306 0.5966841334569976 0.544603898779275 0.12243489871298892 1.1598016310321115e-11 10.935616284837891 2.593042639266746 EESEES(ph)EAEPVQR ddPTM_A549_PD325901_60min_R1 1 EESEESEAEPVQR 13 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EES(0.172)EES(0.828)EAEPVQR 62.088 0.0072293999999999995 2643200.0 250.07 174.59 228.53 150.77 308.37 158.44 209.13 200.6 184.02 236.19 208.72 True False 275.4569223081959 189.30331202365826 244.03942006252785 160.08272047648614 286.7111550187475 157.14971717061462 217.0885565903271 196.5988756323443 176.28627934678792 221.27692309156248 183.04876318509227 1.5048280988911344 1.0341687577109802 1.3331934934505076 0.8745359307050674 1.5663102554199482 0.8585128598312928 1.1859602480395621 1.0740246053099558 0.9630563806024389 1.2088413996428662 1.0 7.516084215519002 -2.000000026491632 0.213559428750229 0.9611042334248711 2.9837235127905255 0.12447964371866616 0.21389558573195297 44.70962775097186 0.5124807850836393 0.12129820205989912 31.304675235008006 0.009999999390007648 2.000000026491632 2.0226192793656543 EESHSNDQS(ph)PQIR ddPTM_A549_MK2206_60min_R1 4 EESHSNDQSPQIR 13 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 EESHSNDQS(1)PQIR;EES(0.001)HS(0.002)NDQS(0.997)PQIR;EESHSNDQS(1)PQIR;EES(0.003)HS(0.017)NDQS(0.98)PQIR 124.16 1.444e-06 31012520.0 844.67 930.39 619.8399999999999 731.73 962.67 925.6700000000001 556.25 758.61 1185.59 1099.02 969.76 True False 987.2296458012067 977.7428769830057 707.742632464228 911.0038828486075 821.0625182412374 1023.6237849899844 657.313424783375 866.1452906456888 917.0557579981893 850.7506186974601 728.9418279855781 1.354332551514301 1.3413181127017861 0.9709178500842326 1.249762118008999 1.1263759146737864 1.4042599089405479 0.9017364617418823 1.1882227873234696 1.258064392507783 1.167103582254978 1.0 9.509659876994476 -10.901518828010577 1.010704956516873 0.9931861223634134 1.1982475961138488 0.037789961625270596 0.154898604189852 0.75064690192046 1.2847838997149545 0.11618302143008385 0.024185798179237567 1.2545303489037816e-11 10.901518828010577 0.20506147375043537 EESHSNDQS(ph)PQIR ddPTM_A549_PD325901_60min_R1 4 EESHSNDQSPQIR 13 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 EESHS(0.001)NDQS(0.999)PQIR;EESHS(0.004)NDQS(0.996)PQIR;EESHS(0.002)NDQS(0.998)PQIR;EES(0.001)HS(0.006)NDQS(0.994)PQIR 141.34 8.2825e-13 34843900.0 1684.1999999999998 1729.87 1947.79 1439.42 1648.13 1773.0099999999998 1418.12 1777.45 1786.8799999999999 1774.5399999999997 1710.5599999999997 True False 1855.1787441574895 1875.6522158792934 2079.9787424127717 1528.3297042399938 1532.3710345398329 1758.571194399591 1472.08733262504 1741.9973653674501 1711.7836476425846 1662.4952415551081 1500.1719641332475 1.2366440571560433 1.2502914737264716 1.3864935435015402 1.018769674930577 1.0214635862930481 1.172246406708206 0.9812790585481753 1.1611984539211955 1.1410582843624861 1.1082031135781463 1.0 10.550912170438156 -2.000000000428644 0.22763464200267636 1.0417304945210022 2.4650032439030367 0.33014479631161453 0.09807441205441776 37.41864234231603 0.4403892576425186 0.05829262378715101 20.0723672913497 0.009999999990130112 2.000000000428644 1.4232727493820345 EESKKEET(ph)PGTPK ddPTM_A549_PD325901_60min_R1 1 EESKKEETPGTPK 13 2 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EESKKEET(0.5)PGT(0.5)PK 105.9 3.4008000000000004e-05 359790000.0 22761.0 23023.0 26559.0 21883.0 27439.0 19603.0 22561.0 22374.0 23319.0 23775.0 22722.0 True False 25071.679964237403 24963.22900922553 28361.453452241163 23234.663210101124 25511.779299411155 19443.35966735394 23419.571200852897 21927.733017936538 22338.983524006875 22273.84244253313 19927.338046625464 1.2581549982027376 1.2527126779711983 1.423243455090779 1.1659692406350144 1.280240202666275 0.9757128434244893 1.175248352090801 1.100384455095337 1.1210219584642318 1.1177530280470667 1.0 14.28246138308185 -6.324300970148613 0.20844497693688638 0.9900132566004032 1.4853055782336197 0.4566513232389453 0.09097736761913597 4.254418431184767 0.24204016965256311 0.09571121607563 0.5578382719562477 4.7391344497109166e-07 6.324300970148613 0.49529232163321657 EESKKEETPGT(ph)PK ddPTM_A549_MK2206_60min_R1 4 EESKKEETPGTPK 13 2 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EESKKEETPGT(1)PK;EESKKEET(0.039)PGT(0.961)PK;EESKKEET(0.019)PGT(0.981)PK;EESKKEET(0.03)PGT(0.97)PK 109.35 5.4986000000000005e-05 397652000.0 22197.5 21260.7 19382.1 16021.900000000001 25382.9 20528.9 21091.4 24279.9 25629.9 24427.5 23304.5 True False 25943.895323229528 22342.77881820804 22130.773226453468 19947.26621925043 21649.1090345243 22701.25457201907 24923.43436849632 27721.650179075245 19824.768572540095 18909.310784364454 17517.34947852035 1.4810400029434674 1.2754657230310211 1.2633631162973635 1.138714863439222 1.2358667080924703 1.2959297637953267 1.4227857016301044 1.5825253822256236 1.1317219306978539 1.0794618676501782 1.0 14.096496879176124 -8.96625684555463 12.210203725238065 1.0580313928250922 1.3260799495652422 0.5087187437573795 0.11817011835884636 0.5122729566361653 184.3022324330811 0.022475801931686672 0.023620570426190524 1.0807945708879021e-09 8.96625684555463 0.26804855674015005 EESKKEETPGT(ph)PK ddPTM_A549_PD325901_60min_R1 3 EESKKEETPGTPK 13 2 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EESKKEET(0.004)PGT(0.996)PK;EESKKEET(0.015)PGT(0.985)PK;EESKKEET(0.017)PGT(0.983)PK 97.579 6.3563e-05 347539000.0 19715.6 20466.100000000002 21249.3 17121.8 25016.5 17121.100000000002 19567.300000000003 19082.1 19337.0 19894.5 20773.899999999998 True False 21717.113198142393 22190.850072784204 22691.40528042127 18179.374699570875 23259.427342239826 16981.671438082605 20311.944309137412 18701.49254588213 18524.333136228888 18638.35787478338 18218.84199660208 1.1920139162627768 1.2180164950617018 1.245491084705238 0.9978337099010702 1.2766688105960764 0.9320938971450428 1.1148866823108574 1.026491834627583 1.0167678681051069 1.0230264842441437 1.0 14.153143642813884 -6.785554807670954 0.5397972211761601 1.0046541791674632 1.2440942371944872 0.436393987279867 0.08517402094460294 0.7376312458897388 0.33725466616492916 0.016204927476817715 0.08351120292839963 1.6384952712374427e-07 6.785554807670954 0.23944005802702395 EESLVEELS(ph)PASEK ddPTM_A549_MK2206_60min_R1 3 EESLVEELSPASEK 14 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EESLVEELS(1)PASEK;EESLVEELS(0.998)PAS(0.002)EK;EESLVEELS(1)PASEK 240.73 1.6803e-57 15173500.0 5744.4 6381.2 5168.299999999999 5169.4 7667.0 6637.6 5846.2 5704.3 8679.900000000001 7221.299999999999 7330.4 True False 6713.9142829039165 6705.97582369109 5901.242655144663 6435.903232063185 6539.194456413489 7339.986426317715 6908.378865561466 6512.901993686089 6713.916508952076 5590.003314589337 5510.059371252146 1.2184831107143221 1.2170423895391123 1.0709943863642293 1.1680279282726937 1.1867738650023794 1.3321065948241722 1.2537757581351716 1.1820021445986797 1.2184835147114497 1.0145087263041639 1.0 12.427852148676228 -10.649166980866614 0.8041923514023468 0.9927953016657435 1.2054187617213936 0.6155204504752851 0.06015075306610807 0.39228919358426245 0.42807007619669263 0.05199234799887006 0.012203650860729633 2.2430193447215355e-11 10.649166980866614 0.21262346005565014 EESLVEELS(ph)PASEK ddPTM_A549_PD325901_60min_R1 2 EESLVEELSPASEK 14 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EESLVEELS(1)PASEK;EESLVEELS(0.741)PAS(0.259)EK 227.47 4.2134999999999995e-47 22381000.0 6606.6 7582.6 6199.2 7117.1 8130.2 7324.9 6830.0 7254.0 7378.4 7613.3 8128.0 True False 7277.297168478138 8221.612313137019 6619.914990817933 7556.707102893151 7559.162799667353 7265.248442962858 7089.9193875194105 7109.313279347088 7068.311507077162 7132.59493870609 7128.307527637168 1.0209011241817672 1.1533750867595145 0.9286797693774931 1.060098357652926 1.0604428569277793 1.0192108596317928 0.9946146907987733 0.9973353775469931 0.991583412987249 1.000601462696762 1.0 12.79934386324844 -7.533948550271044 3.6286246091409073 0.9960310019174863 1.0450463492981534 0.1775182973824988 0.048999642229595505 0.2882553737909072 8.213074721272026 0.006931112690866181 0.010823700725433216 2.9244988150314835e-08 7.533948550271044 0.04901534738066715 EESLVEELS(ph)PASEKKPVPPSEGK ddPTM_A549_MK2206_60min_R1 1 EESLVEELSPASEKKPVPPSEGK 23 2 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EES(0.003)LVEELS(0.991)PAS(0.005)EKKPVPPSEGK 86.48 8.764600000000001e-07 7233700.0 1909.6 2282.0 2086.0 1326.2 2600.0 1711.3 1823.6 1577.5 3158.2 2998.8 3069.6 True False 2231.8937947624327 2398.144052789924 2381.8261669469207 1651.1190595353794 2217.5434441991724 1892.3886301309967 2154.9245149392596 1801.115455891136 2442.8727426090677 2321.368997242947 2307.3336033498294 0.9673043341119498 1.039357312400883 1.032285129245698 0.7155961570265584 0.9610848821252818 0.8201625579342285 0.9339457943189058 0.7806047002809838 1.0587427579013542 1.0060829495451982 1.0 11.172010894276177 -8.800794584230271 24.98593164892819 1.0277396669593797 0.9084482800403919 0.21907476507985413 0.09671306047717673 161.74318214965234 102687.20272058695 0.016701285042904933 0.017780003366560805 1.5819961263980044e-09 8.800794584230271 -0.11929138691898777 EESLVEELS(ph)PASEKKPVPPSEGK ddPTM_A549_PD325901_60min_R1 1 EESLVEELSPASEKKPVPPSEGK 23 2 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EES(0.003)LVEELS(0.98)PAS(0.017)EKKPVPPSEGK 68.76 8.7514e-05 11614000.0 2381.6 2281.4 2309.6 1937.2 2751.0 3122.1 2829.8 2633.2 2822.1 3267.4 3028.6 True False 2623.3782787587465 2473.661584573996 2466.3433447530474 2056.8564442995876 2557.7792504347835 3096.6746527289556 2937.489587525976 2580.6787602945624 2703.4969511171084 3061.0958063820267 2656.1013998772073 0.9876800181198001 0.9313129328151232 0.9285576766260006 0.7743892776061475 0.9629825316733129 1.1658721511430685 1.105940303205961 0.9716040059366213 1.0178440293138253 1.1524770125581585 1.0 11.37509450902297 -7.000898307374894 24.999685213758664 1.0251568194393588 0.9039413801404401 0.4316735245656875 0.08047728330505105 27.84719659382016 775031.9538335952 0.010519621373495117 0.01971036573429185 9.97933708555094e-08 7.000898307374894 -0.12121543929891865 EESREPAPAS(ph)PAPAGVEIR ddPTM_A549_MK2206_60min_R1 4 EESREPAPASPAPAGVEIR 19 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 EESREPAPAS(1)PAPAGVEIR;EESREPAPAS(1)PAPAGVEIR;EESREPAPAS(1)PAPAGVEIR;EES(0.014)REPAPAS(0.986)PAPAGVEIR 149.18 1.6817000000000002e-21 344097200.0 2431.96 3288.53 2608.51 3001.4500000000003 3915.58 2700.95 2433.12 2328.92 4492.83 3567.78 3606.61 True False 2842.4153922865785 3455.902130552697 2978.435941870909 3736.8053847402107 3339.6033689374594 2986.7627362544913 2875.186409184584 2659.051542018373 3475.2111785752313 2761.816020069176 2710.9891996278106 1.0484790543159712 1.2747753222429492 1.098652824688426 1.3783918376558761 1.2318763089856466 1.1017243213896024 1.0605672680582114 0.980841805781975 1.281897832367735 1.018748440771488 1.0 11.404603650263224 -7.2629927345437295 24.35968297589869 1.115520212625195 1.2137970024254356 0.20602705976133695 0.11420257861967885 172.94403723901013 2712117.501640936 0.019505787480264367 0.032202124760331866 5.457669913317111e-08 7.2629927345437295 0.09827678980024057 EESREPAPAS(ph)PAPAGVEIR ddPTM_A549_PD325901_60min_R1 4 EESREPAPASPAPAGVEIR 19 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 EESREPAPAS(1)PAPAGVEIR;EES(0.003)REPAPAS(0.997)PAPAGVEIR;EES(0.001)REPAPAS(0.999)PAPAGVEIR;EESREPAPAS(1)PAPAGVEIR 147.39 2.3079999999999997e-21 377814000.0 2661.31 3439.1600000000003 2884.81 4455.14 2534.02 2779.27 3020.43 3277.74 4499.780000000001 4006.13 3638.0 True False 2931.484232047125 3728.9900829330713 3080.590554371771 4730.323879442945 2356.039177094422 2756.6365465840317 3135.374116492714 3212.3629043627116 4310.669895006463 3753.182268109579 3190.549063182088 0.9188024299251536 1.1687612411181574 0.965536179938681 1.4826049641515826 0.7384431740236681 0.8640006757441008 0.9827067549826847 1.0068370179391215 1.351074629990872 1.1763436931342313 1.0 11.63958900412776 EESS(ph)EDENEVSNILR ddPTM_A549_MK2206_60min_R1 2 EESSEDENEVSNILR 15 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 EES(0.019)S(0.981)EDENEVSNILR;EES(0.161)S(0.839)EDENEVSNILR 119.32 6.8388e-07 3431400.0 927.88 1091.71 1031.88 1129.85 1215.03 1314.27 689.8299999999999 1174.1599999999999 1587.61 1459.21 1234.6599999999999 True False 1084.4834595120274 1147.273375929575 1178.2161002632733 1406.6633007208939 1036.300696540508 1453.3451790581805 815.1631816958483 1340.6007757141913 1228.0188698922111 1129.5734475346408 928.0598471175065 1.1685490573483623 1.2362062419712818 1.2695475447221813 1.5157032222543607 1.1166313247569006 1.5660037265615747 0.8783519556714926 1.4445197471671791 1.3232108615692812 1.2171342732292776 1.0 9.858074032148767 -10.74136298294756 0.8833492076877371 0.9911220055072455 1.2834634295720653 0.06406317521114835 0.19356072700592222 0.6764347028035151 0.892510303670435 0.13241023925097106 0.030232974318863112 1.813998890319307e-11 10.74136298294756 0.2923414240648198 EESS(ph)EDENEVSNILR ddPTM_A549_PD325901_60min_R1 1 EESSEDENEVSNILR 15 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 EES(0.013)S(0.987)EDENEVSNILR 167.55 4.2981e-27 2964500.0 655.95 742.13 814.33 689.85 534.11 843.02 746.78 593.58 695.41 750.87 781.72 True False 722.5415611151323 804.6718996054616 869.5953307640939 732.460467736977 496.5959561794702 836.1547246223902 775.1991215536957 581.7405812454982 666.1843360534166 703.4599400557245 685.5733957313639 1.0539229871140654 1.1737210116606762 1.2684204728166515 1.0683910319413639 0.7243512646077899 1.2196429001309004 1.1307310440871468 0.8485460271177855 0.9717184771190498 1.0260899043570373 1.0 9.421167315282403 -6.5197985769649085 24.972866079397026 0.9861557183150155 1.1665605167379867 0.26016316526170125 0.13073396362292752 114.9608457013435 932056.7740845733 0.017607528440498066 0.03723096194811931 3.021352679770702e-07 6.5197985769649085 0.1804047984229712 EESYS(ph)PSKDR ddPTM_A549_MK2206_60min_R1 2 EESYSPSKDR 10 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 EESYS(0.984)PS(0.016)KDR;EESYS(0.917)PS(0.083)KDR 161.94 6.2338000000000005e-09 43700000.0 5253.3 5378.1 4855.700000000001 4773.7 7130.6 5085.0 5102.0 5307.3 7250.1 7163.2 6816.3 True False 6139.9286091461545 5651.8223182776055 5544.311274613694 5943.2567142995385 6081.698185848702 5623.091324850179 6028.967358642304 6059.626027924582 5607.963926030646 5545.02814494154 5123.624589690332 1.198356456774919 1.1030906381490369 1.0821072421601419 1.1599711513326827 1.1869913728820394 1.097483085736778 1.1766996689752967 1.1826834542323135 1.0945306057970938 1.0822471568465708 1.0 12.32294905729065 -9.733685950340377 0.8028662012236739 1.0107612268208577 1.1451139532381174 0.4167850778970843 0.04482371771773497 0.252417935360411 0.3420642762051468 0.015462924167494967 0.008669019600480566 1.8463500804248799e-10 9.733685950340377 0.1343527264172597 EESYS(ph)PSKDR ddPTM_A549_PD325901_60min_R1 1 EESYSPSKDR 10 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 EESYS(0.5)PS(0.5)KDR 110.74 0.00014861 29948000.0 6465.3 7044.7 6344.1 7548.0 8185.4 8116.7 7208.1 8248.0 8108.3 9588.0 8942.3 True False 7121.652496497693 7638.3815923768 6774.648776172414 8014.222817248248 7610.485742097012 8050.600286283303 7482.408189923665 8083.487169569177 7767.536348372785 8982.612043701682 7842.453789910171 0.9080898258731425 0.9739785272568743 0.8638429957838505 1.0219024596050625 0.9704214963801763 1.0265409911169545 0.9540901853384552 1.0307344341600218 0.9904471937553816 1.145382846279362 1.0 12.937089407964137 -6.277255000741326 24.996335747051194 0.9968018807553364 0.9211712525969152 0.3645140721181993 0.05523442902000398 390.9412237811384 617875.7422570861 0.003892915745890206 0.009073788481898368 5.281350604575648e-07 6.277255000741326 -0.07563062815842114 EET(ph)PGQRPAVTETHQLAELNEK ddPTM_A549_MK2206_60min_R1 2 EETPGQRPAVTETHQLAELNEK 22 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1;I3L1C0 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EET(0.723)PGQRPAVT(0.123)ET(0.155)HQLAELNEK;EET(0.989)PGQRPAVT(0.008)ET(0.003)HQLAELNEK 106.51 2.7292e-10 7969000.0 1686.46 1565.72 1398.6599999999999 1099.57 1665.7 1542.05 1443.06 1842.06 1809.19 1977.44 2171.42 True False 1971.0932180116545 1645.408460269167 1597.0110194927993 1368.9646993615734 1420.6777365394473 1705.2287074700535 1705.245322728805 2103.177646072156 1399.411353682762 1530.734930608276 1632.1964858567517 1.2076323133222613 1.0080945980014657 0.9784428733495997 0.838725429949075 0.8704085254746295 1.044744748715083 1.044754928407844 1.288556656197053 0.8573792222988403 0.9378374134930099 1.0 10.672599025861366 EETGDEEDGS(ph)PIALHR ddPTM_A549_MK2206_60min_R1 2 EETGDEEDGSPIALHR 16 0 P79522-2 P79522-2 PRR3 Proline-rich protein 3 1 EETGDEEDGS(1)PIALHR;EET(0.001)GDEEDGS(0.999)PIALHR 89.26100000000001 3.5738e-06 11473600.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EETGDEEDGS(ph)PIALHR ddPTM_A549_PD325901_60min_R1 2 EETGDEEDGSPIALHR 16 0 P79522-2 P79522-2 PRR3 Proline-rich protein 3 1 EETGDEEDGS(1)PIALHR;EETGDEEDGS(1)PIALHR 98.035 1.0395e-06 11156700.0 123.56 0.0 0.0 0.0 0.0 0.0 0.0 104.02 0.0 103.46 0.0 True False 136.10372023993554 0.0 0.0 0.0 0.0 0.0 0.0 101.94523949788862 0.0 96.92751794340593 0.0 0.0 EETLT(ph)PEEEEK ddPTM_A549_MK2206_60min_R1 1 EETLTPEEEEK 11 0 K7EKA0;K7ERZ8;K7EKC1;P53539-7;P53539-10;P53539-4;P53539-3;P53539 K7EKA0 FOSB Protein fosB 1 EET(0.003)LT(0.997)PEEEEK 54.7 0.019537 1104100.0 684.88 797.67 647.79 687.99 961.56 677.74 469.25 957.76 777.72 899.78 1212.7 True False 800.4710002916294 838.2679958759591 739.6563627452282 856.5475808850446 820.1157977708297 749.457996952598 554.5066509296157 1093.5254130169853 601.5676617636384 696.5190730756506 911.5531211826745 0.8781397174671245 0.9196041090708643 0.8114243103962798 0.9396573397431142 0.8996906254972705 0.822176985122085 0.6083097496393663 1.199628839620685 0.6599370325046419 0.7641014625367826 1.0 9.832182922214361 -7.249582851278392 22.583582829346526 0.8453573308664399 0.8897907862817418 0.023043384588032123 0.1528175721572851 1041.0572810168835 1982930.691324974 0.024582199758303475 0.04230001353198858 5.628817250116532e-08 7.249582851278392 0.04443345541530186 EETLT(ph)PEEEEK ddPTM_A549_PD325901_60min_R1 1 EETLTPEEEEK 11 0 K7EKA0;K7ERZ8;K7EKC1;P53539-7;P53539-10;P53539-4;P53539-3;P53539 K7EKA0 FOSB Protein fosB 1 EET(0.001)LT(0.999)PEEEEK 78.908 0.0010711 1067900.0 1175.2 1219.4 1020.0 922.5 1070.1 1180.3 945.9 1056.8 1137.5 1071.0 1025.3 True False 1294.505438863485 1322.1631174846725 1089.2233337582745 979.4807298504903 994.939867644588 1170.6880281272176 981.8967421163405 1035.7212949564378 1089.694830762805 1003.3768772219971 899.1945999122036 1.4396276834734987 1.4703859627423999 1.2113321564260118 1.0892867127384058 1.1064789176244307 1.301929558119591 1.0919735752552473 1.1518322007912019 1.2118565112259367 1.1158617693210855 1.0 9.812489561295221 -2.0000000000000004 0.344578567089552 1.0940240978811753 5.609273462970186 0.6170865096965892 0.0881562038137968 27.616681530729036 0.34073510741643953 0.027518887869891647 81.85428149757207 0.00999999999999999 2.0000000000000004 4.51524936508901 EETNGPSNQKPVKS(ph)PDNSIK ddPTM_A549_MK2206_60min_R1 2 EETNGPSNQKPVKSPDNSIK 20 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EET(0.007)NGPS(0.004)NQKPVKS(0.988)PDNS(0.001)IK;EET(0.021)NGPS(0.076)NQKPVKS(0.902)PDNS(0.001)IK 66.3 0.00031508 15237800.0 3379.2 3370.2 3544.1000000000004 3140.8999999999996 4638.3 4325.4 3754.7 3497.8 5381.6 5353.1 4957.8 True False 3949.5263464920486 3541.72878471192 4046.7066722323 3910.42064100036 3956.0122143188546 4783.11095703185 4436.880388375977 3993.6238615632415 4162.676192649278 4143.830992110588 3726.6414316809296 1.0598085216668096 0.9503808857495573 1.0858857087323808 1.0493149697089412 1.0615489273231382 1.283491058831059 1.1905841948348352 1.0716415664819912 1.1170047531972165 1.1119478672895777 1.0 11.863660297820118 -3.5509801869707602 11.553052504072731 1.0743661819004673 0.29042520821825935 0.0 0.08661138280162071 0.0 0.0 0.012265960159655507 0.0 0.00028120291155753424 3.5509801869707602 -0.7839409736822079 EETPGT(ph)PK ddPTM_A549_MK2206_60min_R1 3 EETPGTPK 8 0 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EET(0.003)PGT(0.997)PK;EETPGT(1)PK;EET(0.111)PGT(0.889)PK 119.53 0.0012932 143014000.0 21855.1 23211.4 19938.1 18297.9 25598.8 22507.5 19471.0 22175.1 28132.8 24326.1 25906.9 True False 25543.70657410581 24392.761116094687 22765.6223869628 22780.886321423943 21833.25043052532 24889.228710730666 23008.62866329367 25318.488333395573 21760.765718850078 18830.81711478981 19473.501735934216 1.3117161422986559 1.252612983882761 1.1690564283543146 1.1698402593605777 1.121177419787664 1.2781075046612123 1.1815352459612403 1.3001507729180353 1.1174551970124202 0.9669969669626255 1.0 14.249224713161766 -9.430348119906062 0.974620377945454 1.0228815270424105 1.2174911104488673 0.6519432012217701 0.06436317684362806 0.21707214651264475 0.4348245147511657 0.017900518186792135 0.013297537243980962 3.712375348116966e-10 9.430348119906062 0.19460958340645673 EETPGT(ph)PK ddPTM_A549_PD325901_60min_R1 2 EETPGTPK 8 0 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EET(0.055)PGT(0.945)PK;EET(0.03)PGT(0.97)PK 105.98 0.0020581999999999996 81498000.0 11295.400000000001 12653.900000000001 11573.8 11132.599999999999 13360.4 11314.5 11362.9 11786.8 11130.8 12758.9 11986.7 True False 12442.100692766006 13720.288561865911 12359.267666913243 11820.235418030974 12422.011594877826 11222.358463310526 11795.321377517468 11551.703027434272 10663.011184399666 11953.3008765525 10512.411889951829 1.1835628990772944 1.305151349233214 1.1756833537626803 1.1244075614397504 1.1816519106097114 1.0675341283038282 1.122037597175192 1.0988632435983448 1.014325855571906 1.1370654994956892 1.0 13.35980608809529 -7.130307099057092 0.36560523931440914 0.9914291530474417 1.2798249397453456 0.4574211765486631 0.06023724917601705 0.5691359995005418 0.12806970930008243 0.015559250848825904 0.061775965554326295 7.407862300264668e-08 7.130307099057092 0.2883957866979039 EETQEDKDCPIKEEKGS(ph)PLNAAPYGIESMSQDTEVR ddPTM_A549_MK2206_60min_R1 3 EETQEDKDCPIKEEKGSPLNAAPYGIESMSQDTEVR 36 3 P18031;B4DSN5 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type 1 EET(0.228)QEDKDCPIKEEKGS(0.771)PLNAAPYGIESMSQDTEVR;EET(0.016)QEDKDCPIKEEKGS(0.984)PLNAAPYGIESMSQDTEVR;EET(0.001)QEDKDCPIKEEKGS(0.999)PLNAAPYGIESMSQDTEVR 125.73 2.7610000000000003e-22 32796000.0 3073.02 3206.7799999999997 2476.38 2700.42 4649.400000000001 3557.8999999999996 3043.9300000000003 3159.59 5028.9 4262.099999999999 4140.4 True False 3591.670647874348 3369.991404735176 2827.567921046988 3362.0230212264596 3965.4794190229372 3934.394616457121 3596.9726797318813 3607.471558338558 3889.8621795031136 3299.2886498429934 3112.224410773268 1.1540525919151041 1.0828240383532826 0.9085360012147858 1.0802636884372763 1.274162430349188 1.2641744608254568 1.1557562068084197 1.1591296391902024 1.249865583612151 1.0601062823176195 1.0 11.603730376039216 -4.886417236678068 16.561111088605568 1.1265305633970837 3.247229075486013 0.005792822742143655 0.10865460607361963 839.5885067706856 124952.10709410992 0.017116917420129243 1387.1987446376622 1.2989210751028022e-05 4.886417236678068 2.1206985120889295 EETQEDKDCPIKEEKGS(ph)PLNAAPYGIESMSQDTEVR ddPTM_A549_PD325901_60min_R1 2 EETQEDKDCPIKEEKGSPLNAAPYGIESMSQDTEVR 36 3 P18031;B4DSN5 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type 1 EETQEDKDCPIKEEKGS(0.997)PLNAAPY(0.003)GIESMSQDTEVR;EET(0.001)QEDKDCPIKEEKGS(0.999)PLNAAPYGIESMSQDTEVR 186.95 1.1354e-77 38064000.0 5073.2 4725.4 4919.7 5161.700000000001 5397.6 4108.1 5189.299999999999 5289.700000000001 3987.8 4054.4 5116.7 True False 5588.227529307549 5123.626041792743 5253.580426559394 5480.526485928756 5018.491196709122 4074.644995636215 5386.781651193915 5184.192783810626 3820.206633948052 3798.404492071769 4487.378337433697 1.2453212341581656 1.1417860622652363 1.1707460417888194 1.2213203509519623 1.1183570493365542 0.9080235026419631 1.2004295707044352 1.1552831952153677 0.8513226090342995 0.8464640612950973 1.0 12.131657109534169 -7.844394942368435 0.6658111433879164 0.935559295511007 1.1899965600334421 0.4762753073026599 0.10321710639887806 0.4683879352259158 0.4228418027450809 0.025253163881938066 0.04612534587823306 1.4308860762179016e-08 7.844394942368435 0.2544372645224351 EETVNDPEEAGHR ddPTM_A549_MK2206_60min_R1 1 EETVNDPEEAGHR 13 0 O00567 O00567 NOP56 Nucleolar protein 56 0 47.711999999999996 0.036544 727410.0 0.0 157.3 0.0 0.0 0.0 153.07 0.0 0.0 0.0 123.89 105.73 False True 0.0 165.30589811737744 0.0 0.0 0.0 169.26776580035738 0.0 0.0 0.0 95.90316295465816 79.4743230004487 0.0 2.0799912710982658 0.0 0.0 0.0 2.1298421856251823 0.0 0.0 0.0 1.2067188411798953 1.0 6.312416916750075 EEVGAGYNS(ph)EDEYEAAAAR ddPTM_A549_MK2206_60min_R1 2 EEVGAGYNSEDEYEAAAAR 19 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 EEVGAGYNS(1)EDEYEAAAAR;EEVGAGYNS(1)EDEYEAAAAR 151.57 3.0431e-21 5574800.0 887.53 1202.1399999999999 772.42 578.08 1529.24 1105.4 984.37 1155.8200000000002 1402.56 1177.44 1543.92 True False 1037.3233659748125 1263.3237912449088 881.9607707924932 719.7096259509975 1304.2908217719782 1222.372694294866 1163.2172871083344 1319.661024550297 1084.8823994280835 911.4554862324054 1160.5220539757186 0.8938420105168603 1.0885823211347099 0.7599689878973609 0.6201602317555405 1.123882839885495 1.053295532047202 1.002322431636161 1.1371270541816934 0.934822734054464 0.7853840287738949 1.0 10.180558223853815 -6.794093224579426 24.999997103013488 0.9994122324878343 0.8525857823138852 0.24743562042313505 0.13729418498823376 210.5981368001138 161234.7755237659 0.018160429268792945 0.034321697773951464 1.606596347997205e-07 6.794093224579426 -0.14682645017394913 EEVGAGYNS(ph)EDEYEAAAAR ddPTM_A549_PD325901_60min_R1 2 EEVGAGYNSEDEYEAAAAR 19 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 EEVGAGYNS(1)EDEYEAAAAR;EEVGAGYNS(1)EDEYEAAAAR 160.55 1.1647999999999999e-26 6250700.0 1254.74 1301.35 1554.6599999999999 1746.94 1846.9499999999998 1282.28 1040.43 1290.73 1300.56 1990.79 1631.79 True False 1382.1202811092319 1411.019331588223 1660.1685765300374 1854.8445162113999 1717.2266036315978 1271.837536818579 1080.0241329951418 1264.985377591903 1245.9019860192288 1865.0911796496525 1431.0901747690768 0.9657814060055672 0.9859751373220821 1.1600726535614188 1.2961059679629907 1.1999429762758957 0.8887193548259843 0.7546862888422922 0.8839312853196153 0.8705964222137642 1.3032660083426306 1.0 10.48289886559694 -7.269594714860342 24.805534920758703 0.9144034123608477 1.125877122191766 0.21225597555639153 0.15620321510089835 402.65893541745874 1224739.6984069538 0.01777073305192509 0.028705608412038612 5.3753319024838696e-08 7.269594714860342 0.2114737098309184 EEVGNIS(ph)ILQENDFGDFGMDDREIMR ddPTM_A549_PD325901_60min_R1 2 EEVGNISILQENDFGDFGMDDREIMR 26 1 O60216;E5RFV8;E5RIN7 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EEVGNIS(1)ILQENDFGDFGMDDREIMR;EEVGNIS(1)ILQENDFGDFGMDDREIMR 46.785 0.0025393 9515700.0 1762.0 1890.69 1684.0300000000002 1694.02 1790.33 1737.35 1815.98 1548.67 2040.31 1684.62 1670.85 True False 1940.876942884158 2050.025081677132 1798.3184026950448 1798.6557680014394 1664.5833971032025 1723.2015976165558 1885.0881126423865 1517.7805619418887 1954.5628660691486 1578.2528057009515 1465.3460423908175 1.324517818137672 1.3990040730122482 1.2272312141103265 1.2274614432143298 1.1359660782836762 1.1759690528832552 1.286445698223424 1.0357830287414709 1.333857539124437 1.0770512630081004 1.0 10.517025682885965 -10.953399738055547 1.0961008844787516 0.9935930125648219 1.2423536699682594 0.3767447646684584 0.0977691070644236 0.40037323370477096 0.8173441448880291 0.07954224356938243 0.016625987098195665 1.1132693743513916e-11 10.953399738055547 0.24876065740343745 EEVKEVS(ph)IEDTGVDVDPEKLEMESK ddPTM_A549_PD325901_60min_R1 1 EEVKEVSIEDTGVDVDPEKLEMESK 25 2 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 EEVKEVS(0.998)IEDT(0.002)GVDVDPEKLEMESK 74.83800000000001 1.3577000000000001e-06 2830600.0 1317.8 1273.5 1863.4 1693.7 1898.5 1745.5 1589.2 1601.2 1615.9 1480.0 1672.4 True False 1451.5820858869138 1380.8223143486384 1989.8615295344773 1798.3160023282135 1765.1559094694433 1731.28522671868 1649.677875643608 1569.2628098828993 1547.9893424436184 1386.5525474216204 1466.7054022170773 0.9896889202785351 0.941444895656198 1.3566879391911935 1.2260921652090955 1.2034836080928228 1.1803905706637903 1.1247506644142367 1.069923658500743 1.0554194046764074 0.945351769568519 1.0 10.51836340963305 -8.535346268494175 1.2618980083777391 1.021095492001365 1.1551601743330826 0.25762058796284104 0.10826717112455908 0.48650228065595075 1.5039285076110651 0.021859321341209985 0.025522390739651683 2.915101839539467e-09 8.535346268494175 0.13406468233171753 EEVRKS(ph)FVESVEEIPFADDVEDTYDDKTEDSSLQEK ddPTM_A549_PD325901_60min_R1 1 EEVRKSFVESVEEIPFADDVEDTYDDKTEDSSLQEK 36 3 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 EEVRKS(0.5)FVES(0.5)VEEIPFADDVEDTYDDKTEDSSLQEK 68.154 7.5968e-05 3265900.0 929.99 578.83 670.92 684.3 899.42 1001.3 857.9 687.34 806.76 809.33 725.18 True False 1024.4019001775466 627.6100355040617 716.4526657697072 726.567656841941 836.2478420305539 993.1457447799568 890.5478539608927 673.6304644922011 772.8546827834723 758.2287656788784 635.987457294774 1.6107265771166714 0.9868276933851079 1.1265201185212028 1.1424245061883098 1.314881028609596 1.5615807094756011 1.4002600896390516 1.0591882855010142 1.2152042841707515 1.1922071056307746 1.0 9.312854503276396 -10.07005244537679 0.6029443543069836 0.9994383019626704 1.2717647249107078 0.09431184655390301 0.19285927109288376 0.9852914987934404 0.6896622091493001 0.12856524420719215 0.04403929144086462 8.510352610273816e-11 10.07005244537679 0.27232642294803744 EEVVGGDDS(ph)DGLR ddPTM_A549_MK2206_60min_R1 2 EEVVGGDDSDGLR 13 0 P25490 P25490 YY1 Transcriptional repressor protein YY1 1 EEVVGGDDS(1)DGLR;EEVVGGDDS(1)DGLR 239.31 1.5224999999999997e-56 18984600.0 2698.3999999999996 2999.8 2721.1000000000004 2767.7 5100.7 3940.8 3207.9 4243.4 5320.799999999999 3050.7 3009.1 True False 3153.8239504539965 3152.4770068182374 3106.992896874048 3445.7866242467744 4350.393786856435 4357.812840308675 3790.7339062698215 4844.914944867477 4115.647295571631 2361.544751196832 2261.8574230648833 1.3943513496003088 1.3937558462666222 1.3736466610101272 1.5234322858324254 1.9233722437559853 1.9266523149826615 1.6759384864910123 2.14200722621255 1.8195874123643072 1.044073214834589 1.0 11.143292276094096 -10.733710233992799 1.0353297195571443 1.0079376250329148 1.692939863171168 0.5261740603887951 0.24174016258234218 0.35681133069291776 0.6915707560242013 0.17306256870526637 0.046738720693918705 1.846246844321304e-11 10.733710233992799 0.6850022381382532 EEVVGGDDS(ph)DGLR ddPTM_A549_PD325901_60min_R1 2 EEVVGGDDSDGLR 13 0 P25490 P25490 YY1 Transcriptional repressor protein YY1 1 EEVVGGDDS(1)DGLR;EEVVGGDDS(1)DGLR 248.36 1.4633999999999998e-68 23008000.0 4535.4 4102.0 3890.7 3900.3999999999996 5076.9 3758.5 4204.6 4019.2 4150.4 4288.2 4570.6 True False 4995.830469214985 4447.689935970253 4154.74629867972 4141.318849548896 4720.316058354186 3727.8920221267035 4364.608353845406 3939.0339029985953 3975.973121404787 4017.4423201712107 4008.445175420576 1.2463262563372368 1.1095798349053358 1.0364982223422312 1.03314843245034 1.1775927702089424 0.9300094822266252 1.0888531993923205 0.9826837416044494 0.9918990898977726 1.0022445472887602 1.0 11.96882702690434 -2.0000000000000004 0.4120458457725851 0.9987371174862509 4.976804884874982 0.5426094020932182 0.06022140037822997 32.69625578310065 0.37331615860006767 0.011955508798053906 107.83615059059731 0.00999999999999999 2.0000000000000004 3.9780677673887306 EEWDARQS(ph)IIR ddPTM_A549_MK2206_60min_R1 1 EEWDARQSIIR 11 1 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F5H7X4;Q66PJ3-7;Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2 H7BZV4;Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 EEWDARQS(1)IIR 67.275 0.0013129 3091000.0 194.9 560.08 268.05 109.69 449.38 258.24 427.9 552.69 335.44 355.47 316.62 True False 227.79435515249182 588.5856797048997 306.06352063764257 136.5640549241712 383.27679729008645 285.5667853941615 505.6438911726856 631.035500042138 259.4633755876087 275.16908011536316 237.99451573254592 0.9571411948352757 2.4731060625209618 1.286010812877686 0.5738117725268909 1.6104438209862206 1.199888092022576 2.1246031221195003 2.651470762256071 1.090207372169824 1.1561992479885266 1.0 7.894784518700295 -7.367852339628164 14.48571734783711 1.277670240199685 1.39247204962534 0.0 0.6622349358311763 10.511668126662055 1396.2554870987626 0.10825074151140471 0.17305216967507075 4.2869425191207786e-08 7.367852339628164 0.1148018094256551 EEY(ph)PDRIMNTFSVMPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 EEYPDRIMNTFSVMPSPK 18 1 Q9BVA1;Q13885 Q9BVA1 TUBB2B;TUBB2A Tubulin beta-2B chain;Tubulin beta-2A chain 2 EEY(0.919)PDRIMNT(0.182)FS(0.186)VMPS(0.713)PK 40.756 0.0335 14804000.0 3239.2 3579.4 3327.1 4204.1 3440.0 5439.3 3768.9 4371.7 4822.7 4125.4 5453.9 True False 3568.041199426993 3881.0485999053913 3552.8970134776023 4463.777708796149 3198.3862673557455 5395.004144194165 3912.3275519212148 4284.503013967696 4620.01869039101 3864.9215399548293 4783.1048751206135 0.7459675864491722 0.8114077991667545 0.7428014033223577 0.9332385187735588 0.6686841185507338 1.1279293022104437 0.8179472652316785 0.8957576983631694 0.9659036987505963 0.8080361273402706 1.0 12.223731709094745 -6.500834951946088 0.2865364294045185 1.0070824264552405 0.6596029925445751 0.13174718702005173 0.11890210290186347 2.9220561998417 0.30419342009266753 0.050176575425544066 0.3343754093772137 3.156203870326388e-07 6.500834951946088 -0.3474794339106654 EFAGEDT(ph)SDLFLEER ddPTM_A549_MK2206_60min_R1 1 EFAGEDTSDLFLEER 15 0 O14980 O14980 XPO1 Exportin-1 1 EFAGEDT(0.5)S(0.5)DLFLEER 51.643 0.022355 1524900.0 605.86 935.85 626.89 450.82 1161.0 1061.4 879.8 971.84 1282.6 1344.6 1223.5 True False 708.1143561451446 983.4807676614603 715.7924284742833 561.2709202380788 990.2184379673998 1173.7166434997016 1039.6482716843382 1109.6012961351776 992.0931478913271 1040.8539261347426 919.6711831178371 0.7699647103702 1.069383042238312 0.77831342507398 0.6102952126164025 1.0767092153636866 1.2762350990716143 1.1304565052911182 1.2065195871131311 1.0787476721059885 1.13176746780961 1.0 9.844974325640134 -6.831489164304055 15.382947938559438 1.0788797945816833 0.8236969291389432 0.5794035171931546 0.12712676774988602 1.273098090240153 278.576998592085 0.019476148539621707 0.03680877273924183 1.474045318110726e-07 6.831489164304055 -0.25518286544274005 EFAGEDT(ph)SDLFLEER ddPTM_A549_PD325901_60min_R1 1 EFAGEDTSDLFLEER 15 0 O14980 O14980 XPO1 Exportin-1 1 EFAGEDT(0.57)S(0.43)DLFLEER 133.66 1.9371e-09 4761500.0 1366.1 1476.6 1566.1 1255.6 1622.0 1539.6 1505.9 1314.6 1532.4 1925.2 1639.2 True False 1504.7854663303328 1601.0382641281499 1672.384963724345 1333.155560325502 1508.0763155962272 1527.0620080527528 1563.2078485600996 1288.3792717162505 1467.9985570645465 1803.642543443312 1437.588791744937 1.0467426255485985 1.1136969579352514 1.163326379092323 0.9273552826655843 1.0490317705981367 1.0622383930798553 1.0873817725461583 0.8962084840355656 1.0211533127513455 1.2546303600865314 1.0 10.489435350600159 -6.251506096671998 24.994653472652494 1.0096833415995345 1.1084994811760598 0.0472749266726753 0.09394056160999438 557.9897021535189 1404040.2043057936 0.0076615237712105615 0.02000390522765369 5.603945504308317e-07 6.251506096671998 0.09881613957652524 EFAGEDTS(ph)DLFLEER ddPTM_A549_PD325901_60min_R1 1 EFAGEDTSDLFLEER 15 0 O14980 O14980 XPO1 Exportin-1 1 EFAGEDT(0.365)S(0.635)DLFLEER 168.5 3.9935999999999996e-27 5789600.0 1378.6 1625.8 1420.1 1257.2 1687.9 1691.6 1473.4 1511.6 1596.8 1630.6 1532.4 True False 1518.554457128319 1762.8118717455957 1516.4765257550243 1334.8543886916386 1569.3477269388848 1677.8241704481932 1529.4710432754162 1481.44995217274 1529.6920490215791 1527.6436377200632 1343.9245146839567 1.1299402909436689 1.3116896466169057 1.128394124212881 0.9932510152964573 1.1677350251386251 1.2484511980516688 1.1380632070954473 1.1023312217212768 1.1382276551308452 1.1367034539728675 1.0 10.392236392012792 -14.043998004541779 0.19969104614452513 0.5228215519769115 1.181012420852354 0.023967627307028616 0.08665598575182493 26.939620540760867 0.4432160216024636 5.118193548077165 0.07112468806224183 9.036536257412407e-15 14.043998004541779 0.6581908688754425 EFAPS(ph)DEELDSYR ddPTM_A549_MK2206_60min_R1 4 EFAPSDEELDSYR 13 0 I3L0X5;O75391;I3L4C3 I3L0X5 SPAG7 Sperm-associated antigen 7 1 EFAPS(0.998)DEELDS(0.002)YR;EFAPS(1)DEELDSYR;EFAPS(1)DEELDSYR;EFAPS(1)DEELDSYR 229.75 2.1869999999999997e-46 27048900.0 7311.1 8203.8 6501.3 6159.3 10372.9 8302.3 7225.2 7386.299999999999 11175.300000000001 11003.7 11142.9 True False 8545.034940766454 8621.338378737071 7423.282099315443 7668.328776501484 8847.060150897545 9180.843875379289 8537.925315496346 8433.330644595051 8644.112393287036 8517.956527598444 8375.810401605031 1.0202039601002664 1.0293139368442474 0.8862762817425931 0.9155327554969517 1.0562631825097437 1.096114099433291 1.0193551317565939 1.0068674241932456 1.0320329590591724 1.0169710295694103 1.0 13.032013069843886 -6.769507765057873 24.99995403564472 1.0237447959436439 0.9621122133804667 0.33858911555620985 0.04581458404301114 187.43382162753764 580766.7447113943 0.007040294098796289 0.013473150027467354 1.7001695548379491e-07 6.769507765057873 -0.06163258256317716 EFAPS(ph)DEELDSYR ddPTM_A549_PD325901_60min_R1 3 EFAPSDEELDSYR 13 0 I3L0X5;O75391;I3L4C3 I3L0X5 SPAG7 Sperm-associated antigen 7 1 EFAPS(1)DEELDSYR;EFAPS(1)DEELDSYR;EFAPS(1)DEELDSYR 183.89 3.7765999999999997e-25 36387300.0 5081.52 5387.370000000001 5928.1 5196.200000000001 5574.25 5321.6 4698.27 4765.16 6330.5 6049.6 4901.7 True False 5597.392169582692 5841.382576876658 6330.4165145612005 5517.157472573572 5182.733910118539 5278.262653970858 4877.065235841995 4670.1151456042935 6064.451099906757 5667.627223568803 4298.821974436407 1.302075825160574 1.358833329598974 1.4725933179382578 1.2834114800245697 1.2056172460591408 1.227839320948586 1.1345120279100178 1.0863709112347144 1.4107239462275782 1.318414034652331 1.0 12.069725650411119 -10.986466224071439 1.1921706828270935 0.9961011432101274 1.2850581543068693 0.0 0.1420795561461863 0.3786040184265575 0.9355853995005237 0.09170999155654219 0.0198621524095766 1.0316533100088647e-11 10.986466224071439 0.2889570110967419 EFAPS(ph)DEELDSYRR ddPTM_A549_MK2206_60min_R1 2 EFAPSDEELDSYRR 14 1 I3L0X5;O75391;I3L4C3 I3L0X5 SPAG7 Sperm-associated antigen 7 1 EFAPS(1)DEELDSYRR;EFAPS(1)DEELDSYRR 110.35 4.7437e-06 8612900.0 1186.54 1125.87 1071.5 739.8299999999999 1467.96 1058.56 1164.04 973.77 1994.4499999999998 1543.1100000000001 1802.9299999999998 True False 1386.798943882184 1183.1719740204176 1223.454812024749 921.0883832122311 1252.0250285948528 1170.5761165847414 1375.5310004221838 1111.8048795455543 1542.7102594821895 1194.52037926356 1355.2127226633777 1.0233072053490837 0.8730525874160543 0.9027769526988448 0.6796633235570804 0.9238586737396238 0.8637582108026753 1.0149926852213096 0.8203914123242159 1.1383528457807908 0.881426479612727 1.0 10.404303608451038 -8.759900787387567 24.99999977361625 1.065333290433026 0.8854501825784289 0.13749819547207964 0.10795134766250854 28.732533503034336 466863.34622889606 0.01650731061626503 0.01823492792034203 1.7381978668471125e-09 8.759900787387567 -0.17988310785459705 EFAPS(ph)DEELDSYRR ddPTM_A549_PD325901_60min_R1 2 EFAPSDEELDSYRR 14 1 I3L0X5;O75391;I3L4C3 I3L0X5 SPAG7 Sperm-associated antigen 7 1 EFAPS(1)DEELDSYRR;EFAPS(1)DEELDSYRR 149.0 1.0646e-13 13303700.0 1835.25 1999.83 1894.8000000000002 2075.14 2378.0 2697.1 2339.7 1832.52 2609.2 2477.1 2758.5 True False 2021.5632289603584 2168.3626925039944 2023.3925223580184 2203.316684815119 2210.977483654642 2675.1357118206565 2428.7385638329656 1795.9689510158712 2499.5443977374143 2320.695483255469 2419.2219875722353 0.8356253536654815 0.8963057973361155 0.8363815031247115 0.9107542408814728 0.91392087828758 1.1057834814510918 1.0039337341962076 0.7423745982146028 1.0332017527030601 0.9592734751821428 1.0 11.240327441609368 -5.539682007203075 0.3133552863447071 1.0136859583675766 0.7181807156184704 0.16018124233209252 0.0905550221860778 6.024166269207145 0.4708226723972455 0.03441636913137016 0.6589844848770702 2.886143980069249e-06 5.539682007203075 -0.29550524274910617 EFDEDS(ph)DEKEEEEDTYEK ddPTM_A549_MK2206_60min_R1 4 EFDEDSDEKEEEEDTYEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK 261.07 2.3887999999999995e-88 114098000.0 9315.09 9398.41 7293.32 8203.05 15847.8 11177.3 9996.78 12050.8 16352.699999999999 10158.2 10962.369999999999 True False 10887.249459914961 9876.748925145208 8327.622444830931 10212.797618248904 13516.60961345372 12360.07446710874 11813.06552558373 13759.037804027193 12648.839559895921 7863.455564823697 8240.110982979555 1.3212503426717468 1.1986184343325261 1.0106201799990482 1.239400493433165 1.6403431508839008 1.4999888342085703 1.4336051480355456 1.6697636515390768 1.5350326695869583 0.9542900066596358 1.0 13.008448053322518 -3.2618188888694712 12.914308753444796 1.3141720509350572 1.2642055678666877 0.0 0.24675364148125176 0.0 0.0 0.035857130080935135 0.0 0.0005472441291357108 3.2618188888694712 -0.04996648306836948 EFDEDS(ph)DEKEEEEDTYEK ddPTM_A549_PD325901_60min_R1 4 EFDEDSDEKEEEEDTYEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK 223.97 1.5656999999999997e-64 150375000.0 21156.6 21825.0 24872.6 22068.7 25602.5 15955.3 18541.25 16628.1 20396.06 21323.4 22898.699999999997 True False 23304.402457334243 23664.269344844153 26560.604207094173 23431.83347734583 23804.26872383008 15825.365326762858 19246.847414911317 16296.439501007893 19538.884527409242 19977.036884925787 20082.305066819055 1.1604445993522372 1.1783642000311703 1.3225874280228356 1.166790037268233 1.185335480395656 0.7880253424150141 0.9583983188619059 0.8114825189033529 0.9729403304251324 0.9947581623950531 1.0 14.293637252304713 -7.135185821045929 7.55351687991136 0.957566039286983 1.2085252051521655 0.7446527508449075 0.08066795948525525 0.1198042686827904 6.868698129610062 0.012239072044576086 0.021267551056784 7.325110474771941e-08 7.135185821045929 0.2509591658651825 EFDEDVYNHKT(ph)PESNIK ddPTM_A549_MK2206_60min_R1 1 EFDEDVYNHKTPESNIK 17 1 E9PPJ9;A0A1W2PQA7;A0A1W2PNY5;A0A1W2PQZ6;A0A1W2PRF0;A0A1W2PRJ0;A0A1W2PPP6;A0A1X7SBS0;A0A1W2PS93;A0A1W2PR08;A0A1W2PRF5;G5E9D4;Q96EB1;Q96EB1-3;Q96EB1-2 E9PPJ9 ELP4 Elongator complex protein 4 1 EFDEDVY(0.001)NHKT(0.998)PES(0.001)NIK 65.78399999999999 0.0013289 2895800.0 919.02 1191.1 1104.7 921.88 1580.3 1089.6 899.85 1158.3 1961.6 1638.7 1921.9 True False 1074.12810811823 1251.72190240056 1261.3630712494078 1147.740641384766 1347.839963410752 1204.9007487820563 1063.3410971529354 1322.492572144978 1517.30073203152 1268.5165318734223 1444.6391882584162 0.7435269075132487 0.866459883252629 0.8731336388361741 0.7944825605682371 0.9329941859293182 0.8340496080786951 0.7360599835553717 0.9154483575510007 1.0502973644655873 0.8780853670477273 1.0 10.496493496204772 -8.566636070294425 4.556979034053602 1.0231245709668328 0.8317339193592986 0.4374487781100781 0.07013702451316815 0.07717593767197878 3.5755536180436205 0.009219377843952775 0.010575744371133733 2.712463667702216e-09 8.566636070294425 -0.1913906516075342 EFDEDVYNHKT(ph)PESNIK ddPTM_A549_PD325901_60min_R1 1 EFDEDVYNHKTPESNIK 17 1 E9PPJ9;A0A1W2PQA7;A0A1W2PNY5;A0A1W2PQZ6;A0A1W2PRF0;A0A1W2PRJ0;A0A1W2PPP6;A0A1X7SBS0;A0A1W2PS93;A0A1W2PR08;A0A1W2PRF5;G5E9D4;Q96EB1;Q96EB1-3;Q96EB1-2 E9PPJ9 ELP4 Elongator complex protein 4 1 EFDEDVYNHKT(1)PESNIK 105.32 6.6983e-09 4548700.0 1307.9 1663.0 1493.0 1407.9 1845.1 1151.8 1371.9 1671.1 1936.1 1770.6 1570.5 True False 1440.6770451749092 1803.1468462990074 1594.3239581383364 1494.8627854271072 1715.506541249444 1142.4201226780735 1424.1084052324848 1637.7685995474112 1854.732449969113 1658.8040138275137 1377.3384562197562 1.0459862197770853 1.3091530539617149 1.1575397106925474 1.0853271239735136 1.2455228658595825 0.8294403728576347 1.0339567582692009 1.1890821694200218 1.3466061603039914 1.204354678646139 1.0 10.42766740412824 -5.991441624949782 24.844968001520204 1.1367201284866388 1.1915137876011688 0.013562061640293499 0.14287262624460464 847.2585013631885 2459544.2016066685 0.023071544697670476 0.07157405895040181 1.0199018394285855e-06 5.991441624949782 0.054793659114529936 EFDELNPS(ph)AQR ddPTM_A549_MK2206_60min_R1 4 EFDELNPSAQR 11 0 P16615-4;P16615-5;P16615-2;P16615;P16615-3;H7C5W9 P16615-4 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 1 EFDELNPS(1)AQR;EFDELNPS(1)AQR;EFDELNPS(1)AQR;EFDELNPS(1)AQR 215.77 3.6735999999999997e-31 105822000.0 10461.61 10327.060000000001 9491.460000000001 8409.1 12774.010000000002 9920.5 9726.45 9518.29 14579.15 13148.18 14143.08 True False 12227.274006192209 10852.663243560351 10837.49175001439 10469.32987749885 10894.970050628732 10970.280725305063 11493.620063791926 10867.536756040601 11276.995803118532 10177.997006192403 10630.962906849387 1.1501567744455528 1.020854210352679 1.0194271059898006 0.9847960122928847 1.0248337940873868 1.0319178818916825 1.0811457216529974 1.0222532851693795 1.0607689916642373 0.9573918275676474 1.0 13.37598465544213 EFDELNPS(ph)AQR ddPTM_A549_PD325901_60min_R1 4 EFDELNPSAQR 11 0 P16615-4;P16615-5;P16615-2;P16615;P16615-3;H7C5W9 P16615-4 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 1 EFDELNPS(1)AQR;EFDELNPS(1)AQR;EFDELNPS(1)AQR;EFDELNPS(1)AQR 145.81 2.0709e-11 155272000.0 9215.099999999999 9396.6 9031.6 9485.4 10514.3 9118.7 9618.300000000001 9984.599999999999 10125.6 9350.3 10819.699999999999 True False 10150.610168201923 10188.484459370575 9644.538687422775 10071.291615093605 9775.811840365855 9044.440330495347 9984.32966983571 9785.449320232829 9700.056244722511 8759.92046226782 9488.94549172932 1.069730053465827 1.0737214654938192 1.0163973115694542 1.061371005226225 1.0302316362641741 0.9531554732165539 1.0522064520802836 1.0312472896763865 1.0222480731054042 0.9231711226398205 1.0 13.212032053849187 -2.0000000000006497 0.30216254697851286 1.0088118475238435 1.6117629640450828 0.31116718847044567 0.03760684569742974 37.02693588887113 0.46305358059328555 0.008667084382688966 12.303259294667034 0.00999999999998504 2.0000000000006497 0.6029511165212393 EFDGKS(ph)LVSVTK ddPTM_A549_MK2206_60min_R1 2 EFDGKSLVSVTK 12 1 P08238;Q58FF7;Q58FF8 P08238 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 1 EFDGKS(0.999)LVS(0.001)VTK;EFDGKS(0.967)LVS(0.033)VTK 92.977 7.4079e-05 23242600.0 5333.5 5323.5 5860.9 4974.5 6806.700000000001 5774.0 4015.5 5345.2 7115.5 7030.4 7114.4 True False 6233.664408444409 5594.443411493063 6692.063749692811 6193.25272331379 5805.443446780967 6385.000847528999 4745.0643725261025 6102.898468988465 5503.850611118619 5442.227757175146 5347.698132548874 1.1656724545656538 1.046140465080175 1.2513914555052066 1.1581156171883433 1.0855967002785771 1.1939718153997063 0.8873096900599476 1.141219701957941 1.0291999426106944 1.0176766942118358 1.0 12.384702314983748 -7.735168754027913 24.99988024630244 1.0171001161226645 1.1474504564992871 0.4522034267585867 0.07397407585175218 152.90583417364664 145509.31704271137 0.010436884473636809 0.015477728779993549 1.840056870703652e-08 7.735168754027913 0.13035034037662263 EFDGKS(ph)LVSVTK ddPTM_A549_PD325901_60min_R1 1 EFDGKSLVSVTK 12 1 P08238;Q58FF7;Q58FF8 P08238 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 1 EFDGKS(0.999)LVS(0.001)VTK 48.216 0.009419799999999999 3597000.0 2110.8 2322.9 2425.4 2356.7 2509.1 2904.2 3014.5 2650.7 2923.5 2510.5 3178.3 True False 2325.086862111169 2518.658935218259 2590.002229115018 2502.268006545965 2332.8694719250893 2880.5491580844428 3129.2184470976936 2597.8297090660785 2800.635461745108 2351.98660155539 2787.3892489036916 0.8341450204795219 0.9035906758300345 0.929185699533602 0.8977102884106094 0.8369370990587807 1.033421923119418 1.1226341811888838 0.9319938756626227 1.0047521934177748 0.8437955346496546 1.0 11.444698768356325 -7.268126310724041 24.936369974947418 1.0084232820996961 0.8852885000703137 0.35827876818786475 0.07010835299136836 269.1078712158225 1003534.4673832194 0.007274175470666655 0.011790958429562327 5.393537334195281e-08 7.268126310724041 -0.12313478202938244 EFDRHS(ph)GSDR ddPTM_A549_MK2206_60min_R1 5 EFDRHSGSDR 10 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 EFDRHS(0.973)GS(0.027)DR;EFDRHS(0.976)GS(0.024)DR;EFDRHS(0.998)GS(0.002)DR;EFDRHS(0.986)GS(0.014)DR;EFDRHS(0.841)GS(0.159)DR 116.19 3.4884e-05 468289300.0 7058.835 8106.6 6777.179999999999 7183.63 10613.79 7874.105 7317.080000000001 9599.404 13328.91 16061.58 18301.43 True False 8250.193776053562 8519.191313911833 7738.286031691911 8943.619672485403 9052.5155510026 8707.337564692121 8646.498722182365 10960.148913941806 10309.933166895518 12433.257922748227 13756.679837227859 0.5997227436904629 0.6192767015524696 0.5625111671750058 0.6501292301855048 0.6580450848688788 0.6329534210085067 0.628530926392828 0.7967146901450614 0.7494492340364808 0.9037978690978741 1.0 13.747844698401316 -10.22646081725745 0.26037540796165504 1.1427388458035999 0.5670262330154933 0.8836866405103783 0.045025789493483674 0.5837775381269154 0.06794713113765431 0.10915759445074455 0.02796986241749104 5.936619069017028e-11 10.22646081725745 -0.5757126127881066 down EFDRHS(ph)GSDR ddPTM_A549_PD325901_60min_R1 5 EFDRHSGSDR 10 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 EFDRHS(0.999)GS(0.001)DR;EFDRHS(0.951)GS(0.049)DR;EFDRHS(0.93)GS(0.07)DR;EFDRHS(0.999)GS(0.001)DR;EFDRHS(0.97)GS(0.03)DR 175.74 3.9427000000000006e-11 392917000.0 5346.88 6125.03 5746.129999999999 6631.31 7905.219999999999 6425.72 5187.93 7340.820000000001 6486.750000000001 7052.740000000001 8746.7 True False 5889.691321434982 6641.20777389465 6136.096936086698 7040.910957902284 7349.984618728491 6373.391066760676 5385.359515094227 7194.401586338114 6214.13445578077 6607.428792771864 7670.911349899612 0.7677955138292739 0.8657651576147549 0.7999175920820674 0.9178715066227988 0.9581631547371068 0.8308518735318305 0.7020495048694188 0.9378809450629704 0.8100907665765285 0.8613616415810013 1.0 12.905182273325702 -10.835003973851746 0.9132284736307422 1.00693376472132 0.8440590033305346 0.05482484105041885 0.08243144832250508 0.5362118885117951 0.7361694425209405 0.0614147195764059 0.012715871493624038 1.4621637954040778e-11 10.835003973851746 -0.16287476139078527 EFDSDS(ph)LR ddPTM_A549_MK2206_60min_R1 2 EFDSDSLR 8 0 Q12955-6;Q12955-7;Q12955-5;Q12955-4;Q12955;D6RFK6;B1AQT1;A0A087WZ26 Q12955-6 ANK3 Ankyrin-3 1 EFDS(0.165)DS(0.835)LR;EFDSDS(1)LR 117.31 0.0012665999999999999 13806800.0 1902.93 1904.9 1352.42 1563.97 2035.2200000000003 2260.03 1668.52 1929.74 2585.1000000000004 2417.42 2215.54 True False 2224.0980618282765 2001.8512735142547 1544.2134921871314 1947.1427202092816 1735.8418340396324 2499.1848745135007 1971.6684863272928 2203.286554580895 1999.5789775564244 1871.3231430288952 1665.3602722066971 1.3355056554106577 1.2020529773186481 0.9272549117200692 1.1692020956097426 1.0423221107223504 1.5006872183890507 1.183929098845813 1.3230089556906597 1.2006885302402877 1.1236746632302483 1.0 10.701618598115386 -10.453390519434038 0.9168230357190951 1.0067293256860281 1.2038473139803254 0.1117333595964729 0.1467956234007789 0.663839121924459 1.049681044318948 0.0794707496585094 0.026571632686771988 3.5205416008091226e-11 10.453390519434038 0.19711798829429727 EFDSDS(ph)LR ddPTM_A549_PD325901_60min_R1 2 EFDSDSLR 8 0 Q12955-6;Q12955-7;Q12955-5;Q12955-4;Q12955;D6RFK6;B1AQT1;A0A087WZ26 Q12955-6 ANK3 Ankyrin-3 1 EFDS(0.118)DS(0.882)LR;EFDS(0.004)DS(0.996)LR 99.65299999999999 0.0024043000000000003 19607200.0 1337.01 1126.08 1282.6999999999998 1161.76 1897.55 886.27 1315.6599999999999 1320.4699999999998 1291.04 1437.64 1189.6399999999999 True False 1472.7422709452599 1220.9787135781037 1369.7517355017033 1233.5192766516052 1764.272634192121 879.0525109618818 1365.7281612567772 1294.1321899613251 1236.7820785125373 1346.8671650508236 1043.321821749296 1.4115896363367266 1.1702800498612569 1.312875573909779 1.1822998914979201 1.691014792764552 0.8425516390407799 1.3090190704215456 1.2403959765659893 1.1854272121317986 1.2909412388141035 1.0 10.026968523082699 -11.104466888678578 0.1877590080418066 0.7609477542419242 1.3510243910992226 0.0 0.20780894314435405 11.209744255691346 0.5072013560981511 1.626821241898363 0.27103212492195405 7.86200130046622e-12 11.104466888678578 0.5900766368572984 EFEDDLVKESSSCGKDT(ph)PSK ddPTM_A549_MK2206_60min_R1 2 EFEDDLVKESSSCGKDTPSK 20 2 K7EPP5;O43148;O43148-2 K7EPP5 RNMT mRNA cap guanine-N7 methyltransferase 1 EFEDDLVKES(0.073)S(0.222)S(0.017)CGKDT(0.684)PS(0.004)K;EFEDDLVKES(0.08)S(0.08)S(0.245)CGKDT(0.576)PS(0.019)K 84.12700000000001 3.0557e-05 54656000.0 12939.3 15352.0 11648.9 10218.5 15904.7 12921.5 9646.599999999999 9901.9 18524.6 19470.8 30092.0 True False 15123.137504487613 16133.351226306286 13300.889183196536 12722.0329587259 13565.139698828694 14288.844553402489 11399.262352387066 11305.524648296958 14328.80767770752 15072.33275694211 22619.325903050234 0.6685936428568919 0.7132551737154418 0.5880320766501225 0.5624408531560317 0.59971458729455 0.6317095661756934 0.5039611879348653 0.4998170456871307 0.6334763351977377 0.6663475658622344 1.0 14.465268314588158 -10.373183840466858 0.762746903547227 0.9992045917547355 0.5969839894261574 0.23990043324575616 0.11306967886784189 0.20390228329036872 0.21748907549036478 0.04587325507054256 0.014120773595932891 4.234636724088705e-11 10.373183840466858 -0.40222060232857815 EFEDDLVKESSSCGKDT(ph)PSK ddPTM_A549_PD325901_60min_R1 2 EFEDDLVKESSSCGKDTPSK 20 2 K7EPP5;O43148;O43148-2 K7EPP5 RNMT mRNA cap guanine-N7 methyltransferase 1 EFEDDLVKES(0.01)S(0.01)S(0.046)CGKDT(0.925)PS(0.009)K;EFEDDLVKES(0.003)S(0.017)S(0.096)CGKDT(0.442)PS(0.442)K 90.694 1.3076e-06 131445000.0 12346.7 12512.9 15021.0 13324.8 15275.5 14866.800000000001 15032.0 15697.8 13566.5 14545.9 17466.5 True False 13600.127894839861 13567.40599702637 16040.415388610814 14147.842633183547 14202.601577614165 14745.729709871834 15604.050985826016 15384.695064314126 12996.347183774584 13627.469391581175 15318.231229266068 0.8878393132528445 0.8857031725115443 1.0471454013544974 0.9235950562068518 0.9271698125616193 0.9626261341256914 1.0186587963245963 1.0043388713783792 0.8484234889302731 0.8896242123271629 1.0 13.90296210082756 EFEENGLEKDLDEEGS(ph)EK ddPTM_A549_MK2206_60min_R1 1 EFEENGLEKDLDEEGSEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 EFEENGLEKDLDEEGS(1)EK 45.395 0.01039 2020900.0 1078.6 1389.7 1308.5 1062.3 2594.2 1369.7 1492.2 1247.6 2382.7 1635.2 1937.4 True False 1260.6413107618139 1460.4297941113757 1494.0649757670408 1322.5635476884597 2212.5966165159607 1514.640744866724 1763.3134246503419 1424.4511206147588 1843.0222543900402 1265.8071843042785 1456.2901104801788 0.8656525933188861 1.0028426229096838 1.0259391071978141 0.9081731299077312 1.5193378026761488 1.040068001538035 1.2108256534605795 0.9781369181619164 1.2655598229547445 0.8691998765870265 1.0 10.50808207100852 EFEPAS(ph)AR ddPTM_A549_PD325901_60min_R1 1 EFEPASAR 8 0 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EFEPAS(1)AR 55.06399999999999 0.021647 2502900.0 518.96 626.33 533.31 635.17 588.76 615.25 404.18 544.58 793.87 657.31 523.91 True False 571.6444371618398 679.1130272053261 569.503623653554 674.4030083242671 547.4075287117352 610.2396079854876 419.5612910757823 533.717924685255 760.5064046572905 615.8073344227737 459.4723913391225 1.2441322872431884 1.47802792943895 1.2394730007471129 1.4677770003954622 1.1913828535297357 1.3281311771681368 0.9131371089631303 1.161588671584261 1.6551732356340516 1.3402488289405514 1.0 8.843834365598537 -11.215774297588723 1.6751434984968625 1.0000878281023922 1.346811995985295 0.0 0.21346278305489128 0.4275368013229467 2.162437349060879 0.16005230889581412 0.033237926842913434 6.0845113057433055e-12 11.215774297588723 0.34672416788290294 EFET(ph)PEK ddPTM_A549_PD325901_60min_R1 2 EFETPEK 7 0 Q9Y2X3;F8WED0 Q9Y2X3 NOP58 Nucleolar protein 58 1 EFET(1)PEK;EFET(1)PEK 123.35 0.0066393 19443200.0 8352.3 9592.7 8441.3 8929.599999999999 11106.2 7884.4 8578.599999999999 9385.7 9134.400000000001 10284.9 10323.8 True False 9200.219347361717 10401.110494583581 9014.177379660512 9481.161111406984 10326.138826309996 7820.192060464489 8905.063317390042 9198.494850560786 8750.512933731661 9635.509658767984 9054.038047960217 1.0161454257898146 1.148781398917011 0.9955974706436445 1.0471748695095215 1.1405009313646932 0.8637242321094839 0.983546045446127 1.0159549586422507 0.9664762714027983 1.0642223511462674 1.0 13.144345653926013 -7.243160857650084 24.99847604713272 0.9788697780605048 1.0686752167237756 0.32680372317765716 0.06228874791260275 656.8624558020507 898353.3274927067 0.007826075192114331 0.013538010099902182 5.712670067935131e-08 7.243160857650084 0.08980543866327084 EFFT(ph)KELTK ddPTM_A549_PD325901_60min_R1 2 EFFTKELTK 9 1 E9PL40;E9PKD8;E5RFV0;H0YB98;Q96SJ8 E9PL40 TSPAN18 Tetraspanin;Tetraspanin-18 1 EFFT(0.963)KELT(0.037)K;EFFT(0.953)KELT(0.047)K 43.628 0.026036 31780000.0 7815.0 7185.5 6902.2 6917.6 8924.7 8460.7 8214.8 7593.9 8072.3 6393.9 6664.700000000001 True False 8608.373046901073 7791.047302514444 7370.624798300349 7344.884440990519 8297.859860543556 8391.79886433614 8527.418709311043 7442.433707200699 7733.049303179415 5990.188062810197 5844.984151014203 1.4727795361784473 1.3329458388971962 1.2610170717094966 1.2566132347366685 1.419654809346872 1.43572653877599 1.4589293125510687 1.2733026326357637 1.3230231431573 1.0248424816978843 1.0 12.51298339747989 -10.439031001550296 0.5840626531695974 0.9692554672311073 1.3665577050124675 0.7678403384970619 0.07395418390682348 0.3882963452077074 0.21647827421281648 0.07872190865773045 0.017776931125987203 3.638890594498544e-11 10.439031001550296 0.3973022377813602 EFGDQAEAAQDATLTTTTFQNEDEKNKEVYMT(ph)PLR ddPTM_A549_MK2206_60min_R1 1 EFGDQAEAAQDATLTTTTFQNEDEKNKEVYMTPLR 35 2 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 EFGDQAEAAQDAT(0.005)LT(0.005)T(0.025)T(0.025)T(0.025)FQNEDEKNKEVY(0.004)MT(0.91)PLR 70.40100000000001 9.598899999999999e-05 3710000.0 613.37 447.39 461.92 697.88 1118.7 461.53 564.82 560.42 984.29 776.14 605.63 True False 716.8918605432731 470.1602400428063 527.4272018389844 868.8606313290242 954.1407119329288 510.3687982611811 667.4404828514982 639.8612512142696 761.349886588145 600.8094349473595 455.23535646232597 1.5747719292154785 1.0327849833467746 1.1585813675318797 1.9085965512015952 2.095928399207918 1.1211097534851027 1.4661437723955297 1.4055614137414276 1.6724313605706331 1.3197776192435986 1.0 8.830468800608992 -10.911951978916012 1.106755513038456 0.9935612848948684 1.5003299882795207 0.11158048953778454 0.3212759853119794 0.6021796585976493 1.2824742863228424 0.23994767376261442 0.05402077089143678 1.224751615788107e-11 10.911951978916012 0.5067687033846523 EFGDQAEAAQDATLTTTTFQNEDEKNKEVYMT(ph)PLR ddPTM_A549_PD325901_60min_R1 3 EFGDQAEAAQDATLTTTTFQNEDEKNKEVYMTPLR 35 2 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 EFGDQAEAAQDATLTTTT(0.001)FQNEDEKNKEVYMT(0.998)PLR;EFGDQAEAAQDAT(0.003)LT(0.061)T(0.061)T(0.061)T(0.061)FQNEDEKNKEVY(0.284)MT(0.468)PLR;EFGDQAEAAQDATLT(0.002)T(0.014)T(0.121)T(0.121)FQNEDEKNKEVYMT(0.742)PLR 143.36 6.053799999999999e-40 25172700.0 2974.42 3539.59 3611.1 3161.93 4359.8 3490.79 3801.2 3986.98 3999.84 3865.7699999999995 4035.4700000000003 True False 3276.380928747727 3837.8836714921854 3856.170961308335 3357.235234835948 4053.5826884934836 3462.3621636077346 3945.856746096455 3907.4565561746954 3831.7406346182825 3621.6846224635656 3539.1327729520135 0.9257581274677289 1.0844135887818025 1.0895807557092236 0.9486039236769455 1.145360445212222 0.9783080731158204 1.1149219312292684 1.104071761884045 1.0826778424088912 1.0233254457539593 1.0 11.789180171117604 -5.2514895014370095 23.855054991572825 1.0510129607559973 0.9257579948452704 0.28432553664318083 0.05919867721259995 730.6022467053211 1751566.833679392 0.007825151249633771 0.13947937594021156 5.604159646032973e-06 5.2514895014370095 -0.12525496591072682 EFGSLPTT(ph)PSEQR ddPTM_A549_MK2206_60min_R1 2 EFGSLPTTPSEQR 13 0 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 EFGSLPT(0.004)T(0.973)PS(0.023)EQR;EFGS(0.001)LPT(0.241)T(0.758)PSEQR 125.36 2.9858999999999997e-06 11506100.0 2613.8999999999996 2436.8 2238.33 2755.2 3928.8999999999996 2534.15 2677.1000000000004 2387.7 3897.0 4037.7 3684.9 True False 3055.062416280647 2560.822711585667 2555.7588515159623 3430.2241236856285 3350.9640145823596 2802.312070967373 3163.4944170563117 2726.1637870245754 3014.335722230235 3125.5807656955626 2769.8376319337326 1.1029752722898012 0.9245389267810099 0.9227107112887648 1.2384206511378986 1.2098052159984987 1.0117243114395007 1.142122693613543 0.9842323447390428 1.0882716327764703 1.128434652508303 1.0 11.435585692535946 -10.919190571480925 0.8823587224027609 0.9945405323441434 1.069738650966452 0.0 0.1062153668019636 1.92691634953891 2.321858067261414 0.10329597553974525 0.018178865200182876 1.204507278103148e-11 10.919190571480925 0.07519811862230852 EFGSLPTT(ph)PSEQR ddPTM_A549_PD325901_60min_R1 2 EFGSLPTTPSEQR 13 0 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 EFGSLPT(0.001)T(0.994)PS(0.005)EQR;EFGSLPT(0.004)T(0.995)PS(0.001)EQR 184.31 3.8402000000000002e-25 19247200.0 6694.3 6227.5 5499.0 6800.4 7027.9 7035.8 6826.4 6694.8 7027.0 7141.6 8148.6 True False 7373.900407916804 6752.313280413147 5872.195208173284 7220.445263171032 6534.2845489387955 6978.502777512059 7086.182387549408 6561.266962031003 6731.679627050747 6690.678157206919 7146.373858231327 1.0318380418096107 0.9448586673975511 0.8217027718763383 1.0103648936382454 0.9143496657976387 0.9765096139595452 0.9915773409177874 0.9181253447122155 0.941971377455585 0.9362339964205023 1.0 12.802995674279064 -10.720286366973243 0.8423676299115608 1.0020885983380199 0.9477494545614423 0.0 0.05681791991627038 1.1980634550172293 1.4198317722449603 0.04239432688687151 0.009494736843143245 1.9042047011807653e-11 10.720286366973243 -0.05433914377657756 EFGYDS(ph)PHDLDS(ph)D ddPTM_A549_PD325901_60min_R1 1 EFGYDSPHDLDSD 13 0 Q96CW6 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 2 EFGYDS(1)PHDLDS(1)D 52.265 0.028142 3072700.0 420.82 448.44 322.66 400.89 433.2 251.68 351.55 420.33 485.89 244.2 422.19 True False 463.5413366086897 486.23161260031674 344.55764791220065 425.6520648127517 402.773526458869 249.63040152423807 364.9284276255416 411.94618840749416 465.46973302799057 228.78117032456728 370.26330648291525 1.2519235054961582 1.313204965458149 0.93057465290069 1.1495928906808706 1.08780297536033 0.674196975918154 0.9855916620308693 1.1125763239153224 1.2571316813686704 0.617887774237558 1.0 8.532407773639843 -5.740270613378876 24.970833370323195 1.074318952201971 1.282564410386478 0.1348379176078861 0.2011546576711521 303.7556370022732 358306.73855479487 0.022901610261218924 0.08851872761637705 1.8185673373945994e-06 5.740270613378876 0.20824545818450702 EFGYDS(ph)PHDLDSD ddPTM_A549_MK2206_60min_R1 1 EFGYDSPHDLDSD 13 0 Q96CW6 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 1 EFGYDS(0.821)PHDLDS(0.179)D 45.915 0.042988 878070.0 335.26 200.17 332.67 272.29 463.96 352.27 256.79 255.14 399.96 417.83 432.29 True False 391.8436916799612 210.35779800480253 379.84760832130024 339.0010622235628 395.7120986040954 389.54697758209926 303.44541905640074 291.3068763334799 309.36969860487676 323.4419128044623 324.9404624029505 1.2058938083064756 0.6473733571042412 1.1689760195215724 1.0432713110476717 1.2177987797450192 1.1988257008726473 0.9338492867659728 0.8964930811609345 0.9520811791707096 0.9953882333169394 1.0 8.34403159264013 -7.822475794794627 24.99997427806243 0.9664767898985641 1.0692689170776637 0.13927084755550545 0.15203322491753488 127.98398809818411 52420.20898875969 0.023010687714628903 0.03179384058636679 1.5049573945808307e-08 7.822475794794627 0.10279212717909958 EFGYDS(ph)PHDLDSD ddPTM_A549_PD325901_60min_R1 2 EFGYDSPHDLDSD 13 0 Q96CW6 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 1 EFGYDS(1)PHDLDSD;EFGYDS(0.998)PHDLDS(0.002)D 64.55 0.005917100000000001 1328700.0 1085.37 848.73 682.81 626.8800000000001 862.88 793.0699999999999 782.76 872.71 976.9200000000001 983.6 857.9 True False 1195.5559633928358 920.2554557181937 729.1495926700849 665.600953852223 802.2742855743971 786.6115008615205 812.5483601427076 855.3031144222495 935.8634497308125 921.4953281377739 752.3837386761719 1.5890241932878968 1.2231198102944039 0.9691192873905439 0.8846562194756572 1.0663099749949516 1.0454924268373647 1.079965339990463 1.1367910687798295 1.2438645356390547 1.2247677358885452 1.0 9.555324857901162 -5.327476650752358 3.1453513040402084 1.0859574146756106 1.629720727049656 0.6859342199568788 0.10109318522604883 0.14950285187117462 2.3332232136919684 0.01621355437608138 0.1811475678541305 4.7046069872077415e-06 5.327476650752358 0.5437633123740455 EFHLNES(ph)GDPSSK ddPTM_A549_MK2206_60min_R1 1 EFHLNESGDPSSK 13 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 1 EFHLNES(1)GDPSSK 101.96 4.2303999999999993e-05 11633000.0 1391.3 1356.6 1268.0 1370.4 1631.9 1321.4 1273.9 1248.1 2384.5 2099.0 2543.9 True False 1626.1174259808195 1425.6451454929058 1447.8214667731045 1706.1480615195933 1391.849671764858 1461.229670925669 1505.3511403713107 1425.0219971459437 1844.4145572640484 1624.8344421811887 1912.179421931726 0.8504000238314874 0.7455603428953793 0.7571577489891002 0.8922531232953049 0.7278865444325201 0.7641697500590726 0.7872436671505291 0.7452344590688854 0.9645614507245246 0.8497290701621216 1.0 10.901002184019767 -8.80662625584528 6.57890407307854 0.9839540023822407 0.782823688680251 0.5216405052191766 0.061758689758294176 0.057827478890939026 6.077653149290835 0.007838300743998581 0.008366464384557536 1.5608951966262057e-09 8.80662625584528 -0.20113031370198975 EFHLNES(ph)GDPSSK ddPTM_A549_PD325901_60min_R1 1 EFHLNESGDPSSK 13 0 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 1 EFHLNES(1)GDPSSK 109.38 1.9622999999999998e-05 15948000.0 2081.9 2182.2 1984.8 2465.7 3127.2 2817.8 2204.9 2306.1 2386.5 2845.1 3076.1 True False 2293.2529553862246 2366.101652431565 2119.500463571982 2618.0006889890024 2907.5562602543296 2794.852771038613 2288.8086760675765 2260.1030263995485 2286.203704277302 2665.4599004521974 2697.759201004514 0.8500584316540664 0.8770618413795213 0.7856522045343347 0.970435273842894 1.0777671554865598 1.0359904508889992 0.8484110350602587 0.8377704820941752 0.8474454293126056 0.9880273596915952 1.0 11.397545865335063 EFITGDVEPTDAESEWHS(ph)ENEEEEK ddPTM_A549_MK2206_60min_R1 2 EFITGDVEPTDAESEWHSENEEEEK 25 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPTDAES(0.004)EWHS(0.996)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK 169.7 3.0979e-48 51411000.0 1587.1100000000001 2080.05 1636.22 1300.67 2757.05 2958.2 1880.56 2321.18 3432.3 3482.4 3388.7 True False 1854.975366885948 2185.915660388117 1868.2605996557477 1619.3342083892946 2351.4915972420513 3271.234760505765 2222.233409637078 2650.2143733156186 2654.889530256823 2695.7234213681622 2547.192266637857 0.7282431684414643 0.8581667308818413 0.7334588064377807 0.6357330106559722 0.9231700441466404 1.2842512139154698 0.8724246845214768 1.0404453593971312 1.0422807752008136 1.0583117170524226 1.0 11.314692145591843 -6.970268788624683 7.928409027267396 1.0294217017517355 0.7501418597184218 0.6613374464784818 0.10318868933030843 0.09959892263631305 21.95998938054743 0.013818040325556124 0.026049645888296006 1.0708563378177283e-07 6.970268788624683 -0.2792798420333137 EFITGDVEPTDAESEWHS(ph)ENEEEEK ddPTM_A549_PD325901_60min_R1 2 EFITGDVEPTDAESEWHSENEEEEK 25 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK 338.12 9.967599999999997e-233 127242000.0 11516.1 13476.400000000001 11925.3 10952.2 13525.6 13318.0 11463.1 12221.8 13990.0 15070.0 20314.7 True False 12685.205994295255 14612.103523429922 12734.622570654454 11628.69251974911 12575.608516786886 13209.542623568834 11899.334543349003 11978.026611183377 13402.048951535502 14118.477628137718 17816.120685493446 0.7120071882216213 0.8201619073745747 0.7147808883571081 0.6527062049606358 0.7058555977916348 0.7414376483385936 0.6678970553358391 0.672313957826764 0.7522428248057363 0.792455208256055 1.0 14.120895615563564 -10.306461002673894 0.6847763781852145 1.0043938075502543 0.7116078477020491 0.38307031043058826 0.0734331459543373 0.220032450417956 0.1878247840771758 0.03409550812689193 0.010214670117295628 4.937862556288273e-11 10.306461002673894 -0.2927859598482052 EFITGDVEPTDAESEWHS(ph)ENEEEEKLAGDMK ddPTM_A549_MK2206_60min_R1 3 EFITGDVEPTDAESEWHSENEEEEKLAGDMK 31 1 E9PNJ7;C9J6D1;Q99733;Q99733-2;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAES(0.001)EWHS(0.999)ENEEEEKLAGDMK;EFITGDVEPT(0.001)DAES(0.016)EWHS(0.983)ENEEEEKLAGDMK 284.48 9.257499999999997e-169 69435000.0 4318.0 6110.8 4303.67 4589.55 7727.0 4550.63 4800.799999999999 4759.74 9271.8 9712.6 10594.7 True False 5046.772835035707 6421.81361866287 4913.99511980079 5713.9899560327285 6590.368535895005 5032.174646136279 5673.043217438255 5434.447721092408 7171.752104022142 7518.516914306344 7963.743591155338 0.633718649686403 0.8063812634293047 0.6170458734078722 0.7175004934084992 0.8275465502448339 0.6318855684561584 0.7123588488884585 0.6823986306048317 0.9005503532267418 0.9440932933421575 1.0 12.95923105598121 -8.901181373530388 2.6420761147230536 0.9608871425046783 0.7057643218919215 0.7298988741025758 0.06642307021229513 0.09323792272729113 1.262097406219558 0.012231281516717523 0.012706121592733627 1.2555055199479195e-09 8.901181373530388 -0.2551228206127568 EFITGDVEPTDAESEWHS(ph)ENEEEEKLAGDMK ddPTM_A549_PD325901_60min_R1 5 EFITGDVEPTDAESEWHSENEEEEKLAGDMK 31 1 E9PNJ7;C9J6D1;Q99733;Q99733-2;A8MXH2;E9PKT8;C9JZI7 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPT(0.001)DAES(0.018)EWHS(0.981)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK 181.44 3.792e-67 356420800.0 7294.9 7444.620000000001 6520.84 7010.99 9607.25 9532.78 6976.24 10597.34 9625.3 8821.76 11908.54 True False 8035.472877778453 8072.0042542961655 6963.383415396379 7444.0429291864375 8932.469903213227 9455.148200263131 7241.7246307450105 10385.967740247597 9220.782113882397 8264.752568069016 10443.86507445477 0.769396465819236 0.7728943448379019 0.6667439080985932 0.7127670528216834 0.8552839240581201 0.90533036695294 0.6933950773127036 0.9944563306980299 0.8828898159969549 0.791349994388977 1.0 13.350368104083008 -8.150489457911954 0.27637941655237214 1.0116568946487459 0.6880997744087886 0.22905849771947784 0.09613898735353005 0.9197830878261458 0.20757999645239483 0.06989373680331724 0.10648195697726247 7.071483658311388e-09 8.150489457911954 -0.3235571202399573 EFKENKEPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 EFKENKEPSPK 11 2 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 EFKENKEPS(1)PK 44.196000000000005 0.012084000000000001 14284000.0 4678.6 5324.8 4496.6 3715.7 5860.4 4337.5 3883.9 3852.9 6736.1 6943.8 5992.0 True False 5468.233299212153 5595.8095759403095 5134.2854948674585 4626.046666804109 4998.3429232249355 4796.491371000525 4589.5543559840935 4399.060374011384 5210.384105341315 5375.190757321454 4504.02102921298 1.2140781012666935 1.2424030748626647 1.1399337306745678 1.0270925994349658 1.1097512402375111 1.0649353854901185 1.0189904368155358 0.976696233316669 1.1568294356413704 1.193420439748857 1.0 12.136997848019496 -5.971011283111341 3.5167499953012245 1.0641704316194662 1.2271985852325773 0.4915721815332573 0.06270693300875324 0.140140340446614 3.653285459175768 0.008903645535440098 0.02996849123637991 1.0690271051913371e-06 5.971011283111341 0.16302815361311107 EFKENKEPS(ph)PK ddPTM_A549_PD325901_60min_R1 3 EFKENKEPSPK 11 2 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 EFKENKEPS(1)PK;EFKENKEPS(1)PK;EFKENKEPS(1)PK 50.843 0.0083292 108698800.0 10624.8 10583.0 11124.3 10458.9 11856.7 11685.3 11899.2 12954.6 12299.900000000001 12130.400000000001 12514.7 True False 11703.421874435635 11474.866551041727 11879.261893850158 11104.922499114682 11023.926295394447 11590.138791048867 12352.030567492082 12696.210340312904 11782.97797705443 11364.48447381299 10975.471237219597 1.0663252284555618 1.0455010361767976 1.082346410199287 1.0117945971609943 1.004414849907358 1.0560037505947655 1.1254214329863441 1.1567804302796587 1.0735737648417725 1.035443875546244 1.0 13.421995263456298 -10.567878064917343 1.0763064911086273 1.00334986517511 1.0682257982478915 0.16121910012825758 0.04296796888943256 0.5578484304083898 1.2306340945065506 0.024035780250026013 0.008179382124288643 2.7047176500081534e-11 10.567878064917343 0.0648759330727815 EFLEQLPKDDHDDFFS(ph)TTPLQHQR ddPTM_A549_PD325901_60min_R1 1 EFLEQLPKDDHDDFFSTTPLQHQR 24 1 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 EFLEQLPKDDHDDFFS(0.333)T(0.333)T(0.333)PLQHQR 80.67 6.3802e-05 3619600.0 199.92 274.46 284.66 238.04 268.84 399.4 205.81 377.89 319.63 219.17 446.96 True False 220.21573122667465 297.58970741745384 303.97873939963773 252.74319017193588 249.95760584765074 396.14741882064794 213.6422121735534 370.35268750102983 306.19706264326607 205.33156879621373 391.9867535128827 0.5617938087273585 0.7591830712403743 0.7754821729955409 0.6447748244217887 0.6376685018246053 1.0106143007907245 0.5450240607850847 0.9448091910811424 0.7811413520972537 0.5238227234876841 1.0 8.614661091655579 -14.999999992190567 0.1047459624543966 1.865914115420235 0.5685279288009352 0.0 0.19051096023023634 69.3750941687347 0.5189286336279554 12.981463629173021 0.7006773876196946 1.0000000179818844e-15 14.999999992190567 -1.2973861866193 EFNAEVHR ddPTM_A549_MK2206_60min_R1 2 EFNAEVHR 8 0 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 ; 141.48 0.0011316 11720000.0 676.36 684.25 761.3900000000001 675.69 695.8199999999999 747.65 632.75 872.4599999999999 1066.52 923.9000000000001 1035.87 False True 790.5130325856302 719.0754023319486 869.3665509356259 841.2340803328768 593.4657997471801 826.7658267500965 747.7124845513362 996.1338767966917 824.9549228824716 715.1903483235827 778.6348904423988 1.0152550859061589 0.9235078098329113 1.1165265795393216 1.080396076079908 0.7621875246432757 1.0618145126791723 0.9602863854797292 1.2793337275583887 1.0594887706788414 0.918518238910706 1.0 9.60480318272659 EFNAEVHR ddPTM_A549_PD325901_60min_R1 2 EFNAEVHR 8 0 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 ; 124.98 0.0011893 16865500.0 1364.67 1177.22 1333.46 1208.17 1446.98 1193.63 1535.17 1266.17 1425.77 1496.57 1505.97 False True 1503.210293783043 1276.4284608539488 1423.956614346381 1282.795916946849 1345.349116610006 1183.9094730267657 1593.591734427258 1240.9152460588505 1365.8498451487335 1402.0763147937653 1320.745237130382 1.1381531059306393 0.966445628550801 1.0781463179380824 0.9712667370537057 1.0186287853159943 0.896395034972132 1.2065852593113995 0.9395568586376428 1.0341508769067012 1.0615796865109983 1.0 10.367136491916916 -5.24591993754525 23.28549444127316 1.0149432612707452 1.138153344299732 0.16386899744603245 0.07833408038309357 1283.8029390932504 1926144.6004238562 0.009054302262651104 0.2720877282971868 5.676492422501262e-06 5.24591993754525 0.12321008302898684 EFPGFLENQKDPLAVDK ddPTM_A549_MK2206_60min_R1 2 EFPGFLENQKDPLAVDK 17 1 P60903 P60903 S100A10 Protein S100-A10 0 ; 198.42 3.9226999999999994e-48 24160000.0 14619.0 16841.8 17063.8 15294.5 22566.0 16944.7 15539.9 17048.1 23104.2 22149.2 23151.9 False True 17086.329799765415 17698.975682855995 19483.703426437616 19041.653186596188 19246.57129299943 18737.776907018473 18363.298678276256 19464.720382616597 17871.135589825986 17145.68033671252 17402.6442700661 0.9818237696874165 1.0170279532346478 1.1195829279778533 1.0941816020079955 1.1059567152162633 1.0767201016255274 1.0552016344931303 1.1184921142183795 1.026920697365844 0.9852342018048615 1.0 14.087018914673342 -8.94434767617354 7.636215957414904 1.0117591414003753 1.0726602714534244 0.3486319905926063 0.04088679231864695 0.2083244281886703 24.045720428774157 0.007272808604532687 0.00768058734368877 1.1367169182262163e-09 8.94434767617354 0.06090113005304909 EFPGFLENQKDPLAVDK ddPTM_A549_PD325901_60min_R1 2 EFPGFLENQKDPLAVDK 17 1 P60903 P60903 S100A10 Protein S100-A10 0 ; 188.41 1.8429e-39 50288000.0 13095.0 13019.0 12585.5 13285.9 16448.6 14232.7 15423.2 17029.0 18157.9 18609.9 20816.3 False True 14424.39475997051 14116.15682018448 13439.627712759571 14106.539868531861 15293.307080589464 14116.793610036651 16010.13831589887 16689.343236007942 17394.78660879817 17434.86773801459 18256.027065397826 0.7901168588487838 0.7732326847247073 0.7361748350073835 0.7727059024397025 0.8377127742966676 0.7732675657998662 0.8769782307260172 0.9141826519111954 0.9528243218793186 0.9550198230731346 1.0 14.156085215151865 -8.170696955012712 0.7442295659382892 0.9877411405342971 0.7659351909806292 0.907291853468249 0.0264968475376701 0.10043509642177084 0.11248604006709789 0.005558699198040275 0.007993702127932698 6.749988687535044e-09 8.170696955012712 -0.22180594955366784 EFS(ph)GGSYSAK ddPTM_A549_PD325901_60min_R1 2 EFSGGSYSAK 10 0 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6;H0Y7V8 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 EFS(0.996)GGS(0.002)YS(0.001)AK;EFS(0.998)GGS(0.002)YSAK 121.08 4.6448e-05 30749000.0 20221.0 21503.0 19812.3 20941.0 23756.0 22858.0 21206.0 21712.0 23047.0 21499.0 25097.0 True False 22273.821034086588 23315.133274785054 21156.881819038277 22234.478009538343 22087.460513750902 22671.852026545734 22013.005934368455 21278.93712726551 22078.41473810142 20141.549470957703 22010.228102990895 1.0119759290936141 1.059286308423893 0.9612295574603037 1.010188440823881 1.0035089327742819 1.0300598394736733 1.0001262063875287 0.9667749478877045 1.0030979522243688 0.9150995335764256 1.0 14.425886476225923 -7.968360655453928 24.97191294101909 0.9981664022361043 1.0122144338001189 0.08631626289747618 0.03454487874280986 416.0752279063331 328393.17244431464 0.003589332397614848 0.004959367503274891 1.0755716450745307e-08 7.968360655453928 0.014048031564014574 EFS(ph)IPR ddPTM_A549_MK2206_60min_R1 3 EFSIPR 6 0 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 EFS(1)IPR;EFS(1)IPR;EFS(1)IPR 69.19800000000001 0.052422 462357000.0 10378.48 11565.880000000001 10417.380000000001 9172.23 16032.499999999998 11312.29 9285.310000000001 12750.599999999999 15556.600000000002 13898.899999999998 14852.6 True False 12130.113694525568 12154.533890132318 11894.721128969082 11419.42676175705 13674.140488124318 12509.349019309639 10972.330636000579 14558.036597074804 12033.054938785446 10759.12883679472 11164.289509093585 1.0865101343569865 1.0886974831879945 1.065425714666441 1.0228529771156192 1.2248106318800134 1.1204787379546606 0.9828059928993554 1.3039823613689818 1.0778164547761173 0.963709229148093 1.0 13.446603821097424 -9.85723957471382 1.2197742240367462 1.0137583074724905 1.1075850710792592 0.22474239696381937 0.08620915337366152 0.4999700875663157 1.5036710486839344 0.024121863308006763 0.01535021883635865 1.3891860875729462e-10 9.85723957471382 0.09382676360676867 EFS(ph)IPR ddPTM_A549_PD325901_60min_R1 1 EFSIPR 6 0 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 EFS(1)IPR 75.854 0.045549 404430000.0 5785.3 6615.7 6886.8 5976.4 7474.4 5989.6 6757.5 7295.1 5769.7 6338.5 6646.3 True False 6372.6193970872355 7173.228256801172 7354.179661692628 6345.548654610812 6949.423929280172 5940.822683445549 7014.660360345887 7149.593507604757 5527.219573672221 5938.286028264822 5828.8472343669955 1.0932898291645299 1.2306426928651828 1.2616868080419474 1.0886455587988884 1.1922467084582753 1.0192105650699412 1.2034387037950343 1.2265879032565163 0.9482526049205111 1.0187753752152866 1.0 12.508994875857155 -8.76784741117556 24.99974160399493 0.9755637182062835 1.1647705810243398 0.5473180501464517 0.07077877046643974 72.03205726039725 281018.78422083345 0.01190254783448199 0.012819295110780142 1.706681924238992e-09 8.76784741117556 0.18920686281805632 EFS(ph)LKR ddPTM_A549_MK2206_60min_R1 2 EFSLKR 6 1 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 EFS(1)LKR;EFS(1)LKR 64.836 0.024301 18807700.0 4202.8 3868.4 3198.3 3184.5 4827.1 3851.3999999999996 3379.1 3820.5 5387.9 4935.1 5160.0 True False 4912.129891405296 4065.2850367276724 3651.8670324766717 3964.7026429576376 4117.039984420704 4258.952591647588 3993.0387302211298 4362.067574790545 4167.549252708312 3820.257482424193 3878.6295912448227 1.2664601699768854 1.0481240709100412 0.9415353919642084 1.0221916142513598 1.0614676878952407 1.098056025061342 1.0294973098835118 1.1246414415640464 1.0744901400524722 0.9849503265399737 1.0 11.921331289871361 -10.634244492986701 0.9529666461101458 1.0007375907238703 1.0680879284089206 0.13768031670140923 0.07628051337490796 1.0728357971905642 1.7658161643214176 0.047738599651442434 0.013480698634221876 2.3214295427350757e-11 10.634244492986701 0.06735033768505039 EFS(ph)LKR ddPTM_A549_PD325901_60min_R1 2 EFSLKR 6 1 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 EFS(1)LKR;EFS(1)LKR 60.681999999999995 0.026563999999999997 17285300.0 4048.9 3868.6 4159.7 4287.8 4222.4 4146.0 4363.8 3861.8 4203.1 4610.0 4729.6 True False 4459.941347357358 4194.620498852879 4442.002256308132 4552.647667699661 3925.833190489215 4112.236350601919 4529.866796962986 3784.7733694765093 4026.4583236739745 4318.923813252478 4147.889183404623 1.0752315575838505 1.011266288317254 1.0709066852798848 1.097581797969542 0.9464653024473663 0.9914045840604065 1.0920896380468952 0.9124576868203444 0.9707246615419517 1.0412341367585594 1.0 12.018161635735064 -6.760064459032139 24.99999915713812 0.9864662972220191 1.0605094252863494 0.3205992432079995 0.04844172807086627 29.46386689708512 535716.3708145149 0.006341877885296855 0.01265785710066258 1.737542919308576e-07 6.760064459032139 0.07404312806433033 EFS(ph)PFGTITSAK ddPTM_A549_PD325901_60min_R1 1 EFSPFGTITSAK 12 0 P11940-2;E7EQV3;A0A087WTT1;P11940;E7ERJ7;H0YAR2;H0YAP2;H0YB86 P11940-2 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein 1 EFS(0.988)PFGT(0.011)ITSAK 60.448 0.0087087 1156500.0 1018.7 1221.4 1425.7 1486.1 1576.8 1850.9 1217.3 1387.9 1859.0 1396.1 1531.2 True False 1122.117674072697 1324.3316645036725 1522.4565754305593 1577.8930218220216 1466.0510076646929 1835.8268840639385 1263.6250176321194 1360.2172457135134 1780.8726948466403 1307.9500077400828 1342.87210707653 0.8356102328430801 0.986193441300065 1.1337316244843223 1.1750136245343115 1.0917279463465264 1.3670898921719246 0.9409868676050367 1.0129164486666897 1.3261670158029046 0.9739944711395685 1.0 10.391106196074938 -5.4964509912014945 2.1293336844168587 1.1444897322817864 0.8174171602701609 0.26255776776055373 0.13327214510384772 0.40906306577060464 2.8667190615681464 0.02022022110337035 0.21038272747869727 3.1882253368343383e-06 5.4964509912014945 -0.32707257201162554 EFSGGSYS(ph)AK ddPTM_A549_MK2206_60min_R1 1 EFSGGSYSAK 10 0 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6;H0Y7V8 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 EFSGGS(0.389)YS(0.611)AK 117.25 7.485e-05 15574000.0 5744.2 7574.5 6285.5 5225.3 7779.9 5769.3 4823.2 6097.2 8280.2 8138.4 10188.0 True False 6713.680527793454 7960.009696694696 7176.878414355166 6505.498734572629 6635.487015971212 6379.803496648609 5699.513007487955 6961.496771891873 6404.747920762335 6299.929787635722 7658.0384255043155 0.876684100387147 1.0394319347085927 0.9371692874317925 0.8494993591187436 0.8664734553789126 0.8330858559551392 0.7442523386284285 0.9090443773052012 0.8363431423159193 0.8226558078703874 1.0 12.90275918383494 -4.9371261562629565 16.21572946934443 0.9037376251463533 0.5938143484860109 0.0 0.08240649942403148 116508818.59157695 611510657.1754534 0.0124939944928562 1205548176.2256572 1.1557764570868596e-05 4.9371261562629565 -0.30992327666034236 EFSGNPIK ddPTM_A549_PD325901_60min_R1 1 EFSGNPIK 8 0 H3BPE7;P35637-2;P35637 H3BPE7 FUS RNA-binding protein FUS 0 88.819 0.007412 1589200.0 2299.4 2228.2 2263.3 2317.0 2568.9 2496.2 2384.7 2413.2 2657.2 2122.7 2802.7 False True 2532.8333952711855 2415.9782338685795 2416.9011483285317 2460.1158277112045 2388.4693262238893 2475.8717748124714 2475.4510634579105 2365.066832881224 2545.5271246619095 1988.672359737752 2457.98566777912 1.030450839674624 0.9829098133234863 0.9832852892556898 1.0008666282964982 0.9717181664374629 1.0072767336554538 1.007105572627106 0.9621971616368896 1.035615120962803 0.8090658891166727 1.0 11.2632607882147 -8.780770623407266 24.99944204772024 1.016818248053545 0.9930197510856242 0.0 0.06554825698941555 269.68210869085505 348755.4894966414 0.0035414835720002954 0.0037729985511771934 1.6566447044623923e-09 8.780770623407266 -0.0237984969679208 EFSGPST(ph)PTGTLEFEGGEVSLEGGK ddPTM_A549_PD325901_60min_R1 1 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFS(0.001)GPS(0.117)T(0.682)PT(0.169)GT(0.032)LEFEGGEVSLEGGK 117.73 6.3388e-17 17497000.0 1460.4 1545.2 1381.4 1620.9 1350.2 1402.0 1234.5 1427.2 1413.6 1594.3 1623.3 True False 1608.6587329103418 1675.4194268798722 1475.1501110330184 1721.0193116690082 1255.3666099371303 1390.5825768316188 1281.4795730443207 1398.73337638326 1354.1913079264177 1493.6356259150605 1423.644390946532 1.129958255825951 1.1768524763167463 1.036178782014687 1.2088828661241462 0.8817978828986082 0.9767766344424456 0.9001402184377724 0.9825019402867106 0.9512145845818019 1.0491634255110531 1.0 10.47537310829252 -6.759726919289955 24.999999962908777 0.9654794485744372 1.1334748875638017 0.6767101561110431 0.05810203346278379 18.288359363111557 266981.64368519303 0.007162289973034556 0.014319790916463508 1.7388938868813969e-07 6.759726919289955 0.16799543898936442 EFSGPSTPT(ph)GTLEFEGGEVSLEGGK ddPTM_A549_MK2206_60min_R1 1 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFSGPS(0.04)T(0.235)PT(0.689)GT(0.036)LEFEGGEVSLEGGK 124.79 1.567e-17 7297300.0 2060.0 2377.1 2520.0 1957.9 3805.5 2795.7 2478.6 2903.9 3354.3 2943.5 3338.5 True False 2407.67763783547 2498.084236584984 2877.3738929560127 2437.5855878934717 3245.7159911153653 3091.539118364532 2928.9295364819295 3315.5367178207744 2594.556405716419 2278.561305650465 2509.458312087374 0.95944117749968 0.9954675176520749 1.1466115532170789 0.9713592675169335 1.2933930703218457 1.231954762298076 1.167156083993935 1.321216097454475 1.0339109413450507 0.9079893037773366 1.0 11.293160264453725 -3.961639464828858 16.003563389800483 1.0734904983307874 1.0832302891153343 0.0 0.1391008883926162 0.0 0.0 0.018380736825380408 0.0 0.00010923467859334912 3.961639464828858 0.009739790784546898 EFSGPSTPTGT(ph)LEFEGGEVSLEGGK ddPTM_A549_MK2206_60min_R1 1 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFSGPS(0.007)T(0.041)PT(0.434)GT(0.518)LEFEGGEVSLEGGK 111.67 1.4393e-12 9084900.0 2952.1 2623.6 2879.4 2298.3 4466.4 2688.1 3138.5 3495.8 4444.5 3546.2 3417.0 True False 3450.342308084511 2757.1300336983554 3287.7422172133097 2861.383603174608 3809.398476604303 2972.5529577836323 3708.724824597974 3991.340355438501 3437.827846408078 2745.110957057138 2568.464595597589 1.3433482065505136 1.0734545605277737 1.2800418673664338 1.1140444014992807 1.483142295647643 1.1573268180837146 1.4439462513732209 1.55397912133177 1.3384758553030474 1.068775081331596 1.0 11.326690471990013 -10.628812609034956 1.0119174922974208 1.0079720221690347 1.3060975939584083 0.34382099379062125 0.14539280755151604 0.43101157951046937 0.8164395480385893 0.08626991939480853 0.025946139598538538 2.3506468677333793e-11 10.628812609034956 0.2981255717893736 EFSGPSTPTGT(ph)LEFEGGEVSLEGGK ddPTM_A549_PD325901_60min_R1 1 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFS(0.001)GPS(0.056)T(0.296)PT(0.297)GT(0.35)LEFEGGEVSLEGGK 96.54 8.1338e-09 16726000.0 1404.3 1160.3 1489.8 1273.1 1477.8 1416.3 1471.1 1777.9 1347.3 1568.0 1748.5 True False 1546.8635022089793 1258.0825530732047 1590.9067868951731 1351.7364955801186 1374.0044261332341 1404.766122372769 1527.083515516809 1742.4383897644325 1290.677666361957 1468.996212403445 1533.445584654723 1.008750175218821 0.8204285601412324 1.0374719538896375 0.8815027472164793 0.8960242475396417 0.9160847547707875 0.9958511282033222 1.1362896780955989 0.8416846866154507 0.9579708775477744 1.0 10.58256125717399 EFT(ph)GSPPSSATK ddPTM_A549_MK2206_60min_R1 1 EFTGSPPSSATK 12 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.729)GS(0.269)PPS(0.001)S(0.001)ATK 170.95 1.1802e-15 87937000.0 23447.0 27488.0 25623.0 23521.0 34206.0 29222.0 27226.0 26753.0 41352.0 36461.0 40529.0 True False 27404.280375887505 28887.02178925917 29256.726690163454 29283.64605589783 29174.3427124142 32314.252644006294 32172.611780947715 30545.319677626354 31985.838025574725 28224.434776735743 30464.53075650417 0.8995471026592687 0.948218176086359 0.960353761034614 0.9612373907858659 0.9576495021570449 1.0607172289074962 1.0560678593114017 1.0026519010506976 1.0499369998911194 0.9264687187315312 1.0 14.894842898323247 -7.145639987865629 5.573998995187099 1.0273330798297333 0.945935002547417 0.43698236645549193 0.03887395436595161 0.10654438621570954 4.53162882632903 0.004086908263418263 0.007149235799837748 7.150888594899289e-08 7.145639987865629 -0.0813980772823163 EFT(ph)GSPPSSATKK ddPTM_A549_MK2206_60min_R1 1 EFTGSPPSSATKK 13 1 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.498)GS(0.498)PPS(0.004)S(0.001)ATKK 118.31 8.584e-06 171710000.0 12609.0 15048.0 13588.0 12331.0 19231.0 14304.0 14422.0 13266.0 23343.0 23769.0 22043.0 True False 14737.090939547314 15813.878924795268 15514.982721224707 15352.095553559626 16402.14537515166 15817.639785773259 17042.290718608245 15146.496125421121 18055.84777111121 18399.56639171257 16569.114744149156 0.8894314009595014 0.9544190603411341 0.9363797016797967 0.9265489309850256 0.9899228551690454 0.9546460405411065 1.028557710038563 0.9141403363610366 1.0897291768401234 1.110473714246549 1.0 14.016208903753759 -7.661017815060339 0.7384641023364343 1.0378381637075786 0.9275000167328056 0.48168553545018555 0.04877992304102306 0.4349551851414221 0.47733671769085795 0.00995707481994325 0.019965173600154595 2.182640376587176e-08 7.661017815060339 -0.11033814697477307 EFTGS(ph)PPSSATK ddPTM_A549_MK2206_60min_R1 1 EFTGSPPSSATK 12 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.001)GS(0.998)PPS(0.001)SATK 227.95 2.6678000000000003e-40 105050000.0 19499.0 19081.0 19360.0 18565.0 27824.0 22732.0 22781.0 23631.0 29388.0 29936.0 30498.0 True False 22789.954495220318 20052.14139845949 22105.53911413824 23113.42583341453 23731.12645822992 25137.485151719622 26920.012817959665 26980.766616902332 22731.664922992615 23173.436808545048 22924.504898020274 0.994130717178037 0.8747033572878237 0.964275530157567 1.008241003949035 1.0351859969843582 1.096533393569187 1.1742898238244803 1.1769399922452568 0.9915880418841974 1.010858769322703 1.0 14.484602955730345 -6.255811960855908 2.651317806647751 1.033167444826768 0.9324256786533361 0.304688303804851 0.07102330919507 0.3545008443218086 4.901000865639541 0.01197075134684784 0.03494818093678983 5.548659046476348e-07 6.255811960855908 -0.10074176617343189 EFTGS(ph)PPSSATK ddPTM_A549_PD325901_60min_R1 2 EFTGSPPSSATK 12 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.011)GS(0.984)PPS(0.004)SATK;EFT(0.002)GS(0.996)PPSS(0.001)ATK 226.51 3.2392999999999996e-40 247770000.0 52524.0 51469.0 55308.0 49184.0 62201.0 52054.0 53318.0 54282.0 57272.0 58564.0 59190.0 True False 57856.197813874845 55806.47326047123 59061.533474022144 52221.983975031486 57832.21634180082 51630.0894824487 55347.04566672914 53199.30292659476 54865.057008744916 54866.25904540524 51910.005236324294 1.1145481020562424 1.0750619848025051 1.137767819616661 1.0060099924337684 1.114086120363795 0.9946076724014714 1.066211521550758 1.0248371712620878 1.0569264394978872 1.0569495956631554 1.0 15.663725012808351 -2.0000000000000595 0.10883043467293305 0.98323933055537 1.355853941403231 0.2781506097620736 0.039887604210710255 69.33982377507802 0.5102945741690508 0.17077934634742592 3.897592273568012 0.00999999999999863 2.0000000000000595 0.37261461084786085 EFTGS(ph)PPSSATKK ddPTM_A549_MK2206_60min_R1 3 EFTGSPPSSATKK 13 1 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.001)GS(0.986)PPS(0.012)S(0.001)ATKK;EFT(0.127)GS(0.866)PPS(0.006)S(0.001)ATKK;EFT(0.002)GS(0.378)PPS(0.221)S(0.221)AT(0.179)KK 145.94 7.179199999999999e-13 155791200.0 14624.11 17283.61 16287.71 14992.62 23602.7 17973.29 15676.47 13997.94 27747.899999999998 27838.8 28927.0 True False 17092.3022428379 18163.271924732904 18597.552194459753 18665.812573044277 20130.774096307618 19875.211618095684 18524.68167948554 15982.190861893352 21463.044954291083 21549.995745113716 21743.627555414547 0.7860832880473808 0.8353377042741853 0.8553104649655681 0.8584497929553692 0.9258240854707199 0.914070642878833 0.8519591145623983 0.7350287260560395 0.9870958697941092 0.991094778927419 1.0 14.408305029189103 -8.873642522734768 10.348563674143733 0.9942876384436902 0.8509559498630164 0.6310887701618171 0.05009733581480153 0.15150242162365318 13.277237951767361 0.008899863396945923 0.00946697271389459 1.3376961503990382e-09 8.873642522734768 -0.1433316885806738 EFTGS(ph)PPSSATKK ddPTM_A549_PD325901_60min_R1 3 EFTGSPPSSATKK 13 1 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.024)GS(0.893)PPS(0.074)S(0.009)ATKK;EFT(0.016)GS(0.972)PPS(0.009)S(0.002)ATKK;EFT(0.001)GS(0.86)PPS(0.058)S(0.058)AT(0.023)KK 135.23 9.426e-09 523629100.0 32531.42 33236.51 31752.98 32301.76 39667.33 41022.4 37019.88 40576.1 38737.3 40739.15 41747.71 True False 35833.985810034355 36037.467341242 33907.92816898018 34296.96635258038 36881.23358565948 40688.32717533338 38428.691791455625 39766.77785416532 37109.30599358942 38166.87311641315 36613.006330538105 0.9787228474637991 0.9842804771588489 0.926117015982332 0.936742698563216 1.007326010126015 1.1113080091813203 1.0495912694119056 1.0861380104970162 1.01355528302076 1.0424402949008589 1.0 15.160068619187184 -6.888551524438795 5.800504278373908 1.024663997960293 0.9567216527991768 0.5246790054585053 0.03763594143904024 0.18127684848000383 8.62672213553066 0.00623841360234755 0.011923732872200873 1.2925533439505982e-07 6.888551524438795 -0.06794234516111619 EFTLEFSR ddPTM_A549_PD325901_60min_R1 1 EFTLEFSR 8 0 P16615-4;P16615-5;P16615-2;P16615;P16615-3;H7C5W9;Q93084-7;O14983;Q93084-6;Q93084;Q93084-3;O14983-3;Q93084-2;Q93084-4;O14983-2;Q93084-5 P16615-4 ATP2A2;ATP2A3;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 0 73.248 0.014609 1296700.0 933.19 662.39 779.4 937.66 1140.6 754.74 731.13 799.12 842.69 953.14 986.17 False True 1027.9267618218316 718.2119299579069 832.29477091294 995.5771286196325 1060.4881908563855 748.5936476732498 758.9535522396876 783.1809247024877 807.2746698334131 892.9585777361096 864.8773418466959 1.1885231721147773 0.8304205639430589 0.9623269458485463 1.1511194483299387 1.2261717812979342 0.8655489182718606 0.8775273851193296 0.905539880406892 0.9333978713209333 1.0324684605905554 1.0 9.756351731937793 -7.299655436709978 24.999851309332726 0.9485432886844152 1.056642029629126 0.25810622422460316 0.11234351478677322 746.0109332007639 488017.2658635923 0.01700776313321386 0.027189101289216484 5.01585026490597e-08 7.299655436709978 0.10809874094471073 EFVDYLK ddPTM_A549_MK2206_60min_R1 1 EFVDYLK 7 0 A0A2R8Y617;A0A2R8Y4Z7;A0A2U3TZH1;A0A2R8YFW4;A0A2R8YDQ1;A0A2R8Y4Y7;A0A2R8Y7B8;A0A2R8Y726;A0A2R8Y6K2;A0A2R8Y7E2;A0A2R8YFJ7;A0A2R8Y729;A0A2R8Y6E8;A0A2R8Y632;A0A2R8Y7N2;A0A2R8YFF4;A0A2R8Y4M0;A0A2R8YG79;A0A2R8Y6Z7;A0A2R8Y4M8;A0A2R8Y3M4;Q9UQ90-2;Q9UQ90 A0A2R8Y617 SPG7 Paraplegin 0 60.151 0.037122 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EFVISDR ddPTM_A549_MK2206_60min_R1 1 EFVISDR 7 0 H3BT58;Q14019 H3BT58 COTL1 Coactosin-like protein 0 77.282 0.047912 2260700.0 680.04 988.25 910.17 686.5 863.53 734.39 580.01 783.11 987.93 989.21 1113.9 False True 794.8141266182688 1038.5477038429644 1039.2457921237199 854.6925308181558 736.5058809112735 812.1026623513719 685.3903092289539 894.1182406737925 764.1654324000298 765.7467739638181 837.2878879239554 0.9492722133948459 1.2403711063085245 1.241204855716373 1.0207869278240187 0.8796327900280875 0.9699204706817987 0.8185838098391348 1.0678743280172691 0.9126674868004697 0.9145561341660841 1.0 9.70957994524928 -6.472324145625226 5.906650983192368 0.9516188139448936 1.1515862504414458 0.4705466204567964 0.09481693985885423 0.13435756248059924 10.938193922665473 0.01252423333153612 0.029047632264791245 3.3703566048073507e-07 6.472324145625226 0.19996743649655224 EFVISDR ddPTM_A549_PD325901_60min_R1 2 EFVISDR 7 0 H3BT58;Q14019 H3BT58 COTL1 Coactosin-like protein 0 ; 98.523 0.031865 7110800.0 3338.2 3469.6000000000004 3002.9 2824.3 3757.0 2844.7 3091.3999999999996 3340.4 3897.8 3297.1 4055.9 False True 3677.091606547044 3761.99536856226 3206.6948519046264 2998.7505965493137 3493.1212809463777 2821.5337063572797 3209.0449186789897 3273.773101506894 3733.989020964623 3088.9205433133925 3557.0500124684568 1.0337475137144003 1.0576166641951652 0.9015040105323969 0.8430442602824961 0.9820275983475096 0.7932229506099193 0.9021646891189015 0.9203618419846227 1.049743188281285 0.868393902949315 1.0 11.796465543636769 -8.753945578897557 24.862474427083665 1.0234898395846357 0.9260216147631603 0.0 0.08690516684756494 162.98694750809378 540747.7596215765 0.01299734561438257 0.014593856057770466 1.7621968520885095e-09 8.753945578897557 -0.09746822482147544 EFVISDRK ddPTM_A549_PD325901_60min_R1 2 EFVISDRK 8 1 H3BT58;Q14019 H3BT58 COTL1 Coactosin-like protein 0 ; 63.565 0.0099324 7160200.0 2967.7 2434.0 2623.1 2906.9 2803.1000000000004 2767.7 3175.0 3539.3 2789.1000000000004 3193.8999999999996 3392.6 False True 3268.9787192947283 2639.1217221237443 2801.119339981694 3086.452610951104 2606.219926170029 2745.1607688280105 3295.826362426665 3468.705884972862 2671.883826356518 2992.236608925617 2975.3317074633214 1.0986938737266916 0.887000839437086 0.9414477494913817 1.0373474000257004 0.8759426451956894 0.9226402427474052 1.107717285491031 1.1658215708426596 0.8980120837130076 1.0056816863208533 1.0 11.538834802170209 -11.68725106575463 0.003273270389869923 0.593997987202237 1.3453607388343836 0.0 0.09668525408037719 802049.5953932436 418.7030905781923 49178.46267284099 46952.22847133352 2.054702428560946e-12 11.68725106575463 0.7513627516321466 EFVS(ph)SDESSSGENK ddPTM_A549_MK2206_60min_R1 1 EFVSSDESSSGENK 14 0 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 EFVS(0.979)S(0.021)DESSSGENK 151.56 1.2449e-13 5838900.0 2326.8 2628.2 2244.4 2833.8 3659.2 2808.3 2837.0 2912.2 3383.9 3745.8 3974.9 True False 2719.5069552017353 2761.9641540501657 2562.689668789871 3528.0811272141145 3120.9365273129283 3105.472442001331 3352.4461772771874 3325.013268238458 2617.4520529779043 2899.621178428918 2987.8226283409026 0.9101969204617212 0.924407000553392 0.8577114466171969 1.180820137630864 1.0445521423224318 1.0393764383951258 1.122036544431272 1.1128549722795267 0.876039972436831 0.970479690100961 1.0 11.544878789948422 -4.094442471352522 17.27694309697687 0.9797991910595489 0.9981852004728767 0.0 0.10451890176233185 0.0 0.0 0.014940463190768211 0.0 8.045583169942502e-05 4.094442471352522 0.018386009413327797 EFVSPSLT(ph)PPPAIAHPALPTIPER ddPTM_A549_MK2206_60min_R1 1 EFVSPSLTPPPAIAHPALPTIPER 24 0 O94763-2;O94763-3;O94763 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 EFVS(0.012)PS(0.012)LT(0.975)PPPAIAHPALPTIPER 120.93 4.7531e-16 5257700.0 515.85 835.74 748.19 678.1 1084.1 935.74 858.96 1122.6 1541.1 1145.3 938.2 True False 602.912868678363 878.2755962658425 854.2945924487137 844.2345304410652 924.6303260985865 1034.7593857060588 1015.0219134416686 1281.7319878183139 1192.0433106310018 886.5759345546047 705.2190469972667 0.8549299274395517 1.2453940375056922 1.211388994789905 1.1971238355454363 1.3111250044018878 1.4672879158779575 1.439300197241557 1.8174948525224415 1.6903163856770052 1.257163910035517 1.0 9.461927630169365 -4.62337023270939 0.7233544565185092 1.3831387289226258 6.161291398102807e-12 0.3588991300024049 0.2126200749308661 7.623733631076555 1.4655763970330977 0.04707878407102155 10.679931529311006 2.3802894257342808e-05 4.62337023270939 -1.3831387289164645 EFVSPSLT(ph)PPPAIAHPALPTIPER ddPTM_A549_PD325901_60min_R1 2 EFVSPSLTPPPAIAHPALPTIPER 24 0 O94763-2;O94763-3;O94763 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 EFVS(0.027)PS(0.027)LT(0.946)PPPAIAHPALPTIPER;EFVS(0.007)PS(0.007)LT(0.986)PPPAIAHPALPTIPER 121.72 4.1396e-16 15203600.0 3283.5 3351.8 4015.8 3620.9 3793.5 3991.7 4002.2999999999997 3703.9 4179.8 4151.7 4423.6 True False 3616.8385028150565 3634.267949143125 4288.336336967136 3844.5547693394487 3527.0576468645427 3959.192918643919 4154.6097166425925 3630.0228088466624 4004.137541646038 3889.5609534664445 3879.525243510798 0.9322889466603852 0.9367816217260321 1.105376577750112 0.9909858882269567 0.9091467191157421 1.0205354186743285 1.070906736228079 0.9356873795108117 1.0321205019463853 1.0025868397099447 1.0 11.92166439822399 EFVTAFK ddPTM_A549_MK2206_60min_R1 1 EFVTAFK 7 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 89.29799999999999 0.011372 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EFVTAFK ddPTM_A549_PD325901_60min_R1 2 EFVTAFK 7 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 129.4 0.015879 3331200.0 3666.9 4207.5 3681.5 3943.7 4905.200000000001 3491.8 3581.2 4017.8 4256.3 4318.7 4747.299999999999 False True 4039.160988570893 4562.080791222534 3931.3487286579275 4187.293392207458 4560.675674021342 3463.3639385026004 3717.484525707835 3937.6618270968734 4077.4225126819547 4046.016544966045 4163.412195614167 0.9701564002780789 1.0957552547951732 0.9442612318807394 1.0057359673919504 1.0954177630611885 0.831857086394421 0.8928937013788636 0.945777559869017 0.9793463440821939 0.9718030199431635 1.0 12.023550683190638 -5.782781529358764 24.989202160965142 0.9757957720749466 1.032955934974302 0.1094023094057035 0.06954030880276896 379.56641067335534 444429.6165044466 0.009533642739611327 0.029679502808383457 1.6489917036446479e-06 5.782781529358764 0.05716016289935544 EFYGEDAKK ddPTM_A549_PD325901_60min_R1 2 EFYGEDAKK 9 1 P30838;C9JMC5;E9PNN6;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 83.869 0.0014130999999999998 17962000.0 7914.5 7363.4 6999.4 7257.3 8700.1 7621.2 7958.5 8146.6 8334.9 8727.3 9149.7 False True 8717.97421365304 7983.939559854551 7474.421374811432 7705.566938475847 8089.034989715617 7559.135474000805 8261.3650725583 7984.109672115933 7984.613138395519 8176.25678858966 8024.344904727093 1.086440615048505 0.9949646550151726 0.9314681090550202 0.960273646006485 1.008061727873937 0.9420252448954136 1.029537634616326 0.9949858545353082 0.995048596888181 1.0189313751672209 1.0 12.97016790228284 EGAAGS(ph)PGGPR ddPTM_A549_MK2206_60min_R1 2 EGAAGSPGGPR 11 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2;H7BZZ8;B5MCI0 A0A087WVP4 SMTN Smoothelin 1 EGAAGS(1)PGGPR;EGAAGS(1)PGGPR 97.439 0.00027905 31140000.0 2581.4 3436.3 2676.4700000000003 3070.7 3633.5 2951.8999999999996 2923.0 2681.9 3905.1000000000004 4328.6 4495.6 True False 3017.0772108293627 3611.192992375995 3056.0336917777695 3823.0216378489613 3099.016963268343 3264.268098687364 3454.0712640751576 3062.067537974289 3020.601085163279 3350.766253656737 3379.2184477519822 0.8928328421136748 1.0686473953106919 0.9043610938531628 1.131333086913105 0.9170809792808622 0.9659831553236551 1.022150925570666 0.9061466683254297 0.8938756496114442 0.9915802442087834 1.0 11.722473900420326 -8.257235925642007 24.884971660494262 0.9452050428210904 0.9882528501858852 0.05805781217263395 0.07330007294139682 744.7376569583439 4408950.123975093 0.011541207734596338 0.014641432013036373 5.530495895640847e-09 8.257235925642007 0.04304780736479474 EGAAGS(ph)PGGPR ddPTM_A549_PD325901_60min_R1 2 EGAAGSPGGPR 11 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2;H7BZZ8;B5MCI0 A0A087WVP4 SMTN Smoothelin 1 EGAAGS(1)PGGPR;EGAAGS(1)PGGPR 101.45 0.00024875 42183000.0 3204.6000000000004 3273.9 3109.6000000000004 3202.1000000000004 3923.2000000000003 3388.5 3041.8999999999996 3081.8 3358.3 3312.6000000000004 3600.8 True False 3529.9286328981675 3549.8030427530507 3320.6361555438534 3399.8864445032614 3647.6479663052532 3360.9051794535935 3157.66116909155 3020.3310813746707 3217.1623298028376 3103.4418706681467 3157.9244273518607 1.1178002241992404 1.1240937281484622 1.0515248961573276 1.0766205850449382 1.1550776626292034 1.0642766338369745 0.999916635668026 0.9564291834264788 1.0187584927422255 0.982747352592791 1.0 11.624760930974464 -7.612068178698632 4.0472814282965315 1.003819823546877 1.1022695312053445 0.7624706697843617 0.029865063201563773 0.09055487117789837 2.822579723588779 0.004590971909133697 0.006934149182195369 2.443046995346001e-08 7.612068178698632 0.09844970765846761 EGAKDIDIS(ph)SPEFK ddPTM_A549_MK2206_60min_R1 1 EGAKDIDISSPEFK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EGAKDIDIS(0.569)S(0.431)PEFK 69.714 0.0022343000000000003 3936800.0 1315.3 1941.5 1507.8 1636.8 1922.0 1469.3 1310.6 1058.0 2377.7 2566.6 2440.9 True False 1537.290484002424 2040.314057183014 1721.6287126186803 2037.8160734787432 1639.2763460580036 1624.7803507575957 1548.7190553188157 1207.974739989111 1839.1547464066805 1986.8032774188853 1834.7571645871105 0.8378713617659437 1.112034931141507 0.9383414578496069 1.1106734519482466 0.893456844152399 0.8855560736416214 0.8441002903331547 0.6583839885214188 1.002396819538001 1.0828698836916606 1.0 10.841373415507691 -6.824946594783969 24.999942943781303 0.9476092140146267 1.0033794241208762 0.05511441175186382 0.1279671343862426 191.51374189097558 75388.8998027865 0.01904111852092915 0.035984342489604845 1.4964196595875672e-07 6.824946594783969 0.055770210106249496 EGAKDIDIS(ph)SPEFK ddPTM_A549_PD325901_60min_R1 1 EGAKDIDISSPEFK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EGAKDIDIS(0.549)S(0.451)PEFK 40.085 0.030676 3264100.0 1757.4 2572.9 1487.3 3144.5 2082.3 1631.6 1895.8 2041.5 3321.3 2342.7 1842.8 True False 1935.8099542704983 2789.727312593336 1588.2371218614512 3338.7286233223494 1936.0464315450208 1618.312790555255 1967.9457064215662 2000.780680974231 3181.7173111318693 2194.781522192318 1616.1472824716748 1.1977930323961214 1.7261590839213814 0.9827304349591587 2.0658566577027706 1.1979393540074543 1.0013399200104265 1.2176772053917413 1.2379940260854891 1.968705046650124 1.3580331112123034 1.0 10.658342964193123 -4.962036707725095 19.544530236191957 1.4144435314434607 0.0006313868662868447 0.009188290135613286 0.3664837025770765 546.6213483836672 259212.4458705715 0.05658211964102238 56567.4362913855 1.0913480889061912e-05 4.962036707725095 -1.4138121445771739 EGAKDIDISS(ph)PEFK ddPTM_A549_MK2206_60min_R1 7 EGAKDIDISSPEFK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EGAKDIDIS(0.004)S(0.996)PEFK;EGAKDIDIS(0.009)S(0.991)PEFK;EGAKDIDIS(0.107)S(0.893)PEFK;EGAKDIDIS(0.009)S(0.991)PEFK;EGAKDIDIS(0.384)S(0.616)PEFK;EGAKDIDIS(0.077)S(0.923)PEFK;EGAKDIDIS(0.017)S(0.983)PEFK 179.39 1.8163e-23 441797000.0 55213.899999999994 68891.70000000001 65992.2 60923.700000000004 75498.1 50218.8 48257.2 44376.100000000006 82863.50000000001 98056.5 96373.8 True False 64532.65646974948 72397.99326975804 75350.88627727439 75850.00923496897 64392.42950172829 55532.9200834585 57024.908588685445 50666.54807110658 64095.04955581862 75905.46854680296 72441.5256784323 0.8908240938520503 0.9993990683069335 1.0401615036623708 1.047051515337583 0.8888883675306078 0.766589598484838 0.787185361636623 0.6994130451643885 0.8847832642335053 1.047817088830336 1.0 16.144529310508013 -4.871132773900074 11.504112534356029 0.9201769619302562 0.00034679956842840077 0.0027498777237867644 0.11742601183705523 4521721.047363903 6227151.626354571 0.017069849558479566 105017280.3107643 1.3454489562077877e-05 4.871132773900074 -0.9198301623618278 EGAKDIDISS(ph)PEFK ddPTM_A549_PD325901_60min_R1 4 EGAKDIDISSPEFK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EGAKDIDIS(0.133)S(0.867)PEFK;EGAKDIDIS(0.282)S(0.718)PEFK;EGAKDIDIS(0.143)S(0.857)PEFK;EGAKDIDIS(0.008)S(0.992)PEFK 242.93 9.795699999999999e-58 1035808000.0 75872.8 75139.2 89702.5 89257.1 94232.29999999999 113041.9 105267.4 113228.90000000001 96025.9 100485.5 103911.5 True False 83575.35080139662 81471.44408504522 95790.25107495232 94770.30834941824 87613.74833178682 112121.32424532245 109273.40851153147 110970.46076314607 91990.2653620623 94140.82838103731 91131.0442492703 0.917089796236652 0.8940031880047021 1.0511264505313658 1.0399344057793685 0.961403976587137 1.2303307305317115 1.1990799558121648 1.2177020649473642 1.0094284128956295 1.0330269904900284 1.0 16.475654978638026 -5.763635629299828 24.999999853983553 1.0486149278778478 0.9055464568179324 0.29803675802716545 0.09358841443048024 61.56799689716891 700874.3952927619 0.014680134217463229 0.049126060198533036 1.7233138195147499e-06 5.763635629299828 -0.14306847105991538 EGALS(ph)RVSDES(ph)LSKVQEAESPVFK ddPTM_A549_MK2206_60min_R1 1 EGALSRVSDESLSKVQEAESPVFK 24 2 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 2 EGALS(0.534)RVS(0.466)DES(0.997)LS(0.003)KVQEAESPVFK 128.43 5.7551e-23 5278900.0 1614.4 1639.2 1637.4 1355.0 2647.3 2021.4 1578.1 1554.8 2449.9 2483.8 2423.5 True False 1886.8712517095057 1722.628278410712 1869.607941399274 1686.9750608282618 2257.885676857104 2235.303206303277 1864.8203427427304 1775.197661375303 1895.001561686388 1922.707854925982 1821.6780648026797 1.0357874358628167 0.9456271729315154 1.026310838079826 0.9260555382550492 1.2394537325131998 1.2270572114208338 1.0236827125350076 0.9744848421214253 1.0402505241186237 1.055459739058913 1.0 10.831052306727145 EGALS(ph)RVSDES(ph)LSKVQEAESPVFK ddPTM_A549_PD325901_60min_R1 1 EGALSRVSDESLSKVQEAESPVFK 24 2 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 2 EGALS(0.487)RVS(0.46)DES(0.872)LS(0.175)KVQEAES(0.006)PVFK 49.968 0.0073342 3782300.0 1613.0 1893.4 1575.7 2321.6 2212.0 1360.8 1913.5 1749.1 1652.4 2183.3 2556.3 True False 1776.7505725721599 2052.963462887879 1682.636477453836 2464.9999592638487 2056.636750985731 1349.7180959718019 1986.3192896073783 1714.2128283575944 1582.955374375787 2045.4460653956908 2241.891305720829 0.7925230665903699 0.9157283663347787 0.750543290461989 1.099518051108764 0.9173668436724082 0.6020443955189124 0.8860016025481318 0.7646279835169922 0.7060803395492109 0.9123752164862533 1.0 11.130500617890677 -5.026710670185652 16.599440048805686 0.8522016767909286 0.7711048898113118 0.017337697972052868 0.13416030302113774 23364176.90586312 1179072474.1229217 0.020091919911801225 20737975.305860862 9.403495689443042e-06 5.026710670185652 -0.08109678697961686 EGALS(ph)S(ph)ESGASSSSYS(ph)GESLR ddPTM_A549_PD325901_60min_R1 1 EGALSSESGASSSSYSGESLR 21 0 Q9NQR7 Q9NQR7 CCDC177 Coiled-coil domain-containing protein 177 3 EGALS(0.453)S(0.453)ES(0.454)GAS(0.459)S(0.08)S(0.081)S(0.056)Y(0.052)S(0.46)GES(0.453)LR 40.113 0.035269999999999996 1628900.0 228.67 235.57 180.5 180.69 260.37 272.16 150.44 249.96 322.98 198.05 280.66 True False 251.8844100620432 255.4223106329869 192.74981543467499 191.850810923236 242.08250942773714 269.94361919436045 156.1650765239267 244.9743517101734 309.4062737932047 185.54508920057552 246.14059925032583 1.0233354872345781 1.0377089818214895 0.7830882675256988 0.7794358651419511 0.9835131228454449 1.096704972753507 0.634454766907861 0.9952618643827776 1.2570306350742955 0.7538174919769149 1.0 7.943338830123764 -8.52868630148938 24.710300613276132 1.1216266851900152 0.904460438847983 0.0 0.17755153738269858 123.5146642124426 525533.8896521258 0.025763080952673385 0.029255315706772398 2.9601498626098753e-09 8.52868630148938 -0.2171662463420322 EGALSRVS(ph)DES(ph)LSKVQEAESPVFK ddPTM_A549_MK2206_60min_R1 1 EGALSRVSDESLSKVQEAESPVFK 24 2 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 2 EGALS(0.143)RVS(0.857)DES(0.994)LS(0.006)KVQEAESPVFK 87.25 1.1462999999999999e-07 7141900.0 1601.3 2197.0 2116.7 1344.6 2709.3 2087.2 2107.6 2383.1 2997.5 2538.8 3203.7 True False 1871.560291973756 2308.817915854279 2416.879888579362 1674.0270603613867 2310.765558988008 2308.066118628771 2490.523638783714 2720.9117229376643 2318.5710360239 1965.2833167268222 2408.13287237811 0.7771831502493171 0.9587585229772831 1.0036322813834664 0.6951556035644455 0.9595673002486991 0.9584463320537129 1.034213546665405 1.1298843822727584 0.962808598569661 0.8161025246028226 1.0 11.233699281839586 -6.9841982282632324 24.995565102418528 0.9956059955052283 0.870081392257192 0.23529174072119463 0.10407476759620615 226.5634227394611 358380.5943773146 0.012515931908730155 0.023647858257911648 1.0370549570602652e-07 6.9841982282632324 -0.12552460324803627 EGALSRVS(ph)DES(ph)LSKVQEAESPVFK ddPTM_A549_PD325901_60min_R1 3 EGALSRVSDESLSKVQEAESPVFK 24 2 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 2 EGALS(0.122)RVS(0.878)DES(0.943)LS(0.057)KVQEAESPVFK;EGALS(0.124)RVS(0.876)DES(0.999)LS(0.001)KVQEAESPVFK;EGALS(0.239)RVS(0.762)DES(0.905)LS(0.089)KVQEAES(0.005)PVFK 119.75 2.0084e-16 34920600.0 5005.0 4762.5 4368.700000000001 5007.4 4916.9 5240.4 4913.4 5120.9 5108.299999999999 5231.299999999999 5641.5 True False 5513.10391551374 5163.852588995204 4665.186253127229 5316.6957253694845 4571.553906384149 5197.72391984908 5100.382125715643 5018.759632231668 4893.615915591767 4900.994825220753 4947.631264414994 1.1142915914461557 1.0437019884920176 0.9429130838186743 1.074594172692077 0.923988402139885 1.0505479576121275 1.0308735338462436 1.0143762467361408 0.9890825839807983 0.9905739864792137 1.0 12.272522268237736 -5.411439010586499 3.6351256226163637 0.999974530523134 1.1129925398717402 0.38857155237257046 0.04131857443408508 0.16287021752492137 3.5126746333431638 0.004928555607432605 0.03747091194387452 3.877581988560066e-06 5.411439010586499 0.11301800934860617 EGAS(ph)PVTEVR ddPTM_A549_PD325901_60min_R1 2 EGASPVTEVR 10 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 EGAS(0.995)PVT(0.005)EVR;EGAS(0.726)PVT(0.274)EVR 128.01 1.5063999999999999e-06 18095400.0 2432.8 2252.3 2149.0 2223.4900000000002 2346.27 2001.0 2072.93 2251.0 2127.93 2169.59 2614.3999999999996 True False 2679.776065067299 2442.109225447537 2294.8440629867955 2360.829927387824 2181.4760893920834 1984.7045194294353 2151.8164855008195 2206.1020391246616 2038.500502175907 2032.6017171354536 2292.8453740470745 1.1687556847050953 1.06509983319852 1.0008717068156205 1.0296507362032663 0.9514274770049519 0.8656076602000669 0.9384917578208396 0.9621678217361412 0.8890702030105823 0.886497510971589 1.0 11.162923349734596 -5.198873866954305 0.776582303867412 0.9422194830166024 1.3164570073313 0.7477650092590663 0.04258331289598015 1.2386284530608753 0.4955388156632184 0.007848876396283856 0.4094999262700211 6.325955507345841e-06 5.198873866954305 0.3742375243146976 EGASGRPGS(ph)PK ddPTM_A549_MK2206_60min_R1 4 EGASGRPGSPK 11 1 Q15025-4;Q15025-3;Q15025;E7EW15;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-2 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 1 EGASGRPGS(1)PK;EGAS(0.203)GRPGS(0.797)PK;EGAS(0.017)GRPGS(0.983)PK;EGAS(0.002)GRPGS(0.998)PK 73.91 0.00040585 179604600.0 9190.8 9576.2 8520.390000000001 6721.369999999999 11072.2 8636.7 8278.839999999998 8222.75 13508.3 13327.199999999999 12590.1 True False 10741.982346513701 10063.587676742713 9728.709422144231 8368.105951733765 9443.494047254646 9550.629861422527 9782.99806495927 9388.34999361575 10448.691618322482 10316.576263857616 9463.630700916949 1.1350804660491338 1.0633960680405283 1.028010256275279 0.8842384298578941 0.9978722063129163 1.0091930003668834 1.0337468117824355 0.9920452615195662 1.1040891121533398 1.0901287877662031 1.0 13.208178061176746 EGASGRPGS(ph)PK ddPTM_A549_PD325901_60min_R1 4 EGASGRPGSPK 11 1 Q15025-4;Q15025-3;Q15025;E7EW15;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-2 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 1 EGAS(0.004)GRPGS(0.996)PK;EGAS(0.002)GRPGS(0.998)PK;EGAS(0.178)GRPGS(0.822)PK;EGAS(0.021)GRPGS(0.979)PK 92.906 0.00024255 386020000.0 12016.3 11102.7 12066.500000000002 11064.8 11644.3 11530.1 10702.0 12597.1 12492.9 12900.9 13062.300000000001 True False 13236.185930067486 12038.363493929042 12885.405251759028 11748.247566015942 10826.444538654217 11436.202688392474 11109.270466359112 12345.840958266228 11967.866858230018 12086.334972318627 11455.719908742003 1.1554215741576213 1.0508604950041085 1.1248010037261835 1.0255355106099187 0.945068893522128 0.9982962903680427 0.9697575145741376 1.0777010136957836 1.0447066577716508 1.0550480518553351 1.0 13.483780503939466 -6.318731683034724 6.325046360377687 1.0148974838965839 1.104309263494802 0.5018698313505014 0.0424489492513782 0.14345071535533913 12.478761473403141 0.005854064386522483 0.01382043227686669 4.80029930401696e-07 6.318731683034724 0.08941177959821811 EGDELEDNGKNFYES(ph)DDDQKEK ddPTM_A549_MK2206_60min_R1 7 EGDELEDNGKNFYESDDDQKEK 22 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFY(0.473)ES(0.527)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFY(0.001)ES(0.999)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK 194.11 1.5659000000000002e-51 811491100.0 23626.72 25905.4 22421.519999999997 20325.2 31206.199999999997 23534.899999999998 22736.800000000003 25792.100000000002 34272.3 33693.3 33889.3 True False 27614.33271815538 27223.874209090343 25601.22868586948 25304.8749124329 26615.809318603177 26025.347496797734 26867.78225009375 29448.20915999351 26509.678771616982 26081.96012898688 25473.651512901793 1.0840351138575237 1.0687071775046504 1.0050082012350319 0.9933744637912075 1.0448368309161686 1.0216575147703706 1.0547283429894558 1.1560262236090768 1.0406705437652104 1.023879914341177 1.0 14.63671815667101 -10.04693325939753 1.2342792750704072 1.0061240254569366 1.0501252180770966 0.1126959502866346 0.041940027466849036 0.5801850435064965 1.7722112331024744 0.01405110345078052 0.008023182283879236 8.975667182906081e-11 10.04693325939753 0.04400119262016 EGDELEDNGKNFYES(ph)DDDQKEK ddPTM_A549_PD325901_60min_R1 4 EGDELEDNGKNFYESDDDQKEK 22 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK 235.55 3.071999999999999e-98 1857779000.0 41811.7 42443.5 45267.0 47335.0 51984.0 41833.100000000006 42553.0 44349.2 49666.0 48990.0 48821.0 True False 46056.39300385331 46020.362700476195 48339.09083258411 50258.77544441514 48332.82317506426 41492.425103320114 44172.37770089509 43464.62041472567 47578.7107381674 45896.76303931428 42816.32650181772 1.075673621881084 1.0748321133650374 1.128987346229526 1.1738226875274194 1.1288409614732442 0.9690795192707296 1.031671357864384 1.0151412782430187 1.1112282305710532 1.0719453719918215 1.0 15.385873402153916 -7.216724703301407 24.965862637102074 1.0436790863742933 1.1180062628333494 0.4670296293919767 0.043487651489385847 421.81152549003656 235513.13580275953 0.007866932656808729 0.01362588749207787 6.071210580781856e-08 7.216724703301407 0.07432717645905607 EGDELEDNGKNFYES(ph)DDDQKEKTDK ddPTM_A549_MK2206_60min_R1 2 EGDELEDNGKNFYESDDDQKEKTDK 25 3 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFYES(1)DDDQKEKTDK;EGDELEDNGKNFYES(1)DDDQKEKTDK 139.61 2.3130999999999997e-25 56385000.0 13216.4 14620.599999999999 12437.5 12705.8 21685.6 13857.1 13910.8 11850.2 23201.7 23786.0 21413.0 True False 15447.005210043064 15364.726090368264 14201.324521285878 15818.721570385042 18495.676966740622 15323.449124401459 16438.212295688223 13530.00213971547 17946.551995501475 18412.726079905562 16095.561131264618 0.9597059142000477 0.95459400048646 0.8823131051766003 0.9828002541432475 1.149116630100825 0.9520295067337926 1.021288550404001 0.8406045635423228 1.11500008288878 1.1439629802119788 1.0 13.974375253176552 -6.524186634385532 24.99335809843829 1.0352770139128498 0.9341288567030199 0.20576892484561793 0.08589285106483993 48.299691306671996 922996.098897441 0.011915609162092085 0.024959835590721464 2.9909790124162306e-07 6.524186634385532 -0.10114815720982984 EGDKHTLSK ddPTM_A549_MK2206_60min_R1 2 EGDKHTLSK 9 1 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ; 81.33800000000001 0.0057077 43102000.0 3035.7 4033.7000000000003 3487.7 3784.7 4156.9 2605.83 3010.1 2982.8 4087.8 4752.9 4952.9 False True 3548.0519442607456 4238.998100674288 3982.308304151857 4711.951669901639 3545.4255166121297 2881.57720099004 3556.996206634494 3405.6210344418896 3161.9198268752257 3679.2165889675894 3722.9582369140467 0.9530195394299452 1.1386101672169135 1.0696623627593485 1.2656472004390165 0.9523140714978653 0.7740020214082698 0.9554220005387117 0.9147620837307062 0.8493030610776164 0.9882508357164074 1.0 11.862233717199905 -6.973728570771827 24.074389399230224 0.9163302694723812 1.1066909050150764 0.5029979741661301 0.0903154752971935 95.44193393728743 87459.48181560576 0.013260821919214577 0.025059961612542727 1.062359312529664e-07 6.973728570771827 0.19036063554269522 EGDKHTLSK ddPTM_A549_PD325901_60min_R1 2 EGDKHTLSK 9 1 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ; 96.89 0.0031317 60299000.0 5351.2 4930.6 4933.2 4753.8 5539.0 5150.9 5031.700000000001 4994.8 4684.3 5656.2 6433.0 False True 5894.4498846547685 5346.118965942205 5267.996617741485 5047.431429336869 5149.959748512639 5108.952778175454 5223.184096951892 4895.174795655203 4487.4351610920485 5299.066566706869 5641.78178214689 1.0447851604802287 0.9475940708766345 0.9337469652604737 0.8946520131829965 0.9128250519737231 0.9055566087902329 0.9258039921856553 0.8676646819530872 0.7953932524104871 0.9392540816582937 1.0 12.461935149822914 -4.2503813711031135 0.8739676383165823 0.900378076390839 1.6991672050504516 0.4164148839423588 0.04736765063327007 11.381854903641374 1.7120424447685219 0.010913677735297061 13.25611111106054 5.618477278622858e-05 4.2503813711031135 0.7987891286596126 EGDKHTLSKK ddPTM_A549_MK2206_60min_R1 2 EGDKHTLSKK 10 2 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ; 50.284 0.0081348 2560500.0 1253.96 1148.26 978.59 855.5 1624.23 1262.84 1008.0 1002.97 2296.96 1986.8 2267.1099999999997 False True 1465.5977916214397 1206.7015293849952 1117.3687769475491 1065.0975384048545 1385.3079186044708 1396.4728905946522 1191.1405522366597 1145.144068966804 1776.7022274913943 1537.9805001074726 1704.1240179471035 0.8600300073154254 0.7081066381768768 0.655685129239363 0.6250117521892209 0.8129149662905996 0.8194667030612787 0.6989752739190799 0.6719839970017661 1.04258974627429 0.9025050312712698 1.0 10.734814616450391 -8.765611195278955 24.9996427095275 1.0201118442733281 0.7292227870094297 0.6604620555419465 0.07856950324982814 34.23646449396366 205161.67984782066 0.01243742359692526 0.013472592571669252 1.715492425053212e-09 8.765611195278955 -0.29088905726389847 EGDKHTLSKK ddPTM_A549_PD325901_60min_R1 2 EGDKHTLSKK 10 2 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ; 58.676 0.0031726999999999997 4736300.0 1575.75 1694.3899999999999 1485.71 1386.82 1933.9099999999999 1903.63 1517.93 1710.29 2069.2799999999997 2080.41 2595.4 False True 1735.7189799941602 1837.1821917622221 1586.5392149000043 1472.4807217032599 1798.0788332273125 1888.1274684265159 1575.6956567931668 1676.1769242534508 1982.3153577150388 1949.0525575550084 2276.18225359615 0.7625571182851858 0.8071331673286047 0.6970176541853905 0.6469080933114566 0.7899538054944941 0.829515064289538 0.6922537306947713 0.7363983800529381 0.8708948304043626 0.8562814135272744 1.0 11.152400363322588 -9.320517229815419 0.7706757287899696 0.980274936062264 0.7399862048473547 0.5064757715242008 0.06671137209302354 0.20255632045716768 0.2602880583621253 0.018984456560513126 0.013833075948625227 4.780603996271349e-10 9.320517229815419 -0.24028873121490935 EGDLIAAQAR ddPTM_A549_MK2206_60min_R1 2 EGDLIAAQAR 10 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ; 109.71 0.00057091 7185200.0 2398.6 2613.3 2211.26 2210.6000000000004 3486.8999999999996 2667.4 2235.0 2372.2 3268.6 3045.3 3746.4 False True 2803.425039860272 2746.305807693214 2524.849918467424 2752.197099237606 2973.9816290684976 2949.6624975231807 2641.0705696914038 2708.466614557815 2528.2673188816407 2357.3646149472956 2816.06548462008 0.995511310078248 0.9752279635158138 0.8965877861352558 0.9773199928299641 1.0560768722570109 1.047441017843065 0.9378583644860499 0.9617910625126029 0.8978013234030789 0.837112854023468 1.0 11.459465167372448 EGDLIAAQAR ddPTM_A549_PD325901_60min_R1 2 EGDLIAAQAR 10 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ; 87.806 0.001986 14562800.0 5318.8 5584.9 5341.299999999999 5229.0 5439.0 5363.1 5335.9 5534.1 5711.3 6101.6 6996.2 False True 5858.760660506387 6055.559123208256 5703.792737846146 5551.983454079368 5056.98340353137 5319.42469173014 5538.960594416513 5423.718034082536 5471.273922580749 5716.343934694433 6135.711752565842 0.9548624343469786 0.9869367022784166 0.9296057194115946 0.9048638003174824 0.8241885550468748 0.8669613088498908 0.9027413310444744 0.8839590666583117 0.8917097385307845 0.9316513169485126 1.0 12.583014993234393 -10.691782779216668 0.9252892901466696 1.0006949348564467 0.9038334914930567 0.15642371287486678 0.045316995616283225 0.4982907229766465 0.750299242145738 0.03230256611413506 0.00824854743239396 2.0333737878552475e-11 10.691782779216668 -0.09686144336338998 EGDLIVEVNKK ddPTM_A549_MK2206_60min_R1 1 EGDLIVEVNKK 11 1 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 0 30.872 0.038912 31517000.0 1895.2 1808.5 1811.5 1150.3 1566.5 1313.6 1513.4 1427.7 1901.6 1897.1 2064.6 False True 2215.063426808633 1900.5449252719457 2068.397939321356 1432.1235516389297 1336.0699251300018 1452.6042801028898 1788.3651902330964 1630.0808471478767 1470.8906362312073 1468.5437924068283 1551.9028399387716 1.4273209442003634 1.2246545829808064 1.3328140693414556 0.9228177916701489 0.8609236936396835 0.936014963514211 1.1523693005830533 1.0503755809946127 0.947798147137381 0.9462859108272318 1.0 10.59982252213152 -6.257175880804192 24.976499454627604 0.9790634659499906 1.3179023617468926 0.7762242503165975 0.08392326479905388 127.52178943568411 747046.579352326 0.011794565423069602 0.030042632685617177 5.531260585730739e-07 6.257175880804192 0.33883889579690196 EGDPVSLSTPLETEFGSPSELS(ph)PR ddPTM_A549_PD325901_60min_R1 1 EGDPVSLSTPLETEFGSPSELSPR 24 0 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 EGDPVSLSTPLET(0.001)EFGS(0.04)PS(0.085)ELS(0.874)PR 89.65899999999999 9.0746e-08 3960600.0 1051.8 1218.0 1482.0 1343.5 1096.7 1501.1 1438.2 1380.0 1241.5 1353.6 1369.9 True False 1158.5779617057635 1320.645134571372 1582.5774319899629 1426.4849436901181 1019.6715754096066 1488.8755392881187 1492.9314880132379 1352.4748174109434 1189.324072432546 1268.1334649931794 1201.4109845115845 0.964347734989926 1.0992450973038674 1.3172656587898068 1.1873413528593915 0.8487283606984322 1.2392724542079983 1.242648441923616 1.125738681306274 0.9899394027232469 1.0555367658043513 1.0 10.23051404427332 -8.749666567505683 7.808320177288146 0.9951813253730541 1.133784799324107 0.13134625752514684 0.12592069601748176 0.17127417888180965 61.27000042038761 0.021178375202408294 0.02353155732251723 1.7796452201921834e-09 8.749666567505683 0.13860347395105288 EGDS(ph)DRDTGNDWASSSSEANSR ddPTM_A549_MK2206_60min_R1 2 EGDSDRDTGNDWASSSSEANSR 22 1 A0A0A0MSY9;Q92800-5;Q92800-4;Q92800-3;Q92800;Q92800-2 A0A0A0MSY9 EZH1 Histone-lysine N-methyltransferase EZH1 1 EGDS(0.98)DRDT(0.019)GNDWAS(0.001)SSSEANSR;EGDS(0.993)DRDT(0.007)GNDWASSSSEANSR 83.33200000000001 1.641e-05 11163000.0 3128.0 3002.3 2635.8999999999996 2160.71 4701.6 3441.4 3157.4 3769.0 5293.0 5250.9 4658.6 True False 3655.9299277424057 3155.1042461398742 3009.7102557312514 2690.084046997959 4010.0008681718573 3805.5666637835607 3731.058709952413 4303.26729207841 4094.143951184154 4064.7180430915687 3501.7410491808414 1.0440320618789427 0.9010101551849313 0.8594896691276785 0.7682132999603861 1.1451448898855363 1.0867641582674403 1.0654867557454644 1.2288936365197731 1.1691738177332938 1.1607705955420158 1.0 11.773856686287493 -6.774624508787592 24.999075070964196 1.0962527315050106 0.8913382291331499 0.6189196525098766 0.0849322526322845 139.91511551381814 265279.8294606965 0.013867731911720119 0.02631818715159708 1.68025614052511e-07 6.774624508787592 -0.2049145023718607 EGDVLRRS(ph)EEHS(ph)PPR ddPTM_A549_MK2206_60min_R1 3 EGDVLRRSEEHSPPR 15 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 EGDVLRRS(1)EEHS(1)PPR;EGDVLRRS(1)EEHS(1)PPR;EGDVLRRS(1)EEHS(1)PPR 127.37 1.1057e-09 414624000.0 3677.93 3194.3500000000004 2738.6400000000003 2334.54 4198.700000000001 3546.92 3269.9300000000003 3060.73 3928.2200000000003 4332.1 5076.9 True False 4298.674667244764 3356.9287708280026 3127.020332621053 2906.5024048014834 3581.0767919842583 3922.2527201450544 3864.0339543404966 3494.5978505925036 3038.484442078333 3353.4756012258827 3816.165614688151 1.1264381846268596 0.879660137890091 0.8194142100608457 0.7616290010094325 0.9383965879785059 1.0277993976594155 1.0125435697727856 0.9157353750953691 0.7962139877743831 0.8787552585030882 1.0 11.897908067720559 -5.257386869476405 23.83267588912314 0.9042641349467763 1.126438357200817 0.36795788527428963 0.08416572222883326 210.20212714836032 1236091.2529251606 0.013790668245253372 0.14387585829282723 5.528574044829425e-06 5.257386869476405 0.2221742222540407 EGDVLRRS(ph)EEHS(ph)PPR ddPTM_A549_PD325901_60min_R1 4 EGDVLRRSEEHSPPR 15 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 EGDVLRRS(1)EEHS(1)PPR;EGDVLRRS(1)EEHS(1)PPR;EGDVLRRS(1)EEHS(1)PPR;EGDVLRRS(1)EEHS(1)PPR 139.0 1.3027e-10 697748000.0 4533.030000000001 4911.4 5017.92 4856.2 6039.1 4684.41 4432.66 5514.4400000000005 5825.3 5685.799999999999 6301.5 True False 4993.21986855969 5325.300914559801 5358.466226404234 5156.156444769598 5614.934449763977 4646.261718071187 4601.3473019446255 5404.45016820551 5580.482899026431 5326.7976176553 5526.455448499709 0.9035121906058651 0.9636015279930437 0.9696027184764369 0.9329952069313003 1.0160100813421535 0.8407308737705518 0.8326037086201018 0.9779234119534392 1.0097761487503514 0.9638723531375594 1.0 12.432138747683949 -8.510294486229757 24.111982158988553 1.0040498523555255 0.9253798718347432 0.25998251485182233 0.051876489159798034 329.18302098559474 630730.021811678 0.008611865124754951 0.01015045175898401 3.088200676500318e-09 8.510294486229757 -0.07866998052078222 EGDVLRRS(ph)EEHS(ph)PPRGINDR ddPTM_A549_MK2206_60min_R1 3 EGDVLRRSEEHSPPRGINDR 20 3 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 EGDVLRRS(1)EEHS(1)PPRGINDR;EGDVLRRS(1)EEHS(1)PPRGINDR;EGDVLRRS(1)EEHS(1)PPRGINDR 98.01899999999999 2.6803e-07 37308300.0 1669.27 2138.99 1909.8700000000001 1644.75 1993.53 1701.5600000000002 1637.38 1368.32 2623.19 2822.93 3130.9900000000002 True False 1951.0019662668049 2247.8554546350233 2180.71828449996 2047.7138238356324 1700.2843778132228 1881.6179497958856 1934.8707514099829 1562.2835503042536 2029.0416533736548 2185.2281523899687 2353.478772072022 0.8289864303934753 0.9551203441091559 0.9265935645470208 0.8700795809740015 0.7224557952210797 0.7995049592647457 0.8221322301141926 0.6638188407915004 0.8621457212411013 0.9285098205776787 1.0 11.200579124914858 -10.074333767972682 1.0050440783184944 0.984472066541633 0.829506291776593 0.28691178404605744 0.08081686603934234 0.39183862898973826 0.7949439188744463 0.032371641138809006 0.016270753388706653 8.426868794012223e-11 10.074333767972682 -0.15496577476504003 EGDVLRRS(ph)EEHS(ph)PPRGINDR ddPTM_A549_PD325901_60min_R1 4 EGDVLRRSEEHSPPRGINDR 20 3 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 EGDVLRRS(1)EEHS(1)PPRGINDR;EGDVLRRS(1)EEHS(1)PPRGINDR;EGDVLRRS(1)EEHS(1)PPRGINDR;EGDVLRRS(1)EEHS(1)PPRGINDR 86.08 8.3664e-06 67236100.0 3871.9800000000005 3519.68 3942.4900000000002 3516.7200000000003 4250.51 4242.34 3306.1400000000003 4037.4800000000005 4523.2699999999995 3833.85 4873.02 True False 4265.060559198978 3816.2957859180324 4210.051079518292 3733.9398073493953 3951.9688410634544 4207.7917895833425 3431.9569668892273 3956.949294058213 4333.172691995136 3591.780056711064 4273.66943261891 0.9979856014706648 0.8929787027489867 0.9851138806817745 0.8737081485175218 0.9247249707476048 0.9845852272679879 0.8030468947117699 0.925890351709629 1.0139232245999341 0.8404440524334182 1.0 12.061259604834527 -8.748675462789041 10.156386935027227 1.006582469770301 0.9209076835645174 0.0 0.07308481070377727 0.18556547567304846 135.66438662259728 0.008448103658901421 0.009434902740199497 1.7837111915101915e-09 8.748675462789041 -0.08567478620578362 EGDVLRRS(ph)EEHSPPR ddPTM_A549_PD325901_60min_R1 2 EGDVLRRSEEHSPPR 15 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 EGDVLRRS(0.999)EEHS(0.001)PPR;EGDVLRRS(0.965)EEHS(0.035)PPR 61.648 0.0010569000000000002 7910500.0 868.55 691.47 786.04 555.54 684.72 661.87 786.8 756.69 711.79 897.3399999999999 756.84 True False 956.7245566072838 749.7426036141763 839.3854012425036 589.8544440771186 636.6276293557634 656.4799501622992 816.7421045534807 741.5972243381785 681.8759416164012 840.6817992589979 663.7534780040496 1.4413853762156057 1.1295497928970581 1.2646041475618188 0.8886649390536525 0.9591326455571194 0.9890418233835515 1.2304901316818375 1.1172780993452722 1.0273030036194266 1.266557279348627 1.0 9.374503705293849 -4.940350309881637 0.9948139735504119 1.0275678488655595 1.8826329685031544 0.3718949822898103 0.12588258410117972 1.776702472971928 0.8835968601331131 0.01534783125172421 1.8839175449407146 1.1472278731744665e-05 4.940350309881637 0.8550651196375949 EGDVLTLLESER ddPTM_A549_MK2206_60min_R1 2 EGDVLTLLESER 12 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ; 138.25 4.5838e-08 13064000.0 1775.54 1740.25 1524.74 1507.78 2437.1000000000004 1944.92 1836.9699999999998 1539.01 2789.5 2308.46 2062.67 False True 2075.2077442147533 1828.8212917912656 1740.97105934355 1877.1861676868161 2078.6058184068484 2150.730143466591 2170.7236708751757 1757.1693805204554 2157.6827039161517 1786.9772827049005 1550.452112204063 1.3384532988024493 1.1795406497215084 1.1228796075930734 1.2107346966158667 1.3406449654559032 1.3871632193845678 1.4000585079595644 1.1333270900076566 1.391647434275718 1.1525523869064247 1.0 10.598473251726691 -10.93841056497953 1.1473800945818593 0.9970296002971346 1.2836184668270405 0.31547553867900147 0.10727408718244398 0.3390273502801032 0.779377742546181 0.07841067988469032 0.017598293351191844 1.152363343586975e-11 10.93841056497953 0.2865888665299059 EGDVLTLLESER ddPTM_A549_PD325901_60min_R1 2 EGDVLTLLESER 12 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ; 145.55 2.0748e-11 20015900.0 1632.27 1680.66 1541.18 1737.3600000000001 1999.79 1783.67 1403.18 1765.6999999999998 2088.79 1709.46 2156.4 False True 1797.9768487863353 1822.2951164767835 1645.773742668212 1844.6727813691589 1859.3316493009731 1769.1443828939045 1456.578782749559 1730.4817283351465 2001.0054202628903 1601.5244038617318 1891.1764705458659 0.9507187070000772 0.9635775110668543 0.870238059906265 0.9754101799060115 0.98316136979237 0.9354729241017163 0.7701971790761201 0.9150292187358186 1.0580744057614695 0.8468402757778974 1.0 10.88506827582001 -8.752856479145548 24.934522403457926 1.0274240252723985 0.9196490765309715 0.0 0.07942361496021413 134.57121882277522 390947.8400919854 0.01042065882912135 0.01172367232027621 1.7666215378482957e-09 8.752856479145548 -0.10777494874142701 EGDYVLFHHEGGVDVGDVDAK ddPTM_A549_MK2206_60min_R1 2 EGDYVLFHHEGGVDVGDVDAK 21 0 P53396;P53396-2 P53396 ACLY ATP-citrate synthase 0 ; 133.47 1.2566e-17 6772500.0 1024.95 999.6 770.35 776.69 1440.1100000000001 938.4300000000001 1086.13 938.03 1405.19 1497.2800000000002 1657.21 False True 1197.9365023783812 1050.4753703631939 879.5972136661358 966.9790848669394 1228.2717267021815 1037.7340397205817 1283.4657619055588 1070.9986250963952 1086.9167086273303 1159.0434080938787 1245.6790203307814 0.9616734992135273 0.843295386065222 0.7061186704682277 0.7762666538368486 0.9860258595155776 0.8330669641084736 1.0303342522094845 0.8597709422865603 0.872549582105595 0.9304510946857745 1.0 10.28271665524448 -6.757497805586045 24.997993608428672 0.9337818986357224 0.8151054709299532 0.29343835313998745 0.0806122559275072 97.81904853748621 620372.6102300449 0.01214991229917948 0.02457542665429247 1.747842093935892e-07 6.757497805586045 -0.11867642770576914 EGEDGDQPT(ph)TPPKPLK ddPTM_A549_MK2206_60min_R1 1 EGEDGDQPTTPPKPLK 16 1 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 EGEDGDQPT(0.5)T(0.5)PPKPLK 102.89 4.3479999999999995e-07 72903000.0 9734.3 15975.0 9198.3 23679.0 17323.0 15617.0 10295.0 11711.0 19613.0 15199.0 30014.0 True False 11377.21185921447 16788.059265258125 10502.757253800504 29480.356062990715 14774.809647639337 17269.580574274394 12165.468239361518 13371.070113433345 15170.686815525181 11765.535343836058 22560.69545574074 0.5042934904880981 0.7441286239687384 0.4655333996420752 1.3067130896219432 0.6548915868584084 0.7654719956729001 0.5392328557968245 0.5926710078447948 0.6724387927352162 0.5215058803004332 1.0 14.461523920472496 -10.640509155615948 0.93417289131255 0.9984323157273757 0.7009018350698158 0.0 0.2563489899790677 0.698770668274139 1.0954647066910086 0.13680742658934375 0.03761063899963298 2.2881834725326208e-11 10.640509155615948 -0.2975304806575598 EGEDGDQPT(ph)TPPKPLK ddPTM_A549_PD325901_60min_R1 1 EGEDGDQPTTPPKPLK 16 1 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 EGEDGDQPT(0.5)T(0.5)PPKPLK 142.3 1.2070999999999999e-14 99239000.0 15352.0 13651.0 14486.0 13958.0 16387.0 12242.0 13791.0 14002.0 14465.0 16063.0 16542.0 True False 16910.523738454933 14801.417678188658 15469.107071394465 14820.153959082001 15236.033652080987 12142.305210822171 14315.824051724769 13722.7191256435 13857.086353392497 15048.779438671272 14507.43886837772 1.165645010940924 1.020264004727377 1.0662879376395595 1.021555499460757 1.0502221508781544 0.836970971994864 0.9867919611179187 0.9459091470345813 0.9551711007790069 1.037314689050562 1.0 13.824505229207622 -4.255083174822454 0.5848397566565489 0.9707156094805279 1.6296069943990108 0.4757877054852514 0.05677365987887237 5.828341423260171 0.5693511737055064 0.009054958923719963 3.413828073996976 5.557978022899741e-05 4.255083174822454 0.6588913849184829 EGEDGDQPTT(ph)PPKPLK ddPTM_A549_MK2206_60min_R1 1 EGEDGDQPTTPPKPLK 16 1 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 EGEDGDQPT(0.115)T(0.885)PPKPLK 141.6 1.2787e-14 77034000.0 13143.0 19683.0 12069.0 22310.0 22732.0 18736.0 14115.0 15488.0 24026.0 18631.0 30328.0 True False 15361.217084500777 20684.780627109605 13780.565680192898 27775.95100153395 19388.152912898306 20718.631084049764 16679.51279248062 17683.471430010726 18584.149361638105 14422.244160208544 22796.72058978159 0.6738345115913862 0.907357729180633 0.604497722640418 1.2184187147507635 0.8504799116408374 0.9088426119209747 0.7316628164472503 0.7757024244064811 0.8152115252036852 0.632645564234058 1.0 14.47653868073139 -10.687146431463523 0.9661649711317188 0.9993130703331436 0.8368987522165672 0.0 0.18602745924354724 0.8658526952423626 1.4473827897015816 0.09539032447324629 0.025565044048084695 2.055197526339229e-11 10.687146431463523 -0.16241431811657647 EGEDGDQPTT(ph)PPKPLK ddPTM_A549_PD325901_60min_R1 1 EGEDGDQPTTPPKPLK 16 1 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 EGEDGDQPT(0.166)T(0.834)PPKPLK 78.08800000000001 0.00015396 84456000.0 6359.7 6148.8 5659.2 5806.9 7013.9 5704.4 6075.9 6811.4 6215.0 6500.9 7534.6 True False 7005.332062236312 6666.980955215478 6043.267343534142 6165.579024573238 6521.26786064142 5657.945257687791 6307.121699360052 6675.541283560067 5953.805163244687 6090.432064549464 6607.891965764647 1.0601462763814533 1.008942184550984 0.9145529882819191 0.9330629278621649 0.986890810931531 0.8562405812627522 0.9544831743674262 1.0102376549353274 0.9010143013976666 0.9216906232886173 1.0 12.689974384595946 -5.546899707055363 4.399641874973415 0.948829973765904 1.0512157876920236 0.41171942752668933 0.04375060887489636 0.15313860463080806 6.900088707694237 0.006566184039144458 0.03176945618230856 2.8385744733869813e-06 5.546899707055363 0.10238581392611967 EGEEAGPGDPLLEAVPK ddPTM_A549_MK2206_60min_R1 1 EGEEAGPGDPLLEAVPK 17 0 K7EL68;Q16543 K7EL68 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 0 53.528 0.0093113 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EGEEPT(ph)VYSDEEEPKDESAR ddPTM_A549_PD325901_60min_R1 1 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.459)VY(0.085)S(0.453)DEEEPKDES(0.003)AR 40.141999999999996 0.025681 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EGEEPTVYS(ph)DEEEPK ddPTM_A549_MK2206_60min_R1 2 EGEEPTVYSDEEEPK 15 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPTVYS(1)DEEEPK;EGEEPTVYS(1)DEEEPK 246.96 2.1020999999999994e-65 32138000.0 4578.7 5436.4 4489.299999999999 4788.3 8391.6 6567.200000000001 5819.0 6796.700000000001 8781.3 6119.0 4830.1 True False 5351.472621532656 5713.089539258172 5125.95024509818 5961.433714954954 7157.206756285298 7262.1367450454545 6876.236977643971 7760.153039020784 6792.349570854596 4736.713650169932 3630.652866021633 1.4739697842268928 1.573570856284703 1.4118535795781135 1.641972927444128 1.9713277529966569 2.000228888035528 1.8939395286167242 2.1373987889743202 1.870834205721645 1.304645149223613 1.0 11.826013282437222 -10.662666631999066 0.962648055120443 1.0064732289530163 1.7797589073791444 0.4989373372063717 0.23434161205269183 0.3117473319833193 0.5207842371191352 0.161678248511153 0.04452206732625196 2.17436960234767e-11 10.662666631999066 0.7732856784261282 EGEEPTVYS(ph)DEEEPK ddPTM_A549_PD325901_60min_R1 2 EGEEPTVYSDEEEPK 15 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.015)VYS(0.985)DEEEPK;EGEEPTVYS(1)DEEEPK 265.95 1.5054999999999997e-90 29200000.0 6743.5 6971.299999999999 9146.2 7043.0 7684.700000000001 5578.7 7103.0 6308.8 6471.9 7548.2 7800.8 True False 7428.095155697679 7558.795916779473 9766.916132568553 7478.030114186458 7144.953182775786 5533.268916812092 7373.308551910741 6182.966034842144 6199.9085496385005 7071.605363816131 6841.35105334548 1.085764361129411 1.104868885961225 1.4276297264109032 1.0930633519426893 1.0443775106792454 0.8087976883025577 1.0777562055239263 0.9037638891251779 0.9062403758109578 1.033656263021038 1.0 12.74006554624777 -6.746901574619049 2.832477189424304 0.9514905575323013 1.2007501425380542 0.47902453560296065 0.10928559537388599 0.1522856274194749 2.502300409489932 0.014902998118395409 0.03221972046791786 1.7910117100688725e-07 6.746901574619049 0.24925958500575296 EGEEPTVYS(ph)DEEEPKDESAR ddPTM_A549_MK2206_60min_R1 18 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.072)VY(0.006)S(0.922)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.083)VY(0.053)S(0.863)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVY(0.038)S(0.961)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.007)VY(0.007)S(0.986)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.005)VYS(0.995)DEEEPKDESAR 316.97 5.977599999999998e-184 14710369100.0 142516.36999999997 151595.09999999998 132260.56000000003 127278.74000000002 180009.21000000002 144396.74000000002 134104.48 147920.82 193447.99 199942.73 197080.60000000003 True False 166569.64906528406 159310.64307497544 151017.09619513593 158462.03701375978 153530.09366575858 159676.7071840015 158469.52813949416 168889.04922351253 149632.3291379619 154775.52842674323 148140.04787214837 1.1244066102168488 1.075405640562961 1.0194211380670715 1.0696772364385878 1.0363847985135126 1.0778767084091252 1.0697278043021872 1.1400634173499897 1.0100734493288503 1.0447919428264367 1.0 17.176602182965016 -8.958003232794134 24.97019355823957 1.0044441374238402 1.0730475575645113 0.34189333900528096 0.034440707098107044 83.98090033031622 49933.096947306585 0.005500959951099202 0.005851134860507517 1.1015311099517063e-09 8.958003232794134 0.06860342014067111 EGEEPTVYS(ph)DEEEPKDESAR ddPTM_A549_PD325901_60min_R1 18 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVY(0.001)S(0.999)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.175)VY(0.008)S(0.818)DEEEPKDESAR;EGEEPT(0.342)VY(0.075)S(0.582)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.001)VYS(0.999)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.007)VY(0.01)S(0.983)DEEEPKDESAR 312.56 9.513399999999996e-164 18225140700.0 167016.97999999998 172789.02000000002 166867.11 176807.44999999998 198484.32 164646.52999999997 167295.81999999998 171275.71 188924.19 182351.45999999996 194049.84 True False 183972.42085819808 187350.55711851837 178191.7155380473 187728.4446276467 184543.4660969313 163305.70324806287 173662.35397788504 167859.481600855 180984.36329586807 170837.75769530525 170182.93986328598 1.081027399138772 1.1008774279550215 1.0470598032987035 1.103097906161779 1.084382877891178 0.9595891537615472 1.0204451404905461 0.986347290367075 1.0634694843164612 1.003847728994136 1.0 17.37672689449096 -7.160219770035496 24.99995599129675 1.0218399746341347 1.0833546176964393 0.6054982898961381 0.0296819627503759 28.328947683816914 6991.219508947222 0.004916463396394725 0.008515564352528435 6.914809658882084e-08 7.160219770035496 0.061514643062304586 EGEEPTVYS(ph)DEEEPKDESARK ddPTM_A549_MK2206_60min_R1 4 EGEEPTVYSDEEEPKDESARK 21 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPTVYS(1)DEEEPKDESARK;EGEEPTVYS(1)DEEEPKDESARK;EGEEPTVYS(1)DEEEPKDESARK;EGEEPTVYS(1)DEEEPKDESARK 246.31 3.3690999999999995e-87 1255397000.0 20614.8 24262.799999999996 23191.800000000003 20982.4 34838.5 21778.800000000003 21555.2 20038.2 33568.6 35086.299999999996 35234.399999999994 True False 24094.074256529457 25497.672885202166 26480.745972483015 26123.08894193574 29713.802800281886 24083.418160402598 25471.500824971878 22878.676214413787 25965.365698038975 27160.28046150635 26484.726060030367 0.9097346977241807 0.9627312295928249 0.9998497214002391 0.9863454461535702 1.1219222253963468 0.909332348985413 0.9617430351077859 0.8638441705063101 0.9803901931696704 1.0255073207079721 1.0 14.692872966006927 -9.339787906232836 2.9318278940028826 0.9932434819825838 0.9675630901103386 0.059851937235885444 0.06323797382887975 0.7727379827287422 13.435363295793708 0.012623979136915929 0.011390384532992372 4.5731146952358577e-10 9.339787906232836 -0.025680391872245245 EGEEPTVYS(ph)DEEEPKDESARK ddPTM_A549_PD325901_60min_R1 4 EGEEPTVYSDEEEPKDESARK 21 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.036)VYS(0.964)DEEEPKDESARK;EGEEPTVYS(1)DEEEPKDESARK;EGEEPT(0.001)VYS(0.999)DEEEPKDESARK;EGEEPTVYS(1)DEEEPKDESARK 268.97 1.8711999999999994e-112 1376903000.0 53755.4 55200.3 51636.899999999994 58560.3 64181.0 61752.8 61830.0 65004.0 55135.8 61231.5 68862.0 True False 59212.60863536611 59852.22300646972 55141.29055190453 62177.43673090919 59673.14797243001 61249.90567087557 64182.974484674254 63707.44422534855 52818.6340659093 57365.33264016682 60392.41055218393 0.9804644009730598 0.9910553736674007 0.91305000161002 1.0295571275000333 0.9880901826375613 1.0141987231649032 1.0627655676902477 1.054891560758287 0.874590591482844 0.9498765178548143 1.0 15.882079638591705 -8.753146505761666 24.99956477504423 0.9407788889598605 1.0033645193755774 0.2633547806339259 0.04673300921072304 223.05302365487717 672411.0204613345 0.009957965462093338 0.011200962239842047 1.7654421624618566e-09 8.753146505761666 0.06258563041571685 EGEEPTVYSDEEEPKDESAR ddPTM_A549_MK2206_60min_R1 2 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 0 ; 111.18 3.6811000000000003e-10 4810700.0 1297.13 1299.44 1528.01 1296.71 1591.32 1203.02 1438.8200000000002 1371.7199999999998 1766.09 2071.57 1927.1599999999999 False True 1516.053832216274 1365.575945643007 1744.7047945141735 1614.4040082115248 1357.2389360088578 1330.3227778999542 1700.234969612254 1566.1655107163158 1366.0734348662043 1603.6008982321507 1448.592985089801 1.0465699115078146 0.9426912595178364 1.2044133945643924 1.1144634999812904 0.9369360130683775 0.9183551153379946 1.1737147612287058 1.081163257613888 0.9430346887821763 1.107005842730034 1.0 10.500436578743878 -8.761254051061556 24.999876682862386 0.9730997134405247 1.0515165236192416 0.0 0.09790420502684175 7.6055411742553956 1025957.8873708621 0.015677795998294854 0.017234704373610982 1.7327900637613112e-09 8.761254051061556 0.07841681017871693 EGEEPTVYSDEEEPKDESAR ddPTM_A549_PD325901_60min_R1 1 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 0 84.249 8.557200000000001e-05 1925500.0 1028.8 882.04 853.24 847.96 892.01 910.11 902.31 1069.0 788.72 1128.6 1155.1 False True 1133.2430186374697 956.3726063196492 911.1459973489316 900.3365633431133 829.3582948674419 902.6983659060086 936.6479008129777 1047.6779563857226 755.5728412476824 1057.3400033919183 1013.030022782196 1.1186667652012123 0.944071335312509 0.8994264502117626 0.888756051741112 0.8186907359267436 0.8910874757954641 0.924600337352844 1.0342022771530197 0.7458543421769173 1.04374004680338 1.0 9.984461216034253 -5.201872451567354 1.9463452976280082 0.8889027935396797 1.212252446361422 0.26426991422040635 0.08747255980938884 0.8652214906261154 3.0061102910982704 0.013600242259311767 0.5260465828898044 6.28242841064994e-06 5.201872451567354 0.3233496528217422 EGEET(ph)EGSEEDDKENDKTEEMPNDSVLENK ddPTM_A549_MK2206_60min_R1 1 EGEETEGSEEDDKENDKTEEMPNDSVLENK 30 2 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 EGEET(0.512)EGS(0.485)EEDDKENDKT(0.003)EEMPNDSVLENK 52.586000000000006 0.0035398000000000005 3852400.0 1169.9 1325.4 1185.3 997.79 1178.9 1263.8 1059.6 866.14 1661.3 1864.9 1537.6 True False 1367.3505186911254 1392.8571987588803 1353.3933632225242 1242.2485947924945 1005.4853716793868 1397.534477157456 1252.1156043154415 988.917997442503 1285.0182025509596 1443.6177947707004 1155.7714843988454 1.183063033781569 1.20513199846192 1.1709869827135149 1.0748219795703202 0.8699690079327167 1.2091788870222555 1.0833591425442615 0.8556345357117645 1.1118272252748471 1.2490512305047683 1.0 10.174640465447133 -6.282410263770897 3.9638570673227775 1.0405818266886115 1.1909684551094273 0.1974961682528058 0.11463242490661 0.20037806841034603 7.216237109976448 0.013425830067842176 0.03466639309153876 5.219029314502774e-07 6.282410263770897 0.15038662842081574 EGEETLR ddPTM_A549_MK2206_60min_R1 2 EGEETLR 7 0 Q16719-2;Q16719;A0A087X297;A0A087WYM2;A0A087WYQ7 Q16719-2 KYNU Kynureninase 0 ; 81.297 0.012792 1113900.0 620.42 349.16 341.11 291.23 509.71 465.54 488.63 430.27 633.15 628.8 459.33 False True 725.1317281873218 366.9307526170596 389.4845272326289 362.5813630738116 434.73233420875437 514.8031337995584 577.4077460708328 491.26209014661106 489.7425359327877 486.75364327943385 345.2656841369157 2.1002137238167276 1.0627489770212803 1.1280719316379504 1.050151751918761 1.259124072221323 1.4910347522269614 1.672357759834194 1.4228523502839634 1.4184512346109075 1.4097944442298265 1.0 8.431563142020835 -10.654407862931082 0.9280772568088709 1.000467840496011 1.3791314729575224 0.0 0.3106620462064103 0.7653403081365504 1.1760101717757596 0.19132913547707203 0.05137565512290008 2.2161142026983967e-11 10.654407862931082 0.37866363246151136 EGEETLR ddPTM_A549_PD325901_60min_R1 1 EGEETLR 7 0 Q16719-2;Q16719;A0A087X297;A0A087WYM2;A0A087WYQ7 Q16719-2 KYNU Kynureninase 0 79.116 0.045612 1248400.0 665.89 781.81 668.68 615.69 744.89 589.64 696.21 689.57 600.69 758.37 661.27 False True 733.4906625976907 847.6958724624332 714.0606458994926 653.7197729665567 692.5714961309949 584.8381673345189 722.7046525307306 675.8159853928004 575.4450882557445 710.4863887757658 579.9379821359042 1.2647743124122581 1.4617009035007158 1.2312707011698325 1.127223587872129 1.1942164808386284 1.008449498652541 1.2461757546367607 1.1653245798865919 0.9922528028538286 1.2251075298759593 1.0 9.179754818206543 -5.580900616720645 0.26237193786940355 0.97220798009686 1.6358659607681756 0.24345699026557022 0.11595601405718656 3.508983164250547 0.20705767312140924 0.050255218095882626 0.7374960931111282 2.624819134224666e-06 5.580900616720645 0.6636579806713155 EGEFVAQFK ddPTM_A549_MK2206_60min_R1 2 EGEFVAQFK 9 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 101.64 0.0020085999999999997 4761600.0 5094.200000000001 4990.4 5102.200000000001 3887.1000000000004 7038.9 5212.0 5666.2 4967.6 7516.0 7240.799999999999 6847.9 False True 5953.976418767695 5244.390044278196 5825.768681206412 4839.439674498549 6003.487134374449 5763.5303805544045 6695.675195519206 5671.772512636962 5813.638000585693 5605.098251045994 5147.3774375746925 1.1567009590757833 1.01884699691834 1.1317935690279124 0.9401757949925592 1.1663195884083317 1.1197023048051489 1.300793516061653 1.1018761653719629 1.1294368969618294 1.0889231106563204 1.0 12.329621858415532 -10.648914186003374 0.9502633300664782 1.0009926268471452 1.1168070080991483 0.0639071779428535 0.08856988726757539 0.7132702474244408 1.1608875352133445 0.05485457400719653 0.015173567787927883 2.2443253452608625e-11 10.648914186003374 0.11581438125200316 EGEGGQESFPELPS(ph)EE ddPTM_A549_PD325901_60min_R1 2 EGEGGQESFPELPSEE 16 0 Q9BZQ8 Q9BZQ8 FAM129A Protein Niban 1 EGEGGQESFPELPS(1)EE;EGEGGQESFPELPS(1)EE 101.3 1.2303e-06 3985900.0 583.79 752.95 426.78 548.26 583.05 718.44 758.85 673.79 716.44 892.94 928.44 True False 643.0559310365164 816.4037389782551 455.7438572366237 582.124775011198 542.098579413305 712.5892628380232 787.7284520086532 660.3507298719703 686.3305182872123 836.5596160099061 814.247765866075 0.7897546152337669 1.0026478096748437 0.5597115231281863 0.7149233923804762 0.6657661244384275 0.8751504059456365 0.9674309037505132 0.8109948317384549 0.84290132200387 1.0274017947351677 1.0 9.669324045933077 -7.436058894157397 5.951654242662952 0.9165641763377046 0.7493022924135027 0.3618234493004887 0.11615602769576362 0.22277585585063392 12.279119284293774 0.017857135648708954 0.028592415311559125 3.663878858539991e-08 7.436058894157397 -0.16726188392420194 EGEKQDLS(ph)SIK ddPTM_A549_PD325901_60min_R1 2 EGEKQDLSSIK 11 1 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 EGEKQDLS(0.988)S(0.012)IK;EGEKQDLS(0.915)S(0.085)IK 46.318000000000005 0.009916 11532700.0 3964.7 4460.8 3802.2 4379.8 5489.700000000001 4483.200000000001 4564.299999999999 4580.6 4347.1 4295.8 5336.0 True False 4367.193425342119 4836.727271178963 4060.24015648599 4650.330298752496 5104.122410436872 4446.690305600222 4737.996934180794 4489.236339588819 4164.406504447459 4024.5624548741844 4679.705827690937 0.9332196480172732 1.0335536995848953 0.8676272197411596 0.9937227830081499 1.0906930047257586 0.9502072286869173 1.0124561475947769 0.9592988330644492 0.8898863855513461 0.8600033000065702 1.0 12.19220212766086 -8.510788403197285 24.374092396754172 0.9467698391425704 0.9839999350794876 0.12561732446947027 0.06438808441418015 960.3233146827282 1936010.2711265488 0.010671865647810343 0.012552528503735193 3.0846905059914137e-09 8.510788403197285 0.037230095936917174 EGESVAMNYKPS(ph)PLQVK ddPTM_A549_MK2206_60min_R1 3 EGESVAMNYKPSPLQVK 17 1 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRV9;Q8IW50-7 Q5T593 FAM219A Protein FAM219A 1 EGES(0.002)VAMNY(0.084)KPS(0.914)PLQVK;EGES(0.008)VAMNY(0.245)KPS(0.747)PLQVK;EGES(0.003)VAMNY(0.173)KPS(0.824)PLQVK 64.203 0.00062309 15425900.0 6355.799999999999 7943.2 7785.8 7630.0 10776.5 8042.099999999999 7607.800000000001 8385.599999999999 12110.3 10842.6 11968.099999999999 True False 7428.5036556090645 8347.474951849663 8889.943514197192 9499.350342523712 9191.291125543226 8893.109684086068 8990.038783041731 9574.284479822949 9367.336386175215 8393.249129487254 8996.090467243645 0.8257479938266027 0.927900289825263 0.9882007686079911 1.0559420647349564 1.0216983876507626 0.9885527181465608 0.999327298427695 1.0642716983210219 1.041267472829819 0.9329885198518799 1.0 13.135082454002307 -5.446131372886895 1.6571797257679377 1.021604195777075 0.7949811476840187 0.7129802102776406 0.03524171998926653 0.1859326303454926 0.6388192161660844 0.003653018220499363 0.059626871354803525 3.5798813029690527e-06 5.446131372886895 -0.22662304809305622 EGESVAMNYKPS(ph)PLQVK ddPTM_A549_PD325901_60min_R1 2 EGESVAMNYKPSPLQVK 17 1 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRV9;Q8IW50-7 Q5T593 FAM219A Protein FAM219A 1 EGES(0.13)VAMNY(0.37)KPS(0.5)PLQVK;EGES(0.002)VAMNY(0.052)KPS(0.946)PLQVK 63.184 0.00067826 17471300.0 8834.7 8514.3 8792.900000000001 8756.3 10691.3 10229.9 8442.3 8756.3 9652.1 9464.599999999999 9389.599999999999 True False 9731.592240237609 9231.82994193845 9389.639070003068 9297.156763999841 9940.3799709827 10146.59108611254 8763.57634630382 8581.648727315536 9246.455803081908 8867.003540761261 8234.73872557849 1.1817730427815079 1.1210835279160496 1.1402473573128995 1.129016605605385 1.20712754857737 1.2321691585181096 1.0642203278511644 1.0421276270319888 1.1228596451227837 1.076780191364038 1.0 13.007507161050635 -11.350600252276067 0.2327304903579539 0.8835736740968253 1.1698727763903394 0.37472362571731166 0.05327594487458707 5.0258909444069735 0.2788419606723294 0.41288937650049407 0.042948736745800575 4.460666429406967e-12 11.350600252276067 0.2862991022935141 EGETQGVAFEHESPADFQNS(ph)QSPVQDQDK ddPTM_A549_MK2206_60min_R1 1 EGETQGVAFEHESPADFQNSQSPVQDQDK 29 0 E9PGM9;P78332;F8WCA5;P78332-3 E9PGM9 RBM6 RNA-binding protein 6 1 EGETQGVAFEHES(0.024)PADFQNS(0.529)QS(0.447)PVQDQDK 66.461 0.00016881 1764100.0 450.21 581.48 551.28 503.42 609.55 579.06 362.45 443.91 695.25 503.18 738.66 True False 526.194441422285 611.0748482981096 629.4597935352342 626.7579225993826 519.8860024660027 640.3357448510808 428.3024733712076 506.83560191735955 537.7769850861102 389.51128852631297 555.2303360211049 0.9477047763512039 1.1005790005589355 1.133691285757318 1.1288250694132802 0.936342935062974 1.1532794649511746 0.7713960235683652 0.9128384546663066 0.9685655667518656 0.7015309921961959 1.0 9.116942584116654 EGFES(ph)DTDSEFTFK ddPTM_A549_PD325901_60min_R1 2 EGFESDTDSEFTFK 14 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;E9PMP7 E9PMS6 LMO7 LIM domain only protein 7 1 EGFES(0.957)DT(0.033)DS(0.009)EFT(0.001)FK;EGFES(0.997)DT(0.002)DS(0.001)EFTFK 138.77 1.9843e-28 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EGFGLSENPFAS(ph)LSPDEQKDEK ddPTM_A549_PD325901_60min_R1 1 EGFGLSENPFASLSPDEQKDEK 22 1 B4DT96;C9JYA1;O15504-2;O15504 B4DT96 NUPL2 Nucleoporin-like protein 2 1 EGFGLSENPFAS(0.617)LS(0.383)PDEQKDEK 84.404 1.153e-05 7978400.0 1479.3 1484.4 1197.1 1111.3 1769.7 1391.3 1545.0 1321.3 1467.0 1775.0 1159.3 True False 1629.4774469968984 1609.4955975022524 1278.3424047470883 1179.9424770545802 1645.4023771335653 1379.969714084044 1603.7958204564393 1294.9456349602017 1405.3470916299195 1662.9261970766047 1016.7134494081905 1.6026909528396482 1.5830375790141353 1.25732811490906 1.1605457543041278 1.618354097795522 1.3572848031933658 1.577431498904611 1.2736584095685612 1.3822450095923735 1.63558984888472 1.0 9.989697411871896 -10.857872251348597 0.3976655812531753 0.8445965856917135 1.4487565467394379 0.0 0.2407137642306303 1.5273729969442025 0.28376163764236123 0.3906176184565768 0.04558462161539909 1.387163806067862e-11 10.857872251348597 0.6041599610477244 EGFGLSENPFASLS(ph)PDEQKDEK ddPTM_A549_MK2206_60min_R1 2 EGFGLSENPFASLSPDEQKDEK 22 1 B4DT96;C9JYA1;O15504-2;O15504 B4DT96 NUPL2 Nucleoporin-like protein 2 1 EGFGLSENPFAS(0.028)LS(0.972)PDEQKDEK;EGFGLS(0.001)ENPFAS(0.199)LS(0.8)PDEQKDEK 130.9 2.6129e-22 9466700.0 2065.41 2480.32 1987.03 1978.5900000000001 2564.31 2280.62 1882.2800000000002 2044.35 3216.5 2592.55 2633.05 True False 2414.0007135736696 2606.5576936967177 2268.8207327461837 2463.344638822282 2187.103395920916 2521.953694646965 2224.2659113730374 2334.1428730592997 2487.9678856950363 2006.891154395828 1979.1910165168958 1.219690617746426 1.316981368621964 1.1463374246407991 1.2446219785078805 1.1050491729544716 1.2742346108084386 1.1238257918568364 1.1793418894792027 1.257063044916967 1.0139956869487416 1.0 10.9506951417584 -10.849348021635116 0.9211251180021581 0.9903254643927925 1.2092119245088562 0.6044733291061304 0.06240588548804587 0.33321367381643485 0.4641701047735871 0.051765970784791886 0.010587977005470905 1.4146596888821568e-11 10.849348021635116 0.21888646011606372 EGFGLSENPFASLS(ph)PDEQKDEK ddPTM_A549_PD325901_60min_R1 1 EGFGLSENPFASLSPDEQKDEK 22 1 B4DT96;C9JYA1;O15504-2;O15504 B4DT96 NUPL2 Nucleoporin-like protein 2 1 EGFGLSENPFAS(0.12)LS(0.88)PDEQKDEK 80.139 3.0947e-05 7797100.0 1394.0 1405.8 1378.0 1366.1 1893.3 1426.8 1751.3 1548.7 1687.2 1772.8 1971.1 True False 1535.5178537914385 1524.2716996555298 1471.5193665871584 1450.4808943617943 1760.321139530418 1415.180613854032 1817.9466798481317 1517.809963568354 1616.2928513960467 1660.8651054520585 1728.6671958323852 0.8882669015142953 0.8817612223627376 0.8512450344027004 0.8390746916808131 1.0183111843473092 0.8186541731490405 1.0516464269299428 0.8780232350261616 0.9349936501905861 0.9607778232017189 1.0 10.755444431758425 -5.764638547947327 0.018127235898794714 1.7648864215669136 3.6920825551731883e-06 0.2173272944807878 0.0659138058327064 1074.281598622798 3.345731712879918 144.34794936830914 183.03364395475901 1.719338752974331e-06 5.764638547947327 -1.7648827294843583 EGFGRQS(ph)MSEK ddPTM_A549_MK2206_60min_R1 2 EGFGRQSMSEK 11 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 EGFGRQS(0.953)MS(0.047)EK;EGFGRQS(0.961)MS(0.039)EK 84.75299999999999 0.00013675 67249000.0 10513.5 12143.5 11103.5 10397.2 15903.300000000001 10010.5 9421.0 9933.900000000001 17417.6 17197.4 17149.0 True False 12287.9217696035 12761.552280917816 12678.143262078202 12944.514466748049 13563.94563697412 11069.80446556789 11132.673752600775 11342.060746292838 13472.541410191785 13312.495395886988 12890.430011677807 0.9532592596578642 0.9900020611691591 0.9835314454671188 1.0041957060409348 1.0522492752131742 0.858761457572745 0.863638663916981 0.8798822642858107 1.045158415815968 1.0327425372021586 1.0 13.654012770895827 -8.788730557702435 24.99778694270542 1.0213248127224623 0.95029793253485 0.25638855996417376 0.058766869174851424 255.05249941199173 233618.18720993595 0.011241535051482262 0.011968933374498761 1.6265575815724335e-09 8.788730557702435 -0.07102688018761238 EGFGRQS(ph)MSEK ddPTM_A549_PD325901_60min_R1 4 EGFGRQSMSEK 11 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 EGFGRQS(0.833)MS(0.167)EK;EGFGRQS(0.939)MS(0.061)EK;EGFGRQS(0.996)MS(0.004)EK;EGFGRQS(0.941)MS(0.059)EK 92.265 8.192799999999999e-05 108680900.0 15124.3 15741.0 16129.0 17563.8 18740.4 20304.1 18916.9 20129.5 20298.5 20645.199999999997 21176.5 True False 16659.707802078814 17067.549313044306 17223.610931556068 18648.67603571605 17424.13895487025 20138.750141402903 19636.792981224873 19728.001331212738 19445.424634935196 19341.658548668114 18571.924748893773 0.8970372229766407 0.9189973330072279 0.9274004264195602 1.0041326511850555 0.938197800737272 1.0843652671273318 1.057337526763053 1.0622486143978063 1.0470333526466316 1.041446097277569 1.0 14.180835719959418 -6.433504809432372 1.1063312745888283 1.0310642015362825 0.9021031441226778 0.7168300016377549 0.03382192549925292 0.26238920131095234 0.5813085429215282 0.005672491709063839 0.023906706209227187 3.685489604717814e-07 6.433504809432372 -0.12896105741360475 EGFGRQS(ph)MSEKR ddPTM_A549_MK2206_60min_R1 2 EGFGRQSMSEKR 12 2 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 EGFGRQS(0.797)MS(0.203)EKR;EGFGRQS(0.953)MS(0.047)EKR 44.925 0.021204 23026000.0 2918.7 3228.5 2972.2 2769.0 4211.7 2578.3 2736.8999999999996 2248.5699999999997 5318.6 5021.3 5165.1 True False 3411.30520463611 3392.816859961559 3393.7026526364525 3447.4051243051326 3592.164509205255 2851.133994662976 3234.159302992572 2567.31168345682 4113.9455920589535 3886.984842555693 3882.4631204919842 0.8786445868940619 0.8738825726518743 0.8741107248963137 0.8879427871727674 0.925228237261416 0.7343621577792815 0.8330173919547086 0.6612584856006285 1.0596225809191038 1.0011646529338147 1.0 11.922756505182964 -8.796221856788376 24.99997235502507 1.0281551628723455 0.8377960459990841 0.562712432276184 0.07314189247910775 89.71472310745307 64482.231735727844 0.012791507418158246 0.013617316413183344 1.5987411124554257e-09 8.796221856788376 -0.19035911687326146 EGFGRQSMS(ph)EK ddPTM_A549_PD325901_60min_R1 1 EGFGRQSMSEK 11 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 EGFGRQS(0.44)MS(0.56)EK 47.843999999999994 0.007143899999999999 39527000.0 6086.4 6075.0 5899.2 6556.2 7228.1 7424.3 6818.4 6868.2 7728.4 7653.5 8581.1 True False 6704.28684742913 6586.961570214355 6299.555186771385 6961.161583789471 6720.423191591302 7363.838962318824 7077.877943171646 6731.208363001334 7403.602224234947 7170.256703845516 7525.679100074717 0.8908547332775015 0.8752647412442762 0.8370746484139672 0.9249878304963014 0.8929989044476505 0.9784949456914411 0.9404969105181982 0.8944320204849692 0.9837786232688878 0.952772050003345 1.0 12.877606057910405 -7.552241510454603 0.3444366266958177 1.0050885192518852 0.8497757113137201 0.5083028417426986 0.0342744010317672 0.692130693582401 0.16817481085881242 0.014699824513988597 0.03917566296811037 2.8038739745746213e-08 7.552241510454603 -0.15531280793816515 EGFLAESS(ph)PQTQR ddPTM_A549_MK2206_60min_R1 2 EGFLAESSPQTQR 13 0 K7ELU8;F6WF08;Q6ZW76;K7ERF3;D3DUE4;Q6ZW76-2 K7ELU8 ANKS3 Ankyrin repeat and SAM domain-containing protein 3 1 EGFLAES(0.485)S(0.515)PQTQR;EGFLAES(0.196)S(0.804)PQTQR 131.32 3.91e-08 5596300.0 2635.4 2883.0 2848.1 1622.62 3735.0 3527.4 2845.8999999999996 2900.4 4026.8999999999996 3727.0 3858.7 True False 3080.1910906561156 3029.732385711372 3252.003406558737 2020.1619728421795 3185.5864477245814 3900.6671267013835 3362.9631920737215 3311.5405821024724 3114.8135796379106 2885.0681114860836 2900.4782952977516 1.0619597104552425 1.044563026250935 1.1211955668935283 0.696492704709172 1.0982969439519843 1.3448358269134906 1.1594512524109384 1.1417222419733786 1.0738965310264996 0.994687019779927 1.0 11.502075108128825 -4.944383120575359 14.313160908545688 1.057853450798709 1.087586387572078 0.0 0.14884876274638661 21909257.06455341 160356463.9344135 0.020209769085064572 17982605.718837034 1.1366241502800248e-05 4.944383120575359 0.029732936773368968 EGGEGFTVDT(ph)PAK ddPTM_A549_MK2206_60min_R1 1 EGGEGFTVDTPAK 13 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EGGEGFT(0.011)VDT(0.989)PAK 101.97 0.00014569 7227500.0 2679.8 3011.4 2515.9 3777.7 3962.8 3471.7 3266.9 3186.3 4238.4 4864.8 4526.9 True False 3132.0847251803375 3164.6673972706294 2872.692451304774 4703.236669587398 3379.877369489418 3839.0729896720522 3860.453442561455 3637.967782634504 3278.4091673340095 3765.838301249664 3402.7457939159276 0.9204580403215753 0.9300334462036571 0.8442277576071409 1.3821886659875486 0.993279420264835 1.1282279729905986 1.1345112671842557 1.0691271117399221 0.9634599132253044 1.1067057398125189 1.0 11.732483661778863 -2.760065672674026 16.789873558130623 1.0151490920635458 0.36120782344530256 0.0 0.14201574083984733 0.0 0.0 0.01768142625938367 0.0 0.0017375380637278401 2.760065672674026 -0.6539412686182432 EGGGVHAVPPDPEDEGLEETGSKDKDQPPS(ph)PSPPPQSEALSSTSR ddPTM_A549_MK2206_60min_R1 1 EGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEALSSTSR 45 2 H3BU99;H3BPL8;H3BR21;H3BUX9;Q7L1V2 H3BU99 MON1B Vacuolar fusion protein MON1 homolog B 1 EGGGVHAVPPDPEDEGLEET(0.041)GS(0.041)KDKDQPPS(0.775)PS(0.142)PPPQSEALSSTSR 56.75 0.00038681 25747000.0 798.27 714.31 623.73 819.52 734.28 703.08 571.92 688.26 1111.7 1015.8 969.35 True False 932.9984601722916 750.6653279353076 712.1842929577192 1020.3024367896502 626.2683846948345 777.4794589332677 675.83046094761 785.8229627078504 859.9017250201059 786.3300744962611 728.6336423010024 1.2804767801084664 1.0302369865392569 0.9774243894485346 1.4002955361319398 0.859510662611046 1.0670375533004648 0.927531233410193 1.0784884434188982 1.1801564944277936 1.079184419776522 1.0 9.509049798169057 -5.254050596015121 23.505054980264614 1.0714793607866204 1.2804770168467874 0.17554435106766453 0.13530013509123853 523.4133107692962 1664970.572082695 0.01778365508679147 0.24468806556946315 5.571208396649558e-06 5.254050596015121 0.20899765606016696 EGGGVHAVPPDPEDEGLEETGSKDKDQPPSPS(ph)PPPQSEALSSTSR ddPTM_A549_MK2206_60min_R1 1 EGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEALSSTSR 45 2 H3BU99;H3BPL8;H3BR21;H3BUX9;Q7L1V2 H3BU99 MON1B Vacuolar fusion protein MON1 homolog B 1 EGGGVHAVPPDPEDEGLEET(0.004)GS(0.004)KDKDQPPS(0.144)PS(0.822)PPPQS(0.003)EALS(0.005)S(0.005)T(0.005)S(0.005)R 88.538 6.538800000000002e-11 27077000.0 1204.1 1446.9 1242.8 1156.8 2066.8 1267.8 1286.9 1477.9 2461.7 1865.1 2068.7 True False 1407.322642581403 1520.541029790422 1419.0477278435444 1440.2160519307254 1762.776457873404 1401.9577545024708 1520.7130720965845 1687.3968508789283 1904.1288805271165 1443.7726146317934 1554.9846967845276 0.9050395450781816 0.9778495138470945 0.912579867041727 0.9261930711658279 1.1336294572664016 0.901589422327761 0.9779601530749391 1.0851533486909606 1.2245322313875924 0.928480272260747 1.0 10.602684666958988 -8.274554285066674 4.422472993793276 1.1080736086994871 0.9629794493580488 0.13463676286789017 0.09442652456050708 0.18540201701343792 9.344618977169086 0.01604423666183246 0.020036720254433572 5.314295687923811e-09 8.274554285066674 -0.14509415934143832 EGGKPPT(ph)PPPK ddPTM_A549_MK2206_60min_R1 2 EGGKPPTPPPK 11 1 Q8TD55-2;Q8TD55 Q8TD55-2 PLEKHO2 Pleckstrin homology domain-containing family O member 2 1 EGGKPPT(1)PPPK;EGGKPPT(1)PPPK 60.448 0.0032911999999999998 31797000.0 9273.1 9929.8 8632.7 8198.6 12433.8 9876.099999999999 7886.6 9678.5 12601.099999999999 13171.0 14518.400000000001 True False 10838.172574471899 10435.184406395 9856.946668937042 10207.25736804914 10604.804490955255 10921.182346775395 9319.493134196073 11050.45701416314 9746.970969821761 10195.661952343231 10913.080592544353 0.9931359420067299 0.956208864939947 0.9032231170061326 0.9353231914206315 0.9717516883546423 1.0007423892971685 0.8539745542210149 1.012588234866756 0.8931456967779328 0.9342606669017682 1.0 13.413770789024127 -11.155459466296705 1.5478386848948922 0.9999371351862749 0.9391258847637575 0.0 0.05053517671901466 0.5361992182520348 2.307853155672408 0.03295586685655369 0.007045620730086087 6.991019825138032e-12 11.155459466296705 -0.06081125042251745 EGGKPPT(ph)PPPK ddPTM_A549_PD325901_60min_R1 2 EGGKPPTPPPK 11 1 Q8TD55-2;Q8TD55 Q8TD55-2 PLEKHO2 Pleckstrin homology domain-containing family O member 2 1 EGGKPPT(1)PPPK;EGGKPPT(1)PPPK 49.928999999999995 0.010873 70445000.0 13084.5 13569.3 14998.2 14663.6 17019.800000000003 16088.9 15685.3 15573.1 16506.9 15867.9 17542.3 True False 14412.8288077002 14712.832532462498 16016.068043503288 15569.33726854814 15824.387963122483 15957.877332657796 16282.2126748255 15262.482303639394 15813.172397291015 14865.998085967236 15384.708309801854 0.9368282139296426 0.9563283382557671 1.0410381348146318 1.0120008098319717 1.0285790048447327 1.0372557614557285 1.0583374313604523 0.9920553575861697 1.0278499974689919 0.9662840390997768 1.0 13.909209470345273 -5.656801660242447 5.382126132344375 1.0188966328085847 0.9420131005025616 0.5652058663264029 0.02436478061476487 0.08441923371812636 3.6270023345156943 0.002716994012836372 0.011027728853538105 2.2039327564907476e-06 5.656801660242447 -0.07688353230602307 EGGS(ph)KSDSEDITR ddPTM_A549_PD325901_60min_R1 1 EGGSKSDSEDITR 13 1 E9PDC4;F5GYS8;H0YNY8;U3KPR8;O00470;O00470-2 E9PDC4 MEIS1 Homeobox protein Meis1 1 EGGS(0.57)KS(0.424)DS(0.005)EDIT(0.001)R 61.815 0.0020563 22207000.0 5171.8 5216.9 5380.2 5251.9 6118.6 5133.3 5652.2 5964.1 6358.0 6385.5 6215.2 True False 5696.837328722067 5656.546471712144 5745.332725770849 5576.297935069692 5688.85064402409 5091.496106740188 5867.297564002517 5845.141346754064 6090.795370540582 5982.318440243755 5450.769801398931 1.0451436285678368 1.0377518548408338 1.0540406098779513 1.0230294322168119 1.0436783887963963 0.9340875311654996 1.0764163187549554 1.0723515319347954 1.1174192990093599 1.097518086107471 1.0 12.41224427789732 EGGSKS(ph)DSEDITR ddPTM_A549_MK2206_60min_R1 2 EGGSKSDSEDITR 13 1 E9PDC4;F5GYS8;H0YNY8;U3KPR8;O00470;O00470-2 E9PDC4 MEIS1 Homeobox protein Meis1 1 EGGS(0.466)KS(0.531)DS(0.003)EDITR;EGGS(0.195)KS(0.801)DS(0.003)EDITR 70.80199999999999 0.00072092 36271000.0 5993.1 6038.2 5792.2 5617.7 7547.6 6609.700000000001 5850.299999999999 6680.799999999999 8621.2 8874.3 7605.900000000001 True False 7004.588762772695 6345.518588762548 6613.621056658654 6994.036752188133 6437.358038245259 7309.134066836237 6913.223782490209 7627.823859091918 6668.511965227437 6869.589466530979 5717.145117838955 1.2251899537964475 1.1099103587493182 1.1568048248456149 1.2233442755134811 1.1259742241208912 1.2784587265469034 1.20920907900679 1.3342015467284811 1.166405929494421 1.2015768928264743 1.0 12.481079195211782 -10.137443673362158 0.8912745225555798 1.0130680873448452 1.2018949206427991 0.027023856330493534 0.0838192614468878 0.2833840603222517 0.44725995909587896 0.02859905903287951 0.012586391543008694 7.287126801431301e-11 10.137443673362158 0.1888268332979539 EGGSKS(ph)DSEDITR ddPTM_A549_PD325901_60min_R1 1 EGGSKSDSEDITR 13 1 E9PDC4;F5GYS8;H0YNY8;U3KPR8;O00470;O00470-2 E9PDC4 MEIS1 Homeobox protein Meis1 1 EGGS(0.035)KS(0.754)DS(0.21)EDIT(0.002)R 60.528 0.0022475999999999998 23732000.0 4425.7 4851.2 4761.4 4830.6 5725.3 4952.9 4273.9 4839.4 4878.6 4902.1 5825.6 True False 4874.99380597186 5260.027649287878 5084.537236624162 5128.9751909114175 5323.174679212747 4912.565224528758 4436.545603267819 4742.87437056414 4673.569407788498 4592.580569402383 5109.088131521049 0.9541808010504027 1.0295433380441399 0.9951946620874638 1.0038924870502182 1.0419030837168122 0.9615346414206828 0.8683634905211541 0.928321111022236 0.9147560753462888 0.8989041588591868 1.0 12.318850107033427 -7.501622744079792 24.175993297030086 0.9481278823698245 1.0053105773348778 0.4387169787487478 0.0400305229060761 537.8080222654032 611688.4396799284 0.006823857690048478 0.010837060392017721 3.150483837249251e-08 7.501622744079792 0.05718269496505335 EGHLS(ph)PDIVAEQK ddPTM_A549_MK2206_60min_R1 4 EGHLSPDIVAEQK 13 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 1 EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK 203.85 8.318700000000001e-31 380052000.0 14897.099999999999 15074.800000000001 12338.7 11628.8 17712.6 14252.400000000001 12593.3 13510.0 18763.8 18445.8 17947.5 True False 17411.366280873186 15842.042930323207 14088.51319564141 14477.856522036662 15107.100003739337 15760.579508022556 14881.339599684463 15425.08387263978 14513.82925963143 14278.88096883552 13490.640424198933 1.2906256288353386 1.1742988051113148 1.0443175974337022 1.0731778527034863 1.1198208186351826 1.1682602910201285 1.103086223615519 1.1433915209074081 1.0758443486194431 1.0584286972190493 1.0 13.719671216707763 -2.8864405844747125 0.017901889423390365 4.894828509506136e-07 2.463403226914154 0.3970189773426229 0.058698288889648155 1603.273234533169 2.4867514150681873 134.9074407520786 216.1402958299584 0.0012988512466080727 2.8864405844747125 2.463402737431303 EGHLS(ph)PDIVAEQK ddPTM_A549_PD325901_60min_R1 2 EGHLSPDIVAEQK 13 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 1 EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK 161.45 3.7665e-19 446070000.0 8753.400000000001 7961.799999999999 8078.9 8312.9 9643.900000000001 8399.7 8347.5 5062.6 9603.3 9177.4 9881.4 True False 9642.038724087499 8632.768827939533 8627.182736372277 8826.368953034304 8966.54573364886 8331.29562811166 8665.168680427272 4961.622471467133 9199.706697375335 8597.937397775122 8666.050443355554 1.1126220401221245 0.9961595405388461 0.9955149456794268 1.0184996049499884 1.0346749989810757 0.96137169781875 0.9998982508890243 0.5725356093757007 1.0615801001284209 0.9921402435832051 1.0 13.081158918937124 -7.245925833211696 22.301529995835445 0.9850477564476632 1.0268104225215544 0.05056240306639592 0.13020678619492926 864.5937301231384 1242891.820557519 0.020159902273127365 0.03480336312002363 5.6764153630861864e-08 7.245925833211696 0.04176266607389123 EGHSLEMENENLVENGADS(ph)DEDDNSFLK ddPTM_A549_MK2206_60min_R1 3 EGHSLEMENENLVENGADSDEDDNSFLK 28 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK 140.8 7.8306e-36 28004800.0 3421.72 3896.27 3569.8 2922.2799999999997 4602.13 3599.69 3926.31 3757.11 5815.3 4599.9 4988.6 True False 3999.2226829778574 4094.573500685278 4076.051318680307 3638.2387311861357 3925.162773404747 3980.606806519163 4639.669704020159 4289.691848166814 4498.143835125865 3560.779395230703 3749.792941644172 1.066518270532644 1.0919465592918658 1.087007038018766 0.9702505679129251 1.0467678707837347 1.0615537626922371 1.2373135733691478 1.143980991730683 1.1995712577008488 0.9495936044056362 1.0 11.872595218854476 -7.552443139932926 24.99921035571741 1.1125872695849262 1.052249712427706 0.0903021438345828 0.08151557150256826 388.74784190263165 328717.70092549146 0.013526910047213046 0.020063827087862748 2.8025725248559083e-08 7.552443139932926 -0.06033755715722022 EGHSLEMENENLVENGADS(ph)DEDDNSFLK ddPTM_A549_PD325901_60min_R1 2 EGHSLEMENENLVENGADSDEDDNSFLK 28 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK 133.95 7.3531e-28 132223000.0 2860.3 2892.8999999999996 3098.8999999999996 3250.3 3315.0 2873.0 3005.7 3052.1 3422.5 3253.1 3451.3 True False 3150.6755503584313 3136.6948356334333 3309.2099891995235 3451.0636490331162 3082.165836129156 2849.603240540115 3120.08355828215 2991.223471173868 3278.66422706435 3047.6987108224794 3026.811979593278 1.0409221225501417 1.036303165436434 1.0932988277799112 1.140164527000731 1.01828784110446 0.9414536680018774 1.0308151214273327 0.9882422467403501 1.0832071001334262 1.0069005710860204 1.0 11.563583344851242 EGIILFK ddPTM_A549_MK2206_60min_R1 2 EGIILFK 7 0 P05455 P05455 SSB Lupus La protein 0 ; 96.964 0.0099829 1126600.0 733.6 879.69 735.65 569.12 1189.7 938.32 803.42 1094.1 1516.8 1157.4 1374.2 False True 857.4137452019909 924.462463540214 839.9762318861468 708.5544255487679 1014.6967059860598 1037.612399593594 949.3910143630728 1249.1920255407235 1173.2472218318762 895.9425361507899 1032.948214009426 0.8300645991476264 0.8949746473270711 0.8131832946646459 0.685953483377921 0.982330665007375 1.0045154108607863 0.9191080457731536 1.2093462272343154 1.135823854400091 0.8673644273735238 1.0 10.012552212374688 -7.243840125865441 1.4698942461706188 1.06977536862843 0.8167837455278816 0.43333934515360806 0.10667399419185614 0.21248633913988701 0.8976208270807874 0.01508611426682812 0.02996334231415093 5.703742019563922e-08 7.243840125865441 -0.25299162310054835 EGITGPPADSSKPIGPDDAIDALS(ph)SDFTCGSPTAAGKK ddPTM_A549_MK2206_60min_R1 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGKK 38 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0YA91 P20810-6 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALS(0.264)S(0.264)DFT(0.233)CGS(0.206)PT(0.032)AAGKK 76.55199999999999 2.5646e-06 19970000.0 469.4 745.57 403.34 356.68 706.69 709.3 777.45 647.02 810.08 868.41 754.48 True False 548.6232442718299 783.516328413052 460.5396769781262 444.0666160119737 602.7368371465824 784.3576552047657 918.7026015241979 738.7370664156465 626.5981734319402 672.2355778630617 567.1217934113172 0.9673816993908558 1.3815662482305455 0.8120648550779813 0.7830180768417497 1.062799638717877 1.3830497510715367 1.6199388071441811 1.3026074381166686 1.104874086504178 1.1853460503068844 1.0 9.147514787167285 -4.992749765801079 18.293980610086884 1.109625714665584 0.7745183407763311 0.00887266731878944 0.24523743631435282 67068260.68186771 1969516516.0167415 0.0353852293661244 538747069.5480016 1.0168344093931918e-05 4.992749765801079 -0.3351073738892528 EGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A549_MK2206_60min_R1 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 37 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0YA91 P20810-6 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALS(0.002)S(0.002)DFT(0.012)CGS(0.8)PT(0.184)AAGK 120.86 2.9513e-21 7641000.0 717.72 1075.8 851.18 1068.6 1155.0 1161.4 1195.8 1067.1 1396.7 986.96 1530.1 True False 838.8535894307149 1130.5536248866783 971.8901230977375 1330.4070479712766 985.1010300192481 1284.2985771250742 1413.0613813140853 1218.3646928566916 1080.3496800715868 764.005050526511 1150.133941388315 0.7293529555506755 0.9829756206672752 0.8450234256408248 1.1567409673740745 0.8565098329592314 1.1166513141719916 1.2286059305478745 1.0593241787004528 0.9393251004900418 0.6642748492443309 1.0 10.16758616785292 -4.584015731693113 1.0791108024093874 1.0047946485202432 2.2180762098825732e-17 0.1845987600500335 0.1521671586906858 5.885886563257046 1.9139880597024808 0.016658603302692095 9.659454313782495 2.6060591475438724e-05 4.584015731693113 -1.0047946485202432 EGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A549_PD325901_60min_R1 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 37 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0YA91 P20810-6 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALSSDFT(0.001)CGS(0.976)PT(0.023)AAGK 150.94 2.5180999999999998e-40 14171000.0 1683.7 1651.1 1645.4 1353.4 1553.9 2192.0 1266.5 1722.1 1866.2 1520.5 2060.1 True False 1854.62798452557 1790.2439915359546 1757.0667385939842 1436.9964442055866 1444.7594246639806 2174.1490787552843 1314.6973505553926 1687.7513645386841 1787.7701038853147 1424.495370509847 1806.7207600498693 1.026516119997635 0.9908802904808267 0.9725170471531447 0.7953616718091635 0.7996583958132535 1.20336751911528 0.7276704732828244 0.9341517526438887 0.9895110209703731 0.7884424654923032 1.0 10.819157830586912 -8.762361987402222 5.760849096931547 0.9952374682604775 0.9278151658633075 0.0 0.13766968750249653 0.3753911373648265 42.22417472767294 0.020246322424219258 0.022177216521152877 1.7283751462373461e-09 8.762361987402222 -0.06742230239717006 EGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGKK ddPTM_A549_PD325901_60min_R1 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGKK 38 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0YA91 P20810-6 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGS(0.98)PT(0.02)AAGKK 321.04 5.6126999999999965e-258 44287000.0 4082.2 4428.6 5466.7 4417.6 4920.0 5937.5 5952.0 7065.4 4328.8 5679.7 5620.0 True False 4496.621938843194 4801.813664173049 5837.703135937605 4690.465118902469 4574.436173078566 5889.146968571854 6178.506617059371 6924.475054300926 4146.875589807494 5321.082772696333 4928.775628115267 0.9123202754844562 0.9742406687742109 1.1844124335134132 0.9516491463207615 0.9281080167221574 1.19484988015651 1.2535581010860486 1.404907745201784 0.8413601881474231 1.0795952533004798 1.0 12.267013591584563 EGIVKQDS(ph)LVINLNR ddPTM_A549_MK2206_60min_R1 1 EGIVKQDSLVINLNR 15 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 EGIVKQDS(1)LVINLNR 80.975 0.00010159 3178800.0 1493.3 1556.6 1556.1 1263.1 2005.4 1551.4 1505.3 1563.0 1933.1 2157.4 1755.5 True False 1745.3325323202464 1635.8242912238366 1776.7783789003372 1572.559556702713 1710.4083165373154 1715.568118264026 1778.7935250811945 1784.5600364867475 1495.2559365263712 1670.0418416206282 1319.5609006647849 1.3226616001133111 1.239673205230407 1.3464921384115047 1.1917294275015797 1.2961950567614005 1.3001052982092267 1.3480192723087292 1.3523892952479113 1.1331465912433996 1.2656042178722284 1.0 10.3658422204415 -9.095525975701843 1.696243909654379 1.0437734805638275 1.2967808641668979 0.3142603802618471 0.08614280733478222 0.10457581139898119 0.6165306977299009 0.012145320230321152 0.011559896061231086 8.025535576944876e-10 9.095525975701843 0.2530073836030704 EGIVKQDS(ph)LVINLNR ddPTM_A549_PD325901_60min_R1 1 EGIVKQDSLVINLNR 15 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 EGIVKQDS(1)LVINLNR 70.414 0.00052429 4608900.0 2450.7 2144.8 2130.2 1943.5 2870.6 2358.7 1809.7 2345.9 2550.3 2354.7 2706.5 True False 2699.493259890012 2325.549823176255 2274.7681819332106 2063.545580991251 2668.978959032385 2339.491529224493 1878.5691238058384 2299.1091841770517 2443.119759907147 2206.023840144385 2373.6176579170765 1.1372906882816591 0.9797491248936012 0.9583549289607959 0.8693673027365648 1.1244350791418096 0.9856227355830636 0.7914371202708111 0.9686097407088687 1.029281085670327 0.9293930860289603 1.0 11.212871849190917 -8.750347129192269 23.53644504502366 1.0138271779726569 0.9717855393781281 0.0 0.09615960707878907 299.9492005430156 636453.8361161432 0.015525592699916975 0.017511361650475347 1.7768586089757424e-09 8.750347129192269 -0.04204163859452881 EGIVTATEQEVKEDIAK ddPTM_A549_PD325901_60min_R1 2 EGIVTATEQEVKEDIAK 17 1 I3L0K7;Q12931-2;Q12931 I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial 0 ; 82.59 0.00018385 1706250.0 2066.3599999999997 1642.3200000000002 1896.8 1971.31 2243.7 2574.6000000000004 2122.8 2072.8999999999996 1834.26 2314.4 1961.96 False True 2276.1353460261676 1780.7240701225412 2025.5282543849935 2093.0733415301584 2086.1102523447944 2553.6333112059096 2203.584315640732 2031.554383341408 1757.1724310109735 2168.268389022024 1720.6513578891509 1.3228335511375586 1.034912774141001 1.1771869095374774 1.2164424431093843 1.2123956679428531 1.4841085031535028 1.2806686872022872 1.1806891465994975 1.0212251441608866 1.260143944373483 1.0 10.748739089652751 -8.687177233602938 3.255093264944295 1.0086780234307493 1.2422756266339823 0.1338673704693264 0.1274992224692796 0.15018816380738018 3.172681316131788 0.018658657234759884 0.020826102247780958 2.055051767554575e-09 8.687177233602938 0.23359760320323297 EGKDVNSS(ph)SPVMLAFK ddPTM_A549_MK2206_60min_R1 1 EGKDVNSSSPVMLAFK 16 1 Q99598;Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8 Q99598 TSNAX;TRAX;DISC1 Translin-associated protein X 1 EGKDVNS(0.081)S(0.459)S(0.459)PVMLAFK 52.784 0.0038411 3646100.0 2502.8 3073.4 2653.8 2554.2 3434.7 2760.6 2290.9 2445.9 3887.2 3347.0 3497.8 True False 2925.2114524148615 3229.822932447221 3030.148744891532 3179.979114662394 2929.4601799195766 3052.724859662028 2707.126876110084 2792.613815254599 3006.7554065828535 2590.9103754075472 2629.199725631035 1.112586245882397 1.2284433552008036 1.1524985018641993 1.209485564623344 1.1142022233462983 1.1610851887371707 1.029639114031303 1.062153547343895 1.1436009890276408 0.985436880336545 1.0 11.360408024272227 -7.744917198995482 23.238417007694906 1.066417038319811 1.1654333839845403 0.5472636286048973 0.05205913405247598 82.77264714390357 116418.55794104692 0.00905880006301331 0.013408884791845136 1.799213914003634e-08 7.744917198995482 0.09901634566472928 EGKDVNSS(ph)SPVMLAFK ddPTM_A549_PD325901_60min_R1 1 EGKDVNSSSPVMLAFK 16 1 Q99598;Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8 Q99598 TSNAX;TRAX;DISC1 Translin-associated protein X 1 EGKDVNS(0.066)S(0.526)S(0.407)PVMLAFK 62.765 0.00080794 6626500.0 3018.7 3339.6 3636.8 3270.8 4491.7 3707.0 3848.7 3598.3 3769.4 3689.0 3892.7 True False 3325.1562017505144 3621.039812327219 3883.6151178549894 3472.8298874742395 4176.218487523781 3676.8114210519316 3995.164384589451 3526.529083688259 3610.985226441596 3456.0759104313233 3413.9225778584178 0.9739987143576093 1.0606684040851118 1.1375814856033477 1.0172550221255383 1.2232903331227734 1.0770049224017335 1.1702562941821752 1.0329844931341357 1.057723233051992 1.0123474776042956 1.0 11.737214625451214 -9.451428520720901 0.8159859453537847 1.0101835882783972 1.092359023390805 0.1747638097317138 0.06708677682150922 0.6144317354316138 0.8777028279952697 0.020860885428855745 0.014295809881145235 3.536482222539573e-10 9.451428520720901 0.08217543511240777 EGKDVNSSS(ph)PVMLAFK ddPTM_A549_MK2206_60min_R1 3 EGKDVNSSSPVMLAFK 16 1 Q99598;Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8 Q99598 TSNAX;TRAX;DISC1 Translin-associated protein X 1 EGKDVNS(0.03)S(0.177)S(0.792)PVMLAFK;EGKDVNS(0.015)S(0.154)S(0.83)PVMLAFK;EGKDVNS(0.035)S(0.219)S(0.746)PVMLAFK 97.28399999999999 1.1395999999999999e-06 12833800.0 6825.4 7430.4 7349.4 7087.7 9801.2 7421.900000000001 7003.800000000001 6534.700000000001 11038.0 10562.6 10994.9 True False 7977.360654991366 7808.575622195558 8391.655432099566 8824.186818178949 8359.456463571129 8207.28053174151 8276.299801344367 7461.013736679433 8537.910624063987 8176.5013239557 8264.562886197231 0.9652489508325327 0.9448262091679133 1.0153780118383022 1.0677136758093224 1.0114819838242601 0.9930689190409102 1.0014201495358863 0.9027717302678141 1.0330746757730258 0.989344679996494 1.0 13.012722801869682 -5.763986364478122 24.983046329638533 1.0091217356691526 0.9550375704189675 0.156420731950353 0.038567161771189636 68.02540365668837 667288.7382561528 0.005355650154234945 0.01787798321147331 1.7219226372552382e-06 5.763986364478122 -0.05408416525018511 EGKDVNSSS(ph)PVMLAFK ddPTM_A549_PD325901_60min_R1 2 EGKDVNSSSPVMLAFK 16 1 Q99598;Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8 Q99598 TSNAX;TRAX;DISC1 Translin-associated protein X 1 EGKDVNS(0.017)S(0.116)S(0.867)PVMLAFK;EGKDVNS(0.019)S(0.125)S(0.856)PVMLAFK 99.09200000000001 6.6592e-07 11691800.0 7228.0 7180.700000000001 7254.7 8308.9 9566.9 9174.1 7762.9 9166.2 10192.8 8346.8 9193.3 True False 7961.781239027631 7785.842789668839 7747.0475680550535 8822.121882118967 8894.953948013286 9099.38917126316 8058.321407521878 8983.372950255203 9764.432062416807 7819.781623526203 8062.58238113026 0.9874976605090517 0.9656760603018327 0.9608642990347998 1.0942054871608307 1.1032388293893425 1.1285948770656224 0.9994715125493349 1.114205415287287 1.211079974236241 0.9698854850559654 1.0 12.97702628120049 -6.2654791411354065 22.604423560184703 1.0975731958515604 0.9707789958779323 0.2999212922198582 0.06743258010776927 77.92990239170743 436064.5174758067 0.011078658197085672 0.026708794327971876 5.426513138716658e-07 6.2654791411354065 -0.12679419997362817 EGKPEIEGKPES(ph)EGEPGSETR ddPTM_A549_MK2206_60min_R1 4 EGKPEIEGKPESEGEPGSETR 21 2 D6RD44;Q96EI5;Q96EI5-2 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 EGKPEIEGKPES(1)EGEPGSETR;EGKPEIEGKPES(0.944)EGEPGS(0.056)ETR;EGKPEIEGKPES(0.899)EGEPGS(0.1)ETR;EGKPEIEGKPES(1)EGEPGSETR 139.19 8.137200000000001e-19 239189000.0 27757.6 30464.0 31667.7 27820.7 40593.9 32705.7 29537.3 30206.0 46369.7 45781.399999999994 43775.8 True False 32442.40427183585 32014.487477735427 36158.65604363614 34636.77274891868 34622.59108441416 36166.59546571341 34903.84507299592 34487.79300199536 35867.036987195126 35439.3499434368 32905.060709382786 0.985939657074846 0.9729350679668124 1.0988782656561276 1.0526275290852785 1.0521965417478056 1.0991195483617695 1.060743980424968 1.0480999657344883 1.0900158277771461 1.0770182208881738 1.0 15.006021863171348 -5.740437579565496 24.953384200228488 1.0528011667443509 0.9794372887109878 0.5352791831589551 0.028916812058230136 189.82111766072475 225533.17358531622 0.005080918318918793 0.01963855315412996 1.8178683165552272e-06 5.740437579565496 -0.07336387803336308 EGKPEIEGKPES(ph)EGEPGSETR ddPTM_A549_PD325901_60min_R1 4 EGKPEIEGKPESEGEPGSETR 21 2 D6RD44;Q96EI5;Q96EI5-2 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 EGKPEIEGKPES(1)EGEPGSETR;EGKPEIEGKPES(0.991)EGEPGS(0.009)ETR;EGKPEIEGKPES(0.999)EGEPGS(0.001)ETR;EGKPEIEGKPES(1)EGEPGSETR 146.57 3.2997000000000004e-22 188391000.0 25988.300000000003 24758.3 26070.700000000004 25596.5 28913.300000000003 27880.9 28727.9 28408.8 28488.600000000002 29053.399999999998 30518.5 True False 28626.613084424724 26844.76883026141 27840.014477854744 27177.537671130736 26882.529553470045 27653.84719428295 29821.15595501007 27842.164197727547 27291.323213775162 27218.96336571575 26764.917972711 1.0695572881490567 1.0029834149924102 1.040168122549073 1.0154164379969495 1.004394244020436 1.033212476962503 1.1141882065700763 1.040248441116647 1.0196677322755436 1.0169641989363722 1.0 14.708055610736098 -9.12174548196416 2.082180270951004 1.006930126659143 1.0386304772485875 0.14355523923739966 0.03002773257577865 0.3828213945039616 3.4212338174495573 0.00617433191120356 0.005898723195775585 7.555348787340341e-10 9.12174548196416 0.031700350589444426 EGLDISHLQGQEELLS(ph)SQEK ddPTM_A549_PD325901_60min_R1 2 EGLDISHLQGQEELLSSQEK 20 0 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 EGLDISHLQGQEELLS(0.5)S(0.5)QEK;EGLDISHLQGQEELLS(0.887)S(0.113)QEK 189.51 1.6492e-44 16089100.0 4191.0 3677.9 3998.3999999999996 3684.9 4359.5 3333.3999999999996 4022.5 3687.2 3910.2 3909.5 3996.8 True False 4616.467234748868 3987.8495405911704 4269.755468332432 3912.507903984905 4053.303759458539 3306.2538955852483 4175.578438696457 3613.655903447557 3745.8678920867824 3662.653502800554 3505.2189378026883 1.3170267868182826 1.1376891461995318 1.218113773802959 1.1161950147506432 1.156362507273063 0.9432374850906845 1.1912461140912345 1.0309358609459198 1.0686544716761541 1.0449143313988132 1.0 11.77528884319687 -2.0000000000000004 0.2302886627304064 1.013336214710001 2.501708886312474 0.5675553970536613 0.06758599606359984 21.951976029408147 0.25949072922334293 0.03442674516481905 12.506490063851253 0.00999999999999999 2.0000000000000004 1.488372671602473 EGLDISHLQGQEELLSS(ph)QEKSPGTK ddPTM_A549_PD325901_60min_R1 1 EGLDISHLQGQEELLSSQEKSPGTK 25 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 EGLDISHLQGQEELLS(0.153)S(0.839)QEKS(0.005)PGT(0.002)K 159.59 8.299299999999999e-41 4954600.0 2013.7 1711.1 1889.9 2032.4 2241.5 1745.1 1651.5 1972.4 2244.6 2044.1 2230.9 True False 2218.1293415924097 1855.3004021059714 2018.1599788919225 2157.936732084701 2084.0647727552064 1730.8884841860615 1714.3487362354765 1933.0589346821343 2150.2672678067597 1915.0351771517114 1956.5134428402757 1.1337153596922622 0.9482686709336517 1.0315083631432425 1.102950117711442 1.0651931783968547 0.8846800876938142 0.8762264028949128 0.988012089442078 1.0990301526807866 0.9787999076416515 1.0 10.93406930742437 -3.92273709871214 15.54934134856192 1.0260439842233582 1.0169779919767288 0.0 0.0837919247966137 0.0 0.0 0.011470252431213288 0.0 0.00011947111070650567 3.92273709871214 -0.009065992246629406 EGLELLK ddPTM_A549_MK2206_60min_R1 2 EGLELLK 7 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 100.45 0.031091000000000004 33146000.0 4458.700000000001 4081.6000000000004 4142.5 4025.4 5621.1 4386.1 4124.5 4585.7 6167.799999999999 5266.0 5166.3 False True 5211.219555250975 4289.336006076843 4729.968790305664 5011.623180707071 4794.2436362261415 4850.234190742458 4873.868261607248 5235.737018117263 4770.803147952693 4076.4069426041615 3883.365127373668 1.3419339630253462 1.1045410012675614 1.2180077420390691 1.290536175797728 1.2345590689970745 1.2489771194970498 1.2550630965014253 1.3482474210861053 1.2285229411789051 1.0497099316955159 1.0 11.923091645446016 -10.378528761047123 0.7827628960777802 1.0017596967661806 1.2497758515315682 0.6462828193358962 0.06427372099531416 0.28384381037664086 0.3205965983179454 0.03976594328832191 0.012465011447766284 4.1828398697827173e-11 10.378528761047123 0.24801615476538763 EGLELLK ddPTM_A549_PD325901_60min_R1 2 EGLELLK 7 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 103.92 0.028369 55783000.0 5310.200000000001 4905.200000000001 4478.3 4456.7 6259.0 4768.2 4727.7 5061.9 6080.2 5137.6 5275.1 False True 5849.287594837377 5318.5784188009 4782.224368205569 4731.980237099927 5819.3894323777995 4729.369360091671 4907.615210596707 4960.936433516273 5824.670338465055 4813.211059211697 4626.2961416140315 1.2643564994083292 1.149640718189161 1.0337047655010552 1.0228442132217295 1.257893842988512 1.0222798574329224 1.0608087031982627 1.0723343862257575 1.2590353406197927 1.0404027135047291 1.0 12.175641904367971 -11.195287300494924 1.6329847741803312 1.000140064282252 1.1406007989212397 0.1492868516301471 0.0927820390344136 0.48986131213188794 2.3534782717212543 0.07264937026218597 0.015269383589437418 6.378413929275076e-12 11.195287300494924 0.14046073463898767 EGLELPEDEEEK ddPTM_A549_MK2206_60min_R1 1 EGLELPEDEEEK 12 0 P08238;Q58FF7;Q58FF6;P07900;P07900-2;Q58FG0 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 152.85 3.0714e-12 3734900.0 2107.7 2291.4 1803.1 2262.0 2806.2 2332.4 2426.4 2494.0 2923.5 2994.1 2841.6 False True 2463.4282316824365 2408.0224726392785 2058.806693011501 2816.190101545037 2393.4116973506602 2579.2130198781856 2867.245472169676 2847.5321375546723 2261.3319178701827 2317.730730507241 2135.952295829708 1.1533161281233206 1.127376523034137 0.9638823381173689 1.3184705047221532 1.1205361196612973 1.2075237002782844 1.3423733656260792 1.3331440702651798 1.0586996358885306 1.085104164092261 1.0 11.060663711023489 -8.945068631688233 10.91584045723309 1.0258399199496568 1.1929657710030697 0.2732562842594106 0.10690560496666465 0.45825875570887925 89.20945253919615 0.018995790437534348 0.02016487562647184 1.1348314637419699e-09 8.945068631688233 0.16712585105341282 EGLELPEDEEEKK ddPTM_A549_MK2206_60min_R1 1 EGLELPEDEEEKK 13 1 P08238;Q58FF7;Q58FF6;P07900;P07900-2;Q58FG0 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 80.469 0.0006895 5998600.0 2416.3 2371.9 2004.7 1877.5 3294.7 2311.5 2156.9 2672.1 3244.7 2817.7 3129.0 False True 2824.1123671368205 2492.6195787959773 2288.996604447982 2337.487584284177 2810.0539944626976 2556.101395750482 2548.7808106341786 3050.8783579630444 2509.780630721183 2181.179613022361 2351.9829439932278 1.2007367546390473 1.0597949212012459 0.9732198995294129 0.9938369622339011 1.194759512027647 1.0867856853633042 1.0836731691203614 1.2971515655565184 1.0670913397271684 0.9273790095259473 1.0 11.199661882801667 -9.590227496834565 1.6719830299871536 1.0173676135507475 1.1034011457560455 0.2212143610268713 0.09371683423712228 0.4778254508705253 2.6958424941759427 0.021691060871579963 0.016972219739946132 2.569049682833418e-10 9.590227496834565 0.08603353220529808 EGLELPEDEEEKK ddPTM_A549_PD325901_60min_R1 2 EGLELPEDEEEKK 13 1 P08238;Q58FF7;Q58FF6;P07900;P07900-2;Q58FG0 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ; 87.49799999999999 0.00019587 16371400.0 4773.2 4966.1 4240.1 4601.5 4853.5 4717.4 4400.4 5219.1 5634.1 4417.4 5815.3 False True 5257.771750155878 5384.610675529465 4527.858683792606 4885.72420423527 4512.606903666024 4678.983058448986 4567.859629991272 5115.000956195255 5397.318370110519 4138.484610121801 5100.054966223972 1.0309245262995035 1.0557946357813817 0.8878058596974271 0.9579748133288473 0.8848153468053916 0.9174377706586283 0.8956490979494812 1.0029305546842662 1.058286313746661 0.8114588249596636 1.0 12.316297080583752 -8.47823630397653 8.19062973480741 1.0277002332364802 0.9460989814442953 0.0 0.08439863855754864 0.3046023041503918 51.916348389365886 0.009490274794440427 0.01142013421255021 3.3247859913382957e-09 8.47823630397653 -0.08160125179218491 EGLELPEDEEEKKK ddPTM_A549_MK2206_60min_R1 2 EGLELPEDEEEKKK 14 2 P08238;Q58FF7;P07900;P07900-2;Q58FG0 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ; 112.06 2.6138e-06 33248000.0 8968.6 8951.5 8248.099999999999 8092.799999999999 12004.0 8835.5 8510.0 8849.4 10899.9 11434.3 11883.599999999999 False True 10482.280418782135 9407.093115052156 9417.804605750189 10075.53636329959 10238.227501602647 9770.466745469765 10056.15684477577 10103.82955015088 8431.090053563601 8851.283688533757 8932.574149325003 1.1734893260946775 1.053122309179265 1.054321458553115 1.127954405400705 1.1461676478080294 1.0938019189248016 1.125784871938138 1.1311218223600623 0.9438589495728623 0.9908995481669314 1.0 13.124860269338232 -8.759124459683804 24.999985912883076 0.97348894449989 1.1106148045071988 0.7279254456618004 0.036692156764118126 22.707934570514997 245234.00069427825 0.006658060151580031 0.007374027551461964 1.7413077796160047e-09 8.759124459683804 0.13712586000730886 EGLELPEDEEEKKKQEEK ddPTM_A549_MK2206_60min_R1 2 EGLELPEDEEEKKKQEEK 18 3 P07900;P07900-2;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ; 83.758 3.8693000000000004e-05 21617100.0 2563.51 2238.6800000000003 2728.4 2540.11 3836.2999999999997 2316.87 2576.0 2779.7 3473.8999999999996 3731.7 4063.4 False True 2996.167816197867 2352.619249824606 3115.328146643327 3162.437064029872 3271.985351915882 2562.039645586163 3044.0258557159104 3173.7309874742273 2687.0671966783725 2888.706378221792 3054.34563586516 0.9809524439591415 0.7702531181145168 1.0199658185576934 1.0353893897584694 1.071255758842458 0.838817852014463 0.9966212795211938 1.0390870470608184 0.8797521685581094 0.9457693144815125 1.0 11.576647614293119 -6.936498785795481 0.0023276317504797002 1.8980633683368255 8.293662365362574e-08 0.0 0.09001000655577703 464394.7640398047 305.0429056469401 123265.56245646536 125482.73563512151 1.1574472680894621e-07 6.936498785795481 -1.898063285400202 EGLELPEDEEEKKKQEEK ddPTM_A549_PD325901_60min_R1 2 EGLELPEDEEEKKKQEEK 18 3 P07900;P07900-2;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ; 136.46 1.8866e-13 91601000.0 4732.4 4728.2 5068.5 4499.200000000001 5323.5 5839.299999999999 6017.4 5779.4 5289.6 5726.4 5300.8 False True 5212.829764191252 5126.662007619344 5412.478889366483 4777.105365575423 4949.595725078 5791.7466768137465 6246.395449847626 5664.12533314841 5067.296507079502 5364.834126726462 4648.835204539754 1.1213195423878948 1.1027841990640956 1.164265595838072 1.0275918924616663 1.0646958877450727 1.245848997004217 1.3436474245737506 1.2183966701201172 1.0900142259573118 1.154016843076629 1.0 12.182653569669927 -9.345390442872635 1.6151539926788698 1.0263486767358878 1.1583228309280331 0.060138790104572126 0.09323618404182608 0.32753625449991136 1.7591135232392374 0.021103911425648676 0.01814582553968446 4.5144989580874185e-10 9.345390442872635 0.1319741541921453 EGLKNQS(ph)PTEAEKPASSSLPSSPPPQLLTR ddPTM_A549_PD325901_60min_R1 2 EGLKNQSPTEAEKPASSSLPSSPPPQLLTR 30 2 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 EGLKNQS(0.612)PT(0.388)EAEKPASSSLPSSPPPQLLTR;EGLKNQS(0.5)PT(0.5)EAEKPASSSLPSSPPPQLLTR 133.36 3.1949999999999995e-28 56419000.0 4178.0 4120.200000000001 4000.3 4990.5 5035.8 5554.799999999999 5260.6 5909.9 5621.2 5226.8 4780.8 True False 4602.147484318959 4467.423713843159 4271.784413758061 5298.7518507521645 4682.10278056688 5509.563550488069 5460.795011710774 5792.022408273137 5384.960512249563 4896.778955988735 4192.79190798816 1.0976331726721016 1.065500938725761 1.018840073035679 1.26377649237896 1.1167028756295962 1.3140560446110332 1.3024245256023315 1.3814237709336594 1.2843376514799287 1.1679041229447447 1.0 12.033695514378149 -6.250584222321572 24.15376947757448 1.1851399305615113 1.0611423459062497 0.2672356011411383 0.10758669034661912 768.5447239652583 1710078.1192880487 0.02017496866098069 0.0527770356697486 5.615853600725755e-07 6.250584222321572 -0.12399758465526167 EGLRPGDT(ph)TSTFCGTPNYIAPEILR ddPTM_A549_PD325901_60min_R1 1 EGLRPGDTTSTFCGTPNYIAPEILR 25 1 P41743 P41743 PRKCI Protein kinase C iota type 1 EGLRPGDT(0.283)T(0.243)S(0.209)T(0.209)FCGT(0.057)PNYIAPEILR 51.9 0.0028274 3493300.0 1742.5 1588.9 1620.6 2142.0 1793.3 1580.8 1625.9 1586.9 2003.9 2217.5 1594.0 True False 1919.3973172392973 1722.8021792450354 1730.5836614594698 2274.3064751650436 1667.3447945491464 1567.9264889125704 1687.774514226618 1555.2480346010336 1919.6830517499632 2077.486671559081 1397.94810519853 1.3730104215611878 1.2323792083829688 1.2379455682396026 1.6268890574032127 1.192708648016915 1.1215913402521485 1.2073227238910478 1.1125220090914354 1.3732148172104994 1.4860971332437596 1.0 10.449095090466747 -6.962771680624052 24.999456952140672 1.17352622215397 1.3562872820846619 0.15054104599460716 0.1590058217695584 196.88378878268156 132210.0885858523 0.02300677150389716 0.043478627665150725 1.0895027213889018e-07 6.962771680624052 0.18276105993069192 EGLRPGDTTST(ph)FCGTPNYIAPEILR ddPTM_A549_MK2206_60min_R1 2 EGLRPGDTTSTFCGTPNYIAPEILR 25 1 P41743 P41743 PRKCI Protein kinase C iota type 1 EGLRPGDT(0.098)T(0.098)S(0.098)T(0.704)FCGT(0.001)PNYIAPEILR;EGLRPGDT(0.029)T(0.029)S(0.157)T(0.784)FCGTPNYIAPEILR 136.0 2.5276000000000002e-24 370660000.0 2278.27 2952.43 2828.4 2660.85 4015.1000000000004 3065.43 3059.1499999999996 3093.15 3974.8 3401.82 3726.2000000000003 True False 2662.7862776463185 3102.696076151864 3229.5096503320583 3312.7583694500963 3424.4841087708073 3389.811767932251 3614.9579567210108 3531.61348487459 3074.514146451309 2633.3464993334014 2800.8817021117165 0.950695731147345 1.1077569159070857 1.1530332208951128 1.1827555469238318 1.2226450357360426 1.2102659549585804 1.2906499956765485 1.2608934830099894 1.097695109412614 0.9401848344212458 1.0 11.451665335771443 -9.341910853268194 1.5864440222419987 1.0283283516000716 1.174937084619725 0.3797664451391767 0.09131455511107793 0.29239147498470086 1.5161631482032312 0.020754385294831944 0.017830465169225884 4.550814641960441e-10 9.341910853268194 0.14660873301965327 EGLRPGDTTST(ph)FCGTPNYIAPEILR ddPTM_A549_PD325901_60min_R1 2 EGLRPGDTTSTFCGTPNYIAPEILR 25 1 P41743 P41743 PRKCI Protein kinase C iota type 1 EGLRPGDT(0.072)T(0.072)S(0.357)T(0.498)FCGTPNYIAPEILR;EGLRPGDT(0.007)T(0.029)S(0.308)T(0.656)FCGTPNYIAPEILR 179.54 4.8007999999999994e-49 539740000.0 6758.0 7495.0 7534.0 8230.4 7842.6 6916.3 7301.6 8344.0 6065.799999999999 7202.0 8144.7 True False 7444.067185023347 8126.6299537047835 8045.302545622384 8738.773115405402 7291.762831501216 6859.975945891954 7579.466383588828 8177.572374258631 5810.87552038771 6747.264490898987 7142.953533507194 1.0421553423389422 1.137712840435433 1.1263271569501778 1.2234117265935314 1.0208330205839875 0.9603836723439669 1.061110974337713 1.144844683070959 0.8135115947666772 0.9446042815829542 1.0 12.802305020971641 -8.042700727552432 0.8958770997430312 0.9195876908950478 1.1136883193545413 0.3019698617663339 0.09106214928033492 0.4284059949148549 0.6864773752757154 0.021447901225429517 0.032193502762940994 9.063569565810558e-09 8.042700727552432 0.1941006284594935 EGLSGDALSSPS(ph)APEPVVGTPDDKLDADYIKR ddPTM_A549_MK2206_60min_R1 2 EGLSGDALSSPSAPEPVVGTPDDKLDADYIKR 32 2 K7EJ08;Q92503-3;Q92503;Q92503-2 K7EJ08 SEC14L1 SEC14-like protein 1 1 EGLSGDALS(0.002)S(0.014)PS(0.883)APEPVVGT(0.1)PDDKLDADYIKR;EGLSGDALS(0.018)S(0.028)PS(0.896)APEPVVGT(0.057)PDDKLDADYIKR 126.99 1.2015999999999998e-23 26033000.0 2255.3900000000003 2217.5 2218.0 2090.26 3488.2 2245.0 2555.5 2221.87 3534.3 3952.4 4041.0 True False 2636.044693008612 2330.3612782916985 2532.545751816044 2602.373793835337 2975.0904007905983 2482.564409889609 3019.8012710722087 2536.8268766914994 2733.786693117354 3059.5500949389852 3037.5081740737105 0.8678313084087337 0.767195064093068 0.833757674607195 0.8567462685524895 0.9794509941353009 0.817302956113581 0.9941705826003574 0.8351670946416814 0.9000096580648786 1.0072565799339772 1.0 11.568672575744205 -14.999999998403156 0.04356088447540469 1.5973182684512683 0.5426694594406931 0.4645056683986266 0.05941030213906762 310.5055321544841 1.037248017536896 23.386569576851382 6.5876662905379 1.0000000036768681e-15 14.999999998403156 -1.0546488090105752 EGLSGDALSSPS(ph)APEPVVGTPDDKLDADYIKR ddPTM_A549_PD325901_60min_R1 2 EGLSGDALSSPSAPEPVVGTPDDKLDADYIKR 32 2 K7EJ08;Q92503-3;Q92503;Q92503-2 K7EJ08 SEC14L1 SEC14-like protein 1 1 EGLSGDALS(0.011)S(0.075)PS(0.914)APEPVVGTPDDKLDADYIKR;EGLSGDALS(0.289)S(0.289)PS(0.421)APEPVVGTPDDKLDADYIKR 119.96 7.057e-22 107726000.0 2622.4 2719.7 2914.3 3019.5 3499.8 2957.5 2713.2 3594.7 2809.7 3029.8999999999996 3575.6 True False 2888.6241174911547 2948.8986637879816 3112.081923109546 3206.0076572179464 3253.986121654546 2933.4151005559997 2816.4523107200075 3523.0008885124025 2691.618079994946 2838.5915969140324 3135.8238675958983 0.9211691215634948 0.9403904008322941 0.9924288016518753 1.022381291993882 1.0376814065610254 0.9354527627870003 0.8981538599230259 1.1234689948365424 0.8583447902826552 0.9052139778151057 1.0 11.61462881334924 EGLSGDALSSPSAPEPVVGT(ph)PDDKLDADYIKR ddPTM_A549_MK2206_60min_R1 2 EGLSGDALSSPSAPEPVVGTPDDKLDADYIKR 32 2 K7EJ08;Q92503-3;Q92503;Q92503-2 K7EJ08 SEC14L1 SEC14-like protein 1 1 EGLSGDALS(0.006)S(0.024)PS(0.114)APEPVVGT(0.856)PDDKLDADYIKR;EGLSGDALSSPS(0.006)APEPVVGT(0.992)PDDKLDADY(0.001)IKR 70.986 9.7383e-05 10718800.0 992.95 1118.5700000000002 1080.33 1097.4299999999998 1822.99 1241.1999999999998 1397.62 1446.77 1994.7199999999998 2324.7 1882.75 True False 1160.5356847032674 1175.5004352012384 1233.5370388004633 1366.3003992655047 1554.8305859002505 1372.5429601581202 1651.5494629136904 1651.8540780473018 1542.9191049132917 1799.5486554257307 1415.2112137434476 0.8200441555529192 0.8306183725691814 0.8716275187910442 0.9654392121805151 1.0986562082047728 0.9698502575651139 1.1669985701604868 1.1672138137443795 1.0902394567889533 1.2715760290406775 1.0 10.466801669366102 -6.3615165635057584 1.9228138253522715 1.0607601200741652 0.8263373614874575 0.6263861239428249 0.08670729734137486 0.15228817581280046 1.0820748056448588 0.00980757149456932 0.030105686841621404 4.3499417012324276e-07 6.3615165635057584 -0.2344227585867077 EGLYLSDT(ph)LPR ddPTM_A549_MK2206_60min_R1 4 EGLYLSDTLPR 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 EGLYLS(0.001)DT(0.999)LPR;EGLYLS(0.158)DT(0.842)LPR;EGLYLSDT(1)LPR;EGLYLSDT(1)LPR 166.11 1.4016e-30 29618000.0 1770.22 1642.21 1590.1 1085.59 2140.58 1629.95 1758.03 1802.69 2589.5 2252.7 2377.51 True False 2068.989858276265 1725.7914745539636 1815.600090154506 1351.5595987339877 1825.7035176091788 1802.430227126755 2077.441294691087 2058.2268280065887 2002.9823845817807 1743.813505431903 1787.1086510621083 1.1577303131774501 0.9656891725795727 1.015942757076054 0.7562828359264746 1.0215962619419547 1.0085733881124357 1.1624594248684483 1.151707718936591 1.120794968672652 0.9757736354728772 1.0 10.803411633413852 -7.420259507477097 3.1779290004051113 1.0743302929423912 0.9716781232434142 0.16306332039653282 0.10340623416935486 0.3584353484757086 6.9023015667438985 0.015939680428883808 0.026108120333446533 3.799622865508269e-08 7.420259507477097 -0.10265216969897706 EGLYLSDT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 EGLYLSDTLPR 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 EGLYLSDT(1)LPR;EGLYLS(0.004)DT(0.996)LPR 149.0 1.3579e-11 76185000.0 15600.1 14942.1 16081.6 16048.9 18136.9 15696.2 16695.6 17950.3 18774.2 17589.7 20066.6 True False 17183.81066781335 16201.323206304507 17172.994082516732 17040.20410330357 16863.02671290827 15568.375351258532 17330.960194182862 17592.267184762077 17985.185663039167 16479.083340123016 17598.535412657977 0.9764341330048222 0.9206063360620051 0.9758195031482467 0.9682739900643766 0.9582062550943483 0.8846403968401129 0.9847955973493875 0.9996438210482338 1.0219705925132319 0.9363894752440717 1.0 14.103167749274803 -7.992586939919197 24.998601924130348 1.0090200395647309 0.9476784933180915 0.20055951932408222 0.03367316856196077 98.90103101150201 333515.7533933311 0.00395453776207009 0.005458293831441207 1.0172157128806565e-08 7.992586939919197 -0.061341546246639345 EGMGS(ph)PAYEQDLIVASRPK ddPTM_A549_PD325901_60min_R1 1 EGMGSPAYEQDLIVASRPK 19 1 Q96M11 Q96M11 HYLS1 Hydrolethalus syndrome protein 1 1 EGMGS(0.992)PAY(0.008)EQDLIVASRPK 45.54600000000001 0.0075266000000000005 5573200.0 5154.7 4753.8 5354.0 5688.4 6420.4 5382.0 4816.3 6348.2 6514.2 6174.1 6742.1 True False 5678.001349310424 5154.419409462549 5717.354636217447 6039.759548706267 5969.4532531775685 5338.170776396411 4999.5869320804895 6221.580170933443 6240.43082774071 5784.2662723215035 5912.864441693227 0.9602793037623663 0.8717296769256752 0.9669348405660737 1.0214608517182076 1.009570456424693 0.9028062166883968 0.8455439798056307 1.052210858592221 1.0553989338462968 0.9782511216619576 1.0 12.529641486922984 -8.305627856714155 24.999983398412798 1.0288453416123453 0.9425952260325084 0.3412197374936067 0.054169374385326687 378.6571656766468 214227.47084883874 0.009237954051496649 0.011168174811156402 4.9473443918254275e-09 8.305627856714155 -0.08625011557983686 EGMNIVEAMER ddPTM_A549_MK2206_60min_R1 2 EGMNIVEAMER 11 0 P62937;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed 0 ; 122.42 2.3584e-05 4912700.0 2377.7 2473.2 1770.38 2065.71 3271.2 2252.56 2606.7 2084.83 3172.7 3068.3 3281.4 False True 2778.997630816213 2599.0753161086955 2021.4465050045499 2571.809042733246 2790.010813332436 2490.924404071688 3080.3036483286733 2380.361037024099 2454.088515760807 2375.168898973103 2466.5378179672034 1.126679514326897 1.053734225024258 0.8195481497504565 1.0426797529716376 1.1311445512851788 1.009886970281519 1.248836983520206 0.9650616421465912 0.9949527219425904 0.9629566113568037 1.0 11.26827169215483 EGMNIVEAMER ddPTM_A549_PD325901_60min_R1 2 EGMNIVEAMER 11 0 P62937;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed 0 ; 122.42 2.3584e-05 6948600.0 1693.79 1615.1 1672.67 1886.7600000000002 2160.96 1602.25 1778.04 1825.9 1923.1 1923.62 2317.06 False True 1865.7423138977042 1751.2101451939425 1786.1874447818168 2003.30088005714 2009.1816245072885 1589.2018072242952 1845.7042851808205 1789.4809921091598 1842.2787947603938 1802.1623049129578 2032.0763090535168 0.9181457928451091 0.8617836531983419 0.8789962447885493 0.9858393954655278 0.9887333539374356 0.7820581344036731 0.9082849285519681 0.8806170241424885 0.9065992190118465 0.8868575933314008 1.0 10.988738864245581 -10.429017971007637 0.7725557258612302 1.000354377766975 0.9005761949805126 0.0 0.06300671423574841 0.6421878322160514 0.6924924916994849 0.036637340048827245 0.010741681528053637 3.72376297088632e-11 10.429017971007637 -0.09977818278646244 EGMNPS(ph)YDEYADS(ph)DEDQHDAYLER ddPTM_A549_PD325901_60min_R1 4 EGMNPSYDEYADSDEDQHDAYLER 24 0 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 2 EGMNPS(0.994)Y(0.006)DEYADS(1)DEDQHDAYLER;EGMNPS(0.999)Y(0.001)DEYADS(1)DEDQHDAYLER;EGMNPS(0.937)Y(0.019)DEY(0.045)ADS(0.999)DEDQHDAYLER;EGMNPS(0.991)Y(0.008)DEY(0.002)ADS(0.999)DEDQHDAYLER 116.49 2.375e-16 42272700.0 1692.7999999999997 2163.59 1732.5400000000002 1827.1799999999998 2276.09 1942.56 2266.09 1913.54 1693.48 1776.9100000000003 2403.62 True False 1864.6518098265037 2345.9233224197646 1850.1205830093734 1940.0407587731388 2116.2252904842285 1926.7404354137154 2352.32729500203 1875.3729435569103 1622.3089248353351 1664.7155993506417 2107.9899778025647 0.8845638876187997 1.1128721422410315 0.8776704834896784 0.920327316164709 1.0039067133944577 0.9140178348581195 1.11591009434218 0.8896498386163383 0.7695999231108684 0.7897170370259511 1.0 11.041652292524828 -8.454818353489955 24.99969840158479 0.8879581207511902 0.9757914572653451 0.23071676272426545 0.09547518346024401 278.2307831879541 102198.41949882847 0.017487905054040957 0.021141842255897426 3.508986089042369e-09 8.454818353489955 0.08783333651415492 EGMNPSYDEYADS(ph)DEDQHDAYLER ddPTM_A549_MK2206_60min_R1 22 EGMNPSYDEYADSDEDQHDAYLER 24 0 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EGMNPSYDEY(0.001)ADS(0.999)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSY(0.001)DEY(0.011)ADS(0.988)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.002)Y(0.01)DEY(0.25)ADS(0.738)DEDQHDAYLER;EGMNPS(0.059)Y(0.055)DEY(0.185)ADS(0.7)DEDQHDAY(0.001)LER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.001)Y(0.003)DEY(0.012)ADS(0.985)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.003)Y(0.013)DEY(0.255)ADS(0.729)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEY(0.002)ADS(0.998)DEDQHDAYLER;EGMNPSYDEY(0.007)ADS(0.993)DEDQHDAYLER;EGMNPS(0.004)Y(0.018)DEY(0.464)ADS(0.513)DEDQHDAYLER;EGMNPS(0.001)Y(0.004)DEY(0.035)ADS(0.961)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER 352.8 6.016899999999997e-244 7667168820.0 61901.0 68116.73 64199.259999999995 58926.310000000005 93552.81 73661.76000000001 66872.59999999999 71305.90000000001 102505.38 101350.53 102463.33000000002 True False 72348.3754658511 71583.5806069225 73303.68042503775 73363.25859530254 79791.31557765811 81456.59855048124 79022.48580704485 81413.72969016015 79288.07509745564 78455.374882 77018.8573169542 0.9393592424789846 0.9294292735652514 0.9517627627656502 0.9525363157933148 1.0359971357312465 1.0576188921534435 1.026014778197048 1.0570622900197002 1.0294631452549727 1.0186515045157594 1.0 16.2329240984336 -6.700809740015086 5.5059291464283255 1.023090869265642 0.9416033505078923 0.8508309302638764 0.017661167378555085 0.07553140687734029 4.533395794922063 0.0031783405884632985 0.0066458094934223515 1.991545623737771e-07 6.700809740015086 -0.08148751875774962 EGMNPSYDEYADS(ph)DEDQHDAYLER ddPTM_A549_PD325901_60min_R1 24 EGMNPSYDEYADSDEDQHDAYLER 24 0 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EGMNPS(0.015)Y(0.013)DEY(0.202)ADS(0.769)DEDQHDAY(0.001)LER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.012)Y(0.008)DEY(0.106)ADS(0.875)DEDQHDAYLER;EGMNPSYDEY(0.001)ADS(0.999)DEDQHDAYLER;EGMNPS(0.059)Y(0.015)DEY(0.43)ADS(0.494)DEDQHDAY(0.003)LER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.022)Y(0.02)DEY(0.457)ADS(0.501)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEY(0.002)ADS(0.998)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.078)Y(0.011)DEY(0.051)ADS(0.859)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER 378.79 2.5572999999999985e-297 11019071500.0 82893.21 82564.04999999999 85747.87 87650.5 100467.11000000002 92956.68 88860.42000000003 91173.40999999997 100354.77000000002 97491.60999999999 109456.00000000003 True False 91308.46765644419 89522.01225205859 91567.23610203026 93064.47231627144 93410.64678631378 92199.67161776903 92242.05190938766 89354.88481339364 96137.20801001339 91335.97310657769 95993.60589875186 0.9511932258566339 0.9325830758611244 0.9538889100447976 0.9694861594680598 0.9730923837243657 0.9604772188161735 0.960918709592792 0.9308420490802238 1.0014959549640523 0.9514797600468644 1.0 16.550650691160502 -8.780942297403561 24.99897737880044 1.0007064314919736 0.9549297231015909 0.2234128330019649 0.019370635533066408 88.41593200305702 113331.71233443069 0.002249760995551582 0.002396808467017733 1.6559899721902835e-09 8.780942297403561 -0.045776708390382725 EGNNPAENGDAK ddPTM_A549_MK2206_60min_R1 1 EGNNPAENGDAK 12 0 P05204 P05204 HMGN2 Non-histone chromosomal protein HMG-17 0 102.62 0.00057591 3475100.0 1832.0 1506.4 1877.8 1616.6 2337.3 1513.8 1174.3 1246.6 1989.1 2781.7 2668.7 False True 2141.196811900282 1583.0693256453733 2144.100276266984 2012.6670725719325 1993.4862662025891 1673.9893112208858 1387.6551096145927 1423.309367552386 1538.572025939996 2153.3120380254472 2005.98813762695 1.0674025293256626 0.7891718280638077 1.0688499278980874 1.0033294987241967 0.9937677241505773 0.8344961168121298 0.6917563885777337 0.7095303012290676 0.766989593348294 1.0734420596189462 1.0 10.970097359287468 -7.260454509486357 24.32006974735377 0.8523843281093686 0.9793842133262154 0.2266110906986757 0.12691805488936972 84.94916602906505 2097685.629043437 0.019801284759044142 0.03307828458754415 5.4896605447240366e-08 7.260454509486357 0.1269998852168468 EGNNPAENGDAK ddPTM_A549_PD325901_60min_R1 1 EGNNPAENGDAK 12 0 P05204 P05204 HMGN2 Non-histone chromosomal protein HMG-17 0 77.279 0.0030074000000000004 6516100.0 3992.0 3637.9 4799.9 3606.3 4439.2 4096.7 4179.7 4759.1 4040.4 4582.5 5075.8 False True 4397.264901244923 3944.4786002111623 5125.650078143472 3829.0529604984536 4127.405906408614 4063.3378334565546 4338.760770719601 4664.176017058273 3870.596038869481 4293.160167945657 4451.508778147237 0.9878144962515629 0.8860992523646992 1.151441080674858 0.8601696978102208 0.9271925794396574 0.9128001394501927 0.9746719566226347 1.0477741928658064 0.8695020568914755 0.9644281033480325 1.0 12.12007868542126 EGNTTEDDFPSS(ph)PGNGNK ddPTM_A549_MK2206_60min_R1 4 EGNTTEDDFPSSPGNGNK 18 0 Q15007 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 EGNTTEDDFPS(0.017)S(0.983)PGNGNK;EGNTTEDDFPS(0.029)S(0.971)PGNGNK;EGNTTEDDFPS(0.226)S(0.774)PGNGNK;EGNTTEDDFPS(0.003)S(0.997)PGNGNK 276.18 9.816699999999998e-116 216342000.0 17665.1 19175.3 17062.5 16146.3 24999.800000000003 19095.2 19294.899999999998 18571.7 26388.5 27364.5 26751.5 True False 20646.53700977056 20151.240865671636 19482.21906688966 20102.144224834945 21322.362537034813 21115.841389632107 22800.53357276897 21204.295348445903 20411.546883775376 21182.840444529375 20108.36424616006 1.0267636271664051 1.0021322778415336 0.9688614562773313 0.9996906749226853 1.060372801885493 1.0501023917778114 1.1338830594896854 1.054501255739642 1.015077439114582 1.053434291582146 1.0 14.295508107143213 -4.899826327746293 11.825877390829106 1.0208535501444356 1.1168625725104266 0.0 0.044062326178407454 10170774.507054958 27572182.26734732 0.006406213941240509 24385241.918148782 1.259428950625709e-05 4.899826327746293 0.09600902236599107 EGNTTEDDFPSS(ph)PGNGNK ddPTM_A549_PD325901_60min_R1 3 EGNTTEDDFPSSPGNGNK 18 0 Q15007 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 EGNTTEDDFPS(0.013)S(0.987)PGNGNK;EGNTTEDDFPS(0.061)S(0.939)PGNGNK;EGNTTEDDFPS(0.017)S(0.983)PGNGNK 289.77 4.9515999999999995e-133 309235000.0 26705.9 27277.699999999997 27992.9 27535.0 32868.5 30522.5 30200.9 30807.8 30263.0 33339.7 30509.8 True False 29417.063308155528 29576.487510096482 29892.666528982343 29235.774413477793 30559.929950169284 30273.934879702603 31350.21177606661 30193.31426074845 28991.151352417368 31234.625652211187 26757.288017557155 1.0994037695020933 1.1053619294559849 1.1171784864507892 1.092628460488759 1.1421161191716056 1.1314276267399728 1.1716513181565988 1.12841459272467 1.0834861639712676 1.1673315184900714 1.0 14.707644278716666 -9.770979783238857 0.7938338105487982 1.0091462808128808 1.123293979358347 0.0 0.052394459194580606 0.19248756387207364 0.2540237259610434 0.010133474268970374 0.005490097196059235 1.6944166750849822e-10 9.770979783238857 0.11414769854546614 EGNVRVS(ph)R ddPTM_A549_PD325901_60min_R1 1 EGNVRVSR 8 1 Q9HAV0;P62879;C9JZN1;C9JIS1;B3KVK2;C9JXA5;E7EP32;P62879-2;H7C5J5;P62873-2;P62873;F6X3N5;F6UT28 Q9HAV0;P62873-2 GNB4;GNB2;GNB1 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 1 EGNVRVS(1)R 47.977 0.010158 18031000.0 1415.1 1395.0 1329.4 1531.4 1655.5 1426.6 1699.4 1573.6 1436.9 1438.5 1614.7 True False 1558.7599102584388 1512.5615457529266 1419.6210783316162 1625.991099938257 1539.2233911649537 1414.9822425877228 1764.071596947362 1542.213313534682 1376.5120899543506 1347.6728645040541 1416.1021364266408 1.1007397490351771 1.0681161385503515 1.0024849492239698 1.1482159782918238 1.0869437673817752 0.9992091715631869 1.2457234203450742 1.0890551421850596 0.9720429441818436 0.951677728489797 1.0 10.467709608276646 -8.755286707978126 24.443006818522015 0.9867980547208224 1.0924052959728625 0.39560373501685486 0.0644687293642934 85.20596883006638 338501.28136218525 0.010491071819137804 0.011744968959160409 1.7567634693646484e-09 8.755286707978126 0.10560724125204013 EGPDLDRPGS(ph)DR ddPTM_A549_MK2206_60min_R1 2 EGPDLDRPGSDR 12 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 EGPDLDRPGS(1)DR;EGPDLDRPGS(1)DR 60.918 0.0023542 46858000.0 5165.0 4159.2 2437.1000000000004 2736.3199999999997 3720.8 2858.7 3106.0 3651.0 3774.2999999999997 4631.9 6109.1 True False 6036.725727873884 4370.885514620443 2782.7174263980537 3406.7185228380736 3173.475248913955 3161.2057365485184 3670.3199952847885 4168.540430718568 2919.4270763186005 3585.5505730057416 4592.041867417394 1.3146059862187174 0.9518392124500965 0.6059869458383399 0.741874447402206 0.6910815146157947 0.6884096068415005 0.7992784258626565 0.907774918233268 0.6357579396288284 0.7808183541284408 1.0 12.164920080342956 -5.350018909396649 3.3314292463513824 0.7926033171689467 1.340261408932864 0.661747740469621 0.11405093872955356 0.16345665151712582 2.910268935229534 0.02053019163236941 0.19638110525839753 4.466641437497229e-06 5.350018909396649 0.5476580917639172 EGPDLDRPGS(ph)DR ddPTM_A549_PD325901_60min_R1 2 EGPDLDRPGSDR 12 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 EGPDLDRPGS(1)DR;EGPDLDRPGS(1)DR 79.771 0.00024401 54476000.0 4317.4 4387.1 3463.9 3476.8 4068.1 2645.5 3146.3999999999996 3328.0 3876.8 5220.9 4910.5 True False 4755.699269698104 4756.816313528791 3698.9810841228277 3691.554039614295 3782.3706901831124 2623.955925112731 3266.137973776143 3261.6204292345074 3713.871577935156 4891.251482995634 4306.539630224201 1.1042971104507218 1.1045564936043906 0.858921872717158 0.8571972759071327 0.878285355517836 0.6092956643652497 0.7584135417804355 0.7573645453866881 0.8623795197123985 1.1357730110429736 1.0 12.072313392153777 -2.6718303434331907 15.228836455020641 0.8989988852027105 1.2178777937166192 0.0 0.15941385658769444 0.0 0.0 0.020288857127240833 0.0 0.0021289705631003806 2.6718303434331907 0.31887890851390865 EGPDLDRPGS(ph)DRQER ddPTM_A549_MK2206_60min_R1 4 EGPDLDRPGSDRQER 15 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 EGPDLDRPGS(1)DRQER;EGPDLDRPGS(1)DRQER;EGPDLDRPGS(1)DRQER;EGPDLDRPGS(1)DRQER 136.2 2.3708e-10 449059000.0 4525.88 5884.25 4460.42 3668.76 6720.799999999999 5406.77 4928.6 4564.799999999999 7165.91 7609.55 7501.5599999999995 True False 5289.737896857667 6183.733191336161 5092.974626832877 4567.606364696895 5732.179222989923 5978.91081267654 5824.062823168259 5211.874379113694 5542.842826606847 5890.547369938003 5638.7156194764575 0.9381104233358744 1.0966563325125283 0.9032153721747275 0.8100437533895329 1.0165753355587994 1.0603320359028265 1.0328704648717522 0.9243016904614894 0.9829974059095195 1.0446611901461573 1.0 12.461150869195803 EGPDLDRPGS(ph)DRQER ddPTM_A549_PD325901_60min_R1 4 EGPDLDRPGSDRQER 15 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 EGPDLDRPGS(1)DRQER;EGPDLDRPGS(1)DRQER;EGPDLDRPGS(1)DRQER;EGPDLDRPGS(1)DRQER 135.27 2.8777999999999996e-10 451249000.0 4305.54 4452.01 3566.63 4532.860000000001 4683.12 4493.96 4447.12 4916.25 4736.74 4150.64 4364.2 True False 4742.635251228974 4827.196507030454 3808.6829596885036 4812.844467328018 4354.193807086934 4457.36267972769 4616.3575851574415 4818.191537026484 4537.671290257058 3888.567882047345 3827.4310669431743 1.2391170914063618 1.2612105672449785 0.9951016473120589 1.2574607832641795 1.1376282762329317 1.164583398568591 1.2061242918332564 1.2588578220625128 1.1855657779046889 1.015973328855534 1.0 11.902160679297722 -10.513324324586684 0.8134315917400355 0.9988853799412077 1.1876238511701591 0.47259149055909644 0.07343646453578043 0.4286596850697837 0.5064056285079678 0.04842078615382387 0.013554552095727987 3.066730944497681e-11 10.513324324586684 0.18873847122895138 EGPEPPEEVPPPT(ph)TPPVPK ddPTM_A549_MK2206_60min_R1 3 EGPEPPEEVPPPTTPPVPK 19 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 EGPEPPEEVPPPT(0.801)T(0.199)PPVPK;EGPEPPEEVPPPT(0.5)T(0.5)PPVPK;EGPEPPEEVPPPT(0.5)T(0.5)PPVPK 130.47 1.7836e-16 44134400.0 5652.32 5721.48 6051.900000000001 5732.049999999999 9715.4 6572.8 5371.12 7058.719999999999 8955.8 8340.93 7895.5 True False 6606.293430043783 6012.678893583044 6910.150421738291 7136.402507321499 8286.277529912559 7268.329333328473 6346.982979096597 8059.315176423374 6927.325599473842 6456.708119972526 5934.829445285564 1.113139558760464 1.0131173859358873 1.1643385012904608 1.2024612624698803 1.396211568724171 1.2246905155972423 1.069446567523256 1.357969129647935 1.1672324644437229 1.0879349068913051 1.0 12.53499085505559 -10.261084471858057 0.8768567104363846 1.0091579787666183 1.190762788170523 0.19565984961706406 0.10940400224582704 0.5440745859778093 0.8125614063341591 0.05512814991170195 0.02146486745394569 5.48170333425267e-11 10.261084471858057 0.18160480940390467 EGPEPPEEVPPPT(ph)TPPVPK ddPTM_A549_PD325901_60min_R1 1 EGPEPPEEVPPPTTPPVPK 19 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 EGPEPPEEVPPPT(0.5)T(0.5)PPVPK 58.158 0.004788399999999999 6407800.0 3396.1 3553.2 4209.0 3275.4 3905.4 3581.1 3422.9 3603.1 3493.9 3982.1 3784.8 True False 3740.869571923317 3852.640633956485 4494.648050773111 3477.7140190268815 3631.098176898585 3551.9367089099223 3553.160332582751 3531.2333439227286 3347.063533364539 3730.6695264105642 3319.293593823964 1.1270077401058338 1.160680887380644 1.3540977692169407 1.0477271505894152 1.0939370303533196 1.0700881402955211 1.070456780079331 1.0638508598616012 1.0083662197258614 1.1239347833984996 1.0 11.69666052710058 -7.134328021525407 0.6165993582344712 1.0038763497598875 1.2062620721304511 0.3073545080553347 0.07683389649509527 0.48582471604478555 0.3390661533797586 0.013577689350060946 0.04568127366242058 7.339593011453446e-08 7.134328021525407 0.20238572237056363 EGPEPPEEVPPPTT(ph)PPVPK ddPTM_A549_MK2206_60min_R1 1 EGPEPPEEVPPPTTPPVPK 19 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 EGPEPPEEVPPPT(0.056)T(0.944)PPVPK 121.45 3.3448e-14 19428000.0 2875.2 3268.6 2909.7 3205.3 4405.7 3227.5 2921.2 2737.8 3702.7 4240.4 4549.0 True False 3360.4634681090033 3434.95777868061 3322.3392128309956 3990.5986438913833 3757.627366195497 3569.03190775889 3451.9442273747354 3125.8915341608563 2864.044361996895 3282.490694914299 3419.35775398696 0.9827762140977246 1.0045622674829682 0.9716266772487199 1.1670608725391072 1.0989278211132238 1.0437725925570118 1.0095299982430268 0.9141750466198154 0.8375971653324162 0.9599728753409689 1.0 11.7395096588524 -8.11889993121119 3.3438279960480735 0.9205182383030595 1.046772515225798 0.4270984036169071 0.0629802840718408 0.21262487582343095 4.455846435617697 0.01281087962389863 0.01690295368372422 7.60501489150109e-09 8.11889993121119 0.1262542769227386 EGPEPPEEVPPPTT(ph)PPVPK ddPTM_A549_PD325901_60min_R1 2 EGPEPPEEVPPPTTPPVPK 19 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 EGPEPPEEVPPPT(0.134)T(0.866)PPVPK;EGPEPPEEVPPPT(0.184)T(0.816)PPVPK 118.47 5.0882e-14 43126000.0 7997.7 8311.8 7205.5 8065.200000000001 9152.2 8353.400000000001 7490.8 8990.599999999999 8668.099999999999 10135.6 10143.0 True False 8809.620616404438 9012.264556264634 7694.508560191411 8563.369086601822 8509.381045375947 8285.372679960941 7775.866493123043 8811.275430010743 8303.809901129722 9495.636486247686 8895.475301774584 0.9903484993822624 1.0131290628693839 0.8649912791794735 0.9626657144327624 0.9565965568673307 0.9314142751099616 0.8741372697164156 0.9905345280710246 0.9334869267157845 1.0674681412867701 1.0 13.118855978090808 -10.818973852059196 0.89222582088888 1.0025734516688332 0.9446119723748596 0.2766590305149339 0.0484568483447845 0.9201662286240773 1.2013806743119553 0.036893654237593956 0.007634803461950133 1.517141708563211e-11 10.818973852059196 -0.05796147929397355 EGPGEEHFEDMAS(ph)DEDMKPK ddPTM_A549_MK2206_60min_R1 2 EGPGEEHFEDMASDEDMKPK 20 1 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 EGPGEEHFEDMAS(1)DEDMKPK;EGPGEEHFEDMAS(1)DEDMKPK 134.34 1.7232e-17 57071000.0 4681.8 5979.0 5964.1 4628.2 7239.5 5453.7 5198.9 5463.6 7444.2 8168.1 7912.700000000001 True False 5471.973380979661 6283.305561626185 6809.8990614995855 5762.109207767791 6174.579140107663 6030.8069141269325 6143.472834348388 6238.082031573257 5758.100585944653 6322.9205370081745 5947.758210589714 0.9200060236539307 1.0564157686233857 1.1449522358482678 0.9687867266541901 1.0381355330003337 1.0139630261683057 1.032905611968256 1.0488123105721807 0.9681127547674376 1.0630762571603032 1.0 12.538130284528313 -8.762255864962173 24.99998002893325 0.9849421334642011 1.0309030211251287 0.0 0.05807020790867778 31.94336570145061 978077.5478133521 0.008814045139943789 0.009654487011303411 1.7287975365902489e-09 8.762255864962173 0.04596088766092754 EGPGEEHFEDMAS(ph)DEDMKPK ddPTM_A549_PD325901_60min_R1 3 EGPGEEHFEDMASDEDMKPK 20 1 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 EGPGEEHFEDMAS(1)DEDMKPK;EGPGEEHFEDMAS(1)DEDMKPK;EGPGEEHFEDMAS(1)DEDMKPK 158.77 2.4309000000000002e-27 107388000.0 12095.5 13256.4 11724.7 11961.1 13708.4 12735.599999999999 12461.7 12887.8 13812.0 13872.699999999999 15906.3 True False 13323.426255763517 14373.563351339853 12520.408648348666 12699.909981370962 12745.569275412658 12631.885496074729 12935.936812803904 12630.742718716483 13231.529672523824 12996.775354470199 13949.925938343402 0.9550893900549065 1.030368434561507 0.8975250982469019 0.9103926456314303 0.9136657306817383 0.905516312552897 0.9273122215830264 0.9054343925940889 0.9485017863897786 0.9316734305195608 1.0 13.767969842201165 -9.956137114439773 0.8638641452005145 0.9947961250029379 0.931399874038772 0.011547923369617186 0.0402575857948125 0.4798581980791287 0.7295151088564358 0.015145083263332824 0.007540996583127507 1.1062744584475155e-10 9.956137114439773 -0.0633962509641659 EGPGPGPGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 EGPGPGPGTPR 11 0 Q9UMN6;A0A669KBI7;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 EGPGPGPGT(1)PR;EGPGPGPGT(1)PR 57.802 0.013321000000000001 17241400.0 1692.57 1850.53 1843.58 1371.1399999999999 2593.7 2164.42 1730.54 1979.78 2680.2 2673.3999999999996 2729.4 True False 1978.2344366364957 1944.7140727473015 2105.0273657047005 1707.0693615528128 2212.1701658536144 2393.457487774284 2044.9567175274117 2260.4198778219684 2073.1389793999165 2069.4770832430618 2051.6146523921743 0.9642329441983086 0.9478944159809801 1.0260344764306724 0.8320614007910193 1.0782581238022613 1.1666213657538087 0.9967547829427912 1.101776045119549 1.010491408307425 1.0087065233376356 1.0 11.002544064686193 -6.804171961969659 24.999999821261053 1.0285428439596116 0.9488988635562295 0.34909585308045843 0.06693418648821886 154.26556087459406 90250.11640453202 0.009844861169481346 0.018605134835082988 1.5697411311680762e-07 6.804171961969659 -0.07964398040338205 EGPGPGPGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 EGPGPGPGTPR 11 0 Q9UMN6;A0A669KBI7;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 EGPGPGPGT(1)PR;EGPGPGPGT(1)PR 69.26100000000001 0.003879 23460000.0 2741.7 2946.6 2711.2 2920.5 3340.3 3851.5 3349.6000000000004 3022.3 3103.6000000000004 3080.1000000000004 3806.0 True False 3020.0353656671364 3194.9203230935987 2895.1983357700324 3100.8926520632617 3105.68885140942 3820.134660960754 3477.0708609714493 2962.0178555515186 2973.1664850597267 2885.6219603468476 3337.886128221834 0.9047748334290769 0.9571687590180327 0.8673748068548908 0.9289989331407108 0.9304358303750432 1.144477227267134 1.0416984664554036 0.8873933207330387 0.890733347648261 0.8645058128103617 1.0 11.704719022750297 -7.015597956888595 24.787763159114064 0.9651582375942549 0.9161831166166909 0.10696582440140912 0.0770486742957236 1405.7496301462418 2233974.5365912365 0.011932922338825112 0.021087812687739654 9.647216903587417e-08 7.015597956888595 -0.04897512097756396 EGPIGGES(ph)DSEEVR ddPTM_A549_MK2206_60min_R1 2 EGPIGGESDSEEVR 14 0 Q5TF21;E9PJP2;H3BRB8 Q5TF21 SOGA3 Protein SOGA3 1 EGPIGGES(1)DSEEVR;EGPIGGES(1)DSEEVR 141.46 6.3858e-13 3749800.0 655.95 1009.98 682.1 604.59 770.7 876.19 738.02 834.6 959.73 1116.8899999999999 1226.4 True False 766.6583235622219 1061.383668026629 778.8320366608317 752.7145771410763 657.3310509401168 968.9078442321503 872.108680914385 952.9071058553045 742.3526873738839 864.5837732862066 921.8510330819098 0.8316509892050005 1.1513613696111369 0.8448567162278481 0.8165251761172512 0.7130556102351415 1.051046003596613 0.9460407914267586 1.0336888191897653 0.8052848678729236 0.9378779675450938 1.0 9.848389826332161 EGPIGGES(ph)DSEEVR ddPTM_A549_PD325901_60min_R1 3 EGPIGGESDSEEVR 14 0 Q5TF21;E9PJP2;H3BRB8 Q5TF21 SOGA3 Protein SOGA3 1 EGPIGGES(0.975)DS(0.025)EEVR;EGPIGGES(0.999)DS(0.001)EEVR;EGPIGGES(0.988)DS(0.012)EEVR 151.54 1.2525e-13 8457700.0 1664.0500000000002 1760.4899999999998 1911.45 1969.54 1722.8 1894.04 1942.99 1806.54 2133.4 2330.96 2476.5299999999997 True False 1832.9831309911362 1908.8526707401916 2041.1724914826007 2091.194012650121 1601.7964713373494 1878.6155662069596 2016.9315476949255 1770.5071424967857 2043.7406170983456 2183.7827877958784 2171.932510017136 0.8439411089144176 0.8788729216660288 0.9397955424805057 0.9628264243964109 0.7374982712168675 0.8649511702332491 0.9286345401584383 0.8151759478395657 0.9409779574975012 1.0054560985316479 1.0 11.08476355862556 -9.204562219005625 1.4580210719536895 0.9827650999170343 0.8742903645368416 0.3906198149330039 0.06116874823213756 0.276746371037306 1.2165067873586444 0.013445834155619283 0.012086576570071438 6.243638946573102e-10 9.204562219005625 -0.1084747353801927 EGPLPAARPAGAT(ph)LER ddPTM_A549_PD325901_60min_R1 1 EGPLPAARPAGATLER 16 1 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 1 EGPLPAARPAGAT(1)LER 81.96700000000001 8.776899999999999e-05 16704000.0 2549.4 2737.9 2470.1 2435.7 2590.9 2919.5 2617.1 2617.8 3286.2 3025.5 3208.4 True False 2808.213211230913 2968.6324416608845 2637.7358399179543 2586.147657123947 2408.9241221197694 2895.7245599571393 2716.69517263207 2565.5859253756275 3148.0924420683305 2834.4694136649414 2813.7871397233152 0.9980190653323726 1.055030922471554 0.9374326162345484 0.9190985418243994 0.856114553980314 1.0291199782233282 0.9654942032677025 0.9117910481415826 1.1188097342636543 1.0073503335236864 1.0 11.458297478879423 -8.755935787402267 24.999987465949097 1.0561045970438279 0.959286454321886 0.26525691376072436 0.060326422902418055 122.99243616897253 558690.3931465219 0.01150333490633813 0.0128641151597252 1.7541398409631267e-09 8.755935787402267 -0.09681814272194189 EGPPAPPPVKPPPS(ph)PVNIR ddPTM_A549_MK2206_60min_R1 4 EGPPAPPPVKPPPSPVNIR 19 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR 134.63 2.7587e-17 240493000.0 21786.4 22795.7 21279.8 20226.9 28342.9 19196.0 21348.800000000003 21810.5 30412.9 28971.1 29573.1 True False 25463.411693659564 23955.903761692934 24297.595621954486 25182.491408020047 24173.69695561259 21227.307978726465 25227.600616656768 24902.20516685491 23524.426709421605 22426.508388697206 22229.2830939617 1.1454895592461267 1.0776732502093263 1.0930444998720905 1.1328521617892637 1.0874708308599959 0.9549254417697614 1.1348814313993563 1.1202432872708914 1.0582629502708394 1.0088723191792486 1.0 14.440173800992893 -14.999999863485229 0.10465915579548056 0.6964014950703841 1.1456588787334465 0.33150000013072123 0.0487595017193593 83.7135464634801 0.6257463460361324 5.419559646496224 0.29316789518663733 1.0000003143369261e-15 14.999999863485229 0.44925738366306245 EGPPAPPPVKPPPS(ph)PVNIR ddPTM_A549_PD325901_60min_R1 2 EGPPAPPPVKPPPSPVNIR 19 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR 130.43 4.7104e-17 343060000.0 20295.1 19059.7 20033.7 20011.9 21950.0 23819.9 21838.7 21153.8 20574.0 23247.0 24006.0 True False 22355.443611537037 20665.927809022956 21393.30735442465 21247.989612677557 20408.307723389145 23625.918631862667 22669.783679095177 20731.870864164925 19709.34632801224 21779.18045264215 21053.41418657208 1.061844098701834 0.9815950812483296 1.0161443253260725 1.009241989179578 0.9693585820586579 1.1221894188986856 1.0767746968828467 0.9847272599323943 0.9361591499293692 1.0344726161580464 1.0 14.361766590543033 -8.50184798197802 22.81428610917624 0.9693576825853077 1.0311241552342354 0.1347934365405915 0.047264206697695016 249.58564088082804 270752.0241439403 0.0077382659593546645 0.009294440279967285 3.1488503272522656e-09 8.50184798197802 0.06176647264892765 EGPS(ph)GSGDSQLSASSR ddPTM_A549_MK2206_60min_R1 2 EGPSGSGDSQLSASSR 16 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 EGPS(0.987)GS(0.012)GDSQLSASSR;EGPS(0.496)GS(0.496)GDS(0.006)QLS(0.001)AS(0.001)S(0.001)R 46.318999999999996 0.029767000000000002 4183600.0 1184.01 962.32 976.4 843.41 1390.24 1111.08 865.22 905.73 1250.5700000000002 1640.63 1598.9 True False 1383.8419417347452 1011.2979775989481 1114.8682020167657 1050.0454878621133 1185.7375376397913 1228.6537481247872 1022.4192744109163 1034.120001181793 967.3178917499272 1270.0105435329792 1201.8490026049121 1.1514274578049137 0.8414517758945094 0.9276275136064327 0.8736916913740604 0.9865944349662891 1.022302922797937 0.8507052651330607 0.8604408698101177 0.804858089205335 1.0567138973201562 1.0 10.231039935389095 -7.773305959069545 24.999792465970426 0.8973028430429434 0.9563024081414148 0.04558927632596588 0.10100390896313459 491.43869787990997 1035331.3684620501 0.015824160435295755 0.021958345179885957 1.6853652726249343e-08 7.773305959069545 0.058999565098471374 EGPS(ph)GSGDSQLSASSR ddPTM_A549_PD325901_60min_R1 2 EGPSGSGDSQLSASSR 16 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 EGPS(0.962)GS(0.037)GDSQLSASSR;EGPS(0.889)GS(0.094)GDS(0.012)QLS(0.002)AS(0.002)S(0.002)R 53.828 0.015045 4297000.0 1197.28 1200.5500000000002 1078.7 1154.4 1410.1 1168.72 1040.6 1600.77 1117.73 1103.67 1582.28 True False 1318.8269842090485 1301.7245618305915 1151.9070687500498 1225.7046661673787 1311.0594405809118 1159.202331807881 1080.2006024381697 1568.8413865702282 1070.7556951107779 1033.984087846499 1387.6695908993279 0.95038977063289 0.9380652068529968 0.8301018313758076 0.8832827887890934 0.9447922251659588 0.8353590360487897 0.7784278112905161 1.1305583093115743 0.7716215027936421 0.7451226823932846 1.0 10.43844838260992 -11.209838878289105 1.6542598866854576 1.0000863712792005 0.8780632858122086 0.0 0.12232498237522607 0.5458530044723907 2.6868003161239735 0.0713377008731106 0.014785148523882697 6.168237988568659e-12 11.209838878289105 -0.12202308546699192 EGPSGSGDS(ph)QLSASSR ddPTM_A549_MK2206_60min_R1 2 EGPSGSGDSQLSASSR 16 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 EGPS(0.001)GS(0.111)GDS(0.84)QLS(0.042)AS(0.003)S(0.004)R;EGPS(0.016)GS(0.082)GDS(0.9)QLS(0.002)ASSR 84.94 9.3499e-05 9123600.0 2329.3 2286.0 1810.79 1843.6299999999999 2933.3 1748.26 1719.3600000000001 2317.6000000000004 3141.5 2927.1 3488.6000000000004 True False 2722.4288940826027 2402.347635704543 2067.587250645166 2295.3194327636947 2501.8154557190146 1933.2597127989347 2031.7454562436744 2646.1268973523293 2429.9552659446476 2265.86607704076 2622.284339538119 1.0381898152822446 0.9161278201156801 0.7884679855157676 0.8753129468667707 0.9540595647837627 0.7372425955682033 0.7747998283822797 1.0090922854759563 0.9266559042840686 0.8640810010099296 1.0 11.356608413013722 -8.280433942092747 24.75741315715228 0.9676770785872688 0.8663004775326587 0.15091851471137885 0.08845783695943352 784.4434999279327 1022436.8667142214 0.013959857532277213 0.01689107965130499 5.2428334051229165e-09 8.280433942092747 -0.1013766010546101 EGPSGSGDS(ph)QLSASSR ddPTM_A549_PD325901_60min_R1 2 EGPSGSGDSQLSASSR 16 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 EGPS(0.001)GS(0.028)GDS(0.966)QLS(0.003)ASS(0.001)R;EGPSGS(0.001)GDS(0.999)QLSASSR 127.88 5.7641e-10 9057000.0 3415.7000000000003 3112.2 2800.9 3512.1000000000004 2610.2 3541.3 2837.1000000000004 3645.3999999999996 3957.3999999999996 3685.5 3353.0 True False 3762.4593494945616 3374.4760162668504 2990.985917179952 3729.034440442177 2426.868556701153 3512.4608269142714 2945.0673930206917 3572.689637239023 3791.084240229206 3452.7969010286342 2940.6022564182354 1.2794859764806747 1.147545884147246 1.0171337897370336 1.2681192882522923 0.8252964342267664 1.194469880871472 1.0015184428947201 1.2149516751002885 1.2892203397976338 1.17418018485583 1.0 11.521895944270058 -11.209833697876087 1.6675890719423505 1.0001783692081525 1.154109383858661 0.0 0.14473778982338537 0.6040290903722297 3.030612835534621 0.09982368027576403 0.020868518722146574 6.1683115658584556e-12 11.209833697876087 0.1539310146505084 EGPSGSGDSQLS(ph)ASSR ddPTM_A549_MK2206_60min_R1 1 EGPSGSGDSQLSASSR 16 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 EGPS(0.001)GS(0.001)GDS(0.007)QLS(0.664)AS(0.142)S(0.185)R 46.926 0.0272 1985400.0 314.3 435.81 557.9 554.36 511.33 415.22 258.58 449.3 843.32 812.79 469.02 True False 367.3461561027612 457.99086750498583 637.0186090794283 690.1782248861657 436.11403435475506 459.1583047992709 305.5606388862654 512.9896509235422 652.3093665053125 629.1801744928293 352.54938970652097 1.041970761624514 1.2990828544228636 1.8068918219081678 1.957678115570426 1.237029610851964 1.3023942693008101 0.8667172538310979 1.4550859139213923 1.8502637801992114 1.784658243250936 1.0 8.46168157294097 EGPSGSGDSQLS(ph)ASSR ddPTM_A549_PD325901_60min_R1 1 EGPSGSGDSQLSASSR 16 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 EGPSGSGDS(0.007)QLS(0.979)AS(0.007)S(0.007)R 73.983 0.00056566 1883600.0 461.57 638.59 626.0 478.02 708.98 463.26 702.99 681.08 791.3 680.3 747.84 True False 508.42824661012537 692.4062204317996 668.4841244438034 507.546209737812 659.1836906482199 459.48736415336367 729.7426691408881 667.4953251030765 758.0444128198744 637.3457418992757 655.8604209483494 0.7752080021461842 1.0557219163043965 1.0192475458073846 0.7738631475946045 1.0050670380369426 0.7005871210965319 1.1126493470755678 1.017739908954871 1.1558014306211233 0.9717703973929358 1.0 9.357245005484376 -7.823303266937137 24.99999978832083 1.0730304629069096 0.9019489878960446 0.3187931301382987 0.11604057411356321 56.3075268709426 22754.201818226484 0.017434944590541263 0.024089843667256892 1.5020926915643852e-08 7.823303266937137 -0.17108147501086501 EGPVGGES(ph)DSEEMFEK ddPTM_A549_MK2206_60min_R1 4 EGPVGGESDSEEMFEK 16 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 EGPVGGES(0.996)DS(0.004)EEMFEK;EGPVGGES(0.987)DS(0.013)EEMFEK;EGPVGGES(0.997)DS(0.003)EEMFEK;EGPVGGES(0.678)DS(0.322)EEMFEK 185.26 4.1992e-34 24853500.0 7248.7 8572.6 8070.4 6966.700000000001 10371.8 7472.099999999999 8303.9 7696.800000000001 11760.600000000002 10314.900000000001 11865.4 True False 8472.103346299988 9008.908723464903 9214.904073695317 8673.541812747048 8846.121959440374 8262.79266242144 9812.61114257738 8787.844970461421 9096.842877819068 7984.756925990824 8918.893711619441 0.949905181094671 1.0100926207617198 1.0331891343979396 0.9724907699535928 0.9918407198771456 0.9264369471806532 1.1002049648594436 0.9853066147668863 1.0199519325998692 0.8952631552933933 1.0 13.12264905582319 EGPVGGES(ph)DSEEMFEK ddPTM_A549_PD325901_60min_R1 4 EGPVGGESDSEEMFEK 16 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 EGPVGGES(0.968)DS(0.032)EEMFEK;EGPVGGES(0.798)DS(0.202)EEMFEK;EGPVGGES(0.999)DS(0.001)EEMFEK;EGPVGGES(1)DSEEMFEK 131.56 1.4526e-10 45514000.0 13231.800000000001 13607.599999999999 13288.300000000001 12980.1 14874.400000000001 15858.699999999999 12916.7 14374.400000000001 13930.0 13068.899999999998 14533.100000000002 True False 14575.082595263682 14754.360207876356 14190.12394703928 13781.851297054038 13829.673457894283 15729.552005135223 13408.252086789445 14087.691315501355 13344.57054287988 12243.727423647577 12745.620832911382 1.14353649667879 1.1576023170074277 1.113333287806424 1.0813009015195973 1.085052947925745 1.234114227258261 1.0519889350675673 1.1052965956059604 1.0469925881069604 0.9606222862076809 1.0 13.63771402758577 -8.850292053468385 0.8008835976178855 1.0103778928342373 1.129728425198319 0.5718247884914361 0.047188974435396436 0.29220904668341213 0.38907871701512364 0.011313077480249128 0.011064930967166093 1.4115879635745151e-09 8.850292053468385 0.11935053236408177 EGPVLATS(ph)SGAGVFK ddPTM_A549_PD325901_60min_R1 1 EGPVLATSSGAGVFK 15 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EGPVLAT(0.109)S(0.782)S(0.109)GAGVFK 105.14 5.2946e-06 2073200.0 2877.8 2983.9 2510.6 3330.3 2688.4 3583.5 2568.5 3607.2 2820.4 3024.5 3250.3 True False 3169.95213747561 3235.363724997961 2680.9844134642367 3536.005067339933 2499.5760584765094 3554.31716410564 2666.245673037131 3535.2515662063433 2701.868396205199 2833.5325538356024 2850.5337053492976 1.1120556587444987 1.1350027957664537 0.9405201588857253 1.240471235510839 0.8768800220765035 1.2468953296134075 0.9353496392741006 1.2402068986492276 0.9478465001606141 0.9940358005654201 1.0 11.477016344983367 EGPYSISVLYGDEEVPR ddPTM_A549_MK2206_60min_R1 1 EGPYSISVLYGDEEVPR 17 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 56.205 0.027137 2200000.0 865.58 1379.1 976.8 1106.6 1601.4 1209.9 1073.5 1232.7 1854.4 1594.9 1708.8 False True 1011.6687426007892 1449.2902993876353 1115.32492803152 1377.717049677161 1365.8361813617519 1337.93081493338 1268.541054390927 1407.4389999854222 1434.381360868297 1234.6109822938433 1284.4577995192158 0.7876231846460553 1.1283284666340285 0.8683235279890053 1.0726059277251871 1.063356212927351 1.0416308075159648 0.9876081992462138 1.0957456138397381 1.1167212822446941 0.9611923278102009 1.0 10.326943776360936 -5.250041161330379 24.75994365694468 1.0469226502446791 0.7876230100342702 0.47073941155212784 0.07373627166010033 897.9587086460233 1950562.91717041 0.009548613239901882 0.20344399945857347 5.6228803043027886e-06 5.250041161330379 -0.25929964021040897 EGPYSISVLYGDEEVPRS(ph)PFK ddPTM_A549_MK2206_60min_R1 2 EGPYSISVLYGDEEVPRSPFK 21 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 EGPYSISVLYGDEEVPRS(1)PFK;EGPYSISVLYGDEEVPRS(1)PFK 96.303 2.996e-07 47562000.0 2245.6000000000004 2238.6 1944.3200000000002 2066.41 3677.3999999999996 2791.3999999999996 2520.4 2360.1000000000004 4064.2000000000003 2807.6 3175.7 True False 2624.6023803511316 2352.535178166314 2220.053812520727 2572.680542764671 3136.4593314223216 3086.7840952186443 2978.3240554139666 2694.65140250312 3143.66518919377 2173.361210037115 2387.0860451387966 1.0995005335882329 0.985525923104932 0.9300267231848539 1.0777493957554776 1.3139280579389223 1.2931180681587722 1.2476819013203155 1.1288455261135928 1.3169467416542089 0.9104662207141953 1.0 11.221034855546662 -6.528529353760509 24.24624597975265 1.17994602816317 1.0032051125408663 0.2558394580099991 0.12673095283045774 104.30810494867917 447576.58563300595 0.019021369287841292 0.0397009106147072 2.961219811170951e-07 6.528529353760509 -0.17674091562230365 EGPYSISVLYGDEEVPRS(ph)PFK ddPTM_A549_PD325901_60min_R1 2 EGPYSISVLYGDEEVPRSPFK 21 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 EGPYSISVLYGDEEVPRS(1)PFK;EGPYSISVLYGDEEVPRS(1)PFK 205.38 1.2400999999999998e-56 75719000.0 3890.4 4095.7 3442.1000000000004 3696.7 4085.3 3606.4 3892.7 4966.4 4026.0 4274.700000000001 4185.8 True False 4285.350544038889 4440.859012860398 3675.701605028779 3925.036763185158 3798.3626215198938 3577.030674098107 4040.8388286671757 4867.34125593457 3856.8012207921306 4004.794712475133 3670.9731359723987 1.1673609109383332 1.2097225581260118 1.001288069642909 1.0692087949985667 1.034701829958707 0.9744093845433691 1.1007541267655732 1.325899448361195 1.0506209329070746 1.0909354452179365 1.0 11.841946841556314 -8.987359775445483 23.52740134566423 1.0223324563581935 1.1067699326859182 0.06855324798203999 0.09666245949325983 52.33557582951919 97416.8959949902 0.01760406268280068 0.017703852570599882 1.0295328880527198e-09 8.987359775445483 0.08443747632772469 EGQEDQGLTK ddPTM_A549_MK2206_60min_R1 2 EGQEDQGLTK 10 0 A6NLN1;P26599;P26599-2;P26599-3;A0A087WUW5;A0A0D9SF20;O95758-7;O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;A0A0U1RRM4 A6NLN1;O95758-1;A0A0U1RRM4 PTBP1;PTBP3 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 0 ; 103.34 2.806e-05 3895500.0 2556.0 3257.7 2273.2 2353.0 3358.4 2563.2 2300.6 2381.0 3775.1 3490.6 3710.3 False True 2987.3903117997406 3423.503015238274 2595.5739418522244 2929.4851056301854 2864.38380884558 2834.4361226855417 2718.589240551251 2718.514041506685 2920.0458775959373 2702.0710356730146 2788.9301109293956 1.0711599763983362 1.227532738028136 0.9306701274730989 1.0503974603558461 1.0270547109160222 1.0163166554722238 0.9747785467615379 0.9747515833592384 1.0470129266247006 0.968855771998017 1.0 11.445496066328808 -5.760244971989305 24.999987331713196 1.0135239822407887 1.1493463470630016 0.5658482761434933 0.049493549897830114 15.245353271869897 319056.5633607045 0.006026398609330124 0.021026122833626155 1.7368208658422851e-06 5.760244971989305 0.135822364822213 EGQEDQGLTK ddPTM_A549_PD325901_60min_R1 1 EGQEDQGLTK 10 0 A6NLN1;P26599;P26599-2;P26599-3;A0A087WUW5;A0A0D9SF20;O95758-7;O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;A0A0U1RRM4 A6NLN1;O95758-1;A0A0U1RRM4 PTBP1;PTBP3 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 0 98.898 0.001343 5930500.0 6627.6 5908.1 5081.8 5536.6 7019.1 6072.4 5911.1 7115.8 5762.6 7119.4 7077.2 False True 7300.42907301875 6405.996321478752 5426.681507345879 5878.5832074690825 6526.102630580441 6022.948387697805 6136.050145178035 6973.86978676289 5520.417961981305 6669.879868995595 6206.74926606715 1.1762081502036574 1.0321016762350792 0.8743194343315961 0.9471275470410606 1.0514525963307757 0.9703869335637254 0.9886093157853768 1.123594572265011 0.8894217770583904 1.074617256646796 1.0 12.599622151234 -8.803062542760257 24.999925480556293 0.947782544439236 1.0118471082367368 0.0 0.08998085174393196 252.33972482449704 151560.52022387303 0.01498791344434966 0.015955924027653157 1.5737562114712578e-09 8.803062542760257 0.0640645637975008 EGQEEVLKEVVES(ph)EGER ddPTM_A549_MK2206_60min_R1 2 EGQEEVLKEVVESEGER 17 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 EGQEEVLKEVVES(1)EGER;EGQEEVLKEVVES(1)EGER 45.784 0.0095536 5324300.0 1747.75 1862.42 1548.8600000000001 1737.9499999999998 2158.56 1642.21 1910.4499999999998 1585.21 2554.5 2752.2 3108.8 True False 2042.7274716150214 1957.209222961005 1768.5116380332731 2163.747828019539 1841.0386834271403 1815.9875721892274 2257.5540357346504 1809.9183720020205 1975.9098286982653 2130.476108514087 2336.799161484868 0.8741561984800674 0.837559879008746 0.756809428547343 0.925945140550561 0.7878463471620267 0.7771260800330388 0.9660881743470573 0.774528852043899 0.8455625375364807 0.9117069809115828 1.0 11.190318030258728 -10.574919095444194 0.6121543401031235 1.0170867623328734 0.8345224601475664 0.2764050497067777 0.06728190039180777 0.6443461700750823 0.3753962626241675 0.06309019882576163 0.012608363397016431 2.6612207714417096e-11 10.574919095444194 -0.18256430218530706 EGQEEVLKEVVES(ph)EGERK ddPTM_A549_MK2206_60min_R1 1 EGQEEVLKEVVESEGERK 18 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 EGQEEVLKEVVES(1)EGERK 45.784 0.006626000000000001 2590600.0 551.15 479.17 645.47 560.9 646.13 673.63 676.65 711.77 674.94 632.19 822.58 True False 644.1706456762233 503.5577062994516 737.0073518596498 698.3205251797574 551.0851329232354 744.9130794805958 799.5885463005321 812.6655772042059 522.0671676577045 489.3778399249767 618.3106839469316 1.041823572518943 0.8144088714188723 1.191969297950714 1.1294007095625294 0.8912754497551816 1.2047553096212231 1.2931824842430821 1.3143320959887463 0.8443444068039305 0.7914756329311285 1.0 9.272188124281486 -8.792023748248338 24.99976106224233 0.9264959696368525 1.1056147005885557 0.29571664281222576 0.15426961230839872 231.71677352253502 189404.97395108914 0.027758053175731233 0.029552345511162224 1.6142702823000535e-09 8.792023748248338 0.17911873095170316 EGQGGAGRT(ph)SPGGR ddPTM_A549_MK2206_60min_R1 1 EGQGGAGRTSPGGR 14 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 EGQGGAGRT(0.5)S(0.5)PGGR 69.52199999999999 0.0011005000000000001 14980000.0 974.25 946.31 824.37 759.3 1326.8 831.13 829.71 517.21 1440.2 1698.7 1530.6 True False 1138.679581874372 994.473136983187 941.2780619587884 945.3285340862717 1131.629477601332 919.079624940557 980.4575670598011 590.5261013891948 1113.9969995268114 1314.9624902016135 1150.5097775890167 0.9897174313985962 0.8643760847188829 0.8181399935003684 0.8216605825526156 0.9835896223087734 0.7988455577201267 0.8521940327308011 0.5132734313885523 0.968263826372062 1.1429389961006853 1.0 10.16805752899701 -8.96427801610261 24.99998305852724 0.9859991422274835 0.8295541846123492 0.32644736855612566 0.12688562433463843 161.29301778492692 112881.40239882984 0.01994397580804905 0.0211579092640159 1.0857303645858778e-09 8.96427801610261 -0.15644495761513433 EGQGGAGRT(ph)SPGGR ddPTM_A549_PD325901_60min_R1 1 EGQGGAGRTSPGGR 14 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 EGQGGAGRT(0.561)S(0.439)PGGR 43.45399999999999 0.02756 16511000.0 183.43 335.66 356.15 281.38 293.76 292.85 425.93 538.56 302.67 516.18 407.94 True False 202.05167856597106 363.94724619887245 380.3204807039308 298.76020353965447 273.12731101698387 290.4651266941079 442.13899922783924 527.8179983078531 289.94983246327735 483.5883067081698 357.76596614472294 0.5647593613872076 1.0172774401119224 1.0630426499263044 0.8350716161156605 0.7634245201135169 0.8118858532692553 1.2358330335115941 1.4753164030542274 0.8104455423409036 1.3516889600184872 1.0 8.48287234181074 EGQGGAGRTS(ph)PGGR ddPTM_A549_PD325901_60min_R1 1 EGQGGAGRTSPGGR 14 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 EGQGGAGRT(0.396)S(0.604)PGGR 55.093999999999994 0.004647 12183000.0 1184.3 1134.9 831.72 1144.7 1225.2 1396.5 1105.7 1602.1 1356.1 1499.8 1576.9 True False 1304.5292641644194 1230.5420059318965 888.165520738658 1215.4055191976772 1139.1461787105416 1385.1273670081 1147.778018562256 1570.1448586768634 1299.1078329647821 1405.1023720425314 1382.9512967926987 0.9432937133721531 0.8897941733636857 0.6422247282304635 0.8788491120521823 0.8237066492163657 1.0015734973606432 0.8299482571975962 1.1353580291065193 0.9393735238382118 1.0160172489813668 1.0 10.433534634850515 -7.2837353234541595 1.7327383006837798 0.977231149440833 0.8256385469648718 0.35141623610706174 0.09913571674003714 0.31293155856487503 1.831920213423876 0.014721313205713071 0.027564675788748855 5.203129996208911e-08 7.2837353234541595 -0.15159260247596118 EGQGGAGRTS(ph)PGGRT(ph)SPEAR ddPTM_A549_MK2206_60min_R1 1 EGQGGAGRTSPGGRTSPEAR 20 2 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 EGQGGAGRT(0.457)S(0.493)PGGRT(0.58)S(0.47)PEAR 46.66 0.009188799999999999 15669000.0 566.73 604.65 576.56 481.81 498.33 321.74 590.79 305.54 752.1 838.11 963.01 True False 662.3801687817939 635.424102331038 658.3248776677451 599.8534716292726 425.0263171337594 355.78631324627304 698.1288956903734 348.8512306770065 581.7505508569056 648.7803689073255 723.8680392761001 0.9150565197549034 0.877817596376392 0.9094542678332627 0.8286779344881042 0.5871599436256426 0.49150714486866276 0.9644422157228173 0.48192655532336126 0.8036693420511862 0.8962688414260345 1.0 9.499582908583335 -10.105175896832401 0.9885055030918862 0.9795006357939928 0.7602966939644729 0.15193201176743398 0.16424030703451983 0.545243781875302 1.0668469156178664 0.06427688194324795 0.0312282040984944 7.84917664891943e-11 10.105175896832401 -0.21920394182951997 EGQGGAGRTS(ph)PGGRTS(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 EGQGGAGRTSPGGRTSPEAR 20 2 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 EGQGGAGRT(0.483)S(0.523)PGGRT(0.498)S(0.496)PEAR 45.941 0.0080477 22789000.0 484.02 307.84 503.15 721.39 626.89 766.24 700.87 565.98 638.9 669.1 652.63 True False 533.1573540833089 333.7827571645738 537.2967846867404 765.9486219044398 582.8594090530942 759.9999954860625 727.5419913807799 554.6910848972794 612.0492548345982 626.85291181068 572.3606473624321 0.9315059596431359 0.5831685995581991 0.9387381665086969 1.3382272618393753 1.0183429132296966 1.3278341182055668 1.2711251109478938 0.9691286210074399 1.0693419571297575 1.0952061688716033 1.0 9.16078067279884 -5.996138906281614 24.236521179631158 1.0842331987456306 0.7582411357412074 0.4753263605321958 0.14908266515523913 53.931357370920715 338514.67768411903 0.0205030162943794 0.063308113667966 1.0089301346852635e-06 5.996138906281614 -0.3259920630044232 EGQPS(ph)PADEKGNDS(ph)DGEGESDDPEK ddPTM_A549_PD325901_60min_R1 1 EGQPSPADEKGNDSDGEGESDDPEK 25 1 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 2 EGQPS(0.999)PADEKGNDS(0.992)DGEGES(0.009)DDPEK 47.479 0.0031604 2756900.0 634.9 555.44 709.25 749.43 910.84 475.65 647.14 938.02 661.86 622.02 881.15 True False 699.3545806113233 602.2488781168498 757.3839700667214 795.7205890209788 846.8657406274156 471.77646410125476 671.7672668285957 919.310455237545 634.0443258801494 582.7455510454027 772.7741360700657 0.9049922195479824 0.7793336370955424 0.9800845223914832 1.0296936088824182 1.0958774383083547 0.6104972230313876 0.8692931549765119 1.189623736519817 0.8204781918615636 0.7540955679610977 1.0 9.593902999285014 -11.231523253037622 1.6987251719309018 1.0001596957907577 0.9066917328066989 0.0 0.16721252663471436 1.0914907549403028 5.666099509014116 0.11189680158279668 0.022872069267465506 5.867819512410594e-12 11.231523253037622 -0.0934679629840588 EGQPSPADEKGNDS(ph)DGEGESDDPEK ddPTM_A549_MK2206_60min_R1 2 EGQPSPADEKGNDSDGEGESDDPEK 25 1 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK 288.09 6.960099999999998e-155 277850000.0 20960.1 20585.9 21133.2 19046.8 26947.8 22797.5 21190.2 21771.3 25871.8 27341.9 27454.3 True False 24497.652454754963 21633.634380511874 24130.205537546808 23713.266855043334 22983.814317534812 25209.916318244257 25040.185049608408 24857.448446809944 20011.87860877502 21165.345800225743 20636.639609866812 1.1870950366862112 1.0483118758428276 1.1692894770527296 1.1490856701158614 1.113738222503327 1.2216095640973865 1.2133848108505112 1.2045298516006973 0.9697256426965425 1.025619781144317 1.0 14.332920446586034 -8.76689448241896 24.999942476821786 0.9857037634575077 1.1612184419447085 0.6920110607485714 0.0487866368686886 48.50233039199595 222278.56978151837 0.00844585375664646 0.009116912362261276 1.7104308363750864e-09 8.76689448241896 0.17551467848720081 EGQPSPADEKGNDS(ph)DGEGESDDPEK ddPTM_A549_PD325901_60min_R1 2 EGQPSPADEKGNDSDGEGESDDPEK 25 1 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK 246.81 1.9930999999999994e-112 348660000.0 19403.6 18193.1 17766.3 16137.400000000001 20549.8 16145.8 18086.8 17781.8 18813.6 18175.9 18837.0 True False 21373.439187824646 19726.296385690002 18972.0279554408 17134.17054730549 19106.45294096138 16014.313957922926 18775.103071476733 17427.128049447754 18022.929818056353 17028.2705720815 16520.16841758136 1.2937785286182832 1.1940735643285916 1.1484161345019996 1.037166820228702 1.156553157207986 0.9693795821645447 1.136495863534635 1.0549001444138533 1.0909652590996408 1.0307564754581677 1.0 14.011940774174295 -2.0000000000000777 0.40931608670269387 1.042792090191876 5.447539491993404 0.6761898971165738 0.05180824649157878 26.877629608796564 0.308206218533837 0.011270945148745772 97.31781568283637 0.00999999999999821 2.0000000000000777 4.4047474018015285 EGQPSPADEKGNDS(ph)DGEGESDDPEKK ddPTM_A549_MK2206_60min_R1 4 EGQPSPADEKGNDSDGEGESDDPEKK 26 2 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(1)DGEGESDDPEKK;EGQPSPADEKGNDS(1)DGEGESDDPEKK;EGQPSPADEKGNDS(1)DGEGESDDPEKK;EGQPSPADEKGNDS(1)DGEGESDDPEKK 168.26 1.4947e-48 558102000.0 18165.6 19305.5 17553.9 15720.6 24195.7 17232.8 17874.100000000002 19231.6 26152.4 26814.3 25825.5 True False 21231.509173720395 20288.067489542464 20043.30697601609 19572.147705724565 20636.54458184997 19056.36345779315 21121.592603902067 21957.7381943049 20228.923156801127 20756.931006659855 19412.315602459912 1.0937133729182702 1.0451132108614378 1.0325046937458724 1.008233541352707 1.0630645516207722 0.9816635917138266 1.088051164860804 1.1311241092496165 1.0420664680641054 1.0692661005382353 1.0 14.244684600070325 -10.05871622474949 1.141585714361124 1.0057538055024593 1.0518986812066047 0.0 0.04362911274327224 0.5432998292520845 1.4214011594419773 0.013618787165620674 0.00743782968411376 8.735419688249165e-11 10.05871622474949 0.04614487570414538 EGQPSPADEKGNDS(ph)DGEGESDDPEKK ddPTM_A549_PD325901_60min_R1 2 EGQPSPADEKGNDSDGEGESDDPEKK 26 2 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(1)DGEGESDDPEKK;EGQPSPADEKGNDS(0.999)DGEGES(0.001)DDPEKK 297.73 3.263499999999999e-171 395651000.0 24070.6 25263.1 26062.2 26629.1 31208.2 25246.1 26784.5 29844.4 28684.5 29725.5 27753.9 True False 26514.22959216082 27392.110097857152 27830.937616740073 28273.919027925975 29016.243694445253 25040.504131917776 27803.798804540795 29249.13002952113 27478.990218035735 27848.626857014428 24340.346246467667 1.0893119318714963 1.1253788183819433 1.1434076300693121 1.1616071004753745 1.1921048041235718 1.0287653215102361 1.1422926577544374 1.2016727179370277 1.1289482055754878 1.1441343756996016 1.0 14.571062070382885 -10.455429248182162 0.7795143832475191 0.9990122971312665 1.1360404988050758 0.0 0.06128427381557479 0.3912546182262505 0.42690127844274717 0.031011276329541603 0.008903886969356165 3.504053689197479e-11 10.455429248182162 0.13702820167380936 EGQPSPADEKGNDS(ph)DGEGESDDPEKKK ddPTM_A549_PD325901_60min_R1 1 EGQPSPADEKGNDSDGEGESDDPEKKK 27 3 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(1)DGEGESDDPEKKK 169.98 8.4541e-49 157180000.0 7954.3 8749.2 9736.2 8443.1 10356.0 10023.0 11065.0 11304.0 10505.0 10686.0 11709.0 True False 8761.814680353831 9486.52578932007 10396.957080526778 8964.611111328655 9628.6302862605 9941.376011115055 11486.084630000332 11078.532852183556 10063.511382121544 10011.284136315824 10268.867229466492 0.8532406237770631 0.9238142413701197 1.0124736105938474 0.872989289958363 0.9376526223487599 0.9681083403813322 1.1185347296185735 1.0788466346505805 0.980002093438731 0.9749161141735737 1.0 13.325989424636383 -7.383313864573684 3.86008705142618 1.0081125826784807 0.9227715374981573 0.4392079108034477 0.05655247034003789 0.225261998588243 5.923321573726647 0.00894661239783099 0.014592933834811622 4.137005853898311e-08 7.383313864573684 -0.08534104518032337 EGRCS(ph)HSLN ddPTM_A549_MK2206_60min_R1 1 EGRCSHSLN 9 1 B4DP61;Q16637-2;Q16637;A0A0G2JRX5;A0A0G2JRY6;U3KPX7 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 EGRCS(0.925)HS(0.075)LN 58.172 0.0033315 7280300.0 440.21 606.89 625.21 548.42 810.57 340.59 483.43 501.35 770.36 783.65 1024.3 True False 514.5066858988116 637.7781087632245 713.874179212313 682.7829246195089 691.3362267555865 376.63100773465567 571.2629733807231 572.4178978199815 595.8746900121339 606.6229207314376 769.9380407581541 0.6682442724770158 0.8283499125919375 0.9271839309425012 0.8868024288645044 0.8979115073660099 0.48917054074090044 0.7419596683626689 0.7434596909334736 0.7739255088959874 0.7878853733919928 1.0 9.588598542221842 -10.528502679332695 0.8535973212241893 0.9989703020923684 0.7768288563027663 0.028307042953505057 0.13131021070013324 0.5853907451685296 0.7701030436630903 0.07954857120137289 0.022912649151568428 2.9614016952914935e-11 10.528502679332695 -0.22214144578960204 EGRCS(ph)HSLN ddPTM_A549_PD325901_60min_R1 1 EGRCSHSLN 9 1 B4DP61;Q16637-2;Q16637;A0A0G2JRX5;A0A0G2JRY6;U3KPX7 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 EGRCS(0.753)HS(0.247)LN 52.693000000000005 0.006529699999999999 10315000.0 1092.9 1125.5 711.25 942.13 860.02 680.96 650.85 1046.0 549.4 1059.8 1118.6 True False 1203.8504034495438 1220.3498349425936 759.5197020936979 1000.3232303675267 799.6151621079327 675.4144875315687 675.618452908786 1025.1367094288746 526.3106285899647 992.8840471334 981.0192913896333 1.227142436459395 1.2439610980676474 0.7742148485355708 1.0196774305534286 0.8150860733587226 0.6884823707950032 0.6886902824833945 1.0449709994762164 0.5364936583911977 1.0120943144012593 1.0 9.938137696574493 -5.657563549329759 1.0913126266150541 0.7885889469576683 1.3671000644963354 0.3806769309543677 0.1720454361597307 0.7304410242621512 1.0517608144019908 0.02875005679317836 0.4116575130704826 2.2000697548488245e-06 5.657563549329759 0.578511117538667 EGREES(ph)EAEAPR ddPTM_A549_PD325901_60min_R1 1 EGREESEAEAPR 12 1 P48681 P48681 NES Nestin 1 EGREES(1)EAEAPR 45.864 0.012345 1043600.0 350.12 244.23 324.5 361.95 404.68 177.53 176.54 409.17 422.82 367.28 190.53 True False 385.6639246552788 264.8121192252593 346.5225213770196 384.30682945190796 376.2566728702105 176.08425453988391 183.25832630639474 401.00878336234473 405.05034579615716 344.0898781196031 167.09601786918185 2.308037795114974 1.5847901260733732 2.073792815627176 2.299916146133289 2.251739315324551 1.0537908490299206 1.096724677483734 2.399870376781159 2.424057442908471 2.0592344599677315 1.0 7.384533542151452 -10.988505233349917 1.2767135946743424 1.002526585507279 1.9702976672026657 0.0 0.5624170766138846 0.4290991982859394 1.2499598506390812 0.3569034392163447 0.08272991608736968 1.0268210581600156e-11 10.988505233349917 0.9677710816953868 EGREPGPT(ph)PR ddPTM_A549_MK2206_60min_R1 2 EGREPGPTPR 10 1 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 EGREPGPT(1)PR;EGREPGPT(1)PR 76.58800000000001 0.00057913 100624000.0 2401.3 2127.7 2083.46 1954.52 2524.77 2138.4 1556.12 1592.44 2678.6 2767.4 2929.7 True False 2806.58073385161 2235.990841858511 2378.925956753228 2433.3774877417377 2153.3796775425963 2364.68406864496 1838.8468612564586 1818.173246642968 2071.9013768452414 2142.242417957228 2202.1746343934024 1.2744587509176781 1.0153558246185246 1.0802621733986653 1.1049884281370905 0.9778423763089765 1.0737949805222062 0.8350140958566513 0.8256262778831757 0.9408433575096349 0.9727849846691733 1.0 11.104713165091784 -2.0000000051819202 0.47205457659343275 0.9569898865203647 8.405906784607312 0.5604710348184412 0.07993330798694813 50.947473846160975 0.5177621581201352 0.016162170179392095 373.77517859143853 0.009999999880681879 2.0000000051819202 7.448916898086948 EGREPGPT(ph)PR ddPTM_A549_PD325901_60min_R1 3 EGREPGPTPR 10 1 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 EGREPGPT(1)PR;EGREPGPT(1)PR;EGREPGPT(1)PR 69.345 0.0014454000000000001 106377200.0 3285.53 2603.76 2496.16 3053.5 3185.5699999999997 3194.72 2759.4199999999996 3047.95 3386.25 2885.74 3432.51 True False 3619.07458692065 2823.1879930965147 2665.564428229463 3242.1077599983473 2961.8265528198963 3168.703259526038 2864.4312381125615 2987.1562461794792 3243.9376885015804 2703.5338839165297 3010.3330304736533 1.2022173461489793 0.9378324472798637 0.8854716077078211 1.0769930526551164 0.9838866739451333 1.0526088733203935 0.9515330061876459 0.9923009234993089 1.077600935067032 0.8980846492891682 1.0 11.555707384549162 EGRGES(ph)ENAGTNQETR ddPTM_A549_MK2206_60min_R1 2 EGRGESENAGTNQETR 16 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 EGRGES(1)ENAGTNQETR;EGRGES(1)ENAGTNQETR 128.29 1.5546e-10 184873000.0 1058.65 1280.42 1250.5900000000001 1024.25 1851.8600000000001 1094.09 1671.28 1370.25 2138.55 2125.6000000000004 2165.27 True False 1237.3242384924856 1345.5879088839954 1427.942466980896 1275.191295980329 1579.4538471441092 1209.8658776018353 1974.9299426012756 1564.4871337146303 1654.1718395626042 1645.425483706687 1627.5737005881165 0.7602262423172506 0.8267446865218904 0.8773442741578555 0.7834921979382834 0.9704346086284023 0.743355509593609 1.2134196699588127 0.9612388877685293 1.0163422024851327 1.0109683408573877 1.0 10.66850715835442 -7.73881779036998 24.999991718983253 1.017713098086313 0.833764021166687 0.6070713913537729 0.08452422831015824 128.80689496517994 142349.165256233 0.01171573746881926 0.017370326472864142 1.8246610841056275e-08 7.73881779036998 -0.18394907691962592 EGRGES(ph)ENAGTNQETR ddPTM_A549_PD325901_60min_R1 4 EGRGESENAGTNQETR 16 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 EGRGES(1)ENAGTNQETR;EGRGES(1)ENAGTNQETR;EGRGES(0.879)ENAGT(0.108)NQET(0.012)R;EGRGES(1)ENAGTNQETR 148.01 4.3475000000000005e-15 337085000.0 2595.5 2510.5299999999997 2683.17 2569.7 3033.91 3077.1299999999997 3002.3900000000003 2863.6800000000003 2702.37 2898.0099999999998 3089.71 True False 2858.9932492938888 2722.101173805801 2865.2660514119493 2728.4245327878657 2820.8186280213004 3052.070873499198 3116.64759442085 2806.5616558864995 2588.798786644819 2715.02915402252 2709.695257285412 1.055097705768598 1.004578343814506 1.0574126532156198 1.0069119490289904 1.0410095454229094 1.1263520742021669 1.1501838024188467 1.0357480784382112 0.9553837390697182 1.001968448932686 1.0 11.403914894350251 -8.601919364419429 5.763070516379847 0.9792304717102769 1.062212825006326 0.37852957547981414 0.04298251303354296 0.15500809760644396 8.661380614222294 0.007996196101826267 0.009079538879748507 2.5008096446347474e-09 8.601919364419429 0.0829823532960492 EGRPPEPT(ph)PAK ddPTM_A549_MK2206_60min_R1 2 EGRPPEPTPAK 11 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EGRPPEPT(1)PAK;EGRPPEPT(1)PAK 72.898 0.0006895 292180000.0 11348.900000000001 11334.6 11816.8 9519.5 15926.1 12551.6 10428.0 12053.0 16781.0 16420.4 17786.0 True False 13264.31686603446 11911.482726009068 13492.599927889925 11851.777927346599 13583.391787177101 13879.801980922222 12322.632617781639 13761.549660764413 12980.130293750475 12711.020235536915 13369.24533137218 0.9921515042370046 0.890961488907505 1.0092267434294353 0.8864956572780737 1.0160178417328019 1.038188890763488 0.9217148995587233 1.0293437901443587 0.9708947642161514 0.9507657254003202 1.0 13.70663040987111 -6.794498552111224 24.999745823510818 0.9900221045038029 0.9454780005138668 0.17629325390019468 0.04661999810613601 220.76249067794336 166942.72526129257 0.0058351782955996185 0.011027942286724008 1.6050976093022027e-07 6.794498552111224 -0.044544103989936135 EGRPPEPT(ph)PAK ddPTM_A549_PD325901_60min_R1 2 EGRPPEPTPAK 11 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EGRPPEPT(1)PAK;EGRPPEPT(1)PAK 61.641000000000005 0.0030419 365420000.0 11773.9 12600.1 13511.6 12799.5 15460.8 12112.5 14341.9 15037.2 15243.3 14870.7 15566.8 True False 12969.177660512923 13661.9546470548 14428.57842785127 13590.096045226404 14374.886744864456 12013.859815886575 14887.688852688812 14737.271249544816 14602.677111003657 13931.761464150468 13652.182286075582 0.9499710294478501 1.0007158094416293 1.056869746206624 0.9954522845104038 1.052936918336198 0.879995561452472 1.0904988331333207 1.0794809899788667 1.0696221896991167 1.0204787170443834 1.0 13.736843962317556 EGRPPEPT(ph)PAKR ddPTM_A549_MK2206_60min_R1 5 EGRPPEPTPAKR 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR 69.729 0.0011959000000000002 721564500.0 14978.8 15011.869999999999 15179.4 12992.49 20967.499999999996 14871.539999999999 14579.140000000001 14997.599999999999 21414.8 20980.6 22735.899999999998 True False 17506.855243499984 15775.910062118963 17332.067170927174 16175.650633255042 17883.208525479287 16445.236491870684 17227.981022555152 17123.555728223713 16564.38199240854 16241.067888340476 17089.948551082016 1.0243948477183433 0.9231104479316963 1.014167311219309 0.9465008384844384 1.046416756143309 0.9622753657049182 1.0080768219436447 1.0019664879061072 0.9692470368121617 0.950328658965577 1.0 14.060860433368033 EGRPPEPT(ph)PAKR ddPTM_A549_PD325901_60min_R1 5 EGRPPEPTPAKR 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR 80.411 0.0002836 1016676000.0 26332.2 27095.8 31072.4 30235.5 34201.9 28581.8 31317.100000000002 31223.0 29433.2 33484.0 35753.399999999994 True False 29005.425559258896 29379.258158718385 33181.15991752019 32103.0781651973 31799.67653414958 28349.039297065607 32508.889377874693 30600.23277103034 28196.22496071012 31369.814525584796 31355.95845947623 0.9250371216285698 0.9369593404930521 1.0582090788391243 1.0238270409334365 1.0141509970185347 0.9041037394440772 1.0367691174195324 0.9758984982257016 0.8992302052303812 1.000441895792357 1.0 14.936451998753151 -8.535925672482056 24.860658310191802 0.9516326897349613 0.9873959739437209 0.002725238578457967 0.05251241367362749 453.98895938656324 865063.2850227492 0.009646359520542176 0.010940834453962456 2.9112153166443934e-09 8.535925672482056 0.03576328420875963 EGRPSGEAFVELES(ph)EDEVK ddPTM_A549_MK2206_60min_R1 2 EGRPSGEAFVELESEDEVK 19 1 P31943;G8JLB6;E9PCY7;D6RBM0;D6RIU0;D6RIH9;D6RJ04;D6RDU3;E7EN40;D6RIT2;D6RFM3;D6R9T0;D6RAM1;E7EQJ0;D6RDL0 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed 1 EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK 253.13 1.0579999999999997e-97 72497000.0 8777.3 9377.5 7925.6 7754.5 13979.2 12290.0 10792.6 12652.4 15292.9 12108.2 12475.599999999999 True False 10258.693655618094 9854.774695459031 9049.569256354036 9654.352848112734 11922.878198134265 13590.519642558253 12753.475718322801 14445.916446349933 11829.082567743084 9372.949210489885 9377.56421095619 1.0939614408219613 1.0508885328607291 0.965023438152634 1.0295160481901218 1.2714259193452688 1.449259033244464 1.3599987620903087 1.540476409585357 1.2614237878448953 0.9995078678895194 1.0 13.194997521142371 -6.748909015139413 24.151873505700287 1.2099777420066906 1.031005649661836 0.2823182623700722 0.1630718355115034 228.15827471256264 439762.9318994955 0.02821612949373675 0.05838688653265696 1.7827522156011267e-07 6.748909015139413 -0.17897209234485456 EGRPSGEAFVELES(ph)EDEVK ddPTM_A549_PD325901_60min_R1 2 EGRPSGEAFVELESEDEVK 19 1 P31943;G8JLB6;E9PCY7;D6RBM0;D6RIU0;D6RIH9;D6RJ04;D6RDU3;E7EN40;D6RIT2;D6RFM3;D6R9T0;D6RAM1;E7EQJ0;D6RDL0 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed 1 EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK 245.41 3.9742999999999996e-86 113077000.0 20337.0 19326.6 19119.6 18867.0 25262.0 18511.7 19617.5 19579.2 20291.9 20880.5 21774.1 True False 22401.597268691876 20955.320408708594 20417.17103149481 20032.371739934093 23487.68426916887 18360.946852734567 20364.054697607902 19188.677496414726 19439.102009983086 19562.101666511564 19096.023737392286 1.1731027137773653 1.09736564516704 1.069184418299374 1.0490336635217061 1.2299777478374825 0.9615062855615145 1.0664028793456442 1.0048519922417678 1.0179659533999745 1.0244070669123981 1.0 14.220984644431004 -7.2872502760493525 24.99854846417258 1.0102692815638277 1.115087598295766 0.5323774492345636 0.051586236859207026 444.6041507661434 430610.001266492 0.007158429308728824 0.01144607256379298 5.1611885360008556e-08 7.2872502760493525 0.10481831673193831 EGRPSGEAFVELESEDEVK ddPTM_A549_MK2206_60min_R1 2 EGRPSGEAFVELESEDEVK 19 1 P31943;G8JLB6;E9PCY7;D6RBM0;D6RIU0;D6RIH9;D6RJ04;D6RDU3;E7EN40;D6RIT2;D6RFM3;D6R9T0;D6RAM1;E7EQJ0;D6RDL0 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed 0 ; 129.43 1.8761e-16 3730400.0 1791.98 1815.0900000000001 1688.9299999999998 1512.0 2430.24 1712.98 1682.0700000000002 1675.53 2489.42 2539.2 2800.1000000000004 False True 2094.422414295343 1907.4703281237805 1928.4456702500772 1882.4400678762584 2072.754915319462 1894.2464066159014 1987.6803459332534 1913.0415085954207 1925.5703447868602 1965.5929564490098 2104.7578911714404 0.995089469948325 0.9062659112123077 0.9162315905022057 0.894373683439929 0.9847949372294945 0.8999830405964768 0.944374815873466 0.9089128572078585 0.9148654830390729 0.9338807872838163 1.0 11.039438575295899 -10.757000822625912 0.9446014854929077 1.001196919513475 0.9274288794226565 0.029071554762081897 0.037021229172040974 0.4286336690206165 0.6617246434321334 0.021884605124109325 0.005233685125312572 1.7498433741274097e-11 10.757000822625912 -0.07376804009081839 EGRPSGEAFVELESEDEVK ddPTM_A549_PD325901_60min_R1 2 EGRPSGEAFVELESEDEVK 19 1 P31943;G8JLB6;E9PCY7;D6RBM0;D6RIU0;D6RIH9;D6RJ04;D6RDU3;E7EN40;D6RIT2;D6RFM3;D6R9T0;D6RAM1;E7EQJ0;D6RDL0 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed 0 ; 163.79 6.2453e-27 9469000.0 4410.0 4413.7 3764.4 4363.200000000001 4744.7 4309.2 3916.2999999999997 4419.1 3862.8 4708.6 4152.2 False True 4857.699953529588 4785.657988881499 4019.874821176123 4632.704954453837 4411.448640326399 4274.107303910705 4065.3369395815917 4330.957583783118 3700.459949248846 4411.298192425295 3641.5057229644494 1.3339811394213787 1.3141975745641905 1.1039045732718644 1.272194885000065 1.2114353171289707 1.1737197821650742 1.1163890019297054 1.1893315329619762 1.0161895190532348 1.211394002378274 1.0 11.830319397141237 -7.899607528734896 0.42484005883293585 0.9859711301026949 1.2943770375245838 0.26255952575366037 0.0901639370825918 0.38887232064908706 0.15537135472403707 0.0225748789975431 0.04390107853633527 1.2600636149996434e-08 7.899607528734896 0.3084059074218889 EGS(ph)EFSFS(ph)DGEVAEK ddPTM_A549_PD325901_60min_R1 1 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 2 EGS(0.999)EFS(0.234)FS(0.768)DGEVAEK 75.46300000000001 0.00031531 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EGS(ph)EFSFSDGEVAEK ddPTM_A549_MK2206_60min_R1 1 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGS(0.994)EFS(0.006)FSDGEVAEK 111.12 2.4099e-06 2607400.0 1295.7 1606.6 1008.1 972.89 1936.5 1819.2 1219.0 1642.2 1869.2 1468.1 1984.9 True False 1514.3824831764168 1688.3690776565704 1151.0637386860935 1211.248093674692 1651.6434152660383 2011.7065365127721 1440.476521008422 1874.986879026575 1445.82918449904 1136.4551903602687 1491.994549546871 1.0150053722624826 1.1316187972465046 0.7714932598350842 0.811831446731864 1.1070036521029207 1.3483337034466656 0.965470364114872 1.256698209518273 0.969057953286859 0.7617019718372416 1.0 10.543026549909351 -6.78219148232897 24.997533503728057 1.0393473624965537 0.9352112439929625 0.10457362666805248 0.1714362204793253 469.81692208416723 565930.4047991205 0.022906977042176712 0.043323403369246644 1.65123360162013e-07 6.78219148232897 -0.10413611850359117 EGS(ph)FESR ddPTM_A549_MK2206_60min_R1 2 EGSFESR 7 0 P19174-2;V9GY71;V9GYH5;P19174 P19174-2 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 EGS(0.819)FES(0.181)R;EGS(0.862)FES(0.138)R 86.13600000000001 0.013288 25836000.0 4604.1 4477.7 3754.1 3973.1 6653.7 5684.4 5387.9 5911.0 8331.2 8389.2 8140.2 True False 5381.159520562274 4705.595804196952 4286.487829978638 4946.509678359237 5674.949544103095 6285.919435000667 6366.811687892759 6748.902351678293 6444.196502192597 6494.073893447563 6118.763681909133 0.8794520920087705 0.7690435599122117 0.7005480278070159 0.808416525871753 0.9274666973790426 1.0273185502466373 1.0405389093089197 1.102984639140786 1.053186041691011 1.0613375889394259 1.0 12.579024465331496 -6.9322686783148075 2.278677648570273 1.0337480919994106 0.7777224674015668 0.869670530925801 0.04657010057842745 0.08145606338187526 0.8546960807094481 0.007334079198991611 0.0151582585952175 1.1687760985026716e-07 6.9322686783148075 -0.25602562459784384 EGS(ph)FESR ddPTM_A549_PD325901_60min_R1 2 EGSFESR 7 0 P19174-2;V9GY71;V9GYH5;P19174 P19174-2 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 EGS(0.709)FES(0.291)R;EGS(0.957)FES(0.043)R 93.649 0.012121999999999999 26842000.0 6391.9 6733.6 6774.299999999999 6702.5 8700.2 8041.5 6795.5 7478.799999999999 7737.0 7884.1 8971.6 True False 7040.800982531918 7301.064103571255 7234.044735175172 7116.498202518069 8089.1279660606 7976.012690150827 7054.106471140281 7329.629466994896 7411.840796142256 7386.296580491075 7868.15007565817 0.894848333449328 0.9279263910024647 0.9194085859591391 0.9044690472458705 1.0280851138167881 1.0137087642527758 0.8965393902390971 0.9315568966675782 0.9420055190701553 0.9387589852082494 1.0 12.941808760242806 EGS(ph)FRVTTATEQAEREEIMK ddPTM_A549_MK2206_60min_R1 1 EGSFRVTTATEQAEREEIMK 20 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-8;P49757-7;P49757-6;P49757-5;G3V3M5;G3V3R1 P49757-4 NUMB Protein numb homolog 1 EGS(0.997)FRVT(0.002)T(0.001)ATEQAEREEIMK 63.906000000000006 0.0007373 10198000.0 1573.7 2054.3 1926.1 1887.9 2218.2 1268.8 1520.6 1230.7 2726.6 3041.0 3370.7 True False 1839.302086728971 2158.85509537526 2199.24994254864 2350.4355847510524 1891.905718431771 1403.0635738387236 1796.8733370347875 1405.155493860679 2109.029453485493 2354.035987933776 2533.6621634125845 0.7259460686154063 0.8520690432016803 0.8680123081549572 0.9276831057796812 0.7467079651548993 0.5537690044472781 0.7092000516022161 0.5545946551801041 0.832403579269955 0.9291041331110734 1.0 11.307008454104384 -9.719109630209656 1.16563275454844 0.9678143173355501 0.7520197242689426 0.33782015280399447 0.11452013196414641 0.3396393188522905 0.9429879812601679 0.03564368228696201 0.024075411496759676 1.9093712096404535e-10 9.719109630209656 -0.21579459306660753 EGS(ph)FRVTTATEQAEREEIMK ddPTM_A549_PD325901_60min_R1 2 EGSFRVTTATEQAEREEIMK 20 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-8;P49757-7;P49757-6;P49757-5;G3V3M5;G3V3R1 P49757-4 NUMB Protein numb homolog 1 EGS(1)FRVTTATEQAEREEIMK;EGS(0.995)FRVT(0.003)T(0.001)ATEQAEREEIMK 104.33 5.2683e-10 48849000.0 4156.8 4185.200000000001 4045.2 5348.9 4735.6 6286.9 5560.1 5949.1 5993.700000000001 5991.799999999999 5910.299999999999 True False 4578.795275925576 4537.901491960678 4319.731597763696 5679.289404766711 4402.987792933101 6235.701570815053 5771.6926481034625 5830.440533521337 5741.805632653204 5613.476725433014 5183.370568478589 0.8833625177737453 0.8754730984423196 0.8333827459748095 1.0956749724405066 0.8494449190472323 1.2030205999038464 1.11350183666254 1.1248357524306185 1.107735894394779 1.0829780837144871 1.0 12.339674822933327 -6.4848871598754485 1.2655443693333304 1.0679978309869425 0.8609177591774829 0.5040900008102864 0.08863483398479614 0.32898456337821147 0.9960089764505065 0.013647320085180102 0.04892130956283782 3.2742575689393763e-07 6.4848871598754485 -0.20708007180945953 EGS(ph)GGPQESSR ddPTM_A549_MK2206_60min_R1 2 EGSGGPQESSR 11 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 EGS(1)GGPQESSR;EGS(1)GGPQESSR 210.4 7.2921999999999995e-31 137702000.0 4780.1 5948.1 4670.8 4514.0 6719.700000000001 4360.799999999999 3338.0 3666.0 6955.9 8613.0 8296.2 True False 5586.864017775406 6250.832883610759 5333.189674293228 5619.93020264116 5731.241031532767 4822.256961535232 3944.471392228146 4185.666726654142 5380.399756289789 6667.317318011706 6236.024576528161 0.895901539388389 1.0023746389868853 0.8552226837538256 0.9012039855958995 0.9190536312356187 0.773290243224149 0.6325298022517076 0.67120754180614 0.8627932251167088 1.0691614884115264 1.0 12.606410898452344 -4.2694632875761656 17.31567054780013 0.8858457761427089 0.8582597540012714 0.0 0.13004581844002175 0.0 0.0 0.017920827847743667 0.0 5.3769588450536304e-05 4.2694632875761656 -0.02758602214143746 EGS(ph)GGPQESSR ddPTM_A549_PD325901_60min_R1 2 EGSGGPQESSR 11 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 EGS(1)GGPQESSR;EGS(1)GGPQESSR 226.53 1.2625e-39 291550000.0 7505.1 7165.5 8095.6 7907.4 8930.7 8955.7 8105.6 8273.5 8820.1 9346.7 8650.7 True False 8267.01222703739 7769.361832324437 8645.016098797538 8395.822138991625 8303.438441242432 8882.767748452876 8414.063043554515 8108.478552064808 8449.421869723968 8756.547766882204 7586.718741305471 1.089669000384593 1.0240740558925134 1.139493421804373 1.1066473432422157 1.0944703137648717 1.1708312976057933 1.1090516638958308 1.0687727894693981 1.1137122856184924 1.1541943316295178 1.0 12.889260339051697 -10.751568775226643 0.7603545869458228 0.9921347382104657 1.1031135258135072 0.0 0.05765252256756366 0.5067629494737638 0.4590887590358682 0.03523140491622515 0.0068324838557298805 1.771867428552274e-11 10.751568775226643 0.11097878760304147 EGS(ph)PANWK ddPTM_A549_MK2206_60min_R1 2 EGSPANWK 8 0 O96019-2;O96019 O96019-2 ACTL6A Actin-like protein 6A 1 EGS(1)PANWK;EGS(1)PANWK 103.69 0.0021201999999999996 57409000.0 37287.0 34670.0 29168.0 26123.0 48387.0 40039.0 37108.0 40546.0 50653.0 48842.0 52702.0 True False 43580.13402037438 36434.55491245691 33304.46099592894 32523.136172706043 41269.33639787129 44275.90040426283 43850.04326626783 46293.51966691728 39180.1763762197 37808.55827775778 39614.638898795485 1.100101761162323 0.9197245241976629 0.8407109574067476 0.8209878236122187 1.0417698493555148 1.1176651267067104 1.1069151325168618 1.1685962804099894 0.9890327784209842 0.9544087571856519 1.0 15.273746031168736 -6.7920711782302545 24.982592003357826 1.0288578234659371 0.9146435674737536 0.3117972031569476 0.09060038070043772 216.72068821048097 176751.84493338448 0.013884523259000081 0.02624141080263949 1.6140939949357e-07 6.7920711782302545 -0.11421425599218349 EGS(ph)PANWK ddPTM_A549_PD325901_60min_R1 2 EGSPANWK 8 0 O96019-2;O96019 O96019-2 ACTL6A Actin-like protein 6A 1 EGS(1)PANWK;EGS(1)PANWK 100.58 0.0023622 64693000.0 24684.0 20511.1 19518.7 17808.699999999997 18578.300000000003 19947.3 17084.0 16936.0 25228.0 23136.0 28762.0 True False 27189.901508599618 22239.6423807117 20843.356357478053 18908.702952507796 17273.4242996556 19784.855802306225 17734.140968723514 16598.198193965014 24167.754892733225 21675.189011585528 25224.45633734009 1.077918237165336 0.8816698399081081 0.8263153853041963 0.7496178589394213 0.6847887648656881 0.7843521199312609 0.7030534466850504 0.6580200568840204 0.9581080586841979 0.8592926135537544 1.0 14.622535554812668 -8.895667823884702 8.110073534186842 0.9815917458703131 0.7910558495997274 0.21467800629498213 0.11504382502689632 0.1902669445351999 13.414552629025176 0.01966291087624476 0.020885551793914336 1.2715462930586472e-09 8.895667823884702 -0.19053589627058565 EGS(ph)PANWKR ddPTM_A549_PD325901_60min_R1 2 EGSPANWKR 9 1 O96019-2;O96019 O96019-2 ACTL6A Actin-like protein 6A 1 EGS(1)PANWKR;EGS(1)PANWKR 58.674 0.0045578 36079000.0 10221.8 10033.8 8816.8 8983.4 8537.0 10720.3 8948.5 8101.4 11336.400000000001 11144.599999999999 13561.2 True False 11259.509611108555 10879.383539624156 9415.161067725443 9538.284215218317 7937.390571051163 10632.99743110414 9289.040064307093 7939.811221574644 10859.97053139293 10440.928054050662 11893.258371529671 0.9467136136604754 0.9147521393857422 0.7916384874193645 0.8019908352492584 0.667385700629514 0.8940356880295841 0.7810340761236122 0.6675892319451437 0.913119869437105 0.8778862552119756 1.0 13.537856400978617 -8.966517734254696 7.341832635643074 0.9621762919683257 0.8069400795148701 0.26761075984971194 0.08902514760809849 0.14326235759783204 22.42718555030569 0.015681795650521083 0.0163563647811165 1.0801455126384322e-09 8.966517734254696 -0.15523621245345554 EGS(ph)PEPWLPLT(ph)DGRSPR ddPTM_A549_PD325901_60min_R1 2 EGSPEPWLPLTDGRSPR 17 1 Q494U1-3;Q494U1;Q494U1-2;J3KSM5 Q494U1-3 PLEKHN1 Pleckstrin homology domain-containing family N member 1 2 EGS(1)PEPWLPLT(0.69)DGRS(0.31)PR;EGS(1)PEPWLPLT(0.692)DGRS(0.308)PR 61.136 0.0018468 3265800.0 1050.21 571.03 827.12 502.22999999999996 569.02 613.37 428.18999999999994 869.87 670.3 493.23 959.4100000000001 True False 1156.82654607626 619.1527021299594 883.2533370766118 533.2516064529126 529.053998212432 608.3749180821753 444.4850047645587 852.5197604501861 642.1296220310395 462.0873736248418 841.4086522010798 1.3748688500529012 0.7358525497810002 1.0497317026228201 0.6337605455541193 0.6287717589169723 0.7230433351151063 0.5282629357349842 1.0132053648605113 0.7631602317747304 0.5491830544124381 1.0 9.716662843183794 -5.255132297170423 24.667192275847828 0.8320553797567289 1.3748691435944673 0.4303320051822592 0.18762645314565954 432.71827127552416 1692317.7101493638 0.024353253058492473 0.3117940637470332 5.5573494045269e-06 5.255132297170423 0.5428137638377384 EGS(ph)PEPWLPLTDGR ddPTM_A549_MK2206_60min_R1 2 EGSPEPWLPLTDGR 14 0 Q494U1-3;Q494U1;Q494U1-2;J3KSM5 Q494U1-3 PLEKHN1 Pleckstrin homology domain-containing family N member 1 1 EGS(0.995)PEPWLPLT(0.005)DGR;EGS(0.95)PEPWLPLT(0.05)DGR 67.01899999999999 0.0039448 3636300.0 1177.2 1134.4 1133.24 1035.84 2032.6399999999999 1857.2 1376.75 1719.34 2194.9 2108.46 2293.3 True False 1375.882580223261 1192.1361145858425 1293.9504724021706 1289.620846500625 1733.641348621927 2053.7276712904145 1626.8876540593478 1963.061710257918 1697.7586545350646 1632.1574216109339 1723.8103181398744 0.7981635599605561 0.6915703555320694 0.7506339060543761 0.7481222457771493 1.0057030813533248 1.1913884315917929 0.9437741710554827 1.1387921800910292 0.9848871634363335 0.9468312171214747 1.0 10.75138531887199 -6.764115556616798 6.719681334479569 1.0164498691944008 0.7424882072856537 0.7636281248648741 0.07552301444950323 0.049780967562590026 10.644563875576441 0.010242970203589932 0.02037929848379131 1.721410482962206e-07 6.764115556616798 -0.27396166190874716 EGS(ph)PGDQAAALLTAR ddPTM_A549_MK2206_60min_R1 2 EGSPGDQAAALLTAR 15 0 C9J0V9;F8WE52;C9JNK1;F8WDU5;Q8N720-2 C9J0V9 ZNF655 Zinc finger protein 655 1 EGS(0.985)PGDQAAALLT(0.015)AR;EGS(1)PGDQAAALLTAR 101.53 7.0378e-06 6797300.0 1638.0900000000001 2120.7 1902.85 1753.76 2871.5 2002.92 2059.63 1985.73 2909.8 2769.7 3176.7 True False 1914.559544544615 2228.6345717579297 2172.7027429410105 2183.431278729279 2449.1061538530494 2214.8676649693075 2433.838110717452 2267.2133085430783 2250.7349459957773 2144.022846359809 2387.8377175402 0.8017963408823584 0.9333274851080452 0.909903854429099 0.9143968464400135 1.0256585428158678 0.9275620569604389 1.0192644553854515 0.9494838329627435 0.9425828771623318 0.8978930312602844 1.0 11.2214890760154 -3.87393215206318 0.6384225719227204 0.973052448831775 5.607168190154826e-17 0.5112822450944855 0.0421145362766529 7.23423380421474 0.5194763884587478 0.005892235238238201 7.720886001332642 0.00013368043433586378 3.87393215206318 -0.9730524488317749 EGS(ph)PGDQAAALLTAR ddPTM_A549_PD325901_60min_R1 2 EGSPGDQAAALLTAR 15 0 C9J0V9;F8WE52;C9JNK1;F8WDU5;Q8N720-2 C9J0V9 ZNF655 Zinc finger protein 655 1 EGS(1)PGDQAAALLTAR;EGS(1)PGDQAAALLTAR 171.78 2.9338e-27 14470700.0 4431.4 4509.1 3772.0 5083.0 4702.5 3747.9 4700.0 4713.9 4888.1 4870.2 5087.7 True False 4881.272465775739 4889.097681687826 4027.990602878635 5396.965365669424 4372.212622744301 3717.3783450122855 4878.861071938688 4619.877566516986 4682.670155825641 4562.694740846467 4461.945153587554 1.093978589551024 1.0957323573905489 0.902743190296724 1.2095543938566977 0.9798893693771416 0.8331295471042238 1.0934381539889435 1.0353954178039255 1.049468336037393 1.0225797457814798 1.0 12.123457064686642 EGS(ph)PIPHDPEFGSK ddPTM_A549_MK2206_60min_R1 4 EGSPIPHDPEFGSK 14 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK 125.98 1.2265e-07 231902500.0 4225.67 6114.7 6578.21 5741.28 12282.4 7917.2 8269.599999999999 9534.6 15352.5 12157.6 13985.0 True False 4938.859788287482 6425.912112004624 7511.099093802443 7147.893857735855 10475.675230396888 8754.992848987979 9772.07927656377 10886.158748487884 11875.183262904717 9411.189716180097 10512.138533635438 0.4698244579335337 0.6112849532417963 0.7145167531582046 0.6799657210438114 0.996531314430277 0.8328460304223386 0.9295995524884192 1.0355798407389423 1.1296638856982313 0.8952688062535837 1.0 13.359768572924299 -6.273020963808791 0.5208694129457103 1.0623928334064727 0.3893125539661459 0.7925388277741913 0.08834354409637142 0.4716348658732226 0.1553686412809163 0.01678768044322211 0.15946477833136233 5.333091515249679e-07 6.273020963808791 -0.6730802794403268 down EGS(ph)PIPHDPEFGSK ddPTM_A549_PD325901_60min_R1 3 EGSPIPHDPEFGSK 14 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK 129.65 3.2126e-09 428957500.0 15498.5 16957.699999999997 16035.6 18525.7 20443.9 19202.1 17805.9 19897.7 18804.5 21205.199999999997 23784.8 True False 17071.896310607317 18386.78489205331 17123.872245896255 19669.99041408265 19007.990991626215 19045.72446403596 18483.513268262344 19500.824764056313 18014.212259410237 19866.300053097923 20859.420384269757 0.8184262072536473 0.8814619271932849 0.8209179320634189 0.9429787621959015 0.9112425293446927 0.9130514709027333 0.8860990827051407 0.9348689659067435 0.8636008061372064 0.9523898405192144 1.0 14.348411450141677 -14.99999999999991 0.2684479922082234 1.816836049111095 0.8755181740605316 0.4160766376798062 0.04044644808381408 24.623382699998977 0.3219801353812047 10.778532355780282 0.01718500821785037 1.0000000000002085e-15 14.99999999999991 -0.9413178750505635 EGS(ph)PLHK ddPTM_A549_MK2206_60min_R1 3 EGSPLHK 7 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 EGS(1)PLHK;EGS(1)PLHK;EGS(1)PLHK 60.019 0.011565 50320200.0 6424.900000000001 7121.1 6013.799999999999 5405.9 8436.3 6454.200000000001 6920.2 6562.3 9582.7 10153.7 10467.4 True False 7509.266046276269 7483.5335733226675 6866.647268832881 6730.345742680069 7195.331445499032 7137.179160048779 8177.510763480296 7492.526121200894 7412.233750427433 7859.972117949088 7868.055694456601 0.9543991982119401 0.9511286986180275 0.8727247919293127 0.8554013855572858 0.9144993026127748 0.9071083679640503 1.0393305641242119 0.9522716173043507 0.9420667618875251 0.9989726081230961 1.0 12.941791454509334 -7.694602383333347 24.925528332017567 0.9746427374915042 0.9072514717379104 0.5083589395229395 0.037004059310759924 41.528297762026696 15486.673522485837 0.006111413930139373 0.009064690620893446 2.020215117535584e-08 7.694602383333347 -0.06739126575359378 EGS(ph)PLHK ddPTM_A549_PD325901_60min_R1 3 EGSPLHK 7 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 EGS(1)PLHK;EGS(1)PLHK;EGS(1)PLHK 66.62100000000001 0.010069 69742300.0 12284.7 12627.2 11857.8 11731.7 14202.099999999999 14109.9 11875.099999999999 13234.0 12854.7 12865.1 13755.599999999999 True False 13531.833700481842 13691.33845916226 12662.541614743986 12456.340464376155 13204.59349058519 13994.993652522437 12327.013428804052 12970.037488127846 12314.461662423408 12052.795390428293 12063.748403932805 1.121693958411006 1.134915782452729 1.0496357509093919 1.0325431240190126 1.0945680437334442 1.1600866649340964 1.021822821237338 1.0751249987855838 1.0207823679751866 0.9990920721207232 1.0 13.558390625388736 -8.595636500229448 1.020499564594808 1.0059656085415312 1.0927262972543392 0.4647604669537133 0.03933392006065487 0.30950843589757154 0.6335105871057339 0.008482028223983125 0.00962174083449299 2.5372513939040905e-09 8.595636500229448 0.08676068871280807 EGS(ph)QGELTPANSQSR ddPTM_A549_MK2206_60min_R1 2 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGS(1)QGELTPANSQSR;EGS(1)QGELTPANSQSR 110.12 2.8894e-06 32321000.0 1597.48 1600.79 1554.08 1581.28 1874.27 1634.71 1062.29 1478.37 1898.56 1924.62 2616.6 True False 1867.0955693637911 1682.2633734730878 1774.4719125258246 1968.693670986356 1598.5673658304556 1807.693927167324 1255.2943424955176 1687.9334748182432 1468.5391913773253 1489.8470052933585 1966.8260055138007 0.9492937169478005 0.855318858280819 0.90220075774434 1.0009495834747555 0.8127650139610882 0.9190919390427187 0.6382335493716399 0.8582017270903933 0.746654349322422 0.7574879532387313 1.0 10.941653620476146 -5.2553236281070195 21.654637587665412 0.867679767477645 0.949293952026689 0.04449882304445407 0.10522599550749843 320.1349903747352 1133291.851629647 0.015828239992716524 0.18662307225610633 5.554901621454928e-06 5.2553236281070195 0.08161418454904401 EGS(ph)QGELTPANSQSR ddPTM_A549_PD325901_60min_R1 2 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGS(1)QGELTPANSQSR;EGS(1)QGELTPANSQSR 204.05 6.6968e-39 29158000.0 2882.4 2944.8 3109.6 2905.6 3613.3 3115.2 3100.8999999999996 2646.8999999999996 3477.7999999999997 4068.2000000000003 4463.3 True False 3175.0191260892693 3192.9686307765005 3320.6361555438534 3085.072312903616 3359.5142732082927 3089.830844041266 3218.906446377587 2594.105503047118 3331.6401603752797 3811.333157716645 3914.3423951898376 0.8111245275811615 0.8157101010632587 0.8483254197753463 0.7881457474682657 0.8582576417782591 0.7893614130021489 0.8223364543513514 0.6627180867557472 0.8511366211778982 0.973684152515688 1.0 11.934554241505044 -10.00373631659268 0.8918206343562052 0.9853721387366295 0.8047847283972552 0.6444725522217445 0.05160092579214017 0.23197367088816265 0.37344695550848184 0.02132070326194968 0.010457208413739401 9.914337146239521e-11 10.00373631659268 -0.1805874103393743 EGS(ph)RGEEDTGQEEGGSR ddPTM_A549_MK2206_60min_R1 1 EGSRGEEDTGQEEGGSR 17 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 EGS(0.988)RGEEDT(0.012)GQEEGGSR 41.136 0.026003 3620600.0 312.57 329.38 318.04 258.47 317.12 310.64 295.28 177.18 336.26 358.03 330.88 True False 365.32417439720047 346.1440351042705 363.1428543316387 321.7951616031594 270.47206808632393 343.5117186138567 348.9285538337709 202.29580759099304 260.0976468968795 277.150774337366 248.71336417656747 1.4688562297675658 1.3917387843241695 1.4600858121714564 1.2938394471424923 1.0874850612945328 1.3811550487089614 1.4029344783662623 0.8133692705285369 1.0457727020741436 1.1143380865557757 1.0 7.958340220100956 -7.446467541203928 0.5114128530363679 0.9970134697691176 1.4588486133212248 0.5229174629624305 0.14527935064969769 0.5344780615509291 0.26994958833861876 0.036535803975942714 0.10125873014652806 3.5771113459998225e-08 7.446467541203928 0.4618351435521072 EGS(ph)RGEEDTGQEEGGSR ddPTM_A549_PD325901_60min_R1 1 EGSRGEEDTGQEEGGSR 17 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 EGS(1)RGEEDTGQEEGGSR 81.57600000000001 6.2413e-05 5401200.0 312.52 332.29 369.65 413.95 270.76 377.07 458.21 430.1 370.05 383.03 399.6 True False 344.2468003349359 360.29324447185644 394.73667188602525 439.5187513513394 251.74275167129116 373.99926693716 475.64743229213286 421.5213180930774 354.49808538353915 358.8454204316913 350.45173327310687 0.9822944721082734 1.0280823584658378 1.1263653005773755 1.25414917268742 0.7183378701543135 1.0671919452191796 1.357240918313453 1.2027942169274022 1.0115461038604108 1.0239510504918612 1.0 8.45307194938133 -8.955945915571386 24.987413064272904 1.0050937008400485 1.092971194371878 0.04964878096374703 0.15575307699025262 308.2412586168901 174834.56941402494 0.027482003188414917 0.029240833732583054 1.1067616048444876e-09 8.955945915571386 0.08787749353182961 EGS(ph)RGPR ddPTM_A549_MK2206_60min_R1 2 EGSRGPR 7 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EGS(1)RGPR;EGS(1)RGPR 63.534 0.021976 341270000.0 5475.9 5077.8 3393.0 2810.5 2602.3 1975.6499999999999 1721.52 1963.0099999999998 3180.5 9104.3 7850.6 True False 6400.098047098667 5336.238330962613 3874.1784201586274 3499.072626168137 2219.5051172459644 2184.711971669667 2034.2979002841807 2241.2726789659964 2460.12182821485 7047.632306789042 5901.079354462527 1.084563969176041 0.9042817441401176 0.6565203054300377 0.592954680997818 0.37611850034985983 0.3702224356663734 0.3447331883015265 0.3798072427667146 0.4168935342912228 1.194295464178001 1.0 12.526763143697838 -5.6184818232643225 2.2833136179824485 0.6099662442272765 1.0830038546679703 0.2668680636673465 0.2641274414644165 0.40177119242475867 3.7151413486675304 0.039892653428745546 0.28061726564567746 2.407233268032714e-06 5.6184818232643225 0.4730376104406938 EGS(ph)RGPR ddPTM_A549_PD325901_60min_R1 2 EGSRGPR 7 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EGS(1)RGPR;EGS(1)RGPR 67.494 0.019503 670820000.0 6845.9 7233.4 5002.8 5808.5 5808.2 4695.7 3644.7 4860.2 5053.5 6957.599999999999 8904.2 True False 7540.890728314785 7842.984003619508 5342.320092280288 6167.27785293938 5400.252069202223 4657.459776054372 3783.401052956366 4763.259498246861 4841.1189690196325 6518.295948608552 7809.039848374369 0.9656617042214983 1.0043467770563632 0.6841199681408227 0.7897613500106854 0.6915385468709586 0.5964190049592242 0.4844899150750227 0.6099673699627032 0.6199377981183465 0.8347115746842404 1.0 12.930929459003282 -5.75476796916991 24.985726757185308 0.7483324152444507 0.985004350005417 0.3485901071903802 0.1378180580220507 192.0385548971586 719201.0024073872 0.025758757464622042 0.0953391534033862 1.7588630720321801e-06 5.75476796916991 0.23667193476096626 EGS(ph)RTDDEVVQREEEAIQLDGLNASQIR ddPTM_A549_PD325901_60min_R1 2 EGSRTDDEVVQREEEAIQLDGLNASQIR 28 2 P14625;Q96GW1;A0A1W2PRR1 P14625 HSP90B1 Endoplasmin 1 EGS(0.5)RT(0.5)DDEVVQREEEAIQLDGLNASQIR;EGS(0.5)RT(0.5)DDEVVQREEEAIQLDGLNASQIR 130.15 9.7496e-28 8455200.0 1469.87 1955.08 1721.8 1682.13 1445.47 2098.5 1560.5700000000002 1747.33 1895.3400000000001 1670.1599999999999 2048.79 True False 1619.0901203388962 2119.8414529538563 1838.6517020245064 1786.0313497055904 1343.9451738007886 2081.410511755458 1619.958345326671 1712.478132396133 1815.6854510223957 1564.7058125687113 1796.8018183498723 0.9010955486597954 1.1797859014304948 1.0232913186347217 0.994005755930182 0.7479651679310001 1.158397376104039 0.9015787544195558 0.9530701243216798 1.010509580121566 0.8708282664170994 1.0 10.811215577510465 -6.126002136776482 4.6463712941117 0.986158802972085 1.0530598783762606 0.03664206942889803 0.11608048042466851 0.4973894515195499 16.578064908878414 0.014022542902862437 0.038964099872402465 7.481658194442118e-07 6.126002136776482 0.06690107540417556 EGS(ph)SPEGSTRR ddPTM_A549_MK2206_60min_R1 1 EGSSPEGSTRR 11 1 Q9Y2I9;F8VZ81;Q9Y2I9-2 Q9Y2I9 TBC1D30 TBC1 domain family member 30 1 EGS(0.5)S(0.5)PEGSTRR 45.28 0.019634 6362400.0 260.28 504.43 395.74 373.21 429.89 236.67 220.58 135.87 616.19 757.89 791.27 True False 304.2089007649594 530.1033324052681 451.86188269778273 464.64646675403367 366.6537504718395 261.71426231116885 260.6565307662327 155.1299885844239 476.6239488532331 586.682122622535 594.7758210589716 0.511468170012912 0.8912657738195259 0.7597179755781985 0.7812127700933631 0.6164570540527841 0.44002169060134017 0.438243320486945 0.26082093974200554 0.8013505794580311 0.9863920183876571 1.0 9.216202189640951 -9.079188643097288 3.4570367746296693 0.9220495388595146 0.598363907172712 0.431928562893225 0.17550129367516115 0.1747770426990086 4.358082808598649 0.036292040991320794 0.03582841136515035 8.333191398406363e-10 9.079188643097288 -0.32368563168680253 EGS(ph)SSSEGRGDTDK ddPTM_A549_PD325901_60min_R1 2 EGSSSSEGRGDTDK 14 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EGS(0.287)S(0.256)S(0.229)S(0.229)EGRGDTDK;EGS(0.264)S(0.264)S(0.236)S(0.236)EGRGDTDK 48.547 0.0082194 13127700.0 1446.17 1599.2800000000002 1221.83 1526.5500000000002 1593.63 1347.16 1017.8800000000001 965.24 1514.97 2158.4 1530.73 True False 1592.9841137859153 1734.0569382736492 1304.7507312606583 1620.841526453406 1481.698926525041 1336.1891756094753 1056.6159804053088 945.9875309838682 1451.3010793500878 2022.118255645151 1342.4599140969538 1.1866157767976888 1.2917010929448236 0.9719103844812665 1.2073667969026205 1.1037193073446447 0.9953289193802881 0.7870745109853604 0.7046672463365249 1.0810759145284046 1.506278313721859 1.0 10.390663294588265 -5.763710125010544 24.99984537850763 1.0094620724653087 1.2391584727668599 0.11226519806325819 0.20216614501164692 53.94964030120805 593996.3142578222 0.0199867920701423 0.06684498714117423 1.7230182401714502e-06 5.763710125010544 0.22969640030155114 EGS(ph)TEFDWGDETSR ddPTM_A549_MK2206_60min_R1 1 EGSTEFDWGDETSR 14 0 I3L2J0 I3L2J0 CIC 1 EGS(0.968)T(0.032)EFDWGDETSR 53.001000000000005 0.020761 1356700.0 599.4 502.63 224.79 293.98 419.9 451.32 511.49 350.18 547.96 587.96 523.13 True False 700.5640660769809 528.21172009369 256.66860214189757 366.0051131972637 358.13326623816664 499.07838283803045 604.4211121661997 399.81908738127316 423.8479349123123 455.1394276440456 393.22238334649313 1.7815976296030676 1.3432900629877147 0.6527314136024922 0.930784026286605 0.9107652092190102 1.2692013577422954 1.5370974231484833 1.0167760135591448 1.077883540873697 1.1574606302179737 1.0 8.619201636132466 -5.439969899853156 3.9871110025321816 1.0487967048496276 1.7485029866372066 0.49580133251392233 0.21391525240595546 0.14160967684398426 3.8978797876162568 0.029297017553677605 0.19898358245438608 3.63103219910237e-06 5.439969899853156 0.699706281787579 EGS(ph)TEFDWGDETSR ddPTM_A549_PD325901_60min_R1 2 EGSTEFDWGDETSR 14 0 I3L2J0 I3L2J0 CIC 1 EGS(0.928)T(0.071)EFDWGDETSR;EGS(0.884)T(0.115)EFDWGDETSR 49.928999999999995 0.026773 1808060.0 664.41 941.98 683.1400000000001 865.06 741.61 1030.64 430.28 767.99 954.32 1270.8600000000001 1927.19 True False 731.8604140872088 1021.3639604790978 729.501988454537 918.4927915061958 689.5218720156091 1022.2468095476025 446.6545408582507 752.6718369735 914.2132491371952 1190.617682713676 1690.1578474639623 0.4330130556653902 0.6043009308341394 0.43161766786997774 0.5434361014767763 0.4079630036036094 0.6048232779449902 0.26426794487180244 0.4453263570043854 0.5409040643801101 0.7044417090984529 1.0 10.722942273843657 -10.318465307754417 0.681986415759334 1.0095588142645218 0.4687789703085494 0.5408556672955391 0.12468648197144701 0.23250604504774006 0.19576981930136994 0.06666445576598828 0.01964792820819281 4.8032444791153914e-11 10.318465307754417 -0.5407798439559723 EGS(ph)YDR ddPTM_A549_MK2206_60min_R1 1 EGSYDR 6 0 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 EGS(1)YDR 83.31299999999999 0.041167 390610000.0 3244.5 3473.1 2536.4 2669.5 3123.0 1661.8 1646.8 1736.1 2942.7 5076.8 4238.1 True False 3792.0922795908646 3649.865955190484 2896.0996595609627 3323.5276198384095 2663.6108370130833 1837.6505729864364 1946.0022434755274 1982.197491583266 2276.1831485262805 3929.9473540092704 3185.662804390445 1.1903621043522388 1.1457163483091428 0.9091042704110398 1.0432766503906066 0.8361245368913885 0.5768503089698654 0.6108625937414245 0.6222245144248861 0.7145084989501306 1.2336356969711484 1.0 11.637377853415224 -6.755253422537442 3.7097805588089456 0.7990199078476062 1.0716522148177312 0.32478096608737406 0.19034703620796 0.20778125965749356 6.160339863326214 0.026236435664040797 0.05458586531505523 1.756898117373251e-07 6.755253422537442 0.27263230697012497 EGS(ph)YDR ddPTM_A549_PD325901_60min_R1 2 EGSYDR 6 0 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 EGS(0.999)Y(0.001)DR;EGS(0.995)Y(0.005)DR 71.491 0.049437 1490780000.0 9128.1 9013.1 9207.5 9244.9 9528.6 9034.1 8546.2 8406.7 10201.8 9393.3 10869.4 True False 10054.777992247946 9772.665568477196 9832.376319195397 9815.936476308723 8859.344007885458 8960.529284846312 8871.430317660082 8239.021773571429 9773.053823715141 8800.205434929398 9532.532706803573 1.0547855749890724 1.025190877289331 1.0314547688021902 1.029730164922789 0.9293798700068823 0.9399946016918452 0.930647771219117 0.864305639118454 1.0252316067837777 0.9231760021812988 1.0 13.218643860612152 -6.560379787827591 24.87528838764783 0.9840964778344071 1.0350558582798512 0.26206978756977684 0.050723281863114277 228.6456181861551 151665.06974945313 0.008142932868610541 0.01695089248167503 2.751821200266669e-07 6.560379787827591 0.050959380445444125 EGSCIFPEELS(ph)PK ddPTM_A549_MK2206_60min_R1 2 EGSCIFPEELSPK 13 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK 148.96 1.0731e-12 10087500.0 4615.9 5278.1 4823.3 4214.4 6737.5 5769.0 5231.0 4876.4 7859.9 6744.9 7998.4 True False 5394.951072079971 5546.732745412138 5507.316467418542 5246.928189191607 5746.422675112284 6379.47175084773 6181.404988839254 5567.644633348678 6079.645199681149 5221.2224054635035 6012.17653539004 0.8973374351739613 0.9225831465130612 0.9160270718932332 0.872716920121377 0.9557973957162729 1.0610918879869287 1.0281476188287333 0.9260614023183332 1.0112220031953423 0.8684412998735701 1.0 12.553671656356906 -6.995585922650676 6.916162241464009 1.0044208670849073 0.9054642676648761 0.29526594670641504 0.05224145975073226 0.06037472089973354 16.070749304419717 0.004625055943522963 0.008550271525617567 1.0102156154408006e-07 6.995585922650676 -0.09895659942003121 EGSCIFPEELS(ph)PK ddPTM_A549_PD325901_60min_R1 4 EGSCIFPEELSPK 13 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK 153.39 1.2948e-13 18194000.0 9327.4 10435.3 11207.300000000001 10160.3 9520.3 10147.6 10209.7 11837.0 8434.1 11512.4 11811.8 True False 10274.31078153103 11314.719353688532 11967.89477296971 10787.878655284483 8851.626971252013 10064.961310026056 10598.235720462213 11600.90174905314 8079.644107372811 10785.505099281529 10359.023481169375 0.9918223276747721 1.0922573323881752 1.1553110961399924 1.0413991893053125 0.8544846903129908 0.9716129448226596 1.0230921611219124 1.1198837197484155 0.7799619454536406 1.0411700599856166 1.0 13.338600389786746 -6.930976592761583 0.6763632095590341 0.9139713755336953 1.0881448554068374 0.0 0.10688791593949508 0.9922101084762466 0.8084921518528084 0.022747356162965568 0.08727341073488476 1.1722585452498314e-07 6.930976592761583 0.17417347987314202 EGSEFS(ph)FSDGEVAEK ddPTM_A549_MK2206_60min_R1 1 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGS(0.029)EFS(0.947)FS(0.024)DGEVAEK 74.789 0.00070832 2687500.0 1394.4 1195.4 1202.5 919.56 1717.1 1716.7 1415.3 1623.4 1948.9 1828.6 2071.0 True False 1629.740630193098 1256.2407540337758 1373.032581856985 1144.8522412806167 1464.5168646286152 1898.360054546766 1672.4416900600643 1853.5219214539902 1507.4772617537867 1415.5179899821453 1556.7135433077583 1.0469110628601388 0.806982607323164 0.8820072181934759 0.7354289722744979 0.9407747950318204 1.2194665246587792 1.0743413245486404 1.1906634521310602 0.9683716495140444 0.9092989497440899 1.0 10.604287777781257 -7.001230004881463 24.99084638784274 1.0261869947665585 0.8611989344063927 0.3765922934917917 0.11204665502131976 43.040096056530984 874514.9625333799 0.016045197134397428 0.030041533198638014 9.971718159646611e-08 7.001230004881463 -0.16498806036016578 EGSEFS(ph)FSDGEVAEK ddPTM_A549_PD325901_60min_R1 1 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGSEFS(0.961)FS(0.039)DGEVAEK 274.38 1.0070999999999997e-91 71687000.0 13037.0 14090.0 13462.0 14657.0 16537.0 14878.0 15801.0 15107.0 14598.0 14826.0 16486.0 True False 14360.506642667857 15277.413748859306 14375.612273582232 15562.329601537827 15375.498169552906 14756.838500785187 16402.315701638978 14805.679033787766 13984.496825912454 13889.88382977901 14458.326513364465 0.9932343573368474 1.0566515934425553 0.9942791276911767 1.0763575983121478 1.0634355335204706 1.0206463719812104 1.134454647049062 1.0240243931482822 0.967227902412217 0.960684060976212 1.0 13.819612956002471 -8.554553977962813 7.499249357204041 0.9849771789251216 1.049486651150469 0.3970511849717734 0.03857395124374887 0.149720620902647 27.967300622720668 0.006214388433979096 0.0070775720645489424 2.788983995176902e-09 8.554553977962813 0.06450947222534742 EGSEFSFS(ph)DGEVAEK ddPTM_A549_MK2206_60min_R1 2 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGSEFSFS(1)DGEVAEK;EGSEFS(0.117)FS(0.883)DGEVAEK 206.63 2.0594e-39 70490000.0 5638.5 5596.4 4673.700000000001 5154.2 6776.0 5449.299999999999 5375.299999999999 6712.8 7494.3 7047.1 7733.6 True False 6590.140951910337 5881.23285584292 5336.500937900202 6416.979231380834 5779.259376112922 6025.941309047411 6351.922430989802 7664.359957087813 5796.853015937918 5455.1552155764875 5813.1336834982485 1.1336640976652197 1.0117147094927448 0.9180076063017328 1.103876081432072 0.9941727974566479 1.0366080735685228 1.092684733712733 1.3184558233788162 0.9971993302671592 0.9384190202028289 1.0 12.505100370989037 EGSEFSFS(ph)DGEVAEK ddPTM_A549_PD325901_60min_R1 1 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGSEFS(0.01)FS(0.99)DGEVAEK 321.82 1.8051999999999993e-163 77929000.0 29993.0 28432.0 30664.0 30222.0 35819.0 30460.0 33207.0 35061.0 31430.0 31688.0 35196.0 True False 33037.86728032037 30828.064422112675 32745.043437611475 32088.74430085802 33303.19700884173 30211.9438589808 34470.71055656762 34361.6808501776 30109.106400769182 29687.21427209207 30867.115125826498 1.07032572190971 0.9987348767918661 1.0608391261745649 1.0395770440500085 1.0789215925454907 0.9787744574063705 1.116745455999093 1.113213227413896 0.9754428386984862 0.9617748257676596 1.0 14.913783032954386 -8.79048704383289 24.999835622987543 0.9884035504141472 1.0548329237545453 0.41556512314968475 0.04075867780702141 159.4135272341286 137198.35960154232 0.006829510418516586 0.007271136218460002 1.6199923218908355e-09 8.79048704383289 0.06642937334039811 EGSFRLS(ph)GGGRPAER ddPTM_A549_MK2206_60min_R1 2 EGSFRLSGGGRPAER 15 2 Q9Y6R0;A0A0C4DGH3;M0QYC2;M0QXQ4 Q9Y6R0;M0QXQ4 NUMBL Numb-like protein 1 EGS(0.028)FRLS(0.972)GGGRPAER;EGSFRLS(1)GGGRPAER 99.09200000000001 2.1559999999999998e-06 18593600.0 1669.3200000000002 2029.33 1401.3899999999999 1567.03 2451.0 1695.7 1698.49 1727.28 2888.8 2614.0 2249.1 True False 1951.0604050444215 2132.6142290307544 1600.128174543502 1950.95242034665 2090.4611468200665 1875.1378484854374 2007.0836473893296 1972.1272295731476 2234.491412465669 2023.4955844981541 1690.586397997816 1.1540731709157772 1.261464206476781 0.9464929899108114 1.1540092968080122 1.23653020590715 1.1091641638109642 1.1872115200774982 1.166534423741232 1.3217256539577078 1.1969193570317418 1.0 10.723308032202398 -6.497588655216295 24.732856239421874 1.1619043181408695 1.1206714989408355 0.04196931084737343 0.10147582386077561 2948.9869781647244 2884009.7479117243 0.01836472956518709 0.04248031690050816 3.179884492598174e-07 6.497588655216295 -0.041232819200033966 EGSFRLS(ph)GGGRPAER ddPTM_A549_PD325901_60min_R1 2 EGSFRLSGGGRPAER 15 2 Q9Y6R0;A0A0C4DGH3;M0QYC2;M0QXQ4 Q9Y6R0;M0QXQ4 NUMBL Numb-like protein 1 EGS(0.028)FRLS(0.972)GGGRPAER;EGS(0.007)FRLS(0.993)GGGRPAER 90.654 6.4713999999999996e-06 26783000.0 2596.2 2545.0 2637.6000000000004 2417.0 2697.7 2334.5 2294.8 2873.7 2860.7 3210.4 3006.2 True False 2859.7643127785755 2759.476081678276 2816.60339717728 2566.2926005947265 2508.2228585597672 2315.4886060010076 2382.129869762745 2816.381799125962 2740.4747273522244 3007.6947961097085 2636.4564578719064 1.0846999973164428 1.0466609730796268 1.068329191922549 0.9733870600943606 0.951361381702603 0.8782578597448267 0.9035346905313776 1.0682451404485882 1.0394538165687286 1.1408095844440602 1.0 11.364384454893582 -6.25009691567521 23.2949500702357 0.9970701104243482 1.0645731636505735 0.17358919228012548 0.0699267996835212 397.1421862703139 815636.7502563908 0.008824086315391562 0.023087788768021058 5.622158490192942e-07 6.25009691567521 0.0675030532262253 EGSGSSGTGEQKEDQKEEKQ ddPTM_A549_MK2206_60min_R1 2 EGSGSSGTGEQKEDQKEEKQ 20 3 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 43.534 0.030386 7374800.0 2256.6099999999997 2477.1 2017.02 1781.01 1255.29 995.73 723.49 1037.13 1504.65 3738.7 3497.3999999999996 False True 2637.470599182477 2603.173809450448 2303.0637657024326 2217.357529952578 1070.6385038726082 1101.0974876879193 854.9387679937515 1184.1463535774167 1163.849177432314 2894.125073360081 2628.899056670476 1.0032605065189748 0.9902144408493915 0.8760563703877179 0.8434548007183208 0.4072573654572273 0.4188435782248973 0.3252079100657973 0.4504343179601382 0.4427135284936879 1.1008886271295315 1.0 11.36024303170104 -3.8679055639248907 11.9669751206876 0.6944810894588725 0.9175843241300883 0.0 0.28829538227787793 0.0 0.0 0.040969110857143096 0.0 0.00013554841263982553 3.8679055639248907 0.22310323467121573 EGSGSSGTGEQKEDQKEEKQ ddPTM_A549_PD325901_60min_R1 2 EGSGSSGTGEQKEDQKEEKQ 20 3 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 55.007 0.0045916 19309700.0 4513.3 4565.6 4435.299999999999 5402.6 5288.3 4948.9 5935.1 5919.3 5140.8 5419.0 6668.9 False True 4971.486893484147 4950.359134974591 4736.306129625561 5736.306331805165 4916.868051644593 4908.597799202564 6160.9634783113415 5801.234917898985 4924.7500536135585 5076.843415187676 5848.6675776401935 0.8500204238808919 0.846408018451948 0.8098094252668322 0.980788573748901 0.8406817427001791 0.8392677022657993 1.053396076375596 0.9918900058668839 0.8420294004126979 0.8680341886067782 1.0 12.513892277208114 EGSHS(ph)PLDSADVR ddPTM_A549_MK2206_60min_R1 2 EGSHSPLDSADVR 13 0 A0A0A0MSK4;A0A0A0MRC4;Q86YR5-4;Q86YR5 A0A0A0MSK4 GPSM1 G-protein-signaling modulator 1 1 EGS(0.01)HS(0.99)PLDSADVR;EGS(0.001)HS(0.999)PLDSADVR 130.95 1.2499e-08 23015000.0 1431.33 1557.83 1891.14 1337.06 1720.54 1600.4299999999998 1589.72 1862.64 2805.5 2173.5 2543.1000000000004 True False 1672.9035113412835 1637.1168929700823 2159.3320888590606 1664.6397600229034 1467.4508451855565 1769.7864403205463 1878.5515463310148 2126.674924095764 2170.0587294629017 1682.5048404386919 1911.5780840106042 0.8751426506373376 0.8564216689152001 1.1296070544649968 0.8708196510238234 0.767664610438909 0.9258248224981892 0.9827228937411242 1.1125231775172237 1.1352184603989546 0.8801653746252922 1.0 10.900548417146473 -7.964926864123651 3.1199286557916235 1.0690102408726805 0.9047311687085617 0.21941191247434533 0.10494895671929577 0.20117254368568593 4.0420401607659775 0.015568427173558162 0.02159017509060187 1.0841094643951138e-08 7.964926864123651 -0.16427907216411874 EGSHS(ph)PLDSADVR ddPTM_A549_PD325901_60min_R1 1 EGSHSPLDSADVR 13 0 A0A0A0MSK4;A0A0A0MRC4;Q86YR5-4;Q86YR5 A0A0A0MSK4 GPSM1 G-protein-signaling modulator 1 1 EGS(0.006)HS(0.994)PLDSADVR 120.92 3.0098000000000004e-06 14895000.0 905.88 703.56 954.77 906.64 1042.1 1028.0 859.29 874.86 1099.7 760.87 880.73 True False 997.8442707263912 762.8514703440343 1019.5664336984183 962.6410936711642 968.9064910498327 1019.6283088323142 891.9907511715298 857.4102309856072 1053.483433309763 712.8285383491135 772.4057934074659 1.2918653371622242 0.9876304357826179 1.3199880715557608 1.2462893234195924 1.2544008593921914 1.3200681785855424 1.1548214148375495 1.110051527712065 1.3638989276120315 0.9228679334530525 1.0 9.593215174996581 -11.033450201205714 1.3183674808394212 0.9996112120743827 1.2379210478906575 0.46467579756578536 0.10728716531809038 0.35945162584162466 1.1103208918356362 0.07629018315478077 0.01700913013123289 9.25869544755716e-12 11.033450201205714 0.23830983581627474 EGSIETLSNSSGSTS(ph)GSIPR ddPTM_A549_MK2206_60min_R1 1 EGSIETLSNSSGSTSGSIPR 20 0 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 EGSIETLSNS(0.057)S(0.094)GS(0.222)T(0.034)S(0.371)GS(0.222)IPR 163.45 3.6599e-27 4111300.0 1158.8 1486.3 955.05 1337.4 1979.9 1552.7 1594.3 1314.8 2288.0 1867.5 1859.2 True False 1354.3771100600702 1561.9463214994146 1090.4904509792211 1665.063060038167 1688.6593327576697 1717.0056834011557 1883.9636730465359 1501.1769264061268 1769.771653185214 1445.630452964921 1397.509328690384 0.9691363644271818 1.117664325692284 0.7803099618670363 1.1914504081332389 1.208334927066372 1.228618405724829 1.3480866527109423 1.074180254533893 1.2663755560355934 1.0344334905582573 1.0 10.448642198077913 -6.304982974689593 24.994254986840247 1.1572498749668516 0.9718993334591811 0.3754792330219121 0.12130857229953743 436.3942916038258 250491.8889352686 0.018897876414132594 0.043914964522291655 4.954696139358281e-07 6.304982974689593 -0.1853505415076705 EGSIETLSNSSGSTSGS(ph)IPR ddPTM_A549_MK2206_60min_R1 1 EGSIETLSNSSGSTSGSIPR 20 0 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 EGSIETLSNS(0.003)S(0.006)GS(0.017)T(0.002)S(0.176)GS(0.796)IPR 174.65 1.4702e-34 6032700.0 795.08 1128.0 1449.8 1073.4 1552.6 1681.3 1526.3 1003.4 2177.4 1809.4 1329.9 True False 929.2700661603039 1185.4103819224522 1655.4034404792158 1336.3830481867574 1324.214596716783 1859.214050043384 1803.6089532527913 1145.6350227836238 1684.222376593306 1400.6552833171236 999.649126627227 0.9295962367272015 1.185826456850891 1.655984481339443 1.336852113996894 1.3246793914427013 1.85986662771996 1.8042420137334487 1.1460371366991005 1.6848135328000533 1.401146908458645 1.0 9.965277992559804 -3.942957552876155 16.19621887091873 1.3730791944003606 1.3306097203334968 0.0 0.3055541497476384 0.0 0.0 0.04518052305822272 0.0 0.00011403612388720168 3.942957552876155 -0.042469474066863855 EGSITQGT(ph)PLKYDTGASTTGSK ddPTM_A549_MK2206_60min_R1 4 EGSITQGTPLKYDTGASTTGSK 22 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EGS(0.001)IT(0.024)QGT(0.974)PLKY(0.001)DTGASTTGSK;EGSIT(0.008)QGT(0.992)PLKYDTGASTTGSK;EGSIT(0.019)QGT(0.971)PLKY(0.01)DTGASTTGSK;EGSIT(0.002)QGT(0.998)PLKYDTGASTTGSK 151.02 9.1449e-28 32394400.0 7002.099999999999 8278.599999999999 8617.300000000001 7764.0 10046.4 9907.5 7769.5 8168.900000000001 12132.599999999999 12540.9 12877.1 True False 8183.883295091137 8699.945379240438 9839.362717368986 9666.180348539205 8568.587868385606 10955.905073933762 9181.117579963031 9326.866591207043 9384.585471781 9707.90197996668 9679.360680119906 0.845498330473388 0.898814050509446 1.016530227825656 0.9986383055641503 0.8852431634234195 1.1318831311282476 0.9485252056801439 0.9635829162108983 0.9695460043198582 1.0029486761357487 1.0 13.240696045583425 -5.595084107756454 4.171454990809194 0.9867699575054278 0.8554616893080256 0.4043176018115271 0.05672744148361057 0.13568830278355176 4.454199172617204 0.0070278938326506675 0.03210545156105831 2.5404806550419187e-06 5.595084107756454 -0.13130826819740227 EGSITQGT(ph)PLKYDTGASTTGSK ddPTM_A549_PD325901_60min_R1 2 EGSITQGTPLKYDTGASTTGSK 22 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EGSIT(0.002)QGT(0.998)PLKYDTGASTTGSK;EGSIT(0.033)QGT(0.966)PLKYDTGASTTGSK 152.35 5.0755e-28 60605000.0 7260.2 7225.3 7765.4 8802.6 9066.3 8332.4 8697.2 7936.099999999999 8361.6 8900.9 8816.1 True False 7997.25015932324 7834.2013881925595 8292.406741143632 9346.316609844915 8429.514365037041 8264.543696998417 9028.176705290456 7777.808259749988 8010.191030247269 8338.895654962898 7731.775589862456 1.0343355244051393 1.013247383752886 1.0725100133553085 1.20881891891681 1.0902430194804706 1.0689063076060434 1.167671849804821 1.0059536996841822 1.0360092500291729 1.0785227219859395 1.0 12.916584049462799 -8.30341517269484 24.936482503375704 1.0166506811212024 1.093112518879871 0.21738770310825595 0.05591670566298571 435.3653538329491 258635.5994925085 0.008973367222476903 0.010848301428253323 4.972614903931728e-09 8.30341517269484 0.07646183775866855 EGSLS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 EGSLSPAR 8 0 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 EGS(0.02)LS(0.98)PAR 56.258 0.019156 14895000.0 961.58 636.85 686.0 941.01 1119.1 787.15 781.26 632.91 1232.7 950.75 1069.7 True False 1123.8711956261325 669.2629447937178 783.2851153046923 1171.557492243544 954.4818724628057 870.445690532118 923.2048292067585 722.6269307055837 953.4954182174012 735.9749146754482 804.0639677818973 1.3977385390449222 0.8323503746100654 0.9741577121848579 1.4570451346991953 1.187072062308492 1.0825577633249035 1.1481733620690961 0.8987182110635215 1.1858452267768294 0.9153188603957959 1.0 9.651166470197198 -7.284842010600526 18.00530884465089 1.0787592670309316 1.1560356103569063 0.08942864692680685 0.18327146438728495 69.93520541833423 53805.862518476584 0.02669699551398701 0.042745285531513084 5.1898880443389794e-08 7.284842010600526 0.07727634332597466 EGSLS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 EGSLSPAR 8 0 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 EGS(0.113)LS(0.887)PAR;EGS(0.039)LS(0.961)PAR 49.16 0.033963 37062000.0 1573.22 1512.9099999999999 1555.98 1586.08 1509.25 1560.3200000000002 1572.01 1601.6799999999998 1533.81 1566.94 1654.7 True False 1732.9321362566475 1640.408235258107 1661.5781596678432 1684.048559350966 1403.2454866298428 1547.6132712424474 1631.83370078688 1569.733235906348 1469.3492996679533 1468.0031409843473 1451.182390007533 1.1941518503733028 1.1303942540603678 1.1449823062276947 1.160466507137138 0.966967003108795 1.066449870050045 1.1244856001721528 1.0816925885506368 1.012518694952139 1.011591066080072 1.0 10.503013138748278 -2.0000000000000004 0.1683564727100217 0.9792751200223113 1.8309563938753344 0.5552931582896365 0.04793079140552931 27.733985458128622 0.2798257797841329 0.061949035669564195 5.994767546511221 0.00999999999999999 2.0000000000000004 0.8516812738530231 EGSLS(ph)PVNSQK ddPTM_A549_MK2206_60min_R1 1 EGSLSPVNSQK 11 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 EGS(0.015)LS(0.96)PVNS(0.025)QK 53.034 0.021586 9650800.0 4960.5 5737.3 4901.1 6041.1 6741.0 6308.6 5010.6 4827.1 7889.2 8217.5 7225.7 True False 5797.711127418862 6029.304064010357 5596.149677288375 7521.169771195282 5749.407829748706 6976.171864690237 5920.961161743064 5511.3562073737585 6102.308796463635 6361.161042698388 5431.359270825138 1.0674512287488702 1.1100911877432071 1.0303405461222972 1.3847674948692277 1.0585578200713004 1.2844246747150663 1.0901435288119956 1.0147287138559087 1.1235325251346457 1.1711913584630158 1.0 12.407097581747559 -10.519379204769473 0.40859826508068275 0.9700737365703612 1.1444036099050607 0.0 0.11622849336488061 2.529806727909472 0.6006417271446424 0.18588393505863937 0.03193944862997236 3.0242716283729976e-11 10.519379204769473 0.17432987333469951 EGSQGELT(ph)PANSQSR ddPTM_A549_MK2206_60min_R1 2 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGSQGELT(1)PANSQSR;EGSQGELT(1)PANSQSR 135.72 1.36e-09 81025000.0 1756.01 1978.63 1922.97 1433.52 2723.3 1891.88 1729.66 1988.6499999999999 2988.0 2373.7 2551.6000000000004 True False 2052.3815576774095 2079.3338155879615 2195.676061483184 1784.7324643531588 2322.706177533696 2092.077485871693 2043.9168329183155 2270.5472274852023 2311.222770855517 1837.479521393752 1917.9672994225382 1.0700816214621285 1.0841341331596255 1.1447932726195376 0.9305333124764464 1.2110249107130329 1.0907784958072935 1.0656682382091176 1.1838299996922883 1.2050376310124684 0.9580348538512521 1.0 10.905362407852797 -6.796075486339215 24.999976679344357 1.1093241587696434 1.0655387747739675 0.04857441069387658 0.08894302896857768 496.4157829782599 358306.15118772036 0.013477862738131098 0.025471621552134407 1.5992800276452078e-07 6.796075486339215 -0.043785383995675886 EGSQGELT(ph)PANSQSR ddPTM_A549_PD325901_60min_R1 2 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGSQGELT(1)PANSQSR;EGSQGELT(1)PANSQSR 136.63 1.1032e-09 103440000.0 2129.2 2477.4 2509.6 2449.9 2469.5 2567.3 2684.6 2261.31 2896.3 2503.5 2830.0 True False 2345.3548165658044 2686.1791924360564 2679.916547450749 2601.224758873406 2296.050839312505 2546.3927599856024 2786.7639220694878 2216.2063980866233 2774.5785831545604 2345.428582750017 2481.9279408480784 0.9449729695876639 1.0822953995667517 1.079772101092918 1.0480661892160188 0.9251077767100447 1.0259736868571199 1.1228222528963698 0.8929374465760446 1.1179126265069899 0.9450026909115583 1.0 11.277245514195519 EGSQGELTPANS(ph)QSR ddPTM_A549_PD325901_60min_R1 1 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGSQGELT(0.009)PANS(0.742)QS(0.249)R 56.513999999999996 0.0090837 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EGSQGEPWT(ph)PTANLK ddPTM_A549_MK2206_60min_R1 1 EGSQGEPWTPTANLK 15 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 EGS(0.002)QGEPWT(0.952)PT(0.046)ANLK 110.97 2.6274e-06 3087500.0 1780.9 1897.7 1593.4 1244.8 2715.9 1943.6 1879.6 2373.6 2756.3 3381.9 3295.8 True False 2081.4723811753356 1994.2848242679413 1819.3680797762327 1549.7760558811951 2316.394707730975 2149.2704619427373 2221.0989900635177 2710.0650688451346 2132.002450906645 2617.926441168443 2477.3619005474216 0.8401971390273636 0.8050034287793257 0.7343973762469697 0.6255751553855502 0.9350247564633662 0.867564186511391 0.8965581450060738 1.093931842677605 0.8605938641566812 1.0567396069948283 1.0 11.274588921913033 -6.794235865356697 23.601771715015307 0.9370766492377013 0.7539229406183331 0.5638191838881371 0.08640104421989246 62.208212142102965 44767.53969782879 0.012298331759471618 0.023243386586256205 1.6060687600780602e-07 6.794235865356697 -0.1831537086193682 EGSQGEPWT(ph)PTANLK ddPTM_A549_PD325901_60min_R1 1 EGSQGEPWTPTANLK 15 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 EGSQGEPWT(0.997)PT(0.003)ANLK 130.47 2.8334999999999998e-09 4616100.0 4005.6 3723.4 4093.6 4364.4 4400.7 4499.4 4539.6 4145.1 4988.1 4712.1 6111.2 True False 4412.245563233134 4037.1839852734365 4371.416312816539 4633.9790757284345 4091.610013590825 4462.758378171317 4712.356962164437 4062.422728731959 4778.467503585004 4414.577201827983 5359.561142088614 0.8232475470022695 0.7532676423018007 0.8156295257997568 0.864619126991166 0.7634225835133079 0.832672351309754 0.8792430643543396 0.757976748661335 0.8915781305412707 0.8236825898225741 1.0 12.387899157723234 -9.622159975047314 0.5102073691126734 1.0042342443427685 0.8024487873631695 0.06433731882065652 0.06625429027032285 0.3069652016431288 0.17492184208041767 0.02579102215733038 0.012100387422291225 2.386931879896821e-10 9.622159975047314 -0.20178545697959904 EGSQGEPWTPT(ph)ANLK ddPTM_A549_MK2206_60min_R1 1 EGSQGEPWTPTANLK 15 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 EGSQGEPWT(0.364)PT(0.636)ANLK 98.676 1.222e-05 2662000.0 1536.7 1871.5 1851.9 1726.5 2291.6 1652.9 1707.6 1534.4 3080.1 2809.8 3128.1 True False 1796.0573912921204 1966.7513561771898 2114.5272668116013 2149.4925775055294 1954.5086756641645 1827.808780893779 2017.848816467581 1751.905898902923 2382.462267908993 2175.064228509149 2351.306438831964 0.7638550899321871 0.8364504616226007 0.8992988884349821 0.914169477022022 0.8312437049400873 0.7773588124063328 0.8581819805120631 0.7450776597937615 1.0132504332750885 0.9250449846042333 1.0 11.199246858095092 -8.779079321222348 24.99738226860717 1.0062571758360794 0.8331203876846284 0.5835315074029188 0.05554138300455448 90.73607045869763 128580.64469716125 0.008730565842767211 0.009304255561903424 1.6631088659990736e-09 8.779079321222348 -0.17313678815145106 EGSRGEEDTGQEEGGSRR ddPTM_A549_MK2206_60min_R1 1 EGSRGEEDTGQEEGGSRR 18 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 0 54.974 0.0035989000000000004 3840400.0 246.98 228.26 225.88 238.63 0.0 200.42 154.56 0.0 156.11 408.17 557.11 False True 288.6641859187401 239.87745902271186 257.9131805321047 297.09436071250775 0.0 221.6283113719712 182.64155134295456 0.0 120.75133425644401 315.9641135136234 418.7642115462024 0.6893239153673276 0.572822252735048 0.6158911707851354 0.7094549928599361 0.0 0.5292436776143151 0.4361441267117538 0.0 0.28835160915636526 0.7545155598349478 1.0 8.709994341615955 -10.77697458318724 1.0711960303819303 0.9939035572614932 0.4182777155004908 0.32380961383838036 0.2431941246145978 0.3768483383763402 0.7804591465556565 0.15836520119959227 0.04177534796718109 1.67118841670498e-11 10.77697458318724 -0.5756258417610023 EGSS(ph)PEGSTRR ddPTM_A549_PD325901_60min_R1 1 EGSSPEGSTRR 11 1 Q9Y2I9;F8VZ81;Q9Y2I9-2 Q9Y2I9 TBC1D30 TBC1 domain family member 30 1 EGS(0.418)S(0.582)PEGSTRR 51.726000000000006 0.010062999999999999 10936000.0 571.83 571.11 538.32 478.42 656.3 617.15 702.66 659.31 540.68 714.1 582.39 True False 629.8817606410029 619.2394440107195 574.8536323811315 507.97091682934587 610.2037521120861 612.1241350154302 729.4001108103054 646.1595448313108 517.9570998653476 669.0116041309313 510.7597220743863 1.2332252004578932 1.212388951688979 1.1254874014858414 0.9945398880833555 1.1946982617067385 1.1984581175065354 1.4280689711552406 1.2650949495528252 1.0140915140327238 1.3098362600203184 1.0 8.996500950025473 -8.774867367531709 23.61222833657945 1.0066542659755702 1.203650882195682 0.0 0.13384279260326315 82.56177029611197 145178.68693663337 0.0183378385088772 0.019584754151984424 1.679316799044146e-09 8.774867367531709 0.19699661622011178 EGSTEFDWGDETS(ph)RDSEASSVAAR ddPTM_A549_MK2206_60min_R1 2 EGSTEFDWGDETSRDSEASSVAAR 24 1 I3L2J0 I3L2J0 CIC 1 EGSTEFDWGDET(0.229)S(0.747)RDS(0.023)EAS(0.001)S(0.001)VAAR;EGSTEFDWGDET(0.219)S(0.776)RDS(0.005)EASSVAAR 110.33 9.5852e-12 21838800.0 3370.2 3343.5 2233.6000000000004 2290.38 4081.3 3141.2 3111.5 2727.1 5148.1 5273.0 5215.3 True False 3939.0073665209216 3513.669868756844 2550.358066391486 2851.5232028190667 3480.946176465417 3473.599699040193 3676.8192740916365 3113.6747763934836 3982.063569826398 4081.8256377424523 3920.1970750424675 1.0047983025134648 0.8962992935039574 0.650568840691219 0.7273928193490569 0.887951832479674 0.8860778253099849 0.9379169474666794 0.7942648588297703 1.0157814756757504 1.0412297034067437 1.0 11.936710467584133 -8.770669007437288 24.939331475512674 1.007452379461275 0.8447339903432908 0.39738710216667517 0.09333310190355756 146.2463681866683 395170.4904127832 0.016735541096146164 0.01793751995666233 1.6956296127936298e-09 8.770669007437288 -0.1627183891179843 EGSTEFDWGDETS(ph)RDSEASSVAAR ddPTM_A549_PD325901_60min_R1 2 EGSTEFDWGDETSRDSEASSVAAR 24 1 I3L2J0 I3L2J0 CIC 1 EGSTEFDWGDET(0.287)S(0.713)RDS(0.001)EASSVAAR;EGSTEFDWGDET(0.247)S(0.743)RDS(0.01)EASSVAAR 145.33 2.6095e-28 22878000.0 8034.2 8267.1 8060.4 8216.0 7208.1 7454.1 7519.3 7497.1 8986.099999999999 8946.7 10907.2 True False 8849.826069534556 8963.79753038997 8607.427215122732 8723.483660110169 6701.827922595045 7393.39628099898 7805.451076218844 7347.564459138831 8608.445467004514 8381.803835146624 9565.683546437514 0.9251640017749113 0.93707861930351 0.8998235383114196 0.9119561208314276 0.7006115025717072 0.7729083076088644 0.8159846641723557 0.7681170324597699 0.8999299867295424 0.8762367889818188 1.0 13.223652349294172 -9.620396704859404 1.1032687588770964 0.9802062514446688 0.8431525525011698 0.12908064311635026 0.07913349862951119 0.3540432360470551 0.890354868785481 0.022558389146955505 0.01576194986671334 2.396642713486651e-10 9.620396704859404 -0.13705369894349895 EGSTQQLQT(ph)TSPKPLVQQPILPVVK ddPTM_A549_MK2206_60min_R1 1 EGSTQQLQTTSPKPLVQQPILPVVK 25 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGS(0.009)T(0.008)QQLQT(0.384)T(0.324)S(0.274)PKPLVQQPILPVVK 79.388 1.6256e-06 8154500.0 851.33 1290.0 1121.6 979.12 1344.5 1225.1 1106.7 912.41 1584.8 1479.0 1281.5 True False 995.0136909798399 1355.6554899645055 1280.6597453728018 1219.0044439543667 1146.72583104838 1354.739268844436 1307.773064643166 1041.7469116384345 1225.8453304055631 1144.8928727898897 963.2681823992722 1.0329560439767638 1.4073500139783397 1.329494494651513 1.2654881228591153 1.1904533462240583 1.4063988550624629 1.3576417123898081 1.0814713188633414 1.272589869367712 1.1885504926968868 1.0 9.911793702852323 -10.882256008545216 0.48116503895230567 0.9228612963184609 1.279701635460724 0.14081206094266618 0.12773799616728837 1.3510372146598315 0.37523662484442366 0.23378397836722126 0.027266950772842004 1.311426609449382e-11 10.882256008545216 0.3568403391422631 EGSTQQLQTT(ph)SPK ddPTM_A549_PD325901_60min_R1 1 EGSTQQLQTTSPK 13 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGSTQQLQT(0.21)T(0.718)S(0.072)PK 193.98 1.3484999999999998e-26 12792000.0 5758.9 5532.4 5708.2 5931.8 6781.6 7159.6 7022.3 6376.2 5863.2 7117.6 6916.3 True False 6343.53928852189 5998.634763959486 6095.5927781950795 6298.193813904761 6305.283811249925 7101.294591357818 7289.537469250005 6249.021688967865 5616.790093827233 6668.193521302785 6065.63894603801 1.0458155101146271 0.9889534832728067 1.0049382814281478 1.0383397148982387 1.0395085937926536 1.170741393369001 1.2017756965259907 1.0302330462728313 0.9260013897622511 1.0993390112114 1.0 12.566443909517837 -8.547182169240099 9.518405633765388 0.965677321370507 1.0694319698029897 0.044776376209978985 0.07474409500119449 0.2730928729687843 100.73083800809572 0.01210888924902202 0.013776080921234904 2.8367288840510967e-09 8.547182169240099 0.10375464843248272 EGSTQQLQTT(ph)SPKPLVQQPILPVVK ddPTM_A549_MK2206_60min_R1 1 EGSTQQLQTTSPKPLVQQPILPVVK 25 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGSTQQLQT(0.076)T(0.532)S(0.391)PKPLVQQPILPVVK 143.12 2.1695e-32 7531100.0 1204.4 1135.1 1267.9 891.66 1575.8 1067.1 1221.3 1078.8 1489.1 1661.6 1593.8 True False 1407.673275247107 1192.8717415958995 1447.7072852694162 1110.1167400281379 1344.001907449638 1180.0198137163477 1443.1944012367383 1231.7232036864384 1151.8212276040663 1286.2434059686816 1198.0154733577517 1.1750042520750876 0.9957064563219409 1.2084211910985072 0.9266297178255514 1.1218568852727095 0.9849787752816193 1.204654224700294 1.028136306315153 0.9614410274483234 1.0736450693442614 1.0 10.226430826505256 -8.519504036024193 23.456061265398027 0.9824756334255573 1.0829334973757108 0.10566751839637523 0.09107995021123834 63.71472573005489 442854.92762415134 0.012941156432089884 0.014836849875834512 3.023402473027404e-09 8.519504036024193 0.10045786395015344 EGSTQQLQTT(ph)SPKPLVQQPILPVVK ddPTM_A549_PD325901_60min_R1 2 EGSTQQLQTTSPKPLVQQPILPVVK 25 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGSTQQLQT(0.061)T(0.536)S(0.402)PKPLVQQPILPVVK;EGSTQQLQT(0.092)T(0.551)S(0.357)PKPLVQQPILPVVK 191.22 7.226699999999999e-58 30275000.0 3830.3 3880.3 3633.7 4199.5 4725.8 5150.4 4289.3 4241.9 4617.3 4745.3 4543.2 True False 4219.149236282171 4207.306498914035 3880.304733213174 4458.893577243509 4393.87611112494 5108.456850009679 4452.531658695021 4157.291976793825 4423.250938093271 4445.680948162034 3984.4152017176684 1.0589130456241884 1.0559407807450083 0.9738705774288753 1.1190835672249455 1.1027656227269573 1.282109567247771 1.1174868665232351 1.0433882430228731 1.1101380539323367 1.1157674898553533 1.0 11.960152278013775 -4.324559108212675 13.720765970039354 1.0726152358133723 1.0898166763014634 0.0 0.07896101069904161 0.0 0.0 0.011123326332107997 0.0 4.736318416939355e-05 4.324559108212675 0.017201440488091135 EGT(ph)GQQERESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_MK2206_60min_R1 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 2 EGT(0.895)GQQERES(0.105)PRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 84.62700000000001 8.0703e-09 90712000.0 484.47 509.63 403.27 676.36 804.49 401.65 552.61 588.19 649.43 919.0 677.39 True False 566.2366918457044 535.5679901942726 460.4597499255442 842.0682303629538 686.1505867014586 444.1523364063079 653.0120839002986 671.5677337563282 502.33514192660573 711.3972617267808 509.1753679870796 1.112066151361966 1.051834051422265 0.9043244800821324 1.6537882295679343 1.3475722311823806 0.8722973740111841 1.2824895408468953 1.318932092907859 0.9865660703747016 1.3971556883027236 1.0 8.992018818475042 -8.786466784588733 24.548080102708585 0.9936561423398571 1.1914072760714711 0.0 0.2403913453406232 250.55736160002866 245757.43333470004 0.036120026767204966 0.038461116258540755 1.6350581977421698e-09 8.786466784588733 0.19775113373161401 EGT(ph)GQQERESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_PD325901_60min_R1 2 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 2 EGT(0.985)GQQERES(0.015)PRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;EGT(0.845)GQQERES(0.155)PRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 164.2 2.0596999999999997e-55 290460000.0 1484.4499999999998 1770.19 1804.31 1654.98 2185.5 2110.42 2219.5 1876.08 1715.0 2363.8 1755.89 True False 1635.1502712056674 1919.3701237823445 1926.761326797442 1757.2043558677142 2031.9980195656929 2093.2334392275216 2303.964287057003 1838.6601126437122 1642.9245140731512 2214.5492645913687 1539.9266615037939 1.0618364575939507 1.2464035929529336 1.2512033040040298 1.141096131261044 1.3195420732448218 1.3593072264775283 1.4961519562282912 1.1939919988450582 1.0668849076674705 1.4380874881591967 1.0 10.588645929345764 -8.721410034611953 3.329464968508113 1.0293606466894196 1.2711261161365583 0.0 0.16296023115349376 0.1485783622977103 3.341758490448914 0.01954988607760955 0.021598097532779904 1.8992842437084318e-09 8.721410034611953 0.24176546944713873 EGT(ph)GQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_MK2206_60min_R1 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 EGT(0.937)GQQERES(0.063)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 228.87 1.3744999999999998e-140 70165000.0 521.9 792.45 472.25 595.12 1097.5 932.02 682.91 491.53 814.59 1082.3 908.02 True False 609.9839607700638 832.7823201723822 539.2221511700301 740.9244267159521 936.0592038494583 1030.645737775195 806.9859072697793 561.2058827474932 630.0866656329298 837.8076783100051 682.5335739228922 0.8937054294108256 1.220133854201382 0.7900302223534978 1.0855501546355528 1.371447851963408 1.5100293628802939 1.1823387714564602 0.8222392336276403 0.923158493158774 1.2274966541128052 1.0 9.414756203925501 -8.2409599214777 24.15489064471082 0.9520892624898466 1.159111493853053 0.10379983803852721 0.20898209182147984 672.4595369847482 793145.7594261991 0.03223869892779309 0.04159061078039918 5.741694465351118e-09 8.2409599214777 0.2070222313632063 EGT(ph)GQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_PD325901_60min_R1 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 EGT(0.5)GQQERES(0.5)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 121.25 7.459000000000001e-25 127800000.0 1301.6 1450.4 1369.3 1999.2 1408.6 1744.5 1690.3 2041.5 2224.0 1458.1 2556.7 True False 1433.737473812724 1572.630298179242 1462.2289322698077 2122.686043487372 1309.6647954061925 1730.293370387131 1754.6252914676509 2000.780680974231 2130.5330141683303 1366.0353171590973 2242.242108256638 0.6394213490743276 0.7013650722142468 0.6521280315294333 0.9466801268564964 0.584087146782052 0.7716799912086428 0.7825315941604035 0.8923125088083618 0.9501797358648472 0.6092273943696478 1.0 11.130726347606121 -8.31434860922276 1.0610624502280448 0.9839000422052624 0.7101700993730077 0.017927876524341135 0.142499414485866 0.19975362857257428 0.4390128939235196 0.016171745886229164 0.020836201018230156 4.848991142199618e-09 8.31434860922276 -0.2737299428322547 EGT(ph)LIVR ddPTM_A549_MK2206_60min_R1 2 EGTLIVR 7 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 EGT(1)LIVR;EGT(1)LIVR 94.302 0.012759 25012000.0 1480.44 1364.44 1126.42 1387.27 1819.0700000000002 1557.13 1590.54 1752.1999999999998 1954.96 2016.32 1852.04 True False 1730.3020787170608 1433.8841680055584 1286.1632938506 1727.1512122769166 1551.4872127074586 1721.9044630607602 1879.5205297167645 2000.5797158874466 1512.1646814296187 1560.8319116049433 1392.127354296331 1.2429193876386866 1.0299949667538384 0.9238833572814235 1.2406560412354857 1.1144721838266571 1.236887169659215 1.3501067441252834 1.4370665943121745 1.0862258232070743 1.1211847154557826 1.0 10.443075482204595 -8.982518138541918 19.52836576845989 1.0380384042744535 1.1921014511436223 0.14576005317856278 0.13635693714329683 12.384858458928363 13836.396692750242 0.025819291607740436 0.026267487337031055 1.0410746256753262e-09 8.982518138541918 0.15406304686916883 EGT(ph)LIVR ddPTM_A549_PD325901_60min_R1 1 EGTLIVR 7 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 EGT(1)LIVR 100.84 0.011779000000000001 15050000.0 2777.1 3347.3 4057.2 3123.4 3856.4 3670.0 3336.6 3185.0 3288.4 4227.2 4730.1 True False 3059.0291476070324 3629.3887183503703 4332.54598992556 3316.3253242439287 3585.53976785776 3640.1127367846216 3463.5761388575797 3121.4726764158377 3150.1999837190388 3960.2938705815336 4148.327686574382 0.7374126102687723 0.8749040559395773 1.0444078475158511 0.7994366826364417 0.8643337843010752 0.8774891984944816 0.8349331105320037 0.7524653094590742 0.7593903427432513 0.9546723812100477 1.0 12.018314145332855 -10.979553683899333 1.2821848627410675 0.9990163770862861 0.8351874732469221 0.29868457027114903 0.08142250131136886 0.41725577475117837 1.2321438489048526 0.058544258323639034 0.013821445734976543 1.048205215095297e-11 10.979553683899333 -0.163828903839364 EGT(ph)PPPPPPSR ddPTM_A549_MK2206_60min_R1 4 EGTPPPPPPSR 11 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EGT(1)PPPPPPSR;EGT(1)PPPPPPSR;EGT(1)PPPPPPSR;EGT(1)PPPPPPSR 149.49 1.2287e-11 211946800.0 16267.500000000002 19858.7 17216.800000000003 16630.5 21440.499999999996 15942.640000000001 16347.08 16492.67 23404.8 25842.3 26231.600000000002 True False 19013.056297809962 20869.42300663422 19658.401127081368 20704.973246571528 18286.63085205861 17629.67958293206 19317.132835969118 18830.55647918356 18103.650169785527 20004.506481743185 19717.56976467011 0.9642697616760818 1.0584176070231535 0.9969991921775898 1.0500773418674876 0.9274282312835809 0.8941101663817048 0.9796913649359318 0.9550140663340826 0.9181481483698667 1.014552336849707 1.0 14.26719412677661 -6.763748029568537 24.99995178400323 0.9543118026234948 1.0189077514094143 0.3506300999045484 0.04046726746134075 52.0869002736411 564049.202799032 0.005958020223679861 0.011654457005468178 1.7228678643377193e-07 6.763748029568537 0.06459594878591945 EGT(ph)PPPPPPSR ddPTM_A549_PD325901_60min_R1 4 EGTPPPPPPSR 11 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 EGT(1)PPPPPPSR;EGT(1)PPPPPPSR;EGT(1)PPPPPPSR;EGT(1)PPPPPPSR 124.38 5.3183e-06 304609400.0 22491.6 22735.2 23316.500000000004 22699.6 27902.2 23771.999999999996 22898.600000000002 24647.7 26469.0 26833.399999999998 27124.4 True False 24774.930674559204 24651.17509319135 24898.897903504716 24101.702737467967 25942.44572936439 23578.408713581473 23770.01875359473 24156.082287753397 25356.599978426966 25139.134544583314 23788.27075573841 1.0414767399005993 1.0362743616933476 1.0466880152479512 1.013175904417262 1.0905561818992804 0.991177919390954 0.9992327310239952 1.015461886061065 1.065928677153224 1.0567869687845652 1.0 14.537962781081522 EGT(ph)PPRTHQR ddPTM_A549_MK2206_60min_R1 1 EGTPPRTHQR 10 1 E7ETJ5;Q9NQX6 E7ETJ5 ZNF331 Zinc finger protein 331 1 EGT(0.996)PPRT(0.004)HQR 44.61600000000001 0.021695 12722000.0 764.57 878.34 774.27 823.41 615.45 633.19 800.85 547.16 1314.8 1219.0 1402.4 True False 893.6107240581867 923.0437543065306 884.073128610735 1025.1454869642796 524.9181202816854 700.1937455224949 946.3540786296921 624.7216056072231 1016.9998993041604 943.6270533677322 1054.1453757290194 0.8477110886533927 0.875632313681761 0.838663384544407 0.9724896684722596 0.4979561001428914 0.6642288261600153 0.8977453209195349 0.5926332553279778 0.9647624727289913 0.8951583672367243 1.0 10.04185812543292 -8.921692636387924 12.457453490022388 0.9844683577113126 0.7769113855492247 0.24991306280000447 0.1362196175030328 0.5600098684119748 87.19839431402755 0.022983397985405662 0.024455599722339086 1.1975878013103835e-09 8.921692636387924 -0.2075569721620879 EGT(ph)PPRTHQR ddPTM_A549_PD325901_60min_R1 2 EGTPPRTHQR 10 1 E7ETJ5;Q9NQX6 E7ETJ5 ZNF331 Zinc finger protein 331 1 EGT(0.999)PPRT(0.001)HQR;EGT(1)PPRTHQR 74.46 0.00063895 21150800.0 1896.09 2246.0 1853.45 2577.9300000000003 2403.99 2933.1499999999996 2335.24 2967.44 2365.12 2504.87 2466.88 True False 2088.5796609723166 2435.278302337686 1979.2362627002685 2737.1628811961796 2235.1420357152747 2909.2633988827843 2424.1088360923613 2908.252081288353 2265.7222313263505 2346.712080716212 2163.4693988407457 0.965384424707575 1.1256356589293954 0.9148436597997665 1.2651729128513842 1.0331285651245787 1.3447213075635174 1.1204729021779898 1.3442538557960122 1.0472633597407919 1.084698531892179 1.0 11.079130999388646 -8.977850667770019 24.992796310640184 1.0208513521398614 1.1417603745248868 0.08717808539006022 0.13384263154483053 207.6831623543273 234347.67977126164 0.02227730391044583 0.02287979098941453 1.0523236532842543e-09 8.977850667770019 0.12090902238502532 EGTAPS(ph)ENGETK ddPTM_A549_MK2206_60min_R1 2 EGTAPSENGETK 12 0 A0A087WZE9;Q15651 A0A087WZE9;Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGT(0.019)APS(0.981)ENGETK;EGT(0.001)APS(0.999)ENGETK 132.31 5.9111000000000006e-08 46596000.0 3561.7000000000003 3750.0 4085.4 3035.6 4917.7 3792.5 4119.0 4668.8 4941.1 4987.8 4012.2 True False 4162.827884795436 3940.858982454958 4664.771151699402 3779.322136273262 4194.3128444378 4193.819832742247 4867.368982800397 5330.616697600343 3821.9487393153263 3861.0525158224536 3015.860008913271 1.3803120411731118 1.3067115087596521 1.5467465790563324 1.2531490603355608 1.390751835974366 1.3905883629702824 1.6139240443571832 1.767527896469295 1.267283205460362 1.2802492504331253 1.0 11.558353747375447 -9.505551287391492 1.3544761491603183 1.0654775221088466 1.4437642088941767 0.32542693085774843 0.16075938573156676 0.21524382189405306 0.8102649508429507 0.03888626105553607 0.030385435330552883 3.122113682860085e-10 9.505551287391492 0.37828668678533006 EGTAPS(ph)ENGETK ddPTM_A549_PD325901_60min_R1 2 EGTAPSENGETK 12 0 A0A087WZE9;Q15651 A0A087WZE9;Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGTAPS(0.999)ENGET(0.001)K;EGTAPS(1)ENGETK 154.86 1.0026000000000001e-13 57927000.0 6326.4 6390.0 5428.1 5263.4 6496.2 5865.700000000001 5382.3 5880.200000000001 7324.099999999999 6148.4 6338.6 True False 6968.651470750472 6928.5077257069515 5796.483507816948 5588.508263951296 6039.929322673371 5817.931683966639 5587.126371807573 5762.914798072338 7016.2935472438285 5760.188974707492 5558.992383695984 1.2535817626210262 1.2463603558852914 1.0427219732873718 1.0053095737892859 1.0865151282430123 1.04658025814716 1.0050609869864373 1.0366833412066618 1.262152034570505 1.0361929963425744 1.0 12.440607690131843 -5.748870595384819 24.589535498654453 1.0927916634188601 1.2499712186737721 0.4368251782886009 0.07609952401776778 198.28709584584269 387919.21949709696 0.014423765408647208 0.05506396369626435 1.7829099333138128e-06 5.748870595384819 0.157179555254912 EGTAPS(ph)ENGETKAEEAQK ddPTM_A549_MK2206_60min_R1 2 EGTAPSENGETKAEEAQK 18 1 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGT(0.003)APS(0.997)ENGETKAEEAQK;EGT(0.007)APS(0.992)ENGETKAEEAQK 169.08 9.1607e-31 135162000.0 31791.0 34862.0 33376.0 28963.0 42102.0 31921.0 31357.0 33681.0 40038.0 45515.0 44143.0 True False 37156.54358467349 36636.32689235863 38109.21867115073 36058.93630019848 35908.85157218216 35298.8590325551 37054.161008417606 38455.38489373653 30969.456927547904 35233.12988845963 33181.074815178355 1.1198113319607295 1.1041332173965535 1.1485227312081538 1.0867320151939044 1.082208812469089 1.0638250638104099 1.1167257605370742 1.1589553716368914 0.9333470088009697 1.0618441411169293 1.0 15.018072998978038 -8.765340720542143 24.99999990247702 0.9685249713341088 1.1081630196517696 0.5704046698357064 0.040976085157124364 32.85588920904039 210541.95239271678 0.006069978433280277 0.006579907837754707 1.7165611512245605e-09 8.765340720542143 0.1396380483176608 EGTAPS(ph)ENGETKAEEAQK ddPTM_A549_PD325901_60min_R1 2 EGTAPSENGETKAEEAQK 18 1 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGT(0.002)APS(0.997)ENGETKAEEAQK;EGT(0.002)APS(0.998)ENGETKAEEAQK 170.59 7.9901e-31 145008000.0 47940.0 46502.0 49879.0 45506.0 56036.0 44007.0 49469.0 51583.0 52280.0 51844.0 56246.0 True False 52806.83350843725 50420.886738783214 53264.08888679306 48316.80226837553 52100.224673705416 43648.62158247434 51351.56986547549 50554.1365989193 50082.85340859731 48570.56099224762 49328.0985727707 1.0705223804751887 1.022153462177351 1.0797920541821784 0.979498575180163 1.0561977084286995 0.8848632492509766 1.0410206626902452 1.0248547594904738 1.0153007080683065 0.9846428789586217 1.0 15.59012205706017 -6.262153146301357 24.999732022115488 1.0043152498440782 1.0539557152984933 0.25108466830419895 0.044543396106894124 72.97403977791186 2556024.43290548 0.005628727992447411 0.013848092861553434 5.468231013539174e-07 6.262153146301357 0.04964046545441514 EGTAPS(ph)ENGETKAEEAQKTESVDNEGE ddPTM_A549_MK2206_60min_R1 2 EGTAPSENGETKAEEAQKTESVDNEGE 27 2 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGT(0.002)APS(0.998)ENGETKAEEAQKTESVDNEGE;EGT(0.001)APS(0.999)ENGETKAEEAQKTESVDNEGE 143.48 5.0831e-33 59925000.0 5795.1 6729.4 5480.6 5935.0 8642.4 5820.4 5311.3 4685.6 9218.1 9496.6 9576.6 True False 6773.171203407926 7071.897716408642 6257.831491164573 7389.075266432276 7371.114408518051 6436.310864731171 6276.294459419218 5349.79814904818 7130.215068280871 7351.3114643248555 7198.465919285886 0.940918701200137 0.9824173366525016 0.8693284876710748 1.026479162266465 1.023984067045398 0.8941225723507594 0.8718933353013427 0.7431858689106496 0.9905186949871971 1.0212330719840557 1.0 12.81347376809858 -8.95522346138371 24.999999337618767 0.9958176800204557 0.9205912237636 0.195333438859694 0.07626153928543404 175.85852727185286 98187.06378088563 0.01368154602283503 0.01455838824343142 1.108604248529372e-09 8.95522346138371 -0.07522645625685564 EGTAPS(ph)ENGETKAEEAQKTESVDNEGE ddPTM_A549_PD325901_60min_R1 1 EGTAPSENGETKAEEAQKTESVDNEGE 27 2 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGT(0.001)APS(0.999)ENGETKAEEAQKTESVDNEGE 190.23 2.3096e-58 43300000.0 7545.0 6984.5 6586.0 6587.4 8572.3 9021.6 8567.4 8813.7 8626.5 9006.3 9727.8 True False 8310.96284566457 7573.108327104882 7032.965564835287 6994.288736929134 7970.211220829551 8948.131080701947 8893.437095261163 8637.903839286111 8263.958204461833 8437.64068097523 8531.342269604924 0.9741682589941899 0.8876807526625683 0.824368000085053 0.8198345015236426 0.9342271085788523 1.048853837757974 1.042442890487033 1.0124905983506065 0.9686586170507172 0.9890167823926688 1.0 13.058557028943884 -7.001222085309193 7.264425640192164 0.9957704121038762 0.8737425267012876 0.6597691858128328 0.044419823664197326 0.06801823103717089 23.874093738910155 0.00685004387509904 0.012574132420822922 9.971900000461912e-08 7.001222085309193 -0.12202788540258858 EGTAPSENGETKAEEAQKT(ph)ESVDNEGE ddPTM_A549_PD325901_60min_R1 1 EGTAPSENGETKAEEAQKTESVDNEGE 27 2 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGTAPSENGET(0.001)KAEEAQKT(0.5)ES(0.5)VDNEGE 52.236999999999995 0.014191999999999998 9034000.0 947.54 999.15 1146.2 831.47 1032.5 1202.1 689.26 800.07 1397.8 1407.0 1294.1 True False 1043.7335632579197 1083.3518770172295 1223.988024660524 882.8280134946212 959.9807619316306 1192.3104961549843 715.4901664775443 784.1119762072274 1339.0553269804384 1318.1617798798786 1134.9339039757945 0.9196425973368227 0.954550633496922 1.0784663497783997 0.7778673369453327 0.8458472855280079 1.0505550076336547 0.6304245242574091 0.6908877895535586 1.179853137076604 1.1614436534693495 1.0 10.148392565276989 -8.776562483476633 24.999943476781844 1.0849306473739682 0.8727478355407987 0.38381399851260023 0.13698832058638055 211.33636602705738 349358.00197767525 0.025294645364332447 0.026978397023461925 1.6727749510614581e-09 8.776562483476633 -0.21218281183316945 EGTAPSENGETKAEEAQKTES(ph)VDNEGE ddPTM_A549_MK2206_60min_R1 1 EGTAPSENGETKAEEAQKTESVDNEGE 27 2 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGTAPSENGETKAEEAQKT(0.034)ES(0.966)VDNEGE 77.733 1.8703e-06 6297600.0 815.19 979.86 1002.1 876.39 950.5 728.07 626.66 692.69 1357.0 1539.2 1301.4 True False 952.774142518008 1029.7306886795513 1144.2128484647696 1091.1055893426415 810.6827091197363 805.1138841462486 740.5160103815726 790.8809287741558 1049.6416666837135 1191.4936509791742 978.226463187212 0.9739811570970219 1.0526506156095294 1.1696809394593033 1.1153916096152745 0.8287270275621124 0.8230342507020961 0.7569985460921368 0.8084844957039338 1.0730047756669963 1.2180141263988147 1.0 9.934024683066813 -6.702611425005502 24.99996024516835 0.9683514277644903 1.082674826805625 0.18013628275879578 0.13700743513254193 129.59503429461452 55072.544502822384 0.020165011082189994 0.04197680807026494 1.98330074489503e-07 6.702611425005502 0.11432339904113464 EGTAPSENGETKAEEAQKTES(ph)VDNEGE ddPTM_A549_PD325901_60min_R1 1 EGTAPSENGETKAEEAQKTESVDNEGE 27 2 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGTAPSENGETKAEEAQKT(0.032)ES(0.968)VDNEGE 98.883 3.75e-10 9273700.0 1029.7 970.76 1010.1 1139.5 1483.2 1375.0 1154.1 1532.2 1081.7 1273.2 1412.2 True False 1134.2343859749237 1052.5693520825168 1078.6514602247378 1209.8843270077332 1379.0251487622224 1363.8024558797963 1198.019907047753 1501.6390690123533 1036.2399107130777 1192.8099347143282 1238.508352673378 0.915806811901289 0.8498685937890501 0.8709278850614275 0.9768883063211817 1.1134564783398773 1.1011653275781024 0.9673087020057402 1.212457764835413 0.8366838289594943 0.9631020510597221 1.0 10.274387883016106 -6.262441534515863 22.72117865191427 0.9744379825736105 0.8759678428913797 0.18932503831565917 0.10186803121681874 42.66832961168788 967475.4552865925 0.016852881473025647 0.04138492506108059 5.464601103479023e-07 6.262441534515863 -0.09847013968223073 EGTGQQERES(ph)PR ddPTM_A549_PD325901_60min_R1 1 EGTGQQERESPR 12 1 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 EGTGQQERES(1)PR 59.673 0.0026495 3333900.0 537.8 611.99 412.99 562.96 687.26 584.15 585.13 504.68 664.35 731.42 535.03 True False 592.3970600925653 663.564545079092 441.0179849106174 597.7327606250757 638.9892285182883 579.3928760743153 607.3974423454216 494.61376148619894 636.4296798393577 685.2380163750819 469.2247018346104 1.2625018627032343 1.4141722345064889 0.9398865472902251 1.2738731748094563 1.3617979318222584 1.234787669551413 1.2944703038236753 1.0541085316956256 1.3563430854151466 1.460362196823582 1.0 8.874135154284017 -10.971057403836047 1.1737281295791757 0.9966349909156603 1.2509415029634219 0.0 0.1883225952020595 0.4579056471362157 1.0968360522420417 0.09630647266758133 0.02103079968938575 1.068913583861947e-11 10.971057403836047 0.25430651204776156 EGTGQQERES(ph)PRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_MK2206_60min_R1 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 2 EGT(0.3)GQQERES(0.7)PRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 77.335 2.2616000000000002e-08 59393000.0 1237.0 1029.9 1001.9 795.43 1402.4 1097.8 1310.3 1033.9 1740.4 1810.1 1905.5 True False 1445.7753582536302 1082.31751094143 1143.984485457392 990.31038570821 1196.108817748046 1213.9684673393367 1548.3645492020792 1180.4584911859563 1346.2021788477043 1401.197152830953 1432.3117608753898 1.009399907021647 0.755643806401441 0.7986979627663044 0.6914070056249202 0.8350897133016746 0.8475588209911733 1.081024810028622 0.8241630931414626 0.9398806988954292 0.9782766511493137 1.0 10.484129832372913 -7.571749677817546 10.037434053458876 0.9649975587646473 0.8099250020397973 0.3726028677735802 0.09188599480965247 0.3121407189672962 62.07864995561136 0.013430932047574713 0.01993367739937541 2.680713010754934e-08 7.571749677817546 -0.15507255672484999 EGTGQQERES(ph)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_MK2206_60min_R1 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 EGT(0.039)GQQERES(0.961)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 220.78 4.1721999999999985e-121 70814000.0 507.87 886.38 485.09 432.0 981.09 613.87 620.59 515.85 753.25 880.2 1212.9 True False 593.586039770631 931.4929559649136 553.8830562436635 537.8400193932168 836.7729606420642 678.8293159460727 733.3431699529256 588.9733172243696 582.6400776930778 681.3622086745507 911.7034556629549 0.6510735876711125 1.0217060713974904 0.6075254544701726 0.5899286835565636 0.917812645597132 0.7445724941916061 0.8043658992382202 0.6460141327380309 0.6390675324021942 0.7473506922040687 1.0 9.832420833666234 -10.904761376662533 1.1571284179063182 0.9999979341067893 0.7330967287005936 0.02161608645230484 0.1476211995860445 0.41742659830954726 0.9927630071187263 0.0886983845783354 0.021126121203066783 1.2451985988878152e-11 10.904761376662533 -0.26690120540619566 EGTGQQERES(ph)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_PD325901_60min_R1 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 EGT(0.002)GQQERES(0.998)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 334.3 0.0 129120000.0 3075.3 3644.1 3471.2 4073.2 4090.2 4411.2 3809.7 4115.0 4003.4 4405.0 4214.5 True False 3387.502192083795 3951.201095970062 3706.7765060212964 4324.792313091621 3802.9184624239742 4375.276649728697 3954.680218247833 4032.9230968449488 3835.1510201985166 4126.867548237998 3696.1432179166895 0.9164964646562428 1.0690064921773064 1.0028768604130551 1.1700824503032288 1.0288882865765867 1.1837411030286853 1.0699477766656635 1.0911165663970357 1.0376088787923585 1.1165334525549266 1.0 11.851804943952605 -9.297020470324515 1.4161399748578565 1.0106006115384916 1.0701646805581218 0.0 0.07687509116348672 0.5580301209592221 2.317110781954254 0.015170950474260071 0.013075042023132043 5.046375110833832e-10 9.297020470324515 0.059564069019630184 EGTGSTATSSS(ph)STAGAAGK ddPTM_A549_MK2206_60min_R1 2 EGTGSTATSSSSTAGAAGK 19 0 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RHC7;E5RH59;E5RFW7;E5RFH0 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EGTGSTATS(0.002)S(0.013)S(0.486)S(0.486)T(0.013)AGAAGK;EGTGSTATS(0.003)S(0.003)S(0.496)S(0.496)T(0.003)AGAAGK 164.41 5.1228000000000005e-27 6471200.0 2058.2 2083.19 2148.4 1858.46 2145.5 1543.9 1289.62 1585.98 1936.6599999999999 3054.9 3234.1 True False 2405.5738418412466 2189.215472976094 2453.0754252486895 2313.7827834294403 1829.8997921266637 1707.2744732421224 1523.9272608883348 1810.797521860048 1498.0096022105236 2364.7959682798064 2430.983713380791 0.989547494127714 0.9005471574844623 1.0090875606225989 0.9517886815504994 0.7527404573113349 0.7022977833396508 0.6268767875737824 0.744882621752227 0.6162154003603867 0.9727732667493125 1.0 11.247324512580981 -6.752770591032714 21.91371448562012 0.7816601382197484 0.9616108122960922 0.37502167223746363 0.11711433360299076 47.929046794037234 121153.32969045555 0.021860339417680064 0.04482574913581648 1.766970947755361e-07 6.752770591032714 0.1799506740763438 EGTGSTATSSSS(ph)TAGAAGK ddPTM_A549_PD325901_60min_R1 2 EGTGSTATSSSSTAGAAGK 19 0 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RHC7;E5RH59;E5RFW7;E5RFH0 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EGTGSTATSSS(0.003)S(0.964)T(0.033)AGAAGK;EGTGSTATSSS(0.013)S(0.968)T(0.019)AGAAGK 210.09 4.1908999999999985e-66 16582900.0 4284.6 4429.1 4191.4 3965.1000000000004 4986.0 5023.299999999999 3628.5 4538.4 5424.299999999999 4468.2 4005.2 True False 4719.569437844186 4802.3558009278 4475.853608935716 4210.0152216045335 4635.800560766208 4982.391910269805 3766.5845530913853 4447.878051694077 5196.335534511365 4186.077089452216 3512.585791054674 1.343616844850673 1.3671853405424912 1.2742332501412914 1.198551571986076 1.3197686367040398 1.4184399205161657 1.0723110486535468 1.2662688732105178 1.4793476497412852 1.1917366118466597 1.0 11.778317746669712 -11.018206277886243 1.3019030040513608 0.9998311635018114 1.3179971186983483 0.27368943180061545 0.1167145338076627 0.2906827977359773 0.8767574198333588 0.08132466629541389 0.01834606269289431 9.589450509116377e-12 11.018206277886243 0.3181659551965369 EGTLTQVPLAPPPPGAPPS(ph)PAPAR ddPTM_A549_MK2206_60min_R1 1 EGTLTQVPLAPPPPGAPPSPAPAR 24 0 P48634 P48634 PRRC2A Protein PRRC2A 1 EGT(0.001)LT(0.002)QVPLAPPPPGAPPS(0.998)PAPAR 40.492 0.028306 2213800.0 1323.7 1292.6 1225.1 1381.7 1765.1 1276.6 1448.5 1384.5 2333.9 1853.4 2236.6 True False 1547.1081986421423 1358.3878188590088 1398.8376016906386 1720.216562026869 1505.4561282138318 1411.6889646615032 1711.673700312304 1580.7571148534248 1805.275376472452 1434.7156527577963 1681.1904929802672 0.9202456265973551 0.8079916134018685 0.8320518153840508 1.0232133534001966 0.8954702840039804 0.8396960193124723 1.0181319175068608 0.9402605602719042 1.0738077475516876 0.8533926754572935 1.0 10.715267487943768 -8.050077972804303 1.5351874096687919 1.0322387965418016 0.8871823658640399 0.05460624665392466 0.08388399447486312 0.23862907533551986 1.1182116408822742 0.01144480548096459 0.016064051964280252 8.910909381800963e-09 8.050077972804303 -0.14505643067776175 EGTPGS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 EGTPGSPGR 9 0 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 EGT(0.06)PGS(0.94)PGR;EGT(0.31)PGS(0.69)PGR 77.66199999999999 0.0018948 188208000.0 1845.69 1475.3 1475.5500000000002 928.36 1736.23 1156.47 1303.16 1360.8600000000001 2055.63 2286.6 2235.8 True False 2157.197349211917 1550.386468484214 1684.8051776790637 1155.8082416756645 1480.832866969973 1278.8468877973428 1539.927303623736 1553.766072458962 1590.0330871665744 1770.0554718873302 1680.5891550591436 1.2835959001151596 0.9225255701650963 1.00250865751884 0.6877399144200648 0.8811391305912951 0.760951529377409 0.9163020593034485 0.9245365339777416 0.9461164749159753 1.0532350911338817 1.0 10.71475136414222 -5.260726138537269 24.105174571023166 0.9295372544186676 1.2835960710630259 0.5164828777202578 0.1024005823603336 23.13931916211956 781753.7664416115 0.014142657195350954 0.11715035618552738 5.486228115523649e-06 5.260726138537269 0.35405881664435823 EGTPGS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 EGTPGSPGR 9 0 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 EGT(0.049)PGS(0.951)PGR;EGT(0.002)PGS(0.998)PGR 102.52 0.00068876 208287000.0 2135.7 2784.0699999999997 2670.75 2279.41 3032.19 2385.12 2498.51 2562.2200000000003 2891.6 2942.08 2960.2 True False 2352.5146917807574 3018.6933495945136 2852.003155524423 2420.203978784291 2819.219434887622 2365.696373504015 2593.592165287133 2511.114512077295 2770.0761078098694 2756.316566701486 2596.114166253882 0.9061676571702424 1.1627737288419797 1.0985661542149288 0.9322409662270652 1.0859381577027 0.9112451232904162 0.9990285477428027 0.9672588920466316 1.0670085868400039 1.0617085344435262 1.0 11.342138113094167 -4.9433677272766685 15.490584930521754 1.0263719810130376 5.3911048746068725e-05 0.19146564925294096 0.07218531342997443 1483852.0685887984 10012629.952188002 0.009367177181102868 46774568.962145016 1.1392847200765315e-05 4.9433677272766685 -1.0263180699642915 EGTSQLAS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 EGTSQLASPLK 11 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 EGTSQLAS(1)PLK;EGTSQLAS(1)PLK 127.02 2.9808000000000003e-07 10672500.0 8892.2 9558.9 7930.1 6999.3 11181.0 9353.4 9048.8 7971.1 12951.3 11430.7 12697.5 True False 10392.985966582804 10045.407180636996 9054.707424020029 8714.128814210517 9536.289711381136 10343.170579715572 10692.8498304356 9101.027835469946 10017.851228976251 8848.496931034066 9544.36031682774 1.088913831999704 1.05249664170011 0.9486971492532191 0.9130133948156341 0.999154411068034 1.0836944788724543 1.1203317430905189 0.95355032012191 1.0496094967531449 0.9270916685147781 1.0 13.220432793064905 -7.0361723493167085 24.742493722530263 1.0304486312562793 0.9951702651658155 0.015746547465233518 0.06727692810970923 1183.8138606243417 809746.6142584663 0.009182709689972427 0.01590900481056813 9.200843647618414e-08 7.0361723493167085 -0.03527836609046375 EGTSQLAS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 EGTSQLASPLK 11 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 EGTSQLAS(1)PLK;EGTSQLAS(1)PLK 144.27 2.4549e-11 17576200.0 11627.0 11247.6 11144.0 12073.5 13647.9 11173.7 11452.1 11265.5 11431.0 12434.4 12644.5 True False 12807.364480654993 12195.474725455639 11900.29885431589 12819.252674092035 12689.318586698988 11082.705091828428 11887.91593232958 11040.80076488622 10950.594822373288 11649.289861932024 11089.306660089596 1.1549292370774347 1.0997508770631388 1.0731328133565874 1.1560012782610216 1.1442842168273544 0.9994046906210171 1.0720161590547566 0.9956258856671402 0.9874913876973452 1.0504975846558384 1.0 13.436881545831753 -7.543396403360828 1.3513491024038609 0.9954840307369389 1.1228163787953314 0.6148944110912078 0.03902726847888131 0.1567267845713465 0.5735291619143973 0.0056573808110693645 0.010010297762548827 2.861564877126452e-08 7.543396403360828 0.12733234805839244 EGTSQLAS(ph)PLKLK ddPTM_A549_MK2206_60min_R1 2 EGTSQLASPLKLK 13 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 EGTSQLAS(1)PLKLK;EGT(0.001)S(0.001)QLAS(0.998)PLKLK 74.786 0.00031232 8840500.0 2849.8 3272.5 3385.8 2808.9 3987.3999999999996 3144.8 2986.3 2560.2 5125.8 4935.4 5211.4 True False 3330.77656907938 3439.056272022361 3865.9573518930433 3497.080626096311 3400.858742076838 3477.5806486507086 3528.8720547066864 2923.116190283669 3964.814484220618 3820.489712215837 3917.265552676993 0.8502810249366892 0.8779226799347745 0.9869020366135539 0.8927351437041242 0.8681716101051021 0.887757187223161 0.9008508632495223 0.7462134366372125 1.0121382967032018 0.9752950523369494 1.0 11.935631217021278 -8.871814319201363 21.142229299034625 1.0057439863500715 0.8813780059916452 0.4882235363615952 0.0540296175227264 1.6735713067059952 312.2919645410974 0.00899154738597952 0.00957213579572637 1.3433391774529009e-09 8.871814319201363 -0.12436598035842628 EGTSQLAS(ph)PLKLK ddPTM_A549_PD325901_60min_R1 2 EGTSQLASPLKLK 13 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 EGTSQLAS(1)PLKLK;EGTSQLAS(1)PLKLK 74.77199999999999 0.00031262 15222800.0 6385.6 6269.200000000001 6911.8 7424.6 7766.700000000001 8822.2 7517.0 8555.8 8403.7 8753.0 8455.2 True False 7033.861411169737 6797.527485759318 7380.876312029841 7883.20067950998 7221.193785660426 8750.354928191091 7803.063548460233 8385.147857104741 8050.521713653956 8200.33408620368 7415.264001928864 0.9485652040628741 0.9166939280909135 0.9953625804974606 1.06310452027863 0.9738282795841179 1.180046310679558 1.0522974699795575 1.130795593376526 1.0856689271696662 1.1058721690921056 1.0 12.856282341805032 -6.012804319493346 2.715789242136143 1.0551394270509207 0.9319494348572837 0.46855888948277136 0.05667688243098912 0.20621116734108252 3.0169841664048938 0.00828364418552411 0.02931499044738286 9.709473494375042e-07 6.012804319493346 -0.12318999219363702 EGTT(ph)PKPK ddPTM_A549_PD325901_60min_R1 2 EGTTPKPK 8 1 P61927 P61927 RPL37 60S ribosomal protein L37 1 EGT(0.043)T(0.957)PKPK;EGT(0.176)T(0.824)PKPK 72.434 0.0022402 57913000.0 20326.0 20309.5 18717.5 17460.4 19803.0 17804.199999999997 14383.099999999999 17721.9 18952.8 22982.0 25090.0 True False 22389.480556789662 22021.05284119646 19987.782107471074 18538.88925255448 18412.105596641246 17659.208498163705 14930.45674123432 17368.4228019384 18156.279726137396 21530.912597867347 22004.089058614234 1.0175145400088514 1.00077093773512 0.9083667155785388 0.8425201880964399 0.8367583655744755 0.8025421298342919 0.678531008553126 0.7893270544248662 0.8251320778502992 0.9784959759303625 1.0 14.425484026772809 -5.818727199084638 3.1083467330254275 0.8716089259764457 1.014934740845201 0.32172401189703803 0.08583954630384412 0.30405399818483464 5.827270428667552 0.014948490047339797 0.06063840004002435 1.5180035979368247e-06 5.818727199084638 0.14332581486875529 EGVDES(ph)FIKEAVLAR ddPTM_A549_PD325901_60min_R1 2 EGVDESFIKEAVLAR 15 1 Q5T3Q7;Q9H583 Q5T3Q7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed 1 EGVDES(1)FIKEAVLAR;EGVDES(1)FIKEAVLAR 61.096000000000004 0.0014921 3555900.0 1556.6 1212.58 1558.41 1466.1100000000001 1736.25 1336.9099999999999 1487.51 2023.96 1542.33 1533.54 1933.65 True False 1714.6248860916442 1314.7683721498806 1664.1730740806186 1556.668284922606 1614.3017897373304 1326.0226482110977 1544.1180070467055 1983.5905300340953 1477.5112336970508 1436.7120226844263 1695.823308417275 1.0110869909506768 0.7752979721554624 0.9813363608227582 0.9179424986058581 0.9519280586159479 0.7819344395311354 0.9105417995981213 1.1696917480662508 0.8712648460269269 0.8472062009958577 1.0 10.727770144805163 -8.024982897199822 24.98720982462523 0.9588589457339648 0.8990649741584503 0.08489515409434123 0.10347961216023449 1618.9607150137495 1619237.5275118637 0.01589070905640816 0.020565329321777584 9.440980547515084e-09 8.024982897199822 -0.05979397157551447 EGVHGGLINK ddPTM_A549_MK2206_60min_R1 2 EGVHGGLINK 10 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ; 109.66 0.00022298 41181000.0 4737.2 5135.6 4682.0 4492.7 5249.8 4543.299999999999 4692.1 4573.6 6518.299999999999 6048.3 5797.6 False True 5536.723546579703 5396.980104078851 5345.978002706365 5593.411701684969 4477.561374368009 5024.068990401537 5544.593834473845 5221.921806062566 5041.91545758618 4681.984829273214 4357.895914380038 1.2705038521709087 1.2384371288607599 1.226733751273381 1.2835120001898201 1.027459458036412 1.152865761163153 1.2723098356199791 1.1982667573200738 1.1569609638791594 1.074368209168043 1.0 12.089416023658124 -14.999999999541789 0.14042819189980263 0.25773797154556893 1.2768584129657556 0.45783067857713267 0.07051784286685543 34.85468477290076 0.32842881618607705 7.125506195848324 0.16064810842347957 1.0000000010550704e-15 14.999999999541789 1.0191204414201867 EGVHGGLINK ddPTM_A549_PD325901_60min_R1 2 EGVHGGLINK 10 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ; 114.97 9.8669e-05 60103000.0 6185.5 6471.1 7015.799999999999 6574.6 7560.5 5709.8 6546.3 7454.1 6896.9 6781.6 7517.4 False True 6813.4474064755705 7016.442307327424 7491.934377432648 6980.698110000037 7029.476562309046 5663.301281878155 6795.423028772808 7305.422127871676 6607.047277615808 6353.408618644907 6592.807456724863 1.0334667668059452 1.064257124659456 1.1363799756946713 1.0588354287337047 1.0662341663169257 0.8590120853751639 1.0307328210899396 1.1080897138016559 1.0021599024367713 0.9636878765758945 1.0 12.686677232655478 -7.034134706392736 24.948601126214534 1.00192901893531 1.0752828664559042 0.28876305192771423 0.06020018844676622 619.9218788199342 453091.45461482485 0.008545898914047223 0.014807369781267952 9.244114020712746e-08 7.034134706392736 0.07335384752059415 EGVIEAGAFQGSPAPPLPS(ph)VMSPSR ddPTM_A549_MK2206_60min_R1 1 EGVIEAGAFQGSPAPPLPSVMSPSR 25 0 P53367 P53367 ARFIP1 Arfaptin-1 1 EGVIEAGAFQGS(0.009)PAPPLPS(0.469)VMS(0.469)PS(0.053)R 69.548 2.9399e-05 7087600.0 685.8 1004.5 884.55 1199.3 1439.8 1201.4 998.79 708.67 1380.6 1227.3 1402.2 True False 801.5462737997891 1055.6247594336014 1009.9924908786668 1493.128553838623 1228.0073272915267 1328.5313505752226 1180.2572144528308 809.1261427108534 1067.8963043651695 950.052077603131 1053.9950412487392 0.76048391352026 1.0015462294613182 0.9582516533304183 1.4166371713377444 1.1650978223167192 1.2604721071564262 1.1197938968047707 0.7676754738354622 1.013189116240965 0.9013819234647822 1.0 10.041652364177365 EGVIEAGAFQGSPAPPLPS(ph)VMSPSR ddPTM_A549_PD325901_60min_R1 1 EGVIEAGAFQGSPAPPLPSVMSPSR 25 0 P53367 P53367 ARFIP1 Arfaptin-1 1 EGVIEAGAFQGS(0.043)PAPPLPS(0.458)VMS(0.399)PS(0.1)R 41.431999999999995 0.024313 1351900.0 1062.9 1295.0 1175.6 1536.6 873.32 1027.7 890.07 1199.7 1348.9 1124.9 1272.9 True False 1170.8048255343763 1404.1341948028955 1255.3832854570855 1631.5122921282 811.9810159904423 1019.3307519328489 923.9421009149922 1175.7710423535568 1292.2104239261075 1053.8736220233654 1116.3413695779223 1.0487874564543336 1.25780001804805 1.1245514317289287 1.4614815293865342 0.7273590660690505 0.9130995049643711 0.8276519406105372 1.0532361107410222 1.1575405688088758 0.9440424324880343 1.0 10.124562545600805 -6.75184301005366 24.99991276264641 1.0229568692481215 1.2185865237543871 0.37047758970001676 0.15420915050767162 228.1810552198816 594439.918146266 0.02320827774850641 0.04782789189040768 1.7707489377647926e-07 6.75184301005366 0.19562965450626568 EGVKDT(ph)PQAAK ddPTM_A549_MK2206_60min_R1 2 EGVKDTPQAAK 11 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 EGVKDT(1)PQAAK;EGVKDT(1)PQAAK 50.806000000000004 0.010216 23327000.0 7175.200000000001 8181.2 8740.6 7468.0 10901.7 8375.1 7422.700000000001 7158.6 12800.2 12352.1 13891.400000000001 True False 8386.198343202457 8597.588135269467 9980.148511417194 9297.660335251261 9298.074371394665 9261.347523058555 8771.308509014942 8173.353472293049 9900.975137719139 9561.752031093973 10441.781996864025 0.8031386161596823 0.8233832249946968 0.9557897794087759 0.8904285052152614 0.8904681570815356 0.8869508600964865 0.8400202677712697 0.7827546557424535 0.9482074171528091 0.9157203276189494 1.0 13.350080323128973 -8.94350263856951 6.815318655626872 0.9774813710618139 0.8633139810634118 0.4115571882243828 0.0497208636081548 0.1195989476146831 11.011449128328895 0.008699525646091008 0.009166320543314573 1.138930862245129e-09 8.94350263856951 -0.11416738999840204 EGVKDT(ph)PQAAK ddPTM_A549_PD325901_60min_R1 2 EGVKDTPQAAK 11 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 EGVKDT(1)PQAAK;EGVKDT(1)PQAAK 74.678 0.00054929 34579000.0 9972.1 9799.0 10514.3 10091.900000000001 11780.0 10944.0 11407.599999999999 11947.099999999999 11954.0 10737.7 12248.1 True False 10984.460250927987 10624.796119593486 11227.86362562218 10715.253742632161 10952.613438793811 10854.875692471633 11841.722460478237 11708.805718181351 11451.614951154776 10059.719789492661 10741.661347102956 1.0226034778028554 0.989120376845525 1.0452632291047188 0.9975415716789549 1.0196386838938791 1.0105397425696363 1.102410705181277 1.0900367587309234 1.0660934636748063 0.9365143309238458 1.0 13.390929522953458 EGVKFDESEK ddPTM_A549_PD325901_60min_R1 1 EGVKFDESEK 10 1 P14625 P14625 HSP90B1 Endoplasmin 0 61.931999999999995 0.007355899999999999 15474000.0 7282.1 6909.8 8737.0 7534.0 9429.1 8302.5 9124.3 8603.0 8837.5 9748.4 9407.8 False True 8021.373431201314 7492.11309594521 9329.945359849055 7999.358069044547 8766.832544629093 8234.887192685106 9471.530229508535 8431.40641607706 8466.090608234092 9132.884360327647 8250.7002409578 0.9722051700996152 0.9080578468665191 1.1308064876158885 0.969536867832678 1.0625561817297797 0.9980834295501132 1.1479668334683084 1.021901919817933 1.0261057075140192 1.106922333087626 1.0 13.010300851449207 -5.72219049672624 24.999999332090507 1.0277084878325582 0.9401314387232603 0.27683092062245207 0.06007842543271363 147.29290106656342 93817.81957724023 0.007004249427405465 0.02712641616732196 1.8958741421941392e-06 5.72219049672624 -0.08757704910929787 EGVNQPAAVVMEDS(ph)SPHEALR ddPTM_A549_MK2206_60min_R1 1 EGVNQPAAVVMEDSSPHEALR 21 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EGVNQPAAVVMEDS(0.5)S(0.5)PHEALR 53.262 0.0028326000000000002 4102900.0 521.05 737.16 477.53 704.64 785.44 782.0 560.54 413.74 1002.3 1152.6 698.19 True False 608.990501550569 774.6782953350662 545.2509345647953 877.2768316324915 669.9028164660762 864.750720950412 662.3828622527158 472.3889120256092 775.2806503442047 892.2268594845347 524.8101539362837 1.1604015223083994 1.4761114843618643 1.0389489046185516 1.6716079615696617 1.2764669498894794 1.6477400722231452 1.2621380460812017 0.9001138954391519 1.4772592422789332 1.700094506160905 1.0 9.035651823015415 -10.983486307201971 1.1040158319489777 0.9888245187861556 1.338864274437742 0.0 0.3074800329826531 0.6380954925653511 1.3067648897755275 0.18141972602817444 0.03640323211564158 1.0387563526815089e-11 10.983486307201971 0.3500397556515863 EGVNQPAAVVMEDS(ph)SPHEALR ddPTM_A549_PD325901_60min_R1 2 EGVNQPAAVVMEDSSPHEALR 21 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EGVNQPAAVVMEDS(0.742)S(0.258)PHEALR;EGVNQPAAVVMEDS(0.789)S(0.211)PHEALR 99.87299999999999 3.0369e-08 12207600.0 4181.0 4528.2 4275.6 5021.0 5048.7 4469.6 3796.3 4400.0 4689.0 4835.3 4748.700000000001 True False 4605.452042110476 4909.8073057192805 4565.767927271448 5331.135766481642 4694.0967290694625 4433.201059491156 3940.770273915072 4312.238548266774 4491.937636436735 4529.998332802539 4164.640004489496 1.105846372590616 1.1789271822838208 1.0963175502203153 1.28009522089176 1.1271314504997334 1.0644860191306211 0.9462451183456212 1.035440888916729 1.0785896575921115 1.0877286699256563 1.0 12.023976077687664 -7.253367957096761 3.461442511155927 1.0311706679248183 1.164618959155584 0.5358648704979088 0.057453661225574895 0.13951742489209812 3.5739382653981284 0.008439666798231066 0.014587404701609461 5.5799722984236423e-08 7.253367957096761 0.13344829123076574 EGVQGPLNVS(ph)LSEEGK ddPTM_A549_MK2206_60min_R1 2 EGVQGPLNVSLSEEGK 16 0 P12270 P12270 TPR Nucleoprotein TPR 1 EGVQGPLNVS(0.972)LS(0.028)EEGK;EGVQGPLNVS(0.948)LS(0.052)EEGK 208.49 4.4751999999999995e-46 20218600.0 7829.1 9614.5 9514.3 8498.4 11947.7 9509.599999999999 9601.400000000001 11724.7 12347.900000000001 12878.6 13347.8 True False 9150.460676882367 10103.836983150186 10863.570805456902 10580.508381507678 10190.209157022486 10515.8995600384 11345.850097465343 13386.712130387838 9551.120365544453 9969.315315423843 10033.172879460788 0.9120206326370147 1.0070430465554976 1.0827652364782876 1.0545525835767624 1.0156517065387334 1.0481130631732478 1.1308337087155926 1.33424513772629 0.9519541305918132 0.9936353569499764 1.0 13.292490293933815 EGVSSTT(ph)PAK ddPTM_A549_MK2206_60min_R1 1 EGVSSTTPAK 10 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EGVS(0.026)S(0.271)T(0.229)T(0.473)PAK 45.158 0.051924 2767900.0 1594.0 1977.8 1696.1 1634.4 2347.8 2063.5 1619.8 1665.5 2739.2 2888.9 2802.1 True False 1863.0282304416216 2078.461572133179 1936.6324840645593 2034.8280733710035 2002.4417301118544 2281.8582003595575 1914.096692969188 1901.5897253798328 2118.775573603558 2236.2954835718133 2106.2612359742498 0.8845190703896134 0.9868014169532906 0.9194645236723313 0.9660853262723582 0.9507091028932251 1.083369033900529 0.908765095362838 0.9028271008844037 1.005941493588529 1.061736998894829 1.0 11.040468667118526 -2.0000000000000457 0.17662992886801474 1.0088715293395027 0.6354647942562233 0.2276200712628409 0.05446848435026372 65.57444615928301 0.6810401250610737 0.056686913479783885 6.608888913173244 0.009999999999998947 2.0000000000000457 -0.3734067350832795 EGVSSTT(ph)PAK ddPTM_A549_PD325901_60min_R1 2 EGVSSTTPAK 10 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EGVS(0.004)S(0.024)T(0.292)T(0.68)PAK;EGVS(0.006)S(0.039)T(0.26)T(0.695)PAK 65.627 0.014169 4666100.0 2814.0 2716.5 2601.8 2752.4 3216.2 2664.0 2838.7 2624.5 2989.7 3251.5 3422.1 True False 3099.675208442691 2945.428988557579 2778.3737938943905 2922.4094968460613 2990.305207287661 2642.3052672463837 2946.728281896243 2572.152288619578 2864.053305961809 3046.1997350955385 3001.203394479227 1.032810776552034 0.9814159859927367 0.925753249181733 0.9737458988024242 0.9963687275538827 0.8804152601276396 0.9818489101127927 0.8570403103472104 0.9543016348809588 1.0149927661347722 1.0 11.551325379760591 -3.986364491707577 16.539582479738392 0.9656208106786438 0.9653251563133437 0.0 0.05259239270864983 0.0 0.0 0.006538079773343728 0.0 0.0001031895000446291 3.986364491707577 -0.00029565436530010203 EGVSSTT(ph)PAKDAASAGLGSIGVK ddPTM_A549_PD325901_60min_R1 1 EGVSSTTPAKDAASAGLGSIGVK 23 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EGVS(0.036)S(0.036)T(0.18)T(0.747)PAKDAASAGLGSIGVK 74.13 4.7548e-05 25084000.0 2879.1 2570.2 2682.2 2826.2 3231.2 3121.7 3351.2 2761.6 3390.3 3091.6 2941.9 True False 3171.384112518603 2786.7997741176846 2864.2302213788635 3000.767955234101 3004.251659034851 3096.2779101963356 3478.731749847003 2706.517721566709 3247.817481085833 2896.395848384243 2580.0649502406227 1.229187704062579 1.0801277595193026 1.110138805269898 1.163059075297404 1.1644093140967895 1.2000775057649498 1.3483116963867783 1.049011468224586 1.2588122949319296 1.122605788708582 1.0 11.333191668996896 -10.964714922696615 1.192226629108059 0.9985858415305839 1.1823077381453975 0.16602611575587867 0.08695155469922326 0.38363833788560914 0.9571428962205448 0.058435753446951656 0.013100757480732294 1.0846386532070343e-11 10.964714922696615 0.18372189661481353 EGVT(ph)PWASFK ddPTM_A549_MK2206_60min_R1 1 EGVTPWASFK 10 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EGVT(0.998)PWAS(0.002)FK 97.163 0.00055231 5029600.0 2070.4 1983.6 1649.4 1149.5 2955.8 2135.4 1459.0 1720.9 3176.8 2924.2 2710.3 True False 2419.832903579884 2084.556767359377 1883.3097218419223 1431.1275516030157 2521.0057355245826 2361.3666106362007 1724.0814143981027 1964.842845035218 2457.259872307162 2263.6211890548993 2037.2577095253591 1.1877892974785489 1.023217022379087 0.9244337194240861 0.7024774258610808 1.2374505806199292 1.1590907716757899 0.8462755626531803 0.9644547353280051 1.2061605465121323 1.1111118531892945 1.0 10.992412774900815 -8.727603936339627 24.979037544445756 1.0973536939252986 1.000950405206248 0.07683438515851138 0.15316315219566792 402.36944154048894 297049.16664836364 0.02756078560065421 0.031250152669805305 1.872388925031766e-09 8.727603936339627 -0.09640328871905068 EGVT(ph)PWASFK ddPTM_A549_PD325901_60min_R1 2 EGVTPWASFK 10 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EGVT(0.997)PWAS(0.003)FK;EGVT(0.999)PWAS(0.001)FK 105.03 4.4963e-06 4570700.0 2918.2 2655.4 2525.2 2527.0 3009.8 2267.5 2266.3 2322.4 3166.0 3002.2 3205.3 True False 3214.453515734703 2879.1798771271115 2696.575257261169 2683.0870507666036 2798.4020312463163 2249.0342317872282 2352.5452866669443 2276.077910112445 3032.944030061571 2812.6405796413424 2811.0684200707938 1.143498853597363 1.0242297400411913 0.9592705883669878 0.9544723392748417 0.9954941015543981 0.8000638532058885 0.8368865267988382 0.8096842801340013 1.0789292812677926 1.0005592747438388 1.0 11.456902853320063 -5.312564869541153 2.844955589851594 0.9815017853463741 1.163060877488969 0.20504872838382937 0.0929848184948812 0.5402218800717662 6.42378223084676 0.015468121175826893 0.21228068437535796 4.8689479340864885e-06 5.312564869541153 0.1815590921425949 EGVT(ph)PWASFKK ddPTM_A549_MK2206_60min_R1 1 EGVTPWASFKK 11 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EGVT(0.927)PWAS(0.073)FKK 86.803 0.00019106 397000000.0 13893.0 15802.0 10969.0 9874.7 24587.0 15924.0 14051.0 15148.0 21109.0 22023.0 21598.0 True False 16237.798748761257 16606.25430420088 12524.569139616857 12294.001943292136 20970.284870201955 17609.06711050428 16603.884820910032 17295.275388804395 16327.845204146277 17047.989004362236 16234.620525524357 1.0001957682492117 1.0228914361190171 0.7714728607253559 0.7572706688131878 1.2917015730199608 1.0846614543788684 1.022745483628959 1.0653329014751196 1.0057423380161767 1.050100861770011 1.0 13.986786042440007 -6.711595775055117 24.999976119559395 1.0321060525438162 0.88927581691222 0.36021715650373953 0.11072209146165989 118.22820097081984 59298.844331191896 0.016172534479078914 0.03366577463316729 1.9426932220325274e-07 6.711595775055117 -0.14283023563159614 EGVT(ph)PWASFKK ddPTM_A549_PD325901_60min_R1 2 EGVTPWASFKK 11 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EGVT(0.984)PWAS(0.016)FKK;EGVT(0.959)PWAS(0.041)FKK 61.211999999999996 0.0048832 7193900.0 4589.7 6500.9 3957.6000000000004 7107.6 4755.7 5519.0 5071.4 4682.1 10122.3 6601.5 6347.6 True False 5055.642965241442 7048.753657910533 4226.186534982101 7546.620309469212 4421.67603827434 5474.055093818619 5264.394902176564 4588.711842463604 9696.894932246443 6184.680163380958 5566.885440751687 0.9081636435756771 1.2661934097495549 0.7591653501695638 1.355627017977615 0.7942818449084679 0.9833245451301161 0.9456625177948195 0.8242870975703063 1.7418887159526473 1.1109767264306865 1.0 12.442654679387303 -8.735696073083988 24.996248919571922 1.3503365022950016 0.9871456994902702 0.21987369337182638 0.24691859128161556 239.66284858359103 232707.87130504884 0.0507100928107208 0.05749005603602335 1.8378240350010392e-09 8.735696073083988 -0.36319080280473137 EGVTPWAS(ph)FK ddPTM_A549_MK2206_60min_R1 3 EGVTPWASFK 10 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EGVTPWAS(1)FK;EGVT(0.001)PWAS(0.999)FK;EGVT(0.01)PWAS(0.99)FK 136.53 5.1988e-07 59412000.0 10381.8 11523.0 7784.0 6888.3 16981.0 13130.9 11119.1 12496.3 17149.1 14371.2 16397.4 True False 12133.994029359365 12109.471481287606 8887.888247130795 8575.933809227536 14483.117394594676 14520.403122414018 13139.296542038348 14267.688793313735 13264.856231485388 11124.735938768126 12325.47303478254 0.9844647743025504 0.9824751915901826 0.7210991596062183 0.6957894260955512 1.1750557040466725 1.1780807991253053 1.0660277706956311 1.157577380847798 1.0762147784553098 0.9025808508423223 1.0 13.589355395875891 -6.768352952085221 24.99998806419436 1.0673803241580588 0.8467899953796356 0.4962800667485002 0.11270526481640508 106.41475226460142 384805.0257579044 0.01601478079295761 0.030740826556220128 1.7046964153434024e-07 6.768352952085221 -0.22059032877842322 EGVTPWAS(ph)FK ddPTM_A549_PD325901_60min_R1 2 EGVTPWASFK 10 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EGVTPWAS(1)FK;EGVTPWAS(1)FK 123.67 2.7181e-05 72700000.0 7876.700000000001 7767.5 7125.9 6700.4 7165.1 6369.6 7253.1 6433.700000000001 9149.8 9260.599999999999 10938.7 True False 8676.336785479934 8422.094485043626 7609.506425517728 7114.268490287507 6661.848094253099 6317.728089434149 7529.120689548611 6305.374806359986 8765.265725286594 8675.884135576112 9593.309246132469 0.9044154173365974 0.8779133736816609 0.7932097496581267 0.741586485722392 0.6944264928120414 0.6585556586723329 0.7848303954742173 0.657267960886593 0.9136853092503299 0.904368233419952 1.0 13.227812848544218 -8.931048297741388 5.34273713091162 0.9629531583264972 0.7629898439633469 0.5014236806005652 0.0780669480456709 0.11296406880389685 5.76481154236549 0.014818674632535564 0.015565694460285197 1.172065013349189e-09 8.931048297741388 -0.1999633143631503 EGVTPWAS(ph)FKK ddPTM_A549_MK2206_60min_R1 2 EGVTPWASFKK 11 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EGVT(0.002)PWAS(0.998)FKK;EGVTPWAS(1)FKK 117.79 1.3494000000000002e-05 407538900.0 11515.3 12226.8 10477.7 8283.0 18643.4 12626.5 12460.199999999999 14427.1 17765.1 16880.9 19060.9 True False 13458.801117945051 12849.091895114743 11963.59541199413 10312.335371838006 15900.980556762634 13962.627849207636 14724.057052558754 16472.185606140738 13741.333215035242 13067.492965705771 14327.552475922188 0.93936498509169 0.8968099692329143 0.8350062184102451 0.7197555471646776 1.1098183436064626 0.9745298698205561 1.0276742714642226 1.149685937903397 0.9590844799296947 0.9120534011420318 1.0 13.806504559810431 -6.767057761438068 24.999999869996557 1.0038564563381385 0.850330454455237 0.5044056181891783 0.08075828763525118 91.70842368974988 408075.3189205256 0.011236056107529363 0.02166008062675147 1.7097878971061955e-07 6.767057761438068 -0.15352600188290144 EGVTPWAS(ph)FKK ddPTM_A549_PD325901_60min_R1 2 EGVTPWASFKK 11 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EGVT(0.001)PWAS(0.999)FKK;EGVT(0.002)PWAS(0.998)FKK 103.76 8.6247e-05 1134460000.0 29244.0 24976.0 26142.0 25684.0 24631.0 26869.0 25044.0 20690.9 32995.0 30448.0 40137.0 True False 32212.82935170506 27080.815173279618 27916.153324616465 27270.4423474038 22901.00353233704 26650.187772388552 25997.063124602657 20278.203767802952 31608.334893203293 28525.50808371181 35200.40344940614 0.9151267086470998 0.7693325223446122 0.793063447830665 0.774719596228488 0.6505892344459306 0.7570989295816768 0.7385444647521859 0.5760787315108191 0.8979537674513941 0.8103744641652129 1.0 15.103304343955257 -8.95385005992245 7.957634176207929 0.9553888158772209 0.7459942368093324 0.3394179163676768 0.09215545197479451 0.12436094009030178 18.273011967656604 0.01475278006818883 0.015536398099483028 1.1121156186894907e-09 8.95385005992245 -0.2093945790678885 EGVTPWASFKK ddPTM_A549_MK2206_60min_R1 2 EGVTPWASFKK 11 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 0 ; 96.015 0.00028601 5968400.0 3104.4 3255.0 2632.5 2438.7 4666.3 3885.1000000000004 3089.0 3299.2 4802.1 4510.9 4343.5 False True 3628.346824707007 3420.665596770906 3005.8280846058324 3036.181609477402 3979.8934514102325 4296.218703279337 3650.2313153363507 3766.8717033762505 3714.4320173779347 3491.884557043891 3264.8890754984286 1.111323153958329 1.0477126535297976 0.9206524372185456 0.9299493916233246 1.2189980606929651 1.315885043544232 1.118026135322559 1.153751817066308 1.137690111818233 1.069526246159162 1.0 11.672818261748706 -4.874573220120834 14.708611729565868 1.0819642373812182 3.166402139543703 0.0 0.11290886259187276 5195173.476993165 5128675.601059454 3.3776460811502735 358543451.2254348 1.3348325237551897e-05 4.874573220120834 2.0844379021624846 EGVTPWASFKK ddPTM_A549_PD325901_60min_R1 1 EGVTPWASFKK 11 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 0 80.763 0.00085419 1645500.0 1729.4 1506.5 1560.2 1500.7 1506.6 1454.5 1381.5 1679.5 2018.8 1872.2 2230.0 False True 1904.9674148830081 1633.458042062209 1666.0845542447641 1593.3948306630148 1400.7816134878394 1442.6550342379387 1434.0737384858078 1646.0010549577373 1933.9568565661093 1753.9889724883494 1955.724137134705 0.9740470952482799 0.8352190429348374 0.8519016167002539 0.8147339394181983 0.716247034482122 0.7376577334426857 0.7332699490976485 0.841632530735783 0.988869963736048 0.896848864921249 1.0 10.933487171283941 -8.71576607677054 4.037571437079487 0.9954846612509404 0.8045846740586055 0.4348002667039299 0.07341317623000122 0.10663506738234727 3.627786121711432 0.012139322194558162 0.01350899527658674 1.9241278392472288e-09 8.71576607677054 -0.19089998719233492 EGVVGPELHHK ddPTM_A549_PD325901_60min_R1 2 EGVVGPELHHK 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 113.47 2.7340999999999998e-05 7970100.0 1141.93 1286.6100000000001 1240.69 984.24 1422.8000000000002 1145.45 1365.31 1051.25 1444.4 1387.5700000000002 1220.17 False True 1257.8578929555645 1395.037140058188 1324.8906842750514 1045.0342694287774 1322.8674363935338 1136.1218349727374 1417.267619176299 1030.2819940603295 1383.6968910363037 1299.9585933958233 1070.0968252949117 1.1754617556302973 1.3036550591332938 1.2381035556384536 0.976579169965085 1.236212840860415 1.0617000332279554 1.324429327958906 0.9627932442247835 1.2930576545304355 1.2148046444652925 1.0 10.063525626197736 -11.063032455365565 1.3590957789604599 0.999524196741203 1.1859234453339995 0.0 0.13531723935513887 0.4892935587751834 1.6057014039465007 0.08345990974753546 0.018287369982300072 8.649032810650092e-12 11.063032455365565 0.18639924859279655 EHALLAYTLGVK ddPTM_A549_MK2206_60min_R1 2 EHALLAYTLGVK 12 0 Q5VTE0;P68104;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488;A0A2R8Y660 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 107.18 0.00014480000000000002 44891000.0 2041.53 2344.62 2503.01 2054.75 3163.6 2919.6499999999996 2295.75 2583.86 3201.58 2924.9799999999996 3090.5299999999997 False True 2386.090353383615 2463.9511433182793 2857.974455479298 2558.1638422412343 2698.238630795577 3228.6054250931834 2712.8580583306675 2950.1300677393783 2476.4272418726932 2264.2249865131635 2323.0661067112155 1.0271297689249246 1.0606461590567975 1.2302596328286828 1.1012014831824346 1.1614988583409263 1.3898035082884264 1.1677920187003563 1.2699294519499933 1.0660166900625108 0.9746709230408626 1.0 11.181814493680717 -8.937119896578269 5.96890212728484 1.0285202486321716 1.1779495492753014 0.3615493163052734 0.09662555307265187 0.17553642707848297 11.58147096083424 0.01730671291650508 0.018207030531003292 1.1557931159407756e-09 8.937119896578269 0.14942930064312976 EHALLAYTLGVK ddPTM_A549_PD325901_60min_R1 2 EHALLAYTLGVK 12 0 Q5VTE0;P68104;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488;A0A2R8Y660 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 96.103 0.00027661 82200000.0 4157.8 4535.5 4836.200000000001 4183.5 5323.7 4222.8 4541.2 5245.6 5034.1 4972.7 5217.8 False True 4579.896795189415 4917.722502338633 5164.413614433101 4441.905293582144 4949.781677767962 4188.410916864876 4714.017851039991 5140.972392906409 4822.534283554316 4658.722873353708 4576.043678359403 1.0008420192421312 1.074666862467914 1.1285761188985504 0.9706868215852891 1.0816727342826742 0.9152908519366447 1.030151410777192 1.1234535232298184 1.0538654397816596 1.0180678334398998 1.0 12.159885107375366 -10.779701885364064 1.1498868211117048 1.0011214886134856 1.0433541392277514 0.040083843743746406 0.06042707305547788 1.1247109462810347 2.7455657014607717 0.035481224819911096 0.009982042174169451 1.6607264959239624e-11 10.779701885364064 0.04223265061426584 EHAPLAS(ph)PVENK ddPTM_A549_MK2206_60min_R1 2 EHAPLASPVENK 12 0 Q9ULJ3 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 EHAPLAS(1)PVENK;EHAPLAS(1)PVENK 100.4 7.4897e-05 39395000.0 4491.8 4888.3 4271.8 3460.0 5813.200000000001 5240.0 4600.700000000001 5623.0 6108.9 6177.6 6257.9 True False 5249.906026033671 5137.093590382556 4877.605474575195 4307.700155325303 4958.085980699478 5794.493321969506 5436.587637574606 6420.077469715283 4725.243903908719 4782.075869470467 4703.890720746313 1.1160773788555889 1.092094586238073 1.036930014777495 0.9157738585053373 1.0540393633789253 1.2318511772420937 1.1557640175603494 1.3648440941452573 1.0045394726259753 1.0166213786343552 1.0 12.19963882900544 -8.93503715256796 24.999997400908327 1.0019951088866743 1.1174361930485852 0.1803581079288057 0.10778790206706028 75.49405007033397 29052.344132820403 0.019777317512077088 0.021054427406656095 1.1613492597046164e-09 8.93503715256796 0.1154410841619109 EHCDT(ph)EGEADDFDPGK ddPTM_A549_MK2206_60min_R1 2 EHCDTEGEADDFDPGK 16 0 Q9H8M2 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 EHCDT(1)EGEADDFDPGK;EHCDT(1)EGEADDFDPGK 150.91 7.1697e-15 12046300.0 1414.85 2263.0 1457.98 759.98 1795.1100000000001 1656.4 1496.48 1356.28 2197.63 2164.6099999999997 2029.29 True False 1653.6420902386003 2378.1770339454865 1664.7434874809542 946.1751341167989 1531.0516969678388 1831.6791485706665 1768.3710452491248 1548.5368434333 1699.8703138939788 1675.6230976130644 1525.3612874451949 1.0840986354178825 1.5590909861942677 1.0913765159657411 0.6202957567525091 1.0037305322807653 1.2008165958102417 1.1593129180634598 1.0151934864080112 1.1144050448147051 1.0985089967895676 1.0 10.574935275451253 -5.973246853278047 23.500143458363272 1.0370355955314214 1.322505279604652 0.2887724422034945 0.17606339986648026 99.67885583431759 87556.19646658817 0.023254700370051073 0.07229777111957127 1.063538330479811e-06 5.973246853278047 0.2854696840732305 EHCDT(ph)EGEADDFDPGK ddPTM_A549_PD325901_60min_R1 2 EHCDTEGEADDFDPGK 16 0 Q9H8M2 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 EHCDT(1)EGEADDFDPGK;EHCDT(1)EGEADDFDPGK 144.5 2.2036e-14 16623900.0 2079.9700000000003 2068.7 2129.5 1924.5500000000002 1703.32 1650.52 1851.69 2158.8999999999996 1635.27 2218.1000000000004 2567.8999999999996 True False 2291.1270232070156 2243.0366091032797 2274.0206757237684 2043.425082529823 1583.6846793349978 1637.0787123481618 1922.157076233647 2115.8390458757126 1566.545288704607 2078.048787456685 2252.0645792592863 1.0173451704304932 0.9959912472141559 1.0097493192098885 0.9073563437518805 0.7032145942528337 0.7269235204998447 0.8535088620175594 0.9395108228075862 0.6956040706522947 0.9227305498229381 1.0 11.137032482791277 -6.423890042000245 4.210838904286595 0.8395804795315494 1.004922565800728 0.3948544958638974 0.09331664244033454 0.24571647775537264 7.540156761243762 0.01743726812489046 0.0417518450747004 3.7679918780905734e-07 6.423890042000245 0.16534208626917857 EHCDT(ph)EGEADDFDPGKK ddPTM_A549_PD325901_60min_R1 2 EHCDTEGEADDFDPGKK 17 1 Q9H8M2 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 EHCDT(1)EGEADDFDPGKK;EHCDT(1)EGEADDFDPGKK 65.78399999999999 0.00090026 12956200.0 3263.1000000000004 3143.5 3080.0 2703.0 2913.7 2681.6 2319.4 3215.2 3109.2 3084.4 3245.6000000000004 True False 3594.367509832742 3408.4137771142114 3289.027321544592 2869.958171041599 2709.0517637193134 2659.7619386816477 2407.666036224381 3151.070313724396 2978.5311365342513 2889.650457613003 2846.411775553542 1.2627714446318101 1.1974422697332245 1.1554994782527466 1.008272308205821 0.9517427474780888 0.9344262701289603 0.8458600603407642 1.1070324893915275 1.0464161096140125 1.015190592742349 1.0 11.474928668795185 -6.077670060375936 2.2813328035661398 1.0033698197750665 1.2333586318008931 0.6890211108070173 0.06544181467469767 0.1509653575703698 1.5146152030988413 0.010024255372884048 0.036244555760003065 8.362380787944168e-07 6.077670060375936 0.22998881202582666 EHDYRDEHFDFIQSHIR ddPTM_A549_PD325901_60min_R1 1 EHDYRDEHFDFIQSHIR 17 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 0 57.498999999999995 0.0014295999999999998 2209000.0 125.8 0.0 197.65 147.42 0.0 168.21 205.38 230.33 119.8 178.57 205.76 False True 138.5711233909347 0.0 211.06371756600274 156.52579858488818 0.0 166.8401535298478 213.19584828824836 225.73588745961052 114.76522261572214 167.2950597250531 180.45282442010634 0.7679077555934053 0.0 1.1696337712876812 0.8674056451479284 0.0 0.9245638247336749 1.181449217951358 1.2509412816619714 0.6359846291379788 0.9270847395304765 1.0 7.495477914029498 EHFAQFGHVR ddPTM_A549_MK2206_60min_R1 2 EHFAQFGHVR 10 0 Q9GZT3-2;Q9GZT3;H0YJW7;A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;H0YJ07;H0YJU7 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 0 ; 103.7 0.00035889 9633000.0 333.12 197.22 287.142 174.45 515.9 180.375 224.0 214.55 440.15999999999997 482.09000000000003 193.971 False True 389.34251199793806 207.25765560527125 327.8630533218949 217.19025783135814 440.0117934085978 199.46216277676527 264.6979004970355 244.96311953181828 340.4644627910858 373.1855341739537 145.80264737274226 2.6703391125854514 1.4214944607653124 2.2486769563498936 1.4896180676069244 3.017858738077055 1.3680284025765546 1.8154533217791262 1.6801006288011615 2.335104807258359 2.559525090240032 1.0 7.187873105028409 -10.910651644671361 1.0632479726811546 0.976906529233893 2.0048901876001497 0.0 0.6804975284827042 0.45630564950779257 0.8814694772376024 0.3629487562765926 0.07854205701687635 1.2284241769663884e-11 10.910651644671361 1.0279836583662567 EHFAQFGHVR ddPTM_A549_PD325901_60min_R1 2 EHFAQFGHVR 10 0 Q9GZT3-2;Q9GZT3;H0YJW7;A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;H0YJ07;H0YJU7 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 0 ; 111.61 0.00015335 7622000.0 362.21000000000004 278.34 175.01 233.92 497.72 326.66 218.08299999999997 233.06799999999998 539.21 517.24 394.05 False True 398.98129255509116 301.7966886343149 186.88723102062303 248.36870712913475 462.7618642407853 323.9997892637779 226.38226790459657 228.419275901691 516.5488788532851 484.58137812726943 345.584348088758 1.154512045356345 0.8732938580794841 0.5407861555484103 0.7186920024090474 1.3390706691436502 0.9375418506528067 0.6550709520167672 0.6609653393301974 1.494711440810443 1.4022086961033668 1.0 8.4328940674437 -8.755360977930401 24.99834934951527 1.2336137373067406 0.8568084774244851 0.37572100166063316 0.24811374616708015 142.44502308012147 585826.0588604218 0.04789909602363269 0.05363469297444522 1.7564630658627153e-09 8.755360977930401 -0.37680525988225555 EHFAT(ph)IR ddPTM_A549_MK2206_60min_R1 2 EHFATIR 7 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 EHFAT(1)IR;EHFAT(1)IR 96.948 0.01042 22378000.0 504.57000000000005 530.53 366.077 319.68 687.1800000000001 546.15 644.5799999999999 591.55 683.53 655.06 638.07 True False 589.7290804478853 557.5317109231547 417.99222325859455 398.0016143509806 586.0967323018417 603.9432304949706 761.6918424213354 675.4040240458966 528.7115463731162 507.0814910410718 479.6196091638734 1.2295766669673223 1.1624456137127221 0.8715077850701004 0.8298276524698845 1.2220032732264454 1.2592129657664166 1.5881165570965747 1.4082076944754958 1.1023559843494002 1.0572576294890716 1.0 8.90574683406721 -4.187789563284826 16.550092473174438 1.1161238806832663 1.0541942494799423 0.0 0.21610904681227772 0.0 0.0 0.030817216637672073 0.0 6.489488045111648e-05 4.187789563284826 -0.061929631203323954 EHFAT(ph)IR ddPTM_A549_PD325901_60min_R1 2 EHFATIR 7 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 EHFAT(1)IR;EHFAT(1)IR 113.66 0.006660899999999999 31906000.0 1084.81 1053.45 1446.56 1046.92 1361.77 1422.94 1516.73 1220.44 1788.94 1578.3 1613.89 True False 1194.9391126050864 1142.2279285830964 1544.7322604719295 1111.585870672169 1266.1239730514635 1411.3520484142537 1574.4499901365016 1196.097366783342 1713.7570730064278 1478.6458686456363 1415.3917612916284 0.8442461976143156 0.8070047882296179 1.0913814130599928 0.785355617484859 0.8945395950984275 0.9971458694420489 1.112377529101712 0.8450645252391696 1.2108005146522285 1.0446901763058765 1.0 10.466985711462472 -7.591911386202129 1.1210549850120373 1.0869958240579687 0.881355811880653 0.26554149822331274 0.11493761362924204 0.4029031285939037 1.0182266142994703 0.02136072465495362 0.0387471048985172 2.5591079961064767e-08 7.591911386202129 -0.20564001217731565 EHGHS(ph)YSNR ddPTM_A549_MK2206_60min_R1 1 EHGHSYSNR 9 0 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 EHGHS(0.999)YS(0.001)NR 106.29 0.00016389 7958200.0 314.0 403.0 297.62 274.52 1033.3 792.9 546.12 699.48 1244.7 1081.9 1302.1 True False 366.9955234370574 423.51097864782645 339.8269912784002 341.7774123236712 881.3029388042331 876.8041517155766 645.3429349082193 798.6334320676586 962.7774373774641 837.4980385878176 978.7526338681953 0.3749624887205966 0.43270481630689434 0.34720416530103904 0.34919692728990087 0.900434806822614 0.8958383572877846 0.6593524375589318 0.8159706594211908 0.9836780040860841 0.8556789628017493 1.0 9.934800474542103 -6.921696102372925 0.5530527821709972 0.9941096549195486 0.2731789758624169 0.7243701007088872 0.1335979245212471 0.37268546468426145 0.1901235013318883 0.028436933475042392 0.12542848380582095 1.1975782437291415e-07 6.921696102372925 -0.7209306790571317 down EHGHS(ph)YSNR ddPTM_A549_PD325901_60min_R1 2 EHGHSYSNR 9 0 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 EHGHS(0.995)YS(0.005)NR;EHGHS(0.996)YS(0.004)NR 85.522 0.00038937 23781000.0 624.61 840.96 663.28 1064.26 1083.8 873.15 807.46 884.08 1101.73 1327.23 1240.5700000000002 True False 688.0199473864211 911.8306505493764 708.2941694266552 1129.996923090171 1007.6776269070224 866.0393558919601 838.1883321590665 866.4463308526571 1055.4281194692785 1243.4284712935105 1087.9877546211676 0.6323783925545987 0.8380890746944774 0.6510129975435983 1.0386118026517963 0.9261847135934826 0.7960010139944186 0.7704023584814333 0.7963750760727539 0.9700735279293412 1.1428699137578682 1.0 10.087446603707386 -2.3187683302665594 0.11399161773476948 1.0873878746629353 2.109612590177769e-14 0.4525899475291355 0.11357525015527802 61.44100898177604 0.5038277958218037 0.4732421122843292 10.511832158320171 0.004799894255675921 2.3187683302665594 -1.0873878746629142 EHGNRS(ph)PSHK ddPTM_A549_MK2206_60min_R1 1 EHGNRSPSHK 10 1 Q8NAP3 Q8NAP3 ZBTB38 Zinc finger and BTB domain-containing protein 38 1 EHGNRS(0.991)PS(0.009)HK 41.54 0.03694 3718700.0 303.56 106.34 319.22 116.36 471.59 610.92 608.92 794.56 648.6 391.17 289.0 True False 354.7935066705513 111.75225178513615 364.49019607516595 144.8682052235989 402.2197357114957 675.5671489041247 719.5528820118525 907.1913132379462 501.69313560136806 302.8044253206364 217.23332400576624 1.633237019662479 0.5144342024714855 1.6778742292112188 0.6668783709250498 1.8515563279822536 3.1098688564291934 3.3123503739819986 4.176114863545824 2.3094667353524967 1.3939133266339874 1.0 7.7631016220614235 -6.9191828199425185 6.769011645284158 2.095631709291304 1.1259243830972336 0.27343358681279184 0.9402894456868821 0.35172446193256857 24.30555548298941 0.16631369419219294 0.31602764656425697 1.204528777035649e-07 6.9191828199425185 -0.9697073261940703 EHGPFRS(ph)VEDLVR ddPTM_A549_MK2206_60min_R1 1 EHGPFRSVEDLVR 13 1 Q7L9B9 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 EHGPFRS(1)VEDLVR 42.277 0.023869 2818000.0 490.77 488.03 315.6 441.59 616.01 511.46 567.9 384.63 692.7 856.43 559.99 True False 573.5999778254924 512.8686424553317 360.35682564163386 549.7795698237281 525.3957450235126 565.5823577203292 671.080078983333 439.1524803799732 535.8045560145968 662.9618681835325 420.9290280622461 1.3626999792959624 1.218420703405349 0.8560987758448083 1.3061098978006997 1.2481813084789632 1.3436525400113106 1.594283202735296 1.0432934083962302 1.2729094937481078 1.5749967903983448 1.0 8.717433193864244 -10.709594898662424 0.7974926136389568 0.9875493804765393 1.2479524865698106 0.0 0.2453671764849953 0.9438423403726812 0.9822886892171586 0.15560460407425108 0.03347485154906419 1.951664224914134e-11 10.709594898662424 0.26040310609327133 EHGPFRS(ph)VEDLVR ddPTM_A549_PD325901_60min_R1 1 EHGPFRSVEDLVR 13 1 Q7L9B9 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 EHGPFRS(1)VEDLVR 110.35 2.2864e-05 5097500.0 233.21 124.24 269.47 279.01 170.45 296.12 163.96 268.32 74.693 312.66 224.28 True False 256.88530751987196 134.7101408203179 287.7578546547472 296.2438140223147 158.47818002057758 293.7084968982731 170.19958752235462 262.968147107032 71.55391296190432 292.9185942411106 196.69498182805907 1.3060084458302463 0.6848682135575516 1.4629649011904673 1.5061076356349359 0.8057052526083828 1.4932180484147703 0.8652970499833829 1.3369336861725614 0.3637810802130843 1.48920217241315 1.0 7.619816341167864 -8.748205148374197 24.999386510636445 0.6995632683383384 1.1733823758501574 0.0 0.3857093643078015 209.80786190083916 396325.5764542236 0.056103574942619486 0.06343267606307297 1.7856438881613783e-09 8.748205148374197 0.473819107511819 EHIEIIAPS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 EHIEIIAPSPQR 12 0 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 EHIEIIAPS(1)PQR;EHIEIIAPS(1)PQR 87.51899999999999 8.6139e-05 19873800.0 243.99 373.51 380.66999999999996 150.03 428.15 418.51 486.56 428.15 445.63 438.8 584.19 True False 285.1695470172218 392.5200636098006 434.65473009189066 186.78735673510263 365.1697021668755 462.7964504155456 574.9616538653465 488.8415736543836 344.69551652488076 339.6747752401644 439.11950017622394 0.6494121689034075 0.8938798287306248 0.9898324486101358 0.42536793893266556 0.8315952765029303 1.0539191500942677 1.3093512213295184 1.1132313036843173 0.7849697323542915 0.773536076407103 1.0 8.778469792066263 -7.007790237686049 24.80346300972165 0.9573411510142824 0.751009570087858 0.27699118683380775 0.19462525997154798 455.2958388816092 1449631.8933212408 0.03005018576413505 0.055076039267062324 9.822222374662045e-08 7.007790237686049 -0.20633158092642445 EHIEIIAPS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 EHIEIIAPSPQR 12 0 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 EHIEIIAPS(1)PQR;EHIEIIAPS(1)PQR 110.97 2.2656999999999997e-05 31760000.0 561.78 811.81 779.52 768.05 983.98 788.6600000000001 745.01 675.6800000000001 722.83 888.6500000000001 854.33 True False 618.8114920394221 880.2240777474424 832.4229148345582 815.4907041318911 914.868639346717 782.2374144393898 773.361763235115 662.203032339294 692.4519688090353 832.5404873420424 749.2528260440773 0.8259047821102492 1.174802479417889 1.1110040374883927 1.0884052429105113 1.2210412927997376 1.0440233086199557 1.0321773056477193 0.8838178640387774 0.9241899993424909 1.111160957160094 1.0 9.549308810104614 -7.89159266494888 2.8136852367752856 0.9573376117632756 1.0917988181491058 0.1299112893165526 0.10844008979934684 0.2520006524271393 4.049796358243273 0.015057240735939609 0.02142941887564419 1.283533875003679e-08 7.89159266494888 0.13446120638583026 EHLLLAR ddPTM_A549_MK2206_60min_R1 2 EHLLLAR 7 0 P49411 P49411 TUFM Elongation factor Tu, mitochondrial 0 ; 103.29 0.011201000000000001 3419600.0 182.16 292.34 163.14499999999998 72.333 285.59000000000003 294.9 239.397 245.35299999999998 306.49 357.75 445.77 False True 212.9041546155871 307.2188573149022 186.2814141929796 90.05458824715173 243.58008931878527 326.10612226122305 282.8923360950394 280.1325391120495 237.07050436395812 276.93402653183415 335.07300637387686 0.635396318311679 0.9168714025626559 0.5559427666492641 0.2687610954451764 0.7269463212055849 0.9732390137609339 0.8442707431328745 0.836034338139061 0.7075189581205272 0.8264886196855534 1.0 8.388331656862746 -7.0010101473012245 24.998753927313654 0.8615292866140097 0.599964778474965 0.3938760120922914 0.15692126008435697 35.40938297447208 876346.3840062363 0.025602779020038248 0.04795133813425304 9.976767528084171e-08 7.0010101473012245 -0.26156450813904475 EHLLLAR ddPTM_A549_PD325901_60min_R1 2 EHLLLAR 7 0 P49411 P49411 TUFM Elongation factor Tu, mitochondrial 0 ; 103.29 0.011201000000000001 3260500.0 199.16 322.31 135.3 372.0 309.93 393.79 447.46000000000004 442.66999999999996 447.65 315.73 317.95 False True 219.37857658615704 349.47219484704345 144.48227162499455 394.9775951267019 288.16158600045554 390.58310480065836 464.48833515950747 433.8405995821032 428.8368272448084 295.79475391718125 278.8441656511119 0.7867425738455011 1.2532885313594868 0.5181470133600352 1.4164814752512893 1.0334144353624437 1.4007218113695574 1.6657631479393133 1.5558532435816566 1.5379085527698162 1.0607887499689623 1.0 8.12331527508261 -6.288136449636689 24.98148654299218 1.3134787402624788 0.8927821827099508 0.39113980308290164 0.26518559584296547 672.2983995285884 629094.5926850822 0.04125566656475257 0.09589354098317843 5.150667919187654e-07 6.288136449636689 -0.420696557552528 EHMMDGVT(ph)TRTFCGTPDYIAPEIIAYQPYGK ddPTM_A549_MK2206_60min_R1 4 EHMMDGVTTRTFCGTPDYIAPEIIAYQPYGK 31 1 P17252 P17252 PRKCA Protein kinase C alpha type 1 EHMMDGVT(0.316)T(0.316)RT(0.282)FCGT(0.087)PDYIAPEIIAYQPYGK;EHMMDGVT(0.311)T(0.311)RT(0.311)FCGT(0.066)PDY(0.003)IAPEIIAYQPYGK;EHMMDGVT(0.321)T(0.321)RT(0.294)FCGT(0.063)PDY(0.002)IAPEIIAYQPYGK;EHMMDGVT(0.25)T(0.25)RT(0.25)FCGT(0.25)PDYIAPEIIAYQPYGK 89.333 1.0347000000000002e-09 43769900.0 4816.780000000001 5301.6 5427.59 4856.73 6536.530000000001 5196.540000000001 5511.22 5134.88 7419.799999999999 7330.1900000000005 8448.6 True False 5629.734705035501 5571.428795035521 6197.303876059172 6046.629068026892 5575.01509588893 5746.434413615923 6512.53733561282 5862.764964910479 5739.227146985862 5674.294987961945 6350.579450502133 0.8864915003292124 0.8773103050612168 0.9758643166914726 0.9521381655257918 0.8778750253172756 0.9048677303236572 1.0255028515701636 0.923185830616908 0.9037328312666127 0.8935082274284883 1.0 12.632672519417156 -9.080705698272487 0.009780942138509338 1.8895574275027731 5.948298141188982e-07 0.001710810857323053 0.049217885502167914 1346.1050069340479 8.54849966539695 833.9534013054713 816.6326399713674 8.304133104293438e-10 9.080705698272487 -1.889556832672959 EHMMDGVT(ph)TRTFCGTPDYIAPEIIAYQPYGK ddPTM_A549_PD325901_60min_R1 8 EHMMDGVTTRTFCGTPDYIAPEIIAYQPYGK 31 1 P17252 P17252 PRKCA Protein kinase C alpha type 1 EHMMDGVT(0.249)T(0.249)RT(0.249)FCGT(0.249)PDY(0.004)IAPEIIAYQPYGK;EHMMDGVT(0.249)T(0.249)RT(0.249)FCGT(0.249)PDY(0.002)IAPEIIAYQPYGK;EHMMDGVT(0.312)T(0.312)RT(0.312)FCGT(0.064)PDY(0.002)IAPEIIAYQPYGK;EHMMDGVT(0.237)T(0.237)RT(0.237)FCGT(0.237)PDY(0.052)IAPEIIAYQPYGK;EHMMDGVT(0.312)T(0.312)RT(0.312)FCGT(0.063)PDYIAPEIIAYQPYGK;EHMMDGVT(0.25)T(0.25)RT(0.25)FCGT(0.25)PDYIAPEIIAYQPYGK;EHMMDGVT(0.25)T(0.25)RT(0.25)FCGT(0.25)PDYIAPEIIAYQPYGK;EHMMDGVT(0.312)T(0.312)RT(0.312)FCGT(0.065)PDYIAPEIIAYQPYGK 133.47 4.0688e-28 249476300.0 9727.48 9923.23 10864.630000000001 10920.150000000001 10861.93 11351.02 10634.47 12097.000000000002 10661.06 10968.210000000001 11036.41 True False 10715.00660860771 10759.495417678709 11601.9691261276 11594.662864039936 10099.025508424245 11258.581056538691 11039.17057525527 11855.715845087088 10213.012723034812 10275.675348753572 9679.001535567199 1.1070363579583624 1.1116327834168684 1.198674169385563 1.1979193123829253 1.0433953823969957 1.163196535837612 1.1405278255912958 1.2248903775375144 1.055172135835013 1.0616462153656852 1.0 13.240642514601884 -8.938876860483862 6.028666722390059 1.0238430322690288 1.1473351595727785 0.49109046104514853 0.049816641697606606 0.10701111625173482 7.323911017658527 0.008741329516669274 0.009194106293271529 1.1511267322458128e-09 8.938876860483862 0.1234921273037497 EHMMDGVTTRT(ph)FCGTPDYIAPEIIAYQPYGK ddPTM_A549_MK2206_60min_R1 1 EHMMDGVTTRTFCGTPDYIAPEIIAYQPYGK 31 1 P17252 P17252 PRKCA Protein kinase C alpha type 1 EHMMDGVT(0.239)T(0.239)RT(0.258)FCGT(0.258)PDY(0.006)IAPEIIAYQPYGK 59.158 0.0018024999999999998 6240400.0 445.84 493.9 653.18 503.01 600.72 890.45 474.51 518.75 650.89 1118.6 879.96 True False 521.0868922585271 519.0374003825343 745.8107457940503 626.2474725809768 512.3548837689718 984.6768279671281 560.7223248430731 592.2844011052466 503.46445425774675 865.9074830985601 661.4416463394949 0.7878047823905412 0.7847062598113614 1.127553352471023 0.9467917178283416 0.7746033026562678 1.4886828390931524 0.8477275780050806 0.8954446766136157 0.7611623142328356 1.3091215043543236 1.0 9.369470074547658 -4.182980285832883 16.819529530859054 0.9195055132908677 0.9511760081060403 0.0 0.2361793209107506 0.0 0.0 0.026332205377968477 0.0 6.561750517401307e-05 4.182980285832883 0.03167049481517259 EHMMDGVTTRTFCGT(ph)PDYIAPEIIAYQPYGK ddPTM_A549_MK2206_60min_R1 1 EHMMDGVTTRTFCGTPDYIAPEIIAYQPYGK 31 1 P17252 P17252 PRKCA Protein kinase C alpha type 1 EHMMDGVT(0.064)T(0.064)RT(0.387)FCGT(0.482)PDY(0.003)IAPEIIAYQPYGK 102.05 7.543000000000001e-15 17783000.0 2030.0 1706.2 2017.5 1350.5 1837.1 1638.4 1505.3 1430.4 2245.3 2848.9 2409.4 True False 2372.6143712650505 1793.0382922305737 2303.6118369201404 1681.3725606262485 1566.8650235916548 1811.7744005181007 1778.7935250811945 1633.1635804162788 1736.7431350073268 2205.3315113530184 1811.079483942883 1.310055352236477 0.9900384318456129 1.2719551280570913 0.9283814297127089 0.8651553051556018 1.0003837029690739 0.982173085638738 0.9017625095397441 0.9589546733897514 1.2176889699792819 1.0 10.82263414877119 -6.272860347200136 24.756905056347527 0.9650754761064079 1.1706185190877294 0.38870547663862254 0.11452261074393702 323.82653023656553 701949.7166931378 0.010918055363010729 0.025583714361004765 5.335064235430509e-07 6.272860347200136 0.20554304298132153 EHMQPTHPIR ddPTM_A549_MK2206_60min_R1 2 EHMQPTHPIR 10 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ; 73.067 0.0017969000000000001 13115200.0 347.42 391.40999999999997 331.751 633.5699999999999 346.842 353.16999999999996 326.06 257.448 562.34 765.3299999999999 658.86 False True 406.0560023965045 411.33109715271894 378.79828030240054 788.7946784420377 295.8220012588191 390.54221498472714 385.3008814109972 293.94204240143347 434.97088787245326 592.4414214552306 495.2468783890629 0.8199062328617231 0.8305576775984841 0.7648675778321998 1.5927302379125052 0.5973222935217033 0.7885808715343776 0.7779975972070786 0.5935262900748955 0.8782910238370908 1.1962547313419154 1.0 8.952004071407787 -4.411750576514681 17.45249607872851 0.8978130486827828 0.8698687015505568 0.0 0.27307015611339347 0.0 0.0 0.03197485804972463 0.0 3.874801181463682e-05 4.411750576514681 -0.027944347132225933 EHMQPTHPIR ddPTM_A549_PD325901_60min_R1 2 EHMQPTHPIR 10 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ; 73.067 0.0017969000000000001 10290100.0 377.75 533.86 410.13 485.14 324.23 524.15 408.28999999999996 502.75 451.77 450.59000000000003 520.02 False True 416.0989019151475 578.8502557818331 437.96388811204 515.1059959671188 301.4572033327771 519.8814961813783 423.8276993748606 492.7222568502548 432.78367797249393 422.1396705018295 456.0608366783811 0.9123758684163991 1.2692391216877155 0.9603190032756458 1.12946772566305 0.6610021713953217 1.1399389168511398 0.9293227247086517 1.0803871265046328 0.9489604087134048 0.9256214008122053 1.0 8.833082476708478 EHNSMWASLS(ph)SPDAEAVEPDFSSIER ddPTM_A549_MK2206_60min_R1 1 EHNSMWASLSSPDAEAVEPDFSSIER 26 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 EHNSMWAS(0.034)LS(0.482)S(0.482)PDAEAVEPDFS(0.001)S(0.001)IER 44.3 0.00804 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EHNSMWASLS(ph)SPDAEAVEPDFSSIER ddPTM_A549_PD325901_60min_R1 1 EHNSMWASLSSPDAEAVEPDFSSIER 26 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 EHNSMWAS(0.027)LS(0.487)S(0.487)PDAEAVEPDFSSIER 72.035 1.9415e-05 3650400.0 683.39 678.92 614.63 685.79 660.48 928.92 530.42 481.88 586.69 723.99 620.47 True False 752.7672497148717 736.134971069947 656.3424878704391 728.1496907579053 614.0901633323031 921.3551835024441 550.6054233569608 472.26852537245304 562.0334595694326 678.277147843094 544.1561234833954 1.3833663120357074 1.352801042387626 1.20616576667168 1.3381264297765905 1.1285183366149176 1.6931816876458594 1.0118519292446448 0.8678915939588137 1.0328533215276456 1.2464752643067356 1.0 9.08787682334711 -7.939792778777002 24.999996296414487 1.0017794962032516 1.334881024372218 0.5017664825008366 0.15637535365968924 35.69742623701873 14822.529036968217 0.01969975654371379 0.027219124222938283 1.148701587400481e-08 7.939792778777002 0.33310152816896643 EHPGQPEDS(ph)PEAEASTLDVFTER ddPTM_A549_MK2206_60min_R1 2 EHPGQPEDSPEAEASTLDVFTER 23 0 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 EHPGQPEDS(1)PEAEASTLDVFTER;EHPGQPEDS(1)PEAEASTLDVFTER 121.26 5.7332e-16 10092700.0 1094.56 1384.49 1208.1799999999998 1224.69 1904.17 1376.49 1439.54 1519.44 2229.7 1780.82 2047.9700000000003 True False 1279.2949685772776 1454.9546273650844 1379.518091266506 1524.739104978423 1624.069115438746 1522.149258159888 1701.0857842924222 1734.8252730898425 1724.6765100992438 1378.531525166795 1539.4025279034224 0.8310334336787166 0.9451424179136881 0.896138642272681 0.9904746012435292 1.0549996417445375 0.9887922298224153 1.1050298758500825 1.1269471380254095 1.120354474438959 0.8954977662952623 1.0 10.58815480617782 -6.307477317323798 0.964074563098004 1.0653406900090494 0.8610514531743668 0.46375109554684346 0.06910223736212744 0.3499052231700057 0.5369725762739413 0.009102876033762025 0.05048284242158554 4.926320722557563e-07 6.307477317323798 -0.20428923683468259 EHPGQPEDS(ph)PEAEASTLDVFTER ddPTM_A549_PD325901_60min_R1 2 EHPGQPEDSPEAEASTLDVFTER 23 0 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 EHPGQPEDS(1)PEAEASTLDVFTER;EHPGQPEDS(1)PEAEASTLDVFTER 144.89 1.2179000000000001e-27 14739500.0 2695.8 2595.6000000000004 2704.6 3012.8999999999996 2696.2 2736.0 3006.6000000000004 2614.4 2573.1000000000004 2846.2 3495.2 True False 2969.4756314569313 2814.3403212589924 2888.150420081007 3198.9999902076343 2506.8282133850466 2713.718923117908 3121.017808274648 2562.2537410428768 2464.9615551962825 2666.490446264468 3065.312557898305 0.9687350230584372 0.9181250747194966 0.9422042175239815 1.043612985555049 0.8178050903571881 0.8852992547613275 1.0181727798794316 0.8358866160127095 0.8041468883311378 0.8698918612373792 1.0 11.58181847203313 -6.759751368131316 24.9999945309913 0.9016441162259452 0.9627400662914469 0.20990916610040722 0.07030810060897659 86.28403794638047 1277858.3028110466 0.012492992949457389 0.02497513107472934 1.738795997670491e-07 6.759751368131316 0.061095950065501725 EHQEALHQQR ddPTM_A549_MK2206_60min_R1 2 EHQEALHQQR 10 0 F8W785;O00461 F8W785 GOLIM4 Golgi integral membrane protein 4 0 ; 55.083999999999996 0.017584 6694100.0 704.6600000000001 538.11 602.8199999999999 719.41 1030.61 687.4300000000001 642.6700000000001 777.64 1018.0 1026.9 997.44 False True 823.5893807170596 565.4975005463571 688.3089405364059 895.6654822955425 879.0086342408114 760.1733863208967 759.4348201447758 887.8728514226196 787.424625411953 794.9225767869758 749.748120056441 1.0984880904470422 0.7542499746498683 0.9180535730914403 1.1946218447711703 1.1724052528129576 1.013905024881784 1.0129199391491712 1.1842281796662333 1.0502522171748503 1.0602528442847365 1.0 9.550262189411388 -6.040495243047862 24.20160922370634 1.0540502716408133 0.9038147214564828 0.2922575677883015 0.10324708432504044 311.84946763987097 186373.89760063274 0.014077028343462201 0.03725136420306546 9.109714303428668e-07 6.040495243047862 -0.15023555018433055 EHQHEEIQNVR ddPTM_A549_MK2206_60min_R1 3 EHQHEEIQNVR 11 0 Q6DD88;F5H6I7 Q6DD88 ATL3 Atlastin-3 0 ;; 96.103 0.00028258 23095800.0 838.26 1021.9 572.74 728.05 1236.82 564.29 738.46 570.54 643.96 1157.22 1194.45 False True 979.7377945106609 1073.910345112193 653.9631442268357 906.4222826834066 1054.8854164055472 624.0027932546137 872.6286232189327 651.4157922054698 498.1040881928109 895.8031982758049 897.8350998570502 1.0912224245483952 1.1961108952893207 0.7283777882274342 1.0095643206951073 1.17492111477208 0.6950082407715682 0.9719252715313417 0.7255405723269068 0.5547834878276836 0.9977368877853308 1.0 9.810306687676505 -7.268985313289542 24.96789508953083 0.7887706427607761 1.0297023699616004 0.26326560217645534 0.1740263424318703 623.8796425341935 2064283.9261687403 0.0300753287825382 0.04864090898351965 5.382879857089271e-08 7.268985313289542 0.24093172720082423 EHQHEEIQNVR ddPTM_A549_PD325901_60min_R1 2 EHQHEEIQNVR 11 0 Q6DD88;F5H6I7 Q6DD88 ATL3 Atlastin-3 0 ; 115.18 2.1096e-05 14459900.0 348.29999999999995 418.36 501.05 351.83000000000004 274.4 208.3 344.07 427.56 407.92 388.71000000000004 474.14 False True 383.6591595950919 453.6166654345475 535.054266058415 373.5617400360957 255.12709062860947 206.60367386164495 357.1637721323283 419.03198038566893 390.7765409800118 364.1667842623365 415.8237858210984 0.9226484214641709 1.0908867671887075 1.286733189160597 0.8983654922443872 0.6135461686609093 0.49685391001305756 0.8589305958702236 1.007715274291574 0.9397647616727178 0.8757718934794496 1.0 8.699828474918256 -8.256412977908058 23.842006069944183 0.9734727875644346 0.8803953522780645 0.028396453879157457 0.20064815977570857 698.9815366605494 3315512.6473950357 0.03574655744923644 0.045388968478799724 5.540985607423724e-09 8.256412977908058 -0.09307743528637002 EHS(ph)AFGDRPEKR ddPTM_A549_MK2206_60min_R1 2 EHSAFGDRPEKR 12 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 EHS(1)AFGDRPEKR;EHS(1)AFGDRPEKR 59.728 0.0019279 19187700.0 5248.8 4707.299999999999 4073.2 2882.0 5789.700000000001 4375.1 4689.6 3795.2 6480.799999999999 6800.1 6706.2 True False 6134.66911916059 4946.881463496062 4650.8410082493765 3588.0901293778984 4938.042799569215 4838.070178043661 5541.639616834365 4333.181222312547 5012.909147710985 5263.95268712544 5040.865458295747 1.2169872752832098 0.9813555835645215 0.9226274826667894 0.7118004158339482 0.9796021814949819 0.9597697494745975 1.0993428931364344 0.859610568495026 0.9944540653155592 1.0442557395501517 1.0 12.299455733704898 -7.350482952144152 3.7041981270093447 0.9926573341116739 0.9473036843098308 0.011738959178463348 0.12184993264509944 0.8590264563887546 22.172464050174572 0.018009412440315776 0.029688730988429717 4.461871389290633e-08 7.350482952144152 -0.04535364980184309 EHS(ph)AFGDRPEKR ddPTM_A549_PD325901_60min_R1 1 EHSAFGDRPEKR 12 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 EHS(1)AFGDRPEKR 61.641000000000005 0.0016504000000000002 23756000.0 3526.2 3011.1 3460.5 3341.8 3432.3 2956.9 3603.0 3060.0 3912.4 3673.4 4084.3 True False 3884.177228148758 3264.855964456369 3695.350339676968 3548.2153962215407 3191.2270887921886 2932.819986757071 3740.114136637253 2998.9658994764404 3747.975433737491 3441.460897093634 3581.956992510886 1.0843729381089027 0.9114726869369152 1.0316568142507472 0.9905801224414778 0.8909171984656347 0.8187758794672793 1.0441538367035228 0.8372422968077627 1.0463485300280586 0.9607767218559576 1.0 11.80653230008095 EHS(ph)PDSDAYNSGDDKNEK ddPTM_A549_MK2206_60min_R1 1 EHSPDSDAYNSGDDKNEK 18 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 EHS(0.946)PDS(0.053)DAY(0.001)NSGDDKNEK 66.64399999999999 0.00055417 2587500.0 978.83 783.67 1044.9 723.61 983.75 916.36 778.22 864.06 1076.7 998.16 1387.8 True False 1144.0325739041227 823.5554556747938 1193.0825320435463 900.894482484087 839.0416781657449 1013.3286069694623 919.6125005571566 986.5431510727699 832.8291691365906 772.6749627477731 1043.1709586685204 1.0966875222104915 0.7894731432381527 1.1437075794042135 0.8636115442036156 0.8043184783793047 0.9713926548174345 0.8815549291469243 0.9457156977720805 0.7983630700375275 0.7406983067607612 1.0 10.026759896030729 EHS(ph)PSKEK ddPTM_A549_PD325901_60min_R1 1 EHSPSKEK 8 1 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 EHS(0.996)PS(0.004)KEK 56.358999999999995 0.007987600000000001 5186600.0 2051.6 2100.5 2004.8 1677.1 2162.7 1521.3 1232.1 1567.7 1750.5 1984.2 2590.5 True False 2259.876921691905 2277.5165067053917 2140.8577838417527 1780.690658029547 2010.799412909962 1508.9110371854078 1278.9882397309896 1536.4309936631416 1676.9325725277272 1858.9172733743087 2271.884922532491 0.9947145206513361 1.0024788157696927 0.9423266832790628 0.7837943904502851 0.8850797824163141 0.6641670192975315 0.5629634789359355 0.6762802897386492 0.738123905791159 0.8182268630499807 1.0 11.149674044726355 -6.099036682863376 3.592227413234295 0.8177574038439186 0.9955853953248365 0.34167632428920847 0.11839979508421003 0.3178845489520627 7.536063081657706 0.022007255076867 0.06539514429662133 7.960921053278563e-07 6.099036682863376 0.17782799148091788 EHSLQVS(ph)PSLEK ddPTM_A549_MK2206_60min_R1 2 EHSLQVSPSLEK 12 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 EHS(0.001)LQVS(0.999)PS(0.001)LEK;EHSLQVS(1)PSLEK 115.1 8.331e-06 87004000.0 6539.700000000001 7136.7 7182.4 5668.4 10513.3 7810.8 7120.1 7708.099999999999 11256.7 10419.099999999999 10985.9 True False 7643.441479685739 7499.92754668968 8200.972320939387 7057.158254464146 8966.807496884298 8637.333671610579 8413.73000593278 8800.746780066222 8707.075423256118 8065.418073620785 8257.797834584595 0.9256028826080167 0.908223681049581 0.9931185632315657 0.8546053555474519 1.0858594114922855 1.0459609020017957 1.0188830211724396 1.0657498471575189 1.0544064649766427 0.9767032609882865 1.0 13.011541383896397 -6.7672499811229985 24.999993093528918 1.0338321089612303 0.9247138337371427 0.641007146781206 0.041335585006098206 65.06802692185919 279955.18454837037 0.005529529582779996 0.010651972347212131 1.7090313086999053e-07 6.7672499811229985 -0.10911827522408768 EHSLQVS(ph)PSLEK ddPTM_A549_PD325901_60min_R1 2 EHSLQVSPSLEK 12 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 EHSLQVS(1)PSLEK;EHSLQVS(1)PSLEK 158.35 2.2389e-14 134013000.0 6686.9 6445.9 6886.5 6113.700000000001 7791.799999999999 6567.2 6455.200000000001 7880.7 7112.5 6906.7 8005.0 True False 7365.749165364402 6989.11861488802 7353.859301888584 6491.329363779888 7244.530848250731 6513.718900548216 6700.856168420976 7723.513256210451 6813.586359385009 6470.609783295205 7020.435747875925 1.0491868923653285 0.9955391468403681 1.0474932847456853 0.9246333983960866 1.0319203975967741 0.927822593137325 0.9544786689983397 1.1001472748393497 0.9705361040369184 0.9216820744001434 1.0 12.777344863879893 -5.312494427168091 1.1435930206502014 0.988460825049654 1.0659461048352379 0.1087401708750545 0.05338476557385927 2.6186150125953906 2.921410449996596 0.006794983995153468 0.23671391867850214 4.869737739341241e-06 5.312494427168091 0.07748527978558384 EHSNPS(ph)PSQDTDGTK ddPTM_A549_MK2206_60min_R1 7 EHSNPSPSQDTDGTK 15 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EHS(0.003)NPS(0.976)PS(0.02)QDT(0.001)DGTK;EHS(0.008)NPS(0.991)PSQDTDGTK;EHS(0.001)NPS(0.969)PS(0.03)QDTDGTK;EHS(0.026)NPS(0.972)PS(0.001)QDTDGTK;EHS(0.003)NPS(0.983)PS(0.014)QDTDGTK;EHS(0.128)NPS(0.76)PS(0.112)QDT(0.001)DGTK;EHSNPS(0.495)PS(0.495)QDT(0.003)DGT(0.006)K 121.79 4.6826e-07 112715800.0 5703.62 6061.76 5375.09 4205.320000000001 6058.240000000001 5304.84 4679.23 5054.52 7158.78 9080.49 9427.19 True False 6666.251615879196 6370.277692129652 6137.358586622588 5235.623588783992 5167.080921302004 5866.194647732203 5529.38552206582 5771.013688818296 5537.3277602225735 7029.201002325805 7086.158545792116 0.9407426566595426 0.8989747619903924 0.8661051748929691 0.7388521658032894 0.7291794119354423 0.8278384698597594 0.7803079039699535 0.814406515395457 0.7814287140824326 0.9919621409684471 1.0 12.79078802935472 -10.772666831293055 0.9474973397600954 1.0035166056620441 0.8156907381860724 0.5480985626015911 0.06140382051695961 0.38198653764766294 0.5903755074767693 0.05002833891671853 0.011747318536217655 1.6878473597686927e-11 10.772666831293055 -0.18782586747597174 EHSNPS(ph)PSQDTDGTK ddPTM_A549_PD325901_60min_R1 8 EHSNPSPSQDTDGTK 15 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EHS(0.013)NPS(0.983)PS(0.003)QDTDGTK;EHS(0.002)NPS(0.937)PS(0.06)QDT(0.001)DGTK;EHS(0.015)NPS(0.978)PS(0.006)QDTDGTK;EHS(0.001)NPS(0.98)PS(0.01)QDT(0.009)DGTK;EHS(0.001)NPS(0.998)PSQDTDGTK;EHSNPS(0.943)PS(0.057)QDTDGTK;EHS(0.003)NPS(0.995)PS(0.001)QDTDGTK;EHSNPS(0.923)PS(0.077)QDTDGTK 186.72 2.0815e-33 200507100.0 12118.21 11128.570000000002 11427.07 10134.34 13249.529999999999 11272.720000000001 11096.789999999999 12301.929999999998 11779.67 11784.070000000002 11396.05 True False 13348.441758245304 12066.413649619812 12202.57968675408 10760.315165043927 12318.928721197093 11180.918705778406 11519.084415846484 12056.558355472613 11284.611434805875 11040.02180911803 9994.408095512987 1.3355910255694001 1.207316484808846 1.220940707057225 1.0766335597077326 1.2325821202686036 1.1187174466888246 1.152552938179301 1.206330403987149 1.1290925212341618 1.1046198737946746 1.0 13.286905412617061 -14.999999999969607 0.05077650952908444 0.21849410493030927 1.5642697166300503 0.475734728462474 0.0626969805229013 155.95021419937748 0.6038002684381947 16.439104339621792 3.774724864083713 1.0000000000699835e-15 14.999999999969607 1.345775611699741 EHSPDS(ph)DAYNSGDDKNEK ddPTM_A549_MK2206_60min_R1 1 EHSPDSDAYNSGDDKNEK 18 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 EHS(0.457)PDS(0.509)DAY(0.017)NS(0.016)GDDKNEK 56.055 0.0025593000000000005 2239300.0 666.67 907.02 696.87 458.66 716.95 646.56 650.85 628.08 1048.1 1450.2 787.43 True False 779.1875974833847 953.1834438043459 795.6966447556573 571.0317205900297 611.4876047379224 714.9785500482074 769.1010202611413 717.1122634143295 810.7070234717754 1122.5988127923579 591.8893990375796 1.3164412113992152 1.6104080345994294 1.3443333265462623 0.9647608514674115 1.0331112632397368 1.2079597154650388 1.2993998904385016 1.2115646345083457 1.3696934339253184 1.8966361192103107 1.0 9.209183807576322 -10.937643989642954 1.1621746890491722 0.9980957681123053 1.267073626690028 0.0 0.31217420251565986 0.5963988480418589 1.414730576922105 0.1300111752167566 0.02960303474302085 1.15439918202615e-11 10.937643989642954 0.2689778585777227 EHSPYGPS(ph)PLGWPSSETR ddPTM_A549_MK2206_60min_R1 1 EHSPYGPSPLGWPSSETR 18 0 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 EHS(0.002)PYGPS(0.998)PLGWPSSETR 80.41199999999999 8.5539e-05 15987000.0 1780.6 1489.1 1298.7 1584.8 2623.4 1657.5 1395.4 1801.3 2737.6 2222.6 2477.9 True False 2081.121748509631 1564.888829539649 1482.8751884055446 1973.0760711443759 2237.5013351969656 1832.8955498405453 1648.9261176498371 2056.6397912498905 2117.5379710488833 1720.51311633726 1862.569043439061 1.1173393844595594 0.8401776218991737 0.7961450844622399 1.0593304329278843 1.201298466265512 0.9840685134851558 0.8852966409262596 1.1041951966797945 1.1368909939247382 0.9237311885955605 1.0 10.863078190387718 -6.30057573997544 22.33957098017374 1.0596690661632513 0.9101164348561641 0.15290353993861394 0.11559638124555316 148.3043952544024 84653.9366134253 0.015575740428264491 0.036196145543578015 5.005232547931296e-07 6.30057573997544 -0.14955263130708718 EHSPYGPS(ph)PLGWPSSETR ddPTM_A549_PD325901_60min_R1 2 EHSPYGPSPLGWPSSETR 18 0 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 EHSPYGPS(1)PLGWPSSETR;EHSPYGPS(1)PLGWPSSETR 158.0 3.7385999999999996e-23 44187000.0 3349.3 3177.2 2456.4 3125.6 3004.3999999999996 3420.3 2959.8 2825.6000000000004 4039.4 3536.8 4522.6 True False 3689.318470375655 3444.9537943843698 2623.106075533162 3318.661213247366 2793.3813086173277 3392.446210796851 3072.4368086647055 2769.241191359682 3869.6380653918854 3313.4858444059364 3966.348871123505 0.9301548074187992 0.8685453313158897 0.6613402302128161 0.8367043144914594 0.7042701989616149 0.8553070647655634 0.7746259616830956 0.6981839675074444 0.9756171711379928 0.8353994951198938 1.0 11.953595864020055 -8.823281281780506 8.710969486258815 0.9888353921792903 0.7897043599309956 0.3021047176935562 0.08977149933589157 0.14206908896155565 18.37791136024712 0.01287514070451841 0.013697159525253152 1.5021687334676657e-09 8.823281281780506 -0.19913103224829465 EHTALLK ddPTM_A549_MK2206_60min_R1 2 EHTALLK 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 97.602 0.012491 14025500.0 2927.6000000000004 3486.0 2722.0 2280.38 3945.8 3673.2 3280.0 3167.5 4960.1 4415.299999999999 4523.200000000001 False True 3421.707307052 3663.4225100901313 3108.020530407246 2839.0732023701466 3365.3780469696526 4061.895585927173 3875.9335429923053 3616.5028250619152 3836.645269652092 3417.8806634409725 3399.964606030736 1.0063949786367474 1.0774884254948076 0.9141332015322601 0.835030222765937 0.9898273767321769 1.1946876090187315 1.1399923211310237 1.063688374475161 1.1284368263265998 1.0052694835053453 1.0 11.731304012504559 -7.01761181485945 24.50717786351951 1.0779032732987728 0.9572262333477798 0.3921331739933682 0.07702617998717493 537.6639630088448 748170.4262458582 0.012516296125875884 0.021995008565735594 9.602585552896368e-08 7.01761181485945 -0.12067703995099299 EHTALLK ddPTM_A549_PD325901_60min_R1 2 EHTALLK 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 97.602 0.012491 17039300.0 6067.799999999999 6141.9 7073.4 6311.6 7968.4 6991.299999999999 7524.5 7154.5 6839.9 7611.2 8024.8 False True 6683.798589121731 6659.499467999923 7553.443459809583 6701.453197316379 7408.727073487655 6934.365170758126 7810.848965064388 7011.797884903332 6552.442789392975 7130.627533064479 7037.800473398465 0.9496999260472369 0.9462472676188466 1.0732676335966258 0.9522084666433193 1.0527049042511536 0.9853028935629384 1.1098423427302178 0.9963052961513447 0.9310356004208916 1.0131897828045684 1.0 12.780908897908661 -8.534227407476923 24.674182742536413 0.9672354190002155 1.0115606820196466 0.03342956891343829 0.05390258896532508 297.2276558754991 646227.1688336887 0.008961934472197187 0.010166689360220372 2.922621619167112e-09 8.534227407476923 0.04432526301943107 EHVIEALR ddPTM_A549_PD325901_60min_R1 2 EHVIEALR 8 0 H7C123;H7C2C5;F8W7C6;A0A087WV22;X1WI28;P27635 H7C123 RPL10 60S ribosomal protein L10 0 ; 94.11399999999999 0.0027335000000000003 14649500.0 696.02 862.29 723.8699999999999 942.48 1165.3600000000001 748.84 991.3199999999999 964.96 950.1400000000001 853.27 1076.48 False True 766.6794380171577 934.9582045070183 772.9961711839236 1000.6948490726181 1083.5091338737489 742.7416953171106 1029.045225071119 945.7131158035245 910.208920000854 799.3943865800308 944.0797843689547 0.8120917857907787 0.9903381260641722 0.8187826749204385 1.059968517111619 1.147688099897184 0.7867361504976793 1.0899981570508441 1.0017300777557285 0.9641228793064976 0.8467445228841172 1.0 9.882764976956695 -6.261502048299445 24.99999999247689 0.9935487018777137 0.8853975899591416 0.18098751169564886 0.10599922262846276 6.380997603678609 2546183.4371963297 0.012313711045268572 0.03043937422946361 5.476435180588044e-07 6.261502048299445 -0.10815111191857207 EHYPVSSPS(ph)SPSPPAQPGGVSR ddPTM_A549_MK2206_60min_R1 1 EHYPVSSPSSPSPPAQPGGVSR 22 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 EHYPVS(0.046)S(0.086)PS(0.428)S(0.428)PS(0.012)PPAQPGGVSR 57.141999999999996 0.00035778 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EHYPVSSPSS(ph)PSPPAQPGGVSR ddPTM_A549_MK2206_60min_R1 1 EHYPVSSPSSPSPPAQPGGVSR 22 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 EHYPVS(0.02)S(0.107)PS(0.23)S(0.631)PS(0.011)PPAQPGGVSR 75.529 5.7258999999999995e-05 7240300.0 1147.7 1030.4 1355.5 1129.8 1573.1 1387.6 1194.9 1092.2 2123.5 2110.7 1674.3 True False 1341.4037014290138 1082.8429588057572 1547.7302825007437 1406.6010507186486 1341.6990738729694 1534.4349109856662 1411.997862963874 1247.0226947222181 1642.5306405326937 1633.8914040551854 1258.5251016707768 1.0658537518625653 0.8604063259192926 1.2297969110397777 1.1176583199264687 1.066088449163051 1.219232662859565 1.1219465238232846 0.9908604072073823 1.3051234642456664 1.2982588920046843 1.0 10.297518276444885 -5.7635029899415455 24.999632990361512 1.1374126414012573 0.9631300450478133 0.28983689574421245 0.11135878450859935 54.27848381823179 657600.2201764474 0.01672755015957594 0.05603920850190094 1.723840223044618e-06 5.7635029899415455 -0.174282596353444 EHYPVSSPSS(ph)PSPPAQPGGVSR ddPTM_A549_PD325901_60min_R1 1 EHYPVSSPSSPSPPAQPGGVSR 22 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 EHYPVSS(0.001)PS(0.179)S(0.819)PS(0.001)PPAQPGGVSR 115.79 1.9542e-15 11827000.0 3258.2 2765.4 2607.5 3058.8 3277.9 3212.0 3163.7 3175.2 2617.0 3596.0 3546.2 True False 3588.9700654399307 2998.4499631721437 2784.460630171273 3247.735128961172 3047.6716121411046 3185.842536935205 3284.096334743067 3111.868145103786 2507.0165908626464 3368.9479463028015 3110.039881213944 1.15399486904298 0.9641194575298361 0.8953134803803263 1.0442744315206276 0.9799461513501572 1.0243735317283689 1.0559659876326677 1.0005878586640915 0.806104322329166 1.0832491141521303 1.0 11.602717365359018 -8.560318332950201 24.912513709674073 0.9081701019505336 1.0113766252197163 0.0 0.09033973362569314 177.1615613409834 117883.59644053606 0.014966710310313465 0.016970670271797675 2.752210624510437e-09 8.560318332950201 0.10320652326918267 EHYVDLK ddPTM_A549_MK2206_60min_R1 2 EHYVDLK 7 0 Q32Q12;P22392-2;J3KPD9;E7ERL0;P15531;P15531-2;E5RHP0 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 66.682 0.025893 5150500.0 1691.82 2009.09 1753.06 1217.6599999999999 2187.25 1755.5700000000002 1998.97 2141.09 2887.2 2250.0 1777.92 False True 1977.3578549722367 2111.3440994827833 2001.670268565661 1515.9867546628352 1865.5084224325547 1941.343252146948 2362.156973913212 2444.5960643131234 2233.2538099109925 1741.7234373071337 1336.4133959042638 1.4796004447667839 1.5798585272741708 1.4977927299293954 1.1343696189434451 1.3959067068242659 1.4526517454079901 1.7675346424636027 1.8292214608182857 1.671080084018385 1.3032819355485605 1.0 10.384150633767414 -10.801923618296376 1.0866455319191601 1.004624616227426 1.538208952353182 0.3245478581547796 0.1978916529231686 0.33797069181542655 0.718066390674631 0.13380625998640513 0.034617222615440625 1.5778887570693834e-11 10.801923618296376 0.533584336125756 EHYVDLK ddPTM_A549_PD325901_60min_R1 1 EHYVDLK 7 0 Q32Q12;P22392-2;J3KPD9;E7ERL0;P15531;P15531-2;E5RHP0 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 66.682 0.025893 11128000.0 1484.6 1309.2 1591.9 1586.9 1719.9 1683.9 1201.2 1322.2 1532.6 2023.6 1800.5 False True 1635.315499095244 1419.5308786377996 1699.9359068723488 1684.919208888612 1599.1001573328922 1670.186876695266 1246.912323321861 1295.8276837541664 1468.190151760064 1895.8295506502632 1579.0499143098816 1.0356325561817044 0.8989778383656737 1.076556156627449 1.067046198868894 1.0126976625889457 1.0577163277483952 0.7896598530685586 0.820637569471959 0.9297933766721564 1.2006140739881734 1.0 10.624841060666554 EIAIVHS(ph)DAEKEQEEEEQKQEMEVK ddPTM_A549_MK2206_60min_R1 1 EIAIVHSDAEKEQEEEEQKQEMEVK 25 2 Q9H307 Q9H307 PNN Pinin 1 EIAIVHS(1)DAEKEQEEEEQKQEMEVK 241.51 9.3404e-112 22103000.0 2889.3 3273.2 2471.7 2829.0 5158.8 4326.1 4361.0 4739.7 6509.8 4102.9 4606.1 True False 3376.9432033970998 3439.791899032419 2822.2242266743556 3522.105126998634 4399.947353821035 4783.885030567232 5153.337250301662 5411.566989722483 5035.3406940144705 3176.052040412196 3462.2782481071276 0.9753529212284767 0.9935053316159664 0.8151350135470198 1.0172796276336873 1.27082430657517 1.3817159360841793 1.4884237721561107 1.563007534903082 1.4543431616934186 0.9173300967790746 1.0 11.757505957094365 -6.694635295882222 3.852520256781229 1.2838032834391002 0.932528143493814 0.4400965013013818 0.18912568101298008 0.196189079929427 5.788909065099241 0.031580634771471265 0.06729105992545449 2.0200620234665271e-07 6.694635295882222 -0.35127513994528625 EIAIVHS(ph)DAEKEQEEEEQKQEMEVK ddPTM_A549_PD325901_60min_R1 3 EIAIVHSDAEKEQEEEEQKQEMEVK 25 2 Q9H307 Q9H307 PNN Pinin 1 EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK 282.18 1.1860999999999996e-153 45568900.0 8175.9 8718.4 9697.2 7872.900000000001 9470.1 7959.8 8674.1 9030.8 8705.9 9837.900000000001 10028.3 True False 9005.911349220534 9453.130165227458 10355.310306000723 8359.191152346812 8804.952846071412 7894.978027863281 9004.197622149646 8850.673609474456 8340.021298582767 9216.733315053483 8794.882674631375 1.0239944843377917 1.0748443742740061 1.1774244966189673 0.9504607919851727 1.0011450034994878 0.8976786069740478 1.0237996293142186 1.0063435678345098 0.9482811320086573 1.047965465376693 1.0 13.102448616667852 -6.282434798610343 24.957002462207015 0.975648390479038 1.0903634546930947 0.4558167434685413 0.05171737614636175 410.78234182891447 488291.16174427356 0.006398357735221088 0.0148819539509631 5.21873448130836e-07 6.282434798610343 0.11471506421405675 EIANS(ph)NER ddPTM_A549_MK2206_60min_R1 2 EIANSNER 8 0 Q01664 Q01664 TFAP4 Transcription factor AP-4 1 EIANS(1)NER;EIANS(1)NER 62.408 0.01567 3199800.0 655.76 1144.5 763.3 672.12 956.91 835.52 580.54 724.74 877.98 1409.1 1656.1 True False 766.4362562072756 1202.750161445254 871.5474176560805 836.789430172613 816.1498066110119 923.9341718267108 686.016603368522 827.4741144231648 679.1189318459592 1090.7833313375475 1244.8446639652238 0.6156882689009036 0.966184935567876 0.7001254396511821 0.6722038937028288 0.6556238141482783 0.7422084044475785 0.551086109959569 0.664720778725434 0.5455451202102202 0.8762405165179868 1.0 10.281750013695518 -10.93404244556151 1.191515638458908 1.000021293752123 0.6729191973855008 0.4307135498537813 0.11218857728381267 0.2978825159424595 0.7514145565841006 0.07951361594994717 0.018676002383117823 1.1640122596747583e-11 10.93404244556151 -0.32710209636662213 EIANS(ph)NER ddPTM_A549_PD325901_60min_R1 2 EIANSNER 8 0 Q01664 Q01664 TFAP4 Transcription factor AP-4 1 EIANS(1)NER;EIANS(1)NER 67.153 0.0081429 9379200.0 3065.3 2852.6000000000004 2580.3 2430.4 3643.3 2796.0 2907.3999999999996 2549.5 2998.7 3149.5 3346.1000000000004 True False 3376.486999445408 3092.9986132005724 2755.4146746043853 2580.520288161119 3387.407176702673 2773.2303030108446 3018.042697990326 2498.648222455941 2872.675067260152 2950.640032502968 2934.550912675535 1.150597518980151 1.0539938495667724 0.9389561662408423 0.879357818266089 1.1543187620535276 0.9450271559549775 1.0284512989548606 0.8514584673461446 0.9789147139522726 1.0054826514537327 1.0 11.518924022876936 EIAQDFK ddPTM_A549_MK2206_60min_R1 4 EIAQDFK 7 0 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;P68431;Q71DI3;Q16695 K7EK07;P68431 H3F3B;H3F3A;HIST1H3A;HIST2H3A;HIST3H3 Histone H3;Histone H3.3;Histone H3.1;Histone H3.2;Histone H3.1t 0 ;;; 130.27 0.015813999999999998 169436000.0 47114.9 49590.6 46102.1 43095.0 60842.8 47566.3 45875.0 48700.8 65705.3 65208.2 65161.5 False True 55066.74327128852 52114.54972142159 52640.07101208226 53653.27693460806 51892.904717969825 52599.73429404549 54209.89368438174 55604.28753994491 50823.15445980353 50477.62233093826 48980.10118408907 1.124267650332594 1.0639943254823394 1.074723606924318 1.0954096793911288 1.059469120386933 1.0739000741617952 1.1067738198546544 1.1352423983560016 1.0376286130726322 1.030574072136373 1.0 15.579908133803173 -8.964462263877579 4.8052169189897 1.0159057316506552 1.089323856263419 0.6286668502424062 0.02380969382302509 0.08991229033266411 4.430738688811009 0.0045398304791085045 0.0046992312539777 1.085269845319802e-09 8.964462263877579 0.07341812461276387 EIAQDFK ddPTM_A549_PD325901_60min_R1 2 EIAQDFK 7 0 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;P68431;Q71DI3;Q16695 K7EK07;P68431 H3F3B;H3F3A;HIST1H3A;HIST2H3A;HIST3H3 Histone H3;Histone H3.3;Histone H3.1;Histone H3.2;Histone H3.1t 0 ; 125.96 0.01645 308400000.0 14013.1 14678.9 15236.2 13949.6 18147.6 13573.900000000001 15786.3 14745.1 15127.7 15458.6 16138.2 False True 15435.699596101014 15915.94241860404 16270.220154713548 14811.23511015979 16872.97518182127 13463.3586588122 16387.05628509483 14450.997413192816 14491.935376993832 14482.541357818816 14153.303708478616 1.0906075298062157 1.1245390296450366 1.1495704811991552 1.0464860653903043 1.1921580663681668 0.9512520140966734 1.1578255241762438 1.0210335135065225 1.0239259804982745 1.0232622471842365 1.0 13.78885123031117 -8.046740153526681 0.5269350950152127 1.002908242514568 1.1212447698286727 0.290187646385354 0.061500750390195806 0.62498112836534 0.3731246140056108 0.01588169659205803 0.026463101316928434 8.979659035201107e-09 8.046740153526681 0.11833652731410482 EIAQDFKT(ph)DLR ddPTM_A549_MK2206_60min_R1 2 EIAQDFKTDLR 11 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;P68431;Q71DI3;Q16695 K7EK07;P68431 H3F3B;H3F3A;HIST1H3A;HIST2H3A;HIST3H3 Histone H3;Histone H3.3;Histone H3.1;Histone H3.2;Histone H3.1t 1 EIAQDFKT(1)DLR;EIAQDFKT(1)DLR 68.83 0.0015394999999999999 12888800.0 1966.9499999999998 2068.33 2012.8400000000001 2033.06 2474.5 2450.5 1874.8 1998.4 3076.1 3297.3999999999996 2891.3 True False 2298.923072689553 2173.5991624482845 2298.2909788482452 2531.1597912675315 2110.504327950329 2709.810283489748 2215.4268921957237 2281.679319843327 2379.368261522306 2552.515049856243 2173.3104141794875 1.0577978450250465 1.0001328610339844 1.0575070012333894 1.1646563577633924 0.9711011893103773 1.246858371362846 1.0193789519166028 1.0498635192454793 1.0948128928101666 1.1744825006141244 1.0 11.08567853419915 -10.86763966549439 0.9773400182845255 0.9974367121059262 1.0749523852717224 0.0 0.08950029788786648 0.9810956724314615 1.569915711069187 0.055799563712627794 0.011806751080205386 1.356314280761041e-11 10.86763966549439 0.07751567316579622 EIAQDFKT(ph)DLR ddPTM_A549_PD325901_60min_R1 2 EIAQDFKTDLR 11 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;P68431;Q71DI3;Q16695 K7EK07;P68431 H3F3B;H3F3A;HIST1H3A;HIST2H3A;HIST3H3 Histone H3;Histone H3.3;Histone H3.1;Histone H3.2;Histone H3.1t 1 EIAQDFKT(1)DLR;EIAQDFKT(1)DLR 85.90899999999999 0.00015347 30704000.0 2909.3999999999996 2540.1 3385.2 3256.3 3098.0 3246.3 3173.5 3471.3 3596.8 3704.3 3440.8 True False 3204.760146212922 2754.1631414817257 3614.940028861284 3457.434255406129 2880.407167519798 3219.863209107336 3294.2692791058344 3402.0621983178316 3445.6390042089256 3470.409865820209 3017.603413028295 1.0620216468395385 0.9126988422636374 1.1979506694796371 1.145755018859965 0.9545346996506692 1.0670266328589761 1.0916839717515738 1.127405338829371 1.1418462046180808 1.1500549909365005 1.0 11.559187497533562 -7.517479875644979 24.466454315130925 1.076013383975583 1.0548424332109716 0.029472242264899084 0.0839609775214956 1028.6615720611032 4661662.181804926 0.013696970975254035 0.020661349795554458 3.0375268417249626e-08 7.517479875644979 -0.021170950764611396 EIAQDFKTDLR ddPTM_A549_MK2206_60min_R1 2 EIAQDFKTDLR 11 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;P68431;Q71DI3;Q16695 K7EK07;P68431 H3F3B;H3F3A;HIST1H3A;HIST2H3A;HIST3H3 Histone H3;Histone H3.3;Histone H3.1;Histone H3.2;Histone H3.1t 0 ; 67.385 0.0047003 10765600.0 1936.81 2984.4 2654.6 2393.12 3748.5 2021.84 1542.9299999999998 1366.94 4305.9 4252.1 4554.9 False True 2263.696177541803 3136.2932125969564 3031.0621969210415 2979.4345074312387 3197.1006156079247 2235.7897668112273 1823.2604089905851 1560.7079310781808 3330.620525109359 3291.5476567882965 3423.792621155241 0.6611662644386437 0.9160289654280295 0.8852937465290506 0.8702146529032273 0.93378921253974 0.6530155340006654 0.532526531462466 0.4558418408389389 0.9727868751541253 0.9613747154106773 1.0 11.741379605124417 -8.953240588257351 24.99997506734938 0.9879947204444007 0.7482225678117939 0.3360570544769339 0.1494753685759258 105.82382319525966 56578.96850513389 0.02812301403310531 0.029930460243492753 1.1136774133003632e-09 8.953240588257351 -0.23977215263260687 EIAQDFKTDLR ddPTM_A549_PD325901_60min_R1 2 EIAQDFKTDLR 11 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;P68431;Q71DI3;Q16695 K7EK07;P68431 H3F3B;H3F3A;HIST1H3A;HIST2H3A;HIST3H3 Histone H3;Histone H3.3;Histone H3.1;Histone H3.2;Histone H3.1t 0 ; 104.24 0.00019945 18813800.0 4152.1 3847.6000000000004 4532.6 6203.7 4509.2 9734.2 6690.4 8498.3 7258.0 5967.1 6527.6 False True 4573.618135385535 4171.850755153375 4840.209492737991 6586.888459375053 4192.489347895505 9654.927902563726 6945.006833127356 8328.79473971262 6952.97150037489 5590.336287648344 5724.7465818656965 0.7989206281852553 0.7287398132816156 0.8454888654932504 1.15059913398444 0.7323449672298282 1.6865249429813507 1.2131553307751792 1.4548757085764772 1.2145466006128283 0.9765211800565767 1.0 12.482996115307886 -6.355932673081018 1.3300927718167037 1.167806769748766 0.751519349757879 0.3593749154562125 0.2344749832698724 0.43267786256963386 1.416131540840139 0.03545737983134404 0.13887113363445308 4.406231662414154e-07 6.355932673081018 -0.4162874199908869 EIAQEFKTDLR ddPTM_A549_MK2206_60min_R1 2 EIAQEFKTDLR 11 1 Q5TEC6;A0A590UJL8 Q5TEC6 HIST2H3PS2 Histone H3 0 ; 91.31299999999999 0.00029972 29131000.0 7371.0 7216.5 7148.299999999999 6890.200000000001 9538.2 7049.9 6992.1 7452.3 9786.400000000001 10394.4 9572.5 False True 8615.044596352061 7583.789025836323 8162.036428181528 8578.299309312832 8135.143415177142 7795.915738655125 8262.474062791622 8508.686346711575 7569.796025669489 8046.297820775678 7195.384062440131 1.1973015646687368 1.0539797403482136 1.1343434009016027 1.192194778606956 1.1306058640625662 1.083460684100209 1.1483020212807953 1.1825201091248034 1.05203502133872 1.1182582821085691 1.0 12.812855979298268 -8.937936943209515 4.124296095715906 1.0217741717692095 1.1369134152675326 0.29525920552106943 0.05116774469774861 0.10701378563039429 3.4486678142766696 0.0076987521065938844 0.008010191973388892 1.1536207440404387e-09 8.937936943209515 0.11513924349832316 EIAQEFKTDLR ddPTM_A549_PD325901_60min_R1 2 EIAQEFKTDLR 11 1 Q5TEC6;A0A590UJL8 Q5TEC6 HIST2H3PS2 Histone H3 0 ; 78.705 0.0010398 59891000.0 7648.5 8863.5 8511.6 8725.1 11469.3 10150.1 8755.7 9829.0 9531.6 9227.8 10154.3 False True 8424.97008947189 9610.458251455957 9089.248360408747 9264.029610860181 10663.735934936989 10067.440950854932 9088.902954802887 9632.952884298662 9131.019999031863 8645.155133173805 8905.385473411181 0.9460533869787369 1.0791737516753106 1.020646258103765 1.0402727246922443 1.1974479899579549 1.1304890710136357 1.0206074719549911 1.0816997100304955 1.025336862317118 0.9707783182418833 1.0 13.120462345011168 -8.989918287031607 1.5096364599667784 1.0081130695011302 1.0687396300280079 0.17227052451924207 0.06252733421313346 0.5071861560713525 2.3341908279604495 0.012899847732370328 0.012672603524075761 1.0234855440587798e-09 8.989918287031607 0.06062656052687765 EIATVVK ddPTM_A549_MK2206_60min_R1 1 EIATVVK 7 0 P00505-2;P00505 P00505-2 GOT2 Aspartate aminotransferase, mitochondrial 0 127.84 0.015995 2038000.0 1128.4 1100.4 1329.6 938.3 1366.1 849.99 1127.5 875.34 1587.5 1206.3 1485.8 False True 1318.8463332687115 1156.4056598115835 1518.1572730453615 1168.183542121888 1165.1484996617269 939.9353776223016 1332.3521554036058 999.4221256163215 1227.933784716577 933.7959921882651 1116.8348540061158 1.1808785592050384 1.0354312060225612 1.3593390890333443 1.045976974958816 1.0432594357906262 0.8416064149956718 1.1929715039107383 0.8948701072780529 1.0994765970205411 0.8361092858435735 1.0 10.12520015542432 -6.483512526869371 24.982131926628472 1.0319885972999259 1.1806412001101543 0.2925577302375538 0.12722739949858708 515.2725742255093 326995.8318755067 0.014573709133567883 0.03386095658398807 3.284637698974462e-07 6.483512526869371 0.1486526028102284 EIATVVK ddPTM_A549_PD325901_60min_R1 1 EIATVVK 7 0 P00505-2;P00505 P00505-2 GOT2 Aspartate aminotransferase, mitochondrial 0 89.55 0.035019 3267600.0 1218.8 1603.7 1520.8 1386.3 2007.7 1989.7 1522.9 1749.2 1769.6 1503.2 1999.0 False True 1342.5316787668621 1738.8494271856396 1624.0106333133174 1471.9286024842652 1866.6860781889923 1973.4965428829335 1580.8547928628568 1714.3108337791464 1695.2298659497653 1408.287695462283 1753.1356727050568 0.7657888089718464 0.9918510325573526 0.9263462369729196 0.8395976565881554 1.0647698904607477 1.1256952748202675 0.901729864650821 0.9778540591407826 0.9669701508805968 0.8032964689431711 1.0 10.775721933220902 -4.5169962072294805 1.2102831555739209 0.9834343399844037 2.7534328177466858e-74 0.22381594731757115 0.09171781914757142 6.026230642560061 1.9629588169944603 0.010484111953350651 11.552346319637826 3.0409115823789795e-05 4.5169962072294805 -0.9834343399844037 EIDCLS(ph)PEAQK ddPTM_A549_MK2206_60min_R1 2 EIDCLSPEAQK 11 0 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-3 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 EIDCLS(1)PEAQK;EIDCLS(1)PEAQK 191.23 3.9433000000000003e-19 28744000.0 10874.8 12652.2 10174.1 10306.599999999999 14333.5 13363.4 11211.3 11626.0 16993.8 16598.0 15123.7 True False 12710.200376666584 13296.142938084444 11616.940366795141 12831.71746268085 12225.061137472638 14777.506118092997 13248.248088582211 13274.02110313176 13144.73143352225 12848.500272188354 11368.067897114217 1.1180616171278381 1.1696044621144168 1.0218922399068446 1.1287509521242551 1.075386006497724 1.2999136046543376 1.1653913583631286 1.1676584995152404 1.1562854437963939 1.130227263636413 1.0 13.472699455933267 -10.627407863670129 0.8902813761911459 0.9994602676312806 1.1450592947149723 0.053003218850118605 0.0751008585321592 0.485679295586779 0.6825214875805851 0.04552778206737577 0.012138685294557113 2.3582624523761468e-11 10.627407863670129 0.14559902708369166 EIDCLS(ph)PEAQK ddPTM_A549_PD325901_60min_R1 2 EIDCLSPEAQK 11 0 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-3 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 EIDCLS(1)PEAQK;EIDCLS(1)PEAQK 188.96 6.834899999999998e-19 53527000.0 18444.7 18938.2 20801.6 17724.5 18816.1 18617.4 19014.1 19811.7 16302.7 17460.4 19753.9 True False 20317.192365729512 20534.188577618694 22213.32166618247 18819.302109739867 17494.522048021063 18465.786066979297 19737.691980414744 19416.540101522016 15617.554213166386 16357.947364189493 17324.295530289353 1.172757202750753 1.1852827459400728 1.2822063458421884 1.0862953750030806 1.0098258839693706 1.0658895788688314 1.1393070469102695 1.1207693881447955 0.9014827867523418 0.9442200599493167 1.0 14.08050906780679 -7.23714074276749 0.48076622413859943 0.9563921962325259 1.2249639183007945 0.537533915045987 0.07322955420479377 0.6850023614401384 0.2852982468332878 0.02235256008054027 0.07687147879502464 5.792409501187539e-08 7.23714074276749 0.2685717220682686 EIDDT(ph)YIEDAADVDAR ddPTM_A549_PD325901_60min_R1 1 EIDDTYIEDAADVDAR 16 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 EIDDT(1)YIEDAADVDAR 82.102 0.00022872 784200.0 249.87 243.66 353.2 341.95 0.0 264.19 339.49 329.77 227.64 276.51 241.25 True False 275.23661845542813 264.1940833248445 377.1702759641396 363.0714748752035 0.0 262.03852423191546 352.40947772605625 323.1924786504396 218.07308243942398 259.05111141050816 211.5777794097523 1.3008767708181248 1.2486853962730782 1.7826554235343042 1.7160189311376635 0.0 1.238497374171029 1.6656261291199304 1.5275350726908263 1.030699362890526 1.2243776833899773 1.0 7.725044308631717 -4.726406682908515 0.08110881687676297 0.6679061354949075 2.161027371620147 0.0003417504589428022 0.46965054687916047 183.35144964196581 1.9193504868321427 8.438031287850302 34.20412362418214 1.8775578069022513e-05 4.726406682908515 1.4931212361252393 EIDGGLETLR ddPTM_A549_MK2206_60min_R1 2 EIDGGLETLR 10 0 P38117-2;P38117;M0QY67 P38117-2 ETFB Electron transfer flavoprotein subunit beta 0 ; 96.331 0.0014918 3850400.0 742.9100000000001 920.47 896.23 961.78 1233.51 1180.7 829.22 979.19 1120.76 1166.03 1501.8200000000002 False True 868.295045594345 967.3179913547509 1023.3288905095101 1197.4161431759446 1052.0623130208169 1305.6408903147715 979.8785404024637 1117.9931811436088 866.9096494859529 902.6230131569945 1128.876645876609 0.7691673388460313 0.8568854665281851 0.9065019586040441 1.0607147800866343 0.9319550695495669 1.156584198179509 0.8680120578112913 0.9903590310130397 0.7679401045742864 0.7995763013203969 1.0 10.140672133833364 -5.47446113324282 2.379416755431002 0.9261958733113946 0.7644272212611504 0.18741832969597905 0.10683036876323879 0.5914719528728647 5.351335490799832 0.01646877780315924 0.16106234305975645 3.3538131772844902e-06 5.47446113324282 -0.16176865205024427 EIDGGLETLR ddPTM_A549_PD325901_60min_R1 2 EIDGGLETLR 10 0 P38117-2;P38117;M0QY67 P38117-2 ETFB Electron transfer flavoprotein subunit beta 0 ; 130.96 3.2265e-06 4566500.0 3035.8 2435.3999999999996 2610.0 2703.1000000000004 3249.3999999999996 2445.7 3014.3 2776.0 2883.3999999999996 2714.1000000000004 2793.9 False True 3343.992181162157 2640.6397050370424 2787.1302952049946 2870.0643478144857 3021.1733538214426 2425.783030069249 3129.0108359882524 2720.630502270128 2762.220725293601 2542.731262808796 2450.268011991324 1.364745474697891 1.0776942326774304 1.1374797701986503 1.1713267013113373 1.2329971003319535 0.9900072229640805 1.277007584752052 1.1103399664672118 1.1273137108984066 1.0377359743362635 1.0 11.258723845491348 -14.999999995027556 0.12361104853386909 0.4415989618641531 1.2386180816648102 0.30777677808127957 0.09264075631051884 63.526522787483216 0.5435106961515318 8.75227367287512 0.2953131867138278 1.000000011449475e-15 14.999999995027556 0.7970191198006571 EIDLLLGQTDDTR ddPTM_A549_PD325901_60min_R1 1 EIDLLLGQTDDTR 13 0 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 62.303000000000004 0.019708 574590.0 606.42 645.22 723.39 802.91 792.35 539.15 805.96 931.34 517.31 548.91 720.77 False True 667.9833119771907 699.594953799787 772.4835954974486 852.5039271590867 736.6980694591064 534.7593411546129 836.6312488382347 912.7636930779041 495.5692596939838 514.2517289224334 632.1198593374806 1.0567352094859008 1.1067441458539626 1.2220524068126606 1.3486428476596017 1.165440475531386 0.8459777576282599 1.3235326124939353 1.4439724991943204 0.7839798930117234 0.8135351568631559 1.0 9.304054330576792 -8.780746568270187 24.99923996482689 0.897990499675236 1.1850561891852711 0.4428501383129845 0.16035132738520105 184.9433100425046 239466.36819227107 0.029554076900227825 0.03148547971768852 1.6567364668972976e-09 8.780746568270187 0.2870656895100351 EIDLVNRDPK ddPTM_A549_PD325901_60min_R1 1 EIDLVNRDPK 10 1 C9JKI3;Q03135-2;P56539;Q03135;E9PCT5 C9JKI3;Q03135 CAV1;CAV3 Caveolin;Caveolin-1;Caveolin-3 0 44.765 0.053766999999999995 6679300.0 1923.3 1934.4 1825.9 1715.6 2394.0 1964.1 1817.2 2156.5 2117.9 2186.9 2323.1 False True 2118.552000141374 2097.4186767773913 1949.8165540286589 1821.5687155897047 2225.853698851646 1948.1050207952787 1886.3545404099962 2113.486915758478 2028.892028195642 2048.818760781311 2037.37342734423 1.0398447195333071 1.029471891911063 0.9570246317437722 0.8940769969519861 1.0925114016791242 0.9561845632465547 0.9258756961746128 1.0373586341083598 0.995837091504799 1.005617690543849 1.0 10.992494718771495 EIDTDST(ph)SQGESK ddPTM_A549_MK2206_60min_R1 1 EIDTDSTSQGESK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 EIDTDS(0.067)T(0.519)S(0.33)QGES(0.083)K 74.46 0.0026894 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EIEIDIEPTDKVER ddPTM_A549_MK2206_60min_R1 1 EIEIDIEPTDKVER 14 1 F8VSA6;E9PS38;S4R3E9;E9PL57;Q15843 F8VSA6 NEDD8;NEDD8-MDP1 NEDD8 0 86.46700000000001 0.00010554 4436600.0 1224.6 1432.5 1450.9 1526.2 1802.3 1446.6 1362.3 1533.7 2162.0 1731.9 1658.5 False True 1431.282541404523 1505.4081312977949 1656.6594370197934 1900.1190685137203 1537.1840574923726 1599.678251824635 1609.8122761031761 1751.1066717592614 1672.3104520045597 1340.662587143211 1246.6486777285927 1.1481041667748249 1.207564054085121 1.3288903815614233 1.5241816740027814 1.233053132734347 1.2831828889749965 1.2913119027537665 1.4046512887253821 1.341444852812524 1.0754133149893623 1.0 10.283839236348767 -10.673337160854453 0.8758783488938461 0.9944149812632564 1.3110385419183153 0.5241628005486927 0.09782762068057639 0.3568372767713152 0.4741839720513204 0.07354288003710571 0.01821266032683948 2.1215967387686054e-11 10.673337160854453 0.3166235606550588 EIEIDIEPTDKVER ddPTM_A549_PD325901_60min_R1 2 EIEIDIEPTDKVER 14 1 F8VSA6;E9PS38;S4R3E9;E9PL57;Q15843 F8VSA6 NEDD8;NEDD8-MDP1 NEDD8 0 ; 141.85 6.257600000000001e-13 9201400.0 2764.6000000000004 3725.2999999999997 3509.3999999999996 3839.8 3807.4 4052.1 3986.1 4052.6 3509.3 3919.2 4084.6000000000004 False True 3045.260156809048 4039.2441049414874 3747.568987736554 4076.9757251814813 3539.981358816939 4019.101041069471 4137.793216777617 3971.7677137968044 3361.816324919479 3671.7410431451412 3582.220094412745 0.8501041467437461 1.1275812201605289 1.0461582172412318 1.1381142469555168 0.9882087826871145 1.1219581530844902 1.1550918446444456 1.108744747423991 0.9384728565849335 1.0249903541303964 1.0 11.806638265024201 -8.762612484432369 24.999582660767537 0.9709455133279774 1.0728332201272879 0.1355579531271892 0.08529570062992929 31.933333378592902 680512.6900877896 0.013694132808900932 0.014979893260393876 1.7273785229286064e-09 8.762612484432369 0.10188770679931047 EIEMSVDDDDINS(ph)SK ddPTM_A549_MK2206_60min_R1 1 EIEMSVDDDDINSSK 15 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 EIEMSVDDDDINS(0.5)S(0.5)K 125.28 5.8095e-08 3611200.0 1094.7 1388.7 783.1 997.79 1737.4 1362.0 1717.2 1489.8 2071.0 1818.7 1819.9 True False 1279.4585971546062 1459.3788983827205 894.1553553864493 1242.2485947924945 1481.8307615198632 1506.1259359775718 2029.193012203167 1700.9837123211505 1601.9218067074212 1407.8544068579931 1367.968603315204 0.9352982181417774 1.066821924747387 0.6536373373040201 0.9080972997347795 1.0832344820843987 1.1009945201428968 1.4833622696350768 1.2434376843144652 1.1710223486308406 1.02915695831478 1.0 10.417819403510714 -6.802766640896104 3.776368672697238 1.129522237175201 0.8841295617208457 0.41054159569605564 0.1528114792723398 0.21215672846308822 6.319084941560916 0.024382208403166617 0.049392997753071 1.574828838673031e-07 6.802766640896104 -0.24539267545435528 EIEMSVDDDDINS(ph)SK ddPTM_A549_PD325901_60min_R1 1 EIEMSVDDDDINSSK 15 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 EIEMSVDDDDINS(0.887)S(0.113)K 132.65 7.4401e-10 7196700.0 2070.8 2260.6 2171.0 1931.9 2398.9 1975.1 2616.3 2157.1 2476.4 2202.5 2700.5 True False 2281.0260915576123 2451.1086955763885 2318.337115283542 2051.2290753367615 2230.409539755727 1959.015440442317 2715.864728194293 2114.0749482877873 2372.3255199129753 2063.433774118999 2368.3556198799433 0.9631265137763568 1.0349411528411598 0.9788804923650204 0.8660984263168816 0.9417544903449893 0.827162704789082 1.146730121691761 0.8926340835566552 1.0016762263233228 0.8712516637275944 1.0 11.209670009428265 -7.740029329090734 24.999613923030047 1.0009295724647564 0.9389803336581479 0.051297629388435184 0.08475083374382147 360.33615710798745 420748.3546591128 0.010882574977926256 0.01613276340873363 1.819577973397901e-08 7.740029329090734 -0.06194923880660852 EIEMSVDDDDINSS(ph)K ddPTM_A549_MK2206_60min_R1 1 EIEMSVDDDDINSSK 15 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 EIEMSVDDDDINS(0.305)S(0.695)K 180.48 4.6535e-29 3463800.0 1021.6 1239.1 1256.7 1139.3 1826.6 1667.2 1213.0 1454.9 2264.6 1815.7 1848.6 True False 1194.021104278018 1302.1648973759834 1434.9189568562767 1418.428551145121 1557.9095596823881 1843.621997402207 1433.3863986736785 1661.1365304443834 1751.6717158230922 1405.5321089415831 1389.5416012355006 0.8592913686185163 0.9371183246461805 1.032656349101336 1.0207888341622415 1.1211679868362232 1.3267843120083371 1.0315534255319838 1.1954564936864043 1.2606112075130433 1.011507757444516 1.0 10.44039331243389 -5.914369091260057 1.0725726784056422 1.1380530198635672 0.8479612319178895 0.45353686912132085 0.09873496629558162 0.6036461847377145 1.002218415314429 0.017351395232319395 0.15234050246908776 1.2179540636021391e-06 5.914369091260057 -0.2900917879456777 EIEQEAAVELSQLRDPQHDLDR ddPTM_A549_PD325901_60min_R1 1 EIEQEAAVELSQLRDPQHDLDR 22 1 P47985 P47985 UQCRFS1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 0 113.99 2.6279000000000003e-14 1798700.0 0.0 0.0 0.0 200.85 185.91 0.0 120.48 165.74 0.0 0.0 213.97 False True 0.0 0.0 0.0 213.25604833655404 172.85232295468228 0.0 125.06493232918571 162.43418567948535 0.0 0.0 187.6530464675843 0.0 0.0 0.0 1.1364379760996446 0.9211271876928535 0.0 0.6664689685748841 0.8656091054058357 0.0 0.0 1.0 7.551923901731558 -11.068843706654965 1.3773511963878042 1.0006418127117813 0.3704825783892299 0.0 0.5090141515640498 0.5477052886149241 1.8512846606981903 0.3183133433852406 0.07004097990475845 8.534071818504e-12 11.068843706654965 -0.6301592343225515 EIES(ph)SPQYR ddPTM_A549_MK2206_60min_R1 1 EIESSPQYR 9 0 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.812)S(0.188)PQYR 140.16 4.1438999999999994e-05 123210000.0 2185.1 2446.2 2135.7 1969.6 3210.8 2570.3 2219.4 2079.4 3171.6 3482.4 3438.6 True False 2553.89145943412 2570.7011314350193 2438.5743742802197 2452.152088418702 2738.495573321042 2842.287439972944 2622.636251621076 2374.161317895423 2453.2376640044686 2695.7234213681622 2584.7007194679186 0.9880801441336152 0.9945836715533622 0.9434648877964563 0.9487179966133554 1.0595019967668764 1.0996582384045035 1.0146769534543894 0.9185439923521062 0.949137997109966 1.0429537938624858 1.0 11.335781526310345 -3.747976178153417 2.0554699532859773 0.9845778532895243 2.84538991112643 0.0 0.05401949158275796 15053.980041707006 201.78319602101038 0.007792761720312165 131175.26593969864 0.00017865855696502856 3.747976178153417 1.8608120578369056 EIESEIDS(ph)EEELINK ddPTM_A549_MK2206_60min_R1 2 EIESEIDSEEELINK 15 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK 95.65100000000001 1.9065e-05 12930500.0 1077.6599999999999 1181.02 1346.41 1082.6799999999998 1595.78 1465.21 1233.1100000000001 1542.96 1840.67 1927.0 2113.44 True False 1259.5426617426087 1241.1288734557227 1537.351183815438 1347.9366486033514 1361.042875916984 1620.2575496723177 1457.1501253656238 1761.6793051168222 1423.7611839459914 1491.6893616403768 1588.6145200233452 0.7928560678924799 0.7812649688216899 0.967730789589438 0.8484982553121465 0.8567483544698956 1.0199186330290544 0.9172458812375771 1.108940704564965 0.8962282328409467 0.9389876164662374 1.0 10.63355337944407 -7.235469706871023 19.91983258315356 0.9645126816492696 0.8521546802114085 0.4522683456707962 0.0704989075909732 52.41499197348663 40203.49624807716 0.010724971236875526 0.018563064099651163 5.8147399016261136e-08 7.235469706871023 -0.11235800143786112 EIESEIDS(ph)EEELINK ddPTM_A549_PD325901_60min_R1 3 EIESEIDSEEELINK 15 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK;EIES(0.002)EIDS(0.998)EEELINK 287.85 2.4299999999999993e-107 31696700.0 8265.84 8656.490000000002 8765.82 8073.1 11808.94 8725.64 9305.650000000001 10106.680000000002 9709.08 10387.91 10447.4 True False 9104.98199181021 9386.002792254298 9360.721258357793 8571.757051659613 10979.52079303139 8654.581280816717 9659.781602997075 9905.094338862924 9301.041131835187 9732.015589788192 9162.436031525172 0.9937293925417563 1.0244003625193017 1.021641103539537 0.935532539836217 1.198318957453474 0.94457208225399 1.0542809324682525 1.0810546785573716 1.015127538116841 1.0621646422745292 1.0 13.1615155056222 -5.254942361262928 21.878392522645406 1.020110905034361 0.9937293366726807 0.0 0.06856847830431026 630.4637135003273 2122681.862116425 0.008230396699959917 0.10006960157938345 5.559780407215014e-06 5.254942361262928 -0.026381568361680374 EIESEIDS(ph)EEELINKK ddPTM_A549_PD325901_60min_R1 2 EIESEIDSEEELINKK 16 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 EIESEIDS(1)EEELINKK;EIESEIDS(1)EEELINKK 146.58 8.0825e-15 10630500.0 3113.8999999999996 3568.3999999999996 3900.5 3528.7 3972.1 3674.6000000000004 4106.9 4054.6 3444.8999999999996 3714.0 4120.5 True False 3430.020835667977 3869.1215913008887 4165.211385611909 3746.659784740844 3693.1133990010935 3644.6752759097485 4263.1903268819115 3973.7278222278346 3300.1228329624473 3479.4974061647968 3613.704622001593 0.9491702268040171 1.0706800903826563 1.1526153411245996 1.0367919286844225 1.0219743408235498 1.0085703335351746 1.1797284982635285 1.0996271798293322 0.9132242886898 0.9628615977576882 1.0 11.819262872273287 -8.757010432891006 24.999608763197568 0.9590225795704153 1.067594482066705 0.35212120815398185 0.0640793090382676 91.75415547015598 517913.595263292 0.011578067711642681 0.012907376400445921 1.7498046532287127e-09 8.757010432891006 0.10857190249628967 EIESS(ph)PQYR ddPTM_A549_MK2206_60min_R1 1 EIESSPQYR 9 0 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.266)S(0.734)PQYR 101.97 0.00071147 112860000.0 909.08 879.82 861.22 1020.3 1113.6 1084.5 991.9 1044.4 1231.4 1347.8 1567.9 True False 1062.5104791278982 924.5990799849401 983.3539460680853 1270.2735458030077 949.7909151769994 1199.261070167162 1172.1153906384352 1192.4468983408572 952.4898661417282 1043.3310439122472 1178.547158161388 0.9015426084311171 0.7845244660615669 0.8343781063476347 1.0778300528802927 0.8058997967113479 1.0175758024295685 0.9945426303237734 1.0117939618140979 0.8081898628712284 0.8852688131206502 1.0 10.20279377212958 -6.096597874786068 23.918377989367524 0.9312478499083717 0.8344929667175102 0.21794972443355587 0.08744969691605292 43.94233162535175 10873.3916761812 0.013410511200202115 0.03548090816465356 8.005751865291803e-07 6.096597874786068 -0.09675488319086156 EIESS(ph)PQYR ddPTM_A549_PD325901_60min_R1 2 EIESSPQYR 9 0 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.381)S(0.619)PQYR;EIES(0.242)S(0.758)PQYR 133.23 4.719899999999999e-05 316210000.0 4864.0 4720.9 4276.7 4209.8 4912.1 5223.7 4730.2 4946.7 4664.3 4879.1 5255.5 True False 5357.789699312451 5118.746810999993 4566.942579886284 4469.829784850508 4567.091041825049 5181.159919112218 4910.210349464761 4848.03418788892 4468.275691540173 4571.032793327583 4609.106817359392 1.1624355675883398 1.1105723980449165 0.9908519721620892 0.9697822076970919 0.9908841827279641 1.1241136568148709 1.065327957028749 1.051838106600101 0.9694450288527046 0.9917393921337623 1.0 12.170271487591357 -5.6389472185805625 3.7570890760826736 1.003819173734087 1.152544626667381 0.4897152099207178 0.04643365193701421 0.13420679338219918 3.448429225880619 0.007210039487676853 0.033223843808206616 2.296427724533576e-06 5.6389472185805625 0.14872545293329398 EIEVGGGRK ddPTM_A549_PD325901_60min_R1 1 EIEVGGGRK 9 1 P62081;B5MCP9 P62081 RPS7 40S ribosomal protein S7 0 85.73100000000001 0.0012627 6282500.0 4354.0 4579.7 4395.7 4677.7 4336.1 5308.2 3898.4 5399.4 4711.0 4561.3 4301.8 False True 4796.01487475461 4965.6473914585495 4694.018635491416 4966.630905172508 4031.547294732923 5264.971779128102 4046.755745286332 5291.704731252638 4513.0130529437965 4273.29873956367 3772.7058713569863 1.2712400696716797 1.3162031604845144 1.2442047685533055 1.316463852345342 1.068608959246228 1.3955426048716513 1.0726401376820753 1.4026284877992068 1.1962271130668696 1.1326880189646558 1.0 11.881383913441066 -10.179361018430471 0.57061937761517 0.9861174704830841 1.2620720642385554 0.2679535718096314 0.11160442807851184 0.5812191413310401 0.34534910425769033 0.0771984944072681 0.022712560128618543 6.616662479818136e-11 10.179361018430471 0.2759545937554714 EIEYVET(ph)VTSR ddPTM_A549_MK2206_60min_R1 2 EIEYVETVTSR 11 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 EIEYVET(1)VTSR;EIEYVET(0.815)VT(0.154)S(0.031)R 125.54 3.1118e-06 5082100.0 1272.8 1310.0500000000002 1238.95 1397.73 1884.29 1526.6799999999998 1125.44 1470.96 2053.63 2448.6000000000004 2236.9 True False 1487.6175230276635 1376.725949324033 1414.6517399515285 1740.1739127464848 1607.1134371038686 1688.2322642718332 1329.917880068678 1679.4730846260702 1588.4860839732307 1895.4595593734446 1681.415994700688 0.8847409134421117 0.8187896116505698 0.8413454757240806 1.0349454972659853 0.9558095332558995 1.0040538864817676 0.7909511294410038 0.9988444798427389 0.9447311605097465 1.1272995887676558 1.0 10.715460986775964 -2.0000000000000004 0.20919381335246715 0.9868576391124129 0.2710210182053328 0.2777237101943697 0.08298678982352986 48.19252157501176 0.547264285307013 0.04931137924585543 11.619505089905571 0.00999999999999999 2.0000000000000004 -0.7158366209070801 EIEYVET(ph)VTSR ddPTM_A549_PD325901_60min_R1 2 EIEYVETVTSR 11 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 EIEYVET(1)VTSR;EIEYVET(0.997)VT(0.001)S(0.002)R 110.98 7.8056e-05 6119300.0 2483.94 2116.2200000000003 1663.26 2078.3 2490.3 2462.4 1959.74 2038.3899999999999 2383.6 2214.7 2153.1800000000003 True False 2736.1077602200194 2294.561286274737 1776.138825594888 2206.67187083824 2315.3899190686107 2442.347030806118 2034.3189781108752 1997.732712363979 2283.425581192283 2074.863464036934 1888.3525101326045 1.4489390860755567 1.2151127895678797 0.9405758808614412 1.1685698824756414 1.2261428449638456 1.2933745249898339 1.0772983154337112 1.0579236141792687 1.2092157417324245 1.0987691402444941 1.0 10.882912391072015 -14.999999999999996 0.23114881191428627 0.00452367600553217 1.2021255794482977 0.14534113537259186 0.12647728029116403 52.25638389517892 0.655250870102242 23.783189745488155 0.07665310196072037 1.0000000000000082e-15 14.999999999999996 1.1976019034427654 EIFSGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 EIFSGSLR 8 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 EIFS(0.076)GS(0.924)LR;EIFS(0.087)GS(0.913)LR 76.827 0.004580699999999999 4131800.0 769.6700000000001 981.48 813.4000000000001 845.41 1221.17 912.6800000000001 837.02 876.4100000000001 885.1600000000001 1102.62 1244.3200000000002 True False 847.8063317988926 1064.1927641043599 868.6022153715494 897.6290556345836 1135.3992320077955 905.2474366780893 868.8732541349186 858.9293150196551 847.9598034268165 1033.0003850256937 1091.276528394376 0.776894132458152 0.9751815753520647 0.7959506071752013 0.8225495850765606 1.040432193367467 0.8295307496533475 0.7961989757200356 0.7870867673507286 0.7770347674154067 0.9465981885870618 1.0 10.091801010148247 -10.945733644932657 1.230847649688093 0.9992373806049805 0.8420471769238711 0.2581894158629541 0.08287084204547249 0.4367489264760433 1.1852653373959128 0.05697759306906944 0.013589935840952763 1.13309508329125e-11 10.945733644932657 -0.15719020368110936 EIGQS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 EIGQSPSR 8 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 EIGQS(0.622)PS(0.378)R 79.311 0.0041183999999999995 8242200.0 1754.0 1764.3 1400.1 1393.8 2200.4 1839.0 1687.4 1737.1 2031.8 2233.1 2310.1 True False 2050.0323188171906 1854.0953340654103 1598.6552331459163 1735.2810625700604 1876.7240748522538 2033.6017593705965 1993.9787379406148 1983.3392446456364 1571.600544117885 1728.6411590446946 1736.438414483462 1.1805960417127797 1.0677576115574174 0.920651846798418 0.9993334909526601 1.080789309427091 1.1711338233527455 1.1483152649175659 1.1421880719193949 0.9050712832711597 0.9955096274225844 1.0 10.761915528843153 -8.76362076307125 24.997006352776868 0.9551725489018347 1.084009258749985 0.3299590168190929 0.0767028471333251 49.91317486824022 571965.5552974318 0.014749172699121915 0.016077058282369123 1.7233728108598093e-09 8.76362076307125 0.12883670984815032 EIGQS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 EIGQSPSR 8 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 EIGQS(0.98)PS(0.02)R 74.84899999999999 0.0049489 13126000.0 2066.5 1861.0 2062.3 1842.7 2451.8 2166.6 2400.8 2232.2 2284.0 2217.3 2062.1 True False 2276.289558723105 2017.8330011800672 2202.260079617342 1956.5193939246617 2279.5940262508207 2148.9559279339414 2492.1637577681704 2187.6770198729746 2188.011422823953 2077.2992995932136 1808.4747727289127 1.2586791881471917 1.1157650809445585 1.2177444290772292 1.0818615904563356 1.2605064005460296 1.1882697842067529 1.378047288991264 1.2096806949492922 1.2098656037774502 1.1486470980508376 1.0 10.820557757959762 -10.505081820118097 0.8149454657022738 0.9994260424224541 1.211827813439312 0.22682051604521603 0.08449806238531338 0.3894643321222108 0.4634085679242519 0.04940233309786885 0.013985958686164772 3.1254904761724585e-11 10.505081820118097 0.21240177101685775 EIGQS(ph)PSRK ddPTM_A549_MK2206_60min_R1 2 EIGQSPSRK 9 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 EIGQS(0.992)PS(0.008)RK;EIGQS(0.984)PS(0.016)RK 72.34 0.0011270999999999998 24909200.0 5435.700000000001 6158.2 5810.5 5377.9 7312.3 5813.7 5068.7 5600.3 8946.7 7675.1 8877.2 True False 6353.113269894302 6471.6260762011 6634.516271833695 6695.485741423101 6236.670356545238 6428.901875178268 5989.617179684486 6394.159675199448 6920.286734944123 5941.289579411546 6672.746241743908 0.952098737121154 0.9698594614186548 0.9942707292432236 1.0034078172397651 0.9346482138837183 0.9634566702027152 0.8976240010768207 0.9582500882767495 1.0370972436583352 0.8903814657664552 1.0 12.704064925222339 -8.750052211126375 24.98084965438506 1.0175181424890756 0.9594704601523297 0.0 0.04730586547828578 147.98859361123877 324653.08620951104 0.005169856927285715 0.005836745924027481 1.7780656371403418e-09 8.750052211126375 -0.05804768233674584 EIGQS(ph)PSRK ddPTM_A549_PD325901_60min_R1 2 EIGQSPSRK 9 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 EIGQS(0.998)PS(0.002)RK;EIGQS(0.841)PS(0.159)RK 76.942 0.00081661 46872000.0 12421.4 11656.3 12748.599999999999 11401.7 14186.6 12608.0 11802.2 11814.8 13095.9 12215.2 12277.0 True False 13682.411383848617 12638.61730878841 13613.79665955954 12105.957113860528 13190.182157113091 12505.324628169072 12251.339179411641 11579.144545468707 12545.524865218998 11443.930187340933 10767.006830315155 1.270772053875267 1.1738282986134665 1.2643993706058658 1.1243567785037043 1.2250556134110866 1.1614485646056785 1.1378593301266662 1.0754283644426537 1.1651822147912378 1.0628701520946249 1.0 13.394329623746547 -14.999999999955026 0.10871233145337277 0.41745478540295267 1.2889263337922465 0.6652644306668689 0.04637764936736284 35.41505037143723 0.27322548074934006 4.630139099397734 0.22605320581002888 1.000000000103556e-15 14.999999999955026 0.8714715483892939 EIIDLVLDR ddPTM_A549_MK2206_60min_R1 2 EIIDLVLDR 9 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VS66;F8VRZ4;Q71U36-2;Q71U36;P68363 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain 0 ; 144.5 9.3429e-05 31142000.0 15344.6 15125.3 16869.0 17004.2 22779.7 17988.300000000003 17587.4 18864.3 23715.0 20017.5 17003.1 False True 17934.393340548624 15895.11316462027 19261.277857251964 21170.229763347546 19428.836306086127 19891.809966332847 20782.802925006992 21538.372294495835 18343.590365073152 15495.532847242468 12780.761008312953 1.4032336047034766 1.2436750170261113 1.507052502172907 1.6564138668720787 1.520162711238328 1.5563869751883064 1.626100582859604 1.685218296507281 1.4352502447344087 1.2124108131873959 1.0 13.641686121173336 -10.19221057963747 0.7935120976418792 1.01882643919008 1.5202605670278144 0.5737758253624268 0.13224943210985549 0.2657602469986365 0.32516500409148874 0.0709686906192577 0.027109784173544513 6.423761680191655e-11 10.19221057963747 0.5014341278377343 EIIDLVLDR ddPTM_A549_PD325901_60min_R1 2 EIIDLVLDR 9 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VS66;F8VRZ4;Q71U36-2;Q71U36;P68363 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain 0 ; 169.44 5.5017e-07 73171000.0 14377.3 14100.6 15403.7 16245.2 20301.2 18113.5 16958.0 16830.6 17311.3 15384.6 15414.199999999999 False True 15836.872911991137 15288.907048059998 16449.087711972872 17248.629108473917 18875.31374733792 17965.98966151178 17603.345969773658 16494.900479649732 16583.766262667363 14413.213730447742 13518.351118664474 1.171509215360262 1.1309742522481872 1.2167968983482016 1.2759417888368896 1.396273375476778 1.3290074731604327 1.3021814432286143 1.2201858299771196 1.2267595446437651 1.066196136195024 1.0 13.722631571258509 -10.325171872238606 0.6735793860577466 0.9949401027661549 1.2590772739256118 0.5782105516717977 0.07183664503269001 0.415649511928045 0.33933132516464 0.05805516109126033 0.01680195806591277 4.729640461829074e-11 10.325171872238606 0.2641371711594569 EIIDPVLDR ddPTM_A549_MK2206_60min_R1 2 EIIDPVLDR 9 0 P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 P68366-2 TUBA4A Tubulin alpha-4A chain 0 ; 83.005 0.0040656 5598600.0 1196.68 1000.4100000000001 735.02 854.7 1230.18 1129.35 808.21 876.37 1343.46 1252.96 1018.92 False True 1398.6503279829863 1051.3265959034043 839.2568884129076 1064.1015383689414 1049.2221516095922 1248.8570673981424 955.0512953603081 1000.5981312705649 1039.168455064776 969.9154657814877 765.8940432386001 1.8261668703790435 1.3726789040659544 1.0957871990544423 1.389358681873754 1.3699312076810688 1.630587257366988 1.246975745263473 1.306444592569898 1.3568044617119999 1.2663833520367627 1.0 9.581001007685291 -13.62783608575494 0.19861368746101546 6.68184148680602e-12 1.4685072647601791 0.19643841029801934 0.19388426694216956 20.460298805774066 0.3872116957447906 8.335643040958109 0.16779110979449147 2.3559383096583636e-14 13.62783608575494 1.4685072647534974 EIIKQEES(ph)VDPDYWEK ddPTM_A549_MK2206_60min_R1 1 EIIKQEESVDPDYWEK 16 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y5Z7;A0A2R8Y4X2;A0A2R8YE38 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 EIIKQEES(1)VDPDYWEK 100.21 3.7335e-07 2707100.0 2139.6 1982.4 1507.5 1574.9 3118.0 2694.2 2239.4 2484.9 3321.5 2583.6 3356.5 True False 2500.7121718023163 2083.2956924849896 1721.2861681076147 1960.7505706999475 2659.346330389625 2979.298455734782 2646.2699927368803 2837.142184687089 2569.185553345582 1999.962965611872 2522.9884153126454 0.9911706913217956 0.8257254293523303 0.6822410113580784 0.777154012598577 1.0540461915121724 1.1808609336660751 1.0488633148991127 1.1245165326434976 1.0183104836124315 0.7926960557859078 1.0 11.30091786663648 -6.763782274614345 24.999923603229572 1.036705594191006 0.8097742564268889 0.4479471091259306 0.11307853430495547 32.94164887143434 351510.97526199336 0.013068775597102093 0.025562516828221596 1.7227320178894468e-07 6.763782274614345 -0.226931337764117 EIKDILIQYDR ddPTM_A549_MK2206_60min_R1 2 EIKDILIQYDR 11 1 P62249;M0R210 P62249 RPS16 40S ribosomal protein S16 0 ; 76.58800000000001 0.0012301999999999999 10731600.0 4014.4 4698.9 4466.3 4457.799999999999 6577.8 5314.5 4647.299999999999 4506.299999999999 7194.5 6497.4 5989.8 False True 4691.9325773430655 4938.053939375365 5099.688499249778 5549.961200118245 5610.21433355897 5876.876862520409 5491.654254374433 5145.081824964963 5564.957237255695 5029.632827359721 4502.367349929896 1.0421034563996918 1.0967683344301644 1.1326682393717125 1.2326762275860634 1.2460587725358137 1.3052859542018302 1.219725941389465 1.1427503411166737 1.2360069280758141 1.117108497918997 1.0 12.136468056314474 -10.834236095174825 0.9932869383309063 0.9959637379780214 1.1895010446285914 0.2249458427779888 0.07941597055426561 0.43000468736802944 0.726852327314077 0.06063083302208043 0.013697938998273401 1.4647513428309344e-11 10.834236095174825 0.19353730665057 EIKDILIQYDR ddPTM_A549_PD325901_60min_R1 2 EIKDILIQYDR 11 1 P62249;M0R210 P62249 RPS16 40S ribosomal protein S16 0 ; 80.905 0.00084185 19247000.0 7269.7 8001.1 8254.3 8619.6 9473.9 10108.4 9145.7 10277.9 9888.7 8531.400000000001 8834.900000000001 False True 8007.714592329718 8675.380776862892 8814.486435138158 9152.01311546807 8808.485947180703 10026.080541829335 9493.744618219069 10072.89922164343 9473.112327880564 7992.725948022174 7748.26330904548 1.033485088585122 1.1196548737231318 1.1376080140239875 1.1811696054242018 1.1368335839719719 1.2939777782364061 1.2252738761647244 1.3000202522653204 1.222611048442489 1.0315506364750542 1.0 12.919657266507155 -4.156754675116681 16.15798493713323 1.142435383425811 1.1445246968056184 0.0 0.09891035839894198 0.0 0.0 0.015245638869407633 0.0 6.970201366493235e-05 4.156754675116681 0.002089313379807445 EIKEEEEGS(ph)EDDSNVKPDFMVTLK ddPTM_A549_PD325901_60min_R1 4 EIKEEEEGSEDDSNVKPDFMVTLK 24 2 E9PGM7;O94988-6;O94988-5;O94988-1;O94988 E9PGM7 FAM13A Protein FAM13A 1 EIKEEEEGS(0.999)EDDS(0.001)NVKPDFMVTLK;EIKEEEEGS(0.992)EDDS(0.008)NVKPDFMVTLK;EIKEEEEGS(0.994)EDDS(0.006)NVKPDFMVTLK;EIKEEEEGS(0.949)EDDS(0.051)NVKPDFMVTLK 87.48899999999999 7.3079e-08 18981100.0 7922.9 7415.999999999999 7382.699999999999 7726.2 8783.8 7818.9 7622.400000000001 8835.800000000001 9517.0 9136.2 9996.0 True False 8727.226975469286 8040.972346454263 7883.734417781575 8203.429826526677 8166.8561904649405 7755.225470748028 7912.474603137326 8659.56303744899 9117.033586259002 8559.338772806357 8766.555369864811 0.9955138144075703 0.9172328248898362 0.8992967117828344 0.9357643316468532 0.9315923810324239 0.8846377104292015 0.9025751015429159 0.9877953964924914 1.039979011322847 0.9763628257261953 1.0 13.09779436256298 -8.428824927015029 4.188609440048571 1.0187572631670252 0.9221431732529878 0.5803926132603856 0.031163741134841973 0.09595752293865077 2.9880357064843297 0.004971312358588427 0.00599760551491793 3.7254185522707685e-09 8.428824927015029 -0.09661408991403742 EIKHS(ph)PGPTR ddPTM_A549_MK2206_60min_R1 4 EIKHSPGPTR 10 1 Q96CV9-3;Q96CV9-2;Q96CV9;A0A087WY28;H7C1H4 Q96CV9-3 OPTN Optineurin 1 EIKHS(0.979)PGPT(0.021)R;EIKHS(0.999)PGPT(0.001)R;EIKHS(0.868)PGPT(0.132)R;EIKHS(0.999)PGPT(0.001)R 69.71600000000001 0.00096711 239805000.0 7117.599999999999 7787.5 7349.200000000001 6563.790000000001 8562.0 6766.799999999999 7465.699999999999 6582.7 10179.5 10406.199999999999 10726.1 True False 8318.876871387254 8183.850486898129 8391.427069092193 8171.918844659728 7302.541142012813 7482.8582845616975 8822.121052413924 7515.817883673271 7873.859503321196 8055.432192580225 8062.513344699827 1.0317969739369122 1.0150495431152455 1.0407954331769993 1.0135696519537325 0.905740037852265 0.9281049177401751 1.094214753543751 0.9321929232667944 0.9766011126663562 0.9991217190202535 1.0 12.977013927969537 -6.536796251882403 24.995680432188603 0.9821000048709289 1.0276950617628213 0.19504582082993283 0.047477735080281434 310.8735868089735 558324.7901841359 0.006538665286199247 0.013615638643692921 2.9053853887159367e-07 6.536796251882403 0.04559505689189247 EIKHS(ph)PGPTR ddPTM_A549_PD325901_60min_R1 3 EIKHSPGPTR 10 1 Q96CV9-3;Q96CV9-2;Q96CV9;A0A087WY28;H7C1H4 Q96CV9-3 OPTN Optineurin 1 EIKHS(1)PGPTR;EIKHS(1)PGPTR;EIKHS(0.997)PGPT(0.003)R 99.991 0.00019478 235831000.0 7025.4 7209.4 7229.9 7264.9 8033.500000000001 7396.400000000001 8078.900000000001 8147.0 7681.6 8127.1 9231.8 True False 7738.613436173864 7816.9614393915035 7720.564490920536 7713.636373214994 7469.254674070462 7336.1661706686045 8386.346960443714 7984.501693802143 7358.769065483571 7613.953519020434 8096.347125201867 0.9558154210169091 0.9654923780453154 0.9535861508319454 0.9527304417574202 0.9225462493845619 0.9061081568295147 1.0358186019889328 0.9861856921806652 0.9088998966679178 0.9404183641435204 1.0 12.983055430557886 EIKS(ph)SQGLK ddPTM_A549_PD325901_60min_R1 1 EIKSSQGLK 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EIKS(0.5)S(0.5)QGLK 57.019 0.0040043 3989000.0 1939.6 1982.3 2148.4 1645.2 1947.2 1900.4 1999.8 2055.0 2488.4 1852.4 2276.7 True False 2136.5067641419478 2149.3553778824544 2294.203343378703 1746.8202674797058 1810.4353894753222 1884.923772475611 2075.90348333255 2014.0114128836867 2383.8212016440975 1735.439147867439 1996.6803331903964 1.0700294527006884 1.076464440578781 1.1490088349359906 0.8748622593425099 0.9067227033696061 0.9440288168030307 1.0396774329997867 1.008679947112815 1.1938922630820468 0.8691622384512933 1.0 10.963387661692154 -8.58600546550629 24.999793854547647 1.0920722678372419 1.0064927646637103 0.0 0.10873691932552751 99.99743630542402 39600.71239090353 0.017568722213507325 0.019921058805135224 2.594146715113166e-09 8.58600546550629 -0.08557950317353158 EILAGKPAAQKSPS(ph)DLLDASAVSATSR ddPTM_A549_PD325901_60min_R1 1 EILAGKPAAQKSPSDLLDASAVSATSR 27 2 K7EJ05;K7EPP9;K7ELY2;X6R2W0;K7EIY4;Q5U8S2;O60499 K7EJ05 STX10 Syntaxin-10 1 EILAGKPAAQKS(0.461)PS(0.538)DLLDASAVSATSR 55.702 0.00092231 3326500.0 1983.2 1804.5 1843.0 2042.0 2185.0 2286.9 2499.0 2669.7 2268.7 2586.2 2544.2 True False 2184.533004045323 1956.5715478932996 1968.0770628593136 2168.12970228152 2031.533137840787 2268.2762446192787 2594.100812505272 2616.4507391608645 2173.3544286167676 2422.906890636346 2231.2795290126082 0.9790494537508837 0.8768832064529032 0.8820396715288435 0.9716979312049561 0.9104789926252702 1.0165809416191984 1.1626068266100307 1.172623467898127 0.974039514259572 1.0858822747809358 1.0 11.123655546724006 -7.2671176684634995 21.95329466903029 1.0192369956644778 0.9217260261644056 0.41205904802149895 0.07412482705271897 96.5180593715381 373158.94867519743 0.012265294275464666 0.01997846226950707 5.406078299235206e-08 7.2671176684634995 -0.09751096950007221 EILDESLR ddPTM_A549_PD325901_60min_R1 2 EILDESLR 8 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ; 83.265 0.0061588 1498500.0 466.06 560.08 665.09 459.57 461.02 549.63 673.15 699.0 634.97 689.47 721.02 False True 513.374068104762 607.2799072009309 710.2270069110689 487.95659514080234 428.6395456326586 545.1539955092458 698.7670916118136 685.0578966451078 608.2844190676554 645.9367465343139 632.3391109223616 0.8118651198973426 0.960370625051362 1.1231742504035471 0.7716691672432603 0.67786340940927 0.8621228484729606 1.105051197280138 1.0833710659551772 0.9619591901889182 1.021503708021663 1.0 9.30455464444197 -7.726969125795815 24.945882755865266 0.9991796376866741 0.8706487246261854 0.32750781519970307 0.11381480108080644 219.280255866009 158691.1390492535 0.018462166780293207 0.02738312356378971 1.875127807069423e-08 7.726969125795815 -0.1285309130604887 EILKEQENRK ddPTM_A549_PD325901_60min_R1 1 EILKEQENRK 10 2 Q99497;K7ELW0;K7EN27 Q99497 PARK7 Protein deglycase DJ-1 0 39.918 0.034959 2514700.0 1680.3 1606.4 1445.2 1624.4 2088.1 1810.4 1981.0 1819.2 2060.1 2030.8 2122.6 False True 1850.882819028519 1741.7769656612911 1543.2799626935857 1724.7354987199321 1941.4390595539332 1795.656702636208 2056.388039044794 1782.9146288652075 1973.5211611907287 1902.5749414215043 1861.533656270013 0.9942784610927555 0.9356677274110207 0.8290368307312168 0.9265131967454268 1.0429245009966825 0.9646114624831421 1.1046741121861927 0.9577665291519167 1.0601587323138209 1.0220470282733036 1.0 10.862275984813317 -6.722311352331584 6.880745058165551 1.0253834722163833 0.9150389488550777 0.4511817911507733 0.053020783755421436 0.12617246887147265 16.206974499129245 0.007341432830607005 0.015214921646110774 1.8953466311415135e-07 6.722311352331584 -0.11034452336130551 EILS(ph)PVDIIDR ddPTM_A549_MK2206_60min_R1 2 EILSPVDIIDR 11 0 O14495;A0A286YF41;A0A286YEZ7;A0A286YES4 O14495 PPAP2B Lipid phosphate phosphohydrolase 3 1 EILS(1)PVDIIDR;EILS(1)PVDIIDR 154.67 7.7138e-24 3666600.0 376.65 650.48 311.32 310.73 433.14 402.72 371.76 344.49 538.12 449.8 658.57 True False 440.2193117916164 683.5866535752809 355.4698572837561 386.85886394919964 369.4256797770883 445.33556309609935 439.3039798606157 393.32251245637883 416.23667920106124 348.1898676003329 495.02889339265585 0.8892800353017686 1.3809025345780401 0.7180790091817897 0.7814874426781065 0.7462709443993215 0.8996152932488733 0.8874309878154137 0.7945445563000628 0.8408331003639079 0.7033728177238928 1.0 8.95136892332612 -5.773430729405009 24.999999024249597 0.8787771705450853 1.135091385269124 0.3652972374244874 0.14403261664864328 157.66189724213584 328701.62230643653 0.018685457661375585 0.05873879550118967 1.6848811463109756e-06 5.773430729405009 0.2563142147240387 EILS(ph)PVDIIDR ddPTM_A549_PD325901_60min_R1 2 EILSPVDIIDR 11 0 O14495;A0A286YF41;A0A286YEZ7;A0A286YES4 O14495 PPAP2B Lipid phosphate phosphohydrolase 3 1 EILS(1)PVDIIDR;EILS(1)PVDIIDR 145.29 2.2001e-11 11432600.0 3646.0 3607.0 3348.1000000000004 3041.65 3922.8 3121.3999999999996 3411.3 2923.99 3073.1000000000004 3671.0 3413.3 True False 4016.1392359566607 3910.9745487676014 3575.322199760862 3229.525812411648 3647.2760609253255 3095.9803532968704 3541.118888234986 2865.668725624218 2943.9482939931213 3439.21243350322 2993.485738691431 1.3416263134469688 1.3064951331544477 1.1943675406730931 1.0788512437755589 1.2184043550912962 1.0342392192756007 1.1829416263673087 0.9573016128270961 0.9834515848670906 1.1488988870234718 1.0 11.547610681754929 -4.965367678177344 0.31534663251429285 0.9794682711844587 1.7237200045461665 0.5829126398254423 0.0805261821417413 2.653972388265563 0.16004403708140658 0.021118988331763087 0.7829109646679572 1.0830096386841565e-05 4.965367678177344 0.7442517333617078 EILSEVER ddPTM_A549_MK2206_60min_R1 2 EILSEVER 8 0 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 ; 101.43 0.0063603999999999996 4986800.0 1091.77 1473.54 1611.83 995.81 1447.3600000000001 1747.0900000000001 1452.78 1016.29 2069.01 2085.0 1930.82 False True 1276.0340847862285 1548.5368920017813 1840.4117309060675 1239.7834947036088 1234.4552613061987 1931.9659041755172 1716.7313209110864 1160.3522197575928 1600.3825385300433 1613.9970519046112 1451.3441060789403 0.8792085070946115 1.066967430753155 1.268074003399691 0.8542312532987787 0.8505600127052538 1.3311563371384478 1.1828561632769061 0.7995017962297633 1.1026899353687778 1.1120705593831268 1.0 10.503173900053856 EILSEVER ddPTM_A549_PD325901_60min_R1 1 EILSEVER 8 0 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 95.815 0.006926100000000001 3010000.0 1130.9 1042.4 953.91 953.98 1219.7 1211.1 1023.4 1154.3 1439.5 1113.9 1386.8 False True 1245.708135475422 1130.2467063031186 1018.6480689268193 1012.9051779542236 1134.0324797365706 1201.2372031389255 1062.3460470259681 1131.276580969167 1379.0028209960947 1043.5681639006368 1216.2323916495116 1.0242352892656756 0.9293015989898319 0.8375439397279009 0.8328220699503603 0.9324143046367499 0.9876707867562639 0.8734729105390496 0.9301483735644276 1.1338316841946843 0.8580335230878867 1.0 10.248203202791746 -8.670242238337424 7.23951294696441 1.063042720603 0.9136834392479819 0.00679495501588212 0.08705599166920494 0.1439931038400979 9.847933084093816 0.012186575340303193 0.01380772595248923 2.1367699215245252e-09 8.670242238337424 -0.14935928135501808 EILTT(ph)PNR ddPTM_A549_MK2206_60min_R1 2 EILTTPNR 8 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 EILT(0.011)T(0.989)PNR;EILT(0.017)T(0.983)PNR 89.355 0.0028215 13870100.0 2788.0 3152.4 2541.46 2571.5 3835.8 3123.5 2679.7 3130.7 4453.1 4161.3 4005.9 True False 3258.546239944316 3312.843695010936 2901.877243647614 3201.517615439023 3271.558901253535 3454.0266967885054 3166.566803401369 3574.4863123666423 3444.4799601394557 3221.2594398516326 3011.124472784427 1.0821692259473734 1.100201511081176 0.9637187933862492 1.0632299143975728 1.0864907548070508 1.147088646785339 1.0516226851536306 1.187093507649409 1.1439181579080653 1.0697862107549778 1.0 11.556086631567965 -6.52967347302228 16.67834691758892 1.0841288174760915 1.0471187513915163 0.09887434298725428 0.058377997598247196 7.587795149523307 18624.79066379467 0.010228759408427957 0.02144293171780863 2.9534289458275894e-07 6.52967347302228 -0.03701006608457513 EINALAEHGDLELDERGDREEEVERPVS(ph)SPGDPEQK ddPTM_A549_MK2206_60min_R1 3 EINALAEHGDLELDERGDREEEVERPVSSPGDPEQK 36 3 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 EINALAEHGDLELDERGDREEEVERPVS(0.5)S(0.5)PGDPEQK;EINALAEHGDLELDERGDREEEVERPVS(0.5)S(0.5)PGDPEQK;EINALAEHGDLELDERGDREEEVERPVS(0.5)S(0.5)PGDPEQK 118.11 2.4436999999999997e-21 58071000.0 1974.9499999999998 2384.9700000000003 2003.5 2074.9700000000003 3166.74 2408.23 2482.31 2124.8599999999997 3469.49 3375.5 3336.11 True False 2308.2732771083306 2506.354785969494 2287.626426403719 2583.337743148944 2700.9167409551133 2663.0673001463038 2933.3135954589106 2426.0654121108328 2683.6560546370492 2612.972205613434 2507.6618150480185 0.9204882665026066 0.9994787857474715 0.9122547596634014 1.0301778842931721 1.0770657848468272 1.0619722660231636 1.1697405040251576 0.9674611614502638 1.0701826053788122 1.0419954516727366 1.0 11.29212708310078 -6.370323603873432 5.885949142827476 1.0443296797826995 0.9500554923905978 0.4515973693673069 0.05262673648818611 0.1839970038406718 8.492571281190312 0.00758728927218402 0.01784824477009551 4.262617819351665e-07 6.370323603873432 -0.0942741873921017 EINALAEHGDLELDERGDREEEVERPVS(ph)SPGDPEQK ddPTM_A549_PD325901_60min_R1 3 EINALAEHGDLELDERGDREEEVERPVSSPGDPEQK 36 3 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 EINALAEHGDLELDERGDREEEVERPVS(0.5)S(0.5)PGDPEQK;EINALAEHGDLELDERGDREEEVERPVS(0.568)S(0.432)PGDPEQK;EINALAEHGDLELDERGDREEEVERPVS(0.5)S(0.5)PGDPEQK 190.48 5.9161e-78 115218000.0 4112.37 4666.599999999999 5192.6 4761.360000000001 5367.5 5229.4 4919.799999999999 4752.5 4768.0 5705.3 4663.0 True False 4529.8547750332145 5059.870759434123 5545.001061640409 5055.458393366864 4990.505316869756 5186.813500202044 5107.025681217862 4657.707659235873 4567.61754116664 5345.0663843274115 4089.4805611924344 1.1076846331095833 1.237289353432881 1.355918185370605 1.2362103982939006 1.2203274333243426 1.2683306406742385 1.2488201385969484 1.1389484775733354 1.1169187560179494 1.307028192052065 1.0 11.997701890816169 -9.048009795253313 0.6598019777703826 1.0190605330135294 1.249094529551941 0.0 0.10411825356273653 0.24824937930979749 0.23751318648187458 0.01963765549463018 0.01627065913130166 8.953445713584468e-10 9.048009795253313 0.2300339965384115 EINALAEHGDLELDERGDREEEVERPVSS(ph)PGDPEQK ddPTM_A549_MK2206_60min_R1 1 EINALAEHGDLELDERGDREEEVERPVSSPGDPEQK 36 3 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 EINALAEHGDLELDERGDREEEVERPVS(0.128)S(0.872)PGDPEQK 124.59 5.017699999999999e-22 17799000.0 1069.5 966.08 1147.1 1055.6 1466.9 1060.9 1602.6 1279.5 1638.0 1804.9 1957.4 True False 1250.0054532354548 1015.2493455386898 1309.7760288134289 1314.2220473876844 1251.1209531906802 1173.1637338315757 1893.771675609594 1460.8730433044118 1266.9956153485057 1397.1718364425087 1471.323558508259 0.8495789019396973 0.690024529049224 0.8902025806895802 0.8932243623694462 0.8503370628138128 0.797352646905905 1.2871211533713531 0.9928972012013164 0.8611264381799767 0.9496020289779556 1.0 10.522898828960471 EINAREES(ph)LVEELSPASEK ddPTM_A549_MK2206_60min_R1 2 EINAREESLVEELSPASEK 19 1 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EINAREES(1)LVEELSPASEK;EINAREES(1)LVEELSPASEK 138.93 7.5828e-18 23134900.0 1432.05 1686.8200000000002 1296.27 1217.76 1534.47 1404.46 1437.26 1491.1599999999999 1833.33 1980.4299999999998 2211.87 True False 1673.7450297389744 1772.6719330092465 1480.1005778659073 1516.1112546673241 1308.7514957001176 1553.0790249949046 1698.3915378052202 1702.536496485976 1418.0836822264205 1533.0494875316303 1662.6016344935451 1.006702384392172 1.066203651092422 0.8902316388716708 0.9118908722408153 0.7871708222509862 0.9341257657719055 1.0215264454028865 1.0240195012226099 0.8529305233471585 0.9220786601708241 1.0 10.69922681962062 -5.75852627548166 24.999931553316728 0.9289729651237673 1.0364530368104243 0.27241250004020956 0.06886885982076807 83.86332321234838 719664.913615706 0.010825622764361723 0.038570588723789365 1.7437078572770161e-06 5.75852627548166 0.10748007168665707 EINAREES(ph)LVEELSPASEK ddPTM_A549_PD325901_60min_R1 2 EINAREESLVEELSPASEK 19 1 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 EINAREES(1)LVEELSPASEK;EINAREES(1)LVEELSPASEK 181.33 7.428399999999999e-44 33696000.0 4437.5 3204.4 3859.8999999999996 4457.799999999999 4974.6 4119.1 4268.1 4212.5 5008.3 3972.4 4621.2 True False 4887.991733285155 3474.446033842777 4121.856025464277 4733.148181601644 4625.2012574383425 4085.5554152832515 4430.524881093937 4128.478382857682 4797.818567832397 3721.5819860659753 4052.821696200404 1.2060712510169738 0.8572906222595815 1.0170336458000593 1.1678648942387617 1.1412298897270894 1.0080767725640474 1.093195115207668 1.0186676573332125 1.1838217734400804 0.9182693602225402 1.0 11.984710990107054 -6.036755287705458 24.237689028031024 1.0869304023172706 1.0080512292706374 0.0 0.10776567156190342 657.4931252193917 433573.3680906437 0.013671166415919887 0.036185157938301155 9.188501959736434e-07 6.036755287705458 -0.07887917304663317 EINSDQATQGNIS(ph)SDR ddPTM_A549_PD325901_60min_R1 1 EINSDQATQGNISSDR 16 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 EINSDQAT(0.007)QGNIS(0.497)S(0.497)DR 83.96600000000001 0.00013548 1430900.0 705.43 679.56 721.54 726.62 587.8 752.8 527.06 975.45 885.26 575.92 743.46 True False 777.0447342898814 736.8289061160277 770.5080433724951 771.5016671262481 546.5149557999152 746.6694463900446 547.1175567182983 955.9938845242789 848.0556007745764 539.5563129128781 652.0191331812413 1.1917514298984333 1.1300725218307541 1.1817261245281856 1.1832500426207497 0.8381885254400976 1.1451649321193975 0.8391127328562863 1.466205262811731 1.3006606058274106 0.8275160734629823 1.0 9.348770490029676 -5.089889775063476 1.267629782342835 1.1299727003444267 1.2303989557637067 0.0 0.19678915030896527 14.32476756901826 14.690101231193712 0.027091263310033854 2.063795248297598 8.130368405968299e-06 5.089889775063476 0.10042625541928007 EIPARQS(ph)R ddPTM_A549_MK2206_60min_R1 2 EIPARQSR 8 1 E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;Q8TEU7-6 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 EIPARQS(1)R;EIPARQS(1)R 93.096 0.00071624 81726000.0 1895.87 2438.8 2138.2 1464.67 2382.3 1940.69 1987.13 1777.75 2824.7 2755.6 2661.7 True False 2215.846506428705 2562.9245030429756 2441.4289118724364 1823.5142157515347 2031.8668258137266 2146.0525276742383 2348.1657991726547 2029.7515066310405 2184.909960119001 2133.108046152684 2000.7264308171216 1.1075209845274678 1.2809969736823266 1.2202712346211804 0.9114260638856002 1.015564544216016 1.0726366656723596 1.1736566094214262 1.014507268643452 1.0920583276478517 1.0661667748756116 1.0 10.966308198589745 -6.227738165462389 24.728966278131256 1.044585504170276 1.2107365231076646 0.4916622685498715 0.07218206579138678 347.39440994998745 254907.33717204368 0.010075520933052147 0.02665573450233506 5.91918392030984e-07 6.227738165462389 0.16615101893738848 EIPARQS(ph)R ddPTM_A549_PD325901_60min_R1 3 EIPARQSR 8 1 E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;Q8TEU7-6 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 EIPARQS(1)R;EIPARQS(1)R;EIPARQS(1)R 64.82 0.0025768 186851000.0 16501.6 16828.6 15621.6 17716.7 20059.1 22037.3 20206.4 21992.6 19569.6 20868.0 21806.7 True False 18176.830284164127 18246.805181976837 16681.77571631201 18811.02032145496 18650.21801613827 21857.835535243514 20975.36560936635 21553.940340139074 18747.157767117165 19550.390918644833 19124.614144060713 0.9504416741296228 0.9541005661357886 0.8722673090632083 0.9836026065549069 0.9751944732401427 1.1429164202003845 1.0967732708939595 1.127026154764686 0.9802633206557649 1.0222632870591195 1.0 14.223143020004896 -6.65644460563737 2.6775288940928186 1.0205068416600416 0.929249031605331 0.39687857618274924 0.06086905657353832 0.3015940308940029 4.367549034614476 0.010260934834101792 0.023373711517740356 2.205745461799783e-07 6.65644460563737 -0.09125781005471056 EIPAS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 EIPASPSR 8 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 EIPAS(0.986)PS(0.014)R;EIPAS(0.999)PS(0.001)R 124.33 0.00112 59600000.0 7790.0 8752.8 7641.8 7644.1 9753.2 7914.9 7980.9 7535.0 11770.6 13187.0 11331.5 True False 9104.761552785585 9198.28013376847 8725.522148885419 9516.904843156692 8318.517199985912 8752.449464514593 9430.926223557099 8603.109324969711 9104.577893785785 10208.047541230744 8517.575816509836 1.06893812851511 1.0799176117621645 1.0244137929447619 1.1173255217417415 0.976629663085818 1.0275751755035154 1.1072312623595193 1.0100420014218228 1.0689165661593698 1.198468644264278 1.0 13.056227168734921 -10.897030980975327 0.9582265407095121 0.9974279030051475 1.0538454255742618 0.0 0.07139628658172915 0.7928707809599977 1.1906505343351412 0.032919796662060574 0.006528046207428876 1.2675614394489234e-11 10.897030980975327 0.05641752256911425 EIPAS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 EIPASPSR 8 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 EIPAS(0.996)PS(0.004)R;EIPAS(0.997)PS(0.003)R 111.31 0.0015266 97841000.0 13735.7 12425.5 13612.3 13690.599999999999 16506.0 14076.0 14549.5 15219.400000000001 15265.8 15746.0 16763.7 True False 15130.138152312093 13472.640492296046 14536.112535409566 14536.237268391473 15346.675502608701 13961.369722882931 15103.189184291883 14915.837127611672 14624.231514249514 14751.79487277083 14701.871173849813 1.0291301000667206 0.9163895080416569 0.9887253373070578 0.9887338214639676 1.0438586572507722 0.9496321629940541 1.0272970702638107 1.014553654513205 0.9947190627177854 1.0033957377486626 1.0 13.843712164640719 -5.988913522354896 24.99920724853082 0.9998270702404342 0.9677092121684163 0.10313529839645574 0.03302607407572199 296.8941351013886 669463.6342297705 0.0039197682286815595 0.012173274562399338 1.0258561765889677e-06 5.988913522354896 -0.032117858072017835 EIPEDVDMEEEKESEDS(ph)DEENDFTEK ddPTM_A549_PD325901_60min_R1 1 EIPEDVDMEEEKESEDSDEENDFTEK 26 1 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 EIPEDVDMEEEKES(0.034)EDS(0.966)DEENDFTEK 121.52 7.560900000000001e-18 13241000.0 2496.5 2773.0 2438.6 2660.1 3663.8 3162.6 3074.2 3120.6 3523.4 2914.4 3247.8 True False 2749.9428421738367 3006.6904418443455 2604.0980604930655 2824.4083354745694 3406.467327423835 3136.844834156688 3191.1903632667886 3058.357184936657 3375.3237509535516 2730.384286625386 2848.3411895004924 0.9654541570759254 1.055593498745009 0.9142507470987844 0.9915976168465548 1.1959477818109352 1.1012883027214833 1.120368014558825 1.0737327382724802 1.1850138471457048 0.9585875093510857 1.0 11.47590625502471 -6.617418307910762 10.554523846772133 1.0980400171653864 0.9806417813018837 0.3423589386898349 0.0723423165229286 0.31298809883811934 32.41751955260492 0.010804812514521938 0.02250171017181134 2.4131354078806533e-07 6.617418307910762 -0.11739823586350262 EIPFNEDPNPNTHSS(ph)GPSTPLK ddPTM_A549_PD325901_60min_R1 1 EIPFNEDPNPNTHSSGPSTPLK 22 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 EIPFNEDPNPNT(0.029)HS(0.232)S(0.605)GPS(0.058)T(0.076)PLK 65.581 0.00030572 3189200.0 2617.1 2653.6 2682.1 3294.1 3500.8 3921.4 3298.2 2690.6 3477.0 3200.7 3299.0 True False 2882.7860653928074 2877.2281848100097 2864.123434777517 3497.569075556099 3254.915885104359 3889.4654185360246 3423.7148058442895 2636.9338722651332 3330.873781593205 2998.6072557651205 2893.2439140840343 0.9963854244571918 0.994464438619896 0.9899350071507067 1.2088745986918932 1.1250056966368236 1.3443268296884612 1.1833481405345652 0.9114108421446224 1.1512592372108106 1.0364170269807491 1.0 11.498472239041206 -6.174792482093448 24.999627535091854 1.1001018457024114 0.9936810614065646 0.1944854192927561 0.10927322114251801 123.63074807724854 35667.62963646205 0.016482940554817985 0.0436097588991718 6.686633470742679e-07 6.174792482093448 -0.10642078429584678 EIPS(ph)ATQS(ph)PISK ddPTM_A549_MK2206_60min_R1 2 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 EIPS(0.948)AT(0.052)QS(0.985)PIS(0.015)K;EIPS(0.966)AT(0.035)QS(0.998)PIS(0.001)K 140.1 3.7637e-09 61900000.0 19065.300000000003 19398.4 15330.5 13331.900000000001 20291.6 14758.1 13878.099999999999 13009.400000000001 22086.0 17817.2 18516.199999999997 True False 22283.056538167282 20385.695702734476 17504.595423000857 16598.216098491735 17306.73252011998 16319.792346366079 16399.571128963886 14853.52228961658 17083.55626409469 13792.282145417179 13918.116518877401 1.6010109204032281 1.4646878171399826 1.2576842131806447 1.1925619444254016 1.2434680006196623 1.1725575313463743 1.1782895413126369 1.0672077841474075 1.2274330539569733 0.9909589509981792 1.0 13.764676369994236 -2.0000000000000018 0.33194893245628915 1.0924418552078452 6.449465198755251 0.8538976786677455 0.06680025016796234 16.337541167956363 0.20301941554943712 0.022817826403404934 54.67613293730792 0.009999999999999959 2.0000000000000018 5.357023343547406 EIPS(ph)ATQS(ph)PISK ddPTM_A549_PD325901_60min_R1 2 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 EIPS(0.99)AT(0.011)QS(0.917)PIS(0.082)K;EIPS(0.892)AT(0.121)QS(0.973)PIS(0.014)K 132.21 6.892e-08 67309000.0 12013.4 11742.0 12998.5 12386.900000000001 14180.3 13020.2 12708.1 11703.4 12796.400000000001 14000.2 13930.099999999999 True False 13232.991524202353 12731.539548552582 13880.656376330322 13152.010680308988 13184.324647379264 12914.167808033557 13191.713699639155 11469.966505860313 12258.61180867969 13116.224982710917 12216.786010179447 1.0831810848758558 1.0421349394140345 1.1361954252750668 1.076552431167271 1.0791974776666817 1.057083900567058 1.079802305503867 0.9388693962800971 1.003423633553489 1.0736232075917533 1.0 13.576577170676035 -8.23050919082169 24.254419362473627 0.996955840723475 1.0789848954094745 0.4956941598837583 0.03622891403668708 199.77854428795956 156659.83206450022 0.004269729147861556 0.0055118618702166625 5.881536671217078e-09 8.23050919082169 0.08202905468599953 EIPS(ph)ATQS(ph)PISKK ddPTM_A549_MK2206_60min_R1 1 EIPSATQSPISKK 13 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 EIPS(0.777)AT(0.261)QS(0.739)PIS(0.223)KK 41.871 0.022412 3610000.0 2175.0 2553.8 2160.6 2064.9 3049.1 1701.5 1642.9 1623.1 2689.9 2508.8 2202.1 True False 2542.0868263554107 2683.7775118382624 2467.005568698713 2570.800592696885 2600.5814291183465 1881.5516006357109 1941.3936639579442 1853.1793955352782 2080.6419448876345 1942.0603375627277 1655.2577951318276 1.5357649025014588 1.6213652759898476 1.4904056491709416 1.553111908161799 1.5711035687412254 1.1367121219241023 1.1728648369260983 1.1195714655357885 1.2569896671122027 1.1732675981193967 1.0 10.69284020912344 -7.263511031451251 23.760293670337003 1.1292853118165254 1.5544520610158452 0.9086683212283074 0.06481710653000398 27.344435403177833 313621.98315862904 0.01410238749064111 0.023237346541132055 5.451160490992212e-08 7.263511031451251 0.42516674919931985 EIPS(ph)LSPTIPR ddPTM_A549_MK2206_60min_R1 1 EIPSLSPTIPR 11 0 Q9ULD5 Q9ULD5 ZNF777 Zinc finger protein 777 1 EIPS(0.496)LS(0.496)PT(0.008)IPR 62.408 0.0072771 2332200.0 505.68 605.75 517.93 410.17 835.41 577.73 614.2 484.53 692.85 816.24 777.4 True False 591.0264213109907 636.5800876325576 591.3802620550423 510.6616684132307 712.5222956609356 638.8650051338631 725.7921896664255 553.2136113108921 535.9205812540981 631.8508170967003 584.3501248514978 1.0114251647694772 1.0893812811186327 1.0120306934225969 0.8738967387796936 1.2193413937269382 1.0932914668174656 1.2420502003843548 0.94671599745355 0.9171223868400693 1.0812880672478233 1.0 9.190689237012581 EIPSATQS(ph)PISK ddPTM_A549_MK2206_60min_R1 2 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 EIPSAT(0.007)QS(0.824)PIS(0.17)K;EIPSATQS(0.722)PIS(0.278)K 216.83 7.5609e-32 1230120000.0 31300.0 33693.0 35419.0 31573.0 44453.0 33404.0 31827.0 36759.0 48817.0 44872.0 47229.0 True False 36582.67478847099 35407.829785561305 40441.9467915115 39308.386417365815 37914.02258653301 36938.789108219346 37609.553924639076 41969.70081971616 37760.02744473015 34735.384035042545 35500.73584591122 1.0304765215925624 0.9973829821231546 1.1391861556630067 1.1072555393775911 1.0679784991245396 1.0405077029543812 1.0594020948715275 1.1822205883811279 1.06364069772033 0.9784412409311559 1.0 15.115561308117323 -10.127989634333465 1.0277292029972496 1.0068452261252288 1.0766568216220753 0.2970693327455024 0.04988306577107847 0.5066605125414847 1.069950597509347 0.019325472667721683 0.009460065885254965 7.447497492537019e-11 10.127989634333465 0.06981159549684657 EIPSATQS(ph)PISK ddPTM_A549_PD325901_60min_R1 4 EIPSATQSPISK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 EIPS(0.001)AT(0.165)QS(0.834)PIS(0.001)K;EIPS(0.014)AT(0.088)QS(0.89)PIS(0.007)K;EIPSAT(0.01)QS(0.937)PIS(0.053)K;EIPSATQS(1)PISK 206.88 1.514e-25 2128466100.0 19026.78 20403.409999999996 21881.870000000003 20036.71 23405.449999999997 20150.76 22018.61 23354.14 19390.89 21320.71 23539.91 True False 20958.364698824873 22122.876966473625 23366.905284573688 21274.332070029952 21761.53193641905 19986.658891523188 22856.54025259571 22888.323356731595 18575.95832693639 19974.51673198488 20644.650301784146 1.0151959172209188 1.0716033763265889 1.1318624894583116 1.030500965579029 1.0541002932143821 0.9681277521952458 1.1071410713418772 1.1086806035534322 0.899795252299867 0.967539601785294 1.0 14.333480360565128 -8.759819858973405 24.999970057845342 0.9526810909855224 1.0608324458298628 0.4761553015505917 0.04907709951559521 28.91803317518017 446395.979727416 0.00949895088254258 0.010495534668447354 1.7385218007446109e-09 8.759819858973405 0.10815135484434035 EIPSATQS(ph)PISKK ddPTM_A549_MK2206_60min_R1 2 EIPSATQSPISKK 13 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 EIPSAT(0.002)QS(0.994)PIS(0.003)KK;EIPSATQS(0.978)PIS(0.022)KK 152.37 1.4478e-13 145165000.0 8732.1 12161.3 12556.6 10454.1 16931.2 10544.599999999999 11032.9 9765.1 16951.2 17198.8 19283.7 True False 10205.865000651995 12780.258224887863 14337.314692179156 13015.354969302378 14440.642908625014 11660.422573061 13037.435117829215 11149.332829364528 13111.78026550403 13313.579134914642 14495.025086955004 0.7040943316363697 0.8816996278529818 0.9891196880426387 0.8979187611766002 0.9962482177158195 0.8044430763734901 0.8994420526779517 0.7691834103411468 0.9045710639924422 0.9184930039821994 1.0 13.82327020986454 -10.024675957030986 0.9414534598582384 0.9898324613839197 0.8771118060022419 0.11174068838753792 0.0856658534529913 0.5450811950449784 0.9753128213608757 0.03179235706706611 0.015908860405371657 9.447655374273377e-11 10.024675957030986 -0.11272065538167775 EIPSATQS(ph)PISKK ddPTM_A549_PD325901_60min_R1 2 EIPSATQSPISKK 13 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 EIPSAT(0.002)QS(0.989)PIS(0.009)KK;EIPSAT(0.001)QS(0.998)PIS(0.001)KK 200.69 6.285e-31 300360000.0 13195.3 12478.400000000001 12966.8 12197.9 15273.599999999999 14942.4 15011.4 15022.800000000001 15081.0 14053.6 15462.300000000001 True False 14534.877142133555 13529.998560948608 13846.805023702735 12951.336579559127 14200.835027059515 14820.714048536927 15582.667041553264 14723.158468841391 14447.198015590197 13166.25329759762 13560.535123595502 1.071851295664777 0.9977481299691662 1.0211105164728433 0.9550756265527928 1.0472178935143852 1.092929881708628 1.149118887973619 1.0857358013271106 1.0653855385435262 0.9709243165992891 1.0 13.727126490540272 -4.889482583335185 18.0602006559182 1.0400687415927168 4.221388063379402 0.02881739465675781 0.05495824792353434 718.5902854155769 118596.50543158692 0.007598128247904407 935.9080189570916 1.289785281575746e-05 4.889482583335185 3.1813193217866855 EIPSLS(ph)PTIPR ddPTM_A549_MK2206_60min_R1 1 EIPSLSPTIPR 11 0 Q9ULD5 Q9ULD5 ZNF777 Zinc finger protein 777 1 EIPS(0.021)LS(0.489)PT(0.489)IPR 125.72 2.6172e-06 2890700.0 935.73 794.49 996.21 768.91 1092.3 1050.5 992.6 1100.3 1079.5 1314.3 1326.5 True False 1093.6583475979533 834.9261474588375 1137.4875578975034 957.2929845176817 931.62411696106 1161.663212734536 1172.9425715774892 1256.2708945274278 834.9949736072718 1017.3987171790068 997.0934404624536 1.096846396954244 0.8373599841070034 1.140803370815412 0.9600835244424912 0.934339831309061 1.165049498466016 1.1763617370037822 1.2599329647026534 0.8374290108858803 1.0203644672530747 1.0 9.961584899789441 -8.797721672485618 24.99999686421341 0.9232303862213805 1.0642113844224166 0.1405329577712302 0.1242599286389811 204.59127306909838 140970.96307440527 0.022566466346172334 0.02402418579455945 1.5932294573375033e-09 8.797721672485618 0.14098099820103605 EIPSLS(ph)PTIPR ddPTM_A549_PD325901_60min_R1 2 EIPSLSPTIPR 11 0 Q9ULD5 Q9ULD5 ZNF777 Zinc finger protein 777 1 EIPS(0.022)LS(0.803)PT(0.175)IPR;EIPS(0.074)LS(0.612)PT(0.314)IPR 101.39 0.0002497 7547700.0 2720.7 2376.1000000000004 2682.1000000000004 2445.1 3239.0 2681.1 2382.6 2618.8 2642.5 3224.2 3463.0 True False 2996.9034611265206 2576.342285923676 2864.123434777517 2596.1282737749966 3011.5038139433896 2659.266010515872 2473.2711468087455 2566.5659795911424 2531.4449145412846 3020.623461754585 3037.072953765688 0.9867736161591506 0.8482977936796847 0.9430538806209019 0.8548126150726932 0.9915809925505428 0.8756016239974181 0.8143601370332969 0.8450788040533697 0.8335146876872116 0.994583767903663 1.0 11.568465848673503 -10.944589609210729 1.2329759934512994 0.9993484189778593 0.882014614605182 0.34020034024892887 0.05800793965488738 0.407318271910444 1.1104234709565353 0.03966305798767272 0.009493135446358892 1.1360838620806799e-11 10.944589609210729 -0.11733380437267726 EIPTDVKPSSLELPYT(ph)PPLESK ddPTM_A549_MK2206_60min_R1 2 EIPTDVKPSSLELPYTPPLESK 22 1 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 EIPT(0.001)DVKPS(0.136)S(0.136)LELPY(0.1)T(0.615)PPLES(0.011)K;EIPTDVKPSSLELPY(0.032)T(0.967)PPLESK 67.832 0.0003051 3967600.0 1157.71 1418.3899999999999 1418.55 1162.0900000000001 2105.19 1589.1899999999998 1491.16 1161.61 1851.54 1792.8400000000001 1826.47 True False 1353.1031447080106 1490.5799925664776 1619.7217205764891 1446.802102168202 1795.5193397283304 1757.3570309810536 1762.0844701123199 1326.2717747814283 1432.1691463018146 1387.8361988185438 1372.907090992429 0.9855751737212584 1.0857107537327866 1.1797751874131892 1.05382375228491 1.3078229047753036 1.2800261885971604 1.28346956736786 0.966031702715375 1.0431653792876452 1.0108740845786754 1.0 10.423018281669453 -8.276364068453416 24.89292156973218 1.0168767970273453 1.1706065175418303 0.39585030350326156 0.09643765062408945 647.7594228504096 1080396.791287446 0.01649308009785798 0.0199781924156394 5.292196138285777e-09 8.276364068453416 0.15372972051448497 EIPTDVKPSSLELPYT(ph)PPLESK ddPTM_A549_PD325901_60min_R1 2 EIPTDVKPSSLELPYTPPLESK 22 1 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 EIPTDVKPSSLELPY(0.008)T(0.991)PPLESK;EIPTDVKPSSLELPY(0.011)T(0.989)PPLESK 91.175 6.522399999999999e-07 7817900.0 1794.23 2159.84 1976.27 1922.9700000000003 2563.9 2365.5 2702.8 2099.2 2550.3 2156.36 2854.2 True False 1976.3789087576856 2341.8572967591394 2110.3915664769247 2041.7474895182647 2383.820508974826 2346.2361522790256 2805.656533028912 2057.3298092094587 2443.119759907147 2020.207061593301 2503.151494264518 0.7895562507048299 0.9355635494395953 0.8430938244498881 0.8156707631146296 0.9523277014742754 0.9373128864373438 1.1208496726856225 0.821895843668842 0.9760175384930069 0.807065439795478 1.0 11.289529892272522 -6.896814302858822 4.3731620945148535 0.9811386798777271 0.8525040238310472 0.15348766188443608 0.09046069019356244 0.15988495033938432 5.451939843647898 0.010002349404330674 0.01939819463263829 1.268194008737653e-07 6.896814302858822 -0.1286346560466799 EIQNGNLHES(ph)DS(ph)ESVPR ddPTM_A549_MK2206_60min_R1 1 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 2 EIQNGNLHES(0.733)DS(0.733)ES(0.534)VPR 66.045 0.00080291 3003800.0 357.14 274.32 368.56 249.72 556.54 231.85 326.28 346.35 447.08 457.28 320.56 True False 417.4165007653203 288.2817162845453 420.8273499951856 310.9014112103571 474.67370324408006 256.38421311042566 385.5608525632711 395.4461731523897 345.81709384005484 353.98013040524705 240.95610499407772 1.7323341974488657 1.19640760416355 1.7464896770535399 1.2902823575190117 1.9699592307725373 1.0640287081197928 1.6001290051262553 1.6411544051233276 1.4351871011882202 1.4690647925851361 1.0 7.912626544216819 -10.313848232190416 0.6086439063532647 0.9727666656006726 1.5258979569973357 0.04297125803842827 0.28528678505335514 0.6715869745824008 0.43639277575512797 0.1884012297776334 0.050582764294078326 4.8545811788986364e-11 10.313848232190416 0.5531312913966631 EIQNGNLHES(ph)DS(ph)ESVPR ddPTM_A549_PD325901_60min_R1 3 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 2 EIQNGNLHES(0.999)DS(0.581)ES(0.42)VPR;EIQNGNLHES(0.992)DS(0.656)ES(0.352)VPR;EIQNGNLHES(0.993)DS(0.864)ES(0.143)VPR 106.03 3.8595e-09 20475800.0 1800.94 2104.31 1587.07 1676.3400000000001 2074.88 1905.9899999999998 1381.8 1627.97 2018.19 1891.17 2326.36 True False 1983.7701030180444 2281.647588776588 1694.7781140272002 1779.8837145556333 1929.147586747411 1890.4682493689693 1434.3851551499733 1595.4988612322413 1933.3724927447765 1771.7612034509086 2040.232468011073 0.9723255237438354 1.1183272615011657 0.830678925367441 0.8723926035206951 0.9455528313535989 0.9265945322455819 0.7030498620327752 0.7820181701096142 0.9476236277278396 0.868411434103936 1.0 10.994517829672127 -4.223363649229579 15.800670732151028 0.9365979208067078 0.9221790793252361 0.0 0.11162184999517669 0.0 0.0 0.015310433439951296 0.0 5.979107348303341e-05 4.223363649229579 -0.014418841481471656 EIQNGNLHES(ph)DSES(ph)VPR ddPTM_A549_MK2206_60min_R1 4 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 2 EIQNGNLHES(0.955)DS(0.246)ES(0.799)VPR;EIQNGNLHES(0.987)DS(0.228)ES(0.785)VPR;EIQNGNLHES(0.999)DS(0.054)ES(0.948)VPR;EIQNGNLHES(0.953)DS(0.203)ES(0.845)VPR 100.64 6.1395e-09 13531800.0 1595.92 1876.7700000000002 1550.5300000000002 1507.5 2459.06 2174.87 1670.59 2309.07 2970.06 2376.55 2351.63 True False 1865.2722795021273 1972.289576667199 1770.418469144875 1876.8375676742473 2097.3355314970845 2405.0132998381346 1974.1145785327785 2636.3877437302986 2297.346152211222 1839.685704414343 1767.655369313773 1.055223949126605 1.1157658958334553 1.001563143969729 1.0617666770660508 1.186507035198438 1.3605668512023315 1.116798337958352 1.491460263973163 1.2996572703552967 1.0407490828534824 1.0 10.787621311966783 -6.7605493817531785 7.729134552315243 1.189082350212362 1.0583132567167592 0.21962156388942666 0.13570693178738255 0.20529546907513202 86.09422932166007 0.023040494220312194 0.04590747344528214 1.7356039036139964e-07 6.7605493817531785 -0.13076909349560273 EIQNGNLHES(ph)DSES(ph)VPR ddPTM_A549_PD325901_60min_R1 1 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 2 EIQNGNLHES(0.951)DS(0.292)ES(0.757)VPR 52.861999999999995 0.01757 2844600.0 833.88 372.51 458.82 598.83 609.73 403.94 509.09 616.0 544.02 526.45 484.27 True False 918.5348837299896 403.90272502395857 489.95828430879544 635.8183690583949 566.9046682543084 400.65044656588015 528.4636985347371 603.7133967573487 521.1567312805104 493.2098571554809 424.7078600404593 2.1627451953502494 0.9510130681016387 1.153636017619547 1.497072291051605 1.3348108702304282 0.9433553843993201 1.2442993131429063 1.4214792179731184 1.22709462271516 1.161292039917735 1.0 8.730326998569435 -5.254004431856769 24.892990355114605 1.1612399170251182 2.1627456993412744 0.7130458760828147 0.17570524758579964 357.16094780006273 1195781.7188986426 0.025838035009360848 0.372235213564618 5.571800630323009e-06 5.254004431856769 1.0015057823161562 EIQNGNLHES(ph)DSESVPR ddPTM_A549_MK2206_60min_R1 6 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 EIQNGNLHES(0.999)DS(0.001)ESVPR;EIQNGNLHES(1)DSESVPR;EIQNGNLHES(1)DSESVPR;EIQNGNLHES(1)DSESVPR;EIQNGNLHES(0.999)DS(0.001)ESVPR;EIQNGNLHES(0.999)DS(0.001)ESVPR 329.79 6.079799999999997e-195 832891000.0 10496.65 11148.300000000001 9569.869999999999 10604.19 11482.199999999999 9882.33 9819.32 11417.83 15689.699999999999 15139.999999999998 16764.1 True False 12268.227901546446 11715.700851760701 10927.02146705673 13202.217026040178 9793.183590378367 10928.071601240259 11603.363340663178 13036.342368137868 12136.008001302469 11719.863484813339 12601.111304377388 0.9735830122605691 0.9297355263968574 0.8671474446274344 1.0477025959967496 0.7771682476113357 0.8672307812600666 0.9208206371951011 1.034539101611561 0.9630902948287307 0.9300658649639957 1.0 13.621263351577417 -8.10856389418623 7.098148874800418 0.9858827195752722 0.9082923939111106 0.19662906023627036 0.06805269584832285 0.279725383472303 16.24209051367862 0.0101810119497653 0.013176195768515402 7.788182249848577e-09 8.10856389418623 -0.07759032566416157 EIQNGNLHES(ph)DSESVPR ddPTM_A549_PD325901_60min_R1 4 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 EIQNGNLHES(1)DSESVPR;EIQNGNLHES(0.991)DS(0.009)ESVPR;EIQNGNLHES(1)DSESVPR;EIQNGNLHES(0.999)DS(0.001)ESVPR 333.41 4.307499999999999e-195 1181997000.0 8698.8 8949.099999999999 10148.9 11529.8 13543.9 12661.7 10685.0 11729.599999999999 11859.0 13551.199999999999 12302.8 True False 9581.895772281894 9703.272063869183 10837.66538429348 12241.96955992433 12592.623187918465 12558.58731317325 11091.623522056347 11495.643926306811 11360.607470783387 12695.574919337732 10789.633593874822 0.8880649828295791 0.899314326056229 1.0044516609392486 1.1346047531098726 1.1671038759895596 1.1639493782534605 1.0279888955963215 1.0654341341890226 1.052918745751728 1.1766456023627063 1.0 13.397358252598249 -5.847897147518865 3.620478219816178 1.054914644577217 0.8907720706259323 0.5212211093607666 0.06729497139430489 0.15036286683927189 3.7857496895047356 0.009507139117123205 0.03490346009859737 1.4193936320411015e-06 5.847897147518865 -0.16414257395128473 EIQS(ph)GSSSSDAEESSEDNKKK ddPTM_A549_PD325901_60min_R1 1 EIQSGSSSSDAEESSEDNKKK 21 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 EIQS(0.2)GS(0.2)S(0.2)S(0.2)S(0.2)DAEESSEDNKKK 48.477 0.016434 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EIQSGSSSS(ph)DAEESSEDNK ddPTM_A549_PD325901_60min_R1 1 EIQSGSSSSDAEESSEDNK 19 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 EIQSGS(0.005)S(0.032)S(0.127)S(0.835)DAEESSEDNK 151.57 3.0431e-21 1797800.0 1020.2 948.5 653.91 825.71 899.91 919.02 900.76 832.07 791.5 1003.7 1299.0 True False 1123.7699529684548 1028.4334237610399 698.2882648802673 876.7122313765299 836.7034261209627 911.5358058201099 935.0389147147848 815.4737111037123 758.2360075153928 940.3262107074864 1139.2312350394538 0.9864283197339971 0.902743351945949 0.6129469096377823 0.7695647770280523 0.7344456510551925 0.8001323855806514 0.820763060172242 0.7158105273293975 0.6655681341893102 0.8254041688691244 1.0 10.153844891924155 -10.9601321164317 1.2325035839155234 0.999645944777039 0.7655258362920055 0.10730615950995892 0.11093935394391183 0.3716014994454526 1.0061504863926838 0.0727871112937947 0.017007075859309044 1.0961446879806936e-11 10.9601321164317 -0.2341201084850335 EIQSGSSSS(ph)DAEESSEDNKKK ddPTM_A549_MK2206_60min_R1 1 EIQSGSSSSDAEESSEDNKKK 21 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 EIQSGS(0.002)S(0.014)S(0.159)S(0.824)DAEESSEDNKKK 108.64 1.0495000000000001e-10 6860700.0 900.07 878.82 987.79 1128.7 1468.8 1130.5 1100.8 787.52 1689.1 1151.9 1237.6 True False 1051.9798114012483 923.5481842562848 1127.8734752869125 1405.2315506692685 1252.7414657075947 1250.1287596348348 1300.801111014004 899.1533716788512 1306.5215469384375 891.6849899707059 930.2697639776349 1.1308330681448866 0.9927745907890094 1.2124154938287646 1.510563500054864 1.346643214922024 1.3438346682252158 1.3983052673367091 0.9665512161055986 1.4044544900094682 0.9585230268670147 1.0 9.861505326122419 -11.01333765131794 1.255585581822066 0.9978247343934793 1.2716613793412619 0.2882229907478312 0.1648692345260863 0.5350883643252934 1.4820678862999612 0.1269191428306003 0.027788391759129918 9.697557172379277e-12 11.01333765131794 0.2738366449477826 EIQSGSSSS(ph)DAEESSEDNKKK ddPTM_A549_PD325901_60min_R1 2 EIQSGSSSSDAEESSEDNKKK 21 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 EIQSGSS(0.001)S(0.031)S(0.968)DAEESSEDNKKK;EIQSGSS(0.001)S(0.21)S(0.789)DAEESSEDNKKK 143.9 2.8077999999999996e-22 35468000.0 3056.9 2997.3 3024.5 2969.8 3672.0 3750.8 3499.1000000000004 3749.1000000000004 3259.6000000000004 3934.7 3864.3 True False 3367.2342376291617 3249.8929900252647 3229.7607577959816 3153.2378010948373 3414.0913877122957 3720.254728373776 3632.26016528099 3674.321259387949 3122.6103475643404 3686.2623704998955 3389.015597815984 0.9935729536916681 0.9589489620878772 0.9530085255073383 0.9304288251511468 1.0073991367618584 1.0977390398472215 1.0717744018710809 1.0841854082217346 0.9213915538118721 1.087708883038328 1.0 11.726650561448581 -4.907884756616468 12.26816194531126 0.9847357276873302 1.1123197287640496 0.0 0.06756755215619689 16015458.27603073 50566003.88708865 0.009384362273211398 52463839.972510755 1.236275445127333e-05 4.907884756616468 0.1275840010767194 EIQSTLEGDRGS(ph)GNWR ddPTM_A549_MK2206_60min_R1 4 EIQSTLEGDRGSGNWR 16 1 J3QRV5;Q6P1M3 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 EIQSTLEGDRGS(1)GNWR;EIQS(0.001)T(0.006)LEGDRGS(0.993)GNWR;EIQSTLEGDRGS(1)GNWR;EIQSTLEGDRGS(1)GNWR 215.98 5.134399999999999e-47 66357100.0 7094.92 6310.6 4694.139999999999 4208.9 9747.400000000001 7725.3 6983.490000000001 7490.2 10300.2 11186.8 10064.0 True False 8292.369041860022 6631.782585248076 5359.83963725418 5240.080688944702 8313.570372302702 8542.786118360882 8252.299737241263 8551.95878777546 7967.221146039485 8659.694110429973 7564.831047730211 1.0961737267546914 0.8766597090410775 0.7085207327746431 0.6926897184989956 1.0989763445935976 1.1292765250750842 1.0908769389790038 1.130489066288061 1.053192212194879 1.1447306695670711 1.0 12.885092146440034 -6.7780730682789665 24.999961000675498 1.0510953767236755 0.8362365548933662 0.5211295183875935 0.11028557398050354 162.1175136195931 243657.80415523308 0.016128969362818563 0.0305403402089917 1.6669667285891865e-07 6.7780730682789665 -0.21485882183030924 EIQSTLEGDRGS(ph)GNWR ddPTM_A549_PD325901_60min_R1 2 EIQSTLEGDRGSGNWR 16 1 J3QRV5;Q6P1M3 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 EIQSTLEGDRGS(1)GNWR;EIQSTLEGDRGS(1)GNWR 193.54 1.0189999999999998e-35 104569000.0 8093.3 6185.200000000001 6971.5 6311.900000000001 5338.8 6203.1 5314.0 4719.4 8070.700000000001 6928.0 9504.8 True False 8914.92585802744 6706.4485109612915 7444.627913035102 6701.771727635032 4963.8211058601355 6152.58401023125 5516.227177932376 4625.267864702322 7731.51654561527 6490.5648976601215 8335.769855891458 1.0694784059719034 0.8045385881450873 0.8930942242573402 0.8039775381872416 0.5954844233555542 0.7380942752255569 0.6617537759915099 0.5548699093981498 0.9275107973561529 0.7786401268111782 1.0 13.025099731142765 -8.970579946091721 20.878839752933768 0.968020511338267 0.7607245179858452 0.11152351421810258 0.14570098952677746 25.748231363531392 18273.544316268286 0.024060016510902508 0.025252773603358668 1.070089379859659e-09 8.970579946091721 -0.20729599335242188 EIQTAVR ddPTM_A549_MK2206_60min_R1 4 EIQTAVR 7 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q96A08;Q16778;P33778;P23527;P06899 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J 0 ;;; 143.61 0.012981999999999999 280836000.0 28492.7 29638.4 26814.9 24300.0 33969.2 26335.0 26068.1 26467.800000000003 39028.5 38297.2 38854.9 False True 33301.571180366365 31146.867964158173 30617.656032629435 30253.501090868453 28972.37567872713 29121.7522202418 30804.336339048077 30219.691704237986 30188.60706570767 29645.835921439455 29206.155989313673 1.1402243825771243 1.0664487300401528 1.048328853815347 1.0358604227799781 0.9919955124983897 0.9971100692229832 1.0547206674619956 1.0347028111229413 1.0336384930886993 1.015054358138971 1.0 14.833984867805782 -4.868898789454927 0.9231918602819947 1.0180852751535199 1.2993700363077667 0.7880788873493251 0.018329431094832954 1.3935582045615789 0.5463957834621204 0.003163403303309692 0.4665465664069641 1.352387694869919e-05 4.868898789454927 0.28128476115424683 EIQTAVR ddPTM_A549_PD325901_60min_R1 2 EIQTAVR 7 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q96A08;Q16778;P33778;P23527;P06899 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J 0 ; 143.61 0.012981999999999999 415320000.0 17895.7 16750.0 17535.0 17698.0 20669.7 19407.4 18120.9 19824.1 20672.3 19460.6 20825.8 False True 19712.45828988195 18161.58128413011 18725.03054652092 18791.165264925723 19217.93157859393 19249.35256890296 18810.500765636967 19428.69277379441 19803.51512085972 18231.854394833226 18264.358625623292 1.0792855470012017 0.9943727921905237 1.0252224526653428 1.0288434239658089 1.0522094956913985 1.0539298402681279 1.029902070541228 1.0637489753698584 1.0842710399409878 0.9982203464432381 1.0 14.156743472210286 -6.73453613565935 22.000928045447214 1.0435352040520083 1.028769087887683 0.006597800136043608 0.030351743372365295 186.76059502505572 152724.74710174536 0.004966133170979788 0.01033341556870124 1.8427391566866902e-07 6.73453613565935 -0.014766116164325327 EIQTLLSHKT(ph)PK ddPTM_A549_MK2206_60min_R1 1 EIQTLLSHKTPK 12 1 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 EIQTLLS(0.421)HKT(0.579)PK 65.092 0.0034214 1464700.0 1635.4 2047.0 1797.1 1829.6 3353.6 2164.2 2442.4 2255.4 3240.8 3150.0 3018.3 True False 1911.4155383088005 2151.183556556081 2051.955802790178 2277.8520821338648 2860.289882487058 2393.2142075203087 2886.1524650623196 2575.109856872817 2506.763974494162 2438.4128122299876 2268.772809157801 0.8424887369036936 0.9481705474752359 0.9044342362124358 1.0040018431724038 1.2607211576856108 1.0548496516972548 1.272120528513253 1.1350232365614132 1.104898632589266 1.0747717014182478 1.0 11.147696432010004 -6.470221931082354 4.90311217106707 1.0883665649076832 0.9078025319988958 0.5560552231415153 0.086084038602003 0.1613372114298041 8.370523785361657 0.013719869870657615 0.03202080629094174 3.386710458590999e-07 6.470221931082354 -0.18056403290878742 EIQVQHPAAK ddPTM_A549_PD325901_60min_R1 2 EIQVQHPAAK 10 0 B4DUR8;P49368;Q5SZX9;E9PRC8;Q5SZX6 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 ; 66.595 0.013567 4321800.0 2844.3 2758.6 2961.6 2718.4 3391.5 3256.8 3273.1 3119.9 3130.7 3668.7 4215.4 False True 3133.0512421370076 2991.076903307542 3162.5919855475536 2886.309394065663 3153.2927400398316 3230.277700588597 3397.659611609046 3057.671146985798 2999.127566302515 3437.0576558957423 3696.9325236222585 0.8474732016659153 0.8090699205883481 0.8554638109674889 0.7807308831370431 0.8529484159884617 0.8737724261798447 0.9190483163809589 0.8270832987749228 0.8112475808360079 0.9297052715823196 1.0 11.852112996371194 -10.813154340142487 0.874207602873686 1.0082747655853643 0.8405913719221288 0.562979979848727 0.040114314366068875 0.2863475437976703 0.35632383511937843 0.03283593970417464 0.006711456025369888 1.5376081060097058e-11 10.813154340142487 -0.16768339366323548 EIRPALELLEPIEQK ddPTM_A549_PD325901_60min_R1 2 EIRPALELLEPIEQK 15 1 P50395-2;P50395 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 ; 67.115 0.0031421999999999995 1719430.0 1612.13 1704.6 1681.4299999999998 1556.58 2286.3 1648.51 1619.8400000000001 2068.15 1998.0700000000002 2106.0 1975.17 False True 1775.7922508126205 1848.2526242942206 1795.541951059974 1652.7264113503275 2125.718175306814 1635.0850811217476 1681.4838976104593 2026.8991258177125 1914.0980663755927 1973.0268005877915 1732.2366116342412 1.0251441626887725 1.066974691494672 1.0365454343826672 0.9540996883740371 1.2271523191634606 0.943915554110799 0.9707010499126327 1.1701052340104268 1.1049864975257497 1.1390053687448518 1.0 10.758420290429187 EIS(ph)DDEAEEEK ddPTM_A549_MK2206_60min_R1 2 EISDDEAEEEK 11 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEK;EIS(1)DDEAEEEK 96.745 0.00028103 28847000.0 1263.28 1644.87 1453.0300000000002 1717.7199999999998 2576.3 2179.5 2223.8 2660.7 2459.0 1876.48 1944.59 True False 1476.4907797693165 1728.586857192184 1659.091503048363 2138.5614771113796 2197.329682803973 2410.1332433649895 2627.835674666551 3037.8623730520103 1902.0404262161017 1452.5818647280407 1461.6946350462742 1.0101225963127203 1.1825909569254596 1.135046584470661 1.463069936658608 1.503275465421962 1.6488623448280562 1.7978007250354031 2.0783153335962252 1.301257034548729 0.9937656128032891 1.0 10.513426231712327 -9.557594904727807 1.604933632552259 1.078250876113611 1.472072892492847 0.25905095510988374 0.29497633923163796 0.3785098979090159 1.9753237883989307 0.07678719171563383 0.060518869052952146 2.7695237594965736e-10 9.557594904727807 0.3938220163792361 EIS(ph)DDEAEEEK ddPTM_A549_PD325901_60min_R1 4 EISDDEAEEEK 11 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEK;EIS(1)DDEAEEEK;EIS(1)DDEAEEEK;EIS(1)DDEAEEEK 176.05 2.118e-15 67180000.0 6854.95 6988.95 9332.14 6954.48 7309.93 6020.7 6581.4400000000005 6583.360000000001 6629.3 6786.58 6495.47 True False 7550.859477652529 7577.933344222157 9965.475139116605 7384.042434829967 6796.505734689472 5971.669415356726 6831.900300702158 6452.049720253993 6350.693575011747 6358.074180595011 5696.568368176847 1.32551020011178 1.3302628625604347 1.7493821709904267 1.296226422222891 1.1930877144663592 1.0482924156087894 1.1993010281185597 1.1326204309769274 1.1148279393062475 1.1161235624088324 1.0 12.475877381289857 -6.744694720017803 2.4920809612968404 1.0754517194212236 1.4595629629198104 0.6201682663348578 0.12002527606477166 0.1271527117147623 1.6114631202929346 0.017752969293433497 0.03932766004993638 1.8001358456314706e-07 6.744694720017803 0.3841112434985867 EIS(ph)DDEAEEEKGEK ddPTM_A549_MK2206_60min_R1 2 EISDDEAEEEKGEK 14 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK 157.12 1.5028e-19 55022000.0 9180.3 8735.9 8157.7 7734.3 13453.4 10662.099999999999 9537.900000000001 10483.8 15131.900000000001 9288.099999999999 9664.6 True False 10729.710203214066 9180.519995954211 9314.584526415572 9629.203847205923 11474.422681611219 11790.356345070826 11270.812969422666 11969.910755290966 11704.548810678918 7189.911759134395 7264.613090609444 1.4769830229615062 1.2637314446685883 1.28218590725169 1.3254943831286834 1.5794953617617375 1.6229847616126392 1.5514677559348358 1.6477010690030822 1.6111730473036106 0.9897170942838496 1.0 12.826670247403442 -10.815865687611154 1.0671346216839692 1.0005672390410838 1.4878529779758245 0.6663126263078586 0.13297210685216357 0.29143878377201005 0.5902325680234108 0.10540796495041924 0.02627883200227654 1.5280385550908008e-11 10.815865687611154 0.4872857389347407 EIS(ph)PGSGPGEIR ddPTM_A549_MK2206_60min_R1 1 EISPGSGPGEIR 12 0 O43491;O43491-4;E9PHY5;E9PK52;H0Y5B0;Q6R5J7;E9PMG5;E9PMV8 O43491 EPB41L2 Band 4.1-like protein 2 1 EIS(0.723)PGS(0.277)GPGEIR 160.16 5.8668e-14 17433000.0 2160.4 2937.2 2377.9 2835.1 4238.9 3443.2 2784.6 3661.2 4168.1 4567.8 4369.2 True False 2525.0227032911425 3086.690934204457 2715.121976214324 3529.6996272724737 3615.363425236877 3807.557138588819 3290.525775553774 4180.186311954757 3224.032005087977 3535.930807525122 3284.207056214512 0.7688378534213276 0.9398588095606497 0.826720706015371 1.0747494195268323 1.1008329753130934 1.1593535588397212 1.0019239710624535 1.2728144847155225 0.9816774490473524 1.0766467360315446 1.0 11.681329370839054 -6.259418726525776 24.946947270775144 1.0363239704866882 0.8546110838958253 0.5162576377629868 0.09497321652131151 136.6320526732546 1686838.4981981765 0.014040314303799909 0.03525299587525279 5.50276889192086e-07 6.259418726525776 -0.18171288659086293 EIS(ph)PGSGPGEIR ddPTM_A549_PD325901_60min_R1 1 EISPGSGPGEIR 12 0 O43491;O43491-4;E9PHY5;E9PK52;H0Y5B0;Q6R5J7;E9PMG5;E9PMV8 O43491 EPB41L2 Band 4.1-like protein 2 1 EIS(0.629)PGS(0.371)GPGEIR 159.77 6.172200000000001e-14 22909000.0 6000.4 5527.3 5055.1 5930.0 6188.6 6177.8 5707.6 6136.6 6152.8 6340.7 7559.3 True False 6609.556190738991 5993.104969061035 5398.169484785737 6296.2826319928545 5753.9340855109795 6127.490045043065 5924.805841318564 6014.200698930432 5894.21921293836 5940.347119889365 6629.554022350842 0.9969835328976232 0.9039982099634325 0.8142583145995006 0.9497294404368078 0.8679217434705558 0.924268815728008 0.8936959894049744 0.9071802837195667 0.8890823112786503 0.896040231343181 1.0 12.694696106525779 -10.752376506215617 0.8402514574525769 1.004642626665062 0.9021829153935506 0.0 0.05313333500389857 0.5272086822223685 0.6119662383730713 0.03552142396297005 0.007597345994215359 1.768575049304016e-11 10.752376506215617 -0.10245971127151154 EIS(ph)PQKNGPEEVKPLGEVETDLK ddPTM_A549_MK2206_60min_R1 1 EISPQKNGPEEVKPLGEVETDLK 23 2 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1;A6H8Y1-4;A6H8Y1-3;A6H8Y1-5 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 1 EIS(1)PQKNGPEEVKPLGEVETDLK 44.555 0.007860800000000001 3974700.0 1192.1 1400.7 1417.8 1408.9 1906.9 1413.7 1344.1 1272.6 2228.2 1874.9 2262.8 True False 1393.2973359532357 1471.9896471265768 1618.865359298822 1754.0805632479248 1626.3975360551544 1563.296795661889 1588.3055716877918 1452.9949471740465 1723.5162577042368 1451.3587878253973 1700.8843098970515 0.8191605553922519 0.8654260836915305 0.9517786423679846 1.0312756446992524 0.9562070310082375 0.9191082465547054 0.9338116428294446 0.854258539936788 1.0133059889349882 0.8532965936485374 1.0 10.732069300317157 -2.5937414585983465 0.3080416940949387 0.996889381576042 2.3000711795830198e-97 0.0 0.06899795410182243 25.33111974150682 0.4444742783719391 0.01895924784965999 13.373412397453464 0.002548346866599326 2.5937414585983465 -0.996889381576042 EIS(ph)PQKNGPEEVKPLGEVETDLK ddPTM_A549_PD325901_60min_R1 1 EISPQKNGPEEVKPLGEVETDLK 23 2 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1;A6H8Y1-4;A6H8Y1-3;A6H8Y1-5 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 1 EIS(1)PQKNGPEEVKPLGEVETDLK 52.971000000000004 0.0015047 7099600.0 1458.1 1239.6 1136.7 1772.7 1714.9 1424.8 1427.3 1625.5 1599.3 1907.2 1873.2 True False 1606.1252386035128 1344.0654423765775 1213.843297532382 1882.1956529061965 1594.4513400838289 1413.1969011909343 1481.6166825485286 1593.078127319918 1532.0869827155634 1786.7790665152108 1642.8082751931531 0.9776705309173541 0.8181511273544986 0.7388831161017035 1.1457183904706698 0.9705644682708707 0.8602323974931145 0.9018804597720496 0.9697285747678692 0.9326024258889422 1.0876370015272356 1.0 10.681948404287978 EIS(ph)PYENK ddPTM_A549_MK2206_60min_R1 2 EISPYENK 8 0 Q8NG31-4;Q8NG31-2;Q8NG31;H0YCZ2 Q8NG31-4 CASC5 Protein CASC5 1 EIS(0.947)PY(0.053)ENK;EIS(1)PYENK 96.34200000000001 0.0024873 13464700.0 5274.9 4708.5 3815.5 3830.8999999999996 5497.6 4642.8 4544.3 4383.200000000001 6364.5 5690.4 6521.7 True False 6165.174161076852 4948.142538370449 4356.595273243518 4769.470671975637 4688.9103226266825 5134.098014358787 5369.940487628028 5004.532022987026 4922.950912018047 4404.934687845561 4902.1819002367 1.2576387997310277 1.009375547270396 0.8887053483333944 0.9729281305831072 0.9564945605956157 1.047308753294301 1.0954184477260507 1.0208784832617868 1.0042366872963944 0.8985661441149032 1.0 12.259208302465487 EIS(ph)PYENK ddPTM_A549_PD325901_60min_R1 2 EISPYENK 8 0 Q8NG31-4;Q8NG31-2;Q8NG31;H0YCZ2 Q8NG31-4 CASC5 Protein CASC5 1 EIS(0.977)PY(0.023)ENK;EIS(0.997)PY(0.003)ENK 83.86200000000001 0.0032711999999999997 22919800.0 14918.5 18383.4 15061.7 15068.6 18626.9 16015.6 15290.5 16334.400000000001 14955.7 19824.6 19929.7 True False 16433.01513758076 19932.633634547914 16083.8775353598 15999.353198726398 17318.610803316493 15885.174263555265 15872.388344782641 16008.597577911087 14327.163938847705 18572.871372712598 17478.473244777382 0.9401859594625059 1.140410455501532 0.920210667723264 0.9153747569746717 0.990853752543366 0.90884221070635 0.9081106869288686 0.9159036578148781 0.8197033996163654 1.0626140574527712 1.0 14.09329154960612 -5.848422979515729 12.286300268562742 0.9178045250657748 1.0402168789599429 0.176514848876845 0.07562928703219507 0.4669655065603853 63.26495004287933 0.010177133641656655 0.031667777270373766 1.4176761086475236e-06 5.848422979515729 0.12241235389416805 EIS(ph)QDSLAAR ddPTM_A549_MK2206_60min_R1 2 EISQDSLAAR 10 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 EIS(1)QDSLAAR;EIS(0.999)QDS(0.001)LAAR 122.33 3.717e-05 8672800.0 1233.2 1682.96 1020.8499999999999 861.98 1663.27 1217.1399999999999 882.97 1013.8499999999999 2160.3 1810.0900000000001 2071.6099999999997 True False 1441.3340111547097 1768.615475496639 1165.6218804064058 1073.165138695752 1418.6051863204466 1345.9369469278572 1043.3942196511946 1157.5663422854068 1670.995499290219 1401.1894118378984 1557.1720634726148 0.9256099855403409 1.1357868003054774 0.7485504702717171 0.6891756947543165 0.911013766299433 0.8643469649245524 0.6700571145133084 0.7433772859397078 1.0730962483129636 0.8998295337466671 1.0 10.604712651945759 -8.77116463573835 24.998487541584865 1.034517684985881 0.8360894996417294 0.19697072605725763 0.13158968628821588 173.35670586788635 445607.01065200916 0.022851931400356594 0.024474555061814528 1.6936956193925469e-09 8.77116463573835 -0.19842818534415163 EIS(ph)QDSLAAR ddPTM_A549_PD325901_60min_R1 2 EISQDSLAAR 10 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 EIS(0.999)QDS(0.001)LAAR;EIS(0.995)QDS(0.005)LAAR 131.17 1.1406e-06 12426500.0 1711.21 2092.5 1949.99 1774.94 2012.1399999999999 2271.3 2029.13 2034.93 2625.4 2249.0 2685.1 True False 1884.930779473779 2268.8423186293894 2082.328047642447 1884.5740126187857 1870.81422790616 2252.803285847115 2106.34965253254 1994.3417247782982 2515.0635680744317 2106.9977561832584 2354.8497222512983 0.8004463136916167 0.9634764788558636 0.8842721588414936 0.8002948106671891 0.7944516417453648 0.9566654145952787 0.8944730666374813 0.8469082786614744 1.0680356985455381 0.8947482874486415 1.0 11.201419280007363 -8.758797416403574 24.99999774138645 1.0321279731596114 0.8705532589207278 0.3189370905578939 0.07019902748777217 33.022687895306504 312482.0743561296 0.010072560026996453 0.011168356217274043 1.7426195565527794e-09 8.758797416403574 -0.1615747142388836 EIS(ph)SPARPCSFEEAMK ddPTM_A549_MK2206_60min_R1 1 EISSPARPCSFEEAMK 16 1 O94916-2;O94916;O94916-4;O94916-5 O94916-2 NFAT5 Nuclear factor of activated T-cells 5 1 EIS(0.5)S(0.5)PARPCSFEEAMK 52.298 0.0049465 3464200.0 1542.6 2004.1 1616.4 1518.8 2196.3 1884.0 1691.6 1640.0 2471.3 2143.2 2416.6 True False 1802.95316705097 2106.1001297967964 1845.6298256246412 1890.9060681815236 1873.227179421017 2083.3636295020156 1998.9418235749356 1872.475022289358 1911.5544958551654 1659.0496314829559 1816.491525232992 0.9925469742115722 1.159432951126297 1.0160409778889068 1.0409660831965548 1.031233646510268 1.1469162396641477 1.1004410402181986 1.0308195751418028 1.0523332860636276 0.9133263813439252 1.0 10.826938919596406 -10.010216985065881 0.6499693215705162 1.0013747440803882 1.0681012367611025 0.28318240331070066 0.057057307644577705 0.8760549396719869 0.7346149017474528 0.02813987142448716 0.010817043316302918 9.767490892190613e-11 10.010216985065881 0.06672649268071429 EIS(ph)SS(ph)PTSK ddPTM_A549_MK2206_60min_R1 2 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 EIS(0.927)S(0.113)S(0.96)PTSK;EIS(0.906)S(0.113)S(0.907)PT(0.056)S(0.018)K 107.03 0.00057892 112618000.0 26035.0 27580.0 24513.0 21953.7 32701.0 25703.0 23182.0 27084.0 35274.0 34887.0 38284.0 True False 30429.071505362346 28983.704196295414 27989.31199921853 27332.357485539036 27890.726218752745 28422.874399729462 27393.86932733161 30923.23994127133 27284.495321003164 27006.002469926214 28777.0262153521 1.0574084784733213 1.0071820479085172 0.9726269764554986 0.9497978450239464 0.9692011262745931 0.9876932448484305 0.9519353779758314 1.074580803098211 0.9481346375688849 0.9384570270683121 1.0 14.812629892891314 -5.378302730814038 2.5903909532962346 0.9786853153803158 1.0640377985903073 0.30690901794270253 0.035683273704662406 0.34459357654630346 3.4324507262598516 0.004674192659485836 0.05620189907264828 4.1850174114829065e-06 5.378302730814038 0.08535248320999156 EIS(ph)SS(ph)PTSK ddPTM_A549_PD325901_60min_R1 3 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 EIS(0.872)S(0.17)S(0.909)PT(0.041)S(0.008)K;EIS(0.825)S(0.282)S(0.809)PT(0.074)S(0.01)K;EIS(0.817)S(0.194)S(0.703)PT(0.034)S(0.252)K 113.67 0.00026259 187339000.0 44636.7 44977.1 44992.1 46193.3 56391.5 47125.2 49149.7 45840.7 48072.6 52197.0 55364.6 True False 49168.1849241982 48767.47806414618 48045.534465476136 49046.555228403966 52430.75558011385 46741.42799551028 51020.11872924782 44926.37127716652 46052.27579896964 48901.27251200425 48555.105185115746 1.012626473297609 1.0043738527230197 0.9895053111779518 1.0101214906530338 1.0798196272095846 0.9626470340720952 1.0507673402154982 0.9252656565336493 0.948453836592381 1.0071293703425983 1.0 15.56733537113703 -8.253572564766953 24.993267647479183 0.971199150513943 1.0144634871188463 0.27608209540872153 0.03537973920755394 623.7727423619856 1981757.6966223007 0.005666712931694172 0.007248685044395505 5.577344044375524e-09 8.253572564766953 0.04326433660490325 EISPGS(ph)GPGEIR ddPTM_A549_MK2206_60min_R1 1 EISPGSGPGEIR 12 0 O43491;O43491-4;E9PHY5;E9PK52;H0Y5B0;Q6R5J7;E9PMG5;E9PMV8 O43491 EPB41L2 Band 4.1-like protein 2 1 EIS(0.131)PGS(0.869)GPGEIR 155.48 9.5373e-14 15168000.0 3472.1 4224.4 3150.8 3254.5 4512.1 3861.1 3356.5 3463.3 5308.1 6030.3 4630.3 True False 4058.105595305115 4439.403916128729 3597.6308182245252 4051.8526461000547 3848.376067142727 4269.679039209253 3966.332602760267 3954.2333809114243 4105.823825293897 4668.051041774762 3480.468720221105 1.165965253969389 1.2755189812039758 1.033662735516835 1.1641686714663684 1.1057062644419486 1.2267540329849629 1.139597255885781 1.1361209362227 1.1796755423887462 1.3412133298753546 1.0 11.765065893840308 -10.778339901789701 0.7850979463137475 0.9881287707074934 1.159606846107963 0.0 0.11728102025882445 0.49723344734389924 0.4812909173989755 0.05471791496855529 0.010550484218499117 1.6659428473609022e-11 10.778339901789701 0.17147807540046955 EISPGS(ph)GPGEIR ddPTM_A549_PD325901_60min_R1 1 EISPGSGPGEIR 12 0 O43491;O43491-4;E9PHY5;E9PK52;H0Y5B0;Q6R5J7;E9PMG5;E9PMV8 O43491 EPB41L2 Band 4.1-like protein 2 1 EIS(0.244)PGS(0.756)GPGEIR 156.69 8.5896e-14 21262000.0 4584.0 5120.9 4501.9 5140.6 5654.2 4199.0 4341.0 4996.0 6013.9 5302.4 5507.2 True False 5049.364305437561 5552.456214800116 4807.426006123898 5458.123186850333 5257.068497931065 4164.804736174013 4506.199130486348 4896.35086071382 5761.156696900599 4967.605559086751 4829.849313017152 1.0454496565407918 1.14961272183698 0.9953573485547842 1.1300814648895754 1.088453936598497 0.8623053156025496 0.9329895900357554 1.0137688659390338 1.1928232794703215 1.0285218517476986 1.0 12.237762463629116 -11.448608009044996 2.3289656742828613 0.9989595382044685 1.072798835459606 0.0 0.09467400131944247 0.8370853906212914 8.223466891347252 0.08979177842175005 0.01582688106090008 3.5595245364566958e-12 11.448608009044996 0.0738392972551376 EISS(ph)S(ph)PTSK ddPTM_A549_PD325901_60min_R1 1 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 EIS(0.421)S(0.577)S(0.633)PT(0.085)S(0.284)K 73.885 0.0025301 9046800.0 4726.0 4565.2 4145.8 5188.6 5468.7 5003.9 4436.3 4161.6 5024.6 5475.3 5990.6 True False 5205.780040902685 4949.925425570793 4427.158918720638 5509.088037834423 5084.597377990804 4963.149897437758 4605.125824136508 4078.5936232879562 4813.433535517178 5129.588623579459 5253.794177542229 0.9908610548839571 0.9421620372434178 0.8426593751321454 1.0485922842930293 0.9677953125239145 0.9446791651361499 0.8765333525667018 0.7763139334087804 0.916182357522225 0.9763588846906686 1.0 12.359143967270006 -10.555417963691715 1.1268106145293162 0.99534504364149 0.9222360453635318 0.11185042727097783 0.06998357642774478 0.7222071866536712 1.7652820817548487 0.03524311131830216 0.012621675590098332 2.7834411039202257e-11 10.555417963691715 -0.07310899827795825 EISS(ph)SPTSK ddPTM_A549_MK2206_60min_R1 2 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EIS(0.043)S(0.457)S(0.457)PT(0.042)S(0.001)K;EIS(0.085)S(0.45)S(0.45)PT(0.015)SK 150.46 2.2563e-05 191096000.0 26361.0 26121.0 24282.0 20991.0 31884.0 24713.0 23848.0 23872.0 36346.0 34186.0 36848.0 True False 30810.09233542758 27450.447328188275 27725.552725697577 26133.795942321813 27193.9058364794 27328.113256838267 28180.87290648797 27255.92910493387 28113.689032635415 26463.35885679185 27697.6246469359 1.1123730907674063 0.9910758658224879 1.0010083203566256 0.9435392484175682 0.9818136458675627 0.9866590946043993 1.0174472816969715 0.9840529450582005 1.0150216630849442 0.9554378468956328 1.0 14.75747463535359 -11.64107157413156 3.444265189290958 0.9998700323095632 1.0037678602245352 0.005280052999610985 0.04162790526125287 4.411174072968771 96.39668074349851 0.03559845204863818 0.005241380739260769 2.2852221550946994e-12 11.64107157413156 0.003897827914972063 EISS(ph)SPTSK ddPTM_A549_PD325901_60min_R1 2 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EIS(0.095)S(0.425)S(0.425)PT(0.055)S(0.001)K;EIS(0.098)S(0.443)S(0.443)PT(0.013)S(0.002)K 165.63 2.3481e-06 261360000.0 30877.0 28829.0 30528.0 30311.0 36429.0 28540.0 31917.0 31877.0 28946.0 32572.0 36229.0 True False 34011.61030955398 31258.52100538431 32599.81365977703 32183.241628724383 33870.352713227454 28307.579702406852 33131.61890065255 31241.18822797726 27729.500282426503 30515.39836122769 31773.06267455302 1.070454260514011 0.9838057264281039 1.0260205002486635 1.012909644826272 1.0660084317384408 0.8909301565403808 1.0427581136894177 0.9832602084343057 0.8727361465419889 0.9604172777988886 1.0 14.955516540813571 -7.542233090304075 1.0088342609241199 0.943715963157813 1.0268740765476556 0.22609973199213707 0.0539996271131527 0.5532143819323538 1.1288602766834568 0.011011772584437557 0.02121001345989814 2.8692402180351445e-08 7.542233090304075 0.08315811338984258 EITALAPS(ph)TMK ddPTM_A549_MK2206_60min_R1 2 EITALAPSTMK 11 0 P60709;P63261;P63267-2;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 1 EITALAPS(0.98)T(0.02)MK;EITALAPS(0.997)T(0.003)MK 149.41 1.1795999999999999e-11 13814500.0 4878.299999999999 5087.1 5420.0 4352.2 6616.700000000001 4607.9 5059.9 5001.5 8046.2 7079.6 8785.3 True False 5701.6377770159115 5346.011661239105 6188.637499929201 5418.489195377683 5643.392195089487 5095.5049195235315 5979.2183335935315 5710.477941451356 6223.748547141114 5480.313443004258 6603.667548054874 0.8634047270740246 0.8095519076840544 0.9371515835548201 0.8205272533705474 0.8545845401850616 0.7716174205384437 0.9054390291580812 0.8647434020407934 0.942468484649009 0.829889361195734 1.0 12.689051776378216 -8.923907398919336 0.9747628585984365 0.9851227572032017 0.8466098178916801 0.030314333088693912 0.06335782298227795 0.19977101022795077 0.38787651050617405 0.009687738594255778 0.009376623141437487 1.1914960339544632e-09 8.923907398919336 -0.13851293931152164 EITALAPS(ph)TMK ddPTM_A549_PD325901_60min_R1 3 EITALAPSTMK 11 0 P60709;P63261;P63267-2;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 1 EIT(0.002)ALAPS(0.989)T(0.009)MK;EITALAPS(0.996)T(0.004)MK;EIT(0.001)ALAPS(0.965)T(0.034)MK 127.56 1.2026e-07 21923800.0 8472.5 9273.2 9866.5 9520.5 10018.599999999999 11034.0 10506.8 10540.1 10758.6 11445.0 11910.2 True False 9332.62196287515 10054.685108298236 10536.100022084329 10108.55966237572 9314.928098293687 10944.14276231104 10906.642023541566 10329.869436951507 10306.4534560393 10722.360746784076 10445.320904978375 0.8934739341925916 0.9626018386382024 1.0086908882868968 0.9677596078027483 0.8917799829255674 1.047755532057892 1.0441653370690909 0.9889470635629929 0.9867052960648736 1.0265228655324186 1.0 13.350569195641315 -7.269848999165894 24.987220598560455 1.000758572186489 0.9506650598561983 0.43779045206155265 0.03770004761656134 615.6973867434796 1829399.4218514904 0.005636069048977405 0.00910156137375933 5.372185506390295e-08 7.269848999165894 -0.05009351233029058 EITALAPSTMK ddPTM_A549_MK2206_60min_R1 6 EITALAPSTMK 11 0 P60709;P63261;P63267-2;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;;;; 211.78 1.7625999999999997e-30 79319410.0 25794.600000000002 29576.11 29947.800000000003 24832.500000000004 35443.80999999999 27506.91 27023.039999999997 27526.1 39535.4 37974.1 36386.6 False True 30148.097862578066 31081.407669220276 34194.84836169369 30916.46361477328 30230.07250113117 30417.672958590887 31932.776576104498 31428.008970145816 30580.695025060635 29395.724435842134 27350.803000928096 1.1022746886647186 1.136398359790957 1.2502319716365677 1.1303676756300058 1.105271845221706 1.1121308927404698 1.1675261079179622 1.1490707958036688 1.1180913051811656 1.0747664130681884 1.0 14.739295569731832 -10.370230824668127 0.48979708645713915 0.9801610674435739 1.149773728525993 0.41487789992413604 0.04461554819346511 0.6253675407168425 0.24033385361139412 0.0490046302836952 0.010611232774575317 4.2635285482628726e-11 10.370230824668127 0.16961266108241912 EITALAPSTMK ddPTM_A549_PD325901_60min_R1 6 EITALAPSTMK 11 0 P60709;P63261;P63267-2;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;;;; 212.21 1.6819e-30 216943300.0 73018.2 73678.2 78753.3 72416.1 91232.90000000001 81804.8 81458.7 87277.79999999999 82032.1 80687.49999999999 85327.8 False True 80430.95391084238 79887.32048766539 84097.97252006437 76889.07802810414 84825.01584041864 81138.608831095 84558.65540441083 85536.97581089042 78584.57611131204 75592.87747978502 74833.02153749009 1.0748056440638016 1.0675410246216397 1.1238083240823398 1.027475256890222 1.1335238655026474 1.0842620966526912 1.1299644684539214 1.1430378468419564 1.0501323412678518 1.0101540192642664 1.0 16.19138740762746 -9.242799494729233 1.7354710027051923 1.0156992944475227 1.096697307255196 0.5072872104331841 0.03430334024569645 0.1845697412497681 1.148371064582493 0.0072999993296726596 0.006581919405760651 5.717425380989788e-10 9.242799494729233 0.08099801280767327 EITSHEEGGGDVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EITSHEEGGGDVSPR 15 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EITSHEEGGGDVS(1)PR;EITSHEEGGGDVS(1)PR 79.805 0.000132 4759600.0 564.74 659.77 484.34 577.97 536.62 466.28000000000003 644.9300000000001 828.22 797.0 937.47 928.6600000000001 True False 660.054305432623 693.3494748944823 553.0266949659975 719.572675946059 457.68390885621574 515.621440108386 762.1054328908624 945.6227213173731 616.4807725474722 725.6948758988086 698.0480922878716 0.945571390746556 0.993268920228706 0.7922472693155532 1.0308353878421759 0.6556624305871882 0.7386617710227138 1.0917663715590729 1.354667008999436 0.8831494267492942 1.0396058436608915 1.0 9.447182624655348 -7.767170605770022 24.999669131161188 0.9906967391316088 0.860943433608772 0.25034816361553636 0.15727278785358736 233.850240823419 1020057.5528015312 0.026122435606266068 0.036624801041667036 1.7093436943426246e-08 7.767170605770022 -0.12975330552283681 EITSHEEGGGDVS(ph)PR ddPTM_A549_PD325901_60min_R1 1 EITSHEEGGGDVSPR 15 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EITSHEEGGGDVS(1)PR 73.498 0.00023982 3151900.0 371.77 392.28 343.92 332.01 584.57 389.1 251.91 404.18 703.78 451.78 549.76 True False 409.51181671739096 425.33881230677974 367.2604793589663 352.51750365058155 543.51181985702 385.931298605694 261.49657290044127 396.1183128269237 674.2025740608763 423.25453369874265 482.1430052157741 0.8493575812307421 0.8821839323717395 0.7617252047338231 0.7311471904333008 1.1272834283135176 0.8004498549822944 0.542363095744619 0.821578470581873 1.3983456500818663 0.877860985475301 1.0 8.913317307840014 -8.737204316379932 23.917117780944565 1.1881076284852314 0.8131137673911226 0.2786113543770615 0.18178950193180385 92.67718196274008 91461.09818671856 0.03217386825680448 0.036470762856807296 1.8314526020710066e-09 8.737204316379932 -0.3749938610941088 EIYNT(ph)IR ddPTM_A549_MK2206_60min_R1 2 EIYNTIR 7 0 E9PGC0;P20936-3;P20936-2;P20936-4;P20936 E9PGC0 RASA1 Ras GTPase-activating protein 1 1 EIYNT(1)IR;EIYNT(1)IR 74.376 0.019725 7889700.0 2695.8 2475.6000000000004 2347.2 2323.6000000000004 3033.1000000000004 2095.79 2174.8 2282.8999999999996 3309.0 3083.2 3034.8999999999996 True False 3150.785134017895 2601.597465857467 2680.068254581885 2892.88210431037 2586.9350079232754 2317.5651067271892 2569.933008932827 2606.5080660880344 2559.5167833871824 2386.702978624601 2281.2505710211085 1.3811657404243738 1.1404260009425304 1.1748241462936981 1.268112385837339 1.1339986237309039 1.0159186965988687 1.1265456945321448 1.1425785922856067 1.1219796789975243 1.046225701351295 1.0 11.155609204663953 -2.0000000000000004 0.1299528610960234 0.9802810052715005 1.9625226334751396 0.5801744634641824 0.06770669955480704 41.2522643361586 0.3485241348499877 0.19191981735252212 7.477640109420662 0.00999999999999999 2.0000000000000004 0.982241628203639 EIYNT(ph)IR ddPTM_A549_PD325901_60min_R1 1 EIYNTIR 7 0 E9PGC0;P20936-3;P20936-2;P20936-4;P20936 E9PGC0 RASA1 Ras GTPase-activating protein 1 1 EIYNT(1)IR 73.985 0.019913 4463400.0 1762.3 2194.8 1968.8 2104.0 2308.2 1938.6 2023.0 2420.5 2358.5 2700.8 2694.0 True False 1941.2073986633093 2379.7634986512694 2102.4146073561656 2233.959301469303 2146.0799948577146 1922.8126843407817 2099.9863720280778 2372.2212286544845 2259.380446904681 2530.2710270785874 2362.655078673047 0.8216211567172819 1.0072411839259379 0.889852533420561 0.9455291725121283 0.9083340239672357 0.8138355453140047 0.8888247764068493 1.0040488982364748 0.9562887394353099 1.0709438927072163 1.0 11.206193311938577 -8.255938893153106 24.771398651512904 0.980633600314994 0.8996349071572602 0.4348242259381969 0.05806990696333431 327.916994433886 1476772.6423559363 0.008108761578630901 0.010319036175572728 5.547037563463821e-09 8.255938893153106 -0.08099869315773378 EIYNT(ph)IRR ddPTM_A549_MK2206_60min_R1 2 EIYNTIRR 8 1 E9PGC0;P20936-3;P20936-2;P20936-4;P20936 E9PGC0 RASA1 Ras GTPase-activating protein 1 1 EIYNT(1)IRR;EIYNT(1)IRR 97.81299999999999 0.0015130999999999999 11638100.0 1635.67 1925.6100000000001 2119.19 1885.45 2634.7 2670.6 2151.96 1960.44 2831.7 2844.7 2669.4 True False 1911.7311077079332 2023.6153240546928 2419.7230080212116 2347.385334641068 2247.1391201659853 2953.2011193991934 2542.9432765785737 2238.338373595702 2190.3244712957035 2202.0802942700466 2006.5143083079336 0.9527622603000874 1.0085227479694279 1.2059335924007097 1.1698821807159632 1.119921802133057 1.4718066585279366 1.2673437044777436 1.1155357150098084 1.0916067043363247 1.097465532716301 1.0 10.970475728570326 -9.152573722464913 1.331325852270636 1.0276609226610653 1.1722527913300553 0.10445670529835005 0.13028960467156328 0.4991500625470061 1.826434354769413 0.03061510841122275 0.027814692965004485 7.037627524863253e-10 9.152573722464913 0.14459186866899 EIYNT(ph)IRR ddPTM_A549_PD325901_60min_R1 2 EIYNTIRR 8 1 E9PGC0;P20936-3;P20936-2;P20936-4;P20936 E9PGC0 RASA1 Ras GTPase-activating protein 1 1 EIYNT(1)IRR;EIYNT(1)IRR 112.13 0.00090321 15586500.0 2387.17 2439.89 2436.07 2585.22 3088.6 2567.52 2811.01 2518.08 3054.1200000000003 3686.8 3421.8 True False 2629.5137410583266 2645.508093094699 2601.39635947894 2744.9031679393865 2871.6673910915583 2546.6109683785435 2917.9845237936956 2467.854919004454 2925.765957388391 3454.014818806774 3000.9402925773716 0.8762299428489984 0.8815597230102142 0.8668604190204393 0.9146810333843443 0.9569225346450373 0.8486043440042503 0.9723567413224243 0.8223605531601315 0.9749497397949172 1.1509775210623325 1.0 11.551198899679777 -8.919128077918119 9.109398128258354 0.9889934743884006 0.8953265915713032 0.47175427160102346 0.06419954352808711 0.1607530202533824 16.580040839740484 0.00667467649738676 0.007091478706414038 1.204680615252179e-09 8.919128077918119 -0.09366688281709734 EKADFTVVAGDEGSSTTGGS(ph)SEENKGPSGSAVSR ddPTM_A549_MK2206_60min_R1 2 EKADFTVVAGDEGSSTTGGSSEENKGPSGSAVSR 34 2 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 EKADFTVVAGDEGS(0.001)S(0.023)T(0.113)T(0.113)GGS(0.583)S(0.142)EENKGPS(0.009)GS(0.009)AVS(0.006)R;EKADFTVVAGDEGS(0.001)S(0.035)T(0.12)T(0.12)GGS(0.58)S(0.12)EENKGPS(0.007)GS(0.008)AVS(0.008)R 108.49 5.6493000000000005e-15 11419600.0 1902.81 1945.2200000000003 1727.45 1754.23 2153.17 2062.26 1967.87 1494.74 3226.7 2830.8999999999996 2916.73 True False 2223.957808761995 2044.2233892936094 1972.4283854709774 2184.016428750377 1836.4415452870526 2280.486984382603 2325.40650647813 1706.6239724492664 2495.857601981088 2191.397723854562 2192.4254433471942 1.0143824117305718 0.9324026937822234 0.8996558544128436 0.9961645151390056 0.8376301008819447 1.040166264856407 1.0606547709681349 0.7784182479855504 1.1384002176925303 0.9995312408475505 1.0 11.098312067198842 -8.802175436283486 24.999999273747633 1.0653556358409682 0.9481693972291289 0.1978953305526665 0.0881014592282452 145.64629122061908 89383.51767172328 0.015371024078880486 0.016363787743258758 1.5769741113301754e-09 8.802175436283486 -0.1171862386118393 EKADS(ph)IERR ddPTM_A549_MK2206_60min_R1 2 EKADSIERR 9 2 O15020;O15020-2 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 1 EKADS(1)IERR;EKADS(1)IERR 47.288000000000004 0.011401999999999999 18487200.0 2620.8 3314.9 2151.55 3356.7 3008.5 2437.0 2363.75 2446.6000000000004 5284.7 4167.2 4398.6 True False 3063.126967591846 3483.614250917318 2456.6721426148833 4179.0916506879885 2565.9536353358512 2694.8817224503246 2793.212778124409 2793.4130423982606 4087.723887931778 3225.826625753907 3306.306224815792 0.926449868618115 1.0536272244750724 0.7430261976873466 1.2639759799988952 0.7760786390797214 0.8150732385958798 0.8448136948597464 0.8448742652546931 1.2363415878574653 0.9756587582669028 1.0 11.691004635597096 -8.75084097634173 24.973834394406186 1.1116057540777324 0.9100117361685542 0.16973602613110472 0.15255761528417205 206.16203772245112 485795.10035031266 0.025985152421292252 0.029312427748558974 1.7748392468310204e-09 8.75084097634173 -0.2015940179091782 EKADS(ph)IERR ddPTM_A549_PD325901_60min_R1 1 EKADSIERR 9 2 O15020;O15020-2 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 1 EKADS(1)IERR 44.61600000000001 0.018231 14879000.0 3753.5 3760.7 3542.2 4167.2 3815.9 4008.9 3689.6 3709.3 5400.8 4038.1 4550.5 True False 4134.5525568193425 4077.627387177796 3782.5949929789795 4424.598479602132 3547.8843481403455 3976.252847546559 3830.0097470265896 3635.3151016104443 5173.823157787914 3783.133676853541 3990.817347996177 1.0360164839153403 1.0217524460810534 0.9478246341888467 1.1086948095541782 0.8890119588965324 0.9963504968582612 0.959705597388382 0.9109199406070956 1.2964319603315682 0.9479596150280053 1.0 11.96246853565604 -8.740787566268404 24.999972556256893 1.1399817946619644 0.984472303997713 0.08261586753447325 0.1031513342260888 231.08108824351356 279734.1483513331 0.019498091809071565 0.022097047269675946 1.8164039335772513e-09 8.740787566268404 -0.15550949066425135 EKAGS(ph)PAPSNR ddPTM_A549_PD325901_60min_R1 2 EKAGSPAPSNR 11 1 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 EKAGS(0.991)PAPS(0.009)NR;EKAGS(1)PAPSNR 93.23700000000001 8.1155e-05 95063000.0 5523.299999999999 6169.299999999999 5098.6 5619.9 6293.799999999999 5096.5 4624.8 4923.8 5315.1 5750.2 6777.200000000001 True False 6084.021349961443 6689.208562160229 5444.6216563724865 5967.028459281055 5851.745200431277 5054.995793739191 4800.799294787668 4825.590946353623 5091.724830758139 5387.131390664731 5943.647364210465 1.0236174821871562 1.1254383297433062 0.9160404920986985 1.003933795805481 0.9845377496093436 0.8504871645275814 0.8077194020115611 0.8118905195168218 0.8566667096399162 0.9063679354706031 1.0 12.537132808177153 -5.773023087560267 24.730670161783937 0.9167065996737708 1.0745278940567855 0.4545136247554864 0.07089874100555185 139.45115417538483 297724.3422256756 0.011754772298763426 0.03700966558918636 1.6864633688048924e-06 5.773023087560267 0.15782129438301473 EKDAESVECPDADS(ph)LNIPDVDEEGYSIKPETNQNDTK ddPTM_A549_MK2206_60min_R1 1 EKDAESVECPDADSLNIPDVDEEGYSIKPETNQNDTK 37 2 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 EKDAESVECPDADS(1)LNIPDVDEEGYSIKPETNQNDTK 106.86 9.2345e-15 8443400.0 727.6 770.88 764.33 718.42 964.2 856.35 879.82 372.7 1135.6 871.07 867.45 True False 850.4010918879069 810.1144993053016 872.7234871440744 894.4329322510989 822.3674572680171 946.9683886008761 1039.6719054254554 425.53136634588066 878.3884131805636 674.2946820156113 652.0382245979306 1.3042196911266877 1.2424340609859894 1.3384544865942882 1.3717492295833382 1.2612258395972376 1.452320359262388 1.5944953320283535 0.6526172090727933 1.3471425141098259 1.0341336697421457 1.0 9.348812732178027 -13.96239800154127 0.24404902660043373 1.3903538485376674e-08 1.3320246847234243 0.20343383965434425 0.21840345255606786 32.86769580218739 0.6559808900696801 16.078657839045256 0.12108721918956358 1.0904405633266146e-14 13.96239800154127 1.3320246708198857 EKDAESVECPDADS(ph)LNIPDVDEEGYSIKPETNQNDTK ddPTM_A549_PD325901_60min_R1 2 EKDAESVECPDADSLNIPDVDEEGYSIKPETNQNDTK 37 2 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 EKDAESVECPDADS(1)LNIPDVDEEGYSIKPETNQNDTK;EKDAESVECPDADS(1)LNIPDVDEEGYSIKPETNQNDTK 158.15 4.3493999999999995e-52 57939200.0 2747.15 2629.9900000000002 2813.71 2714.15 2817.4700000000003 2377.71 2971.37 2845.92 2975.3 2750.76 2976.35 True False 3026.038645655058 2851.6284872507063 3004.6652808127387 2881.7968812181125 2619.5806269438376 2358.3467180872385 3084.4471113460513 2789.155893018951 2850.258487884459 2577.0765441523627 2610.277818637167 1.1592783818064856 1.0924616785578591 1.151090224710825 1.1040192199628416 1.0035639150132791 0.9034849475595428 1.1816547224679899 1.0685283662545837 1.0919368304530077 0.9872805590854161 1.0 11.349987649403552 -2.8812772260705715 0.010489779541539167 2.1581487473801173e-07 2.286357249870788 0.2197360731301724 0.07194776661897789 10714.356247493719 9.740974105235304 923.7621880001761 1218.2976948824387 0.0013143855439243376 2.8812772260705715 2.286357034055913 EKDDLS(ph)PQPLMTDFER ddPTM_A549_MK2206_60min_R1 2 EKDDLSPQPLMTDFER 16 1 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 EKDDLS(1)PQPLMTDFER;EKDDLS(1)PQPLMTDFER 112.53 8.2561e-08 15646400.0 3043.6000000000004 3317.6000000000004 2622.3 2711.0 3679.2 2943.1 3422.0 3144.3 4332.4 4444.7 4657.2 True False 3557.2852711242895 3486.451669384689 2994.181571229583 3375.195121701415 3137.9945538067695 3254.5368885283337 4043.7331049145346 3590.014154014899 3351.1183174211646 3440.639183021785 3500.6887078188743 1.0161672653666707 0.995933074996818 0.8553121460191547 0.9641517436734187 0.8963934858869289 0.9296847449643968 1.1551250175094854 1.0255165350739452 0.957274010093031 0.982846368298053 1.0 11.773423063179987 EKDDLS(ph)PQPLMTDFER ddPTM_A549_PD325901_60min_R1 4 EKDDLSPQPLMTDFER 16 1 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 EKDDLS(0.999)PQPLMT(0.001)DFER;EKDDLS(1)PQPLMTDFER;EKDDLS(0.999)PQPLMT(0.001)DFER;EKDDLS(0.973)PQPLMT(0.027)DFER 106.86 2.1410999999999998e-07 46203500.0 8975.1 9379.92 8423.779999999999 8703.689999999999 10862.44 8820.38 9367.98 10228.3 8978.279999999999 9438.31 10619.8 True False 9886.245544880589 10170.398777232107 8995.468367104191 9241.297163785819 10099.499687783655 8748.549749667663 9724.48360525535 10024.288532553875 8600.954114409735 8842.37349584794 9313.631924458807 1.0614812379387706 1.0919906283308576 0.9658389380281309 0.992233452936547 1.0843782285684984 0.9393274096105125 1.0441129394127755 1.0763028444605796 0.9234801400968523 0.9494012182966689 1.0 13.18512815251382 -8.76484967583219 24.999507875633633 0.9638656234773083 1.0294959536758745 0.30523701341585596 0.04960043626417907 91.80451908132221 672980.1451379072 0.00901327047448904 0.009788241544698728 1.7185031169043018e-09 8.76484967583219 0.06563033019856623 EKDEANEES(ph)EEEKS(ph)VEESH ddPTM_A549_MK2206_60min_R1 1 EKDEANEESEEEKSVEESH 19 2 Q3B820-2;Q3B820;Q3B820-3 Q3B820-2 FAM161A Protein FAM161A 2 EKDEANEES(0.899)EEEKS(0.899)VEES(0.201)H 40.515 0.030989 2604900.0 639.22 550.26 518.03 289.45 666.42 702.87 521.37 506.49 518.07 566.92 764.81 True False 747.1047085714512 578.2658836495108 591.494443558731 360.3652629939041 568.3905008012358 777.2472368726543 616.096180277408 578.2865085605713 400.72797218779033 438.85237825696 574.8865693178209 1.299568903580388 1.0058782280053957 1.0288889584959646 0.6268458548640738 0.9887002604282554 1.352001035256331 1.0716830295904944 1.0059141044933175 0.6970557212065455 0.763372118394967 1.0 9.167133516221197 -8.548409969289132 23.715503546310234 0.8566556439407242 1.0428789609160116 0.2178747444997734 0.18939642579610416 181.71776065387712 168793.21513793463 0.0351411498732196 0.03984722546070605 2.8287204535605914e-09 8.548409969289132 0.18622331697528738 EKDECT(ph)PTR ddPTM_A549_MK2206_60min_R1 3 EKDECTPTR 9 1 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 EKDECT(0.999)PT(0.001)R;EKDECT(0.824)PT(0.176)R;EKDECT(0.825)PT(0.175)R 99.215 0.002376 227634000.0 20923.9 22567.699999999997 20897.9 17479.0 16704.1 14106.2 12403.14 13609.2 16027.0 24112.1 25891.3 True False 24455.34277976001 23716.299535559672 23861.53645936723 21761.355784662122 14246.949017787474 15598.908721062262 14656.629989155363 15538.345776427042 12396.910089859899 18665.159863419274 19461.77564647232 1.2565833264136324 1.2186092351680426 1.2260719110536258 1.1181588042099657 0.7320477471627778 0.8015151856860374 0.7530982915123704 0.7984032936503177 0.6369876169087885 0.9590676720601574 1.0 14.248355723763744 -6.634894495425404 4.245601150627287 0.8093422738032874 1.2244401578777433 0.799388912963654 0.09570803052796403 0.09726222843140386 3.1345470215122324 0.01897106669437318 0.040708604712387624 2.3179576905950206e-07 6.634894495425404 0.4150978840744559 EKDECT(ph)PTR ddPTM_A549_PD325901_60min_R1 4 EKDECTPTR 9 1 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 EKDECT(0.834)PT(0.166)R;EKDECT(0.995)PT(0.005)R;EKDECT(0.989)PT(0.011)R;EKDECT(0.977)PT(0.023)R 107.03 0.0019314 429319000.0 18195.5 18271.9 21256.0 15964.7 14584.2 14886.2 15864.599999999999 18054.699999999997 11486.2 16581.600000000002 17516.600000000002 True False 20042.693765180877 19811.73713823864 22698.55998271164 16950.80326053565 13559.85610475862 14764.971722703885 16468.33603444223 17694.584844861856 11003.474958336461 15534.63494616644 15362.169246876132 1.304678619476642 1.2896445039666073 1.477562160521526 1.103412089017478 0.8826784737784341 0.9611254429908273 1.072005897721185 1.1518285315376289 0.7162709108008296 1.011226650124648 1.0 13.907094328729752 -6.510681883691587 3.7099322780068773 0.9099769915844761 1.3486915276802052 0.6298212092399098 0.12360679422733079 0.11090724625746362 3.3047765988141764 0.02137396098492997 0.04970370747252875 3.0854471815199466e-07 6.510681883691587 0.4387145360957291 EKDECT(ph)PTRK ddPTM_A549_MK2206_60min_R1 1 EKDECTPTRK 10 2 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 EKDECT(0.973)PT(0.027)RK 40.066 0.0357 65363000.0 5509.1 6266.1 4951.3 3376.4 3161.1 2674.0 2206.1 2564.2 3498.4 6772.8 7867.2 True False 6438.901395436599 6585.017725322941 5653.468792140119 4203.6181515723565 2696.106377483848 2956.960905142457 2606.9198137790645 2927.6832025331537 2706.0179857968337 5242.819776086118 5913.557116325831 1.0888372715062522 1.1135459750855163 0.9560182950685174 0.7108442632552298 0.45591956320850985 0.500030835413602 0.44083785148232024 0.4950798893022548 0.4575956454916457 0.8865763318007063 1.0 12.529810484493998 -6.15128309463328 2.7412872341139662 0.6583458771990276 1.094939436350152 0.5409982106953172 0.1786934166113676 0.23811077611417208 3.437565007125005 0.034665932911915866 0.10849163269738309 7.058572915580372e-07 6.15128309463328 0.4365935591511243 EKDECT(ph)PTRK ddPTM_A549_PD325901_60min_R1 7 EKDECTPTRK 10 2 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 EKDECT(0.828)PT(0.172)RK;EKDECT(0.806)PT(0.194)RK;EKDECT(0.963)PT(0.037)RK;EKDECT(0.99)PT(0.01)RK;EKDECT(0.993)PT(0.007)RK;EKDECT(0.793)PT(0.207)RK;EKDECT(0.993)PT(0.007)RK 74.475 0.00055701 490174000.0 42104.200000000004 43377.100000000006 49953.4 36266.8 39277.5 34880.0 31113.6 37039.0 29707.8 41102.8 42258.600000000006 True False 46378.58738852618 47032.640448945705 53343.538118196615 38506.917868121156 36518.78390001898 34595.94884442714 32297.645074015192 36300.22808846661 28459.284477657355 38507.562193352285 37061.06009933665 1.251410166471636 1.269058152219114 1.4393419393621554 1.0390128551344482 0.9853680332439443 0.9334851391648769 0.8714711610365748 0.9794708513779491 0.767902601851552 1.0390302406390561 1.0 15.177616528539616 -6.508456813035597 2.6730548404086023 0.9014367043343264 1.3143062955122036 0.7655629344224971 0.08963705989926271 0.09660296725398673 1.3766998265829744 0.014276717858525915 0.03526494451563722 3.101295771200071e-07 6.508456813035597 0.41286959117787714 EKDENLHEPPSSDDMKS(ph)DDESSQK ddPTM_A549_MK2206_60min_R1 2 EKDENLHEPPSSDDMKSDDESSQK 24 2 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2;H0YNP8 Q99081 TCF12 Transcription factor 12 1 EKDENLHEPPS(0.166)S(0.166)DDMKS(0.365)DDES(0.271)S(0.033)QK;EKDENLHEPPS(0.028)S(0.028)DDMKS(0.865)DDES(0.04)S(0.04)QK 71.085 2.254e-05 13983900.0 2622.7 2988.2 2568.7 2281.16 4621.1 3346.2 3256.99 3423.6000000000004 4445.4 4344.7 4303.8 True False 3065.347641141305 3140.2866163658437 2932.980285252422 2840.044302405163 3941.3423115341548 3700.2926629722097 3848.7429238385694 3908.9057843352753 3438.5239978450827 3363.2292524748004 3235.0476811626904 0.9475432646605089 0.9707079851253416 0.9066266016203804 0.877898745957413 1.218325879548588 1.1438139488696217 1.1897020703123962 1.2082992801300527 1.0628974706824914 1.0396227765230468 1.0 11.659571260827324 -6.736036681333745 24.999987100311376 1.0760460565850043 0.9275474293050898 0.5529531904018132 0.07844662503877158 200.22854988651912 197053.28728382132 0.01371025097589581 0.028531812205002414 1.8363832323952096e-07 6.736036681333745 -0.14849862727991447 EKDFS(ph)PEALK ddPTM_A549_MK2206_60min_R1 2 EKDFSPEALK 10 1 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RJT0 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EKDFS(1)PEALK;EKDFS(1)PEALK 50.563 0.0075072 14567600.0 2111.7200000000003 2307.7 2010.3400000000001 1738.71 2958.7 2202.98 2156.62 2166.9 3395.2 2881.5 3185.1 True False 2468.1267094028726 2425.15207301635 2295.4364412560262 2164.694028053658 2523.4791493661905 2436.0978813802285 2548.449938258558 2474.0647108529333 2626.1926210202964 2230.567148711336 2394.1517657119934 1.0308981847977712 1.0129483467791516 0.9587681424921656 0.9041590675476258 1.0540180390843923 1.0175202408923985 1.0644479496898887 1.0333783957581213 1.0969198605666908 0.9316732467241862 1.0 11.225298892540925 -6.832305217870559 24.99999955218217 1.0455385467264402 0.9779981070280772 0.13948469427169485 0.05124227104690479 40.282221700256926 14210.026301905667 0.006639563188134703 0.012547598157905947 1.4712781392668091e-07 6.832305217870559 -0.06754043969836299 EKDFS(ph)PEALK ddPTM_A549_PD325901_60min_R1 2 EKDFSPEALK 10 1 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RJT0 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EKDFS(1)PEALK;EKDFS(1)PEALK 75.462 0.00043008 25840000.0 3878.5 3565.1 3680.8 3883.1 4123.8 4083.7 4033.5 3718.8 4451.200000000001 4358.4 4526.5 True False 4272.242464799206 3865.5434887195397 3930.6012224484853 4122.950267840045 3834.1585143376838 4050.443701146422 4186.997049715889 3644.6256166578387 4264.131543464964 4083.209880190802 3969.7691958476425 1.0761941699955626 0.9737451468873499 0.9901334381252878 1.0385868962237474 0.9658391521472314 1.0203222155542857 1.0547205248344074 0.9180950923973358 1.0741509979787296 1.0285761410164143 1.0 11.954839415535197 EKDFS(ph)PEALKK ddPTM_A549_MK2206_60min_R1 2 EKDFSPEALKK 11 2 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RJT0 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EKDFS(1)PEALKK;EKDFS(1)PEALKK 72.417 0.00040978 77528000.0 11117.4 12432.8 12396.1 11209.6 17730.6 12263.4 11988.8 13063.400000000001 19306.6 17397.9 17475.9 True False 12993.745325666041 13065.576415217602 14154.05337875873 13955.95250321807 15122.452227583788 13561.1048482139 14167.009774459193 14915.176954984634 14933.685926304917 13467.702306633679 13136.151719696789 0.9891591999643838 0.9946273988010229 1.0774885735778816 1.0624079868301188 1.151208706345 1.0323498949757044 1.0784748895079144 1.1354297113225569 1.136838721488946 1.0252395521924242 1.0 13.681255074688137 -5.754497952073306 8.110805322501786 1.075608843978001 0.9914912416950243 0.3395553972385843 0.04609041631181988 0.13263439447258957 63.805220869365186 0.007824563132145341 0.02793714211471841 1.7599569629037994e-06 5.754497952073306 -0.0841176022829766 EKDFS(ph)PEALKK ddPTM_A549_PD325901_60min_R1 4 EKDFSPEALKK 11 2 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RJT0 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EKDFS(1)PEALKK;EKDFS(1)PEALKK;EKDFS(1)PEALKK;EKDFS(1)PEALKK 65.092 0.0012038 118218000.0 14817.6 14603.2 15705.8 15494.3 17981.9 18226.9 17039.4 16497.1 18263.5 16258.9 16266.5 True False 16321.871843859404 15833.862913934852 16771.690034647734 16451.347720891546 16718.913378187295 18078.466169509444 17687.843691317463 16168.052398775408 17495.94860803206 15232.310279238765 14265.823621839316 1.144124046148483 1.1099157913108537 1.1756552218248535 1.1531999944052616 1.1719557048632359 1.2672570928069948 1.239875394522573 1.1333416721922736 1.22642400970441 1.0677483952570304 1.0 13.800275421305518 -10.830458688263736 0.9823122748575958 0.9957362832552494 1.1827653135731533 0.5584904875991654 0.049016553581481666 0.2815789273071234 0.4639302737172834 0.03813713950011656 0.008565140564093363 1.4775470247750816e-11 10.830458688263736 0.18702903031790385 EKDKHIEEVRK ddPTM_A549_MK2206_60min_R1 1 EKDKHIEEVRK 11 3 P16949 P16949 STMN1 Stathmin 0 38.021 0.023735 1422600.0 472.58 732.15 957.92 391.49 607.12 546.98 759.92 388.24 792.96 1081.6 1028.0 False True 552.3399505282943 769.4133077345065 1093.7674601350875 487.405067574654 517.813452247001 604.8610605440617 897.987627436193 443.2742089351343 613.3558260969178 837.265808796176 772.7192286433492 0.7148003182191139 0.9957217048750723 1.4154785070579874 0.6307660654832976 0.670118502364847 0.782769521092424 1.1621137330991174 0.5736549480118203 0.7937628615425771 1.0835317379977074 1.0 9.593800488754624 EKDKIDGTAEETEEREQAT(ph)PR ddPTM_A549_MK2206_60min_R1 1 EKDKIDGTAEETEEREQATPR 21 3 O75376-2;O75376;A0A088AWL3;O75376-3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 EKDKIDGTAEET(0.008)EEREQAT(0.992)PR 75.71 6.3401e-05 14726000.0 1619.0 1268.8 1297.6 1145.0 1843.6 1454.1 1349.4 1136.3 2104.5 1843.6 2128.1 True False 1892.2476192503054 1333.3765005170274 1481.6191918649693 1425.525051401004 1572.4088822021524 1607.9718968465386 1594.5685130834813 1297.374004772804 1627.8341101959277 1427.129479564192 1599.634037427929 1.1829253285288137 0.8335509681082929 0.9262238469539463 0.891156988440383 0.9829803851451222 1.0052123543407567 0.9968333229814286 0.8110442603852488 1.0176290777191401 0.8921599854544799 1.0 10.643526169288629 EKDKIDGTAEETEEREQAT(ph)PR ddPTM_A549_PD325901_60min_R1 2 EKDKIDGTAEETEEREQATPR 21 3 O75376-2;O75376;A0A088AWL3;O75376-3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 EKDKIDGTAEET(0.075)EEREQAT(0.924)PR;EKDKIDGTAEET(0.001)EEREQAT(0.999)PR 81.97399999999999 2.8045e-05 24176000.0 3397.9 4066.3 3568.5 5035.9 4989.0 3735.9 3621.0 3754.3 4258.5 3854.2 5224.4 True False 3742.8523065982304 4408.981371681093 3810.6798691337276 5346.956105641284 4638.589851115645 3705.4760690336975 3758.799136487231 3679.4175413086273 4079.5300543326593 3610.8451542381117 4581.831920200251 0.8168899190947727 0.9622747949882012 0.8316935093872191 1.16699088896469 1.0123876065084711 0.8087324313877816 0.8203703675631451 0.8030450713582301 0.890370953230943 0.7880789206427934 1.0 12.161708820489043 -10.66813484097858 1.0949591429879182 0.9965255959755015 0.9046361113156491 0.0 0.12283198353580033 0.9634298626288633 2.163158505852159 0.061844507864450816 0.019083350952637485 2.1471637131668464e-11 10.66813484097858 -0.09188948465985236 EKDLDLEPLS(ph)DLEEGLEETR ddPTM_A549_PD325901_60min_R1 1 EKDLDLEPLSDLEEGLEETR 20 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 EKDLDLEPLS(1)DLEEGLEETR 209.68 6.579399999999999e-67 34831000.0 7523.1 9405.4 8059.7 8407.7 8333.7 7257.1 8294.0 9095.8 7458.8 8530.7 7750.0 True False 8286.8395737865 10198.02606625417 8606.679708913296 8927.024533727883 7748.369661704241 7198.000583683835 8609.632708650948 8914.377133482936 7145.332574675694 7992.070146141634 6796.799131297743 1.2192267880372472 1.500415985415037 1.2662842527273548 1.3134159714417524 1.1400027442365817 1.059027999008923 1.2667187219062443 1.311555183738507 1.0512790560152105 1.175857928379836 1.0 12.730639771525237 -7.450702105176725 0.2396328328246667 0.953844537981217 1.457545471306092 0.24365357548626831 0.1201542221063277 1.8340130551822278 0.2300959658090431 0.11344944259556185 0.2971839017423794 3.5424024113157025e-08 7.450702105176725 0.503700933324875 EKDLEDLFYK ddPTM_A549_PD325901_60min_R1 2 EKDLEDLFYK 10 1 Q13242;S4R3G0;H0YIB4 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 0 ; 70.977 0.0028816999999999996 2863500.0 2324.2 2747.2 2445.7 1912.63 2789.7 2968.5 2570.3999999999996 3211.3 2422.8 2695.0 2735.0 False True 2560.151073014391 2978.716185299237 2611.6799091888324 2030.7688112021078 2593.7610959425356 2944.325520203037 2668.2179785768494 3147.2481022838842 2320.9781415139537 2524.837240068422 2398.6123385934625 1.0673467453751422 1.2418497717917791 1.088829514952096 0.8466431938697285 1.0813590233857913 1.2275120380351159 1.1124006725244657 1.3121120289614698 0.9676337039419078 1.0526241358155346 1.0 11.227984294156194 EKDLLPS(ph)PAGPVPSK ddPTM_A549_MK2206_60min_R1 2 EKDLLPSPAGPVPSK 15 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EKDLLPS(1)PAGPVPSK;EKDLLPS(1)PAGPVPSK 69.122 0.00065844 19254700.0 3131.5 3885.2 3824.3999999999996 3414.1000000000004 4362.8 3500.7 3619.2 4442.799999999999 5530.6 4991.3 5505.6 True False 3660.0206421756207 4082.940084969068 4366.757427071814 4250.554653264773 3721.037899366213 3871.141750423406 4276.761792316389 5072.580505504366 4277.9279305533855 3863.7618633916013 4138.407573170059 0.884403137550807 0.9865969005661512 1.0551781935114808 1.0270990901963792 0.8991472767182918 0.9354181969704051 1.0334317528421566 1.2257324625033783 1.0337135371314945 0.9336349296383883 1.0 12.014860021410364 -7.807699899990018 11.95060114093541 1.0366092031642453 0.9696240775274698 0.19290030545770998 0.08092668006796636 1.2464735469908796 319.5276855906112 0.012527060630621381 0.017320389627083436 1.5570411844595658e-08 7.807699899990018 -0.0669851256367755 EKDLLPS(ph)PAGPVPSK ddPTM_A549_PD325901_60min_R1 2 EKDLLPSPAGPVPSK 15 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EKDLLPS(1)PAGPVPSK;EKDLLPS(0.999)PAGPVPS(0.001)K 88.755 1.0103e-05 33566000.0 7525.5 8002.200000000001 7998.7 8468.2 10270.9 8567.5 8027.9 9499.099999999999 10983.2 8449.4 8969.9 True False 8289.483220019705 8676.573477723341 8541.53988209049 8991.261481322415 9549.50741668144 8497.729120545568 8333.406127535434 9309.632998600211 10521.614299106846 7915.9034420163725 7866.659164880988 1.0537488718243093 1.1029553074395344 1.0857900034899646 1.1429580579087464 1.2139215919399644 1.0802208335759425 1.059332297595673 1.1834290520887278 1.337494618564172 1.0062598717070679 1.0 12.941535362636492 -6.286750512594538 4.285806469107943 1.1547612008711814 1.082142449490517 0.0 0.09518122400284716 0.5150351507789527 22.818233171131848 0.0176254514774843 0.044678373137985145 5.167131181360005e-07 6.286750512594538 -0.07261875138066443 EKDLLPS(ph)PAGPVPSKDPK ddPTM_A549_MK2206_60min_R1 2 EKDLLPSPAGPVPSKDPK 18 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EKDLLPS(1)PAGPVPSKDPK;EKDLLPS(0.996)PAGPVPS(0.004)KDPK 94.389 7.1436e-07 61149000.0 5285.7 5823.5 6377.7 5954.5 8588.1 6353.7 5688.5 5487.200000000001 9372.9 8037.2 8851.2 True False 6177.79693704221 6119.891275820388 7282.15376075617 7413.35276730766 7324.801866587278 7026.0443167552785 6722.026816863335 6265.027403845224 7249.953115445674 6221.590937922176 6653.202759307398 0.9285448167651096 0.9198413902626157 1.0945335688994162 1.1142532454669085 1.1009437306476728 1.0560394100309507 1.0103445002423317 0.9416558656777533 1.0896936975659521 0.9351272106082404 1.0 12.699833285823876 -5.748443560801244 24.956254922300115 1.046517237133562 0.9241930122463742 0.3469751860192323 0.05933319294729822 161.73837420334064 310584.97483343404 0.0075751812104819785 0.02897646788535818 1.784663901355772e-06 5.748443560801244 -0.12232422488718786 EKDLLPS(ph)PAGPVPSKDPK ddPTM_A549_PD325901_60min_R1 4 EKDLLPSPAGPVPSKDPK 18 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EKDLLPS(1)PAGPVPSKDPK;EKDLLPS(1)PAGPVPSKDPK;EKDLLPS(0.996)PAGPVPS(0.004)KDPK;EKDLLPS(1)PAGPVPSKDPK 100.19 6.292300000000001e-09 85126500.0 10941.599999999999 11221.8 12744.5 12878.3 14818.1 15418.2 14988.7 15482.8 16039.3 15396.7 14795.4 True False 12052.383177219803 12167.500468910526 13609.41840890423 13673.763342258619 13777.327775669819 15292.639291087915 15559.103180631348 15173.983407978376 15365.223999168218 14424.549734382736 12975.659595768087 0.9288455117264787 0.9377172990018067 1.0488421269422665 1.0538010219317262 1.0617824607670188 1.1785635387718936 1.199099210779684 1.1694190415512484 1.184157451554869 1.1116621569732912 1.0 13.663520256965501 -5.9133997249427495 1.170279872943458 1.1088633892029627 0.9058463471869115 0.6016699066054318 0.058721721813344355 0.536100256130646 1.1150451468110891 0.012420620644097708 0.09941846943563665 1.220675632266529e-06 5.9133997249427495 -0.2030170420160512 EKDRES(ph)EKDR ddPTM_A549_PD325901_60min_R1 1 EKDRESEKDR 10 3 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 EKDRES(1)EKDR 61.167 0.0022541 100820000.0 5956.8 5995.3 4548.4 3497.4 4669.7 3025.5 2538.6 3011.1 3594.1 5158.3 7872.0 True False 6561.529950835614 6500.544971507181 4857.081775751111 3713.4264548283018 4341.716381590442 3000.8613311013296 2635.207812175223 2951.0412483377468 3443.052475819425 4832.604057679014 6903.793904719464 0.9504237874699769 0.9415902417167146 0.7035380607799994 0.537881997359421 0.6288884693707942 0.434668440645357 0.3817042989035034 0.4274521066337745 0.49871889620947973 0.6999925148946616 1.0 12.753173681815515 -5.789875162573882 4.5250408830878515 0.6610263952576084 0.9513075215663268 0.32292337750819866 0.17659448093188113 0.2583757535874292 12.166108175359826 0.034719089942917426 0.1251322180694563 1.622276351728368e-06 5.789875162573882 0.2902811263087184 EKDS(ph)PFKPK ddPTM_A549_MK2206_60min_R1 2 EKDSPFKPK 9 2 Q15291 Q15291 RBBP5 Retinoblastoma-binding protein 5 1 EKDS(1)PFKPK;EKDS(1)PFKPK 71.241 0.00065581 149368000.0 13488.8 14078.400000000001 13312.9 12641.9 15938.099999999999 13120.4 11730.9 14537.4 16867.3 19312.9 20171.3 True False 15765.379670502465 14794.930426291714 15200.869404577017 15739.16606751645 13593.626603073395 14508.792019383343 13862.252682770866 16598.12096892031 13046.883481543262 14950.102476608427 15162.209510441233 1.0397811519255071 0.975776677937566 1.0025497533264636 1.038052274418046 0.89654654842438 0.9569048633309069 0.9142633646649474 1.09470331203973 0.8604869542634085 0.9860108097248793 1.0 13.888192384871463 -6.75136695660404 24.997071392419244 0.9431132870118877 1.01048614439521 0.13120431957637468 0.061021428618244736 280.3080771337925 695644.9977722132 0.009624533594519629 0.019853577336101554 1.772691014758981e-07 6.75136695660404 0.06737285738332233 EKDS(ph)PFKPK ddPTM_A549_PD325901_60min_R1 2 EKDSPFKPK 9 2 Q15291 Q15291 RBBP5 Retinoblastoma-binding protein 5 1 EKDS(1)PFKPK;EKDS(1)PFKPK 80.52199999999999 0.00034227 232297000.0 19978.8 17838.9 18128.3 17860.9 22812.0 19065.4 19332.699999999997 19360.7 20987.0 21264.0 21114.0 True False 22007.0330683848 19342.246708625007 19358.595452323632 18964.127227953 21209.7638171277 18910.137703513225 20068.41647775937 18974.535650324684 20104.98937425843 19921.38741106305 18517.111852673628 1.188470061825936 1.044560667047666 1.0454435662723778 1.0241406639888513 1.1454142517406292 1.0212250081960188 1.083776813437661 1.0247027614938238 1.0857518998760887 1.075836640700891 1.0 14.176571475947096 -14.999999999865699 0.25479626043131576 0.5313717746907655 1.079402158151546 0.0 0.05478539002709346 47.354369143417124 0.6121412764436175 11.245518096207892 0.023072437741279886 1.0000000003092405e-15 14.999999999865699 0.5480303834607806 EKDS(ph)PHMQDPNQADEEAMTQIIR ddPTM_A549_MK2206_60min_R1 5 EKDSPHMQDPNQADEEAMTQIIR 23 1 P23511-2;P23511 P23511-2 NFYA Nuclear transcription factor Y subunit alpha 1 EKDS(1)PHMQDPNQADEEAMTQIIR;EKDS(1)PHMQDPNQADEEAMTQIIR;EKDS(1)PHMQDPNQADEEAMTQIIR;EKDS(1)PHMQDPNQADEEAMTQIIR;EKDS(1)PHMQDPNQADEEAMTQIIR 155.22 3.72e-33 39929200.0 4433.65 6049.81 4263.68 4444.22 6118.23 4806.49 4268.68 4688.22 6838.32 7035.85 6876.39 True False 5181.941727664679 6357.719488172224 4868.333936475672 5533.0540995086185 5218.2464717702715 5315.109581510157 5044.243901311098 5352.789542071599 5289.451438553109 5446.4465983899545 5168.792584290695 1.0025439487384245 1.230020238671404 0.9418706316968115 1.0704732312774572 1.0095677833213659 1.0283077710767805 0.9759037181414218 1.0355976671109066 1.0233437214387606 1.0537173836193625 1.0 12.33561159497104 -5.776896216437562 24.99991198038232 1.0120866644756246 1.1162821849765636 0.3014203685092648 0.05904499858794614 148.02571827824178 239418.1944332602 0.006664452319604948 0.020824216152955977 1.671490003362426e-06 5.776896216437562 0.10419552050093905 EKDVADGNVS(ph)DFDNEEEEQSVPPK ddPTM_A549_MK2206_60min_R1 2 EKDVADGNVSDFDNEEEEQSVPPK 24 1 O43156 O43156 TTI1 TELO2-interacting protein 1 homolog 1 EKDVADGNVS(1)DFDNEEEEQSVPPK;EKDVADGNVS(1)DFDNEEEEQSVPPK 76.859 7.641e-06 8290000.0 2543.0 2674.3999999999996 2455.2 2983.0 3340.0 2783.8 2555.3 2301.8999999999996 3850.9 3451.4 4147.2 True False 2972.1962296192255 2810.5155367140123 2803.3842785657125 3713.8351339119604 2848.6904244712478 3078.3798682631136 3019.564933661049 2628.2013742730937 2978.6772986236624 2671.726342898598 3117.3357831028175 0.9534411550175937 0.9015761317558759 0.8992885186642885 1.1913490853447368 0.9138221297533192 0.9875034588667476 0.9686364074182432 0.8430921649566838 0.9555201960498646 0.8570543979831761 1.0 11.606097847558008 -8.69489386887928 0.004041028069070218 1.9363294163039348 1.1137311265070615e-07 0.0 0.0928545919599292 26852.254197556464 87.7156334081009 21028.935409446865 20997.34108023353 2.0188596641247543e-09 8.69489386887928 -1.9363293049308221 EKDVADGNVS(ph)DFDNEEEEQSVPPK ddPTM_A549_PD325901_60min_R1 2 EKDVADGNVSDFDNEEEEQSVPPK 24 1 O43156 O43156 TTI1 TELO2-interacting protein 1 homolog 1 EKDVADGNVS(1)DFDNEEEEQSVPPK;EKDVADGNVS(1)DFDNEEEEQSVPPK 147.55 1.9422e-28 16004900.0 3996.3 4442.0 3672.8999999999996 4147.1 4644.5 4257.3 4514.0 4473.5 4136.7 5078.1 4855.2 True False 4402.001434079431 4816.3429292003575 3922.1650809419275 4403.2569482525405 4318.286342655168 4222.629960303315 4685.782740155579 4384.272533107141 3962.8488847617505 4757.467899366033 4258.041179648619 1.0338090329231369 1.131117038562274 0.9211195748148193 1.0341038901403732 1.0141485627932607 0.9916836832122357 1.1004550079391806 1.029645404572846 0.9306741568640189 1.117290251232053 1.0 12.055974186868351 -8.717879247904483 13.93070425016278 0.9672647616702239 1.0320381362241229 0.0 0.06985710438725173 1.8471463428202413 589.5221393289703 0.00916009525349076 0.01038378559194802 1.9147882425191738e-09 8.717879247904483 0.06477337455389898 EKEAVIT(ph)PVASATQSVSR ddPTM_A549_MK2206_60min_R1 2 EKEAVITPVASATQSVSR 18 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EKEAVIT(1)PVASATQSVSR;EKEAVIT(1)PVASATQSVSR 165.34 1.0743e-23 173317000.0 9654.7 12666.3 11769.0 10153.6 16099.7 12802.0 11099.1 11618.2 17635.9 17498.1 17804.7 True False 11284.177325247623 13310.960567858461 13438.021169126712 12641.232455812426 13731.45545714363 14156.699142720166 13115.662800922533 13265.115429245254 13641.396808745245 13545.267057041752 13383.301605278435 0.8431534802142614 0.9945946792836647 1.0040886446007236 0.9445526095613556 1.0260140481126032 1.0577882468954223 0.980002034456853 0.9911691315402644 1.0192848678957527 1.0121020549741955 1.0 13.708146446349584 -5.258526161142659 4.21161471602222 1.0058310246255888 0.8298399280026983 0.7440083996720829 0.026972558152423897 0.08016363418760823 3.1829847445076096 0.003611349207652694 0.04246259456250587 5.514089854650541e-06 5.258526161142659 -0.17599109662289047 EKEAVIT(ph)PVASATQSVSR ddPTM_A549_PD325901_60min_R1 4 EKEAVITPVASATQSVSR 18 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EKEAVIT(1)PVASATQSVSR;EKEAVIT(0.999)PVAS(0.001)ATQSVSR;EKEAVIT(1)PVASATQSVSR;EKEAVIT(0.979)PVAS(0.02)AT(0.001)QSVSR 161.56 2.9994e-23 294704000.0 24947.199999999997 24497.4 26738.4 27449.2 30785.7 29400.5 28805.2 29539.8 30768.1 31581.8 31084.7 True False 27479.821378842018 26561.881871632784 28553.028615061 29144.67474234372 28623.418636899372 29161.072075704724 29901.397648810263 28950.605515475185 29475.02375594994 29587.719758216306 27261.478962148525 1.0080091919076237 0.9743375224987939 1.0473763604207145 1.0690790027499952 1.0499583928165397 1.069680486381304 1.0968369577573969 1.0619601950309425 1.081196797755354 1.0853306894793813 1.0 14.734576211446015 -5.7741097206634615 23.46886682504555 1.0498955376237056 0.9911733751127685 0.4505753066923792 0.02764503549109645 88.02164606441809 163042.59019613458 0.004893416607700536 0.015387346609255996 1.6822490020328774e-06 5.7741097206634615 -0.05872216251093709 EKEDAHADPEIQPMKEDDGTFGEYS(ph)DAEDHKPLK ddPTM_A549_MK2206_60min_R1 1 EKEDAHADPEIQPMKEDDGTFGEYSDAEDHKPLK 34 3 H7C132;C9JYY6;F8W775;Q92823-3;Q92823-4;Q92823-6;Q92823 H7C132 NRCAM Neuronal cell adhesion molecule 1 EKEDAHADPEIQPMKEDDGTFGEYS(1)DAEDHKPLK 158.52 1.8692e-51 19631000.0 2088.6 2421.3 1991.5 1952.7 3307.2 2482.4 2264.5 2205.8 3402.3 2791.8 3875.8 True False 2441.1046186326025 2544.533827791518 2273.924645961069 2431.111587660034 2820.7152610213498 2745.0859203162436 2675.9303378372188 2518.478904979187 2631.6844823566685 2161.1304410106914 2913.331893361761 0.8379081779850889 0.8734102124064284 0.7805237196429188 0.8344780741251961 0.9682093782203651 0.9422496374584447 0.9185120116024271 0.8644668706362377 0.9033246395143489 0.7418071541848645 1.0 11.50845435058659 -14.99999999827246 0.04596720709420856 1.5303924426650524 0.5979874078667232 0.0 0.08717720701285521 261.30657474247454 0.9194524191525325 17.94927868258526 4.721802821446557 1.0000000039778097e-15 14.99999999827246 -0.9324050347983291 EKEDDEEEEDEDAS(ph)GGDQDQEER ddPTM_A549_MK2206_60min_R1 2 EKEDDEEEEDEDASGGDQDQEER 23 1 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEDDEEEEDEDAS(1)GGDQDQEER;EKEDDEEEEDEDAS(1)GGDQDQEER 116.94 9.0407e-16 4390600.0 587.21 852.6999999999999 571.03 574.37 938.6199999999999 554.46 413.89 558.8299999999999 1125.83 1034.56 999.31 True False 686.3166920938671 896.0987878238248 652.0106405137585 715.0906757844489 800.5502413823951 613.1325891792393 489.0884555210626 638.0458638450991 870.8313025810792 800.8521774668745 751.1537474470671 0.9136833763080321 1.1929632127502257 0.8680122314902049 0.9519897600388934 1.0657608300607047 0.8162544502548009 0.6511163089890969 0.8494211285154528 1.1593249791281186 1.066162793154819 1.0 9.552964421053003 -8.757561495610945 24.99433644403157 1.0752367961920448 0.9157900219829782 0.22134346229683544 0.13487095494694687 119.43661449750806 769811.0830962808 0.025148723580789383 0.027991516533151586 1.747585788712408e-09 8.757561495610945 -0.1594467742090666 EKEDDEEEEDEDAS(ph)GGDQDQEER ddPTM_A549_PD325901_60min_R1 2 EKEDDEEEEDEDASGGDQDQEER 23 1 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEDDEEEEDEDAS(1)GGDQDQEER;EKEDDEEEEDEDAS(1)GGDQDQEER 166.23 2.4467e-34 3148600.0 466.25 422.01 634.3 452.02 599.76 495.14 359.77 628.52 423.49 429.51 340.25 True False 513.5833567648914 457.57426374422386 677.347412355758 479.9402487880963 557.6349266596752 491.1077440031441 373.46124422369803 615.9836755355985 405.6921880261451 402.39066529936497 298.4014070224589 1.7211157343042858 1.533418586427057 2.2699203033743673 1.6083712659973284 1.8687409426916857 1.6457956713527873 1.2515398233212414 2.0642787233548034 1.3595518602752803 1.3484878282396282 1.0 8.221110527980269 -9.339594495442196 0.4756350082560216 0.9811916471152948 1.8035780529584704 0.3535095898300139 0.28270557571226507 0.46653155209861025 0.24810545866069478 0.14735313492624524 0.0863460746211301 4.5751517616653203e-10 9.339594495442196 0.8223864058431756 EKEDDEEEEDEDAS(ph)GGDQDQEERR ddPTM_A549_PD325901_60min_R1 1 EKEDDEEEEDEDASGGDQDQEERR 24 2 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEDDEEEEDEDAS(1)GGDQDQEERR 55.586999999999996 0.00084548 3827300.0 458.52 443.23 503.64 423.46 501.44 431.12 403.36 487.07 354.12 780.76 557.63 True False 505.0686128554166 480.5825476158202 537.8200390333501 449.61616245256255 466.2205842740886 427.6091016573803 418.71008552706104 477.3550067509767 339.23756788547206 731.4626803546647 489.04504510781453 1.0327650139959388 0.982695873158006 1.099735176572094 0.9193757649736345 0.9533285102015622 0.8743756959302387 0.8561789751591339 0.9760961930321559 0.6936734586702212 1.4956959234571265 1.0 8.933823545260367 -6.7985109893092845 1.210860482521448 0.8621369174599521 1.0323394197237477 0.0 0.20784602143170297 0.4808163007541513 1.3884762709628407 0.01810276025763785 0.05108722195001953 1.59033644172668e-07 6.7985109893092845 0.17020250226379552 EKEDTDVADGCRET(ph)PTK ddPTM_A549_MK2206_60min_R1 2 EKEDTDVADGCRETPTK 17 2 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 EKEDTDVADGCRET(1)PTK;EKEDTDVADGCRET(0.994)PT(0.006)K 135.86 7.5019e-13 102942000.0 7301.299999999999 9716.7 8457.0 7106.0 9956.3 8948.3 8474.400000000001 8998.0 10798.1 9812.7 10981.8 True False 8533.580940353451 10211.238526618701 9656.329766955943 8846.970319000464 8491.741459030856 9895.203166599196 10014.088785589642 10273.494055219297 8352.3475910224 7596.004254783878 8254.71597773884 1.0337825024345657 1.2370187604462919 1.1697955196758978 1.0717473917768707 1.0287139475096685 1.1987333293216131 1.21313547462995 1.244560573970644 1.0118273740183008 0.9202017701479538 1.0 13.011002861453326 -8.839902512717439 9.8339649743898 1.0053637104541329 1.1503283773814785 0.49034483727962375 0.07682276580673884 0.23195135681283743 27.275253944020662 0.012729569602255663 0.013540531079826414 1.4457642690250088e-09 8.839902512717439 0.14496466692734566 EKEDTDVADGCRET(ph)PTK ddPTM_A549_PD325901_60min_R1 1 EKEDTDVADGCRETPTK 17 2 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 EKEDTDVADGCRET(0.942)PT(0.058)K 96.447 8.035300000000001e-07 76887000.0 12692.0 14032.0 14111.0 12093.0 15015.0 11875.0 12978.0 14219.0 11172.0 13102.0 14298.0 True False 13980.482496643424 15214.525885308274 15068.657316336285 12839.957144804319 13960.39819893795 11778.293937143708 13471.884891834092 13935.390890410295 10702.479691676532 12274.737483998688 12539.436642489693 1.1149211001450232 1.213334085022136 1.2017013001426529 1.0239660290077401 1.1133194095525274 0.939300087631779 1.0743612552883606 1.1113251167273681 0.8535056236427193 0.9788906658219337 1.0 13.614184913387701 -7.055532904864156 0.5937317430009581 0.9403008893589038 1.1921165688482291 0.4325764823116077 0.07895917018385587 0.5861701070083208 0.36779395758264033 0.01860788555524333 0.06897724734718719 8.799684372531794e-08 7.055532904864156 0.2518156794893254 EKEDTDVADGCRET(ph)PTKTLEGDGDQER ddPTM_A549_MK2206_60min_R1 4 EKEDTDVADGCRETPTKTLEGDGDQER 27 3 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 EKEDTDVADGCRET(1)PTKTLEGDGDQER;EKEDTDVADGCRET(0.999)PT(0.001)KTLEGDGDQER;EKEDTDVADGCRET(0.994)PT(0.005)KT(0.001)LEGDGDQER;EKEDTDVADGCRET(0.991)PT(0.009)KTLEGDGDQER 160.27 2.3298000000000004e-41 252333000.0 6505.200000000001 7746.099999999999 7617.9 6236.3 8856.3 7754.9 7175.9 7227.599999999999 10884.300000000001 10882.500000000002 10753.499999999998 True False 7603.118723129759 8140.343403731827 8698.232769503815 7764.193779958142 7553.550001869668 8575.518370713993 8479.668143645877 8252.134433596691 8419.023428655519 8424.135691775511 8083.109168498293 0.940618091954125 1.0070807203070558 1.0760998754542124 0.960545455728467 0.9344857089531295 1.0609182917057127 1.0490602028107034 1.0209109219701162 1.0415575557814263 1.0421900182427668 1.0 12.98069461714082 -7.281257189086005 24.982538641786245 1.025222401819675 0.9889008578128318 0.27798047318654673 0.03940739957224072 1189.971517824343 1500087.2443209288 0.006162295360790295 0.009860449036585305 5.2329045233057584e-08 7.281257189086005 -0.036321544006843176 EKEDTDVADGCRET(ph)PTKTLEGDGDQER ddPTM_A549_PD325901_60min_R1 2 EKEDTDVADGCRETPTKTLEGDGDQER 27 3 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 EKEDTDVADGCRET(0.961)PT(0.038)KT(0.002)LEGDGDQER;EKEDTDVADGCRET(1)PTKTLEGDGDQER 167.95 8.1381e-49 298800000.0 7503.4 7844.599999999999 8300.8 7191.2 8057.4 8937.3 7871.299999999999 8981.099999999999 6520.7 7143.0 9084.5 True False 8265.139644288862 8505.69197262609 8864.142204765376 7635.384091599839 7491.476020520984 8864.517591952368 8170.84662884063 8801.964914963348 6246.6576553450695 6691.989760967994 7967.164091390236 1.0374004538478925 1.0675934215811893 1.1125843654135936 0.9583565750642771 0.9402939282519226 1.1126314822022887 1.0255652494556382 1.1047801719654857 0.7840503325512723 0.8399462699908156 1.0 12.959850573575613 -8.74831603229159 24.997198231387024 0.898023760501826 1.0431547326536055 0.5109958599080799 0.07318603947685054 189.61948054648076 361184.7166375042 0.015542040148140599 0.01757108979027904 1.7851880363759016e-09 8.74831603229159 0.1451309721517795 EKEEETKT(ph)SNGDLSDSTVSADPVVK ddPTM_A549_MK2206_60min_R1 1 EKEEETKTSNGDLSDSTVSADPVVK 25 2 A0A087X256;Q2M389 A0A087X256 KIAA1033 WASH complex subunit 7 1 EKEEET(0.114)KT(0.443)S(0.443)NGDLSDSTVSADPVVK 140.55 4.6397000000000005e-27 27307000.0 7089.0 7601.0 6454.1 7062.4 10442.0 8291.6 7252.1 7346.5 13340.0 10149.0 10391.0 True False 8285.449890590126 7987.858433504037 7369.388429574366 8792.688317043187 8905.995632433758 9169.011608481369 8569.712697297107 8387.888872712665 10318.5112996026 7856.333851213381 7810.627922989333 1.0607917791350976 1.0226909426824768 0.9435078078529066 1.1257338595227813 1.1402406721001759 1.1739147862227377 1.0971861394233786 1.0739071116195738 1.3210860127175836 1.0058517610459359 1.0 12.931222820861294 -6.389524388646444 6.069093133852876 1.1452954844687462 1.0110060291899747 0.18359418273298544 0.08891501515762777 0.2822565946079474 12.762634861546731 0.01627721866329093 0.03819398739331265 4.0782665883353926e-07 6.389524388646444 -0.13428945527877145 EKEEETKT(ph)SNGDLSDSTVSADPVVK ddPTM_A549_PD325901_60min_R1 2 EKEEETKTSNGDLSDSTVSADPVVK 25 2 A0A087X256;Q2M389 A0A087X256 KIAA1033 WASH complex subunit 7 1 EKEEET(0.029)KT(0.569)S(0.401)NGDLSDSTVSADPVVK;EKEEET(0.098)KT(0.447)S(0.447)NGDLS(0.007)DS(0.001)TVSADPVVK 157.43 8.663999999999999e-41 51014400.0 7701.4 7003.9 8046.0 8480.5 8254.0 8660.8 8032.9 8754.4 8577.900000000001 9121.0 10490.6 True False 8483.240458528968 7594.143233189191 8592.049944528502 9004.321224387091 7674.267514754166 8590.269316279091 8338.596405271544 8579.786624306062 8217.40069345078 8545.098503400399 9200.322705392537 0.9220590114254069 0.8254213983970449 0.9338857146274325 0.9786962384601396 0.8341302539590365 0.9336921748673144 0.9063373831859275 0.9325527917925354 0.893164398313372 0.9287824761181371 1.0 13.167468749886567 -10.873864584203815 0.6846110916052788 1.01413464987917 0.9046892858549058 0.11317809905458331 0.04717207008512811 0.8085957884140766 0.5261979829218215 0.05397000615320798 0.00798410869184764 1.3370123405550448e-11 10.873864584203815 -0.10944536402426408 EKEEETKTS(ph)NGDLSDSTVSADPVVK ddPTM_A549_PD325901_60min_R1 1 EKEEETKTSNGDLSDSTVSADPVVK 25 2 A0A087X256;Q2M389 A0A087X256 KIAA1033 WASH complex subunit 7 1 EKEEET(0.007)KT(0.4)S(0.59)NGDLS(0.002)DST(0.001)VSADPVVK 151.73 2.3501999999999996e-33 39589000.0 4317.9 4031.7 5110.7 4326.9 4935.1 3730.6 4847.8 4151.0 4244.0 4869.9 4968.7 True False 4756.250029330026 4371.465508252378 5457.542835135697 4594.162785897116 4588.475601170739 3700.219230476488 5032.285681817948 4068.205048603495 4065.6394389075554 4562.413682897663 4357.581399184399 1.0914885101676461 1.0031861961478397 1.2524247593302964 1.0542919030168887 1.0529867788653486 0.8491451774530366 1.1548345792828638 0.9335924394584881 0.9330036702627091 1.0470059569630994 1.0 12.089311898663725 -6.889848723195302 2.96841480397524 0.9724025087049928 1.106183978594448 0.23860112505432418 0.09231353414660128 0.22684409472373632 4.024573594323833 0.012362951802524686 0.024966947993506555 1.288698362878508e-07 6.889848723195302 0.13378146988945527 EKEEKESEDKPEIEDVGS(ph)DEEEEK ddPTM_A549_PD325901_60min_R1 1 EKEEKESEDKPEIEDVGSDEEEEK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EKEEKESEDKPEIEDVGS(1)DEEEEK 196.32 6.392499999999999e-62 61116000.0 7777.6 8971.4 8578.3 8041.4 8909.3 7710.6 8187.1 8059.1 8660.7 9045.3 10136.0 True False 8567.1762264335 9727.451363131042 9160.475023508432 8538.099014655543 8283.541503416442 7647.807430041283 8498.664570653018 7898.354928258358 8296.720897395538 8474.17821431944 8889.336257397927 0.9637588204972765 1.0942832042196193 1.030501576074913 0.9604877987993676 0.9318515200190197 0.8603350361143767 0.956051647115972 0.8885202111333285 0.9333341272235934 0.9532970706634051 1.0 13.117859985617084 -6.274832695308673 4.56487112573243 0.9502499962865794 1.0369120836743548 0.4246966227536031 0.04642470100904195 0.16865228172080876 9.428451781714799 0.0072872279403314345 0.01852076072078623 5.310889979890425e-07 6.274832695308673 0.08666208738777548 EKEELMLR ddPTM_A549_PD325901_60min_R1 2 EKEELMLR 8 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 61.65 0.010848 8446400.0 3317.1 3003.7 3311.2 2866.1000000000004 3534.7 4030.2 3255.8 3749.8 3399.7 3749.8 4036.3 False True 3653.849550080043 3256.8323404860666 3535.917943863132 3043.132487614626 3286.4348660530095 3997.379387408549 3379.701250642124 3675.0072973388055 3256.8224317752124 3513.036988055127 3539.8606882138197 1.0322015107107905 0.9200453428378939 0.9988861865768291 0.8596757770007503 0.9284079672952649 1.1292476567561163 0.9547554404881083 1.0381785106896904 0.9200425436568732 0.9924223853644851 1.0 11.789476868592423 -5.221080299104878 20.902485331955432 0.968086068656823 1.0322030333056758 0.04961847199810121 0.06846787824813878 5188.647620028528 2686797.2228170554 0.009105329096079967 2.4810124122678876 6.010625934266851e-06 5.221080299104878 0.06411696464885275 EKEES(ph)PQPR ddPTM_A549_MK2206_60min_R1 3 EKEESPQPR 9 1 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2;F5H8B7 E7ENF1 C12orf43 Uncharacterized protein C12orf43 1 EKEES(1)PQPR;EKEES(1)PQPR;EKEES(1)PQPR 88.021 0.00093902 515240000.0 5771.83 6036.4 5612.2 5187.0 3918.09 2387.6000000000004 1884.9299999999998 2134.3 4120.1 8123.1 7920.2 True False 6745.973796304804 6343.626976450964 6408.094350018941 6457.815232853277 3341.744151262438 2640.25424723939 2227.3973820708793 2436.8435610196207 3186.9039284477294 6288.086068262034 5953.395753600246 1.1331304142220437 1.0655476704391322 1.0763763430549231 1.0847280275207623 0.5613173203279083 0.4434871049254079 0.37413897450440564 0.4093199346853379 0.5353085970339678 1.0562183883810157 1.0 12.539497085760681 -6.7508475770288365 24.439022651102864 0.6774479024800912 1.087233837220183 0.5132380106879609 0.21373824698369914 138.008838323562 318431.88003091357 0.03672918568944498 0.07580210630491789 1.7748122718866103e-07 6.7508475770288365 0.40978593474009184 EKEES(ph)PQPR ddPTM_A549_PD325901_60min_R1 3 EKEESPQPR 9 1 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2;F5H8B7 E7ENF1 C12orf43 Uncharacterized protein C12orf43 1 EKEES(1)PQPR;EKEES(1)PQPR;EKEES(1)PQPR 102.4 0.00055815 2305270000.0 13589.699999999999 13207.8 14070.1 12887.5 16340.800000000001 14970.3 14378.6 14434.9 14488.2 14379.2 15392.9 True False 14969.316339791609 14320.867658778132 15024.98159638459 13683.5316053639 15193.078580699652 14848.386840187144 14925.785491271827 14146.98459554002 13879.311338072677 13471.294858030371 13499.670883632658 1.108865280407746 1.06083087374679 1.1129887332735835 1.0136196447540184 1.1254406653068945 1.0999073213103072 1.1056406944978359 1.0479503328256825 1.0281222007345605 0.9978980209334813 1.0 13.720636614948601 -8.658143429859518 1.8171931030790895 1.0112941892225922 1.088171789774781 0.5856881421805975 0.029920677939145282 0.17138455700429855 1.1098228519443427 0.005326958990598441 0.005951872620216482 2.1971341286264933e-09 8.658143429859518 0.07687760055218873 EKEGS(ph)RGEEDTGQEEGGSR ddPTM_A549_MK2206_60min_R1 2 EKEGSRGEEDTGQEEGGSR 19 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 EKEGS(0.761)RGEEDT(0.239)GQEEGGSR;EKEGS(1)RGEEDTGQEEGGSR 73.546 0.00017316 11201200.0 763.2199999999999 789.3499999999999 757.3699999999999 770.95 934.3599999999999 743.01 775.96 693.84 1002.0699999999999 1217.6399999999999 1138.3600000000001 True False 892.032877062518 829.5245434135521 864.7764544873394 959.8327846092609 796.9168817392077 821.6348250298785 916.9418878110698 792.1939447958832 775.1027449769704 942.5742783122921 855.6737948622987 1.0424917561090794 0.9694401632891484 1.0106380020981074 1.1217274507789785 0.9313325785177907 0.9602196888150606 1.071602161146738 0.9258130254221106 0.9058390587989266 1.1015579581515385 1.0 9.740917098283932 -8.283171673239936 24.872879904700188 0.9520635533797419 1.0121428245790065 0.0 0.07070401074845575 959.2556382319825 1097877.2359208586 0.009734631759019506 0.011773947879349725 5.20988727593138e-09 8.283171673239936 0.060079271199264594 EKEGS(ph)RGEEDTGQEEGGSR ddPTM_A549_PD325901_60min_R1 3 EKEGSRGEEDTGQEEGGSR 19 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 EKEGS(0.999)RGEEDT(0.001)GQEEGGSR;EKEGS(0.994)RGEEDT(0.006)GQEEGGSR;EKEGS(0.999)RGEEDT(0.001)GQEEGGSR 66.87100000000001 0.00035414 23833700.0 2036.4099999999999 2111.15 2178.0299999999997 1976.65 2767.34 2472.36 2036.71 1868.4399999999998 2319.83 2535.56 2457.19 True False 2243.1448440741924 2289.064019581569 2325.844213358365 2098.7431812021377 2572.9715852047248 2452.2259198683446 2114.2181135804753 1831.1724984371765 2222.335612526134 2375.4643088786224 2154.971207410775 1.0409163873559866 1.0622248741466518 1.0792924774864605 0.9739077598738797 1.193970284315855 1.1379390645384653 0.98108879891752 0.8497433711132285 1.031260002399892 1.1023183514979638 1.0 11.073452878244122 -7.78005854470477 24.98600592202553 0.9978390826632384 1.0806430956289872 0.250016651912471 0.0760908830485171 268.58055885914234 360420.75825833314 0.011253187325347084 0.015563290008086737 1.659363203289592e-08 7.78005854470477 0.0828040129657488 EKEGS(ph)RGEEDTGQEEGGSRR ddPTM_A549_PD325901_60min_R1 1 EKEGSRGEEDTGQEEGGSRR 20 3 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 EKEGS(0.819)RGEEDT(0.178)GQEEGGS(0.003)RR 43.523 0.016571000000000002 6420800.0 375.5 263.48 278.18 269.96 253.68 330.06 411.76 325.1 204.39 364.88 322.42 True False 413.6204835715103 285.6843842831405 297.0589676322321 286.6348160763562 235.86239194849014 327.37210079104426 427.4297521237177 318.6156254639837 195.80019908537105 341.84141452918965 282.7643839887767 1.4627743343657011 1.0103266198280465 1.0505529849332893 1.0136878344895555 0.834130482139688 1.1577557830056777 1.5116109960322408 1.1267883916972725 0.6924500049240383 1.2089267032398177 1.0 8.143456604552 -8.72864154270757 18.77391663159783 0.8547688078669763 1.1360343437853202 0.05349910805383573 0.22370142179419686 13.21020419602737 7561.105037037357 0.03652799014516535 0.04140974244277736 1.8679207962614167e-09 8.72864154270757 0.2812655359183439 EKEIS(ph)DDEAEEEK ddPTM_A549_MK2206_60min_R1 4 EKEISDDEAEEEK 13 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK 231.23 1.2694e-46 1657273000.0 49462.00000000001 47567.9 45757.700000000004 45358.3 78650.2 60946.09999999999 59018.5 64245.700000000004 76578.6 54624.600000000006 50377.5 True False 57809.97637020291 49988.90293107183 52246.829913378264 56471.08553621146 67080.8597672899 67395.37584925308 69741.39750216197 73352.72471920459 59233.66937089571 42284.864921567685 37867.37640173181 1.5266432973043005 1.320104736085853 1.3797319718983445 1.491285927419805 1.7714683757235967 1.7797741024955414 1.8417277384702164 1.9370955077798817 1.564240119053686 1.1166568413129843 1.0 15.208667848743017 -10.309648034632891 0.8952775328919047 1.029635460370573 1.6215213978002259 0.567779240551729 0.18844161518899075 0.3215749547707804 0.4975426812025815 0.10866513669190886 0.04112082239815183 4.901759118048015e-11 10.309648034632891 0.5918859374296528 EKEIS(ph)DDEAEEEK ddPTM_A549_PD325901_60min_R1 5 EKEISDDEAEEEK 13 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK 254.71 6.302999999999999e-69 1906522100.0 73795.25 72063.8 78100.7 74365.7 78027.8 66034.5 73415.2 72178.9 72891.6 75318.5 77702.3 True False 81286.88945480814 78136.86933392803 83401.08315966175 78959.10039224132 72547.39650929677 65496.73692566865 76209.05561033884 70739.23521624846 69828.219539367 70562.87705606433 68145.4096954628 1.192844680486532 1.1466197016514594 1.2238694217611357 1.1586855335539719 1.0645969674774303 0.9611320442326066 1.118329993919061 1.0380630996625786 1.0246943976333043 1.0354751313610855 1.0 16.056328859285273 -6.805569139778238 3.114778993056504 1.0196427046848808 1.1844992882703307 0.7576739959620713 0.039951007838196155 0.08265876403311145 1.6404708918551967 0.005696680551807257 0.011820233839612152 1.5646991989344582e-07 6.805569139778238 0.16485658358544986 EKEIS(ph)DDEAEEEKGEK ddPTM_A549_MK2206_60min_R1 4 EKEISDDEAEEEKGEK 16 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK 161.66 3.4208e-21 709923000.0 85819.1 90320.5 88129.7 81887.6 129865.1 93617.2 89830.7 95690.3 136622.5 108749.4 113898.5 True False 100303.26600444957 94917.42765995287 100627.81665636713 101950.06567607417 110762.11582125787 103523.70996593192 106151.77540258515 109254.69306425336 105677.72189130117 84182.83501026154 85614.35901131757 1.1715706005716895 1.1086624808743297 1.175361444253351 1.1908056878939797 1.293732933357779 1.2091862996047995 1.2398828494242733 1.2761258079361513 1.2343457699348235 0.9832793935785141 1.0 16.385565161422765 -10.667696190261752 0.9172519727456845 0.9990185019434545 1.2115600904885515 0.7361171026181332 0.050214222127951166 0.27127881126116177 0.4035266607453074 0.03810613254839581 0.009948215914770265 2.149333509819831e-11 10.667696190261752 0.21254158854509697 EKEIS(ph)DDEAEEEKGEK ddPTM_A549_PD325901_60min_R1 4 EKEISDDEAEEEKGEK 16 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK 197.92 6.1702e-40 1106210000.0 170921.0 179701.0 192791.0 181110.0 207280.0 167906.0 172860.0 181210.0 176528.0 202193.0 197677.0 True False 188272.77409461015 194845.03393071453 205874.95660646248 192296.75336934684 192721.36787718008 166538.62920505693 179438.2818926218 177595.6243935049 169109.14205265613 189426.49947352687 173363.9821777476 1.0859970550375153 1.123907235419539 1.1875301548817785 1.1092082158806653 1.111657481884476 0.9606299250458338 1.0350378414164847 1.0244090044690983 0.9754571850989842 1.0926519862661588 1.0 17.403444672125623 -7.185992844426829 5.353056412711165 0.9933412675122294 1.1280156704098412 0.5992821558354418 0.04246244111601419 0.06893669322564926 3.5773793059767915 0.004521633728135499 0.007892682745922048 6.516391305847025e-08 7.185992844426829 0.1346744028976118 EKEIS(ph)DDEAEEEKGEKEEEDK ddPTM_A549_MK2206_60min_R1 2 EKEISDDEAEEEKGEKEEEDK 21 3 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEKGEKEEEDK;EKEIS(1)DDEAEEEKGEKEEEDK 93.552 5.380300000000001e-07 14745200.0 4106.4 4012.5 4570.7 4038.3 5590.0 4331.0 4269.700000000001 4204.3 5935.2 6890.700000000001 6094.2 True False 4799.459928159019 4216.719111226807 5218.893989100808 5027.6836812861775 4767.718405028222 4789.303545314873 5045.449222108007 4800.272400128751 4590.88667656682 5334.086084201011 4580.841948636475 1.047724410048161 0.9205118095117751 1.1392870672288211 1.097545765092967 1.040795220286387 1.0455072667897762 1.1014239911966024 1.0479017730698155 1.002192768937015 1.1644335569771722 1.0 12.161397071518888 -8.734088287826014 4.938622169253733 1.0008945263553224 1.0559284968131857 0.0 0.0715119907636657 0.23655375924542646 14.25758558278552 0.008831729920597137 0.009816181043807297 1.8446403836885505e-09 8.734088287826014 0.05503397045786329 EKEKEDDEEEEDEDAS(ph)GGDQDQEER ddPTM_A549_MK2206_60min_R1 2 EKEKEDDEEEEDEDASGGDQDQEER 25 2 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEKEDDEEEEDEDAS(1)GGDQDQEER;EKEKEDDEEEEDEDAS(1)GGDQDQEER 199.64 1.2109999999999996e-68 11149200.0 1092.18 1133.93 1193.56 1021.26 1639.95 1298.3899999999999 1134.51 1486.18 1461.51 1637.29 2117.5299999999997 True False 1276.513282762691 1191.642193593374 1362.8247554272123 1271.468745846103 1398.715527428629 1435.784767998471 1340.6357816646962 1696.850566235365 1130.48031855189 1267.4250518527106 1591.688860145088 0.8019866914481844 0.7486652846742621 0.8562130385853087 0.7988173930740485 0.878761900300748 0.902051150793123 0.8422725164656192 1.066069260597006 0.7102395115392356 0.7962768877688698 1.0 10.63634263323468 -6.359779347609371 1.1988647915250188 0.8781282363881494 0.7808736578423737 0.15157496667881287 0.09219113448458355 1.031192081074699 2.6832228546451926 0.017620608565281422 0.07495764661182101 4.3673766958404975e-07 6.359779347609371 -0.09725457854577568 EKEKEDDEEEEDEDAS(ph)GGDQDQEERR ddPTM_A549_MK2206_60min_R1 4 EKEKEDDEEEEDEDASGGDQDQEERR 26 3 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEKEDDEEEEDEDAS(1)GGDQDQEERR;EKEKEDDEEEEDEDAS(1)GGDQDQEERR;EKEKEDDEEEEDEDAS(1)GGDQDQEERR;EKEKEDDEEEEDEDAS(1)GGDQDQEERR 80.79 6.2189e-07 15536000.0 1138.74 1757.25 1528.82 1428.2099999999998 1967.28 1537.68 1252.1200000000001 1014.89 2039.7399999999998 2254.45 2289.36 True False 1330.9314724799826 1846.6865191783943 1745.6296646940505 1778.1215141147823 1677.895718040057 1700.3962769706247 1479.6139962961972 1158.7537654702721 1577.7421467954591 1745.168179216475 1720.8487288783429 0.7734157280329282 1.0731254224664322 1.0144004149811936 1.0332817081916144 0.9750396358974082 0.9881149042536417 0.8598164216680547 0.6733617813260978 0.9168395340733051 1.014132241800233 1.0 10.74890456757834 -7.644016749387601 16.01096372828691 0.9265781501664447 0.9849605760690339 0.08520379203923467 0.11183018783712904 2.380015090061559 319.68876653849594 0.017842683409133857 0.02646497366461694 2.2697773119433796e-08 7.644016749387601 0.05838242590258913 EKEKEDDEEEEDEDAS(ph)GGDQDQEERR ddPTM_A549_PD325901_60min_R1 1 EKEKEDDEEEEDEDASGGDQDQEERR 26 3 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEKEDDEEEEDEDAS(1)GGDQDQEERR 110.16 5.3504e-13 4809800.0 554.02 666.39 664.12 496.37 840.22 627.9 519.85 635.6 698.3 699.18 834.57 True False 610.2637025520321 722.5490239959084 709.191176877985 527.0296475619382 781.2058458016414 622.7865905795815 539.6331762228353 622.9224593814457 668.9528794036623 655.0336554771949 731.9231807751175 0.8337810832903991 0.987192430810455 0.9689420905168503 0.7200614236644424 1.0673331113441888 0.8508906493712102 0.7372811661072898 0.8510762819695935 0.9139659693456235 0.8949486403525361 1.0 9.515548427723242 -9.862464601783502 1.0037207048321746 0.9873972476006124 0.88203493432843 0.03440964938593105 0.10182546474961632 0.618622600339294 1.274317771453037 0.032174745267276886 0.018721961015476463 1.3725728312988836e-10 9.862464601783502 -0.10536231327218237 EKEKEKEDDEEEEDEDAS(ph)GGDQDQEER ddPTM_A549_MK2206_60min_R1 1 EKEKEKEDDEEEEDEDASGGDQDQEER 27 3 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEKEKEDDEEEEDEDAS(1)GGDQDQEER 92.81700000000001 1.8484e-09 4359800.0 332.33 308.22 442.86 374.7 221.25 356.23 384.06 593.25 347.19 438.5 370.4 True False 388.41917931158343 323.907081485938 505.66420723591233 466.50151682092235 188.7044180881027 393.92602215366384 453.8387306468369 677.3450042519279 268.5520193485029 339.44254544852345 278.41945748005486 1.3950863306290604 1.1633780354921557 1.8161956488696076 1.6755348963150003 0.67777022409298 1.4148652745718517 1.6300539292565375 2.4328220821292668 0.9645590928850264 1.2191768079744933 1.0 8.12111622793362 EKEKEKEDDEEEEDEDAS(ph)GGDQDQEER ddPTM_A549_PD325901_60min_R1 1 EKEKEKEDDEEEEDEDASGGDQDQEER 27 3 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEKEKEDDEEEEDEDAS(1)GGDQDQEER 47.006 0.0036133000000000003 5081200.0 332.84 309.19 266.08 184.44 395.74 223.54 118.44 173.26 181.01 319.5 195.49 True False 366.62967177614235 335.2465264023992 284.137788869021 195.832439906368 367.9445876288848 221.7195643544507 122.94729901285486 169.80419338015938 173.40277917923098 299.3267154737891 171.44596931321246 2.1384560584585763 1.955406287738043 1.6573022393424326 1.1422399761910074 2.1461256225667897 1.2932328782217917 0.7171197987643793 0.9904239455752165 1.011413565882343 1.7458953200990857 1.0 7.421610176753463 -7.492665620907623 6.377060281724242 0.984782361579996 1.7683733292735822 0.4734504613239021 0.3531164099047269 0.08617925984708927 11.623490504938946 0.03932890600934148 0.061948085127379184 3.216135805364922e-08 7.492665620907623 0.7835909676935862 EKELLK ddPTM_A549_PD325901_60min_R1 1 EKELLK 6 1 A0A2R8Y358;A0A1W2PS94;Q9BXT5 REV__H7C2B1 TEX15 Testis-expressed sequence 15 protein 0 80.18 0.043469 8810800.0 6259.4 6707.9 6467.7 6882.5 7923.5 7667.3 7098.5 7540.2 8377.4 7757.7 7463.7 False True 6894.849680073264 7273.198274377099 6906.6370154395945 7307.616393708407 7366.9806945910605 7604.86005088521 7368.637301948245 7389.8047958275265 8025.327011193248 7267.877498062633 6545.712216292514 1.0533383461178958 1.1111393281656723 1.0551391181312135 1.1163974449593865 1.1254666339064494 1.1618078827169391 1.1257197167341761 1.1289535121073664 1.2260433618236253 1.1103264637838222 1.0 12.676334460027602 -6.291360081235943 18.692968815779597 1.1176029948869846 1.0769991366322975 0.14985943054252893 0.052273799305121486 83.7553031640309 52326.42782446645 0.011393033927890343 0.026493175608747255 5.112577669064751e-07 6.291360081235943 -0.04060385825468704 EKELS(ph)PPPGLPSK ddPTM_A549_MK2206_60min_R1 3 EKELSPPPGLPSK 13 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 EKELS(0.996)PPPGLPS(0.004)K;EKELS(1)PPPGLPSK;EKELS(1)PPPGLPSK 119.8 3.2220999999999996e-06 287538800.0 19729.68 20134.99 20464.3 18292.510000000002 26272.7 21205.4 21203.2 19603.17 28982.7 29505.1 29554.2 True False 23059.5676396358 21159.774987504225 23366.445459372884 22774.175771181985 22408.020633235254 23449.341352994692 25055.54698133369 22381.9793796903 22418.164725861505 22839.877417818105 22215.07648557515 1.038014325748957 0.9524961573390862 1.05182826962335 1.0251675606865396 1.0086852794670946 1.0555597847354243 1.127862287469635 1.007513046116385 1.0091419104686956 1.028125085801467 1.0 14.43925148804434 -4.896336342183296 20.913028645576958 1.0169548224757892 4.139855776134577 0.0 0.04249080093864001 4459.471495325966 766362.7678143472 0.005776682463830932 98686.30000866996 1.269590481773276e-05 4.896336342183296 3.122900953658788 EKELS(ph)PPPGLPSK ddPTM_A549_PD325901_60min_R1 2 EKELSPPPGLPSK 13 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 EKELS(0.962)PPPGLPS(0.038)K;EKELS(1)PPPGLPSK 124.29 1.256e-06 463960000.0 22779.0 23060.0 23531.0 22319.0 26415.0 25568.0 25628.0 26546.0 26341.0 25953.0 28712.0 True False 25091.507310986504 25003.34712907705 25127.95516339799 23697.593939873277 24559.701526802935 25359.78268504338 26603.287564179715 26016.519205065877 25233.979373294977 24314.32315083332 25180.606020363986 0.9964616137790557 0.9929604993960994 0.9979090710952939 0.9411049885260357 0.9753419559061083 1.0071156613361287 1.0564990986581173 1.0331967063868865 1.002119621461367 0.9655972191920207 1.0 14.620025384292353 -7.271459616744116 19.897650249323423 1.008714251454538 0.9801838329941027 0.2532997082386461 0.02550728411529058 49.33801706377046 97973.91071053923 0.00364487611919292 0.005889398769388112 5.352299202842072e-08 7.271459616744116 -0.028530418460435247 EKENQINS(ph)FGK ddPTM_A549_MK2206_60min_R1 2 EKENQINSFGK 11 1 F5H5B4;Q13043-2;Q13043 F5H5B4 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit 1 EKENQINS(1)FGK;EKENQINS(1)FGK 67.275 0.0013129 10849300.0 3541.1 4083.5 3857.7 3787.0 5062.799999999999 4017.8 3729.3 4098.9 6423.3 5704.6 5882.4 True False 4138.75110841708 4291.33270796129 4404.779867800163 4714.81517000489 4318.068826650608 4442.960929200208 4406.865537158904 4679.931627354788 4968.432805902353 4415.926897983236 4421.6377340191 0.9360222065626153 0.9705301442822255 0.9961874157873141 1.0663051687229255 0.9765767994578894 1.0048224654446591 0.9966591119063096 1.0584158877034253 1.1236634714952636 0.9987084342093595 1.0 12.110365114261379 -8.259597705567726 6.496809671957168 1.0600917770300338 0.9943401853524282 0.2273438319098493 0.043690292095660915 0.15584338576919887 36.10240500244425 0.008555247768674997 0.010725520077541033 5.500501588440056e-09 8.259597705567726 -0.06575159167760558 EKENSKREEEEQQEGGFAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 EKENSKREEEEQQEGGFASPR 21 3 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 EKENSKREEEEQQEGGFAS(1)PR 44.743 0.011225 16200000.0 1648.3 1438.8 1559.7 1457.6 2337.2 1727.6 1398.3 1349.9 2417.7 2389.9 2432.1 True False 1926.4927429340794 1512.0287743883193 1780.8889130331324 1814.7120654341497 1993.400976070119 1910.413485311932 1652.3530101116278 1541.2524588953686 1870.0948102735547 1850.0199301423636 1828.1424474547557 1.0537979387854883 0.8270847692932529 0.9741521594843923 0.9926535363591035 1.0903969648784457 1.0450025313791704 0.9038425930168231 0.8430702219300188 1.022948082014729 1.011967055804687 1.0 10.836162773126906 -2.000000065439492 0.0792987481112523 1.0383617262100702 0.8253073759854627 0.0 0.08191427995333568 547.406107337052 3.0768479695594957 1.2382646441406693 12.80317408205572 0.009999998493200124 2.000000065439492 -0.2130543502246075 EKEPGEQASVPLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 EKEPGEQASVPLSPK 15 1 P42858 P42858 HTT Huntingtin 1 EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK 144.57 3.9857e-14 127527000.0 20989.1 24564.0 22094.0 18070.4 29593.0 21243.0 22343.0 21612.0 33058.0 31619.0 34375.0 True False 24531.54694577304 25814.20267867297 25227.261424988144 22497.648811211075 25239.908901610048 23490.920160037833 26402.433887523508 24675.56718397417 25570.41578277832 24476.245939650777 25838.738798263723 0.9494096107903486 0.9990504134206271 0.9763348599151958 0.870694540738298 0.9768243372353022 0.909135710664653 1.021815890228267 0.9549834214676254 0.9896154755237732 0.9472693745135695 1.0 14.657248032634854 -7.769938759507984 24.999947483014953 0.9931468145362263 0.94851147886803 0.1539356392224288 0.03835150745799863 185.77805124062746 546444.4120674148 0.005360496708213759 0.007471524937811043 1.698483141136372e-08 7.769938759507984 -0.04463533566819633 EKEPGEQASVPLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 EKEPGEQASVPLSPK 15 1 P42858 P42858 HTT Huntingtin 1 EKEPGEQAS(0.001)VPLS(0.999)PK;EKEPGEQAS(0.004)VPLS(0.996)PK 113.26 3.8330999999999996e-07 166957000.0 15210.8 16505.4 15766.3 15969.6 19060.5 16824.1 16278.5 18858.2 17850.4 18089.8 19939.7 True False 16754.98921840088 17896.367983706332 16836.295928463805 16956.005922406934 17721.756235155302 16687.09010761258 16897.987225437002 18482.0584070283 17100.209764438114 16947.606940775422 17487.243308172594 0.9581263852245082 1.0233956072048551 0.9627758722036783 0.9696214333841064 1.0134105143303582 0.9542436056696217 0.9663036607685211 1.0568880458357197 0.9778676640500792 0.9691411414659636 1.0 14.09401526005631 EKEPS(ph)RER ddPTM_A549_MK2206_60min_R1 1 EKEPSRER 8 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKEPS(1)RER 72.34 0.0018718 206610000.0 4831.9 5356.1 4618.2 2680.0 335.48 302.29 270.65 391.67 706.28 7833.5 7916.4 True False 5647.406591386998 5628.7026122472025 5273.130203352959 3336.6001203097735 286.13133640766864 334.27812715613805 319.8236016496549 447.1904219390692 546.3087076974011 6063.906909397969 5950.539398474906 0.9490579278971585 0.9459146869424663 0.8861600352909916 0.5607222970685527 0.0480849410863497 0.05617610518498741 0.053746993378721956 0.07515124125615938 0.09180826663166324 1.0190516360503583 1.0 12.538804734970663 -10.96633157344264 1.2732736881022628 0.9951629316613151 0.3709893911218102 0.2856137175261796 0.36193231689174576 0.5322375847390225 1.553536781378409 0.28183461612212585 0.06742489077823606 1.0806086174602935e-11 10.96633157344264 -0.6241735405395049 EKEPS(ph)RER ddPTM_A549_PD325901_60min_R1 2 EKEPSRER 8 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKEPS(1)RER;EKEPS(1)RER 50.292 0.006491299999999999 188995000.0 6802.700000000001 7317.900000000001 6789.3 6249.099999999999 6776.1 5623.7 4826.1 5026.5 6577.8 8397.6 8787.9 True False 7493.305096116942 7934.605115172282 7250.0627253775 6635.092714264172 6300.170112275953 5577.902451731793 5009.759876443253 4926.242514287031 6301.357940915669 7867.374102856623 7707.044011087925 0.9722670696231288 1.0295263792132199 0.9407060235995827 0.8609127837752627 0.8174560964245255 0.7237408328935203 0.6500235199430341 0.6391870225730867 0.8176102188919732 1.0208030590636352 1.0 12.91196191415798 -6.110556580359081 2.8634167799564603 0.850130692430799 1.0000079435148252 0.2502092289388296 0.11916333839369059 0.3945654087366458 6.186357429024902 0.020178324242177196 0.06405990849034025 7.75252935981473e-07 6.110556580359081 0.14987725108402628 EKEPS(ph)RERDIAK ddPTM_A549_MK2206_60min_R1 1 EKEPSRERDIAK 12 3 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKEPS(1)RERDIAK 77.222 0.00032122 18192000.0 2373.1 2456.4 1936.6 2346.7 2056.6 1350.7 1345.7 1306.9 1855.1 3725.1 4057.8 True False 2773.6212632754155 2581.420267867298 2211.2390004359554 2921.641605347365 1754.076864361545 1493.630177477903 1590.1962709770569 1492.1570772133925 1434.922811985967 2883.597322805693 3050.136270417295 0.9093433923514346 0.8463294879327242 0.7249640030454875 0.9578724838243537 0.5750814746783646 0.48969293338279496 0.5213525331310851 0.48920997126769283 0.4704454767818136 0.9453995058427939 1.0 11.574657983817456 -6.762868725004196 24.99938776232163 0.6768131702915839 0.849058680164784 0.2397368906521261 0.1795914477239641 69.36222184586425 1213187.3954732206 0.03376860822194181 0.06636887505317816 1.7263596430512455e-07 6.762868725004196 0.1722455098732001 EKEPS(ph)RERDIAK ddPTM_A549_PD325901_60min_R1 2 EKEPSRERDIAK 12 3 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKEPS(1)RERDIAK;EKEPS(1)RERDIAK 105.31 4.8497e-05 66571000.0 5762.1 6200.4 6668.2 7528.3 6605.9 11932.900000000001 9412.5 10815.0 8522.9 7994.3 9404.099999999999 True False 6347.064150166174 6722.9294683056905 7120.744151144046 7993.305992990192 6141.9243731178285 11835.722418740392 9770.697838217635 10599.286340796636 8164.71215218312 7489.53853368423 8247.455317501563 0.7695784827954567 0.8151519722743156 0.8633868116912895 0.9691845163474785 0.7447053832573449 1.4350756643233125 1.184692424763268 1.2851583831323532 0.9899674309064935 0.9081029536214654 1.0 13.009733341339103 EKEQNEAEERSS(ph)R ddPTM_A549_MK2206_60min_R1 1 EKEQNEAEERSSR 13 2 Q14966-3;Q14966;Q14966-5;A0A096LPK8 Q14966-3 ZNF638 Zinc finger protein 638 1 EKEQNEAEERS(0.078)S(0.922)R 83.38600000000001 9.405299999999999e-05 11098000.0 1367.0 1581.9 1288.0 1399.0 996.4 457.61 472.53 420.99 718.12 2048.4 2051.2 True False 1597.7161800587817 1662.411953158801 1470.657767510851 1741.7550628034974 849.8308799230989 506.0339864630663 558.3825844726077 480.6666217278032 555.4669666019961 1585.665017324415 1541.8304297599575 1.0362463661503456 1.0782067347170055 0.953838852265883 1.1296670692085546 0.551183102577244 0.3282033981790391 0.3621556389696761 0.3117506390132906 0.3602646282499917 1.0284302259952685 1.0 10.590428391292123 -6.764343211718621 24.998602230784613 0.5989759692386263 1.0447087937663373 0.48365584494874536 0.23990294300484313 67.02821010769622 577042.2984232904 0.04270544484177431 0.08328672255527889 1.7205083642382386e-07 6.764343211718621 0.445732824527711 EKEQNEAEERSS(ph)R ddPTM_A549_PD325901_60min_R1 1 EKEQNEAEERSSR 13 2 Q14966-3;Q14966;Q14966-5;A0A096LPK8 Q14966-3 ZNF638 Zinc finger protein 638 1 EKEQNEAEERS(0.086)S(0.914)R 70.584 0.00055493 14356000.0 2121.1 2294.4 1861.5 1937.0 2291.6 2117.9 1952.8 2283.2 2085.4 2156.3 2074.4 True False 2336.4325105287094 2487.7571401974997 1987.83258410885 2056.644090753821 2130.6459215908235 2100.652524587507 2027.1148726131623 2237.65978486425 1997.7578901738482 2020.1508500035393 1819.2619507050372 1.2842749278756957 1.3674540597264697 1.0926588022898434 1.1304826608157161 1.1711595027671042 1.1546729286419801 1.1142512334892585 1.2299821826082094 1.0981144795556443 1.1104232951283621 1.0 10.829137572442207 -2.0000000037987795 0.07378214961755841 0.8253425287558105 2.0019200515424678 0.4082109459657024 0.07440906818077828 93.59181621044857 0.493189898466919 1.278289567092885 11.335589142868036 0.00999999991252987 2.0000000037987795 1.1765775227866573 EKEVDGLLTSEPMGS(ph)PVSSK ddPTM_A549_MK2206_60min_R1 12 EKEVDGLLTSEPMGSPVSSK 20 1 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.999)PVSSK;EKEVDGLLTSEPMGS(0.999)PVS(0.001)SK;EKEVDGLLTSEPMGS(0.981)PVS(0.016)S(0.003)K;EKEVDGLLTSEPMGS(0.995)PVS(0.004)S(0.001)K;EKEVDGLLTSEPMGS(0.996)PVS(0.003)S(0.001)K;EKEVDGLLTSEPMGS(0.998)PVS(0.001)SK;EKEVDGLLTSEPMGS(0.999)PVSSK;EKEVDGLLTSEPMGS(0.999)PVS(0.001)SK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(1)PVSSK 180.83 3.761800000000001e-37 650363300.0 32209.590000000007 36896.5 32899.399999999994 31952.2 45508.99999999999 33263.8 33437.2 34588.7 48755.8 46226.799999999996 48409.7 True False 37645.78134313059 38774.37425230652 37565.02962457022 39780.490434388754 38814.68638540778 36783.75323727662 39512.30642187267 39491.754148451204 37712.68914701385 35784.13377409308 36388.23545024897 1.0345591336683795 1.065574457583137 1.0323399626214411 1.093223948404362 1.0666822918213863 1.0108693862764633 1.0858538737305639 1.0852890682881684 1.0363978544267614 0.9833984344478085 1.0 15.151184472803834 -9.619728721789269 1.0028620750282087 1.0064732148368662 1.058643772430634 0.4724717703609672 0.02576205474826925 0.309870760665518 0.6492880154775124 0.007350588056071774 0.00495820393070852 2.400331796888143e-10 9.619728721789269 0.05217055759376765 EKEVDGLLTSEPMGS(ph)PVSSK ddPTM_A549_PD325901_60min_R1 6 EKEVDGLLTSEPMGSPVSSK 20 1 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EKEVDGLLTSEPMGS(0.999)PVS(0.001)SK;EKEVDGLLTSEPMGS(0.999)PVSSK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.998)PVS(0.002)SK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.998)PVS(0.002)SK 188.23 1.8935e-44 1243157000.0 23705.100000000002 23603.2 24335.9 24568.5 28615.6 27009.300000000003 27059.9 29591.0 26632.7 29632.200000000004 30273.3 True False 26111.624301227705 25592.324499437596 25987.480517654887 26086.040445888106 26605.738974460775 26789.34521570489 28089.679302245462 29000.78429130956 25513.420236709047 27761.217834937106 26549.87601826013 0.9834932669090052 0.9639338610031941 0.9788173963517403 0.9825296520385627 1.002104075972416 1.0090195975785372 1.0579966280417394 1.0923133603849515 0.9609619351578802 1.0456251402395949 1.0 14.696417503544644 -6.583519689661934 3.1560551669164827 0.9988548592869619 0.9746812496351142 0.06779740205121265 0.03836463830544917 0.6281880753902293 12.685058120863706 0.006160734045959653 0.014077129075080281 2.6090374340841217e-07 6.583519689661934 -0.024173609651847783 EKFEEMIQQIK ddPTM_A549_PD325901_60min_R1 1 EKFEEMIQQIK 11 1 E7ENZ3;B7ZAR1;E9PCA1;P48643-2;P48643 E7ENZ3 CCT5 T-complex protein 1 subunit epsilon 0 54.471000000000004 0.019071 1399800.0 1029.8 1262.1 950.67 1298.4 1186.4 1396.5 1289.9 1167.0 1736.0 1622.8 1345.4 False True 1134.3445379013078 1368.4615963403344 1015.1881830431159 1378.5992191196494 1103.071356857808 1385.1273670081 1338.987850360364 1143.7232695062112 1663.0419571026175 1520.336131051219 1179.924329193288 0.9613705810073914 1.1597875918669707 0.860384143224844 1.168379348582629 0.9348661855391827 1.1739120321004899 1.134808239165496 0.9693191683641039 1.409447975566057 1.2885030789141112 1.0 10.204478624420267 -7.619486798714265 1.185363032158978 1.1809976178844073 1.0234808498663526 0.18489072279153984 0.14328349530115264 0.7046088987726392 1.9949656483809295 0.029728048240255676 0.052387900180195845 2.4016692705180952e-08 7.619486798714265 -0.1575167680180547 EKFPEFCSSPS(ph)PPVEVK ddPTM_A549_MK2206_60min_R1 1 EKFPEFCSSPSPPVEVK 17 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 EKFPEFCS(0.012)S(0.012)PS(0.975)PPVEVK 82.037 5.7093000000000004e-05 2962600.0 2440.6 2441.2 2209.4 1986.0 3266.1 2909.5 3040.3 2410.1 3869.9 3179.2 3183.5 True False 2852.513613058857 2565.4466527917466 2522.7261424988155 2472.5700891549272 2785.6610165765064 3217.3813588302064 3592.683155719361 2751.7390556216956 2993.3738289604285 2461.0165119497074 2392.9490898697486 1.1920494360430054 1.0720857638184802 1.054233102232915 1.0332731689204104 1.164112111022025 1.3445256200604472 1.5013621355040676 1.1499363138442182 1.2509141300299713 1.0284449938229416 1.0 11.224573988444583 -4.879908115475751 17.974213314233182 1.1513123628870747 7.066738842854789 0.0008610330096807672 0.1469628142549969 1690.852902068374 254562.30215315672 0.021983517681550865 2421.7469496398116 1.318535674192917e-05 4.879908115475751 5.915426479967714 EKFPEFCSSPS(ph)PPVEVK ddPTM_A549_PD325901_60min_R1 2 EKFPEFCSSPSPPVEVK 17 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 EKFPEFCS(0.099)S(0.078)PS(0.823)PPVEVK;EKFPEFCS(0.089)S(0.089)PS(0.823)PPVEVK 81.692 6.1078e-05 8771000.0 5222.6 5253.6 5769.200000000001 5187.1 6121.2 6006.9 5803.1 6341.299999999999 5289.0 5706.1 5719.5 True False 5752.794507325086 5696.339309510806 6160.732605017878 5507.495386241171 5691.268028993604 5957.981797981349 6023.940146078165 6214.817796846386 5066.721722992943 5345.815872190882 5016.0377588977335 1.1468802237623612 1.1356252849983663 1.228206983507973 1.0979772583393461 1.1346142717721988 1.1877864729811376 1.2009359649242186 1.2389894365970806 1.0101043824890081 1.0657447429912523 1.0 12.292332492923546 -8.778434136105162 24.794855923705104 1.00477148155451 1.1699397896186121 0.6796480917655972 0.04405251399743873 68.9768853340429 100634.87781176403 0.006973740083523868 0.007433658055279711 1.665581406081641e-09 8.778434136105162 0.1651683080641022 EKFS(ph)FEPK ddPTM_A549_MK2206_60min_R1 3 EKFSFEPK 8 1 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 EKFS(1)FEPK;EKFS(1)FEPK;EKFS(1)FEPK 82.171 0.00099991 116997000.0 7831.5 11208.5 10980.7 12362.900000000001 19138.7 16127.300000000001 14864.400000000001 16995.1 24827.6 21637.8 23813.300000000003 True False 9153.265738208003 11778.964774625709 12537.92837554845 15391.811054991676 16323.422582882587 17833.880181564673 17565.06907208989 19404.207470310903 19204.188241530253 16749.805951895236 17899.800396354723 0.5113613300443315 0.6580500627830734 0.7004507367636226 0.859887301208465 0.911933218328336 0.9963172653699829 0.9812997174910955 1.0840460251312383 1.0728716419341284 0.9357537838972951 1.0 14.127655879396816 -6.083598693536611 0.6989598348715382 1.0388454335801314 0.4517151777280831 0.9371857078335301 0.043988867201863104 0.17426163359692048 0.10643891287278336 0.006348203051880017 0.0647970061270305 8.249000054313674e-07 6.083598693536611 -0.5871302558520483 down EKFS(ph)FEPK ddPTM_A549_PD325901_60min_R1 6 EKFSFEPK 8 1 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 EKFS(1)FEPK;EKFS(1)FEPK;EKFS(1)FEPK;EKFS(1)FEPK;EKFS(1)FEPK;EKFS(1)FEPK 91.936 0.00099991 313095600.0 22305.2 21850.1 23462.700000000004 23276.5 26307.199999999997 25047.5 25617.4 25777.2 26952.5 25350.4 28701.6 True False 24569.607483779626 23691.48460993261 25055.019914676737 24714.23654023302 24459.473026913118 24843.52146447217 26592.284175379154 25263.05352417779 25819.780154843516 23749.771417673666 25171.485154432954 0.9760889090587755 0.941203288744379 0.9953731280041016 0.9818346588850596 0.9717135431957441 0.9869708248063772 1.056444783143675 1.0036377817670687 1.0257551350837315 0.9435188774902735 1.0 14.619502719676674 -7.5359967917329245 24.99299347458078 1.0150194267173802 0.9737867971354486 0.2016166013410361 0.028445785802355326 139.68858049592072 266138.9571796837 0.0029120208004385774 0.004320548867686375 2.9107386205097125e-08 7.5359967917329245 -0.041232629581931635 EKGPTTGEGALDLSDVHS(ph)PPKS(ph)PEGK ddPTM_A549_PD325901_60min_R1 1 EKGPTTGEGALDLSDVHSPPKSPEGK 26 2 O95684;O95684-2 O95684 FGFR1OP FGFR1 oncogene partner 2 EKGPTT(0.001)GEGALDLS(0.016)DVHS(0.983)PPKS(1)PEGK 70.378 5.3266e-05 6050100.0 1799.0 1931.6 1608.1 1942.4 2068.8 2230.2 1753.3 2304.8 2145.2 2652.6 2533.8 True False 1981.6331556461973 2094.3827109507893 1717.235336290863 2062.377636489532 1923.4946249725485 2212.0379906204525 1820.0227909425744 2258.828955919378 2055.044704133949 2485.114383304452 2222.1586630815787 0.8917604258276353 0.9424991769248393 0.7727780040285183 0.9280964814769481 0.8655973387179934 0.9954455671283655 0.819033681608791 1.0165021037638 0.9247965675340731 1.118333458628116 1.0 11.117746114111371 -10.084878161269048 0.1753686378220814 1.0613403105760886 0.8544488180929714 0.3703770263363817 0.07365563047757659 6.6566706458062415 0.45498943349163157 0.3749405285125227 0.13831481035248264 8.224733575868993e-11 10.084878161269048 -0.20689149248311722 EKGS(ph)ETDSAQDQPVK ddPTM_A549_MK2206_60min_R1 2 EKGSETDSAQDQPVK 15 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 EKGS(0.996)ET(0.004)DSAQDQPVK;EKGS(0.951)ET(0.041)DS(0.008)AQDQPVK 149.94 1.7158e-14 25311000.0 7453.0 7223.4 6210.5 4619.5 6744.1 5517.4 5336.7 5514.8 7287.0 8373.5 8680.4 True False 8710.884191644542 7591.040206364041 7091.242286588615 5751.277707377233 5752.051823855251 6101.247605846292 6306.309310636292 6296.539788366682 5636.5061349478365 6481.920534351681 6524.817113147591 1.335038827999025 1.1634104182120288 1.0868108888906127 0.8814465766079993 0.8815652184740614 0.9350833134544413 0.9665112755312325 0.9650139887720489 0.8638565705681166 0.9934256274080889 1.0 12.67172174900319 -5.689643549733666 1.5479338962129403 0.9322017970765106 1.3422593339016695 0.8607940725341114 0.05021307596619494 0.15800229249317171 0.5878012049062417 0.008413827363036435 0.07690086680119504 2.0434144034105696e-06 5.689643549733666 0.4100575368251589 EKGS(ph)PGQNDQELK ddPTM_A549_PD325901_60min_R1 2 EKGSPGQNDQELK 13 1 Q3T7B4;Q9H3H1-6;Q9H3H1-3;Q9H3H1-2;Q9H3H1-5;Q9H3H1-4;Q9H3H1 Q3T7B4 TRIT1 tRNA dimethylallyltransferase, mitochondrial 1 EKGS(1)PGQNDQELK;EKGS(1)PGQNDQELK 123.42 1.6337000000000001e-06 39055000.0 13162.7 13831.3 12607.7 14131.5 16550.0 15165.8 13780.099999999999 14474.2 14231.3 16227.9 16748.9 True False 14498.967614132413 14996.912191951576 13463.334338259012 15004.370660034925 15387.58509440047 15042.294753004964 14304.50924626005 14185.500726209759 13633.207951678858 15203.267624529251 14688.891480024873 0.9870702383395824 1.0209696362959435 0.9165657161105403 1.0214773987839085 1.047566122693856 1.024059220088914 0.9738317738756844 0.9657298336978208 0.9281304835166345 1.0350180369433506 1.0 13.842437904333057 -7.922330940094168 6.8032541509696145 0.9653007101193809 1.002641364750572 0.014948448848652873 0.040752665352055545 0.31269957876565213 22.54864188423286 0.00631883313852321 0.008750349097399211 1.1958289411751938e-08 7.922330940094168 0.037340654631191184 EKGS(ph)TLDLSDLEAEK ddPTM_A549_MK2206_60min_R1 2 EKGSTLDLSDLEAEK 15 1 O00767 O00767 SCD Acyl-CoA desaturase 1 EKGS(0.854)T(0.144)LDLS(0.001)DLEAEK;EKGS(0.905)T(0.095)LDLSDLEAEK 119.38 1.8920000000000003e-07 5574700.0 2750.3 2368.3999999999996 1921.35 1911.79 3238.8 2124.42 2304.7 2580.1 3750.5 3068.8 3491.4 True False 3214.4834016208224 2488.9414437456862 2193.8263211234257 2380.178635823514 2762.376810412417 2349.2247143241348 2723.4341574799896 2945.8370762248624 2901.017738317809 2375.555948625838 2624.3890222620507 1.2248501934557512 0.9483889098119997 0.8359379278429124 0.9069458131523339 1.052579014383862 0.8951510977969483 1.0377402642587525 1.122484910291899 1.1054069018385553 0.9051843794782624 1.0 11.357765876145862 -7.977499169373853 23.68482711538774 1.0577381975917797 0.9695125282820183 0.043692435042220756 0.10991764303357128 194.9702143982299 205228.16599194513 0.015866918865569103 0.021922224587870253 1.0531757014183504e-08 7.977499169373853 -0.08822566930976139 EKGS(ph)TLDLSDLEAEK ddPTM_A549_PD325901_60min_R1 1 EKGSTLDLSDLEAEK 15 1 O00767 O00767 SCD Acyl-CoA desaturase 1 EKGS(0.5)T(0.5)LDLSDLEAEK 149.36 1.9634e-14 6333000.0 2043.8 1856.4 2387.8 1967.4 2609.3 2186.0 2331.7 1913.2 2360.7 2555.8 2324.6 True False 2251.285071433962 2012.845343036367 2549.8504670078487 2088.9218297104117 2426.031769596324 2168.1979407659915 2420.4341194551976 1875.0397251236343 2261.487988555388 2394.426351824442 2038.6889368535135 1.1042808104450532 0.9873234247020376 1.2507305165167844 1.0246398025460555 1.1899960438989925 1.063525632366633 1.187250333143449 0.9197282092566543 1.1092854567827004 1.1744932287315832 1.0 10.99342595040713 -13.88829581890381 0.24635381938092757 0.6835284422927714 1.1072281685493286 0.0 0.10418051029834677 37.268023948506126 0.7731626229032127 5.821521118594562 0.045835574929877346 1.2933146024457957e-14 13.88829581890381 0.42369972625655716 EKGSETDS(ph)AQDQPVK ddPTM_A549_MK2206_60min_R1 1 EKGSETDSAQDQPVK 15 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 EKGS(0.002)ET(0.015)DS(0.982)AQDQPVK 48.477 0.019856 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EKHKS(ph)PSYQIK ddPTM_A549_MK2206_60min_R1 1 EKHKSPSYQIK 11 2 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 EKHKS(0.828)PS(0.161)Y(0.01)QIK 49.31 0.0058809 3122100.0 1471.3 1848.9 1743.5 1288.3 2345.2 1357.3 1595.9 1239.9 2301.2 2608.8 2250.1 True False 1719.6194701686059 1943.0011127095925 1990.7545168130175 1603.9335578339853 2000.224186667655 1500.9285850971787 1885.8543723357984 1415.6596220344982 1779.9818742612833 2019.4702681097115 1691.338070399221 1.0167213168463176 1.1487952330257483 1.1770293305956998 0.9483222697490604 1.1826282525500802 0.8874208009418849 1.1150073455690996 0.8370057097457447 1.0524104585673633 1.1940074568492618 1.0 10.723949344019898 -6.258723454062554 24.96371897574014 1.0156536341891704 1.1176432844731599 0.10027036868303474 0.11230337172120829 281.214493211951 2584792.1715537887 0.01227664079696072 0.030948844303759486 5.511585462204512e-07 6.258723454062554 0.10198965028398943 EKHKS(ph)PSYQIK ddPTM_A549_PD325901_60min_R1 1 EKHKSPSYQIK 11 2 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 EKHKS(0.974)PS(0.024)Y(0.002)QIK 49.31 0.0058809 4510900.0 1940.9 1842.0 1745.1 1724.2 2486.1 2457.6 2078.0 2186.2 2176.4 2027.2 2657.1 True False 2137.9387391849373 1997.2318044995634 1863.5329801387888 1830.6999180576865 2311.4849125793958 2437.586120414684 2157.079427125231 2142.594525959278 2084.9334766348716 1899.2022460358844 2330.293544744675 0.9174546889195397 0.8570730537376979 0.7996988123412461 0.7856091444729434 0.9919286425490486 1.0460425150779726 0.925668541626406 0.91945262895797 0.8947085148722382 0.8150055817298227 1.0 11.186295985838916 -6.76608847605369 24.997290447060973 0.9547152700010771 0.8383056374763939 0.3452686440089632 0.06596638235692917 79.13241616777087 425482.6758273575 0.008626576868106275 0.016692872789911446 1.7136081694480171e-07 6.76608847605369 -0.11640963252468328 EKHPNSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EKHPNSSPR 9 1 P29374 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 EKHPNS(0.429)S(0.571)PR;EKHPNS(0.122)S(0.878)PR 54.471000000000004 0.0054917 12889900.0 1488.27 1278.53 866.35 419.47 1271.1599999999999 1348.21 950.55 1229.27 1394.75 1921.79 1946.64 True False 1739.4535912919393 1343.6017159568366 989.2114572073177 522.2401688307242 1084.1740478954694 1490.8766873306317 1123.2526308815054 1403.5227869814887 1078.8413519580758 1487.6563042588782 1463.2355634691526 1.1887720847680243 0.9182401996649954 0.6760438865099877 0.3569077883758898 0.7409429315161158 1.0188904128300063 0.7676498978868521 0.9591912758420851 0.7372984766719823 1.0166895484222835 1.0 10.51494632952584 -7.156585973558299 16.83887658039674 0.8799863071083198 0.7551929808912227 0.08454344739806485 0.20699591457105923 6.11280236219404 970.6803145228184 0.03197646697056397 0.05538595598691832 6.972909465023626e-08 7.156585973558299 -0.12479332621709716 EKHPNSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EKHPNSSPR 9 1 P29374 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 EKHPNS(0.113)S(0.887)PR;EKHPNS(0.37)S(0.63)PR 81.92 0.00043347 26783900.0 2417.1 2707.6 2163.87 1988.24 2354.5 1962.91 1571.31 1811.02 2074.6 2830.4 3451.1000000000004 True False 2662.482212625026 2935.7789543230274 2310.7232306073674 2111.0490691793393 2189.1280425840428 1946.9247117607358 1631.1070619038248 1774.8977853822942 1987.4117766158354 2651.688060960914 3026.6365783253727 0.8796834848596748 0.9699806628080149 0.7634624015169612 0.6974901064426359 0.7232873805401769 0.6432634580918077 0.5389173822799401 0.5864258028508791 0.6566403746152646 0.8761170997371887 1.0 11.563499739436239 -4.403530233047956 19.947904770685675 0.7816159702430624 0.7494664002834034 0.0 0.14902458714712383 0.0 0.0 0.024247437005332773 0.0 3.9488420885743824e-05 4.403530233047956 -0.03214956995965901 EKKADRDQS(ph)PFSK ddPTM_A549_MK2206_60min_R1 2 EKKADRDQSPFSK 13 3 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 EKKADRDQS(0.977)PFS(0.023)K;EKKADRDQS(0.974)PFS(0.026)K 43.297 0.016146 27518600.0 3543.2 4403.1 4904.7 3818.0 5911.2 4332.700000000001 3814.3999999999996 3423.8 7213.6 6533.1 6362.9 True False 4141.205537077011 4627.198982839314 5600.260211421168 4753.410171396533 5041.670310519293 4791.183438186508 4507.427105606661 3909.1341349477466 5579.731117752123 5057.2681725649945 4782.816322893738 0.8658508413242735 0.9674632414149931 1.1709126659567919 0.9938517079661939 1.054121666012242 1.0017494117958743 0.9424211178738181 0.8173289273593953 1.1666204054384905 1.057382895587595 1.0 12.2236446724449 -8.807050028210975 24.999986729898986 1.0786817835508498 0.9857194151475615 0.17028364248543537 0.0946804575949403 184.80134623506845 101291.987301584 0.018297514630822118 0.01947922351591823 1.559372861751043e-09 8.807050028210975 -0.09296236840328831 EKKADRDQS(ph)PFSK ddPTM_A549_PD325901_60min_R1 3 EKKADRDQSPFSK 13 3 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 EKKADRDQS(0.998)PFS(0.002)K;EKKADRDQS(0.997)PFS(0.003)K;EKKADRDQS(0.99)PFS(0.01)K 61.265 0.0022588 59081000.0 7576.5 7270.0 9322.599999999999 9259.9 9326.4 13574.099999999999 10561.8 11568.8 11475.0 10193.0 11768.3 True False 8345.660702475489 7882.668414067215 9955.287697347921 9831.862992241253 8671.345838333329 13463.557030078502 10963.735078638727 11338.05120845197 10992.74565538741 9549.41224045174 10320.873705400163 0.8086195937180019 0.7637597977720421 0.9645779980951654 0.95261925229227 0.8401755593420588 1.304497798770079 1.0622874953796015 1.0985553677029873 1.0650983598060797 0.9252523103209012 1.0 13.333277485687903 -6.158783244360067 1.002455471210169 1.050688711901109 0.7704007893627643 0.43143757091992263 0.10984296435452061 0.4815836752163413 0.7632236764239462 0.015858169047150587 0.10269642547926476 6.937719800414743e-07 6.158783244360067 -0.28028792253834467 EKKEESHS(ph)NDQSPQIR ddPTM_A549_MK2206_60min_R1 2 EKKEESHSNDQSPQIR 16 2 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 EKKEES(0.042)HS(0.958)NDQSPQIR;EKKEES(0.006)HS(0.957)NDQS(0.037)PQIR 84.499 2.3116e-05 21445000.0 1661.06 1918.75 1771.92 1484.12 1548.25 1413.75 1151.04 1158.96 2294.39 2677.9 2386.2 True False 1941.4063189820333 2016.406179356121 2023.2049001613552 1847.7294666246783 1320.5044759543725 1563.3520866287015 1360.1690686969107 1323.2461291661436 1774.7143283879482 2072.960530117676 1793.64068423031 1.0823830748548908 1.1241973919773147 1.12798785060429 1.0301558628045835 0.7362146095169723 0.8716082883119758 0.7583286221457386 0.7377431504537807 0.9894480784201862 1.1557278714422272 1.0 10.80867519219975 -6.527331835971453 24.97377479463737 0.9306629607045643 1.1071705313495335 0.3607812447544875 0.12375562978458221 119.81788662484237 671961.0038136924 0.018073190176141726 0.03773644334061243 2.969396306725641e-07 6.527331835971453 0.17650757064496914 EKKEESHS(ph)NDQSPQIR ddPTM_A549_PD325901_60min_R1 2 EKKEESHSNDQSPQIR 16 2 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 EKKEES(0.003)HS(0.975)NDQS(0.021)PQIR;EKKEES(0.02)HS(0.98)NDQSPQIR 109.89 1.0597999999999999e-07 49986000.0 2864.25 2915.62 3509.71 3684.59 4119.6 3950.0 3550.44 4284.4 4204.6 3937.3 5015.7 True False 3155.0265514505963 3161.3295297692816 3747.900026200738 3912.1787559889667 3830.2535078484684 3917.8325096183257 3685.5539370753177 4198.944280953219 4027.8952838903647 3688.6982060561763 4398.80069714195 0.717246988139409 0.7186798737717999 0.8520276966937547 0.8893739510705365 0.8707495000483004 0.8906592454083847 0.8378542677484677 0.9545657032566662 0.9156803322567956 0.838569069167614 1.0 12.10289452110933 -2.619688074532731 0.18099120783652498 0.9997499930956762 2.3495616066583023e-16 0.540212433762734 0.055940174817046155 12.329081795118988 0.15818146016530366 0.041506467213666826 3.2771859635307647 0.0024005564634965353 2.619688074532731 -0.999749993095676 EKKEESHSNDQS(ph)PQIR ddPTM_A549_MK2206_60min_R1 2 EKKEESHSNDQSPQIR 16 2 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 EKKEESHSNDQS(1)PQIR;EKKEESHS(0.011)NDQS(0.989)PQIR 84.249 2.5329e-05 70877000.0 1115.39 1193.9 1308.67 1186.03 1440.1399999999999 1018.3 1263.01 1171.1799999999998 1730.92 1478.38 1646.62 True False 1303.6405633326729 1254.6644104407935 1494.2590843233118 1476.6074032429106 1228.297313741922 1126.0558301071665 1492.4825683337535 1337.1983515883242 1338.8693837112544 1144.4129312204984 1237.718809599913 1.053260686693506 1.0136909940363257 1.2072686241282253 1.1930071610693365 0.9923880159330887 0.9097832410506543 1.2058333094381848 1.0803732974055453 1.0817233876764287 0.9246146397261465 1.0 10.273467878637984 -10.572996378872523 0.7137516902997001 0.9954615215024949 1.083220195658064 0.17692779064033803 0.09186606226208235 1.5545139607196672 1.3131964786344568 0.07887084723612191 0.018138546879880306 2.6730286961611038e-11 10.572996378872523 0.08775867415556915 EKKEESHSNDQS(ph)PQIR ddPTM_A549_PD325901_60min_R1 4 EKKEESHSNDQSPQIR 16 2 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 EKKEESHS(0.001)NDQS(0.999)PQIR;EKKEESHSNDQS(1)PQIR;EKKEESHS(0.001)NDQS(0.999)PQIR;EKKEESHSNDQS(1)PQIR 201.67 3.8185e-40 195856000.0 5396.799999999999 6430.799999999999 5717.18 5939.66 6476.2699999999995 6709.4 6151.67 6786.01 7116.200000000001 6028.18 6237.75 True False 5944.679163085822 6972.746084894559 6105.182214996201 6306.539308253404 6021.399137118605 6654.760870894476 6385.775168172992 6650.657707028138 6817.1308612521025 5647.559686024369 5470.546294355165 1.0866701135899164 1.2745977658738494 1.1160096060782616 1.1528170988628441 1.100694302382898 1.216470990796889 1.1673011843007737 1.2157209443398154 1.246151754219944 1.0323575347222373 1.0 12.417469193878038 -10.909796457783932 1.1589152188804783 0.9998509173743456 1.1813241667042411 0.5252269912807919 0.05787212660176881 0.27646183226946996 0.6586681784036694 0.04006326754950521 0.009486187583666993 1.2308455000415006e-11 10.909796457783932 0.1814732493298955 EKKEESHSNDQSPQIR ddPTM_A549_MK2206_60min_R1 1 EKKEESHSNDQSPQIR 16 2 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 0 33.946999999999996 0.054560000000000004 1281500.0 156.76 318.69 223.64 350.88 345.84 308.6 334.53 320.84 233.33 420.36 408.42 False True 183.21725558596518 334.9099597649522 255.35551484947706 436.845615751602 294.96739413147776 341.25584716789893 395.3097707735415 366.32005253129125 180.48112755144498 325.40038404730103 306.99804218143635 0.5968026840955666 1.09091887813089 0.8317822258246245 1.4229589630197887 0.9608119714234253 1.1115896529601195 1.2876621882165384 1.1932325363651521 0.5878901580902602 1.059942863918946 1.0 8.26208564490067 -8.748194881528775 24.996593737028764 0.8053925589489982 1.0731000372996748 0.07505085276821577 0.23976246681472282 273.78835622874726 516725.6067970221 0.041345585701823555 0.04674625770579163 1.7856861017911656e-09 8.748194881528775 0.26770747835067665 EKKEESHSNDQSPQIR ddPTM_A549_PD325901_60min_R1 1 EKKEESHSNDQSPQIR 16 2 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 0 70.197 0.00043609 2299900.0 357.74 368.23 357.65 498.25 451.44 568.67 503.19 528.82 616.87 690.27 564.11 False True 394.05750144573136 399.2620344032975 381.92227972416356 529.0257708921483 419.73241178345296 564.0389400619374 522.3391708061334 518.2722702487351 590.9450991232102 646.6862343977846 494.7280461879187 0.7965133662465774 0.8070333539401581 0.7719842904946069 1.0693264207851314 0.8484103842861999 1.1400989784348945 1.055810712230628 1.047590235165025 1.1944847349502077 1.3071549902633692 1.0 8.95049187813179 -6.54214924749431 0.897551320080307 1.0905189596831892 0.7687839717784609 0.6028355321914756 0.10672397680072578 0.3411485149191714 0.4805493570843358 0.0153339289181346 0.06926716333387684 2.869794193262712e-07 6.54214924749431 -0.3217349879047283 EKKPAS(ph)PQVVK ddPTM_A549_MK2206_60min_R1 4 EKKPASPQVVK 11 2 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 EKKPAS(1)PQVVK;EKKPAS(1)PQVVK;EKKPAS(1)PQVVK;EKKPAS(1)PQVVK 82.34 0.00014487 47472400.0 6055.420000000001 6415.169999999999 6900.5 5435.42 8487.2 7085.500000000001 6760.01 6278.8099999999995 10537.6 9196.9 9044.6 True False 7077.426855194981 6741.674751593489 7879.094662040859 6767.098144005278 7238.74412292586 7835.282907025752 7988.21631401324 7168.850545549176 8150.850425089391 7119.313902475548 6798.576201738944 1.0410160370615118 0.9916303872374188 1.1589330513094107 0.9953699044035699 1.0647441329074652 1.1524887968486164 1.1749837137914272 1.0544635130684454 1.1989055036265626 1.0471771869902062 1.0 12.73101692488285 -7.015651306115798 23.611695218767682 1.103455748463736 1.0482203542702555 0.13936908065728404 0.06822859360188913 683.8069150764344 1031600.9674857836 0.012274592002783842 0.021712143988086303 9.646031901295688e-08 7.015651306115798 -0.05523539419348045 EKKPAS(ph)PQVVK ddPTM_A549_PD325901_60min_R1 4 EKKPASPQVVK 11 2 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 EKKPAS(1)PQVVK;EKKPAS(1)PQVVK;EKKPAS(1)PQVVK;EKKPAS(1)PQVVK 105.78 3.4727e-05 89236600.0 9875.0 9712.400000000001 10462.4 9885.9 11978.300000000001 10505.3 11312.0 11855.7 10600.1 11212.4 11824.7 True False 10877.502730409218 10530.898033670766 11172.441379522126 10496.5295904921 11136.985530891667 10419.74831982111 11742.484350163919 11619.228762883278 10154.614659840707 10504.447150479838 10370.336862949218 1.0489054380935285 1.015482734345419 1.0773460425802213 1.0121686237593437 1.0739270747010645 1.0047646915934263 1.1323146494996765 1.120429250895027 0.9791981489165279 1.0129321052250255 1.0 13.340175137983415 -8.793810192946086 24.99687264914922 0.9901768861156495 1.059067339557394 0.3276707395260071 0.0399674444010332 142.0126932227979 109662.12376364024 0.006857063054310547 0.007300159489051692 1.607643715187832e-09 8.793810192946086 0.06889045344174449 EKKPGDGEVS(ph)PSTEDAPFQHSPLGK ddPTM_A549_PD325901_60min_R1 3 EKKPGDGEVSPSTEDAPFQHSPLGK 25 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 EKKPGDGEVS(0.825)PS(0.161)T(0.014)EDAPFQHSPLGK;EKKPGDGEVS(0.949)PS(0.048)T(0.003)EDAPFQHSPLGK;EKKPGDGEVS(0.938)PS(0.031)T(0.031)EDAPFQHSPLGK 113.65 4.1950000000000005e-15 24737200.0 5114.3 4636.2 5263.6 5344.9 6237.0 6554.8 5328.700000000001 5096.0 5659.0 6504.5 6486.200000000001 True False 5633.499971051333 5026.908844745317 5620.819548598087 5675.042333851369 5798.934636481917 6501.419882037013 5531.486594476524 4994.356282265337 5421.171909702601 6093.804759935085 5688.438519409477 0.9903420687117056 0.8837062803075115 0.9881129117277672 0.9976450153214457 1.0194246833635305 1.142918194484052 0.9724086101313361 0.8779836971471402 0.9530158216890386 1.0712614259857887 1.0 12.473816970679788 -5.872572905705611 20.884748074954366 0.9860056619133344 0.936689346013135 0.08072045945205675 0.06873593346734597 5.253096350370901 955.022906191325 0.009102355850021069 0.02830057651577179 1.340994801578338e-06 5.872572905705611 -0.04931631590019936 EKKPGDGEVSPSTEDAPFQHS(ph)PLGK ddPTM_A549_PD325901_60min_R1 2 EKKPGDGEVSPSTEDAPFQHSPLGK 25 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 EKKPGDGEVSPSTEDAPFQHS(1)PLGK;EKKPGDGEVSPSTEDAPFQHS(1)PLGK 75.758 1.3577000000000001e-06 8959200.0 1975.3 2627.0 1643.2199999999998 2126.27 2613.7 2709.0 2095.7 2233.0 2336.4300000000003 2456.8 2561.8999999999996 True False 2175.8310018609955 2848.386509457303 1754.73879068458 2257.604868790463 2430.122728775498 2686.938802166086 2175.4530103110433 2188.4610632453873 2238.2379722541873 2301.67722871989 2246.8025412221536 0.9684122044287198 1.2677511517803057 0.7809937715888845 1.0048078668997915 1.0815915881302267 1.1958945002369987 0.9682439691062928 0.974033553502645 0.9961881078506758 1.024423457999067 1.0 11.133657624437076 EKKQS(ph)SDYEELIQVLK ddPTM_A549_PD325901_60min_R1 1 EKKQSSDYEELIQVLK 16 2 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;F8WCI3 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 EKKQS(0.84)S(0.16)DYEELIQVLK 81.723 7.6215e-05 2489000.0 1528.7 1685.8 1432.7 1624.4 1599.3 2058.3 1686.7 2272.0 2165.8 1669.3 1721.1 True False 1683.8924986305394 1827.8682823156153 1529.9316375249798 1724.7354987199321 1486.9706852854788 2041.5378872271892 1750.8882914976543 2226.683177650479 2074.7789577723797 1563.9001131154798 1509.4156109518117 1.115592343429326 1.2109774597885554 1.0135920328531856 1.1426511599627245 0.9851300559610752 1.3525352940664437 1.1599775958283445 1.4751955402437973 1.374557771046279 1.0360964215344979 1.0 10.559774384962036 -7.254193465352004 24.772995738602788 1.2154237147251254 1.0983916668019575 0.18287432916720903 0.14403095598899276 1004.56546292714 3434497.260118695 0.02563531821560195 0.04382903343225058 5.5693759443052986e-08 7.254193465352004 -0.1170320479231679 EKLEATINELV ddPTM_A549_MK2206_60min_R1 1 EKLEATINELV 11 1 P10599;P10599-2 P10599 TXN Thioredoxin 0 103.7 0.00056975 15808000.0 4103.7 3802.5 3444.8 3727.0 5431.8 4153.7 3359.0 4040.8 6191.6 5537.8 6155.5 False True 4796.304234167678 3996.0310082093297 3933.324439069393 4640.115167311387 4632.78941546195 4593.241776997092 3969.2868203997414 4613.595774431001 4789.212485953483 4286.807133830867 4626.919466842543 1.036608540204553 0.8636482732940803 0.8500957207611685 1.002851940813625 1.0012686515642797 0.992721358111635 0.85786814506811 0.9971203967332859 1.0350758253464243 0.9264927052547616 1.0 12.175836273170223 -8.504072628892281 24.0210710974528 1.0165390916440673 0.9421700808204343 0.05544439538962431 0.06682723016211113 495.62196111448634 633059.2677312745 0.01006736857999515 0.0120640463428533 3.1327617755817172e-09 8.504072628892281 -0.07436901082363301 EKLEATINELV ddPTM_A549_PD325901_60min_R1 1 EKLEATINELV 11 1 P10599;P10599-2 P10599 TXN Thioredoxin 0 103.7 0.00056975 22845000.0 6015.0 5859.7 5288.4 5823.3 6782.4 6230.2 5757.4 5503.1 6366.0 6466.7 6420.6 False True 6625.638371991038 6353.517483618936 5647.302625732601 6182.992015326138 6306.02762200977 6179.463316816225 5976.501007570168 5393.336353401566 6098.459158361333 6058.391458386075 5630.906903536809 1.1766556409997528 1.1283293424063272 1.0029117373944672 1.0980455051463487 1.1198955567972386 1.0974188390390303 1.0613745014708535 0.9578095404159456 1.0830332063438752 1.0759175319664334 1.0 12.459151583498036 -7.893368318897736 4.196069056084513 1.0332674525964338 1.1007425972243838 0.3241532371391389 0.050179809512285484 0.23276696096924973 7.474762801553028 0.008359769826194095 0.011700605250663128 1.278296739259159e-08 7.893368318897736 0.06747514462795001 EKLEQKS(ph)PDSK ddPTM_A549_MK2206_60min_R1 1 EKLEQKSPDSK 11 2 P17041 P17041 ZNF32 Zinc finger protein 32 1 EKLEQKS(0.97)PDS(0.03)K 54.598 0.0038266 9550300.0 2638.1 2860.6 2865.7 2507.7 3925.1 2661.6 2840.2 2229.4 4676.0 4142.5 4148.0 True False 3083.3467846474555 3006.19232138951 3272.099351207952 3122.086612574929 3347.7229895485284 2943.248745372909 3356.227575855716 2545.424277251158 3616.893466037613 3206.7063729088 3117.9371210239406 0.9889060186162043 0.9641606628687454 1.0494436623319023 1.0013308451677903 1.07369804444585 0.943973092185495 1.0764256768441567 0.8163808885328747 1.1600277124414278 1.0284705074025697 1.0 11.606376118373971 EKLEQKS(ph)PDSK ddPTM_A549_PD325901_60min_R1 1 EKLEQKSPDSK 11 2 P17041 P17041 ZNF32 Zinc finger protein 32 1 EKLEQKS(0.997)PDS(0.003)K 54.598 0.0061158 9515400.0 1937.4 1936.6 2256.2 2027.0 2670.7 2824.7 2816.6 2234.3 2521.7 2419.4 2481.0 True False 2134.0834217615015 2099.8040784982895 2409.319299632763 2152.2031863489906 2483.1192454148227 2801.6965797262997 2923.787254302659 2189.7351337255586 2415.721718447968 2266.6386711026144 2175.8527283548015 0.9808032473664325 0.9650488064447204 1.107298884816754 0.9891309086788733 1.1412165966270844 1.287631530946816 1.3437431753542362 1.0063802136927043 1.1102413720226991 1.0417243049424847 1.0 11.087365196368706 -5.758476214339067 24.61087740106897 1.0896441866405044 0.972925973184184 0.16821381208334552 0.11063997418807388 99.72006589223123 828178.6182673534 0.016748914520122362 0.059655599613778185 1.7439088661375737e-06 5.758476214339067 -0.1167182134563205 EKLLS(ph)GSESSSK ddPTM_A549_PD325901_60min_R1 1 EKLLSGSESSSK 12 1 G3XAI9;Q5BKY9-2;Q5BKY9 G3XAI9 FAM133B Protein FAM133B 1 EKLLS(0.944)GS(0.052)ES(0.003)S(0.001)SK 59.513000000000005 0.0029675 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EKLQEEGGGS(ph)DEEET(ph)GSPSEDGMQSAR ddPTM_A549_MK2206_60min_R1 1 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 2 EKLQEEGGGS(0.96)DEEET(0.635)GS(0.33)PS(0.075)EDGMQSAR 116.22 1.1790000000000001e-17 33530000.0 636.46 996.97 1357.9 1201.7 1629.4 1366.9 991.52 805.84 1856.4 1635.3 1300.5 True False 743.8788880469722 1047.711514596833 1550.4706385892734 1496.1165539463632 1389.7174184531275 1511.5444507252146 1171.6663495572357 920.0702877814977 1435.9283640616402 1265.8845942348257 977.549958025948 0.7609625287582763 1.071772860297154 1.58607815985208 1.5304757998942602 1.4216331421664683 1.5462580079054051 1.1985743950347907 0.9412002734258983 1.4689053508439975 1.2949564202234094 1.0 9.933026623503736 EKLQEEGGGS(ph)DEEETGS(ph)PSEDGMQSAR ddPTM_A549_MK2206_60min_R1 2 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 2 EKLQEEGGGS(0.996)DEEET(0.146)GS(0.524)PS(0.334)EDGMQSAR;EKLQEEGGGS(0.997)DEEET(0.004)GS(0.651)PS(0.347)EDGMQSAR 156.39 2.3538e-41 51225000.0 2653.8 3062.3 2824.7 2084.4 3921.1 2800.0 2418.0 3108.2 5225.700000000001 4648.5 4099.4 True False 3101.6965608193054 3218.157989859153 3225.284934695573 2595.078093572271 3344.311384249762 3096.294141510425 2857.319300901036 3548.7968684632815 4042.0872937281383 3598.400621476539 3081.405842315704 1.0065848899956498 1.0443797910893422 1.0466926785183683 0.8421734190073602 1.0853199985291395 1.0048316580017687 0.9272778228893521 1.1516810994933173 1.3117672583792057 1.167778866406091 1.0 11.58937299240025 -8.27908968080077 23.3055380009407 1.1516713653241344 0.9959684013862176 0.4301602167409505 0.09063274473727212 349.20983831225595 461096.98957382864 0.020354868510493274 0.024643042744707667 5.2590865626245285e-09 8.27908968080077 -0.15570296393791683 EKLQEEGGGS(ph)DEEETGS(ph)PSEDGMQSAR ddPTM_A549_PD325901_60min_R1 1 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 2 EKLQEEGGGS(1)DEEET(0.004)GS(0.498)PS(0.498)EDGMQSAR 153.89 8.979899999999999e-35 54564000.0 4355.4 4204.1 5359.8 4663.1 5316.7 5094.7 4475.3 5083.1 4942.0 4763.2 5816.3 True False 4797.557001723983 4558.394261290232 5723.5482590956835 4951.129096331514 4943.273333619271 5053.210452342403 4645.609990478125 4981.713582885192 4734.304926267938 4462.450739107205 5100.931972563496 0.9405255799388655 0.8936394929021942 1.1220593197245265 0.9706322536670299 0.9690921894680763 0.9906445487848546 0.9107374917888688 0.9766281161325918 0.9281254781934862 0.8748304747268724 1.0 12.316545145346028 EKLQEEGGGS(ph)DEEETGSPSEDGMQSAR ddPTM_A549_MK2206_60min_R1 7 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(0.989)DEEET(0.01)GSPSEDGMQSAR;EKLQEEGGGS(0.803)DEEET(0.193)GSPS(0.004)EDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(0.997)DEEET(0.003)GSPSEDGMQSAR;EKLQEEGGGS(0.856)DEEET(0.144)GSPSEDGMQSAR;EKLQEEGGGS(0.957)DEEET(0.02)GS(0.02)PS(0.002)EDGMQSAR 216.86 5.354199999999999e-82 1561474200.0 18773.7 19960.819999999996 20603.49 17996.050000000003 26394.83 20359.61 18514.06 18542.91 28572.2 29115.899999999998 30081.08 True False 21942.241587102817 20976.740478444422 23525.37469435724 22405.083057873384 22512.185472019868 22514.05041658466 21877.82505212565 21171.424277780217 22100.642320427716 22538.597968129237 22611.11764042691 0.97041826662614 0.9277179842247006 1.04043396122515 0.9908879080711538 0.995624622808111 0.9957071019050956 0.9675693789240125 0.9363280760579197 0.9774237024406744 0.9967927426918511 1.0 14.464744684086963 -8.4088111806784 0.002157283311689836 1.9661658533016353 3.6466649747791203e-06 0.026589802656713624 0.029455772915504615 65506.89294583891 108.53527580880164 49407.82650260162 49509.161272641824 3.9011155961062236e-09 8.4088111806784 -1.9661622066366604 EKLQEEGGGS(ph)DEEETGSPSEDGMQSAR ddPTM_A549_PD325901_60min_R1 8 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 EKLQEEGGGS(0.972)DEEET(0.01)GS(0.013)PS(0.005)EDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(0.997)DEEET(0.003)GSPSEDGMQSAR;EKLQEEGGGS(0.999)DEEET(0.001)GSPSEDGMQSAR;EKLQEEGGGS(0.981)DEEET(0.011)GS(0.004)PS(0.004)EDGMQSAR;EKLQEEGGGS(0.999)DEEET(0.001)GSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR 306.65 6.366999999999998e-190 2079565200.0 35859.06999999999 37685.35 37902.229999999996 37332.729999999996 45951.96 41058.149999999994 43097.53 43402.65 44484.32 45112.46 47174.73 True False 39499.45638834786 40861.22670124735 40474.50325242436 39638.6879433185 42724.452855255964 40723.78603918623 44737.63008802332 42536.95009702977 42614.79872878983 42264.051576659425 41372.53727525232 0.9547264680809202 0.987641304892586 0.9782939582154867 0.958091781502341 1.0326766417783209 0.9843192784684697 1.0813363896534305 1.0281445833024594 1.0300262332298529 1.0215484560561476 1.0 15.33638581674968 -6.761665115909209 24.99999915940392 1.019494291849778 0.9715854111640194 0.5377754187029622 0.024447714934078536 4.24764350767186 470508.7821051607 0.003621557457507828 0.007161741913855833 1.7311507334806762e-07 6.761665115909209 -0.047908880685758604 EKLQEEGGGSDEEET(ph)GS(ph)PSEDGMQSAR ddPTM_A549_PD325901_60min_R1 1 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 2 EKLQEEGGGS(0.089)DEEET(0.91)GS(0.922)PS(0.079)EDGMQSAR 172.64 1.0597000000000001e-48 51899000.0 4817.7 4398.2 5206.7 4937.6 6710.2 5862.9 4767.9 5406.4 5759.6 6302.6 6939.4 True False 5306.789357396713 4768.851749484241 5560.057972430594 5242.584337896784 6238.898700933291 5815.154486238302 4949.345043594991 5298.565110761251 5517.5440415485255 5904.652760391555 6085.897792480976 0.87198134742801 0.7835905090907174 0.9135970011359625 0.86143154496842 1.0251402362756314 0.9555130047407018 0.8132481373101308 0.8706299861472434 0.9066113545918169 0.9702188504852404 1.0 12.57125438987197 -14.99999999999996 0.15696238582107652 1.423900189678453 0.8572430976343319 0.25859188608103056 0.06233094554776863 54.25591082725785 0.5527668116944324 7.063884097427396 0.10863152226404277 1.0000000000000941e-15 14.99999999999996 -0.5666570920441212 EKLQSFDS(ph)PER ddPTM_A549_MK2206_60min_R1 2 EKLQSFDSPER 11 1 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 EKLQSFDS(1)PER;EKLQSFDS(1)PER 188.39 2.1084e-19 102870000.0 16084.1 15548.1 15247.900000000001 14669.900000000001 20799.0 16438.3 15538.8 14592.8 22534.0 22177.0 22526.0 True False 18798.70286150947 16339.431878695452 17410.281500953948 18264.026158556833 17739.494652268702 18177.78999513958 18361.99882251489 16661.374088575707 17430.084979403677 17167.200297404575 16932.1725140273 1.1102357270418701 0.9649932319765346 1.0282367183851076 1.0786581664831356 1.0476797727859541 1.0735651305277194 1.0844443503810905 0.9840068706347486 1.0294062953211636 1.013880545050115 1.0 14.047479472341795 -8.265125601625408 24.992614763177944 1.0120333486553434 1.052175857926823 0.2797207088951764 0.03692823863248561 366.9962322995395 2488240.3268032167 0.005944067884345304 0.0073257600232325285 5.430932416337414e-09 8.265125601625408 0.040142509271479554 EKLQSFDS(ph)PER ddPTM_A549_PD325901_60min_R1 4 EKLQSFDSPER 11 1 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 EKLQS(0.002)FDS(0.998)PER;EKLQSFDS(1)PER;EKLQSFDS(1)PER;EKLQSFDS(1)PER 198.23 5.269000000000001e-24 212715000.0 21779.600000000002 21907.7 21600.1 21602.0 25502.8 21994.7 22799.0 23928.100000000002 24930.800000000003 23752.8 25604.9 True False 23990.64895870589 23753.93876407985 23066.012677953022 22936.306478298444 23711.571307883758 21815.582455519543 23666.628421091515 23450.8352742687 23883.045175192372 22253.04415432178 22455.659622834275 1.068356457198467 1.0578152306835558 1.027180366347293 1.0214042634924614 1.055928514510097 0.9714959534449007 1.0539271087376945 1.0443173644484025 1.0635646236330838 0.9909770867605036 1.0 14.4547914806745 -5.6679238257273115 4.135888039583998 1.0302241738686675 1.065929447078922 0.20119058331697515 0.027864657511994653 0.29056788662663424 8.905845500958133 0.0039868865969904296 0.017230457817757908 2.1482072317920843e-06 5.6679238257273115 0.03570527321025452 EKLQSFDS(ph)PERK ddPTM_A549_PD325901_60min_R1 1 EKLQSFDSPERK 12 2 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 EKLQS(0.016)FDS(0.984)PERK 51.147 0.0090519 5702700.0 2289.0 2035.3 2305.2 2316.9 2246.1 2343.1 2574.8 2570.0 2580.4 2329.2 2612.9 True False 2521.377594927262 2206.82187388597 2461.6447342936995 2460.0096509383225 2088.341684624343 2324.0185704523283 2672.785422984622 2518.739333874003 2471.9547615827155 2182.133914496242 2291.529864537791 1.1003031790885396 0.9630343064855029 1.0742363747418238 1.0735228412283924 0.9113307737953344 1.0141777362003048 1.1663759937615874 1.0991518691736712 1.0787355643219236 0.9522607356183793 1.0 11.162095372530024 EKLT(ph)RPAASPAVGEK ddPTM_A549_MK2206_60min_R1 1 EKLTRPAASPAVGEK 15 2 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 EKLT(0.604)RPAAS(0.396)PAVGEK 68.653 0.00087606 7852200.0 1338.1 1662.7 1760.4 1859.3 2249.3 1637.1 1788.6 1579.3 2425.1 2396.9 2459.8 True False 1563.9385665959437 1747.324328034096 2010.0511909364136 2314.8285834671497 1918.4309496296933 1810.3368353809697 2113.5654679865984 1803.170611403406 1875.818722088926 1855.4386252806535 1848.9637729736469 0.8458459757060013 0.9450289689688801 1.087123079595926 1.251959944971914 1.0375708695169965 0.9791088726792335 1.1431081013487887 0.9752330671700544 1.0145243241148467 1.0035018816494135 1.0 10.852501242739363 EKLTRPAAS(ph)PAVGEK ddPTM_A549_MK2206_60min_R1 1 EKLTRPAASPAVGEK 15 2 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 EKLT(0.127)RPAAS(0.873)PAVGEK 77.023 0.00011998 7435800.0 914.04 1338.8 1475.0 1518.2 2118.8 1492.8 1510.1 1292.2 2163.7 2271.9 2255.2 True False 1068.30760586754 1406.9392015228532 1684.1771794087765 1890.1590681545888 1807.1273267573893 1650.767105159557 1784.4656229489879 1475.37330719653 1673.6254047189022 1758.6762120969236 1695.1715996463815 0.630206172690949 0.8299686013005086 0.9935142729857565 1.1150252095710442 1.066043890267134 0.9738053100369972 1.0526755069051612 0.870338617933605 0.9872896673516864 1.0374620554425222 1.0 10.727215607243805 -5.4656836723437205 2.3416016835083124 1.0012656241361169 0.6124535728056381 0.7872517419110898 0.06017708500744959 0.1298553488070873 1.1173542220680341 0.008312602622844726 0.08500600213206345 3.422286212768251e-06 5.4656836723437205 -0.3888120513304788 EKLTRPAAS(ph)PAVGEK ddPTM_A549_PD325901_60min_R1 2 EKLTRPAASPAVGEK 15 2 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 EKLT(0.012)RPAAS(0.988)PAVGEK;EKLT(0.028)RPAAS(0.972)PAVGEK 82.765 5.4384e-05 29880000.0 4843.5 4327.6 4867.3 5023.6 5676.2 5745.4 5226.4 5961.8 5993.6 5494.1 6155.4 True False 5335.208554403752 4692.302039713524 5197.624247452594 5333.896362576611 5277.5232938269455 5698.611367281298 5425.293511995818 5842.88722205838 5741.709835305444 5147.201588371027 5398.324822295503 0.9883081752266786 0.8692144682242815 0.962821693497583 0.9880651013342515 0.9776224046449303 1.0556258755948862 1.0049957515688817 1.0823519173812588 1.0636095500574057 0.9534812664685688 1.0 12.398296072399784 -6.646074129812623 1.2159968585532954 1.0345043716121007 0.9299785381014193 0.3894816511027748 0.04414620497889121 0.27562439034136094 0.790148965422042 0.006008001044125398 0.019149610783964783 2.2590501395867197e-07 6.646074129812623 -0.10452583351068145 EKNGS(ph)EEDDDEKPGKR ddPTM_A549_MK2206_60min_R1 2 EKNGSEEDDDEKPGKR 16 3 Q6ZU65-2;Q6ZU65;H7C4P8 Q6ZU65-2 UBN2 Ubinuclein-2 1 EKNGS(1)EEDDDEKPGKR;EKNGS(1)EEDDDEKPGKR 89.02799999999999 2.0694e-06 19148500.0 2711.41 2506.6000000000004 2650.4 2198.72 4115.7 2888.99 2312.6 2793.63 4341.9 3663.0 4360.2 True False 3169.029720390036 2634.1752334457624 3026.2665737661173 2737.4064987042925 3510.2859820348203 3194.7010042436414 2732.7694852207337 3189.6356076330626 3358.466582589545 2835.5257559360143 3277.442004601876 0.9669216773143148 0.8037290148070053 0.923362356837106 0.8352265257053164 1.0710444233966632 0.974754396800292 0.8338116986917345 0.9732088632398304 1.0247218952689023 0.865164281154216 1.0 11.678354536378821 -7.409724617352071 0.4458698173085339 1.0141020095959172 0.874558974750409 0.0 0.0864446771960678 1.1881920369921024 0.4480913602247787 0.022055074090843604 0.0658856658221063 3.8929191362931326e-08 7.409724617352071 -0.13954303484550823 EKPCVS(ph)PTVGEK ddPTM_A549_MK2206_60min_R1 1 EKPCVSPTVGEK 12 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 EKPCVS(0.992)PT(0.008)VGEK 51.773999999999994 0.015324 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EKPCVS(ph)PTVGEK ddPTM_A549_PD325901_60min_R1 2 EKPCVSPTVGEK 12 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 EKPCVS(0.834)PT(0.166)VGEK;EKPCVS(0.846)PT(0.154)VGEK 111.22 1.9435e-05 136184000.0 21889.2 22663.5 25074.6 24372.6 28458.0 28111.0 23773.9 26317.0 29406.0 28380.0 30280.0 True False 24111.375470022645 24573.432682560164 26776.313141818842 25878.04014780929 26459.208254770285 27882.07333617233 24678.628774077246 25792.086789712896 28170.168082119577 26588.081956638904 26555.75196073493 0.9079530305025247 0.9253525458022878 1.0083055897422912 0.9744796602284996 0.9963644898435791 1.0499447870050331 0.9293138755990348 0.9712429468330935 1.0607934628916442 1.0012174385403123 1.0 14.696736761349369 -2.6399585543857396 0.3763583691825048 1.0221546780438422 4.8772975437778045e-12 0.35381065241994925 0.037554904063958935 24.406888315829452 0.46663870587148654 0.009876139598717684 17.1194604323493 0.0022910862854044396 2.6399585543857396 -1.022154678038965 EKPDQDAEGK ddPTM_A549_PD325901_60min_R1 1 EKPDQDAEGK 10 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 71.03 0.012562 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EKPDQDAEGKAEEK ddPTM_A549_PD325901_60min_R1 1 EKPDQDAEGKAEEK 14 2 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 53.403 0.0066546999999999995 8045900.0 2775.1 3315.7 3067.3 3374.1 3330.7 3010.4 2690.9 2781.7 3464.7 2958.4 3208.7 False True 3056.8261090793553 3595.12567545016 3275.465423173288 3582.5104938629156 3096.763122291215 2985.8843004949376 2793.303672016981 2726.2168112985664 3319.0907078188047 2771.6061191162985 2814.0502416251693 1.0862727551424165 1.2775627180607494 1.1639683523495452 1.2730797911390328 1.1004647594716623 1.0610628965780409 0.992627505614041 0.9687875400988302 1.179471019643901 0.9849170701073345 1.0 11.458432371124387 -6.9204481954450925 6.387894252719352 1.0683802750249827 1.2026707245449493 0.47950104288708595 0.07708401117363456 0.1851288822317031 11.934490732591296 0.01245463558421102 0.023694929619011935 1.2010243279318572e-07 6.9204481954450925 0.1342904495199666 EKPDS(ph)DDDLDIASLVTAK ddPTM_A549_MK2206_60min_R1 2 EKPDSDDDLDIASLVTAK 18 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK 242.64 3.4675999999999995e-75 25128000.0 10814.4 12330.6 12841.1 10381.6 16250.199999999999 11940.8 11421.099999999999 12761.7 18424.1 16846.5 18849.8 True False 12639.606333304817 12958.174871749094 14662.16107017359 12925.092466047732 13859.81710650977 13204.367530338459 13496.166032887018 14570.710056067137 14251.070767242012 13040.863949597608 14168.874431985801 0.8920684839136757 0.914552170954131 1.0348148076656116 0.9122173061869848 0.9781875880854485 0.9319277684139823 0.9525221003031713 1.0283604478259898 1.0058011901828035 0.920388137547345 1.0 13.790437535413743 -8.1797595241262 6.705852971635473 1.0046970605098422 0.9466502227577742 0.14705577103485268 0.0446099947888653 0.19960311784323623 13.893535127577621 0.005570713144737845 0.007203183347603363 6.610593859515675e-09 8.1797595241262 -0.05804683775206798 EKPDS(ph)DDDLDIASLVTAK ddPTM_A549_PD325901_60min_R1 2 EKPDSDDDLDIASLVTAK 18 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK 266.63 6.684299999999998e-101 37395000.0 25637.0 26583.0 25946.0 26346.0 31346.0 28164.0 28641.0 29095.0 29170.0 29153.0 31541.0 True False 28239.649367038113 28823.242703046602 27706.851585972712 27973.33258389272 29144.365097829435 27934.64172174445 29730.94892795657 28514.677400414064 27944.08634140749 27312.274604717903 27661.65695487255 1.02089507555923 1.0419926308127194 1.00163383672836 1.0112674244181628 1.05360156643457 1.0098687062498553 1.0748072314127777 1.030837648190531 1.0102101398696288 0.9873694352176866 1.0 14.75559995718682 -8.857827084972826 3.639574537168192 1.0043300738708794 1.0309386012087414 0.31107396301306833 0.020584762362743047 0.22701296038563534 5.587240651467476 0.003494832394914754 0.0036964024931130848 1.387308077806031e-09 8.857827084972826 0.02660852733786201 EKPELSEPSHLNGPS(ph)SDPEAAFLSR ddPTM_A549_MK2206_60min_R1 1 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.499)S(0.499)DPEAAFLS(0.001)R 94.891 5.5708e-09 10174000.0 966.19 1678.6 1382.8 1412.6 1373.0 1290.2 1055.7 1288.9 2323.1 1970.0 2797.1 True False 1129.2592509224535 1764.0335701197055 1578.9018330077665 1758.6870634140246 1171.0335188021015 1426.7281076345528 1247.5070247978585 1471.605522090704 1796.921559228396 1524.97563177558 2102.502873967228 0.5371023578158759 0.8390160089489617 0.7509629844303257 0.8364730841463941 0.5569711857717796 0.6785855683243129 0.593343790509988 0.6999303260470321 0.8546583129457377 0.7253144101049871 1.0 11.037892057202166 -9.132838816208672 1.2825237209672955 0.9580400570756847 0.6902300692764466 0.20614496828017892 0.12053925994764915 0.20177921951035074 0.6846655989196933 0.02243754988531292 0.02046054586546369 7.364803836620959e-10 9.132838816208672 -0.26780998779923815 EKPELSEPSHLNGPS(ph)SDPEAAFLSR ddPTM_A549_PD325901_60min_R1 1 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.843)S(0.157)DPEAAFLSR 133.28 4.3015e-24 18002000.0 2135.6 1975.0 1812.2 2643.3 2705.0 2159.1 2313.5 2798.0 2325.5 2587.3 2843.1 True False 2352.4045398543717 2141.4401812631027 1935.1867896438678 2806.5706376301387 2515.0101317433996 2141.517005447324 2401.5415084957767 2742.191695011464 2227.7673221440905 2423.9374364486202 2493.416723895822 0.9434462026784167 0.8588376586795423 0.7761184767463372 1.1255922889796903 1.0086601680499836 0.8588684694876536 0.9631528839445275 1.099772720994245 0.893459685576878 0.9721349075822976 1.0 11.283908304778098 -6.2318570987162065 24.997298791323438 0.9675155278193254 0.8594044919238119 0.30231958707545714 0.08342503096575989 799.9081418240693 675928.9944591388 0.011911517574005513 0.031509883715562945 5.863310605361266e-07 6.2318570987162065 -0.10811103589551352 EKPELSEPSHLNGPSS(ph)DPEAAFLSR ddPTM_A549_MK2206_60min_R1 1 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.247)S(0.753)DPEAAFLSR 105.51 2.7812e-12 11279000.0 1206.5 1582.9 1569.9 876.74 1662.6 1050.3 1043.3 1297.0 2357.3 2113.3 2615.0 True False 1410.1277039070358 1663.462848887455 1792.5354264093814 1091.541339358354 1418.033742432902 1161.4420488672847 1232.8541053060585 1480.8537218959136 1823.3753138345746 1635.9040622494076 1965.6233296715534 0.7173946720212472 0.8462775262061079 0.9119424863098801 0.5553156206895171 0.7214168254046155 0.5908772201342137 0.627207708972432 0.7533761425915501 0.9276321085074078 0.8322571458910999 1.0 10.940771170695049 -8.780660983367842 2.9159902888477207 0.9699663334688656 0.7112198746929828 0.41063714544222696 0.10646135839854283 0.13963260758499335 2.3487592511873507 0.018745306236593283 0.020242256308704357 1.657062986359897e-09 8.780660983367842 -0.25874645877588287 EKPELSEPSHLNGPSS(ph)DPEAAFLSR ddPTM_A549_PD325901_60min_R1 1 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.212)S(0.788)DPEAAFLSR 156.67 1.1377999999999999e-40 17009000.0 1657.4 1957.6 1751.1 2409.7 3274.7 3105.8 2610.9 2832.1 2671.6 3045.8 3433.7 True False 1825.6580278866072 2122.573822197797 1869.9401762197194 2558.5416961742303 3044.6963691017045 3080.5073945247095 2710.2592282393016 2775.611543760531 2559.3219427392582 2853.4876682005215 3011.3766680176855 0.6062536272117671 0.7048516529800422 0.6209585788717207 0.8496252638692505 1.0110646075723075 1.0229565192694845 0.9000067168692644 0.9217085239581294 0.8498843634941212 0.9475691628038354 1.0 11.55620745871405 -6.397731020592766 3.75634115982914 0.9366746537128274 0.6503690376438036 0.8550322485066237 0.054792339578670274 0.08257119426658234 2.061462116516159 0.009725196150171847 0.02379322743063972 4.0019253145496613e-07 6.397731020592766 -0.2863056160690238 EKPHAGVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EKPHAGVSPR 10 1 A0A0C4DH79;A0A087WWP8;Q5VWQ0-4;Q5VWQ0 A0A0C4DH79 RSBN1 Round spermatid basic protein 1 1 EKPHAGVS(1)PR;EKPHAGVS(1)PR 92.935 0.00016999999999999999 65841000.0 11643.0 12797.3 12061.0 11070.5 15230.3 12871.1 12264.7 11643.5 16890.9 17579.4 18372.0 True False 13608.053755979803 13448.627908312224 13771.431159897795 13782.772996973632 12989.943045456406 14233.111258855291 14493.03723315175 13294.001781723262 13065.138119224717 13608.201330576456 13809.725358594947 0.9853964074318373 0.9738519455741398 0.9972270122900512 0.9980483057467511 0.9406373195808473 1.0306585315251644 1.049480482544971 0.9626550446529548 0.9460824006245127 0.9854070937121812 1.0 13.75339700778169 -4.833247260352879 16.57844382782498 0.9821986990545463 2.8446851523291 0.0 0.03185591438244391 3237.4641023386143 302720.37957265746 0.004680803290867149 13669.17801536689 1.4680902001188845e-05 4.833247260352879 1.862486453274554 EKPHAGVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EKPHAGVSPR 10 1 A0A0C4DH79;A0A087WWP8;Q5VWQ0-4;Q5VWQ0 A0A0C4DH79 RSBN1 Round spermatid basic protein 1 1 EKPHAGVS(1)PR;EKPHAGVS(1)PR 107.61 7.3001e-05 135280000.0 10209.4 11312.400000000001 10639.2 10647.1 12635.5 12125.4 11759.5 11295.599999999999 12608.7 12933.1 12414.599999999999 True False 11245.850772236958 12265.735648871252 11361.24009070689 11304.747185681483 11748.026070108592 12026.654762563561 12207.014207545319 11070.300396773222 12078.800186935367 12116.501858823342 10887.682902633418 1.0328966110426405 1.1265698825509074 1.0434947630555012 1.0383060644563031 1.0790198589699083 1.104611042598849 1.1211764997851648 1.016772852017543 1.1094004385463734 1.112863220501463 1.0 13.410409334470561 -10.956167627604405 1.1572331807710452 0.9989860314036417 1.0781052312250257 0.0 0.049027238552737704 0.4108467440983116 0.9569905147554857 0.02654589423572114 0.005847557568021343 1.10619673526594e-11 10.956167627604405 0.07911919982138393 EKPKEVAENQQNQSS(ph)DPEEEK ddPTM_A549_MK2206_60min_R1 1 EKPKEVAENQQNQSSDPEEEK 21 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EKPKEVAENQQNQS(0.374)S(0.626)DPEEEK 118.67 2.2021999999999998e-15 6066400.0 1039.4 1200.6 949.17 1236.4 1342.1 920.97 1007.5 928.92 1762.0 1997.5 1540.6 True False 1214.8253091098009 1261.7054118227804 1083.776578562324 1539.3180555041054 1144.6788678691198 1018.426434109591 1190.5497087087647 1060.5972546981893 1362.909813335817 1546.2633626759994 1158.0265016030576 1.0490479340741483 1.0895306886985747 0.9358823628492532 1.329259782373914 0.9884738097828845 0.8794500235528133 1.0280850283311178 0.9158661336592929 1.1769245448607084 1.3352573197033963 1.0 10.177452554650559 -3.844672328945834 15.472557011535084 1.0587937783339205 1.0500575946976407 0.0 0.1482083637406286 0.0 0.0 0.016211960712500372 0.0 0.00014299724522119406 3.844672328945834 -0.008736183636279815 EKPKEVAENQQNQSS(ph)DPEEEK ddPTM_A549_PD325901_60min_R1 1 EKPKEVAENQQNQSSDPEEEK 21 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EKPKEVAENQQNQS(0.159)S(0.841)DPEEEK 115.88 2.9279e-15 10699000.0 1350.8 1014.5 1171.1 1168.8 1557.9 1197.8 1201.8 1424.1 1312.7 1573.1 1261.0 True False 1487.9322215935986 1099.99547538806 1250.577888396386 1240.9941214626056 1448.4784784632318 1188.0455139293247 1247.535156650194 1395.695208315162 1257.5317840372159 1473.7741975330746 1105.904994137607 1.3454430800847403 0.9946563956389805 1.130818555866633 1.1221525610618497 1.3097675533988942 1.0742744812864973 1.1280672058299468 1.2620389777727115 1.1371065242524279 1.332640873624352 1.0 10.111011736804494 -10.23825484970421 0.7701051809904486 1.0035000204453084 1.1625879646247985 0.0 0.138229635803244 0.6116762433563756 0.6934448269192767 0.052252556514852805 0.018618378220828083 5.7775691256889425e-11 10.23825484970421 0.15908794417949013 EKPLALYMFSSNDK ddPTM_A549_MK2206_60min_R1 2 EKPLALYMFSSNDK 14 1 P30838;C9JMC5;A8MYB8;E9PNN6;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 105.46 2.1527e-05 7045200.0 2165.66 2507.86 2778.1000000000004 2623.7 3189.3999999999996 2707.6 2781.3 2353.2 4137.3 3576.1 4233.6 False True 2531.1704626964884 2635.4993620638666 3172.0763539766276 3266.5066177823696 2720.2434849726305 2994.1164348405814 3286.6262082696667 2686.7733063727546 3200.208155910486 2768.2565262906865 3182.280278584125 0.7953952012745616 0.8281795226523747 0.9967935179449255 1.026467291320964 0.8548095223664378 0.9408713792402779 1.0327896729863053 0.8442918508636726 1.0056336575527336 0.8698971441705795 1.0 11.63584519095206 -4.012005152114789 0.5937652151886781 0.986932513201612 5.223236676360524e-30 0.20328522742738409 0.07614821223457442 8.52271640594999 0.667768854018968 0.011429407588241212 8.125704447220706 9.727356839673688e-05 4.012005152114789 -0.986932513201612 EKPLALYMFSSNDK ddPTM_A549_PD325901_60min_R1 2 EKPLALYMFSSNDK 14 1 P30838;C9JMC5;A8MYB8;E9PNN6;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 138.39 2.1008e-09 12431300.0 4827.799999999999 5065.4 6204.700000000001 5633.8 6497.5 6675.6 6483.2 6600.6 7217.9 6702.700000000001 6495.3 False True 5317.914701961486 5492.279035022846 6625.788253892121 5981.7870307118665 6041.138015158132 6621.236126888126 6729.921723743165 6468.945854929469 6914.55676392338 6279.490378110062 5696.419277099131 0.9335539473614033 0.9641634100044261 1.163149679050006 1.0500959883272596 1.0605149869225472 1.1623505582720997 1.1814301926122157 1.1356161722392988 1.2138426663432993 1.1023574762754922 1.0 12.475839622456938 -5.687669969401493 6.390169340635279 1.1115644329936967 0.9437266215671876 0.5374133698535106 0.060604642831459936 0.16557682645944652 11.114982763147834 0.011397188083902292 0.04499070821267488 2.052721497648632e-06 5.687669969401493 -0.1678378114265091 EKPNS(ph)GGTKSDSASDSQEIK ddPTM_A549_MK2206_60min_R1 1 EKPNSGGTKSDSASDSQEIK 20 2 O60551 O60551 NMT2 Glycylpeptide N-tetradecanoyltransferase 2 1 EKPNS(0.333)GGT(0.333)KS(0.333)DSASDSQEIK 88.01700000000001 9.957399999999999e-07 5277400.0 1235.2 1286.2 1451.5 1017.6 1303.0 1197.8 965.81 1019.7 1626.7 1952.8 1732.3 True False 1443.6715622594043 1351.6620861956192 1657.344526041924 1266.9120456818 1111.3304260736627 1324.5504009647098 1141.2851753528653 1164.2455977002796 1258.2550473061137 1511.6611237214984 1302.1221009522114 1.1087067497001095 1.0380455759157918 1.2728027001691675 0.9729594826440139 0.8534763562195686 1.0172244215777437 0.8764809187389341 0.894113998102708 0.9663111058371417 1.160921178295074 1.0 10.346649022089537 -6.407002264707483 10.091897128556747 0.9617178517891215 1.1294681902363592 0.3978634555083317 0.09397266276995692 0.24057307510675552 19.64432348747928 0.010002046145369713 0.023257812850644162 3.9173983430391555e-07 6.407002264707483 0.16775033844723775 EKPPSGRQT(ph)PQPLR ddPTM_A549_MK2206_60min_R1 2 EKPPSGRQTPQPLR 14 2 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 EKPPS(0.011)GRQT(0.989)PQPLR;EKPPS(0.014)GRQT(0.986)PQPLR 86.005 4.6954e-05 51038000.0 4165.8 4410.2 3958.0 4051.7 5042.1 3584.7 3866.6 3626.1000000000004 5542.4 5585.3 6452.4 True False 4868.885195968448 4634.660342512762 4519.303915999955 5044.366681887725 4300.413769229483 3964.0305746687204 4569.111169918917 4140.110779465513 4287.055249394114 4323.576850840684 4850.091002819401 1.0038750186621492 0.9555821405863504 0.931797756655049 1.0400560894538657 0.8866666144469483 0.8173105561038739 0.9420671008570461 0.8536150717705769 0.8839123321401621 0.891442417952024 1.0 12.243796101670007 -6.779767757686657 24.99982879341316 0.9235075562972321 0.9772366703486345 0.2908980512874648 0.05518648732230547 388.80793768280887 530331.6694648763 0.00966304900012623 0.018286402210875297 1.6604746216311627e-07 6.779767757686657 0.05372911405140235 EKPPSGRQT(ph)PQPLR ddPTM_A549_PD325901_60min_R1 1 EKPPSGRQTPQPLR 14 2 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 EKPPS(0.002)GRQT(0.998)PQPLR 85.63600000000001 5.5641000000000005e-05 44088000.0 2982.2 2993.4 3056.7 3797.3 3735.5 3328.1 3676.2 3622.8 3822.2 3644.8 4430.9 True False 3284.9507486203943 3245.664323338214 3264.1460434303085 4031.8505967059823 3473.1313667754025 3300.997057028039 3816.099802693827 3550.5404119683812 3661.5662260585436 3414.6667059745405 3885.927389789314 0.8453453755342806 0.8352354528976895 0.83999151708475 1.037551707039122 0.8937715552538175 0.849474713732881 0.9820306505780405 0.9136919082167625 0.9422631610872856 0.8787263279666365 1.0 11.924043228465026 -2.000000000044428 0.11500850187778841 1.0292576474902948 0.44792834851014657 0.11889742882860488 0.06340043605143532 62.87804376318285 0.4836266519868225 0.21904586240136123 5.861385398264613 0.009999999998977008 2.000000000044428 -0.5813292989801482 EKPQQHNFTHR ddPTM_A549_MK2206_60min_R1 2 EKPQQHNFTHR 11 1 F8WCR3;F8WDI9;E9PF19;Q96E41;Q9Y4P3 F8WCR3 TBL2 Transducin beta-like protein 2 0 ; 68.44 0.0093264 14902000.0 609.34 627.85 605.7 612.98 1055.73 637.13 540.64 703.88 1164.56 1176.31 924.02 False True 712.1816950673136 659.8048832358262 691.5973678426413 763.1601275177176 900.4335155170742 704.5506737073345 638.8672898424878 803.6571455420943 900.7890194201811 910.5807540172239 694.560332345357 1.0253705285219121 0.9499605038022106 0.9957340430129223 1.098767222914554 1.2964079196353393 1.0143836912313184 0.9198153998878577 1.1570731988513432 1.2969197598406481 1.311017505048726 1.0 9.439956207804238 -6.294724277514296 4.447437011919219 1.1289922211829946 0.9849323738589539 0.21929966858551264 0.12317740264842127 0.2808615148297429 13.336796846134424 0.019406156742615737 0.048511381419605266 5.073126859366012e-07 6.294724277514296 -0.14405984732404065 EKPQQHNFTHR ddPTM_A549_PD325901_60min_R1 1 EKPQQHNFTHR 11 1 F8WCR3;F8WDI9;E9PF19;Q96E41;Q9Y4P3 F8WCR3 TBL2 Transducin beta-like protein 2 0 52.693000000000005 0.050651999999999996 7046700.0 309.34 164.3 224.96 166.66 337.8 361.9 195.37 269.46 252.09 207.87 241.86 False True 340.7439690759281 178.14613761090013 240.2271383943739 176.9542096876779 314.07409334673594 358.9528063875625 202.80491226056608 264.08540891271946 241.49553396658936 194.74505272468392 212.11275327686099 1.6064284858495552 0.8398652832457189 1.132544529657849 0.8342459703811761 1.4806940577344236 1.692273570741114 0.9561184281826477 1.2450237189086928 1.1385243472436397 0.9181204322518608 1.0 7.728687555273786 -9.665565385617402 0.8009532220817037 1.0182726930129304 1.2111280600002248 0.10967941923479274 0.27399514236068384 1.1461695895841155 1.5576051491029372 0.09839163065871392 0.05783214673497175 2.1599048237759585e-10 9.665565385617402 0.19285536698729433 EKPQQS(ph)PAIEHGR ddPTM_A549_MK2206_60min_R1 2 EKPQQSPAIEHGR 13 1 A0A0S2Z4A4;A0A494C1P6;P58340-2;P58340-5;P58340-4;P58340;P58340-3;C9JNE5;A0A499FJ64;C9K0D4 A0A0S2Z4A4 MLF1 Myeloid leukemia factor 1 1 EKPQQS(1)PAIEHGR;EKPQQS(1)PAIEHGR 58.09 0.0051431 4952600.0 2385.78 2430.0699999999997 1531.47 1839.3 2416.14 2018.31 1745.95 1697.1 3202.3999999999996 3401.3 3231.7 True False 2788.4413372791782 2553.75018333182 1748.6554745418023 2289.928582569314 2060.7290066413047 2231.8862245542514 2063.16651505714 1937.669122150774 2477.061513181962 2632.9439676945585 2429.179699617423 1.1478942203075122 1.0512808845446946 0.7198543091798445 0.942675662459208 0.8483229984862188 0.9187818525347285 0.8493264270988566 0.7976639696338406 1.0197111039467686 1.0838819244657885 1.0 11.246253502572275 -8.820064569357942 24.999980860348636 1.009308167387845 0.9052541342196297 0.1865357053527007 0.11275692773630024 104.7611734199098 44673.43676671277 0.01910434771375675 0.02033813088055319 1.5133362342640282e-09 8.820064569357942 -0.10405403316821527 EKPS(ph)SPAKGSEGPGK ddPTM_A549_MK2206_60min_R1 1 EKPSSPAKGSEGPGK 15 2 O14503 O14503 BHLHE40 Class E basic helix-loop-helix protein 40 1 EKPS(0.499)S(0.499)PAKGS(0.003)EGPGK 40.856 0.032616 3908100.0 2569.8 2803.3 3072.7 2326.2 1330.3 1550.0 1094.3 993.31 2413.2 4743.4 3975.2 True False 3003.5194144221327 2945.9759961375958 3508.455063843627 2896.119104427085 1134.6146322377542 1714.0199711932712 1293.1201451513668 1134.114734384295 1866.6140530885318 3671.8626455656276 2988.048130061324 1.005177722609338 0.98591986069419 1.1741628351119038 0.9692344227292107 0.3797176560922626 0.5736252886790328 0.4327641620434099 0.37955035696196077 0.6246934359287657 1.2288498999145203 1.0 11.544987671223494 -6.542823141560791 24.935742114942563 0.7088211900378086 1.052091599114349 0.3312766689722506 0.2513576349151068 229.6044257454556 287065.18787454226 0.036867457918436916 0.07675281080023462 2.865344591226671e-07 6.542823141560791 0.3432704090765403 EKPSS(ph)PAKGSEGPGK ddPTM_A549_MK2206_60min_R1 2 EKPSSPAKGSEGPGK 15 2 O14503 O14503 BHLHE40 Class E basic helix-loop-helix protein 40 1 EKPS(0.155)S(0.841)PAKGS(0.005)EGPGK;EKPS(0.214)S(0.732)PAKGS(0.053)EGPGK 51.942 0.0042198 52592000.0 5809.799999999999 6828.5 6395.200000000001 6382.0 8182.900000000001 8070.5 6359.8 7504.700000000001 10529.8 12854.8 11617.7 True False 6790.35220402743 7176.041483118319 7302.135523901706 7945.590286498866 6979.206249822086 8924.514953235672 7515.293337415392 8568.514207179853 8144.817112635344 9950.891751953659 8732.704457791671 0.7775772370229252 0.8217433119147374 0.8361826006130834 0.9098659327019237 0.7992033033472187 1.0219646154717694 0.8605917415091202 0.9811982357349421 0.9326798074986048 1.1394971397520584 1.0 13.092212800328495 -2.0000000002987273 0.16710934063210628 1.0065398009230366 0.08409518969501703 0.5783315383498082 0.06892450104504867 24.313607425246726 0.24418713108099946 0.059942586253452196 5.638399525506863 0.009999999993121551 2.0000000002987273 -0.9224446112280196 EKPSS(ph)PAKGSEGPGK ddPTM_A549_PD325901_60min_R1 2 EKPSSPAKGSEGPGK 15 2 O14503 O14503 BHLHE40 Class E basic helix-loop-helix protein 40 1 EKPS(0.189)S(0.741)PAKGS(0.071)EGPGK;EKPS(0.209)S(0.639)PAKGS(0.152)EGPGK 56.347 0.0025434 90377000.0 12829.6 12795.7 12907.7 12092.0 16165.099999999999 17276.3 17052.5 21137.7 23495.7 25069.8 26119.0 True False 14132.051547347664 13874.03854551305 13783.694142305563 12838.895377075487 15029.719142567557 17135.607540739016 17701.442218986056 20716.091991295147 22508.257437497676 23486.888549561165 22906.52858198268 0.616944269698873 0.6056805375750297 0.6017364915409855 0.5604906623509084 0.6561325557810321 0.7480665382976088 0.7727684339262683 0.9043750089478666 0.9826132037833849 1.0253360069598225 1.0 14.48347121850508 -7.946143918451435 0.9096844728220069 0.9979843231521954 0.5947759143212744 0.9766071508763332 0.02598237821638811 0.048445415185057565 0.08038483546171771 0.004943039858090245 0.00780068951074743 1.1320251654998235e-08 7.946143918451435 -0.403208408830921 EKPSYDT(ph)ETDPSEGLMNVLK ddPTM_A549_MK2206_60min_R1 1 EKPSYDTETDPSEGLMNVLK 20 1 Q9HB71;Q9HB71-3 Q9HB71 CACYBP Calcyclin-binding protein 1 EKPS(0.143)Y(0.028)DT(0.675)ET(0.147)DPS(0.007)EGLMNVLK 44.632 0.016679 1107000.0 1069.7 1431.5 1657.3 1431.7 1891.3 1499.6 2276.9 1934.7 2191.7 1745.0 2149.2 True False 1250.239208345924 1504.3572355691401 1892.3300606333335 1782.4665642714554 1613.0922753899595 1658.2866766460827 2690.58325732902 2208.949649770258 1695.2834494257152 1350.8032880448661 1615.494325097553 0.7739050449901316 0.9312055215534715 1.1713628647498118 1.1033567475786827 0.9985131178300806 1.026488704344997 1.6654860469203734 1.3673521568309246 1.0493899130987936 0.8361547713659079 1.0 10.6577599673805 -5.525885533081166 3.522026701401827 1.1006049497021784 0.790523414009188 0.20889651501708673 0.2122192805899589 0.30267378324233024 7.607183518479121 0.0297533736758222 0.1756403494596223 2.9793015799376323e-06 5.525885533081166 -0.31008153569299035 EKPSYDT(ph)ETDPSEGLMNVLK ddPTM_A549_PD325901_60min_R1 1 EKPSYDTETDPSEGLMNVLK 20 1 Q9HB71;Q9HB71-3 Q9HB71 CACYBP Calcyclin-binding protein 1 EKPS(0.134)YDT(0.844)ET(0.022)DPSEGLMNVLK 89.365 1.2225e-06 2993700.0 1580.6 1936.1 1663.8 1618.7 1888.3 1930.8 1874.6 1546.3 2321.1 1391.3 2296.0 True False 1741.0613484237797 2099.2619417435417 1776.715473242173 1718.6834226655703 1755.6723222813541 1915.0762049547 1945.9389288204793 1515.4578334511175 2223.5522388426775 1303.4530805592558 2013.6065555431765 0.8646482321141049 1.0425382932751028 0.8823548316085505 0.8535348764803511 0.8719043536326571 0.9510677245675248 0.966394812066728 0.7526087106139353 1.1042635080430931 0.6473226246562578 1.0 10.975566103151962 -8.789269370134878 24.999706590699308 1.049235552740218 0.9040982609732229 0.0 0.141681529964115 143.90385455790513 129268.29010575206 0.013106660406049046 0.013954529632207316 1.624540825558762e-09 8.789269370134878 -0.14513729176699508 EKPTDTEGLEGS(ph)PEKHEPSAVPATEAGEGQQPWGR ddPTM_A549_MK2206_60min_R1 1 EKPTDTEGLEGSPEKHEPSAVPATEAGEGQQPWGR 35 2 O60237;O60237-6 O60237 PPP1R12B Protein phosphatase 1 regulatory subunit 12B 1 EKPT(0.001)DT(0.003)EGLEGS(0.99)PEKHEPS(0.006)AVPATEAGEGQQPWGR 100.11 2.1941999999999995e-11 22833000.0 2662.1 2259.9 2018.5 1733.4 3332.0 2666.4 2042.6 2905.7 4778.5 3398.4 4434.0 True False 3111.397397903791 2374.9192571866565 2304.7536519570267 2158.0830778152826 2841.8672138737115 2948.5566781869284 2413.713980157344 3317.5918733330423 3696.1773796964785 2630.699079708695 3332.915427825494 0.9335362583543775 0.7125651126215745 0.6915127916884244 0.6475061022545323 0.8526670644408884 0.8846779169883304 0.7242049888232933 0.9954023572381945 1.1089922500997837 0.7893086808461418 1.0 11.702568994428052 -8.362709153722884 4.480143271666788 1.0513691701436934 0.7743756343221411 0.3357135863649834 0.11615528935908656 0.09981778152983446 3.3850997283871096 0.01495580857258848 0.0181795364832438 4.338012971223135e-09 8.362709153722884 -0.2769935358215523 EKPTTALLDK ddPTM_A549_PD325901_60min_R1 1 EKPTTALLDK 10 1 Q12906-5;Q12906-2;Q12906-3;Q12906;K7ER69;K7EKJ9;K7EKY0;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 0 68.536 0.015502000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EKPVLNMRT(ph)PDTAK ddPTM_A549_MK2206_60min_R1 1 EKPVLNMRTPDTAK 14 2 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 EKPVLNMRT(0.999)PDT(0.001)AK 102.99 9.0939e-06 6876300.0 4952.1 5791.4 5627.4 5251.2 6157.8 4710.1 5540.6 4839.8 7378.1 7703.0 7664.8 True False 5787.89341277914 6086.1575229305745 6425.449938579624 6537.744235735324 5251.9957771883355 5208.5196556886585 6547.255301311948 5525.8564712658745 5706.972130404644 5962.886950034155 5761.4186222816525 1.0045951860528064 1.0563643994541605 1.1152548286857518 1.134745566040162 0.9115803105986466 0.9040342313515081 1.1363963861246185 0.959113863015479 0.9905498115227311 1.0349685278853624 1.0 12.492208371909545 -6.7515672318340005 24.999947461041145 0.9915926028450774 1.0788927860471147 0.28318341224905497 0.06641063864740378 200.82278646027086 508553.8262599058 0.008991135409727525 0.0185398108927825 1.7718737254133334e-07 6.7515672318340005 0.08730018320203725 EKPVLNMRT(ph)PDTAK ddPTM_A549_PD325901_60min_R1 5 EKPVLNMRTPDTAK 14 2 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 EKPVLNMRT(0.985)PDT(0.015)AK;EKPVLNMRT(0.994)PDT(0.006)AK;EKPVLNMRT(1)PDTAK;EKPVLNMRT(0.986)PDT(0.014)AK;EKPVLNMRT(0.99)PDT(0.01)AK 69.605 0.00094667 74445500.0 8286.7 8474.9 9539.300000000001 9538.2 11542.9 10062.800000000001 10205.2 9298.9 11429.3 10772.4 11236.2 True False 9127.95968365388 9189.10956566414 10186.694262470888 10127.352951176104 10732.166524843215 9980.851893110712 10593.564470499721 9113.426144654068 10948.966267461376 10092.228825570714 9854.218632140351 0.9262996919798676 0.9325051441108781 1.033739420926398 1.0277175014307987 1.089093608075567 1.0128506648469657 1.0750283574943154 0.924824837448793 1.1110943116027905 1.0241531269312487 1.0 13.266525765243134 -5.7718306681915506 4.356936323363423 1.044051755936328 0.9263898588322095 0.3973922684578556 0.04794050026029681 0.1372357647165509 6.099906015739032 0.0072375202606944624 0.027176688013643417 1.6911001645897752e-06 5.7718306681915506 -0.11766189710411856 EKQEASES(ph)PVK ddPTM_A549_MK2206_60min_R1 3 EKQEASESPVK 11 1 Q01167-2;Q01167;E9PPI7;Q01167-3 Q01167-2 FOXK2 Forkhead box protein K2 1 EKQEAS(0.075)ES(0.925)PVK;EKQEAS(0.087)ES(0.913)PVK;EKQEAS(0.006)ES(0.994)PVK 117.48 4.8348e-06 312198200.0 24986.699999999997 23435.699999999997 23658.8 22557.2 31977.6 22850.0 23012.6 25293.300000000003 31735.7 31670.5 31234.7 True False 29203.844093836684 24628.477028031924 27013.97359470939 28083.715012631183 27273.73740047057 25267.97183339756 27193.691540080727 28878.70273248258 24547.614621499128 24516.112053882483 23478.261956134636 1.2438673760604333 1.0489906396839033 1.1505951183771892 1.1961581766615048 1.1616591318142362 1.0762283801333639 1.1582497712517126 1.2300187631621882 1.0455465003057896 1.0442047243397703 1.0 14.519037992423554 -8.911503547087937 6.457674854317393 1.0198273716573525 1.152844159840361 0.514523997991776 0.05554805501191075 0.1136834350088452 6.7881035748314185 0.009392048925140747 0.009940836578725947 1.2260168891786523e-09 8.911503547087937 0.13301678818300844 EKQEASES(ph)PVK ddPTM_A549_PD325901_60min_R1 2 EKQEASESPVK 11 1 Q01167-2;Q01167;E9PPI7;Q01167-3 Q01167-2 FOXK2 Forkhead box protein K2 1 EKQEAS(0.004)ES(0.996)PVK;EKQEAS(0.18)ES(0.82)PVK 119.54 3.8081e-06 88908000.0 15151.4 13796.1 14052.3 13271.3 18417.5 13896.099999999999 15387.9 13963.599999999999 14718.599999999999 14922.5 16286.8 True False 16689.558974128842 14958.745764417152 15005.973581344497 14091.038059690865 17123.91833692572 13782.934768837267 15973.494955081984 13685.085043767709 14100.028427310253 13980.29080331021 14283.626850531635 1.168439861162269 1.0472652303893244 1.0505716607113673 0.9865168144718369 1.198849460022709 0.9649464322378506 1.118308054546206 0.9580959504874178 0.9871462321760003 0.978763373588821 1.0 13.802074729709046 -8.267622521271795 24.901453943027864 0.9910730006681586 1.0712631593844555 0.31653229937273375 0.06657746912718833 464.6343595707157 1871225.0355330226 0.009807969759955546 0.012011076477751886 5.399797565321582e-09 8.267622521271795 0.08019015871629687 EKQEEEVDYES(ph)EEEEER ddPTM_A549_MK2206_60min_R1 2 EKQEEEVDYESEEEEER 17 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 EKQEEEVDYES(1)EEEEER;EKQEEEVDYES(1)EEEEER 173.8 1.5690999999999999e-30 26066000.0 3759.6 3915.8 3706.8 3748.4 4812.1 4089.3 3586.3999999999996 4042.7 5625.6 4585.4 4590.5 True False 4394.12856660497 4115.097494265903 4232.479978733866 4666.758168272072 4104.246464550323 4522.027011742352 4238.002456886466 4615.765105249507 4351.41058223721 3549.5549553013934 3450.552158645227 1.2734566424668146 1.1925910129935824 1.226609477016468 1.3524670701121522 1.1894462902893064 1.3105227232727337 1.2282099391740282 1.337688837331406 1.2610765993885695 1.0286918707801935 1.0 11.752611525625362 -10.541778074075202 0.767814096540859 0.9930254461201663 1.263688698666847 0.7670789715669067 0.052647201502439844 0.24086863491835994 0.2456740496591593 0.03853526330112401 0.009869695266293822 2.8722479353301443e-11 10.541778074075202 0.27066325254668067 EKQEEEVDYES(ph)EEEEER ddPTM_A549_PD325901_60min_R1 2 EKQEEEVDYESEEEEER 17 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 EKQEEEVDYES(1)EEEEER;EKQEEEVDYES(1)EEEEER 166.59 8.735e-24 25312000.0 4159.5 4519.0 4231.3 4170.5 4278.5 3864.7 3916.3999999999996 3780.3 4614.8 4777.2 4223.0 True False 4581.76937793794 4899.831989431881 4518.461462873906 4428.102313107285 3977.992920023712 3833.2271645371998 4065.4407451363104 3704.898950912022 4420.856004399289 4475.5667767179475 3703.5977718026297 1.2371131154741684 1.3229924768658168 1.2200194895015997 1.1956218212519396 1.0740888090791587 1.0350009371216022 1.0977003971890724 1.0003513284080952 1.1936652619400279 1.2084375929785653 1.0 11.854711708277577 -6.491196191001426 2.001568948188745 1.081350123074673 1.2722247100096353 0.5610398685544342 0.06805279609458746 0.1963114304099755 1.5453875939548887 0.011050585768130115 0.030255025317960992 3.2270359902504176e-07 6.491196191001426 0.1908745869349624 EKQEEEVDYES(ph)EEEEEREGEENDDEDMQEER ddPTM_A549_MK2206_60min_R1 6 EKQEEEVDYESEEEEEREGEENDDEDMQEER 31 2 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER;EKQEEEVDY(0.001)ES(0.999)EEEEEREGEENDDEDMQEER;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER;EKQEEEVDY(0.002)ES(0.998)EEEEEREGEENDDEDMQEER;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER 265.1 2.6272999999999996e-153 852429000.0 5036.05 5597.45 4878.92 3858.67 6707.570000000001 6506.240000000001 5343.17 7165.379999999999 8151.000000000001 8293.02 8161.779999999999 True False 5886.012120398697 5882.336296358006 5570.824219770217 4804.044323222278 5720.895338464248 7194.725998307426 6313.954825887256 8181.094558055926 6304.811514472331 6419.621022247472 6134.98477233143 0.9594175599170857 0.9588184021070664 0.9080420614724982 0.7830572530331864 0.9325035922281811 1.1727373849003495 1.029172045277598 1.3335150553188626 1.0276816892695175 1.046395591917317 1.0 12.582844047635973 -7.024634618808789 23.226096501865953 1.0514494577292088 0.9006517066340017 0.4241584022997077 0.1038904158888097 292.1371507241735 275434.01086444367 0.016178092247007333 0.028131900911926137 9.448554690016823e-08 7.024634618808789 -0.1507977510952071 EKQEEEVDYES(ph)EEEEEREGEENDDEDMQEER ddPTM_A549_PD325901_60min_R1 5 EKQEEEVDYESEEEEEREGEENDDEDMQEER 31 2 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER;EKQEEEVDY(0.001)ES(0.999)EEEEEREGEENDDEDMQEER;EKQEEEVDY(0.022)ES(0.978)EEEEEREGEENDDEDMQEER;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER 427.04 0.0 1258429000.0 20196.98 18202.43 18898.3 18731.829999999998 23493.61 16989.2 17221.87 15840.899999999998 20389.88 19703.45 18799.73 True False 22247.362541369162 19736.41265753364 20180.852282709788 19888.852596027442 21843.499882154552 16850.84558795132 17877.257687018875 15524.940822554354 19532.9642513177 18459.370804388196 16487.482391307374 1.3493486763690825 1.197054358519842 1.2240105434987245 1.206300156930773 1.3248535685272973 1.022038731446077 1.0842927539042726 0.9416198576648369 1.1847147907564093 1.1195991217021983 1.0 14.009083498223413 -7.265792484648037 24.997742207320965 1.0728048504708274 1.251781499425185 0.6431990741387235 0.074239471496704 236.2958133792001 1356929.7667492367 0.012814261220020688 0.02092894759580031 5.4225993210177964e-08 7.265792484648037 0.1789766489543576 EKQEEEVDYES(ph)EEEEEREGEENDDEDMQEERNPHR ddPTM_A549_MK2206_60min_R1 8 EKQEEEVDYESEEEEEREGEENDDEDMQEERNPHR 35 3 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDY(0.003)ES(0.997)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR 242.07 4.497099999999999e-132 491106000.0 5597.219999999999 6180.67 5463.509999999999 5309.0599999999995 6869.920000000001 5485.11 4615.81 3983.3500000000004 8489.36 9785.779999999999 8915.48 True False 6541.893897109442 6495.239703223976 6238.317872184165 6609.779938332763 5859.363868527993 6065.540699478657 5454.442928987598 4548.002060997755 6566.533514722219 7575.165501480626 6701.520261269651 0.9761805742671937 0.9692188413966544 0.9308809984858974 0.9863105206937766 0.8743335303171783 0.9050992107766151 0.8139112792825034 0.678652288389277 0.9798572948697079 1.1303652314923325 1.0 12.71027269733701 -8.96430220031792 24.999763289173263 0.9911137887467808 0.8919383217924023 0.294685233406618 0.09294372587949977 194.6599286944385 136324.41657460702 0.01525029422718863 0.016178059867774458 1.0856699060561857e-09 8.96430220031792 -0.09917546695437851 EKQEEEVDYES(ph)EEEEEREGEENDDEDMQEERNPHR ddPTM_A549_PD325901_60min_R1 7 EKQEEEVDYESEEEEEREGEENDDEDMQEERNPHR 35 3 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR 267.36 6.124099999999998e-169 607237000.0 11744.619999999999 9753.04 11778.349999999999 12612.699999999999 13945.599999999999 14218.200000000003 12469.74 11401.310000000001 14707.339999999998 16022.39 13604.32 True False 12936.925176467717 10574.962909096863 12577.699659972317 13391.757833479987 12966.109165708222 14102.411693229184 12944.282779403547 11173.90192789534 14089.241645952554 15010.733561001813 11931.07488488988 1.0843050857766132 0.8863378204498182 1.0541966906855438 1.1224267689778722 1.0867511343952054 1.1819900410724262 1.084921761391075 0.9365377416285047 1.1808861969172522 1.2581208068698126 1.0 13.542436402569551 -5.985095766879068 24.50017540767516 1.0855285905037837 0.9815578433394044 0.17310905471278193 0.09471803013450746 238.16451904462446 391497.47364981147 0.011933315400415439 0.037079397100391466 1.0349139312084273e-06 5.985095766879068 -0.10397074716437926 EKQLS(ph)PEAQAR ddPTM_A549_MK2206_60min_R1 1 EKQLSPEAQAR 11 1 A0A0U1RRH6;O94880;B4DG57;O94880-2 A0A0U1RRH6 PHF14 PHD finger protein 14 1 EKQLS(1)PEAQAR 54.402 0.0052974 12956000.0 4183.2 4490.2 3910.8 3871.5 4570.3 4107.8 3596.8 3712.0 5809.4 6533.7 6044.5 True False 4889.221890579293 4718.732000805135 4465.410246258879 4820.017673798237 3898.0149242398033 4542.484669463043 4250.292002266684 4238.187367523234 4493.580175705501 5057.732632148275 4543.483830286693 1.0760953649681602 1.0385713203930085 0.9828163614213 1.060863833534122 0.8579352474538992 0.9997800892748887 0.9354698203027371 0.932805645586683 0.989016433986507 1.1131838080799625 1.0 12.149583229147273 -5.480123223607311 1.239158618308955 0.9800010074790414 1.099521553694883 0.16861957602299638 0.0633233693130775 1.0104642233799903 1.696085859195684 0.006976529570801982 0.13834882074961583 3.310371820361333e-06 5.480123223607311 0.11952054621584163 EKQPPIDNIIR ddPTM_A549_MK2206_60min_R1 1 EKQPPIDNIIR 11 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 0 65.574 0.0056661 1452300.0 881.14 1093.2 1135.6 884.32 1476.7 1090.2 909.98 700.93 1363.0 1438.8 1676.7 False True 1029.8548901953136 1148.8392105652695 1296.6451558892247 1100.978439698633 1259.4793861726614 1205.5642403838096 1075.3115870280913 800.2889740080973 1054.282676263745 1113.7740807100022 1260.3291154341462 0.8171317139178833 0.9115390547567636 1.0288147278439796 0.8735642351001139 0.9993257878032977 0.9565471634514516 0.8531990365529866 0.6349841197887596 0.8365137830689374 0.8837168538523684 1.0 10.299584805057332 -7.749110097201685 24.90304017303087 0.8899268545011404 0.9351823558863522 0.0820378482648978 0.10134637417326685 747.1414192919879 1509093.7945734714 0.018269997528119086 0.026990686476864256 1.7819269771276073e-08 7.749110097201685 0.04525550138521184 EKQS(ph)S(ph)EEEEKETR ddPTM_A549_MK2206_60min_R1 1 EKQSSEEEEKETR 13 2 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 2 EKQS(0.819)S(0.627)EEEEKET(0.554)R 51.658 0.021268000000000002 83348000.0 14655.0 14317.0 14561.0 12814.0 5363.2 2736.0 2815.7 2776.9 3990.7 19352.0 21771.0 True False 17128.405719649916 15045.674147148704 16625.96875211606 15953.430575242324 4574.280384588083 3025.5217039901854 3327.2762429888535 3170.534078899587 3086.81282183839 14980.369759452287 16364.659850967255 1.0466704395714965 0.9194003593212119 1.015967878558341 0.9748708937753677 0.2795218737355982 0.18488142934491594 0.20332083118685723 0.19374274245683074 0.18862676340052004 0.9154097852248883 1.0 13.998295994982982 -6.7438746628223445 24.058987288203863 0.4915697835155029 0.9861501467721717 0.4791811020244371 0.2779570310686655 158.9720888109995 217747.28897237458 0.05239552740371555 0.10884650781388282 1.8035381660020947e-07 6.7438746628223445 0.4945803632566688 EKQS(ph)S(ph)EEEEKETR ddPTM_A549_PD325901_60min_R1 1 EKQSSEEEEKETR 13 2 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 2 EKQS(0.998)S(0.979)EEEEKET(0.022)R 40.186 0.034816 219310000.0 4488.4 4352.7 4135.3 4247.2 4619.0 5082.6 4846.1 5354.1 5061.1 5180.9 5559.0 True False 4944.059063814556 4719.517304801981 4415.946325579009 4509.539897908947 4294.577374684941 5041.208990730658 5030.520987387676 5247.308275289802 4848.399567449342 4853.777089822075 4875.278241404409 1.0141080814272323 0.9680508621478067 0.9057834459735202 0.9249810317718186 0.8808886717915434 1.0340351342241443 1.0318428484070576 1.0763094977279128 0.9944867405255369 0.9955897590829319 1.0 12.251268843224697 -7.278199884415116 24.994963442245794 1.0090724195671326 0.9377917533925533 0.5084626963822279 0.039664150793701766 616.8973773460506 919978.2561832985 0.006274236792980353 0.010045793583300948 5.269872592512178e-08 7.278199884415116 -0.07128066617457929 EKQS(ph)SEEEEKET(ph)R ddPTM_A549_PD325901_60min_R1 1 EKQSSEEEEKETR 13 2 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 2 EKQS(0.975)S(0.064)EEEEKET(0.961)R 74.325 0.03317 403760000.0 15379.0 15051.0 15301.0 15673.0 19511.0 15923.0 16778.0 16512.0 17202.0 18613.0 18990.0 True False 16940.264758578567 16319.40059148909 16339.417872387588 16641.08561403441 18140.61466929593 15793.328367253827 17416.495971273882 16182.655206586587 16479.05976156639 17437.772003485545 16654.350387528277 1.017167548682319 0.979888150048169 0.9810900750967431 0.9992035250138727 1.0892418045245795 0.9483004740359473 1.0457625524869671 0.9716773593706229 0.9894747845528005 1.047040058466882 1.0 14.023611461513134 EKQS(ph)SEEEEKETR ddPTM_A549_MK2206_60min_R1 1 EKQSSEEEEKETR 13 2 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 EKQS(0.5)S(0.5)EEEEKETR 84.874 7.0531e-05 30922000.0 7479.5 8490.8 6687.3 8096.1 2231.2 1866.9 2190.0 1015.4 2252.5 12015.0 11182.0 True False 8741.856743781746 8922.945452860955 7635.659696176481 10079.644863447736 1902.9934356527683 2064.4541188520748 2587.8946521808384 1159.3360595320826 1742.3123465033639 9300.803155220094 8405.200792499923 1.040053290765192 1.0615981311027123 0.9084446504823401 1.1992152373613658 0.2264066597136901 0.24561627613872303 0.30789206778855926 0.13793079881762899 0.20728979467784436 1.1065533572403563 1.0 13.037066569190007 -6.753544940628635 24.99988156206992 0.5033883199676421 1.042712670290881 0.45328925249079743 0.30982898409447834 163.40951584186897 517476.11875454045 0.05193931598238772 0.10659132770655731 1.7638232352716565e-07 6.753544940628635 0.539324350323239 EKQS(ph)SEEEEKETR ddPTM_A549_PD325901_60min_R1 1 EKQSSEEEEKETR 13 2 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 EKQS(0.505)S(0.494)EEEEKETR 96.544 3.4119e-05 60313000.0 9288.8 10236.0 10097.0 10214.0 11473.0 11469.0 11126.0 11911.0 11386.0 11369.0 11824.0 True False 10231.792137946853 11098.623643245128 10782.243138193418 10844.895582322937 10667.176059701298 11375.600266534833 11549.406018380807 11673.425761001266 10907.486015881577 10651.159399754317 10369.722958511551 0.986698697629961 1.0702912399540327 1.0397812151136852 1.0458230779850644 1.0286847683761497 1.0970013675435417 1.1137622542655263 1.125722047513297 1.051858960892357 1.027140208313064 1.0 13.340089730622426 -2.017594281505312 24.589223165437094 1.0437914913782111 0.0010990194212576743 0.0 0.04359952578000485 0.0 0.0 0.0064649640110205605 0.0 0.009602973236688886 2.017594281505312 -1.0426924719569535 EKQSS(ph)EEEEKETR ddPTM_A549_MK2206_60min_R1 3 EKQSSEEEEKETR 13 2 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 EKQS(0.174)S(0.825)EEEEKETR;EKQS(0.171)S(0.829)EEEEKETR;EKQS(0.25)S(0.75)EEEEKETR 105.9 2.0223e-05 38126000.0 10226.0 11170.0 9037.0 10286.0 2293.3 2118.3 1755.4 1744.9 2927.1 13644.0 16340.0 True False 11951.898798303655 11738.505289072515 10318.582488350583 12806.070461756091 1955.9586079161393 2342.457099986263 2074.3334577343585 1992.2449185321348 2264.1165236181987 10561.810923830464 12282.327038941952 0.9730972608374088 0.9557232315875311 0.8401162463460561 1.0426420352717831 0.15924983935980858 0.19071769482764495 0.16888765876022868 0.16220419080322376 0.18433937774492273 0.85991936954158 1.0 13.584296302593792 -6.743439066431582 24.932844239874903 0.47852106905406977 0.9450412369728862 0.4537067028352183 0.2870031273272426 265.2450349307534 367397.8361564764 0.05466351584451442 0.11360784575562584 1.8053480182224616e-07 6.743439066431582 0.46652016791881645 EKQSS(ph)EEEEKETR ddPTM_A549_PD325901_60min_R1 3 EKQSSEEEEKETR 13 2 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 EKQS(0.055)S(0.945)EEEEKETR;EKQS(0.059)S(0.941)EEEEKETR;EKQS(0.382)S(0.618)EEEEKETR 148.36 3.9404e-13 144566000.0 22467.0 21879.8 25469.1 24252.6 27406.300000000003 26274.2 27003.9 24273.7 26512.0 29368.8 29550.5 True False 24747.833300668764 23723.68753316477 27197.58628414004 25750.62802034908 25481.376034602275 26060.23162638323 28031.548191601083 23789.542011150726 25397.79283796349 27514.44895588922 25915.975836053425 0.9549257746351353 0.9154078427624239 1.049452525198904 0.9936198499045396 0.9832304288211849 1.005566288193907 1.0816319774694552 0.9179489192938483 0.9800052677403311 1.0616790635223565 1.0 14.661554097305613 -5.738806802781668 24.999948465768952 0.9952740447734814 0.935166787261062 0.24658460801549287 0.04479430994718134 235.47568717602476 260102.52824421917 0.005140430985068807 0.019879748324844213 1.8247072483542018e-06 5.738806802781668 -0.06010725751241941 EKRES(ph)VAS(ph)GDDR ddPTM_A549_PD325901_60min_R1 2 EKRESVASGDDR 12 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 EKRES(1)VAS(1)GDDR;EKRES(1)VAS(1)GDDR 50.387 0.024141 36187000.0 2967.7 3609.2 3295.2 3219.7 3925.4 3042.6 3089.0 3142.6000000000004 3611.3999999999996 4369.0 5056.299999999999 True False 3268.9787192947283 3913.359950488499 3518.8320876473176 3418.5735565307605 3649.6934458948413 3017.8220743708157 3206.5535853656575 3079.918377677991 3459.6254169817958 4093.1405943817967 4434.407154526553 0.7371850633872943 0.882499016017016 0.7935293185821615 0.7709200886168401 0.8230397703037503 0.6805469072207959 0.7231076158833255 0.6945502003653572 0.7801776644371232 0.9230412210127348 1.0 12.114525525063254 -10.408976150295686 0.819574572295524 0.9966966344216338 0.7664532288011077 0.6147176755692024 0.05888482858425462 0.27270789317385996 0.3388021211810348 0.036339738462540586 0.011504009673589197 3.899634013083965e-11 10.408976150295686 -0.23024340562052614 EKRES(ph)VAS(ph)GDDRAEEDMDEAIEK ddPTM_A549_MK2206_60min_R1 3 EKRESVASGDDRAEEDMDEAIEK 23 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 EKRES(1)VAS(1)GDDRAEEDMDEAIEK;EKRES(1)VAS(1)GDDRAEEDMDEAIEK;EKRES(1)VAS(1)GDDRAEEDMDEAIEK 96.242 1.3819e-07 63076400.0 10078.3 9891.8 8181.6 8187.9 16216.7 14155.7 11085.199999999999 13826.8 17362.4 12274.7 11724.2 True False 11779.270649221951 10395.25036870612 9341.873905797182 10193.935867568796 13831.244912132592 15653.64677820683 13099.237350847041 15786.791242799083 13429.84412205549 9501.836744850612 8812.7575685412 1.3366157593248997 1.1795684027226536 1.0600398153632142 1.1567248716744432 1.569457097232066 1.7762484280840172 1.486394837140107 1.791356578235286 1.5239094026591464 1.0781910963679757 1.0 13.10537780301002 -4.160149365798555 16.346631598319675 1.3311692193559201 1.2389234974555685 0.0 0.27444460110651114 0.0 0.0 0.0414804018952568 0.0 6.915930721618627e-05 4.160149365798555 -0.09224572190035163 EKRES(ph)VAS(ph)GDDRAEEDMDEAIEK ddPTM_A549_PD325901_60min_R1 2 EKRESVASGDDRAEEDMDEAIEK 23 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 EKRES(1)VAS(1)GDDRAEEDMDEAIEK;EKRES(1)VAS(1)GDDRAEEDMDEAIEK 62.831 0.00016234 78023000.0 11205.8 13437.3 11411.7 11007.099999999999 11298.7 9680.599999999999 10381.0 12122.1 11954.099999999999 15694.9 15646.0 True False 12343.404566726047 14569.708429208451 12186.166586126761 11686.983568062147 10505.118290398947 9601.764403192698 10776.054635701164 11880.315205896519 11451.71074850254 14703.921335491605 13721.64118816575 0.8995574507057972 1.0618050879929815 0.8880983272348456 0.8517190770256844 0.7655875959982907 0.6997533510403809 0.7853327811103958 0.8658086188802776 0.8345729633550749 1.071586199774195 1.0 13.744165426105718 -5.906730272378696 9.402784522993207 0.8755776940442599 0.9803485982037021 0.15114672712556754 0.10469396928191985 0.46700029416666006 42.9437145922525 0.01514490816888833 0.04726146700144812 1.2395662058866979e-06 5.906730272378696 0.10477090415944224 EKRES(ph)VASGDDR ddPTM_A549_MK2206_60min_R1 3 EKRESVASGDDR 12 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EKRES(0.994)VAS(0.006)GDDR;EKRES(0.997)VAS(0.003)GDDR;EKRES(1)VASGDDR 75.574 0.00040375 21747200.0 4254.6 4660.8 3965.8199999999997 3773.51 3994.5299999999997 2739.9700000000003 2616.09 2930.53 3766.19 5704.4 5761.9 True False 4972.672465016887 4898.01481211362 4528.232909588414 4698.0201193993 3406.9399285218956 3029.9118067551153 3091.3996897825455 3345.941601871728 2913.1539783695907 4415.772078122139 4331.061209649914 1.1481418119737992 1.1309040844771467 1.0455250319481024 1.0847272508944863 0.7866293648612006 0.6995772306344354 0.7137741860804658 0.772545443231495 0.6726189812046237 1.0195589174042339 1.0 12.080504846408223 -6.749045195427286 10.274477725043273 0.8117258285997673 1.1005387094798402 0.6292533684223985 0.10820491022368339 0.15819579179897403 120.0675143542947 0.019006144970254452 0.03865403488163992 1.7821932915050803e-07 6.749045195427286 0.28881288088007295 EKRES(ph)VASGDDR ddPTM_A549_PD325901_60min_R1 1 EKRESVASGDDR 12 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EKRES(0.988)VAS(0.012)GDDR 53.828 0.0095649 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EKRES(ph)VASGDDRAEEDMDEAIEK ddPTM_A549_MK2206_60min_R1 1 EKRESVASGDDRAEEDMDEAIEK 23 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EKRES(0.988)VAS(0.012)GDDRAEEDMDEAIEK 88.595 2.0984e-07 7696800.0 517.46 460.04 464.37 617.25 905.49 649.35 544.17 635.53 910.23 578.23 650.95 True False 604.7945973176425 483.45407101028803 530.2246486793583 768.4762777094055 772.29362049535 718.0637859963551 643.0386451494276 725.6183237289979 704.064358338627 447.6074414018241 489.3011496939569 1.2360375562083252 0.9880501431739409 1.0836366295296829 1.5705589046542485 1.5783605270054981 1.4675293251313273 1.3141981079579086 1.4829687691983766 1.438918258783978 0.9147892697202714 1.0 8.934578862400208 -3.588523425511857 12.262609904994122 1.2727919257840732 1.2760764174395838 0.0 0.23630422676901888 0.0 0.0 0.03310028046845474 0.0 0.000257914984330753 3.588523425511857 0.0032844916555105907 EKS(ph)PFR ddPTM_A549_PD325901_60min_R1 1 EKSPFR 6 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 EKS(1)PFR 46.158 0.031414 16487000.0 3221.5 3493.3 3376.1 3023.4 3874.1 3212.3 3112.4 3184.5 3388.2 3501.4 3582.4 True False 3548.544308457045 3787.692650737417 3605.222448138538 3210.1485513604075 3601.9965809194473 3186.140093834669 3230.844085170631 3120.9826493080786 3245.8057367828856 3280.321006447339 3141.7875107046493 1.129466679833216 1.2055852401959235 1.14750677308853 1.0217586454917271 1.146480011346019 1.0141169900825255 1.0283458299336126 0.9933780176648851 1.0331079761835664 1.0440938463440574 1.0 11.61736989444151 -6.544651073942676 0.7089541238867414 1.0129274707997011 1.1843992826803007 0.6381987901466575 0.04205060270418428 0.3877794230838522 0.30944623064792576 0.006818094706028153 0.03788812068282785 2.8533097870530065e-07 6.544651073942676 0.17147181188059957 EKS(ph)PSLGK ddPTM_A549_MK2206_60min_R1 3 EKSPSLGK 8 1 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EKS(0.877)PS(0.123)LGK;EKS(0.597)PS(0.403)LGK;EKS(0.887)PS(0.113)LGK 91.93700000000001 0.0021128 1805750000.0 15452.900000000001 15565.2 16210.6 13763.5 19729.0 15853.0 14701.099999999999 16314.2 20782.2 20768.9 21133.2 True False 18060.97173286784 16357.402195655455 18509.506836965375 17135.558117867 16826.890234848277 17530.55393763027 17372.099575879336 18626.7878101421 16075.064882353918 16077.191065372504 15885.243193351764 1.1369653906480108 1.0297231207956135 1.165201351447481 1.078709208873712 1.059278100437934 1.103574791034178 1.0935998501521114 1.172584365465536 1.0119495614068783 1.0120834078323129 1.0 13.955399556548093 -8.873182311622932 9.183729179151323 1.0052884349599898 1.1015744837978063 0.532022900338742 0.04041601029614146 0.13961226102803287 10.827988474372527 0.00648396742049921 0.0068940081761755066 1.339114425218585e-09 8.873182311622932 0.09628604883781655 EKS(ph)PSLGK ddPTM_A549_PD325901_60min_R1 4 EKSPSLGK 8 1 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EKS(0.837)PS(0.163)LGK;EKS(0.927)PS(0.073)LGK;EKS(0.99)PS(0.01)LGK;EKS(0.979)PS(0.021)LGK 119.53 0.00071104 499339000.0 50246.3 50501.899999999994 50565.0 50061.9 57926.5 49952.0 48652.0 53776.7 50438.799999999996 55016.8 54811.2 True False 55347.26738662893 54757.87234943347 53996.644972046226 53154.10986417592 53857.94247557638 49545.207473532806 50503.478483395935 52704.08153149499 48319.03264165182 51543.02985877417 48069.76987682409 1.1513944736671924 1.1391332325856196 1.123297346968987 1.1057700088929103 1.120411905727532 1.0306936688170016 1.0506286718827254 1.0964080266359928 1.0051854370317657 1.0722545581318592 1.0 15.552842276464839 -7.286981490532088 0.3869018981517947 0.9940962745190111 1.1689328667154346 0.5722309554038745 0.033212399095083445 0.4496318589855831 0.12145328942509193 0.008798557686464132 0.03009275230167017 5.1643837921304284e-08 7.286981490532088 0.17483659219642356 EKS(ph)PSLGKK ddPTM_A549_MK2206_60min_R1 2 EKSPSLGKK 9 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EKS(0.94)PS(0.06)LGKK;EKS(0.675)PS(0.325)LGKK 56.225 0.0052604999999999996 259390000.0 7024.5 6871.9 7463.4 5759.4 10013.1 7082.700000000001 6282.8 6389.799999999999 9829.7 10655.2 11736.5 True False 8210.063867463716 7221.650357741929 8521.822346304722 7170.453258549286 8540.186254273363 7832.186612884249 7424.3034341195325 7295.573717941794 7603.288644805375 8248.182919642213 8822.003139078468 0.9306348839410327 0.8185953058384754 0.9659736243524957 0.8127919640820146 0.9680552273262348 0.8878013858542321 0.8415666280181197 0.8269747361146232 0.8618551280179665 0.9349557906078693 1.0 13.106890558437506 -10.691335475751673 0.9641714980724256 0.9996511567935382 0.878308204086472 0.24488698483532645 0.05588317847992232 0.40291755315231104 0.6693061553301265 0.03319799482628295 0.008832250189524632 2.0354691487900852e-11 10.691335475751673 -0.12134295270706619 EKS(ph)PSLGKK ddPTM_A549_PD325901_60min_R1 3 EKSPSLGKK 9 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EKS(0.881)PS(0.119)LGKK;EKS(0.877)PS(0.123)LGKK;EKS(0.58)PS(0.42)LGKK 54.7 0.0039473 1258630000.0 21055.1 20717.7 23329.100000000002 20857.6 29077.3 24552.0 25274.0 25040.0 26827.9 26153.5 29002.2 True False 23192.5982520546 22463.653287774472 24912.353015274646 22145.92658095348 27035.010759239332 24352.056652189665 26235.815900463458 24540.557556499996 25700.41665953533 24502.16354661578 25435.113260093345 0.9118338894304371 0.8831748873325848 0.9794473002941612 0.8706832304812079 1.062901135245038 0.9574188407643951 1.0314802073882008 0.9648298910861596 1.0104305963464388 0.9633204026285456 1.0 14.634533897945438 -6.755260087756488 24.999999745107015 1.0036801907116695 0.9141457238009724 0.5343755437916218 0.03900499431860677 72.49890425340493 293311.05048802635 0.004602402054262434 0.009391062673657326 1.7568711540536064e-07 6.755260087756488 -0.08953446691069711 EKS(ph)PVREPVDNLSPEER ddPTM_A549_MK2206_60min_R1 4 EKSPVREPVDNLSPEER 17 2 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 EKS(1)PVREPVDNLSPEER;EKS(1)PVREPVDNLSPEER;EKS(1)PVREPVDNLSPEER;EKS(1)PVREPVDNLSPEER 214.17 8.2461e-56 549045000.0 16046.3 18381.5 15630.400000000001 17919.1 22531.2 19038.1 16660.4 19598.800000000003 21545.4 26672.199999999997 23837.8 True False 18754.52314563072 19317.039836265558 17847.02575256336 22309.28030441897 19216.890326900153 21052.699105532007 19687.37902428935 22376.989918807747 16665.401300933885 20646.931495352594 17918.216370189122 1.0466735504340139 1.078067115452612 0.9960269138314345 1.2450614415804995 1.0724778588382078 1.1749327427788954 1.0987354219610617 1.2488402559998535 0.9300814856025754 1.152287206984691 1.0 14.129139414157457 -8.786596221658883 24.990712407276238 0.9669829056866279 1.118258283939671 0.07359399394419552 0.09404519092049858 142.04212532099308 141103.4320916305 0.012853255757949792 0.01368587258363576 1.6345709578244687e-09 8.786596221658883 0.15127537825304316 EKS(ph)PVREPVDNLSPEER ddPTM_A549_PD325901_60min_R1 4 EKSPVREPVDNLSPEER 17 2 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 EKS(1)PVREPVDNLSPEER;EKS(1)PVREPVDNLSPEER;EKS(1)PVREPVDNLSPEER;EKS(1)PVREPVDNLSPEER 269.53 9.167899999999998e-101 763320000.0 45825.1 47128.1 48760.8 48055.0 54013.7 50843.8 49006.0 53125.5 52851.9 53615.899999999994 54831.8 True False 50477.23041734435 51099.75038308134 52070.00111051025 51023.24820917653 50219.96404914914 50429.744950008164 50870.95014711214 52065.87022635146 50630.7184404331 50230.582923853246 48087.836207418295 1.0496881207051993 1.0626335974584444 1.0828102326317117 1.0610427133609601 1.044338194643117 1.0487006471343079 1.0578756325755516 1.0827243297405735 1.05287994706284 1.0445590171117827 1.0 15.553384390748324 -10.346761001170291 0.6670414462483645 0.9980777223230457 1.0614025461585168 0.3099130428167274 0.017598162092606378 0.29541797255926056 0.23386949381520983 0.009911344438343893 0.0027783085986509103 4.50027443677921e-11 10.346761001170291 0.06332482383547111 EKS(ph)RDRDYDR ddPTM_A549_PD325901_60min_R1 1 EKSRDRDYDR 10 3 Q92620 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 EKS(1)RDRDYDR 62.732 0.0020285 18175000.0 1547.4 2190.6 2176.6 1986.9 2071.9 2380.1 2203.3 2271.2 2443.8 2119.8 2590.0 True False 1704.4909088643278 2375.2095499113675 2324.3171649590763 2109.6263004226994 1926.3768916669687 2360.7172547196387 2287.1477871920215 2225.899134278068 2341.095584543422 1985.9554662326693 2271.4464193627305 0.7503989063244266 1.0456815224273477 1.0232762459839044 0.9287589979844514 0.848083791563715 1.0393013168155443 1.0069124975590207 0.9799478936873003 1.0306629135457361 0.8743131465939851 1.0 11.149395559050191 -7.293222524180883 24.975168007945157 1.0128599590838512 0.9325730326435593 0.09451610485919071 0.08678933091626781 763.7803342911991 600176.345600359 0.010827925259706042 0.017310397690129736 5.090699665135322e-08 7.293222524180883 -0.0802869264402919 EKS(ph)TFREES(ph)PLR ddPTM_A549_MK2206_60min_R1 1 EKSTFREESPLR 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 EKS(0.894)T(0.133)FREES(0.973)PLR 49.993 0.024832 21481000.0 2315.9 2428.6 2592.5 2063.6 3046.4 2466.7 2532.5 2167.3 3659.5 3432.2 3732.8 True False 2706.7673016811477 2552.2053666106976 2960.15548313034 2569.182092638526 2598.2785955416775 2727.724556737059 2992.6224687890303 2474.5214120778837 2830.6290930206706 2656.8636362335765 2805.8427399609845 0.9646895968655698 0.9096038527968914 1.05499693228406 0.9156543437192957 0.9260243129583973 0.9721587449961605 1.0665681387512982 0.8819173565344907 1.008833835448679 0.94690397234113 1.0 11.454218436657582 -7.529850589863365 24.84333706014087 0.99837195005287 0.9545672585863887 0.0072268111788948985 0.05681921127342337 246.92631214854129 879890.2320004435 0.007832185810773787 0.011632849035022647 2.9522247045256832e-08 7.529850589863365 -0.04380469146648136 EKS(ph)TFREES(ph)PLR ddPTM_A549_PD325901_60min_R1 1 EKSTFREESPLR 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 EKS(0.855)T(0.145)FREES(1)PLR 50.053000000000004 0.009453399999999999 8191900.0 1277.0 1255.8 1452.7 1423.6 1306.0 1345.7 1281.8 1567.0 1690.0 1437.1 1550.7 True False 1406.640099922286 1361.6306732304831 1551.2889577947496 1511.5325387698203 1214.2710654554091 1334.7410653654129 1330.5796004278734 1535.744955712281 1618.9751771333097 1346.3612607429802 1359.9737306972147 1.0343141695841043 1.0012183636314937 1.140675678345238 1.1114424526383362 0.8928636179118633 0.9814462112302229 0.978386251435701 1.129246044278336 1.190445918615879 0.9899906375785246 1.0 10.409363069256173 -8.265627932762888 24.86115571579153 1.09539411644389 1.0211033293188088 0.08810331608058997 0.08161006727172938 548.4749981716735 3255465.2442272143 0.015437871178445318 0.018998255915187175 5.42465430454372e-09 8.265627932762888 -0.0742907871250813 EKS(ph)TFREESPLR ddPTM_A549_MK2206_60min_R1 1 EKSTFREESPLR 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EKS(0.785)T(0.215)FREESPLR 53.169 0.0076447 10232000.0 4478.1 5280.9 5204.3 4719.9 7525.8 5732.1 5487.0 5211.1 8907.1 7347.6 7337.4 True False 5233.893800966515 5549.675253452375 5942.34799647261 5876.27571188436 6418.764789366976 6338.667017339969 6483.916875121585 5949.78938332444 6889.65607171592 5687.772056870177 5515.321078061974 0.948973546034359 1.0062288622736852 1.0774255772903596 1.0654458060942522 1.1638061861708444 1.1492834102719747 1.1756191132574942 1.0787747982598201 1.249184947567345 1.0312676227489552 1.0 12.429229160368903 -5.667433604927766 1.1347886150169868 1.1255970632649397 0.9228248305364057 0.3925512966367838 0.06679770033830652 0.8879442054148572 1.4300850140452466 0.013318321416935817 0.1793353219097331 2.1506334437025707e-06 5.667433604927766 -0.20277223272853395 EKS(ph)TFREESPLRIK ddPTM_A549_MK2206_60min_R1 1 EKSTFREESPLRIK 14 3 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EKS(0.356)T(0.356)FREES(0.289)PLRIK 42.813 0.022765999999999998 12590000.0 1838.1 2570.6 2819.2 2485.6 2930.0 1780.1 1822.0 1686.0 3826.8 3908.9 4247.3 True False 2148.3263427696 2701.4325600796583 3219.0049519926924 3094.5721115828246 2499.00088134753 1968.4690004652514 2153.0338156499956 1924.995663158451 2960.0359101438708 3025.876775151046 3192.5781904833634 0.6729126789042992 0.8461601874410648 1.0082775612475534 0.9693019017693344 0.7827532270929833 0.6165765982906815 0.6743871840219586 0.6029595982634344 0.9271616021707254 0.947784703964579 1.0 11.640506238541914 -8.965588572608704 16.212230969864162 0.9678728804356493 0.7796068528428427 0.30599380746267624 0.12591028312166086 4.017051599653594 1892.4020431014917 0.024395834043406468 0.025740207451396335 1.0824589294792143e-09 8.965588572608704 -0.18826602759280664 EKSPS(ph)LGKK ddPTM_A549_MK2206_60min_R1 1 EKSPSLGKK 9 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EKS(0.407)PS(0.593)LGKK 46.891000000000005 0.0073047 509100000.0 4799.8 4682.7 5058.5 4337.8 6501.9 5320.5 4290.2 4879.3 6935.9 7132.6 7531.4 True False 5609.888896156647 4921.02942857116 5775.871364094435 5400.561194731239 5545.47912301485 5883.511778537931 5069.673806751707 5570.955717229557 5364.929724356352 5521.340706194162 5661.145523934353 0.9909458911520642 0.8692638985812837 1.0202654815487504 0.9539696819130672 0.9795683752642491 1.0392793744063726 0.8955208420836375 0.9840686295161485 0.947675642972672 0.9753045002731124 1.0 12.466878294341736 -5.39048949994823 0.004099218673695935 1.9100181996844234 1.1117383144412683e-07 0.021327345608118886 0.04755155630399109 74498.5699474725 46.56881732981844 10523.288515936774 11183.091437530436 4.069213719351664e-06 5.39048949994823 -1.910018088510592 EKSPS(ph)LGKK ddPTM_A549_PD325901_60min_R1 1 EKSPSLGKK 9 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EKS(0.124)PS(0.876)LGKK 41.876000000000005 0.017230000000000002 3152600.0 1751.0 4932.2 1610.7 6742.9 3494.2 2639.2 1876.1 1902.5 8220.8 3520.6 2458.2 True False 1928.760230981929 5347.853803557405 1720.0117879259333 7159.393618763006 3248.7794463355954 2617.70723022397 1947.4960121413121 1864.553145017622 7875.3083646020805 3298.308715170647 2155.856983813692 0.8946605667552071 2.4806162206998996 0.7978320458360126 3.3209037856018178 1.506954993177949 1.2142304660642511 0.9033512087133948 0.8648779390362176 3.6529827459476136 1.5299292763548573 1.0 11.07404575979037 EKST(ph)FREES(ph)PLR ddPTM_A549_MK2206_60min_R1 1 EKSTFREESPLR 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 EKS(0.472)T(0.528)FREES(1)PLR 43.297 0.036282 4408900.0 594.03 739.1 657.47 462.94 705.76 544.25 637.21 807.92 925.32 1138.2 723.53 True False 694.2877413608761 776.7170330486559 750.709132302297 576.360320782166 601.9436389146186 601.842173756089 752.9828088201614 922.445134151231 715.7364974324053 881.0798294857684 543.8575325878618 1.276598557083903 1.4281626832541388 1.3803415183571401 1.0597634237768938 1.1068039014746438 1.106617335779678 1.3845221656436555 1.6961153958131623 1.3160367459225655 1.6200563138167574 1.0 9.08708496634669 -10.528448032051946 1.0304513432481002 1.0138872790418048 1.3025007899889396 0.0 0.24859929819800006 0.5223683528350634 1.054409056566135 0.09733931384691008 0.03329342099541964 2.961774351953548e-11 10.528448032051946 0.28861351094713483 EKST(ph)FREES(ph)PLR ddPTM_A549_PD325901_60min_R1 1 EKSTFREESPLR 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 EKS(0.479)T(0.521)FREES(0.999)PLR 42.277 0.042017 11271000.0 987.84 918.91 1058.6 1258.4 1503.3 855.4 969.35 1201.0 1137.1 1255.5 1382.4 True False 1088.1247895906274 996.3497706149251 1130.4429618789297 1336.128509966241 1397.7133941034572 848.4339060069656 1006.2391446986736 1177.045112833727 1089.3116413717669 1176.2275157350289 1212.3735637556133 0.8975160974476415 0.8218174664981117 0.9324213226632193 1.1020765792906828 1.1528735332810376 0.699812278468644 0.8299745019032008 0.9708600946292097 0.8984950463596113 0.970185717421441 1.0 10.243618583752381 -10.876556616305885 1.0879214419506826 1.000630514016855 0.9224694318446163 0.036928032131073096 0.11983559992621853 1.5068903511548652 3.1236280224413124 0.09051453874208121 0.02110506791371593 1.3287503248113721e-11 10.876556616305885 -0.07816108217223872 EKSTFREES(ph)PLR ddPTM_A549_MK2206_60min_R1 4 EKSTFREESPLR 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EKSTFREES(1)PLR;EKSTFREES(1)PLR;EKSTFREES(1)PLR;EKS(0.001)T(0.003)FREES(0.996)PLR 128.9 2.7437999999999997e-08 1024940000.0 21932.4 23071.300000000003 22223.0 20212.4 29276.4 21749.5 19914.5 19399.1 33747.5 33200.6 35162.8 True False 25634.052924302283 24245.53062451017 25374.555564746588 25164.43890736911 24969.880342212582 24051.01765385035 23532.70687253668 22148.981832252142 26103.745133683577 25700.56140118188 26430.90631608984 0.9698514541174673 0.9173174137335836 0.9600335024947594 0.9520838448150464 0.9447228197018784 0.9099581136651856 0.8903480868611426 0.8379955483694075 0.9876220217916968 0.9723677687713885 1.0 14.689938275407112 -8.961277973611864 24.99963452576177 0.9945392040467971 0.9233441474766593 0.3865752981007098 0.035550322610748954 103.47365660701472 66804.81732345889 0.006287456789652985 0.006681419137478309 1.0932563948981581e-09 8.961277973611864 -0.0711950565701378 EKSTFREES(ph)PLR ddPTM_A549_PD325901_60min_R1 5 EKSTFREESPLR 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EKSTFREES(1)PLR;EKSTFREES(1)PLR;EKSTFREES(1)PLR;EKS(0.171)T(0.171)FREES(0.657)PLR;EKSTFREES(1)PLR 144.68 1.696e-12 1742111000.0 25484.2 24259.8 26200.4 26255.5 29610.2 29056.6 28716.100000000002 30530.199999999997 29228.1 30139.899999999998 32283.4 True False 28071.337223523526 26304.25848577551 27978.51669980421 27877.242604433122 27530.481701644498 28819.97268328502 29808.90689955286 29921.25121052142 27999.744600455677 28236.86157029248 28312.746461333885 0.9914734786277253 0.929060644882992 0.9881950780724814 0.9846180992191795 0.9723705801287166 1.0179151189957443 1.0528440587797532 1.056812035221812 0.9889448428711899 0.997319762279331 1.0 14.789164083366037 -7.247261804025659 22.639278273311337 1.0061120180882703 0.972168182668111 0.37319636791250577 0.02687668547547484 272.4035188114624 434981.96101742785 0.004438445090034164 0.007655443719201278 5.658980481109106e-08 7.247261804025659 -0.03394383542015933 EKSTFREES(ph)PLRIK ddPTM_A549_MK2206_60min_R1 3 EKSTFREESPLRIK 14 3 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EKSTFREES(1)PLRIK;EKSTFREES(1)PLRIK;EKS(0.002)T(0.002)FREES(0.995)PLRIK 85.63600000000001 2.8142e-05 33477300.0 4984.2 6645.7 6751.9 6124.4 8895.5 5134.0 4735.799999999999 3929.2 10441.7 10047.6 11683.6 True False 5825.411108009492 6983.937743920246 7709.420947559401 7624.878274934759 7586.983733797596 5677.276472326612 5596.233558811878 4486.176132670334 8076.671621968557 7777.840181638738 8782.239669044187 0.6633172547707866 0.7952342462865559 0.8778422404860711 0.868215690105917 0.8639007838217336 0.6464497310791902 0.6372216848667422 0.5108236966571632 0.9196596684143532 0.8856328766629112 1.0 13.10037319109459 -8.972531070024152 21.842127665742286 0.9645564251680663 0.7408861232521584 0.38773404811796164 0.11247282212214722 31.17508033645287 24789.710409553794 0.0210796443762159 0.022029872336562804 1.0652926484410627e-09 8.972531070024152 -0.22367030191590787 EKSTFREES(ph)PLRIK ddPTM_A549_PD325901_60min_R1 4 EKSTFREESPLRIK 14 3 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EKS(0.001)T(0.001)FREES(0.999)PLRIK;EKS(0.004)T(0.004)FREES(0.992)PLRIK;EKS(0.005)T(0.005)FREES(0.989)PLRIK;EKSTFREES(1)PLRIK 137.73 4.7384e-10 219639000.0 12958.099999999999 13913.5 20769.3 22575.699999999997 15100.7 36754.4 27576.8 29157.1 26140.0 23429.0 24377.0 True False 14273.59677275096 15086.039474432506 22178.829593946783 23970.14971586528 14040.078926586904 36455.0843522825 28626.250214603995 28575.538767197533 25041.426704298654 21949.68894158185 21378.783538534863 0.6676524296634121 0.7056547182509332 1.037422431167323 1.1212120499119853 0.656729551579954 1.705199189026489 1.339002762388501 1.3366307168829625 1.1713214018544107 1.0267042978389271 1.0 14.383892145009543 -5.725188162270124 1.0784678233033131 1.1451435839241968 0.5558121658490097 0.35676805778106524 0.24578445807156554 0.8497307707145786 1.255218038858685 0.037670602746835063 0.47138312918530456 1.8828331571347387e-06 5.725188162270124 -0.5893314180751871 EKT(ph)MSSDDEDCSAK ddPTM_A549_PD325901_60min_R1 1 EKTMSSDDEDCSAK 14 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 EKT(0.405)MS(0.213)S(0.382)DDEDCSAK 70.235 0.00069363 23956000.0 3658.3 4623.8 4996.6 4055.2 4505.5 4206.1 3742.8 4252.9 3576.7 4540.2 5117.1 True False 4029.687922901879 5013.463853227511 5335.699322996662 4305.680493972587 4189.049223131198 4171.846916128013 3885.234302138747 4168.0725731644925 3426.3837373092924 4253.530997164619 4487.72913996951 0.8979347454399303 1.1171493859947113 1.1889530665910273 0.9594341279700853 0.9334451996716672 0.929612012225042 0.865746167150619 0.9287709759579678 0.7635005657521862 0.9478136635477779 1.0 12.131769888368357 -6.537227862575071 3.5345987050087238 0.8933763290214999 1.0741093057170907 0.3724906401720489 0.08702126594838683 0.19121610963295815 5.085090831626565 0.014922599575289365 0.03433056067332314 2.90249939191971e-07 6.537227862575071 0.18073297669559085 EKT(ph)PATT(ph)PEAR ddPTM_A549_MK2206_60min_R1 2 EKTPATTPEAR 11 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 EKT(0.999)PAT(0.215)T(0.786)PEAR;EKT(0.905)PAT(0.385)T(0.71)PEAR 60.55 0.0022026 23693400.0 4355.4 3815.1 3443.3 3006.5 4400.0 2945.6 2784.8 2951.7 4654.2 4176.9 4940.6 True False 5090.4850406935 4009.272294390376 3931.611716514062 3743.0926349669153 3752.7658286447545 3257.3014368689664 3290.7621129649306 3370.112514202134 3600.0311312301683 3233.3353890169637 3713.7126663767776 1.3707266818948456 1.0795860247050173 1.0586741812607365 1.0079112121021474 1.0105159353391975 0.8771010924889078 0.8861111261403829 0.9074779922298428 0.9693887100701517 0.8706476993470563 1.0 11.85864648151071 -2.00000112619224 0.7971813711633642 0.9663604732068949 100.53765903102558 0.835512574197091 0.05489997983597506 134.89067273570848 0.4464263558950693 0.008307647568390104 24266.952927853203 0.009999974068498988 2.00000112619224 99.5712985578187 EKT(ph)PATT(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 EKTPATTPEAR 11 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 EKT(0.985)PAT(0.071)T(0.944)PEAR 44.925 0.013558 16888000.0 2132.0 2276.5 2634.1 2702.3 2352.8 2372.0 2561.3 2796.6 3177.9 2889.9 3019.7 True False 2348.4390705045544 2468.3486443774445 2812.865866130066 2869.2149336314174 2187.5474447193596 2352.6832184340938 2658.77167309714 2740.81961910974 3044.343914444939 2707.4312208065794 2648.2960434554566 0.8867736204598737 0.9320516301330045 1.0621417771934143 1.0834192577230561 0.8260207351535672 0.8883762161893156 1.0039556112571217 1.034937021441742 1.1495481866418247 1.0223295192005664 1.0 11.370848689493085 -8.185083789713604 2.921049218824239 1.0706806833991807 0.9521167190512627 0.26526502332227286 0.07922811150424917 0.27779668367755045 4.652220301179089 0.014943944427842491 0.01946941051434789 6.5300455440115805e-09 8.185083789713604 -0.11856396434791794 EKT(ph)PATTPEAR ddPTM_A549_MK2206_60min_R1 2 EKTPATTPEAR 11 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKT(0.677)PAT(0.258)T(0.066)PEAR;EKT(0.597)PAT(0.121)T(0.282)PEAR 75.764 0.00051103 42293000.0 4450.0 5034.0 4970.7 3705.9 6025.0 4761.7 4048.3999999999996 3978.5 6715.9 6632.2 7088.2 True False 5201.051207945554 5290.2090980475405 5675.620003855731 4613.845666364173 5138.730481269238 5265.579933439351 4783.941876661603 4542.464558645255 5194.759373088542 5133.981413737054 5328.004315632084 0.9761724840736227 0.99290630875173 1.0652431318803104 0.8659613230468662 0.9644756604630506 0.9882837215409936 0.8978862615831164 0.8525639788462451 0.9749915850945149 0.9635843196812403 1.0 12.379379535640798 -8.988276832163027 20.907368350621 0.988967263716785 0.9503997852493687 0.04514845411166368 0.05840200646095224 20.47062891821873 36512.5033387272 0.010600267607265325 0.010667847524371134 1.027361218902214e-09 8.988276832163027 -0.03856747846741626 EKT(ph)PELPEPSVK ddPTM_A549_MK2206_60min_R1 4 EKTPELPEPSVK 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EKT(1)PELPEPSVK;EKT(0.999)PELPEPS(0.001)VK;EKT(1)PELPEPSVK;EKT(0.998)PELPEPS(0.002)VK 178.02 1.2733000000000002e-16 2432450000.0 40035.100000000006 40941.5 38317.2 36982.1 51271.1 41292.6 36098.5 39946.6 55639.0 57322.0 63224.0 True False 46792.04611578004 43025.247474714626 43751.155131418294 46042.716160189564 43729.189108415485 45662.15552419048 42657.13018344749 45609.152881331785 43036.85533722561 44372.920388142 47523.735906368755 0.9846036979914565 0.905342281159944 0.9206169148321336 0.968836209571211 0.9201547032112694 0.9608284082327627 0.8975963141342791 0.9597131204329331 0.9055865351582797 0.933700171963869 1.0 15.53636063239135 -10.950333055533457 1.180490984070733 1.000435957589585 0.9326569623674524 0.0 0.03376630647603702 0.3398324127236424 0.8327996194565104 0.01889129214515194 0.0042869487413300334 1.121158320876359e-11 10.950333055533457 -0.06777899522213249 EKT(ph)PELPEPSVK ddPTM_A549_PD325901_60min_R1 4 EKTPELPEPSVK 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EKT(1)PELPEPSVK;EKT(0.989)PELPEPS(0.011)VK;EKT(1)PELPEPSVK;EKT(0.99)PELPEPS(0.01)VK 152.88 4.0755e-12 3702896000.0 40522.899999999994 39520.4 44022.1 38169.6 50294.1 40750.2 43229.9 43957.4 46757.4 45061.8 48560.9 True False 44636.7549766177 42850.92280485588 47009.70443239227 40527.24950254881 46761.615921225784 40418.34388188577 44875.03750080896 43080.63517308678 44792.349081238455 42216.590257705095 42588.217152907964 1.048101046736817 1.0061685055048137 1.1038194969188186 0.9516070925683624 1.0979942117166757 0.9490499153032981 1.0536960807654954 1.0115623065039527 1.051754501025878 0.99127395040115 1.0 15.378166715953434 EKT(ph)PEVIDATEEIDKDLEEAGR ddPTM_A549_PD325901_60min_R1 1 EKTPEVIDATEEIDKDLEEAGR 22 2 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1;A6H8Y1-4;A6H8Y1-3;A6H8Y1-5 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 1 EKT(1)PEVIDATEEIDKDLEEAGR 53.55 0.0026936 2625600.0 677.79 729.92 592.19 860.18 568.46 571.99 922.66 859.9 760.42 882.49 651.92 True False 746.5987418373741 791.4329200544629 632.3795745277575 913.3113649894799 528.5333306805372 567.3319030826802 957.7723311989249 842.7486199214995 728.4621918317816 826.7694307933141 571.7379728613713 1.305840747468423 1.3842581000761354 1.106065373553717 1.5974299562763685 0.9244327922376605 0.9922935505636611 1.675194541313342 1.4740119773815337 1.2741189607995673 1.446063529164574 1.0 9.159210302050049 -10.313929582074234 0.9280093876288326 1.0161652595815271 1.3004153443657667 0.0 0.2562068760928871 0.6583047456940608 1.0994427552588444 0.10785823780939574 0.0418736298776822 4.8536719280413013e-11 10.313929582074234 0.2842500847842395 EKT(ph)PEVTDATEEIDKNLEETGR ddPTM_A549_MK2206_60min_R1 2 EKTPEVTDATEEIDKNLEETGR 22 2 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1;A6H8Y1-4;A6H8Y1-3;A6H8Y1-5 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 1 EKT(0.997)PEVT(0.002)DATEEIDKNLEETGR;EKT(1)PEVTDATEEIDKNLEETGR 71.97399999999999 0.00012375 9745900.0 1701.29 2176.9 2034.34 1985.8600000000001 2526.3 2419.3 2485.2 2371.24 3609.3 3323.2 3393.5 True False 1988.4261594529644 2287.6949117083223 2322.8400021413236 2472.3957891486443 2154.684616569373 2675.308720198633 2936.728671050148 2707.3705316179366 2791.799312867741 2572.486811937363 2550.8002941645964 0.7795303160352609 0.8968537901386581 0.9106318544243656 0.9692627818824876 0.8447092551692864 1.048811514691633 1.1512969783516298 1.0613808293073834 1.0944797674888433 1.0085018485462693 1.0 11.316734237347461 -7.273015270902518 23.18136925766487 1.0562037962449142 0.8877618041465617 0.706065473547977 0.05787073827896763 133.27397042624787 266888.44231348333 0.009264810291149863 0.014899459160036118 5.333161424010661e-08 7.273015270902518 -0.16844199209835253 EKT(ph)PEVTDATEEIDKNLEETGR ddPTM_A549_PD325901_60min_R1 1 EKTPEVTDATEEIDKNLEETGR 22 2 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1;A6H8Y1-4;A6H8Y1-3;A6H8Y1-5 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 1 EKT(1)PEVTDATEEIDKNLEETGR 100.95 2.9773e-10 10693000.0 1412.6 2079.2 1634.2 2178.6 2050.5 2008.7 1886.5 2330.8 1974.1 2096.8 2616.4 True False 1556.0061120988432 2254.4214809530345 1745.1066392429136 2313.167174040412 1906.4799538409775 1992.3418131823637 1958.2917898324101 2284.3103655227737 1891.1354421176727 1964.4076901578735 2294.5993867261195 0.678116677403508 0.9824902307542189 0.7605278068747289 1.0080919516590583 0.8308552529341945 0.8682743596584805 0.8534351578584072 0.9955159836340643 0.8241680238640263 0.8561005034350001 1.0 11.164026580682973 -10.94726335897428 1.0194032517330944 1.0058315045609705 0.8691754982751445 0.0 0.10424370073665992 0.7047859077534573 1.2047138704070173 0.0743869405048928 0.014547020786941 1.1291110068321522e-11 10.94726335897428 -0.13665600628582597 EKT(ph)PPKCEIQGNSLK ddPTM_A549_MK2206_60min_R1 1 EKTPPKCEIQGNSLK 15 2 O60765 O60765 ZNF354A Zinc finger protein 354A 1 EKT(1)PPKCEIQGNSLK 40.515 0.035761 3411700.0 1007.6 1173.6 1080.7 1096.2 1044.8 946.65 1118.6 1065.2 1652.8 1702.9 1599.7 True False 1177.658246545155 1233.3312271491043 1233.9595103641125 1364.7690492102886 891.1113040381907 1046.8238746645875 1321.8351406070715 1216.1953620381862 1278.4434389792486 1318.2137072845856 1202.450340526036 0.9793820225706492 1.025681631567054 1.026204133988845 1.134989947787152 0.7410795057435439 0.8705755567474275 1.0992845991700648 1.0114308433778123 1.0631985337706071 1.0962728878332777 1.0 10.231761598652259 -7.778274247614043 24.99981182055832 1.0336625066560023 0.9664405876971682 0.16134895797900417 0.09833218710229363 463.13066486490595 687748.2895091162 0.015575293694670228 0.0215513392937271 1.6661947141857e-08 7.778274247614043 -0.06722191895883411 EKT(ph)PPKCEIQGNSLK ddPTM_A549_PD325901_60min_R1 2 EKTPPKCEIQGNSLK 15 2 O60765 O60765 ZNF354A Zinc finger protein 354A 1 EKT(1)PPKCEIQGNSLK;EKT(1)PPKCEIQGNSLK 56.54 0.0041534 9085300.0 2756.9 2799.1 2886.0 2998.0 3215.1 3255.3 2874.3 3117.8 2604.4 2950.2 3129.8999999999996 True False 3036.7784584774877 3034.9899804423058 3081.8613149278217 3183.179651047991 2989.282467492868 3228.7899160912766 2983.6830593773107 3055.6130331332156 2494.9461250449654 2763.9238685157184 2744.9421420708127 1.1063178388840322 1.1056662848830314 1.122741812183638 1.1596527308391888 1.0890147452207217 1.1762688424665462 1.086974844987585 1.1131793950411026 0.908924850110958 1.006915164496176 1.0 11.422560025066618 -8.74913024233865 24.93802889633051 0.9569922932128638 1.1206589867453494 0.7723636135853935 0.03553758291537911 68.26680297533065 138306.88828994136 0.006649434946973765 0.007513163597695954 1.7818443227721797e-09 8.74913024233865 0.16366669353248553 EKT(ph)PPRPQGQRPEPENR ddPTM_A549_PD325901_60min_R1 4 EKTPPRPQGQRPEPENR 17 3 A9X3U0;Q96GF1 A9X3U0 RNF185 E3 ubiquitin-protein ligase RNF185 1 EKT(1)PPRPQGQRPEPENR;EKT(1)PPRPQGQRPEPENR;EKT(1)PPRPQGQRPEPENR;EKT(1)PPRPQGQRPEPENR 104.67 3.0374000000000003e-09 237693000.0 12477.7 11910.400000000001 12690.300000000001 13644.9 13750.0 14432.2 13731.099999999999 14136.6 13993.900000000001 14315.2 14340.599999999999 True False 13744.426918402758 12914.131207552437 13551.54007097316 14487.714483183698 12784.247434924862 14314.668948180655 14253.644524446223 13854.634423051844 13405.785048098112 13411.335828952691 12576.797112553339 1.0928399969721996 1.0268219397975653 1.07750327445824 1.1519399059656457 1.0164946862476187 1.1381807959589876 1.1333286525087667 1.1016027609464298 1.0659140739988031 1.0663554249091265 1.0 13.618476942611977 -9.889452151622162 0.8390939080690816 1.0069512979677346 1.0907798662523784 0.15615219277244352 0.04438478343231074 0.40011305584358764 0.579409005854694 0.016240300338014692 0.008343787812898594 1.289875662071897e-10 9.889452151622162 0.0838285682846438 EKT(ph)PS(ph)PKEEDEEPES(ph)PPEK ddPTM_A549_PD325901_60min_R1 1 EKTPSPKEEDEEPESPPEK 19 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 EKT(1)PS(1)PKEEDEEPES(1)PPEK 77.984 0.00016921 26816000.0 2838.9 3625.7 3531.2 2735.7 4047.7 3373.8 3238.5 2944.4 3397.1 4009.6 4038.9 True False 3127.10303811228 3931.2504633952544 3770.8484668306064 2904.6779757745117 3763.403515806936 3346.324891379826 3361.7428896751962 2885.671632162884 3254.3317007334704 3756.4331717173836 3542.1409046965778 0.8828285272237497 1.1098515189451528 1.0645676070736716 0.8200345649500153 1.0624657846945 0.9447181750852666 0.9490709094089992 0.8146687864214348 0.9187471047293752 1.0604979510376542 1.0 11.790405887622523 EKT(ph)PS(ph)PKEEDEEPES(ph)PPEKK ddPTM_A549_MK2206_60min_R1 2 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 EKT(1)PS(1)PKEEDEEPES(1)PPEKK;EKT(1)PS(1)PKEEDEEPES(1)PPEKK 78.45 6.6164e-05 24528000.0 5821.0 6039.0 5857.9 5092.9 8083.099999999999 6054.6 6511.0 6197.0 8587.8 8886.599999999999 9274.7 True False 6803.442490213724 6346.359305345465 6688.638304582151 6340.660728628971 6894.086697617826 6695.293753281795 7693.964420250885 7075.443727516555 6642.677011898592 6879.110887988258 6971.53602130201 0.9758885946261104 0.910324394215812 0.9594210349260986 0.9095069880231047 0.9888906370923807 0.9603756952304143 1.1036254272719017 1.0149045642017838 0.9528283281620339 0.9867425007872954 1.0 12.767260841211042 -6.784770782752627 24.030610066989258 0.9891001012132175 0.9382263287541088 0.3124066562625979 0.04212324477464244 170.30572907857118 175409.15857814864 0.006483024051226152 0.012258329403819154 1.641455892258234e-07 6.784770782752627 -0.050873772459108624 EKT(ph)PS(ph)PKEEDEEPES(ph)PPEKK ddPTM_A549_PD325901_60min_R1 2 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 EKT(1)PS(1)PKEEDEEPES(1)PPEKK;EKT(1)PS(1)PKEEDEEPES(1)PPEKK 72.425 0.0011923 27858000.0 5643.9 4919.0 6164.8 4682.7 7990.1 5919.700000000001 6341.8 6218.1 6981.2 6266.0 7990.599999999999 True False 6216.864573180418 5333.541393232002 6583.180399953925 4971.939743816688 7428.902940348594 5871.491925870278 6583.140669366118 6094.0751174949155 6687.80444177696 5870.36369063775 7007.806856586807 0.8871341206182126 0.7610856723625135 0.9394066552742153 0.7094858413718182 1.060089567589322 0.8378501357170711 0.9394009857989258 0.869612311270672 0.954336296453566 0.837689138809534 1.0 12.774747297774079 -7.749867200654455 0.221926319049348 1.0240729388945122 0.7848656858060663 0.0 0.09909083204942035 2.709586193475302 0.36207538088113306 0.10817004548178355 0.2158739333773456 1.7788232586513758e-08 7.749867200654455 -0.23920725308844593 EKT(ph)PSEDKLSVK ddPTM_A549_MK2206_60min_R1 4 EKTPSEDKLSVK 12 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EKT(0.847)PS(0.153)EDKLSVK;EKT(0.988)PS(0.012)EDKLSVK;EKT(0.825)PS(0.175)EDKLS(0.001)VK;EKT(0.917)PS(0.082)EDKLS(0.001)VK 89.541 9.4934e-05 55111700.0 11350.7 12349.0 11526.7 11400.9 15464.5 12833.2 11613.900000000001 10561.7 16352.5 16634.2 16507.3 True False 13266.420662028684 12977.51135315634 13161.359385688907 14194.121011805844 13189.692535699278 14191.200706011277 13723.995297243406 12058.853318849711 12648.684859576579 12876.522667046367 12408.081831696836 1.069175787359751 1.045891825117149 1.0607086223486857 1.1439416022826763 1.0629920655427814 1.1437062471460664 1.1060529325479647 0.9718547542171256 1.0193908318097253 1.03775288088066 1.0 13.598992485687438 -8.253316332578441 24.990980113038432 1.0066149807196438 1.0905633713936982 0.586302717778395 0.03357841680186972 312.6529472448609 961893.8189506119 0.005227401040975406 0.00668809023958342 5.580635628297382e-09 8.253316332578441 0.08394839067405435 EKT(ph)PSEDKLSVK ddPTM_A549_PD325901_60min_R1 2 EKTPSEDKLSVK 12 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EKT(0.894)PS(0.106)EDKLSVK;EKT(0.949)PS(0.051)EDKLSVK 108.36 0.00021627 23080000.0 9638.7 9071.2 10217.1 10350.4 12272.9 10735.2 10016.8 11544.2 9933.6 11084.900000000001 12080.9 True False 10617.213728364095 9835.66185937917 10910.493846413387 10989.720700536065 11410.89384320649 10647.776090444224 10397.99480540328 11313.9418747503 9516.125337024529 10384.99752223913 10595.025887134827 1.0020941752729655 0.9283282517810809 1.0297751003762645 1.0372528408713473 1.0770048100649139 1.0049787705920992 0.9814034355526403 1.0678541039232785 0.8981691445020092 0.9801767011111575 1.0 13.371099492242582 -8.761043290658913 24.999999966495277 0.9519132096557503 1.0148272525263322 0.2343993669776957 0.04498706562931046 11.615155646440616 733115.1290322265 0.00898209147520941 0.00988105750772341 1.7336311800466662e-09 8.761043290658913 0.06291404287058189 EKT(ph)PSPKEEDEEPES(ph)PPEKK ddPTM_A549_MK2206_60min_R1 3 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 EKT(0.957)PS(0.043)PKEEDEEPES(1)PPEKK;EKT(0.936)PS(0.064)PKEEDEEPES(1)PPEKK;EKT(0.855)PS(0.145)PKEEDEEPES(1)PPEKK 169.57 1.3978999999999999e-33 278848000.0 21379.8 23615.3 23497.8 18097.5 32807.0 24717.8 23767.4 23532.199999999997 33250.0 35090.0 35760.0 True False 24988.187554075146 24817.2179008983 26830.14137377055 22531.388312427654 27981.13375917012 27333.421189652265 28085.62892979128 26867.961414340014 25718.928089339315 27163.144628936596 26879.805074208314 0.9296268140743249 0.9232662897809067 0.9981523786984074 0.83822736996136 1.040972346411044 1.0168757219106177 1.044859843747155 0.9995593844584958 0.9568122989856469 1.0105409824939597 1.0 14.714235055631425 -6.787381519456213 24.99999229895669 0.9921291884782686 0.9278025264385434 0.45653609616260027 0.043147474772036114 196.26343861879198 189135.26548451866 0.006345060302112701 0.01199381161391034 1.6316179727177822e-07 6.787381519456213 -0.06432666203972515 EKT(ph)PSPKEEDEEPES(ph)PPEKK ddPTM_A549_PD325901_60min_R1 2 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 EKT(0.861)PS(0.139)PKEEDEEPES(1)PPEKK;EKT(0.5)PS(0.5)PKEEDEEPES(1)PPEKK 188.55 3.3688999999999998e-43 485530000.0 27369.0 28852.0 29389.0 27380.0 34322.0 32944.0 31495.0 32521.0 31638.0 33372.0 36211.0 True False 30147.480732007098 31283.4592961028 31383.514270413638 29071.200415508338 31911.34112447207 32675.714986548388 32693.559459725286 31872.343142769023 30308.36488410866 31264.886224698843 31757.27656044165 0.9493093866103182 0.9850800409966811 0.9882306567026724 0.9154185611659403 1.0048513153745158 1.0289205664206984 1.0294824682935788 1.0036233139232948 0.9543754429453243 0.9844951964062262 1.0 14.954799574737635 -5.260899939302599 20.599840714966113 0.9846266523798398 0.9493093031064936 0.10328071685442342 0.031186174649145585 8.055832548654543 306425.7436684682 0.0046141385736993305 0.037583515248560385 5.484033015384893e-06 5.260899939302599 -0.03531734927334618 EKTES(ph)ELKFEEDER ddPTM_A549_MK2206_60min_R1 1 EKTESELKFEEDER 14 2 A0A0A6YYJ5;O94854-2;O94854 A0A0A6YYJ5 MACF1;KIAA0754 Uncharacterized protein KIAA0754 1 EKT(0.196)ES(0.804)ELKFEEDER 66.893 0.00082245 9657700.0 3488.3 3761.4 3338.7 3152.7 5132.0 4090.3 3512.5 4226.2 5568.6 5230.9 5180.6 True False 4077.0397592531435 3952.839193761624 3812.177863655649 3925.1116415300817 4377.089598319289 4523.132831078601 4150.675783463558 4825.276792194686 4307.320991226919 4049.236056982173 3894.1140427137466 1.0469749253701668 1.015080490813503 0.9789589677756336 1.0079601158251477 1.1240270701648387 1.1615306540756833 1.065884495917592 1.239120564849207 1.1061106439053376 1.0398349952176347 1.0 11.92707941999106 -6.736381832702049 24.27716371484645 1.0797733769929259 1.0100687220210667 0.2783843666412412 0.06412986805237463 246.71641849605 239030.75637165026 0.010917010363590718 0.022717309550830407 1.8349243642463485e-07 6.736381832702049 -0.06970465497185918 EKTES(ph)ELKFEEDER ddPTM_A549_PD325901_60min_R1 1 EKTESELKFEEDER 14 2 A0A0A6YYJ5;O94854-2;O94854 A0A0A6YYJ5 MACF1;KIAA0754 Uncharacterized protein KIAA0754 1 EKT(0.258)ES(0.742)ELKFEEDER 62.617 0.0019684 17950000.0 8545.1 9557.7 9041.8 11145.0 10257.0 12313.0 8349.7 10240.0 9734.6 9354.9 10771.0 True False 9412.592261429854 10363.16092175107 9655.430920760347 11833.401337868534 9536.58370472904 12212.727010362134 8667.452402631157 10035.755166875399 9325.48861498338 8764.230017482776 9446.235282994576 0.9964384730470046 1.097067838274913 1.0221459270808522 1.2527108401768705 1.009564489876418 1.2928671205499072 0.9175562690286353 1.0624079187337305 0.987217482479124 0.9278013679439503 1.0 13.205523754660634 EKTMS(ph)SDDEDCSAK ddPTM_A549_MK2206_60min_R1 3 EKTMSSDDEDCSAK 14 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 EKT(0.165)MS(0.491)S(0.344)DDEDCSAK;EKT(0.269)MS(0.365)S(0.365)DDEDCSAK;EKT(0.144)MS(0.428)S(0.428)DDEDCSAK 69.188 0.00066762 25775900.0 10491.9 11384.599999999999 11739.7 9367.1 12631.7 10788.9 10722.1 10337.599999999999 14899.2 14346.5 15269.3 True False 12262.676217672797 11964.027512441791 13404.565988545912 11662.0399205051 10773.593663111807 11930.574236907796 12670.166780889582 11802.98645757224 11524.554989133367 11105.615685923021 11477.511398758641 1.0684089774895869 1.0423886412986503 1.167898294572436 1.016077398256073 0.9386698290952717 1.0394739610712262 1.1039123674719185 1.0283576332452 1.0040987622438617 0.9675978790249041 1.0 13.486522244396452 -4.9925321468840105 0.20240703449833208 0.9914726946550317 1.1691924802262894 0.21470871377142398 0.05343803897905439 18.92941688675857 0.6061069976839376 0.05393390212243517 0.8689878319494431 1.0173440586341105e-05 4.9925321468840105 0.17771978557125767 EKTMSS(ph)DDEDCSAK ddPTM_A549_PD325901_60min_R1 2 EKTMSSDDEDCSAK 14 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 EKT(0.007)MS(0.096)S(0.897)DDEDCSAK;EKT(0.051)MS(0.196)S(0.754)DDEDCSAK 98.165 1.1082e-05 34926800.0 9091.5 9354.900000000001 9206.8 9443.400000000001 9612.5 9101.1 9559.8 10390.7 8340.9 9397.1 10828.2 True False 10014.462387191434 10143.270254024403 9831.628812985955 10026.697370482516 8937.351161324748 9026.983659060092 9923.60342032329 10183.449337153546 7990.360979261079 8803.765502280883 9496.400045615255 1.0545535507231902 1.0681174134726796 1.0353006155764766 1.055841931923678 0.9411304408401966 0.9505690172801949 1.0449858233284186 1.0723483939427678 0.8414094752622016 0.927063461942699 1.0 13.213164995933893 -6.946038759345381 0.5697748689140079 0.9360545338106583 1.0731222569466345 0.24416916637869168 0.0618155872758206 1.094642954730303 0.6034391325727836 0.01669030049160889 0.07061930831169266 1.1322993047600118e-07 6.946038759345381 0.13706772313597626 EKTPAT(ph)TPEAR ddPTM_A549_PD325901_60min_R1 1 EKTPATTPEAR 11 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKT(0.142)PAT(0.51)T(0.348)PEAR 84.566 0.0002008 36092000.0 5485.7 5211.6 4851.4 5552.5 6335.3 5405.4 5102.9 5096.6 6212.6 5613.9 6696.6 True False 6042.604225641105 5650.799822111789 5180.645177838125 5895.465314357561 5890.330383598506 5361.380214554656 5297.093651914024 4994.944314794648 5951.506026898463 5259.437395925831 5872.960653244968 1.0288855285114848 0.9621722595722774 0.8821181485313851 1.0038319107587002 1.0029575764897967 0.9128922414272178 0.9019460481124181 0.8504985150947346 1.0133740677472607 0.895534246942358 1.0 12.519872256984314 EKTPATT(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 EKTPATTPEAR 11 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKT(0.026)PAT(0.208)T(0.765)PEAR 51.643 0.009589299999999999 37917000.0 3918.2 4085.5 4310.1 3850.3 4919.0 3833.1 3742.3 4283.8 4761.2 4840.1 4533.7 True False 4315.972779573614 4429.799423063497 4602.609304736799 4088.1242863342504 4573.506409628756 3801.8845044602544 3884.7152743651345 4198.35624842391 4561.103321519 4534.495259983365 3976.083641492205 1.0854833974151135 1.1141112266443707 1.157573562262755 1.0281786438476423 1.1502540746130634 0.9561882614303923 0.9770205117986953 1.0559023971760029 1.1471346512738951 1.1404426236570795 1.0 11.957132390630898 -6.266418327043557 24.759115900591464 1.058757511765384 1.1185615777202462 0.15143459521268954 0.0654269606691266 608.1522175322646 3024206.861486423 0.010179857016299629 0.02433877581613293 5.414790682835535e-07 6.266418327043557 0.05980406595486221 EKTPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 EKTPSPK 7 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKT(0.448)PS(0.552)PK 47.067 0.016836 51540000.0 2943.6 3523.9 2978.2 3124.9 2871.9 2504.4 2128.2 2313.6 2883.1 3502.8 4106.2 True False 3242.432105036211 3820.8714201281246 3180.3185613714636 3317.9179758371797 2670.1876515171425 2484.004996731173 2209.189815595725 2267.4534330159113 2761.9333332503206 3281.632610208411 3601.1634313464256 0.9003846026015848 1.061010279863792 0.8831364146620766 0.9213461257981995 0.7414791642818599 0.6897784685663204 0.613465580696997 0.6296446901795127 0.7669558424394173 0.9112701138869039 1.0 11.814247359403472 -6.2920625726662935 2.134201993648481 0.823491629795584 0.9718701005387465 0.23813540746606354 0.12441246522215105 0.5358128091446885 4.693942361521415 0.023120396694844423 0.07141119530100844 5.104314522808288e-07 6.2920625726662935 0.14837847074316246 EKTPS(ph)PKEEDEEPES(ph)PPEKK ddPTM_A549_PD325901_60min_R1 1 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 EKT(0.28)PS(0.72)PKEEDEEPES(1)PPEKK 188.55 2.1562999999999998e-44 162160000.0 17075.0 20710.0 21470.0 19030.0 23800.0 21848.0 22774.0 22293.0 22894.0 24127.0 25686.0 True False 18808.441430049366 22455.304381751317 22927.083309598165 20205.439879734236 22128.370105542665 21670.077131681308 23640.67703241099 21848.348626479827 21931.844796029574 22603.617102460415 22526.78483696952 0.834936790410594 0.996826868293211 1.0177698892907123 0.8969517854396318 0.9823137329934006 0.9619693750578094 1.049447455706747 0.9698831317740343 0.9735896602535321 1.0034107071225187 1.0 14.45935379739435 -6.969435469407289 24.888930051018196 0.988642559465056 0.9458323681733033 0.2083000236594038 0.05026916300274424 285.56303517969627 232534.78590347944 0.006798013986268088 0.01284695289036342 1.0729130571185693e-07 6.969435469407289 -0.042810191291752675 EKTPSPKEEDEEPES(ph)PPEK ddPTM_A549_MK2206_60min_R1 4 EKTPSPKEEDEEPESPPEK 19 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(0.999)PPEK;EKTPSPKEEDEEPES(1)PPEK;EKTPSPKEEDEEPES(1)PPEK;EKTPS(0.001)PKEEDEEPES(0.999)PPEK 196.28 4.0556e-55 620739000.0 26117.5 29732.8 25253.2 24591.66 38642.1 29219.8 26999.74 28721.999999999996 45677.8 42127.1 43271.4 True False 30525.495488431006 31246.07252094315 28834.483489522514 30616.617803961577 32957.898278880355 32311.81984146655 31905.243267704587 32793.43145743596 35331.85123245787 32610.558851458398 32525.9171501146 0.9384976093848119 0.9606515437131359 0.8865079301667261 0.9412991388577555 1.0132811359867906 0.9934176396115152 0.980917559386705 1.0082246507019839 1.0862676391073998 1.002602284847285 1.0 14.989302117484584 -7.237341985980686 0.8427878339703757 1.037918920402937 0.9282129225090248 0.5264396453074873 0.03379748473032176 0.34837478410594386 0.4842319342767204 0.007317632931617557 0.018640682777826465 5.789726038436938e-08 7.237341985980686 -0.10970599789391233 EKTPSPKEEDEEPES(ph)PPEK ddPTM_A549_PD325901_60min_R1 3 EKTPSPKEEDEEPESPPEK 19 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEK;EKTPSPKEEDEEPES(1)PPEK;EKTPSPKEEDEEPES(1)PPEK 214.57 5.144499999999999e-67 792739000.0 37715.7 37527.3 40472.6 37881.4 43789.0 41866.6 41112.7 43532.1 43697.0 48432.3 47387.4 True False 41544.57009916915 40689.85727307082 43219.31401751482 40221.248043098516 40713.41170384909 41525.65229042698 42677.26629623264 42663.81811522819 41860.567050410755 45374.27631249198 41559.05021347855 0.9996515773523451 0.9790853511824043 1.0399495126935747 0.9678096067280635 0.9796521213722251 0.999196374246283 1.0269066804224374 1.0265830883062708 1.00725514263159 1.09180253348947 1.0 15.342875062955143 -7.528506989466806 24.95264059911726 1.0074727828246712 0.9932068723932528 0.07970948730303251 0.03185885809902143 256.78357179359944 1138437.3118680355 0.002929460209894731 0.004351453517960827 2.9613723051526368e-08 7.528506989466806 -0.01426591043141845 EKTPSPKEEDEEPES(ph)PPEKK ddPTM_A549_MK2206_60min_R1 3 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPS(0.001)PKEEDEEPES(0.999)PPEKK 256.75 3.457299999999999e-98 1196874700.0 42841.0 39679.9 41673.71 34543.1 52609.4 41150.6 37773.43 34489.1 58632.2 62367.0 61630.1 True False 50071.51343811138 41699.4374234439 47583.66872088091 43006.16105069868 44870.62695125077 45505.12917844247 44636.37328380242 39378.03554343898 45352.100316383774 48278.251384237316 46325.64526577087 1.0808594926384816 0.9001372173925187 1.0271560913591757 0.9283445660383517 0.9685915154301113 0.9822880807677672 0.9635348418294646 0.8500267037302263 0.9789847514524221 1.042149571954461 1.0 15.499523451112175 -8.990428941168156 23.114002902702122 0.9907286999070173 0.9594337641280453 0.0834801783167215 0.059647533543527954 42.1877367583036 101890.12320904335 0.00953275315131344 0.009563467203522419 1.0222828118154299e-09 8.990428941168156 -0.03129493577897202 EKTPSPKEEDEEPES(ph)PPEKK ddPTM_A549_PD325901_60min_R1 5 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEKK;EKT(0.089)PS(0.067)PKEEDEEPES(0.845)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK 252.04 6.851499999999998e-98 2507285000.0 81856.2 86787.5 90372.8 89857.3 105541.3 98620.6 96685.9 100097.4 100073.0 100773.2 105392.5 True False 90166.18116465039 94101.38720575774 96506.04166379392 95407.5813402651 98128.443185719 97817.46653115563 100365.3348330547 98100.87883210885 95867.27982323179 94410.36295393799 92429.8906381029 0.9755089023926712 1.018083939687859 1.0440999226283916 1.0322156683471688 1.0616527024783362 1.0582882426437903 1.085853657730939 1.0613544834344766 1.0371891512734506 1.0214267516943125 1.0 16.49607185567005 -5.316082313165545 2.969327477458995 1.0333053623339064 0.9693726675937743 0.35251650936122403 0.024082459272766886 0.3866761057827502 5.173618863585099 0.004285653399184058 0.05448222585954314 4.829672550988867e-06 5.316082313165545 -0.06393269474013208 EKVAS(ph)DTEEADR ddPTM_A549_MK2206_60min_R1 3 EKVASDTEEADR 12 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.867)DT(0.133)EEADR;EKVAS(0.999)DT(0.001)EEADR;EKVAS(0.997)DT(0.003)EEADR 167.55 1.2411e-15 116088000.0 8816.9 9416.2 8425.5 8367.599999999999 11355.0 9384.5 8811.9 8490.5 12048.7 13258.099999999999 13598.9 True False 10304.977167491053 9895.444360157971 9620.362593294001 10417.66237563583 9684.694541877545 10377.561561073058 10412.908166918869 9694.054376065731 9319.68868782023 10263.086001849646 10221.91781945334 1.0081256129725131 0.9680614278981918 0.9411504536835037 1.0191494942181953 0.947443983891809 1.0152264716238975 1.0186843947328608 0.9483596471121073 0.9117358261366495 1.0040274421222561 1.0 13.319378277297048 -8.301472485420643 24.60117184953109 0.9564080931404639 0.9863291501162131 0.05978813923664594 0.03509636826925244 739.9477833384069 454711.7526688527 0.006545617241512602 0.007913345457372111 4.994908242773172e-09 8.301472485420643 0.029921056975749205 EKVAS(ph)DTEEADR ddPTM_A549_PD325901_60min_R1 3 EKVASDTEEADR 12 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.98)DT(0.02)EEADR;EKVAS(0.973)DT(0.027)EEADR;EKVAS(0.777)DT(0.223)EEADR 181.26 3.5396999999999996e-19 177662000.0 12056.400000000001 12614.5 11990.5 12953.3 13868.599999999999 13251.199999999999 12904.1 14528.2 13413.8 15296.5 14333.5 True False 13280.356852547413 13677.568185591597 12804.247434733903 13753.395921921257 12894.517380072639 13143.286620621355 13395.17258689447 14238.42365384759 12850.06463374603 14330.676379482971 12570.57036754274 1.0564641431734352 1.0880626563220337 1.0185892175421505 1.0940948198685223 1.0257702715993167 1.045560084891404 1.0655978364737417 1.1326792052818266 1.0222340162801957 1.1400179912667154 1.0 13.617762490545504 -8.97782265611398 24.103186669538317 1.0098090495541514 1.0647825959921735 0.0 0.049687074468146235 71.99806754610171 78251.57789540496 0.0052196665650606835 0.005363710468229639 1.0523915295297465e-09 8.97782265611398 0.0549735464380221 EKVAS(ph)DTEEADRTSSK ddPTM_A549_MK2206_60min_R1 4 EKVASDTEEADRTSSK 16 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.994)DT(0.006)EEADRTSSK;EKVAS(0.999)DT(0.001)EEADRTSSK;EKVAS(0.994)DT(0.005)EEADRTSSK;EKVAS(0.979)DT(0.02)EEADRTSSK 78.413 0.00012304 30736000.0 5414.7 7459.200000000001 6845.299999999999 5461.8 8076.200000000001 5629.5 4760.2 4521.5 9173.900000000001 10764.900000000001 11501.6 True False 6328.5689832950075 7838.841419180808 7816.066472004679 6799.941245189521 6888.201678477445 6225.209953440337 5625.066722973162 5162.436471513007 7096.026297707973 8333.10161345225 8645.435291988653 0.7320127639101545 0.9067029194521552 0.904068587413694 0.7865354392844429 0.7967443449447178 0.7200574341478175 0.6506400814989229 0.5971285767758635 0.8207829979692925 0.963872995634375 1.0 13.077722889106113 -10.00561604522281 1.0169734038826839 0.977441029549466 0.7708831496939254 0.44808346952631994 0.09060394693537357 0.3390820922483639 0.7083551762115221 0.036473806310006684 0.01940529530666799 9.87151829585778e-11 10.00561604522281 -0.20655787985554064 EKVAS(ph)DTEEADRTSSK ddPTM_A549_PD325901_60min_R1 2 EKVASDTEEADRTSSK 16 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.97)DT(0.03)EEADRTSSK;EKVAS(0.926)DT(0.074)EEADRTSSK 114.88 3.7659e-08 18574000.0 2973.2 3102.0 3534.5 3900.5 3902.0 5034.5 3973.8 4353.7 4752.0 4975.2 4650.8 True False 3275.0370752458416 3363.4164264699452 3774.3724246751167 4141.425026321776 3627.936981169223 4993.500701183155 4125.0251335467965 4266.862038088422 4552.289965525141 4661.065022927058 4078.781083850267 0.8029450485129467 0.8246131276295331 0.9253677378321574 1.0153584958799444 0.8894659719625212 1.2242629840946049 1.0113377130926764 1.0461120492548257 1.1160907810300753 1.1427593016409523 1.0 11.993922361608893 -6.028585264033725 0.9163857325132692 1.0587742758452459 0.7679749953824694 0.6121700029716164 0.07832938362082423 0.4576050409836025 0.540483460370547 0.011771005505060769 0.10126362659019758 9.362993803511902e-07 6.028585264033725 -0.2907992804627765 EKVASDT(ph)EEADR ddPTM_A549_MK2206_60min_R1 1 EKVASDTEEADR 12 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.127)DT(0.873)EEADR 124.43 2.4243000000000002e-06 98884000.0 2985.7 3342.6 3111.7 3164.2 3985.7 3356.0 3382.5 2747.9 4224.3 5087.6 4339.4 True False 3489.61316664338 3512.724062601052 3552.9858502822294 3939.4291420463355 3399.408809824865 3711.129692467496 3997.0564662108172 3137.4232400908086 3267.5027948209345 3938.307626508346 3261.807218652671 1.0698404083135258 1.0769257123822373 1.0892691112964774 1.207744320240227 1.0421856909216822 1.1377526149446757 1.225411619470831 0.9618665450702998 1.001746141260493 1.2074004876766173 1.0 11.671455802177073 -8.284321876697385 24.999183884427577 0.9979257521703584 1.1192794653549567 0.09165194995047166 0.08296346114394292 437.61414809986064 478093.2418861885 0.008508167594673917 0.010289733274539425 5.1961074507028895e-09 8.284321876697385 0.12135371318459831 EKVASDT(ph)EEADR ddPTM_A549_PD325901_60min_R1 1 EKVASDTEEADR 12 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.364)DT(0.636)EEADR 120.9 5.5701e-06 99309000.0 10224.0 9534.3 9710.9 10117.0 12915.0 11515.0 11421.0 13032.0 11423.0 12202.0 12945.0 True False 11261.93295348901 10337.788921628762 10369.940070385506 10741.90411262592 12007.894954331246 11421.225657786088 11855.632404811002 12772.066536593777 10942.931034552541 11431.56363759365 11352.847065116037 0.9919919548721501 0.910589992301909 0.9134219822487775 0.9461859259632445 1.0576989970408375 1.0060230347751409 1.0442871587022322 1.1250100052733543 0.9638931073225634 1.0069336415813692 1.0 13.470766521263748 -6.5963359117445375 9.721602916247674 1.004291896830859 0.9348557914602372 0.38503830797580807 0.047672112493606235 0.35354346141354787 43.91150042862844 0.007514299061361784 0.01565604280712125 2.5331685544029076e-07 6.5963359117445375 -0.06943610537062173 EKVASDT(ph)EEADRTSSK ddPTM_A549_PD325901_60min_R1 2 EKVASDTEEADRTSSK 16 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.396)DT(0.604)EEADRTSSK;EKVAS(0.297)DT(0.7)EEADRT(0.002)S(0.001)SK 105.67 2.9951e-07 29300900.0 5522.6 5946.9 6301.1 6290.2 7287.8 9245.2 7941.3 9245.3 9142.6 7845.1 9293.0 True False 6083.250286476755 6448.066133647362 6728.730537592413 6678.731367919305 6775.930069545119 9169.91015643629 8243.5105171461 9060.895238702456 8758.368316247926 7349.7590471468575 8150.01991318064 0.7464092543674161 0.7911718256318873 0.825609091667415 0.8194742392123618 0.8314004311310613 1.1251396013899586 1.0114712117223494 1.1117635705464597 1.0746437934566802 0.9018087226094308 1.0 12.992587868988853 -7.174889533692885 5.7275851509615 1.0459195495672353 0.8015525769663425 0.7896662150100333 0.06030299685973488 0.059453180492902366 3.1170434921478822 0.0068678137458388945 0.011983155689529295 6.685139378610483e-08 7.174889533692885 -0.2443669726008928 EKVELQHIS(ph)QK ddPTM_A549_PD325901_60min_R1 2 EKVELQHISQK 11 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 EKVELQHIS(1)QK;EKVELQHIS(1)QK 67.93 0.0018394000000000001 5647900.0 3138.0200000000004 2927.19 2923.46 3240.5 3776.35 3410.19 3177.55 2937.6000000000004 3617.7 3175.2 3372.5 True False 3456.589480311774 3173.8745742741985 3121.8635757931006 3440.658325290533 3511.112203700256 3382.4185432848917 3298.473404072079 2879.0072634973812 3465.660649890633 2974.717330116977 2957.703880038922 1.168673275117145 1.0730873349743288 1.0555024107930706 1.1632869498907563 1.1871074137597748 1.1435960733298225 1.1152142127320308 0.9733926654819465 1.1717402385275386 1.0057522493015194 1.0 11.530261904311905 -10.991323282839867 1.1622137787256792 0.99742095388635 1.1195825668776878 0.3467079308462747 0.06020882636489566 0.48187649898314416 1.1163213048011467 0.04899434182349318 0.010249298374458461 1.0201797931827414e-11 10.991323282839867 0.12216161299133776 EKVEPEVLSTDTQT(ph)SPEPGTR ddPTM_A549_MK2206_60min_R1 2 EKVEPEVLSTDTQTSPEPGTR 21 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 EKVEPEVLSTDTQT(0.974)S(0.026)PEPGTR;EKVEPEVLSTDT(0.015)QT(0.58)S(0.405)PEPGTR 206.0 1.3024e-56 32783000.0 2858.8 4238.4 3125.9 3373.0 4509.200000000001 3215.5 3254.1 3236.15 4397.2 4981.6 4628.1 True False 3341.2955490505074 4454.116456329894 3569.19962380603 4199.385151419722 3845.902653301121 3555.7620757238465 3845.3278482473347 3694.8841727937256 3401.241220885501 3856.253100128544 3478.8150409380182 0.9604694442592641 1.2803544896508492 1.0259814281024957 1.2071309057831978 1.1055208765178048 1.022118748447483 1.1053556463900107 1.0621099797813474 0.9777010794941257 1.1084961559464668 1.0 11.764380261517296 -8.201276977458575 0.9285821271174092 0.9882498830500684 1.1196433816806621 0.050797647326583095 0.09106151507809221 0.42553585426298746 0.7252354840386985 0.015261134072190787 0.020972872598679825 6.291048343671812e-09 8.201276977458575 0.13139349863059369 EKVEPEVLSTDTQT(ph)SPEPGTR ddPTM_A549_PD325901_60min_R1 2 EKVEPEVLSTDTQTSPEPGTR 21 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 EKVEPEVLSTDTQT(0.659)S(0.341)PEPGTR;EKVEPEVLSTDTQT(0.929)S(0.071)PEPGTR 225.35 4.0826e-76 128060000.0 11056.5 11353.7 11543.5 11637.7 12641.3 11833.099999999999 11457.7 12924.2 13375.6 13678.4 13956.0 True False 12178.94774063489 12310.516144813619 12326.911326704541 12356.53429786565 11753.418698117493 11736.735156851795 11893.729043394018 12666.416692161232 12813.470046901952 12814.743489629649 12239.500474373071 0.9950526793258462 1.005802170651428 1.007141700963572 1.0095619771197053 0.9602858158081427 0.9589227257620554 0.9717495471565178 1.0348801994560182 1.0468948527540525 1.046998896438708 1.0 13.579257058670649 -8.265541853449756 24.997358350549714 1.0237186989302451 0.987202470642549 0.5047465129057872 0.02096403025647598 327.6632994413549 1996522.0584610326 0.004116157944494532 0.005069643800516932 5.42572960440356e-09 8.265541853449756 -0.036516228287696184 EKVESELR ddPTM_A549_MK2206_60min_R1 2 EKVESELR 8 1 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 ; 91.584 0.0026344999999999997 17458600.0 5414.2 5906.0 5362.4 4882.5 6851.1 5025.700000000001 4995.4 5636.5 7366.6 7070.4 6543.6 False True 6327.984595518838 6206.590173434402 6122.868953804488 6078.712719183755 5843.312265597293 5557.516238210335 5902.99951849505 6435.491136057298 5698.076862042923 5473.191729393937 4918.643525827448 1.2865304351272948 1.2618499675457344 1.2448287666414 1.2358514471042406 1.1879926314876195 1.129887988228505 1.2001275326213048 1.3083873840958369 1.158465099599661 1.1127441337544783 1.0 12.264044785513812 -13.664850937697896 0.1557228601921313 0.44149259526471857 1.296678711413728 0.5051090977312755 0.060092826674307126 13.996673785254591 0.20767493614926968 2.5344311245789912 0.09894757390936096 2.163460958058346e-14 13.664850937697896 0.8551861161490093 EKVESELR ddPTM_A549_PD325901_60min_R1 1 EKVESELR 8 1 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 74.84100000000001 0.0050034 10665000.0 4376.6 4423.9 4209.0 4359.8 4833.6 4291.0 4581.1 4921.6 5073.6 5113.0 5189.2 False True 4820.909210117369 4796.7175786784 4494.648050773111 4629.094944175794 4494.104611014749 4256.055518676515 4755.436267374107 4823.4348270794935 4860.374235919265 4790.164307409963 4550.961297049065 1.0593166795866498 1.0540009605857752 0.9876260766461651 1.0171686028570255 0.9875066645653121 0.9351992339368447 1.044930061360361 1.059871642988286 1.0679884795045014 1.0525609854155433 1.0 12.151955601842106 EKVIET(ph)PENDFK ddPTM_A549_MK2206_60min_R1 4 EKVIETPENDFK 12 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK 127.3 3.7631e-08 117122200.0 19113.6 19034.9 19254.8 17484.0 22787.899999999998 18243.299999999996 16379.199999999999 18271.6 25305.4 26619.8 26919.600000000002 True False 22339.508397345653 20003.695105368522 21985.420172257713 21767.580784886584 19435.830096948583 20173.79389707753 19355.088624201093 20861.6552544282 19573.76730442008 20606.368691745985 20234.72037683607 1.104018636349384 0.988582729725684 1.0865195941835586 1.0757539703788184 0.9605188376706195 0.9969890130120954 0.9565285936126923 1.0309831253368749 0.9673356952749085 1.0183668619080777 1.0 14.30454529212292 -6.757268851256207 24.999990664166614 0.98522311367296 1.0599805167430194 0.5051890434248099 0.03476289400632419 59.432658519654886 356260.7706047668 0.004431157596414724 0.008971653136103113 1.7487637761912746e-07 6.757268851256207 0.0747574030700594 EKVIET(ph)PENDFK ddPTM_A549_PD325901_60min_R1 3 EKVIETPENDFK 12 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK 129.05 3.2642999999999997e-08 191229000.0 15968.3 14766.4 17181.7 15866.5 18681.0 15721.2 16486.3 16432.3 16527.7 15527.400000000001 18573.5 True False 17589.390060758855 16010.81635068531 18347.75348395542 16846.537669564023 17368.91100595137 15593.171759547256 17113.695168149512 16104.544885610021 15833.09824562496 14546.997314077345 16289.077247117239 1.07982728511351 0.9829173321354853 1.1263838464025038 1.0342229589797938 1.0662918925640945 0.9572777833260543 1.0506239800157011 0.9886714048495365 0.9720070698557848 0.8930522640041997 1.0 13.991617259121048 -7.2489136297770225 24.907111230926095 0.9901071279497637 1.0562474521689016 0.3927790427269421 0.048641212964034584 534.6187401374622 1063074.9618151868 0.005304597537411355 0.009146801579600898 5.637497602922195e-08 7.2489136297770225 0.06614032421913785 ELAAVPPELT(ph)GSRQSFQK ddPTM_A549_PD325901_60min_R1 1 ELAAVPPELTGSRQSFQK 18 1 A0A087WWA7;O14640-2;O14640;P54792-2;P54792 A0A087WWA7 DVL1;DVL1P1 Segment polarity protein dishevelled homolog DVL-1;Putative segment polarity protein dishevelled homolog DVL1P1 1 ELAAVPPELT(0.475)GS(0.475)RQS(0.049)FQK 71.535 0.00037956 3003300.0 1446.4 1585.5 1796.7 1925.9 2319.5 2708.7 1836.1 2277.0 2110.0 1750.5 2092.0 True False 1593.2374632165984 1719.115649312733 1918.6348664347952 2044.858468963751 2156.5863218405975 2686.6412452666223 1905.973790252473 2231.5834487280563 2021.3240377226523 1639.9731312578017 1834.6972622806306 0.8683925658863826 0.9370023516445306 1.045750111410656 1.114548166067397 1.1754453261459827 1.4643512586523282 1.0388492038644248 1.2163224389151124 1.1017207466751404 0.8938657973573384 1.0 10.841326312723217 -5.739733905954499 2.1640587169481944 1.1025432626586493 0.8735470169097419 0.2737006322930493 0.13745959612797265 0.36870530200660107 3.2064074197425625 0.019143696414356044 0.11182884766545105 1.8208161385704192e-06 5.739733905954499 -0.22899624574890742 ELAEAAKEPLPVEQDDDIEVIVDET(ph)S(ph)DHTEETSPVR ddPTM_A549_PD325901_60min_R1 1 ELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVR 36 1 C9JAY7;C9JK97;C9J1B2;E7EVC7;Q676U5-4;Q676U5-5;Q676U5-3;Q676U5-2;Q676U5 C9JAY7 ATG16L1 Autophagy-related protein 16-1 2 ELAEAAKEPLPVEQDDDIEVIVDET(0.4)S(0.4)DHT(0.4)EET(0.4)S(0.4)PVR 45.856 0.059095 2361700.0 567.78 376.11 403.5 579.46 233.31 653.06 478.14 375.36 469.69 347.07 520.94 True False 625.4206076224555 407.8061096581597 430.88393644261157 615.2519281508565 216.923110475805 647.7416958813528 496.3358793482473 367.87315033577653 449.95056269097256 325.15594096866323 456.86768251074153 1.3689316000322502 0.8926131684715337 0.9431263206770616 1.3466742159780392 0.47480511049433854 1.4177883896747798 1.08638868177457 0.8052072064150158 0.9848596867658584 0.7117070290061902 1.0 8.835632583884927 ELAEAAKEPLPVEQDDDIEVIVDET(ph)SDHTEETSPVR ddPTM_A549_PD325901_60min_R1 1 ELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVR 36 1 C9JAY7;C9JK97;C9J1B2;E7EVC7;Q676U5-4;Q676U5-5;Q676U5-3;Q676U5-2;Q676U5 C9JAY7 ATG16L1 Autophagy-related protein 16-1 1 ELAEAAKEPLPVEQDDDIEVIVDET(0.213)S(0.213)DHT(0.191)EET(0.191)S(0.191)PVR 47.006 0.0040606 2392200.0 181.57 293.7 376.97 397.9 290.04 401.77 264.52 530.31 486.54 489.01 490.34 True False 200.00285273523068 318.45112974023976 402.55345110476134 422.4773793035344 269.66859098368053 398.49811832641893 274.58645335089807 519.7325510298533 466.0924157884263 458.1338251450312 430.03128852135967 0.46508907159506957 0.7405301387143653 0.9361027019427366 0.9824340474298998 0.6270906284771093 0.9266723816693294 0.6385266855699021 1.2085924092103317 1.0838569848976827 1.0653499812078806 1.0 8.748297822036916 -8.259151880746643 24.999456733270147 1.053380073593544 0.7754679570229894 0.5116481380268958 0.15310073288411774 145.54705143321425 1590645.0219993885 0.02429492945590004 0.030606738559039375 5.506151025292003e-09 8.259151880746643 -0.2779121165705545 ELAEDDSILK ddPTM_A549_PD325901_60min_R1 2 ELAEDDSILK 10 0 P56385 P56385 ATP5I ATP synthase subunit e, mitochondrial 0 ; 150.08 7.839400000000001e-08 3991300.0 3345.8999999999996 3406.2 3018.3 3177.7 4005.7 3713.5 3713.0 3501.0 3523.7 3639.8 3726.2 False True 3685.573304878605 3693.2524280599405 3223.1399885123506 3373.979311919681 3724.3534509148008 3683.258487207002 3854.30024683156 3431.169808518633 3375.6111429968314 3409.9824068278444 3267.901022327954 1.127810566996033 1.1301604310613358 0.9863028183810424 1.0324606800716871 1.139677556164686 1.1271022170014073 1.1794421619556497 1.0499613620716002 1.0329600315104244 1.0434778726556033 1.0 11.674148572686972 -8.540632023277423 4.410580166400457 1.016140305430067 1.1004194928459572 0.308310981972409 0.05155760842990304 0.17592147290713503 8.323429446496872 0.00925055338687113 0.010724111386657445 2.879837460993666e-09 8.540632023277423 0.08427918741589013 ELAEDGYS(ph)GVEVR ddPTM_A549_MK2206_60min_R1 2 ELAEDGYSGVEVR 13 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 RPS3 40S ribosomal protein S3 1 ELAEDGYS(1)GVEVR;ELAEDGYS(1)GVEVR 138.42 9.046799999999999e-09 3347500.0 1138.71 1192.82 1288.31 1120.09 1712.3999999999999 1048.52 1030.8799999999999 921.31 1744.0300000000002 1595.53 1750.62 True False 1330.8964092134127 1253.5294430538463 1471.011730172286 1394.5121002827505 1460.5082284025632 1159.4736904487536 1218.1775520731428 1051.9085138935427 1349.0099896436238 1235.0986648562903 1315.8927393459337 1.0114018942569258 0.9526076142626296 1.1178811814885872 1.0597460253302216 1.1098991465888859 0.8811308519150821 0.925742285559414 0.7993877330886371 1.025167135061594 0.9386013220729509 1.0 10.361826182002511 -7.240854695665204 24.98589162807575 0.9791025156610705 1.0491579038632601 0.2690102973502052 0.07874824366092555 1345.268970919473 1632901.1056547507 0.012686808628091722 0.021957300964690042 5.7430857970153266e-08 7.240854695665204 0.0700553882021896 ELAEDGYS(ph)GVEVR ddPTM_A549_PD325901_60min_R1 2 ELAEDGYSGVEVR 13 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 RPS3 40S ribosomal protein S3 1 ELAEDGYS(1)GVEVR;ELAEDGYS(1)GVEVR 121.45 8.9637e-06 3958000.0 1460.6 1462.88 1352.98 1438.17 1723.46 1463.19 1561.53 2009.4299999999998 1685.9499999999998 1621.72 1831.73 True False 1608.879036763111 1586.162031577806 1444.8013589296752 1527.0024945789496 1602.4101152142264 1451.2742657590986 1620.9548786520036 1969.350342282659 1615.095384549055 1519.3243224355342 1606.438822293164 1.0015190211018827 0.9873778008636436 0.8993815007951849 0.9505512898394596 0.9974921503246623 0.9034108523892801 1.0090361712860736 1.22591057620946 1.0053886659957172 0.9457716667147801 1.0 10.64965032463428 -7.976976434308632 23.481264411440897 1.024039864225853 0.9569352694959814 0.22567052968820367 0.07297624226531567 165.0316918159805 168311.32135161455 0.01126671256824505 0.01556650301272316 1.0544441110954836e-08 7.976976434308632 -0.06710459472987162 ELAEDGYSGVEVR ddPTM_A549_MK2206_60min_R1 2 ELAEDGYSGVEVR 13 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 RPS3 40S ribosomal protein S3 0 ; 170.52 3.183e-21 12047400.0 4742.1 5234.1 4293.8 4093.2 6780.799999999999 5452.5 5027.8 4894.5 7532.6 7189.4 6901.299999999999 False True 5542.450546786203 5500.493333351335 4902.7254053867155 5096.034183750728 5783.353302471447 6029.479930923421 5941.286179102662 5588.310363777603 5826.478127090447 5565.3095467448475 5187.516743809673 1.0684207532245706 1.0603326418011356 0.9451006420822058 0.9823648646208009 1.1148596887658806 1.1623056326745302 1.145304482379256 1.0772611713391 1.1231728811368664 1.0728272932103784 1.0 12.34082837262052 -6.758334615385214 24.999218028797788 1.078868770674654 1.0124349990390198 0.3290815847121519 0.053733101306148764 114.30818899612237 920380.0791134594 0.009866450653602567 0.01987181802519933 1.7444775492354007e-07 6.758334615385214 -0.06643377163563424 ELALGSNK ddPTM_A549_PD325901_60min_R1 1 ELALGSNK 8 0 P13489;H0YCR7 P13489 RNH1 Ribonuclease inhibitor 0 66.435 0.0090869 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ELAPAWEDT(ph)SPEQDNR ddPTM_A549_MK2206_60min_R1 1 ELAPAWEDTSPEQDNR 16 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 ELAPAWEDT(0.5)S(0.5)PEQDNR 79.00399999999999 0.00037019 2974700.0 946.81 939.43 935.43 786.88 1150.5 1036.7 1221.3 933.86 1246.3 1149.7 1423.5 True False 1106.6083807179618 987.2429743700441 1068.0880399554924 979.6656353243859 981.2629740581341 1146.4029058942344 1443.1944012367383 1066.237514826305 964.0150399321391 889.9819714986716 1070.0056633986455 1.0342079659681946 0.9226521018910092 0.9982078380435275 0.9155705140968005 0.9170633461334783 1.07139891414493 1.348772675326538 0.996478384459787 0.9009438668484709 0.8317544494781766 1.0 10.063402717303012 -4.857673657066304 16.67751243815737 0.9838146778234775 12.947511298301372 0.007191948703208606 0.12945290010564522 633.658189520531 74268.46132217676 0.017167436190408333 67.90263843061888 1.3877982737113467e-05 4.857673657066304 11.963696620477894 ELAPEPWVERAT(ph)PT ddPTM_A549_MK2206_60min_R1 2 ELAPEPWVERATPT 14 1 Q9BTY7 Q9BTY7 HGH1 Protein HGH1 homolog 1 ELAPEPWVERAT(0.924)PT(0.076);ELAPEPWVERAT(0.992)PT(0.008) 108.17 6.0626000000000005e-05 16899300.0 1547.24 1647.38 1542.6599999999999 1211.0 2197.01 1439.37 1562.73 1558.3600000000001 2353.8999999999996 2547.2 2491.5299999999997 True False 1808.3762856138608 1731.2246054711081 1761.4323848045703 1507.6950543638563 1873.8327393615496 1591.6831780235223 1846.6578126952345 1779.2623022773437 1820.7454084058895 1971.785750892769 1872.8143382701978 0.9655929307355398 0.924397346866819 0.9405269645850192 0.8050424559203346 1.0005437811269067 0.8498883981706703 0.9860335725541687 0.9500473516882285 0.9721974950744978 1.0528463556691823 1.0 10.870992169542957 -8.436160950001808 0.8845407692840667 0.9908445161312861 0.9159505993653942 0.30488658375440014 0.055898011219589636 0.4911811454094583 0.7606599853342889 0.010553843149095257 0.012922568471018577 3.6630179764989694e-09 8.436160950001808 -0.07489391676589185 ELAPEPWVERAT(ph)PT ddPTM_A549_PD325901_60min_R1 2 ELAPEPWVERATPT 14 1 Q9BTY7 Q9BTY7 HGH1 Protein HGH1 homolog 1 ELAPEPWVERAT(0.5)PT(0.5);ELAPEPWVERAT(0.5)PT(0.5) 114.54 1.6422e-05 26372000.0 8475.8 8138.700000000001 7684.6 8475.4 8290.8 8702.6 8129.5 7796.1 9241.2 8694.099999999999 10067.8 True False 9336.256976445826 8824.576811770132 8206.123167253761 8998.906208970024 7708.482809707274 8631.728910937838 8438.872571133097 7640.600669577869 8852.82450113866 8145.15304225561 8829.524425042508 1.0573906959208483 0.9994396512162826 0.9293958283845231 1.0191835681939008 0.873034881453444 0.9775983954986661 0.9557561840135541 0.8653467957920151 1.0026388823423003 0.9224905725561088 1.0 13.10812001833311 -8.907548048203548 20.928947298941484 1.0012714351736898 0.9579325367054863 0.0 0.05920959071544614 8.242556173702472 1857.5686608295998 0.00904724097389819 0.009631412947825466 1.2372343008506926e-09 8.907548048203548 -0.04333889846820349 ELAQIAGRPT(ph)EDEDEKEK ddPTM_A549_PD325901_60min_R1 2 ELAQIAGRPTEDEDEKEK 18 2 O15355 O15355 PPM1G Protein phosphatase 1G 1 ELAQIAGRPT(1)EDEDEKEK;ELAQIAGRPT(1)EDEDEKEK 121.38 9.2634e-11 86033000.0 11806.4 12554.5 13494.3 11972.1 15896.0 13022.599999999999 13017.0 13716.3 11913.400000000001 13620.9 14069.8 True False 13004.977036587692 13612.51177502158 14410.10434581792 12711.589426388144 14779.519798222947 12916.54826322927 13512.369058175715 13442.717636270812 11412.721227964475 12760.874049442658 12339.303795810712 1.053947390532923 1.1031831293142431 1.167821506324389 1.0301707160094256 1.1977596177865972 1.0467809591992163 1.095067378336472 1.0894226982915127 0.9249080350740032 1.034164833009061 1.0 13.590973377062221 -8.720736504885968 8.802141446722722 0.9645648712810714 1.0999638583720504 0.4475257992867122 0.05376386127666769 0.13884672823816926 27.723350572258795 0.008383119692166641 0.009478275064024865 1.9022320519611863e-09 8.720736504885968 0.13539898709097897 ELAQTTR ddPTM_A549_PD325901_60min_R1 1 ELAQTTR 7 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 76.47800000000001 0.048921 4006900.0 2462.3 1884.2 1997.2 2328.9 2014.8 2136.0 2344.1 2487.8 2509.7 2081.6 2895.2 False True 2712.2708833505444 2042.9881466004745 2132.7420021392386 2472.750863684344 1873.2873986826626 2118.605124188544 2433.306008240738 2438.1788773586554 2404.226036716844 1950.1674207519206 2539.1087541849324 1.068197996198551 0.8046083663148508 0.8399569331656533 0.9738656761388349 0.7377735969737924 0.8343892795835078 0.9583307545335301 0.9602498803330399 0.9468779282314017 0.7680519463916916 1.0 11.31010647396145 -7.850578205597336 6.185637244328359 0.9723634805702278 0.869858070450241 0.0 0.10330618465114709 0.2141071231269459 12.15935611767428 0.012333766719871228 0.017141142719757807 1.4106581892514576e-08 7.850578205597336 -0.10250541011998682 ELASALK ddPTM_A549_PD325901_60min_R1 2 ELASALK 7 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 127.84 0.015995 81846000.0 24905.0 24631.0 24790.0 24940.0 30542.0 28298.0 27460.0 29270.0 29448.0 28569.0 28868.0 False True 27433.337265908016 26706.740812502023 26472.398474380014 26480.487157150397 28396.835284179993 28067.550470172013 28505.005326688584 28686.186888129207 28210.40296817852 26765.14846438396 25317.419009329464 1.0835755910110283 1.0548761231411699 1.0456199529906638 1.045939443803191 1.1216323146413845 1.1086260593873778 1.1259048687460793 1.1330612681157726 1.1142685183581704 1.0571831376066023 1.0 14.627842715901988 -10.784333532219094 1.0610894574287102 1.0006296457548831 1.0931329313693015 0.2974512470096442 0.03441663295634947 0.3454018996712729 0.6977788847535362 0.023331620479456687 0.006038144020288768 1.6431093530371044e-11 10.784333532219094 0.09250328561441834 ELDDDERDVDAS(ph)PTAGLQEAATLAPTR ddPTM_A549_MK2206_60min_R1 2 ELDDDERDVDASPTAGLQEAATLAPTR 27 1 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 ELDDDERDVDAS(0.862)PT(0.137)AGLQEAAT(0.001)LAPTR;ELDDDERDVDAS(0.957)PT(0.042)AGLQEAATLAPTR 70.268 4.8755e-05 4618100.0 2100.07 2557.7 2518.6 2073.39 3044.4 2100.9 1862.91 2245.7 3905.8 3796.5 3620.1 True False 2454.510474218029 2687.8760051800127 2875.7753519043704 2581.370643078012 2596.5727928922934 2323.215843535446 2201.3766331023767 2564.0348521678116 3021.142536280948 2938.868013216238 2721.12926032275 0.9020190661309865 0.9877796120795845 1.0568315860023783 0.9486394787331194 0.9542261849715721 0.8537690132588159 0.8089937751951093 0.942268671155921 1.1102532247669168 1.0800177911679443 1.0 11.40998977443503 -8.686464969757116 8.177729323038072 1.0519850801938149 0.9320755589869969 0.4353286320782376 0.06644367799267885 0.21928116565996486 21.23837800894237 0.013055402856761777 0.014792930609269445 2.0584249166367577e-09 8.686464969757116 -0.11990952120681797 ELDDDERDVDAS(ph)PTAGLQEAATLAPTR ddPTM_A549_PD325901_60min_R1 2 ELDDDERDVDASPTAGLQEAATLAPTR 27 1 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 ELDDDERDVDAS(0.942)PT(0.058)AGLQEAATLAPTR;ELDDDERDVDAS(0.955)PT(0.045)AGLQEAATLAPTR 86.936 3.1374000000000004e-09 8803600.0 3061.3 3003.5 2541.1 2967.8 3808.6 3360.0 3419.0 2828.6000000000004 3053.8 3553.2 4429.2 True False 3372.0809223900537 3256.6154857841684 2713.5543268756383 3151.1142656371685 3541.0970749567155 3332.6372740044512 3549.1119159485884 2772.1813540062285 2925.459405875564 3328.850345607095 3884.4364790121235 0.8681004157513292 0.8383752710025985 0.6985709102303921 0.8112152902133565 0.9116115282331184 0.8579461376214849 0.9136748496531436 0.7136637113219676 0.7531232449499488 0.8569712398678937 1.0 11.923489604555677 -10.884162064020812 1.1387266105681488 0.9998078456494721 0.8141725204482751 0.1436852978632458 0.07983414394251913 0.349116738965335 0.8052958221603612 0.05079759650445281 0.01226904453124848 1.3056835602398189e-11 10.884162064020812 -0.18563532520119697 ELDEEGS(ph)DPPLPGR ddPTM_A549_MK2206_60min_R1 2 ELDEEGSDPPLPGR 14 0 C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR 299.04 4.293599999999999e-117 97504000.0 15672.6 16776.4 15184.900000000001 14002.8 21820.0 16836.0 14497.3 15713.900000000001 23037.0 25573.0 22081.0 True False 18317.75172171855 17630.247102201964 17338.34715363005 17433.486628609568 18610.306904779223 18617.574345167675 17131.27175390926 17941.393446800463 17819.156282529624 19796.04153878016 16597.678295402515 1.1036333754457988 1.0622116411959537 1.0446248472253312 1.0503569425995303 1.1212596468949636 1.1216975057484193 1.0321486806172493 1.0809580187953245 1.0735933041590193 1.1926994358158862 1.0 14.01869382919603 -10.597815652000515 0.605638192027723 0.9914789630353414 1.0775526531179316 0.0 0.0639506438499651 0.7050598349596162 0.39563345146641604 0.032508301832893494 0.006261111388878574 2.524552159289655e-11 10.597815652000515 0.08607369008259014 ELDEEGS(ph)DPPLPGR ddPTM_A549_PD325901_60min_R1 2 ELDEEGSDPPLPGR 14 0 C9JQV0;Q9BRJ6;H7C0T1;H7C2R9 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR 305.51 1.2693999999999997e-135 138513000.0 19202.1 17330.800000000003 18011.699999999997 18787.9 21790.0 18379.9 19045.9 20291.0 19273.9 22088.0 21802.0 True False 21151.483056161105 18791.3273384479 19234.082275150875 19948.38591258324 20259.545571419105 18230.22018823642 19770.702146816384 19886.28008701843 18463.88500979271 20693.359910438325 19120.492214264967 1.1062206359092004 0.9827847069976844 1.0059407498307582 1.0432987649606957 1.059572386756045 0.953438854185754 1.0340059202067153 1.0400506359445152 0.9656595030549271 1.0822608371451814 1.0 14.22283204230006 -7.925441022659391 0.7154025830770342 0.9854568231736169 1.03283880469248 0.0 0.049228784231319614 0.8072185526325399 0.8385044809692249 0.008633134068944918 0.014611030957991687 1.1872959252928374e-08 7.925441022659391 0.04738198151886297 ELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 ELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGTPR 43 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 ELDEHELDY(0.001)DEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGT(0.999)PR;ELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGT(1)PR 47.563 0.0035589 26425000.0 166.5 651.74 411.11 217.6 590.53 377.82 290.99 119.48 620.01 368.05 295.88 True False 194.60112946582808 684.9107821933852 469.4115798147402 270.91200976843527 503.663819270361 417.8006616233815 343.85911636443035 136.41665589215404 479.5787249525198 284.9072493781736 222.40483012742604 0.8749860754118158 3.0795679293519305 2.110617739487908 1.2181030853206616 2.264626262756023 1.8785592983030275 1.5460955419332283 0.6133709228077223 2.156332327304883 1.2810299543177055 1.0 7.797044310233694 -7.754580207398845 4.717172154370893 1.4736045216256386 1.956455644025708 0.15001750880991416 0.6442809982774663 0.362155086827973 20.493745481855065 0.10586067548495802 0.15367621171909648 1.7596236588198234e-08 7.754580207398845 0.48285112240006933 ELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGT(ph)PR ddPTM_A549_PD325901_60min_R1 1 ELDEHELDYDEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGTPR 43 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 ELDEHELDY(0.001)DEEVPEEPAPAVQEDEAEKAGAEDDEEKGEGT(0.999)PR 48.653 0.0032542 10112000.0 188.07 205.83 225.14 173.4 140.49 374.25 276.38 153.75 209.17 187.28 283.25 True False 207.16272795018355 223.17601646044784 240.41935427680178 184.1105241800272 130.6224670641886 371.2022320821919 286.8977921409392 150.68333563545835 200.37931230826877 175.45510883859524 248.4120456696884 0.8339479971339483 0.8984106058898741 0.9678248638412871 0.7411497445048922 0.5258298433638613 1.4943004518217957 1.154927054231601 0.606586267703865 0.8066408847770272 0.7063067669105569 1.0 7.95659132229679 -11.10791649150566 1.4995607067654158 0.9991080122979703 0.8844251367629286 0.0 0.2645825625009325 1.5763980357768694 6.419607042859009 0.17541627680573169 0.039461091628624545 7.799800748965885e-12 11.10791649150566 -0.11468287553504175 ELDFSS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 ELDFSSPGR 9 0 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3;H0YG44;H7C288;H7BZB4 Q4AC94 C2CD3 C2 domain-containing protein 3 1 ELDFS(0.02)S(0.98)PGR 129.28 5.0476e-05 4040700.0 837.04 956.49 833.79 798.63 1216.5 888.99 880.61 973.05 1395.1 1226.6 1126.0 True False 978.3118883367965 1005.1712555008924 952.0339596062671 994.2943858518628 1037.5544614878056 983.062331736197 1040.6054381995284 1110.9828173406472 1079.1120775169109 949.5102080893022 846.3831239809443 1.1558735761830035 1.1876078657772517 1.1248262549569708 1.1747568656322223 1.2258685601004082 1.1614862157368935 1.2294732830979234 1.312624018441157 1.2749688018841054 1.1218444474924096 1.0 9.725167051640975 -10.866630038146608 1.136738991406415 1.0010041120530513 1.2094067686357832 0.40430709674940335 0.06200127759392652 0.24972820761475256 0.5773439347252969 0.040421966682506624 0.009994969026969027 1.359471044217829e-11 10.866630038146608 0.20840265658273194 ELDFSS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 ELDFSSPGR 9 0 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3;H0YG44;H7C288;H7BZB4 Q4AC94 C2CD3 C2 domain-containing protein 3 1 ELDFS(0.037)S(0.963)PGR;ELDFS(0.018)S(0.982)PGR 123.86 9.475899999999999e-05 12061300.0 2955.4 2676.2 2698.8 2987.8 2981.7 2549.5 3201.4 2776.7 2998.8 3146.5 3250.0 True False 3255.430032349512 2901.7327661247177 2881.9567972027744 3172.3496202138726 2772.2756783065793 2528.73771728403 3323.231028873298 2721.3165402209897 2872.7708646079086 2947.8294530149506 2850.270603447442 1.1421477064009375 1.018055184870879 1.0111169071866395 1.1129994521842492 0.9726359577765961 0.8871921543959673 1.1659352711471687 0.9547572560056296 1.0078940789457858 1.0342279253939992 1.0 11.476883179279454 -2.000000158457805 0.9911309101232036 1.0069656229847601 122.92562325330253 0.19323963534578548 0.0712141352287679 1718.5787668949447 2.2916572808506244 0.009627970442261415 475841.71080841054 0.009999996351374867 2.000000158457805 121.91865763031777 ELDGERER ddPTM_A549_MK2206_60min_R1 2 ELDGERER 8 1 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YGX3;A0A590UJB9;A0A590UK79;A0A5F9UKJ4 P67936 TPM4 Tropomyosin alpha-4 chain 0 ; 60.59 0.011353 5008300.0 1141.82 1143.02 984.5899999999999 1161.8 1199.65 766.52 870.11 875.57 1466.97 1641.02 1507.46 False True 1334.531301181212 1201.1948357668448 1124.219667168872 1446.4410521551831 1023.183074166746 847.632637625204 1028.1977241137308 999.6847288206667 1134.7036372697173 1270.3124422621129 1133.1160782205275 1.17775338893522 1.0600810092230177 0.9921487204862307 1.2765162192621153 0.902981692549608 0.748054549677158 0.9074072320361362 0.8822438830720639 1.0014010559727322 1.121078825619562 1.0 10.146079945374886 -6.7919502571159125 24.999993724035413 0.9593266606043129 1.1122665304851505 0.3923743040205777 0.11055833662320956 184.04401837668243 150801.4611050597 0.015631626421057813 0.029543441349590242 1.614543471562737e-07 6.7919502571159125 0.15293986988083752 ELDGERER ddPTM_A549_PD325901_60min_R1 2 ELDGERER 8 1 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YGX3;A0A590UJB9;A0A590UK79;A0A5F9UKJ4 P67936 TPM4 Tropomyosin alpha-4 chain 0 ; 81.296 0.0037890000000000003 6846900.0 1133.52 1142.22 1247.89 1707.62 1686.21 1831.83 1363.21 1598.08 1486.4299999999998 1378.9 1683.23 False True 1248.5941159466797 1238.478888021439 1332.579319572169 1813.0958091135985 1567.7764267087025 1816.9121838213018 1415.0877025271343 1566.205040730492 1423.9605162995654 1291.8360186754535 1476.2033808741032 0.8458144264697122 0.8389622351955998 0.9027071315763481 1.228215456355351 1.0620328113463446 1.2308007198475965 0.9585994185226832 1.060968333376324 0.96460998176037 0.8751070722453701 1.0 10.527675784085545 -6.014693038124823 24.507245426638324 1.0246233427281226 0.8494998552860838 0.38220748410777083 0.10345227107037562 412.35375249231805 687789.6691242635 0.013788082223818759 0.03804821807426165 9.667339307548438e-07 6.014693038124823 -0.17512348744203876 ELDPDDS(ph)HLNLDETTK ddPTM_A549_MK2206_60min_R1 1 ELDPDDSHLNLDETTK 16 0 Q9H8M2;Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 ELDPDDS(1)HLNLDETTK 92.31 2.6931e-06 2323900.0 720.96 1004.2 641.53 899.7 882.64 767.8 744.65 828.89 1422.0 1020.0 1420.3 True False 842.6404222203206 1055.3094907150062 732.5086006143131 1120.1265403890682 752.8048252261376 849.0480863756088 879.9432660942751 946.387695869163 1099.9192704673849 789.5812915792345 1067.6003117141524 0.7892845412037831 0.9884874321744886 0.6861262520972742 1.0492002747644191 0.7051373224286763 0.7952864729051704 0.8242253738961796 0.8864625510923944 1.0302725265238455 0.7395851077557976 1.0 10.060155916487647 -8.640664766632808 3.8063436455995747 1.0143772223548437 0.8369581187899544 0.0 0.13093633753041767 0.15862296933128486 4.359311493996043 0.01578540192070377 0.017866324958467975 2.2873637458524608e-09 8.640664766632808 -0.17741910356488932 ELDPSLVSANDS(ph)PSGMQTR ddPTM_A549_MK2206_60min_R1 5 ELDPSLVSANDSPSGMQTR 19 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ELDPSLVS(0.056)ANDS(0.872)PS(0.059)GMQT(0.013)R;ELDPSLVSANDS(0.891)PS(0.109)GMQTR;ELDPSLVSANDS(0.87)PS(0.128)GMQT(0.001)R;ELDPSLVS(0.02)ANDS(0.966)PS(0.013)GMQTR;ELDPSLVSANDS(0.99)PS(0.01)GMQTR 195.96 2.0299e-54 124375900.0 6909.33 7548.02 6457.849999999999 6311.74 9054.12 7390.9000000000015 7497.2699999999995 7441.639999999999 10835.43 10232.36 11553.0 True False 8075.455987099875 7932.181977799923 7373.670235962686 7858.116583344772 7722.27094192024 8173.00013231764 8859.426912765222 8496.515259066693 8381.222405626168 7920.862769317346 8684.07125342082 0.9299159059662022 0.9134174221192953 0.8491029173739285 0.9048885429457193 0.889245460633259 0.9411484422238177 1.0201927937055246 0.9784022967015333 0.9651259370222977 0.9121139772082326 1.0 13.084155848078886 -7.496902012606706 4.0982151619430285 0.9851729455965783 0.8966526072837385 0.5678344088599648 0.03175998530983329 0.08161757614711204 3.084698308540799 0.003723400563077518 0.005879368169183239 3.184916035152369e-08 7.496902012606706 -0.08852033831283979 ELDPSLVSANDS(ph)PSGMQTR ddPTM_A549_PD325901_60min_R1 4 ELDPSLVSANDSPSGMQTR 19 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ELDPSLVS(0.001)ANDS(0.686)PS(0.314)GMQTR;ELDPSLVS(0.004)ANDS(0.803)PS(0.193)GMQTR;ELDPSLVSANDS(0.999)PS(0.001)GMQTR;ELDPSLVSANDS(1)PSGMQTR 357.28 1.0312999999999993e-255 207973000.0 20879.0 22025.2 22674.1 23073.6 27353.9 23207.2 23363.1 26308.8 23491.300000000003 24132.199999999997 25897.5 True False 22998.620709692575 23881.340901446118 24212.900776439692 24498.80386805235 25432.656429832095 23018.20825752264 24252.19555527887 25784.05034514567 22504.042354196274 22608.488773572994 22712.271677778506 1.0126076790545893 1.0514730204117546 1.0660712904438083 1.078659335165569 1.119775986772613 1.0134701003970228 1.067801402666692 1.1352475309800283 0.9908318583655389 0.9954305361578141 1.0 14.47118439093818 -8.807642986836768 24.999709898439395 0.9956705462388437 1.06775240571651 0.4575065141136464 0.03526340978056354 75.81801419436017 41023.03744338566 0.005946600213100488 0.006330647855257138 1.5572452439950864e-09 8.807642986836768 0.07208185947766632 ELDQDMVT(ph)EDEDDPGSHK ddPTM_A549_MK2206_60min_R1 4 ELDQDMVTEDEDDPGSHK 18 0 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 ELDQDMVT(1)EDEDDPGSHK;ELDQDMVT(1)EDEDDPGSHK;ELDQDMVT(1)EDEDDPGSHK;ELDQDMVT(1)EDEDDPGSHK 142.99 9.8929e-17 23917900.0 2447.37 2714.4300000000003 1966.0700000000002 2063.3999999999996 3033.8 2769.0200000000004 2716.02 2583.64 3344.17 2652.87 2383.43 True False 2860.4262235482506 2852.58289273206 2244.8882895730258 2568.933092629547 2587.5320388505593 3062.035858473283 3209.485677267671 2949.878882065656 2586.720834542131 2053.584824501768 1791.55855167842 1.5966133068151545 1.5922353696225113 1.2530365181031367 1.4339096482349654 1.4442910818775263 1.7091464052930996 1.7914489449763544 1.646543384977323 1.4438382893591526 1.146256047606074 1.0 10.806999479109825 -10.11974854747664 0.7997584643318433 1.0255613178999177 1.5481064744724318 0.6037471728817588 0.14664059507010493 0.29134382975748196 0.3682305399633972 0.07922126305526792 0.03253832008921205 7.590169116640682e-11 10.11974854747664 0.5225451565725141 ELDQDMVT(ph)EDEDDPGSHK ddPTM_A549_PD325901_60min_R1 3 ELDQDMVTEDEDDPGSHK 18 0 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 ELDQDMVT(1)EDEDDPGSHK;ELDQDMVT(1)EDEDDPGSHK;ELDQDMVT(1)EDEDDPGSHK 137.64 1.2455e-13 18082900.0 1992.71 2215.63 2304.67 2260.1000000000004 2429.75 1616.77 2228.46 1982.69 1926.74 2217.93 2206.7799999999997 True False 2195.008452244433 2402.348915854162 2461.07876530655 2399.7012439404807 2259.092742182449 1603.603561158385 2313.2652647601035 1943.1436925597834 1845.7658182188356 2077.8895212856983 1935.3600499309985 1.134160257324053 1.2412930172552714 1.2716387141474244 1.2399249659132094 1.1672725921272338 0.8285815144399402 1.1952635194896053 1.0040218059833685 0.9537066853708398 1.0736449382427737 1.0 10.918386271666918 -7.06624314056833 7.407983153193878 0.9885833336624582 1.224064755544572 0.5568807798741926 0.08947558739543343 0.12729136564458676 12.64370957063347 0.01191539407670967 0.020769521298454968 8.585327357947462e-08 7.06624314056833 0.23548142188211385 ELDQDMVT(ph)EDEDDPGSHKR ddPTM_A549_MK2206_60min_R1 10 ELDQDMVTEDEDDPGSHKR 19 1 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR 109.39 4.5599e-10 228223400.0 13586.329999999998 14378.92 13466.289999999999 13625.620000000003 18744.88 14433.67 13861.000000000002 14287.810000000003 21091.530000000002 19222.98 19610.23 True False 15879.3703501229 15110.745610667005 15376.012413085167 16963.897511677336 15987.532983192381 15961.031379105274 16379.36428030987 16313.150822083011 16314.332131252428 14880.495467060582 14740.468676185457 1.077263599886579 1.025119753151388 1.0431155718899554 1.1508384084886003 1.084601401380247 1.082803520683962 1.11118341215108 1.1066914614756016 1.1067716020189837 1.0094994802371073 1.0 13.847494775492551 -10.781913127570634 1.0096810730381671 0.9995676761503135 1.0881681965995582 0.49375977359671497 0.032240379366456476 0.3792187818451838 0.6810679452015491 0.02409024829890468 0.005954210338206095 1.6522922751169295e-11 10.781913127570634 0.08860052044924471 ELDQDMVT(ph)EDEDDPGSHKR ddPTM_A549_PD325901_60min_R1 9 ELDQDMVTEDEDDPGSHKR 19 1 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(0.999)EDEDDPGS(0.001)HKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR 147.41 5.0957e-21 276857200.0 27808.94 29683.21 28941.31 28184.16 33966.990000000005 28205.2 27548.52 28564.76 31954.670000000002 32737.270000000004 34241.5 True False 30632.083116940394 32184.718279934565 30905.441334834988 29925.031552328455 31581.265802154074 27975.50620260425 28596.89400372857 27995.013453179294 30611.726345258252 30670.233185222543 30030.01257475247 1.0200489607085317 1.0717517416890345 1.0291517946555417 0.9965041299212684 1.0516567624985216 0.9315848980404513 0.9522771238454697 0.9322344898621825 1.0193710798174909 1.0213193587207599 1.0 14.87411745855804 -6.352021387496166 1.4864167402974207 0.9951000198684666 1.0464430267734133 0.2667393206188271 0.03776917202744012 0.5295738140054695 2.200189150681227 0.005976985268318945 0.02160871550445243 4.44609371461279e-07 6.352021387496166 0.05134300690494664 ELDRYS(ph)LDSEDLYSR ddPTM_A549_MK2206_60min_R1 4 ELDRYSLDSEDLYSR 15 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 ELDRYS(1)LDSEDLYSR;ELDRYS(0.974)LDS(0.026)EDLYSR;ELDRYS(0.997)LDS(0.003)EDLYSR;ELDRYS(0.998)LDS(0.002)EDLYSR 241.8 3.2409999999999996e-65 78884500.0 10452.0 12054.0 10895.400000000001 8667.8 14262.300000000001 12137.6 8818.300000000001 10441.199999999999 16302.5 15675.4 15379.7 True False 12216.042073134144 12667.497113203217 12440.531552901963 10791.411389112322 12164.334563154564 13421.992775713186 10420.470964075937 11921.272074833929 12610.00977974299 12134.316252961893 11560.496031873654 1.0567057018533696 1.0957572303366077 1.0761243737813626 0.9334730412396773 1.052232925785888 1.1610222207340555 0.901386146004935 1.031207661156197 1.0907844909920563 1.0496362975694251 1.0 13.496915681139878 -14.99995110485313 0.003986971045586004 6.033407919575992e-05 2.025348223411099 0.01541964509262983 0.069775565101985 236346.26535337509 73.40306127901334 19767.56084715918 17579.96042232303 1.0001125915742582e-15 14.99995110485313 2.0252878893319033 ELDRYS(ph)LDSEDLYSR ddPTM_A549_PD325901_60min_R1 4 ELDRYSLDSEDLYSR 15 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 ELDRYS(0.999)LDS(0.001)EDLYSR;ELDRYS(0.999)LDS(0.001)EDLYSR;ELDRYS(0.999)LDS(0.001)EDLYSR;ELDRYS(1)LDSEDLYSR 237.4 1.6389999999999997e-64 110664000.0 9457.800000000001 9860.7 9862.900000000001 9491.1 11416.599999999999 11970.3 10404.9 10837.399999999998 10407.400000000001 10883.9 12258.3 True False 10417.948893535633 10691.695795129666 10532.25570443577 10077.343691147958 10614.737401131862 11872.81784554031 10800.864163279753 10621.239555224172 9970.01317070841 10196.688696542009 10750.606811766085 0.9690568240421208 0.9945202147499299 0.9796894155694227 0.9373744075654159 0.9873616984591493 1.1043858317417035 1.0046748385829407 0.9879665158621255 0.9273907366602461 0.9484756418942012 1.0 13.392130473747278 -4.466350171380251 23.760105705396732 0.9791778738512679 0.9919424638750156 0.0 0.045342187106993434 0.0 0.0 0.0065025544127013035 0.0 3.4170381582809166e-05 4.466350171380251 0.012764590023747746 ELDS(ph)EAS(ph)T(ph)ILK ddPTM_A549_PD325901_60min_R1 1 ELDSEASTILK 11 0 A0A3B3ISZ1;Q8NB66 A0A3B3ISZ1 UNC13C Protein unc-13 homolog C 3 ELDS(1)EAS(1)T(1)ILK 43.604 0.032561 5771100.0 2309.4 2318.9 3185.8 3217.3 2974.0 3157.5 2804.5 3308.0 2791.5 2467.3 4262.4 True False 2543.848587909575 2514.3218411802573 3402.0075457716753 3416.0253139815563 2765.1164997430214 3131.7863668657888 2911.226782181286 3242.0193449242047 2674.1829627027405 2311.514256927949 3738.151821579807 0.6805097035450265 0.6726109481871343 0.910077414762124 0.9138273342086694 0.7397014973496812 0.8377900407325464 0.7787877328510836 0.8672786712964675 0.7153756964243857 0.6183575112128709 1.0 11.868109448660174 -10.921166526646505 1.104193764879897 1.0033344632357235 0.7893831013582967 0.0 0.1383930390354735 0.37855108896393574 0.7984996923144309 0.06390307557460691 0.014152739796084522 1.1990394531773504e-11 10.921166526646505 -0.2139513618774268 ELDTVTLEDIKEHVK ddPTM_A549_MK2206_60min_R1 1 ELDTVTLEDIKEHVK 15 1 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 84.566 0.0005868 1111300.0 322.43 387.29 308.13 531.91 594.48 380.79 316.73 453.32 585.74 602.64 448.58 False True 376.8483013433451 407.0014067506616 351.8274673160855 662.2279738783473 507.0327795028941 421.0849450520555 374.2757411804736 517.5794982342757 453.07082523457495 466.5032054483429 337.18520582182236 1.1176299992903063 1.207055943509372 1.0434249820023258 1.9639888181460907 1.5037219034183358 1.2488239038416413 1.1100004825782626 1.5350006147890678 1.3436853616703148 1.3835221634689856 1.0 8.397397428439914 -10.54533374020652 0.7586549092094127 0.9891984352829934 1.3484560658634401 0.0 0.2711990389404971 0.9256210647393333 0.9161428976970174 0.19582034147812694 0.04936730759447806 2.8488282007138798e-11 10.54533374020652 0.3592576305804467 ELDTVTLEDIKEHVK ddPTM_A549_PD325901_60min_R1 2 ELDTVTLEDIKEHVK 15 1 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 ; 124.45 8.422299999999999e-07 4989600.0 1782.1799999999998 1544.45 1727.21 1595.94 1597.26 1802.56 2024.4 2227.1000000000004 2067.9 1789.65 1939.0900000000001 False True 1963.1056016284265 1674.6062217477472 1844.428857157478 1694.517589157282 1485.07396784786 1787.8805489968624 2101.4396497941852 2182.6787433738477 1980.9933543159577 1676.65119357642 1700.594222904277 1.1543645010600072 0.9847182821119153 1.0845790443810635 0.9964267585617117 0.8732676777601001 1.0513269567289942 1.2357090371654584 1.2834800412565592 1.1648830318456656 0.9859207863902023 1.0 10.73182322669777 -7.530771499080932 24.907423515555088 1.1107821271847607 1.013519367283109 0.2027037577866897 0.10527033165279302 278.9024551958408 880139.3654048349 0.017814590935395617 0.026448072958180677 2.945971227689034e-08 7.530771499080932 -0.09726275990165156 ELDVEEAHAAS(ph)TEEK ddPTM_A549_MK2206_60min_R1 1 ELDVEEAHAASTEEK 15 0 Q96C86 Q96C86 DCPS m7GpppX diphosphatase 1 ELDVEEAHAAS(0.5)T(0.5)EEK 72.819 0.00030255 820650.0 367.94 194.38 140.91 264.26 278.69 91.76100000000001 280.92 300.45 324.97 300.59 344.3 True False 430.0392767306712 204.27311173589206 160.89315684779035 329.00371186308223 237.69507017841056 101.47108811397793 331.95952771262176 343.0397075895353 251.36481387045427 232.68651023117837 258.80080780340944 1.6616612613409543 0.7893063142641433 0.6216872281558263 1.2712623065419502 0.9184479453362787 0.39208180598515563 1.2826835067871396 1.325497051192033 0.9712675010713115 0.8990949920370108 1.0 8.015698310243298 -5.25176026023995 24.046065692225575 0.9702714591664491 1.6616619032683826 0.36114292708066875 0.2716249492726862 637.2559448713346 1583093.315646153 0.035288091660182125 0.6140025628193951 5.600666848591392e-06 5.25176026023995 0.6913904441019335 ELDYER ddPTM_A549_PD325901_60min_R1 1 ELDYER 6 0 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 0 105.2 0.021785 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ELEAIFGRPVVDGEEGEPHS(ph)ISPR ddPTM_A549_MK2206_60min_R1 4 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 ELEAIFGRPVVDGEEGEPHS(0.5)IS(0.5)PR;ELEAIFGRPVVDGEEGEPHS(0.588)IS(0.412)PR;ELEAIFGRPVVDGEEGEPHS(0.5)IS(0.5)PR;ELEAIFGRPVVDGEEGEPHS(0.5)IS(0.5)PR 140.71 6.052e-28 48695600.0 2959.89 2928.52 2665.4500000000003 2395.3900000000003 4512.380000000001 3839.2999999999997 3270.71 3175.2599999999998 4991.92 3871.74 4069.73 True False 3459.447069637297 3077.569159279735 3043.4508900712694 2982.260657533143 3848.6148795136414 4245.57217767892 3864.955670244016 3625.36282882592 3861.2580904581905 2997.111244959787 3059.1037221660463 1.1308694911422557 1.0060362245908465 0.9948831966757591 0.9748805298505886 1.2580857757868273 1.3878483906628625 1.2634274680648532 1.185106213482335 1.2622187546240395 0.9797350849018077 1.0 11.578893308497632 -6.751733590996615 24.999497255508526 1.1699946786227309 1.0229233997014227 0.3001922391357852 0.11786450559046269 258.4471591333916 665684.9644142955 0.019682510249092677 0.040567710078766715 1.7711951283036034e-07 6.751733590996615 -0.14707127892130822 ELEAIFGRPVVDGEEGEPHSIS(ph)PR ddPTM_A549_MK2206_60min_R1 4 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 ELEAIFGRPVVDGEEGEPHS(0.277)IS(0.723)PR;ELEAIFGRPVVDGEEGEPHS(0.418)IS(0.582)PR;ELEAIFGRPVVDGEEGEPHS(0.015)IS(0.985)PR;ELEAIFGRPVVDGEEGEPHS(0.148)IS(0.852)PR 176.26 1.1004e-41 164635500.0 3373.4800000000005 4381.4 3759.7300000000005 3300.96 4666.63 3962.62 3410.7599999999998 4113.4800000000005 5804.65 4339.09 5212.450000000001 True False 3942.840950332621 4604.394545527509 4292.916248636309 4109.695348185726 3980.1749088473816 4381.94181822573 4030.4509424074517 4696.578387004168 4489.906043121311 3358.8865553711175 3918.0548086984663 1.0063261344836543 1.1751735925963314 1.095675394613065 1.0489121640314472 1.0158548318443639 1.118397274202849 1.028686718077413 1.1987015537856445 1.1459528419952878 0.8572842186674009 1.0 11.935921863912409 -10.987306240565076 1.3084483362471238 1.0008634827160252 1.098948105409299 0.33499358778562616 0.07582944946386584 0.487997020496636 1.5076418000571874 0.041434771046887316 0.009866453355413501 1.0296598049708613e-11 10.987306240565076 0.09808462269327389 ELEAIFGRPVVDGEEGEPHSIS(ph)PR ddPTM_A549_PD325901_60min_R1 4 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 ELEAIFGRPVVDGEEGEPHS(0.179)IS(0.821)PR;ELEAIFGRPVVDGEEGEPHS(0.497)IS(0.503)PR;ELEAIFGRPVVDGEEGEPHS(0.029)IS(0.971)PR;ELEAIFGRPVVDGEEGEPHS(0.023)IS(0.977)PR 191.51 3.6908999999999997e-51 229309000.0 4215.639999999999 5327.280000000001 4871.01 5461.5 5928.8 5026.43 5714.37 6145.04 5491.64 6041.43 6889.0 True False 4643.608669409856 5776.228581690785 5201.586030362636 5798.8444510335585 5512.381541249635 4985.496420587555 5931.833477373246 6022.472356509382 5260.845468492522 5659.973078763109 6041.696672969051 0.7685934797398332 0.9560606720847162 0.860947894593066 0.9598039697984129 0.9123896546995471 0.8251815161282416 0.9818158372486092 0.99681805997549 0.8707563046039519 0.9368184775124844 1.0 12.560738039170124 -14.999999999999952 0.2923495178909261 1.792334796419986 0.8961309865799343 0.10603364596203835 0.06802542817985033 49.91773935790998 0.6596169830521739 23.34953279488045 0.02425764618977505 1.0000000000001105e-15 14.999999999999952 -0.8962038098400518 ELEAIFGRPVVDGEEGEPHSISPR ddPTM_A549_MK2206_60min_R1 2 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 0 ; 52.321000000000005 0.024516 3619600.0 855.56 804.89 629.71 849.1 1068.63 818.49 513.01 891.86 1548.99 933.2 1075.99 False True 999.9576115662697 845.8554630368457 719.012346878306 1057.129538117547 911.4359426056011 905.1020685303097 606.2172764910007 1018.2838862066997 1198.1462382287432 722.3894718644522 808.7919871867281 1.2363594439708596 1.0458257208742112 0.8889953885167579 1.3070474916481643 1.1269102031733844 1.1190789261879102 0.7495342264698297 1.2590182671673842 1.4814022112117238 0.8931709058804908 1.0 9.659624894108587 ELEAMGLGT(ph)PSEAIEIR ddPTM_A549_PD325901_60min_R1 2 ELEAMGLGTPSEAIEIR 17 0 O95359-3;E7EMZ9;E9PBC6;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 ELEAMGLGT(0.984)PS(0.016)EAIEIR;ELEAMGLGT(0.656)PS(0.344)EAIEIR 106.19 1.1512e-08 6991100.0 1925.9299999999998 2213.0 1667.56 2276.9 2174.3 1872.38 1803.05 2128.0 1714.1999999999998 1823.74 1990.7 True False 2121.4489958052695 2399.497276524174 1780.7306494528889 2417.538941784914 2021.5846689277914 1857.1319580656102 1871.666054416819 2085.5553706162937 1642.158135291076 1708.5887451585847 1745.856520087023 1.215133644372749 1.374395460862139 1.0199753696621803 1.3847294516873647 1.157932880318839 1.0637368745359674 1.0720617833609403 1.1945743230447932 0.9406031460186784 0.9786535866495027 1.0 10.769719283340468 -7.722307465157046 0.6374027217934786 0.972205971971995 1.255981598730165 0.44535020243743684 0.10822092639477297 0.41887852786165575 0.3447453228118769 0.023379329302883143 0.047385369562014196 1.8953635956124976e-08 7.722307465157046 0.28377562675817003 ELEAMGLGTPS(ph)EAIEIR ddPTM_A549_PD325901_60min_R1 1 ELEAMGLGTPSEAIEIR 17 0 O95359-3;E7EMZ9;E9PBC6;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 ELEAMGLGT(0.473)PS(0.527)EAIEIR 77.597 0.00013788 4869600.0 2253.1 1921.5 2527.4 2246.1 2711.8 2477.3 2239.3 2601.7 2581.1 1942.3 2144.8 True False 2481.833053355444 2083.4315485048364 2698.9245624908444 2384.8364957367876 2521.3325232021252 2457.125690146196 2324.5177868919786 2549.807052505834 2472.625343017032 1819.6628465250085 1881.003197007407 1.319419901733251 1.1076172288380393 1.434832522764828 1.2678535047313886 1.3404190525637882 1.3062846964084776 1.23578619674341 1.3555570009463378 1.3145247955723147 0.967389555435106 1.0 10.877286585571474 -10.654656316323774 0.7837248409401275 0.9867187978296484 1.2981974871490456 0.6970639649851708 0.07921934117989578 0.32167384247699327 0.3288613578286691 0.061863476409461236 0.014057435534227464 2.2148467594084553e-11 10.654656316323774 0.31147868931939715 ELEDATETADAMNR ddPTM_A549_MK2206_60min_R1 3 ELEDATETADAMNR 14 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;; 92.538 3.6993e-05 4733800.0 1427.77 1816.5600000000002 1476.74 1329.76 2174.4 1655.72 1515.59 1684.6999999999998 2686.13 2052.9 2468.59 False True 1668.742670374928 1909.0151448449026 1686.1639375729612 1655.5512596951944 1854.5486404102626 1830.9271914220135 1790.9530848852778 1923.5113841773673 2077.7258438681815 1589.1484641990282 1855.5709733819892 0.8993149247929086 1.0288020087776568 0.9087035536559055 0.8922058403822538 0.9994490466889211 0.9867190302534967 0.9651762775859023 1.036614288415791 1.1197231869181967 0.8564202000328903 1.0 10.857647468121671 -8.281614994918538 3.4427819077478117 1.0574174934321292 0.9550270604492328 0.0 0.07703620157099063 0.18273978566485155 4.588774670305597 0.009461602983128316 0.011873886392625222 5.2285950219206725e-09 8.281614994918538 -0.1023904329828964 ELEDATETADAMNR ddPTM_A549_PD325901_60min_R1 2 ELEDATETADAMNR 14 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 90.82700000000001 4.091e-05 4306800.0 1385.04 1636.75 1412.34 1701.12 1976.52 1710.13 1503.98 1765.9700000000003 1998.35 1637.74 1582.88 False True 1525.6482411874429 1774.6846666746253 1508.1898854903536 1806.194318876171 1837.696053823831 1696.203268271794 1561.214781909434 1730.7463429733357 1914.366298949318 1534.3328169015433 1388.1957947030419 1.099015172793982 1.2784109226135927 1.0864388807725645 1.3011091992700827 1.3238017726576854 1.2218761033162762 1.1246358675531096 1.2467595346257125 1.3790319105229913 1.1052711892343419 1.0 10.438995348346188 -11.037754746545243 1.3469676341752537 1.0005605579783095 1.245747704660168 0.31254126189461706 0.09488527508362142 0.31007859490253636 1.0065288030792046 0.06835700758546248 0.015474813793330069 9.16738041482986e-12 11.037754746545243 0.24518714668185848 ELEDS(ph)LER ddPTM_A549_PD325901_60min_R1 1 ELEDSLER 8 0 O00291;O00291-4;O00291-3 O00291 HIP1 Huntingtin-interacting protein 1 1 ELEDS(1)LER 53.756 0.024375 1292900.0 226.31 235.4 310.47 147.43 304.79 238.27 152.03 138.72 204.04 247.98 97.417 True False 249.28482459938343 255.2379841363719 331.54036120777585 156.53641626217654 283.38260186841825 236.32960811816676 157.8155848440081 135.9531207762652 195.46490836821326 232.32250047946837 85.43532657724288 2.9178190636867605 2.987499367789141 3.8806003849944566 1.8322211962360853 3.31692536590481 2.7661813629810257 1.8471935575891496 1.5912986609040314 2.2878698566393565 2.719279129452656 1.0 6.416760826788306 -9.201959017593454 0.14510069608486964 6.435984926254814e-15 3.9707431691190296 0.2014785627976159 0.717215780619656 2.7455846661879 0.26264208074547096 3.7928035185185474 2.6909072226539124 6.281176286372711e-10 9.201959017593454 3.9707431691190234 ELEDSPQENVS(ph)VTEIIKPCDDPK ddPTM_A549_PD325901_60min_R1 1 ELEDSPQENVSVTEIIKPCDDPK 23 1 A0A2R8Y534;A0A2R8Y4Q0;Q5F1R6;Q5F1R6-3;Q5F1R6-2 A0A2R8Y534 DNAJC21 DnaJ homolog subfamily C member 21 1 ELEDS(0.102)PQENVS(0.449)VT(0.449)EIIKPCDDPK 48.75899999999999 0.0031138000000000003 3940800.0 1279.4 1271.7 1124.6 1217.5 1278.3 1208.6 1257.2 1254.8 1572.8 1382.7 1202.2 True False 1409.2837461555007 1378.8706220315376 1200.922118769172 1292.7022098568814 1188.5166178955958 1198.7575623100531 1305.0434339662368 1229.7720296284429 1506.7006855593313 1295.3960860269417 1054.3370213736964 1.3366539518069316 1.3078082188890665 1.1390305892934403 1.2260806399196897 1.1272644266508605 1.1369775868708385 1.2377858384085714 1.166393671756088 1.4290503463458486 1.2286356826768439 1.0 10.04212038631053 -11.123748652857124 1.4952222055697093 1.0006307316839327 1.2532386679366612 0.0 0.11231054234677161 0.31573134191904284 1.2686492393691378 0.07811034651504038 0.01704191134634311 7.520580203055658e-12 11.123748652857124 0.2526079362527285 ELEEDFIK ddPTM_A549_MK2206_60min_R1 1 ELEEDFIK 8 0 H3BT58;Q14019 H3BT58 COTL1 Coactosin-like protein 0 71.37899999999999 0.017044999999999998 2756600.0 5342.4 5540.6 5297.9 5343.1 7582.6 6441.1 5050.5 5476.1 8165.4 8475.8 8512.0 False True 6244.066510860298 5822.592874183991 6049.221883925256 6652.15973986087 6467.209584609485 7122.692926743855 5968.110475269097 6252.3539448529045 6315.949937464402 6561.110893301249 6398.235480751149 0.9759044551650744 0.9100310377292368 0.9454515861637341 1.0396866073269173 1.0107801758884682 1.1132276935058438 0.9327744333924459 0.9771997238399363 0.9871393380980896 1.0254563016694376 1.0 12.643458375061934 -6.139899340538362 7.545178306549541 1.0003841284701818 0.9393840683405716 0.28333536032870843 0.04522880363638651 0.27079535939635485 15.619644116580986 0.006003439297206639 0.016005067634817044 7.246038871110625e-07 6.139899340538362 -0.06100006012961012 ELEEDFIK ddPTM_A549_PD325901_60min_R1 2 ELEEDFIK 8 0 H3BT58;Q14019 H3BT58 COTL1 Coactosin-like protein 0 ; 139.19 0.0029690000000000003 5853400.0 4606.299999999999 4293.1 3765.3 3823.1 5054.6 3842.8 4172.6 4419.3 4324.299999999999 4683.700000000001 5036.5 False True 5073.928185021164 4654.894603635757 4020.8359005882653 4059.244204109929 4699.582333423357 3811.5055108762817 4331.390576334331 4331.153594626216 4142.564709158327 4387.970382674758 4417.042429004011 1.1487161979028742 1.0538487412006543 0.9103004929692095 0.9189959728381506 1.0639658570096768 0.8629089650233968 0.9806087774690012 0.9805551257977927 0.937859387982475 0.9934182098550028 1.0 12.108864975274177 -5.507479860730566 3.826364147365501 0.9640908550885137 1.137499046210758 0.554571837638435 0.05136483883400596 0.11553372138270808 3.5740522772452925 0.006674749823492486 0.03931995968836901 3.1082800377454837e-06 5.507479860730566 0.17340819112224426 ELEEEEENS(ph)DEDELDSHT(ph)MVK ddPTM_A549_PD325901_60min_R1 3 ELEEEEENSDEDELDSHTMVK 21 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 2 ELEEEEENS(1)DEDELDS(0.08)HT(0.92)MVK;ELEEEEENS(1)DEDELDS(0.033)HT(0.967)MVK;ELEEEEENS(0.736)DEDELDS(0.307)HT(0.957)MVK 103.73 2.8651e-10 13657000.0 1571.46 2032.49 1742.53 1403.0300000000002 1890.2 1618.6499999999999 1573.05 1970.1200000000001 1764.3400000000001 1685.3400000000001 2004.98 True False 1730.9934623522918 2203.775065324275 1860.788564484123 1489.6919765876796 1757.4388728359968 1605.4682510616972 1632.9132785559893 1930.82441107076 1690.1909254576235 1578.927344778076 1758.3801706154009 0.9844250357682751 1.2532984061990384 1.058240189226475 0.8471956187189683 0.9994646790295214 0.9130381915645766 0.9286463222481061 1.0980699414933728 0.9612204196240951 0.89794423934244 1.0 10.780031306773806 -6.0032051780714575 24.999888456185953 0.9742390801477737 1.1280886321774095 0.3528810079989343 0.08576152569209493 95.30202345605959 743368.0569109165 0.010187324031710838 0.030810260627416722 9.926469715201183e-07 6.0032051780714575 0.1538495520296358 ELEEEEENS(ph)DEDELDSHTMVK ddPTM_A549_MK2206_60min_R1 10 ELEEEEENSDEDELDSHTMVK 21 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 ELEEEEENS(0.937)DEDELDS(0.049)HT(0.014)MVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK 302.57 7.685999999999998e-164 435932900.0 28459.59 29278.590000000004 27429.22 26589.529999999995 43244.11000000001 31370.68 31189.969999999994 32029.32 48580.27 38649.520000000004 38620.25 True False 33262.87302182816 30768.74517203094 31319.095846090047 33103.966043649336 36882.958704126126 34690.30453542795 36856.78381948893 36569.574195678666 37576.91641175002 29918.56658874259 29029.77606032421 1.145819139379771 1.0599029461368608 1.0788610901099824 1.14034520882486 1.2705216405211983 1.194990428563455 1.2696199840777311 1.2597263623283441 1.2944266718993889 1.030616513423027 1.0 14.825245822409448 -6.517478870231647 23.992157198573228 1.174434421949899 1.0944048753831983 0.154065065814753 0.09321277061329593 292.45196343801655 1299387.1461367365 0.01741883479971683 0.03718081411694563 3.0375338737588607e-07 6.517478870231647 -0.0800295465667007 ELEEEEENS(ph)DEDELDSHTMVK ddPTM_A549_PD325901_60min_R1 8 ELEEEEENSDEDELDSHTMVK 21 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK 339.57 7.935999999999996e-208 701033600.0 52262.74 53841.4 53310.549999999996 50880.799999999996 65237.299999999996 55102.8 56808.4 54859.4 57603.4 63717.1 61112.399999999994 True False 57568.414891004315 58378.80373440973 56928.52450537958 54023.59145731906 60655.2571044672 54654.06106607511 58970.274748749274 53765.18623063327 55182.52941921947 59693.9914319717 53595.96222342195 1.0741185063722276 1.0892388402516195 1.0621793535129642 1.0079787584018827 1.131713184877951 1.0197421372573243 1.1002745785759716 1.003157402165967 1.0296023642449725 1.113777772719693 1.0 15.709836695537154 -8.636548441979675 0.5386493623866673 1.0044936947220213 1.0723065347959493 0.0 0.04823668250160075 0.5829838587141423 0.38391203408861035 0.011327326126304165 0.012084698948621382 2.309146878200319e-09 8.636548441979675 0.06781284007392796 ELEELS(ph)LEAQGIK ddPTM_A549_PD325901_60min_R1 1 ELEELSLEAQGIK 13 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 ELEELS(1)LEAQGIK 94.71700000000001 0.00017171 1316700.0 1508.8 1678.6 1528.1 1812.3 1739.9 1672.6 1786.4 2332.9 1781.8 1960.3 1981.3 True False 1661.9722652801454 1820.0615130472122 1631.8060552117818 1924.2416549680706 1617.6954263291473 1658.9789001487622 1854.3824295555887 2286.368479375355 1706.9171423764083 1836.526323453108 1737.6126604955123 0.9564687821773832 1.047449500355383 0.939108060335174 1.1074054066913495 0.9309873616297384 0.9547460938018683 1.0672012651120864 1.3158102098101396 0.98233466018235 1.0569250358301308 1.0 10.762890804638655 -7.757859219490391 24.990464904391764 1.0260651921050188 0.9924293683581887 0.06179515911244271 0.10214366914069203 387.73675220371433 2706503.918879807 0.016629739226301052 0.024128777814261534 1.746388168797903e-08 7.757859219490391 -0.03363582374683005 ELEEVS(ph)PETPVVPATTQR ddPTM_A549_MK2206_60min_R1 2 ELEEVSPETPVVPATTQR 18 0 Q15149 Q15149 PLEC Plectin 1 ELEEVS(0.75)PET(0.25)PVVPATTQR;ELEEVS(0.848)PET(0.152)PVVPATTQR 149.0 5.0415e-17 23744100.0 1851.01 1839.54 1460.65 2164.8 2793.9 1944.57 1573.81 2032.3799999999999 2707.4 2424.73 2601.2 True False 2163.415235150404 1933.164728689386 1667.7921336294442 2695.1760971815643 2382.9210110569493 2150.3431066989015 1859.7509052733903 2320.4760889027125 2094.178222829392 1876.9818089518785 1955.2502505321786 1.106464624956098 0.9887045037652948 0.8529814192201257 1.378430252827224 1.218729423718712 1.099778970039064 0.9511574821520696 1.186792375181196 1.0710538061608226 0.9599701155598895 1.0 10.93313755311364 -10.002672800136075 0.7631139955006792 1.0042324577147284 1.0958833882709669 0.09188597174305213 0.13408191623108984 1.428258557293161 1.6773464952086607 0.06491625737738173 0.02845956057682026 9.93864549469864e-11 10.002672800136075 0.09165093055623852 ELEEVS(ph)PETPVVPATTQR ddPTM_A549_PD325901_60min_R1 2 ELEEVSPETPVVPATTQR 18 0 Q15149 Q15149 PLEC Plectin 1 ELEEVS(1)PETPVVPATTQR;ELEEVS(0.999)PET(0.001)PVVPATTQR 243.83 9.720099999999999e-75 30054000.0 6189.0 5563.9 5535.299999999999 5747.9 6779.0 6334.1 5977.1 5719.5 5422.2 6913.200000000001 5802.6 True False 6817.302723899004 6032.789379508746 5910.958744462914 6102.934728571964 6302.866426280406 6282.517189664165 6204.561811294619 5605.420085639048 5194.323790208421 6476.699372185909 5088.916985712039 1.3396372436492263 1.1854760838989478 1.1615356982750733 1.1992600283531731 1.23854769963368 1.2345489634245073 1.219230305527666 1.1014956819647825 1.0207130131602322 1.2727068235481724 1.0 12.31314294182935 -8.487505713723206 2.1542862689166333 1.0085204785834452 1.2225803982305707 0.1574224782637571 0.09040208058808283 0.08351570998716334 0.7641978664869914 0.007434737092539372 0.00883705497562283 3.254575016423243e-09 8.487505713723206 0.21405991964712556 ELEEVSPET(ph)PVVPATTQR ddPTM_A549_MK2206_60min_R1 2 ELEEVSPETPVVPATTQR 18 0 Q15149 Q15149 PLEC Plectin 1 ELEEVS(0.185)PET(0.815)PVVPATTQR;ELEEVS(0.003)PET(0.997)PVVPATTQR 126.63 2.6171999999999996e-11 5320900.0 1592.85 1637.9 1516.33 1562.74 1993.4 1785.48 1309.46 1641.38 2303.2 2541.2 2502.8999999999996 True False 1861.6841385564214 1721.2621139634614 1731.3683948833288 1945.6113701540655 1700.1735006410122 1974.4183084942974 1547.3719320752148 1874.0506415154323 1781.5288774546264 1967.1411550599498 1881.3608534741613 0.989541232942418 0.9149026943900431 0.9202744873138754 1.0341510861997887 0.9036934607741175 1.049462842201853 0.8224748214664956 0.996114402005745 0.9469362956951172 1.0455948158097288 1.0 10.877560875462382 -10.71007543460188 0.7991308126420592 1.002424223233996 0.9517295527797069 0.13396824789767392 0.06280997380979646 1.496876360867956 1.565402932820006 0.04809537430677556 0.01036105363915061 1.9495059517116663e-11 10.71007543460188 -0.05069467045428899 ELEFYLR ddPTM_A549_MK2206_60min_R1 1 ELEFYLR 7 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 116.54 0.019717 3280000.0 639.29 754.39 596.44 513.77 894.36 1062.1 806.33 546.7 1104.7 870.89 859.5 False True 747.1865228601159 792.7852287397857 681.0241606010652 639.6436730640114 762.8008287515283 1174.49071703508 952.8297236954232 624.1963991985322 854.4872138434037 674.1553441406263 646.0624290067691 1.1565237186270234 1.2271031298919246 1.0541150978985807 0.9900648054203901 1.1806921351613469 1.8179214024884496 1.4748260863277038 0.9661549274087136 1.322607809212894 1.0434832825320708 1.0 9.335529769038807 -5.021445868143834 16.64583550429116 1.1940452449936478 1.1400560225771876 0.0007834856128684509 0.2448197347169564 22338534.508196767 1047476142.5199382 0.035155412296155895 14967328.908456089 9.518184784253487e-06 5.021445868143834 -0.0539892224164602 ELEFYLR ddPTM_A549_PD325901_60min_R1 2 ELEFYLR 7 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 ; 72.138 0.055362 9254700.0 2088.56 1393.04 1751.1399999999999 1723.54 2226.55 2012.31 2077.75 2165.66 1932.25 1988.14 2131.65 False True 2300.5890736833917 1510.4363696743048 1869.982890860258 1829.999151356655 2070.164809180504 1995.9224145392548 2156.819913238426 2122.4642123725966 1851.044252080376 1862.6085011019052 1869.4705636426895 1.230609948305718 0.8079487310734642 1.0002740493632434 0.9788863151666192 1.107353519996998 1.0676404610780135 1.1537062712749178 1.1353290357441872 0.9901435668896494 0.9963294086174785 1.0 10.868414039612619 ELEIES(ph)QTEEQPTTK ddPTM_A549_MK2206_60min_R1 1 ELEIESQTEEQPTTK 15 0 Q9NYH9 Q9NYH9 UTP6 U3 small nucleolar RNA-associated protein 6 homolog 1 ELEIES(0.879)QT(0.112)EEQPT(0.005)T(0.005)K 56.482 0.012131 836540.0 853.09 934.73 850.34 947.03 1095.4 980.14 893.02 719.34 1245.2 1263.4 1547.7 True False 997.0707359519716 982.3037644453664 970.9309984667516 1179.0523925137916 934.2681110676051 1083.8577642357238 1055.270174561887 821.3086478863578 963.1641881757993 977.9970625305921 1163.3633756530267 0.8570587288707533 0.8443653848858472 0.8345896207380109 1.0134859126469906 0.8030750585930864 0.9316588324153885 0.9070856076843024 0.7059777409834098 0.8279134519213739 0.8406634444561368 1.0 10.184086076547214 -10.76337874448291 1.0835299866880503 0.9977570623116724 0.8583985182282171 0.0 0.08680839456551927 0.458074949581019 0.9787195650949282 0.04648047522479934 0.012621750809585535 1.7243334597026883e-11 10.76337874448291 -0.13935854408345527 ELEIS(ph)VGK ddPTM_A549_MK2206_60min_R1 1 ELEISVGK 8 0 A0A3B3IS53;Q92794;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 ELEIS(1)VGK 90.15 0.0026425 1963900.0 625.48 819.92 719.35 781.97 1316.0 1126.4 955.21 872.63 1426.1 1451.4 1455.5 True False 731.0457324821988 861.6504258385253 821.3646467848836 973.5526851039671 1122.4181432946584 1245.5949003561934 1128.7592925614879 996.3279748172945 1103.0906270137386 1123.527731958922 1094.0591802435736 0.6681957847284312 0.7875720449114038 0.7507497415286263 0.8898537690504295 1.025920867502589 1.1385077908480994 1.031716851286042 0.9106710064765227 1.0082549892485289 1.0269350618755264 1.0 10.09547506368351 -6.4420928064162934 2.4291931142433802 1.0104576445812379 0.7354423922202088 0.8284511346542391 0.056732382269355515 0.09180303522883757 1.0560092769708838 0.008340454224200836 0.02200805821721447 3.6133263952940926e-07 6.4420928064162934 -0.2750152523610291 ELEIS(ph)VGK ddPTM_A549_PD325901_60min_R1 2 ELEISVGK 8 0 A0A3B3IS53;Q92794;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 ELEIS(1)VGK;ELEIS(1)VGK 116.3 0.0012875999999999999 7762400.0 3336.7 3441.9 3496.4 3341.1000000000004 3871.7 4201.4 3252.5 3595.4 3708.2 3578.3 4030.2 True False 3675.439327651287 3731.9609923491 3733.6867295612055 3547.472158811354 3599.765148639895 4167.185191369732 3376.275667336292 3523.686926463263 3552.357249612862 3352.3655273235004 3534.5109495427296 1.0398721011535668 1.0558634689848436 1.056351722448121 1.0036670445936238 1.0184620163945475 1.1789990895087914 0.9552313504002841 0.9969376178956619 1.0050491568210989 0.9484665842546636 1.0 11.787294895883822 ELEKPIQSKPQS(ph)PVIQAAAVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 2 ELEKPIQS(0.003)KPQS(0.997)PVIQAAAVS(1)PK;ELEKPIQS(0.017)KPQS(0.983)PVIQAAAVS(1)PK 172.83 5.7883e-41 37412000.0 4252.1 5011.799999999999 5326.5 4350.7 6096.0 4078.5 4425.3 5007.2 6957.3 5805.799999999999 6567.8 True False 4969.750526136023 5266.879212871405 6081.877793980239 5416.621695310344 5199.286475322368 4510.084162910809 5229.31972798898 5716.985933906874 5381.482658525128 4494.265747696783 4936.833997941429 1.0066675379825045 1.0668536181422343 1.231938889684416 1.097185300856577 1.0531621029774096 0.913557993805632 1.0592456076443957 1.1580267710623358 1.0900675738274994 0.9103538319438758 1.0 12.269370419639195 -10.72703254500868 1.0177226508075943 1.0006318487915393 1.0769254909412858 0.20388052801450407 0.08131202715644481 0.976054873900377 1.8208020843103927 0.05227894944399697 0.014005952441044252 1.8748540056463042e-11 10.72703254500868 0.07629364214974643 ELEKPIQSKPQS(ph)PVIQAAAVS(ph)PK ddPTM_A549_PD325901_60min_R1 4 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 2 ELEKPIQS(0.12)KPQS(0.88)PVIQAAAVS(1)PK;ELEKPIQS(0.001)KPQS(0.999)PVIQAAAVS(1)PK;ELEKPIQS(0.001)KPQS(0.999)PVIQAAAVS(1)PK;ELEKPIQS(0.015)KPQS(0.985)PVIQAAAVS(1)PK 187.69 2.6213999999999994e-50 82328000.0 13133.9 13261.199999999999 14457.2 14553.300000000001 18046.6 18042.2 16033.3 17513.100000000002 15082.6 16272.099999999999 16122.7 True False 14467.24385933384 14378.767864185442 15438.352530205992 15452.224288057618 16779.069073390187 17895.27030507235 16643.4560052584 17163.787481738837 14448.730773154346 15244.676828986034 14139.710110216018 1.0231641063759276 1.0169068355790905 1.0918436382264796 1.0928246878904047 1.1866628765795713 1.2656037617166507 1.1770719396314504 1.2138712426174783 1.021854808940889 1.0781463488400425 1.0 13.787464922126684 -8.874034156818364 7.929607005955897 1.0096519171568736 1.1343654437660449 0.24495936324178968 0.07544862416879738 0.2022817421562526 13.420613221710834 0.014026971475025254 0.014902359597165604 1.3364903988050929e-09 8.874034156818364 0.12471352660917123 ELEKPIQSKPQSPVIQAAAVS(ph)PK ddPTM_A549_MK2206_60min_R1 4 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK 155.14 1.8232999999999998e-33 351167200.0 11069.980000000001 12587.07 11529.750000000002 12048.3 16643.100000000002 12013.23 11929.9 12971.100000000002 18779.8 17717.6 16083.5 True False 12938.321988973743 13227.698099277168 13164.841921551419 15000.134040868743 14194.922036981261 13284.462024863316 14097.40840687315 14809.79314732775 14526.20528517819 13715.181854592392 12089.523067981809 1.0702094628728502 1.0941455692582058 1.088946342012243 1.2407548218833766 1.174150705297502 1.0988408682594115 1.1660847435916701 1.2250105371443785 1.2015532129344084 1.1344683969308946 1.0 13.561469710899972 -10.856241309173528 1.1176524800757082 1.0004845767286867 1.155152354207202 0.07845585482096973 0.06709023320405519 0.3411078847642286 0.7602711339386308 0.0405408480868135 0.010002748990278558 1.3923829314113053e-11 10.856241309173528 0.15466777747851523 ELEKPIQSKPQSPVIQAAAVS(ph)PK ddPTM_A549_PD325901_60min_R1 4 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK 196.32 4.8365999999999994e-61 778729700.0 17348.3 17296.7 18062.1 17158.1 20640.399999999998 19785.899999999998 20073.0 22807.499999999996 20609.399999999998 20630.999999999996 20431.2 True False 19109.486644856534 18754.353611773924 19287.902722230716 18217.916868127602 19190.689509514403 19624.770190394243 20836.888999367067 22352.586520362373 19743.25858911907 19328.355139091498 17918.2919240478 1.066479256273867 1.046659675557806 1.0764364596797749 1.0167217358300586 1.071011098092388 1.0952366594751262 1.1628836659035715 1.2474730635660305 1.1018493655984036 1.0786940642010234 1.0 14.129145497405096 -4.948385689878875 16.906037939193016 1.072203927888932 1.023823060325757 0.0 0.06698513554849296 2556307.62615108 18824685.692400362 0.010676850160105016 4149759.301914224 1.1261968547887247e-05 4.948385689878875 -0.048380867563174945 ELEKPIQSKPQSPVIQAAAVSPK ddPTM_A549_MK2206_60min_R1 2 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 0 ; 132.1 1.5524000000000003e-22 19048700.0 4483.0 5247.3 5091.4 4107.4 7172.4 5676.5 4885.700000000001 4867.5 7243.0 7058.1 7421.299999999999 False True 5239.62080117302 5514.365156969576 5813.437078808032 5113.7131843881925 6117.349461220827 6277.183462244257 5773.368448474853 5557.483031093568 5602.472064694277 5463.670307936661 5578.386392539768 0.9392717593353168 0.988523341506818 1.042135963651175 0.9167011434035828 1.0966163027720415 1.1252686745828546 1.0349531284164617 0.9962527942714482 1.0043176772743314 0.9794356151527039 1.0 12.445632152211257 -5.369820747648931 3.0768071955361216 1.0147921222936975 0.9352803189264147 0.16293132120898446 0.05366962036839553 0.44393764927207 6.617049221198525 0.007341449584451235 0.07308271007655241 4.267556231900365e-06 5.369820747648931 -0.07951180336728281 ELEKPIQSKPQSPVIQAAAVSPK ddPTM_A549_PD325901_60min_R1 1 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 0 119.02 8.5969e-16 8390300.0 3452.3 2895.9 3884.8 3551.4 3942.5 4751.0 3362.5 4021.7 4271.6 4105.8 3820.4 False True 3802.7749545510665 3139.947656161936 4148.445889200139 3770.7619121854027 3665.5924008866364 4712.309431189031 3490.461777530601 3941.4840385373827 4092.0795068891393 3846.5590872997864 3350.515019510954 1.1349822139003947 0.937153732449242 1.2381517065414178 1.1254275507577902 1.0940384924529218 1.4064433090877015 1.0417687302413805 1.176381545996677 1.2213285071279654 1.1480500952540829 1.0 11.71016715903419 -4.84279059307186 18.79659637397141 1.124187238517753 10.871127336215398 0.0 0.12191420063001868 11132.678692326588 1344646.2111363937 0.017046883259304136 47851.81673538027 1.4361817606301552e-05 4.84279059307186 9.746940097697646 ELELMFGCQVEGDAAET(ph)PPRPR ddPTM_A549_MK2206_60min_R1 1 ELELMFGCQVEGDAAETPPRPR 22 1 H3BRW9;Q02750-2;Q02750 H3BRW9 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 1 ELELMFGCQVEGDAAET(1)PPRPR 41.423 0.031389999999999994 999070.0 434.82 290.32 300.28 264.97 588.34 465.4 506.27 645.58 743.95 416.61 624.73 True False 508.2069856716601 305.09604794301976 342.86421927652003 329.8876618949555 501.7959653692855 514.6483190924824 598.2527057349743 737.0929420058316 575.4465128440296 322.49751165178895 469.5922993291434 1.0822302375862667 0.6497041122243232 0.7301316903329413 0.7024980230004431 1.068577926184369 1.0959471009803734 1.2739832117980519 1.5696444406325187 1.2254172686947995 0.6867606477203883 1.0 8.875264940192988 -6.885818539098398 4.1522406496663 1.158456387928454 0.7773310869592398 0.34632765187144865 0.22508380381165488 0.1568759613926107 4.912490288916027 0.02852808190091385 0.05566658812554533 1.300712940313424e-07 6.885818539098398 -0.38112530096921415 ELELMFGCQVEGDAAET(ph)PPRPR ddPTM_A549_PD325901_60min_R1 1 ELELMFGCQVEGDAAETPPRPR 22 1 H3BRW9;Q02750-2;Q02750 H3BRW9 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 1 ELELMFGCQVEGDAAET(1)PPRPR 102.69 2.9449e-10 3797800.0 943.6 1233.1 1416.4 1301.1 1387.7 1222.0 1320.0 1719.1 1521.5 1263.7 1305.9 True False 1039.3935773583946 1337.017664564827 1512.5254215051177 1381.4659919875055 1290.232739305108 1212.0484371528094 1370.233322331716 1684.8112018921402 1457.5566461587748 1183.9097663356088 1145.2825787821582 0.9075433404947439 1.1674129069408803 1.3206569710625207 1.2062228288292782 1.1265627917584176 1.0582964061512634 1.196415057486302 1.471087776157123 1.272661152070151 1.0337272113180356 1.0 10.16148788709797 -10.87877373322161 1.210481569860935 1.00338754782923 1.2031271700329826 0.19032773146838033 0.1371466921285795 0.5680959713277266 1.5170772212326022 0.09046114545325246 0.02339635783174772 1.3219842066015501e-11 10.87877373322161 0.19973962220375263 ELEPGCGS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 ELEPGCGSPGR 11 0 A6NIX2 A6NIX2 WTIP Wilms tumor protein 1-interacting protein 1 ELEPGCGS(1)PGR;ELEPGCGS(1)PGR 88.596 0.00030429 4924800.0 1526.17 1483.92 1356.17 1417.29 1747.68 1314.74 1433.0 1312.6100000000001 2268.5 2238.83 2217.3 True False 1783.7501847259018 1559.4451896652176 1548.495298575459 1764.5261136245656 1490.5985871376968 1453.864914146219 1693.3575509475543 1498.6764871995347 1754.6883720501123 1733.076748065037 1666.6832156331677 1.0702394840211196 0.9356578232971461 0.9290879538780202 1.0587051558890437 0.8943502719390037 0.8723102869875007 1.0160044422744445 0.8991969638514612 1.052802569553394 1.0398357239150853 1.0 10.702764203824316 -8.778582076987803 24.999981208212965 1.0249345473977116 0.9577590937523337 0.20037618305116867 0.06318593376999027 283.6022191563745 413588.47105930146 0.01060964477351345 0.011308320331758727 1.6650141282795487e-09 8.778582076987803 -0.06717545364537791 ELEPGCGS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 ELEPGCGSPGR 11 0 A6NIX2 A6NIX2 WTIP Wilms tumor protein 1-interacting protein 1 ELEPGCGS(1)PGR;ELEPGCGS(1)PGR 102.4 0.00023121 6988600.0 2386.27 2440.9 2332.8 1945.6399999999999 2239.45 1816.21 2084.6099999999997 2197.3 1710.8200000000002 1933.21 2391.6 True False 2628.522373720874 2646.6032093392946 2491.1178362659816 2065.817763930957 2082.158757683089 1801.4193879225068 2163.9409742923604 2153.4731277514975 1638.92018493681 1811.1467906763173 2097.4483616015077 1.2532000414607893 1.2618204375331936 1.187689709969254 0.9849194868156853 0.9927103788592229 0.8588623304876178 1.0317016685169222 1.026710915594228 0.7813876207590693 0.8635000621867112 1.0 11.034419577149126 -6.267945591323469 1.4456467531856771 0.9149630323245692 1.2747400349371978 0.7530986978243183 0.07504155087690698 0.19120919765109345 0.7365662856162535 0.014106303301510453 0.056668886706180595 5.395782169677225e-07 6.267945591323469 0.35977700261262857 ELEQHIQTS(ph)DPENFQSEER ddPTM_A549_MK2206_60min_R1 2 ELEQHIQTSDPENFQSEER 19 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 ELEQHIQT(0.126)S(0.874)DPENFQSEER;ELEQHIQT(0.299)S(0.701)DPENFQSEER 120.64 1.1070999999999999e-14 51805000.0 1314.81 1067.5 964.34 1265.37 1737.23 1198.87 1067.46 1408.02 2180.89 1908.0700000000002 2123.3 True False 1536.717783981774 1121.8311903388449 1101.0979126719053 1575.3857068046173 1481.6857682946659 1325.7336276545007 1261.4036645739532 1607.611146880404 1686.9218971656915 1477.0356617878335 1596.0260099011894 0.962840063036888 0.7028902933783002 0.6898997296040775 0.9870676900197572 0.928359412129128 0.8306466307128525 0.7903402931710664 1.0072587394612271 1.0569513821833827 0.9254458590429097 1.0 10.64026844753168 -8.320830370514514 6.392094241796363 1.0267105512628985 0.8391448858899865 0.3670447081664968 0.09562635180745355 0.15130934689729508 13.03307265457525 0.015234948242281299 0.018486314025907225 4.777158264917047e-09 8.320830370514514 -0.18756566537291197 ELEQHIQTS(ph)DPENFQSEER ddPTM_A549_PD325901_60min_R1 2 ELEQHIQTSDPENFQSEER 19 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 ELEQHIQT(0.187)S(0.813)DPENFQSEER;ELEQHIQT(0.025)S(0.975)DPENFQSEER 176.65 5.650100000000001e-35 69085000.0 9253.8 3531.7 4248.9 4096.1 4229.700000000001 3986.4 3697.1 4031.4 3888.7 4190.8 4135.299999999999 True False 10193.238963712489 3829.328753502228 4537.255904711305 4349.106794081948 3932.620463672849 3953.9360800867057 3837.7951636307475 3950.9905644278824 3725.271462318519 3926.1921727935987 3626.6843158265233 2.810622065788884 1.0558759517037044 1.2510755030183163 1.1991964051303936 1.0843569831846813 1.0902344223433194 1.0582104284298899 1.08942224366927 1.0271838235442137 1.0825844851342727 1.0 11.824435456269518 -5.261385582133551 24.59657643245909 1.0585456161217495 2.8106226701697934 0.9763975406766195 0.07655683354081357 0.3958755597472088 180384.35353300118 0.01241911428811256 0.09898475788162436 5.477904010991213e-06 5.261385582133551 1.752077054048044 ELES(ph)SEEGGSAEER ddPTM_A549_MK2206_60min_R1 2 ELESSEEGGSAEER 14 0 J3KRR1;J3QKQ1;J9JIC5;Q9HAS0 J3KRR1 C17orf75 Protein Njmu-R1 1 ELES(0.99)S(0.01)EEGGSAEER;ELES(0.988)S(0.012)EEGGSAEER 106.3 1.9588e-05 10573600.0 3571.2 4533.299999999999 4656.4 3412.2 3651.9 2551.5 2264.7 2780.6 4319.0 6973.200000000001 8277.3 True False 4173.931252542734 4764.025606710152 5316.747537762052 4248.189153179476 3114.710347642677 2821.498036451376 2676.1666752483775 3174.758565230362 3340.7533960257592 5397.949276902268 6221.817968141628 0.6708539648564212 0.7656967193678765 0.8545328013429638 0.6827890457310104 0.5006109731257532 0.4534845041913238 0.4301261607060021 0.5102622065586755 0.5369416805717955 0.8675839287716356 1.0 12.60312047119285 -10.714852383219311 0.9767873644868715 0.999403093870122 0.5992675555818919 0.4789491128939607 0.13181092568677527 0.3630063907767628 0.6169520235830025 0.10004427201590661 0.026156799188283092 1.9281801906500706e-11 10.714852383219311 -0.4001355382882301 ELESPLT(ph)PGK ddPTM_A549_MK2206_60min_R1 2 ELESPLTPGK 10 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELES(0.002)PLT(0.998)PGK;ELESPLT(1)PGK 167.18 6.2904e-10 116807000.0 13194.599999999999 15862.8 14857.1 13004.599999999999 19556.0 15732.0 14040.3 15407.3 20858.5 19015.5 18870.6 True False 15421.525903001886 16670.148764503076 16964.0601845384 16190.72758379867 16679.338305676545 17396.74979794358 16591.240769413067 17591.331957877333 16134.083054179977 14719.885343161688 14184.509217934998 1.0872089873580395 1.1752362036907993 1.195956795113427 1.1414372774580734 1.1758840612255423 1.2264611718780514 1.1696732339836602 1.2401791057835632 1.1374438696673357 1.0377437186582217 1.0 13.792028613975582 -10.064500122932955 0.7767973281323712 1.0079153187068866 1.176554281609899 0.6691481682163922 0.04129688891757101 0.23441010018278383 0.2819965423002061 0.020075959678428554 0.00845918419152705 8.619853347090606e-11 10.064500122932955 0.1686389629030125 ELESPLT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 ELESPLTPGK 10 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELESPLT(1)PGK;ELES(0.019)PLT(0.981)PGK 134.13 8.456399999999999e-07 196743000.0 19291.1 18605.2 18684.0 19232.6 21458.2 17366.7 19923.0 20408.1 18249.0 19202.4 21813.0 True False 21249.518270642766 20173.12549895507 19952.008596019212 20420.554021596254 19951.05005877125 17225.271353111035 20681.180667283923 20001.044435655258 17482.05799260696 17989.957186897907 19130.139283999702 1.1107874310364114 1.0545205761166472 1.042962014014551 1.0674545395848656 1.0429119078844422 0.9004258200837103 1.0810784155963515 1.0455252906801349 0.9138489653982192 0.9403986515636384 1.0 14.22355975734242 -6.726882510251002 0.5247488534446434 0.9650296553038924 1.1001581897407642 0.36817593930985304 0.05326031048688777 1.1210904439703149 0.4678735877136262 0.012794401819160573 0.07126954224080584 1.8755018192212377e-07 6.726882510251002 0.13512853443687178 ELESPLT(ph)PGKVCR ddPTM_A549_MK2206_60min_R1 2 ELESPLTPGKVCR 13 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELES(0.004)PLT(0.996)PGKVCR;ELES(0.007)PLT(0.993)PGKVCR 59.861999999999995 0.0033564999999999997 23081000.0 2665.8999999999996 2941.0 2806.0 2533.8999999999996 3451.1000000000004 2635.7 2644.0 2265.9 4524.3 4124.1 3933.4 True False 3115.838745002708 3090.6843379733446 3203.9329935057804 3154.7056137510945 2943.447761644525 2914.608024563937 3124.3805755096537 2587.0982640277175 3499.5532738224942 3192.462945688155 2956.628223682635 1.0538486780464296 1.0453408762105827 1.0836441889589739 1.0669943513634406 0.9955420631067058 0.9857877974707419 1.0567377225460137 0.87501642692342 1.1836298002538912 1.0797647536868114 1.0 11.529737130227254 ELESPLT(ph)PGKVCR ddPTM_A549_PD325901_60min_R1 2 ELESPLTPGKVCR 13 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELES(0.001)PLT(0.999)PGKVCR;ELES(0.005)PLT(0.995)PGKVCR 84.84200000000001 0.00013692 45103000.0 4383.2 4271.0 4242.9 4389.1 4614.6 4403.0 5320.6 5638.8 3474.2 4393.6 5270.8 True False 4828.179237258702 4630.932159075805 4530.848708630375 4660.204738630664 4290.486415505765 4367.143427809999 5523.078344544033 5526.329710446974 3328.1914558559415 4116.187346183533 4622.525014354083 1.0444895857277163 1.0018187342838851 0.9801674830446496 1.0081513294486402 0.9281694316813307 0.9447527951171575 1.194818487167405 1.1955218615986616 0.719994255416917 0.8904629684862176 1.0 12.174465411319561 -8.76484579970199 24.999843569191203 0.8677750773486826 1.0317182401212437 0.34366951826520853 0.10261405309590162 91.62758746401632 672456.8776211068 0.022549205338028355 0.024483092590467798 1.7185184548186318e-09 8.76484579970199 0.16394316277256105 ELEVRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ELEVRSPR 8 1 Q5QPJ9;Q5QPK2;O60762;H0Y368 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ELEVRS(1)PR;ELEVRS(1)PR 66.595 0.0023438 13913000.0 1261.26 1486.71 832.46 970.25 1492.75 1109.0700000000002 833.33 980.5999999999999 1403.56 1551.9399999999998 2019.33 True False 1474.1298531535754 1562.3771887481637 950.5153456072068 1207.9612935561781 1273.168452433968 1226.4310512589173 984.7352742017622 1119.6030529615518 1085.6559010247545 1201.3556761308591 1517.8746303272108 0.9711802435460659 1.0293189948180104 0.6262146600357255 0.7958241539986579 0.8387836696101238 0.8079923247643539 0.6487592944283423 0.7376123367449636 0.7152474119622896 0.7914722679513267 1.0 10.567836920162145 -10.892968538462199 1.1633057381545953 0.9991093629833685 0.7880937992991633 0.0 0.13056344638635914 0.4937548505759207 1.1945886777681842 0.08261273528837651 0.020127744485468516 1.2794739895655485e-11 10.892968538462199 -0.21101556368420515 ELEVRS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ELEVRSPR 8 1 Q5QPJ9;Q5QPK2;O60762;H0Y368 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ELEVRS(1)PR;ELEVRS(1)PR 84.476 0.00088028 23453000.0 2253.67 2099.3999999999996 1862.03 2394.0 2453.3 2495.4300000000003 2199.1000000000004 2641.8 2375.3999999999996 2732.7 2375.0 True False 2482.4609193358324 2276.323805844939 1988.398553096 2541.8719428315194 2280.988671425538 2475.1080454371795 2282.787953893693 2589.107226547991 2275.5701986760128 2560.1568556344996 2082.8900563654374 1.1918348314877603 1.0928679595393702 0.954634425863878 1.2203581917650457 1.0951075715468992 1.1883047009001269 1.0959714109332634 1.2430359531630215 1.0925061511152416 1.2291368177645796 1.0 11.024370974581947 -9.86611293486333 1.0108027941906017 1.0133658845329894 1.1288781901792644 0.0 0.10036253647097049 0.4354943904586782 0.9091299078479259 0.024896026583894802 0.01450481648538026 1.3610906955148137e-10 9.86611293486333 0.11551230564627502 ELFDDPSY(ph)VNVQNLDK ddPTM_A549_MK2206_60min_R1 1 ELFDDPSYVNVQNLDK 16 0 P29353;P29353-6;P29353-2;P29353-7;Q5T188;H0Y539;X6R6D0;P29353-5;P29353-3 P29353 SHC1 SHC-transforming protein 1 1 ELFDDPS(0.004)Y(0.996)VNVQNLDK 63.894 0.001341 1788100.0 348.92 317.53 423.83 391.82 353.08 475.82 242.57 355.62 487.35 570.72 486.93 True False 407.80916572502525 333.69092071971295 483.93546708394666 487.81591758946803 301.1423997222479 526.1709565762467 286.6418291230621 406.0302240405742 376.96600313803066 441.79395561774555 366.01184241566705 1.114196641926931 0.9116943280232765 1.322185271082999 1.332787251827421 0.8227668201518213 1.4375790496382148 0.7831490566841628 1.1093363027840493 1.0299284325066274 1.2070482547830115 1.0 8.515746517841302 -7.779846211457531 24.999683320470634 1.0073978763007347 1.1460484035670089 0.09713627160181837 0.19363388372998486 379.59579853488157 515555.9349911365 0.026373516904350167 0.03647656012395165 1.6601746898217805e-08 7.779846211457531 0.13865052726627414 ELFDDPSY(ph)VNVQNLDK ddPTM_A549_PD325901_60min_R1 2 ELFDDPSYVNVQNLDK 16 0 P29353;P29353-6;P29353-2;P29353-7;Q5T188;H0Y539;X6R6D0;P29353-5;P29353-3 P29353 SHC1 SHC-transforming protein 1 1 ELFDDPS(0.003)Y(0.997)VNVQNLDK;ELFDDPS(0.004)Y(0.996)VNVQNLDK 133.66 1.2997e-10 4751000.0 1018.02 1182.79 970.0699999999999 1598.62 1403.86 1285.94 1400.72 1369.97 1192.8000000000002 1398.1399999999999 1992.7800000000002 True False 1121.3686409732866 1282.467864301866 1035.9047837047926 1697.3631266705606 1305.2577166540814 1275.4677309920476 1454.0251661033953 1342.6448736293264 1142.670764073734 1309.8612017919347 1747.6806932732286 0.6416324476715921 0.733811313037929 0.5927311480248992 0.9712089474946203 0.7468513680319179 0.7298059284520824 0.831974153917186 0.7682438095226015 0.6538212434753329 0.7494854219272158 1.0 10.771225908682013 -10.901458933541877 1.0864097039577174 1.003903578242996 0.7393781322793342 0.019893794685652444 0.12024641233207406 0.35121452387736973 0.7181273739072002 0.0721877958686313 0.0161981190552849 1.2547033757632145e-11 10.901458933541877 -0.2645254459636617 ELFQT(ph)PDHTEESTTDDK ddPTM_A549_MK2206_60min_R1 2 ELFQTPDHTEESTTDDK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.983)PDHT(0.017)EESTTDDK;ELFQT(0.752)PDHT(0.248)EESTTDDK 134.87 2.342e-12 17406300.0 3033.3999999999996 3151.8999999999996 2970.3999999999996 2707.9 4053.1 3616.2 2978.5 3429.9 4853.4 4683.9 4938.5 True False 3545.363760490348 3312.31824714661 3391.647385570054 3371.335621562252 3456.894359109102 3998.8638837607127 3519.65489567152 3916.0988286282145 3754.1126492872045 3625.803736890171 3712.1341543338303 0.9550742546174464 0.892294865819856 0.9136650898272048 0.908193368395993 0.9312417642754797 1.0772412088318877 0.948148625383704 1.0549453941626168 1.0113084530914287 0.9767437237302239 1.0 11.858033134215614 -7.089513300773134 7.881197330131508 1.0092838950653027 0.9157896444049337 0.6242790724516107 0.03535826799237327 0.12718682276208243 10.067486344096972 0.004416199440497182 0.007674946074912625 8.137419386047624e-08 7.089513300773134 -0.09349425066036898 ELFQT(ph)PDHTEESTTDDK ddPTM_A549_PD325901_60min_R1 1 ELFQTPDHTEESTTDDK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.794)PDHT(0.206)EESTTDDK 125.73 1.6872000000000001e-10 16437000.0 3303.1 4046.8 3258.8 2993.9 4404.3 3096.0 3051.6 3548.8 3052.6 3004.5 3443.1 True False 3638.4282803863007 4387.8380382458345 3479.961764756335 3178.8264033597675 4094.9571620101515 3070.787202475528 3167.7303078995924 3478.016400020257 2924.309837702449 2814.7953572488213 3019.620527609194 1.204928979359884 1.4531090904061168 1.152450029047729 1.0527238023105592 1.3561164803884689 1.0169447367304942 1.049049136782649 1.1518057875881513 0.9684362028157862 0.9321685726773938 1.0 11.560151543704341 -6.874050303302173 0.43551529542444717 0.9795438273501823 1.3501054378861015 0.4876706952300268 0.11188923892098708 0.954857453505615 0.2773813239060212 0.02914126391800395 0.14790055338820343 1.336440710816094e-07 6.874050303302173 0.3705616105359192 ELFQT(ph)PDHTEESTTDDKTTK ddPTM_A549_MK2206_60min_R1 2 ELFQTPDHTEESTTDDKTTK 20 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PDHTEESTTDDKTTK;ELFQT(1)PDHTEESTTDDKTTK 180.83 7.024199999999999e-37 35098000.0 4337.8 4888.6 5118.6 4341.5 6464.700000000001 5336.5 4610.3 5184.3 7870.8 7894.2 7967.1 True False 5069.914590972184 5137.408859101151 5844.494447811363 5405.167694897342 5513.751193736308 5901.2048879179965 5447.931833310191 5919.190401252882 6088.07636708487 6110.89473723999 5988.6491892260965 0.8465873406131776 0.8578577065999504 0.975928671581886 0.9025687636907386 0.9207003147981759 0.9853983263094761 0.9097096291950637 0.9884015934514624 1.016602605148027 1.0204128751161146 1.0 12.548014907412954 -3.3492076937710413 0.22990880989068752 1.0173618337157824 0.4513987193608644 0.6857505815033491 0.03344274544127594 10.245799944480357 0.2072804738990446 0.020441785597474917 1.9420097812653776 0.000447499244276599 3.3492076937710413 -0.565963114354918 ELFQT(ph)PDHTEESTTDDKTTK ddPTM_A549_PD325901_60min_R1 2 ELFQTPDHTEESTTDDKTTK 20 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PDHTEESTTDDKTTK;ELFQT(1)PDHTEESTTDDKTTK 218.93 2.626199999999999e-67 58181000.0 9254.2 10226.7 10477.6 10423.6 12356.5 9666.2 9261.099999999999 9821.4 10066.5 9828.1 11319.9 True False 10193.679571418035 11088.53989960677 11188.672942927149 11067.442098286798 11488.622067610842 9587.481672018395 9613.536228368373 9625.504472260754 9643.440012196726 9207.552088725957 9927.62406275837 1.0267995148665754 1.1169379329343623 1.1270242378435107 1.1148127717491079 1.157237823973237 0.9657377849332596 0.9683622352735698 0.9695677849415187 0.9713744145864963 0.9274678443220238 1.0 13.277232769483389 -7.269887481612755 24.992857860040324 0.9819515167921948 1.1104006553362373 0.7974003453831606 0.035069314938115645 195.81881916789936 579309.6018732806 0.0046357483489978275 0.007482015870308942 5.371709502911395e-08 7.269887481612755 0.1284491385440425 ELFQT(ph)PGHTEEAVAAGK ddPTM_A549_MK2206_60min_R1 2 ELFQTPGHTEEAVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.999)PGHT(0.001)EEAVAAGK;ELFQT(1)PGHTEEAVAAGK 195.03 4.707799999999999e-48 113488000.0 5725.0 6363.4 6202.2 5772.700000000001 8577.4 7349.700000000001 6151.7 6454.4 9234.2 8324.6 9088.0 True False 6691.240037188384 6687.269879721039 7081.765221782447 7187.011759146351 7315.675822413072 8127.440375663986 7269.384261105422 7369.330965770997 7142.668443987284 6444.067078314212 6831.198783959873 0.9795118322277311 0.978930652028925 1.0366797169496693 1.052086461899184 1.0709212326818514 1.1897531652493816 1.0641447410627896 1.0787756583917152 1.0455951685608627 0.9433288771284664 1.0 12.737923059065427 -5.795647523604917 4.343874981776673 1.046195770117313 0.977998642362957 0.19595103986008988 0.0567054876258188 0.25521698854484565 10.580760133686983 0.007776050309650441 0.028168205716966523 1.6008567678979517e-06 5.795647523604917 -0.06819712775435605 ELFQT(ph)PGHTEEAVAAGK ddPTM_A549_PD325901_60min_R1 3 ELFQTPGHTEEAVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.994)PGHT(0.006)EEAVAAGK;ELFQT(1)PGHTEEAVAAGK;ELFQT(1)PGHTEEAVAAGK 250.81 4.944499999999999e-86 158379000.0 13570.2 13830.7 15714.0 14748.7 17339.1 16580.5 15911.4 16955.7 16633.0 15571.3 17368.4 True False 14947.836714146757 14996.261627845864 16780.446535958356 15659.693702272014 16121.261432647689 16445.473905247243 16516.91703405216 16617.505262010676 15933.972852815585 14588.125460585314 15232.19690735893 0.9813316362083795 0.984510751735419 1.1016432257287483 1.0280653406408207 1.058367452226096 1.0796521345717478 1.084342405400009 1.0909460639904465 1.0460718798296007 0.9577164442732188 1.0 13.89483641321827 -4.1490428605555705 11.546557622464828 1.0365205623951854 0.5874700836570066 0.0 0.04794413530068875 0.0 27239335.512541387 0.006028713025704089 0.0 7.095077431347382e-05 4.1490428605555705 -0.4490504787381788 ELFQT(ph)PGHTEELVAAGK ddPTM_A549_MK2206_60min_R1 2 ELFQTPGHTEELVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.999)PGHT(0.001)EELVAAGK;ELFQT(0.913)PGHT(0.087)EELVAAGK 225.74 1.1897999999999998e-63 60517000.0 3906.7000000000003 4660.8 3563.9 3482.0 6204.0 5105.6 4776.8 4568.0 5971.700000000001 6142.4 6502.9 True False 4566.055450355257 4898.01481211362 4069.314609962672 4335.090156312918 5291.399818389102 5645.87120317701 5644.682728099287 5215.52798891329 4619.119484845341 4754.827573917931 4888.050459090303 0.9341260873982525 1.00203851271723 0.8325025782814847 0.8868750829384249 1.0825174295303541 1.155035376665842 1.154792237793265 1.0669955297237117 0.9449819562020209 0.9727451902783414 1.0 12.255043462761366 -6.7466374108775256 24.990455619742793 1.0147023120630398 0.9143691204822231 0.36185597041810547 0.079214235706168 307.4986499973858 519153.0636658032 0.013560302395704786 0.028134487897122043 1.7921014413303e-07 6.7466374108775256 -0.10033319158081677 ELFQT(ph)PGHTEELVAAGK ddPTM_A549_PD325901_60min_R1 2 ELFQTPGHTEELVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.992)PGHT(0.008)EELVAAGK;ELFQT(1)PGHTEELVAAGK 212.55 4.3956e-55 103157000.0 4781.4 5922.799999999999 5868.200000000001 5898.5 6568.6 4930.3 5386.3 5768.5 6058.700000000001 5785.1 7029.299999999999 True False 5266.804208119355 6421.93514206841 6266.451340353243 6262.836948534548 6107.244196439815 4890.149271435754 5591.278593996457 5653.442742199293 5804.073908696793 5419.827798708655 6164.740662404028 0.8543431908237792 1.0417202431941532 1.0164987764318298 1.0159124757232312 0.9906733358120224 0.7932449293866599 0.9069770976896308 0.9170609198010696 0.9414952268946563 0.8791655797885772 1.0 12.589824489438902 -5.2263144783868265 22.651170642919517 0.963024135662377 0.8543423967663549 0.10820462685219634 0.07106725688857403 6726.819185364785 4337687.306494081 0.009553842383299486 2.1220336374950337 5.938619795597503e-06 5.2263144783868265 -0.10868173889602206 ELFQT(ph)PGHTEES(ph)MTDDKITEVSCKSPQPESFK ddPTM_A549_PD325901_60min_R1 1 ELFQTPGHTEESMTDDKITEVSCKSPQPESFK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 ELFQT(0.999)PGHT(0.006)EES(0.3)MT(0.258)DDKIT(0.178)EVS(0.143)CKS(0.116)PQPESFK 65.71 0.00032592 6443900.0 1797.5 1728.5 2252.3 1912.1 1802.6 2127.9 2340.4 3046.3 2219.6 2164.4 1824.9 True False 1979.9808767504392 1874.1667611712785 2405.154622180157 2030.2060743058253 1675.991594632403 2110.571087902996 2429.4652027160205 2985.5391567238808 2126.3179308669196 2027.739414621184 1600.4488689942266 1.2371409765778538 1.1710257025262325 1.502800038648928 1.2685229210613094 1.047200961618755 1.3187369673542566 1.51798989007551 1.8654386369744442 1.3285759839382847 1.2669816911398617 1.0 10.644260871182073 -10.289773241317203 1.0644395925953256 1.029238482131952 1.3585570766389312 0.10582266385641659 0.21742133532558558 0.47333589017249417 1.0584069271059247 0.09147941715978658 0.040248498122780724 5.1312923482264795e-11 10.289773241317203 0.3293185945069792 ELFQT(ph)PGTDKPTTDEK ddPTM_A549_MK2206_60min_R1 4 ELFQTPGTDKPTTDEK 16 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.856)PGT(0.129)DKPT(0.006)T(0.008)DEK;ELFQT(0.97)PGT(0.028)DKPT(0.001)TDEK;ELFQT(0.646)PGT(0.274)DKPT(0.07)T(0.011)DEK;ELFQT(0.559)PGT(0.372)DKPT(0.059)T(0.009)DEK 166.06 1.5754000000000002e-21 80592000.0 19810.1 22535.8 20898.7 20385.4 27608.0 22934.6 21238.3 21993.4 31275.000000000004 30455.2 32612.1 True False 23153.560569555553 23682.775961815612 23862.449911396732 25379.823915135377 23546.899772096454 25361.52414924463 25097.024196991908 25111.03180196268 24191.2624359124 23575.34916794498 24513.61552182854 0.9445183860756117 0.9661070167608246 0.9734365740601599 1.035335807259256 0.9605641302128094 1.0345892929038174 1.0237993728278827 1.024370794247065 0.9868500390883141 0.9617246850817227 1.0 14.581295663049652 -5.921332943642463 2.98984341898035 1.0008473819515769 0.9541357242719405 0.3564450390577386 0.025386534404661914 0.19484009584466128 3.467057540481759 0.003109081783700954 0.011582002500767978 1.1985800821143308e-06 5.921332943642463 -0.046711657679636365 ELFQT(ph)PGTDKPTTDEK ddPTM_A549_PD325901_60min_R1 2 ELFQTPGTDKPTTDEK 16 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.999)PGT(0.001)DKPTTDEK;ELFQT(0.549)PGT(0.012)DKPT(0.423)T(0.016)DEK 189.15 9.4995e-35 147734000.0 28161.0 29285.0 29992.0 28087.0 33604.0 27695.0 31498.0 29964.0 32458.0 33194.0 33879.0 True False 31019.883988967504 31752.949725716437 32027.437476547224 29821.870199794823 31243.77096750656 27469.46110224797 32696.67362636694 29366.34451369674 31093.903135735487 31098.12517507653 29712.097776675655 1.0440152769461628 1.068687575154753 1.0779258239278258 1.003694536277588 1.0515504897144383 0.9245210926780073 1.100449852855365 0.9883632160348389 1.0465064893581686 1.0466485876836646 1.0 14.858762847569137 -6.259696270819386 24.98352248709352 1.0197810538600687 1.0640573613188002 0.16794210158093448 0.04293751421774352 186.58668860807038 2674250.1609406048 0.0054294732848974145 0.013626990479090719 5.499253364417358e-07 6.259696270819386 0.04427630745873157 ELFQT(ph)PICTDKPTTHEK ddPTM_A549_MK2206_60min_R1 2 ELFQTPICTDKPTTHEK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PICTDKPTTHEK;ELFQT(1)PICTDKPTTHEK 127.5 3.3959e-12 23810000.0 2599.1 2976.1 2138.5 2741.3999999999996 3152.5 2855.5 2883.4 3042.1 4357.299999999999 3752.4 3775.7 True False 3037.764538105908 3127.5707780491202 2441.7714563835048 3413.0431230661234 2688.7714260914995 3157.6671146725057 3407.27645666586 3473.326991040523 3370.3785071782927 2904.7302338450168 2838.0894859812192 1.0703554461939928 1.101998648561928 0.8603574582283847 1.202584745803434 0.9473878252862433 1.1126030839654086 1.2005528625845476 1.223825749045993 1.1875518808784298 1.0234808480116537 1.0 11.470704363470704 -7.4270631771847055 24.99998622220921 1.1127468476764955 1.0386487949026888 0.14647994187163016 0.10371919362941238 100.82785646413953 26299.24386792991 0.016785371177824002 0.026833269958134873 3.7405617004736116e-08 7.4270631771847055 -0.07409805277380666 ELFQT(ph)PICTDKPTTHEK ddPTM_A549_PD325901_60min_R1 2 ELFQTPICTDKPTTHEK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PICTDKPTTHEK;ELFQT(1)PICTDKPTTHEK 111.13 2.7357e-09 33411000.0 4119.200000000001 3156.4 3853.8 3521.0 3787.9 3393.5 3701.7 3248.1 3236.9 3217.5 3195.3999999999996 True False 4537.378151605231 3422.4009053867644 4115.342042781998 3738.4841732288132 3521.8509715455916 3365.8644611113405 3842.570219147966 3183.3140974148428 3100.8643496229647 3014.346500898016 2802.386057309523 1.6191124487542647 1.2212453371511907 1.4685136018457787 1.3340361023698522 1.2567329766573285 1.2010709417897953 1.3711780392017396 1.1359298941385099 1.1065086273659244 1.075635704451081 1.0 11.452440000102666 -2.0000000046855373 0.10711333347162004 0.8386505190789619 2.822333380768865 0.678314895784853 0.09903242219071917 34.48681865955913 0.25054670627568165 0.4647109203085753 10.143024416633208 0.009999999892111517 2.0000000046855373 1.983682861689903 ELFQT(ph)PVCTDKPTTHEK ddPTM_A549_MK2206_60min_R1 2 ELFQTPVCTDKPTTHEK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PVCTDKPTTHEK;ELFQT(1)PVCTDKPTTHEK 114.37 9.5184e-10 30497000.0 3351.8999999999996 3891.6 3533.1 2931.1000000000004 4629.6 3869.8 3804.6000000000004 4148.2 5218.4 5369.700000000001 5912.700000000001 True False 3917.6187739129655 4089.665817632459 4034.146706826544 3649.21963158208 3948.591972794037 4279.299667434656 4495.846572459916 4736.2200533297055 4036.440732072431 4156.681040581387 4444.413407781645 0.8814703796576789 0.9201812348221107 0.9076893476568195 0.8210801509132174 0.8884393980723118 0.9628491489882794 1.011572542866561 1.0656569537471787 0.908205506941613 0.9352597652827541 1.0 12.117777303373071 -7.266122479444215 5.392169712907838 0.9698533562864711 0.8832871553138575 0.5236886553916791 0.045400686326817936 0.14277620265117008 14.741142883446573 0.007874912464403422 0.013174199689713267 5.4184805721887634e-08 7.266122479444215 -0.08656620097261358 ELFQT(ph)PVCTDKPTTHEK ddPTM_A549_PD325901_60min_R1 2 ELFQTPVCTDKPTTHEK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PVCTDKPTTHEK;ELFQT(1)PVCTDKPTTHEK 126.51 4.8659e-11 47563000.0 5027.3 5438.299999999999 6408.7 5010.5 7126.2 5791.9 5799.0 6589.1 5610.5 5895.6 6730.6 True False 5537.667795097346 5896.604626715512 6843.632920643773 5319.987205328871 6625.680296055381 5744.732686698327 6019.684118334558 6457.675231451045 5374.710196039312 5523.350809850608 5902.778868788721 0.9381459001247835 0.9989540109479864 1.159391715795059 0.9012682540859874 1.1224679838658775 0.973225122335842 1.0198051209683594 1.0940059546523706 0.9105389707987195 0.9357204348371645 1.0 12.527178580898267 -8.771963046459714 24.999118082114325 0.9577545185758073 1.0265634838470767 0.16809429450699298 0.07571388135276069 287.76487877186617 683587.4490266822 0.012640098828102573 0.013524208978782261 1.6905847751351744e-09 8.771963046459714 0.06880896527126945 ELFQTPDHT(ph)EESTTDDK ddPTM_A549_PD325901_60min_R1 1 ELFQTPDHTEESTTDDK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.275)PDHT(0.725)EESTTDDK 170.91 7.052699999999999e-30 14795000.0 2510.3 3260.7 2843.7 2770.5 2944.7 2536.4 2446.3 2571.3 2677.6 2596.4 3405.4 True False 2765.143808014812 3535.490632427643 3036.6905825572594 2941.6274927379795 2737.8744306635094 2515.744399340739 2539.3952851667254 2520.0134043541716 2565.069783604821 2432.462860895605 2986.557388609205 0.9258632760787154 1.1838013379257606 1.0167862818036792 0.9849559576378512 0.9167325701176284 0.8423559543626528 0.8502750674914316 0.8437853610198677 0.8588717542773674 0.814470490395755 1.0 11.544267729015383 -6.462522799808788 2.2450667935459534 0.9107749308852735 1.0584075915495614 0.4379398405094471 0.07828192871589637 0.2592078651951142 2.5580864918855295 0.012090201360957528 0.03231765225677716 3.447285083685484e-07 6.462522799808788 0.14763266066428793 ELFQTPGHTEES(ph)MTDDKITEVSCKSPQPDPVK ddPTM_A549_MK2206_60min_R1 1 ELFQTPGHTEESMTDDKITEVSCKSPQPDPVK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQTPGHT(0.001)EES(0.212)MT(0.212)DDKIT(0.191)EVS(0.191)CKS(0.191)PQPDPVK 50.028999999999996 0.0018041 5582500.0 2128.1 2355.4 2673.4 1899.4 2815.6 2673.0 2451.4 2555.9 3538.4 3394.6 4035.7 True False 2487.2712529503233 2475.2797992731753 3052.5283196145224 2364.7530852673062 2401.4289698027656 2955.8550858062026 2896.7876485644333 2918.2066521154698 2736.958049663707 2627.757502347908 3033.5243103462676 0.8199279117253584 0.8159749341157018 1.00626466358072 0.779539849805053 0.7916300395590532 0.9743963731310268 0.9549248175412756 0.9619855829612143 0.9022370581732017 0.8662391441484633 1.0 11.566779157686277 -7.273383079449944 24.854802656892378 0.9548145385264674 0.8467662017482325 0.358931773440455 0.065888432420465 539.7610297337116 1123239.519908272 0.009625496671826625 0.015459057877310774 5.32864662580259e-08 7.273383079449944 -0.10804833677823489 ELFQTPGHTEESMTDDKIT(ph)EVSCKSPQPDPVK ddPTM_A549_PD325901_60min_R1 1 ELFQTPGHTEESMTDDKITEVSCKSPQPDPVK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQTPGHTEES(0.061)MT(0.061)DDKIT(0.316)EVS(0.28)CKS(0.28)PQPDPVK 64.79 0.00027697 12382000.0 1714.5 1905.3 1499.9 2002.6 1930.6 1589.4 1986.3 2328.1 2004.4 2150.5 2087.1 True False 1888.554777851808 2065.866317650931 1601.6922336314071 2126.296053765412 1795.0013162084306 1576.4564533638904 2061.889733445066 2281.6642191408823 1920.1620384887601 2014.717062993374 1830.3999312169697 1.0317716612872538 1.1286420428771584 0.8750504227600672 1.1616565415579487 0.9806607209687755 0.8612633919384814 1.1264695208299025 1.2465386281040136 1.0490396146442764 1.1006977374905484 1.0 10.837943187677228 ELFQTPGHTEESMTDDKIT(ph)EVSCKSPQPESFK ddPTM_A549_PD325901_60min_R1 2 ELFQTPGHTEESMTDDKITEVSCKSPQPESFK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQTPGHTEES(0.072)MT(0.072)DDKIT(0.285)EVS(0.285)CKS(0.285)PQPESFK;ELFQTPGHTEES(0.017)MT(0.017)DDKIT(0.341)EVS(0.341)CKS(0.283)PQPES(0.001)FK 87.75299999999999 1.9189e-09 38668000.0 3552.2 3679.8 4042.8999999999996 4573.8 4283.9 4193.5 3940.2999999999997 4301.2 3166.7 4301.200000000001 4036.7 True False 3912.8167290085707 3989.9096602592217 4317.275505932673 4856.313238146531 3983.0136426526983 4159.349526350494 4090.2502727148944 4215.409191773877 3033.6146114958888 4029.6214979526176 3540.211490749625 1.1052494290899124 1.1270257922964864 1.2194964953968068 1.3717579446413883 1.1250778810983724 1.1748873018514971 1.1553689047681162 1.1907224194906167 0.8569020860540547 1.1382431553826073 1.0 11.789619833541469 -8.751462800669081 24.99356591123586 0.9324259852942528 1.186079127118268 0.37499620115220433 0.09679219047856016 88.57794390095196 221907.39666394037 0.014359849379351836 0.016188566986391963 1.7722998443121468e-09 8.751462800669081 0.2536531418240152 ELFQTPGHTEESMTDDKITEVS(ph)CKSPQPESFK ddPTM_A549_MK2206_60min_R1 2 ELFQTPGHTEESMTDDKITEVSCKSPQPESFK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQTPGHTEESMTDDKIT(0.083)EVS(0.458)CKS(0.458)PQPES(0.001)FK;ELFQTPGHTEES(0.001)MT(0.001)DDKIT(0.079)EVS(0.457)CKS(0.457)PQPES(0.005)FK 119.97 8.7779e-22 16139900.0 3313.8 3644.8 4468.8 4172.9 5226.5 4164.6 4223.9 3791.5 5509.6 6203.0 5924.0 True False 3873.0884253685344 3830.30475180049 5102.543036841992 5195.260687328601 4457.688773502687 4605.295207762256 4991.327954952804 4328.95673598177 4261.684397023279 4801.737991829398 4452.907305917506 0.8697886929336154 0.8601806614546783 1.1458902434508753 1.1667120670633713 1.0010737855645067 1.03422211408763 1.1209144076095603 0.9721641252736124 0.9570566158787746 1.078337738009576 1.0 12.120531864849593 ELFQTPGHTEESMTDDKITEVS(ph)CKSPQPESFK ddPTM_A549_PD325901_60min_R1 1 ELFQTPGHTEESMTDDKITEVSCKSPQPESFK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQTPGHTEESMTDDKIT(0.076)EVS(0.462)CKS(0.462)PQPESFK 142.04 2.0293e-40 9686600.0 1573.2 2820.9 2469.0 2213.1 2333.2 2145.9 2163.6 2519.9 2418.1 2793.7 2354.6 True False 1732.9101058713704 3058.6271429494104 2636.561187303116 2349.798160685226 2169.324081103031 2128.4245018708784 2245.9369819673475 2469.6386176766937 2316.475666169263 2617.3053052241753 2064.9991270391833 0.8391820040892872 1.4811759980426245 1.2767856183471826 1.1379172658801024 1.050520580225828 1.030714480215125 1.087621274294481 1.195951410021992 1.121780457840023 1.2674607320424847 1.0 11.01192545641988 -14.999999999314891 0.11278155993129171 0.5107634859666952 1.2300333414920346 0.0 0.17136985738489835 138.77651036813677 1.1034347733953898 15.580730031799519 0.6868701754514427 1.0000000015775215e-15 14.999999999314891 0.7192698555253394 ELGDS(ph)LRR ddPTM_A549_PD325901_60min_R1 1 ELGDSLRR 8 1 H3BTQ3;P41440-3;P41440;P41440-2 H3BTQ3 SLC19A1 Folate transporter 1 1 ELGDS(1)LRR 45.161 0.021901 11767000.0 1405.4 1931.0 1035.6 1509.7 1230.5 1248.0 687.44 1282.0 687.36 1381.2 974.37 True False 1548.0751733992026 2093.73214684509 1105.882043568694 1602.950740222532 1144.0739249945489 1237.8367017730816 713.6009053816024 1256.4295042904562 658.4726495587876 1293.9907962829336 854.5286670403331 1.811612919623836 2.450160220015495 1.2941427083996202 1.8758302700064642 1.338836213601889 1.4485607674934289 0.8350812944089575 1.4703187297883287 0.7705682383241897 1.514274296688818 1.0 9.73898508086069 -6.788451901257496 0.5417930932312227 0.8970437072035241 2.1637151703454425 0.41635970837747016 0.35640544762590376 0.51837043157722 0.2393542887410562 0.060632367245057446 0.3108872447849714 1.6276015648898505e-07 6.788451901257496 1.2666714631419183 ELGDVS(ph)AREDR ddPTM_A549_PD325901_60min_R1 2 ELGDVSAREDR 11 1 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2;K7EPU8 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 ELGDVS(1)AREDR;ELGDVS(1)AREDR 51.54600000000001 0.0068035 4959700.0 643.46 1097.3000000000002 1096.98 1108.0 868.74 895.0500000000001 1150.21 742.3900000000001 866.75 939.5799999999999 1064.38 True False 708.783585509784 1189.7733219746851 1171.4276594766193 1176.4386435494246 807.7226993902999 887.7610095528819 1193.9818709690624 727.5824490563114 830.323511704317 880.2547584502745 933.4680076607347 0.7593014218944594 1.2745732175184559 1.254919986398045 1.2602881233150913 0.8652923214952468 0.9510352816242795 1.279081726604829 0.7794401555117338 0.8895039839502403 0.9429940300323605 1.0 9.866456768219642 -6.764106867884889 24.99972888998479 0.9547149482378937 1.1554815331210857 0.18981396890116387 0.17642912910423494 78.18966831940699 732805.428740263 0.024302505021231408 0.04746442744583158 1.7214449227822676e-07 6.764106867884889 0.200766584883192 ELGEGEPPAPAHWPPLS(ph)AGAR ddPTM_A549_PD325901_60min_R1 1 ELGEGEPPAPAHWPPLSAGAR 21 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 ELGEGEPPAPAHWPPLS(1)AGAR 47.018 0.0048896 4049000.0 696.71 1011.1 639.85 683.83 943.58 771.56 793.23 953.29 1285.9 930.8 1020.2 True False 767.4394863092058 1096.308945455759 683.2740687306189 726.0686260093885 877.3061959742837 765.2766711699023 823.4168017221118 934.2758831084622 1231.8580948377064 872.0291291486778 894.72186758064 0.8577408400494219 1.225306975474085 0.7636720342805708 0.81150204585108 0.9805351000826112 0.8553235356136292 0.9203047690660119 1.0442081689975653 1.3768056191235103 0.9746371031555044 1.0 9.805295466985855 -8.524838614756638 24.599449474635804 1.1796502552747472 0.9230002888122024 0.2318021831206103 0.15211777340609203 45.499696853507366 571085.8679684096 0.028671546785316207 0.03262418818476157 2.9864922029681027e-09 8.524838614756638 -0.2566499664625448 ELGEY(ph)GFHEYTEVK ddPTM_A549_MK2206_60min_R1 2 ELGEYGFHEYTEVK 14 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 ELGEY(1)GFHEYTEVK;ELGEY(1)GFHEYTEVK 167.32 2.6431e-21 19663700.0 5809.8 6060.5 5049.3 4839.3 6692.1 5431.2 5017.6 5193.5 7571.9 8250.599999999999 7712.1 True False 6790.352204027438 6368.953563511545 5765.366665755077 6024.928717244433 5707.700954971262 6005.925979061223 5929.232971133596 5929.6945294267 5856.876739839653 6386.783729709442 5796.972726868062 1.1713617648320507 1.0986688852256354 0.9945478333947483 1.0393232814982605 0.9846002774028867 1.0360452363739259 1.0228153987429558 1.0228950193164603 1.0103336716928037 1.1017446571911058 1.0 12.501083982814661 -5.535274368371909 2.7106035272449507 1.00974451473103 1.1703589103281393 0.6403962308848077 0.03262882761304313 0.06116443728189002 0.8075101681654485 0.002295922181146854 0.016535865750305447 2.9155844925280274e-06 5.535274368371909 0.16061439559710933 ELGEY(ph)GFHEYTEVK ddPTM_A549_PD325901_60min_R1 1 ELGEYGFHEYTEVK 14 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 ELGEY(0.831)GFHEY(0.169)TEVK 162.93 4.9902999999999995e-43 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ELGEYGFHEYTEVK ddPTM_A549_MK2206_60min_R1 3 ELGEYGFHEYTEVK 14 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;; 182.33 6.1436e-26 125384800.0 7595.4 8012.92 7884.9 7796.0 10664.6 8874.599999999999 7013.2 8205.8 10469.1 12211.099999999999 11971.5 False True 8877.317830298804 8420.74340205147 9003.097384352724 9706.020349975734 9095.85146731019 9813.704281517294 8287.407659668797 9368.99727920855 8097.865565717366 9452.604029022732 8998.646153408417 0.986517047004492 0.935778922572919 1.0004946556257934 1.0786089578930032 1.0108022153826945 1.0905756392921568 0.9209616111563378 1.0411563161264936 0.8998982099824135 1.0504473526211906 1.0 13.135492248917176 -8.203543460010696 1.763710358638672 0.9555250716933578 1.0118208618142395 0.0 0.062470059949400414 0.520140876792067 3.1630528140952214 0.010523055542045197 0.013862014725894645 6.258302337229999e-09 8.203543460010696 0.056295790120881706 ELGEYGFHEYTEVK ddPTM_A549_PD325901_60min_R1 2 ELGEYGFHEYTEVK 14 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 228.25 4.0353999999999997e-47 109866000.0 11505.6 11105.0 12401.8 13292.3 15044.7 13701.2 14165.0 14506.6 14787.8 14992.8 14724.1 False True 12673.64004202495 12040.857323000888 13243.46072608172 14113.335181996395 13988.012173397394 13589.62196981838 14704.056826385426 14217.254482792461 14166.320191959727 14046.15204931274 12913.129043760146 0.9814538365624929 0.932450785723329 1.0255810718844474 1.0929446406187826 1.083239556113369 1.052387993937467 1.1386904581032347 1.10099220991387 1.0970478296896713 1.0877419409124616 1.0 13.656551009081891 -5.935955472222154 4.626240709732026 1.062936544270914 0.9582873277010635 0.5938679878738342 0.03770581044543881 0.14578538470451213 6.19672155493529 0.006726966857509862 0.022008002851327355 1.1588961705266255e-06 5.935955472222154 -0.10464921656985049 ELGFDAS(ph)EVELTR ddPTM_A549_MK2206_60min_R1 1 ELGFDASEVELTR 13 0 O00622 O00622 CYR61 Protein CYR61 1 ELGFDAS(1)EVELTR 137.46 1.3133e-08 3111300.0 1714.5 2227.5 1768.0 1625.2 2460.4 1872.7 2326.8 2083.0 2538.3 2571.3 2552.8 True False 2003.8656844994719 2340.870235578246 2018.7289852167573 2023.3740729579997 2098.4784192721722 2070.8678710023473 2749.5494414129585 2378.2716289199593 1963.3791028321812 1990.441544154592 1918.869306304223 1.044295032452707 1.219921663183411 1.052040896471926 1.0544616385860353 1.0936015352259083 1.0792125676296715 1.4329008402915362 1.239413034075027 1.0231958457940447 1.0372991728072498 1.0 10.906040737952695 -8.865983522595851 7.922679889619108 1.0102802608589523 1.1525100351040702 0.22248361553272566 0.10948708745188301 0.25090356010082127 17.228427524617192 0.019749872541296728 0.020984822272498278 1.361496337508236e-09 8.865983522595851 0.14222977424511796 ELGFDAS(ph)EVELTR ddPTM_A549_PD325901_60min_R1 1 ELGFDASEVELTR 13 0 O00622 O00622 CYR61 Protein CYR61 1 ELGFDAS(1)EVELTR 148.48 1.1758e-12 6152300.0 3271.5 3569.5 3502.4 3339.7 4042.6 3847.0 3748.3 4265.1 3422.9 3350.8 3936.6 True False 3603.620271648989 3870.314292161338 3740.0939256421375 3545.985683990984 3758.661722212888 3815.6713074687855 3890.943607648463 4180.029234593777 3279.0474164553884 3139.2299161488936 3452.423156163444 1.0437944911867538 1.1210428493540407 1.083324307730102 1.0271005388376298 1.0887025003011959 1.1052154196848238 1.1270181642427435 1.2107522877464696 0.949781434121557 0.9092830670378798 1.0 11.753393588079318 -8.791112057889135 24.999608857868363 0.9762856554638406 1.099108564640036 0.620853301470988 0.050558822455164014 104.65002327355118 88168.52319594585 0.008407765464824343 0.008951351065857238 1.6176625899183917e-09 8.791112057889135 0.12282290917619543 ELGITALHIK ddPTM_A549_MK2206_60min_R1 2 ELGITALHIK 10 0 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 ; 91.584 0.00068571 6932100.0 1691.1 2065.34 1842.1599999999999 1602.9 3090.9 2007.67 1688.53 1789.92 2682.2 2795.4 2284.8900000000003 False True 1976.5163365745452 2170.456984219608 2103.4059883523187 1995.6105719569148 2636.2327044904723 2220.120306816513 1995.3140443136572 2043.6466414001036 2074.68598259326 2163.9171985103844 1717.488753244068 1.150817630008473 1.2637386883145252 1.2246985515214077 1.161935161547648 1.5349344789076729 1.2926549315813876 1.1617625096786344 1.1899039440811325 1.2079764590449296 1.2599309278870576 1.0 10.746084936432021 -10.27494761534807 0.47900821997089205 0.97129566918175 1.262969233812749 0.0 0.12561993095962426 0.894689871661616 0.34331628300761236 0.11796914082380391 0.028013939868733715 5.309484834377637e-11 10.27494761534807 0.2916735646309989 ELGITALHIK ddPTM_A549_PD325901_60min_R1 2 ELGITALHIK 10 0 P62263;A0A2R8Y811;E5RH77 P62263 RPS14 40S ribosomal protein S14 0 ; 95.573 0.00059596 8292700.0 2649.6 3265.7 3167.3 2759.8999999999996 4161.6 3413.5 3058.7 3359.6 3651.2 4020.1000000000004 4049.4 False True 2918.585441467572 3540.911999975147 3382.2520245221367 2930.372754812324 3869.3035727406027 3385.7015877423164 3175.1005022848617 3292.590142444784 3497.752761390023 3766.270199925444 3551.349471261559 0.821824341728552 0.9970609844593232 0.9523850164260649 0.8251434499830728 1.0895305021519315 0.953356355137756 0.89405464823403 0.9271377455497628 0.9849080721834743 1.0605180454368346 1.0 11.794151620703365 -2.0000000000051914 0.11821906756168168 1.0235119127005832 0.6421551868827681 0.2146264248642864 0.07220410207768552 116.45285370088443 0.9152847549719698 0.2529557722905783 7.345804112601588 0.009999999999880464 2.0000000000051914 -0.3813567258178151 ELGPLPDDDDMAS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ELGPLPDDDDMASPK 15 0 Q86U86-8;Q86U86;E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;H0Y5B5;Q86U86-6 Q86U86-8 PBRM1 Protein polybromo-1 1 ELGPLPDDDDMAS(1)PK 85.493 1.2442e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ELGPLPDDDDMAS(ph)PKLK ddPTM_A549_MK2206_60min_R1 1 ELGPLPDDDDMASPKLK 17 1 Q86U86-8;Q86U86;E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;H0Y5B5;Q86U86-6 Q86U86-8 PBRM1 Protein polybromo-1 1 ELGPLPDDDDMAS(1)PKLK 65.25 0.00069426 1431600.0 1641.0 1678.7 1580.2 1233.4 2236.9 1855.3 1467.9 1784.0 2481.8 2439.6 2806.1 True False 1917.960681401946 1764.1386596925722 1804.2961212893204 1535.583055369429 1907.8549732035126 2051.626614551533 1734.5984291946359 2036.8874632708635 1919.676262620222 1888.4926656242149 2109.2679255798653 0.909301591392034 0.8363748570289322 0.8554134348737588 0.7280170701629938 0.9045104939331111 0.9726723616619325 0.8223698886985977 0.9656845574565386 0.9101149452564107 0.89533085992622 1.0 11.042526646913153 -9.364640831165595 0.2486973144402498 1.0301723962842921 0.8272963713362385 0.17078871171779897 0.06756307454041117 1.6908013736844592 0.3009874594926314 0.12382256688600059 0.06789376589939522 4.3187609796642693e-10 9.364640831165595 -0.20287602494805368 ELGPLPDDDDMAS(ph)PKLK ddPTM_A549_PD325901_60min_R1 3 ELGPLPDDDDMASPKLK 17 1 Q86U86-8;Q86U86;E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;H0Y5B5;Q86U86-6 Q86U86-8 PBRM1 Protein polybromo-1 1 ELGPLPDDDDMAS(1)PKLK;ELGPLPDDDDMAS(1)PKLK;ELGPLPDDDDMAS(1)PKLK 126.69 1.7508e-11 20526500.0 9061.599999999999 9225.2 9980.8 9674.5 11755.4 13228.599999999999 10875.3 10971.099999999999 10908.3 10690.0 11548.2 True False 9981.526961202657 10002.63997984222 10658.157107426061 10272.071892616344 10929.741257928412 13120.870667528356 11289.165492692502 10752.272803838552 10449.862085635072 10015.03157563319 10127.8446100713 0.9855529330768816 0.9876375838048923 1.0523618319368178 1.0142406689772492 1.0791774240947272 1.2955244844970013 1.1146661434226948 1.0616545985654549 1.0317952622657294 0.988861101371369 1.0 13.306039554554792 -3.8366992212689315 14.370850023586733 1.0433830650881661 0.38780988393993765 0.0 0.08667727504738318 0.0 0.0 0.011995402206599245 0.0 0.00014564674350094477 3.8366992212689315 -0.6555731811482285 ELGS(ph)PTDEDSGQDQQLLR ddPTM_A549_MK2206_60min_R1 2 ELGSPTDEDSGQDQQLLR 18 0 H0Y713;Q86YN6-6;Q86YN6-5;Q86YN6-4;Q86YN6-2;Q86YN6-3;Q86YN6 H0Y713 PPARGC1B Peroxisome proliferator-activated receptor gamma coactivator 1-beta 1 ELGS(0.92)PT(0.08)DEDSGQDQQLLR;ELGS(0.925)PT(0.075)DEDSGQDQQLLR 85.16 7.696399999999999e-05 3675300.0 1314.55 1227.78 1380.8200000000002 1038.14 1624.89 1251.51 951.66 1103.64 1859.31 1352.23 1812.83 True False 1536.413902338164 1290.2687577276142 1576.6410392347298 1292.4843466038762 1385.870833478768 1383.9439575148976 1124.5643035134322 1260.0843497557482 1438.1792537079546 1046.7603038354785 1362.6542794372779 1.127515559539168 0.9468790266159396 1.157036720925149 0.9485049627830919 1.0170377434627642 1.0156236826896485 0.8252748481278998 0.9247278409283043 1.0554248978705483 0.7681774604397448 1.0 10.41220386543493 -5.241339537303777 23.044896823116403 1.0061110712880437 1.1275158987029557 0.05567612609428907 0.10796544431749062 2249.6219288486077 2579120.696008359 0.010960295898256365 0.5203156244235533 5.736677856005463e-06 5.241339537303777 0.12140482741491199 ELGS(ph)PTDEDSGQDQQLLR ddPTM_A549_PD325901_60min_R1 2 ELGSPTDEDSGQDQQLLR 18 0 H0Y713;Q86YN6-6;Q86YN6-5;Q86YN6-4;Q86YN6-2;Q86YN6-3;Q86YN6 H0Y713 PPARGC1B Peroxisome proliferator-activated receptor gamma coactivator 1-beta 1 ELGS(0.808)PT(0.175)DEDS(0.018)GQDQQLLR;ELGS(0.887)PT(0.113)DEDSGQDQQLLR 88.73 6.8395e-06 5023800.0 928.93 801.49 887.04 1077.29 772.63 1083.6799999999998 833.31 918.69 596.81 603.36 798.76 True False 1023.2342897578769 869.0343751293991 947.2398686048423 1143.8317565968953 718.3631342287997 1074.8548693729583 865.0220680547292 900.3660072516375 571.7281511626809 565.263746629938 700.5175837568241 1.4606832340600886 1.2405604017372867 1.3521999883641247 1.6328380373589053 1.0254748073221391 1.5343724330352864 1.234832769529752 1.2852868052548245 0.8161510352053477 0.8069229948497085 1.0 9.452277454107314 -8.68386328233455 5.486615313001065 0.9134688112587331 1.3477878330907298 0.6269977766292776 0.16152935869365148 0.09593822579752719 5.0061258982405334 0.026004968469253927 0.02937702909811134 2.0707931402770563e-09 8.68386328233455 0.43431902183199667 ELHFEGEEVDYDVS(ph)PSDPK ddPTM_A549_MK2206_60min_R1 2 ELHFEGEEVDYDVSPSDPK 19 0 Q13393-4;Q13393-2;Q13393;Q13393-3;F8WBV7;C9IY79 Q13393-4 PLD1 Phospholipase D1 1 ELHFEGEEVDY(0.052)DVS(0.912)PS(0.036)DPK;ELHFEGEEVDY(0.006)DVS(0.836)PS(0.158)DPK 113.26 2.4409e-11 5685900.0 1978.9 1939.17 2025.2200000000003 2316.49 3044.7 2324.2 2611.3 2918.6 3533.5 3197.0 2992.6 True False 2312.8899405401035 2037.8654701352482 2312.426649004911 2884.0301539911884 2596.8286632896998 2570.1453013209025 3085.739408785309 3332.320487837635 2733.167891840016 2474.7954795870705 2249.4548284417187 1.0282002160240438 0.9059374939958024 1.0279942587719422 1.282101830864087 1.1544257881758042 1.142563642009801 1.3717721155231715 1.4813902665234038 1.2150356865504979 1.10017567292136 1.0 11.135359680946706 -6.051000368213838 7.031331979319723 1.1662264086437166 0.9666573963275781 0.3295604963477624 0.13402222269890368 0.275495492557141 32.39388866357724 0.022772585139999645 0.061684171680414346 8.892003639547067e-07 6.051000368213838 -0.19956901231613855 ELHFEGEEVDYDVS(ph)PSDPK ddPTM_A549_PD325901_60min_R1 2 ELHFEGEEVDYDVSPSDPK 19 0 Q13393-4;Q13393-2;Q13393;Q13393-3;F8WBV7;C9IY79 Q13393-4 PLD1 Phospholipase D1 1 ELHFEGEEVDYDVS(0.996)PS(0.004)DPK;ELHFEGEEVDYDVS(0.998)PS(0.002)DPK 136.14 2.2651999999999996e-17 14237100.0 4437.5 3984.4 3265.2 3829.2 5043.5 3390.8999999999996 3860.0 4075.2 4388.8 4535.0 4641.4 True False 4887.991733285155 4320.179371253017 3486.796107242664 4065.720987255827 4689.26195913044 3363.28563464931 4006.894412273049 3993.916939067447 4204.353998463116 4248.659326052057 4070.5372242587564 1.2008222659541594 1.0613290416573258 0.8565935932148634 0.9988168055621193 1.1520007558668999 0.8262510448511531 0.9843650092163703 0.9811768616843292 1.032874474997272 1.043758868173902 1.0 11.991003496752283 -5.356709770033621 3.862166293175137 0.9979882299718946 1.204074222660588 0.35036845337368516 0.08411836447197821 0.18324334373719814 4.402075124831746 0.010695759227290953 0.08488817529745708 4.398354501252418e-06 5.356709770033621 0.20608599268869343 ELHINLIPNK ddPTM_A549_MK2206_60min_R1 2 ELHINLIPNK 10 0 G3V2J8;P07900;P07900-2;Q14568 G3V2J8;P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ; 74.16199999999999 0.0017570999999999997 4115900.0 1538.71 1367.0500000000002 965.3 1127.29 1812.7 1517.47 1507.87 1568.3600000000001 2760.0 3146.7 2473.18 False True 1798.4066301523374 1436.6270058573482 1102.194055107316 1403.4761006059716 1546.0542312691705 1678.0476681849377 1781.8304608145756 1790.6798329010603 2134.8644068143326 2435.858284521937 1859.0211497044343 0.9673943894819411 0.7727868002393397 0.5928894651266091 0.7549543483295552 0.8316496192176068 0.9026511981597038 0.9584777779950857 0.9632380100601655 1.1483809138770447 1.310290786583689 1.0 10.86032746826006 -7.702865547977764 1.1465860971001278 1.0661451056423574 0.764009735457595 0.601955905327312 0.11724433337455581 0.21737038601269726 0.5774999206281309 0.017609444334434992 0.03001355100624849 1.9821405762213655e-08 7.702865547977764 -0.30213537018476244 ELHINLIPNK ddPTM_A549_PD325901_60min_R1 2 ELHINLIPNK 10 0 G3V2J8;P07900;P07900-2;Q14568 G3V2J8;P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ; 68.893 0.0041608999999999995 8291500.0 1717.5 1961.0 1765.73 1667.4099999999999 2457.3 2343.3999999999996 2170.35 2200.4 3170.3999999999996 3130.6 2961.0 False True 1891.8593356433266 2126.2603521301 1885.5630559970552 1770.4021287371356 2284.707725224789 2324.316127351793 2252.9438569110903 2156.5112958195928 3037.1591133629836 2932.933381728461 2596.8157713254986 0.7285304396767663 0.8187952243700322 0.7261058242243357 0.6817588480038633 0.8798112482421502 0.895063929069326 0.867579395422847 0.8304444695816214 1.1695704974145007 1.129434522893165 1.0 11.342527951653828 -8.700460381878608 7.224935799196954 1.0799195122695182 0.804073018601056 0.7531838032601553 0.07531100292899383 0.096529783083813 9.488862900729195 0.015307313919563914 0.017319044866858625 1.993148321024883e-09 8.700460381878608 -0.27584649366846226 ELHINLIPNKQDR ddPTM_A549_MK2206_60min_R1 2 ELHINLIPNKQDR 13 1 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 78.486 0.0029773000000000004 18978200.0 2916.8 3495.8 4594.5 3980.8 6711.4 5350.799999999999 5139.4 4513.9 8396.8 6449.700000000001 5922.2 False True 3409.0845310866516 3673.7212882309473 5246.069186978728 4956.096178704901 5724.161950537821 5917.018104426421 6073.16245452886 5153.759148238983 6494.938206934273 4992.708290488811 4451.554295594979 0.7658189263152648 0.825267096453539 1.178480332626732 1.113340610853425 1.285879396372217 1.3292027259516046 1.3642790924820434 1.157743746569343 1.4590270668744438 1.1215651790273184 1.0 12.120093437152342 -5.752698463932098 2.02580199839983 1.2355913627837052 0.7406983406322436 0.6384720800136885 0.12433110243574794 0.22970377362005542 1.7248212391163333 0.024039554603442388 0.14581252319717045 1.7672644285162538e-06 5.752698463932098 -0.4948930221514616 ELHINLIPNKQDR ddPTM_A549_PD325901_60min_R1 2 ELHINLIPNKQDR 13 1 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 96.734 0.00059005 46531000.0 6532.9 6434.9 7188.7 7078.0 9145.1 10078.1 7022.799999999999 7819.2 10532.1 7276.4 7420.299999999999 False True 7196.115198733204 6977.191606283518 7676.568411164811 7515.191984695694 8502.779724882279 9996.027294983402 7290.056497023616 7663.2399219562685 10089.472463364342 6816.966862201804 6507.650141157242 1.1057931884232384 1.0721522292903685 1.1796221746179647 1.1548242179102892 1.3065821825772348 1.5360425158328854 1.1202287060452272 1.1775740483482 1.5504017955043528 1.0475312462002693 1.0 12.66792097679347 -6.634925473951476 4.410671010276316 1.2721928080383873 1.121936481886065 0.09718316588872011 0.16817994623672536 0.42812323174372185 14.547581531283178 0.030630113583578204 0.06549419524075474 2.3177923549649647e-07 6.634925473951476 -0.1502563261523222 ELHPQLLS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 ELHPQLLSPTK 11 0 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 ELHPQLLS(0.998)PT(0.002)K;ELHPQLLS(0.84)PT(0.16)K 83.729 0.00017878 54429000.0 2682.5299999999997 2865.36 3017.27 2758.85 4287.6 3084.54 3306.1200000000003 3419.5 4343.8 4356.5 4511.6 True False 3135.2754824382464 3011.1945850579054 3445.1642563489636 3434.768373849483 3656.899719749375 3410.9439754480595 3906.7992088895517 3904.224596779552 3359.936235623223 3372.3636242793473 3391.245206174447 0.9245204318254086 0.8879318368295567 1.015899484377109 1.0128339783852236 1.0783353893405438 1.0058087127518078 1.152024985328821 1.1512657915951114 0.9907677066541164 0.9944322569595611 1.0 11.727599387793411 -5.787346853262714 8.389483646196554 1.0247863836332904 0.9061875018342997 0.4162213603159348 0.0595396416399159 0.1648504912714584 46.616359241848706 0.009198730718625335 0.02956157684727867 1.6317482166978855e-06 5.787346853262714 -0.1185988817989907 ELHPQLLS(ph)PTK ddPTM_A549_PD325901_60min_R1 4 ELHPQLLSPTK 11 0 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 ELHPQLLS(0.984)PT(0.016)K;ELHPQLLS(0.994)PT(0.006)K;ELHPQLLS(0.84)PT(0.16)K;ELHPQLLS(0.985)PT(0.015)K 108.66 3.5721e-05 90135600.0 6507.000000000001 6567.42 6799.8 6301.799999999999 8038.01 7241.39 7129.200000000001 7257.57 7465.400000000001 7786.599999999999 7950.4 True False 7167.585849799783 7120.8795317624945 7261.275318519125 6691.047873573788 7473.447907229118 7182.418520715205 7400.505607247929 7112.812072896478 7151.655199627815 7294.952747130526 6972.551201738014 1.0279717771040755 1.0212731790320173 1.041408676455347 0.959626925637483 1.0718383689124071 1.0300990717608325 1.061377018702027 1.0201161478919654 1.0256870107809544 1.046238677359895 1.0 12.767470908139023 -4.843272282727421 16.461258244993385 1.0198983978215006 4.0970948427402405 0.0 0.02976091827555776 847.2329153091916 89039.926810091 0.0037550171613406035 59.68658062821497 1.4345897293632717e-05 4.843272282727421 3.07719644491874 ELHS(ph)AEEGAEEEEEK ddPTM_A549_MK2206_60min_R1 2 ELHSAEEGAEEEEEK 15 0 E7EVB6;E9PEY4;O60941 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 1 ELHS(1)AEEGAEEEEEK;ELHS(1)AEEGAEEEEEK 159.81 3.9283e-20 6566300.0 639.77 1212.6399999999999 900.68 1091.71 1133.6599999999999 1359.83 1089.83 1544.76 1590.6799999999998 1409.2199999999998 1513.98 True False 747.7475351252425 1274.3581963957824 1028.4099674236593 1359.1789990087248 966.9001157503207 1503.7263080179 1287.8380040119835 1763.7344606290922 1230.3935197939936 1090.8762232542033 1138.016982277682 0.6570618424592088 1.1198059574165762 0.9036859585041956 1.1943398210880811 0.8496359288199022 1.3213566505908108 1.1316509543068878 1.5498314068205459 1.0811732504478313 0.9585764010927772 1.0 10.152306371361933 -6.242941428436834 23.718198036078086 1.097393530620683 0.9161466696175777 0.19806481031983048 0.20551302228084806 672.9875568673042 862905.1080872518 0.02782002961171699 0.07342044316511977 5.715557149118785e-07 6.242941428436834 -0.18124686100310528 ELHS(ph)AEEGAEEEEEK ddPTM_A549_PD325901_60min_R1 2 ELHSAEEGAEEEEEK 15 0 E7EVB6;E9PEY4;O60941 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 1 ELHS(1)AEEGAEEEEEK;ELHS(1)AEEGAEEEEEK 188.58 4.8347e-34 8016200.0 2085.3 1879.13 1865.3400000000001 1932.21 2055.8 1842.42 1829.3899999999999 1879.23 2081.8999999999996 2090.55 2457.3999999999996 True False 2296.998120883276 2037.4908799073085 1991.9331896006463 2051.558223332702 1911.407700124985 1827.415942372405 1899.0084375306192 1841.7472834225855 1994.4049830022707 1958.5523162245045 2155.1553787420735 1.0658155525769997 0.9454032409934899 0.9242643056034795 0.9519305399363643 0.8869001831508967 0.8479276995049126 0.8811468798314844 0.8545774943139279 0.9254112268074007 0.9087754579290136 1.0 11.073576170709524 -4.068766100488528 15.713322253062023 0.9415213252210638 0.9282440079564545 0.0 0.06293532215717655 0.0 0.0 0.009014426493551548 0.0 8.535596949039934e-05 4.068766100488528 -0.013277317264609345 ELIIGDR ddPTM_A549_MK2206_60min_R1 2 ELIIGDR 7 0 P25705-2;P25705;P25705-3;K7EK77;K7ENJ4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ; 77.282 0.047912 6439100.0 3088.3999999999996 3065.2 2906.3999999999996 2373.5699999999997 4016.1 3119.8 3354.6 2735.7 4397.2 4300.1 4486.3 False True 3609.64641586945 3221.2055874722496 3318.5712232092646 2955.0947565536044 3425.3370100955012 3449.935165244367 3964.0873973542652 3123.4938527298764 3401.241220885501 3328.7044234508494 3372.227894418924 1.0704040559783805 0.9552158656902703 0.9840886580356976 0.8763033961744757 1.0157489699211828 1.0230433034950128 1.175509936299049 0.9262404411929854 1.0086036078743654 0.987093555853652 1.0 11.71948632124999 ELIIGDR ddPTM_A549_PD325901_60min_R1 3 ELIIGDR 7 0 P25705-2;P25705;P25705-3;K7EK77;K7ENJ4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ;; 87.323 0.024552 7781000.0 4086.2 3533.4 3640.9 3880.1 4983.299999999999 4110.3 3799.7 4066.0 4181.1 4314.4 4397.6 False True 4501.028015898549 3831.17201846838 3887.9933685102915 4119.764964653541 4633.290199451712 4076.8270795656226 3944.2996627756233 3984.900440284704 4005.3829071669097 4041.988047699887 3856.7230786832233 1.1670602021639849 0.9933749300394242 1.0081079945822153 1.0682034671932232 1.2013541301579858 1.0570702112627564 1.0227075116117232 1.0332347848125107 1.0385456319914061 1.0480368865580874 1.0 11.913159845626675 -8.621796589131394 0.7032574513648258 1.0108543041276703 1.075946650003731 0.12088676355796202 0.059913580273939185 0.8468120066861402 0.8727514723926342 0.01596791202381278 0.01758562871503726 2.3889299260241777e-09 8.621796589131394 0.06509234587606061 ELILGSETPSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ELILGSETPSSPR 13 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 ELILGSETPSS(1)PR;ELILGSETPS(0.003)S(0.997)PR 243.2 8.484599999999999e-57 51860000.0 10620.1 11184.9 11240.6 11921.9 13311.8 11890.7 11473.2 11984.0 12312.5 13504.7 12920.099999999999 True False 11698.244733895599 12127.49077640997 12003.454711218883 12658.288686400616 12376.82509121692 11793.866081549028 11909.818904375941 11744.969718733864 11795.048442872107 12652.010937273482 11331.009607261936 1.0324097445295877 1.070292162548126 1.0593455594218173 1.1171368770429813 1.0922967608539251 1.0408486525322909 1.051081882124877 1.0365333827981775 1.0409529999262177 1.116582844406462 1.0 13.467988792384634 -9.25575083619675 0.4289901867460353 1.0002519593127224 1.073210527623022 0.0 0.040348529834798884 0.5572213538485955 0.2513443793695554 0.015244713673745785 0.009318098662531128 5.549440045949604e-10 9.25575083619675 0.07295856831029957 ELIPQES(ph)PR ddPTM_A549_MK2206_60min_R1 2 ELIPQESPR 9 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 ELIPQES(1)PR;ELIPQES(1)PR 112.83 0.00026259 46628000.0 2260.2 2895.1000000000004 2479.2 2108.9 3632.0 2821.3 2291.74 2877.3 3588.3 4085.5 3774.1000000000004 True False 2641.666503415403 3042.448224028096 2830.7878394510076 2625.580594672118 3097.737611281305 3119.8480933726287 2708.1194932369467 3285.166086361692 2775.555779337633 3162.58271249702 2836.886810138972 0.9311850208383866 1.072460209957779 0.9978501184234186 0.9255147527523304 1.0919496682807568 1.0997435929492707 0.9546096388330286 1.15801803393092 0.9783808678646806 1.1148075070157957 1.0 11.470092873868335 -3.939179109387422 12.286345186226058 1.008897597782102 0.569832644402855 0.0 0.07961056980325736 0.0 0.0 0.00894116930889297 0.0 0.00011503258799099815 3.939179109387422 -0.439064953379247 ELIPQES(ph)PR ddPTM_A549_PD325901_60min_R1 2 ELIPQESPR 9 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 ELIPQES(1)PR;ELIPQES(1)PR 100.93 0.00075459 57351000.0 5351.1 5497.4 5720.8 5008.1 6105.7 5328.6 4435.1 5696.4 5839.5 5614.9 6569.7 True False 5894.339732728386 5960.685191126977 6109.0478899650325 5317.438962779666 5676.856695521504 5285.205648291702 4603.880157479846 5582.780833260648 5594.086122408257 5260.374255755169 5761.66854875959 1.0230265213706815 1.0345414944791007 1.0602914482611516 0.9228991424583839 0.9852799839976313 0.9173047015051806 0.7990532809234575 0.9689520988607626 0.9709142542766694 0.9129949443009278 1.0 12.492270953696007 -6.25268769164388 24.871455208960462 0.9629913259959548 1.0388119914146208 0.32807177016460964 0.05701952584221781 696.6646343587882 1979849.052456004 0.008529413358841909 0.022188287303286827 5.588719443401319e-07 6.25268769164388 0.07582066541866594 ELISNASDALDKIR ddPTM_A549_MK2206_60min_R1 2 ELISNASDALDKIR 14 1 P08238;P14625;Q96GW1;A0A1W2PRR1;F8W026 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin 0 ; 170.49 1.5336000000000002e-22 22528000.0 3008.7 2961.9 3161.5 3345.6 4044.2 3277.2 2436.97 2857.5 5089.5 4708.0 4432.6 False True 3516.4950043473686 3112.6480587022274 3609.848239119217 4165.272150189692 3449.3035373193443 3623.9911287707014 2879.7359043493784 3262.5593757267347 3936.736376261431 3644.4595301519953 3331.863086463529 1.0554140170506856 0.9342064718529661 1.0834323456402117 1.2501330463163633 1.0352476820950252 1.0876770847799873 0.8643019924945228 0.9791997123116023 1.1815420604331976 1.0938203148137937 1.0 11.702113403091118 -8.72531335506134 24.999387840259438 1.085728416260903 1.037461233903483 0.05635384607550342 0.10037506718508683 533.5697874842837 369232.8777810509 0.0193755627463331 0.021969474752336127 1.882290476588061e-09 8.72531335506134 -0.04826718235742011 ELISNASDALDKIR ddPTM_A549_PD325901_60min_R1 2 ELISNASDALDKIR 14 1 P08238;P14625;Q96GW1;A0A1W2PRR1;F8W026 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin 0 ; 235.71 2.8544000000000004e-57 53293000.0 7136.0 6822.5 7587.6 7200.8 8548.3 8545.8 8498.5 8426.0 8450.5 7818.0 8356.2 False True 7860.441466754452 7397.456018565832 8102.540163945371 7645.577061796652 7947.896898034049 8476.205838150958 8821.915068057637 8257.936819930868 8095.35487240534 7324.3701457717725 7328.440374316153 1.0725940398318303 1.0094175077812677 1.1056295405421037 1.0432747858046252 1.0845277428863163 1.1566179712476554 1.2037916142397278 1.126834141800799 1.1046490738707486 0.9994445982587721 1.0 12.839290483887465 -4.412954318392874 16.333735645993578 1.0738505686222957 1.0797015539517478 0.0 0.063741710286537 0.0 0.0 0.009319939915358745 0.0 3.864076195063171e-05 4.412954318392874 0.005850985329452163 ELISNSSDALDK ddPTM_A549_MK2206_60min_R1 1 ELISNSSDALDK 12 0 G3V2J8;P07900;P07900-2;Q14568 G3V2J8;P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 107.53 0.00035742 2213500.0 2642.3 2907.5 2439.1 2231.4 3152.6 2852.9 2302.9 2444.8 3365.2 3285.8 3621.6 False True 3088.255641967314 3055.4793310634145 2785.0010564718295 2778.093100171351 2688.856716223968 3154.791984398247 2721.3071207795692 2791.35788688599 2602.9875731201428 2543.53549791279 2722.256768924856 1.1344468593926973 1.1224067347145081 1.0230486294545074 1.020511045057865 0.9877307485898624 1.158888470922682 0.999651154087988 1.0253837620131716 0.9561873820404466 0.9343481213630517 1.0 11.410587435921222 -7.974546214347507 24.974743381018385 0.9836323479349999 1.0688889515256332 0.42049917331255193 0.053498987681333224 180.36650782753563 176971.5769232621 0.00824902413119989 0.011397465889535769 1.0603610967276553e-08 7.974546214347507 0.08525660359063336 ELISNSSDALDKIR ddPTM_A549_MK2206_60min_R1 2 ELISNSSDALDKIR 14 1 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 110.77 1.0583e-05 14670200.0 1601.06 2074.45 1955.38 1778.65 2232.8 1795.18 2180.3 1949.9299999999998 2663.5 2918.9 2897.6 False True 1871.2797858411925 2180.0306443076497 2232.6822868286995 2214.419329846634 1904.3580777722752 1985.144756055959 2576.432287739672 2226.3385489101756 2060.2215027354973 2259.5184627359095 2178.0459503083353 0.8591553293796601 1.0009112268724327 1.025085024727155 1.0167000055867277 0.87434247082927 0.9114338270847463 1.1829099782651231 1.022172442502879 0.9459035987940667 1.0374062413219705 1.0 11.088818675623552 ELISNSSDALDKIR ddPTM_A549_PD325901_60min_R1 2 ELISNSSDALDKIR 14 1 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 193.47 4.121100000000001e-27 45723000.0 4241.4 3397.5 4326.1 4421.8 4776.1 5105.200000000001 5403.9 5028.3 4631.0 5322.9 4818.0 False True 4671.983805646349 3683.8192485272884 4619.695160952617 4694.92454336358 4440.643212650519 5063.624943823666 5609.548371627541 4928.006611874958 4436.375174736306 4986.811185588202 4225.41654381839 1.1056859737251865 0.8718239279667147 1.0933111831805176 1.1111151988629524 1.0509362015792256 1.1983729630707156 1.3275728708531893 1.1662771139296144 1.0499261146753778 1.1801939841608518 1.0 12.044877854714745 -4.335598799240489 16.3641758159225 1.0660834678477351 1.0685745863655374 0.0 0.11903744717359913 0.0 0.0 0.01616256069822745 0.0 4.617439361286912e-05 4.335598799240489 0.00249111851780226 ELKAEDEDIVLT(ph)PDGTR ddPTM_A549_MK2206_60min_R1 2 ELKAEDEDIVLTPDGTR 17 1 F5GZI3;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ELKAEDEDIVLT(1)PDGTR;ELKAEDEDIVLT(0.999)PDGT(0.001)R 119.06 4.2429e-10 10467400.0 2056.8 2466.49 1857.49 1732.12 2827.0 2263.0 2180.99 2279.1 3020.4 2351.1 2736.8 True False 2403.9375560679605 2592.023805769422 2120.9100128678024 2156.4894777578206 2411.152044904255 2502.4691579421756 2577.2476518081685 2602.169404451022 2336.284222587683 1819.9848770901356 2057.177028162566 1.168561345551829 1.259990642654887 1.0309807973901797 1.0482760833101266 1.1720683304819193 1.216457856413717 1.2528079093465867 1.2649224489810842 1.1356748547179776 0.8847001751306323 1.0 11.006450233441283 -10.038604917254533 0.9351631627447171 1.0142024321997491 1.1718878925902823 0.48451220516695415 0.08509002703947657 0.3948476684893131 0.6960200740591661 0.032345867716537455 0.015945264931966515 9.149451992899678e-11 10.038604917254533 0.1576854603905331 ELKELIQK ddPTM_A549_PD325901_60min_R1 1 ELKELIQK 8 1 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 85.676 0.024668 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ELKEQAQQAGLDDEVPHGQESDLFS(ph)ETSSVVSGSEMSGK ddPTM_A549_PD325901_60min_R1 1 ELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGK 39 1 O95163;F5H2T0;H0YDF3 O95163 IKBKAP Elongator complex protein 1 1 ELKEQAQQAGLDDEVPHGQES(0.005)DLFS(0.482)ET(0.404)S(0.086)S(0.022)VVS(0.001)GSEMSGK 96.23899999999999 5.3469e-10 6543600.0 906.23 771.21 617.66 689.48 961.6 1149.6 866.57 981.04 1091.3 1021.3 1291.0 True False 998.2298024687336 836.2025732617304 659.5781218913093 732.0676136773079 894.0605333399085 1140.2380387486653 899.5477955552991 961.4723875890081 1045.4364560979773 956.8149437038519 1132.215184323276 0.881660850596501 0.7385544592934673 0.5825554461942131 0.6465799291632571 0.7896560174418502 1.007085980241631 0.7945025009472542 0.8491958073885746 0.9233549157202249 0.8450822396236802 1.0 10.144932461783466 -7.9122050582555445 0.5018886900794352 0.9825814345974861 0.7053465228098871 0.3080805150890841 0.1057817245471627 0.5533514327414716 0.2971708112584197 0.030224717217066953 0.05661213438118601 1.2240381159668404e-08 7.9122050582555445 -0.27723491178759907 ELKEQAQQAGLDDEVPHGQESDLFSETS(ph)SVVSGSEMSGK ddPTM_A549_PD325901_60min_R1 1 ELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGK 39 1 O95163;F5H2T0;H0YDF3 O95163 IKBKAP Elongator complex protein 1 1 ELKEQAQQAGLDDEVPHGQES(0.001)DLFS(0.039)ET(0.039)S(0.453)S(0.453)VVS(0.011)GS(0.003)EMSGK 108.5 8.7506e-15 5162300.0 603.15 810.08 731.74 784.37 1119.3 1028.2 952.81 1002.1 1013.3 1138.1 1026.6 True False 664.381343984438 878.3482845760076 781.400276710078 832.8187534664816 1040.6842293753748 1019.8266800986231 989.0697059476375 982.1123293677582 970.7145248456699 1066.240171770639 900.3347081535828 0.7379270597564312 0.9755797223205298 0.8678997595378534 0.9250101611371133 1.1558859388078269 1.1327194996070915 1.0985577885540296 1.0908302439899111 1.078170724792364 1.1842708740589343 1.0 9.814317626799482 -6.592736474844335 6.2500205146838885 1.0606592670054646 0.8757118335965159 0.651989906904265 0.07686686507761395 0.10840728074201338 7.44000879692534 0.01025965229656142 0.02157305432006463 2.554250724013105e-07 6.592736474844335 -0.1849474334089487 ELKEQYS(ph)DAPEEIR ddPTM_A549_MK2206_60min_R1 2 ELKEQYSDAPEEIR 14 1 Q8NEJ9-2;Q8NEJ9;H0YJ17 Q8NEJ9-2 NGDN Neuroguidin 1 ELKEQYS(1)DAPEEIR;ELKEQYS(1)DAPEEIR 152.04 2.7866000000000003e-14 24359000.0 7021.5 7595.200000000001 5981.0 6915.200000000001 9054.8 7603.299999999999 6848.4 7422.3 10135.1 9802.5 9594.1 True False 8206.557540806672 7981.763238277843 6829.195735622977 8609.424310435123 7722.85091482103 8407.876159337937 8092.665632874542 8474.433754840427 7839.516032428967 7588.108441868084 7211.620186310455 1.137963083023267 1.1067919596527451 0.9469710771216959 1.193826642004534 1.0708898576606993 1.165878948436343 1.1221702507623104 1.175108163755923 1.0870672373054842 1.052205779815235 1.0 12.816107701155627 -10.035300722029671 0.9064784082877889 1.0085730777128585 1.1110905807905063 0.19684500677418604 0.06469658839479638 0.47251804569586786 0.7828074209329393 0.025005217960557866 0.012101431530694326 9.219328247049204e-11 10.035300722029671 0.10251750307764773 ELKEQYS(ph)DAPEEIRDAR ddPTM_A549_MK2206_60min_R1 1 ELKEQYSDAPEEIRDAR 17 2 Q8NEJ9-2;Q8NEJ9;H0YJ17 Q8NEJ9-2 NGDN Neuroguidin 1 ELKEQY(0.013)S(0.987)DAPEEIRDAR 40.937 0.019675 4701100.0 1304.3 1942.0 1235.9 1916.6 2208.4 1479.8 1555.6 1444.1 2700.5 2128.4 2496.4 True False 1524.4339529266044 2040.839505047341 1411.1692040890218 2386.167086039442 1883.54728544979 1636.3914537882588 1838.2323839874493 1648.8055973707699 2088.8410618123567 1647.592961762002 1876.4749828650338 0.8123923669896589 1.087592173454587 0.7520319838927054 1.2716221147783178 1.0037689298548271 0.8720560991917881 0.9796199793619443 0.8786717715007026 1.1131728804735135 0.878025540871549 1.0 10.873809341027588 -8.772034819608283 24.99807725914916 1.0534427432003595 0.9646652460534549 0.0 0.14543120764147194 397.70806674818925 938319.6827388364 0.02238839807153041 0.02395520234687109 1.690305405786943e-09 8.772034819608283 -0.08877749714690453 ELKEVFGDDSEISKES(ph)SGVK ddPTM_A549_PD325901_60min_R1 1 ELKEVFGDDSEISKESSGVK 20 2 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 ELKEVFGDDS(0.012)EIS(0.076)KES(0.503)S(0.409)GVK 94.446 4.7176000000000004e-07 4262800.0 1803.4 1638.7 1934.0 1673.6 2140.6 1996.4 1658.2 1806.9 2103.0 2017.0 1820.0 True False 1986.4798404070873 1776.7990000181499 2065.252870086767 1776.9744709786241 1990.251640669103 1980.1419803043093 1721.303708401857 1770.8599620143723 2014.6182233794968 1889.6462757766276 1596.1515379305665 1.244543386514909 1.1131768869024776 1.2938952355140396 1.1132868206752455 1.246906445518007 1.2405726732385272 1.0784087021170634 1.1094560384349959 1.2621722784488736 1.1838764872078382 1.0 10.640381911562333 -10.93732019912509 1.1018847068490165 0.9960247518450678 1.1920950305527647 0.0151012316346254 0.08869708563738901 0.35028569327802306 0.7298444497382784 0.05455671408441309 0.011759833376697448 1.1552601712795464e-11 10.93732019912509 0.1960702787076969 ELKPEQETT(ph)PR ddPTM_A549_PD325901_60min_R1 1 ELKPEQETTPR 11 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 ELKPEQET(0.154)T(0.846)PR 60.401 0.0033009999999999997 14670000.0 3565.2 3961.6 4142.1 4141.9 5027.6 3753.7 3843.1 3857.4 4446.0 4921.1 4231.6 True False 3927.1364794384754 4295.457935236408 4423.207814470731 4397.735756062599 4674.478720278419 3723.1311117352684 3989.3512735250106 3780.4611309282427 4259.1500813814755 4610.380906159821 3711.140026322522 1.058202183583461 1.1574497067664957 1.191873058709083 1.185009383874002 1.2595802602766508 1.0032311056246048 1.0749665184361628 1.0186791940250266 1.1476662295607296 1.2423085287699003 1.0 11.857646721555756 -7.270536841194926 24.993447026507763 1.0633805902999782 1.1717042197217875 0.22013971313732184 0.07993105294733745 550.4601837160956 1512276.412041052 0.010468401729650136 0.016883787275698624 5.3636836938895715e-08 7.270536841194926 0.10832362942180929 ELKPQKS(ph)VVSDLEADDVK ddPTM_A549_MK2206_60min_R1 2 ELKPQKSVVSDLEADDVK 18 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 ELKPQKS(0.824)VVS(0.176)DLEADDVK;ELKPQKS(0.873)VVS(0.127)DLEADDVK 117.43 9.266399999999999e-11 6208700.0 2567.9 2914.3 2916.3 3245.6 3834.8 3216.8999999999996 2430.0 2948.1000000000004 4427.0 4210.0 4273.0 True False 3001.298740872671 3062.625422018263 3329.8751920744503 4040.772145700519 3270.705999928844 3557.3102227946 2871.499545570521 3366.002203177598 3424.2915684663203 3258.958076028016 3211.896171199446 0.9344320553649372 0.953525661719806 1.0367318912525576 1.2580643739151565 1.018310003061972 1.107542097622092 0.894020040659718 1.0479797676400613 1.066127728278202 1.0146523742736662 1.0 11.649209541241857 -11.082845601406554 1.4154677652017764 1.0000601603758115 1.0408998891844554 0.009732490606401467 0.09220771977034439 1.7209120330038188 6.172893988614978 0.06594451127764561 0.01458091311221244 8.263316714102637e-12 11.082845601406554 0.04083972880864395 ELKPQKS(ph)VVSDLEADDVK ddPTM_A549_PD325901_60min_R1 2 ELKPQKSVVSDLEADDVK 18 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 ELKPQKS(1)VVSDLEADDVK;ELKPQKS(1)VVSDLEADDVK 164.66 7.3567e-24 15674000.0 3753.2000000000003 3624.8 4184.5 3418.0 5142.2 4502.4 4189.5 4803.4 4176.1 4218.7 4487.5 True False 4134.222101040194 3930.274617236704 4468.485333442646 3629.1220971587854 4781.029611626955 4465.733947165962 4348.933715082368 4707.592418805594 4000.593039778942 3952.330562032155 3935.565948606276 1.0504771499266246 0.9986555094137235 1.1354111179422863 0.9221347436558615 1.2148264503914836 1.1347120097803054 1.1050338812445717 1.1961665692510426 1.0165229326663157 1.0042597719476194 1.0 11.942355400074051 -8.96309109191411 24.968485246699366 1.0072894430387196 1.093616142909059 0.1962373575956674 0.07927011551571611 187.36988721667524 126754.46417468504 0.013337074252062982 0.014160173091297194 1.0887017175913696e-09 8.96309109191411 0.08632669987033936 ELKTDS(ph)SPNQAR ddPTM_A549_MK2206_60min_R1 2 ELKTDSSPNQAR 12 1 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 ELKT(0.014)DS(0.667)S(0.32)PNQAR;ELKTDS(0.638)S(0.362)PNQAR 126.1 1.9726e-06 231069000.0 6922.0 7668.2 7756.8 6762.5 7649.0 4826.6 5485.37 5239.9 8076.4 9394.1 9889.4 True False 8090.264373348119 8058.478626469638 8856.830878127454 8419.312803580156 6523.8422325690335 5337.34760836222 6481.990725220641 5982.67187152074 6247.108295360609 7271.9662855142 7433.58904644507 1.08833893329321 1.084062970944487 1.1914609245668502 1.1326040154999535 0.8776167463398988 0.7180041262725808 0.8719866923932919 0.8048160631615497 0.8403892462078104 0.9782577756288313 1.0 12.859843218080531 -6.76040627783324 24.99253060994671 0.8911362267170325 1.1260660679871717 0.704699715462654 0.07833433954299317 14.926129798179666 361071.34212828346 0.013558436380379329 0.027006395812109427 1.736175894871697e-07 6.76040627783324 0.23492984127013916 ELKTDSS(ph)PNQAR ddPTM_A549_MK2206_60min_R1 2 ELKTDSSPNQAR 12 1 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 ELKT(0.002)DS(0.116)S(0.882)PNQAR;ELKTDS(0.017)S(0.983)PNQAR 155.66 7.8033e-14 242838000.0 7358.200000000001 7713.700000000001 8487.0 6190.0 8289.6 6045.5 5809.4 5303.299999999999 9613.5 9948.5 10395.3 True False 8600.084269282022 8106.294382123425 9690.584218062562 7706.550277879661 7070.210821166721 6685.230797321881 6864.892781908386 6055.059015675094 7436.057599604925 7701.126940466677 7813.86011431537 1.1006191745775242 1.037425070775493 1.240178871427317 0.9862667318245034 0.9048294591572932 0.8555605935501986 0.8785533246662005 0.7749126458742117 0.9516496956455245 0.9855726654688686 1.0 12.931819712926194 -6.469558308813377 8.478525676690966 0.9401861441631062 1.1170458642566172 0.5806107566433152 0.07808535844308565 0.2577088600941685 38.503553057156864 0.012228690558231566 0.028358746500112067 3.3918894663551256e-07 6.469558308813377 0.17685972009351103 ELKTDSS(ph)PNQAR ddPTM_A549_PD325901_60min_R1 8 ELKTDSSPNQAR 12 1 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 ELKT(0.004)DS(0.361)S(0.635)PNQAR;ELKT(0.004)DS(0.493)S(0.503)PNQAR;ELKT(0.017)DS(0.278)S(0.704)PNQAR;ELKTDS(0.089)S(0.911)PNQAR;ELKT(0.005)DS(0.351)S(0.644)PNQAR;ELKTDS(0.114)S(0.886)PNQAR;ELKT(0.005)DS(0.299)S(0.696)PNQAR;ELKT(0.001)DS(0.161)S(0.838)PNQAR 182.57 3.1844e-19 1079331400.0 39141.700000000004 39935.799999999996 39508.299999999996 41546.799999999996 50423.2 46817.8 46353.1 47428.600000000006 46673.4 45918.899999999994 49572.2 True False 43115.3365694034 43301.33002070231 42189.57082070787 44113.05147637114 46881.648382596606 46436.53135919212 48117.09258588958 46482.59936598308 44711.87930912059 43019.57281743149 43475.13366406682 0.9917240715705768 0.9960022286600084 0.9704299277538162 1.0146731650610559 1.0783554743005965 1.0681170463559255 1.1067727349084482 1.069176686727521 1.0284471959214692 0.9895213468426467 1.0 15.407902842646347 -6.5168961588034735 24.858879744600518 1.0336372306117265 0.9879644947449325 0.3400495331657488 0.0347605386375787 306.6626494610716 1274242.980411894 0.005848405718985872 0.012500556435243372 3.0416121979210087e-07 6.5168961588034735 -0.04567273586679399 ELLAKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A549_PD325901_60min_R1 1 ELLAKPIGPDDAIDALSSDFTCGSPTAAGK 30 1 P20810-5;F8W7E0;E9PCH5;P20810-3;P20810-2 P20810-5 CAST Calpastatin 1 ELLAKPIGPDDAIDALSSDFT(0.015)CGS(0.978)PT(0.007)AAGK 242.6 3.599499999999999e-121 74244000.0 12289.0 13781.0 15401.0 12827.0 14454.0 14048.0 13821.0 15243.0 12207.0 14565.0 16740.0 True False 13536.570233316357 14942.373234423701 16446.204473736456 13619.294657769376 13438.800903593006 13933.597745599554 14346.965718141402 14938.966407097832 11693.982240985983 13645.363414321553 14681.086123603134 0.9220414701847767 1.0177975327316207 1.1202307741588342 0.927676232065236 0.915381926817194 0.949084940193776 0.977241438225435 1.017565477194504 0.7965338628580951 0.9294519015445033 1.0 13.841671083913981 -6.476655239379988 23.93627571023158 0.9204144467743748 1.0204929286793099 0.1735718734031012 0.07066211581627767 323.53333451163485 167536.9616127092 0.0125124335598652 0.029074938459349806 3.3369120529586956e-07 6.476655239379988 0.10007848190493507 ELLDEKEPEVLQDS(ph)LDR ddPTM_A549_MK2206_60min_R1 2 ELLDEKEPEVLQDSLDR 17 1 A0A087X288;A0A075B7A3;P0DPF2;A0A087WUL8;A0A075B762;A0A087WVU4;A0A087WZJ2;A0A087WVC7;P0DPF3;A0A087WZE1;A0A075B757;A0A087WYQ9;A0A075B6G5;A0A087WTW4;H7BY70;A0A087WVG0;A0A087WYI5;A0A087WVG8;A0A087WTH4;A0A087WVE3;Q9H094-4;Q86T75;Q6P3W6;Q6P3W6-2;Q3BBV0;Q8N660;Q9H094;Q9H094-3;Q9H094-2;Q9H094-5;Q3BBV2 A0A087X288 NBPF19;NBPF8;NBPF10;NBPF14;NBPF9;NBPF11;NBPF3;NBPF1;NBPF15 Neuroblastoma breakpoint family member 3;Neuroblastoma breakpoint family member 11;Neuroblastoma breakpoint family member 10;Neuroblastoma breakpoint family member 1;Neuroblastoma breakpoint family member 15;Putative neuroblastoma breakpoint family member 8 1 ELLDEKEPEVLQDS(1)LDR;ELLDEKEPEVLQDS(1)LDR 72.145 0.0002369 3785600.0 1284.96 1507.1 1216.81 1533.69 1711.1399999999999 1631.28 1676.18 1703.41 2498.2 2279.8 2081.46 True False 1501.829833744207 1583.804952655432 1389.3719550348435 1909.4441188499602 1459.4335727334512 1803.9009668439735 1980.7202091746472 1944.8735839743388 1932.3616888056397 1764.7915966101364 1564.5760366264446 0.9598957152523365 1.0122901767500216 0.8880181739397095 1.2204227050333225 0.932798111800496 1.1529647167123713 1.2659788740248745 1.2430674754343647 1.235070487831463 1.1279679320766018 1.0 10.611556058292544 -6.2574870223617065 24.969971018356283 1.1298531001204448 0.959290237311884 0.40922770123693686 0.10213206840523811 340.3054035681495 2149951.6914027776 0.01698039897822868 0.04318473089815783 5.527299244376421e-07 6.2574870223617065 -0.1705628628085608 ELLDEKEPEVLQDS(ph)LDR ddPTM_A549_PD325901_60min_R1 2 ELLDEKEPEVLQDSLDR 17 1 A0A087X288;A0A075B7A3;P0DPF2;A0A087WUL8;A0A075B762;A0A087WVU4;A0A087WZJ2;A0A087WVC7;P0DPF3;A0A087WZE1;A0A075B757;A0A087WYQ9;A0A075B6G5;A0A087WTW4;H7BY70;A0A087WVG0;A0A087WYI5;A0A087WVG8;A0A087WTH4;A0A087WVE3;Q9H094-4;Q86T75;Q6P3W6;Q6P3W6-2;Q3BBV0;Q8N660;Q9H094;Q9H094-3;Q9H094-2;Q9H094-5;Q3BBV2 A0A087X288 NBPF19;NBPF8;NBPF10;NBPF14;NBPF9;NBPF11;NBPF3;NBPF1;NBPF15 Neuroblastoma breakpoint family member 3;Neuroblastoma breakpoint family member 11;Neuroblastoma breakpoint family member 10;Neuroblastoma breakpoint family member 1;Neuroblastoma breakpoint family member 15;Putative neuroblastoma breakpoint family member 8 1 ELLDEKEPEVLQDS(1)LDR;ELLDEKEPEVLQDS(1)LDR 89.51100000000001 1.8288e-06 6395500.0 3557.8 3347.1 3567.3 3324.9 3687.2 3359.5 3494.3999999999996 3585.3999999999996 3345.8 3813.7 3681.6 True False 3918.9852368860684 3629.1718636484693 3809.3984299175377 3530.2715216042266 3428.22379214945 3332.141345838675 3627.381304209053 3513.8863843081126 3205.187661332915 3572.9023311498854 3228.7865395852623 1.2137641150441187 1.1240048913591656 1.1798235600941445 1.0933740829016494 1.0617684848840474 1.032010417841586 1.1234503302516214 1.088299378490184 0.9926910999030061 1.1065774362429128 1.0 11.656776349813002 -4.243731644380806 0.2104658953312374 0.9775661024129848 1.5065198596143095 0.39693156467739077 0.051094664533866685 7.119773705562745 0.18265095336503187 0.032276556515827816 1.0551948565917542 5.705166922970817e-05 4.243731644380806 0.5289537572013246 ELLDT(ph)SFEDLSKPK ddPTM_A549_MK2206_60min_R1 1 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.545)S(0.455)FEDLSKPK 94.544 2.1144e-05 18267000.0 2512.7 2864.2 2276.7 1852.4 3994.2 3572.8 2885.7 3369.1 4319.8 3605.4 3536.7 True False 2936.7823303831005 3009.975546012664 2599.5702944813297 2306.238083157397 3406.6584710847465 3950.871324567302 3409.9943368941767 3846.680242436021 3341.3721973030997 2790.9376359409516 2658.4397820456534 1.1047014682135339 1.1322338637651992 0.9778556249564457 0.8675156378312848 1.2814503055861373 1.4861616769544166 1.2827051264897211 1.4469691088793533 1.2568921891215208 1.0498404570944775 1.0 11.37636407208038 -6.7776044590412825 24.9975648978603 1.1986875744637095 1.0255006125241706 0.3067929716003127 0.15611995810066348 342.74530536810164 530018.666821969 0.027594742547292016 0.05226140604202783 1.668766377515714e-07 6.7776044590412825 -0.17318696193953897 ELLDT(ph)SFEDLSKPK ddPTM_A549_PD325901_60min_R1 1 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.535)S(0.465)FEDLSKPK 146.16 1.5817e-13 19013000.0 3908.8 4025.8 3920.7 4156.0 4280.2 3597.2 3844.6 4469.7 3829.5 4360.9 3822.8 True False 4305.618498493529 4365.068294546329 4186.782279084378 4412.706681039176 3979.5735178883906 3567.9055958478607 3990.9083568458427 4380.5483270881805 3668.559432444976 4085.5520297641483 3352.6198347258082 1.2842549142902333 1.3019872546638807 1.2488091359832905 1.316196556297015 1.1870041084493725 1.0642141882274163 1.1903849984745547 1.306604548990399 1.0942366308421625 1.2186147643245338 1.0 11.711073184838025 -8.503853436654692 0.16680564622815056 0.8878085610427431 1.408215569381028 0.11847650973502455 0.09598565929698906 1.5572295695953928 0.2192349779042114 0.2824762145029755 0.30603967991012265 3.134343307024485e-09 8.503853436654692 0.520407008338285 ELLDTS(ph)FEDLSKPK ddPTM_A549_MK2206_60min_R1 1 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.126)S(0.874)FEDLSKPK 114.59 1.1872e-06 13804000.0 2792.7 2921.5 2163.0 2204.5 4078.0 3059.1 3143.8 3314.6 4727.3 3199.6 3454.7 True False 3264.03948504035 3070.191871264577 2469.7459247872425 2744.6025989637665 3478.1316020939335 3382.8119315337635 3714.9877659936615 3784.4547005367754 3656.5740979468815 2476.8081377812905 2596.8026451305223 1.2569455330619823 1.1822969593094592 0.9510718611668337 1.056916128805705 1.3393900412940751 1.302683489589458 1.430600732389094 1.4573516811658047 1.408106274384626 0.9537914413425898 1.0 11.34252065920572 -6.752122037080922 24.991132849618047 1.2524351299886503 1.1053614372528835 0.1629678303218337 0.16949496068377884 360.81375665827113 967773.5337867247 0.02824978467909467 0.05818079876256336 1.769611626227588e-07 6.752122037080922 -0.14707369273576676 ELLDTS(ph)FEDLSKPK ddPTM_A549_PD325901_60min_R1 1 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.164)S(0.836)FEDLSKPK 126.63 4.9481000000000005e-08 17052000.0 4152.9 3563.7 3957.7 3454.8 4557.3 3651.9 4537.0 3818.8 3958.7 4192.5 4457.9 True False 4574.499350796606 3864.0255058062367 4226.293321583452 3668.1951495799185 4237.210969831497 3622.1601371835854 4709.65801774166 3742.6310382093566 3792.329605750078 3927.784834503473 3909.606560956415 1.170066419593264 0.988341267992187 1.081002207175948 0.9382517377100371 1.0837947255733424 0.926476892420983 1.2046373322510302 0.957290965179317 0.9700028753845638 1.004649642684918 1.0 11.932807715438537 ELLEIVK ddPTM_A549_PD325901_60min_R1 2 ELLEIVK 7 0 P31153-2;P31153 P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2 0 ; 103.92 0.028369 2296600.0 1244.03 1044.27 1182.55 1002.56 1025.83 1373.03 924.0799999999999 870.75 1146.19 1086.97 1365.91 False True 1370.323009793518 1132.2742977658831 1262.8049542508309 1064.4858542210382 953.7792397213794 1361.8484989066453 959.2463700759785 853.3822081598394 1098.0196202830941 1018.3385286965395 1197.9117292168908 1.1439265317898986 0.9452067879042167 1.0541719589609184 0.8886179409203406 0.7962016035562923 1.1368521283257864 0.8007654877067322 0.712391562204437 0.916611461013827 0.850094797353939 1.0 10.226305888520935 -6.253919400695419 23.88268063300863 0.927673272116056 1.0375122743294103 0.2147563214659889 0.11928251424741375 492.4428713910506 1563936.3156998344 0.016656841995368852 0.04307838670135945 5.572891648242645e-07 6.253919400695419 0.1098390022133543 ELLHSVHPES(ph)PNLK ddPTM_A549_PD325901_60min_R1 2 ELLHSVHPESPNLK 14 0 Q9Y217 Q9Y217 MTMR6 Myotubularin-related protein 6 1 ELLHS(0.001)VHPES(0.999)PNLK;ELLHSVHPES(1)PNLK 130.72 1.1341e-08 7893300.0 1106.17 1121.58 1241.8000000000002 958.77 1019.45 1254.21 1233.96 1310.1 1062.8 1394.3400000000001 1483.33 True False 1218.4675640806865 1216.0994827853526 1326.076015550024 1017.9910453753444 947.8473489115745 1243.9961295919998 1280.9190230488207 1283.9690277464315 1018.1342119865573 1306.301134440447 1300.889813603597 0.9366416366236334 0.9348212816092651 1.0193607496061936 0.7825344120078899 0.7286146290022373 0.9562655626812882 0.9846483611863673 0.9869929138654001 0.7826444648422775 1.004159707286707 1.0 10.34528305448127 -7.231768359244177 0.0052278843858691035 1.7905866656645142 3.3575654537222317e-07 0.00574014704686332 0.09890497887291338 44761.47906247445 77.32600439701623 13021.531537164343 13462.387319009735 5.864508779112001e-08 7.231768359244177 -1.7905863299079687 ELLS(ph)AEENKR ddPTM_A549_MK2206_60min_R1 2 ELLSAEENKR 10 1 Q9NWH9;H7BXE3;H0YL55;H0YKU6 Q9NWH9 SLTM SAFB-like transcription modulator 1 ELLS(1)AEENKR;ELLS(1)AEENKR 88.021 0.00029801 31317000.0 3461.7 3654.6 3369.6 2981.8 4559.6 4024.8 3573.3 3447.1000000000004 4909.7 4957.9 4541.6 True False 4045.9503295607033 3840.603529941304 3847.4599482954686 3712.3411338580872 3888.888880065599 4450.701664553987 4222.52235645561 3935.736981301007 3797.6607891798276 3837.9069465889065 3413.7953782165696 1.185176579527266 1.125024526791558 1.1270329712337515 1.087452738833305 1.139168710837387 1.303740022894728 1.2368996640511987 1.1528918828629704 1.1124453484859413 1.1242346190631674 1.0 11.73716087094826 -9.708980684613994 0.8472145387331976 1.0153797473225226 1.167823299891145 0.2256465511433492 0.06601339243517011 0.33031650851207 0.4977971951589151 0.02292868824468315 0.0134903737078 1.9544263775807716e-10 9.708980684613994 0.15244355256862252 ELLS(ph)AEENKR ddPTM_A549_PD325901_60min_R1 2 ELLSAEENKR 10 1 Q9NWH9;H7BXE3;H0YL55;H0YKU6 Q9NWH9 SLTM SAFB-like transcription modulator 1 ELLS(1)AEENKR;ELLS(1)AEENKR 75.08800000000001 0.00065624 43506000.0 4971.0 5813.4 6072.5 5700.9 6974.4 6195.1 6046.299999999999 6554.9 6085.9 5996.200000000001 6188.4 True False 5475.652260543216 6303.315620129073 6484.616366908942 6053.031645316709 6484.542204373817 6144.649159578858 6276.395255162313 6424.157377280428 5830.130787287339 5617.598908682106 5427.266031499735 1.0089153965850666 1.1614163712529966 1.1948219101979465 1.1153003390998422 1.1948082453923714 1.1321813089528774 1.156456163883298 1.183682049119162 1.0742297785753243 1.0350697526300874 1.0 12.406009912509285 -9.292884895551367 1.1629510023324723 1.0184380315652577 1.1463367105748092 0.4554214786706572 0.0517767949916649 0.22483502438751476 0.6342022209072639 0.012208892694635109 0.010192586296354236 5.094658808749574e-10 9.292884895551367 0.12789867900955154 ELLS(ph)PGVK ddPTM_A549_MK2206_60min_R1 2 ELLSPGVK 8 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 ELLS(1)PGVK;ELLS(1)PGVK 111.65 0.0014999 7653800.0 2585.0 2832.6000000000004 2332.32 2307.41 3285.6 2533.9 2639.6000000000004 3236.1 3516.7 3321.8999999999996 3745.6 True False 3021.2848028178123 2976.76724098718 2663.078046833001 2872.7255535835725 2802.2925924080005 2802.0356161333098 3119.181152464175 3694.8270851406082 2720.1730650159284 2571.4804828402516 2815.4641466989565 1.0731036324366532 1.0572918303638659 0.9458753186238853 1.0203381765495942 0.9953217112331552 0.9952304380855316 1.1078745776682388 1.3123332042685314 0.9661543970308576 0.9133415837865426 1.0 11.459157063785396 ELLS(ph)PGVK ddPTM_A549_PD325901_60min_R1 2 ELLSPGVK 8 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 ELLS(1)PGVK;ELLS(1)PGVK 98.044 0.0024446 12964200.0 5855.799999999999 6095.6 5902.4 6153.5 5675.0 6667.6 5749.5 5684.6 6298.9 6856.200000000001 7419.5 True False 6450.276505187879 6609.297604510063 6302.972358014544 6533.587719387525 5276.407577687169 6613.301276235736 5968.300368747119 5571.216193517569 6034.1791380147915 6423.298361913587 6506.948536085627 0.9912905364805851 1.0157291959290653 0.9686525601147925 1.0040939594272438 0.8108881679985266 1.0163444876750305 0.91721954394578 0.8561949065097471 0.9273439162075748 0.9871444850519193 1.0 12.66776542806184 ELLS(ph)PLSEPDDRYPLIVK ddPTM_A549_MK2206_60min_R1 2 ELLSPLSEPDDRYPLIVK 18 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ELLS(0.99)PLS(0.01)EPDDRYPLIVK;ELLS(0.988)PLS(0.012)EPDDRYPLIVK 219.34 1.0430999999999998e-56 59518000.0 14838.0 16318.2 14693.2 13635.5 24948.0 20107.3 18328.0 19480.0 28692.0 22017.0 22475.0 True False 17342.291645729463 17148.726679332416 16776.916699992562 16976.19811212086 21278.182248415764 22235.041139854493 21657.960358525303 22241.349654998005 22193.307811708994 17043.344408529407 16893.837221555714 1.0265454448443212 1.0150877183456861 0.9930791021583915 1.0048752032759056 1.2595233379700048 1.3161628615364935 1.2820036131809533 1.3165362826285034 1.313692533002 1.008849806294033 1.0 14.044209434849918 -6.74924214013488 24.590003959772726 1.1939201258623304 1.0090663029204225 0.44443141703549927 0.10823245728745913 190.07679377461693 383197.2751955865 0.019845534052848633 0.04106179255607795 1.7813852822424545e-07 6.74924214013488 -0.18485382294190789 ELLTLDEKDPR ddPTM_A549_MK2206_60min_R1 2 ELLTLDEKDPR 11 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 ; 87.29799999999999 0.0003113 17538200.0 3812.5 3545.8 3501.8 3083.5 4604.8 3455.1000000000004 3130.3 2958.9 4974.1 4827.4 4274.8 False True 4455.956793324142 3726.26607466368 3998.4078961719692 3838.957638423576 3927.440019941677 3820.7163886902395 3699.034990740491 3378.333136251208 3847.474292005497 3736.8869872250925 3213.2491815219714 1.3867448621627148 1.1596567412486558 1.2443503974622048 1.1947276484188614 1.2222643804055762 1.1890507622818527 1.1511821156018858 1.051376020160081 1.1973781286962382 1.1629620910554772 1.0 11.649817148137663 -14.999999999999792 0.0808686285984283 0.3601020280751669 1.3986125292028824 0.3892929672262079 0.0744038626237202 75.35778150449214 0.45009703528993905 8.76789098285971 0.8813931809584561 1.0000000000004785e-15 14.999999999999792 1.0385105011277154 ELLTLDEKDPR ddPTM_A549_PD325901_60min_R1 3 ELLTLDEKDPR 11 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 ;; 87.29799999999999 0.0003113 23040600.0 4341.4 4087.7999999999997 5242.1 5405.400000000001 5607.6 5835.1 5403.6 5251.9 5537.700000000001 5204.4 5990.8 False True 4782.135732030237 4432.293252135346 5597.860429308089 5739.279281445899 5213.741521169793 5787.580880221236 5609.236954963376 5147.146734464152 5304.969726870491 4875.79329581154 5253.96957881013 0.9101947889681634 0.8436084727272308 1.0654535290582783 1.0923701013787899 0.992343302138143 1.1015634547187374 1.067618849105271 0.9796681646622382 1.0097069743734435 0.928020846461727 1.0 12.359192131759665 -5.7589394747210125 24.99996642925747 1.0217556953739027 0.8769015983265316 0.5508816703924025 0.05189731826029055 30.987869071888916 309869.6675482004 0.006258471732583245 0.022174978259098012 1.7420496365346665e-06 5.7589394747210125 -0.14485409704737107 ELLTTMGDR ddPTM_A549_MK2206_60min_R1 1 ELLTTMGDR 9 0 J3QRS3;P19105;O14950;P24844;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 0 55.676 0.047566000000000004 708980.0 702.16 927.69 816.09 720.74 1093.8 875.35 854.11 940.98 1061.4 927.97 897.31 False True 820.6674418361916 974.9054585156379 931.8238334533614 897.3213323552479 932.9034689480986 967.9789559896969 1009.2907312210857 1074.3667966303906 820.9945947075115 718.340932496845 674.4831625038556 1.2167352536861888 1.445411112853488 1.3815375761111528 1.3303835918218618 1.3831382617246073 1.4351417645420668 1.4963912923702023 1.592874153658727 1.217220295996371 1.0650242621775434 1.0 9.397638618603738 -9.313194590474135 1.462918993098501 1.0612761445578274 1.407460674140041 0.6624970683273684 0.10076152036014564 0.150991130406885 0.6681950573020988 0.024286354804417994 0.020885724714683293 4.861893143496457e-10 9.313194590474135 0.3461845295822137 ELLTTMGDRFT(ph)DEEVDELYR ddPTM_A549_PD325901_60min_R1 4 ELLTTMGDRFTDEEVDELYR 20 1 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 1 ELLT(0.001)T(0.004)MGDRFT(0.995)DEEVDELYR;ELLTTMGDRFT(0.999)DEEVDELYR;ELLTTMGDRFT(1)DEEVDELYR;ELLTTMGDRFT(1)DEEVDELYR 148.09 1.5912999999999999e-21 53150300.0 5362.879999999999 5938.7 5337.5599999999995 5027.2300000000005 6452.5 6304.099999999999 5845.2 6213.700000000001 6299.799999999999 6682.6 6135.6 True False 5907.315629656405 6439.175090869465 5699.798918955697 5337.750579432282 5999.298659916561 6252.761499717693 6067.642284616168 6089.762878946647 6035.04131414463 6260.659495540349 5380.9600967729575 1.0978181446093813 1.196659141689442 1.0592531474771487 0.9919699242210347 1.1149123115621002 1.1620159576109044 1.1276133209489927 1.13172422196529 1.121554742203707 1.1634837246414371 1.0 12.393647892997011 -10.653718758991904 0.8795359323590797 0.9986108321491751 1.111666137272894 0.0 0.06937738533897674 0.5217316425124011 0.7055312690281207 0.03817951725959783 0.009734194668827896 2.2196333476521132e-11 10.653718758991904 0.11305530512371886 ELLVSQHTVQLVGGLS(ph)PLSSPSDTK ddPTM_A549_MK2206_60min_R1 1 ELLVSQHTVQLVGGLSPLSSPSDTK 25 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 ELLVS(0.004)QHT(0.004)VQLVGGLS(0.707)PLS(0.121)S(0.135)PS(0.023)DT(0.006)K 40.141999999999996 0.013701 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ELLVSQHTVQLVGGLS(ph)PLSSPSDTK ddPTM_A549_PD325901_60min_R1 2 ELLVSQHTVQLVGGLSPLSSPSDTK 25 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 ELLVSQHTVQLVGGLS(0.967)PLS(0.024)S(0.007)PS(0.002)DT(0.001)K;ELLVSQHTVQLVGGLS(0.987)PLS(0.01)S(0.002)PS(0.001)DTK 99.98700000000001 1.8762000000000002e-10 6811800.0 2538.4 2941.7 3148.6 3317.1 3516.5 3218.3 3215.8 4024.3999999999996 3734.6 3502.8 3552.2 True False 2796.0964993286857 3189.607382897048 3362.2829300699027 3521.9897333193085 3269.513171266418 3192.0912318239657 3338.17902875328 3944.1301849192746 3577.6477494213345 3281.632610208411 3115.3019192510765 0.8975362811707418 1.0238517696107716 1.0792799597665323 1.1305452327285184 1.0495012220364228 1.0246490756155504 1.071542699641704 1.2660507029981383 1.1484112430044684 1.0533915155797549 1.0 11.605156273368385 -5.310948771740734 2.092259885277659 1.0847278035730434 0.8572600843836059 0.4045814236627455 0.06894115431422153 0.5730507527501836 2.9685330448089395 0.0113508294143452 0.23523013360001915 4.887100029170887e-06 5.310948771740734 -0.22746771918943753 ELNEDRDS(ph)GIAR ddPTM_A549_PD325901_60min_R1 1 ELNEDRDSGIAR 12 1 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-2;Q8TF40-3 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 ELNEDRDS(1)GIAR 40.857 0.028227999999999996 2093400.0 388.8 471.83 377.47 378.93 317.08 430.99 376.17 483.98 364.37 361.67 423.07 True False 428.27068978056775 511.5927699875289 403.08738411150574 402.33564548753003 294.80939466661647 427.4801603342788 390.48535519812253 474.3266392250349 349.05679603080705 338.83409447701183 371.03507206169485 1.1542593194784452 1.3788259076017009 1.0863862056805274 1.0843601475513092 0.794559374208151 1.1521287137599714 1.052421683557703 1.2783876106088563 0.940764963514734 0.9132131164696778 1.0 8.535411753704377 -5.964220794435133 3.7848649448155336 1.0067043052023887 1.266279297944178 0.315554436372526 0.1308311812533334 0.1651948737286383 5.066474892055823 0.017501396855620854 0.05821239115729759 1.0858734274096922e-06 5.964220794435133 0.2595749927417892 ELNGSEAATPRDS(ph)PRPGKPDER ddPTM_A549_MK2206_60min_R1 1 ELNGSEAATPRDSPRPGKPDER 22 3 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 ELNGS(0.005)EAAT(0.022)PRDS(0.974)PRPGKPDER 52.391000000000005 0.0026324 14531000.0 907.13 1003.1 849.78 895.85 1258.1 1089.7 1087.7 1317.4 1610.2 1520.1 1854.0 True False 1060.2313668008212 1054.153505413485 970.2915820460945 1115.3332902162344 1073.035156594993 1205.0113307156828 1285.3210105831497 1504.1454843682932 1245.4922709610285 1176.7083542447 1393.6006322030823 0.7607856528629352 0.7564243880594541 0.6962479491073443 0.8003249025892395 0.769973213128268 0.8646747876475437 0.9223022585396233 1.079323193180858 0.8937225214888745 0.8443655427914762 1.0 10.444601468186276 -7.466758814474421 1.7763009601651372 0.9592989569174009 0.750651015543629 0.698191877341463 0.06008253439513042 0.13130312629679303 0.8210628490039842 0.008901293286799807 0.01538266032773265 3.413824457962677e-08 7.466758814474421 -0.20864794137377185 ELNS(ph)NHDGADETSEK ddPTM_A549_MK2206_60min_R1 1 ELNSNHDGADETSEK 15 0 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(1)NHDGADETSEK 83.213 7.3732e-05 6676000.0 676.6 957.0 894.29 574.47 929.83 873.25 817.0 732.0 925.99 1284.7 1280.7 True False 790.7935387181934 1005.7072123225056 1021.113769337949 715.2151757889386 793.0532387383524 965.6567353835632 965.4383245807054 835.7632416559823 716.2547435021751 994.4853777371006 962.6668444781488 0.8214612804566609 1.044709515125857 1.0607135533908238 0.7429519151837507 0.8238086138390461 1.0031058417795984 1.0028789607936055 0.8681749521653468 0.7440317983429137 1.0330524868924933 1.0 9.910892792642178 ELNS(ph)NHDGADETSEKEQQEAIEHIDEVQNEIDR ddPTM_A549_PD325901_60min_R1 1 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(0.419)NHDGADET(0.291)S(0.291)EKEQQEAIEHIDEVQNEIDR 57.82899999999999 0.00114 4479400.0 239.9 699.34 253.17 299.05 280.13 564.06 251.39 459.18 426.66 469.34 289.62 True False 264.254471394954 758.2758361339431 270.35163863488435 317.5216393081728 260.4546351960366 559.4664823734969 260.9567840158863 450.0212946802585 408.7289639501172 439.7057923019345 253.99857605244566 1.0403777670800434 2.985354673710353 1.0643824970855826 1.250092202259476 1.025417698177402 2.2026362945356754 1.0273946731181827 1.7717473132106774 1.6091781706119597 1.731134871445673 1.0 7.988676598867309 -10.71399434579393 0.7473585648798459 0.9578728111076349 1.5707436083816162 0.0 0.6170704711737319 1.3857036512434777 1.2257054916115873 0.5217985863639681 0.10471381633307024 1.9319934700376288e-11 10.71399434579393 0.6128707972739813 ELNS(ph)NHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILK ddPTM_A549_PD325901_60min_R1 1 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILK 44 2 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(0.413)NHDGADET(0.293)S(0.293)EKEQQEAIEHIDEVQNEIDRLNEQASEEILK 44.898 0.007656100000000001 3449600.0 515.0 817.13 668.98 861.19 787.69 789.22 867.0 1056.7 843.85 870.82 849.26 True False 567.2824208770378 885.9924128179848 714.3810057035395 914.3837503956036 732.3653717829792 782.7928539850568 899.9941594406038 1035.6232895348862 808.3859190674224 815.8362765849295 744.8064039026993 0.7616508369215726 1.1895606807023773 0.9591499240074544 1.2276797643043058 0.983296287391555 1.0510017769494366 1.2083598566348766 1.3904597008139834 1.0853638137797603 1.0953668930745517 1.0 9.540721667127592 ELNSNHDGADET(ph)SEKEQQEAIEHIDEVQNEIDR ddPTM_A549_MK2206_60min_R1 3 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.784)S(0.216)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR 176.71 8.883499999999997e-63 33704400.0 1181.49 1263.85 1568.06 1211.04 2515.52 1833.4099999999999 1743.3200000000002 2146.97 2579.0600000000004 2502.88 2692.4399999999996 True False 1380.8966273428298 1328.1745666601873 1790.4344867415102 1507.744854365652 2145.490340289193 2027.420229280938 2060.0586781004113 2451.30957231987 1994.9070279125256 1937.4776696743475 2023.8328404362812 0.6823175312468729 0.6562669308073242 0.884675083321379 0.7449947566028352 1.060112425009709 1.0017725717129302 1.0178996194450134 1.2112213634162774 0.9857074102436642 0.9573308778093955 1.0 10.98287441944099 -6.361369074776655 1.1575795069530925 1.01700126219072 0.6747177168585057 0.70029123856168 0.0889098988545141 0.22690884725770794 0.5456423595486094 0.013104215775613501 0.05739020229434702 4.351419215573771e-07 6.361369074776655 -0.3422835453322144 ELNSNHDGADET(ph)SEKEQQEAIEHIDEVQNEIDR ddPTM_A549_PD325901_60min_R1 2 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR;ELNS(0.236)NHDGADET(0.382)S(0.382)EKEQQEAIEHIDEVQNEIDR 49.148 0.0045939 6928300.0 496.51 343.36 517.86 422.21 639.66 463.91999999999996 563.1899999999999 329.28 305.45 354.05 245.76 True False 546.9153296886566 372.29615222202466 553.0050937451563 448.28895279151834 594.732488307203 460.141989332186 584.6225036393931 322.7122520848372 292.61299873098767 331.69522257744904 215.53307800099793 2.537500669322434 1.727327218981677 2.5657550983547677 2.079907905316708 2.7593559829570538 2.1349019537968807 2.7124491009063876 1.4972748270376532 1.3576245532466846 1.5389527475495584 1.0 7.751765487422706 -8.44606994176938 3.6736042526357937 1.1746574182131089 2.337830631668833 0.6977436046186105 0.3175308602981741 0.08055416004084033 2.0875332234030313 0.04875112278079326 0.058586532930636114 3.580387714338566e-09 8.44606994176938 1.1631732134557242 ELNSNHDGADETS(ph)EKEQQEAIEHIDEVQNEIDR ddPTM_A549_PD325901_60min_R1 3 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNSNHDGADET(0.168)S(0.832)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.22)S(0.78)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.151)S(0.849)EKEQQEAIEHIDEVQNEIDR 310.14 7.882099999999996e-219 56946000.0 3708.62 4500.8 4590.9 4417.7 5492.000000000001 4006.2999999999997 5001.400000000001 5253.3 4979.8 4902.599999999999 5631.2 True False 4085.116372258252 4880.098211558975 4902.466081324373 4690.571295675354 5106.26086637144 3973.674021084531 5191.731013871091 5148.518810365876 4770.516323720977 4593.04899931705 4938.598099117916 0.8271813762265643 0.9881545559316945 0.9926837501111911 0.9497778927410875 1.0339494657974841 0.8046157920390951 1.0512560264416713 1.0425061337316461 0.965965690662911 0.9300309333001638 1.0 12.269885852284775 ELNVS(ph)FINEK ddPTM_A549_MK2206_60min_R1 2 ELNVSFINEK 10 0 P49585;C9JEJ2;C9J050;Q9Y5K3-2;Q9Y5K3-4;Q9Y5K3-3;Q9Y5K3 P49585 PCYT1A;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B 1 ELNVS(1)FINEK;ELNVS(1)FINEK 131.13 1.1454e-06 7771400.0 2723.8 2827.4 2625.2 2023.69 3810.0 2890.5 2792.6 2659.7 4069.8 3849.6 4049.3 True False 3183.510849483619 2971.302583198176 2997.4928348365556 2519.4941408468962 3249.5540470764827 3196.370791441387 3299.9792720000974 3036.720619989638 3147.9967981351324 2979.9726863366855 3043.747055005362 1.045918334195484 0.9761989184718706 0.9848035269248991 0.8277606829068316 1.067616325651199 1.0501433705488237 1.0841831506903203 0.9976915180897935 1.034250462093535 0.9790474150722211 1.0 11.571632755970015 ELNVS(ph)FINEK ddPTM_A549_PD325901_60min_R1 1 ELNVSFINEK 10 0 P49585;C9JEJ2;C9J050;Q9Y5K3-2;Q9Y5K3-4;Q9Y5K3-3;Q9Y5K3 P49585 PCYT1A;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B 1 ELNVS(1)FINEK 139.89 1.3119999999999998e-07 6745100.0 2916.9 2892.9 2757.5 3570.6 3697.8 3476.2 3360.3 3647.9 3583.4 3253.5 3788.7 True False 3213.0215406917114 3136.6948356334333 2944.6405321945476 3791.1478525790385 3438.0792847174635 3447.8909797304364 3488.1780553267135 3575.139772777811 3432.802159609171 3048.0734547542147 3322.7139185480983 0.9669871133822082 0.9440159196744966 0.88621548661079 1.1409793155576957 1.034720222383688 1.0376731383594515 1.0497978883631718 1.0759697826588734 1.0331320251335925 0.9173445350619017 1.0 11.69814636882681 -6.236237379435125 24.999392326109543 1.0323564098410571 0.933567149581478 0.42387566194228343 0.05375251059408158 481.7667220000807 477893.1607827057 0.005977725413942978 0.01580967893521157 5.804470663566908e-07 6.236237379435125 -0.09878926025957913 ELNYFAK ddPTM_A549_MK2206_60min_R1 2 ELNYFAK 7 0 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ; 111.01 0.022803999999999998 10435400.0 5638.299999999999 6492.7 6255.9 5095.7 7402.3 6034.7 5681.8 5768.5 9461.9 7068.700000000001 8678.900000000001 False True 6589.907196799867 6823.150697436089 7143.080689263296 6344.146728754666 6313.431475767514 6673.287948490339 6714.10951358954 6586.202540290345 7318.794757549468 5471.87576057464 6523.6896045454905 1.0101503284595634 1.0459036390514265 1.0949449042281587 0.972478323360798 0.9677700593493174 1.022931554536349 1.0291889897568658 1.0095824509647573 1.1218796725782254 0.83877009671981 1.0 12.671472425290055 ELNYFAK ddPTM_A549_PD325901_60min_R1 2 ELNYFAK 7 0 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ; 126.67 0.016205 15556700.0 11486.1 12032.2 11469.099999999999 11414.6 14060.0 12759.4 12676.599999999999 12388.2 14369.099999999999 12703.8 13841.2 False True 12652.160416380091 13046.19572100958 12247.462095300998 12119.65391756251 13072.474104366805 12655.491676765587 13159.014949901686 12141.1076326451 13765.216696891264 11901.679899955925 12138.82014659592 1.0422891404259027 1.0747498985449682 1.0089499595012572 0.9984210797423517 1.0769147204172649 1.0425635707531722 1.0840439837632705 1.0001884438538142 1.133983083253065 0.9804643084108553 1.0 13.56734058274313 -6.787770119986046 24.99897862790115 1.06056968406012 1.0326378174965163 0.0 0.04657533721122714 538.5398069936342 511300.3237487509 0.007602382402249712 0.014370401687230853 1.6301586771216233e-07 6.787770119986046 -0.02793186656360369 ELPDSSS(ph)PVPANNIR ddPTM_A549_MK2206_60min_R1 2 ELPDSSSPVPANNIR 15 0 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 ELPDS(0.002)S(0.122)S(0.877)PVPANNIR;ELPDS(0.002)S(0.13)S(0.868)PVPANNIR 147.35 1.0086e-13 11629500.0 4387.5 5847.6 4560.0 4939.799999999999 6023.9 5779.2 4362.299999999999 4452.8 5451.6 5417.7 5985.1 True False 5128.00273592385 6145.217862880963 5206.676568206119 6150.051221756049 5137.792289812078 6390.751108077517 5154.873443474188 5083.998036128083 4216.82130441631 4193.837807243936 4498.8344896432955 1.1398513876713967 1.3659577557315754 1.1573389908413694 1.367032113742792 1.1420274076851946 1.420534834697648 1.14582420298883 1.1300700321009551 0.937314167508006 0.9322054005095125 1.0 12.135335576370531 -8.403291370068539 1.9801836981950176 0.9706786009070897 1.26182765340965 0.6371602773785034 0.09645111584240204 0.1313107350558147 1.0060110460482616 0.01499366205953195 0.018363384409975106 3.95101455832326e-09 8.403291370068539 0.2911490525025603 ELPDSSS(ph)PVPANNIR ddPTM_A549_PD325901_60min_R1 1 ELPDSSSPVPANNIR 15 0 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 ELPDS(0.001)S(0.115)S(0.884)PVPANNIR 138.01 6.7466e-10 10752000.0 3601.4 4032.9 3617.6 4546.0 5043.9 3673.3 3864.0 4219.1 5016.4 4182.3 4901.3 True False 3967.0114767894484 4372.76663646378 3863.1120903960104 4826.796095284914 4689.6338645103615 3643.3858626787323 4011.046634461933 4134.946740680079 4805.578153000906 3918.228864244218 4298.471171900597 0.922888933796294 1.0172841602495457 0.8987176919201973 1.1229099608339852 1.0910004224680676 0.8476003948789508 0.9331333104389351 0.9619575368355407 1.1179738006422615 0.9115401052025079 1.0 12.069607915428628 -8.737223561009719 24.980255865142357 1.0557098606749344 0.9765707590748225 0.0 0.09125825514646126 324.27477059123237 334511.41069926025 0.014670685993563594 0.016630945882096522 1.8313714478130787e-09 8.737223561009719 -0.07913910160011195 ELPELLQR ddPTM_A549_PD325901_60min_R1 2 ELPELLQR 8 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ; 75.38 0.013434 2166340.0 1200.1599999999999 1200.82 1153.62 1141.25 1226.05 1419.15 1330.12 1315.27 1231.74 1232.72 1281.99 False True 1321.9993596889042 1302.0173156781557 1231.9115904806079 1211.7424205331947 1139.9364776428818 1407.5929129176839 1380.7384444695929 1289.0359080406463 1179.9742512912321 1154.885848822688 1124.3133572041806 1.1758282076949682 1.1580555432658648 1.0957012852217558 1.0777621850428096 1.0138956993960748 1.2519578317720352 1.2280726148296077 1.1465094671169607 1.0495065665905303 1.02719214480786 1.0 10.134828469579668 -8.88561731235862 3.0897633048132715 1.0202775131956652 1.1424358544928965 0.4104110863356967 0.06346459632245667 0.18793792837522855 3.4093042120935606 0.012528685362150398 0.013123037661979722 1.3013157544908015e-09 8.88561731235862 0.12215834129723135 ELPESGIQLGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 ELPESGIQLGTPR 13 0 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 ELPESGIQLGT(1)PR;ELPESGIQLGT(1)PR 196.37 2.5635999999999998e-30 50869000.0 7916.9 8073.7 7243.7 8006.6 8868.400000000001 8284.9 8697.5 8471.1 8378.6 8897.5 9102.4 True False 8720.617859886252 8754.099033652616 7735.301041906671 8501.149497692073 8245.514178319101 8217.43052124984 9028.488121954617 8302.137265050613 8026.476579366364 8335.710331543147 7982.8625048676895 1.0924173947088156 1.0966115260427762 0.9689883844535637 1.0649249554916358 1.0329019412887614 1.0293839479559017 1.1309837939021672 1.0399950218343659 1.005463463071308 1.0442006644183464 1.0 12.962690447283673 -8.686470383394125 4.275715382443529 1.002469447076836 1.057193755227364 0.14274107503240008 0.04184990934966865 0.20611261257586047 7.230947727758187 0.006714953063163964 0.007545780066487057 2.0583992577893183e-09 8.686470383394125 0.05472430815052798 ELPPLS(ph)PSLSR ddPTM_A549_MK2206_60min_R1 2 ELPPLSPSLSR 11 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ELPPLS(0.796)PS(0.204)LSR;ELPPLS(0.84)PS(0.16)LSR 167.71 5.7684e-15 36222000.0 3064.9 3098.7 2827.8 2785.6 4052.1 2892.3 2935.2 3281.0 4713.8 3884.1 4394.200000000001 True False 3582.1801903892897 3256.4105943821814 3228.8245613099234 3468.072125050336 3456.04145778441 3198.3612662466453 3468.4878461557964 3746.091797641091 3646.1318263918106 3006.6791123753956 3302.9988662496166 1.0845235906655544 0.9858951595946704 0.9775433453224541 1.0499767833672167 1.0463344365929392 0.9683204250924307 1.0501026450832798 1.1341486780147108 1.103885279419367 0.910287661039776 1.0 11.689560759082275 -7.97631055872359 24.981167626830594 1.0584912532320399 1.0173314092052472 0.0 0.06365052643051129 398.4093287701413 420132.6111778622 0.008543208274213085 0.011803911809375544 1.0560620619513731e-08 7.97631055872359 -0.041159844026792625 ELPPLS(ph)PSLSR ddPTM_A549_PD325901_60min_R1 4 ELPPLSPSLSR 11 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ELPPLS(0.998)PS(0.002)LSR;ELPPLS(0.991)PS(0.008)LS(0.001)R;ELPPLS(0.674)PS(0.308)LS(0.018)R;ELPPLS(0.5)PS(0.5)LS(0.001)R 140.14 3.8819e-09 66412500.0 5567.0 5284.99 5588.3 6345.0 5834.6 6062.120000000001 6527.2 6300.13 5878.599999999999 6106.0599999999995 6899.200000000001 True False 6132.157741791206 5730.37465497402 5967.555643177805 6736.9162394594705 5424.797824277281 6012.752104609481 6775.596167820889 6174.468964793629 5631.542885382173 5720.52232953328 6050.642137632184 1.0134722236590448 0.9470688440378503 0.9862681526085273 1.113421697435877 0.8965656373127007 0.9937378492793277 1.1198143955134658 1.0204650720278596 0.9307347480289062 0.9454405333203045 1.0 12.562872544341419 -8.736111385943214 24.841151541894323 0.967291399907752 1.0109772803634323 0.11826419649704722 0.06281457357998795 399.8443548823953 392158.5779990899 0.010860390808302464 0.01231229787801221 1.8360673764503566e-09 8.736111385943214 0.043685880455680226 ELPPPSEEIKT(ph)GEDEDEEDNDALLKENESPDVR ddPTM_A549_PD325901_60min_R1 2 ELPPPSEEIKTGEDEDEEDNDALLKENESPDVR 33 2 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 ELPPPS(0.171)EEIKT(0.825)GEDEDEEDNDALLKENES(0.004)PDVR;ELPPPS(0.172)EEIKT(0.827)GEDEDEEDNDALLKENESPDVR 53.262 0.001927 12571200.0 1792.2399999999998 2311.46 2053.5699999999997 2804.0 2543.69 2161.3999999999996 2347.0 2177.7 2412.8999999999996 2158.0 3024.1 True False 1974.1868854226464 2506.254846269577 2192.9376093195856 2977.1967116539586 2365.029989654109 2143.798275009885 2436.3163693276806 2134.264065127399 2311.4942040857763 2021.743511713415 2652.1548713493576 0.744370891288948 0.9449881201675262 0.8268512646110547 1.1225576393807 0.8917390214285769 0.8083231858625088 0.9186176854325769 0.80472829403116 0.8715532524349678 0.7623022069917044 1.0 11.372949308077882 -10.671904039667474 0.9852254624515102 0.9986510141291403 0.8860637340518638 0.0 0.11700634710833761 0.7570026972460819 1.331431540287998 0.05781749155184053 0.016095344325008164 2.1286093247963943e-11 10.671904039667474 -0.11258728007727647 ELPPPSEEIKTGEDEDEEDNDALLKENES(ph)PDVR ddPTM_A549_MK2206_60min_R1 1 ELPPPSEEIKTGEDEDEEDNDALLKENESPDVR 33 2 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVR 105.31 7.763500000000001e-15 15513000.0 1864.4 1838.2 1584.5 1827.5 2429.6 2375.5 1926.5 2140.6 2093.9 2545.3 3086.6 True False 2179.0651397963343 1931.7565284129882 1809.2059259479356 2275.2375820395937 2072.2090584716584 2626.87383327072 2276.5201129800857 2444.0366053125626 1619.6349932712062 1970.3149622123778 2320.112034173696 0.9392068605740432 0.8326134686426814 0.7797924838540313 0.9806584977478968 0.8931504289230033 1.1322185284928608 0.9812112861139762 1.0534131840676402 0.6980848206530839 0.8492326806597951 1.0 11.179978756930579 -4.898117592601829 17.528825862975694 0.8957115680570911 3.597961217265592 0.0 0.12241857586573762 933.3250624828348 162168.88711010487 0.019652401052065862 991.7935510208716 1.2643939449976781e-05 4.898117592601829 2.702249649208501 ELPPPSEEIKTGEDEDEEDNDALLKENES(ph)PDVR ddPTM_A549_PD325901_60min_R1 2 ELPPPSEEIKTGEDEDEEDNDALLKENESPDVR 33 2 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVR;ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVR 190.92 4.198199999999999e-77 74160000.0 5465.6 6101.5 7137.9 6519.3 8431.1 5737.8 7061.2 6808.8 6757.8 6263.700000000001 7285.900000000001 True False 6020.463688437942 6615.694818216113 7622.320817679588 6921.982354595454 7838.928621715998 5691.07325916153 7329.9178300369 6672.993142599734 6473.79316688253 5868.208913030273 6389.780489125449 0.9422019580616213 1.0353555696436114 1.192892436704478 1.0832895380953604 1.2267915361187767 0.8906523892091401 1.147131398725111 1.0443227516119333 1.0131479755681843 0.9183741011161775 1.0 12.641550655163039 -8.622533106760798 3.710799499838223 1.0061318052320365 1.0773823335844703 0.14088957719982975 0.09696080407232768 0.38491131922932303 10.25584084644061 0.015217674502091043 0.017287636520690878 2.3848819862774227e-09 8.622533106760798 0.07125052835243384 ELPPPSEEIKTGEDEDEEDNDALLKENES(ph)PDVRR ddPTM_A549_MK2206_60min_R1 4 ELPPPSEEIKTGEDEDEEDNDALLKENESPDVRR 34 3 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVRR;ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVRR;ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVRR;ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVRR 354.78 4.880099999999997e-288 224348000.0 9314.63 9723.83 9521.84 9402.28 12280.0 10146.8 8905.08 8234.03 13463.4 14668.900000000001 15645.7 True False 10886.711823160871 10218.731413164005 10872.18009083503 11705.839022084387 10473.628267217637 11220.527641099281 10523.017766777419 9401.2289681593 10413.961396631912 11355.185302006501 11760.44089064712 0.9257060959184693 0.868907170078189 0.9244704507193682 0.9953571580291555 0.8905812600569368 0.9540907305628973 0.8947808899873981 0.7993942621348438 0.8855077367817018 0.9655407826620759 1.0 13.521654526358684 -10.732441483041388 1.083133810354198 0.9978868689739705 0.9039846787294107 0.2754067991305784 0.04814772334097414 0.44770729204937587 0.9645018421023871 0.030169833409005937 0.008521417357704179 1.8516483690111257e-11 10.732441483041388 -0.09390219024455981 ELPPPSEEIKTGEDEDEEDNDALLKENES(ph)PDVRR ddPTM_A549_PD325901_60min_R1 4 ELPPPSEEIKTGEDEDEEDNDALLKENESPDVRR 34 3 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVRR;ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVRR;ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVRR;ELPPPSEEIKTGEDEDEEDNDALLKENES(1)PDVRR 496.3 0.0 448131000.0 16061.7 16091.099999999999 15308.3 15512.300000000001 19333.300000000003 17861.5 18298.3 18775.8 18484.8 18974.9 20001.7 True False 17692.271960001402 17447.153468720357 16347.21329428606 16470.45954001059 17975.395704264207 17716.04186596145 18994.65181971397 18401.301939669847 17707.948138623546 17776.821575723312 17541.61770122298 1.0085883902696113 0.9946148505735571 0.9319102475449773 0.9389361814026018 1.0247285062546418 1.009943448073567 1.0828335301361451 1.049008264408073 1.0094820466523433 1.0134083343113751 1.0 14.098494179892759 -6.776657483729835 24.996872595722103 1.0156154514017923 0.9677624331994058 0.42550830708898957 0.03095311473480751 221.513853139387 363852.99583063973 0.00496783826199677 0.009412791338740177 1.6724090779710323e-07 6.776657483729835 -0.04785301820238652 ELPPS(ph)PEK ddPTM_A549_MK2206_60min_R1 4 ELPPSPEK 8 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816-3;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ELPPS(1)PEK;ELPPS(1)PEK;ELPPS(1)PEK;ELPPS(1)PEK 96.89 0.0024735 4496700.0 2995.0 3119.0 2955.1 2775.8 3775.3 3603.0 2830.6 3463.1 5032.8 4045.1 4305.2 True False 3500.4827792802093 3277.743777673871 3374.1776155056773 3455.8711246103985 3219.9583711096693 3984.267068522166 3344.8833801201285 3954.0050302989507 3892.8788357301337 3131.3091005560373 3236.1000225246557 1.0816979558466473 1.0128685006209193 1.0426679002564636 1.0679123329180311 0.9950120047889022 1.2311940424554075 1.0336155733253898 1.2218426509617644 1.2029538050845194 0.9676181449154141 1.0 11.660040484447965 ELPPS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 ELPPSPEK 8 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816-3;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ELPPS(1)PEK;ELPPS(1)PEK 84.17 0.0032138000000000006 6518700.0 3043.4 3426.4 2873.3 3232.4 4036.4 3553.0 3389.8 3715.1 3658.7 3951.7 3795.8 True False 3352.363727567334 3715.154752951847 3068.299416556517 3432.058006686968 3752.897188824053 3524.0655459933964 3518.800693969735 3640.99941606043 3504.9375624719746 3702.1889875986576 3328.9406635587065 1.0070361915023105 1.1160171142793125 0.9217044479478469 1.0309760231706944 1.1273547858351216 1.0586147072462677 1.0570331674845967 1.093741157935848 1.052868740149043 1.112122252020239 1.0 11.70084744016504 -4.893797868650359 14.09621543553602 1.0390976041607698 0.00025373460661727565 0.0 0.05900110967118168 1003663.7210713899 1646393.8339342878 0.007488296177068867 32392521.104533557 1.2770330331474517e-05 4.893797868650359 -1.0388438695541524 ELPPS(ph)PEKK ddPTM_A549_MK2206_60min_R1 5 ELPPSPEKK 9 1 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816-3;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK 104.52 1.7498e-05 592378000.0 154625.8 169013.7 151358.8 146953.4 207189.0 164359.1 148306.1 166227.0 211023.0 219515.0 217265.0 True False 180722.85480214536 177615.7754141195 172823.75380521847 182956.98959698898 176711.77256160838 181751.4708692589 175251.3986647472 189790.1862988374 163226.62743448574 169926.4090402115 163312.10429104802 1.1066102882372308 1.0875848804053132 1.058242158812792 1.1202904425928568 1.0820494496028294 1.1129087562630937 1.073107222673596 1.1621317790419334 0.9994766042790684 1.0405010074291599 1.0 17.317272198303368 -8.788395358974508 24.887125215429784 0.9997528113221562 1.0980985896761966 0.6358480403355892 0.028803867303397665 64.40575446765584 59462.36376940147 0.004105314939137562 0.004371020749839895 1.6278134816954028e-09 8.788395358974508 0.09834577835404035 ELPPS(ph)PEKK ddPTM_A549_PD325901_60min_R1 7 ELPPSPEKK 9 1 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816-3;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK 100.72 3.4384e-05 973639100.0 175706.69999999998 179803.69999999998 168188.1 172522.2 216714.6 169705.60000000003 176817.6 183237.69999999998 187149.40000000002 184231.9 203874.8 True False 193544.3148355639 194956.38882013978 179602.3558632055 183178.50446765582 201493.31412078298 168323.5738593123 183546.49052630324 179582.88032630517 179284.1615475697 172599.46639278714 178799.49206883885 1.0824656859821964 1.0903632139238988 1.0044903024336196 1.024491190372795 1.126923302685932 0.9414096869721909 1.02654928379571 1.004381378539737 1.0027106871117075 0.9653241426789699 1.0 17.447983112575447 -7.265401426299939 24.999982541356943 0.9999321693673537 1.0614192098077715 0.4903099725113468 0.03757981420355886 247.92974141901277 1564400.4041473512 0.005093344433653063 0.008332102376352027 5.427484273115e-08 7.265401426299939 0.06148704044041775 ELPRPVLEGQQSERT(ph)PNNRPDAPK ddPTM_A549_MK2206_60min_R1 1 ELPRPVLEGQQSERTPNNRPDAPK 24 3 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;Q5TAP6 Q9BVJ6-3 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C 1 ELPRPVLEGQQS(0.267)ERT(0.733)PNNRPDAPK 86.54299999999999 2.4814e-07 22972000.0 2595.7 3291.7 3133.5 2522.0 4561.8 3096.5 2800.8 3186.0 5010.5 3824.0 4528.0 True False 3033.7907012279284 3459.2334700125307 3577.8774180863725 3139.8901132168817 3890.76526297992 3424.169574709652 3309.6691058575757 3637.6252567157885 3875.6297501243507 2960.1557441166565 3403.572633557474 0.8913547697840539 1.0163536502515824 1.0512123005133909 0.9225277234454119 1.1431415403388125 1.0060515650376027 0.9724103059314622 1.0687667484603314 1.1386945916513245 0.8697201625524441 1.0 11.732834182392628 -3.5967703501158126 0.5721710311359258 1.0584149658814788 2.646584683318993e-14 0.027017428972428648 0.08533962369212952 20.10926920930223 0.9994597642764897 0.01238333651882338 21.61513017765218 0.00025306358135665654 3.5967703501158126 -1.0584149658814523 ELPRPVLEGQQSERT(ph)PNNRPDAPK ddPTM_A549_PD325901_60min_R1 1 ELPRPVLEGQQSERTPNNRPDAPK 24 3 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;Q5TAP6 Q9BVJ6-3 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C 1 ELPRPVLEGQQS(0.02)ERT(0.98)PNNRPDAPK 133.36 2.5800000000000002e-23 39194000.0 3436.8 4532.1 3966.0 4142.2 4385.1 4379.3 4151.1 4710.8 4275.1 3993.8 4780.1 True False 3785.7014059615626 4914.0359724063355 4235.156609495409 4398.054286381252 4077.1057037737446 4343.636432752287 4309.07238206908 4616.839398448889 4095.432414060719 3741.6307864138266 4192.178003550498 0.9030392800008309 1.1721916312342824 1.0102520947127032 1.0491096233643682 0.9725507123792705 1.0361288163511935 1.0278839253532603 1.101298512262297 0.9769223564915799 0.8925266969210067 1.0 12.033484260933301 ELPSAVS(ph)RDKLIQDSR ddPTM_A549_PD325901_60min_R1 1 ELPSAVSRDKLIQDSR 16 2 O00429-3 O00429-3 DNM1L Dynamin-1-like protein 1 ELPS(0.009)AVS(0.99)RDKLIQDS(0.001)R 63.578 0.0006827999999999999 4150600.0 672.65 789.31 885.56 756.31 1007.1 1309.2 783.33 1158.7 1186.4 975.55 1328.3 True False 740.9369328212421 855.8279237836862 945.6594269048796 803.0255509953657 936.3647703063872 1298.5383092638765 813.1400518046231 1135.5888195174352 1136.5397338171356 913.953606511595 1164.9275207874573 0.6360369375773611 0.7346619497882334 0.8117753336839714 0.6893352046937167 0.8037965912878697 1.1146945076772692 0.6980177198105544 0.9748149985758857 0.9756312848106358 0.7845583439335254 1.0 10.186024481040914 -6.150152527710367 0.32658027086605856 1.0070610933388695 0.523164499320405 0.2971608183961234 0.12340416888838507 2.194518238824826 0.2470103390439656 0.037625480617861216 0.3877443308099519 7.076971917947406e-07 6.150152527710367 -0.4838965940184645 ELPSFLGK ddPTM_A549_MK2206_60min_R1 2 ELPSFLGK 8 0 P26447 P26447 S100A4 Protein S100-A4 0 ; 119.29 0.0033939 12818100.0 4202.7 4486.9 4249.7 4055.3 5945.299999999999 4359.8 4550.9 4326.3 5812.0 5685.4 5663.8 False True 4912.013013850066 4715.264044900578 4852.371362259985 5048.848682049337 5070.754245691284 4821.151142198982 5377.739622196244 4939.566273738082 4495.591279856848 4401.064191318213 4257.32214707218 1.1537799687599695 1.1075657143172335 1.1397707748277939 1.1859212217523876 1.1910666072518175 1.1324374749311734 1.2631742293438122 1.1602519384479961 1.0559669023281522 1.0337634877700965 1.0 12.055730546122811 -8.8616113872462 2.863677620168332 1.0228003308435518 1.1679800105501308 0.7141247970394742 0.03893006105560971 0.10087522189474207 1.5898390758734673 0.007686246792937029 0.008093360118741866 1.3752720371737548e-09 8.8616113872462 0.14517967970657897 ELPSFLGK ddPTM_A549_PD325901_60min_R1 2 ELPSFLGK 8 0 P26447 P26447 S100A4 Protein S100-A4 0 ; 144.38 0.0025426 21882000.0 8999.5 8935.900000000001 8015.700000000001 8830.0 9971.1 9042.9 9569.099999999999 9362.099999999999 9992.8 10451.400000000001 10400.400000000001 False True 9913.122614918258 9688.959653543785 8559.693604319806 9375.409045615 9270.764334427586 8969.257620563943 9933.257336912435 9175.36557107463 9572.83736689807 9791.496820352922 9121.216733567619 1.0868202022254654 1.0622442089208095 0.9384376947012658 1.0278682460325619 1.0163955758566297 0.9833400392247627 1.0890276623245196 1.0059365805120861 1.0495132005435646 1.073485819530914 1.0 13.15501057159584 -11.112515398715974 1.4728850422800708 1.0000661501008148 1.0296092451651297 0.0 0.0473357580633679 1.025393531501244 3.9939574901431203 0.029318269018433592 0.006421494645988765 7.71764150771177e-12 11.112515398715974 0.02954309506431496 ELPSLS(ph)PAPDTGLSPSKR ddPTM_A549_MK2206_60min_R1 1 ELPSLSPAPDTGLSPSKR 18 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 ELPS(0.409)LS(0.59)PAPDTGLSPSKR 44.5 0.020409 6008100.0 1613.3 2388.7 2218.2 2795.6 3612.0 2075.0 1917.7 2027.0 3929.3 3324.9 3647.5 True False 1885.5855986019237 2510.2746270373764 2532.7741148234213 3480.5221254992543 3080.679584787466 2294.5751227264745 2266.12126688913 2314.333457427151 3039.319823802736 2573.8027807566637 2741.72508412122 0.6877369323140191 0.9155821791089502 0.9237885043588272 1.2694643039365248 1.1236281867315256 0.836909264176621 0.8265311792248744 0.8441157980538166 1.108542881051439 0.9387530484594961 1.0 11.420868202365998 -5.326157800328678 1.8165191335411062 1.0225807593920468 0.6113134565593187 0.26474112361936775 0.13429246514814 0.6815097479622256 2.494519878895553 0.01998635821330725 0.4554299450320977 4.718915489361964e-06 5.326157800328678 -0.41126730283272817 ELPSLSPAPDTGLS(ph)PSKR ddPTM_A549_MK2206_60min_R1 2 ELPSLSPAPDTGLSPSKR 18 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 ELPSLSPAPDT(0.054)GLS(0.913)PS(0.033)KR;ELPSLSPAPDT(0.009)GLS(0.971)PS(0.02)KR 155.87 6.2324e-23 61342000.0 3356.5 3658.3 3684.4 3078.5 4445.9 3238.7 3034.2 3132.3 5273.8 4867.6 5582.9 True False 3922.9951414537645 3844.4918441373275 4206.903321907593 3832.732638199117 3791.9139994481156 3581.4170843249317 3585.4748646790417 3576.3131172664366 4079.292720528051 3768.005779304982 4196.511849798593 0.9348228437963411 0.9161160463116146 1.0024762165533974 0.9133139081647212 0.9035871064274736 0.8534271348469605 0.8543940760827644 0.8522108944927863 0.9720674852196193 0.897889941496489 1.0 12.034974939252724 -8.91461046411592 6.910419874119853 0.9878115259625058 0.9045361588879521 0.11267802561839024 0.049395504814121236 0.15891460936596927 10.69540302018301 0.00797592517757905 0.00844902124668607 1.2172773352912788e-09 8.91461046411592 -0.08327536707455363 ELPSLSPAPDTGLS(ph)PSKR ddPTM_A549_PD325901_60min_R1 2 ELPSLSPAPDTGLSPSKR 18 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 ELPSLSPAPDT(0.003)GLS(0.997)PSKR;ELPSLSPAPDT(0.002)GLS(0.997)PS(0.002)KR 233.34 2.8865999999999994e-65 105280000.0 10314.1 10415.3 11282.5 10706.599999999999 13730.5 13016.2 11802.1 12547.599999999999 11321.3 10741.3 11496.8 True False 11361.179839160895 11293.033883498536 12048.198297184037 11367.922365547172 12766.117047653515 12910.20038270735 12251.235373856925 12297.328274598227 10845.505131881258 10063.092484878267 10082.766484219863 1.1267919233220194 1.1200332667797885 1.1949298157445374 1.1274606412177308 1.2661323722644235 1.280422431969697 1.2150668562076536 1.2196383099662464 1.0756477548949614 0.9980487498770911 1.0 13.29960391575512 -8.958714004284632 2.3987280191632996 1.0287818386064183 1.1953690490272706 0.6658505341640466 0.05360678189096343 0.13301165617512664 1.517255513421588 0.011200820365748407 0.011393072149648997 1.0997298055167804e-09 8.958714004284632 0.16658721042085234 ELPTVTTNVQNS(ph)QDKSIEK ddPTM_A549_MK2206_60min_R1 2 ELPTVTTNVQNSQDKSIEK 19 1 Q96B01-2;Q96B01;H0YGT5;Q96B01-3;F5H1Y0 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 ELPTVTTNVQNS(0.998)QDKS(0.002)IEK;ELPTVTTNVQNS(0.999)QDKSIEK 125.62 2.3628e-15 12750200.0 3941.8 5726.200000000001 4471.799999999999 4534.2 6305.700000000001 4548.3 4056.8 4555.7 7947.8 7162.1 8477.6 True False 4607.079472242647 6017.639121422294 5105.9684819526565 5645.07920354797 5378.139883110278 5029.598087082809 4793.868047930242 5201.484426246118 6147.635990028604 5544.176635705519 6372.377950142853 0.7229764945344097 0.944331797094269 0.8012657946376507 0.8858669789699811 0.84397691492698 0.7892811955653161 0.7522887194446424 0.8162548528888677 0.964731853340681 0.8700326124851451 1.0 12.637616121303465 -8.802312187479684 4.835448242698574 0.9844865495687497 0.8225814377174521 0.37679732088918916 0.06690767304900624 0.08976077970643748 4.682766324594768 0.009708390451933115 0.010415760565602976 1.5764776298962959e-09 8.802312187479684 -0.16190511185129763 ELPTVTTNVQNS(ph)QDKSIEK ddPTM_A549_PD325901_60min_R1 2 ELPTVTTNVQNSQDKSIEK 19 1 Q96B01-2;Q96B01;H0YGT5;Q96B01-3;F5H1Y0 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 ELPTVTTNVQNS(0.999)QDKS(0.001)IEK;ELPTVTTNVQNS(1)QDKSIEK 151.01 1.0427e-21 23539000.0 5799.0 6960.700000000001 6225.3 7207.9 7066.3 7745.5 6475.799999999999 7637.2 7855.4 6590.9 6471.7 True False 6387.710211001829 7547.302617578776 6647.786293769984 7653.1156126713895 6569.987465411606 7682.423216012344 6722.240112693733 7484.870054732507 7525.264855889349 6174.749449189966 5675.721927486404 1.1254445324510007 1.3297520058247878 1.1712670879057805 1.3483950958923583 1.157559786992814 1.3535587744015225 1.1843850348163196 1.3187520724869828 1.3258691937400902 1.0879231801838054 1.0 12.470588193358713 -10.818825742584481 1.0177069333542756 0.9969840448726888 1.2627346141663727 0.47860421331420555 0.08421629514254177 0.2761178386279853 0.49833850139479824 0.05361215682980444 0.012690864204005324 1.5176591947183687e-11 10.818825742584481 0.2657505692936839 ELPVPGS(ph)AEEEPPSGGGR ddPTM_A549_MK2206_60min_R1 2 ELPVPGSAEEEPPSGGGR 18 0 P16383-3;P16383-4;P16383;C9JII4;P16383-2 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 ELPVPGS(1)AEEEPPSGGGR;ELPVPGS(1)AEEEPPSGGGR 105.53 5.219600000000001e-09 7275000.0 1994.0900000000001 2933.8999999999996 2238.53 2033.5299999999997 2768.4 2492.3 2291.0 2161.87 3577.7 3380.7 3378.7 True False 2330.6436411802597 3083.222978299896 2555.987214523343 2531.7449412886313 2361.1720272773055 2756.033531745155 2707.245044815663 2468.321692949204 2767.35666241291 2616.9975220018805 2539.6755426238165 0.9176934620445257 1.2140223924488103 1.0064227385056732 0.9968773171209926 0.929714047188054 1.0851911929260902 1.065980673270856 0.9719043442845087 1.089649687910082 1.0304456132605744 1.0 11.310428481286676 -11.299468582148327 1.8654952398641789 0.9998351588164279 1.042558458482408 0.0 0.08063099625346723 1.1372281734203311 7.14225542885752 0.05775795266799477 0.011362730054193072 5.018008791418325e-12 11.299468582148327 0.042723299665979986 ELPVS(ph)PGHR ddPTM_A549_MK2206_60min_R1 2 ELPVSPGHR 9 0 Q16236-3;Q16236-2;Q16236;C9JBM0 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 ELPVS(1)PGHR;ELPVS(1)PGHR 78.342 0.0005658 10491000.0 520.36 470.39 584.14 406.83 681.8 604.89 483.73 455.35 738.45 709.81 740.5 True False 608.1840464194489 494.3308418018635 666.9798356473514 506.50336826329254 581.5081231749986 668.8990583065149 571.6174794974602 519.8972569508902 571.1922540623343 549.4634280155454 556.6134132396883 1.0926507194276927 0.8881044366586174 1.198282002881122 0.9099733427465619 1.0447253144519357 1.2017300381126 1.0269559911796644 0.9340365226287003 1.0261920400692321 0.9871544863022123 1.0 9.120531864849593 -7.996449675500854 24.998430406126097 1.0055847289368365 1.0531736814591812 0.0922309461366918 0.09459198995750823 265.60716328713227 1870170.0353201153 0.013783010661204983 0.018991044697557802 1.0082084302010027e-08 7.996449675500854 0.04758895252234474 ELPVS(ph)PGHR ddPTM_A549_PD325901_60min_R1 1 ELPVSPGHR 9 0 Q16236-3;Q16236-2;Q16236;C9JBM0 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 ELPVS(1)PGHR 71.555 0.0010696 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ELPVS(ph)PGHRK ddPTM_A549_MK2206_60min_R1 2 ELPVSPGHRK 10 1 Q16236-3;Q16236-2;Q16236;C9JBM0 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 ELPVS(1)PGHRK;ELPVS(1)PGHRK 46.592 0.014577000000000001 10057700.0 4060.8 4394.7 3788.5 3751.1000000000004 5973.7 3589.3 3852.2 4344.4 5914.9 6058.0 7074.6 True False 4746.163762971982 4618.371458718614 4325.766267247562 4670.11966839328 5094.9766433125415 3969.117343615489 4552.094876315537 4960.2320041670055 4575.184594154379 4689.493592536274 5317.781570972989 0.892508219758184 0.8684770890041644 0.8134531683023002 0.8782082539615844 0.9581019030799188 0.7463859300428662 0.8560138876638071 0.9327633972862553 0.8603558707879123 0.8818514882472396 1.0 12.376608804064153 -10.838685974322537 0.5530737574663184 1.0289932643595485 0.8625412972423335 0.053738879783546634 0.06346103908310827 0.9942797097515507 0.3918719886343539 0.087591803537249 0.011580698871041536 1.4498197970543362e-11 10.838685974322537 -0.166451967117215 ELPVS(ph)PGHRK ddPTM_A549_PD325901_60min_R1 1 ELPVSPGHRK 10 1 Q16236-3;Q16236-2;Q16236;C9JBM0 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 ELPVS(1)PGHRK 54.7 0.004111500000000001 4148200.0 383.28 440.9 369.09 443.16 267.48 379.07 398.09 421.01 443.48 487.21 465.62 True False 422.1903034441768 478.05619033868436 394.1386669184719 470.5329867106161 248.6931275559056 375.9829796002578 413.2395327932064 412.6126252740445 424.84207784324275 456.4474774522212 408.35169180836834 1.0338889538439886 1.1706972198930596 0.9651941569607447 1.1522738760475817 0.6090170128953758 0.9207332481842623 1.0119696846686064 1.0104344699707422 1.0403828032690337 1.11778030214804 1.0 8.673668394602696 -5.775539408412893 24.974109226242803 0.9906697641296535 1.1022931049417637 0.10136399724010459 0.13692498457017288 356.3564422327047 631185.4100843902 0.017769739918678168 0.055643073285020585 1.6767201812036934e-06 5.775539408412893 0.11162334081211023 ELQAAGKS(ph)PEDLER ddPTM_A549_PD325901_60min_R1 2 ELQAAGKSPEDLER 14 1 P06744-2;P06744;A0A2U3TZU2 P06744-2 GPI Glucose-6-phosphate isomerase 1 ELQAAGKS(1)PEDLER;ELQAAGKS(1)PEDLER 83.251 9.0244e-05 37006000.0 10458.3 11291.0 10735.6 10153.6 12901.8 11429.8 11495.5 11124.0 11904.5 11675.0 13592.300000000001 True False 11520.018917006451 12242.532195767943 11464.18237440719 10780.764811501294 11995.622076793712 11336.719498338107 11932.967543078963 10902.123093390817 11404.195264013888 10937.838507532035 11920.533268688816 0.9664013058262771 1.0270121243589754 0.9617172416706974 0.9043861183474647 1.006299114847666 0.9510245257329059 1.0010430971593198 0.9145667268113739 0.9566849910958957 0.9175628523483941 1.0 13.541161156195509 -10.79243608756763 1.1322447895894228 0.999307090340845 0.9653346794440145 0.0 0.04244387170035898 0.8253182158602103 1.9367969175135713 0.020978972991324472 0.005720427791175849 1.612738346601031e-11 10.79243608756763 -0.03397241089683045 ELQEAAAVPT(ph)TPRR ddPTM_A549_MK2206_60min_R1 1 ELQEAAAVPTTPRR 14 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ELQEAAAVPT(0.527)T(0.473)PRR 60.528 0.004303 10629000.0 858.64 776.98 740.32 870.28 972.1 778.6 770.21 709.43 947.72 907.51 1113.1 True False 1003.5574402674987 816.5249632500946 845.3085081084104 1083.498639068354 829.1053777330832 860.9909352071488 910.1471872402759 809.9938750382557 733.0629331978545 702.502860706932 836.6865500028323 1.19944253946009 0.9759030586153568 1.0103048843148594 1.294987518401827 0.9909390532574912 1.0290483756482451 1.087799471901628 0.9680971625939413 0.8761500148357506 0.8396248997961708 1.0 9.708543433275901 -8.32910790007677 4.317713372148406 0.9407833792446978 1.079701839033135 0.38803888510455864 0.09766473763209423 0.2049546444277022 7.55891141802227 0.015707872948396418 0.019225492145526834 4.686969203465255e-09 8.32910790007677 0.1389184597884372 ELQEAAAVPTT(ph)PRR ddPTM_A549_MK2206_60min_R1 1 ELQEAAAVPTTPRR 14 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ELQEAAAVPT(0.125)T(0.875)PRR 86.479 6.3962e-05 13200000.0 805.08 1016.0 1026.7 868.02 822.58 646.52 711.19 881.03 978.1 1106.9 1194.1 True False 940.957821683777 1067.7100603131303 1172.3014983721966 1080.6849389668982 701.5795716651368 714.9343172747568 840.4040172075296 1005.9187005412159 756.5619117047459 856.8505212245628 897.5720145165587 1.0483368537181792 1.1895536436574503 1.3060807148756859 1.2040091730678188 0.7816415399749451 0.7965202855169539 0.9363081776342811 1.1207108558114012 0.8428982850052847 0.954631502950848 1.0 9.809883884496395 -6.743214110506321 24.99306694971704 0.9217548306189406 1.1956840811692755 0.5983097427617867 0.10554525844786057 136.89875252530263 187733.9225983919 0.016112862409763548 0.03349097968910288 1.8062833949103255e-07 6.743214110506321 0.2739292505503349 ELQEAAAVPTT(ph)PRR ddPTM_A549_PD325901_60min_R1 2 ELQEAAAVPTTPRR 14 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ELQEAAAVPT(0.192)T(0.808)PRR;ELQEAAAVPT(0.254)T(0.746)PRR 77.08 0.00045955 34880000.0 4104.0 4345.2 4270.1 4352.9 4881.1 4186.6 3658.8999999999996 4563.9 4492.4 5015.1 5464.5 True False 4520.635058794879 4711.385253480724 4559.894664197263 4621.768746846832 4538.268374880855 4152.505717662805 3798.1414417269034 4472.869434189713 4303.600050741822 4698.445730117682 4792.401142319552 0.943292292223865 0.9830949274835504 0.9514843454841191 0.9643952185125029 0.9469717246341163 0.8664770736727115 0.7925341241131121 0.9333253417982487 0.898004971399129 0.9803949190788326 1.0 12.226532956940213 -2.4898215206994987 13.92851338039483 0.9374573144801381 1.2261732324811379 0.0 0.057603253241236226 0.0 0.0 0.008452662584188976 0.0 0.0032372666953081834 2.4898215206994987 0.2887159180009997 ELQELVQYPVEHPDK ddPTM_A549_MK2206_60min_R1 1 ELQELVQYPVEHPDK 15 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 83.10600000000001 0.00026425 2781900.0 1074.1 1397.2 1164.4 898.2 1519.8 1185.5 1253.8 1413.2 1793.9 1516.9 2011.0 False True 1255.3818207762513 1468.3115120762852 1329.5294289515791 1118.2590403217303 1296.2394332668866 1310.9488231287894 1481.5992305499253 1613.5254277434894 1387.5845142696483 1174.2312364671966 1511.613199223516 0.8304914388291361 0.9713539897842425 0.8795434107313501 0.7397785629922764 0.857520583925 0.8672515057437951 0.9801444121492138 1.0674195148417094 0.9179494562381576 0.7768066837934299 1.0 10.561873305866097 -7.738606171348422 7.054673283544093 0.9712471496337491 0.8580992164572641 0.20147193910658023 0.08470097474986991 0.13176202290318584 25.151757027996226 0.010156787165748284 0.014875590457442706 1.8255504048323136e-08 7.738606171348422 -0.11314793317648508 ELQELVQYPVEHPDK ddPTM_A549_PD325901_60min_R1 2 ELQELVQYPVEHPDK 15 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 100.41 8.1446e-06 8565700.0 2726.0 2706.0 2601.2 2850.6 3560.8 3039.4 3789.5 3474.5 3773.6 3955.0 4261.7 False True 3002.741513224867 2934.0441167078243 2777.7330742862973 3026.6750878176776 3310.7016920931237 3014.6481341098593 3933.711496193965 3405.198371807478 3615.008715047487 3705.280625035475 3737.5379171421405 0.8034009499817661 0.785020562132866 0.7431986339312524 0.8098045170153043 0.8857974863368365 0.8065866356253505 1.0524873816402178 0.9110806224037503 0.9672165995874782 0.9913693739510393 1.0 11.86787250011877 -7.379840107936538 0.965252572221705 0.9843630757138423 0.7772750944262317 0.7350294914557235 0.05113650713961806 0.17957895724577191 0.3322181081120338 0.008259192219717782 0.017821721305889094 4.1702288847686523e-08 7.379840107936538 -0.20708798128761063 ELQELVQYPVEHPDKFLK ddPTM_A549_MK2206_60min_R1 2 ELQELVQYPVEHPDKFLK 18 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 79.97 0.0010589 3112700.0 1395.81 1506.95 1812.15 1373.67 2156.92 1500.1599999999999 1119.83 1336.0500000000002 2436.1 1969.8400000000001 2462.4 False True 1631.3886037219058 1583.6473182961336 2069.140119095332 1710.2192116663896 1839.6399252546473 1658.9059354743852 1323.2886156856928 1525.439178981524 1884.327239652316 1524.8517758867047 1850.9181212172975 0.8813942578124346 0.8556009583258133 1.1178993254085794 0.9239842606012338 0.9939067018506292 0.8962611130433845 0.7149363337668349 0.8241527064299771 1.0180500250400304 0.8238353487424133 1.0 10.854025361001593 -8.790342244675262 24.72207810062828 1.0085236532044306 0.904233174482318 0.0 0.11018756731601134 229.26994712313532 196105.04564179346 0.017382919606557398 0.018507138311054553 1.6205325374416988e-09 8.790342244675262 -0.10429047872211261 ELQGDGPPS(ph)SPTNDPTVK ddPTM_A549_MK2206_60min_R1 1 ELQGDGPPSSPTNDPTVK 18 0 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.499)S(0.499)PT(0.002)NDPTVK 237.59 2.3947999999999996e-74 30550000.0 2922.0 3093.4 3208.0 3467.2 3977.3 3199.6 3181.4 2994.8 4631.6 4397.3 4022.0 True False 3415.162163958855 3250.840847020312 3662.9426383344767 4316.66415564852 3392.24443869745 3538.179548277411 3759.4191992913793 3419.3220711903473 3582.549995145383 3403.9468759425167 3023.226398447032 1.1296415530484758 1.0752885886052732 1.2116005073970157 1.4278335747087616 1.1220610009359453 1.170332314541478 1.2435122957455367 1.1310175357514678 1.1850088359196864 1.1259318447639426 1.0 11.561873305866097 -10.649858106869328 0.5510574328319043 0.9697830644802259 1.1962650358718963 0.16185831715499732 0.09517748645453561 1.0526791100463586 0.45822568356731 0.12215405978814008 0.020536702602639807 2.2394526952951772e-11 10.649858106869328 0.22648197139167037 ELQGDGPPS(ph)SPTNDPTVK ddPTM_A549_PD325901_60min_R1 1 ELQGDGPPSSPTNDPTVK 18 0 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.495)S(0.495)PT(0.01)NDPTVK 288.82 5.339799999999999e-133 48011000.0 7251.9 6047.9 7210.9 7094.9 9622.8 7049.8 7378.8 7861.6 8587.3 7795.1 8787.4 True False 7988.107549433386 6557.577758106891 7700.275036664255 7533.135859313009 8946.927724857818 6992.388766153742 7659.6042718342915 7704.794220694112 8226.405644140154 7302.91605567991 7706.605507918169 1.0365273713862722 0.8509035205408262 0.9991785655503698 0.9774907839220617 1.1609427413489997 0.907324081785346 0.9939011752923403 0.999764969515801 1.0674486498222746 0.9476177349647017 1.0 12.911879827647862 -6.161199827266322 2.830403541167891 1.0253034943009731 0.9431637871017344 0.04210276552338765 0.07556864336077207 0.3408578377699246 5.250353702746472 0.009541744052658471 0.029321575318420338 6.899222842495372e-07 6.161199827266322 -0.08213970719923869 ELQGDGPPSS(ph)PTNDPTVK ddPTM_A549_MK2206_60min_R1 1 ELQGDGPPSSPTNDPTVK 18 0 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.1)S(0.587)PT(0.312)NDPT(0.001)VK 145.69 8.388999999999999e-17 34821000.0 1778.7 2840.3 1936.4 1607.8 2641.8 2186.1 2170.3 1992.6 3146.3 2863.1 2440.1 True False 2078.9010749601703 2984.85913809782 2211.0106374285783 2001.7110721768854 2253.1947195712974 2417.4316509842633 2564.615417181769 2275.057152081571 2433.6680736086714 2216.323721490692 1834.1558266659888 1.1334375437113562 1.6273748907820478 1.2054649911875874 1.0913527864289851 1.2284641723527987 1.3180077809302146 1.3982538342140551 1.2403837880105446 1.3268600400394757 1.2083617374644682 1.0 10.84090049764535 -10.740891822682926 0.8271762406015261 0.9857359053822413 1.2911616095337648 0.12642463594043762 0.1492205310715343 0.585179833373976 0.6569069791096132 0.11624389099302171 0.024862156691958622 1.8159679413164144e-11 10.740891822682926 0.3054257041515235 ELQGDGPPSS(ph)PTNDPTVK ddPTM_A549_PD325901_60min_R1 1 ELQGDGPPSSPTNDPTVK 18 0 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.018)S(0.965)PT(0.018)NDPTVK 226.65 4.206699999999999e-64 54298000.0 4764.1 4770.5 5354.4 4716.2 6043.2 5162.1 5451.2 4970.5 5543.8 5237.6 5725.8 True False 5247.747924854943 5172.526777071208 5717.781782622848 5007.508962732666 5618.746479908214 5120.0615690888035 5658.6483990111 4871.359478218184 5310.813365083814 4906.897042145591 5021.562898836728 1.045042754730925 1.030063126017888 1.1386458554462004 0.9972012824717743 1.1189238476351309 1.019615142185094 1.1268699631985006 0.9700883124149776 1.0576016814036306 0.9771653051049703 1.0 12.293920739570739 -11.700548580270159 0.2796517857718085 0.9471290111046016 1.0651353174374756 0.21193496507921128 0.05111481671662542 9.971866273234905 0.6280213425752915 0.399633736705144 0.023312339010480118 1.992743584989262e-12 11.700548580270159 0.11800630633287401 ELQQAELPNRS(ph)PGFGIK ddPTM_A549_MK2206_60min_R1 1 ELQQAELPNRSPGFGIK 17 1 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 ELQQAELPNRS(1)PGFGIK 180.52 8.0653e-32 24415000.0 6336.6 6766.6 6710.2 5931.4 8459.9 7024.5 7474.7 8137.5 9243.3 9132.4 9168.0 True False 7406.063165004 7110.991037514599 7661.807260521198 7384.593266270662 7215.45991676176 7767.827927514275 8832.756235916037 9291.015545048569 7149.707308517001 7069.384497272739 6891.332576072204 1.0746924608919648 1.031874598855537 1.111803439457298 1.071576967843801 1.0470340586688527 1.12718807890442 1.281719629463939 1.3482175533522274 1.037492709805055 1.0258370814693751 1.0 12.750567268317651 -8.973183114792585 24.999717350200182 1.0165407570309752 1.1356008521430014 0.2392340216587605 0.09242479548959913 198.98042983728743 185498.85120856963 0.017712013471665462 0.018487234621346278 1.0636944303150664e-09 8.973183114792585 0.1190600951120262 ELQQAELPNRS(ph)PGFGIK ddPTM_A549_PD325901_60min_R1 4 ELQQAELPNRSPGFGIK 17 1 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 ELQQAELPNRS(1)PGFGIK;ELQQAELPNRS(1)PGFGIK;ELQQAELPNRS(1)PGFGIK;ELQQAELPNRS(1)PGFGIK 140.45 1.4137e-14 90296000.0 15967.0 14931.1 18302.1 16375.400000000001 20051.3 15502.0 17183.3 17121.3 18288.8 16665.4 19605.100000000002 True False 17587.958085715858 16189.396197699998 19544.19056546794 17386.871266768267 18642.965861229746 15375.756851671715 17837.219884562564 16779.80224009998 17520.185337015195 15613.143799865049 17193.79698696845 1.0229246104886636 0.9415835379451258 1.1367000890077337 1.0112292985630895 1.0842844006684302 0.8942618586997004 1.037421803809931 0.975921854423299 1.018982912866432 0.9080684046518979 1.0 14.069600556673196 ELQQAELPNRS(ph)PGFGIKK ddPTM_A549_MK2206_60min_R1 1 ELQQAELPNRSPGFGIKK 18 2 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 ELQQAELPNRS(1)PGFGIKK 42.041000000000004 0.016524 1642800.0 1260.2 1905.6 1728.2 1702.9 2840.9 1956.7 1235.9 1580.0 2932.3 2722.7 2913.6 True False 1472.8909510680874 2002.5869005243126 1973.2847467486422 2120.1105764460854 2423.007373317474 2163.75669524766 1460.4470322512782 1803.9698385470656 2268.1387319208948 2107.6401790027253 2190.0727087307982 0.6725306174522692 0.9143928840996616 0.9010133494116778 0.9680548814631558 1.1063593293766338 0.9879839544238743 0.666848651384567 0.8237031726643044 1.0356454024922934 0.9623608250998001 1.0 11.096763051650221 -4.6892737813681 1.1239448763531474 0.9786973729161068 4.022629939218441e-12 0.2630536062171456 0.11506419598503809 4.592840850983649 1.9011151557131962 0.018373110462132376 7.271698771474683 2.0451549545580812e-05 4.6892737813681 -0.9786973729120841 ELQQAELPNRS(ph)PGFGIKK ddPTM_A549_PD325901_60min_R1 2 ELQQAELPNRSPGFGIKK 18 2 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 ELQQAELPNRS(1)PGFGIKK;ELQQAELPNRS(1)PGFGIKK 67.251 0.00038202 11512100.0 4274.4 3515.5 3708.3 3944.8 4760.8 5553.1 4465.9 5075.8 4747.5 4956.799999999999 5406.7 True False 4708.33394135303 3811.763522648323 3959.96753781942 4188.46133670918 4426.417831868384 5507.877394724436 4635.852268334246 4974.55918711193 4547.979084875967 4643.826802067217 4741.710175895165 0.9929611399043735 0.8038794825600488 0.8351348755877591 0.8833229323043684 0.9335066184286015 1.161580356117955 0.9776751628349082 1.0491065464946532 0.9591432028039072 0.9793569471357516 1.0 12.211191769376361 -7.003607230714749 13.16408783092663 0.9990295670584375 0.8750873837382225 0.471994127646741 0.06875132850977558 0.2671622525976393 963.9294769446428 0.009845117832129557 0.01808513998116668 9.917284434738891e-08 7.003607230714749 -0.123942183320215 ELQREPLT(ph)PEEVQSVR ddPTM_A549_MK2206_60min_R1 1 ELQREPLTPEEVQSVR 16 1 H3BV90;Q6FI81-3;Q6FI81;H3BT65;H3BUG4 H3BV90 CIAPIN1 Anamorsin 1 ELQREPLT(0.988)PEEVQS(0.012)VR 50.226000000000006 0.0084698 3070000.0 708.75 626.11 700.64 604.13 860.78 775.85 698.35 533.76 1225.2 1085.8 1267.0 True False 828.3696727261603 657.9763246679664 800.001287444722 752.1418771204267 734.1604022683713 857.9499320324509 825.2311554111826 609.4221145714441 947.6941562423626 840.5170258791494 952.3689325789132 0.869799133916542 0.6908838604029606 0.8400119534332184 0.7897589383598506 0.7708781514747057 0.9008587981857138 0.8665036491441871 0.6399012963612686 0.9950914228964906 0.8825540157038924 1.0 9.895376748701555 -8.833070517826236 13.8198297790194 0.9977374468444359 0.7988338971997511 0.42393821051388925 0.08133825559678821 0.4952087678468975 94.75437594963071 0.011905561840097428 0.0126720227427461 1.4686877826064822e-09 8.833070517826236 -0.19890354964468482 ELRAPS(ph)PPVEHPR ddPTM_A549_MK2206_60min_R1 7 ELRAPSPPVEHPR 13 1 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR 136.35 7.5159e-09 167855000.0 12327.970000000001 12228.66 12286.05 10619.75 15114.220000000001 12017.1 10425.69 9995.449999999999 14980.02 18195.890000000003 17214.33 True False 14408.629946071145 12851.046561170042 14028.396633949287 13221.5892267387 12890.93825968617 13288.741545694615 12319.90292068276 11412.335647281805 11587.069388176391 14085.425811405568 12939.536769661529 1.1135352217441123 0.9931612537553149 1.0841498334655022 1.0217977244547487 0.996244184715383 1.0269874248398014 0.9521131351138024 0.8819740498005731 0.895477913501805 1.0885571919723378 1.0 13.65949834988803 -7.353932910083794 1.2682700247106777 0.9438174612355295 1.050422186184846 0.2454522435581563 0.06195703633609061 0.3098375855748417 0.9827518863538237 0.008662308399819045 0.017070671001738407 4.42656748802298e-08 7.353932910083794 0.1066047249493165 ELRAPS(ph)PPVEHPR ddPTM_A549_PD325901_60min_R1 3 ELRAPSPPVEHPR 13 1 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR 139.08 2.6328000000000003e-09 232881000.0 7950.15 9295.68 9086.5 9995.4 11327.4 10234.2 9150.85 10824.810000000001 10169.5 10428.4 11338.0 True False 8757.243375408902 10079.059576791795 9703.164531563294 10612.793156799562 10531.802501408574 10150.8560683382 9499.090604287263 10608.900672650834 9742.111280388863 9769.94904427812 9943.497877503716 0.8807004821936343 1.0136332004047364 0.9758301003428427 1.0673098428280523 1.0591647558185582 1.0208536466129905 0.9553067463088734 1.0669183825796889 0.9797469060087525 0.9825465007019075 1.0 13.2795377302957 -2.414241092714505 14.790367414235533 0.9987295548300757 0.9661359796533207 0.0 0.05281323290626296 0.0 0.0 0.006415371893220937 0.0 0.003852644239498535 2.414241092714505 -0.032593575176755096 ELREDS(ph)IR ddPTM_A549_MK2206_60min_R1 2 ELREDSIR 8 1 C9JK69;P17342-3;P17342-2;P17342 C9JK69 NPR3 Atrial natriuretic peptide receptor 3 1 ELREDS(1)IR;ELREDS(1)IR 80.763 0.001073 9001000.0 539.5799999999999 1182.0 1163.5 628.3199999999999 1425.79 748.75 764.1800000000001 1109.08 1023.99 1075.51 1152.31 True False 630.6479125355644 1242.1587512698027 1328.501795418381 782.2584282063564 1216.0581797325913 827.9822280199749 903.0216142938606 1266.2954864150502 792.0578999760177 832.5515440258646 866.1596248618847 0.7280966399653247 1.4340991147767639 1.533784024659681 0.9031342558031299 1.4039654410426952 0.9559233705357745 1.0425579631905075 1.4619654969682638 0.9144479576756038 0.9611987445831602 1.0 9.758489114005279 ELREDS(ph)IR ddPTM_A549_PD325901_60min_R1 2 ELREDSIR 8 1 C9JK69;P17342-3;P17342-2;P17342 C9JK69 NPR3 Atrial natriuretic peptide receptor 3 1 ELREDS(1)IR;ELREDS(1)IR 80.763 0.001073 16967200.0 774.68 809.6700000000001 1095.58 1065.3899999999999 1109.0 1023.9 840.79 842.0 659.16 963.6500000000001 1230.92 True False 853.3249433107254 877.9037324371127 1169.9326470577348 1131.1967206237557 1031.1076658423028 1015.5616978729628 872.7867235479414 825.2056494637778 631.4577974906466 902.8049745424622 1079.5246434447765 0.790463606822124 0.8132317661926743 1.0837479757057378 1.047865583701816 0.9551497245602708 0.9407489713549223 0.8084917086865827 0.7644157588015188 0.5849406044827814 0.8362986246072164 1.0 10.076180462315941 -7.773379469174754 5.115018284900856 0.7952341044989659 0.9458272795453639 0.2488676171859766 0.12062282307396133 0.27244885910184075 19.67431794508679 0.026448491855093476 0.03789041104376441 1.6850800263251767e-08 7.773379469174754 0.15059317504639802 ELRGT(ph)QR ddPTM_A549_MK2206_60min_R1 2 ELRGTQR 7 1 C9J0A7;Q9UQN3;A0A087WW88 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 ELRGT(1)QR;ELRGT(1)QR 61.78 0.010999 27530000.0 1648.88 5136.4 2619.2 1260.4 3234.8 2507.1 1183.21 2482.2 2338.45 3300.3999999999996 3925.0 True False 1927.1706327544416 5397.820820661775 2990.6419446152318 1569.1980565815065 2758.96520511365 2772.3996579217087 1398.1839412816853 2834.0594514186855 1808.79480873731 2554.8373477726514 2950.31417551084 0.6532086137642465 1.8295749196700906 1.013668974456732 0.5318748998349654 0.9351428495359961 0.9396964163796807 0.47391018654465605 0.9605958155042843 0.6130854889120821 0.8659543342804457 1.0 11.526652878227097 -5.995737133062965 24.99782393433177 0.8002428926148399 1.2864493471880498 0.24900404801299025 0.3040784530013778 107.18845712679634 628541.6885530495 0.0383414044627419 0.118531130127074 1.0098639450042257e-06 5.995737133062965 0.4862064545732099 ELRGT(ph)QR ddPTM_A549_PD325901_60min_R1 2 ELRGTQR 7 1 C9J0A7;Q9UQN3;A0A087WW88 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 ELRGT(1)QR;ELRGT(1)QR 64.04 0.010326 46482000.0 4219.8 6346.799999999999 6320.7 5251.0 5662.4 4967.799999999999 4624.4 5186.299999999999 4138.9 5754.4 7906.6 True False 4648.190989547426 6881.66711009654 6749.660711456786 5575.342344113743 5264.692558219528 4927.343883868838 4800.38407256878 5082.855177926355 3964.9564264124597 5391.066201947954 6934.138324066934 0.6703343331664634 0.9924329150186869 0.9733957408997935 0.8040425621108399 0.7592425060150428 0.7105920957427493 0.6922827102983593 0.7330190054451085 0.5718023265631911 0.7774673578744021 1.0 12.759500900760802 -4.961349576030707 15.458408558123937 0.7973155477774655 0.16789899293818283 0.07686982706381118 0.12989082209736558 3420914.9575969917 39633579.68823048 0.02330716595185914 59410603.58235883 1.0930761638501364e-05 4.961349576030707 -0.6294165548392827 ELRMS(ph)LPAR ddPTM_A549_PD325901_60min_R1 1 ELRMSLPAR 9 1 C9JXU1;A6NN40;Q2M3G4-2;Q2M3G4 C9JXU1 SHROOM1 Protein Shroom1 1 ELRMS(1)LPAR 107.18 0.00013843 7134800.0 307.1 373.83 500.35 423.53 488.39 434.49 480.77 516.39 418.25 504.28 483.73 True False 338.27656592492906 405.3339660564991 534.3067598489732 449.69048619358085 454.087171254033 430.9516574947003 499.06596543743854 506.09019634988186 400.6724070035544 472.4396747390368 424.23427661711736 0.7973815049136932 0.9554484123458127 1.2594615506073292 1.0600050749775658 1.0703688888011722 1.0158341304506273 1.1763923684267945 1.1929498021364304 0.9444602406918944 1.113629192120716 1.0 8.728717379968415 -8.827880119335145 24.999910605805155 0.9737727879778079 1.0707056498768153 0.0 0.12575774437360077 88.35882180910757 33246.09720876602 0.02076748870967691 0.022108531085200753 1.4863458697897608e-09 8.827880119335145 0.0969328618990074 ELS(ph)ALKK ddPTM_A549_PD325901_60min_R1 1 ELSALKK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELS(1)ALKK 45.137 0.030839 4454200.0 1652.1 1621.1 1527.5 1639.9 2052.5 1265.8 1263.7 1623.6 1700.4 1519.6 2122.5 True False 1819.8199757882603 1757.7157862509446 1631.1653356036898 1741.1928985168788 1908.3394807406016 1255.491744474653 1311.7907950231736 1591.2160243104395 1628.9381013002833 1423.652196663441 1861.4459556360587 0.9776378251961795 0.9442744125495337 0.8762893871105263 0.9353980400263142 1.0251919884982743 0.6744712306437335 0.7047160252229471 0.8548279467865177 0.8750928794726532 0.7648098470723406 1.0 10.862208014916675 -4.24785313923338 15.298943111820982 0.9080185504332409 0.8848917016036103 0.0 0.11693286692675221 0.0 0.0 0.01552775759095228 0.0 5.651280458719206e-05 4.24785313923338 -0.023126848829630564 ELS(ph)APAR ddPTM_A549_MK2206_60min_R1 2 ELSAPAR 7 0 F5H672;F5H5N2;B4DNC9;B3KQ30;Q9H1K1 F5H672 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial 1 ELS(1)APAR;ELS(1)APAR 77.732 0.017093 98620000.0 3946.8 3563.0 3047.8 3000.6000000000004 4323.6 3201.5 3010.2 2541.1 4139.0 5095.0 4739.3 True False 4612.923350004384 3744.3414811965386 3480.023869425133 3735.747134702051 3687.6041674382855 3540.2806050162944 3557.1143753400743 2901.308706792373 3201.5231086248273 3944.0359613688197 3562.4010119741474 1.2948916571995013 1.0510724280087622 0.9768759490377069 1.0486599128355405 1.035145721956427 0.993790590423846 0.998515990587162 0.8144250737186316 0.8986981246254095 1.1071285765167647 1.0 11.79863421138315 -2.0000000000021196 0.6605475913726295 0.9518104088246087 32.04254901137676 0.5514643766860855 0.07704026951732597 96.74702395003685 0.5538849593429132 0.011234429203984053 4418.021942127588 0.009999999999951194 2.0000000000021196 31.090738602552147 ELS(ph)APAR ddPTM_A549_PD325901_60min_R1 2 ELSAPAR 7 0 F5H672;F5H5N2;B4DNC9;B3KQ30;Q9H1K1 F5H672 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial 1 ELS(1)APAR;ELS(1)APAR 82.426 0.014968 113514000.0 4188.2 4614.1 4508.5 4624.5 4474.7 4892.700000000001 4988.5 5136.6 4873.4 4707.1 5100.6 True False 4613.382980810117 5002.9464001853585 4814.473921812922 4910.144861998474 4160.412508876967 4852.855473369516 5178.34009731194 5034.146483415256 4668.587945705009 4409.892902681287 4473.258535367389 1.0313249154581268 1.1184120838601308 1.076278932627691 1.0976662366319507 0.9300630571613656 1.0848591546857576 1.1576214646146405 1.125386883770133 1.0436660230552888 0.9858345695458671 1.0 12.127110427067569 -9.345680112123638 1.7460031680434045 1.013125340506179 1.0769222761382728 0.22013103773396214 0.05746957158399973 0.39729823110159035 2.487804769585826 0.012786124709278097 0.011090800837203287 4.5114888449746605e-10 9.345680112123638 0.06379693563209377 ELS(ph)DLEEENR ddPTM_A549_MK2206_60min_R1 1 ELSDLEEENR 10 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 ELS(1)DLEEENR 112.13 0.00014233 3295800.0 219.66 310.3 205.8 0.0 330.93 292.72 357.62 252.76 477.28 353.53 357.94 True False 256.7332378286113 326.09294460153995 234.98553459140766 0.0 282.25063538032026 323.69543610818977 422.59492489174045 288.5895040450355 369.1768420595451 273.66732746275153 269.0536193585606 0.9542084527265541 1.2119998436704342 0.8733780840846028 0.0 1.0490497621002912 1.2030889488864653 1.570671771296856 1.0726096334739879 1.3721311125257638 1.0171479131750403 1.0 8.071749904095846 -6.9893703611040925 24.996827627986736 1.2026578655009565 0.7658242269460702 0.30488041837571167 0.3146669485947058 220.5485992837561 518641.7582750265 0.046907123141910215 0.0885854384784786 1.024777635485614e-07 6.9893703611040925 -0.4368336385548863 ELS(ph)DLEEENR ddPTM_A549_PD325901_60min_R1 3 ELSDLEEENR 10 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 ELS(1)DLEEENR;ELS(1)DLEEENR;ELS(1)DLEEENR 93.258 0.00060291 10839760.0 648.95 444.82 421.23 646.12 838.95 539.71 458.842 494.65999999999997 596.0799999999999 491.25 667.1700000000001 True False 714.8309262682598 482.306542495926 449.8172008617627 686.0293649550126 780.0250462203791 535.3147807002804 476.3034833979765 484.79361824673725 571.0288305240371 460.2323911627502 585.1123195390863 1.2216986421194436 0.8242973637537763 0.768770688704862 1.1724746549438956 1.333120189359254 0.914892342588115 0.8140376941185884 0.8285479591826511 0.9759302811703856 0.7865710151604594 1.0 9.192569784193804 ELS(ph)EQIQR ddPTM_A549_MK2206_60min_R1 2 ELSEQIQR 8 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 ELS(1)EQIQR;ELS(1)EQIQR 85.355 0.0029933000000000004 3549200.0 1302.44 1383.05 1535.8400000000001 1493.09 1850.1000000000001 1195.26 1010.1800000000001 1053.5 2220.7 1903.7400000000002 1774.55 True False 1522.2600303992383 1453.4413375158229 1753.645206253 1858.897117027357 1577.9527408126512 1321.7416198506255 1193.716630018283 1202.836851208438 1717.7149957291988 1473.6838117951488 1333.8802599115313 1.1412268973080095 1.0896340407738108 1.3146946236158479 1.3936011896230078 1.1829793034925846 0.9908997528296049 0.8949203807075272 0.9017577419492027 1.2877580149833876 1.1048096715164597 1.0 10.381413448796835 -7.009452170726478 24.478309149124403 1.0902586966569732 1.237398704525331 0.30246556980144845 0.13224752930642977 528.4531683327288 1368543.8384761536 0.024028302939015533 0.04367904652590707 9.78470708781408e-08 7.009452170726478 0.1471400078683578 ELS(ph)EQIQR ddPTM_A549_PD325901_60min_R1 2 ELSEQIQR 8 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 ELS(1)EQIQR;ELS(1)EQIQR 100.48 0.0023704999999999998 5357700.0 1057.28 1196.19 1560.92 1137.37 1603.7 1333.8600000000001 1187.3200000000002 1344.4 1115.4099999999999 1283.92 1755.1599999999999 True False 1164.6142872716016 1296.9971293291708 1666.853417774475 1207.6227617453146 1491.0616444646546 1322.9974863998739 1232.5041123264336 1317.5848873386037 1068.53319664276 1202.8530720848426 1539.2864468759421 0.7565936084445126 0.8425963419358954 1.082874094784266 0.7845341354081592 0.9686706769171117 0.8594875171446891 0.8006983461901205 0.8559712131635455 0.694174368137523 0.7814354985883831 1.0 10.58804601342601 -7.504547604537034 23.622019757313446 0.8474196569239271 0.8921984647145325 0.05084085138979022 0.10788067875966935 1462.5420571347988 1884672.5229333963 0.019898388976324774 0.03142335950227037 3.129337435142697e-08 7.504547604537034 0.04477880779060539 ELS(ph)ESQVHMMAAAVADGTR ddPTM_A549_MK2206_60min_R1 2 ELSESQVHMMAAAVADGTR 19 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 ELS(0.52)ES(0.48)QVHMMAAAVADGTR;ELS(0.52)ES(0.48)QVHMMAAAVADGTR 41.763000000000005 0.025172 1682420.0 815.6 951.8499999999999 941.6 754.11 1156.99 819.5799999999999 815.8900000000001 849.75 1749.06 1184.67 1185.99 True False 953.2533404944709 1000.2950993199344 1075.133038733087 938.8669838532842 986.798303655385 906.3074116068267 964.1266519487784 970.2046647502327 1352.9007026748827 917.0522242109522 891.4759513411725 1.069297875125356 1.1220662742669052 1.206014629015638 1.0531601917480944 1.1069264427950138 1.0166369718031554 1.0814948518782894 1.0883127730934496 1.5175964092351837 1.028689806866132 1.0 9.800052069679067 ELS(ph)ESQVHMMAAAVADGTR ddPTM_A549_PD325901_60min_R1 1 ELSESQVHMMAAAVADGTR 19 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 ELS(0.525)ES(0.475)QVHMMAAAVADGTR 61.801 0.00081617 2375700.0 434.8 605.77 624.58 622.31 614.07 715.28 548.76 715.07 545.47 703.42 685.26 True False 478.9405759171575 656.8203638499996 666.9677547046497 660.7486753314461 570.939841626495 709.4549968303284 569.6433620929942 700.8073678884368 522.5457928230217 659.0059411535916 600.9773642210445 0.7969361317591974 1.0929203044133549 1.1098051181497302 1.0994568425848685 0.95001887860871 1.180502027309942 0.9478615934750491 1.1661127516787373 0.8694933019654048 1.096557009277314 1.0 9.231166842706125 -8.778802341314886 24.992275944844053 0.9383718452749631 1.0470468819428635 0.0 0.11914435649249816 302.94357899989984 436055.93487905274 0.01833722268004123 0.01954452730167283 1.6641698849248174e-09 8.778802341314886 0.10867503666790046 ELS(ph)GTIK ddPTM_A549_MK2206_60min_R1 1 ELSGTIK 7 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 1 ELS(0.998)GT(0.002)IK 86.67 0.013046 5877600.0 2504.1 2629.0 2198.0 1991.7 2901.6 2569.1 2503.5 2129.4 3249.5 3416.8 3187.4 True False 2926.7308606329125 2762.804870633091 2509.7094510783 2479.66658941081 2474.7784837262784 2840.960456769439 2958.353544171109 2431.248971013999 2513.4934383852083 2644.942506929339 2395.8806122352225 1.2215679052147912 1.1531479726176959 1.0475102299596144 1.0349708481915632 1.032930635645258 1.1857687909244283 1.2347666778818043 1.0147621540898817 1.049089602190261 1.1039542176777146 1.0 11.226340304463445 ELS(ph)GTIK ddPTM_A549_PD325901_60min_R1 1 ELSGTIK 7 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 1 ELS(0.78)GT(0.22)IK 75.825 0.017957 8018900.0 2242.4 1929.3 2390.3 2031.9 2339.1 1953.4 1710.8 1970.3 1888.4 2189.4 2571.3 True False 2470.046797232368 2091.8888818789396 2552.52013204157 2157.405848220285 2174.809685456926 1937.4921580477062 1775.9054301856802 1931.0008208295521 1809.0371150878952 2051.160910354658 2255.046400813663 1.0953418946683888 0.9276478218471013 1.1319146830506783 0.956701311086926 0.9644190401901328 0.8591806170146312 0.7875250059355321 0.8563020344649277 0.8022172468092723 0.9095870087704452 1.0 11.138941403967596 -6.776719705649709 2.030317992333644 0.8882732535722399 1.037584195339294 0.49850135647526095 0.07459925251856145 0.28638608238071755 2.4036303414777875 0.013758346005062788 0.03149876277019236 1.6721694869702291e-07 6.776719705649709 0.14931094176705406 ELS(ph)LDDPEVEQVSGR ddPTM_A549_MK2206_60min_R1 1 ELSLDDPEVEQVSGR 15 0 L7N2F4;C9J5N1;Q9BTE6;Q9BTE6-2;Q9BTE6-3 L7N2F4 AARSD1;PTGES3L-AARSD1 Alanyl-tRNA editing protein Aarsd1 1 ELS(0.988)LDDPEVEQVS(0.012)GR 47.666000000000004 0.028464 820470.0 371.6 197.31 118.14 196.44 547.43 405.02 232.34 166.3 445.57 374.68 345.41 True False 434.3169952522628 207.35223622085013 134.89402845786637 244.56780881852677 466.9037721761358 447.8789475694828 274.553170542327 189.87353427239051 344.6491064290805 290.0395277734385 259.63516416896795 1.6727972755247194 0.7986292491794654 0.5195522297206194 0.9419672007885823 1.7983071502297723 1.7250319270235972 1.057457572902762 0.7313090076998304 1.327436164250796 1.1171041823313415 1.0 8.02034198041762 -5.2346374785136165 23.154218470695824 1.1310037460485254 1.6727992911942617 0.15757026703456511 0.3740867382974465 4993.750317058372 4313927.116186149 0.053496081471888536 5.202347094243102 5.825893234713903e-06 5.2346374785136165 0.5417955451457364 ELS(ph)LDDPEVEQVSGR ddPTM_A549_PD325901_60min_R1 1 ELSLDDPEVEQVSGR 15 0 L7N2F4;C9J5N1;Q9BTE6;Q9BTE6-2;Q9BTE6-3 L7N2F4 AARSD1;PTGES3L-AARSD1 Alanyl-tRNA editing protein Aarsd1 1 ELS(1)LDDPEVEQVSGR 47.201 0.029325 1077400.0 313.88 459.74 314.24 132.77 460.52 235.78 361.06 288.99 301.41 337.45 284.58 True False 345.7448665337567 498.4839032576701 335.5662160786276 140.97090135745225 428.17466390775235 233.85988585260984 374.80033587961327 283.2258677417307 288.74278588150935 316.1433494104227 249.57846410125322 1.3853153066664 1.9973033532870716 1.344531938230413 0.5648360000334836 1.7155913890632934 0.9370194928266471 1.501733481810185 1.1348169352738178 1.156921879943805 1.266709251332536 1.0 7.9633496405022335 -2.0000000000782903 0.2495606080578351 1.0478972167078675 4.912652430701305 0.12737296319405766 0.34634092956259177 48.60848814221753 0.5899599095904615 0.15055301240498672 80.0854613548395 0.0099999999981973 2.0000000000782903 3.864755213993438 ELS(ph)NS(ph)PLRENSFGSPLEFR ddPTM_A549_PD325901_60min_R1 1 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.784)NS(0.844)PLRENS(0.343)FGS(0.029)PLEFR 40.937 0.026930000000000003 2659600.0 253.32 386.48 370.45 248.42 502.96 356.71 290.08 498.83 349.5 421.18 489.13 True False 279.0368599156723 419.0500259516782 395.5909646968161 263.76433919724536 467.63382471780426 353.80507202682344 301.1191531378667 488.8804443254356 334.811730418989 394.58662292097137 428.97011085053776 0.6504808909935794 0.9768746477949465 0.9221877111961498 0.614878129094515 1.0901314867616447 0.8247779112752603 0.7019583544896044 1.1396608573872686 0.7805013028883134 0.9198464250542008 1.0 8.744733319014863 -11.033912954472386 1.24917073914843 1.002193297596144 0.8545699057819093 0.05060127653604274 0.16252248525720728 0.887949627552569 2.4064870513907874 0.11458906106049309 0.024118685385608598 9.248835295222927e-12 11.033912954472386 -0.14762339181423478 ELS(ph)PAALEK ddPTM_A549_MK2206_60min_R1 2 ELSPAALEK 9 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 ELS(1)PAALEK;ELS(1)PAALEK 116.55 0.00019037 305690000.0 10909.0 12316.0 12274.7 11294.9 15857.900000000001 11446.599999999999 11022.400000000001 11896.0 17259.800000000003 17490.7 17287.0 True False 12750.172500556866 12942.831794110745 14015.437033280617 14062.151007047321 13525.223916833113 12657.871614361866 13025.027403743416 13582.294429972084 13350.482858236957 13539.538722181287 12994.160803071567 0.9812232350967193 0.9960498404061086 1.0785950124587993 1.082190009817587 1.0408693660029213 0.9741199763642906 1.0023754208632352 1.0452613782308662 1.0274217058389152 1.0419709996955557 1.0 13.665575843344834 ELS(ph)PAALEK ddPTM_A549_PD325901_60min_R1 2 ELSPAALEK 9 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 ELS(1)PAALEK;ELS(1)PAALEK 130.01 4.9873e-05 558350000.0 15827.699999999999 16686.0 16826.3 16147.8 20420.0 18021.9 17314.4 18245.1 18671.5 18458.6 18067.7 True False 17434.516452263084 18092.18777952209 17968.233902761614 17145.212931685375 18985.76964517568 17875.135621541896 17973.30896680322 17881.18716749593 17886.80178689029 17293.120845835612 15845.487440586865 1.1002827472259424 1.1417880230797124 1.1339653620713186 1.0820249611109707 1.1981814833001128 1.1280899807320701 1.1342856465725453 1.1284718904698883 1.128826226012762 1.0913593482483068 1.0 13.951784420292057 -10.582135265630225 0.651094923643773 0.9889361988329413 1.1334507750192417 0.34423248436117737 0.03782525810269164 0.32226325950409174 0.21705896244437844 0.025823144227853992 0.0053953954233506365 2.617367674284954e-11 10.582135265630225 0.14451457618630048 ELS(ph)PAALEKR ddPTM_A549_MK2206_60min_R1 2 ELSPAALEKR 10 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 ELS(1)PAALEKR;ELS(1)PAALEKR 96.23 0.00022615 22900000.0 3329.6000000000004 3958.6000000000004 4552.1 3467.5 5122.5 2220.65 2507.5 1519.43 5704.299999999999 6696.6 6585.400000000001 True False 3891.5550790956245 4160.075831452322 5197.656229414707 4317.0376556619885 4368.987035734719 2455.637709051831 2963.0802923942715 1734.8138555592197 4412.285157895287 5183.833409009316 4950.06343220614 0.7861626689016468 0.8404085904002776 1.0500181059494464 0.8721176434981511 0.8826123332701522 0.4960820689841957 0.5985944085313849 0.35046295452946336 0.8913593165671463 1.047225652762795 1.0 12.273231297277139 -5.290406777964548 5.773162340153312 0.8526952204874938 0.7850596331374282 0.0 0.2226516288096524 1.0376559666066478 114.92694752476234 0.03303977847419602 0.2293551533340563 5.1238124195015e-06 5.290406777964548 -0.06763558735006558 ELS(ph)PAALEKR ddPTM_A549_PD325901_60min_R1 2 ELSPAALEKR 10 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 ELS(1)PAALEKR;ELS(1)PAALEKR 110.15 8.138399999999999e-05 47230000.0 5782.1 5625.3 5784.5 6879.9 7446.2 9084.9 7758.400000000001 8122.9 7659.7 7843.3 7990.9 True False 6369.094535442957 6099.3637729920665 6177.070955024253 7304.855797613429 6923.204599995451 9010.915586489 8053.650157559384 7960.882387208227 7337.789446324269 7348.072699454049 7008.069958488663 0.908822910326154 0.870334315884517 0.8814225587948296 1.0423491547434223 0.9878903379966381 1.285791329119703 1.1491965983878687 1.1359593203782805 1.0470485440055042 1.0485158885369787 1.0 12.774801461464886 -6.296481773002702 3.8888940061991812 1.0581883265160124 0.8832850760650747 0.5165830300556655 0.082934048197 0.1737245746065036 5.7434286958495075 0.01329365968191621 0.03401892757846126 5.052638500209461e-07 6.296481773002702 -0.1749032504509377 ELS(ph)PAGS(ph)ISK ddPTM_A549_MK2206_60min_R1 2 ELSPAGSISK 10 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 2 ELS(1)PAGS(0.968)IS(0.032)K;ELS(0.998)PAGS(0.98)IS(0.022)K 73.881 0.0019057000000000002 8380600.0 4320.799999999999 5603.2 3939.3 4427.5 6227.700000000001 5666.0 4790.9 5858.5 6954.4 7216.1 5683.1 True False 5050.045406582279 5888.37894679777 4497.951974810167 5512.237698758025 5311.6135797843035 6265.572359213593 5661.344515585926 6688.960315903788 5379.239503894777 5585.977998200891 4271.829424419276 1.1821739364672306 1.3784208969435274 1.052933422176994 1.2903693362024569 1.2434048863049767 1.4667187606783603 1.3252740109948433 1.565830385845311 1.2592355568190894 1.3076313315015533 1.0 12.060638325541126 -10.158935305425056 0.9562689078681597 1.023315082844067 1.3078027745383496 0.015555867152440617 0.15558006707950786 0.35748248945612493 0.6501075744183246 0.055501590298275894 0.025259479177755558 6.935291097221351e-11 10.158935305425056 0.2844876916942827 ELS(ph)PAGS(ph)ISK ddPTM_A549_PD325901_60min_R1 1 ELSPAGSISK 10 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 2 ELS(1)PAGS(0.981)IS(0.019)K 81.278 0.0013009 8550400.0 4054.5 4322.1 4089.6 4455.6 5188.5 4728.9 4329.8 4465.3 5789.1 5213.2 5855.7 True False 4466.109855234858 4686.338535411272 4367.144848762585 4730.812292598208 4824.07765935328 4690.389406261799 4494.572908357471 4376.236088539917 5545.804259137541 4884.0376623097245 5135.486022340668 0.8696567054814571 0.9125404129277169 0.8503858894298215 0.9212005002093226 0.9393614622583565 0.9133292128257023 0.8751991318455425 0.8521561677905809 1.0798986181662036 0.9510370860835607 1.0 12.32628510430968 -8.7613087018232 24.99999994389447 1.037729906592606 0.8937834975322088 0.601318707514805 0.041367515694168834 1.2388898763464344 237000.54048165062 0.00666516517773417 0.007325733670291907 1.732572026593845e-09 8.7613087018232 -0.14394640906039724 ELS(ph)PAGSISK ddPTM_A549_MK2206_60min_R1 2 ELSPAGSISK 10 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 ELS(1)PAGSISK;ELS(1)PAGSISK 132.69 9.6497e-07 525290000.0 27677.0 30676.0 30927.0 27227.0 37242.0 30246.0 29171.0 29393.0 39671.0 39172.0 40329.0 True False 32348.200962316645 32237.277372210247 35312.9136458137 33897.616222266486 31763.7511341791 33446.611644330114 34470.993104459914 33559.54776228726 30685.58184156933 30323.017993864476 30314.196276223374 1.0670974307733379 1.0634383006055557 1.1648969124578445 1.118209300797255 1.0478176905878474 1.1033316318059079 1.1371237683611912 1.1070571509299536 1.0122512093661293 1.000291009451833 1.0 14.887705952155564 -8.779518655826015 6.793743123949815 1.0055869211721833 1.1021363123451455 0.6463777333383541 0.03193098249392755 0.07063161492436827 13.090497587635246 0.005638883848248241 0.006091310795944382 1.6614273069208296e-09 8.779518655826015 0.09654939117296224 ELS(ph)PAGSISK ddPTM_A549_PD325901_60min_R1 4 ELSPAGSISK 10 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 ELS(1)PAGSISK;ELS(1)PAGSISK;ELS(0.998)PAGS(0.002)ISK;ELS(1)PAGSISK 148.78 3.1695e-08 824990000.0 57174.0 56596.3 58626.5 55068.1 63393.0 57720.7 59255.1 59599.0 63862.0 59868.5 67290.0 True False 62978.262390725744 61365.86882573213 62605.246839783795 58469.53146827083 58940.4943739776 57250.641756437086 61510.08525613487 58410.251190488954 61178.10222608721 56088.392692777845 59013.75658645481 1.0671793499277233 1.0398570159795113 1.0608585262330736 0.9907779956799276 0.9987585570430535 0.9701236638370111 1.0423007924605334 0.9897734794245521 1.0366752731028341 0.9504291191937371 1.0 15.848763677171064 -6.249558085543458 24.858934149912344 1.0113627655499622 1.0543541728297317 0.4074287891429397 0.027971130939876316 525.5597726897939 1099614.598191296 0.0031458218082304813 0.008256153690621496 5.629138243766235e-07 6.249558085543458 0.04299140727976947 ELS(ph)PEAR ddPTM_A549_MK2206_60min_R1 1 ELSPEAR 7 0 Q9P0B6 Q9P0B6 CCDC167 Coiled-coil domain-containing protein 167 1 ELS(1)PEAR 82.426 0.014968 68684000.0 2303.9 2272.2 2171.4 2007.7 2637.2 1724.0 2154.9 1873.8 2690.1 2974.2 3118.4 True False 2692.741995052982 2387.8452746491107 2479.3371710970955 2499.586590129078 2249.2713734777153 1906.4325357014197 2546.417436522599 2139.4168882718295 2080.796645206969 2302.3261543283893 2344.0152165383447 1.1487732571248574 1.0186987088656765 1.057730834511644 1.0663696090763788 0.9595805341227487 0.8133191808015864 1.086348509410772 0.912714590407537 0.8877061166351563 0.9822146793605196 1.0 11.194766219931273 -6.782926351554602 5.3476913481310655 0.9440082014195018 1.0685741925433412 0.4147726773277203 0.07083181253772025 0.13941509021509893 11.083575447788235 0.010343059615948572 0.020459364091003077 1.6484419135914093e-07 6.782926351554602 0.12456599112383937 ELS(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 ELSPEAR 7 0 Q9P0B6 Q9P0B6 CCDC167 Coiled-coil domain-containing protein 167 1 ELS(1)PEAR 119.86 0.006702199999999999 131340000.0 3163.6 3332.8 3795.4 3273.3 4133.3 3924.0 3388.8 3613.1 3734.8 3637.4 4588.5 True False 3484.7663430807693 3613.666752462618 4052.9786675942687 3475.484306796325 3842.9912671109028 3892.044244998054 3517.762638422516 3541.0338860778847 3577.839344116854 3407.7339432374324 4024.143588898027 0.8659647117698996 0.8979964736924774 1.0071655193357893 0.8636581250193544 0.9549836337135448 0.9671733025967528 0.8741642937710932 0.8799472006533353 0.8890933598859506 0.8468221543184565 1.0 11.974466068755634 -10.820686379345824 1.072865642113193 0.9998834836978784 0.9118260609018997 0.0 0.06305163131802956 0.46022794956737606 0.9424289425317061 0.030202431946724957 0.0075195726242389465 1.511171034629552e-11 10.820686379345824 -0.08805742279597872 ELS(ph)PPPGLPSK ddPTM_A549_PD325901_60min_R1 2 ELSPPPGLPSK 11 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 ELS(1)PPPGLPSK;ELS(1)PPPGLPSK 96.64 0.00028133 6932700.0 5146.3 6013.7 5139.3 6088.8 6202.5 6296.4 6212.9 6305.1 6635.0 6256.4 7544.8 True False 5668.748587494174 6520.495604081983 5488.083803121465 6464.89134733189 5766.857797463378 6245.124205964763 6449.335309329328 6179.339834244735 6356.154023834031 5861.369836276096 6616.837430427771 0.85671571156127 0.9854398982355594 0.8294119148045423 0.9770364491052551 0.8715429173073332 0.9438231287421887 0.9746854712905325 0.9338811628994862 0.9606030208034162 0.8858264840121914 1.0 12.691926118970176 -8.032289773848326 0.17047718087511346 1.028473747010551 0.8572515845150578 0.0 0.056757461947676495 3.2092062823636582 0.3641487830318565 0.1282435134630578 0.19051720729941696 9.283467602585047e-09 8.032289773848326 -0.17122216249549316 ELS(ph)PPRPR ddPTM_A549_MK2206_60min_R1 1 ELSPPRPR 8 1 Q99956 Q99956 DUSP9 Dual specificity protein phosphatase 9 1 ELS(1)PPRPR 46.001000000000005 0.012295 3096100.0 288.6 406.45 375.53 379.65 515.17 327.74 426.21 268.2 433.41 572.21 580.45 True False 337.30862440743545 427.13656891168483 428.78580080228994 472.66426704313585 439.3891754415725 362.4212292637953 503.64684004839984 306.2181713280523 335.2433270135506 442.9473635828959 436.30824539497235 0.7730970660480723 0.9789789063578554 0.9827588759275621 1.0833264602076265 1.0070613610426067 0.8306540916633603 1.1543372039473345 0.701839065752345 0.7683634919850489 1.0152165774036963 1.0 8.769203927935697 -8.264632241739596 24.999722967305892 0.8734015063002551 0.973593134613815 0.1252185302595319 0.12904494412464357 494.21435157944364 3869632.5323070083 0.021994417148827255 0.027161651816741152 5.437105478143891e-09 8.264632241739596 0.10019162831355988 ELS(ph)PPRPR ddPTM_A549_PD325901_60min_R1 1 ELSPPRPR 8 1 Q99956 Q99956 DUSP9 Dual specificity protein phosphatase 9 1 ELS(1)PPRPR 53.327 0.007046300000000001 3854100.0 584.76 735.24 534.67 748.78 921.93 909.97 796.06 646.39 729.51 874.34 983.85 True False 644.1244047224402 797.2012551250044 570.9559214318983 795.0304399972365 857.176817285838 902.5595060195916 826.3544989207463 633.4972443668544 698.8512316393611 819.1340231842025 862.8426871390045 0.7465143001422592 0.9239242181774148 0.6617149683739708 0.9214083306812063 0.9934334845301253 1.0460301970134085 0.9577116561777386 0.7341978483556384 0.8099404932741532 0.9493434149627782 1.0 9.75295374202686 -10.946042561807959 1.2454877374494322 0.9989944336726332 0.8657191768788524 0.11551366240433014 0.11363165901304667 0.7185418600934862 2.005333854407424 0.07979574263347572 0.01925229318178243 1.1322893909640415e-11 10.946042561807959 -0.13327525679378083 ELS(ph)PQHK ddPTM_A549_MK2206_60min_R1 6 ELSPQHK 7 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK 85.67 0.0041496 404362900.0 12770.0 15900.400000000001 12074.88 14128.239999999998 20327.0 15109.8 12936.5 15744.7 20169.0 19557.3 19140.2 True False 14925.26380347523 16709.66244390049 13787.2795526098 17589.6594342408 17336.925227014086 16708.709006926496 15286.894597231698 17976.559441121495 15600.753703274735 15139.292346865239 14387.160097353535 1.0374016624879763 1.1614288247876086 0.9583044505875707 1.2225942656658384 1.2050276155753037 1.1613625547963424 1.0625373245164391 1.2494863002482481 1.084352547529129 1.052278020430874 1.0 13.812494224038662 -9.67779515335303 1.0882356683064445 1.0155485177658734 1.130834793243845 0.17541169137771662 0.08351828491837544 0.42946998440293155 1.0478698893035785 0.02336614003473966 0.015745141925697592 2.0999301384678571e-10 9.67779515335303 0.11528627547797154 ELS(ph)PQHK ddPTM_A549_PD325901_60min_R1 4 ELSPQHK 7 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK 80.455 0.0048757 561897000.0 26315.6 40015.3 27106.100000000002 50533.3 53443.0 32985.2 24671.4 23929.6 43782.0 32234.3 37304.899999999994 True False 28987.140339479192 43387.52976470755 28945.682948220747 53654.627171548855 49689.34804834102 32716.57946740822 25610.283627708097 23452.305355591954 41941.99479600625 30199.02079685996 32716.633795245067 0.886006198586729 1.3261611826034914 0.8847390330366941 1.6399800635769213 1.5187793572932529 0.9999983394429517 0.7827909126589366 0.7168312456093952 1.2819776954590594 0.9230479206955879 1.0 14.997736696999798 ELS(ph)PQHKR ddPTM_A549_MK2206_60min_R1 4 ELSPQHKR 8 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 ELS(1)PQHKR;ELS(1)PQHKR;ELS(1)PQHKR;ELS(1)PQHKR 96.171 0.0010421 618618000.0 13965.88 14742.750000000002 13879.82 13267.550000000001 20539.83 13118.75 13297.55 11868.06 21761.199999999997 20899.7 22841.9 True False 16322.97911101632 15493.09300362344 15848.187185289164 16518.10034560295 17518.448215948276 14506.967417478536 15713.54270872481 13550.39384940941 16832.322945495664 16178.443254527967 17169.62582563085 0.9506892739997482 0.9023547257794822 0.9230362586953386 0.9620536005475844 1.0203162488140367 0.8449204173000967 0.9151942429209845 0.789207288907913 0.9803546749614275 0.9422711606432772 1.0 14.067570978855201 -8.968854709903178 24.99998351375341 0.9913330444113077 0.9143985460777057 0.16079371367152628 0.05878243672027117 174.79659160204244 140308.3834762742 0.009867958157766086 0.01041019106720154 1.0743487678848975e-09 8.968854709903178 -0.076934498333602 ELS(ph)PQHKR ddPTM_A549_PD325901_60min_R1 3 ELSPQHKR 8 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 ELS(1)PQHKR;ELS(1)PQHKR;ELS(1)PQHKR 71.524 0.0025453000000000003 951518000.0 22011.4 22977.7 22882.7 24773.5 26848.9 27835.399999999998 27036.9 27645.5 25959.3 25899.399999999998 27679.8 True False 24245.981124063754 24914.11141924515 24435.657626853383 26303.70283029932 24963.125887676662 27608.71773119746 28065.804024659385 27094.088815024792 24868.32089689747 24264.10746398075 24275.36007670906 0.9987897624359651 1.0263127443019449 1.0066033026755439 1.0835556196563423 1.0283318479641206 1.137314447404905 1.156143675561256 1.1161148065119806 1.0244264479832503 0.9995364594925573 1.0 14.567205074865585 -4.332486727950828 16.254371567725265 1.0390228106942927 1.0481333898108516 0.0 0.058422800936467977 0.0 0.0 0.008540622030105256 0.0 4.6506458833376246e-05 4.332486727950828 0.009110579116558881 ELS(ph)TPDKVLIPER ddPTM_A549_MK2206_60min_R1 1 ELSTPDKVLIPER 13 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 ELS(0.543)T(0.457)PDKVLIPER 52.527 0.0066598 3001900.0 712.68 621.02 631.31 637.88 733.13 831.13 647.78 695.48 975.48 790.08 1064.0 True False 832.9629606468844 652.6272654091147 720.8392509373252 794.1606286355212 625.2875481714389 919.079624940557 765.4732409998645 794.0664198181728 754.5353375214655 611.6003792656089 799.7794350938937 1.04149084622199 0.8160090604636472 0.9012975569354307 0.9929745549687549 0.7818249891584552 1.1491663633894982 0.9571054310867575 0.9928567614706795 0.9434292811403477 0.7647113096797836 1.0 9.643458375061934 -7.241137718949992 24.99183066589269 0.9839390740759593 0.9061707000959793 0.06353594063407608 0.10766979501400836 1099.757324624966 1353828.5648457834 0.011511774988906633 0.019924373413049087 5.7393443322800566e-08 7.241137718949992 -0.07776837397997993 ELSDIAHR ddPTM_A549_MK2206_60min_R1 1 ELSDIAHR 8 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 119.41 0.0013144 3583500.0 189.2 212.58 125.55 293.28 253.67 161.86 216.51 420.88 477.7 475.18 493.3 False True 221.1323345041121 223.39941399740678 143.35487788120128 365.1336131658395 216.35547903461708 178.98791776602766 255.8470644491659 480.54102889094224 369.50171273014746 367.83650797315755 370.7999956126108 0.5963655262152097 0.6024795486535034 0.38660970759818913 0.9847184937599319 0.5834829600716934 0.48270744305246244 0.6899866976170607 1.2959574826774867 0.9964986976865563 0.9920078541679668 1.0 8.534497416667875 -8.083995047909651 7.511573102350038 1.0202097933113816 0.6099693340366908 0.6447460442104115 0.1610740013304133 0.1398153126185745 11.108288445284709 0.02466442409220029 0.031921961030005684 8.241475123916101e-09 8.083995047909651 -0.41024045927469077 ELSDIAHR ddPTM_A549_PD325901_60min_R1 2 ELSDIAHR 8 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 153.78 0.00051604 19771300.0 873.92 813.02 1163.3500000000001 1205.25 1384.3799999999999 1234.22 1183.22 1228.5 1201.0900000000001 1216.62 1511.95 False True 962.6397150540996 881.5360486939386 1242.301926791851 1279.6955551786496 1287.1459246517284 1224.1689215243362 1228.2480845828281 1203.9966037603938 1150.6123642029868 1139.8024055703313 1325.9897350407264 0.7259782558003989 0.6648136296974148 0.9368865338566855 0.9650870752324074 0.9707057985725621 0.9232114617288022 0.9262877774427898 0.9079984346360074 0.8677385154626759 0.8595861456916357 1.0 10.372853891739164 -5.765841604380078 24.999999999878362 0.936718596411775 0.6953959030718704 0.8180888033086111 0.04227484953258849 31.979043753343966 181612.47129029952 0.006855428930555138 0.02243099951502067 1.7145825349869994e-06 5.765841604380078 -0.24132269333990464 ELSDQATAS(ph)PIVAR ddPTM_A549_MK2206_60min_R1 2 ELSDQATASPIVAR 14 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 ELSDQAT(0.009)AS(0.991)PIVAR;ELSDQAT(0.001)AS(0.999)PIVAR 223.7 6.4229e-47 28661000.0 3884.6000000000004 4599.9 4143.8 4661.299999999999 6166.5 4988.1 4862.3 4469.9 7827.9 6133.5 6054.200000000001 True False 4540.225510648383 4834.01526223855 4731.45314985362 5803.3187092537055 5259.416018713157 5515.937431167194 5745.716971369356 5103.522013494636 6054.893148587652 4747.938090099249 4550.775052580315 0.9976818142382251 1.0622399934924571 1.0397027089200683 1.2752374358656096 1.1557187419604578 1.2120874724492536 1.262579869359067 1.121462158539546 1.3305191046862432 1.0433251556582965 1.0 12.15189655948773 -6.175831171713793 10.130479950163094 1.1746697757450522 1.0356431668201005 0.3124715577286561 0.09373195614308304 0.6583814469000829 74.87524750456366 0.016891970470991422 0.044765426149044295 6.670660350644585e-07 6.175831171713793 -0.13902660892495167 ELSDQATAS(ph)PIVAR ddPTM_A549_PD325901_60min_R1 2 ELSDQATASPIVAR 14 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 ELSDQAT(0.013)AS(0.987)PIVAR;ELSDQAT(0.001)AS(0.999)PIVAR 210.37 3.0962e-38 40938000.0 9858.5 10344.9 8687.5 11324.2 11269.7 10940.6 10369.0 10541.2 10791.7 11695.400000000001 12314.7 True False 10859.327662555883 11216.701028429712 9277.085992181372 12023.670114875802 10478.15515035438 10851.503380944372 10763.597969134515 10330.947496588577 10338.162378147661 10956.950448050551 10800.069969315135 1.0054867879012923 1.0385766999934536 0.8589838786729324 1.113295575772854 0.9701932654255602 1.0047623220752615 0.9966229848247055 0.9565630154193986 0.9572310556802102 1.0145258761453528 1.0 13.398753038610135 -8.050996837484782 21.368123155845947 0.9774531645149563 0.9981804638257677 0.01519608087618829 0.058672510578021406 237.15047115104915 99367.2222473165 0.008623368948390633 0.011132999728897539 8.892075930088507e-09 8.050996837484782 0.02072729931081141 ELSES(ph)QVHMMAAAVADGTR ddPTM_A549_PD325901_60min_R1 1 ELSESQVHMMAAAVADGTR 19 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 ELS(0.176)ES(0.824)QVHMMAAAVADGTR 84.94200000000001 2.4455999999999998e-05 2435400.0 339.45 298.77 440.33 626.52 566.36 375.63 421.0 572.78 511.8 618.56 837.08 True False 373.91071411011774 323.9483964334062 470.2134417193926 665.2187174698421 526.5808274359302 372.57099381972967 437.02138538003936 561.3554535627824 490.29082583244224 579.5040160358902 734.1244666873179 0.5093287733582318 0.4412717613066341 0.6405091548592514 0.9061388737956005 0.7172909381594202 0.507503850812831 0.5952960365863651 0.7646597805081435 0.6678579015965006 0.7893811503802061 1.0 9.519880874436346 -14.999999999999998 0.178123031335585 2.531715680175645 0.5585747515543505 0.32451788575466456 0.13538843751777738 29.570346614380544 0.3264293182213028 15.72996325852262 0.15111896727080312 1.000000000000004e-15 14.999999999999998 -1.9731409286212944 ELSESVQQQSTPVPLIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ELSESVQQQSTPVPLISPK 19 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQSTPVPLIS(1)PK;ELSESVQQQSTPVPLIS(1)PK 154.79 6.571200000000001e-27 4655600.0 2560.5 3650.6 2691.0 2731.46 4551.700000000001 3652.55 3331.62 3357.78 4412.0 4872.0 4702.3 True False 2992.649801785301 3836.399947026688 3072.62426426374 3400.667822619898 3882.1509596005326 4039.0604166335365 3936.9322288122034 3833.7555977699794 3412.6890445162435 3771.4118162490477 3534.5891331221983 0.8466754378158268 1.0853878067683336 0.8693016779434298 0.9621112085567909 1.0983316061324853 1.1427241652456859 1.1138302304841312 1.0846396719336708 0.9655122323939594 1.0670014743460883 1.0 11.787326808025696 -5.24337057284916 23.335672416729327 1.0112365268315606 0.8466750853282028 0.259122759342564 0.08211519597545563 1726.2152250108393 2229299.324646551 0.011771564819844165 0.467189215028828 5.709912159236078e-06 5.24337057284916 -0.16456144150335783 ELSESVQQQSTPVPLIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 ELSESVQQQSTPVPLISPK 19 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQSTPVPLIS(1)PK;ELSESVQQQST(0.001)PVPLIS(0.999)PK 170.56 1.3779999999999999e-34 13516500.0 3193.3 3042.1 3217.0 3197.7 3505.0 3440.8999999999996 3267.8 3590.9 2998.0 3778.8999999999996 3829.8999999999996 True False 3517.4814652167893 3298.4684432508784 3435.3249653925186 3395.214666496386 3258.8208915935725 3412.8784512267603 3392.157917208773 3519.2766824934474 2872.004485825835 3540.2996090888896 3358.8465797364156 1.0472289762912668 0.9820241457737926 1.0227692405236635 1.0108275522256287 0.9702202271618215 1.0160864362833104 1.0099174930088566 1.0477634506216777 0.8550567635784111 1.0540224225920773 1.0 11.713750184519002 -8.742325411220767 24.99999725198295 0.9315545688772036 1.0110785880035325 0.0 0.05297035786957152 213.54040116826997 279298.77128731215 0.009127608871371512 0.010341542477786639 1.8099833873327826e-09 8.742325411220767 0.0795240191263289 ELSESVQQQSTPVPLIS(ph)PKR ddPTM_A549_MK2206_60min_R1 2 ELSESVQQQSTPVPLISPKR 20 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQSTPVPLIS(1)PKR;ELSESVQQQSTPVPLIS(1)PKR 215.42 4.961999999999999e-67 150999000.0 4637.5 5953.1 5820.8 5457.2 7195.0 5202.299999999999 5268.0 5089.9 7069.7 7621.0 7230.3 True False 5420.196624010676 6256.087362254036 6646.276966713631 6794.214244983014 6136.625031158865 5752.8039329927415 6225.127409903496 5811.408912165001 5468.424237991044 5899.410806985633 5434.816963871604 0.9973098744708206 1.1511127980651226 1.222907231447776 1.250127518580316 1.129131868092815 1.0585092324608139 1.145416202842809 1.0692924804637993 1.0061836993486344 1.085484726753901 1.0 12.40801573302206 -8.33844088214791 1.0093623919002623 0.9994053404374686 1.151990304183893 0.2784909038224701 0.07031033794965486 0.3030541367158186 0.6039304486238332 0.013502586723247252 0.017248584958125555 4.587320859419976e-09 8.33844088214791 0.15258496374642438 ELSESVQQQSTPVPLIS(ph)PKR ddPTM_A549_PD325901_60min_R1 3 ELSESVQQQSTPVPLISPKR 20 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQSTPVPLIS(1)PKR;ELSESVQQQST(0.007)PVPLIS(0.993)PKR;ELSESVQQQS(0.006)T(0.007)PVPLIS(0.987)PKR 203.72 1.5804e-55 253468000.0 9463.7 10607.6 10383.1 10848.8 12297.0 12245.599999999999 11160.4 11884.599999999999 12514.8 12169.3 12257.599999999999 True False 10424.447857192275 11501.539679375432 11087.759604652483 11518.905736587545 11433.301142346983 12145.875893615741 11585.115129205218 11647.55232971166 11988.84647738931 11400.928321174275 10749.99290732842 0.9697167195418133 1.0699113737586443 1.0314201786211228 1.0715268220070124 1.0635635986841203 1.129849665792405 1.07768583933739 1.0834939548445062 1.1152422685987398 1.0605521714718624 1.0 13.392048087497628 -5.25929316916414 24.104694773239956 1.064285238415764 0.9697166642356311 0.4092704784166704 0.03405225789274354 122.57556299716775 1376514.6718216306 0.0062675736825316295 0.05597016114750629 5.504360008216192e-06 5.25929316916414 -0.09456857418013287 ELSGTIK ddPTM_A549_MK2206_60min_R1 2 ELSGTIK 7 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 ; 92.47 0.033992 12398800.0 5375.0 5480.5 5480.4 5387.1 7643.0 5532.1 5064.5 5439.5 7565.7 7200.5 7404.6 False True 6282.1685938668215 5759.43404089184 6257.603128157194 6706.939741836107 6518.72482462088 6117.503150089222 5984.654094050164 6210.5657827701025 5852.081029940288 5573.902049035564 5565.833463436324 1.1287022213539668 1.0347837531840178 1.1242886028238752 1.205019838609269 1.1712037141327338 1.0991171745035109 1.075248502019545 1.1158375153639117 1.0514294163460716 1.0014496634964458 1.0 12.442382026772325 -8.972646970332974 0.7114897498514569 1.0091745185117675 1.1272104043546476 0.5516242558760005 0.04230963727414278 0.340954172106241 0.37094501836218674 0.013485579174639708 0.011980507461689074 1.0650083913790663e-09 8.972646970332974 0.11803588584288005 ELSGTIK ddPTM_A549_PD325901_60min_R1 2 ELSGTIK 7 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 ; 97.79799999999999 0.032119 21748000.0 10602.9 11739.1 11934.6 10639.5 13080.5 12274.3 13200.8 14039.300000000001 12223.3 12931.0 13534.2 False True 11679.298602557568 12728.395155375038 12744.553724579899 11296.677750942334 12161.770805275248 12174.342170331201 13703.163667754927 13759.275147882207 11709.597208670757 12114.53445318174 11869.57920036258 0.9839690527698574 1.0723543725110511 1.0737157155656025 0.9517336343816851 1.0246168461392249 1.0256759708852452 1.1544776302883877 1.1592049655359224 0.9865216795817888 1.0206372314202747 1.0 13.534981169094461 ELSKEDLSPAFDHS(ph)PNK ddPTM_A549_MK2206_60min_R1 4 ELSKEDLSPAFDHSPNK 17 1 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK 154.13 2.0632e-22 120535700.0 10242.7 10879.0 11312.6 10418.8 13439.3 12062.400000000001 11966.2 13982.9 17005.199999999997 16287.200000000003 17024.2 True False 11971.41735002786 11432.694632034005 12916.896786291343 12971.406467717698 11462.396772933062 13338.83516162691 14140.303646998338 15965.018895835283 13153.549351724303 12607.910208048344 12796.621295982583 0.9355139198958876 0.8934150950941423 1.0093990036531377 1.0136586969085337 0.895736187530345 1.0423716427252991 1.105002900370084 1.247596418348912 1.0278923668588813 0.9852530536327208 1.0 13.643475323917274 -7.291275116270882 22.418622368631965 1.0424911658033438 0.953313428249054 0.3444522218224836 0.077034607940592 238.47600976572252 179190.62968549062 0.012610445091146389 0.02016247255929127 5.113577986811629e-08 7.291275116270882 -0.08917773755428982 ELSKEDLSPAFDHS(ph)PNK ddPTM_A549_PD325901_60min_R1 3 ELSKEDLSPAFDHSPNK 17 1 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLS(0.001)PAFDHS(0.999)PNK 174.7 2.0712e-30 193879000.0 11124.400000000001 11618.3 12298.3 11057.6 15059.3 12717.3 12981.900000000001 13526.2 12825.0 12198.2 13431.7 True False 12253.740898649552 12597.414915427396 13132.936593685672 11740.60283836834 14001.586719764657 12613.734525207368 13475.933308468262 13256.409329901377 12286.009850138871 11428.00357024217 11779.686050561544 1.0402434195659578 1.0694185618662453 1.1148800177963671 0.9966821516273483 1.1886213825789689 1.0708039646443772 1.1439976626393924 1.1253618537031753 1.0429827923600044 0.9701450039661618 1.0 13.52401346885928 -9.052970440923849 2.5426161277136177 1.0161216561699002 1.0942119181819394 0.36930670407996724 0.051625778582648316 0.21655429812464877 2.8688671371928045 0.009186145238024858 0.009072650177302681 8.851758548746657e-10 9.052970440923849 0.07809026201203917 ELSKEDLSPAFDHS(ph)PNKIMTEK ddPTM_A549_MK2206_60min_R1 2 ELSKEDLSPAFDHSPNKIMTEK 22 2 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 ELS(0.001)KEDLS(0.007)PAFDHS(0.991)PNKIMT(0.001)EK;ELS(0.001)KEDLS(0.026)PAFDHS(0.944)PNKIMT(0.029)EK 51.963 0.0023949 7185700.0 1309.52 2082.26 2173.1000000000004 1721.22 2608.3 2033.8200000000002 1613.8200000000002 1534.01 2739.7 2892.7 3535.7 True False 1530.5349613098565 2188.2381399484448 2481.2782566598057 2142.918977268503 2224.6225251941164 2249.037482459547 1907.0302043755632 1751.460615208597 2119.1623244018933 2239.237060932597 2657.688109644249 0.5758896071197496 0.8233615268878772 0.9336228158811092 0.8063094271642539 0.8370517658266148 0.8462383055025208 0.7175522957172101 0.6590166125411318 0.7973705856273552 0.8425507315199358 1.0 11.37595609316219 -10.394867018323199 0.8684986328173612 0.9937991521377609 0.7847225202380094 0.17010117205797592 0.10296775363581166 0.43811412685401346 0.6224796956843409 0.05361390466028263 0.018157235529137415 4.0284036581763504e-11 10.394867018323199 -0.20907663189975156 ELSKEDLSPAFDHS(ph)PNKIMTEK ddPTM_A549_PD325901_60min_R1 2 ELSKEDLSPAFDHSPNKIMTEK 22 2 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 ELSKEDLSPAFDHS(1)PNKIMTEK;ELS(0.006)KEDLS(0.032)PAFDHS(0.962)PNKIMT(0.001)EK 92.12100000000001 3.7753e-07 14840000.0 3525.7 3082.7 4157.9 4110.1 4588.4 4574.6 4457.200000000001 4727.2 3857.7 4585.5 5213.299999999999 True False 3883.626468516841 3342.4899477365916 4440.080097483851 4363.97154228564 4266.126613120671 4537.345974303797 4626.821185073429 4632.912287583338 3695.574284513119 4295.970747433674 4572.09714983155 0.8494190611544477 0.7310627570238176 0.9711254927396801 0.9544791808385833 0.9330787324319756 0.9923992919684497 1.0119691322053153 1.0133013660381274 0.8082886612873645 0.939606182163463 1.0 12.158640343527498 -5.766962660712206 24.999755422830713 0.9347247232254643 0.7902408993556349 0.4810229283502637 0.06357544697914973 107.7328809671714 487636.5288744374 0.011504643101288486 0.03728233604850842 1.7101623432050021e-06 5.766962660712206 -0.1444838238698294 ELSLKAS(ph)PLR ddPTM_A549_MK2206_60min_R1 3 ELSLKASPLR 10 1 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 ELS(0.008)LKAS(0.992)PLR;ELS(0.058)LKAS(0.942)PLR;ELS(0.025)LKAS(0.975)PLR 49.333 0.0081918 346618800.0 5627.2 6299.5 6613.3 5330.6 8517.6 6953.9 6786.9 7025.200000000001 8344.6 7755.7 8135.200000000001 True False 6576.933788168815 6620.117642660008 7551.165383446825 6636.597239299731 7264.672323196488 7689.757082374764 8019.991878943439 8021.043613772685 6454.561423588001 6003.681983432421 6115.00531990211 1.0755401580376875 1.0826021068393745 1.2348583506330792 1.0852970507973279 1.1880075229947276 1.2575225498737361 1.311526557931404 1.3116985503948975 1.0555283415013164 0.9817950548452716 1.0 12.578138038523997 -8.920780891919394 7.710132476237059 1.024302680861247 1.193339042068545 0.49263508475593965 0.08207384978054046 0.1636330661525505 13.734344376795216 0.015301534840101596 0.01622662068363618 1.200104621223681e-09 8.920780891919394 0.16903636120729804 ELSLKAS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 ELSLKASPLR 10 1 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 ELS(0.001)LKAS(0.999)PLR;ELS(0.001)LKAS(0.999)PLR 73.92699999999999 0.00046047 594700000.0 4918.1 4904.5 5052.0 5234.4 6552.7 4821.1 5607.4 5090.1 4728.799999999999 4843.700000000001 5379.4 True False 5417.38189148614 5317.819427344244 5394.8591001439245 5557.716999815078 6092.460957587791 4781.83856003061 5820.79267548702 4988.573962393799 4530.064980844963 4537.867955368985 4717.7679028262055 1.1482934309339015 1.1271897085396199 1.1435193954565046 1.1780395123901064 1.2913863257109508 1.0135807141267001 1.2338022546637024 1.0574013103538573 0.9602136167256559 0.9618675714527096 1.0 12.203888729590014 -8.503042796412354 4.58022616790018 0.9818767353391169 1.1599115886741433 0.6165246267048728 0.06560741414049567 0.09298399178031377 4.89534925844916 0.010282749990234251 0.012139438597839957 3.1401992359192102e-09 8.503042796412354 0.17803485333502644 ELSLT(ph)PITGAK ddPTM_A549_MK2206_60min_R1 2 ELSLTPITGAK 11 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 ELS(0.001)LT(0.987)PIT(0.012)GAK;ELS(0.001)LT(0.969)PIT(0.03)GAK 134.13 6.303600000000001e-08 4260600.0 2159.38 3199.7 2508.4 2649.3999999999996 3277.2 2832.8 2639.5 2811.6 3622.8999999999996 3606.3 4150.4 True False 2523.8305522277456 3362.5510629763044 2864.1288385281196 3298.5031189360843 2795.128221280589 3132.5650157395485 3119.0629837585943 3210.15291016388 2802.31893458248 2791.634325315873 3119.7411347873112 0.8089871701485924 1.0778301524705018 0.91806618395067 1.0573002619209175 0.8959487664258231 1.0041105593054636 0.9997826258656031 1.0289805376376948 0.8982536734649711 0.894828835055314 1.0 11.607210608925083 -5.230827764733906 23.508124029741982 0.9690439396046883 0.8089865689585016 0.359047935107346 0.06382476779895489 4623.215876430184 3550259.96602231 0.008184869131911644 1.2828539472102418 5.877223889978878e-06 5.230827764733906 -0.16005737064618664 ELSLT(ph)PITGAK ddPTM_A549_PD325901_60min_R1 2 ELSLTPITGAK 11 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 ELS(0.071)LT(0.914)PIT(0.014)GAK;ELS(0.016)LT(0.973)PIT(0.012)GAK 108.56 0.00012504 5531000.0 4218.799999999999 4403.1 3934.0 4277.4 4372.9 4644.0 4307.1 4603.4 4822.0 4558.200000000001 4721.5 True False 4647.089470283586 4774.164689680792 4200.984897063775 4541.605283319772 4065.7625896860277 4606.180803713291 4471.009047435557 4511.581575702561 4619.3481089566985 4270.3944740927245 4140.785432054491 1.1222724641343917 1.1529611393826904 1.014538175425191 1.0967980248777127 0.9818819778036072 1.1123930180144326 1.0797490284873856 1.0895472971812732 1.1155729232424303 1.031300593610794 1.0 12.015688731482147 -10.907309495106961 1.1372931394390806 0.9995846180339243 1.0856703079623813 0.23821392211386816 0.046969775189805704 0.47984856722862157 1.0936815987773918 0.03273029327521415 0.007630713841699346 1.2379140864824101e-11 10.907309495106961 0.086085689928457 ELSLT(ph)PITGAKPSATGYLGSVAAK ddPTM_A549_MK2206_60min_R1 1 ELSLTPITGAKPSATGYLGSVAAK 24 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 ELS(0.017)LT(0.964)PIT(0.019)GAKPSATGYLGSVAAK 111.79 7.6698e-12 2947900.0 1486.3 2207.5 1909.3 1851.8 2794.0 2494.4 1791.0 1866.4 3587.2 2999.2 2959.7 True False 1737.1511034538146 2319.8523210051544 2180.067449928935 2305.491083130461 2383.0063011894204 2758.3557523512854 2116.4015169204954 2130.9679156102798 2774.7049275812938 2321.6786369651354 2224.7248064355244 0.7808386450444156 1.0427592277006361 0.9799267952704047 1.0363039403621075 1.071146550034427 1.239863799950498 0.9513093533179119 0.9578568591701627 1.247212652798596 1.0435801453955789 1.0 11.119411173574823 -4.354628415999016 0.7134192792445728 1.0996564408458904 9.069698108351426e-12 0.3562295584862001 0.09978968167232681 7.3820602223913685 1.0275858052249154 0.01867507724995495 8.881122004142933 4.419484183715079e-05 4.354628415999016 -1.0996564408368208 ELSNS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 ELSNSPLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELSNS(1)PLR;ELSNS(1)PLR 157.24 0.00035827 404970000.0 17880.8 16992.5 15461.1 14610.2 23280.6 18784.5 17380.5 22684.4 22570.5 19653.6 20440.6 True False 20898.641896411886 17857.345669164242 17653.716466818336 18189.6996558768 19856.054579624346 20772.263321858052 20538.311873163962 25899.983168061422 17458.31778768221 15213.838109981987 15364.634888139326 1.360178230629126 1.162236903068172 1.1489837926735285 1.1838680052149024 1.2923219278677527 1.3519529408338318 1.3367263213666365 1.6856881635407308 1.1362663619920506 0.9901854629637997 1.0 13.907325863933675 -8.981817998680226 19.432447726781827 1.060113612516506 1.3082470852774768 0.43311218829715137 0.14103223746200996 7.980711353997705 8530.601873860174 0.026477421703625437 0.026983023202237996 1.0427543285735061e-09 8.981817998680226 0.24813347276097075 ELSNS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 ELSNSPLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELSNS(1)PLR;ELS(0.001)NS(0.999)PLR 133.89 0.0010789999999999999 428880000.0 17304.300000000003 17037.9 15349.8 15088.7 18595.9 11809.0 16133.3 15174.199999999999 13575.2 15168.7 16958.8 True False 19061.01979724764 18473.743627515254 16391.52973384583 16020.694730075986 17289.788136372314 11712.831419261474 16747.2615599805 14871.538677070386 13004.681553029654 14210.945693293472 14872.975110690602 1.281587554298178 1.2421014282634308 1.102101604544722 1.0771681261377497 1.162496945479625 0.7875244416191057 1.1260196050447682 0.9999034198867728 0.8743833332768753 0.9554877613611235 1.0 13.860405644836126 -5.865279684268879 0.5505356601718059 0.9458189292747783 1.395389669502885 0.570345295950122 0.09390998306788974 1.151076859289497 0.3433074339096207 0.017977298451576355 0.29012629905013654 1.363704632284411e-06 5.865279684268879 0.4495707402281066 ELSNS(ph)PLRENS(ph)FGSPLEFR ddPTM_A549_MK2206_60min_R1 1 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.013)NS(0.987)PLRENS(0.986)FGS(0.014)PLEFR 95.71 6.9325e-07 3122300.0 940.93 772.63 617.16 583.86 882.51 900.88 973.36 684.26 952.85 1016.1 972.4 True False 1099.7359804701593 811.9535668304471 704.6825681653697 726.9057262104716 752.6939480539282 996.2105236442537 1150.2069126240835 781.255950458364 737.030996388781 786.5623042879021 730.9262431252844 1.5045785957389126 1.1108556772550775 0.9640953171311755 0.9944994218601019 1.0297809869783439 1.3629426129025968 1.5736292456897494 1.068857436446502 1.008352078367571 1.0761172029132924 1.0 9.513582022702112 -8.509347692422997 24.565834497064042 1.0057682620233717 1.204493073525558 0.17115729933428536 0.19011687873925992 674.1989133441162 1224020.52920707 0.032847701101265274 0.038845365152645084 3.0949405243692705e-09 8.509347692422997 0.19872481150218624 ELSNS(ph)PLRENS(ph)FGSPLEFR ddPTM_A549_PD325901_60min_R1 2 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.039)NS(0.965)PLRENS(0.836)FGS(0.159)PLEFR;ELS(0.064)NS(0.936)PLRENS(0.539)FGS(0.461)PLEFR 84.318 3.029e-05 16626700.0 2458.8 3407.3 2870.4 2986.4 2770.5 2737.7 2825.8 3127.7 2629.3999999999996 2894.7 3065.6000000000004 True False 2708.4155659271087 3694.4451289203917 3065.202605117402 3170.8631453935013 2575.9096377061337 2715.4050788815402 2933.337365337094 3065.315569866815 2518.895461984805 2711.9281479874076 2688.5506344395317 1.0073887139163804 1.3741400595531479 1.140094802698923 1.17939498880017 0.9581034497582078 1.009988446599447 1.0910478410790994 1.1401368196682022 0.9368971629987196 1.008695210441052 1.0 11.392612927325093 -6.753082752442077 24.016588945615748 0.9942913785234104 1.186949420121445 0.3447501382552487 0.09782063347371212 76.9029540574666 221012.41795474853 0.013678858100711608 0.02808124949792696 1.765701343880748e-07 6.753082752442077 0.19265804159803457 ELSNS(ph)PLRENSFGS(ph)PLEFR ddPTM_A549_MK2206_60min_R1 2 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.022)NS(0.978)PLRENS(0.049)FGS(0.951)PLEFR;ELS(0.039)NS(0.961)PLRENS(0.004)FGS(0.996)PLEFR 136.77 1.8402e-17 84756000.0 5538.8 6754.4 5975.2 5388.5 8072.1 7117.9 5908.8 7304.099999999999 9967.7 8302.4 9151.4 True False 6473.614029341313 7098.170109625006 6822.573208409033 6708.682741898959 6884.704783046207 7871.1114535203715 6982.352475253949 8339.478542868112 7710.031865146098 6426.882073732773 6878.854814208893 0.9410889172961582 1.0318825300634487 0.991818172163831 0.9752615694172774 1.000850427723119 1.144247358915307 1.0150457690764563 1.212335304074476 1.1208307303157983 0.934295351089177 1.0 12.74795269095884 -7.0682951099266065 11.379779679843347 1.0732677271632491 0.9887452323523167 0.2423241883717817 0.07325838510252987 0.9677147033629229 159.67866864453757 0.010171625196605758 0.017628980117982414 8.544858789787456e-08 7.0682951099266065 -0.08452249481093244 ELSNS(ph)PLRENSFGS(ph)PLEFR ddPTM_A549_PD325901_60min_R1 4 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.028)NS(0.972)PLRENS(0.024)FGS(0.976)PLEFR;ELS(0.049)NS(0.527)PLRENS(0.499)FGS(0.925)PLEFR;ELS(0.042)NS(0.946)PLRENS(0.127)FGS(0.885)PLEFR;ELS(0.035)NS(0.965)PLRENS(0.286)FGS(0.714)PLEFR 97.346 4.4263000000000004e-07 429457000.0 5350.6900000000005 4942.82 5085.5199999999995 5525.799999999999 6314.300000000001 5085.820000000001 5684.2300000000005 5381.6900000000005 5291.6900000000005 5465.61 6043.3 True False 5893.888109830213 5359.3687882282975 5430.653968916054 5867.116115997664 5870.805351152437 5044.402768118246 5900.546483180007 5274.347971095868 5069.298671647667 5120.510451833161 5300.012411635053 1.1120517561225767 1.0111992901116498 1.0246492927062218 1.1070004483607727 1.107696528835353 0.9517718783156678 1.113308050039017 0.995157664068325 0.9564692076039478 0.9661317850109495 1.0 12.371780022863089 -8.453174033690708 8.539622730396978 0.9792491048634715 1.0570506546285927 0.391363679028516 0.04918304035509607 0.29657857143652877 34.16314761344498 0.007788273916380457 0.009407892107560442 3.52229694674383e-09 8.453174033690708 0.07780154976512121 ELSNS(ph)PLRENSFGSPLEFR ddPTM_A549_MK2206_60min_R1 7 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.015)NS(0.985)PLRENSFGSPLEFR;ELS(0.002)NS(0.998)PLRENSFGSPLEFR;ELS(0.002)NS(0.998)PLRENSFGSPLEFR;ELS(0.003)NS(0.997)PLRENSFGSPLEFR;ELS(0.027)NS(0.973)PLRENSFGSPLEFR;ELS(0.005)NS(0.995)PLRENSFGSPLEFR;ELS(0.125)NS(0.874)PLRENS(0.001)FGSPLEFR 178.35 3.0673e-35 1031285400.0 10405.419999999998 12056.610000000002 11410.199999999999 9540.8 14976.21 12542.74 11671.73 12231.0 17841.21 15894.130000000001 16749.4 True False 12161.600507905805 12670.239951055011 13028.337933891546 11878.296428302781 12773.229347865423 13870.00442160302 13792.332259679759 13964.781705866546 13800.20442155794 12303.634994047314 12590.061720076757 0.9659682993064517 1.0063683747356376 1.0348112839761452 0.9434660998810706 1.0145485885503307 1.1016629409755156 1.0954936176115642 1.109190885347098 1.0961188855453685 0.9772497758630767 1.0 13.619997735126665 -7.011424129228328 23.994868518276196 1.0594015692394234 0.9906897808132137 0.3849556327260827 0.0449515025868828 311.0388850101893 653299.6535781573 0.007139592022401059 0.01285311256558428 9.740379338290616e-08 7.011424129228328 -0.06871178842620973 ELSNS(ph)PLRENSFGSPLEFR ddPTM_A549_PD325901_60min_R1 6 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.034)NS(0.966)PLRENSFGSPLEFR;ELS(0.017)NS(0.983)PLRENSFGSPLEFR;ELSNS(1)PLRENSFGSPLEFR;ELSNS(1)PLRENSFGSPLEFR;ELS(0.04)NS(0.959)PLRENSFGSPLEFR;ELS(0.023)NS(0.977)PLRENSFGSPLEFR 210.16 1.1618999999999998e-66 1757780600.0 17626.5 19054.899999999998 18760.0 19647.7 22167.0 19704.1 20770.1 21811.4 19651.5 20988.7 23458.300000000003 True False 19415.929304056528 20660.723296177362 20033.16641304434 20861.293805835765 20610.0663919985 19543.636342473532 21560.517521334823 21376.354516287727 18825.61579493209 19663.469900046057 20573.07781441572 0.9437542345001793 1.0042602027053156 0.9737564108665812 1.0140093764297187 1.0017979117133784 0.9499617178708745 1.0479966933400309 1.0390450427066944 0.9150607393192687 0.9557864932716925 1.0 14.328470022485263 -8.758668336069906 24.999605442683688 0.9598897955269282 0.9971842314259272 0.19781568936803517 0.03562122045109208 106.26323594728392 958676.6961194433 0.007125848128984339 0.007901389974442981 1.7431375722180755e-09 8.758668336069906 0.037294435898998946 ELSNSVSTYRPFGLGS(ph)ESPYKQPSDGMER ddPTM_A549_PD325901_60min_R1 2 ELSNSVSTYRPFGLGSESPYKQPSDGMER 29 2 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELS(0.006)NS(0.01)VS(0.01)T(0.009)YRPFGLGS(0.481)ES(0.481)PY(0.004)KQPS(0.001)DGMER;ELS(0.068)NS(0.068)VS(0.061)T(0.061)YRPFGLGS(0.371)ES(0.371)PYKQPSDGMER 54.681000000000004 0.0015360999999999999 20599800.0 4441.6 4482.3 4303.3 4277.200000000001 6316.799999999999 4521.4 5345.6 4849.2 5019.1 4914.6 5045.4 True False 4892.507962266898 4860.039151633218 4595.347815845078 4541.392929774003 5873.129759776973 4484.579217465394 5549.029733224561 4752.47890187619 4808.16468139041 4604.291317269116 4424.847785425758 1.1056895512612852 1.0983517145247035 1.0385324057882626 1.0263387917505578 1.3273066203817137 1.0134990930617715 1.2540611569739306 1.0740434772761134 1.0866282671298193 1.0405536055803764 1.0 12.111412112063718 -9.90361163324754 0.7548721623795178 1.0071119439526128 1.1173506796375858 0.1369483120017032 0.09136772004624599 0.7322741756510136 0.8572823223869203 0.03867276304864215 0.018269610261860098 1.2484994827272898e-10 9.90361163324754 0.110238735684973 ELSNSVSTYRPFGLGS(ph)ESPYKQPSDGMERPSSLMDSSQEK ddPTM_A549_MK2206_60min_R1 3 ELSNSVSTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEK 40 3 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELS(0.093)NS(0.093)VS(0.082)T(0.082)Y(0.001)RPFGLGS(0.323)ES(0.323)PY(0.004)KQPSDGMERPSSLMDSSQEK;ELS(0.074)NS(0.074)VS(0.068)T(0.068)Y(0.003)RPFGLGS(0.34)ES(0.34)PY(0.014)KQPS(0.017)DGMERPSSLMDSSQEK;ELS(0.034)NS(0.034)VS(0.034)T(0.034)Y(0.02)RPFGLGS(0.389)ES(0.389)PY(0.02)KQPS(0.039)DGMERPS(0.002)S(0.002)LMDSSQEK 66.90100000000001 4.679e-05 45344000.0 3192.17 3032.35 2969.67 2574.8599999999997 3341.9 3288.35 3685.4700000000003 2609.9 4154.2 4113.599999999999 4183.7 True False 3730.930254936532 3186.683662785945 3390.8138605931276 3205.700815589859 2850.310936988161 3636.3210143699307 4355.072193503616 2979.861317483534 3213.280332894239 3184.3349029807205 3144.771825754063 1.186391401876007 1.0133274651879816 1.0782384377855676 1.0193746933678365 0.9063649431241978 1.1563067897614487 1.3848611075175046 0.9475604217387105 1.0217848896314596 1.01258058753346 1.0 11.618739628381881 ELSNSVSTYRPFGLGS(ph)ESPYKQPSDGMERPSSLMDSSQEK ddPTM_A549_PD325901_60min_R1 5 ELSNSVSTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEK 40 3 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELS(0.08)NS(0.077)VS(0.072)T(0.067)Y(0.013)RPFGLGS(0.311)ES(0.311)PY(0.063)KQPS(0.003)DGMERPSSLMDSSQEK;ELS(0.09)NS(0.09)VS(0.09)T(0.1)Y(0.018)RPFGLGS(0.315)ES(0.282)PY(0.015)KQPSDGMERPSSLMDSSQEK;ELS(0.082)NS(0.076)VS(0.07)T(0.07)Y(0.001)RPFGLGS(0.35)ES(0.35)PY(0.001)KQPS(0.001)DGMERPSSLMDSSQEK;ELS(0.112)NS(0.112)VS(0.086)T(0.086)Y(0.001)RPFGLGS(0.299)ES(0.299)PY(0.004)KQPSDGMERPSSLMDSSQEK;ELS(0.079)NS(0.076)VS(0.066)T(0.066)Y(0.019)RPFGLGS(0.33)ES(0.33)PY(0.025)KQPS(0.004)DGMERPS(0.001)S(0.001)LMDSSQEK 66.014 4.7688e-05 154090000.0 7685.0 7659.8 8302.8 8210.9 9642.7 8794.8 8939.0 8780.61 9733.8 10178.599999999999 9122.9 True False 8465.175542602012 8305.318228070435 8866.277936792354 8718.068644693109 8965.430017509087 8723.178064706652 9279.178536608486 8605.473845294708 9324.722236201309 9535.921458909257 8000.841134827895 1.0580356989908042 1.0380556354152743 1.1081682272376572 1.0896440133954293 1.1205609343350549 1.0902826237524457 1.1597753761433847 1.075571143118294 1.1654677400867917 1.1918648674823842 1.0 12.965935964318902 -5.755349148822136 24.977427469735623 1.090771006360108 1.0480456565987764 0.08320029187538136 0.05259001025272548 319.7891877015568 1311489.2301518004 0.00837889122878873 0.030881767012970077 1.7565109082268276e-06 5.755349148822136 -0.04272534976133158 ELSNSVSTYRPFGLGSES(ph)PYK ddPTM_A549_MK2206_60min_R1 1 ELSNSVSTYRPFGLGSESPYK 21 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELSNSVSTYRPFGLGS(0.004)ES(0.994)PY(0.001)K 95.12299999999999 3.8957999999999997e-07 4432700.0 1342.9 1855.5 1779.5 2024.3 2359.3 2024.3 1973.8 1954.0 2815.4 2469.6 1895.1 True False 1569.54868924721 1949.937024518715 2031.859858140961 2520.253590874279 2012.250095345812 2238.5100823784105 2332.4139107189667 2230.9854838740275 2177.7163952699534 1911.7156447883092 1424.4943679007874 1.101828638017139 1.3688625721927201 1.426372686285324 1.7692267850719985 1.4126065646094295 1.5714418623340722 1.6373626763832974 1.5661595680169162 1.5287644825715634 1.3420310307056655 1.0 10.476234202274945 -10.621266241011549 0.8586933813174185 0.994098993886095 1.496924417943883 0.22725705923638906 0.18942157845059543 0.37415099232890486 0.483521786882507 0.11925912708622849 0.030926596600025214 2.3918490015664737e-11 10.621266241011549 0.502825424057788 ELSNSVSTYRPFGLGSES(ph)PYK ddPTM_A549_PD325901_60min_R1 2 ELSNSVSTYRPFGLGSESPYK 21 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELSNSVSTYRPFGLGS(0.007)ES(0.993)PYK;ELSNSVSTYRPFGLGS(0.219)ES(0.781)PYK 134.68 2.9562e-18 13648400.0 6336.8 6939.8 6511.799999999999 7194.200000000001 8055.6 7074.299999999999 6359.1 7296.7 7688.2 7055.4 7963.7 True False 6980.107271094399 7524.641301230223 6953.72990663444 7638.569394786341 7489.802446311325 7016.689246276688 6601.099030333041 7151.161594349587 7365.0916904356845 6609.920839917906 6984.215386053659 0.9994118000760024 1.0773781857094078 0.9956350888776865 1.0936904108139793 1.072389958257479 1.0046496074974827 0.9451453979375207 1.0239033590844424 1.0545338714986616 0.9464085046857005 1.0 12.769882335553845 -7.2731393183387585 24.60356066631493 1.0181615320862014 1.0490122239358688 0.17117561989338292 0.04369812757714557 1033.0795765546227 2172437.4030489153 0.006080588564588195 0.009768631953401802 5.331638331830286e-08 7.2731393183387585 0.030850691849667378 ELSNSVSTYRPFGLGSES(ph)PYKQPSDGMER ddPTM_A549_PD325901_60min_R1 1 ELSNSVSTYRPFGLGSESPYKQPSDGMER 29 2 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELS(0.001)NS(0.003)VS(0.029)T(0.026)Y(0.002)RPFGLGS(0.079)ES(0.846)PY(0.01)KQPS(0.004)DGMER 54.011 0.0023399000000000002 17294000.0 2161.6 2096.6 2469.6 2479.0 2558.4 2416.6 2652.8 1925.8 2299.7 2612.8 2773.7 True False 2381.0440407141846 2273.2878400183386 2637.201906911208 2632.122199782513 2378.706810000854 2396.9200108211753 2753.7537556678612 1887.3884082391266 2203.051606422173 2447.827362096764 2432.552483932974 0.9788253517410197 0.934527766629259 1.0841294994989603 1.0820412785202778 0.9778645376460442 0.9853518173411873 1.132042894801417 0.7758880520380711 0.905654295631171 1.0062793622191835 1.0 11.248255217106495 -8.232821459481677 24.988328920699676 0.9407359960906655 1.022625532577898 0.27155492160538697 0.07895420470324836 921.2939537211201 804448.2144656534 0.012970154090803862 0.0167429760455479 5.8503054354124185e-09 8.232821459481677 0.0818895364872324 ELSNSVSTYRPFGLGSES(ph)PYKQPSDGMERPSSLMDSSQEK ddPTM_A549_MK2206_60min_R1 3 ELSNSVSTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEK 40 3 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELS(0.035)NS(0.032)VS(0.03)T(0.03)Y(0.006)RPFGLGS(0.139)ES(0.688)PY(0.028)KQPS(0.006)DGMERPS(0.002)S(0.002)LMDSSQEK;ELS(0.012)NS(0.012)VS(0.049)T(0.041)YRPFGLGS(0.2)ES(0.685)PYKQPSDGMERPSSLMDSSQEK;ELS(0.001)NS(0.002)VS(0.005)T(0.006)YRPFGLGS(0.223)ES(0.722)PY(0.039)KQPS(0.001)DGMERPSSLMDSSQEK 111.82 8.9531e-16 69726000.0 3853.5 4881.41 4983.1 4521.4 5728.7 4171.3 3659.0 5145.0 6061.1 5831.1 6406.8 True False 4503.876590970382 5129.852918812123 5689.778510313139 5629.143202973361 4886.015818763002 4612.704197315156 4323.7929371368455 5874.319505901677 4688.27052758781 4513.850460125171 4815.814741315378 0.9352262977084964 1.0652097712153623 1.1814778632367093 1.1688869911627524 1.0145771964285424 0.9578242613326224 0.8978320739879326 1.219797650334278 0.9735155481307548 0.9372973634970581 1.0 12.233564179059051 -6.947585307276649 12.278474049231072 0.9967936545171489 1.0927221403917824 0.15851631619026885 0.09740980618776551 1.1556072965943265 268.1667268159753 0.013571020295392327 0.025651799964411817 1.1282742919281744e-07 6.947585307276649 0.09592848587463354 ELSNSVSTYRPFGLGSES(ph)PYKQPSDGMERPSSLMDSSQEK ddPTM_A549_PD325901_60min_R1 4 ELSNSVSTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEK 40 3 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELS(0.036)NS(0.054)VS(0.04)T(0.034)Y(0.002)RPFGLGS(0.156)ES(0.676)PY(0.001)KQPSDGMERPSSLMDSSQEK;ELS(0.028)NS(0.028)VS(0.046)T(0.046)Y(0.032)RPFGLGS(0.175)ES(0.511)PY(0.094)KQPS(0.028)DGMERPS(0.008)S(0.004)LMDSSQEK;ELS(0.007)NS(0.006)VS(0.012)T(0.012)Y(0.007)RPFGLGS(0.135)ES(0.433)PY(0.384)KQPS(0.003)DGMERPSSLMDSSQEK;ELSNSVSTYRPFGLGS(0.015)ES(0.964)PY(0.02)KQPS(0.001)DGMERPSSLMDSSQEK 103.39 5.212399999999999e-15 96916000.0 8903.1 9085.7 9370.199999999999 9151.9 11264.3 9500.300000000001 9986.699999999999 9203.8 10652.1 10147.6 9605.0 True False 9806.936157884184 9851.38382526692 10006.118119589983 9717.192077527057 10473.13442772539 9422.932706614425 10366.74933343193 9020.22298875858 10204.429280675582 9506.878804199749 8423.645891111588 1.1642151491947457 1.1694916847895807 1.1878607255022648 1.1535613204942987 1.243301839026302 1.118628777659951 1.2306724982789998 1.0708217208271402 1.2114029260706496 1.128594307867471 1.0 13.040229075029163 -10.882310138305318 0.8236365296694356 0.9844303924385783 1.1748742567760457 0.23247711255727554 0.05974046809358575 0.3469695647428747 0.35837494743890935 0.044888049307059225 0.0078009750285606754 1.3112631655489021e-11 10.882310138305318 0.1904438643374674 ELSPS(ph)SLK ddPTM_A549_MK2206_60min_R1 2 ELSPSSLK 8 0 H7C1I9;O15021-2;O15021-3;O15021-6;O15021 H7C1I9 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 ELS(0.308)PS(0.571)S(0.122)LK;ELS(0.359)PS(0.528)S(0.113)LK 61.78 0.010672 6545900.0 3205.5 3490.0 3301.1 3321.6000000000004 4475.3 3823.6000000000004 3498.1 3562.8 5962.799999999999 5383.1 5507.2 True False 3746.5100330493206 3667.6260930047497 3769.2456182686865 4135.392149112289 3816.98929839406 4228.210814099735 4133.659489860179 4067.8378106173927 4612.235320634965 4167.053971274681 4139.610249012305 0.9050393171538851 0.885983431382177 0.9105315214561598 0.998981039362094 0.9220648971252254 1.021403117626489 0.9985624832305057 0.9826620299792628 1.1141713937285345 1.0066295425442346 1.0 12.015279226713586 -7.030186712892264 0.6817767081644295 1.0499377031360366 0.8921844657390611 0.5619399190113572 0.04189443108054869 0.4336218143710066 0.3691693794417871 0.009708194328875862 0.03371723931583953 9.328531601764379e-08 7.030186712892264 -0.15775323739697555 ELST(ph)LRR ddPTM_A549_PD325901_60min_R1 1 ELSTLRR 7 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2;A0A0D9SFF6 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 ELS(0.175)T(0.825)LRR 45.972 0.040895 3976200.0 476.61 493.04 512.16 543.0 551.78 625.03 516.73 480.46 609.35 670.78 543.35 True False 524.9950963382626 534.5902111240305 546.9182574682719 576.5398767575248 513.0248763376609 619.9399629080357 536.3944429155059 470.87684838642144 583.7411385717053 628.426836323969 476.5213945794361 1.101724082717436 1.1218598308599432 1.1477307497409766 1.2098929519552046 1.0766040773267729 1.300969840934795 1.1256460864446853 0.9881546846432858 1.2250050999009146 1.3187798983896626 1.0 8.89639717864393 -11.011109236718088 1.2412749652388946 0.9984426813868661 1.151828137661131 0.0 0.12240146010954875 0.4406750390162975 1.1882619510427548 0.05824113396546136 0.012644957497503226 9.747444324952089e-12 11.011109236718088 0.15338545627426492 ELST(ph)PDKVLIPER ddPTM_A549_MK2206_60min_R1 1 ELSTPDKVLIPER 13 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 ELS(0.19)T(0.81)PDKVLIPER 49.595 0.011897 3748600.0 731.49 455.45 552.04 610.09 971.16 799.09 970.56 791.5 1222.6 1076.1 1407.8 True False 854.9476287865381 478.63045961576296 630.3275729632685 759.5620773879807 828.3036504878729 883.6491734069879 1146.8981888678695 903.6975488670895 945.6830520910156 833.0082626160923 1058.2044066966012 0.8079229526698247 0.45230435309743666 0.5956576715938685 0.7177838918277681 0.7827444728505621 0.8350458265104729 1.0838153589325374 0.8539914813699973 0.8936676563681646 0.7871903172436183 1.0 10.047402615369245 -6.967499862591469 1.3321662745176606 0.9484018153363578 0.6064215219456899 0.5593202097586056 0.1102469310361482 0.17636325819683352 0.6206275489714667 0.015115337779436452 0.03608239209924481 1.077705594674753e-07 6.967499862591469 -0.34198029339066793 ELST(ph)PDKVLIPER ddPTM_A549_PD325901_60min_R1 2 ELSTPDKVLIPER 13 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 ELS(0.239)T(0.761)PDKVLIPER;ELS(0.153)T(0.847)PDKVLIPER 95.06700000000001 6.757e-05 12181100.0 2181.7 2482.3999999999996 2074.0 2297.2 2611.8 2266.1 2261.9 2051.9 2311.2 2276.8999999999996 2869.3 True False 2403.1845779173464 2691.6005599835557 2214.7541119751572 2439.092826680267 2428.356178220855 2247.6456329230605 2347.977842259174 2010.973244815589 2214.0683014144993 2133.136145421816 2516.394289991307 0.9550111393416206 1.0696259209811092 0.880130002195645 0.9692808620578667 0.9650141823478879 0.8932008953695508 0.9330723136664268 0.7991487076623974 0.8798574651916525 0.8476955117511354 1.0 11.297142278281296 -7.119316170316249 8.312744953340065 0.9259741813908711 0.96913072212139 0.15116649869345833 0.06685422401388628 0.6704807610880952 43.36319236336359 0.010699522967851992 0.018573080583459835 7.597729539607714e-08 7.119316170316249 0.04315654073051889 ELSTS(ph)PCNPIVR ddPTM_A549_PD325901_60min_R1 1 ELSTSPCNPIVR 12 0 H3BSS6;Q9H2Y7;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 ELS(0.005)T(0.117)S(0.877)PCNPIVR 63.555 0.006952 10157000.0 9739.8 9520.2 10548.0 8669.0 11130.0 10312.0 9531.8 10974.0 8243.0 10025.0 10517.0 True False 10728.577325938197 10322.500665144807 11263.850710276742 9204.464441272521 10348.267196415543 10228.022490932708 9894.537865001097 10755.11496106355 7896.575375804656 9392.019789122796 9223.475672755922 1.1631816146735237 1.119155189581641 1.2212154192098787 0.9979388213122787 1.12194877111044 1.108911960503565 1.0727558911688078 1.1660587985103865 0.856138797994488 1.018273384388568 1.0 13.171094787047345 -8.756109119217603 24.99998628920945 0.9320655412284589 1.1185141902208242 0.5317618338415779 0.06698145241253534 64.93534509680984 304559.366234557 0.01201161586805067 0.013426491019088896 1.7534398837009735e-09 8.756109119217603 0.18644864899236535 ELT(ph)DEEAER ddPTM_A549_PD325901_60min_R1 2 ELTDEEAER 9 0 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 ELT(1)DEEAER;ELT(1)DEEAER 147.3 3.0173e-05 40072000.0 4852.2 5150.6 5077.6 3996.7 6806.3 3817.1 4342.8 4206.299999999999 4550.9 5539.4 6040.9 True False 5344.791771999155 5584.659138032275 5422.196470089225 4243.567081835724 6328.248968460297 3786.0148031554704 4508.067630471343 4122.402046721485 4359.64149918105 5189.641338640083 5297.907596420198 1.0088495646112507 1.0541254328040441 1.0234599927248653 0.8009892593640378 1.1944808121486115 0.7146245445491886 0.8509147334916618 0.7781189029244293 0.8228987425388212 0.9795643363328437 1.0 12.37120696578961 -6.138232405975881 8.41750813006011 0.899469796548924 1.033104428832594 0.1894966324039914 0.12483169262506509 0.400369487489256 25.777284934552757 0.01742923477428582 0.04632666950001074 7.273904486173056e-07 6.138232405975881 0.1336346322836699 ELT(ph)DEEAERLQLEIDQK ddPTM_A549_PD325901_60min_R1 1 ELTDEEAERLQLEIDQK 17 1 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 ELT(1)DEEAERLQLEIDQK 105.67 4.5495000000000005e-09 2939200.0 1521.1 1652.9 1245.0 1515.7 1542.5 1486.3 1344.4 1628.8 1467.0 1560.0 1718.7 True False 1675.520952225364 1792.1956838530546 1329.4931867931873 1609.321346595543 1434.1601213361168 1474.1960655811938 1395.561877683909 1596.3123062311197 1405.3470916299195 1461.5013337687342 1507.3107957369596 1.111596199645185 1.1890020883031014 0.8820298975853662 1.0676771845243158 0.951469415194444 0.978030589146298 0.9258620595240851 1.0590465554588198 0.9323538951652054 0.9696084828040868 1.0 10.557761204742267 -5.750990964299053 24.999846134407445 0.9726133823764006 1.1502992058404053 0.6081891303327387 0.05456526705921987 93.05597209716186 222649.8181292089 0.00683726422889461 0.02590979608353909 1.7742263941207241e-06 5.750990964299053 0.17768582346400474 ELTIGS(ph)KLQDAEIAR ddPTM_A549_MK2206_60min_R1 2 ELTIGSKLQDAEIAR 15 1 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 1 ELT(0.002)IGS(0.998)KLQDAEIAR;ELT(0.002)IGS(0.998)KLQDAEIAR 108.71 9.959299999999998e-07 12228100.0 2385.13 2675.8999999999996 2794.4 2955.2 3628.1 2656.0 2837.5 2786.1000000000004 3971.6000000000004 3532.0 4107.4 True False 2787.681633170155 2812.091880306993 3190.687939077888 3679.2241326639682 3094.4112961150076 2937.05615708989 3353.0370208050817 3181.0382070734036 3072.0389413419566 2734.1187469194647 3087.4192215269363 0.9029164597192145 0.9108228194926585 1.033448233019641 1.1916827190200443 1.0022646987941641 0.9512981381379488 1.0860323073154865 1.0303227319742365 0.995018402399732 0.8855677025834086 1.0 11.592185675536882 -5.754875458479695 23.893387790423528 1.0176179737002475 0.9068695174709265 0.2622693792527402 0.07281032244050241 78.25105137270128 284827.18705496745 0.008596412800127106 0.03171491669825702 1.7584278015162786e-06 5.754875458479695 -0.11074845622932106 ELTIGS(ph)KLQDAEIAR ddPTM_A549_PD325901_60min_R1 2 ELTIGSKLQDAEIAR 15 1 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 1 ELT(0.001)IGS(0.999)KLQDAEIAR;ELT(0.035)IGS(0.965)KLQDAEIAR 106.86 1.2443e-06 21665000.0 2934.9 2933.7 3860.6 3219.0 3257.0 3300.2 3720.3 3377.6 2856.2 3801.2 4084.7 True False 3232.8488874408126 3180.933194821047 4122.60353167372 3417.8303191205746 3028.2395560400214 3273.324265377821 3861.8780523262726 3310.231118324057 2736.1638467030525 3561.1915832831514 3582.3077950466977 0.9024486650507568 0.8879564171507996 1.1508233707260151 0.9540861686554271 0.845332039928899 0.9137473530063185 1.0780419420313743 0.9240498884269954 0.7637992052180387 0.9941054166834173 1.0 11.806673584942455 -8.522621806243405 24.999616388601336 0.8861167295627189 0.9625480399076288 0.009131601477715523 0.10168915210660293 18.582058089699668 1808066.8946601793 0.01955541861808226 0.02229272479770042 3.0017753971207296e-09 8.522621806243405 0.07643131034490991 ELTIGSK ddPTM_A549_PD325901_60min_R1 2 ELTIGSK 7 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ; 123.69 0.017238 136841000.0 26082.0 24046.0 24419.0 24242.0 27095.0 22745.3 24939.0 23910.0 23734.0 25105.0 26885.0 False True 28729.825439446424 26072.44080944434 26076.220183375786 25739.37328242342 25191.94067267557 22560.06981798019 25888.067292144453 23433.096292967854 22736.54251720826 23519.86601555389 23578.315438056772 1.2184850743439803 1.1057804735007448 1.105940763744608 1.0916544631886032 1.0684368329390619 0.9568143185312945 1.0979608513659804 0.9938409872634698 0.9642988523476177 0.9975210518047213 1.0 14.525173027639106 -4.418844996245349 0.3394945045032311 0.980827743585826 1.5300623734387016 0.7358061181299569 0.038962093598661256 3.7714115297420534 0.19394959641204074 0.011345661495890608 0.9563127935239283 3.8120185361710614e-05 4.418844996245349 0.5492346298528755 ELTLQPGALT(ph)NSGKR ddPTM_A549_MK2206_60min_R1 1 ELTLQPGALTNSGKR 15 1 Q96R06;J3KSV2;J3QRV8;F5GZT2 Q96R06 SPAG5 Sperm-associated antigen 5 1 ELTLQPGALT(0.5)NS(0.5)GKR 45.70399999999999 0.024663 3969100.0 1653.7 1315.6 1481.5 1163.9 1816.3 1912.6 1345.2 1521.1 1975.2 1886.9 2689.2 True False 1932.804130916755 1382.5584206180652 1691.5989771485436 1449.0555522494574 1549.1246760380614 2114.9900625188693 1589.6054274491614 1736.7205831733802 1527.8203537462578 1460.6479794910354 2021.3974218557316 0.9561722549058937 0.683961701776 0.8368463117933441 0.7168583162232198 0.7663632392564828 1.046300959747547 0.786389361271587 0.8591682983245296 0.7558238361378988 0.7225931742557069 1.0 10.981137278904932 -10.904136195548409 1.0759322203743924 1.0033450697765727 0.8160171275181063 0.0 0.1285762683353406 0.5056729105701757 1.0085888420499833 0.07342044484473441 0.016244838198175203 1.2469923938095656e-11 10.904136195548409 -0.18732794225846638 ELTLQPGALT(ph)NSGKR ddPTM_A549_PD325901_60min_R1 1 ELTLQPGALTNSGKR 15 1 Q96R06;J3KSV2;J3QRV8;F5GZT2 Q96R06 SPAG5 Sperm-associated antigen 5 1 ELTLQPGALT(0.56)NS(0.44)GKR 52.611999999999995 0.011918000000000002 4182000.0 1819.0 2026.9 2166.8 2002.3 2059.8 2445.1 2238.6 2128.3 2082.5 2028.8 2627.7 True False 2003.6635409229739 2197.713976406168 2313.85207802689 2125.9775234467625 1915.1267539242342 2425.1879162703203 2323.7911480089247 2085.8493868809505 1994.9797670888265 1900.7012217628248 2304.509558362719 0.8694533436201121 0.9536579999987391 1.0040540164523373 0.9225292712420782 0.831034415533026 1.0523661780744964 1.0083668950628717 0.9051163963767113 0.8656851779370343 0.8247747182759411 1.0 11.170244036182991 -7.235063569244176 24.99353058687907 0.9456951245927171 0.9234682740373583 0.02613183464578228 0.07372766424039548 3388.0482951593494 3210491.601881781 0.011070520645099823 0.01917145913035697 5.820180194663437e-08 7.235063569244176 -0.02222685055535878 ELTLQPGALTNS(ph)GKR ddPTM_A549_PD325901_60min_R1 1 ELTLQPGALTNSGKR 15 1 Q96R06;J3KSV2;J3QRV8;F5GZT2 Q96R06 SPAG5 Sperm-associated antigen 5 1 ELTLQPGALT(0.182)NS(0.818)GKR 87.676 1.6278e-05 5282600.0 1862.1 1995.0 1891.2 1613.4 2254.0 2183.9 1851.7 1787.6 2201.2 2251.4 2135.4 True False 2051.1390211944313 2163.1256514531096 2019.548204709458 1713.056053702745 2095.686815877865 2166.115042469737 1922.1674567891187 1751.944915654928 2108.691218879194 2109.2462197736727 1872.7593374158976 1.0952496565974508 1.1550473188070551 1.0783810628311192 0.9147230076377475 1.1190369066692631 1.15664356823265 1.0263825246448357 0.9354885492507149 1.125980886465019 1.1262772410917936 1.0 10.870949799819854 ELTPAS(ph)PTCTNSVSK ddPTM_A549_MK2206_60min_R1 2 ELTPASPTCTNSVSK 15 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 ELTPAS(0.982)PT(0.018)CTNSVSK;ELTPAS(0.996)PT(0.003)CTNSVSK 248.81 1.7067999999999996e-76 41746000.0 7827.1 7630.2 7944.7 7814.0 10936.599999999999 8163.8 7857.1 8076.5 11746.4 11250.9 10875.6 True False 9148.12312577767 8018.544588780752 9071.377923558583 9728.430350783789 9327.840627626414 9027.687897308142 9284.633366050259 9221.368608243909 9085.85915514633 8709.31387591059 8174.888368709729 1.119051748864621 0.980875117447793 1.1096638283502762 1.1900383114735131 1.1410358413369577 1.104319409652442 1.135750477228313 1.1280115632575114 1.111435257015061 1.065374043423814 1.0 12.996983314843636 -10.512916363265544 0.7802133159015728 0.9982164156105944 1.1133336365541013 0.23770063470525238 0.051201787851869116 0.5371054773234346 0.5753466049061414 0.0364423440257581 0.009806448884274463 3.069613079702372e-11 10.512916363265544 0.11511722094350696 ELTPAS(ph)PTCTNSVSK ddPTM_A549_PD325901_60min_R1 4 ELTPASPTCTNSVSK 15 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 ELTPAS(0.996)PT(0.004)CTNSVSK;ELTPAS(0.993)PT(0.007)CTNSVSK;ELT(0.003)PAS(0.996)PTCTNSVSK;ELTPAS(0.984)PT(0.015)CT(0.001)NSVSK 222.45 5.7141e-54 60281000.0 16667.100000000002 18844.6 18122.4 17031.3 18859.300000000003 15993.5 18775.5 17988.1 18438.800000000003 18630.6 23450.6 True False 18359.13172232949 20432.700577129453 19352.295042844074 18083.284720111285 17534.687829052982 15863.25423862803 19490.011926847823 17629.313234108547 17663.88135865425 17454.26073648191 20566.324865601397 0.8926792629361024 0.9935027629221476 0.9409700162430152 0.8792667060490147 0.8525921837586531 0.7713217768508763 0.9476662483070185 0.8571931713280867 0.8588739832753646 0.8486815632128504 1.0 14.327996391600095 -10.823435584381926 1.044069561353511 1.0006755308447015 0.8872902434101768 0.0 0.07110890846607394 0.500254933072034 0.9586887259661163 0.04191962052400323 0.01011696060209122 1.501635115424522e-11 10.823435584381926 -0.1133852874345247 ELTVDPTAAGDVRPIMHHPPNQIDDLET(ph)QWGVGSSPQRDDLK ddPTM_A549_PD325901_60min_R1 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 42 2 O00139-1;O00139-5;O00139;O00139-4;O00139-2;H0Y8H2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.468)QWGVGS(0.266)S(0.266)PQRDDLK 117.6 2.9499e-22 15300000.0 1921.6 2000.0 1652.8 1254.8 1995.1 1378.8 1671.9 1549.9 2300.9 1991.2 2667.2 True False 2116.6794173928465 2168.5470190006104 1764.9689470937983 1332.3061461424345 1854.9710587213524 1367.5715099396834 1735.5250693987855 1518.9860286269725 2204.201174595286 1865.4752921796824 2339.1513087738504 0.9048920475787346 0.927065731432881 0.7545338946111056 0.5695681767763926 0.793010290426104 0.584644313007928 0.7419464755824294 0.6493748493008787 0.9423080782878883 0.797500907779043 1.0 11.191769470575329 -8.859295505596998 6.029716607811173 0.9746243423486181 0.7385376950119963 0.2546437454993934 0.12024833271768659 0.13217218845014025 6.8609857073056 0.019652145113233942 0.02085127995440933 1.38262528356167e-09 8.859295505596998 -0.23608664733662177 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(ph)SPQRDDLK ddPTM_A549_MK2206_60min_R1 2 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 42 2 O00139-1;O00139-5;O00139;O00139-4;O00139-2;H0Y8H2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.031)QWGVGS(0.484)S(0.484)PQRDDLK;ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.042)QWGVGS(0.479)S(0.479)PQRDDLK 60.328 4.6393e-05 10055100.0 1734.47 1624.05 1480.77 1304.31 2228.05 1505.6599999999999 1783.64 1658.5900000000001 2506.7 2375.1 2204.3 True False 2027.2061322798486 1706.7072081215936 1690.7654521716172 1623.8660085527008 1900.3067964799889 1664.9879418237797 2107.704300189877 1893.7002117188458 1938.9364523773509 1838.5632604214097 1656.911474414916 1.2234848774861011 1.030053345924387 1.0204319773744435 0.9800559858673897 1.146896998314904 1.004874410934788 1.2720681416815847 1.1429097093962393 1.1702112528745827 1.1096327648226578 1.0 10.694280808866397 -6.794371116810786 24.9998213230978 1.0996904179015785 1.0580399669164282 0.05189856009090732 0.09217665950941137 599.0352350420392 454750.28977610706 0.014798301535065714 0.02796741374263566 1.6055686632012932e-07 6.794371116810786 -0.0416504509851503 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(ph)SPQRDDLK ddPTM_A549_PD325901_60min_R1 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 42 2 O00139-1;O00139-5;O00139;O00139-4;O00139-2;H0Y8H2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.001)QWGVGS(0.5)S(0.5)PQRDDLK 166.18 1.3932e-53 15323000.0 3269.7 3345.1 2805.4 3233.9 3480.3 3611.0 3029.7 2877.3 3661.9 3459.7 4015.9 True False 3601.6375369740817 3627.0033166294716 2995.7913142406496 3433.650658280221 3235.8557343831976 3581.5932132232347 3144.9968914154524 2819.9099943018177 3508.0030776002745 3241.253951563906 3521.9697588875642 1.0226202334320103 1.0298223905747228 0.8506010895411233 0.9749233790595523 0.9187630660989158 1.0169290080317166 0.8929653309711606 0.8006627504923561 0.9960344119218953 0.9202957928257953 1.0 11.782166806298486 -8.943414642185466 24.999917691730136 0.9982521731011555 0.9375801333078553 0.007285867619917896 0.07271848211091364 121.46650643866121 53664.84524728956 0.011854956841939927 0.01262015824256771 1.139161654842882e-09 8.943414642185466 -0.06067203979330027 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSS(ph)PQRDDLK ddPTM_A549_MK2206_60min_R1 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 42 2 O00139-1;O00139-5;O00139;O00139-4;O00139-2;H0Y8H2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.166)S(0.834)PQRDDLK 113.88 7.6818e-22 5486800.0 618.59 739.8 706.54 479.02 1034.7 1053.0 1047.7 680.19 1437.6 1235.3 1565.3 True False 722.9928689265265 777.4526600587141 806.7379961623577 596.3799215040247 882.4970006588023 1164.4277610751703 1238.053528351537 776.6090154945116 1111.9858953754656 956.2448720468901 1176.592809917737 0.6144801012145191 0.6607661150955619 0.6856560650058382 0.5068702753212654 0.7500445296113133 0.9896607826088814 1.0522361839335879 0.6600490917064241 0.9450898271707198 0.8127237086496791 1.0 10.200399409837162 -7.084565651120692 3.916211070513741 0.9542577094193887 0.6244623574972505 0.5811872686065087 0.11282391532340795 0.10260684316651797 2.9250548487349057 0.015605052921130787 0.02819185069123753 8.230654069481836e-08 7.084565651120692 -0.32979535192213816 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSS(ph)PQRDDLK ddPTM_A549_PD325901_60min_R1 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 42 2 O00139-1;O00139-5;O00139;O00139-4;O00139-2;H0Y8H2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.184)S(0.816)PQRDDLK 157.8 2.2241e-52 15225000.0 2176.7 2018.7 2028.9 1687.5 1674.4 1793.3 1797.5 1357.5 2335.6 2224.6 2765.4 True False 2397.6769815981534 2188.8229336282657 2166.593354766824 1791.733042409434 1556.7959203664134 1778.6959593667211 1865.9048461297423 1330.4235975618512 2237.442854267786 2084.13837634739 2425.2733313149397 0.9886213445056009 0.9025056703367637 0.8933398668067389 0.7387757162356576 0.6419053474365904 0.7334002054120408 0.7693585799329604 0.5485664565653388 0.9225528625487688 0.8593416459238463 1.0 11.243931634646717 -8.97663718193401 22.796199189006558 0.9658326243945686 0.7749944464874727 0.22516920147894093 0.12077963539757447 50.96953933447809 49734.54627165166 0.02172213757673209 0.02242092912121386 1.055268119777983e-09 8.97663718193401 -0.1908381779070959 ELVEPLT(ph)PSGEAPNQALLR ddPTM_A549_MK2206_60min_R1 7 ELVEPLTPSGEAPNQALLR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 ELVEPLT(0.998)PS(0.002)GEAPNQALLR;ELVEPLT(0.999)PS(0.001)GEAPNQALLR;ELVEPLT(0.986)PS(0.014)GEAPNQALLR;ELVEPLT(0.993)PS(0.007)GEAPNQALLR;ELVEPLT(0.993)PS(0.007)GEAPNQALLR;ELVEPLT(0.952)PS(0.048)GEAPNQALLR;ELVEPLT(0.922)PS(0.078)GEAPNQALLR 272.32 2.4744999999999997e-111 603221900.0 14653.009999999998 13978.67 12600.97 10842.48 16946.57 10834.71 11140.53 11066.75 16805.89 16116.01 18078.76 True False 17126.079856300737 14690.124595272977 14387.977025365832 13498.888086737414 14453.752001985533 11981.231820701574 13164.620095643926 12635.495703000459 12999.382748491638 12475.39214794495 13589.304943607227 1.2602616489489629 1.0810063249175672 1.0587721068202478 0.9933464693562309 1.063612308500367 0.8816662714113179 0.9687485968027317 0.9298117714949456 0.9565892297241365 0.9180301862174126 1.0 13.730184047571262 -2.9780277886321094 0.6365699747543189 0.9710025566909123 6.793651512506523 0.7970471857620556 0.04488932163376643 14.844765842911778 0.35367608740061773 0.006932686364767884 112.09099358294519 0.001051894565470229 2.9780277886321094 5.822648955815611 ELVEPLT(ph)PSGEAPNQALLR ddPTM_A549_PD325901_60min_R1 4 ELVEPLTPSGEAPNQALLR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 ELVEPLT(0.844)PS(0.156)GEAPNQALLR;ELVEPLT(0.999)PS(0.001)GEAPNQALLR;ELVEPLT(0.855)PS(0.145)GEAPNQALLR;ELVEPLT(0.999)PS(0.001)GEAPNQALLR 199.08 1.5837e-54 323001100.0 3973.6200000000003 4392.05 4362.01 4478.360000000001 4280.22 4304.349999999999 4778.03 5200.28 6059.1900000000005 7208.29 7991.13 True False 4377.018977175562 4762.183467400814 4658.042229496991 4754.9781261065 3979.5921131573878 4269.296800702696 4959.8605462883415 5096.556335859257 5804.543315700818 6753.157339225535 7008.271669946752 0.6245504146115413 0.6795089704958593 0.6646492100858274 0.6784808509203565 0.5678421586056501 0.6091796953320923 0.7077152227927297 0.7272201444065852 0.8282417675947372 0.9635981105277052 1.0 12.77484298558409 -9.134265948655132 0.6332434500067021 0.9775807414521106 0.6344961207770425 0.9175315525372489 0.038632334644695704 0.12834749299561354 0.11465658857697832 0.015676555875579673 0.012066523765675496 7.340642120257905e-10 9.134265948655132 -0.34308462067506806 ELVEPLTPS(ph)GEAPNQALLR ddPTM_A549_PD325901_60min_R1 2 ELVEPLTPSGEAPNQALLR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 ELVEPLT(0.059)PS(0.941)GEAPNQALLR;ELVEPLT(0.001)PS(0.999)GEAPNQALLR 216.26 1.8655e-66 27920000.0 4763.5 3928.3 4811.9 4621.8 4945.2 5093.1 4721.4 4712.7 5227.1 5134.299999999999 5191.5 True False 5247.087013296645 4259.351627370048 5138.464470305329 4907.278089130622 4597.866212013847 5051.623482211924 4901.075460649216 4618.7015014583685 5007.423164729895 4810.119421774882 4552.978411629966 1.1524515468585734 0.9355088564641799 1.128594077489983 1.0778171222151296 1.0098589969742051 1.1095206314416595 1.07645479893559 1.0144351859127032 1.0998126307691491 1.056477537755963 1.0 12.152594903362878 -11.004505551366487 1.2530282639837027 0.9995876670148356 1.067512118479279 0.02929977146345364 0.060573311345467604 0.6649449143687142 1.8396850967559262 0.038909129565095374 0.00862350749132271 9.896792132199239e-12 11.004505551366487 0.06792445146444348 ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR ddPTM_A549_PD325901_60min_R1 1 ELVGPPLAETVFTPKTSPENVQDR 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 2 ELVGPPLAET(0.138)VFT(0.861)PKT(0.521)S(0.479)PENVQDR 56.533 0.00088461 2520600.0 918.04 803.23 710.67 750.05 1139.7 664.67 813.81 758.13 958.24 889.01 1028.0 True False 1011.2387449746715 870.9210110359305 758.9003398058746 796.3788850128575 1059.651403751553 659.257147890636 844.7799848839192 743.0085024085205 917.9685051693618 832.8777568806046 901.5625170289142 1.1216512730666683 0.9660128882753886 0.841761192897437 0.883331848840957 1.1753498883733748 0.7312384171240927 0.9370176431778453 0.8241341985435396 1.018197282862328 0.9238158653992635 1.0 9.816283725670154 ELVGPPLAETVFT(ph)PKTS(ph)PENVQDR ddPTM_A549_MK2206_60min_R1 2 ELVGPPLAETVFTPKTSPENVQDR 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 2 ELVGPPLAET(0.017)VFT(0.925)PKT(0.37)S(0.687)PENVQDR;ELVGPPLAET(0.003)VFT(0.996)PKT(0.157)S(0.844)PENVQDR 102.05 6.371500000000001e-11 8924200.0 1487.85 1405.19 1492.8200000000002 1033.61 2398.8 1225.23 1470.93 1462.02 2249.1000000000004 1635.56 2430.3 True False 1738.9627055599528 1476.7081689482363 1704.524323366109 1286.8444964005155 2045.9396976711457 1354.8830253581484 1738.1789409736803 1669.265812248468 1739.6824410746804 1266.0858600542472 1826.7894371322275 0.9519229037638028 0.8083625506760299 0.9330710418612582 0.7044295692998199 1.1199647075269659 0.7416744359355952 0.9514938643954216 0.9137702344441805 0.9523168930764723 0.6930661160608653 1.0 10.835094637559193 -8.820099639603672 0.5406714974007493 0.9953093821801741 0.8732363067565049 0.0 0.13986280399308115 0.9287539005270897 0.6241156821640447 0.03532078251988212 0.0328514532611322 1.5132140339299415e-09 8.820099639603672 -0.12207307542366919 ELVGPPLAETVFT(ph)PKTS(ph)PENVQDR ddPTM_A549_PD325901_60min_R1 2 ELVGPPLAETVFTPKTSPENVQDR 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 2 ELVGPPLAET(0.001)VFT(0.999)PKT(0.246)S(0.754)PENVQDR;ELVGPPLAET(0.058)VFT(0.939)PKT(0.284)S(0.719)PENVQDR 128.58 9.5679e-23 13753000.0 6315.8 7015.9 6249.0 6619.3 6881.0 7010.200000000001 7106.1 7304.1 6977.200000000001 7433.6 7574.9 True False 6956.975366553776 7607.154515303192 6673.094718289659 7028.159127478974 6397.7022981613045 6953.111255424405 7376.526524107121 7158.413995544396 6683.972547866583 6964.241227373891 6643.235321247388 1.0472269956030216 1.1450978548016888 1.0044947071115742 1.0579422205623916 0.9630401436630156 1.0466453345685234 1.1103816389755774 1.0775493640349134 1.0061321366245906 1.0483207188370722 1.0 12.697670304119148 -2.0000374461332906 0.05560704827054604 0.9049030637825262 1.317771153418939 0.0 0.0506812306070632 379.2162136127432 1.539338838295266 2.439938928277163 12.893136377097154 0.00999913780808783 2.0000374461332906 0.41286808963641275 ELVLDNS(ph)R ddPTM_A549_MK2206_60min_R1 2 ELVLDNSR 8 0 P39687;H0YN26;H7BZ09 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 1 ELVLDNS(1)R;ELVLDNS(1)R 88.49600000000001 0.002684 6083200.0 1334.69 1316.8600000000001 1432.47 1546.1 2198.54 1906.96 1699.08 1484.91 2234.4 2313.4 1825.01 True False 1559.953041962439 1383.8825492361705 1635.6157858899592 1924.8945694070658 1875.1376783883263 2108.7532414624006 2007.7808427522455 1695.4005398461545 1728.3119676036022 1790.8013332739213 1371.8096492863785 1.137149780783313 1.0088007107663022 1.192305205566103 1.403179056517356 1.3669080687424682 1.5372054297470377 1.4636001749927199 1.2358861455218 1.2598773951638829 1.305429899990501 1.0 10.421864593372135 -10.260684480204374 0.7835661450609324 1.0084422363263008 1.2957523063588658 0.0 0.16734726998651037 0.5848194896528276 0.6845853568073333 0.09129815244530937 0.032309032237508896 5.486754389948911e-11 10.260684480204374 0.28731007003256503 ELVLDNSR ddPTM_A549_PD325901_60min_R1 2 ELVLDNSR 8 0 P39687;H0YN26;H7BZ09 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ; 130.75 0.0029669 10768300.0 4434.299999999999 4099.700000000001 4431.799999999999 3837.0 5364.7 4309.700000000001 4102.6 4443.0 4370.8 4841.2 4705.1 False True 4884.466871640872 4445.1961068984 4732.568598578349 4074.002775540741 4987.901979210284 4274.603232076484 4258.726688028861 4354.3808795339255 4187.1104758664305 4535.52580579564 4126.402528086325 1.1837107113023484 1.0772570239190697 1.146899403624867 0.9873013473142948 1.2087773660616408 1.0359152319681446 1.0320676809986113 1.0552486942066044 1.014712076043696 1.0991476897672052 1.0 12.010668846785258 -5.584156055805346 0.21882150081709964 0.9862773403330448 1.2622033556387282 0.18703691399034028 0.06442493566557128 6.806118472838272 0.3045616243970552 0.045184484523306576 0.5102679006381929 2.605217244460344e-06 5.584156055805346 0.2759260153056834 ELVPELSLDTGT(ph)LEKK ddPTM_A549_MK2206_60min_R1 2 ELVPELSLDTGTLEKK 16 1 Q04656-5;Q04656;Q04656-2;Q04656-3 Q04656-5 ATP7A Copper-transporting ATPase 1 1 ELVPELSLDTGT(1)LEKK;ELVPELSLDT(0.037)GT(0.963)LEKK 195.78 2.2561999999999997e-39 18658600.0 3533.1 3740.7 4223.4 3910.7 5572.700000000001 4409.200000000001 4645.2 4181.5 7268.5 7755.700000000001 6756.9 True False 4129.400903998304 3931.085652178472 4822.3416267898465 4868.821675557994 4752.963212111052 4875.778617409918 5489.1727115572785 4774.240430306676 5622.196355409407 6003.681983432421 5078.975249046927 0.8130382019036593 0.7739918899813781 0.9494713776553177 0.9586228396115204 0.9358114538957338 0.9599925926642113 1.0807638238810722 0.9400007277457327 1.1069548638703084 1.1820656114752706 1.0 12.310321728066638 -5.760959084784007 0.5056856098555306 1.0457812580780146 0.6796871801767048 0.6494044000047815 0.06741357648327308 1.1514586297123954 0.26518199342999244 0.011843825424385605 0.22565257905471645 1.7339673484521682e-06 5.760959084784007 -0.36609407790130977 ELVPELSLDTGT(ph)LEKK ddPTM_A549_PD325901_60min_R1 2 ELVPELSLDTGTLEKK 16 1 Q04656-5;Q04656;Q04656-2;Q04656-3 Q04656-5 ATP7A Copper-transporting ATPase 1 1 ELVPELSLDT(0.025)GT(0.975)LEKK;ELVPELSLDT(0.005)GT(0.995)LEKK 165.17 4.0496999999999994e-21 35336000.0 8501.7 8735.8 10070.3 9016.4 10939.8 9313.5 9154.5 10761.7 11655.400000000001 10652.1 10575.0 True False 9364.786325379257 9471.996524292765 10753.731115633274 9573.322550269877 10171.42618826116 9237.65394388108 9502.879507034611 10547.049451109668 11165.564070745317 9979.524588101247 9274.342040448217 1.0097520971877665 1.0213119683296688 1.159514181031171 1.0322373822873596 1.0967275245942503 0.9960441294479836 1.024641906195574 1.137228862717246 1.2039198060680647 1.076035857269175 1.0 13.17902921937095 -8.25533676395733 24.763909937611857 1.1020560772813102 1.0510201070091536 0.15343831500431904 0.06268431263864666 944.9964970847242 3834726.762681115 0.013596244735031082 0.017337775354621467 5.55473360814663e-09 8.25533676395733 -0.05103597027215656 ELVS(ph)DDEER ddPTM_A549_MK2206_60min_R1 2 ELVSDDEER 9 0 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2;A0A2R8Y7V5;H0Y850 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 ELVS(1)DDEER;ELVS(1)DDEER 100.88 0.00075677 3686100.0 392.08 540.64 428.96 520.9300000000001 546.25 571.55 530.97 763.38 962.6199999999999 594.87 192.61 True False 458.2535185643353 568.1562667398531 489.7929782231785 648.5578733854364 465.89734861299945 632.0310416358157 627.4403760129954 871.5914527532012 744.5881069882656 460.48845384484224 144.77962123443135 3.165179703173266 3.924283417069299 3.383024309962046 4.479621288242444 3.217976015136861 4.365469644463379 4.3337616901001965 6.0201252449880025 5.142906858297461 3.180616511623594 1.0 7.177714736856876 -6.871674550719537 19.386479399998247 3.4635590429765033 3.7413792944831226 0.0 1.2854340816736005 17.935720253749977 3055.5816174361685 0.26746341450468786 0.5054613895176344 1.343771572293726e-07 6.871674550719537 0.27782025150661926 ELVS(ph)DDEER ddPTM_A549_PD325901_60min_R1 2 ELVSDDEER 9 0 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2;A0A2R8Y7V5;H0Y850 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 ELVS(1)DDEER;ELVS(1)DDEER 117.67 0.00017565 4131000.0 762.29 578.69 636.24 840.52 854.58 656.85 517.4 665.26 690.72 522.9399999999999 594.37 True False 839.6771196317619 627.4582372127318 679.4190724219255 892.4370114405796 794.5572489409519 651.5008313779238 537.0899401321437 651.9908674136257 661.6914404435024 489.92147915450096 521.2662580218632 1.610841113749096 1.2037192654553417 1.30340121188782 1.7120559746707191 1.5242829105344207 1.2498427077368937 1.0303562370799317 1.250782795510005 1.2693924271149533 0.9398680072132204 1.0 9.025876665937268 -7.44475146034458 4.351137121555029 1.1349847866443021 1.4582810599920812 0.547909473516691 0.15968538493228218 0.15899399410402765 5.57720216731576 0.025287844705950264 0.04059817945045825 3.591273986060112e-08 7.44475146034458 0.3232962733477791 ELVSSSSSGSDS(ph)DSEVDKK ddPTM_A549_MK2206_60min_R1 1 ELVSSSSSGSDSDSEVDKK 19 1 P53999;D6RC37;D6R970 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 ELVSSSSSGS(0.001)DS(0.997)DS(0.002)EVDKK 218.69 3.9825999999999994e-67 36265000.0 14650.0 15192.0 16151.0 14541.0 21698.0 18163.0 17492.0 17870.0 24683.0 22435.0 23754.0 True False 17122.561841888168 15965.207909721537 18441.454660766893 18103.545652770285 18506.2529431668 20084.996604376367 20670.069979884578 20403.127224579774 19092.339910651513 17366.917918215793 17855.226222951474 0.9589663904609886 0.8941476131621078 1.0328323164599207 1.0139073807700971 1.0364614097904 1.1248805449778452 1.1576481710052402 1.1426977720592066 1.0692858030613932 0.9726517996110293 1.0 14.124058792311999 -5.8633885790241616 4.91993210799434 1.054960546338067 0.9272098269732167 0.44165371703237366 0.058337970427790375 0.15509197612993347 6.06799323906302 0.008799766960125112 0.029149977645834626 1.3696557370969902e-06 5.8633885790241616 -0.12775071936485016 ELVSSSSSGSDS(ph)DSEVDKK ddPTM_A549_PD325901_60min_R1 2 ELVSSSSSGSDSDSEVDKK 19 1 P53999;D6RC37;D6R970 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 ELVSSSSSGSDS(0.989)DS(0.011)EVDKK;ELVSSSSSGS(0.171)DS(0.791)DS(0.038)EVDKK 252.01 1.7990999999999995e-97 120778000.0 11623.2 12106.6 12421.599999999999 12305.900000000001 14615.7 11985.5 12455.099999999999 13173.1 13261.1 13647.7 12872.1 True False 12803.17870745241 13126.865670116395 13264.604473148798 13066.007494273334 13589.143653427727 11887.894061779858 12929.085646192232 12910.352186402968 12703.782083717466 12785.98189286895 11288.91330296486 1.1341373933742456 1.1628103890804817 1.1750116346154464 1.157419420595758 1.203760121876279 1.0530592044371254 1.1452905429609956 1.1436310865291401 1.1253325933844325 1.1326140567941918 1.0 13.462618995166135 -11.245085593422306 0.2971445306373376 0.9011107815568913 1.1633320154343538 0.06426749367885687 0.05264420199044842 1.987494232510487 0.1721853489465386 0.1812633210719159 0.015868975543493386 5.68740828863699e-12 11.245085593422306 0.26222123387746255 ELWFSDDPNVT(ph)KTLR ddPTM_A549_MK2206_60min_R1 1 ELWFSDDPNVTKTLR 15 1 O95831-3;O95831;O95831-6;O95831-4 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 1 ELWFS(0.015)DDPNVT(0.549)KT(0.436)LR 49.049 0.010256999999999999 923280.0 696.83 764.24 636.05 386.47 611.08 596.89 554.77 606.44 881.51 765.04 958.99 True False 814.4378681421798 803.1365516670348 726.2514542121706 481.1551673492976 521.1909414927811 660.0525036164845 655.5645279408053 692.4047271446093 681.8493924822104 592.2169326566442 720.8463162224563 1.1298356526397795 1.1141578081106311 1.0074983222749054 0.6674864759949901 0.7230264340172328 0.9156632818427132 0.9094373005556087 0.9605441708755715 0.9459011957713727 0.8215578263063267 1.0 9.493547900756532 -5.89737472565838 4.470859723800544 0.9270927515172372 1.1196645120549744 0.3874459563489696 0.10813179855638658 0.2012724232213743 6.974820178326258 0.016492681869715007 0.055133507765693604 1.2665585597592572e-06 5.89737472565838 0.19257176053773717 ELWFSDDPNVTKT(ph)LR ddPTM_A549_PD325901_60min_R1 2 ELWFSDDPNVTKTLR 15 1 O95831-3;O95831;O95831-6;O95831-4 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 1 ELWFS(0.018)DDPNVT(0.198)KT(0.784)LR;ELWFS(0.046)DDPNVT(0.423)KT(0.531)LR 56.817 0.0045579999999999996 3214600.0 1458.63 1539.8400000000001 1160.0 1422.2 1684.93 1370.15 1269.31 1445.27 1816.11 1926.83 1926.92 True False 1606.7090438133469 1669.6077208689505 1238.7245756466646 1510.0460639494506 1566.5863294929418 1358.9919526717854 1317.614286643084 1416.4429560576184 1739.7852123926475 1805.1696249651354 1689.9210557522904 0.9507598229777067 0.9879797137184629 0.7330073623440535 0.8935601215272354 0.9270174628338218 0.8041748151760926 0.7796898453676765 0.8381710797887363 1.0295067964687614 1.068197605338162 1.0 10.72274013759862 -8.7633982550738 24.99497147284994 1.0139337732550224 0.8622836602665344 0.5043044624805859 0.07365127337245417 32.45021247549111 414059.2246730655 0.012532426086465156 0.013673278348082307 1.7242559961142547e-09 8.7633982550738 -0.15165011298848807 ELYDKGGEQAIK ddPTM_A549_PD325901_60min_R1 1 ELYDKGGEQAIK 12 1 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 48.659 0.033195999999999996 4909300.0 1990.0 1656.2 1866.2 1771.7 2440.0 2503.0 2161.7 2240.5 2118.4 1988.7 2297.1 False True 2192.0233350394287 1795.7737864344065 1992.8515543722458 1881.1338851773608 2268.622817543029 2482.616397867005 2243.964676427628 2195.811469861751 2029.37101493444 1863.1331426063348 2014.571262516652 1.088084286629354 0.8913925358942536 0.9892186945438339 0.9337638832529568 1.1261070083512508 1.2323298977101755 1.1138671131565792 1.089964654374494 1.0073463533870228 0.9248286110657922 1.0 10.976257124281622 -4.920320356465738 20.527560666575393 1.02616505536169 3.765982823308379 0.025870825658452 0.0970608286335599 1625.9682404615924 457149.636057401 0.013170389998001701 18795.681736170056 1.2013779136451713e-05 4.920320356465738 2.739817767946689 ELYPVEFR ddPTM_A549_PD325901_60min_R1 1 ELYPVEFR 8 0 Q5BJF2;J3KT68 Q5BJF2 TMEM97 Transmembrane protein 97 0 64.836 0.025575999999999998 1151500.0 321.72 425.19 451.58 466.37 401.76 496.18 554.5 556.18 482.63 404.02 619.0 False True 354.3807775622539 461.02225350443456 482.2269343711383 495.17661569688164 373.54176359675733 492.13927458795445 575.6018009340424 545.0865535852304 462.34673949103507 378.51010824951527 542.866924164297 0.6527949333214519 0.8492362179076278 0.8882967683350587 0.9121510146509092 0.6880908505741015 0.9065560134199852 1.0603000022890294 1.004088717367245 0.8516760165537499 0.6972428995047051 1.0 9.084454775690538 -7.507029884252828 24.63077375699725 0.9455278085593477 0.8108020014521271 0.201505702122175 0.11591584783053431 562.7182808174015 874522.9668085874 0.014500442959741981 0.022769123013673134 3.111502224050753e-08 7.507029884252828 -0.1347258071072206 EMDEQIR ddPTM_A549_MK2206_60min_R1 1 EMDEQIR 7 0 P06753-2;P06753-3;P06753-6;A0A087WWU8;J3KN67;A0A2R2Y2Q3;A0A494C0P6 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 48.756 0.034151 1699800.0 689.62 837.52 844.23 725.13 1120.8 637.25 436.18 810.54 838.13 998.41 1161.9 False True 806.0109964097563 880.1461906628473 963.9545085913708 902.7868825523229 955.9318047147821 704.6833720276848 515.4282599946296 925.4365271746443 648.2948932185853 772.86848757414 873.3681631913495 0.9228765489510572 1.007760790646101 1.1037206864388236 1.0336842131426858 1.094534750639111 0.8068571785954751 0.5901614939926572 1.0596178864512684 0.7422927930526683 0.8849286247737993 1.0 9.770446131422887 -7.262268289301779 24.99616189970795 0.8621033188362568 1.0351609267423454 0.34964898287461244 0.1248613706567797 80.14445656796309 2416795.0869722334 0.0206865287174639 0.03428014803015221 5.4667814324510337e-08 7.262268289301779 0.1730576079060886 EMDEQIR ddPTM_A549_PD325901_60min_R1 2 EMDEQIR 7 0 P06753-2;P06753-3;P06753-6;A0A087WWU8;J3KN67;A0A2R2Y2Q3;A0A494C0P6 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 60.76 0.01732 5684300.0 1809.15 1779.73 1672.6100000000001 1477.47 1801.18 1547.8000000000002 1602.49 1629.19 1795.19 1790.99 2241.8 False True 1992.8135761741617 1929.714093062977 1786.123372821007 1568.7299663221722 1674.6713305336702 1535.1952299714549 1663.4736338661742 1596.6945273751694 1719.7444072413884 1677.9065857477335 1966.0728119410687 1.0136011057528904 0.9815069316572282 0.9084726475911129 0.7979002388896234 0.8517850002107994 0.7808435275882707 0.8460895363401401 0.81212380216925 0.8747104363563806 0.8534305421227845 1.0 10.941101036392023 -10.43263591924598 0.9068668163254594 0.9956139673195084 0.8712514239646998 0.0 0.08049222115037946 0.5533433039816462 0.8580143013330279 0.04133382166292321 0.013988282453149321 3.692870521162423e-11 10.43263591924598 -0.12436254335480856 EMDMSPEEVVAS(ph)PRAS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 EMDMSPEEVVASPRASPAK 19 1 Q13049 Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 2 EMDMS(0.052)PEEVVAS(0.949)PRAS(0.999)PAK;EMDMS(0.012)PEEVVAS(0.989)PRAS(0.998)PAK 59.356 0.0010902000000000002 2915800.0 1744.8 2053.91 1758.45 1518.66 2962.7 2043.0 2240.9300000000003 1780.82 2785.9 3011.6000000000004 3155.8 True False 2039.279583735597 2158.445246041085 2007.8246516144834 1890.7317681752381 2526.8907546649593 2259.1889039663574 2648.07797393224 2033.256688532521 2154.898098168133 2331.277468352963 2372.1277643508565 0.8596837043866628 0.9099194733432721 0.8464234860317205 0.7970615228192168 1.0652422658846348 0.9523892169377287 1.1163302473536447 0.8571446779085825 0.9084241289835544 0.9827790489990439 1.0 11.211966001135954 -6.74846091543279 24.999002179562666 0.9663618839076155 0.8568291182082075 0.4237633807439124 0.07113145410770601 209.322322564458 403192.3257270091 0.010401058733705176 0.02154487560887592 1.784592586690474e-07 6.74846091543279 -0.10953276569940795 EMDRETLIDVAR ddPTM_A549_PD325901_60min_R1 1 EMDRETLIDVAR 12 1 P40227-2;P40227 P40227-2 CCT6A T-complex protein 1 subunit zeta 0 54.023 0.021706 1576800.0 396.33 456.51 505.42 555.2 560.67 631.26 515.16 672.03 497.87 506.16 610.98 False True 436.56512983727447 494.98169982198436 539.7208405373597 589.4934430493145 521.290473406496 626.119227853586 534.7646957063688 658.625834452664 476.9462552895624 474.20097121819407 535.8333333213288 0.8147405222651104 0.9237605595640566 1.0072550678994425 1.1001432840980176 0.9728593594118344 1.1684962261915022 0.9980056529735913 1.2291617439516382 0.8901018761435414 0.8849784844083691 1.0 9.065640521461832 -5.422111349136991 2.612851876032362 0.9984686164373215 0.8058422580743472 0.24863388642116513 0.10360939761048338 0.4367613352051405 4.677931847370154 0.014957927068493674 0.15435932430283789 3.783455679338589e-06 5.422111349136991 -0.19262635836297437 EMDT(ph)ARTPLSEAEFEEIMNR ddPTM_A549_MK2206_60min_R1 1 EMDTARTPLSEAEFEEIMNR 20 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 1 EMDT(0.599)ART(0.4)PLS(0.001)EAEFEEIMNR 63.122 0.00057655 26981000.0 868.26 754.75 799.01 655.46 928.03 711.34 693.53 521.78 1016.5 1187.1 938.16 True False 1014.8010610810801 793.1635512021016 912.3216326233261 816.0477294247173 791.5180163539076 786.6135266507231 819.5354238022728 595.7439128842329 786.2643730169448 918.9332855232436 705.1889801012097 1.439048382371821 1.124753184725413 1.2937264454875463 1.1572043132432344 1.1224197182439064 1.115464859558394 1.1621500717221247 0.8448003722331721 1.1149697388976485 1.303102163325577 1.0 9.461866119796467 -2.0000000078077167 0.288149331554958 1.0310822738170429 3.744834025133515 0.3222491887041875 0.12342387620294366 25.16638454849331 0.3139381957017622 0.03206601746117948 35.316034459881536 0.00999999982022068 2.0000000078077167 2.713751751316472 EMDTART(ph)PLSEAEFEEIMNR ddPTM_A549_MK2206_60min_R1 5 EMDTARTPLSEAEFEEIMNR 20 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 1 EMDT(0.067)ART(0.922)PLS(0.011)EAEFEEIMNR;EMDT(0.138)ART(0.86)PLS(0.002)EAEFEEIMNR;EMDT(0.188)ART(0.811)PLS(0.001)EAEFEEIMNR;EMDT(0.185)ART(0.814)PLSEAEFEEIMNR;EMDT(0.34)ART(0.656)PLS(0.004)EAEFEEIMNR 69.98100000000001 0.00027064 65293200.0 4629.07 4767.610000000001 4230.48 4216.0 5257.75 4725.6 4104.86 4336.27 6076.63 5453.92 5755.110000000001 True False 5410.343846104388 5010.260984891224 4830.425677251011 5248.92018926343 4484.341939899309 5225.659855400592 4850.659927831522 4950.949551769928 4700.283007384121 4221.875684088056 4325.9573540443835 1.2506697138487044 1.1581854777664597 1.1166142617506376 1.2133545848195102 1.036612609161958 1.2079776631443366 1.1212916658312844 1.1444748864991081 1.086530130258861 0.9759401997204109 1.0 12.078803727721585 -14.999999994893448 0.07159590328249538 0.44451984826972496 1.3343128826372024 0.6252296898556933 0.05182103312099019 88.53841346927399 0.47343861355761535 7.942370224091456 1.024854920211951 1.0000000117582697e-15 14.999999994893448 0.8897930343674774 EMDTART(ph)PLSEAEFEEIMNR ddPTM_A549_PD325901_60min_R1 4 EMDTARTPLSEAEFEEIMNR 20 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 1 EMDT(0.303)ART(0.688)PLS(0.009)EAEFEEIMNR;EMDT(0.046)ART(0.951)PLS(0.003)EAEFEEIMNR;EMDT(0.01)ART(0.99)PLSEAEFEEIMNR;EMDT(0.004)ART(0.996)PLS(0.001)EAEFEEIMNR 150.94 8.2256e-22 98432000.0 8803.3 10566.599999999999 8108.900000000001 9260.0 9830.9 8703.3 8157.099999999999 9013.3 9811.499999999998 9407.6 11582.8 True False 9697.004535353059 11457.084465485921 8659.218716776926 9831.969169014144 9140.41149876384 8632.423210369916 8467.52290423639 8833.522660702942 9399.156775410334 8813.602530488937 10158.189029418776 0.954599733010471 1.1278668306235944 0.8524372495628173 0.9678860218627673 0.8998071873138622 0.8497994263908515 0.8335661878031501 0.8695962080564248 0.9252787822898122 0.8676352157814913 1.0 13.310355605364942 -5.763815760959747 24.99985685269972 0.9315825018669979 1.0412332674665834 0.3058729043123817 0.06911800615936459 60.66679835340062 638258.8270446807 0.010293447152255426 0.03433938175758715 1.722599191482881e-06 5.763815760959747 0.10965076559958553 EMEENFAVEAANYQDTIGR ddPTM_A549_MK2206_60min_R1 2 EMEENFAVEAANYQDTIGR 19 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 71.344 0.00054776 4170900.0 2062.29 2169.46 1589.48 1338.97 2741.3 1449.3200000000002 1436.75 1567.04 2478.0 2348.4 2588.2 False True 2410.354133850345 2279.87624748713 1814.8921648316352 1667.017710108647 2338.058401378151 1602.686080419246 1697.7888774067674 1789.172718858729 1916.7369565528686 1817.8948089653663 1945.4785093139246 1.2389518168979206 1.171884570593962 0.9328770048822894 0.8568677074189438 1.2017909168283076 0.8238004546163994 0.8726844677433598 0.9196568917585644 0.9852264866337733 0.9344204010798604 1.0 10.92590932836146 -5.6727266268617385 4.766610686348153 0.9706033349743542 1.2211613174271028 0.5011140189064869 0.09764677091921921 0.12467486413689742 4.815221845125139 0.012754556731911762 0.05278835399379757 2.1245813906214257e-06 5.6727266268617385 0.2505579824527485 EMEHNTVCAAGT(ph)SPVGEIGEEK ddPTM_A549_MK2206_60min_R1 2 EMEHNTVCAAGTSPVGEIGEEK 22 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 EMEHNTVCAAGT(0.5)S(0.5)PVGEIGEEK;EMEHNTVCAAGT(0.5)S(0.5)PVGEIGEEK 83.905 1.3043e-05 4560000.0 2492.2 2866.2 1774.8 2512.4 3325.3 2704.0 2570.3 2563.5 3858.3 3481.9 3476.3 True False 2912.822431559979 3012.0773374699766 2026.4933274675918 3127.9381127859233 2836.152774998274 2990.1354852300656 3037.2902394979037 2926.8839753894963 2984.4012104390354 2695.3363717154252 2613.038769000849 1.1147260676403048 1.152710542684259 0.7755312900475889 1.1970500208008614 1.0853848816344724 1.1443134792727963 1.1623594244104065 1.1201073669904458 1.142118994116641 1.031494979596512 1.0 11.351512814383296 EMEKS(ph)FDEQNVPK ddPTM_A549_MK2206_60min_R1 2 EMEKSFDEQNVPK 13 1 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 EMEKS(1)FDEQNVPK;EMEKS(1)FDEQNVPK 133.86 7.904e-09 17623800.0 6428.9 9915.2 8191.5 6036.5 9596.5 7218.6 5381.6 7543.8 10151.6 10066.9 9270.3 True False 7513.9411484856555 10419.841328756644 9353.177874662364 7515.442770988783 8184.867562406679 7982.467460681121 6359.367059441278 8613.156751918581 7852.278808774047 7792.780298234303 6968.228662735831 1.0783143768900905 1.4953357349593144 1.3422604692467377 1.0785298724738042 1.1745980160176284 1.1455518822694726 0.9126231883648456 1.2360611525249412 1.1268687049215065 1.1183301632892657 1.0 12.766576251478066 -6.2641290880022416 23.685425462129466 1.0784743375135757 1.3243067639646546 0.34693407902359963 0.12293886016424818 75.43616781443087 664297.8120458951 0.01654149856039764 0.04017293485611494 5.44340831043031e-07 6.2641290880022416 0.24583242645107894 EMEKS(ph)FDEQNVPK ddPTM_A549_PD325901_60min_R1 2 EMEKSFDEQNVPK 13 1 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 EMEKS(1)FDEQNVPK;EMEKS(1)FDEQNVPK 101.05 4.087e-05 37247000.0 11233.8 12023.8 11094.7 10310.9 15960.0 13669.4 12923.1 13896.7 14237.6 13150.5 15370.7 True False 12374.247106113538 13037.08782352977 11847.653059850902 10947.78087524708 14839.02465901097 13558.080938475123 13414.895642291665 13619.519416749756 13639.243184587694 12320.175185721624 13480.201342895258 0.9179571425789859 0.9671285681798046 0.8788928858317987 0.8121377861330765 1.1008014110139297 1.0057773317770888 0.9951554358171355 1.010335014315489 1.0117981799861069 0.9139459324333441 1.0 13.718554424602395 -6.760203481643143 24.999978452870806 1.0107662015756422 0.8981693399339845 0.5041656834454114 0.05290320116030643 17.088213619828 345648.3283845829 0.006192139162949665 0.012352323833236822 1.736986801041207e-07 6.760203481643143 -0.11259686164165772 EMFEDT(ph)VEER ddPTM_A549_MK2206_60min_R1 2 EMFEDTVEER 10 0 E9PC52;Q16576 E9PC52 RBBP7 Histone-binding protein RBBP7 1 EMFEDT(1)VEER;EMFEDT(1)VEER 125.22 1.6641e-05 1594970.0 499.39 770.8199999999999 556.96 405.69 770.9200000000001 353.14 616.61 436.86 882.81 637.5699999999999 608.05 True False 583.6748230867257 810.0514455615818 635.9453029447541 505.08406821211616 657.5186892315492 390.50904040463996 728.6400554708802 498.78624282764 682.8549445578844 493.54249418840436 457.0544036737239 1.2770357716614233 1.7723304688687582 1.3913995748277146 1.1050852243241465 1.4386004903279088 0.8544038461631616 1.5942085878928152 1.0913060651390356 1.4940342748460904 1.0798331450728742 1.0 8.836222090810482 -10.969447160470379 1.1781735792216086 0.9958157674945075 1.3479710487452048 0.1771626182076942 0.24313536178960884 0.5969525171819985 1.4441479498954917 0.17396001072644832 0.038236026014986206 1.0728841750444658e-11 10.969447160470379 0.3521552812506973 EMFEDT(ph)VEER ddPTM_A549_PD325901_60min_R1 2 EMFEDTVEER 10 0 E9PC52;Q16576 E9PC52 RBBP7 Histone-binding protein RBBP7 1 EMFEDT(1)VEER;EMFEDT(1)VEER 91.93700000000001 0.00066821 1986150.0 650.37 739.62 876.3599999999999 920.28 1132.3000000000002 702.4300000000001 762.35 830.97 912.58 989.61 985.54 True False 716.3950836229111 801.9503730966161 935.8350595807849 977.1236054924767 1052.771154222939 696.7096429699242 791.3616464239265 814.3956514666457 874.2274361824346 927.1258557121013 864.3248278527968 0.828849363731248 0.9278344752503122 1.082735366870853 1.1305050763379096 1.218027204932075 0.8060738515411254 0.9155836103769812 0.9422333192600889 1.0114570448638371 1.0726590580711632 1.0 9.755429793207766 -7.2641677788150565 24.999552342750654 0.9803274231027989 1.0391627370567693 0.08975265552026235 0.1147125370283705 636.8611388391605 5835366.229416848 0.01745471247704287 0.028678968834846462 5.4429233848335825e-08 7.2641677788150565 0.05883531395397046 EMFPYEAST(ph)PTGISASCR ddPTM_A549_MK2206_60min_R1 1 EMFPYEASTPTGISASCR 18 0 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 EMFPYEAS(0.129)T(0.777)PT(0.085)GIS(0.003)AS(0.006)CR 99.45100000000001 4.987e-07 2888100.0 1569.1 1634.5 1283.5 1275.1 2323.9 1715.4 1397.6 1536.5 2793.8 2250.9 2450.7 True False 1833.9257191881732 1717.6890684860361 1465.5195998448567 1587.4995572414136 1982.0573884517144 1896.9224894096362 1651.5258291725747 1754.3035803339017 2161.008760781842 1742.420126682058 1842.1235541208691 0.9955497909386386 0.9324505213798117 0.7955598833566069 0.8617769170206546 1.075963327225153 1.0297476980662783 0.8965336909557867 0.9523267733097965 1.1731073933383132 0.9458758196670509 1.0 10.84715411315949 -7.790136397517167 0.7992744651058675 1.0749134854600366 0.9119454230836015 0.04189126263189913 0.09673523812604806 0.5717860342796129 0.7368164150837316 0.021136018864287166 0.037829657822195044 1.6213008204835748e-08 7.790136397517167 -0.16296806237643513 EMFPYEAST(ph)PTGISASCR ddPTM_A549_PD325901_60min_R1 1 EMFPYEASTPTGISASCR 18 0 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 EMFPYEAS(0.267)T(0.731)PT(0.002)GISASCR 115.8 5.581099999999999e-10 4377700.0 3528.3 3466.2 4080.8 3634.3 4107.6 4298.3 3463.4 4847.6 3743.9 4167.1 4166.1 True False 3886.49041860282 3758.3088386299596 4357.747627843887 3858.7824569058407 3819.096346450716 4263.296069896824 3595.2015822452017 4750.910815131366 3586.556902762956 3903.9885948382675 3653.6961110838097 1.0637147426718954 1.0286320275046406 1.192695696454961 1.0561311996364129 1.04526929179062 1.1668447348326914 0.983990313627573 1.3003026717846233 0.9816243041896174 1.0685039138846752 1.0 11.835140930323115 EMGS(ph)LSIKDPK ddPTM_A549_MK2206_60min_R1 2 EMGSLSIKDPK 11 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 EMGS(0.998)LS(0.002)IKDPK;EMGS(0.981)LS(0.019)IKDPK 63.754 0.0014939 57159000.0 8063.2 10152.400000000001 9227.9 9068.9 12777.6 11815.7 10884.2 11230.8 15652.8 15197.199999999999 13622.1 True False 9424.071033686872 10669.113795593534 10536.554978892369 11290.780907118387 10898.031966384367 13066.029531373119 12861.718252633184 12822.800292882524 12107.46579238528 11764.141965086206 10239.356619165923 0.9203772643338736 1.0419711113121302 1.0290251009687614 1.1026846048104644 1.064327806103124 1.2760596214528028 1.2561060944550706 1.2523052736419922 1.182443999432801 1.1489141752389214 1.0 13.32183744727999 -5.566420210106241 1.0165215259689728 1.1257626284838078 0.8923262187026441 0.4000056817329033 0.0864263118873298 1.4225315755351082 1.5639685496780726 0.016889893390245544 0.31874828958203516 2.71381219612452e-06 5.566420210106241 -0.23343640978116376 EMGS(ph)LSIKDPK ddPTM_A549_PD325901_60min_R1 3 EMGSLSIKDPK 11 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 EMGS(0.992)LS(0.008)IKDPK;EMGS(0.987)LS(0.013)IKDPK;EMGS(0.997)LS(0.003)IKDPK 91.845 6.7118e-05 106752000.0 23814.0 24901.5 24014.800000000003 24761.100000000002 29164.3 25471.0 24505.8 26333.0 24424.9 26471.9 27452.2 True False 26231.57974905978 27000.03679682185 25644.588740723713 26290.53691046179 27115.90017937302 25263.572620883147 25438.38162908829 25807.767657161134 23398.406392877736 24800.459716277277 24075.75343383381 1.0895434621039264 1.1214617590691274 1.0651624594512257 1.091992281060477 1.1262742100218919 1.0493367399825622 1.056597530748075 1.0719401877946346 0.9718660085626151 1.0301010842478988 1.0 14.555293326455045 -8.699334094818092 5.29912606195404 0.9867106590430296 1.085049710822944 0.6487460146266827 0.02686604109560172 0.06822679210540764 3.7743210350606953 0.004288279819139325 0.004830158642154187 1.9983240040001687e-09 8.699334094818092 0.09833905177991442 EMISLLS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 EMISLLSPQK 10 0 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 EMIS(0.022)LLS(0.978)PQK 61.343999999999994 0.0075658999999999995 1127100.0 360.57 626.92 515.73 560.57 946.51 428.86 669.02 653.13 960.41 711.75 796.82 True False 421.4254009098715 658.8275502081768 588.8682689738902 697.9096751649433 807.2796328342148 474.2416805457717 790.572274064852 745.7131776267373 742.8786684596206 550.965180668157 598.9476028867634 0.7036097963807125 1.0999752683420194 0.9831715932006512 1.1652265937808413 1.3478301423085226 0.7917915995657328 1.3199356174972736 1.245039088615772 1.2403066059186962 0.9198887816107048 1.0 9.226285988511922 -4.8316219960102025 1.387981822935309 1.1319276136319043 1.4620191247015466e-10 0.32435289961229496 0.16729953670394773 3.0107807003814835 2.2744459553576366 0.022466198242950083 6.378024267466303 1.4735945409942122e-05 4.8316219960102025 -1.1319276134857024 EMISLLS(ph)PQKK ddPTM_A549_MK2206_60min_R1 2 EMISLLSPQKK 11 1 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 EMIS(0.002)LLS(0.998)PQKK;EMIS(0.084)LLS(0.916)PQKK 60.628 0.0034364000000000005 5574200.0 1756.33 1807.5700000000002 2252.4 2559.1 3265.3 2443.2 2122.93 2223.2 3714.9 3197.3999999999996 3412.5 True False 2052.75556585416 1899.5675922442972 2571.8241890849686 3186.079614882363 2784.978695516753 2701.7378023350975 2508.6389013489816 2538.345408264452 2873.4810814762895 2475.105119309257 2565.082069791273 0.8002689621627574 0.7405484661154992 1.0026284224481925 1.242096559952026 1.0857269357246622 1.0532753841107876 0.9779955701585468 0.989576683786575 1.1202296859492342 0.9649223892125457 1.0 11.324789270255323 -5.8343656287905 4.940153435215579 1.0609681196537153 0.7702269191465139 0.663501653028486 0.07668697937162353 0.07967415383378706 3.542976606495673 0.01065393188492355 0.03572567692146076 1.464314528059158e-06 5.8343656287905 -0.2907412005072014 EMISLLS(ph)PQKK ddPTM_A549_PD325901_60min_R1 2 EMISLLSPQKK 11 1 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 EMISLLS(1)PQKK;EMIS(0.03)LLS(0.97)PQKK 82.069 7.6643e-05 4337700.0 3749.3 3793.2 4232.1 3758.7 4665.6 4550.4 4748.5 5047.9 5265.0 4803.6 3748.1 True False 4129.926175911219 4112.8662762365575 4519.315755684698 3990.866362372945 4337.904351446213 4513.343051080311 4929.206765978902 4947.21567449906 5043.730359530692 4500.2998762124935 3287.1074611634917 1.2564013269129346 1.2512113841209145 1.3748609709537938 1.2140967125426296 1.3196722050306153 1.3730439617215269 1.4995575362888134 1.5050361854455354 1.534397770417105 1.3690759822678826 1.0 11.682602906019 -10.934334510083321 1.214588306115842 1.0017133598182222 1.3827966004508498 0.0 0.14779307973136643 0.2667539973991205 0.7043643633464742 0.0835012628882196 0.019989832964811046 1.1632297206156409e-11 10.934334510083321 0.38108324063262766 EMLAS(ph)DDEEDVSSK ddPTM_A549_MK2206_60min_R1 2 EMLASDDEEDVSSK 14 0 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;Q0ZGT2-3 E7ETM8 NEXN Nexilin 1 EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK 140.1 4.3593e-10 3783400.0 2162.3 2248.3999999999996 1934.8899999999999 2101.9 3345.3 2707.0 2093.5699999999997 2559.4 3229.2 3324.2 3375.6 True False 2527.2433768406 2362.833956307128 2209.2864967228807 2616.8655943578756 2853.210801492112 2993.452943238828 2473.9445693909774 2922.20278783377 2497.7913559727685 2573.2609112428345 2537.345358179464 0.9960186809784096 0.9312228422868115 0.8707078402240189 1.0313399340464506 1.1244865789729468 1.1797577864554551 0.9750129446966667 1.1516771961742094 0.9844112658613114 1.0141547751659397 1.0 11.30910418270924 -6.287716511341762 23.426887068820236 1.0274493059944798 0.9325070944879975 0.30362115130299727 0.07474100022331992 384.203505553348 342529.0101769309 0.011460867525854507 0.026643557744270872 5.155650733528066e-07 6.287716511341762 -0.0949422115064823 EMLAS(ph)DDEEDVSSKVEK ddPTM_A549_MK2206_60min_R1 4 EMLASDDEEDVSSKVEK 17 1 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;Q0ZGT2-3 E7ETM8 NEXN Nexilin 1 EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK 180.32 1.2613e-31 28588300.0 13175.8 15781.400000000001 14365.800000000001 12528.600000000002 19221.6 14538.599999999999 13814.599999999999 14481.1 22472.5 21081.4 21227.5 True False 15399.552922617757 16584.605852190587 16403.086456915655 15598.107562430234 16394.12810269955 16077.065002058376 16324.534000921194 16533.840271508805 17382.514631208353 16319.097098331824 15956.125900804169 0.9651185393217309 1.039388004036415 1.0280118469163595 0.9775623268079195 1.0274504102448394 1.0075794777508063 1.023088818827787 1.0362064309529873 1.0893944268973395 1.022748078060061 1.0 13.961822791626222 -8.101309948120614 2.7839367458601134 1.042950040119888 1.0095805374509417 0.17843269326798206 0.028606966702354873 0.40918407731214995 6.1833480521806745 0.006018804806740036 0.008039492448099528 7.919359383867028e-09 8.101309948120614 -0.03336950266894623 EMLAS(ph)DDEEDVSSKVEK ddPTM_A549_PD325901_60min_R1 3 EMLASDDEEDVSSKVEK 17 1 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;Q0ZGT2-3 E7ETM8 NEXN Nexilin 1 EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK 221.82 5.363499999999999e-64 42123300.0 17849.3 19439.4 16772.2 19600.1 22213.5 19893.9 17400.9 18907.8 18834.1 18522.7 21134.5 True False 19661.347796039838 21077.626460580246 17910.462351431877 20810.753661943196 20653.30039241478 19731.89067420153 18063.100771637837 18530.669096117843 18042.56827434702 17353.173560896248 18535.09048263383 1.0607635184981286 1.1371741875405792 0.9663002383620847 1.1227759412041454 1.1142810665944995 1.064569428063436 0.9745353435723328 0.9997614585955148 0.9734275800407735 0.9362335499335727 1.0 14.177971537518953 -7.6933555123855095 5.218318752777723 0.9873764523581682 1.0801350259403508 0.5432509878682416 0.04567546962828157 0.11930902766993977 6.127475888960132 0.006245034790388799 0.00926377079159147 2.026023542668937e-08 7.6933555123855095 0.09275857358218265 EMLETGPEAERLEQLESGEEELVLAEYES(ph)DEEKK ddPTM_A549_PD325901_60min_R1 1 EMLETGPEAERLEQLESGEEELVLAEYESDEEKK 34 2 F5GXJ8;F6WZM0;F5H235;C9K0E8;B4DMS8;Q96FC9-5;Q96FC9-4;Q96FC9-3;Q96FC9-2;A8MPP1;Q96FC9 F5GXJ8 DDX11;DDX11L8 Probable ATP-dependent RNA helicase DDX11;Putative ATP-dependent RNA helicase DDX11-like protein 8 1 EMLETGPEAERLEQLESGEEELVLAEY(0.11)ES(0.89)DEEKK 64.72 0.00032319 3384700.0 973.02 1257.9 917.11 1079.1 1426.4 1052.6 1155.3 1236.9 1080.4 1484.9 1198.3 True False 1071.8002741005353 1363.907647600434 979.3505996304415 1145.7535561860864 1326.2145848128596 1044.027974588417 1199.2655737044174 1212.229059170721 1034.9945451922058 1391.1431605853807 1050.916696649559 1.0198717724416744 1.297826604095953 0.9319012655833917 1.0902420333018572 1.2619597624064602 0.993445035098306 1.141161404636363 1.1534968119123465 0.9848492734884555 1.3237425621083974 1.0 10.037432599924433 -8.771133149718143 24.983152993018532 0.9928454788611203 1.1128750061612778 0.0 0.14291398915143114 201.72138089676287 519882.3355724221 0.0162533555774309 0.01740776607107924 1.6938184154903005e-09 8.771133149718143 0.12002952730015748 EMLHS(ph)PLPCTGGKPSGDTPDVFISYR ddPTM_A549_PD325901_60min_R1 1 EMLHSPLPCTGGKPSGDTPDVFISYR 26 1 Q6SZW1;Q6SZW1-2 Q6SZW1 SARM1 Sterile alpha and TIR motif-containing protein 1 1 EMLHS(0.998)PLPCT(0.001)GGKPSGDTPDVFISYR 55.846000000000004 0.0012519999999999999 6048300.0 1247.1 1241.1 1613.0 1458.3 1950.3 1881.7 2041.3 2213.6 1965.5 1756.9 2058.9 True False 1373.704673933503 1345.691852640828 1722.4678797569568 1548.3758789604021 1813.317656169743 1866.3760590756463 2118.9827885422205 2169.448011464393 1882.896870210366 1645.9690341655694 1805.6683524424416 0.7607735230422343 0.745259698892421 0.9539226167568682 0.857508454897594 1.0042362728000158 1.0336206294755559 1.1735171553934438 1.2014653790270422 1.042770045597499 0.9115566720428729 1.0 10.818317221653652 -6.201008690446807 0.9717514250524861 1.0481352360181178 0.735761938995567 0.6244697380212989 0.08607153581833418 0.3620469485032881 0.5414049873568814 0.013215119910382473 0.08341899572058713 6.294935862539949e-07 6.201008690446807 -0.3123732970225508 EMLMEDVGS(ph)EEEQEEEDEAPFQEK ddPTM_A549_PD325901_60min_R1 4 EMLMEDVGSEEEQEEEDEAPFQEK 24 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EMLMEDVGS(1)EEEQEEEDEAPFQEK;EMLMEDVGS(1)EEEQEEEDEAPFQEK;EMLMEDVGS(1)EEEQEEEDEAPFQEK;EMLMEDVGS(1)EEEQEEEDEAPFQEK 70.64699999999999 3.0216e-05 5719600.0 1893.8899999999999 1840.8500000000001 1962.6399999999999 1746.96 2265.6800000000003 1781.28 1726.94 2271.06 2347.87 2292.34 2372.04 True False 2086.1563185918717 1995.9848899636377 2095.8365527130773 1854.8657515659766 2106.5464529716783 1766.7738462615016 1792.6596467178276 2225.7619266878946 2249.1971888378607 2147.601261186809 2080.294117600452 1.0028179673930826 0.9594724481872486 1.0074712681159494 0.8916363007868814 1.0126195306467085 0.8492904110594779 0.8617337479113767 1.0699265588729514 1.081191918877429 1.0323546286156853 1.0 11.022571799569945 -8.281136288720077 24.98171989537352 1.041780856993936 0.9413698029066635 0.44492297825098115 0.05642642819605893 627.2329001921937 795521.5080744424 0.00991542556166767 0.011995660069066523 5.2343614797426795e-09 8.281136288720077 -0.10041105408727247 EMLQQSK ddPTM_A549_PD325901_60min_R1 1 EMLQQSK 7 0 P08238;Q58FF7;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha 0 45.081 0.045047000000000004 7748100.0 3036.0 3268.3 3353.8 3674.3 4021.7 3972.2 2921.7 3852.5 3848.1 3448.9 4363.3 False True 3344.212485014927 3543.731111099847 3581.4090360377427 3901.2531660592485 3739.2296661118035 3939.8517201787135 3032.8868923155846 3775.658865272216 3686.3777391282156 3231.1358654070427 3826.641761237606 0.8739288111289905 0.9260681642573565 0.9359143759721709 1.0194978807730128 0.977156969327191 1.0295846765923795 0.7925714194199077 0.9866768568508747 0.9633454002592533 0.8443789795368862 1.0 11.901863131193133 -2.000036924424099 0.009483591829091143 1.796436840782809 2.140100889778394e-06 0.0 0.07766045034102818 17728.59384349834 12.64461376488121 1036.0606882744794 1382.8141187244971 0.00999914981985738 2.000036924424099 -1.7964347006819192 EMPQDLRS(ph)PAR ddPTM_A549_MK2206_60min_R1 8 EMPQDLRSPAR 11 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR 94.68799999999999 0.00023832 616232100.0 12552.17 13317.73 11842.45 11243.02 14707.98 11187.81 10345.87 11783.25 16269.560000000001 15787.970000000001 15919.04 True False 14670.669424907404 13995.545572375968 13521.887483586073 13997.560404718342 12544.455625543296 12371.696628332766 12225.580659889585 13453.561772189685 12584.530637148613 12221.456611778634 11965.90302484691 1.2260394718596759 1.169618836398269 1.1300348544951602 1.1697872175340838 1.0483500994028647 1.033912493076639 1.0217014657818522 1.1243248206385834 1.051699199886305 1.021356815812486 1.0 13.546641655682754 -2.0000000000401097 0.22435685856477725 1.0087666403190099 2.2040377630083876 0.7476931819058681 0.03641495343474676 16.448670862322313 0.19249549657397472 0.02255792490529357 7.267917636706758 0.00999999999907644 2.0000000000401097 1.1952711226893777 EMPQDLRS(ph)PAR ddPTM_A549_PD325901_60min_R1 7 EMPQDLRSPAR 11 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR 84.62 0.00014006 539282500.0 26925.68 27736.99 26371.179999999997 27364.16 27655.31 27025.48 25679.710000000003 27959.04 27667.859999999997 30479.420000000006 33852.46 True False 29659.15521196204 30074.48349027489 28160.886857587764 29054.382014683568 25712.89643124013 26805.393451149353 26656.965416526495 27401.375013757443 26505.076061774897 28554.944219549663 29688.822028424715 0.9990007412071024 1.0129901234033785 0.9485350018476963 0.978630340633464 0.8660800488016012 0.9028783097384361 0.8978788512054989 0.9229525842259009 0.8927628060284227 0.9618079219246405 1.0 14.857632231800782 -5.93823752304904 1.8426487508601557 0.9347639139360685 1.0085057385797156 0.36277827075128144 0.03837061931977183 0.43679299253371917 2.7712945219748195 0.007132722201108501 0.03506592966615009 1.1528225870668278e-06 5.93823752304904 0.07374182464364709 EMPQDLRS(ph)PART(ph)PPSEEDSAEAER ddPTM_A549_MK2206_60min_R1 5 EMPQDLRSPARTPPSEEDSAEAER 24 2 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 EMPQDLRS(1)PART(0.995)PPS(0.005)EEDSAEAER;EMPQDLRS(1)PART(0.973)PPS(0.026)EEDSAEAER;EMPQDLRS(0.991)PART(0.835)PPS(0.15)EEDS(0.024)AEAER;EMPQDLRS(1)PART(0.965)PPS(0.035)EEDSAEAER;EMPQDLRS(1)PART(0.999)PPS(0.001)EEDSAEAER 109.48 2.0442999999999999e-10 154627700.0 5911.9 5688.73 5514.74 5141.139999999999 8157.88 6159.870000000001 5634.889999999999 5629.51 8191.85 8137.87 8706.43 True False 6909.684187922097 5978.2620584696015 6296.813056523904 6400.719530794548 6957.866658678286 6811.703354809221 6658.676573802417 6427.510282151324 6336.409054696375 6299.519515003825 6544.383145756141 1.0558190182374705 0.9134951186875949 0.9621705997771877 0.9780477988892268 1.0631814341723371 1.0408472736237075 1.0174643546230009 0.9821415004284084 0.9682209787495967 0.9625841541824911 1.0 12.67604149906355 -6.539001002040973 24.987667711688246 0.9966771013507987 0.9706806137477506 0.06353187573127461 0.04220242853127311 513.3225305258966 795589.7933768921 0.006028618885516695 0.012551908103496885 2.8906732127519767e-07 6.539001002040973 -0.02599648760304807 EMPQDLRS(ph)PART(ph)PPSEEDSAEAER ddPTM_A549_PD325901_60min_R1 9 EMPQDLRSPARTPPSEEDSAEAER 24 2 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 EMPQDLRS(0.998)PART(0.96)PPS(0.042)EEDS(0.001)AEAER;EMPQDLRS(1)PART(0.977)PPS(0.023)EEDSAEAER;EMPQDLRS(0.992)PART(0.503)PPS(0.443)EEDS(0.062)AEAER;EMPQDLRS(0.999)PART(0.955)PPS(0.045)EEDSAEAER;EMPQDLRS(1)PART(0.908)PPS(0.091)EEDS(0.001)AEAER;EMPQDLRS(1)PART(0.985)PPS(0.013)EEDS(0.002)AEAER;EMPQDLRS(0.997)PART(0.931)PPS(0.066)EEDS(0.006)AEAER;EMPQDLRS(0.999)PART(0.999)PPS(0.002)EEDSAEAER;EMPQDLRS(1)PART(0.991)PPS(0.009)EEDSAEAER 146.83 3.8223e-28 409694000.0 23635.16 23716.65 24678.809999999998 24393.860000000004 27577.3 23940.33 25779.91 25705.15 25719.564000000002 26551.75 30071.499999999996 True False 26034.584043914812 25715.33532909041 26353.662452340217 25900.613329724318 25640.36558452026 23745.367889871126 26760.978582358046 25192.440617949924 24638.66016727308 24875.267973650007 26372.89613894454 0.9871719778803456 0.9750667956075132 0.9992707025234169 0.9820921143156968 0.9722241140842108 0.9003701286642777 1.014715200081512 0.9552398221729068 0.9342417320215911 0.9432133597537282 1.0 14.68676838897216 -6.78592123840176 4.530225528247491 0.9655607877433245 0.9863193766047691 0.13474161909531712 0.02979598660035806 0.4342049255780946 20.925377295901633 0.004775357453570984 0.009568195094231343 1.6371133936685088e-07 6.78592123840176 0.02075858886144455 EMPQDLRS(ph)PARTPPS(ph)EEDSAEAER ddPTM_A549_MK2206_60min_R1 3 EMPQDLRSPARTPPSEEDSAEAER 24 2 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 EMPQDLRS(0.99)PART(0.447)PPS(0.463)EEDS(0.1)AEAER;EMPQDLRS(0.818)PART(0.428)PPS(0.645)EEDS(0.109)AEAER;EMPQDLRS(0.963)PART(0.153)PPS(0.786)EEDS(0.097)AEAER 59.228 0.00023671 34535800.0 2864.29 3376.8900000000003 3107.4 2650.51 5362.4 3813.66 3287.9700000000003 3063.97 4803.43 4414.52 4314.47 True False 3347.7121268328942 3548.759277136623 3548.076045623613 3299.885068985915 4573.598063528324 4217.218969897372 3885.3515888269544 3498.297130514587 3715.460774501511 3417.2768659827047 3243.0680256856695 1.0322670077588336 1.0942598949605205 1.0940492205289023 1.0175195348510253 1.4102689266165935 1.3003794359218663 1.1980481316007823 1.0786998924498217 1.1456623003509048 1.0537172945239726 1.0 11.663143570339889 -10.384393415317666 0.7002099713442625 0.9974583516319914 1.1582816247264185 0.1545864869225223 0.11178110533709482 0.9879382062944467 0.8622692497379709 0.08657473419179358 0.02433482312067977 4.126735031450685e-11 10.384393415317666 0.16082327309442712 EMPQDLRS(ph)PARTPPS(ph)EEDSAEAER ddPTM_A549_PD325901_60min_R1 1 EMPQDLRSPARTPPSEEDSAEAER 24 2 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 EMPQDLRS(0.976)PART(0.398)PPS(0.524)EEDS(0.103)AEAER 80.17399999999999 4.187e-06 27995000.0 2495.3 2551.7 2645.3 2758.4 2973.5 2442.5 2907.1 2609.2 3434.3 2943.3 3040.0 True False 2748.621019057229 2766.7407141919275 2824.825965481138 2928.7801032190714 2764.6516180181134 2422.609089808295 3017.7312813261597 2557.157459122197 3289.9683140999537 2757.45953569328 2666.0992721477587 1.0309522408904874 1.0377485726415183 1.0595351774750355 1.0985262753774738 1.0369649948521844 0.9086717494419055 1.1318900660796223 0.9591381258141224 1.2340006797457388 1.0342673900030448 1.0 11.380514784807222 -8.735755520076836 24.99945882551745 1.1105004009789727 1.0354539786681274 0.07475615383331757 0.07923370686908505 373.7880631813224 363827.65636407235 0.016294437521918493 0.018472981104217398 1.8375724876298904e-09 8.735755520076836 -0.07504642231084535 EMPQDLRS(ph)PARTPPSEEDSAEAER ddPTM_A549_MK2206_60min_R1 3 EMPQDLRSPARTPPSEEDSAEAER 24 2 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 EMPQDLRS(0.999)PART(0.001)PPSEEDSAEAER;EMPQDLRS(0.982)PART(0.018)PPS(0.001)EEDSAEAER;EMPQDLRS(0.998)PART(0.002)PPSEEDSAEAER 79.021 4.4198000000000004e-06 31484100.0 2184.98 3096.3500000000004 2367.73 2348.06 2886.49 1943.46 1894.3200000000002 1958.9099999999999 3684.88 3957.1 4226.8 True False 2553.7512063678373 3253.940989419843 2703.509717289181 2923.3348054084177 2461.891144710181 2149.115647235662 2238.493423524752 2236.5914914102727 2850.2605635442014 3063.1883616746936 3177.168906254577 0.8037820089893618 1.0241636769811426 0.8509178444894918 0.920106828331833 0.7748694568499963 0.6764247387052389 0.7045560023951047 0.7039573775908852 0.8971070307068587 0.9641251227293893 1.0 11.633526074033107 -9.296905958759828 1.780835890476606 0.9681579070057634 0.8124077849750141 0.3064337260064238 0.09831544037729134 0.2987347300503369 1.9519458218340786 0.02335305481662011 0.02067769425192919 5.047705877225638e-10 9.296905958759828 -0.15575012203074934 EMPQDLRS(ph)PARTPPSEEDSAEAER ddPTM_A549_PD325901_60min_R1 3 EMPQDLRSPARTPPSEEDSAEAER 24 2 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 EMPQDLRS(0.88)PART(0.079)PPS(0.035)EEDS(0.005)AEAER;EMPQDLRS(0.979)PART(0.021)PPS(0.001)EEDSAEAER;EMPQDLRS(0.981)PART(0.016)PPS(0.002)EEDSAEAER 64.152 0.00012853 36307100.0 3804.74 4368.1 4030.15 4533.38 5032.57 5594.85 4012.27 5273.83 6232.0 5391.24 5452.54 True False 4190.994403898449 4736.215116848284 4303.660214260693 4813.396586547014 4679.099644623983 5549.287396566604 4164.959130448387 5168.639323410404 5970.090712363776 5050.836186325223 4781.912146498863 0.8764264744945048 0.9904437747389323 0.8999873026549999 1.0065840691095094 0.9784997091696561 1.1604745605018245 0.8709819425473583 1.080872915491492 1.2484735247038892 1.0562377625492883 1.0 12.223371909698098 -7.108393439691509 0.7309210788621966 1.1095924508508694 0.9202582351047015 0.26424298904963717 0.09576606961008746 0.7185868247703402 0.7255241594886287 0.021654319728127765 0.06689042344495891 7.791239602124938e-08 7.108393439691509 -0.18933421574616793 EMPS(ph)LPR ddPTM_A549_MK2206_60min_R1 1 EMPSLPR 7 0 Q13393-4;Q13393-2;Q13393;Q13393-3;I3L1F3;O14939-3;O14939-4;O14939 Q13393-4;I3L1F3 PLD1;PLD2 Phospholipase D1;Phospholipase D2 1 EMPS(1)LPR 63.419 0.026542000000000003 2888200.0 717.16 755.57 761.25 828.36 1354.3 1049.0 665.8 1055.8 1275.3 1236.2 1358.7 True False 838.1990751214013 794.0252856995984 869.2066968304615 1031.3082371864941 1155.0842640303622 1160.004483730156 786.7672417452069 1205.4628832518933 986.4465862356221 956.9415614218127 1021.2972917876637 0.820719962601908 0.7774673369687961 0.8510809769298565 1.0098021853962889 1.1309970890146197 1.135814706508916 0.770360646279656 1.180325154041943 0.965876042331377 0.936986290981734 1.0 9.996187169444651 -6.167552606930925 3.7684982318366975 1.0051785740532395 0.8025702704357524 0.4096092976723843 0.107133582105587 0.1738592008148532 4.548465788119646 0.013971118360483452 0.03973317142128567 6.799036819664596e-07 6.167552606930925 -0.20260830361748716 EMPS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 EMPSLPR 7 0 Q13393-4;Q13393-2;Q13393;Q13393-3;I3L1F3;O14939-3;O14939-4;O14939 Q13393-4;I3L1F3 PLD1;PLD2 Phospholipase D1;Phospholipase D2 1 EMPS(1)LPR;EMPS(1)LPR 69.825 0.021726 6608100.0 1522.9099999999999 1693.77 1738.6 1449.27 1773.22 1435.24 1805.01 1784.6399999999999 1750.49 1848.99 1975.4899999999998 True False 1677.5147020929123 1836.5099421863326 1856.591851051112 1538.788116369019 1648.675144476907 1423.551881292306 1873.700643289371 1749.0439551770032 1676.9229927929503 1732.2444558493924 1732.5172536628868 0.9682528116509731 1.0600240420714915 1.071615216025068 0.8881805437237142 0.9516067681238263 0.8216667847218454 1.0814903224357475 1.0095391266546845 0.9679112801027527 0.9998425425126833 1.0 10.758654004499288 -6.222296816898049 24.98964612489364 0.9740027643585064 1.0359700168168324 0.15525349220403006 0.06855996613613276 826.9137266620997 527922.6351033023 0.009263827152662133 0.024509444258702565 5.993812913936607e-07 6.222296816898049 0.061967252458326016 EMQPTHPIR ddPTM_A549_PD325901_60min_R1 1 EMQPTHPIR 9 0 P63104;E7EX29;B0AZS6;P63104-2;H0YB80;B7Z2E6;P27348;P31946-2;P31946 P63104;P27348;P31946-2 YWHAZ;YWHAQ;YWHAB 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed 0 76.572 0.0022748 30484000.0 1552.8 1306.1 1365.4 1498.5 1458.2 1447.9 1238.5 1401.9 1531.4 1476.4 1702.9 False True 1710.4391128890584 1416.169630758349 1458.0642548172032 1591.0589416595787 1355.7810625169043 1436.1087824497147 1285.631795233205 1373.9380047307254 1467.040583586953 1383.1798520359994 1493.4540955725065 1.1452907176456415 0.9482511949692495 0.9763033622123237 1.0653551028963204 0.9078156915142236 0.9616022258114275 0.8608445341872834 0.9199733750129325 0.9823138106059912 0.9261616116200517 1.0 10.544437178750236 -5.256148978961425 24.130684355368945 0.9733434263208092 1.145290837993525 0.47965397269254284 0.05398467826353575 242.6076285375896 1106527.4867752898 0.007399460159690355 0.08585489358464858 5.54435488592614e-06 5.256148978961425 0.17194741167271577 EMS(ph)SDSEYDSDDDRTKEER ddPTM_A549_MK2206_60min_R1 1 EMSSDSEYDSDDDRTKEER 19 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 EMS(0.327)S(0.327)DS(0.327)EY(0.016)DS(0.002)DDDRTKEER 52.50899999999999 0.0050458 1564900.0 202.75 275.53 290.57 113.22 182.3 0.0 119.54 208.58 177.78 381.75 590.57 True False 236.9692432384183 289.5533001162174 331.77719526834466 140.95890508263895 155.48391149134977 0.0 141.25887064917697 238.1468537494601 137.51311385632317 295.5124098631104 443.91517009718126 0.5338165018927858 0.6522716942807536 0.7473887301389418 0.31753567928705934 0.3502559091578498 0.0 0.31821140651321467 0.5364692846548257 0.3097734051895974 0.6656956773935373 1.0 8.794140201096015 -10.774137960270645 0.9080802144418312 1.0179981344650135 0.41244606561657576 0.32173987980470686 0.21344038935862314 0.4042051802641447 0.5626811424746363 0.16783236839598575 0.03767398934772689 1.6821396188643228e-11 10.774137960270645 -0.6055520688484377 EMS(ph)SDSEYDSDDDRTKEER ddPTM_A549_PD325901_60min_R1 1 EMSSDSEYDSDDDRTKEER 19 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 EMS(0.47)S(0.47)DS(0.054)EY(0.007)DSDDDRTKEER 49.224 0.006773100000000001 2626200.0 340.84 290.06 243.55 311.25 393.91 297.73 187.37 329.6 300.11 317.69 374.66 True False 375.44182588685345 314.5043741656587 260.0787675851253 330.47520559996235 366.2431205157276 295.30538559206707 194.50046788279818 323.0258694338022 287.4974203606376 297.63099918268546 328.5791951654212 1.142622026625391 0.957164600781627 0.7915253656099263 1.00577033014396 1.114626628540327 0.898734277571644 0.5919439536787413 0.9830989733576309 0.8749714668206512 0.9058120646769645 1.0 8.36009732501739 EMTDATNEEETEIKEDTKVPS(ph)PK ddPTM_A549_MK2206_60min_R1 3 EMTDATNEEETEIKEDTKVPSPK 23 2 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 EMTDATNEEETEIKEDT(0.033)KVPS(0.967)PK;EMTDATNEEETEIKEDT(0.06)KVPS(0.94)PK;EMT(0.001)DAT(0.004)NEEET(0.023)EIKEDT(0.15)KVPS(0.822)PK 113.47 1.6149e-12 71968000.0 8391.300000000001 9569.1 8195.9 8127.6 12403.3 9405.9 8044.900000000001 8021.2 12861.199999999999 14120.9 12930.800000000001 True False 9807.546292412027 10056.126317069264 9358.201860824676 10118.86236486183 10578.791000552155 10401.226094868895 9506.55419512769 9158.229663894756 9948.158735116122 10930.978882609026 9719.72548807531 1.0090353173496989 1.0346101162431665 0.9628051607327625 1.0410646244357624 1.0883837216936625 1.0701152113431276 0.9780681776240338 0.9422313083976057 1.0235020266077541 1.1246180662221117 1.0 13.246699853371235 -7.774921774659574 24.997562471256547 1.0028674177158845 1.0338593734278874 0.01914403747496274 0.05183345611101892 379.72976772044206 704051.9982451452 0.0061875615402416095 0.008574251963703577 1.6791064323810262e-08 7.774921774659574 0.03099195571200286 EMTDATNEEETEIKEDTKVPS(ph)PK ddPTM_A549_PD325901_60min_R1 4 EMTDATNEEETEIKEDTKVPSPK 23 2 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 EMTDATNEEETEIKEDT(0.002)KVPS(0.998)PK;EMTDATNEEETEIKEDT(0.032)KVPS(0.968)PK;EMTDATNEEETEIKEDT(0.013)KVPS(0.987)PK;EMTDATNEEETEIKEDT(0.051)KVPS(0.948)PK 135.02 6.2704e-23 148708000.0 15199.9 14790.5 15040.1 14752.6 17449.2 14481.4 14821.9 15276.2 15793.3 17252.899999999998 16959.899999999998 True False 16742.982658425026 16036.947342264262 16060.811629468448 15663.834596414476 16223.62838847206 14363.46827969287 15385.955515354894 14971.504207052936 15129.562523680173 16163.548949601674 14873.939817664079 1.125658894931207 1.0781909526902222 1.0797953888716731 1.053105955008123 1.0907418335258496 0.9656801396113638 1.034423676844702 1.0065594180549924 1.0171859446219165 1.0867025917642932 1.0 13.860499219445149 -6.225864131755253 0.5374337694522735 1.0058740703945313 1.1335940165882572 0.4103408064735474 0.0352856369581438 0.71870993253742 0.24881362470524104 0.004767594964164101 0.047446904379110755 5.944781109305836e-07 6.225864131755253 0.12771994619372595 EMVELPLR ddPTM_A549_MK2206_60min_R1 2 EMVELPLR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 79.597 0.01126 2200970.0 592.99 612.3199999999999 444.11 415.35 583.86 650.9 712.6 603.25 984.8100000000001 853.13 814.6500000000001 False True 693.0722147864348 643.4844725698191 507.0914760320215 517.1107686457701 497.97496743466525 719.7778059675483 842.0701959561947 688.7625348756434 761.7521074184136 660.4073404754824 612.3499218037981 1.1318237989560824 1.050844377793514 0.8281073581887346 0.8444693960644558 0.8132196146408923 1.1754354501218847 1.3751454290640064 1.124785862382013 1.2439817174704975 1.0784803213987872 1.0 9.25821249331874 -7.276182541527709 24.612965996280995 1.1441188053871725 0.9293785969230187 0.45022738189538036 0.12666182537174286 584.7266711936467 976170.2942759293 0.022200474464945677 0.0355838743131365 5.294408639101484e-08 7.276182541527709 -0.21474020846415376 EMVELPLR ddPTM_A549_PD325901_60min_R1 2 EMVELPLR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 109.86 0.0045407 3027100.0 1501.99 1583.29 1438.31 1479.88 1945.8 1590.37 1330.9299999999998 2145.8 1513.83 1853.0500000000002 2172.5 False True 1654.470919093403 1716.7194048567378 1535.9223658606509 1571.2888265486667 1809.1337206455848 1577.4185540054918 1381.579269462842 2103.0003356524653 1450.2089895856318 1736.048106756509 1905.2962726121737 0.8683536218884806 0.9010249112087456 0.8061330869843624 0.8246952713524283 0.9495288195600418 0.8279124757027109 0.7251256874442354 1.1037655223926084 0.7611461852058241 0.9111696336740195 1.0 10.895799638178037 -11.088654696941276 1.3992906421063738 1.0004266345121848 0.8525564172015019 0.08483333467506149 0.09999917553385354 0.49457620854124984 1.7215451687476184 0.0686055383913199 0.014838315983881644 8.153523045688029e-12 11.088654696941276 -0.14787021731068295 EMVQNLMVLR ddPTM_A549_PD325901_60min_R1 1 EMVQNLMVLR 10 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 75.294 0.004305399999999999 2025800.0 2473.7 2296.4 2638.9 2894.7 2581.6 2397.8 2730.8 3143.7 3431.3 2737.9 2722.8 False True 2724.828202958309 2489.9256872165024 2817.9916229948126 3073.499044659313 2400.277322036512 2378.2731117880576 2834.722088351098 3080.9964373150583 3287.0943936671747 2565.0285267470617 2387.9128612512895 1.1410919749937911 1.0427204977286135 1.1801065561153508 1.2871068683171167 1.0051779363417572 0.9959631066863216 1.187112869296946 1.2902465945514385 1.3765554208476039 1.0741717456988618 1.0 11.221534475982406 -7.956813719768848 24.99745918221102 1.1934786411879001 1.1106119814384303 0.0899505892968091 0.12072816606213796 345.9008012493313 200216.61882033682 0.0248760765423059 0.03437123148246058 1.1045522895976208e-08 7.956813719768848 -0.08286665974946983 ENAAAES(ph)GSESSSQEATPEK ddPTM_A549_MK2206_60min_R1 1 ENAAAESGSESSSQEATPEK 20 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7ESQ0 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 ENAAAES(0.79)GS(0.135)ES(0.025)S(0.025)S(0.025)QEAT(0.001)PEK 54.288000000000004 0.0093514 1275500.0 0.0 0.0 284.99 175.26 547.86 197.83 299.97 346.19 394.2 255.11 323.24 True False 0.0 0.0 325.40586736251356 218.19870786772037 467.27051974575346 218.76423929107403 354.4706661254277 395.26349266241033 304.91432940804714 197.48047381841022 242.97058702984043 0.0 0.0 1.3392809036698292 0.8980457697989687 1.9231567304414736 0.9003733413386638 1.4589036082869298 1.6267956442557636 1.2549433786839355 0.8127752261394366 1.0 7.924637867743565 -5.757839492416683 24.999999999999996 1.213932088874662 2.1063717476111253e-05 0.6865577859084979 0.324129392758896 34.294595582387196 238153.155056794 0.040704195802764104 0.14613384066915114 1.7464674972536335e-06 5.757839492416683 -1.213911025157186 ENAAAPS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 ENAAAPSPVR 10 0 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 ENAAAPS(1)PVR;ENAAAPS(1)PVR 80.312 0.0011981 14876000.0 2515.8 4073.7000000000003 3470.0 5643.7 4623.6 3192.0 3428.6 3494.4 3841.4 3539.4 4682.0 True False 2940.405534595377 4281.0339298204735 3962.0981779989547 7026.4067533553225 3943.474564845882 3529.775321321882 4051.5322394827485 3989.7419011511815 2971.3290334552803 2739.847081779942 3519.330183373694 0.8355014680028262 1.2164342948113485 1.1258103024027188 1.996518197283689 1.1205184962399848 1.0029679334998272 1.1512225418982642 1.1336651275290521 0.8442882249277646 0.7785137906990798 1.0 11.781085158672758 -7.973538548666463 1.114834241673276 0.9326318618572403 1.2665813934712653 0.20106697075268432 0.27997565772781247 0.5451661304598157 1.3549934642626977 0.05102822485736327 0.0766022360363027 1.0628242411248161e-08 7.973538548666463 0.33394953161402496 ENAAAPS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 ENAAAPSPVR 10 0 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 ENAAAPS(1)PVR;ENAAAPS(1)PVR 106.49 2.8274999999999996e-07 10753000.0 2125.4 2554.0 2347.8 3476.0 2251.6 1984.0 1999.6 2144.9 2311.5 1879.2 2270.8 True False 2341.1690433632166 2769.234543263779 2507.1358264683104 3690.7046254312268 2093.4553835983147 1967.842961793103 2075.695872223105 2102.1182868585024 2214.3556934577787 1760.5469912937226 1991.5059957872156 1.1755772005284795 1.3905228249986452 1.258914525877324 1.8532229545070191 1.0511921068913477 0.9881180202097464 1.0422744780151216 1.0555420326653666 1.1119000887478994 0.8840279642732394 1.0 10.95964410786379 -6.9195528746609725 24.999998887758554 1.0481637575684999 1.4117892298563075 0.5635502389670468 0.1682801403694378 16.725967947053366 5196.692398459495 0.021641239374641588 0.04089810101156506 1.20350285631673e-07 6.9195528746609725 0.3636254722878076 ENAAAPS(ph)PVRAPAPSPAKEER ddPTM_A549_MK2206_60min_R1 2 ENAAAPSPVRAPAPSPAKEER 21 2 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 ENAAAPS(1)PVRAPAPSPAKEER;ENAAAPS(1)PVRAPAPSPAKEER 123.14 1.0379000000000002e-15 31789000.0 3114.3 3236.5 3336.5 2863.1000000000004 3547.3 2713.3 2632.0 2509.8999999999996 4214.7 4586.8 4988.1 True False 3639.917702675246 3401.224025790793 3809.6658705744967 3564.5596285294446 3025.4968690798964 3000.419605057229 3110.2003308401677 2865.686011246378 3260.077179492886 3550.638694329049 3749.417105443469 0.9707956197753378 0.907134077148375 1.0160688350846743 0.9506970092376105 0.8069245922752706 0.800236282248024 0.8295156936060073 0.7643017382851124 0.8694890666498132 0.9469841830011844 1.0 11.872450612417268 -6.548750148155246 24.933816948460457 0.8963965400983578 0.962991357347052 0.22233364817037893 0.07335410286770892 398.0345747855694 383608.4244656208 0.013437132602962533 0.02797226418691237 2.826505610439306e-07 6.548750148155246 0.0665948172486942 ENAEQGEVDMES(ph)HR ddPTM_A549_MK2206_60min_R1 2 ENAEQGEVDMESHR 14 0 P14209-3;P14209 P14209-3 CD99 CD99 antigen 1 ENAEQGEVDMES(1)HR;ENAEQGEVDMES(1)HR 69.01 0.0010709 63033400.0 521.07 419.5 270.27 358.40200000000004 552.38 354.97 306.32 653.05 774.6 557.6 522.82 True False 609.0138770616161 440.8507581706284 308.59835001953223 446.2105060892771 471.12563373336116 392.53268978998426 361.9743789296961 745.6218373817476 599.1543367820226 431.6377727299814 392.9893649020581 1.5496955680044833 1.121788011440204 0.7852587819938638 1.1354264159298124 1.1988254029489485 0.9988379453673315 0.9210793249326438 1.897307927321579 1.5246070003226309 1.098344665987476 1.0 8.618346460501183 ENAEQGEVDMES(ph)HR ddPTM_A549_PD325901_60min_R1 4 ENAEQGEVDMESHR 14 0 P14209-3;P14209 P14209-3 CD99 CD99 antigen 1 ENAEQGEVDMES(1)HR;ENAEQGEVDMES(1)HR;ENAEQGEVDMES(1)HR;ENAEQGEVDMES(1)HR 93.696 1.3807e-05 117917600.0 616.9 884.6499999999999 546.0799999999999 1341.5500000000002 1036.6 739.47 647.1500000000001 886.62 753.8 1023.82 1025.1 True False 679.5272338622225 959.2025601794453 583.1402726458023 1424.4144966188899 963.7927920758627 733.4480014904968 671.7776473840681 868.9356685600651 722.1204074101119 959.1758304737859 899.0191986442989 0.755853973849429 1.0669433551874106 0.6486405112651265 1.5844094305960046 1.0720491770690115 0.8158312999283222 0.7472339282599237 0.9665373886012678 0.80323135312244 1.066913623113057 1.0 9.812208114739336 -7.251145061942941 24.117663856853948 0.8908488229744904 1.0379823747940353 0.0636652762258959 0.23632346650377636 896.4375509171686 2100182.84364925 0.03322525997482737 0.05710344811724773 5.608606075023626e-08 7.251145061942941 0.1471335518195449 ENAEQGEVDMES(ph)HRNANAEPAVQR ddPTM_A549_MK2206_60min_R1 4 ENAEQGEVDMESHRNANAEPAVQR 24 1 P14209-3;P14209 P14209-3 CD99 CD99 antigen 1 ENAEQGEVDMES(1)HRNANAEPAVQR;ENAEQGEVDMES(1)HRNANAEPAVQR;ENAEQGEVDMES(1)HRNANAEPAVQR;ENAEQGEVDMES(1)HRNANAEPAVQR 165.34 1.1509e-34 43955300.0 1688.6 1288.53 1805.52 2078.19 1769.55 1229.2 992.6999999999999 1058.8899999999999 1632.35 1746.61 2772.72 True False 1973.5943976936767 1354.1106732433843 2061.5698854007696 2587.3466432934956 1509.2515391087113 1359.2731281230765 1173.060740283068 1208.990900214621 1262.6253313273091 1352.049587926672 2084.1771008209985 0.9469417915186953 0.6497099851591179 0.9891529297527915 1.24142360180154 0.7241474529751754 0.6521869603056439 0.5628411999253693 0.580080694552481 0.6058147989582728 0.6487210647281716 1.0 11.025262159025319 ENAEQGEVDMES(ph)HRNANAEPAVQR ddPTM_A549_PD325901_60min_R1 4 ENAEQGEVDMESHRNANAEPAVQR 24 1 P14209-3;P14209 P14209-3 CD99 CD99 antigen 1 ENAEQGEVDMES(1)HRNANAEPAVQR;ENAEQGEVDMES(1)HRNANAEPAVQR;ENAEQGEVDMES(1)HRNANAEPAVQR;ENAEQGEVDMES(1)HRNANAEPAVQR 206.03 1.7034999999999997e-62 61229600.0 1704.8399999999997 1778.31 2055.99 2157.7200000000003 2049.74 1981.21 1761.0800000000002 2097.79 1894.83 2035.77 2092.7000000000003 True False 1877.9141017631257 1928.174424679487 2195.5218450722277 2290.9974638623316 1905.7733336191177 1965.0756826280824 1828.0988630999539 2055.9479327655813 1815.1968845488207 1907.2311347733194 1835.3111667182961 1.023212922046896 1.0505981000089695 1.1962668156147174 1.2482883041347392 1.0383924907005357 1.0707043678821053 0.9960702556879014 1.1202176339622036 0.9890403967816305 1.0391867980532274 1.0 10.84180896932371 -7.898925295375168 0.8345328578055504 0.9965049051223049 1.1197583829146933 0.20000783591502236 0.07220440379986855 0.4954584680026331 0.6945470356683257 0.014645016854674587 0.024218288268741298 1.2620446049527176e-08 7.898925295375168 0.12325347779238838 ENALSSGTLQEEQRT(ph)PPPGQDTQQFHEK ddPTM_A549_MK2206_60min_R1 2 ENALSSGTLQEEQRTPPPGQDTQQFHEK 28 1 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 ENALS(0.001)S(0.001)GT(0.001)LQEEQRT(0.998)PPPGQDTQQFHEK;ENALSSGTLQEEQRT(1)PPPGQDTQQFHEK 163.48 3.4666e-46 57176000.0 8016.1 10097.099999999999 8722.3 10106.0 12706.8 8744.5 7749.200000000001 8094.4 12269.0 12023.6 12074.3 True False 9369.021705171319 10610.999261798925 9959.25329624215 12581.970453675574 10837.646552596176 9669.837185870685 9157.129332730487 9241.805988060356 9490.091089567048 9307.46040924713 9075.918076272743 1.0322946534373023 1.1691378406708361 1.0973273681566957 1.3863027792823226 1.1941102224059443 1.0654390117458894 1.0089479935556112 1.0182778106185528 1.0456342829247303 1.0255117257591506 1.0 13.147827871251836 -7.388762939903586 3.8339880479369675 1.021461470000361 1.1824088030686082 0.4566402208616491 0.08153054296277935 0.1641813308698253 4.26271087609064 0.012265064532904624 0.019992799226491224 4.085423287372038e-08 7.388762939903586 0.16094733306824716 ENALSSGTLQEEQRT(ph)PPPGQDTQQFHEK ddPTM_A549_PD325901_60min_R1 2 ENALSSGTLQEEQRTPPPGQDTQQFHEK 28 1 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 ENALSSGTLQEEQRT(1)PPPGQDTQQFHEK;ENALSSGTLQEEQRT(1)PPPGQDTQQFHEK 210.75 7.2669e-90 106378000.0 6826.5 11881.3 6187.6 15121.199999999999 11212.6 8581.7 7765.599999999999 9219.4 7933.799999999999 8966.6 10505.900000000001 True False 7519.521254596307 12882.57884842598 6607.527745061466 16055.202181263143 10425.065657370069 8511.81348045357 8061.124157499369 9035.51183452062 7600.369976532689 8400.447345750474 9213.740902387222 0.8161203287850265 1.3981920031078998 0.7171384365008024 1.742528073163349 1.1314693746889497 0.9238173257344595 0.8749024140032832 0.9806561667237218 0.8248951275115063 0.9117303638931251 1.0 13.169571313459782 -7.226736374324821 5.281893007296323 0.9172943355349517 1.1841123366040955 0.17729484415995223 0.2582756500916365 0.23720499391598512 18.116627701866406 0.034979410930409995 0.06034335742457444 5.9328535169739e-08 7.226736374324821 0.2668180010691439 ENARS(ph)PSSVTGNALWK ddPTM_A549_MK2206_60min_R1 2 ENARSPSSVTGNALWK 16 1 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 ENARS(0.993)PS(0.006)S(0.001)VTGNALWK;ENARS(0.996)PS(0.003)S(0.001)VTGNALWK 114.02 5.4722e-08 36145000.0 3809.0 3468.4 3133.6 2747.7 5413.6 3936.9 3880.7 3045.0 5091.3 6515.6 6422.8 True False 4451.866078890924 3644.926745265807 3577.9915995900606 3420.8866233489393 4617.266611352554 4353.50014489728 4585.77295740556 3476.6380749213995 3938.128679135436 5043.721434719275 4827.841499737844 0.9221234953824942 0.7549806151390284 0.7411162109991284 0.7085747582091699 0.9563832225236216 0.9017487722274392 0.9498598820310425 0.7201226625004536 0.8157120898333716 1.044715621876392 1.0 12.2371625971892 -10.682329821133917 0.7919704703045995 1.0085152441660752 0.8272414887865949 0.39856140340674495 0.08935451343741777 0.6864776215508414 0.711168976227281 0.07786454489669299 0.017246537959688665 2.0781178792830383e-11 10.682329821133917 -0.18127375537948032 ENARS(ph)PSSVTGNALWK ddPTM_A549_PD325901_60min_R1 2 ENARSPSSVTGNALWK 16 1 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 ENARS(0.985)PS(0.013)S(0.001)VTGNALWK;ENARS(0.995)PS(0.005)SVTGNALWK 150.94 2.2204e-15 55496000.0 11593.3 8734.4 8235.7 8090.9 7677.700000000001 9006.0 7573.700000000001 6306.0 12353.0 9650.0 12998.599999999999 True False 12770.243281463616 9470.478541379469 8794.624127287274 8590.65651723288 7138.444838627101 8932.658121929788 7861.921297987663 6180.221883038704 11833.846368714652 9040.697353120697 11399.85460491443 1.120211066197144 0.8307543271031531 0.7714680960488697 0.7535759722347233 0.626187358174704 0.7835764956229315 0.6896510148996481 0.5421316409048266 1.0380699385072096 0.7930537420383669 1.0 13.47672780375468 -8.796756857450694 24.99911102700136 1.0179775700537181 0.7602626378599647 0.17147770949085328 0.1528834373254279 120.77639040248754 85489.7910287802 0.0236747957129371 0.025204213014382245 1.5967728605583306e-09 8.796756857450694 -0.2577149321937534 ENAS(ph)PAPGTTAEEAMSR ddPTM_A549_MK2206_60min_R1 2 ENASPAPGTTAEEAMSR 17 0 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 ENAS(0.997)PAPGTT(0.003)AEEAMSR;ENAS(0.938)PAPGT(0.031)T(0.031)AEEAMSR 135.89 7.667e-13 57074000.0 2459.42 2023.0700000000002 2333.87 2529.67 3481.66 2530.98 2608.59 3176.3 3758.69 3329.3 3200.16 True False 2874.5099689540343 2126.035621769376 2664.8478601401757 3149.4392635612016 2969.512426127115 2798.806623671447 3082.537036864115 3626.550252010789 2907.3527163945523 2577.208817700731 2405.47195207714 1.1949879384259197 0.8838330540223224 1.1078274505919983 1.3092812247682377 1.2344822493411 1.1635166318421049 1.2814687089584749 1.5076252495395925 1.2086412871636416 1.071394249879029 1.0 11.232104262284206 -4.852218823713811 20.49583654316418 1.1500404548552083 49.23781902569757 0.0 0.16028090607154663 10311.4049208691 1425016.0242849295 0.023780780726355488 83029.57547154433 1.4053392511633585e-05 4.852218823713811 48.08777857084236 ENAS(ph)PAPGTTAEEAMSR ddPTM_A549_PD325901_60min_R1 3 ENASPAPGTTAEEAMSR 17 0 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 ENAS(0.975)PAPGT(0.012)T(0.012)AEEAMS(0.001)R;ENAS(0.903)PAPGT(0.047)T(0.047)AEEAMS(0.003)R;ENAS(0.983)PAPGT(0.015)T(0.002)AEEAMSR 125.94 1.618e-10 93722000.0 6209.15 7135.41 6215.429999999999 5391.35 6934.049999999999 5739.01 6108.299999999999 5932.36 6866.99 7189.039999999999 7765.139999999999 True False 6839.498337065364 7736.736042423578 6637.246456216853 5724.3614448557655 6447.026249173872 5692.273405322701 6340.754699090011 5814.034425953613 6578.394290900982 6735.122787510758 6810.077007278107 1.0043202638906745 1.1360717410618302 0.9746213514360345 0.8405722047985641 0.9466891846132969 0.8358603580017113 0.9310841407980381 0.8537398945327641 0.9659794278200496 0.9889936311017858 1.0 12.733455396759947 -5.917358514061644 7.288888326441 0.9482193172262772 1.0687231746329497 0.39230669867453316 0.06523071309761423 0.20185625276856572 15.052060824341726 0.009833987578749585 0.03093857542175149 1.209599186110516e-06 5.917358514061644 0.12050385740667258 ENDFAQSGQDAVPES(ph)PSKLSSK ddPTM_A549_MK2206_60min_R1 2 ENDFAQSGQDAVPESPSKLSSK 22 1 O60285;F8VZ96 O60285 NUAK1 NUAK family SNF1-like kinase 1 1 ENDFAQSGQDAVPES(0.964)PS(0.024)KLS(0.005)S(0.007)K;ENDFAQSGQDAVPES(0.944)PS(0.043)KLS(0.006)S(0.007)K 111.79 3.5546999999999996e-11 8767300.0 3333.3999999999996 4121.5 3657.1 3306.0 5173.5 3567.9 3305.7 3479.8999999999996 5797.0 5410.299999999999 5617.5 True False 3895.996426194543 4331.266745650165 4175.731771400566 4115.9701484119805 4412.485003294009 3945.4528098196574 3906.3029003261195 3973.1864817467936 4483.98875590677 4188.109472383459 4222.519714887171 0.9226709853973166 1.0257540611070657 0.988919425687547 0.9747663542932593 1.0449886089902873 0.9343835141631974 0.9251118204501975 0.940951552633061 1.0619225151507874 0.9918507799069847 1.0 12.043888443628015 -8.760577586121576 24.999999913318003 1.0292411873347085 0.9722187589675622 0.19752730072117652 0.04139745088572993 22.96404412672155 666169.7650200176 0.007416169044742956 0.00817618093185012 1.7354911920221339e-09 8.760577586121576 -0.05702242836714633 ENDFAQSGQDAVPES(ph)PSKLSSK ddPTM_A549_PD325901_60min_R1 2 ENDFAQSGQDAVPESPSKLSSK 22 1 O60285;F8VZ96 O60285 NUAK1 NUAK family SNF1-like kinase 1 1 ENDFAQSGQDAVPES(0.971)PS(0.027)KLS(0.001)SK;ENDFAQSGQDAVPES(0.951)PS(0.049)KLS(0.001)SK 137.9 7.184899999999999e-23 13267900.0 4873.8 4576.8 4745.5 4757.1 5749.799999999999 4980.200000000001 4937.0 5730.1 6156.200000000001 5958.4 5716.299999999999 True False 5368.584588098076 4962.502998280996 5067.5581670096935 5050.935262842028 5345.953883733157 4939.6429023800465 5124.880236630061 5615.808660323514 5897.47632276218 5582.185607133093 5013.231338611264 1.0708830743057731 0.9898811092279813 1.0108366888996347 1.0075208825773456 1.0663688792015855 0.9853211569024456 1.022270844985527 1.1201973898693398 1.1763822421958816 1.1134905273849656 1.0 12.291525094359153 -8.237693517111035 20.022356315449052 1.088386795036361 1.0199682310137488 0.3930645748355216 0.046993382723461076 82.79727429090978 69813.08729960641 0.010826723643254618 0.013965846995456143 5.785041554655864e-09 8.237693517111035 -0.06841856402261226 ENDLYVLPPLQEEEKHS(ph)S(ph)EEEDEKEWQER ddPTM_A549_PD325901_60min_R1 1 ENDLYVLPPLQEEEKHSSEEEDEKEWQER 29 2 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;P28715-3 A0A494C0S2 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 2 ENDLY(0.006)VLPPLQEEEKHS(0.997)S(0.997)EEEDEKEWQER 44.968 0.0095518 7824900.0 1151.4 1034.9 1283.4 1347.9 1208.1 1333.5 1152.5 850.67 1225.8 1767.6 1513.6 True False 1268.289280384119 1122.1146549818657 1370.4992417111453 1431.156721696994 1123.2472237187435 1322.640418120515 1196.3590181721988 833.7027195122948 1174.2838888343254 1655.9934343394964 1327.4367955009373 0.9554423115908146 0.8453243565230624 1.032440298744286 1.078135491307453 0.8461775562691568 0.9963867376611237 0.9012549766791169 0.6280545501962517 0.8846250855892417 1.2475120773750823 1.0 10.374427454928307 -6.7882921327078956 24.995322958755075 0.9147032745160188 0.9722710799664875 0.017923792393792937 0.14890038397274366 591.1290024837675 550238.6457912365 0.01744902867445383 0.03298158983763262 1.628200438211562e-07 6.7882921327078956 0.05756780545046869 ENDMS(ph)PSNNVVPIHVPPTTENKPK ddPTM_A549_MK2206_60min_R1 1 ENDMSPSNNVVPIHVPPTTENKPK 24 1 H3BSC1;P62491;B4DQU5 H3BSC1 RAB11A Ras-related protein Rab-11A 1 ENDMS(0.755)PS(0.245)NNVVPIHVPPTTENKPK 40.836999999999996 0.026724 5979500.0 1047.1 1153.7 1333.7 1215.7 1679.6 1385.4 991.33 1338.2 1870.4 1851.9 1679.4 True False 1223.8248808628744 1212.4184021488772 1522.8387146966002 1513.5465545748473 1432.5330649526666 1532.0021084459072 1171.4418290166354 1527.8939480656227 1446.7573864150459 1433.5545037995912 1262.358630917937 0.9694747997032804 0.9604389532848163 1.2063439639092517 1.1989830128338856 1.134806725970563 1.213602910396308 0.9279786269333061 1.2103485575684614 1.1460747769934614 1.1356158770484797 1.0 10.301906116967453 -5.726823924916376 24.755926834434266 1.0998542920121117 0.9649565060873253 0.28678617433936726 0.09070639159994331 189.9023722385126 135809.54065724718 0.013409913392563947 0.05193136490691481 1.8757548372024805e-06 5.726823924916376 -0.1348977859247864 ENDMS(ph)PSNNVVPIHVPPTTENKPK ddPTM_A549_PD325901_60min_R1 3 ENDMSPSNNVVPIHVPPTTENKPK 24 1 H3BSC1;P62491;B4DQU5 H3BSC1 RAB11A Ras-related protein Rab-11A 1 ENDMS(0.801)PS(0.199)NNVVPIHVPPTTENKPK;ENDMS(0.832)PS(0.168)NNVVPIHVPPTTENKPK;ENDMS(0.5)PS(0.5)NNVVPIHVPPTTENKPK 72.10300000000001 3.2436e-05 22146500.0 5292.5 5450.6 5012.8 5572.7 5920.5 7052.9 5245.200000000001 5731.5 6130.1 6540.7 6957.3 True False 5829.790703867426 5909.941190882364 5352.998752415174 5916.913022480034 5504.664504616193 6995.463520781538 5444.808956283574 5617.180736225229 5872.473214996982 6127.719085757152 6101.596205958425 0.9554533776218145 0.968589364388141 0.8773112103334174 0.9697319886068433 0.9021679440603907 1.146497290979403 0.8923581260533965 0.9206084025586375 0.9624486801113296 1.0042813190052164 1.0 12.574970992448687 -8.384018489600846 0.006753451717407819 1.93131971104836 3.1767952857833525e-07 0.06139787181064427 0.06832150393158153 4735.706829764812 24.40456384997731 3476.094014400453 3501.0965230461507 4.130299173299993e-09 8.384018489600846 -1.9313193933688313 ENDPLRT(ph)PEALPEEK ddPTM_A549_MK2206_60min_R1 2 ENDPLRTPEALPEEK 15 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 ENDPLRT(1)PEALPEEK;ENDPLRT(1)PEALPEEK 108.17 1.5172e-06 34386000.0 3967.7 4578.6 4113.7 3296.8 5322.2 4361.5 3650.2 4142.7 5548.3 6073.4 5967.1 True False 4637.350759048444 4811.631183218211 4697.084517243311 4104.516147998975 4539.311430275706 4823.031035070613 4313.394091045891 4729.940411486663 4291.618908814478 4701.414721840507 4485.304386418023 1.033898785797199 1.0727546602608153 1.0472164456589794 0.915103144488451 1.01204088712936 1.0752962607566305 0.9616725464847616 1.0545416774409835 0.9568177628724498 1.048181866113009 1.0 12.130990178808826 -8.77178111206372 24.99874621935464 0.9796083896335788 1.0200552407672803 0.0 0.05051800489419734 312.5424960497991 755497.3425592062 0.008141117353204951 0.00871163990780076 1.691293142306382e-09 8.77178111206372 0.0404468511337015 ENDPLRT(ph)PEALPEEK ddPTM_A549_PD325901_60min_R1 2 ENDPLRTPEALPEEK 15 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 ENDPLRT(1)PEALPEEK;ENDPLRT(1)PEALPEEK 133.26 7.6601e-10 46283000.0 6780.2 7159.2 7602.6 6915.8 7913.7 7525.4 7983.4 7956.8 7420.1 7921.1 8134.5 True False 7468.520912680572 7762.530909214582 8118.558154147701 7342.973259078617 7357.869012782897 7464.115637438422 8287.212655684109 7798.095382011151 7108.259001092826 7420.960394176618 7134.008068844062 1.0468898886304052 1.0881023450359457 1.138007985945994 1.0292914148986116 1.0313794071689504 1.0462723850896691 1.161648904194035 1.093087547246732 0.9963906590092477 1.0402231568234057 1.0 12.800497132212639 -8.766251618646026 24.96739254594427 0.9982955823219135 1.0799580715744428 0.3250863673726955 0.04178035801437766 77.0785420709575 399906.20333479723 0.007050899568098862 0.007623317188916076 1.7129645739420826e-09 8.766251618646026 0.08166248925252928 ENEQGEVDMES(ph)HR ddPTM_A549_MK2206_60min_R1 2 ENEQGEVDMESHR 13 0 A0A096LP69 A0A096LP69 CD99 1 ENEQGEVDMES(1)HR;ENEQGEVDMES(1)HR 60.306999999999995 0.0019952999999999998 7975100.0 149.38 100.24 457.62 149.09 145.03 109.09 152.28 320.56 374.57 315.18 374.61 True False 174.59169200964203 105.34178784034272 522.5173971803689 185.61705669290444 123.69627912007927 120.63383139191868 179.9473048557526 366.00036167382734 289.73049306537837 243.98061909798346 281.583998289966 0.6200341392618951 0.37410431160887625 1.8556359748905105 0.6591889376532044 0.4392873170040752 0.42841152950635314 0.6390537315634276 1.299791053101434 1.0289309578132468 0.8664576843132265 1.0 8.13742154135062 -8.238241265039077 24.622997624916216 1.0355032757886016 0.7232221372031704 0.14189010308712968 0.39235155541962763 1065.789354332384 1131253.8359499339 0.06232541853614494 0.08043249654582431 5.777749849996205e-09 8.238241265039077 -0.31228113858543116 ENEQGEVDMES(ph)HR ddPTM_A549_PD325901_60min_R1 2 ENEQGEVDMESHR 13 0 A0A096LP69 A0A096LP69 CD99 1 ENEQGEVDMES(1)HR;ENEQGEVDMES(1)HR 65.949 0.0012617000000000001 9399000.0 347.49 474.62 432.51 302.79 540.01 497.32000000000005 484.78 534.12 533.38 615.63 711.54 True False 382.7669289913825 514.6178930790345 461.8627294939126 321.4926506140163 502.0815605333654 493.26999080592066 503.22856818179497 523.4665575909662 510.9638934789142 576.7590167359267 624.02509082369 0.6133838760972645 0.8246750020896724 0.7401348700326631 0.5151918654258885 0.8045855333647504 0.7904649958142269 0.8064236127389556 0.838854984019969 0.8188194689486937 0.9242561320324896 1.0 9.285460227963476 -11.030816375884958 0.1479518031162537 1.2759235272792877 0.6089187739939234 0.5554351427754936 0.08438926148853754 7.915204864517716 0.2695911684960811 1.1167102548360932 0.2595079633554764 9.315016405664055e-12 11.030816375884958 -0.6670047532853643 ENES(ph)PDVR ddPTM_A549_PD325901_60min_R1 1 ENESPDVR 8 0 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 ENES(1)PDVR 61.161 0.010962999999999999 2743900.0 503.18 361.85 519.53 426.63 378.93 279.4 354.09 378.26 604.64 432.97 494.87 True False 554.2624631784624 392.34436941268524 554.7884299876821 452.9819661529702 352.31526403753287 277.12465903477465 367.56508871548283 370.71530756077044 579.2290834922393 405.6322003088776 434.00412723939553 1.2770903048871993 0.904010687428945 1.2783021984527403 1.0437273235954887 0.8117786028407898 0.6385300084529228 0.8469161135712769 0.8541746133125708 1.3346165327426438 0.9346275181506095 1.0 8.761564952074655 -12.957401027853633 15.221225287213779 0.41401948750875306 1.0641827376808584 0.0 0.22309496407945434 0.0 0.0 0.0 0.03300402433856033 1.103059583429883e-13 12.957401027853633 0.6501632501721053 ENES(ph)PDVRR ddPTM_A549_MK2206_60min_R1 2 ENESPDVRR 9 1 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 ENES(1)PDVRR;ENES(1)PDVRR 83.137 0.00060949 16143100.0 1119.26 895.9000000000001 1142.07 777.4 1243.5900000000001 942.0400000000001 978.3699999999999 1211.57 1400.03 1300.93 1361.74 True False 1308.163724720256 941.4974833017061 1304.0326991778857 967.8630348988127 1060.6595583737112 1041.7260475244577 1156.1271647735919 1383.3137577775115 1082.925440388503 1007.049009464876 1023.5823758879311 1.2780248620297492 0.9198062661883774 1.2739890114331747 0.9455643802573453 1.036222959049697 1.0177256584950356 1.1294910815269572 1.3514435089579602 1.0579758560702974 0.9838475467998237 1.0 9.999411496943042 -8.989219242845325 20.675322459084196 1.0255764587462997 1.112156629316515 0.11203393977224263 0.1324904498837623 15.590035158719505 29903.172298827485 0.022522295861427174 0.0226473939981112 1.025134281873447e-09 8.989219242845325 0.08658017057021539 ENES(ph)PDVRR ddPTM_A549_PD325901_60min_R1 2 ENESPDVRR 9 1 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 ENES(1)PDVRR;ENES(1)PDVRR 69.45100000000001 0.0016745000000000002 22044500.0 1435.62 1338.29 1180.5500000000002 1344.25 1396.98 1531.98 905.89 1145.18 1468.51 1503.9099999999999 1676.55 True False 1581.3630855524148 1451.0723950291642 1260.6692222238528 1427.2812694867448 1298.8609441193698 1519.5040628063493 940.3641396720287 1122.3384865236692 1406.7936315810866 1408.9528659411137 1470.3449785260952 1.0755048023747504 0.9868924750460601 0.8573968970789251 0.9707118331627735 0.8833715645571663 1.0334337077340394 0.6395534064493283 0.7633164345205061 0.9567779345166235 0.9582464567964708 1.0 10.521938970620427 -4.2832563989173575 16.70043079520026 0.9409885662149812 0.9283264789363397 0.0 0.12299249039674895 0.0 0.0 0.016484727286095013 0.0 5.2088709881522367e-05 4.2832563989173575 -0.012662087278641487 ENET(ph)PR ddPTM_A549_PD325901_60min_R1 1 ENETPR 6 0 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LNQ0;Q6NSI1 Q14966-3 ZNF638;ANKRD26P1 Zinc finger protein 638;Putative ankyrin repeat domain-containing protein 26-like protein 1 ENET(1)PR 72.485 0.051018 3236400.0 665.21 702.03 640.51 506.16 570.91 496.65 408.15 331.04 456.1 763.8 983.81 True False 732.7416294982801 761.1925318744994 683.9788602995212 537.4243536272352 530.8112511325783 492.60544706378244 423.68237159825 324.437147504144 436.93170313047466 715.5735376490765 862.8076068854235 0.8492526301933548 0.8822274233560181 0.7927362425194173 0.6228785529224041 0.6152139212688551 0.570933129393698 0.49105080694370007 0.3760249039473612 0.5064068740744158 0.8293546926784351 1.0 9.752895085753272 -3.285885670963813 19.59993777617551 0.7068726710214379 48.74378761689006 0.0 0.18816847539824413 0.0 0.0 0.0312839235218613 0.0 0.0005177431110945051 3.285885670963813 48.036914945868624 ENFALKT(ph)PLK ddPTM_A549_PD325901_60min_R1 2 ENFALKTPLK 10 1 O75330-2;O75330;O75330-3;O75330-4 O75330-2 HMMR Hyaluronan mediated motility receptor 1 ENFALKT(1)PLK;ENFALKT(1)PLK 47.621 0.012987 10315400.0 7429.6 8017.6 8863.1 7947.200000000001 9608.8 6995.1 9032.0 9208.5 8031.1 8424.3 8534.8 True False 8183.847522617556 8693.271289769646 9464.603264149962 8438.080494599262 8933.91103656044 6938.134224818012 9375.717702500044 9024.829243571501 7693.580795902554 7892.388260299967 7485.07370655484 1.0933556359573031 1.161414253296766 1.2644636025242617 1.1273209624121474 1.1935635354848706 0.9269293124985715 1.2525885609235252 1.2057101369179923 1.0278563842551236 1.0544169061940476 1.0 12.8698008074331 -8.841268847483141 6.6509392243402665 1.0124258967919217 1.1532532948969114 0.2872154157202059 0.08749456470625437 0.16881278222476773 11.464631836797897 0.014653594961218297 0.015570089459635625 1.4412228946343602e-09 8.841268847483141 0.14082739810498968 ENFQNWLK ddPTM_A549_MK2206_60min_R1 2 ENFQNWLK 8 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ; 134.91 0.0029958000000000003 4132900.0 4489.700000000001 4591.8 4619.9 3500.2000000000003 6504.0 5490.9 5149.6 4884.2 7564.3 6534.6 6956.099999999999 False True 5247.451597373747 4825.503006836447 5275.0712889156675 4357.7491571299515 5547.270215796698 6071.943393435568 6085.215662497921 5576.550307235175 5850.998127704948 5058.429321523201 5228.7083914066125 1.0035846722678088 0.9228862360668585 1.0088669885636101 0.8334274606501133 1.0609255289343813 1.1612702294537622 1.1638085750773515 1.0665253997335635 1.1190140450978427 0.9674338178500708 1.0 12.352238897014987 -6.928560549080578 12.643383012599916 1.0753903499474904 0.9456501031894882 0.4576942512513743 0.0706966579524304 0.5871915622482538 102.35180676466254 0.010351509229483531 0.019566893295991185 1.1787981644416584e-07 6.928560549080578 -0.12974024675800222 ENFQNWLK ddPTM_A549_PD325901_60min_R1 2 ENFQNWLK 8 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ; 155.1 0.0011962 6551400.0 6900.6 6322.0 6167.2 6658.3 7548.599999999999 7495.7 6227.799999999999 5301.6 8512.5 7366.5 8585.400000000001 False True 7601.1438320467705 6854.777127060926 6585.743278386298 7069.568068903549 7018.412377256279 7434.657504391415 6464.802336982922 5195.855428975255 8154.749228016149 6901.377932825249 7529.4502273346625 1.009521758235659 0.9103954365984882 0.8746645610960595 0.9389222128381203 0.9321281322475405 0.9874104057957492 0.8586021743677009 0.690071024058622 1.0830470992970274 0.9165845744979786 1.0 12.878328813137804 ENFS(ph)PER ddPTM_A549_MK2206_60min_R1 2 ENFSPER 7 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 ENFS(1)PER;ENFS(1)PER 118.41 0.0068844 368180000.0 7878.3 8408.0 8273.8 8117.400000000001 12927.0 9198.099999999999 8534.1 9293.9 12579.1 10384.7 11463.5 True False 9207.964434057862 8835.931286528343 9447.149252198189 10106.16336440394 11025.455424293357 10171.436836795374 10084.63550282032 10611.338786375045 9729.953934694986 8038.789057512618 8616.796573495163 1.0686064543267857 1.025431111337504 1.0963644286621723 1.1728446039320453 1.2795306620336273 1.180419747645222 1.17034624373519 1.2314714286066581 1.1291845933352818 0.9329208353646797 1.0 13.072935909603455 -10.185391057855083 0.8836774971506512 1.0090414970577166 1.152221076050138 0.4670383338872033 0.07246520639609128 0.4526175501944642 0.6964652870069566 0.03520347080814787 0.01476932340916471 6.525427098676812e-11 10.185391057855083 0.14317957899242129 ENFS(ph)PER ddPTM_A549_PD325901_60min_R1 2 ENFSPER 7 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 ENFS(1)PER;ENFS(1)PER 141.02 0.005319 433580000.0 9262.5 8561.3 8218.0 8641.0 9798.099999999999 8555.0 9073.4 8389.6 11307.900000000001 9313.4 9052.6 True False 10202.822181307896 9282.790796884963 8775.722898848522 9174.734944865135 9109.915257609984 8485.330916401206 9418.693202154996 8222.262846486125 10832.668287281516 8725.350334565208 7939.187589159475 1.285121691196627 1.1692368636760901 1.1053678730089829 1.155626421699965 1.1474618977449373 1.0687908329546791 1.186354787108911 1.0356554438533703 1.3644555145759412 1.0990230721439553 1.0 12.954775669730976 -11.219036458016694 1.681733623683464 1.0000196484149795 1.1921435167258487 0.13293410029639474 0.09422744218429072 0.3755779872542556 1.914618932945548 0.07818568667838441 0.01620225024433978 6.038979314146441e-12 11.219036458016694 0.19212386831086925 ENGAS(ph)ESGDPLDEDDVDTVVDEQPK ddPTM_A549_PD325901_60min_R1 2 ENGASESGDPLDEDDVDTVVDEQPK 25 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 ENGAS(0.784)ES(0.212)GDPLDEDDVDT(0.004)VVDEQPK;ENGAS(0.478)ES(0.478)GDPLDEDDVDT(0.044)VVDEQPK 47.104 0.0034353 1686850.0 584.95 637.76 466.65 473.53999999999996 630.38 718.92 535.7 856.29 380.18 521.2 785.64 True False 644.33369338257 691.5062734189149 498.3196751944105 502.78949031263056 586.1042834929407 713.0653538771664 556.0863566462876 839.2106242034904 364.2023567115629 488.2913430514517 689.0112605822916 0.9351569854432219 1.0036211495796379 0.7232387969585209 0.7297260858809727 0.8506454350217978 1.0349110307348917 0.8070787641066017 1.2179926108816619 0.5285869441433674 0.7086841260602779 1.0 9.428383751011225 -8.782461446134674 24.999818898460756 0.7773883687878582 0.9018779647086356 0.15165171279509926 0.17014003021406304 517.5093809841175 615428.7036614881 0.03630384296403882 0.03866745510165916 1.6502074896042816e-09 8.782461446134674 0.12448959592077735 ENGEEGCHQNGLALPVVEEGEVLSHS(ph)LEAEHR ddPTM_A549_PD325901_60min_R1 3 ENGEEGCHQNGLALPVVEEGEVLSHSLEAEHR 32 0 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 ENGEEGCHQNGLALPVVEEGEVLS(0.146)HS(0.854)LEAEHR;ENGEEGCHQNGLALPVVEEGEVLS(0.042)HS(0.958)LEAEHR;ENGEEGCHQNGLALPVVEEGEVLS(0.062)HS(0.938)LEAEHR 84.666 7.561399999999999e-07 17536400.0 1286.14 1199.52 1179.72 1128.5700000000002 1293.9299999999998 1422.28 1099.35 1034.51 1426.45 1554.81 1793.8400000000001 True False 1416.7079859937737 1300.607760115806 1259.7828934326578 1198.2792057315648 1203.0488206161688 1410.6974232354312 1141.1863658374034 1013.875886492605 1366.5012671134969 1456.6390312544656 1573.209052088664 0.9005211253475103 0.8267227793973471 0.8007727210570729 0.7616783059700011 0.7647100803411641 0.896700550611837 0.7253876173178081 0.6444635473884015 0.8686075542848342 0.9259030319718573 1.0 10.619494677203434 -9.63299446178497 1.1542843568171641 0.9734890605363327 0.7935835451460702 0.42346621276008367 0.07388463466272001 0.2467757241068954 0.6762583625963905 0.020965063532995765 0.01477279421973764 2.3281209461661137e-10 9.63299446178497 -0.17990551539026245 ENGFS(ph)SPPQIKDEPEDDGYFVPPKEDIKPLK ddPTM_A549_MK2206_60min_R1 1 ENGFSSPPQIKDEPEDDGYFVPPKEDIKPLK 31 3 P11387 P11387 TOP1 DNA topoisomerase 1 1 ENGFS(0.542)S(0.458)PPQIKDEPEDDGY(0.001)FVPPKEDIKPLK 79.017 1.8638e-06 6852400.0 1182.9 1221.5 1384.8 1291.7 2135.0 1035.8 1075.7 1158.3 1521.3 1602.8 1951.7 True False 1382.54460087164 1283.6691325516626 1581.1854630815417 1608.166557986616 1820.9443282173975 1145.4076684916058 1271.140765913666 1322.492572144978 1176.7279790169 1240.7263668070548 1467.0390258202574 0.9424047871518793 0.8750068061985821 1.0778073624847588 1.09619889429148 1.2412378240580635 0.7807615532594168 0.866466906156733 0.9014706145295216 0.8021108902395849 0.8457350792787086 1.0 10.518691534411273 -7.284986244184337 24.992473722733237 0.8927506459603508 1.0414989409033517 0.41911890550160513 0.10312490871951416 804.0625527270843 853424.2916300069 0.01772439835273785 0.02834347499339231 5.188164716284795e-08 7.284986244184337 0.1487482949430009 ENGFSS(ph)PPQIKDEPEDDGYFVPPKEDIKPLK ddPTM_A549_PD325901_60min_R1 1 ENGFSSPPQIKDEPEDDGYFVPPKEDIKPLK 31 3 P11387 P11387 TOP1 DNA topoisomerase 1 1 ENGFS(0.145)S(0.855)PPQIKDEPEDDGYFVPPKEDIKPLK 133.13 1.3243e-28 21720000.0 3998.9 3616.4 3602.2 3646.6 4448.9 4088.0 3904.6 5145.1 4578.3 4711.0 4326.1 True False 4404.865384165415 3921.166719756905 3846.6669537882904 3871.8421999705147 4136.424611871795 4054.70868337208 4053.1916896791045 5042.47694424713 4385.88997246712 4413.546656015708 3794.0171254073775 1.161003031501195 1.0335131840860827 1.0138770666132035 1.0205125786180473 1.090249325489708 1.068711223314974 1.0683113849265766 1.3290601432658795 1.1560016276932832 1.163291179277903 1.0 11.889510475452735 -7.3506443523143545 2.0140655102278595 1.0973332371904927 1.055183958773971 0.06523762019625401 0.08916799485626735 1.116909395998606 8.852760892871052 0.01602521043177999 0.028380477722455638 4.4602134980868396e-08 7.3506443523143545 -0.04214927841652161 ENGLEECAGEPLS(ph)ADPEAR ddPTM_A549_MK2206_60min_R1 2 ENGLEECAGEPLSADPEAR 19 0 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 ENGLEECAGEPLS(1)ADPEAR;ENGLEECAGEPLS(1)ADPEAR 72.819 0.00063177 2536300.0 1136.1399999999999 1235.55 796.51 574.92 1391.73 1185.58 1106.85 1068.08 1203.74 1168.8 765.36 True False 1327.892656043879 1298.4342175392596 909.4670950311087 715.7754258091393 1187.0083606135825 1311.0372886756893 1307.950317701535 1219.4836108578158 931.0948119777842 904.7672682331458 575.2999891385928 2.308174310992352 2.2569689588964343 1.5808571392342115 1.2441777147969062 2.0632859082631168 2.278875914179539 2.2735100684774094 2.1197351536261473 1.6184509465608188 1.572687789526766 1.0 9.168170632759438 -9.609024749544705 0.8791675195508694 1.095845508727361 1.9957575876493645 0.35009614630797714 0.3563637009747126 0.2989673477016706 0.4877712266188972 0.11896381308624833 0.076224877388708 2.4602273968792926e-10 9.609024749544705 0.8999120789220034 ENGLEECAGEPLS(ph)ADPEAR ddPTM_A549_PD325901_60min_R1 2 ENGLEECAGEPLSADPEAR 19 0 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 ENGLEECAGEPLS(1)ADPEAR;ENGLEECAGEPLS(1)ADPEAR 88.552 6.150900000000001e-06 3627600.0 898.24 837.53 751.03 910.5 841.56 882.24 718.29 1088.12 831.44 832.49 948.06 True False 989.4286635506616 908.1115924117902 801.9994121102714 966.7395171044677 782.4517288243899 875.0553299457398 745.6249190133698 1066.4165929863734 796.4974682104844 779.9264393263674 831.4546302475019 1.189997177905107 1.0921962057526453 0.9645738720241867 1.1627086817914467 0.9410636496082473 1.0524390605477285 0.8967716239567 1.2825914417830948 0.9579566211248212 0.9380264550264205 1.0 9.69949373229782 -2.0000000000000004 0.4761862844481062 0.9989480217161696 5.807071768805326 0.15720800434653026 0.10857930860352577 98.87495402855635 0.9953957473438769 0.019201772377961532 473.3355554638464 0.00999999999999999 2.0000000000000004 4.808123747089156 ENGNVAKT(ph)PR ddPTM_A549_MK2206_60min_R1 1 ENGNVAKTPR 10 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ENGNVAKT(1)PR 54.276 0.007724600000000001 69996000.0 4595.9 4775.2 4255.8 4921.7 6198.7 5262.7 4361.7 4985.0 6984.6 7368.3 6823.3 True False 5371.57556103303 5018.237283471715 4859.336433984996 6127.51672094351 5286.879441368238 5819.595420902466 5154.1644312407125 5691.639015922225 5402.59925211427 5703.795912493406 5128.88629650016 1.0473181214211116 0.9784263080458716 0.9474447576076898 1.1947070702512539 1.030804571545267 1.1346703912842893 1.0049285816216673 1.1097222061261283 1.0533669377308843 1.1120924861183903 1.0 12.324429872882435 -4.0447188767176625 9.648824625651585 1.0397848952985536 0.9782656195731297 0.0 0.07294767621676752 0.0 0.0 0.008762136263466709 0.0 9.021549227954554e-05 4.0447188767176625 -0.061519275725423817 ENHATFMS(ph)ELK ddPTM_A549_MK2206_60min_R1 1 ENHATFMSELK 11 0 A0A1W2PPI5;Q5JSJ4 A0A1W2PPI5 DDX26B Protein DDX26B 1 ENHAT(0.143)FMS(0.857)ELK 54.471000000000004 0.0066964 11544000.0 3255.9 5044.8 4380.5 2901.8 4569.9 4042.0 3460.4 3583.5 5725.3 5690.3 6912.6 True False 3805.4163208876257 5301.558771917007 5001.720769084845 3612.7411302667538 3897.673763709923 4469.7217571375495 4089.109887856882 4091.472099008488 4428.528691425396 4404.857277915013 5196.010641945535 0.7323726957308095 1.020313301346887 0.9626078762633284 0.6952913262152288 0.7501281333501123 0.8602218250007198 0.786971037904919 0.7874256580576448 0.8522939994917385 0.8477383095323507 1.0 12.343188670233548 -10.26310961443217 0.7812287813817208 0.995862923316036 0.8295818677769896 0.05234769199645384 0.10153371479346972 0.5977703520273713 0.6947286046138413 0.05401131044882481 0.019018434698973134 5.4562013106793155e-11 10.26310961443217 -0.16628105553904637 ENIKPNET(ph)SPSFSK ddPTM_A549_MK2206_60min_R1 2 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.49)S(0.49)PS(0.02)FSK;ENIKPNET(0.499)S(0.499)PS(0.001)FSK 176.11 2.759e-23 144131000.0 30054.0 31390.0 29892.0 26888.0 35808.0 31979.0 28294.0 33641.0 41809.0 38540.0 36132.0 True False 35126.38045024621 32987.61692246965 34131.135082635345 33475.561207048195 30540.690634570754 35362.99655405781 33434.653556531804 38409.71477124165 32339.328255253753 29833.787232807525 27159.427207530607 1.293340252790993 1.2145917758281382 1.2566956888240877 1.2325577027547285 1.1244968607475865 1.3020523696557402 1.2310514982901126 1.4142314003069854 1.1907220284191742 1.0984689406312438 1.0 14.729165433006578 -10.006920838164278 0.8615438063867046 1.0171618268795495 1.2508717133863443 0.5140799007270214 0.07409868449596324 0.2528727730563966 0.37968552023020236 0.029945875127416102 0.014305159557839488 9.841904845663239e-11 10.006920838164278 0.2337098865067948 ENIKPNET(ph)SPSFSK ddPTM_A549_PD325901_60min_R1 1 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.499)S(0.499)PS(0.002)FSK 95.666 1.9469e-05 26809000.0 10704.0 11690.0 11988.0 11483.0 14846.0 12549.0 11808.0 13088.0 12114.0 14275.0 14092.0 True False 11790.662200131677 12675.157326058572 12801.577769700192 12192.27883021483 13803.268175919593 12446.805104607682 12257.359901585529 12826.949572662628 11604.890707569764 13373.674063813256 12358.773336548102 0.9540317537229709 1.025599950811853 1.035829157238656 0.9865282336847375 1.1168801142342941 1.0071230182528914 0.9917942151538076 1.0378820958492707 0.9390002058902633 1.0821198592795476 1.0 13.593247935971238 -8.750382413783546 24.988823938972235 0.9711945404547336 1.0210253451536169 0.0 0.05275066020722094 237.05727332154092 535750.6819458943 0.007156658146703516 0.008076646507369823 1.7767142525872204e-09 8.750382413783546 0.049830804698883235 ENIKPNETS(ph)PSFSK ddPTM_A549_PD325901_60min_R1 3 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.145)S(0.843)PS(0.012)FSK;ENIKPNET(0.109)S(0.887)PS(0.005)FSK;ENIKPNET(0.093)S(0.898)PS(0.009)FSK 130.56 2.6713999999999997e-09 164923000.0 33368.1 35204.8 35875.5 34047.0 42697.6 32935.1 33825.6 36606.9 37253.3 38572.8 37409.1 True False 36755.60494770309 38171.632047256346 38310.22716690683 36150.00586365273 39698.66787472344 32666.887465197597 35112.851718078564 35876.74666194251 35687.673352840444 36137.30682512477 32808.017855823266 1.1203238522128256 1.1634848595548744 1.1677092878717434 1.1018649777172163 1.2100294522266335 0.9956982957261888 1.0702521521532944 1.093535940501037 1.087772919097764 1.10147790652676 1.0 15.001760813516825 -14.999999866577204 0.04425995383537554 0.4609557326220247 1.4063933740036447 0.20742607861236995 0.0557147360820274 273.91202855897785 0.9292103576235321 18.66242893271497 5.153388831093399 1.0000003072173892e-15 14.999999866577204 0.94543764138162 ENITDAIWGSES(ph)NYEAIK ddPTM_A549_PD325901_60min_R1 1 ENITDAIWGSESNYEAIK 18 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 ENIT(0.009)DAIWGS(0.008)ES(0.966)NY(0.016)EAIK 40.012 0.032757 11660000.0 2979.2 2921.2 2642.2 3907.3 3703.1 3335.0 2634.5 2919.0 3615.5 3763.9 4136.7 True False 3281.6461908288757 3167.379775952293 2821.515580839326 4148.645046877857 3443.0070310014717 3307.8408657157242 2734.757339153717 2860.7782550888 3463.553108239929 3526.2467116488074 3627.9121247018543 0.9045550382779916 0.8730585711782067 0.7777243449829153 1.1435351530789344 0.9490326426482619 0.9117753550845905 0.7538102481957063 0.7885467334256069 0.9546959764149655 0.9719768810383185 1.0 11.824923795988214 -8.974504068997511 16.086115581548682 0.9800182088888436 0.889320746125594 0.13578878499842972 0.10028478617096374 5.140086940662289 3243.1792679692344 0.018274270913301346 0.018991162337231283 1.0604640026126548e-09 8.974504068997511 -0.09069746276324964 ENLELNGS(ph)ILSAR ddPTM_A549_MK2206_60min_R1 2 ENLELNGSILSAR 13 0 O43663-3 O43663-3 PRC1 Protein regulator of cytokinesis 1 1 ENLELNGS(1)ILSAR;ENLELNGS(1)ILSAR 125.67 2.3256000000000002e-06 5507500.0 2606.4 2559.1 2648.4 2012.0 3224.2 3127.1 2433.7 2994.8 3075.5 3600.2 3865.9 True False 3046.2965996380453 2689.347259200129 3023.9829436923424 2504.9400903221112 2749.9244510719127 3458.007646399018 2875.871787676943 3419.3220711903473 2378.9041605643033 2786.9123195525067 2905.8903365878614 1.0483178120255738 0.9254813319479906 1.0406390446389477 0.8620215493966122 0.9463276767357002 1.1899993619371958 0.9896697585132663 1.1766865487447695 0.8186489801805966 0.9590562604729742 1.0 11.504764543776638 -8.787372857793335 24.999943476962706 0.9143620479046178 1.0163857216881513 0.14725342217947035 0.10164655189080563 310.4705816418044 299293.02903978137 0.01913081029836139 0.020369712314946817 1.6316505143832812e-09 8.787372857793335 0.1020236737835335 ENLELNGS(ph)ILSAR ddPTM_A549_PD325901_60min_R1 2 ENLELNGSILSAR 13 0 O43663-3 O43663-3 PRC1 Protein regulator of cytokinesis 1 1 ENLELNGS(1)ILSAR;ENLELNGS(1)ILSAR 170.11 1.1942e-21 20781700.0 3548.7 3537.5 4229.0 3999.5 5185.5 4544.3 4086.4 4254.8 4498.4 4633.6 4619.3 True False 3908.9614115851355 3835.6175398573314 4516.005371042883 4246.540031476466 4821.288369003847 4507.292727457861 4241.910188163882 4169.934676173972 4309.3478916073855 4341.03370522488 4051.1553841553114 0.9649003903611503 0.9467959572370437 1.1147450400707095 1.048229363920558 1.1901020602321608 1.11259438358908 1.047086518763176 1.0293198558819108 1.063733054639648 1.0715544810261604 1.0 11.98411770606045 -5.740591482888865 24.989240813592705 1.0533459816515336 0.9558480791231585 0.38730839833871666 0.05228782927622487 233.4029254049119 279763.0355548815 0.00814330695387292 0.03147095414299729 1.817224222697255e-06 5.740591482888865 -0.09749790252837509 ENLLLSDS(ph)PSCR ddPTM_A549_MK2206_60min_R1 2 ENLLLSDSPSCR 12 0 E9PF63;O75116;D6REE7 E9PF63 ROCK2 Rho-associated protein kinase 2 1 ENLLLS(0.092)DS(0.746)PS(0.162)CR;ENLLLS(0.039)DS(0.958)PS(0.003)CR 85.837 0.00036239 4060300.0 1966.54 2481.6 1945.57 1976.2200000000003 2582.2 2122.32 2196.37 2439.3999999999996 3308.5 3108.4 3144.2 True False 2298.443874713089 2607.9028402293943 2221.481081316836 2460.393988715886 2202.361800619655 2346.902493718001 2595.421998726223 2785.192420349183 2559.130032588848 2406.2102811224436 2363.4083644945704 0.9725123720650898 1.103449949406907 0.9399480490507249 1.041036337891635 0.931858342259292 0.9930160733013657 1.0981690839878493 1.1784643154315035 1.0828133093859698 1.018110250124729 1.0 11.206653213394135 -7.736076776866313 24.674356130620424 1.0567955500897792 0.9982616151715674 0.25804391184775255 0.06274692445163055 298.52627049787117 290424.7798558365 0.010430963467074946 0.015468141317377705 1.836213699122387e-08 7.736076776866313 -0.058533934918211794 ENLLLSDS(ph)PSCR ddPTM_A549_PD325901_60min_R1 2 ENLLLSDSPSCR 12 0 E9PF63;O75116;D6REE7 E9PF63 ROCK2 Rho-associated protein kinase 2 1 ENLLLS(0.055)DS(0.744)PS(0.201)CR;ENLLLS(0.166)DS(0.417)PS(0.417)CR 87.083 0.00028137 3098500.0 2020.7 2313.8 2389.0 3080.4 2531.3 2612.8 2355.1 2601.5 2197.4 2409.7 2710.4 True False 2225.8399764392834 2508.792046281805 2551.1319062240373 3270.6693119040124 2353.510220510932 2591.5222230710806 2444.7246192601697 2549.6110416627307 2105.0509196643393 2257.551130758025 2377.0379826412145 0.9363922632679477 1.0554278327072393 1.0732398576943984 1.37594322673374 0.9901020672357368 1.0902317262055463 1.028475201958593 1.0726000426925295 0.8855773172481407 0.9497328806877443 1.0 11.214949240921111 -8.69473118442596 8.095247865052793 0.9460428684183121 1.0830834590602905 0.2320498850117345 0.10723338442605976 0.27126394337383464 29.1964736539444 0.01856112211451765 0.021024793654948092 2.01961606011312e-09 8.69473118442596 0.13704059064197838 ENLPENVTASES(ph)DAEVER ddPTM_A549_MK2206_60min_R1 2 ENLPENVTASESDAEVER 18 0 K7EMK2;A0A0G2JPB6;A0A0G2JLQ8;A0A0G2JP37;A0A0G2JNC8;A0A0G2JMG8;A0A0G2JLX3;J3KN39;A0A0G2JPQ2;Q9NX02-3;Q9NX02-4;Q9NX02-5;Q9NX02-2;Q9NX02 K7EMK2 NLRP2 NACHT, LRR and PYD domains-containing protein 2 1 ENLPENVT(0.001)AS(0.02)ES(0.979)DAEVER;ENLPENVTAS(0.001)ES(0.999)DAEVER 222.79 6.232999999999999e-64 33622000.0 1580.53 1596.42 966.49 1296.32 2233.84 1502.13 1544.72 1626.0 1713.0 2308.8 1889.3600000000001 True False 1847.2848237515038 1677.6709591388667 1103.5528150012126 1613.9184581940167 1905.2450951499554 1661.0843995668058 1825.3756288204495 1856.4904794161557 1325.008235098896 1787.240476468761 1420.1797683167292 1.3007401351316261 1.1813088712898152 0.7770514970151987 1.1364184268776878 1.3415520609817944 1.169629674090914 1.2853130776422617 1.3072221706246137 0.9329862772720418 1.258460735986326 1.0 10.471857844282091 -8.777696237999983 24.99869190572097 0.9683546103415804 1.1796327177803485 0.01697176390750299 0.1702373343364405 225.00827398430144 346001.14727075153 0.02652969604198866 0.02828431639184188 1.6684137562767873e-09 8.777696237999983 0.21127810743876807 ENLPENVTASES(ph)DAEVER ddPTM_A549_PD325901_60min_R1 2 ENLPENVTASESDAEVER 18 0 K7EMK2;A0A0G2JPB6;A0A0G2JLQ8;A0A0G2JP37;A0A0G2JNC8;A0A0G2JMG8;A0A0G2JLX3;J3KN39;A0A0G2JPQ2;Q9NX02-3;Q9NX02-4;Q9NX02-5;Q9NX02-2;Q9NX02 K7EMK2 NLRP2 NACHT, LRR and PYD domains-containing protein 2 1 ENLPENVTASES(1)DAEVER;ENLPENVTAS(0.003)ES(0.997)DAEVER 222.79 6.232999999999999e-64 45200000.0 1557.4699999999998 1344.0 1275.67 1386.92 1612.25 1453.73 1595.0 1619.3899999999999 1815.31 1580.6100000000001 1370.52 True False 1715.5832078511855 1457.2635967684098 1362.24463742688 1472.5868984761446 1499.011121960553 1441.8913048626457 1655.698597817489 1587.0899960631211 1739.0188336105732 1480.8100148514104 1201.954728442089 1.4273276415949834 1.2124113847925362 1.1333576924253632 1.2251600360895747 1.2471444110906682 1.1996219747240813 1.377504958080675 1.3204241045918796 1.4468255687671354 1.2320014887505448 1.0 10.231166842706125 -11.011844853633665 1.3136707199460518 1.0009889232149738 1.2971631888945627 0.15664133189798146 0.11481473261600751 0.2892221727775993 0.8936133956354415 0.07527668950656029 0.017316511651616292 9.730947878457412e-12 11.011844853633665 0.29617426567958893 ENLS(ph)PGFSHLLSK ddPTM_A549_MK2206_60min_R1 1 ENLSPGFSHLLSK 13 0 H0YG46;J3KNE4;A0A0A0MTP3;Q99550-2;Q99550;F5H1U6 H0YG46 MPHOSPH9 M-phase phosphoprotein 9 1 ENLS(0.963)PGFS(0.037)HLLSK 73.464 0.0003756 2181000.0 581.84 791.89 1006.1 771.9 855.03 508.77 596.28 789.89 961.59 1087.3 793.71 True False 680.0403673777625 832.1938185643353 1148.7801086123186 961.0155346519072 729.2562196513919 562.6077037058063 704.6163576266621 901.8593264366713 743.7914003436932 841.6781748373537 596.609901718397 1.1398409000907683 1.3948709469410299 1.9255129780842102 1.6107938066128702 1.2223334167785982 0.943007653887984 1.1810336295076185 1.5116398903857844 1.2466963726236757 1.410768028510915 1.0 9.220644111533476 -9.665643344579994 0.17216974451162367 0.7881017126106187 1.5766441162547769 0.0 0.2728017517024037 6.13027606880946 0.5297585572370795 1.4677237522164492 0.7289230731308043 2.159517140224315e-10 9.665643344579994 0.7885424036441582 ENLS(ph)PGFSHLLSK ddPTM_A549_PD325901_60min_R1 2 ENLSPGFSHLLSK 13 0 H0YG46;J3KNE4;A0A0A0MTP3;Q99550-2;Q99550;F5H1U6 H0YG46 MPHOSPH9 M-phase phosphoprotein 9 1 ENLS(0.884)PGFS(0.115)HLLSK;ENLS(0.793)PGFS(0.207)HLLSK 50.966 0.012298 521680.0 188.86 249.09 247.49 130.56 0.0 159.69 237.95 216.81 233.02 424.7 271.44 True False 208.03292816861628 270.081688481431 264.28615967827 138.62439467672638 0.0 158.38953758505073 247.00531746123622 212.4855544658454 223.22697974887794 397.8843695202448 238.05460079993034 0.8738874504822305 1.1345367305394671 1.1101913543791813 0.5823218463785597 0.0 0.665349617494547 1.0375994273214169 0.8925916733045035 0.937713360711251 1.6713996208569022 1.0 7.895148701412527 -7.759764300342717 24.99834516275451 0.9673183106407586 0.7239050287551214 0.17458211286729497 0.3562483661158476 75.03782563413628 1119826.7808984243 0.048160406410383085 0.06938162583555707 1.7387442214136683e-08 7.759764300342717 -0.24341328188563716 ENMDT(ph)DDERQYQDFLEDLEEDEAIRK ddPTM_A549_PD325901_60min_R1 3 ENMDTDDERQYQDFLEDLEEDEAIRK 26 2 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 ENMDT(1)DDERQYQDFLEDLEEDEAIRK;ENMDT(1)DDERQYQDFLEDLEEDEAIRK;ENMDT(0.999)DDERQY(0.001)QDFLEDLEEDEAIRK 127.83 5.7515000000000005e-24 13230900.0 4156.9400000000005 4064.9 4362.9 4718.4 4581.700000000001 4133.299999999999 4995.0 5284.5 4010.1 4446.799999999999 4840.099999999999 True False 4578.949488622511 4407.46338876779 4658.992630248993 5009.844851736106 4259.897198006929 4099.639775191246 5185.08745836888 5179.096501889947 3841.5694424983903 4166.0282891043635 4244.798383921832 1.078720135676256 1.0383210202543636 1.0975768950289886 1.1802315207035665 1.003557015603447 0.9658031794206273 1.221515603192984 1.2201042389921244 0.9050063383573727 0.9814431481325876 1.0 12.051480316079083 -8.780954815498532 24.999450409855196 0.9551418764851852 1.097483158427968 0.364975665128075 0.0811837781292295 189.9801369352297 243365.2433377553 0.01506889852468699 0.016053614139095028 1.65594224065822e-09 8.780954815498532 0.14234128194278284 ENNNTKDSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 ENNNTKDSPSR 11 1 D6RCP5;Q8N264-3;Q8N264-2;Q8N264 D6RCP5 ARHGAP24 Rho GTPase-activating protein 24 1 ENNNT(0.028)KDS(0.409)PS(0.562)R 42.317 0.022147999999999998 6099200.0 1083.8 919.07 982.93 776.4 1157.9 655.14 699.97 719.67 1076.0 1079.3 959.4 True False 1193.8265781486089 996.5232543764454 1049.6375406382551 824.3564646676655 1076.5730985381447 649.8047570509746 726.6077413882808 705.315617279807 1030.7794618907928 1011.15281380551 841.3998821376841 1.418857553337825 1.1843634347138847 1.2474895265869501 0.9797439744979312 1.2795023167854183 0.772290050005786 0.8635700536851049 0.8382644593292102 1.2250767842657235 1.2017506007209637 1.0 9.7166478057904 -5.3013994535838584 0.9375413600561793 1.0528267893935563 1.5712767720227 0.3453048798339996 0.1626147959493995 1.9899101529562169 1.3604758588574826 0.026340802605436656 1.0305043239080167 4.995748267254592e-06 5.3013994535838584 0.5184499826291438 ENNS(ph)PEHLKDEVSIIQSMGYR ddPTM_A549_PD325901_60min_R1 2 ENNSPEHLKDEVSIIQSMGYR 21 1 P38398;P38398-4;P38398-8;P38398-7;P38398-5;Q5YLB2;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;H0Y881;A0A0U1RRA9;E9PH68;E7EWN5;E7EQW4;A0A494C182;H0Y8D8;Q3B891 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 ENNS(1)PEHLKDEVSIIQSMGYR;ENNS(1)PEHLKDEVSIIQSMGYR 108.5 2.2157e-10 4441400.0 1214.02 1417.83 1340.63 1386.89 1365.17 1185.02 1240.42 1466.21 1170.31 1577.09 1365.28 True False 1337.2664166857112 1537.3155099748187 1431.613213663093 1472.5550454442782 1269.285168780827 1175.3695900121286 1287.6248618838686 1436.9652913305065 1121.1259405626524 1477.5122682521373 1197.3592152229912 1.1168464732086805 1.2839217257692508 1.1956422061665724 1.2298356472497984 1.0600704889922616 0.9816348970874481 1.0753872735209764 1.2001121075957912 0.9363321602313459 1.2339757772499138 1.0 10.225640319379366 -7.205578506682312 0.5525445311761268 0.975760635098448 1.2357941943856932 0.0 0.11308766472403438 0.5697487373650985 0.3180571029790183 0.01954959499634193 0.06534580827133392 6.229045358468495e-08 7.205578506682312 0.26003355928724514 ENNTHPEWS(ph)FTTVR ddPTM_A549_MK2206_60min_R1 1 ENNTHPEWSFTTVR 14 0 Q8NBY1;B4E0Y9;Q9P289-2;Q9P289-3;Q9P289 Q8NBY1 STK26 Serine/threonine-protein kinase 26 1 ENNTHPEWS(0.477)FT(0.262)T(0.262)VR 74.786 0.00027685 11687000.0 729.02 655.02 469.3 418.77 1088.4 697.64 751.26 626.58 893.9 1027.0 1322.3 True False 852.0607531722399 688.3577201833729 535.853796811213 521.3686687992997 928.2978017947621 771.4638017440476 887.7542175330491 715.3996338207721 691.433077264975 794.9999867175228 993.9364163765563 0.8572588136758978 0.6925570980614781 0.5391228130715787 0.5245493174502798 0.9339609521290276 0.7761701745031705 0.8931700286919765 0.7197639829203526 0.6956512165895159 0.7998499437375823 1.0 9.957009753119356 -14.999999989565628 0.2583864772786463 2.8223234026274646 0.7048636538326702 0.08751181421071441 0.1384174357810514 34.714086857699264 0.4502849773993795 32.460140346638234 0.06228892928329147 1.0000000240260288e-15 14.999999989565628 -2.1174597487947944 ENNTHPEWSFT(ph)TVR ddPTM_A549_MK2206_60min_R1 3 ENNTHPEWSFTTVR 14 0 Q8NBY1;B4E0Y9;Q9P289-2;Q9P289-3;Q9P289 Q8NBY1 STK26 Serine/threonine-protein kinase 26 1 ENNTHPEWS(0.013)FT(0.596)T(0.39)VR;ENNTHPEWS(0.167)FT(0.666)T(0.167)VR;ENNTHPEWS(0.031)FT(0.788)T(0.181)VR 90.385 6.1503e-05 31243500.0 1831.9199999999998 2210.27 1858.87 2226.87 2964.6499999999996 2568.7799999999997 2055.45 2134.0699999999997 3964.0000000000005 3358.06 3671.5299999999997 True False 2141.1033098560947 2322.7633021735255 2122.485717618706 2772.4532499679945 2528.5539122481077 2840.6065945818386 2428.8986588242474 2436.5809578152744 3066.16032920725 2599.4719137260404 2759.78777192696 0.7758217250021067 0.8416456242762856 0.7690757018380178 1.004589294209457 0.9162131733349197 1.0292844339253118 0.8801034208251177 0.882887076535594 1.111013086004933 0.9419100773502658 1.0 11.430341612476811 -6.011436004961481 0.38668481454065995 1.0459931428994096 0.6695929121876519 0.3723761152909494 0.08102314886582997 1.9538108239285 0.28812933819622444 0.023474949105763993 0.3084943783484679 9.740112992368411e-07 6.011436004961481 -0.37640023071175766 ENNTHPEWSFT(ph)TVR ddPTM_A549_PD325901_60min_R1 3 ENNTHPEWSFTTVR 14 0 Q8NBY1;B4E0Y9;Q9P289-2;Q9P289-3;Q9P289 Q8NBY1 STK26 Serine/threonine-protein kinase 26 1 ENNTHPEWS(0.028)FT(0.594)T(0.378)VR;ENNTHPEWS(0.033)FT(0.806)T(0.161)VR;ENNTHPEWS(0.003)FT(0.839)T(0.157)VR 141.13 5.8379e-13 54713000.0 2516.17 2585.5699999999997 1980.62 2715.62 2277.17 3120.27 2207.98 2388.1800000000003 3422.06 2851.9700000000003 3500.7699999999995 True False 2771.6097260935476 2803.4650579587055 2115.0367836355995 2883.3576797794994 2117.229435010024 3094.85955564222 2292.0058871530173 2340.545876409035 3278.242718734209 2671.8961274797543 3070.197483209445 0.9027464002726732 0.9131220624375245 0.6888927488223447 0.9391440438435146 0.6896069215706504 1.0080327316296913 0.746533700091845 0.762343754500878 1.067762818731544 0.8702684899235457 1.0 11.584115741196861 -8.767222126399773 24.999866312058575 1.0319991197020488 0.8312199732990351 0.2258122821995655 0.11095501047738685 83.74326719979078 362036.434471438 0.0159389775766206 0.017191703299853568 1.709140925843878e-09 8.767222126399773 -0.20077914640301375 ENNTHPEWSFTT(ph)VR ddPTM_A549_PD325901_60min_R1 1 ENNTHPEWSFTTVR 14 0 Q8NBY1;B4E0Y9;Q9P289-2;Q9P289-3;Q9P289 Q8NBY1 STK26 Serine/threonine-protein kinase 26 1 ENNTHPEWS(0.021)FT(0.112)T(0.868)VR 106.94 1.6269e-05 13668000.0 847.55 772.47 995.11 912.29 809.02 685.87 801.36 1043.3 1523.2 1029.1 1274.6 True False 933.5926520666674 837.5687578837009 1062.6441486825447 968.6400813390835 752.1972261674844 680.2845021194735 831.856193321018 1022.4905630469827 1459.1852010706843 964.1224503726958 1117.83228035511 0.835181331290671 0.7492794514912597 0.9506293272770462 0.8665343615156368 0.6729070535774189 0.6085747513959451 0.7441690564319329 0.9147083878470218 1.3053704269545108 0.8624929404135796 1.0 10.126488027001056 -8.55900261906249 5.426462442178597 1.1438503650406107 0.777238546060836 0.40854649208989513 0.13786545493835095 0.09554500541994203 7.230818100981431 0.023963087886447056 0.027431062161125702 2.7605612082903964e-09 8.55900261906249 -0.3666118189797747 ENNVSQPASSSSSSSSSNNGSAS(ph)PTKTK ddPTM_A549_MK2206_60min_R1 1 ENNVSQPASSSSSSSSSNNGSASPTKTK 28 1 A0A3B3IRW4;Q02446 A0A3B3IRW4 SP4 Transcription factor Sp4 1 ENNVSQPASS(0.001)S(0.001)S(0.001)S(0.001)S(0.004)S(0.004)S(0.004)S(0.004)NNGS(0.054)AS(0.867)PT(0.054)KT(0.004)K 82.554 8.1614e-07 6901100.0 706.32 820.8 789.57 682.17 830.24 674.71 717.49 509.06 1291.3 1294.5 1029.5 True False 825.5295481339558 862.5752140797417 901.5428986751108 849.3016806237748 708.1127958122775 746.10736436375 847.8486456590097 581.2208139308663 998.8226117823726 1002.0715509307047 773.8467372454547 1.0667868822093487 1.1146589790507102 1.1650147959325858 1.0975063145538426 0.915055606918806 0.9641539189265765 1.095628636591489 0.7510800084261519 1.290724071975454 1.2949224991212438 1.0 9.595904054193 ENNVSQPASSSSSSSSSNNGSAS(ph)PTKTK ddPTM_A549_PD325901_60min_R1 2 ENNVSQPASSSSSSSSSNNGSASPTKTK 28 1 A0A3B3IRW4;Q02446 A0A3B3IRW4 SP4 Transcription factor Sp4 1 ENNVSQPASSSSSSSSS(0.001)NNGS(0.026)AS(0.946)PT(0.026)KT(0.001)K;ENNVSQPASSSSSS(0.001)S(0.001)S(0.001)S(0.003)NNGS(0.141)AS(0.703)PT(0.123)KT(0.028)K 127.77 1.6262e-27 16103800.0 1364.1599999999999 1379.46 2305.8 1720.0700000000002 2017.7199999999998 2296.1 2228.87 2120.62 2580.1 2329.3999999999996 2034.39 True False 1502.6485189584848 1495.7119354152915 2462.2854539017926 1826.314817337598 1876.0023079561154 2277.4013228695285 2313.6908675344625 2078.3225705057916 2471.667369539439 2182.3212864621096 1784.1729270607516 0.8422101334280134 0.8383222908103022 1.3800710775037732 1.0236198462815322 1.0514688792227351 1.276446519464524 1.2967862209107945 1.164866106297007 1.3853294891158707 1.2231557005280134 1.0 10.80103973676021 -5.74024841792969 24.94604501552356 1.188814898643631 0.840265771968596 0.5420691711589462 0.12724309598306763 168.66771290583458 198552.76990652643 0.021545733083982187 0.08327591596912731 1.818660281127633e-06 5.74024841792969 -0.3485491266750351 ENPPVEDS(ph)S(ph)DEDDKR ddPTM_A549_MK2206_60min_R1 4 ENPPVEDSSDEDDKR 15 1 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 2 ENPPVEDS(1)S(1)DEDDKR;ENPPVEDS(1)S(1)DEDDKR;ENPPVEDS(1)S(1)DEDDKR;ENPPVEDS(1)S(1)DEDDKR 65.5 0.0046903 8548900.0 1782.02 1674.7600000000002 1314.61 1655.37 1974.6 1706.56 1622.9 1866.81 1616.96 2147.61 2070.45 True False 2082.781409793964 1759.9981305216722 1501.0414656424207 2060.935724312383 1684.138955736804 1887.147046477154 1917.7599228421377 2131.436034365851 1250.7211417545304 1662.463409420078 1556.3001234869857 1.338290332540336 1.1308860700841485 0.9644935722804194 1.3242533963787977 1.0821427887336972 1.2125855533885619 1.2322558444223979 1.3695533414147896 0.8036503518050317 1.0682151754220948 1.0 10.60390458721894 -8.769866222279832 24.999994157130416 0.907279327008303 1.1970000022258842 0.4090745966074575 0.12943092287667532 105.47644600811442 312917.03136378026 0.022064896806996345 0.02367389052338008 1.6987668508166135e-09 8.769866222279832 0.28972067521758116 ENPPVEDS(ph)S(ph)DEDDKR ddPTM_A549_PD325901_60min_R1 4 ENPPVEDSSDEDDKR 15 1 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 2 ENPPVEDS(1)S(1)DEDDKR;ENPPVEDS(1)S(1)DEDDKR;ENPPVEDS(1)S(1)DEDDKR;ENPPVEDS(1)S(1)DEDDKR 78.069 0.0008621000000000001 37446300.0 7540.8 7178.400000000001 7120.9 6743.39 8428.7 7264.5 7168.4 6846.360000000001 7144.2 7802.600000000001 8329.0 True False 8306.336464756441 7783.348960596993 7604.167095450287 7159.9138849501405 7836.697189436447 7205.3403205373 7441.197384698994 6709.803978934485 6843.954118624723 7309.942504399952 7304.585801881153 1.1371399679660559 1.0655428208663855 1.0410127694703761 0.9801943709260346 1.0728462094891484 0.9864132636626303 1.0187021669021479 0.9185741889987118 0.9369393835940975 1.0007333341908886 1.0 12.834586753650655 -3.6911988284465522 0.403335135356415 0.9687561033826505 1.6709151485497895 0.6216964534792493 0.036788812383185064 7.892506668764255 0.32547401407597143 0.0089101579003561 3.541773216754227 0.00020361096937371344 3.6911988284465522 0.702159045167139 ENPPVEDS(ph)S(ph)DEDDKRNQGNLYDK ddPTM_A549_PD325901_60min_R1 4 ENPPVEDSSDEDDKRNQGNLYDK 23 2 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 2 ENPPVEDS(1)S(1)DEDDKRNQGNLYDK;ENPPVEDS(1)S(1)DEDDKRNQGNLYDK;ENPPVEDS(1)S(1)DEDDKRNQGNLYDK;ENPPVEDS(0.999)S(0.998)DEDDKRNQGNLY(0.003)DK 115.54 3.0529e-15 243523000.0 25701.3 26693.399999999998 26230.1 27874.5 28131.399999999998 30680.9 28212.7 31359.100000000002 28063.200000000004 31447.4 34030.0 True False 28310.477055702937 28942.94649849543 28010.23232040481 29596.24455741737 26155.547512061454 30431.04492261999 29286.349737081808 30733.61814976197 26883.801296406804 29461.805797153156 29844.52573394352 0.9485986578605322 0.9697908003804301 0.9385383627841509 0.9916808469754381 0.8763934714604487 1.0196524881616529 0.9812972066690652 1.0297908039733814 0.9007950582317563 0.9871762097946466 1.0 14.865178707328646 -5.214753602891235 19.357853282875087 0.9605171243373816 0.9485978357877826 0.0 0.045906039514715155 12132.0273301742 5028244.659519042 0.006631235263066441 2.512248963234367 6.0988281630689685e-06 5.214753602891235 -0.011919288549599005 ENPPVEDS(ph)SDEDDKR ddPTM_A549_MK2206_60min_R1 3 ENPPVEDSSDEDDKR 15 1 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 ENPPVEDS(0.913)S(0.087)DEDDKR;ENPPVEDS(0.846)S(0.154)DEDDKR;ENPPVEDS(0.847)S(0.153)DEDDKR 208.47 1.1069e-45 600549000.0 15485.059999999998 16152.03 14855.749999999998 14538.27 19784.23 16007.15 15797.13 17590.780000000002 20521.2 20270.91 20382.100000000002 True False 18098.559554631327 16974.099336101874 16962.518734238587 18100.146802647752 16873.995975011003 17701.015988313775 18667.264039637215 20084.326934504385 15873.180965622567 15691.69735224158 15320.662052657199 1.1813170666141242 1.1079220517861306 1.1071661704917397 1.181420668404371 1.1013881721961485 1.155368869013316 1.2184371651484596 1.3109307460392015 1.036063644708457 1.024217967755514 1.0 13.903191021423794 -8.966905400912248 24.451055629514276 1.0159103312292295 1.1659547723823518 0.5813651704795296 0.05694861125364395 71.98416244265248 53183.970415714815 0.010317154433632382 0.010913770223653566 1.079181766645541e-09 8.966905400912248 0.15004444115312232 ENPPVEDS(ph)SDEDDKR ddPTM_A549_PD325901_60min_R1 3 ENPPVEDSSDEDDKR 15 1 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 ENPPVEDS(0.907)S(0.093)DEDDKR;ENPPVEDS(0.987)S(0.013)DEDDKR;ENPPVEDS(0.827)S(0.173)DEDDKR 236.96 8.592399999999998e-65 745016000.0 21255.2 20699.6 21237.47 21875.4 25917.1 20668.1 20575.5 22709.6 22909.0 22296.8 22799.3 True False 23413.01225674877 22444.027937252522 22678.77242548169 23226.593775361973 24096.772305141167 20499.785846086706 21358.511911845613 22256.639212663442 21946.214398193475 20888.976242804318 19995.130636670532 1.1709356984049875 1.122474683715783 1.1342147664636624 1.1616125044347059 1.2051320265419188 1.0252389053408157 1.068185664797542 1.1131029657713445 1.097577945199553 1.0447031641040894 1.0 14.287361086466987 -14.999999999947295 0.09576130927383988 0.5858565814880037 1.218033630273415 0.5136221019322841 0.042693704117198646 59.69938436169395 0.4137908208600998 4.965460006684975 0.33745894577160057 1.0000000001213567e-15 14.999999999947295 0.6321770487854113 ENPPVEDS(ph)SDEDDKRNQGNLYDK ddPTM_A549_MK2206_60min_R1 4 ENPPVEDSSDEDDKRNQGNLYDK 23 2 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 ENPPVEDS(0.966)S(0.034)DEDDKRNQGNLYDK;ENPPVEDS(0.972)S(0.028)DEDDKRNQGNLYDK;ENPPVEDS(0.849)S(0.151)DEDDKRNQGNLYDK;ENPPVEDS(0.984)S(0.016)DEDDKRNQGNLYDK 207.9 1.0779999999999998e-73 1001511000.0 13635.1 15108.9 14123.3 12279.8 19661.1 12561.9 12056.699999999999 12485.099999999999 19942.7 20177.1 21530.1 True False 15936.371533810876 15877.87847467034 16126.196310470492 15288.351551261168 16768.978234901686 13891.191920085648 14247.246325547365 14254.901159015173 15425.710291947886 15619.079096395455 16183.581969469034 0.9847246155934742 0.9811102699405228 0.9964540817288284 0.9446828013787829 1.0361722310015808 0.8583508858726041 0.880351849944305 0.8808248498946405 0.9531703377564433 0.9651187929755887 1.0 13.982243339459236 ENPPVEDS(ph)SDEDDKRNQGNLYDK ddPTM_A549_PD325901_60min_R1 4 ENPPVEDSSDEDDKRNQGNLYDK 23 2 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 ENPPVEDS(0.972)S(0.028)DEDDKRNQGNLYDK;ENPPVEDS(0.621)S(0.379)DEDDKRNQGNLYDK;ENPPVEDS(0.979)S(0.021)DEDDKRNQGNLYDK;ENPPVEDS(0.899)S(0.101)DEDDKRNQGNLYDK 258.25 3.0150999999999992e-111 1418589000.0 29396.6 30357.4 30075.0 33128.7 34694.7 35863.3 34739.4 37585.7 35719.1 36896.8 38646.6 True False 32380.921191366855 32915.72463730458 32116.07035566675 35174.98455826338 32257.863962217278 35571.24117523922 36061.426877129095 36836.02372808875 34217.950443516216 34567.12975115273 33893.31320098211 0.9553778646352156 0.9711568899186519 0.9475636142510888 1.0378148736796888 0.9517471417129723 1.0495061655467925 1.0639687735244532 1.0868227461168172 1.0095782091473045 1.019880515846149 1.0 15.048713052222348 -6.255181618052175 24.947803169289642 1.0159648517913455 0.9593451968792637 0.408947744842469 0.03523510115101124 466.5167916373212 1859853.5437246282 0.005230900902022668 0.013485618754708474 5.55671831704809e-07 6.255181618052175 -0.056619654912081874 ENPPVEDSS(ph)DEDDKR ddPTM_A549_MK2206_60min_R1 1 ENPPVEDSSDEDDKR 15 1 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 ENPPVEDS(0.226)S(0.774)DEDDKR 161.84 7.537999999999999e-20 12580000.0 595.6 531.97 598.97 577.79 770.47 554.89 579.45 707.31 894.83 821.52 961.53 True False 696.1227189780609 559.0450007724174 683.9129526443896 719.3485759379785 657.1348836354377 613.6080914938285 684.7285644777112 807.5733585460277 692.1524337498798 635.9380614295809 722.7555641220222 0.9631509649098117 0.773491106154991 0.946257609894962 0.995286112825458 0.9092076439891568 0.8489842513204555 0.9473860852382301 1.117353360713368 0.9576577035289684 0.879879855649532 1.0 9.497364000084243 -8.000970088992815 24.99985041478863 0.991777099631226 0.9054060716053595 0.20622541898722002 0.07580076420738481 37.857186001146324 975637.922880332 0.010538363423509882 0.014465680758921844 9.977687804254578e-09 8.000970088992815 -0.08637102802586649 ENPPVEDSS(ph)DEDDKR ddPTM_A549_PD325901_60min_R1 1 ENPPVEDSSDEDDKR 15 1 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 ENPPVEDS(0.384)S(0.616)DEDDKR 129.93 2.2637e-09 27982000.0 663.61 592.37 590.49 709.28 905.0 755.05 529.13 849.39 811.0 734.86 783.58 True False 730.9791986761381 642.291098822696 630.5642023048267 753.0906147082454 841.4359220805088 748.9011231360294 549.2663317010459 832.4482501164358 776.9164903284698 688.4608141880078 687.2046275228761 1.0636994708709304 0.9346431515426823 0.9175785159913465 1.095875354365503 1.2244328521383518 1.08977892921872 0.7992762413154175 1.211354255743461 1.1305460691220495 1.001827965957767 1.0 9.424595941154807 -6.2703741554369685 24.386207478904502 1.0703004366595534 0.9682406564115771 0.12470148129066871 0.11449834740009326 692.1423862913645 1889107.7194625607 0.01614915906123814 0.03805640517175296 5.365693294379644e-07 6.2703741554369685 -0.10205978024797635 ENPQEYPDFYDFS(ph)NAACRPSTPALSR ddPTM_A549_PD325901_60min_R1 1 ENPQEYPDFYDFSNAACRPSTPALSR 26 1 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 ENPQEYPDFY(0.005)DFS(0.328)NAACRPS(0.328)T(0.328)PALS(0.009)R 49.199 0.0027515 3469400.0 1586.9 1891.9 1806.0 1834.2 2100.3 1976.0 2137.0 2108.7 2115.1 2401.4 2007.3 True False 1748.000919785965 2051.337052623627 1928.5660203602372 1947.494368229562 1952.7821736416508 1959.9081111407122 2218.32470441127 2066.6403242568526 2026.2097024583813 2249.775194174512 1760.4148253230928 0.9929483066385506 1.1652577694278057 1.0955179385099096 1.1062701473626446 1.1092738742888355 1.1133217483447437 1.2601147596016955 1.1739507612233142 1.1509842301438848 1.2779801452544606 1.0 10.78169971120614 -10.678713951716722 0.9905222321811432 1.0016151286007566 1.1330326920727045 0.0 0.10234320546144411 0.44078115605379076 0.7834069549421009 0.03947799271135143 0.01095362821762803 2.0954921984283194e-11 10.678713951716722 0.13141756347194788 ENPVLDVVS(ph)NPEQTAGEER ddPTM_A549_MK2206_60min_R1 1 ENPVLDVVSNPEQTAGEER 19 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ENPVLDVVS(0.899)NPEQT(0.101)AGEER 87.486 6.7123e-06 1006800.0 322.58 886.38 950.17 935.49 645.35 790.87 578.3 986.13 1323.7 847.78 891.29 True False 377.02361767619726 931.4929559649136 1084.918393599212 1164.6850919957421 550.419869889976 874.5593384629825 683.3696243635519 1125.9169473964666 1023.8840635145406 656.2659091912185 669.9580946474026 0.5627570152348468 1.3903749553994957 1.6193824692426504 1.7384446897513988 0.8215735794335923 1.3053940917353362 1.020018460592237 1.680578168085325 1.5282807562067122 0.9795626240423436 1.0 9.387927048725587 -11.049183682174617 1.392859539691331 1.00237501953056 1.3368040706485762 0.09123726023667855 0.3524991894223906 0.7810665535986129 2.7332814755672947 0.23895901732572042 0.05496299217189676 8.929277455709288e-12 11.049183682174617 0.33442905111801613 ENPVLDVVS(ph)NPEQTAGEER ddPTM_A549_PD325901_60min_R1 1 ENPVLDVVSNPEQTAGEER 19 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ENPVLDVVS(0.995)NPEQT(0.005)AGEER 109.89 7.2922e-10 1041500.0 1281.7 1098.9 1110.6 696.78 1410.5 1081.1 1255.4 1132.8 812.73 1410.4 1183.5 True False 1411.8172404623294 1191.508159589886 1185.9719945803324 739.8185180978046 1311.4313459608372 1072.2958800375627 1303.17493398124 1110.2054153355914 778.5737844447069 1321.3471032996308 1037.9370028246294 1.3602147689312807 1.1479580710075177 1.1426242549912398 0.7127778623215776 1.2634980180800217 1.0331030468317726 1.255543381182861 1.0696269738089033 0.7501166085474412 1.2730513506154348 1.0 10.019503167210889 -8.608675782711554 7.088420359159857 0.88243402967477 1.1203124654502052 0.0 0.2034539311622674 0.21437940385057866 15.01561816961728 0.029327025824256277 0.03326003837572217 2.4622050475756474e-09 8.608675782711554 0.23787843577543522 ENPVLDVVSNPEQT(ph)AGEER ddPTM_A549_PD325901_60min_R1 1 ENPVLDVVSNPEQTAGEER 19 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ENPVLDVVS(0.005)NPEQT(0.995)AGEER 83.25299999999999 0.00015468 1383500.0 444.31 500.79 432.57 333.62 637.79 649.35 363.78 510.25 520.52 494.11 723.87 True False 489.41602411626565 542.9933308226581 461.9268014547221 354.22694969400635 592.9938306560529 644.0619088913064 377.62384696805407 500.07266346661845 498.644354557059 462.9118102746597 634.83857899 0.7709298714878117 0.8553250366203901 0.7276287496415659 0.557979557980811 0.9340860027748782 1.014528622245958 0.5948344342412789 0.787716247903856 0.7854663706014529 0.7291803390574212 1.0 9.31024599284758 -10.576810972759313 0.6792581497116783 1.0154237608318775 0.7790631375366686 0.0 0.14796726676397076 0.8789675186065056 0.6575624961193034 0.11747433334602399 0.02567311682317943 2.6496531526597282e-11 10.576810972759313 -0.2363606232952089 ENQECPRS(ph)LEEDLETLK ddPTM_A549_PD325901_60min_R1 1 ENQECPRSLEEDLETLK 17 1 P48681 P48681 NES Nestin 1 ENQECPRS(1)LEEDLETLK 79.635 8.481399999999999e-05 2119400.0 1449.7 1765.5 1775.7 1250.1 1065.7 1500.1 1490.4 1581.1 1200.2 1530.0 1829.8 True False 1596.8724767872666 1914.2848810227895 1896.2096801515368 1327.3158378169087 990.8489084654121 1487.8836829565705 1547.117987578173 1549.5637201510444 1149.7597678079283 1433.3955388885672 1604.7462000578853 0.9950934775415984 1.192889493026211 1.181625904509472 0.827118853915361 0.6174489825429534 0.927176947297274 0.964088893011472 0.9656129549302872 0.7164745227416366 0.8932225786463073 1.0 10.64812942944195 -6.263583448462194 24.985904010366163 0.862057302709853 1.1301716195587652 0.4901111334793635 0.11772452939896579 134.76988996243696 1570552.4468875336 0.01940696208316336 0.047251551928802295 5.450251605765509e-07 6.263583448462194 0.2681143168489122 ENQEPLRS(ph)PEVGDEEALRPLTK ddPTM_A549_MK2206_60min_R1 3 ENQEPLRSPEVGDEEALRPLTK 22 2 P48681 P48681 NES Nestin 1 ENQEPLRS(1)PEVGDEEALRPLTK;ENQEPLRS(1)PEVGDEEALRPLTK;ENQEPLRS(1)PEVGDEEALRPLTK 131.94 1.7169e-22 39999700.0 5375.42 5978.63 6078.91 5101.47 8348.75 5926.71 5009.75 5313.92 8222.369999999999 6912.42 7506.8099999999995 True False 6282.65947959881 6282.91673020659 6940.990845884611 6351.330379013694 7120.6599345222485 6553.870518368301 5919.956727745646 6067.184433197481 6360.016323426798 5350.899521115812 5642.661899583833 1.1134212170433568 1.113466807336087 1.230091571922205 1.125591164603027 1.2619327652871464 1.161485595805709 1.049142555959673 1.075234444517216 1.1271304991525142 0.9482934856526599 1.0 12.462160192563179 -7.735308183181023 7.648248282882435 1.0621827778093444 1.1706839366281812 0.500333989418714 0.06172527460758433 0.14195819798971526 31.39844007416598 0.009392980858807166 0.01379868965042779 1.839466219883366e-08 7.735308183181023 0.10850115881883671 ENQEPLRS(ph)PEVGDEEALRPLTK ddPTM_A549_PD325901_60min_R1 2 ENQEPLRSPEVGDEEALRPLTK 22 2 P48681 P48681 NES Nestin 1 ENQEPLRS(1)PEVGDEEALRPLTK;ENQEPLRS(1)PEVGDEEALRPLTK 153.25 1.1942999999999999e-28 52490000.0 6262.7 6956.9 6896.8 7035.4 8726.3 6882.700000000001 6366.0 7775.4 8913.9 9406.900000000001 11257.4 True False 6898.484693643937 7543.1823782426745 7364.858321827512 7469.960679447312 8113.394792100709 6826.649573151916 6608.261613608868 7620.313547316703 8539.279781922256 8812.946728608405 9872.81116653823 0.6987356060272749 0.7640359215831727 0.7459737857429215 0.7566194221120259 0.8217917526468365 0.6914595506788762 0.6693394112515947 0.7718484045500756 0.8649289080767906 0.8926481606857826 1.0 13.269245218236252 -9.29052546876757 0.8703757887882161 0.9736318523825948 0.7373545410932151 0.711075691691174 0.050709698643877005 0.15299286304816206 0.2470341485545367 0.014208823099607878 0.011014250538690812 5.122412295067024e-10 9.29052546876757 -0.23627731128937968 ENQPENSQT(ph)PTK ddPTM_A549_MK2206_60min_R1 2 ENQPENSQTPTK 12 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.001)QT(0.997)PT(0.003)K;ENQPENS(0.003)QT(0.926)PT(0.071)K 121.76 1.2855999999999999e-05 24671000.0 1812.27 1945.04 2088.3999999999996 1892.69 2795.7 2082.27 1642.16 2318.8 2925.5 2825.3 2482.8 True False 2118.13687025247 2044.0342280624516 2384.5665230354484 2356.3991349660814 2384.4562334413945 2302.6144293010393 1940.5192155366608 2647.4970010271754 2262.8789210635236 2187.0627677439325 1866.2522382059394 1.1349681607287296 1.0952615012145501 1.277730027173483 1.2626370041122248 1.277670930341985 1.2338173705364621 1.039794715746525 1.4186169194214926 1.2125257640622407 1.1719009483125356 1.0 10.865928275254548 -10.469411675133069 0.8658888977862683 1.0035203847477554 1.2176773012615019 0.11106797282587644 0.1087082136452506 0.45239088807894245 0.6260685585016451 0.05825580018705722 0.018174548347131888 3.393034885489295e-11 10.469411675133069 0.21415691651374646 ENQPENSQT(ph)PTK ddPTM_A549_PD325901_60min_R1 2 ENQPENSQTPTK 12 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENSQT(0.999)PT(0.001)K;ENQPENSQT(0.997)PT(0.003)K 199.38 1.5121e-24 29432000.0 4515.8 5108.0 5403.200000000001 4453.0 5771.1 5381.1 5410.7 5633.4 5197.9 5380.1 5235.9 True False 4974.240691643746 5538.469086527558 5769.893644081087 4728.051696503239 5365.757845214171 5337.2781056980175 5616.60714934865 5521.037417683194 4979.450339184155 5040.399567826389 4591.917493104757 1.083260032244283 1.2061342772042718 1.2565325166981296 1.029646482891494 1.1685222683707657 1.1623201230667792 1.223150711610688 1.2023381138649827 1.0843945577552991 1.0976677118861726 1.0 12.164881004777174 -9.24517965296348 1.3533606849109736 1.0236754944947501 1.1671942691157837 0.30259172339489104 0.06656399366601526 0.22633077396877063 0.8593067754208783 0.014323566246172117 0.012537278918270093 5.686176642575925e-10 9.24517965296348 0.14351877462103357 ENQPENSQT(ph)PTKK ddPTM_A549_MK2206_60min_R1 4 ENQPENSQTPTKK 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.055)QT(0.814)PT(0.131)KK;ENQPENSQT(0.987)PT(0.013)KK;ENQPENS(0.001)QT(0.98)PT(0.019)KK;ENQPENS(0.003)QT(0.997)PTKK 149.73 5.6087e-13 1113496100.0 12750.32 16265.18 16205.91 14087.8 20208.699999999997 14979.599999999999 14262.9 14821.35 20882.5 21119.899999999998 20508.7 True False 14902.262300605023 17093.008187799136 18504.151724442367 17539.31163242538 17236.027000303005 16564.731329346276 16854.284308032013 16922.321750980715 16152.647092500112 16348.899921592416 15415.823778674956 0.966686082726221 1.1087962883595144 1.2003349279355127 1.1377472838453102 1.1180736915367426 1.074527807736141 1.0933106494994391 1.0977241303438958 1.0477965579007473 1.0605271671701517 1.0 13.912124364658148 -9.082952124745704 0.6892064383000499 1.0073801114217245 1.1100787913357617 0.1782181247005672 0.05548759888620754 0.4768029388946065 0.4942416414086599 0.017138599227550653 0.014049619159598924 8.261290144153889e-10 9.082952124745704 0.10269867991403725 ENQPENSQT(ph)PTKK ddPTM_A549_PD325901_60min_R1 7 ENQPENSQTPTKK 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.002)QT(0.981)PT(0.017)KK;ENQPENS(0.008)QT(0.988)PT(0.004)KK;ENQPENS(0.012)QT(0.979)PT(0.009)KK;ENQPENS(0.029)QT(0.971)PTKK;ENQPENS(0.108)QT(0.811)PT(0.081)KK;ENQPENS(0.107)QT(0.868)PT(0.026)KK;ENQPENS(0.088)QT(0.884)PT(0.028)KK 197.14 6.938599999999999e-30 1711829100.0 46849.310000000005 44976.119999999995 51052.39000000001 47181.83 55445.7 47597.32 53695.13 54449.079999999994 48506.81 46480.84 50748.04 True False 51605.41746256086 48766.41547610685 54517.11218836034 50096.1444813895 51551.38530928095 47209.70320676116 55738.52755525257 53363.05038492303 46468.237462675585 43546.03182993022 44506.35279833071 1.1595067719073222 1.0957180809013838 1.2249287744468944 1.1255953663151756 1.15829273953031 1.0607407760568475 1.2523723929439383 1.1989985031288501 1.044081002845474 0.9784228338648208 1.0 15.441723659370137 -8.873643475392232 5.046412328376627 1.0190935121341191 1.1579813769749603 0.6141983693165728 0.053660597319801835 0.10419707217059958 4.148350641864209 0.009117477987929603 0.009647601703591068 1.33769321606559e-09 8.873643475392232 0.13888786484084115 ENQPENSQT(ph)PTKKEHQK ddPTM_A549_MK2206_60min_R1 1 ENQPENSQTPTKKEHQK 17 2 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.155)QT(0.689)PT(0.155)KKEHQK 64.295 0.0016814 5677100.0 605.46 1058.2 600.04 591.69 912.93 473.82 542.63 477.96 1275.5 1145.2 1335.4 True False 707.6468459242055 1112.057860062357 685.134694733859 736.6540765619739 778.6392063510582 523.9593179037389 641.2188470835106 545.7122936911111 986.6012865549571 886.4985246240581 1003.78332483495 0.7049796787972767 1.1078664414406467 0.682552377373388 0.7338775792904314 0.7757044643863636 0.5219844810531121 0.6388020514177647 0.5436554684556465 0.9828827219431863 0.8831572538523921 1.0 9.971232169566363 -8.827169638733869 11.154226621980332 0.992104301555956 0.719688574849528 0.33510021182502603 0.14900909450570732 0.38455313383353273 63.69932580059385 0.025869180588197503 0.02752741368082538 1.4887794355296557e-09 8.827169638733869 -0.272415726706428 ENQPENSQT(ph)PTKKEHQK ddPTM_A549_PD325901_60min_R1 3 ENQPENSQTPTKKEHQK 17 2 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.004)QT(0.841)PT(0.155)KKEHQK;ENQPENS(0.131)QT(0.738)PT(0.131)KKEHQK;ENQPENS(0.049)QT(0.906)PT(0.045)KKEHQK 99.059 4.5303999999999993e-07 40314600.0 1603.04 1552.72 2093.34 2185.6400000000003 1630.4700000000003 3567.7999999999997 2719.9700000000003 2982.31 2062.22 2442.21 2760.4900000000002 True False 1765.7794407043252 1683.573163671314 2235.4066406760253 2320.6420188514126 1515.9514120161402 3538.74501970032 2823.4799467746934 2922.8254874730656 1975.552064963226 2288.008443809833 2420.9672301878863 0.7293694101622709 0.6954134457824344 0.923352704985825 0.9585598639727612 0.6261759321287841 1.4617071125847851 1.1662611172789683 1.2072965924640917 0.8160176810034341 0.9450803031448985 1.0 11.24136783604958 -5.831400731267855 3.9909462887170224 0.9707686515314512 0.7094654573560297 0.21686536264843315 0.20905253079857666 0.28014287577672387 8.635638453872861 0.030200894031075825 0.10835638003186945 1.4743455005467959e-06 5.831400731267855 -0.26130319417542147 ENQRS(ph)PVR ddPTM_A549_MK2206_60min_R1 3 ENQRSPVR 8 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ENQRS(1)PVR;ENQRS(1)PVR;ENQRS(1)PVR 52.247 0.007674500000000001 594408000.0 6342.900000000001 6812.1 5266.700000000001 3963.2 4101.5 3725.8 3178.89 3605.7 3437.1 7894.200000000001 8568.7 True False 7413.426450983791 7158.806793168381 6013.597254774377 4934.184177914806 3498.174783224198 4120.061683014122 3756.453164781348 4116.819016993137 2658.6023379208473 6110.89473723999 6440.85530591076 1.1510003095676602 1.1114683459196417 0.9336643922517108 0.7660759237032876 0.5431227091864539 0.6396761745653794 0.5832227221956156 0.6391727218612007 0.41277162917804616 0.9487706906925908 1.0 12.653036566738328 -6.057761121424202 1.9454103207444864 0.6825690625471942 1.144153092543884 0.5438312729924022 0.1597512912448048 0.2685808742340566 1.930226503959686 0.030968734007728805 0.12583316256029928 8.754651821538733e-07 6.057761121424202 0.4615840299966899 ENQRS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 ENQRSPVR 8 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ENQRS(1)PVR;ENQRS(1)PVR 60.641000000000005 0.0031252 755780000.0 3567.2999999999997 3639.5 3979.2 3867.7 4281.5 3364.5 3089.42 3038.9 3672.7 4343.0 4504.1 True False 3929.449669892537 3946.2134378263627 4249.252440873456 4106.599044815979 3980.7822103731473 3337.1006274964175 3206.989568695493 2978.2867555290677 3518.3491911582864 4068.782238818985 3950.124253842346 0.9947660927552598 0.9990099511395928 1.075726272848289 1.039612625051333 1.0077612638389741 0.8448090270199397 0.8118705545973661 0.7539729294925451 0.8906932959731417 1.0300390512681261 1.0 11.947682319618348 -7.10470514724199 6.541208362165409 0.9132410071777386 1.028122663247959 0.4102516112138175 0.07768859690674769 0.25362460518810664 13.690742218840532 0.013105430070704261 0.022854211007967213 7.85768930599783e-08 7.10470514724199 0.11488165607022038 ENQRS(ph)PVRVK ddPTM_A549_MK2206_60min_R1 2 ENQRSPVRVK 10 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ENQRS(1)PVRVK;ENQRS(1)PVRVK 67.997 0.00088528 12561400.0 1763.2200000000003 2306.25 2268.94 2208.12 2892.7 1566.8899999999999 1461.27 1564.37 3122.0 2975.5 3509.6 True False 2060.808429409835 2423.628274209801 2590.7098097950843 2749.1094991262735 2467.1876619365175 1732.697259782596 1726.763844014747 1786.1242381821985 2414.8719848095448 2303.3324834255004 2638.0694599676044 0.781180503653282 0.9187128356504924 0.9820476106140504 1.0420914008685853 0.9352246782640874 0.6568050182438614 0.6545558675456377 0.6770573198645543 0.9153936321446212 0.8731129025896783 1.0 11.365266835692614 -9.125916009647314 3.2104086798371463 0.9677011341192662 0.8365189739833064 0.08398403597316273 0.13005752463164733 0.33062903180651343 7.100309326746658 0.027325769224253168 0.026527072461110905 7.483142066946341e-10 9.125916009647314 -0.13118216013595974 ENQRS(ph)PVRVK ddPTM_A549_PD325901_60min_R1 3 ENQRSPVRVK 10 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ENQRS(1)PVRVK;ENQRS(1)PVRVK;ENQRS(1)PVRVK 71.548 0.00052827 21953600.0 5577.4 4942.4 5587.6 6011.5 5748.9 7160.2 6425.9 6814.0 7106.400000000001 5988.700000000001 6905.200000000001 True False 6143.613542135131 5358.913393354308 5966.808136968367 6382.816701892927 5345.117096628327 7101.88970515674 6670.441140887401 6678.089424520411 6807.742721171687 5610.572459962064 6055.904175669319 1.0144832817563727 0.8849072306798882 0.9852877396807381 1.0539824470038741 0.8826290743012899 1.1727216116942298 1.1014773264886017 1.1027402730959373 1.1241496766945247 0.9264632162615032 1.0 12.564126661983682 -7.2566045021588605 24.99124977182923 1.0743693624464865 0.9660026004483306 0.3236872401184707 0.07692285809702891 355.8791080695212 1839520.86487977 0.010482072576260366 0.01778178666159945 5.5385425665991105e-08 7.2566045021588605 -0.10836676199815587 ENQSEGKGS(ph)DSDSEGDNPEKK ddPTM_A549_MK2206_60min_R1 1 ENQSEGKGSDSDSEGDNPEKK 21 2 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 ENQSEGKGS(0.5)DS(0.5)DS(0.001)EGDNPEKK 159.7 2.9061e-28 32938000.0 3176.2 3682.3 2734.2 2666.8 3688.2 2690.6 2272.2 2332.6 4009.5 4617.7 4979.8 True False 3712.2649093655455 3869.713341625039 3121.950673857271 3320.1661197172016 3145.670665728996 2975.3175061242678 2685.029328166806 2663.2531932879024 3101.354651855821 3574.558362868068 3743.178224511816 0.9917414257905653 1.0338041924599317 0.8340374106190026 0.8869911931992542 0.8403742694189383 0.7948639705800563 0.7173127131869299 0.7114951609431429 0.8285351286633696 0.9549527563129219 1.0 11.870048025792837 -5.757697502444154 24.967513645302414 0.8703315612746901 1.0127728538214988 0.3269996016775335 0.08709327459012403 111.29505921985341 742577.3960075892 0.015173945634687552 0.05457529815472364 1.7470385876649544e-06 5.757697502444154 0.1424412925468087 ENQSEGKGS(ph)DSDSEGDNPEKK ddPTM_A549_PD325901_60min_R1 1 ENQSEGKGSDSDSEGDNPEKK 21 2 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 ENQSEGKGS(0.604)DS(0.389)DS(0.007)EGDNPEKK 187.26 3.2195999999999993e-45 76208000.0 4896.4 4752.0 5349.0 5004.6 6202.0 4520.5 5667.3 5020.2 5935.8 5426.9 6833.1 True False 5393.478923460833 5152.467717145452 5712.015306150004 5313.722775728745 5766.392915738468 4483.686546766998 5882.972202765557 4920.068172729288 5686.338968300529 5084.244607839451 5992.672018589754 0.9000123662249202 0.8597947128029166 0.9531666823131435 0.8867034203182064 0.9622406996162397 0.7481948841615624 0.9816943401067338 0.8210140914548365 0.9488820597324608 0.8484102904460169 1.0 12.548983701436704 -9.092993506453496 2.623220039472566 0.9810355916269564 0.8908751860469333 0.0 0.075372694870011 0.22155347336487144 3.155515324998803 0.011222696294135866 0.010944760751274422 8.07247100071539e-10 9.092993506453496 -0.09016040558002314 ENQSEGKGSDS(ph)DSEGDNPEK ddPTM_A549_MK2206_60min_R1 2 ENQSEGKGSDSDSEGDNPEK 20 1 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 ENQSEGKGS(0.046)DS(0.95)DS(0.004)EGDNPEK;ENQSEGKGS(0.018)DS(0.975)DS(0.007)EGDNPEK 187.26 2.1939e-44 66929000.0 4931.0 4964.5 5031.299999999999 4303.3 6265.7 3674.4 4001.4 4261.5 5550.6 6889.6 7157.200000000001 True False 5763.232248624614 5217.171844906043 5744.813995091099 5357.608693182477 5344.023830122598 4063.2225691306826 4728.402585039457 4865.580675296403 4293.397962486821 5333.234574964992 5379.869711328968 1.0712587028805471 0.9697580285113011 1.0678351527721255 0.9958621640781348 0.9933370354432774 0.7552641210946651 0.8789065235320389 0.9044049273257357 0.7980486875817369 0.9913315491143267 1.0 12.393355518950374 -7.023613528284426 23.98909161366018 0.8902503069397852 1.0213084423450987 0.4558425249988688 0.0721605393826141 386.84541210758744 392998.1657742162 0.012506325156463684 0.02175751173244108 9.470795774571562e-08 7.023613528284426 0.13105813540531341 ENQSEGKGSDS(ph)DSEGDNPEK ddPTM_A549_PD325901_60min_R1 2 ENQSEGKGSDSDSEGDNPEK 20 1 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 ENQSEGKGS(0.107)DS(0.893)DSEGDNPEK;ENQSEGKGS(0.031)DS(0.967)DS(0.002)EGDNPEK 283.17 2.2490999999999995e-127 129474000.0 10390.0 9535.8 11565.8 10263.4 11705.5 11310.099999999999 11559.6 11103.8 11919.3 10703.1 12337.900000000001 True False 11444.785151286256 10339.41533189301 12350.72473880534 10897.3469081274 10883.346061782753 11217.994295451701 11999.506903655829 10882.32599823741 11418.373271482282 10027.304439397532 10820.416516392053 1.0577028281626992 0.9555468882579181 1.1414278480033548 1.0071097440305374 1.0058158154351422 1.0367432971232993 1.1089690388052575 1.0057215433205893 1.0552618981149544 0.926702259955241 1.0 13.40146841425647 -10.899085961371506 1.0634883319040824 0.9991763702331593 1.041856385852521 0.18129795875447408 0.05376503568388818 1.062333313693268 2.0639198342336944 0.03490367326641364 0.0076887097714959845 1.261577801527174e-11 10.899085961371506 0.04268001561936163 ENQSEGKGSDS(ph)DSEGDNPEKK ddPTM_A549_MK2206_60min_R1 1 ENQSEGKGSDSDSEGDNPEKK 21 2 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 ENQS(0.01)EGKGS(0.088)DS(0.798)DS(0.104)EGDNPEKK 76.82600000000001 7.841e-05 3755000.0 456.36 657.62 637.55 580.18 666.05 471.44 515.77 539.67 812.87 1041.3 1221.0 True False 533.382411069221 691.0900490778746 727.9641767675018 722.3241260452694 568.0749273110999 521.327467883455 609.478732764982 616.1698751700595 628.7562428866547 806.0696067857415 917.7920021143278 0.5811582688021489 0.7529920150598421 0.79316901333906 0.787023774865376 0.6189582454438689 0.5680235463835673 0.6640706514775886 0.6713611294831313 0.6850748769200231 0.8782704631646275 1.0 9.842023424548149 -10.54974243125761 0.741160704682316 1.0117746419538383 0.6814455974088532 0.601233087318999 0.07921521682564614 0.32602035339101 0.30461094567273655 0.06288854253027504 0.015421370527620278 2.820054936515037e-11 10.54974243125761 -0.330329044544985 ENQSEGKGSDS(ph)DSEGDNPEKK ddPTM_A549_PD325901_60min_R1 2 ENQSEGKGSDSDSEGDNPEKK 21 2 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 ENQS(0.001)EGKGS(0.014)DS(0.967)DS(0.019)EGDNPEKK;ENQSEGKGS(0.017)DS(0.945)DS(0.038)EGDNPEKK 142.22 3.2755000000000004e-22 71957700.0 5173.9 5364.2 5608.3 4946.6 6452.4 6047.8 5223.2 5716.7 5814.5 6198.5 6875.299999999999 True False 5699.150519176131 5816.259959661539 5988.912963447579 5252.140247456302 5999.205683571577 5998.548721941702 5421.971734244708 5602.675933835608 5570.136785468419 5807.1256521573705 6029.6816861176 0.9451826507355329 0.9646048104085774 0.9932386608792493 0.8710476806012055 0.9949456697496669 0.9948367151374545 0.8992135931035881 0.9291827040778775 0.9237862088628639 0.963089919908603 1.0 12.557866127254941 -10.925117271442602 1.2049945787237588 0.9997323646686361 0.9449584456632124 0.0819253428084894 0.03946798640905538 0.5757361400757283 1.4969244617616024 0.025713074052165667 0.006191095477413052 1.188181342506659e-11 10.925117271442602 -0.05477391900542372 ENS(ph)FRR ddPTM_A549_MK2206_60min_R1 2 ENSFRR 6 1 Q92887;Q8N6F7-2 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 ENS(1)FRR;ENS(1)FRR 66.62100000000001 0.044831 84244000.0 4069.1 4676.0 3960.5 3886.9 5928.8 4293.3 4045.6 4199.9 6040.9 5978.4 5585.0 True False 4755.864600056463 4913.98842718917 4522.158453592175 4839.190674489571 5056.681373833868 4747.61415633811 4780.63315290539 4795.248686654312 4672.645795335035 4627.875287820876 4198.090361841542 1.1328637999993518 1.170529455929479 1.077194167780723 1.1527123661928045 1.2045194214484927 1.130898515070436 1.1387637570546023 1.1422452289833083 1.113040785831328 1.102376292298483 1.0 12.035517504931423 -10.181204439779773 0.5445602874362725 0.9912948825408174 1.147275537309349 0.3326629420774836 0.041438233817607015 0.3496678236063173 0.1869778998846934 0.02578797446181564 0.007320775693194146 6.588636687556499e-11 10.181204439779773 0.15598065476853162 ENS(ph)FRR ddPTM_A549_PD325901_60min_R1 2 ENSFRR 6 1 Q92887;Q8N6F7-2 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 ENS(1)FRR;ENS(1)FRR 68.214 0.022462 384740000.0 3461.6000000000004 3552.5 3499.3 3760.8999999999996 4126.1 4067.7999999999997 3094.0 3780.4 4029.8 3774.8999999999996 5024.4 True False 3813.0190837047676 3851.881642499832 3736.7835410003213 3993.2022513763804 3836.2969702722507 4034.673185474791 3211.7438631017635 3704.9969563335694 3860.441520006987 3536.5521697715376 4406.4306522957895 0.865330555405008 0.8741500653126058 0.8480295812787667 0.9062215127102673 0.8706132634297798 0.9156329700486017 0.7288765253637696 0.8408159003712524 0.8760926529039241 0.8025888636030076 1.0 12.10539478505037 -10.266297950675256 0.8029994175890413 0.9957270273101586 0.8580025277393043 0.0 0.07336115948738552 0.3483501059705226 0.42962980771547055 0.026279653808872913 0.009448736826450426 5.416291745378886e-11 10.266297950675256 -0.1377244995708543 ENS(ph)KETFSGK ddPTM_A549_PD325901_60min_R1 2 ENSKETFSGK 10 1 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 ENS(0.993)KET(0.007)FSGK;ENS(1)KETFSGK 74.678 0.00044560000000000004 20645900.0 8777.4 8420.0 9151.0 8472.099999999999 10017.4 9076.099999999999 8927.4 9613.3 9511.599999999999 10136.5 11299.099999999999 True False 9668.475186419631 9129.582949992571 9772.041889433294 8995.402375464868 9313.812382153914 9002.18725077136 9267.137092260722 9421.555190012046 9111.860529479987 9496.479660094086 9909.382330896298 0.9756889847992295 0.9213069639595595 0.9861403630542347 0.9077662032898107 0.9398983782384229 0.9084508953402262 0.9351881664073924 0.9507711858726791 0.9195185154043627 0.9583321485623953 1.0 13.274579419175323 -10.856096567712166 1.0127154924636468 1.001377970128856 0.9365294029060534 0.2049038294150508 0.026776977325457713 0.36317934310967565 0.6377071712014263 0.01745173356889719 0.0038962771295675113 1.3928470614802654e-11 10.856096567712166 -0.06484856722280274 ENS(ph)LQEDR ddPTM_A549_MK2206_60min_R1 2 ENSLQEDR 8 0 P41002 P41002 CCNF Cyclin-F 1 ENS(1)LQEDR;ENS(1)LQEDR 94.616 0.0025304999999999998 11686100.0 458.65999999999997 530.61 656.1500000000001 354.1 694.5699999999999 828.23 760.69 1002.69 1431.28 1394.5 1320.6100000000001 True False 536.0705948396198 557.6157825814473 749.2019364536064 440.85451589615326 592.3996730913151 915.8727488654209 898.8975264691519 1144.8243781093397 1107.0973652844984 1079.481481477688 992.6660900181841 0.5400311345679188 0.5617355001733086 0.7547371104818159 0.44411159032145187 0.5967763773218678 0.9226393024553136 0.9055386655271819 1.1532824477648553 1.1152767042381977 1.087456791697109 1.0 9.95516469978692 -7.452382184303374 1.866074753209541 1.0582584762898553 0.5752670298521769 0.8651231758654926 0.08997043456788859 0.09086756002509794 0.6255641139583421 0.014605986292319002 0.025170875631104376 3.528725011229294e-08 7.452382184303374 -0.48299144643767833 down ENS(ph)LQEDR ddPTM_A549_PD325901_60min_R1 2 ENSLQEDR 8 0 P41002 P41002 CCNF Cyclin-F 1 ENS(1)LQEDR;ENS(1)LQEDR 78.903 0.004194300000000001 22613900.0 803.11 997.29 954.79 1099.25 1009.31 762.14 849.71 1049.23 738.3199999999999 948.5600000000001 1256.35 True False 884.641135981666 1081.3351282895594 1019.587791018689 1167.1481759221158 938.4195475304732 755.9333845267117 882.0461790291533 1028.3022845449889 707.2909779769611 888.6677597177378 1101.8269146588286 0.8028857565669356 0.9814019914592353 0.9253611229259141 1.059284503213931 0.851694159078558 0.6860727165670845 0.8005306162831133 0.9332702540338598 0.6419256677860041 0.8065402540950873 1.0 10.105681894255659 -6.979824844210485 24.500589586951605 0.8217170046086726 0.9452839196925873 0.2368832901376705 0.10896506999866508 299.8387575137904 364119.8455567242 0.020648643842095908 0.03901867601902544 1.0475509518021466e-07 6.979824844210485 0.12356691508391471 ENS(ph)PAAFPDR ddPTM_A549_MK2206_60min_R1 1 ENSPAAFPDR 10 0 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 ENS(1)PAAFPDR 92.19 0.00062526 8821000.0 441.88 581.62 637.41 548.88 912.16 313.5 562.81 588.56 724.32 1068.7 726.9 True False 516.4585410712318 611.2219737001207 727.804322662338 683.3556246401596 777.9824723310451 346.6743619155423 665.0652918693596 671.9901823894055 560.2626765013614 827.2799277556151 546.3906685805936 0.9452184504045081 1.1186537560898413 1.33202187466528 1.250672209346788 1.4238575383288987 0.6344807513205311 1.2171973829587124 1.2298712643374614 1.0253884422235913 1.5140813621592621 1.0 9.093789034845885 -7.199499086291478 24.999999642504307 1.0239283072484116 1.2173674824124834 0.0 0.2360590923110016 280.39057254745364 113169.45497045059 0.02609805931929514 0.045203161132136904 6.316855082839658e-08 7.199499086291478 0.19343917516407183 ENS(ph)PAAFPDR ddPTM_A549_PD325901_60min_R1 2 ENSPAAFPDR 10 0 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 ENS(1)PAAFPDR;ENS(1)PAAFPDR 115.57 8.7295e-05 24004000.0 1630.68 1685.23 1487.79 1590.19 1605.53 1697.43 1580.0 1465.15 1367.11 1614.1 2038.33 True False 1796.225433156832 1827.250246415199 1588.7603762080619 1688.4124247164784 1492.7631115778115 1683.6066928611237 1640.1277646091753 1435.926433862061 1309.6551209530876 1512.185450535971 1787.6283320384696 1.004809221785246 1.0221645146625908 0.8887531864055688 0.9444985819793686 0.8350522783869636 0.9418102536679267 0.9174881239093496 0.8032578182650777 0.7326215955973694 0.8459171425257032 1.0 10.803831099895591 -5.759202304261371 0.927043665852701 0.8714492763404847 1.0516295147878612 0.3358434551325218 0.0714139131117402 1.4132812551563736 1.4398315429859398 0.015767010603242638 0.21391541801420075 1.7409956890265006e-06 5.759202304261371 0.1801802384473764 ENS(ph)PAAFPDREGVPPTALFHPMPVLPK ddPTM_A549_MK2206_60min_R1 1 ENSPAAFPDREGVPPTALFHPMPVLPK 27 1 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 ENS(0.993)PAAFPDREGVPPT(0.007)ALFHPMPVLPK 55.101000000000006 0.0015366 1975800.0 873.81 1224.4 1027.3 1072.4 1407.0 1120.5 1146.8 1232.4 1560.6 1326.3 1503.2 True False 1021.2877653966085 1286.7167301647603 1172.9865873943295 1335.1380481418655 1200.0321638416303 1239.070566272297 1355.1587155803584 1407.0964740667112 1207.1265917661035 1026.6879088446453 1129.9139537905464 0.9038633092108233 1.138774086157786 1.0381202776187393 1.1816280732376563 1.062056238721415 1.0966061283831043 1.1993468272820054 1.2453129455975782 1.0683349716290609 0.9086425611440531 1.0 10.141997196093438 -9.498758734380353 1.6925361932225613 1.0187519058698182 1.1102629191209696 0.2258012817348004 0.09360960060313926 0.4151373361819447 2.4143461693883315 0.01968146916019284 0.01601739162959817 3.171328756681765e-10 9.498758734380353 0.09151101325115141 ENS(ph)PAAFPDREGVPPTALFHPMPVLPK ddPTM_A549_PD325901_60min_R1 3 ENSPAAFPDREGVPPTALFHPMPVLPK 27 1 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 ENS(0.996)PAAFPDREGVPPT(0.004)ALFHPMPVLPK;ENS(1)PAAFPDREGVPPTALFHPMPVLPK;ENS(0.997)PAAFPDREGVPPT(0.003)ALFHPMPVLPK 120.98 5.7374e-18 15801000.0 5922.0 5828.799999999999 6791.200000000001 7158.6 7462.6 7794.900000000001 6690.0 7426.5 7458.900000000001 7172.5 7820.1 True False 6523.197080454016 6320.013432175375 7252.091670803128 7600.7704636398075 6938.452720572386 7731.420918790862 6944.591610908465 7278.372631523455 7145.4283720234525 6719.627125933494 6858.277275698259 0.951142221030991 0.9215161735396471 1.0574217663232017 1.108262346081065 1.0116903183775061 1.1273123858941247 1.0125854251352675 1.0612537724763287 1.0418692748604217 0.979783531025195 1.0 12.74363051733872 -5.759442651424412 24.99999999996556 1.0368388224858933 0.9363291679075061 0.47459139853559984 0.04327898593408778 32.883325024930194 411682.74122009304 0.005767634906190434 0.020292813636933974 1.740032454110817e-06 5.759442651424412 -0.10050965457838723 ENS(ph)PNSFPR ddPTM_A549_MK2206_60min_R1 2 ENSPNSFPR 9 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 ENS(0.5)PNS(0.5)FPR;ENS(0.958)PNS(0.042)FPR 112.93 0.0002588 19677100.0 1750.3899999999999 2227.31 1876.52 1568.46 2964.3 2310.36 1802.8600000000001 2346.6400000000003 2934.8 2641.9 2913.9 True False 2045.8130390732185 2340.670565389802 2142.6387530197685 1952.7327704108457 2528.255396784465 2554.8407617071503 2130.4163254021687 2679.2834062836 2270.0724859125726 2045.0929551207632 2190.2982104512184 0.9340340184324787 1.068653827237345 0.978240653622398 0.8915373993793144 1.1542973393854095 1.1664351226314673 0.97266039630434 1.2232505115053018 1.0364216502943313 0.9337052577418022 1.0 11.096911591680302 -5.24999803761594 23.433032544236493 1.037613074641418 0.9340338941120161 0.08909308528139481 0.0985947451855636 1341.4872427427479 2747374.677106597 0.012436894186920674 0.24739834776817446 5.623438661670177e-06 5.24999803761594 -0.10357918052940196 ENS(ph)PNSFPR ddPTM_A549_PD325901_60min_R1 2 ENSPNSFPR 9 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 ENS(0.5)PNS(0.5)FPR;ENS(0.964)PNS(0.036)FPR 99.28299999999999 0.00081049 19932400.0 2185.92 2287.89 2278.95 2470.7799999999997 2796.5 2061.59 2146.8900000000003 2479.37 2161.75 2825.66 2843.92 True False 2407.8329892107463 2480.6985196506516 2433.6132514396268 2623.394469051486 2600.0834874012626 2044.8010945579872 2228.5910737732847 2429.917020321863 2070.899165188126 2647.2473453698462 2494.135869094231 0.9653976830400878 0.9946124228394745 0.9757340334163176 1.0518250034246115 1.0424786875566274 0.8198435056790133 0.8935323457669604 0.9742520647859936 0.8303072783040455 1.061388586793878 1.0 11.28432434338592 -7.235470217013192 24.767021559215383 0.914087474278212 1.006239721052708 0.20597362467442581 0.07080515702207694 699.3006391405311 666929.4724016804 0.010477559290593727 0.018143863267204338 5.814733071370598e-08 7.235470217013192 0.09215224677449607 ENS(ph)PVQS(ph)IRSPK ddPTM_A549_MK2206_60min_R1 1 ENSPVQSIRSPK 12 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 2 ENS(0.998)PVQS(0.601)IRS(0.401)PK 42.277 0.024761000000000002 5022700.0 828.39 916.55 771.7 918.37 1171.4 1086.0 859.34 921.47 1236.4 1161.7 976.4 True False 968.2019798089929 963.1984800984251 881.1386639659338 1143.370691227196 999.0886117441963 1200.9197991715434 1015.4709545228691 1052.091194383521 956.3573741250872 899.2711631643095 733.9329327309005 1.3191968048175706 1.3123794247990037 1.200571093992599 1.5578680833585343 1.3612805301251092 1.6362800272540239 1.3836018377651895 1.433497731827868 1.3030582652376217 1.2252770288127008 1.0 9.519504424454537 -10.004161856387714 0.7184220469422521 1.0148238432531134 1.4013116663919845 0.3807011226467064 0.12933214830445144 0.3185744448103358 0.33017650078624294 0.060422775925574566 0.02525206230151548 9.904627424152595e-11 10.004161856387714 0.3864878231388711 ENS(ph)PVQSIR ddPTM_A549_MK2206_60min_R1 2 ENSPVQSIR 9 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 ENS(0.99)PVQS(0.01)IR;ENS(0.999)PVQS(0.001)IR 112.64 0.00027041 9472400.0 1802.56 2125.02 1909.06 1837.36 3295.1 2365.8999999999996 2537.4 2762.8 3288.6 2733.5 3044.6 True False 2106.7880596391765 2233.1744413057177 2179.7934143200805 2287.5132824822244 2810.395154992577 2616.2579676426826 2998.412735362403 3154.435360720145 2543.7373508150777 2116.0004515018 2288.5417933147273 0.9205809855837073 0.9758067114305063 0.9524813663825927 0.9995505824558208 1.2280287662660494 1.1431986845445765 1.3101848277891825 1.3783603908544997 1.1115101145392345 0.9246064274128819 1.0 11.16021292331569 -6.568509054661583 9.302650233502499 1.1157552556835482 0.9561380074611622 0.3345199910408817 0.12495309390146575 0.3878462354111977 75.04254460680261 0.0197099684968827 0.04112217608572188 2.700790798602481e-07 6.568509054661583 -0.159617248222386 ENS(ph)PVQSIR ddPTM_A549_PD325901_60min_R1 2 ENSPVQSIR 9 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 ENS(0.936)PVQS(0.064)IR;ENS(0.95)PVQS(0.05)IR 101.71 0.00072233 11657500.0 2488.2 1773.29 2311.45 2859.8 2504.2 3385.7 2305.49 2531.8999999999996 2560.4 2395.8 3324.5 True False 2740.8002322839743 1922.7313716617969 2468.318896878003 3036.443350922964 2328.313631021006 3358.127981725259 2393.226683562534 2481.399268262875 2452.795292030845 2244.5287791302135 2915.6075757418503 0.9400442827380849 0.6594616462308289 0.8465881751078801 1.0414444578160929 0.7985689330734392 1.1517763946236192 0.8208329212320691 0.851074502929807 0.8412638629554778 0.7698322633693642 1.0 11.509580838816087 -10.884093531853813 1.11901422561077 1.0003915028211972 0.8799998643321767 0.0 0.14016624786478143 0.8989665064380299 1.9886134274425948 0.08431626181660631 0.020009976286225414 1.3058896148594983e-11 10.884093531853813 -0.12039163848902046 ENS(ph)PVQSIRS(ph)PK ddPTM_A549_MK2206_60min_R1 1 ENSPVQSIRSPK 12 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 2 ENS(1)PVQS(0.352)IRS(0.649)PK 48.907 0.0094054 6429700.0 1443.1 1720.6 1343.7 1391.7 2457.7 1829.5 1067.8 1658.3 2199.3 2501.8 2245.8 True False 1686.659999592412 1808.1711907232016 1534.2568650654737 1732.666562475788 2096.1755856955037 2023.0964756761869 1261.8054381729214 1893.3691033307578 1701.1620615604206 1936.6416424244396 1688.105879073183 0.9991434900507753 1.0711242778894519 0.9088629357228608 1.0263968533935028 1.241732293975756 1.1984416977369472 0.7474681853875704 1.1215938092522195 1.0077342201393231 1.1472275918425863 1.0 10.7211896782945 ENS(ph)SSQDPQTEGTR ddPTM_A549_PD325901_60min_R1 2 ENSSSQDPQTEGTR 14 0 A0A0C4DG49;P15151-3;P15151-2;P15151 A0A0C4DG49 PVR Poliovirus receptor 1 ENS(0.777)S(0.11)S(0.11)QDPQT(0.002)EGTR;ENS(0.74)S(0.129)S(0.129)QDPQT(0.001)EGTR 62.891000000000005 0.0058678 44262000.0 148.97 351.96000000000004 0.0 338.82 406.57 221.68 340.71999999999997 405.72 406.5 0.0 179.29 True False 164.09332473408227 381.62090440372765 0.0 359.7481418839494 378.0139257903562 219.8747115777697 353.68628604913823 397.62759631881715 389.4162186418283 0.0 157.23846661295127 1.0435952999847329 2.427020007407619 0.0 2.2879143356789644 2.4040804641071225 1.398351919311195 2.2493623454097342 2.528818837298848 2.4765963891036398 0.0 1.0 7.296810389578664 ENS(ph)SYR ddPTM_A549_MK2206_60min_R1 1 ENSSYR 6 0 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 ENS(0.812)S(0.187)Y(0.001)R 63.419 0.059947 9407800.0 2506.1 2240.2 1904.7 1370.3 2440.7 1990.0 2031.7 1939.1 2922.2 3868.7 3819.1 True False 2929.0684117376068 2354.2166113321596 2174.8151007592523 1706.0235615151037 2081.6762631757383 2200.580479144909 2400.8335912492294 2213.973363244692 2260.3263657945085 2994.757983071158 2870.7120682021523 1.0203281771731296 0.8200810653945313 0.7575873334176907 0.5942858499854843 0.7251428264902354 0.76656259034821 0.8363198865683541 0.7712279429790541 0.7873748087909382 1.0432108521934393 1.0 11.487192920463773 -10.557305202629674 0.6359189961711795 1.0188109990661693 0.7760451610012257 0.4574139758948522 0.09726918911460804 0.7514742776668684 0.48405229015200796 0.09941566666711767 0.0209701512763957 2.7713718246731237e-11 10.557305202629674 -0.24276583806494367 ENS(ph)TVDFSK ddPTM_A549_PD325901_60min_R1 2 ENSTVDFSK 9 0 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q6U841-2;Q6U841-4;Q6U841;F8WDX9;Q6U841-3;C9J240;E7EW28;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7;SLC4A10 Sodium bicarbonate cotransporter 3;Anion exchange protein;Sodium-driven chloride bicarbonate exchanger 1 ENS(0.472)T(0.472)VDFS(0.057)K;ENS(0.701)T(0.298)VDFSK 117.09 0.00018325 34132000.0 11958.4 13710.0 13479.3 13950.099999999999 16111.699999999999 13588.4 14635.5 14651.7 15693.7 16832.1 18114.8 True False 13172.407964691198 14865.389815249182 14394.08635561558 14811.765994024203 14980.06977434756 13477.74057561966 15192.461961352905 14359.460349463703 15034.148365311852 15769.318333415833 15886.79443917838 0.829141965367586 0.9357073179337982 0.9060409518561129 0.9323319471860823 0.942925889278535 0.8483612365740846 0.956294992014677 0.9038614054231027 0.946329885671346 0.9926054241960329 1.0 13.95554043354748 -14.999999999999998 0.09274402680012371 1.3076004321385508 0.8412510416629866 0.49906102309256417 0.03568114537985102 68.24065967543217 0.4600698266514872 4.0563747447521195 0.2981449362580543 1.000000000000004e-15 14.999999999999998 -0.46634939047556423 ENSFGS(ph)PLEFR ddPTM_A549_MK2206_60min_R1 4 ENSFGSPLEFR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ENS(0.01)FGS(0.99)PLEFR;ENS(0.004)FGS(0.996)PLEFR;ENSFGS(1)PLEFR;ENS(0.001)FGS(0.999)PLEFR 164.88 8.4362e-14 59246300.0 5364.59 6323.34 4630.75 4378.3099999999995 7475.789999999999 6886.09 6065.530000000001 6289.92 8782.779999999999 7516.110000000001 7345.8 True False 6270.001640366886 6645.170996831132 5287.459982065891 5450.996146549803 6376.111194119132 7614.771473183403 7167.558287507966 7181.53542207212 6793.4943532176685 5818.215530834903 5521.635126233768 1.1355334963329184 1.2034788327934505 0.9575895294031129 0.9872068729517542 1.1547505491309402 1.3790790769576502 1.2980861870887257 1.3006175268539608 1.2303410489659463 1.0537124235522293 1.0 12.430879841373796 -4.994059145897919 17.066928529930312 1.1424985337386788 1.1268100695036911 0.0 0.13593452630045433 16055.404024869884 627.0947829713665 0.020846418605908378 5524.490149039988 1.0137733121058116e-05 4.994059145897919 -0.01568846423498771 ENSGPVENGVS(ph)DQEGEEQAR ddPTM_A549_MK2206_60min_R1 2 ENSGPVENGVSDQEGEEQAR 20 0 Q8TEQ6 Q8TEQ6 GEMIN5 Gem-associated protein 5 1 ENSGPVENGVS(1)DQEGEEQAR;ENSGPVENGVS(1)DQEGEEQAR 167.16 2.6072e-28 8625800.0 253.96 701.48 227.04 131.74 806.26 382.91 793.19 678.35 688.0799999999999 614.3499999999999 379.82 True False 296.8222392741245 737.1823357366685 259.237685974894 164.01630591403338 687.6602220461633 423.4292820449129 937.3023557823382 774.5081898597481 532.2309786379731 475.5679083153944 285.5002115012807 1.0396568104566641 2.5820728183010875 0.9080122379304476 0.5744875110654607 2.4086154557650077 1.4831137245690393 3.283018078528231 2.7128112647870095 1.8642051991460102 1.6657357478464112 1.0 8.15734800412549 -6.7692962562168715 24.992491930675847 1.7249482256227653 1.3430551999510387 0.09950908047731466 0.7911420758181348 541.5166772245367 1722553.5906179752 0.12967006107626255 0.24824989500721703 1.7009977681520656e-07 6.7692962562168715 -0.38189302567172656 ENSGPVENGVS(ph)DQEGEEQAR ddPTM_A549_PD325901_60min_R1 2 ENSGPVENGVSDQEGEEQAR 20 0 Q8TEQ6 Q8TEQ6 GEMIN5 Gem-associated protein 5 1 ENSGPVENGVS(1)DQEGEEQAR;ENSGPVENGVS(1)DQEGEEQAR 98.816 5.6274e-07 11257700.0 335.33 486.17 604.74 549.19 526.3299999999999 493.69000000000005 162.66 408.22 0.0 438.36 901.24 True False 369.3724547431014 527.1412521137635 645.7812929970378 583.1122189990149 489.36239653992726 489.6695523223976 168.85011531096737 400.0777318576054 0.0 410.68187478901444 790.3931934310682 0.46732747424059784 0.6669354651517967 0.8170380240671413 0.73774954522033 0.6191379184524892 0.6195265298234158 0.21362799770326354 0.5061755784116542 0.0 0.5195918666837949 1.0 9.626426712803685 -4.978196441640522 16.02174024516294 0.5483045795692099 0.28632936832657313 0.006453721968336823 0.2613852305625166 5941261.076050105 109728060.73297824 0.0501163176164737 38674904.05202426 1.0514861542463462e-05 4.978196441640522 -0.26197521124263673 ENSLCGS(ph)APNSR ddPTM_A549_MK2206_60min_R1 2 ENSLCGSAPNSR 12 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 ENSLCGS(0.986)APNS(0.013)R;ENS(0.022)LCGS(0.715)APNS(0.263)R 58.071000000000005 0.012896000000000001 3475100.0 968.36 1126.26 1025.21 1111.07 1795.01 1225.1799999999998 1383.53 1536.45 1994.04 1749.6100000000001 1535.52 True False 1131.7954938710463 1183.581823354593 1170.6001939672346 1383.2821998778277 1530.9664068353682 1354.8277343913364 1634.8994922976062 1754.246492680784 1542.3931238275554 1354.371885843082 1154.2080058039246 0.980581912601388 1.0254493275067946 1.014202109221979 1.198468727406157 1.3264215801111388 1.1738159218950115 1.4164686816211018 1.5198703213455211 1.3363216301322165 1.1734209770098936 1.0 10.17268752762285 -6.277578604238627 4.674196776760892 1.2219393788149269 1.0064731858912552 0.39179833967431255 0.13673738604264118 0.23455690320842792 14.030665597740478 0.025644194393966563 0.06474393925348684 5.277416806144418e-07 6.277578604238627 -0.21546619292367164 ENSLCGS(ph)APNSR ddPTM_A549_PD325901_60min_R1 1 ENSLCGSAPNSR 12 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 ENS(0.06)LCGS(0.91)APNS(0.03)R 45.992 0.042807 1835200.0 782.92 821.74 533.32 716.87 731.35 605.4 604.68 867.89 814.04 668.8 1031.0 True False 862.401462044758 890.9909136967813 569.5143023136889 761.1494317701048 679.9824990205308 600.46982311973 627.6914282935923 850.579253103466 779.8287297003541 626.5718538618777 904.1935360474811 0.9537797248745997 0.9853984552815842 0.629858851682592 0.8417992403455262 0.7520320284448743 0.6640943550034382 0.6942003047681938 0.9407048592955218 0.8624577577818513 0.6929621025613869 1.0 9.820487793844384 -9.630396059904859 0.6998519396402132 0.9841824846299735 0.7971300570609794 0.0 0.14194063142218158 0.5945874979832562 0.625871911443192 0.048154252876482874 0.026873901127221538 2.34209194310254e-10 9.630396059904859 -0.1870524275689941 ENSQLDT(ph)SPPCLGGNKK ddPTM_A549_MK2206_60min_R1 1 ENSQLDTSPPCLGGNKK 17 1 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 ENS(0.005)QLDT(0.548)S(0.447)PPCLGGNKK 49.973 0.012333 6359400.0 1614.8 1624.2 1888.6 1596.6 2815.6 2478.5 1750.1 1635.4 2903.7 2641.3 3058.7 True False 1887.3387619304458 1706.8648424808928 2156.4318786653653 1987.7670716740977 2401.4289698027656 2740.773224904854 2068.0705163386683 1867.2229582024497 2246.016586256078 2044.6284955374822 2299.1403741745235 0.8208888779172826 0.7423926184123144 0.9379296292161388 0.86456968613227 1.0444899305745816 1.192086075165764 0.8994972814920804 0.8121396062529901 0.9768940650535447 0.8893012877787332 1.0 11.166878837252751 -6.062113837746817 1.597594537364832 0.9844625553986714 0.7805689542736045 0.28685394951880294 0.10075827619122528 0.34199050338852194 1.5938475755530304 0.014208854546046347 0.0667170703001163 8.667346565394666e-07 6.062113837746817 -0.20389360112506694 ENSQLDT(ph)SPPCLGGNKK ddPTM_A549_PD325901_60min_R1 2 ENSQLDTSPPCLGGNKK 17 1 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 ENS(0.002)QLDT(0.566)S(0.431)PPCLGGNKK;ENS(0.011)QLDT(0.511)S(0.478)PPCLGGNKK 62.361999999999995 0.0019616 14719500.0 9558.400000000001 10393.8 9761.7 9519.0 10508.8 10066.9 9113.1 10411.9 10301.1 11017.0 11828.2 True False 10528.761731477822 11269.722003044275 10424.187663870734 10106.967010782459 9770.698141391877 9984.918504070054 9459.904007379668 10204.226486522462 9868.180590040196 10321.384739827023 10373.40638513755 1.0149763096684283 1.0864051387392781 1.00489533301288 0.974315151218135 0.9418987147163924 0.9625496325272573 0.9119380516060087 0.9836909986619747 0.9512960568265006 0.9949850952156795 1.0 13.34060209896325 -6.016315731012057 3.723598848397433 0.9689175763957595 1.050899130732613 0.5726893988705044 0.02845810837751709 0.1236383535982263 3.719605963720207 0.004172501600300652 0.01317299577354066 9.631285769547442e-07 6.016315731012057 0.0819815543368535 ENSQLDTS(ph)PPCLGGNKK ddPTM_A549_MK2206_60min_R1 1 ENSQLDTSPPCLGGNKK 17 1 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 ENSQLDT(0.218)S(0.781)PPCLGGNKK 69.122 0.00065613 6453100.0 3644.0 4855.9 4222.1 3950.0 6030.4 4218.4 4218.4 4952.5 7413.0 6312.0 6638.7 True False 4259.01811275362 5103.044568774142 4820.857267241899 4917.7501773222375 5143.336148422577 4664.788288052708 4984.828676145961 5654.532041395155 5733.967336128494 4886.114816125612 4990.127571200969 0.8534888240800237 1.022628078333075 0.9660789626028874 0.9854958830518811 1.0307023367710688 0.9348034136389899 0.9989381243306105 1.1331437845454289 1.149062274323481 0.9791562933830319 1.0 12.284860982787034 -8.076026913910585 6.335106900432312 1.0768809054785775 0.9715710072188413 0.3375394391229325 0.06430084207210002 0.20650725974666798 14.018726476467931 0.011092014568229384 0.014404058622653195 8.394079654785914e-09 8.076026913910585 -0.10530989825973625 ENSRRIT(ph)T(ph)EK ddPTM_A549_PD325901_60min_R1 1 ENSRRITTEK 10 2 Q562F6-2;Q562F6;C9JW92;Q562F6-3 Q562F6-2 SGOL2 Shugoshin-like 2 2 ENS(0.289)RRIT(0.715)T(0.996)EK 43.628 0.050276999999999995 21318000.0 4409.3 6101.7 7676.8 6235.0 9884.2 7641.3 8147.4 10159.0 6592.6 5702.8 5556.3 True False 4856.928890044902 6615.9116729180105 8197.793812348551 6620.121789287599 9189.967890638864 7579.071786264938 8457.453765428352 9956.370775418676 6315.535948384058 5342.724234754061 4872.910324287698 0.9967203512522812 1.357692063394394 1.6823198595485893 1.358556047356628 1.885930025191304 1.5553480942362334 1.735606280968166 2.0432082909044826 1.2960501072441215 1.0964134119449527 1.0 12.250567957654894 -9.14358713584744 2.7087682726770885 1.1088642240940838 1.581938121899065 0.34581114021918746 0.2739409748197557 0.1978382886129386 3.0163198904203976 0.054522105722395596 0.05232378463003747 7.184769903448947e-10 9.14358713584744 0.4730738978049811 ENSS(ph)PENKNWLLAMAAK ddPTM_A549_MK2206_60min_R1 1 ENSSPENKNWLLAMAAK 17 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ENS(0.021)S(0.979)PENKNWLLAMAAK 174.63 1.3850999999999998e-30 8191700.0 6574.4 6555.0 5647.4 6011.2 9015.6 7816.2 7984.1 7713.4 11078.0 9606.3 10685.0 True False 7683.997991352193 6888.62150133127 6448.286239317368 7483.944269853025 7689.417182893108 8643.305096026348 9434.707622135633 8806.798071296791 8568.850687930857 7436.230158134894 8031.6196090021185 0.95671836633544 0.8576877188768084 0.802862505102944 0.9318100998539273 0.9573930984324185 1.0761596685105246 1.1746955261129255 1.0965158336714336 1.066889507357469 0.925869316544836 1.0 12.971475227107918 -6.902009796671081 2.2646928510202247 1.0518965320908626 0.8742714595161962 0.5744996504817051 0.0683913031416039 0.15644509122334824 1.62609763858941 0.0097163789622557 0.020383773382117876 1.2531129073166698e-07 6.902009796671081 -0.17762507257466642 ENSS(ph)PENKNWLLAMAAK ddPTM_A549_PD325901_60min_R1 1 ENSSPENKNWLLAMAAK 17 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ENS(0.133)S(0.867)PENKNWLLAMAAK 197.92 1.1401999999999999e-48 12941000.0 11018.0 11529.0 10053.0 11113.0 10777.0 12165.0 11380.0 9848.4 12641.0 12342.0 13292.0 True False 12136.539248977097 12500.589291029017 10735.257033599924 11799.424770545811 10020.060698631654 12065.93227329289 11813.072127374937 9651.965936079656 12109.742730261636 11562.724013701101 11657.168264930277 1.0411224212563674 1.072352136207565 0.9209146500781109 1.0122033501089198 0.8595621570271282 1.0350654635047476 1.0133740766969699 0.8279854692598783 1.0388237052983869 0.9918981823816249 1.0 13.508929754168307 ENSS(ph)SQDPQTEGTR ddPTM_A549_MK2206_60min_R1 1 ENSSSQDPQTEGTR 14 0 A0A0C4DG49;P15151-3;P15151-2;P15151 A0A0C4DG49 PVR Poliovirus receptor 1 ENS(0.048)S(0.471)S(0.471)QDPQT(0.008)EGT(0.001)R 59.185 0.008662399999999999 15243000.0 218.79 0.0 124.6 148.3 179.9 157.33 128.58 147.22 0.0 277.37 0.0 True False 255.71640309806926 0.0 142.27015359615837 184.63350665743994 153.436948312089 173.97855617279828 151.94132163352157 168.08888584234106 0.0 214.71192435816883 0.0 0.0 ENSTSSGPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ENSTSSGPSPR 11 0 Q5T7B8-4;Q5T7B8-2;Q5T7B8 Q5T7B8-4 KIF24 Kinesin-like protein KIF24 1 ENSTSS(0.002)GPS(0.997)PR 74.46 0.0014065 721430.0 466.8 425.52 385.91 347.23 375.33 452.42 321.27 384.48 398.99 366.67 636.98 True False 514.1891923600024 461.38006376256993 412.10017326534876 368.67760848345375 348.96811561820715 448.73564151937313 333.4961056556898 376.81124478127487 382.2218378251 343.5183936237064 558.6354981489079 0.9204377345582538 0.8259053806845373 0.7376906312450284 0.6599609400138413 0.6246794497924789 0.8032709038475027 0.5969833760309916 0.6745207671726464 0.6842061399456866 0.614924033223788 1.0 9.125763441473874 -10.696034056230529 0.9257804462038397 1.0022603751549723 0.7201636629107792 0.0 0.14414725029108305 0.3539290987661628 0.5327763455002765 0.06694629938495217 0.01701038152196057 2.013566345096667e-11 10.696034056230529 -0.2820967122441932 ENT(ph)PSEANLQEEEVR ddPTM_A549_MK2206_60min_R1 1 ENTPSEANLQEEEVR 15 0 B4E3T4;Q93062-4;Q93062-5;Q93062;Q93062-2;Q93062-3 B4E3T4 RBPMS RNA-binding protein with multiple splicing 1 ENT(0.5)PS(0.5)EANLQEEEVR 50.284 0.025025 692540.0 289.23 256.15 0.0 292.33 200.59 237.24 230.36 288.9 313.48 310.2 310.73 True False 338.0449530054141 269.1869408948901 0.0 363.95086312319245 171.08347671996623 262.34457933283306 272.21343017186206 329.8524597191437 242.47728052469446 240.12560455674353 233.56716528827596 1.447313677794515 1.1525033519272758 0.0 1.5582278556748026 0.7324808540995461 1.1232083028838369 1.165461034884281 1.4122381427716066 1.0381479786571086 1.0280794574030683 1.0 7.8676936651687175 ENT(ph)PSEANLQEEEVR ddPTM_A549_PD325901_60min_R1 1 ENTPSEANLQEEEVR 15 0 B4E3T4;Q93062-4;Q93062-5;Q93062;Q93062-2;Q93062-3 B4E3T4 RBPMS RNA-binding protein with multiple splicing 1 ENT(0.5)PS(0.5)EANLQEEEVR 71.344 0.0016253 1176400.0 198.63 219.26 255.97 379.91 286.82 173.99 149.29 363.32 261.22 221.03 220.12 True False 218.79477137632244 237.73780969303687 273.34166347265216 403.3761778617884 266.6747526752836 172.57308312620071 154.97131264462257 356.0732975809737 250.24183181701943 207.0741280787842 193.04663545564634 1.133377802000553 1.2315045487941623 1.4159359101363571 2.089527107839528 1.381400675778956 0.8939450445167196 0.8027661931472936 1.8444936724255097 1.2962765770373348 1.0726637508601427 1.0 7.5928056000309105 -7.013837318328822 24.76078097884579 1.157583963260288 1.4830877191041825 0.16270771723391464 0.3406404506005588 833.6639562415781 1491778.1966684929 0.05155714446972857 0.091791017649896 9.686406298465718e-08 7.013837318328822 0.32550375584389446 ENTHQT(ph)LK ddPTM_A549_MK2206_60min_R1 1 ENTHQTLK 8 0 C9JRZ6;Q9NX63 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 ENTHQT(1)LK 63.623999999999995 0.0087288 3433600.0 1315.6 1224.3 803.5 1133.4 1186.0 904.42 966.01 1259.5 1591.3 1267.0 1385.2 True False 1537.641116668128 1286.611640591896 917.4483821389507 1411.0830508802594 1011.5409710846999 1000.1251240945918 1141.521512764024 1438.0379820569808 1230.8730907839297 980.7838200302839 1041.2166104248706 1.4767735178952728 1.2356810559014146 0.8811311430813459 1.3552252593285694 0.9714990722938414 0.960535122164915 1.096334327876525 1.3811131782369341 1.1821489193124468 0.941959444567517 1.0 10.024054516870612 -5.394623306722266 3.716915312866554 1.0987190969695568 1.4750129474991194 0.3465324382385615 0.15736288273480295 0.20011541649899028 4.40207253998816 0.02045777213993277 0.15708579725718094 4.030664898567705e-06 5.394623306722266 0.37629385052956255 ENTLFDIHRS(ph)PAR ddPTM_A549_MK2206_60min_R1 4 ENTLFDIHRSPAR 13 1 Q9ULI0-2;Q9ULI0;C9JG15 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 ENT(0.042)LFDIHRS(0.958)PAR;ENTLFDIHRS(1)PAR;ENT(0.036)LFDIHRS(0.964)PAR;ENTLFDIHRS(1)PAR 114.96 5.3422e-06 74415000.0 4367.6900000000005 5256.67 5395.67 5027.0599999999995 6114.23 5606.789999999999 4907.459999999999 5924.09 7210.74 7396.17 7354.69 True False 5104.84929223185 5524.212049947069 6160.85714008173 6258.689925673302 5214.834866471503 6200.096796314009 5799.081958808845 6763.847899264735 5577.518903185644 5725.370060136847 5528.3174938822485 0.9234001661230533 0.999257379132128 1.1144181112787865 1.1321147768013142 0.94329511144075 1.1215160495349925 1.0489777342249664 1.2234912171288552 1.0088998885027576 1.0356442202302347 1.0 12.432624757424485 -8.957640763723845 24.999869487347638 1.0039259853857636 1.0659806508018628 0.058809723285904725 0.08298803824409622 235.48039126084151 138977.97313030288 0.013933262585254099 0.014821209003136646 1.1024508490671393e-09 8.957640763723845 0.062054665416099164 ENTLFDIHRS(ph)PAR ddPTM_A549_PD325901_60min_R1 4 ENTLFDIHRSPAR 13 1 Q9ULI0-2;Q9ULI0;C9JG15 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 ENT(0.006)LFDIHRS(0.994)PAR;ENTLFDIHRS(1)PAR;ENT(0.008)LFDIHRS(0.992)PAR;ENTLFDIHRS(1)PAR 103.5 4.6558000000000004e-05 131583000.0 10471.48 10147.4 11261.169999999998 10300.8 12709.93 11506.58 11065.710000000001 10628.2 12232.64 11009.310000000001 12635.439999999999 True False 11534.536940903854 11002.557010303397 12025.420715116337 10937.057021185843 11817.22836367815 11412.874227474435 11486.82164943886 10416.212213338391 11718.544680951485 10314.180287739406 11081.360982653518 1.0408953339720388 0.9928886016371564 1.0851934824558669 0.9869777763134362 1.0664058667682192 1.0299162932549404 1.0365894286288517 0.939975895527965 1.057500491076448 0.9307683689652347 1.0 13.435847459704169 ENTLFDIHRS(ph)PARR ddPTM_A549_MK2206_60min_R1 2 ENTLFDIHRSPARR 14 2 Q9ULI0-2;Q9ULI0;C9JG15 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 ENTLFDIHRS(1)PARR;ENTLFDIHRS(1)PARR 98.06200000000001 8.243099999999999e-06 22598000.0 1373.82 1599.9699999999998 1188.44 1274.6799999999998 2497.8 1723.31 1294.5300000000002 1568.3600000000001 2235.8999999999996 2415.6000000000004 2670.5 True False 1605.6872293257902 1681.4016389755907 1356.9786624383503 1586.97665722256 2130.3769288156523 1905.669520359403 1529.7293443322665 1790.6798329010603 1729.4722199986109 1869.914282292939 2007.341147949477 0.7999074950294417 0.8376262503726197 0.6760079938701601 0.7905864226634699 1.0612929102718078 0.9493501004082275 0.7620674472273451 0.8920655239545411 0.8615736402181997 0.93153786251185 1.0 10.97107010845288 -14.99999999993701 0.07305682943198036 1.510632013412507 0.6683344288878985 0.24161789138514222 0.09308459796830747 182.40221740611395 0.9935829004447873 15.753147191123755 1.9537368342116013 1.0000000001450389e-15 14.99999999993701 -0.8422975845246086 ENTLFDIHRS(ph)PARR ddPTM_A549_PD325901_60min_R1 2 ENTLFDIHRSPARR 14 2 Q9ULI0-2;Q9ULI0;C9JG15 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 ENTLFDIHRS(1)PARR;ENTLFDIHRS(1)PARR 119.48 5.3425e-07 43205000.0 2095.0299999999997 2623.7 2364.36 2296.04 2301.5 2168.84 2440.4 2777.5 2310.89 2410.41 2845.2 True False 2307.7159033204275 2844.8084068759517 2524.8196876516804 2437.8611761148186 2139.850579743968 2151.1776861166095 2533.270757438121 2722.1005835934006 2213.771329636445 2258.2163012368555 2495.2584372088177 0.9248404369295814 1.1400856778819828 1.0118469694369332 0.9769974683831935 0.857566714467297 0.8621061666553886 1.0152338209391343 1.090909279376419 0.8871912009694505 0.9050029718616577 1.0 11.284973529792076 -6.260548993507032 3.593861266972439 0.94959863384854 1.039677210322058 0.14999909970696124 0.08137632511075402 0.316796787896096 8.930656556885031 0.011774867308828221 0.031637285062810196 5.488466357820492e-07 6.260548993507032 0.09007857647351791 ENTPS(ph)EANLQEEEVR ddPTM_A549_MK2206_60min_R1 1 ENTPSEANLQEEEVR 15 0 B4E3T4;Q93062-4;Q93062-5;Q93062;Q93062-2;Q93062-3 B4E3T4 RBPMS RNA-binding protein with multiple splicing 1 ENT(0.319)PS(0.681)EANLQEEEVR 45.863 0.037995 835900.0 190.68 184.8 145.6 0.0 201.41 0.0 156.16 381.09 357.41 204.61 157.61 True False 222.86212232158616 194.20553065538047 166.24826937079175 0.0 171.7828558062137 0.0 184.53225063221907 435.1106745391778 276.45720566648913 158.38845889218348 118.47108718529009 1.881151997643335 1.6392652019107488 1.4032813686496994 0.0 1.4499981378371536 0.0 1.5576142248412779 3.672716144308357 2.3335415605168457 1.3369376668626514 1.0 6.888391202789153 -7.989709472066626 24.94793298270337 1.8393387656470104 1.0488020240373093 0.21961896048799223 0.8576099974162719 334.66506006957235 811344.5380915544 0.14922524313574237 0.20606834616077802 1.023977768792861e-08 7.989709472066626 -0.7905367416097011 ENTPS(ph)EANLQEEEVR ddPTM_A549_PD325901_60min_R1 1 ENTPSEANLQEEEVR 15 0 B4E3T4;Q93062-4;Q93062-5;Q93062;Q93062-2;Q93062-3 B4E3T4 RBPMS RNA-binding protein with multiple splicing 1 ENT(0.094)PS(0.906)EANLQEEEVR 67.93 0.0028052 970330.0 370.7 165.44 184.04 332.49 256.78 173.33 351.61 247.0 169.41 445.17 149.07 True False 408.3331911050835 179.38220941173046 196.53006112242423 353.02715216042236 238.74465864290954 171.91845794737833 364.99071095837473 242.07339123224853 162.29028683914436 417.0618902268123 130.73533503258773 3.123357514655853 1.372101959787817 1.5032665887415686 2.700319328913068 1.8261677960545164 1.3150114152728878 2.7918290863552335 1.8516294096917878 1.2413651351311494 3.190123696266609 1.0 7.030505313972816 -8.758982155192902 3.449572053018678 1.1040942331864765 2.041425798303206 0.0 0.8447509754583569 0.17941103111736922 4.400500254080348 0.09440272482773997 0.1029823768373476 1.7418784442900102e-09 8.758982155192902 0.9373315651167295 ENTQTTIK ddPTM_A549_MK2206_60min_R1 2 ENTQTTIK 8 0 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 142.92 0.0027299 10936300.0 6808.0 8216.1 7958.1 6700.5 9092.9 6836.4 7958.1 7129.700000000001 10205.2 10106.0 12029.3 False True 7957.0239603805285 8634.26439619952 9086.678245052875 8342.122800796877 7755.346455291792 7559.823310364956 9403.98375868509 8140.356808790516 7893.7384943556635 7823.047581078173 9042.092818209567 0.879998040316081 0.9548966782127325 1.004930874714482 0.9225876098061011 0.8576937453764643 0.8360700849188898 1.0400229181176643 0.9002735287561885 0.8729990559772544 0.8651810745985266 1.0 13.142441011839368 -11.019046642973242 1.3147830852978792 0.9998660260464461 0.9160003449140695 0.0 0.070784655005553 0.5759715922753406 1.7780672446443557 0.04263327771071702 0.00970307184482924 9.570912747319047e-12 11.019046642973242 -0.08386568113237669 ENTQTTIK ddPTM_A549_PD325901_60min_R1 1 ENTQTTIK 8 0 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 129.38 0.0029574000000000002 9073100.0 6396.7 6636.8 5898.3 6800.7 7440.4 7085.9 6523.3 7347.1 7172.7 7199.7 7453.1 False True 7046.088274998348 7196.106427851629 6298.594107359244 7220.763793489685 6917.811971986542 7028.194779722661 6771.547751186731 7200.556326811548 6871.256362736144 6745.109713291512 6536.415949093576 1.0779742797695502 1.1009254129320722 0.9636158647817827 1.1046977196258463 1.0583494113384653 1.075236771108069 1.035972588636401 1.1016061987013037 1.0512269133804133 1.0319278586037468 1.0 12.674284077907108 -10.16450740927521 0.7584935157337152 1.0017058817703288 1.0633209690983647 0.16511212004474396 0.03894494488418743 0.6021803667119998 0.6732504600582967 0.019378851208257258 0.007314144251311645 6.846878018843882e-11 10.16450740927521 0.06161508732803589 ENVATTDTLESTTVGT(ph)SV ddPTM_A549_MK2206_60min_R1 1 ENVATTDTLESTTVGTSV 18 0 Q15046;Q15046-2 Q15046 KARS Lysine--tRNA ligase 1 ENVATTDTLES(0.023)T(0.023)T(0.057)VGT(0.484)S(0.412)V 53.251999999999995 0.014186 1042900.0 312.47 243.04 290.53 0.0 233.55 280.91 300.17 360.45 388.48 216.51 639.52 True False 365.2072968419656 255.40969789222763 331.73152266686907 0.0 199.19510438181425 310.6357097470334 354.70700353658566 411.54489133182864 300.4899002750841 167.60024062727447 480.7095341459089 0.7597255117705132 0.53131814484608 0.6900872545751905 0.0 0.41437726991566787 0.6462025145786826 0.7378821894323446 0.8561196774743252 0.6250966101784804 0.3486517922409317 1.0 8.909021607206467 -7.621347871326836 2.4259142573993535 0.8183191576959918 0.4702339789567968 0.11377589748325001 0.24472017874682553 0.25592082196133287 3.062670326864642 0.035443696755051 0.055484658128678296 2.3913994700896106e-08 7.621347871326836 -0.34808517873919503 ENVATTDTLESTTVGT(ph)SV ddPTM_A549_PD325901_60min_R1 1 ENVATTDTLESTTVGTSV 18 0 Q15046;Q15046-2 Q15046 KARS Lysine--tRNA ligase 1 ENVATTDTLES(0.042)T(0.042)T(0.042)VGT(0.436)S(0.436)V 73.848 0.00058981 723720.0 218.87 370.97 152.66 259.07 348.71 303.72 267.0 363.69 370.79 287.36 267.13 True False 241.089521276422 402.2329438193284 163.02042561915502 275.07216550934066 324.2178125841925 301.246605018045 277.1608311080063 356.4359176407144 355.2069857569583 269.2160405588357 234.27470347658914 1.0290890040567862 1.7169286220418722 0.6958515930229126 1.174143692969516 1.3839215577818083 1.2858691124035433 1.1830591480641985 1.5214443230586896 1.516198635557995 1.1491468629080486 1.0 7.872057373002047 -6.560566800355112 22.373487507088193 1.2770907935457483 1.1593776222179075 0.05698027331444988 0.2650997423546669 172.33774256063106 102307.18693852126 0.040789582120958276 0.08491075934521544 2.750636487420054e-07 6.560566800355112 -0.11771317132784076 ENVATTDTLESTTVGTS(ph)V ddPTM_A549_MK2206_60min_R1 2 ENVATTDTLESTTVGTSV 18 0 Q15046;Q15046-2 Q15046 KARS Lysine--tRNA ligase 1 ENVATTDTLESTTVGT(0.298)S(0.701)V;ENVATTDTLESTTVGT(0.099)S(0.901)V 105.31 5.3398e-09 1730900.0 733.5699999999999 923.8299999999999 860.79 913.57 1207.13 1319.56 944.67 821.0899999999999 1610.16 820.4 1506.4 True False 857.3786819354202 970.8490010030304 982.8629656022238 1137.3946910117154 1029.562776075442 1459.1949633469633 1116.3043109934583 937.4820219826645 1245.4613308971611 635.0710702074549 1132.319305475039 0.7571880809501224 0.8573986121306415 0.8680086622650011 1.0044822917989082 0.909251278413479 1.2886779871114102 0.9858564678671958 0.8279307942995505 1.0999206009074056 0.5608586439679443 1.0 10.14506512928761 -6.063599658309652 1.1395663780058625 1.0381461886857255 0.77043654568565 0.0 0.1810042385507301 0.47464483144009967 0.9917246048755765 0.016477063884482786 0.10689608201281363 8.637744261216734e-07 6.063599658309652 -0.2677096430000755 ENVATTDTLESTTVGTS(ph)V ddPTM_A549_PD325901_60min_R1 1 ENVATTDTLESTTVGTSV 18 0 Q15046;Q15046-2 Q15046 KARS Lysine--tRNA ligase 1 ENVATTDTLESTTVGT(0.101)S(0.899)V 126.88 1.3153e-11 669350.0 338.34 146.74 203.48 377.34 398.04 160.48 193.58 270.02 266.47 321.12 202.16 True False 372.68802772725627 159.10629478407483 217.2893764246407 400.64743479868224 370.083043563454 159.17310408697446 200.9467928310405 264.63423927340796 255.27119257438642 300.8444283973178 177.2956015978261 2.1020714804457166 0.8974068919373898 1.2255768020547724 2.2597708639580527 2.087378593874783 0.8977837163047035 1.1333997629950476 1.492615930053917 1.439805557914734 1.6968521818141178 1.0 7.470012935646325 -7.269272042079738 24.988831678737988 1.2107065467909248 1.6721871399388855 0.19447891828767072 0.4283982508440763 713.732751920194 2277045.7785187606 0.06366674269538367 0.10291075721549162 5.3793271588464706e-08 7.269272042079738 0.46148059314796064 ENVEYIEREES(ph)DGEYDEFGR ddPTM_A549_MK2206_60min_R1 7 ENVEYIEREESDGEYDEFGR 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(0.991)DGEY(0.009)DEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR 327.33 7.254199999999997e-185 2539056200.0 41438.4 45025.979999999996 40454.770000000004 38992.97 58106.95 49134.69 41956.16 43730.89 64851.47 60295.31 59559.1 True False 48432.18884838903 47317.61006048996 46191.864699817495 48546.24940046092 49559.49462881122 54334.09028283243 49579.05118266834 49929.87757773386 50162.715591517204 46674.55759408853 44768.93172246308 1.081825877566962 1.056929621502406 1.0317839386067023 1.0843736388756078 1.1070064154321655 1.2136561716430232 1.1074432485908918 1.1152796293479847 1.1204805131936566 1.0425658106706464 1.0 15.450210272571056 -4.289854191739428 12.82062281345087 1.0776473165586253 1.089051732346854 0.0 0.0550654408592197 0.0 0.0 0.008684219027236225 0.0 5.130335988914058e-05 4.289854191739428 0.011404415788228706 ENVEYIEREES(ph)DGEYDEFGR ddPTM_A549_PD325901_60min_R1 6 ENVEYIEREESDGEYDEFGR 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(0.992)DGEY(0.008)DEFGR 299.97 5.069699999999999e-145 3446052500.0 33555.42 35694.53 32373.75 36719.57000000001 38628.57 34535.87 35288.76 36002.170000000006 40470.64 39157.48 37873.98 True False 36961.94153620541 38702.63331306393 34570.82735417344 38987.65444270591 35915.432504532044 34254.621325051216 36631.693072550406 35284.078476193994 38769.79974124166 36685.07003014268 33215.72056294041 1.1127845763925637 1.165190236945978 1.040797151718122 1.173771147575386 1.081278138659553 1.0312773814478056 1.102842041410394 1.0622704514067143 1.1672123646324888 1.1044490201748958 1.0 15.019578591310799 -11.031761092966384 1.3202704244632948 0.9999088019679542 1.1094287533286191 0.0 0.05587295856619152 0.3540927503516427 1.098334169875603 0.034521492741527285 0.00772962175543092 9.294775552803929e-12 11.031761092966384 0.10951995136066495 ENVEYIEREES(ph)DGEYDEFGRK ddPTM_A549_MK2206_60min_R1 2 ENVEYIEREESDGEYDEFGRK 21 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK 307.43 4.0038999999999985e-164 513260000.0 14919.3 14822.4 13384.8 13420.3 20483.5 17396.8 14918.8 15210.1 22079.4 20506.5 17545.6 True False 17437.3130981353 15576.796848410771 15282.965905729221 16708.274102460156 17470.40428432838 19237.717828938763 17629.352847924893 17366.178253977672 17078.451153556653 15874.067407617224 13188.54328607465 1.3221561107925228 1.1810854702094205 1.1588062134099377 1.2668779060763955 1.3246651965554683 1.4586688925115208 1.3367172147464648 1.3167624260909885 1.294945983275441 1.2036255303781829 1.0 13.686997602970182 -10.533294172533534 0.7977560672804448 0.9960250330872955 1.2949688544939395 0.3107648546989781 0.09536138628265185 0.3438749825191685 0.38531612833982953 0.06150100112023479 0.01650857046698719 2.9289086555570506e-11 10.533294172533534 0.298943821406644 ENVEYIEREES(ph)DGEYDEFGRK ddPTM_A549_PD325901_60min_R1 4 ENVEYIEREESDGEYDEFGRK 21 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK 254.96 6.593999999999999e-99 890448000.0 31478.3 30188.800000000003 32621.5 32142.5 37821.4 32463.1 36608.6 35263.399999999994 35338.6 34186.4 36190.8 True False 34673.9538429003 32732.916123602838 34835.39115901522 34127.869224086055 35164.95534074672 32198.731276706494 38001.76030599456 34560.043823397864 33853.441535291815 32027.86486971248 31739.561032383277 1.092452217833861 1.0312970645752175 1.0975385300216762 1.0752470454542844 1.1079219181660571 1.0144668114298976 1.1972994921770368 1.0888633207036764 1.0666008109170693 1.009083422326952 1.0 14.953994554956852 -10.005527850594929 0.8441243623998296 1.005928285285244 1.0862988036477033 0.3309077945872556 0.044450131394579664 0.450660098529491 0.649521448981445 0.01828353449908421 0.008617853265218285 9.873523164271566e-11 10.005527850594929 0.08037051836245923 ENVEYIEREES(ph)DGEYDEFGRKK ddPTM_A549_PD325901_60min_R1 2 ENVEYIEREESDGEYDEFGRKK 22 3 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEY(0.083)IEREES(0.916)DGEYDEFGRKK;ENVEY(0.001)IEREES(0.999)DGEYDEFGRKK 65.155 0.00018117 8041700.0 1199.0900000000001 1591.79 1247.17 1192.56 1264.44 2144.8999999999996 1606.2 1450.18 1714.15 1549.29 1703.95 True False 1320.820734076598 1725.9357296874916 1331.8104560424567 1266.22172269973 1175.6300964811921 2127.432645539327 1667.3248199463646 1421.2550222557977 1642.1102366171965 1451.4675649965145 1494.3749522290054 0.8838616654451185 1.1549549375898538 0.8912157247121494 0.8473253120383457 0.7867035610625203 1.4236270772379145 1.1157339176887218 0.9510698905491274 1.0988609211950653 0.9712874020215004 1.0 10.545326463480059 ENVGFRT(ph)PTIR ddPTM_A549_MK2206_60min_R1 1 ENVGFRTPTIR 11 1 E7EWZ1;P10243-2;P10243 E7EWZ1 MYBL1 Myb-related protein A 1 ENVGFRT(0.99)PT(0.01)IR 46.3 0.014158 2234500.0 483.74 399.31 504.11 420.39 527.2 570.32 462.29 573.65 703.45 525.9 893.19 True False 565.3834856924906 419.6331734090909 575.6003782452602 523.3855688720241 449.64957837761705 630.6708838522237 546.2821090213149 654.9666442294455 544.1196981788196 407.09882474658724 671.386272210071 0.8421135627801264 0.6250249532623617 0.8573311699545144 0.7795595330675175 0.6697330538163365 0.9393562394062359 0.8136629115502498 0.975543694203673 0.810442096749588 0.6063555982556783 1.0 9.390999228423343 -14.999999999265162 0.1008540250038645 1.6216535198031867 0.6693983252775639 0.0 0.14499069091880984 73.63124369912529 0.5334675829385137 9.722593882771875 0.5795518032425078 1.000000001692027e-15 14.999999999265162 -0.9522551945256228 ENVGFRT(ph)PTIR ddPTM_A549_PD325901_60min_R1 1 ENVGFRTPTIR 11 1 E7EWZ1;P10243-2;P10243 E7EWZ1 MYBL1 Myb-related protein A 1 ENVGFRT(0.991)PT(0.009)IR 46.964 0.013093 2094900.0 487.56 507.11 500.76 465.54 571.42 518.99 443.14 646.57 657.7 503.56 623.75 True False 537.0567322772984 549.8459394026997 534.7445849145029 494.2953484819486 531.2854304919827 514.7635175105862 460.00393519551255 633.6736541256474 630.05915621336 471.7651356619127 547.0327042770284 0.9817634815583567 1.0051427183487858 0.9775367738227537 0.9035937789774767 0.9712132864051378 0.941010498066857 0.8409075574438731 1.1583834918300282 1.1517760296362196 0.8624075525528384 1.0 9.095483276700898 -8.269339007553741 24.99982129621638 1.080177974131903 0.9485385123274511 0.18009469162090308 0.08760394607857756 433.5536993540513 1372057.7644492483 0.011946326542056608 0.014576154352876949 5.378497764421924e-09 8.269339007553741 -0.13163946180445196 ENVPNSDSQPPPSCLT(ph)TAVPSPSKPR ddPTM_A549_MK2206_60min_R1 1 ENVPNSDSQPPPSCLTTAVPSPSKPR 26 1 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 ENVPNSDSQPPPS(0.069)CLT(0.305)T(0.305)AVPS(0.261)PS(0.06)KPR 52.92 0.0026282 4276600.0 831.86 893.72 579.76 699.01 1438.9 663.24 804.56 737.29 1060.6 1029.5 1082.8 True False 972.2576309756387 939.2065306132388 661.9786857857849 870.2674813797511 1227.2397160993035 733.423616576919 950.7381376066741 841.803115355928 820.3757934301742 796.9352349811975 813.9108762402902 1.1945504837910532 1.153942720303393 0.8133306792061463 1.069241739832486 1.507830589226561 0.9011104753444663 1.1681108649124237 1.0342694021297278 1.007943028381372 0.9791431202670389 1.0 9.668727016888347 -8.45581834148251 5.474934889029405 1.0044588608736869 1.1103176626362106 0.09373888331114932 0.16644023779541853 0.4460079860296542 25.827337201413105 0.026720552280346622 0.03216074247474544 3.5009157417839097e-09 8.45581834148251 0.10585880176252371 ENVPNSDSQPPPSCLTTAVPS(ph)PSKPR ddPTM_A549_PD325901_60min_R1 1 ENVPNSDSQPPPSCLTTAVPSPSKPR 26 1 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 ENVPNSDSQPPPS(0.012)CLT(0.054)T(0.046)AVPS(0.734)PS(0.154)KPR 69.094 5.2204e-05 5078800.0 1209.1 1333.9 1616.8 1055.8 1330.2 1250.9 1298.5 1898.8 1165.6 1508.1 1713.5 True False 1331.8469419076248 1446.3124343224572 1726.525770608214 1121.0143681042257 1236.7713409408766 1240.7130851345735 1347.9151280664648 1860.9269444202162 1116.613885483187 1412.8783086260441 1502.750362771443 0.8862729132544477 0.9624435768926382 1.1489105665055865 0.7459751106210337 0.8230051854121431 0.8256282053703131 0.8969654318236705 1.2383473599621744 0.7430468247725958 0.9401949542839221 1.0 10.553389652995449 -6.265018230870896 24.968026076303424 0.8883670191455014 0.9955324681713454 0.07943319130993798 0.1426589565374319 594.0531227495844 4144455.068372042 0.02147219005776913 0.051776836313526545 5.432275273371903e-07 6.265018230870896 0.10716544902584402 ENVSDLTLGPGNS(ph)PITR ddPTM_A549_MK2206_60min_R1 2 ENVSDLTLGPGNSPITR 17 0 Q6DCA0 Q6DCA0 AMMECR1L AMMECR1-like protein 1 ENVSDLTLGPGNS(1)PITR;ENVSDLTLGPGNS(0.999)PIT(0.001)R 165.17 8.363699999999999e-23 13928100.0 2452.7 3178.5 2357.4 2528.4 3566.2000000000003 2510.1 2216.0 3181.7 3904.1000000000004 4250.0 4039.9 True False 2866.65579724226 3340.272073528824 2691.714767958136 3147.8581135041886 3041.6167041165754 2775.7171159304708 2618.6185156313886 3632.7157185475935 3019.8275835666086 3289.9220482468077 3036.681334432163 0.9440094239517245 1.0999745135106282 0.8864001426285536 1.036611276201892 1.0016252511017378 0.9140626922085353 0.8623290451782128 1.1962782124542166 0.9944499441958383 1.0833939047022194 1.0 11.568279806484647 ENVSDLTLGPGNS(ph)PITR ddPTM_A549_PD325901_60min_R1 2 ENVSDLTLGPGNSPITR 17 0 Q6DCA0 Q6DCA0 AMMECR1L AMMECR1-like protein 1 ENVSDLTLGPGNS(1)PITR;ENVSDLT(0.004)LGPGNS(0.823)PIT(0.173)R 208.63 7.1746e-55 27866000.0 5757.4 5359.9 5260.0 6617.9 6170.2 6117.0 5448.200000000001 6610.0 5222.9 6860.6 7736.7 True False 6341.887009626134 5811.597583570687 5616.975230949527 7026.672652658609 5736.826438034426 6067.185180084884 5655.534232369435 6478.1583645553155 5003.399676124001 6427.420545162678 6785.134946982097 0.9346736740213087 0.856519086058204 0.8278354483499041 1.0355980695393454 0.8454992395672338 0.8941878426137209 0.8335183126880789 0.9547574831119138 0.7374060671187419 0.9472796923547521 1.0 12.728161793807441 -5.240686462943669 21.140034679741937 0.8813820678479913 0.9346740743143443 0.001959191547332151 0.082866947986811 2186.1455154314863 2226619.545650346 0.013619877737978982 0.5879802480409129 5.745310928007649e-06 5.240686462943669 0.053292006466353015 ENYSDS(ph)EEEDDDDVASSR ddPTM_A549_MK2206_60min_R1 2 ENYSDSEEEDDDDVASSR 18 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 ENYS(0.006)DS(0.994)EEEDDDDVASSR;ENY(0.015)S(0.018)DS(0.967)EEEDDDDVASSR 100.77 7.901e-09 32417000.0 0.0 912.3199999999999 739.99 503.76 633.46 655.03 700.26 305.71 878.81 848.14 781.29 True False 0.0 958.7531911662162 844.9317091462375 627.1812226146455 540.2788731393878 724.3448398262759 827.4881776877413 349.0453286976098 679.7609381711965 656.5445849411877 587.2741304929592 0.0 1.6325479727183567 1.4387347667383201 1.0679530904727375 0.9199773071663764 1.233401578949611 1.4090322299624298 0.5943482107829616 1.1574848999403458 1.1179525043782923 1.0 9.197890278092746 -11.162878603676385 1.5117094765159855 0.9993907204511766 1.0896564579889396 0.0 0.4283993632651528 3.257168790889364 13.201459236954106 0.2963800638076834 0.06093759445069094 6.872605199151282e-12 11.162878603676385 0.09026573753776301 ENYSDS(ph)EEEDDDDVASSR ddPTM_A549_PD325901_60min_R1 2 ENYSDSEEEDDDDVASSR 18 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 ENYS(0.009)DS(0.991)EEEDDDDVASSR;ENYS(0.006)DS(0.994)EEEDDDDVASSR 113.88 6.1559e-10 42339000.0 972.04 660.96 769.0699999999999 989.3 1280.02 871.0999999999999 698.48 923.29 856.45 1214.59 1140.24 True False 1070.7207852219724 716.661418839322 821.2637149936035 1050.4068141366831 1190.1158110292733 864.0060504122839 725.0610386229214 904.8742566430074 820.4563848851019 1137.9005801167732 999.9977085768953 1.0707232387019403 0.7166630610176182 0.8212655968605672 1.0504092210686415 1.1901185380943888 0.864008030220247 0.7250627000483446 0.904876330097537 0.8204582649021265 1.137903187534428 1.0 9.96578097883355 EPADVPYQT(ph)GQLHPAIR ddPTM_A549_MK2206_60min_R1 2 EPADVPYQTGQLHPAIR 17 0 E7EPS8;P28827;P28827-2 E7EPS8 PTPRM Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase mu 1 EPADVPYQT(1)GQLHPAIR;EPADVPYQT(1)GQLHPAIR 125.28 2.2165e-10 31456000.0 1493.65 1663.93 1555.76 1337.78 2203.25 1822.6 1613.56 1693.22 2719.0 2252.8999999999996 2415.29 True False 1745.7416037635683 1748.6169297803415 1776.3901617877955 1665.5361600552267 1879.154843627626 2015.466322256035 1906.722965741057 1933.2391202687738 2103.150841350786 1743.9683252929963 1815.5068343871546 0.9615725871684 0.9631563465695283 0.9784541309024797 0.9173945966540235 1.0350579838284975 1.1101397604688055 1.0502427915038355 1.0648481645189516 1.1584373033003363 0.9605958469893026 1.0 10.826156645765725 -6.942736913497475 5.245172133969775 1.0758348961748117 0.9580523553937891 0.43674777116838637 0.05220942056909464 0.1341078475950313 7.667683063607945 0.008386576025025622 0.015993619340104674 1.1409407362643657e-07 6.942736913497475 -0.11778254078102257 EPADVPYQT(ph)GQLHPAIR ddPTM_A549_PD325901_60min_R1 2 EPADVPYQTGQLHPAIR 17 0 E7EPS8;P28827;P28827-2 E7EPS8 PTPRM Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase mu 1 EPADVPYQT(1)GQLHPAIR;EPADVPYQT(1)GQLHPAIR 93.006 3.9404e-06 48411000.0 6256.4 5778.700000000001 6147.7 6375.299999999999 7473.4 6599.4 6291.4 6583.2 7498.6 7741.700000000001 7943.2 True False 6891.545122281748 6265.691329349414 6564.919891123271 6769.087801643176 6948.494165830363 6545.656674424098 6530.82266978618 6451.892911579506 7183.459919083922 7252.887740793211 6966.236756093449 0.9892780512022697 0.8994370344747099 0.9423911533556275 0.9716993605941078 0.9974530595378392 0.9396259276859253 0.9374965133181259 0.9261661837628415 1.0311822825717867 1.0411486136254307 1.0 12.766163790178966 -8.765390984837339 24.999613441815978 1.0147249690485118 0.9499581622509703 0.5653575718924264 0.02844153664181259 57.71602440354679 365136.3564366434 0.004895429724043694 0.005306488318132348 1.7163624916809009e-09 8.765390984837339 -0.06476680679754154 EPAFEDITLES(ph)ER ddPTM_A549_MK2206_60min_R1 1 EPAFEDITLESER 13 0 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 EPAFEDIT(0.016)LES(0.984)ER 75.589 0.0010582 2191300.0 907.28 835.58 775.41 681.81 943.28 835.0 752.18 901.16 1074.0 875.83 1031.3 True False 1060.4066831336722 878.1074529492573 885.3747977527864 848.8534806076142 804.5247615554601 923.3591457718593 888.8413696243764 1028.9021896867555 830.740714825577 677.9793947096476 775.1997475679822 1.367914123373316 1.1327499211708019 1.1421247240217172 1.095012586460076 1.037828977730551 1.191124156926901 1.14659656741752 1.3272736387166129 1.071647297914947 0.8745867072798438 1.0 9.598424290736078 -14.999999999999872 0.0912201092465448 0.42165556822765315 1.2943341042534509 0.41298827766158364 0.10195218909094499 111.31424407424409 0.7397142837763847 12.183264307452138 0.9317937801314765 1.0000000000002945e-15 14.999999999999872 0.8726785360257977 EPAFEDITLES(ph)ER ddPTM_A549_PD325901_60min_R1 2 EPAFEDITLESER 13 0 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 EPAFEDIT(0.001)LES(0.999)ER;EPAFEDIT(0.018)LES(0.982)ER 102.52 0.00013201 5519500.0 3421.7 3792.3 3820.7 3494.4 4422.9 3327.9 3434.5 4004.5 4049.2999999999997 3527.6 4497.6 True False 3769.0684650775956 4111.890430078009 4079.995677735524 3710.2411516417956 4112.250762176667 3300.798685761727 3565.2017769305153 3924.6271060305207 3879.122002820065 3304.866733976016 3944.42371263545 0.9555435063945775 1.0424565740506275 1.0343705379991979 0.9406294612205375 1.0425479263304307 0.8368266003441888 0.9038587222538627 0.9949811156084694 0.9834445499335683 0.837857941931873 1.0 11.945598819969256 -4.908586516183491 14.452995810865618 0.9824277651665169 0.39248368890479735 0.0 0.07410292172413935 1960341.2333788325 4826771.704339985 0.008062381348047492 36161813.0196552 1.2342794087975991e-05 4.908586516183491 -0.5899440762617195 EPAFEDITLES(ph)ERKR ddPTM_A549_PD325901_60min_R1 2 EPAFEDITLESERKR 15 2 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 EPAFEDIT(0.005)LES(0.995)ERKR;EPAFEDIT(0.064)LES(0.936)ERKR 111.33 4.7428999999999994e-07 8077700.0 526.06 694.9 786.56 591.49 744.23 478.89500000000004 502.85 745.98 775.02 676.55 603.1600000000001 True False 579.4652239350964 753.4616617517621 839.9406915695173 628.0249939287444 691.9578522541183 474.99503789713106 521.9862319200781 731.1008436900113 742.4486046046494 633.8325175392546 528.9751437462644 1.0954488708699153 1.4243800879104787 1.5878641964553537 1.1872485907012515 1.3081103345491645 0.8979534171174096 0.9867878256496326 1.3821081242348532 1.4035604761058162 1.198227412067754 1.0 9.047056122252954 -11.01028952694193 1.3071877472423343 1.0006863952604772 1.2690482674466785 0.045579815726201955 0.20154239167593554 0.6166229528072235 1.883992211314193 0.14505922621166267 0.03328217510141635 9.765859526906597e-12 11.01028952694193 0.26836187218620133 EPAITSQNS(ph)PEAR ddPTM_A549_MK2206_60min_R1 4 EPAITSQNSPEAR 13 0 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR 197.06 2.2736e-30 236929000.0 12924.3 13455.400000000001 13100.400000000001 11427.9 16496.0 12791.099999999999 12398.2 13397.0 18155.1 19102.0 19252.9 True False 15105.605871202413 14140.222387339853 14958.23370923846 14227.736013017919 14069.460252119072 14144.645711955003 14650.792455099758 15296.065776591786 14042.998837737267 14786.84493308484 14471.87357699176 1.0437906184599484 0.9770830509341109 1.0336072678951498 0.983130203378643 0.9721934189977676 0.9773887006892457 1.0123632145593404 1.0569513128493864 0.9703649470835384 1.0217643800173766 1.0 13.820964089619327 -3.8171520834578776 2.1419625766234143 0.9927522651499932 18.50935819668399 0.1033087082264661 0.028082726175774304 669.0165886743874 10.573988442204957 0.003822302750814305 57138.22144042978 0.0001523519146662813 3.8171520834578776 17.516605931534 EPAITSQNS(ph)PEAR ddPTM_A549_PD325901_60min_R1 4 EPAITSQNSPEAR 13 0 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 EPAITS(0.001)QNS(0.999)PEAR;EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR 193.98 1.2725e-26 276898000.0 23771.1 23940.9 22830.0 22465.2 26667.8 23587.4 23613.3 25644.6 24800.3 27347.6 26219.7 True False 26184.324572641097 25958.483663595853 24379.381087942533 23852.824381829007 24794.745726915564 23395.31203477755 24511.917053193567 25133.098335200477 23758.029636366384 25620.867868829384 22994.843120372567 1.138704205789635 1.1288828337601318 1.0602108029318678 1.0373118988881598 1.0782741850910194 1.0174155967191698 1.065974528500998 1.0929884671808652 1.0331894639158317 1.1142005942249833 1.0 14.48902273468271 -2.0000000000000004 0.15774921742436776 0.9951785775876982 1.4983970234043609 0.06347457187465544 0.04222126883148549 28.694891531207652 0.27777468621757634 0.04449938458876674 3.3749345620866618 0.00999999999999999 2.0000000000000004 0.5032184458166626 EPAITSQNS(ph)PEAREESTSSGNVSNR ddPTM_A549_MK2206_60min_R1 2 EPAITSQNSPEAREESTSSGNVSNR 25 1 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 EPAIT(0.002)S(0.01)QNS(0.988)PEAREESTSSGNVSNR;EPAITSQNS(1)PEAREESTSSGNVSNR 247.36 1.1490999999999998e-112 46612000.0 3036.01 3010.25 3209.6800000000003 2416.09 3113.1000000000004 2578.56 2495.29 1748.0900000000001 4003.6 5023.6 4811.3 True False 3548.4142646819746 3163.4588671826773 3664.8608875964483 3008.0321584624035 2655.167113898633 2851.4215076904 2948.651893443073 1995.8871108010999 3096.7909924354576 3888.765270958273 3616.521424875239 0.9811677708516232 0.8747242157681421 1.0133662868381532 0.8317473630247256 0.7341770729286443 0.7884431398851085 0.8153281971901477 0.5518803502926719 0.8562899617115608 1.0752778192354897 1.0 11.820386983114696 -4.281810992735271 16.487625591167035 0.8793439577512696 0.8514515240042113 0.0 0.14294408052936267 0.0 0.0 0.01894029372912524 0.0 5.2262358807367067e-05 4.281810992735271 -0.0278924337470583 EPAITSQNS(ph)PEAREESTSSGNVSNR ddPTM_A549_PD325901_60min_R1 2 EPAITSQNSPEAREESTSSGNVSNR 25 1 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 EPAITS(0.001)QNS(0.999)PEAREESTSSGNVSNR;EPAITS(0.005)QNS(0.995)PEAREESTSSGNVSNR 223.61 1.969299999999999e-95 76402000.0 2247.24 2605.91 2539.26 2840.3999999999996 2709.2799999999997 3244.9900000000002 2381.8 3245.29 3308.3 2685.51 2947.3 True False 2475.3781504693507 2825.5191811419386 2711.5894534108197 3015.84505698356 2518.9895193085986 3218.563877313005 2472.4407023709705 3180.560145069247 3169.2636559231537 2515.946440287997 2584.8007844740437 0.9576668984851928 1.0931284136533084 1.0490516211919887 1.166761119502378 0.9745391344815626 1.2451883706650606 0.95653046734666 1.2304856003502138 1.226115248401256 0.9733618371676341 1.0 11.33583737822876 -4.125554110603715 0.9391401374019178 1.110713926947481 1.806145857840538e-10 0.09639265935873098 0.10687170128261032 22.66967849894746 2.9212097167199915 0.016178311575367987 42.10769121924607 7.489380393094605e-05 4.125554110603715 -1.1107139267668664 EPALPLEPDSGGNTS(ph)PGVTANGEAR ddPTM_A549_MK2206_60min_R1 2 EPALPLEPDSGGNTSPGVTANGEAR 25 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;Q5VY93 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 EPALPLEPDS(0.098)GGNT(0.355)S(0.453)PGVT(0.094)ANGEAR;EPALPLEPDS(0.034)GGNT(0.179)S(0.78)PGVT(0.007)ANGEAR 81.242 9.4836e-07 9550600.0 2237.49 2563.2799999999997 2237.58 2323.01 2858.6000000000004 2196.21 2342.1099999999997 1971.23 3386.4 2796.6 3171.6 True False 2615.123610621596 2693.7400033459057 2554.9024902382985 2892.147554283883 2438.103726764524 2428.6114844737886 2767.6410702371077 2250.657889138691 2619.3858069695866 2164.846117676946 2384.0041882930386 1.0969458960951073 1.1299225129611201 1.0716854034000771 1.2131470105992885 1.0226927195586097 1.0187110812975078 1.1609212281706416 0.9440662479499148 1.0987337269927713 0.9080714406072369 1.0 11.219171055036108 -14.999999997265794 0.08894875064633175 0.7337572993948028 1.1617087030247615 0.2995518149273586 0.0734606903173747 155.7388777407994 1.0123260767599775 8.158124266569693 0.662190947464432 1.0000000062957414e-15 14.999999997265794 0.42795140362995865 EPAPAS(ph)PAPAGVEIR ddPTM_A549_MK2206_60min_R1 4 EPAPASPAPAGVEIR 15 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 EPAPAS(1)PAPAGVEIR;EPAPAS(1)PAPAGVEIR;EPAPAS(1)PAPAGVEIR;EPAPAS(1)PAPAGVEIR 118.19 7.8197e-07 16357400.0 5600.83 5787.639999999999 4681.51 4566.37 5906.76 4525.52 4241.41 4368.0599999999995 5786.84 6903.35 7199.129999999999 True False 6546.113176853414 6082.206154990835 5345.418513338291 5685.130854992138 5037.8834286376605 5004.407522602952 5012.019295299696 4987.2458816227145 4476.1299796845815 5343.878440415204 5411.387335119833 1.2096922233544853 1.1239642957208769 0.9878092589393103 1.0505865691956133 0.9309781608021039 0.9247919641834568 0.9261985854850486 0.921620570247403 0.827168654262569 0.9875246604015024 1.0 12.401782794593984 -5.2965208158090755 0.6655776822910786 0.9169368550981499 1.3938669060713667 0.7502822351879799 0.050646115316192286 1.264932534511711 0.39232948669279394 0.010867073209391283 0.451247184484093 5.052184291537842e-06 5.2965208158090755 0.4769300509732167 EPAPAS(ph)PAPAGVEIR ddPTM_A549_PD325901_60min_R1 2 EPAPASPAPAGVEIR 15 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 EPAPAS(1)PAPAGVEIR;EPAPAS(1)PAPAGVEIR 121.95 4.5365000000000004e-07 12187500.0 6682.6 7005.6 8436.5 7376.4 7375.9 6363.6 6638.4 7145.799999999999 7234.6 8743.1 8663.7 True False 7361.012632529892 7595.986498155335 9009.051622795763 7832.023474980118 6857.8422294736165 6311.7769514448555 6891.027944671861 7003.271413228344 6930.554920999191 8191.059173893224 7598.119823719261 0.9687939652584596 0.9997192298077129 1.1856948602826658 1.0307844120239686 0.9025709502586812 0.830702476123265 0.9069385722451953 0.9217111042874103 0.9121407771648831 1.0780376414074135 1.0 12.891426748405278 -6.653127289907293 5.896090502764392 0.9379129367452912 1.0556741268207426 0.3203172967497133 0.07736755554494376 0.178839200042978 8.696654489768283 0.010396365435402236 0.02181722294284568 2.2226583432522846e-07 6.653127289907293 0.11776119007545138 EPAPPS(ph)PESHSPR ddPTM_A549_MK2206_60min_R1 2 EPAPPSPESHSPR 13 0 K7EM05;Q8NC06-2;Q8NC06 K7EM05 ACBD4 Acyl-CoA-binding domain-containing protein 4 1 EPAPPS(0.999)PESHSPR;EPAPPS(0.999)PESHSPR 78.285 0.00026149 35669000.0 695.63 494.15999999999997 617.0 430.28 589.74 665.24 487.71000000000004 590.44 769.06 980.6299999999999 1096.8899999999999 True False 813.0353374793635 519.3106332719846 704.4998777594677 535.6986193160034 502.99002722385427 735.635255249427 576.3205939795054 674.136678146664 594.8691379364601 759.1050019228861 824.5019403760725 0.9860926914356577 0.6298476787515093 0.8544550876837606 0.6497239037080496 0.6100531758535706 0.8922177368241103 0.6989924046954135 0.8176289771242701 0.7214890697105308 0.9206830993953059 1.0 9.687379078668084 -10.794807884606247 0.7732595613846536 1.020564040732071 0.753593882436728 0.29826485544889025 0.11433696460795804 0.6103091783930126 0.5638384963921773 0.10425713267015563 0.019351127301615915 1.6039547624825694e-11 10.794807884606247 -0.2669701582953431 EPAPPS(ph)PESHSPR ddPTM_A549_PD325901_60min_R1 3 EPAPPSPESHSPR 13 0 K7EM05;Q8NC06-2;Q8NC06 K7EM05 ACBD4 Acyl-CoA-binding domain-containing protein 4 1 EPAPPS(0.996)PES(0.004)HS(0.001)PR;EPAPPS(1)PESHSPR;EPAPPS(0.969)PES(0.003)HS(0.029)PR 92.575 5.4807e-05 45272100.0 2715.0699999999997 2447.71 2532.08 2359.19 3405.5999999999995 2845.85 2850.6800000000003 2606.02 3029.6800000000003 2962.58 3021.01 True False 2990.7019076711053 2653.9871119389923 2703.9221754339696 2504.9118081907627 3166.4024046821883 2822.6743411385596 2959.164187351951 2554.0408867168603 2902.3530855960016 2775.5221932029353 2649.4449217602337 1.1288032006659523 1.0017143931324832 1.0205617611546884 0.9454477757275112 1.1951191657830347 1.0653832876296352 1.1168996807776426 0.9639909347577647 1.095457037720845 1.0475862964378737 1.0 11.3714744207509 -5.238302331957176 22.54216979220092 1.0461403192893401 1.1288035533447258 0.10937597094754259 0.06852370027038875 2846.84671717157 2773485.8371174796 0.0092153024049536 0.5876435030242877 5.776937487447823e-06 5.238302331957176 0.08266323405538567 EPCLHPLEPDEVEYEPRGS(ph)R ddPTM_A549_MK2206_60min_R1 2 EPCLHPLEPDEVEYEPRGSR 20 1 Q9UIQ6-3;Q9UIQ6-2;Q9UIQ6 Q9UIQ6-3 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form 1 EPCLHPLEPDEVEYEPRGS(1)R;EPCLHPLEPDEVEYEPRGS(1)R 141.1 3.6949e-21 10697700.0 496.13 532.4000000000001 481.03 408.17 614.0 408.48 560.39 544.1 598.8 718.87 637.78 True False 579.8646147860737 559.4968859357389 549.2472871939009 508.17166832344736 523.6814133608814 451.70508247292076 662.2056091943475 621.2278412363657 463.17275608710946 556.4767677231017 479.4016241674662 1.2095591369617753 1.167073405116987 1.145693421768709 1.0600124044342643 1.0923647041670164 0.9422268505188243 1.3813169914564654 1.2958400846371692 0.9661476572830976 1.1607736387824823 1.0 8.905090986484716 -8.792420844033106 24.997722348612538 0.9840141237136146 1.155698327347975 0.111667876450801 0.1221882748768158 169.4646898238486 136733.62471321574 0.01966959588631347 0.020940954986905683 1.6127949539610918e-09 8.792420844033106 0.17168420363436043 EPCLHPLEPDEVEYEPRGS(ph)R ddPTM_A549_PD325901_60min_R1 2 EPCLHPLEPDEVEYEPRGSR 20 1 Q9UIQ6-3;Q9UIQ6-2;Q9UIQ6 Q9UIQ6-3 LNPEP Leucyl-cystinyl aminopeptidase;Leucyl-cystinyl aminopeptidase, pregnancy serum form 1 EPCLHPLEPDEVEYEPRGS(1)R;EPCLHPLEPDEVEYEPRGS(1)R 103.02 6.5587e-10 12922300.0 1133.99 1265.35 1275.3 1089.55 1278.69 1022.77 1126.1599999999999 1140.85 1379.5700000000002 1254.78 1475.96 True False 1249.111830000684 1371.9854852462115 1361.8495270018886 1156.8490289524138 1188.8792256410227 1014.4409002183133 1169.016635058397 1118.0948517704878 1321.5914704839047 1175.5529766579057 1294.4262768813182 0.9649926398359194 1.0599178259512454 1.0520873620419806 0.8937156558190619 0.9184603610685409 0.7836992483360442 0.9031156551263215 0.8637763862955035 1.0209862810171282 0.90816526028055 1.0 10.338097084580303 -8.792409498317008 24.980334301162294 1.0099102081669649 0.9310096938330354 0.018105068961880577 0.08065187913877939 263.6580513791048 212664.0186020345 0.014193234448838216 0.01511059366278169 1.612837087935742e-09 8.792409498317008 -0.07890051433392942 EPDPDS(ph)DWEPEER ddPTM_A549_MK2206_60min_R1 3 EPDPDSDWEPEER 13 0 Q9NPE2;Q9NPE2-3 Q9NPE2 NGRN Neugrin 1 EPDPDS(1)DWEPEER;EPDPDS(1)DWEPEER;EPDPDS(1)DWEPEER 139.89 2.8489000000000004e-09 8295800.0 1728.5100000000002 1327.95 890.23 863.6 2514.54 1642.73 1534.2199999999998 1759.1100000000001 2358.35 2173.9300000000003 1906.69 True False 2020.2402299878588 1395.5369828669504 1016.4780002881862 1075.182038768477 2144.6544969909964 1816.5625982440793 1812.9679147346508 2008.4692295484344 1824.1874905110808 1682.837703140044 1433.2062510330613 1.409594905500629 0.9737167849086907 0.709233579992764 0.750193517502091 1.4964032535059906 1.2674816321340303 1.26497349102954 1.4013818514262837 1.2728017961100844 1.1741769211005375 1.0 10.485030525756203 -6.745461314494565 24.999895454542 1.1949036861550426 0.9436548423610845 0.288262196673421 0.21289829512011435 307.63557594135807 481335.8243313165 0.033338895308219214 0.06922545721570235 1.7969611403557148e-07 6.745461314494565 -0.25124884379395807 EPDPDS(ph)DWEPEER ddPTM_A549_PD325901_60min_R1 4 EPDPDSDWEPEER 13 0 Q9NPE2;Q9NPE2-3 Q9NPE2 NGRN Neugrin 1 EPDPDS(1)DWEPEER;EPDPDS(1)DWEPEER;EPDPDS(1)DWEPEER;EPDPDS(1)DWEPEER 134.61 2.5162e-08 11811700.0 2056.38 1743.14 1902.9700000000003 1426.58 1846.87 1685.37 1248.76 1453.26 2805.99 1747.06 2605.9300000000003 True False 2265.142183773055 1890.0405253503625 2032.1169876882193 1514.696606601748 1717.1522225556116 1671.644905502642 1296.282245147692 1424.2735892395842 2688.063998393074 1636.7503334448745 2285.41713035132 0.9911285575359504 0.8270002443973197 0.8891667786597177 0.6627659285851705 0.7513517772099865 0.7314397373251825 0.5671972209941493 0.623200714794958 1.1761809092504083 0.7161713770795396 1.0 11.158241792162897 -8.765206041864733 24.999792600711313 1.0831965506810752 0.7519558135545851 0.15259381174337894 0.16265614389169153 50.52547312433131 335342.8204407728 0.022875800197979794 0.02481015508652177 1.717093555031293e-09 8.765206041864733 -0.33124073712649016 EPDPPDDRDAS(ph)DGEDEKPPLPPR ddPTM_A549_MK2206_60min_R1 2 EPDPPDDRDASDGEDEKPPLPPR 23 2 O15357 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 EPDPPDDRDAS(1)DGEDEKPPLPPR;EPDPPDDRDAS(1)DGEDEKPPLPPR 79.017 1.5250999999999998e-05 7014800.0 2203.1 2796.3 2192.8 2364.3 4213.4 2534.3 2836.0 2303.9 3964.8 3473.4 3790.1 True False 2574.9294193763726 2938.619726037015 2503.772012886485 2943.553606137462 3593.614441457228 2802.477943867811 3351.2644902213974 2630.484880397839 3066.7791304845873 2688.7565276189316 2848.9135685614365 0.9038285498694815 1.0314878480223166 0.8788515174754032 1.0332196942091907 1.261398197935443 0.9837005849506789 1.1763306992544613 0.9233291277861078 1.0764732087092281 0.9437831169362655 1.0 11.476196137949234 -6.494128137406406 22.985086187743622 1.0516439017825017 0.9488384744942158 0.19925126185324415 0.09968001538583245 318.0379558929505 254258.64326406954 0.012553684194491925 0.02910024433081828 3.2053234630002e-07 6.494128137406406 -0.1028054272882859 EPEAASSRGS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 EPEAASSRGSPVR 13 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EPEAAS(0.006)S(0.036)RGS(0.958)PVR;EPEAAS(0.002)S(0.011)RGS(0.987)PVR 109.22 1.8233e-05 479090000.0 4056.4 4656.200000000001 4350.5 3655.9 5312.200000000001 4223.5 3340.6 3518.8 6083.4 6767.0 6899.6 True False 4741.021150541651 4893.180691761811 4967.466317978227 4551.595664119585 4530.782417028788 4670.427966667601 3947.543778573202 4017.600675873045 4705.519613193589 5238.330000114391 5186.238900727283 0.9141540220749959 0.9434931142635224 0.9578167170975528 0.8776293863904534 0.873616218565138 0.9005423884373417 0.7611573346572262 0.7746655626121742 0.9073086881002953 1.010044099468654 1.0 12.340472949194233 -9.949732434515898 1.1035196435199897 0.9862002360471147 0.8789918121262646 0.39108337785070135 0.059401597447011824 0.3870690588045183 0.9529841739416316 0.02151655742600395 0.012411746818427952 1.1227099342124616e-10 9.949732434515898 -0.10720842392085006 EPEAASSRGS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 EPEAASSRGSPVR 13 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EPEAASS(0.001)RGS(0.999)PVR;EPEAAS(0.002)S(0.017)RGS(0.981)PVR 150.11 2.3115e-13 672450000.0 6697.1 6462.2 6365.1 7399.0 7827.7 9125.9 8785.5 8602.900000000001 8579.8 8495.6 8966.5 True False 7376.984661855554 7006.792273092874 6797.073962455673 7856.0194256518 7277.909356099005 9051.581696082505 9119.83701011007 8431.308410655505 8219.220843058203 7959.186366131837 7863.677343326611 0.938108767664014 0.8910325242475876 0.8643632826852827 0.9990261658330488 0.9255096614912985 1.1510621940464014 1.1597420153370712 1.0721839214080426 1.0452133886232398 1.01214559278507 1.0 12.940988411944293 -6.80205524618543 1.9540658230405519 1.0442900769038361 0.9052042235915342 0.5459548305937928 0.06264702652100151 0.23410666902758767 1.8179909314684457 0.010268307353546826 0.023444618333518175 1.5774105960435032e-07 6.80205524618543 -0.13908585331230194 EPEKEIRPALELLEPIEQK ddPTM_A549_PD325901_60min_R1 1 EPEKEIRPALELLEPIEQK 19 2 P50395-2;P50395 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 59.872 0.0010138999999999999 644330.0 366.75 325.95 484.34 416.47 345.53 477.22 594.06 312.78 366.65 373.08 410.9 False True 403.9821900129196 353.4189504216245 517.2102249730217 442.19440602800404 321.2611648137882 473.333678541787 616.6672783821055 306.5413575288366 351.24097555972077 349.523665129769 360.3619049097088 1.1210457723441665 0.9807333838746803 1.4352522226305033 1.227084217292055 0.8914959112958469 1.3134953281490285 1.7112443629040526 0.8506486211566749 0.9746895295376092 0.9699240135200877 1.0 8.493302696756569 EPEMPGPREES(ph)EEEEDEDDEEEEEEEKEK ddPTM_A549_MK2206_60min_R1 4 EPEMPGPREESEEEEDEDDEEEEEEEKEK 29 2 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;H0Y8X0;D6R9L5 A0A494C198 DEK Protein DEK 1 EPEMPGPREES(1)EEEEDEDDEEEEEEEKEK;EPEMPGPREES(1)EEEEDEDDEEEEEEEKEK;EPEMPGPREES(1)EEEEDEDDEEEEEEEKEK;EPEMPGPREES(1)EEEEDEDDEEEEEEEKEK 150.16 2.0922e-36 98505000.0 5197.799999999999 6187.900000000001 5202.3 4906.43 7323.099999999999 5993.8 5104.4 5692.6 7559.6 7599.5 7377.900000000001 True False 6075.061565990877 6502.837679342144 5940.064366398831 6108.505570258012 6245.8816908519075 6628.059937637565 6031.803407576198 6499.54348285634 5847.362670200586 5882.767671918029 5545.763810318839 1.0954418135671753 1.172577466649861 1.0710994138167818 1.1014723632643886 1.1262437248464097 1.1951572703664244 1.0876415970606248 1.1719834643449532 1.0543836467251941 1.0607677991933477 1.0 12.437170459110567 -9.03971626115516 2.332055242070901 1.01998287475571 1.127230930791019 0.4719059131998886 0.040815858178123436 0.13348642399682709 1.4778515742391964 0.007418762520329198 0.0073356248001277885 9.126068806680973e-10 9.03971626115516 0.10724805603530907 EPEMPGPREES(ph)EEEEDEDDEEEEEEEKEK ddPTM_A549_PD325901_60min_R1 2 EPEMPGPREESEEEEDEDDEEEEEEEKEK 29 2 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;H0Y8X0;D6R9L5 A0A494C198 DEK Protein DEK 1 EPEMPGPREES(1)EEEEDEDDEEEEEEEKEK;EPEMPGPREES(1)EEEEDEDDEEEEEEEKEK 165.55 8.3163e-47 122716000.0 5642.7 6473.799999999999 5472.3 5924.299999999999 7079.1 5666.1 6220.6 6286.700000000001 6464.3 5848.8 7192.6 True False 6215.542750063809 7019.369845803078 5843.683185613141 6290.230555938492 6581.888437569205 5619.957160189469 6457.328337042931 6161.306836679261 6192.627951208789 5479.505769837545 6307.955797648023 0.9853497629741365 1.1127804428211612 0.9263988799338148 0.9971900180853931 1.0434265313056443 0.8909316013731294 1.0236800231622745 0.9767517456251927 0.9817170807566162 0.8686658476396787 1.0 12.622956835288699 -5.763553089139938 24.99990830137319 0.9863003988953709 1.0490650867137112 0.16264951994534194 0.060090591415161626 53.78206337068643 636146.6397847871 0.005838670545376932 0.019545782854604885 1.7236413763270024e-06 5.763553089139938 0.06276468781834033 EPFGTEGR ddPTM_A549_MK2206_60min_R1 2 EPFGTEGR 8 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 82.529 0.009748 11592800.0 3217.7 4313.3 2707.8 5858.2 6923.0 3648.6 3176.8 3220.7 4972.1 3856.3999999999996 4770.799999999999 False True 3760.7690947879596 4532.828546406128 3091.806756883448 7293.459262984592 5904.635870842648 4034.692430255333 3753.9834388347417 3677.2440879800833 3845.927288812153 2985.236561613879 3586.078692618372 1.0487134882257807 1.264006993414996 0.862169244430598 2.033825771307679 1.6465438650291815 1.1250986874773252 1.04682126651654 1.0254220286769968 1.072460372029386 0.8324514929799858 1.0 11.808191431598054 -7.489985073283481 13.782411382487592 1.0373495814051887 1.3748918214614554 0.27076325403199175 0.29145465770084766 3.5035062173179794 1466.6969668594227 0.04294139356946839 0.06837240588540468 3.2360477904605694e-08 7.489985073283481 0.33754224005626665 EPGEQASVPLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 EPGEQASVPLSPK 13 0 P42858 P42858 HTT Huntingtin 1 EPGEQASVPLS(1)PK;EPGEQAS(0.001)VPLS(0.999)PK 92.939 0.00017717 4509900.0 2462.3 3188.8999999999996 2567.9 2294.9 3751.7 3339.2 2642.1000000000004 2538.1000000000004 4352.8 3481.6 4014.5 True False 2877.876042544795 3351.201389106833 2932.066833222912 2857.1506030219753 3199.829899846936 3692.5519276184314 3122.13537010365 2897.883447605258 3366.897749993269 2695.1041419237863 3017.588855436503 0.9537005140246324 1.1105559934280949 0.9716588222217504 0.9468323021787804 1.0603929339419804 1.2236762874325677 1.0346457120819477 0.9603307761375168 1.1157576168560701 0.8931316594267882 1.0 11.559180537634175 -6.8332402945314765 22.21622728609696 1.0603740019257555 1.0021755629073203 0.02696952983274692 0.09050911165154735 30.278722774535286 9366.906068215161 0.011584158215130659 0.021892034590062674 1.4681137475885767e-07 6.8332402945314765 -0.05819843901843513 EPGEQASVPLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 EPGEQASVPLSPK 13 0 P42858 P42858 HTT Huntingtin 1 EPGEQAS(0.001)VPLS(0.999)PK;EPGEQAS(0.008)VPLS(0.992)PK 115.68 1.8029e-05 10328800.0 7584.0 8366.2 7608.8 8046.3 8075.0 7561.7 6884.700000000001 7625.5 8729.900000000001 8444.7 9616.9 True False 8353.922096954278 9071.249035181454 8125.178923431325 8543.301676526837 7507.83985723769 7500.12002227364 7146.701025952395 7473.403420410978 8363.012662045021 7911.500200818483 8434.0822665519 0.9904956855927854 1.0755466627538655 0.9633743976691296 1.0129497681577142 0.8901786371010956 0.8892633229364868 0.8473596533786449 0.8860956277423558 0.9915735224935226 0.9380392496518694 1.0 13.042015378483026 -5.78691884890396 23.997534971667612 0.9640305598515988 1.033021148719101 0.17240459851616896 0.059900311990519775 191.73668440077824 180585.40415367286 0.0096376418945053 0.029984172171255638 1.6333571240899598e-06 5.78691884890396 0.0689905888675022 EPGFEAGPEAS(ph)DDDLWTR ddPTM_A549_PD325901_60min_R1 2 EPGFEAGPEASDDDLWTR 18 0 H9KVB4;O15417;O15417-2;H7C177 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 EPGFEAGPEAS(1)DDDLWTR;EPGFEAGPEAS(1)DDDLWTR 129.32 1.8217e-12 8575800.0 3973.8 4112.9 3818.7000000000003 3456.5 3844.8 3739.8 3765.2 4128.799999999999 4733.5 3577.8 5025.0 True False 4377.217250643055 4459.508517223808 4077.859945708549 3670.0001547189386 3574.754511839933 3709.34430872674 3908.486746396497 4046.447845019061 4534.567456189657 3351.8970974088343 4406.956856099506 0.9932516685714113 1.011924705151485 0.9253233192116537 0.8327742418534066 0.8111616765415454 0.8417019793585622 0.8868901770587804 0.9181954752787113 1.0289566256845764 0.7605922197240478 1.0 12.105567057429928 -8.686914087389711 4.933701286261523 1.0136743955243301 0.8979005390280469 0.0 0.09652749261889972 0.15852589903665568 7.112124984746649 0.011375986862181909 0.012822767875769659 2.0562973347440106e-09 8.686914087389711 -0.11577385649628325 EPGGRS(ph)PAFVQLAPLSSK ddPTM_A549_MK2206_60min_R1 2 EPGGRSPAFVQLAPLSSK 18 1 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 EPGGRS(1)PAFVQLAPLSSK;EPGGRS(1)PAFVQLAPLSSK 100.79 2.2012e-09 14855300.0 2348.2 2429.8 1785.45 1570.31 2446.9 1714.48 1851.0500000000002 1774.2 3087.9 2969.6000000000004 3058.3 True False 2744.518752021965 2553.4664414850827 2038.6536576104402 1955.036020493894 2086.9642513888302 1895.905135620283 2187.361824620705 2025.6982832596211 2388.4955803630337 2298.765297523228 2298.8397052139635 1.1938713020299605 1.1107631539918177 0.886818534144247 0.8504446900145785 0.9078337418026226 0.8247226334747088 0.9515068926552743 0.8811829196551484 1.039000490093208 0.9999676325014891 1.0 11.166690157175205 -5.587815060302711 5.242451951807949 0.9673069428061597 1.1756666082302814 0.5451727059602387 0.07355614737431147 0.131887802980949 6.833922488168331 0.012486074434000656 0.0523421270897071 2.583360052904922e-06 5.587815060302711 0.20835966542412165 EPGGRS(ph)PAFVQLAPLSSK ddPTM_A549_PD325901_60min_R1 2 EPGGRSPAFVQLAPLSSK 18 1 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 EPGGRS(1)PAFVQLAPLSSK;EPGGRS(1)PAFVQLAPLSSK 106.43 1.3127e-09 32993000.0 3095.7 3088.5 3072.1 2858.1 2871.4 3195.3 3007.2 3320.3 3200.2 3372.5 3641.3999999999996 True False 3409.9731850661087 3348.778734091692 3280.5911800380327 3034.6383457839424 2669.7227697922367 3169.278536198338 3121.6406416029818 3254.0740117750383 3065.7067229952754 3159.5597744455495 3193.530884736464 1.0677752331640613 1.0486132293560202 1.0272614539967893 0.9502454979496359 0.8359783782120983 0.9924057886353814 0.9774887903927647 1.0189580527709756 0.9599740330202766 0.989362523326992 1.0 11.640936687589507 -6.055205816660905 3.78673030853936 0.972084481689125 1.0556414205799431 0.39339178215043824 0.04585854091582749 0.19585892747651112 5.639624047326935 0.006711434323926571 0.02026811195657277 8.806314337281739e-07 6.055205816660905 0.08355693889081817 EPGPIAPSTNS(ph)SPVLK ddPTM_A549_PD325901_60min_R1 1 EPGPIAPSTNSSPVLK 16 0 Q14674-2;Q14674 Q14674-2 ESPL1 Separin 1 EPGPIAPSTNS(0.702)S(0.298)PVLK 193.32 4.6641000000000004e-35 14152000.0 5365.9 5521.9 6117.5 6360.2 6672.4 6138.5 7647.6 6703.0 7579.0 7458.5 8197.2 True False 5910.642217833197 5987.249892109733 6532.670337515923 6753.05510893777 6203.753642530372 6088.510091213191 7938.6336029272925 6569.303406598228 7260.480986682453 6987.5690371244245 7188.996366332114 0.8221790520738371 0.8328352925798567 0.908704081157986 0.9393599279816071 0.8629512836568005 0.8469207356575142 1.104275645499825 0.9137997951096395 1.0099436161471884 0.9719811613550086 1.0 12.811574659167848 -7.738541810560077 24.99994515662892 1.0033411752083086 0.8719409584152198 0.6106147091710806 0.052095050774267786 114.32793682961653 124824.86981782601 0.0074489857990510935 0.011044659646472764 1.82582096449774e-08 7.738541810560077 -0.13140021679308878 EPGPIAPSTNSS(ph)PVLK ddPTM_A549_MK2206_60min_R1 1 EPGPIAPSTNSSPVLK 16 0 Q14674-2;Q14674 Q14674-2 ESPL1 Separin 1 EPGPIAPS(0.001)T(0.001)NS(0.275)S(0.723)PVLK 94.119 7.0615e-06 9386600.0 6909.9 7660.4 7712.5 6075.1 10274.0 7882.5 7767.7 7344.8 9090.0 10584.0 10057.0 True False 8076.122189164714 8050.281639786123 8806.248471993349 7563.499772721603 8762.708209885504 8716.620918019973 9178.99054326261 8385.94789250664 7031.1295137472025 8193.067049092762 7559.569340920383 1.0683309888366523 1.0649127320268743 1.1649140413759578 1.0005199280043566 1.1591544193466765 1.1530578694260272 1.214221356972838 1.1093155594344537 0.930096569878299 1.0838007668959684 1.0 12.88408833294233 -8.74951277493464 22.934788231656807 0.9669900531033229 1.118668778082334 0.318187928900011 0.0671879224475939 42.121163492812144 80998.22766974298 0.010160875911909383 0.01146717572685054 1.7802755406125483e-09 8.74951277493464 0.15167872497901103 EPGPIAPSTNSS(ph)PVLK ddPTM_A549_PD325901_60min_R1 1 EPGPIAPSTNSSPVLK 16 0 Q14674-2;Q14674 Q14674-2 ESPL1 Separin 1 EPGPIAPS(0.002)T(0.003)NS(0.358)S(0.637)PVLK 132.51 3.658e-10 13537000.0 6071.5 5277.6 6112.8 6009.8 7178.2 6428.5 6388.3 6975.5 7024.0 6317.3 7109.4 True False 6687.874210397931 5722.361873738809 6527.651367252528 6381.011696753904 6674.027995445645 6376.148427362381 6631.410252311893 6836.368180326115 6728.805706617967 5918.424599882838 6234.988870199765 1.072636110444838 0.9177822114629481 1.04693873608204 1.0234199017181984 1.070415382350444 1.0226399052350021 1.06358012666339 1.0964523470123022 1.0792009170663333 0.9492277729909109 1.0 12.606171269428831 EPGS(ph)PPSVQR ddPTM_A549_MK2206_60min_R1 3 EPGSPPSVQR 10 0 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 EPGS(0.963)PPS(0.037)VQR;EPGS(0.941)PPS(0.059)VQR;EPGS(0.989)PPS(0.011)VQR 91.469 6.2863e-05 19272100.0 5285.5 6513.71 5992.25 4632.900000000001 8022.099999999999 7083.86 6105.110000000001 5532.34 9389.1 8581.77 8744.2 True False 6177.563181931739 6845.230016695121 6842.0411547879585 5767.960707978785 6842.059716811609 7833.469363314294 7214.329461176145 6316.566137080681 7262.483841311753 6643.142196701882 6572.773812357171 0.9398715608192062 1.0414522410349367 1.0409670787582177 0.8775535067302493 1.040969902835872 1.1918057104881576 1.097608052115351 0.9610198551493122 1.1049343927913493 1.0107060407605104 1.0 12.682286623369473 -6.9788351148346806 24.98875221576717 1.058630479111103 0.9812797307712763 0.23980589581499945 0.07155299450436418 310.3619513148894 366433.30358903744 0.01076949554050772 0.02035131708886253 1.0499409758115622e-07 6.9788351148346806 -0.07735074833982669 EPGSGGPQNLS(ph)GPGGR ddPTM_A549_MK2206_60min_R1 2 EPGSGGPQNLSGPGGR 16 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 EPGSGGPQNLS(1)GPGGR;EPGSGGPQNLS(1)GPGGR 112.67 2.8504e-07 12896200.0 5625.799999999999 4588.4 4810.9 4440.8 6421.6 4818.1 4841.799999999999 4951.8 6176.9 7332.4 7034.5 True False 6575.2975023955305 4821.929961359024 5493.157960961139 5528.796199355084 5476.991146642084 5327.948144004065 5721.492386725658 5653.732814251491 4777.842012482407 5676.005747427036 5287.639507676688 1.2435222735682716 0.9119248682438471 1.0388677127073576 1.0456076272461996 1.0358102398415194 1.0076231816236445 1.0820503891044568 1.0692356780456198 0.9035869418756427 1.0734479419760956 1.0 12.368408107079679 -8.750146797091126 24.956239325921405 0.9544716099979839 1.0475270040283886 0.04480012942777645 0.08479437477195428 221.42291940075935 489337.1303854762 0.01256787199265234 0.01418672604300919 1.7776784304226376e-09 8.750146797091126 0.09305539403040475 EPGSGGPQNLS(ph)GPGGR ddPTM_A549_PD325901_60min_R1 2 EPGSGGPQNLSGPGGR 16 0 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 EPGSGGPQNLS(1)GPGGR;EPGSGGPQNLS(1)GPGGR 115.66 1.7174e-07 20323700.0 7298.299999999999 7317.4 6527.9 8392.599999999999 8365.3 8805.3 7296.9 8650.9 8802.6 8769.099999999999 9541.5 True False 8039.218043275511 7934.062978417531 6970.922549451602 8910.991841022469 7777.750186718321 8733.592556187908 7574.587522516887 8478.351013000241 8432.65733386608 8215.417529456035 8367.95598855193 0.9607146660754239 0.9481482681400331 0.8330496191648729 1.0648946831476478 0.9294683429691718 1.043694848316148 0.905189694219181 1.0131925914284612 1.0077320369995573 0.9817711207725542 1.0 13.030659548380683 -6.269157596000776 24.9902761050508 0.9982150455782196 0.9173885916363128 0.30703261650736813 0.05258696395027633 454.7286412028557 1472335.0015041274 0.0065735185886716865 0.01555176152046705 5.380744915809179e-07 6.269157596000776 -0.0808264539419068 EPHGYS(ph)PER ddPTM_A549_PD325901_60min_R1 1 EPHGYSPER 9 0 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 EPHGY(0.003)S(0.997)PER 69.45100000000001 0.0012307 1449400.0 243.91 256.64 387.44 362.66 489.35 229.26 223.72 481.0 319.14 367.77 356.22 True False 268.6715636429481 278.26795347815846 413.7340082659859 385.0606845393813 454.979744165853 227.39298257091068 232.23378702428138 471.4060776627997 305.7276556392452 344.548939435979 312.4071982646301 0.8600043953384361 0.8907219648711379 1.3243421104385857 1.2325602184531255 1.4563676723621914 0.7278736976421823 0.743368873426417 1.5089475539660477 0.9786191142121928 1.1028841247893484 1.0 8.287283885191375 -7.269606782723074 24.987052609671178 0.9960006525605823 1.1522007467953739 0.07250498612462364 0.2509852083731712 1268.82077881475 3881781.9149155663 0.037209261442255386 0.06010759825879167 5.375182538701949e-08 7.269606782723074 0.15620009423479153 EPHS(ph)PADQPEQQAESTLTSAETR ddPTM_A549_MK2206_60min_R1 2 EPHSPADQPEQQAESTLTSAETR 23 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 EPHS(1)PADQPEQQAESTLTSAETR;EPHS(1)PADQPEQQAESTLTSAETR 120.15 6.8283e-16 11427500.0 1185.42 1019.6999999999999 1219.9099999999999 791.96 2078.4700000000003 1241.06 1009.3399999999999 1354.51 1498.49 1256.4299999999998 1524.62 True False 1385.4899152635548 1071.5983745091526 1392.9115816491933 985.9902355524354 1772.7298163325593 1372.3881454510447 1192.7240128914186 1546.5159405129025 1159.0844075968148 972.6015903714675 1146.0147766286211 1.208963395166185 0.9350650588133 1.2154394603417769 0.8603643300770079 1.5468647110708522 1.1975309336659472 1.040757970329325 1.3494729492602942 1.0114044174950714 0.8486815442578276 1.0 10.16240993087854 -8.944964231934195 24.998963591243612 1.0050307113304415 1.1631338302956986 0.20118757447126234 0.18368005803607812 120.91615801515073 54923.79686765657 0.028941612062478146 0.030809294047865324 1.135104297894752e-09 8.944964231934195 0.15810311896525708 EPHS(ph)PADQPEQQAESTLTSAETR ddPTM_A549_PD325901_60min_R1 2 EPHSPADQPEQQAESTLTSAETR 23 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 EPHS(1)PADQPEQQAESTLTSAETR;EPHS(1)PADQPEQQAESTLTSAETR 133.61 1.1767e-22 10123100.0 937.94 1350.75 1206.6399999999999 1056.01 986.51 1221.92 1279.96 1029.22 1250.4299999999998 1225.31 1330.93 True False 1033.158978325066 1464.582442957538 1288.529846515768 1121.237339327281 917.2209408747439 1211.969088646285 1328.6695782209863 1008.6913996925296 1197.8787755874582 1147.9437174872878 1167.2340474604014 0.8851343743552993 1.2547461635000192 1.1039172900407377 0.9605934146341968 0.7858072191008982 1.038325682225613 1.138306050197753 0.864172358480444 1.0262541417410946 0.9834734687399803 1.0 10.188878156123288 -6.251404400796502 23.771246908079306 0.993942857840349 1.098613984984621 0.11877347919677328 0.11880190713671718 546.5603922824747 1294704.867881955 0.015518037543170854 0.04048685938011845 5.605257896931065e-07 6.251404400796502 0.10467112714427207 EPIQPET(ph)PQPKPSVQK ddPTM_A549_MK2206_60min_R1 1 EPIQPETPQPKPSVQK 16 1 A0A5F9ZHU7;P49643 A0A5F9ZHU7 PRIM2 DNA primase large subunit 1 EPIQPET(0.999)PQPKPS(0.001)VQK 46.702 0.010927 2265300.0 1833.4 1995.3 1554.2 1447.0 2674.8 2036.4 2136.9 2107.5 3189.7 2250.0 2884.2 True False 2142.8330976735683 2096.8522473846356 1774.6089303302522 1801.5150649582988 2281.3404632861334 2251.890496347082 2525.1470695183725 2406.2445789480626 2467.238042904229 1741.7234373071337 2167.9735401295206 0.9884037134261102 0.9671945752895876 0.8185565448479746 0.8309672750206496 1.0522916544220553 1.0387075555417284 1.1647499486398314 1.1099049570523387 1.1380388170036566 0.8033877743743488 1.0 11.082131433532435 -6.857692313069255 6.321206229184825 1.0757244689902292 0.9006239019643028 0.2757598287714097 0.10364872116043312 0.12437250852561728 6.896625318345544 0.011023274188714034 0.021035744087149928 1.3877386592937528e-07 6.857692313069255 -0.17510056702592647 EPKEPS(ph)PKQDVVGK ddPTM_A549_MK2206_60min_R1 2 EPKEPSPKQDVVGK 14 2 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 EPKEPS(1)PKQDVVGK;EPKEPS(1)PKQDVVGK 51.193000000000005 0.004991300000000001 16362900.0 3251.0 3611.0 3214.5 3594.5 3970.4 2520.7 2904.9 2777.0 5001.4 4687.6 5297.5 True False 3799.6893206811214 3794.7844761719634 3670.3644360742464 4475.152661363235 3386.359419557077 2787.4388008947585 3432.682728365353 3170.6482542058234 3868.5908855946363 3628.6679043204085 3981.984546437878 0.9542200067250812 0.9529882479244234 0.9217425113710211 1.1238498314531444 0.8504200305313533 0.7000124607184345 0.8620532521744947 0.7962482569255968 0.971523329756596 0.9112712171538856 1.0 11.959271906820277 -8.972010542123371 24.216495731365516 0.9874368573789125 0.8957325224521084 0.06090359864724404 0.10302825924501793 194.61197493066345 168380.19901169042 0.018616776059437595 0.019494258213879376 1.0665702308450576e-09 8.972010542123371 -0.09170433492680408 EPKEPS(ph)PKQDVVGK ddPTM_A549_PD325901_60min_R1 2 EPKEPSPKQDVVGK 14 2 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 EPKEPS(1)PKQDVVGK;EPKEPS(1)PKQDVVGK 84.559 4.8158e-05 28088000.0 5649.4 5347.4 5889.4 5652.3 6451.5 6793.9 6914.9 6856.200000000001 7055.5 6895.3 7447.6 True False 6222.92292913153 5798.044164701932 6289.090099839198 6001.429733695318 5998.3688964667435 6738.572730910363 7178.050303478473 6719.447712415149 6758.981871162171 6459.929581240744 6531.592414226205 0.9527420779621254 0.8876922803807291 0.9628724055317931 0.9188310220680396 0.9183624017019084 1.0316891048243217 1.0989740094382259 1.0287610258380153 1.0348137854469759 0.989028275427999 1.0 12.673219051017735 -7.262465404466611 24.961292824150977 1.0256803260181038 0.927272012654409 0.718858984737053 0.031819279409840105 39.0173679236339 949220.2789402449 0.004801759014737634 0.007939442757244444 5.4643007630877737e-08 7.262465404466611 -0.09840831336369482 EPLDPDPSHS(ph)PSDKVGR ddPTM_A549_MK2206_60min_R1 1 EPLDPDPSHSPSDKVGR 17 1 Q8NFQ8 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 1 EPLDPDPS(0.055)HS(0.804)PS(0.141)DKVGR 57.989 0.0029023000000000005 2978200.0 611.84 422.19 340.96 454.81 663.14 400.4 539.25 500.03 613.53 800.78 653.95 True False 715.1036339481819 443.677667680709 389.3132549770957 566.2384704171969 565.5929844562461 442.7700622359907 637.2247448349391 570.9107837776509 474.566434606086 619.8832418341362 491.55616689816935 1.4547750228842569 0.9025981109756297 0.7920015680685087 1.1519303561794165 1.1506172082536688 0.9007517188319902 1.2963416751659762 1.1614355026409842 0.9654368443807908 1.2610628928647967 1.0 8.941212463056337 -8.782647364078626 24.519920865827675 0.9836784944358888 1.0875198155768282 0.0 0.19679873322046498 410.04186566198445 474073.59704794997 0.02996193046732395 0.0319128990445863 1.649501200356464e-09 8.782647364078626 0.10384132114093936 EPLIPAS(ph)PK ddPTM_A549_MK2206_60min_R1 2 EPLIPASPK 9 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 EPLIPAS(1)PK;EPLIPAS(1)PK 119.27 0.00015473 45860000.0 9293.3 9965.1 8793.900000000001 7383.9 17182.7 11619.0 10422.599999999999 10278.7 17249.9 11957.9 12624.7 True False 10861.781840629303 10472.281025616512 10041.007252883277 9192.955831475865 14655.147591785055 12848.514867932008 12316.251507680365 11735.73720219856 13342.825192429907 9256.602084877763 9489.638566005533 1.1445938393838475 1.1035489869056838 1.0581021798715176 0.9687361396889798 1.5443314821582121 1.3539519738885404 1.2978630768721295 1.2366895873399397 1.4060414524350313 0.9754430603961493 1.0 13.212137424704954 EPLIPAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 EPLIPASPK 9 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 EPLIPAS(1)PK;EPLIPAS(1)PK 89.40299999999999 0.0010912 45985000.0 11747.3 11954.400000000001 11501.7 11951.2 14625.2 13636.1 12134.7 13273.2 15829.099999999999 15623.8 16704.5 True False 12939.877248094816 12961.839241970456 12282.27452734073 12689.39848085549 13597.976406200958 13525.052122634539 12596.492648862635 13008.45561337604 15163.857974178036 14637.310601625613 14649.95239855009 0.8832709415066413 0.8847700585875824 0.838383237924808 0.8661733591783797 0.9281925317072535 0.9232147487368708 0.85983164355601 0.8879520738008331 1.0350789928627213 0.9991370759043745 1.0 13.838608356518659 -8.755445744782563 24.92571243112742 1.016565082528246 0.8838643628022377 0.826683138745554 0.02595678511832323 38.67601906030211 160841.63947216896 0.004805901839660372 0.005379988135309112 1.756120267780297e-09 8.755445744782563 -0.13270071972600828 EPLIPAS(ph)PKAEPIWELPTR ddPTM_A549_MK2206_60min_R1 2 EPLIPASPKAEPIWELPTR 19 1 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 EPLIPAS(1)PKAEPIWELPTR;EPLIPAS(1)PKAEPIWELPTR 145.25 3.0514999999999998e-21 27576000.0 11161.0 10770.0 7558.0 7392.299999999999 7024.6 6871.1 7353.7 6517.9 9480.400000000001 14296.3 14265.2 True False 13044.703939748393 11318.14699761064 8629.838048794256 9203.413831852955 5991.29064543135 7598.195241332956 8689.772102165403 7441.8322852315905 7333.104537087897 11066.755900788437 10722.757140508851 1.216543820662281 1.055525817595225 0.8048152108371565 0.8583066566978318 0.5587453457093808 0.7086046192940617 0.810404636447173 0.6940222731630791 0.6838823672863585 1.032081185442503 1.0 13.388388292947843 -5.588729940231832 2.4403021167495855 0.8028729973569226 1.2162253679784303 0.5145330684915796 0.1315623434616323 0.227495249711875 2.4157391235513255 0.02071970593527969 0.14560437550296368 2.5779237034143245e-06 5.588729940231832 0.41335237062150765 EPLIPAS(ph)PKAEPIWELPTR ddPTM_A549_PD325901_60min_R1 1 EPLIPASPKAEPIWELPTR 19 1 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 EPLIPAS(1)PKAEPIWELPTR 133.15 3.4494e-17 28003000.0 6810.4 6202.1 6111.9 6516.7 5906.4 7190.9 6119.6 5898.0 10051.0 10328.0 10845.0 True False 7501.786794448502 6724.772733271847 6526.690287840388 6919.221758500479 5491.55483997383 7132.339694535297 6352.484726773616 5780.359763108509 9628.59142329402 9675.888317412495 9511.133752119233 0.7887373881980142 0.7070421790434248 0.6862158032827723 0.7274865372341931 0.577381727888142 0.7498937435241195 0.6678998416312021 0.6077466592056443 1.0123494921043052 1.0173222845548304 1.0 13.215401609035911 -8.769711649369258 24.99999962029129 1.0058317356348037 0.6884377133373459 0.8645213540060345 0.05655856916068351 39.95011540282841 120734.70971033086 0.009264715142461586 0.00994375242666392 1.6993715789031522e-09 8.769711649369258 -0.3173940222974577 EPLLPPEDDT(ph)RDNVYYYDEEGGGEEDQDFDLSQLHR ddPTM_A549_PD325901_60min_R1 2 EPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHR 36 1 A0A087WXI5;P12830-2;P12830 A0A087WXI5 CDH1 Cadherin-1;E-Cad/CTF1;E-Cad/CTF2;E-Cad/CTF3 1 EPLLPPEDDT(0.987)RDNVY(0.011)Y(0.001)YDEEGGGEEDQDFDLSQLHR;EPLLPPEDDT(0.817)RDNVY(0.117)Y(0.033)Y(0.033)DEEGGGEEDQDFDLSQLHR 90.3 4.3032e-09 6783000.0 2715.19 3580.77 2899.92 2827.89 3353.2400000000002 2821.32 2613.8 3646.2599999999998 3082.73 3582.37 3670.3999999999996 True False 2990.8340899827663 3882.53405461341 3096.726009835582 3002.5623426958327 3117.7199904499976 2798.344105325664 2713.269589326242 3573.532483864367 2953.1735785823485 3356.17854682891 3218.964068582611 0.9291293802169416 1.2061439555996611 0.9620256529297472 0.9327728668987394 0.9685476209191755 0.8693306435563425 0.842901483681662 1.1101498518552526 0.9174298052611389 1.0426269058376652 1.0 11.652380757604737 -5.953073185992849 24.99988730132249 0.9546649318049643 1.0717490722626466 0.1636402539299895 0.09254087754483505 126.88666028606025 67596.49072700039 0.011316897287223468 0.03518570651762655 1.1141067718673509e-06 5.953073185992849 0.11708414045768234 EPLLS(ph)SSENGNGGR ddPTM_A549_MK2206_60min_R1 1 EPLLSSSENGNGGR 14 0 M0QZR4;M0QYC1;Q92888-2;Q92888;Q92888-3;Q92888-4;M0R2C7 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 EPLLS(0.882)S(0.055)S(0.063)ENGNGGR 68.044 0.0034673 6852000.0 763.5 649.79 602.92 484.56 910.4 511.17 444.44 437.37 557.81 516.22 566.38 True False 892.3601342171755 682.8615355225088 688.4231220400948 603.2772217527253 776.4813659995878 565.2616701128159 525.1889950754578 499.36853688944956 431.46692563952996 399.6055434696395 425.7322147072177 2.096059690551876 1.603969612663967 1.617033191893955 1.4170344665310515 1.8238727048963994 1.3277399515128416 1.2336134709388578 1.1729639422115912 1.0134702301921317 0.938631209161501 1.0 8.733802451235448 -7.2449896866772345 0.4690282818218849 0.9727034577226493 1.8931876313836944 0.8039027958079671 0.1555744205966494 0.36963973899830527 0.14640646725275605 0.04090058923472813 0.14073130362341324 5.688664397272991e-08 7.2449896866772345 0.9204841736610451 up EPLLS(ph)SSENGNGGR ddPTM_A549_PD325901_60min_R1 2 EPLLSSSENGNGGR 14 0 M0QZR4;M0QYC1;Q92888-2;Q92888;Q92888-3;Q92888-4;M0R2C7 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 EPLLS(0.821)S(0.151)S(0.028)ENGNGGR;EPLLS(0.907)S(0.038)S(0.055)ENGNGGR 111.12 9.7755e-06 4486700.0 1193.37 1564.6399999999999 1509.25 1508.83 1226.52 1911.51 1384.55 1849.5300000000002 2109.3 3483.3 3469.2 True False 1314.5200438874379 1696.497703904557 1611.676780857524 1602.027002298445 1140.3734664642932 1895.9432963191196 1437.2398079048312 1812.6396732217843 2020.6534562883378 3263.3638435363023 3042.5103930707255 0.43205112688562664 0.5575979979454817 0.5297194003110376 0.5265477501562653 0.3748133347585197 0.6231509679102835 0.4723861621567915 0.5957710702813195 0.6641401984658286 1.072589218090616 1.0 11.571046475787117 -9.935462370165418 0.4417563128463818 1.0443908266192443 0.4846886490594716 0.8930069506205599 0.06901661393501805 0.25517256541951516 0.09668576626747172 0.06028294504956401 0.01961255210264626 1.1602127394655728e-10 9.935462370165418 -0.5597021775597727 down EPLPGLTREPVAES(ph)PK ddPTM_A549_MK2206_60min_R1 2 EPLPGLTREPVAESPK 16 1 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPLPGLTREPVAES(1)PK;EPLPGLTREPVAES(1)PK 94.632 1.8345e-06 22159000.0 3157.0 4790.3 4057.8999999999996 3867.7 5208.0 4068.3999999999996 3423.8999999999996 3667.7 6197.6 6332.8 6839.5 True False 3689.8244187604773 5034.105808974399 4633.371238185001 4815.286673627647 4441.910098995881 4498.915387614648 4045.9783103205355 4187.607706860173 4793.853495533518 4902.216081679386 5141.0633894029 0.7177161881267965 0.9791954363665368 0.9012476383262678 0.9366324258038201 0.8640060941772941 0.8750943232655156 0.786992496272342 0.814541154168989 0.9324634093045665 0.9535412638140502 1.0 12.327851085315471 -9.186425205880168 1.9113258431128444 0.9775832672749674 0.8665068554981115 0.294918073768896 0.069338719131317 0.2528169476911352 1.908349200308821 0.014057626642897513 0.013047179987313218 6.509907146940808e-10 9.186425205880168 -0.1110764117768559 EPLPGLTREPVAES(ph)PK ddPTM_A549_PD325901_60min_R1 2 EPLPGLTREPVAESPK 16 1 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPLPGLT(0.004)REPVAES(0.996)PK;EPLPGLTREPVAES(1)PK 119.87 3.0339e-08 39032000.0 6587.400000000001 7368.5 8705.0 9307.599999999999 10044.7 10130.7 9259.4 10479.9 10602.2 8647.4 10366.0 True False 7256.1479986124305 7989.469354753001 9295.77364741743 9882.50931290669 9339.194924333804 10048.198938022886 9611.7715339381 10270.870173177495 10156.626404143652 8101.401688225487 9091.047715488052 0.7981641088793785 0.8788282280315902 1.0225195091189099 1.087059448172322 1.0272957767478212 1.1052850290186218 1.0572787466028708 1.1297784913920788 1.1172118684230659 0.8911405969658982 1.0 13.150230854860974 -5.68898010071758 2.2172503496839906 1.0654142413385115 0.7995531099421621 0.6221148490078015 0.06416724774270482 0.11741811898768609 1.055009534461366 0.006901803947476693 0.04326721925009589 2.0465384065385884e-06 5.68898010071758 -0.26586113139634937 EPLPGLTREPVAES(ph)PKK ddPTM_A549_PD325901_60min_R1 2 EPLPGLTREPVAESPKK 17 2 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPLPGLTREPVAES(1)PKK;EPLPGLTREPVAES(1)PKK 96.71799999999999 4.4383999999999993e-07 30199000.0 6502.9 6103.5 6498.5 7466.9 7873.4 8966.7 8357.4 8834.5 9875.7 9305.0 8509.7 True False 7163.069620818038 6617.863365235114 6939.527288655044 7928.113454439709 7320.399545755443 8893.67816809991 8675.445430344758 8658.288966968823 9460.658672671849 8717.480711998769 7463.060847432827 0.959803191646497 0.8867492173149777 0.9298500213946573 1.0623139240740416 0.9808843442933394 1.1916931068784187 1.162451386595484 1.1601525357986509 1.2676646842462986 1.168083831849963 1.0 12.865551733338522 -6.71911994150599 1.296069819704158 1.1378740779875811 0.9210368956526638 0.6273354862676528 0.07326535096482577 0.3256738910797757 1.0801563575131938 0.016087576812779763 0.04633294583982421 1.909325876670657e-07 6.71911994150599 -0.21683718233491733 EPLPPFENQDIHS(ph)ASA ddPTM_A549_MK2206_60min_R1 1 EPLPPFENQDIHSASA 16 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 EPLPPFENQDIHS(0.605)AS(0.395)A 82.55 0.00019652 5521100.0 720.73 710.69 670.13 741.89 1099.0 991.85 1058.9 1034.5 1421.5 1472.5 1492.9 True False 842.3716038432812 746.8610853975773 765.1645106692903 923.6530833047073 937.3385558364971 1096.8069086632556 1251.2884233763882 1181.1435430233782 1099.532519669048 1139.861227304336 1122.1717280560856 0.750661937725435 0.6655497253449336 0.6818604421577869 0.8230942379066455 0.8352897621652159 0.9773966686571502 1.1150596580649637 1.052551506594671 0.9798255402261337 1.0157636294035792 1.0 10.13207775584677 -6.887946569200052 1.5041953972662963 1.0054176357980642 0.7009749576961573 0.888674408865815 0.049308830469241324 0.099785814454899 0.45251350790396655 0.008164389195907474 0.019419557072799572 1.2943550748178406e-07 6.887946569200052 -0.30444267810190695 EPPADVWT(ph)PPAR ddPTM_A549_MK2206_60min_R1 2 EPPADVWTPPAR 12 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 EPPADVWT(1)PPAR;EPPADVWT(1)PPAR 92.295 0.00028346 5436700.0 2356.16 2583.5 1717.54 1506.88 2803.6000000000004 1895.83 2304.8 2129.81 2937.5 2892.0 2673.7 True False 2753.822205418651 2714.989114979305 1961.112998455424 1876.0656676464132 2391.194153906463 2096.4454722498945 2723.55232618557 2431.7170897695732 2272.1609402235877 2238.6951914187684 2009.7464996339704 1.3702336120103689 1.350911229587303 0.9758011763237783 0.9334837343854541 1.1897988897315976 1.0431392579271637 1.3551720710455788 1.209962097315485 1.1305709156042367 1.1139191892243603 1.0 10.972797822491497 -14.99999999950177 0.17155707831771005 0.3084168985792798 1.204662692240133 0.05406862290397341 0.14630587068118872 76.48926360426081 0.8253620131233572 17.614645267719364 0.19538501160004243 1.0000000011472188e-15 14.99999999950177 0.8962457936608531 EPPADVWT(ph)PPAR ddPTM_A549_PD325901_60min_R1 2 EPPADVWTPPAR 12 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 EPPADVWT(1)PPAR;EPPADVWT(1)PPAR 111.94 6.1686e-05 3382400.0 2305.9 2217.8 1978.9 2240.3 2601.2 2670.8 2265.7 2197.0 2320.1 2367.0 3343.7 True False 2539.993270486139 2404.7017893697766 2113.2000540924005 2378.678242909544 2418.5006856528407 2649.0498903009197 2351.922453338612 2153.1791114868415 2222.5942653650836 2217.5472160452523 2932.446097460681 0.86616878403515 0.8200327335776441 0.7206270750968969 0.8111583858163102 0.824738326050431 0.9033584257848201 0.8020343341946619 0.7342604228433603 0.7579318396644066 0.756210734091758 1.0 11.517888874368257 -10.795990466334429 1.0143662325689884 1.00140216985314 0.801887228574143 0.0 0.08720789028529874 0.2720114625961639 0.49138761255071783 0.0392142789423755 0.009551216013977466 1.5995931426198526e-11 10.795990466334429 -0.19951494127899694 EPPGLIFNKVEVS(ph)EDEPASK ddPTM_A549_PD325901_60min_R1 1 EPPGLIFNKVEVSEDEPASK 20 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 EPPGLIFNKVEVS(1)EDEPASK 61.801 0.00062509 5130100.0 1505.4 1466.2 1227.2 1597.7 1877.2 1536.2 1138.2 2094.5 1930.4 1695.7 1759.2 True False 1658.2270997830935 1589.7618196293477 1310.4851717530923 1696.3863003600309 1745.351947988433 1523.6896965254875 1181.514823846938 2052.723554396537 1849.2720011468286 1588.633212610027 1542.8295524876114 1.074796044131653 1.0304196060193844 0.849403726834313 1.0995293016165195 1.1312668630013476 0.9875943159558596 0.7658103398018916 1.3304927631745116 1.1986236575291929 1.0296880883883532 1.0 10.59136297044388 -8.265775956225996 24.99717425468702 1.114167595772096 0.9967182497621941 0.2234742766982034 0.1297231687658407 572.6848470525002 3301102.589334946 0.02276606809069291 0.028006029937747718 5.422805698762413e-09 8.265775956225996 -0.11744934600990187 EPPPRRS(ph)R ddPTM_A549_PD325901_60min_R1 1 EPPPRRSR 8 2 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 EPPPRRS(1)R 42.001000000000005 0.027399 4861600.0 343.23 240.3 225.79 207.6 244.98 250.17 247.27 266.19 242.86 302.46 367.73 True False 378.07445692742874 260.55092433292356 241.11346718556933 220.4229805061917 227.7734499351195 248.13269846359916 256.6799951613359 260.88063162798477 232.65343876839978 283.3626239818534 322.50154123253157 1.1723182949219697 0.807905981897494 0.7476350849800143 0.6834788437406607 0.7062708880851184 0.7694000391914076 0.7959031581069664 0.8089283252134395 0.7214025640908516 0.8786395962602298 1.0 8.33316224495625 -10.88362339785116 1.0818374896739036 1.002436826059928 0.7876748626002513 0.11471012056701702 0.1298295352141825 0.5526635597125218 1.1268976736117235 0.09132392376104094 0.020953088042751866 1.3073040365506117e-11 10.88362339785116 -0.21476196345967657 EPPQS(ph)ARR ddPTM_A549_PD325901_60min_R1 2 EPPQSARR 8 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 EPPQS(1)ARR;EPPQS(1)ARR 57.785 0.006679699999999999 9799700.0 1329.87 1309.4 1463.51 1461.03 1410.97 1478.78 1326.49 1494.23 1500.68 1594.6799999999998 1468.93 True False 1464.8774234014486 1419.7477333396992 1562.8325894005595 1551.274504860122 1311.8683347822503 1466.7373059679462 1376.9703028331792 1464.4264104492413 1437.6116383552746 1493.9916326502077 1288.2609223144773 1.1370968396446146 1.1020653570621346 1.213133583678677 1.204161733069662 1.0183250241149597 1.1385405553812964 1.0688597930606538 1.1367467452309792 1.1159320394291516 1.1596964611533171 1.0 10.331209108864368 -14.999999999987073 0.17522288719968557 0.4676349282393273 1.156494475404515 0.0 0.07017008204886467 33.26983255194055 0.36367352078956144 6.049930021349918 0.06191679327019768 1.0000000000297644e-15 14.999999999987073 0.6888595471651877 EPPSS(ph)PLQPQK ddPTM_A549_MK2206_60min_R1 2 EPPSSPLQPQK 11 0 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EPPS(0.06)S(0.94)PLQPQK;EPPS(0.037)S(0.963)PLQPQK 136.06 4.1645e-08 30286000.0 16033.3 17049.7 13856.0 15170.099999999999 20817.9 18004.1 15801.5 16410.7 23862.0 21544.0 26034.0 True False 18739.32906345021 17917.456904843282 15820.989151110509 18886.775181011668 17755.61448730538 19909.281911845646 18672.428012071014 18736.966980660975 18457.2950997839 16677.195437042184 19569.039298152667 0.957600870330881 0.9156022751987986 0.8084704062403321 0.9651355333930263 0.9073319449555975 1.0173867816661342 0.9541821510795221 0.9574801652337506 0.943188616393973 0.8522235140391652 1.0 14.256285311098644 -6.859935051820807 1.942981654736797 0.971882460130226 0.8999908456688608 0.054761222271095034 0.0566690046176593 0.28823211537928567 2.2066839755811696 0.0065702041355444754 0.014573828243044814 1.3805907147246823e-07 6.859935051820807 -0.07189161446136516 EPQES(ph)PKITSAFSSVKPSEAVPR ddPTM_A549_PD325901_60min_R1 2 EPQESPKITSAFSSVKPSEAVPR 23 2 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 EPQES(1)PKITSAFSSVKPSEAVPR;EPQES(1)PKITSAFSSVKPSEAVPR 87.48899999999999 2.7016e-07 9721400.0 3727.7 3158.6 3626.6 3561.2 3860.7 4134.200000000001 4124.9 5105.6 4216.9 4393.200000000001 4826.0 True False 4106.133359812299 3424.7863071076654 3872.722884517409 3781.1672359279883 3589.537750691955 4100.532445889644 4281.875326731891 5003.764802734285 4039.678357664766 4115.8126022518 4232.432594534568 0.9701591857870668 0.809176810406896 0.9150111190236886 0.8933791977716766 0.8481027566339043 0.968835853684888 1.0116818711445443 1.1822432350596097 0.9544578129563811 0.9724461076040851 1.0 12.047271376692025 -7.42031352368076 4.699051755228846 0.9984706559195299 0.8851494338508045 0.45645366126530484 0.06874965742360933 0.19148355067518683 6.864320529888225 0.010607171082971163 0.017067558546204308 3.799150309562953e-08 7.42031352368076 -0.11332122206872541 EPQKPEQPT(ph)PR ddPTM_A549_PD325901_60min_R1 1 EPQKPEQPTPR 11 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 EPQKPEQPT(1)PR 42.568000000000005 0.030362 21829000.0 5296.2 4862.7 4987.0 4757.7 5545.8 4684.1 4472.8 4624.6 5299.8 5161.9 6380.7 True False 5833.866325143627 5272.4967946471315 5325.447809267166 5051.572323479327 5156.282139971367 4645.954242608404 4643.0148516100735 4532.358725071481 5077.067836550951 4835.976753064637 5595.914350589875 1.0425224475654582 0.9422046986997484 0.9516671406355249 0.9027250967389864 0.9214369300394732 0.8302404131897884 0.8297151387101994 0.8099406890660714 0.9072811909667218 0.864197778966161 1.0 12.450158165870102 -4.848010193044324 1.376842385464189 0.9221563278215108 1.237960564155866 0.24686327233231375 0.06054387821954966 4.740783956810905 3.656743667126995 0.01069828513534527 2.744451527681958 1.4190242163005199e-05 4.848010193044324 0.31580423633435517 EPQPEVAAAEEEKLHKPPADS(ph)GVDLR ddPTM_A549_PD325901_60min_R1 1 EPQPEVAAAEEEKLHKPPADSGVDLR 26 2 O15427 O15427 SLC16A3 Monocarboxylate transporter 4 1 EPQPEVAAAEEEKLHKPPADS(1)GVDLR 40.836999999999996 0.022106 4467900.0 363.31 446.74 603.74 473.47 473.58 384.35 484.16 626.28 361.88 512.5 754.88 True False 400.19296374531405 484.38834763416656 644.7134269835497 502.71516657161175 440.31737456230655 381.21998103083655 502.5849737425178 613.7883540928445 346.67144207159896 480.140662536203 662.0345455785856 0.604489548797737 0.7316662716004269 0.9738365335907084 0.7593488435445064 0.66509727853777 0.5758309495732871 0.7591521879017404 0.9271243595852294 0.5236455474821562 0.7252501636702111 1.0 9.370762689941012 -11.088695457964036 1.4199432379342334 0.9998321424564746 0.7070054182894004 0.0 0.15282869239383698 0.3727285607784164 1.3437783872254287 0.10287906322493806 0.022595809571561105 8.152757826795115e-12 11.088695457964036 -0.2928267241670741 EPREEPGS(ph)PLSPAPR ddPTM_A549_MK2206_60min_R1 2 EPREEPGSPLSPAPR 15 1 B2RBV5 B2RBV5 LOC93622 1 EPREEPGS(1)PLSPAPR;EPREEPGS(0.998)PLS(0.002)PAPR 111.92 5.631000000000001e-07 3394900.0 615.54 532.6700000000001 428.58000000000004 205.01 711.02 536.7 477.78999999999996 630.19 729.11 747.1 906.1800000000001 True False 719.4281034918663 559.7806277824758 489.3590885091614 255.23745920324868 606.4298998824983 593.4932377673733 564.598258386065 719.5213623759337 563.9677491494191 578.3295911165154 681.150496704309 1.056195520626881 0.8218163687627457 0.7184302013679581 0.37471522143519564 0.8903023675629097 0.8713099977742684 0.8288891531575291 1.0563324343992686 0.8279634998111738 0.849048182324928 1.0 9.411829779291574 -6.9687304983692755 24.998720076704252 0.916395594689754 0.7324210334900824 0.1827052103039869 0.16225363122198588 238.0603087885019 190318.74238705283 0.023668145454140935 0.044728327103851835 1.0746560837711132e-07 6.9687304983692755 -0.1839745611996716 EPREEPGS(ph)PLSPAPR ddPTM_A549_PD325901_60min_R1 2 EPREEPGSPLSPAPR 15 1 B2RBV5 B2RBV5 LOC93622 1 EPREEPGS(0.994)PLS(0.006)PAPR;EPREEPGS(0.94)PLS(0.06)PAPR 53.778999999999996 0.004778800000000001 3625100.0 592.14 653.88 432.96000000000004 728.61 464.91999999999996 559.67 475.39 471.45000000000005 612.1 414.49 859.5699999999999 True False 652.2536168895713 708.9847623920596 462.34326919998273 773.6145849066296 432.26562308692843 555.1122330779973 493.4812265933895 462.0465599046296 586.3755656350878 388.31903066269393 753.8483392631741 0.8652318814247127 0.9404872644344284 0.6133107219575306 1.026220453921508 0.5734119193118249 0.7363712356527504 0.6546160558975663 0.6129171291353415 0.7778428831032812 0.5151155881596083 1.0 9.558130498148275 -10.299576635486604 0.9151048972077958 0.9869291187368235 0.7547199439197702 0.0 0.19608193960763404 0.4883435707282839 0.7934772169842317 0.06480031421440328 0.025208625529223188 5.0167604560656815e-11 10.299576635486604 -0.2322091748170534 EPRPNS(ph)SPSPSPGQASETPHPRPS ddPTM_A549_MK2206_60min_R1 1 EPRPNSSPSPSPGQASETPHPRPS 24 2 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 EPRPNS(0.437)S(0.437)PS(0.101)PS(0.025)PGQASETPHPRPS 48.422 0.0020894999999999998 3500000.0 414.73 379.6 317.47 346.02 461.98 328.21 460.28 395.72 426.28 448.74 624.18 True False 484.72628482500227 398.9200185973073 362.4920197606133 430.7949155334283 394.0233539812053 362.94096435183445 543.9069180391764 451.8145218416738 329.7282606292802 347.3693223365347 469.17887950837115 1.033137479105885 0.8502514414444986 0.7726094152841031 0.9181890625273595 0.83981477255345 0.7735662882611893 1.1592740888275044 0.9629898991086457 0.7027772882163532 0.7403771514619871 1.0 8.87399426044219 -5.255782440432474 22.562827971284783 0.8735393672050803 1.0331377642289783 0.11794312507583538 0.1266292489309961 296.68337786446256 1183171.6750817792 0.018929598871015887 0.2194506530034164 5.549036219888556e-06 5.255782440432474 0.159598397023898 EPRPNS(ph)SPSPSPGQASETPHPRPS ddPTM_A549_PD325901_60min_R1 1 EPRPNSSPSPSPGQASETPHPRPS 24 2 O00204-2;O00204 O00204-2 SULT2B1 Sulfotransferase family cytosolic 2B member 1 1 EPRPNS(0.31)S(0.31)PS(0.31)PS(0.071)PGQASETPHPRPS 61.111999999999995 8.8535e-05 10865000.0 804.69 913.42 683.63 1035.6 1185.5 991.46 1099.0 1063.9 808.57 1204.3 1117.3 True False 886.3815364185316 990.3971090477689 730.0252428011457 1099.5666599817537 1102.2345697529768 983.3858784775153 1140.823046395876 1042.6796798865962 774.5886147779167 1128.260292472876 979.8791831482538 0.9045824747196654 1.0107339007506233 0.7450155645266875 1.1221451367595707 1.1248678293293337 1.0035787017313653 1.1642486808736212 1.0640900407094789 0.7904939997696869 1.1514279636474045 1.0 9.936460068984266 -8.739576906972614 24.99987380878739 0.9010665861478602 1.0196125650350734 0.0 0.1408273558107904 343.906883429026 393259.51290173276 0.022405070585981506 0.02539442910447242 1.821474488996062e-09 8.739576906972614 0.11854597888721319 EPS(ph)NPER ddPTM_A549_PD325901_60min_R1 2 EPSNPER 7 0 E7EX17;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 EPS(1)NPER;EPS(1)NPER 71.708 0.020311000000000003 33774000.0 3864.7 3753.9 3874.0 4203.2 4155.2 3917.1 4006.4 3825.7 4336.9 4653.7 4310.7 True False 4257.041498958229 4070.2543273131946 4136.912936254462 4462.822117840196 3863.3530866618007 3885.200436310368 4158.865744386203 3749.3934122964074 4154.635174976003 4359.864587794591 3780.511227778734 1.1260491617318866 1.076641248253798 1.0942734162133765 1.1804811172224343 1.0219128720672366 1.0276918126211054 1.1000802520641564 0.9917688869024706 1.0989612051534863 1.1532473586532 1.0 11.884365623846739 -14.999999999999998 0.1541772672794749 0.7176512803135338 1.1079508864456649 0.0 0.06453102054454296 59.80393739116833 0.6019482458016794 5.2453711336979385 0.0859544424522968 1.000000000000004e-15 14.999999999999998 0.3902996061321311 EPS(ph)PALGPNLDGSGLLPR ddPTM_A549_MK2206_60min_R1 2 EPSPALGPNLDGSGLLPR 18 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR 79.97 0.00029702 9314300.0 1489.63 1956.65 1538.3400000000001 1465.27 2672.9 1722.8700000000001 2073.46 2319.7799999999997 3022.3 2632.6000000000004 2342.8 True False 1741.043126043132 2056.235127472132 1756.4997438452197 1824.2612157784686 2279.7199507692194 1905.182959851453 2450.180842699033 2648.6159190282992 2337.753875621362 2037.8938315798932 1761.0181020093742 0.9886571433062215 1.1676399720854125 0.99743423525346 1.035912812989788 1.29454657403464 1.081864495133572 1.3913433597890354 1.5040253794132779 1.3275013317318631 1.1572248060679193 1.0 10.7821940237829 -6.743420590812228 24.806540510078946 1.205530705821024 1.0524289942026857 0.2860078667682536 0.14363254524263983 358.7565633405833 493898.6166173137 0.02576168455467644 0.05353931368638286 1.8054248224041268e-07 6.743420590812228 -0.1531017116183384 EPS(ph)PALGPNLDGSGLLPR ddPTM_A549_PD325901_60min_R1 2 EPSPALGPNLDGSGLLPR 18 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EPS(0.996)PALGPNLDGS(0.004)GLLPR;EPS(1)PALGPNLDGSGLLPR 179.46 3.9665e-31 23666000.0 4512.9 4961.299999999999 5010.2 5199.200000000001 5105.6 4317.2 4860.9 5134.1 4087.8 5272.4 5711.1 True False 4971.046285778613 5379.406162683862 5350.2223007801 5520.342775760076 4747.00026936381 4282.0421545631 5045.884209486546 5031.6963478764665 3916.0039817074194 4939.499764206584 5008.670905645748 0.992488103016566 1.0740186895929265 1.0681920217096632 1.1021572149085648 0.9477564724831524 0.8549258346633244 1.0074297761904962 1.004597116213957 0.781844935608231 0.9861897212369863 1.0 12.290212107200144 -6.892024208801182 5.170438839203323 0.9098319803655789 1.0601898362726296 0.34312937241568087 0.07302358602335605 0.17436842582820786 7.321026288109458 0.013233609832553948 0.025420106250187133 1.2822591039193505e-07 6.892024208801182 0.15035785590705075 EPS(ph)PEK ddPTM_A549_MK2206_60min_R1 3 EPSPEK 6 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EPS(1)PEK;EPS(1)PEK;EPS(1)PEK 82.279 0.041775 200089000.0 17592.3 14398.9 10077.9 7332.4 6763.200000000001 4408.99 3266.13 3851.04 5459.2 19554.7 21882.1 True False 20561.450149559674 15131.742507325529 11507.097760246581 9128.838329163946 5768.342239156865 4875.546395349302 3859.5435435284962 4396.936713315375 4222.699916551013 15137.279688671033 16448.170654763253 1.2500751956634917 0.9199650724041766 0.6995974203924143 0.555006299531572 0.35069810255685796 0.296418762772101 0.23464880226122925 0.267320713385355 0.25672763282816224 0.9203017166098896 1.0 14.005639517670497 -5.535722752283396 1.5133282077714036 0.534304867435644 1.334713387583591 0.4681453287086764 0.2520327068588041 0.6433992388216047 1.9448659621126356 0.047468946990558133 0.6550873856403183 2.912575873700773e-06 5.535722752283396 0.8004085201479471 EPS(ph)PEK ddPTM_A549_PD325901_60min_R1 3 EPSPEK 6 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EPS(1)PEK;EPS(1)PEK;EPS(1)PEK 68.625 0.054640999999999995 234233000.0 12364.599999999999 10231.9 9240.5 8189.5 11254.8 8125.9 7011.3 7978.299999999999 8662.3 10351.5 12851.3 True False 13619.845089662569 11094.178121856168 9867.615897640515 8695.346815296036 10464.301674952165 8059.725364533557 7278.118858230573 7819.166547644726 8298.253654959684 9697.904523401956 11270.671571102795 1.2084324349032483 0.9843404673684979 0.8755126822203199 0.7715021026422498 0.9284541394837459 0.7151060443636849 0.645757336846826 0.6937622570506371 0.7362696714751071 0.8604548950096902 1.0 13.460285861646412 -5.324170276186465 1.5984271760497581 0.8299075473635731 1.3190811497249062 0.5767852240543467 0.10359039386140502 0.693942006883064 1.8179788295301562 0.0193528941985643 0.5056267189767898 4.7405608308629305e-06 5.324170276186465 0.4891736023613331 EPS(ph)PEKNSK ddPTM_A549_MK2206_60min_R1 3 EPSPEKNSK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EPS(0.994)PEKNS(0.006)K;EPS(0.915)PEKNS(0.085)K;EPS(1)PEKNSK 60.49 0.0022481 158663900.0 11028.199999999999 10600.0 9218.8 7162.6 6703.650000000001 4390.69 4471.27 4345.2 7266.1 15502.9 16939.2 True False 12889.490546396672 11139.494723739355 10526.164462056695 8917.437321541329 5717.551965271458 4855.309901495856 5283.64188194366 4961.145406616901 5620.339951577402 12000.78412276834 12732.72914186324 1.012311689252701 0.8748709408350189 0.8267013571700271 0.7003555343231309 0.44904371259049514 0.3813251540498376 0.41496538747312744 0.3896372373386491 0.4414088989844758 0.9425146792223532 1.0 13.636254060174263 -6.022774838859145 1.8912334505938446 0.6348136750341088 0.9599385312983527 0.30696883347412984 0.209326019531342 0.5030559489469382 3.4009369285913653 0.03912154012513567 0.16888568892517364 9.489103008873207e-07 6.022774838859145 0.3251248562642439 EPS(ph)PEKNSK ddPTM_A549_PD325901_60min_R1 4 EPSPEKNSK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 EPS(1)PEKNSK;EPS(1)PEKNSK;EPS(1)PEKNSK;EPS(1)PEKNSK 89.266 0.00050541 366369000.0 18484.699999999997 17170.3 16607.8 16279.8 18733.899999999998 15327.599999999999 13572.500000000002 15158.199999999999 16767.8 19198.100000000002 21090.7 True False 20361.253136283074 18617.30144017309 17734.90517881437 17285.36627189161 17418.09549244645 15202.777107449578 14089.008914656984 14855.857809622144 16063.107677595208 17985.928689631764 18496.677604962744 1.1008059701932662 1.0065213784759908 0.9588157158589395 0.9345119507977944 0.9416877919617896 0.8219193431457443 0.7617048431917761 0.8031635803413825 0.8684320514558465 0.9723869915322553 1.0 14.174978534977592 -5.3981445525620275 1.0491963835799973 0.9051723943352162 1.1678400285535655 0.4670462366645408 0.0703915753872796 1.3538254482161916 1.3541784830863974 0.013146191370263717 0.37346725227808025 3.998116524726322e-06 5.3981445525620275 0.26266763421834927 EPS(ph)PKQDVVGK ddPTM_A549_MK2206_60min_R1 2 EPSPKQDVVGK 11 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 EPS(1)PKQDVVGK;EPS(1)PKQDVVGK 102.38 6.458399999999999e-05 68890000.0 16585.4 17582.7 17307.2 15234.4 20730.8 17364.7 16181.2 15084.0 24137.0 25207.0 24002.0 True False 19384.610045901183 18477.584328216217 19761.62120641599 18966.82868389821 17681.326781924698 19202.221028245025 19121.114587154596 17222.203192812613 18670.008038868662 19512.7211929782 18041.640978499672 1.0744371905527847 1.0241631761897967 1.095333912805716 1.0512806848612657 0.9800287458882281 1.0643278541640653 1.059832340635829 0.9545807509048878 1.0348287088252015 1.0815380494618878 1.0 14.13904294452165 -2.0000000016693864 0.13765945097369708 0.9971981124847906 1.2386234146321309 0.02729909102853434 0.041865525953425485 79.53451321016446 0.7009500605045327 0.08064823582755784 3.7952970192405955 0.009999999961560958 2.0000000016693864 0.24142530214734026 EPS(ph)PKQDVVGK ddPTM_A549_PD325901_60min_R1 3 EPSPKQDVVGK 11 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 EPS(1)PKQDVVGK;EPS(1)PKQDVVGK;EPS(1)PKQDVVGK 115.58 5.7823000000000005e-06 135131500.0 29021.2 30026.3 30316.2 29262.5 34548.6 30903.8 29801.4 33486.7 33844.7 32431.3 35816.0 True False 31967.410859721742 32556.721678309008 32373.63963812017 31069.97816504064 32122.025522199634 30652.129698922225 30935.508584951804 32818.78149869203 32422.32495711461 30383.58218323972 31410.859056330315 1.0177184521567315 1.036479824379326 1.0306512018682221 0.9891476737176033 1.0226407837045768 0.9758449981884472 0.9848666835082082 1.0448227932842216 1.03220115371472 0.9672954862123211 1.0 14.938975779379819 EPS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 EPSPPR 6 0 O60293-2;O60293;G3V1X1;O60293-4 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 EPS(1)PPR 63.48 0.059868 11627000.0 2284.0 2545.2 2126.5 2091.5 2466.0 2453.3 1886.2 2262.9 2570.1 2610.9 2261.1 True False 2515.8699986080687 2759.692936380175 2270.8170776833044 2220.6872048588625 2292.796667238161 2433.3211381890214 1957.9803731682443 2217.7646842892914 2462.087634763503 2446.0473284210193 1982.9990342938484 1.2687197296109511 1.3916763894758575 1.1451428056251922 1.1198629784757588 1.1562268198757002 1.2270914388294365 0.9873834224359503 1.1183891902796834 1.2415979998902318 1.2335090870541265 1.0 10.953468259646995 -14.999999999999998 0.027714907344282703 6.166439166074198e-14 1.9164002843016326 0.11966572902370032 0.10566247254170362 1136.1160340731426 2.437933079311844 125.8615911497121 55.918389935427875 1.000000000000004e-15 14.999999999999998 1.9164002843015708 EPS(ph)PPRK ddPTM_A549_MK2206_60min_R1 1 EPSPPRK 7 1 O60293-2;O60293;G3V1X1;O60293-4 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 EPS(1)PPRK 57.96 0.014181000000000001 19951000.0 4498.8 4535.3 4045.7 3755.4 5087.3 4264.4 3967.8 4278.3 5336.2 6028.5 5472.4 True False 5258.087454900102 4766.127398167464 4619.441094734973 4675.473168586311 4338.964909105562 4715.655977520378 4688.697899964898 4884.762126744245 4127.559220160374 4666.657663024915 4113.452049443444 1.2782663786275397 1.158668519987325 1.1230083733101959 1.1366300402648208 1.0548232620561677 1.1463986746018866 1.1398450361416723 1.1875091937452291 1.0034295211290574 1.134486948415096 1.0 12.0061339107561 -2.000000000394376 0.10679340022557886 0.9114701386709645 1.8434543318894288 0.1371038570071822 0.0712722489789667 50.349863694678554 0.36490245806444227 0.3203889042036295 6.934936295373314 0.009999999990919155 2.000000000394376 0.9319841932184643 EPS(ph)PVRYDNLSR ddPTM_A549_MK2206_60min_R1 2 EPSPVRYDNLSR 12 1 Q9C0B5;Q9C0B5-2;Q9ULC8-2;Q9ULC8;Q9ULC8-3 Q9C0B5;Q9ULC8-2 ZDHHC5;ZDHHC8 Palmitoyltransferase ZDHHC5;Probable palmitoyltransferase ZDHHC8 1 EPS(1)PVRYDNLSR;EPS(1)PVRYDNLSR 170.49 3.2492e-16 132645000.0 5330.0 5343.1 5036.1 4977.1 7335.4 5591.5 5920.0 6613.8 8656.2 7107.5 7768.200000000001 True False 6229.573694011193 5615.040967774689 5750.294707268165 6196.48972343051 6256.372377145623 6183.188818662693 6995.5873702788 7551.326403913027 6695.584521110948 5501.910813626872 5839.141548586831 1.066864648197962 0.9616209713452866 0.9847842631353632 1.061198751883342 1.071454138435772 1.0589208648588297 1.198050657287431 1.293225440945266 1.1466727541022517 0.9422465216583807 1.0 12.51154056907028 -6.607011537313653 1.83952071783392 1.0985613409442363 1.0008486160831231 0.17559562320663602 0.0918331311461206 0.5175086154499395 3.504272059516878 0.014582838990791706 0.03820487076903002 2.4716584829386006e-07 6.607011537313653 -0.09771272486111315 EPS(ph)PVRYDNLSR ddPTM_A549_PD325901_60min_R1 2 EPSPVRYDNLSR 12 1 Q9C0B5;Q9C0B5-2;Q9ULC8-2;Q9ULC8;Q9ULC8-3 Q9C0B5;Q9ULC8-2 ZDHHC5;ZDHHC8 Palmitoyltransferase ZDHHC5;Probable palmitoyltransferase ZDHHC8 1 EPS(1)PVRYDNLSR;EPS(1)PVRYDNLSR 112.96 1.1625e-05 139080000.0 3818.5 4010.2 4194.4 3357.3999999999996 4443.0 3775.3999999999996 3570.7 3912.3 4472.7 4504.3 4634.700000000001 True False 4206.151308968875 4348.153627798125 4479.057206976178 3564.778972791367 4130.9390075179 3744.654394129882 3706.584942462013 3834.2661073600257 4284.7279732332245 4219.897729291354 4064.661281783956 1.0348097953005373 1.0697456261078035 1.1019509121336541 0.8770174746828613 1.0163058422680806 0.9212709582743818 0.9119049990889313 0.9433174972152142 1.0541414588309024 1.0381917303178743 1.0 11.988919418647287 EPS(ph)TKGLNPNPS(ph)HQMT(ph)K ddPTM_A549_PD325901_60min_R1 1 EPSTKGLNPNPSHQMTK 17 1 P08912 P08912 CHRM5 Muscarinic acetylcholine receptor M5 3 EPS(0.993)T(0.247)KGLNPNPS(0.815)HQMT(0.945)K 45.395 0.015786 56826000.0 2792.3 2604.1 2251.2 2947.8 2668.1 2822.5 2511.2 2789.4 3292.3 3788.7 3914.1 True False 3075.772240417385 2823.5566460897453 2403.9799695653196 3129.8789110604616 2480.701860445309 2799.514495796892 2606.7650901813654 2733.7632287580327 3153.936080281654 3549.480835416413 3432.6905135241923 0.8960237540493055 0.8225491447497036 0.7003194608118806 0.911785929645942 0.7226698272599243 0.8155452653734151 0.7593941486746832 0.7963908246279384 0.9187941842865545 1.0340229686981939 1.0 11.745124076495292 -8.997255513799816 1.676282392731854 0.9724424988005939 0.7992297432434331 0.606295924778955 0.06515394508632798 0.1600956642045466 0.9075348178095782 0.012186715860479693 0.012023804913430428 1.0063394226303563e-09 8.997255513799816 -0.17321275555716076 EPS(ph)TPHR ddPTM_A549_MK2206_60min_R1 1 EPSTPHR 7 0 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 EPS(0.556)T(0.444)PHR 49.423 0.03685 15350000.0 490.46 843.25 814.76 485.74 712.05 309.33 631.72 524.3 511.37 1251.9 1211.5 True False 573.2376574042645 886.1678231880383 930.305219454302 604.746321805697 607.3083882469313 342.06309528336413 746.4953468838717 598.6211306014088 395.5455114900887 969.0949205176896 910.6511143009889 0.6294810914982285 0.9731145213260471 1.0215824752692468 0.6640812406734902 0.6668946852528678 0.3756247479540285 0.8197380260791507 0.6573550739691427 0.43435461207743364 1.0641780428298953 1.0 9.830754629012091 -6.28446302148312 23.927399532988822 0.694447792905845 0.8845649044116942 0.10010115792727359 0.21527923751475392 752.3073429349485 781837.1179383365 0.03347872268303874 0.07785399472191686 5.194419001185426e-07 6.28446302148312 0.1901171115058492 EPS(ph)YFEIPTK ddPTM_A549_MK2206_60min_R1 2 EPSYFEIPTK 10 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 H0Y2V6;J3KQR7 CEP170;CEP170B Centrosomal protein of 170 kDa;Centrosomal protein of 170 kDa protein B 1 EPS(1)YFEIPTK;EPS(1)YFEIPTK 87.363 0.00072628 5526300.0 3300.4 3209.6 2636.1 2641.4 4508.3 3800.1 2689.8 3184.6 4187.8 4354.1 4200.8 True False 3857.4268329670813 3372.9549306899835 3009.9386187386276 3288.5431185769507 3845.135042108898 4202.224059697771 3178.5018426648485 3636.026802428473 3239.2699865424124 3370.505785946219 3157.625423818075 1.2216226800906722 1.0681934928847705 0.9532285229383318 1.041460805886398 1.2177299476704597 1.3308177809819535 1.0066114298071271 1.1515066907562246 1.0258563166195995 1.0674178642350611 1.0 11.624624325001623 -8.846825289695898 5.648980865346484 1.0113616741211502 1.1196121194005466 0.12944966384653644 0.10367734346079577 0.26767694262899894 13.705319014001093 0.018548893444793487 0.019694284475550265 1.4229010842507784e-09 8.846825289695898 0.10825044527939642 EPS(ph)YFEIPTK ddPTM_A549_PD325901_60min_R1 2 EPSYFEIPTK 10 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 H0Y2V6;J3KQR7 CEP170;CEP170B Centrosomal protein of 170 kDa;Centrosomal protein of 170 kDa protein B 1 EPS(1)YFEIPTK;EPS(1)YFEIPTK 96.64 0.00053211 11871700.0 4729.6 4444.0 4365.8 4877.200000000001 4651.3 4708.6 4756.700000000001 4848.6 4093.2 4733.200000000001 5143.9 True False 5209.745510252505 4818.511476219356 4662.089441688107 5178.4535670751375 4324.608734113889 4670.254722731353 4937.718821466114 4751.890869346885 3921.177038486425 4434.344944227033 4511.232909868705 1.1548385140691237 1.0681140992916711 1.0334402002364789 1.147902063701218 0.9586312257683349 1.0352501890369645 1.094538659412693 1.0533463831919918 0.8692029688621301 0.9829563298597435 1.0 12.139306057360518 -8.663458451009948 7.565665214796938 0.9383633852464753 1.0665913018587039 0.4295223378361459 0.05996178819741507 0.15917467684517173 10.856798853419155 0.01126535168523575 0.012767054505505939 2.17040883683422e-09 8.663458451009948 0.12822791661222854 EPSAT(ph)PPISNLTK ddPTM_A549_MK2206_60min_R1 2 EPSATPPISNLTK 13 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 EPS(0.048)AT(0.952)PPISNLTK;EPS(0.005)AT(0.994)PPIS(0.002)NLTK 117.76 1.5648e-05 50901000.0 13353.400000000001 15600.8 13843.2 13211.1 18194.800000000003 16972.3 16151.800000000001 15775.0 26383.0 22760.0 23116.0 True False 15607.127460714646 16394.814083595553 15806.37391863836 16447.820093068807 15518.369022505813 18768.29752069907 19086.372987714374 18011.154558911352 20407.29262499366 17618.500192493488 17375.6592308557 0.8982178605919886 0.9435506224984913 0.9096848475578639 0.9466012123362066 0.8931096550828004 1.0801488030664368 1.098454610218229 1.0365738830171771 1.174475877655012 1.013975927958264 1.0 14.084780094136349 -7.268019463997192 24.19277912088351 1.0816901337253704 0.9207405132974827 0.7053788892976565 0.04745201088580637 173.49273074267109 637875.1063278206 0.009408043887313144 0.015263929951993405 5.3948644353434974e-08 7.268019463997192 -0.16094962042788763 EPSAT(ph)PPISNLTK ddPTM_A549_PD325901_60min_R1 2 EPSATPPISNLTK 13 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 EPSAT(1)PPISNLTK;EPS(0.039)AT(0.961)PPISNLTK 135.86 2.1097e-08 87532000.0 23630.0 25122.0 26099.0 24859.0 28979.0 26343.0 25461.0 25642.0 29047.0 28585.0 28461.0 True False 26028.900204513415 27239.11910566668 27870.235086036475 26394.483971114754 26943.615012122726 26128.471341993823 26429.93228779378 25130.55019424016 27826.25560366344 26780.138221653382 24960.477429143873 1.042804580898042 1.091289987661144 1.1165745993902811 1.0574510862639404 1.0794511078006601 1.0467937328588997 1.0588712640942586 1.0068136823736276 1.1148126346002294 1.0729016821763542 1.0 14.607357909024886 -11.056749121868897 1.34909058922256 0.9998115758017647 1.0733306114850742 0.0 0.037298210101734224 0.35504296368629173 1.1477182871690212 0.02374058266432869 0.0052165601826752745 8.775075830247352e-12 11.056749121868897 0.07351903568330953 EPSEVPT(ph)PK ddPTM_A549_MK2206_60min_R1 3 EPSEVPTPK 9 0 P17096;P17096-3;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EPSEVPT(1)PK;EPSEVPT(1)PK;EPSEVPT(1)PK 134.38 4.9001999999999996e-05 1805673000.0 21545.42 23113.0 24125.4 21202.52 29035.03 22466.66 21321.24 22117.71 30025.06 28899.18 29131.94 True False 25181.76016105491 24289.35297639505 27546.744490921013 26397.13835181729 24764.01554947165 24844.067049038073 25195.033321399173 25252.96312514609 23224.43185016837 22370.835166647816 21897.675297358288 1.1499741328291964 1.1092206202968629 1.2579757493364705 1.2054767455156217 1.1308970113580574 1.1345527190292768 1.1505802775529637 1.153225754890638 1.0605889225588316 1.021607767165431 1.0 14.41849009800642 -8.932225014835199 0.7037479928037769 1.0092942175880475 1.1730596846753527 0.6972595781013738 0.03963257433988695 0.2245329474700403 0.23865285735118577 0.012099692444706515 0.011000927331290825 1.168893611846609e-09 8.932225014835199 0.16376546708730522 EPSEVPT(ph)PK ddPTM_A549_PD325901_60min_R1 4 EPSEVPTPK 9 0 P17096;P17096-3;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EPSEVPT(1)PK;EPSEVPT(1)PK;EPSEVPT(1)PK;EPSEVPT(1)PK 140.09 4.3982e-05 2561042000.0 36313.6 36715.600000000006 36551.5 36119.799999999996 40425.9 35245.100000000006 38930.2 39969.9 34275.9 38964.1 40319.0 True False 40000.129939340615 39809.75246540941 39032.10459202503 38350.83801198241 37586.52424578392 34958.075591075656 40411.71006442287 39172.66898872006 32835.40312065302 36503.90007634508 35360.01860319919 1.131224799065055 1.1258408235624522 1.103848531021237 1.0845819523554385 1.0629667554072861 0.9886328393479078 1.1428645023610544 1.1078237663929262 0.9286025408844735 1.0323495721532907 1.0 15.109831413292826 -8.755398637295409 24.999805168734728 0.9662845314180697 1.091736253504364 0.49222252636414143 0.04687752946749008 72.08191037920757 298312.6775699049 0.008092460939877404 0.009060376511892305 1.7563107627167744e-09 8.755398637295409 0.1254517220862943 EPSEVPT(ph)PKRPR ddPTM_A549_MK2206_60min_R1 2 EPSEVPTPKRPR 12 2 P17096;P17096-3;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EPS(0.009)EVPT(0.991)PKRPR;EPS(0.001)EVPT(0.999)PKRPR 76.358 0.00040194 11470500.0 1787.62 2348.2 2357.5299999999997 2750.0 2110.48 1799.73 1664.02 1518.3899999999999 2916.8 4219.5 3859.3999999999996 True False 2089.3265528871093 2467.713350026862 2691.863203912932 3423.750123452189 1800.0311877359502 1990.1762340359128 1966.3508945762364 1733.626432374354 2256.14945717248 3266.312019429978 2901.004465978737 0.7202079753373338 0.8506410034754318 0.9279072940016158 1.1801947096613963 0.6204854935060081 0.6860300483420558 0.6778172586896835 0.597595230447005 0.7777131968017511 1.1259245057135734 1.0 11.50233680117022 -4.379799235680226 17.353873768341696 0.8429727297225582 0.8105822110225549 0.0 0.19227315592191693 0.0 0.0 0.024621957120147076 0.0 4.170621371184523e-05 4.379799235680226 -0.03239051870000331 EPST(ph)PHR ddPTM_A549_MK2206_60min_R1 3 EPSTPHR 7 0 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 EPS(0.02)T(0.98)PHR;EPS(0.202)T(0.798)PHR;EPS(0.245)T(0.755)PHR 102.0 0.011429 26690000.0 2226.87 2333.79 2786.27 1995.6699999999998 2701.17 2246.89 1554.1 2010.24 2722.65 3527.65 3572.16 True False 2602.7112142556684 2452.569942576951 3181.4049828279935 2484.6092395890305 2303.8314712182614 2484.654408435129 1836.4598534037623 2295.197676101805 2105.974122178637 2730.75141494067 2685.0940853994407 0.9693184415429835 0.9134018639842563 1.1848392948788313 0.9253341449372022 0.8580077263384006 0.9253509670092273 0.6839461840051562 0.8547922728601021 0.784320420513439 1.0170039961688857 1.0 11.39075692563295 -6.511128602970782 24.02073438131574 0.8765090696207044 1.0188545141325371 0.26837974238890083 0.1065545218824602 372.7114497242292 761929.2524223464 0.015996168958130767 0.035346272254905706 3.0822750940066624e-07 6.511128602970782 0.14234544451183273 EPST(ph)PHR ddPTM_A549_PD325901_60min_R1 3 EPSTPHR 7 0 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 EPS(0.093)T(0.907)PHR;EPS(0.231)T(0.769)PHR;EPS(0.153)T(0.847)PHR 95.815 0.012555 41887600.0 1826.32 2211.61 2067.81 1925.1100000000001 2182.21 2302.7 2249.02 2173.64 2344.33 2382.56 2211.42 True False 2011.7266619342763 2397.9901363459708 2208.1440213516616 2044.0196724579723 2028.939097815808 2283.9475746577523 2334.6076868109667 2130.2850450124074 2245.8059627271773 2232.1247549897657 1939.429359346382 1.0372776158303902 1.2364410824192797 1.1385534671372826 1.0539283952816094 1.046152615994012 1.1776389604762292 1.2037601037440033 1.0984081656525746 1.1579725510002845 1.1509183070952513 1.0 10.921416513598363 -10.799352403581599 0.9471004170092449 0.9966614055040037 1.1311314191360111 0.0 0.07603225541289 0.5100206714114289 0.7787018254434999 0.0483227049709299 0.010928884650234743 1.5872582622762628e-11 10.799352403581599 0.1344700136320074 EPSTAS(ph)GGGQLNR ddPTM_A549_MK2206_60min_R1 2 EPSTASGGGQLNR 13 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 EPS(0.109)T(0.437)AS(0.454)GGGQLNR;EPS(0.085)T(0.369)AS(0.546)GGGQLNR 75.589 0.0010582 16849200.0 1936.3600000000001 2279.5 1697.73 1813.81 1889.4099999999999 2131.0 1946.35 2101.5299999999997 2194.19 2727.5 2570.7 True False 2263.170228543248 2395.5168134682876 1938.4936425746853 2258.193531425025 1611.4802918862924 2356.5010055566836 2299.9766010375242 2399.428313165705 1697.2094684014266 2111.3558556689823 1932.324242289354 1.171216599685112 1.2397074781974262 1.0031927355411232 1.1686411017384908 0.8339595688025234 1.2195163492669217 1.1902643203982102 1.2417317242384442 0.8783254027753794 1.0926509172019274 1.0 10.916121482093505 -8.770776440557459 24.999787746294658 0.942542547075115 1.1286657099142248 0.17883798546792695 0.12545336219115727 163.2948132364913 437217.32681775885 0.020618388722678006 0.02209666594114741 1.6952102101584356e-09 8.770776440557459 0.1861231628391098 EPSTAS(ph)GGGQLNR ddPTM_A549_PD325901_60min_R1 2 EPSTASGGGQLNR 13 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 EPS(0.058)T(0.154)AS(0.787)GGGQLNR;EPS(0.023)T(0.437)AS(0.54)GGGQLNR 106.58 9.1691e-05 19403800.0 3114.5 3240.8 2964.8999999999996 2538.7 3450.1 2628.4 2596.6000000000004 2873.3 2618.29 3076.1 2990.4 True False 3430.68174722628 3513.913589588589 3166.1159433920666 2695.5097331939737 3207.776878198856 2606.995181843242 2695.4150339140397 2815.9897774397546 2508.252376648741 2881.8745210294887 2622.599757707453 1.3081224983507251 1.3398588859248115 1.2072432837253553 1.0278006490591056 1.2231286412544078 0.9940499590841677 1.0277645401257256 1.073739814534778 0.9563992253401759 1.0988617354058938 1.0 11.35678193533407 -5.809694636680378 0.46936948583727356 0.9803597501939537 1.4967578082732207 0.6672248452004563 0.07343082363111571 0.9154309271825575 0.1836723315308003 0.013321894559442738 0.23666072037890776 1.549906013586018e-06 5.809694636680378 0.516398058079267 EPSVPASCAVSATYERS(ph)PS(ph)PAHLPDDPK ddPTM_A549_MK2206_60min_R1 2 EPSVPASCAVSATYERSPSPAHLPDDPK 28 1 Q92615;H0Y4V9;H0Y641 Q92615 LARP4B La-related protein 4B 2 EPS(0.009)VPAS(0.05)CAVS(0.275)AT(0.299)Y(0.097)ERS(0.357)PS(0.912)PAHLPDDPK;EPS(0.001)VPAS(0.02)CAVS(0.238)AT(0.277)Y(0.141)ERS(0.379)PS(0.943)PAHLPDDPK 53.482 0.019542 11416000.0 2121.42 2012.06 1916.49 1431.75 2904.6 2923.1 1945.85 2203.91 3387.5 3088.6 3311.5 True False 2479.463832260643 2114.4652597968884 2188.2771000441535 1782.5288142736997 2477.337187700352 3232.4205018032562 2299.3857575096285 2516.3209916913047 2620.2366587259235 2390.8831148741397 2489.1631572494634 0.9961033791776276 0.8494683257859972 0.8791216010372778 0.7161156989979726 0.9952490179220798 1.2985972785227529 0.9237585534772499 1.0109104276120857 1.0526576576929962 0.9605168339049645 1.0 11.281445082453951 -6.979191920392216 24.249151809580344 1.0375230385778962 0.8601487438843702 0.3798944918187982 0.10832634200341384 130.91915418449958 152568.28315203355 0.014592281312661208 0.027574537747800533 1.049078724639169e-07 6.979191920392216 -0.17737429469352595 EPSVPASCAVSATYERS(ph)PS(ph)PAHLPDDPK ddPTM_A549_PD325901_60min_R1 2 EPSVPASCAVSATYERSPSPAHLPDDPK 28 1 Q92615;H0Y4V9;H0Y641 Q92615 LARP4B La-related protein 4B 2 EPSVPASCAVS(0.005)AT(0.028)Y(0.013)ERS(0.957)PS(0.998)PAHLPDDPK;EPS(0.004)VPAS(0.05)CAVS(0.317)AT(0.156)Y(0.067)ERS(0.52)PS(0.886)PAHLPDDPK 116.97 7.0799e-20 45875000.0 3360.7 3704.5 3064.2 3251.3 3512.9 3482.6 2999.8 3479.3 3486.2 3272.8 4307.8 True False 3701.8757899834213 4016.6912159438825 3272.1550385314736 3452.125416761952 3266.1660228470923 3454.238860252352 3113.9590305535467 3409.902632041953 3339.687137587065 3066.1548494604567 3777.9679093941195 0.9798589820677166 1.0631882832980568 0.8661150960004411 0.9137519162558414 0.864529848103155 0.9143113290251095 0.8242417895637814 0.9025758592504313 0.8839903402256949 0.8115883784603618 1.0 11.883394731980061 -5.7573157925380425 24.999759115102563 0.9197969060444661 1.0215236378971468 0.3417722148995448 0.0590268057402405 97.82495142807569 593051.395597113 0.008508285682702009 0.03071315902344516 1.748574769007202e-06 5.7573157925380425 0.10172673185268077 EPTEEER ddPTM_A549_PD325901_60min_R1 1 EPTEEER 7 0 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 0 70.268 0.020011 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EPTGVEENKTDSLFVLPSRDDAT(ph)PVRDEPMDAESITFK ddPTM_A549_PD325901_60min_R1 4 EPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFK 38 3 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 EPT(0.009)GVEENKT(0.008)DS(0.036)LFVLPS(0.156)RDDAT(0.788)PVRDEPMDAES(0.003)IT(0.001)FK;EPT(0.002)GVEENKT(0.002)DS(0.008)LFVLPS(0.162)RDDAT(0.82)PVRDEPMDAES(0.003)IT(0.003)FK;EPT(0.001)GVEENKT(0.001)DS(0.005)LFVLPS(0.005)RDDAT(0.988)PVRDEPMDAESITFK;EPT(0.017)GVEENKT(0.018)DS(0.113)LFVLPS(0.113)RDDAT(0.739)PVRDEPMDAESITFK 81.347 1.5008e-06 64962000.0 5518.539999999999 6898.36 6374.52 5519.0 6191.93 6528.6 7324.5 6532.700000000001 6239.93 6586.0 5971.099999999999 True False 6078.778118265569 7479.709006996524 6807.133260302741 5859.8960954415825 5757.030197798861 6475.433246150433 7603.237855620193 6402.400173695992 5977.687442041096 6170.158836026209 5236.692553921541 1.160804850709333 1.4283269315467608 1.2998917141326471 1.1190070898955775 1.0993637947081047 1.2365502040598604 1.4519160285486772 1.2226037919490806 1.1415005522072619 1.1782549333368129 1.0 12.354440191348738 -9.390378564243989 0.9567088003927261 1.028825049815401 1.255163966593549 0.1937299594907611 0.1173259579659705 0.34129918208520327 0.6603476139700739 0.032138871796133166 0.024263116255286942 4.0702532875908207e-10 9.390378564243989 0.226338916778148 EPTPSIAS(ph)DIS(ph)LPIATQELR ddPTM_A549_PD325901_60min_R1 2 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 2 EPT(0.008)PS(0.016)IAS(0.979)DIS(0.997)LPIATQELR;EPT(0.228)PS(0.317)IAS(0.457)DIS(0.997)LPIATQELR 129.84 1.1183e-16 64223000.0 20811.2 23203.0 21697.0 21425.0 25516.0 19749.2 22874.0 25176.0 21061.0 23960.0 23630.0 True False 22923.937703604293 25158.398240935585 23169.488894660077 22748.37359029461 23723.844185421287 19588.36906302639 23744.48258713309 24673.84492981008 20175.87941160037 22447.16151096081 20723.659802911705 1.1061722650158272 1.2139939798375186 1.1180210983488896 1.0977005898880094 1.144770972455746 0.9452176521578586 1.145766858409679 1.190612332207044 0.9735673912561347 1.08316589465568 1.0 14.338991185337484 -8.27815009569991 0.4971412632769924 0.9807607025422616 1.1438328818338317 0.07562059121235698 0.07954848921520137 0.6521761458785554 0.3638066644896948 0.02557763013202534 0.03582384702686622 5.270476779848608e-09 8.27815009569991 0.16307217929157014 EPTPSIAS(ph)DISLPIATQELR ddPTM_A549_PD325901_60min_R1 2 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 EPT(0.012)PS(0.299)IAS(0.689)DISLPIATQELR;EPTPS(0.009)IAS(0.99)DIS(0.001)LPIATQELR 300.5 1.3065999999999997e-144 94484000.0 28285.0 28061.0 24199.0 24547.0 30252.0 26513.0 25207.0 26461.0 25511.0 26617.0 27044.0 True False 31156.472377683534 30425.79895008806 25841.28966040831 26063.21243971816 28127.20388373431 26297.086918357134 26166.266178799677 25933.21459674708 24438.861386892233 24936.398077514375 23717.759446040807 1.3136347237421901 1.2828277063568507 1.0895333397405709 1.0988901586177813 1.1859131950353585 1.1087508910015063 1.1032351617499687 1.0934091247424342 1.0304034595886669 1.0513808496222434 1.0 14.533680108288307 -2.000000000000004 0.20465989636664006 0.9902559276812255 2.525295145258502 0.7454956692496505 0.04757965828556037 15.105978008736717 0.16977972760696053 0.03541728111278389 7.586986667471174 0.009999999999999908 2.000000000000004 1.5350392175772765 EPVAES(ph)PK ddPTM_A549_MK2206_60min_R1 2 EPVAESPK 8 0 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PK;EPVAES(1)PK 93.84299999999999 0.0025499000000000003 177834000.0 8534.3 8681.7 8453.5 7354.9 11604.9 9004.0 7649.3 8796.3 12782.5 11435.8 11577.400000000001 True False 9974.681196397694 9123.561447461128 9652.333414326838 9156.850830174011 9897.834582918069 9956.797303628524 9039.078795857024 10043.202462538957 9887.284159458042 8852.44483749197 8702.412060015087 1.146197298818829 1.0483945582605878 1.10915609922407 1.0522198635303575 1.1373668029804727 1.1441422487194042 1.0386866001655812 1.154071123416965 1.1361544467524216 1.0172403669743746 1.0 13.087199614901346 -10.838154902514393 1.068170697630888 0.9995882284679468 1.1072037693576713 0.46449984408357825 0.04075394510734036 0.3439890546698362 0.6925422341487838 0.02776694515724722 0.006716386962346862 1.4515937762605571e-11 10.838154902514393 0.10761554088972447 EPVAES(ph)PK ddPTM_A549_PD325901_60min_R1 2 EPVAESPK 8 0 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PK;EPVAES(1)PK 104.79 0.0020340999999999996 227450000.0 16027.2 15535.1 16671.5 15552.5 18913.4 15530.9 15556.6 15938.0 16362.9 16861.0 19533.9 True False 17654.26954539895 16844.297397438193 17802.928243873586 16513.142602709762 17584.988031687833 15404.421499653487 16148.614925898155 15620.104086880881 15675.22421651753 15796.393582483743 17131.354135594454 1.030523880696507 0.9832437800372223 1.039201460839793 0.9639134461881089 1.0264797454131689 0.8991946216117933 0.9426350537197509 0.9117845538214874 0.9150020536875443 0.9220750127196884 1.0 14.064351572272829 -7.2405330948703295 24.92452053684434 0.9496937324816392 1.0064692024318338 0.5228665090931808 0.03429150883192513 749.2058101173573 893205.6023900845 0.006050001903137055 0.010472406175596416 5.7473402028621975e-08 7.2405330948703295 0.05677546995019456 EPVAES(ph)PKK ddPTM_A549_MK2206_60min_R1 2 EPVAESPKK 9 1 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PKK;EPVAES(1)PKK 74.46 0.00089959 196611000.0 26751.0 26412.0 24880.0 24437.0 25047.0 18740.8 18394.7 19653.2 23674.0 32298.0 34237.0 True False 31265.914800843057 27756.257985226788 28408.35811775618 30424.0660970186 21362.619479560257 20723.93901686378 21736.77888514653 22439.101285400742 18311.876799609603 25001.8593680648 25735.008006869964 1.2149176247583298 1.07854087233302 1.1038799020452048 1.1822054257335723 0.8300995855084833 0.8052820116213495 0.8446385126184492 0.8719290578580983 0.7115551234614438 0.9715116218883845 1.0 14.651444610956139 -6.764079936449952 24.9999101247081 0.8535709362995035 1.1372180414199557 0.7394543740528976 0.08058596361515004 34.54932268841812 327106.67576324876 0.01531832551488393 0.02991699026163534 1.721551676198128e-07 6.764079936449952 0.2836471051204522 EPVAES(ph)PKK ddPTM_A549_PD325901_60min_R1 4 EPVAESPKK 9 1 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PKK;EPVAES(1)PKK;EPVAES(1)PKK;EPVAES(1)PKK 93.05799999999999 0.00013946 321370000.0 21333.3 20806.8 21624.7 20669.4 25617.0 20005.2 21557.0 23169.0 21256.1 22676.0 24688.0 True False 23499.040911254582 22560.26205747096 23092.282181884853 21946.1018943867 23817.750293852365 19842.284283902918 22377.363431443027 22706.876119271106 20362.780037078886 21244.233490089624 21651.532510126275 1.0853292209345569 1.0419706802241218 1.0665426186846012 1.0136050131381071 1.1000491666219454 0.9164378676023425 1.0335233046888153 1.0487422129889075 0.9404775402182433 0.9811884438274214 1.0 14.402181523047009 -7.1535175231383015 0.6956917440287854 0.976067956599757 1.0684487993901073 0.30075569558442417 0.046025473240603035 0.6226784556687387 0.5693070853941098 0.008976643860512027 0.027541306940801095 7.022350090229116e-08 7.1535175231383015 0.0923808427903503 EPVAES(ph)PKKK ddPTM_A549_MK2206_60min_R1 2 EPVAESPKKK 10 2 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PKKK;EPVAES(1)PKKK 55.31399999999999 0.0035811999999999997 83323000.0 8600.900000000001 10846.2 10588.7 8744.7 8365.900000000001 5511.799999999999 6678.2 5886.1 8865.3 13599.9 13768.3 True False 10052.521648184034 11398.22525213413 12090.336881088624 10887.151892564505 7135.287192240719 6095.055017563269 7891.5424959790325 6720.472700425243 6857.323704975033 10527.673144459239 10349.251124251181 0.9713284108671567 1.1013574910193173 1.1682330185956735 1.051974849373678 0.6894496139455687 0.5889368172041797 0.7625230464730871 0.6493680189745615 0.6625912950267882 1.0172400899413838 1.0 13.337238757088816 -6.691715218028784 6.9001874266444485 0.7885849708726638 1.0850943349970108 0.5362197771882822 0.13596858974341183 0.16458189855044536 13.246403292457382 0.023063494528784426 0.04812446350738747 2.0336901350352453e-07 6.691715218028784 0.29650936412434703 EPVAES(ph)PKKK ddPTM_A549_PD325901_60min_R1 2 EPVAESPKKK 10 2 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PKKK;EPVAES(1)PKKK 46.068999999999996 0.008067399999999999 138063000.0 5623.9 5436.8 5509.3 7049.7 7218.4 6469.6 6808.4 6266.9 5846.200000000001 7612.0 7449.1 True False 6194.834187903636 5894.97821645126 5883.1942281122165 7485.14395796965 6711.404486128113 6416.913722589047 7067.49738769943 6141.9017632120585 5600.504544708141 7131.377020927953 6532.907923735491 0.9482506504333914 0.902351339597717 0.9005475504617597 1.1457599043719071 1.027322681488301 0.9822446294206886 1.0818302462249096 0.9401482211156198 0.8572759037916755 1.0916083777972887 1.0 12.67350959087806 -8.490721501649839 24.650297170923874 0.9308187941482114 0.998040204821425 0.0 0.08900301670114792 920.5143410216443 705625.9347045342 0.014139116418347015 0.017085344769437516 3.2305651096630292e-09 8.490721501649839 0.06722141067321352 EPVRADS(ph)PVHMEQQSR ddPTM_A549_MK2206_60min_R1 2 EPVRADSPVHMEQQSR 16 1 O95402 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 EPVRADS(0.999)PVHMEQQS(0.001)R;EPVRADS(0.999)PVHMEQQS(0.001)R 52.298 0.0074794 5347300.0 409.67 532.16 465.39 245.71 554.15 293.65999999999997 277.996 366.987 518.2 786.71 750.87 True False 478.8122805301249 559.2446709608615 531.3893000169833 305.908961030341 472.6352690780659 324.7349062842681 328.5042747614908 419.00853110055203 400.8285273953576 608.9916646061758 564.4082560422486 0.8483438635140794 0.9908513296428454 0.9414980988109541 0.5419994441177032 0.8373996376174323 0.5753546352446698 0.5820330784404769 0.7423855455955402 0.7101748124771472 1.078991418156346 1.0 9.140595281296177 EPVRADS(ph)PVHMEQQSR ddPTM_A549_PD325901_60min_R1 1 EPVRADSPVHMEQQSR 16 1 O95402 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 EPVRADS(1)PVHMEQQSR 54.658 0.0057274 2817000.0 284.63 263.72 153.37 221.8 207.69 169.52 0.0 200.03 230.37 372.93 244.93 True False 313.5254280664686 285.9446099254206 163.77861048873186 235.5000822556519 193.10257089160322 168.13948532417692 0.0 196.0402447295006 220.68835003325475 349.3831361553681 214.80516273919446 1.4595805057401496 1.331181272735982 0.7624519280646134 1.0963427473183416 0.8989661534627944 0.7827534644887626 0.0 0.9126421461644418 1.0273884818178387 1.6265118198279591 1.0 7.746884857999004 -5.65905561145264 5.38137288694935 0.9094202325660103 1.4253122708633248 0.2192360671692677 0.3617755625313562 0.19567353081869876 8.466029886132022 0.04222506247968446 0.17129814452714778 2.192524164431899e-06 5.65905561145264 0.5158920382973144 EPVVTPQDLEGPGRAES(ph)KESVGSR ddPTM_A549_MK2206_60min_R1 1 EPVVTPQDLEGPGRAESKESVGSR 24 2 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 EPVVTPQDLEGPGRAES(0.471)KES(0.164)VGS(0.365)R 112.9 1.6221e-12 9297300.0 1769.1 2048.5 2021.0 2284.6 2688.4 1930.2 2082.0 1454.7 2814.2 3097.3 3242.5 True False 2067.6808296576364 2152.7599001490617 2307.608189549246 2844.3271025595927 2292.939921301946 2134.4524828369354 2460.2724501554817 1660.908179831909 2176.7881933539475 2397.6177788317277 2437.297761552585 0.848349701983274 0.8832568322623536 0.9467896068961532 1.1670002522579455 0.9407713564883916 0.8757454737402565 1.0094262953691229 0.6814547676660945 0.8931154115397496 0.9837196819581121 1.0 11.251066798699807 -6.99031919175756 24.965566478329215 0.9256670850512067 0.9671254000693312 0.0342339590927524 0.1130597711580609 799.2547393752317 2061158.4904137054 0.016995250243665598 0.032093556672972076 1.0225411828474663e-07 6.99031919175756 0.04145831501812458 EPVVTPQDLEGPGRAESKES(ph)VGSR ddPTM_A549_MK2206_60min_R1 1 EPVVTPQDLEGPGRAESKESVGSR 24 2 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 EPVVTPQDLEGPGRAES(0.292)KES(0.354)VGS(0.354)R 64.733 6.4573e-05 7313300.0 1182.5 1263.5 1579.1 1373.2 1652.9 1292.5 1246.9 1391.1 1944.9 2500.0 2332.6 True False 1382.0770906507012 1327.8067531551587 1803.040124748746 1709.6340616452903 1409.76059958339 1429.2714921079375 1473.445589864972 1588.2926850650772 1504.3832553670989 1935.2482636745924 1753.3510435150547 0.7882489338130275 0.7572965824876802 1.02833949391793 0.9750666119990883 0.8040378478671065 0.8151656209372573 0.8403597187880081 0.9058612027178115 0.8580045969295264 1.103742613797906 1.0 10.775899155851457 -10.717468675336491 0.6789544758375168 1.0140319784310943 0.8639621074509762 0.40399278365256874 0.08333678766021527 1.0095185810277985 0.7028863535187069 0.08860512491814831 0.016171593221080603 1.9165992976554122e-11 10.717468675336491 -0.15006987098011804 EPYGHLGPAELLEAS(ph)PAAR ddPTM_A549_MK2206_60min_R1 2 EPYGHLGPAELLEASPAAR 19 0 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 1 EPYGHLGPAELLEAS(1)PAAR;EPYGHLGPAELLEAS(1)PAAR 138.35 1.1338e-17 17933600.0 1272.91 987.65 1104.97 1256.83 1441.93 1350.1399999999999 961.1700000000001 1328.58 1646.26 1990.1100000000001 2306.8999999999996 True False 1487.7460883384217 1037.9171664057706 1261.671361309367 1564.7534064212423 1229.824007113121 1493.010918649601 1135.8021474139994 1516.9102836056072 1273.3847385370145 1540.5427688085783 1734.033062798969 0.8579686975154868 0.5985567338205355 0.7275936015157952 0.9023780687869435 0.7092275421369505 0.8610048739437962 0.6550060502195141 0.874787405239612 0.7343485922244156 0.8884160295778498 1.0 10.759915691342576 -10.870274540916407 0.6813884231543096 1.035244863724736 0.7625071423847867 0.2971854149518228 0.09801479980715799 0.6934597228243312 0.4469325224575124 0.11491609137375845 0.017019188916661515 1.3481104000287575e-11 10.870274540916407 -0.27273772133994933 EPYGHLGPAELLEAS(ph)PAAR ddPTM_A549_PD325901_60min_R1 2 EPYGHLGPAELLEASPAAR 19 0 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 1 EPYGHLGPAELLEAS(1)PAAR;EPYGHLGPAELLEAS(1)PAAR 153.1 3.4807e-22 28831000.0 1564.38 1826.3899999999999 1436.69 1892.4499999999998 2107.2 2015.9 1510.85 2230.62 1754.23 1416.3 1721.79 True False 1723.1947059643112 1980.3062950162625 1534.1924229187996 2009.3423384342125 1959.197541445358 1999.4831787695139 1568.3462235188424 2186.128534212461 1680.505813599151 1326.8745762927304 1510.0207453260823 1.1411728688483647 1.3114431051002708 1.0160075135838598 1.3306720087480015 1.2974639901535114 1.3241428536385667 1.0386256138356331 1.447747351140117 1.1129024675990482 0.8787128126549001 1.0 10.560352654724673 -8.974772193937447 10.794418149099567 1.0496666872227234 1.2375406897449133 0.38129964464589683 0.13451640619295335 0.321601905706815 133.54958967586845 0.020705196702419045 0.021493773805319066 1.0598094948882917e-09 8.974772193937447 0.1878740025221899 EQAAAELEEVRRES(ph)PIEGQR ddPTM_A549_PD325901_60min_R1 1 EQAAAELEEVRRESPIEGQR 20 2 A0A0U1RQD2;Q6ZUS6-6;Q6ZUS6;Q6ZUS6-5;Q6ZUS6-4 A0A0U1RQD2 CCDC149 Coiled-coil domain-containing protein 149 1 EQAAAELEEVRRES(1)PIEGQR 50.945 0.0027541 3526800.0 107.19 146.93 230.86 241.63 143.93 90.24700000000001 193.39 119.42 247.17 190.37 213.38 True False 118.07184989089265 159.31230675087986 246.52754787395597 256.5549363184542 133.82085333154433 89.51205835329752 200.74956227706852 117.03807441682231 236.7823044568285 178.35000571125252 187.1356127272661 0.630942706041592 0.851320090436574 1.3173737712513782 1.3709573104738795 0.7151009440761903 0.47832722510040654 1.0727491114673269 0.6254185011133885 1.2652979355774367 0.9530521909326909 1.0 7.547940325670102 -8.785279409076354 24.998480446706473 1.125279558745329 0.8997464463262479 0.07404196499937976 0.27845178688606265 384.3715654829481 403047.346198793 0.050556149576204044 0.05383502808211708 1.6395346176162408e-09 8.785279409076354 -0.22553311241908114 EQADFALEALAK ddPTM_A549_PD325901_60min_R1 1 EQADFALEALAK 12 0 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5;M0QY43 Q7Z406 MYH14 Myosin-14 0 116.01 6.939899999999999e-05 951380.0 1040.6 1245.7 1217.6 1878.3 1250.4 1374.7 1162.0 1665.5 1440.9 1472.1 1573.3 False True 1146.240945950769 1350.6795107845305 1300.233658023603 1994.3183250711938 1162.5762176458213 1363.504898980332 1206.2205458707986 1632.2802959405253 1380.3439838647253 1379.1513547698426 1379.794073970418 0.8307333446159907 0.9788993417676386 0.9423389203884053 1.445373887809545 0.8425722646426922 0.988194488367954 0.8742033094836 1.1829883362548204 1.0003985449022295 0.9995341919401597 1.0 10.43023725410763 -8.934581800284006 24.999999394204174 1.0001688679048426 1.0159646750601403 7.944423825279046e-05 0.16633133841426162 757.4916518877661 289475.4579694631 0.027687866556256272 0.029475818412578514 1.1625675583222123e-09 8.934581800284006 0.015795807155297714 EQALS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EQALSPR 7 0 F8W9J4;Q03001;Q03001-9 F8W9J4 DST Dystonin 1 EQALS(1)PR;EQALS(1)PR 54.416000000000004 0.042517 35000000.0 1502.46 1865.49 1913.06 1653.35 2171.04 1497.29 1928.05 2070.2 2657.8 2661.3999999999996 2185.0 True False 1756.038516379748 1960.4354728479746 2184.360674467631 2058.4208242217005 1851.6828919592979 1655.732233979337 2278.35172791656 2363.6571897216027 2055.8125436344685 2060.1878915774255 1642.4041970678184 1.0691877916013615 1.1936376419080863 1.3299775282889355 1.2532973478127953 1.1274221627447765 1.008114955463042 1.3872052519009008 1.4391446356149333 1.2517092609144007 1.2543732506623373 1.0 10.681593503948706 -10.60429288630017 1.0120343385571107 1.0069797443317088 1.2310337410267835 0.0 0.14297470261829268 0.5018864189385119 0.9568670293930288 0.07469730016582778 0.023118962693337842 2.48717940963717e-11 10.60429288630017 0.22405399669507475 EQALS(ph)PR ddPTM_A549_PD325901_60min_R1 1 EQALSPR 7 0 F8W9J4;Q03001;Q03001-9 F8W9J4 DST Dystonin 1 EQALS(1)PR 50.978 0.050875 19650000.0 1160.4 1155.0 945.55 950.92 1112.1 963.06 1199.8 1242.5 1069.7 1470.9 1413.9 True False 1278.2029537586702 1252.3359034728524 1009.7207090540544 1009.6561687039875 1033.9899325367226 955.2171586615256 1245.4590455557523 1217.7173627776065 1024.7442289819535 1378.0271229746354 1239.999263450565 1.0308094459683752 1.0099489091533473 0.8142913780805717 0.8142393293802465 0.8338633441276594 0.7703368758489647 1.0044030527002044 0.9820307145901407 0.8264071271545613 1.1113128560576546 1.0 10.27612354832542 -11.051513546823063 1.3357297892361082 1.000389355328198 0.88840800413591 0.23789250687328478 0.09661544265589689 0.684327086908961 2.1647034976596076 0.06925714760123107 0.015192437202991 8.88150272070767e-12 11.051513546823063 -0.11198135119228791 EQAPDIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 EQAPDISPK 9 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 EQAPDIS(1)PK;EQAPDIS(1)PK 65.295 0.0058858999999999995 49533000.0 9723.2 14730.6 9663.099999999999 11960.8 15575.7 12339.3 11946.7 12489.2 19405.1 15081.0 15265.6 True False 11364.238450583422 15480.324620520272 11033.472882945722 14891.196536940719 13284.535163005028 13645.03653583556 14117.260749410432 14259.582346570893 15009.875833577107 11674.191625790614 11474.730210873444 0.9903708620368852 1.3490796154711446 0.9615452982494014 1.2977382703804081 1.1577209153393964 1.1891378956261243 1.2302913000980997 1.2426943452717107 1.3080809359120062 1.017382667065075 1.0 13.486172613536196 -4.419065986083197 16.31754220899036 1.165138235209853 1.1666084024256511 0.0 0.13612719724990036 0.0 0.0 0.01824486476264569 0.0 3.810079291952058e-05 4.419065986083197 0.0014701672157981793 EQAPDIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 EQAPDISPK 9 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 EQAPDIS(1)PK;EQAPDIS(1)PK 76.942 0.0019524000000000002 74650000.0 15272.4 18461.699999999997 15000.6 18600.0 18887.800000000003 15190.9 14644.7 16308.0 19726.8 17538.8 19277.0 True False 16822.84280505334 20017.532250341777 16018.630921935643 19748.8797563351 17561.186087372644 15067.190346926838 15202.012072387339 15982.724146621485 18897.751197794896 16431.39717480966 16906.051206971184 0.9950781882238986 1.1840454051202436 0.9475087189686486 1.1681544977334317 1.0387515021917901 0.8912306110083179 0.8992053724597032 0.9453848181904851 1.11780988750362 0.9719240154693367 1.0 14.045252104383733 -4.902978040873892 14.22500235925748 1.0365571708448618 8.94617434645019e-05 0.0 0.09881970593583937 1541972.4306030134 3328766.8002275615 0.013679120816696493 49513907.36709967 1.2503222483587699e-05 4.902978040873892 -1.0364677091013972 EQDLPLAEAVRPKT(ph)PPVVIK ddPTM_A549_MK2206_60min_R1 5 EQDLPLAEAVRPKTPPVVIK 20 2 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK 109.97 1.8683000000000002e-10 407837800.0 17305.600000000002 19168.299999999996 18992.199999999997 17647.399999999998 26219.100000000002 21233.5 18814.7 19262.8 28680.000000000004 27062.5 27845.8 True False 20226.362198701703 20143.884595571046 21685.57954357109 21971.013792221882 22362.305122231763 23480.414876343424 22233.08744857847 21993.360889850894 22184.025792548935 20949.062454277468 20930.919355016493 0.9663389292957202 0.9623984620027299 1.036054803697561 1.049691770321408 1.0683861871013425 1.1218052335917055 1.062212656380518 1.0507594299521186 1.0598686763958178 1.0008668085215582 1.0 14.353348060459549 -5.783433449495142 5.443566577458485 1.0434764033302055 0.9635714750910019 0.5095853795898304 0.03191433176832702 0.12044855501807805 10.144012435552435 0.005201890558343183 0.018016064047907593 1.6465182564921371e-06 5.783433449495142 -0.07990492823920359 EQDLPLAEAVRPKT(ph)PPVVIK ddPTM_A549_PD325901_60min_R1 5 EQDLPLAEAVRPKTPPVVIK 20 2 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK 98.96700000000001 1.7369e-07 431293200.0 16067.800000000001 15898.8 17898.4 18462.2 20842.5 19687.8 19250.5 18859.9 22676.5 19583.9 20841.0 True False 17698.99122751083 17238.647672843446 19113.09305582264 19602.568163301596 19378.59470272156 19527.46908426929 19983.088311777796 18483.72449919467 21723.48556465295 18347.369211790716 18277.68912198404 0.9683385634468876 0.9431524717262613 1.0457062119977625 1.0724861350072978 1.060232208425811 1.0683773508753927 1.093304967515972 1.0112725069255508 1.188524731965398 1.0038123030401511 1.0 14.157796059190533 -5.8936460353444335 3.1602812221576855 1.0808646580565422 0.9543960903472879 0.33359403877104943 0.052463190148751844 0.2111502755252806 4.138213320253237 0.009415195772592736 0.03515194502578211 1.2774795735783327e-06 5.8936460353444335 -0.1264685677092543 EQDNSES(ph)PNGR ddPTM_A549_MK2206_60min_R1 1 EQDNSESPNGR 11 0 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 EQDNS(0.387)ES(0.613)PNGR 45.077 0.049161 928140.0 176.86 200.6 177.49 195.7 102.52 0.0 0.0 0.0 0.0 261.12 247.45 True False 206.70964418814626 210.80968316812397 202.66075089712797 243.64650878530676 87.43944380742279 0.0 0.0 0.0 0.0 202.13281064428404 186.00133572742862 1.1113341921966848 1.1333772542206373 1.0895661050204097 1.3099180596334692 0.47010116064735635 0.0 0.0 0.0 0.0 1.086727736947518 1.0 7.539169171540386 -6.806812172858373 6.994346136477343 0.3910313179758745 1.153607534615657 0.5171724839863121 0.36950330689384064 0.1593551799072673 19.082117194548488 0.06482743413330794 0.12411042799505934 1.560227136407885e-07 6.806812172858373 0.7625762166397825 EQDNSES(ph)PNGR ddPTM_A549_PD325901_60min_R1 1 EQDNSESPNGR 11 0 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 EQDNS(0.283)ES(0.717)PNGR 46.592 0.033768 2312400.0 426.91 221.5 202.11 219.33 293.59 314.75 202.71 181.87 225.48 183.63 375.75 True False 470.2495889254683 240.16658235431754 215.82639998616153 232.87751596542887 272.96925123051545 312.1867803550299 210.42423997716833 178.24246017574504 216.0038597278217 172.03557046150817 329.5351320755002 1.4270089685543113 0.7288041819446817 0.6549420045954715 0.7066849428123312 0.8283464330837269 0.9473550767980162 0.6385487296964676 0.5408906147673131 0.6554805199899985 0.5220553249602925 1.0 8.364288470392639 -5.258315971118627 24.49365001717732 0.78518957530221 1.4270092870574604 0.605958805753237 0.1560477837078673 131.33412395630472 1029846.5533434052 0.023312666149125638 0.22820091082232832 5.516759212058684e-06 5.258315971118627 0.6418197117552504 EQDNSESPNGRT(ph)SPLVSQNNEQGSTLR ddPTM_A549_MK2206_60min_R1 2 EQDNSESPNGRTSPLVSQNNEQGSTLR 27 1 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 EQDNSES(0.017)PNGRT(0.492)S(0.492)PLVSQNNEQGSTLR;EQDNS(0.017)ES(0.068)PNGRT(0.457)S(0.457)PLVSQNNEQGSTLR 102.53 1.0449e-12 52878000.0 1461.21 1186.31 1024.31 1147.17 1452.1799999999998 1417.85 1119.58 1139.8600000000001 1903.41 2307.5699999999997 1742.29 True False 1707.8265248454206 1246.6881118603042 1169.5725604340364 1428.2267014984186 1238.566245691213 1567.8859459073408 1322.9931939217458 1301.438645674847 1472.2906741211848 1786.288334323033 1309.6313082422366 1.3040513876669872 0.9519382317864609 0.893054826250157 1.0905563210880767 0.9457365885316182 1.1971964445563912 1.0102027842457761 0.9937442984786415 1.1242024109039257 1.3639627604203788 1.0 10.354945001282813 EQDNSESPNGRT(ph)SPLVSQNNEQGSTLR ddPTM_A549_PD325901_60min_R1 1 EQDNSESPNGRTSPLVSQNNEQGSTLR 27 1 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 EQDNS(0.002)ES(0.041)PNGRT(0.574)S(0.382)PLVSQNNEQGSTLR 70.07300000000001 7.3416e-05 28173000.0 592.27 520.62 564.11 540.78 349.48 694.19 759.05 740.08 517.07 532.45 548.85 True False 652.3968143938707 564.494474516049 602.3938968689998 574.1827523995104 324.9337304405485 688.5367467979609 787.9360631180978 725.3185238184715 495.3393460593609 498.8310161315143 481.3449294468089 1.3553623908402757 1.172744200639655 1.2514807158378252 1.1928717168775338 0.6750538139333518 1.4304435440698824 1.6369468439682997 1.5068581373694991 1.0290735723104742 1.0363275597497235 1.0 8.910927282649157 -8.939165310744489 19.16933637860885 1.0128258332433466 1.2675297834745018 0.19288561115643488 0.23248906156581747 10.480168310945995 3301.6611510509383 0.04250239688284819 0.04524266459415553 1.150362429276597e-09 8.939165310744489 0.2547039502311552 EQDNSESPNGRTS(ph)PLVSQNNEQGSTLR ddPTM_A549_PD325901_60min_R1 1 EQDNSESPNGRTSPLVSQNNEQGSTLR 27 1 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 EQDNSES(0.002)PNGRT(0.14)S(0.858)PLVSQNNEQGSTLR 146.67 3.0072999999999998e-33 30813000.0 871.25 673.55 561.54 720.47 974.42 838.78 957.47 958.83 1042.1 766.8 766.31 True False 959.6986586196487 730.3124223239308 599.6494812143343 764.9717955939109 905.9801007665078 831.949253776623 993.9070447976882 939.7053834624163 998.304161000368 718.3841171370931 672.0587280393257 1.4279982069714174 1.0866794698947744 0.8922575605315933 1.1382514111908808 1.3480668622660816 1.2379115381832244 1.4788990951688517 1.3982489092938752 1.485441851060897 1.0689305668760791 1.0 9.39244349859581 -6.651548722378092 6.894587457184478 1.2737148183755582 1.1124413445689718 0.12895573094770973 0.1846311691340007 0.4161849156726043 23.91727740268342 0.03186735324633074 0.06661301403041485 2.2307519311361538e-07 6.651548722378092 -0.1612734738065864 EQDRVHS(ph)PCPTSGSEK ddPTM_A549_MK2206_60min_R1 2 EQDRVHSPCPTSGSEK 16 1 X6RLP6;Q96LT9-2;Q96LT9 X6RLP6 RNPC3 RNA-binding protein 40 1 EQDRVHS(1)PCPTSGSEK;EQDRVHS(1)PCPTSGSEK 135.98 8.096899999999999e-31 28828000.0 3313.0 4176.9 3613.5 3353.2 5062.6 4452.7 3595.2 3780.2 5586.4 5405.4 6324.1 True False 3872.153404926657 4389.4863690176335 4125.948635792279 4174.734150530869 4317.89824638567 4923.88175853695 4248.4013029774205 4316.054926376971 4321.089319647674 4184.3163857866575 4753.651433719263 0.8145640165074282 0.9233925604813001 0.8679535496703702 0.8782162951448359 0.9083329534339334 1.0358104348186292 0.8937132564752367 0.9079451841508043 0.9090042422960843 0.8802320582670158 1.0 12.214820404753311 -14.999916999506235 0.01395686881418835 2.062784830287188 0.006418409250733408 0.07919638568825416 0.05576225260079699 3612.6052142107 3.9233569022936616 354.35402930470707 235.18281092925807 1.0001911339634233e-15 14.999916999506235 -2.0563664210364547 EQDRVHS(ph)PCPTSGSEK ddPTM_A549_PD325901_60min_R1 2 EQDRVHSPCPTSGSEK 16 1 X6RLP6;Q96LT9-2;Q96LT9 X6RLP6 RNPC3 RNA-binding protein 40 1 EQDRVHS(0.996)PCPT(0.004)SGSEK;EQDRVHS(1)PCPTSGSEK 144.57 6.846e-15 44437000.0 9416.0 8911.5 8820.7 9527.900000000001 10398.3 9877.2 10009.900000000001 11009.4 7816.4 10342.099999999999 10512.7 True False 10371.905388307168 9662.503379911976 9419.325745178048 10116.416743569102 9667.959280187573 9796.763357975222 10390.832222127454 10789.808880292785 7487.903890263192 9689.09804100617 9219.704545495979 1.1249715581584514 1.048027442987022 1.0216515831605024 1.097260404999766 1.0486192081839083 1.0625897293814202 1.127024425875295 1.1702987690168267 0.8121631071053347 1.0509119889031042 1.0 13.170504803475323 -8.758936482619585 24.99991357332652 0.9112992455216402 1.0835500708110237 0.3740249308036505 0.0708772533902136 38.35405849065314 383094.8667870225 0.01310898889128948 0.014528856282326322 1.7420616385456897e-09 8.758936482619585 0.1722508252893835 EQEAEPEEQEEDS(ph)SSDPR ddPTM_A549_MK2206_60min_R1 2 EQEAEPEEQEEDSSSDPR 18 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 EQEAEPEEQEEDS(0.333)S(0.333)S(0.333)DPR;EQEAEPEEQEEDS(0.333)S(0.333)S(0.333)DPR 52.928000000000004 0.013872 1289000.0 0.0 237.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 156.0 True False 0.0 249.58773555548086 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 117.26089461902961 0.0 2.1284822733646163 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 6.873578158422994 -10.860564730984901 1.1257907969948888 0.9969775812063442 0.23393135381941146 0.0 0.6710090363553379 0.7084995714744885 1.6041588025439004 0.41730637492393324 0.10307818524822505 1.378590460675707e-11 10.860564730984901 -0.7630462273869327 EQEAEPEEQEEDS(ph)SSDPR ddPTM_A549_PD325901_60min_R1 2 EQEAEPEEQEEDSSSDPR 18 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 EQEAEPEEQEEDS(0.333)S(0.333)S(0.333)DPR;EQEAEPEEQEEDS(0.333)S(0.333)S(0.333)DPR 87.932 7.3130999999999995e-06 2914300.0 421.77 253.31 450.85 424.98 352.61 234.01 479.96999999999997 318.73 687.63 503.65 715.3 True False 464.58777990933646 274.65732269152255 481.4473921812918 451.23004940039186 327.8438900384622 232.10430014576815 498.23552099966184 312.3726801111521 658.7313023977385 471.84945304655344 627.322634660294 0.7405882623076699 0.437824665517217 0.7674637667776866 0.7192950237555842 0.5226080997635216 0.36999191057637604 0.7942253211849511 0.49794581424645584 1.0500678056267694 0.7521639216829279 1.0 9.293063807776528 -8.768254358026308 24.998977369006035 1.0236431644371267 0.6053745731930056 0.4379677202508615 0.1566773351834389 62.606831471610704 229656.27442626772 0.021889802171691602 0.02355727055553846 1.7050834615190082e-09 8.768254358026308 -0.4182685912441211 EQEKGEGS(ph)DSKESPK ddPTM_A549_MK2206_60min_R1 3 EQEKGEGSDSKESPK 15 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.94)DS(0.059)KES(0.001)PK;EQEKGEGS(0.984)DS(0.011)KES(0.004)PK;EQEKGEGS(0.972)DS(0.027)KES(0.001)PK 82.609 5.6168e-05 77174800.0 11541.4 11868.4 11482.9 10517.7 5365.530000000001 3469.88 2356.54 2979.34 4383.0599999999995 16778.9 17485.0 True False 13489.306159861308 12472.450865964915 13111.347887073245 13094.536972157503 4576.267644674613 3837.060398480069 2784.692814452163 3401.6705688460856 3390.303908308562 12988.53483654786 13142.991938549572 1.0263497248519162 0.9489810938240096 0.9975923251247296 0.9963132468909194 0.34819070620077075 0.2919472534427741 0.21187662805182203 0.2588201061638546 0.2579552604277643 0.9882479497268293 1.0 13.682006115145825 -6.746697392957624 24.35653541660145 0.5334296761596281 0.9895918433204073 0.45571027384377694 0.2654288800132901 177.8155276601965 293782.1243176547 0.04827095540677794 0.10012094028324427 1.7918539444040988e-07 6.746697392957624 0.4561621671607792 EQEKGEGS(ph)DSKESPK ddPTM_A549_PD325901_60min_R1 4 EQEKGEGSDSKESPK 15 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.992)DS(0.008)KESPK;EQEKGEGS(0.992)DS(0.008)KESPK;EQEKGEGS(0.998)DS(0.002)KESPK;EQEKGEGS(0.985)DS(0.015)KESPK 145.9 2.5236000000000002e-14 172676100.0 20586.699999999997 20651.6 21658.600000000002 20146.0 26867.300000000003 21120.1 21818.399999999998 22750.0 22597.8 21959.2 23560.0 True False 22676.64662887245 22391.9828087965 23128.4828397421 21390.372665114348 24980.233535153206 20948.10490794684 22648.711151486605 22296.233402970258 21648.093051966323 20572.69236441948 20662.26935914515 1.0974906112544571 1.0837136240742005 1.1193583065698154 1.035238302885009 1.2089782153622404 1.0138336957975616 1.096138606936815 1.0790796023139595 1.047711298100218 0.9956647068543794 1.0 14.334711095194098 -9.213108847877857 0.494021583146099 1.000997343741701 1.1007652928807972 0.3848317215909698 0.046546681509595116 0.5868178053865435 0.339194878359945 0.021574320353107024 0.014290911401067186 6.121969366581239e-10 9.213108847877857 0.09976794913909615 EQEKGEGSDS(ph)KESPK ddPTM_A549_MK2206_60min_R1 1 EQEKGEGSDSKESPK 15 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.013)DS(0.646)KES(0.341)PK 48.477 0.0055383 40531000.0 2635.1 2859.7 2031.3 2285.5 846.59 303.55 433.6 325.16 580.62 4310.7 3627.8 True False 3079.8404579904122 3005.2465152337186 2319.3688844291855 2845.4476025999948 722.0577324709915 335.67145951981774 512.3795073906903 371.25242576073657 449.11049705961494 3336.9098760888282 2726.917137813562 1.1294220918131102 1.1020674128893115 0.8505461542145912 1.0434668377497787 0.26478902584107716 0.12309558470447643 0.1878969845785323 0.13614364023485004 0.16469532235941392 1.2236931697764595 1.0 11.413055146748148 -6.748990901773568 24.682039436556444 0.47206592134930975 1.0235088438946547 0.3943699796557085 0.34956831168526387 187.61300842097174 371984.0600470193 0.05550722583525506 0.11489154672974179 1.7824161076772523e-07 6.748990901773568 0.551442922545345 EQEKGEGSDS(ph)KESPKTK ddPTM_A549_MK2206_60min_R1 1 EQEKGEGSDSKESPKTK 17 3 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.001)DS(0.495)KES(0.495)PKT(0.01)K 46.702 0.0074562 7236500.0 1742.9 1918.5 1602.0 1649.3 994.89 725.57 428.51 504.43 863.63 2983.0 2847.2 True False 2037.058910186137 2016.143455423958 1829.1876890934652 2053.378574039891 848.5429989228139 802.3493358056137 506.3647202767174 575.9344972520861 668.0191839337178 2309.138228216526 2140.161661277571 0.9518247836334537 0.9420519449079466 0.8546960363739673 0.9594502187344696 0.39648546849319577 0.3749012751338844 0.23660115468774567 0.26910794061616894 0.3121349176654923 1.0789550481144887 1.0 11.063504062183169 -6.7481148105920745 24.951022453970577 0.5640447381434258 0.9229155928331356 0.33903109997357794 0.26695203894013014 276.56097302582174 517873.0845996016 0.045687907042335045 0.09467287752760428 1.786015359348785e-07 6.7481148105920745 0.3588708546897098 EQEKGEGSDSKES(ph)PK ddPTM_A549_MK2206_60min_R1 1 EQEKGEGSDSKESPK 15 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.001)DS(0.094)KES(0.905)PK 67.995 0.00057132 39274000.0 4151.4 3704.7 3698.3 2916.4 788.82 565.77 597.8 470.7 923.01 5592.3 5699.9 True False 4852.054828014649 3893.253405946903 4222.774550920324 3630.9181309221717 672.7856229435351 625.6394058722691 706.4125219514639 537.423166458293 713.9497087440933 4328.995545978971 4284.457520762865 1.1324782202883694 0.9086922643251446 0.985603085211227 0.8474627448927705 0.15702936011925797 0.14602534926308977 0.16487793811191392 0.12543552219945986 0.166637130904958 1.0103952542417027 1.0 12.064896832838874 -6.5847200862275415 6.990772113233996 0.4659653461914734 0.985942490677191 0.4257783382400717 0.3167242671836686 0.22043995375190675 20.21895053937187 0.05632002651204118 0.11802934373794503 2.601835971921089e-07 6.5847200862275415 0.5199771444857175 EQEKGEGSDSKES(ph)PK ddPTM_A549_PD325901_60min_R1 3 EQEKGEGSDSKESPK 15 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.008)DS(0.425)KES(0.567)PK;EQEKGEGS(0.001)DS(0.004)KES(0.995)PK;EQEKGEGS(0.004)DS(0.012)KES(0.984)PK 111.95 6.5859e-07 222040000.0 18514.300000000003 18418.6 20100.800000000003 18325.3 21352.9 15322.900000000001 17431.3 19282.5 18450.7 18849.699999999997 21460.6 True False 20393.85810649272 19970.800062082315 21464.96116392972 19457.21216122407 19853.145967505967 15198.115382691296 18094.657660273366 18897.895410671375 17675.28124303761 17659.526725090072 18821.08224995206 1.0835645812314894 1.061086700374692 1.1404743297365059 1.0337987955646724 1.0548355139118812 0.8075048597553421 0.9614036759400197 1.0040812297454103 0.9391214069574896 0.9382843393681601 1.0 14.200061967857526 -7.024459968193275 24.883594269787963 0.9610195957277016 1.0779355667034443 0.5768792931984686 0.055687310471114984 448.1537419092303 455914.9846379872 0.008274613603141894 0.014378371682159833 9.452355170605448e-08 7.024459968193275 0.11691597097574269 EQEKGEGSDSKES(ph)PKTK ddPTM_A549_MK2206_60min_R1 1 EQEKGEGSDSKESPKTK 17 3 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.052)DS(0.039)KES(0.689)PKT(0.22)K 40.369 0.017993000000000002 38177000.0 1936.1 2149.3 2213.7 1854.2 1002.6 735.02 688.68 870.15 1036.0 3373.8 3292.0 True False 2262.8663468996388 2258.6901895974524 2527.635947157429 2308.479083238202 855.1188681361891 812.7993285332115 813.8042415816898 993.4964272226136 801.3476541520469 2611.656236794138 2474.5055454220865 0.9144721259913978 0.9127844525449138 1.0214711184760268 0.9329051969630705 0.34557161115204854 0.3284693905968067 0.32887549720276577 0.40149290797129694 0.3238415269000166 1.0554254936408547 1.0 11.272924559982371 -6.687175458633874 9.920151065636771 0.5789499319181903 0.9497915422972444 0.37145734811258624 0.2501978044042583 0.41678005406972396 52.53740384077181 0.04325523902319705 0.0900793041871453 2.055060166603881e-07 6.687175458633874 0.37084161037905405 EQEKGEGSDSKES(ph)PKTK ddPTM_A549_PD325901_60min_R1 3 EQEKGEGSDSKESPKTK 17 3 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGSDS(0.033)KES(0.92)PKT(0.047)K;EQEKGEGS(0.001)DS(0.007)KES(0.987)PKT(0.005)K;EQEKGEGSDS(0.17)KES(0.806)PKT(0.024)K 85.945 7.5236e-06 100199000.0 11224.1 11072.400000000001 10161.0 9417.900000000001 13166.199999999999 10793.7 10598.1 13307.2 11731.0 10965.7 11750.0 True False 12363.562369254303 12005.510006591181 10850.586563056688 9999.622293397219 12241.4515329242 10705.79968583983 11001.416495002846 13041.777456703549 11237.986865651385 10273.323830581925 10304.824489386903 1.1997838858864336 1.16503779554478 1.0529618019435336 0.9703825915420474 1.1879340153276612 1.0389114047372565 1.0675986288105512 1.2655991831918607 1.090555872856016 0.9969431154468064 1.0 13.331032312816 -10.096793696809828 1.0068030882916328 1.0097840030117424 1.1116144886522332 0.2299410610001743 0.08089185112659576 0.5658459673183406 1.1496677559615043 0.030990816964822563 0.015333138746965942 8.002142910505773e-11 10.096793696809828 0.1018304856404908 EQEPIGTDLDAVRT(ph)PEPLEEFPK ddPTM_A549_PD325901_60min_R1 1 EQEPIGTDLDAVRTPEPLEEFPK 23 1 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 EQEPIGT(0.003)DLDAVRT(0.997)PEPLEEFPK 93.6 2.7108e-07 6747500.0 2027.0 2246.4 2354.3 2005.2 2646.8 1672.2 1986.7 1962.1 2295.5 2272.6 2493.7 True False 2232.779547801467 2435.712011741487 2514.0769555559837 2129.0566498603844 2460.8978989642987 1658.5821576161438 2062.3049556639535 1922.964376262326 2199.02811781628 2129.107648155658 2186.9907088667337 1.020936915163421 1.1137276449627154 1.149559961715037 0.9735096912979708 1.1252438746022382 0.7583855527560044 0.9429875249596326 0.8792741407021238 1.0055040969770666 0.9735330102334683 1.0 11.094731375966996 EQEPIGTDLDAVRT(ph)PEPLEEFPKREDQEGSPPETSLPYK ddPTM_A549_MK2206_60min_R1 1 EQEPIGTDLDAVRTPEPLEEFPKREDQEGSPPETSLPYK 39 3 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 EQEPIGT(0.081)DLDAVRT(0.804)PEPLEEFPKREDQEGS(0.089)PPET(0.019)S(0.006)LPYK 44.382 0.0053621 8276700.0 870.74 868.11 1001.5 734.41 1167.0 1111.7 700.07 921.87 1431.9 1334.4 1063.2 True False 1017.6996244509022 912.293091002394 1143.5277594426368 914.3404829689175 995.3358459155526 1229.3393561132636 827.2636571471414 1052.5478956084708 1107.5769362744354 1032.9581132189508 799.1780971727709 1.2734328281157712 1.141539156578223 1.430879754447803 1.1441010285486468 1.2454493553273334 1.5382545648614017 1.0351430551884844 1.3170379660454143 1.3858950091258484 1.2925255545331091 1.0 9.642373233949558 -10.913648805097312 1.134995939961236 0.9980159343580043 1.2850175890367752 0.0 0.15937438009647353 0.40939482096213053 0.9261926274073571 0.09331785052174983 0.021505982023187733 1.2199757410291764e-11 10.913648805097312 0.2870016546787709 EQERS(ph)FR ddPTM_A549_PD325901_60min_R1 1 EQERSFR 7 1 M0QXN5;P37198 M0QXN5 NUP62 Nuclear pore glycoprotein p62 1 EQERS(1)FR 44.309 0.050476 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EQEVAEER ddPTM_A549_PD325901_60min_R1 2 EQEVAEER 8 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 0 ; 78.934 0.011602 1610070.0 1044.81 1299.71 979.7 1066.02 1261.26 1205.47 1138.32 1267.78 1144.57 1178.39 1662.33 False True 1150.87834205153 1409.2411230326422 1046.1883334146878 1131.8656342929212 1172.6734487107874 1195.6530519923044 1181.6393905126054 1242.4931333458294 1096.4677032493923 1103.9862542947053 1457.873948378088 0.7894223937068795 0.9666412686778917 0.7176123385554641 0.776381000258728 0.8043723190303308 0.8201347265464828 0.8105223307043803 0.8522637603395864 0.7521004847293095 0.7572576871429184 1.0 10.50965027050568 -10.876933293064829 1.0320391862660483 1.0042403973114284 0.807901036748271 0.0 0.09296713636664038 0.31288729276129673 0.5702620893498437 0.04627851343844395 0.010216399209014697 1.3275983590464047e-11 10.876933293064829 -0.19633936056315748 EQFDTLT(ph)PEPPVDPNQEVPPGPPR ddPTM_A549_MK2206_60min_R1 2 EQFDTLTPEPPVDPNQEVPPGPPR 24 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 EQFDT(0.062)LT(0.938)PEPPVDPNQEVPPGPPR;EQFDT(0.032)LT(0.968)PEPPVDPNQEVPPGPPR 87.439 3.1798e-07 8389700.0 2090.1400000000003 2374.45 1881.9 2008.96 2553.28 2006.0900000000001 1860.63 2147.21 2590.5699999999997 3100.59 3480.1 True False 2442.9045329832184 2495.2993629040484 2148.7817179182216 2501.155290185641 2177.695894309563 2218.3731122652302 2198.682386615175 2451.583593054837 2003.8100312902184 2400.1645655467237 2615.8951241261852 0.9338694470021031 0.9538988546941763 0.8214326706373604 0.9561374487523189 0.8324859334859617 0.84803595213178 0.8405086145606177 0.9371872635275335 0.766013137456943 0.9175308839449271 1.0 11.353088986455253 -5.722047603030538 24.976088984119233 0.8818325553476 0.9438842909166866 0.12560466586563646 0.06492732325796041 342.705407094061 217285.43304689188 0.011703304035200087 0.04532533852487478 1.8964980346145047e-06 5.722047603030538 0.06205173556908661 EQFEGLGST(ph)PDAK ddPTM_A549_PD325901_60min_R1 2 EQFEGLGSTPDAK 13 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 EQFEGLGS(0.114)T(0.886)PDAK;EQFEGLGS(0.103)T(0.897)PDAK 136.57 1.7911e-08 27342000.0 13531.4 13052.2 12167.6 12013.2 14463.3 11832.3 13342.8 13718.2 13163.2 13227.2 15729.4 True False 14905.097766709814 14152.154700699875 12993.36650572272 12755.228080043269 13447.44770367627 11735.941671786566 13850.567555460308 13444.57973928029 12609.99648026105 12392.032334631926 13794.783516881898 1.0804879792763058 1.0259062553160498 0.9419043430309426 0.9246414098803049 0.9748212204431795 0.8507521453616329 1.0040438502358622 0.9746133183479804 0.9141134012599097 0.8983129252783633 1.0 13.751835196039726 -5.568048098445186 3.177274209309397 0.9532692861579832 1.0748467420547267 0.48084217390385675 0.0446166318059712 0.17084027710570368 3.3120263026182015 0.0062063026811956514 0.0358003958771257 2.703658915239618e-06 5.568048098445186 0.12157745589674351 EQGTES(ph)RSST(ph)PLPTISSSAENTR ddPTM_A549_MK2206_60min_R1 2 EQGTESRSSTPLPTISSSAENTR 23 1 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 EQGT(0.079)ES(0.629)RS(0.214)S(0.215)T(0.857)PLPT(0.004)IS(0.001)S(0.001)SAENTR;EQGT(0.066)ES(0.607)RS(0.285)S(0.183)T(0.855)PLPT(0.004)IS(0.001)SSAENTR 65.73 0.00033193 148421000.0 1575.33 2085.9300000000003 1928.09 1392.1399999999999 2077.04 1620.79 1472.86 1744.58 2357.94 1857.15 2298.9 True False 1841.2071908792977 2192.0949272726057 2201.522154472046 1733.2143624955384 1771.5101674382502 1792.3009220066708 1740.4595969913564 1991.879557552176 1823.8703548564445 1437.6185251533086 1728.0196835877389 1.0655012835597784 1.2685590031713916 1.2740145123238498 1.0030061456805945 1.0251678173944268 1.0371993670150044 1.00719894195753 1.1526949469791963 1.0554685066258616 0.8319456883549525 1.0 10.75490393575877 -6.2682566785471145 24.918682083611593 1.033865995527743 1.2092783419656183 0.4618575932336493 0.08874516975118073 250.5787009211683 915920.0965826071 0.00887514686805601 0.02107538546144564 5.391918528926316e-07 6.2682566785471145 0.1754123464378754 EQGTES(ph)RSST(ph)PLPTISSSAENTR ddPTM_A549_PD325901_60min_R1 1 EQGTESRSSTPLPTISSSAENTR 23 1 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 EQGT(0.046)ES(0.768)RS(0.145)S(0.051)T(0.984)PLPT(0.004)ISSSAENTR 104.65 1.8438e-10 95563000.0 1369.8 1341.0 1691.9 1907.4 2043.5 1717.4 0.0 2028.5 1705.0 1890.0 1484.9 True False 1508.8610876065377 1454.0107762399095 1806.722508221199 2025.2157659803006 1899.9716096922873 1703.4140638021563 0.0 1988.0399761725357 1633.3447792972145 1770.6650774505827 1302.2667135566478 1.1586421367445197 1.1165230295020214 1.3873674950093913 1.555146687616081 1.458972720344848 1.308037782175916 0.0 1.5265997014873844 1.2542321494468307 1.3596792876742447 1.0 10.346809237711968 -7.556642994291088 24.99999431089205 1.0650135748340677 1.3428023753017113 0.13062543466042675 0.38374506519361157 317.51953365899266 235099.1632512793 0.056771035461431175 0.08420527337418214 2.7756008109653798e-08 7.556642994291088 0.27778880046764365 EQGTESRSS(ph)TPLPTISSSAENTR ddPTM_A549_MK2206_60min_R1 1 EQGTESRSSTPLPTISSSAENTR 23 1 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 EQGT(0.002)ES(0.033)RS(0.144)S(0.794)T(0.027)PLPTISSSAENTR 88.191 3.4652e-07 5562200.0 1308.8 1926.6 1936.6 1397.8 1527.8 967.46 1427.2 1449.7 2227.1 2246.8 1973.6 True False 1529.6934429121661 2024.6557108260595 2211.2390004359554 1740.2610627496272 1303.0626438644215 1069.8359750520274 1686.5037660239702 1655.1994145200513 1722.6654059478974 1739.2463195296298 1483.5006514110053 1.0311376954618965 1.3647824885687405 1.4905547889937054 1.1730773836158472 0.8783701190997366 0.7211563904838679 1.1368405968813577 1.115738919929518 1.1612164809698027 1.1723933642195414 1.0 10.534789844973506 -6.5219273269416185 24.998800781170097 1.045988846580084 1.3073199779650857 0.3440817871668078 0.162719878844685 30.41006817799768 799027.0356039263 0.0237286841666617 0.04989230807432571 3.0065793692038555e-07 6.5219273269416185 0.26133113138500175 EQGTGNSYTDTSGPKET(ph)SSATPGRDSK ddPTM_A549_MK2206_60min_R1 1 EQGTGNSYTDTSGPKETSSATPGRDSK 27 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EQGTGNSYTDTSGPKET(0.25)S(0.25)S(0.25)AT(0.25)PGRDSK 83.633 6.878699999999999e-07 11134000.0 1885.3 1957.1 1488.2 1266.3 2872.2 1813.9 1688.0 1354.3 3239.7 3085.2 2999.1 True False 2203.4925488403937 2056.7080305500276 1699.2491378956881 1576.5435568463665 2449.7031847803314 2005.845694030629 1994.68775017409 1546.2761723698047 2505.913122737823 2388.2511772355433 2254.340699050843 0.9774443365051884 0.9123323867665497 0.753767670792233 0.6993368648803382 1.086660585869626 0.8897704303857713 0.8848208928729913 0.6859105959542148 1.111594677678002 1.0594011713673455 1.0 11.138489851497457 -8.786911563196316 24.99995477732711 1.0526975023462841 0.8632272727822068 0.368481267021488 0.11406686960845556 178.420278974479 175111.6932680091 0.0202435056239098 0.02155469212529951 1.6333845254565398e-09 8.786911563196316 -0.18947022956407733 EQGTGNSYTDTSGPKETSSAT(ph)PGRDSK ddPTM_A549_PD325901_60min_R1 2 EQGTGNSYTDTSGPKETSSATPGRDSK 27 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EQGTGNSYTDTSGPKET(0.178)S(0.178)S(0.178)AT(0.465)PGRDSK;EQGTGNSYTDTSGPKET(0.136)S(0.136)S(0.136)AT(0.591)PGRDSK 169.65 1.0215e-48 34298000.0 4166.3 3583.0 4675.7 4699.7 4268.1 7250.6 5939.0 5954.9 5516.5 5443.6 6164.7 True False 4589.259708932047 3884.9519845395926 4993.021119268197 4989.989795206883 3968.3233801456586 7191.553517528771 6165.011894945499 5836.124847971325 5284.660689145504 5099.890166989413 5406.480981253061 0.8488441418448112 0.7185731343568282 0.9235251426170676 0.9229644592313635 0.7339937741214285 1.3301727209372303 1.1403003018641218 1.079468302618293 0.9774677294658081 0.9432919832092724 1.0 12.400474149920049 EQGVEEHET(ph)LLLR ddPTM_A549_PD325901_60min_R1 2 EQGVEEHETLLLR 13 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 EQGVEEHET(1)LLLR;EQGVEEHET(1)LLLR 87.148 0.00017358 6996700.0 150.86 108.14 0.0 0.0 321.39 0.0 196.01 185.75 178.58 219.245 341.63 True False 166.1751961427378 117.25333731736299 0.0 0.0 298.81667513530914 0.0 203.4692678107876 182.04507053194396 171.07490362867838 205.40183328341425 299.6116757709998 0.5546352481595189 0.3913510280119472 0.0 0.0 0.997346563235078 0.0 0.6791099421849766 0.6076033921691532 0.5709887746812475 0.685560176367785 1.0 8.22695003603034 -9.949091215001763 0.26082700230767925 1.1972633128955792 0.24645628649987947 0.2544212235041149 0.30196261181340256 2.2456843803115816 0.30676060942433075 0.7166576633186184 0.23461123194709435 1.1243687976460924e-10 9.949091215001763 -0.9508070263956997 EQGVLSFWR ddPTM_A549_MK2206_60min_R1 2 EQGVLSFWR 9 0 P05141;P12236 P05141;P12236 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed 0 ; 123.86 0.00026260000000000004 4842700.0 2268.3 1910.6999999999998 1478.62 1754.69 3315.6 2410.3 1956.56 2524.0 3305.8 2977.1 3078.5 False True 2651.1335853894175 2007.9464687404522 1688.3105498423088 2184.5891287710288 2827.8796321487603 2665.3563461723497 2312.041625877142 2881.7847294258186 2557.041578277833 2304.5710423142514 2314.0234877223243 1.1456813638477403 0.8677295106960469 0.7295995735566626 0.9440652354489726 1.2220617669409315 1.1518276976504849 0.999143542900192 1.245356732425537 1.1050197164570312 0.9959151471632741 1.0 11.176187792775833 -6.542253927518843 23.99229714589013 1.0797774260139816 0.897535466981366 0.3264200775417907 0.12212368668517845 131.7998186301857 163207.26138990273 0.017335062891687753 0.03609065033624456 2.869102556741058e-07 6.542253927518843 -0.18224195903261564 EQGVLSFWR ddPTM_A549_PD325901_60min_R1 2 EQGVLSFWR 9 0 P05141;P12236 P05141;P12236 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed 0 ; 144.65 9.2637e-05 8703800.0 4461.4 3948.3 3651.1000000000004 4334.5 4059.6000000000004 3978.4 3582.1000000000004 3484.2 5611.6 4445.6 5667.1 False True 4914.318043690905 4281.037097560055 3898.885601847875 4602.2322206362605 3774.467700859709 3946.0012294343146 3718.418775700335 3414.7048976979772 5375.763966864662 4164.904057309157 4970.082626706768 0.9887799485030266 0.8613613533416683 0.7844709826144923 0.9259870642604892 0.7594376159015114 0.7939508305617404 0.7481603536567764 0.6870519373961794 1.0816246671590453 0.8379949329069543 1.0 12.27905412118792 -8.775927908397039 24.999312048859778 1.0385449993293363 0.8173656093969747 0.2572970621866062 0.10154984521113543 116.50982925358386 201031.84110941814 0.014640615032147397 0.015619742583308496 1.675220934681113e-09 8.775927908397039 -0.22117938993236164 EQHNVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EQHNVSPR 8 0 P50443;C9JAN6 P50443 SLC26A2 Sulfate transporter 1 EQHNVS(1)PR;EQHNVS(1)PR 76.143 0.0047079999999999995 15094100.0 904.4300000000001 984.8100000000001 824.21 590.01 1083.49 871.49 616.91 622.5 1005.29 1174.51 1146.05 True False 1057.0756728094823 1034.9326225363914 941.0953715528864 734.5624764865549 924.1100562905241 963.7104933517567 728.9945615876172 710.7412813262962 777.5934201182536 909.1873752673785 861.4541556290955 1.2270829107992751 1.2013786407247748 1.092449743730856 0.8527006012875112 1.0727327162473002 1.11870200759318 0.8462372104470879 0.8250482938436371 0.9026521202981478 1.0554100520920058 1.0 9.75063021175436 -5.979253743252887 3.3563875360740556 0.9510032984611451 1.2127408391049839 0.5295057486349806 0.09366362081744718 0.1319936859700634 3.103780765481514 0.013070195855959433 0.04422075376098956 1.048929396396538e-06 5.979253743252887 0.2617375406438388 EQHNVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EQHNVSPR 8 0 P50443;C9JAN6 P50443 SLC26A2 Sulfate transporter 1 EQHNVS(1)PR;EQHNVS(1)PR 93.258 0.0025646 14280500.0 1096.79 1043.3700000000001 1060.34 1064.22 1211.5 968.9100000000001 985.9000000000001 1141.35 1024.3899999999999 1206.6100000000001 1459.6499999999999 True False 1208.1353133858768 1131.298451607334 1132.3010487423996 1129.9544523810177 1126.4084194481063 961.0195182010866 1023.4189640051811 1118.584878878246 981.3384507121839 1130.4244386786486 1280.1223034837096 0.9437655371663095 0.8837424740812905 0.8845256782582173 0.8826925750031642 0.8799225014537375 0.7507247671459043 0.7994696766239139 0.8738109443403512 0.7665974165449513 0.8830597167179456 1.0 10.32206593723132 -4.253704317362759 16.57996127373872 0.8742588908372703 0.8674287425105709 0.0 0.06971585428410552 0.0 0.0 0.01210430068831076 0.0 5.575652293422567e-05 4.253704317362759 -0.00683014832669937 EQILEEFSK ddPTM_A549_PD325901_60min_R1 1 EQILEEFSK 9 0 O60506-2;O60506;B7Z645;O60506-4;O60506-3;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 128.17 0.00014238 723500.0 1003.1 1102.2 1389.1 1104.1 1376.5 1261.5 1100.3 1168.9 1479.4 1258.0 1746.1 False True 1104.9339735568087 1195.0862621712358 1483.3726793368799 1172.2977494069664 1279.8193886672045 1251.2267622489915 1142.1725186072629 1145.5853725156899 1417.2259627520823 1178.5696653083762 1531.340769439869 0.721546761901317 0.780418236111073 0.9686757571794193 0.765536824201296 0.8357508754470988 0.8170792466438824 0.7458643702309607 0.748093040672273 0.9254804619813476 0.7696325264947208 1.0 10.580579646321532 -8.934162645478889 3.810692073138315 0.9690701895235478 0.8022977210578369 0.08618746383268172 0.08790172989498302 0.11909948707696248 3.2746459362812774 0.012025273100684984 0.01249686044835815 1.1636901399541634e-09 8.934162645478889 -0.16677246846571092 EQIS(ph)DIDDAVR ddPTM_A549_MK2206_60min_R1 2 EQISDIDDAVR 11 0 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 EQIS(1)DIDDAVR;EQIS(1)DIDDAVR 178.58 1.0104e-15 11239900.0 1844.29 1843.77 1788.74 1572.72 2508.3999999999996 2055.2 2041.21 2028.2200000000003 2055.43 2283.5 2413.9 True False 2155.5610634386308 1937.6100176215944 2042.4102290817996 1958.0364706020837 2139.417682857388 2272.6798998686527 2412.0714351497954 2315.726396163247 1589.8783868472408 1767.6557640403735 1814.4620097492027 1.1879890853909778 1.0678702597302732 1.1256285433962347 1.079127840694072 1.1790920236203244 1.2525365026423372 1.3293590178188384 1.2762606126337854 0.8762257783876092 0.9742037885294171 1.0 10.825326135405927 -8.765276587452709 24.99998016733002 0.941551053955474 1.1842401988864246 0.6327644397894295 0.08034472417388391 49.86002002584373 324844.60324873973 0.01627494796693932 0.017647624742422242 1.7168146577812827e-09 8.765276587452709 0.24268914493095062 EQIS(ph)DIDDAVR ddPTM_A549_PD325901_60min_R1 2 EQISDIDDAVR 11 0 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 EQIS(1)DIDDAVR;EQIS(1)DIDDAVR 175.21 2.4842e-15 15612600.0 2116.14 1780.4299999999998 1746.73 1867.91 2342.0 1429.52 2031.01 1940.6399999999999 2121.84 2270.4 1947.17 True False 2330.968974980068 1930.4730845196293 1865.2736017407756 1983.2865583685968 2177.5059994613844 1417.878463075846 2108.3011969613153 1901.932412797372 2032.6664436973613 2127.0465565311115 1707.6804341276168 1.364991322964278 1.1304650717660931 1.0922849289970735 1.1613920958119872 1.2751249917399106 0.8302949631206504 1.2345993751684337 1.1137519495964656 1.1903084459334257 1.2455764638526947 1.0 10.737822306907079 -14.483390553014297 0.31222286530815146 2.8377262223318027e-09 1.161081510997071 0.0 0.14766611879973934 44.57531229370073 0.795612432661206 27.852873935819275 0.04174158294252282 3.285560336045685e-15 14.483390553014297 1.1610815081593446 EQISDIDDAVR ddPTM_A549_MK2206_60min_R1 2 EQISDIDDAVR 11 0 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 0 ; 100.55 0.00073438 3063200.0 764.8299999999999 1017.0799999999999 861.99 821.38 1415.65 1050.18 829.16 879.62 1046.4 1650.98 1531.0 False True 893.9146057017978 1068.8450277000777 984.233143646489 1022.6181368731498 1207.4097603002153 1161.3093505469353 979.8076391791163 1004.3088287232715 809.3920707574333 1278.0224713445918 1150.810446549579 0.7767696308127721 0.9287759169242387 0.8552521804068334 0.888606929090032 1.0491821341388892 1.0091230523921944 0.8514066257539004 0.8726970038675297 0.7033235344571259 1.1105412495832192 1.0 10.168434507060534 -5.9177704252419145 0.0029344317911673408 1.7419099907015805 1.8635339524900572e-07 0.0 0.11840663501649071 545438.1479960569 289.4436684222071 84353.5362897173 87482.68293436008 1.2084524729013279e-06 5.9177704252419145 -1.7419098043481853 EQIVVDLSHPGVSEDDQVSR ddPTM_A549_MK2206_60min_R1 2 EQIVVDLSHPGVSEDDQVSR 20 0 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 118.16 3.233e-14 9954400.0 2562.1 2741.5 2346.06 2582.9 3743.8 2942.3999999999996 2992.0 2688.7 4278.7 3659.9 4315.2 False True 2994.5198426690595 2881.0306401067382 2678.7665854398338 3215.7106159507875 3193.09197938187 3253.762814992956 3535.607670924691 3069.8314587984123 3309.581281679885 2833.126048089058 3243.616746538693 0.9232039654082289 0.888215490680619 0.8258579218085433 0.9913966005331288 0.9844233239914244 1.0031280108740004 1.0900201679799517 0.9464223731346407 1.0203367229533462 0.8734466089781799 1.0 11.663387650908986 -6.3734350039750876 5.767859868795232 1.0083951808749911 0.880569909568705 0.40260486201669954 0.056002048031430315 0.0907777445209621 4.034598740043669 0.005091542572650564 0.011987388080141504 4.2321884343455695e-07 6.3734350039750876 -0.12782527130628618 EQIVVDLSHPGVSEDDQVSR ddPTM_A549_PD325901_60min_R1 2 EQIVVDLSHPGVSEDDQVSR 20 0 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 137.09 3.3824e-17 16619700.0 3417.3999999999996 3832.1000000000004 3035.0 4148.5 4130.8 3563.3 3894.0 4095.7 4333.8 4141.6 4409.5 False True 3764.3319322430857 4155.044515756118 3240.9733509376106 4404.743423072911 3840.6668584863696 3534.2816662083505 4042.188300878562 4014.008050485505 4151.665457195464 3880.098669190122 3867.159454123537 0.9734100641309716 1.074443545720777 0.8380759545567156 1.1390126203294126 0.9931493397281773 0.9139218871463289 1.0452603128553162 1.0379732457645066 1.07356976262475 1.003345922302942 1.0 11.917058536781418 EQLAIAEFAR ddPTM_A549_MK2206_60min_R1 2 EQLAIAEFAR 10 0 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 0 ; 80.763 0.0032297 2593100.0 1120.31 1003.33 881.3 1244.4 1291.1 1051.76 832.13 956.98 1570.53 1208.54 1499.38 False True 1309.3909390502208 1054.3952114310764 1006.281592008783 1549.2780558632394 1101.1809003098274 1163.0565450982156 983.3172497348136 1092.6348456283363 1214.807462621055 935.5299746325175 1127.0425652171832 1.161793688597643 0.9355416059444858 0.8928514530548105 1.37464023425299 0.9770535153635727 1.0319544097024342 0.8724756988617608 0.9694707896127982 1.0778718569399899 0.830075104086454 1.0 10.138326287721569 EQLAIAEFAR ddPTM_A549_PD325901_60min_R1 1 EQLAIAEFAR 10 0 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 0 87.184 0.0020221 2450200.0 1291.4 1279.4 1315.7 1677.8 1422.0 1411.8 1451.4 1019.4 1540.2 1561.3 1791.4 False True 1422.5019773215663 1387.2195280546914 1404.9913139468247 1781.4338954397333 1322.1236256336845 1400.3027688807977 1506.6338212365547 999.0672672961705 1475.4707501897767 1462.719251546875 1571.0691566202288 0.9054356209129149 0.8829780167277647 0.894289922264988 1.1338990953600367 0.841543874795372 0.8913056201123614 0.9589863150758487 0.635915524842598 0.9391507330994209 0.931034286672369 1.0 10.617530972434295 -9.307905031179388 2.8660907088277403 0.9788321937754706 0.8966808070331678 0.05261589508331865 0.11100718232288607 0.4233342205978848 7.059131735846926 0.021743429563363656 0.019808274269163536 4.921471435969501e-10 9.307905031179388 -0.08215138674230282 EQLDTS(ph)NESAEPK ddPTM_A549_MK2206_60min_R1 1 EQLDTSNESAEPK 13 0 Q96DX7 Q96DX7 TRIM44 Tripartite motif-containing protein 44 1 EQLDT(0.133)S(0.788)NES(0.079)AEPK 70.622 0.0026816999999999995 1220900.0 707.48 714.7 486.39 566.67 870.9 771.52 779.86 584.79 1033.7 830.52 1186.2 True False 826.8853277746794 751.0751772694829 555.3674157916166 705.504175438783 742.7917636742537 853.1617343064725 921.5504673286528 667.6857733442645 799.5686004797009 642.904955178809 891.6338025454672 0.9273822116367261 0.8423583483772007 0.622864918541821 0.7912487990301457 0.8330681963309443 0.9568521649480276 1.0335526364049663 0.7488340745249136 0.8967455004476778 0.7210414784000131 1.0 9.800307501123747 -7.111913209748851 3.5649341820123275 0.9403385518054641 0.7887139772677599 0.05674373851843051 0.11639175779210752 0.22378028801824404 5.221701727769527 0.014926229451383274 0.027008129524207086 7.728350145119027e-08 7.111913209748851 -0.15162457453770417 EQLQPHENGEGNS(ph)ET ddPTM_A549_MK2206_60min_R1 2 EQLQPHENGEGNSET 15 0 P06756-3;P06756-2;P06756 P06756-3 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain 1 EQLQPHENGEGNS(0.999)ET(0.001);EQLQPHENGEGNS(0.982)ET(0.018) 174.39 2.0920999999999998e-27 71190000.0 1129.06 1384.45 1302.54 1371.8400000000001 2112.91 1819.6100000000001 1571.9 1833.85 2099.44 1707.1599999999999 2152.8999999999996 True False 1319.6177251332604 1454.9125915359393 1487.259758147192 1707.9408615842387 1802.1037379549518 2012.1599224406366 1857.4938829968307 2093.8038534300863 1623.9201921167682 1321.511370325888 1618.2755129827494 0.8154468843818731 0.8990512306858643 0.9190398953796973 1.0554079622920458 1.1135951347576016 1.2433976206757853 1.1478230178328301 1.2938488141434332 1.0034880828936321 0.8166170468031887 1.0 10.660241533577203 -6.081500144536005 2.244815239319657 1.0615626799172986 0.8539396901919113 0.3529924750132204 0.12348682916381332 0.2893923215029561 2.807190161664478 0.017141058904767647 0.062281816595363124 8.28895640411245e-07 6.081500144536005 -0.20762298972538729 EQLQPHENGEGNS(ph)ET ddPTM_A549_PD325901_60min_R1 2 EQLQPHENGEGNSET 15 0 P06756-3;P06756-2;P06756 P06756-3 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain 1 EQLQPHENGEGNS(0.88)ET(0.12);EQLQPHENGEGNS(0.988)ET(0.012) 190.18 1.1342999999999999e-33 77005000.0 2298.7 2023.8 2486.7 2148.09 2684.5 2272.2 1991.18 2017.0 2041.8000000000002 1761.03 2373.7 True False 2532.0623317865 2194.3527285267173 2655.4624157418616 2280.772640633648 2495.9499810222383 2253.69595654551 2066.9554445155036 1976.7693526941114 1955.9902465507632 1649.8382652607404 2081.749948124058 1.2163143484491188 1.0540904446781083 1.2755914408139157 1.0956035534858242 1.1989672358447427 1.0825968597123776 0.9928932369510151 0.9495709868879553 0.9395894297071454 0.7925247058358141 1.0 11.023581072671947 -7.623123132028402 2.4961874781713402 0.9691170838723505 1.1637796218892271 0.6610861360703033 0.07811053182161475 0.10646353154549189 1.3489269501897778 0.008377168522364016 0.013069735736525975 2.3816441251842378e-08 7.623123132028402 0.1946625380168766 EQLRQEQALLEEIER ddPTM_A549_MK2206_60min_R1 2 EQLRQEQALLEEIER 15 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 54.7 0.015597999999999999 2288000.0 364.6 172.16 291.75 384.98 417.33 153.44 230.54199999999997 358.11 402.94 456.26 610.71 False True 426.13556638583145 180.92220864518563 333.1245370118717 479.30011728240885 355.94130983370815 169.67691895477122 272.42849721601596 408.87318916587924 311.67473336295893 353.1905491136678 459.05385226145887 0.9282910148483441 0.3941197917279202 0.7256763784265929 1.0441043353001176 0.7753802916154989 0.36962312399489455 0.5934565103286651 0.8906867618071992 0.6789502622133348 0.7693880519109652 1.0 8.842519597952515 -10.757679440203985 0.6844240023583842 1.0331063353996368 0.700413662057013 0.05111014347439169 0.2081982538643287 1.1519964265496019 0.8006170567472066 0.22732115326481653 0.03959161288164566 1.747111248239915e-11 10.757679440203985 -0.33269267334262376 EQLRQEQALLEEIER ddPTM_A549_PD325901_60min_R1 2 EQLRQEQALLEEIER 15 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 106.19 4.8404e-06 2634800.0 522.54 631.13 626.47 589.14 805.5799999999999 703.8499999999999 469.67 796.66 648.7 530.02 853.41 False True 575.5878761263834 684.3175400509278 668.9860214701429 625.5298397659818 748.9988399001286 698.1180789607239 487.5435488632853 780.7699913323205 621.4373949150167 496.5544467462212 748.4459802117167 0.76904398092106 0.9143178775004597 0.8938334083655622 0.8357715270099186 1.0007386768090538 0.9327568019848856 0.6514077992981824 1.0431881685188023 0.8303036041949582 0.6634472759219822 1.0 9.547754381952764 -10.940454279028422 1.0589075528744616 1.0040067956736112 0.8746676510590312 0.0 0.1427055254954532 0.7742854592457782 1.460176248085796 0.07839444268972193 0.01612908030559749 1.1469532622088469e-11 10.940454279028422 -0.12933914461457996 EQLSAQELMESGLQIQKS(ph)PEPEVLSTQEDLFDQSNK ddPTM_A549_MK2206_60min_R1 1 EQLSAQELMESGLQIQKSPEPEVLSTQEDLFDQSNK 36 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 EQLS(0.045)AQELMES(0.167)GLQIQKS(0.518)PEPEVLS(0.194)T(0.075)QEDLFDQSNK 40.864000000000004 0.017151 4135000.0 569.9 618.33 771.67 499.25 858.1 732.23 608.93 665.61 936.76 1117.0 758.38 True False 666.0851872827352 649.8003558990333 881.1044095148277 621.5662724121838 731.8746267181962 809.7140925850637 719.5646988824102 759.9622558451339 724.5853556983308 864.6689242098081 570.0533157767926 1.1684612102906256 1.1398940027452908 1.5456526348139492 1.0903651556963514 1.2838704845017788 1.420418178748234 1.2622761397359534 1.33314241810796 1.2710834857805582 1.5168211468633468 1.0 9.154953047314677 -10.477063551623209 0.7502823874239327 0.9944124331855043 1.2836681406184933 0.0 0.1944902772961678 0.5117645755976267 0.5066961510085222 0.08501741742857119 0.022972181747283542 3.333776250389435e-11 10.477063551623209 0.289255707432989 EQLVDQGIMPPLKS(ph)PAAFHEQIK ddPTM_A549_MK2206_60min_R1 2 EQLVDQGIMPPLKSPAAFHEQIK 23 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 1 EQLVDQGIMPPLKS(1)PAAFHEQIK;EQLVDQGIMPPLKS(1)PAAFHEQIK 117.03 1.3547000000000001e-15 15777900.0 3293.2 3083.6 3188.5 3207.3 4363.1 3151.4 3151.8 2863.7 4802.5 3976.7000000000003 3902.7 True False 3849.0116489901807 3240.5420688794957 3640.677245115176 3993.08864398117 3721.293769763622 3484.8790562699837 3724.441262439986 3269.638244713435 3714.741418016603 3078.3607080619013 2933.5518809595314 1.3120653068972528 1.1046479490996939 1.2410475058393553 1.3611788050856208 1.268528364511634 1.1879384437987575 1.2696012934401433 1.1145663609821599 1.2662947746475692 1.0493629678214536 1.0 11.518432791497057 -11.018830804160189 0.5776492026914041 0.9363924353917494 1.2407711102942895 0.5465020512304245 0.07414039033132527 0.8469973832215948 0.33173378247988455 0.14499721665850956 0.015309661579698085 9.575670550952608e-12 11.018830804160189 0.3043786749025401 EQLVDQGIMPPLKS(ph)PAAFHEQIK ddPTM_A549_PD325901_60min_R1 1 EQLVDQGIMPPLKSPAAFHEQIK 23 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 1 EQLVDQGIMPPLKS(1)PAAFHEQIK 88.595 5.0639e-07 4123900.0 1554.9 1374.8 2046.8 1428.9 1599.5 1502.1 1587.7 2168.2 2269.6 3005.5 3056.6 True False 1712.7523033431194 1490.659220861019 2185.7081564082696 1517.1599077326457 1487.156637975441 1489.867395619668 1648.1207923227764 2124.9535500800057 2174.216604746604 2815.73221707816 2680.6575773838317 0.6389299095092434 0.5560796848644194 0.8153626837118807 0.5659655752128203 0.5547730715486686 0.5557843001617884 0.6148195898751261 0.7926986154471243 0.8110758431401428 1.0503886213718328 1.0 11.3883712283537 -9.061906478484566 0.6896152597756151 0.9663166765322482 0.6094533761232749 0.767348654279572 0.08387362791294913 0.2136546892221875 0.22138856354918804 0.0264520212354773 0.021994307425061237 8.671485885126716e-10 9.061906478484566 -0.3568633004089733 EQMMNSSISSGS(ph)GSLR ddPTM_A549_MK2206_60min_R1 1 EQMMNSSISSGSGSLR 16 0 A0A590UK02;A0A590UJD9;A0A0C4DFT3;A0A590UK70;Q12959-9;A0A590UJ81;A0A590UJX2;A0A590UJS9;A0A590UJ68;Q12959-8;Q12959-5;Q12959-3;Q12959-6;A0A590UJ18;Q12959;A0A590UJR5;A0A590UJR4;Q12959-7;A0A590UJ29;E7EQD7;A0A590UKA8;A0A590UK81;A0A590UJ64;A0A590UK48;C9JUA9;A0A590UJ25;A0A590UJL2;A0A590UJ08;A0A590UJC5;Q12959-4;Q12959-2 A0A590UK02;A0A590UJ25 DLG1 Disks large homolog 1 1 EQMMNS(0.001)S(0.001)IS(0.104)S(0.083)GS(0.499)GS(0.312)LR 45.33 0.011913 3142300.0 657.06 662.89 505.32 472.18 819.15 688.82 667.01 619.86 713.81 857.59 1019.4 True False 767.9556644253269 696.6282695678854 576.9819744398939 587.8641211969656 698.6541201214435 761.71047519829 788.1970830827124 707.7270532416356 552.1331747203396 663.8598233778777 766.254845991274 1.0022196511290609 0.9091339170151472 0.7529896580209875 0.7671913910527622 0.9117777509356197 0.9940693741556634 1.0286356911231702 0.9236183718043267 0.7205607607036618 0.8663694942366963 1.0 9.58168048257876 -5.321201627583624 4.2921019977331065 0.8776728706472436 1.005644795140351 0.09830053619357504 0.09883031396333003 0.4082698631815127 13.997415085412047 0.017048255806987263 0.13290111850869962 4.773076251435787e-06 5.321201627583624 0.12797192449310746 EQMMNSSISSGSGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 EQMMNSSISSGSGSLR 16 0 A0A590UK02;A0A590UJD9;A0A0C4DFT3;A0A590UK70;Q12959-9;A0A590UJ81;A0A590UJX2;A0A590UJS9;A0A590UJ68;Q12959-8;Q12959-5;Q12959-3;Q12959-6;A0A590UJ18;Q12959;A0A590UJR5;A0A590UJR4;Q12959-7;A0A590UJ29;E7EQD7;A0A590UKA8;A0A590UK81;A0A590UJ64;A0A590UK48;C9JUA9;A0A590UJ25;A0A590UJL2;A0A590UJ08;A0A590UJC5;Q12959-4;Q12959-2 A0A590UK02;A0A590UJ25 DLG1 Disks large homolog 1 1 EQMMNSSISS(0.002)GS(0.287)GS(0.711)LR;EQMMNSSIS(0.003)S(0.013)GS(0.279)GS(0.705)LR 118.21 4.7457e-08 13204300.0 4481.8 4795.2 4308.0 4528.299999999999 5234.9 5070.6 4976.7 5029.700000000001 5174.8 4892.6 5361.2 True False 4936.789036673219 5199.3083327558625 4600.366786108474 4808.002806484527 4867.21868342459 5029.306714752072 5166.091041854735 4929.378687776685 4957.321151851746 4583.680401023662 4701.8063874469 1.0499771002595273 1.1058108106359326 0.9784253980322852 1.0225863020053645 1.0351805843003905 1.0696541499836207 1.098746017200411 1.0484010360225313 1.0543439570559587 0.9748764673214498 1.0 12.198999417098113 -10.59965567537217 0.8763155238291449 0.9998961713640921 1.0513344601372707 0.32625262285112744 0.03411012424724225 0.7068622769033 0.9660414282193579 0.023037531811446813 0.006256970327549167 2.513878737079534e-11 10.59965567537217 0.051438288773178575 EQPGEEYS(ph)EEEESVLK ddPTM_A549_MK2206_60min_R1 1 EQPGEEYSEEEESVLK 16 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 EQPGEEYS(1)EEEESVLK 193.9 1.9957999999999997e-35 4640100.0 2146.1 1924.1 1808.2 1820.0 3148.1 0.0 517.05 1974.4 2981.6 2709.8 2946.7 True False 2508.3092128925746 2022.0284715044224 2064.6299496996276 2265.9000817029037 2685.0186602628546 0.0 610.991292196394 2254.277246346409 2306.2723606368168 2097.654297962166 2214.953065217271 1.1324435051387995 0.9128990149983498 0.9321325955487467 1.0230013977657963 1.2122237271874081 0.0 0.2758484149353567 1.0177539568429999 1.041228546488676 0.9470423237868477 1.0 11.113060413105723 EQPGEEYS(ph)EEEESVLK ddPTM_A549_PD325901_60min_R1 2 EQPGEEYSEEEESVLK 16 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 EQPGEEYS(0.999)EEEES(0.001)VLK;EQPGEEY(0.138)S(0.861)EEEES(0.001)VLK 100.41 1.3047e-06 12909000.0 1521.6 1359.27 1325.1100000000001 1379.7600000000002 1920.42 1851.0900000000001 604.99 1635.5700000000002 1430.4 1306.98 1698.82 True False 1676.0717118572825 1473.8204532584793 1415.0399331337517 1464.9846415376835 1785.5363242893386 1836.0153367669343 628.013225513231 1602.9472732701563 1370.2852623499907 1224.4570597493973 1489.8759097072557 1.124974033700976 0.989223628394709 0.9497703291355262 0.9832930595042221 1.1984463354670771 1.2323276890406873 0.4215204913519467 1.0758931417215263 0.9197311356079559 0.8218517070928342 1.0 10.540976459708489 EQPPAETPTAPAPPVT(ph)PSKPMAGTTDREEATR ddPTM_A549_PD325901_60min_R1 1 EQPPAETPTAPAPPVTPSKPMAGTTDREEATR 32 2 Q3KQU3-3 Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTAPAPPVT(0.311)PS(0.218)KPMAGT(0.218)T(0.218)DREEAT(0.036)R 74.39699999999999 9.8063e-06 9288200.0 1577.7 1206.5 1679.1 1958.0 1787.7 1531.1 1536.0 1580.6 1579.0 2015.6 1827.3 True False 1737.8669425586454 1308.1759892121177 1793.0538232485474 2078.9412130593614 1662.1381192301951 1518.6312292345863 1594.453320531451 1549.073693043288 1512.640121120412 1888.334672015551 1602.553684209079 1.0844360221332296 0.8163071241246761 1.1188728595594521 1.2972677505561367 1.0371809291683876 0.9476320476490548 0.9949453402045463 0.9666282685611338 0.943893571881779 1.1783284957143358 1.0 10.646156971393744 -7.00854631889473 24.97836652666244 0.9732817524766718 1.076267474095245 0.04103657120461279 0.1217656593854469 574.0606142407083 1677817.4964809623 0.015591184193796525 0.028470983243582448 9.80513733821195e-08 7.00854631889473 0.10298572161857311 EQPPAETPTDAAVLT(ph)SPPAPAPPVTPSKPMAGTTDREEATR ddPTM_A549_MK2206_60min_R1 1 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTDAAVLT(0.5)S(0.5)PPAPAPPVTPSKPMAGTTDREEATR 84.537 2.5445999999999996e-07 7532700.0 1206.6 1888.1 1682.4 1333.6 2914.6 1329.9 1405.9 1260.3 2851.4 2861.5 3506.3 True False 1410.2445814622718 1984.196225272855 1920.9896180592048 1660.3320598675784 2485.8662009472737 1470.6291352838261 1661.3338317356347 1438.9513845068766 2205.562452750139 2215.0851626019403 2635.5889410429695 0.5350775910086351 0.7528473785778058 0.7288654115004066 0.629966241704802 0.9431919227751628 0.55798880940131 0.6303463358281518 0.5459695789804941 0.8368385594596334 0.8404516835335387 1.0 11.363909662988888 -9.222644145678737 1.6308757113206263 0.949738637052123 0.6756458988504577 0.38971179275793977 0.12097903660625224 0.1924697538909791 1.058014903403169 0.024912635124560364 0.022503260430099807 5.989021253977379e-10 9.222644145678737 -0.27409273820166535 EQPPAETPTDAAVLT(ph)SPPAPAPPVTPSKPMAGTTDREEATR ddPTM_A549_PD325901_60min_R1 1 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTDAAVLT(0.5)S(0.5)PPAPAPPVTPSKPMAGTTDREEATR 72.885 5.1953e-06 7139700.0 607.3 439.73 535.05 697.25 871.16 981.23 879.71 1046.8 697.87 748.8 1110.6 True False 668.9526489293689 476.787590332569 571.3617105170238 740.3175489303574 809.9727269388468 973.2391882057692 913.1878454457833 1025.920752801286 668.540950808297 701.5206402089921 974.0032406734549 0.6868074160275228 0.48951335110846633 0.5866117140657224 0.7600770901116096 0.8315914086474778 0.9992155544912177 0.9375614036092713 1.0533032231924955 0.6863847294245632 0.7202446674858491 1.0 9.927782762180643 -6.474588750120304 2.2454990154336283 0.8814737844131942 0.5746826778149248 0.5682922484480957 0.11537336114875361 0.20309281548284602 2.0103743000796146 0.019760504931071364 0.05240494103264525 3.352827808357989e-07 6.474588750120304 -0.30679110659826947 EQPPAETPTDAAVLTS(ph)PPAPAPPVTPSKPMAGTTDREEATR ddPTM_A549_PD325901_60min_R1 1 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTDAAVLT(0.466)S(0.532)PPAPAPPVTPSKPMAGTTDREEATR 79.359 9.366799999999999e-07 11111000.0 763.49 1054.8 1126.7 733.15 1415.9 979.67 1017.6 851.14 666.06 1068.5 1092.7 True False 840.9989427483686 1143.6916978209213 1203.1646373974975 778.4350103955416 1316.4520685898267 971.6918923285532 1056.3253248520864 834.163344993587 638.0678144860425 1001.0347276486492 958.3048271960057 0.8775902185624239 1.1934529237083742 1.2555134892912416 0.8123041732694155 1.373729977382831 1.0139695269737061 1.1022853009546953 0.8704572087300698 0.6658296988370863 1.0445890485365403 1.0 9.904340825624425 -8.2899747749299 5.080167966390088 0.8389651312792652 1.098074933815762 0.19517973908114583 0.17731051135859638 0.17897894929536196 12.90803894414308 0.02945139839383269 0.03631674429832663 5.128911733177708e-09 8.2899747749299 0.25910980253649685 EQPPAETPTDAAVLTSPPAPAPPVT(ph)PSKPMAGTTDREEATR ddPTM_A549_MK2206_60min_R1 2 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTDAAVLTSPPAPAPPVT(0.484)PS(0.122)KPMAGT(0.122)T(0.122)DREEAT(0.151)R;EQPPAETPTDAAVLT(0.005)S(0.005)PPAPAPPVT(0.483)PS(0.126)KPMAGT(0.126)T(0.126)DREEAT(0.127)R 83.484 5.4476e-07 54887000.0 1457.15 1457.52 1411.01 1257.47 2466.5 1471.77 1263.99 1453.0500000000002 2421.1 2298.1 2087.09 True False 1703.0812961028907 1531.7015424287342 1611.1124351983588 1565.5502064499728 2103.6811173527917 1627.5117245181414 1493.640621648429 1659.0242872789954 1872.7247157022396 1778.957613900232 1568.8079522463488 1.085589407973282 0.9763473854371515 1.0269660049156653 0.9979234260052601 1.3409424106631838 1.0374193489953538 0.9520863401474419 1.0575062963592627 1.1937246448940533 1.1339549951623928 1.0 10.615453038306631 EQPPAETPTDAAVLTSPPAPAPPVT(ph)PSKPMAGTTDREEATR ddPTM_A549_PD325901_60min_R1 3 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTDAAVLTSPPAPAPPVT(0.775)PS(0.072)KPMAGT(0.043)T(0.043)DREEAT(0.066)R;EQPPAETPTDAAVLTSPPAPAPPVT(0.634)PS(0.135)KPMAGT(0.093)T(0.093)DREEAT(0.044)R;EQPPAETPTDAAVLT(0.03)S(0.03)PPAPAPPVT(0.463)PS(0.122)KPMAGT(0.122)T(0.122)DREEAT(0.111)R 142.13 3.2366e-40 141514500.0 2807.02 2893.52 3733.8599999999997 3109.8099999999995 4043.49 4313.54 3606.4500000000003 4110.02 3771.05 3917.71 3902.69 True False 3091.986603981093 3137.367085209323 3987.262193124185 3301.8959008090565 3759.4892116832225 4278.411960389627 3743.6954282751653 4028.0424268516863 3612.5658826796257 3670.345121999427 3422.6838711902424 0.903380715352438 0.9166394570113482 1.1649519333895157 0.9647095744372145 1.0984038705204333 1.2500166890674025 1.0937894264167876 1.1768666281910896 1.0554775195827102 1.072358786300372 1.0 11.740912331749021 -5.674417707481766 9.213366336701089 1.0637656472716412 0.9079166183799201 0.3902993798711004 0.08196525100271602 0.27029757654698766 26.002186877091674 0.012186966608877813 0.04737097877718247 2.1163246601411636e-06 5.674417707481766 -0.15584902889172114 EQQDVGS(ph)PDKAR ddPTM_A549_MK2206_60min_R1 2 EQQDVGSPDKAR 12 1 F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;H0Y7R3;A6PVV2;Q9Y3S1-3 F8W9F9 WNK2 Serine/threonine-protein kinase WNK2 1 EQQDVGS(1)PDKAR;EQQDVGS(1)PDKAR 61.961999999999996 0.0021896999999999997 49169000.0 4471.1 4857.6 4463.1 4425.4 5346.1 4138.4 3392.0 3528.6000000000004 5777.700000000001 6193.7 6215.5 True False 5225.712372100082 5104.8310915128595 5096.034691131737 5509.623198663754 4559.695771935848 4576.322741152408 4008.2824932408234 4028.7898558842885 4469.060175091002 4794.538868288534 4672.019810926781 1.1185124600452978 1.0926390079883292 1.0907562247945273 1.1792807868190136 0.9759581415454974 0.9795169811672116 0.8579335395510035 0.8623229393124306 0.9565584813315424 1.0262240021061573 1.0 12.18983067640254 -6.8399568381903215 7.052532663087575 0.9600243605658646 1.1158714685917512 0.6952128004196998 0.0536656661922978 0.10908652938391024 8.152958369982683 0.008303367906495811 0.01580415976346108 1.445583431094275e-07 6.8399568381903215 0.15584710802588664 EQQIEEHRR ddPTM_A549_MK2206_60min_R1 2 EQQIEEHRR 9 1 Q16643;Q16643-3;Q16643-2;D6R9W4 Q16643 DBN1 Drebrin 0 ; 57.55 0.0041654 6294700.0 216.93 147.19 281.88 197.58499999999998 456.49 115.55 0.0 125.94 259.389 445.89 449.40999999999997 False True 253.54248057070325 154.68134230067886 321.85482259779377 245.9933338699277 389.3409257086463 127.77742430411766 0.0 143.79238067507433 200.63780565911696 345.1631393159457 337.8090939149879 0.7505496007591467 0.45789573189999894 0.9527713385915859 0.7282022251651807 1.1525472011319706 0.37825335849683717 0.0 0.42566166294877994 0.5939384382280986 1.021769826607476 1.0 8.400064356189512 -10.50245334473916 0.9998838759008974 0.9824059757018493 0.6052998833869354 0.22003859450349028 0.291581668214095 0.683332628314035 1.296919027882608 0.16329296555992492 0.055944165996488 3.144464204697537e-11 10.50245334473916 -0.3771060923149139 EQQPSS(ph)ASER ddPTM_A549_PD325901_60min_R1 1 EQQPSSASER 10 0 P12270 P12270 TPR Nucleoprotein TPR 1 EQQPS(0.403)S(0.57)AS(0.026)ER 56.205 0.015653999999999998 2179800.0 179.3 254.47 264.91 272.36 143.75 192.83 277.8 241.42 330.79 300.51 132.77 True False 197.50240400631637 275.91507996254285 282.8883856332395 289.18305862556053 133.65349591057807 191.25965641258276 288.37183101799286 236.60468870967387 316.8880466532116 281.53574731464255 116.44013169837442 1.6961712523473007 2.369587494776037 2.429474971447399 2.4835342798706037 1.147830167839324 1.6425578846648872 2.4765673725360338 2.0319857531814955 2.72146760769797 2.417858372437524 1.0 6.863444566093869 -10.993789360846629 1.2731006513384944 1.0007081596079697 2.1689637062177054 0.0 0.6047561456596303 0.3358060469667868 0.9695591758935966 0.3378270397115656 0.07743281172560168 1.0144032668111704e-11 10.993789360846629 1.1682555466097357 EQQSWVISPPQPS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 EQQSWVISPPQPSPQK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EQQSWVIS(0.005)PPQPS(0.995)PQK 54.236999999999995 0.014325 2541300.0 647.06 1206.5 858.93 830.22 1425.3 938.65 1137.2 970.56 1021.8 1351.2 1291.0 True False 756.2679089018541 1267.905696621842 980.7391896336134 1033.6239372699924 1215.6402580834924 1037.9773199745566 1343.814519844772 1108.139852215341 790.3639314793055 1045.9629815508447 970.4090702126102 0.7793289779702499 1.3065682664570029 1.010645118371307 1.0651424940242287 1.2527090846514384 1.0696286255312335 1.3847917966701928 1.1419306416546116 0.8144646992078732 1.0778577959104207 1.0 9.922449224867936 -8.745804495668336 24.5359423551108 0.912386113383322 1.1373907298615926 0.13823679874813677 0.1656604264279663 170.9525661883046 268276.7851335931 0.026000867096614182 0.029429751439143184 1.795541735618868e-09 8.745804495668336 0.22500461647827064 EQQSWVISPPQPS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 EQQSWVISPPQPSPQK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EQQSWVIS(0.014)PPQPS(0.986)PQK 79.013 0.00034891 3678900.0 1683.8 1754.8 1846.7 1464.4 1931.7 2159.9 1822.8 1671.3 1791.3 2148.9 1905.0 True False 1854.738136451955 1902.6831544711358 1972.0281671092198 1554.8526621062977 1796.024056003225 2142.3104905125633 1892.1676514744322 1637.9646103905131 1716.0178904135494 2013.218087266431 1670.6970767899625 1.110158246051166 1.138855858972894 1.1803624933002383 0.9306610298820625 1.075014783322697 1.2822854126426961 1.1325617778119286 0.9804078986824226 1.0271268886820974 1.2050168251533546 1.0 10.70623445885696 -8.255271867394418 24.660099638331836 1.0107376919519926 1.1214184027782048 0.04167620642004155 0.09885595001792254 396.04296919076927 1583534.0761604134 0.013069721130083789 0.016647847027490892 5.55556371322254e-09 8.255271867394418 0.11068071082621223 EQS(ph)DDETEESVK ddPTM_A549_MK2206_60min_R1 2 EQSDDETEESVK 12 0 O94885;A0A1B0GVI0;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 EQS(0.996)DDET(0.004)EESVK;EQS(1)DDETEESVK 138.21 1.6802999999999998e-08 5224900.0 2560.7 2585.6000000000004 2685.2 2413.3 3536.7 2798.0 2565.8 2964.0 3380.1000000000004 3787.5 4427.1 True False 2992.883556895773 2717.1959960094778 3066.0017370497953 3004.558608337154 3016.45611503816 3094.0825028379186 3031.9726477468485 3384.156076869305 2614.512746910553 2931.901119467008 3327.7288882558078 0.8993772201390059 0.8165316608570435 0.921349617112831 0.902885634385907 0.9064608976061155 0.9297880346435456 0.9111236971398903 1.0169566663957028 0.785674805461968 0.8810516775613086 1.0 11.700322185839024 -5.784287766489226 24.864984304674348 0.9095842546873116 0.8579543953798933 0.11576749628618821 0.060231986785130205 448.9126114110062 488534.3303288088 0.010983732482507657 0.034183579578380814 1.6432825121819614e-06 5.784287766489226 -0.05162985930741837 EQS(ph)DDETEESVK ddPTM_A549_PD325901_60min_R1 2 EQSDDETEESVK 12 0 O94885;A0A1B0GVI0;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 EQS(0.988)DDET(0.012)EESVK;EQS(0.999)DDET(0.001)EESVK 129.38 8.0114e-08 7126000.0 3524.8 3646.3 3466.8999999999996 4517.1 4141.4 3485.3999999999996 3984.8999999999996 3704.7 4446.9 4200.299999999999 4613.7 True False 3882.6351011793863 3953.5864976909634 3702.1846821632935 4796.111007921577 3850.522351054385 3457.0160579806848 4136.547550120949 3630.806852219072 4260.012257511311 3935.0923411723147 4046.244148653987 0.9595652062841966 0.9771003311814868 0.9149681893008984 1.1853241751408004 0.9516287721627698 0.8543765356153031 1.0223178330692186 0.8973276744624732 1.05283124324775 0.9725296340512107 1.0 11.982367658790949 EQS(ph)EGVGAR ddPTM_A549_MK2206_60min_R1 2 EQSEGVGAR 9 0 O00625 O00625 PIR Pirin 1 EQS(1)EGVGAR;EQS(1)EGVGAR 49.978 0.029098000000000002 3699700.0 630.98 901.29 820.6800000000001 956.03 877.78 820.36 724.96 762.6600000000001 1335.1799999999998 1565.9499999999998 1482.3899999999999 True False 737.4739980201093 947.1618112791554 937.0647644726744 1190.2573929178172 748.6597247881349 907.1699506891039 856.6758479657628 870.7693905482946 1032.7638618443327 1212.2008074004912 1114.2716511173282 0.6618439922442722 0.8500277381457164 0.840966171519341 1.068193193037169 0.6718825916798848 0.8141371538793484 0.7688213615654109 0.7814695722314542 0.9268510607882161 1.0878862494482069 1.0 10.121885278510234 -8.956348546875532 2.746879098087758 0.9713267538125007 0.8129526672461659 0.390197156422438 0.10816146343802457 0.22163138472708827 3.2964465471752895 0.01881017240252317 0.019235135899550303 1.1057360095707424e-09 8.956348546875532 -0.15837408656633478 EQS(ph)EGVGAR ddPTM_A549_PD325901_60min_R1 2 EQSEGVGAR 9 0 O00625 O00625 PIR Pirin 1 EQS(1)EGVGAR;EQS(1)EGVGAR 50.354 0.028312999999999998 4681200.0 1043.56 1053.73 682.19 1359.62 1133.8600000000001 967.76 1128.5900000000001 814.84 1039.26 1291.17 1315.05 True False 1149.501442971732 1142.531525165756 728.4875157417227 1443.6006394789424 1054.2215852046475 959.8788834198052 1171.539110038145 798.587376970386 995.5835163240016 1209.6453058475497 1153.3071867887868 0.9967001473149134 0.9906567289734541 0.6316508941300266 1.2517052317157884 0.9140856809710616 0.8322837960391506 1.0158083843213725 0.6924324985730249 0.8632422720750198 1.048849187540076 1.0 10.171561114937838 EQS(ph)NDIAR ddPTM_A549_MK2206_60min_R1 2 EQSNDIAR 8 0 P45973 P45973 CBX5 Chromobox protein homolog 5 1 EQS(1)NDIAR;EQS(1)NDIAR 66.595 0.0084054 19177700.0 767.3399999999999 1000.1800000000001 912.13 672.3399999999999 1131.6399999999999 670.95 802.36 918.0 1071.89 1050.81 1394.8400000000001 True False 896.8482323381886 1051.0848898858146 1041.4837495960185 837.0633301824892 965.1772550744431 741.949483659436 948.1384260839346 1048.1293112570918 829.1086264566 813.4312911807598 1048.462732374405 0.855393524867725 1.002500954426364 0.9933436043429206 0.7983720396878872 0.9205641986803392 0.7076546077886596 0.9043129496236165 0.9996819904923485 0.7907850234971691 0.7758323362992784 1.0 10.034059866388272 -3.56852467919244 17.337672975442064 0.8986186711699814 0.9569875645558785 0.0 0.10262907375267677 0.0 0.0 0.013648150297312811 0.0 0.00027006936345079496 3.56852467919244 0.058368893385897125 EQS(ph)NDIAR ddPTM_A549_PD325901_60min_R1 2 EQSNDIAR 8 0 P45973 P45973 CBX5 Chromobox protein homolog 5 1 EQS(1)NDIAR;EQS(1)NDIAR 77.744 0.0044099 26817000.0 1091.64 1018.3599999999999 1045.18 811.26 1220.32 1045.76 822.45 1215.87 555.8 1107.02 1438.0700000000002 True False 1202.4624891771057 1104.1807711347305 1116.1121999779143 861.369687694861 1134.6089330754548 1037.2436772806223 853.7487848119088 1191.618519018437 532.441658846564 1037.1225682747847 1261.1965066768194 0.9534299237360921 0.8755025606946721 0.8849629649853742 0.6829781744040196 0.8996289849113874 0.8224282828166881 0.6769355768844365 0.9448317630995375 0.42217184715292094 0.8223322557462067 1.0 10.300577363754893 -7.5946333136828255 6.653560300074532 0.7367485639417819 0.8527374371405237 0.042027235714856226 0.1552722362434593 0.5259818824557714 39.18285800746575 0.033195350436638904 0.049395678239139366 2.5431190219759183e-08 7.5946333136828255 0.11598887319874185 EQS(ph)PEKPR ddPTM_A549_MK2206_60min_R1 3 EQSPEKPR 8 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 EQS(1)PEKPR;EQS(1)PEKPR;EQS(1)PEKPR 92.611 0.00071963 35741000.0 9680.3 9073.61 7343.400000000001 6152.02 5643.890000000001 3721.54 3490.55 4094.6899999999996 4932.34 10685.899999999998 9941.9 True False 11314.097979387721 9535.417992478173 8384.804541878248 7659.265176174668 4813.681257415877 4115.350892641678 4124.737752588964 4675.124846962203 3815.1728653284777 8271.947768320137 7473.051847518781 1.513986281674769 1.2759737503553041 1.1220054019379229 1.024917976277351 0.6441386137330394 0.5506921371096958 0.5519482316931159 0.6255978069407412 0.5105240727849626 1.106903569933963 1.0 12.867481816315498 -6.120297480716079 1.271184713872604 0.713942722537706 1.454528531419374 0.66705223231154 0.18831184777261395 0.2662802739558973 0.7404490434918591 0.03147672266259389 0.16885116104409778 7.580581465288918e-07 6.120297480716079 0.7405858088816681 EQS(ph)PEKPR ddPTM_A549_PD325901_60min_R1 2 EQSPEKPR 8 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 EQS(1)PEKPR;EQS(1)PEKPR 90.685 0.00073309 58806000.0 11337.2 12136.3 10225.2 10948.3 13450.6 9883.3 8345.4 9473.6 10568.9 11694.1 13416.3 True False 12488.144197994472 13159.068593348553 10919.143561122652 11624.551625606646 12505.87625805094 9802.813681597676 8662.988763778105 9284.641616104569 10124.72588733978 10955.732530272413 11766.180152932897 1.0613592547179906 1.1183806827969107 0.9280109108648052 0.9879630835593701 1.0628662909715574 0.8331347603201688 0.7362617817490008 0.789095653425826 0.8604938693562363 0.9311205835601227 1.0 13.522358410302491 -6.212896299689516 0.9525824311487242 0.9040991175944295 1.0907490442197847 0.3913759334363479 0.09101016861563052 0.7942021134503938 1.1365504713918888 0.017009345711776803 0.10783533427914753 6.124966254678532e-07 6.212896299689516 0.18664992662535518 EQS(ph)TPPKS(ph)PQ ddPTM_A549_PD325901_60min_R1 2 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 2 EQS(0.671)T(0.33)PPKS(1)PQ;EQS(0.761)T(0.244)PPKS(0.995)PQ 71.208 0.0086447 95602600.0 6131.299999999999 6111.9 5950.5 5772.9 7189.900000000001 6770.2 5999.9 7116.7 6416.3 7824.299999999999 6797.299999999999 True False 6753.745062375504 6626.9712627149165 6354.336713263343 6129.47892179284 6684.9062278084575 6715.065735852653 6228.229477771259 6974.7518355568545 6146.645224284293 7330.272362696611 5961.275191634856 1.1329363005842574 1.1116700789143565 1.0659358122201856 1.0282160653133436 1.1213886312762469 1.1264478689518564 1.044781406251972 1.170010041701171 1.031095701287127 1.2296483767403987 1.0 12.541405258951023 -8.95533418173929 12.83138382673355 1.0137051913720942 1.0970055560194656 0.0 0.07600307842223726 0.6532857916804995 186.9402444560874 0.006713344968491209 0.007116814207682863 1.1083216536161502e-09 8.95533418173929 0.08330036464737134 EQS(ph)TPPKSPQ ddPTM_A549_MK2206_60min_R1 1 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EQS(0.5)T(0.5)PPKSPQ 164.81 3.0891e-09 27928000.0 3940.1 4651.8 4871.4 4860.3 4685.3 3982.0 4017.3 3681.3 6628.2 8361.7 8243.8 True False 4605.092553803659 4888.55675055573 5562.237770692824 6051.0737181871555 3996.098576579382 4403.372596962324 4747.191409226521 4203.135548508427 5126.923283060421 6472.786162547137 6196.636942694589 0.7431599747396445 0.7889048197859976 0.8976220201589059 0.9765093185459182 0.6448818308276894 0.7106068400785686 0.7660915837296446 0.6782930139974774 0.8273719003506753 1.0445643697389935 1.0 12.597269728795753 -10.06451730957149 0.8643754953204189 0.9855359846919454 0.7820760812366324 0.4887829256117363 0.09287162048071831 0.3979419825842398 0.5963872169244792 0.041905529652390076 0.019155385229511705 8.619512234369703e-11 10.06451730957149 -0.20345990345531295 EQS(ph)TPPKSPQ ddPTM_A549_PD325901_60min_R1 1 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EQS(0.5)T(0.5)PPKSPQ 124.12 1.9815999999999998e-05 47865000.0 11040.0 11795.0 12384.0 11990.0 14278.0 12011.0 12549.0 11499.0 12046.0 9692.9 9659.3 True False 12160.772672781555 12789.006044556094 13224.45271104163 12730.595068734301 13275.16253642597 11913.186398234358 13026.559062076281 11269.643424209007 11539.7485110934 9080.888639799336 8471.267335347648 1.4355316850926056 1.5096921792554021 1.5610949563426708 1.5027969918519704 1.5670810530359893 1.4063050930437269 1.5377343845260305 1.330337360170976 1.362222210004169 1.0719634123583788 1.0 13.048362103292527 -10.191242751707806 0.3705738045633964 0.9007574135373185 1.5303029224125702 0.8965748693718906 0.05893557061279275 0.34490650942713097 0.07967511148895705 0.08561938939415854 0.02064659370429893 6.438093035514102e-11 10.191242751707806 0.6295455088752516 EQSEASRS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 EQSEASRSPSR 11 1 Q6UXY1-2;Q6UXY1 Q6UXY1-2 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 EQSEAS(0.002)RS(0.771)PS(0.227)R 121.13 3.02e-06 36595000.0 823.12 1251.8 631.8 607.78 1097.5 961.36 436.41 708.44 1013.8 1193.8 1489.6 True False 962.0425326481228 1315.511273129898 721.3987403054003 756.686127284281 936.0592038494583 1063.0904771008786 515.7000480174614 808.8635395065077 784.1759187059314 924.1197508698921 1119.6912091314514 0.8592034346633682 1.1748875604286872 0.6442836510835804 0.6757989355576394 0.8359976359692624 0.9494496950864889 0.46057345437005964 0.722398758613052 0.7003501611075607 0.8253344701944523 1.0 10.128885202232176 -4.396322594300713 16.607792580178085 0.8240804701229915 0.8136262183135987 0.0 0.18664696186821841 0.0 0.0 0.025902763433606202 0.0 4.0149247111921255e-05 4.396322594300713 -0.010454251809392745 EQSEASRS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 EQSEASRSPSR 11 1 Q6UXY1-2;Q6UXY1 Q6UXY1-2 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 EQS(0.035)EAS(0.104)RS(0.724)PS(0.137)R 45.257 0.039201 10044000.0 337.24 428.2 203.95 300.98 332.9 324.84 205.3 199.03 141.88 364.05 320.27 True False 371.4763565370336 464.2859167680304 217.7912734509804 319.5708510248248 309.5182524426536 322.1946107403586 213.11280384447065 195.06019051398553 135.91727700099048 341.06382087083836 280.87882035880364 1.3225502587290054 1.6529758853833716 0.7753922961253071 1.1377534647026597 1.1019636583750423 1.1470947162508616 0.7587357550570509 0.6944638626180833 0.48390005635656463 1.2142739008770844 1.0 8.133804032055625 -7.744020726764925 4.4857965468762675 0.743370761447154 1.189781921771234 0.2906751826578776 0.2648881174933025 0.16006128517197757 7.667597937648475 0.04135912076477961 0.060414219102984563 1.8029316936388938e-08 7.744020726764925 0.44641116032408 EQSEASRSPS(ph)R ddPTM_A549_MK2206_60min_R1 1 EQSEASRSPSR 11 1 Q6UXY1-2;Q6UXY1 Q6UXY1-2 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 EQSEAS(0.072)RS(0.122)PS(0.806)R 88.706 8.4761e-05 51352000.0 1242.0 1222.7 860.57 1064.9 1097.1 690.87 916.8 1083.0 1358.8 1865.1 1438.5 True False 1451.6192360153668 1284.9302074260486 982.6117662941086 1325.8005478051768 935.7180433195815 763.9774048376094 1083.370692748581 1236.5185665483991 1051.0339695577225 1443.7726146317934 1081.2807494197054 1.3424998427045078 1.1883409633581623 0.9087480442257482 1.226139047159305 0.8653793603758843 0.7065486047426773 1.0019328405966694 1.1435684647229738 0.9720268950702992 1.3352430582035495 1.0 10.078525445300032 -5.55608932224485 3.435797641761631 0.9833096134590384 1.3253917586556974 0.2445694117869902 0.16717121302873003 0.15762915923456833 3.691043305914427 0.017388720673411844 0.09681085061077031 2.779141617167284e-06 5.55608932224485 0.3420821451966589 EQSEASRSPS(ph)R ddPTM_A549_PD325901_60min_R1 2 EQSEASRSPSR 11 1 Q6UXY1-2;Q6UXY1 Q6UXY1-2 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 EQSEAS(0.044)RS(0.316)PS(0.639)R;EQSEAS(0.052)RS(0.226)PS(0.722)R 102.5 6.3934e-05 139120000.0 3650.2 3326.8 3381.3 3433.4 4162.700000000001 3709.0 3185.2999999999997 4018.4 4054.3 4264.5 3718.2 True False 4020.765616864787 3607.1611114056145 3610.7753514086785 3645.473320182845 3870.326312535396 3678.7951337150325 3306.518334563039 3938.249859626184 3883.911870208034 3995.238742215876 3260.8849716117766 1.233028963569181 1.1061908478245652 1.107299209522242 1.1179398696731628 1.1868944615431765 1.1281585108770926 1.0139941651878346 1.2077242509046868 1.1910606795456236 1.225200758995533 1.0 11.671047835281678 -10.891965012284615 1.1282117802079445 0.9995484908081835 1.1434090530077055 0.0 0.08756384175113223 0.36551037968740796 0.8221056611747894 0.041238532988322245 0.009755232612885672 1.282433894179925e-11 10.891965012284615 0.14386056219952192 EQSEVSVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EQSEVSVSPR 10 0 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 EQSEVS(0.003)VS(0.997)PR;EQSEVSVS(1)PR 179.35 2.7899e-11 480980000.0 3850.48 3651.3 3713.4500000000003 3893.9 5321.6 3932.6400000000003 3626.58 3172.62 5307.7 5434.2 4792.9 True False 4500.3468888022935 3837.135574036744 4240.07304872917 4847.905674803814 4538.799689480894 4348.7893545248435 4285.482642788121 3622.34860074126 4105.514424655227 4206.610445784191 3602.690652689403 1.2491627293736118 1.065074952014636 1.1769184361038498 1.3456347330806377 1.2598360855913862 1.2070948559734038 1.1895227916915416 1.0054564629458769 1.1395689556610882 1.167630210671561 1.0 11.814859063823123 -8.139114043057937 5.283560897001806 1.0633987593165104 1.214871263069789 0.4023851619749502 0.07888191527271678 0.16810523515154757 6.6414247918213745 0.013380122909956662 0.01737159970856746 7.25915311512113e-09 8.139114043057937 0.1514725037532787 EQSEVSVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EQSEVSVSPR 10 0 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 EQSEVSVS(1)PR;EQSEVSVS(1)PR 213.72 2.1067e-26 592820000.0 8272.4 9279.1 9493.800000000001 8112.9 10387.0 9530.7 9042.6 9000.800000000001 10425.199999999999 10014.2 10195.1 True False 9112.207958180985 10061.082322004278 10138.10635885716 8614.015407267256 9657.452953204694 9453.085139093511 9386.721091300584 8821.271983009 9987.065098609566 9381.901702965937 8941.167332063696 1.0191295632622739 1.1252537782090806 1.1338683174512516 0.9634106025928797 1.080110973717307 1.057254023777638 1.049831721372566 0.9865906380451307 1.1169755276579159 1.0492927102842304 1.0 13.126247482316629 -6.186918533812306 24.999987774937825 1.048050449293893 1.0960007576992405 0.1727786172285375 0.04983333338128269 221.95781940601466 74460.44539322834 0.007712767542622125 0.02040606465407627 6.502516549487364e-07 6.186918533812306 0.04795030840534764 EQSGLQAS(ph)LEAEQEALEKDQER ddPTM_A549_MK2206_60min_R1 2 EQSGLQASLEAEQEALEKDQER 22 1 A0A1B0GTU3;Q96L93-5;Q96L93-6;Q96L93-4;Q96L93;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 EQS(0.011)GLQAS(0.989)LEAEQEALEKDQER;EQSGLQAS(1)LEAEQEALEKDQER 132.76 2.1094e-22 11628500.0 2080.63 2823.8999999999996 2444.69 2033.6599999999999 3117.3 2626.5 2485.0 2734.9 3925.8 3456.8 3349.4 True False 2431.789477480397 2967.624448147883 2791.3838025280284 2531.906791294467 2658.7492994623394 2904.434486670403 2936.4923336389884 3122.58045027998 3036.612568214386 2675.9064791481337 2517.6515412626777 0.9658959699644463 1.1787272382656777 1.108725237301134 1.0056621219410848 1.0560434023085248 1.1536284664770338 1.166361700780184 1.2402750734575096 1.2061290128702378 1.062858157807687 1.0 11.297862903509143 -7.246370475803149 23.476293820928472 1.1207865575786435 1.0687931383175782 0.1589566061873846 0.08038408206678536 938.2389142304476 1461705.999805176 0.0148983758120215 0.025724725090276148 5.6706066675460785e-08 7.246370475803149 -0.05199341926106538 EQSSDLTPSGDVS(ph)PVKPLSR ddPTM_A549_MK2206_60min_R1 2 EQSSDLTPSGDVSPVKPLSR 20 1 Q8WYQ5;Q8WYQ5-3 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 1 EQSSDLT(0.001)PS(0.031)GDVS(0.968)PVKPLSR;EQSSDLTPS(0.016)GDVS(0.983)PVKPLSR 186.68 2.3716e-44 139329000.0 14022.6 15533.3 15830.2 14828.7 23746.0 17268.5 17270.2 20042.2 27383.0 24014.0 26280.0 True False 16389.272060345465 16323.878621911377 18075.160396933425 18461.732165685637 20252.994856135985 19095.841208097412 20407.97179091028 22883.243226663282 21180.794221665532 18589.22072155266 19753.950708898054 0.8296705961184266 0.8263601981429659 0.9150149589464943 0.9345842984902081 1.025263004580301 0.9666846642224232 1.0331083686321858 1.1584135023864193 1.0722307924016823 0.9410381242461668 1.0 14.269853594770437 -6.2806840011564455 0.8710628771756831 1.0433298994994316 0.8046640198794934 0.6708882392063358 0.05449143446481736 0.3221707060222295 0.3808855193559488 0.00824986998622328 0.052316717434322035 5.239815543489881e-07 6.2806840011564455 -0.23866587961993813 EQSSDLTPSGDVS(ph)PVKPLSR ddPTM_A549_PD325901_60min_R1 2 EQSSDLTPSGDVSPVKPLSR 20 1 Q8WYQ5;Q8WYQ5-3 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 1 EQSSDLTPS(0.008)GDVS(0.991)PVKPLSR;EQSSDLTPS(0.003)GDVS(0.997)PVKPLSR 188.69 1.7490000000000003e-44 263390000.0 22617.0 23534.0 23860.0 22421.0 27779.0 24109.0 24734.0 25434.0 25215.0 25385.0 26497.0 True False 24913.06119024459 25517.29277258018 25479.283081835714 23805.894248214467 25827.89887234746 23912.664297313484 25675.265904964122 24926.698917413 24155.301237524483 23782.18676776881 23238.0369783221 1.0720811406525026 1.0980829747531735 1.0964473077310442 1.0244365421408916 1.111449254360054 1.0290311664285894 1.1048810159358824 1.0726680115306724 1.0394725363445314 1.0234163406295604 1.0 14.504200582489217 -9.367849908694865 0.6470635826641855 1.0036113305865273 1.0788012560555735 0.43390248893395933 0.02807609005305275 0.3417486871237236 0.3172029784229493 0.010053754859937983 0.0065737713515277565 4.28696651505193e-10 9.367849908694865 0.07518992546904624 EQSSEAAET(ph)GVSENEENPVR ddPTM_A549_MK2206_60min_R1 1 EQSSEAAETGVSENEENPVR 20 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 EQSSEAAET(0.5)GVS(0.5)ENEENPVR 79.97 0.00023148 9472500.0 207.07 522.55 217.18 178.92 519.66 433.49 301.46 544.57 368.82 408.17 455.14 True False 242.0183536245587 549.1455630084906 247.9793897111852 222.755408032024 443.21870238943933 479.36162407262617 356.2313798385552 621.7644651756807 285.2828588845153 315.9641135136234 342.11617677503284 0.7074156969306482 1.6051435164072794 0.7248397081037484 0.6511104214124972 1.2955210319706367 1.4011662020525926 1.0412585081377317 1.817407382009117 0.8338771395545854 0.9235579459938651 1.0 8.41834251253398 EQSSEAAETGVS(ph)ENEENPVR ddPTM_A549_MK2206_60min_R1 1 EQSSEAAETGVSENEENPVR 20 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 EQSSEAAET(0.001)GVS(0.999)ENEENPVR 114.4 4.2637e-14 12281000.0 304.69 217.69 0.0 421.83 423.71 151.91 314.98 0.0 374.1 333.64 233.32 True False 356.1142230447037 228.76949117083203 0.0 525.1783689366682 361.3828202852429 167.98501537030302 372.2077888328406 0.0 289.3669473149425 258.2704922769567 175.38020469558964 2.030526898191373 1.3044202540868912 0.0 2.994513376513781 2.0605679011066336 0.9578333863954454 2.122290765248495 0.0 1.6499407548143847 1.472631946833687 1.0 7.454342108599786 EQSSEAAETGVS(ph)ENEENPVR ddPTM_A549_PD325901_60min_R1 2 EQSSEAAETGVSENEENPVR 20 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 EQSSEAAET(0.005)GVS(0.995)ENEENPVR;EQSSEAAET(0.116)GVS(0.883)ENEENPVR 112.56 1.6244e-10 22503000.0 468.03999999999996 295.56 342.12 404.44000000000005 536.22 493.7 579.82 277.56 505.14 201.1 293.9 True False 515.5550762471626 320.4678784679101 365.33832053468706 429.4213402501168 498.55775705857536 489.67947088571344 601.8853673896783 272.0238480583923 483.9107224716688 188.40251168005926 257.752163185601 2.0001968940835777 1.2433179008361963 1.4174015690864092 1.66602419526893 1.9342524652240307 1.8998074151296542 2.335132167082049 1.0553697966930915 1.8774264257996416 0.7309444442737626 1.0 8.009840725240245 -10.869647259474707 0.8716390089416247 0.9518122384300848 1.7157185658691982 0.44467595311373864 0.35797456928209165 0.6192161943466852 0.7432313687288075 0.32944280351903993 0.06178327591213292 1.3500589756522228e-11 10.869647259474707 0.7639063274391135 EQST(ph)PPKS(ph)PQ ddPTM_A549_MK2206_60min_R1 2 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 2 EQS(0.075)T(0.925)PPKS(1)PQ;EQS(0.077)T(0.923)PPKS(1)PQ 127.79 3.185e-06 143121000.0 13954.5 15683.0 14266.099999999999 11527.2 18740.2 14136.0 12655.8 12967.0 19408.3 19388.9 18908.1 True False 16309.678445230627 16481.19771249098 16289.247497737992 14351.364517475673 15983.541404992833 15631.862137282622 14955.195040671357 14805.111959772019 15012.351038686444 15008.934023824135 14212.696932987641 1.1475428289317768 1.1596108599373671 1.1461053151658136 1.0097565989862336 1.1245959496888354 1.0998519289467927 1.0522418870383692 1.0416820980266865 1.0562633615188688 1.056022941640895 1.0 13.79489271897665 -2.00000000000018 0.1266940433047107 0.977556539452522 1.578725899318174 0.5463625856196681 0.036523712260783346 33.4542008282914 0.2773063028147054 0.1002473280722975 3.6025358451075276 0.00999999999999586 2.00000000000018 0.6011693598656521 EQST(ph)PPKS(ph)PQ ddPTM_A549_PD325901_60min_R1 3 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 2 EQS(0.029)T(0.971)PPKS(1)PQ;EQS(0.093)T(0.907)PPKS(1)PQ;EQS(0.153)T(0.849)PPKS(0.998)PQ 122.64 7.243600000000001e-05 100963500.0 9985.0 9848.8 9689.4 9879.800000000001 11714.3 10249.5 10550.8 12009.900000000001 12092.199999999999 12294.2 11665.400000000001 True False 10998.669849431506 10678.7929403666 10346.980951095511 10490.052807346216 10891.52798014111 10166.03147021089 10952.31646761929 11770.353122915709 11584.006885758232 11517.942113858706 10230.629753063324 1.0750726118436855 1.0438060215373433 1.0113728285394503 1.0253574863468413 1.0645999555286316 0.9936857960446578 1.070541768393082 1.1505013285610646 1.132286786381813 1.1258292394375748 1.0 13.320607333396907 -7.951578161028229 24.97243973043549 1.0727074116967266 1.0354602872863248 0.24163183611566286 0.045352337681972624 231.00147887390239 119133.01579278169 0.009093429398287875 0.01256437609018697 1.1179486065634869e-08 7.951578161028229 -0.03724712441040179 EQST(ph)PPKSPQ ddPTM_A549_MK2206_60min_R1 1 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EQS(0.306)T(0.694)PPKSPQ 100.38 0.0017410999999999998 28306000.0 3931.3 4267.5 4529.4 4233.6 4712.5 3855.9 3929.7 3713.4 6980.8 7640.0 8313.5 True False 4594.807328942999 4484.697522033747 5171.737028077365 5270.832190053524 4019.2974926110014 4263.92877866073 4643.675623139287 4239.785821810552 5399.659946046916 5914.118693789558 6249.028509072455 0.7352834640251958 0.7176631560446205 0.8276065664557205 0.8434642572683471 0.6431875749607657 0.6823346656956805 0.7431036066482196 0.6784711920669193 0.864079902693289 0.9464060989965611 1.0 12.609416206583475 -9.31036597767426 1.0948487046952813 0.9678904727016091 0.7357401292569403 0.672481738931137 0.06324166675129869 0.17679006202252887 0.44351489599017785 0.017201769279516867 0.01405555006516485 4.893662591905707e-10 9.31036597767426 -0.23215034344466878 EQST(ph)PPKSPQ ddPTM_A549_PD325901_60min_R1 1 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EQS(0.073)T(0.927)PPKSPQ 156.36 5.7146999999999995e-08 50864000.0 12863.0 13467.0 13318.0 13593.0 16636.0 14298.0 13542.0 12980.0 13828.0 10469.0 11683.0 True False 14168.842290759878 14601.911352440602 14221.839567639901 14432.608738057153 15467.544751084355 14181.561828486787 14057.348220466736 12721.103717386984 13246.857248165334 9807.985553349283 10246.065064638906 1.3828569505828352 1.425123816833307 1.3880294023041235 1.4086001452271464 1.5096082889875213 1.3840983576641552 1.3719753028878652 1.2415599195529123 1.292872645703054 0.9572441216675934 1.0 13.322782337896477 -10.171638491640117 0.3453296941216641 0.9101478456488826 1.4372612915575949 0.9169805428706924 0.04828013727947018 0.4265674771982809 0.08638077048842761 0.08542591119121873 0.021043162032530625 6.735370777998394e-11 10.171638491640117 0.5271134459087122 EQSTLES(ph)EEWNPWEGDEKNEQQHR ddPTM_A549_MK2206_60min_R1 2 EQSTLESEEWNPWEGDEKNEQQHR 24 1 F5GXF8;Q9Y2B1 F5GXF8 TMEM5 Transmembrane protein 5 1 EQS(0.001)T(0.004)LES(0.995)EEWNPWEGDEKNEQQHR;EQS(0.001)T(0.001)LES(0.997)EEWNPWEGDEKNEQQHR 170.46 2.4811999999999997e-41 37668000.0 3462.5 3689.5 2834.0 2490.4 5064.7 4209.0 3677.3999999999996 3605.9 5417.6 5395.9 5218.4 True False 4046.885350002579 3877.279790871352 3235.903814538624 3100.548111798304 4319.689339167519 4654.393586291919 4345.535978963385 4117.04736760561 4190.522250129468 4176.962442384695 3922.5272594868197 1.0317035631084508 0.9884647153168828 0.8249538117835729 0.7904465429270071 1.101251579251653 1.1865803035619562 1.1078408616418147 1.0495905051133383 1.0683220212159112 1.0648651152856903 1.0 11.937567757856684 -6.780257490035374 24.9999724913973 1.055953809558586 0.9085802778268692 0.5148838626891745 0.07845150618980104 185.61146132674352 246585.63075469245 0.012649315775805707 0.023933393754016583 1.658603242079664e-07 6.780257490035374 -0.14737353173171686 EQSTLES(ph)EEWNPWEGDEKNEQQHR ddPTM_A549_PD325901_60min_R1 2 EQSTLESEEWNPWEGDEKNEQQHR 24 1 F5GXF8;Q9Y2B1 F5GXF8 TMEM5 Transmembrane protein 5 1 EQS(0.006)T(0.005)LES(0.989)EEWNPWEGDEKNEQQHR;EQSTLES(1)EEWNPWEGDEKNEQQHR 161.24 4.6903e-34 47676000.0 6455.0 6452.6 6254.5 6695.0 7604.7 7019.4 6691.3 7841.6 7388.7 6630.4 8040.2 True False 7110.306848080153 6996.383247401667 6678.967981363846 7108.5349445518 7070.572106790766 6962.236333674657 6945.941083119854 7685.1931363838075 7078.178633896382 6211.755412448856 7051.306371027116 1.00836731152336 0.9922109293320284 0.9471958286774832 1.0081160242532972 1.0027322221940052 0.9873682928147277 0.9850573379792156 1.0898963584905697 1.0038109623175189 0.8809368201574869 1.0 12.783674850032547 EQSTPPKS(ph)PQ ddPTM_A549_MK2206_60min_R1 2 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EQSTPPKS(1)PQ;EQST(0.001)PPKS(0.998)PQ 133.48 7.2559e-07 189620000.0 28775.0 30639.0 28533.0 23608.0 33853.0 23340.0 23017.0 22595.0 31459.0 35378.0 35511.0 True False 33631.516518794015 32198.39423025 32579.408447505513 29391.961059803383 28873.268544797927 25809.823308161896 27198.890963126214 25797.9104442854 24333.58672970004 27386.085228911914 26692.638646258714 1.2599547375024263 1.2062649428164713 1.220539073684718 1.1011260988213696 1.0816940553325496 0.9669266365983434 1.0189659899711134 0.9664803388743015 0.9116216291756782 1.0259789446762093 1.0 14.704154306749489 -6.649432669937975 0.8890282899302242 0.9592382756017034 1.2552469245392552 0.8933263113881459 0.036085275521422155 0.14087666746279595 0.20030340729426055 0.006211131864860351 0.025268132167622005 2.2416475486306935e-07 6.649432669937975 0.29600864893755185 EQSTPPKS(ph)PQ ddPTM_A549_PD325901_60min_R1 2 EQSTPPKSPQ 10 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 EQST(0.001)PPKS(0.999)PQ;EQSTPPKS(1)PQ 129.29 1.1287999999999999e-06 199294000.0 34546.0 33424.0 32728.0 31076.0 40691.0 38329.0 39968.0 41800.0 43926.0 44928.0 49574.0 True False 38053.08448857893 36240.75778153819 34949.11888945177 32995.49394128331 37833.00453632926 38016.861331939435 41489.004111328795 40966.26620853435 42079.942976779705 42091.238412539555 43476.71227547798 0.8752521176731636 0.8335671186889386 0.8038583660145803 0.7589233917278895 0.8701900984741222 0.8744189553951612 0.9542810838235737 0.9422576838138796 0.9678731618470128 0.9681329661231107 1.0 15.407955226924795 -7.703173925412331 1.103228642782665 0.9843974555926149 0.8186666874668076 0.8184156210802904 0.03132882240290393 0.13006336445244301 0.3196704407306839 0.005659751920760418 0.0097345601272849 1.98073362658264e-08 7.703173925412331 -0.16573076812580734 EQTLQGAEEDEDLEGPPSYKPPT(ph)PK ddPTM_A549_MK2206_60min_R1 2 EQTLQGAEEDEDLEGPPSYKPPTPK 25 1 Q92692 Q92692 PVRL2 Nectin-2 1 EQTLQGAEEDEDLEGPPS(0.023)YKPPT(0.977)PK;EQTLQGAEEDEDLEGPPS(0.034)Y(0.001)KPPT(0.966)PK 118.23 2.6693e-17 83937000.0 3672.6 3882.8999999999996 3311.8999999999996 2775.0 4807.6 3785.8999999999996 3170.3 3839.2 6123.1 4899.4 5312.3 True False 4292.44509355075 4080.523024793164 3781.577220667068 3454.8751245744834 4100.408408589212 4186.52142512297 3746.302472972107 4383.418357056895 4736.227626581463 3792.6221372189193 3993.109297978658 1.0749630859650194 1.0218911430395246 0.947025723183017 0.865209255935811 1.0268710677829103 1.048436472110147 0.9381918183077316 1.0977456488045079 1.1861001723591629 0.9497917172311745 1.0 11.963296846113073 -8.277335415897118 23.987673982114462 1.0910760070182342 0.9875845912976942 0.10200698755614535 0.08002776775806253 515.7304890436425 778253.3783110664 0.014126913148779225 0.017111789744895068 5.280372785762802e-09 8.277335415897118 -0.10349141572053999 EQTLQGAEEDEDLEGPPSYKPPT(ph)PK ddPTM_A549_PD325901_60min_R1 1 EQTLQGAEEDEDLEGPPSYKPPTPK 25 1 Q92692 Q92692 PVRL2 Nectin-2 1 EQTLQGAEEDEDLEGPPS(0.001)YKPPT(0.999)PK 250.22 3.7629999999999994e-124 65768000.0 13334.0 13828.0 15890.0 14689.0 17822.0 13816.0 16029.0 16874.0 14826.0 17062.0 17186.0 True False 14687.657864028004 14993.334089370228 16968.390954332324 15596.30616886056 16570.24420256225 13703.487076680201 16638.992366405368 16537.434832603092 14202.914778803812 15984.702408180872 15072.230951030064 0.974484660681518 0.9947654158222381 1.1258048665431757 1.0347709121186655 1.0993889528630008 0.9091877056026454 1.103950199573357 1.097212143731973 0.9423233245927113 1.060539906807124 1.0 13.879605356125058 -8.773767103056535 24.999239819898715 0.9727637923055469 1.0428854246393988 0.026138145843584537 0.06812875491411989 258.32295891916095 523848.51774912304 0.010793260172796798 0.011529479607651912 1.6835766623218005e-09 8.773767103056535 0.07012163233385194 EQTLS(ph)PTITSGLHNIAR ddPTM_A549_MK2206_60min_R1 2 EQTLSPTITSGLHNIAR 17 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0Y8W8 D6REX3 SEC31A Protein transport protein Sec31A 1 EQT(0.02)LS(0.973)PT(0.007)ITSGLHNIAR;EQT(0.034)LS(0.689)PT(0.22)IT(0.055)S(0.003)GLHNIAR 92.8 1.3990999999999999e-06 8231400.0 1922.9299999999998 1862.0900000000001 2011.47 1656.01 2667.9 1869.01 1620.81 1748.8600000000001 2830.3 2723.5 2795.8 True False 2247.473572875224 1956.8624273705486 2296.7266922477093 2061.7325243411124 2275.4554441457603 2066.7873976515716 1915.2901968955375 1996.7662606591275 2189.241569060364 2108.259458447103 2101.5256998454024 1.0694485311507531 0.9311627392967424 1.0928853700988128 0.981064625806281 1.0827635580726673 0.9834699608021038 0.9113808111109156 0.9501507694176752 1.0417391370571458 1.003204223770471 1.0 11.03722138417496 -4.05673924753297 14.928337530271879 1.0101641382211388 1.0133503736440312 0.0 0.058726778614331 0.0 0.0 0.007267872770320834 0.0 8.775275347015778e-05 4.05673924753297 0.003186235422892425 EQTLS(ph)PTITSGLHNIAR ddPTM_A549_PD325901_60min_R1 1 EQTLSPTITSGLHNIAR 17 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0Y8W8 D6REX3 SEC31A Protein transport protein Sec31A 1 EQT(0.029)LS(0.948)PT(0.021)IT(0.001)SGLHNIAR 89.866 1.9496e-06 6543800.0 1269.8 1302.5 1310.9 1096.8 1489.8 1307.9 1380.6 1198.3 1409.8 1585.1 1453.2 True False 1398.7091612226466 1412.266246124148 1399.86555708208 1164.546844986469 1385.161587530986 1297.2488960328635 1433.1394884933084 1174.398966451835 1350.5510087115615 1485.0165154851422 1274.4656125937906 1.097486779871601 1.1081242460908032 1.0983941373146 0.9137530534200801 1.0868567765527286 1.0178767345418638 1.1245022810592629 0.9214834475303729 1.0596998423228714 1.1652072059149863 1.0 10.315676732004396 -6.048483361408282 24.994236780803252 1.0246703465173563 1.1029192994443 0.12323768130638701 0.07290891365474997 354.0174882583177 182503.4815521312 0.0076115643989103626 0.020138827503649866 8.943687961307198e-07 6.048483361408282 0.07824895292694367 EQTNQS(ph)LR ddPTM_A549_MK2206_60min_R1 1 EQTNQSLR 8 0 A0A0A0MRK1;Q5T3I0;F8W895;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 EQT(0.106)NQS(0.894)LR 52.79 0.026391 1135100.0 478.48 538.92 205.47 201.95 441.25 321.49 373.62 292.94 346.09 479.75 519.02 True False 559.2357262871434 566.3487260865675 234.60873562923481 251.42775906587997 376.3427095203404 355.50985841220927 441.5019177843857 334.46514209112485 267.7011675921638 371.3741417991546 390.1330097767225 1.4334488809526789 1.451681123857464 0.6013557677764926 0.64446676585961 0.9646523111072441 0.9112529560512492 1.1316702425079648 0.8573105420701084 0.6861792283236228 0.9519167373499008 1.0 8.607822262032075 -5.746223568340054 24.99560749250016 0.8532117508970877 1.4425655125936465 0.6804220853053471 0.1536540727296212 111.13844632082805 182568.33989725073 0.023545986226268988 0.09049011532675282 1.793809962419124e-06 5.746223568340054 0.5893537616965588 EQVANSAFVER ddPTM_A549_MK2206_60min_R1 2 EQVANSAFVER 11 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 113.61 7.011e-05 7855400.0 3897.4 4473.299999999999 3853.0 4452.1 4437.3 3909.0 3696.8 3696.4 6209.700000000001 5762.0 6289.3 False True 4555.185837718426 4700.971862990873 4399.413337126792 5542.864699862363 3784.579048055767 4322.647785415803 4368.4607078457175 4220.376019750233 4803.212864853248 4460.360198117201 4727.4932341504045 0.9635520585862998 0.994389971630642 0.9306017204522613 1.172474380253342 0.8005466873472761 0.9143636111819083 0.924054354279957 0.8927302083191014 1.0160168670693934 0.9434937243054118 1.0 12.206859678095793 -8.806884943327944 24.993869858966228 1.007563552801846 0.9504855425919655 0.019968445246587696 0.087296312239752 235.5102055960037 129523.36415691784 0.014275486096031454 0.01519743934313106 1.5599657263408631e-09 8.806884943327944 -0.05707801020988057 EQVANSAFVER ddPTM_A549_PD325901_60min_R1 2 EQVANSAFVER 11 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 184.58 3.442e-18 52450000.0 18171.9 18685.300000000003 17966.6 18449.7 20815.0 19458.7 18126.0 20393.7 20870.2 19896.5 21496.3 False True 20016.697910554274 20259.975807066054 19185.921517942556 19589.29606669116 19353.026207851715 19300.234798711426 18815.7948489278 19986.931654951848 19993.09807207549 18640.23159444208 18852.391376272986 1.0617590899235545 1.0746634420376298 1.0176916622943304 1.0390881281695445 1.0265555080831184 1.0237552580730995 0.9980587859325238 1.0601801785266753 1.060507267912874 0.9887462668477208 1.0 14.20245991672335 -5.757233552709313 24.985160417473857 1.028879287000172 1.0682112779744197 0.34355077278363255 0.02280142024941702 101.0614926394882 600338.9365498322 0.0034066161864087586 0.012309829668935153 1.748905917828791e-06 5.757233552709313 0.03933199097424778 EQVEPT(ph)PEDEDDDIELR ddPTM_A549_PD325901_60min_R1 1 EQVEPTPEDEDDDIELR 17 0 A0A087WZG9;B4DSP0;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7-2;Q86TG7 A0A087WZG9 PEG10 Retrotransposon-derived protein PEG10 1 EQVEPT(1)PEDEDDDIELR 75.383 0.00050878 397130.0 220.43 0.0 141.53 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 242.8078913280106 0.0 151.135076889028 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EQVTAT(ph)PR ddPTM_A549_MK2206_60min_R1 2 EQVTATPR 8 0 Q8IYA6-2;Q8IYA6-3;Q8IYA6 Q8IYA6-2 CKAP2L Cytoskeleton-associated protein 2-like 1 EQVTAT(1)PR;EQVTAT(1)PR 113.44 0.0014414000000000002 17291300.0 2645.7 3338.7 2846.7 2457.8 3343.9 3081.3 2496.2 2480.2 4017.4 4312.3 4642.700000000001 True False 3092.2294788452914 3508.6255692593004 3250.4048655070924 3059.9611103348343 2852.0167396375455 3407.361120798598 2949.7272286638395 2831.7759452939426 3107.46531446953 3338.148434977579 3489.7894579985164 0.8860790933269551 1.0053974921660709 0.931404288031543 0.8768325846481869 0.81724607571978 0.9763801403517355 0.8452450396120984 0.8114460712819158 0.8904449256522601 0.9565472287523308 1.0 11.768924284689009 -10.537831549379003 0.9723774248023955 0.9965829323839579 0.8947838362486666 0.2276397524495789 0.05852439478903778 0.5123312264531639 0.9065357054509702 0.03330587200965237 0.010715473724859452 2.898467603804256e-11 10.537831549379003 -0.10179909613529126 EQVTAT(ph)PR ddPTM_A549_PD325901_60min_R1 2 EQVTATPR 8 0 Q8IYA6-2;Q8IYA6-3;Q8IYA6 Q8IYA6-2 CKAP2L Cytoskeleton-associated protein 2-like 1 EQVTAT(1)PR;EQVTAT(1)PR 128.91 0.0011302 30678000.0 3098.0 3482.8 4078.0 3732.6000000000004 4323.0 3497.0 3824.4 3836.2 3679.3999999999996 4037.2 3983.6000000000004 True False 3412.5066793729397 3776.307778887661 4354.757603006117 3963.154224650346 4019.367393540378 3468.5215914266537 3969.9396347919806 3759.6839815593185 3524.767613458166 3782.2905030071356 3493.6424541209917 0.9767761653307291 1.0809084869097711 1.2464806173480578 1.1343903323522797 1.1504804645361628 0.9928095496250035 1.1363325488872404 1.076150187356612 1.0089090855019982 1.082620947242516 1.0 11.77051625237265 -8.6751492031397 3.1670672766903643 1.0036223996144744 1.1063362502133778 0.1257629896699991 0.07380878518838438 0.2280993942201718 4.550957427725175 0.012261474672423112 0.013726537193296319 2.1127630692062266e-09 8.6751492031397 0.10271385059890337 EQYVPPRS(ph)PK ddPTM_A549_MK2206_60min_R1 5 EQYVPPRSPK 10 1 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK 90.79299999999999 0.00020359 588909000.0 95427.7 105390.1 91418.8 89344.79999999999 122030.40000000001 95670.2 87187.99999999999 97979.8 132494.2 137071.7 131592.7 True False 111533.5627767342 110754.00593248689 104383.3604941933 111234.28001084067 104079.88981269345 105793.95706326094 103028.93102024782 111868.73670055304 102484.47524976064 106107.10776957004 98914.60081624096 1.1275743101257232 1.1196932001802307 1.0552876889036025 1.1245486418884372 1.0522196819663492 1.0695484406776319 1.0415947713487748 1.130962828312654 1.0360904700020135 1.0727143100611707 1.0 16.59389587293461 -2.000000068619476 0.0198399080354897 0.406601303364933 1.929184923137268 0.16266758495604527 0.03857014911545679 1130.4249276793587 1.6813369431591272 47.609526757070725 87.00487764203096 0.009999998419978302 2.000000068619476 1.522583619772335 EQYVPPRS(ph)PK ddPTM_A549_PD325901_60min_R1 6 EQYVPPRSPK 10 1 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 EQY(0.001)VPPRS(0.999)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQY(0.003)VPPRS(0.997)PK 107.17 0.00018981 921217000.0 109656.29999999999 110785.5 110215.8 110757.6 133224.7 120186.20000000001 114748.6 123769.1 134473.4 140896.7 142267.0 True False 120788.5268512983 120121.7828867461 117695.70696944637 117598.84540323983 123867.45667226432 119207.4434348077 119115.42076584348 121300.42820551958 128821.95064184525 132000.45831641892 124769.06090481744 0.9680967859768075 0.9627529614764304 0.9433084301182076 0.9425321033148791 0.9927738156718121 0.9554247068169206 0.9546871628433033 0.9721995767689238 1.0324831308950835 1.05795825791394 1.0 16.928900706610477 -8.637319911950982 5.317650396750673 1.0152441341775318 0.9600904519423002 0.7005918179369177 0.01944368439527747 0.08574614603401287 3.70319922895295 0.0028808587357948326 0.003265058127093562 2.305048607934907e-09 8.637319911950982 -0.05515368223523154 ERARGDS(ph)EALDEES ddPTM_A549_PD325901_60min_R1 1 ERARGDSEALDEES 14 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 ERARGDS(0.993)EALDEES(0.007) 63.037 0.046041000000000006 2372300.0 630.03 490.32 497.27 661.13 590.11 1003.4 771.11 1104.2 854.63 952.21 887.36 True False 693.9901817964275 531.6409871781897 531.0177325274284 701.9664985648296 548.6627093689824 995.2286430762099 800.455013017583 1082.1758647718573 818.7128731558821 892.0872980948244 778.2203454384994 0.8917656623400005 0.6831496892806483 0.6823488175809884 0.902015094670002 0.7050223148044665 1.2788519972649057 1.0285711723028201 1.3905777086335231 1.0520322142112162 1.1463171109875894 1.0 9.60403488774103 -7.243665285857434 24.949866410089985 1.0718694067457009 0.7700232264331566 0.6263881629013447 0.1378717289830594 496.0395905259242 696301.3123520548 0.02044505223666731 0.03536621966496902 5.70603871709468e-08 7.243665285857434 -0.3018461803125443 ERAS(ph)LDK ddPTM_A549_MK2206_60min_R1 3 ERASLDK 7 1 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 ERAS(1)LDK;ERAS(1)LDK;ERAS(1)LDK 83.86200000000001 0.0039923 128529000.0 19000.0 18830.6 16210.1 14980.7 16079.5 13257.199999999999 12566.7 15406.6 16249.4 22985.1 24144.1 True False 22206.735494598994 19788.997108004376 18508.935929446914 18650.97217250917 13714.22685038484 14660.068104582864 14849.906724000435 17590.532730733685 12568.936844959713 17792.749946154752 18148.45362673918 1.2236158491145772 1.0903957722793576 1.019862976213941 1.027689331339481 0.7556691678776899 0.8077860740147759 0.8182463932971786 0.9692579374816002 0.692562413496275 0.9804003311852229 1.0 14.147559005452129 -6.03484654872454 1.1424262973247292 0.8499966162729117 1.202863360075079 0.5599291879413988 0.10011442900351945 0.41146576053152395 0.854388308133876 0.018349033227979226 0.12391478369508975 9.228974611749837e-07 6.03484654872454 0.3528667438021674 ERAS(ph)LDK ddPTM_A549_PD325901_60min_R1 3 ERASLDK 7 1 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 ERAS(1)LDK;ERAS(1)LDK;ERAS(1)LDK 96.015 0.0041945 202017000.0 25634.3 25590.0 24609.5 22876.8 28998.699999999997 21682.100000000002 23263.9 23104.1 24614.5 25379.2 25797.6 True False 28236.675265025733 27746.559108112808 26279.64865894535 24289.84797901757 26961.931352084048 21505.52816627736 24149.22044499454 22643.270600684173 23580.038164229478 23776.752980758625 22624.65874446022 1.24804867043308 1.2263857511179794 1.1615489522192275 1.0736006343063664 1.1917055482079186 0.950534918965048 1.067384958940325 1.0008226358874257 1.0422273516060518 1.050922060275517 1.0 14.465608411241961 -5.994424021762327 0.5521027204871342 1.0154813742330062 1.3207937677974602 0.7127174790666513 0.05087074268911177 0.7054250892605092 0.22874741638477497 0.008808280374112408 0.11811015906276333 1.0129219403184239e-06 5.994424021762327 0.30531239356445394 ERAS(ph)LDKK ddPTM_A549_MK2206_60min_R1 1 ERASLDKK 8 2 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 ERAS(1)LDKK 45.879 0.014871 23175000.0 5330.5 5798.6 5730.0 4539.4 5353.4 4075.9 4167.4 4489.9 4882.5 6982.5 8056.4 True False 6230.158081787365 6093.72397217689 6542.600161364265 5651.553203781412 4565.921951606096 4507.209032636552 4924.5626363006495 5126.357074742069 3776.6215457503545 5405.1484004431395 6055.773534671472 1.0287964115760735 1.006266819141789 1.0803904941136813 0.9332504215067235 0.7539783192790414 0.7442829568891847 0.8132012546548786 0.8465239073739861 0.6236398247272366 0.8925611847102157 1.0 12.564095539108017 -6.542965351229902 4.344500899887864 0.8099845949417387 1.0330239225327413 0.5534851451588594 0.09034315897293195 0.17212676109920136 7.728074941098276 0.0192206254585585 0.042761475503702996 2.8644064881287093e-07 6.542965351229902 0.22303932759100265 ERAS(ph)LDKK ddPTM_A549_PD325901_60min_R1 3 ERASLDKK 8 2 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 ERAS(1)LDKK;ERAS(1)LDKK;ERAS(1)LDKK 73.632 0.0010630999999999998 146428000.0 24222.6 25006.3 26096.5 23697.4 30398.7 21818.199999999997 22362.5 21814.800000000003 24221.300000000003 27602.300000000003 25706.0 True False 26681.660520264344 27113.66866061747 27867.56542100273 25161.134577299763 28263.60018182184 21640.519813001156 23213.517174729546 21379.686700620474 23203.36299283965 25859.486067362017 22544.32496375999 1.183520046093867 1.202682657573589 1.2361233022412448 1.1160739839292724 1.2536902403268044 0.9599098597003147 1.0296833997933086 0.9483400693961042 1.029232990126742 1.1470508036470886 1.0 14.460476692096812 -7.263421097390947 24.99941686245286 1.006625358680776 1.1961750373611504 0.6960462430372867 0.058704222081736444 46.742192606572544 589655.6911377052 0.005599581054282994 0.009226996076052159 5.452289438700337e-08 7.263421097390947 0.1895496786803743 ERAS(ph)LDKKR ddPTM_A549_MK2206_60min_R1 2 ERASLDKKR 9 3 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 ERAS(1)LDKKR;ERAS(1)LDKKR 69.86399999999999 0.0011242000000000001 75079000.0 9812.0 8730.9 9088.099999999999 7444.5 12455.8 9028.0 8909.1 7021.0 13886.2 14759.0 17318.1 True False 11468.025719631856 9175.265517310936 10376.929236735523 9268.402834196302 10623.568320098484 9983.336967698611 10527.76814874169 8016.248250910727 10740.997871704772 11424.931649429329 13017.537814755233 0.8809673444261462 0.7048387834841452 0.7971499206995497 0.711993540260023 0.8160965976266871 0.7669143819488361 0.8087372818543752 0.6158037230223675 0.8251174703352866 0.8776568819703598 1.0 13.668168977180674 -9.98078197850032 0.8224146196026723 0.9855984392668726 0.7644740727312799 0.39979757488673984 0.07582905284678716 0.25971682101089666 0.35654280648986103 0.028620071650642075 0.013506242442710653 1.045244814075509e-10 9.98078197850032 -0.22112436653559275 ERAS(ph)LDKKR ddPTM_A549_PD325901_60min_R1 2 ERASLDKKR 9 3 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 ERAS(1)LDKKR;ERAS(1)LDKKR 54.7 0.0056605 94446000.0 9269.0 8673.3 8571.9 8186.900000000001 10590.3 9086.0 9299.2 9700.8 10624.8 9155.8 10420.2 True False 10209.982056522842 9404.229429948997 9153.640681022101 8692.586219201065 9846.473862551618 9012.006628453699 9653.0861447175 9507.309933869625 10178.276604737268 8577.7012254614 9138.581459090168 1.1172392676291076 1.029068840940799 1.0016478730314269 0.9511964475136925 1.0774619569383286 0.9861494006260058 1.0563002789799014 1.040348546044056 1.1137698613621168 0.9386250222597885 1.0 13.157754524260104 ERATS(ph)DPR ddPTM_A549_PD325901_60min_R1 1 ERATSDPR 8 1 Q01780-2;Q01780 Q01780-2 EXOSC10 Exosome component 10 1 ERAT(0.388)S(0.612)DPR 44.318000000000005 0.016915 4697900.0 561.52 496.66 459.47 323.63 559.96 614.1 354.23 519.81 616.03 607.31 775.08 True False 618.5250970308243 538.5152812284218 490.6523972175632 343.6198900829424 520.6303413571288 609.0989732042063 367.7104164920939 509.4419817669439 590.140401402031 568.9643429558269 679.7500736369366 0.9099301655407935 0.7922254106529893 0.7218129372055457 0.5055091619842534 0.7659143581574723 0.8960631220608504 0.5409494323769545 0.7494548386603685 0.8681726185692665 0.83701990631886 1.0 9.408860592311097 -9.184912129918775 1.1999603000135395 0.9642496506378738 0.7290030686544338 0.2327973378157483 0.125807141020033 0.2927231085343462 0.8746128040616974 0.02844580808986903 0.025106075067326088 6.532627128368618e-10 9.184912129918775 -0.23524658198344006 ERDAEQS(ph)GSPR ddPTM_A549_MK2206_60min_R1 2 ERDAEQSGSPR 11 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 ERDAEQS(0.5)GS(0.5)PR;ERDAEQS(0.876)GS(0.124)PR 93.01100000000001 0.0002423 162958100.0 576.89 669.59 654.97 680.37 547.45 256.19 430.16999999999996 159.15 348.6 1000.4300000000001 1130.51 True False 674.2549283936428 703.6692709498714 747.854594710079 847.0606805429704 466.9208302026301 283.2998557548414 508.3263207893293 181.70999987643387 269.6426565998104 774.4321681711891 849.7731665112767 0.7934528353746214 0.8280671815500702 0.880063791353142 0.9968079882076739 0.5494652556747142 0.3333829154878144 0.5981906005296105 0.213833534686015 0.31731133345481105 0.9113398712630593 1.0 9.730933977821874 -6.771767381901245 24.894785815891808 0.5950312930030515 0.8716647454361922 0.2947594825243621 0.2297797992980756 278.71810107008565 671827.7412910719 0.04326799934490019 0.08241414778474611 1.6913466131601113e-07 6.771767381901245 0.27663345243314075 ERDAEQS(ph)GSPR ddPTM_A549_PD325901_60min_R1 2 ERDAEQSGSPR 11 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 ERDAEQS(0.5)GS(0.5)PR;ERDAEQS(0.595)GS(0.405)PR 65.395 0.004735100000000001 6909700.0 281.22 316.86 194.26 313.71 267.68 368.53999999999996 290.07 270.78999999999996 122.81 276.84000000000003 373.06 True False 309.76924737677786 343.56290422026683 207.44365178027675 333.0871542128969 248.87908024586812 365.53873242904746 301.1087725823947 265.38888101935447 117.64872278327914 259.36027515418994 327.1759850221855 0.9467970192120693 1.050085947466377 0.6340430266182593 1.0180672465624596 0.7606887168964797 1.117254166451919 0.9203266326591079 0.811150246865945 0.359588503341104 0.7927240599171818 1.0 8.353923046975837 -8.525116567281566 24.975174346896612 0.691677465298847 0.9161930292753171 0.18286711392911326 0.18805981518526874 104.55526686113916 1166877.0315234594 0.042341224109403656 0.04816117289736579 2.984581431583978e-09 8.525116567281566 0.2245155639764701 ERDAEQSGS(ph)PR ddPTM_A549_MK2206_60min_R1 3 ERDAEQSGSPR 11 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 ERDAEQS(0.006)GS(0.994)PR;ERDAEQS(0.003)GS(0.997)PR;ERDAEQS(0.005)GS(0.995)PR 140.03 1.3663e-09 994350000.0 7636.0199999999995 8035.23 8005.27 6586.790000000001 4875.41 4027.75 3365.9399999999996 3417.59 4993.22 11282.39 11212.32 True False 8924.79349323515 8444.188885757754 9140.537660342847 8200.55384569224 4158.243647416573 4453.963831595933 3977.4877285669286 3902.0438484304223 3862.263642533862 8733.690263039838 8427.991499710499 1.0589466652335515 1.0019218560018495 1.084545192132292 0.9730140147832291 0.4933848886249362 0.5284727484299108 0.47193779546450126 0.4629862107198918 0.45826620051367284 1.0362718404900906 1.0 13.0409731437471 -6.635673011414918 6.265142856719253 0.6654664460792349 1.0409331067606753 0.4804890759230128 0.196246122430251 0.18585702098899975 9.557583534319427 0.03430750650259205 0.07191756296953694 2.3138062432858437e-07 6.635673011414918 0.3754666606814404 ERDAEQSGS(ph)PR ddPTM_A549_PD325901_60min_R1 4 ERDAEQSGSPR 11 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 ERDAEQS(0.022)GS(0.978)PR;ERDAEQSGS(1)PR;ERDAEQS(0.001)GS(0.999)PR;ERDAEQS(0.006)GS(0.994)PR 148.18 4.1403e-12 2239130000.0 7412.18 6700.110000000001 7429.389999999999 7095.09 9027.880000000001 8188.9400000000005 7799.4 8491.66 8559.61 8026.24 8659.38 True False 8164.659057041485 7264.751783738093 7933.593081951351 7533.3375951814805 8393.792853295228 8122.251987674403 8096.210434995437 8322.2871797216 8199.879358545595 7519.461836633314 7594.331156332523 1.0750991613308032 0.9566019224326805 1.0446730487036946 0.9919685407581702 1.1052708501256328 1.069515118642367 1.0660860408022137 1.095855185717319 1.0797368707984423 0.9901414202043614 1.0 12.8907071947571 -6.718515825819897 24.999436589197717 1.0514790088310428 1.0147359482545604 0.15804428124459136 0.04374539762949057 236.5697729472627 137781.24040560934 0.006491809651125541 0.01351369170470087 1.9119836500830327e-07 6.718515825819897 -0.03674306057648247 ERDEIRHDR ddPTM_A549_MK2206_60min_R1 2 ERDEIRHDR 9 2 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 0 ; 53.327 0.0073593999999999994 13731700.0 546.06 514.53 498.4 530.35 628.0899999999999 300.031 307.55 364.85 585.78 724.97 991.8499999999999 False True 638.2215781147754 540.7173792646802 569.0806143846331 660.2857738083159 535.6987930257922 331.7800812755406 363.4278540083184 416.56860480626403 453.1017652984419 561.1987734864679 745.5462713325932 0.8560455637099693 0.7252633405277438 0.7633069016192054 0.8856402334735277 0.7185319189757081 0.445016082881771 0.48746518892613544 0.5587427914590563 0.6077446601517643 0.7527350012540179 1.0 9.542154084001057 -10.731572142382392 1.0208265934106413 0.9970947069753091 0.6671811400865786 0.15236495637026104 0.15059690699020328 0.41991552136254867 0.7878255914825857 0.0975495061766696 0.026058569728086182 1.8553585828460217e-11 10.731572142382392 -0.3299135668887305 ERDEIRHDR ddPTM_A549_PD325901_60min_R1 2 ERDEIRHDR 9 2 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 0 ; 51.268 0.0087956 21829000.0 602.13 890.0 636.49 565.64 540.66 826.5699999999999 879.5 805.71 877.62 715.4100000000001 748.0999999999999 False True 663.2577943353219 965.0034234552718 679.6860389252981 600.5782981383543 502.68590677574355 819.8386879684101 912.9698537808665 789.639481982733 840.7366834057607 670.2388905073657 656.0884425966245 1.0109274165999984 1.4708435034094542 1.0359670965019299 0.915392284249703 0.7661861940232413 1.2495856270897037 1.3915347299330152 1.2035564578116156 1.2814380330772894 1.0215678969358726 1.0 9.357746497141003 ERDFTS(ph)LENTVEER ddPTM_A549_MK2206_60min_R1 1 ERDFTSLENTVEER 14 1 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 1 ERDFT(0.201)S(0.799)LENT(0.001)VEER 41.348 0.026452 3535900.0 119.53 128.69 123.2 181.54 177.41 140.6 0.0 0.0 127.92 0.0 243.28 True False 139.7037417720746 135.23977132056768 140.67161254451614 226.01730814964026 151.31322401360586 155.47819867727344 0.0 0.0 98.94632424626425 0.0 182.8668618135738 0.7639642327022463 0.7395531917556489 0.7692569946758632 1.2359664616548012 0.8274502143962216 0.8502262090316718 0.0 0.0 0.54108395181592 0.0 1.0 7.514649850816818 -7.562333310244408 24.999983813825008 0.6432552654085353 0.8715535485431449 0.15391475979817382 0.3757711838195819 346.5378979228898 219578.98753993903 0.0604573379492741 0.089672793898606 2.7394708889536512e-08 7.562333310244408 0.22829828313460965 ERDFTS(ph)LENTVEER ddPTM_A549_PD325901_60min_R1 1 ERDFTSLENTVEER 14 1 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 1 ERDFT(0.154)S(0.844)LENT(0.002)VEER 46.621 0.009270100000000002 3623200.0 141.95 0.0 116.07 126.92 207.33 194.06 0.0 207.69 253.77 0.0 215.46 True False 156.3606595019331 0.0 123.94720818561066 134.75956014376615 192.76785604967057 192.4796397003879 0.0 203.54746002034693 243.10492940894665 0.0 188.95978591347253 0.8274811423290507 0.0 0.6559449016436117 0.7131652880125221 1.020152807211275 1.0186275284442117 0.0 1.0771998869301975 1.2865432093592017 0.0 1.0 7.5619354250873645 -7.4568562231601625 0.48921455276358145 1.1360414642669152 0.4473350879401782 0.0 0.49700588709801446 1.0153421141677723 0.46945763037239646 0.10152548363966726 0.2830508585185079 3.492559204505848e-08 7.4568562231601625 -0.688706376326737 ERDFTSLENTVEER ddPTM_A549_MK2206_60min_R1 1 ERDFTSLENTVEER 14 1 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 0 73.887 0.0045579999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ERDGNERDSS(ph)EPR ddPTM_A549_PD325901_60min_R1 1 ERDGNERDSSEPR 13 2 K7EQ21;Q9P0U4;Q9P0U4-2;K7EJR0;K7EQZ1;A0A669KB29 K7EQ21 CXXC1 CXXC-type zinc finger protein 1 1 ERDGNERDS(0.442)S(0.558)EPR 44.806999999999995 0.018375 1890100.0 186.51 217.17 105.6 128.59 225.95 162.42 248.79 227.5 162.82 175.75 179.83 True False 205.4443578985948 235.47167805818134 112.76665102438598 136.53271225092095 210.08005148518345 161.09730537017938 258.25783959311167 222.96233402970262 155.977241621802 164.65311500631736 157.71205003629333 1.302654793031459 1.4930481089047645 0.7150160751726685 0.8657088169198326 1.3320481943950317 1.0214647855576477 1.6375276304738942 1.4137304916041205 0.9890001530378172 1.0440109995934155 1.0 7.301149083659971 -8.810752527944132 24.877629829129006 0.9948054059723468 1.2136138016778037 0.11670062948270432 0.25740468776628667 164.15665190571514 82813.37312831997 0.045953572313954805 0.04892097731849799 1.5461352157912465e-09 8.810752527944132 0.21880839570545696 ERDHS(ph)PT(ph)PSVFNSDEER ddPTM_A549_PD325901_60min_R1 1 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(1)PT(0.656)PS(0.342)VFNS(0.002)DEER 88.755 3.7377e-06 30557000.0 1551.5 1510.3 1240.8 1133.1 1544.4 1407.5 1528.7 1394.1 1285.1 1646.4 1662.4 True False 1709.007137846067 1637.57828139831 1325.0081495365355 1203.0890135431885 1435.9266718907602 1396.037786655137 1586.8755150367374 1366.2935818497076 1231.0917160556307 1542.4460230236175 1457.9353388218549 1.172210517393111 1.12321735936631 0.9088250447425626 0.8252005294798563 0.9849042228794045 0.9575443776424702 1.0884402571098097 0.9371427836805148 0.8444076244495626 1.057966002984779 1.0 10.509711020493125 -5.700393792736593 5.19347863532185 0.9349629153025497 1.1570423102416658 0.4560485863158801 0.07835867598821054 0.11611394214154395 6.113175883390619 0.011051998172133367 0.04438075803612939 1.9934539482377637e-06 5.700393792736593 0.2220793949391161 ERDHS(ph)PTPS(ph)VFNSDEER ddPTM_A549_MK2206_60min_R1 2 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(0.987)PT(0.217)PS(0.724)VFNS(0.072)DEER;ERDHS(1)PT(0.132)PS(0.622)VFNS(0.246)DEER 69.922 0.00040113 41180000.0 2432.53 2627.2 1879.3200000000002 1919.9099999999999 3254.5 2194.9 2205.8999999999996 2366.7 3532.3999999999996 2913.51 3521.4 True False 2843.081594351416 2760.913258321511 2145.8358351230518 2390.2880361880343 2775.7673612100793 2427.162861143297 2606.6834763679053 2702.1869727147723 2732.317040083675 2255.346067479426 2646.93919430417 1.074101588910435 1.0430588145971 0.8106857308020448 0.90303851381686 1.048670618192941 0.9169696328371275 0.984791597017835 1.020872326243643 1.0322553105727648 0.852058132779402 1.0 11.370109338171853 -8.072607655838802 4.699285077736331 1.015853622743639 0.9625099686746327 0.0 0.08657543604572963 0.39911496744914216 16.598156063916626 0.011588484701270368 0.015208395195185681 8.460428200236175e-09 8.072607655838802 -0.05334365406900632 ERDHS(ph)PTPS(ph)VFNSDEER ddPTM_A549_PD325901_60min_R1 1 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(0.966)PT(0.072)PS(0.539)VFNS(0.423)DEER 75.646 0.00013656 37335000.0 834.76 1033.8 971.52 868.87 1302.3 818.92 481.82 689.28 960.31 1023.7 948.3 True False 919.5042206821672 1120.9219541214159 1037.453189424351 922.5381265530579 1210.8309406911021 812.2509870320608 500.1559237620206 675.5317696703003 919.951510267981 959.063407294265 831.6651117689871 1.1056183644957074 1.3478044687207897 1.2474410369549396 1.1092663543271402 1.4559116687191713 0.9766563193980428 0.6013910126615359 0.8122641675246126 1.1061561886505074 1.1531846096733531 1.0 9.699858902214567 -7.295789269226715 24.042652765855248 0.9894874893454843 1.2501465520473745 0.44320622949763266 0.1693113849369838 343.29950007350135 240286.23898073475 0.02669270523980038 0.042672859552651723 5.060701606027425e-08 7.295789269226715 0.2606590627018902 ERDHS(ph)PTPSVFNR ddPTM_A549_PD325901_60min_R1 2 ERDHSPTPSVFNR 13 1 H0Y8P7 H0Y8P7 FIP1L1 1 ERDHS(1)PTPSVFNR;ERDHS(0.999)PT(0.001)PSVFNR 132.59 9.406e-09 23968000.0 3547.8 3944.7 3594.3 3975.7 4978.8 3369.5 4286.799999999999 4286.5 4332.9 4516.799999999999 4399.4 True False 3907.9700442476815 4277.133712925853 3838.2308122817285 4221.269959530184 4629.106263927559 3342.059909154164 4449.936519826971 4201.0023948058015 4150.803281065629 4231.60847715809 3858.3016900943585 1.0128731131318318 1.1085534663882781 0.9947980019643982 1.0940746210613066 1.1997782018477539 0.8661997369812806 1.153340738297254 1.088821645438271 1.0758109692982865 1.0967541724438354 1.0 11.91375024033165 -10.683962528561855 0.9507369934823806 1.0000551254519856 1.0673063493286474 0.0 0.08807116578737213 1.1497950860918575 1.85208875115021 0.05209359974681804 0.01379920400799881 2.07031997072454e-11 10.683962528561855 0.06725122387666183 ERDHS(ph)PTPSVFNS(ph)DEER ddPTM_A549_PD325901_60min_R1 1 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(0.732)PT(0.226)PS(0.079)VFNS(0.963)DEER 63.165 0.0086785 6678700.0 189.44 224.5 398.39 112.76 276.81 177.16 175.9 253.48 245.03 269.9 246.76 True False 208.67180934164284 243.41940288281856 425.4271411136852 119.72492910345943 257.36782054265836 175.71726769721073 182.59397075617338 248.42414254878688 234.7322412147779 252.8584679385779 216.41008434052017 0.9642425397020723 1.1248061920247643 1.9658378786280484 0.5532317473481174 1.1892598319849614 0.8119643233478921 0.8437405831276452 1.1479323771155356 1.0846640623522326 1.1684227595452825 1.0 7.757623917632074 -6.2841812913895625 24.97920801877473 1.002772113322751 1.328946916890539 0.24425094514854306 0.29140749867645865 838.964847706453 921498.734869998 0.03729038591644977 0.0867077513726779 5.197789753018473e-07 6.2841812913895625 0.32617480356778805 ERDHS(ph)PTPSVFNS(ph)DEERYR ddPTM_A549_MK2206_60min_R1 2 ERDHSPTPSVFNSDEERYR 19 2 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(0.989)PT(0.011)PS(0.002)VFNS(0.998)DEERYR;ERDHS(0.999)PT(0.001)PS(0.008)VFNS(0.992)DEERYR 78.837 0.00010105 64658000.0 308.96 358.76 325.48 127.12 476.71000000000004 441.71000000000004 355.97 362.35 436.48 875.01 757.88 True False 361.1048946532266 377.0193516121444 371.63795820608055 158.26440570663365 406.58659049391866 488.45145901663176 420.6451412496866 413.71422215033493 337.61797691533326 677.3446332791625 569.6774795760908 0.6338760221343706 0.6618119289052686 0.6523655428377199 0.27781404633443046 0.7137136451250775 0.8574175327767897 0.7383917327444603 0.7262253415005777 0.5926475751973942 1.18899668244423 1.0 9.15400156465789 -14.999999988584104 0.26293565544617237 3.4609145735883806 0.6135653969587618 0.5784715010078185 0.1443037231293879 29.111549993289472 0.37909772676771175 37.47897896806902 0.06611415271874475 1.0000000262860717e-15 14.999999988584104 -2.847349176629619 ERDHS(ph)PTPSVFNS(ph)DEERYR ddPTM_A549_PD325901_60min_R1 5 ERDHSPTPSVFNSDEERYR 19 2 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(0.992)PT(0.008)PS(0.009)VFNS(0.988)DEERY(0.003)R;ERDHS(0.741)PT(0.258)PS(0.001)VFNS(1)DEERYR;ERDHS(0.998)PT(0.002)PS(0.003)VFNS(0.997)DEERYR;ERDHS(0.934)PT(0.065)PS(0.011)VFNS(0.99)DEERY(0.001)R;ERDHS(0.937)PT(0.063)PS(0.003)VFNS(0.997)DEERYR 100.08 2.5264e-08 116130500.0 1750.0700000000002 1309.4699999999998 1584.21 1319.516 1737.71 1281.11 1349.6399999999999 1793.31 1829.3650000000002 1452.15 1642.7000000000003 True False 1927.7358180665583 1419.8236324853644 1691.7240172286236 1401.0195064817349 1615.659244374057 1270.6770649106668 1401.001288751346 1757.5410252255203 1752.483150838152 1360.4610011745312 1440.6583139332656 1.338093703012396 0.98553808266235 1.1742715124517638 0.972485628918276 1.1214728910722809 0.8820114059117055 0.9724729834976286 1.2199568823693565 1.2164460746098402 0.9443328706167802 1.0 10.492512491620543 -11.25384975194699 1.763018010544351 0.9999229874497462 1.1090973796268717 0.10746737424593533 0.1309130961837551 0.7940662173901607 4.456760127985639 0.09777160348419744 0.0198941785390598 5.57378545663784e-12 11.25384975194699 0.10917439217712555 ERDHS(ph)PTPSVFNSDEER ddPTM_A549_MK2206_60min_R1 4 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERDHS(1)PTPSVFNSDEER;ERDHS(0.996)PT(0.004)PSVFNSDEER;ERDHS(0.75)PT(0.25)PSVFNSDEER;ERDHS(0.928)PT(0.071)PSVFNSDEER 201.61 7.125e-49 864130000.0 2878.0699999999997 3357.41 2721.6899999999996 2702.05 3870.1099999999997 3013.88 2787.4 3240.81 4010.9 4564.650000000001 5111.209999999999 True False 3363.8178539442406 3528.287828342428 3107.666567745811 3364.052371299635 3300.8219457037176 3332.806781148373 3293.834499309986 3700.2047420643776 3102.437554091163 3533.4923947128914 3841.9554947803213 0.8755483655430996 0.9183572878800803 0.8088762537639712 0.8756094066862656 0.8591515310857225 0.8674766757908369 0.8573328097592458 0.9631045302558746 0.8075152245532602 0.9197119538509732 1.0 11.907625091580256 -10.978130491200982 1.1928445988363023 1.0015088060173185 0.865670051721999 0.29947093120795887 0.04743483096849722 0.2794328254647068 0.6940237425192587 0.03169176170188485 0.006959878621331166 1.051645841376893e-11 10.978130491200982 -0.13583875429531955 ERDHS(ph)PTPSVFNSDEER ddPTM_A549_PD325901_60min_R1 4 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERDHS(1)PTPSVFNSDEER;ERDHS(0.996)PT(0.004)PSVFNSDEER;ERDHS(1)PTPSVFNSDEER;ERDHS(0.984)PT(0.013)PS(0.003)VFNSDEER 232.29 9.896399999999998e-65 1026140000.0 3627.9600000000005 4021.8599999999997 4160.77 4134.92 4562.740000000001 4206.23 4090.21 4229.29 4376.21 4531.36 4838.59 True False 3996.267828437007 4360.7962569188985 4443.144872942563 4390.324617315329 4242.2688829984745 4171.975857451113 4245.86517979879 4144.933493136182 4192.293112380213 4245.249156273262 4243.474104349153 0.9417443656227846 1.0276476654940587 1.0470536083603683 1.0346061998624354 0.9997159823953107 0.9831510113789169 1.0005634712009168 0.976778316824892 0.9879388937671413 1.00041830158037 1.0 12.05103015814874 -6.98399159435848 22.68284071464215 0.99249174426425 1.0163862100532852 0.12050479100112077 0.026128927190825775 116.71458529749745 165373.3100042448 0.0036254043165095877 0.006849065357086813 1.0375484970686178e-07 6.98399159435848 0.023894465789035202 ERDHS(ph)PTPSVFNSDEERYR ddPTM_A549_PD325901_60min_R1 1 ERDHSPTPSVFNSDEERYR 19 2 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERDHS(0.911)PT(0.086)PS(0.001)VFNS(0.001)DEERYR 40.086 0.021263 9565600.0 2273.8 2310.6 2231.2 2589.1 2482.1 2812.2 1991.6 2389.5 2820.5 2645.6 2809.0 True False 2504.6345021169104 2505.322371051405 2382.6226492955507 2749.0228267272696 2307.7658587801457 2789.298375581937 2067.3914278453362 2341.8395479735145 2701.9641935529585 2478.5563644990784 2463.51080771811 1.0166931252219236 1.0169723482447492 0.9671654948015089 1.115896393924743 0.9367792710914766 1.1322452358817114 0.8392053411611824 0.9506106247379136 1.0967941301851736 1.006107363821515 1.0 11.266500085602672 -8.75862899896537 24.998875083321213 1.045708337285681 0.9978322578232064 0.03592390275561019 0.08037164859843796 158.71099455447518 1411766.91063044 0.01355161091026205 0.01502604709941789 1.743295467593868e-09 8.75862899896537 -0.04787607946247463 ERDKEVS(ph)DDEAEEK ddPTM_A549_MK2206_60min_R1 4 ERDKEVSDDEAEEK 14 2 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK 155.87 1.9835000000000001e-19 449739000.0 25126.4 24129.3 20663.899999999998 20170.2 27312.1 18689.4 14503.7 17541.7 25405.9 29472.1 29777.3 True False 29367.12203849961 25357.37830542678 23594.351740735598 25111.899905474693 23294.526270120095 20667.099902980335 17138.83455106632 20028.2896942032 19651.50421488561 22814.332140737584 22382.774598328386 1.3120411819137399 1.132897004972768 1.054129890692716 1.1219297140824591 1.040734524121947 0.9233484352973745 0.7657153707988598 0.8948081751982158 0.8779744498858172 1.019280788470319 1.0 14.45010126533365 -5.700035181197829 0.665376501626124 0.9250499669424076 1.3806608239462388 0.686700042842493 0.07910843434263333 0.934018839974272 0.3935738810288318 0.014742503908019849 0.28568961913887264 1.995100689901032e-06 5.700035181197829 0.4556108570038312 ERDKEVS(ph)DDEAEEK ddPTM_A549_PD325901_60min_R1 2 ERDKEVSDDEAEEK 14 2 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK 176.46 2.1214e-23 230440000.0 13432.0 12759.099999999999 12850.2 13849.900000000001 13734.4 12545.3 13432.3 12311.599999999999 12819.7 14478.4 13655.0 True False 14795.60675188422 13834.354135065338 13722.291846529972 14705.376867594929 12769.743125107787 12443.13523618096 13943.473526936586 12066.035479736642 12280.93259070762 13564.231353100804 11975.52156617687 1.2354874624978567 1.1552193412718217 1.145861728919315 1.2279529360231074 1.066320414901517 1.039047457550809 1.1643312109526747 1.0075582439611994 1.025502941382807 1.1326630976483743 1.0 13.547800870128924 -6.910008805117921 0.37502144131051685 0.9990631114676032 1.2459509521060412 0.4117279083987475 0.06253468159719067 0.8369410476152516 0.17923432661916072 0.01610501674729769 0.07949436113612958 1.2302438279401134e-07 6.910008805117921 0.24688784063843805 ERDKEVS(ph)DDEAEEKEDK ddPTM_A549_MK2206_60min_R1 3 ERDKEVSDDEAEEKEDK 17 3 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ERDKEVS(1)DDEAEEKEDK;ERDKEVS(1)DDEAEEKEDK;ERDKEVS(1)DDEAEEKEDK 133.15 1.0093e-12 77808000.0 11916.3 12890.6 12924.3 12126.599999999999 13385.300000000001 11359.9 10676.6 12754.5 12549.2 15455.7 14969.0 True False 13927.480114436317 13546.676479795704 14757.160081242611 15097.617544383764 11416.34010139969 12561.997077908669 12616.400019851113 14562.489434018064 9706.826236954505 11964.246635550164 11251.784176617015 1.237801925083119 1.2039580805280496 1.3115395611578047 1.3417976480351443 1.0146248739044115 1.1164449016018707 1.1212799518559897 1.2942382475022243 0.8626921814876989 1.063319954217906 1.0 13.457866164873309 -8.76413727432993 24.99974461521427 0.9351601886334897 1.20115669150563 0.4869912990547768 0.10278419011976873 36.502361097972845 338243.9807706936 0.018076056694566398 0.019670291828941342 1.7213244027427537e-09 8.76413727432993 0.2659965028721403 ERDQRPS(ph)SPIR ddPTM_A549_MK2206_60min_R1 2 ERDQRPSSPIR 11 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 ERDQRPS(0.617)S(0.383)PIR;ERDQRPS(0.984)S(0.016)PIR 130.2 1.9687e-08 139308000.0 2228.74 2081.55 2033.5900000000001 2270.13 2734.2 2198.35 2113.69 2187.8 2773.5 3248.3999999999996 3198.2999999999997 True False 2604.896824538557 2187.4920039811 2321.983640863656 2826.3119519100087 2332.0028019728375 2430.9779378533726 2497.7201129534783 2497.9273498564994 2145.306678369402 2514.58418388822 2404.0738414105276 1.0835344487631053 0.9099104887300992 0.9658537108416324 1.1756344182222556 0.9700212871184504 1.0111910441266063 1.0389531593954726 1.0390393617822096 0.8923630553338991 1.0459679484773452 1.0 11.231265493939436 -8.740187900177089 24.970599498219908 0.949171434470848 1.0217992702114322 0.025058977330727705 0.07488826400313404 305.32973147357944 358763.7713046157 0.012299967088575418 0.013940380642471745 1.818913724139847e-09 8.740187900177089 0.07262783574058429 ERDQRPS(ph)SPIR ddPTM_A549_PD325901_60min_R1 3 ERDQRPSSPIR 11 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 ERDQRPS(0.5)S(0.5)PIR;ERDQRPS(0.887)S(0.113)PIR;ERDQRPS(0.5)S(0.5)PIR 134.4 1.1707e-08 328535000.0 2858.7200000000003 2986.7799999999997 2293.84 2889.3199999999997 3369.27 2396.2 2463.6800000000003 2630.15 2968.35 3190.74 3267.92 True False 3148.9351499215654 3238.486432705322 2449.513776380469 3067.7867342781788 3132.6240985504915 2376.6861416575775 2557.4366905774245 2577.68959493724 2843.600572215183 2989.276131864904 2865.986557051679 1.0987264201130669 1.1299726527806342 0.8546843216530481 1.0704121157616655 1.0930351682364867 0.829273304094818 0.8923407837642936 0.8994074269451501 0.9921890824011662 1.0430181971753756 1.0 11.48481612729761 -5.726477175575341 24.999788837642836 0.9760221670854121 1.1143498210057161 0.31548219739272554 0.0839615582523219 169.24066151107002 121013.5781345619 0.011152013198666474 0.043187777590411175 1.8772530751557634e-06 5.726477175575341 0.138327653920304 ERDQRPSS(ph)PIR ddPTM_A549_MK2206_60min_R1 1 ERDQRPSSPIR 11 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 ERDQRPS(0.114)S(0.886)PIR 119.17 2.9433999999999996e-06 29140000.0 1200.6 1083.6 1346.1 1529.0 1430.2 1073.5 1089.2 1184.1 1684.1 1999.0 1544.6 True False 1403.2319281481875 1138.7506115701854 1536.9972211540035 1903.6050686394185 1219.8194745744836 1187.0970574683715 1287.093541166835 1351.9498011541637 1302.6540389550787 1547.4245116342047 1161.0331912086738 1.208606212788264 0.9808079736159037 1.323818503029994 1.6395785090843984 1.0506327328201628 1.0224488554307085 1.1085760087762246 1.1644368235043645 1.1219782938323866 1.332799547292257 1.0 10.181193500713707 ERDQRPSS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 ERDQRPSSPIR 11 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 ERDQRPS(0.472)S(0.528)PIR;ERDQRPS(0.134)S(0.866)PIR 125.29 6.944e-07 47801700.0 1948.83 2037.15 1952.93 1964.7799999999997 2078.16 2118.03 1965.8899999999999 2339.8999999999996 2202.6 1832.5 2154.5 True False 2146.6737869471795 2208.827779878546 2085.4675737221028 2086.1399982608646 1932.1972108627956 2100.7814659106093 2040.7030197262861 2293.2288588839597 2110.032381747827 1716.7956372635938 1889.510158500774 1.1361006858256064 1.168994921747938 1.103708050649916 1.1040639230625284 1.0225915971766415 1.1118127396454263 1.080016961298306 1.2136631542132141 1.1167086730150346 0.9085929649755258 1.0 10.883796559586658 -10.512709111831231 0.8921697119769495 1.001884061599169 1.1159880370017734 0.5319071066606831 0.054902188426076255 0.4130721590091433 0.6047384732546723 0.029068903897379275 0.008887357643365967 3.0710782918145434e-11 10.512709111831231 0.11410397540260431 ERDSELS(ph)DTDSGCCLGQSESDK ddPTM_A549_MK2206_60min_R1 2 ERDSELSDTDSGCCLGQSESDK 22 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 ERDS(0.008)ELS(0.933)DT(0.059)DSGCCLGQSESDK;ERDS(0.001)ELS(0.768)DT(0.215)DS(0.015)GCCLGQSESDK 205.32 1.5699e-61 64470000.0 4685.1 5203.1 5086.0 3958.0 7203.5 5701.0 4819.4 4946.6 6455.2 6648.6 7050.4 True False 5475.830340302411 5467.915565763044 5807.271277608842 4927.71017768137 6143.87469241875 6304.276035982475 5695.022596675951 5647.795698327161 4993.107506836185 5146.676642346759 5299.591098859015 1.0332552527460732 1.0317617838365432 1.0957961037520667 0.9298283746348449 1.1593110822722732 1.1895778218322854 1.0746154732394488 1.0657040501753263 0.9421684453940579 0.9711459896320722 1.0 12.371665334450004 -8.714353452842087 8.118886465585176 0.9727199941369187 1.0742286368574996 0.3223661627545076 0.06542633596142128 0.22226238261060371 33.92361773048623 0.01153502197355482 0.013044957987816304 1.930396614124509e-09 8.714353452842087 0.10150864272058091 ERDSELS(ph)DTDSGCCLGQSESDK ddPTM_A549_PD325901_60min_R1 2 ERDSELSDTDSGCCLGQSESDK 22 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 ERDS(0.001)ELS(0.988)DT(0.01)DS(0.001)GCCLGQSESDK;ERDS(0.009)ELS(0.977)DT(0.014)DSGCCLGQSESDK 223.57 8.424899999999998e-88 84378000.0 5768.9 6375.7 6106.4 4991.9 6337.0 4935.4 5993.0 6239.5 4854.7 5200.200000000001 6868.5 True False 6354.554481160284 6913.002614521095 6520.817024766198 5300.238325572534 5891.910981463187 4895.207738726656 6221.0668944954305 6115.048277706943 4650.673841674013 4871.858484528315 6023.718043008849 1.0549222981204116 1.1476305107846727 1.0825236138557788 0.8798948237167262 0.9781186535285068 0.8126555233454285 1.032761966957538 1.0151617711928087 0.7720603468602922 0.8087793037030697 1.0 12.556438526870979 -6.217688712439002 5.987974167598414 0.9087624912014781 1.1024807052973582 0.4659899578234775 0.08695583338310009 0.15651273561679246 14.754227523627353 0.013896124471025716 0.0369385412749468 6.057749181056189e-07 6.217688712439002 0.19371821409588008 ERDTSPDKGELVS(ph)DEEEDT ddPTM_A549_MK2206_60min_R1 4 ERDTSPDKGELVSDEEEDT 19 2 Q9UPU7 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 ERDTSPDKGELVS(0.999)DEEEDT(0.001);ERDT(0.002)S(0.001)PDKGELVS(0.995)DEEEDT(0.002);ERDTSPDKGELVS(0.978)DEEEDT(0.022);ERDTSPDKGELVS(0.991)DEEEDT(0.009) 119.02 1.4768e-14 111226000.0 7269.72 7738.299999999999 7114.35 6486.1900000000005 9518.8 7715.25 7055.61 7008.25 10249.5 10709.4 11467.7 True False 8496.671008410325 8132.146417048322 8123.271807679208 8075.306841176137 8118.597129478109 8531.672634031542 8337.523007704867 8001.690899365489 7928.004615088221 8290.139101998679 8619.953597581067 0.9856979985129691 0.9434095352126219 0.9423799926206984 0.9368155814019963 0.9418376836455769 0.9897585337844164 0.9672352540325211 0.9282754029686338 0.9197270641123845 0.9617382516218022 1.0 13.07346438776766 -11.019348061177261 1.3288386632788254 0.9997863430106967 0.9470538728874112 0.11880481300705759 0.02387195311430813 0.3473089878411732 1.099589791879121 0.016222862343168075 0.003731139993202477 9.564272445446477e-12 11.019348061177261 -0.052732470123285524 ERDTSPDKGELVS(ph)DEEEDT ddPTM_A549_PD325901_60min_R1 4 ERDTSPDKGELVSDEEEDT 19 2 Q9UPU7 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 ERDTSPDKGELVS(0.978)DEEEDT(0.022);ERDTSPDKGELVS(1)DEEEDT;ERDTSPDKGELVS(0.76)DEEEDT(0.24);ERDTSPDKGELVS(0.982)DEEEDT(0.018) 170.5 1.4803e-34 158477000.0 17219.2 16603.9 17049.3 17049.4 20201.6 17794.800000000003 17309.7 19073.0 19483.8 19585.4 20383.5 True False 18967.28050789494 18003.168924392117 18206.368023769544 18102.5027160032 18782.70930773658 17649.885048647146 17968.43010573129 18692.574052520955 18664.963642739633 18348.774501534717 17876.4587216526 1.0610200153859946 1.007088104233197 1.0184549584038893 1.012644785965176 1.0506951964141698 0.9873255840805304 1.005144832402812 1.045653076125186 1.044108563858454 1.0264211042710618 1.0 14.125773350370745 -11.095491668210961 1.4588913281417635 1.0001331922473884 1.0268060544476385 0.0 0.02279167711190932 0.5958089983305567 2.2846816963831635 0.015171304704051215 0.003388142285078787 8.026169586529613e-12 11.095491668210961 0.026672862200250114 ERDY(ph)AEIQDFHR ddPTM_A549_MK2206_60min_R1 2 ERDYAEIQDFHR 12 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ERDY(1)AEIQDFHR;ERDY(1)AEIQDFHR 116.71 7.6668e-06 28984000.0 317.33 293.15 135.27 140.11 451.5 386.01 156.47 220.57 293.36 441.91999999999996 419.28999999999996 True False 370.8875460263735 308.0700828551125 154.45332003974596 174.4369562897769 385.08494809843324 426.8573219872994 184.8985736195141 251.83647296729498 226.91442839965674 342.0899650732306 315.1687211846982 1.176790465222031 0.9774767042144843 0.4900655098614045 0.5534716631589582 1.221837454716079 1.3543771741775998 0.5866653674403117 0.7990528756174105 0.7199776283214291 1.0854185142083175 1.0 8.299980551882168 -5.519521442137734 24.90762827140153 0.8541766877254018 1.1269621643109236 0.10091493080865166 0.2659811744632275 185.35946322980809 1375140.6179002353 0.03642727899724466 0.14741998234883025 3.0232813003339024e-06 5.519521442137734 0.27278547658552177 ERDY(ph)AEIQDFHR ddPTM_A549_PD325901_60min_R1 3 ERDYAEIQDFHR 12 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ERDY(1)AEIQDFHR;ERDY(1)AEIQDFHR;ERDY(1)AEIQDFHR 118.87 6.0868e-06 43559000.0 1349.28 1290.3 1279.23 1059.08 1275.51 1153.6499999999999 1164.62 1358.99 1314.55 1285.02 1463.81 True False 1486.2579123125633 1399.0381093082442 1366.0462404348996 1124.496966254805 1185.9225778706184 1144.2550568914387 1208.9402514045178 1331.883878342969 1259.3040349707644 1203.8836178971153 1283.7706498561229 1.1577285338928212 1.0897882027954446 1.0640890104381164 0.8759329140145335 0.9237807220499467 0.8913235841773449 0.9417104617090353 1.0374780561405095 0.9809415997412774 0.9377715700479982 1.0 10.326171767597316 -6.003623613169393 4.111832653400576 0.9722677401180562 1.1182878705801116 0.6393414603352359 0.05063513453745494 0.11716737067567193 4.657071301666989 0.007600544504144641 0.023777688372871066 9.916910342032418e-07 6.003623613169393 0.14602013046205542 EREAANEAGDS(ph)S(ph)QDEAEDDVK ddPTM_A549_PD325901_60min_R1 2 EREAANEAGDSSQDEAEDDVK 21 1 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 2 EREAANEAGDS(1)S(1)QDEAEDDVK;EREAANEAGDS(1)S(1)QDEAEDDVK 80.132 4.6791999999999995e-05 10879700.0 1549.27 1392.0500000000002 1407.76 1457.6100000000001 1963.0700000000002 1664.35 1235.73 1706.8400000000001 1825.3 1777.42 1903.6100000000001 True False 1706.5507498877062 1509.3629388999002 1503.299059148577 1547.643259227506 1825.1907354238508 1650.7960854134844 1282.7563813674024 1672.7957372099224 1748.5889886517339 1665.1933978636062 1669.4780379780261 1.0222061692734696 0.9040927191399007 0.9004605181684718 0.9270222333094724 1.0932702880203293 0.9888097045067042 0.7683577454669615 1.0019872673712524 1.0473866375442245 0.9974335450859784 1.0 10.705181399501514 -8.50443640691149 24.979647563934876 1.0224986073532667 0.942737810875824 0.15020302390812856 0.07792066125510176 965.2453061225139 1307400.3465342852 0.01287072972968749 0.015419125580691417 3.1301387795270103e-09 8.50443640691149 -0.07976079647744272 EREAANEAGDS(ph)SQDEAEDDVK ddPTM_A549_MK2206_60min_R1 1 EREAANEAGDSSQDEAEDDVK 21 1 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 1 EREAANEAGDS(0.868)S(0.132)QDEAEDDVK 119.97 2.5276e-15 11522000.0 1042.2 952.68 1067.4 780.96 1574.5 1134.1 942.91 1063.1 1664.9 1574.9 1603.0 True False 1218.0978806563721 1001.1673427747179 1218.773370373511 972.2952350586272 1342.8931357275378 1254.1097092453479 1114.2245417752665 1213.7976806072054 1287.8028082989797 1219.1289961844468 1204.9308594506688 1.0109276155577145 0.8308919428216427 1.011488220103478 0.8069303125839927 1.1144980852592374 1.0408146653469394 0.924720728194516 1.0073587800386978 1.068777347843919 1.011783362192459 1.0 10.234734649715293 -6.7685977207193995 24.999999840079653 1.0283281332818581 0.915935314065716 0.338611223325176 0.07307290491150366 131.73334021090318 460070.7297375867 0.009876251789352348 0.018945094343611787 1.7037359181006002e-07 6.7685977207193995 -0.11239281921614208 EREAANEAGDS(ph)SQDEAEDDVK ddPTM_A549_PD325901_60min_R1 1 EREAANEAGDSSQDEAEDDVK 21 1 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 1 EREAANEAGDS(0.672)S(0.328)QDEAEDDVK 162.82 2.3541e-28 17050000.0 1258.4 1394.6 1640.1 1388.5 1704.1 1505.4 1466.5 1299.6 1779.8 1525.6 1695.3 True False 1386.1518416148822 1512.1278363491265 1751.4070487224956 1474.264491487704 1584.4098948258506 1493.1405215137795 1522.3084599995916 1273.6784584835227 1705.0011954212207 1429.2733556394749 1486.7888473921369 0.9323125096386253 1.0170427623273035 1.177979678684371 0.9915762376571489 1.065658985541184 1.0042720754415018 1.0238901527071291 0.8566639847464455 1.1467675443031695 0.9613156287434187 1.0 10.537984056160834 EREAANEAGDSS(ph)QDEAEDDVK ddPTM_A549_MK2206_60min_R1 1 EREAANEAGDSSQDEAEDDVK 21 1 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 1 EREAANEAGDS(0.319)S(0.681)QDEAEDDVK 98.133 1.6015000000000001e-07 11122000.0 830.47 988.82 1064.0 1047.1 1646.2 846.82 973.46 967.83 1367.5 1400.6 1601.9 True False 970.6330329578757 1039.1467144082965 1214.8911992480932 1303.6395470061052 1404.0461607079535 936.4299303263783 1150.3250813296622 1105.0228663550672 1057.763433448768 1084.2034872410538 1204.1040198091255 0.8061039719074606 0.8630041070480123 1.0089586773746322 1.0826635619178135 1.1660505551094522 0.7776985334496443 0.9553369662464973 0.9177137923102652 0.8784651625168103 0.9004234429953334 1.0 10.233744313288389 -7.281254763184742 24.994089038843605 0.9299515022297645 0.9852760939050774 0.10203294303828747 0.10539207584973452 2153.326317972482 2716086.1181852864 0.016889506011225953 0.027020570135980814 5.232933753576176e-08 7.281254763184742 0.055324591675312895 EREAANEAGDSS(ph)QDEAEDDVK ddPTM_A549_PD325901_60min_R1 1 EREAANEAGDSSQDEAEDDVK 21 1 A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 A0A0C4DH01 POLR3E DNA-directed RNA polymerase III subunit RPC5 1 EREAANEAGDS(0.158)S(0.842)QDEAEDDVK 108.32 1.5140000000000001e-10 17356000.0 1127.7 1188.9 1533.1 1350.8 1334.1 1441.3 1038.6 1515.6 1283.2 1276.2 1462.8 True False 1242.1832738311373 1289.0927754449124 1637.1453852792254 1434.2358481106164 1240.3974183951452 1429.5625306614922 1078.1244913437272 1485.3701690348005 1229.2715664482027 1195.620514202346 1282.8848734532046 0.9682733809835103 1.0048390172182775 1.2761436502657018 1.1179770514013567 0.9668813188640273 1.1143342323566947 0.8403906801408346 1.1578359054437646 0.9582087932327955 0.931978027758668 1.0 10.32517599293028 -6.7594167895600545 24.977773646104072 0.9922816423837348 1.0987630095232181 0.15319256892506972 0.10810789583724309 67.77093687486538 836907.9826906514 0.014459492779117752 0.02895542524400983 1.740136074638081e-07 6.7594167895600545 0.10648136713948331 ERECS(ph)PS(ph)SPLPPLPEDEEGSEVTNSK ddPTM_A549_PD325901_60min_R1 2 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 2 ERECS(0.666)PS(0.666)S(0.666)PLPPLPEDEEGS(0.001)EVTNSK;ERECS(0.978)PS(0.535)S(0.486)PLPPLPEDEEGSEVTNSK 74.83800000000001 2.0577000000000002e-06 2631900.0 544.69 361.23 431.41 540.99 492.02 313.74 559.35 794.22 200.58 490.94 274.03 True False 599.9865278204152 391.6721198367954 460.6880768790753 574.405723622566 457.46221257685306 311.18500546016537 580.6363703380645 778.3786590464637 192.15032013573915 459.9419646156554 240.32604721929295 2.4965522246239873 1.629753097380252 1.9169294473466132 2.390110145232954 1.9035065814544334 1.2948451033949515 2.4160359522255397 3.2388443452249183 0.7995401345756152 1.9138248639190039 1.0 7.908849210101071 -8.804290758452677 24.999970666135393 0.9053376940794708 2.113698012364523 0.29513856435200536 0.572488075299221 71.93776792519733 41968.977772713726 0.0840568030809522 0.08948557949167525 1.5693118044531717e-09 8.804290758452677 1.2083603182850522 ERECS(ph)PSSPLPPLPEDEEGSEVTNSK ddPTM_A549_MK2206_60min_R1 1 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.5)PS(0.25)S(0.25)PLPPLPEDEEGSEVTNSK 81.242 9.182299999999999e-07 2626400.0 1240.5 1256.2 1267.7 1003.1 1438.9 1535.1 1368.7 1410.5 1778.9 1532.3 1577.1 True False 1449.8660726868459 1320.1352143359795 1447.4789222620384 1248.8595450308694 1227.2397160993035 1697.54326308309 1617.3750732602346 1610.4426944750855 1375.9819903195705 1186.152365771432 1185.4625442543052 1.2230382813139484 1.1136034797003123 1.2210245943894837 1.0534787042271698 1.0352412415284513 1.4319670168498664 1.3643409326590041 1.3584931065773207 1.1607131722454447 1.0005819007276697 1.0 10.211234364966415 -9.884885078319389 1.0787867023959694 1.0249619719180882 1.2172111627688704 0.3157607295298296 0.12197230093422283 0.4391013234941704 1.0386220964973705 0.04259037076530938 0.02531932156602065 1.3035116640980596e-10 9.884885078319389 0.19224919085078218 ERECSPS(ph)SPLPPLPEDEEGSEVTNSK ddPTM_A549_MK2206_60min_R1 1 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.118)PS(0.495)S(0.387)PLPPLPEDEEGSEVTNSK 87.749 5.723e-09 20935000.0 1064.9 1519.5 1368.0 1172.3 1824.5 955.74 914.47 1227.1 1736.3 1838.1 1812.0 True False 1244.629085694656 1596.8360596907507 1562.0029704618341 1459.5135526265467 1556.1184669005363 1056.8757724311336 1080.6173619085898 1401.0451828361422 1343.0308223013494 1422.8719333841075 1362.0303913441123 0.9138041952693878 1.1723938539395744 1.1468194692193174 1.0715719428156325 1.1424990784272362 0.7759560866980079 0.7933871143963157 1.0286445821913917 0.9860505542581812 1.0446697389622517 1.0 10.41154317960698 ERECSPSS(ph)PLPPLPEDEEGSEVTNSK ddPTM_A549_MK2206_60min_R1 1 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.093)PS(0.397)S(0.51)PLPPLPEDEEGSEVTNSK 88.84200000000001 5.222e-09 31043000.0 808.81 996.51 732.49 941.79 1411.3 1265.1 967.44 1040.1 914.43 1398.9 1567.1 True False 945.3173544940324 1047.2281025616517 836.3680963695825 1172.5285922785597 1203.6996395378058 1398.9720422945848 1143.2113252538034 1187.53736017266 707.3130650446483 1082.8875184217552 1177.9458202402648 0.8025134418331878 0.8890290916334754 0.7100225511212299 0.9954011229815306 1.0218633309402023 1.1876370018522902 0.9705126548355368 1.0081425985538444 0.600463156192004 0.919301634943515 1.0 10.202057468424467 -4.06271303480144 20.256031890904996 0.8727398608692305 0.910670876639939 0.0 0.161950885413483 0.0 0.0 0.026114896046770242 0.0 8.655396453913709e-05 4.06271303480144 0.037931015770708454 EREDES(ph)EDESDILEESPCGR ddPTM_A549_MK2206_60min_R1 2 EREDESEDESDILEESPCGR 20 1 Q9NSY0 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 1 EREDES(0.995)EDES(0.005)DILEESPCGR;EREDES(0.89)EDES(0.11)DILEESPCGR 72.532 0.00015428 12169000.0 153.87 0.0 0.0 0.0 207.42 0.0 0.0 0.0 119.86 351.23 0.0 True False 179.83949423968153 0.0 0.0 0.0 176.90879276761254 0.0 0.0 0.0 92.71190137708905 271.886899060171 0.0 0.0 EREDES(ph)EDESDILEESPCGR ddPTM_A549_PD325901_60min_R1 2 EREDESEDESDILEESPCGR 20 1 Q9NSY0 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 1 EREDES(0.5)EDES(0.5)DILEESPCGR;EREDES(0.883)EDES(0.117)DILEESPCGR 50.531000000000006 0.0038787 9730500.0 0.0 0.0 0.0 116.27 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 123.45173383167105 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EREDS(ph)GDAEAHAFK ddPTM_A549_MK2206_60min_R1 4 EREDSGDAEAHAFK 14 1 Q9NPI1;Q9NPI1-2 Q9NPI1 BRD7 Bromodomain-containing protein 7 1 EREDS(1)GDAEAHAFK;EREDS(1)GDAEAHAFK;EREDS(1)GDAEAHAFK;EREDS(1)GDAEAHAFK 95.666 1.3709e-05 62312500.0 7176.599999999999 8348.26 7165.429999999999 6921.080000000001 9839.1 7143.2300000000005 7833.099999999999 7580.97 10486.5 11450.5 11310.4 True False 8387.834628975745 8773.150775698514 8181.595719763413 8616.744910699084 8391.781423776958 7899.121857307684 9256.272876711288 8655.595713246932 8111.3244934994555 8863.824097282368 8501.71552884021 0.9866049505563731 1.0319271147026172 0.962346445491988 1.0135301377079322 0.9870691856613734 0.9291209321826449 1.0887535398369197 1.0180998980599525 0.9540809106095778 1.042592411756637 1.0 13.053538271232965 -8.748807895695043 24.98490260832074 0.9783159835482482 1.0021701299825836 0.0 0.04405202879548944 496.37467959093743 981822.0856190386 0.00680239783963305 0.007688770837221012 1.7831673530468523e-09 8.748807895695043 0.023854146434335366 EREDS(ph)GDAEAHAFK ddPTM_A549_PD325901_60min_R1 4 EREDSGDAEAHAFK 14 1 Q9NPI1;Q9NPI1-2 Q9NPI1 BRD7 Bromodomain-containing protein 7 1 EREDS(1)GDAEAHAFK;EREDS(1)GDAEAHAFK;EREDS(1)GDAEAHAFK;EREDS(1)GDAEAHAFK 113.49 1.3776e-06 95631000.0 17238.2 15869.900000000001 16979.4 18549.8 20301.9 16482.1 16754.9 19999.5 16792.2 18820.0 20475.5 True False 18988.20937390787 17207.312168418895 18131.724189426695 19695.57901634756 18875.96458175281 16347.875242222843 17392.516888133086 19600.59428319577 16086.48223044849 17631.701988158715 17957.143304888647 1.0574181567476006 0.9582432949529551 1.0097220856109401 1.0968102599585339 1.0511674524875025 0.9103828467956985 0.9685570022375527 1.0915207363667756 0.895826354856182 0.9818767767676424 1.0 14.132270238109978 -7.244819482812658 24.26289735899446 0.9603402880547272 1.032492191659221 0.18727978427594083 0.05808191301398201 664.1257974899396 969536.8609731372 0.009427691176400053 0.016296813107100915 5.69089427229864e-08 7.244819482812658 0.07215190360449375 EREDSGDAEAHAFKS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 EREDSGDAEAHAFKSPSK 18 2 Q9NPI1;Q9NPI1-2 Q9NPI1 BRD7 Bromodomain-containing protein 7 1 EREDSGDAEAHAFKS(0.972)PS(0.028)K;EREDSGDAEAHAFKS(0.949)PS(0.051)K 106.45 1.2028e-09 28299000.0 4018.9 3468.5 3377.9 3590.9 4736.1 3646.2 3435.8 3843.5 4089.9 3864.4 4695.0 True False 4426.895769442192 3760.8026677018065 3607.1446069628173 3812.7017374743946 4403.452674658011 3616.5065560937574 3566.551249141903 3766.83837733258 3918.0157260103692 3620.4011244973713 4117.544764057152 1.0751299677626884 0.9133604813554387 0.8760425966586407 0.9259648542879749 1.0694365033008517 0.878316269361039 0.8661839648411407 0.9148263329676568 0.9515417440537598 0.8792621166138996 1.0 12.007568619017412 -9.979575040660903 1.0017978949628343 0.9937827676618686 0.9375654754689629 0.0 0.07582184666519341 0.8284368925415244 1.683725658973758 0.02395849641404477 0.012869640374792516 1.0481536700737367e-10 9.979575040660903 -0.05621729219290572 EREDSGDAEAHAFKS(ph)PSKENK ddPTM_A549_PD325901_60min_R1 4 EREDSGDAEAHAFKSPSKENK 21 3 Q9NPI1;Q9NPI1-2 Q9NPI1 BRD7 Bromodomain-containing protein 7 1 EREDS(0.009)GDAEAHAFKS(0.94)PS(0.051)KENK;EREDSGDAEAHAFKS(0.892)PS(0.108)KENK;EREDSGDAEAHAFKS(0.926)PS(0.074)KENK;EREDSGDAEAHAFKS(0.957)PS(0.042)KENK 72.47399999999999 7.6203e-05 69281000.0 7630.4 8917.9 8336.099999999999 11153.5 9854.5 10985.9 10274.900000000001 10186.699999999999 12671.6 11862.8 10341.8 True False 8405.03259079641 9669.442730372768 8901.837875041518 11842.426363563634 9162.353916179423 10896.434472763534 10665.916942141022 9983.518277188445 12139.056718675996 11113.780783481883 9069.824162071614 0.9267029261652896 1.0661113774188316 0.9814785508485837 1.3056952540586781 1.0102019347293139 1.2013942363216343 1.1759783598389904 1.1007400032006944 1.3384004476557951 1.2253579104606824 1.0 13.146858865959839 -6.222942148083839 24.533741566626112 1.160027730631705 0.9988989110074178 0.3614987672215281 0.10482645421945104 512.3950467598885 326541.08078598324 0.01816384897588812 0.04805589059827082 5.984913141559328e-07 6.222942148083839 -0.16112881962428727 EREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A549_MK2206_60min_R1 6 EREESEDELEEANGNNPIDIEVDQNK 26 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK 382.22 0.0 442405600.0 19833.07 21485.469999999998 20551.54 19279.630000000005 28693.62 23375.34 20286.06 22472.5 31459.510000000002 31757.629999999997 30421.45 True False 23180.407343992963 22578.98865113774 23466.057403190935 24003.140215495492 24472.82650820857 25848.902963505094 23971.774514986126 25658.045694144872 24333.981215514326 24583.559326368053 22866.96437569282 1.0137072399794933 0.9874064733812594 1.026199062440266 1.049686343195182 1.0702262926609862 1.1304037798292992 1.048314683188456 1.122057360679624 1.0641544201372404 1.0750687726832664 1.0 14.480977238048819 -6.022094937695876 3.4267738404459895 1.0496972171133203 1.000777787187564 0.24653335348487182 0.0379930308409259 0.34016484632483024 8.301695771724974 0.00644212574832694 0.020710114632834026 9.503970121415495e-07 6.022094937695876 -0.048919429925756264 EREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A549_PD325901_60min_R1 4 EREESEDELEEANGNNPIDIEVDQNK 26 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK 331.15 1.5657999999999993e-232 766830000.0 38504.3 38053.3 39698.5 39709.4 45768.4 39807.2 42538.5 44200.1 42487.5 44343.8 46889.9 True False 42413.2281906325 41260.185139067995 42392.67893647335 42162.159451409294 42553.78547640834 39483.02336123508 44157.32589546036 43318.49433119236 40701.89812926122 41543.92490023977 41122.739559566224 1.0313813876431313 1.0033423254621128 1.030881682264082 1.0252760371263074 1.0347993818546366 0.960126289836405 1.0737933894578824 1.0533951481623833 0.989766211229789 1.0102421517920386 1.0 15.327648758316322 -8.794261609944016 24.998234386279822 0.9951673700590842 1.0255735494673985 0.15016969016300497 0.027475039424914163 212.57600221270832 161902.3348206182 0.0045783967004227825 0.004874217739318964 1.6059735565844463e-09 8.794261609944016 0.03040617940831436 EREES(ph)EDELEEANGNNPIDIEVDQNKESK ddPTM_A549_MK2206_60min_R1 2 EREESEDELEEANGNNPIDIEVDQNKESK 29 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNKESK;EREES(1)EDELEEANGNNPIDIEVDQNKESK 184.78 4.5101e-67 231720000.0 5364.9 5158.9 4813.0 4031.2 6717.7 5965.9 4287.8 4809.5 6823.8 5963.6 8106.2 True False 6270.363960788114 5421.465974556501 5495.555772538607 5018.844180967442 5729.535228883382 6597.207578156086 5066.8377578178115 5491.261353476017 5278.220195369435 4616.41861809992 6093.206820261392 1.0290745326315909 0.8897557779474694 0.901915187625759 0.8236786193238291 0.9403152392318748 1.0827151896795575 0.8315551904408276 0.9012103996234363 0.8662466827513668 0.7576336655353972 1.0 12.57298599490103 -11.013485147165182 1.3212785977365276 0.9996226343299414 0.9112774122161785 0.0 0.10331336858235782 0.6578937111665405 2.0595376304284634 0.05121896787808845 0.011821494310435441 9.694264230355992e-12 11.013485147165182 -0.08834522211376283 EREES(ph)EDELEEANGNNPIDIEVDQNKESK ddPTM_A549_PD325901_60min_R1 2 EREESEDELEEANGNNPIDIEVDQNKESK 29 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNKESK;EREES(1)EDELEEANGNNPIDIEVDQNKESK 259.59 2.9829999999999995e-139 394840000.0 11946.7 13419.599999999999 14168.2 13829.4 15174.7 14269.8 15377.099999999999 14750.0 14751.3 15864.3 15984.900000000001 True False 13159.520189304298 14550.5167880903 15129.739252307814 14683.610629153798 14108.881421873035 14153.591479937102 15962.283955171979 14455.799678848842 14131.35416002756 14862.625390581617 14018.858636629842 0.9387012545315079 1.037924496226197 1.0792418729992295 1.0474184104251558 1.0064215488276609 1.0096108282991896 1.1386293541375876 1.0311680896101854 1.008024585047443 1.0601879779104912 1.0 13.775081274810697 -8.739673348122857 4.729837649645117 1.0036408337956204 1.0397990883493542 0.0 0.04943319909735713 0.3257024602467959 17.787640124440877 0.007870547356626106 0.008714392197358853 1.8210700500746014e-09 8.739673348122857 0.03615825455373378 EREES(ph)EDELEEANGNNPIDIEVDQNKESKK ddPTM_A549_MK2206_60min_R1 2 EREESEDELEEANGNNPIDIEVDQNKESKK 30 3 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNKESKK;EREES(1)EDELEEANGNNPIDIEVDQNKESKK 253.39 1.1551999999999997e-138 28206000.0 2567.3 3531.0 3997.6 2636.6 4638.9 3509.8999999999996 2965.3 2647.5 4994.6 5466.6 5992.1 True False 3000.597475541264 3710.7128178795915 4564.519791460695 3282.567118361473 3956.523955113673 3881.315288316944 3504.0566265350876 3022.791232628705 3863.3310747372716 4231.691263281413 4504.096196453125 0.6661930262289174 0.8238529232128068 1.0134152541091712 0.7287959615397249 0.8784279425979726 0.8617301050038392 0.7779710898036445 0.6711204869489877 0.8577372476590438 0.9395206227197755 1.0 12.137021924838631 -9.989222601426995 0.9321911622450467 0.9843558248293957 0.8130737509489172 0.2875039256037075 0.09624280563633791 0.4173378522661164 0.7350444469700943 0.036451506029556525 0.018611313391127628 1.025126354110053e-10 9.989222601426995 -0.17128207388047845 EREES(ph)EDELEEANGNNPIDIEVDQNKESKK ddPTM_A549_PD325901_60min_R1 3 EREESEDELEEANGNNPIDIEVDQNKESKK 30 3 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNKESKK;EREES(1)EDELEEANGNNPIDIEVDQNKESKK;EREES(1)EDELEEANGNNPIDIEVDQNKESKK 216.53 8.052600000000001e-91 102845000.0 4969.5 4395.1 4875.6 5201.0 5604.6 8138.099999999999 5085.2 7103.8 6931.700000000001 6949.0 7258.7 True False 5473.9999816474565 4765.490501604792 5206.4875353645475 5522.253957671984 5210.952230820351 8071.826011778459 5278.72006872821 6962.109136176704 6640.38475463607 6510.238954076238 6365.925916690441 0.8598906197283105 0.7485934589829952 0.8178680687618385 0.8674706601899836 0.8185694114281266 1.2679736015487426 0.8292148130232319 1.093652239640924 1.0431137342057408 1.0226696067900243 1.0 12.636154652404816 -7.112511670935438 20.60225132605257 1.0271655255946148 0.82051039373105 0.5398404948976603 0.10070194663459853 3.4797545340777365 629.2421627192842 0.013132258356227784 0.022745796969019294 7.717707752618088e-08 7.112511670935438 -0.20665513186356488 EREHCDT(ph)EGEADDFDPGK ddPTM_A549_MK2206_60min_R1 4 EREHCDTEGEADDFDPGK 18 1 Q9H8M2 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 EREHCDT(1)EGEADDFDPGK;EREHCDT(1)EGEADDFDPGK;EREHCDT(1)EGEADDFDPGK;EREHCDT(1)EGEADDFDPGK 157.83 4.9046000000000006e-23 30240900.0 3807.25 3557.43 3477.36 2747.95 5047.709999999999 4314.09 3557.77 3616.2200000000003 5817.77 4964.4400000000005 5727.12 True False 4449.8207216743185 3738.487991987935 3970.5019366704437 3421.197873360162 4305.198545661004 4770.604140338825 4204.170756479186 4128.830259209286 4500.054384069645 3842.9695560466794 4304.918043529081 1.0336597994851604 0.8684225702292816 0.9223176600629335 0.7947184682186275 1.0000651585301013 1.1081753687528937 0.9765971649097169 0.9590961355037918 1.0453287004694276 0.892692849710164 1.0 12.071770056704727 -6.971838602042275 24.59428416296989 1.0198291356549396 0.9026798715056504 0.2348560969431721 0.0744313147066708 123.53172439626697 107883.60714880996 0.008687602334694365 0.016417780725193568 1.0669925767101905e-07 6.971838602042275 -0.11714926414928917 EREHCDT(ph)EGEADDFDPGK ddPTM_A549_PD325901_60min_R1 4 EREHCDTEGEADDFDPGK 18 1 Q9H8M2 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 EREHCDT(1)EGEADDFDPGK;EREHCDT(1)EGEADDFDPGK;EREHCDT(1)EGEADDFDPGK;EREHCDT(1)EGEADDFDPGK 155.76 5.959e-23 47371900.0 4336.450000000001 4039.95 4715.39 4057.35 3646.7700000000004 3799.62 4403.9800000000005 4681.01 3594.73 4843.959999999999 4333.15 True False 4776.683211674237 4380.410764705759 5035.404721343556 4307.963294589584 3390.633455873522 3768.6771544799976 4571.5758688503265 4587.643583368694 3443.6559991103077 4538.111538924614 3800.20002010101 1.25695573559501 1.1526790015093276 1.3250367598307928 1.1336148812701383 0.8922249981419131 0.9917049456727873 1.2029829600203026 1.2072110833910141 0.9061775645742917 1.1941770209253328 1.0 11.891859640169208 -5.80865859556557 0.3346233320924058 0.9608633818509341 1.4184561296493565 0.044939052408242364 0.135096319272755 3.8422162286081596 0.38467299340018185 0.044226836155433324 0.6711106696539454 1.5536078409898009e-06 5.80865859556557 0.4575927477984224 EREHCDT(ph)EGEADDFDPGKK ddPTM_A549_MK2206_60min_R1 2 EREHCDTEGEADDFDPGKK 19 2 Q9H8M2 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 EREHCDT(1)EGEADDFDPGKK;EREHCDT(1)EGEADDFDPGKK 118.01 1.746e-14 16610500.0 4288.9 4325.5 3957.7 4048.8 4543.5 4246.7 3683.3 3755.1 5188.4 5483.299999999999 5466.4 True False 5012.7614664624 4545.649474295717 4518.961371488892 5040.756181757537 3875.157168738055 4696.082975268687 4352.507932592552 4287.396924511448 4013.2356841722767 4244.618721682759 4108.9420150350215 1.2199640316461546 1.1062822151451006 1.0997870875163411 1.2267771517127561 0.9431033960952662 1.1428934645670976 1.0592770393610567 1.043430865858764 0.976707792294818 1.0330198640310044 1.0 12.004551256148021 -7.002736501117237 0.424085873484733 0.984303546028483 1.1925584892982302 0.4028623945089863 0.06827895467171981 0.9689640571116463 0.2808647842424599 0.018382712002287194 0.08220468278172413 9.93718783159816e-08 7.002736501117237 0.20825494326974714 EREHCDT(ph)EGEADDFDPGKK ddPTM_A549_PD325901_60min_R1 1 EREHCDTEGEADDFDPGKK 19 2 Q9H8M2 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 EREHCDT(1)EGEADDFDPGKK 101.47 8.1291e-10 14665000.0 4006.8 3732.7 4359.6 4043.6 4630.1 3692.0 4039.4 3946.7 3541.1 4486.6 4329.3 True False 4413.567386349738 4047.267728911789 4655.468672404484 4293.363988318099 4304.897748977862 3661.933576078698 4193.121577444493 3867.979972373744 3392.2798815069596 4203.315310312052 3796.82354569385 1.1624367930807227 1.0659615018195878 1.2261482832628507 1.130777855923117 1.1338155953705675 0.9644729421865978 1.1043762047356933 1.0187410412476492 0.8934520766323992 1.1070610102698144 1.0 11.890577237090831 -7.641452435982918 0.898202330930051 0.9528793054557717 1.1494689778326734 0.3087760804394418 0.0764341542561657 0.27250860092104656 0.4423596005765234 0.012338685711206469 0.023328925398325793 2.2832189695770915e-08 7.641452435982918 0.19658967237690173 EREKEIS(ph)DDEAEEEK ddPTM_A549_MK2206_60min_R1 4 EREKEISDDEAEEEK 15 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EREKEIS(1)DDEAEEEK;EREKEIS(1)DDEAEEEK;EREKEIS(1)DDEAEEEK;EREKEIS(1)DDEAEEEK 192.18 1.9303999999999996e-34 813680000.0 13544.599999999999 15052.0 13496.2 13526.2 21835.3 16460.699999999997 15222.000000000002 17657.1 24441.1 17713.5 17110.9 True False 15830.59734632345 15818.082507709889 15410.164100838467 16840.119607214194 18623.35629504701 18202.560348271654 17987.64036324053 20160.04799760088 18905.229874416582 13712.008047439967 12861.791293184317 1.2308236843115588 1.2298506597671321 1.1981351391547286 1.3093137047044188 1.4479597647425555 1.415243019680898 1.3985330622471295 1.5674370340843606 1.4698753418922905 1.066104070177705 1.0 13.650803963881348 -10.827379992730902 1.102883445618605 1.0024053440601723 1.3695802885832904 0.568596152628617 0.11026894705136601 0.30248162344564167 0.6598948045204557 0.08380655014633036 0.021247832931093554 1.4880585079404498e-11 10.827379992730902 0.36717494452311805 EREKEIS(ph)DDEAEEEK ddPTM_A549_PD325901_60min_R1 4 EREKEISDDEAEEEK 15 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EREKEIS(1)DDEAEEEK;EREKEIS(1)DDEAEEEK;EREKEIS(1)DDEAEEEK;EREKEIS(1)DDEAEEEK 201.61 2.7271e-39 907400000.0 76011.2 76515.5 77703.3 81128.8 95909.2 82886.3 85919.0 84883.5 83950.6 92056.2 87469.0 True False 83727.80106751186 82963.72971617056 82976.71320590116 86139.94171912674 89172.86866077791 82211.30145366526 89188.69456168078 83190.43200268225 80422.44822807556 86243.75582159053 76710.86751167514 1.0914724834101082 1.0815120778492533 1.0816813301358166 1.1229170587337776 1.1624541809177962 1.0717034511590287 1.162660486770099 1.0844673603778623 1.048384027410921 1.124270375490989 1.0 16.22714335616388 -9.024321899298675 1.2460398921528901 1.014514395716598 1.109958418019942 0.03682284717392725 0.04484845308704414 0.1822432214987059 0.5772509570557396 0.006860192053046034 0.0065325979943509135 9.455360697403624e-10 9.024321899298675 0.09544402230334392 EREKEIS(ph)DDEAEEEKGEK ddPTM_A549_MK2206_60min_R1 3 EREKEISDDEAEEEKGEK 18 3 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK 133.58 3.3301e-13 380328000.0 9819.4 9868.7 9610.5 9961.8 14669.4 10697.9 9945.5 10656.599999999999 15695.099999999999 12495.2 11983.0 True False 11476.67465871923 10370.974677374206 10973.413412005459 12402.441447202202 12511.55069243668 11829.944677308706 11752.468613362797 12167.205684468765 12140.184909924505 9672.525641706718 9007.290386024562 1.274153953837892 1.1513978380740888 1.2182812967850434 1.3769336743539935 1.389047111420902 1.3133744078756124 1.3047729238970212 1.3508175225867072 1.347817644334066 1.073855202527312 1.0 13.136877457896267 -10.728232649963049 0.9110349134034884 0.9941104810935795 1.3040052846316454 0.6814813637365188 0.06949802481060642 0.2707021346794903 0.3871975080599297 0.056605567277070626 0.013569042711582222 1.8696802911633177e-11 10.728232649963049 0.309894803538066 EREKEIS(ph)DDEAEEEKGEK ddPTM_A549_PD325901_60min_R1 3 EREKEISDDEAEEEKGEK 18 3 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK 166.91 2.0054e-24 350358000.0 30575.9 30913.0 32888.6 32576.2 36163.9 33447.4 29266.800000000003 33302.5 33426.1 38559.1 36775.1 True False 33679.94285921209 33518.14699918292 35120.61817121799 34588.3578880819 33623.872422682136 33175.01546385014 30380.564089407482 32638.25551219417 32021.317259393898 36124.47184546281 32251.995836566144 1.0442746870575679 1.0392580716254856 1.088944025330659 1.0724408518268154 1.0425361764607637 1.0286189925101477 0.9419746995924854 1.0119763030351783 0.9928476185368128 1.120069344809545 1.0 14.977100820532558 -7.377732677637306 2.9243418689832223 0.9940786245940016 1.0598557109953255 0.11613466269447859 0.04385485205508257 0.11829228967533902 1.9483415021511759 0.003223326272881562 0.005385689141770008 4.1905142551533125e-08 7.377732677637306 0.06577708640132385 EREKEPS(ph)RER ddPTM_A549_PD325901_60min_R1 1 EREKEPSRER 10 3 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EREKEPS(1)RER 68.972 0.0011289000000000002 670110000.0 3023.8 2616.3 3320.6 2715.9 3623.0 2783.6 2622.2 3443.5 2870.5 2722.3 2978.7 True False 3330.773949996094 2836.7847829056477 3545.9558843899276 2883.654974743575 3368.532978671475 2760.9312844996375 2721.9892559228965 3374.81669112651 2749.862867432642 2550.413513409376 2612.338783535043 1.2750160779257187 1.0859176462047093 1.3573874517115672 1.103859496677297 1.2894701866015794 1.056881022439026 1.0419740628891454 1.2918755838244202 1.0526440463099123 0.9762950844982405 1.0 11.351126290900122 -8.512066851207358 0.3408246979184632 0.9832928641549061 1.2378715482825564 0.373307894159978 0.1028484218187254 0.8960231858125058 0.2976037519326023 0.06608102714369553 0.0752968674699488 3.0756233457739326e-09 8.512066851207358 0.2545786841276503 ERENMDT(ph)DDER ddPTM_A549_MK2206_60min_R1 1 ERENMDTDDER 11 1 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 ERENMDT(1)DDER 42.556000000000004 0.031945999999999995 2300900.0 159.37 0.0 121.13 0.0 103.9 183.22 0.0 172.98 0.0 0.0 0.0 True False 186.26775977759172 0.0 138.3080554181594 0.0 88.61644763549772 202.6082187884071 0.0 197.5004447290324 0.0 0.0 0.0 0.0 ERENMDT(ph)DDER ddPTM_A549_PD325901_60min_R1 2 ERENMDTDDER 11 1 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 ERENMDT(1)DDER;ERENMDT(1)DDER 70.41199999999999 0.0012697000000000001 11570400.0 288.4 514.65 611.62 449.42 699.73 357.07 563.2 273.14 433.34 462.97 421.56 True False 317.67815569114134 558.0213616643318 653.1282111698389 477.1796526931247 650.5833787374522 354.1621403061813 584.6328841948653 267.6920084258151 415.12822678044284 433.73799518904525 369.71079248901634 0.8592612445864133 1.5093456101390657 1.7665922240807794 1.2906835894094195 1.759708918307491 0.9579437427883662 1.5813249060405343 0.7240578686481486 1.1228458438707218 1.1731818599856836 1.0 8.530253348645077 -8.248398925406995 24.915567724430918 1.0345849639930218 1.4022636418062748 0.2845048360566117 0.291294322803077 714.0608707872852 1364311.9675639193 0.04304251819322882 0.055386023477572606 5.644182847371882e-09 8.248398925406995 0.36767867781325303 ERENMDT(ph)DDERQYQDFLEDLEEDEAIRK ddPTM_A549_PD325901_60min_R1 6 ERENMDTDDERQYQDFLEDLEEDEAIRK 28 3 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 ERENMDT(1)DDERQYQDFLEDLEEDEAIRK;ERENMDT(0.998)DDERQY(0.002)QDFLEDLEEDEAIRK;ERENMDT(1)DDERQYQDFLEDLEEDEAIRK;ERENMDT(1)DDERQYQDFLEDLEEDEAIRK;ERENMDT(0.981)DDERQY(0.019)QDFLEDLEEDEAIRK;ERENMDT(1)DDERQYQDFLEDLEEDEAIRK 137.47 3.1817e-28 54496500.0 2282.52 2895.2900000000004 3161.03 3312.55 3886.98 4097.679999999999 3966.9900000000007 3574.0299999999997 3650.9500000000003 2964.7400000000002 2752.0099999999998 True False 2514.239750097585 3139.2862493211383 3375.556504617566 3517.1586901531077 3613.971934153036 4064.3098526614745 4117.95597527022 3502.7431678777066 3497.5132680206248 2777.545810434305 2413.5302164287364 1.0417270656001427 1.3007031061605236 1.398597159314759 1.4572673116798154 1.4973800243116802 1.6839689120094679 1.7061961550096092 1.4512945162379869 1.4491276074412864 1.1508228865450862 1.0 11.236929173520014 -10.492596916594872 0.8314535517976531 1.0022368039822223 1.4534283159377024 0.38819400270575355 0.17430004961700885 0.44033404588518354 0.5512305587263181 0.11894272028446964 0.03481265582823306 3.216644630340149e-11 10.492596916594872 0.45119151195548013 ERENS(ph)ESKEEDVEIDIELAPGDQTSTPK ddPTM_A549_MK2206_60min_R1 2 ERENSESKEEDVEIDIELAPGDQTSTPK 28 2 H0Y4W2;F2Z2U4;Q9Y4A5-2;Q9Y4A5;A0A2R8YFJ4 H0Y4W2 TRRAP Transformation/transcription domain-associated protein 1 ERENS(0.5)ES(0.5)KEEDVEIDIELAPGDQTSTPK;ERENS(0.5)ES(0.5)KEEDVEIDIELAPGDQTSTPK 105.49 2.1682e-15 12885500.0 1357.52 1053.93 710.26 995.4499999999999 1850.63 1142.67 1142.6399999999999 1173.29 1907.43 1853.48 1870.07 True False 1586.6361878225277 1107.5705353010023 810.9855480995783 1239.3352946874486 1578.4047785147368 1263.5865809570416 1350.2428974282707 1339.6074505499278 1475.4001505398041 1434.777580702235 1405.6800076936454 1.1287321290325416 0.7879250819809531 0.5769346819054461 0.8816624608049131 1.1228763088866063 0.8989148127889063 0.96056206963039 0.9529960184522184 1.0495988720509382 1.0206999977586158 1.0 10.457052497952187 -6.5347468688103865 21.50522050342345 1.009552684377334 0.8106082267650574 0.24970168176018592 0.13101755629927583 34.99551065111057 63412.19765248859 0.017867498499537757 0.03723902786660949 2.9191279497958497e-07 6.5347468688103865 -0.19894445761227653 ERENS(ph)ESKEEDVEIDIELAPGDQTSTPK ddPTM_A549_PD325901_60min_R1 2 ERENSESKEEDVEIDIELAPGDQTSTPK 28 2 H0Y4W2;F2Z2U4;Q9Y4A5-2;Q9Y4A5;A0A2R8YFJ4 H0Y4W2 TRRAP Transformation/transcription domain-associated protein 1 ERENS(0.832)ES(0.168)KEEDVEIDIELAPGDQTSTPK;ERENS(0.615)ES(0.385)KEEDVEIDIELAPGDQTSTPK 145.79 3.2548e-36 24921000.0 5794.2 6865.4 5830.8 6024.0 7077.7 6439.9 6447.9 6688.5 6612.6 7107.4 7728.799999999999 True False 6382.422918535406 7443.9713521233925 6226.513151448771 6396.088798503367 6580.5867687394675 6387.455589542037 6693.278362926265 6555.092620473252 6334.695417935931 6658.637551043528 6778.206596899874 0.9416093810794309 1.0982213725276562 0.9186077559655044 0.9436255308931901 0.9708448207744521 0.9423518593345099 0.9874703975514035 0.9670836270277352 0.9345680641887206 0.9823597814337744 1.0 12.726687894895111 -5.785015877984881 24.999961267080902 0.9637258956920027 1.01991558618488 0.23578584475374087 0.04078677228120454 215.4074558745325 228413.24249224333 0.005429326185754877 0.016894283121416415 1.6405297936591125e-06 5.785015877984881 0.056189690492877364 EREPEAASSRGS(ph)PVR ddPTM_A549_MK2206_60min_R1 5 EREPEAASSRGSPVR 15 2 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREPEAAS(0.214)S(0.214)RGS(0.572)PVR;EREPEAAS(0.002)S(0.003)RGS(0.996)PVR;EREPEAAS(0.056)S(0.056)RGS(0.888)PVR;EREPEAAS(0.001)S(0.002)RGS(0.998)PVR;EREPEAAS(0.32)S(0.32)RGS(0.359)PVR 97.765 4.5303e-06 511877600.0 5121.139999999999 6277.75 5626.9400000000005 5073.219999999999 7774.67 5247.3099999999995 5832.889999999999 4907.89 8699.43 9257.4 8397.22 True False 5985.463232147935 6597.260660561763 6424.924703662662 6316.159127745496 6631.026342043073 5802.576861317521 6892.650610848897 5603.598437282754 6729.022995135074 7166.146910456468 6311.958522518 0.9482735367785944 1.0452002555190982 1.0178971678507793 1.0006654994978992 1.0505497332383908 0.9192989530296733 1.0919987173963943 0.8877749144408726 1.0660752872708512 1.1353285806443656 1.0 12.623872009729206 EREPEAASSRGS(ph)PVR ddPTM_A549_PD325901_60min_R1 5 EREPEAASSRGSPVR 15 2 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREPEAAS(0.191)S(0.191)RGS(0.617)PVR;EREPEAAS(0.002)S(0.007)RGS(0.991)PVR;EREPEAAS(0.001)S(0.001)RGS(0.998)PVR;EREPEAAS(0.004)S(0.002)RGS(0.993)PVR;EREPEAAS(0.155)S(0.155)RGS(0.691)PVR 104.78 1.7948e-06 708671800.0 7894.2699999999995 7387.679999999999 8056.089999999999 7634.3 9163.23 7757.26 7960.76 8472.13 8391.65 8469.09 9083.63 True False 8695.69047894558 8010.265720665216 8602.8247126046 8105.853372246721 8519.63633622738 7694.087446471353 8263.711078095024 8303.146720892586 8038.978133248959 7934.350212056057 7966.401095874858 1.0915456520822635 1.005506203398806 1.0798884727332263 1.01750505337273 1.0694460690209282 0.965817230876749 1.0373204887178125 1.0422707344213564 1.0091103920704776 0.9959767423918189 1.0 12.959712403638859 -2.0000000000873843 0.16661965549955599 0.9947259072506268 1.2781433479676139 0.30564916464854686 0.03116235288068316 48.33822857773031 0.4845853678254275 0.036888077481885086 3.431314375242168 0.009999999997987901 2.0000000000873843 0.28341744071698705 ERERDHS(ph)PTPS(ph)VFNSDEER ddPTM_A549_PD325901_60min_R1 1 ERERDHSPTPSVFNSDEER 19 2 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERERDHS(0.961)PT(0.107)PS(0.924)VFNS(0.008)DEER 88.836 1.8981999999999999e-06 7773600.0 559.63 454.2 592.61 687.43 588.18 1310.1 533.71 375.21 622.4 490.73 571.32 True False 616.4432256221681 492.47702801503846 632.8280782534225 729.8909898331954 546.8682659108437 1299.43097996227 554.0206261073182 367.726142203449 596.2426924543026 459.74522405149435 501.0512618958743 1.2302997168187433 0.9828875116522156 1.2630006675543177 1.4567191929054104 1.0914417495758963 2.593409255263607 1.1057164570567466 0.7339092228049668 1.189983416463704 0.9175612537366208 1.0 8.968814400979044 -7.966444573220386 24.999957745708695 1.058595511959846 1.431101716960767 0.21733414165229736 0.4136827294030165 265.3630797597806 197704.20242063032 0.06334914395486713 0.08752918475154074 1.0803274887463412e-08 7.966444573220386 0.3725062050009209 ERERDHS(ph)PTPSVFNS(ph)DEER ddPTM_A549_MK2206_60min_R1 2 ERERDHSPTPSVFNSDEER 19 2 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERERDHS(0.937)PT(0.064)PS(0.012)VFNS(0.987)DEER;ERERDHS(0.85)PT(0.183)PS(0.073)VFNS(0.893)DEER 63.115 0.00076342 10012700.0 550.8 698.98 600.08 683.66 995.0899999999999 835.0 410.95000000000005 588.97 961.15 922.72 1090.4 True False 643.7615742329015 734.5550964150314 685.1803673353344 851.1567306906636 848.7135791877523 923.3591457718593 485.61429557703906 672.4583011449778 743.4510596411575 714.2769111431287 819.6235864909604 0.7854356375821567 0.8962102952159646 0.8359695580123366 1.038472714450185 1.0354918930790344 1.1265648780619162 0.5924845301928057 0.8204477179871815 0.9070640131576508 0.8714694439201652 1.0 9.678817691478592 -10.272603302886727 1.0676726238815664 0.9913627009431245 0.8980793683186322 0.0 0.14183739429081205 1.0585491635130833 2.385667514802638 0.05757373001888097 0.025751986760353646 5.3382228153526707e-11 10.272603302886727 -0.09328333262449229 ERERDHS(ph)PTPSVFNS(ph)DEER ddPTM_A549_PD325901_60min_R1 1 ERERDHSPTPSVFNSDEER 19 2 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERERDHS(0.943)PT(0.181)PS(0.377)VFNS(0.499)DEER 75.226 0.00014593 5783100.0 441.6 459.55 482.32 479.63 480.53 790.79 335.23 316.85 602.51 490.51 540.84 True False 486.430906911262 498.27789129086517 515.0531356257754 509.2556557812368 446.77923053850503 784.3500684255888 347.9873610948947 310.53017818598363 577.1885999849644 459.5391148890399 474.32010866723516 1.0255329639682709 1.0505097342192546 1.085876660538373 1.0736539448267648 0.9419360941577711 1.6536302258605249 0.7336550880642282 0.654684826790339 1.2168756699073406 0.9688375139318307 1.0 8.889717222138065 -5.492065922239375 3.4849191730918423 1.0731754239695706 1.0275039312334207 0.0 0.2489335854791052 2.49098023088876 58.736915633339656 0.03319320293886377 0.2170825606584543 3.2205798973143678e-06 5.492065922239375 -0.0456714927361499 ERERDHS(ph)PTPSVFNSDEER ddPTM_A549_MK2206_60min_R1 2 ERERDHSPTPSVFNSDEER 19 2 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERERDHS(0.996)PT(0.004)PSVFNSDEER;ERERDHS(0.995)PT(0.005)PSVFNSDEER 213.18 6.216799999999999e-67 129718000.0 1644.94 1612.6399999999999 1346.46 1553.8400000000001 1450.74 1266.27 904.83 969.23 1769.0900000000001 2148.54 3076.5 True False 1922.5656570781937 1694.7164878576448 1537.4082745672822 1934.5308697545292 1237.338067783657 1400.2658509180012 1069.225898690771 1106.621320642388 1368.3939396562191 1663.1833217741635 2312.5201429195163 0.8313725019713722 0.7328439897254667 0.6648194089355395 0.8365466029248151 0.5350604497747377 0.6055150936545747 0.46236392879194205 0.4785347812128883 0.5917327655916742 0.7192081447880595 1.0 11.175250216761754 -10.656970668595743 0.9724985007542915 0.9956498830728129 0.6341302544558117 0.18101336383796685 0.14351495572556752 0.340373058873354 0.5833790695018617 0.0826059000353134 0.023133468018055974 2.2030752494446263e-11 10.656970668595743 -0.36151962861700115 ERERDHS(ph)PTPSVFNSDEER ddPTM_A549_PD325901_60min_R1 2 ERERDHSPTPSVFNSDEER 19 2 Q6UN15;Q6UN15-5;Q6UN15-3 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERERDHS(0.999)PT(0.001)PSVFNSDEER;ERERDHS(0.998)PT(0.002)PSVFNSDEER 255.63 5.4787999999999986e-98 211680000.0 1404.15 1575.59 1737.55 1953.17 2034.51 2857.5 2438.36 2324.58 2463.3 2080.1400000000003 2500.5 True False 1546.698274319404 1708.3704988335867 1855.4705917369492 2073.812874929088 1891.613036278471 2834.229467401107 2531.153124121789 2278.2144283022685 2359.776067356499 1948.799605401087 2192.954351975486 0.7053034519054565 0.7790269310871107 0.8461054330955314 0.9456707902108991 0.8625865990208338 1.292425200208996 1.1542206165128983 1.038879093059998 1.0760716771102574 0.8886640087357695 1.0 11.098660066183848 -6.346499309509278 1.1842420957820008 1.058479394368741 0.7333012254568263 0.566106139636573 0.10783916384180171 0.2722758523993378 0.6865234085638928 0.015201489253474181 0.06632340079591781 4.502986972235619e-07 6.346499309509278 -0.32517816891191464 EREREDES(ph)EDESDILEESPCGR ddPTM_A549_MK2206_60min_R1 2 EREREDESEDESDILEESPCGR 22 2 Q9NSY0 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 1 EREREDES(0.5)EDES(0.5)DILEESPCGR;EREREDES(0.828)EDES(0.172)DILEESPCGR 53.475 0.0025843000000000003 2760990.0 0.0 150.47 0.0 147.78 0.0 189.87 168.92 0.0 134.18 0.0 187.1 True False 0.0 158.12828029066608 0.0 183.98610663409625 0.0 209.96191737449442 199.61057746410376 0.0 103.78844424143011 0.0 140.63790630269506 0.0 1.1243645788520662 0.0 1.3082255806489527 0.0 1.4929255056072384 1.4193227324821074 0.0 0.7379834282945466 0.0 1.0 7.135841687914167 -6.261106084634993 24.999599772749324 0.8545959115147944 0.44974586976557634 0.04412016066008784 0.6043446921507032 52.23055478135025 3917473.7639262048 0.07039136086814299 0.17444325750092346 5.481430542659837e-07 6.261106084634993 -0.40485004174921807 ERERS(ph)PDSFSMR ddPTM_A549_MK2206_60min_R1 1 ERERSPDSFSMR 12 2 Q92834-2;Q92834;H7C4H4;A0A2R8Y838;A0A2R8Y414;Q92834-3;Q92834-6;A0A2R8YDN2;Q92834-5 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 ERERS(0.999)PDSFSMR 58.885 0.0036674999999999998 5345800.0 855.22 1093.6 810.95 1115.5 1385.4 681.58 861.31 724.91 1569.8 1396.4 1449.4 True False 999.5602278784714 1149.2595688567317 925.9549041637606 1388.7975500766981 1181.609495228282 753.704343203813 1017.7988780227753 827.6682124437681 1214.2428064554854 1080.9522701580809 1089.4739785950096 0.9174704926569321 1.0548756477312307 0.8499100688553168 1.2747413681854958 1.0845688088412087 0.6918057319512976 0.9342112781209636 0.7596952554214582 1.1145220815841588 0.9921781441279411 1.0 10.089416023658124 ERERS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ERERSPR 7 2 A0A0C4DGG8;Q8IX12-2;Q8IX12;F5H1H2;F5H2E6;F5H3E1 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 ERERS(1)PR;ERERS(1)PR 51.787 0.016057 178826000.0 3087.9 3195.0 2737.3 2778.8999999999996 3495.2 2334.2 2303.7 2749.2 2684.5 3284.3999999999996 4767.2 True False 3401.3813348081644 3464.2538628534758 2923.0696387220814 2950.546341660192 3249.709209785407 2315.191049101544 2391.368564133011 2694.365049294323 2571.6798006002173 3077.0224234807874 4180.864621770661 0.8135593095017811 0.8285974735499354 0.6991543384354111 0.7057263529405049 0.7772816160713438 0.553758913179309 0.5719794302070057 0.6444516369327494 0.6151071687920551 0.7359775314077548 1.0 12.02958561370255 -10.791987909016425 1.0224894885044202 1.0012432281269368 0.6851424723578277 0.14107391026564065 0.11498293109465212 0.29614539341320706 0.5461696983632887 0.06771924268464317 0.01671818464595305 1.614403502031461e-11 10.791987909016425 -0.3161007557691091 ERES(ph)SNPSDR ddPTM_A549_MK2206_60min_R1 2 ERESSNPSDR 10 1 Q9Y388 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ERES(0.5)S(0.5)NPS(0.001)DR;ERES(0.5)S(0.5)NPSDR 92.24700000000001 0.00051839 56630000.0 1076.73 1328.65 1009.72 865.77 734.1700000000001 495.23 201.35 511.28 566.48 1488.47 1724.54 True False 1258.4557004789256 1396.2726098770088 1152.913479045851 1077.8836888658923 626.1745655491183 547.6349098929314 237.93268868338447 583.7555057293316 438.1731844826752 1152.2235932126882 1296.2891231173153 0.9708140553186099 1.0771305451666935 0.8893953196747694 0.8315148755347096 0.483051623578615 0.4224635539454187 0.18354908981354723 0.45032816778213547 0.3380211842161852 0.8888631190870611 1.0 10.340171816131123 -6.455186896146301 2.4734954798049436 0.5922735653382085 0.9970077622126846 0.41532592302510785 0.2277772776282411 0.32206842515722534 3.85333181047235 0.04371724232529578 0.11380284896113982 3.50600962364068e-07 6.455186896146301 0.4047341968744761 ERESS(ph)NPSDR ddPTM_A549_MK2206_60min_R1 1 ERESSNPSDR 10 1 Q9Y388 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ERES(0.02)S(0.98)NPSDR 115.24 2.5033000000000002e-05 37024000.0 1571.8 1476.1 1462.1 969.96 738.49 475.04 387.31 508.55 883.25 1849.5 2069.6 True False 1837.0814131795114 1551.2271850671373 1669.4477654329312 1207.6002435431585 629.859099271788 525.3084174939686 457.6792135781554 580.6385198690572 683.1952852604198 1431.6966654664643 1555.6612019457925 1.1809007069673805 0.9971497541539833 1.073143537516277 0.7762617220463648 0.40488192318736993 0.337675334987414 0.29420237067408933 0.3732422709667151 0.43916714282383057 0.920313924185886 1.0 10.603312183358124 -6.382392241579173 3.52245315787425 0.6173868707548511 1.0772540375851916 0.5015415746080091 0.22928469759944015 0.2303954152911222 5.211825367967252 0.04245378381243367 0.10559967847843783 4.145794379434919e-07 6.382392241579173 0.45986716683034046 ERESS(ph)NPSDR ddPTM_A549_PD325901_60min_R1 3 ERESSNPSDR 10 1 Q9Y388 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ERES(0.001)S(0.999)NPSDR;ERES(0.214)S(0.786)NPSDR;ERES(0.007)S(0.993)NPSDR 117.03 2.1329000000000002e-05 175533000.0 2360.73 2438.65 3111.6299999999997 2223.86 2810.0099999999998 2499.82 2249.03 2050.81 2158.06 3117.58 2468.24 True False 2600.389571722427 2644.163593942919 3322.8039235512347 2361.2227814474945 2612.6445916082344 2479.4622947326784 2334.618067366437 2009.9049857206774 2067.3642430558048 2920.735466750467 2164.662127462496 1.201291203246905 1.221513307040907 1.5350219701244365 1.0908043114402408 1.2069526040402812 1.145426929808766 1.078513841835987 0.9285074840186579 0.9550516992133329 1.349280069945267 1.0 11.079926143298126 -7.450027280385103 0.9984054917201111 0.9739201263834064 1.2850939054283124 0.19911149308994458 0.1518708456293391 0.23621854067082215 0.4695424637315435 0.017033883158264873 0.034738107979104246 3.5479110218573456e-08 7.450027280385103 0.31117377904490595 ERESSANNS(ph)VSPSESLR ddPTM_A549_PD325901_60min_R1 2 ERESSANNSVSPSESLR 17 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ERESSANNS(0.492)VS(0.492)PS(0.017)ESLR;ERES(0.109)S(0.109)ANNS(0.667)VS(0.109)PS(0.004)ES(0.001)LR 147.04 5.5853e-17 18298500.0 1563.88 1279.41 2145.55 2006.92 2485.02 2019.6599999999999 1804.8200000000002 2022.75 2094.75 2365.39 1772.6100000000001 True False 1722.643946332393 1387.2303707897863 2291.1599252402607 2130.8828903539793 2310.480768053598 2003.2125585761387 1873.5034127353997 1982.4046644333228 2006.7149421893496 2216.038871720018 1554.5902075006063 1.1081016321992503 0.8923447247362423 1.4738031374350897 1.3707039193176882 1.4862313919809613 1.2885791695528594 1.205142939725271 1.2751943598181643 1.2908321000012262 1.4254810438326744 1.0 10.602318618380536 -10.685187672381598 0.7758091876752196 0.9853657144300413 1.271494158824334 0.0 0.2012702188705912 0.8228752928510813 0.8093148685527737 0.14606273581531065 0.03158327221309317 2.064487832535315e-11 10.685187672381598 0.28612844439429275 ERESSANNSVS(ph)PSESLR ddPTM_A549_MK2206_60min_R1 2 ERESSANNSVSPSESLR 17 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ERESSANNS(0.321)VS(0.497)PS(0.167)ES(0.014)LR;ERESSANNS(0.036)VS(0.959)PS(0.005)ESLR 130.71 1.2704e-12 26070000.0 1619.46 1818.74 1489.5 1749.01 1976.77 1594.46 1455.12 1379.3200000000002 2566.57 2202.52 2192.55 True False 1892.7852560043827 1911.3060975333688 1700.733497443642 2177.5175285160426 1685.9897516113854 1763.1846988831117 1719.4964686216351 1574.8428339903398 1985.2459929700942 1704.9692022834265 1648.0793236984182 1.1484794626006383 1.1597172964006668 1.0319488103443126 1.3212455839986657 1.0230027932319987 1.0698421329177215 1.043333560403483 0.9555625213817197 1.2045815783399598 1.034518895885025 1.0 10.686569967202779 ERESSANNSVS(ph)PSESLR ddPTM_A549_PD325901_60min_R1 1 ERESSANNSVSPSESLR 17 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ERESSANNS(0.169)VS(0.776)PS(0.053)ES(0.001)LR 80.002 8.0577e-05 13951000.0 1188.1 1285.6 1266.9 1842.0 1595.4 1301.9 1346.6 1704.4 1713.7 1151.0 1245.2 True False 1308.7150373670074 1393.9420238135917 1352.8794524885861 1955.7761565144772 1483.3446078312095 1291.2977580435688 1397.8455998877935 1670.4044049240656 1641.6791485522801 1078.325663569111 1092.0482939731548 1.1984039942094162 1.2764472336127821 1.2388458092512191 1.7909246022434195 1.3583141112142736 1.1824548100757457 1.2800217788922765 1.5296067162439322 1.5033026997180003 0.9874340443735162 1.0 10.092820943058092 -10.873710982808765 1.1144066664557377 0.9993276881327332 1.3834111119173005 0.4188003261303176 0.17121186574533878 0.4179224035660909 0.9190328512463003 0.12425465299475136 0.029812106548387507 1.3374852990904902e-11 10.873710982808765 0.3840834237845673 EREVDEDS(ph)EPER ddPTM_A549_MK2206_60min_R1 5 EREVDEDSEPER 12 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER 213.55 3.6865e-32 604620000.0 4433.67 5150.55 5522.27 4487.51 6360.35 5629.63 5859.72 6188.5 6969.59 6821.09 6491.99 True False 5181.965103175725 5412.690995222238 6305.410923751667 5586.950151451982 5424.750940504698 6225.353709954046 6924.355274555759 7065.738826486397 5390.988993148223 5280.201031547256 4879.849713190984 1.061910798024799 1.1091921500350514 1.2921321955279015 1.1449020932652076 1.111663526407537 1.2757265235291892 1.4189689604247773 1.447941892019055 1.1047448815023033 1.0820417311775117 1.0 12.252621001841076 -8.975156950229932 13.619236477804359 1.0461737269285944 1.2341478212204904 0.29677111019936164 0.11932512288666047 1.0739001781748367 587.7619920129507 0.02289937525987293 0.02376498664703909 1.058870989301982e-09 8.975156950229932 0.18797409429189593 EREVDEDS(ph)EPER ddPTM_A549_PD325901_60min_R1 4 EREVDEDSEPER 12 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER 212.35 4.2674e-32 569015000.0 9449.060000000001 8563.42 8488.99 8431.83 9968.05 7513.04 8493.76 8096.34 8268.789999999999 8616.04 8858.39 True False 10408.321615169685 9285.089456725109 9065.103909843774 8952.644989024673 9267.928555905657 7451.856293180477 8816.994684763811 7934.852147244138 7921.281511791792 8072.02176397742 7768.864187960856 1.3397481746815842 1.1951669165634142 1.166850609113705 1.1523750155007577 1.1929579835193733 0.9591950783138113 1.1349142514844328 1.021365794956296 1.019618997081598 1.039022123270781 1.0 12.923487975936677 -2.0000000070330968 0.24601332286508543 0.9920711195733951 3.032683566784405 0.7437467975529852 0.05470467889468271 13.751171059478661 0.16620225837883867 0.02364180190655916 11.73481329263109 0.009999999838056963 2.0000000070330968 2.04061244721101 EREVDEDS(ph)EPEREVR ddPTM_A549_MK2206_60min_R1 10 EREVDEDSEPEREVR 15 2 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR 243.97 2.5009e-65 1663104000.0 8378.03 9598.560000000001 8341.41 7809.8 10684.6 7861.97 7570.669999999999 7671.119999999999 11971.789999999999 13093.919999999998 13998.249999999998 True False 9792.036640832388 10087.085705235435 9524.347366842145 9723.20135059524 9112.909493804038 8693.918447046684 8946.162742660237 8758.524751819723 9260.1986800202 10135.994377877612 10522.098192954045 0.9306163524865667 0.9586572487975916 0.9051756781000173 0.9240743787304918 0.8660734129915603 0.8262533087619757 0.8502261220723917 0.8323933678631443 0.8800714943167081 0.9633054350951619 1.0 13.361134798128331 -10.559399352380387 0.9378824315658775 0.9975735888740811 0.8856283323110198 0.44025404440838023 0.04091846964164048 0.3797987487552836 0.6155929867633608 0.027112767126546117 0.008236895562910641 2.7580405533822205e-11 10.559399352380387 -0.11194525656306131 EREVDEDS(ph)EPEREVR ddPTM_A549_PD325901_60min_R1 10 EREVDEDSEPEREVR 15 2 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR 233.49 1.7939999999999998e-55 2090271300.0 12838.039999999997 12364.74 12835.91 12708.35 14324.63 14769.3 13718.760000000002 15175.23 14565.550000000001 14398.0 15149.409999999998 True False 14141.348369934456 13406.760033858796 13707.032041197215 13493.315916743073 13318.517406090736 14649.023717545802 14240.834918993529 14872.548132912367 13953.410586564534 13488.907822821939 13286.12861002237 1.064369372374354 1.009079501439225 1.0316799154614036 1.015594257198776 1.0024377903465373 1.1025803036781787 1.0718573737311994 1.119404197374191 1.050223958846733 1.0152624755300503 1.0 13.697633164466598 -5.179042193666921 19.36127208172988 1.0360232147498671 1.064378694935088 0.007492534252949712 0.039181180591502024 41377.94342346127 9712009.351383787 0.005888949013323114 56.6313432021416 6.62152169508073e-06 5.179042193666921 0.028355480185220827 ERFS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 ERFSPPR 7 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 ERFS(1)PPR;ERFS(1)PPR 93.178 0.010119 33769000.0 6096.5 6507.8 5073.0 5264.0 7171.700000000001 5837.8 5317.2 5649.1 8155.7 8513.1 8767.2 True False 7125.440154885408 6839.019222938768 5792.427682129305 6553.680236309939 6116.752430293546 6455.552121181988 6283.2664130483845 6449.877224643184 6308.446971976683 6589.984797395269 6590.062277589461 1.0812401848031974 1.0377776316615284 0.8789640276735112 0.9944792568344544 0.9281782436403554 0.9795889400218727 0.9534456805386523 0.978727810597026 0.957266670063126 0.9999882428737502 1.0 12.686076383756557 -5.535699193547239 24.940743228627046 0.9697115031066978 1.0703745849744315 0.5428135710589095 0.034541149705645514 98.74768714263456 192102.83937376732 0.004471717592238152 0.0173418014829522 2.9127338735615316e-06 5.535699193547239 0.10066308186773365 ERFS(ph)PPR ddPTM_A549_PD325901_60min_R1 4 ERFSPPR 7 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 ERFS(1)PPR;ERFS(1)PPR;ERFS(1)PPR;ERFS(1)PPR 96.14299999999999 0.0032919000000000004 338729000.0 14020.099999999999 14010.5 13479.9 13273.5 15503.6 12689.9 14219.6 13809.599999999999 14844.9 16485.7 16266.7 True False 15443.41023094788 15191.214004854028 14394.727075223676 14093.37394869429 14414.680620516438 12586.557661722929 14760.734659263688 13534.156694578382 14221.020477530334 15444.790088532833 14265.999023107237 1.0825326852983475 1.0648545524395578 1.0090234165800749 0.9878995453361984 1.0104220950224638 0.8822766384138926 1.0346793544115 0.9487002398259344 0.9968471506619305 1.0826294088143604 1.0 13.800293159431998 -5.7707548959193735 2.3048173066331272 0.9894488894500424 1.0825224270148905 0.2996626858216468 0.04719069231338014 0.2122268414786717 2.1491875754459455 0.004963048188945006 0.026091062949224343 1.6952943088470177e-06 5.7707548959193735 0.09307353756484815 ERFS(ph)PPRHELS(ph)PPQK ddPTM_A549_MK2206_60min_R1 3 ERFSPPRHELSPPQK 15 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 2 ERFS(1)PPRHELS(1)PPQK;ERFS(1)PPRHELS(1)PPQK;ERFS(1)PPRHELS(1)PPQK 95.95700000000001 5.788200000000001e-06 84337000.0 6342.05 7003.740000000001 5951.240000000001 5695.91 9294.600000000002 8401.210000000001 6132.01 7934.01 10499.92 8671.01 9533.54 True False 7412.432991764294 7360.20045060776 6795.21532012521 7091.408205699113 7927.376652482175 9290.22046592814 7246.11684297691 9058.68021438658 8121.704884926786 6712.222818722014 7166.098905681435 1.0343749213240079 1.027086082327504 0.9482447018332135 0.9895772161443228 1.1062332179363563 1.2964125374494422 1.011166178188252 1.264102035656341 1.1333509335864351 0.9366634353037497 1.0 12.806972240260892 -6.760921954908367 24.998571972911538 1.0962642235268303 0.9980842405877349 0.19591815855533545 0.10286754354722005 19.147269507816564 924993.2494215028 0.01452567000981017 0.0288541792554616 1.7341155998044932e-07 6.760921954908367 -0.09817998293909536 ERFS(ph)PPRHELS(ph)PPQK ddPTM_A549_PD325901_60min_R1 3 ERFSPPRHELSPPQK 15 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 2 ERFS(1)PPRHELS(1)PPQK;ERFS(1)PPRHELS(1)PPQK;ERFS(1)PPRHELS(1)PPQK 65.454 0.001179 88312000.0 6914.0 6825.4 6818.299999999999 7929.0 7187.4 7338.6 6855.700000000001 7357.2 7413.200000000001 7682.4 7382.0 True False 7615.904190182219 7400.60041174338 7281.030839768669 8418.756321934467 6682.581819183921 7278.836874705074 7116.597415082991 7210.4548743882515 7101.648984097424 7197.331952913417 6474.060798353546 1.1763720526256198 1.143115679980248 1.1246466578782126 1.3003826476383242 1.0322086905460335 1.1243077724194674 1.0992478502662273 1.11374531364024 1.0969388773586253 1.1117183136036983 1.0 12.660455198721884 -14.999891225577919 0.08859347813859796 0.5272746939572128 1.2567110816268177 0.17629897891811708 0.06673083576680575 78.0293929217042 0.5054324000670027 6.940376960408496 0.56865194985072 1.0002504937310994e-15 14.999891225577919 0.7294363876696048 ERFS(ph)PPRHELS(ph)PPQKR ddPTM_A549_MK2206_60min_R1 6 ERFSPPRHELSPPQKR 16 3 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 2 ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR 111.67 1.1217e-07 1094604000.0 40765.2 41199.1 37753.9 34636.7 67064.4 49567.2 48134.700000000004 47431.3 72201.7 62903.7 66204.7 True False 47645.369146548794 43295.958214416045 43107.97072113969 43122.69305490052 57199.315599673544 54812.36820395553 56880.151924351136 54154.83202726419 55848.13023242255 48693.71048148298 49764.245833233785 0.9574217060621071 0.8700213876345322 0.8662438262522835 0.866539667845265 1.1494058563924712 1.1014407489995655 1.1429923426341804 1.0882277249562629 1.1222541263777335 0.9784878614389475 1.0 15.602821959496165 -6.751562459274086 24.999747763702896 1.076527598897187 0.8869245999409978 0.7349079164092305 0.05571385632571675 89.34807899384668 226149.7615144332 0.00868682022641827 0.01791195604197501 1.771893197039919e-07 6.751562459274086 -0.18960299895618915 ERFS(ph)PPRHELS(ph)PPQKR ddPTM_A549_PD325901_60min_R1 8 ERFSPPRHELSPPQKR 16 3 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 2 ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR 113.67 6.1421e-08 1541198000.0 56365.19 60171.3 64262.06 59601.5 63754.85 64525.24999999999 52196.08 60332.89000000001 69336.76999999999 72197.9 74892.54999999999 True False 62087.34259494023 65242.146622195745 68623.26983075893 63282.94929017241 59276.92927829233 63999.77775727847 54182.4303871909 59129.503178713414 66422.78668201277 67639.31227262935 65681.24113298999 0.9452827249294374 0.993314765323859 1.0447925259483446 0.9634858933624355 0.9024940493781117 0.9743996406476709 0.8249300630218521 0.9002494800454401 1.0112900660254167 1.0298117256291595 1.0 16.003193768533194 -8.788039474243003 24.93458491643111 1.0053314333896897 0.945008806149053 0.2446506822067025 0.05426247738711854 261.50455567982436 245129.7419051012 0.009956578803653535 0.010601044501604108 1.6291479480856014e-09 8.788039474243003 -0.06032262724063664 ERGDES(ph)PLGAEGAK ddPTM_A549_MK2206_60min_R1 1 ERGDESPLGAEGAK 14 1 K7EKN5;A0A590UJ23;A0A590UJ36;A6NDB9 K7EKN5 PALM3 Paralemmin-3 1 ERGDES(1)PLGAEGAK 91.637 1.7946e-05 14083000.0 3686.3 3668.3 3493.2 4755.4 4916.6 3560.2 3884.8 3491.4 5261.4 6055.1 4471.2 True False 4308.457318617912 3855.000801423875 3988.5882868547374 5920.473213478019 4193.374652980635 3936.9380009305028 4590.6178743343025 3986.316641964065 4069.701300729319 4687.248704550411 3360.8776411577232 1.2819441165771734 1.147022061801673 1.1867698597562708 1.7615854683238603 1.2477022672971043 1.1714017650384747 1.3658985433200628 1.1860939515164546 1.2109043337047602 1.394650208966189 1.0 11.714622304336176 -9.852936265729667 0.4580812902740286 0.9831086820594748 1.3157912858633631 0.0 0.1965674107876395 1.0014570260653772 0.4241743879409781 0.14109763904902198 0.050555290623357 1.4030195876029383e-10 9.852936265729667 0.33268260380388837 ERGDES(ph)PLGAEGAK ddPTM_A549_PD325901_60min_R1 1 ERGDESPLGAEGAK 14 1 K7EKN5;A0A590UJ23;A0A590UJ36;A6NDB9 K7EKN5 PALM3 Paralemmin-3 1 ERGDES(1)PLGAEGAK 40.81 0.02825 19724000.0 5013.2 5651.7 5308.0 5660.2 5781.4 5763.3 5928.9 5820.3 6239.0 6148.3 6195.6 True False 5522.136373477214 6127.988593642877 5668.232799596976 6009.817698753113 5375.3344087472415 5716.365595616026 6154.52753391857 5704.209550562977 5976.796526706934 5760.095288724561 5433.580477144295 1.0162978898914663 1.1277993616583994 1.0431855796448986 1.1060511064541494 0.9892803523124284 1.0520439735200817 1.1326836070261317 1.0498067663775388 1.099973866559557 1.0600920172165869 1.0 12.407687465071428 -10.938881440994491 1.1781691275781752 0.9997113220899275 1.071904537562587 0.036910825777823786 0.046345441687076966 0.49598387207559563 1.2153846427788884 0.02917808290348118 0.006725121468177475 1.1511145913583601e-11 10.938881440994491 0.07219321547265956 ERGT(ph)PPVDPK ddPTM_A549_MK2206_60min_R1 4 ERGTPPVDPK 10 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 ERGT(1)PPVDPK;ERGT(1)PPVDPK;ERGT(1)PPVDPK;ERGT(1)PPVDPK 114.71 0.00031907 266213000.0 10786.7 12168.0 11268.300000000001 10563.9 16474.6 11879.400000000001 11784.499999999998 13081.300000000001 18033.4 18357.8 19493.3 True False 12607.231250504798 12787.29922626986 12866.314380157239 13152.055974231493 14051.20816377066 13136.470223092487 13925.591108961224 14935.614334801088 13948.86369342231 14210.76022995418 14652.57562228929 0.8604105909767056 0.872699759816834 0.8780923376082211 0.8975934547797024 0.9589582422899193 0.8965297679890131 0.9503852065283193 1.0193166525672963 0.9519734996080482 0.9698472539078367 1.0 13.838866662688496 -5.532668026210353 0.255086601451555 0.9950867019340163 0.7506591876300027 0.7390579201015968 0.026288446444404884 3.0438430092462214 0.16823388135631856 0.015605258611034257 0.2306011381187549 2.9331344703748377e-06 5.532668026210353 -0.24442751430401355 ERGT(ph)PPVDPK ddPTM_A549_PD325901_60min_R1 3 ERGTPPVDPK 10 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 ERGT(1)PPVDPK;ERGT(1)PPVDPK;ERGT(1)PPVDPK 78.814 0.00051654 313880000.0 16902.9 16576.5 17398.7 19143.7 20339.9 21464.6 18787.1 19413.8 20345.800000000003 20016.8 20794.9 True False 18618.869964742695 17973.45983023182 18579.480408882442 20326.162870502812 18911.295592845676 21289.79941416544 19502.053371195598 19026.57652916852 19490.736780425384 18752.935831911534 18237.25912973206 1.0209247909620638 0.9855351455159086 1.0187649512854955 1.1145404430518415 1.0369593072247758 1.1673793338526866 1.0693522109033122 1.0432804838611762 1.0687316905340116 1.028275997972676 1.0 14.154601303291745 -6.01289541661897 24.428088664104195 1.0514134913694153 1.002959972268237 0.20467636439450954 0.044858287547326424 664.4208629295122 1258638.822616549 0.007007666014506782 0.019585288786272647 9.707437059643315e-07 6.01289541661897 -0.048453519101178344 ERHAS(ph)EMR ddPTM_A549_MK2206_60min_R1 2 ERHASEMR 8 1 P49754-2;P49754-3;P49754 P49754-2 VPS41 Vacuolar protein sorting-associated protein 41 homolog 1 ERHAS(1)EMR;ERHAS(1)EMR 51.276 0.0082392 89047400.0 2412.45 2041.75 1652.81 1121.33 3465.04 2243.89 2192.68 2528.8900000000003 3380.41 3206.23 3207.0499999999997 True False 2819.6125812602827 2145.666353980645 1887.2033111177086 1396.0559003384155 2955.3372061107307 2481.3369504263674 2591.061573490357 2887.367901900816 2614.7525324055214 2481.9404161765556 2410.650974922813 1.1696477883325953 0.8900775667242112 0.782860451699415 0.5791198787635012 1.2259498520748562 1.0293223599097823 1.0748389544750752 1.1977544372607765 1.0846665733056788 1.0295726930175055 1.0 11.235207070733832 -6.782034092611421 24.999988650304378 1.0655674965161592 0.8527180113226325 0.3716776164702553 0.14526826984252586 209.9289748309443 254833.03090970922 0.020876430743206956 0.03948413992013255 1.65183212243645e-07 6.782034092611421 -0.21284948519352676 ERHPGSFDVVHVK ddPTM_A549_MK2206_60min_R1 1 ERHPGSFDVVHVK 13 1 P62701;C9JEH7;P22090 P62701 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 0 72.891 0.0033542999999999997 3996200.0 198.31 167.36 283.34 154.05 179.75 147.11 301.57 284.28 323.56 249.38 344.46 False True 231.77987978599623 175.87790914764324 323.52187255164927 191.79225691556732 153.3090131133852 162.67708255628526 356.3613654146922 324.57756057098726 250.27417661914677 193.04488479806804 258.92107538763406 0.8951757960953761 0.6792722797259132 1.2494999569552248 0.7407363677461661 0.5921071233149495 0.6282883010304947 1.376332015001788 1.2535772149295226 0.9666041137997673 0.745574243074103 1.0 8.016368590778447 -7.729873077071047 24.999915029945093 1.0350498248408495 0.8007662299318432 0.2592280933902711 0.22479576328552392 237.98584985888905 188479.8413761478 0.032977937801696694 0.048911723017166626 1.862631412729165e-08 7.729873077071047 -0.2342835949090063 ERHPGSFDVVHVK ddPTM_A549_PD325901_60min_R1 2 ERHPGSFDVVHVK 13 1 P62701;C9JEH7;P22090 P62701 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 0 ; 99.531 0.00035753 7867800.0 585.88 588.22 467.96000000000004 586.01 930.98 800.87 628.5699999999999 680.1 770.69 828.0400000000001 905.8299999999999 False True 645.3581062979399 637.7913637582697 499.7185796720802 622.2065067747276 865.5911765066437 794.3479802476023 652.490575316702 666.5348719718717 738.3005794466692 775.7574130858097 794.4186525294753 0.8123652487804536 0.8028403685229505 0.629036815891655 0.7832224291229641 1.0895907010120558 0.9999110389948072 0.8213434732922421 0.8390221828875566 0.9293595726835934 0.9765095653478842 1.0 9.633755686754627 -2.0000143760703026 0.14718479970746437 1.0211604619720256 0.005011911396894493 0.3093836836399946 0.10405359338332414 56.93130812668992 0.5260064471308795 0.2096625420115313 12.404731893976459 0.009999668984226946 2.0000143760703026 -1.016148550575131 ERHPS(ph)WR ddPTM_A549_MK2206_60min_R1 11 ERHPSWR 7 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR 85.37700000000001 0.0038009 5444330400.0 20036.629999999997 19267.66 13032.28 11231.37 29233.929999999997 21235.28 18782.65 19597.239999999998 34616.189999999995 27739.630000000005 26059.000000000004 True False 23418.323295428785 20248.30159517017 14880.45326892571 13983.056154195352 24933.6576229529 23482.383234761965 22195.21437844039 22375.20878403042 26775.678235696458 21473.228316990273 19587.831108187773 1.195554687299701 1.0337184082982174 0.7596784547884751 0.7138644435396624 1.272915693689566 1.1988250820146318 1.1331124030961612 1.1423014962936613 1.3669547224401044 1.0962534952639242 1.0 14.257670041438274 -6.777959816589695 24.991322332401186 1.1792478508486934 0.9215602892185466 0.3888820642335915 0.1489044898708996 215.48160225940748 325969.9645812555 0.02579786773359378 0.04885074727370224 1.6674014829392938e-07 6.777959816589695 -0.25768756163014683 ERHPS(ph)WR ddPTM_A549_PD325901_60min_R1 10 ERHPSWR 7 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR 93.556 0.0033835000000000002 7548646000.0 24288.000000000004 20628.199999999997 19841.21 20115.61 19966.26 22580.5 18442.93 17003.61 26995.200000000004 26810.8 32814.0 True False 26753.699880119417 22366.61080867418 21187.753825488227 21358.10554383504 18563.898777457653 22396.611894540925 19144.78579350854 16664.459659476004 25860.685622336747 25117.961512440248 28778.0860250844 0.9296552889861949 0.7772098112841256 0.7362461077856232 0.7421656021605558 0.645070654152484 0.7782523088929171 0.6652557010504798 0.5790676852154253 0.8986242378939063 0.8728155684344745 1.0 14.812683023957721 -8.940680958089787 6.42283195557859 0.9560413052504502 0.7298169360143619 0.4781774161250051 0.08938096153356805 0.10698113238578291 8.457437885421712 0.015774290877574326 0.01661035835034741 1.1463547686500801e-09 8.940680958089787 -0.22622436923608824 ERHPS(ph)WRS(ph)EETQER ddPTM_A549_MK2206_60min_R1 1 ERHPSWRSEETQER 14 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 ERHPS(0.997)WRS(0.662)EET(0.341)QER 96.391 1.4684e-05 91335000.0 707.96 1230.2 689.92 332.28 1733.0 1105.5 1263.6 1400.1 1848.0 1309.3 1386.4 True False 827.4463400398057 1292.8119253909583 787.76103024929 413.68861491661625 1478.0779956912188 1222.4832762284914 1493.179763696671 1598.5684626264206 1429.4309506495968 1013.5282206516584 1042.1186173065546 0.7940039898513781 1.2405612028430528 0.7559226149181811 0.39696883641310443 1.4183394971979666 1.1730749800709872 1.4328309070573202 1.5339601808074963 1.3716585875263263 0.9725651224533437 1.0 10.025303783833552 -6.785769074222935 24.999999814759782 1.2404680293725439 0.8256320394333501 0.4577964424967105 0.2464120422889884 188.02123896517307 193200.9554007098 0.03811141126478925 0.07204814404035727 1.6376870911736104e-07 6.785769074222935 -0.4148359899391938 ERHPS(ph)WRS(ph)EETQER ddPTM_A549_PD325901_60min_R1 3 ERHPSWRSEETQER 14 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 ERHPS(0.995)WRS(0.893)EET(0.112)QER;ERHPS(0.995)WRS(0.902)EET(0.102)QER;ERHPS(0.989)WRS(0.958)EET(0.053)QER 83.42299999999999 9.8641e-05 222281000.0 4531.01 5328.0 4637.2 4526.7 4535.02 2981.17 3609.69 3342.33 4939.5 5779.3 6027.6 True False 4990.994799646732 5777.009258617623 4951.908277748891 4806.303978118394 4216.495840169667 2956.8923399237624 3747.0587282481615 3275.6646061428396 4731.909992573954 5414.3940116984895 5286.243412104553 0.9441477454894047 1.0928382990063046 0.9367537382803649 0.9092097361829418 0.7976355819171408 0.5593560699745698 0.7088320450148147 0.6196583000022574 0.8951366071677149 1.0242422812578957 1.0 12.368027141981898 -6.112819150924522 2.729090828282485 0.8670698117851191 1.0177391076939344 0.16993887886058945 0.14850045997784936 0.4952819506495002 7.080514993798228 0.024687437179583518 0.07968846804198167 7.71224555832928e-07 6.112819150924522 0.15066929590881528 ERHPS(ph)WRSEET(ph)QER ddPTM_A549_MK2206_60min_R1 1 ERHPSWRSEETQER 14 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 ERHPS(0.989)WRS(0.163)EET(0.847)QER 105.52 1.046e-05 89857000.0 1331.4 1041.6 582.31 588.25 2591.8 2455.3 1860.8 2018.7 2501.0 2288.7 1971.4 True False 1556.1077703952167 1094.6129909666895 664.8903141298475 732.3712764075464 2210.5496533367 2715.1182163037656 2198.8832734146604 2304.856907009468 1934.5274932763211 1771.681080428816 1481.8469721279162 1.0501136754766673 0.7386815315989324 0.4486902673729341 0.49422868230170164 1.4917529913108198 1.832252767912253 1.4838801271477364 1.5553946867399666 1.305483986985755 1.1955897698968883 1.0 10.53318075528074 -6.7592805583233115 24.999907561822365 1.2780784889054853 0.6701795471281315 0.6085053674809293 0.26730418364254005 41.19721859886695 477066.3144167138 0.046550002633980396 0.09329385869873934 1.740682013130101e-07 6.7592805583233115 -0.6078989417773537 ERHPS(ph)WRSEETQER ddPTM_A549_MK2206_60min_R1 3 ERHPSWRSEETQER 14 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ERHPS(0.86)WRS(0.134)EET(0.006)QER;ERHPS(0.999)WRS(0.001)EETQER;ERHPS(0.993)WRS(0.007)EETQER 118.52 6.011500000000001e-07 30437800.0 1852.3899999999999 1954.46 1770.53 1124.16 2154.8 1668.6499999999999 1714.9099999999999 1707.67 2222.56 2963.4700000000003 3039.31 True False 2165.0281454126443 2053.9336658263783 2021.6177772600834 1399.57925046546 1837.8317744463006 1845.2254354397749 2026.4869488454062 1949.737452020042 1719.1537086990077 2294.0200687807 2284.5654463113 0.9476761319787697 0.8990478557498521 0.884902544824979 0.6126238373802096 0.8044557346403433 0.8076920879719636 0.8870338786386741 0.8534390884568979 0.7525079710343968 1.0041384774004463 1.0 11.157704056915748 -10.93314083370386 1.1452599455029693 1.0017362097864726 0.8199971536388624 0.3772117177386992 0.08564271628704063 0.4500448400128609 1.0322503827566607 0.06579202878896663 0.014857700735644106 1.166431303529872e-11 10.93314083370386 -0.1817390561476102 ERHPS(ph)WRSEETQER ddPTM_A549_PD325901_60min_R1 3 ERHPSWRSEETQER 14 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ERHPS(0.994)WRS(0.006)EETQER;ERHPS(0.94)WRS(0.06)EETQER;ERHPS(0.993)WRS(0.007)EETQER 146.88 7.4483e-14 39179200.0 3022.14 2951.05 3122.4399999999996 2816.59 2538.9300000000003 4114.3099999999995 2520.86 2675.52 4180.889999999999 3648.6800000000003 3756.37 True False 3328.9454280181185 3199.745340210877 3334.347555157044 2990.5643673599943 2360.6043156330015 4080.80442345513 2616.792706767521 2622.154654695163 4005.1817327366166 3418.3017221123773 3294.360303591341 1.0104982822883928 0.9712797160415879 1.0121380929469406 0.9077830266773904 0.7165592400623553 1.238724379663769 0.7943249874383288 0.7959526017347361 1.2157691823721815 1.037622302085756 1.0 11.685782635651595 -8.76617730920943 24.998384353566426 1.1018909956033094 0.9327530157424837 0.18659776585559995 0.14147585567210577 133.2612002702163 703114.6815106949 0.02518341733521551 0.027236726891129347 1.7132576937678588e-09 8.76617730920943 -0.16913797986082568 ERKS(ph)ESDKDVK ddPTM_A549_PD325901_60min_R1 1 ERKSESDKDVK 11 3 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 ERKS(0.983)ES(0.017)DKDVK 55.66 0.0029035999999999997 15712000.0 2842.4 2543.7 2587.1 2263.5 2628.6 1710.2 1511.1 1450.5 2325.1 2993.8 3107.2 True False 3130.958355535712 2758.066526115927 2762.676163496107 2403.31125421852 2443.976204177707 1696.2726982150025 1568.6057374056484 1421.5686396047631 2227.384132753051 2804.7709570748943 2725.034098163658 1.148961166264157 1.012121840227441 1.0138134291082137 0.881938048348848 0.8968607790356276 0.6224776047235828 0.575627930110195 0.5216700372897086 0.8173784446418623 1.0292608664841916 1.0 11.412058567008105 -6.085697976813621 1.4321012822293149 0.8329421646130195 1.1044350269794996 0.34392911181858754 0.16081895332669424 0.5653692506308231 2.059969434523249 0.027862056815975016 0.1397452816621173 8.209222431755331e-07 6.085697976813621 0.27149286236648007 ERLES(ph)LNIQR ddPTM_A549_MK2206_60min_R1 3 ERLESLNIQR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ERLES(1)LNIQR;ERLES(1)LNIQR;ERLES(1)LNIQR 153.75 5.197500000000001e-09 14962400.0 2068.75 1760.31 1187.21 1284.51 2541.4300000000003 1920.59 2168.62 2343.95 3448.92 2579.5699999999997 3197.6800000000003 True False 2417.90442391851 1849.9022601080783 1355.5742299429778 1599.2150076638452 2167.589013611963 2123.8255590155377 2562.63018292804 2676.2120905458187 2667.745126793509 1996.8433454108272 2403.607804521657 1.0059479834313894 0.7696356521342833 0.5639747996294892 0.6653394137992932 0.9018064467648605 0.8835990443283659 1.0661598693876893 1.1134146284228816 1.1098920222238247 0.8307692052149165 1.0 11.230985796089175 -7.371396266808033 1.672201461301599 1.0594806187095656 0.7479209233282434 0.43374774002731054 0.13003248233947093 0.18995487775288777 1.0414494555067917 0.018265722066710385 0.033206596653971736 4.2521025806035506e-08 7.371396266808033 -0.3115596953813221 ERLES(ph)LNIQR ddPTM_A549_PD325901_60min_R1 2 ERLESLNIQR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ERLES(1)LNIQR;ERLES(1)LNIQR 109.0 6.2759e-05 25634000.0 1299.45 1001.15 1627.26 1114.35 1570.48 1585.58 1476.73 1419.6 1483.5700000000002 1384.6999999999998 1738.7199999999998 True False 1431.3692073954696 1085.520424036231 1737.6956491093024 1183.1808686275272 1460.1749026618756 1572.667562177374 1532.9277682476618 1391.2849643453433 1421.2207121536471 1297.2698056856198 1524.868462654196 0.9386837241712108 0.7118780738285891 1.139570849333888 0.7759232337772104 0.9575743340643859 1.0313463755686694 1.005285246426723 0.9123967072698609 0.93202839914458 0.8507421049469299 1.0 10.574469083756568 -5.832230970086426 0.8293390918361392 0.9675652337421591 0.8376375562032485 0.028164503801845875 0.11257657438719552 2.055188906551501 1.6538678456049078 0.015454456934365497 0.20301874990422109 1.4715296931884683e-06 5.832230970086426 -0.12992767753891055 ERLGS(ph)FGSITR ddPTM_A549_PD325901_60min_R1 2 ERLGSFGSITR 11 1 Q14315-2;Q14315 Q14315-2 FLNC Filamin-C 1 ERLGS(0.999)FGS(0.001)ITR;ERLGS(0.997)FGS(0.003)ITR 81.619 0.00021454 5662300.0 798.31 1051.95 884.8 919.64 1072.62 1364.73 925.72 1344.88 1445.31 1077.3 1228.0900000000001 True False 879.3538435152396 1140.6015183188465 944.8478487346279 976.4440741460226 997.2828715381162 1353.6160913547892 960.9487811734207 1318.0553133620501 1384.5686469009127 1009.2790941468315 1077.042715503928 0.8164521525999148 1.0590123324729794 0.8772612591252253 0.9065973522592952 0.9259455146785949 1.2567896071990585 0.8922104642096862 1.2237725527398018 1.2855280732789682 0.9370836268778893 1.0 10.072859752950556 -7.23404735158921 22.313272891118565 1.1327876155662335 0.9221485628152245 0.30234556567333337 0.1324485926734924 168.13065797897158 136956.85561643352 0.020074856189183216 0.03476040760845824 5.833814941013701e-08 7.23404735158921 -0.21063905275100903 ERLNS(ph)SENGEDR ddPTM_A549_MK2206_60min_R1 4 ERLNSSENGEDR 12 1 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 ERLNS(0.96)S(0.04)ENGEDR;ERLNS(0.981)S(0.019)ENGEDR;ERLNS(0.978)S(0.022)ENGEDR;ERLNS(0.932)S(0.068)ENGEDR 147.35 4.9185e-12 109752000.0 3083.6299999999997 3249.0699999999997 2424.31 2376.47 2773.29 1769.92 1651.8000000000002 2248.38 2882.08 3005.9 3325.1499999999996 True False 3604.0713564847506 3414.4337850999837 2768.1136120762653 2958.705256683791 2365.3427147550474 1957.2117596221901 1951.910678754479 2567.09475037497 2229.293481736033 2326.8651023117827 2499.423485528629 1.4419610671628493 1.3660885419654403 1.107500840935248 1.183755083447983 0.946355320917046 0.7830652832360016 0.7809443617921551 1.027074749532502 0.8919230753185214 0.930960725857007 1.0 11.28737964735545 -5.968155487729692 1.041021335064083 0.9299490601572385 1.4834982303368949 0.8025992152612548 0.09189477336620282 0.27009122682594 0.4281033309595332 0.01510743622225452 0.12512948290515524 1.0760798825233726e-06 5.968155487729692 0.5535491701796563 ERLNS(ph)SENGEDR ddPTM_A549_PD325901_60min_R1 3 ERLNSSENGEDR 12 1 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 ERLNS(0.974)S(0.026)ENGEDR;ERLNS(0.966)S(0.034)ENGEDR;ERLNS(0.983)S(0.017)ENGEDR 98.439 0.00020859 46203600.0 1423.96 1405.73 1349.71 1159.06 1574.21 1143.03 1671.4299999999998 1599.6 1803.76 2351.38 2750.3999999999996 True False 1568.5193709360535 1524.1958005098643 1441.309437065569 1230.6525037837505 1463.6429203296775 1133.7215426503892 1735.0371832915907 1567.694723138076 1727.954239944366 2202.9134655109774 2412.1182362221043 0.6502663706040762 0.6318909983853372 0.5975285188851146 0.5101957629204847 0.6067873864351098 0.4700107671446657 0.7193002222018071 0.6499244935826292 0.7163638224678048 0.9132692719745005 1.0 11.236084911066973 -9.938540554400651 0.46709289481059196 1.0275038109887955 0.5796362049384677 0.8102228429756315 0.06552389996488757 0.29059480222470874 0.12364298551091343 0.056070989686151235 0.018624575913367778 1.1520184793652825e-10 9.938540554400651 -0.4478676060503278 ERLNSS(ph)ENGEDR ddPTM_A549_PD325901_60min_R1 1 ERLNSSENGEDR 12 1 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 ERLNS(0.351)S(0.649)ENGEDR 147.64 1.5805e-12 27218000.0 767.06 786.02 556.81 663.41 702.3 461.97 552.13 480.45 997.78 1097.2 933.93 True False 844.9313665202731 852.2606639374303 594.5984749705339 704.3873289865733 652.9728708034712 458.20786948566564 573.141609287129 470.86704784426644 955.8467764734168 1027.9226047506763 819.0625306700521 1.0315834687603869 1.0405318666454193 0.725950037641338 0.859992128330341 0.7972198047800971 0.5594296556464604 0.6997531785738726 0.5748853478367071 1.167000980610681 1.2549989362958183 1.0 9.677829787237947 -8.77679273747281 24.999746178253936 1.0788615877929317 0.7850304193761444 0.4817085982581588 0.16030336281073249 173.64558656747985 282744.64591426996 0.028698026321412686 0.030605714134510322 1.6718883152682461e-09 8.77679273747281 -0.29383116841678736 ERLQGEHS(ph)QNGEEEPETEPVGEESISDAEK ddPTM_A549_PD325901_60min_R1 1 ERLQGEHSQNGEEEPETEPVGEESISDAEK 30 1 A0A1B0GVV3;Q5EBL4-3;Q5EBL4-2;Q5EBL4 A0A1B0GVV3 RILPL1 RILP-like protein 1 1 ERLQGEHS(1)QNGEEEPETEPVGEESISDAEK 78.22800000000001 4.1620999999999995e-06 2518100.0 470.71 695.32 371.2 338.17 262.44 352.71 503.16 236.3 355.92 475.14 498.87 True False 518.4961326816127 753.9170566257527 396.3918642069325 359.0579928602066 244.00711976884952 349.8376467006279 522.308029139717 231.5868111262362 340.96192014514037 445.1395793121002 437.51215259748454 1.1851010985713903 1.72319112086325 0.906013380093734 0.8206811873190262 0.5577150676162782 0.7996066957767044 1.193813762746484 0.529326579276298 0.7793198843069136 1.0174336339444106 1.0 8.773179280430837 -5.8360474774392515 7.747583158033496 0.8547285183313641 1.4516667868396422 0.5421890648459731 0.21594967028771397 0.1150372996387173 10.230730864810694 0.028347308470773398 0.08924886246596464 1.458654790186221e-06 5.8360474774392515 0.5969382685082781 ERLS(ph)PENR ddPTM_A549_MK2206_60min_R1 2 ERLSPENR 8 1 A0A087WX12;A0A087X032;A0A087WTH3;A0A087X251;A0A087X0T6;Q2M2Z5-5;Q2M2Z5-2;Q2M2Z5-3;Q2M2Z5-4;Q2M2Z5 A0A087WX12 KIZ Centrosomal protein kizuna 1 ERLS(1)PENR;ERLS(1)PENR 78.488 0.001191 15548600.0 1254.08 1540.9 1219.99 1216.95 1838.52 1295.17 1444.63 1396.35 2121.0 1978.6399999999999 2277.9 True False 1465.7380446877223 1619.32522828396 1393.002926852144 1515.1028046309616 1568.0761434727176 1432.224029735735 1707.1005714063958 1594.2868886425288 1640.5968865410143 1531.6638497748397 1712.234563158254 0.8560381131333644 0.9457379632011862 0.813558467294761 0.8848687190593334 0.9158068510078239 0.836464851576157 0.9970015838587042 0.9311147683538357 0.9581612950943459 0.8945409015395953 1.0 10.74166463822638 -8.192807536002283 0.5601901451152418 0.990331631783935 0.8713618134920738 0.22496687004657678 0.05187067013830513 0.4154116389595368 0.2800367640039589 0.01154470448731976 0.017056767501790485 6.414938010298505e-09 8.192807536002283 -0.11896981829186126 ERLS(ph)PENR ddPTM_A549_PD325901_60min_R1 2 ERLSPENR 8 1 A0A087WX12;A0A087X032;A0A087WTH3;A0A087X251;A0A087X0T6;Q2M2Z5-5;Q2M2Z5-2;Q2M2Z5-3;Q2M2Z5-4;Q2M2Z5 A0A087WX12 KIZ Centrosomal protein kizuna 1 ERLS(1)PENR;ERLS(1)PENR 63.408 0.0027621 17671900.0 1314.23 1077.3600000000001 1123.92 1197.8400000000001 1422.9099999999999 1105.49 1358.44 1347.3899999999999 999.88 1249.1999999999998 1606.41 True False 1447.6496621150097 1168.1529081952492 1200.19596988 1271.8278563079803 1322.9697103730127 1096.4872559640412 1410.136177566891 1320.5152494429926 957.8585207763629 1170.3252988101945 1408.831753872002 1.0275532604488231 0.8291642383731936 0.8519086587744831 0.90275354229667 0.939054437648067 0.7782953876149369 1.0009258903281417 0.9373122417305811 0.6798956072247844 0.830706218534398 1.0 10.460283616432056 ERLS(ph)WPK ddPTM_A549_MK2206_60min_R1 4 ERLSWPK 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 ERLS(1)WPK;ERLS(1)WPK;ERLS(1)WPK;ERLS(1)WPK 90.15 0.0035039000000000003 286222000.0 33741.9 33394.8 23131.3 21091.7 49042.8 38561.0 31504.0 34970.299999999996 47678.9 50071.100000000006 48990.5 True False 39436.70780974791 35094.452679276495 26411.666162751342 26259.16744684241 41828.66908660429 42641.49942527979 37227.86900561877 39927.44711705217 36879.705277557936 38760.00373411075 36824.8067809844 1.0709277592221405 0.9530111831407783 0.7172248403049274 0.7130836450281696 1.135882920863112 1.1579558225217632 1.0109453995789193 1.0842540832466747 1.0014908020264721 1.052551448935929 1.0 15.168390335038763 -6.769498664986535 24.999195649436334 1.0278289256251747 0.8594984430818703 0.41753852088468013 0.10841126746187085 158.6349531466929 492073.0598175411 0.016418678672127412 0.031416614163912095 1.7002051800346215e-07 6.769498664986535 -0.1683304825433044 ERLS(ph)WPK ddPTM_A549_PD325901_60min_R1 4 ERLSWPK 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 ERLS(1)WPK;ERLS(1)WPK;ERLS(1)WPK;ERLS(1)WPK 102.06 0.0030025 355964000.0 35217.0 33291.1 27952.9 32448.199999999997 27976.4 33966.1 26280.800000000003 27189.399999999998 38735.2 39611.5 45298.9 True False 38792.203914614845 36096.65783212561 29849.951888442796 34452.451618791 26011.434177340492 33689.491343024565 27280.930225405573 26647.086087328327 37107.29424928649 37110.42312985911 39727.42247338626 0.9764591181469696 0.9086080995138074 0.7513689544908063 0.8672209137623009 0.6547475914090771 0.8480160364190112 0.6867027490565567 0.6707479224251067 0.9340473642392729 0.9341261229499523 1.0 15.27784757354198 -8.928015680273093 7.383928557424825 0.9711922132822143 0.7935629578610712 0.351550393453796 0.09764888402873288 0.1682578008117224 14.492600590553698 0.017253511843484438 0.018270513994092952 1.1802780207520081e-09 8.928015680273093 -0.17762925542114305 ERNS(ph)SGMAR ddPTM_A549_MK2206_60min_R1 1 ERNSSGMAR 9 1 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;H0Y8X0;P35659-2 A0A494C198 DEK Protein DEK 1 ERNS(0.947)S(0.053)GMAR 54.25899999999999 0.016728 4789200.0 512.43 554.79 538.27 325.37 569.25 594.54 384.56 697.75 859.98 767.23 875.66 True False 598.9156562893347 583.0264413003163 614.6047799053305 405.0856646064146 485.51407908091517 657.4538281762883 454.42957417473195 796.658199269756 665.1959031058658 593.9122101356236 658.2094550134583 0.9099165193199614 0.8857764604557302 0.9337525847190448 0.6154358031792962 0.7376285396431869 0.9988519963798537 0.6904026836950258 1.210341469879777 1.0106143235093221 0.902314917556874 1.0 9.362402940337647 -8.251556498039204 24.99912031110558 1.020552057634651 0.826413048971115 0.38381936520290827 0.12546928082768655 546.4432494522464 1382249.3866730072 0.018780108397705785 0.024099589380887843 5.603295184909571e-09 8.251556498039204 -0.19413900866353595 ERNS(ph)SGMAR ddPTM_A549_PD325901_60min_R1 1 ERNSSGMAR 9 1 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;H0Y8X0;P35659-2 A0A494C198 DEK Protein DEK 1 ERNS(0.975)S(0.025)GMAR 61.343999999999994 0.0063758 5116000.0 450.04 577.0 717.88 609.5 490.69 521.01 500.21 588.7 621.25 736.71 586.49 True False 495.72772949806233 625.625814981676 766.5996537631271 647.1474307250671 456.22562718860206 516.7670673003148 519.2457652754149 576.9579166737841 595.1410229550701 690.1940048722845 514.3554480664274 0.9637843467228925 1.2163297138847033 1.4904083482442734 1.2581716265625909 0.8869851168168865 1.0046886238747024 1.0095076609519182 1.1217105191413699 1.1570617657348299 1.3418619506546923 1.0 9.006621875914156 -6.717703999268691 24.99284502836436 1.0583017648873003 1.2494874880746947 0.180657202630775 0.15754605639364894 133.80371723115255 76462.27664274878 0.019703716405041448 0.041016358797965294 1.9155610631619498e-07 6.717703999268691 0.19118572318739435 ERNT(ph)PRKEDR ddPTM_A549_MK2206_60min_R1 3 ERNTPRKEDR 10 3 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 ERNT(1)PRKEDR;ERNT(1)PRKEDR;ERNT(1)PRKEDR 48.625 0.013675999999999999 84045700.0 2750.59 3442.27 3650.5299999999997 2156.35 1431.6100000000001 916.8000000000001 796.17 1058.2 2008.07 5696.9 5868.9 True False 3214.8223465310034 3617.466839876061 4168.230046608215 2684.6558468022295 1221.0220654423 1013.8151674774131 940.8237832085924 1208.2030906015848 1553.2453512288603 4409.966333331116 4411.490156600144 0.7287384154583741 0.8200101805653757 0.9448576101596916 0.6085598633345349 0.2767822259821882 0.22981240612327292 0.213266662694691 0.27387641085268233 0.3520908573047613 0.9996545785630401 1.0 12.107050350512674 -6.393501318546891 6.086684491486407 0.5545072618538023 0.8280569584319036 0.20841886398294562 0.276250029006306 0.4142551730353222 18.7851048306408 0.048530783815820974 0.11384174715389585 4.041091476094168e-07 6.393501318546891 0.27354969657810135 ERNT(ph)PRKEDR ddPTM_A549_PD325901_60min_R1 1 ERNTPRKEDR 10 3 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 ERNT(1)PRKEDR 50.563 0.011958 63474000.0 1927.4 2005.1 2221.8 2402.4 2219.1 2984.9 1784.0 2487.8 2476.1 2455.9 2667.8 True False 2123.068229123113 2174.0768138990625 2372.584708768759 2550.790791753733 2063.2380714794017 2960.59196404044 1851.8910962422583 2438.1788773586554 2372.0381278696964 2300.834054873485 2339.6775125775644 0.9074191711079795 0.9292207161934621 1.0140648427034467 1.0902317853812213 0.881847203466252 1.2653846302000953 0.7915155342079927 1.0421004024065583 1.0138312289271358 0.9833979437357218 1.0 11.192093975553092 -5.70984682243091 4.877176963060673 1.0096414132386238 0.9141393522462665 0.08997376032260473 0.11192318691176181 0.3209007381860229 15.909815080944966 0.013178700678930629 0.053037148820242894 1.9505324397976453e-06 5.70984682243091 -0.09550206099235725 ERPAGQLS(ph)R ddPTM_A549_MK2206_60min_R1 2 ERPAGQLSR 9 1 A0A087WWA7;O14640-2;O14640 A0A087WWA7 DVL1 Segment polarity protein dishevelled homolog DVL-1 1 ERPAGQLS(1)R;ERPAGQLS(1)R 57.175 0.0039136 37485000.0 772.97 840.27 800.24 639.8800000000001 1349.52 779.01 1074.83 833.96 1228.74 1172.71 1508.96 True False 903.4284386979047 883.0361539166475 913.7260651186982 796.650628725305 1151.0073956983335 861.4443211350132 1270.1126981751281 952.176383895387 950.4323518945804 907.793996517533 1134.2435868226344 0.7965030168067213 0.7785242642546508 0.8055818659537907 0.7023629121474416 1.0147797255108664 0.7594879364036644 1.1197883002654703 0.8394813909089195 0.837943774103263 0.8003518883104673 1.0 10.147514787167285 -6.756702922121883 24.999742049020593 0.9231222621181534 0.7737873094727754 0.294672102465228 0.10257572310563183 104.7913525720963 553097.8483423957 0.013866743928671385 0.02814319976464465 1.7510440756541448e-07 6.756702922121883 -0.149334952645378 ERPAGQLS(ph)R ddPTM_A549_PD325901_60min_R1 2 ERPAGQLSR 9 1 A0A087WWA7;O14640-2;O14640 A0A087WWA7 DVL1 Segment polarity protein dishevelled homolog DVL-1 1 ERPAGQLS(1)R;ERPAGQLS(1)R 75.479 0.00057703 50099000.0 1496.94 1639.2 1364.6599999999999 1687.67 1442.9699999999998 1354.0 1629.87 1692.1 1449.1999999999998 1336.6100000000001 1572.24 True False 1648.9082468110162 1777.3411367729002 1457.2740339672214 1791.9135429233377 1341.6207651762554 1342.973472917269 1691.8955947490865 1658.3497380732288 1388.295163728752 1252.21621649271 1378.8644472505252 1.1958450666408595 1.2889890230449723 1.0568653335525808 1.299557434014952 0.9729895986885917 0.9739706289441117 1.227020972310041 1.2026923613702574 1.0068394804848524 0.9081503399334476 1.0 10.429264920707814 -2.000000004751687 0.1335212516353909 0.9455882112511272 1.9455547257133692 0.3342554557695898 0.11020396524451177 61.18911178352498 0.5274249775105867 0.27409489694609995 11.659941192518898 0.009999999890588362 2.000000004751687 0.9999665144622419 ERPART(ph)PPR ddPTM_A549_PD325901_60min_R1 3 ERPARTPPR 9 2 E7ERS3;Q86VM9;H3BRN6 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 ERPART(1)PPR;ERPART(1)PPR;ERPART(1)PPR 69.721 0.007258499999999999 1312563000.0 4768.14 4682.01 4519.0 4835.1 5419.9 4397.07 4776.0 4849.3 5493.2 5039.9 6083.299999999999 True False 5252.198062680853 5076.579414215522 4825.68651495455 5133.7531456911765 5039.224921639946 4361.261719763911 4957.753293527483 4752.576907297741 5262.339907117571 4721.679853885283 5335.092665215944 0.9844623874903705 0.9515447495999662 0.9045178439762348 0.962261289136087 0.9445430919119711 0.8174669107808991 0.9292721991224893 0.8908143129891399 0.9863633562407058 0.885023025873566 1.0 12.381297614097258 -8.848943921550687 6.905009481819876 0.9939327304303076 0.9222265911095117 0.0 0.05315861427769944 0.1692350013234352 11.238067524671898 0.007311887844323943 0.0077671290109655915 1.4159766067007909e-09 8.848943921550687 -0.07170613932079595 ERPART(ph)PPRR ddPTM_A549_PD325901_60min_R1 1 ERPARTPPRR 10 3 E7ERS3;Q86VM9;H3BRN6 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 ERPART(1)PPRR 47.915 0.014306000000000001 166820000.0 804.93 896.91 941.66 839.32 1221.8 940.12 825.1 709.13 967.39 992.7 1032.1 True False 886.6459010418531 972.4957534059183 1005.5667102615844 891.162890165977 1135.9849829811774 932.4639744157924 856.4996320120445 694.9858458482772 926.7339624893441 930.0207525847583 905.1582430209547 0.9795479496299819 1.0743930808829907 1.1109291861559119 0.9845382252629459 1.2550125812143533 1.030166804097928 0.9462429786348597 0.7678059070961674 1.0238364061032916 1.0274675834369305 1.0 9.822026221157996 -7.519953045674465 24.81365064919318 0.9851177688624752 1.0834151422821154 0.25791129363414456 0.09681235586438924 142.24376595361485 1206407.4960690131 0.014861598351424227 0.02228652883441994 3.0202782441498446e-08 7.519953045674465 0.09829737341964029 ERPAS(ph)SEKVK ddPTM_A549_PD325901_60min_R1 1 ERPASSEKVK 10 2 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 ERPAS(0.983)S(0.017)EKVK 74.46 0.00033145 9462800.0 2804.5 2183.1 2398.5 2865.3 3368.1 3237.1 2825.4 3842.3 3229.9 3346.6 3103.9 True False 3089.21077543622 2367.0774985901166 2561.276633352177 3042.2830734315557 3131.5362753142113 3210.738130857085 2932.922143118206 3765.6623122739634 3094.15853527981 3135.2951048656687 2722.1399772432346 1.1348464080692593 0.8695649446312835 0.9409055576730603 1.117607139553689 1.1503950206431266 1.1794904588663597 1.0774325228081896 1.3833463171454998 1.136664007415712 1.1517758568906675 1.0 11.41052553933735 -6.266565991248462 23.468190835642474 1.106704125836435 0.9705515626705047 0.25267910250905734 0.1116399086145697 221.94467430612752 1016008.0124562036 0.017062557189165228 0.04086108879740579 5.412949916077412e-07 6.266565991248462 -0.13615256316593027 ERPDLEAPAPGS(ph)PFR ddPTM_A549_MK2206_60min_R1 3 ERPDLEAPAPGSPFR 15 1 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR 124.68 1.7971e-07 40278500.0 4184.27 4679.42 5399.700000000001 3978.7200000000003 5774.3 4325.1900000000005 4534.11 4332.5199999999995 6888.599999999999 6854.5 7100.3 True False 4890.472480420305 4917.582490581171 6165.458654680389 4953.506578611528 4924.908119168959 4782.878734971238 5357.899096529529 4946.667977786029 5328.343098833769 5306.063689343 5337.099551689077 0.9163165185615801 0.9213960584686607 1.155207729398481 0.9281270717620117 0.9227686445553244 0.896156927306623 1.0038971626140774 0.9268457389408289 0.9983593236793686 0.9941848822482139 1.0 12.381840206497714 -8.8751707176793 13.006527439122952 0.9992744948161335 0.9613270049420598 0.05905523293716186 0.06814020144380985 1.1738862992752284 129.3201488445668 0.011666206079589283 0.012416070888983041 1.3329973385937994e-09 8.8751707176793 -0.0379474898740737 ERPDLEAPAPGS(ph)PFR ddPTM_A549_PD325901_60min_R1 4 ERPDLEAPAPGSPFR 15 1 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR 181.54 9.7545e-34 843030000.0 13465.900000000001 13807.71 14995.400000000001 16081.2 17371.600000000002 15122.099999999999 14380.099999999999 15668.0 16704.9 14766.1 16568.6 True False 14832.948254928357 14971.334179862468 16013.078018665521 17074.499200944956 16151.478744766593 14998.95063131628 14927.342574592654 15355.489448691784 16002.851145854573 13833.7659260016 14530.767237009015 1.0207959437372105 1.0303195926042608 1.1020118729781279 1.1750583381073785 1.1115365404539495 1.0322201427268638 1.0272921127367305 1.0567569625354847 1.1013080648003395 0.9520327247943114 1.0 13.82682326007046 -7.266666052351913 24.640679869167048 1.0470083728448267 1.0903642591611837 0.1959700679508819 0.053157748148958815 584.946503057002 2757668.991993427 0.008211463003844455 0.013366220172886082 5.411702920377914e-08 7.266666052351913 0.043355886316357006 ERPES(ph)PMVPSEQVVEEAVPLPPQALTTSQDGHR ddPTM_A549_MK2206_60min_R1 2 ERPESPMVPSEQVVEEAVPLPPQALTTSQDGHR 33 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 ERPES(0.959)PMVPS(0.041)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.958)PMVPS(0.042)EQVVEEAVPLPPQALTTSQDGHR 113.51 2.1686000000000001e-16 11823500.0 1456.29 1512.42 1461.68 1184.1 2285.31 1199.01 1298.96 1106.25 2211.9 1937.7199999999998 1892.24 True False 1702.0761491278715 1589.3957179318747 1668.9682031174386 1474.204553156268 1949.1439263318512 1325.8884423615764 1534.9642179894165 1263.0643252485384 1710.9081816784858 1499.9877061950137 1422.344584832772 1.1966693354606388 1.1174477232032654 1.1733923135888078 1.036460903269508 1.370373921422857 0.9321851093611495 1.079178867313567 0.8880157021844601 1.202878824106917 1.0545881231525696 1.0 10.474055307007426 -7.289928929904168 24.97762707981082 1.0691073560008897 1.167240866348231 0.2756655438585792 0.11130403758405849 1109.4446009267779 972680.1717883947 0.017823361232641066 0.028495432601187875 5.1294531803093176e-08 7.289928929904168 0.0981335103473413 ERPES(ph)PMVPSEQVVEEAVPLPPQALTTSQDGHR ddPTM_A549_PD325901_60min_R1 2 ERPESPMVPSEQVVEEAVPLPPQALTTSQDGHR 33 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 ERPES(0.946)PMVPS(0.054)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.927)PMVPS(0.073)EQVVEEAVPLPPQALTTSQDGHR 74.807 5.8403e-06 16302100.0 2910.8999999999996 2920.8 2866.7 2722.9 3783.5 3251.1 3092.3 3554.5 3852.6000000000004 3240.2 3461.8 True False 3206.4124251086796 3166.9460665484903 3061.2515008674923 2891.087348845422 3517.760012366413 3224.624119498768 3209.979168671487 3483.602709048694 3690.6886197773906 3035.613219024008 3036.020546158264 1.0561234274801028 1.0431240561121689 1.0083105349010748 0.9522621157830311 1.1586746396751941 1.0621219686998364 1.0572982362498657 1.1474239571457425 1.215633611059561 0.9998658351852158 1.0 11.56796583883455 -6.765364336069013 24.99632167511135 1.1043231821437194 1.0164925014915411 0.21809113255658852 0.06705566262683943 126.20803545769715 803769.127392067 0.012100636528296646 0.023492343076728144 1.7164678127283302e-07 6.765364336069013 -0.08783068065217825 ERPGGS(ph)PR ddPTM_A549_MK2206_60min_R1 4 ERPGGSPR 8 1 E5RFI7;E5RJV3;E5RG39;Q9H7X3 E5RFI7 ZNF696 Zinc finger protein 696 1 ERPGGS(1)PR;ERPGGS(1)PR;ERPGGS(1)PR;ERPGGS(1)PR 59.426 0.010161 45930900.0 2494.8599999999997 1990.36 1732.3200000000002 1310.04 1782.5300000000002 974.4099999999999 1285.91 1334.2 1568.51 2902.56 2934.67 True False 2915.9313745292234 2091.660822485081 1977.9890247006185 1630.9998588099306 1520.3221983032126 1077.5214194389896 1519.5432019113537 1523.3269358161351 1213.2449893957785 2246.8696800845314 2205.9104462283826 1.3218720549217304 0.948207496846192 0.8966769381243653 0.7393771862310088 0.6892039524553801 0.4884701558403298 0.6888508119218689 0.6905660827803259 0.5499973906330414 1.0185679495403723 1.0 11.107158507411544 -5.1168112960389065 1.1480376055350536 0.7396560039642338 1.7341532040936907 0.5544037092241458 0.15412217501025768 1.4354823252182431 1.2350020418966958 0.02708563035078775 1.8464852328099954 7.641677476324769e-06 5.1168112960389065 0.9944972001294569 ERPGGS(ph)PR ddPTM_A549_PD325901_60min_R1 4 ERPGGSPR 8 1 E5RFI7;E5RJV3;E5RG39;Q9H7X3 E5RFI7 ZNF696 Zinc finger protein 696 1 ERPGGS(1)PR;ERPGGS(1)PR;ERPGGS(1)PR;ERPGGS(1)PR 72.434 0.0015775000000000001 77110100.0 2985.29 2961.66 2733.31 2849.9300000000003 3383.7299999999996 2713.33 2504.59 2545.6099999999997 3267.3900000000003 3344.6099999999997 3930.4300000000007 True False 3288.354443145657 3211.2494821466735 2918.8088533282635 3025.9637034393613 3146.0684780347865 2691.2335400816955 2599.9035430142367 2494.8358115575875 3130.072960954796 3133.4307538052867 3447.012027048592 0.9539724310046053 0.9316037939375038 0.8467649171005105 0.8778512171395754 0.912694372212133 0.7807438787459031 0.7542484687064849 0.7237676549953095 0.9080539714956649 0.9090280884480115 1.0 11.751130617116353 -9.499466852343616 1.5010034573193933 0.9760666189498572 0.8497602873014142 0.2099146998585435 0.07379398214361158 0.2966141491620078 1.3642014343522677 0.018533196694155787 0.014803944575896462 3.166162112481518e-10 9.499466852343616 -0.12630633164844307 ERPGSKEEVDEDRDVDESSPQDS(ph)PPSK ddPTM_A549_MK2206_60min_R1 1 ERPGSKEEVDEDRDVDESSPQDSPPSK 27 3 A0A0G2JQJ7;A0A0G2JPD5;P10636;A0A0G2JS76;A0A0G2JMX7;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau 1 ERPGSKEEVDEDRDVDESSPQDS(0.999)PPSK 82.555 4.6617e-07 4800600.0 837.52 693.45 806.87 696.22 791.79 653.92 686.3 745.9 971.96 823.58 769.3 True False 978.8729006019236 728.7436430355709 921.2962988132603 866.7939312545033 675.3187398778705 723.1173803630344 810.9918263889084 851.6336092229471 751.812611901181 637.5327059988489 578.261578400125 1.6927856478207821 1.2602318228573723 1.5932172103880888 1.4989651113474634 1.167843005835306 1.25050220760591 1.4024653490426904 1.4727480452344075 1.3001254795126094 1.1024988168204244 1.0 9.175578437680219 -13.782544837775637 0.12878422787001964 3.806668767438865e-10 1.5934785405807217 0.5093518053591515 0.14214360180623875 28.59627160947195 0.34279159882716587 7.943259515483323 0.46993597813161636 1.649890653206295e-14 13.782544837775637 1.5934785402000549 ERPISLGIFPLPAGDGLLT(ph)PDAQK ddPTM_A549_PD325901_60min_R1 2 ERPISLGIFPLPAGDGLLTPDAQK 24 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK 155.45 8.5137e-34 325170000.0 2187.23 2677.7 2633.16 2641.6 2776.8 2923.6000000000004 2140.02 1929.31 2678.64 2565.3999999999996 2235.8 True False 2409.2759794463764 2903.3591763889663 2811.86207207739 2804.7656324911195 2581.7671474399526 2899.7911709164896 2221.4596321638774 1890.8283985355845 2566.0660760215187 2403.4202061860956 1960.8107739039356 1.2287141683996132 1.480693198461183 1.4340303049636087 1.4304111696137238 1.3166834769577 1.4788735402259456 1.1329291238751178 0.9643094701948125 1.3086760385922054 1.2257277643374702 1.0 10.93723460105775 -7.772375386874895 24.94629246637659 1.1320952901688157 1.3986379841678347 0.5899247997490114 0.1114260319816798 133.9423321652236 305537.4985637565 0.020706977808661375 0.02876017524824242 1.6889804130419302e-08 7.772375386874895 0.266542693999019 ERPISMINEASNYNVTSDYAVHPMS(ph)PVGR ddPTM_A549_PD325901_60min_R1 2 ERPISMINEASNYNVTSDYAVHPMSPVGR 29 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;Q9HAU0-3;F5H1X3 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 ERPISMINEASNYNVT(0.012)S(0.012)DY(0.074)AVHPMS(0.902)PVGR;ERPISMINEASNYNVT(0.001)S(0.001)DY(0.007)AVHPMS(0.991)PVGR 87.368 1.5171999999999999e-09 6062400.0 2324.1 2183.9 2237.2 2200.1 2929.6 2639.3 2789.2 2739.8 2486.9 2424.3 2612.8 True False 2560.040921088009 2367.9449173977164 2389.0298453764813 2335.995180210367 2723.8350025713366 2617.8064158571246 2895.344532308806 2685.1525396684797 2382.384241427709 2271.2292842663746 2291.4421639038396 1.1172182136714148 1.0333862903890805 1.0425878876673829 1.019443220958553 1.1886989972859914 1.142427444643539 1.2635468518114905 1.171817723338865 1.039687703646395 0.991178970189224 1.0 11.162040157150608 -8.91455062554257 5.618429292018696 1.0171470505359275 1.120775418494956 0.34251467609476083 0.06951006286649139 0.2029244929143646 10.138610232696676 0.013481640208436743 0.014224511429596009 1.2174450674648659e-09 8.91455062554257 0.10362836795902863 ERPLQQVS(ph)PVASVPWR ddPTM_A549_MK2206_60min_R1 2 ERPLQQVSPVASVPWR 16 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 ERPLQQVS(0.999)PVAS(0.001)VPWR;ERPLQQVS(1)PVASVPWR 159.06 6.7395e-21 15699600.0 2215.3 2297.8999999999996 2008.69 1992.1999999999998 3484.1 2743.8999999999996 2234.65 2498.6000000000004 3289.5 3646.1000000000004 3731.8 True False 2589.188481115009 2414.8532948755333 2293.5524464451637 2480.289089433257 2971.593505359362 3034.25767674659 2640.6569792218784 2852.784201641581 2544.433502252081 2822.4434776735757 2805.0910675595815 0.9230318798054542 0.8608823160156602 0.8176392107086012 0.8842098276656304 1.0593572307599401 1.081696673536657 0.9413801247883334 1.017002347850151 0.9070769686153999 1.0061860416279071 1.0 11.453831893493978 -6.585010461436883 10.474297571553572 0.9743052622501955 0.8639546151211497 0.5323573054847281 0.055198523305912135 0.33911382229917447 55.33591448762452 0.008878535878944457 0.01849387838282126 2.600096930369615e-07 6.585010461436883 -0.11035064712904585 ERPLQQVS(ph)PVASVPWR ddPTM_A549_PD325901_60min_R1 1 ERPLQQVSPVASVPWR 16 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 ERPLQQVS(1)PVASVPWR 169.51 1.7626999999999998e-28 14767000.0 2368.3 2200.7 1717.0 2544.3 2016.1 2258.5 1963.3 1975.4 2522.6 2541.3 3032.4 True False 2608.7280725496867 2386.160712357321 1833.5259451597617 2701.455632475452 1874.496091167418 2240.107524803288 2038.0144558589818 1935.9990973286797 2416.5838945778023 2380.841884299028 2659.43402396739 0.9809335554254286 0.8972438085896203 0.6894421627442653 1.0158009592000983 0.704847751165871 0.8423249099676692 0.7663339031884071 0.7279741027154801 0.9086835292017135 0.8952438236265198 1.0 11.376903531254843 -9.260262182659998 1.804666258636242 0.971213438994141 0.8274170332582621 0.14839017548178546 0.10525107607746767 0.29044159751593224 1.9523582375002198 0.020859499903315995 0.018749802129733532 5.492092173148504e-10 9.260262182659998 -0.14379640573587893 ERPLS(ph)ATR ddPTM_A549_MK2206_60min_R1 1 ERPLSATR 8 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 ERPLS(0.995)AT(0.005)R 57.532 0.013705000000000002 5495900.0 790.14 777.46 852.19 888.24 865.62 723.99 690.49 706.69 956.33 1122.0 1041.1 True False 923.4963149317085 817.0293931998494 973.0433562849934 1105.8588398746094 738.2884446798803 800.6021412543333 815.9430951526701 806.8654716473582 739.7227819451996 868.5394207371578 782.5661371017413 1.1800872426602902 1.0440387776370492 1.2434007940705056 1.4131186968684755 0.9434198717237563 1.0230472586245412 1.0426506546456782 1.03105083825325 0.9452527356790399 1.1098607255788262 1.0 9.612068873624006 -6.793225478435239 24.999855457035906 0.9852269624780495 1.2092413672736548 0.5142488865564958 0.09380836623063431 98.36374266005878 77363.10390609397 0.012648550936673941 0.023904987320067055 1.609809631926641e-07 6.793225478435239 0.2240144047956053 ERPLS(ph)ATRK ddPTM_A549_MK2206_60min_R1 1 ERPLSATRK 9 2 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 ERPLS(0.985)AT(0.015)RK 42.976000000000006 0.023802 18940000.0 2224.9 2420.1 2828.1 2569.8 3271.8 2413.6 2098.1 2586.9 3870.4 4442.6 4486.3 True False 2600.4087264175446 2543.2727529171334 3229.1671058209904 3199.4011153627066 2790.522554127252 2669.0055499819846 2479.297611753707 2953.600997048991 2993.7605797587653 3439.0135744802983 3372.227894418924 0.7711248491601802 0.7541817553689889 0.9575767732558346 0.948749970503996 0.8275011777067615 0.7914665418666453 0.7352105757315432 0.8758604369346552 0.8877693541155607 1.0198046164590198 1.0 11.71948632124999 -9.76362341803491 0.7165615604274356 0.9903005594453766 0.8338091199015044 0.47124159362587403 0.07032809326721604 0.46349748038398936 0.5011580087076588 0.0329376445569769 0.016806956858177895 1.723362275431911e-10 9.76362341803491 -0.15649143954387223 ERPPAPS(ph)SFVFQEETKEQSK ddPTM_A549_PD325901_60min_R1 1 ERPPAPSSFVFQEETKEQSK 20 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 ERPPAPS(0.5)S(0.5)FVFQEETKEQSK 55.985 0.001498 5749100.0 1363.3 1590.3 1576.3 1932.2 2219.5 2200.2 1803.0 1708.2 1599.4 2013.3 2188.8 True False 1501.701212391585 1724.320162158335 1683.2771970619292 2051.5476056554135 2063.6099768593263 2182.2823006739845 1871.614151639458 1674.1286109430232 1532.182780063322 1886.1798944080722 1919.5914759463876 0.7823025009272994 0.8982745463110682 0.8768934526717712 1.068741777280486 1.0750255993098403 1.13684725527242 0.9750064923145816 0.8721275500130321 0.7981816960861075 0.9825944311813309 1.0 10.90658359647481 -5.300847480827491 1.765060070541668 0.9420345696466339 0.7408351634420486 0.20240072211933458 0.0985939392825334 1.3865935200612098 4.5155409013598105 0.01734953870810985 0.45260038763251753 5.002101721308266e-06 5.300847480827491 -0.20119940620458532 ERPRS(ph)AVLLVDETATTPIFANR ddPTM_A549_MK2206_60min_R1 4 ERPRSAVLLVDETATTPIFANR 22 2 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 ERPRS(1)AVLLVDETATTPIFANR;ERPRS(1)AVLLVDETATTPIFANR;ERPRS(1)AVLLVDETATTPIFANR;ERPRS(1)AVLLVDETATTPIFANR 251.07 2.7362999999999997e-110 139407000.0 5190.79 5992.42 5891.43 4654.96 6993.15 5697.85 4938.17 5180.049999999999 7844.379999999999 8613.92 7941.6900000000005 True False 6066.868449368926 6297.408582304733 6726.923362768978 5795.425408969098 5964.466898769791 6300.792705073281 5835.371568292174 5914.337950737802 6067.640454900801 6668.029489372744 5969.5491935064165 1.0163026139341262 1.0549219678355204 1.1268729253603307 0.9708313343448567 0.999148630060348 1.055488865378174 0.9775229886102289 0.9907511872372754 1.0164319378590743 1.1170072099625419 1.0 12.54340627128625 -6.278737933036808 24.999332652341145 1.0053556357262174 1.0649214586833302 0.16256496210869387 0.04636902635416068 549.6122858428245 794281.5077048758 0.004250184802709906 0.009898905986282505 5.263347775582314e-07 6.278737933036808 0.05956582295711277 ERPRS(ph)AVLLVDETATTPIFANR ddPTM_A549_PD325901_60min_R1 4 ERPRSAVLLVDETATTPIFANR 22 2 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 ERPRS(1)AVLLVDETATTPIFANR;ERPRS(1)AVLLVDETATTPIFANR;ERPRS(1)AVLLVDETATTPIFANR;ERPRS(0.999)AVLLVDET(0.001)ATTPIFANR 213.92 1.0538999999999998e-73 209008400.0 4581.820000000001 4724.73 5255.32 5423.22 5192.1 5297.08 5193.59 5488.12 5399.01 4974.32 5194.16 True False 5046.962993442388 5122.899578541376 5611.977618006405 5758.199982373743 4827.424807772611 5253.942336721277 5391.234909491499 5378.655141253146 5172.108385263024 4660.240586277239 4555.311248493094 1.1079293418450677 1.124599242309961 1.23196359411508 1.2640629077274503 1.0597354482351853 1.1533662685418677 1.183505278870885 1.1807437182327367 1.1354017548140025 1.0230345045728446 1.0 12.153333916365938 -10.281604644853488 0.5903779110065508 0.9910155016402251 1.1665356912354672 0.5289157092939955 0.053992228923116926 0.5342374266496415 0.3282579827532444 0.04665947348943764 0.0126537553284642 5.2287196307879414e-11 10.281604644853488 0.17552018959524207 ERPRS(ph)LEDLHQK ddPTM_A549_PD325901_60min_R1 1 ERPRSLEDLHQK 12 2 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5;H3BMM1 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 ERPRS(1)LEDLHQK 45.614 0.0096779 8068000.0 2814.2 1963.7 2241.4 2506.2 2409.1 3246.8 2577.8 2624.6 3251.7 2570.8 3000.5 True False 3099.895512295458 2129.1878906057495 2393.5148826331324 2661.002282006828 2239.893126943816 3220.359137273108 2675.8995896262854 2572.25029404113 3115.0423570913495 2408.479249264528 2631.45752173663 1.1780146503180802 0.8091287330378764 0.9095776248949413 1.011227526960306 0.8511986640261624 1.2237929400995355 1.0168887650750775 0.9775002152964923 1.1837707169354486 0.9152643466101069 1.0 11.361646390997794 -7.2488675122431525 24.99165484652464 1.0824334949308763 0.944854199233305 0.11774636451583276 0.12340107157214655 851.2549123807498 1692212.104205558 0.01683097533576948 0.029021809932533723 5.638096278019264e-08 7.2488675122431525 -0.1375792956975712 ERPS(ph)SAIYPSDSFR ddPTM_A549_MK2206_60min_R1 2 ERPSSAIYPSDSFR 14 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERPS(0.5)S(0.5)AIYPSDSFR;ERPS(0.5)S(0.5)AIYPSDSFR 71.685 0.00049395 12501100.0 1274.95 1159.8200000000002 1177.79 745.13 1281.0500000000002 945.46 925.74 1313.6100000000001 1419.4299999999998 1551.79 1711.52 True False 1490.130390465211 1218.849884008243 1344.8183322954994 927.6868834501573 1092.6092419966742 1045.5079496544456 1093.9349750273468 1499.8182402619047 1097.931371363937 1201.2395612350394 1286.5023484510345 1.1582803500198404 0.947413648700878 1.045329092414544 0.7210922580647476 0.8492866284404299 0.8126747307638037 0.8503171225023092 1.1658107286533175 0.853423526731887 0.9337251212027303 1.0 10.329238375309835 -4.971872810934429 1.4700380076158788 0.9176974968926614 1.4182712369014374 0.2705752554155155 0.11554260951326575 2.649007086588555 2.9770894487131514 0.016809456511004534 2.3691041771476926 1.0669085342044992e-05 4.971872810934429 0.500573740008776 ERPS(ph)SAIYPSDSFR ddPTM_A549_PD325901_60min_R1 1 ERPSSAIYPSDSFR 14 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERPS(0.5)S(0.5)AIYPSDSFR 97.352 1.1935999999999999e-05 15553000.0 1179.7 1379.6 1224.0 1658.8 1304.7 1426.5 1565.4 1433.7 1513.9 1633.8 1656.5 True False 1299.4622755507614 1495.8637337066202 1307.0680005099282 1761.2603085918624 1213.0623729706515 1414.8830569545678 1624.9721536197483 1405.1037287841075 1450.2760477290628 1530.6415891739468 1452.7610014186725 0.894477669955203 1.029669527366068 0.8997130286630286 1.2123537917606058 0.8350047748983165 0.9739269264337935 1.1185405941052282 0.9671953799778311 0.9982894958722164 1.0536086718181594 1.0 10.50458166455729 ERPSGPES(ph)PVQGPR ddPTM_A549_MK2206_60min_R1 6 ERPSGPESPVQGPR 14 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 ERPSGPES(1)PVQGPR;ERPS(0.326)GPES(0.674)PVQGPR;ERPS(0.001)GPES(0.999)PVQGPR;ERPS(0.075)GPES(0.925)PVQGPR;ERPS(0.026)GPES(0.974)PVQGPR;ERPS(0.005)GPES(0.995)PVQGPR 107.57 4.7395999999999995e-06 242031500.0 6149.870000000001 5576.789999999999 5528.799999999999 4966.040000000001 6887.380000000001 5245.45 4656.9400000000005 5538.5 7536.0 8740.8 8702.9 True False 7187.817706114191 5860.624790603996 6312.866975942534 6182.7200229340115 5874.255525657118 5800.520037352092 5503.045717592254 6323.599335944888 5829.108032519136 6766.247209250753 6541.729742179182 1.0987640867780308 0.8958830495268525 0.9650149463128984 0.9451200625225498 0.8979667086797574 0.8866951503593944 0.8412218074541059 0.9666555460358057 0.891065247611 1.0343208105379145 1.0 12.675456443399243 -5.2533379249207135 24.753405867094106 0.9333987575300741 1.098764180527376 0.4401197009381045 0.05393327260309552 633.3626715505844 1935142.2354228678 0.007291974526536638 0.11106963844309772 5.580358176006005e-06 5.2533379249207135 0.16536542299730195 ERPSGPES(ph)PVQGPR ddPTM_A549_PD325901_60min_R1 4 ERPSGPESPVQGPR 14 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 ERPS(0.001)GPES(0.999)PVQGPR;ERPS(0.09)GPES(0.91)PVQGPR;ERPS(0.004)GPES(0.996)PVQGPR;ERPS(0.253)GPES(0.747)PVQGPR 138.97 4.2306999999999997e-10 255041100.0 6053.009999999999 5973.0 5928.7 5709.4400000000005 6674.700000000001 5854.65 5876.200000000001 5527.35 5926.699999999999 6068.1 6547.4 True False 6667.507119209556 6476.36567224532 6331.0572341692905 6062.099141720963 6205.892098464947 5806.971671503018 6099.822006580023 5417.102668127811 5677.621409654431 5684.9591304115775 5742.11130738824 1.161159504280356 1.1278718446144247 1.1025660937682047 1.0557265119401296 1.080768338725857 1.0112955602290963 1.0622960231947307 0.9433991049873506 0.9887689572212174 0.9900468357513157 1.0 12.487365581257446 -6.288023509320823 0.525530582306419 0.9910188834209332 1.1867640007325453 0.8242621069822876 0.02680025341649148 0.49843860640935683 0.16904950284228235 0.005295152391567686 0.04918564095322363 5.152007548705807e-07 6.288023509320823 0.19574511731161204 ERPSS(ph)AIYPSDSFR ddPTM_A549_PD325901_60min_R1 1 ERPSSAIYPSDSFR 14 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERPS(0.029)S(0.971)AIYPSDSFR 169.67 4.561600000000001e-23 14529000.0 1164.3 1470.6 1239.0 1704.3 1635.7 1545.7 1159.9 1616.5 1523.2 1763.2 1891.6 True False 1282.498878887641 1594.532623071149 1323.085990712257 1809.5707402538662 1520.8140748586616 1533.1123316752016 1204.0406292216344 1584.2576393802822 1459.1852010706843 1651.8712510904045 1658.9451918403636 0.7730809222605426 0.9611725757511265 0.7975465357264042 1.090795976355557 0.916735575315502 0.924148874366628 0.7257868645352429 0.9549788909076459 0.8795861419941945 0.9957358803746184 1.0 10.696050508046717 -10.739801809973335 0.8727224059600737 1.0034831076004451 0.8945368572242385 0.15363092156587332 0.09579594922784787 1.0056750548699225 1.2889863318749493 0.0729458732365143 0.016488746542182336 1.8205314675162963e-11 10.739801809973335 -0.10894625037620664 ERPT(ph)SPAPHRPPK ddPTM_A549_MK2206_60min_R1 1 ERPTSPAPHRPPK 13 2 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ERPT(0.5)S(0.5)PAPHRPPK 40.801 0.035537 58921000.0 1088.2 1329.0 1110.6 825.86 1302.5 1004.4 887.24 1223.3 1473.3 1666.3 1661.8 True False 1271.8615560643486 1396.6404233820374 1268.0997799670422 1028.1957370742643 1110.903975411317 1110.6849413332393 1048.440023379419 1396.7065211991303 1139.5999023766503 1289.8816727043895 1249.1291966532262 1.0181985654262415 1.1180912487867836 1.0151870465958555 0.8231300171584287 0.8893427344327121 0.8891673850143615 0.8393367364949031 1.1181441639033862 0.9123154797998189 1.0326247086052833 1.0 10.286706986372893 -6.0057499115373405 24.306629917229944 0.9426439614422384 1.0677685096703062 0.2711878971183449 0.084612848776091 173.88563316665204 735086.9136829677 0.011236834228657714 0.033414356617595745 9.868475981976286e-07 6.0057499115373405 0.12512454822806784 ERPT(ph)SPAPHRPPK ddPTM_A549_PD325901_60min_R1 1 ERPTSPAPHRPPK 13 2 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ERPT(0.867)S(0.133)PAPHRPPK 53.995 0.0071854 2987200.0 937.59 784.31 837.32 961.19 1097.1 1014.1 870.35 1134.4 788.21 1205.8 1097.8 True False 1032.7734465827227 850.4065562361843 894.1455704141943 1020.5605232791253 1020.0434807895314 1005.8415058237832 903.4716455237945 1111.7735020804164 755.0842747741101 1129.6655822168848 962.7775595275691 1.0727020341952094 0.8832845633143706 0.9287145941093057 1.0600169407561908 1.059479908619871 1.0447288637651104 0.938401229425335 1.1547563516394783 0.7842769778978093 1.1733401667267847 1.0 9.91105870556347 -8.770717367449127 24.999988994321377 0.8981308109334534 1.011362658248169 0.0 0.11975673788932106 230.232006010964 620369.5985895825 0.017769339958197284 0.01904244944266942 1.6954408097896248e-09 8.770717367449127 0.11323184731471558 ERPT(ph)SPAPHRPPKR ddPTM_A549_MK2206_60min_R1 2 ERPTSPAPHRPPKR 14 3 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ERPT(0.5)S(0.5)PAPHRPPKR;ERPT(0.5)S(0.5)PAPHRPPKR 61.097 0.0015294 8980800.0 1108.8000000000002 924.21 746.31 741.53 976.37 638.72 471.21 685.4100000000001 946.97 1452.21 1831.46 True False 1295.9383324427047 971.2483413799197 852.1479801793649 923.204883288547 832.7472663895186 706.3089264519784 556.8227575589651 782.5689664800909 732.4828070003508 1124.1547523963532 1376.6579362754355 0.9413655333647233 0.7055117439032412 0.6189976156930177 0.6706131268790625 0.6049049981453826 0.5130605852336171 0.4044743017756871 0.5684556387313907 0.5320732098360554 0.8165824804945863 1.0 10.426954416434025 -10.761830145788577 0.9955088199409555 1.0015160750881302 0.607819047307021 0.3727881605656448 0.13853587770454573 0.3433333547313654 0.6004840953650397 0.09559899367236044 0.023939301944819826 1.730493029239075e-11 10.761830145788577 -0.39369702778110927 ERPT(ph)SPAPHRPPKR ddPTM_A549_PD325901_60min_R1 3 ERPTSPAPHRPPKR 14 3 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ERPT(0.758)S(0.242)PAPHRPPKR;ERPT(0.958)S(0.042)PAPHRPPKR;ERPT(0.743)S(0.257)PAPHRPPKR 114.06 1.0602e-06 56501400.0 3878.99 3945.32 4410.56 4275.16 3884.9 4640.780000000001 4131.65 4591.74 4537.1900000000005 4577.22 5361.929999999999 True False 4272.78220923849 4277.805962501745 4709.887124451856 4539.226923607181 3612.038026177423 4602.9870263257035 4288.882201675632 4500.154143549656 4346.507682803242 4288.213548046746 4702.446602074752 0.90862960726727 0.9096979348185149 1.0015822662130434 0.965290477004979 0.768118881899428 0.978849398161126 0.9120533553285533 0.9569814448428093 0.9243077169415452 0.9119111626179351 1.0 12.199195846196982 -10.816515073621831 0.5156088303200331 1.0176643411301192 0.9226550736759869 0.0 0.06332732236605769 2.126139104658986 0.7195378830132224 0.10174826060588572 0.013306756450427958 1.5257554375157047e-11 10.816515073621831 -0.0950092674541323 ERPTS(ph)PAPHRPPKR ddPTM_A549_MK2206_60min_R1 1 ERPTSPAPHRPPKR 14 3 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ERPT(0.391)S(0.609)PAPHRPPKR 45.723 0.0074039 30928000.0 325.92 406.31 309.72 144.35 232.82 323.99 435.14 300.22 432.33 518.02 722.92 True False 380.92732802103717 426.98944350967304 353.64295322473663 179.71575648011776 198.57248641478904 358.2744067528437 514.1993054566075 342.7771043851899 334.40794528914506 400.9989222194853 543.3990124230054 0.7010085026148462 0.7857751555449753 0.6507979314276809 0.33072521732928584 0.36542666047433225 0.659321048736002 0.946264703654508 0.6308018537920296 0.6154003552528127 0.7379456220051617 1.0 9.085868133373392 -7.531204745312111 22.602625893662697 0.8053216700492059 0.5646623206412901 0.2846901048893318 0.16463549875090963 65.82371491052302 178690.58084017946 0.03106745974498911 0.046144923913670755 2.943033832508515e-08 7.531204745312111 -0.24065934940791578 ERPVQSLKT(ph)SR ddPTM_A549_MK2206_60min_R1 1 ERPVQSLKTSR 11 2 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 1 ERPVQS(0.037)LKT(0.557)S(0.406)R 42.317 0.027438 43477000.0 2557.7 2627.8 2884.6 2543.7 4212.1 2504.1 2214.4 2438.7 4043.7 2997.3 3058.5 True False 2989.3772302387283 2761.543795758705 3293.679655405124 3166.9066141910325 3592.5056697351315 2769.082199912947 2616.7278163421224 2784.393193205523 3127.808406461999 2320.2078482847432 2298.9900396942426 1.3003002094938632 1.2011986777141412 1.432663734307945 1.3775208067505242 1.5626451649233426 1.2044776845928507 1.1382075481676022 1.2111375626385217 1.3605141181377132 1.0092291868273264 1.0 11.166784500298498 -7.4913594468942355 24.20476429169248 1.1758937329908812 1.3700746368320007 0.43522961559579476 0.1242821379901965 468.1273781033988 359491.31460141065 0.022722355332104854 0.0362977516436516 3.225823141238769e-08 7.4913594468942355 0.19418090384111952 ERPVQSLKTS(ph)RDT(ph)SPSSGSAVSSSK ddPTM_A549_PD325901_60min_R1 1 ERPVQSLKTSRDTSPSSGSAVSSSK 25 3 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 ERPVQS(0.306)LKT(0.333)S(0.363)RDT(0.413)S(0.378)PS(0.069)S(0.074)GS(0.063)AVSSSK 66.083 7.238399999999999e-05 14796000.0 2176.0 1855.3 1519.8 1612.4 2585.6 2220.6 1970.9 2164.5 2434.6 2642.7 2448.0 True False 2396.905918113465 2011.6526421759165 1622.942767299829 1711.99428597391 2403.996375835761 2202.5161698375837 2045.9036780178615 2121.3273494825985 2332.282228549559 2475.839470993996 2146.9115191505643 1.1164437363780189 0.936998392449744 0.7559430152677898 0.797421910825309 1.1197463679299244 1.0258998334076757 0.9529520242302919 0.9880832677826945 1.0863429665104865 1.1532098313830714 1.0 11.068047019168926 -6.76414037552363 24.999999999918096 1.034252940170595 0.8938116161785775 0.3140030434220874 0.10175134376765624 65.54405327274198 606674.8326925362 0.014121741124001976 0.027568574173760657 1.7213121112180894e-07 6.76414037552363 -0.14044132399201759 ERPVQSLKTS(ph)RDTS(ph)PSSGSAVSSSK ddPTM_A549_MK2206_60min_R1 1 ERPVQSLKTSRDTSPSSGSAVSSSK 25 3 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 ERPVQS(0.088)LKT(0.433)S(0.464)RDT(0.188)S(0.603)PS(0.123)S(0.031)GS(0.032)AVS(0.027)S(0.008)S(0.003)K 56.728 0.0010324000000000002 14596000.0 1199.4 1153.3 1162.4 806.43 1367.7 913.24 1012.2 808.88 1052.5 1465.5 1348.3 True False 1401.829397485371 1211.9980438574146 1327.2457988778053 1004.0053862020185 1166.5131417812345 1009.87845064035 1196.1036378709791 923.5412170911071 814.1104304971323 1134.442532166046 1013.4798988130608 1.3831842142376247 1.1958777330234658 1.3095926228356498 0.990651504166843 1.1509978077980618 0.9964464532775356 1.1801947322998696 0.9112575574243894 0.803282266822045 1.1193537567885172 1.0 9.985101759584017 -6.3553952960659466 0.4885791452615661 0.9105318405073796 1.416571836654643 0.4731005463250195 0.11962463469564297 0.9326279810173806 0.2757026666085722 0.025572820776198817 0.22450364879179152 4.4116871154130303e-07 6.3553952960659466 0.5060399961472634 ERPVQSLKTSRDT(ph)S(ph)PSSGSAVSSSK ddPTM_A549_MK2206_60min_R1 2 ERPVQSLKTSRDTSPSSGSAVSSSK 25 3 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 ERPVQS(0.173)LKT(0.227)S(0.248)RDT(0.673)S(0.643)PS(0.025)S(0.008)GS(0.002)AVSSSK;ERPVQS(0.159)LKT(0.236)S(0.27)RDT(0.685)S(0.641)PS(0.007)S(0.001)GSAVSSSK 101.3 5.2396000000000006e-11 52100000.0 4541.6 4571.9 4381.49 4755.78 6426.4 4218.04 4364.07 4327.75 6230.6 6162.5 7280.1 True False 5308.111048540571 4804.59018183622 5002.851165971364 5920.946313495077 5481.085073000603 4664.3901930916545 5156.965029562937 4941.221815678523 4819.379048223687 4770.38696995787 5472.250249461523 0.9700051727464212 0.8779916785254838 0.914221926613033 1.0819947998682455 1.001614477250917 0.8523715072333611 0.9423847219104042 0.9029597679975886 0.8806941986430392 0.8717413774027024 1.0 12.417918491750271 ERPVQSLKTSRDT(ph)S(ph)PSSGSAVSSSK ddPTM_A549_PD325901_60min_R1 2 ERPVQSLKTSRDTSPSSGSAVSSSK 25 3 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 ERPVQS(0.003)LKT(0.011)S(0.01)RDT(0.981)S(0.982)PS(0.01)S(0.004)GSAVSSSK;ERPVQS(0.063)LKT(0.324)S(0.325)RDT(0.565)S(0.57)PS(0.146)S(0.007)GSAVSSSK 95.12299999999999 6.6244e-08 195514000.0 12882.3 10999.4 13146.0 12459.4 16857.8 14589.4 13262.5 14123.5 16703.2 16049.7 17972.6 True False 14190.101612551973 11926.358040397665 14038.166613319865 13228.98884064954 15673.766284252826 14470.588763500153 13767.211695018466 13841.795712828582 16001.222590942665 15036.319202941067 15762.084137698295 0.9002681046863212 0.7566485457258348 0.8906288337685418 0.8392918553841282 0.9943968162665596 0.9180631594835061 0.8734385360937975 0.8781703987814057 1.0151717533769802 0.9539550145515713 1.0 13.944170686953386 -7.673631761141583 0.3895403044654281 1.016912647080623 0.8233364898354687 0.32889356980339224 0.060304741836999465 0.7715832424818228 0.2460896858996016 0.023276452894406847 0.05568285762742063 2.1201580581207382e-08 7.673631761141583 -0.1935761572451542 ERPVS(ph)EMFSLEDSIIER ddPTM_A549_MK2206_60min_R1 1 ERPVSEMFSLEDSIIER 17 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ERPVS(0.998)EMFS(0.002)LEDSIIER 85.932 9.9126e-06 5855700.0 370.25 734.2 481.24 490.29 609.04 676.91 434.97 588.35 607.35 812.55 485.8 True False 432.7391482565935 771.5676439782486 549.4870683516472 610.4110720099542 519.4510227904095 748.5401669035075 513.9984186571234 671.7504142463076 469.7861947386538 628.9943906595162 365.1624526020806 1.1850592665619748 2.1129435364457634 1.5047742845303596 1.671615106263738 1.422520357963687 2.049882625033181 1.4075883623698575 1.839593335677142 1.2865128695216161 1.7225056578994298 1.0 8.512394619309248 -9.130085786891286 1.317469668803586 1.08172365413076 1.6619669711137077 0.009068283957194834 0.3337857606911448 0.22457041881105205 0.8033829406651357 0.05460250137952472 0.050019541778780534 7.41163823551762e-10 9.130085786891286 0.5802433169829477 ERPVS(ph)EMFSLEDSIIER ddPTM_A549_PD325901_60min_R1 3 ERPVSEMFSLEDSIIER 17 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ERPVS(1)EMFSLEDSIIER;ERPVS(1)EMFSLEDSIIER;ERPVS(1)EMFSLEDSIIER 138.08 3.1989e-13 55019000.0 4061.0600000000004 4512.71 3986.78 4003.1 4656.03 4511.39 4649.02 4704.6900000000005 4653.02 4859.74 5442.7 True False 4473.335821605639 4893.0119090571225 4257.346865255696 4250.362395300271 4329.006515231504 4474.65073558659 4825.941000141362 4610.851267192094 4457.469750712916 4552.895187031585 4773.282404117963 0.9371613583446148 1.0250832644713976 0.8919117925188831 0.8904485499608061 0.906924449200161 0.937436832089855 1.0110319464815176 0.9659707674564284 0.9338374253464258 0.9538290010043723 1.0 12.220765978472691 -7.549810270720261 24.88878044944398 0.9707504715772064 0.9303196473892674 0.21878480222627883 0.03906758946059285 286.84635842281176 265087.9816250992 0.006640285594526745 0.009849267767759264 2.819614461035117e-08 7.549810270720261 -0.040430824187938974 ERQELGS(ph)PEER ddPTM_A549_MK2206_60min_R1 2 ERQELGSPEER 11 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYF0 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERQELGS(1)PEER;ERQELGS(1)PEER 99.90899999999999 7.5845e-05 35095000.0 2575.2 2242.76 2036.0900000000001 1934.7 3236.5 2227.1499999999996 2267.61 2038.9900000000002 3398.3900000000003 3306.1000000000004 3818.5 True False 3009.8308024048088 2356.9069043975173 2324.838178455876 2408.701586851984 2760.415137365624 2462.825534737478 2679.6053845807282 2328.0230766449877 2628.660091113682 2559.2497138138306 2870.261064761312 1.0486261474111251 0.8211472236214566 0.8099744678274439 0.8391925098465874 0.961729638901393 0.8580493129959536 0.9335754916090051 0.8110840875161242 0.9158261328163467 0.8916435320933621 1.0 11.486966247941957 -9.949824692163252 0.7378038872991548 0.995222166672366 0.8819298952820142 0.008725644090134987 0.0765498589365728 0.5838501198337208 0.6468352751147347 0.03205593109405844 0.014330497110501718 1.1224714610551182e-10 9.949824692163252 -0.1132922713903518 ERQELGS(ph)PEER ddPTM_A549_PD325901_60min_R1 4 ERQELGSPEER 11 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYF0 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERQELGS(1)PEER;ERQELGS(1)PEER;ERQELGS(1)PEER;ERQELGS(1)PEER 111.75 1.6564e-05 59448400.0 3389.59 3147.9300000000003 3404.0 3231.21 3785.03 3588.77 2833.66 3202.92 3290.25 3830.32 4219.72 True False 3733.698681515726 3413.217108761295 3635.0159099148686 3430.794503089652 3519.18255044463 3559.544246972901 2941.4964819382503 3139.0352479578687 3151.9722346525855 3588.4729415135 3700.7211910089954 1.0089110983520861 0.9223113367885699 0.9822452766088514 0.9270610581053397 0.9509450641660284 0.9618515049501465 0.7948441209472082 0.8482225722878669 0.8517183737889764 0.9696685473717377 1.0 11.853590733053434 ERRDS(ph)DTYR ddPTM_A549_MK2206_60min_R1 3 ERRDSDTYR 9 2 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 ERRDS(0.981)DT(0.019)YR;ERRDS(0.995)DT(0.005)YR;ERRDS(0.995)DT(0.005)YR 67.153 0.0010360999999999999 72829100.0 2471.7 2959.08 2436.59 2573.13 3627.5699999999997 2632.96 2575.92 2532.3100000000004 3915.76 4102.55 4297.55 True False 2888.862532736862 3109.684532747418 2782.1351007292405 3203.5469655121956 3093.9592584129196 2911.5780795826013 3043.931320751444 2891.2726973741255 3028.846612183802 3175.781105655281 3230.349728653914 0.8942878559284199 0.9626463986743697 0.8612488846179994 0.9917028292930725 0.9577784197694816 0.901319771588897 0.9422915710181787 0.8950339561465743 0.9376218882176331 0.9831075185096532 1.0 11.65747464911114 -10.295842356848727 0.7361886808810422 0.9997685528252707 0.9276185574475553 0.3200664939131702 0.035826762387137966 0.5417143557119476 0.546602076833114 0.02110880949786801 0.0068224464112399226 5.060083029910368e-11 10.295842356848727 -0.07214999537771538 ERRDS(ph)DTYR ddPTM_A549_PD325901_60min_R1 4 ERRDSDTYR 9 2 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 ERRDS(0.991)DT(0.009)YR;ERRDS(0.985)DT(0.014)Y(0.001)R;ERRDS(0.971)DT(0.028)YR;ERRDS(1)DTYR 94.616 0.00019372 78129600.0 3796.15 4065.03 3613.0400000000004 4207.22 4650.06 3891.13 4287.53 4292.09 4910.13 4942.71 4888.22 True False 4181.532353422073 4407.604344324028 3858.242621374503 4467.090424110118 4323.455827436122 3859.4419273800413 4450.69430037644 4206.480897870533 4703.774311537028 4630.626447071835 4286.999928979648 0.9753982791451371 1.028132590935938 0.8999866305789294 1.0420085136724817 1.008503825299841 0.9002663847252804 1.0381838987890426 0.9812178604051718 1.0972181920834734 1.0801554755737945 1.0 12.065752677916644 -8.724940473560475 24.98178559631206 1.045908601179308 0.9846058275082996 0.28840551640802414 0.051269613234162015 193.4826114447184 132429.4973989866 0.009091142971719705 0.010308228222598843 1.883907288967246e-09 8.724940473560475 -0.06130277367100834 ERRPDS(ph)PTRPTLR ddPTM_A549_PD325901_60min_R1 3 ERRPDSPTRPTLR 13 3 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 ERRPDS(0.99)PT(0.01)RPTLR;ERRPDS(0.979)PT(0.02)RPT(0.001)LR;ERRPDS(0.891)PT(0.108)RPT(0.001)LR 73.279 0.00037275 47779300.0 8736.89 8465.51 7937.92 8250.689999999999 8324.130000000001 8158.300000000001 6923.72 7715.599999999999 8447.12 10433.8 11724.740000000002 True False 9623.852641041525 9178.928237409933 8476.634985790663 8760.316382623469 7739.4718254895315 8091.861509675745 7187.205953404958 7561.706305228895 8092.116922051081 9775.008087356555 10282.67130925057 0.9359292300225182 0.8926598897654464 0.8243611733621059 0.8519494710233955 0.7526713236984335 0.7869415705621249 0.6989629189974352 0.7353834502544274 0.7869664096693622 0.9506292473399098 1.0 13.327927486879844 -10.626257669479871 0.9503289656795788 0.9975923253278141 0.8048480137556068 0.4791064674011182 0.06680347192505938 0.36040597073234376 0.5908112090689736 0.04570501655509038 0.012997254051541783 2.36451639969617e-11 10.626257669479871 -0.19274431157220728 ERRPS(ph)PGEMR ddPTM_A549_MK2206_60min_R1 3 ERRPSPGEMR 10 2 A0A0G2JHC2;Q6NYC8;Q6NYC8-2;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 ERRPS(1)PGEMR;ERRPS(1)PGEMR;ERRPS(1)PGEMR 59.57 0.002933 25622500.0 2536.76 2434.3999999999996 2542.52 1734.8600000000001 2766.41 2222.18 1758.12 2527.08 2954.59 3035.76 3632.3 True False 2964.903070172577 2558.300561836895 2903.0875675867137 2159.900777880826 2359.4747536411674 2457.3296126362975 2077.547646526108 2885.301328857921 2285.380082510708 2349.9797075731144 2730.29966361988 1.0859258819384154 0.9370035809347955 1.063285325881683 0.7910856110999885 0.8641816080044978 0.9000219446162646 0.7609229397815104 1.056770935184652 0.8370436816743808 0.8607039508833508 1.0 11.414843587269736 -6.235188412575847 24.809023860783135 0.9065648628301954 1.019564798688009 0.3206940836959338 0.08931366239970642 811.864935656293 767268.7295970801 0.012922445756757911 0.03417772642674638 5.818507352179623e-07 6.235188412575847 0.11299993585781354 ERRPS(ph)PGEMR ddPTM_A549_PD325901_60min_R1 2 ERRPSPGEMR 10 2 A0A0G2JHC2;Q6NYC8;Q6NYC8-2;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 ERRPS(1)PGEMR;ERRPS(1)PGEMR 53.967 0.006606999999999999 36501700.0 1514.3600000000001 1446.72 1289.02 1315.51 1602.7 1555.91 1501.92 1389.1399999999999 1374.19 1557.55 1854.6 True False 1668.0967123870903 1568.6401716642824 1376.500648706952 1396.7660649600207 1490.1318810148414 1543.239184820316 1559.0763874821587 1361.4325129407512 1316.4375731744508 1459.2060271868538 1626.4959572780385 1.0255769188499375 0.9644291857259956 0.8462982293608299 0.8587577846166469 0.9161608268050022 0.9488121860462206 0.9585491931325133 0.8370340589220557 0.8093703321448924 0.8971470360300516 1.0 10.667551521168292 ERRS(ph)DSEEER ddPTM_A549_PD325901_60min_R1 1 ERRSDSEEER 10 2 Q8WUQ7-2;Q8WUQ7 Q8WUQ7-2 CACTIN Cactin 1 ERRS(0.992)DS(0.008)EEER 55.31399999999999 0.0057236000000000006 4445800.0 478.93 430.16 389.09 324.62 348.04 338.87 247.56 204.19 385.81 497.9 492.49 True False 527.5506210303685 466.411092846651 415.49598718824205 344.6710401344892 323.5948710728181 336.1103550719903 256.9810312700298 200.11727026604385 369.59574739041517 466.4625090278542 431.9168521513322 1.2214170815579308 1.0798631507974432 0.9619814210042985 0.7980032231150954 0.7492064027162316 0.7781830076734911 0.5949780148425199 0.46332359867247797 0.8557104117366521 1.0799821926476212 1.0 8.754609797222292 -5.715813129230259 1.8452798754756337 0.8422102302224935 1.2159878176686645 0.39845594035802623 0.16641299770865614 0.4014054794362682 2.3674725530485006 0.0266662082854584 0.19040080229292589 1.923919386118724e-06 5.715813129230259 0.37377758744617096 ERS(ph)DTFINLR ddPTM_A549_MK2206_60min_R1 2 ERSDTFINLR 10 1 P17655-2;P17655 P17655-2 CAPN2 Calpain-2 catalytic subunit 1 ERS(0.997)DT(0.003)FINLR;ERS(0.998)DT(0.002)FINLR 121.04 1.3024000000000001e-05 5997100.0 405.02 525.64 640.53 329.53 585.07 487.57 450.36 547.9300000000001 621.4300000000001 482.52 652.63 True False 473.37747421170974 552.3928308100334 731.3667855774264 410.2648647931638 499.00697803754275 539.1643337772277 532.1845824457364 625.6007554652494 480.6770972197936 373.5183968753057 490.5639593283161 0.9649658626774412 1.1260363104667817 1.4908693793543646 0.8363126907139724 1.0172108418253696 1.099070413805889 1.0848423988880218 1.2752684814469997 0.9798459264678562 0.7614061118283739 1.0 8.93829743588331 ERS(ph)DYDR ddPTM_A549_MK2206_60min_R1 3 ERSDYDR 7 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 ERS(0.982)DY(0.018)DR;ERS(0.998)DY(0.002)DR;ERS(1)DYDR 79.148 0.0047913999999999995 268213000.0 2297.24 2066.05 1613.3600000000001 1762.77 2747.9399999999996 1702.43 1703.14 1925.85 2757.24 2598.19 2349.59 True False 2684.9579498743487 2171.2031201869536 1842.1587079125047 2194.648729133752 2343.7216661741054 1882.580012618425 2012.578492198756 2198.845135168269 2132.7295424075173 2011.2570744786758 1766.1219576149088 1.5202562531413735 1.2293619423197104 1.0430529443166434 1.2426371348089433 1.327044067409267 1.065939984779301 1.1395467246875062 1.245013191579215 1.2075777288266663 1.1387985217027787 1.0 10.786369254812199 -14.999999999999998 0.12107549606255266 0.29302162629428163 1.3271270722081623 0.2301922310854494 0.12218337107152448 69.86972967362232 0.5881144745660103 12.200297352913653 0.43800707190746824 1.000000000000004e-15 14.999999999999998 1.0341054459138808 ERS(ph)DYDR ddPTM_A549_PD325901_60min_R1 4 ERSDYDR 7 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 ERS(0.997)DY(0.003)DR;ERS(0.93)DY(0.07)DR;ERS(1)DYDR;ERS(1)DYDR 90.10799999999999 0.0035054 461418000.0 3223.7700000000004 2753.58 3280.1599999999994 3255.83 3108.13 3136.6400000000003 3045.59 3145.5099999999998 3489.89 3517.7999999999997 3946.11 True False 3551.04475718596 2985.6338502898493 3502.7713828044516 3456.9352245735777 2889.825671266399 3111.096243789676 3161.4915940607966 3082.7703354451414 3343.2220597193873 3295.6855076484967 3460.7634864523015 1.0260870964129962 0.8627095905217386 1.0121383320520447 0.9988938100237967 0.8350254741703882 0.898962398317177 0.9135243152087533 0.890777525685626 0.9660359839113396 0.9523001269950898 1.0 11.756874633683006 -9.074684564149887 2.757569185832959 0.9871574380787969 0.9279209785179204 0.08193586303405309 0.05940944587207504 0.3230797093996669 5.080833648212282 0.010928892722535234 0.010743554162603135 8.420064839735473e-10 9.074684564149887 -0.05923645956087642 ERS(ph)DYDRS(ph)R ddPTM_A549_PD325901_60min_R1 2 ERSDYDRSR 9 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 2 ERS(0.974)DY(0.027)DRS(0.999)R;ERS(0.994)DY(0.006)DRS(1)R 51.875 0.020788 26050000.0 1924.6399999999999 1860.5700000000002 1681.1100000000001 1271.03 1512.9499999999998 1504.45 1427.53 1377.23 1535.12 1775.52 1946.27 True False 2120.028035954916 2017.3667635709828 1795.2002339356586 1349.5386363814296 1406.6856113941503 1492.198257998807 1481.8554353243899 1349.7600672339659 1470.604244923601 1663.4133641878607 1706.8911284220471 1.2420405734458282 1.181895394485973 1.051736812057398 0.7906413091671666 0.8241214615103045 0.8742199389004295 0.8681604881819887 0.7907710367454808 0.8615688607410574 0.9745280975978943 1.0 10.737155325749066 -5.9254998713802784 2.9629434943420265 0.8985208547838068 1.2176524162207185 0.7871238416289486 0.06806037234589112 0.108207048731233 1.8937416526456656 0.011734665069062868 0.0437056461057254 1.1871350526229158e-06 5.9254998713802784 0.3191315614369117 ERS(ph)EREQR ddPTM_A549_PD325901_60min_R1 2 ERSEREQR 8 2 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0 Q15424-2 SAFB Scaffold attachment factor B1 1 ERS(1)EREQR;ERS(1)EREQR 54.343 0.0076003 34381000.0 3564.9 4648.9 3256.75 3211.5 3641.32 2810.77 2015.05 2858.24 2961.95 4771.5 5484.6 True False 3926.8060236593246 5040.679118315971 3477.772639428687 3409.8670611543107 3385.5662450720415 2787.880021027822 2091.73383042767 2801.230160954098 2837.469541958582 4470.226675690717 4810.02896974395 0.8163788718030025 1.0479519250347258 0.7230253001186846 0.7089078013049527 0.703855687017258 0.5795973451644778 0.43486927908025014 0.5823728253144418 0.5899069547827749 0.9293554579004287 1.0 12.23182986771771 -5.78308846419518 24.083514457494957 0.7304301768235348 0.9321653679093962 0.21668851363496378 0.16294199487447245 210.55305327825252 234230.59344307872 0.028363406550704226 0.08831744779173278 1.64782670107405e-06 5.78308846419518 0.20173519108586135 ERS(ph)ESLDPDSSMDTTLILK ddPTM_A549_MK2206_60min_R1 1 ERSESLDPDSSMDTTLILK 19 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 ERS(0.822)ES(0.172)LDPDS(0.003)S(0.003)MDTTLILK 78.837 7.2689e-05 4158600.0 1798.8 1509.8 1918.1 2061.1 3147.9 2930.7 2024.8 3029.9 3918.9 3185.0 3337.8 True False 2102.3934635623523 1586.6423711228001 2190.1154222535415 2566.0695925262935 2684.8480799979147 3240.824728758784 2392.679950564274 3459.3976036795916 3031.2754071973504 2465.5062879214333 2508.9321414063907 0.8379634621699447 0.6323974829520109 0.8729273247804401 1.0227736135931815 1.0701158615206363 1.2917147798752853 0.953664673139804 1.3788326701177396 1.2081934609431717 0.9826914993959881 1.0 11.292857735648152 -6.2501171496837316 1.9003559622741397 1.1237024382518015 0.7333354510782301 0.57359251585766 0.13231489256558265 0.18780790266834826 1.290201006885518 0.019237131765032625 0.06536300522449918 5.621896556971273e-07 6.2501171496837316 -0.39036698717357143 ERS(ph)ESLDPDSSMDTTLILK ddPTM_A549_PD325901_60min_R1 5 ERSESLDPDSSMDTTLILK 19 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 ERS(0.581)ES(0.418)LDPDSSMDTTLILK;ERS(0.884)ES(0.116)LDPDSSMDTTLILK;ERS(0.572)ES(0.428)LDPDSSMDTTLILK;ERS(0.975)ES(0.025)LDPDSSMDTTLILK;ERS(0.939)ES(0.061)LDPDSSMDTTLILK 159.76 3.6208e-27 53285700.0 12807.1 12704.7 12462.100000000002 13538.2 14979.4 13014.2 12718.2 13490.4 14213.8 13777.9 14392.799999999997 True False 14107.267363911287 13775.369656148523 13307.85304669508 14374.423866516989 13927.298620124613 12908.216670044256 13202.198060666082 13221.32338898593 13616.443415820973 12907.961042648874 12622.576843476412 1.1176218246753784 1.0913278506415192 1.054289723225003 1.1387867980337125 1.1033641381492167 1.0226292800677594 1.0459194049184362 1.0474345732202026 1.0787372170253977 1.0226090284663194 1.0 13.623718839775853 -7.253970709706684 24.557800827482424 1.0387202844785712 1.1000319689312754 0.5963022167524452 0.026521745928901604 338.2028167567365 1112044.1271765833 0.00496901230283624 0.008502010917063449 5.5722332869647345e-08 7.253970709706684 0.061311684452704185 ERS(ph)GGEQAQDWDALPPK ddPTM_A549_PD325901_60min_R1 1 ERSGGEQAQDWDALPPK 17 1 Q92979;V9GYP5;A0A087WWQ2 Q92979 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 1 ERS(1)GGEQAQDWDALPPK 63.158 0.00083301 8622200.0 1605.8 1669.7 1634.5 1607.7 1591.0 1811.5 1457.5 1631.4 1876.2 1992.3 2038.6 True False 1768.8196338725188 1810.4114788126597 1745.4269990469604 1707.0039776483832 1479.2536486520323 1796.7477446009116 1512.9659600746027 1598.860447191459 1797.349838661251 1866.505837991956 1787.8651237501385 0.9893473564506529 1.0126107695502382 0.9762632403644845 0.9547722336391098 0.8273854828317374 1.0049682835314453 0.8462416655351939 0.8942847119461491 1.0053050505796643 1.0439858204051011 1.0 10.804022188612644 -8.78762530519607 24.82242288775867 1.0025051799672913 0.9379954297226883 0.24777653337297423 0.059340635751201895 239.06802832582505 226618.57293318462 0.010133662518266424 0.010789793448760998 1.630702341523152e-09 8.78762530519607 -0.06450975024460293 ERS(ph)GVSLAALK ddPTM_A549_PD325901_60min_R1 1 ERSGVSLAALK 11 1 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 1 ERS(0.95)GVS(0.05)LAALK 51.54600000000001 0.0068035 4030000.0 678.55 502.15 443.4 721.38 944.23 776.49 586.15 791.93 595.02 1042.0 723.61 True False 747.4358964778918 544.4679427955781 473.49179038080274 765.9380042271509 877.9105422166623 770.1665228844386 608.4562590035872 776.1343348929338 570.013378637788 976.207942171167 634.6105573417237 1.1777867352361333 0.8579560117566626 0.7461139511516791 1.2069417934607576 1.3833847106075277 1.2136049644533742 0.9587868527625943 1.2230088609682594 0.8982097320055273 1.5382787614822182 1.0 9.309727711814798 -8.784766394398236 24.999905831807396 0.9519323692858518 1.0889847090375266 0.0 0.24842203742820537 408.62128033301343 437923.56326260953 0.03239267277820907 0.03449446866012309 1.6414724785306036e-09 8.784766394398236 0.13705233975167486 ERS(ph)HERPDR ddPTM_A549_MK2206_60min_R1 4 ERSHERPDR 9 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ERS(1)HERPDR;ERS(1)HERPDR;ERS(1)HERPDR;ERS(1)HERPDR 90.61399999999999 0.00021708 616908000.0 3398.6400000000003 2989.96 3109.9700000000003 3076.3700000000003 3790.5200000000004 3902.26 3055.8199999999997 3708.74 4595.35 4146.42 4153.6900000000005 True False 3972.2473432296806 3142.1361928482766 3551.0105102684174 3830.0807881035 3232.9395292714808 4315.1945630894525 3611.0229388252305 4234.465252539899 3554.5105622660317 3209.740842186242 3122.214136987931 1.2722533333545776 1.0063807461584184 1.1373372723544695 1.2267194433366007 1.0354637406101712 1.3820943643706693 1.1565583846561096 1.3562379346039926 1.1384582883527479 1.0280335368933888 1.0 11.608353772578866 -9.90640370276648 1.038978879320181 1.0199687279893832 1.1872508056850977 0.2654012375398762 0.11203767181870931 0.4279653600182561 0.939507330978228 0.036119908018983606 0.020792170072954023 1.2404986535863728e-10 9.90640370276648 0.16728207769571446 ERS(ph)HERPDR ddPTM_A549_PD325901_60min_R1 3 ERSHERPDR 9 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ERS(1)HERPDR;ERS(1)HERPDR;ERS(1)HERPDR 100.02 0.00016217 696349000.0 1975.62 1668.51 1960.5 2100.21 2722.79 1979.66 1756.9699999999998 1999.63 2104.6 2077.62 2053.79 True False 2176.183488025424 1809.1211933363543 2093.551319444211 2229.935201777018 2531.550623515567 1963.5383053141823 1823.8324548008738 1959.7458109706106 2016.150980943646 1946.4387186311533 1801.1868500474825 1.2081941903851097 1.0044050639658304 1.1623176792507792 1.238036576670673 1.4054902873895792 1.0901358208685679 1.0125726016447403 1.088030267886393 1.1193458251654993 1.0806423101411393 1.0 10.814732134787073 -7.501969558889703 24.72967329928765 1.0574080797744805 1.1977858427580352 0.3597848714913511 0.09251213567713122 640.8145966982707 757903.7683456545 0.014976834810574987 0.023781882819047903 3.147968957733432e-08 7.501969558889703 0.14037776298355475 ERS(ph)KDFQVK ddPTM_A549_PD325901_60min_R1 1 ERSKDFQVK 9 2 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 ERS(1)KDFQVK 42.556000000000004 0.025230000000000002 3666200.0 2223.2 2382.9 2176.9 2824.5 2798.2 3116.2 2774.0 2620.1 2923.1 2841.9 3294.3 True False 2448.8976273666613 2583.7153457882773 2324.6375247631254 2998.962950095081 2601.664085265946 3090.8227003728157 2879.566087991045 2567.8400500713115 2800.2522723540674 2662.461948998313 2889.1219842882806 0.8476269401860973 0.8942908467829064 0.8046172980597727 1.0380188051609247 0.9005033707176099 1.0698138455840323 0.9966924566185843 0.8887959954739969 0.9692398893444072 0.9215470871349157 1.0 11.49641540321068 -6.259436620339425 24.99920304688452 0.9818499483389584 0.8533896086017566 0.48813705009289254 0.05608348514168322 97.42824911398486 1216125.324874643 0.006947015278508124 0.01742529692352418 5.502542171350487e-07 6.259436620339425 -0.12846033973720183 ERS(ph)KDKDR ddPTM_A549_PD325901_60min_R1 1 ERSKDKDR 8 3 P08621-4;P08621;P08621-2 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 ERS(1)KDKDR 50.284 0.009314 67022000.0 3225.3 2891.3 2434.8 1928.4 3579.8 1169.7 1426.6 1112.6 2552.8 2959.1 3950.7 True False 3552.7300816596326 3134.959998018231 2600.0401696418107 2047.5128882858403 3328.3671976395663 1160.174351012799 1480.8900436654744 1090.408320182185 2445.514693601132 2772.2619209968343 3464.7889455507097 1.0253813832504435 0.9048054722190144 0.7504180515758798 0.5909488053854314 0.9606262459113625 0.3348470481882109 0.42741132777139323 0.31471132508155425 0.7058192380639885 0.8001243263480218 1.0 11.758551759252299 -5.587251858775928 2.8184463833779962 0.7409196355325203 1.015012644515915 0.14180304503177832 0.23119635868691915 0.528409757571447 7.809816573110195 0.03836618478892882 0.23562945389803408 2.586712377651988e-06 5.587251858775928 0.27409300898339484 ERS(ph)KTEEDILR ddPTM_A549_MK2206_60min_R1 1 ERSKTEEDILR 11 2 Q63HQ0-2;Q63HQ0 Q63HQ0-2 AP1AR AP-1 complex-associated regulatory protein 1 ERS(0.5)KT(0.5)EEDILR 47.532 0.010503 4315100.0 1225.3 1185.3 957.4 1035.3 1536.1 1218.3 908.59 1148.5 1691.4 1478.4 1704.5 True False 1432.100684291166 1245.626707174364 1093.1737163159062 1288.9485464763834 1310.1417248593657 1347.219697357911 1073.6690420205423 1311.3033921337376 1308.300600610783 1144.428413206607 1281.2256081931798 1.1177583987809567 0.9722149629298945 0.8532249974752927 1.0060277739016585 1.022569106081921 1.0515085623817633 0.8380015472330906 1.0234757904839058 1.0211321037016932 0.8932294249258037 1.0 10.323308823700692 ERS(ph)LS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ERSLSPR 7 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 ERS(1)LS(1)PR 60.518 0.008359 7176100.0 385.98 419.73 448.61 407.4 566.56 396.08 297.43 389.33 397.27 467.85 601.37 True False 425.1644054565419 455.1021201425629 479.055372311078 432.5641727274686 526.7667801258929 392.85445579990534 308.748861409941 381.56450772652346 380.57412344363905 438.3098711562195 527.4053023985193 0.8061435930260672 0.8629077449029465 0.9083249071111783 0.820174106631589 0.9987893138925176 0.7448815057666137 0.5854109922782752 0.7234749176605827 0.7215970747978349 0.8310683816846094 1.0 9.042768265538431 -5.214088756967593 16.76886118315055 0.8390889237003462 0.8061351273628574 0.0 0.11968827693733632 2397.5570123730877 847688.3348413669 0.01972963658012923 4.3239505584104485 6.108171791543339e-06 5.214088756967593 -0.03295379633748874 ERS(ph)LSR ddPTM_A549_MK2206_60min_R1 2 ERSLSR 6 1 P84103 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 ERS(0.993)LS(0.007)R;ERS(1)LSR 75.825 0.03785 76334000.0 3472.6000000000004 5886.2 3464.6000000000004 2600.5 4517.799999999999 2589.27 3366.7 3141.1 2968.3999999999996 5266.0 4985.700000000001 True False 4058.689983081288 6185.782438007039 3955.932376799762 3237.622616740882 3853.237604693473 2863.2648327816787 3978.3858107293277 3586.3605442153084 2296.0621395607463 4076.4069426041615 3747.6130916800994 1.0830066721913731 1.650592600324672 1.0555871911062917 0.8639159212909616 1.0281844764732693 0.7640235965495689 1.061578587064272 0.9569719329290475 0.6126732091576172 1.0877342038467104 1.0 11.871756299684916 -5.973588707385106 5.725410633946642 0.857614950367009 1.3697687243470236 0.42520265687649084 0.18699307198798643 0.0983605155840183 9.673519993431412 0.02655003752906707 0.08281630973425162 1.0627014976272315e-06 5.973588707385106 0.5121537739800146 ERS(ph)MS(ph)ENAVR ddPTM_A549_PD325901_60min_R1 1 ERSMSENAVR 10 1 A0A0A0MS29;Q9GZY8-2;H7C433;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 2 ERS(1)MS(1)ENAVR 42.468999999999994 0.042999 4659100.0 223.47 215.42 289.93 267.95 319.66 114.24 105.6 359.69 252.87 354.95 455.02 True False 246.15650989008088 233.57419941655567 309.60639329072177 284.5006629413972 297.2081843671333 113.30966731615125 109.61866578653724 352.51570077865387 242.2427532791124 332.538396423854 399.055424609432 0.6168479231450166 0.5853176902560892 0.7758481007838528 0.7129352099895568 0.7447792112036071 0.28394468619754 0.2746953406129598 0.8833752883416432 0.6070403716882259 0.8333138103543379 1.0 8.640445325335266 -10.58605694666458 0.6679243528748086 1.0287793861503876 0.6027389110473108 0.28188182709775844 0.18402828433090798 0.7498112140767759 0.5361734619172472 0.17955884383101497 0.038203804802182606 2.593839223841516e-11 10.58605694666458 -0.42604047510307674 ERS(ph)MSENAVR ddPTM_A549_MK2206_60min_R1 5 ERSMSENAVR 10 1 A0A0A0MS29;Q9GZY8-2;H7C433;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 ERS(1)MSENAVR;ERS(0.982)MS(0.018)ENAVR;ERS(1)MSENAVR;ERS(0.56)MS(0.44)ENAVR;ERS(0.971)MS(0.029)ENAVR 137.81 1.0372999999999999e-07 74494400.0 7274.299999999999 9256.8 7051.5 5389.6 7958.799999999999 5539.98 4915.2 6065.08 7500.3 8412.6 8891.170000000002 True False 8502.02400044008 9727.931581010424 8051.508732610837 6710.05224194834 6788.071062958612 6126.217006458896 5808.228216620669 6924.823663528502 5801.4940255179445 6512.187817195552 6683.2471051915245 1.2721397049400935 1.4555696397120792 1.2047300669694603 1.0040107954015338 1.0156845850702814 0.9166527752206066 0.8690727912946472 1.0361465848164317 0.8680651686530284 0.9744047638365647 1.0 12.706333501785533 -6.173063365050611 2.0537916903411753 0.9420691584538233 1.368006386855899 0.848738233787376 0.06763738128603834 0.08672569069344938 0.6982202555155435 0.01006945417643207 0.03518705352398463 6.713308963056602e-07 6.173063365050611 0.4259372284020756 ERS(ph)MSENAVR ddPTM_A549_PD325901_60min_R1 8 ERSMSENAVR 10 1 A0A0A0MS29;Q9GZY8-2;H7C433;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 ERS(1)MSENAVR;ERS(0.986)MS(0.014)ENAVR;ERS(1)MSENAVR;ERS(0.944)MS(0.056)ENAVR;ERS(0.995)MS(0.005)ENAVR;ERS(0.975)MS(0.025)ENAVR;ERS(0.723)MS(0.277)ENAVR;ERS(0.999)MS(0.001)ENAVR 149.32 8.442200000000001e-09 161652300.0 12413.79 11310.61 11887.330000000002 11666.85 14613.730000000001 13737.94 13397.220000000001 13125.910000000002 13624.1 13511.439999999999 13932.19 True False 13674.028822250808 12263.794799289244 12694.075698122306 12387.484827161192 13587.31201943159 13626.062771439483 13907.05853834009 12864.10342797281 13051.526456083984 12658.32537252322 12218.618953429042 1.1191141056423008 1.0036972955808172 1.0389124782846126 1.0138203731842181 1.1120170021848859 1.1151884532429466 1.1381857959026707 1.0528279404574294 1.0681670740228129 1.0359865890547948 1.0 13.576793608925806 -10.399041623388941 0.7991682123694914 1.0008758765965504 1.0723864053829697 0.1829593906400837 0.043324254422192905 0.6771028019227096 0.7967018812643692 0.02771532580551227 0.008663714445403961 3.989866610914794e-11 10.399041623388941 0.07151052878641928 ERS(ph)PALK ddPTM_A549_MK2206_60min_R1 8 ERSPALK 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK 87.806 0.0035869 4098645000.0 39088.4 42454.5 38731.200000000004 37516.399999999994 52492.0 42859.9 40239.80000000001 41207.899999999994 55549.700000000004 58610.9 59652.9 True False 45685.5663003728 44615.25271216908 44223.86655668961 46707.91968417516 44770.49633573194 47395.30616990096 47550.85078759206 47049.24601890099 42967.78164464278 45370.65698296207 44839.43859371482 1.0188701672722678 0.9950002522650414 0.9862716381754277 1.0416704835979425 0.9984624638455545 1.057000436587634 1.0604693608777096 1.0492826737910121 0.9582586890520438 1.0118471240030582 1.0 15.452480594732622 -8.7629217437497 24.99961573114094 0.9802888254760336 1.025331902070807 0.235704346605369 0.027231912669582543 33.479177572393844 564606.0050033025 0.005021958602138574 0.00549017441373183 1.7261489016312167e-09 8.7629217437497 0.04504307659477336 ERS(ph)PALK ddPTM_A549_PD325901_60min_R1 9 ERSPALK 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK 83.499 0.0040381 6072624000.0 54664.6 54285.700000000004 55393.200000000004 53740.50000000001 67065.7 57407.3 58551.799999999996 60432.50000000001 61697.8 59887.50000000001 62056.700000000004 True False 60214.109950048405 58860.54645468074 59152.515658371376 57059.92863146916 62355.236596104725 56939.79398212968 60780.02078977439 59227.12637912086 59104.85602587898 56106.19302953533 54424.119309832895 1.106386482935139 1.0815158279290027 1.0868805303328848 1.0484309044420321 1.1457279858057143 1.0462235256022283 1.1167846454943582 1.0882514431137555 1.0860048224096923 1.030906769664503 1.0 15.731958536485362 -10.547520114688497 0.6604393460160081 0.9935876521716479 1.0902670535887908 0.49873172429538637 0.028080723082038184 0.4263774351611012 0.30224027688092586 0.022835167053197113 0.005040797494638667 2.834522347330595e-11 10.547520114688497 0.09667940141714293 ERS(ph)PALKS(ph)PLQSVVVR ddPTM_A549_MK2206_60min_R1 5 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 ERS(1)PALKS(0.993)PLQS(0.007)VVVR;ERS(1)PALKS(0.817)PLQS(0.183)VVVR;ERS(1)PALKS(0.97)PLQS(0.03)VVVR;ERS(1)PALKS(0.927)PLQS(0.073)VVVR;ERS(1)PALKS(0.962)PLQS(0.038)VVVR 102.9 6.517799999999999e-07 455122000.0 17033.379999999997 19548.4 18053.100000000002 13072.900000000001 33259.799999999996 24077.0 23265.300000000003 23096.1 34146.2 25539.0 28414.899999999998 True False 19908.198117841715 20543.330062032685 20613.30104243023 16275.761086864783 28367.32747899065 26624.812158980887 27492.30385907895 26370.042903839774 26412.140220276633 19769.722162394188 21358.696118655535 0.9320886447021035 0.9618251014905972 0.9651010964300275 0.7620203497651191 1.3281394763706338 1.2465560636787054 1.287171450277158 1.2346279359631476 1.2365989044250327 0.9256052922222404 1.0 14.382535957260023 -6.759087566782408 24.999997487124535 1.1599350077468995 0.9135737118614462 0.5230006817300883 0.12512747519999562 45.2743750545855 481260.4383644038 0.01908962101074102 0.03829822941587908 1.7414557083316845e-07 6.759087566782408 -0.2463612958854533 ERS(ph)PALKS(ph)PLQSVVVR ddPTM_A549_PD325901_60min_R1 4 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 ERS(1)PALKS(0.829)PLQS(0.171)VVVR;ERS(1)PALKS(0.978)PLQS(0.022)VVVR;ERS(1)PALKS(0.969)PLQS(0.031)VVVR;ERS(1)PALKS(0.928)PLQS(0.072)VVVR 133.96 2.4827e-10 549581700.0 31293.280000000002 34012.98 36439.07 32103.799999999996 36269.299999999996 31895.7 31270.920000000002 37714.18000000001 33993.8 36874.09 39336.17 True False 34470.15074870483 36879.3731931637 38912.04441612854 34086.77881298014 33721.86949029236 31635.95199418565 32460.95197270403 36961.94109369817 32565.158802623842 34545.85366442843 34498.07046252649 0.9991906876689817 1.0690271281468886 1.1279484299968814 0.988077836121498 0.9775001627097585 0.9170354043003704 0.940949784654325 1.071420534486068 0.9439704414192592 1.0013850978115963 1.0 15.07422805123758 -6.419796827025567 7.252005318967945 0.9741940075046671 1.0654979195456924 0.39232671113066186 0.04716933667017554 0.19091237844639208 11.832180838145014 0.006581128779413277 0.015350838814356239 3.803672992984881e-07 6.419796827025567 0.09130391204102528 ERS(ph)PALKSPLQS(ph)VVVR ddPTM_A549_PD325901_60min_R1 1 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 ERS(1)PALKS(0.293)PLQS(0.707)VVVR 156.08 2.7086e-20 118310000.0 30720.0 34854.0 35770.0 33028.0 35822.0 30372.0 30181.0 37693.0 35949.0 36291.0 37029.0 True False 33838.67178513126 37791.26890012364 38197.5673024838 35068.06454796964 33305.98629919114 30124.660501804512 31329.55447067689 36941.18354541354 34438.188546015 33999.5800665392 32474.667746170875 1.0420020937433982 1.1637153363818373 1.1762265776218055 1.0798590711402907 1.0255989856314478 0.9276356801327565 0.96473826046676 1.1375384602593608 1.0604631528547555 1.0469569798923695 1.0 14.98702714484066 -6.565188200261577 3.8343524548708428 1.0249031225510483 1.1311272240579844 0.3702901669060834 0.05978289125121654 0.1837743555518824 5.723097289519499 0.008934068105604053 0.019942778886039125 2.7215216889268743e-07 6.565188200261577 0.10622410150693606 ERS(ph)PALKSPLQSVVVR ddPTM_A549_MK2206_60min_R1 8 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ERS(1)PALKSPLQSVVVR;ERS(1)PALKSPLQSVVVR;ERS(1)PALKSPLQSVVVR;ERS(1)PALKSPLQSVVVR;ERS(1)PALKSPLQSVVVR;ERS(1)PALKSPLQSVVVR;ERS(1)PALKSPLQSVVVR;ERS(0.999)PALKS(0.001)PLQSVVVR 148.04 3.1892e-15 989179500.0 24564.8 28421.9 30085.399999999998 24956.3 40941.600000000006 28664.2 27099.6 26705.5 46339.3 42659.700000000004 42136.0 True False 28710.737688301324 29868.453310249773 34351.96211076935 31070.594620330867 34919.14487500959 31697.42661824396 32023.24653709583 30491.086407163708 35843.5225386563 33022.84414155163 31672.46830556047 0.9064887968728608 0.9430415407505837 1.0846000942950969 0.9809969441149007 1.1025078480820243 1.0007880128710749 1.0110751782321235 0.9627000369216769 1.1316933746007904 1.0426356361923987 1.0 14.950941683714703 -5.646997393651207 5.119533984828375 1.0475075859809833 0.9155701581204291 0.3950623985328172 0.0514687745385223 0.15062389912342086 5.973930882526113 0.00828866071553289 0.034061812617961866 2.2542527406487043e-06 5.646997393651207 -0.13193742786055418 ERS(ph)PALKSPLQSVVVR ddPTM_A549_PD325901_60min_R1 5 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ERS(1)PALKSPLQSVVVR;ERS(0.998)PALKS(0.001)PLQS(0.001)VVVR;ERS(1)PALKSPLQSVVVR;ERS(0.999)PALKS(0.001)PLQSVVVR;ERS(1)PALKSPLQSVVVR 162.85 2.7194000000000002e-21 1402852900.0 11647.800000000001 11830.500000000002 14923.300000000001 15139.5 14834.800000000001 18362.399999999998 16472.0 17158.7 17509.899999999998 17226.6 15826.399999999998 True False 12830.276081342836 12827.49775414336 15936.084879092985 16074.632530700823 13792.854825281704 18212.862702434308 17098.850973824257 16816.45626776025 16774.019795317465 16138.909536090056 13879.853131815566 0.9243812567391743 0.9241810869554532 1.1481450652070735 1.1581269901087323 0.9937320441572653 1.3121797852951746 1.2319187250353583 1.2115730698341014 1.2085156547418976 1.1627579472794458 1.0 13.760704681822801 -5.758455419009183 24.88131451465085 1.1304639954690405 0.9242810724752907 0.46851954715643285 0.09235391538003138 59.42240631812772 495455.9846522329 0.015252138222665001 0.05436470658333526 1.7439923717539882e-06 5.758455419009183 -0.20618292299374985 ERS(ph)PAPPPPAVFPAARPEPGDGLS(ph)SPAGGSYETGDRDDGR ddPTM_A549_MK2206_60min_R1 1 ERSPAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR 40 3 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 2 ERS(1)PAPPPPAVFPAARPEPGDGLS(0.326)S(0.313)PAGGS(0.301)Y(0.008)ET(0.052)GDRDDGR 51.148 0.0013714999999999999 4029700.0 708.19 829.24 809.96 420.07 576.85 727.3 781.44 591.45 933.99 943.3 747.35 True False 827.7151584168456 871.4447740295865 924.824507277242 522.9871688576586 491.9961291485745 804.262403257333 923.417532876801 675.2898487396593 722.44275627555 730.2078748496974 561.7623691893058 1.473425782526771 1.5512694011298613 1.6462913110607262 0.9309757960690662 0.8758082707793104 1.431677248901498 1.643786738882865 1.2020916419057903 1.2860291039396718 1.2998518855997419 1.0 9.133816175573516 -14.646550600101953 0.1128100268470646 2.1688000251424888e-20 1.5293755932637387 0.05600040614570512 0.25612429458347 100.7119267903066 0.8675301250000396 23.848229162418296 1.25317059742891 2.2565730645047178e-15 14.646550600101953 1.5293755932637387 ERS(ph)PAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR ddPTM_A549_MK2206_60min_R1 1 ERSPAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR 40 3 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 ERS(1)PAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR 58.423 0.00020103 4975900.0 418.56 623.67 357.54 635.07 747.1 404.27 478.82 501.93 865.84 785.68 741.71 True False 489.2026951904924 655.4121390900495 408.2445482886873 790.6621785093758 637.2025796773854 447.0495830672928 565.8153960535291 573.0801145961569 669.7286224623624 608.194342321542 557.5229368453874 0.8774575230187496 1.17557878927555 0.7322470903146033 1.4181697760869751 1.1429172462084636 0.8018496702518068 1.0148737543518165 1.0279041035312306 1.2012575235951088 1.0908866741211882 1.0 9.12288734941286 -8.615840599050614 22.849872338866795 1.0960675717246824 1.0285886947651797 0.03048842316156608 0.18316171290650288 31.46270517600519 7710.115185217699 0.030794756873335792 0.034917971409898024 2.421917810409626e-09 8.615840599050614 -0.06747887695950272 ERS(ph)PAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR ddPTM_A549_PD325901_60min_R1 2 ERSPAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR 40 3 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 ERS(1)PAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR;ERS(1)PAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR 127.66 3.5464999999999995e-30 56322000.0 3227.4 3394.5 3278.5 3803.7 3731.4 2680.0 3317.0 3100.8 3695.8 4139.3 3660.1000000000004 True False 3555.043272113692 3680.566427998786 3500.99872522206 4038.6459101705295 3469.3193366311734 2658.1749685511695 3443.2302501320446 3038.952111469458 3540.4783784907004 3877.9438915826436 3209.930903285532 1.1075139556664348 1.146618584291498 1.0906772858065588 1.2581722260864756 1.0808081049595628 0.8281097159538195 1.0726804887319283 0.9467344323078517 1.1029765079574876 1.2081082142962534 1.0 11.648326527006486 -6.996027984718704 24.992447085662796 1.0264896756070834 1.14907640993232 0.2621103683530498 0.09743630263724189 108.01735080157098 679649.1162452387 0.011945113807645036 0.022506220480878875 1.0091878547457717e-07 6.996027984718704 0.1225867343252367 ERS(ph)PDSFSMR ddPTM_A549_MK2206_60min_R1 3 ERSPDSFSMR 10 1 Q92834-2;Q92834;H7C4H4;A0A2R8Y838;A0A2R8Y414;Q92834-3;Q92834-6;A0A2R8YDN2;Q92834-5 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 ERS(0.996)PDS(0.002)FS(0.003)MR;ERS(1)PDSFSMR;ERS(1)PDSFSMR 113.52 2.9381999999999998e-05 24998800.0 3251.5000000000005 3131.07 2630.22 2661.12 3511.6 2380.06 2367.26 2159.42 3310.25 4291.799999999999 4583.4 True False 3800.273708457297 3290.4280891187327 3003.2247463217295 3313.0945194622154 2995.0482917883905 2631.916369444036 2797.360499690236 2465.524397946396 2560.4836603830236 3322.279399215449 3445.215284595256 1.103058414215689 0.9550718365355483 0.8717088768734371 0.9616509407340093 0.8693355986141948 0.7639337899179306 0.8119552099394769 0.7156372517475482 0.7431999015654632 0.9643169221007768 1.0 11.750378421528861 -4.373479802438919 0.8003080030116042 0.8529680891325233 1.8948009869582787 0.42542956012730715 0.08762633314640056 8.081960859690424 1.3237972560927538 0.01741394266371776 10.513096157338094 4.2317518969956e-05 4.373479802438919 1.0418328978257554 ERS(ph)PDSFSMR ddPTM_A549_PD325901_60min_R1 3 ERSPDSFSMR 10 1 Q92834-2;Q92834;H7C4H4;A0A2R8Y838;A0A2R8Y414;Q92834-3;Q92834-6;A0A2R8YDN2;Q92834-5 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 ERS(0.971)PDS(0.014)FS(0.014)MR;ERS(1)PDSFSMR;ERS(0.999)PDS(0.001)FSMR 107.2 7.6036e-05 19011000.0 3553.98 3018.94 3563.99 3536.22 4071.51 3828.38 3521.41 3270.32 3976.75 3640.45 4737.23 True False 3914.7774332982044 3273.356668770852 3805.8637934128924 3754.6442780616812 3785.5411835469777 3797.2029425753435 3655.419184539492 3205.0909020835925 3809.621027020642 3410.591365716915 4154.580741775176 0.9422797814312046 0.7878909743783694 0.9160644671420484 0.9037360233026525 0.9111728520479989 0.9139798161565802 0.8798527244358233 0.7714595289617879 0.9169688264122798 0.8209231153995173 1.0 12.020487179881414 -9.815207563957555 1.034138021695104 0.98709456858347 0.8806118477962751 0.0 0.07217029862577197 0.31867846029293134 0.6980282408405679 0.016574719732438147 0.010085568191888434 1.530355878263574e-10 9.815207563957555 -0.1064827207871949 ERS(ph)PEVLSGGEDGAVR ddPTM_A549_MK2206_60min_R1 2 ERSPEVLSGGEDGAVR 16 1 Q86W42-3;Q86W42-2;Q86W42 Q86W42-3 THOC6 THO complex subunit 6 homolog 1 ERS(1)PEVLSGGEDGAVR;ERS(1)PEVLSGGEDGAVR 96.71799999999999 1.2880000000000002e-06 14306700.0 1108.87 1191.22 762.5999999999999 869.3800000000001 1327.33 1133.6399999999999 811.3 1010.69 1716.54 1386.7600000000002 1033.65 True False 1296.0201467313684 1251.848009888 870.7481471302598 1082.378139027951 1132.0815153034189 1253.6010323506698 958.702708362701 1153.9584026083119 1327.7464307511143 1073.489952853352 776.9661777112813 1.668052206016317 1.6112001343167652 1.1207027694503167 1.393082697906266 1.4570537917599002 1.6134563746949933 1.2339053305856418 1.4852105995238316 1.7088857518383531 1.3816430929021188 1.0 9.601707987493619 -10.980026252868969 1.2461772090082488 0.9995339892988878 1.4887268080069027 0.1451541374237123 0.20240035914619323 0.31363865002958996 0.865103980433844 0.1302094328447367 0.02983455739096513 1.0470652516037973e-11 10.980026252868969 0.4891928187080149 ERS(ph)PEVLSGGEDGAVR ddPTM_A549_PD325901_60min_R1 2 ERSPEVLSGGEDGAVR 16 1 Q86W42-3;Q86W42-2;Q86W42 Q86W42-3 THOC6 THO complex subunit 6 homolog 1 ERS(1)PEVLSGGEDGAVR;ERS(1)PEVLSGGEDGAVR 112.32 8.7484e-08 18906300.0 744.95 1078.87 931.73 905.0699999999999 1102.02 946.03 913.72 955.1099999999999 967.44 1271.6399999999999 1289.65 True False 820.5767755967947 1169.7901611945936 994.9628007476435 960.9741183368925 1024.6179169626107 938.3258453352472 948.4921146067691 936.0595817807002 926.7818611632237 1191.3484333805602 1131.0312257649216 0.7255120432610823 1.0342686696412462 0.8796952533956307 0.8496441976542083 0.9059147914060967 0.8296197522757633 0.8386082479423144 0.8276160378752044 0.8194131515126267 1.053329392011123 1.0 10.143423044789404 -10.845693230674046 1.0841502630584583 1.0002578405105869 0.8590529963094217 0.4316682539444232 0.07320847559689628 0.4417966478186269 0.9191266874418391 0.04720244083649615 0.011466386380005853 1.4266149450488817e-11 10.845693230674046 -0.1412048442011652 ERS(ph)PFGNPENVR ddPTM_A549_MK2206_60min_R1 2 ERSPFGNPENVR 12 1 Q96HP0;K7ESB7 Q96HP0;K7ESB7 DOCK6 Dedicator of cytokinesis protein 6 1 ERS(1)PFGNPENVR;ERS(1)PFGNPENVR 97.065 7.1042e-05 22808300.0 2724.4 2776.9 2216.9 1882.56 3191.6 2774.3 2393.6 2588.12 3702.7 3652.6 4092.8 True False 3184.212114815029 2918.2323489011155 2531.2897552754694 2343.78728451133 2722.119867886956 3067.874584568706 2828.4861367397507 2954.9939357850826 2864.044361996895 2827.475123159127 3076.4448044664396 1.035029820847795 0.9485729581965429 0.8227970648459209 0.7618492882136473 0.8848264932089572 0.9972142455196039 0.9194009047824626 0.960522331327046 0.9309591245839426 0.9190722742869127 1.0 11.58704839355502 -7.243152081912306 22.097162440074506 0.9639291608478614 0.8829136362466451 0.1623161083688096 0.06956178280568895 219.67484188224125 265438.8146932165 0.010698767496415799 0.018494395723076464 5.712785504357045e-08 7.243152081912306 -0.0810155246012163 ERS(ph)PFGNPENVR ddPTM_A549_PD325901_60min_R1 2 ERSPFGNPENVR 12 1 Q96HP0;K7ESB7 Q96HP0;K7ESB7 DOCK6 Dedicator of cytokinesis protein 6 1 ERS(1)PFGNPENVR;ERS(1)PFGNPENVR 96.956 6.5268e-09 15365000.0 1869.0 2027.6 1874.5 2168.4 2440.9 2108.3 2066.7 2472.4 2484.2 1963.1 2470.6 True False 2058.7395041149207 2198.4729678628196 2001.7148422842015 2302.3371432062922 2269.4596046478605 2091.130703804636 2145.349399441634 2423.086042439721 2379.7977130382064 1839.149530975259 2166.7318624237687 0.9501588728251568 1.0146493001693087 0.9238405900603804 1.0625851694592388 1.0474113774785117 0.96510820746663 0.9901314678789024 1.1183137537513235 1.0983351259606697 0.8488127039946389 1.0 11.08130491262681 ERS(ph)PGPVDTR ddPTM_A549_MK2206_60min_R1 1 ERSPGPVDTR 10 1 Q8N350-4 Q8N350-4 DOS Protein Dos 1 ERS(0.977)PGPVDT(0.023)R 41.092 0.025766000000000004 2030900.0 392.7 458.91 308.46 186.46 449.28 404.74 280.36 273.68 514.58 670.33 491.31 True False 458.9781594067911 482.2665588369084 352.20426627825844 232.1427083705075 383.1915071576171 447.56931815533176 331.2977829613792 312.47497810984845 398.0284516154057 518.9019874355963 369.304167533817 1.2428187920862352 1.305879004987799 0.9536969718761901 0.6285948786355093 1.037604069611612 1.2119259881202074 0.8970864996562553 0.8461182016886806 1.077779474500402 1.4050802375201485 1.0 8.528665732974751 -5.760123324581796 24.99992599642213 0.9957739938212294 1.2743489842774425 0.22835058588946655 0.1891274689083766 27.540915588913332 523108.8674933908 0.020328835079176658 0.07101668213197278 1.7373074235981527e-06 5.760123324581796 0.27857499045621303 ERS(ph)PGPVDTR ddPTM_A549_PD325901_60min_R1 1 ERSPGPVDTR 10 1 Q8N350-4 Q8N350-4 DOS Protein Dos 1 ERS(0.992)PGPVDT(0.008)R 45.992 0.011179000000000001 2596900.0 417.6 498.83 467.64 394.06 580.97 448.36 501.1 498.59 422.85 611.24 497.56 True False 459.99444457912807 540.8681547440375 499.3768625477641 418.40019122480675 540.1646714376944 444.7087048132844 520.1696347124414 488.6452313137114 405.07908500048507 572.6462020851288 436.3632742927106 1.054154810174437 1.2394905497505857 1.144406259571662 0.9588345671458723 1.2378783991692075 1.019124960811839 1.1920564019865563 1.1198129175874005 0.9283070067183512 1.3123153019999574 1.0 8.769385874787833 -8.752060571786604 24.78261662211185 0.966144976143751 1.1229689487296297 0.0 0.13378914569113537 116.45899381459682 307731.6765215761 0.013397788326081352 0.015091181917906685 1.769862095439996e-09 8.752060571786604 0.15682397258587866 ERS(ph)PGRLFEDSSR ddPTM_A549_MK2206_60min_R1 2 ERSPGRLFEDSSR 13 2 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 ERS(1)PGRLFEDSSR;ERS(1)PGRLFEDSSR 79.013 0.00016322 51075000.0 816.5699999999999 755.9 688.73 721.26 1375.88 807.36 529.19 506.92999999999995 1499.22 1049.58 1057.6200000000001 True False 954.3870527802474 794.3720812900542 786.4022703553945 897.9687323785917 1173.4898746172144 892.7942993178062 625.3369730536886 578.7888799080149 1159.6490637623851 812.4791490350316 794.9837651729363 1.2005113746852873 0.9992305705981945 0.9892054464588029 1.129543484681417 1.4761180366519058 1.1230346309318566 0.7866034508486551 0.7280511945827075 1.4587078561410893 1.0220072215667064 1.0 9.634781588355807 -8.784137099564994 24.999357466233807 1.216611956020115 1.060020799679111 0.026714088270347602 0.2213085654253576 493.2701974393724 543287.4437375932 0.04439194270732759 0.04727500333654328 1.6438527042616055e-09 8.784137099564994 -0.15659115634100407 ERS(ph)PGRLFEDSSR ddPTM_A549_PD325901_60min_R1 4 ERSPGRLFEDSSR 13 2 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 ERS(1)PGRLFEDSSR;ERS(1)PGRLFEDSSR;ERS(1)PGRLFEDSSR;ERS(1)PGRLFEDSSR 115.73 3.6886e-06 270084000.0 8791.49 8961.99 9453.22 10539.67 11179.34 12549.52 10602.49 11655.099999999999 13431.29 11827.26 12381.23 True False 9683.995592847124 9717.248349406646 10094.772356029793 11190.681478572711 10394.141725029307 12447.320869900092 11005.973558855145 11422.629887250927 12866.819589869136 11080.48478514718 10858.41720108355 0.8918422835955104 0.8949046780443259 0.9296725451866452 1.0305996971138671 0.9572428036741936 1.1463292153351767 1.0135891221564843 1.0519608590938165 1.184962720771603 1.020451192835128 1.0 13.40652620068725 -6.445466199034802 0.8685022341567195 1.0844509514049163 0.8757519696642777 0.5353073665347482 0.06098433390325992 0.47364176967378413 0.5959725379026934 0.012251263284952331 0.06361849029502369 3.5853685196994435e-07 6.445466199034802 -0.2086989817406386 ERS(ph)PPLSPEEK ddPTM_A549_MK2206_60min_R1 2 ERSPPLSPEEK 11 1 H0YEF1;H0Y343;Q8N157 H0YEF1 AHI1 Jouberin 1 ERS(1)PPLSPEEK;ERS(1)PPLSPEEK 61.409 0.002176 11091900.0 1791.5 1780.73 1992.3600000000001 1775.73 1991.7 1661.74 1923.3899999999999 1723.92 2649.6000000000004 3204.7 3024.1000000000004 True False 2093.8614020302157 1871.3615508872053 2274.9066068927923 2210.7839297155483 1698.7235683890356 1837.5842238262626 2272.8450662365767 1968.290939283579 2049.4698305417583 2480.7560442391864 2273.132509085946 0.9211347748804062 0.8232522932152787 1.0007804638751834 0.9725715156854324 0.7473051226002275 0.8083929187943282 0.9998735476932293 0.8658936209904686 0.9016059654902718 1.0913380695244768 1.0 11.150466071162352 -10.456650781650428 0.612345862588005 1.008107314447983 0.8902356437877451 0.3100369913561746 0.08166247309622159 1.1903077552936074 0.7355452152579537 0.07348996689503497 0.016904503913562765 3.4942117384473735e-11 10.456650781650428 -0.11787167066023796 ERS(ph)PPLSPEEK ddPTM_A549_PD325901_60min_R1 1 ERSPPLSPEEK 11 1 H0YEF1;H0Y343;Q8N157 H0YEF1 AHI1 Jouberin 1 ERS(0.998)PPLS(0.002)PEEK 62.357 0.0020364999999999997 8839100.0 3303.0 2524.6 2454.3 2529.8 3117.0 2556.0 2371.1 2547.5 3047.3 3126.0 3396.5 True False 3638.3181284599164 2737.356902084471 2620.8635569048365 2686.060000407341 2898.072673066239 2535.1847834391006 2461.3335080157067 2496.68811402491 2919.2325782712037 2928.6238265135007 2978.7520321874563 1.2214236328319366 0.9189609851728021 0.8798528808657486 0.9017400479739912 0.9729150468889584 0.8510895690694265 0.8262968791693004 0.8381658114023876 0.9800186610791687 0.9831714069743684 1.0 11.540492315324638 -8.969943928901841 24.593287270447913 0.9911847687093813 0.918761679010806 0.06344532238720513 0.10273858511406167 276.95594215214095 226620.35623301603 0.017534878157640276 0.01845638667876255 1.0716576563917508e-09 8.969943928901841 -0.07242308969857536 ERS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 ERSPQR 6 1 A0A0C4DGG8;Q8IX12-2;Q8IX12;F5H1H2;F5H2E6;F5H3E1 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 ERS(1)PQR 71.692 0.013712 91440000.0 594.34 440.07 385.2 288.04 420.92 234.2 219.3 250.23 239.48 570.41 546.47 True False 654.6769592700168 477.15624332579904 411.3419883957717 305.8315766136968 391.35603129516886 232.29275284876258 227.64558150556462 245.2389663483625 229.41548841413308 534.3942152532205 479.25765435874564 1.3660229592910416 0.995615279142994 0.8582898669529938 0.6381360294034413 0.816587962103202 0.4846928384682222 0.47499623518826845 0.5117058937253619 0.47868925269664114 1.1150457596097207 1.0 8.90465766354028 -5.29117936232655 1.19105558415451 0.6898422951129447 1.656034042239002 0.4919554504177378 0.20600395395772425 1.0321811395460139 1.2361120701011241 0.0332297445290339 1.213888185448547 5.114705560992627e-06 5.29117936232655 0.9661917471260574 ERS(ph)PS(ph)PLR ddPTM_A549_MK2206_60min_R1 6 ERSPSPLR 8 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(1)PLR;ERS(1)PS(1)PLR;ERS(1)PS(1)PLR;ERS(1)PS(1)PLR;ERS(1)PS(1)PLR;ERS(1)PS(1)PLR 69.979 0.0019827 586475600.0 10906.99 10248.45 8784.87 8412.7 12280.8 10015.650000000001 9212.89 10350.630000000001 12044.289999999999 12590.519999999999 12315.0 True False 12747.823261696645 10770.052330330813 10030.696663100196 10473.811877660453 10474.310588277387 11075.499435149599 10886.752859420247 11817.863499974937 9316.27754577891 9746.3127875041 9256.8456232907 1.3771238908448973 1.1634689362467932 1.0835977039373377 1.131466625230068 1.1315205000203832 1.1964658249547853 1.1760758796742399 1.2766620489209182 1.006420321231098 1.0528762371257305 1.0 13.176304946947068 -8.782819020992601 24.474512035496367 1.0030317671046773 1.1830579763717792 0.49422542371972233 0.07672313314272697 99.13334889818576 113483.13413798093 0.012837709537591278 0.013673486534621724 1.648849356165525e-09 8.782819020992601 0.1800262092671019 ERS(ph)PS(ph)PLR ddPTM_A549_PD325901_60min_R1 4 ERSPSPLR 8 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(1)PLR;ERS(1)PS(1)PLR;ERS(1)PS(1)PLR;ERS(1)PS(1)PLR 73.9 0.0014915999999999998 950480000.0 10866.7 10546.0 10308.400000000001 9676.6 11640.3 10131.7 9336.5 9318.1 11201.5 11071.8 11370.5 True False 11969.879384358266 11434.748431190219 11007.9900134449 10274.30160484689 10822.725484854975 10049.190794354425 9691.805616628842 9132.243185591968 10730.739909265536 10372.724658474792 9972.000583538193 1.2003488451573276 1.1466854955932047 1.1038898284479568 1.0303149823123494 1.085311356952903 1.0077406945747334 0.9719018300729046 0.9157884728434033 1.0760869716533985 1.0401849229329283 1.0 13.283667251914649 -5.733128312554714 0.9422205253224518 1.021704176396844 1.2323576184485254 0.6758582386036727 0.043964464228110636 0.6045613646330936 0.6298370287561871 0.0077613453293820115 0.10914820636033563 1.8487223322042678e-06 5.733128312554714 0.21065344205168146 ERS(ph)PS(ph)PLRGNVVPS(ph)PLPTR ddPTM_A549_MK2206_60min_R1 4 ERSPSPLRGNVVPSPLPTR 19 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 ERS(1)PS(1)PLRGNVVPS(0.878)PLPT(0.122)R;ERS(1)PS(1)PLRGNVVPS(0.994)PLPT(0.006)R;ERS(1)PS(1)PLRGNVVPS(0.964)PLPT(0.036)R;ERS(1)PS(1)PLRGNVVPS(0.995)PLPT(0.005)R 103.33 5.876900000000001e-10 150591000.0 19751.42 21759.64 19074.329999999998 15579.58 31301.4 23779.17 23270.700000000004 23447.5 31659.899999999998 27852.710000000003 27112.2 True False 23084.976820143824 22867.112733063008 21779.356812550643 19396.577799393934 26697.005524713855 26295.46598606445 27498.6849691802 26771.254929957162 24488.983200471394 21560.763466452794 20379.492481346497 1.1327552362392574 1.1220648774248647 1.0686898524330501 0.9517694229700651 1.3099936393975378 1.2902905217160283 1.34933119626752 1.3136369786667206 1.2016483346131581 1.0579637096550625 1.0 14.314830503488821 -4.325346620492898 15.57375051480168 1.1419259322715964 1.1313270050435325 0.0 0.13332169146685927 0.0 0.0 0.019908383078998136 0.0 4.727737766328538e-05 4.325346620492898 -0.010598927228063992 ERS(ph)PS(ph)PLRGNVVPS(ph)PLPTR ddPTM_A549_PD325901_60min_R1 3 ERSPSPLRGNVVPSPLPTR 19 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 ERS(1)PS(1)PLRGNVVPS(0.914)PLPT(0.086)R;ERS(1)PS(1)PLRGNVVPS(0.986)PLPT(0.014)R;ERS(1)PS(1)PLRGNVVPS(0.901)PLPT(0.099)R 94.76700000000001 8.4792e-07 396528000.0 47098.8 53916.7 52537.9 50794.4 58932.3 48919.8 47803.92 54023.0 51395.6 54864.4 56576.3 True False 51880.23550369601 58460.449529675105 56103.43783005765 53931.85472554769 54793.098553397984 48521.41336810797 49623.12433490872 52945.46888477637 49235.621665013445 51400.252420782934 49617.77376671489 1.0455978083099497 1.1782158910340341 1.1307125163219947 1.0869462821753364 1.104303849080687 0.9779038776757374 1.0001078357166726 1.0670665945978777 0.9922980804520133 1.0359241964875052 1.0 15.598569385884758 -7.221594741195396 7.141312169590207 1.001336172468941 1.1133353466300475 0.6078605964645817 0.038165380013683754 0.10327139278910348 15.469749148235913 0.005198037963711015 0.008980510217739983 6.003510282461509e-08 7.221594741195396 0.11199917416110661 ERS(ph)PS(ph)PLRGNVVPS(ph)PLPTRR ddPTM_A549_MK2206_60min_R1 3 ERSPSPLRGNVVPSPLPTRR 20 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 ERS(1)PS(1)PLRGNVVPS(0.992)PLPT(0.008)RR;ERS(1)PS(1)PLRGNVVPS(0.974)PLPT(0.027)RR;ERS(1)PS(1)PLRGNVVPS(0.99)PLPT(0.01)RR 77.27600000000001 9.5091e-05 180421000.0 5500.18 5615.66 5575.35 4571.43 9640.83 5705.27 6205.26 5600.32 11233.09 9031.66 10862.310000000001 True False 6428.475917509657 5901.473107576804 6366.018465909642 5691.430555219292 8222.676678130278 6308.997884548276 7332.6754198135495 6394.182510260695 8688.813050558703 6991.401733239713 8164.898642495073 0.7873307678373347 0.7227858380093009 0.7796812605580956 0.6970607725119383 1.0070763934942797 0.7726976366506785 0.898073049143546 0.7831306658213123 1.0641666762814253 0.8562753855696663 1.0 12.995219261217295 -8.759937083811419 24.99988233015696 1.0303009387064421 0.8073627893395667 0.3339534782946988 0.09664369618296827 18.844975365690058 313600.73073607706 0.013724116864175465 0.015158189719464348 1.7380526019800493e-09 8.759937083811419 -0.2229381493668754 ERS(ph)PS(ph)PLRGNVVPS(ph)PLPTRR ddPTM_A549_PD325901_60min_R1 5 ERSPSPLRGNVVPSPLPTRR 20 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 ERS(1)PS(0.999)PLRGNVVPS(0.66)PLPT(0.342)RR;ERS(1)PS(1)PLRGNVVPS(0.983)PLPT(0.017)RR;ERS(1)PS(1)PLRGNVVPS(0.955)PLPT(0.045)RR;ERS(0.991)PS(0.966)PLRGNVVPS(0.863)PLPT(0.18)RR;ERS(1)PS(1)PLRGNVVPS(0.994)PLPT(0.006)RR 73.107 0.00019014 565181000.0 13114.239999999998 13706.81 14534.8 14540.550000000001 14607.19 17527.47 14501.95 17599.329999999998 18108.350000000002 19120.67 18668.12 True False 14445.58799060677 14861.93098275388 15521.218932852697 15438.686749514956 13581.231366469818 17384.732095534167 15053.829643021532 17248.297556742713 17347.319022983414 17913.387633046037 16372.059586962843 0.8823317502527213 0.9077618429014583 0.9480309334576528 0.9429898949188326 0.8295371327187584 1.0618537028400337 0.9194829497816497 1.0535203262073163 1.0595685247076168 1.0941438087185171 1.0 13.998948202216317 -7.546787826717899 1.4633591645867938 1.0278064484603915 0.9094717094246476 0.5156475222141954 0.0573601729037656 0.24331715486259564 1.0445769403981326 0.008542536130386363 0.014826536990352966 2.839305824102595e-08 7.546787826717899 -0.11833473903574387 ERS(ph)PS(ph)PLRGNVVPSPLPTR ddPTM_A549_MK2206_60min_R1 4 ERSPSPLRGNVVPSPLPTR 19 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR 123.29 1.7686000000000002e-14 72131600.0 6929.25 6950.53 5911.92 5625.38 9447.300000000001 7546.37 6058.45 7361.93 9861.59 8270.08 8491.98 True False 8098.7379961026345 7304.282288886049 6750.3191528748 7003.598352532906 8057.614684762639 8344.92186452501 7159.191943152971 8405.50612246506 7627.955610723239 6401.863184179995 6383.186999275047 1.2687608865324527 1.1443002202059274 1.057515494006591 1.0971946072280696 1.2623184446386673 1.3073284341305935 1.121570141054313 1.3168196581769722 1.1950073860580246 1.0029258401652763 1.0 12.64006119768765 -10.512687376715219 0.8901728181943127 1.0031871225034688 1.193241397951804 0.4495868515851493 0.08256814926909645 0.44591828585127974 0.6494809530811927 0.05223190767642757 0.015936137328010063 3.0712319937750553e-11 10.512687376715219 0.1900542754483352 ERS(ph)PS(ph)PLRGNVVPSPLPTR ddPTM_A549_PD325901_60min_R1 4 ERSPSPLRGNVVPSPLPTR 19 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR 123.85 1.5104e-14 223916000.0 17164.89 19633.2 18922.15 17741.65 20989.1 15443.000000000002 16232.33 18152.4 20156.1 21902.6 22293.800000000003 True False 18907.45699667585 21287.758666721384 20206.320887131504 18837.5114262894 19514.898024464095 15317.237328110326 16850.060200821797 17790.336141717697 19309.009211725857 20519.666098078902 19551.803932042025 0.9670441184043278 1.0887874459417235 1.0334760392117497 0.9634666699689012 0.998112403965066 0.7834181122800655 0.8618161403105861 0.909907658830519 0.987581978565248 1.0495024484390783 1.0 14.25501410236328 -6.259408767991032 6.227734700632975 0.9620788231483846 1.036029997662669 0.17376952782640676 0.07583895027357122 0.2311813455141503 44.45946522684144 0.011259842227669873 0.02837288957303907 5.502895073914347e-07 6.259408767991032 0.07395117451428446 ERS(ph)PS(ph)PLRGNVVPSPLPTRR ddPTM_A549_MK2206_60min_R1 1 ERSPSPLRGNVVPSPLPTRR 20 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(0.997)PLRGNVVPS(0.003)PLPTRR 48.115 0.0056495 16097000.0 895.78 1345.0 1058.6 778.36 1800.2 1424.8 1210.3 918.31 1778.2 1666.3 1628.5 True False 1046.9657642816787 1413.4547550405127 1208.7253980489018 969.0582349419079 1535.3929647105194 1575.5713902943044 1430.1958436230454 1048.483254706427 1375.4405392019014 1289.8816727043895 1224.098505686473 0.8552953536157956 1.1546903688505437 0.9874412822447243 0.7916505333845345 1.2543050723270617 1.2871279418895507 1.1683666281587308 0.8565350336069881 1.1236355022184723 1.0537400925761489 1.0 10.25750394395665 -5.243944632243619 23.269332426342547 1.0636127486569116 0.8552949096369658 0.14759860298305427 0.1464689310281081 2100.9215064729788 2794266.429952659 0.019853300808875006 0.7465426189425675 5.702369665705839e-06 5.243944632243619 -0.20831783901994583 ERS(ph)PS(ph)PLRGNVVPSPLPTRR ddPTM_A549_PD325901_60min_R1 1 ERSPSPLRGNVVPSPLPTRR 20 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(0.999)PLRGNVVPS(0.001)PLPTRR 63.138000000000005 0.0006814 26209000.0 1005.7 1165.1 1531.3 1186.1 1330.5 1825.4 1305.5 1552.6 1648.4 1836.7 1953.3 True False 1107.7979236427902 1263.2870659188056 1635.223226454945 1259.3627031714548 1237.0502699758197 1810.5345476094406 1355.181516897012 1521.632175008862 1579.123480465412 1720.730448546817 1713.0564829888885 0.6466791577764781 0.7374462421196183 0.9545646875588466 0.7351553878563054 0.7221304622819279 1.0569030067534464 0.7910898037247043 0.8882556939126518 0.9218163534866087 1.0044796920791188 1.0 10.742357005485365 -2.499076781750995 0.1378068171177709 1.039374988870087 8.72581323092485e-15 0.47626830318309454 0.09577913132817749 38.333300721932154 0.38372809552829895 0.22019904936312462 7.6994973318812585 0.0031690071440938364 2.499076781750995 -1.0393749888700783 ERS(ph)PS(ph)PPTIQSK ddPTM_A549_MK2206_60min_R1 2 ERSPSPPTIQSK 12 1 Q14687-2;Q14687-3;Q14687;H0Y613;H7C3B5 Q14687-2 GSE1 Genetic suppressor element 1 2 ERS(0.996)PS(0.901)PPT(0.102)IQSK;ERS(1)PS(0.997)PPT(0.003)IQSK 81.656 0.00020831 23703000.0 2979.5 3065.6000000000004 3080.3 3094.2 3863.8 2939.3999999999996 2592.2 2662.3 4305.2 4871.1 4064.6 True False 3482.3667582188277 3221.6259457637143 3517.1328581239695 3852.2791389039144 3295.440138344909 3250.445356984191 3063.169186019711 3039.689177951805 3330.0790739916906 3770.7151268741272 3055.2476427468446 1.1397985254930034 1.0544565686555234 1.1511776685185047 1.2608729600198603 1.0786163753921163 1.0638893265168687 1.0025927663479823 0.9949076256283266 1.089953896829704 1.2341765931235729 1.0 11.577073606926398 -6.990379254127719 24.984591844624966 1.0388669033388123 1.1477525582114556 0.17896047025386586 0.07846024457449076 149.42866046357506 388055.3325204819 0.00830074219769506 0.01567383052693434 1.022399776490978e-07 6.990379254127719 0.10888565487264334 ERS(ph)PS(ph)PPTIQSK ddPTM_A549_PD325901_60min_R1 2 ERSPSPPTIQSK 12 1 Q14687-2;Q14687-3;Q14687;H0Y613;H7C3B5 Q14687-2 GSE1 Genetic suppressor element 1 2 ERS(0.998)PS(0.983)PPT(0.019)IQSK;ERS(1)PS(0.999)PPT(0.001)IQSK 83.54 0.00016197 37506000.0 5784.2 5763.8 5076.9 6239.0 6716.6 6272.2 5699.6 6800.9 6301.1 6807.1 6405.5 True False 6371.407725897016 6249.535654057857 5421.448963879788 6624.368860202941 6244.849187012099 6221.121282741278 5916.501396940792 6665.250714297158 6036.286679665502 6377.298544293048 5617.664107810029 1.134173849418851 1.112479410324544 0.9650717557752427 1.1792034434727643 1.111645172649272 1.107421370048146 1.0531960052070932 1.186480819497682 1.0745189751152044 1.1352224735948393 1.0 12.45575464987332 -9.933860449701179 0.8752683109507003 1.0077096517966055 1.102413902738201 0.0 0.06903347821192035 0.46573142395644246 0.7288048577336221 0.02182961396199932 0.01115140269449243 1.1645001539854985e-10 9.933860449701179 0.0947042509415954 ERS(ph)PS(ph)PSFR ddPTM_A549_MK2206_60min_R1 2 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 ERS(0.999)PS(0.882)PS(0.119)FR;ERS(0.999)PS(0.891)PS(0.11)FR 48.115 0.0096036 27003000.0 696.3 646.1199999999999 731.31 537.6 935.8000000000001 721.4200000000001 726.44 805.47 1003.6199999999999 953.3100000000001 1171.92 True False 813.818417099436 679.0047481983463 835.0207546260558 669.3120241337812 798.1450596467641 797.7601855601607 858.424744808333 919.6478391484202 776.3016724518117 737.9566088974511 880.8999206534174 0.9238488936357004 0.7708080478593833 0.9479178452038795 0.7598048409827435 0.9060564553743302 0.9056195452582322 0.9744861188903126 1.0439867430868435 0.8812597824687975 0.837730361412751 1.0 9.78283431314464 -7.280129643056507 2.280463114082644 0.9529290363021173 0.852121635139119 0.23115791265594032 0.07456445966115822 0.290339871231584 2.9544192862171914 0.010540858299768736 0.018835549725551293 5.2465082116737723e-08 7.280129643056507 -0.10080740116299836 ERS(ph)PS(ph)PSFR ddPTM_A549_PD325901_60min_R1 2 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 ERS(1)PS(0.977)PS(0.023)FR;ERS(0.999)PS(0.857)PS(0.144)FR 76.165 0.00058629 33136000.0 1973.18 1640.6999999999998 1707.1599999999999 1314.0900000000001 1977.17 1472.7199999999998 1717.17 1467.2 1767.56 1963.48 2236.08 True False 2173.4957810216565 1778.967547037151 1823.018143587035 1395.2583547850745 1838.3004000662104 1460.7266565987604 1782.5178440214795 1437.9355450038665 1693.2756000554743 1839.505537710406 1961.0563356790014 1.1083290885007133 0.9071475993172815 0.929610287282149 0.7114830560448823 0.9374031569723938 0.7448672585395129 0.9089579996202892 0.7332454039399087 0.8634507684702439 0.9380176919157658 1.0 10.937415265392202 -10.503399428956126 0.9839892407504214 0.9946105904711435 0.8665663130901758 0.09640795443074157 0.1090419645312286 0.6862102295881426 1.2565797660193263 0.05547674689390144 0.01872457610177602 3.137621635702914e-11 10.503399428956126 -0.12804427738096769 ERS(ph)PSPLR ddPTM_A549_MK2206_60min_R1 4 ERSPSPLR 8 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 ERS(0.5)PS(0.5)PLR;ERS(0.625)PS(0.375)PLR;ERS(0.946)PS(0.054)PLR;ERS(1)PSPLR 92.445 0.00072079 359620000.0 6264.6 7124.200000000001 6111.9 5973.5 9273.1 7080.2 6619.6 7267.900000000001 10489.9 11132.8 11230.8 True False 7321.911325234991 7486.791350081498 6978.659323951527 7437.007768160602 7909.039274001295 7829.422064543614 7822.29563450972 8298.147082010264 8113.9543989281365 8617.8927479346 8441.882405688448 0.8673315942308342 0.8868627860815291 0.826670994522389 0.8809655726961175 0.9368810051975962 0.9274497900216976 0.9266056145533101 0.9829735458549708 0.9611546345943718 1.0208496557743507 1.0 13.043349017545497 -7.318069036241401 0.4484521788017764 0.990588670669104 0.8445448267420652 0.8335650803933428 0.023290570306646496 0.3593139858467341 0.1328393126828898 0.006506360591636432 0.021147528684810398 4.807629194264234e-08 7.318069036241401 -0.14604384392703884 ERS(ph)PSPLR ddPTM_A549_PD325901_60min_R1 7 ERSPSPLR 8 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 ERS(0.943)PS(0.057)PLR;ERS(0.986)PS(0.014)PLR;ERS(0.94)PS(0.06)PLR;ERS(0.958)PS(0.042)PLR;ERS(0.983)PS(0.017)PLR;ERS(0.819)PS(0.181)PLR;ERS(0.993)PS(0.007)PLR 94.465 0.00070667 362791300.0 19161.950000000004 21896.42 20655.95 20960.559999999998 24020.139999999996 21542.81 22407.530000000002 22820.28 24852.649999999998 25642.52 26313.91 True False 21107.25705771799 23741.708158892674 22057.78698131787 22255.24618631437 22333.048231384444 21367.372497855893 23260.26081602089 22365.11161323665 23808.179547918433 24023.446911020146 23077.465887618964 0.9146262921806337 1.0287831547236768 0.9558149533719752 0.9643713176607612 0.9677426603137609 0.9258976961296026 1.007920927249642 0.96913204084663 1.031663513830238 1.0409915468192155 1.0 14.494197191397406 -8.378701900337866 1.74257940952721 1.0143445866010923 0.9649329685063703 0.3606792872763228 0.03250642398753976 0.2940575349038827 1.7375710861534295 0.005355821548030247 0.006630208507021531 4.181172637945204e-09 8.378701900337866 -0.04941161809472194 ERS(ph)PSPLRGNVVPS(ph)PLPT(ph)RR ddPTM_A549_PD325901_60min_R1 1 ERSPSPLRGNVVPSPLPTRR 20 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 ERS(0.586)PS(0.487)PLRGNVVPS(0.944)PLPT(0.983)RR 63.625 0.00062347 49317000.0 4928.5 4749.7 4501.2 5034.7 5638.6 6434.4 4629.5 5293.8 5840.7 6031.1 7299.8 True False 5428.83769183006 5149.973888073599 4806.678499914455 5345.6819843666835 5242.564188113987 6382.000379718521 4805.678155859603 5188.211006094242 5595.235690581373 5650.295316726034 6401.97087724481 0.8479947497303278 0.8044356943857219 0.7508123032860601 0.8350056704205568 0.818898474959981 0.9968805703885232 0.7506560476463465 0.810408404782852 0.8739864329075754 0.8825868509976303 1.0 12.644300398698025 -10.460602900228691 0.3540226213976068 1.052869436718856 0.8130162191723721 0.19097459592031607 0.07186240127095282 1.4726118439457836 0.2678158065442039 0.13601707575635547 0.02486550941060993 3.4625583423152466e-11 10.460602900228691 -0.23985321754648392 ERS(ph)PSPLRGNVVPS(ph)PLPTRR ddPTM_A549_PD325901_60min_R1 1 ERSPSPLRGNVVPSPLPTRR 20 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(0.742)PS(0.259)PLRGNVVPS(0.973)PLPT(0.025)RR 41.188 0.02885 8324700.0 605.83 815.81 1129.2 923.18 1066.5 962.69 1000.8 1083.4 1087.8 1034.1 960.74 True False 667.3334156115262 884.561171785444 1205.8343024312187 980.2027319060985 991.5927192252633 954.8501718188527 1038.8859916587733 1061.7907370891417 1042.0835489263982 968.8067495193901 842.575070632645 0.7920165678655327 1.0498306947549183 1.4311298120009908 1.1633417200085403 1.176859788268752 1.1332523416600806 1.2329892348686853 1.2601734540898526 1.236784216917257 1.1498165365751498 1.0 9.718661421119103 -2.055203292659046 21.36003903726234 1.1386540518672321 0.003553471460795654 0.0 0.1561854114943376 0.0 0.0 0.021346408571832592 0.0 0.008806365517343366 2.055203292659046 -1.1351005804064365 ERS(ph)PSPPTIQSK ddPTM_A549_MK2206_60min_R1 1 ERSPSPPTIQSK 12 1 Q14687-2;Q14687-3;Q14687;H0Y613;H7C3B5 Q14687-2 GSE1 Genetic suppressor element 1 1 ERS(0.96)PS(0.038)PPT(0.002)IQS(0.001)K 40.187 0.030354000000000003 4554700.0 2024.7 2161.6 1704.1 1882.3 2593.1 2082.2 2341.2 1914.2 3084.4 2468.6 3153.9 True False 2366.4198608376096 2271.616207059904 1945.7670043596577 2343.463584499658 2211.6584250587994 2302.537021947501 2766.565735016336 2185.543711991641 2385.788324774683 1910.9415454828397 2370.6995867881897 0.9981947413436815 0.9582050040078999 0.8207564615961197 0.9885114071642325 0.9329138273715826 0.9712479112830004 1.1669828393417252 0.9218982127350025 1.0063646773596209 0.8060665113928553 1.0 11.211097141868306 -7.525550944468114 24.997051618929806 1.0095942616575526 0.9383689347268819 0.0 0.09260723658044073 101.74576088783417 951774.0669789293 0.01001305420324904 0.014899544534239442 2.981597774146722e-08 7.525550944468114 -0.07122532693067074 ERS(ph)PSPPTIQSK ddPTM_A549_PD325901_60min_R1 1 ERSPSPPTIQSK 12 1 Q14687-2;Q14687-3;Q14687;H0Y613;H7C3B5 Q14687-2 GSE1 Genetic suppressor element 1 1 ERS(0.992)PS(0.008)PPTIQSK 67.415 0.0013300999999999999 7549100.0 2550.5 2484.4 2695.1 2310.8 3129.5 2538.2 2076.0 2946.6 3040.5 2446.3 3446.6 True False 2809.424882421136 2693.769107002558 2878.0056929528655 2453.5328677924285 2909.6947161888997 2517.529740737529 2155.0033160307903 2887.8277514370175 2912.7183586235683 2291.840200511831 3022.6900497975244 0.9294452412047096 0.8911827089856602 0.952133909047555 0.8117050797043445 0.9626176247822056 0.8328772382421964 0.7129422072816046 0.955383351869127 0.9636179398607798 0.7582121099930013 1.0 11.56161733556102 -8.502258243766958 24.540325424821123 0.9815922837234536 0.8713412181117175 0.0 0.09501933776323908 482.6606673647257 574412.308752855 0.010941019326899573 0.013147239667552907 3.145877130420137e-09 8.502258243766958 -0.11025106561173614 ERS(ph)PSPSFR ddPTM_A549_MK2206_60min_R1 2 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 ERS(0.999)PS(0.001)PSFR;ERS(0.99)PS(0.01)PS(0.001)FR 66.84 0.0014460999999999999 51695000.0 1681.62 2078.69 1112.25 1097.8200000000002 1914.15 1041.81 1230.46 1529.6999999999998 2288.92 2190.88 2250.55 True False 1965.436344338293 2184.486442197147 1269.983774777906 1366.7859492830128 1632.5810706591722 1152.0536427024906 1454.0186546677785 1746.539659509776 1770.4832746541526 1695.9586863677573 1691.6763229798523 1.1618276603151945 1.2913146637586201 0.7507250397291465 0.8079476733914724 0.965067045321894 0.6810130443116756 0.8595135103070752 1.0324313438597301 1.0465851242367001 1.0025314318878458 1.0 10.7242378413572 -5.7409260672447 24.999125425464115 0.9579099478478732 1.2265713084730656 0.4480795071759939 0.12698683721961954 203.75248407531987 248304.78065485499 0.019465040982296337 0.07521008016952632 1.8158247560417997e-06 5.7409260672447 0.2686613606251924 ERS(ph)PSPSFR ddPTM_A549_PD325901_60min_R1 2 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 ERS(0.989)PS(0.011)PSFR;ERS(0.994)PS(0.006)PSFR 99.539 0.00022397 64577000.0 4742.8 3960.5 3684.0 3958.5 4764.1 4126.7 4165.3 4223.4 3874.7999999999997 3997.0 4794.9 True False 5224.285564535175 4294.265234375958 3934.0183936916505 4203.007554594222 4429.486051252764 4093.093523403023 4323.812770839618 4139.160973806793 3711.9556309799686 3744.628737867714 4205.157697375426 1.2423518784553118 1.021190058355278 0.9355222031618452 0.9994886891441559 1.0533460026998152 0.9733507796765039 1.0282165573810105 0.9843057672700778 0.8827149653143137 0.8904847350207239 1.0 12.037944188580207 -5.277743798144466 2.884045843999268 0.964216790554039 1.2856956048516075 0.6997847249685308 0.05056369792978445 0.17669766305936713 2.1035236954513876 0.008003429387628496 0.12948063021361886 5.275409800879007e-06 5.277743798144466 0.3214788142975685 ERS(ph)PTFLER ddPTM_A549_MK2206_60min_R1 2 ERSPTFLER 9 1 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 ERS(0.994)PT(0.006)FLER;ERS(0.779)PT(0.221)FLER 123.75 2.685e-05 75082000.0 3423.3 2793.3 2376.49 2102.73 3307.6 2983.9 2865.3999999999996 2586.2 3443.9 3862.1 3257.7 True False 4001.0693483505656 2935.467038851052 2713.5120170123146 2617.8989443951364 2821.056421551225 3299.654317447485 3386.0060896616333 2952.801769905328 2663.862148778218 2989.6489276550583 2448.723182053928 1.6339410586191976 1.1987745533526803 1.1081334292495602 1.0690873364458076 1.1520519927389232 1.3474999304248907 1.382763929576366 1.2058536430518827 1.0878576101623036 1.220901141282705 1.0 11.257813977122415 -2.0000000002453002 0.029476190533086397 2.753580184866436e-07 2.942915445747207 0.08390313460447207 0.163375685917602 962.9920950798328 2.1177348695099547 67.27570857858261 164.37083606311361 0.009999999994351754 2.0000000002453002 2.9429151703891883 ERS(ph)PTFLER ddPTM_A549_PD325901_60min_R1 2 ERSPTFLER 9 1 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 ERS(0.988)PT(0.012)FLER;ERS(0.962)PT(0.038)FLER 106.79 0.00014293 97189000.0 4086.1000000000004 4039.3 3918.2 3778.7 4615.8 4393.3 3768.3 4397.1 4624.1 4784.4 4902.299999999999 True False 4500.917863972167 4379.705986924583 4184.112614050658 4012.101716949646 4291.602131645542 4357.522421393975 3911.70471859288 4309.396391041783 4429.76515774091 4482.312167489187 4299.348178240119 1.0468837780462241 1.0186906957410828 0.9731969686073131 0.9331883696360564 0.9981983207050359 1.013530944864686 0.9098366906850714 1.002337147954781 1.0303341283594705 1.0425562158875818 1.0 12.069902234871668 -8.514834038329788 24.78263351054054 1.0144303037587523 0.9831984459533715 0.1603507421711603 0.03777420320625146 556.0303712817705 1712920.2435729555 0.006272721867069454 0.007285071765626122 3.0560887465068874e-09 8.514834038329788 -0.031231857805380847 ERS(ph)PVGK ddPTM_A549_MK2206_60min_R1 2 ERSPVGK 7 1 Q5JTV8;J3KN66;Q5JTV8-3;Q5JTV8-2 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 ERS(1)PVGK;ERS(1)PVGK 53.751000000000005 0.012306000000000001 52916000.0 7963.7 6133.9 4756.9 3511.2 7166.0 4870.4 4236.5 5277.799999999999 6551.1 7816.799999999999 8200.400000000001 True False 9307.77786622832 6446.0893099947925 5431.499948969228 4371.444157623755 6111.890892742797 5385.782495290136 5006.217211855761 6025.94431258462 5067.286309957016 6050.979450996623 6164.014360473653 1.510018848417007 1.0457615659252721 0.8811627668810075 0.7091878606992482 0.9915439087771933 0.8737459357372884 0.8121683239347733 0.9776006284517443 0.822075682115646 0.9816621274924571 1.0 12.589654507604985 -5.283607677750746 2.5629739316795463 0.8986974175408865 1.6221933215007476 0.8074894857556886 0.08680009738594116 0.1525717124139286 1.310255445417133 0.012669849344545698 0.23234661519204364 5.204659499411163e-06 5.283607677750746 0.7234959039598611 ERS(ph)PVGK ddPTM_A549_PD325901_60min_R1 2 ERSPVGK 7 1 Q5JTV8;J3KN66;Q5JTV8-3;Q5JTV8-2 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 ERS(1)PVGK;ERS(1)PVGK 56.632 0.010354 50723000.0 13055.4 12550.0 10198.3 10344.7 11104.4 10020.5 7377.1 9317.2 10466.8 14083.7 15044.1 True False 14380.774597122489 13607.632544228836 10890.41796535981 10983.668624481703 10324.46525210034 9938.896370286184 7657.839577404016 9131.361136798 10026.91679527747 13194.45277846072 13193.771072407271 1.08996696381959 1.0313679439752514 0.8254211707625754 0.8324889498387875 0.7825257233462509 0.7533021693147189 0.5804132522368227 0.6920963753793505 0.7599735314679829 1.0000516687798893 1.0 13.68756935732146 -5.703439466898858 3.989588396919364 0.8282666236850299 1.0764283568455608 0.40661563340640505 0.11751979515949951 0.2038463833015019 6.417423302212752 0.019514279105651858 0.08285594807634278 1.9795229130925666e-06 5.703439466898858 0.24816173316053092 ERS(ph)PVGKR ddPTM_A549_MK2206_60min_R1 1 ERSPVGKR 8 2 Q5JTV8;J3KN66;Q5JTV8-3;Q5JTV8-2 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 ERS(1)PVGKR 56.548 0.0038108000000000005 27020000.0 1827.0 1552.7 1321.7 884.91 1858.5 1363.0 1463.7 1563.9 1946.5 2942.9 3040.8 True False 2135.352934138546 1631.7257978820842 1509.136934253953 1101.71298972512 1585.1171119400638 1507.2317553138255 1729.6353435603166 1785.5876142428835 1505.620857921774 2278.0968460671834 2285.6854381893927 0.9342286993918408 0.7138890464186782 0.66025574168658 0.48200551629617183 0.6934974889614361 0.6594222153805119 0.7567250132767388 0.7812044406501264 0.6587174388766516 0.9966799490448605 1.0 11.158411154535349 -10.852638897946044 0.6836356438376834 1.043396575610936 0.6929755979039636 0.5424091400468796 0.103705836014445 0.6444420726900114 0.423165164153037 0.13691262129578474 0.020859005719623364 1.4039805846015305e-11 10.852638897946044 -0.35042097770697245 ERS(ph)PVGKR ddPTM_A549_PD325901_60min_R1 3 ERSPVGKR 8 2 Q5JTV8;J3KN66;Q5JTV8-3;Q5JTV8-2 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 ERS(1)PVGKR;ERS(1)PVGKR;ERS(1)PVGKR 66.056 0.0017788 99141000.0 13165.2 12216.4 9938.1 10310.9 10301.300000000001 10002.3 8241.2 10024.099999999999 10055.0 14001.9 17648.0 True False 14501.721412291992 13245.918901459523 10612.559228650101 10947.78087524708 9577.772225555747 9920.844585052 8554.823375757684 9824.161461745673 9632.42331720439 13117.817644420804 15477.407879889364 0.9369606025008145 0.8558228228042413 0.6856806586094805 0.7073394304915958 0.6188227576531511 0.640988766467975 0.5527297233584849 0.634742040655964 0.6223537811987445 0.8475461618780168 1.0 13.917876252067657 -10.775158777752806 1.0146647048117041 1.0006576359464425 0.687348254671532 0.3499878347704386 0.11395238630551037 0.3573369538924311 0.6510074314651789 0.08017983754217768 0.020098482022289796 1.6781903607541938e-11 10.775158777752806 -0.3133093812749105 ERS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 ERSPVK 6 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 ERS(1)PVK;ERS(1)PVK 60.43600000000001 0.017797999999999998 205502000.0 8454.6 6871.3 5479.200000000001 4166.0 4987.6 4814.5 4149.0 4626.3 4530.4 9310.0 8966.0 True False 9881.529784875613 7221.019820304736 6256.23295011293 5186.670187018845 4253.930647033769 5323.967194393549 4902.819594474111 5282.092192449549 3504.271633562192 7206.864533924187 6739.494750988589 1.4662122532888882 1.0714482445802802 0.9282940607966538 0.7695933268970993 0.6311942963394662 0.7899653299103169 0.7274758384157709 0.7837519558383423 0.5199605850346816 1.0693478962747232 1.0 12.718424723611435 -5.278122361185528 1.1906268293945566 0.7570934925374709 1.7815404817831846 0.6493677984059496 0.1468676794198372 0.7567681436960497 0.8896498530775251 0.024881319884141447 0.949614398621921 5.27081336893196e-06 5.278122361185528 1.0244469892457135 ERS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 ERSPVK 6 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 ERS(1)PVK;ERS(1)PVK 60.891999999999996 0.017633000000000003 259140000.0 9228.4 9255.9 7852.4 7044.4 8084.1 5842.0 4440.4 6699.700000000001 7557.9 9604.2 10315.6 True False 10165.260374410982 10035.92717658387 8385.311084317133 7479.516589006825 7516.300704630983 5794.42468890893 4609.381851880112 6566.069227687025 7240.26774630523 8997.78917293697 9046.846595976129 1.1236247090707057 1.1093287666718772 0.9268766741382312 0.8267539976121157 0.830819957527974 0.640491095702472 0.5095014934740112 0.7257854057796771 0.80030844664986 0.9945774008082574 1.0 13.143199293086285 -5.870300539618303 2.5589368273975728 0.8342994929346615 1.128694598284565 0.4310755087900351 0.13802454450208007 0.2674228963001099 3.4398095187093407 0.023343968698747112 0.09936656244336076 1.348029698862151e-06 5.870300539618303 0.29439510534990354 ERS(ph)PVKAK ddPTM_A549_MK2206_60min_R1 2 ERSPVKAK 8 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 ERS(1)PVKAK;ERS(1)PVKAK 73.067 0.0011009000000000001 25261000.0 4987.200000000001 5031.7 4184.1 3016.3 8517.6 5756.5 5473.200000000001 4438.0 8499.6 9290.1 10204.2 True False 5828.917434666535 5287.792037871634 4777.468295840178 3755.293635406855 7264.672323196488 6365.649009144558 6467.609593751672 5067.100090804984 6574.4541710721405 7191.459957745334 7670.215518407062 0.759941806156325 0.6893928893108593 0.6228597207438514 0.4895942788562933 0.9471275358251217 0.8299178809080668 0.8432109343252007 0.6606203018213641 0.8571407355236236 0.9375825151832037 1.0 12.905051399935122 -9.242322972555582 0.21421125415273476 1.0956510996895688 0.6162908222653385 0.40711271161402585 0.11495958476314792 1.839100406378187 0.2831009279349996 0.31787075037309337 0.19885793920408457 5.723702170875724e-10 9.242322972555582 -0.47936027742423026 ERS(ph)PVKAK ddPTM_A549_PD325901_60min_R1 1 ERSPVKAK 8 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 ERS(1)PVKAK 70.977 0.0013029 18896000.0 4125.3 4304.8 3321.3 3830.9 4227.7 6453.3 3682.1 4859.4 4841.7 5406.2 6914.4 True False 4544.0974191146515 4667.580603696914 3546.703390599367 4067.5259923948465 3930.7609367732257 6400.746464384794 3822.2243304224303 4762.475454874446 4638.220186465291 5064.851609372138 6063.972633992919 0.7493598163094807 0.7697232302025532 0.5848811669626524 0.6707691867858117 0.6482154808447665 1.0555368321591716 0.6303168831924009 0.7853721878917053 0.7648814508932209 0.8352365544956468 1.0 12.566047527469939 -13.689831787440506 0.1960145529708578 1.6931466927801027 0.6837976861363344 0.19462284577066868 0.1262737049705451 20.136881015416723 0.3684232889460501 5.579515630943629 0.11092324314752378 2.0425289114001196e-14 13.689831787440506 -1.0093490066437683 ERS(ph)PYK ddPTM_A549_MK2206_60min_R1 4 ERSPYK 6 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 ERS(0.997)PY(0.003)K;ERS(0.989)PY(0.011)K;ERS(0.995)PY(0.005)K;ERS(1)PYK 65.24600000000001 0.016052 155109000.0 9945.1 9217.0 6783.0 5743.4 11454.7 8983.7 9470.900000000001 10197.6 11651.6 11886.0 11792.7 True False 11623.589745649288 9686.105931009968 7744.931395206601 7150.533257831023 9769.728803949334 9934.349171102576 11191.639936684705 11643.141028840218 9012.531203781838 9200.944344814483 8864.247128037372 1.3112889992523098 1.0927161428490728 0.8737269260814711 0.8066712439925192 1.102149868210234 1.1207211427669364 1.2625595580797666 1.3134946330651456 1.016728332773513 1.0379837353261674 1.0 13.11378238778024 -8.961773333410605 24.999492531632026 1.007379784891379 1.1012110171404426 0.06450281801130953 0.1523088625923383 361.38588612382665 236340.53098360103 0.02857661582529331 0.030360952966350222 1.0920101286973758e-09 8.961773333410605 0.09383123224906353 ERS(ph)PYK ddPTM_A549_PD325901_60min_R1 2 ERSPYK 6 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 ERS(0.999)PY(0.001)K;ERS(0.989)PY(0.011)K 55.37 0.022287 204119000.0 7934.0 8031.1 6722.7 5878.8 7870.099999999999 6189.599999999999 5358.1 5860.4 7479.099999999999 7613.0 8191.1 True False 8739.453839297903 8707.9089821479 7178.942848879162 6241.920124276497 7317.331326371062 6139.193949755341 5562.0054275648245 5743.509724605136 7164.7794362708455 7132.313880757296 7183.646627661025 1.2165762449458686 1.2121850410371826 0.9993452101661361 0.8689069003257539 1.018609587252702 0.8546068964634255 0.7742593303724069 0.7995256479473026 0.9973735913849756 0.992854221600201 1.0 12.81050066855798 -5.803403386532657 4.155575575713557 0.9521665536375937 1.219507970451638 0.6188673739919395 0.08638725127421 0.12048322532778001 4.376632916762799 0.013858635188615468 0.05047071040848866 1.5725215778523972e-06 5.803403386532657 0.26734141681404433 ERS(ph)PYKR ddPTM_A549_MK2206_60min_R1 5 ERSPYKR 7 2 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 ERS(1)PYKR;ERS(1)PYKR;ERS(1)PYKR;ERS(1)PYKR;ERS(1)PYKR 64.04 0.0053563000000000005 1704308000.0 14736.320000000002 15691.039999999999 13277.58 13172.44 18277.2 14288.849999999999 13957.69 14395.410000000002 20672.21 20449.199999999997 20805.9 True False 17223.450547566794 16489.64691414936 15160.540497474163 16399.6883913333 15588.648091660436 15800.886622829003 16493.62160173424 16436.003451594188 15989.987441735986 15829.71151741379 15639.220816372223 1.1012985077578858 1.0543777792872426 0.9693923166301902 1.0486256690080729 0.9967662887233587 1.0103372033910754 1.0546319279837504 1.0509477194917434 1.0224286509847444 1.012180319165399 1.0 13.932881015445446 ERS(ph)PYKR ddPTM_A549_PD325901_60min_R1 5 ERSPYKR 7 2 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 ERS(0.999)PY(0.001)KR;ERS(0.999)PY(0.001)KR;ERS(1)PYKR;ERS(1)PYKR;ERS(1)PYKR 73.985 0.0038598 4160544000.0 21343.23 21055.4 21635.899999999998 22293.21 24699.2 21779.9 22767.6 22341.8 22656.309999999998 23577.3 25932.600000000002 True False 23509.9789975445 22829.81245193272 23104.242281235933 23670.210950146622 22964.41339961427 21602.531715502824 23634.03347690877 21896.17527219697 21704.14408014034 22088.62525427282 22743.054600295738 1.0337212573564674 1.0038146965375467 1.015881229996937 1.0407665709881744 1.0097330285315171 0.9498518160890278 1.0391758667545672 0.9627631669104046 0.9543196576531154 0.9712250901418314 1.0 14.47313841393549 -7.01685051242678 22.811951999399586 0.9798930008328426 1.0220466794157874 0.41626686642997945 0.024681480419184904 191.48069842259378 259224.64007004732 0.0038487600683385368 0.0067827428177614805 9.619433298579209e-08 7.01685051242678 0.04215367858294483 ERS(ph)QAEPSER ddPTM_A549_MK2206_60min_R1 2 ERSQAEPSER 10 1 O43290;E9PQI8 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 ERS(1)QAEPSER;ERS(1)QAEPSER 110.51 5.1603e-05 37769000.0 950.28 834.76 1096.95 965.4300000000001 1668.65 1332.79 736.77 871.06 1416.46 1250.13 1506.9099999999999 True False 1110.6640318846069 877.2457184517605 1252.5140047135303 1201.960393339799 1423.1937954472885 1473.8249531655997 870.6315720946466 994.5354225093711 1095.6340716218217 967.7247647470075 1132.702658399756 0.9805433258660444 0.7744713159683968 1.1057747551180286 1.0611437912910773 1.2564584225995625 1.3011578477689543 0.7686320550572782 0.8780198537844142 0.9672742122541642 0.8543502194249074 1.0 10.145553478961478 -13.289956346824159 15.609702495284155 1.0884796599850484 0.9990531184072391 0.0 0.16874988429694768 0.0 0.0 0.0 0.021332918849977525 5.129129369221899e-14 13.289956346824159 -0.08942654157780927 ERS(ph)QAEPSER ddPTM_A549_PD325901_60min_R1 2 ERSQAEPSER 10 1 O43290;E9PQI8 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 ERS(0.998)QAEPS(0.002)ER;ERS(1)QAEPSER 150.9 7.284500000000001e-09 33992800.0 1992.4 2021.94 2117.3 2297.11 2390.9300000000003 2385.9700000000003 1925.69 1866.6399999999999 2078.7 2077.2599999999998 2342.8 True False 2194.666981272643 2192.335979799048 2260.992710359209 2438.9972675846734 2222.9993250607213 2366.539451385832 1998.973186728001 1829.4084008492484 1991.33946787397 1946.1014490925895 2054.650452232819 1.0681461554142535 1.0670116551536073 1.100426940213677 1.1870618989883066 1.0819355295422415 1.1517966225418432 0.9729018308470364 0.8903745154613542 0.9691864938437348 0.9471691143268346 1.0 11.004677260698429 -7.7720921751645555 24.99914909501657 0.9755809069890155 1.1093442006434173 0.74904408300277 0.043561920610416915 91.83389889927788 215508.3402128624 0.007027605172734702 0.009763959204730121 1.6900821885706443e-08 7.7720921751645555 0.13376329365440187 ERS(ph)RT(ph)GSESSQTGTSTTSSR ddPTM_A549_PD325901_60min_R1 1 ERSRTGSESSQTGTSTTSSR 20 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 ERS(0.388)RT(0.388)GS(0.388)ES(0.388)S(0.388)QT(0.059)GT(0.002)STTSSR 46.702 0.0091637 3228400.0 168.58 0.0 0.0 0.0 100.17 131.34 89.785 0.0 224.49 224.57 145.14 True False 185.69411749796328 0.0 0.0 0.0 93.13440476773988 130.27041058563825 93.2018173072372 0.0 215.0554659850039 210.39061187464404 127.28870011826508 1.4588421228705548 0.0 0.0 0.0 0.7316784968438508 1.023424785268471 0.7322081003313142 0.0 1.6895094834434945 1.6528616576268609 1.0 6.991960541402631 -8.76612223824817 24.999377651893173 1.3256017040239236 0.47752572556068257 0.42282658811357476 0.4906501847611099 92.29161537844485 492696.21356282354 0.0883477467872819 0.09556598933319466 1.7134749581687812e-09 8.76612223824817 -0.848075978463241 ERS(ph)RTGSES(ph)S(ph)QTGTSTTSSR ddPTM_A549_MK2206_60min_R1 1 ERSRTGSESSQTGTSTTSSR 20 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 3 ERS(0.787)RT(0.473)GS(0.133)ES(0.628)S(0.971)QT(0.007)GT(0.001)STTSSR 93.446 7.933499999999999e-07 49815000.0 1899.2 2421.2 2188.5 1950.7 2730.5 2246.3 1728.8 2139.8 3850.9 3422.7 4280.9 True False 2219.738529018022 2544.4287382186517 2498.86220822787 2428.62158757025 2328.8470670714773 2484.001975026737 2042.9005820503348 2443.1232028626637 2978.6772986236624 2649.5096928316107 3217.8343831705356 0.6898237338215372 0.7907270652356021 0.7765664452145415 0.7547379070445902 0.7237311774811921 0.7719483600579987 0.6348681562776586 0.7592445452259267 0.9256776278488169 0.8233828647890343 1.0 11.651874359409822 -8.817117742512414 2.998416666623922 0.9692442726462144 0.736922253132554 0.6055670413394673 0.0612638412263201 0.06793790068887802 1.1904391141413695 0.008362086544938472 0.008928501656217645 1.5236396205778075e-09 8.817117742512414 -0.23232201951366038 ERS(ph)RTGSES(ph)S(ph)QTGTSTTSSR ddPTM_A549_PD325901_60min_R1 2 ERSRTGSESSQTGTSTTSSR 20 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 3 ERS(0.85)RT(0.168)GS(0.253)ES(0.918)S(0.752)QT(0.039)GT(0.012)S(0.004)T(0.002)T(0.002)S(0.001)SR;ERS(0.905)RT(0.178)GS(0.373)ES(0.605)S(0.518)QT(0.31)GT(0.071)S(0.016)T(0.018)T(0.005)S(0.002)SR 69.845 0.00028752 265000000.0 3462.6 3817.8 3599.8 2842.9 3742.1000000000004 3446.0 3781.2999999999997 4181.2 3913.2999999999997 3923.6 4558.299999999999 True False 3814.120602968606 4139.539404570267 3844.1040753559178 3018.4994763056475 3479.267805544168 3417.9369185176583 3925.199440706756 4097.802685912053 3748.837609867324 3675.8632263942345 3997.657997444451 0.9540887703267329 1.0354911318618338 0.961589029830292 0.7550669612646349 0.8703265281242992 0.8549848237899825 0.981874748469225 1.0250508393993734 0.9377584606446603 0.9195041768815823 1.0 11.964939338411497 -7.7873025044533275 24.72710952317564 0.9755791025966516 0.9053234193638287 0.18023237900575684 0.07165672261189761 273.8954313949799 261863.91125103025 0.011882144065518498 0.016420833057511824 1.6319148542875198e-08 7.7873025044533275 -0.07025568323282294 ERS(ph)TSMR ddPTM_A549_MK2206_60min_R1 2 ERSTSMR 7 1 Q8WXA9;Q8WXA9-2 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 1 ERS(0.977)T(0.019)S(0.004)MR;ERS(0.973)T(0.021)S(0.006)MR 57.55 0.0097321 11991300.0 1618.21 1507.58 1563.8400000000001 947.4399999999999 1855.8899999999999 1720.4699999999998 1177.19 1405.26 1857.17 2411.3 2374.6 True False 1891.3242865639504 1584.3093826051863 1785.616027285844 1179.5628425321981 1582.8910394826169 1902.5289934444427 1391.0701852058278 1604.4599084282597 1436.5239602910776 1866.58565527942 1784.9212843740236 1.0596121538363763 0.8876074236297807 1.0003892288796725 0.6608486619878444 0.8868127986034637 1.0658895773724075 0.779345396003656 0.898896731454994 0.8048108187554446 1.0457523654518113 1.0 10.801644736985216 ERS(ph)TSMR ddPTM_A549_PD325901_60min_R1 1 ERSTSMR 7 1 Q8WXA9;Q8WXA9-2 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 1 ERS(0.891)T(0.093)S(0.016)MR 46.158 0.018001 6192700.0 532.48 522.08 592.26 413.43 638.09 672.14 441.62 530.49 541.39 769.27 686.99 True False 586.536977608942 566.0775138399193 632.4543251487011 438.96663213234535 593.2727596909968 666.6663146873071 458.4260907637364 519.9089607886457 518.6372610344393 720.6981609155602 602.4945851884178 0.9735141062313691 0.9395561848292633 1.0497261563785076 0.7285818709807451 0.9846939280051172 1.1065100518352724 0.760880017901527 0.8629271923266412 0.8608164683708257 1.196190270639821 1.0 9.23480446521372 -7.758378217958921 24.999834251102392 0.9142964911238398 0.956832012161223 0.0 0.13495074928820483 275.1773001484512 2247302.6322639883 0.01712450396931058 0.024802743070613392 1.7443024148602928e-08 7.758378217958921 0.04253552103738323 ERS(ph)VPR ddPTM_A549_MK2206_60min_R1 2 ERSVPR 6 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3;J3QS22 Q5M775 SPECC1 Cytospin-B 1 ERS(1)VPR;ERS(1)VPR 73.248 0.039164 39400000.0 1128.1399999999999 1259.9299999999998 1609.95 924.54 1652.38 1156.1799999999998 905.05 877.61 1560.44 1862.83 1709.0 True False 1318.5424516251007 1324.05505540386 1838.265118636719 1151.052341504177 1409.3170908945494 1278.526200189829 1069.485869843045 1002.0139050679045 1207.0028315106358 1442.0154092083778 1284.6081339994978 1.0264160849736736 1.0307073576449717 1.4309928996895467 0.8960338262225476 1.0970793766553406 0.9952655337852071 0.8325386096640294 0.7800152268600661 0.9395883457103407 1.1225333010455167 1.0 10.327112621236886 ERS(ph)VPR ddPTM_A549_PD325901_60min_R1 1 ERSVPR 6 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3;J3QS22 Q5M775 SPECC1 Cytospin-B 1 ERS(1)VPR 58.815 0.056665999999999994 22341000.0 477.15 446.46 476.25 433.61 470.04 574.32 414.14 461.06 605.28 621.17 655.48 True False 525.5899167407349 484.0847510515062 508.5711889239002 460.3931049002402 437.0260119499695 569.6429283351891 429.90032432610366 451.86379660542684 579.8421865178994 581.9492201904643 574.8601154300706 0.9142918470653072 0.842091385465745 0.8846868573294956 0.8008784964248319 0.7602301850825341 0.9909244232555979 0.7478346693168685 0.7860413072271915 1.008666579841083 1.0123318779127513 1.0 9.167067127871167 -8.772307647784027 24.997320892287387 1.0040925697296732 0.8402527850057839 0.5477074131005247 0.06721810249341503 107.52833113374108 247317.39072327106 0.011069060087826151 0.011840206530014039 1.6892438723430637e-09 8.772307647784027 -0.16383978472388927 ERSDS(ph)GGSSSEPFDR ddPTM_A549_MK2206_60min_R1 2 ERSDSGGSSSEPFDR 15 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 ERS(0.122)DS(0.878)GGSSSEPFDR;ERS(0.027)DS(0.973)GGSSSEPFDR 122.1 1.2307e-07 78581000.0 1017.71 1208.5900000000001 895.84 949.85 1363.23 1094.3400000000001 1174.9099999999999 1014.47 1363.4499999999998 1788.31 1690.72 True False 1189.4745673793868 1270.1020686947306 1022.8835826451246 1182.5632926403866 1162.7006728598608 1210.1423324358989 1388.375938718626 1158.274229184077 1054.6307519822471 1384.329528964765 1270.8675625018313 0.9359547780398029 0.9993976604410346 0.8048703207370207 0.9305165443930217 0.9148873629058302 0.9522174994014414 1.0924631170737158 0.9114043534984063 0.829851027046516 1.0892791426980575 1.0 10.311597979145745 ERSDS(ph)GGSSSEPFDR ddPTM_A549_PD325901_60min_R1 2 ERSDSGGSSSEPFDR 15 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 ERS(0.486)DS(0.512)GGS(0.001)S(0.001)S(0.001)EPFDR;ERS(0.46)DS(0.539)GGS(0.001)SSEPFDR 87.49 1.0980999999999999e-05 90323000.0 990.91 1057.3000000000002 880.29 913.66 1160.75 724.39 954.85 1161.06 1184.6799999999998 1103.43 1183.79 True False 1091.506453730613 1146.402381594673 940.0317730137954 970.0947031275875 1079.222924370111 718.4908080107393 991.1873392639687 1137.90174746605 1134.892019435673 1033.7592414874584 1038.1913346630915 1.051353847106442 1.104230350724992 0.9054513764737303 0.9344083992402014 1.0395221847236231 0.6920601087890029 0.954725112963521 1.0960424244297087 1.0931434134960896 0.9957309476320457 1.0 10.01985663599921 -8.236144362428593 19.64084043339693 1.0491176679670853 0.950804680692134 0.15033882287092193 0.10453930979046293 75.05648334140457 58278.10329641965 0.017141290705293008 0.02211438585542168 5.80571399575643e-09 8.236144362428593 -0.0983129872749513 ERSDT(ph)FINLR ddPTM_A549_MK2206_60min_R1 2 ERSDTFINLR 10 1 P17655-2;P17655 P17655-2 CAPN2 Calpain-2 catalytic subunit 1 ERS(0.404)DT(0.596)FINLR;ERS(0.003)DT(0.997)FINLR 122.39 1.4523e-05 12271300.0 682.0699999999999 498.01 724.36 654.73 794.27 667.8 709.88 523.28 1134.23 996.46 1073.05 True False 797.1867409895339 523.3565818273053 827.0851401196893 815.1388793919463 677.4339351631069 738.4661527502361 838.8560071644451 597.4565424777899 877.3287159931234 771.3589939284738 806.5820703266006 0.9883516759388633 0.6488571976505604 1.0254196944705039 1.0106087270968978 0.8398822142039444 0.915549923458151 1.0400132088539684 0.7407262874512797 1.0877116517577388 0.9563304495674391 1.0 9.655677525919707 -8.804590671382982 24.999939829952968 1.0414194209917655 0.9036181216042327 0.14029816703831133 0.12015382641960766 144.6924379644711 83827.73948782115 0.019470073479601904 0.020727537642975854 1.5682284509985704e-09 8.804590671382982 -0.13780129938753283 ERSDT(ph)FINLR ddPTM_A549_PD325901_60min_R1 2 ERSDTFINLR 10 1 P17655-2;P17655 P17655-2 CAPN2 Calpain-2 catalytic subunit 1 ERS(0.168)DT(0.832)FINLR;ERS(0.271)DT(0.729)FINLR 119.39 2.3363000000000003e-05 22520000.0 1579.44 1439.21 1460.0900000000001 1441.3000000000002 1535.4 1204.19 1624.8600000000001 1855.39 1428.9699999999998 1298.56 1453.35 True False 1739.7835860777257 1560.4972776079346 1559.1804876344295 1530.3258275702033 1427.5588008424468 1194.3834758879223 1686.6949364575087 1818.3827909247034 1368.915360277033 1216.5686999863638 1274.5971635447193 1.3649674076155163 1.2243062531757976 1.2232731503169751 1.2006348918228327 1.1200078280986703 0.937067420239883 1.3233160913105475 1.4266333261465047 1.0739984360784314 0.9544730953292133 1.0 10.315825639992442 -14.999999951232613 0.052616613481966716 0.0806787736937789 1.6207231078923343 0.3183338403371757 0.13063576835407456 318.9978952062864 1.2778219629586698 39.38227117877299 8.58675634458961 1.0000001122910637e-15 14.999999951232613 1.5400443341985555 ERSDYDRS(ph)R ddPTM_A549_MK2206_60min_R1 2 ERSDYDRSR 9 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 ERSDYDRS(1)R;ERSDYDRS(1)R 86.463 0.00039114 208430000.0 4695.4 4626.700000000001 4319.6 4112.6 6141.7 5115.9 4685.6 4016.4 8013.9 7407.9 6969.9 True False 5487.868728491584 4862.1792677665 4932.1842333384075 5120.187184621628 5238.264065860791 5657.261142340421 5536.912868611203 4585.736999709133 6198.764445568617 5734.4502449900065 5239.081470545992 1.0474868083927058 0.9280594881185894 0.9414215566348884 0.9773062727516675 0.9998439793903194 1.0798192725471873 1.0568480180618707 0.8752940807448886 1.1831777154865681 1.0945525999603114 1.0 12.355098181530444 -7.331090405992056 0.8534831746523951 1.0738238318611233 0.9645706085887342 0.1279627066015887 0.07759732786387152 0.7549264496390882 1.085866682087607 0.016540829835735182 0.03912123617661091 4.665622471129169e-08 7.331090405992056 -0.10925322327238907 ERSDYDRS(ph)R ddPTM_A549_PD325901_60min_R1 2 ERSDYDRSR 9 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 ERSDYDRS(1)R;ERSDYDRS(1)R 99.75200000000001 0.00026171 287860000.0 2604.8 2802.8 3366.9 2572.8 3144.8 2705.8 3271.6000000000004 2791.8 2986.8999999999996 3980.2 3791.1000000000004 True False 2869.237378447588 3039.0017924274543 3595.398080814446 2731.7160127472553 2923.9200969710328 2683.7648619051324 3396.102528288213 2736.115358875268 2861.3709802245453 3728.8894927348183 3324.8187337629515 0.8629755809876145 0.9140353311796893 1.0813816838505537 0.8216135168534627 0.8794224079884827 0.8071913318617856 1.0214399040168376 0.8229367006058094 0.8606096179523487 1.1215316657322094 1.0 11.699059972936112 -10.891920615136582 1.1582451404923575 0.9996549894169304 0.896045233719399 0.28520013631694563 0.08945708352645342 0.6578822842930357 1.575830191531501 0.05394009319160828 0.013104409178492534 1.2825650018042842e-11 10.891920615136582 -0.10360975569753139 ERSDYDRS(ph)RER ddPTM_A549_MK2206_60min_R1 1 ERSDYDRSRER 11 3 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 ERS(0.001)DYDRS(0.999)RER 50.155 0.0079623 22416000.0 656.57 607.55 633.3 345.12 456.86 542.78 517.9 458.61 707.68 1045.3 709.12 True False 767.3829644046772 638.4716999441362 723.1114628607305 429.67441549302566 389.6564991987824 600.2166193317958 611.9957261938155 523.6193719342214 547.3916099327416 809.1660040076206 533.0259332836298 1.4396728498317606 1.1978248337954644 1.356615912486858 0.8061041474025065 0.7310272819154585 1.1260551914130095 1.1481537538402748 0.9823525259053333 1.0269511777046458 1.518061230197318 1.0 9.058061915835209 -6.243233882694144 24.717190375805675 0.9973890819070381 1.3180166082492764 0.26907350981312494 0.2022073769603422 410.2961142797076 557048.5732743093 0.01781116338931903 0.04701834557808656 5.711709583908476e-07 6.243233882694144 0.32062752634223823 ERSDYDRS(ph)RER ddPTM_A549_PD325901_60min_R1 1 ERSDYDRSRER 11 3 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 ERSDYDRS(1)RER 65.043 0.0017339000000000002 29914000.0 844.33 955.33 953.08 1047.5 941.16 922.84 817.59 1459.8 780.22 883.62 1040.7 True False 930.0457600371059 1035.8390118309264 1017.7617401356227 1112.201695954893 875.0561684257364 915.3246970066269 848.7038348524151 1430.6831438090546 747.4300666881361 827.8280824004669 912.7004975408468 1.0190043311502444 1.1349166726893 1.1151103159008349 1.2185834224387697 0.9587550031839162 1.0028752032817454 0.929882077569956 1.5675275160513717 0.8189215067834296 0.9070095662607202 1.0 9.83399770759645 ERSES(ph)LDPDSSMDTTLILK ddPTM_A549_MK2206_60min_R1 1 ERSESLDPDSSMDTTLILK 19 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 ERS(0.386)ES(0.534)LDPDS(0.037)S(0.037)MDT(0.005)T(0.001)LILK 60.036 0.00067775 4176100.0 1748.3 1857.1 1522.5 2064.3 2546.4 1971.8 2105.2 1834.3 2825.8 3539.9 2828.8 True False 2043.3702981688132 1951.6184576845624 1738.413393660923 2570.0535926699486 2171.827933195682 2180.454567225092 2487.6875898498165 2094.3176423081522 2185.7608118753415 2740.234131432677 2126.3308890917374 0.9609841575699628 0.917833845943985 0.8175648496568126 1.2086799876042564 1.0213969727559093 1.025454024305913 1.1699437762071137 0.9849443720411457 1.0279495176825417 1.2887148211458135 1.0 11.054150404064815 -6.232661322260327 24.998149712939046 1.034573019422186 0.9006982558940503 0.3009921538996302 0.10788237833908873 564.1559674410861 490055.2428667851 0.010215280796319871 0.027022455446248702 5.85246301382801e-07 6.232661322260327 -0.13387476352813577 ERSES(ph)LDPDSSMDTTLILK ddPTM_A549_PD325901_60min_R1 2 ERSESLDPDSSMDTTLILK 19 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 ERS(0.121)ES(0.879)LDPDSSMDTTLILK;ERS(0.228)ES(0.772)LDPDSSMDTTLILK 129.29 5.2433e-17 5186700.0 1955.3 2091.0 2658.6000000000004 1841.94 2362.2 2524.1000000000004 2138.97 2316.2 2781.0 2563.3 3287.8 True False 2153.800616584217 2267.2159083651377 2839.0285834605374 1955.7124504507453 2196.2872211476 2503.5445664626886 2220.369673839294 2270.0015739762507 2664.1242411880075 2401.452800544485 2883.421443081385 0.7469600469789618 0.7862936282884351 0.9846041029737898 0.6782610482221988 0.7616948352858627 0.8682548201442455 0.7700468757929757 0.7872597255676924 0.9239454910694483 0.8328483532321097 1.0 11.493566002316093 -8.960074187231818 1.963341324896846 0.9726210740424894 0.799160087792342 0.22563971599304022 0.08597765653226215 0.1800778722794342 1.3852349152977679 0.014474452502046285 0.014595911830133373 1.0962909090876083e-09 8.960074187231818 -0.1734609862501474 ERSPALKS(ph)PLQSVVVR ddPTM_A549_MK2206_60min_R1 2 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ERSPALKS(0.999)PLQS(0.001)VVVR;ERS(0.012)PALKS(0.984)PLQS(0.004)VVVR 114.02 4.0313e-08 24841000.0 2490.8999999999996 2535.3 2633.7 2056.65 3333.9 2401.3 2702.5 2582.8999999999996 3674.0 3845.5 3665.0 True False 2911.303023341927 2664.3359408581496 3007.198262650097 2560.529342326528 2843.4877263906237 2655.403972146066 3193.5092682733884 2949.0339847995033 2841.844866172413 2976.798879184259 2754.8793511457916 1.0567805890051327 0.967133438983459 1.0915898227627874 0.9294524427218815 1.0321641581900778 0.9638912030908531 1.159219283757441 1.070476637596837 1.0315678125760575 1.0805550805505033 1.0 11.42777342258192 ERSPALKS(ph)PLQSVVVR ddPTM_A549_PD325901_60min_R1 2 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ERS(0.001)PALKS(0.999)PLQSVVVR;ERSPALKS(0.997)PLQS(0.003)VVVR 124.85 7.090300000000001e-09 30217000.0 3882.7 3884.4 4122.0 3982.2999999999997 4227.200000000001 4452.5 4125.299999999999 3943.3 4736.8 4545.4 4382.2 True False 4276.868845707332 4211.752020302984 4401.743707599611 4228.277626540497 3930.2960550483167 4416.2403162216715 4282.290548950779 3864.647788040993 4537.728768665714 4258.402668277183 3843.217181054578 1.1128355864952082 1.095892275113966 1.14532785950748 1.100192215882075 1.0226578072202115 1.1490998577941036 1.1142463064696542 1.0055762154405583 1.1807109915710154 1.1080307116832462 1.0 11.908098790382914 -11.092547488995848 1.42431463530112 1.0000215059901068 1.110722690574465 0.0 0.05823344166979792 0.3546969371126225 1.2860959470710887 0.03713508517690938 0.008128537375005405 8.080765631665744e-12 11.092547488995848 0.11070118458435818 ERSPS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 ERSPSPLR 8 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 ERS(0.002)PS(0.998)PLR 95.477 0.00069959 249140000.0 1976.7 2247.9 2068.6 2051.6 2340.2 2096.7 1724.1 1907.3 3017.7 3427.4 3151.1 True False 2310.3186343249386 2362.3085084428008 2361.9585853050817 2554.242092099824 1995.9596800441952 2318.571402323182 2037.3466528881215 2177.6656158612777 2334.1957682766697 2653.147959567322 2368.594904064258 0.9753962698985278 0.9973459388894781 0.997198204408956 1.0783786149826695 0.842676675787548 0.9788805161848314 0.8601498928298167 0.9193913286415647 0.9854769864916271 1.1201358049934165 1.0 11.20981576315933 -4.119158266611432 13.974656826610596 0.9758951061469878 0.9690475441930153 0.0 0.07818451969704761 0.0 0.0 0.008373816739828371 0.0 7.60049247539939e-05 4.119158266611432 -0.006847561953972514 ERSPS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 ERSPSPLR 8 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 ERS(0.008)PS(0.992)PLR;ERS(0.119)PS(0.881)PLR 101.3 0.00064322 561570000.0 5060.1 4510.1 4205.2 3837.5 5179.2 4730.5 4167.7 4458.9 5326.6 4795.1 5162.3 True False 5573.797626951266 4890.1819551973285 4490.590159921853 4074.533659405158 4815.430859270024 4691.976376392277 4326.304104152948 4369.963741560617 5102.741525750463 4492.336567663116 4527.369826515915 1.2311337135099123 1.0801375064516476 0.9918761514955879 0.8999780922559972 1.0636265743229087 1.0363580966839276 0.9555888451645005 0.965232333344318 1.1270874086461216 0.9922618959362197 1.0 12.144457445254472 -5.310291564550314 3.2127989097223484 1.0324998802463994 1.249369943290094 0.49402496801678863 0.062146523009315106 0.2341158116480735 3.8716779343944783 0.01006720484120077 0.1175956254743962 4.894501156371497e-06 5.310291564550314 0.2168700630436946 ERSPS(ph)PSFR ddPTM_A549_MK2206_60min_R1 2 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 ERS(0.021)PS(0.942)PS(0.037)FR;ERS(0.111)PS(0.673)PS(0.216)FR 84.169 0.00038333 22514600.0 3358.8 3139.0 2554.86 2452.6 2844.5 2841.3 2670.2 2461.8 3516.7 4144.9 4643.7 True False 3925.683325224162 3298.761692246966 2917.1775651419043 3053.487110101396 2426.077818086364 3141.9644800977017 3155.3407763713567 2810.767688946308 2720.1730650159284 3208.56421124193 3490.5411303999194 1.124663248066178 0.945057390533891 0.8357379145988394 0.8747890358626288 0.6950434696090811 0.9001367875982368 0.9039689430646651 0.805252705509381 0.7792983848049577 0.9192168467226505 1.0 11.769234996061869 -5.326279994281577 2.7345809614105594 0.8709690887339658 1.1545791595753476 0.497921902659583 0.07761052044558678 0.31008172077386204 3.3587747948178928 0.013423844097294878 0.183152777751504 4.717587952750779e-06 5.326279994281577 0.2836100708413818 ERSPS(ph)PSFR ddPTM_A549_PD325901_60min_R1 1 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 ERS(0.136)PS(0.826)PS(0.037)FR 62.089 0.0020461 10031000.0 2125.3 1545.6 1514.0 1603.3 1944.6 1708.8 1826.2 1702.0 1568.7 2276.1 2467.7 True False 2341.058891436832 1675.8531362836711 1616.7491444215957 1702.3321996415093 1808.018004505809 1694.8840993508338 1895.6970403349835 1668.0522748068304 1502.7729943011973 2132.3866575583447 2164.1885440391547 1.0817259419863545 0.7743563475093191 0.7470463462504796 0.7865914475567571 0.8354253650799743 0.783149926571356 0.8759389497538558 0.7707518272385105 0.6943817341794454 0.9853053993061731 1.0 11.079610476849512 -11.024290318321997 1.3302874063445673 0.9994033840256983 0.7992226081182379 0.31789861132579134 0.09666096549534954 0.37989073869849366 1.2035106471704091 0.0675756300026817 0.015436074943385695 9.456048296246118e-12 11.024290318321997 -0.20018077590746042 ERSRTGS(ph)ES(ph)S(ph)QTGTSTTSSR ddPTM_A549_MK2206_60min_R1 1 ERSRTGSESSQTGTSTTSSR 20 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 3 ERS(0.518)RT(0.354)GS(0.609)ES(0.764)S(0.718)QT(0.016)GT(0.006)S(0.005)T(0.006)T(0.002)S(0.001)SR 69.639 0.00029707 30727000.0 1675.9 1635.5 1468.7 948.33 1998.4 1741.3 1285.6 1589.5 2607.5 2561.7 2365.6 True False 1958.7509481788675 1718.73996421469 1676.9837446763859 1180.6708925721516 1704.438007264473 1925.5632102186091 1519.176878924057 1814.8164926395953 2016.9054133218729 1983.0101908220822 1778.1562327613863 1.1015629066164938 0.9665854622602954 0.9431025878261076 0.6639860271100193 0.9585423237066 1.0828987772510335 0.8543551184840786 1.0206170072138585 1.1342678310047714 1.1152058262858986 1.0 10.796166372793707 -8.509928459722518 22.354130431671734 1.0641431111178683 0.9358280769100105 0.23564476288602376 0.11393293717475438 185.84713721057892 320800.534955856 0.01965646347359182 0.023189777289542975 3.0908045313209452e-09 8.509928459722518 -0.12831503420785784 ERT(ph)PKSDKEK ddPTM_A549_PD325901_60min_R1 1 ERTPKSDKEK 10 3 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 ERT(0.998)PKS(0.002)DKEK 41.052 0.041226 5225400.0 1886.4 2252.5 1921.6 1983.8 1713.4 1633.2 1861.3 1630.7 1606.1 2153.8 2056.4 True False 2077.9059393057178 2442.3260801494384 2052.0113315195085 2106.3348204633094 1593.05669490911 1619.899760685734 1932.132790042442 1598.1744092405977 1538.6012023632004 2017.8087004301922 1803.4758365936357 1.1521673299656843 1.3542327712925994 1.1378091626640816 1.1679307134171018 0.8833257771382397 0.8982098500112782 1.0713383294848078 0.886163472120144 0.8531310323898076 1.118844322439819 1.0 10.816564378339239 -6.673343537787059 4.578829620184173 0.9313695250950251 1.2170817721613136 0.5929321249338958 0.09592749837709348 0.08725719766608035 3.266776771508597 0.012065109647333911 0.02554862981373324 2.1215655866802037e-07 6.673343537787059 0.2857122470662885 ERT(ph)SSLTQFPPSQSEER ddPTM_A549_MK2206_60min_R1 2 ERTSSLTQFPPSQSEER 17 1 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 ERT(0.326)S(0.326)S(0.326)LT(0.021)QFPPSQSEER;ERT(0.332)S(0.332)S(0.332)LT(0.003)QFPPSQSEER 74.69800000000001 0.00020135 6094700.0 1136.7 1384.6 1098.4 770.96 1042.8 856.35 953.08 798.98 1617.3 1526.0 1712.8 True False 1328.5471703531932 1455.0702258952363 1254.1696365170171 959.84523460971 889.4055013888074 946.9683886008761 1126.2422991326541 912.2378617736289 1250.9841322973987 1181.275540146972 1287.4644891248317 1.0319097587353947 1.1301828036316064 0.9741392070312967 0.7455314245305324 0.6908194431004389 0.7355297148774863 0.8747754277077031 0.7085538043800592 0.9716649607538062 0.9175208715464899 1.0 10.330316925058892 -5.970314415488395 7.0590612701783675 0.9049428889439487 1.0756549008167127 0.2881940559863485 0.11985194570106385 0.2447744277336133 41.01231536919291 0.020612341106159077 0.06402262745509599 1.0707438398429512e-06 5.970314415488395 0.17071201187276397 ERTDVIQGDDVADATS(ph)EVEVSSTSETTPK ddPTM_A549_MK2206_60min_R1 1 ERTDVIQGDDVADATSEVEVSSTSETTPK 29 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ERTDVIQGDDVADAT(0.447)S(0.55)EVEVS(0.002)STSETTPK 108.1 2.9823e-15 4951600.0 550.17 761.49 782.14 824.64 911.67 960.22 600.98 736.95 1163.2 888.69 975.2 True False 643.0252456349223 800.2465884132343 893.059212951038 1026.6768370194966 777.5645506819463 1061.82984305755 710.170286788877 841.414919314721 899.7370572487072 687.9343117779894 733.0309258492155 0.8772143479348818 1.091695534518069 1.218310417007891 1.400591435934429 1.0607527230602702 1.4485471289324137 0.9688135408013592 1.1478573272197798 1.2274203250106575 0.9384792476265831 1.0 9.517730255293595 -10.906026501370835 1.0715312178696357 0.9966215059477624 1.1713157098804872 0.16218233793477843 0.1613470047550161 0.8748684974153506 1.726103328088444 0.11837154960904989 0.02600512536515124 1.2415765422173724e-11 10.906026501370835 0.17469420393272472 ERTDVIQGDDVADATS(ph)EVEVSSTSETTPK ddPTM_A549_PD325901_60min_R1 1 ERTDVIQGDDVADATSEVEVSSTSETTPK 29 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ERTDVIQGDDVADAT(0.175)S(0.8)EVEVS(0.019)S(0.004)T(0.001)SETTPK 118.74 4.396e-21 8647300.0 972.22 1080.5 982.39 964.63 1287.4 1102.8 1274.4 1231.3 844.25 952.98 970.15 True False 1070.9190586894645 1171.5575270150805 1049.0608929909715 1024.213004266319 1196.9774652888918 1093.8191624321742 1322.897989378438 1206.7407555638363 808.7691084584595 892.8086801634157 850.8277002875493 1.258679117202616 1.3769621353643469 1.2329886446297253 1.2037842725620849 1.4068388521957575 1.2855942067500887 1.554836530276748 1.4183139020462088 0.9505674394300098 1.0493413412159458 1.0 9.732723193474033 -8.766191326466913 24.99862695629158 0.9766568204325424 1.3424999303312033 0.7091466034308201 0.09731362068419167 41.424508455835586 217921.93538164117 0.016902987065447152 0.018279570089236655 1.7132023976780473e-09 8.766191326466913 0.36584310989866087 ERTDVIQGDDVADATSEVEVS(ph)STSETTPK ddPTM_A549_PD325901_60min_R1 1 ERTDVIQGDDVADATSEVEVSSTSETTPK 29 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ERTDVIQGDDVADATSEVEVS(0.316)S(0.235)T(0.176)S(0.133)ET(0.1)T(0.04)PK 128.27 1.8517e-28 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ERTDVIQGDDVADATSEVEVSS(ph)TSETTPK ddPTM_A549_PD325901_60min_R1 1 ERTDVIQGDDVADATSEVEVSSTSETTPK 29 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ERTDVIQGDDVADATSEVEVS(0.047)S(0.325)T(0.241)S(0.179)ET(0.133)T(0.075)PK 141.12 5.0706e-36 9827300.0 1044.7 1174.3 1208.0 1083.1 1376.5 1525.1 1454.2 1709.9 1877.0 2188.8 2377.9 True False 1150.7571749325084 1273.2623822062078 1289.9821442941122 1150.0006271014277 1279.8193886672045 1512.6800912452927 1509.5403767687742 1675.7947031093995 1798.1162174433261 2050.598794457055 2085.433374750052 0.5518072113286436 0.6105504964208285 0.6185679005203042 0.5514444340564273 0.6136946901123592 0.7253552712642253 0.7238497259351184 0.803571441504455 0.8622266427757914 0.983296239182337 1.0 11.026131506525717 -8.333865401446934 0.4405299451163228 0.9902086187614186 0.5528522879641251 0.9644970879058374 0.029181568991756716 0.11923048809346448 0.05545490393361512 0.012956055527895128 0.017414930299457055 4.63590575607721e-09 8.333865401446934 -0.4373563307972935 down ERTDVIQGDDVADATSEVEVSSTSET(ph)TPK ddPTM_A549_MK2206_60min_R1 2 ERTDVIQGDDVADATSEVEVSSTSETTPK 29 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ERTDVIQGDDVADATSEVEVS(0.093)S(0.071)T(0.054)S(0.071)ET(0.58)T(0.131)PK;ERTDVIQGDDVADATSEVEVSS(0.016)T(0.002)S(0.075)ET(0.554)T(0.352)PK 231.28 5.7107999999999994e-105 45952000.0 2984.6000000000004 2579.2 2500.7 2663.9 3853.8999999999996 2691.25 2171.86 1989.77 3558.6000000000004 3025.2 2970.2 True False 3488.327513535798 2710.47026334609 2855.336862744085 3316.5556195870154 3286.996415230461 2976.036288692834 2566.4588489888038 2271.8259909150593 2752.582781916479 2341.8052189073524 2232.6173666502664 1.5624385824650067 1.214032598614413 1.278919041567845 1.4855011293596845 1.4722614203087314 1.3329808919107196 1.1495291971321626 1.0175617303934261 1.2328949971603727 1.0489057614117314 1.0 11.12452030315914 -7.744052324336283 3.4425110471803824 1.1052853171136952 1.3906798034031413 0.6628062068656935 0.10773833855793533 0.1360446291202577 3.3928028497441427 0.019112854166014378 0.028136129316187152 1.8028005241378432e-08 7.744052324336283 0.2853944862894462 ERTESEVPPRPAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 ERTESEVPPRPASPK 15 2 A0A3B3IU28;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;Q9Y3L3 A0A3B3IU28 SH3BP1 SH3 domain-binding protein 1 1 ERTESEVPPRPAS(1)PK 59.9 0.0019037 4694900.0 883.12 1121.6 878.17 942.99 1052.1 694.43 687.29 718.79 1498.8 1374.0 1640.9 True False 1032.169065788961 1178.6846492590614 1002.7077109433259 1174.0225923324303 897.3374837084423 767.9141216746726 812.1616965741413 820.680683702054 1159.3241930917834 1063.612445715556 1233.4192434638824 0.8368355457875467 0.9556236904078887 0.812949624595903 0.9518439075389767 0.7275202559580615 0.6225897039826419 0.658463617199048 0.6653704229530983 0.9399271166193146 0.8623284024080506 1.0 10.268447544792894 -8.906149947240122 6.795530829435088 0.9737727696200374 0.7809581759224665 0.2679229645777408 0.11011600334499476 0.17413288625214418 10.690954128237683 0.020379413188535447 0.021596596542416028 1.2412236809187398e-09 8.906149947240122 -0.19281459369757092 ERTESEVPPRPAS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ERTESEVPPRPASPK 15 2 A0A3B3IU28;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;Q9Y3L3 A0A3B3IU28 SH3BP1 SH3 domain-binding protein 1 1 ERT(0.002)ES(0.01)EVPPRPAS(0.988)PK 50.236999999999995 0.004868600000000001 13089000.0 3392.0 3454.6 3157.1 3297.7 2791.3 2573.4 2865.1 2861.4 3032.1 3281.4 4604.1 True False 3736.3533429415775 3745.731265919755 3371.3597911845554 3501.391439379905 2595.248717462237 2552.4430836080514 2974.1329483428763 2804.327132275125 2904.6713814117807 3074.211843992773 4037.8248877945716 0.9253381329724639 0.9276606514666474 0.8349445270337035 0.867147916682523 0.6427343407850808 0.6321331792578494 0.7365680857862373 0.6945143016855362 0.7193653667824831 0.7613534339454437 1.0 11.979362629955448 -5.8609456233354535 2.2240961317997106 0.8104885133226848 0.932587549550176 0.16042262087820613 0.10823538059237746 0.6626771047687802 6.322811002855975 0.020884538492784325 0.09877540321188495 1.377381915813876e-06 5.8609456233354535 0.12209903622749119 ERTS(ph)TSSSSVQAR ddPTM_A549_MK2206_60min_R1 1 ERTSTSSSSVQAR 13 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 ERT(0.101)S(0.752)T(0.02)S(0.027)S(0.027)S(0.037)S(0.037)VQAR 54.523999999999994 0.016355 3852200.0 262.9 383.46 368.51 272.4 432.67 269.67 243.27 268.23 375.05 572.14 466.84 True False 307.2710927121091 402.9764761099146 420.77025924334106 339.1380122285006 369.02481615448323 298.2063004075417 287.4690100621154 306.2524239199237 290.10177383178103 442.89317663151246 350.9107438714599 0.8756388856097944 1.1483731494340528 1.1990805827178406 0.9664509227814589 1.0516201700842156 0.8498066976164627 0.8192083459474142 0.8727359571301848 0.8267110052864228 1.262124868977355 1.0 8.454960309338082 -7.246985320550487 22.384708613770034 0.8999582414662142 1.057633158262289 0.09438902716531239 0.14334584658853855 177.85883879601093 275444.77781438 0.015323578619332206 0.026434608350113638 5.662584286356478e-08 7.246985320550487 0.15767491679607493 ERTS(ph)TSSSSVQAR ddPTM_A549_PD325901_60min_R1 2 ERTSTSSSSVQAR 13 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 ERT(0.117)S(0.767)T(0.019)S(0.024)S(0.024)S(0.024)S(0.024)VQAR;ERT(0.152)S(0.813)T(0.022)S(0.005)S(0.006)S(0.001)S(0.001)VQAR 58.831 0.008840100000000002 10988500.0 724.23 778.36 718.15 858.44 761.47 645.87 626.22 991.05 844.65 870.5999999999999 1209.46 True False 797.7532964500532 843.9551288546573 766.8879775867688 911.463889141307 707.9869741288893 640.6102488575158 650.0511447807323 971.2827302863149 809.152297849497 815.6301674224748 1060.7040873986284 0.7520978809523957 0.7956555828161774 0.7229989840687404 0.8593008172304377 0.6674688846209916 0.6039481288590197 0.6128487223755115 0.9156962265209904 0.7628445175825984 0.7689516587258599 1.0 10.050806517553431 -10.4552341648481 0.5454036913353422 1.027898193976957 0.7324966818714016 0.08543358639618703 0.11097260615032441 0.7081998423789851 0.33364242164175223 0.10341018490778942 0.021770428423776224 3.505628049589215e-11 10.4552341648481 -0.2954015121055553 ERVDDSTGTVIS(ph)DVEEDAGELSR ddPTM_A549_MK2206_60min_R1 4 ERVDDSTGTVISDVEEDAGELSR 23 1 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 ERVDDS(0.021)T(0.021)GT(0.021)VIS(0.937)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDS(0.004)T(0.004)GT(0.004)VIS(0.989)DVEEDAGELSR;ERVDDS(0.001)T(0.001)GT(0.005)VIS(0.994)DVEEDAGELSR 127.63 1.9863999999999998e-22 18157600.0 210.47 163.71 350.36 322.95 713.9300000000001 167.1 133.32 360.64 867.5700000000002 489.63 633.22 True False 245.99219050253953 172.04213973805378 400.0463163238365 402.07276449777646 608.9118427373525 184.78241108799716 157.54251827796782 411.7618244136794 671.0667802246053 379.0222429371965 475.97399801706354 0.5168185479193357 0.3614528114031265 0.8404793496923227 0.8447368263242024 1.27929644323874 0.38821954950861154 0.330989757705882 0.8650931061971958 1.4098811763254087 0.7963087154261075 1.0 8.894738952475036 -8.55756616531729 6.852145131342857 1.1918683231738332 0.6641109068603699 0.2485619095091388 0.2990442835044677 0.14339304518551788 20.272344500302466 0.051398716543831706 0.05857601199601644 2.7697070386244834e-09 8.55756616531729 -0.5277574163134633 ERVDDSTGTVIS(ph)DVEEDAGELSR ddPTM_A549_PD325901_60min_R1 2 ERVDDSTGTVISDVEEDAGELSR 23 1 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 ERVDDSTGT(0.001)VIS(0.999)DVEEDAGELSR;ERVDDSTGTVIS(0.999)DVEEDAGELSR 151.65 2.8532999999999997e-28 115912000.0 148.3 295.49 148.22 280.41999999999996 288.14 331.48 192.03 215.93 297.02 174.41 203.43 True False 163.35530682731013 320.39197932224533 158.27910051926605 297.7409065199726 267.9020404290363 328.78053678184386 199.33780673284795 211.62310675619193 284.5372823148731 163.39772283500324 178.40939964901932 0.9156205174653087 1.7958245470953047 0.8871679453585117 1.6688633396318322 1.5016139337729613 1.8428431317444383 1.117305518235029 1.186165679456986 1.594855892540621 0.915858262829491 1.0 7.479047816634894 -10.973537600247289 1.1857698030077717 0.9952052434739779 1.417109695719868 0.20713592171313988 0.3182075473252307 0.6276236474828049 1.5395198607473208 0.22009247046493943 0.04838711073453303 1.0628265621397767e-11 10.973537600247289 0.42190445224589 ERVPS(ph)VAEAPQLR ddPTM_A549_MK2206_60min_R1 2 ERVPSVAEAPQLR 13 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ERVPS(1)VAEAPQLR;ERVPS(1)VAEAPQLR 70.96 0.00069747 10351900.0 1439.1100000000001 1631.0500000000002 1045.95 941.19 1777.11 1378.45 941.37 1329.21 1792.8400000000001 1916.13 1722.74 True False 1681.9965851385452 1714.0634782221775 1194.2814378322785 1171.7815922516243 1515.6994731233824 1524.3166640589448 1112.4047437093498 1517.6295880349012 1386.7646025771774 1483.27490218992 1294.9361127947889 1.2989031416448686 1.3236664429126233 0.922270547583021 0.9048952922647535 1.170482047837968 1.1771365776255143 0.8590421818637124 1.1719725575955136 1.070913529150253 1.1454425338317658 1.0 10.338665207262913 -5.747916702950707 24.919207992558654 1.0362894980996122 1.3112850021643252 0.4607520989259385 0.10982365985484617 129.93011078955084 239427.1026336998 0.01374069851734499 0.052621982587002236 1.7868302534293453e-06 5.747916702950707 0.27499550406471296 ERVPS(ph)VAEAPQLR ddPTM_A549_PD325901_60min_R1 2 ERVPSVAEAPQLR 13 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ERVPS(1)VAEAPQLR;ERVPS(1)VAEAPQLR 76.71300000000001 0.00027093 14796200.0 2880.8 2859.5 2967.5 3001.5 3240.6000000000004 3076.6 2782.1 2898.8 3281.0 3593.1 4437.4 True False 3173.2566952671277 3100.4801004161213 3168.892395027136 3186.8958380989134 3012.991435463093 3051.5451896434797 2887.9743379235365 2840.981159935393 3143.110979984847 3366.2310527977183 3891.6279309962097 0.815405982157912 0.7967051720749768 0.8142845233963407 0.8189107218384843 0.7742239209111142 0.7841307657750111 0.7420992934399693 0.7300238384320918 0.8076596827128457 0.8649930344024445 1.0 11.926158068839172 -10.344301386032049 0.766097279496882 0.9983930956924882 0.785594721138224 0.5307798053955775 0.04721237255117935 0.17962878679954156 0.19528055363475277 0.021213264557203796 0.006759288002048347 4.5258339296603785e-11 10.344301386032049 -0.2127983745542642 ERVPS(ph)VAEAPQLRPAGTAAAK ddPTM_A549_MK2206_60min_R1 4 ERVPSVAEAPQLRPAGTAAAK 21 2 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK 149.57 1.2304999999999998e-22 336583000.0 15464.7 16932.1 16660.100000000002 14875.3 22508.600000000002 16948.4 16222.8 17605.6 26241.1 25186.7 26640.899999999998 True False 18074.763284385524 17793.871567153496 19022.75269604621 18519.749167777598 19197.614756962113 18741.868438562607 19170.272768675484 20101.24771488873 20297.532748425943 19497.006977077144 20025.229278564762 0.9025995674233284 0.8885726759793089 0.9499393206153391 0.9248208302714093 0.9586714084473161 0.9359128016888236 0.9573060314068697 1.0037961331311867 1.0135980200812311 0.9736221596197636 1.0 14.289531140393409 -7.491769278596663 0.6272994201419538 1.0084947834635818 0.9069745468144074 0.7249119725270057 0.020413521779893255 0.22931421590813697 0.17812940289831508 0.004043536378277993 0.009884811636960185 3.222780456948588e-08 7.491769278596663 -0.10152023664917442 ERVPS(ph)VAEAPQLRPAGTAAAK ddPTM_A549_PD325901_60min_R1 4 ERVPSVAEAPQLRPAGTAAAK 21 2 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK 135.34 1.9338e-18 506121000.0 14626.6 17551.1 17475.300000000003 17602.5 21168.300000000003 19265.800000000003 17762.2 19936.5 21887.6 27823.3 26532.6 True False 16111.481664466188 19030.192792590806 18661.27894551565 18689.766446821966 19681.511634670533 19108.90571235564 18438.15024084878 19538.8508676183 20967.740288179295 26066.532089645927 23269.258404009102 0.6923934310553839 0.8178254958616155 0.8019713658902196 0.8031956206907682 0.8458160244281601 0.8212081958341798 0.7923823750941731 0.8396851557698082 0.9010919009162203 1.1202132718228304 1.0 14.506137612041437 -9.524892808989339 0.2118646393367788 1.0830519095181301 0.7313977886125558 0.7996497859027516 0.04905155554669794 0.9314518845438148 0.11836765861883754 0.11029054679487582 0.0556215690721057 2.9861195513177653e-10 9.524892808989339 -0.35165412090557435 ERVT(ph)PPEGYEVVTVFPK ddPTM_A549_MK2206_60min_R1 1 ERVTPPEGYEVVTVFPK 17 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 ERVT(0.994)PPEGY(0.006)EVVTVFPK 47.808 0.009308799999999999 5829200.0 787.8 557.13 556.24 526.91 722.8 529.06 684.73 434.55 1182.2 803.93 880.58 True False 920.7613801392154 585.4855373053682 635.123196118195 656.0029736538886 616.4770774873704 585.0447780383947 809.1365777113178 496.1487932535617 914.4335875854727 622.3216546463666 661.9076832283655 1.3910722045834638 0.8845425912715523 0.9595344067022568 0.9910792551225913 0.931364135978278 0.8838766989150476 1.2224311610417684 0.7495740052958183 1.381512272414555 0.940194033722462 1.0 9.370486207055103 -8.77039768067191 24.999952566030053 1.1801585439416373 0.9971083778675659 0.01872164069235238 0.19750664692757147 269.72531103067786 752720.6615455984 0.03428753785459028 0.036761653347053475 1.6966892934070875e-09 8.77039768067191 -0.18305016607407143 ERVT(ph)PPEGYEVVTVFPK ddPTM_A549_PD325901_60min_R1 2 ERVTPPEGYEVVTVFPK 17 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 ERVT(0.962)PPEGY(0.038)EVVTVFPK;ERVT(0.997)PPEGY(0.003)EVVTVFPK 71.527 0.00039463 4041500.0 3189.9100000000003 2280.7 3098.3 2964.4 3471.2 3049.6 3092.1000000000004 3589.3999999999996 3755.5 3281.7 3542.7 True False 3513.747314912375 2472.902593117345 3308.569269591432 3147.5042553591265 3227.394886989905 3024.7650686916572 3209.7715575620427 3517.8066011701712 3597.6693951030425 3074.492901941574 3106.9703590256136 1.1309239898942363 0.7959208834849907 1.0648860102511704 1.0130461161999065 1.0387594711402584 0.973541656071757 1.0330872801015936 1.1322304993837795 1.1579348945676193 0.9895469047557233 1.0 11.601292762655238 -8.016340353331868 8.648741039322525 1.0810940133580649 0.9987179118341122 0.1030036077373161 0.08990042236995618 0.3164090012739348 144.63982648887767 0.014431390581713761 0.019113773714522157 9.630739739408984e-09 8.016340353331868 -0.0823761015239527 ES(ph)ASPTIPNLDLLEAHTK ddPTM_A549_PD325901_60min_R1 1 ESASPTIPNLDLLEAHTK 18 0 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ES(0.412)AS(0.261)PT(0.327)IPNLDLLEAHTK 152.81 3.684e-18 66945000.0 1812.7 2091.6 1858.2 2064.2 1803.1 2551.0 2254.3 1924.6 1834.5 2385.3 2241.7 True False 1996.7239695607905 2267.8664724708397 1984.3086262643376 2191.700945861661 1676.4564763573094 2530.2255017813554 2340.0886201002927 1886.212343180507 1757.4023446455956 2234.691750922156 1965.985111307117 1.015635346410755 1.1535522112692969 1.00932027147705 1.1148105513395639 0.8527310134320856 1.2870013548063415 1.1902880681250159 0.9594235136025157 0.8939041982251626 1.136677860920516 1.0 10.941036680641332 -8.386727564284921 8.42618255566474 0.9487379086289598 1.0878615474729003 0.06814597926231536 0.12166829812757031 0.3066249880900866 19.738144879780634 0.017670872914328083 0.0213628849845125 4.104615073796916e-09 8.386727564284921 0.13912363884394052 ES(ph)EELLK ddPTM_A549_PD325901_60min_R1 2 ESEELLK 7 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 ES(1)EELLK;ES(1)EELLK 72.547 0.01968 2349900.0 1289.93 795.19 823.06 822.4300000000001 1262.5900000000001 1006.87 1030.61 1173.29 1046.1 1222.3600000000001 1222.72 True False 1420.8827440037235 862.2034520195479 878.9178010618483 873.22963322595 1173.910034099038 998.6703845466848 1069.8304275214311 1149.887810521801 1002.1360549107425 1145.1799809907377 1072.3331914606943 1.3250384818064314 0.8040443575611839 0.8196312564610796 0.8143267784488397 1.094725075608244 0.9313060460119968 0.9976660575656957 1.072323247735589 0.9345379429556482 1.0679329802622393 1.0 10.066537529059062 -6.759253814737309 24.997286879381548 0.9829046024933671 0.9223427639604861 0.023295304463476496 0.14510708443082052 172.2489314221108 1970040.5822378588 0.019131916254669826 0.03834599453675234 1.7407892065539524e-07 6.759253814737309 -0.060561838532880996 ES(ph)ESEEAEAGAAELR ddPTM_A549_MK2206_60min_R1 2 ESESEEAEAGAAELR 15 0 Q8NAF0 Q8NAF0 ZNF579 Zinc finger protein 579 1 ES(1)ESEEAEAGAAELR;ES(0.846)ES(0.154)EEAEAGAAELR 96.59100000000001 1.6722e-05 6654600.0 682.8199999999999 292.17 376.9 442.37 697.45 313.2 224.36 761.3 508.0 402.93 593.59 True False 798.0633226537944 307.04020504103084 430.3500874028258 550.7506698587441 594.856028906428 346.3426161146659 265.1233078371201 869.2166063834686 392.9388111093045 311.9078331529617 446.18522074942155 1.788636838560792 0.6881451710240873 0.9645099554844091 1.2343543538571098 1.333204241743588 0.7762305876759924 0.5942001113165822 1.9481071222473823 0.8806629911437153 0.699054604787391 1.0 8.801498916927725 -5.24570548224043 23.670336760782842 1.0049811755948663 1.7886380721041288 0.2699793827277096 0.36705101222686837 1322.9523824000023 1990203.0927670537 0.0455367568166218 1.456672377420391 5.679296175665631e-06 5.24570548224043 0.7836568965092625 ES(ph)ESEEAEAGAAELR ddPTM_A549_PD325901_60min_R1 1 ESESEEAEAGAAELR 15 0 Q8NAF0 Q8NAF0 ZNF579 Zinc finger protein 579 1 ES(0.5)ES(0.5)EEAEAGAAELR 49.31 0.025419 2537400.0 0.0 247.08 137.24 236.95 167.15 170.55 215.36 0.0 105.69 151.03 0.0 True False 0.0 267.9022987273353 146.55393169116226 251.5858633475055 155.40996063619568 169.1610973456723 223.55564264951386 0.0 101.24821684687542 141.49394002505892 0.0 0.0 ES(ph)FSPEEKEEGELIGPVGTGLDSR ddPTM_A549_MK2206_60min_R1 1 ESFSPEEKEEGELIGPVGTGLDSR 24 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 ES(0.531)FS(0.469)PEEKEEGELIGPVGTGLDSR 51.568000000000005 0.0020948 5074300.0 988.99 1255.2 996.73 1067.0 1687.1 977.07 1200.3 972.95 1679.8 1747.7 1284.5 True False 1155.9073335159715 1319.0843186073237 1138.0813017166852 1328.4150478994504 1438.929824887856 1080.4628988734248 1418.3789730651424 1110.8686420344102 1299.3279820893888 1352.893356169634 965.523199603484 1.1971823504506918 1.3661860420847871 1.1787197885913734 1.375849952072614 1.4903109790409885 1.1190439539072117 1.4690262995727443 1.1505354221323898 1.3457242483898781 1.4012023291881883 1.0 9.915167114461562 -10.83390919654367 0.726015155355002 0.9648331848198388 1.3062520553536714 0.0 0.16867292468244702 0.5968673813893924 0.46067723047257825 0.12736199140193225 0.021048537984155104 1.4658542936692637e-11 10.83390919654367 0.3414188705338326 ES(ph)KGSPVFLPR ddPTM_A549_PD325901_60min_R1 1 ESKGSPVFLPR 11 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ES(0.543)KGS(0.457)PVFLPR 69.71600000000001 0.00095372 7028000.0 1731.8 2018.3 1712.4 1874.0 1877.0 2212.3 1408.9 2041.9 2078.4 2017.8 2259.2 True False 1907.611061116221 2188.389224224465 1828.613761497714 1989.7527238372027 1745.1659952984696 2194.2837622857264 1462.5164604796626 2001.1727026604376 1991.0520758306925 1890.3957636400971 1981.3327222487555 0.9627918822998781 1.1045036503211365 0.9229210929410635 1.0042496656386368 0.8808041050862757 1.107478687272311 0.7381478355739003 1.0100134521521273 1.0049054626074645 0.9541031359410208 1.0 10.952255454860092 ES(ph)KSSPRPTAEK ddPTM_A549_MK2206_60min_R1 2 ESKSSPRPTAEK 12 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ES(0.4)KS(0.3)S(0.3)PRPTAEK;ES(0.379)KS(0.31)S(0.31)PRPTAEK 53.328 0.004713899999999999 81286000.0 21031.3 23944.6 20429.5 17076.2 25027.5 19502.8 18102.2 15863.5 28812.0 35474.0 35223.0 True False 24580.86927408211 25163.277864344287 23326.71029608921 21259.86976657976 21345.987903728783 21566.5733510891 21391.13542132784 18112.19970493125 22286.12800330962 27460.39876223701 26476.156994654353 0.9284153013235679 0.9504127758958696 0.8810459275037148 0.8029817080655707 0.8062343756323331 0.814565850906666 0.8079395897843784 0.684094738847038 0.8417433091898224 1.0371746461460165 1.0 14.692406110187392 -10.391115375163583 0.967852732410783 0.991304183881338 0.834871366326292 0.4946281436769835 0.06967548607916896 0.39349643098424114 0.7099487089022254 0.0369418752855188 0.013787116510099373 4.063353673116563e-11 10.391115375163583 -0.156432817555046 ES(ph)KSSPRPTAEK ddPTM_A549_PD325901_60min_R1 2 ESKSSPRPTAEK 12 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ES(0.389)KS(0.305)S(0.305)PRPTAEK;ES(0.497)KS(0.293)S(0.21)PRPTAEK 81.311 0.00024458 68693000.0 5277.9 6005.6 5667.1 5871.9 7063.9 6264.5 5994.1 6923.4 6562.3 6628.1 6298.1 True False 5813.708522615378 6511.712988655034 6051.703485040701 6234.593926947532 6567.756033132048 6213.483988988357 6222.208755597377 6785.307355697771 6286.509352012971 6209.600634841379 5523.4736269453315 1.0525457194643213 1.1789162813937852 1.0956336345155138 1.1287451245413973 1.189062621950861 1.124923265438786 1.126502845101565 1.2284493081666574 1.1381441782115695 1.1242202016768748 1.0 12.431360125623234 -10.460944849095908 0.8598055676111529 1.0023470233411478 1.141910384225459 0.09577837489756824 0.05707307759765355 0.31538742994578584 0.4305271455042415 0.02632892244393595 0.008236540897193306 3.45983311335996e-11 10.460944849095908 0.1395633608843112 ES(ph)PEGSYTDDANQEVR ddPTM_A549_MK2206_60min_R1 2 ESPEGSYTDDANQEVR 16 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 ES(0.946)PEGS(0.027)YT(0.027)DDANQEVR;ES(0.566)PEGS(0.152)Y(0.13)T(0.152)DDANQEVR 102.64 1.1194e-06 11208300.0 0.0 157.38 330.26 431.84000000000003 720.19 399.73 138.99 500.38 653.21 517.39 414.36 True False 0.0 165.38996977566973 377.0958340824019 537.6408193860347 614.2510050299239 442.0291632807009 164.24268388429905 571.3103973494814 505.25897796202554 400.5112396570389 311.4629762457764 0.0 0.5310100473873337 1.210724429040434 1.7261789053276773 1.9721477410696047 1.4192029133244213 0.5273265088005022 1.834280286651658 1.6222120010929455 1.2859032058468298 1.0 8.282916869360564 -5.627657577236733 2.5001726485699507 1.3672249716393632 0.03760932978688975 0.5783344530744972 0.38609489563365457 0.1845417007720626 2.114350482163263 0.058771771349684004 0.3710560127232597 2.3569068725036384e-06 5.627657577236733 -1.3296156418524734 ES(ph)PEGSYTDDANQEVR ddPTM_A549_PD325901_60min_R1 2 ESPEGSYTDDANQEVR 16 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 ES(1)PEGSYTDDANQEVR;ES(0.964)PEGS(0.035)YTDDANQEVR 133.66 3.1362e-10 9177900.0 665.14 408.36 534.4300000000001 887.92 640.53 830.27 459.71 563.08 794.3100000000001 862.88 663.11 True False 732.6645231498115 442.7739303395447 570.6996335886614 942.7648017873684 595.5413825085399 823.5085563951412 477.2045156129643 551.8489276722856 760.9279129874312 808.3976095399778 581.5516738006258 1.2598442342390916 0.7613664447836177 0.9813395082486086 1.6211195741662978 1.024055830871377 1.4160539699133696 0.8205711325603802 0.9489250096483718 1.3084441972534004 1.3900701278303291 1.0 9.183763577902724 -11.278690812932352 1.817565714300356 0.999639832202707 1.150546583741946 0.0 0.2732765577684712 1.0535046696241184 6.282591140432751 0.1844497776042413 0.03685879782355046 5.263918869533704e-12 11.278690812932352 0.15090675153923894 ES(ph)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_MK2206_60min_R1 2 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 40 1 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ES(1)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR;ES(0.998)PRPLQLPGAEGPAIS(0.002)DGEEGGGEPGAGGGAAGAAGAGR 200.77 2.1059999999999993e-98 33708000.0 1174.2 1450.3899999999999 1560.58 1356.8000000000002 2273.55 1432.26 1462.66 1839.1 2298.1 1633.5900000000001 2154.2 True False 1372.3762535662186 1524.2086558834271 1781.8937102655914 1689.2160609090668 1939.1138067534725 1583.8208025427575 1728.4063890222942 2099.798057007536 1777.5840193115991 1264.5608844224714 1619.2526871045736 0.8475368078716602 0.9413037681036076 1.1004420276441476 1.0432071994455643 1.197536259903234 0.9781183722318394 1.067409924829522 1.2967698455774914 1.0977804968106255 0.7809533956578849 1.0 10.661112422857743 -5.572076101258214 3.216255219303815 1.0732437056402322 0.8573234882589744 0.22495010996121623 0.12367974881952402 0.19280747450498945 3.8373469751481477 0.012668986728205137 0.0717298491511307 2.678698896294357e-06 5.572076101258214 -0.21592021738125777 ES(ph)PSLASR ddPTM_A549_MK2206_60min_R1 2 ESPSLASR 8 0 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 ES(0.999)PS(0.001)LASR;ES(0.999)PS(0.001)LASR 147.41 0.00077666 57731000.0 3307.1 3845.9 3530.8 2934.6 4639.1 3503.2 3788.2 4081.0 5228.7 4493.2 4142.0 True False 3865.2576291678097 4041.639882832942 4031.5205322417005 3653.5771317392014 3956.694535378612 3873.9062987640405 4476.466904744953 4659.494247538338 4044.4077985181516 3478.1829993370734 3113.4270866155166 1.2414800544982663 1.2981321773064063 1.2948819484397198 1.1734905074365691 1.2708486260649123 1.2442579161136582 1.4377940385978794 1.496580494070118 1.2990212026820476 1.1171557587745113 1.0 11.604287777781257 -10.448550758657484 0.9174388277314964 1.0102123354714474 1.30503073967554 0.5068931499794251 0.0917910831121667 0.29693398546304145 0.47075563010089183 0.053073591398855625 0.017847040156414074 3.559993797752802e-11 10.448550758657484 0.29481840420409267 ES(ph)PSLASR ddPTM_A549_PD325901_60min_R1 1 ESPSLASR 8 0 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 ES(0.997)PS(0.003)LASR 107.08 0.0018562000000000001 35492000.0 984.57 1066.4 1048.7 1294.8 1138.9 975.15 901.27 999.77 1204.8 1335.1 1347.1 True False 1084.5228215978746 1156.2692705311258 1119.8710883453944 1374.7768552958432 1058.9075929917035 967.2087017099525 935.5683230438673 979.8288030456082 1154.166445804859 1250.8015581504078 1181.4152399704767 0.9179861448418225 0.9787153842369772 0.9479064180460205 1.1636694777445047 0.8963043282039982 0.8186864947959558 0.791904735431758 0.8293686841809268 0.9769354641418891 1.0587315245583466 1.0 10.206300412272014 -4.189729097793252 15.644260386812308 0.9565410783591693 0.9377040886125667 0.0 0.10600716339369413 0.0 0.0 0.014111282390325153 0.0 6.460570978853759e-05 4.189729097793252 -0.01883698974660264 ES(ph)PSPAPKPR ddPTM_A549_MK2206_60min_R1 1 ESPSPAPKPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 ES(0.991)PS(0.009)PAPKPR 100.93 0.00012225 15891000.0 3456.5 4022.3 3103.8 2977.0 4711.3 3830.2 3574.1 3701.0 5220.0 5062.9 4993.6 True False 4039.872696688496 4227.017889367622 3543.9655114908205 3706.3651336426087 4018.2740110213704 4235.509221719009 4223.467706100246 4225.628083837143 4037.678334627106 3919.1873736632415 3753.551303651192 1.0762801330992307 1.1261383014149493 0.9441633335458873 0.9874289263176758 1.070525932897913 1.1284005143606275 1.125192481581896 1.125768037252281 1.0756955235164989 1.0441278289844953 1.0 11.874040486592593 ES(ph)PSPAPKPR ddPTM_A549_PD325901_60min_R1 2 ESPSPAPKPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 ES(0.999)PS(0.001)PAPKPR;ES(0.993)PS(0.007)PAPKPR 128.28 4.1141000000000006e-07 42971000.0 11293.8 10406.6 10505.8 10267.9 11165.3 9902.4 10448.900000000001 10092.7 11243.9 12723.5 12289.599999999999 True False 12440.338261943867 11283.600703965874 11218.78676450753 10902.12486290716 10381.087846193926 9821.758137530258 10846.538607357472 9891.393180930021 10771.35798471551 11920.136038593902 10778.057110193124 1.1542282746097787 1.0469048909839829 1.0408913823529098 1.011511142634112 0.9631687548191064 0.911273528903603 1.0063537886712053 0.9177343448640146 0.9993784477657595 1.1059633398417124 1.0 13.395809515885396 -5.014192590796288 0.9538375013311329 0.9861086188566721 1.3080748891846508 0.48151640557767905 0.04988902933602644 1.3696798424213577 0.6912041554224708 0.005447456725543523 0.5066251722284261 9.678485621554479e-06 5.014192590796288 0.32196627032797864 ES(ph)QHIPTAEGASGSNTEEEIR ddPTM_A549_MK2206_60min_R1 1 ESQHIPTAEGASGSNTEEEIR 21 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ES(0.951)QHIPT(0.049)AEGASGSNTEEEIR 40.454 0.028319999999999998 1098700.0 282.82 302.0 337.07 447.86 341.7 221.42 348.36 238.73 669.28 700.78 687.55 True False 330.553101714868 317.370510053706 384.8715944836041 557.5857201051991 291.43638264725286 244.8505174332993 411.65250275512204 272.5707085799628 517.6891486205423 542.4733112871528 516.812359585345 0.6395998384792524 0.614092337707137 0.7447027675429412 1.0788939346430644 0.5639114027402161 0.4737706304658632 0.7965221711907275 0.5274074884715507 1.0016965326369143 1.0496523568484244 1.0 9.013496762320624 -8.78070418399516 24.905595207830046 1.0008012014628975 0.6862865105463338 0.4825802110505024 0.15517313557952164 146.53034889223449 189434.07944893852 0.02679717734873662 0.028547303486372348 1.6568981613317897e-09 8.78070418399516 -0.3145146909165637 ES(ph)REERLSPR ddPTM_A549_PD325901_60min_R1 1 ESREERLSPR 10 2 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 ES(0.538)REERLS(0.462)PR 57.802 0.0040923 25199000.0 2001.2 2057.3 1848.3 1875.0 2276.1 2617.4 2127.7 2141.2 2661.1 2531.0 2404.1 True False 2204.3603507944235 2230.675891094978 1973.7367527308015 1990.8144915660373 2116.234588118726 2596.0847621962034 2208.670787822114 2098.492086261094 2549.2632212245253 2371.1922280568383 2108.4109408455356 1.0455079264151463 1.0579891461767934 0.9361252659499454 0.9442250810781988 1.0037106842511703 1.2312992272536283 1.047552327221548 0.9952955781094249 1.2090921991716637 1.1246347579214893 1.0 11.041940368212234 -7.038270504774098 24.971993507727824 1.0972791824808257 0.9933494670537653 0.30707577639979167 0.07753891289288345 634.4542633980121 413988.3829610002 0.01384647629427412 0.02398654762238203 9.156499904781412e-08 7.038270504774098 -0.10392971542706042 ES(ph)RPSEER ddPTM_A549_MK2206_60min_R1 1 ESRPSEER 8 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ES(0.891)RPS(0.109)EER 40.715 0.026799 37259000.0 185.12 225.54 210.21 207.27 0.0 0.0 0.0 0.0 0.0 287.81 358.66 True False 216.36373025053507 237.01902264077108 240.02093890408062 258.05115930470396 0.0 0.0 0.0 0.0 0.0 222.7935211072738 269.5948234875714 0.8025515009953805 0.8791675580955579 0.8903024761346943 0.9571814323675262 0.0 0.0 0.0 0.0 0.0 0.826401331543166 1.0 8.074648985254038 -11.026609030621879 1.3581472959017202 0.9952736261097017 0.3474792913535137 0.19070072395387083 0.402436832043301 0.5448875599561067 1.811795154652486 0.31614840366455066 0.07349720538279877 9.405696682292973e-12 11.026609030621879 -0.6477943347561881 ES(ph)RPSEER ddPTM_A549_PD325901_60min_R1 1 ESRPSEER 8 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ES(0.873)RPS(0.127)EER 56.358999999999995 0.0052826 112910000.0 331.24 271.18 354.63 302.53 337.24 242.33 398.51 433.8 231.78 546.02 404.21 True False 364.867240954 294.03329030629277 378.6973243634283 321.2165910045192 313.55342581484075 240.35654482425545 413.6755161230393 425.14751869048337 222.0390926366618 511.54420401564374 354.4947324983046 1.029259979076685 0.8294433269405463 1.0682734879995417 0.906125145332182 0.8845079970725386 0.6780257160109001 1.1669440423209045 1.1993056023548014 0.6263537149673267 1.443023427768677 1.0 8.469620380130817 -8.772292679010356 24.992534887991077 0.8235559595512003 0.9606325400536662 0.0 0.24779575747853644 385.0749816288341 886732.0695731373 0.03325480784852813 0.03557121122017665 1.6893020963040451e-09 8.772292679010356 0.13707658050246585 ES(ph)RQESDPEDDDVK ddPTM_A549_MK2206_60min_R1 1 ESRQESDPEDDDVK 14 1 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 ES(0.504)RQES(0.496)DPEDDDVK 63.128 0.0047824 2292500.0 604.4 602.09 503.78 620.87 689.43 670.85 503.56 632.36 975.55 641.46 963.82 True False 706.4079438387175 632.7338092656815 575.2235792830869 772.9831778719137 588.0157602823983 741.8389017258097 595.0503338137822 721.9989665212796 754.5894826332321 496.5537404866817 724.4768939212374 0.9750593148875715 0.8733664449131073 0.7939847138114845 1.0669535279284554 0.8116418414668244 1.0239648882528196 0.8213517074272267 0.9965797012703248 1.0415645950404437 0.6853962419685745 1.0 9.500795867746268 -8.496520817017798 21.780144086674575 1.0195984966593965 0.9102431621205538 0.0 0.13029668635467095 131.05135604101648 108290.54791903355 0.012216695267591084 0.014730756642113723 3.187712775541267e-09 8.496520817017798 -0.10935533453884272 ES(ph)RQESDPEDDDVKKPALQSSVVATSK ddPTM_A549_MK2206_60min_R1 4 ESRQESDPEDDDVKKPALQSSVVATSK 27 3 Q9H307 Q9H307 PNN Pinin 1 ES(0.566)RQES(0.434)DPEDDDVKKPALQSSVVATSK;ES(0.682)RQES(0.318)DPEDDDVKKPALQSSVVATSK;ES(0.554)RQES(0.446)DPEDDDVKKPALQSSVVATSK;ES(0.542)RQES(0.458)DPEDDDVKKPALQSSVVATSK 176.36 3.5095e-49 1465250000.0 12373.3 13467.9 14051.2 11468.4 14892.300000000001 11365.380000000001 10662.2 10983.72 16925.5 17722.8 19157.399999999998 True False 14461.610541859047 14153.35858394805 16043.871446310925 14278.158514836035 12701.662397710521 12568.056967871344 12599.383726247732 12540.69594623176 13091.901274469561 13719.207170980826 14400.088862657673 1.0042723124689121 0.9828660586012462 1.11415086388223 0.9915326669866721 0.8820544455561303 0.8727763479614937 0.8749518038684101 0.8708762887396 0.9091542003202143 0.9527168409743283 1.0 13.81379009408648 -6.531654713277655 17.778780262529622 0.9325726897614376 1.0327014575630744 0.5166885351909744 0.0510621294023037 5.013656530128927 10156.974292283237 0.00899357959744882 0.018802851868350602 2.939986165069643e-07 6.531654713277655 0.10012876780163682 ES(ph)RQESDPEDDDVKKPALQSSVVATSK ddPTM_A549_PD325901_60min_R1 1 ESRQESDPEDDDVKKPALQSSVVATSK 27 3 Q9H307 Q9H307 PNN Pinin 1 ES(0.558)RQES(0.442)DPEDDDVKKPALQSSVVATSK 87.20299999999999 3.2479000000000003e-09 292870000.0 1220.4 1506.5 1394.4 1817.4 1451.3 1615.4 1860.6 1767.3 2082.1 1569.9 1638.5 True False 1344.2941095890046 1633.458042062209 1489.0323692083705 1929.6566703851302 1349.3656947131967 1602.2447179841631 1931.4061511593864 1732.04981507997 1994.5965776977896 1470.7762460791896 1436.9748873072722 0.9355028549650295 1.1367338820535158 1.0362271340723623 1.3428603989044567 0.9390322034379841 1.1150123305123223 1.3440778737467167 1.2053445264625569 1.3880524950825253 1.02352258141077 1.0 10.488819134019035 -7.542709617475668 24.88103066327046 1.2021227645619483 1.0870467369777725 0.11654355060170307 0.14858393991629845 438.5953477034961 550286.7385316124 0.02617098977523921 0.03882026065888507 2.8660936869559226e-08 7.542709617475668 -0.11507602758417579 ES(ph)SETPDQFMTADETR ddPTM_A549_MK2206_60min_R1 1 ESSETPDQFMTADETR 16 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 ES(0.539)S(0.422)ET(0.039)PDQFMTADETR 84.75299999999999 3.6044e-05 2115500.0 738.89 1163.4 783.81 837.9 1452.6 1114.4 724.38 1271.0 1595.2 1456.8 1234.1 True False 863.596567873908 1222.6120907168274 894.9660440626395 1043.1855376147598 1238.924464247584 1232.3250683211484 855.9904694734043 1451.168142274253 1233.8897470109507 1127.7078682084589 927.6389105727208 0.9309619918171897 1.3179827590047848 0.9647784648340062 1.1245599184392783 1.3355675900687227 1.3284534038792266 0.9227625746584078 1.564367477188195 1.330140136369605 1.2156754695770753 1.0 9.857419526051169 -5.238703154291953 22.108199059458357 1.1852879359878323 0.9309606334932045 0.14484916617404653 0.186318066549508 1939.475036089319 1885755.691450822 0.026668550016591745 1.531588853707718 5.771608252411425e-06 5.238703154291953 -0.25432730249462787 ES(ph)SKVDANEEVEALIVK ddPTM_A549_MK2206_60min_R1 1 ESSKVDANEEVEALIVK 17 1 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 ES(0.576)S(0.424)KVDANEEVEALIVK 257.86 5.318099999999999e-87 9941400.0 3119.9 3658.8 3957.4 3934.8 5155.6 4114.1 3736.6 3999.3 5521.5 5389.1 5605.8 True False 3646.4628457683903 3845.0172920016557 4518.618826977825 4898.826176639882 4397.2180695820225 4549.451331281441 4415.491852666178 4566.213022342583 4270.889066023672 4171.698567107503 4213.725147790743 0.8653774790413731 0.9124983612226344 1.0723572773480343 1.1625879725943533 1.043546485676097 1.0796744381077439 1.0478832144477248 1.0836523176497759 1.0135661240892515 0.9900262643601054 1.0 12.040880497998293 -5.6463157737882 4.923629711987354 1.0353732713632602 0.8771023623128443 0.6176016429381749 0.04882835605180108 0.11697878882660635 4.420177224886975 0.007648971937374007 0.031727858969211695 2.2577935405723936e-06 5.6463157737882 -0.15827090905041585 ES(ph)SKVDANEEVEALIVK ddPTM_A549_PD325901_60min_R1 1 ESSKVDANEEVEALIVK 17 1 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 ES(0.5)S(0.5)KVDANEEVEALIVK 193.64 5.929099999999999e-41 15389000.0 3013.1 2977.1 2701.6 2829.8 3614.2 2871.3 3412.9 3433.9 3223.3 3014.1 3686.8 True False 3318.9876938730145 3227.9906651333567 2884.9468220405433 3004.5903190579056 3360.3510603131203 2847.9170847764813 3542.7797771105384 3365.4081706575635 3087.8359103276903 2823.789211610475 3233.346972550776 1.026486709298222 0.9983434170650749 0.8922478306634128 0.9292508179806 1.0392794490787827 0.880795382912391 1.095700463694947 1.0408434972268394 0.9549967685316826 0.8733331855760588 1.0 11.65881261696952 ES(ph)SKVPR ddPTM_A549_MK2206_60min_R1 1 ESSKVPR 7 1 E5RJ29;Q9NYI0-2;Q9NYI0 E5RJ29 PSD3 PH and SEC7 domain-containing protein 3 1 ES(0.5)S(0.5)KVPR 43.083 0.025705000000000002 187060000.0 2422.1 2530.2 2012.5 1434.4 2480.1 1733.1 1533.7 1532.4 2524.3 3194.6 3316.8 True False 2830.891265340435 2658.97637264201 2297.902761735703 1785.828064392662 2115.280575368604 1916.4954916613283 1812.3534374656401 1749.622392778179 1952.5500804787744 2472.9376412539427 2493.147020976907 1.1354690443531035 1.0665140684724341 0.9216876270839816 0.7162947268520526 0.8484379611675524 0.7687053653620374 0.7269340404784846 0.7017726504121736 0.7831668425689927 0.9918940280886263 1.0 11.283752245782798 -5.784897750809059 2.9872295748260127 0.8462950184221486 1.1182812381271918 0.5354207511438751 0.09929140165978907 0.18848101912438067 3.350319422237676 0.016774877856730736 0.07253312840771811 1.6409760749664568e-06 5.784897750809059 0.2719862197050432 ES(ph)SLSR ddPTM_A549_MK2206_60min_R1 1 ESSLSR 6 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2R8Y4Z5 Q3V6T2 CCDC88A Girdin 1 ES(0.922)S(0.078)LSR 77.923 0.044334 5691900.0 2147.7 1990.4 1898.5 1220.1 2773.7 2248.8 1753.7 2353.4 2357.8 3388.4 2799.5 True False 2510.1792537763313 2091.702858314227 2167.7358475305505 1519.0245547723707 2365.692404298172 2486.766523367373 2072.324589739515 2687.0016569852305 1823.7620646329103 2622.9580866539964 2104.306887730597 1.1928769840616975 0.9940103653654991 1.030142447458488 0.7218645548466424 1.1242145421333805 1.181750883327309 0.9848015048672043 1.2769057938516966 0.8666806516038914 1.2464712737231698 1.0 11.039129404273737 ES(ph)SLSR ddPTM_A549_PD325901_60min_R1 2 ESSLSR 6 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2R8Y4Z5 Q3V6T2 CCDC88A Girdin 1 ES(0.922)S(0.078)LSR;ES(0.913)S(0.087)LSR 89.046 0.038161 19084100.0 6789.4 7390.6 6237.6 6513.4 7796.700000000001 6176.8 6281.8 6174.3 6690.8 8696.9 9188.099999999999 True False 7478.654889907886 8013.431799312953 6660.921045735891 6915.717924995323 7249.086689154809 6126.498188711513 6520.857336532859 6051.14874285535 6409.608943883753 8147.776249777763 8058.021948164745 0.928100585728882 0.9944663654258292 0.826619868819413 0.8582401449738435 0.8996111869372391 0.7602980269998959 0.8092379716113851 0.750947165666821 0.7954320533147188 1.0111385029961926 1.0 12.976210019717389 -4.28409792130968 16.57748783798622 0.87793767129398 0.8651592554933162 0.0 0.09230418045982787 0.0 0.0 0.013406051824861365 0.0 5.198787651359532e-05 4.28409792130968 -0.012778415800663856 ES(ph)SNPSDR ddPTM_A549_PD325901_60min_R1 1 ESSNPSDR 8 0 Q9Y388 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ES(0.5)S(0.5)NPSDR 166.66 3.469e-05 28783000.0 2697.9 2381.6 2508.0 2321.0 3049.9 2010.2 1813.0 2409.8 2502.5 2864.5 3009.5 True False 2971.788821910993 2582.3057902259284 2678.2079618291687 2464.3628986265458 2835.6855455838063 1993.829597679687 1881.9947071116678 2361.7346485484727 2397.3286276781705 2683.6349811413716 2639.35057879233 1.125954560864277 0.9783868088518566 1.014722327283486 0.9337004786056682 1.0743876044240064 0.7554243129732278 0.7130521887595545 0.8948165762917012 0.9083024615756427 1.0167785222262153 1.0 11.365967277877603 -4.709617974692796 0.7791046732988004 0.9258481457605272 1.4296376226580234 0.27041312091019754 0.10215287813970102 6.32288700387321 1.5116411858012022 0.01706878207182724 3.390067532477405 1.951560526920426e-05 4.709617974692796 0.5037894768974962 ES(ph)SNPSDRWR ddPTM_A549_PD325901_60min_R1 1 ESSNPSDRWR 10 1 Q9Y388 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ES(0.5)S(0.5)NPSDRWR 52.79 0.006266600000000001 10641000.0 5165.2 4344.4 4392.6 4174.9 4247.2 4159.3 3857.0 4114.9 5120.4 4770.8 6176.8 True False 5689.567301580734 4710.517834673125 4690.708250849601 4432.774091114164 3948.8913240445704 4125.428039811521 4003.7802456313843 4032.8250914233963 4905.20739467065 4469.570873810176 5417.092757961278 1.0502990359947246 0.8695656591352016 0.865908792858653 0.8182939242824481 0.7289687477182383 0.7615575778628766 0.7391012900318521 0.7444629936411038 0.9055055199971734 0.8250866421368606 1.0 12.403303079237899 -9.23848890008173 1.7274606484227617 0.9703376592768137 0.8186164630069488 0.058304639260688296 0.09866602830716265 0.2695194136187945 1.661646362264508 0.019900012401838092 0.017964379524133888 5.774456311732087e-10 9.23848890008173 -0.1517211962698649 ES(ph)SPAARPSPEK ddPTM_A549_MK2206_60min_R1 1 ESSPAARPSPEK 12 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ES(0.583)S(0.417)PAARPSPEK 56.147 0.004733 12374000.0 1961.0 1974.7 2128.3 2139.7 2708.1 1880.7 1977.6 1964.6 2803.8 3299.0 3072.6 True False 2291.9688581530872 2075.2037953743493 2430.124943007255 2663.926596054783 2309.7420773983768 2079.7144256923775 2336.904321530972 2243.088066335167 2168.7437767485594 2553.7536087449944 2309.5886205540405 0.9923710386152117 0.8985166349133357 1.0521895204109115 1.1534203850622289 1.0000664433670008 0.9004696365335749 1.0118270850201794 0.971206753606657 0.9390173459671384 1.105717956010877 1.0 11.173420189143433 -7.004249384696102 24.99870937437995 0.9687278499669915 1.0246053461065658 0.01430492979643394 0.07473677316794734 296.3431171190994 1743372.9089096438 0.009453203203494754 0.01756224017029207 9.902631433036032e-08 7.004249384696102 0.05587749613957438 ES(ph)SPEKEAEEGCPEKESEEGCPK ddPTM_A549_MK2206_60min_R1 2 ESSPEKEAEEGCPEKESEEGCPK 23 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.543)S(0.457)PEKEAEEGCPEKESEEGCPK;ES(0.552)S(0.448)PEKEAEEGCPEKESEEGCPK 176.97 1.8269000000000001e-41 378847000.0 7219.4 7959.0 6428.5 5209.0 8904.2 7206.6 6497.2 7168.4 9017.5 8381.5 8657.400000000001 True False 8437.858222616205 8364.079104362409 7340.157964630046 6485.205233840896 7594.403975322414 7969.197628646083 7677.65713888098 8184.542652304293 6975.050647988491 6488.113328795438 6507.528647915299 1.296630207739353 1.2852927058633632 1.1279486210147507 0.9965696018746603 1.1670181394829968 1.2246119932486248 1.1798115005364647 1.2577036683390137 1.0718432488534588 0.9970164834962224 1.0 12.667894042442356 -14.999999999999481 0.05241454803544769 0.20885702147273083 1.5362485886565302 0.42325536387951734 0.08382029809492329 247.4021153520384 0.9873957452378541 26.25916830572018 5.758039935486526 1.0000000000011944e-15 14.999999999999481 1.3273915671837995 ES(ph)SPEKEAEEGCPEKESEEGCPKR ddPTM_A549_MK2206_60min_R1 1 ESSPEKEAEEGCPEKESEEGCPKR 24 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.527)S(0.473)PEKEAEEGCPEKESEEGCPKR 60.747 0.00013042 8780400.0 1133.6 1324.8 1127.0 1216.1 1954.0 1021.7 911.97 864.83 1815.6 1870.1 1802.7 True False 1324.923966140917 1392.226661321688 1286.8255465719942 1514.0445545928035 1666.5691884481473 1129.8156158504282 1077.6631442691141 987.4223009307967 1404.3694989174273 1447.6431111591435 1355.0398380110553 0.9777749177364831 1.0274433431899803 0.9496588295594417 1.1173432043261085 1.2299042003771334 0.833787748638288 0.7952999712915613 0.7287035209091326 1.0364045834835223 1.0683398897585272 1.0 10.404119551928403 -7.279784531444028 24.983161755790295 0.9635970852565656 1.0556010756078238 0.20645433918591827 0.12439444213485933 1585.9637573984364 2159825.4779415885 0.020772399092632628 0.03324278051031801 5.2506790003500755e-08 7.279784531444028 0.09200399035125817 ES(ph)SPFLSPLEASR ddPTM_A549_MK2206_60min_R1 1 ESSPFLSPLEASR 13 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 ES(0.774)S(0.225)PFLS(0.001)PLEASR 80.96 0.00064472 1836100.0 1804.5 1834.9 1459.8 1787.8 2487.6 1827.5 1969.8 1808.2 2729.5 3043.6 2868.6 True False 2109.05548421073 1928.2885725084293 1666.8215908480902 2225.8110802573915 2121.6773353037947 2020.88483700368 2327.6871624958058 2064.517887380256 2111.27260811584 2356.048646127996 2156.2474506676162 0.9781138447527092 0.8942798155709789 0.7730196227395004 1.0322614315756 0.9839674637745691 0.9372230614709711 1.0795083661548717 0.9574587029614997 0.9791420773446705 1.092661533535271 1.0 11.074307035742233 -6.2878117682680275 24.999614795778296 0.9920352164112858 0.8830519253335954 0.419512040190853 0.06407380538668161 469.878483730647 445418.9293786154 0.007345358981168873 0.017074091375732806 5.154520031650255e-07 6.2878117682680275 -0.10898329107769034 ES(ph)SPIPS(ph)PTSDR ddPTM_A549_MK2206_60min_R1 1 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.715)S(0.285)PIPS(0.847)PT(0.151)S(0.002)DR 141.73 1.2481e-11 13302000.0 951.87 713.25 621.04 762.86 1211.0 1123.1 955.22 1250.8 1347.8 1641.8 1375.9 True False 1112.52238501284 749.5513784629335 709.1128105084928 949.7607342460866 1032.863504202 1241.9456965465563 1128.7711094320455 1428.1047304143472 1042.5254519943326 1270.9162397203781 1034.2260570918133 1.0757052361852026 0.7247461745168465 0.6856458562864669 0.9183299219096852 0.9986825386186413 1.2008454902391834 1.0914162350599517 1.3808438886466454 1.0080247397032875 1.2288572996256975 1.0 10.01433584342949 -6.6735102772989885 3.0485228422302715 1.055517373335604 0.8173155489932967 0.3875337509269092 0.15369398641372375 0.22793716217338267 4.251491292609074 0.021891205772483338 0.04833378076073771 2.1207512062859158e-07 6.6735102772989885 -0.2382018243423073 ES(ph)SPIPS(ph)PTSDRK ddPTM_A549_MK2206_60min_R1 1 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.5)S(0.5)PIPS(0.978)PT(0.012)S(0.01)DRK 85.42 0.00049387 10541000.0 1640.4 1616.4 1463.2 1564.7 1985.5 1437.4 1651.4 1608.2 2115.0 2252.6 2848.3 True False 1917.2594160705362 1698.6678557973858 1670.703761973506 1948.0515702420516 1693.4355801759461 1589.504713931102 1951.438003932163 1836.1672749059423 1635.955876960982 1743.7360955013555 2140.9885009191157 0.8955019680149923 0.7934035400321655 0.7803422396973553 0.9098841817252932 0.7909596802827118 0.7424162779243025 0.9114658967548963 0.8576259396618361 0.7641124070767659 0.8144537416958467 1.0 11.064061331804698 -10.90371281660312 1.0747912167000335 1.003257314262988 0.8221876546625976 0.0 0.07822177335676184 0.31105815134888276 0.6189258253794365 0.04362846304863148 0.009648713119183389 1.2482086370973629e-11 10.90371281660312 -0.18106965960039034 ES(ph)SPIPSPTSDR ddPTM_A549_PD325901_60min_R1 1 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ES(0.563)S(0.437)PIPSPTSDR 89.54799999999999 0.00027481 7828400.0 504.26 749.94 696.58 537.02 511.03 511.42 578.15 452.82 516.78 880.6 922.39 True False 555.4521039834083 813.1400757146594 743.8541076758224 570.19050573909 475.1370157577926 507.2551650807606 600.1518146258192 443.78814986958207 495.06153375085916 824.9987657158634 808.9418775119648 0.6866403130120962 1.0051897402265868 0.919539621268798 0.7048596711210028 0.5873561858599229 0.6270600882240245 0.7418973245292799 0.5486032584127383 0.6119865314347468 1.0198492483208859 1.0 9.659892238489803 -4.977408263307372 19.048212409058188 0.776370025454759 0.4449771311403539 0.022125723712077994 0.17198570571527125 99470482.53210367 1914882396.4102793 0.026321209541224886 1030291029.5456525 1.0533961741278195e-05 4.977408263307372 -0.33139289431440505 ES(ph)SPIPSPTSDRK ddPTM_A549_PD325901_60min_R1 1 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ES(0.909)S(0.09)PIPSPTSDRK 88.73 7.9511e-05 29336000.0 4824.7 5052.6 5207.1 5627.9 6548.8 5260.7 5080.6 6093.5 5518.1 5881.7 7108.9 True False 5314.499992243584 5478.40033410124 5560.48511883599 5975.522601111739 6088.8348801335205 5217.858603379525 5273.945013211 5971.960362241723 5286.193446709656 5510.328458222795 6234.550367030002 0.8524271486117274 0.878716188271172 0.8918822996829646 0.9584528553513543 0.9766277472603213 0.8369262089810006 0.8459222722942548 0.9578814847375479 0.8478868780440824 0.8838373473350878 1.0 12.606069801950898 -10.958691554004757 1.179143040344776 1.0009638657583453 0.8920990015720737 0.0 0.058112943704645356 0.4069613531460952 0.9910721233566582 0.03647502042710933 0.008160748551334758 1.0997866560665792e-11 10.958691554004757 -0.10886486418627161 ES(ph)SPKKEETVAR ddPTM_A549_MK2206_60min_R1 3 ESSPKKEETVAR 12 2 Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 Q68DK7 MSL1 Male-specific lethal 1 homolog 1 ES(0.746)S(0.25)PKKEET(0.004)VAR;ES(0.753)S(0.246)PKKEET(0.001)VAR;ES(0.842)S(0.158)PKKEETVAR 55.885 0.0057547 134248000.0 11119.2 13940.7 12727.6 10198.5 15380.8 12098.0 11950.5 11320.1 16789.1 18203.0 16717.7 True False 12995.84912166028 14650.222084455965 14532.565063486883 12697.132957828055 13118.304694822551 13378.20232999755 14121.751160222431 12924.758841352297 12986.395656683517 14090.929657467452 12566.23370495225 1.0341880810746598 1.1658403327866194 1.1564773825398231 1.0104167450605521 1.0439328921324083 1.064615114131238 1.1237854946671224 1.028530834681099 1.0334357900383218 1.1213327706864413 1.0 13.617264696024185 -7.963152593051308 0.230869491435875 0.9856822345620244 1.1319791329110553 0.0 0.05986770293569644 2.1732019896992547 0.3485627269790579 0.06510852472738105 0.11122627580156749 1.0885475557131675e-08 7.963152593051308 0.14629689834903092 ES(ph)SPKKEETVAR ddPTM_A549_PD325901_60min_R1 2 ESSPKKEETVAR 12 2 Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 Q68DK7 MSL1 Male-specific lethal 1 homolog 1 ES(0.5)S(0.5)PKKEETVAR;ES(0.5)S(0.5)PKKEET(0.001)VAR 65.467 0.0019276 138097000.0 10684.0 10842.8 12677.099999999999 11577.400000000001 14291.2 12208.4 11035.2 13159.7 12074.2 12200.8 14161.400000000001 True False 11768.631814854907 11756.560808809914 13537.444239595116 12292.509703816886 13287.435413963503 12108.978838082114 11455.150574693147 12897.219459915068 11566.76336316154 11430.43940579844 12419.637576510959 0.9475825475867922 0.9466106185775413 1.0900031628296663 0.9897639627637358 1.0698730403448966 0.9749864892179794 0.9223417756052779 1.038453769722504 0.9313285747595047 0.9203520904198225 1.0 13.600335453735921 -7.491474832635796 24.89114881229839 0.9691757125679991 1.0101368661153756 0.14799227646316582 0.05228407841820173 1047.8240586231223 830519.6351617153 0.007637907096774004 0.012202241776218025 3.224966200685175e-08 7.491474832635796 0.040961153547376505 ES(ph)SPKKEETVASK ddPTM_A549_MK2206_60min_R1 2 ESSPKKEETVASK 13 2 J3QQY0 J3QQY0 MSL1 1 ES(0.547)S(0.453)PKKEETVASK;ES(0.5)S(0.5)PKKEETVASK 81.428 0.00012503 41900700.0 7424.6 7695.8 7994.5 6517.7 9651.4 7793.599999999999 7644.0 7276.099999999999 10118.2 10423.3 10407.4 True False 8677.690965957883 8087.483348580505 9128.240312395572 8114.536792590674 8231.691845132267 8618.313579027013 9032.815854461336 8307.509457121705 7826.443855445209 8068.669290703758 7822.9553503723655 1.1092599378756307 1.0338143305644136 1.1668531780589897 1.0372725433239791 1.052248348156614 1.1016697901282013 1.1546551718502882 1.0619400322572818 1.0004459318654653 1.0314093497056323 1.0 12.933498015450715 -8.65784193941883 4.006788131481944 1.0001102420846748 1.0917146079371305 0.42518018804020363 0.04155239072608142 0.12640664056611542 3.782156145588318 0.006639889597298436 0.0074942455338621655 2.198659924933353e-09 8.65784193941883 0.09160436585245568 ES(ph)SPKKEETVASK ddPTM_A549_PD325901_60min_R1 2 ESSPKKEETVASK 13 2 J3QQY0 J3QQY0 MSL1 1 ES(0.846)S(0.154)PKKEETVASK;ES(0.5)S(0.5)PKKEETVASK 92.977 3.637e-05 131339000.0 14555.4 14352.2 13594.9 14625.7 18065.0 12524.7 14115.1 13752.5 13576.9 14769.2 15575.699999999999 True False 16033.053492880848 15561.710263050289 14517.531666774854 15529.09627162529 16796.17672086674 12422.702995751055 14652.2578545791 13478.19559887246 13006.310107941561 13836.670191472556 13659.98764249733 1.1737238650934587 1.1392184729828412 1.0627778038107176 1.1368309165458548 1.2295894520879707 0.9094227111233262 1.0726406376089783 0.9866916392325789 0.952146550080168 1.0129343125044676 1.0 13.737668558044518 -7.264717019613519 24.999999999990543 0.9813382320095726 1.142513818387349 0.6915681030052832 0.052822682087513104 120.78535509241219 921281.6400092274 0.00765281721385509 0.012546529783160293 5.4360442137838664e-08 7.264717019613519 0.1611755863777763 ES(ph)SPKKEETVASKA ddPTM_A549_PD325901_60min_R1 1 ESSPKKEETVASKA 14 3 J3QQY0 J3QQY0 MSL1 1 ES(0.5)S(0.5)PKKEETVASKA 88.264 2.2705e-05 50851000.0 11718.0 10500.0 11381.0 11874.0 12583.0 13054.0 12807.0 13694.0 13404.0 14152.0 14482.0 True False 12907.60273366434 11384.8718497532 12153.38309951266 12607.430012189401 11699.21348899342 12947.692552039905 13294.377393259303 13420.86242726482 12840.676493665605 13258.440304804564 12700.8058089618 1.0162821893203517 0.8963897268407911 0.9568985844140003 0.9926480415355604 0.9211394666579621 1.0194386676555514 1.046734954712769 1.0566937743268967 1.0110127409872773 1.0439054422396798 1.0 13.632632411957399 -7.2802894886577345 24.691354553411024 1.0139637573438756 0.955333909628299 0.4860656538481747 0.03539792377055883 516.852833749461 677013.4880818219 0.005060351039681145 0.008097834460590767 5.24457754715742e-08 7.2802894886577345 -0.058629847715576555 ES(ph)SPLYSPTFSDSTSAVK ddPTM_A549_MK2206_60min_R1 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.463)S(0.402)PLY(0.121)S(0.015)PTFSDSTSAVK 87.156 2.3899e-06 11224000.0 1529.5 1837.4 1830.5 1691.1 2620.9 2521.0 2974.4 2333.8 2962.5 2776.4 2934.8 True False 1787.64220731522 1930.9158118300643 2090.0924250222142 2105.419575916363 2235.3690818852365 2787.7705466956354 3514.8099787427814 2664.623296962746 2291.4984801403834 2149.2093117064564 2206.008163640564 0.8103515829085072 0.8752985794229718 0.9474545287144113 0.9544024408512614 1.013309523839757 1.2637172394208152 1.5932896517220083 1.207893670060283 1.0387533998780563 0.9742526556019754 1.0 11.107222414495265 -6.614354607738243 1.966532220886812 1.0972610614207796 0.8755105389398747 0.32291936334129967 0.17217015317055756 0.4404932288070511 3.4207584535198627 0.02958059094748568 0.07517174637329141 2.430218889802669e-07 6.614354607738243 -0.22175052248090488 ES(ph)SPLYSPTFSDSTSAVKEK ddPTM_A549_MK2206_60min_R1 1 ESSPLYSPTFSDSTSAVKEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.5)S(0.5)PLYSPTFSDSTSAVKEK 157.88 2.4465e-27 14093000.0 2040.1 2919.6 3771.6 2798.5 5062.1 3247.6 2239.5 1993.0 5698.2 5558.8 4930.2 True False 2384.4190043437584 3068.1951693801348 4306.469593124162 3484.1326256294387 4317.471795723321 3591.2588764175916 2646.388161442461 2275.5138533065187 4407.56679815559 4303.063219245732 3705.8952734021773 0.643412408725397 0.8279227940954184 1.1620591720528117 0.940159494153986 1.1650280100224442 0.9690664769165632 0.7141022522778844 0.614025406934259 1.189339275124536 1.1611399950045886 1.0 11.855606396821074 -8.822350705779812 24.999999999921908 1.089410193580053 0.896180848291159 0.2503298142603265 0.1795596735411057 89.70876301151108 36818.75247491313 0.03334851880160182 0.03550220722306045 1.5053909270327618e-09 8.822350705779812 -0.19322934528889413 ES(ph)SPLYSPTFSDSTSAVKEK ddPTM_A549_PD325901_60min_R1 1 ESSPLYSPTFSDSTSAVKEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.5)S(0.5)PLYSPTFSDSTSAVKEK 156.23 2.8680999999999996e-27 20112000.0 1977.3 2384.9 3202.1 3408.5 3048.1 5121.2 4156.5 4295.8 3826.5 3286.2 3609.6 True False 2178.0340403886744 2585.8838928072787 3419.413761791536 3619.035303734851 2834.0119713741447 5079.494645128446 4314.677882024071 4210.116899010092 3665.6855120121954 3078.7087711735976 3165.642083139658 0.6880228349215392 0.8168592105152394 1.0801643622326973 1.143223146738535 0.8952408064285633 1.604570103544569 1.3629708503700482 1.3299409056486047 1.1579595594637149 0.9725384899230803 1.0 11.628282433987707 -5.664215538034634 1.8209047216439376 1.1451202236649962 0.6633550847468764 0.4189146933795065 0.1923095788025216 0.3732628017894206 2.0579067262747395 0.02902105320114578 0.23455710367152724 2.1666285517537438e-06 5.664215538034634 -0.4817651389181198 ES(ph)SPNSR ddPTM_A549_MK2206_60min_R1 1 ESSPNSR 7 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 ES(0.494)S(0.494)PNS(0.011)R 48.283 0.057425 2238100.0 389.23 320.57 277.97 141.33 135.45 0.0 0.0 0.0 76.689 302.67 595.9 True False 454.9225082401458 336.88564373482313 317.39032580356434 175.95585634454483 115.52548442953001 0.0 0.0 0.0 59.31906394716822 234.29663678655567 447.92158399666516 1.0156297988165999 0.7521085291958856 0.7085845762813863 0.39282736673358176 0.25791452914309687 0.0 0.0 0.0 0.1324318051786713 0.5230751210870429 1.0 8.80710237678702 -10.854867356456054 1.1479374818914556 0.9934311482123042 0.3358741508331384 0.11120165271979765 0.35181759107183663 0.47341623535212485 1.1248445287529636 0.24116610760410442 0.06122582970799221 1.396794909270977e-11 10.854867356456054 -0.6575569973791657 ES(ph)SPNSR ddPTM_A549_PD325901_60min_R1 1 ESSPNSR 7 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 ES(0.5)S(0.5)PNSR 60.91 0.028428 4803300.0 370.37 653.76 300.9 475.51 606.29 268.99 339.03 378.96 164.47 552.87 877.19 True False 407.9696897480166 708.8546495709196 321.32088345869073 504.88117273843585 563.7062819869525 266.79943462335035 351.93197217433465 371.40134551163106 157.55789785983157 517.9616938466154 769.3011909655577 0.5303120475297455 0.9214266894364599 0.4176789107207772 0.6562854427727512 0.732751084499738 0.3468075153874228 0.45746968327531284 0.4827775517225984 0.2048065175384417 0.6732885636073388 1.0 9.587404731576868 -11.059914813225411 1.3901277386941866 0.9981592830070988 0.4970344795621175 0.18835574957991863 0.2067084084261414 0.31682493979079274 1.0988546998830022 0.14608651145790044 0.03294528554124242 8.711344460438412e-12 11.059914813225411 -0.5011248034449813 ES(ph)SPPREEAPPPPPPTEDSCAK ddPTM_A549_MK2206_60min_R1 1 ESSPPREEAPPPPPPTEDSCAK 22 1 C9JR56;Q9UPW6-2;Q9UPW6 C9JR56 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 1 ES(0.5)S(0.5)PPREEAPPPPPPTEDSCAK 80.359 2.9948000000000002e-05 5383700.0 967.71 723.23 886.32 1098.2 996.31 822.52 687.34 681.72 1154.8 1453.7 1226.4 True False 1131.0357897620204 760.039317834907 1012.0135034939568 1367.2590493000712 849.7541188038766 909.5585204554125 812.2207809269304 778.3558976799403 893.2396438366628 1125.3081603615024 921.8510330819098 1.2269181778543645 0.824470864119946 1.0978059004941592 1.4831670196529305 0.9217911444574721 0.9866654023422837 0.8810759567210482 0.8443402130578082 0.9689631098534499 1.2207049946013508 1.0 9.848389826332161 ES(ph)T(ph)ESSNTTIEDEDVKAR ddPTM_A549_PD325901_60min_R1 1 ESTESSNTTIEDEDVKAR 18 1 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 2 ES(0.372)T(0.349)ES(0.32)S(0.32)NT(0.32)T(0.32)IEDEDVKAR 40.856 0.050954 3633300.0 1056.0 1213.4 1173.0 1290.2 1188.3 1025.5 1145.7 1204.0 1458.8 1521.4 1495.6 True False 1163.2043426138882 1315.6574764276704 1252.6068338220157 1369.8927237432006 1104.8379074124516 1017.1486680034415 1189.3002404510958 1179.9852754802716 1397.4917091136515 1425.3385443562515 1311.6506813895362 0.8868247919343991 1.0030547729627903 0.9549850822286231 1.0444036229920333 0.8423263320703716 0.7754722217091328 0.9067202551148567 0.8996185434297332 1.0654450372664597 1.0866754118148871 1.0 10.357167837447081 -8.755782949964102 24.964303516570425 1.030904602657287 0.9155726298759302 0.40828663636450857 0.07212041882094695 116.75105162275888 515273.0874639879 0.012963563842072201 0.014501221928749026 1.754757268609371e-09 8.755782949964102 -0.11533197278135676 ES(ph)TGYLEELEKER ddPTM_A549_MK2206_60min_R1 2 ESTGYLEELEKER 13 1 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7;E7EMH9 P25054-2 APC Adenomatous polyposis coli protein 1 ES(0.985)T(0.014)GY(0.001)LEELEKER;ES(0.928)T(0.071)GY(0.001)LEELEKER 82.90799999999999 0.00013795 4915700.0 1132.0 1117.19 1284.54 1105.54 2054.68 1432.4 1299.99 1647.47 2284.1 1820.01 1974.9899999999998 True False 1323.0539252571614 1174.0501990956952 1466.7070874832198 1376.397349629577 1752.4392938181368 1583.975617249834 1536.181355656881 1881.0039176652754 1766.754996958195 1408.8684769481592 1484.5454760489563 0.8912181853656672 0.7908482549287552 0.9879839392908242 0.927150681360594 1.1804551103965952 1.0669768240886133 1.0347822821469579 1.26705712153155 1.1900982660769175 0.9490234551101745 1.0 10.535805572709062 -6.3482194930560745 1.4778917075536724 1.1042897227723447 0.8501791225590376 0.4776468032888802 0.09792325280204886 0.2665182966497943 1.0930214049749678 0.014778961357650547 0.053847177082863164 4.4851865066934695e-07 6.3482194930560745 -0.2541106002133071 ES(ph)VASPR ddPTM_A549_MK2206_60min_R1 1 ESVASPR 7 0 O15018-2;O15018 O15018-2 PDZD2 PDZ domain-containing protein 2;Processed PDZ domain-containing protein 2 1 ES(0.845)VAS(0.155)PR 50.607 0.051777 3199100.0 1025.3 938.03 1098.5 917.13 1480.7 836.85 1024.7 964.42 1259.8 1189.9 1516.4 True False 1198.3455738217028 985.7717203499275 1254.2838180207054 1141.8268911715306 1262.8909914714295 925.4049115439284 1210.8747260683592 1101.1294884123797 974.4573114872079 921.1007635785598 1139.8360294890801 1.0513315449054974 0.8648364280885116 1.1004072389104294 1.001746621120007 1.1079584771833433 0.8118754694556652 1.0623236103627303 0.96604200948618 0.8549100802893539 0.8080993579325912 1.0 10.154610585844027 -7.245498960657356 24.962265332317727 0.936197294031746 1.019212835182576 0.22956686534006399 0.09485828531896368 1150.5830387090225 1801782.2536031238 0.01317924262109282 0.02278115716955946 5.681997513596494e-08 7.245498960657356 0.08301554115082999 ES(ph)VKGSPKESMEASPEAMVK ddPTM_A549_MK2206_60min_R1 1 ESVKGSPKESMEASPEAMVK 20 2 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.483)VKGS(0.483)PKES(0.028)MEAS(0.006)PEAMVK 60.99100000000001 0.00048668 3191700.0 1155.3 1607.1 1657.4 1552.7 1598.2 1068.2 947.56 1175.3 2201.4 1790.7 1999.5 True False 1350.2863956268536 1688.8945255208967 1892.444242137021 1933.1115697033515 1363.106897122739 1181.2362149862274 1119.7193865846916 1341.9023742052946 1702.7864149134325 1386.1796263048382 1502.968966607369 0.8984126922293254 1.1237055209018818 1.2591372704180375 1.2861952659388154 0.9069428094710839 0.7859351997484123 0.7450049944226185 0.8928343858185922 1.13294848579416 0.9222942436621576 1.0 10.553599505370874 -6.772718357272584 24.996101141333614 0.9963269181560541 1.148942522626224 0.25674762635883563 0.14914019324994748 320.9181050915554 711208.9322985947 0.02516172503514503 0.04785574407537351 1.6876471204535134e-07 6.772718357272584 0.15261560447016986 ES(ph)VKGSPKESMEASPEAMVK ddPTM_A549_PD325901_60min_R1 2 ESVKGSPKESMEASPEAMVK 20 2 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.41)VKGS(0.41)PKES(0.18)MEAS(0.001)PEAMVK;ES(0.544)VKGS(0.411)PKES(0.018)MEAS(0.026)PEAMVK 62.028 0.003296 13755000.0 2876.7 2968.4 4006.3 3635.3 4271.3 4400.7 4004.6000000000004 4261.8 4565.4 4371.8 4388.5 True False 3168.7404662853896 3218.5574856007042 4278.191609838992 3859.844224634678 3971.298623185057 4364.862158247436 4156.997244401205 4176.795055682579 4373.532114606159 4095.763801903947 3848.7423209935664 0.8233184250868133 0.8362621389446052 1.111581720216219 1.002884553632119 1.0318432079806923 1.1341009073116206 1.0800923776388494 1.085236346663064 1.1363535799084403 1.0641823900662206 1.0 11.910171368471497 -5.7541453253439 24.91999077861932 1.0687623210713042 0.829790127359345 0.8159074147738445 0.04432000092660164 59.050112510369814 201737.92501290902 0.00770657295801859 0.028658344069957254 1.7613865456271044e-06 5.7541453253439 -0.2389721937119592 ESAAPAAAPTAEAPPPSVVTRPEPQALPS(ph)PAIR ddPTM_A549_MK2206_60min_R1 2 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 ESAAPAAAPTAEAPPPSVVTRPEPQALPS(1)PAIR;ESAAPAAAPTAEAPPPS(0.016)VVT(0.012)RPEPQALPS(0.973)PAIR 157.45 3.1730999999999994e-51 121242000.0 2273.6 2583.0 2186.1 1839.4099999999999 3260.4 2760.3999999999996 1892.2600000000002 2825.1 3820.1 2716.5 4123.4 True False 2657.328095816858 2714.4636671149756 2496.1218521393394 2290.065532574252 2780.799479025763 3052.503695794778 2236.0591481898236 3225.566576505896 2954.8534494461696 2102.840763308813 3099.4459799493993 0.8573558348838333 0.8757899588104101 0.8053445255335892 0.7388628636823794 0.8971924327815392 0.9848546209682972 0.7214383353202785 1.04069133560397 0.953348910921948 0.6784569813161072 1.0 11.597794644222773 -8.191785190960962 0.7939956701681763 0.9867064658913447 0.8332500611290021 0.0 0.12320401803256159 0.4319410908551465 0.5460198708203043 0.01702634385730863 0.023963324250974295 6.43005679631732e-09 8.191785190960962 -0.15345640476234257 ESAAPAAAPTAEAPPPSVVTRPEPQALPS(ph)PAIR ddPTM_A549_PD325901_60min_R1 2 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 ESAAPAAAPTAEAPPPSVVTRPEPQALPS(1)PAIR;ESAAPAAAPTAEAPPPS(0.019)VVT(0.019)RPEPQALPS(0.962)PAIR 197.79 1.289e-88 208380000.0 7447.3 7151.4 7415.299999999999 7526.0 8179.9 8732.0 9370.0 9379.7 8659.4 9092.3 11041.9 True False 8203.344413587505 7754.073575840482 7918.546849821302 7990.863927213873 7605.372043123049 8660.889487085376 9726.580477460746 9192.614525267698 8295.47553187466 8518.210626298376 9683.81630037117 0.847118962105165 0.8007249761174503 0.8177093208095855 0.8251771491067619 0.7853693014428147 0.8943673876541228 1.0044160458814089 0.949276012692987 0.856632888787523 0.8796336446377945 1.0 13.24135999668613 -7.448130867503913 4.904668630402284 0.9375527885009608 0.8159446347398925 0.645744225678427 0.043443075650358834 0.1381337863733686 6.115596974099564 0.008461536703823047 0.013549423956714934 3.563437389175332e-08 7.448130867503913 -0.12160815376106826 ESAGADTRPTVRPR ddPTM_A549_MK2206_60min_R1 1 ESAGADTRPTVRPR 14 2 G3V194;E9PS48;O75489-2;O75489 G3V194 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial 0 90.926 2.2335999999999998e-05 5265300.0 911.27 962.33 710.83 807.94 1163.5 974.43 691.61 809.84 1000.5 1182.0 1266.9 False True 1065.070097587538 1011.3084865562355 811.6363826706041 1005.8853362698052 992.3506912791304 1077.5435358257155 817.2665846551549 924.6373000309843 773.8883474701953 914.9853790653472 952.2937653387734 1.1184259903336078 1.0619711305118835 0.8522962264505312 1.0562763013700578 1.0420636230103921 1.1315242995866777 0.8582084797797839 0.9709580527412669 0.8126571606765572 0.9608226078639148 1.0 9.895262877195842 -7.773646282647351 24.999080309072127 0.911051966441754 1.0363763721217665 0.34485387641395426 0.08377775471277281 220.12364746894386 450800.6428374872 0.014908409554355058 0.02067928982094868 1.684045097281606e-08 7.773646282647351 0.12532440568001246 ESAKQT(ph)PAPAASVTGSR ddPTM_A549_MK2206_60min_R1 2 ESAKQTPAPAASVTGSR 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ES(0.009)AKQT(0.991)PAPAASVTGSR;ES(0.002)AKQT(0.998)PAPAASVTGSR 114.87 6.439999999999999e-10 43058000.0 7022.2 6748.5 6390.5 6159.7 10074.2 6610.5 6575.4 6592.700000000001 11020.9 9949.9 11301.8 True False 8207.375683693324 7091.969824825944 7296.7689932283265 7668.8267765194405 8592.298525212043 7310.018722305238 7770.065066643782 7527.235414296984 8524.683746760891 7702.210679494335 8495.251146188126 0.9661133664513293 0.8348157932927217 0.8589232816857255 0.9027192539164063 1.011423721012352 0.8604829447079138 0.9146362989080389 0.8860521348653128 1.003464594520666 0.9066489673999063 1.0 13.052440883278685 -8.766798267326056 24.945376045648487 1.0016360670120366 0.9029500534805848 0.1598073549414144 0.05526051022687761 77.63322942352241 361378.08588755585 0.007931253780400296 0.008564660001832423 1.7108098130824892e-09 8.766798267326056 -0.09868601353145179 ESAKQT(ph)PAPAASVTGSR ddPTM_A549_PD325901_60min_R1 2 ESAKQTPAPAASVTGSR 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ES(0.007)AKQT(0.993)PAPAASVTGSR;ES(0.003)AKQT(0.997)PAPAASVTGSR 128.38 2.2305e-12 52496000.0 11838.4 12356.0 12574.3 13452.2 20554.0 12718.8 13654.7 14476.9 15661.400000000001 14594.5 14311.7 True False 13040.225653030533 13397.283483385765 13427.667613408496 14283.111841837159 19110.357947450575 12615.222309704703 14174.33708063855 14188.14687259165 15003.205821985564 13673.00077928705 12551.451629341158 1.0389416330575487 1.0673891657334145 1.0698099319459617 1.1379649353424548 1.5225615738961107 1.005080741435076 1.1292986261050173 1.1303988806700602 1.1953363057156683 1.0893561305151414 1.0 13.615566607258726 -10.885929481666244 1.0630677038284502 0.9975186681201351 1.1493503205605324 0.06216112526232309 0.13324913360060028 0.8485885082673954 1.6564859368786258 0.09858403038679234 0.022139833348671437 1.300380709512466e-11 10.885929481666244 0.1518316524403973 ESAPQVLLPEEEKIIVEET(ph)KSNGQTVIEEK ddPTM_A549_PD325901_60min_R1 1 ESAPQVLLPEEEKIIVEETKSNGQTVIEEK 30 2 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 ESAPQVLLPEEEKIIVEET(0.453)KS(0.453)NGQT(0.094)VIEEK 75.163 4.6305e-06 4602000.0 1186.9 1188.0 964.21 1413.9 1519.8 1298.1 1039.6 1682.3 1126.3 1505.6 1356.5 True False 1307.3932142504016 1288.116929286363 1029.6470888657504 1501.2333918001177 1413.0544910253682 1287.5287039836837 1079.1625468909483 1648.7452067611816 1078.9655278137552 1410.5361590526966 1189.6590995619858 1.0989645813088502 1.0827613807691867 0.8654975944325989 1.26190216369786 1.1877810135236497 1.0822669321469756 0.907119146390995 1.3858971930431367 0.906953536698886 1.1856641617519121 1.0 10.216332508758141 ESAQAIEDLAGFKDPAAGHT(ph)EESMTDDKTTK ddPTM_A549_PD325901_60min_R1 1 ESAQAIEDLAGFKDPAAGHTEESMTDDKTTK 31 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ESAQAIEDLAGFKDPAAGHT(0.448)EES(0.448)MT(0.094)DDKT(0.005)T(0.005)K 80.816 2.3475999999999998e-06 4441500.0 1119.2 1285.5 1079.3 1786.6 1555.5 1293.4 1404.4 997.14 2214.7 1601.5 1572.6 True False 1232.8203600885063 1393.8335964626424 1152.5477883581427 1896.954224337005 1446.2470461836815 1282.866979225403 1457.8452105171684 977.2512604588027 2121.623860826711 1500.3810166863 1379.1801695327526 0.8938791227734727 1.0106247372559412 0.8356760152291126 1.375421620932722 1.0486280749480688 0.930166346330241 1.057037537750464 0.7085740369874097 1.5383224814967345 1.0878789079418163 1.0 10.429595220638486 -8.761693262103599 24.99999987950064 1.2542078190888462 0.9945859153674832 0.18936558850392615 0.2014648883165359 8.209598662516902 808385.4172414794 0.04104132104429138 0.045048950201089545 1.7310385429551066e-09 8.761693262103599 -0.25962190372136296 ESAQAIEDLAGFKDPAAGHTEES(ph)MTDDKTTK ddPTM_A549_PD325901_60min_R1 1 ESAQAIEDLAGFKDPAAGHTEESMTDDKTTK 31 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ESAQAIEDLAGFKDPAAGHT(0.048)EES(0.757)MT(0.188)DDKT(0.003)T(0.003)K 91.976 8.2083e-10 4285000.0 1240.3 1106.6 1312.8 1706.2 1342.2 970.53 1327.4 1454.4 1809.0 1205.2 1348.5 True False 1366.2143429393993 1199.857065613037 1401.8945025077073 1811.5880989386526 1247.9285023386287 962.6263254581964 1377.9149333811513 1425.3908510452716 1732.9740209669558 1129.103466319281 1182.6430488458077 1.1552212176554428 1.0145555472414345 1.185391064426309 1.5318130865493689 1.055203007836165 0.8139618512937314 1.165114811883364 1.2052587231932508 1.4653398780454 0.954728873958395 1.0 10.207798982711878 -8.21349257459282 4.847322813739579 1.224906655782359 1.1284947768206255 0.0 0.20591544253374655 0.6803524894665058 36.70748060156434 0.03775647059631583 0.048570615085131684 6.1165626073884465e-09 8.21349257459282 -0.09641187896173342 ESAS(ph)PTIPNLDLLEAHTK ddPTM_A549_MK2206_60min_R1 4 ESASPTIPNLDLLEAHTK 18 0 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ES(0.184)AS(0.665)PT(0.151)IPNLDLLEAHTK;ES(0.091)AS(0.647)PT(0.262)IPNLDLLEAHTK;ES(0.247)AS(0.377)PT(0.377)IPNLDLLEAHTK;ES(0.252)AS(0.619)PT(0.129)IPNLDLLEAHTK 157.28 4.0249e-23 85577300.0 4464.13 5183.9 5090.08 4224.92 6279.650000000001 5334.860000000001 4567.91 4017.24 7164.84 7735.3 6329.320000000001 True False 5217.566006500224 5447.738367772871 5811.929882959341 5260.025589663863 5355.921803602057 5899.391344206536 5397.840119015237 4586.696072281528 5542.015179898407 5987.89035760083 4757.575163654593 1.0966859854069617 1.1450661692937123 1.2216159877745014 1.1056106122815947 1.125767143842208 1.2399996093124974 1.1345780010480837 0.9640827342721788 1.1648823169913383 1.258601315086981 1.0 12.216010734093626 -14.999999999996628 0.2601983254545145 0.0641462586900399 1.1511237933710012 0.0 0.10361522179521986 35.970110724263705 0.4673332697637162 17.42993818543808 0.032341737127793944 1.0000000000077633e-15 14.999999999996628 1.0869775346809614 ESAS(ph)PTIPNLDLLEAHTK ddPTM_A549_PD325901_60min_R1 1 ESASPTIPNLDLLEAHTK 18 0 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ES(0.091)AS(0.724)PT(0.185)IPNLDLLEAHTK 161.8 2.2331999999999998e-23 60351000.0 2890.4 2392.9 2324.9 3046.5 2885.5 2735.3 2512.3 2873.5 3056.5 2956.2 2738.0 True False 3183.8312801999814 2594.558080883282 2482.6816947594225 3234.675385896498 2682.8324344345947 2713.0246236858247 2607.9069512833116 2816.1857882828585 2928.0459342650647 2769.5450274917516 2401.24335761203 1.3259094585757494 1.080506093919401 1.033915070244434 1.3470835330548474 1.1172680294689485 1.1298415943912707 1.0860652432483155 1.1728031560630643 1.2193874165161356 1.1533795684274113 1.0 11.229565907734175 -10.892646955724059 1.0828591550392472 0.9977383917308625 1.1662690252301786 0.03286904156388115 0.10334670442753038 0.5162960629222874 1.051201659762347 0.06725134489605776 0.015239404383041017 1.2804217545953255e-11 10.892646955724059 0.16853063349931607 ESAWS(ph)PPPIEIR ddPTM_A549_MK2206_60min_R1 2 ESAWSPPPIEIR 12 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ES(0.048)AWS(0.952)PPPIEIR;ES(0.001)AWS(0.999)PPPIEIR 66.393 0.0053479999999999995 5085200.0 3390.1 2606.8999999999996 2940.3 2034.46 4236.200000000001 3455.2000000000003 3195.0 4013.6000000000004 4788.8 3976.2 4814.3 True False 3962.2660000126366 2739.5800750298217 3357.2787529597467 2532.9027913303803 3613.060591660207 3820.826970623864 3775.4901432501288 4582.540091134495 3704.144446142199 3077.973658409165 3618.776442079451 1.0949187006798924 0.7570459570737068 0.9277386450074709 0.6999334807968692 0.9984205019263473 1.0558339349717631 1.0433057149782443 1.2663230692695784 1.0235902950704778 0.8505564540042365 1.0 11.82128626944756 -6.978569028794661 24.9504158500551 1.0376979423429156 0.8638779915988802 0.27404241110695016 0.12969221808873801 202.62539409023503 235899.83844514083 0.01610843237297285 0.030440227645427465 1.0505844567906293e-07 6.978569028794661 -0.17381995074403533 ESAWS(ph)PPPIEIR ddPTM_A549_PD325901_60min_R1 2 ESAWSPPPIEIR 12 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ESAWS(1)PPPIEIR;ES(0.028)AWS(0.972)PPPIEIR 106.01 0.00015349 8811000.0 1989.7399999999998 1590.77 1717.07 1669.5 1997.82 1673.77 1493.12 1864.85 1746.7 2058.4 2759.3999999999996 True False 2191.73694003083 1724.829770707801 1833.6006957807053 1772.6212232904013 1857.5000153048434 1660.1393720566755 1549.9414986666152 1827.6541038034768 1673.2922733128703 1928.4322727112572 2420.0112932778065 0.9056721950508799 0.7127362485865053 0.7576827020906866 0.7324846905526041 0.7675584078737647 0.6860048036420874 0.6404687048246303 0.755225444145756 0.6914398614423258 0.7968691212590476 1.0 11.240798064690003 -10.749112393195965 0.9070875900621131 1.0067022859920216 0.7333643470898259 0.23046630025189274 0.08653672553891428 0.2640774333430789 0.3705690512399504 0.04900779133447023 0.011372658244590198 1.7819175565995954e-11 10.749112393195965 -0.2733379389021957 ESCSS(ph)PSTVGSSLTTR ddPTM_A549_MK2206_60min_R1 2 ESCSSPSTVGSSLTTR 16 0 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;H0YEP9 E9PMC9 C11orf30;EMSY Protein EMSY 1 ESCS(0.129)S(0.856)PS(0.013)T(0.003)VGSSLTTR;ESCS(0.026)S(0.948)PS(0.02)T(0.004)VGS(0.001)S(0.001)LTTR 119.45 1.1517999999999999e-07 7021600.0 2610.2 3315.6 2729.8999999999996 2500.7 3670.8 2953.1 2995.0 2503.5 4391.5 4581.700000000001 4299.200000000001 True False 3050.7379467369624 3484.3498779273764 3117.040869198657 3113.3716122606875 3130.830182679358 3265.595081890868 3539.152732092059 2858.3787916472006 3396.8322617844724 3546.6907878711563 3231.589988116231 0.94403620445529 1.0782153338575249 0.9645533253479514 0.9634178914125008 0.9688203621723658 1.0105227129368783 1.0951738138522684 0.8845115878433008 1.051133427902642 1.0975064290066714 1.0 11.65802845068655 -7.50336522862241 24.02098528835802 1.0184709955559796 0.987132942237956 0.08689609187329628 0.06255468977958838 1096.74925514755 1350090.273177633 0.008369640249026826 0.013254191022713809 3.137868730558577e-08 7.50336522862241 -0.03133805331802364 ESDES(ph)GESAPDEGGEGAR ddPTM_A549_PD325901_60min_R1 1 ESDESGESAPDEGGEGAR 18 0 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 ES(0.021)DES(0.859)GES(0.12)APDEGGEGAR 52.823 0.01403 793840.0 0.0 0.0 0.0 0.0 285.32 0.0 0.0 0.0 152.51 0.0 0.0 True False 0.0 0.0 0.0 0.0 265.28010750056427 0.0 0.0 0.0 146.10053506781122 0.0 0.0 0.0 ESDESGES(ph)APDEGGEGAR ddPTM_A549_PD325901_60min_R1 1 ESDESGESAPDEGGEGAR 18 0 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 ES(0.004)DES(0.47)GES(0.525)APDEGGEGAR 55.656000000000006 0.0097782 938630.0 0.0 0.0 177.28 0.0 126.1 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 189.31128687124195 0.0 117.24317102138365 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ESDILS(ph)DEDDDHRQTVK ddPTM_A549_MK2206_60min_R1 1 ESDILSDEDDDHRQTVK 17 1 E9PKT1;Q8IVF5-3;Q8IVF5-4;Q8IVF5;Q8IVF5-5;Q8IVF5-2 E9PKT1 TIAM2 T-lymphoma invasion and metastasis-inducing protein 2 1 ES(0.012)DILS(0.986)DEDDDHRQT(0.002)VK 43.798 0.025072999999999998 693260.0 175.21 119.73 138.19 270.02 135.56 176.29 205.34 209.14 184.25 309.6 197.2 True False 204.78116452677318 125.82374559182196 157.7874199474568 336.1749121216585 115.61930357524615 194.94489078816886 242.64762003598787 238.78623546438806 142.51766918679007 239.6611449734617 148.22979755687587 1.3815114632953507 0.8488424572228355 1.0644784149213566 2.2679307242031954 0.7800004147673679 1.3151531878289746 1.6369692466380372 1.6109192578014933 0.9614643717779211 1.6168216439849319 1.0 7.2116916810512945 -8.787713541714083 24.732922825932626 0.9818025179008155 1.3543596748156488 0.0 0.43233394079294896 255.9358840988116 240921.43681719634 0.0653415419629831 0.06957228745326718 1.6303710619730855e-09 8.787713541714083 0.37255715691483327 ESDKEDGRES(ph)PSYDTPSQR ddPTM_A549_MK2206_60min_R1 8 ESDKEDGRESPSYDTPSQR 19 2 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 ES(0.007)DKEDGRES(0.982)PS(0.009)Y(0.001)DTPSQR;ES(0.001)DKEDGRES(0.944)PS(0.026)Y(0.013)DT(0.013)PS(0.004)QR;ESDKEDGRES(0.999)PS(0.001)YDTPSQR;ES(0.008)DKEDGRES(0.975)PS(0.016)YDTPSQR;ES(0.001)DKEDGRES(0.868)PS(0.13)YDT(0.001)PSQR;ESDKEDGRES(1)PSYDTPSQR;ESDKEDGRES(0.997)PS(0.003)YDTPSQR;ESDKEDGRES(0.99)PS(0.009)YDTPSQR 246.59 1.6439999999999998e-86 559676000.0 21445.38 22038.19 20067.6 18371.5 27270.69 21159.25 20337.46 21592.16 28985.64 27674.15 27247.26 True False 25064.83585479808 23159.839738279756 22913.48743423969 22872.518324727982 23259.207626264604 23398.30779062658 24032.51322965376 24652.91480321672 22420.438820555708 21422.540294468094 20481.013355880114 1.2238083838562581 1.130795597651937 1.1187672717210162 1.1167669258982864 1.1356473052436573 1.1424389694032844 1.1734044996730597 1.20369604642335 1.0946938235416357 1.0459707204046946 1.0 14.321999478058013 -9.66024422815837 0.8772688605877312 1.0136495314078737 1.1509341354007285 0.6371730844771851 0.03705804940739572 0.20709992693259113 0.3351419194275969 0.01279378550761364 0.007921932461131395 2.1865316686871797e-10 9.66024422815837 0.1372846039928548 ESDKEDGRES(ph)PSYDTPSQR ddPTM_A549_PD325901_60min_R1 7 ESDKEDGRESPSYDTPSQR 19 2 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 ESDKEDGRES(0.967)PS(0.032)YDTPSQR;ESDKEDGRES(0.853)PS(0.147)YDTPSQR;ESDKEDGRES(0.951)PS(0.049)YDTPSQR;ES(0.009)DKEDGRES(0.991)PSYDTPSQR;ES(0.002)DKEDGRES(0.996)PS(0.002)YDTPSQR;ESDKEDGRES(0.998)PS(0.002)YDTPSQR;ESDKEDGRES(0.996)PS(0.004)YDTPSQR 226.67 1.6812e-75 635300900.0 36448.56 36083.829999999994 37123.030000000006 35196.3 43370.600000000006 34261.03 38840.65 36702.72 38588.68 39384.270000000004 38677.36 True False 40148.79097918828 39124.74099031237 39642.42205471413 37370.295514403064 40324.39867644743 33982.01953088828 40318.752190169216 35970.655456873166 36966.93197534948 36897.54047083845 33920.289915985806 1.1836216930524268 1.1534317981130766 1.1686934915031968 1.1017092013942769 1.1887987625201142 1.001819843375613 1.1886322991351548 1.06044658067386 1.0898176892623745 1.087771966637866 1.0 15.049860880186634 -14.999999999894303 0.04434296664630547 0.39627480917089664 1.4514001765129347 0.32895976351327916 0.0554228321740577 231.66158061871104 0.7873075488701085 17.633927004174698 4.857904787349808 1.0000000002433759e-15 14.999999999894303 1.055125367342038 ESDLPAADPST(ph)PIPLKYEDESSR ddPTM_A549_MK2206_60min_R1 2 ESDLPAADPSTPIPLKYEDESSR 23 1 Q3B7T1-5;Q3B7T1;H0Y353;Q3B7T1-3 Q3B7T1-5 EDRF1 Erythroid differentiation-related factor 1 1 ESDLPAADPS(0.13)T(0.858)PIPLKY(0.002)EDES(0.005)S(0.005)R;ESDLPAADPS(0.116)T(0.882)PIPLKY(0.001)EDESSR 62.373999999999995 0.00033342 5179700.0 1594.94 1597.55 1790.52 1540.63 2263.2 2008.2600000000002 1634.5 1553.9499999999998 2413.5 2068.88 2283.4 True False 1864.1268794608266 1678.8584713122452 2044.4426598474604 1918.0844191615085 1930.2862780429111 2220.772740224901 1931.4674926893076 1774.2271712722852 1866.8461035675323 1601.5185711004365 1716.3687613659745 1.086087629547195 0.9781455530431138 1.1911441794246989 1.117524661562238 1.1246337742168473 1.2938785593239859 1.1253219798478193 1.0337097779968123 1.0876719185228005 0.9330853643746497 1.0 10.74514383344287 -9.695578365394645 0.650154729686914 1.0077925553704548 1.124544352970706 0.3292458339660602 0.07940158736976996 0.7232545694909667 0.653329664957886 0.037060733255787355 0.018769626714506722 2.015680222482189e-10 9.695578365394645 0.11675179760025123 ESDQTLAALLS(ph)PK ddPTM_A549_MK2206_60min_R1 6 ESDQTLAALLSPK 13 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK 166.9 1.1157999999999999e-19 209009700.0 9064.92 8969.34 8900.579999999998 7714.849999999999 12344.6 10956.73 9807.24 9897.11 14250.390000000001 13038.410000000002 11993.690000000002 True False 10594.856879984232 9425.841094851348 10162.816081018413 9604.988596332774 10528.725692792732 12116.16389611126 11589.088561029235 11300.055651128196 11022.699418196702 10093.024125430988 9015.32576399557 1.1752051070962763 1.045535274221066 1.1272821800411879 1.0654067138308119 1.1678696886185982 1.3439518674410504 1.285487498112656 1.2534273244187284 1.2226623537241397 1.1195407009849174 1.0 13.138163908278617 -4.325384691940366 16.363332919439728 1.142490866972206 1.1387599623390738 0.0 0.10352305728239469 0.0 0.0 0.016604018585549916 0.0 4.727323338012139e-05 4.325384691940366 -0.0037309046331321927 ESDQTLAALLS(ph)PK ddPTM_A549_PD325901_60min_R1 4 ESDQTLAALLSPK 13 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK 189.1 1.8928999999999999e-25 308234000.0 5133.63 6113.98 5330.0 5599.38 6585.47 5172.62 5616.97 4892.54 5918.8 6069.710000000001 6474.099999999999 True False 5654.792338421336 6629.226551614676 5691.725851893725 5945.240985485358 6122.929305838157 5130.495897696692 5830.726867073923 4794.954451576622 5670.0534191814395 5686.467474736808 5677.826742701255 0.995943094898144 1.1675640790090027 1.0024479628953695 1.0470979927536286 1.078393121753684 0.9036020523683383 1.0269293395697956 0.8445052427393016 0.9986309333003498 1.0015218379191757 1.0 12.471123110959448 -7.22437574709384 24.994450310117845 0.9827479287832818 1.0606360546215685 0.32063505971671025 0.06587364334920426 608.5309922981917 410372.8561102634 0.009158225865276419 0.015862273117644526 5.965189612209029e-08 7.22437574709384 0.07788812583828675 ESDQTLAALLS(ph)PKESSGGEK ddPTM_A549_MK2206_60min_R1 2 ESDQTLAALLSPKESSGGEK 20 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 ESDQTLAALLS(0.965)PKES(0.016)S(0.019)GGEK;ESDQTLAALLS(0.992)PKES(0.003)S(0.004)GGEK 127.41 3.3211e-17 36403000.0 4771.5 4907.2 5336.5 5193.6 5049.4 3841.8999999999996 3911.5 3633.1000000000004 5848.0 7617.599999999999 7237.1 True False 5576.812548025218 5156.95551965413 6093.295944349113 6466.03223314956 4306.63994889973 4248.447307953179 4622.168918723907 4148.103050902115 4523.437337337033 5896.778869347036 5439.928336201146 1.0251628704211317 0.9479822528793415 1.1201059219475364 1.188624524723973 0.7916721843999838 0.7809748668343651 0.8496745973590706 0.7625289883503964 0.8315251705127932 1.083980983739378 1.0 12.409371930680308 -6.767611733321154 24.99999593322483 0.8829842980812211 1.0652653514485648 0.44445283683737513 0.10646886944187567 116.4302862803201 471581.7177804984 0.015756419291635914 0.03031530434055606 1.707608337786781e-07 6.767611733321154 0.18228105336734368 ESDQTLAALLS(ph)PKESSGGEK ddPTM_A549_PD325901_60min_R1 2 ESDQTLAALLSPKESSGGEK 20 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 ESDQTLAALLS(0.985)PKES(0.009)S(0.006)GGEK;ESDQTLAALLS(0.996)PKES(0.003)S(0.001)GGEK 130.9 2.4409e-17 126109000.0 8807.2 8460.1 8898.8 9424.2 8681.8 8846.2 8701.6 8937.0 9071.2 9334.2 9960.099999999999 True False 9701.300460482038 9173.062317723528 9502.726080831502 10006.311430088885 8072.020318584047 8774.15948014826 9032.744149698223 8758.744524059126 8689.96900994774 8744.837019015466 8735.070842275953 1.1106149721797025 1.0501417198962815 1.0878819705548644 1.1455329453838414 0.9240932860575238 1.0044749079404287 1.0340779500014576 1.0027101877260798 0.994836695300749 1.0011180420761154 1.0 13.092603688248971 -6.753557810752437 24.999989517847823 0.9970075482003946 1.094324174881327 0.7013313497334004 0.032600747090785864 76.48436998596097 242602.67550704372 0.004410171625185369 0.009051500403072925 1.7637709659290998e-07 6.753557810752437 0.09731662668093244 ESDRVYLDLT(ph)PVK ddPTM_A549_PD325901_60min_R1 2 ESDRVYLDLTPVK 13 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 ESDRVYLDLT(1)PVK;ESDRVYLDLT(1)PVK 101.96 5.4495e-05 20376100.0 4706.200000000001 4528.3 4156.4 4623.7 5118.700000000001 4790.5 4350.4 4712.4 4999.1 5053.6 5393.200000000001 True False 5183.969959478675 4909.915733070231 4438.478298463618 4909.295447815406 4759.180170556354 4751.487756285211 4515.956852630226 4618.4074851937185 4789.0052118385365 4734.514833547226 4729.870590311615 1.09600672164207 1.0380655536596306 0.9383931787806482 1.037934411539993 1.0061966981305523 1.0045703504061771 0.954773870955464 0.9764342167529465 1.0125023762062433 1.000981896469879 1.0 12.207584996499548 -5.447957415493889 4.2481992440690455 0.9990199915467992 1.0901646696224125 0.5571614238129833 0.027160195258887035 0.1262977530241135 4.067998512069334 0.0035753301385333825 0.02316846607613472 3.564860867593519e-06 5.447957415493889 0.09114467807561333 ESDSAEGDEAES(ph)PEQQVR ddPTM_A549_MK2206_60min_R1 2 ESDSAEGDEAESPEQQVR 18 0 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 ESDS(0.001)AEGDEAES(0.999)PEQQVR;ESDSAEGDEAES(1)PEQQVR 97.836 1.4299e-06 15087600.0 124.71 288.2 325.57 573.73 1012.99 323.6 296.28 523.06 713.37 618.22 545.05 True False 145.7579991332337 302.8681489982718 371.74072155940024 714.2938757557187 863.9805128997389 357.8431372117049 350.11024088956106 597.2053568040684 551.7928340178044 478.563672627563 409.69904238526954 0.35576846429669456 0.7392454403480472 0.9073507211418513 1.743459959284007 2.1088175063081445 0.8734292741529018 0.8545546966651857 1.4576684224769878 1.346824807803465 1.168085895054485 1.0 8.678420710497168 -5.744971776845882 2.402967176392265 1.2432766560746076 0.4444178751083667 0.3972333008092348 0.366338894614941 0.2643789398481094 2.9131854895163607 0.0543794724378541 0.28815670167284246 1.7989878207375297e-06 5.744971776845882 -0.7988587809662409 ESDSAEGDEAES(ph)PEQQVR ddPTM_A549_PD325901_60min_R1 2 ESDSAEGDEAESPEQQVR 18 0 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 ESDSAEGDEAES(1)PEQQVR;ESDSAEGDEAES(1)PEQQVR 146.78 7.2883e-17 26082000.0 252.06 322.62 451.4 228.88 683.75 605.36 381.8 400.52 432.1 434.0 604.76 True False 277.64894564323527 349.80831963498866 482.0347184887108 243.0173977758053 635.7257588094454 600.4301488664685 396.3296079289767 392.5313143981384 413.9403396682266 406.59716593309645 530.3783538894997 0.5234922270245616 0.6595448646606504 0.908850662840473 0.45819629702768017 1.1986268937021778 1.1320789102029671 0.7472582638837273 0.7400967847189316 0.7804623560381349 0.76661719497287 1.0 9.05087808631586 -5.312974548063294 0.8385571632365496 0.8935908758371696 0.33086713867461776 0.22800040917801567 0.19480090590654336 2.331734745392296 1.241848243349962 0.030409392319719217 1.1894110709478067 4.864357125426933e-06 5.312974548063294 -0.5627237371625518 ESDTKNEVNGTSEDIKS(ph)EGDT(ph)QSN ddPTM_A549_MK2206_60min_R1 1 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 2 ESDTKNEVNGT(0.003)S(0.015)EDIKS(0.975)EGDT(0.603)QS(0.405)N 59.873000000000005 0.014177 5566100.0 957.36 1154.7 895.95 816.71 1149.5 1089.8 922.8 962.26 1611.1 1530.7 1302.6 True False 1118.9389627952255 1213.469297877531 1023.0091822991818 1016.8039866635056 980.4100727334421 1205.121912649307 1090.460815083324 1098.6633017976571 1246.1884223980333 1184.91380688268 979.1284700688974 1.142790754227063 1.2393361392015738 1.0448160926494117 1.0384786243545314 1.001308921866458 1.2308108174655643 1.1137055538856842 1.1220828883878216 1.2727527188647103 1.2101719468940602 1.0 9.935354356009684 -7.261396297614632 24.9999981918762 1.136356980495919 1.0957123640875335 0.08716702214190852 0.09040632840326553 14.82394057142027 8600233.742645344 0.017256999547068795 0.028694289675684506 5.477768854651208e-08 7.261396297614632 -0.04064461640838557 ESDTKNEVNGTSEDIKS(ph)EGDTQSN ddPTM_A549_MK2206_60min_R1 2 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 1 ESDTKNEVNGTSEDIKS(0.988)EGDT(0.012)QSN;ESDTKNEVNGTSEDIKS(1)EGDTQSN 204.86 3.0584999999999997e-62 69015000.0 6914.0 7113.2 7259.0 6882.9 8877.5 7190.2 6672.2 8401.8 10314.3 9877.0 9546.2 True False 8080.914168929346 7475.231497066303 8288.435352764953 8569.210808985117 7571.631509953141 7951.06219153152 7884.452373644288 9592.780879433369 7978.127518552558 7645.778840125583 7175.615078283206 1.1261632739172425 1.0417548064541362 1.1550836077940783 1.1942127212090277 1.055189196654161 1.1080669886537229 1.0987841861119834 1.3368583424249785 1.1118388363247262 1.065522433507521 1.0 12.808886786465202 -10.12301136876891 1.060080356892425 1.0127462836776244 1.1345573788741905 0.19761032234055942 0.07738208735167026 0.42771916256409376 0.9617006377146712 0.02857658669671001 0.014312588101313596 7.533358429830112e-11 10.12301136876891 0.12181109519656608 ESDTKNEVNGTSEDIKS(ph)EGDTQSN ddPTM_A549_PD325901_60min_R1 2 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 1 ESDTKNEVNGTSEDIKS(1)EGDTQSN;ESDTKNEVNGTSEDIKS(1)EGDTQSN 261.92 1.0709999999999997e-124 98671000.0 10702.0 8896.400000000001 10317.8 9621.2 11904.7 9819.1 10234.0 10476.2 12467.3 12821.8 11130.2 True False 11788.459161604007 9646.130849918516 11018.027953971678 10215.479672669424 11068.554940985458 9739.136505112234 10623.460470259675 10267.243972580094 11943.342737203606 12012.229359817915 9761.255960150987 1.2076785210559793 0.9882059121590036 1.1287510540601837 1.0465333266920511 1.13392733334433 0.9977339539984349 1.0883292594342902 1.051836363526859 1.2235456980086061 1.2306028454592548 1.0 13.252851072911865 ESDTKNEVNGTSEDIKSEGDTQS(ph)N ddPTM_A549_MK2206_60min_R1 2 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 1 ESDTKNEVNGTSEDIKSEGDTQS(1)N;ESDTKNEVNGTSEDIKS(0.002)EGDT(0.23)QS(0.768)N 187.45 7.0061e-51 72146000.0 3277.6 3607.2000000000003 3046.6 3492.9 4620.8 3489.8 3617.0 3216.1 4986.3 4803.9 5014.6 True False 3830.7787503735613 3790.7910724030753 3478.6536913808663 4348.660656802237 3941.0864411367465 3859.0883196582417 4274.162080793651 3671.9920238931763 3856.9110114848945 3718.69565354655 3769.3364240806786 1.016300568423756 1.0056918900062441 0.9228822530027395 1.1536939576474265 1.0455650538272017 1.0238110599531993 1.133929583331394 0.9741746585511416 1.0232334229560247 0.9865650701246494 1.0 11.880094850078901 -4.143356625556215 12.045276518883517 1.0221484874104476 1.030311253609246 0.0 0.06365284207346306 0.0 0.0 0.007715865894258116 0.0 7.188584372824437e-05 4.143356625556215 0.00816276619879841 ESEDDLNKES(ph)EEEVGPTK ddPTM_A549_MK2206_60min_R1 2 ESEDDLNKESEEEVGPTK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEDDLNKES(1)EEEVGPTK;ESEDDLNKES(1)EEEVGPTK 174.47 4.9828e-31 19416900.0 9293.0 8264.7 6860.1 8253.9 7447.0 8052.599999999999 8487.7 8272.5 8595.3 10062.9 9097.3 True False 10861.43120796361 8685.33792861214 7832.965334550613 10276.105870531654 6351.556164981251 8904.720787116732 10029.805223431646 9445.152208468737 6648.478273873629 7789.683901012427 6838.189337292937 1.5883490017934148 1.270122469590823 1.1454735966189966 1.5027524632126812 0.9288359610551041 1.302204479562112 1.466734062002762 1.3812358422072923 0.9722571204069045 1.1391442261667708 1.0 12.739398653644558 -8.767274690105886 24.992689680546437 0.9868991694432335 1.3124415618427772 0.3325221217475728 0.17616466293392172 91.77522846725618 393073.0415463126 0.028180244258835547 0.03039455770186259 1.7089340769231741e-09 8.767274690105886 0.32554239239954363 ESEDDPES(ph)EPDDHEK ddPTM_A549_MK2206_60min_R1 3 ESEDDPESEPDDHEK 15 0 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 ESEDDPES(1)EPDDHEK;ESEDDPES(1)EPDDHEK;ESEDDPES(1)EPDDHEK 121.76 4.1858999999999994e-07 82561100.0 1354.24 1417.33 1457.0900000000001 1449.12 1935.09 1835.76 1174.98 1536.7400000000002 1856.7400000000002 2271.08 2128.96 True False 1582.8026040108286 1489.4660430941028 1663.7272720981257 1804.1544650534681 1650.4408243982223 2030.018904721135 1388.4586568125314 1754.577601068872 1436.191354604509 1758.0414506664383 1600.2804756931366 0.9890782447528532 0.9307531184175473 1.0396472976885556 1.127398910664099 1.0313447232950583 1.2685394439008348 0.8676345665038138 1.0964188014034877 0.8974622739069817 1.0985833279662867 1.0 10.644109068168158 -8.760828397913574 24.99996071078299 0.951579407922543 1.0439254449077415 0.0 0.11042457487284729 23.339940360973866 955016.1730922475 0.01720112930685463 0.018935545207668398 1.7344892083284798e-09 8.760828397913574 0.0923460369851985 ESEDDPES(ph)EPDDHEK ddPTM_A549_PD325901_60min_R1 4 ESEDDPESEPDDHEK 15 0 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 ESEDDPES(1)EPDDHEK;ESEDDPES(1)EPDDHEK;ESEDDPES(1)EPDDHEK;ESEDDPES(1)EPDDHEK 176.21 4.6292e-28 159462700.0 7443.51 7644.200000000001 7341.66 7308.219999999999 10317.28 8269.27 7260.13 8930.13 8804.890000000001 8889.02 9370.34 True False 8199.169655577554 8288.403561322235 7839.90919658801 7759.632151228137 9592.629845483749 8201.927806787735 7536.418220045573 8752.01155159854 8434.851093129762 8327.765760190354 8217.847583479288 0.9977271508491734 1.008585700467941 0.954010051530882 0.9442414296935463 1.1672922560365135 0.9980627802438734 0.9170793378057263 1.0650004715581616 1.0264063682668838 1.0133755433639386 1.0 13.004544857733034 ESEDDPES(ph)EPDDHEKR ddPTM_A549_MK2206_60min_R1 5 ESEDDPESEPDDHEKR 16 1 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 ESEDDPES(1)EPDDHEKR;ESEDDPES(1)EPDDHEKR;ESEDDPES(1)EPDDHEKR;ESEDDPES(1)EPDDHEKR;ESEDDPES(1)EPDDHEKR 78.021 8.629799999999999e-05 71422400.0 1859.0 1756.6799999999998 1954.56 1612.14 2192.2200000000003 2097.73 1306.27 1421.81 2555.5699999999997 2796.12 2748.75 True False 2172.75375181366 1846.0875086130611 2231.745998498452 2007.114372371716 1869.747342016273 2319.710396239523 1543.6023503672448 1623.3559216105073 1976.7374754067043 2164.474550010321 2066.1595133593437 1.0515905174625197 0.8934874082454214 1.0801421594356397 0.9714227577271481 0.9049385247977653 1.1227160251862327 0.747087695982156 0.785687605973419 0.9567206513463962 1.0475834687570311 1.0 11.012735923303076 -6.514412194449205 24.091975946146025 0.9524835900664435 1.0017260441805904 0.06318315211755887 0.10992513683743796 754.0151374716945 2145579.127773147 0.015317479755092206 0.033189328272160486 3.0590586637157557e-07 6.514412194449205 0.04924245411414696 ESEDDPES(ph)EPDDHEKR ddPTM_A549_PD325901_60min_R1 5 ESEDDPESEPDDHEKR 16 1 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 ESEDDPES(1)EPDDHEKR;ESEDDPES(1)EPDDHEKR;ESEDDPES(1)EPDDHEKR;ESEDDPES(1)EPDDHEKR;ESEDDPES(1)EPDDHEKR 90.654 2.2731e-06 73121900.0 1848.69 1770.86 1774.6 2214.86 2790.2400000000002 2030.43 1937.8300000000002 1980.4699999999998 2275.83 1897.17 2136.6000000000004 True False 2036.367647866353 1920.0965870337109 1895.0350275366986 2351.666871887977 2594.2631682054343 2013.8948512669215 2011.5751810712636 1940.9679722013416 2180.18477951201 1777.382362426943 1873.8117450233235 1.0867514590378482 1.0247009029233143 1.011326261866883 1.2550176815434069 1.384484420644478 1.0747583670641654 1.0735204250981067 1.0358393671917037 1.1635025691894536 0.9485383828698436 1.0 10.871760302673131 -10.936484911343275 0.9118585829354909 0.9905958703033096 1.1268413139983178 0.21438062960102722 0.10721207452101265 1.1366718905823923 1.474597270178224 0.11295543689492582 0.020006457728433555 1.1574842457716415e-11 10.936484911343275 0.13624544369500813 ESEDKPEIEDVGS(ph)DEEEEK ddPTM_A549_MK2206_60min_R1 4 ESEDKPEIEDVGSDEEEEK 19 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK 244.22 5.7381999999999996e-86 1386065000.0 21285.7 20331.8 19502.6 18300.89 31722.9 29246.0 22992.0 29744.6 32184.1 24723.4 22786.5 True False 24878.205774599253 21366.601775860734 22268.361938398368 22784.608871558157 27056.503433071528 32340.79230807637 27169.34878673143 33960.9881390171 24894.452737446805 19138.36676885297 17127.98317459306 1.4524889195070294 1.247467466429735 1.3001158228267256 1.330256378658516 1.5796666284216125 1.8881844977550748 1.5862549904318748 1.9827779950994708 1.4534374820249825 1.1173742158529225 1.0 14.06406766317725 -10.173361233750239 0.973361022496074 1.0414467243923848 1.5322143497935132 0.403405980127577 0.2212053998027461 0.37317219835621046 0.7025259130102007 0.10083306843804979 0.04592214819314796 6.708706097740084e-11 10.173361233750239 0.4907676254011284 ESEDKPEIEDVGS(ph)DEEEEK ddPTM_A549_PD325901_60min_R1 4 ESEDKPEIEDVGSDEEEEK 19 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK 272.64 5.725399999999998e-112 2038509000.0 91600.20999999999 78767.12 88293.14 86665.19 94589.16 71304.37 82735.93 72687.43 82810.38 87221.63 81954.78 True False 100899.3958866893 85405.10163563171 94285.24343018247 92018.30195537291 87945.54371648697 70723.69085160855 85884.49109098788 71237.62218646436 79330.14770945357 81714.44139646349 71874.86161415458 1.4038203847730095 1.1882471801352668 1.3117972168952954 1.280257100867258 1.2235925293130239 0.9839836802924804 1.1949169593124382 0.9911340430662516 1.1037259192973639 1.1368987648996205 1.0 16.133199652771875 -7.096101622208653 4.067304746209154 1.0535832380949446 1.286693934854071 0.6568004076566516 0.07729714280884144 0.09742857344004786 2.8723678325288042 0.010542220206233657 0.018915818660198716 8.014904976505349e-08 7.096101622208653 0.23311069675912632 ESEDKPEIEDVGS(ph)DEEEEKK ddPTM_A549_MK2206_60min_R1 4 ESEDKPEIEDVGSDEEEEKK 20 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK 268.68 6.155599999999999e-112 5003720000.0 46685.299999999996 54082.5 46720.0 48442.0 65882.7 59024.4 54998.5 66061.4 71701.5 57774.9 57104.100000000006 True False 54564.63729400012 56835.06824496547 53345.59852337493 60310.29217464402 56191.442104284906 65270.32283077429 64991.01553788486 75425.8057545525 55461.22473376732 44723.50996358929 42923.5759770162 1.2712043685087475 1.3240990982530976 1.242804153874302 1.4050621552812304 1.3091043983467991 1.5206170815247047 1.5141099980273047 1.757211603127845 1.2920923634942372 1.0419334583758093 1.0 15.389482652041853 -9.842074713889197 1.0871403216495867 1.0472961158730323 1.4071996404818576 0.5094219672417 0.14369944840791393 0.2737445522990138 0.6591240887557211 0.0490644034863194 0.030051771833312133 1.438551075706706e-10 9.842074713889197 0.35990352460882535 ESEDKPEIEDVGS(ph)DEEEEKK ddPTM_A549_PD325901_60min_R1 4 ESEDKPEIEDVGSDEEEEKK 20 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK 295.78 1.9111999999999997e-144 9951570000.0 81235.0 81713.0 93238.0 83892.0 99437.0 74639.0 80912.0 81738.0 82092.0 86284.0 83483.0 True False 89481.91739795367 88599.24128179842 99565.69136564134 89073.8183074442 92452.88815902724 74031.16473048153 83991.15043674536 80107.67146777929 78641.95872261991 80836.01351468044 73215.12024233924 1.222178111594599 1.2101221849877228 1.3599061373672914 1.216604138770971 1.2627567618957904 1.0111458464514054 1.1471831249984685 1.0941410900183728 1.074121827053183 1.104089063121338 1.0 16.15985400136482 -7.533593193392476 0.5596370311045402 1.0248925739870798 1.279497708597108 0.5875699716768932 0.06778830671835039 0.36032045495217035 0.22312897649507524 0.015181726049564241 0.037658743561027816 2.9268927346033313e-08 7.533593193392476 0.2546051346100282 ESEDKPEIEDVGS(ph)DEEEEKKDGDK ddPTM_A549_MK2206_60min_R1 4 ESEDKPEIEDVGSDEEEEKKDGDK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK 220.94 4.927299999999999e-76 1309743000.0 22877.899999999998 23689.5 21088.7 21224.1 29061.0 26619.100000000002 21684.3 27921.700000000004 30226.699999999997 30228.0 32582.2 True False 26739.130209046652 24895.194363964474 24079.39476840534 26424.005452786045 24786.1653968739 29435.915493671473 25624.05662387442 31879.686481619992 23380.40071212129 23399.47380574225 24491.140517026583 1.0917878728619126 1.0164979596053108 0.9831879716530558 1.0789209850972725 1.0120461878711697 1.2019005596414432 1.0462582012487422 1.3016823965162745 0.9546472813655578 0.9554260565968584 1.0 14.579972339239227 ESEDKPEIEDVGS(ph)DEEEEKKDGDK ddPTM_A549_PD325901_60min_R1 4 ESEDKPEIEDVGSDEEEEKKDGDK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK 223.27 1.2720999999999998e-88 29137970600.0 57370.3 78754.2 61790.2 88001.6 80067.1 55326.4 59184.9 57622.2 88403.3 74109.1 63918.7 True False 63194.49062221732 85391.09282188892 65983.65454665733 93437.25896586564 74443.46311249972 54875.84014180946 61437.213756719975 56472.88001725856 84688.01673175678 69429.8387784619 56057.10511402337 1.1273234765454996 1.5232875948231457 1.1770792375461199 1.6668227653891312 1.3279933553664152 0.9789274710170789 1.0959754991227812 1.0074169884868205 1.5107454542915923 1.2385555521862504 1.0 15.774609622573445 -7.0143795608574315 24.51056082405141 1.1970138233093433 1.3861701227066079 0.21354746959445814 0.20022095734637224 874.3515136352677 1490371.8469403605 0.034870478156370274 0.06194821665921575 9.674319790181963e-08 7.0143795608574315 0.18915629939726464 ESEDKPEIEDVGSDEEEEKKDGDK ddPTM_A549_PD325901_60min_R1 1 ESEDKPEIEDVGSDEEEEKKDGDK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 134.31 2.6579e-23 18629000.0 3583.5 4167.3 4325.6 3932.0 5015.6 3485.1 4149.3 4008.8 4209.2 4340.4 3971.0 False True 3947.2942819667314 4518.492996140624 4619.161227945872 4174.870709780087 4663.321558880664 3456.7185010812204 4307.20388208408 3928.841339157237 4032.301961887292 4066.346403262704 3482.592174243013 1.1334356951585145 1.2974510853033712 1.3263572065970968 1.1987825449839098 1.3390375115898543 0.9925705704638195 1.2367810144236333 1.1281370722115123 1.1578450074372448 1.1676206112610867 1.0 11.765945822000743 -11.25620866159222 0.15682301956483527 0.7711998800635108 1.3075177040503292 0.15802577026929066 0.10244669097635284 10.031552942770046 0.33508671969296794 1.1557819822353783 0.217197778473765 5.543593008988926e-12 11.25620866159222 0.5363178239868184 ESEDSETQPFDTHLEAYGPCLS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 ESEDSETQPFDTHLEAYGPCLSPPR 25 0 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 ESEDSETQPFDTHLEAYGPCLS(1)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR 218.01 1.4868e-81 53011000.0 12602.2 14845.1 14393.0 13114.5 18213.6 15420.7 13275.3 15219.7 20823.0 21241.0 20849.0 True False 14729.143265791346 15600.652181451234 16434.143825919 16327.553088732271 15534.403567410023 17052.508238567785 15687.25017173347 17377.139083376438 16106.623747498124 16442.64334748481 15671.617896872738 0.9398610508957431 0.9954717045879695 1.0486564906102276 1.041854976057732 0.9912444056276988 1.0881140894821462 1.000997489535771 1.1088286606862738 1.0277575585040388 1.0491988418608604 1.0 13.935866507113994 -5.383074005248183 3.091670400988221 1.026130122960835 0.9364531397382273 0.3619776222786373 0.036431137325511474 0.25591683833194306 3.885239515288118 0.0049039200254980065 0.04673743979347285 4.1392913388567425e-06 5.383074005248183 -0.08967698322260775 ESEDSETQPFDTHLEAYGPCLS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 ESEDSETQPFDTHLEAYGPCLSPPR 25 0 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 ESEDSETQPFDTHLEAYGPCLS(1)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR 263.16 6.583899999999998e-138 76433000.0 12245.0 11985.8 12403.3 13224.2 12392.5 14227.2 12388.8 14054.1 12040.599999999999 13338.7 15252.099999999999 True False 13488.103385707438 12995.885430168764 13245.062525101957 14041.02879966273 11522.093551804097 14111.338400213132 12860.262563411487 13773.779950271835 11534.575454314388 12496.492205603225 13376.188391027914 1.0083667328395727 0.971568659939461 0.9901970679469565 1.04970327788451 0.861388402658305 1.0549596034157473 0.9614295333966375 1.0297238307073042 0.8623215461028653 0.9342341659889639 1.0 13.707379451226199 -8.737797959956891 24.9875349283713 0.9349851420939503 0.9890419180177834 0.16834243340213217 0.057938396794673566 361.451476342175 382031.9977272899 0.011024111329270973 0.012496907239118931 1.8289508725257587e-09 8.737797959956891 0.05405677592383307 ESEEGNPVRGS(ph)EEDS(ph)PKKESK ddPTM_A549_MK2206_60min_R1 2 ESEEGNPVRGSEEDSPKKESK 21 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 ESEEGNPVRGS(0.999)EEDS(0.969)PKKES(0.031)K;ESEEGNPVRGS(1)EEDS(0.975)PKKES(0.025)K 95.823 4.0446999999999997e-07 45167000.0 6688.4 7661.2 6744.700000000001 5592.6 9079.0 7382.6 6277.9 7102.2 10547.5 10054.6 9469.8 True False 7817.238404319785 8051.122356369052 7701.199879293812 6962.787251061355 7743.491126878574 8163.821831826737 7418.513167546159 8108.958599575299 8158.508090896434 7783.258876777028 7118.187306815934 1.0982063364410886 1.1310635712914996 1.081904640514253 0.9781685913763779 1.087845935082923 1.1468961801566486 1.0421913399837979 1.1391887077501688 1.1461496781749974 1.093432715562888 1.0 12.797294180850484 -10.997055732368654 1.2978796625139257 1.000427101506965 1.0985559828889981 0.003714461384225598 0.05496226109879724 0.414751084552419 1.252288167729747 0.0353325603662144 0.00821806058441172 1.0068024590905564e-11 10.997055732368654 0.09812888138203313 ESEEGNPVRGS(ph)EEDS(ph)PKKESK ddPTM_A549_PD325901_60min_R1 3 ESEEGNPVRGSEEDSPKKESK 21 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 ESEEGNPVRGS(1)EEDS(1)PKKESK;ES(0.012)EEGNPVRGS(0.987)EEDS(0.842)PKKES(0.159)K;ESEEGNPVRGS(1)EEDS(0.999)PKKES(0.001)K 132.69 4.765e-18 132356000.0 14988.199999999999 15329.3 16588.6 15963.599999999999 19766.9 17139.3 17794.2 19374.6 17521.4 18170.4 19338.300000000003 True False 16509.79103027033 16621.153909183035 17714.402151355393 16949.635316033924 18378.541136103 16999.723223316807 18471.36801835985 18988.158403920323 16785.036490309813 17023.11784302014 16959.811695583892 0.9734654680493451 0.9800317484368627 1.044492855776694 0.9993999709588393 1.083652428811372 1.0023533001692058 1.0891257727330514 1.1195972422774354 0.9896947437618314 1.0037327152313096 1.0 14.049832531328189 -3.7566954065478972 14.537159979852524 1.014846128126963 0.5189430295174446 0.0 0.048988921918519814 0.0 0.0 0.006728337880686938 0.0 0.0001751074378169421 3.7566954065478972 -0.4959030986095183 ESEEGNPVRGSEEDS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ESEEGNPVRGSEEDSPK 17 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.012)EEGNPVRGS(0.132)EEDS(0.857)PK;ESEEGNPVRGS(0.007)EEDS(0.993)PK 56.528999999999996 0.0025843000000000003 6638300.0 1438.1399999999999 1553.71 1304.76 1357.58 2050.6 1851.01 1332.1599999999999 1474.71 2465.1 1854.17 1895.96 True False 1680.8628728527676 1632.7872025680258 1489.7945875290814 1690.1871609440816 1748.9594564133943 2046.8826495990031 1574.1962282416548 1683.754658609964 1906.758785955801 1435.3117092230084 1425.140806165995 1.1794363515382964 1.145702372357616 1.045366591906818 1.1859790651080515 1.227218706282474 1.4362669574423723 1.1045899615187207 1.181465474376324 1.337944136962498 1.0071367706355807 1.0 10.4768887515337 -4.787909390506241 15.421453920356225 1.1752846880046934 8.942933953372805 0.0 0.12762500784197878 6392.076234469481 463001.10599990404 0.019361852388606722 6745.241604945804 1.6296359980234977e-05 4.787909390506241 7.767649265368111 ESEEGNPVRGSEEDS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ESEEGNPVRGSEEDSPK 17 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEEGNPVRGS(0.213)EEDS(0.786)PK 57.00899999999999 0.0023656999999999997 2834500.0 875.11 881.27 854.62 1111.6 1054.5 981.19 884.41 811.15 1089.2 924.51 1076.5 True False 963.9505229780676 955.5377157173334 912.6196524475455 1180.2610073732308 980.4355578275107 973.1995139525079 918.0667065177221 794.9709769151355 1043.4247117950295 866.1362808221368 944.0973244957446 1.0210287625726795 1.012117809175764 0.9666584458704914 1.2501476031654093 1.0384899230078581 1.0308254124883864 0.9724280354338195 0.8420434591738096 1.1052088431161873 0.9174226622077889 1.0 9.882791780643508 -6.987505707837504 24.998010381623846 1.0262687189721087 1.0635794304905803 0.03510227967088919 0.09736893288426467 819.8731310259353 1640354.51142003 0.014119772908530448 0.02667464302785571 1.0291870007256165e-07 6.987505707837504 0.03731071151847165 ESEEGNPVRGSEEDS(ph)PKK ddPTM_A549_MK2206_60min_R1 4 ESEEGNPVRGSEEDSPKK 18 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEEGNPVRGSEEDS(1)PKK;ESEEGNPVRGS(0.003)EEDS(0.997)PKK;ESEEGNPVRGS(0.038)EEDS(0.962)PKK;ES(0.002)EEGNPVRGS(0.011)EEDS(0.987)PKK 105.16 1.7807e-09 319561000.0 40813.2 53922.9 56316.899999999994 51193.899999999994 76873.9 53982.899999999994 57302.0 50574.0 87232.5 75842.1 81200.1 True False 47701.47037306145 56667.345286672185 64303.4832508787 63736.40779818147 65565.8511442394 59695.33464705107 67713.03167089794 57743.01937637928 67474.47803167798 58709.31693537391 61035.874161247826 0.7815316980148619 0.9284268647806267 1.0535358776217136 1.044245022686154 1.0742182699149034 0.9780368589355296 1.1093972618793013 0.9460505017726246 1.1054888450261284 0.9618821347634426 1.0 15.897369823237582 -5.423413584384986 2.204555498417626 1.0447380458433113 0.7562534599172771 0.6439611688382056 0.05430083109793863 0.1806390831566851 1.2660153225679156 0.007021615362715737 0.08825643271161458 3.772127950849767e-06 5.423413584384986 -0.2884845859260342 ESEEGNPVRGSEEDS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 ESEEGNPVRGSEEDSPKK 18 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEEGNPVRGSEEDS(1)PKK;ESEEGNPVRGSEEDS(1)PKK 110.9 7.1833e-10 82365000.0 16322.1 18524.5 19791.0 19180.2 21196.0 21267.1 21052.0 22045.0 21073.0 21505.0 23690.0 True False 17979.107576305054 20085.624626738398 21134.13627295099 20364.9173926053 19707.26608223036 21093.907788684533 21853.145380096426 21605.295181032056 20187.37509333149 20147.17062993373 20776.28018328305 0.8653670155435886 0.9667574969892655 1.0172242618269982 0.9802003637297528 0.9485464148720503 1.0152879920081677 1.0518314725886226 1.0399019935443519 0.9716549312602455 0.9697198176093376 1.0 14.342649754603869 -5.292984206968874 3.1000159318763236 0.9947431828357864 0.850011518732712 0.6232006775269334 0.02987943403128275 0.17100430342489423 2.5479585790892765 0.004305640620703644 0.0577440932726246 5.093493931082325e-06 5.292984206968874 -0.14473166410307448 ESEEGNPVRGSEEDS(ph)PKKESK ddPTM_A549_MK2206_60min_R1 4 ESEEGNPVRGSEEDSPKKESK 21 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEEGNPVRGS(0.008)EEDS(0.988)PKKES(0.003)K;ESEEGNPVRGS(0.005)EEDS(0.994)PKKES(0.002)K;ESEEGNPVRGS(0.038)EEDS(0.958)PKKES(0.004)K;ESEEGNPVRGS(0.015)EEDS(0.985)PKKESK 158.61 4.7558e-28 1109560000.0 16313.4 17919.300000000003 19087.6 14586.300000000001 21878.3 16889.4 14883.4 12294.0 28648.0 28108.9 29462.300000000003 True False 19066.703095662695 18831.315830481384 21794.508698090132 18159.9441548039 18660.031052008755 18676.625097723634 17587.5211261499 14036.712148795954 22159.273741455436 21759.07996752112 22145.997791886122 0.8609547998170747 0.850325914752002 0.9841285501290545 0.8200102034444058 0.8425915701502256 0.843340872388527 0.7941625069877699 0.6338261333132952 1.0005994739859578 0.982528769848123 1.0 14.43475837911979 -8.904361752779637 23.19655856659724 1.0003381032846266 0.8330273642837607 0.4755358173721087 0.07733547837667892 5.363043925822361 1295.5423752976749 0.01347238469369531 0.014342381762378379 1.2463449181088739e-09 8.904361752779637 -0.1673107390008659 ESEEGNPVRGSEEDS(ph)PKKESK ddPTM_A549_PD325901_60min_R1 4 ESEEGNPVRGSEEDSPKKESK 21 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEEGNPVRGS(0.003)EEDS(0.995)PKKES(0.002)K;ESEEGNPVRGS(0.011)EEDS(0.989)PKKESK;ESEEGNPVRGS(0.002)EEDS(0.993)PKKES(0.006)K;ESEEGNPVRGS(0.003)EEDS(0.997)PKKESK 185.7 5.6306e-45 1776020000.0 27447.3 23995.4 31454.4 26277.300000000003 28873.5 35086.3 33497.7 35495.2 32334.0 33840.2 33287.7 True False 30233.729690365693 26017.57656986364 33589.08473467278 27900.389140921758 26845.52496816749 34800.568805625684 34772.473304144776 34787.220390554285 30975.114424513857 31703.523996795353 29193.523928116123 1.0356313874546592 0.891210551830855 1.1505662974219881 0.9557047381337559 0.9195712389593609 1.1920646815819809 1.1911022934321265 1.1916074426715886 1.0610269079123364 1.0859779749392249 1.0 14.833360747524441 -5.752801034185929 24.9992827920087 1.0558397484003395 0.9634210148327147 0.1350042682690794 0.0987822778003714 329.8167442513142 954463.9524584163 0.014141830619527007 0.05310059602364224 1.7668470910539456e-06 5.752801034185929 -0.09241873356762476 ESEIT(ph)DEDIDGILER ddPTM_A549_PD325901_60min_R1 1 ESEITDEDIDGILER 15 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 ES(0.116)EIT(0.884)DEDIDGILER 49.928999999999995 0.025720999999999997 320060.0 200.94 108.84 0.0 0.0 224.12 0.0 0.0 0.0 0.0 200.92 0.0 True False 221.33928087579034 118.01232877401326 0.0 0.0 208.37858437202613 0.0 0.0 0.0 0.0 188.23387691077826 0.0 0.0 ESEITDEDIDGILER ddPTM_A549_MK2206_60min_R1 1 ESEITDEDIDGILER 15 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 0 56.783 0.032057 321140.0 117.92 0.0 204.52 127.39 199.48 105.14 231.04 0.0 0.0 181.74 270.87 False True 137.82201313279546 0.0 233.52401134419185 158.60055571875438 170.13675624955806 116.26584501371647 273.0169773697997 0.0 0.0 140.68480777608826 203.60550336831122 0.6769071113145846 0.0 1.146943513220071 0.7789600629402176 0.8356196342187764 0.5710348840787369 1.3409115807440966 0.0 0.0 0.6909676086780284 1.0 7.669632747135616 -8.278092702985715 24.953053001418592 0.4750000359697917 0.7455265356629851 0.13052463645336687 0.41443680805804695 1884.6823020142526 2823968.8877165583 0.08095515413416444 0.09800642591343574 5.2711733278547524e-09 8.278092702985715 0.2705264996931934 ESEITDEDIDGILER ddPTM_A549_PD325901_60min_R1 1 ESEITDEDIDGILER 15 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 0 51.092 0.033438999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ESELT(ph)DEDITTILER ddPTM_A549_PD325901_60min_R1 1 ESELTDEDITTILER 15 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 ESELT(1)DEDITTILER 102.28 7.075e-06 1214600.0 508.16 448.88 632.38 530.18 682.11 868.5 550.96 652.41 588.75 691.84 530.26 True False 559.7480291123801 486.7086929444968 675.2971096098603 562.9280144738568 634.2009467517526 861.4272239502567 571.9270842968803 639.397170744256 564.0068849332757 648.1571043298472 465.0413815950891 1.203652086170155 1.046592222126747 1.4521226203431516 1.2104901558287504 1.3637516398571825 1.8523668173261627 1.229841272050186 1.3749253207340981 1.212810100896259 1.393762211239508 1.0 8.861215289577544 -9.556496286752756 0.9069615312543304 1.0368205593080744 1.3440680326956793 0.0 0.22284402375880877 0.464766959725565 0.8073496369341538 0.06231826404048043 0.0418514510599206 2.776538585597042e-10 9.556496286752756 0.30724747338760494 ESELTDEDIT(ph)TILER ddPTM_A549_PD325901_60min_R1 2 ESELTDEDITTILER 15 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 ESELTDEDIT(0.991)T(0.009)ILER;ESELTDEDIT(0.988)T(0.012)ILER 133.14 2.084e-09 3106200.0 858.6099999999999 545.83 782.27 884.1800000000001 691.34 915.04 840.55 1058.19 893.26 713.47 774.99 True False 945.7754551247251 591.8290096905516 835.3595463716524 938.7937904815255 642.7826633935239 907.5882176205454 872.5375902166085 1037.0835703160037 855.7193885953252 668.4213824384484 679.6711430663796 1.3915192145098274 0.8707578889115071 1.229064312783495 1.381247092889802 0.945725988150047 1.335334340554615 1.2837643603347637 1.5258608238642224 1.2590197440701878 0.9834482297171288 1.0 9.408693061097892 -10.579785170703113 1.0449816544041493 1.0098690956349485 1.2397388646812788 0.22267398256615234 0.1813352951372821 0.6298128372436395 1.2980178995816931 0.09595684583238814 0.031420686572130166 2.6315694093129262e-11 10.579785170703113 0.22986976904633027 ESEPAPAS(ph)VTALTDAR ddPTM_A549_MK2206_60min_R1 2 ESEPAPASVTALTDAR 16 0 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 ESEPAPAS(0.817)VT(0.097)ALT(0.085)DAR;ESEPAPAS(0.909)VT(0.045)ALT(0.045)DAR 77.75399999999999 0.00040316 2984200.0 1283.29 1062.16 1420.48 1812.36 1704.67 1619.47 1391.76 1542.55 2473.3 2090.06 2172.37 True False 1499.8779785717868 1116.2194071478289 1621.9254235976805 2256.3882813599316 1453.915301162694 1790.841240482817 1644.6247767667605 1761.21118636125 1913.1014990485103 1617.9139943902874 1632.9105746380844 0.918530384864595 0.683576568419998 0.9932726560712986 1.3818198720772163 0.8903826846028831 1.0967172779071115 1.007173817299378 1.0785717317995824 1.1715898768507436 0.9908160431558716 1.0 10.673230069402004 -5.954199458870626 7.579570928502272 1.0844168812689203 0.8075970343887846 0.39957744761907565 0.12915685359673218 0.1501875756699158 20.710075544290927 0.0166661856175031 0.05211872325315914 1.111221258345593e-06 5.954199458870626 -0.2768198468801357 ESEPAPAS(ph)VTALTDAR ddPTM_A549_PD325901_60min_R1 1 ESEPAPASVTALTDAR 16 0 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 ESEPAPAS(0.94)VT(0.059)ALTDAR 131.96 3.9100000000000005e-10 1782800.0 680.62 907.5 615.18 982.72 971.21 755.02 577.95 668.71 746.91 681.5 878.37 True False 749.7160413540385 983.9782098715266 656.929814177858 1043.4203824809474 902.9955600926095 748.8713674460828 599.9442035163747 655.3720544571537 715.5199701494913 638.4699736944827 770.3360584461934 0.9732324394450046 1.2773362989865231 0.8527834144268392 1.354500248353399 1.1722099078602097 0.9721359388999575 0.7788084134689117 0.8507612324146842 0.9288413313959768 0.8288200541751983 1.0 9.589344147381077 -7.337997927231942 5.663724008080494 0.9399063815663504 1.1316190747203496 0.37433185893026577 0.14328680495268178 0.2092979094549726 11.809125951221901 0.020106619528848804 0.03240883726705015 4.592002044678566e-08 7.337997927231942 0.1917126931539992 ESEPAPASVTALT(ph)DAR ddPTM_A549_PD325901_60min_R1 1 ESEPAPASVTALTDAR 16 0 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 ESEPAPAS(0.186)VT(0.352)ALT(0.462)DAR 69.108 0.001884 1927800.0 660.06 829.87 480.91 639.36 693.0 753.26 769.43 508.75 604.43 454.95 849.64 True False 727.0688052895101 899.8060573290184 513.5474445467564 678.8518151080867 644.3260707202131 747.1257003025571 798.7110796982511 498.6025821433458 579.0279090619443 426.2243793577474 745.1396663117185 0.9757483572017374 1.20756698107734 0.6891962242309634 0.9110396960455179 0.8647051014066784 1.0026653177660894 1.0718944592652 0.6691397662552601 0.7770729907964882 0.5720060260212245 1.0 9.541367054289498 ESEPES(ph)PMDVDNSK ddPTM_A549_MK2206_60min_R1 4 ESEPESPMDVDNSK 14 0 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 ES(0.024)EPES(0.969)PMDVDNS(0.008)K;ES(0.005)EPES(0.995)PMDVDNSK;ESEPES(1)PMDVDNSK;ESEPES(1)PMDVDNSK 105.14 2.1952e-05 11656600.0 3807.79 3645.8900000000003 3528.29 2958.52 4508.719999999999 3613.87 3610.359999999999 4113.26 4179.39 3961.5800000000004 4660.3 True False 4450.451860472587 3831.450228144722 4028.6545764991115 3683.357532813011 3845.493260665267 3996.287324707243 4266.315678743201 4696.327201330444 3232.7648381144027 3066.6563265632 3503.0188922632274 1.2704618494356001 1.0937566556112126 1.1500521979475486 1.0514809214840604 1.0977654928320337 1.1408123814386069 1.2178968512461614 1.3406514054785028 0.9228511000195551 0.8754324258245428 1.0 11.774383053476049 -8.791620479976968 24.999991069290015 0.9635685372493019 1.1613466724099708 0.60164055704427 0.0848732543988289 111.39890420057542 92274.83855687287 0.01458901300429049 0.015532166107965904 1.6157699244683562e-09 8.791620479976968 0.1977781351606689 ESEPES(ph)PMDVDNSK ddPTM_A549_PD325901_60min_R1 1 ESEPESPMDVDNSK 14 0 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 ES(0.004)EPES(0.996)PMDVDNS(0.001)K 53.376999999999995 0.0071068 3050200.0 1156.0 1030.0 1255.9 1572.3 1239.3 1417.6 1284.1 1233.4 1364.5 1606.0 1604.0 True False 1273.356268997778 1116.801714785314 1341.1329263402115 1669.417400047616 1152.2558433529 1406.0555356037823 1332.967128186482 1208.7988694164176 1307.1548101765688 1504.596885918325 1406.718168593752 0.9051964333912803 0.7939058012606339 0.953377127190229 1.1867461708527411 0.8191092352953476 0.9995289511397781 0.9475722699444507 0.859304227672564 0.9292229526567407 1.069579479038377 1.0 10.458117602931194 ESEQES(ph)EEEILAQK ddPTM_A549_MK2206_60min_R1 2 ESEQESEEEILAQK 14 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 ESEQES(1)EEEILAQK;ES(0.002)EQES(0.998)EEEILAQK 87.18 8.1169e-05 8116800.0 1110.0900000000001 830.58 678.33 842.58 1027.7 893.19 859.25 969.17 1335.49 899.98 1120.85 True False 1297.4460529052315 872.8529743059839 774.5273939717664 1049.0121378248539 876.5266913859577 987.7067729484634 1015.3646026878479 1106.5528154586443 1033.0036473393009 696.6738929367442 842.5120111137137 1.5399733603680523 1.0360124992783932 0.9193072428106055 1.2451005136866458 1.0403729321642312 1.1723355393388601 1.2051633558857409 1.3133970802337833 1.2260996089228176 0.8269008438417553 1.0 9.718553443725803 -10.810723636077874 1.1084384089356867 1.002033578361228 1.1795674514348793 0.25985641867393594 0.1642300962671716 0.7351252003949018 1.6320580348334743 0.09786556260601637 0.025510743026524736 1.5462380773739916e-11 10.810723636077874 0.17753387307365132 ESEQES(ph)EEEILAQK ddPTM_A549_PD325901_60min_R1 2 ESEQESEEEILAQK 14 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 ESEQES(1)EEEILAQK;ESEQES(1)EEEILAQK 173.36 1.099e-22 12492800.0 1559.99 1711.46 1485.19 1506.98 1889.56 1477.4899999999998 1488.56 1725.1599999999999 1514.6399999999999 1408.0 1902.3899999999999 True False 1718.3590363960589 1855.6907405693914 1585.9839245729906 1600.062732000101 1756.8438242281177 1465.4578113002483 1545.2079653712872 1690.7503304381617 1450.9849481024821 1319.098639709216 1668.408090243809 1.0299392855047533 1.1122523029112226 0.9505971194021401 0.9590355868906626 1.0530060567923674 0.8783569318979368 0.9261570801574581 1.0133913521068383 0.8696822777276546 0.7906330875657961 1.0 10.704256497762067 -5.930260625176194 0.8744904533526149 0.9416909096688811 1.087025437741294 0.2919843225798556 0.07434287747534121 0.9781493024138451 0.9644415360818024 0.010281681271446253 0.10860658539036633 1.1741926967524235e-06 5.930260625176194 0.14533452807241287 ESEQES(ph)EEEILAQKK ddPTM_A549_MK2206_60min_R1 1 ESEQESEEEILAQKK 15 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 ES(0.025)EQES(0.975)EEEILAQKK 85.146 5.5358e-05 5806300.0 2869.4 3256.3 3094.7 3062.7 3755.5 3485.9 3047.5 2705.4 4585.0 3703.0 4834.4 True False 3353.6845699053865 3422.0317612181575 3533.574994655146 3813.061637489826 3203.070924880767 3854.775624246856 3601.1913025210533 3088.8987349400186 3546.504820740477 2866.489728154808 3633.8850573476716 0.9228923086392832 0.941700606159474 0.972395917562197 1.0493071677597126 0.8814453055977091 1.060786338426568 0.9910030850424089 0.8500265380420613 0.975954044988156 0.7888223438324776 1.0 11.827297071373055 -7.4821674234263424 0.005349021655627686 1.9344431054331592 4.16063582136223e-06 0.0 0.08654522585025554 16865.973145114796 35.03475409563031 6246.2204781029595 6422.87778482387 3.294826699191304e-08 7.4821674234263424 -1.9344389447973378 ESES(ph)EEAEAGAAELR ddPTM_A549_MK2206_60min_R1 1 ESESEEAEAGAAELR 15 0 Q8NAF0 Q8NAF0 ZNF579 Zinc finger protein 579 1 ES(0.015)ES(0.985)EEAEAGAAELR 59.898 0.0058015 2033400.0 151.83 224.57 155.78 177.16 233.88 241.25 0.0 213.95 343.57 349.3 193.14 True False 177.45519211289295 235.9996537839761 177.87194644630458 220.56420795301455 199.4765618189626 266.77891487121076 0.0 244.27806769439525 265.75194356855064 270.39288740061414 145.1780076071755 1.2223283335934287 1.6255881842830284 1.2251989772968421 1.5192673572833428 1.3740136340671436 1.8375986781211695 0.0 1.6826106909757708 1.8305248015775617 1.8624920665135913 1.0 7.181679111984855 -11.223874855631852 1.696603291933674 1.0002391455545443 1.4349162269701445 0.0 0.5464944103696058 0.7441844643834532 3.865490026616853 0.3526737781611748 0.07308513962080032 5.972073504085173e-12 11.223874855631852 0.43467708141560024 ESES(ph)EEAEAGAAELR ddPTM_A549_PD325901_60min_R1 1 ESESEEAEAGAAELR 15 0 Q8NAF0 Q8NAF0 ZNF579 Zinc finger protein 579 1 ES(0.098)ES(0.902)EEAEAGAAELR 65.472 0.0037211999999999996 2231500.0 262.86 190.27 205.17 212.11 277.28 118.89 200.88 203.88 190.3 329.35 208.75 True False 289.5453536926955 206.30472065262305 219.09406998743634 225.2115529632387 257.8048093640702 117.92179925785388 208.52459832575377 199.81345345923407 182.30235278607617 308.5547847927773 183.07507337527795 1.5815662304784037 1.1268859099661679 1.1967444062596362 1.2301595668438539 1.4081917576818712 0.6441171759965973 1.1390114147233354 1.0914290502543993 0.9957792146415377 1.6854003065741436 1.0 7.516291563837689 -2.0000000000027884 0.344986666580257 0.9939781475901539 6.541838088664387 0.021331227214049453 0.27274323147322743 36.193471651818676 0.4464337426027422 0.04407592051619312 132.01519583128228 0.009999999999935795 2.0000000000027884 5.5478599410742335 ESESALMEDRDES(ph)EVSDEGGSPISSEGQEPR ddPTM_A549_MK2206_60min_R1 1 ESESALMEDRDESEVSDEGGSPISSEGQEPR 31 1 O14976-2;O14976 O14976-2 GAK Cyclin-G-associated kinase 1 ES(0.077)ES(0.073)ALMEDRDES(0.423)EVS(0.423)DEGGS(0.004)PISSEGQEPR 43.066 0.010563 4859200.0 314.53 305.68 248.09 151.19 492.83 502.73 351.78 400.24 337.57 300.24 350.0 True False 367.6149744798013 321.23780633515537 283.272892501372 188.23155678717697 420.3353598479532 555.9285549148345 415.6938724859246 456.9752456835933 261.1109339885195 232.415575474264 263.0853404914125 1.3973221533101756 1.221040312375904 1.0767338536318727 0.7154771772367952 1.5977148672093098 2.1131111063673305 1.5800723510837102 1.736984830967842 0.9924951861658081 0.8834227518726014 1.0 8.039387051393074 -8.795270594679764 24.19904989684102 0.9964558033430829 1.4206506328344233 0.2686502698395685 0.3444465304552844 148.72457093548414 106380.0820244636 0.06493674772063976 0.06913175551892464 1.6022467720875102e-09 8.795270594679764 0.42419482949134035 ESESALMEDRDES(ph)EVSDEGGSPISSEGQEPR ddPTM_A549_PD325901_60min_R1 1 ESESALMEDRDESEVSDEGGSPISSEGQEPR 31 1 O14976-2;O14976 O14976-2 GAK Cyclin-G-associated kinase 1 ES(0.001)ES(0.004)ALMEDRDES(0.477)EVS(0.477)DEGGS(0.033)PIS(0.004)S(0.004)EGQEPR 45.47 0.0048979 6937500.0 279.99 236.49 244.86 0.0 142.68 259.72 185.97 226.37 356.0 363.15 269.38 True False 308.41437868225586 256.4198422617271 261.47767206279497 0.0 132.65864901927847 257.6049264298917 193.0471901166887 221.8548727661704 341.0385580233482 340.22064702443316 236.24796774051427 1.3054689173919432 1.0853843303463624 1.1067933179005884 0.0 0.5615229213949712 1.0904006027803594 0.8171379926058215 0.9390763225944331 1.4435618696958776 1.4400997827761994 1.0 7.8841581087664565 -8.578607223516956 7.6759196637149385 1.2092542196519254 0.8391564240326681 0.22427432673937775 0.3498904451857198 0.314609561306132 37.339775223172765 0.06328082242358317 0.0718217391723808 2.638716765799099e-09 8.578607223516956 -0.37009779561925726 ESESALMEDRDESEVS(ph)DEGGSPISSEGQEPR ddPTM_A549_MK2206_60min_R1 3 ESESALMEDRDESEVSDEGGSPISSEGQEPR 31 1 O14976-2;O14976 O14976-2 GAK Cyclin-G-associated kinase 1 ESESALMEDRDES(0.041)EVS(0.95)DEGGS(0.008)PISSEGQEPR;ES(0.001)ES(0.001)ALMEDRDES(0.212)EVS(0.765)DEGGS(0.016)PIS(0.002)S(0.002)EGQEPR;ESESALMEDRDES(0.069)EVS(0.917)DEGGS(0.01)PIS(0.003)S(0.001)EGQEPR 79.018 2.4265999999999998e-06 13927500.0 661.0799999999999 445.09000000000003 932.97 313.98 1049.04 535.6600000000001 794.37 812.03 1611.1399999999999 1435.5500000000002 1029.03 True False 772.6541421457632 467.7431798669007 1065.2791749647506 390.9051140950979 894.7276056548844 592.3431856576691 938.6967465081706 927.1377392375786 1246.2193624618992 1111.2582579672253 773.4934512167952 0.9989149112126139 0.6047151131416643 1.3772310202354558 0.5053761133725937 1.156735851153457 0.7658024573134321 1.213580729134153 1.1986368310928595 1.6111569664894398 1.436674423318112 1.0 9.5952452669215 -7.88251791983603 5.368540181091158 1.2861908055666968 0.9040292190642921 0.3489074556187274 0.2668741182213272 0.21361999713230925 9.298522966440675 0.045745585128525605 0.06366627745885041 1.3106359618583493e-08 7.88251791983603 -0.3821615865024047 ESESALMEDRDESEVS(ph)DEGGSPISSEGQEPR ddPTM_A549_PD325901_60min_R1 2 ESESALMEDRDESEVSDEGGSPISSEGQEPR 31 1 O14976-2;O14976 O14976-2 GAK Cyclin-G-associated kinase 1 ESESALMEDRDES(0.035)EVS(0.956)DEGGS(0.008)PISSEGQEPR;ESESALMEDRDES(0.117)EVS(0.857)DEGGS(0.019)PIS(0.003)S(0.003)EGQEPR 99.25 1.2434e-10 9621800.0 550.29 467.37 499.06 366.89 599.48 815.34 380.90999999999997 484.18 609.85 552.56 688.38 True False 606.1550356979131 506.7569101351578 532.929212691573 389.5519620323539 557.3745928937274 808.7001413651157 395.40573849195005 474.5226500681378 584.220125310502 517.6712672995204 603.7136240003539 1.0040439897337117 0.839399493384401 0.8827516748094135 0.6452595179997554 0.9232433570082902 1.339542639449597 0.6549557982009666 0.7860061976468824 0.9677106861351195 0.8574781928380284 1.0 9.23772054857977 -8.967133930257331 20.38711429136567 0.9857552277556203 0.8832645722480839 0.004606166803920231 0.1812051721626753 53.93520564720956 33457.27330621438 0.030590512370385344 0.03229131854220038 1.0786140416662169e-09 8.967133930257331 -0.10249065550753644 ESESEAKVDGETAS(ph)DSESR ddPTM_A549_MK2206_60min_R1 2 ESESEAKVDGETASDSESR 19 1 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 ESESEAKVDGET(0.236)AS(0.758)DS(0.006)ESR;ESESEAKVDGET(0.006)AS(0.982)DS(0.011)ES(0.001)R 100.79 6.9312e-10 31634000.0 2150.06 2155.71 1906.4 1851.0 3028.5 1970.28 2320.61 1840.42 3117.7 2365.83 2474.6 True False 2512.937564079869 2265.42643121813 2176.7561863219607 2304.4950830945468 2583.01166182969 2178.7737218339867 2742.2347985376164 2101.3051710498676 2411.5459279438555 1831.3873598597047 1860.0885245144261 1.3509774029361685 1.2179132344303434 1.1702433285481402 1.238916886332672 1.388649856062083 1.171327973437583 1.4742496189816952 1.1296801971284731 1.2964683648985935 0.9845700006873523 1.0 10.861155567736716 -10.764362809745732 0.7206826007043428 0.9737666449843718 1.271822181515577 0.5423019095769642 0.09852153799609506 0.5383805549332539 0.42390062778139487 0.09808089080009265 0.01775379085040698 1.720430726114362e-11 10.764362809745732 0.2980555365312052 ESESEAKVDGETAS(ph)DSESR ddPTM_A549_PD325901_60min_R1 2 ESESEAKVDGETASDSESR 19 1 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 ESESEAKVDGET(0.21)AS(0.778)DS(0.012)ESR;ESESEAKVDGET(0.008)AS(0.949)DS(0.043)ES(0.001)R 184.26 5.7539e-44 32695000.0 3183.4 3509.2999999999997 3295.6 3106.4 3626.1000000000004 2925.4 3052.1 3250.7 3448.6000000000004 4014.0 3115.8999999999996 True False 3506.576424504782 3805.0410268894193 3519.259234052715 3298.275272853729 3371.4152453658917 2901.576512313279 3168.249335673203 3185.8622383751826 3303.667334829545 3760.5553549664737 2732.6640533175005 1.2832080182881387 1.3924291287361266 1.2878492069964746 1.2069816151932642 1.2337466953806255 1.061812376384399 1.1593994994836245 1.1658448225670082 1.2089548039462943 1.3761498968016561 1.0 11.416092394210883 -2.0000000000425935 0.025570673750914756 2.5010322460531324e-11 2.8842979168800285 0.0 0.1208077127259723 657.1799643449123 1.25645724986337 47.88387683013247 104.03203891964878 0.009999999999019248 2.0000000000425935 2.8842979168550182 ESESEDS(ph)SDDEPLIK ddPTM_A549_PD325901_60min_R1 1 ESESEDSSDDEPLIK 15 0 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;P35659-2 A0A494C198 DEK Protein DEK 1 ES(0.002)ES(0.009)EDS(0.961)S(0.029)DDEPLIK 97.551 1.4332000000000001e-05 1085200.0 437.35 412.53 570.2 515.41 585.91 648.06 337.81 569.93 521.18 870.63 614.2 True False 481.7494500399469 447.2953508741607 608.8972008911448 547.2457051189607 544.7577028797687 642.7824142236083 350.665544406725 558.5622990485646 499.27661705227104 815.6582732173548 538.6572937345906 0.8943524122729442 0.8303894815439998 1.130398136205621 1.0159441104469698 1.0113252140389357 1.1933049486197485 0.650999343154734 1.0369530043415354 0.9268910360253595 1.514243439575979 1.0 9.073223878564788 -6.020212266574883 0.002091198927897328 1.609942717854415 0.3178713722823467 0.0 0.21448946477964448 1880580.179297998 744.1551624571166 227066.83458987088 232741.02475435028 9.545259361269603e-07 6.020212266574883 -1.2920713455720683 ESESEDSS(ph)DDEPLIK ddPTM_A549_MK2206_60min_R1 1 ESESEDSSDDEPLIK 15 0 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;P35659-2 A0A494C198 DEK Protein DEK 1 ES(0.004)ES(0.006)EDS(0.45)S(0.54)DDEPLIK 69.602 0.0021826999999999997 541300.0 441.35 421.0 337.7 463.42 752.87 553.81 577.25 511.17 874.76 566.89 638.86 True False 515.8390900284878 442.4271017636099 385.5909379568435 576.9579208037144 642.1238203208583 612.4138066106747 682.1288529549724 583.6299128924707 676.6282567046761 438.82915527779596 480.21343036098233 1.0741871372500458 0.9213134697857827 0.8029574218009481 1.2014614426131482 1.3371633938646112 1.2752950415200084 1.4204701697788997 1.2153552482981347 1.4090156874539022 0.9138210794061356 1.0 8.907531942456416 -6.347354735591994 6.772325756828793 1.2321522173022215 0.9325592391440608 0.39961319693741304 0.1574308357988577 0.19446772613263363 12.98434324486754 0.02395066438734462 0.05608671167318209 4.494126207115207e-07 6.347354735591994 -0.29959297815816066 ESESTNS(ph)VR ddPTM_A549_MK2206_60min_R1 1 ESESTNSVR 9 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 ESES(0.025)T(0.021)NS(0.954)VR 67.726 0.0047848 5130200.0 473.53 404.76 409.49 646.61 146.52 103.28 0.0 144.01 239.84 800.5 751.66 True False 553.4502873030242 425.3605551302587 467.56183945498327 805.0294790274264 124.96710209387038 114.20902104828448 0.0 164.42385851212833 185.5166229457788 619.6664940286047 565.0020772393576 0.9795544292637359 0.7528477721862584 0.8275400362057523 1.424825697917538 0.221179898496071 0.2021391170919553 0.0 0.2910146088586357 0.3283467980369681 1.0967508244506665 1.0 9.142112361404163 -6.773823763940457 24.999872827564648 0.5297384282640651 0.9667637801045842 0.3379618767208462 0.35655900606080093 273.20266694332884 551503.7700475217 0.05893932202420388 0.11194597163319306 1.6833570262838347e-07 6.773823763940457 0.43702535184051905 ESESTNS(ph)VR ddPTM_A549_PD325901_60min_R1 2 ESESTNSVR 9 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 ESESTNS(1)VR;ESESTNS(1)VR 141.1 4.0105e-05 23024700.0 2544.9 2659.3999999999996 2540.9 2896.3999999999996 2706.0 2222.8 2876.1 2955.6000000000004 2966.1 2846.2 2958.5 True False 2803.2563745436382 2883.516971165111 2713.3407536729396 3075.3040497983307 2515.9398951932108 2204.698253766991 2985.55155936231 2896.648239376656 2841.445131890598 2666.490446264468 2594.623255476693 1.0804097930697898 1.1113432229818434 1.0457551970004353 1.185260343021679 0.9696744565449344 0.849718065662653 1.1506686194461764 1.116404176699817 1.095128214045302 1.0276985071478408 1.0 11.341309356226288 -10.925271190717048 1.2281887218640717 1.0006334394488061 1.0684088542809869 0.04977148157693956 0.0874514121187953 1.070845498425515 2.91290602422368 0.05954766615353321 0.014611832777282053 1.1877603111248851e-11 10.925271190717048 0.06777541483218075 ESFNPESYELDKS(ph)FR ddPTM_A549_PD325901_60min_R1 2 ESFNPESYELDKSFR 15 1 Q5T5U6;P49903-2;P49903-4;P49903 Q5T5U6 SEPHS1 Selenide, water dikinase 1 1 ESFNPESYELDKS(1)FR;ESFNPES(0.001)YELDKS(0.999)FR 120.92 1.5166e-07 6948300.0 2910.8 2743.5 2573.7 2883.3999999999996 3780.8 2795.3999999999996 3400.6000000000004 3311.6 3590.2 3172.3999999999996 3445.8999999999996 True False 3206.302273182296 2974.704373314089 2748.3667589153606 3061.501069323476 3515.24965105192 2772.6351892119173 3530.0116938797205 3245.5475401000567 3439.31637925681 2972.094122594828 3022.0761453598566 1.0609601211092259 0.9843247589513908 0.9094300165584002 1.013045642157016 1.1631902976532507 0.9174604000197233 1.1680750332183907 1.0739463150468005 1.138064103559267 0.9834610313040022 1.0 11.56132429630615 -6.532908400474179 24.907939286797365 1.0701645901082395 0.9809120809108819 0.15886882888995546 0.07985956402266982 234.74110926146173 582961.9574208102 0.011181480500985327 0.023296512018976777 2.9315114818542365e-07 6.532908400474179 -0.08925250919735761 ESFS(ph)PEEKEEGELIGPVGTGLDSR ddPTM_A549_MK2206_60min_R1 1 ESFSPEEKEEGELIGPVGTGLDSR 24 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 ES(0.203)FS(0.797)PEEKEEGELIGPVGTGLDSR 40.254 0.026568 4355800.0 1073.5 930.53 1238.0 1013.1 1447.6 1197.6 772.02 1173.9 1242.5 1320.2 1715.6 True False 1254.6805554448433 977.8900023850175 1413.5670156664842 1261.3095454797879 1234.659957624124 1324.3292370974589 912.2860408112557 1340.303919917975 961.0757338647854 1021.965903081279 1289.5691718487642 0.9729455254006238 0.7583075214050641 1.0961544727685704 0.9780859941553484 0.9574204971526105 1.0269547892486153 0.7074347469886983 1.0393424014599202 0.7452688501284185 0.7924863011544845 1.0 10.33267344530894 ESFS(ph)PEEKEEGELIGPVGTGLDSR ddPTM_A549_PD325901_60min_R1 1 ESFSPEEKEEGELIGPVGTGLDSR 24 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 ES(0.017)FS(0.983)PEEKEEGELIGPVGTGLDSR 73.797 9.9659e-06 11802000.0 1502.2 2052.2 1551.2 1998.9 2101.8 1588.1 1516.2 1990.3 1778.3 1858.8 2294.9 True False 1654.702238138809 2225.1460961965263 1656.473760123368 2122.3675131687232 1954.1768188163692 1575.1670401328774 1573.8998206964748 1950.6019051398546 1703.5642352048314 1741.4350507752083 2012.641848569702 0.8221543437123374 1.1055847307248639 0.8230345410439283 1.0545182267162927 0.97095110101438 0.7826365337937701 0.7820069039183388 0.9691748715878403 0.8464318857403672 0.8652483560414742 1.0 10.974874750878836 -4.96325906365371 16.810152123470473 0.9243872964789339 0.3983759844360924 0.06621444230045193 0.1043901168429277 16641087.765955685 202528736.7720267 0.014072552026695332 265713515.6780375 1.0882807226924585e-05 4.96325906365371 -0.5260113120428416 ESGADGAST(ph)SPR ddPTM_A549_PD325901_60min_R1 1 ESGADGASTSPR 12 0 O75528-2;O75528 O75528-2 TADA3 Transcriptional adapter 3 1 ESGADGAS(0.049)T(0.475)S(0.475)PR 57.836000000000006 0.014194 1930400.0 189.17 339.2 285.27 292.31 206.18 319.57 295.87 269.75 355.44 346.58 284.15 True False 208.3743991404063 367.7855744225036 304.6301376678654 310.3653248158232 191.698628082386 316.967527873096 307.1294947562765 264.36962463521866 340.5020928758957 324.69687965228707 249.2013513752586 0.8361688168641861 1.4758570625432745 1.2224257051043823 1.2454399749560794 0.7692519604105901 1.2719334230085777 1.2324551735427272 1.060867540148765 1.3663733803881035 1.3029499152408042 1.0 7.961168081640242 -11.195938377721399 1.6328125797563804 1.0001503145746673 1.1987569283280175 0.0 0.22061126107673362 0.680577501550496 3.267967892775501 0.14277788185394794 0.029968429614148733 6.368858825788941e-12 11.195938377721399 0.1986066137533502 ESGADGASTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ESGADGASTSPR 12 0 O75528-2;O75528 O75528-2 TADA3 Transcriptional adapter 3 1 ESGADGAS(0.014)T(0.162)S(0.824)PR;ESGADGAST(0.175)S(0.825)PR 125.97 2.6689e-06 226290000.0 1871.8400000000001 2376.8 1561.34 1389.23 1651.9 1113.26 1099.25 1046.68 1305.66 1800.73 1794.9099999999999 True False 2187.7608299057993 2497.768967866385 1782.7614896936268 1729.5914123649036 1408.9076982586976 1231.0644342778203 1298.9694960775282 1195.0500953230653 1009.9300947105805 1393.9438423386998 1349.184310004117 1.6215433382108657 1.851317829110215 1.321362453205661 1.2819533992057957 1.0442662932052615 0.9124508972936869 0.962781353478358 0.8857574806213235 0.748548650634322 1.0331752541166495 1.0 10.397871730773167 -6.2840641334532314 0.9431124318412046 0.882455383049189 1.7957051780177455 0.8741523603998554 0.11373933467769919 0.16881100814878305 0.24317883094608733 0.01863509996007271 0.10876696111711884 5.199192129729235e-07 6.2840641334532314 0.9132497949685565 ESGADGASTS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ESGADGASTSPR 12 0 O75528-2;O75528 O75528-2 TADA3 Transcriptional adapter 3 1 ESGADGAS(0.003)T(0.165)S(0.832)PR;ESGADGAS(0.024)T(0.14)S(0.836)PR 129.34 8.0368e-08 331570000.0 2192.7 2022.37 2616.3 2127.02 2285.4 2295.7 2164.23 1849.99 2287.5 2607.9 2178.4 True False 2415.301289819574 2192.8022174081316 2793.857851089972 2258.4011945870916 2124.881388201983 2277.0045803369103 2246.5909569620967 1813.0904981609197 2191.364329995531 2443.2367489330004 1910.4706100153546 1.2642441486185239 1.1477811832920621 1.4623924788183564 1.1821177372463954 1.1122292994525078 1.191855330513883 1.1759358899240229 0.9490282073202622 1.1470285481009932 1.2788664406166206 1.0 10.899712348632708 -5.8530055015922064 0.1344679932875318 0.9421136000212573 1.5417796366846483 0.08802110832750076 0.1251173745262452 15.843294199219466 0.414981479278059 0.3848963820887343 1.8142880936021428 1.4027959339929493e-06 5.8530055015922064 0.599666036663391 ESGGSGFRS(ph)PHLWK ddPTM_A549_MK2206_60min_R1 2 ESGGSGFRSPHLWK 14 1 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 ES(0.038)GGS(0.222)GFRS(0.74)PHLWK;ES(0.128)GGS(0.108)GFRS(0.763)PHLWK 71.558 0.00077181 9174300.0 955.44 879.5999999999999 810.24 712.24 1418.88 967.7 1070.88 1183.67 2044.52 1495.47 2034.66 True False 1116.6949137347196 924.3678829246352 925.1442154875708 886.7388319736681 1210.1646315789712 1070.1013716927273 1265.4450343047563 1351.4588473373447 1581.439484427551 1157.6422883509783 1529.3977682407356 0.7301533563889351 0.6043999161761132 0.6049075228818747 0.579796080776084 0.7912687312019699 0.6996880693265713 0.8274139406914371 0.8836542562056476 1.0340275873729559 0.7569268848107532 1.0 10.578747958618404 -8.020936097875841 0.9707830431350672 1.0194889000965641 0.6403932336236362 0.5570770286155796 0.0976208019851408 0.10924161722677636 0.20529677282175765 0.01100363899283286 0.016485061499735998 9.5293636884064e-09 8.020936097875841 -0.3790956664729279 ESGGSGFRS(ph)PHLWK ddPTM_A549_PD325901_60min_R1 2 ESGGSGFRSPHLWK 14 1 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 ES(0.005)GGS(0.069)GFRS(0.926)PHLWK;ESGGS(0.005)GFRS(0.994)PHLWK 69.935 0.0010907 12388800.0 2544.7 1979.3200000000002 2152.4 2323.0 2112.7 2785.0 2341.3999999999996 1901.42 3089.0 2382.7 3146.2 True False 2803.0360706908714 2146.1242428241453 2298.474807432656 2466.4864340842173 1964.3112404193262 2762.3198833638057 2430.5032582632416 1863.4946864648668 2959.180072286858 2232.255915365875 2759.237345405028 1.0158734895926158 0.7777961712493117 0.8330109083440457 0.8939015116592524 0.7119036873324811 1.0011171702803716 0.880860525576305 0.6753658541075322 1.0724630402726303 0.8090119246476792 1.0 11.430053845126848 -8.79373287938592 24.999937859997626 1.0342186979511112 0.8489358310637629 0.06342128992662177 0.1212206813714861 126.92317469945702 98256.71392438501 0.0164470449693846 0.017509848555792473 1.6079299350876694e-09 8.79373287938592 -0.1852828668873483 ESGNDT(ph)IDEEELILPNR ddPTM_A549_MK2206_60min_R1 2 ESGNDTIDEEELILPNR 17 0 Q92576-2;Q92576;D6R9X2;E9PE34;A0A1B0GX99;D6RBF0 Q92576-2 PHF3 PHD finger protein 3 1 ES(0.087)GNDT(0.913)IDEEELILPNR;ES(0.021)GNDT(0.979)IDEEELILPNR 84.874 9.2602e-05 2362460.0 1084.85 1052.66 1071.2 986.65 1883.21 1368.43 967.2 1445.83 1916.24 1650.3000000000002 1928.18 True False 1267.946157963985 1106.23589772561 1223.112267513682 1228.3792942924013 1606.1923036732019 1513.2363543096824 1142.927720360415 1650.7808301686732 1482.2146996064841 1277.496083816872 1449.3596909392338 0.8748319453691397 0.7632583579088859 0.843898360883118 0.8475323979076376 1.108208206502787 1.044072333299855 0.7885742424779036 1.1389724997104838 1.0226686369661344 0.8814210108113408 1.0 10.50119996094936 -6.6567363332678235 7.085604108793494 1.0117604973086458 0.825412489793262 0.40505333966195634 0.09552599565367195 0.1336531748804232 8.081410881436042 0.01164476478074758 0.02432652298390231 2.2042642990138942e-07 6.6567363332678235 -0.18634800751538383 ESGNDT(ph)IDEEELILPNR ddPTM_A549_PD325901_60min_R1 2 ESGNDTIDEEELILPNR 17 0 Q92576-2;Q92576;D6R9X2;E9PE34;A0A1B0GX99;D6RBF0 Q92576-2 PHF3 PHD finger protein 3 1 ES(0.068)GNDT(0.932)IDEEELILPNR;ES(0.005)GNDT(0.995)IDEEELILPNR 133.71 3.355e-12 4331000.0 676.61 698.05 836.66 890.31 995.22 743.9499999999999 699.0999999999999 624.0 910.86 897.17 960.74 True False 745.2989491060441 756.8771233066877 893.4407788452912 945.3024266592851 925.3191805226122 737.891517855836 725.7046330621984 611.5538304814701 872.5797218009745 840.5225330880099 842.575070632645 0.8845490153731211 0.8982904309504302 1.0603693486616617 1.1219207161559 1.0982038429262322 0.8757575954648081 0.8612937391054132 0.7258152440022783 1.0356106562063374 0.997563970717655 1.0 9.718661421119103 ESGNS(ph)QELAR ddPTM_A549_MK2206_60min_R1 2 ESGNSQELAR 10 0 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 ES(0.001)GNS(0.999)QELAR;ES(0.012)GNS(0.988)QELAR 133.15 9.117100000000001e-07 39415000.0 3445.9 3151.8 2600.4 2403.21 3294.0 3386.6000000000004 2692.3999999999996 3007.3 3833.5 4264.9 4238.5 True False 4027.483675833614 3312.2131575737453 2969.1758219217522 2991.9965578841957 2809.4569635354146 3744.967764156858 3181.5742290099042 3433.593984469992 2965.2183708415746 3301.456127898307 3185.9634733510056 1.264133663025802 1.0396268460949898 0.9319553870461561 0.9391182864809197 0.8818233438754461 1.1754584744871195 0.9986223180592574 1.0777254708631445 0.9307132349897124 1.0362504641102572 1.0 11.637514011312678 -5.291923053109678 3.1912119113947135 0.9806867369244637 1.2959204044988668 0.47730071448559064 0.07850130750138494 0.18071480259338682 2.9269044646150157 0.01045286133558766 0.13538459527121807 5.105954576118557e-06 5.291923053109678 0.3152336675744031 ESGNS(ph)QELAR ddPTM_A549_PD325901_60min_R1 2 ESGNSQELAR 10 0 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 ESGNS(1)QELAR;ESGNS(1)QELAR 165.72 2.5125999999999998e-09 44483000.0 6413.6 6107.8 5221.5 5955.7 6530.8 6666.9 5691.6 6923.2 6789.1 6106.1 6586.299999999999 True False 7064.703950557226 6622.525741325963 5575.8623894302245 6323.57006262392 6072.0991380368905 6612.606976803649 5908.196952563024 6785.111344854669 6503.7777367312165 5720.559803926456 5776.226853995658 1.223065528610649 1.146514136082603 0.9653122237699455 1.0947579141995856 1.05122241413295 1.1447969658998818 1.022847111428125 1.174661507652028 1.1259560784445786 0.9903627313337435 1.0 12.495911688020772 -10.794361862263981 1.0462399705370953 1.000091976738408 1.1024676232103368 0.27182366308345385 0.06891419571352846 0.6190852401430822 1.2052370866727113 0.04626989285492166 0.011649578454972677 1.6056028772410236e-11 10.794361862263981 0.10237564647192876 ESGS(ph)PYSVLVDTK ddPTM_A549_MK2206_60min_R1 2 ESGSPYSVLVDTK 13 0 Q9Y2D9;D6RF85 Q9Y2D9 ZNF652 Zinc finger protein 652 1 ES(0.025)GS(0.951)PYS(0.025)VLVDTK;ESGS(0.998)PYS(0.002)VLVDTK 160.84 1.3500999999999998e-18 13016100.0 4127.1 4026.3999999999996 4113.5 4094.5 5432.7 4932.9 4171.0 4363.3 6390.700000000001 6154.299999999999 6502.6 True False 4823.653582092606 4231.326561855106 4696.856154235931 5097.652683809091 4633.557026654172 5454.896203805992 4928.816709701495 4981.811137045828 4943.216653850854 4764.039355653017 4887.824957369882 0.9868711797503061 0.8656870077712366 0.9609296967875236 1.0429286499146886 0.9479793296745775 1.1160170937752338 1.0083865017035452 1.0192286304226654 1.0113325859588018 0.9746747064805951 1.0 12.254976904995445 -6.0191766981290575 7.7408882815010704 1.0121761294827805 0.9229440414195335 0.3559125055371838 0.04751782099352008 0.11900621810202476 37.92762557205175 0.005725493665891742 0.01606872873599258 9.568047041579498e-07 6.0191766981290575 -0.089232088063247 ESGS(ph)PYSVLVDTK ddPTM_A549_PD325901_60min_R1 2 ESGSPYSVLVDTK 13 0 Q9Y2D9;D6RF85 Q9Y2D9 ZNF652 Zinc finger protein 652 1 ES(0.142)GS(0.819)PYS(0.039)VLVDTK;ES(0.015)GS(0.98)PYS(0.005)VLVDTK 140.82 2.8044e-12 12682300.0 6325.2 6322.5 5885.8 6509.299999999999 6361.799999999999 6354.8 6682.5 7410.8 7697.2 6781.200000000001 7573.8 True False 6967.3296476338655 6855.319263815678 6285.245782190634 6911.364677307095 5914.969115018545 6303.048615727225 6936.80619430431 7262.985780339871 7373.7134517340255 6353.033874713165 6642.270614273918 1.0489379388821365 1.0320746717370908 0.9462495804798956 1.0405123607061277 0.8905040848994564 0.9489298135764416 1.0443426046806117 1.09344924380709 1.1101193974073071 0.9564551406654228 1.0 12.697460785870353 -7.882924350321927 6.562695510500598 1.0570900337743978 0.9834286002089352 0.16189836193981366 0.059292128512956 0.2320706729859536 12.560775594655547 0.009369268233798045 0.012992272749071892 1.3094099890270712e-08 7.882924350321927 -0.07366143356546262 ESGSTLDLS(ph)GSR ddPTM_A549_MK2206_60min_R1 2 ESGSTLDLSGSR 12 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ESGSTLDLS(0.988)GS(0.012)R;ESGS(0.002)T(0.002)LDLS(0.94)GS(0.055)R 67.153 0.004918 2732200.0 947.76 861.77 498.04999999999995 705.49 1054.42 928.52 910.4200000000001 910.62 1233.38 1154.1599999999999 1606.63 True False 1107.7187174926921 905.6304120827225 568.6809791217229 878.3350816706492 899.3162147817277 1026.7753700983071 1075.8315293326395 1039.7031736567903 954.0213993031375 893.4344544010677 1207.659430267766 0.9172442906748016 0.7499054695262249 0.47089515874159416 0.7273036252247886 0.7446770109536001 0.8502193121372366 0.8908401676572862 0.8609241542760645 0.7899755306772281 0.7398066309166091 1.0 10.23799794500559 -7.270275833880165 2.044307861795081 0.8942063013420923 0.7025109708178786 0.21621472156005395 0.11660188423342673 0.29017798233630593 2.3647529009046737 0.018864925556556326 0.03442248809104849 5.3669081913287115e-08 7.270275833880165 -0.19169533052421373 ESGSTLDLS(ph)GSR ddPTM_A549_PD325901_60min_R1 1 ESGSTLDLSGSR 12 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ESGSTLDLS(0.556)GS(0.444)R 65.179 0.006034 1892200.0 414.68 631.75 501.36 563.4 762.98 621.83 551.0 491.89 518.31 706.71 620.57 True False 456.7780083287188 684.9897896268183 535.3853045225966 598.1999384257633 709.3909169381071 616.7660226470796 571.9686065187693 482.0788680697601 496.52723317157705 662.0882099921167 544.2438241173475 0.8392892819124215 1.2586082914909178 0.9837232519650221 1.099139598682487 1.3034432096470632 1.1332531400743928 1.050941841088203 0.8857773790113168 0.9123249748894129 1.2165286598628635 1.0 9.08810932109803 -8.037413131074358 4.877430162577356 0.9521677084051314 1.1124917902862759 0.052014631568158554 0.14394742230922686 0.1932782027318811 11.151903814899507 0.018308656232756515 0.024264915645298167 9.174594301106997e-09 8.037413131074358 0.16032408188114444 ESGVAGDPWKEET(ph)DTDLEVVLEK ddPTM_A549_PD325901_60min_R1 1 ESGVAGDPWKEETDTDLEVVLEK 23 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 ESGVAGDPWKEET(0.793)DT(0.207)DLEVVLEK 170.44 9.4016e-41 25352000.0 4441.8 5024.5 4569.9 4461.5 4822.0 5406.3 4365.0 4661.1 5523.3 5691.0 5655.1 True False 4892.728266119662 5447.932248484281 4880.040895041113 4737.076722198336 4483.319354996924 5362.27288525305 4531.112463619652 4568.13070393779 5291.1749087931385 5331.6692887678655 4959.5585506325015 0.9865249530113288 1.098471203206079 0.9839667876123274 0.9551408001008896 0.9039754867749586 1.0811996330941973 0.9136120518310629 0.92107607104572 1.0668640877560251 1.0750290039600214 1.0 12.275995996976537 -8.78173159768162 24.996076499244772 1.0315747016103138 0.9822755429980723 0.1733691230141251 0.062352488819627704 395.65430726453064 487367.4354315917 0.010970516963408138 0.011685597739067912 1.6529830578468739e-09 8.78173159768162 -0.049299158612241545 ESGVAGDPWKEET(ph)DTDLEVVLEKK ddPTM_A549_PD325901_60min_R1 1 ESGVAGDPWKEETDTDLEVVLEKK 24 2 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 ES(0.001)GVAGDPWKEET(0.499)DT(0.499)DLEVVLEKK 56.913999999999994 0.0010344000000000002 3317500.0 692.2 924.81 823.05 796.73 744.21 977.63 575.0 804.37 1221.0 1277.2 899.69 True False 762.4716344292929 1002.7469843209777 878.9071224017129 845.9422025948853 691.9392569851223 969.668505412194 596.8819396520731 788.3262093339418 1169.6856161418764 1196.5573740316847 789.0338336048085 0.9663357918960679 1.270854229076327 1.1139029595046717 1.0721241175807166 0.8769449769015653 1.2289314654380934 0.756471920760529 0.9991031762635149 1.4824277062974707 1.51648424068845 1.0 9.623943353799698 ESGVAGDPWKEETDT(ph)DLEVVLEK ddPTM_A549_MK2206_60min_R1 2 ESGVAGDPWKEETDTDLEVVLEK 23 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 ESGVAGDPWKEET(0.271)DT(0.729)DLEVVLEK;ESGVAGDPWKEET(0.027)DT(0.973)DLEVVLEK 214.74 6.3236999999999996e-74 30050000.0 11741.1 11236.0 8968.400000000001 7654.0 17231.8 12576.1 12769.099999999999 13954.8 18897.2 15663.099999999999 16030.900000000001 True False 13722.710637665063 11807.864407163708 10240.253976820117 9529.23034360112 14697.025046827428 13906.894554660446 15089.0801840924 15932.935634782654 14617.014372627456 12124.794831504614 12049.985099667958 1.1388155689954502 0.9799069716268013 0.8498146588664488 0.7908084752622393 1.2196716365427216 1.1541005602607473 1.2522073728131153 1.322236957390237 1.2130317383571068 1.006208284177772 1.0 13.55674374205046 -6.773394823768886 24.98724077516431 1.1424570363594242 0.9362684568247772 0.433467089860608 0.12279501065507012 195.3768630407266 408343.7985303087 0.02024225250391773 0.03846534493493337 1.6850204509366317e-07 6.773394823768886 -0.20618857953464698 ESGVAGDPWKEETDT(ph)DLEVVLEK ddPTM_A549_PD325901_60min_R1 3 ESGVAGDPWKEETDTDLEVVLEK 23 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 ESGVAGDPWKEET(0.025)DT(0.975)DLEVVLEK;ESGVAGDPWKEET(0.003)DT(0.997)DLEVVLEK;ESGVAGDPWKEET(0.17)DT(0.83)DLEVVLEK 198.4 4.775299999999999e-61 34615000.0 9802.400000000001 9997.6 9888.300000000001 9914.5 9518.0 9835.0 8357.5 8970.3 11203.2 10869.9 12540.3 True False 10797.532431854519 10840.132838580259 10559.37950117837 10526.896147536787 8849.488515317438 9754.907020783854 8675.549235899485 8791.380329435782 10732.368464177445 10183.572658931256 10997.922599511361 0.9817792709628866 0.9856527667381372 0.9601249150132702 0.9571713250650171 0.8046509179570532 0.8869772388848477 0.7888352693339504 0.799367357779585 0.9758541549159735 0.9259542033314285 1.0 13.42494341798826 -8.96792596581469 24.17700361650432 0.9893475066457194 0.8953846751546228 0.14926580782828203 0.07175009067207623 131.62958717874073 99221.60545379978 0.013149386248546351 0.013888692153841007 1.0766487343090883e-09 8.96792596581469 -0.09396283149109652 ESGVAGDPWKEETDT(ph)DLEVVLEKK ddPTM_A549_PD325901_60min_R1 1 ESGVAGDPWKEETDTDLEVVLEKK 24 2 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 ES(0.003)GVAGDPWKEET(0.119)DT(0.879)DLEVVLEKK 61.101000000000006 0.00014901 1826400.0 669.27 671.05 1046.9 905.93 606.9 974.18 809.33 1024.7 844.29 1006.3 1128.2 True False 737.2137977094667 727.60173855018 1117.9489295211151 961.8872385836911 564.2734376913378 966.2466010683501 840.1294960323697 1004.2615546384013 808.8074273975631 942.762046263767 989.4385522490477 0.7450829523811656 0.7353682923475153 1.1298821205015273 0.9721545985824679 0.5702965953860536 0.9765604936981876 0.8490971916575412 1.0149812258231299 0.817440785543579 0.9528252604679872 1.0 9.950466303193776 ESGVLKS(ph)NKK ddPTM_A549_PD325901_60min_R1 1 ESGVLKSNKK 10 2 Q8WV22 Q8WV22 NSMCE1 Non-structural maintenance of chromosomes element 1 homolog 1 ES(0.012)GVLKS(0.988)NKK 40.725 0.019786 9364800.0 3814.2 3799.3 4612.2 3397.1 4864.1 4580.3 4170.3 4003.6 4642.6 4222.0 5020.1 True False 4201.4147761343675 4119.480344644508 4925.21162741168 3606.9311516261273 4522.462396234037 4542.999555393627 4329.003048575721 3923.7450572365606 4447.487667076391 3955.4221994689733 4402.659525035849 0.9542901857940417 0.9356799728025675 1.1186901007003434 0.8192618873013483 1.027211477634581 1.0318761942775112 0.9832700039507306 0.891221552546608 1.0101820596813416 0.8984165541251492 1.0 12.104159563973207 ESGVVAVS(ph)PEKSES(ph)PQKEDGLSSQLK ddPTM_A549_MK2206_60min_R1 2 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 ES(0.006)GVVAVS(0.991)PEKS(0.328)ES(0.674)PQKEDGLSSQLK;ES(0.004)GVVAVS(0.996)PEKS(0.257)ES(0.743)PQKEDGLSSQLK 103.5 1.6635e-12 74885000.0 6946.9 6820.7 6242.3 5631.200000000001 9598.9 7217.8 7016.8 7032.200000000001 10724.2 10744.8 10019.099999999999 True False 8119.3668846015635 7167.844496434811 7127.552004761629 7010.844252794172 8186.914525585941 7981.58280521212 8291.661733069639 8029.035885209283 8295.185823028352 8317.542217412309 7531.080956907171 1.0781144076209728 0.9517683500481806 0.9464181895727143 0.9309213767466061 1.0870835903147833 1.059819015475032 1.1009922454046783 1.0661199808037398 1.1014601848650132 1.1044287353973843 1.0 12.878641238436447 -6.766577191352013 24.99998745901559 1.0576011370555178 0.9728466775105005 0.4776737969650885 0.04694835053787474 103.1214738913887 501780.0273597228 0.007538386549671422 0.01455720243285786 1.7116809160860884e-07 6.766577191352013 -0.08475445954501737 ESGVVAVS(ph)PEKSES(ph)PQKEDGLSSQLK ddPTM_A549_PD325901_60min_R1 1 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 ESGVVAVS(1)PEKS(0.21)ES(0.79)PQKEDGLSSQLK 153.88 1.2556e-34 77438000.0 3880.2 4757.5 4843.5 4853.8 5320.3 5556.7 5480.5 5648.0 5314.7 5915.5 5144.6 True False 4274.115047547732 5158.4312214477 5172.209036331566 5153.608202220393 4946.620482038598 5511.448077518014 5689.063426544671 5535.346209229716 5091.341641367103 5541.9943204544525 4511.846814306374 0.9473094330231179 1.1433081471407909 1.1463618445403077 1.142239179282216 1.0963626837581506 1.221550354954884 1.2609167954252178 1.2268471065280813 1.128438497783932 1.2283205854599581 1.0 12.13950237101755 -10.17678215589624 0.9496187193593324 1.0111333165558263 1.1503292557898002 0.0 0.10211438946374157 0.45331570862369575 0.8108732066553459 0.03462985443192366 0.015452071096698038 6.656069439755195e-11 10.17678215589624 0.1391959392339739 ESGVVAVS(ph)PEKSESPQKEDGLSSQLK ddPTM_A549_MK2206_60min_R1 3 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ESGVVAVS(1)PEKSESPQKEDGLSSQLK;ES(0.001)GVVAVS(0.376)PEKS(0.309)ES(0.309)PQKEDGLS(0.002)S(0.003)QLK;ES(0.051)GVVAVS(0.949)PEKSESPQKEDGLSSQLK 190.14 3.2363000000000006e-58 57665300.0 9027.5 10341.4 10772.8 8815.7 12946.6 9664.3 8811.599999999999 9859.7 13493.4 14368.0 13236.0 True False 10551.12129881539 10867.733088309264 12300.545029379566 10975.546895751806 11042.172290257318 10686.969811356854 10412.553660802141 11257.342669064876 10437.166444532064 11122.258820990617 9949.135904983816 1.0605062991983074 1.0923293431809786 1.2363430499746073 1.1031658427998587 1.1098624439059044 1.0741606018270828 1.046578693893023 1.1314894857779298 1.0490525553383767 1.1179120405239564 1.0 13.280355515873284 -8.946908153462575 0.40279444545750337 0.9966641846635257 1.127458638306262 0.0 0.058439277564176266 0.655035531706469 0.27847171702239204 0.029280798753034784 0.023205281839149904 1.1300348742278955e-09 8.946908153462575 0.13079445364273623 ESGVVAVS(ph)PEKSESPQKEDGLSSQLK ddPTM_A549_PD325901_60min_R1 2 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ESGVVAVS(0.999)PEKSESPQKEDGLSSQLK;ESGVVAVS(1)PEKSESPQKEDGLSSQLK 176.84 4.7911e-49 100452000.0 11380.5 11312.8 11318.7 11615.0 13362.4 13136.900000000001 11399.5 12698.5 12946.0 12445.8 14757.9 True False 12535.839982118701 12266.169358275052 12086.855046872328 12332.43217042108 12423.871121777453 13029.917441925309 11833.314210545757 12445.218455719465 12401.924640927702 11659.970063986488 12942.771858035992 0.9685591401609515 0.9477235242046821 0.933869126292894 0.9528432012624899 0.9599080674564806 1.0067331468749647 0.9142797493721263 0.9615574308367645 0.9582124120674749 0.9008866255142224 1.0 13.659859001331155 ESGVVAVSPEKS(ph)ESPQKEDGLSSQLK ddPTM_A549_PD325901_60min_R1 1 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ESGVVAVS(0.018)PEKS(0.491)ES(0.491)PQKEDGLSSQLK 110.16 3.7311e-13 8512200.0 2345.3 2965.9 2854.8 3325.5 3568.8 2983.2 2753.7 3469.2 3009.5 3062.5 3306.7 True False 2583.3931294813933 3215.846801826955 3048.5438953069797 3530.9085822415245 3318.139799691623 2958.9058082768074 2858.49356038246 3400.004084465247 2883.021180818162 2869.1332273504786 2899.9968628983534 0.8908261807219557 1.1089138898629465 1.0512231700347991 1.2175560006339514 1.1441873755599046 1.0203134514151089 0.9856885008922343 1.1724164698120294 0.9941463101917892 0.9893573555396785 1.0 11.501835624252836 -8.887343987922314 19.26897676369355 0.9972086628883056 1.0771350292146753 0.14359503449272848 0.08600130481492704 2.598799118695043 431.73333700452105 0.014480074810980454 0.01541486878241449 1.2961522320666538e-09 8.887343987922314 0.07992636632636974 ESGVVAVSPEKSES(ph)PQKEDGLSSQLK ddPTM_A549_MK2206_60min_R1 1 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ESGVVAVSPEKS(0.18)ES(0.82)PQKEDGLSSQLK 102.46 1.1905e-12 9441800.0 1840.4 1434.5 2161.1 1679.7 2420.7 1630.5 1370.5 1511.8 2366.5 2559.9 2418.6 True False 2151.01452654 1507.5099227551034 2467.576476217156 2091.226575404598 2064.618236681899 1803.0384277616945 1619.5021099606568 1726.1022796933241 1830.4915285239551 1981.6168120722377 1817.9948700358013 1.1831796458796613 0.8292157187029996 1.3573066221955636 1.1502928912904005 1.1356568000883527 0.9917731108483203 0.8908177556786858 0.9494538780845583 1.0068738689498655 1.0900013221892173 1.0 10.82813241324562 -7.2645207430707694 21.682424266723103 0.9887528071516033 1.1279872579970647 0.24977158861482018 0.12332709815666656 46.08927161281896 324319.8101894481 0.016890644858224124 0.027753336968991016 5.4385015535611313e-08 7.2645207430707694 0.13923445084546138 ESGVVAVSPEKSES(ph)PQKEDGLSSQLK ddPTM_A549_PD325901_60min_R1 2 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ESGVVAVS(0.001)PEKS(0.149)ES(0.85)PQKEDGLSSQLK;ESGVVAVS(0.001)PEKS(0.019)ES(0.98)PQKEDGLSSQLK 121.5 5.595700000000001e-18 18306500.0 5956.7 6005.1 5878.6 6662.0 7787.9 5983.299999999999 6659.4 7341.0 6305.6 6716.6 6864.6 True False 6561.419798909226 6511.170851900285 6277.5571468935195 7073.4966095002355 7240.9047707964555 5934.573988556792 6912.827111163507 7194.577996096912 6040.597560314673 6292.512729737877 6020.297718284708 1.0898829436592536 1.081536355274376 1.042732011047804 1.1749413302296956 1.2027486196911072 0.9857608819797137 1.1482533646414246 1.1950535227262444 1.003371900025527 1.0452162042794668 1.0 12.555619118170725 -8.812889075180028 16.365399622296124 1.0015867417430457 1.113288356894459 0.31768545495098643 0.06354597899804276 2.6700432839116766 848.8003607727935 0.01062333633689578 0.011308913370026595 1.5385475564574525e-09 8.812889075180028 0.11170161515141319 ESGYYS(ph)SPER ddPTM_A549_MK2206_60min_R1 2 ESGYYSSPER 10 0 O60285 O60285 NUAK1 NUAK family SNF1-like kinase 1 1 ES(0.014)GYYS(0.945)S(0.041)PER;ES(0.003)GYYS(0.927)S(0.069)PER 57.175 0.013716999999999998 4398000.0 2160.3999999999996 2676.3 2123.9 2420.7 3174.0 2416.9 2009.87 2148.85 4424.9 3228.1000000000004 3961.4 True False 2525.0227032911394 2812.5122385984555 2425.1009568449504 3013.7716086693513 2707.108804572376 2672.654753791624 2375.037362821324 2453.4560680771265 3422.667215113309 2498.8699679871816 2977.6750509219487 0.847984639059034 0.9445329629664071 0.8144276710429131 1.0121223965443196 0.9091350662101965 0.8975642768555675 0.7976146900535586 0.8239502383973989 1.1494428225314852 0.8392017010766439 1.0 11.539970608091046 -8.757907492539305 24.999999837002868 1.0705702239002957 0.8839130909023735 0.10719606633515777 0.09668572580896688 49.53121975338055 350599.7351953554 0.013237600160213622 0.014719915479541178 1.7461940636459913e-09 8.757907492539305 -0.1866571329979222 ESGYYS(ph)SPER ddPTM_A549_PD325901_60min_R1 1 ESGYYSSPER 10 0 O60285 O60285 NUAK1 NUAK family SNF1-like kinase 1 1 ES(0.001)GYYS(0.775)S(0.223)PER 61.213 0.0076301 3132200.0 1142.2 1182.1 967.48 1178.6 1854.5 1782.6 1154.2 1330.6 1721.5 1177.5 1447.0 True False 1258.155303156802 1281.719715580311 1033.139010729858 1251.3994452051913 1724.2463176776846 1768.0830966191454 1198.1237126024746 1304.0601391644932 1649.151341677511 1103.152449046593 1269.0281732887534 0.991432128647094 1.0100009933259928 0.8141182618920302 0.9861084817070087 1.3587139781217066 1.3932575602613022 0.9441269609464019 1.027605349205883 1.2995387938501384 0.8692891712464628 1.0 10.309508383008 -6.54473927082761 24.764716108226352 1.153196733513415 0.938073439752098 0.19968574219515312 0.1673929113422071 212.8453084327703 241121.28212261977 0.023582538241160973 0.049094019056656814 2.8527303933599465e-07 6.54473927082761 -0.215123293761317 ESHPHGVKR ddPTM_A549_MK2206_60min_R1 2 ESHPHGVKR 9 1 O00193;E9PM92;E9PQA1;E9PRZ9 O00193 SMAP;C11orf58 Small acidic protein 0 ; 58.676 0.0034241999999999996 6620900.0 838.3 875.68 1194.24 1018.4 1517.85 1132.51 749.88 1032.3 1560.8100000000002 1871.52 1749.98 False True 979.784545532755 920.2483716683086 1363.6011896522966 1267.9080457177133 1294.5762756837364 1252.351456500704 886.1234893960586 1178.6316862861613 1207.2890271014055 1448.7423321729104 1315.4116690090345 0.7448501245780158 0.6995896367268641 1.0366345546254472 0.9638868770815238 0.984160553067775 0.9520604735429807 0.6736472773300086 0.8960173564326699 0.9178031908527289 1.1013604077758565 1.0 10.361298658242895 -2.000135583122511 0.0265382005538014 1.527078398520592 3.0944659325889186e-06 0.2419441732461951 0.11694403522810544 1893.338360387372 3.7549347956884973 71.92475940626379 160.88005967863282 0.009996878570499954 2.000135583122511 -1.5270753040546594 ESHPHGVKR ddPTM_A549_PD325901_60min_R1 2 ESHPHGVKR 9 1 O00193;E9PM92;E9PQA1;E9PRZ9 O00193 SMAP;C11orf58 Small acidic protein 0 ; 71.501 0.00096654 8545800.0 1813.27 2259.9 1905.3600000000001 2608.0 2112.35 2608.8999999999996 2146.1 2622.2 2051.6099999999997 2461.38 2715.3 False True 1997.3518355411784 2450.3497041197393 2034.669187460456 2769.090236802254 1963.9858232118922 2587.6539833780384 2227.7710098909815 2569.8981639238937 1965.3879663659575 2305.9680467382623 2381.3353137048744 0.838752872829868 1.0289813828475471 0.8544236402789172 1.162830879324639 0.8247414011411643 1.0866399068143722 0.935513363897091 1.0791836618446033 0.8253302065672611 0.9683508380643144 1.0 11.217555064177928 -8.766956169402334 24.999281473745828 0.9175170548633802 0.9775443943452897 0.027573389404795146 0.11145008526006903 316.8915694867573 1435988.7364765068 0.018751830268350395 0.020235195178187258 1.710187904839164e-09 8.766956169402334 0.060027339481909525 ESIESEIR ddPTM_A549_MK2206_60min_R1 2 ESIESEIR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 94.662 0.0070062 3052200.0 690.62 995.01 933.25 557.6899999999999 1010.71 819.6499999999999 1003.57 925.28 1116.38 998.52 866.75 False True 807.1797719621032 1045.651758968669 1065.598883175079 694.3240750356553 862.035897879441 906.3848189603635 1185.9056785795092 1056.4412735511573 863.5217124925309 772.9536384977418 651.5120539169479 1.2389329822975144 1.604961493317151 1.6355781551064243 1.0657117866988304 1.3231311572776054 1.391201917924769 1.820235974836904 1.6215222223437604 1.3254117207823894 1.1863995974451684 1.0 9.347648060763579 -9.84301825258726 0.9534643037302257 1.0449719139226945 1.457079224823656 0.2964526878005346 0.20775872405896278 0.3692702266968515 0.6897764223474644 0.07394070586964811 0.042405905808405454 1.435429103677261e-10 9.84301825258726 0.4121073109009614 ESIESEIR ddPTM_A549_PD325901_60min_R1 2 ESIESEIR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 100.45 0.0065718 4497300.0 1589.53 1643.52 1376.66 1007.4200000000001 1750.71 1211.2 1318.3600000000001 1593.19 1716.51 1811.15 1800.5900000000001 False True 1750.8979154498616 1782.0251983339424 1470.0884261290842 1069.6460453831783 1627.746169221623 1201.3363887720798 1368.5309112342727 1561.4125756166236 1644.3710540243176 1696.7936799072072 1579.12884488044 1.1087745760115137 1.1284862562743347 0.9309490045065881 0.6773646424425639 1.0307874335262768 0.7607589416575036 0.8666366368210364 0.9887809855913576 1.0413153172113814 1.0745124980828755 1.0 10.624913173584426 -8.479306927993514 7.334612440992886 1.0193237302000668 0.9246551709088436 0.1189439110513133 0.12864267050092681 0.4673409934108659 67.71429875585285 0.021577136371739202 0.02591909700970691 3.316599813705084e-09 8.479306927993514 -0.0946685592912232 ESIESEIRR ddPTM_A549_PD325901_60min_R1 2 ESIESEIRR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 153.05 1.7894000000000002e-05 15023400.0 2112.5 2283.9 2494.2 1663.28 2356.8 2848.5 2163.68 2392.3999999999996 2351.3 2716.3 2825.3 False True 2326.959444859694 2476.3722683477463 2663.471410843026 1766.0170280170448 2191.2664985186116 2825.3027604171652 2246.0200264111263 2344.681705198508 2252.4830378660054 2544.792354433341 2477.806011052326 0.9391209136147961 0.9994213660398819 1.07493137031815 0.712734176985476 0.8843575682456186 1.1402437268352807 0.9064551528217658 0.946273313867182 0.9090635133738231 1.027034539056819 1.0 11.274847527084917 ESKEEETS(ph)IDVAGKPNEVTK ddPTM_A549_MK2206_60min_R1 4 ESKEEETSIDVAGKPNEVTK 20 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 ESKEEET(0.117)S(0.883)IDVAGKPNEVTK;ESKEEET(0.205)S(0.795)IDVAGKPNEVTK;ESKEEET(0.131)S(0.869)IDVAGKPNEVTK;ESKEEET(0.158)S(0.842)IDVAGKPNEVTK 171.98 4.3131e-35 341070000.0 23125.2 21964.5 19546.100000000002 18774.2 26341.399999999998 21534.399999999998 22546.5 21469.9 30906.4 30005.6 31420.199999999997 True False 27028.168403142136 23082.399232035183 22318.03089250297 23373.879842805876 22466.614954241588 23813.15591462218 26642.907203376853 24513.324073811178 23906.149747379164 23227.31412020575 23617.697186595095 1.1444032070358983 0.9773348794198388 0.9449706597631463 0.9896764980149036 0.9512618769197009 1.0082759435216242 1.1280908122786333 1.0379218549607123 1.0122134075352525 0.9834707396193174 1.0 14.527580683004235 -5.2539040043171585 24.365700140809235 1.0061349459195918 1.1444033023930964 0.42545012969909746 0.04702893351814147 492.676284611578 1593016.713823592 0.006527910242378283 0.09361479577377552 5.5730892189517445e-06 5.2539040043171585 0.13826835647350455 ESKEEETS(ph)IDVAGKPNEVTK ddPTM_A549_PD325901_60min_R1 3 ESKEEETSIDVAGKPNEVTK 20 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 ESKEEET(0.251)S(0.749)IDVAGKPNEVTK;ESKEEET(0.024)S(0.976)IDVAGKPNEVTK;ESKEEET(0.021)S(0.979)IDVAGKPNEVTK 227.24 8.475299999999999e-76 536512000.0 72084.0 79430.0 83526.0 78451.2 93508.2 85232.4 80097.0 82999.8 94487.8 92362.9 91642.1 True False 79401.91461456403 86123.84485960918 89194.57664264072 83296.95244839771 86940.50661777744 84538.29559311208 83145.13516576009 81344.30387691643 90516.80635617556 86531.09073124893 80370.7026671357 0.9879460049443138 1.0715825792428462 1.1097896830894969 1.036409408953178 1.0817437664798244 1.0518546284612806 1.0345204459654287 1.012113882017593 1.126241321182186 1.0766496728245263 1.0 16.294382074738948 -11.205074789310551 1.651266228400137 1.0000296629156373 1.067724507743823 0.0 0.045334894024984015 0.432969810052089 2.1266293190372396 0.03126769776711557 0.006527507112482035 6.236274321332415e-12 11.205074789310551 0.06769484482818577 ESKGS(ph)PVFLPR ddPTM_A549_MK2206_60min_R1 3 ESKGSPVFLPR 11 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ES(0.029)KGS(0.971)PVFLPR;ES(0.009)KGS(0.991)PVFLPR;ES(0.026)KGS(0.974)PVFLPR 104.09 5.5811000000000005e-05 411324400.0 13569.1 13193.099999999999 12980.3 12057.5 17503.5 13142.8 12016.5 13349.4 19949.800000000003 19560.399999999998 19765.2 True False 15859.232347355972 13864.572437713747 14821.1017233083 15011.588041281751 14928.758336746247 14533.562372515438 14199.742505904595 15241.718330822896 15431.202153284265 15141.692054712195 14856.955348231057 1.0674618032855736 0.9332041533909928 0.9975867447883913 1.0104081010830464 1.0048329544534667 0.9782328903778981 0.955763961934185 1.0258978352948775 1.0386517150784587 1.0191652125087016 1.0 13.858850872676442 ESKGS(ph)PVFLPR ddPTM_A549_PD325901_60min_R1 5 ESKGSPVFLPR 11 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ES(0.155)KGS(0.845)PVFLPR;ES(0.262)KGS(0.738)PVFLPR;ES(0.246)KGS(0.754)PVFLPR;ES(0.05)KGS(0.95)PVFLPR;ES(0.039)KGS(0.961)PVFLPR 95.428 8.0938e-05 539845100.0 20231.5 19630.4 19896.300000000003 19974.1 23279.5 22058.8 21148.1 23477.9 22743.3 21576.4 24431.100000000002 True False 22285.386986356873 21284.72270089478 21246.582564171316 21207.854792527578 21644.428229915153 21879.160446371818 21952.90251818435 23009.61486644376 21787.47819295622 20214.062421748535 21426.22958150302 1.0400983944275268 0.9933956238044607 0.9916155562205499 0.9898080626764141 1.0101837165322125 1.0211390839039551 1.0245807567158713 1.0738993894804365 1.0168601111118991 0.9434260164559736 1.0 14.387090377830576 -6.992895822347821 23.583413265361337 1.0158428534699158 1.0018597386664176 0.015455822195777458 0.031268941443306775 210.9687453977758 700327.0837765087 0.0035363099146635446 0.006671600938285754 1.0164924977226252e-07 6.992895822347821 -0.01398311480349812 ESKLERT(ph)PQK ddPTM_A549_PD325901_60min_R1 2 ESKLERTPQK 10 2 P35251-2;P35251 P35251-2 RFC1 Replication factor C subunit 1 1 ESKLERT(1)PQK;ESKLERT(1)PQK 72.937 0.00065358 22315000.0 4790.8 4229.3 4940.9 5457.5 5022.3 7211.700000000001 5903.1 7215.700000000001 6629.1 5421.9 6354.6 True False 5277.158489199445 4585.717953729641 5276.219186045351 5794.597380118215 4669.550973994412 7152.970306231511 6127.745700800265 7071.777202892858 6350.501980316225 5079.5603086927595 5573.024485128344 0.9469110540033657 0.8228418816329736 0.9467425094084873 1.0397581054203404 0.8378845250824112 1.2834988120578448 1.0995368344697207 1.2689298641633366 1.1395072814165064 0.9114548701961749 1.0 12.44424477658441 -7.239830571591201 24.999240257846324 1.1007394739034964 0.9217642634430748 0.42795890097362366 0.1132859534131064 659.2694070968504 762709.5964965569 0.016042133303008983 0.027768706487816503 5.7566447367640735e-08 7.239830571591201 -0.17897521046042153 ESKS(ph)SPRPTAEK ddPTM_A549_MK2206_60min_R1 2 ESKSSPRPTAEK 12 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ES(0.311)KS(0.41)S(0.279)PRPTAEK;ES(0.251)KS(0.459)S(0.288)PRPT(0.002)AEK 45.438 0.016125999999999998 38377000.0 6979.1 7854.4 7668.2 6791.1 8481.2 6421.4 5684.200000000001 5209.9 8739.8 11376.599999999999 10779.4 True False 8157.00145738715 8254.155411145133 8755.666065859245 8454.919804864065 7233.626714977705 7100.908285819655 6716.945562523438 5948.419279649592 6760.249254592721 8806.618158608153 8102.577483694658 1.0067168717364336 1.0187073715438704 1.0806025716481995 1.0434852146589708 0.8927562531224663 0.8763764740428923 0.8289887478447917 0.7341391417261953 0.834333182027177 1.08689095245683 1.0 12.984165196540598 -6.762343066571335 24.77556967346356 0.8933515984558772 1.0391318802193856 0.38227161658341413 0.08806035821700753 17.662592264417075 484267.6635153345 0.012815834439270308 0.02525978305678094 1.7284504476919886e-07 6.762343066571335 0.14578028176350843 ESKS(ph)SPRPTAEK ddPTM_A549_PD325901_60min_R1 1 ESKSSPRPTAEK 12 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ES(0.206)KS(0.467)S(0.327)PRPTAEK 81.311 0.00015303 62451000.0 5734.0 5999.2 6445.1 5708.2 7624.0 6789.0 7208.8 7026.5 6601.0 6329.1 6672.7 True False 6316.111458852305 6504.773638194234 6882.503243534757 6060.782549737207 7088.516541372152 6733.7126348857755 7483.134828806717 6886.350945317385 6323.582925595847 5929.479545869038 5852.000201730382 1.0793081409984726 1.111547063219655 1.1760941569174355 1.0356770917309759 1.2112980685264063 1.1506685582298304 1.2787311296732395 1.176751658908206 1.0805848782653873 1.0132398054456229 1.0 12.514714103871128 -9.252256186335577 1.5151003389167161 1.023990660806988 1.1525979937512423 0.4282153735797979 0.0632752425924752 0.2423034774650927 1.1505515662443155 0.014405919128498904 0.012758368761357082 5.594275029854782e-10 9.252256186335577 0.1286073329442543 ESKSS(ph)PRPTAEK ddPTM_A549_PD325901_60min_R1 1 ESKSSPRPTAEK 12 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ES(0.309)KS(0.242)S(0.449)PRPTAEK 67.32600000000001 0.00099023 64052000.0 6293.6 6016.4 5624.6 6297.0 7038.9 7145.3 6016.1 7710.4 6609.1 6716.2 7690.0 True False 6932.521638896558 6523.423142557639 6006.319179467441 6685.951388475383 6544.511946886736 7087.111045816663 6245.045977636243 7556.610023308215 6331.342510764355 6292.1379858061355 6744.178750926405 1.0279267342883345 0.9672672364535946 0.8905931176041844 0.9913662782969649 0.9703942004781172 1.0508486366621217 0.9259905776931552 1.1204640775973222 0.9387862843781623 0.9329731933546134 1.0 12.719427059325463 ESKT(ph)PPPYSVYER ddPTM_A549_MK2206_60min_R1 1 ESKTPPPYSVYER 13 1 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;Q8N1I0-4 C9J637 DOCK4 Dedicator of cytokinesis protein 4 1 ES(0.089)KT(0.906)PPPYS(0.005)VYER 46.543 0.014436000000000001 11308000.0 3527.8 3557.4 3567.4 3330.3 4799.8 3848.1 3725.6 3737.0 5923.0 5097.3 5392.8 True False 4123.206393570861 3738.456465116073 4073.3109625917773 4146.223649502846 4093.755778256613 4255.303387837949 4402.49329505248 4266.731194082521 4581.449957087421 3945.8163897714035 4053.618926291683 1.0171667511289322 0.922251581387813 1.004857890358754 1.0228449503752142 1.0099014862261975 1.0497541740389422 1.0860649151053656 1.052573335497473 1.1302122968126673 0.9734058532682798 1.0 11.984994754574446 -6.737642319096931 1.0851814951180836 1.063697700811901 0.9732168879662062 0.23507452334056556 0.04621351111416796 0.4601424185433427 1.0435104992751056 0.008113009745369415 0.02588861435358157 1.8296064426796348e-07 6.737642319096931 -0.09048081284569487 ESLEQS(ph)IDQLR ddPTM_A549_PD325901_60min_R1 1 ESLEQSIDQLR 11 0 Q6ZU80;Q86TS1;Q6ZU80-3;Q6ZU80-1;G3V3F4 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 ES(0.009)LEQS(0.991)IDQLR 62.89 0.007022499999999999 935340.0 252.43 311.16 375.64 113.91 221.63 380.61 297.52 312.1 251.56 393.58 291.22 True False 278.0565077708558 337.38254521611503 401.13318930682146 120.94596199161997 206.06347338199245 377.5104383508431 308.84228640919093 305.8749206622864 240.98780802346465 368.72929163121705 255.40178619568132 1.0887022832245075 1.320987414542287 1.5705966480574456 0.47355174681102163 0.8068207996952406 1.478104143177784 1.2092409023818067 1.197622480321786 0.9435635185371292 1.443722446595215 1.0 7.996624804582943 -2.0000000008621313 0.16071588593756708 0.950048253447344 2.044629743080714 0.0 0.3238218767573369 135.40561130310078 1.3267242929709087 0.43653669060169803 35.46273273729528 0.009999999980148694 2.0000000008621313 1.0945814896333699 ESLGS(ph)EEESGKDWDELEEEAR ddPTM_A549_MK2206_60min_R1 1 ESLGSEEESGKDWDELEEEAR 21 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 ES(0.012)LGS(0.494)EEES(0.494)GKDWDELEEEAR 40.669000000000004 0.024935 533760.0 152.91 232.34 127.83 312.35 350.71 414.43 245.4 190.63 496.04 289.32 333.98 True False 178.71746970942812 244.16511359562276 145.95821616530435 388.87576402192417 299.12102358272784 458.2847075236304 289.98600349094863 217.65238627989052 383.6877320131092 223.96241105853332 251.0435486209199 0.711898276977014 0.972600630197099 0.5814059630972783 1.5490370740780648 1.1915104977838158 1.8255187597576874 1.1551223087944495 0.8669905579153098 1.5283712093812232 0.8921257379002415 1.0 7.9717938405235955 -6.255793191300484 24.989468698110308 1.2734707414921307 0.7770315190239506 0.36274905892322107 0.29117120999572826 385.0562825824677 1704214.6622050065 0.040406488330759605 0.10377562437783722 5.548898856371225e-07 6.255793191300484 -0.49643922246818006 ESLIDGIKR ddPTM_A549_MK2206_60min_R1 2 ESLIDGIKR 9 1 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ; 82.287 0.0015408 2679500.0 2586.2 2992.4 2587.2 2348.1000000000004 3985.4 2642.2 2845.2 2539.0 4458.2 3887.1000000000004 3747.3 False True 3022.687333480627 3144.700378426191 2954.1038634348397 2923.3846054102146 3399.152939427456 2921.795850249588 3362.1360111346667 2898.9110253613917 3448.4248182824836 3009.001410291804 2816.7419897813434 1.073114734841323 1.116431817267831 1.0487662250045697 1.0378602711983391 1.2067675888522982 1.037296231195247 1.1936258355688663 1.029171658560899 1.2242600958102579 1.0682559571334347 1.0 11.459811705275765 ESLIDGIKR ddPTM_A549_PD325901_60min_R1 4 ESLIDGIKR 9 1 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ;;; 76.827 0.0019817 10175500.0 5034.0 5162.389999999999 5627.31 5725.62 6012.08 6312.32 6089.469999999999 6489.799999999999 6349.9 5797.47 6425.03 False True 5545.047974165069 5597.442722709278 6009.213096363989 6079.278543573519 5589.812241350039 6260.914558763026 6321.208113135846 6360.355847850386 6083.035785372073 5431.416754797583 5634.792041620897 0.9840732245674833 0.9933716597461377 1.066448069773909 1.0788825033238958 0.9920174870805135 1.1111172360075279 1.1218174630837832 1.128764966101708 1.0795492966626388 0.9639072240251103 1.0 12.460146651748408 -5.737330681041309 8.84641497031413 1.0560288355975551 0.9883831905478212 0.21726124706736882 0.05187664535807562 0.2995003091553307 95.25576931335783 0.007224460965873302 0.02723855038608088 1.8309197902771512e-06 5.737330681041309 -0.06764564504973392 ESLKEEDES(ph)DDDNM ddPTM_A549_MK2206_60min_R1 17 ESLKEEDESDDDNM 14 1 G3V4X5;P25788-2;P25788;H0YJ03 G3V4X5 PSMA3 Proteasome subunit alpha type-3 1 ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ES(0.001)LKEEDES(0.999)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ES(0.001)LKEEDES(0.999)DDDNM;ES(0.002)LKEEDES(0.998)DDDNM;ESLKEEDES(1)DDDNM;ES(0.001)LKEEDES(0.999)DDDNM;ESLKEEDES(1)DDDNM 153.94 2.5507e-15 6245055200.0 126066.59 138161.90000000002 124232.86 114483.96 171997.15000000002 130332.85 129337.06 124727.16 191418.91999999998 185156.13 191274.75999999998 True False 147343.54835979248 145193.75057281193 141850.94762351539 142532.53533938038 146696.59707824705 144124.58567905606 152835.9296359783 142407.61689090752 148062.8402532029 143329.23163648267 143775.95817718064 1.0248135378671264 1.0098611229137773 0.9866110399953447 0.9913516637025785 1.0203138197657997 1.0024247969291624 1.0630145093356478 0.9904828226942722 1.0298164041497075 0.9968928981843581 1.0 17.133462926859636 ESLKEEDES(ph)DDDNM ddPTM_A549_PD325901_60min_R1 13 ESLKEEDESDDDNM 14 1 G3V4X5;P25788-2;P25788;H0YJ03 G3V4X5 PSMA3 Proteasome subunit alpha type-3 1 ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM 163.4 1.3419e-19 9725227000.0 162578.6 167242.0 163056.5 177865.80000000002 199597.69999999998 189385.2 176279.09999999998 187987.9 203412.50000000003 193234.29999999996 209384.6 True False 179083.45978796054 181336.0702758502 174122.4946283886 188852.16650345965 185578.64612668357 187842.9097216631 182987.49761412456 184238.33386084507 194863.78001102342 181033.45332042823 183631.6215983388 0.9752321426408436 0.9874991501871627 0.9482162882014422 1.0284294440123165 1.0106028826157378 1.022933349314617 0.9964923035661954 1.0033039639754058 1.061166798587952 0.9858511935183277 1.0 17.486454988498686 -6.275055063371768 24.616189027879898 1.0235646566035412 0.9720341893864781 0.37198197332127303 0.02244930617267677 425.0898132738466 768532.2136759153 0.0035981511970070205 0.008409642297765365 5.30817138668376e-07 6.275055063371768 -0.051530467217063114 ESLNVDVVKYES(ph)GPDGGEEDGTGSLKR ddPTM_A549_PD325901_60min_R1 1 ESLNVDVVKYESGPDGGEEDGTGSLKR 27 2 Q07866-6;G3V5R9;G3V3H3 Q07866-6 KLC1 Kinesin light chain 1 1 ES(0.009)LNVDVVKY(0.001)ES(0.987)GPDGGEEDGT(0.001)GS(0.002)LKR 45.751000000000005 0.004505100000000001 5405400.0 2644.8 3328.0 2545.0 3076.5 2982.2 3366.1 2544.9 2956.7 3735.9 2799.8 3811.8 True False 2913.2981490011475 3608.462239617017 2717.719004328241 3266.528417761556 2772.7405600314855 3338.6875976268966 2641.7475621227145 2897.7262990137224 3578.8931149422074 2623.0201501831434 3342.972764991062 0.8714693040608534 1.0794171814399047 0.8129647458660967 0.977132823805787 0.82942361632997 0.9987181566631229 0.7902390320938728 0.8668112194511013 1.0705720227283324 0.7846370086087604 1.0 11.706915886110856 -8.761844502403724 24.99981211910818 1.0333256805550797 0.9055474564422367 0.0 0.11229188414429937 8.775475606760052 541519.6998564712 0.01355673220315278 0.014869703511448751 1.730435824708887e-09 8.761844502403724 -0.127778224112843 ESLPPAAEPS(ph)PVSK ddPTM_A549_MK2206_60min_R1 4 ESLPPAAEPSPVSK 14 0 Q9NWT1 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 1 ESLPPAAEPS(0.999)PVS(0.001)K;ESLPPAAEPS(1)PVSK;ESLPPAAEPS(0.998)PVS(0.002)K;ESLPPAAEPS(0.998)PVS(0.002)K 175.15 8.370700000000001e-23 38486900.0 20314.7 26532.0 19582.7 23233.2 28459.1 21224.7 19349.2 20634.2 34043.5 28332.699999999997 35990.0 True False 23743.324713270005 27882.36547266534 22359.821322853062 28925.33504297799 24272.80408954179 23470.6836661844 22864.699179898398 23559.161039587245 26332.701606298444 21932.323392085254 27052.689726531233 0.8776696496091606 1.0306688818938556 0.8265285836226569 1.0692221489018967 0.8972418023830311 0.8675915002701609 0.8451913436716213 0.8708620576268319 0.973385710348547 0.8107261648950082 1.0 14.723484421372834 -8.912560787143974 6.272523078896341 0.9884306421243293 0.913126801913091 0.0 0.08913918815867455 0.2541314126602315 14.690160318708859 0.012009072811169814 0.012702835863085604 1.223035921701281e-09 8.912560787143974 -0.07530384021123826 ESLPPAAEPS(ph)PVSK ddPTM_A549_PD325901_60min_R1 2 ESLPPAAEPSPVSK 14 0 Q9NWT1 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 1 ESLPPAAEPS(0.974)PVS(0.026)K;ESLPPAAEPS(0.956)PVS(0.044)K 174.59 9.186e-23 52674000.0 31550.0 47321.0 31975.0 41255.0 40304.0 33412.0 33337.0 32583.0 45943.0 33358.0 56762.0 True False 34752.93277411755 51308.90674306392 34145.01578129493 43803.227653097034 37473.18608125176 33139.90374971328 34605.65777770638 31933.106504131 44012.17548108618 31251.770187088096 49780.633843964184 0.6981215402569906 1.0307001494575192 0.6859096227726107 0.8799250686601714 0.7527663508405753 0.6657187984706916 0.6951630605222247 0.6414764947393862 0.8841224404462376 0.6277897200956858 1.0 15.603296979448995 -9.125460665694757 2.3571256458212404 0.9583749779019864 0.7626216657501415 0.0 0.14782088770471416 0.20403987295007722 2.3455887585972888 0.021587700155420723 0.020726996494262 7.4909920179126e-10 9.125460665694757 -0.195753312151845 ESLPPAAEPS(ph)PVSKEQSK ddPTM_A549_MK2206_60min_R1 2 ESLPPAAEPSPVSKEQSK 18 1 Q9NWT1 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 1 ESLPPAAEPS(0.946)PVS(0.053)KEQS(0.001)K;ESLPPAAEPS(0.973)PVS(0.027)KEQSK 136.92 1.6439000000000002e-13 36514000.0 13735.599999999999 13361.5 13913.6 12736.7 17727.1 13754.8 12240.0 11041.2 20326.2 22649.0 21287.2 True False 16053.83347682179 14041.543278419194 15886.757697235222 15857.192071772193 15119.467072947366 15210.323806302704 14463.849562873736 12606.323912256874 15722.348154271545 17532.575169586355 16001.000743167982 1.0033018393350408 0.8775415677931628 0.9928602561948171 0.9910125201727028 0.9449075914456783 0.9505857821297286 0.9039340598149419 0.7878459675492142 0.9825853024214491 1.0957174148668367 1.0 13.965874517290604 -8.970981063043151 24.99955986867982 0.9923171568588993 0.9308513208949176 0.2519950577487007 0.06610475331913805 227.72357835507944 196183.5436451179 0.010224392491324924 0.010738162986846343 1.0691014952593338e-09 8.970981063043151 -0.061465835963981696 ESLPPAAEPS(ph)PVSKEQSK ddPTM_A549_PD325901_60min_R1 3 ESLPPAAEPSPVSKEQSK 18 1 Q9NWT1 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 1 ES(0.001)LPPAAEPS(0.96)PVS(0.012)KEQS(0.028)K;ESLPPAAEPS(0.763)PVS(0.235)KEQS(0.002)K;ESLPPAAEPS(0.967)PVS(0.033)KEQSK 151.3 7.5987e-18 48175400.0 24205.8 25410.9 25660.8 26825.0 28382.7 28934.6 29124.8 30332.8 28594.9 29524.2 32575.6 True False 26663.15499663186 27552.36572256129 27402.296198925782 28481.9193260048 26389.19706699941 28698.966210836046 30233.160201702103 29727.788508378744 27393.155794443363 27660.036973368515 28569.007713742285 0.9332895025194148 0.964414515149857 0.9591616367461272 0.9969516481422772 0.9237001624773149 1.0045489328294468 1.0582502726253011 1.040560764526626 0.9588416954806129 0.9681833282597163 1.0 14.80216330762198 -5.789270106118304 0.7653824883271108 0.9902786544889619 0.9295892449279193 0.23630612515009364 0.034981580104779995 2.1399232787410423 1.360465681456017 0.00623569020715704 0.09449181647594496 1.6245380725094877e-06 5.789270106118304 -0.06068940956104263 ESLPVSGEESQLT(ph)PEKSPK ddPTM_A549_MK2206_60min_R1 2 ESLPVSGEESQLTPEKSPK 19 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 ESLPVSGEES(0.004)QLT(0.983)PEKS(0.013)PK;ESLPVSGEES(0.002)QLT(0.964)PEKS(0.034)PK 112.45 9.329000000000001e-11 14754100.0 5339.799999999999 5666.3 5422.6 4063.7 6632.6 5368.1 6159.700000000001 5913.8 9265.3 7584.0 8906.1 True False 6241.027694424193 5954.690467275877 6191.606219025105 5059.306682426423 5656.953326152091 5936.14877894361 7278.837757551742 6752.099260252934 7166.7243436437775 5870.769132683243 6694.469574144484 0.9322661975384005 0.8894939922162323 0.9248837641952176 0.7557442193727462 0.8450189015722008 0.8867242898332564 1.0872911851992302 1.0086085515021277 1.070544016111933 0.8769580722806548 1.0 12.708754035048578 -7.6934862072428745 6.688856740361898 1.035498156475531 0.8678122727666131 0.4743558331737059 0.06888915451976746 0.08937690732548051 7.015371354984716 0.00807094198419439 0.011968154702955463 2.0254139309183836e-08 7.6934862072428745 -0.1676858837089179 ESLPVSGEESQLT(ph)PEKSPK ddPTM_A549_PD325901_60min_R1 1 ESLPVSGEESQLTPEKSPK 19 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 ESLPVSGEES(0.015)QLT(0.978)PEKS(0.007)PK 102.21 8.753099999999999e-10 12267000.0 5201.8 5763.5 6010.6 5301.7 6700.5 6589.4 5402.1 6083.9 5698.2 5976.6 6623.8 True False 5729.882906637232 6249.210372005012 6418.515460674001 5629.17396796569 6229.879995470112 6535.738111108604 5607.679871642549 5962.551841772782 5458.7244700242745 5599.2364560270635 5809.114591727741 0.9863607983902855 1.0757595281222327 1.104904260248895 0.9690244320505764 1.0724319338340385 1.1250833509835707 0.9653243679558263 1.0264131904479106 0.9396826975659205 0.9638708907550995 1.0 12.504102573685106 -7.794576266794105 24.985796217341072 0.9753616717813886 1.0555824499418114 0.3892707118178531 0.04763216683025727 143.898586158739 108501.55212108423 0.007515241634688865 0.01038416936554175 1.6048104113367322e-08 7.794576266794105 0.08022077816042283 ESLS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 ESLSPGK 7 0 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;H7BXY5 E7ETM8 NEXN Nexilin 1 ES(0.014)LS(0.986)PGK 47.603 0.059078 1470700.0 1596.3 1712.2 1452.0 1770.9 1954.5 1621.4 1742.1 1886.6 2118.8 2060.6 2202.3 True False 1865.71641421202 1799.343666602503 1657.9154335603685 2204.770579498721 1666.9956391104938 1792.975471801787 2058.617019892347 2154.031327470185 1638.895183028337 1595.1090288511475 1655.4081296121074 1.1270431628538589 1.086948671095461 1.0015146137701092 1.3318592195239125 1.006999790137011 1.0831017679138222 1.2435706839102685 1.3012086197588713 0.9900248486833034 0.9635744807082173 1.0 10.692971232195084 -8.873276646281008 21.618711552698425 0.9952756544843739 1.1435330104431187 0.3294726077329402 0.10327801716685546 2.952870066967406 556.0516681801183 0.017465055961820544 0.018592817481713902 1.3388235829722692e-09 8.873276646281008 0.14825735595874479 ESLS(ph)PGKLK ddPTM_A549_MK2206_60min_R1 1 ESLSPGKLK 9 1 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;H7BXY5 E7ETM8 NEXN Nexilin 1 ES(0.004)LS(0.996)PGKLK 57.836000000000006 0.0035275999999999997 11599000.0 1844.9 2128.5 1802.7 1702.7 2630.5 1931.6 1902.7 1713.7 2864.3 2671.3 2817.9 True False 2156.2740165255623 2236.8315584414363 2058.349966996747 2119.861576437108 2243.55693460228 2136.0006299076913 2248.395961052275 1956.6222229861437 2215.5406233472077 2067.8514747015774 2118.1376599164337 1.0180046638756393 1.056036914300313 0.9717734621072525 1.0008138831357836 1.0592120507837033 1.0084333376103432 1.0614966173355231 0.9237464873096765 1.0459851903273447 0.9762592459562613 1.0 11.048580639254366 ESLS(ph)PGKLK ddPTM_A549_PD325901_60min_R1 2 ESLSPGKLK 9 1 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;H7BXY5 E7ETM8 NEXN Nexilin 1 ES(0.05)LS(0.95)PGKLK;ESLS(1)PGKLK 73.781 0.00061486 30146000.0 6432.700000000001 6357.9 6932.2 6322.3 7079.0 6814.9 6423.5 7025.700000000001 6571.5 5768.7 6626.9 True False 7085.742968496551 6893.70254605199 7402.660778705004 6712.814112014918 6581.79546122422 6759.401713872891 6667.949807574074 6885.566901944975 6295.322708006833 5404.463297507498 5811.833311380263 1.2191923940113392 1.1861493915445405 1.273722142754802 1.1550252308287003 1.132481801970521 1.1630412215431534 1.147305755400354 1.1847495502773995 1.0831905133410897 0.9299067966944121 1.0 12.504777610431596 -9.06655239638176 0.27009705478769086 0.961922026823629 1.2369687384708195 0.8096259827970835 0.04070379385463698 0.514987415534111 0.11945238775128453 0.05228474124361356 0.03649856846968608 8.579216027014724e-10 9.06655239638176 0.2750467116471904 ESLT(ph)PGREENPSSVLAQER ddPTM_A549_MK2206_60min_R1 2 ESLTPGREENPSSVLAQER 19 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 ES(0.001)LT(0.999)PGREENPSSVLAQER;ES(0.002)LT(0.998)PGREENPSSVLAQER 173.89 1.2037e-34 63865000.0 2385.17 2852.9 1919.82 1874.83 2882.3999999999996 2555.2 2024.42 2644.1 3957.8 3321.8 3292.3 True False 2787.7283841922463 2998.1004242788686 2192.079344116987 2334.163434164316 2458.4027782921903 2825.5895679955147 2392.230909483076 3018.9092722166433 3061.3646193078857 2571.403072909705 2474.731047142507 1.1264773145393505 1.2114853562534318 0.8857848801986427 0.9431988323981711 0.9934020026664431 1.141776425061678 0.9666629883862768 1.2198938853183587 1.2370494251659168 1.0390636493120422 1.0 11.273056026808781 -8.250577528615327 24.751864644915756 1.1231642843069196 1.0377696553036133 0.12337221347253524 0.10975181514063019 1253.792229592745 2857130.688266094 0.02053588470581706 0.026376460689246616 5.615940157579626e-09 8.250577528615327 -0.0853946290033063 ESLT(ph)PGREENPSSVLAQER ddPTM_A549_PD325901_60min_R1 2 ESLTPGREENPSSVLAQER 19 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 ES(0.001)LT(0.999)PGREENPSSVLAQER;ESLT(1)PGREENPSSVLAQER 213.2 1.1961999999999998e-66 93951000.0 6341.6 6034.2 6967.3 7192.3 7666.0 7558.9 6203.299999999999 7197.8 7988.6 7055.4 7638.299999999999 True False 6985.394563560823 6542.7232110267405 7440.14287577845 7636.55203610156 7127.566606264288 7497.342824545309 6439.369976076006 7054.234232435132 7652.866923104824 6609.920839917906 6698.837523173102 1.042777129523808 0.976695312939548 1.1106617902047886 1.1399816773708344 1.0640005197331768 1.119200577504673 0.961266780064522 1.0530534899574167 1.1424171576981041 0.9867265502488142 1.0 12.709695045148633 -11.18871168483035 1.6198757867337916 1.0000955845887693 1.0779163034971857 0.1763932116888841 0.057991122315467804 0.5520225444824876 2.609371632853348 0.045039098014599654 0.00950256789511499 6.475723770910057e-12 11.18871168483035 0.07782071890841635 ESMEAS(ph)PEAMVK ddPTM_A549_MK2206_60min_R1 2 ESMEASPEAMVK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.002)MEAS(0.998)PEAMVK;ES(0.002)MEAS(0.998)PEAMVK 65.179 0.0008898999999999999 4216100.0 2470.2 3349.3 2707.1 2506.0 4238.1 3238.1 2906.4 2886.9 4222.5 4254.1 4763.1 True False 2887.109369408339 3519.7650639830376 3091.0074863576274 3119.970112498614 3614.6811041771234 3580.7535927231816 3434.455258949035 3296.126915760455 3266.110491946925 3293.0958553992373 3580.290815127562 0.8063896254487568 0.9830947388718289 0.8633397804718548 0.8714292423721599 1.0096054457096766 1.0001292569848417 0.9592671199885948 0.9206310565146139 0.9122472616321691 0.9197844603810229 1.0 11.805861062236048 -3.1821259791182066 0.48357066781484387 0.9593371478439272 2.302275487560166e-15 0.3062177514985728 0.05236044926618352 26.598254543128924 0.8278480072339163 0.010541349737174502 22.49447753573272 0.000657467093188935 3.1821259791182066 -0.9593371478439249 ESMEAS(ph)PEAMVK ddPTM_A549_PD325901_60min_R1 2 ESMEASPEAMVK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.001)MEAS(0.999)PEAMVK;ESMEAS(1)PEAMVK 60.50899999999999 0.0024536 12047000.0 8812.3 9116.0 10537.1 9011.400000000001 11678.7 10458.4 9419.9 10205.599999999999 10820.2 11061.8 12304.9 True False 9706.91820872762 9884.237312604779 11252.210970729708 9568.013711625708 10858.428401327783 10373.230257871473 9778.379449267064 10002.04130186168 10365.464622259069 10363.356060181399 10791.47530718782 0.8994987184247353 0.9159301236617052 1.042694409283873 0.8866270309911002 1.0062042577343773 0.9612430147490799 0.9061207268624366 0.9268465170095579 0.9605234064108917 0.9603280149544273 1.0 13.397604489312222 -9.91632506282058 0.8760725326431802 0.9957202794468646 0.9458953214284629 0.06254947692928059 0.045936379182229564 0.676878480167335 1.0634664910372436 0.016590661578354895 0.00859189715722212 1.212480987151237e-10 9.91632506282058 -0.0498249580184017 ESMS(ph)EADR ddPTM_A549_MK2206_60min_R1 1 ESMSEADR 8 0 A0A0D9SER9;A0A1W2PPZ7;A0A0D9SEQ1;A0A1B0GVZ8;A0A1B0GUD1;A0A1B0GU48;A0A1B0GV09;Q9H9B1-4;Q9H9B1-3;Q9H9B1;A0A1B0GW12 A0A0D9SER9 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 ES(0.01)MS(0.99)EADR 64.04 0.0034099000000000004 4639700.0 308.91 317.97 431.17 211.66 486.15 451.44 249.95 272.51 524.86 472.82 519.6 True False 361.04645587560924 334.1533148403212 492.3163894546995 263.5167095017786 414.63797899901067 499.2110811583807 295.3626795947949 311.1391270268739 405.98004802919206 366.00963361224825 390.568979769537 0.9244114985492495 0.8555551826914032 1.2605107291039872 0.6746995361927409 1.0616254758472525 1.2781636715054794 0.7562369130520287 0.7966304113820502 1.039457993486192 0.9371190559686012 1.0 8.609433560121264 -2.000657068751763 0.06586375490436873 1.068491167435337 0.7679840674104034 0.0 0.1858437906550169 1253.9105993725009 5.959204055882635 4.97385409254072 35.27042075346531 0.009984881872291419 2.000657068751763 -0.30050710002493364 ESMS(ph)EADR ddPTM_A549_PD325901_60min_R1 2 ESMSEADR 8 0 A0A0D9SER9;A0A1W2PPZ7;A0A0D9SEQ1;A0A1B0GVZ8;A0A1B0GUD1;A0A1B0GU48;A0A1B0GV09;Q9H9B1-4;Q9H9B1-3;Q9H9B1;A0A1B0GW12 A0A0D9SER9 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 ES(0.04)MS(0.96)EADR;ES(0.034)MS(0.966)EADR 52.549 0.0095443 13940000.0 1655.51 1347.44 1212.42 1082.5 1478.93 1345.75 1388.56 1324.45 1558.3400000000001 1336.65 1686.8400000000001 True False 1823.5761564779525 1460.993497641091 1294.7021120737327 1149.3635664641267 1375.0550588315218 1334.7906581819905 1441.4024106491865 1298.0328057390743 1492.8483890733266 1252.2536908858835 1479.3693737597782 1.2326712914458826 0.9875785747328367 0.8751716339667635 0.7769280524870199 0.9294873094045848 0.9022700360422192 0.9743357110238806 0.8774230619903657 1.0091113251042179 0.846478041993876 1.0 10.530766598869597 -8.801641088772367 24.778809174570597 1.0043026068976 0.9371122384859869 0.0 0.1169958656848037 284.86102520957843 175576.29136820705 0.018560379862814086 0.019759162486482643 1.5789155838350169e-09 8.801641088772367 -0.06719036841161308 ESNRLS(ph)APSYLAR ddPTM_A549_MK2206_60min_R1 4 ESNRLSAPSYLAR 13 1 Q9H4B6;H0YJH0 Q9H4B6 SAV1 Protein salvador homolog 1 1 ES(0.002)NRLS(0.998)APSYLAR;ES(0.009)NRLS(0.991)APSYLAR;ESNRLS(0.999)APSYLAR;ESNRLS(1)APSYLAR 136.34 4.9775e-09 45964500.0 4151.799999999999 4371.370000000001 4162.84 8305.93 5965.98 4557.0 4592.610000000001 4931.25 6553.7699999999995 6600.450000000001 7019.900000000001 True False 4852.522338235585 4593.854061369107 4753.1933081559555 10340.883222867371 5088.392245085916 5039.218715308219 5427.027789293263 5630.269788819757 5069.351559220133 5109.4037607883865 5276.665090616192 0.9196191637906137 0.8705979975000936 0.9007949579003682 1.9597384039508552 0.964319728029529 0.9550006734878363 1.0284957821076175 1.0670129129158492 0.9607112583732598 0.968301696818838 1.0 12.365410703394883 ESNRLS(ph)APSYLAR ddPTM_A549_PD325901_60min_R1 2 ESNRLSAPSYLAR 13 1 Q9H4B6;H0YJH0 Q9H4B6 SAV1 Protein salvador homolog 1 1 ESNRLS(1)APSYLAR;ES(0.001)NRLS(0.999)APSYLAR 128.45 1.4291e-08 61551000.0 2908.0 2989.4 2417.7 2553.5 2853.8999999999996 2735.4 2849.8999999999996 3226.3999999999996 3167.7 3384.0 3633.3 True False 3203.218019243546 3241.3272293002105 2581.7796608111557 2711.2238955807343 2653.4519094205125 2713.1238093189795 2958.3545040251192 3162.0469209381654 3034.57258497348 3170.333662482947 3186.427133386335 1.005269502535075 1.0172293586564873 0.810242805730631 0.8508664350656014 0.8327357878730434 0.8514626871243222 0.9284237110048601 0.9923487305914761 0.9523433168071622 0.9949493679818485 1.0 11.637723954511735 -8.049024931578087 4.5165843584967105 0.9776817010186035 0.8912755147717857 0.3049893625303117 0.06309691474451738 0.22487316726114684 9.915093710629115 0.01086391356666701 0.01438213340500673 8.932542031458321e-09 8.049024931578087 -0.08640618624681784 ESNYFGLS(ph)PEER ddPTM_A549_MK2206_60min_R1 2 ESNYFGLSPEER 12 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 ESNYFGLS(1)PEER;ESNYFGLS(1)PEER 244.15 6.601300000000001e-51 57805000.0 17180.9 20007.2 17631.300000000003 17304.5 25209.0 20117.0 17898.199999999997 19459.800000000003 29773.0 28834.0 28192.0 True False 20080.615887324 21025.481022339434 20131.683459871172 21544.10327682853 21500.78949416038 22245.767587416158 21150.07126194662 22218.286243138085 23029.463037711266 22320.379373917287 21191.148340382588 0.9475945128022005 0.9921822397077249 0.9500043667528644 1.0166557720599472 1.0146118156885218 1.049766970156301 0.9980615926151728 1.0484701388644497 1.0867491779020546 1.0532878641306473 1.0 14.37117414848116 -6.534710646983188 1.2211199673883304 1.0399101381888496 0.9619112719991978 0.5814652586006807 0.026703359310052237 0.3479114856589297 0.9853959579153627 0.005380340346342297 0.01890234445813833 2.9193714264277107e-07 6.534710646983188 -0.0779988661896518 ESNYFGLS(ph)PEER ddPTM_A549_PD325901_60min_R1 2 ESNYFGLSPEER 12 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 ESNYFGLS(1)PEER;ESNYFGLS(1)PEER 211.39 1.6945e-31 83218000.0 19755.7 19027.5 19648.8 19026.3 20203.8 18903.1 18545.0 18572.0 20460.6 22822.9 24283.0 True False 21761.284120622342 20631.014202017064 20982.285725832902 20201.511339137556 18784.754787326176 18749.15942090283 19250.740123213385 18201.566890547845 19600.71213565312 21381.85819901951 21296.344942619773 1.0218318767495214 0.9687584539790581 0.9852529052458033 0.9485905395300412 0.8820647316682393 0.8803933008889552 0.9039457322410017 0.854680319068347 0.9203791631129513 1.004015395910901 1.0 14.378318223820262 -6.280866610144069 3.7890722217707484 0.937202149944558 0.9907666580897655 0.2647065625183386 0.04706315865948589 0.3440060810930962 10.998304149095079 0.00794184479822078 0.020718083683822858 5.237612807056968e-07 6.280866610144069 0.05356450814520752 ESNYFGLS(ph)PEERR ddPTM_A549_PD325901_60min_R1 1 ESNYFGLSPEERR 13 1 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 ESNYFGLS(1)PEERR 72.433 0.00071794 3702100.0 892.23 994.78 881.32 850.86 935.12 1055.7 1010.3 1507.1 1008.0 1026.6 1269.1 True False 982.808532774989 1078.613601780714 941.1316750076883 903.4156897567353 869.4403971888677 1047.102729216219 1048.7475193573723 1477.039708202922 965.6372654144232 961.7803007993483 1113.0087454877382 0.883019595990961 0.9690971487452672 0.8455743756040922 0.8116878626688995 0.7811622331932936 0.9407857157109415 0.9422635029680692 1.3270692743350003 0.8675918040439704 0.8641264542605914 1.0 10.120249213390675 -7.4660532310069065 6.823262843127087 0.9704402062351436 0.8606236310719885 0.21151682612959533 0.12502763036274472 0.38940831636679624 38.90794375874588 0.019352236696675018 0.030858715238345664 3.419375290304536e-08 7.4660532310069065 -0.10981657516315513 ESPGDLTRS(ph)PEMDKLK ddPTM_A549_MK2206_60min_R1 1 ESPGDLTRSPEMDKLK 16 2 O43149;O43149-3 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 ES(0.035)PGDLT(0.267)RS(0.698)PEMDKLK 51.566 0.0039088000000000005 5088400.0 1051.5 1298.4 1191.1 1059.2 1425.9 1261.6 1068.5 908.38 1371.9 1637.6 1730.7 True False 1228.9674932932026 1364.4830140852048 1360.0158904364696 1318.7040475492952 1216.1519988783089 1395.1016746176963 1262.6326191119756 1037.145646797078 1061.1668404741235 1267.6650226374063 1300.9194251099655 0.9446914770984522 1.048860511841359 1.0454266914505552 1.0136708101178722 0.9348403716667608 1.0723966816774757 0.9705694255470484 0.7972404952823339 0.8157052773536871 0.9744377692955517 1.0 10.345315893455593 -8.009600323184758 24.477334764407903 0.9010053884250193 1.0110593448257417 0.3810295344418091 0.06730437430580004 351.3778426742725 895887.8325788772 0.013035794077737637 0.017470993389809304 9.781369764319058e-09 8.009600323184758 0.11005395640072235 ESPGDLTRS(ph)PEMDKLK ddPTM_A549_PD325901_60min_R1 2 ESPGDLTRSPEMDKLK 16 2 O43149;O43149-3 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 ESPGDLT(0.003)RS(0.997)PEMDKLK;ES(0.004)PGDLT(0.172)RS(0.824)PEMDKLK 112.74 5.7364e-08 21473000.0 3206.1 3783.0 3644.0 3287.2 5020.9 4246.8 4525.7 4224.8 4509.9 4348.9 4237.3 True False 3531.5809117939243 4101.806686439653 3891.3037531521095 3490.2428782271368 4668.249305164673 4212.215468822051 4697.927990058063 4140.533049708516 4320.36458659971 4074.3097118120836 3716.1389624577973 0.9503360739390087 1.1037818358995868 1.0471362326500462 0.9392121536592765 1.2562095638310482 1.1334924531552384 1.2641959941538154 1.1142029648347787 1.1625950025674732 1.0963824961802284 1.0 11.859588735979067 -5.259887953172054 22.89161158913501 1.0977477054482903 0.9503359403431444 0.18476384058432027 0.09335015234619952 62.84988272444137 927034.9934389605 0.013892141388535464 0.12063538908367484 5.496826722409713e-06 5.259887953172054 -0.14741176510514586 ESPLLFK ddPTM_A549_PD325901_60min_R1 2 ESPLLFK 7 0 P26038;V9GZ54 P26038 MSN Moesin 0 ; 110.35 0.023322 5198900.0 3480.8 3865.5 4037.8 3547.7999999999997 4615.7 4255.6 3729.3 4738.0 4323.8 4296.0 4957.9 False True 3834.1682535704736 4191.259250973432 4311.829389263879 3766.9395483615963 4291.509155300559 4220.943804539685 3871.2205522512622 4643.496873110903 4142.0857224195315 4024.749826840053 4348.10973071756 0.8818011713190432 0.9639267430083365 0.9916560658077751 0.8663395778054447 0.9869827168764528 0.970753744948178 0.8903226440912296 1.0679346108279093 0.9526175692295539 0.9256320737277844 1.0 12.086172633942782 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_MK2206_60min_R1 11 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 40 1 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ES(0.101)PRPLQLPGAEGPAIS(0.899)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ES(0.009)PRPLQLPGAEGPAIS(0.991)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 264.27 2.871199999999999e-181 1470277100.0 9681.63 11237.56 9553.09 9026.82 13345.51 9573.09 9213.39 8815.26 14653.43 12032.559999999998 14942.55 True False 11315.652450872341 11809.503804500413 10907.861810737759 11238.391305229346 11382.403157690194 10586.108029697152 10887.343702948141 10064.850100601523 11334.451501719324 9314.396339024148 11231.902441599881 1.0074564402342272 1.0514250694309144 0.9711499781495639 1.0005777172356334 1.0133993966625725 0.9425035593693475 0.9693232076717841 0.8960948648667106 1.0091301594411672 0.8292803812581369 1.0 13.45531468935448 -5.76467076169141 24.99930980326276 0.9894231298077446 1.0294407550890605 0.0 0.05989488751381874 111.20400541138866 860357.0570370383 0.005187050950044802 0.017180509971063976 1.7192112259464707e-06 5.76467076169141 0.040017625281315916 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_A549_PD325901_60min_R1 10 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 40 1 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ES(0.008)PRPLQLPGAEGPAIS(0.992)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 294.22 6.342999999999997e-219 2511183100.0 11924.3 12524.299999999997 11473.910000000002 12333.429999999998 14841.520000000002 14896.27 12764.029999999999 14965.839999999998 14419.750000000002 14187.51 15025.09 True False 13134.846157794296 13579.766715034664 12252.598530825877 13095.237959848173 13799.10283566444 14774.959715962577 13249.772146395217 14667.33458072565 13813.73805353139 13291.708197344398 13177.09918189296 0.996793450249147 1.030558131769625 0.9298403511800635 0.9937876143364486 1.0472033825643654 1.121260416424981 1.0055150958112329 1.1130928270525935 1.0483140380785214 1.008697590711689 1.0 13.685745188703603 -6.702738808168418 6.23356035566628 1.0378824654355465 0.9860433772203607 0.28943526995606095 0.044133638712680404 0.25068898116427596 19.466322069234298 0.006619844688406865 0.013807597552879091 1.982719107123465e-07 6.702738808168418 -0.05183908821518579 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGRR ddPTM_A549_MK2206_60min_R1 1 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR 41 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR 122.55 2.6112e-22 24282000.0 1324.6 1688.9 1895.1 1492.0 3293.4 2189.0 1537.0 1982.2 3414.8 3244.2 3212.9 True False 1548.1600966392546 1774.857796124849 2163.853676405133 1857.5400669784242 2808.9452227405977 2420.6385270593996 1816.253004749749 2263.182920232908 2641.3532523150657 2511.332966805246 2415.048258471028 0.6410472715023086 0.7349160787571654 0.8959877587601802 0.7691523597770409 1.16310107381413 1.002314764754188 0.7520566093779105 0.9371170585492705 1.0937061994725157 1.0398686477574473 1.0 11.237836302526953 -4.465005381939962 0.4099645100074275 1.0317018544373446 7.847392268471986e-14 0.4943237670785512 0.11344730060320758 5.378339179938262 0.3738059386428649 0.02676291087584869 3.1278649049608376 3.427635388659143e-05 4.465005381939962 -1.0317018544372663 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGRR ddPTM_A549_PD325901_60min_R1 2 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR 41 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR 201.24 8.206499999999998e-99 104048000.0 4860.4 4574.7 5389.5 4369.6 5177.0 6078.5 5891.4 6109.1 5782.2 6340.6 6973.4 True False 5353.824229962631 4960.226023911046 5755.263879696293 4639.50026791838 4813.385379680434 6028.9987113202515 6115.600450897779 5987.249208003761 5539.194242142143 5940.253433906435 6115.716008024737 0.8754206740367948 0.8110621908215628 0.9410613364231635 0.7586193115950217 0.7870518142707331 0.985820581500073 0.999981104889958 0.9789939886266125 0.9057311089779003 0.9713095614825691 1.0 12.578305699319104 -7.268130966152531 24.999999879464536 0.9620108780773926 0.8350216003590628 0.6447623083006012 0.050975124630723914 310.41173139842044 1159708.2556003053 0.008384484238240427 0.013590764268796164 5.3934795183725295e-08 7.268130966152531 -0.1269892777183298 ESPS(ph)PAPKPR ddPTM_A549_MK2206_60min_R1 1 ESPSPAPKPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 ES(0.373)PS(0.627)PAPKPR 60.301 0.0022519000000000003 13137000.0 2804.4 3412.3 2635.1 2152.2 3573.4 2922.1 2649.9 2873.3 4083.5 4214.8 4295.9 True False 3277.7141590028127 3585.9714948882806 3008.796803701741 2679.4890966159305 3047.757593654355 3231.3146824670057 3131.352529138813 3280.5990741122027 3158.59377000954 3262.6737526942698 3229.109469191596 1.0150520415225766 1.1105140686933803 0.9317729338098252 0.8297919665407744 0.943838424411594 1.0006829168526026 0.96972634685028 1.0159454504134533 0.978162493450645 1.0103942848091416 1.0 11.656920634868497 -7.277944910390004 23.464417693245423 0.990659600005654 0.9647215120706086 0.04675023974998027 0.06419235876508445 1245.4574099358633 1770549.3481755892 0.010179143543399443 0.016308733588244747 5.2729674398956646e-08 7.277944910390004 -0.025938087935045373 ESPVFAPVYFPEELHR ddPTM_A549_MK2206_60min_R1 1 ESPVFAPVYFPEELHR 16 0 P09601;B1AHA8 P09601 HMOX1 Heme oxygenase 1 0 53.828 0.03088 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ESPVFAPVYFPEELHR ddPTM_A549_PD325901_60min_R1 1 ESPVFAPVYFPEELHR 16 0 P09601;B1AHA8 P09601 HMOX1 Heme oxygenase 1 0 52.453 0.018775 1190600.0 327.16 204.8 292.45 248.85 331.68 179.61 367.68 440.51 374.61 257.8 308.08 False True 360.3730423575375 222.05921474566247 312.2974156447128 264.2208993206445 308.3839410338819 178.14731570950568 381.67226360221593 431.72368247659045 358.86644444136647 241.5224640035767 270.18811308002705 1.3337857030401576 0.8218689275937566 1.155851795568125 0.977914595533612 1.1413675365597657 0.6593454970268814 1.4126167848441518 1.5978633462261833 1.328209595716277 0.8939048474424932 1.0 8.077820394498536 -7.8002955822065685 24.999992393974765 1.216751639364899 1.0166985722291473 0.1790224598936494 0.24305976232467413 249.1009150597137 160270.03940854914 0.03817860712789069 0.052751819216323576 1.583814876104642e-08 7.8002955822065685 -0.20005306713575166 ESQDTVAENDDGGFS(ph)EEWEAQRDSHLGPHR ddPTM_A549_MK2206_60min_R1 1 ESQDTVAENDDGGFSEEWEAQRDSHLGPHR 30 1 P49768;P49768-2;P49768-7;E7ES96 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin 1 ESQDTVAENDDGGFS(0.5)EEWEAQRDS(0.5)HLGPHR 40.937 0.030874000000000002 1109900.0 211.83 0.0 0.0 124.64 284.83 0.0 148.24 0.0 158.1 116.28 195.13 True False 247.58172525373197 0.0 0.0 155.17680559530223 242.93188431201935 0.0 175.17328915035958 0.0 122.29060243382098 90.01226724003271 146.67383568596946 1.6879747099803648 0.0 0.0 1.0579719611856182 1.6562727985933332 0.0 1.1943049578754306 0.0 0.8337588081874855 0.613690006939957 1.0 7.196467729547801 -8.98862234641755 20.933078004776327 0.9266608627252803 0.6728718618587295 0.0 0.6275537870702392 29.88121478997148 54983.98267015302 0.10521215292209654 0.10584158145585651 1.026544200045392e-09 8.98862234641755 -0.25378900086655076 ESQDTVAENDDGGFS(ph)EEWEAQRDSHLGPHR ddPTM_A549_PD325901_60min_R1 1 ESQDTVAENDDGGFSEEWEAQRDSHLGPHR 30 1 P49768;P49768-2;P49768-7;E7ES96 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin 1 ESQDTVAENDDGGFS(0.5)EEWEAQRDS(0.5)HLGPHR 128.33 1.1139999999999999e-27 3296800.0 215.32 0.0 136.71 283.62 216.25 152.42 156.19 161.06 116.38 210.71 154.93 True False 237.17912788979385 0.0 145.98796270401337 301.13856325224515 201.0613460220001 151.17874205468993 162.13389592044746 157.8475319508743 111.48895332235179 197.40573464000647 135.87459218218834 1.7455737977249688 0.0 1.0744316531840217 2.2162978259280552 1.4797567579993591 1.1126343757630635 1.1932613251420041 1.1617148534968436 0.8205283381668671 1.452852453645739 1.0 7.08613189488845 -8.623801015130404 4.765604028048384 0.915748179767391 1.240160971007916 0.0 0.5355747660792555 0.4505722075307411 17.424799524385556 0.08801723504056318 0.09987687118743914 2.3779295558649204e-09 8.623801015130404 0.324412791240525 ESQDTVAENDDGGFSEEWEAQRDS(ph)HLGPHR ddPTM_A549_PD325901_60min_R1 1 ESQDTVAENDDGGFSEEWEAQRDSHLGPHR 30 1 P49768;P49768-2;P49768-7;E7ES96 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin 1 ESQDTVAENDDGGFS(0.154)EEWEAQRDS(0.846)HLGPHR 101.58 1.2879e-14 2465000.0 280.16 224.77 166.59 190.87 278.26 165.23 0.0 223.95 197.06 275.63 268.36 True False 308.6016369571085 243.71215673038355 177.89579918704982 202.6596064027785 258.7159775448866 163.88442166183188 0.0 219.48314156462365 188.7782534946095 258.2266747606899 235.35342127420165 1.3112264750023244 1.03551567430347 0.7558666376036656 0.8610862986634353 1.0992658451455697 0.6963332879316683 0.0 0.9325683067462694 0.8021054143702924 1.097186832307993 1.0 7.878685015053637 -5.4260147547452675 2.7368315738777405 0.8345192993788798 1.3299253257875305 0.21636952294529654 0.28644969579970536 0.41487524074260707 4.989794951692323 0.03951343422868656 0.3825455135359794 3.749602631079191e-06 5.4260147547452675 0.4954060264086507 ESQIDVLQQDELDS(ph)YPDSVK ddPTM_A549_PD325901_60min_R1 2 ESQIDVLQQDELDSYPDSVK 20 0 Q9NQS3 Q9NQS3 PVRL3 Nectin-3 1 ESQIDVLQQDELDS(0.989)Y(0.009)PDS(0.003)VK;ESQIDVLQQDELDS(0.979)Y(0.017)PDS(0.003)VK 110.94 1.2267e-10 5863500.0 2086.6000000000004 2127.19 2607.6 2080.0 2503.8999999999996 2597.3 2477.48 2156.3 2598.5 2433.0 2744.8 True False 2298.4300959262687 2306.4557666739556 2784.567416772623 2208.4768759772583 2328.034701986062 2576.1484499320695 2571.7618571290745 2113.2909049153736 2489.294081527163 2279.379964781622 2407.2070007207794 0.9548119855243276 0.9581460032242112 1.156762761133069 0.9174436910976014 0.9671103072103848 1.070181521223852 1.068359246362703 0.8779016114038386 1.0341005492181623 0.9468981953355559 1.0 11.233144492146566 -5.576254645400074 24.999999462673863 1.0129514654657483 0.9556342143625236 0.04764866771040721 0.07475252226264392 146.30768823006505 68526.57494749367 0.009091433579823663 0.035210986822826654 2.6530495096115817e-06 5.576254645400074 -0.05731725110322472 ESQIDVLQQDELDS(ph)YPDSVKK ddPTM_A549_MK2206_60min_R1 2 ESQIDVLQQDELDSYPDSVKK 21 1 Q9NQS3 Q9NQS3 PVRL3 Nectin-3 1 ESQIDVLQQDELDS(1)YPDSVKK;ESQIDVLQQDELDS(1)YPDSVKK 224.79 4.572e-76 42951000.0 7836.9 10345.900000000001 8204.8 7452.2 13001.900000000001 10463.4 9514.1 8932.2 14137.2 13159.0 14103.0 True False 9159.577126190674 10872.462119088206 9368.364014652965 9277.989334541968 11089.33773351278 11570.63004295721 11242.688817494853 10198.366703715252 10935.146772469416 10186.372760677594 10600.835877001113 0.8640429143953355 1.025623096634898 0.8837382375646398 0.8752129966157568 1.046081446989618 1.0914828016590747 1.060547389653137 0.9620342039103698 1.0315362768886558 0.9609027890694251 1.0 13.371890405475638 -6.767949484129492 24.999707479630427 1.02234913607785 0.9182295020056189 0.48519793856264104 0.05419566983875787 98.41977394619957 377947.3622741725 0.0072904844353877535 0.014012509682228462 1.7062808470843906e-07 6.767949484129492 -0.10411963407223113 ESQIDVLQQDELDS(ph)YPDSVKK ddPTM_A549_PD325901_60min_R1 2 ESQIDVLQQDELDSYPDSVKK 21 1 Q9NQS3 Q9NQS3 PVRL3 Nectin-3 1 ESQIDVLQQDELDS(0.997)YPDS(0.002)VKK;ESQIDVLQQDELDS(1)YPDSVKK 158.8 6.606e-28 58010000.0 4575.700000000001 4654.2 4288.0 4582.5 5439.0 5203.9 5077.6 5477.6 5467.1 5090.3 6455.200000000001 True False 5040.221695547695 5046.42576791632 4579.009465838703 4865.550617387397 5056.98340353137 5161.521163747546 5270.830846569331 5368.3449709059305 5237.336799352377 4768.897589283969 5661.251322884282 0.8903017032954852 0.8913975868757719 0.8088334547751185 0.8594479099911267 0.8932624812273745 0.9117279677874935 0.9310363638623906 0.9482611996407321 0.9251199956768692 0.8423751777291388 1.0 12.46690525605708 -8.946980730960904 0.21142517867910537 1.0300525167064694 0.8343795118527262 0.0 0.05259621259879383 0.9625887351094776 0.16925045365824384 0.07040570397909954 0.05539683992871783 1.1298460432503379e-09 8.946980730960904 -0.19567300485374317 ESQIDVLQQDELDSY(ph)PDS(ph)VKK ddPTM_A549_PD325901_60min_R1 1 ESQIDVLQQDELDSYPDSVKK 21 1 Q9NQS3 Q9NQS3 PVRL3 Nectin-3 2 ESQIDVLQQDELDS(0.503)Y(0.626)PDS(0.871)VKK 60.521 0.00070484 2778400.0 2539.1 2177.0 2175.5 2121.4 2723.4 2453.1 2124.1 2467.5 2603.0 2338.0 2569.9 True False 2796.867562813374 2360.463430182165 2323.142512344239 2252.4340599510356 2532.117779219955 2433.122766922713 2204.9337878521196 2418.2837767836954 2493.604962176334 2190.3782809944228 2253.8185919383327 1.2409461758889866 1.0473174010655915 1.0307584295621088 0.9993856950190004 1.1234789651115085 1.0795557262797155 0.9783102312399636 1.072971793485792 1.1063911581418715 0.9718520775492628 1.0 11.138155683471538 -13.389477254103697 0.008594898528005029 7.082553825143895e-06 2.025602133763493 0.21174133696468145 0.06676249058895554 16683.927875228077 14.893488581520648 1927.9683386121894 1596.1102332485236 4.0787092319114944e-14 13.389477254103697 2.0255950512096677 ESQIDVLQQDELDSYPDS(ph)VKK ddPTM_A549_PD325901_60min_R1 2 ESQIDVLQQDELDSYPDSVKK 21 1 Q9NQS3 Q9NQS3 PVRL3 Nectin-3 1 ESQIDVLQQDELDS(0.069)Y(0.022)PDS(0.908)VKK;ESQIDVLQQDELDS(0.027)YPDS(0.973)VKK 145.18 4.995099999999999e-22 17976100.0 5053.9 5449.4 5266.6 5536.5 6587.1 5108.700000000001 5728.799999999999 6042.0 5892.4 6167.4 6005.9 True False 5566.9682075154615 5908.640062670965 5624.023146638557 5878.4770306962 6124.444820261353 5067.096440984084 5946.812618919642 5921.487570142691 5644.762919372964 5777.989311464934 5267.212374536918 1.0569097677601993 1.121777449345858 1.067741861677451 1.1160508847363542 1.1627487909674044 0.9620072403914741 1.1290246521420113 1.1242165967654372 1.071679385221151 1.0969729148187084 1.0 12.362823914936996 -10.136928729549831 0.6505601093609507 0.9992367923442731 1.0932868654130297 0.0 0.05772457112545869 0.6694325238822227 0.5406289130198247 0.0313527004906525 0.010682962402491008 7.295772286331711e-11 10.136928729549831 0.09405007306875657 ESQLAHIKDEPPPLS(ph)PAPLTPATPSSLDPFFSR ddPTM_A549_MK2206_60min_R1 1 ESQLAHIKDEPPPLSPAPLTPATPSSLDPFFSR 33 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 ESQLAHIKDEPPPLS(0.999)PAPLT(0.001)PATPSSLDPFFSR 88.344 2.9975999999999997e-09 19307000.0 6651.7 7328.7 7214.8 6581.9 11316.0 8534.2 7965.6 7288.2 11682.0 8924.8 8358.8 True False 7774.344341548644 7701.6995265913765 8237.967128134533 8194.46579547272 9651.431390214551 9437.283379456527 9412.846411603508 8321.324669176403 9036.045652320663 6908.681481457206 6283.079268856055 1.2373462133582311 1.2257842368418195 1.3111353168769426 1.304211747906957 1.5360989376745144 1.5020156480016447 1.4981263181352926 1.3244023054783847 1.4381556026374682 1.0995693649294118 1.0 12.617256066252411 -10.745634957897385 0.8969465387694008 0.9896483425373237 1.380254921551364 0.5800100862010944 0.10565920568403296 0.33727762057927196 0.46113235784108325 0.08891711252985947 0.02049800829320229 1.7962428073142106e-11 10.745634957897385 0.3906065790140403 ESQLAHIKDEPPPLS(ph)PAPLTPATPSSLDPFFSR ddPTM_A549_PD325901_60min_R1 2 ESQLAHIKDEPPPLSPAPLTPATPSSLDPFFSR 33 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 ESQLAHIKDEPPPLS(0.991)PAPLT(0.009)PATPSSLDPFFSR;ESQLAHIKDEPPPLS(1)PAPLTPATPSSLDPFFSR 159.81 3.6676e-51 108218000.0 21347.8 22646.9 21733.5 24220.2 32045.1 28356.8 28338.1 30153.5 33059.8 31387.0 33233.0 True False 23515.01294058025 24555.433742302474 23208.466004152415 25716.226745934793 29794.362725593503 28125.87162246707 29416.52190270332 29552.064787536878 31670.41157455135 29405.219463461075 29145.55168134426 0.8068131012813166 0.8425105144954292 0.7962953063265532 0.8823379645407591 1.0222610658169335 0.9650142131456076 1.0092971381815532 1.0139476895355124 1.0866293395579547 1.0089093452392266 1.0 14.830988089493976 -6.6678699421959 2.2534786736473205 1.0320711621744068 0.8162160534526606 0.882290791899317 0.03237129157294131 0.08240942904156191 0.8481851439090914 0.005978697544077898 0.014104744647237794 2.148473779440726e-07 6.6678699421959 -0.21585510872174618 ESQS(ph)PDTTIQR ddPTM_A549_MK2206_60min_R1 2 ESQSPDTTIQR 11 0 Q92973-3;Q92973-2;Q92973;E7EW37 Q92973-3 TNPO1 Transportin-1 1 ES(0.049)QS(0.667)PDT(0.27)T(0.014)IQR;ES(0.029)QS(0.859)PDT(0.056)T(0.056)IQR 86.772 0.00031073 3859100.0 1235.06 1598.35 1179.4499999999998 1386.08 1720.54 1247.05 995.18 1126.87 1598.75 1761.4 1749.1799999999998 True False 1443.5079336820763 1679.69918789517 1346.713745256733 1725.6696622234963 1467.4508451855565 1379.0120032752054 1175.991324181428 1286.6072733946394 1236.635677679135 1363.4985166545714 1314.8103310879112 1.097883017459771 1.277522048754621 1.0242646512690725 1.31248562733427 1.1160931812661878 1.0488296073352055 0.8944189868118693 0.9785497139576506 0.9405430185933417 1.0370305772744988 1.0 10.36063898217617 -7.330642801654649 2.677857810587181 0.9668840421714221 1.1758481920277544 0.5659495261405671 0.08168109650835045 0.13212530811220444 1.8577112864480656 0.010897841644044427 0.01869489152999753 4.670433560123015e-08 7.330642801654649 0.20896414985633227 ESQS(ph)PDTTIQR ddPTM_A549_PD325901_60min_R1 2 ESQSPDTTIQR 11 0 Q92973-3;Q92973-2;Q92973;E7EW37 Q92973-3 TNPO1 Transportin-1 1 ES(0.013)QS(0.96)PDT(0.023)T(0.004)IQR;ES(0.02)QS(0.915)PDT(0.026)T(0.039)IQR 71.241 0.0026156 4757900.0 1762.08 1413.31 1525.08 2238.32 1588.82 2079.2 1260.3799999999999 1766.9 1347.69 1530.6999999999998 1549.25 True False 1940.9650644252654 1532.414593711877 1628.5810998510478 2376.57594280645 1477.2267643314417 2062.267684556563 1308.3444506064002 1731.6577933937654 1291.0512760182187 1434.051340769104 1358.7020715049064 1.4285435380807516 1.127851812292128 1.198630026409853 1.7491516298154608 1.0872337617732906 1.5178218446906342 0.9629369661277326 1.2744941144277282 0.9502092497645512 1.05545680016572 1.0 10.408013429447884 -8.192457086797283 1.147009361187472 0.9780251827981743 1.3377162212398233 0.30110362457009976 0.20410312402085423 0.33077831040164707 0.8533580505724359 0.035315969338324225 0.047814768807245084 6.420116563808826e-09 8.192457086797283 0.35969103844164896 ESREERLS(ph)PR ddPTM_A549_MK2206_60min_R1 3 ESREERLSPR 10 2 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 ES(0.002)REERLS(0.998)PR;ES(0.001)REERLS(0.999)PR;ES(0.021)REERLS(0.979)PR 95.18299999999999 0.00018471 47819000.0 3213.63 3152.71 2722.54 2722.4399999999996 3062.4700000000003 2367.42 2317.4300000000003 1836.9699999999998 3711.15 5484.3 4772.29 True False 3756.012178289905 3313.169472686821 3108.637110527168 3389.437922214975 2611.984719829479 2617.9388130337898 2738.4770337002014 2097.366122984685 2870.58045048877 4245.392820988228 3587.198684496465 1.0470599787302097 0.9236091346169443 0.8665918405808981 0.9448704184866611 0.728140521214571 0.7298003381714748 0.763402664462284 0.5846807794754452 0.800229009587662 1.1834841597529615 1.0 11.80864193885061 -5.110984932589391 1.1924282827692785 0.8479690601826947 1.1916977339266923 0.13962898104462285 0.15123718906001893 3.119952611548205 2.892802448097186 0.020625739013598533 1.4390891263110077 7.744886674424098e-06 5.110984932589391 0.3437286737439976 ESREERLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ESREERLSPR 10 2 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 ES(0.405)REERLS(0.595)PR;ESREERLS(1)PR 111.12 3.4722e-05 37649000.0 2923.31 2435.81 2398.29 2489.48 2781.12 2812.8399999999997 2781.75 2887.08 2937.4700000000003 2928.8500000000004 3825.95 True False 3220.0822791729183 2641.0842571759395 2561.0523814893427 2643.2495255807034 2585.7837255431427 2789.933163634129 2887.611018482009 2829.494924529554 2814.0183512270905 2743.9219111593316 3355.382404695302 0.9596766898064872 0.7871187061958064 0.7632669164341966 0.7877640181583815 0.7706375648643704 0.8314799409241939 0.8605907375687718 0.8432704780743155 0.8386580162336603 0.8177672706752195 1.0 11.712261480869591 -10.64936155128679 0.44857791925281704 1.0428942892530535 0.8125169382739966 0.0 0.07469209109587412 0.8898948379602692 0.2411626477814059 0.09250590514833919 0.014011133128585946 2.2420146635970142e-11 10.64936155128679 -0.23037735097905687 ESRIS(ph)VQER ddPTM_A549_MK2206_60min_R1 2 ESRISVQER 9 1 P25942 P25942 CD40 Tumor necrosis factor receptor superfamily member 5 1 ES(0.005)RIS(0.995)VQER;ES(0.013)RIS(0.987)VQER 83.314 0.00040239 6421700.0 781.5699999999999 655.74 524.2 578.09 904.87 682.48 576.79 529.69 774.4300000000001 766.46 855.99 True False 913.4799084480917 689.1143651080039 598.5394423363259 719.722075951446 771.7648216740405 754.699580606441 681.5852769093087 604.7751796075917 599.0228415105883 593.3161536704115 643.4240588778405 1.4197167417725105 1.0710111871008512 0.9302410037016718 1.1185812311816137 1.1994652842482014 1.1729427431151236 1.0593095914038761 0.9399324928296058 0.9309922954315853 0.922123046976485 1.0 9.329626071949416 -8.031434445593996 3.750827433221023 0.9648406620308144 1.1383736934141109 0.41425927579871114 0.11178628517274104 0.19897990195635568 5.964014646086048 0.017915002273529983 0.024091983484764528 9.301769093374816e-09 8.031434445593996 0.17353303138329645 ESRIS(ph)VQER ddPTM_A549_PD325901_60min_R1 1 ESRISVQER 9 1 P25942 P25942 CD40 Tumor necrosis factor receptor superfamily member 5 1 ES(0.236)RIS(0.764)VQER 59.11600000000001 0.0027804 3000300.0 497.18 447.33 497.68 547.18 575.67 471.91 631.97 545.14 516.71 704.61 534.58 True False 547.6533475954286 485.0280690047718 531.4555575929585 580.9780658640559 535.2369251536868 468.0669214212616 656.0199641772532 534.2667550459428 494.99447560742715 660.1208043505054 468.8300489818257 1.1681276590201208 1.0345498759265195 1.1335782737201652 1.2392082528109831 1.1416438138214033 0.9983722725063775 1.3992703018971464 1.1395744709756301 1.0558079130858264 1.408017267203995 1.0 8.872921229943925 -8.84925206305738 3.2317382127111594 1.0234853048795425 1.157271128755619 0.0 0.15228204742862692 0.23792620586243873 4.738514614954259 0.01753333108197645 0.018562088841377215 1.4149722964227042e-09 8.84925206305738 0.13378582387607652 ESRPES(ph)IIIYR ddPTM_A549_MK2206_60min_R1 3 ESRPESIIIYR 11 1 Q96HH4;C9J1P0;C9JZB1 Q96HH4 TMEM169 Transmembrane protein 169 1 ES(0.092)RPES(0.908)IIIYR;ES(0.027)RPES(0.973)IIIYR;ES(0.065)RPES(0.935)IIIYR 61.235 0.0038561 8265600.0 2863.2 2619.23 2320.15 2510.8 3479.6099999999997 3003.09 3215.33 2654.05 4498.6 3516.46 4169.68 True False 3346.4381614808344 2752.5376193641346 2649.182157834083 3125.946112714096 2967.7639784114954 3320.874990510194 3799.5138410943473 3030.2697151872394 3479.674282788028 2722.0892437124626 3134.233378686379 1.0677054823796799 0.878217186404217 0.8452408732065794 0.9973558873986096 0.9468867247069347 1.0595493663914843 1.2122625797211057 0.966829635531891 1.1102154378326576 0.868502410261914 1.0 11.61389689323386 -7.251604122874396 6.1273523954928555 1.0600675001393092 0.9399518120775315 0.1441663917264946 0.098669217955382 0.1469959321650086 24.790080217855518 0.01212538860785582 0.020505061650402556 5.6026807599292285e-08 7.251604122874396 -0.12011568806177764 ESRPES(ph)IIIYR ddPTM_A549_PD325901_60min_R1 1 ESRPESIIIYR 11 1 Q96HH4;C9J1P0;C9JZB1 Q96HH4 TMEM169 Transmembrane protein 169 1 ES(0.002)RPES(0.998)IIIYR 76.759 0.00033514 2155400.0 635.37 548.57 715.24 473.91 653.13 736.84 632.36 566.55 658.2 732.49 921.84 True False 699.8722946653276 594.7999191065823 763.7804874875175 503.1823443722994 607.2564019761801 730.8394193385238 656.4248058406694 555.2497158001232 630.5381429521567 686.2404563924742 808.4595240252276 0.8656862512803899 0.7357200965920241 0.9447355925560029 0.6223964582259011 0.7511277731663298 0.9039901165363949 0.8119451702076627 0.6867996471061388 0.7799254312853899 0.8488247537437142 1.0 9.659031735953771 -10.590440497549531 0.8365570162731507 1.002850955869685 0.7875842574176117 0.16094141775797133 0.09873648380753088 0.46057145196897353 0.5656457133629023 0.061560077417297576 0.01616065001632429 2.5677899955154628e-11 10.590440497549531 -0.21526669845207325 ESRPGLVTVTSSQS(ph)TPAK ddPTM_A549_PD325901_60min_R1 1 ESRPGLVTVTSSQSTPAK 18 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ESRPGLVTVTSS(0.002)QS(0.499)T(0.499)PAK 158.0 3.3911000000000005e-23 41557000.0 7232.4 7188.8 6225.1 7069.5 7851.8 7511.0 7267.7 7247.8 7667.6 8696.6 8582.0 True False 7966.627923788522 7794.625405095798 6647.5727205672865 7506.166959000595 7300.316655239494 7449.832906264111 7544.27630053804 7103.236943210892 7345.357436797258 8147.495191828963 7526.468405780287 1.058481547291183 1.0356285291929967 0.883226018123186 0.9973026596691617 0.9699524746071997 0.9898178673735852 1.0023660359411164 0.9437675892926946 0.9759367927667195 1.08251237533552 1.0 12.87775736222466 ESRPGLVTVTSSQST(ph)PAK ddPTM_A549_PD325901_60min_R1 1 ESRPGLVTVTSSQSTPAK 18 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ESRPGLVTVTSSQS(0.134)T(0.866)PAK 129.32 7.212e-13 38097000.0 5450.1 6241.3 5454.3 6949.2 6944.1 6879.2 6266.9 7149.8 6710.9 7613.3 7607.7 True False 6003.390139848433 6767.2762548442515 5824.461597370347 7378.436301221713 6456.37037184449 6823.178075991487 6505.390308879266 7007.191630090405 6428.864210783389 7132.59493870609 6672.001129183719 0.8997885377430854 1.01427984255635 0.8729707151717667 1.1058805534291662 0.9676812468756866 1.0226584114541755 0.97502835849717 1.0502383759260085 0.9635586215150902 1.0690338326694382 1.0 12.703903817609474 -6.222919467779193 24.999744352109445 0.9950736702103604 0.9375397552655131 0.26773357902247574 0.05657283055811134 648.5606915680729 420920.81364524405 0.006590236594708934 0.017435818859512855 5.985225701823013e-07 6.222919467779193 -0.057533914944847275 ESRPGLVTVTSSQST(ph)PAKAPR ddPTM_A549_MK2206_60min_R1 2 ESRPGLVTVTSSQSTPAKAPR 21 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ESRPGLVTVTSSQS(0.041)T(0.959)PAKAPR;ESRPGLVTVTS(0.001)S(0.003)QS(0.052)T(0.944)PAKAPR 93.76700000000001 6.106100000000001e-07 26729000.0 4150.1 4680.5 4049.9 4314.1 6062.700000000001 4782.4 5213.799999999999 5419.4 7088.4 6713.9 7802.2 True False 4850.535419796596 4918.717457968117 4624.2367178899 5371.054693667311 5170.884861210128 5288.470393699807 6161.079971479659 6187.616546216435 5482.888717848807 5197.225326993938 5864.69841023457 0.8270732918391605 0.8386991306124782 0.7884867037357076 0.9158279450984566 0.8816966362986958 0.9017463514357057 1.0505365392238875 1.055061337070349 0.9348969604780595 0.8861879952640337 1.0 12.517841204809093 -7.003382667192947 1.192962722315592 0.9802250628639383 0.8257810357052859 0.5869300560662656 0.05386373952994683 0.2254225934837652 0.6321666155499996 0.008107093235534804 0.01995735858367324 9.922413756643412e-08 7.003382667192947 -0.15444402715865235 ESRPGLVTVTSSQST(ph)PAKAPR ddPTM_A549_PD325901_60min_R1 2 ESRPGLVTVTSSQSTPAKAPR 21 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ESRPGLVTVT(0.001)S(0.003)S(0.029)QS(0.282)T(0.684)PAKAPR;ESRPGLVTVTS(0.001)S(0.003)QS(0.05)T(0.946)PAKAPR 72.227 0.00016195 53228000.0 3344.1000000000004 3119.3 4459.5 4180.2 4677.5 4337.6 4091.7 4776.6 4861.200000000001 4802.799999999999 5314.700000000001 True False 3683.5905702036966 3382.1743581843007 4762.148487151981 4438.40146007699 4348.968536498982 4302.276023726698 4247.411882564152 4681.326965829791 4656.900669278368 4499.550388349024 4661.025592659115 0.7902961476987317 0.7256287894044302 1.021695417131399 0.9522370928551116 0.9330497011963187 0.9230320533966967 0.9112612231208547 1.0043555592577413 0.999115018079445 0.9653562931376289 1.0 12.186431719079605 -3.8685131357777833 0.43774919683596564 0.9951728448077849 1.6285456068847978e-16 0.540356167302511 0.060311503626733855 6.676369397639741 0.3385795757342683 0.012027188652461586 4.54622453914442 0.00013535891490617605 3.8685131357777833 -0.9951728448077848 ESRPS(ph)EEREWDR ddPTM_A549_MK2206_60min_R1 3 ESRPSEEREWDR 12 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ES(0.001)RPS(0.999)EEREWDR;ES(0.003)RPS(0.997)EEREWDR;ES(0.042)RPS(0.958)EEREWDR 79.652 0.00029061 19881500.0 1431.3799999999999 1038.25 975.9699999999999 1014.3 2137.7000000000003 1738.9099999999999 1249.5600000000002 1246.01 2310.6 1845.9700000000003 1806.8400000000001 True False 1672.9619501189002 1091.0924902756965 1114.3772215509036 1262.8035455336578 1823.2471617940664 1922.9203020049624 1476.5888774333744 1422.635733245588 1787.2527892699982 1428.964094918156 1358.1517617528677 1.2317930861862814 0.8033656628089211 0.8205100879983088 0.9297956098100916 1.342447297230564 1.4158361062118632 1.0872046254445442 1.047479209105097 1.3159448300264478 1.052138748525346 1.0 10.407428981987842 -6.72787853567841 22.993454242952662 1.171469741856786 0.9271613861788841 0.31699146560253544 0.16388594416519192 78.96533192876923 54100.22264630303 0.025499564586338966 0.0530770829892998 1.8712054095399357e-07 6.72787853567841 -0.244308355677902 ESRPS(ph)EEREWDR ddPTM_A549_PD325901_60min_R1 1 ESRPSEEREWDR 12 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ES(0.025)RPS(0.975)EEREWDR 62.861000000000004 0.0024113000000000003 13036000.0 1102.9 782.21 824.09 880.23 739.38 664.2 410.33 721.71 1162.2 878.23 1234.2 True False 1214.8655960879323 848.1295818662337 880.0177030557412 934.5998079526258 687.4484995225264 658.7909754148083 425.94533269119165 707.3149278794575 1113.356775659368 822.7784079203308 1082.4012242384101 1.1223801016510542 0.7835630290080163 0.813023565891596 0.8634504350364357 0.6351143033917234 0.6086384241465923 0.39351889405972507 0.6534683369165001 1.0285989619447617 0.7601417935380174 1.0 10.080019660835003 -8.768164331471969 24.98261874269898 1.0135050895985578 0.7238926599330006 0.1360578448812747 0.1882088413950726 126.26050632335765 469045.6783435834 0.031113152986497212 0.033487932230152125 1.7054369513893296e-09 8.768164331471969 -0.2896124296655572 ESRPS(ph)EEREWDREK ddPTM_A549_MK2206_60min_R1 4 ESRPSEEREWDREK 14 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ES(0.166)RPS(0.834)EEREWDREK;ES(0.054)RPS(0.946)EEREWDREK;ES(0.002)RPS(0.998)EEREWDREK;ES(0.021)RPS(0.979)EEREWDREK 125.23 1.9188e-07 121806700.0 7242.63 6558.840000000001 4391.93 3971.73 11182.400000000001 8399.0 7133.81 7309.5 11814.9 10302.699999999999 10495.300000000001 True False 8465.008878697241 6892.656940929302 5014.771714956467 4944.804028297733 9537.483773235712 9287.776605195022 8429.930935467672 8345.644009404921 9138.844014518358 7975.312914464092 7889.0273544557795 1.0730104610318207 0.8737017418295907 0.6356641306515546 0.6267951429405136 1.208955596769337 1.177303131031637 1.0685640392292957 1.0578799685225126 1.1584246832857885 1.0109374142250347 1.0 12.945631724647024 -6.767390260617461 24.99994433920438 1.0902596103874824 0.7954914445337578 0.5521512477163228 0.12770946688920656 86.0761186585987 361611.8492228089 0.01937405197593973 0.037304891682800816 1.7084793713781925e-07 6.767390260617461 -0.2947681658537247 ESRPS(ph)EEREWDREK ddPTM_A549_PD325901_60min_R1 2 ESRPSEEREWDREK 14 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ESRPS(1)EEREWDREK;ES(0.006)RPS(0.994)EEREWDREK 173.87 3.0161e-23 153601000.0 10917.900000000001 10226.0 8942.8 9281.7 9152.0 10238.1 7700.700000000001 7959.7 12463.9 13062.6 14002.2 True False 12026.277170666825 11087.780908150125 9549.71218542499 9855.009528729865 8509.195092685984 10154.724308031231 7993.754352484735 7800.937539236145 11940.0856273798 12237.825206722737 12280.018167258999 0.9793370829638754 0.902912418950029 0.7776627082593776 0.8025240186537593 0.6929301713390956 0.8269307235314823 0.6509562317910648 0.6352545601304578 0.9723182380311515 0.9965640962446817 1.0 13.584025074605675 -8.872882938130028 8.87572946985698 0.9877507062497672 0.7821248440197797 0.47413284131030387 0.09673490819141636 0.1698778515531925 12.729495655570554 0.017504472915577805 0.018608561273570055 1.3400378391382455e-09 8.872882938130028 -0.20562586222998758 ESRPSEEREWDREK ddPTM_A549_MK2206_60min_R1 2 ESRPSEEREWDREK 14 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 109.79 3.5379e-06 13705900.0 2531.0 1745.97 1778.1 1955.88 2797.6 2157.8 1930.98 1921.27 3443.8 3603.8 3607.4 False True 2958.170922991057 1834.8324153591702 2030.261317089318 2435.0706878027886 2386.076745958311 2386.1369637682847 2281.814070990025 2193.6159061426083 2663.7847986185484 2789.699077052199 2711.583020824917 1.09093872482323 0.6766646646138749 0.7487365503829096 0.8980254962143818 0.8799571053636482 0.8799793129853626 0.8415062542676093 0.8089798060010226 0.9823725765210657 1.0288082849123008 1.0 11.404919626838486 -8.775561002222627 20.65305769339995 0.9916761655689719 0.8466411610953423 0.3149534182543382 0.09816486224389485 24.161624932372835 35336.131854041516 0.015842924425492268 0.016933624992821906 1.676636814092287e-09 8.775561002222627 -0.1450350044736296 ESRQES(ph)DPEDDDVK ddPTM_A549_MK2206_60min_R1 3 ESRQESDPEDDDVK 14 1 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 ES(0.011)RQES(0.989)DPEDDDVK;ES(0.21)RQES(0.79)DPEDDDVK;ES(0.182)RQES(0.818)DPEDDDVK 87.16 2.2653e-05 52144000.0 2368.98 3181.6800000000003 2952.16 2680.7299999999996 3110.0699999999997 3154.52 2737.2 2525.8 3955.2999999999997 3252.12 3922.67 True False 2768.805907999745 3343.6139219459465 3370.8206792972305 3337.50897034254 2652.5828228848172 3488.329212599093 3234.5138091093104 2883.839884938087 3059.430865316204 2517.4638333045677 2948.5627788155684 0.9390357661341601 1.1339809163870234 1.1432080413940795 1.1319104325407006 0.8996189065204012 1.1830608585516864 1.0969798005822375 0.9780493417530419 1.0376007210350702 0.8537935333755478 1.0 11.525796196041417 -8.249968594067548 24.33275936760055 1.0152740247888117 1.0798139748408238 0.16784252629295981 0.09587096615341022 830.0844853599266 1760842.0161782675 0.012601695332064528 0.01619292566109878 5.623819922791472e-09 8.249968594067548 0.06453995005201207 ESRQES(ph)DPEDDDVK ddPTM_A549_PD325901_60min_R1 3 ESRQESDPEDDDVK 14 1 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 ES(0.236)RQES(0.764)DPEDDDVK;ES(0.177)RQES(0.823)DPEDDDVK;ES(0.111)RQES(0.889)DPEDDDVK 101.64 8.1106e-06 59992300.0 4699.0 4873.3 5513.6 5240.3 5631.4 4595.35 4863.8 4598.22 3950.6200000000003 5286.3 5476.0 True False 5176.039020779035 5283.9900938478395 5887.786051970217 5563.981429415203 5235.869891275336 4557.92699318344 5048.894570573484 4506.504894866193 3784.5891800511226 4952.5221158343975 4802.48671522406 1.0777831002365503 1.1002612619619323 1.2259869524064935 1.158562586290385 1.0902414107003013 0.9490764396566975 1.0513083887495829 0.938369049638473 0.7880478186548304 1.0312411901390002 1.0 12.229565907734175 -7.502375061389464 1.1397612192185704 0.9033157762684262 1.1442617620051216 0.5032609086080995 0.0795217173607993 0.25617526698490495 0.665113963439721 0.01571531647485637 0.029716421973558102 3.145031058268409e-08 7.502375061389464 0.24094598573669546 ESRQES(ph)DPEDDDVKKPALQSSVVATSK ddPTM_A549_PD325901_60min_R1 1 ESRQESDPEDDDVKKPALQSSVVATSK 27 3 Q9H307 Q9H307 PNN Pinin 1 ES(0.044)RQES(0.956)DPEDDDVKKPALQSSVVATSK 218.46 3.5751999999999993e-82 278130000.0 3787.1 4410.0 4451.9 4128.0 5036.8 4740.7 4105.0 4906.3 5312.3 4456.6 4280.0 True False 4171.563604084333 4781.646176896346 4754.032705449472 4382.977184631789 4683.032544016692 4702.0933109740745 4261.218021342191 4808.439997582108 5089.042505020873 4175.209515431885 3753.5871331554013 1.1113538746008982 1.273887086477921 1.266530531143701 1.1676769525121693 1.2476152485315999 1.2526932622505353 1.1352388715591255 1.28102527715667 1.355781103379593 1.1123251884983025 1.0 11.874054257764785 -10.98045004523892 1.257578443458354 1.0002771837095927 1.2446712017747503 0.42684206997197316 0.07450858540514937 0.24771554886309763 0.6982252394713468 0.05154663452544556 0.01191403900150818 1.0460440048473555e-11 10.98045004523892 0.2443940180651576 ESRS(ph)PFLKPDER ddPTM_A549_MK2206_60min_R1 2 ESRSPFLKPDER 12 2 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 ES(0.212)RS(0.788)PFLKPDER;ES(0.312)RS(0.688)PFLKPDER 75.911 0.00024677 33226000.0 3477.9 3958.7 3325.6000000000004 2826.8 4179.6 3590.1 2977.4 3662.5 4675.4 5626.9 5385.2 True False 4064.88449350873 4160.180921025187 3797.2200866724256 3519.3661268998762 3564.786376682641 3970.001999084492 3518.3550399101514 4181.670590935837 3616.42936507961 4355.779381948227 4047.9062160410112 1.0041943356791314 1.0277364886911793 0.9380701735689506 0.8694287710899427 0.8806494484867592 0.9807544412348782 0.869178990849057 1.0330453246087434 0.893407399299038 1.0760573860844844 1.0 11.982960149985836 -5.765863489463711 24.512141339481545 0.940462855735749 1.0159654259168893 0.12174146862388935 0.06628273317711007 91.21693741433084 505414.1134191446 0.007785414828808188 0.0254925367462324 1.7144961354624875e-06 5.765863489463711 0.07550257018114037 ESRS(ph)PFLKPDER ddPTM_A549_PD325901_60min_R1 6 ESRSPFLKPDER 12 2 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 ES(0.004)RS(0.996)PFLKPDER;ES(0.288)RS(0.712)PFLKPDER;ES(0.011)RS(0.989)PFLKPDER;ES(0.271)RS(0.729)PFLKPDER;ES(0.006)RS(0.994)PFLKPDER;ES(0.022)RS(0.978)PFLKPDER 112.34 1.0630999999999999e-05 80246500.0 16465.6 16167.499999999998 15805.399999999998 16266.500000000002 17998.100000000002 16283.3 15582.099999999999 16215.599999999999 18240.999999999996 18590.300000000003 20432.0 True False 18137.175590665945 17529.991964846184 16878.0494895912 17271.244761098125 16733.975546074264 16150.694203510906 16175.085342352299 15892.167137107894 17474.394204786207 17416.505285359566 17918.993529119416 1.012176022118205 0.9782911041492882 0.9419083422382725 0.9638512750747601 0.9338680500598748 0.9013170397804475 0.902678228889744 0.8868894958459687 0.9751883763108286 0.9719577864156669 1.0 14.129201986178998 -8.97159323203839 14.558293003432192 0.9890591944137349 0.9389650748321308 0.2271731785459835 0.03492652982889937 1.898172230131241 972.3424613747923 0.006583945720370608 0.006879035927099946 1.0675955821739122e-09 8.97159323203839 -0.050094119581604146 ESRS(ph)PQQSAALPR ddPTM_A549_MK2206_60min_R1 4 ESRSPQQSAALPR 13 1 E5RJN3;A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4 E5RJN3 NCAPH2 Condensin-2 complex subunit H2 1 ES(0.003)RS(0.997)PQQSAALPR;ES(0.197)RS(0.803)PQQSAALPR;ES(0.019)RS(0.981)PQQSAALPR;ES(0.026)RS(0.968)PQQS(0.007)AALPR 153.36 3.7711e-14 156287000.0 8583.15 10138.490000000002 9004.63 8560.32 11146.499999999998 8762.97 8378.25 8832.18 12320.5 13837.2 14248.6 True False 10031.775882129865 10654.49583600794 10281.621935606549 10657.598784287367 9506.864615679266 9690.26166901128 9900.469575175399 10084.168562416842 9529.92642179565 10711.366909647239 10710.27937864555 0.9366493186098858 0.9947915884669795 0.9599770063987622 0.9950813053053296 0.8876392743437034 0.9047627355390927 0.924389479037795 0.9415411312727225 0.8897925147309117 1.0001015408621232 1.0 13.38670849296437 -4.896509198266844 19.67612100787478 0.9452370363953647 0.0010609732958004833 0.0 0.04225949533916643 5465.116756079575 988826.4716596312 0.006438808143538767 11197.858083348707 1.2690852651984488e-05 4.896509198266844 -0.9441760630995643 ESRS(ph)PQQSAALPR ddPTM_A549_PD325901_60min_R1 4 ESRSPQQSAALPR 13 1 E5RJN3;A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4 E5RJN3 NCAPH2 Condensin-2 complex subunit H2 1 ES(0.025)RS(0.975)PQQSAALPR;ESRS(1)PQQSAALPR;ES(0.046)RS(0.954)PQQSAALPR;ES(0.058)RS(0.942)PQQSAALPR 157.23 6.4502e-19 217874000.0 12121.0 12515.199999999999 12959.600000000002 12907.8 13850.0 13888.2 13180.6 14881.2 13202.9 13574.6 15147.600000000002 True False 13351.514996991416 13569.899826098215 13839.116388405622 13705.085490259262 12877.223779906126 13775.099103818038 13682.194945701067 14584.382791924432 12648.02802732152 12717.497439344266 13284.541228547836 1.0050414814701811 1.0214805007294612 1.0417459022721862 1.0316566642743896 0.9693389902116902 1.0369269714949596 1.0299335679201846 1.097846176319834 0.9520861736754236 0.9573155158730645 1.0 13.697460785870353 -8.810592139353096 24.999995160931057 0.9773740282182342 1.0277669655396962 0.411983352611074 0.031237845788791612 92.79217080091077 47195.36539364289 0.005666097275159078 0.006032022650251691 1.5467063219318552e-09 8.810592139353096 0.050392937321461995 ESS(ph)ETPDQFMTADETR ddPTM_A549_MK2206_60min_R1 1 ESSETPDQFMTADETR 16 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 ES(0.169)S(0.456)ET(0.375)PDQFMTADETR 63.211999999999996 0.001216 2092300.0 783.06 917.26 747.52 741.76 1228.3 967.62 947.93 1113.0 1503.1 1153.5 1424.4 True False 915.2213840210891 963.9446160657693 853.5295763739989 923.4912332988714 1047.6186971191717 1070.0129061458272 1120.156610795335 1270.7711584195472 1162.6502499574717 892.9235488594575 1070.6821685599084 0.854802116721606 0.9003088352188554 0.7971829562847912 0.8625260235173131 0.9784590870026745 0.9993749196225231 1.0462083367858557 1.1868799123915204 1.0858967152887793 0.8339762957484009 1.0 10.064314565036446 -6.998269649088641 1.7434544767824027 1.053453735511992 0.8498931255502872 0.4638119985936191 0.08399873440309072 0.15029193903037555 0.9095180643750067 0.00921754370498821 0.019632352369167622 1.0039922280104662e-07 6.998269649088641 -0.20356060996170477 ESS(ph)ETPDQFMTADETR ddPTM_A549_PD325901_60min_R1 2 ESSETPDQFMTADETR 16 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 ES(0.11)S(0.64)ET(0.25)PDQFMTADETR;ES(0.001)S(0.999)ETPDQFMTADETR 159.13 2.3966e-20 3664100.0 1249.27 1145.1299999999999 954.37 1246.18 1517.5300000000002 960.01 1100.4699999999998 1620.35 1320.25 1288.4 1396.29 True False 1376.0949707360328 1241.6341239340848 1019.1392872930237 1323.1537083198757 1410.9439279942924 952.1919968503009 1142.3489880502896 1588.0308481100149 1264.764483793048 1207.0502041202806 1224.5551818115775 1.1237508861791519 1.0139470579816918 0.8322526435969455 1.0805178304520617 1.152209348301459 0.7775819424010365 0.9328685264802243 1.2968226109342986 1.0328358432341005 0.9857050315483533 1.0 10.258042071820123 ESS(ph)KVDANEEVEALIVK ddPTM_A549_MK2206_60min_R1 1 ESSKVDANEEVEALIVK 17 1 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 ES(0.047)S(0.953)KVDANEEVEALIVK 220.66 8.832399999999999e-57 10965000.0 2993.5 3301.2 3081.2 3790.7 4316.7 3600.5 3256.9 3386.3 4861.0 4335.7 4628.8 True False 3498.7296159516886 3469.21697943475 3518.160491657168 4719.421670170991 3681.71914829791 3981.502520181531 3848.636572003552 3866.3183951088167 3759.9912614219083 3356.2623587255753 3479.3412116189998 1.005572435456443 0.9970901870301078 1.0111570776411736 1.3564124307241945 1.058165590659256 1.14432654862524 1.1061394493737258 1.1112213950725889 1.0806618358859714 0.9646258169556893 1.0 11.764598452602982 -10.095806701557704 0.7610176366335116 1.004094205426234 1.10076679079894 0.1680121594773747 0.09501484764992683 0.9815557757319217 1.1235012152174546 0.048497805404747046 0.01955179331731196 8.02034958578426e-11 10.095806701557704 0.09667258537270595 ESS(ph)KVDANEEVEALIVK ddPTM_A549_PD325901_60min_R1 1 ESSKVDANEEVEALIVK 17 1 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 ES(0.1)S(0.9)KVDANEEVEALIVK 234.51 5.952799999999999e-66 13881000.0 5948.5 5898.6 6244.0 5763.7 7539.4 6871.0 7014.3 7312.3 7482.1 7210.1 6471.8 True False 6552.387340945751 6395.695723138498 6667.755388222216 6119.710658687563 7009.858553517997 6815.044854072787 7281.2330248722365 7166.450440111624 7167.653356703631 6754.853055516634 5675.809628120351 1.1544409996562368 1.1268340804546242 1.174767271119762 1.0782092881283298 1.2350411681865097 1.200717659786929 1.2828536370913397 1.2626305161128046 1.2628424535580014 1.1901126884260262 1.0 12.470610485552337 -10.861502131434914 1.1247348831443398 1.0007008246683056 1.2012940675652255 0.034676030928009416 0.0806327242579694 0.29415674082229354 0.664306059586006 0.04555319766901654 0.011226478331997528 1.3756180589863162e-11 10.861502131434914 0.20059324289691993 ESS(ph)KVPR ddPTM_A549_MK2206_60min_R1 1 ESSKVPR 7 1 E5RJ29;Q9NYI0-2;Q9NYI0 E5RJ29 PSD3 PH and SEC7 domain-containing protein 3 1 ES(0.106)S(0.894)KVPR 40.352 0.032548 108940000.0 3303.9 3845.0 3934.1 3766.0 5591.9 4180.8 3355.8 4161.7 5417.3 5734.9 8075.1 True False 3861.5175474002967 4040.6940766771513 4492.014536618351 4688.670169062166 4769.338917545138 4623.209481009568 3965.5054218212144 4751.633719671725 4190.290199650464 4439.382106938968 6069.8298085777315 0.6361821779489265 0.6657013794632172 0.7400560935448879 0.7724549644598362 0.7857450814856832 0.7616703642128753 0.6533141038348821 0.7828281631483036 0.6903472307788352 0.7313849394369087 1.0 12.567440350111227 -10.782141612545825 0.7463657107160081 1.0255138730299322 0.7206844442288366 0.019202907163240246 0.0938699859326737 0.2944970354112953 0.2506722425517972 0.05617828835342492 0.010256984795373547 1.6514232227024976e-11 10.782141612545825 -0.30482942880109565 ESS(ph)KVPR ddPTM_A549_PD325901_60min_R1 1 ESSKVPR 7 1 E5RJ29;Q9NYI0-2;Q9NYI0 E5RJ29 PSD3 PH and SEC7 domain-containing protein 3 1 ES(0.059)S(0.941)KVPR 43.083 0.025705000000000002 462640000.0 3668.3 3772.8 4955.9 4682.6 4891.3 5685.7 5027.0 4973.6 4834.8 3881.3 6695.2 True False 4040.703115540269 4090.7470966427522 5292.237176247674 4971.833567043804 4547.751962068944 5639.397544287826 5218.30523587995 4874.39764628628 4631.610169469894 3636.2340556131994 5871.7328443696315 0.6881619485489492 0.6966848126554914 0.9013075554556893 0.846740425496583 0.7745161577692955 0.9604315614759976 0.8887163933018087 0.8301463597684472 0.7887978374069107 0.6192778438651142 1.0 12.519570613730291 -14.999999999999998 0.23012428871521917 1.9930636541506679 0.7955309666739282 0.0 0.1373461096426455 33.85383911442297 0.4238009916761619 15.315271801704876 0.05035933847068714 1.000000000000004e-15 14.999999999999998 -1.1975326874767398 ESS(ph)NPSDR ddPTM_A549_PD325901_60min_R1 1 ESSNPSDR 8 0 Q9Y388 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ES(0.123)S(0.877)NPSDR 54.982 0.021818 33432000.0 355.29 313.75 240.73 284.44 414.03 271.6 201.99 226.39 235.13 229.83 378.24 True False 391.35877924932595 340.1908136057206 257.06738542708734 302.0092127898902 384.94996112595925 269.3881796486929 209.67683998316912 221.87447385048068 225.24830378660062 215.31849457696683 331.71887786091094 1.1797904954128715 1.0255395044124138 0.7749555499668462 0.9104372194232554 1.160470467066297 0.8120978262854454 0.6320919729840826 0.6688629699980844 0.6790337204777558 0.6490993095281404 1.0 8.373817306879083 -7.375081348305247 12.936054044205608 0.8095474451264035 0.9924542659588387 0.403724450469903 0.1503887639849835 0.9683124273422966 105.36353549804801 0.026424439651209424 0.04224350252314022 4.216175222655247e-08 7.375081348305247 0.18290682083243515 ESS(ph)PAARPSPEK ddPTM_A549_PD325901_60min_R1 1 ESSPAARPSPEK 12 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ES(0.154)S(0.846)PAARPSPEK 70.529 0.00083923 13343000.0 4106.1 3436.5 4301.3 3117.5 4172.6 3726.4 3381.9 3735.7 4205.3 3862.3 4185.3 True False 4522.948249248942 3726.1059153977985 4593.2120838181045 3310.0608946437997 3879.530970688543 3696.0534338839843 3510.6000551466896 3661.1885329000434 4028.5658653246787 3618.433718855758 3670.5346328026376 1.2322314599155393 1.0151398333361399 1.2513741302887411 0.9017925794958109 1.0569389363658794 1.0069523390007797 0.9564274435046456 0.9974537497019996 1.0975419845715135 0.9858056334678695 1.0 11.84177449920673 -6.254226319162115 24.997707363520295 1.0273611307717905 1.1511376006023086 0.44966712344545434 0.07716846652293963 488.85686377753154 1694186.2067749274 0.01040188429673574 0.0268863503123155 5.56895464422761e-07 6.254226319162115 0.12377646983051815 ESS(ph)PAEPSQAGAYDR ddPTM_A549_MK2206_60min_R1 1 ESSPAEPSQAGAYDR 15 0 Q15697;V9GZ69;I3L2H2;Q15697-2 Q15697 ZNF174 Zinc finger protein 174 1 ES(0.034)S(0.965)PAEPSQAGAYDR 84.759 0.00015386 3210900.0 924.45 814.41 847.2 887.69 1181.1 815.13 726.5 727.23 1707.4 1177.1 1312.7 True False 1080.4745593674754 855.859990373638 967.3456992509264 1105.1740898499188 1007.3617545937091 901.3865155604968 858.4956460316803 830.31707954847 1320.6766261575328 911.1922924685458 986.7203613230777 1.09501597587252 0.8673784629578627 0.9803645867344096 1.1200479215489263 1.0209191925896346 0.9135177005487572 0.8700495902208171 0.8414917864217487 1.3384507687534273 0.9234554471408115 1.0 9.946497469497963 -8.751098120590598 24.999990749762063 1.159823982276917 0.9632877814394274 0.08318725736479571 0.13282380452668752 201.241400883102 486500.4468934504 0.024705795153621823 0.027864326214869027 1.773788681748372e-09 8.751098120590598 -0.19653620083748957 ESS(ph)PAEPSQAGAYDR ddPTM_A549_PD325901_60min_R1 1 ESSPAEPSQAGAYDR 15 0 Q15697;V9GZ69;I3L2H2;Q15697-2 Q15697 ZNF174 Zinc finger protein 174 1 ES(0.204)S(0.794)PAEPS(0.002)QAGAYDR 49.216 0.025592 3921200.0 637.28 633.52 382.07 503.39 714.87 760.14 683.36 758.72 722.89 514.2 574.49 True False 701.97619645926 686.9089537386333 407.9995677735526 534.4832570183619 664.6599973676173 753.9496718636135 709.3656387489403 743.5867343956745 692.5094472176909 481.73332424607923 503.83137199216003 1.3932760750558884 1.3633707464911933 0.8097938922705697 1.0608375871970888 1.3192112169187429 1.4964325640987388 1.407942574008628 1.4758642985162211 1.3744865558480284 0.9561399925163361 1.0 8.976797146718608 -3.863537587707813 16.112622157460915 1.2302117315946608 1.1897858282535465 0.0 0.22751941460316155 0.0 0.0 0.03167184794744589 0.0 0.00013691858817369124 3.863537587707813 -0.04042590334111429 ESS(ph)PEKEAEEGCPEK ddPTM_A549_MK2206_60min_R1 1 ESSPEKEAEEGCPEK 15 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.026)S(0.974)PEKEAEEGCPEK 126.26 2.1671e-08 20218000.0 3295.6 3640.9 3800.5 3850.4 4539.8 4704.6 4020.2 4964.6 4703.9 4020.0 4624.1 True False 3851.8167103158157 3826.206258458735 4339.468047690205 4793.748172851023 3872.0014338366936 5202.437649339268 4750.618301688317 5668.347253449849 3638.4741605847616 3111.8792079887476 3475.8083513324027 1.1081786798858675 1.1008104796664098 1.2484773638416313 1.3791750546353934 1.113985882550865 1.4967561854625806 1.36676646739376 1.6307997105988215 1.046799418382778 0.8952965449881183 1.0 11.763132821876326 -8.960313822718854 24.999994386830355 1.020646517231618 1.3037007652910457 0.4394785901712046 0.1619515571056668 111.53660835160487 70261.94840822728 0.0277134953010375 0.029460413131671973 1.0956861633426309e-09 8.960313822718854 0.2830542480594278 ESS(ph)PEKEAEEGCPEKESEEGCPK ddPTM_A549_MK2206_60min_R1 2 ESSPEKEAEEGCPEKESEEGCPK 23 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.009)S(0.991)PEKEAEEGCPEKESEEGCPK;ES(0.129)S(0.871)PEKEAEEGCPEKESEEGCPK 319.96 1.3139999999999995e-196 380926000.0 20566.2 20610.1 18487.4 16103.9 25998.8 21742.4 20857.8 21998.7 26439.6 26034.8 26321.6 True False 24037.271764685353 21659.066057145323 21109.191312950385 20049.356222931543 22174.4109604021 24043.166336562947 24647.39227226369 25117.083093193236 20451.072815365285 20153.520598046114 19785.22028079646 1.2149104949827592 1.0947093714275002 1.0669171742019457 1.013350164334104 1.1207563345617428 1.2152084230216658 1.245747680463606 1.2694871594415293 1.0336540369588456 1.0186149212403324 1.0 14.272135507343942 -8.950433821383733 15.902743938963658 1.0148438006010383 1.1494795430097406 0.4019609539100447 0.07488050548672599 2.5942047203288072 831.8719391380238 0.01437749499107601 0.015287107606219414 1.1208982177183896e-09 8.950433821383733 0.13463574240870235 ESS(ph)PEKEAEEGCPEKESEEGCPK ddPTM_A549_PD325901_60min_R1 4 ESSPEKEAEEGCPEKESEEGCPK 23 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.152)S(0.848)PEKEAEEGCPEKESEEGCPK;ES(0.068)S(0.932)PEKEAEEGCPEKESEEGCPK;ES(0.02)S(0.98)PEKEAEEGCPEKESEEGCPK;ES(0.009)S(0.991)PEKEAEEGCPEKESEEGCPK 378.79 6.880299999999997e-297 1001815000.0 98436.5 107470.7 116353.6 95202.6 98208.7 83283.09999999999 100214.6 105546.1 68571.8 92977.5 109812.4 True False 108429.70101487884 116527.63305745443 124250.05498703626 101083.04838120799 91310.8597136221 82604.87004602372 104028.32144253342 103440.90023618618 65689.96571085785 87106.8847823605 96306.1709581574 1.1258852878907293 1.209970575074392 1.2901567339959947 1.0496009484701248 0.9481309328900053 0.8577318485843805 1.0801833403565706 1.0740838225322928 0.6820950833918886 0.9044787464367807 1.0 16.555340623365794 -6.620905593792452 2.298254259944331 0.8855973451837726 1.2083355857123819 0.48915160167135674 0.11547506318842343 0.20125260345321305 2.1439797340135116 0.02184701507267665 0.052612357273202084 2.393836067928724e-07 6.620905593792452 0.3227382405286092 ESS(ph)PFLSPLEASR ddPTM_A549_MK2206_60min_R1 2 ESSPFLSPLEASR 13 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 ES(0.003)S(0.996)PFLSPLEASR;ES(0.061)S(0.939)PFLSPLEASR 121.56 8.7914e-06 6749800.0 3109.6 4404.5 3810.8 3487.8 5231.4 3676.3 3137.6 3471.6 5326.6 5473.7 5070.3 True False 3634.424457579215 4628.670236859431 4351.228742570145 4342.311156573293 4461.867989993675 4065.323625869564 3707.661306247762 3963.709931329107 4120.133604832325 4237.187368350246 3811.204576838882 0.9536156835206434 1.2144901024175871 1.1416938279863145 1.1393539940002186 1.1707238223602447 1.066676832457379 0.9728318780838047 1.0400150008784668 1.0810581068963967 1.1117711691731558 1.0 11.896031335496376 -7.470766901397951 6.48722937239294 1.034294313148412 1.1301148901451694 0.2411375835594154 0.0696300842772356 0.20609860928511328 20.127531937240303 0.009621718847736806 0.01532004261102088 3.382463342345822e-08 7.470766901397951 0.0958205769967575 ESS(ph)PFLSPLEASR ddPTM_A549_PD325901_60min_R1 1 ESSPFLSPLEASR 13 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 ES(0.002)S(0.899)PFLS(0.099)PLEASR 120.9 9.8337e-06 8059300.0 1872.9 2413.7 2582.0 2654.3 3162.4 1956.1 2368.6 3061.3 2608.3 2186.0 2870.5 True False 2063.035429243893 2617.1109698808864 2757.2300468273174 2818.2500826473274 2940.283933687736 1940.170170142889 2458.7383691476525 3000.239969956611 2498.68222160758 2047.9755869349071 2517.4466975987325 0.8194951778767431 1.0395894270084125 1.0952486300732016 1.1194874891831936 1.1679627364076177 0.7706896721958487 0.9766794154938498 1.1917789452378043 0.992546227092295 0.8135129887311495 1.0 11.297745516747545 ESS(ph)PIPS(ph)PTSDR ddPTM_A549_MK2206_60min_R1 1 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.195)S(0.805)PIPS(0.831)PT(0.159)S(0.01)DR 126.17 2.5491e-06 12342000.0 715.05 673.3 629.53 957.53 1556.8 934.84 1195.9 1076.8 1469.5 1080.0 1111.2 True False 835.7329587059477 707.5680941031795 718.8068201716662 1192.1248929851552 1327.7967822804892 1033.7641483034308 1413.1795500196652 1229.4396975616962 1136.6605963092973 836.0272499074248 835.2583724401644 1.0005681909711324 0.8471248148474774 0.8605802035503206 1.4272528505190838 1.589683894339663 1.2376579300646122 1.6919070752815488 1.4719274156689401 1.3608490903103452 1.0009205265012957 1.0 9.706078728654775 -6.250978514444413 24.366638410360043 1.281102632979967 0.8971943966239276 0.4410847856180903 0.21363904623354937 470.5785679116238 1096120.8639395575 0.034765762758786484 0.09085877636210841 5.610757330640778e-07 6.250978514444413 -0.38390823635603943 ESS(ph)PIPS(ph)PTSDR ddPTM_A549_PD325901_60min_R1 2 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.007)S(0.993)PIPS(0.498)PT(0.498)S(0.004)DR;ES(0.14)S(0.86)PIPS(0.988)PT(0.012)SDR 172.92 1.0284000000000001e-15 38949000.0 2692.1000000000004 2687.6000000000004 2620.3 2958.5 2910.6 3073.1 2254.3 3099.8999999999996 2869.3 2492.8 2855.9 True False 2965.400010180726 2914.0934841330213 2798.129315143927 3141.239825758999 2706.1694970248955 3048.073692483059 2340.0886201002927 3038.0700626754947 2748.7132992595302 2335.4041825760914 2504.642405041708 1.183961432662618 1.1634768613144577 1.1171771704860727 1.2541669898408871 1.0804614229869798 1.2169696106507872 0.934300487522619 1.2129755754993312 1.0974474015638005 0.9324301855925823 1.0 11.290388925088752 -14.999999937642809 0.09207851764352065 0.5119916335677813 1.257630290206785 0.41656296094486345 0.08198239786146491 93.77057254682377 0.6282412014573022 8.849455030330212 0.6618202047144258 1.0000001435827497e-15 14.999999937642809 0.7456386566390037 ESS(ph)PIPS(ph)PTSDRK ddPTM_A549_MK2206_60min_R1 3 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.161)S(0.834)PIPS(0.928)PT(0.042)S(0.036)DRK;ES(0.401)S(0.599)PIPS(0.902)PT(0.056)S(0.042)DRK;ES(0.112)S(0.888)PIPS(0.784)PT(0.118)S(0.098)DRK 84.17299999999999 0.00025635 91332000.0 7998.900000000001 8839.0 8290.0 7740.7 11157.5 8534.3 8426.7 8013.0 12907.6 12925.0 13557.0 True False 9348.91876567094 9288.867345578508 9465.646655795763 9637.17184749323 9516.246530250883 9437.393961390146 9957.722313028431 9148.867288783316 9984.04920920169 10005.233523197647 10190.422745834516 0.9174220735339412 0.9115291462638749 0.9288767396489988 0.9457087392603574 0.9338421739314777 0.9261042644425933 0.9771647910386049 0.8977907508815618 0.9797482850535142 0.9818271305071649 1.0 13.314926281952905 -8.908635897790978 6.315417640315005 0.9911898256311389 0.931349141644157 0.6304888531693276 0.019631208204817088 0.08994870873739644 5.1065565039645735 0.00336278776095122 0.003558860506281347 1.2341390726000314e-09 8.908635897790978 -0.059840683986981835 ESS(ph)PIPS(ph)PTSDRK ddPTM_A549_PD325901_60min_R1 4 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.065)S(0.935)PIPS(0.453)PT(0.453)S(0.095)DRK;ES(0.149)S(0.851)PIPS(0.877)PT(0.057)S(0.066)DRK;ES(0.143)S(0.857)PIPS(0.897)PT(0.057)S(0.046)DRK;ES(0.081)S(0.919)PIPS(0.614)PT(0.316)S(0.07)DRK 124.42 7.0461e-06 191337000.0 20943.5 19570.1 21042.4 19370.9 23836.7 20179.0 20121.0 22562.100000000002 23601.7 21258.4 23784.799999999996 True False 23069.66870221018 21219.341008271924 22470.463802230486 20567.396498494185 22162.492424150805 20014.668914326136 20886.715665633677 22112.08121587497 22609.80262612262 19916.14099601876 20859.420384269757 1.1059592393855386 1.0172545841337752 1.0772333740958415 0.9860003835007904 1.0624692352843947 0.9595026393647709 1.0013085349861641 1.0600525234416318 1.08391327321697 0.9547792138576232 1.0 14.348411450141677 -5.252929677115009 23.406001380108716 1.0335698347731421 1.1059593313446847 0.17982373410886887 0.04509399525895686 567.707468900269 1561393.8017725646 0.005786719439980968 0.08827544326890349 5.585606320247344e-06 5.252929677115009 0.07238949657154259 ESS(ph)PIPSPTSDR ddPTM_A549_MK2206_60min_R1 1 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ES(0.104)S(0.896)PIPSPTSDR 79.82 0.00087093 5708800.0 564.97 610.43 450.88 420.54 760.45 504.46 614.66 627.46 848.95 733.68 876.97 True False 660.3231238096629 641.4982796426616 514.8215638317488 523.5723188787582 648.5888123620233 557.8416223665532 726.3357657120891 716.404376515659 656.6641804945748 567.94117843711 659.1941458592975 1.0017126637993632 0.9731553043548827 0.7809862497499114 0.7942611780877569 0.9839116691738069 0.84624784044369 1.101854089989329 1.0867881352037565 0.9961620330207503 0.8615689050101712 1.0 9.364559620133747 -7.749093008414925 24.999960916371286 1.0132643541661106 0.8942335943213743 0.28201352081918174 0.08927917776112398 197.1582364765119 399221.3427475765 0.012108049269534757 0.01788650273017371 1.7819970944569973e-08 7.749093008414925 -0.11903075984473632 ESS(ph)PIPSPTSDR ddPTM_A549_PD325901_60min_R1 1 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ES(0.049)S(0.951)PIPSPTSDR 80.979 0.00077296 6772200.0 1259.1 1562.9 1471.6 1464.9 1601.2 1423.3 1284.1 1393.2 1673.1 1518.0 1917.7 True False 1386.9229050995693 1694.611067998026 1571.4716254496816 1555.3835459707136 1488.737235840122 1411.7091166936113 1332.967128186482 1365.4115330557436 1602.7854253619769 1422.1532209364993 1681.8350573018947 0.8246485879088274 1.0075964706768734 0.9343791584239747 0.9248133693121829 0.8851862311803914 0.8393861874649965 0.792567096517129 0.8118581707092147 0.9529979877653791 0.8455961330821625 1.0 10.715820507686157 -8.948353797354866 6.473567456616355 0.9796279416259127 0.8812722370752316 0.011641402383589905 0.07183361237385477 0.17384467049169633 15.342832184470787 0.011424774557434311 0.012001901546547952 1.1262795603734283e-09 8.948353797354866 -0.0983557045506811 ESS(ph)PIPSPTSDRK ddPTM_A549_MK2206_60min_R1 2 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ES(0.034)S(0.965)PIPSPTSDRK;ES(0.14)S(0.86)PIPS(0.001)PTSDRK 90.444 7.7308e-05 28470000.0 3707.5 3550.8 2807.7 2988.7 4659.700000000001 3984.6 3198.7 3712.2 4999.9 4272.5 4999.6 True False 4333.2353603276715 3731.5205533069543 3205.874079068491 3720.931634167839 3974.2643026672636 4406.247727236588 3779.8623853565505 4238.415718135708 3867.4306331996313 3307.3392826198806 3758.061338059618 1.1530507276299622 0.9929376392865458 0.8530659269983509 0.9901199846006373 1.057530451251037 1.1724789275290661 1.0058011419548007 1.127819728542299 1.0291025838328876 0.8800652743809508 1.0 11.875772898890053 -5.253653203271061 23.832294444765854 1.0207800635486233 1.1530508521303833 0.1679229901757343 0.08851810140096561 652.3343359177131 1996600.2832467495 0.010713005891670378 0.1547905553944161 5.576308555904084e-06 5.253653203271061 0.13227078858176 ESS(ph)PIPSPTSDRK ddPTM_A549_PD325901_60min_R1 1 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ES(0.034)S(0.965)PIPSPTSDRK 81.632 0.00024801 22237000.0 4254.4 3954.5 4314.6 4073.8 5291.7 4481.0 4375.7 4788.4 4900.1 4699.2 5663.0 True False 4686.30355607625 4287.759593318958 4607.414701797499 4325.429373728921 4920.029247373955 4444.508221670812 4542.219657974915 4692.8916055728705 4694.165837556763 4402.491710029512 4966.486900714724 0.9435852041413514 0.8633385487640991 0.9277009672842285 0.8709233428374595 0.9906457714941153 0.8948998176218297 0.9145739732689615 0.9449117050721547 0.945168271133712 0.8864398110857703 1.0 12.278009990963856 -10.169003362688507 0.2493683477190244 1.034428644569624 0.8986108767782968 0.0 0.04736466111549522 2.249997293864622 0.251256299300661 0.09756949831778003 0.02692086189292462 6.77636260736532e-11 10.169003362688507 -0.13581776779132726 ESS(ph)PKKEETVAR ddPTM_A549_PD325901_60min_R1 2 ESSPKKEETVAR 12 2 Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 Q68DK7 MSL1 Male-specific lethal 1 homolog 1 ES(0.302)S(0.698)PKKEETVAR;ES(0.172)S(0.828)PKKEETVAR 121.92 3.863e-06 109314000.0 17382.9 18102.0 16393.7 17062.2 19683.0 18587.6 19010.6 17915.0 18404.300000000003 19492.9 20761.3 True False 19147.599211385364 19627.51906897453 17506.275065326477 18116.0933429323 18300.53398266372 18436.22874829914 19734.058785999485 17557.67127095439 17630.83127367726 18262.11496732087 18207.791716724107 1.0516156769191307 1.0779736156003137 0.9614716236701414 0.9949637838998576 1.0050935482667251 1.0125461140554026 1.083824941158212 0.9642943825432398 0.96831244271556 1.0029835166966936 1.0 14.15226833906801 ESS(ph)PKKEETVASK ddPTM_A549_MK2206_60min_R1 1 ESSPKKEETVASK 13 2 J3QQY0 J3QQY0 MSL1 1 ES(0.493)S(0.507)PKKEETVASK 80.738 0.00013593 43102000.0 3910.1 3938.1 3466.1 2813.1 5126.4 3620.3 3953.2 3544.0 4515.1 4700.4 5285.4 True False 4570.029287233238 4138.5324690149 3957.6450993550907 3502.309626284857 4372.313350901015 4003.3977430393543 4671.445268950364 4046.3728530448084 3492.4370591331144 3638.576375430421 3972.88931038089 1.1503037034764754 1.0416933736868017 0.996162940914068 0.8815522791268209 1.1005374198260336 1.0076791549612891 1.1758307126111454 1.0184962471700159 0.8790672949300685 0.9158514348544945 1.0 11.955972883376509 -8.566155226483373 10.382602963171328 0.9431465904281919 1.045814103361345 0.294498452032109 0.0796695302027932 0.5122310765258065 119.97765240151705 0.014341872409563887 0.016268992000840074 2.7154685266684364e-09 8.566155226483373 0.10266751293315313 ESS(ph)PKKEETVASKA ddPTM_A549_PD325901_60min_R1 1 ESSPKKEETVASKA 14 3 J3QQY0 J3QQY0 MSL1 1 ES(0.197)S(0.801)PKKEET(0.002)VASKA 65.47 0.0013746 50187000.0 12218.0 11158.0 12959.0 12878.0 12983.0 12740.0 12466.0 14094.0 12857.0 13063.0 13958.0 True False 13458.362365583793 12098.323819004405 13838.47566879752 13673.444811939975 12071.118868918513 12636.249663933546 12940.40045165695 13812.884113470893 12316.665001421867 12238.19995065447 12241.254487052114 1.099426727858574 0.9883238545364047 1.1304785537654518 1.1169970223560604 0.9861014556707763 1.0322675406592705 1.0571139147008455 1.1283879546888869 1.0061603583562058 0.9997504719470643 1.0 13.579463792932074 -8.950831385847627 24.990114131777712 1.0027177445814293 1.0644726186297262 0.2670239235073627 0.04811986762842788 108.75749056837618 55276.4189420773 0.008153389145230455 0.008678455914745175 1.1198725878532454e-09 8.950831385847627 0.06175487404829694 ESS(ph)PLPK ddPTM_A549_MK2206_60min_R1 1 ESSPLPK 7 0 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 ES(0.106)S(0.894)PLPK 89.698 0.012624 7743100.0 2289.0 3275.4 2644.7 3269.6 5454.3 4055.1 4013.4 4230.0 6029.4 5134.5 5354.4 True False 2675.327239323006 3442.103869635461 3019.758228055858 4070.6521467779235 4651.97969526752 4484.2079904424745 4742.58282970894 4829.615453831698 4663.750526973309 3974.612883934882 4024.7547060777715 0.6647180846283629 0.8552332057497936 0.750296216436676 1.011403785833418 1.1558417928532583 1.1141568413277172 1.1783532602737699 1.1999775903208483 1.1587664013239345 0.9875416451921479 1.0 11.97468514363868 -6.367904058236629 3.3127839027611397 1.1016424758954064 0.7636482614258697 0.803444034086669 0.07676722373366646 0.09227702917956837 1.8989782606254961 0.012144772572691448 0.030793301812642098 4.286432032550472e-07 6.367904058236629 -0.3379942144695367 ESS(ph)PLSSR ddPTM_A549_PD325901_60min_R1 2 ESSPLSSR 8 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 ES(0.054)S(0.946)PLSSR;ES(0.005)S(0.995)PLSSR 174.92 3.411e-06 75862000.0 4552.17 3910.45 4720.7 4616.8 4616.4 4745.3 3884.44 4694.13 4809.2 4113.2 4745.2 True False 5014.302947269568 4239.997345225467 5041.075089875178 4901.969250486447 4292.159989715429 4706.6558500992 4032.26448984713 4600.501894676256 4607.0860484435 3853.491850036894 4161.570482301167 1.2049064093940027 1.0188454967320253 1.211339591943588 1.1779133073281198 1.0313798619943237 1.1309806886886182 0.9689285588207707 1.1054725407732078 1.107054672758055 0.9259705840440507 1.0 12.022912356167136 -14.999999983032522 0.08141118778603808 0.6648257375075086 1.2100367368438594 0.368248387098697 0.07385859787611898 153.49333365065078 0.9223020321004144 9.432673727685222 0.9345997162637989 1.000000039069063e-15 14.999999983032522 0.5452109993363508 ESS(ph)PLYS(ph)PTFSDSTSAVK ddPTM_A549_MK2206_60min_R1 4 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.004)S(0.996)PLYS(0.993)PT(0.007)FSDSTSAVK;ES(0.006)S(0.994)PLYS(0.914)PT(0.085)FS(0.001)DSTSAVK;ES(0.006)S(0.994)PLYS(0.999)PT(0.001)FSDSTSAVK;ES(0.087)S(0.913)PLYS(0.989)PT(0.009)FS(0.002)DSTSAVK 227.67 4.224599999999999e-64 57152000.0 13008.199999999999 14258.2 13234.7 12090.7 20110.9 14703.1 13814.399999999998 14315.4 22422.4 18829.9 17331.8 True False 15203.666140044355 14983.88147830382 15111.57946869243 15052.922042772143 17152.613250748145 16258.97228287212 16324.297663510026 16344.65178907384 17343.762201215097 14576.212512066499 13027.83572665446 1.167013958345992 1.1501435689465567 1.1599455032868358 1.155443034331054 1.3166126446969657 1.2480179075029996 1.2530322001306118 1.2545945567638144 1.3312849935412077 1.1188514207501188 1.0 13.669309812974722 -10.950140721053739 1.2162148200207699 1.0002023205645063 1.2346268512215426 0.43446422722570066 0.06896000328183245 0.2558070550635875 0.6735432249123372 0.04968715771271301 0.011629555875495341 1.1216549543074908e-11 10.950140721053739 0.23442453065703628 ESS(ph)PLYS(ph)PTFSDSTSAVK ddPTM_A549_PD325901_60min_R1 2 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.006)S(0.994)PLYS(0.997)PT(0.003)FSDSTSAVK;ES(0.018)S(0.982)PLYS(0.997)PT(0.003)FSDSTSAVK 207.53 4.0032999999999997e-50 138897000.0 11169.2 11355.0 10917.7 10470.7 12377.9 11414.8 12493.2 12999.900000000001 13325.7 16820.5 16777.699999999997 True False 12303.08896166954 12311.925700375967 11658.640775463444 11117.45135831494 11508.519005436838 11321.841653364883 12968.63556254135 12740.606796275733 12765.66717037003 15758.450759395508 14714.149262603112 0.8361400134045517 0.8367405740315181 0.7923421577008584 0.7555619533213929 0.7821396126982635 0.7694526847121239 0.8813717552466259 0.8658745109142494 0.8675776589282491 1.0709726045423877 1.0 13.84491651101537 -9.842463985816167 0.39607661870173677 1.019835990553645 0.7938751603132337 0.8114777457245109 0.04045932490845766 0.43423950924773114 0.13730213569610897 0.03951777864596252 0.01364428054083274 1.4372622344244208e-10 9.842463985816167 -0.22596083024041125 ESS(ph)PLYSPTFSDSTSAVK ddPTM_A549_MK2206_60min_R1 3 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.101)S(0.899)PLYSPTFSDSTSAVK;ES(0.42)S(0.567)PLY(0.006)S(0.007)PTFSDSTSAVK;ES(0.001)S(0.999)PLYSPTFSDSTSAVK 263.99 3.1529999999999997e-100 602664000.0 7694.799999999999 8586.099999999999 7088.2 7573.9 13245.0 10243.7 9596.599999999999 10214.3 14310.900000000001 12628.699999999999 14055.8 True False 8993.494120202125 9023.095815801737 8093.4133444646 9429.505840005291 11296.67804554541 11327.681534782265 11340.177999597552 11662.208304981828 11069.503999811315 9775.867898986933 10565.356939654848 0.8512248257744075 0.8540265953472373 0.7660331203849511 0.892492879688108 1.0692187788891165 1.0721532267656941 1.0733360041092956 1.103815836189138 1.0477169927183678 0.9252756868341349 1.0 13.367053887605193 -6.625219027542908 4.240652507676659 1.0395211088300753 0.826853569848841 0.793815434216276 0.04992060393243542 0.06159069302454387 2.002348381231312 0.006167284481733874 0.013265076937039114 2.3701780533420796e-07 6.625219027542908 -0.21266753898123436 ESS(ph)PLYSPTFSDSTSAVK ddPTM_A549_PD325901_60min_R1 5 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESS(1)PLYSPTFSDSTSAVK;ES(0.135)S(0.865)PLYSPTFSDSTSAVK;ES(0.12)S(0.88)PLYSPTFSDSTSAVK;ES(0.013)S(0.987)PLYSPTFSDSTSAVK;ES(0.251)S(0.749)PLYSPTFSDSTSAVK 326.31 1.7084999999999992e-173 1017101000.0 25316.6 27734.199999999997 25463.0 25441.800000000003 30432.4 25425.399999999998 26715.1 27177.8 26836.8 26622.4 27546.4 True False 27886.722594904128 30071.458367183353 27191.07230145779 27013.282203479917 28294.933210080533 25218.343972164494 27731.757749563643 26635.717458428353 25708.94262348591 24941.457120592804 24158.367431016806 1.1543297648126878 1.2447636808675557 1.1255343466027141 1.1181749876358658 1.171227041350187 1.0438761660602442 1.147915223524541 1.1025462517070126 1.0641837738786242 1.0324148430895457 1.0 14.560235343369845 -2.0778918279398835 0.06311540411860786 0.8176841485862584 1.7663352306538678 0.6308115079284617 0.04107340829422392 88.10213956168779 0.40798590017191566 1.1819727732520826 7.581339024300572 0.008358111722867281 2.0778918279398835 0.9486510820676094 ESS(ph)PLYSPTFSDSTSAVKEK ddPTM_A549_MK2206_60min_R1 1 ESSPLYSPTFSDSTSAVKEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.102)S(0.898)PLYSPTFSDSTSAVKEK 183.01 3.5123999999999996e-44 9807900.0 1851.1 3197.7 3156.2 2942.6 4496.3 2369.8 2775.2 1804.9 6461.7 4904.5 4942.3 True False 2163.520424950115 3360.4492715189954 3603.7966194237138 3663.537132098334 3834.9002262125937 2620.570663054073 3279.4179172293448 2060.750102274428 4998.135267214555 3796.570043676815 3714.9905094591654 0.5823757609720203 0.9045646988767719 0.9700688629614724 0.9861497957451519 1.0322772605873722 0.705404403155684 0.8827527039111516 0.5547120771983979 1.3453965102974628 1.0219595538696347 1.0 11.859142809834118 -8.773645988037492 24.998994401222635 1.1631038944575425 0.844537790056094 0.35782686153826804 0.1726697474919978 171.82197175433092 351888.2304556606 0.0327661826169603 0.03500629835856951 1.6840462396780166e-09 8.773645988037492 -0.3185661044014485 ESS(ph)PLYSPTFSDSTSAVKEK ddPTM_A549_PD325901_60min_R1 1 ESSPLYSPTFSDSTSAVKEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.093)S(0.907)PLYSPTFSDSTSAVKEK 170.56 6.786399999999999e-35 17998000.0 2227.1 2447.3 4099.6 3749.5 2871.1 7442.5 4852.6 6084.1 4207.1 3765.5 3890.8 True False 2453.1935524956325 2653.5425598000957 4377.8235088974725 3981.098099267659 2669.443840757293 7381.890747553009 5037.268348444609 5962.747852615886 4030.290217584348 3527.7456873757483 3412.256265813325 0.7189359067411379 0.7776504321745639 1.2829703187178412 1.1667054843311273 0.7823104810450162 2.1633459425397246 1.4762280309694018 1.7474501878289146 1.1811217867670065 1.0338454713145337 1.0 11.736510284054122 -5.744491912697474 10.01220730380627 1.224237208407711 0.7471476269452508 0.22997288774208802 0.3706678785749386 0.36629176226945465 197.91968275162102 0.053106657788034126 0.19727196097718983 1.8009766713809763e-06 5.744491912697474 -0.4770895814624603 ESS(ph)TDFK ddPTM_A549_MK2206_60min_R1 1 ESSTDFK 7 0 P50443 P50443 SLC26A2 Sulfate transporter 1 ES(0.006)S(0.926)T(0.068)DFK 123.16 0.00629 13408000.0 7318.4 6405.9 4722.2 4098.9 6030.5 4928.7 4136.7 5122.4 5970.1 6214.5 5288.3 True False 8553.567002298594 6731.932948188861 5391.8789671892355 5103.130684006614 5143.421438555042 5450.251762593722 4888.284843687888 5848.515886692082 4617.881882290667 4810.640133842307 3975.069160344963 2.1518033164374684 1.6935385716923357 1.356423938727476 1.2837841250449478 1.2939199875729175 1.3711086632064384 1.2297357974178427 1.4712991524868306 1.1617110787299911 1.2102028769292736 1.0 11.95676424604492 -2.0000000000000004 0.35978577513331644 1.0986900011636482 13.36085569918994 0.7920713350484276 0.13491315364349885 16.711742905634726 0.20375427850626265 0.03705220433620677 142.40439708796038 0.00999999999999999 2.0000000000000004 12.262165698026292 up ESS(ph)TDFK ddPTM_A549_PD325901_60min_R1 1 ESSTDFK 7 0 P50443 P50443 SLC26A2 Sulfate transporter 1 ES(0.002)S(0.845)T(0.152)DFK 103.8 0.010274 21443000.0 9995.9 9785.7 10198.0 8072.8 11080.0 8844.4 8184.6 8776.6 8880.3 8827.2 8429.7 True False 11010.676409407353 10610.375281917144 10890.09760555576 8571.438521340971 10301.779023924904 8772.374138751475 8496.069431784967 8601.543827890495 8507.0918730751 8269.849085540625 7392.900340271048 1.4893581548001318 1.4352114587720972 1.4730480737356313 1.1594148611269814 1.393469213673616 1.1865943993544827 1.1492200680029014 1.1634870527113226 1.1507110175332353 1.1186203932024634 1.0 12.85192474993162 -2.0000000000003744 0.14227966295084093 0.9461337418877406 2.9817356573243448 0.7723137678194661 0.0763095917882419 17.272970639699604 0.15585782006189386 0.13746264204416814 7.233072845247754 0.00999999999999138 2.0000000000003744 2.035601915436604 ESS(ph)TSEGADQK ddPTM_A549_MK2206_60min_R1 2 ESSTSEGADQK 11 0 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 ES(0.02)S(0.96)T(0.02)SEGADQK;ES(0.008)S(0.965)T(0.026)S(0.001)EGADQK 129.34 1.0376e-07 6837300.0 4382.5 4111.8 2778.1 2588.1000000000004 1423.76 782.94 898.3199999999999 1011.37 1360.12 5861.3 5845.200000000001 True False 5122.158858162111 4321.073057082215 3172.0763539766235 3222.184616184223 1214.3267900434678 865.7901911264902 1061.533115957576 1154.734794690725 1052.0549916653292 4537.228259150358 4393.6755206868675 1.165802716665194 0.9834756883473037 0.7219641821617109 0.7333688163846237 0.2763806258168175 0.19705373941477144 0.2416048046696961 0.2628174951140234 0.23944758476403386 1.0326725853531051 1.0 12.101212613234987 -3.56853172747778 14.244009251871912 0.5952077349547339 0.8763767669826115 0.0 0.3679154435077676 0.0 0.0 0.05360395806992318 0.0 0.00027006498045591907 3.56853172747778 0.2811690320278776 ESS(ph)TSEGADQK ddPTM_A549_PD325901_60min_R1 2 ESSTSEGADQK 11 0 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 ES(0.007)S(0.941)T(0.052)SEGADQK;ES(0.019)S(0.961)T(0.019)SEGADQK 167.83 5.7146e-15 16663300.0 4470.7 4606.6 3772.8 4325.5 4489.7 3392.6 2832.7 4231.1 4297.0 4657.0 6146.2 True False 4924.562172844607 4994.814348864104 4028.844895689428 4592.676311076748 4174.358960624154 3364.971790412947 2940.4999486129173 4146.707391266261 4116.412033220016 4362.95622523141 5390.256363971899 0.913604444820109 0.9266376238149077 0.7474310354917345 0.8520330019503114 0.7744267950825643 0.6242693414183759 0.5455213537276289 0.7692968777853622 0.7636764849875842 0.8094153469940888 1.0 12.396138174752208 -10.503742551679117 0.8803568490295627 0.9960586118160542 0.7656449517631504 0.09453532546788479 0.11918365038209514 0.5066532996934908 0.7212269197090876 0.0714621650994185 0.02179629722612303 3.13514367628567e-11 10.503742551679117 -0.23041366005290376 ESSAMAS(ph)PLPR ddPTM_A549_MK2206_60min_R1 5 ESSAMASPLPR 11 0 Q9C0C2;E9PKK0;E9PKE7 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 ES(0.002)S(0.007)AMAS(0.991)PLPR;ES(0.028)S(0.297)AMAS(0.675)PLPR;ES(0.003)S(0.015)AMAS(0.982)PLPR;ES(0.001)S(0.003)AMAS(0.996)PLPR;ES(0.002)S(0.001)AMAS(0.997)PLPR 67.252 0.0028246 16736800.0 6259.91 6167.860000000001 5903.2699999999995 5169.0 7555.5199999999995 5849.12 5648.780000000001 5658.84 8789.2 8094.9 8382.029999999999 True False 7316.429767894485 6481.7777289399055 6740.442452805731 6435.4052320452265 6444.113016736824 6468.069996068378 6675.090207007341 6460.99789947068 6798.4602334683095 6266.256467847789 6300.540618740668 1.161238409626644 1.0287653268451529 1.069819696544229 1.0214052446393902 1.022787314086843 1.0265896829280652 1.0594472142838969 1.0254672242335425 1.0790280778837618 0.9945585382322746 1.0 12.621259909229156 -12.190403402800976 0.006308036110940595 1.0869809383333304e-06 2.036505719680566 0.2830577353300958 0.0379477796170574 18440.491682475305 16.031945681301742 2725.1771733816972 2456.338011652224 6.450547791067961e-13 12.190403402800976 2.0365046326996277 ESSAMAS(ph)PLPR ddPTM_A549_PD325901_60min_R1 4 ESSAMASPLPR 11 0 Q9C0C2;E9PKK0;E9PKE7 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 ES(0.007)S(0.032)AMAS(0.961)PLPR;ES(0.002)S(0.003)AMAS(0.995)PLPR;ES(0.009)S(0.05)AMAS(0.941)PLPR;ES(0.003)S(0.009)AMAS(0.988)PLPR 57.885 0.0044047 10294700.0 2409.1000000000004 2561.1 2341.8999999999996 1998.8799999999999 2470.5 2733.9 2212.7 3148.1 2624.8999999999996 2590.5 3080.7 True False 2653.670058514317 2776.9328851812315 2500.835416988728 2122.3462778141443 2296.9806027623176 2711.636024821655 2296.905509335899 3085.3086758633276 2514.584581335636 2426.9353879025043 2701.7934301663167 0.9821883601038155 1.0278109548183665 0.9256205115706354 0.7855324001152438 0.8501688460397656 1.003642985635187 0.8501410521212593 1.141948396726023 0.9307094144428515 0.8982682986808164 1.0 11.399701660041062 ESSANNSVS(ph)PSESLR ddPTM_A549_MK2206_60min_R1 2 ESSANNSVSPSESLR 15 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ESSANNS(0.004)VS(0.955)PS(0.04)ES(0.001)LR;ESSANNS(0.059)VS(0.891)PS(0.049)ES(0.001)LR 180.7 6.149399999999999e-29 84893000.0 2081.11 2131.5299999999997 2117.2 1683.07 2659.35 2280.8999999999996 2322.4 2280.3 3891.7 3334.3999999999996 3205.1 True False 2432.350489745523 2240.015772499259 2417.4507960978035 2095.4222255558834 2268.163137819643 2522.2633240611176 2744.350018367479 2603.5395081258685 3010.2361637678764 2581.1567241586254 2409.185213740076 1.0096153985477458 0.9297814712310166 1.00343086214816 0.86976385775791 0.9414648259020704 1.0469362461948273 1.1391195673607366 1.0806722095409478 1.2494830810847932 1.0713816062948422 1.0 11.23432959425045 -7.464204429079047 3.125222687212678 1.1186982368148621 0.9483668436874095 0.5557288686736737 0.06671841546215816 0.193870207397641 3.7481019148745376 0.014409247336020429 0.023316068714121868 3.4339626795578913e-08 7.464204429079047 -0.1703313931274526 ESSANNSVS(ph)PSESLR ddPTM_A549_PD325901_60min_R1 2 ESSANNSVSPSESLR 15 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 ESSANNS(0.003)VS(0.915)PS(0.082)ESLR;ESSANNS(0.005)VS(0.906)PS(0.089)ESLR 162.29 8.622900000000001e-20 109880000.0 3473.9 3501.6 3337.1 4108.9 4355.5 3817.3999999999996 4045.2 4081.6 4440.7 4545.7 4692.6 True False 3826.5677706499846 3796.6921208662707 3563.575673612487 4362.697421011036 4049.5847056592897 3786.3123600549343 4199.1422996183765 4000.1892860467415 4254.072821950227 4258.683726225985 4115.439948842298 0.9298077042106823 0.9225482981313594 0.8659039417195107 1.0600804471070688 0.983998006531104 0.9200261471729287 1.0203386155105056 0.9719955425839765 1.0336860396048124 1.0348064311870186 1.0 12.006830950566782 -6.1929799703412085 0.5032556550545503 1.013486426883427 0.8839960463479682 0.3518863340515265 0.04651217225304856 1.5886931217602864 0.4623722306383617 0.009612386486875873 0.102202663800914 6.412391498487809e-07 6.1929799703412085 -0.1294903805354587 ESSEEEYDS(ph)GVEEEGWPR ddPTM_A549_MK2206_60min_R1 2 ESSEEEYDSGVEEEGWPR 18 0 O76031 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial 1 ES(0.002)S(0.002)EEEY(0.391)DS(0.606)GVEEEGWPR;ESSEEEY(0.015)DS(0.985)GVEEEGWPR 68.44 0.0016094000000000002 1755490.0 802.4300000000001 663.0 447.0 524.63 983.5899999999999 826.43 765.88 644.14 811.63 678.78 1224.74 True False 937.8605664700569 696.743868098037 510.391321488626 653.1643735515354 838.905213953794 913.8822740601637 905.0304822887041 735.448817596017 627.7971009067815 525.4431265668159 920.6032568955792 1.0187456534019574 0.7568340247324002 0.5544096413581534 0.7094960490951441 0.9112559701154176 0.9926993709993166 0.9830841630308924 0.7988770538093332 0.6819409948904736 0.5707595781690951 1.0 9.846435736289152 -6.759073489781139 24.991881423271394 0.8674490043627889 0.7449785475543164 0.05413556866744662 0.1619069395803521 111.84974859924503 1181489.002528242 0.023347093836463686 0.04684224313213049 1.7415121559094023e-07 6.759073489781139 -0.12247045680847257 ESSEEEYDS(ph)GVEEEGWPR ddPTM_A549_PD325901_60min_R1 1 ESSEEEYDSGVEEEGWPR 18 0 O76031 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial 1 ES(0.061)S(0.061)EEEY(0.164)DS(0.714)GVEEEGWPR 68.48100000000001 0.0016010000000000002 1321800.0 703.12 492.75 345.82 372.77 513.43 360.92 699.73 408.22 405.64 577.56 639.64 True False 774.5002247904137 534.2757718062754 369.2894247845945 395.7951562779052 477.3684480373431 357.9807871826446 726.3586080569478 400.0777318576054 388.59236145109804 541.0927630329937 560.9683350120371 1.3806487397792153 0.9524169876626122 0.6583070767740756 0.7055570369571972 0.8509721819273451 0.6381479396247262 1.2948299622675883 0.7131912924265514 0.6927171057574217 0.964569173091353 1.0 9.131775527078647 -5.301585358008419 3.5630940179893664 0.8368894264153313 1.4225252420887842 0.4151651773183934 0.18570909553069165 0.18599514656431393 4.130946545346188 0.02561564358717758 0.2706585398670701 4.993610241106151e-06 5.301585358008419 0.5856358156734529 ESSET(ph)PDQFMTADETR ddPTM_A549_MK2206_60min_R1 2 ESSETPDQFMTADETR 16 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 ES(0.075)S(0.075)ET(0.818)PDQFMT(0.03)ADET(0.002)R;ES(0.001)S(0.012)ET(0.974)PDQFMT(0.013)ADETR 64.675 0.0031976 4111100.0 692.5699999999999 889.85 658.75 516.5 1176.26 1033.0700000000002 687.99 1173.17 1223.65 1074.63 1275.3899999999999 True False 809.4588842891799 935.1395641433456 752.1706555495132 643.0425231865662 1003.2337121822002 1142.388781703634 812.9888775131941 1339.470440182444 946.4952287675204 831.8703366370512 958.6754640266935 0.8443513103894784 0.9754495647729516 0.784593622945345 0.6707614279451938 1.0464789700242771 1.19163243930881 0.8480334670279588 1.3972094733251124 0.9872947251533769 0.8677288277963986 1.0 9.90489869878224 -6.79130049839628 24.988352047590038 1.031889338357679 0.827536454214351 0.32699380728020144 0.15711326341127452 186.37761381393315 155963.85512334196 0.020941265517919326 0.03957901957020691 1.61696083788723e-07 6.79130049839628 -0.20435288414332808 ESSET(ph)PDQFMTADETR ddPTM_A549_PD325901_60min_R1 3 ESSETPDQFMTADETR 16 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 ES(0.001)S(0.004)ET(0.994)PDQFMT(0.001)ADETR;ES(0.005)S(0.022)ET(0.861)PDQFMT(0.112)ADETR;ES(0.001)S(0.01)ET(0.989)PDQFMTADETR 123.76 2.3971e-08 11551100.0 3008.0 3346.82 2849.77 2412.52 2947.6299999999997 2738.91 2933.61 2799.05 3183.77 3010.13 2879.73 True False 3313.369945627438 3628.8682670658136 3043.172529259133 2561.5358811695455 2740.598637571458 2716.6052250427174 3045.2501338829875 2743.220751937755 3049.9672187584133 2820.0698780880016 2525.541466112522 1.3119443850302697 1.4368674265529302 1.204958449541271 1.014252157622432 1.0851528966538673 1.075652592322823 1.2057810868456795 1.0861911351470697 1.2076488387470912 1.1166199074247778 1.0 11.3023770138055 -5.949070167751211 4.642387566485518 1.0999259620819768 1.3706241461331767 0.7124069101875845 0.06725338356693979 0.09566236960704023 4.4217128051147965 0.01165959099014264 0.03784537491526901 1.1244232893475273e-06 5.949070167751211 0.27069818405119994 ESSETPDQFMT(ph)ADETR ddPTM_A549_MK2206_60min_R1 2 ESSETPDQFMTADETR 16 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 ES(0.001)S(0.005)ET(0.037)PDQFMT(0.956)ADETR;ES(0.002)S(0.01)ET(0.063)PDQFMT(0.921)ADET(0.004)R 68.069 0.00097681 5876700.0 1454.8600000000001 1292.6799999999998 954.37 1325.6399999999999 1689.3899999999999 1173.28 918.64 1072.69 1801.4099999999999 1687.5900000000001 1800.1399999999999 True False 1700.4048000880168 1358.4718905173 1089.7140167541386 1650.4218595102404 1440.8829689214008 1297.4357108397676 1085.5449969312358 1224.7470924753484 1393.3935112606543 1306.3622469178433 1353.1155566634607 1.2566589687882304 1.0039585191578515 0.8053369953421992 1.2197198172637107 1.0648632053823686 0.9588506350773252 0.8022559430238126 0.905131188865609 1.0297668254561434 0.9654476592812941 1.0 10.402069336028593 -7.250934629919976 22.954639961632825 0.9842063186473359 1.060034893432864 0.15976607903815787 0.12608727515004753 535.8105586271175 1170830.9394212926 0.018900453825598382 0.03246899075444704 5.61132431426167e-08 7.250934629919976 0.07582857478552818 ESSFEESNIEDPLIVTPDCQEKT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 ESSFEESNIEDPLIVTPDCQEKTSPK 26 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ESSFEESNIEDPLIVT(0.037)PDCQEKT(0.533)S(0.431)PK 82.62 9.820100000000001e-07 10984000.0 824.01 966.52 881.45 487.54 1329.6 855.46 927.26 973.08 966.31 1266.2 1007.4 True False 963.0827428897119 1015.7117396592979 1006.4528642643163 606.9873218865023 1134.017601310469 945.9842093916101 1095.731139352148 1111.0170699325179 747.4423278799844 980.1645405859084 757.2347771744257 1.2718416690836558 1.3413432270627648 1.3291160081419295 0.8015840531670211 1.49757728447442 1.2492614416383399 1.4470163975310275 1.4672029117286565 0.9870681463799361 1.294399795322834 1.0 9.56459686033157 -8.782716700437144 24.893153461840075 0.9938932284710855 1.296024238011694 0.12719889754571756 0.19851815847600882 166.66729539386978 194989.59795318256 0.02984259417186021 0.031784704032906765 1.6492378737841197e-09 8.782716700437144 0.30213100954060845 ESSFEESNIEDPLIVTPDCQEKT(ph)SPK ddPTM_A549_PD325901_60min_R1 1 ESSFEESNIEDPLIVTPDCQEKTSPK 26 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ESSFEESNIEDPLIVT(0.005)PDCQEKT(0.498)S(0.498)PK 108.1 1.1415e-12 21806000.0 1610.8 1758.6 1711.2 1786.8 1969.9 1494.7 1573.0 2186.1 1764.2 1580.2 1709.5 True False 1774.3272301917145 1906.8033938072363 1827.3323222815272 1897.1665778827708 1831.5410197860713 1482.5276587662047 1632.8613757786286 2142.496520537726 1690.056809170761 1480.4259023213801 1499.2423374133543 1.1834826071233853 1.2718446819591873 1.2188371930812913 1.2654168912785346 1.2216444093661551 0.9888512495745101 1.089124376380544 1.4290528402727605 1.1272739349707928 0.9874493705104151 1.0 10.55001788390967 -10.545701478429102 0.299462896364923 0.9105079331073344 1.22811658138755 0.34137065200475214 0.10792570491597266 3.0901307140144207 0.38840774495934477 0.33997734402720964 0.060095810898008674 2.8464169805599658e-11 10.545701478429102 0.31760864828021573 ESSFEESNIEDPLIVTPDCQEKTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 ESSFEESNIEDPLIVTPDCQEKTSPK 26 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ESSFEESNIEDPLIVT(0.002)PDCQEKT(0.182)S(0.816)PK 132.12 2.1071000000000002e-24 11565000.0 628.44 1088.5 1075.4 550.63 1409.5 966.41 1076.6 1177.1 1320.0 995.68 1607.2 True False 734.5053081171468 1143.9000006405934 1227.9078906686093 685.5343747187202 1202.1644171533592 1068.6748647489605 1272.2042842638778 1343.9575297175638 1021.0221076068547 770.7551964702077 1208.0878835365663 0.6079899634180173 0.946868200756994 1.016406097107788 0.5674540603055146 0.9950968249380444 0.8846002673419031 1.0530726295669952 1.1124666905715928 0.845155490358786 0.6379959661658824 1.0 10.238509693406675 ESSFEESNIEDPLIVTPDCQEKTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ESSFEESNIEDPLIVTPDCQEKTSPK 26 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ESSFEESNIEDPLIVT(0.003)PDCQEKT(0.174)S(0.824)PK 181.64 1.3292999999999998e-57 24703000.0 1584.4 2034.1 2474.8 1778.5 1751.2 1670.4 1768.9 2090.1 1911.2 1574.4 1746.6 True False 1745.2471216263668 2205.520745674571 2642.754810181351 1888.3539057334385 1628.2017533120309 1656.796816219354 1836.2164574792203 2048.41131584827 1830.8789103770296 1474.9921153112157 1531.7792726096309 1.1393594056492613 1.4398424009988815 1.7252843522807275 1.232784605131995 1.0629480254933394 1.0816158997873995 1.1987474241970464 1.33727577626669 1.195262883573189 0.9629273235943001 1.0 10.580992706432834 -9.892630282754812 0.04113481275214276 1.418153493948975e-07 2.249792231316482 0.3273100042808894 0.1719088777132145 107.87602788819797 1.5852695210445806 48.36733422526229 38.06339864610843 1.2804709121214409e-10 9.892630282754812 2.249792089501133 ESSIIAPAPAEDVDT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 ESSIIAPAPAEDVDTPPR 18 0 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR 307.57 3.491099999999999e-152 82535000.0 10086.3 9918.4 8542.1 8692.9 12977.099999999999 10872.6 9758.3 10275.3 13869.8 13152.4 13024.900000000001 True False 11788.62085364073 10423.204195088334 9753.49822659506 10822.660890239109 11068.185780660415 12023.131315352228 11531.256796518855 11731.855241786487 10728.312445519356 10181.263705261492 9790.45786104742 1.2040929056590148 1.0646288807961042 0.9962249329932353 1.1054294951105852 1.1305074734754335 1.2280458673120676 1.177805671622103 1.1982948507917248 1.095792719582943 1.039917014072339 1.0 13.257160615217977 -9.865543869011962 0.9979165365594072 1.0138138951973394 1.1318835892901877 0.30782578991047604 0.06529493710121234 0.4103800766202464 0.8356912891620057 0.023918530207013875 0.013848073250328425 1.3628753323102647e-10 9.865543869011962 0.11806969409284829 ESSIIAPAPAEDVDT(ph)PPRK ddPTM_A549_MK2206_60min_R1 2 ESSIIAPAPAEDVDTPPRK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 ESSIIAPAPAEDVDT(1)PPRK;ESSIIAPAPAEDVDT(1)PPRK 92.147 2.6294e-06 25002000.0 6680.4 8145.799999999999 7468.0 6730.1 9917.1 8124.6 7236.3 7507.5 10985.8 9725.5 11344.8 True False 7807.888199901013 8560.386426475092 8527.074695474403 8378.974802125673 8458.307727102934 8984.339779326998 8551.042041815615 8571.71111575449 8497.533840717719 7528.502795346903 8527.573059448509 0.9156049611618292 1.0038479139138217 0.999941558521911 0.9825743788664244 0.9918774859080417 1.053563507072202 1.0027521291466512 1.0051759223870942 0.9964774011877264 0.8828423682638943 1.0 13.05791949475319 -5.260451690799679 24.747213529063643 1.0014324521273366 0.9156049310936712 0.2024064900057405 0.03963308547289874 30.74200791759413 770130.0438777162 0.002286795602540335 0.01907039798977666 5.48969617419645e-06 5.260451690799679 -0.08582752103366531 ESSIIAPAPAEDVDT(ph)PPRK ddPTM_A549_PD325901_60min_R1 2 ESSIIAPAPAEDVDTPPRK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 ESSIIAPAPAEDVDT(1)PPRK;ESSIIAPAPAEDVDT(1)PPRK 185.5 1.1175999999999997e-43 38467000.0 10354.7 11049.900000000001 10605.3 10134.6 12416.2 10000.7 9902.900000000001 11152.5 10695.7 10933.2 13694.5 True False 11405.901521272754 11981.113852627426 11325.03943284963 10760.59122465342 11544.128945564662 9919.257614921522 10279.76027857481 10930.054638533 10246.196924298658 10242.875886128415 12010.163316587992 0.9496874622445263 0.9975812598717585 0.9429546571783837 0.8959571107406418 0.9611966666281997 0.825905306485001 0.8559217728852018 0.9100671115301833 0.8531271935450695 0.8528506745600483 1.0 13.551968148780308 -5.994015128432404 5.9895826281283995 0.9153826786556939 0.9733641137011209 0.19898535688256658 0.052349591768439695 0.25172198799773343 36.051961302076315 0.008880239903497261 0.026817620852273596 1.013876067252692e-06 5.994015128432404 0.057981435045426966 ESSIIAPAPAEDVDT(ph)PPRKK ddPTM_A549_MK2206_60min_R1 2 ESSIIAPAPAEDVDTPPRKK 20 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 ESSIIAPAPAEDVDT(1)PPRKK;ESSIIAPAPAEDVDT(1)PPRKK 133.1 2.3333e-17 65695000.0 3245.3999999999996 3648.0 3892.6 3535.3 4442.1 3498.3999999999996 3300.5 3254.02 5208.4 5291.3 5402.5 True False 3793.1441775879766 3833.667618132184 4444.629212587526 4401.44865870565 3788.6729744142885 3868.5983659500257 3900.1581276360107 3715.287300018305 4028.705716105714 4095.991655032553 4060.910148585304 0.9340625718865982 0.9440414778612415 1.0944909022761555 1.08385768156899 0.9329615371406692 0.9526431820457112 0.9604147801681122 0.9148902989918644 0.9920696515556227 1.008638828529479 1.0 11.987587391307615 -5.555456450445508 24.999938148623233 0.9928762697602764 0.9365566851294028 0.1346375832314194 0.05330296285404862 246.5307167495048 189185.68934984083 0.007447703783475582 0.028845252642945404 2.78319444901121e-06 5.555456450445508 -0.05631958463087361 ESSIIAPAPAEDVDT(ph)PPRKK ddPTM_A549_PD325901_60min_R1 2 ESSIIAPAPAEDVDTPPRKK 20 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 ESSIIAPAPAEDVDT(1)PPRKK;ESSIIAPAPAEDVDT(1)PPRKK 99.93 4.1660000000000004e-08 98366000.0 2910.0 3160.6000000000004 2669.8 2756.7 3447.1 3575.7 3079.8 3392.8 3475.0 2958.8999999999996 3987.8 True False 3205.421057771225 3426.9548541266663 2850.9886828116064 2926.975098080053 3204.9875878494186 3546.580684719556 3197.0034743312267 3325.1279423998913 3328.9578346380176 2772.074549030966 3497.325880746985 0.9165348517898444 0.9798786189735088 0.8151910288104667 0.836918033344633 0.9164109085438938 1.0140835614558317 0.914127989024685 0.9507629702753595 0.9518580618878426 0.7926268936765153 1.0 11.772036517252705 -7.033516690872194 8.485518746296938 0.9713608978538589 0.8871115530883599 0.0 0.07124609360017967 0.2457623982499718 58.484032912182215 0.007178829883843902 0.01260802754981281 9.25727806723983e-08 7.033516690872194 -0.08424934476549906 ESSKELESPLT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 ESSKELESPLTPGK 14 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 ESSKELES(0.004)PLT(0.996)PGK;ESSKELES(0.012)PLT(0.988)PGK 123.55 4.830399999999999e-07 65505000.0 19552.3 20846.1 22213.0 21380.0 24640.0 21504.0 21170.0 22574.0 24476.0 23789.0 24390.0 True False 21537.23510235748 22602.874006394315 23720.507757620147 22700.594042497018 22909.371403385347 21328.87855362847 21975.635934668506 22123.743861039577 23447.358837582757 22286.95848014387 21390.184620948647 1.0068746709771181 1.0566937315846265 1.108943572856743 1.0612621837898963 1.0710226119763768 0.9971339159335663 1.0273700916609432 1.0342941986284921 1.0961737475897895 1.0419245497449778 1.0 14.384661314159821 ESSLDGLGGTGKDNLTSAT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 ESSLDGLGGTGKDNLTSATLPR 22 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 ESSLDGLGGTGKDNLT(0.001)S(0.035)AT(0.963)LPR;ESSLDGLGGTGKDNLT(0.022)S(0.227)AT(0.751)LPR 94.721 3.9696e-07 8459700.0 3042.3 3703.3 3325.3999999999996 3640.9 5746.1 4079.6000000000004 4059.3 3113.8 6790.700000000001 6504.9 6094.4 True False 3555.7658629062375 3891.78215192679 3796.9917236650467 4532.92066344621 4900.856301812643 4511.300564180689 4796.8222655697155 3555.190685612564 5252.617292519595 5035.4385721507415 4580.992283116755 0.7761999241978667 0.8495500344477661 0.8288579174557569 0.9895062866951964 1.0698241775858797 0.9847867635156439 1.047114242747887 0.7760743668386471 1.1466112509899031 1.0992025877687783 1.0 12.161444417236723 -6.320544042556336 2.879883714179629 1.0400529444365278 0.8155841577190794 0.4651095434543999 0.0919676671637112 0.17520903041169109 2.848223586540597 0.014107934374693806 0.03819131446557647 4.780308857500444e-07 6.320544042556336 -0.2244687867174484 ESSLDGLGGTGKDNLTSAT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 ESSLDGLGGTGKDNLTSATLPR 22 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 ESSLDGLGGTGKDNLTS(0.005)AT(0.995)LPR;ESSLDGLGGTGKDNLT(0.007)S(0.034)AT(0.959)LPR 144.7 2.8593000000000006e-27 16042700.0 4547.5 5579.700000000001 6403.299999999999 5896.1 5337.4 6529.299999999999 6188.3 6688.9 6421.9 7087.299999999999 6982.5 True False 5009.158852307439 6049.920900958853 6837.866444170937 6260.288705985344 4962.519437030396 6476.1275455825125 6423.799142867691 6555.48464215946 6152.009875758817 6639.806668473816 6123.696765714387 0.8179959008344322 0.9879523974523701 1.116623945596894 1.02230547094293 0.8103796818965238 1.0575519646631313 1.0490067337810602 1.070510982657173 1.004623532341273 1.084280773935288 1.0 12.580187129643587 ESSPFLS(ph)PLEASR ddPTM_A549_PD325901_60min_R1 1 ESSPFLSPLEASR 13 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 ESSPFLS(1)PLEASR 153.39 2.1214e-34 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ESSPIPS(ph)PTSDRK ddPTM_A549_MK2206_60min_R1 3 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ESSPIPS(0.97)PT(0.013)S(0.018)DRK;ESS(0.001)PIPS(0.915)PT(0.042)S(0.042)DRK;ESSPIPS(0.755)PT(0.074)S(0.17)DRK 88.552 0.00015323 33122000.0 4703.8 4728.799999999999 4297.9 3982.9 5987.299999999999 5160.6 4994.700000000001 4384.3 6699.5 6791.200000000001 7572.9 True False 5497.686443131302 4969.475721662134 4907.406847037953 4958.7106787991725 5106.57610132835 5706.69126667096 5902.172337556001 5005.787951355632 5182.073946903121 5257.0632033067595 5692.339928592621 0.9658043110736283 0.8730110611807387 0.8621071314430909 0.871119915711915 0.8970961266171088 1.0025211667360645 1.0368622414675892 0.8793902005415315 0.910359186540067 0.9235329002227245 1.0 12.474806102298016 -7.1345806531221205 7.070861277678286 0.9595053138429559 0.8888145508499383 0.29888085575636436 0.04937615425975644 0.26415546238736043 14.131177695877989 0.007998994493083571 0.01391430223242036 7.335324769556997e-08 7.1345806531221205 -0.07069076299301758 ESSPIPS(ph)PTSDRK ddPTM_A549_PD325901_60min_R1 2 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ESSPIPS(0.995)PT(0.003)S(0.003)DRK;ESSPIPS(0.805)PT(0.171)S(0.024)DRK 96.414 6.9639e-05 80658000.0 10517.6 10290.6 10900.7 11683.7 12101.8 12110.900000000001 9921.4 11203.900000000001 12740.0 13381.400000000001 14056.4 True False 11585.339009352112 11157.824976863836 11640.487053234128 12405.37561339206 11251.81131694354 12012.272845756092 10298.964306198402 10980.429425210483 12204.582104543417 12536.496120315995 12327.551910861112 0.939792352376543 0.9051127959180042 0.9442659124378419 1.006312989236929 0.9127368838763683 0.9744248438469567 0.8354427854507402 0.890722627218162 0.9900247991485355 1.0169493676413395 1.0 13.589598707536258 -8.845839102064593 7.920584975166414 0.995526773822677 0.9268864446332826 0.38696831880618887 0.04250819726883237 0.19990418677502514 16.439540666410352 0.007413030458093076 0.007879332943983009 1.4261358522453654e-09 8.845839102064593 -0.06864032918939433 ESSPLY(ph)SPTFSDSTSAVK ddPTM_A549_MK2206_60min_R1 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.001)S(0.005)PLY(0.962)S(0.032)PTFSDSTSAVK 141.38 1.3462e-16 151480000.0 1885.1 2458.3 2480.4 1901.9 3198.2 2524.3 2635.6 2368.9 4476.7 3481.2 3090.9 True False 2203.2587937299236 2583.41696975174 2832.158017495275 2367.865585379535 2727.7490166299226 2791.4197505052725 3114.454404241013 2704.6988294519897 3462.734597820911 2694.794502201599 2323.344225499735 0.948313542844052 1.1119389634121328 1.219000605425181 1.0191626188625682 1.1740615044002802 1.2014662828986773 1.340504936831354 1.1641403799603687 1.490409625838419 1.1598774183459482 1.0 11.181987203608927 -7.069303474280831 2.7699793303013256 1.2387939376480417 1.0875626660438182 0.21978518235411282 0.130279369449743 0.4633657270525323 6.997223384140838 0.027508780970469132 0.052024068992556 8.525041969127806e-08 7.069303474280831 -0.15123127160422345 ESSPLYS(ph)PTFSDSTSAVK ddPTM_A549_MK2206_60min_R1 2 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.002)S(0.005)PLYS(0.901)PT(0.092)FSDSTSAVK;ESS(0.017)PLYS(0.982)PT(0.002)FSDSTSAVK 308.0 3.1136999999999997e-152 134975400.0 6090.4 7019.599999999999 5950.0 6106.9 8399.9 7204.6 5571.8 5166.3 8823.5 7907.7 9384.2 True False 7118.3106240160905 7376.867656864224 6793.799469479471 7603.090774149159 7164.285837280245 7966.985989973576 6584.123937452601 5898.6388461301885 6824.991338234149 6121.345077863834 7053.844149255757 1.009139197492354 1.0457939672005014 0.9631343315398139 1.0778648653516611 1.0156569504071253 1.129453078547839 0.9334093294572272 0.8362303903117206 0.9675562989230839 0.8678027113073785 1.0 12.784193985237744 -7.8023076408047665 24.999824343983416 0.9672991580706084 1.037526602052138 0.3768279283980658 0.0648501001438035 164.8610514903778 100847.7494371533 0.009472799801969158 0.013088634622075416 1.576494134293926e-08 7.8023076408047665 0.07022744398152969 ESSPLYS(ph)PTFSDSTSAVK ddPTM_A549_PD325901_60min_R1 4 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESS(0.096)PLYS(0.902)PT(0.002)FSDSTSAVK;ESS(0.001)PLYS(0.966)PT(0.033)FSDSTSAVK;ESS(0.004)PLYS(0.996)PTFSDSTSAVK;ES(0.006)S(0.005)PLY(0.053)S(0.839)PT(0.019)FS(0.019)DS(0.019)T(0.019)S(0.019)AVK 326.53 1.5570999999999994e-173 221015500.0 9761.7 11874.4 10355.2 11890.2 13207.699999999999 13896.3 12243.0 13953.2 18907.5 19150.7 20834.5 True False 10752.700597816283 12875.097361210415 11057.966142876157 12624.63064939654 12280.03671609143 13783.133140103575 12708.914064626664 13674.892479926362 18112.883527602404 17941.521533721083 18271.988580777153 0.5884800414733482 0.7046358038312 0.6051867914644807 0.6909281162028607 0.6720689793452754 0.7543313131556995 0.6955408278876082 0.7484074554596035 0.9912924062714151 0.9819140075753038 1.0 14.157346033739522 -8.682080696909422 3.012409637381903 0.9978477211630794 0.6766573342805909 0.9093485431058471 0.04383245728808539 0.0457537702277517 0.8284110841146249 0.0075326363022365315 0.00840729072606721 2.0793102914407854e-09 8.682080696909422 -0.32119038688248847 ESSPLYS(ph)PTFSDSTSAVKEK ddPTM_A549_PD325901_60min_R1 1 ESSPLYSPTFSDSTSAVKEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.001)S(0.001)PLY(0.004)S(0.822)PT(0.159)FS(0.012)DS(0.001)TSAVKEK 63.115 0.00056745 4437200.0 1704.8 2263.0 2618.7 3103.5 2314.8 3020.9 3261.9 3576.5 3647.2 3421.8 3701.5 True False 1877.8700409925723 2453.710951999191 2796.4207295223464 3295.1961464401084 2152.216433626478 2996.298791976203 3386.0333894801674 3505.1639017900275 3493.9208674796487 3205.7469640319596 3246.238965741756 0.5784756023232209 0.7558627007727157 0.8614340345962093 1.0150812004954064 0.6629876778448142 0.9230062307786875 1.0430635037080422 1.079761514411219 1.0762981112455774 0.9875264876870997 1.0 11.66455348972389 -7.542344170395587 4.0354795116448665 1.0407092121770956 0.7909683309238748 0.5749589442802957 0.10703243996186083 0.12425590966074974 4.596275487439877 0.01634795020866676 0.025262964926393208 2.8685064423976455e-08 7.542344170395587 -0.2497408812532208 ESSPLYSPTFSDS(ph)TSAVKEK ddPTM_A549_PD325901_60min_R1 1 ESSPLYSPTFSDSTSAVKEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESSPLYSPT(0.002)FS(0.012)DS(0.353)T(0.353)S(0.28)AVKEK 73.546 0.00011689 8634300.0 2462.7 2387.1 2336.3 2226.1 3019.1 3073.5 3268.6 3136.0 3743.8 2448.2 3881.8 True False 2712.7114910560817 2588.269294528178 2494.8553673131933 2363.6011411600844 2807.048831329576 3048.470435015676 3392.9883616465513 3073.4500198555907 3586.4611054151956 2293.620234187574 3404.3632087576225 0.7968337467863924 0.7602800100382746 0.7328405385463139 0.694285831511688 0.8245444622678705 0.895459810860832 0.9966587445541035 0.9027973313626562 1.0534895619213402 0.673729591568639 1.0 11.733169249864545 -7.470164296987879 1.214853562365372 1.0185046233426451 0.7440222906237753 0.1785601473080446 0.11293899955804322 0.10771545536876863 0.3166509321209519 0.0077555335917206345 0.01461942677279936 3.3871599299769237e-08 7.470164296987879 -0.2744823327188698 ESSPLYSPTFSDSTS(ph)AVKEK ddPTM_A549_PD325901_60min_R1 1 ESSPLYSPTFSDSTSAVKEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESSPLYS(0.002)PT(0.008)FS(0.007)DS(0.193)T(0.193)S(0.597)AVKEK 48.867 0.0044416 6054100.0 3600.3 2961.6 3317.1 3804.5 4627.1 4079.6 3922.2 3891.3 3727.3 3910.2 4231.7 True False 3965.7998055992252 3211.1844257361045 3542.218353342715 4039.4953243535983 4302.108458628426 4046.37709018707 4071.461467310191 3813.684968834206 3570.654543034902 3663.309304681091 3711.227726956473 1.0685951112063725 0.865262027013781 0.9544599830438429 1.0884525611330063 1.1592143557723757 1.0903068709031898 1.097065921807267 1.0276073713109912 0.9621221885952945 0.9870882560163778 1.0 11.857680814522825 -4.011582381935602 12.547121489029214 1.0096097219132179 1.032555476873574 0.0 0.08162771798590496 0.0 0.0 0.011502715004924747 0.0 9.73683068488764e-05 4.011582381935602 0.022945754960356224 ESSPT(ph)SPVAETEGTIMEESSR ddPTM_A549_PD325901_60min_R1 1 ESSPTSPVAETEGTIMEESSR 21 0 Q8IWV8-4;Q8IWV8 Q8IWV8-4 UBR2 E3 ubiquitin-protein ligase UBR2 1 ES(0.006)S(0.055)PT(0.512)S(0.426)PVAET(0.001)EGTIMEESSR 76.262 0.00026721 2015600.0 1396.7 1308.0 1230.7 1108.3 1672.9 1281.1 1550.9 1619.0 1329.6 1608.7 1941.3 True False 1538.4919558038048 1418.2297504263997 1314.2227028003015 1176.7571738680742 1555.4012751916944 1270.667146347351 1609.9203481850445 1586.7077749190712 1273.7215358085484 1507.1264074575406 1702.5324069146204 0.9036491461515881 0.8330118972575433 0.7719222832192515 0.6911804844881798 0.9135810096034757 0.7463394771146187 0.9456033504246711 0.9319692056814061 0.7481335043230245 0.8852262672572557 1.0 10.733466544191678 -7.7630814025857 24.999921247200287 0.8870702237141187 0.8085794837437587 0.2222501051580663 0.08375429999917006 77.84373495079396 1185185.306053247 0.016599438464918452 0.023594674150707397 1.7255144374971524e-08 7.7630814025857 -0.07849073997036005 ESSPTS(ph)PVAETEGTIMEESSR ddPTM_A549_MK2206_60min_R1 1 ESSPTSPVAETEGTIMEESSR 21 0 Q8IWV8-4;Q8IWV8 Q8IWV8-4 UBR2 E3 ubiquitin-protein ligase UBR2 1 ES(0.013)S(0.045)PT(0.187)S(0.752)PVAET(0.002)EGT(0.001)IMEESSR 43.208 0.020384 2359700.0 314.61 579.45 485.37 304.86 448.02 484.4 318.68 291.59 495.96 506.43 450.44 True False 367.70847652398925 608.9415299689406 554.2027644539916 379.55071368568537 382.1168514885054 535.6588864813032 376.5800309392647 332.923775456923 383.6258518853753 392.02711126908986 338.58331648843375 1.0860206590732902 1.7984983320633947 1.636828329882945 1.1209965027873754 1.12857554663819 1.5820593053337926 1.11222264240574 0.9832846429345432 1.1330323533483382 1.1578453283963912 1.0 8.403367076734238 -7.310800852035009 0.5117937793172898 1.03750143439093 1.5139718418668195 0.27707908679595417 0.2284056633166734 0.8626551267756696 0.4204627009133758 0.05523778732745223 0.17318967474122127 4.8887648477468516e-08 7.310800852035009 0.47647040747588965 ESSPTS(ph)PVAETEGTIMEESSR ddPTM_A549_PD325901_60min_R1 3 ESSPTSPVAETEGTIMEESSR 21 0 Q8IWV8-4;Q8IWV8 Q8IWV8-4 UBR2 E3 ubiquitin-protein ligase UBR2 1 ES(0.001)S(0.016)PT(0.174)S(0.808)PVAET(0.001)EGTIMEESSR;ES(0.001)S(0.014)PT(0.176)S(0.807)PVAET(0.001)EGTIMEESSR;ESS(0.002)PT(0.103)S(0.895)PVAETEGTIMEESSR 96.544 1.0086e-06 8673100.0 1816.25 1620.8 1682.98 1683.04 2146.23 1842.5900000000001 2132.01 1804.42 2175.02 2322.15 2316.13 True False 2000.6343629474175 1757.3905041980945 1797.1971433808815 1786.9975583388293 1995.486208891548 1827.5845579487684 2213.1448072306384 1768.4294275598934 2083.6114732357946 2175.529052699401 2031.2606931577618 0.984922501423127 0.8651723090580198 0.884769320567608 0.8797480128268492 0.9823880389224686 0.8997291997550733 1.0895424770860518 0.8706068273347644 1.025772556055643 1.0710240492653664 1.0 10.988159692484421 -7.39857976637182 1.026548438537277 1.0061210740658986 0.9013270128539079 0.2976141652208132 0.06631342417513116 0.41130774436619155 0.861296066870888 0.010019148696527942 0.020824447228801484 3.994111951725951e-08 7.39857976637182 -0.10479406121199064 ESSQADAAEAAREDHEDAEDLETKPT(ph)VDSEAEKAENEDR ddPTM_A549_PD325901_60min_R1 1 ESSQADAAEAAREDHEDAEDLETKPTVDSEAEKAENEDR 39 3 P52739-2;P52739 P52739-2 ZNF131 Zinc finger protein 131 1 ESSQADAAEAAREDHEDAEDLET(0.107)KPT(0.447)VDS(0.447)EAEKAENEDR 70.291 3.4791e-05 2657700.0 420.5 427.72 481.64 595.16 645.63 382.56 472.45 647.2 630.2 505.42 499.6 True False 463.18885044426094 463.76546548347056 514.3269867366032 631.9216814935697 600.2831761025847 379.4445581973637 490.4293432845596 634.2910882814222 603.7148855795336 473.5076949444832 438.15236722533604 1.0571410429149843 1.0584570578046473 1.1738541776999953 1.442241851836397 1.3700329406045795 0.8660105173007551 1.1193123213969496 1.4476495751881093 1.3778651691479986 1.080691855993019 1.0 8.77528884319687 ESSSCGKDT(ph)PSK ddPTM_A549_PD325901_60min_R1 4 ESSSCGKDTPSK 12 1 K7EPP5;O43148;O43148-2 K7EPP5 RNMT mRNA cap guanine-N7 methyltransferase 1 ES(0.005)S(0.063)S(0.228)CGKDT(0.694)PS(0.01)K;ESSS(0.004)CGKDT(0.971)PS(0.025)K;ES(0.009)S(0.008)S(0.007)CGKDT(0.915)PS(0.061)K;ES(0.039)S(0.035)S(0.032)CGKDT(0.82)PS(0.073)K 68.127 0.0017294 202126000.0 36811.0 36802.0 28084.9 26199.899999999998 25993.2 21858.600000000002 17936.199999999997 23152.0 19178.9 32737.4 43569.4 True False 40548.02562117408 39903.43369663025 29990.910202223284 27818.208318709894 24167.52730367191 21680.590808795743 18618.771906065245 22690.215197607362 18372.877529421323 30670.354977000363 38210.64000918245 1.0611710667874166 1.044301631352969 0.7848837442925879 0.7280225694211053 0.6324816150125772 0.5673966937896264 0.4872666854465391 0.5938192920127652 0.48083145231291896 0.8026653039475374 1.0 15.221686801870387 -5.8349843258678495 2.55044946580433 0.6961065993706185 1.0717515244578577 0.5112458456184856 0.14343472437655666 0.2699582335801454 3.438836806415076 0.029486349200684592 0.13140091443409865 1.4622299468791028e-06 5.8349843258678495 0.37564492508723923 ESSSPESFIT(ph)EEVDESSSPQQGTR ddPTM_A549_MK2206_60min_R1 1 ESSSPESFITEEVDESSSPQQGTR 24 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 ESSSPES(0.001)FIT(0.249)EEVDES(0.249)S(0.249)S(0.249)PQQGT(0.003)R 46.178000000000004 0.011939 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ESSSPESFIT(ph)EEVDESSSPQQGTR ddPTM_A549_PD325901_60min_R1 1 ESSSPESFITEEVDESSSPQQGTR 24 0 K7EPJ5;O60291-4;O60291;O60291-3;O60291-2 K7EPJ5 MGRN1 E3 ubiquitin-protein ligase MGRN1 1 ESSSPESFIT(0.392)EEVDES(0.064)S(0.236)S(0.236)PQQGT(0.072)R 68.49 6.656899999999999e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ESSSS(ph)AER ddPTM_A549_PD325901_60min_R1 1 ESSSSAER 8 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 ESS(0.021)S(0.003)S(0.976)AER 118.67 0.0012382 19981000.0 2160.9 2483.8 2112.7 2143.5 2484.0 1899.1 1150.4 1653.7 1899.4 2172.2 2747.3 True False 2380.272977229499 2693.1185428968583 2256.0805266971606 2275.8991267582946 2309.5324093347904 1883.6343592445987 1194.1791015230347 1620.715656197446 1819.574823341425 2035.0469212900284 2409.399516569585 0.9879112869659924 1.1177550773029215 0.9363663067008852 0.9445918417044578 0.9585510387347542 0.7817858127266699 0.4956334942837804 0.6726637259830456 0.7551984678456601 0.8446282599854813 1.0 11.234457919743054 -7.1111725709528715 4.084900521929346 0.8255272106666673 0.9965723584231001 0.3833798400295334 0.13186233150751225 0.31697924135634753 9.132089370260775 0.02502540518059467 0.04473149088029132 7.741541193354048e-08 7.1111725709528715 0.17104514775643276 ESSTESSQSAKPVSGQDTSGNTEGS(ph)PAAEK ddPTM_A549_MK2206_60min_R1 2 ESSTESSQSAKPVSGQDTSGNTEGSPAAEK 30 1 Q96S66-4;Q96S66-3;Q96S66-2;Q96S66 Q96S66-4 CLCC1 Chloride channel CLIC-like protein 1 1 ESSTESSQSAKPVSGQDTSGNT(0.005)EGS(0.995)PAAEK;ESSTESSQSAKPVSGQDTSGNT(0.001)EGS(0.999)PAAEK 336.84 2.1362999999999998e-247 82429000.0 3205.1 3765.2000000000003 4173.5 3408.8 5053.7 4153.2 3751.7799999999997 3378.4 6456.0 5476.2 5504.0 True False 3746.0425228283834 3956.8325975305106 4765.3650564491745 4243.956153026846 4310.307424595906 4592.688867328964 4433.4298621730695 3857.2985459160814 4993.726308113528 4239.122616613921 4137.204897327812 0.9054525013368138 0.9564023769009355 1.1518320157474158 1.0258027480746683 1.041840453050778 1.110094612499213 1.0716002644772529 0.9323440926040379 1.2070290043741696 1.0246344384228918 1.0 12.014440694262843 -5.614763076288068 5.740714285672635 1.0816444461715038 0.9176147742275018 0.30891059934602483 0.07308726578670902 0.16449221585074128 8.020679046616982 0.011841828333925062 0.047951693638822776 2.427934261849647e-06 5.614763076288068 -0.16402967194400198 ESSTESSQSAKPVSGQDTSGNTEGS(ph)PAAEK ddPTM_A549_PD325901_60min_R1 2 ESSTESSQSAKPVSGQDTSGNTEGSPAAEK 30 1 Q96S66-4;Q96S66-3;Q96S66-2;Q96S66 Q96S66-4 CLCC1 Chloride channel CLIC-like protein 1 1 ESSTESSQSAKPVSGQDTSGNTEGS(1)PAAEK;ESSTESSQSAKPVSGQDT(0.001)S(0.004)GNT(0.034)EGS(0.961)PAAEK 308.81 2.3711999999999988e-204 114301000.0 8339.3 8692.4 8293.1 7742.6 9990.900000000001 9216.5 9762.4 9703.5 9318.9 9738.8 9082.9 True False 9185.899596931808 9424.939053980457 8855.919636461507 8220.842817279581 9289.173650733881 9141.443879720835 10133.913474190253 9509.956080251508 8927.259040347693 9123.890505965994 7965.7608812470025 1.1531729026108801 1.1831812672369633 1.1117481140201078 1.032022293894497 1.1661376470140419 1.147592052535951 1.2721839916193713 1.193854073957938 1.1207038691513136 1.1453884496389366 1.0 12.959596457733898 -10.034690170671714 0.8734268958594994 1.0110388890987176 1.1539714800638852 0.06148043668226777 0.06887065682560058 0.3505480468631744 0.5389343372007105 0.025700059492360844 0.012125534091618925 9.23229832181656e-11 10.034690170671714 0.14293259096516753 ESSTSEGADQKMS(ph)S(ph)PEDDSDTKR ddPTM_A549_MK2206_60min_R1 4 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 2 ES(0.02)S(0.02)T(0.02)S(0.021)EGADQKMS(0.949)S(0.958)PEDDS(0.008)DT(0.004)KR;ES(0.015)S(0.015)T(0.015)S(0.036)EGADQKMS(0.947)S(0.96)PEDDS(0.01)DT(0.003)KR;ES(0.014)S(0.017)T(0.017)S(0.017)EGADQKMS(0.96)S(0.96)PEDDS(0.011)DT(0.003)KR;ES(0.003)S(0.003)T(0.003)S(0.003)EGADQKMS(0.966)S(0.97)PEDDS(0.042)DT(0.01)KR 52.909 0.0023344 77241600.0 4997.200000000001 4389.88 5146.2 4249.8 6195.2 5530.1 4463.36 4427.21 7186.1 7996.2 7046.400000000001 True False 5840.605190190008 4613.306141306501 5876.008542829453 5291.001190780775 5283.894286731817 6115.2915114167145 5274.294737332363 5054.780575261997 5558.459823843653 6189.852866397914 5296.584409253401 1.102711622982195 0.8709964355985381 1.1093958084692788 0.9989458832256366 0.9976040932153535 1.1545726526576243 0.9957916894740512 0.9543472141085941 1.0494423187389863 1.1686499049432553 1.0 12.370846598237753 -14.67727426592254 8.147698893959944 1.0224202819365409 1.0224222172433417 0.0 0.08714154949527449 0.0 0.0 0.0 0.008723720875483515 2.102450279716219e-15 14.67727426592254 1.9353068008154395e-06 ESSTSEGADQKMS(ph)S(ph)PEDDSDTKR ddPTM_A549_PD325901_60min_R1 5 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 2 ESSTSEGADQKMS(0.99)S(0.803)PEDDS(0.039)DT(0.168)KR;ES(0.002)S(0.007)T(0.007)S(0.007)EGADQKMS(0.979)S(0.962)PEDDS(0.03)DT(0.007)KR;ESS(0.001)T(0.001)S(0.005)EGADQKMS(0.991)S(0.966)PEDDS(0.026)DT(0.011)KR;ES(0.001)S(0.002)T(0.002)S(0.004)EGADQKMS(0.873)S(0.966)PEDDS(0.124)DT(0.027)KR;ESSTSEGADQKMS(0.986)S(0.855)PEDDS(0.126)DT(0.031)KR 93.804 1.5115999999999999e-07 114385200.0 12371.3 11674.7 12696.9 13079.999999999998 14289.2 13222.3 13163.0 15336.3 15610.6 14972.800000000001 15452.5 True False 13627.225268730295 12658.567941363215 13558.587986662187 13887.921893164681 13285.575887063884 13114.621972639585 13663.925168069987 15030.405465405398 14954.540769323816 14027.414852725968 13551.940461468183 1.0055552787791657 0.934077889240654 1.0004905220188138 1.024792127197709 0.9803449125856445 0.9677301940580383 1.0082633706162012 1.1090961850179972 1.1034981161438544 1.0350853364955142 1.0 13.726211821069707 -8.01440177880562 21.802509994514303 1.0549432065311979 0.9856113012543857 0.5002970880350295 0.035497333117965664 108.28435995350597 163930.30286613773 0.007333967235505281 0.009669258471952179 9.673824877060123e-09 8.01440177880562 -0.06933190527681221 ESSTSEGADQKMS(ph)SPEDDSDTKR ddPTM_A549_MK2206_60min_R1 3 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 ESSTSEGADQKMS(0.851)S(0.149)PEDDSDTKR;ES(0.001)S(0.001)T(0.001)S(0.003)EGADQKMS(0.928)S(0.065)PEDDS(0.001)DTKR;ESSTSEGADQKMS(0.958)S(0.042)PEDDSDTKR 109.41 3.3608e-11 43714100.0 4222.379999999999 3972.0499999999997 3872.04 4044.05 5756.49 4306.27 4013.44 4170.87 6494.1 6559.1 6278.3 True False 4935.01451672026 4174.210379002726 4421.153495429125 5034.842431544301 4909.717946576195 4761.956633129324 4742.63009719117 4762.103595253667 5023.19671894672 5077.394754507211 4719.224837734961 1.0457256618205268 0.8845118684801168 0.9368389189846487 1.0668791177919008 1.040365338671311 1.0090548335507727 1.0049595559145774 1.0090859747083563 1.0644114005294254 1.0758959212767996 1.0 12.204334192004206 -6.249453895025383 24.685121058636373 1.0288197389031277 0.9485741142266568 0.3826309226379463 0.043614864927964465 472.43207432184624 973010.9689622311 0.005740513220142283 0.015053774398887805 5.630488878446684e-07 6.249453895025383 -0.0802456246764709 ESSTSEGADQKMS(ph)SPEDDSDTKR ddPTM_A549_PD325901_60min_R1 5 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 ESSTSEGADQKMS(0.951)S(0.049)PEDDSDTKR;ES(0.001)S(0.001)T(0.001)S(0.002)EGADQKMS(0.867)S(0.127)PEDDS(0.001)DTKR;ESSTSEGADQKMS(0.958)S(0.042)PEDDSDTKR;ESSTSEGADQKMS(0.871)S(0.128)PEDDSDTKR;ESSTSEGADQKMS(0.519)S(0.481)PEDDSDTKR 174.06 5.9893e-41 251193400.0 13996.099999999999 14949.599999999999 15115.39 15007.699999999999 17367.5 16887.2 16970.0 17690.4 17910.6 16393.9 18888.9 True False 15416.973768615748 16209.455257625763 16141.211261624 15934.691544040346 16147.666714622359 16749.67624213332 17615.802636340322 17337.551094149672 17157.87976778926 15358.786356199527 16565.685046602575 0.9306571823166218 0.9784959216612734 0.9743763216682892 0.9619096040527683 0.9747660099293058 1.011106766488264 1.0633911357594665 1.0465942727617774 1.0357482784153342 0.9271446555329405 1.0 14.015910244477643 -7.259403247689258 3.324272531983744 1.0236197041422508 0.9641942802894929 0.3216989182570651 0.03518749155164146 0.13502943569879158 3.1353232527265993 0.003554035094172678 0.006144315334940066 5.5029650214632324e-08 7.259403247689258 -0.05942542385275784 ESSTSEGADQKMSS(ph)PEDDSDTKR ddPTM_A549_MK2206_60min_R1 1 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 ESSTSEGADQKMS(0.402)S(0.598)PEDDSDTKR 140.9 1.1696e-27 24099000.0 3329.1 3492.3 3691.9 3159.1 4306.8 3223.8 3279.7 3129.0 4959.1 5655.8 5726.4 True False 3890.9706913194505 3670.0431531806553 4215.466934684245 3933.079641817388 3673.2754251834594 3564.9403762147504 3875.57903687557 3572.545332160612 3835.87176805542 4378.150851876304 4304.376839400071 0.9039567947916383 0.852630540984923 0.9793443027799076 0.9137396163402755 0.8533814678027651 0.8282128887004279 0.9003809799830944 0.8299796847384164 0.8911561211239234 1.017139301513042 1.0 12.071588673089767 -10.392280323048906 0.8294376767975847 0.9977580178264347 0.8834826182695567 0.5579199492266701 0.042208252790371 0.38374968705229995 0.4921392356358093 0.025320054139896346 0.00824846485167334 4.052468772524072e-11 10.392280323048906 -0.11427539955687804 ESSTSEGADQKMSS(ph)PEDDSDTKR ddPTM_A549_PD325901_60min_R1 1 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 ESSTSEGADQKMS(0.397)S(0.603)PEDDSDTKR 151.02 2.6575e-28 30501000.0 5001.8 5491.9 4896.4 4424.5 6668.8 6212.0 5450.6 5798.2 4824.1 5495.3 6133.2 True False 5509.579053869454 5954.721686824726 5228.699148445111 4697.791316231431 6200.406494111047 6161.411531582037 5658.025565682765 5682.5503524000915 4621.359853259645 5148.325820166234 5378.855281558104 1.0243032700209556 1.1070611450062677 0.9720839983132067 0.8733812438379289 1.1527371846886654 1.1454875078545055 1.051901430603984 1.0564609112803673 0.8591716287858494 0.9571415386128231 1.0 12.393083458310278 -8.7382736401594 24.659154358977286 0.9334977115587493 1.0484301177417044 0.26634337131267705 0.08055102940411016 204.77019474678036 217970.76920825266 0.01535512886781942 0.017405322244944506 1.8269487300142853e-09 8.7382736401594 0.11493240618295508 ESSVDCLKES(ph)PNKQQER ddPTM_A549_PD325901_60min_R1 2 ESSVDCLKESPNKQQER 17 2 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BRD5;H3BMM1 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 ESSVDCLKES(1)PNKQQER;ESS(0.001)VDCLKES(0.999)PNKQQER 60.93899999999999 0.00072205 58758000.0 9915.3 10306.3 11218.7 10885.900000000001 11554.5 10845.2 10992.5 12181.7 10844.9 11268.8 13201.0 True False 10921.893956741927 11174.848070962988 11980.068445523479 11558.297319327323 10742.951780861036 10756.880286914598 11410.8256028268 11938.726437141224 10389.126567155636 10557.286044854554 11577.360688033737 0.9433837513614571 0.9652327825039793 1.0347840728419195 0.9983533925201001 0.9279275363654222 0.9291306176573404 0.9856154533235657 1.0312131373328457 0.8973657163410094 0.9118905706865017 1.0 13.499018776548551 -6.739685141792249 24.959153983294698 0.9561577328329516 0.9875199210682047 0.10510699949680646 0.04281322288742823 499.2820785855029 572835.0035086306 0.006994552958209353 0.014550437630221935 1.8210205979001138e-07 6.739685141792249 0.03136218823525316 EST(ph)LGRR ddPTM_A549_MK2206_60min_R1 1 ESTLGRR 7 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 ES(0.027)T(0.973)LGRR 46.333999999999996 0.038889 8329200.0 526.98 609.1 555.51 426.81 849.8 740.97 530.64 609.06 976.25 1180.1 700.67 True False 615.9213405759884 640.1005883235507 634.2896711412673 531.3784691602286 724.7955457232528 819.3789535839215 627.0504192845846 695.3961201680228 755.1309337509026 913.5145903849555 526.6743014917658 1.169453946834765 1.2153632453881142 1.2043300182763597 1.008931834447093 1.3761741244452657 1.5557602701766375 1.1905848026161725 1.3203532395607018 1.4337721275028046 1.7344962300182356 1.0 9.040767256225218 -4.172094791546429 13.561329760746451 1.232388798757614 0.5055680769467543 0.0 0.22081899042925665 0.0 0.0 0.025495438843995317 0.0 6.72829784658566e-05 4.172094791546429 -0.7268207218108598 EST(ph)LGRR ddPTM_A549_PD325901_60min_R1 1 ESTLGRR 7 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 ES(0.05)T(0.95)LGRR 55.111999999999995 0.025211 13398000.0 861.59 971.11 928.73 721.85 1076.9 1177.1 882.89 1163.2 1055.9 969.07 1177.9 True False 949.0579825309658 1052.9488478108417 991.7592027071777 766.4370350597035 1001.2622591033148 1167.5140878662614 916.4888620859454 1139.9990634872531 1011.52419499116 907.8827548174796 1033.025767323305 0.918716659885542 1.019286140886069 0.9600527247998334 0.7419340923563162 0.9692519690943496 1.1301887375872839 0.8871887721258678 1.1035533667675386 0.9791858315520453 0.8788578015531151 1.0 10.012660525240582 -6.990418785843473 24.999593254285 1.0015664158760136 0.9131558752890863 0.15327118853488064 0.09457983759419825 264.56217253605547 690297.7916915189 0.011897316587966437 0.022463259004938164 1.0223067166442614e-07 6.990418785843473 -0.08841054058692732 EST(ph)SFEEDQVIEYR ddPTM_A549_PD325901_60min_R1 1 ESTSFEEDQVIEYR 14 0 Q5JSG7;A0A669KA35;Q92824 Q5JSG7 PCSK5 Proprotein convertase subtilisin/kexin type 5 1 ES(0.068)T(0.466)S(0.466)FEEDQVIEYR 62.891000000000005 0.0062183 1606900.0 372.36 390.69 512.1 381.95 583.28 538.7 569.95 447.07 650.54 517.06 618.17 True False 410.16171308305593 423.6148174266741 546.8541855074628 405.54218402861227 542.3124250067619 534.3130058054161 591.6397591386075 438.1528381303698 623.2000661137884 484.41274335798823 542.1390089024935 0.7565618897510945 0.781376751110827 1.0086973571861482 0.7480409588116378 1.000319873872606 0.9855645822038883 1.091306379772087 0.8081927899218443 1.1495207979506858 0.8935212840312554 1.0 9.082519007665791 -6.321514538472131 0.48466885756785494 1.0609375167306865 0.7131065547138781 0.22148107984921028 0.11741048396801657 1.341261162805296 0.38244289396833353 0.02419754008419956 0.2217774936164424 4.769638469772148e-07 6.321514538472131 -0.3478309620168084 ESTEASKEPS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 ESTEASKEPSPTK 13 1 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 1 ES(0.022)T(0.02)EAS(0.017)KEPS(0.838)PT(0.103)K 41.202 0.027377999999999996 7871000.0 2658.1 2322.3 2401.8 1951.8 3115.3 2609.5 1892.5 2351.7 3251.8 3618.1 3507.2 True False 3106.7222956943983 2440.495150654709 2742.4113555959307 2429.991087619632 2657.0434968129557 2885.635557954092 2236.3427530832137 2685.0606767791987 2515.272492057552 2800.768697120417 2636.265446204233 1.1784557963112334 0.9257395358910465 1.0402637410980482 0.9217550877201685 1.0078816230886916 1.0945921861202972 0.848299535353377 1.0185092251029662 0.9541044114806838 1.0624001088938295 1.0 11.364279927633909 ESTEASKEPS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 ESTEASKEPSPTK 13 1 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 1 EST(0.001)EAS(0.02)KEPS(0.956)PT(0.023)K;ES(0.005)T(0.005)EAS(0.042)KEPS(0.758)PT(0.19)K 54.073 0.0057542999999999995 27418000.0 11542.1 11540.0 11822.8 12929.599999999999 14366.9 10510.599999999999 11603.6 11749.7 14699.0 12375.3 16466.5 True False 12713.845495155072 12512.51629963353 12625.166304271877 13728.232026747872 13357.818507114327 10425.005158378322 12045.18134773356 11515.343016038663 14081.252147149424 11593.92144601809 14441.224889743788 0.8803855346221007 0.8664442521437337 0.8742448373086633 0.9506279509917275 0.924978220968022 0.721892030487123 0.8340830808810472 0.7973937878508425 0.975073254149652 0.8028350458174872 1.0 13.817905494864096 -8.851808002571877 6.978754132327471 0.9889193374964382 0.8575731935074322 0.0 0.0806226348724634 0.1349813725394126 8.86012462555307 0.01061816563030744 0.011278521847055002 1.4066692616865976e-09 8.851808002571877 -0.13134614398900601 ESTEASKEPS(ph)PTKTPTISPVITAPPSSPVLDTSDIR ddPTM_A549_MK2206_60min_R1 1 ESTEASKEPSPTKTPTISPVITAPPSSPVLDTSDIR 36 2 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 1 ES(0.032)T(0.032)EAS(0.03)KEPS(0.495)PT(0.126)KT(0.126)PT(0.126)IS(0.033)PVIT(0.001)APPSSPVLDTSDIR 59.478 0.00026532 6724200.0 470.59 616.85 820.72 753.09 1110.4 731.03 490.75 630.36 937.79 1140.0 887.28 True False 550.0140871791233 648.2450302206246 937.1104370741494 937.5970838074949 947.0616309379857 808.3871093815595 579.9129226291082 719.7154603965371 725.3820623429032 882.4732082356151 666.9438883177728 0.8246782027891723 0.9719633713949877 1.4050813771422594 1.4058110438231743 1.4200019634736463 1.2120766432398802 0.8695078143557442 1.07912445559981 1.0876208254528406 1.323159599620097 1.0 9.38142157869442 -7.626141163219839 11.23430507620933 1.0341847511323445 1.2248397598225618 0.08368384975386356 0.20092385904548818 0.5104939592869031 51.92915320083204 0.029180463163844678 0.043284360518341024 2.3651508031443568e-08 7.626141163219839 0.19065500869021723 ESTESSNT(ph)TIEDEDVK ddPTM_A549_PD325901_60min_R1 1 ESTESSNTTIEDEDVK 16 0 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 EST(0.001)ES(0.022)S(0.139)NT(0.762)T(0.076)IEDEDVK 70.529 0.0014629 992650.0 648.94 651.92 482.25 776.89 654.25 807.6 849.35 617.8 770.41 801.89 841.18 True False 714.8199110756219 706.8595863134393 514.9783850048309 824.8767308547948 608.2977370399705 801.0231733589267 881.6724790321541 605.4774943452758 738.0323468729428 751.2585285485962 737.7201926793591 0.9689580387916933 0.9581675997591501 0.69806735685851 1.1181430832994932 0.824564303751354 1.0858089304152765 1.1951312811839516 0.8207413872544479 1.0004231335900537 1.018351586419326 1.0 9.526929915032255 -6.284504387348374 24.958124116455558 1.001196945210088 0.8833745736034324 0.18262552006452692 0.1242296446862766 982.8217471561724 1063487.5845701927 0.016086079498643276 0.037403715237727515 5.193924264520186e-07 6.284504387348374 -0.11782237160665554 ESTESSNTT(ph)IEDEDVK ddPTM_A549_MK2206_60min_R1 2 ESTESSNTTIEDEDVK 16 0 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTESSNT(0.016)T(0.984)IEDEDVK;ESTESS(0.001)NT(0.027)T(0.972)IEDEDVK 213.51 2.8730999999999996e-46 72172000.0 2521.2 2702.6 2529.2 2375.0 3455.6000000000004 3004.1000000000004 3148.0 3156.3 3850.0 3193.2 3585.8 True False 2946.7169225780535 2840.1507962620744 2887.878591295375 2956.8751066178006 2947.2858176056393 3321.991868039812 3719.9508516279834 3603.7151907633543 2977.9811471866574 2471.853902226285 2695.346896954591 1.0932607323782626 1.0537236596413968 1.0714311373271919 1.0970295177807 1.093471797984782 1.2324913990823416 1.380138065282457 1.337013500872599 1.1048600647847622 0.9170819181082681 1.0 11.396255247550497 -9.535449412881139 1.606364918762986 1.0276410093220665 1.1655279068393847 0.30766536188950466 0.10981187171212099 0.39668785304143805 2.077095503763771 0.028025322890574102 0.022296477079823983 2.914409588768619e-10 9.535449412881139 0.1378868975173182 ESTESSNTT(ph)IEDEDVK ddPTM_A549_PD325901_60min_R1 2 ESTESSNTTIEDEDVK 16 0 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTESSNT(0.059)T(0.941)IEDEDVK;ESTESSNT(0.015)T(0.985)IEDEDVK 326.56 1.0247999999999996e-164 127617000.0 5869.3 5388.7 5473.6 5303.8 6983.9 4699.1 5953.2 6016.0 5729.4 5892.6 6111.5 True False 6465.147015249704 5842.824660644294 5845.071411430677 5631.403680196239 6493.374957147033 4660.83208758164 6179.752283716041 5896.0061605393 5488.613242525194 5520.540230362592 5359.824243990476 1.206223697073376 1.0901149729294513 1.090534156597442 1.0506694667292986 1.211490276836505 0.8695867393053871 1.1529766653533242 1.1000372199051116 1.0240285861386442 1.029985309042981 1.0 12.387969978165913 -2.0000000003765046 0.15172117871308943 0.9834244505750704 1.6234589420663401 0.2027558477979584 0.08344024986671436 61.25899040272733 0.5778383479785726 0.13251483726773888 8.728694190978334 0.00999999999133066 2.0000000003765046 0.6400344914912697 ESTESSNTT(ph)IEDEDVKAR ddPTM_A549_MK2206_60min_R1 1 ESTESSNTTIEDEDVKAR 18 1 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 ESTES(0.008)S(0.033)NT(0.216)T(0.743)IEDEDVKAR 103.92 2.4261999999999997e-09 63278000.0 7190.8 10743.0 10117.0 7843.9 7830.5 4436.3 4254.8 3986.7 8545.7 16406.0 17692.0 True False 8404.431241819075 11289.772812936972 11551.74272818887 9765.655852126056 6678.643823000628 4905.746321422391 5027.842084976727 4551.8269337567 6610.112594678712 12699.873205538159 13298.588125640208 0.6319792118093346 0.8489452193176688 0.8686442966014302 0.7343377928441502 0.5022069831701861 0.36889226698914873 0.3780733742165341 0.3422789615523618 0.49705371218574335 0.954979061352558 1.0 13.6989854664594 -2.5574532762505635 8.54244592309185 0.6767120593187574 13.191408474326916 0.0 0.23592840668694062 0.0 0.0 0.03659495881873937 0.0 0.0027704270806614027 2.5574532762505635 12.514696415008158 ESTGAQVQVAGDMLPNSTER ddPTM_A549_MK2206_60min_R1 1 ESTGAQVQVAGDMLPNSTER 20 0 F8VZX2;H3BRU6;F8W0G4;P57721;P57721-4;E9PFP8;P57721-5;P57721-3;P57721-2;J3QT27;F8VXH9;Q15365;Q15366-6;Q15366-3;Q15366;Q15366-2;Q15366-4;Q15366-5;Q15366-7;Q15366-8 F8VZX2;Q15365;Q15366-6;Q15366-4 PCBP2;PCBP3;PCBP1 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 0 75.669 0.00021413 1710600.0 911.86 948.53 788.91 874.75 1325.9 851.98 865.63 1277.1 1509.2 1405.0 1530.0 False True 1065.759675163424 996.8061255008014 900.7893007507643 1089.06378926902 1130.8618664091093 942.1359581014467 1022.9037661037902 1458.132835954719 1167.3686096971705 1087.6095241851215 1150.0587741481752 0.9267001818692354 0.8667436377233112 0.7832550135691633 0.9469635932960617 0.9833078898482518 0.8192067912348805 0.8894360784834096 1.2678767978921146 1.0150512616729666 0.9456990795889466 1.0 10.16749187714076 -8.064975839849385 24.999843235712195 1.0293301673713595 0.8861413845125868 0.42296375202657455 0.09302521893004473 161.5461082343508 62155.439315442665 0.014330447907082117 0.018500537066161015 8.61041651290432e-09 8.064975839849385 -0.14318878285877268 ESTGAQVQVAGDMLPNSTER ddPTM_A549_PD325901_60min_R1 1 ESTGAQVQVAGDMLPNSTER 20 0 F8VZX2;H3BRU6;F8W0G4;P57721;P57721-4;E9PFP8;P57721-5;P57721-3;P57721-2;J3QT27;F8VXH9;Q15365;Q15366-6;Q15366-3;Q15366;Q15366-2;Q15366-4;Q15366-5;Q15366-7;Q15366-8 F8VZX2;Q15365;Q15366-6;Q15366-4 PCBP2;PCBP3;PCBP1 Poly(rC)-binding protein 3;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 0 69.92 0.00058516 4159700.0 1122.9 1262.4 1376.6 1401.7 1659.3 1520.3 1421.0 1486.0 1291.6 1703.0 1740.3 False True 1236.8959813647102 1368.7868783931856 1470.0243541682735 1488.2798255083285 1542.756492274241 1507.9191808538592 1475.0769326010363 1456.3605642555508 1237.3185436599895 1595.4722893642022 1526.2541326706414 0.8104128630271998 0.8968276311875275 0.9631583120407498 0.9751192764367063 1.0108123275477878 0.9879869600846225 0.9664687557765658 0.9542058121783489 0.8106897253702618 1.045351658817423 1.0 10.575779486295973 -5.345240255282 3.081655114535506 0.9342868731069285 0.8017458055481314 0.24749989092168556 0.06378263723402046 0.4044511446280863 6.004728839137467 0.010709624655426176 0.11513446622449176 4.516060430774375e-06 5.345240255282 -0.13254106755879713 ESTGVTT(ph)LR ddPTM_A549_MK2206_60min_R1 2 ESTGVTTLR 9 0 Q9UBH6-2;Q9UBH6 Q9UBH6-2 XPR1 Xenotropic and polytropic retrovirus receptor 1 1 ESTGVT(0.002)T(0.998)LR;ESTGVT(0.035)T(0.965)LR 80.23100000000001 0.0017904 10981400.0 2681.0 2851.8 2578.0 2485.79 3286.5 2228.36 2440.1000000000004 2506.0 3264.9 4328.6 4018.8 True False 3133.4872558431525 2996.94443897735 2943.5991650954766 3094.808661591355 2803.0602036002233 2464.1635761343464 2883.434584834004 2861.233174303129 2525.4053629739556 3350.766253656737 3020.8210467625377 1.0372965519428439 0.9920959873439783 0.9744367903720014 1.024492551423432 0.9279133587222281 0.815726432644936 0.9545201586582651 0.9471706963143541 0.835999658331457 1.1092236851460655 1.0 11.560725006101254 -6.819068905312159 6.758464393154788 0.9171146936298527 1.0035767169769185 0.09366300741029132 0.0772038095639363 0.21570721151959968 19.79895387313357 0.009698384020704427 0.01853698209203696 1.5168096908186755e-07 6.819068905312159 0.08646202334706588 ESTGVTT(ph)LR ddPTM_A549_PD325901_60min_R1 2 ESTGVTTLR 9 0 Q9UBH6-2;Q9UBH6 Q9UBH6-2 XPR1 Xenotropic and polytropic retrovirus receptor 1 1 ESTGVT(0.023)T(0.976)LR;ESTGVT(0.007)T(0.993)LR 74.165 0.0023043000000000004 15836800.0 3131.2 3355.3 4323.799999999999 3982.3 4123.0 4335.3 3944.3 4205.2 5005.4 4131.200000000001 4435.299999999999 True False 3449.0771189323923 3638.062906426376 4617.239069121591 4228.277626540497 3833.4147035778346 4299.994754164135 4094.4024949037753 4121.323987084416 4795.040444747377 3870.355326964999 3889.7862176832105 0.8867009459935543 0.935286080733053 1.187016152232566 1.0870205687187855 0.9855078117534821 1.1054578615698958 1.052603476327405 1.0595245487653333 1.2327259588068937 0.9950046378821856 1.0 11.925475151656704 -5.637137562557922 6.153479247499672 1.0983230073256125 0.8992922639948855 0.4051848309317523 0.07576851169694224 0.14723044240934055 7.190548000120456 0.012463241009661756 0.049731566106618594 2.3060166434184647e-06 5.637137562557922 -0.199030743330727 ESTLHLVLR ddPTM_A549_MK2206_60min_R1 2 ESTLHLVLR 9 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;A0A2R8Y422;M0R1M6;P62987;M0R2S1 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 ; 112.41 0.00030103 5264400.0 380.1 328.79 449.8 403.75 475.78999999999996 350.55 444.58 306.59 662.29 526.57 666.26 False True 444.25158744721483 345.52400662436435 513.5884035919104 502.6687681250264 405.8019212752017 387.64496832374266 525.3544312632682 350.0500713924967 512.2823724598056 407.61747128125245 500.809254159453 0.8870674488490368 0.6899313536134313 1.02551699938913 1.0037130183800105 0.8102923775965173 0.7740371510793211 1.0490110294487494 0.6989688558771001 1.0229091579380034 0.8139176101395899 1.0 8.968117411004117 ESTLHLVLR ddPTM_A549_PD325901_60min_R1 2 ESTLHLVLR 9 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;A0A2R8Y422;M0R1M6;P62987;M0R2S1 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 ; 135.0 4.9152e-05 8425000.0 596.01 685.98 697.88 816.03 1026.51 644.99 630.56 1034.83 1027.19 663.88 896.5799999999999 False True 656.516496440628 743.7899420470197 745.2423334933575 866.4343197614045 954.4114788672517 639.7374152857526 654.5563058556713 1014.18950384157 984.0207764494463 621.9625035015304 786.3063438888942 0.8349373008917176 0.9459289599119881 0.9477760662689769 1.1019042724190873 1.2137908924236163 0.8135981863274248 0.8324443913530993 1.2898147289841475 1.2514470779705287 0.7909926052808424 1.0 9.61894768381645 -8.256865777594745 24.99745795567266 1.1348872891876918 0.965159180527075 0.08721813277193113 0.1686247770444571 468.12810176322415 2558600.700638374 0.025028055390090984 0.03176407168788184 5.535211532056531e-09 8.256865777594745 -0.16972810866061683 ESTNLGNLEESS(ph)E ddPTM_A549_MK2206_60min_R1 2 ESTNLGNLEESSE 13 0 P24386 P24386 CHM Rab proteins geranylgeranyltransferase component A 1 1 ESTNLGNLEES(0.013)S(0.987)E;ESTNLGNLEES(0.134)S(0.866)E 101.39 0.00014324 3004500.0 913.1099999999999 885.05 534.44 537.27 1635.85 1030.28 1072.3400000000001 1228.46 1526.76 1007.9000000000001 1172.5 True False 1067.220644603858 930.0952646458029 610.2316283140518 668.9011741189671 1395.2186319973916 1139.3035457554854 1267.170297406211 1402.5979670009663 1180.9512977347276 780.2146899830487 881.3358906462322 1.210912497641878 1.0553243939309203 0.6923939383276501 0.7589628213466956 1.5830725229791325 1.2927007260762984 1.437783608786281 1.5914454203975774 1.3399559807655228 0.8852637209758505 1.0 9.783548146963485 -6.742102208277613 24.99910979537216 1.2530028190780615 0.9214642539209039 0.3440325917337981 0.24244807757725034 257.9668012394388 333497.9381090632 0.036717421558665544 0.07634309113746643 1.8109138561016477e-07 6.742102208277613 -0.3315385651571576 ESTNLGNLEESS(ph)E ddPTM_A549_PD325901_60min_R1 2 ESTNLGNLEESSE 13 0 P24386 P24386 CHM Rab proteins geranylgeranyltransferase component A 1 1 ESTNLGNLEES(0.137)S(0.863)E;ESTNLGNLEES(0.008)S(0.992)E 123.84 5.21e-06 4660800.0 621.53 552.02 874.99 665.85 881.9 753.69 667.92 660.8199999999999 978.4000000000001 823.2 738.6700000000001 True False 684.6272680537973 598.5406627143586 934.372083142306 706.978042244932 819.9583863898348 747.5521985251228 693.3380610998485 647.639426696739 937.2812504776504 771.2230115118087 647.81827281493 1.056819939763235 0.9239329729208656 1.4423367205778699 1.0913215509851832 1.2657228435791317 1.1539535544078192 1.0702662925624555 0.9997239254808082 1.4468274357327595 1.19049283398669 1.0 9.339445352146301 -5.712893689005104 24.99998456456725 1.1948982459397324 0.9903760561540125 0.20015929695948076 0.14850028289727946 161.32158771087938 83074.72743106933 0.024720775313805718 0.09574285163028436 1.9368960389182403e-06 5.712893689005104 -0.2045221897857199 ESTPTYENS(ph)LLR ddPTM_A549_MK2206_60min_R1 2 ESTPTYENSLLR 12 0 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5 A0A2R8Y700 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 ESTPTYENS(1)LLR;ESTPTYENS(1)LLR 136.99 2.5592000000000002e-08 8418400.0 3159.8 4593.1 4109.3 3906.7999999999997 5499.5 4449.1 4072.9 4146.9 6116.9 6396.3 5679.799999999999 True False 3693.0969903070486 4826.8691712837035 4692.060531081009 4863.966175382918 4690.530835143598 4919.900808926442 4812.893209528463 4734.735774348625 4731.431916682099 4951.37138757672 4269.34890549464 0.8650258088660879 1.1305867189892904 1.0990107941382676 1.1392758668946 1.0986524968963998 1.1523773104124948 1.1273131608743157 1.1090065204685033 1.1082326653117431 1.1597485933286733 1.0 12.05980035393726 -10.657568469201104 0.9051920920256832 0.9994553062595601 1.0984046659822504 0.0 0.08800538780059185 0.7553573796019998 1.0926156973667984 0.04896875694313737 0.012781155404067372 2.200044831670462e-11 10.657568469201104 0.09894935972269026 ESTPTYENS(ph)LLR ddPTM_A549_PD325901_60min_R1 2 ESTPTYENSLLR 12 0 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5 A0A2R8Y700 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 ESTPT(0.001)YENS(0.998)LLR;ESTPTYENS(1)LLR 151.99 1.8612e-12 14985100.0 5586.4 5759.6 5983.8 7213.6 7229.6 6938.4 6161.7 7344.4 6895.5 6452.6 7436.0 True False 6153.527215509676 6244.981705317958 6389.896651512514 7659.167688725744 6721.817836766021 6881.895970819184 6396.186865311614 7197.910180429662 6605.706114747181 6045.181734792393 6521.419140687746 0.9435871369035679 0.9576108467488205 0.9798322287928634 1.1744633374259719 1.0307293078017281 1.0552758260671191 0.9807967755676374 1.1037337157983338 1.012924636837642 0.9269733480364629 1.0 12.670970231395756 -6.0114924051923495 24.803976242235073 1.0274564042022503 0.9551295905726015 0.22905378996357761 0.06149077949812279 538.9312040672461 1163180.8220177 0.007576129650157107 0.02144264933083316 9.73884816176336e-07 6.0114924051923495 -0.07232681362964877 ESTQLS(ph)PADLTEGK ddPTM_A549_MK2206_60min_R1 2 ESTQLSPADLTEGK 14 0 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ESTQLS(0.996)PADLT(0.003)EGK;ES(0.001)T(0.005)QLS(0.987)PADLT(0.007)EGK 91.441 6.5099e-05 2689700.0 2157.77 2728.6000000000004 2411.7 1732.1100000000001 3093.4 2374.8 2025.17 2238.58 3426.0 3339.3 3201.7 True False 2521.948823588468 2867.474085207093 2753.7153244611172 2156.477027757374 2638.3649578022005 2626.099759735341 2393.1171747749186 2555.905570363727 2650.016470197792 2584.9498107554277 2406.6295275753014 1.04791734444036 1.1914896133166355 1.144220700738891 0.8960569140569142 1.0962904458586837 1.0911940245248954 0.9943853623311949 1.0620270137459928 1.1011318692111722 1.074095443913125 1.0 11.232798357564585 ESTQLS(ph)PADLTEGKPTDPSK ddPTM_A549_MK2206_60min_R1 2 ESTQLSPADLTEGKPTDPSK 20 1 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ESTQLS(0.999)PADLTEGKPTDPSK;ES(0.005)T(0.027)QLS(0.965)PADLT(0.003)EGKPTDPSK 177.6 2.1605999999999997e-35 51967000.0 7705.1 7933.700000000001 7170.200000000001 7921.200000000001 11676.8 9008.5 8470.0 9493.2 12078.599999999999 11752.4 11134.5 True False 9005.532508391301 8337.491442427448 8187.042177489362 9861.894355596178 9959.158188163425 9961.773490641666 10008.889362544152 10838.890171705702 9342.816385560722 9097.52467760372 8369.496353433233 1.075994555478498 0.9961760051436481 0.9782001009094141 1.178313955719779 1.189935184579906 1.190247664849662 1.1958771400191157 1.2950468838258713 1.1162937399128234 1.0869859180799863 1.0 13.030925093785836 -4.000965243452346 11.567205627428427 1.0943596871331256 0.5504629161800133 0.0 0.09948422990244252 0.0 0.0 0.015000252197852688 0.0 9.977799128624962e-05 4.000965243452346 -0.5438967709531123 ESTQLS(ph)PADLTEGKPTDPSK ddPTM_A549_PD325901_60min_R1 2 ESTQLSPADLTEGKPTDPSK 20 1 Q08J23-3;Q08J23-2;Q08J23 Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ESTQLS(0.999)PADLT(0.001)EGKPTDPSK;EST(0.001)QLS(0.966)PADLT(0.033)EGKPTDPSK 183.25 3.4382999999999996e-44 80116000.0 14776.9 14397.8 14086.0 13576.1 17505.3 13364.3 14768.6 15101.9 14424.6 15676.6 15714.7 True False 16277.04000982117 15611.153135083487 15041.960665999068 14414.664863439839 16275.788118006547 13255.465571719544 15330.627154688009 14800.680757288636 13818.384224897705 14686.776800614716 13781.891523690923 1.1810454306537759 1.1327293578133366 1.0914293324789344 1.045913388496868 1.180954594659858 0.961803069552067 1.1123746786378943 1.073922308258371 1.002647873199702 1.0656575532733155 1.0 13.750486286791501 -2.0000000000000004 0.1649201512948677 0.9762114064539538 1.744083482856399 0.3216823688240006 0.056642688587953495 31.226149099888563 0.31103378981411633 0.06624808900222724 5.927747331349966 0.00999999999999999 2.0000000000000004 0.7678720764024451 ESTS(ph)FEEDQVIEYR ddPTM_A549_MK2206_60min_R1 1 ESTSFEEDQVIEYR 14 0 Q5JSG7;A0A669KA35;Q92824 Q5JSG7 PCSK5 Proprotein convertase subtilisin/kexin type 5 1 ES(0.005)T(0.062)S(0.926)FEEDQVIEY(0.006)R 46.606 0.033275 1476700.0 317.48 471.64 335.61 288.72 401.42 406.32 391.26 524.41 620.47 321.71 384.46 True False 371.062862359226 495.644461462682 383.2045445297489 359.4564129611334 342.37164975785845 449.3165127066126 462.34687744852744 598.7467234382701 479.9345356869889 249.0354875627014 288.98797144379563 1.284007983119093 1.7151041234914455 1.3260224728913228 1.2438455869470089 1.184726298632278 1.5547931301839626 1.5998827741467012 2.07187420447608 1.6607422561195766 0.8617503570079751 1.0 8.174865634405407 -10.803390618195023 1.134791136126436 1.0096099734524182 1.524572965138408 0.4389652265881284 0.24955062359691282 0.42716810380011566 1.0043936784752667 0.16558318336934183 0.04459600081735302 1.5725678109555988e-11 10.803390618195023 0.5149629916859897 ESTS(ph)FEEDQVIEYR ddPTM_A549_PD325901_60min_R1 1 ESTSFEEDQVIEYR 14 0 Q5JSG7;A0A669KA35;Q92824 Q5JSG7 PCSK5 Proprotein convertase subtilisin/kexin type 5 1 ES(0.009)T(0.043)S(0.948)FEEDQVIEYR 75.589 0.00084584 1338500.0 406.32 385.23 270.53 473.93 574.07 408.09 442.54 380.9 260.03 426.05 360.28 True False 447.56930728302524 417.6946840648027 288.88979262904496 503.2035797268757 533.7493036339863 404.7666503418082 459.38110186718 373.30265068973057 249.10184337868307 399.1491302898522 315.9678440030903 1.4165027099360397 1.3219531417276673 0.9143012433449382 1.5925784515020274 1.6892519721999495 1.2810374790475496 1.4538856107860363 1.1814577267112014 0.7883771975740884 1.2632587076992188 1.0 8.303633932804274 -8.559681307620242 4.2454925064738305 0.9009720208782086 1.3751071486460436 0.3132808240914544 0.2202128441492179 0.12038204820128547 4.854331617544475 0.03447011547258307 0.03970205045209224 2.7562505430563933e-09 8.559681307620242 0.47413512776783495 ESTSSKS(ph)PPR ddPTM_A549_MK2206_60min_R1 8 ESTSSKSPPR 10 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 ESTSSKS(1)PPR;ESTS(0.003)S(0.005)KS(0.992)PPR;ESTSSKS(1)PPR;ESTS(0.004)S(0.004)KS(0.991)PPR;ESTSS(0.003)KS(0.997)PPR;ESTSS(0.001)KS(0.999)PPR;ESTSS(0.001)KS(0.999)PPR;ESTS(0.006)S(0.123)KS(0.87)PPR 184.44 4.0625e-14 2968648000.0 67920.4 74748.1 71069.09999999999 57274.100000000006 73300.1 61484.600000000006 57878.7 60378.1 78571.90000000001 103851.5 99288.5 True False 79383.7030256505 78552.45901505121 81147.76703804758 71306.25707113203 62517.75239005529 67990.85956182564 68394.51059597208 68936.88057517623 60775.49010354164 80391.374022001 74632.4252268046 1.0636623797820717 1.0525245397872816 1.0872990766606223 0.9554326668929156 0.8376754768462453 0.9110096496958857 0.9164181706292437 0.9236853869572125 0.8143309013320638 1.0771641652766235 1.0 16.187514947702198 -6.400752659684341 4.180523113739081 0.9069008695342998 1.0655256092827836 0.43100462485981106 0.06901856985611639 0.14183143600536988 4.140417716276801 0.009592262979980306 0.023112329491753493 3.974178232720754e-07 6.400752659684341 0.1586247397484838 ESTSSKS(ph)PPR ddPTM_A549_PD325901_60min_R1 4 ESTSSKSPPR 10 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 ESTSSKS(1)PPR;ESTSSKS(1)PPR;ESTSS(0.005)KS(0.995)PPR;ESTSSKS(1)PPR 196.02 2.5995999999999994e-19 4768630000.0 48153.0 50764.0 50928.0 49195.2 60175.0 51000.0 51895.0 54385.0 55546.0 55125.0 57966.0 True False 53041.45711163494 55042.060436273496 54384.28033494255 52233.87577359445 55948.51559248025 50584.67290899609 53869.89262303363 53300.24851079286 53211.59478641822 51644.39809230867 50836.54947674903 1.043372488053981 1.0827261291887627 1.0697870114063532 1.0274866471314013 1.1005569057764093 0.9950453645980017 1.0596685490558708 1.0484631443204193 1.0467192469613906 1.0158910985083502 1.0 15.633578490503629 -14.999999999999996 0.15591258311637252 0.7944620586439185 1.0695642861261145 0.31251634346128343 0.026254407019061714 41.12287997885263 0.4170746024986656 2.577737334509117 0.04060013353460859 1.0000000000000082e-15 14.999999999999996 0.27510222748219604 ESTSSKS(ph)PPRK ddPTM_A549_MK2206_60min_R1 2 ESTSSKSPPRK 11 2 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 ESTSSKS(1)PPRK;ESTSS(0.001)KS(0.999)PPRK 113.54 5.4617e-06 1229220000.0 24534.8 24987.7 24433.1 16033.2 22066.3 19114.4 20182.0 20932.4 23541.4 31317.0 31503.0 True False 28675.67442173091 26259.467198903956 27898.08097777124 19961.334719757688 18820.37650105085 21137.073120888177 23848.80815996059 23899.63180278644 18209.310487890914 24242.467949398895 23679.935661431347 1.2109692708513715 1.108933215628369 1.1781316206534374 0.8429640605936981 0.7947815724729567 0.8926153104087672 1.0071314593478518 1.0092777338796963 0.7689763497773896 1.0237556510292285 1.0 14.531377540708034 -6.256694814623003 24.670959343075314 0.8961730484995842 1.1603035757522087 0.601125728462288 0.08892727280171502 182.74562510528182 950241.0732353727 0.01415051655196186 0.03614169445673262 5.537390934601409e-07 6.256694814623003 0.2641305272526244 ESTSSKS(ph)PPRK ddPTM_A549_PD325901_60min_R1 6 ESTSSKSPPRK 11 2 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 EST(0.001)S(0.002)S(0.014)KS(0.983)PPRK;EST(0.001)S(0.004)S(0.003)KS(0.992)PPRK;ESTS(0.025)S(0.222)KS(0.753)PPRK;ES(0.001)T(0.005)S(0.027)S(0.165)KS(0.803)PPRK;ESTS(0.001)S(0.025)KS(0.974)PPRK;ESTSS(0.002)KS(0.998)PPRK 102.73 4.6246000000000004e-05 2447740000.0 58209.700000000004 58069.1 61978.4 62313.6 73335.1 57910.299999999996 54557.8 55893.2 64701.2 70460.6 69710.79999999999 True False 64119.10589228372 62962.78685052419 66184.62693039597 66162.5695475464 68184.29556836053 57438.69771689878 56634.02693417372 54778.36627863285 61982.033568483836 66011.70569111883 61136.81353317036 1.0487806312884673 1.0298670017593103 1.0825658568954837 1.0822050696451373 1.1152739507983433 0.9395108183997006 0.9263490139774195 0.8959964236427259 1.0138250586915998 1.0797374262121717 1.0 15.899753740088169 -7.260442318676422 24.99983803552627 0.9865992763840414 1.0705953029551727 0.46465462915203803 0.050507220737916636 71.19882435184095 1785178.5168446742 0.007302635081352361 0.012205716800407553 5.4898146437291764e-08 7.260442318676422 0.08399602657113125 ESTTSEQSAR ddPTM_A549_PD325901_60min_R1 2 ESTTSEQSAR 10 0 P36542-2;P36542 P36542-2 ATP5C1 ATP synthase subunit gamma, mitochondrial 0 ; 166.33 4.7648999999999995e-09 6005800.0 1622.27 1517.84 1619.42 1619.25 1888.79 1307.31 1327.06 980.6 1668.1799999999998 2065.9 1865.52 False True 1786.9616561479468 1645.7537036599424 1729.3235795635526 1719.2673949164298 1756.1279063717616 1296.6637007972495 1377.5619944950965 961.0411637341816 1598.0721958522145 1935.4587214312992 1636.0728665056222 1.0922262038148691 1.0059171185785856 1.056996674761252 1.0508501363930673 1.0733800078981548 0.7925464246385958 0.8419930570924622 0.587407311378988 0.9767732407086668 1.182990538535802 1.0 10.676021288323957 -7.192046640801625 24.999836402177305 0.930773413461808 1.0528820501171792 0.2200898978050172 0.14129456219654624 250.57398981748236 90272.74082351987 0.020186667742999452 0.03496433267444969 6.426186999519885e-08 7.192046640801625 0.1221086366553712 ESVAS(ph)GDDR ddPTM_A549_MK2206_60min_R1 2 ESVASGDDR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESVAS(1)GDDR;ES(0.001)VAS(0.999)GDDR 125.7 7.0787e-05 26642000.0 2275.91 2738.87 2319.4300000000003 2386.23 4107.6 2255.08 1972.79 2666.59 3705.3 4040.5 4320.0 True False 2660.0279673427794 2878.266784340376 2648.3600510075257 2970.856457121936 3503.3774813048162 2493.711068799047 2331.2204067926195 3044.587298589377 2866.05546614824 3127.748243750878 3247.2247740654366 0.8191696455963217 0.8863774406158108 0.8155764492064562 0.9148909188083413 1.0788835775352512 0.767951479280256 0.7179116226912728 0.9375967204073887 0.8826169007573865 0.9632065721878017 1.0 11.664991536611577 -10.359084899033514 0.675210406446447 1.0032361000567012 0.8681888537954577 0.18539496238812547 0.09072678049579634 0.9626153336804297 0.779988151823811 0.06941015961216265 0.01940763291058915 4.3743658352501435e-11 10.359084899033514 -0.13504724626124343 ESVAS(ph)GDDR ddPTM_A549_PD325901_60min_R1 2 ESVASGDDR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESVAS(1)GDDR;ESVAS(1)GDDR 115.7 0.00020144 71351000.0 3324.2 3446.1 3207.8 2832.7 3456.6000000000004 2757.2 2759.7 2424.6 2087.9 2079.42 2314.5 True False 3661.670336853302 3736.514941089004 3425.5005980684223 3007.6694454715284 3213.820340622639 2734.7462773467455 2864.721893665784 2376.239450938095 2000.1528238678331 1948.1250663239637 2029.8311728243382 1.8039285167536363 1.8408008464516583 1.6875790676237021 1.4817337942872417 1.5832944057859157 1.3472777016925883 1.4113104242456609 1.170658664992202 0.9853789076875737 0.959747338796316 1.0 10.987144023768165 -7.426563782806536 0.5094776127914149 0.9664533847020969 1.8494871536272481 0.9388211070618685 0.07678832254384847 0.16744134018644943 0.0834759378458758 0.02153187276373519 0.060836854812085214 3.7448654390375736e-08 7.426563782806536 0.8830337689251513 up ESVAS(ph)GDDRAEEDMDEAIEK ddPTM_A549_MK2206_60min_R1 2 ESVASGDDRAEEDMDEAIEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.001)VAS(0.999)GDDRAEEDMDEAIEK;ES(0.018)VAS(0.982)GDDRAEEDMDEAIEK 158.2 2.3640999999999997e-27 58048000.0 3256.1 2862.2 2714.2 2285.8999999999996 4813.6 4884.7 4382.6 4115.4 5346.1 4172.2 4301.0 True False 3805.650075998094 3007.873754555357 3099.114373119527 2845.945602617951 4105.525816537363 5401.595711798563 5178.861690706736 4698.770552883918 4135.216885967429 3229.6971222812554 3232.9429984387575 1.177147285874173 0.9303825511331038 0.9586047061813776 0.8802956328003018 1.269903558002721 1.6707983142316718 1.6019031864179776 1.453403464011903 1.2790874716827345 0.9989959995709576 1.0 11.658632355505395 -6.77168652819338 24.847019860405762 1.2449558835148937 0.9805912684492843 0.3189333319648272 0.21871284981653405 249.18735584085368 604224.1101265374 0.0380051073918497 0.0724022368062357 1.6916615247722772e-07 6.77168652819338 -0.2643646150656094 ESVAS(ph)GDDRAEEDMDEAIEK ddPTM_A549_PD325901_60min_R1 6 ESVASGDDRAEEDMDEAIEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.146)VAS(0.854)GDDRAEEDMDEAIEK;ES(0.034)VAS(0.966)GDDRAEEDMDEAIEK;ESVAS(1)GDDRAEEDMDEAIEK;ES(0.179)VAS(0.821)GDDRAEEDMDEAIEK;ES(0.002)VAS(0.998)GDDRAEEDMDEAIEK;ES(0.017)VAS(0.983)GDDRAEEDMDEAIEK 193.5 2.0883e-45 242411900.0 16939.34 18385.13 17180.689999999995 18576.66 18235.320000000003 16583.79 15913.69 16085.4 15010.779999999999 13238.21 13372.230000000001 True False 18659.00932671698 19934.509427719335 18346.674939281787 19724.098097544076 16954.534031638846 16448.737112578063 16519.294181255304 15764.56407824782 14379.929117993564 12402.34716135295 11727.530483550148 1.591043344793638 1.6998045288120007 1.5644107653368382 1.6818628717452895 1.445703684626568 1.4025746627263265 1.4085910247196898 1.3442356087123626 1.2261685559601705 1.0575412426980553 1.0 13.5176116304076 -8.272259701754717 0.29969904330696673 0.961738701351628 1.7397965709359282 0.9335752900569512 0.05739857006938871 0.22105945551312745 0.05835141699181151 0.04379139408525203 0.06077880002490082 5.342447932780112e-09 8.272259701754717 0.7780578695843002 ESVASGDDRAEEDMDEAIEKGEAEQS(ph)EEEADEEDKAEDAR ddPTM_A549_MK2206_60min_R1 1 ESVASGDDRAEEDMDEAIEKGEAEQSEEEADEEDKAEDAR 40 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESVASGDDRAEEDMDEAIEKGEAEQS(1)EEEADEEDKAEDAR 83.59 4.0164e-07 14020000.0 384.22 676.68 621.51 594.36 1572.1 1190.2 694.07 950.52 1145.9 905.72 1203.3 True False 449.0669427228854 711.1201216660324 709.6494635758298 739.9782266818339 1340.8461725482778 1316.1461740091815 820.1735348123996 1085.2591208454148 886.3554796262835 701.1172229501414 904.4874006094757 0.4964877812784215 0.7862134079334377 0.7845874504140609 0.8181188883153158 1.482437645504811 1.455129361804615 0.9067827083713246 1.1998609600466836 0.9799533736224803 0.7751542171595798 1.0 9.820956596209047 -6.538358201443934 24.99888402404216 1.0672985759759424 0.7158987010726289 0.4264999337851787 0.21771569409627173 192.34705767260908 310634.37299593206 0.03059320851004013 0.06370047300818997 2.8949548749248023e-07 6.538358201443934 -0.3513998749033135 ESVASGDDRAEEDMDEAIEKGEAEQS(ph)EEEADEEDKAEDAR ddPTM_A549_PD325901_60min_R1 4 ESVASGDDRAEEDMDEAIEKGEAEQSEEEADEEDKAEDAR 40 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESVASGDDRAEEDMDEAIEKGEAEQS(0.999)EEEADEEDKAEDAR;ESVASGDDRAEEDMDEAIEKGEAEQS(1)EEEADEEDKAEDAR;ESVASGDDRAEEDMDEAIEKGEAEQS(1)EEEADEEDKAEDAR;ESVASGDDRAEEDMDEAIEKGEAEQS(1)EEEADEEDKAEDAR 83.531 3.5141e-07 82161000.0 2548.59 2002.8199999999997 2088.05 2330.75 2282.0699999999997 1671.58 2013.16 1986.0 1823.08 2290.74 2171.57 True False 2807.3209806272043 2171.6046702973995 2229.75762946467 2474.715133982691 2121.7852759141074 1657.9672066905823 2089.7719054434224 1946.3876720131393 1746.462287531476 2146.1022854598664 1904.4806567164192 1.474061167661006 1.1402608173724054 1.1707956295597521 1.2994173110948959 1.1141017728015945 0.8705613264401124 1.0972922712937763 1.0220044321001263 0.9170281049441646 1.126870088121575 1.0 10.895181919583022 -4.72822081432248 0.36869492558418204 0.9566270573718234 1.9153282328839676 0.5484119324282759 0.10870917257949372 3.674710240970498 0.25244836945680543 0.025952508776280022 1.6917222420096216 1.869731245449785e-05 4.72822081432248 0.9587011755121442 ESVASMGADS(ph)GDDFASDGSSSR ddPTM_A549_MK2206_60min_R1 4 ESVASMGADSGDDFASDGSSSR 22 0 Q5T165;Q92805 Q5T165 GOLGA1 Golgin subfamily A member 1 1 ESVASMGADS(1)GDDFASDGSSSR;ESVAS(0.005)MGADS(0.995)GDDFASDGSSSR;ESVASMGADS(1)GDDFASDGSSSR;ESVASMGADS(1)GDDFASDGSSSR 162.76 6.036399999999999e-33 19226800.0 2554.63 2290.2200000000003 1895.47 1885.0199999999998 2777.43 2026.08 1795.1 2251.5 3045.04 3594.38 3284.45 True False 2985.789089293024 2406.782415679466 2164.2761479687833 2346.849984621764 2368.873726239273 2240.4784407969437 2121.246433849235 2570.657019929569 2355.3433019296785 2782.407061594673 2468.830418791486 1.2093941595043185 0.9748674503361016 0.8766402631365079 0.9505918133374943 0.959512532010545 0.907506009219409 0.8592110732691003 1.0412448746430822 0.954032032334825 1.1270142495071354 1.0 11.269612027432428 -5.265325528940822 5.392874485076724 0.9602195923625476 1.2185349733814514 0.49154489656168254 0.07140890719966898 0.06806408358496761 7.258546691446318 0.007205734467209115 0.06461712393516851 5.428432863845173e-06 5.265325528940822 0.25831538101890383 ESVASMGADS(ph)GDDFASDGSSSR ddPTM_A549_PD325901_60min_R1 4 ESVASMGADSGDDFASDGSSSR 22 0 Q5T165;Q92805 Q5T165 GOLGA1 Golgin subfamily A member 1 1 ESVASMGADS(1)GDDFASDGSSSR;ESVAS(0.003)MGADS(0.997)GDDFASDGSSSR;ESVASMGADS(1)GDDFASDGSSSR;ESVASMGADS(1)GDDFASDGSSSR 196.31 2.6313999999999996e-60 22615300.0 2313.8 2637.12 2835.9100000000003 3173.7200000000003 2852.39 3192.1099999999997 2939.19 2612.35 2609.88 3098.8 3356.7899999999995 True False 2548.695272670466 2859.359357373443 3028.3719063121835 3369.753476358916 2652.0479666112965 3166.1145145006953 3051.04248383648 2560.2446299010694 2500.195819702179 2903.141239155485 2943.9261104450266 0.8657470252489405 0.9712741590994619 1.0286847538623827 1.1446460780394785 0.9008541203537179 1.075473498899088 1.0363855509183486 0.8696701390762974 0.8492726127980944 0.9861460954659028 1.0 11.523525746331368 -8.251408763752874 24.774177591427392 0.9223979358192398 1.007312622210583 0.16472588885009998 0.08295389427132684 857.6839601206455 2118357.691032379 0.014396543615346548 0.018472455863443798 5.6052015863541695e-09 8.251408763752874 0.08491468639134325 ESVDLPEEKLPISDS(ph)PPDTQEIHVIEQEK ddPTM_A549_MK2206_60min_R1 1 ESVDLPEEKLPISDSPPDTQEIHVIEQEK 29 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ESVDLPEEKLPIS(0.152)DS(0.823)PPDT(0.025)QEIHVIEQEK 73.34100000000001 5.3493e-06 4800000.0 628.92 645.86 552.53 609.79 1084.6 1066.5 850.88 584.93 1220.5 792.46 1014.1 True False 735.0663203822736 678.7315153088961 630.8870623313431 759.188577374513 925.0567767609322 1179.3563221145962 1005.473882030882 667.8456187729963 944.0586987380041 613.4427356126272 762.2709822638325 0.9643110356886929 0.8904071269946069 0.8276414516760189 0.9959562872508079 1.2135537076508538 1.5471615075941652 1.3190504498082463 0.8761262520968505 1.2384817482285484 0.8047567727041015 1.0 9.57416014716633 -6.569422771504198 4.6692547944862435 1.1514967275492822 0.8953367866474182 0.2392175225693033 0.19652154520366596 0.20309238817871955 9.743080704640667 0.026743097517150056 0.057969007914378735 2.695114548979205e-07 6.569422771504198 -0.256159940901864 ESVDLPEEKLPISDS(ph)PPDTQEIHVIEQEK ddPTM_A549_PD325901_60min_R1 2 ESVDLPEEKLPISDSPPDTQEIHVIEQEK 29 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ESVDLPEEKLPIS(0.087)DS(0.88)PPDT(0.032)QEIHVIEQEK;ESVDLPEEKLPIS(0.121)DS(0.767)PPDT(0.113)QEIHVIEQEK 89.57700000000001 1.2565000000000002e-09 18405800.0 2345.72 2493.79 2178.12 2397.46 3117.2200000000003 2908.06 2318.72 2426.62 2368.6800000000003 2596.81 2581.64 True False 2583.855767572205 2703.950435256767 2325.94032129958 2545.545659173287 2898.2772210251965 2884.377723524221 2406.9601584522698 2378.2191604534373 2269.1326169065837 2432.8469734256328 2264.114646364323 1.1412212591448567 1.194263921042481 1.0273067775231857 1.1243006900118246 1.280092960698435 1.273953917552676 1.0630911125977325 1.0503969683126875 1.00221630585285 1.0745246391706609 1.0 11.144731297405018 -7.964127471190693 5.990697489103842 1.006938153402024 1.170909847355385 0.4745693598525561 0.06967001447720815 0.10565416733089081 10.405994838122705 0.011126480215491886 0.015331023886317028 1.0861067900799785e-08 7.964127471190693 0.16397169395336086 ESVDLPEEKLPISDS(ph)PPDTQEIHVIEQEKLEAQDSGEEAR ddPTM_A549_PD325901_60min_R1 2 ESVDLPEEKLPISDSPPDTQEIHVIEQEKLEAQDSGEEAR 40 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ESVDLPEEKLPIS(0.013)DS(0.978)PPDT(0.009)QEIHVIEQEKLEAQDSGEEAR;ESVDLPEEKLPIS(0.048)DS(0.91)PPDT(0.042)QEIHVIEQEKLEAQDSGEEAR 139.64 3.6774e-31 73413000.0 1339.22 2047.37 1666.7 1426.37 1784.8400000000001 1765.02 1721.1 1892.58 1692.52 1754.24 1937.0099999999998 True False 1475.176628518344 2219.909055145639 1779.8122846812896 1514.4736353786936 1659.4789957637292 1750.6462623105167 1786.5974023220565 1854.8310071997125 1621.389270296846 1643.4769870195294 1698.7700497180706 0.8683792304692243 1.3067743073961404 1.0477064185212523 0.8915118533141299 0.9768708813998327 1.030537513067796 1.051700553949937 1.0918670290352375 0.9544489382573782 0.9674511198806939 1.0 10.730274863150344 -5.998788526355155 24.997957775139554 0.9896161797473978 1.1099926442781787 0.09637120067142357 0.10647538164623054 48.90152910991703 1008943.145894843 0.013065907204402288 0.04017944095594718 1.0027934154895799e-06 5.998788526355155 0.12037646453078088 ESVDS(ph)RDS(ph)SHSR ddPTM_A549_PD325901_60min_R1 1 ESVDSRDSSHSR 12 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 ES(0.136)VDS(0.863)RDS(0.813)S(0.152)HS(0.036)R 43.297 0.021381 4909300.0 672.07 585.75 599.48 599.95 607.14 429.21 668.67 493.29 489.56 736.77 579.01 True False 740.2980516482156 635.1132081898038 640.164317766088 637.0075489146908 564.4965809192931 425.71465606412215 694.116602760264 483.45094397148154 468.98549569075897 690.2502164620449 507.7954406468008 1.4578666769935278 1.2507264881717586 1.2606736227302144 1.2544570075369463 1.1116613812055296 0.8383585632865691 1.3669216916877749 0.9520584575467818 0.9235716947229619 1.3593076290382673 1.0 8.988103631263137 -5.715269756694378 0.4014145741311405 0.9615373149302177 1.6337170755854007 0.19823540296883035 0.17684207685609363 2.0754149028299818 0.2835599743881638 0.032546322716328915 0.624378733195668 1.9263280264706127e-06 5.715269756694378 0.672179760655183 ESVGGS(ph)PQTK ddPTM_A549_MK2206_60min_R1 2 ESVGGSPQTK 10 0 Q08495-2;Q08495;Q08495-3;Q08495-4;E5RGQ0;E5RFK4;E5RGQ7;E5RJC0 Q08495-2 DMTN Dematin 1 ESVGGS(0.869)PQT(0.131)K;ESVGGS(1)PQTK 171.62 1.6850999999999997e-10 99569000.0 8883.900000000001 10226.6 11491.0 10698.8 17746.3 15583.7 16005.5 15965.1 23254.3 21670.1 23698.6 True False 10383.285129498323 10747.090258659711 13120.596588872038 13320.006480287379 15135.84277838146 17232.756790377145 18913.49217145225 18228.2018160682 17987.238179486416 16774.809359461928 17813.583571913685 0.5828858122556226 0.6033087174893002 0.7365500903231519 0.7477443506251467 0.8496798365852583 0.9673941641673763 1.0617454986021324 1.0232753978154197 1.009748437582572 0.9416863985700457 1.0 14.120690153224643 -6.640400415948394 0.941118890626485 1.01237744062671 0.5903786888007035 0.9435931813216921 0.03908114769414129 0.08478945107436678 0.13718716195465877 0.005668008358943508 0.022164942174233437 2.28875646498977e-07 6.640400415948394 -0.42199875182600655 down ESVGGS(ph)PQTK ddPTM_A549_PD325901_60min_R1 1 ESVGGSPQTK 10 0 Q08495-2;Q08495;Q08495-3;Q08495-4;E5RGQ0;E5RFK4;E5RGQ7;E5RJC0 Q08495-2 DMTN Dematin 1 ESVGGS(0.994)PQT(0.006)K 171.26 1.7504e-10 76264000.0 16484.0 15545.0 17213.0 17763.0 21177.0 17080.0 17568.0 18048.0 18226.0 17637.0 19334.0 True False 18157.443545120583 16855.03170518225 18381.17769017763 18860.180167300026 19689.60057668392 16940.906142855943 18236.559853578474 17688.0184816179 17460.024602622314 16523.396810050745 16956.040568323955 1.0708539810314561 0.9940428980023553 1.0840489332465983 1.112298598915436 1.1612145239535816 0.9991074316313984 1.0755199470120809 1.0431691532197305 1.0297229787972946 0.9744843876416854 1.0 14.04951170279193 -8.775010717159631 0.7611201931759225 1.0071728773777036 1.0741384121113842 0.3241914140601039 0.04494101213665146 0.5620218784447949 0.6765904275982333 0.011737147005660704 0.011897945677450918 1.678762590498201e-09 8.775010717159631 0.06696553473368061 ESVKGS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ESVKGSPK 8 1 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.022)VKGS(0.978)PK 50.354 0.0087758 20835000.0 9766.5 11060.0 8416.8 8110.0 9202.1 7593.9 6661.2 6581.6 8060.1 11107.0 11789.0 True False 10757.987890282699 11992.065015073376 8988.014662330037 8610.936280853635 8555.776241521604 7532.057796149524 6914.6956111485 6450.324824834683 7721.36202675277 10405.702124467525 10339.027736628268 1.0405222003777175 1.1598832424628152 0.8693288084031372 0.8328574504493792 0.8275223221629336 0.7285073594943131 0.6687955373842046 0.6238811800439412 0.7468170338104574 1.0064488063614578 1.0 13.335812903162115 -5.8400066736792 5.466812227835975 0.8284063709158866 1.0991841277805308 0.46838356227840805 0.11791097695084186 0.15304889050822088 7.721094117993398 0.01937738147143904 0.06340824137588547 1.4454175592566758e-06 5.8400066736792 0.2707777568646441 ESVPEFPLS(ph)PPK ddPTM_A549_MK2206_60min_R1 5 ESVPEFPLSPPK 12 0 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK 203.88 6.6136e-25 367839000.0 59819.700000000004 62021.4 54879.299999999996 50355.5 73253.3 62008.2 53153.9 70194.8 82298.9 77878.79999999999 78965.6 True False 69915.80290875075 65178.02434518187 62662.00995384955 62692.59976054432 62477.836608059755 68569.86656628808 62811.27559477403 80145.1278625593 63658.33055433766 60285.92499082437 59356.262180310485 1.177901039259562 1.0980816842405983 1.0556933279170608 1.0562086873007404 1.052590481830993 1.1552254816516043 1.05820806916662 1.350238793997794 1.0724787615661933 1.0156624217288108 1.0 15.857112624073576 -9.44618038392901 2.039089974995113 1.0217820705348442 1.1186289454576592 0.20876404689395223 0.08373702273189577 0.3393262749653481 2.8565476325419725 0.0181645170553616 0.015408091522969531 3.579477328659389e-10 9.44618038392901 0.09684687492281507 ESVPEFPLS(ph)PPK ddPTM_A549_PD325901_60min_R1 4 ESVPEFPLSPPK 12 0 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK 232.5 8.589700000000001e-41 559786900.0 70334.90000000001 73982.5 69698.04 67893.33 85622.48 68393.91 66824.31 70881.83 67300.88 74209.18 78012.05000000002 True False 77475.24727018333 80217.26491660638 74428.16812276245 72086.94679716011 79608.65238632032 67836.93267288861 69367.34568471553 69468.03629493022 64472.45805871462 69523.59971018216 68417.06240912982 1.132396576849297 1.17247455666705 1.087859745828995 1.053639900030852 1.1635789316744627 0.9915206862760042 1.0138895655867695 1.0153612834107908 0.9423447278863464 1.0161734114574419 1.0 16.062068540674222 -7.398293058994746 1.0319825564052165 0.9743101473507583 1.1282978073568233 0.6520816387686721 0.04251712975415025 0.20149292898578888 0.4263795259099628 0.007236100273296229 0.01501034276163009 3.996749607706544e-08 7.398293058994746 0.153987660006065 ESVPEFPLS(ph)PPKK ddPTM_A549_MK2206_60min_R1 2 ESVPEFPLSPPKK 13 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPKK;ESVPEFPLS(1)PPKK 110.97 2.0084e-05 16778300.0 4426.5 5101.3 4552.3 4142.3 6188.0 6082.6 5076.5 6363.0 7499.3 6904.799999999999 6456.7 True False 5173.5849824653915 5360.934380585998 5197.884592422087 5157.163685954915 5277.753397194032 6726.256694696897 5998.834338719651 7264.974735870239 5800.720523921279 5345.000884408135 4853.323194145437 1.0659881436921996 1.104590435488181 1.0709949419177964 1.062604627727245 1.0874514607971266 1.3859074340671933 1.2360261410070617 1.4969072623545814 1.1952059015807328 1.1013074280434916 1.0 12.24475722040102 -7.034681423907349 24.992571606169975 1.1615304140300713 1.0773858429940906 0.1473685008443033 0.13495943409249306 1557.943284569276 1122702.581734694 0.024439658272860192 0.04234432496512552 9.232484263739674e-08 7.034681423907349 -0.08414457103598072 ESVPEFPLS(ph)PPKK ddPTM_A549_PD325901_60min_R1 2 ESVPEFPLSPPKK 13 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPKK;ESVPEFPLS(1)PPKK 87.932 8.0535e-05 26901000.0 7294.6 7572.2 8111.900000000001 7549.4 8719.8 7490.200000000001 7635.8 8338.7 7876.0 7849.200000000001 10060.5 True False 8035.142421999308 8210.33586863821 8662.42231481739 8015.709292068614 8107.351329676934 7429.2022945678955 7926.384547470086 8172.3780869164 7544.999109527773 7353.600172447151 8823.122278763994 0.9106914953835286 0.9305476688676667 0.9817864970166642 0.9084889723631384 0.9188755492134775 0.8420151120934743 0.898365034172514 0.9262455884337177 0.8551393566977438 0.833446476214687 1.0 13.107073563912197 -11.013555340821629 1.3027584421243927 0.9999149993154121 0.9035887724143115 0.0 0.060321534082024536 0.3297511854215351 0.9980529442708347 0.027864200942489103 0.006337510570748854 9.692697503416987e-12 11.013555340821629 -0.0963262269011006 ESVPEFPLS(ph)PPKKK ddPTM_A549_MK2206_60min_R1 2 ESVPEFPLSPPKKK 14 2 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPKKK;ES(0.005)VPEFPLS(0.995)PPKKK 82.81299999999999 7.2607e-05 49375000.0 6468.0 7167.9 6776.4 6622.5 10277.3 8636.7 8140.0 7661.400000000001 12337.9 10430.0 10760.8 True False 7559.640272582439 7532.715493423712 7737.3954159631385 8245.012797295325 8765.52278425698 9550.629861422527 9618.932634133345 8747.426912053475 9543.385349577733 8073.8557560504005 8088.596377028548 0.9346047101635169 0.9312759769811823 0.9565807286338562 1.0193378941136186 1.0836889833137044 1.1807524341981168 1.1891967636623484 1.0814517753532606 1.1798567890815712 0.9981776045816787 1.0 12.98167365658925 -6.495224029951316 2.0833426618847506 1.1020840416914843 0.9363339352925135 0.5720856196618416 0.061656110511641014 0.21954162456407322 1.8758460438022957 0.011046955552082592 0.029692163082091244 3.197245391501288e-07 6.495224029951316 -0.1657501063989708 ESVPEFPLS(ph)PPKKK ddPTM_A549_PD325901_60min_R1 3 ESVPEFPLSPPKKK 14 2 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPKKK;ESVPEFPLS(1)PPKKK;ESVPEFPLS(1)PPKKK 110.56 2.2413e-06 63252100.0 13379.3 15063.000000000002 15633.599999999999 14939.900000000001 16924.8 19079.9 18024.0 19935.899999999998 17585.5 17088.6 18909.2 True False 14737.556686679909 16332.411873603098 16694.59010847387 15862.703692025307 15736.06043539028 18924.519620320683 18709.91318311125 19538.262835089 16846.442590223556 16009.622879641282 16583.48827529488 0.8886885824036833 0.9848598559287541 1.0066995454354741 0.9565360091131516 0.9488993011701254 1.1411664003473465 1.1282254295668417 1.1781756956524023 1.015856393453747 0.9653953748374816 1.0 14.017459883858768 -4.480272704079152 0.6830451545735745 1.0336214534501054 0.5897102363310435 0.28495897255500446 0.07325208838236552 8.804375188436596 1.3294733459720258 0.012877169484742131 3.8963016795841425 3.309232614562281e-05 4.480272704079152 -0.4439112171190619 ESVS(ph)PEDSEK ddPTM_A549_MK2206_60min_R1 2 ESVSPEDSEK 10 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 ESVS(1)PEDSEK;ES(0.002)VS(0.998)PEDSEK 176.78 7.475799999999999e-11 216780000.0 4808.4 4862.7 5203.0 3843.8999999999996 5728.1 3830.7000000000003 3947.8999999999996 5361.3 6355.4 5886.0 7132.299999999999 True False 5619.94036590683 5110.1906597289935 5940.863636924654 4785.655672559225 4885.504077968189 4236.06213138714 4665.182327554674 6121.280693292648 4915.9120474883375 4556.348511995463 5361.153068534001 1.0482708279477635 0.9531887253363514 1.1081316949879914 0.8926541755816451 0.9112786028517784 0.7901401204620864 0.8701826394280439 1.1417843540450343 0.9169505113258379 0.8498821902209536 1.0 12.388327611343017 -6.272790720235212 24.903862270181374 0.9470824048597816 1.02819625212452 0.1924229045350273 0.09451913349561016 1061.4077062808285 2328636.6492427764 0.012998242864133324 0.030431327347569117 5.335919632227877e-07 6.272790720235212 0.08111384726473847 ESVS(ph)PEDSEK ddPTM_A549_PD325901_60min_R1 2 ESVSPEDSEK 10 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 ESVS(0.917)PEDS(0.083)EK;ESVS(0.999)PEDS(0.001)EK 196.67 2.9581e-19 293780000.0 10210.3 10079.7 9295.7 9070.599999999999 11618.8 9632.1 8593.1 9227.6 10357.4 9743.2 10217.1 True False 11246.842139574406 10929.151693710231 9926.562101585092 9630.870361172754 10802.735570683997 9553.659371112573 8920.115122824744 9043.548279087845 9922.114496828719 9128.012689215091 8960.46147153318 1.2551632720373735 1.21970857510313 1.107818178016964 1.0748185672991755 1.2056003594238538 1.0662017130997041 0.9954972912012829 1.009272603628577 1.1073218191217773 1.0186989496259997 1.0 13.1293573189035 -2.0000000000028373 0.29341984600021837 1.0356163629024593 2.911127664584729 0.666121055808861 0.05140696578519729 24.347679852887715 0.3041449264524418 0.019955897366867547 24.19443407170264 0.009999999999934669 2.0000000000028373 1.8755113016822698 ESVSTASDQPSHS(ph)LER ddPTM_A549_MK2206_60min_R1 1 ESVSTASDQPSHSLER 16 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ESVSTASDQPS(0.4)HS(0.6)LER 167.97 2.2069e-28 38001000.0 1594.8 1344.0 1277.1 1383.9 1567.6 1130.5 1653.6 1258.7 1930.4 2119.2 2786.8 True False 1863.963250883499 1412.4038593118573 1458.2119836087782 1722.9555621256313 1337.0081165871632 1250.1287596348348 1954.0377154549026 1437.1245796070828 1493.1674822153575 1640.4712481516792 2094.7606482327674 0.8898215900971889 0.6742554861833134 0.6961234377010997 0.8225071268066797 0.6382629527221271 0.5967883541680519 0.9328214739490238 0.6860567009502992 0.7128105463863185 0.7831306405033212 1.0 11.032569692627344 -10.72311625424724 0.7436655039254162 1.0205508613616727 0.732621303117026 0.10142499113502212 0.11745072954298695 0.5233234873297742 0.45516815225149543 0.09258681041116448 0.018266498264292733 1.8918371338742653e-11 10.72311625424724 -0.2879295582446467 ESVSTASDQPSHS(ph)LER ddPTM_A549_PD325901_60min_R1 3 ESVSTASDQPSHSLER 16 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ESVSTASDQPS(0.028)HS(0.972)LER;ESVSTASDQPS(0.005)HS(0.995)LER;ESVSTASDQPSHS(1)LER 203.9 1.1789e-39 117053900.0 4389.96 5526.9 4375.5 5775.6 5908.099999999999 5884.639999999999 5329.0 6293.2 5584.1900000000005 6042.5199999999995 6560.799999999999 True False 4835.625507482257 5992.671259657239 4672.447742018947 6132.345694660697 5493.135437838513 5836.717442886173 5531.798011140694 6167.677189080105 5349.505913843822 5660.994255977084 5753.863192337835 0.8404137091618106 1.0415039529680534 0.8120540210690165 1.0657788497347087 0.954686487011627 1.0143997602617092 0.9614058983027516 1.0719193319183062 0.9297242105039136 0.9838597246308497 1.0 12.49031520367426 -5.241224232664472 23.46030392086268 0.9746957020666757 0.8404134088206936 0.24984536801447121 0.06978171085592784 2086.578022977616 2421451.213483513 0.008584000276209876 0.4311031318828876 5.738201138974688e-06 5.241224232664472 -0.13428229324598207 ESVSTEDLSPPS(ph)PPLPK ddPTM_A549_MK2206_60min_R1 2 ESVSTEDLSPPSPPLPK 17 0 Q13127-4;Q13127 Q13127-4 REST RE1-silencing transcription factor 1 ESVSTEDLS(0.004)PPS(0.996)PPLPK;ESVSTEDLS(0.013)PPS(0.987)PPLPK 142.1 3.4268000000000003e-16 14236000.0 3236.3 3700.5 3893.8999999999996 3275.8 5153.4 3654.6 3151.5 3561.6 5766.4 5902.2 5682.6 True False 3782.5083200616164 3888.8396438865534 4446.113572135481 4078.3711470562507 4395.341686667702 4041.327346272854 3724.086756323248 4066.467706942548 4460.31960704861 4568.888920744072 4271.453588218572 0.885531878537659 0.9104253537045712 1.0408900577542626 0.9547970176487749 1.0290037327786576 0.9461246067192566 0.8718546694724582 0.9520102754150457 1.044215865847393 1.0696332820625465 1.0 12.06051139142868 -8.74847352780972 24.476488889614807 1.0208797125869224 0.950833591945335 0.35566020828197853 0.0520072252632635 172.31388548800436 325287.8502842399 0.008820873131844518 0.009970323329500388 1.7845407609628076e-09 8.74847352780972 -0.07004612064158744 ESVSTEDLSPPS(ph)PPLPK ddPTM_A549_PD325901_60min_R1 1 ESVSTEDLSPPSPPLPK 17 0 Q13127-4;Q13127 Q13127-4 REST RE1-silencing transcription factor 1 ESVSTEDLSPPS(1)PPLPK 168.5 9.8408e-30 7474300.0 4196.5 4987.1 4034.9 4622.5 5245.8 4813.4 4246.3 4827.3 4673.5 5355.1 5893.3 True False 4622.525590699978 5407.380419228975 4308.732577824766 4908.021326540804 4877.3531050275515 4774.201266277686 4407.89527016452 4731.01571455641 4477.089047534036 5016.978072092916 5168.461460706709 0.8943716860119371 1.0462263209929397 0.8336586449530402 0.9496097366409899 0.9436760130858454 0.923718074048459 0.8528447592529417 0.9153624827279867 0.8662324526498185 0.970690815871329 1.0 12.335519169971011 -11.007402073029505 1.3060701675354573 0.9997218374687187 0.9106180759188237 0.19375307866061187 0.055057071507848075 0.4755813474310606 1.4517594179988962 0.03707683507077051 0.00853859148710591 9.831005226104626e-12 11.007402073029505 -0.08910376154989497 ESWVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ESWVSPR 7 0 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 ES(0.001)WVS(0.999)PR;ESWVS(1)PR 86.67 0.013046 24090000.0 2502.45 2259.7599999999998 2149.57 1919.44 3664.8 2553.58 2461.5699999999997 2648.5299999999997 3203.86 3255.27 3729.2 True False 2924.802380971542 2374.7721317846463 2454.411348841848 2389.702886166935 3125.712774731205 2823.7981406707804 2908.8054059218216 3023.967238282948 2478.1908255131034 2519.9022461167983 2803.1367193159294 1.0434033990626412 0.8471838406669582 0.8755945908485037 0.8525102859592636 1.1150768184771225 1.0073708218412882 1.0376965867835655 1.0787797888862551 0.8840777577619814 0.8989580239709996 1.0 11.45282639630643 ESWVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ESWVSPR 7 0 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 ESWVS(1)PR;ESWVS(1)PR 110.41 0.008402600000000001 32041000.0 7808.0 6770.200000000001 5981.7 6187.1 5998.9 7569.7 5802.799999999999 5501.299999999999 8835.400000000001 8435.900000000001 9595.6 True False 8600.662412054202 7340.748514018963 6387.65413288418 6569.263115076395 5577.557959081508 7508.054872926032 6023.628729413997 5391.572255813639 8464.07886393115 7903.255834320303 8415.402031520081 1.0220144420718373 0.8722992064459928 0.75904325294966 0.7806238003212524 0.6627797386495187 0.8921801768714602 0.7157862104332458 0.6406791066688651 1.0057842551346625 0.9391418026992028 1.0 13.038816480165691 -8.791539634989059 24.612200797447464 1.0027315385138713 0.790631013303105 0.38788048489650684 0.10449526986597546 106.29114869940399 86911.02416179418 0.017678995278605447 0.01882201666600503 1.6160707320182236e-09 8.791539634989059 -0.21210052521076628 ESYDAPPT(ph)PSGAR ddPTM_A549_MK2206_60min_R1 2 ESYDAPPTPSGAR 13 0 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 ESYDAPPT(0.995)PS(0.005)GAR;ESYDAPPT(0.991)PS(0.009)GAR 221.86 6.0395000000000005e-46 93591000.0 6947.0 7917.3 7010.2 6374.1 9274.5 7502.7 7215.299999999999 6932.299999999999 10074.400000000001 10166.7 10210.9 True False 8119.483762156804 8320.256752477506 8004.351771587396 7935.754786144221 7910.233335855855 8296.630734110808 8526.226613644021 7914.974754278362 7792.564485510984 7870.035408920197 7675.251723496471 1.0578784976263895 1.0840369869572437 1.0428780787844967 1.0339406539397613 1.0306154926020248 1.0809587793338544 1.1108725708034353 1.0312332467283152 1.0152845491249989 1.0253781494654344 1.0 12.905998351664087 -8.558190654057613 4.17557538665622 1.0074626526934694 1.0619937587578443 0.4684043397689517 0.0231698292730221 0.12537601909038523 4.879590542126831 0.004091966589214627 0.0047174283129133585 2.765727232383031e-09 8.558190654057613 0.054531106064374946 ESYDAPPT(ph)PSGAR ddPTM_A549_PD325901_60min_R1 2 ESYDAPPTPSGAR 13 0 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 ESYDAPPT(1)PSGAR;ESYDAPPT(0.981)PS(0.019)GAR 223.03 5.489199999999999e-46 113893000.0 8350.8 7687.7 7198.7 7614.4 8044.4 9082.8 8085.1 7677.6 8254.3 8966.6 9212.5 True False 9198.567068465954 8335.569458985496 7687.24707129969 8084.724194442903 7479.389095673417 9008.83268819274 8392.78290483648 7524.464245039319 7907.400476101466 8400.447345750474 8079.4209028490895 1.13851811646825 1.031703826204435 0.9514601558372698 1.0006563950136504 0.9257333149998311 1.1150344556273715 1.0387852057412787 0.9313123224445364 0.9787088172758813 1.0397338431505876 1.0 12.980036175346068 ESYS(ph)IYVYK ddPTM_A549_PD325901_60min_R1 2 ESYSIYVYK 9 0 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 ES(0.002)YS(0.995)IYVY(0.003)K;ESYS(1)IYVYK 137.98 4.3256e-05 14497300.0 9725.3 10410.7 10746.4 11248.4 12448.1 11260.9 11245.3 11283.0 11705.1 13417.199999999999 12304.3 True False 10712.605296612537 11288.046225354834 11475.715327352864 11943.188121030093 11573.788399613686 11169.194963939493 11673.24604516427 11057.951713657725 11213.17535258171 12570.035702206325 10790.94910338411 0.9927398594858534 1.046066116817735 1.063457460266772 1.106778283041353 1.0725459168354408 1.0350521401715038 1.081762682163283 1.0247431998534662 1.0391278139811806 1.1648684079386755 1.0 13.397534140253764 -9.733046197546296 0.5630639943717987 1.0011841771221637 1.057583427239302 0.0 0.056263247913977125 0.6898930988797934 0.46440031608183957 0.016917933262404695 0.007582154169798515 1.8490719157444105e-10 9.733046197546296 0.05639925011713842 ESYS(ph)VYVYK ddPTM_A549_MK2206_60min_R1 3 ESYSVYVYK 9 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 1 ESYS(1)VYVYK;ES(0.004)YS(0.978)VYVY(0.018)K;ES(0.004)YS(0.996)VYVYK 147.12 2.8814000000000002e-05 15995500.0 10677.8 12024.5 10653.8 9674.7 14222.600000000002 10603.8 9236.900000000001 11098.7 16708.3 16566.9 16421.199999999997 True False 12479.951592854173 12636.495689207912 12164.669039989978 12045.001934313794 12130.474380564297 11725.887077767222 10915.125165629766 12671.974713343241 12923.896727672434 12824.425783788249 12343.362837935958 1.0110657651979917 1.0237482163589198 0.9855230863507646 0.9758282319381243 0.9827527992033604 0.9499750782443993 0.8842910403705657 1.026622556569214 1.0470320687610568 1.0389734104205215 1.0 13.591447876846587 ESYS(ph)VYVYK ddPTM_A549_PD325901_60min_R1 2 ESYSVYVYK 9 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 1 ESYS(1)VYVYK;ES(0.001)YS(0.972)VY(0.001)VY(0.026)K 157.95 1.1317999999999999e-05 32044000.0 12930.5 12976.7 12694.7 12001.6 14080.6 12056.3 12468.2 13565.900000000001 14865.2 13648.4 14483.2 True False 14243.19484106901 14070.29205073261 13556.238681432516 12742.911574388787 13091.627231432947 11958.117490053526 12942.684173860835 13295.317482257333 14240.467339125493 12786.637694749492 12701.858216569231 1.121347333454655 1.1077349322304901 1.067264210503371 1.003232074954671 1.0306859837527766 0.9414463054275385 1.0189598996607798 1.0467222398147973 1.1211326009409541 1.0066745728644386 1.0 13.632751950855805 -5.839092137587783 3.2300549867201305 1.0416546448571355 1.117077667119881 0.34243016341287313 0.044296214140701354 0.29557719623897183 6.0589686934122255 0.007915710206268512 0.03080414366569633 1.4484645224813403e-06 5.839092137587783 0.07542302226274544 ESYSIYVYK ddPTM_A549_MK2206_60min_R1 2 ESYSIYVYK 9 0 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 167.33 1.0131999999999999e-06 18951200.0 7649.7 9401.2 8821.599999999999 8865.7 11923.9 9147.0 9330.8 9359.099999999999 13216.5 11003.4 11624.1 False True 8940.782342791264 9879.68092422816 10072.63552940506 11037.796897996395 10169.910105494819 10114.929468712802 11026.085580168476 10685.781086041663 10222.983852413628 8517.72429780681 8737.515161160649 1.0232637286323878 1.130719746060594 1.152803210480159 1.263264978018097 1.1639361898565104 1.1576437101562849 1.2619246292333557 1.2229771152262259 1.170010427890995 0.9748451522772931 1.0 13.093007338487764 -10.452414103629774 0.8469447411751367 1.0026707280339908 1.1752819422491947 0.5413932649455876 0.0643918023382055 0.3904308304124509 0.5162065247061367 0.04000458195213813 0.012456637594941894 3.5284656701806384e-11 10.452414103629774 0.17261121421520387 ESYSIYVYK ddPTM_A549_PD325901_60min_R1 2 ESYSIYVYK 9 0 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 160.88 2.1866e-05 33323000.0 12966.0 12905.9 13358.2 14096.7 15736.8 13424.2 14843.9 14520.8 15098.099999999999 14885.3 14446.8 False True 14282.298774935298 13993.525486259992 14264.76778138213 14967.421143071457 14631.501457012771 13314.87776597932 15408.792737393755 14231.171252652763 14463.579362057057 13945.439617658816 12669.935185810611 1.1272590242553422 1.1044670143168296 1.125875355491764 1.1813336787889697 1.1548205450489573 1.050903384327569 1.2161698155054859 1.123223682200886 1.1415669575212346 1.1006717408686253 1.0 13.62912152381122 -10.636126658757464 0.744707941038176 0.9925027947431722 1.137192537136842 0.22513632731448985 0.04934849662892123 0.3897039947000236 0.3546572219867158 0.03382890287091116 0.007488927722183695 2.311390591982728e-11 10.636126658757464 0.14468974239366994 ESYSVYVYK ddPTM_A549_MK2206_60min_R1 2 ESYSVYVYK 9 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 0 ; 186.3 1.0208e-10 50156000.0 13421.9 13778.8 13688.2 13895.900000000001 17535.800000000003 13928.5 13296.3 13211.900000000001 21333.2 17772.5 16577.5 False True 15687.18858605044 14480.082065986782 15629.392587920822 17300.39612381065 14956.307049533802 15402.40462500999 15712.065599905065 15084.72728474681 16501.264262120105 13757.679906462681 12460.849234275402 1.258918095477836 1.1620461650524736 1.2542798884790192 1.3883801816832324 1.2002638639101961 1.2360637975334303 1.2609145094771481 1.2105697614295858 1.324248769235643 1.1040724149538825 1.0 13.605114774101345 -10.853788419053004 0.9902515516801252 0.9929917715647409 1.2577129845234076 0.5813196708647742 0.06455254045437456 0.24403934056972773 0.40593680250622366 0.04739142183200382 0.010374438851927542 1.4002693440326437e-11 10.853788419053004 0.2647212129586667 ESYSVYVYK ddPTM_A549_PD325901_60min_R1 4 ESYSVYVYK 9 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 0 ;;; 167.33 1.0131999999999999e-06 87703000.0 28028.0 27608.600000000002 29020.800000000003 28729.4 32898.0 30479.0 30312.9 30412.8 32204.6 31474.199999999997 33258.9 False True 30873.381926876948 29935.273614390113 30990.32600424719 30503.949788798593 30587.357971938753 30230.789129280238 31466.473997355337 29806.19284561994 30851.152656513244 29486.913640579405 29168.266145537895 1.058457906713797 1.0262959568808498 1.0624671980712856 1.0457923565492777 1.048651908869734 1.0364273617924624 1.0787913769145656 1.0218705732078501 1.0576958020945924 1.0109244578834953 1.0 14.83211200995493 -10.834832771034849 0.8341558804561471 0.9965379171922097 1.0487165479817426 0.520996738544602 0.015811916439006743 0.3889854005747438 0.4256853578560055 0.013668933893639774 0.0025819843393490296 1.4627403072363804e-11 10.834832771034849 0.05217863078953289 ET(ph)ERASPIKMDLAPSK ddPTM_A549_MK2206_60min_R1 1 ETERASPIKMDLAPSK 16 2 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.539)ERAS(0.457)PIKMDLAPS(0.004)K 47.808 0.007975399999999999 17368000.0 3850.3 4318.3 4359.3 3836.0 5233.4 3672.9 3359.2 3615.1 5475.1 5730.3 6188.5 True False 4500.136509202871 4538.083025049404 4977.514290302835 4775.820172204584 4463.57379264306 4061.563840126301 3969.523157810903 4127.551495779426 4234.9985919381 4435.821250133807 4651.724656088873 0.967412485025832 0.975570000496328 1.0700363108954696 1.026677313317175 0.9595524504659722 0.8731307505077538 0.8533443940227625 0.8873163828337666 0.910414718204505 0.9535863745347739 1.0 12.183549988297921 -6.9030735439172455 5.143782596662397 0.9361425908790818 1.0112353028203065 0.43401873284744974 0.04786653713601477 0.23239456487438978 10.00417917714372 0.008827684770183404 0.01694281701493868 1.2500473278693017e-07 6.9030735439172455 0.07509271194122469 ET(ph)ERASPIKMDLAPSK ddPTM_A549_PD325901_60min_R1 4 ETERASPIKMDLAPSK 16 2 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.638)ERAS(0.362)PIKMDLAPSK;ET(0.556)ERAS(0.443)PIKMDLAPSK;ET(0.927)ERAS(0.073)PIKMDLAPSK;ET(0.505)ERAS(0.494)PIKMDLAPSK 98.816 4.9517e-06 395521000.0 20430.8 18382.4 21439.1 22541.100000000002 25728.299999999996 22029.300000000003 22913.3 23882.5 25267.5 23220.5 26538.6 True False 22504.919775639988 19931.549361038422 22894.086249781372 23933.41255244758 23921.23296581653 21849.900684591128 23785.27817013886 23406.144802041206 24205.594845098152 21754.35366716468 23274.52044204623 0.9669337691265195 0.8563677782607021 0.9836544777276017 1.0283095891080547 1.0277862878154942 0.9387905859971458 1.0219449302667447 1.0056552984764058 1.0400040209365562 0.9346853664002754 1.0 14.506463821747726 -5.944528877919092 6.7356058306949596 1.013715089078563 0.9122888077444014 0.3572750687167995 0.04200896428479398 0.10299617175591097 9.68426007108205 0.004568902555225969 0.014386225071967906 1.136242741982694e-06 5.944528877919092 -0.10142628133416154 ET(ph)ESAPGSPR ddPTM_A549_PD325901_60min_R1 1 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ET(0.496)ES(0.476)APGS(0.027)PR 60.434 0.0084899 62420000.0 311.63 332.31 433.7 371.47 378.57 575.12 385.36 604.46 303.45 551.21 670.13 True False 343.2664481901191 360.3149299420463 463.1334900499642 394.41485823041944 351.98054919560036 570.4364134004285 400.02508567708315 592.4035711103032 290.69705177580033 516.4065065299127 587.7082583040718 0.5840762714151244 0.613084680793484 0.7880329798094238 0.6711065442036972 0.5989035277661364 0.9706115327467337 0.6806524836513628 1.0079891897721167 0.4946281554978556 0.878678322506626 1.0 9.198956360571387 -11.09926444504001 1.434718969329268 1.0000088506592706 0.6925751597980628 0.225190292189259 0.1549713137116342 0.38678364143267957 1.4229787427171638 0.11318833639809558 0.024678299176035253 7.956747108161418e-12 11.09926444504001 -0.30743369086120775 ET(ph)GYTYILPK ddPTM_A549_PD325901_60min_R1 1 ETGYTYILPK 10 0 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 1 ET(0.401)GY(0.099)T(0.401)Y(0.099)ILPK 47.261 0.035519999999999996 2675900.0 2910.4 2851.9 2247.2 2737.0 2839.4 2638.5 2960.4 2839.9 3239.1 2728.7 3259.4 True False 3205.8616654767598 3092.239621743919 2399.7085055113653 2906.058273821999 2639.97033939823 2617.0129307918864 3073.059641993039 2783.2559666415473 3102.9718912736703 2556.4094163171435 2858.5144630389495 1.1215131869819326 1.0817645534864606 0.8394949672425944 1.0166323492141804 0.9235462592662972 0.9155150217465342 1.0750547816805522 0.9736721652555875 1.085519045432722 0.8943139695012662 1.0 11.481049874462101 -7.779011517103045 24.997766690891126 1.0377089919486535 0.9798562142408627 0.0 0.08973785670191649 432.02530367059853 614589.0259031497 0.012574346989548487 0.017394323119626458 1.663368538732377e-08 7.779011517103045 -0.05785277770779085 ET(ph)RISFVEEDVHPK ddPTM_A549_MK2206_60min_R1 2 ETRISFVEEDVHPK 14 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ET(0.5)RIS(0.5)FVEEDVHPK;ET(0.5)RIS(0.5)FVEEDVHPK 91.95700000000001 3.552e-05 30836000.0 891.59 1576.44 1248.5900000000001 1405.98 1515.58 997.46 1218.74 1168.13 1953.99 1548.3600000000001 1342.99 True False 1042.0685947173436 1656.6740624803454 1425.6588369071223 1750.4451631168395 1292.6401896766858 1103.0105551396389 1440.169282373915 1333.7160047480907 1511.4143848808462 1198.584400617278 1009.4885183616061 1.032273845381238 1.641102431921779 1.412258595294336 1.7339921467931123 1.2804902345740725 1.0926429920469214 1.4266326522577009 1.3211799643969244 1.497208098348521 1.1873185071610062 1.0 9.979408786617286 -10.85994542749752 0.9681754303002684 0.9861071930617166 1.396375197773084 0.20870008918283356 0.20440687104560123 0.53018454973366 0.8317779327504689 0.15846201720875316 0.03358635765047286 1.3805577315936195e-11 10.85994542749752 0.4102680047113675 ET(ph)SPESSLIQDEIAVK ddPTM_A549_MK2206_60min_R1 1 ETSPESSLIQDEIAVK 16 0 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 ET(0.499)S(0.499)PES(0.001)S(0.001)LIQDEIAVK 77.64 0.00043245 1164400.0 667.29 652.65 763.82 573.25 582.93 665.3 811.02 745.68 795.42 833.65 741.61 True False 779.9122383258402 685.8670973064612 872.1411614752623 713.6962757341702 497.1817692027017 735.7016044096019 958.3718359870791 851.3824235492255 615.2586400247305 645.32788600493 557.447769605247 1.39907679400732 1.230370152511604 1.5645253403612385 1.2802926384288336 0.8918894223126549 1.3197677782989143 1.7192136882451674 1.5272864472166179 1.1037063444713788 1.1576472652530563 1.0 9.122692826984379 -8.903815891533965 6.223537847046184 1.0451348587956935 1.359673541046584 0.2673360468898053 0.20438005283280722 0.19050760546297138 10.306641098941352 0.0375047586931238 0.03969840022759574 1.2479124239110838e-09 8.903815891533965 0.31453868225089066 ET(ph)SPQVKGEEMPAGK ddPTM_A549_PD325901_60min_R1 1 ETSPQVKGEEMPAGK 15 1 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 ET(0.5)S(0.5)PQVKGEEMPAGK 55.588 0.0039083 26277000.0 4578.0 5278.5 4680.1 4397.3 6139.8 5569.6 5055.7 5374.0 4552.1 5003.5 6329.3 True False 5042.755189854524 5723.337719897363 4997.719729727545 4668.911234007116 5708.561629160124 5524.243024194992 5248.09743008519 5266.811354178555 4360.791067354165 4687.578156097348 5550.836224738425 0.9084676588692107 1.0310766681225705 0.9003543839852807 0.8411185351135327 1.0284147105113215 0.995209154176642 0.9454606869314541 0.9488320571783301 0.7856097515396719 0.8444814378068313 1.0 12.438489412234055 -8.574568728318388 24.999438706361374 0.8971002080821364 0.9514570277141786 0.15538368556413662 0.07175295368527905 217.50138999375142 105191.67940359807 0.015350569703758598 0.01740591145434739 2.6633685778760222e-09 8.574568728318388 0.0543568196320422 ET(ph)SVSKEDTDHEEK ddPTM_A549_MK2206_60min_R1 2 ETSVSKEDTDHEEK 14 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 ET(0.497)S(0.497)VS(0.006)KEDTDHEEK;ET(0.54)S(0.43)VS(0.028)KEDT(0.001)DHEEK 96.447 2.5996e-05 23424000.0 4170.5 4228.4 3725.5 3586.0 6198.1 5533.700000000001 4357.3 5738.9 7214.5 5482.6 5741.0 True False 4874.378441064479 4443.607499043345 4253.8319199236585 4464.570160981659 5286.36770057342 6119.272461027226 5148.965008195237 6552.406649644146 5580.427269189128 4244.076852168929 4315.35125646057 1.1295438427560172 1.0297209276743722 0.9857440720625441 1.0345786230721523 1.2250144626486958 1.418024187918882 1.193174020419926 1.5183947401348732 1.293157135432393 0.9834835219531817 1.0 12.075262279832016 -6.75737180845526 24.73241025638525 1.2013508419203691 1.0395876356164186 0.2450057378992494 0.15244713738975793 132.8582513260699 807816.4353148198 0.02501520357303738 0.05060263150293722 1.7483492499017906e-07 6.75737180845526 -0.16176320630395047 ETAAGGLTLKEERS(ph)PQTLAPVGEDAMK ddPTM_A549_MK2206_60min_R1 9 ETAAGGLTLKEERSPQTLAPVGEDAMK 27 2 Q92797 Q92797 SYMPK Symplekin 1 ET(0.001)AAGGLT(0.001)LKEERS(0.971)PQT(0.027)LAPVGEDAMK;ETAAGGLTLKEERS(0.974)PQT(0.026)LAPVGEDAMK;ET(0.001)AAGGLT(0.002)LKEERS(0.994)PQT(0.003)LAPVGEDAMK;ET(0.018)AAGGLT(0.012)LKEERS(0.969)PQT(0.001)LAPVGEDAMK;ETAAGGLTLKEERS(0.999)PQT(0.001)LAPVGEDAMK;ET(0.003)AAGGLT(0.006)LKEERS(0.983)PQT(0.008)LAPVGEDAMK;ET(0.006)AAGGLT(0.031)LKEERS(0.964)PQTLAPVGEDAMK;ETAAGGLTLKEERS(1)PQTLAPVGEDAMK;ETAAGGLTLKEERS(0.999)PQT(0.001)LAPVGEDAMK 266.81 8.885199999999998e-139 411603500.0 32253.7 36776.7 37015.0 31728.200000000004 44779.4 36039.899999999994 38106.9 34716.700000000004 50284.00000000001 50321.5 53066.19999999999 True False 37697.336032744606 38648.47694401371 42264.28359038363 39501.61042433305 38192.409578912484 39853.61829665055 45030.430466296806 39637.898540434755 38894.7542870478 38953.83820020042 39888.39798738681 0.9450701942119851 0.9689152458876594 1.0595633247479155 0.990303256521456 0.957481661484359 0.9991280750170198 1.1289104786944808 0.9937199922887034 0.9750894056799871 0.9765706362165283 1.0 15.283681562085485 -7.488656702965965 24.452656245990646 1.0008969433791812 0.9869696335156362 0.04874313507213013 0.04855137677329362 2317.9079761284243 1656214.0586915254 0.0076078772406259175 0.012157599325950072 3.2459609964950255e-08 7.488656702965965 -0.013927309863545068 ETAAGGLTLKEERS(ph)PQTLAPVGEDAMK ddPTM_A549_PD325901_60min_R1 6 ETAAGGLTLKEERSPQTLAPVGEDAMK 27 2 Q92797 Q92797 SYMPK Symplekin 1 ETAAGGLTLKEERS(0.999)PQT(0.001)LAPVGEDAMK;ETAAGGLT(0.002)LKEERS(0.995)PQT(0.002)LAPVGEDAMK;ETAAGGLT(0.001)LKEERS(0.986)PQT(0.013)LAPVGEDAMK;ETAAGGLT(0.001)LKEERS(0.993)PQT(0.006)LAPVGEDAMK;ET(0.027)AAGGLT(0.017)LKEERS(0.947)PQT(0.01)LAPVGEDAMK;ETAAGGLTLKEERS(1)PQTLAPVGEDAMK 196.85 8.915299999999998e-69 726715400.0 23121.0 23129.899999999998 24283.9 24531.0 26690.200000000004 25586.0 24776.2 26223.300000000003 24620.800000000003 25779.0 28666.199999999997 True False 25468.226899219408 25079.137847391095 25931.95148495347 26046.22415605678 24815.572428191397 25377.636099011277 25719.07184905687 25700.25570971911 23586.073397138345 24151.309540528327 25140.43913001385 1.0130382674507157 0.9975616463059482 1.0314836328373707 1.0360290057527899 0.9870779225397615 1.0094348777191506 1.0230160147979366 1.0222675736414215 0.9381726896321462 0.9606558348336625 1.0 14.617722229194914 -8.738836214852244 24.99965716394654 0.9708037663387432 1.014811004797883 0.5630392017377068 0.018997615803198455 174.89431939235996 193437.24384280684 0.0042481478280319675 0.004815301819644238 1.8245836764385294e-09 8.738836214852244 0.0440072384591399 ETAEADVAS(ph)LNRR ddPTM_A549_MK2206_60min_R1 2 ETAEADVASLNRR 13 1 H7BYY1;P09493-2;F5H7S3;H0YKJ4;H0YK48;A0A494BZZ2;B7Z596;P09493-5 H7BYY1 TPM1 Tropomyosin alpha-1 chain 1 ETAEADVAS(1)LNRR;ETAEADVAS(1)LNRR 97.836 6.7811e-05 30644000.0 1298.23 1162.2 1182.23 1299.83 1767.55 1538.12 1313.7199999999998 1296.74 1821.04 1831.23 2009.88 True False 1517.3394853238558 1221.351015842441 1349.8879910592805 1618.2884083515867 1507.5457364593267 1700.8828374785762 1552.4059189328811 1480.556866099697 1408.5773476033228 1417.5538711555303 1510.7713261339438 1.0043475535154085 0.8084287772179739 0.8935091417929125 1.071167012742278 0.9978649385126528 1.1258373838952362 1.0275585007993764 0.9800006397317815 0.9323564216749235 0.9382981041763901 1.0 10.561069592008641 -6.205658405628581 17.798461923392736 0.9914455987534387 0.8927242281580732 0.3001018284130256 0.068654911323913 14.031972376811174 4476.146820813563 0.009824953226950444 0.02599464860954364 6.22789948072304e-07 6.205658405628581 -0.09872137059536557 ETAEADVAS(ph)LNRR ddPTM_A549_PD325901_60min_R1 2 ETAEADVASLNRR 13 1 H7BYY1;P09493-2;F5H7S3;H0YKJ4;H0YK48;A0A494BZZ2;B7Z596;P09493-5 H7BYY1 TPM1 Tropomyosin alpha-1 chain 1 ETAEADVAS(1)LNRR;ETAEADVAS(1)LNRR 67.32600000000001 0.0018563 43637000.0 770.8299999999999 882.4200000000001 987.5 783.5 938.86 900.9399999999999 694.56 731.27 872.22 903.2 944.97 True False 849.084094144946 956.7846302532598 1054.5176883198974 831.8950155423951 872.9177124911677 893.6030433457049 720.9918608778154 716.684246179783 835.5636266267547 846.1717978589242 828.7446806583786 1.024542436242739 1.154498668387425 1.2724277005098341 1.003801333459557 1.053301134672378 1.078260970116636 0.8699806800630548 0.86478292157535 1.008228041913897 1.0210283306876866 1.0 9.694783895015146 -6.390900103584975 8.602422676908475 0.9929096020714919 1.1506634704384933 0.43787667053052803 0.08218597146451087 0.22216129623189598 14.431734026899639 0.01161178044429797 0.027031226268027814 4.065368300113144e-07 6.390900103584975 0.15775386836700134 ETAIQTEDSAISES(ph)PEEPLPNLKPKPNLR ddPTM_A549_PD325901_60min_R1 2 ETAIQTEDSAISESPEEPLPNLKPKPNLR 29 2 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 ETAIQTEDSAISES(1)PEEPLPNLKPKPNLR;ETAIQTEDSAISES(1)PEEPLPNLKPKPNLR 218.69 4.6799999999999996e-91 37595000.0 3791.9 4280.8 4357.0 4699.0 6266.299999999999 6047.299999999999 5734.4 5811.3 5070.3 5323.6 6486.4 True False 4176.850896550756 4641.558039468905 4652.692220769411 4989.246557796703 5826.176705561426 5998.0527937759225 5952.6257299840845 5695.389062623341 4857.212923443206 4987.4669874687415 5688.613920677379 0.7342475609688401 0.8159383118965834 0.8178955868067393 0.8770583884523143 1.0241821271055194 1.0543961811107927 1.0464105690750178 1.001191000486311 0.8538482293178419 0.8767455582351865 1.0 12.473861455055811 -6.3814183136768845 2.5459570496375874 0.9584426142412739 0.7865139607384282 0.6081399608496612 0.06584568499624122 0.20097039885605708 2.51492702722873 0.011577953363968259 0.03127014250392378 4.155101970848495e-07 6.3814183136768845 -0.1719286535028457 ETAPTSAYSS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 ETAPTSAYSSPAR 13 0 A0A6I8PRZ9;A0A6I8PIX2;A0A6I8PIU5;A0A6I8PIW1;O43301 A0A6I8PRZ9 HSPA12A Heat shock 70 kDa protein 12A 1 ETAPT(0.002)S(0.01)AYS(0.245)S(0.743)PAR 78.744 0.00012418 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ETAQALK ddPTM_A549_MK2206_60min_R1 1 ETAQALK 7 0 Q9Y4G6;A0A1B0GVU7;H0YMT1 Q9Y4G6 TLN2 Talin-2 0 87.616 0.035698 3980200.0 4018.5 4910.2 4216.6 4241.1 6419.3 4324.2 3724.8 4924.7 6697.8 6025.1 6265.1 False True 4696.724557107687 5160.108206840091 4814.577284539013 5280.169690390216 5475.029473595288 4781.7839738283465 4401.547945407848 5622.79130626122 5180.758994188778 4664.025725386319 4709.302762036426 0.9973290727811902 1.0957265794074205 1.0223545878917037 1.1212211142922845 1.1625987434343128 1.0153910707071587 0.9346496005503164 1.1939753272159075 1.1001116844627084 0.9903856177999207 1.0 12.201297761439994 -10.880563863998379 1.193908719267242 1.0009722373408472 1.074750080897365 0.13863790376481688 0.0721836304096092 0.7932156445648203 2.049647985840606 0.046499909311041955 0.011834960365278582 1.3165462973374098e-11 10.880563863998379 0.07377784355651773 ETAVPGPLGIEDIS(ph)PNLSPDDKSFSR ddPTM_A549_MK2206_60min_R1 3 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.973)PNLS(0.025)PDDKS(0.001)FS(0.001)R;ETAVPGPLGIEDIS(0.984)PNLS(0.016)PDDKSFSR;ETAVPGPLGIEDIS(0.498)PNLS(0.498)PDDKS(0.002)FS(0.002)R 75.141 1.9216999999999997e-06 11637200.0 1961.3000000000002 2542.12 1737.31 1880.7400000000002 2866.2 2046.3 2095.26 2363.0600000000004 2434.76 3213.8500000000004 3213.4 True False 2292.3194908187916 2671.503049727575 1983.6866817346859 2341.5213844296272 2444.585776832182 2262.8381077759936 2475.9416205152634 2698.0309915677385 1883.2907475127774 2487.8390528842383 2415.4240946717296 0.949033958829632 1.106018216685318 0.8212581327273216 0.9694038366160515 1.012073110566704 0.9368284901883976 1.0250546171072117 1.1170009430308414 0.779693616399371 1.0299802251589074 1.0 11.23806080107881 -8.765691481518138 24.999990944981246 0.8959664430817295 0.9893550060028187 0.01585323203156086 0.09864347627988548 158.54059300395542 932127.4549215761 0.018198128550621778 0.0197077416327857 1.7151753183183907e-09 8.765691481518138 0.09338856292108921 ETAVPGPLGIEDIS(ph)PNLSPDDKSFSR ddPTM_A549_PD325901_60min_R1 2 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.877)PNLS(0.121)PDDKS(0.001)FS(0.001)R;ETAVPGPLGIEDIS(0.999)PNLS(0.001)PDDKSFSR 74.76899999999999 1.983e-06 13216400.0 1687.85 1276.35 1705.5 1451.3400000000001 1861.46 2430.6 2064.51 2244.99 2091.2 2172.5 2256.1400000000003 True False 1859.199289470503 1383.9124938507143 1821.245486004644 1540.985975567708 1730.7174712883802 2410.805999462861 2143.0760577932197 2200.211913289415 2003.3141363438917 2035.32797923883 1978.6490828498183 0.939630632629777 0.6994229071976149 0.9204489577209576 0.7788071108335437 0.8746965221319861 1.2184100861334208 1.0831006247487702 1.1119768191136161 1.0124656027730539 1.0286452493675018 1.0 10.950300055044819 -7.023110903590071 24.22613734549858 1.0350605616842674 0.8305190003193585 0.6257160863546147 0.08711277356997599 284.886810184813 298634.2786660002 0.012700320527814042 0.0221040352595299 9.48176301385497e-08 7.023110903590071 -0.20454156136490886 ETAVPGPLGIEDISPNLS(ph)PDDKSFSR ddPTM_A549_MK2206_60min_R1 3 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.005)PNLS(0.978)PDDKS(0.008)FS(0.009)R;ETAVPGPLGIEDISPNLS(0.986)PDDKS(0.011)FS(0.003)R;ETAVPGPLGIEDIS(0.134)PNLS(0.852)PDDKS(0.007)FS(0.007)R 102.6 1.5965e-12 60756700.0 2718.91 3215.1800000000003 2297.97 2738.0899999999997 4882.7300000000005 3177.67 3172.62 3415.15 5141.72 4849.73 5420.5 True False 3177.795537032639 3378.8189288558783 2623.8567003159214 3408.9221729175315 4164.4868851133215 3513.928930233368 3749.043986941541 3899.257970958236 3977.128629639633 3754.1726247162333 4074.440251810576 0.7799342586065678 0.8292719294029207 0.6439796728274387 0.8366602434291912 1.02210036906609 0.8624323129224607 0.9201371857828968 0.9570045773098542 0.9761165666553338 0.9213959201016572 1.0 11.992386159611943 -6.585240679474037 4.8878554861178225 0.9725562171365686 0.755679870510191 0.676864476797145 0.06014226541846851 0.07554039736060185 3.6040296615046548 0.008393434883996931 0.01798564540080058 2.598718993026115e-07 6.585240679474037 -0.21687634662637756 ETAVPGPLGIEDISPNLS(ph)PDDKSFSR ddPTM_A549_PD325901_60min_R1 2 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.001)PNLS(0.985)PDDKS(0.011)FS(0.004)R;ETAVPGPLGIEDISPNLS(0.992)PDDKS(0.007)FS(0.002)R 172.03 1.4231e-48 121756000.0 9729.9 10015.099999999999 10688.9 9818.099999999999 11832.0 12796.6 12097.900000000001 11619.4 12224.3 11995.599999999999 13710.9 True False 10717.672285226197 10859.107624996499 11414.31303157727 10424.541738477079 11000.96113818407 12692.388732299201 12558.2922047249 11387.641951757038 11710.555182148357 11238.195768818096 12024.546220556167 0.8913161535280353 0.9030783720081402 0.9492510421777337 0.8669384729592662 0.9148753671367439 1.0555399346880423 1.044388035471666 0.9470329892607231 0.9738874937441683 0.9346045632563005 1.0 13.553694830492299 -7.1159195914077715 7.8210534126072995 0.992902808962316 0.904193118797583 0.5660049057206293 0.03823640567854437 0.14749340264972366 9.09213526386705 0.005149180055294709 0.008945208395856814 7.657383684283563e-08 7.1159195914077715 -0.08870969016473296 ETCSTLAES(ph)PR ddPTM_A549_MK2206_60min_R1 1 ETCSTLAESPR 11 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 ETCSTLAES(1)PR 203.51 2.8292000000000004e-24 32315000.0 2795.0 3282.5 2897.3 2439.3 3980.3 3274.0 2937.9 3181.0 4259.1 3687.1 3153.2 True False 3266.727668810747 3449.56522930891 3308.1807063735937 3036.9286095043376 3394.803142671528 3620.4525068946878 3471.678401206434 3631.916491403934 3294.4206503851174 2854.181549197836 2370.1734161072045 1.3782652554495578 1.45540626093702 1.3957547088714637 1.281310721344693 1.4323015858675796 1.5275053218852457 1.4647360305425887 1.5323420922377182 1.3899492028713685 1.2042078987982117 1.0 11.210776903872151 -10.366737598767665 0.7472617481967775 0.9990681709674089 1.432073812833907 0.6499493240712555 0.08824234139796015 0.21082849053320873 0.21505131116569326 0.05062264683568344 0.015397053245808225 4.297960315936322e-11 10.366737598767665 0.43300564186649815 ETCSTLAES(ph)PR ddPTM_A549_PD325901_60min_R1 2 ETCSTLAESPR 11 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 ETCSTLAES(1)PR;ETCSTLAES(0.999)PR 155.47 3.729e-13 88799000.0 2686.27 2582.2799999999997 2737.84 2151.35 2283.27 2058.0299999999997 2060.73 2573.73 2359.71 2427.3599999999997 2824.84 True False 2958.978152872546 2799.8977981124467 2923.6462863693655 2284.2340034296526 2122.900992053883 2041.270086017671 2139.152207824726 2522.394936097874 2260.539594812569 2274.096075344152 2477.4025881361435 1.19438728571714 1.1301747287746762 1.1801256284990604 0.9220277779511726 0.8569059393980178 0.8239557413046081 0.8634657193258614 1.0181610966974812 0.9124635639108095 0.9179356178258666 1.0 11.274612616190575 -6.261636613891942 24.998909362237967 0.9364353813353816 1.1644237768847803 0.7803826874294828 0.05913202181461996 7.541337640830754 955912.8197242568 0.009697542198912583 0.023924498155344913 5.474738576975928e-07 6.261636613891942 0.22798839554939865 ETCSTLAES(ph)PRNGLQEK ddPTM_A549_PD325901_60min_R1 2 ETCSTLAESPRNGLQEK 17 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 ETCSTLAES(1)PRNGLQEK;ETCSTLAES(1)PRNGLQEK 107.09 2.7245000000000003e-09 38515000.0 12850.8 14918.0 15508.6 14564.099999999999 14661.599999999999 16937.6 15875.599999999999 17923.0 13205.7 14921.1 17276.6 True False 14155.403755741048 16175.192214725554 16561.106856787806 15463.69137952904 13631.819795774127 16799.665801243376 16479.75464546166 17565.5117046785 12650.710353058785 13978.979199549147 15151.68772539079 0.9342460069329309 1.0675505269039833 1.0930206031790868 1.0205920066327268 0.899689859165345 1.1087653141828517 1.087651418385909 1.159310568105406 0.8349373734689017 0.9226021188467045 1.0 13.887190881989463 -8.768779697386469 24.997492916082678 0.922053766894562 1.046324956330699 0.33693049606651215 0.0794265794378248 159.27134124168768 542397.797764878 0.015697931280351844 0.016875030372099687 1.703022173740693e-09 8.768779697386469 0.12427118943613713 ETDKS(ph)PTSTEPR ddPTM_A549_MK2206_60min_R1 2 ETDKSPTSTEPR 12 1 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 ET(0.059)DKS(0.914)PT(0.023)S(0.003)T(0.001)EPR;ET(0.003)DKS(0.968)PT(0.024)S(0.004)T(0.001)EPR 82.54299999999999 0.00053228 8186300.0 2026.7800000000002 2158.21 1824.67 1676.54 2293.15 1595.15 1921.6100000000001 1859.1 2657.7 2361.5 2565.48 True False 2368.8509139864923 2268.0536705397644 2083.43564335716 2087.2923752627394 1955.830672717437 1763.9477142251262 2270.74166327727 2122.633118254967 2055.7351934748 1828.0355098670218 1928.4005123540248 1.2284019314508496 1.1761320617837423 1.080395711373195 1.08239567553047 1.0142243067182801 0.9147206210144858 1.1775259593274765 1.1007221293795653 1.0660312421123224 0.9479542751394076 1.0 10.913189002816559 -5.6851955286420575 1.4151673999331227 1.0396363518401506 1.2473632686528215 0.4689062027962124 0.06812514204568765 0.4066579412398361 1.1931199746161372 0.009379155930594702 0.09568317953901026 2.0644504868905883e-06 5.6851955286420575 0.20772691681267097 ETDKS(ph)PTSTEPR ddPTM_A549_PD325901_60min_R1 2 ETDKSPTSTEPR 12 1 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 ETDKS(0.999)PT(0.001)STEPR;ETDKS(0.454)PT(0.454)S(0.082)T(0.009)EPR 102.66 0.00017217 18965000.0 2300.2 2899.1 2777.8 3008.9 3289.2 3202.8999999999996 3062.3 3391.1 3100.4 2873.0 2996.3 True False 2533.714610682257 3143.417331392333 2966.318212268366 3194.752919292293 3058.177939123989 3176.816644318109 3178.8375022548585 3323.461850233513 2970.1009699314277 2691.598289690754 2627.7740951106375 0.9642056428658033 1.1962281450453165 1.1288330369751494 1.215763914119027 1.1637902758894614 1.208938260799909 1.2097072987246338 1.264744125614643 1.1302725662216322 1.0242883110457899 1.0 11.359625539823009 -9.980738943088035 0.9222896637095763 1.0144002426846195 1.1707138810888116 0.3777345574008848 0.07470419229158644 0.35347667551975936 0.6100969414849698 0.028040055574503443 0.014308857884155781 1.0453483953370281e-10 9.980738943088035 0.1563136384041921 ETDKSPTST(ph)EPR ddPTM_A549_MK2206_60min_R1 1 ETDKSPTSTEPR 12 1 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 ET(0.004)DKS(0.212)PT(0.212)S(0.212)T(0.361)EPR 95.264 0.00010279 25262000.0 1827.0 2069.1 1970.5 1696.6 2415.9 1920.7 1731.1 1735.3 2598.3 2459.9 2505.6 True False 2135.352934138546 2174.4083521593493 2249.946530186436 2112.267076163268 2060.524310323379 2123.9471991425253 2045.6184622786527 1981.2840891333674 2009.7891986324937 1904.2068815252537 1883.3903689579508 1.1337813813500608 1.1545181434491534 1.1946256959099217 1.12152377487836 1.0940505719286615 1.1277254222753994 1.0861362020293541 1.0519773923605542 1.0671123903774007 1.0110526807986282 1.0 10.879116341964423 -8.04849384906311 0.22752711154122446 0.9814536821407306 1.2000729735726974 0.8475462372709749 0.022189374691081322 0.6783689979148237 0.11202205785384214 0.033078848383249135 0.052602400969037566 8.943471985319494e-09 8.04849384906311 0.2186192914319668 ETDPS(ph)PEER ddPTM_A549_MK2206_60min_R1 2 ETDPSPEER 9 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;H0Y482;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 ET(0.001)DPS(0.999)PEER;ET(0.078)DPS(0.922)PEER 85.37700000000001 0.0012782 92075000.0 1023.44 1010.74 1132.57 908.71 450.2 273.837 0.0 143.18 214.75 1362.6100000000001 1562.6399999999999 True False 1196.171651294337 1062.182348780407 1293.1854563274558 1131.343990793542 383.976176376334 302.81424958171095 0.0 163.47620347035996 166.10946788528184 1054.795454626255 1174.5933613300017 1.0183708598011332 0.904297933012059 1.1009643838469947 0.9631792823284067 0.3269013677563737 0.2578034744201448 0.0 0.1391768494973056 0.14141870144506413 0.8980090381507873 1.0 10.197945673682472 -6.746975402342169 19.94042080350243 0.4637341265194412 0.9975530661360243 0.4750001499088613 0.2988745327112317 21.68782107336166 29896.235527571458 0.0562808747320542 0.11637536432934097 1.790707273600296e-07 6.746975402342169 0.5338189396165831 ETDPS(ph)PEER ddPTM_A549_PD325901_60min_R1 2 ETDPSPEER 9 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;H0Y482;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 ET(0.08)DPS(0.92)PEER;ET(0.003)DPS(0.997)PEER 83.869 0.0013988 250180000.0 930.37 920.3399999999999 754.3 1007.05 1040.7 853.28 1112.06 1052.15 956.45 1229.61 1476.48 True False 1024.8204774978058 997.9002817335107 805.4913339743783 1069.2531913235084 967.6048222200947 846.3311705840825 1154.3800518425821 1031.1640428542933 916.2537326444693 1151.9722147534442 1294.8823201778698 0.7914390840991887 0.7706493989325883 0.6220575579900829 0.8257531782321592 0.7472530956227597 0.65359697742095 0.8914941797058533 0.7963380353456743 0.7075961408744922 0.8896346770687278 1.0 10.338605275384532 -10.855660801771897 0.8055298016936695 1.021900176143099 0.7523879007612714 0.43755281149830927 0.07880250947383081 0.4141692377915319 0.4104143576076059 0.07431927093596276 0.01314869898538514 1.394245329113075e-11 10.855660801771897 -0.26951227538182765 ETDPS(ph)PEERDK ddPTM_A549_MK2206_60min_R1 1 ETDPSPEERDK 11 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;H0Y482;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 ET(0.171)DPS(0.829)PEERDK 54.143 0.016188 1110300.0 475.48 502.92 609.5 300.74 499.4 268.81 375.52 355.67 144.32 623.98 727.65 True False 555.7293996301017 528.5164798549995 695.9362649828134 374.4213135007315 425.9389215511799 297.25529577836335 443.7471231903876 406.0873116936927 111.63175043168273 483.02248462706933 546.9544228816468 1.0160433417874633 0.9662897999260954 1.272384381346166 0.6845566976642787 0.7787466445688602 0.5434736119552053 0.811305484746776 0.7424518290833243 0.20409698827106526 0.8831128599020189 1.0 9.095276809589357 -6.354559425072405 6.630002330200543 0.6458067801974845 1.0717238989385585 0.3640106556622398 0.21257271759370377 0.23045224210624288 13.85887249840173 0.040938347713571126 0.09589690744819407 4.4201863075990554e-07 6.354559425072405 0.42591711874107396 ETDPS(ph)PEERDK ddPTM_A549_PD325901_60min_R1 1 ETDPSPEERDK 11 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;H0Y482;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 ET(0.043)DPS(0.957)PEERDK 70.488 0.0025025 4562200.0 789.11 824.22 367.85 650.34 743.76 721.33 671.73 888.97 691.91 874.75 542.15 True False 869.2198662879216 893.6799120003417 392.81451306174597 690.5100247706973 691.5208634327063 715.4557276361994 697.29305273476 871.2387959665265 662.8314288818387 819.5181357142313 475.4689869720095 1.8281315713638584 1.8795756116327982 0.8261622184095694 1.4522714281916922 1.4543974105158948 1.5047368960750278 1.46653740168296 1.8323777572012614 1.394058176334557 1.723599557845559 1.0 8.893207432436085 -10.055458555619118 0.8284332704145883 1.0287562256399414 1.508647128641534 0.0 0.34449608042310564 0.5116366090774197 0.7041039268858788 0.12575172193391967 0.05611583344990136 8.801190967532276e-11 10.055458555619118 0.47989090300159254 ETDPS(ph)PEERDKKPQES ddPTM_A549_MK2206_60min_R1 1 ETDPSPEERDKKPQES 16 3 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;H0Y482;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 ET(0.177)DPS(0.822)PEERDKKPQES(0.001) 43.534 0.059883000000000006 5329000.0 1130.6 1395.0 1469.9 1450.8 1595.9 1276.2 943.43 969.88 1925.5 2251.4 2287.6 True False 1321.4176394838757 1465.999541473246 1678.3539227206506 1806.2460651288875 1361.1452240759459 1411.2466369270019 1114.8390190442772 1107.363460132929 1489.3773243916646 1742.8071763347923 1719.525785451872 0.768477943549199 0.8525603709327323 0.9760562690716488 1.050432671850993 0.7915817463116741 0.820718507897305 0.6483409719565851 0.6439935181558946 0.8661558535455594 1.0135394252763719 1.0 10.74779503487667 -9.971031105554733 1.1537649510846975 0.9795395553248555 0.828043830292254 0.26160937645984783 0.11557400590991491 0.5123231496075672 1.3746683995097104 0.04093797869122644 0.02379207928609935 1.0689783128475144e-10 9.971031105554733 -0.15149572503260145 ETDPVKS(ph)PPLPEHQK ddPTM_A549_MK2206_60min_R1 3 ETDPVKSPPLPEHQK 15 1 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 ET(0.009)DPVKS(0.991)PPLPEHQK;ET(0.14)DPVKS(0.86)PPLPEHQK;ET(0.009)DPVKS(0.991)PPLPEHQK 123.43 1.3691e-07 105635000.0 9722.099999999999 11108.3 10684.400000000001 9926.199999999999 13545.599999999999 11523.400000000001 9486.5 10701.599999999999 15536.899999999998 15211.6 15686.8 True False 11362.952797475831 11673.665022614518 12199.608580118735 12358.119445604052 11553.06018374781 12742.798539386147 11210.074254755034 12218.584572275488 12017.816957331012 11775.288995084975 11791.334626344831 0.9636697759461523 0.9900206713269413 1.0346249145420499 1.048067910649646 0.9797924111097097 1.080691791318983 0.9507044461030634 1.0362342312782873 1.0192075229957567 0.9986392014332283 1.0 13.525439401500417 -5.514980153894966 4.726500464571821 1.0138821224171903 0.9682643220406023 0.1875296171235138 0.03331057967067005 0.20860846961034044 12.34480145526069 0.0040205378825882345 0.02075890158426296 3.0550607181911874e-06 5.514980153894966 -0.045617800376588025 ETDPVKS(ph)PPLPEHQK ddPTM_A549_PD325901_60min_R1 4 ETDPVKSPPLPEHQK 15 1 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 ET(0.035)DPVKS(0.965)PPLPEHQK;ET(0.181)DPVKS(0.819)PPLPEHQK;ET(0.014)DPVKS(0.986)PPLPEHQK;ET(0.002)DPVKS(0.998)PPLPEHQK 103.85 2.4943999999999998e-06 127567300.0 14579.8 14499.400000000001 14126.000000000002 15018.999999999998 16999.2 14800.1 14289.3 16198.600000000002 15604.7 15751.9 16789.7 True False 16059.93056291853 15721.315323648736 15084.675306538607 15946.689519376176 15805.234836056348 14679.572892557517 14833.087130904985 15875.506215444133 14948.888725806 14757.322345763927 14724.673338677394 1.0906816194511975 1.0676851677485746 1.0244488933357587 1.0829910553933244 1.0733844121716871 0.9969370834189298 1.0073627298707415 1.0781567679157837 1.0152271892198559 1.0022172992456664 1.0 13.845948008315023 -2.0000000007278165 0.11925302358187773 0.9802250770310762 1.3023600834570934 0.43330690260641336 0.027384464942222686 55.68669589663446 0.440662158541912 0.10052287970258081 2.996706278310047 0.009999999983241406 2.0000000007278165 0.3221350064260172 ETDSPS(ph)TPGKDQR ddPTM_A549_MK2206_60min_R1 2 ETDSPSTPGKDQR 13 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 ETDS(0.07)PS(0.501)T(0.429)PGKDQR;ET(0.016)DS(0.078)PS(0.486)T(0.42)PGKDQR 52.555 0.0092075 74461000.0 1802.33 1457.5500000000002 1764.54 1500.0500000000002 2297.42 1419.22 1632.8400000000001 1705.01 2389.97 2171.18 2353.69 True False 2106.5192412621363 1531.7330693005936 2014.778305189126 1867.5623173398044 1959.4725613738708 1569.4009183980097 1929.5058921766959 1946.7003888741335 1848.645610997843 1680.7089300500022 1769.203814460664 1.190659450338288 0.865775359956217 1.1388050877582607 1.0555947834134218 1.107544843255501 0.8870662077316606 1.0906069026111045 1.100325679247746 1.0449025691036036 0.949980390225623 1.0 10.788884542511829 ETDSPST(ph)PGKDQR ddPTM_A549_MK2206_60min_R1 2 ETDSPSTPGKDQR 13 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 ET(0.038)DS(0.153)PS(0.179)T(0.63)PGKDQR;ETDS(0.002)PS(0.161)T(0.837)PGKDQR 99.01100000000001 0.00060912 76833700.0 1617.08 1718.35 1498.22 1576.19 2356.62 1414.95 1306.96 1836.9299999999998 2299.79 2257.19 2521.58 True False 1890.0035701897982 1805.8066753337273 1710.6901245652994 1962.356620757858 2009.964319795638 1564.679069832205 1544.4177144357398 2097.320452862191 1778.8912370099767 1747.2892113134633 1895.4020939323889 0.9971517791608058 0.9527301257683123 0.9025473434062385 1.035324708693636 1.0604421754254618 0.8255130005612512 0.814823260657868 1.1065306193214561 0.9385297413697127 0.9218567484476943 1.0 10.888288221388942 -11.030671284247875 1.0089996111292288 1.0031742831488524 0.9565745159628881 0.0 0.08921571426192544 2.3446089371967527 3.726593187750441 0.08692835403020825 0.014638245496760006 9.318128940648748e-12 11.030671284247875 -0.04659976718596426 ETDSPST(ph)PGKDQR ddPTM_A549_PD325901_60min_R1 4 ETDSPSTPGKDQR 13 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 ETDSPS(0.016)T(0.983)PGKDQR;ETDS(0.01)PS(0.123)T(0.867)PGKDQR;ETDS(0.006)PS(0.033)T(0.961)PGKDQR;ETDS(0.013)PS(0.134)T(0.853)PGKDQR 102.66 5.1818000000000004e-05 206638800.0 10909.16 10527.48 11310.710000000001 10642.880000000001 12396.549999999997 10980.670000000002 10860.480000000001 11605.45 10967.8 11079.539999999999 12436.599999999999 True False 12016.64989230087 11414.667685794271 12078.32279742456 11300.266525865787 11525.859093775834 10891.247064149533 11273.781509482698 11373.970195450598 10506.861507551896 10379.975953553869 10906.977042102904 1.1017397254907961 1.0465473285339824 1.1073941707954504 1.0360585231127484 1.0567418496696137 0.9985578058986784 1.0336302594168725 1.042816002229125 0.9633156342947738 0.9516822042886204 1.0 13.412963681881626 -7.24053336598675 0.5747989253697653 0.9841443723645024 1.0884062257503897 0.6520035647449167 0.028011413915169894 0.42118635253084996 0.25875414479982706 0.0061348421789797075 0.019461929074595003 5.747336614979128e-08 7.24053336598675 0.10426185338588734 ETDVS(ph)PFPPR ddPTM_A549_MK2206_60min_R1 6 ETDVSPFPPR 10 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3 Q9H8V3-2 ECT2 Protein ECT2 1 ET(0.022)DVS(0.978)PFPPR;ET(0.015)DVS(0.985)PFPPR;ETDVS(1)PFPPR;ET(0.002)DVS(0.998)PFPPR;ETDVS(1)PFPPR;ET(0.001)DVS(0.999)PFPPR 164.65 3.9294e-09 30399030.0 13586.250000000002 15755.24 15545.669999999998 14112.25 20210.550000000003 17206.1 15458.96 15985.66 24269.67 22463.31 24069.79 True False 15879.276848078716 16557.114419928977 17750.279764487885 17569.75188352298 17237.604867753696 19026.838081515176 18267.65292798059 18251.676259030548 18772.628495699133 17388.832669553656 18092.596850590842 0.8776670910875988 0.9151320043583616 0.9810797151492502 0.9711017179354886 0.9527435453352721 1.0516366577246663 1.0096755639245911 1.008792513852676 1.037586182388521 0.9611020912670033 1.0 14.143111873997793 -5.009935614554871 0.5475368058968633 1.0183816541505384 0.7380638677202607 0.6637867229890421 0.028406932353463695 1.5609596465614684 0.25799301376485206 0.004364346078982214 0.2954402723790173 9.77382110012311e-06 5.009935614554871 -0.2803177864302777 ETDVS(ph)PFPPR ddPTM_A549_PD325901_60min_R1 2 ETDVSPFPPR 10 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3 Q9H8V3-2 ECT2 Protein ECT2 1 ET(0.003)DVS(0.997)PFPPR;ET(0.001)DVS(0.999)PFPPR 104.07 0.00035541 25099000.0 8310.3 7540.2 7641.3 8116.1 9486.5 8598.3 9528.1 9172.0 8103.299999999999 9620.3 10628.400000000001 True False 9153.955538280477 8175.639116334196 8159.884568869702 8617.413063999531 8820.200966648339 8528.27829555728 9890.697059476384 8989.057264705194 7762.746480984816 9012.87261618933 9321.1741789787 0.982060345886966 0.8771039956287978 0.8754138064785913 0.9244986627793841 0.9462542805540353 0.9149360511672903 1.0610999075397696 0.96436962684138 0.8328077913715548 0.9669246001770188 1.0 13.186295985838916 -6.512000327045629 22.995243925261278 0.9344755278694288 0.9067292455640468 0.02893538246929095 0.060800519679258605 680.1224400745538 1437662.82108656 0.010714924436179961 0.023558482350584574 3.076094498285672e-07 6.512000327045629 -0.02774628230538201 ETEAAPTS(ph)PPIVPLK ddPTM_A549_MK2206_60min_R1 2 ETEAAPTSPPIVPLK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 ETEAAPT(0.017)S(0.983)PPIVPLK;ETEAAPT(0.092)S(0.908)PPIVPLK 155.66 1.9722999999999997e-19 36370000.0 4397.1 3907.3999999999996 3865.7000000000003 4120.9 5248.200000000001 4553.6 3845.2 4033.2 6071.2 5998.0 6247.7 True False 5139.222981226385 4106.269970145203 4413.914388095262 5130.520684994229 4476.196732248502 5035.458929564956 4543.823066925003 4604.918451156974 4696.082893714193 4643.047634208085 4696.223662251994 1.0943309669288532 0.8743770027716506 0.9398858967416908 1.092477925664634 0.9531481152032732 1.0722357561544007 0.9675482672275644 0.9805577379482738 0.999970025163211 0.988676853602324 1.0 12.19728540451077 ETEAAPTS(ph)PPIVPLK ddPTM_A549_PD325901_60min_R1 3 ETEAAPTSPPIVPLK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 ETEAAPT(0.136)S(0.864)PPIVPLK;ETEAAPT(0.288)S(0.712)PPIVPLK;ETEAAPT(0.093)S(0.907)PPIVPLK 155.39 2.0187e-19 51830400.0 12265.2 13015.7 12335.2 12494.5 15275.8 13787.7 14580.5 14809.0 14254.099999999999 14423.4 16843.1 True False 13510.354074836989 14112.578717603119 13172.340849583397 13266.25688793166 14202.880506649099 13675.41754249737 15135.368906255739 14513.622877564238 13655.049746967996 13512.70406248715 14771.50547720787 0.9146226899948139 0.9553920376889504 0.8917399021994102 0.8980978214035952 0.9615052797809845 0.9257971412323719 1.0246327924807193 0.9825418878230429 0.9244182841104083 0.9147817792395619 1.0 13.850529249241756 -7.106092432983643 1.9577160463537342 0.9682920857560767 0.9175405734943585 0.266800712484039 0.03541872187094391 0.34532056988550025 2.5987293478849516 0.005706599166261352 0.01124538445877573 7.832629194097556e-08 7.106092432983643 -0.05075151226171826 ETEEQDS(ph)DSAEQGDPAGEGK ddPTM_A549_MK2206_60min_R1 2 ETEEQDSDSAEQGDPAGEGK 20 0 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 ETEEQDS(0.751)DS(0.249)AEQGDPAGEGK;ETEEQDS(0.991)DS(0.008)AEQGDPAGEGK 210.16 6.954699999999999e-67 75530000.0 4352.4 5444.0 4725.0 4598.0 7332.6 4841.3 4378.1 6018.200000000001 6588.799999999999 6174.9 6653.1 True False 5086.978714036459 5721.076346795945 5395.076049292521 5724.510206412063 6253.9842534364825 5353.603152605153 5173.544098955674 6871.2982799645215 5096.447320151549 4779.985801345697 5000.95165378119 1.017202137955128 1.143997531443895 1.0788098791583671 1.1446841726781731 1.2505588308792952 1.0705168782340309 1.0345119203549964 1.3739981418874894 1.019095498813342 0.9558152392318326 1.0 12.28798694265953 -8.95794277484916 24.999999558971773 1.0084239939258692 1.1393441127336676 0.3091992312445496 0.09752858532845746 127.21044711595056 75617.77355591403 0.015738238050865272 0.01674032590702886 1.1016844642899358e-09 8.95794277484916 0.1309201188077984 ETEEQDS(ph)DSAEQGDPAGEGK ddPTM_A549_PD325901_60min_R1 1 ETEEQDSDSAEQGDPAGEGK 20 0 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 ETEEQDS(0.824)DS(0.176)AEQGDPAGEGK 245.41 2.3787999999999997e-86 59356000.0 6137.9 7594.9 7750.7 6808.2 7583.6 6253.7 6981.4 6769.8 7125.3 7198.7 7532.2 True False 6761.015089516838 8234.948877303863 8276.709110745347 7228.727051455944 7050.9540979997255 6202.771940607627 7247.080997368665 6634.771028194637 6825.848419898203 6744.17285346217 6605.787150549787 1.0234987799984037 1.2466264337049497 1.252948198619523 1.0943021454837991 1.0673904467861772 0.938990584958733 1.0970806101079875 1.0043876493420527 1.0333134060079578 1.0209491616606001 1.0 12.689514769000407 -6.641026262852136 2.6049691457074067 1.0175461841905953 1.1804344235716742 0.48826026045260695 0.06761508821639305 0.15228289365682723 2.086840993406505 0.009065793952002936 0.020931845219865474 2.2854605917909354e-07 6.641026262852136 0.16288823938107888 ETEEQDS(ph)DSAEQGDPAGEGKEVLCDFCLDDTRR ddPTM_A549_PD325901_60min_R1 1 ETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTRR 33 2 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 ETEEQDS(0.952)DS(0.047)AEQGDPAGEGKEVLCDFCLDDTRR 122.41 6.2941e-22 60631000.0 1379.0 1197.5 1477.9 1554.6 1412.8 1368.4 1413.5 1715.5 1093.3 1470.3 1399.5 True False 1518.9950648338558 1298.4175276266162 1578.1991813346592 1650.6241112472335 1313.5698018954067 1357.2562040915745 1467.2915159968788 1681.2830067162854 1047.3524030531644 1377.4650070770324 1227.3703721614447 1.2376012158081096 1.0578856692947989 1.2858377692101137 1.344845980223902 1.070230984622972 1.1058244804307897 1.195475749844706 1.36982531503957 0.8533303612411125 1.1222896024867095 1.0 10.26135494804919 -8.77346275169926 24.999986229733683 0.9307393253029175 1.2020894120982608 0.3743251431966663 0.11745890054181612 115.75190597837357 240680.0936125738 0.018886739877672677 0.020181286501962627 1.684756917767839e-09 8.77346275169926 0.27135008679534334 ETEEQDSDS(ph)AEQGDPAGEGK ddPTM_A549_PD325901_60min_R1 1 ETEEQDSDSAEQGDPAGEGK 20 0 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 ETEEQDS(0.418)DS(0.581)AEQGDPAGEGK 102.21 5.1452e-10 70340000.0 1263.5 1268.1 1336.8 1233.0 1375.7 1283.5 1068.3 1451.2 1472.0 1252.0 1388.0 True False 1391.769589860462 1374.9672373973367 1427.5232868314322 1309.1596096538271 1279.0755779073545 1273.0476015430681 1108.9547410961907 1422.2546775556243 1410.1369590178876 1172.9485063323432 1217.2847992569377 1.143339332512847 1.1295361925464382 1.1727110103591447 1.0754751973022025 1.0507611519408897 1.0458091666963798 0.9110068093950778 1.1683828455130678 1.1584281343845515 0.9635777157887303 1.0 10.249451029054535 -11.062325975417782 1.3988318384641387 1.0004449121823025 1.0998729558627505 0.24836427248010073 0.07358466338499325 0.5923684526042154 2.083257675231174 0.05437857499197813 0.012293680555743907 8.663113903455932e-12 11.062325975417782 0.099428043680448 ETEEQDSDS(ph)AEQGDPAGEGKEVLCDFCLDDTRR ddPTM_A549_PD325901_60min_R1 1 ETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTRR 33 2 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 ETEEQDS(0.387)DS(0.613)AEQGDPAGEGKEVLCDFCLDDTRR 120.31 9.1095e-22 52507000.0 1268.3 1285.3 990.52 1418.0 1179.1 856.02 1029.9 1436.9 946.69 1357.8 1477.5 True False 1397.0568823268873 1393.6167417607421 1057.7426436806325 1505.5866394883426 1096.2840836741743 849.0488569325266 1069.0934080829043 1408.2399022737568 906.9039115031554 1272.068276276403 1295.7768666441832 1.0781616173971373 1.0755067308540132 0.8162999903061904 1.161918134398808 0.8460438767620097 0.6552431045720105 0.8250598043563271 1.0867919767087921 0.6998920376251699 0.9817031844153994 1.0 10.33960159154117 -6.799985301436402 24.83640901929674 0.8539339350934619 1.0205333814265793 0.2234545051185467 0.14271080367536407 179.0404467205359 115361.15773939002 0.02230345615751478 0.04215014389274494 1.5849468335930606e-07 6.799985301436402 0.1665994463331174 ETEGSLS(ph)DSDFKEPPSEGR ddPTM_A549_MK2206_60min_R1 1 ETEGSLSDSDFKEPPSEGR 19 1 P78411-3;P78411-2;P78411 P78411-3 IRX5 Iroquois-class homeodomain protein IRX-5 1 ET(0.009)EGS(0.129)LS(0.721)DS(0.141)DFKEPPSEGR 52.483000000000004 0.0036558999999999997 3116900.0 1759.9 1756.1 1417.7 1766.6 2131.9 1271.3 1588.8 2067.8 2434.3 1897.9 2416.3 True False 2056.9280945760397 1845.4779890904424 1618.7511777951345 2199.4170793056865 1818.3003341108529 1405.8281221793575 1877.4643942396883 2360.9169823719126 1882.9349367783086 1469.1630718512042 1816.2660235125725 1.1325037565796876 1.0160835280733687 0.8912522487562402 1.2109553616226978 1.0011200510123215 0.7740210431622524 1.0336946074720712 1.2998740007292604 1.0367065795443344 0.8088920085670669 1.0 10.826759810360619 -9.240048042969265 0.002944571176147975 6.15210248320567e-05 2.0550064464461095 0.016533103569902674 0.1495990000324199 152643.87995505182 256.2657370900557 89798.42919214457 89035.33357389456 5.753762839514972e-10 9.240048042969265 2.0549449254212773 ETEPLVS(ph)PHQDK ddPTM_A549_MK2206_60min_R1 2 ETEPLVSPHQDK 12 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 ET(0.001)EPLVS(0.999)PHQDK;ETEPLVS(1)PHQDK 76.82 0.00034568 13369700.0 2490.3999999999996 2536.8 2109.2 1974.2 2804.8 2465.3 1933.34 2288.93 3086.6 2682.9 2666.3999999999996 True False 2910.7186355657545 2665.912284451131 2408.316275802707 2457.879088625207 2392.217635496092 2726.1764096663037 2284.602852441691 2613.392837054135 2387.4900282873605 2076.8310266450276 2004.2592911037216 1.4522665048806418 1.3301234507352815 1.2015991576002505 1.2263279005540657 1.1935669432165767 1.3601914791000076 1.1398738988424935 1.3039195320955557 1.1912081629780538 1.0362087559545958 1.0 10.968853446783632 -14.999999999992237 0.10258486951549856 0.10702986733549517 1.4421412246414638 0.640725960594067 0.0773651039155841 44.82806201420304 0.3294922362614009 8.446352973635296 0.48168275090578017 1.0000000000178743e-15 14.999999999992237 1.3351113573059685 ETERAS(ph)PIK ddPTM_A549_MK2206_60min_R1 6 ETERASPIK 9 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.001)ERAS(0.999)PIK;ETERAS(1)PIK;ET(0.001)ERAS(0.999)PIK;ET(0.001)ERAS(0.999)PIK;ET(0.103)ERAS(0.897)PIK;ET(0.067)ERAS(0.933)PIK 77.541 0.00065767 2074764000.0 29667.699999999997 30322.3 29619.099999999995 27234.899999999998 40553.3 34463.9 32808.4 36194.6 44782.899999999994 41459.600000000006 42457.7 True False 34674.882454374456 31865.575552985072 33819.5337590688 33907.45172262114 34587.96329063167 38110.84702271471 38769.26160119168 41325.29539131368 34639.644653596224 32093.84756505727 31914.28131709214 1.086500495181254 0.9984738567783138 1.059699055198723 1.0624538709089315 1.083776975798844 1.1941627838664164 1.2147935031339172 1.2948840984610028 1.0853963562401914 1.005626517049875 1.0 14.961914539423942 -4.457349040953631 16.454005953738637 1.079844126402398 1.07876433790396 0.0 0.0938207114326632 24325050.84662664 0.0 0.013946260255251851 0.0 3.488598253597486e-05 4.457349040953631 -0.001079788498437928 ETERAS(ph)PIK ddPTM_A549_PD325901_60min_R1 6 ETERASPIK 9 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ETERAS(1)PIK;ETERAS(1)PIK;ET(0.001)ERAS(0.999)PIK;ETERAS(1)PIK;ET(0.146)ERAS(0.854)PIK;ET(0.117)ERAS(0.883)PIK 103.43 0.00035246 2893015800.0 46816.8 46704.4 44575.3 42458.59999999999 52435.299999999996 42223.6 44926.2 44148.8 45197.700000000004 44993.4 50497.4 True False 51569.6070712934 50640.34369710604 47600.4479110541 45081.17129152308 48752.42541996477 41879.74500078996 46635.89112555996 43268.21754993642 43298.1978482356 42152.50904537831 44286.539929392886 1.1644532888212105 1.143470313504807 1.0748287851555949 1.0179429543016252 1.100840695563301 0.9456540309439361 1.053048876699618 0.9770060523788943 0.977683014235634 0.9518131042204491 1.0 15.434580664609559 -5.434224747643821 0.5181984485895056 0.9888299824350375 1.2801021373086692 0.724575412053416 0.038040950380987114 1.179399734474114 0.2338714347057327 0.0063675785773225305 0.19993980755028878 3.6793851597246468e-06 5.434224747643821 0.2912721548736317 ETERAS(ph)PIKMDLAPSK ddPTM_A549_MK2206_60min_R1 13 ETERASPIKMDLAPSK 16 2 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.014)ERAS(0.986)PIKMDLAPSK;ET(0.002)ERAS(0.998)PIKMDLAPSK;ET(0.251)ERAS(0.748)PIKMDLAPSK;ET(0.142)ERAS(0.858)PIKMDLAPSK;ET(0.272)ERAS(0.728)PIKMDLAPSK;ET(0.012)ERAS(0.988)PIKMDLAPSK;ET(0.225)ERAS(0.775)PIKMDLAPSK;ET(0.087)ERAS(0.913)PIKMDLAPSK;ET(0.067)ERAS(0.932)PIKMDLAPSK;ET(0.001)ERAS(0.999)PIKMDLAPSK;ET(0.009)ERAS(0.991)PIKMDLAPSK;ETERAS(1)PIKMDLAPSK;ET(0.158)ERAS(0.842)PIKMDLAPSK 180.9 1.2775e-34 4926119200.0 74896.8 81134.8 81793.3 76836.3 107061.49999999999 77373.7 82588.1 78479.0 116042.0 118456.8 121856.2 True False 87537.54878904665 85264.21476524991 93392.81985663454 95661.1969493128 91312.89517351141 85561.33357749459 97593.28873231797 89603.63858185774 89758.67228099584 91697.32660817953 91595.94247997054 0.9556924293692228 0.9308732729497794 1.0196174342226667 1.0443824732763813 0.9969098270207654 0.9341170717928302 1.0654761126963552 0.9782489939600931 0.9799415765673631 1.0011068626564015 1.0 16.482996070735446 -5.754137123882249 24.999560993937543 0.9962389769377067 0.9432828365047982 0.3009226007849094 0.03364628328527383 157.74905883040168 540045.4016454009 0.00439454979045257 0.016346265793659585 1.7614198089569664e-06 5.754137123882249 -0.05295614043290853 ETERAS(ph)PIKMDLAPSK ddPTM_A549_PD325901_60min_R1 16 ETERASPIKMDLAPSK 16 2 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.24)ERAS(0.76)PIKMDLAPSK;ET(0.017)ERAS(0.983)PIKMDLAPSK;ET(0.209)ERAS(0.791)PIKMDLAPSK;ET(0.036)ERAS(0.963)PIKMDLAPSK;ET(0.178)ERAS(0.822)PIKMDLAPSK;ET(0.099)ERAS(0.901)PIKMDLAPSK;ET(0.171)ERAS(0.826)PIKMDLAPS(0.003)K;ET(0.126)ERAS(0.874)PIKMDLAPSK;ET(0.419)ERAS(0.581)PIKMDLAPSK;ET(0.052)ERAS(0.948)PIKMDLAPSK;ET(0.263)ERAS(0.737)PIKMDLAPSK;ETERAS(1)PIKMDLAPSK;ET(0.191)ERAS(0.809)PIKMDLAPSK;ETERAS(1)PIKMDLAPSK;ETERAS(1)PIKMDLAPSK;ETERAS(1)PIKMDLAPSK 165.88 9.2367e-22 8106692400.0 133796.5 130622.09999999999 134395.51 134802.2 156308.5 145097.19999999998 141978.19999999998 150430.2 147554.5 145991.3 155416.2 True False 147379.42218422276 141630.08278529986 143516.3974944542 143128.6257359911 145329.93019505095 143915.5765100233 147381.25809445235 147429.75165079132 141353.29749959588 136773.38440296878 136300.99266446393 1.081279155075788 1.0390979553168385 1.052937287461674 1.0500923209586226 1.0662426395735343 1.055865945630377 1.0812926246052001 1.0816484074604165 1.0370672636814124 1.0034657982254593 1.0 17.056436543600363 -9.546371833367568 1.015906743079882 1.0071098711378765 1.0617743936257305 0.7047426024417243 0.01485167106821228 0.1866347166541308 0.4026964142842061 0.0045399935816129245 0.003208039125261485 2.842026784768791e-10 9.546371833367568 0.05466452248785392 ETES(ph)APGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 2 ET(0.177)ES(0.823)APGS(1)PR;ET(0.031)ES(0.969)APGS(1)PR 156.73 1.6574e-08 490340000.0 7244.700000000001 7129.6 6871.8 6784.8 10581.0 7599.8 7978.799999999999 8038.6 11652.2 10723.900000000001 9412.0 True False 8467.428244090599 7492.466187016238 7846.32457048219 8447.07630458125 9024.548916565946 8404.005791661044 9428.444680739942 9178.096167180021 9012.995304739845 8301.363541927987 7074.740642014788 1.196853520510003 1.0590446443394266 1.1090617971046448 1.193976815830755 1.2756013786529252 1.187888887650827 1.3326912119925927 1.2973049658773395 1.2739682994475212 1.1733806173230787 1.0 12.788461544785044 -4.053491248272458 9.322496355794247 1.1668274817261457 1.1673140254704422 0.0 0.10124527604242897 0.0 0.0 0.017356505451621058 7928103.981157962 8.841149853502022e-05 4.053491248272458 0.00048654374429646374 ETES(ph)APGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 2 ET(0.169)ES(0.831)APGS(1)PR;ET(0.009)ES(0.991)APGS(1)PR 167.18 6.884800000000001e-10 757340000.0 9788.9 9059.4 9708.8 9197.3 10676.0 9378.5 9366.1 10024.2 10641.2 10505.900000000001 11576.4 True False 10782.661921792698 9822.86743196706 10367.697551757188 9765.39633241617 9926.154590200571 9302.124605431767 9722.532060826583 9824.259467167229 10193.9873697698 9842.55568105189 10152.576188845836 1.0620616601369717 0.9675246212640087 1.0211888449699786 0.9618638807305832 0.9776981138152872 0.9162329277224808 0.9576418713812044 0.967661732788638 1.0040788840343262 0.9694638580368842 1.0 13.3095582333921 -8.771098887551492 24.65766129890876 1.001926142369642 0.976592373835669 0.0 0.036604153873378314 300.12475150260195 766120.7835365694 0.005988572927451051 0.0064172412703551035 1.6939520487288002e-09 8.771098887551492 -0.025333768533972956 ETES(ph)APGS(ph)PRAVT(ph)PVPTKTEEVSNLK ddPTM_A549_PD325901_60min_R1 2 ETESAPGSPRAVTPVPTKTEEVSNLK 26 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 3 ET(0.143)ES(0.878)APGS(0.973)PRAVT(0.934)PVPT(0.024)KT(0.024)EEVS(0.025)NLK;ET(0.17)ES(0.845)APGS(0.984)PRAVT(0.955)PVPT(0.015)KT(0.015)EEVS(0.015)NLK 55.36600000000001 0.0021628 19484200.0 2877.0 2977.4 3984.4 4119.2 3102.7 4691.6 4119.1 4595.1 3874.5 5108.4 4249.299999999999 True False 3169.0709220645404 3228.315947186209 4254.805344143596 4373.6336286180385 2884.7770557339186 4653.3931650950235 4275.854604558007 4503.447125713784 3711.668238936689 4785.854752195 3726.663038532064 0.8503776406124554 0.8662752478039565 1.1417198979759564 1.1736058729744498 0.774091197917973 1.2486755891211456 1.1473681844447814 1.2084395823153615 0.9959763468174246 1.2842198778669704 1.0 11.86366866245814 -5.706173699561606 10.693250944248417 1.0426716035488235 0.8575950851578402 0.20759725951933294 0.1484580630409937 0.5759417105531378 107.77127967758626 0.017669184285338424 0.06845420793067654 1.9670993751773206e-06 5.706173699561606 -0.18507651839098327 ETES(ph)APGSPR ddPTM_A549_MK2206_60min_R1 2 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ETES(0.873)APGS(0.126)PR;ET(0.001)ES(0.987)APGS(0.013)PR 166.86 1.0099e-09 138617000.0 4941.740000000001 4504.71 4612.84 3678.44 5874.900000000001 4420.39 3873.96 3713.58 5437.349999999999 4590.67 5083.14 True False 5775.784898056825 4733.980497827918 5267.0100747552415 4579.657965131444 5010.709992432971 4888.152735782595 4577.8083866495335 4239.991337361778 4205.798906663732 3553.6344586412183 3820.8560504729126 1.5116468199166908 1.2389842577926973 1.3784895335440173 1.198594740193003 1.311410303409046 1.2793344400340814 1.1981106658239407 1.1096966965915893 1.1007478039229388 0.9300623765193614 1.0 11.899680190308082 -3.9669499865626383 0.12485089669106295 0.8862672622580101 2.1162310212858424 0.8152869691703283 0.06854380681731603 13.31310294940632 0.1777516301532143 0.23356850421659106 2.749531220685594 0.00010790709810997995 3.9669499865626383 1.2299637590278323 ETES(ph)APGSPR ddPTM_A549_PD325901_60min_R1 1 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ET(0.019)ES(0.967)APGS(0.014)PR 93.258 0.00060291 63809000.0 408.28 393.61 539.87 576.16 694.89 503.3 333.16 414.14 462.27 544.96 676.79 True False 449.72828504014956 426.7808960744154 576.5088247020386 611.7480946457008 646.0833236403591 499.201291668583 345.8385861121473 405.8796528134551 442.8423994872275 510.5511325965445 593.54912052529 0.7576934570169032 0.7190321429449933 0.9712908414249342 1.0306612772070232 1.0885086024027404 0.8410446151900464 0.582662115320937 0.6838181353116187 0.7460922511271059 0.8601666061685131 1.0 9.213223618135292 -5.736366272354405 24.68722861538914 0.8708385438434669 0.7383626460668281 0.10308537801421125 0.14617230922456015 405.95447389522974 399699.2371765326 0.023325692657115607 0.09026127423131985 1.8349901089741784e-06 5.736366272354405 -0.13247589777663882 ETES(ph)EAEDNLDDLEK ddPTM_A549_PD325901_60min_R1 1 ETESEAEDNLDDLEK 15 0 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 ET(0.013)ES(0.987)EAEDNLDDLEK 131.24 2.4699000000000003e-09 2254700.0 1117.8 1188.4 941.77 1133.4 1106.3 1468.7 1364.3 1072.0 1141.0 1271.5 1420.7 True False 1231.2782331191315 1288.550638690162 1005.6841755230686 1203.4075438618388 1028.5973045278088 1456.7393941459325 1416.2191830736053 1050.6181190322686 1093.0477379343818 1191.217273004453 1245.9629065593167 0.9882141969372616 1.0341805778539988 0.807154185914114 0.965845401597875 0.82554408250262 1.169167546222277 1.1366463444601618 0.8432178145122426 0.8772714919361405 0.9560615863709444 1.0 10.283045403329377 ETESAPGS(ph)PR ddPTM_A549_MK2206_60min_R1 4 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR 130.56 1.2113e-06 453884000.0 4402.5199999999995 4865.599999999999 3580.61 3552.8 4821.360000000001 3711.4300000000003 4258.95 4187.0 5492.63 6300.82 5773.76 True False 5145.557744720103 5113.238257342092 4088.3943392290553 4423.236159491255 4112.144330816972 4104.171059152153 5032.74608625826 4780.520072149725 4248.558074927755 4877.460385890461 4339.976044330566 1.18561892788369 1.1781720002859601 0.9420315452132141 1.019184464225201 0.9475039237114645 0.9456667542009934 1.1596253147140476 1.1015084008112566 0.9789358354818035 1.1238450019239221 1.0 12.083471364009059 -5.748392271452313 24.836861117591372 1.0023482537432449 1.1818956273403622 0.37702505659270025 0.07388807110901732 123.71482373941775 235502.45646902383 0.008993321683425499 0.034388153887299926 1.7848746792002939e-06 5.748392271452313 0.17954737359711737 ETESAPGS(ph)PR ddPTM_A549_PD325901_60min_R1 5 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR;ET(0.001)ES(0.004)APGS(0.995)PR 157.68 1.3134999999999998e-08 568480710.0 7440.04 6223.0199999999995 5127.03 4855.68 6661.530000000001 6204.49 5319.969999999999 5572.24 5923.15 5755.56 6877.219999999999 True False 8195.347383732038 6747.455735090592 5474.981087135965 5155.604325550602 6193.647113830909 6153.9626905321065 5522.424369549288 5461.097301862282 5674.220603808967 5392.152959349985 6031.365538289481 1.3587880442173084 1.1187277063966838 0.907751495474554 0.8547988499156282 1.026906274294138 1.0203265995841788 0.9156175885030953 0.905449564811333 0.9407853939189695 0.8940185974666064 1.0 12.558268958808213 -5.411887904202503 2.7368786651072035 0.959456472223366 1.37737034589477 0.8297592057350196 0.05619722238294749 0.09938822412404241 1.1753843680966898 0.007767319938414747 0.0784154260719843 3.873576129366611e-06 5.411887904202503 0.41791387367140387 ETFASDTNEALAS(ph)LDESQEGHAEAK ddPTM_A549_MK2206_60min_R1 1 ETFASDTNEALASLDESQEGHAEAK 25 0 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 ETFAS(0.002)DT(0.016)NEALAS(0.491)LDES(0.491)QEGHAEAK 56.298 0.0010572000000000001 1188400.0 550.16 654.41 614.29 609.46 710.47 567.23 678.23 735.42 1013.8 860.22 1059.8 True False 643.0135578793994 687.7166737888932 701.4055590095029 758.7777273596995 605.9608041539179 627.2539021031996 801.4556118486805 839.6680371292931 784.1759187059314 665.8957045512635 796.6224110079967 0.8071748283678962 0.8632906434539033 0.8804742991375145 0.9524935739625868 0.7606625118507181 0.7873917346983891 1.0060671163325272 1.0540351683890354 0.9843759199715254 0.835898783852541 1.0 9.637752256716718 -7.773602770270073 24.99072573650027 0.9989343001604384 0.8459719924395053 0.4577761583523742 0.07066722602576359 97.77491221427255 200886.6024658546 0.00812839967471056 0.011275969874434997 1.6842138318145992e-08 7.773602770270073 -0.1529623077209331 ETFASDTNEALASLDES(ph)QEGHAEAK ddPTM_A549_MK2206_60min_R1 2 ETFASDTNEALASLDESQEGHAEAK 25 0 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 ETFASDTNEALASLDES(1)QEGHAEAK;ETFASDTNEALASLDES(1)QEGHAEAK 269.81 2.881699999999999e-138 27350000.0 5637.5 5904.1 4977.8 6014.9 8949.8 7324.5 6523.6 7710.2 10169.599999999999 7832.6 8032.299999999999 True False 6588.972176357992 6204.593471549952 5683.7268906176305 7488.550770019124 7633.296275728366 8099.573728390397 7708.8536771538475 8803.144461497208 7866.201837514139 6063.210220023051 6037.6582297976365 1.0913125462848257 1.027649004862256 0.941379368339657 1.2403071662885623 1.2642809488711668 1.3415091447900438 1.276795304362934 1.4580395455395396 1.3028564284563338 1.0042321027876848 1.0 12.55977337802716 -6.270265764716291 24.49843721149272 1.2059792341273647 1.0208671753425707 0.32599307728010807 0.13325866195842795 571.3693715605426 1585889.666289666 0.022825323579160128 0.05379537226304787 5.367032625109921e-07 6.270265764716291 -0.1851120587847941 ETFASDTNEALASLDES(ph)QEGHAEAK ddPTM_A549_PD325901_60min_R1 2 ETFASDTNEALASLDESQEGHAEAK 25 0 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 ETFASDTNEALAS(0.001)LDES(0.999)QEGHAEAK;ETFASDTNEALASLDES(1)QEGHAEAK 153.39 9.4049e-34 68986000.0 9058.8 8372.1 9663.400000000001 9341.7 10784.099999999999 10175.8 9061.2 10363.7 11056.0 9147.1 9938.5 True False 9978.442707263908 9077.646248887511 10319.216434744816 9918.715592459974 10026.662019125319 10092.931658575733 9406.028924478902 10156.987873334625 10591.354768275663 8569.550544946143 8716.12750534228 1.1448252335854348 1.0414769911665072 1.1839221521736543 1.137972750671741 1.1503574279953783 1.1579605337794319 1.0791522862319038 1.1653096936809626 1.2151445423192837 0.9831832473416323 1.0 13.089471585978172 -10.985695007042771 1.2647346696068233 1.000166577671919 1.1471954244274594 0.610502071038937 0.04575019736026672 0.2718330287362157 0.7750639997327927 0.03419089867339733 0.007883754878347225 1.0334869401553965e-11 10.985695007042771 0.1470288467555403 ETFLTSPEELYR ddPTM_A549_PD325901_60min_R1 2 ETFLTSPEELYR 12 0 H0YJ63;G3V438;H0YJG7;O95433-2;O95433 H0YJ63 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 0 ; 108.7 0.00030544 3441700.0 3780.7000000000003 3444.3 4565.6 3783.0 4405.0 4307.5 3785.2 4181.6 4899.0 4625.1 4775.9 False True 4164.513880795764 3734.5632487718995 4875.44907118311 4016.6673181836377 4095.6079964250193 4272.421148147071 3929.247857340915 4098.19470759826 4693.112066731411 4333.070396675494 4188.4945769245 0.9942746264347931 0.8916242292270293 1.1640098803143308 0.9589763683382801 0.9778233972150241 1.0200374071593514 0.9381050363508068 0.9784409726053545 1.1204770545930702 1.0345173706437392 1.0 12.032216090242237 -8.725496303797247 24.983305963075793 1.0568919859948946 0.990681712927945 0.13350517954550056 0.06914728020025297 246.58271054741573 171394.4353618823 0.012307556330227414 0.013955213770423797 1.8814977192411957e-09 8.725496303797247 -0.0662102730669496 ETFS(ph)SAEGTVDKDTTIMELR ddPTM_A549_PD325901_60min_R1 3 ETFSSAEGTVDKDTTIMELR 20 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 ET(0.001)FS(0.805)S(0.192)AEGT(0.003)VDKDTTIMELR;ET(0.022)FS(0.948)S(0.025)AEGT(0.006)VDKDTTIMELR;ETFS(0.898)S(0.102)AEGTVDKDTTIMELR 198.55 2.3989999999999996e-55 164839000.0 12753.400000000001 13607.5 11212.8 13526.599999999999 14387.600000000002 12741.0 11599.400000000001 14018.199999999999 13187.9 13936.3 13580.900000000001 True False 14048.11577944314 14754.251780525397 11973.768036043903 14362.107360862487 13377.06461052545 12637.241520265088 12040.82151443523 13738.596003934836 12633.658425157615 13056.35963961616 11910.535396418258 1.179469714154722 1.2387563857928925 1.005308967021303 1.2058322218816013 1.1231287398338288 1.0610137243759308 1.010938728921972 1.1534826560413325 1.0607128902834053 1.0962025807456544 1.0 13.539950645513583 -2.000000000626989 0.11034978497199782 0.9546035954032582 1.6716865579890723 0.24080864776145283 0.0695220038918732 61.82897626082862 0.46013291848159005 0.286063202960856 6.790648960730583 0.009999999985563042 2.000000000626989 0.717082962585814 ETFSS(ph)AEGTVDKDTTIMELR ddPTM_A549_MK2206_60min_R1 2 ETFSSAEGTVDKDTTIMELR 20 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 ET(0.005)FS(0.45)S(0.506)AEGT(0.04)VDKDTTIMELR;ETFS(0.357)S(0.642)AEGT(0.001)VDKDTTIMELR 183.24 3.4392999999999997e-44 47921000.0 8546.599999999999 9265.6 8217.1 7646.2 12940.0 10332.6 8631.2 9433.9 13333.599999999999 11527.7 13911.2 True False 9989.05713569157 9737.17946342258 9382.408339606684 9519.519343250957 11036.543141514345 11425.988873775214 10199.377315937565 10771.184215107065 10313.560889383907 8923.584563664648 10456.665110411821 0.95528134737196 0.9311935842458184 0.8972658338521822 0.9103781409019461 1.055455350724117 1.0926991304711695 0.9753948518234488 1.030078337727587 0.986314544884351 0.8533872386119866 1.0 13.352135193294988 -6.744648879977574 24.998776798874214 1.006013792240703 0.9222011289534016 0.2762055783974148 0.05809964366130037 150.18406445933613 223602.46358316077 0.005413100071380839 0.011244952873360591 1.8003258610659286e-07 6.744648879977574 -0.08381266328730153 ETFSS(ph)AEGTVDKDTTIMELR ddPTM_A549_PD325901_60min_R1 1 ETFSSAEGTVDKDTTIMELR 20 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 ET(0.001)FS(0.235)S(0.754)AEGT(0.01)VDKDTTIMELR 154.69 2.6620000000000004e-27 63260000.0 5478.1 6864.3 5617.9 6456.3 7115.7 6474.8 5757.6 7694.3 5988.5 7336.5 6239.9 True False 6034.232679235928 7442.778651262949 5999.164477177068 6855.090987678832 6615.917779832347 6422.071375513095 5976.708618679613 7540.831150438421 5736.824170569716 6873.272137945077 5472.431857985135 1.1026601766509048 1.3600495802250638 1.0962520197347634 1.252658994314599 1.2089538895178178 1.1735315381117604 1.0921485682747532 1.3779671170204097 1.048313495616906 1.2559813107432112 1.0 12.417966369927791 -8.963865325886688 21.23244635314016 1.0213142594237214 1.2063299310488576 0.04052992874249295 0.1158929470097885 19.57689480341552 11503.3725813305 0.01438255387077638 0.015242177890307637 1.0867625749295371e-09 8.963865325886688 0.1850156716251361 ETGEPYRLS(ph)PEPTPLAEP ddPTM_A549_MK2206_60min_R1 1 ETGEPYRLSPEPTPLAEP 18 1 C9JWH7 C9JWH7 EIF4G1 1 ET(0.004)GEPYRLS(0.98)PEPT(0.016)PLAEP 84.859 7.4521e-05 4892100.0 1357.7 1553.4 1378.2 1092.4 2045.3 1419.4 1079.2 1215.7 1824.1 2082.5 2095.8 True False 1586.846567421951 1632.4614248921437 1573.6494838380847 1360.0380490396997 1744.4390793925259 1569.5999658785352 1275.2766706089317 1388.0291979251062 1410.9442624891392 1612.0618036409364 1575.355018862578 1.007294577045668 1.036249864535803 0.9989173646549051 0.8633216213204188 1.1073307657673432 0.996346821563943 0.8095170011453635 0.8810897742448411 0.8956357427977442 1.0233006429273708 1.0 10.621461272789404 -7.564832845109573 24.99991227993456 0.9321786323124526 1.0020758489141035 0.20953434251173086 0.07593699325824048 205.79942081631813 122632.4615229484 0.011937444228160312 0.017706098411372075 2.7237494458112674e-08 7.564832845109573 0.06989721660165094 ETGEPYRLS(ph)PEPTPLAEP ddPTM_A549_PD325901_60min_R1 2 ETGEPYRLSPEPTPLAEP 18 1 C9JWH7 C9JWH7 EIF4G1 1 ETGEPYRLS(0.74)PEPT(0.26)PLAEP;ETGEPYRLS(0.994)PEPT(0.005)PLAEP 136.36 5.6513e-13 11886500.0 5889.2 5283.6 4696.5 5066.4 5964.6 5824.5 5342.8 5599.1 5365.7 5579.9 5984.9 True False 6487.0672486000985 5728.86751479581 5015.23273234876 5379.340021370757 5545.66707275293 5777.067203106818 5546.12317769234 5487.421558091026 5140.1982887243785 5227.584161728307 5248.79524140695 1.2359154720734025 1.091463326593814 0.9555016916614215 1.0248713798042568 1.0565599947591788 1.1006463269003925 1.0566468918314464 1.0454630645146128 0.9793101182865991 0.9959588669965039 1.0 12.357770602925457 -5.382064057344384 2.9853347184714534 1.010584709573913 1.2468596638044434 0.68172376536744 0.041292823588191564 0.13684280878902286 1.9200304791595597 0.006542577676066355 0.06517524046354702 4.1489284246970064e-06 5.382064057344384 0.23627495423053024 ETGEPYRLSPEPT(ph)PLAEP ddPTM_A549_MK2206_60min_R1 1 ETGEPYRLSPEPTPLAEP 18 1 C9JWH7 C9JWH7 EIF4G1 1 ETGEPYRLS(0.286)PEPT(0.714)PLAEP 113.01 3.828e-09 3864600.0 1121.1 950.06 1022.7 1201.7 1299.6 1048.1 1054.5 1485.7 1328.8 1480.6 1975.1 True False 1310.3142717365763 998.413995965642 1167.7342382246477 1496.1165539463632 1108.4305615697099 1159.0092463275264 1246.0890003309114 1696.3025247654264 1027.8289216575665 1146.1314316786406 1484.6281600131103 0.8825875104814159 0.6725010496613679 0.7865499723609821 1.0077382298427853 0.7466048344118177 0.7806730853854285 0.8393273372370275 1.142577360751696 0.6923140415499663 0.7719989843574835 1.0 10.535885923513494 -8.00539176395234 24.754985845831488 0.8778878383860315 0.8109732607705238 0.07761344876792031 0.13460362880766505 646.0078124474367 2966004.2078359267 0.023973166935985446 0.032598295079177525 9.876617528150766e-09 8.00539176395234 -0.06691457761550768 ETGLSYTEDDKKAS(ph)PEHR ddPTM_A549_MK2206_60min_R1 4 ETGLSYTEDDKKASPEHR 18 2 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 ETGLSYT(0.021)EDDKKAS(0.979)PEHR;ETGLSYTEDDKKAS(1)PEHR;ETGLSYTEDDKKAS(1)PEHR;ETGLSYT(0.212)EDDKKAS(0.788)PEHR 202.66 1.5267999999999999e-49 339676000.0 19337.299999999996 21241.4 20079.5 17660.9 25879.8 21173.399999999998 19603.8 19669.1 29853.4 28415.1 30460.300000000003 True False 22600.963488405745 22322.496530645003 22927.075033178662 21987.821292827917 22072.91570276376 23413.955134234577 23165.556704302624 22457.25515909246 23091.652566083692 21996.109174855963 22896.166848487348 0.9871068654401814 0.9749447004977497 1.0013499283480876 0.9603276145884899 0.964044149784051 1.0226146275563779 1.0117657185850335 0.9808303419389222 1.008537923351535 0.9606895914243022 1.0 14.48281846994331 -7.2548876910599684 24.99374733615001 1.0039981405655134 0.977774556885606 0.16907332863434643 0.019068535531959557 371.6137093453158 1417649.8487898393 0.002018205901756593 0.003450517729536118 5.560480331962048e-08 7.2548876910599684 -0.026223583679907403 ETGLSYTEDDKKAS(ph)PEHR ddPTM_A549_PD325901_60min_R1 4 ETGLSYTEDDKKASPEHR 18 2 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 ETGLSYT(0.001)EDDKKAS(0.999)PEHR;ETGLSYTEDDKKAS(1)PEHR;ETGLSYTEDDKKAS(1)PEHR;ETGLSYT(0.004)EDDKKAS(0.996)PEHR 198.6 2.7375e-49 486348000.0 41690.5 37830.4 42789.4 42408.4 47350.3 46144.200000000004 46439.6 45117.200000000004 46711.299999999996 47483.7 48815.0 True False 45922.888869076 41018.50057380037 45693.34599756499 45027.87055153558 44024.5782776671 45768.41693426077 48206.88439072422 44217.302052241306 44748.18650392142 44485.571078381065 42811.064463780574 1.0726873868770097 0.9581284905565296 1.067325621772916 1.0517811485306676 1.0283457986641091 1.0690791623035256 1.1260379762691644 1.0328475268268662 1.0452481633989668 1.0391138747791981 1.0 15.385696087019001 -10.320399484857457 0.835500900493179 1.0016991763304974 1.0495160663149512 0.053557490332828306 0.039883314352396525 0.7800890752400897 1.0357791522858515 0.021032462951112774 0.007422586030387532 4.7819002787523495e-11 10.320399484857457 0.04781688998445377 ETGQEASGDQRS(ph) ddPTM_A549_PD325901_60min_R1 1 ETGQEASGDQRS 12 1 O60583-2 O60583-2 CCNT2 Cyclin-T2 1 ETGQEASGDQRS(1) 72.434 0.0015532999999999999 2826600.0 429.37 449.66 394.7 473.81 494.36 346.94 661.28 546.61 452.9 575.99 621.18 True False 472.9593263145121 487.55442628190724 421.48671552391227 503.07616759941607 459.63785904941506 344.11463566759056 686.4453722663006 535.7074347427503 433.86618800217514 539.6218931009316 544.7787979844555 0.8681676454082695 0.894958519101213 0.7736841394769897 0.9234503425255742 0.843714661345044 0.6316593761371186 1.2600442139194399 0.9833485383879346 0.7964079909265391 0.990533947167909 1.0 9.089526746579377 ETGQTRS(ph)PS(ph)PK ddPTM_A549_PD325901_60min_R1 3 ETGQTRSPSPK 11 1 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 2 ET(0.017)GQT(0.459)RS(0.886)PS(0.638)PK;ET(0.001)GQT(0.047)RS(0.954)PS(0.998)PK;ET(0.036)GQT(0.537)RS(0.55)PS(0.878)PK 66.023 0.016952000000000002 78073000.0 10081.2 10033.4 10648.8 9483.7 11298.0 9416.5 8635.9 10305.9 10939.6 10598.3 10193.1 True False 11104.636002612802 10878.949830220361 11371.491604436385 10069.486609954582 10504.46745598408 9339.815146030622 8964.543900245804 10100.340739677848 10479.84665548376 9929.12152928281 8939.413319384656 1.2422108259087845 1.2169646308477449 1.2720624047864408 1.1264147042087673 1.1750734730215109 1.044790615708272 1.0028112114255479 1.1298661756444106 1.1723192877499862 1.1107128817673104 1.0 13.125964437212987 -2.0000000000000004 0.08501174682196821 0.9349636809396479 1.7615330125421327 0.4447840273078949 0.06531423670289431 105.23225262893041 0.6288674867394016 0.8421334718712113 10.189369269250076 0.00999999999999999 2.0000000000000004 0.8265693316024848 ETGVDLTK ddPTM_A549_PD325901_60min_R1 1 ETGVDLTK 8 0 P38646;A0A3B3ITN1 P38646 HSPA9 Stress-70 protein, mitochondrial 0 57.59 0.045366000000000004 3811700.0 2663.0 2695.5 2299.9 2316.9 2869.9 2375.5 2273.9 2588.2 2684.5 2623.3 3032.8 False True 2933.3457996030133 2922.6592448580723 2455.9850444222097 2460.0096509383225 2668.3281246175156 2356.1547155945154 2360.4345088258233 2536.576320596378 2571.6798006002173 2457.6643903048216 2659.7848265032003 1.1028507909263705 1.0988329641313395 0.9233773423886605 0.9248904747578695 1.0032120260365374 0.8858441074318537 0.8874531824174173 0.9536772656648307 0.9668751302642725 0.9240087265013445 1.0 11.377093822759557 -5.750471441470498 24.883342888565423 0.9632365440633512 1.1008419854286715 0.6582511857340896 0.04198808577551021 108.04709343538889 245124.969886766 0.006345126498642054 0.024090556552293228 1.7763500744653468e-06 5.750471441470498 0.13760544136532027 ETHSLFFR ddPTM_A549_PD325901_60min_R1 1 ETHSLFFR 8 0 U3KQ84;A0A0C4DGS1;P39656-2;P39656-3;P39656 U3KQ84 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit 0 77.282 0.0048325 1908000.0 0.0 124.51 193.54 82.915 246.65 215.79 201.6 206.77 154.1 125.84 223.14 False True 0.0 135.00289466788297 206.674788250565 88.03647123637232 229.32615489630663 214.03267778494651 209.27199831975295 202.64581014207297 147.62371289718513 117.89444092401125 195.69519460100366 0.0 0.6898631054438298 1.0561055864041387 0.44986526836219415 1.1718537870276886 1.0937043100180897 1.069377297416171 1.0355175585953487 0.7543553289500549 0.6024391205128069 1.0 7.612464520034694 -5.351104535439783 3.299618359808676 0.9166709127430914 2.271462704876427e-16 0.5995938077077707 0.2152304069510997 0.12853253523044716 2.238443204239164 0.026649377049282046 0.25715577700670234 4.455489910697263e-06 5.351104535439783 -0.9166709127430912 ETIELS(ph)PTGRPK ddPTM_A549_MK2206_60min_R1 2 ETIELSPTGRPK 12 1 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-4 A0A087WSW7 HELLS Lymphoid-specific helicase 1 ETIELS(0.753)PT(0.247)GRPK;ETIELS(0.995)PT(0.005)GRPK 137.8 5.520000000000001e-09 137263000.0 6977.3 8776.6 7770.7 6760.900000000001 11454.6 8814.2 9230.0 9572.3 13389.4 10032.9 12146.3 True False 8154.897661392922 9223.291452110454 8872.702107140194 8417.320803508332 9769.643513816869 9746.912793607564 10906.971524944822 10929.202838939289 10356.722278478195 7766.460921848334 9130.038489173836 0.8931942259676987 1.0102138630682878 0.9718143157513756 0.9219370557407149 1.070055019527186 1.0675653563963834 1.194624922762158 1.1970598866476692 1.1343569132549582 0.8506493078925793 1.0 13.156405226801834 -6.8314059068298345 6.022039001388024 1.086380754903964 0.9554616696615726 0.27957669488149794 0.09441958315813685 0.16523646378879142 10.63193526401704 0.011407647149782653 0.021879504455604996 1.474327930622773e-07 6.8314059068298345 -0.13091908524239126 ETIELS(ph)PTGRPK ddPTM_A549_PD325901_60min_R1 2 ETIELSPTGRPK 12 1 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-4 A0A087WSW7 HELLS Lymphoid-specific helicase 1 ETIELS(0.77)PT(0.23)GRPK;ET(0.012)IELS(0.975)PT(0.013)GRPK 102.65 5.7848e-05 249260000.0 8150.700000000001 11787.9 7899.299999999999 8723.599999999999 8326.4 7303.4 8031.400000000001 8487.7 11827.099999999999 8808.8 13485.9 True False 8978.153063771797 12781.307702638642 8435.394000349737 9262.43695926693 7741.582388520605 7243.923531834554 8337.039321950715 8318.40616502816 11330.048116848146 8252.610864680782 11827.219794163644 0.7591093443788226 1.0806688237032518 0.7132186724484765 0.7831457536485157 0.6545563981436134 0.612478981358679 0.7049027131519766 0.7033272662382607 0.9579637745837076 0.6977642259386422 1.0 13.529823361040823 -8.813103564055998 6.528874254665657 0.9810200907156581 0.7528495961543193 0.04929061916041011 0.14305071943415743 0.13995712250823666 13.110516723552742 0.02101411559188025 0.022399400654557373 1.5377878879080545e-09 8.813103564055998 -0.22817049456133875 ETIEQEKQAGES(ph) ddPTM_A549_MK2206_60min_R1 2 ETIEQEKQAGES 12 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 ETIEQEKQAGES(1);ETIEQEKQAGES(1) 67.726 0.0038164 8901800.0 4815.5 6600.6 5790.5 5035.1 6767.6 4640.6 4816.6 4472.0 7653.5 9381.9 8362.1 True False 5628.238672328497 6936.54234655792 6611.679971095943 6268.69972603423 5772.095004985508 5131.6652118190295 5691.713872919738 5105.919694925618 5919.994470128075 7262.522273987463 6285.559787780688 0.89542361577245 1.1035679526973494 1.0518840317053768 0.9973176515194025 0.9183104130528883 0.8164213506957864 0.905522191354316 0.8123253723322584 0.9418404517663991 1.1554296704179028 1.0 12.617825520491925 -6.598937701024827 4.849361862385099 0.9394826747803703 1.0255906197964275 0.12117344815985065 0.09862018143744171 0.27366873255781576 11.856707368732584 0.011825340592147243 0.025260269529639993 2.51803811112489e-07 6.598937701024827 0.08610794501605723 ETIQGTGSWGPEPPGPGIPPAYS(ph)SPRR ddPTM_A549_MK2206_60min_R1 2 ETIQGTGSWGPEPPGPGIPPAYSSPRR 27 1 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 ETIQGTGSWGPEPPGPGIPPAY(0.201)S(0.4)S(0.4)PRR;ETIQGTGSWGPEPPGPGIPPAY(0.056)S(0.472)S(0.472)PRR 55.702 0.0018779 3508000.0 1093.9 1239.7 1100.4 878.85 1613.2 983.56 785.95 922.89 1417.4 1389.2 1435.8 True False 1278.5235767127288 1302.7954348131773 1256.4532665907916 1094.1682894530754 1375.9004169931184 1087.6396663657115 928.7469414984154 1053.712483732089 1096.3611631226934 1075.3787551586977 1079.2512339359141 1.1846394393732493 1.207128974096255 1.164189789256613 1.013821671032759 1.274865734436417 1.0077724557230345 0.8605474909779574 0.9763366031923002 1.0158535182993316 0.9964118838547963 1.0 10.075815026933038 -7.380609807352251 7.877408315535117 0.9923169853211894 1.1618930540267416 0.6422185288410007 0.07106762040909727 0.15414570771841776 9.428889654106108 0.010490523145036589 0.016787136076127498 4.162844540349376e-08 7.380609807352251 0.1695760687055522 ETIQGTGSWGPEPPGPGIPPAYS(ph)SPRR ddPTM_A549_PD325901_60min_R1 1 ETIQGTGSWGPEPPGPGIPPAYSSPRR 27 1 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 ETIQGTGSWGPEPPGPGIPPAY(0.001)S(0.499)S(0.499)PRR 70.525 6.7324e-05 6040600.0 1582.4 1532.9 1228.3 1492.2 1706.9 1729.9 1633.5 1645.0 1672.2 1651.5 2041.6 True False 1743.044083098689 1662.0828627130172 1311.65982436793 1584.3698049679163 1587.0132324853273 1715.812267946518 1695.663736385498 1612.1891845224638 1601.9232492321428 1547.224008153247 1790.496142768707 0.9734978151940383 0.9282806161999769 0.7325678023185599 0.8848775303799034 0.8863538963179631 0.9582887262149011 0.947035682391046 0.9004147766716097 0.8946812064923149 0.864131438876333 1.0 10.806143695353782 -7.16349058389108 4.33387811617555 0.9451643748774584 0.8741582331111798 0.07462887261492401 0.0655829693342526 0.3005606114222454 9.797680253391578 0.010027514889240613 0.017693402185016353 6.862927580325039e-08 7.16349058389108 -0.07100614176627862 ETKAEDEDIVLT(ph)PDGTR ddPTM_A549_MK2206_60min_R1 2 ETKAEDEDIVLTPDGTR 17 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52 Q8TEW0-2 PARD3 Partitioning defective 3 homolog 1 ETKAEDEDIVLT(1)PDGTR;ETKAEDEDIVLT(0.999)PDGT(0.001)R 106.35 4.2213999999999995e-09 16895200.0 4737.9 5316.0 4372.6 3840.7 6241.8 4484.6 3718.2 3816.5 5809.0 5616.1 6183.5 True False 5537.541689466349 5586.56169352815 4992.700430293434 4781.671672415578 5323.639488462461 4959.157395363444 4393.748810839632 4357.500562541062 4493.270775066832 4347.4191094491525 4647.966294081853 1.1913902423339797 1.2019367912889962 1.0741688115618484 1.0287664259751557 1.1453696416088313 1.0669520993897532 0.9453056525891956 0.9375069195508938 0.966717590183046 0.9353379164957842 1.0 12.182383891369831 -7.57237486982277 4.114637678527165 0.9771786980823445 1.1229997986793538 0.7199442104907466 0.050306425435343666 0.10514329402543295 3.7743851430577386 0.008105936118380284 0.012359367728673043 2.676856745777656e-08 7.57237486982277 0.14582110059700937 ETKAEDEDIVLT(ph)PDGTR ddPTM_A549_PD325901_60min_R1 2 ETKAEDEDIVLTPDGTR 17 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52 Q8TEW0-2 PARD3 Partitioning defective 3 homolog 1 ETKAEDEDIVLT(0.999)PDGT(0.001)R;ETKAEDEDIVLT(1)PDGTR 116.24 5.720599999999999e-10 21557000.0 8164.0 8622.3 7642.0 6960.0 8838.099999999999 8899.7 7488.3 7944.9 8931.4 9122.5 9452.6 True False 8992.803269980848 9348.931480964475 8160.632075079143 7389.903392693133 8217.342345789773 8827.223793886134 7773.271354254994 7786.432736846518 8556.044317780146 8546.503793144411 8289.990124968395 1.0847785262006127 1.1277373482999313 0.9843958740674923 0.8914248728036098 0.9912366868858123 1.0648051036031587 0.9376695553403483 0.9392571787745287 1.0320934269885835 1.0309425782551211 1.0 13.01715466784661 -5.764226541008675 24.999401842199863 0.9971407113162905 1.1062579560056154 0.4636773886041464 0.048742450015439975 47.99484548688807 430509.70804804255 0.006970930809586036 0.023175724103382356 1.7209706309857474e-06 5.764226541008675 0.10911724468932493 ETKALSLARALEEALEAKEELER ddPTM_A549_MK2206_60min_R1 2 ETKALSLARALEEALEAKEELER 23 3 P35749-3;P35749-2;P35749;P35749-4 P35749-3 MYH11 Myosin-11 0 ; 35.973 0.047758 6935600.0 798.3499999999999 895.29 910.36 777.53 1085.89 876.37 796.23 760.3499999999999 1378.23 1072.97 1055.29 False True 933.0919622164789 940.8564369072272 1039.4627369807276 968.0248849046479 926.1570194697844 969.1068917126759 940.8946844319408 868.131940974216 1066.0631055810568 830.5853317899714 793.2323684776651 1.1763160447010323 1.1861044434090295 1.3104139194113025 1.2203547451832262 1.1675734075844915 1.2217187929087425 1.1861526607110884 1.094423242763397 1.3439480635756151 1.0470895601297667 1.0 9.631599738861183 -11.035374448882472 1.320943289323741 0.9996198545118705 1.2244442327186276 0.5364396813291356 0.06646486121865582 0.26139226742075017 0.8105610965269765 0.05242978679847945 0.011676241645320076 9.217763285039743e-12 11.035374448882472 0.22482437820675705 ETKALSLARALEEALEAKEELER ddPTM_A549_PD325901_60min_R1 1 ETKALSLARALEEALEAKEELER 23 3 P35749-3;P35749-2;P35749;P35749-4 P35749-3 MYH11 Myosin-11 0 34.346 0.054515 3990500.0 715.69 845.55 826.25 575.83 1080.7 856.52 673.77 899.99 878.52 1148.9 904.01 False True 788.3463219368682 916.8074659579828 882.3242936448764 611.3977112951851 1004.795360212604 849.5447850983006 699.410686051091 882.0389934215037 841.5988595355949 1076.3582579275 792.8225009915452 0.994354122077667 1.1563842661016501 1.1128900763303207 0.7711659426044786 1.267364837597261 1.07154474555883 0.8821781485469592 1.112530222487858 1.0615224195618154 1.3576282920595093 1.0 9.630854097819133 ETKLEST(ph)SPK ddPTM_A549_MK2206_60min_R1 1 ETKLESTSPK 10 1 Q03111 Q03111 MLLT1 Protein ENL 1 ET(0.001)KLES(0.037)T(0.481)S(0.481)PK 59.75 0.0033954000000000002 26492000.0 8779.3 10780.0 9795.8 10063.0 12024.0 10243.0 8836.8 8447.0 14976.0 16239.0 13795.0 True False 10261.031206722782 11328.655954897189 11184.991738340668 12528.43545174524 10255.285528096481 11326.907461246885 10442.332174608053 9644.388117852572 11583.959911757769 12570.598621524685 10369.320777368672 0.9895567344312238 1.0925166843736085 1.0786619469572414 1.2082214178472417 0.9890026307681525 1.0923480625624171 1.0070410973685693 0.9300887034859326 1.1171377721325857 1.2122875636136519 1.0 13.34003377580138 ETKLESTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 ETKLESTSPK 10 1 Q03111 Q03111 MLLT1 Protein ENL 1 ET(0.001)KLES(0.146)T(0.113)S(0.74)PK 48.70399999999999 0.008542200000000002 30109000.0 5269.9 6824.0 6473.2 6730.5 7896.8 6602.2 5856.8 5471.6 9349.1 10996.0 9021.7 True False 6159.330283315116 7171.312452339376 7391.197096778907 8379.472802143626 6735.191180827708 7300.8404218143305 6920.9047483528475 6247.216056072228 7231.543777444883 8511.995962946336 6781.362903746793 0.9082732145055981 1.0575031235059151 1.089927969006816 1.2356620521685775 0.9931913800257506 1.0766037042171153 1.0205772566055942 0.9212331126860293 1.0663850143529938 1.2552043127264794 1.0 12.72735953691407 -7.769415710552755 23.17690731372277 1.0213998653599898 1.066353130091398 0.0 0.10741879682013442 170.02005389567253 494029.79668334476 0.012715755896484741 0.017759974935376083 1.7005299666361384e-08 7.769415710552755 0.04495326473140815 ETKLESTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ETKLESTSPK 10 1 Q03111 Q03111 MLLT1 Protein ENL 1 ETKLES(0.018)T(0.066)S(0.916)PK 64.798 0.0016382000000000002 56023000.0 8216.6 9516.4 9409.3 9762.9 11099.0 11225.0 9274.5 9669.9 10145.0 9243.4 11691.0 True False 9050.74318325878 10318.380425808704 10047.871680717384 10365.932159845372 10319.444529471344 11133.587321636887 9627.44617270113 9477.026258610202 9718.640930187823 8659.770146511484 10253.081115355082 0.8827339880988875 1.006368750009773 0.9799855836183354 1.0110065494674847 1.0064725338041924 1.0858772301101913 0.9389807867883735 0.924310083182444 0.9478751626799403 0.8446017396217177 1.0 13.323769893366467 -6.025630869674246 0.0015461372459896607 1.3360087844826818 0.616911318186062 0.0 0.06571615244801321 3312543.531337177 974.6274895083002 224596.95401816085 228707.50713448072 9.426904996564523e-07 6.025630869674246 -0.7190974662966197 ETLQQHK ddPTM_A549_PD325901_60min_R1 1 ETLQQHK 7 0 P14625 P14625 HSP90B1 Endoplasmin 0 94.262 0.012946000000000001 9211200.0 3301.3 4076.0 3822.8 3613.8 4075.0 4157.7 3368.8 3471.8 4307.8 4034.8 4262.6 False True 3636.4455457113872 4419.498824723244 4082.238196363852 3837.016218464721 3788.7860579868225 4123.841069681042 3497.001527478095 3402.5522254255884 4126.75814677803 3780.042039416722 3738.3272228477103 0.9727467203743835 1.1822129421181713 1.0919959524715346 1.0263992394817256 1.0134977042220168 1.1031246929046685 0.9354455399477355 0.9101804156228085 1.1039050090522649 1.0111586851771728 1.0 11.868177141096123 -6.257517176874845 22.21818090818243 1.0321157366960012 1.0923079994403455 0.11018489232379047 0.0730112975839595 128.36852255570807 727143.5756760485 0.010575893380305968 0.026801121301918803 5.526915478893703e-07 6.257517176874845 0.060192262744344305 ETMQS(ph)LNDR ddPTM_A549_MK2206_60min_R1 3 ETMQSLNDR 9 0 P05783;F8VZY9;CON__Q92764;Q92764;CON__Q497I4;C4AM86 P05783 KRT18;KRT35 Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5 1 ETMQS(1)LNDR;ET(0.001)MQS(0.999)LNDR;ET(0.003)MQS(0.997)LNDR 88.18700000000001 0.0011256999999999999 21168600.0 3131.78 3146.3199999999997 3280.6800000000003 3028.99 4637.5 3371.14 2949.39 2912.7300000000005 4134.0 4603.4 4281.6 True False 3660.3478993302756 3306.454248980719 3745.929755215447 3771.0926859765286 3955.329893259102 3727.8717972183767 3485.2559854774627 3325.6183973615157 3197.655600641467 3563.4887427998483 3218.3605538515208 1.1373330731852942 1.0273722268388399 1.1639248283516794 1.171743383898841 1.2289890542331017 1.1583139100922384 1.082929002875871 1.0333268574838936 0.993566614783022 1.1072372666683665 1.0 11.652110245314844 -8.162067184879062 2.0446884429554113 0.9975445671178509 1.1473974994396932 0.43621773613241954 0.05639632296523387 0.14333437754888131 1.1753862723335184 0.008223253661320642 0.01092096911586321 6.885457708307613e-09 8.162067184879062 0.14985293232184227 ETMQS(ph)LNDR ddPTM_A549_PD325901_60min_R1 3 ETMQSLNDR 9 0 P05783;F8VZY9;CON__Q92764;Q92764;CON__Q497I4;C4AM86 P05783 KRT18;KRT35 Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5 1 ETMQS(1)LNDR;ETMQS(1)LNDR;ET(0.131)MQS(0.869)LNDR 107.85 0.00046873 23280900.0 3137.03 2896.29 2806.28 3594.04 3501.5899999999997 3101.08 3035.7 3094.25 3231.79 3656.4599999999996 3730.35 True False 3455.498976240571 3140.370522830637 2996.7310363325187 3816.0356881429375 3255.6503982297104 3075.825832639796 3151.225224698779 3032.532756357832 3095.9691051524596 3425.590491584633 3271.5405986369738 1.0562298929379756 0.9599057166336293 0.9159999535329167 1.166433847629101 0.9951428998271078 0.9401765742785773 0.963223634153181 0.9269433359993393 0.9463336956424558 1.0470878744441812 1.0 11.675754458797273 -7.0015838399147965 24.999190644767186 0.9670104690731215 1.0208243990981372 0.12658629070491767 0.06565953015326638 95.01671511210706 1499788.6783683337 0.008852725963480815 0.016569577559891566 9.963597157810752e-08 7.0015838399147965 0.053813930025015666 ETMQSLNDR ddPTM_A549_MK2206_60min_R1 3 ETMQSLNDR 9 0 P05783;F8VZY9;CON__Q92764;Q92764;CON__Q497I4;C4AM86 P05783 KRT18;KRT35 Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5 0 ;; 57.248999999999995 0.0084229 28492000.0 3561.8 4027.5 3283.8 3199.7 4026.9 3337.7 2941.3 3395.2 4981.8 5340.1 4841.200000000001 False True 4162.944762350671 4232.482547156625 3749.492218130536 3983.626643639993 3434.5483444021734 3690.893198614052 3475.6961371961197 3876.47999736392 3853.4302542998676 4133.767701139479 3638.996429677218 1.1439815462308458 1.1630906017492435 1.0303643574783938 1.0947047408874055 0.9438174537332042 1.0142612860275428 0.9551249099478827 1.0652607311592683 1.0589266378152697 1.1359636594933806 1.0 11.829324920373269 -5.771794980850644 10.529483646602694 1.0240543403141538 1.1536035375826872 0.4139482933742311 0.054368395471895106 0.10891144530669361 105.49747588962569 0.006000385195386876 0.019705803673084995 1.6912391333086368e-06 5.771794980850644 0.12954919726853342 ETMQSLNDR ddPTM_A549_PD325901_60min_R1 2 ETMQSLNDR 9 0 P05783;F8VZY9;CON__Q92764;Q92764;CON__Q497I4;C4AM86 P05783 KRT18;KRT35 Keratin, type I cytoskeletal 18;Keratin, type I cuticular Ha5 0 ; 74.267 0.0013146 45835000.0 6864.1 7743.1 6836.4 5977.9 7256.299999999999 5797.6 5911.299999999999 7105.1 6614.2 7365.9 8216.2 False True 7560.938378916655 8395.638211411811 7300.359214612811 6347.141306204061 6746.642520876022 5750.386267788154 6136.25775628748 6963.383206656876 6336.228175500082 6900.815816927639 7205.659486783037 1.0493055344601403 1.1651450123075466 1.0131424095190005 0.8808550165111589 0.936297716156451 0.79803747017685 0.851588639116641 0.9663769457090561 0.8793404943880977 0.957693855723469 1.0 12.814914761525765 -6.002201370661527 4.6623602896529555 0.9232333247919008 1.1060015938245513 0.6156683320278971 0.06071165861268452 0.10728897857959041 6.248399794049254 0.009662014205219735 0.029579067338214315 9.949439816383598e-07 6.002201370661527 0.18276826903265053 ETNLDS(ph)LPLVDTHSK ddPTM_A549_MK2206_60min_R1 4 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 1 ET(0.001)NLDS(0.999)LPLVDTHSK;ETNLDS(0.996)LPLVDT(0.004)HSK;ET(0.002)NLDS(0.998)LPLVDTHSK;ETNLDS(1)LPLVDTHSK 174.87 1.9382000000000005e-27 386824600.0 7882.3 8247.0 7750.0 7056.8 10542.300000000001 8287.1 7874.299999999999 8997.4 12675.9 12762.900000000001 11726.899999999998 True False 9212.639536267248 8666.737074214952 8849.06653587662 8785.716316791795 8991.541635300364 9164.03542146823 9304.958383409856 10272.809003381883 9804.828889252818 9879.75202578099 8814.787084024985 1.0451346638835202 0.9832043578138894 1.0038888576122003 0.9967020454429495 1.020052049991736 1.0396207343540023 1.0556078433559906 1.165406368351116 1.112316020317959 1.1208157306131692 1.0 13.105710007181901 -7.392939714816431 2.2113945498717436 1.0644867315013293 1.006103768838442 0.3718322643481137 0.044834739226594394 0.40589248772651937 3.8869436701605373 0.008538149928013926 0.014666807887259466 4.046320554890587e-08 7.392939714816431 -0.05838296266288734 ETNLDS(ph)LPLVDTHSK ddPTM_A549_PD325901_60min_R1 5 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 1 ETNLDS(1)LPLVDTHSK;ET(0.457)NLDS(0.543)LPLVDTHSK;ETNLDS(1)LPLVDTHSK;ET(0.006)NLDS(0.994)LPLVDTHSK;ETNLDS(1)LPLVDTHSK 225.69 1.2906e-54 830657600.0 14418.92 16584.91 17594.170000000002 15556.52 18832.82 15718.73 18397.82 18218.38 17325.31 16652.309999999998 16637.1 True False 15882.718143752116 17982.578570446705 18788.216178539038 16517.410908979684 17510.067692901932 15590.721874408326 19097.959107773397 17855.000118857373 16597.187471088462 15600.880304698996 14590.842171266284 1.0885401923564029 1.2324565202863862 1.2876718120862574 1.132039584494128 1.2000724486887038 1.068527895196557 1.3089003968107453 1.223712785682734 1.1375071621138682 1.069224114795908 1.0 13.832775536365533 -9.907001357952575 0.7343163596405833 1.008988953989831 1.194279064824392 0.37772904444954625 0.07444819544323966 0.3756894514052711 0.4157612704206414 0.03324496322945456 0.015353216726511887 1.2387927130655773e-10 9.907001357952575 0.18529011083456104 ETNLDS(ph)LPLVDTHSKR ddPTM_A549_MK2206_60min_R1 3 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 1 ET(0.002)NLDS(0.998)LPLVDTHSKR;ET(0.001)NLDS(0.999)LPLVDTHSKR;ETNLDS(1)LPLVDTHSKR 99.86 6.9713e-07 56043700.0 3838.29 3914.88 3728.4700000000003 3225.71 6076.24 3910.56 3493.32 3257.98 7018.4 6693.9 7660.7 True False 4486.099514819177 4114.130670195542 4257.223110583215 4016.0090948076245 5182.433145146457 4324.372863580359 4128.011025733504 3719.8086421452954 5428.74360608178 5181.743340884542 5758.3367654359 0.7790616800578151 0.7144651029947372 0.7393147160369229 0.6974251868896412 0.8999878534811869 0.7509760265389773 0.7168755829828611 0.6459866440033939 0.9427624377003296 0.8998680612060884 1.0 12.491436449321863 -8.868568380745625 6.219270414938105 0.974866941510183 0.7454005829677186 0.6627685795133861 0.06441130022939809 0.07571832636564389 3.9226517512838974 0.01084549745575656 0.011503906858239531 1.353416975027433e-09 8.868568380745625 -0.22946635854246444 ETNLDS(ph)LPLVDTHSKR ddPTM_A549_PD325901_60min_R1 2 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 1 ET(0.006)NLDS(0.993)LPLVDTHSKR;ET(0.006)NLDS(0.992)LPLVDT(0.001)HS(0.001)KR 71.527 0.00046055 29559000.0 3677.7 2849.2 3570.6 3829.7999999999997 4741.1 4881.5 3755.6 4561.8 4922.4 4318.2 4706.700000000001 True False 4051.0573966203556 3089.3120832682707 3812.9223877620525 4066.358047893128 4408.101491907073 4841.74668245617 3898.5214131431767 4470.811320337131 4715.528646107104 4045.548115051379 4127.80573822956 0.9814069880037227 0.7484150852005198 0.923716528723427 0.985113715559011 1.067904298664436 1.1729589495005701 0.9444537026142309 1.0830963480017566 1.1423814358399582 0.9800723124113244 1.0 12.011159361264456 -6.370669489505197 2.191571633215693 1.068253561844383 0.8633327957039916 0.4525482592410892 0.08190344740603356 0.18847592396479243 1.748561387296656 0.011696478570342159 0.03360331794534943 4.2592242894904373e-07 6.370669489505197 -0.20492076614039134 ETNLDSLPLVDT(ph)HSKR ddPTM_A549_MK2206_60min_R1 3 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 1 ETNLDS(0.003)LPLVDT(0.941)HS(0.056)KR;ETNLDSLPLVDT(0.835)HS(0.165)KR;ETNLDSLPLVDT(0.653)HS(0.347)KR 100.21 5.1015e-07 30382500.0 1118.66 1234.92 1230.31 1278.57 1973.91 1381.51 1191.4 1576.35 1686.69 2141.13 2193.94 True False 1307.4624593888482 1297.7721532302073 1404.7864580328219 1591.819707397189 1683.5504538227663 1527.700471227882 1407.8619582686088 1799.8024398694092 1304.6574080904584 1657.4472459206322 1649.1241483363708 0.7928223358488872 0.7869463039149565 0.8518379040474087 0.9652515906719392 1.0208755086881267 0.9263708088739222 0.8537028335246037 1.0913686769337785 0.7911214018705572 1.0050469806003737 1.0 10.68748429559471 -6.000079210367134 3.8179656117092238 0.92319699545689 0.7921597689380568 0.348868132275891 0.0823927517339386 0.23968490710643503 7.785989817516012 0.013158733093295552 0.04204846355883465 9.998176280212183e-07 6.000079210367134 -0.1310372265188332 ETNLDSLPLVDT(ph)HSKR ddPTM_A549_PD325901_60min_R1 3 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 1 ETNLDSLPLVDT(0.75)HS(0.25)KR;ETNLDSLPLVDT(0.791)HS(0.209)KR;ETNLDSLPLVDT(0.65)HS(0.35)KR 98.816 1.0088e-06 41817000.0 2859.31 2655.19 2704.1400000000003 2831.2 3323.3999999999996 2946.51 2742.49 3118.18 2805.7300000000005 3172.2200000000003 3268.68 True False 3149.585046287231 2878.952179690117 2887.659201714803 3006.076793878275 3089.9758491075845 2922.5145994722757 2846.8569576981126 3055.9854537351107 2687.8149252889 2971.9254878255483 2866.6530818697183 1.098697664606481 1.004290403292322 1.0073277509503815 1.0486364090898717 1.0779036600732337 1.0194866682529031 0.9930943425638745 1.0660464892186758 0.9376143009030676 1.0367231063366649 1.0 11.48515160697696 -8.759620966729502 24.995518069798766 0.9705400863931752 1.036572980200047 0.17672921157887722 0.03930520751383701 34.98791200831998 480932.73849853646 0.006287266371441505 0.006950894234578758 1.7393181675095077e-09 8.759620966729502 0.06603289380687172 ETNLDSLPLVDTHS(ph)KR ddPTM_A549_MK2206_60min_R1 1 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 1 ETNLDSLPLVDT(0.213)HS(0.787)KR 88.036 2.8151999999999997e-06 8725300.0 641.56 608.08 596.18 579.02 1075.3 763.22 578.45 794.78 1324.6 1021.4 942.09 True False 749.8396433639441 639.0286746803234 680.727288691474 720.8799259931952 917.124794441297 843.9834338155662 683.5468774219204 907.442498911669 1024.580214951545 790.665030606892 708.143052638728 1.0588815925960773 0.9024005422338521 0.9612849920011279 1.0179862999531044 1.2951123237371995 1.1918261863484518 0.9652666574569139 1.2814395276918957 1.4468548567040072 1.1165329203762788 1.0 9.46789701969519 -6.635730597187198 5.674828957430531 1.2051759198047387 0.9707847273588365 0.3419298684374049 0.1324270799094191 0.21881144580788514 10.09917138109358 0.02547751148261638 0.05359955794744248 2.313499461846842e-07 6.635730597187198 -0.23439119244590223 ETNLDSLPLVDTHS(ph)KR ddPTM_A549_PD325901_60min_R1 1 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 1 ETNLDSLPLVDT(0.188)HS(0.812)KR 104.63 2.1009e-07 16472000.0 730.78 747.9 731.2 715.1 837.88 865.81 767.08 848.3 990.6 521.03 1027.4 True False 804.9682476281977 810.9281577552787 780.8236290627937 759.270102890066 779.0301993290797 858.7591304183902 796.2716491622824 831.3799910215239 948.968526904294 488.1320768804641 901.036313225201 0.8933804729210814 0.8999949789510858 0.8665839740330622 0.8426631554640767 0.8645935662022229 0.9530793796140332 0.8837286993596071 0.9226931021743765 1.05319676130202 0.5417451768766423 1.0 9.815441439935872 -8.631606083358612 4.445380322314466 1.0249572072073299 0.8870969711655092 0.0 0.14850009958031102 0.06959114051441737 2.4188627567537453 0.005668321820850548 0.0064273320917452885 2.335575530936619e-09 8.631606083358612 -0.13786023604182063 ETNLDSLPLVDTHSK ddPTM_A549_MK2206_60min_R1 1 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 0 104.21 6.1750999999999995e-06 10209000.0 1731.6 2263.3 2211.3 1677.1 2527.8 1943.3 2013.7 2123.2 2456.7 3072.3 2542.1 False True 2023.8517464446124 2378.492302664084 2524.8955910689 2087.9895752878783 2155.963968556411 2148.9387161418604 2379.563224245002 2424.1701020272967 1900.2613725437561 2378.265296194982 1910.8264116092 1.0591499751880802 1.2447453563618267 1.3213631420043868 1.092715467298508 1.1282887631539325 1.1246122112851342 1.2453058057958577 1.2686500915516365 0.9944709582193044 1.2446265562093257 1.0 10.899981007778312 -8.776794490226084 24.971806551767152 0.9973890356881244 1.1870507687986283 0.03193481640801554 0.10667351535844369 122.42675587149905 199100.27894239686 0.013226570368591239 0.014106002649638459 1.6718815677687332e-09 8.776794490226084 0.18966173311050383 ETNLDSLPLVDTHSK ddPTM_A549_PD325901_60min_R1 2 ETNLDSLPLVDTHSK 15 0 P08670 P08670 VIM Vimentin 0 ; 156.57 1.9562999999999998e-19 53717000.0 8631.7 9026.1 9288.3 9360.4 10916.1 9515.8 8416.1 9519.900000000001 10554.3 10712.7 10327.9 False True 9507.983829678311 9786.761124100703 9918.659893085265 9938.570648989196 10149.3907945006 9438.30647975343 8736.379290966632 9330.018126282926 10110.739474566915 10036.298293759177 9057.633773952251 1.0497204973136767 1.0804986565305015 1.0950608227955887 1.0972590520904393 1.1205344627299902 1.0420278314735918 0.9645321845635362 1.0300723521317445 1.1162671981332655 1.1080485857820117 1.0 13.144918492941237 -7.289574967685954 23.548709067388916 1.0457773122612415 1.0890021705967758 0.21202537903440555 0.04318891151171731 543.6571756215275 455024.55449393153 0.0077770927094846145 0.012434742268065022 5.13363553306418e-08 7.289574967685954 0.043224858335534355 ETNLDSLPLVDTHSKR ddPTM_A549_PD325901_60min_R1 2 ETNLDSLPLVDTHSKR 16 1 P08670 P08670 VIM Vimentin 0 ; 94.544 2.094e-06 7653200.0 1043.54 955.36 1034.3899999999999 1307.54 1133.76 1369.75 1224.43 1333.6100000000001 1443.01 1296.51 1510.88 False True 1149.4794125864548 1035.8715400362114 1104.5899256923728 1388.3037761612038 1054.1286088596655 1358.5952101391654 1271.0263536838047 1307.0101023531943 1382.365307902447 1214.648137336219 1325.0513382574368 0.8674980201885045 0.7817595515947909 0.8336204747696865 1.0477358394180785 0.7955379376062067 1.0253151488649805 0.9592280064826169 0.9863845004466254 1.043254150228159 0.9166800577957922 1.0 10.371832541707422 -6.63409132730806 0.5646119366463607 1.0202054733721293 0.7970617179176964 0.3453891276479697 0.07639416232877547 0.7107138902626994 0.33896807571588194 0.01328719042011273 0.07882384554060816 2.3222484019493315e-07 6.63409132730806 -0.22314375545443288 ETNNSNAQNPS(ph)EEEGEGQDEDILPLTLEEK ddPTM_A549_MK2206_60min_R1 1 ETNNSNAQNPSEEEGEGQDEDILPLTLEEK 30 0 O43422-2;O43422 O43422-2 PRKRIR 52 kDa repressor of the inhibitor of the protein kinase 1 ET(0.074)NNS(0.068)NAQNPS(0.844)EEEGEGQDEDILPLT(0.014)LEEK 48.422 0.0031721999999999996 800250.0 0.0 307.2 215.42 203.93 201.77 220.25 202.46 167.66 403.16 491.56 202.39 True False 0.0 322.83516784271046 245.9697952462634 253.8928591547656 172.08990028310274 243.55670880988248 239.2443613153117 191.4263184372158 311.8449037142269 380.51625459675336 152.13097732016277 0.0 2.1220869906284583 1.6168291269740214 1.6689096699907664 1.1311956533411076 1.6009672264006585 1.57262094498885 1.2582994062698696 2.0498448718826205 2.5012411101254486 1.0 7.249170138207527 -5.246766702531937 24.426071911624383 1.5259180682622033 1.4642020084245198e-06 0.5225503172827064 0.4391844036539459 1136.2036502933108 1891431.9283108134 0.05543554391500606 1.6596273324117237 5.665435472918559e-06 5.246766702531937 -1.5259166040601948 ETPAAQS(ph)PTRGPSDTK ddPTM_A549_MK2206_60min_R1 3 ETPAAQSPTRGPSDTK 16 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ET(0.02)PAAQS(0.869)PT(0.11)RGPS(0.001)DTK;ET(0.04)PAAQS(0.905)PT(0.042)RGPS(0.01)DT(0.004)K;ET(0.007)PAAQS(0.829)PT(0.162)RGPS(0.001)DTK 79.51100000000001 9.131200000000001e-05 70268700.0 3451.94 3734.5 2993.9 2957.62 3984.24 3157.62 3635.62 3113.79 4367.4400000000005 4605.74 5035.280000000001 True False 4034.5430801697953 3924.5700986608126 3418.480038936907 3682.2370327726085 3398.163573890812 3491.7572525414807 4296.165093772465 3555.1792680819412 3378.2218133685465 3565.300135174647 3784.8810093417114 1.065962990702185 1.0369071283811369 0.9031935298625066 0.9728805274681659 0.897825734944793 0.9225540364210254 1.1350859071048258 0.9393107099819444 0.892556940371583 0.9419847351541297 1.0 11.88603222954124 -5.6189307184253225 6.239225637968397 0.9542039133246198 1.0587993705309526 0.24683811281292567 0.0648180199253644 0.2057057574546173 10.866447933341336 0.009348782848419734 0.03733040961492484 2.404746390716355e-06 5.6189307184253225 0.10459545720633279 ETPAAQS(ph)PTRGPSDTK ddPTM_A549_PD325901_60min_R1 2 ETPAAQSPTRGPSDTK 16 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ETPAAQS(0.5)PT(0.5)RGPS(0.001)DTK;ET(0.007)PAAQS(0.987)PT(0.006)RGPSDTK 99.86 4.6476000000000004e-07 102606000.0 7327.8 7052.7 6450.2 5997.1 7809.0 8089.700000000001 7325.700000000001 7614.0 7323.0 7393.1 7598.200000000001 True False 8071.71286155876 7647.055780452804 6887.949360203547 6367.527246597699 7260.522779587508 8023.820165331488 7604.483522276852 7462.13279693255 7015.2397764184725 6926.298404285659 6663.669568958263 1.2113014875707016 1.1475742759028003 1.0336570997292631 0.9555586723957472 1.0895682483131515 1.204114352054503 1.1411855650378036 1.11982335254044 1.0527592498130383 1.0394120435609253 1.0 12.702101148294059 -9.148422033010144 1.5517187176901954 1.0165664473609364 1.1089452550931207 0.21219078533052294 0.06971073194310867 0.3873944200717149 1.9216730769650114 0.01612540209930345 0.014924276204611522 7.105227155909048e-10 9.148422033010144 0.09237880773218432 ETPAATEAPS(ph)STPKAQGPAASAEEPKPVEAPAANSDQTVTVK ddPTM_A549_PD325901_60min_R1 1 ETPAATEAPSSTPKAQGPAASAEEPKPVEAPAANSDQTVTVK 42 2 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 ETPAAT(0.003)EAPS(0.332)S(0.332)T(0.332)PKAQGPAAS(0.001)AEEPKPVEAPAANSDQTVTVK 75.14 2.034e-07 5652200.0 404.66 246.28 318.46 280.72 382.95 565.25 499.2 496.16 339.8 551.76 474.28 True False 445.7407853050528 267.0348799197351 340.0726106555489 298.0594368386231 356.0529131057798 560.6467914080405 518.1973291727213 486.2636995700099 325.5193876863305 516.9217794360491 415.94656670863156 1.071629918314224 0.6419932301227327 0.8175872524842067 0.7165810724131118 0.8560063758266168 1.34788176242063 1.2458266773859823 1.1690532834969525 0.7825990493494208 1.2427600581642742 1.0 8.700254398680284 -7.013444418668468 24.767882874208464 0.9798767182334343 0.7984713604280267 0.2166290068496698 0.20372628279482372 904.6092347931977 1666513.2275059852 0.03171275976938863 0.056560747950154665 9.695173409126998e-08 7.013444418668468 -0.18140535780540756 ETPAATEAPSS(ph)TPK ddPTM_A549_MK2206_60min_R1 2 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 ETPAATEAPS(0.002)S(0.987)T(0.011)PK;ETPAATEAPS(0.002)S(0.989)T(0.009)PK 225.86 5.156399999999999e-47 17845300.0 6624.5 7484.0 7246.6 6314.7 9610.5 7429.700000000001 7036.5 7186.5 10842.0 9917.4 11018.1 True False 7742.553646524798 7864.903633251445 8274.27684630755 7861.80178347765 8196.80818095237 8215.905922564289 8314.94096806871 8205.208382733217 8386.304311116299 7677.052452066565 8282.001685909805 0.9348650169556507 0.9496380140361514 0.9990672738433032 0.9492634850404532 0.9897134161295361 0.9920193492041948 1.003977212684579 0.9907276880530903 1.0125938908445218 0.9269561566411605 1.0 13.01576378104936 -3.554256303254579 0.33261336007562187 1.0066007602073486 0.7237159331661566 0.09840291254809874 0.02773308823809364 7.050785531623159 0.22229133855712954 0.003976820238135729 1.0254374853941808 0.0002790896279625552 3.554256303254579 -0.282884827041192 ETPAATEAPSST(ph)PK ddPTM_A549_MK2206_60min_R1 4 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 ETPAATEAPS(0.006)S(0.144)T(0.851)PK;ETPAATEAPS(0.013)S(0.23)T(0.758)PK;ETPAATEAPSS(0.016)T(0.984)PK;ETPAATEAPS(0.079)S(0.189)T(0.733)PK 221.86 7.948100000000001e-47 913415000.0 11588.0 12273.3 11532.0 10659.2 17128.2 11492.5 11813.1 11970.2 17464.1 17737.8 17488.8 True False 13543.771100600696 12897.958546497186 13167.411005384407 13270.704478509671 14608.664469589346 12708.628721895911 13959.387358756827 13667.012507200054 13508.509234437017 13730.81866056288 13145.848293674899 1.0302698462690503 0.9811431151767525 1.0016402678037812 1.0094977655336892 1.1112759057639725 0.9667408628175517 1.0618856270746226 1.0396447761972054 1.0275874886626077 1.044498487569603 1.0 13.68231962075156 -6.534169986810049 24.99520389033712 1.0226714985013086 1.0026200427458383 0.0690254981681957 0.03698418371656587 510.1980371779895 1129412.5448879674 0.005051607766864593 0.010526358548738212 2.9230080619704237e-07 6.534169986810049 -0.020051455755470293 ETPAATEAPSST(ph)PK ddPTM_A549_PD325901_60min_R1 4 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 ETPAATEAPS(0.023)S(0.259)T(0.718)PK;ETPAATEAPS(0.036)S(0.141)T(0.823)PK;ETPAATEAPS(0.003)S(0.108)T(0.889)PK;ETPAATEAPS(0.045)S(0.162)T(0.793)PK 255.71 9.036499999999997e-70 1317068000.0 35875.8 37409.3 35983.5 35900.6 39496.3 37253.4 37163.200000000004 38672.200000000004 41077.9 40756.4 43346.7 True False 39517.88480563193 40561.91299894975 38425.55669636356 38118.09852582173 36722.216142838035 36950.02066172539 38577.46591248335 37900.852633246 39351.538715245195 38183.033948469245 38015.330697370846 1.0395249516628564 1.0669882980067047 1.0107910674842842 1.002703325909986 0.9659843928538482 0.9719768310283533 1.014787066291426 0.9969886342687331 1.0351491883238244 1.0044114636916732 1.0 15.214293720756466 -5.778464517074456 19.595955930840564 1.0079135768617271 1.0532564285175674 0.47777538318567647 0.02010273186789776 13.701392531880645 15771.995265985186 0.0033203593866601897 0.010408392667712126 1.6654648947977542e-06 5.778464517074456 0.04534285165584029 ETPAATEAPSSTPK ddPTM_A549_MK2206_60min_R1 2 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 ; 160.15 1.0551e-18 8475900.0 5177.700000000001 6025.9 5470.4 5121.3 6857.8 4689.6 4858.6 4826.4 6583.7 7528.299999999999 7563.9 False True 6051.569177388697 6332.592571300088 6246.184977788315 6376.018729903893 5849.026704472725 5185.850359295459 5741.3447292629335 5510.5569802301 5092.502462008523 5827.651801368577 5685.574876979985 1.064372435211533 1.1137998721887874 1.098602184113018 1.121437826053335 1.0287485137438839 0.9121065981018326 1.0098090084977602 0.9692172030908421 0.8956882236530346 1.0249890164957356 1.0 12.473090514208318 -6.999281004223408 4.015436929281241 0.953802506463139 1.09962545424271 0.6904675771848284 0.04021813787729332 0.08880761003849649 3.3006496381284878 0.006405039540238968 0.01202562885701714 1.0016569201348603e-07 6.999281004223408 0.14582294777957094 ETPAATEAPSSTPK ddPTM_A549_PD325901_60min_R1 1 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 193.23 1.4509e-26 10682000.0 4847.5 4440.9 5281.2 5400.2 5880.9 5570.1 5336.0 5465.9 5572.3 5409.9 6501.0 False True 5339.614631459108 4815.150228339907 5639.613990435486 5733.758089255959 5467.845872003611 5524.738952360769 5539.064399971238 5356.878336584401 5338.115609195229 5068.317990740689 5701.418213234405 0.9365414764811567 0.844553065264139 0.9891598510252315 1.0056722511508602 0.9590325893496788 0.9690113487090775 0.9715239599708186 0.9395694432921546 0.9362785555362593 0.8889574139598928 1.0 12.477105115291105 -4.5708596262668655 0.007050745267987871 1.8584313752850548 1.0177307307340268e-07 0.0 0.04856210759360699 17367.04509854515 14.972008574706937 1847.2632407974015 2106.344465208334 2.6862125495983734e-05 4.5708596262668655 -1.8584312735119817 ETPDSYRDS(ph)PHSER ddPTM_A549_MK2206_60min_R1 4 ETPDSYRDSPHSER 14 1 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8;A0A494C1G2;F6RJN6;A0A494C1B5;A0A494C0L9;A0A494C0K4;Q02297-3;Q02297-12;A0A494C043 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 1 ETPDS(0.001)Y(0.001)RDS(0.959)PHS(0.039)ER;ETPDSYRDS(0.997)PHS(0.003)ER;ETPDS(0.017)Y(0.008)RDS(0.963)PHS(0.012)ER;ETPDSYRDS(0.998)PHS(0.002)ER 125.73 2.0351e-07 86047000.0 2155.6400000000003 1987.3899999999999 2100.2400000000002 2332.76 3484.2100000000005 3044.01 3231.78 3381.37 4560.66 4595.6900000000005 4947.55 True False 2519.459331661967 2088.5396621709765 2398.085613072197 2904.286304721576 2971.6873245050792 3366.1251177496965 3818.9525931620947 3860.6895525113237 3527.677791877484 3557.5204371546783 3718.936789566538 0.6774676404101032 0.5615959023639138 0.644830968840346 0.780945326328089 0.7990690599641639 0.905131038310021 1.0268936551640648 1.0381164754782797 0.9485715922288246 0.95659610218041 1.0 11.860674511462785 -6.829172136322424 1.0773163112525759 0.9843234135603224 0.6118190103116237 0.9200749257855769 0.04475631793992315 0.09913114013706524 0.223492228436599 0.007441112493854334 0.022103319050371516 1.481930592893535e-07 6.829172136322424 -0.3725044032486987 ETPDSYRDS(ph)PHSER ddPTM_A549_PD325901_60min_R1 3 ETPDSYRDSPHSER 14 1 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8;A0A494C1G2;F6RJN6;A0A494C1B5;A0A494C0L9;A0A494C0K4;Q02297-3;Q02297-12;A0A494C043 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 1 ETPDSYRDS(0.986)PHS(0.014)ER;ET(0.001)PDS(0.012)Y(0.028)RDS(0.53)PHS(0.43)ER;ETPDSYRDS(1)PHSER 158.92 1.8764e-19 93663000.0 3046.96 2990.08 2847.87 2925.79 3806.35 3329.71 2916.96 3084.17 2651.16 2692.26 2948.12 True False 3356.285136146601 3242.0645352866723 3041.1435838335065 3106.509403348801 3539.005107194635 3302.593945721831 3027.96650902176 3022.653809865439 2539.7409648572443 2522.2702441360334 2585.5199296724527 1.2981083988672997 1.2539313652466775 1.1762212887752812 1.201502787774817 1.3687788930108826 1.2773422891929598 1.1711247994152414 1.169070009933501 0.9822940971021609 0.9755369568764329 1.0 11.336238710090157 -8.518757073938755 1.7540779377507256 0.9897197469984326 1.2555237852932537 0.8199537688881526 0.05389664103401569 0.09915715056447409 0.5963347854827417 0.01008273491234149 0.011856216115074696 3.0286070297432296e-09 8.518757073938755 0.26580403829482113 ETPGTLSSDTNDS(ph)GVELGEESR ddPTM_A549_PD325901_60min_R1 2 ETPGTLSSDTNDSGVELGEESR 22 0 E5RFM9;R4GMT7;O75410-7;H0YAY0;E7EVI4;E7ET87;O75410-3;E5RJU4;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 ETPGTLSSDT(0.001)NDS(0.999)GVELGEESR;ETPGTLSSDT(0.005)NDS(0.995)GVELGEESR 162.85 5.9166000000000005e-33 4956700.0 1834.63 1753.35 1495.1100000000001 1299.52 2143.0 1522.46 1416.85 1673.49 1129.63 1983.69 2181.01 True False 2020.8802870167776 1901.1109578823607 1596.5771554267963 1379.7883989759464 1992.4830729486534 1510.061590530004 1470.7690020800694 1640.1109291224914 1082.1555794941416 1858.4394748613465 1912.75959656151 1.0565260216964178 0.9939100351658987 0.8346982852925678 0.7213600713107574 1.0416798203655384 0.7894675280911307 0.7689251721565067 0.8574579534568023 0.5657561888276439 0.9716011767512172 1.0 10.901439845934695 -7.348633271177849 24.98408110278787 0.7928653371938608 0.9163632245688579 0.09298166594096247 0.14053324191783798 136.20948164955416 39025.57485564071 0.026247228650501275 0.04195909643401241 4.4809152384484325e-08 7.348633271177849 0.12349788737499712 ETPHS(ph)PGVEDAPIAK ddPTM_A549_MK2206_60min_R1 4 ETPHSPGVEDAPIAK 15 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 ET(0.003)PHS(0.997)PGVEDAPIAK;ET(0.001)PHS(0.999)PGVEDAPIAK;ET(0.011)PHS(0.989)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK 248.23 1.7843999999999996e-76 1132849000.0 14374.899999999998 16657.1 14868.5 13166.699999999999 18367.8 13894.6 14924.3 14993.3 21068.7 20847.5 22837.8 True False 16801.03168743743 17504.875241773476 16977.07687595892 16392.54209107562 15665.920951677519 15364.91734951099 17635.852126731723 17118.646190055522 16296.673089800404 16138.035270782435 17166.5439687851 0.9787078702613466 1.019708758711339 0.9889630030849134 0.9549121897152454 0.9125844421663296 0.8950501264232271 1.0273385346986552 0.9972098181895743 0.9493275477832678 0.9400864437318973 1.0 14.067311999497477 -11.04822362829891 1.3202577853119293 1.0001772019626625 0.9672476325602338 0.0 0.0425839433858381 1.0266022398548873 3.162000932050941 0.030375028764350595 0.006618342629889168 8.949038401513661e-12 11.04822362829891 -0.03292956940242864 ETPHS(ph)PGVEDAPIAK ddPTM_A549_PD325901_60min_R1 2 ETPHSPGVEDAPIAK 15 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 ET(0.001)PHS(0.999)PGVEDAPIAK;ET(0.008)PHS(0.992)PGVEDAPIAK 171.29 9.509399999999999e-28 1542240000.0 12474.599999999999 12210.1 13222.7 13751.0 14982.5 13380.0 14673.5 15438.699999999999 14602.8 15555.400000000001 15276.0 True False 13741.012208684857 13239.087978349673 14120.071936554443 14600.368039213115 13930.180886819038 13271.037716124854 15231.908072147287 15130.763017074147 13989.09509860491 14573.229389298824 13397.148842542489 1.0256669064577706 0.9882019028040582 1.0539609660613996 1.0898115868392697 1.0397869763590228 0.9905867190176189 1.136951470135089 1.1294017253153585 1.0441844950011083 1.0877858834427296 1.0 13.709638381098788 -2.0256770678900584 22.36705578951427 1.0380459855223607 0.0052116150363981095 0.0 0.052147912997339146 0.0 0.0 0.00704098495964337 0.0 0.009425902259834295 2.0256770678900584 -1.0328343704859626 ETPPNGNLS(ph)PAPR ddPTM_A549_MK2206_60min_R1 2 ETPPNGNLSPAPR 13 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 ETPPNGNLS(1)PAPR;ETPPNGNLS(1)PAPR 188.81 1.9982e-25 38088000.0 10115.9 10474.0 10065.5 9403.7 12777.2 10401.2 9222.3 9984.2 13738.2 15799.4 14302.2 True False 11823.216609990208 11007.081861928868 11492.939253789174 11707.60692214813 10897.690805854489 11501.848080242218 10897.872534615231 11399.490925330128 10626.51963539734 12230.304566840141 10750.569019360799 1.0997758898805885 1.02386039679445 1.0690540410550766 1.089022069535463 1.0136850232047008 1.0698827252332814 1.0137019273109313 1.0603616333982582 0.9884611331976887 1.1376425326710125 1.0 13.39212540212551 -8.354479497612738 0.9187681996523056 0.9938443716641702 1.0604666063032802 0.0 0.051632357977779354 0.2909437907370153 0.48380186254136803 0.005495909909553556 0.007000169862684273 4.4209998725639265e-09 8.354479497612738 0.06662223463910999 ETPPNGNLS(ph)PAPR ddPTM_A549_PD325901_60min_R1 2 ETPPNGNLSPAPR 13 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 ETPPNGNLS(1)PAPR;ETPPNGNLS(1)PAPR 155.81 2.3790000000000002e-18 36601000.0 13377.8 12979.7 12569.3 13490.400000000001 14248.2 15983.1 14527.7 15012.5 15277.8 15484.2 16837.1 True False 14735.90440778415 14073.544871261121 13422.328283341054 14323.671369078655 13247.455585621561 15852.938932779909 15080.55957336248 14713.063910421577 14635.72719598063 14506.524969449893 14766.243439170741 0.9979453791675877 0.9530890459199607 0.9089873357861178 0.9700281204278357 0.8971446014820359 1.0735932262044703 1.021286127069932 0.9963985742908658 0.9911611748967996 0.9824113376709009 1.0 13.85001522792734 -7.246897812507584 24.999923447479073 1.0027587441198034 0.9452048901253505 0.46350898782910466 0.03442883299459474 617.6079752232265 1061794.0566848451 0.004846745732941461 0.00837558631420494 5.6637253821225465e-08 7.246897812507584 -0.0575538539944529 ETPQGELRPEVVEDEVPRS(ph)PVAEEPGGGGSSSSEAK ddPTM_A549_MK2206_60min_R1 2 ETPQGELRPEVVEDEVPRSPVAEEPGGGGSSSSEAK 36 2 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 ETPQGELRPEVVEDEVPRS(1)PVAEEPGGGGSSSSEAK;ETPQGELRPEVVEDEVPRS(1)PVAEEPGGGGSSSSEAK 163.26 3.2468999999999995e-52 89168000.0 2724.4 3122.5 3613.2 2975.3 4121.3 2677.8 2886.1000000000004 3173.7 4872.9 4923.7 3988.7 True False 3184.212114815029 3281.421912724162 4125.606091281214 3704.248633566293 3515.0622294530976 2961.16301862022 3410.467011716495 3623.581694048621 3769.1959304223037 3811.4327503418394 2998.195707480278 1.0620427835550073 1.0944655495761186 1.3760296170754063 1.2354926078789537 1.1723925228374104 0.9876483417117621 1.1375064687097078 1.208587446445891 1.2571547351023273 1.2712421476798845 1.0 11.549878843063262 -10.968488444518673 1.2366674234316704 1.00003048901116 1.1790980091332433 0.0 0.1269045416313519 0.4940413961379723 1.3440898318359873 0.07442654772866793 0.017226580531708786 1.075255209842576e-11 10.968488444518673 0.17906752012208327 ETPQGELRPEVVEDEVPRS(ph)PVAEEPGGGGSSSSEAK ddPTM_A549_PD325901_60min_R1 2 ETPQGELRPEVVEDEVPRSPVAEEPGGGGSSSSEAK 36 2 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 ETPQGELRPEVVEDEVPRS(1)PVAEEPGGGGSSSSEAK;ETPQGELRPEVVEDEVPRS(1)PVAEEPGGGGSSSSEAK 165.42 1.5689999999999997e-52 94654000.0 3750.6000000000004 3119.0 3668.3 3299.3 3273.2 3648.8999999999996 3440.4 4244.0 4374.6 3741.0 4168.9 True False 4131.358150954211 3381.849076131451 3917.252897279879 3503.090267746045 3043.301723926985 3619.1845681889404 3571.3263046591155 4159.35009064641 4190.750775081287 3504.792621556947 3656.1517288344744 1.1299744806464105 0.9249750357624061 1.0714142048280473 0.958135911077951 0.8323783993770804 0.9898890518262713 0.9767992604064055 1.1376306015539315 1.1462190537746735 0.9586015246348164 1.0 11.836110227567614 -8.23454336090093 23.13231604657033 1.076120866416712 0.9779804205501107 0.14207622976395606 0.08773979597049071 345.0385815569927 296755.219375587 0.014147288606371032 0.01826037193476278 5.82715592306092e-09 8.23454336090093 -0.0981404458666012 ETPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 ETPSPR 6 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ETPS(1)PR 74.929 0.046093 16401000.0 1632.5 1605.5 1152.8 1346.6 1461.4 1010.4 961.44 1019.7 1254.0 1478.1 1859.6 True False 1798.2301982170186 1740.801119502741 1231.035940349547 1429.776423649507 1358.7563055563046 1002.1716373970521 998.0281253201557 999.3612835608249 1201.298740902468 1384.7725137458758 1630.88098897565 1.1026127659667428 1.0673992346897925 0.7548288003055059 0.8766896133528075 0.8331425252615975 0.6144970995256448 0.6119564407621265 0.6127738874364583 0.7365949747547176 0.8490947672494766 1.0 10.671435792107877 -5.7494699184532605 20.39246339612555 0.8119905957057431 1.0850086729936212 0.4652586564193574 0.12418250619214653 22.44859465529786 38236.81905209261 0.022032377112729217 0.08323029503190556 1.7804512281088173e-06 5.7494699184532605 0.2730180772878782 ETPS(ph)PRPMR ddPTM_A549_MK2206_60min_R1 1 ETPSPRPMR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ET(0.019)PS(0.981)PRPMR 40.589 0.027101999999999998 4812500.0 743.47 740.47 716.05 699.94 897.95 898.68 801.44 718.63 829.98 1164.3 1257.6 True False 868.9495599036584 778.1567601969134 817.5966571631551 871.4253314215007 765.8627445071719 993.7777211044955 947.0512739926083 820.4980032120743 641.9908552057096 901.2838213585313 945.3032120057156 0.919228400864044 0.8231821814567244 0.8649041352862891 0.9218474245660679 0.8101768139369669 1.051279323378081 1.001849207708904 0.8679733579569316 0.6791374947764675 0.9534335755045354 1.0 9.88463334693199 -4.363644052120585 17.789571899606692 0.8727502070080791 0.8988764470770011 0.0 0.104339895865631 0.0 0.0 0.017166384760705537 0.0 4.3286846480158705e-05 4.363644052120585 0.026126240068921947 ETPS(ph)PRPMR ddPTM_A549_PD325901_60min_R1 2 ETPSPRPMR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ET(0.018)PS(0.982)PRPMR;ET(0.004)PS(0.996)PRPMR 54.486000000000004 0.0054828 13276500.0 3003.6 3438.1 2735.4 2723.0 4020.2 3012.3999999999996 3083.2 3456.3 3273.8999999999996 3339.0 4020.6000000000004 True False 3308.5232608665474 3727.840753012999 2921.0406932964534 2891.193525618306 3737.8350209370874 2987.868013158037 3200.5328631917755 3387.3613850851016 3136.309368293931 3128.174970162697 3526.091688683319 0.9382975693697818 1.0572160573637879 0.8284074695707081 0.8199428094559587 1.0600504328725597 0.8473597050091852 0.9076714804279209 0.9606560702764877 0.889457690042389 0.8871507738163189 1.0 11.783854274092983 -10.947489948709446 1.1606546184854454 1.0007883950732677 0.9206693473766698 0.0 0.08371676851701308 0.8431715097049552 1.9855666291317515 0.05499140276113279 0.012316175891883637 1.1285220556855777e-11 10.947489948709446 -0.08011904769659783 ETPS(ph)QENGPTAK ddPTM_A549_MK2206_60min_R1 2 ETPSQENGPTAK 12 0 O15355 O15355 PPM1G Protein phosphatase 1G 1 ET(0.003)PS(0.997)QENGPTAK;ET(0.002)PS(0.998)QENGPTAK 152.16 1.7134e-12 22036800.0 6672.299999999999 7674.0 7354.6 6519.7 9069.2 6646.299999999999 6321.3 6673.6 9198.9 9083.599999999999 9367.4 True False 7798.421117926995 8064.573821695832 8397.592870291377 8117.026792680456 7735.132693896591 7349.607054543122 7469.798385767458 7619.603237042843 7115.36383762477 7031.608451165816 7041.216052912167 1.107538961924291 1.1453382144637383 1.1926338869857898 1.1527876337956349 1.098550681554137 1.043797974570516 1.0608676583184853 1.0821430815052837 1.0105305367929929 0.9986355195360925 1.0 12.781608895627059 -7.602486166757923 0.6060850539354822 1.0023244831419302 1.1587550195064638 0.7836710140181081 0.029035555561308983 0.24587110314058513 0.18080392112062538 0.006936358442797408 0.015736364983152326 2.4975479403261458e-08 7.602486166757923 0.15643053636453352 ETPSSSPAS(ph)PQETR ddPTM_A549_MK2206_60min_R1 1 ETPSSSPASPQETR 14 0 Q9BX66-7;Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-3;Q9BX66-5;Q9BX66-2;Q9BX66-11;Q9BX66;Q9BX66-12;S4R406 Q9BX66-7 SORBS1 Sorbin and SH3 domain-containing protein 1 1 ET(0.001)PS(0.075)S(0.075)S(0.067)PAS(0.782)PQET(0.001)R 59.306000000000004 0.0074914000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ETPSSSPAS(ph)PQETR ddPTM_A549_PD325901_60min_R1 1 ETPSSSPASPQETR 14 0 Q9BX66-7;Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-3;Q9BX66-5;Q9BX66-2;Q9BX66-11;Q9BX66;Q9BX66-12;S4R406 Q9BX66-7 SORBS1 Sorbin and SH3 domain-containing protein 1 1 ET(0.001)PS(0.017)S(0.017)S(0.017)PAS(0.948)PQET(0.001)R 51.211000000000006 0.024263999999999997 814010.0 441.95 446.98 350.37 669.24 493.45 540.01 389.23 605.59 448.89 617.79 664.12 True False 486.8164386536055 484.6485732764464 374.1482151459672 710.5774348456825 458.791774310085 535.6123375997449 404.04236064482865 593.5110323738355 430.02471435702427 578.782633967299 582.4374502035428 0.8358261277386595 0.8321040707582894 0.6423835126247714 1.2200064309006213 0.7877099491966946 0.9196049076386932 0.6937094455441165 1.0190124830853904 0.738319134881771 0.9937249635390607 1.0 9.185959312285714 -11.107289432941142 1.4528737970091028 0.999901258599226 0.8423494479783502 0.11087377776015694 0.15252994393163624 0.6818032365316304 2.576055518155447 0.10317452765621452 0.02247910026173079 7.811070669872178e-12 11.107289432941142 -0.15755181062087575 ETPVPPGLDFNLTESDT(ph)VKR ddPTM_A549_MK2206_60min_R1 2 ETPVPPGLDFNLTESDTVKR 20 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 ETPVPPGLDFNLT(0.001)ES(0.022)DT(0.978)VKR;ETPVPPGLDFNLT(0.032)ES(0.143)DT(0.826)VKR 145.61 3.5209999999999994e-21 20636000.0 3571.5 4283.8 3757.0 2875.9 5684.0 4388.3 3736.8 4437.7 6991.6 6409.3 5409.3 True False 4174.281885208438 4501.827122410814 4289.799093585609 3580.4956291040585 4847.89112954927 4852.666993282212 4415.7281900773305 5066.757564886271 5408.013763290974 4961.434678547829 4066.0215209148487 1.0266256250088002 1.1071823155028233 1.0550360030117132 0.8805894436826425 1.1922935244224928 1.193468103481747 1.0860070876072978 1.2461216790968332 1.3300504523827947 1.2202184993431895 1.0 11.989402135859233 -6.805942840757646 24.997288867079526 1.1657726646160778 1.0264649339720069 0.39792260562586323 0.09550460021185332 159.21169441817688 89427.62110402326 0.018918675078812515 0.03575306797121735 1.563353388324285e-07 6.805942840757646 -0.13930773064407087 ETPVPPGLDFNLTESDT(ph)VKR ddPTM_A549_PD325901_60min_R1 2 ETPVPPGLDFNLTESDTVKR 20 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 ETPVPPGLDFNLTES(0.002)DT(0.997)VKR;ETPVPPGLDFNLT(0.001)ES(0.062)DT(0.938)VKR 207.07 4.0688999999999995e-56 62693000.0 9094.6 9048.3 8836.7 10526.2 10535.5 10152.2 9581.7 10259.0 10802.5 10786.3 11316.2 True False 10017.87709690934 9810.831996011608 9436.411601393864 11176.379467265304 9795.522825501876 10069.523849151181 9946.336836807428 10054.37619697019 10348.508491705668 10105.251177198526 9924.379139302135 1.0094210384644555 0.9885587660752639 0.9508314292451967 1.126154020356301 0.9870161838849981 1.0146250670003376 1.002212500872557 1.0130987597151793 1.0427361093777558 1.0182250229820533 1.0 13.276761135968885 ETQPWSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 ETQPWSSPK 9 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 ETQPWS(0.127)S(0.873)PK 88.056 0.0011294 6055100.0 5339.1 4580.1 4104.9 3745.6 6100.9 5200.0 4459.7 4738.7 7848.3 6544.8 7755.0 True False 6240.209551537553 4813.207526811189 4687.036544918701 4663.272168146374 5203.465691813358 5750.260548519357 5269.969762708168 5410.4252366601095 6070.672581159758 5066.325134438988 5829.2194728883 1.0705051646383823 0.8257036039211455 0.8040590282658097 0.7999822600324542 0.8926522180224432 0.9864546317502403 0.9040609617151658 0.928156035610599 1.0414211730051437 0.8691258165870177 1.0 12.509087005484199 -8.116208411805392 0.9496339793820945 1.019286246707748 0.8735911359828925 0.01923488913642246 0.08888267442349375 0.38729224011130514 0.6926709596411503 0.015204733263675732 0.02176167166197687 7.652292960227433e-09 8.116208411805392 -0.14569511072485541 ETQS(ph)PEQVK ddPTM_A549_MK2206_60min_R1 2 ETQSPEQVK 9 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 ETQS(1)PEQVK;ETQS(1)PEQVK 175.57 9.2204e-08 1308390000.0 23999.8 24885.0 22978.1 19225.8 31453.0 25987.0 25313.0 24651.0 32532.0 30732.0 31111.0 True False 28050.379501225103 26151.540207571114 26236.74009910021 23936.12186307897 26826.305365537166 28736.92709122551 29912.044443220813 28145.35474052132 25163.55394292893 23789.619855699035 23385.28008008095 1.1994887127786757 1.1182906562597212 1.1219339691145316 1.0235550646009672 1.1471449250841859 1.2288468212832298 1.279097121812931 1.2035500384917304 1.0760424445103258 1.017290354198601 1.0 14.513313087233996 -9.076513929119969 2.2866244110412652 1.0276774685396945 1.162100748228967 0.45869609814508894 0.06526562511165576 0.20521068801194137 2.202554772939556 0.01439880206270838 0.014044403920877234 8.384671860459055e-10 9.076513929119969 0.13442327968927237 ETQS(ph)PEQVK ddPTM_A549_PD325901_60min_R1 3 ETQSPEQVK 9 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 ETQS(1)PEQVK;ETQS(1)PEQVK;ET(0.043)QS(0.957)PEQVK 244.45 8.153199999999999e-43 2105224700.0 37591.7 39428.9 39402.3 39346.3 42189.8 36296.8 37589.7 41045.1 39015.0 39751.0 42156.0 True False 41407.98171045312 42751.71177873659 42076.3770232781 41776.63158906923 39226.53399490859 36001.21089496569 39020.1966033731 40226.42328124196 37375.335228317206 37241.11507605189 36971.07924890165 1.1200100876601615 1.1563555256506792 1.1380889570468278 1.1299813918824222 1.0610059211640122 0.9737668368454574 1.0554248725247133 1.0880510955718723 1.0109343840544651 1.007303974691468 1.0 15.174109538419803 -6.879265682316822 3.0386354698546887 1.014365415074654 1.1390690940800379 0.7547480104610247 0.029980738964743035 0.09184163331599447 1.7018663577637247 0.004722675571343665 0.009546416545358658 1.3204875706608314e-07 6.879265682316822 0.12470367900538393 ETQS(ph)PEQVKSEK ddPTM_A549_MK2206_60min_R1 2 ETQSPEQVKSEK 12 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 ET(0.001)QS(0.999)PEQVKSEK;ETQS(1)PEQVKSEK 127.18 7.9659e-08 16743700.0 3285.3 3714.6 3011.8 3360.6 4212.1 2838.1000000000004 2787.5699999999997 2638.6 4798.7 6048.6 5840.7 True False 3839.7783221266372 3903.657273660586 3438.9185280971897 4183.947150863069 3592.5056697351315 3138.4258582216917 3294.0353861094686 3012.629630373598 3711.80211194925 4682.217059064858 4390.292994880552 0.8746063933783323 0.8891564363044963 0.7833004612920494 0.9529995277631584 0.8182838079199481 0.7148556740703543 0.750299670192989 0.6862024092438876 0.8454565825737647 1.0664930710831177 1.0 12.1001015087407 -10.113337540314351 0.9553113722006512 0.9849552934078668 0.8123922191812548 0.5152728757106803 0.07925250521794745 0.35448904467938996 0.6467858094898459 0.03280095736290331 0.015476453687171763 7.703045438735084e-11 10.113337540314351 -0.172563074226612 ETQS(ph)PEQVKSEK ddPTM_A549_PD325901_60min_R1 4 ETQSPEQVKSEK 12 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 ET(0.437)QS(0.563)PEQVKSEK;ETQS(1)PEQVKSEK;ET(0.007)QS(0.993)PEQVKSEK;ETQS(1)PEQVKSEK 194.77 1.8366e-24 948286000.0 40776.200000000004 38748.0 43896.700000000004 45299.1 45639.4 55089.4 50860.700000000004 53983.6 52221.5 51925.5 52411.0 True False 44915.769806148106 42013.42994611781 46875.7940343008 48097.122525279534 42433.84599138251 54640.770191232376 52796.23177054296 52906.85474868507 50026.811960158055 48646.91506833871 45964.779260702744 0.9771779725383891 0.9140352814015771 1.0198198444167645 1.04639080832919 0.9231817638176069 1.188753020683972 1.1486236335672064 1.151030323644291 1.0883727228714903 1.0583519784229454 1.0 15.48824119183379 -6.309444130186872 1.1384074775092452 1.0651870991460475 0.9479465375106052 0.32804057465563075 0.0715982348687817 0.6595437213379772 1.5023840978632432 0.012329147442028232 0.058141913728500826 4.904061070271507e-07 6.309444130186872 -0.11724056163544228 ETQSTPQS(ph)APQVR ddPTM_A549_MK2206_60min_R1 2 ETQSTPQSAPQVR 13 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ETQS(0.001)T(0.041)PQS(0.959)APQVR;ETQS(0.001)T(0.062)PQS(0.937)APQVR 169.4 1.2739000000000001e-21 34241000.0 2015.31 1910.47 2087.17 1843.1999999999998 2829.3 2522.13 2326.44 2383.06 2829.2 3074.9 3514.3999999999996 True False 2355.445058401068 2007.70476272286 2383.1620905400773 2294.784082744393 2413.1137179510465 2789.0201225456035 2749.1240340728714 2720.8660528151713 2188.3907173040243 2380.277954389203 2641.6774874943417 0.8916474738311949 0.7600113080522894 0.9021396827666995 0.868684422533736 0.9134777918101993 1.0557761633465022 1.040673604967745 1.0299766211794237 0.8284094964899502 0.9010479006833347 1.0 11.367238628766144 -6.679315927850132 2.3150247200489362 0.9458506874042997 0.8447979861493066 0.32833637947194116 0.07378687962272508 0.3883391628981453 4.2234463674200775 0.013451902705348722 0.03131855848054736 2.0925896461088848e-07 6.679315927850132 -0.1010527012549931 ETQSTPQS(ph)APQVR ddPTM_A549_PD325901_60min_R1 2 ETQSTPQSAPQVR 13 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ETQS(0.017)T(0.261)PQS(0.722)APQVR;ETQS(0.001)T(0.067)PQS(0.933)APQVR 141.54 2.6529e-12 34672000.0 1921.3200000000002 1573.2 1921.9299999999998 1744.92 1957.34 1747.19 2155.62 1673.44 2117.85 1908.8 2052.66 True False 2116.3709919989733 1705.7790851458794 2052.363727303959 1852.6997453991532 1819.8631908564234 1732.9614639189992 2237.653298700525 1640.0619264117156 2028.8441295217617 1788.2780422421542 1800.195832883823 1.1756337579165783 0.9475519573963835 1.1400780347414623 1.0291656671770102 1.010925121374764 0.9626516361516526 1.243005487417398 0.9110463964270038 1.1270130129518496 0.9933797254587702 1.0 10.813938142196221 -11.22080683836946 1.6788292848806043 0.9999416856685425 1.0668793719732543 0.05621542980579064 0.09810298178097156 0.9095387768110866 4.613758696327435 0.06601947645982532 0.013608382875973012 6.01441181653699e-12 11.22080683836946 0.06693768630471186 ETQTHENMSQLS(ph)EEEQNKDYQDCSK ddPTM_A549_MK2206_60min_R1 1 ETQTHENMSQLSEEEQNKDYQDCSK 25 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 ETQTHENMSQLS(1)EEEQNKDYQDCSK 210.8 6.6335999999999995e-81 9277400.0 1191.0 1225.1 1143.9 1253.7 2019.0 1318.5 1501.3 1342.0 2560.8 2151.0 2147.8 True False 1392.0116828456526 1287.4523571748189 1306.1222206953896 1560.8565562807325 1722.0077745531269 1458.0227948505342 1774.0667768580333 1532.2326097026332 1980.7828887572987 1665.087606065621 1614.4419837355886 0.8622246552488284 0.7974596610748673 0.809023943785957 0.9668087004706933 1.0666272259401024 0.9031125364300037 1.0988730438941483 0.9490787684778027 1.2269148775318945 1.0313703575850064 1.0 10.65681988214489 -6.700859752260016 0.6989535677883463 1.096420963031611 0.7912598547808903 0.49895561069830385 0.08765460949398923 0.5356797023948784 0.43846663238951256 0.018795075785474666 0.08886733384371595 1.9913162956275658e-07 6.700859752260016 -0.30516110825072074 ETRIS(ph)FVEEDVHPK ddPTM_A549_MK2206_60min_R1 4 ETRISFVEEDVHPK 14 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ET(0.436)RIS(0.564)FVEEDVHPK;ET(0.127)RIS(0.873)FVEEDVHPK;ET(0.112)RIS(0.888)FVEEDVHPK;ET(0.121)RIS(0.879)FVEEDVHPK 138.66 5.072799999999999e-10 32377400.0 3828.46 4210.82 3137.81 3158.7200000000003 4772.51 3430.7000000000003 3732.74 3772.5299999999993 5314.159999999999 4968.95 4887.110000000001 True False 4474.610451139607 4425.132752133596 3582.798640895356 3932.606541800328 4070.4801011057702 3793.734396885648 4410.930540630824 4307.297680388579 4110.511244969729 3846.4607439143488 3673.505709625676 1.2180763567114647 1.204607560711947 0.9753077643264197 1.0705323069175396 1.1080641825164184 1.0327285968128312 1.2007414413629127 1.172530552791079 1.1189614417092013 1.047081738252231 1.0 11.842941801626838 -10.502052202503188 0.8837633631418548 1.0019585796352095 1.1187786161562407 0.20237484532977823 0.0733736276689026 0.6348124798911418 0.9121425012845537 0.04542053988124904 0.013929746671483842 3.147369975271478e-11 10.502052202503188 0.11682003652103123 ETRIS(ph)FVEEDVHPK ddPTM_A549_PD325901_60min_R1 2 ETRISFVEEDVHPK 14 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ET(0.143)RIS(0.857)FVEEDVHPK;ET(0.116)RIS(0.884)FVEEDVHPK 110.37 4.7658e-06 64866000.0 3155.1 3153.6000000000004 3263.9 2812.4 3467.2 3411.5 3932.3 3404.7 3534.7999999999997 3707.3 4188.6 True False 3475.403429338143 3419.364939560164 3485.407881425126 2986.115560576175 3223.675833190651 3383.7178750792204 4081.945828337123 3336.79058756452 3386.2446485981213 3473.220445308225 3673.4287537230643 0.9460925098426857 0.9308374188813643 0.9488159741474836 0.8128960055505938 0.8775659062186565 0.9211333884316611 1.1112086560002075 0.9083585966333613 0.9218212399426888 0.9454982465055499 1.0 11.842911578436574 -7.538961448092821 24.973808288071044 0.9693953143971874 0.9019935730588134 0.2506063586511653 0.06113444373709865 292.2155321510031 453761.2592929794 0.009726721002601961 0.014429327185112676 2.890936496652704e-08 7.538961448092821 -0.06740174133837395 ETRS(ph)SSESLIFSGNQGR ddPTM_A549_MK2206_60min_R1 1 ETRSSSESLIFSGNQGR 17 1 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 ET(0.101)RS(0.438)S(0.438)S(0.024)ESLIFSGNQGR 96.848 5.803899999999999e-07 6532800.0 679.4 800.72 781.02 978.16 978.69 613.79 793.26 800.32 1043.4 1140.7 1406.0 True False 794.0661102647663 841.4732278483558 891.7803801097234 1217.8092439112706 834.7259974628032 678.740850399173 937.3850738762429 913.767810877207 807.0715659674182 883.0150777494433 1056.8513963740736 0.7513507698330237 0.7962077078531062 0.8438086784663498 1.1522994132282207 0.7898234324396456 0.6422292223181508 0.8869601507764433 0.8646133354341313 0.7636566207286861 0.835514889585195 1.0 10.04555681863328 -10.942160856583367 1.1733835373555621 1.0009977780516348 0.8302123939691448 0.00469249342935063 0.12851465186027858 0.6390113124410258 1.548502096042433 0.08895019406328003 0.020313862477864427 1.1424551070716816e-11 10.942160856583367 -0.17078538408249 ETRSS(ph)SESLIFSGNQGR ddPTM_A549_MK2206_60min_R1 1 ETRSSSESLIFSGNQGR 17 1 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 ET(0.031)RS(0.154)S(0.784)S(0.031)ESLIFSGNQGR 158.0 9.6772e-23 8218800.0 818.3 897.2 1011.9 1085.3 1562.2 993.5 718.99 977.01 1405.6 1302.4 1256.5 True False 956.4090344858082 942.8636477489573 1155.402635826265 1351.1985487209686 1332.4024494338269 1098.6315105680737 849.6211762426943 1115.5041594676381 1087.2338442819657 1008.1869354439156 944.4763723641706 1.0126341563122097 0.9982924669558685 1.2233261409537575 1.4306324522853964 1.4107313728755513 1.1632175697715221 0.8995684816508018 1.1810821235001978 1.1511498604887818 1.067455962842424 1.0 9.8833708954414 -7.530757939189005 24.979147044078925 1.0697068977282467 1.2226524977002604 0.21013988718754428 0.1433125959477002 249.2823442704894 790288.8464860423 0.024045531231198486 0.0357020531441169 2.946063210610225e-08 7.530757939189005 0.15294559997201373 ETS(ph)MDSR ddPTM_A549_MK2206_60min_R1 1 ETSMDSR 7 0 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 ET(0.108)S(0.887)MDS(0.005)R 45.68 0.024435 13580000.0 351.82 273.28 113.6 158.7 290.82 287.2 171.27 255.88 185.43 454.21 712.29 True False 411.19861482683274 287.1887847267443 129.71018819039796 197.58150712431373 248.04076324692454 317.5913133720694 202.38754204521112 292.1517735996348 143.43040107086293 351.6036455374546 535.4087347960805 0.7680087904868507 0.5363916687614838 0.2422638626540157 0.36902929347905766 0.46327365828537537 0.5931754428568101 0.37800567845105076 0.5456612016442088 0.2678895426042887 0.6567013623178353 1.0 9.064496865444104 -10.892120707032047 1.0809396012307153 1.0076894464623176 0.4448955060881592 0.34211128117581624 0.1734166114595429 0.2575326555790829 0.52220311520237 0.11192047168349241 0.025335217018744003 1.2819742235111066e-11 10.892120707032047 -0.5627939403741584 ETS(ph)PADAR ddPTM_A549_MK2206_60min_R1 1 ETSPADAR 8 0 M0QZR4;M0QYC1;Q92888-2;Q92888;Q92888-3;Q92888-4;M0R2C7 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 ET(0.434)S(0.566)PADAR 51.193000000000005 0.029722000000000002 28367000.0 880.31 735.77 633.36 491.98 565.2 493.03 351.23 305.58 730.63 1061.0 921.84 True False 1028.884806486866 773.2175502722366 723.1799717629442 612.5151220858212 482.0598287159125 545.2021073531731 415.04394460524026 348.8969007995013 565.1434715763604 821.3193631034978 692.9216865102964 1.4848500581191977 1.1158801424823743 1.0436676840135213 0.8839600982480141 0.6956916461132429 0.7868163429823203 0.5989766992219444 0.5035156318409106 0.8155950125079001 1.1852989725864116 1.0 9.436548499038242 -5.32266115218509 1.1187198968609455 0.8339922359988631 1.737526706755471 0.56491277982303 0.17857918818230592 0.8779830824298157 0.9404223801825428 0.026512291705835116 0.9052790487421405 4.757062395286828e-06 5.32266115218509 0.9035344707566079 ETS(ph)PLLR ddPTM_A549_MK2206_60min_R1 1 ETSPLLR 7 0 Q9H4B6;G3V453 Q9H4B6 SAV1 Protein salvador homolog 1 1 ET(0.122)S(0.878)PLLR 75.738 0.015326 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ETS(ph)PQVKGEEMPAGK ddPTM_A549_PD325901_60min_R1 1 ETSPQVKGEEMPAGK 15 1 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 ET(0.088)S(0.912)PQVKGEEMPAGK 69.07 0.00054167 21437000.0 4410.3 4951.8 4884.5 4949.9 5891.5 4981.9 4857.2 5544.0 5063.6 5528.4 6115.4 True False 4858.030409308741 5369.10556434361 5215.991542884598 5255.644080961459 5477.7013645716215 4941.3290581436795 5042.043403961825 5433.420570816138 4850.794501143329 5179.335880517351 5363.244568714607 0.9058006486683583 1.0010928078244263 0.9725440404696478 0.9799374266128354 1.021340961500185 0.921332039744731 0.9401106623728398 1.0130846171943917 0.9044514824924168 0.9657094346824961 1.0 12.388890327698546 -7.278068075243689 24.716350307136278 0.9553521676023531 0.9775401140846868 0.05100073459261634 0.03938711598080707 1848.3756645473902 2747360.215297643 0.006738428980590796 0.010788681047991331 5.27147225124239e-08 7.278068075243689 0.022187946482333687 ETS(ph)SLESFVR ddPTM_A549_MK2206_60min_R1 1 ETSSLESFVR 10 0 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 ET(0.052)S(0.473)S(0.473)LES(0.001)FVR 49.5 0.029044 1812700.0 497.05 507.36 318.57 420.98 575.76 369.74 407.9 308.31 701.5 653.93 788.26 True False 580.939888294233 533.1824568902264 363.7480163011892 524.1201188985102 491.06646670465983 408.86564138645156 482.0101500568784 352.0138866597758 542.6113700653093 506.2067588258909 592.5132871307452 0.9804672754385703 0.8998658232158315 0.6139069354252705 0.8845710809905547 0.8287855772528863 0.6900531182454823 0.8135009974055097 0.5941029413271194 0.9157792438595146 0.8543382398683497 1.0 9.210703696634054 -8.973784390774528 16.73743156427521 0.9628507513697949 0.786133575454109 0.19758020114835273 0.11750551246191707 3.809325177499981 2432.2694993304767 0.019527553247094206 0.020326888116971347 1.0622227759367586e-09 8.973784390774528 -0.17671717591568592 ETSAATLS(ph)PGASSR ddPTM_A549_MK2206_60min_R1 1 ETSAATLSPGASSR 14 0 A0A087WTU3;Q9Y6I9 A0A087WTU3 TEX264 Testis-expressed sequence 264 protein 1 ETSAAT(0.006)LS(0.983)PGAS(0.011)SR 113.53 4.862200000000001e-06 3752100.0 1265.8 1643.2 1087.9 1221.4 1552.5 1120.4 980.29 900.9 1596.4 1580.0 2061.7 True False 1479.4360941612329 1726.8318613253311 1242.1805786297011 1520.6430548307292 1324.1293065843142 1238.9599843386711 1158.3960039207104 1028.6053338905383 1234.8179489269567 1223.0769026423434 1549.7229899746997 0.954645510024592 1.1142842124020649 0.8015500748620762 0.9812353979826773 0.8544296723674026 0.7994719006903924 0.7474858483835373 0.6637349645999192 0.7967991421144988 0.7892229195504875 1.0 10.597794644222773 -5.76470444196294 24.999951743909605 0.8655410972147514 1.0344648685246391 0.3258657069205436 0.10357378092313153 86.49567521996859 662307.0986251093 0.016843426816448525 0.05572148219530043 1.7190779033782116e-06 5.76470444196294 0.16892377130988778 ETSFGS(ph)SENITMTSLSK ddPTM_A549_MK2206_60min_R1 2 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 ETSFGS(0.973)S(0.026)ENITMTSLSK;ET(0.001)S(0.001)FGS(0.98)S(0.018)ENITMTSLSK 134.85 2.6380000000000003e-12 7892200.0 2552.6 2752.9 2268.3 2332.76 3655.7 3140.3 2472.1 2670.5 4335.299999999999 4384.6 4472.5 True False 2983.416474921759 2893.0108514134017 2589.9790481714776 2904.286304721576 3117.9513726765063 3472.6044616375652 2921.248570619294 3049.051553063251 3353.361472051513 3394.115814763051 3361.8548152795483 0.8874316824635625 0.8605400918162015 0.7704018140224514 0.863894030022256 0.9274497395025785 1.0329430187926802 0.8689395381806169 0.9069551544002988 0.9974736139141306 1.0095961905722035 1.0 11.715041706500015 -7.332731355854147 0.46516655982110466 1.0025905087477816 0.824801455332211 0.5003295545213167 0.05481199467488972 0.6976880126516704 0.2798029296190674 0.01590901612278686 0.05050385580371953 4.648027021147433e-08 7.332731355854147 -0.1777890534155705 ETSFGS(ph)SENITMTSLSK ddPTM_A549_PD325901_60min_R1 3 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 ETSFGS(0.857)S(0.143)ENITMTSLSK;ETSFGS(0.394)S(0.394)ENIT(0.195)MT(0.016)S(0.001)LSK;ET(0.059)S(0.053)FGS(0.273)S(0.273)ENIT(0.253)MT(0.066)S(0.018)LS(0.005)K 237.86 6.660399999999999e-74 30129200.0 11370.1 12166.0 11942.4 12040.6 12830.800000000001 14467.699999999999 13603.7 14130.2 14557.699999999999 13941.8 14271.800000000001 True False 12524.384181774773 13191.271516580711 12752.883079485104 12784.32051581335 11929.608871857008 14349.879847950655 14121.396247730265 13848.362076072548 13945.890494765432 13061.512368677522 12516.45907639421 1.0006331747127675 1.0539140052364477 1.0188890485438318 1.0214007362453108 0.9531137200261383 1.1464807866478979 1.1282261350067395 1.1064121243515492 1.1142041378992802 1.043546924010743 1.0 13.611538859115896 -7.25239913461983 24.99168362841716 1.0715347897034937 1.0132253297665983 0.3992427765201395 0.046018687764568064 893.1475656262553 2469099.975151899 0.008712950646618001 0.014967032927801108 5.592433973946026e-08 7.25239913461983 -0.0583094599368954 ETSFGSS(ph)ENITMTSLSK ddPTM_A549_MK2206_60min_R1 1 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 ETS(0.001)FGS(0.464)S(0.526)ENIT(0.006)MT(0.002)SLSK 84.508 3.6386999999999996e-05 2257200.0 820.27 898.72 590.7 748.51 1214.8 1139.8 743.79 726.93 1605.3 1021.8 1244.0 True False 958.7115223239325 944.4610092565125 674.4701422893315 931.8949836018905 1036.1045292358292 1260.4128794619935 878.9270152262953 829.9745536297585 1241.7021131373356 790.9746703290792 935.0804673466209 1.0252716806761741 1.0100318017940315 0.7212963652242723 0.9965933586937502 1.1080378271357476 1.3479191614797965 0.9399480001120478 0.887596931614762 1.327909368763506 0.8458894158847575 1.0 9.868946709691349 -6.671758256952019 3.9098243908264396 1.1334757266295812 0.9193876040389963 0.03442237568446671 0.17643606562029865 0.25873434529411354 7.523909350390786 0.02529177599709443 0.05420433012500791 2.1293239701557082e-07 6.671758256952019 -0.21408812259058485 ETSFGSS(ph)ENITMTSLSK ddPTM_A549_PD325901_60min_R1 3 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 ETSFGS(0.311)S(0.689)ENITMTSLSK;ETSFGS(0.422)S(0.576)ENIT(0.001)MTSLSK;ET(0.002)S(0.002)FGS(0.198)S(0.5)ENIT(0.229)MT(0.055)S(0.013)LS(0.001)K 241.32 4.4094999999999994e-74 29551600.0 8862.4 9236.199999999999 8930.5 9018.8 10901.699999999999 9198.699999999999 8950.1 10508.500000000002 9483.8 9355.7 10745.7 True False 9762.104323845948 10014.566988446715 9536.577433459082 9575.870792819083 10136.002200823297 9123.788837019269 9290.700953182648 10298.899723741235 9085.228866802889 8764.979505346244 9424.047022604664 1.0358717757276057 1.0626609740407302 1.011940773489829 1.0161102517687202 1.0755466495987263 0.9681391460733174 0.9858504452384236 1.0928319541528322 0.9640474888347776 0.9300653407524846 1.0 13.202131022377714 -7.657220316190674 0.5489082156649961 0.9857094801743744 1.0423022374716349 0.22866334535576227 0.04226804382543213 1.0029967715792523 0.6107526927745032 0.009997699238354923 0.022518376478624143 2.2018092089737783e-08 7.657220316190674 0.05659275729726043 ETSHGS(ph)PTVTK ddPTM_A549_MK2206_60min_R1 3 ETSHGSPTVTK 11 0 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 ETSHGS(0.979)PT(0.021)VTK;ETSHGS(0.999)PTVTK;ETS(0.001)HGS(0.984)PT(0.013)VT(0.002)K 133.15 2.1076999999999997e-08 61320500.0 6045.1 6897.699999999999 6206.579999999999 6302.28 8273.8 6330.4 6340.549999999999 7111.9 11293.1 11650.5 13196.900000000001 True False 7065.365091494761 7248.763467541221 7086.766371644019 7846.3388829201 7056.7349802365825 7000.278726220568 7492.545861591424 8120.033604280301 8735.23088137498 9018.64395837634 9919.745514088927 0.7122526562258966 0.7307408700400495 0.7144100986843611 0.7909818726474398 0.7113826630142844 0.7056913623719615 0.7553163386046373 0.818572774145011 0.8805902196753344 0.9091608192536028 1.0 13.276087394158179 -8.994804882125095 0.6352477180315662 0.9827299031195251 0.7210499247253411 0.8650593203345319 0.034485778202844805 0.11567018031469822 0.10316275151739543 0.01015838696671443 0.008638648909440555 1.0120340342434318e-09 8.994804882125095 -0.261679978394184 ETSHGS(ph)PTVTK ddPTM_A549_PD325901_60min_R1 1 ETSHGSPTVTK 11 0 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 ETSHGS(0.903)PT(0.095)VT(0.002)K 113.65 4.1817e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ETSQVILRPS(ph)SSPNPTTIQNENLK ddPTM_A549_MK2206_60min_R1 2 ETSQVILRPSSSPNPTTIQNENLK 24 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 ETSQVILRPS(0.333)S(0.333)S(0.333)PNPTTIQNENLK;ETSQVILRPS(0.359)S(0.359)S(0.281)PNPT(0.001)TIQNENLK 146.57 2.2362e-28 25633000.0 3022.0 3635.0 3693.9 2912.1000000000004 4813.1 3784.6 3459.6 3256.7 5824.700000000001 5538.8 5458.7 True False 3532.0397191935863 3820.0059736596727 4217.75056475802 3625.564630729139 4105.099365875016 4185.0838599858425 4088.1645382122506 3718.3471982254596 4505.414750134582 4287.581233136336 4103.1541375442075 0.8608108788493037 0.9309925597740272 1.0279288623757137 0.883604297863177 1.0004740812227864 1.0199674980990774 0.9963468105682892 0.9062167965376363 1.0980369245477903 1.0449476401348428 1.0 12.002517635649491 -2.2929088313497754 0.27540820562214574 1.0405627738642167 5.195505712385129e-10 0.35236696683225244 0.056627648185769805 30.459346106857858 0.43798827181450833 0.02450604947063893 14.964469300196944 0.005094378028378411 2.2929088313497754 -1.040562773344666 ETSQVILRPSS(ph)SPNPTTIQNENLK ddPTM_A549_PD325901_60min_R1 2 ETSQVILRPSSSPNPTTIQNENLK 24 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 ETSQVILRPS(0.073)S(0.463)S(0.463)PNPTTIQNENLK;ETSQVILRPS(0.073)S(0.542)S(0.385)PNPTTIQNENLK 169.7 1.7594e-41 42783000.0 7732.5 7909.9 7215.7 7309.7 8033.700000000001 6334.299999999999 7794.4 8258.8 7849.4 7674.1 8751.3 True False 8517.497707634362 8576.495032796467 7705.400793529 7761.203567466809 7469.44062676043 6282.715560930473 8091.020157259335 8094.071755096734 7519.517015023783 7189.556016329899 7674.945579061412 1.1097795573784366 1.1174665597883378 1.00396813425631 1.0112389055423043 0.9732239205888787 0.8186006657911444 1.0542120558265646 1.054609660969945 0.9797485777017539 0.9367566117920444 1.0 12.90594080542548 -5.801310027274352 4.270898303837065 0.9876343664690875 1.1156801562987055 0.40852427246667034 0.06118537070198777 0.14325081484178462 5.585467195181459 0.008065130048551923 0.029165374089303805 1.5801196457426892e-06 5.801310027274352 0.128045789829618 ETSS(ph)ATPGRDSK ddPTM_A549_PD325901_60min_R1 1 ETSSATPGRDSK 12 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ET(0.001)S(0.064)S(0.467)AT(0.467)PGRDSK 138.02 1.5112e-08 8992200.0 2282.7 2622.3 1629.7 2499.5 2811.7 1966.7 1990.5 2329.6 2172.1 2474.7 2614.8 True False 2514.438023565076 2843.2904239626505 1740.301242182214 2653.888438223633 2614.2158918384175 1950.6838472573074 2066.249566743393 2283.1343004641553 2080.81419068122 2318.4470196650545 2293.1961765828814 1.0964775056061142 1.23988102413439 0.7588976730178651 1.1572880093399698 1.1399878992184138 0.8506397608616478 0.9010348036696695 0.9956122916035385 0.9073860369773797 1.011011200585464 1.0 11.163144063425975 -7.252803530139874 24.922330673110913 0.9473220064131556 1.0740923886984621 0.23344233510040902 0.12092315212408883 745.5059471978914 2151466.0083455634 0.017049489479251168 0.02923728951072941 5.58722897425851e-08 7.252803530139874 0.12677038228530657 ETSS(ph)LESFVR ddPTM_A549_MK2206_60min_R1 1 ETSSLESFVR 10 0 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 ET(0.011)S(0.113)S(0.876)LESFVR 107.83 0.00025592 1210800.0 587.87 575.76 509.62 545.52 805.5 491.81 681.18 529.62 812.39 939.36 917.4 True False 687.0880839584167 605.0637247302045 581.8917790985087 679.1724244893234 687.0120170393976 543.8530077629434 804.9415886632623 604.6952568932259 628.3849621202518 727.157923586146 689.5842610480628 0.9963801710238395 0.8774326197796336 0.8438298435264778 0.9849012845175512 0.9962698626491914 0.7886679532626947 1.167285325566848 0.8768982864750733 0.9112518913427673 1.0544874131566997 1.0 9.429583036755345 -6.28543658150511 24.588943020371616 0.9584593493520107 0.9030360235792947 0.07004702624067316 0.09875038500638757 1325.6401284050633 1358327.0203562304 0.012442320690269307 0.02892963449653549 5.182787689064539e-07 6.28543658150511 -0.055423325772716026 ETSSAT(ph)PGR ddPTM_A549_MK2206_60min_R1 2 ETSSATPGR 9 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ETSS(0.001)AT(0.999)PGR;ETSSAT(1)PGR 121.5 0.00013312 31212000.0 4722.6 4417.2 3983.8 2908.6 5905.2 5200.9 4531.9 5304.4 5510.0 6193.5 6052.2 True False 5519.659423515432 4642.016612613349 4548.762743951648 3621.2071305720156 5036.552902571136 5751.255785921991 5355.287568136232 6056.314944043705 4261.993797661945 4794.384048427436 4549.271707777502 1.2133061681233372 1.0203867587590534 0.999888121910814 0.7959971096870618 1.1071119128718054 1.2642146161746197 1.1771747022673438 1.3312713183716283 0.9368518900235343 1.0538794682742043 1.0 12.15141988762689 ETSSAT(ph)PGR ddPTM_A549_PD325901_60min_R1 2 ETSSATPGR 9 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ETS(0.001)S(0.001)AT(0.999)PGR;ETSSAT(1)PGR 123.75 0.00010201 47611000.0 6737.8 6822.2 5672.0 5383.8 6458.9 5088.200000000001 4874.799999999999 4706.2 5279.7 6066.200000000001 8298.5 True False 7421.816495893803 7397.130736512986 6056.936028506794 5716.34509850306 6005.249145995358 5046.763386187336 5060.313181592915 4612.331149057519 5057.812569651318 5683.179096735835 7277.837108525722 1.0197832659925041 1.0163913572409466 0.8322439672923311 0.7854455950665026 0.8251420107988439 0.6934427510441579 0.6953045398151246 0.6337502585286418 0.6949609470822415 0.7808884716694465 1.0 12.829294046015887 -5.783005115228138 4.634835255959673 0.808241249596433 1.0219954699635727 0.44954854681676126 0.09891095839316535 0.19142045198800778 9.886878892698904 0.0193815292085586 0.07009684449816676 1.648142979174342e-06 5.783005115228138 0.21375422036713976 ETSSAT(ph)PGRDSK ddPTM_A549_MK2206_60min_R1 3 ETSSATPGRDSK 12 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ETSSAT(1)PGRDSK;ETS(0.001)S(0.001)AT(0.999)PGRDSK;ETS(0.001)S(0.001)AT(0.989)PGRDS(0.01)K 108.59 5.8132e-05 291355400.0 9951.900000000001 9473.35 8456.25 7532.67 11867.84 9601.15 10890.119999999999 9828.26 12728.7 14386.400000000001 14751.7 True False 11631.537419405247 9955.503051050584 9655.47340567828 9378.174488154402 10122.096457232583 10617.137320272428 12868.713840003466 11221.445952783914 9845.6697735571 11136.50224821127 11088.44576379191 1.048978158633083 0.8978267345238929 0.8707688716129323 0.8457609558571131 0.9128507883661358 0.9574955360237692 1.160551633126513 1.0119944843330795 0.887921534116805 1.0043339242886757 1.0 13.436769540719938 -7.282663524029955 5.594530211653439 0.9698322831583214 0.9077627142329896 0.16462634932679043 0.0810850789989446 0.3497276466032811 37.096953905951075 0.013500923035116739 0.022233382093962403 5.2159867075894284e-08 7.282663524029955 -0.062069568925331775 ETSSAT(ph)PGRDSK ddPTM_A549_PD325901_60min_R1 2 ETSSATPGRDSK 12 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ETSSAT(1)PGRDSK;ET(0.002)S(0.002)S(0.002)AT(0.994)PGRDS(0.001)K 128.54 3.3088999999999997e-07 167159000.0 5514.1 5141.2 5405.8 5222.0 5906.6 5349.9 5753.6 5970.7 5546.0 6182.0 7097.6 True False 6073.887372734129 5574.4669670429685 5772.670095716155 5544.551079977524 5491.740792663795 5306.332188153694 5972.556396490731 5851.609704576462 5312.9209067345155 5791.667464973279 6224.640195393403 0.9757812792503509 0.8955484641776402 0.9273901646537366 0.8907424213982384 0.8822583507281279 0.8524721143048059 0.9595022698518014 0.9400719593249734 0.8535306041731355 0.9304421272830277 1.0 12.603774731750622 -11.014542065561386 1.2866612024888038 1.0002319772024886 0.9022907435920571 0.130866054634868 0.0430733516301168 0.3351264454728661 0.9841221890356799 0.028689808249119073 0.006431428874354452 9.670700521583033e-12 11.014542065561386 -0.0979412336104315 ETSTNGPVSQEAFSVTGPAAPGALPPPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ETSTNGPVSQEAFSVTGPAAPGALPPPSPK 30 0 Q86UK7-2;Q86UK7-3 Q86UK7-2 ZNF598 Zinc finger protein 598 1 ETSTNGPVSQEAFSVT(0.005)GPAAPGALPPPS(0.995)PK;ETSTNGPVSQEAFSVTGPAAPGALPPPS(1)PK 120.45 2.8292e-21 10648000.0 2194.79 2098.74 1994.33 1782.87 3458.0 1986.95 2134.6000000000004 1898.04 3211.0 3324.5 3346.4 True False 2565.216894536365 2205.556901556673 2277.15598251546 2219.6732300360763 2949.3327807849005 2197.2077301693353 2522.4291892900537 2167.092982503717 2483.713626913342 2573.4931410344725 2515.396524058465 1.0198061697236973 0.8768227515867434 0.9052870832632718 0.882434721049366 1.1725120682071635 0.8735035248535098 1.0027958475589536 0.8615313576911613 0.9874044124486568 1.0230964050480087 1.0 11.296570127317418 -9.560953820522146 0.22625709685303905 1.0230199280507013 0.934254598307473 0.04861969594632365 0.08813988542637735 7.872734169200067 1.0789467009189382 0.23777770913667776 0.11389607385118714 2.748186358205839e-10 9.560953820522146 -0.08876532974322826 ETSTNGPVSQEAFSVTGPAAPGALPPPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 ETSTNGPVSQEAFSVTGPAAPGALPPPSPK 30 0 Q86UK7-2;Q86UK7-3 Q86UK7-2 ZNF598 Zinc finger protein 598 1 ETSTNGPVSQEAFS(0.013)VT(0.011)GPAAPGALPPPS(0.976)PK 49.193000000000005 0.0036924999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ETSVSKEDT(ph)DHEEK ddPTM_A549_MK2206_60min_R1 4 ETSVSKEDTDHEEK 14 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 ET(0.001)S(0.001)VSKEDT(0.998)DHEEK;ETSVS(0.005)KEDT(0.995)DHEEK;ETSVSKEDT(1)DHEEK;ETSVS(0.002)KEDT(0.998)DHEEK 123.41 7.133400000000001e-07 132765800.0 14077.099999999999 13826.199999999999 12030.199999999999 12873.9 21641.8 20587.1 19243.2 23637.3 22849.0 19601.600000000002 18844.0 True False 16452.97032794839 14529.894523525014 13736.263256761667 16028.006077931323 18458.319888719096 22765.61325738903 22739.44035198463 26987.95966119527 17673.73798235532 15173.584946097562 14164.514732057642 1.1615625836239512 1.0257954330507653 0.9697658914973811 1.1315605498052228 1.3031381757783456 1.6072286052881906 1.6053808254030693 1.9053218674774042 1.247747509652094 1.0712393070379007 1.0 13.789993556228666 -6.585617212799898 4.5470728043248 1.265727128907125 1.0492863873313731 0.1656998821031671 0.2647605444557623 0.4320898932824297 17.927719507561164 0.04653927284822243 0.10048740888431588 2.5964668800311023e-07 6.585617212799898 -0.21644074157575188 ETSVSKEDT(ph)DHEEK ddPTM_A549_PD325901_60min_R1 3 ETSVSKEDTDHEEK 14 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 ETSVSKEDT(1)DHEEK;ETSVSKEDT(1)DHEEK;ETSVS(0.001)KEDT(0.998)DHEEK 134.21 2.3762e-10 117668000.0 13302.900000000001 12809.0 13641.4 12471.1 16118.8 11376.0 12905.3 12519.900000000001 14078.1 15346.3 14699.2 True False 14653.400614922615 13888.459383189405 14567.187436402073 13241.411523076924 14986.671094841218 11283.357627700785 13396.418253551128 12270.18077282845 13486.44641491151 14377.331998984055 12891.291585906034 1.1366898744997036 1.0773520473599068 1.1300021676903411 1.0271594149304384 1.162542247607373 0.8752697549744982 1.0391835576969919 0.9518193496021267 1.0461671993872326 1.1152747498708895 1.0 13.65410919493502 -7.224901621746219 24.999998910014796 1.0087672543294814 1.1019861511261733 0.37689722762891775 0.06513723881922906 445.68178236986546 304946.271929357 0.007849758283018786 0.013595899491496893 5.957970907633226e-08 7.224901621746219 0.09321889679669182 ETSVSKEDT(ph)DHEEKAS(ph)NEDVTK ddPTM_A549_PD325901_60min_R1 1 ETSVSKEDTDHEEKASNEDVTK 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 ET(0.005)S(0.005)VS(0.005)KEDT(0.985)DHEEKAS(0.997)NEDVT(0.003)K 114.31 2.7063000000000002e-15 37024000.0 2098.6 2758.7 2280.8 2701.9 2746.4 2379.7 2151.8 2427.1 2580.1 2771.1 2225.5 True False 2311.648327092334 2991.1853306584917 2435.5888035645794 2868.7902265398825 2553.502338565646 2360.3205121870196 2233.6879265101416 2378.689586476883 2471.667369539439 2596.1322730811166 1951.7776086068552 1.1843810057552346 1.5325441369283601 1.2478823370163878 1.4698345825309345 1.308295743995286 1.209318367921935 1.144437725210153 1.2187298265885682 1.2663673149235848 1.3301373382053454 1.0 10.930572961928544 -14.94548297232642 0.12829976547009717 9.308962400676828e-19 1.4299360633715135 0.0 0.14219594798532184 38.935775392071946 0.34745108404061154 10.021436917288442 0.3111915005482004 1.1337492888989796e-15 14.94548297232642 1.4299360633715135 ETSVSKEDT(ph)DHEEKASNEDVTK ddPTM_A549_PD325901_60min_R1 3 ETSVSKEDTDHEEKASNEDVTK 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 ETSVSKEDT(1)DHEEKASNEDVTK;ETSVS(0.001)KEDT(0.996)DHEEKAS(0.002)NEDVTK;ETSVSKEDT(0.942)DHEEKAS(0.057)NEDVTK 212.77 1.2836999999999999e-73 258589000.0 28181.5 28903.0 30395.1 29679.100000000002 38401.0 28191.199999999997 29590.600000000002 31412.7 31620.199999999997 34468.0 35428.0 True False 31042.465133876223 31338.757245087305 32457.894266584408 31512.31060087341 35703.84623625816 27961.620213962564 30716.686475597642 30786.149055713588 30291.31295620751 32291.684597654315 31070.580596595693 0.9990951098376787 1.0086312081506772 1.044650394146182 1.0142169858366314 1.14912066497303 0.8999387741414214 0.9886099933054735 0.9908456316096884 0.9749194374412956 1.0393009714531185 1.0 14.923261580005123 -7.279091804028705 24.990902648370962 0.9826289357320569 1.0397023305622592 0.2804581050509726 0.04840603629239201 795.7490419408681 1126556.28552425 0.006452067360038953 0.010329957366873749 5.259060851470747e-08 7.279091804028705 0.05707339483020235 ETTDTDT(ph)ADQVIASFK ddPTM_A549_PD325901_60min_R1 1 ETTDTDTADQVIASFK 16 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 1 ET(0.024)T(0.02)DT(0.125)DT(0.831)ADQVIASFK 71.344 0.0012212999999999998 1380900.0 892.82 860.31 1065.1 911.76 1084.0 1163.5 973.72 899.82 899.16 736.45 621.34 True False 983.4584291406542 932.8113429582079 1137.3840909666053 968.0773444428005 1007.8635795969848 1154.0248417571959 1010.7754474400288 881.8723842048662 861.3714321131282 689.950421316657 544.9191189987796 1.804778718257556 1.711834491460185 2.0872530460234278 1.7765523555523635 1.8495654574367062 2.1177910657228756 1.8549091272429596 1.6183546391713983 1.5807326300016595 1.2661519797366518 1.0 9.08989829988688 -9.758363204460684 0.5053671460850827 0.9827847721344982 1.90250282949266 0.7804581894950557 0.14728322861008128 0.24282103753082626 0.13035803830352904 0.09563087593177082 0.03936056040628589 1.7443627161880445e-10 9.758363204460684 0.9197180573581618 ETTDTDTADQVIASFK ddPTM_A549_MK2206_60min_R1 2 ETTDTDTADQVIASFK 16 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 233.24 3.1199e-55 5774300.0 3796.2 3857.5 3476.1 3457.4 5270.6 4042.7 3895.5 4648.4 6013.200000000001 6209.200000000001 6244.9 False True 4436.905751820878 4053.830273285337 3969.063249723967 4304.463155208586 4495.301721921603 4470.495830672926 4603.261925831261 5307.324935127958 4651.219801107224 4806.537407523314 4694.118979528063 0.9452052176715289 0.8635976827525792 0.8455395500271295 0.9169906374297626 0.9576454583972966 0.9523609968493768 0.9806444928019405 1.1306328106028418 0.9908610798729366 1.023948781120702 1.0 12.196638694269167 -7.055698257682844 1.3031340376107974 1.0055203390210588 0.8837265062126136 0.5979468340926617 0.04702683447382824 0.2455755188969139 0.8222268658341623 0.0075193578326444 0.017192558560750738 8.796334627801566e-08 7.055698257682844 -0.12179383280844513 ETTDTDTADQVIASFK ddPTM_A549_PD325901_60min_R1 2 ETTDTDTADQVIASFK 16 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 247.58 4.468699999999999e-66 10251900.0 4979.0 5438.1 4995.7 4954.7 5707.8 5415.0 4996.3 5753.9 5657.2 5542.0 5176.700000000001 False True 5484.4644146539285 5896.3877720136115 5334.738243584518 5260.740566059867 5306.903818841025 5370.90203533753 5186.436930580267 5639.133950652775 5419.447557442935 5192.077174196361 4539.998717805038 1.2080321505697502 1.2987641932340346 1.1750528084209932 1.1587537559048668 1.1689218761292435 1.1830184035677902 1.1423873117496746 1.2421003399267783 1.1937112528664076 1.143629656509371 1.0 12.148476174729693 -10.681657732771674 0.6009758670015101 0.9724993748202377 1.1999611426464771 0.2926644238126114 0.05908425766694816 0.4398805714037873 0.23165518666812254 0.05422824769572446 0.009342803588453557 2.0813363408721518e-11 10.681657732771674 0.2274617678262394 ETTGSES(ph)DGGDSSSTK ddPTM_A549_MK2206_60min_R1 2 ETTGSESDGGDSSSTK 16 0 Q5JPT2;Q96B97-2;Q96B97;Q5VSN0;Q5JPT1;Q5JPT3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 ETTGS(0.001)ES(0.999)DGGDSSSTK;ETTGS(0.001)ES(0.998)DGGDSSSTK 163.23 1.2136e-20 42469000.0 2297.52 2755.5 2393.3999999999996 1874.4099999999999 1671.17 1375.31 1068.97 1386.9 1752.24 3489.3 3112.1 True False 2685.2852070290064 2895.7431803079057 2732.820109286079 2333.6405341454633 1425.3431067855124 1520.844391343108 1263.1880120281971 1583.497322203116 1355.3604377522997 2701.064706575902 2339.2796804095005 1.1479111409880396 1.237878140249136 1.168231456961866 0.9975893663715105 0.6093085485767996 0.6501336304844396 0.5399901613333686 0.6769166318436615 0.5793922159470211 1.1546565933078468 1.0 11.191848642897254 -6.526108853952452 3.6291624847535684 0.7449843807596116 1.1835129969311553 0.5497023224249666 0.1763043235931937 0.13757155120493783 3.9082024296282794 0.026383951866932043 0.06089965806804682 2.9777699712766303e-07 6.526108853952452 0.4385286161715437 ETTGSES(ph)DGGDSSSTK ddPTM_A549_PD325901_60min_R1 2 ETTGSESDGGDSSSTK 16 0 Q5JPT2;Q96B97-2;Q96B97;Q5VSN0;Q5JPT1;Q5JPT3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 ETTGS(0.001)ES(0.981)DGGDS(0.016)S(0.002)STK;ETTGSES(1)DGGDSSSTK 276.64 8.429299999999997e-107 87490000.0 3651.3 3510.3 4310.3 4478.8 4531.6 3725.3999999999996 3866.5 4261.6 4400.2 4190.3 3926.5 True False 4021.9772880550054 3806.1253003989223 4602.822877939498 4755.445303907182 4213.316049171308 3695.061577552433 4013.6417733299845 4176.599044839476 4215.274896107682 3925.723742878931 3443.565392134271 1.167968901430457 1.105286198163335 1.3366445395383464 1.380965587228134 1.22353304478994 1.0730336604011137 1.1655482955247116 1.2128705481764879 1.2241018874612157 1.140017190277843 1.0 11.749687358239528 -11.075760612646318 0.4911978379998149 0.9226158701384891 1.2189639531211336 0.18329617535840148 0.09478042259890977 1.6166886141405816 0.41909178052662693 0.24210593817822434 0.02199979511179813 8.399228326013312e-12 11.075760612646318 0.2963480829826445 ETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_A549_MK2206_60min_R1 2 ETTSGTSTEPVKNSSPAPPQPAPGK 25 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ETTSGTSTEPVKNS(0.028)S(0.972)PAPPQPAPGK;ETTSGTSTEPVKNS(0.032)S(0.968)PAPPQPAPGK 197.73 2.0282999999999997e-68 115145000.0 5199.4 5910.0 6406.6 5173.0 8308.5 5922.9 6217.200000000001 5562.2 8500.900000000001 8558.2 8682.8 True False 6076.931606874631 6210.793756349019 7315.152215322214 6440.385232224792 7086.330656203395 6549.6573466971795 7346.784763259689 6350.6588835230905 6575.459723147811 6624.896676071962 6526.621126910959 0.9310991842038845 0.9516093604300544 1.120817659410309 0.9867870536669282 1.0857579317703319 1.0035295782209934 1.1256643553226924 0.9730393047234915 1.0074829831986842 1.0150576457940523 1.0 12.672120577343609 -5.54891374406067 24.999869125342336 1.0204626946591038 0.9362265529951883 0.2985480815402891 0.0519741480617116 172.51107789767838 165651.90724822518 0.00668947555028545 0.02590967838164537 2.8254410846801866e-06 5.54891374406067 -0.08423614166391546 ETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_A549_PD325901_60min_R1 2 ETTSGTSTEPVKNSSPAPPQPAPGK 25 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ETTSGTSTEPVKNS(0.014)S(0.986)PAPPQPAPGK;ETTSGTSTEPVKNS(0.012)S(0.988)PAPPQPAPGK 247.5 9.249599999999998e-113 180961000.0 8432.8 8645.7 8801.7 8687.9 10255.5 10223.3 10582.6 10227.8 10009.5 11243.9 10592.5 True False 9288.891648100744 9374.303481086785 9399.036290921766 9224.531851347516 9535.189059554315 10140.044834324308 10985.326634020928 10023.798505446115 9588.83552397388 10533.958235104019 9289.68965138986 0.9999140979603128 1.0091083591456973 1.011770752698455 0.992986008953206 1.0264270839368381 1.0915375233022153 1.1825289160631303 1.0790240451085924 1.032201923186881 1.1339408129234976 1.0 13.181414684727528 -6.984794777291792 12.36073906265959 1.0403675730006754 1.0050911575352093 0.11223770868358596 0.05641469966308511 1.6615513371142077 1336.8084818061473 0.008652757502652904 0.016274834934737494 1.0356314311941397e-07 6.984794777291792 -0.035276415465466116 ETVFTKS(ph)PYQEFTDHLVK ddPTM_A549_MK2206_60min_R1 2 ETVFTKSPYQEFTDHLVK 18 1 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 1 ET(0.015)VFT(0.131)KS(0.854)PYQEFTDHLVK;ET(0.003)VFT(0.171)KS(0.826)PYQEFT(0.001)DHLVK 153.83 7.2187e-19 59276000.0 2799.5 3576.7 3108.0 2980.1000000000004 3841.2 3311.7999999999997 2937.7 3621.0 4618.799999999999 4669.3 4927.1 True False 3271.987158796309 3758.7387526791063 3548.7611346457493 3710.224633781775 3276.1645684068726 3662.252477805081 3471.4420637952753 4134.287838847421 3572.6491747079835 3614.5018870303093 3703.5650889578264 0.8834695975917187 1.0148974467563106 0.9582013679809153 1.001798144399785 0.8845975404009375 0.9888451775085798 0.937324437511676 1.1162994950929293 0.9646513801957556 0.9759520354608971 1.0 11.854698976985176 ETVFTKS(ph)PYQEFTDHLVK ddPTM_A549_PD325901_60min_R1 3 ETVFTKSPYQEFTDHLVK 18 1 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 1 ET(0.001)VFT(0.031)KS(0.969)PYQEFTDHLVK;ET(0.004)VFT(0.143)KS(0.849)PYQEFT(0.005)DHLVK;ET(0.001)VFT(0.037)KS(0.962)PYQEFTDHLVK 187.62 3.0548999999999995e-40 137344000.0 10061.4 10752.9 10811.099999999999 11857.099999999999 12857.4 12449.9 11226.699999999999 12228.099999999999 13372.2 13400.099999999999 13668.099999999999 True False 11082.82592118879 11659.084620305834 11544.806258425557 12589.486137572087 11954.34057962203 12348.512142151187 11653.938211985971 11984.200952741128 12810.212937078137 12554.015399124628 11987.010349224609 0.9245696465011973 0.9726432430301533 0.9631097264525464 1.0502607214639177 0.9972745690000433 1.0301577943452733 0.9722139109306615 0.9997656299275939 1.0686745538604443 1.0473016234558183 1.0 13.549184264142324 -3.912159984978823 0.4985579828985014 1.0273163822012763 0.5686320550275867 0.5064919724959576 0.02912437440073669 8.997897768290882 0.5403743153347212 0.006354226296646618 3.285806618212504 0.00012241651594226079 3.912159984978823 -0.45868432717368957 ETVLS(ph)ALK ddPTM_A549_MK2206_60min_R1 1 ETVLSALK 8 0 A8CG34;A8CG34-2;C9JER0;C9J370;A0A0J9YWR1;Q6PJE2-5;Q6PJE2;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POMZP3;POM121 Nuclear envelope pore membrane protein POM 121C;POM121 and ZP3 fusion protein;Nuclear envelope pore membrane protein POM 121 1 ET(0.001)VLS(0.999)ALK 56.258 0.019156 1106800.0 273.7 336.48 230.67 232.43 587.58 316.8 264.38 441.33 465.2 436.43 591.78 True False 319.89386867746015 353.6053947777186 263.38247455879485 289.3753604341793 501.14776036251925 350.3235657251794 312.4144238098495 503.88987901644043 359.8329427717491 337.8401598862011 444.8246937028803 0.7191459314332324 0.7949320255451208 0.5921039867780375 0.6505379861565576 1.1266185700950762 0.7875542223363553 0.7023315661934137 1.1327830629677509 0.8089320306756592 0.7594905693609283 1.0 8.797093068874418 -2.0533044796212496 0.09654622647530728 1.0704953166537623 1.1089189645708328e-13 0.11691534564969941 0.16377702571311017 128.44195532318943 0.8654576956018902 1.130638338661743 18.25768976856092 0.008844952813966715 2.0533044796212496 -1.0704953166536515 ETVLS(ph)ALK ddPTM_A549_PD325901_60min_R1 2 ETVLSALK 8 0 A8CG34;A8CG34-2;C9JER0;C9J370;A0A0J9YWR1;Q6PJE2-5;Q6PJE2;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POMZP3;POM121 Nuclear envelope pore membrane protein POM 121C;POM121 and ZP3 fusion protein;Nuclear envelope pore membrane protein POM 121 1 ETVLS(1)ALK;ETVLS(1)ALK 88.681 0.0026793000000000003 3964600.0 1788.3000000000002 1387.6599999999999 1545.6 1564.34 1748.63 1549.73 1248.51 1406.23 1531.0900000000001 1585.3600000000001 2018.56 True False 1969.8468995231206 1504.6029781931927 1650.4937104478308 1660.9657289260892 1625.8122612460108 1537.1095126913438 1296.0227312608863 1378.1816394839059 1466.7436118088979 1485.260099040769 1770.2899167061128 1.1127255942282681 0.8499189675060286 0.9323296115919925 0.9382450372968076 0.918387573641653 0.8682812335910292 0.7320963188178403 0.7785061793992576 0.82853299788206 0.8389925768793374 1.0 10.78976993149206 -6.887353882580882 2.655324398221098 0.8869013617326317 0.9501524436599532 0.18587287612137926 0.0912277434489461 0.6618416985050537 9.458635438291108 0.016030948297465673 0.032924266287077474 1.296122701786564e-07 6.887353882580882 0.06325108192732154 ETVNS(ph)PAIYK ddPTM_A549_MK2206_60min_R1 2 ETVNSPAIYK 10 0 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 1 ET(0.001)VNS(0.999)PAIYK;ET(0.051)VNS(0.949)PAIYK 170.22 1.9387000000000002e-10 64780000.0 23188.7 26365.0 23220.0 21780.7 33538.0 25601.0 25197.0 24151.4 38540.0 36145.0 38048.0 True False 27102.385650716205 27706.865885979994 26512.945156523263 27116.97247777277 28604.604627519962 28310.080827431568 29774.968744749138 27574.934910560503 29810.75153573346 27979.81939620726 28599.63152862077 0.9476480710457332 0.9687840159147733 0.9270379980242306 0.9481581065348956 1.0001738868171857 0.9898757191714364 1.0410962363257081 0.9641709853137509 1.042347398983119 0.9783279679042983 1.0 14.803708939306402 -6.927054701695808 1.9573480299293706 1.0160276656747116 0.9469993573792785 0.4645191262213413 0.02582453931878737 0.16698676546793956 1.2891035538205062 0.003700956469332082 0.007922014526514245 1.1828925547439932e-07 6.927054701695808 -0.06902830829543305 ETVNS(ph)PAIYK ddPTM_A549_PD325901_60min_R1 2 ETVNSPAIYK 10 0 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 1 ETVNS(1)PAIYK;ETVNS(1)PAIYK 200.82 1.8519999999999999e-19 109002000.0 37896.0 37529.0 38764.0 38013.0 42247.0 42677.0 40807.0 42190.0 43589.0 41828.0 43606.0 True False 41743.17402243929 40691.700538036974 41394.758146868364 40360.97667621323 39279.71646423788 42329.45266151424 42359.93271544724 41348.48735258526 41757.10591483066 39186.97294158887 38242.73844120898 1.0915320325873519 1.0640373100005067 1.0824213912009732 1.055389292747972 1.0271156843180322 1.1068624891124836 1.1076595045767361 1.0812114675352233 1.0918963342288983 1.0246905566616646 1.0 15.222898213383246 -10.75164629505392 0.9474233405775166 0.9988798620415518 1.07844196056635 0.5410618887898194 0.023213260317830504 0.3156856145522192 0.4919312377697398 0.017366752041421685 0.004195976044627527 1.771551185530947e-11 10.75164629505392 0.07956209852479823 ETVQTTQS(ph)PTPVEK ddPTM_A549_MK2206_60min_R1 2 ETVQTTQSPTPVEK 14 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 ETVQTTQS(0.974)PT(0.026)PVEK;ETVQT(0.001)T(0.002)QS(0.982)PT(0.016)PVEK 191.89 1.1615000000000001e-26 22277000.0 6544.799999999999 6582.700000000001 6934.1 6357.8 8923.5 7028.1 6320.1 6879.7 9623.5 8865.8 9200.4 True False 7649.402235002708 6917.731313015006 7917.459647280272 7915.461285412484 7610.864970888973 7771.808877124794 7468.3803613005075 7854.918543197625 7443.792615571643 6863.009622434486 6915.686761877688 1.1060943762186546 1.0002956396389422 1.144855156095964 1.1445661953699224 1.1005219341112171 1.1237942296586405 1.0799188306893122 1.1358117875577298 1.0763634721868995 0.9923829489019687 1.0 12.755656809900259 -9.985861647897586 0.7135727208713353 1.0035459146091787 1.1036455786322357 0.5131475214284148 0.03930072523999991 0.41035494712691306 0.4211537579388078 0.020017779737751925 0.008457586143305065 1.0330904623793439e-10 9.985861647897586 0.10009966402305692 ETVSEAPPLLFS(ph)DEEEKEAQLGVK ddPTM_A549_MK2206_60min_R1 2 ETVSEAPPLLFSDEEEKEAQLGVK 24 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK 113.5 4.997600000000001e-13 28819000.0 2806.5699999999997 2441.6 2254.8599999999997 2098.29 3060.7 2862.08 2693.5 2557.9 3416.9 3617.0 3195.0 True False 3280.2504019514067 2565.8670110832095 2574.6330540757112 2612.371144195819 2610.4750844847727 3164.9434059050554 3182.8740847712743 2920.490158240214 2642.977605668078 2799.9171878844018 2401.5933224858945 1.3658642249038286 1.0684019592573128 1.0720520539300562 1.0877658260190979 1.0869763252766975 1.317851518103413 1.325317677631063 1.2160635736683378 1.1005100576030609 1.1658581666050776 1.0 11.229776155395102 -9.301115977896721 1.4598852264793565 1.0288057237278965 1.183782789427867 0.0914451166329232 0.11256971760345673 0.3501022658750761 1.5435494916806727 0.025095034964678818 0.02168308674959369 4.99901019094828e-10 9.301115977896721 0.1549770656999705 ETVSEAPPLLFS(ph)DEEEKEAQLGVK ddPTM_A549_PD325901_60min_R1 2 ETVSEAPPLLFSDEEEKEAQLGVK 24 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK 181.64 1.0971999999999998e-50 56356000.0 6623.200000000001 6882.4 7186.7 6071.9 8220.3 7610.3 7158.2 7307.299999999999 8175.2 7299.9 8087.0 True False 7295.582388257859 7462.404001784903 7674.432679137826 6446.947472714574 7642.9344864954755 7548.324239986928 7430.609218117343 7161.550169034048 7831.624774023806 6838.983068191271 7092.350267716756 1.028655116127891 1.0521764605666153 1.082071864678006 0.9090001521865111 1.0776307145016357 1.0642909550513449 1.0476934919500926 1.0097569774059636 1.1042354760271935 0.9642759889230552 1.0 12.79204807259348 ETVVKEDEGRRES(ph)INDR ddPTM_A549_MK2206_60min_R1 2 ETVVKEDEGRRESINDR 17 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 ETVVKEDEGRRES(1)INDR;ETVVKEDEGRRES(1)INDR 58.79600000000001 0.0016398 32591000.0 3086.6000000000004 3417.6 3148.5 3419.8 4466.0 3805.1 3341.6 3138.6000000000004 4976.7 5479.4 5161.9 True False 3607.5426198752234 3591.5412422501513 3595.0046436396833 4257.6511535206555 3809.0573160744248 4207.753156379042 3948.7254656289897 3583.506161559379 3849.485396156843 4241.599734391426 3880.057768807494 0.9297651825900453 0.9256411775935964 0.926533793527662 1.097316433726504 0.9817011866926686 1.0844563166574352 1.0176975965083634 0.9235703113411999 0.9921206398274716 1.0931795316271926 1.0 11.921862417010484 -6.109084932480109 23.887199583188213 1.0035120705751215 0.9271091440946608 0.3572559917619841 0.05275242750977342 14.342314917020293 3125.2523174209527 0.006090114080529799 0.0161129430258169 7.77884409772598e-07 6.109084932480109 -0.07640292648046065 ETYYLSDS(ph)PLLGPPVGEPR ddPTM_A549_PD325901_60min_R1 1 ETYYLSDSPLLGPPVGEPR 19 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 ETYYLS(0.004)DS(0.996)PLLGPPVGEPR 179.46 6.19e-35 5767600.0 1612.2 1828.6 1802.2 2022.4 1702.6 1737.8 1593.6 2081.9 1822.5 1491.3 2028.7 True False 1775.8693571610888 1982.702539472259 1924.5081295089808 2147.3190547963495 1583.0152496511319 1723.6479329657543 1654.2453200513798 2040.3748712810454 1745.9066629144718 1397.1390634931504 1779.182760988868 0.9981376821423688 1.1143894730467572 1.081680967074648 1.2069131411788587 0.8897429113866264 0.9687863274977735 0.9297781859868921 1.1468045419611683 0.9812969758902669 0.7852701218376362 1.0 10.796998999218587 -6.763361695038618 24.999813133682313 0.9906548228063375 1.0999595759404757 0.2994740838841333 0.09698034657763788 43.991438114866554 572123.3727309674 0.010175152644134556 0.019948361956838034 1.7244011545631184e-07 6.763361695038618 0.10930475313413812 EVAATEEDVTRLPS(ph)PT(ph)SPFSSLSQDQAATSK ddPTM_A549_MK2206_60min_R1 1 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 2 EVAAT(0.052)EEDVT(0.049)RLPS(0.544)PT(0.544)S(0.544)PFS(0.185)S(0.06)LS(0.019)QDQAAT(0.001)SK 46.464 0.006010499999999999 3378300.0 577.27 507.4 528.15 539.11 727.3 596.13 557.71 443.51 887.97 744.06 585.22 True False 674.6990631035345 533.2244927193725 603.0496117320306 671.1919742015676 620.3151334484843 659.2120809209317 659.0386878848288 506.3789006924106 686.8462127967111 575.9763292278872 439.89372274967 1.533777428980238 1.2121666328546683 1.3708984251071197 1.5258048466936691 1.4101477274352618 1.4985712385263317 1.498177068236701 1.1511391831807867 1.5613912571959436 1.3093533720544988 1.0 8.78101120401995 -10.91564075147829 1.046535496425584 0.9879702478528581 1.42284518217589 0.2239610578471839 0.15389164072330103 0.3012285506310956 0.5583203097018743 0.10093533712765115 0.021321282537048653 1.2143929813263138e-11 10.91564075147829 0.4348749343230319 EVAATEEDVTRLPS(ph)PTSPFSSLSQDQAATSK ddPTM_A549_MK2206_60min_R1 2 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 EVAATEEDVT(0.022)RLPS(0.923)PT(0.045)S(0.009)PFSSLSQDQAATSK;EVAATEEDVT(0.049)RLPS(0.815)PT(0.064)S(0.023)PFS(0.019)S(0.024)LS(0.006)QDQAATSK 130.88 2.7523e-28 213080000.0 2208.58 2898.4 2750.0 2309.0 3523.2 3367.8 3110.3999999999996 3000.2 4712.0 4073.2000000000003 4143.4 True False 2581.334309403234 3045.916179932654 3139.99135144009 2874.7051036549497 3004.9419471548167 3724.178360635289 3675.5194183302656 3425.4875377271565 3644.7395235178005 3153.061291039742 3114.479427977482 0.8288172611496528 0.9779856474796649 1.0081913925111958 0.9230130331995033 0.964829602071317 1.1957627098708246 1.1801392506603001 1.0998587779889883 1.1702564129263378 1.012387901077682 1.0 11.60477532770678 -7.120304242985523 6.88143564034585 1.0992801063106918 0.9430764760952073 0.5759664022890498 0.07215021418432278 0.18102805472050026 9.542776213180408 0.012360661328686996 0.021518478582264775 7.580463431241846e-08 7.120304242985523 -0.15620363021548456 EVAATEEDVTRLPS(ph)PTSPFSSLSQDQAATSK ddPTM_A549_PD325901_60min_R1 2 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 EVAATEEDVT(0.022)RLPS(0.751)PT(0.215)S(0.013)PFSSLSQDQAATSK;EVAATEEDVT(0.001)RLPS(0.326)PT(0.326)S(0.326)PFS(0.017)S(0.003)LS(0.001)QDQAATSK 171.2 3.7531e-58 223104300.0 6623.400000000001 6582.8 7520.9 6077.9 8211.599999999999 7874.9 6917.700000000001 6739.1 7767.0 7618.900000000001 8023.400000000001 True False 7295.80269211063 7137.555658338606 8031.3135008456875 6453.318079087585 7634.845544482104 7810.769425314774 7180.956859010687 6604.68336377832 7440.580000470069 7137.841353750397 7036.572664523141 1.0368403823774137 1.0143511619406134 1.1413672371121544 0.9171109838208311 1.0850233357178736 1.1100246949335097 1.0205191080048814 0.9386222069556232 1.057415357619178 1.014391763441573 1.0 12.780657184562322 -11.056660226422286 1.2217797340064798 0.998962526213481 1.0376440456954246 0.02725086533405685 0.06322405035789823 1.4609434902695315 3.707535217907899 0.04957595328225418 0.009801754056801866 8.776872178481898e-12 11.056660226422286 0.03868151948194354 EVAATEEDVTRLPSPT(ph)SPFSSLSQDQAATSK ddPTM_A549_MK2206_60min_R1 1 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 EVAATEEDVT(0.001)RLPS(0.076)PT(0.537)S(0.386)PFSSLSQDQAATSK 165.55 2.589e-47 16527000.0 1896.9 2076.4 2255.9 1898.5 2773.7 1818.9 1666.7 1510.5 2668.8 2462.7 2692.3 True False 2217.050345247623 2182.079890978527 2575.8205417140734 2363.6325852269033 2365.692404298172 2011.3747907118977 1969.5178158857557 1724.6180007122407 2064.3210611978584 1906.3743595805693 2023.7276063000847 1.0955280435695514 1.0782478255400947 1.2728099047002488 1.167959846902645 1.1689776810542651 0.9938960087564496 0.9732129016545665 0.85219868293703 1.0200587543360093 0.9420113426559078 1.0 10.982799401034987 -7.263877414468184 23.21974093035362 0.9925914917537427 1.1594215369155292 0.6721121586872569 0.06546876890580397 42.27073060663315 402587.2620289206 0.009898195184591391 0.01629100233312561 5.446563678243718e-08 7.263877414468184 0.16683004516178646 EVAATEEDVTRLPSPT(ph)SPFSSLSQDQAATSK ddPTM_A549_PD325901_60min_R1 1 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 EVAATEEDVTRLPS(0.236)PT(0.415)S(0.348)PFSSLSQDQAATSK 175.67 2.8676e-58 210090000.0 3313.8 4173.2 3676.3 4028.6 4463.5 4506.0 4352.6 4057.0 4572.5 4303.5 4001.7 True False 3650.214536509375 4524.8902098466715 3925.795825387788 4277.437472385568 4149.999158239061 4469.304629959539 4518.240574834109 3976.0799523450714 4380.333726297076 4031.7762755600934 3509.5162688663463 1.0400905016144797 1.2893201977685416 1.1186145111263182 1.218811125148959 1.182498908768303 1.2734816674331093 1.2874254537345693 1.1329424478289811 1.248130337834856 1.148812533318858 1.0 11.777056476274248 -10.815075907683612 0.9293962795438059 0.9929369605363985 1.2051033675802294 0.16599607601569744 0.08583274341429743 0.37790551690491897 0.5469831567003257 0.05639254823688349 0.01223486440766329 1.5308198756286688e-11 10.815075907683612 0.21216640704383094 EVAATEEDVTRLPSPTS(ph)PFSSLSQDQAATSK ddPTM_A549_MK2206_60min_R1 1 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 EVAATEEDVTRLPS(0.013)PT(0.069)S(0.912)PFS(0.004)S(0.001)LSQDQAATSK 160.35 6.8288e-47 21411000.0 1609.1 1902.7 1753.4 1535.9 2186.1 1251.2 1873.5 1252.8 2553.5 2550.8 2573.8 True False 1880.676741282066 1999.5393029112142 2002.0584856782027 1912.1955689491717 1864.5275859091585 1383.601153520658 2213.8906990231967 1430.3882365390898 1975.1363271015925 1974.5725083924622 1934.6544267337063 0.9720995725615084 1.0335382253703334 1.034840361158605 0.9883912819394562 0.9637522650787078 0.715167078110484 1.144333927770722 0.7393507681648482 1.0209246156876877 1.0206331844628966 1.0 10.917860175909453 -3.8181149924418945 17.676787662163584 0.9819181975064017 0.7747591731072299 0.0 0.1227173320242265 0.0 0.0 0.014560554509421142 0.0 0.00015201449726330802 3.8181149924418945 -0.2071590243991719 EVAENQQNQS(ph)SDPEEEKGSQPPPAAESQS(ph)SLRR ddPTM_A549_MK2206_60min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 2 EVAENQQNQS(0.512)S(0.477)DPEEEKGS(0.012)QPPPAAES(0.142)QS(0.444)S(0.414)LRR 61.261 0.00039846 7255100.0 0.0 293.97 212.65 265.03 335.58 301.03 187.63 259.03 243.08 342.5 533.42 True False 0.0 308.93181735260936 242.8069675940857 329.96236189764875 286.21662654013807 332.88479479245837 221.71994227794104 295.74829574610527 188.02276811899557 265.1290121234193 400.95709235694073 0.0 0.7704859777803644 0.605568456631598 0.8229368383485509 0.713833554751893 0.8302254808255569 0.5529767311873888 0.7376058470686028 0.46893488531090405 0.6612403600717347 1.0 8.647304047512439 -10.94579032586161 1.1654614220502963 1.0032462185084037 0.6187503506878564 0.047141101546112396 0.24233286019203656 0.4956386038942331 1.17977146561999 0.15523244211903067 0.035007750336491214 1.1329472096854564e-11 10.94579032586161 -0.38449586782054723 EVAENQQNQSS(ph)DPEEEK ddPTM_A549_MK2206_60min_R1 2 EVAENQQNQSSDPEEEK 17 0 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.152)S(0.848)DPEEEK;EVAENQQNQS(0.02)S(0.98)DPEEEK 150.59 9.8218e-17 6733400.0 1401.5500000000002 1541.63 1235.42 1793.3200000000002 1964.1299999999999 1783.9900000000002 1689.71 1677.48 1775.92 1807.74 1919.38 True False 1638.0973753923813 1620.0923821658773 1410.6211328713157 2232.6834805051953 1675.2090788672779 1972.7706376832805 1996.708435039491 1915.2679270670449 1373.6769555614878 1399.3702784700438 1442.7449738068788 1.1354032799504674 1.1229236015919315 0.9777342208645511 1.5475246984322921 1.1611262622852956 1.367373079441654 1.3839649219299681 1.3275166171699424 0.952127354799826 0.96993599276081 1.0 10.49460058966081 -8.767509516879002 24.98192785267862 0.9773934529232838 1.2543782326228983 0.4155003866543596 0.14731318409375926 99.81905892300377 410808.6310536654 0.025456475780600563 0.027441418092393897 1.708010291296378e-09 8.767509516879002 0.27698477969961444 EVAENQQNQSS(ph)DPEEEK ddPTM_A549_PD325901_60min_R1 3 EVAENQQNQSSDPEEEK 17 0 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.029)S(0.971)DPEEEK;EVAENQQNQS(0.141)S(0.859)DPEEEK;EVAENQQNQS(0.037)S(0.963)DPEEEK 223.76 1.6329999999999994e-63 12156100.0 2901.55 3136.0299999999997 3286.7799999999997 2545.84 3757.27 2655.2999999999997 2792.04 3857.64 3203.91 2906.41 3297.74 True False 3196.1132199917847 3400.3142539982437 3509.840655813744 2703.090754777856 3493.372317077828 2633.6761171619087 2898.292610062913 3780.696343939962 3069.26080459715 2722.8987765889647 2892.1388860962347 1.1051036433128736 1.175709185456144 1.2135795665578404 0.9346337991487148 1.2078853937035954 0.9106326566207216 1.0021277415120906 1.3072319459191286 1.0612425355339667 0.9414827170573029 1.0 11.497921119617482 -14.999998216535587 0.05111618738119047 0.5795587237076572 1.3028744499022273 0.14116235541342648 0.11769064242000879 598.2832876891863 2.331231370397447 34.04214116352036 7.742301337925442 1.0000041065870023e-15 14.999998216535587 0.7233157261945702 EVAENQQNQSS(ph)DPEEEKGSQPPPAAES(ph)QSSLRR ddPTM_A549_PD325901_60min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 2 EVAENQQNQS(0.46)S(0.496)DPEEEKGS(0.044)QPPPAAES(0.376)QS(0.324)S(0.3)LRR 68.811 0.00015372 10098000.0 166.45 269.02 257.32 307.6 368.57 425.22 300.87 223.08 427.39 315.16 424.94 True False 183.3478814659864 291.69125952577224 274.78328259086175 326.599753389714 342.6829146974732 421.7571493012417 312.31977249238145 218.63049439712555 409.42828458876016 295.2607438144578 372.67507391660183 0.4919778496026178 0.7826959191562344 0.7373267004499299 0.8763659719909288 0.9195219607688592 1.1317020611784292 0.8380484619217468 0.5866517771082571 1.0986199862682071 0.792273925678571 1.0 8.541774518528948 -4.663685657493893 0.370415219021547 1.0234884481892927 6.124854954789694e-19 0.23562929554565493 0.16390533266665666 5.921320185033079 0.3955424824037101 0.04111482843662635 2.9556168489461054 2.169273657802892e-05 4.663685657493893 -1.0234884481892927 EVAENQQNQSS(ph)DPEEEKGSQPPPAAESQSSLRR ddPTM_A549_MK2206_60min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.187)S(0.811)DPEEEKGS(0.002)QPPPAAESQSSLRR 108.15 5.123600000000001e-15 21133000.0 542.35 482.51 757.78 705.81 1231.2 572.26 939.71 866.94 1211.1 970.63 902.29 True False 633.8854208155664 507.06769803315797 865.2445986524626 878.7334816850145 1050.0921109607777 632.8161733645559 1110.4431431967373 989.8313998924001 936.7877837292891 751.3640088681877 678.2264910628472 0.9346220313839495 0.7476377061570292 1.2757458018139924 1.2956342656388329 1.5482912047790713 0.9330454969001153 1.6372748010131015 1.4594407811190588 1.381231485460338 1.1078364215628422 1.0 9.405623325920129 -5.767478466552315 24.973138858799736 1.253069192279576 0.8411298292636611 0.3896255994297785 0.2134445220843097 111.87271131904754 462630.77356591425 0.032218271251361265 0.10403323005709318 1.7081324115987432e-06 5.767478466552315 -0.41193936301591494 EVAENQQNQSS(ph)DPEEEKGSQPPPAAESQSSLRR ddPTM_A549_PD325901_60min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.252)S(0.748)DPEEEKGSQPPPAAESQSSLRR 146.78 1.4853e-40 20967000.0 1297.8 1296.6 1185.7 1492.1 2085.3 1598.2 1767.6 1710.1 2052.5 1795.9 1600.1 True False 1429.5517006101359 1405.8690324180952 1266.1687321933186 1584.2636281950327 1938.8357218944586 1585.1847890815222 1834.8669852678336 1675.9907139525033 1966.240562761016 1682.5065675097878 1403.2978438696152 1.0187086845855369 1.0018322472023402 0.9022808220825302 1.1289575018703097 1.3816280915447638 1.1296139276536983 1.3075392321619763 1.1943228739886989 1.4011569755847966 1.1989661174638808 1.0 10.454605531873408 -6.468548911402598 6.06650641174501 1.2110839237022668 0.9808961414731368 0.5020061611516894 0.11052014378198143 0.2070795571115982 16.98639769019268 0.021553034433149796 0.05005678889725376 3.3997821439481427e-07 6.468548911402598 -0.23018778222913006 EVAENQQNQSSDPEEEKGSQPPPAAESQS(ph)SLRR ddPTM_A549_MK2206_60min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQSSDPEEEKGSQPPPAAES(0.117)QS(0.441)S(0.441)LRR 128.0 4.5763e-30 85320000.0 2984.2 2531.0 2208.6 2548.4 3181.6 2155.7 2522.2 2511.3 3330.3 3175.5 3310.2 True False 3487.8600033148605 2659.8170892249354 2521.8126904693054 3172.758114402024 2713.5908546400346 2383.814743162152 2980.4510921143883 2867.284465533699 2575.992367396292 2458.15234451947 2488.1859831276397 1.4017682066236201 1.068978407265825 1.0135145473729408 1.275129003987829 1.0905900415165357 0.9580532803121519 1.1978409621807986 1.1523593834933248 1.0352893171427162 0.9879295041400331 1.0 11.280878610527633 -2.0000000000000004 0.18469225840703146 0.9954757841097672 2.0651583428019915 0.3140882371097711 0.1085230022081369 47.427042235118584 0.5053275737431513 0.10409512848633962 14.507753681939867 0.00999999999999999 2.0000000000000004 1.0696825586922243 EVAENQQNQSSDPEEEKGSQPPPAAESQSS(ph)LRR ddPTM_A549_MK2206_60min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQSSDPEEEKGSQPPPAAES(0.082)QS(0.236)S(0.682)LRR 162.23 1.2195e-51 94082000.0 2799.4 2743.9 3013.1 2346.1 3234.2 2475.9 2816.1 2994.5 3816.9 3916.3 4201.9 True False 3271.8702812410766 2883.5527898555097 3440.4028876451407 2920.8946053204295 2758.453464318833 2737.8980946305924 3327.74891781117 3418.979545271636 2952.3782443368214 3031.6051100115255 3158.452263459618 1.0359093658288272 0.9129638662630929 1.0892686039448598 0.9247866871734896 0.8733560726029004 0.8668480211987214 1.0536011439242436 1.082485743041324 0.9347547463335498 0.9598388252006855 1.0 11.625002052292622 -6.226389817813221 0.0017015804708024923 1.9355380781458347 2.530193916870062e-05 0.0 0.07729603298816441 1408464.9509080756 486.1589457877117 273913.05831812875 279097.0516975989 5.937589680267133e-07 6.226389817813221 -1.935512776206666 EVAENQQNQSSDPEEEKGSQPPPAAESQSS(ph)LRR ddPTM_A549_PD325901_60min_R1 2 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQSSDPEEEKGSQPPPAAES(0.016)QS(0.06)S(0.924)LRR;EVAENQQNQSSDPEEEKGSQPPPAAES(0.069)QS(0.268)S(0.664)LRR 232.17 3.940599999999999e-116 239810000.0 4611.7 4950.6 5600.6 4821.7 5861.0 5360.6 5812.1 5483.5 5451.6 5260.1 6676.3 True False 5079.876389045892 5367.804436132211 5980.690395143715 5119.525458124783 5449.343579352337 5316.945050901268 6033.282646003158 5374.127290777471 5222.4882104496755 4927.97638830572 5855.15742455266 0.867590061326831 0.9167651775891092 1.021439725952483 0.8743617100125911 0.9306912153209395 0.908078923481291 1.0304219354894812 0.9178450554107962 0.8919466773941913 0.8416471208171183 1.0 12.51549224489639 EVAES(ph)PRPR ddPTM_A549_MK2206_60min_R1 2 EVAESPRPR 9 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 EVAES(1)PRPR;EVAES(1)PRPR 129.89 1.3934e-05 125272000.0 5455.1 5205.6 5060.4 3730.3 6739.0 5603.7 4459.0 5232.9 7850.2 6920.4 7449.8 True False 6375.787515609842 5470.542805084677 5778.0408126645225 4644.223667459528 5747.702027099319 6196.6798145649855 5269.142581769112 5974.679600084137 6072.142234193429 5357.076833573463 5599.809055979783 1.1385723069970441 0.9769159538114842 1.0318281846582633 0.8293539335060311 1.0264103596463896 1.1065876983694347 0.9409504018967277 1.0669434511707228 1.084348086424351 0.9566534822920225 1.0 12.451161919209543 -6.981640799405128 24.99890016555017 1.0400520638644715 0.9871575077350818 0.015419283725087385 0.08280408087073919 480.94680558579853 654879.7051491055 0.011162596651660925 0.021092715334418616 1.0431798762597789e-07 6.981640799405128 -0.05289455612938965 EVAES(ph)PRPR ddPTM_A549_PD325901_60min_R1 2 EVAESPRPR 9 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 EVAES(1)PRPR;EVAES(1)PRPR 125.74 1.9584e-05 142283000.0 4739.5 4629.9 4766.0 4328.9 5740.4 4882.4 5591.7 5506.9 4943.7 4671.0 4747.200000000001 True False 5220.650550964508 5020.077921635461 5089.449420286208 4596.2863213547835 5337.214107304922 4842.639353154562 5804.49520339565 5397.0605594205235 4735.933481179847 4376.0722628421545 4163.324494980213 1.2539619617109188 1.2057858876213587 1.222448412662198 1.1039942543264643 1.2819596727903595 1.1631664452274642 1.39419716392374 1.2963343515327346 1.1375364776130321 1.0511004530438248 1.0 12.02352029306918 -9.471727078812615 1.15062222968664 1.031038216281593 1.2348650459755421 0.5315558715813604 0.07528095991710762 0.22267572494826393 0.6126008004121178 0.02036576479206196 0.015558055682817797 3.374993347996301e-10 9.471727078812615 0.20382682969394916 EVATAIR ddPTM_A549_PD325901_60min_R1 2 EVATAIR 7 0 H0YEN5;P15880;I3L404;E9PM36;E9PMM9;E9PPT0 H0YEN5 RPS2 40S ribosomal protein S2 0 ; 111.04 0.022782 17199100.0 6814.1 7126.5 6919.6 6579.8 8367.6 6815.700000000001 6284.6 7748.299999999999 6967.0 7636.7 8474.6 False True 7505.86241572471 7727.075165453927 7389.205666935056 6986.219302189981 7779.888642652895 6760.195198938133 6523.763892065074 7593.7540780762365 6674.201218395127 7154.51745871262 7432.277924915595 1.0099006645812363 1.0396644532828985 0.9942047029974289 0.9399835922133282 1.046770414299496 0.9095724443074975 0.8777610253506716 1.0217263340784548 0.8980021045796567 0.9626278149163631 1.0 12.859588735979067 -6.045487826101866 3.587255447791031 0.9537307403921742 1.0244674808837284 0.22157476804798837 0.04956516594280063 0.26703745815724966 6.988310677888569 0.007516276053263379 0.023272644151407326 9.005590063593215e-07 6.045487826101866 0.0707367404915542 EVDEDS(ph)EPER ddPTM_A549_MK2206_60min_R1 4 EVDEDSEPER 10 0 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPER;EVDEDS(1)EPER;EVDEDS(1)EPER;EVDEDS(1)EPER 238.9 1.6672999999999997e-45 191485200.0 14727.4 13928.519999999999 12844.9 11894.099999999999 19715.24 17695.65 16506.73 17698.87 19386.95 18410.89 18273.82 True False 17213.02506963985 14637.422174480946 14666.499967313752 14808.155033946428 16815.15431262051 19568.19193757819 19505.78917442605 20207.739023016125 14995.836779597501 14251.857162081575 13735.92616222509 1.2531390214499742 1.0656305225879157 1.0677474379301641 1.0780601802206868 1.2241733184955192 1.4245993831411459 1.4200563503368668 1.4711595551954149 1.0917237470915697 1.0375606998584002 1.0 13.745666568783875 -8.97433674190992 18.572694694552624 1.0404630409518474 1.2455272880030948 0.3169201408478134 0.13738151815209085 10.067091866434506 7286.221310001952 0.0274645013399127 0.02855547532022488 1.0608726620549234e-09 8.97433674190992 0.20506424705124737 EVDEDS(ph)EPER ddPTM_A549_PD325901_60min_R1 2 EVDEDSEPER 10 0 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPER;EVDEDS(1)EPER 228.13 3.6319e-35 239970000.0 22298.6 22327.4 21841.0 22242.9 25054.1 20372.9 21841.8 22224.1 24172.2 24024.4 24170.4 True False 24562.337456638277 24209.00835601711 23323.261600602422 23616.79341570892 23294.38644795279 20206.98985701348 22673.00165129156 21780.822891030828 23156.3264950898 22507.49528397025 21197.594028789543 1.1587323270404606 1.1420639683512013 1.1002787188454455 1.1141261307124637 1.098916528749229 0.9532680845556966 1.0696025983183841 1.027513917921495 1.0924035276663948 1.0617948080995259 1.0 14.371612904728774 -2.00000000006656 0.2570942239031881 1.0302231464807694 1.9542942299474693 0.5067370801530104 0.040980752040137215 30.314196689592855 0.37083884763929437 0.02019690840511717 12.42838998297134 0.009999999998467398 2.00000000006656 0.9240710834666999 EVDEDS(ph)EPEREVR ddPTM_A549_MK2206_60min_R1 6 EVDEDSEPEREVR 13 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR 218.11 5.5897e-38 881347200.0 12906.890000000001 14119.25 13623.8 12859.679999999998 18213.309999999998 12742.100000000002 12137.99 12464.289999999999 19445.569999999996 19413.349999999995 20819.649999999998 True False 15085.257488836052 14837.859516807259 15555.859699545272 16010.302177292973 15534.156226025856 14090.46056447857 14343.305666312555 14231.141277787212 15041.1794431944 15027.860751842869 15649.556311891529 0.9639415449352589 0.9481329196235748 0.99401282627578 1.023051507545126 0.9926259835380774 0.900374444083871 0.9165311386760274 0.9093638818995453 0.961124976544233 0.9602739178249893 1.0 13.93383413474519 -10.261115384398519 1.084451707888919 0.9962107154445846 0.9571812493494538 0.02303069917145628 0.03764395417025241 0.7066787007124525 1.6461878798866978 0.016054280972417678 0.0073250556677089945 5.4813131673208244e-11 10.261115384398519 -0.039029466095130805 EVDEDS(ph)EPEREVR ddPTM_A549_PD325901_60min_R1 6 EVDEDSEPEREVR 13 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR 206.95 4.8429999999999997e-32 1221546100.0 16160.34 17200.37 18838.88 19670.69 22320.0 21306.260000000002 20846.730000000003 22181.9 20037.769999999997 20291.47 21864.9 True False 17800.92582018647 18649.905544603756 20117.39968418831 20885.703845921675 20752.320199819856 21132.748882627984 21640.063717918383 21739.464603136097 19195.65221012218 19010.263121236076 19175.655913020906 0.9283085752544741 0.9725824049616917 1.0491114241640063 1.0891780672670284 1.0822221828526002 1.102061331225606 1.1285175232636533 1.1337012252276741 1.0010427959904984 0.9913748560917531 1.0 14.226988306236109 -4.330797995632491 13.29753423602037 1.0299004135844887 1.0410567854711705 0.0 0.06684098000170455 0.0 51145168.86929425 0.009829109690042269 0.0 4.6687648912790705e-05 4.330797995632491 0.011156371886681837 EVDEIS(ph)PEDDQR ddPTM_A549_MK2206_60min_R1 2 EVDEISPEDDQR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 EVDEIS(1)PEDDQR;EVDEIS(1)PEDDQR 55.452 0.018447 2163250.0 451.03999999999996 506.65 466.78 451.24 288.64 404.9 354.43 337.90999999999997 539.8 690.39 827.6500000000001 True False 527.1645251307335 532.4363209228815 532.9764229182567 561.7938202569337 246.181438359096 447.74624924913246 418.8253431837691 385.8097773059737 417.53616188346984 534.4304195033209 622.1216630220505 0.8473656464074113 0.8558395448512292 0.8567077062213889 0.9030288666173991 0.39571269253546365 0.7197085005433456 0.6732209599473862 0.6201516523823396 0.671148726529188 0.8590448641624918 1.0 9.28105293327324 -10.749823839001618 1.014627427351316 0.9990771809964966 0.7235126892078639 0.21181984253891561 0.14244743072113736 0.49373666289794765 0.9075102889023549 0.09637228980180577 0.02498797731905697 1.7790008721614668e-11 10.749823839001618 -0.2755644917886326 EVDEIS(ph)PEDDQR ddPTM_A549_PD325901_60min_R1 2 EVDEISPEDDQR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 EVDEIS(1)PEDDQR;EVDEIS(1)PEDDQR 97.95299999999999 0.00025241 2850400.0 888.47 618.8 434.36 1045.79 1278.5 2010.2800000000002 792.21 1060.09 1220.2 1002.09 1028.1399999999999 True False 978.666820342955 670.9484476787891 463.83828161886635 1110.3860731385846 1188.7025705855592 1993.9089461862104 822.3579850639463 1038.9456733254829 1168.9192373598014 938.8178663822501 901.6852979164462 1.0853751553944515 0.7441048991584666 0.5144126034778128 1.2314563359349322 1.3183120245304356 2.2113135822371746 0.9120232823627 1.152226476051244 1.2963716277296098 1.041181295238602 1.0 9.816480188270983 -6.28554074469556 23.351887131706675 1.2215100379686716 0.7775783226515749 0.27250847250855403 0.3492938220236768 355.3302881241 344280.27133417764 0.05000520514281567 0.11627801379127123 5.181544774433924e-07 6.28554074469556 -0.44393171531709674 EVDEQMLNVQNK ddPTM_A549_MK2206_60min_R1 3 EVDEQMLNVQNK 12 0 Q5JP53;P07437;Q5ST81;P68371;Q9BVA1;Q13885 Q5JP53;P68371;Q9BVA1 TUBB;TUBB4B;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ;; 237.84 4.7521e-50 16851400.0 13417.899999999998 14346.800000000001 14163.7 11792.8 15980.7 13043.599999999999 11821.0 12418.7 19290.6 18987.3 19298.5 False True 15682.513483841043 15076.990839862618 16172.325637960746 14682.0365293989 13629.960199505276 14423.865094359064 13968.722686497575 14179.08875567369 14921.309900758177 14698.055742747443 14506.149838495778 1.0810941330706156 1.0393516548306958 1.1148599606384422 1.0121249740876357 0.939598746135566 0.9943275958781047 0.9629517716291609 0.9774536257750388 1.0286195900969302 1.0132292790566932 1.0 13.824377035688492 -6.397475896398416 6.748693165721192 1.0005204917096013 1.0741044953246102 0.6255312398653698 0.02951330607183702 0.15067447791813474 7.655638351780442 0.004526621983792978 0.010580976187885179 4.0042769168845645e-07 6.397475896398416 0.07358400361500883 EVDEQMLNVQNK ddPTM_A549_PD325901_60min_R1 3 EVDEQMLNVQNK 12 0 Q5JP53;P07437;Q5ST81;P68371;Q9BVA1;Q13885 Q5JP53;P68371;Q9BVA1 TUBB;TUBB4B;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ;; 234.72 6.198899999999999e-50 24120300.0 15340.7 15317.5 16042.8 15914.0 17689.9 17156.9 16579.1 17334.9 17499.0 18769.8 17261.0 False True 16898.07657077354 16608.359481770927 17131.56088119337 16896.97163668371 16447.422450841987 17017.17989475206 17210.026722931623 16989.14182053402 16763.577884411712 17584.671624725903 15138.006426494232 1.1162682915234379 1.0971299003218358 1.131692007423782 1.1161953007967398 1.0864985776499634 1.124136125676954 1.136875374343281 1.1222839614336515 1.1073834567194025 1.1616240031414946 1.0 13.885887604160754 -10.458338211611974 0.6737911955489444 0.9945750499858078 1.1167728810482518 0.0 0.049385769402312533 0.18966393870368511 0.14682186734148817 0.01267968482622949 0.003166445841268587 3.4806614911506937e-11 10.458338211611974 0.12219783106244397 EVDFDS(ph)DPMEECLR ddPTM_A549_MK2206_60min_R1 4 EVDFDSDPMEECLR 14 0 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 EVDFDS(1)DPMEECLR;EVDFDS(1)DPMEECLR;EVDFDS(1)DPMEECLR;EVDFDS(1)DPMEECLR 105.65 7.4222e-06 6246340.0 2274.08 2692.6399999999994 2304.83 2256.9399999999996 3238.16 2819.48 2469.35 2193.8999999999996 3142.09 3199.5099999999998 3526.55 True False 2657.8891080819826 2829.6838748046735 2631.68955146897 2809.8904013178867 2761.830953564612 3117.835502180649 2917.998931215869 2504.892043536966 2430.4116318866813 2476.7384688437987 2650.810307171401 1.002670429072737 1.067478826059094 0.9927868261072087 1.0600118739979683 1.041881777090145 1.1761820503510856 1.1007950751216058 0.94495333625357 0.9168561120015033 0.9343325933746844 1.0 11.37221771884508 -8.26936013859053 24.616360142392747 0.9584567484050099 1.0639908436809526 0.5436112917305089 0.05000837009244096 334.67207781484774 1040100.8201478042 0.009154375904253009 0.011174729882094623 5.378236074545693e-09 8.26936013859053 0.10553409527594271 EVDFDS(ph)DPMEECLR ddPTM_A549_PD325901_60min_R1 3 EVDFDSDPMEECLR 14 0 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 EVDFDS(1)DPMEECLR;EVDFDS(1)DPMEECLR;EVDFDS(1)DPMEECLR 113.76 4.5386e-06 10046500.0 1756.68 1648.04 2118.15 2097.45 2376.24 1641.9499999999998 1884.8500000000001 1662.65 1277.56 2072.08 1790.13 True False 1935.016860400534 1786.9261145968821 2261.900396470676 2227.004722845432 2209.341099982971 1628.5785035867882 1956.578998179495 1629.4871414263077 1223.8685960345738 1941.2485151766157 1569.9553585690371 1.232529861335827 1.1382018634119677 1.4407418555724565 1.4185146798538741 1.407263644742557 1.0373406445589537 1.2462640975746295 1.0379194112318786 0.7795563035308787 1.2364991810633394 1.0 10.61650782155815 -8.131524491022711 1.3826331959468618 0.8967590198312945 1.3063129050220312 0.32725340370992817 0.16063376988626898 0.19270631730150797 0.7252396719092722 0.02514051073194719 0.03445146185282057 7.387126038474937e-09 8.131524491022711 0.40955388519073677 EVDGLLTSEPMGS(ph)PVSSK ddPTM_A549_MK2206_60min_R1 10 EVDGLLTSEPMGSPVSSK 18 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EVDGLLTSEPMGS(0.999)PVS(0.001)SK;EVDGLLTSEPMGS(0.992)PVS(0.006)S(0.002)K;EVDGLLTSEPMGS(0.999)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(0.986)PVS(0.01)S(0.003)K;EVDGLLTSEPMGS(1)PVSSK;EVDGLLT(0.003)S(0.123)EPMGS(0.868)PVS(0.004)S(0.002)K;EVDGLLTSEPMGS(0.96)PVS(0.037)S(0.003)K;EVDGLLTSEPMGS(1)PVSSK 302.66 5.3859999999999985e-152 240064600.0 21720.89 23114.51 23785.71 28195.05 33884.9 25500.43 23773.160000000003 25944.280000000002 36667.299999999996 34118.5 33482.9 True False 25386.845207225295 24290.93982894532 27158.881341040767 35102.838515723866 28900.476097055605 28198.868576784516 28092.435447232627 29621.961141025236 28362.215095646065 26411.107153672638 25168.171848971186 1.0086884879667193 0.9651451831587154 1.0790963087829901 1.3947313585733796 1.1482946107679644 1.1204178335240196 1.11618895547159 1.1769611761545609 1.1269080355077694 1.0493852041443472 1.0 14.619312806210827 -10.489367437004116 0.8206797366438094 1.0001568390993645 1.1292993192039422 0.11721278389512735 0.1042330802297163 0.9374315574042841 1.1397184742151378 0.07208182935853766 0.020914359272497046 3.2406532425455646e-11 10.489367437004116 0.12914248010457774 EVDGLLTSEPMGS(ph)PVSSK ddPTM_A549_PD325901_60min_R1 13 EVDGLLTSEPMGSPVSSK 18 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EVDGLLTSEPMGS(0.998)PVS(0.002)SK;EVDGLLTS(0.003)EPMGS(0.992)PVS(0.004)S(0.001)K;EVDGLLT(0.001)S(0.116)EPMGS(0.882)PVS(0.001)SK;EVDGLLTSEPMGS(0.995)PVS(0.004)S(0.001)K;EVDGLLT(0.035)S(0.029)EPMGS(0.851)PVS(0.064)S(0.02)K;EVDGLLTSEPMGS(0.999)PVS(0.001)SK;EVDGLLTSEPMGS(0.994)PVS(0.004)S(0.001)K;EVDGLLTS(0.001)EPMGS(0.996)PVS(0.003)SK;EVDGLLTSEPMGS(0.716)PVS(0.258)S(0.026)K;EVDGLLTS(0.001)EPMGS(0.991)PVS(0.006)S(0.002)K;EVDGLLTSEPMGS(0.999)PVS(0.001)SK;EVDGLLTSEPMGS(0.997)PVS(0.003)SK;EVDGLLTSEPMGS(1)PVSSK 334.96 1.2424999999999996e-195 361817500.0 40070.549999999996 39737.299999999996 40007.5 42377.200000000004 47481.1 42358.50000000001 44437.8 48265.7 43762.69999999999 44916.299999999996 49005.299999999996 True False 44138.482737620165 43086.10172906645 42722.64953464132 44994.7433983959 44146.191336902615 42013.54641991594 46128.90479629721 47303.00274979085 41923.50590788866 42080.277152536306 42977.95877019167 1.0270027707372973 1.0025162423244212 0.9940595309117514 1.0469260217542722 1.0271821324264754 0.9775603035166803 1.0733153950599197 1.1006340017850944 0.9754652642313403 0.9791129768992666 1.0 15.391309343421387 EVDIYTVK ddPTM_A549_MK2206_60min_R1 1 EVDIYTVK 8 0 E9PKG1;Q99873-2;Q99873-3;Q99873;Q9NR22-2;Q9NR22 E9PKG1 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 0 57.598 0.024028 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EVDKT(ph)PPPQPPLISSMDSISQK ddPTM_A549_MK2206_60min_R1 3 EVDKTPPPQPPLISSMDSISQK 22 1 Q92625;A0A3B3ISP1;A0A3B3ITU5 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EVDKT(0.959)PPPQPPLIS(0.018)S(0.021)MDS(0.002)IS(0.001)QK;EVDKT(0.992)PPPQPPLIS(0.003)S(0.003)MDS(0.001)ISQK;EVDKT(1)PPPQPPLISSMDSISQK 80.359 4.2531e-05 12062600.0 3723.9399999999996 4265.4 3616.89 3338.7200000000003 4284.900000000001 4112.16 3486.68 3443.92 5069.700000000001 5438.299999999999 5136.1 True False 4352.450030408263 4482.490641003572 4129.819388767331 4156.706549880834 3654.5968861727083 4547.306041769108 4120.164623683053 3932.106206562666 3921.4210446473267 4209.784252936618 3860.6646208512675 1.1273836134071025 1.1610670910894076 1.0697172104674337 1.0766815971091241 0.9466237669116356 1.1778557549934077 1.0672164065819751 1.0185049966074613 1.015737296492401 1.0904299301731033 1.0 11.914633516266306 -2.0000000000063487 0.17456214636723122 0.9881398494128006 1.6444814295684547 0.14948518838399516 0.06178690621359421 39.334632928265115 0.4056834911060111 0.061655873805626864 6.863249175952349 0.009999999999853815 2.0000000000063487 0.656341580155654 EVDKT(ph)PPPQPPLISSMDSISQK ddPTM_A549_PD325901_60min_R1 4 EVDKTPPPQPPLISSMDSISQK 22 1 Q92625;A0A3B3ISP1;A0A3B3ITU5 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EVDKT(1)PPPQPPLISSMDSISQK;EVDKT(0.997)PPPQPPLIS(0.001)S(0.002)MDSISQK;EVDKT(1)PPPQPPLISSMDSISQK;EVDKT(1)PPPQPPLISSMDSISQK 93.147 3.6527e-07 25005200.0 7690.299999999999 7727.6 7263.9 7350.700000000001 9500.099999999999 7834.609999999999 8437.0 9335.2 8680.4 8769.3 9511.9 True False 8471.01359470036 8378.831972014556 7756.87193537914 7804.73604434906 8832.845749565795 7770.807533716662 8758.074651903555 9149.002112677268 8315.592974904128 8215.604901421893 8341.99660090206 1.0154659609648304 1.0044156540543916 0.9298579592492704 0.935595687428726 1.0588407274837124 0.93152849437464 1.0498775138504013 1.0967400911776854 0.9968348553396584 0.9848487471852362 1.0 13.026177009037063 -6.746320707638255 24.99902035424794 1.0083102739571401 0.9707342592016118 0.1614606219423429 0.04747112686827658 409.8872581169669 677752.7915131333 0.006700236332262363 0.013903690162572542 1.7934087831220054e-07 6.746320707638255 -0.0375760147555283 EVDQDDEENS(ph)EEDEMDSGTMVR ddPTM_A549_MK2206_60min_R1 2 EVDQDDEENSEEDEMDSGTMVR 22 0 F5H5B4;Q13043-2;Q13043 F5H5B4 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit 1 EVDQDDEENS(0.643)EEDEMDS(0.212)GT(0.144)MVR;EVDQDDEENS(0.98)EEDEMDS(0.016)GT(0.003)MVR 99.135 4.6169e-08 13459100.0 138.66 246.65 452.88 278.08 310.59 153.15 453.03000000000003 431.98 647.11 425.94 588.66 True False 162.0624180884788 259.2034314726709 517.1051939055233 346.2096124834855 264.902622436085 169.35623134725768 535.3396868846966 493.2144878832664 500.5406182223271 329.71985817182264 442.4794758104994 0.3662597407295005 0.5857976372754516 1.1686535131563567 0.7824308954654353 0.5986777622868428 0.382743699099363 1.209863318302172 1.1146607127479404 1.1312177074551895 0.7451641854525964 1.0 8.789466727833352 -7.775709957843869 24.99992038316368 1.0784125471801236 0.6722385847283018 0.41086040711447647 0.23109791200916313 161.2879839102358 282551.82855696336 0.033748420593409864 0.04674689294667817 1.676061854785902e-08 7.775709957843869 -0.4061739624518218 EVDQDDEENS(ph)EEDEMDSGTMVR ddPTM_A549_PD325901_60min_R1 2 EVDQDDEENSEEDEMDSGTMVR 22 0 F5H5B4;Q13043-2;Q13043 F5H5B4 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit 1 EVDQDDEENS(0.991)EEDEMDS(0.005)GT(0.004)MVR;EVDQDDEENS(1)EEDEMDSGTMVR 105.17 1.3306e-10 20165600.0 1054.21 592.24 905.1600000000001 1261.46 1076.96 1513.49 887.23 788.87 1338.81 1188.93 1576.33 True False 1161.2326231316165 642.1501432664608 966.5896007692544 1339.3775192164767 1001.3180449103041 1501.1646392360108 920.9940231608848 773.1353689934574 1282.5444715371862 1113.860756895937 1382.45140317917 0.8399807909783843 0.4645010607893579 0.6991852288958771 0.9688423883373853 0.7243061438598216 1.0858715436823605 0.666203543244204 0.5592495817324992 0.9277320480038345 0.805714222094487 1.0 10.433013051469496 -8.140380806853189 0.04992351430093564 1.6656134437778707 2.2057724681711373e-06 0.004380918301399417 0.18353874110647705 43.261668832417676 1.40637213388661 21.89776108848 24.38599770763737 7.238010239242969e-09 8.140380806853189 -1.6656112380054025 EVDVGLAADVGTLQR ddPTM_A549_MK2206_60min_R1 1 EVDVGLAADVGTLQR 15 0 Q13011;M0R248 Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial 0 52.693000000000005 0.053047000000000004 631090.0 1212.9 1412.7 1145.5 1354.2 1590.3 1001.8 930.3 1215.8 1677.0 1800.4 2033.6 False True 1417.6078674420592 1484.6003958704334 1307.949124754409 1685.9790607923485 1356.368976657671 1107.8098110589797 1099.3234680017506 1388.1433732313426 1297.1621776187087 1393.6883895678952 1528.6009954952476 0.9273890777382177 0.9712151177746953 0.8556511009798538 1.102955621356319 0.8873270269055559 0.7247213722375362 0.7191696664083249 0.9081136132464714 0.8485943561736622 0.9117411238610097 1.0 10.577996159678342 -3.8797907928283095 8.432277620945316 0.9078455245736404 0.9134105433353584 0.0 0.10734917655039398 0.0 0.0 0.015130781361784217 0.0 0.0001318891918629166 3.8797907928283095 0.005565018761717999 EVEDKES(ph)EGEEEDEDEDLSK ddPTM_A549_MK2206_60min_R1 4 EVEDKESEGEEEDEDEDLSK 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK 325.92 1.4379999999999997e-184 2931820000.0 75430.8 83270.4 76152.7 74550.4 99355.4 86330.0 78389.1 86851.1 109264.0 114482.0 106685.2 True False 88161.67493400002 87508.50768336479 86952.29795956789 92815.2513466948 84740.35227530272 95465.38329878387 92631.3847850544 99162.5093953387 84515.87845875397 88620.43668879813 80192.32047826982 1.0993780253296164 1.0912330153493623 1.0842970678611286 1.1574082255400688 1.0567140565319508 1.190455429265857 1.155115405472713 1.2365586729992348 1.0539148631028297 1.105098794501303 1.0 16.29117646487811 -8.966193376327704 11.997177095366933 1.0237493158454642 1.1324897010991002 0.2741394047231942 0.05507709299194053 0.46564748528261735 164.08936385160285 0.008995087102468699 0.00945190171508467 1.0809525333108516e-09 8.966193376327704 0.10874038525363594 EVEDKES(ph)EGEEEDEDEDLSK ddPTM_A549_PD325901_60min_R1 10 EVEDKESEGEEEDEDEDLSK 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK 345.46 1.0907999999999994e-230 4462064400.0 209555.18000000002 213475.78999999998 215379.78 209933.34 247030.73 210278.9 215231.56 233789.44999999998 220814.40999999997 235487.47999999998 218841.94 True False 230829.0676072306 231466.14401665016 229996.7470546315 222900.44561859206 229680.14373455368 208566.45835614717 223422.31479502894 229126.33601547472 211534.34825049547 220618.7603242554 191925.7687333566 1.2026997163050186 1.2060191059504217 1.198363036774739 1.1613888384538331 1.1967134233738534 1.086703779969794 1.1641079583504528 1.193827892562989 1.1021675184450148 1.1495004645820233 1.0 17.550188901071632 -10.106771073052368 0.2317842238254405 0.9180245134605559 1.2206394541770855 0.1860138259023585 0.05539526741202192 1.2308053348139913 0.12622162975693008 0.1154618542419327 0.035009363347246435 7.820399277993234e-11 10.106771073052368 0.3026149407165296 EVEDKES(ph)EGEEEDEDEDLSKYK ddPTM_A549_MK2206_60min_R1 2 EVEDKESEGEEEDEDEDLSKYK 22 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EVEDKES(1)EGEEEDEDEDLSKYK;EVEDKES(1)EGEEEDEDEDLSKYK 222.36 6.883899999999998e-88 218932000.0 6257.290000000001 6401.0 6883.700000000001 6067.0 8434.1 5295.5 6222.4 5489.299999999999 9982.900000000001 8811.7 9551.4 True False 7313.367575947336 6726.783559118455 7859.9121694211535 7553.415272357976 7193.455062584715 5855.866295131591 7352.929535949797 6267.425085276204 7721.789089415506 6821.13085000857 7179.523774770505 1.01864243442541 0.9369400771060861 1.0947679004896669 1.0520774788574918 1.0019404194834156 0.8156343622274271 1.0241528221953462 0.8729583300915448 1.0755294266940894 0.9500812399255003 1.0 12.809672436431482 EVEDKES(ph)EGEEEDEDEDLSKYK ddPTM_A549_PD325901_60min_R1 4 EVEDKESEGEEEDEDEDLSKYK 22 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EVEDKES(1)EGEEEDEDEDLSKYK;EVEDKES(1)EGEEEDEDEDLSKYK;EVEDKES(1)EGEEEDEDEDLSKYK;EVEDKES(1)EGEEEDEDEDLSKYK 299.72 1.8814999999999993e-157 938909000.0 31291.6 30661.7 32484.799999999996 33049.6 36628.3 34224.3 37500.6 40195.299999999996 34580.0 36973.4 37719.2 True False 34468.300196341595 33245.66906624549 34689.41387497137 35090.99873091252 34055.65456877516 33945.58864783051 38927.70585411572 39393.573208897156 33126.72285518923 34638.8932140801 33079.97752170916 1.0419686704358047 1.0050088167208577 1.0486528853354267 1.060792701805302 1.029494489421152 1.0261672223190987 1.176775462697002 1.190858524104033 1.0014131005212865 1.047125657547617 1.0 15.013670633728234 -8.92534262668343 24.999999998346222 1.0006149019893755 1.0711975880232643 0.1421680948588493 0.058190727565025274 43.18745664663297 14460.766403852907 0.010514672407416225 0.011193693696103646 1.1875649555970274e-09 8.92534262668343 0.07058268603388873 EVEERS(ph)R ddPTM_A549_MK2206_60min_R1 4 EVEERSR 7 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5 Q04637-9;Q9UKE5-6 EIF4G1;TNIK Eukaryotic translation initiation factor 4 gamma 1;TRAF2 and NCK-interacting protein kinase 1 EVEERS(1)R;EVEERS(1)R;EVEERS(1)R;EVEERS(1)R 81.263 0.0050742 742483000.0 11057.5 9545.0 6855.21 5382.82 1454.1100000000001 1123.656 652.8499999999999 1056.6100000000001 935.8500000000001 16011.3 16529.3 True False 12923.735670080445 10030.799730008688 7827.381859020233 6701.611141643974 1240.2123452478693 1242.5605320975133 771.4643943727212 1206.3877032324142 723.88146924536 12394.336209669202 12424.618624527724 1.040171618995806 0.8073326057837025 0.6299897079792871 0.5393816377119351 0.09981894678034928 0.10000794146264949 0.062091595539983474 0.09709655802640546 0.05826186630922651 0.9975627087016787 1.0 13.600913948282939 -10.958611570809529 1.2568802623370139 0.9956693444332108 0.3421778393937672 0.34184837682694014 0.3255368544197232 0.45366915528369683 1.2877905333993873 0.24943029581902396 0.05959227479063778 1.0999892203521219e-11 10.958611570809529 -0.6534915050394435 EVEERS(ph)R ddPTM_A549_PD325901_60min_R1 4 EVEERSR 7 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5 Q04637-9;Q9UKE5-6 EIF4G1;TNIK Eukaryotic translation initiation factor 4 gamma 1;TRAF2 and NCK-interacting protein kinase 1 EVEERS(1)R;EVEERS(1)R;EVEERS(1)R;EVEERS(1)R 95.60799999999999 0.0034366999999999996 1240920000.0 9132.6 8696.3 7410.700000000001 6984.3 8196.8 5841.4 5154.6 5923.37 6922.0 8588.5 9532.4 True False 10059.734828935214 9429.167720667507 7913.634666159253 7415.704348503832 7621.0850454248775 5793.829575109998 5350.76112370535 5805.223738556127 6631.0924119034125 8046.220644277421 8359.975230862272 1.2033211284882748 1.1278942174204212 0.9466098221134345 0.8870486028627809 0.9116157446603842 0.6930438685656735 0.6400450929510059 0.6944068108150793 0.7931952223283636 0.9624694358630906 1.0 13.029282952522658 -5.762208872151421 1.4812057003504493 0.8497522641070998 1.229981145232321 0.5823107523328097 0.11096136917722388 0.3876974963667616 1.3560237939298971 0.019994443732917342 0.1643715041713707 1.728984611154517e-06 5.762208872151421 0.38022888112522124 EVEERS(ph)RER ddPTM_A549_MK2206_60min_R1 1 EVEERSRER 9 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EVEERS(1)RER 52.928000000000004 0.007526000000000001 5646900.0 432.13 607.49 514.03 401.41 127.06 206.64 0.0 0.0 83.855 831.56 825.35 True False 505.06297943584536 638.4086462004168 586.9271834111819 499.75546801997984 108.36964231536423 228.50650764346932 0.0 0.0 64.86197638891876 643.7100184564981 620.3928164988207 0.8141019141487842 1.029039391209054 0.9460573491541993 0.8055468321511905 0.17467907337636013 0.36832552145436337 0.0 0.0 0.10454985077836093 1.0375845776056334 1.0 9.277038171342914 -6.594543364837235 6.50993129412447 0.4404055100683026 0.929742246013277 0.34317332632135766 0.3398375901196552 0.2413081162426531 17.31006215926154 0.059364986011569226 0.12459378238298967 2.543645794293371e-07 6.594543364837235 0.48933673594497445 EVEERS(ph)RER ddPTM_A549_PD325901_60min_R1 2 EVEERSRER 9 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EVEERS(1)RER;EVEERS(1)RER 57.567 0.0043381999999999995 33652000.0 1423.68 1570.38 2081.37 1731.26 1905.0800000000002 1943.37 1809.62 1928.71 2002.63 1667.51 1902.04 True False 1568.210945542177 1702.7214338490892 2222.624284494567 1838.1959982232645 1771.2737529692108 1927.5438390422703 1878.4860793620592 1890.2403660062748 1918.4664254334205 1562.2231340209635 1668.1011380249763 0.9401174244140442 1.020754314612544 1.3324277730103005 1.1019691530213087 1.0618503354457214 1.155531757099856 1.1261224134084444 1.1331689205873394 1.1500899925677621 0.9365278270061179 1.0 10.703991047607518 -10.829831077047281 1.041530257805184 0.9990311924119151 1.119465178197112 0.24142076124115264 0.09453954041911095 0.7396154906804786 1.4056135216615777 0.06595880415938167 0.0157370040745717 1.4796838132883477e-11 10.829831077047281 0.12043398578519704 EVEERS(ph)RERPSQPEGLR ddPTM_A549_MK2206_60min_R1 4 EVEERSRERPSQPEGLR 17 3 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EVEERS(1)RERPSQPEGLR;EVEERS(0.982)RERPS(0.018)QPEGLR;EVEERS(1)RERPSQPEGLR;EVEERS(1)RERPSQPEGLR 140.8 6.641e-17 389076000.0 6131.61 7958.3 6714.93 6600.119999999999 4716.6 4648.83 5268.75 5016.5 5393.42 11406.800000000001 10931.7 True False 7166.475864528328 8363.343477352348 7667.208045645683 8217.149696290648 4022.79438804224 5140.766104956396 6226.013675195337 5727.604237386934 4171.818981521942 8829.995957633339 8217.057190428497 0.8721462804075502 1.0178027587655407 0.9330844203660531 1.0000112577848743 0.4895663124662349 0.6256213125721617 0.7576938471899168 0.6970383806088923 0.5077023178543063 1.0745934649108702 1.0 13.004406092568125 -6.7157412509567855 24.99980326097118 0.7293988066640276 0.9585732604140367 0.27382814861001603 0.1718920726741095 147.16260731543608 80506.60056952761 0.02775219629072053 0.05777064304030965 1.9242378323663905e-07 6.7157412509567855 0.2291744537500091 EVEERS(ph)RERPSQPEGLR ddPTM_A549_PD325901_60min_R1 4 EVEERSRERPSQPEGLR 17 3 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EVEERS(1)RERPSQPEGLR;EVEERS(0.958)RERPS(0.042)QPEGLR;EVEERS(0.995)RERPS(0.005)QPEGLR;EVEERS(0.967)RERPS(0.033)QPEGLR 158.91 9.242100000000001e-23 583412000.0 4732.54 5358.9800000000005 5706.13 5706.45 5789.09 6568.41 6254.26 6398.110000000001 5824.32 6779.82 6611.85 True False 5212.983976888192 5810.600051941947 6093.38229554716 6058.924456211741 5382.484289676301 6514.919046709395 6492.269286762391 6270.494676829808 5579.54408501839 6351.741008148677 5798.634365970451 0.8990020145917158 1.0020635351733362 1.0508305768176125 1.0448881708715443 0.9282330890293161 1.1235264435610035 1.1196203928398327 1.0813743859465412 0.9622169174456314 1.0953856731205813 1.0 12.501497456380983 -3.4906428545232533 16.551340404783822 1.006163763997856 0.488839411213563 0.0 0.07585947269954922 0.0 0.0 0.009642478628860704 0.0 0.00032311501911699457 3.4906428545232533 -0.517324352784293 EVEKQEDTENHPKT(ph)PESAPENK ddPTM_A549_MK2206_60min_R1 4 EVEKQEDTENHPKTPESAPENK 22 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 EVEKQEDTENHPKT(0.992)PES(0.008)APENK;EVEKQEDT(0.001)ENHPKT(0.98)PES(0.019)APENK;EVEKQEDTENHPKT(0.999)PES(0.001)APENK;EVEKQEDT(0.001)ENHPKT(0.999)PESAPENK 141.49 6.007899999999999e-27 50406400.0 5762.0 6534.5 6284.0 5468.5 7778.3 5903.0 5573.2 6132.1 7590.4 8561.0 8478.3 True False 6734.484732625231 6867.0781388938485 7175.165691799828 6808.282745490291 6634.122373851703 6527.6515419057305 6585.778299330709 7001.343953768643 5871.186519378085 6627.064154127278 6372.904120823835 1.0567371805610428 1.0775429864785304 1.125886339377766 1.0683171465335295 1.0409888879662135 1.0242820883772987 1.0334030097536373 1.0986112172771192 0.9212733171669163 1.0398813521253145 1.0 12.63773524049256 -8.758758318015234 24.999928878719864 0.9628235096814473 1.064924236920036 0.4034618018307029 0.03971909743562632 35.88381276735442 334603.11059471196 0.006804306560668557 0.007546373827810537 1.7427764470637753e-09 8.758758318015234 0.10210072723858876 EVELNELEPEKQPMNAASGAAMS(ph)LAGAEK ddPTM_A549_MK2206_60min_R1 3 EVELNELEPEKQPMNAASGAAMSLAGAEK 29 1 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2;F5H867 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 1 EVELNELEPEKQPMNAAS(0.026)GAAMS(0.974)LAGAEK;EVELNELEPEKQPMNAAS(0.223)GAAMS(0.777)LAGAEK;EVELNELEPEKQPMNAAS(0.425)GAAMS(0.575)LAGAEK 93.29 5.413600000000001e-10 10096900.0 2219.63 2335.4900000000002 2298.98 2308.52 3600.6 3302.1000000000004 2492.04 2985.97 3489.4 2814.39 3369.9 True False 2594.2492792566736 2454.3564653156636 2625.009933503178 2874.107503633402 3070.9565096859797 3651.526030243421 2944.811410511752 3409.240391649608 2699.0564714267866 2178.6173443212565 2533.06082549146 1.0241559354396246 0.9689291471472951 1.036299605239001 1.1346381716182328 1.212350086022967 1.4415469196382042 1.1625506110538837 1.3458975628775725 1.0655316462458497 0.8600730477518498 1.0 11.306666005052925 -4.030722937594385 16.130162795089532 1.095013027239786 1.101417094091085 0.0 0.16303563770880927 0.0 0.0 0.021415140065143022 0.0 9.31702074346587e-05 4.030722937594385 0.006404066851299017 EVELNELEPEKQPMNAASGAAMS(ph)LAGAEK ddPTM_A549_PD325901_60min_R1 2 EVELNELEPEKQPMNAASGAAMSLAGAEK 29 1 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2;F5H867 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 1 EVELNELEPEKQPMNAAS(0.009)GAAMS(0.991)LAGAEK;EVELNELEPEKQPMNAAS(0.138)GAAMS(0.862)LAGAEK 108.11 2.9743000000000002e-15 6610400.0 2374.5 1965.98 2326.6 2183.7599999999998 2851.8 2600.2 2372.1 2518.44 2392.8 2256.6 3169.6 True False 2615.557491985487 2131.66003420741 2484.4970669823515 2318.6458955211997 2651.499406175908 2579.0248332935635 2462.3715635629273 2468.2077385220414 2292.238937186144 2114.1178908862344 2779.75929374985 0.9409294890627536 0.7668505827106473 0.893781368972709 0.8341175082081961 0.9538593547066008 0.9277871069960526 0.885821865619605 0.8879213909174378 0.8246177797984627 0.760539912804581 1.0 11.440744246478399 -10.945147788510171 1.179759974335559 1.0006702338012938 0.8744122107701856 0.0 0.08763633099308799 0.36473166295741094 0.8943899121670231 0.037661964550467844 0.008609582091974152 1.1346246421728958e-11 10.945147788510171 -0.12625802303110822 EVELVS(ph)E ddPTM_A549_MK2206_60min_R1 3 EVELVSE 7 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 EVELVS(1)E;EVELVS(1)E;EVELVS(1)E 74.127 0.018726 273819800.0 1920.4 2480.7200000000003 1447.469 2226.49 1906.27 2015.7 1275.3000000000002 2055.7 1449.37 2635.79 1868.8 True False 2244.516570727786 2606.978051988178 1652.741869628232 2771.980149950935 1625.8602082205991 2229.00003608663 1507.0055022494168 2347.1017703172156 1121.0900091682925 2040.3632083643433 1404.7253837438614 1.5978329976110497 1.8558631332197355 1.1765586987709722 1.973325307586511 1.1574221033063212 1.5867870417105439 1.0728114688388128 1.6708616484609549 0.798084822942669 1.4524997070433694 1.0 10.4560724035534 -8.320511406126881 0.9037254240317175 0.9040863041294516 1.5759623079452976 0.11902387138259296 0.3377646140048667 0.3117101411022556 0.5024522021681342 0.05847164293699186 0.07582799979746235 4.780668102394091e-09 8.320511406126881 0.671876003815846 EVELVS(ph)E ddPTM_A549_PD325901_60min_R1 2 EVELVSE 7 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 EVELVS(1)E;EVELVS(1)E 98.523 0.011504 23945100.0 124.15 182.54 164.4 232.85 254.98 86.007 148.45 280.69 112.56 135.74 232.53 True False 136.75361660560054 197.92328642418573 175.55717261751005 247.232615659281 237.07108443324654 85.30658750753 154.09934598495693 275.0914177529547 107.829494637944 127.16935323446668 203.93028412911798 0.6705900361469379 0.9705438663483207 0.8608685726459168 1.212338896672876 1.162510440495172 0.4183125025879841 0.7556471891511184 1.3489483375543243 0.5287566537673826 0.6235922917360803 1.0 7.671932224661577 EVEPEPTEDKDLEADEEDTR ddPTM_A549_PD325901_60min_R1 2 EVEPEPTEDKDLEADEEDTR 20 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ; 100.21 1.0190999999999998e-08 4032100.0 1780.9699999999998 1977.26 2226.8999999999996 1524.37 1925.3200000000002 1938.2199999999998 1767.29 1836.45 1794.37 1835.88 1992.9699999999998 False True 1961.7727633191798 2143.8906393945736 2378.030825437549 1618.5268728045453 1790.09216519342 1922.4357789347919 1834.5451880481946 1799.820564082846 1718.9588689897605 1719.9622234867586 1747.847324477737 1.1223936643924919 1.2265891931008195 1.3605483683468254 0.9260115858735928 1.0241696400618434 1.0998877030116017 1.0496026525636977 1.0297355717958026 0.983471980027427 0.9840460315952879 1.0 10.771363454718756 -6.268442125339058 24.998074239537832 1.0052520110314036 1.2355182889835674 0.6968817748723684 0.06579607909389891 206.46353722625625 737024.5075824839 0.009103896026995592 0.02158830849556052 5.389616633368114e-07 6.268442125339058 0.2302662779521638 EVESRLS(ph)PGESAYQK ddPTM_A549_MK2206_60min_R1 1 EVESRLSPGESAYQK 15 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 EVES(0.047)RLS(0.953)PGESAYQK 62.966 0.0012979 19933000.0 2477.4 3109.7 2849.7 2402.4 3892.8 2892.2 2397.5 2190.3 3928.5 3691.4 4950.3 True False 2895.5245533852403 3267.9704473973834 3253.8303106177577 2990.988107847834 3320.1742767609794 3198.250684313018 2833.094716257333 2500.781732512429 3038.701022525401 2857.510176211357 3721.0038886704006 0.7781568200456456 0.878249672715366 0.8744495861788593 0.8038121424583037 0.892279174141727 0.8595128572832065 0.7613791334331721 0.6720717868978136 0.8166347344536633 0.767940658409903 1.0 11.861476182828694 -10.490871372727172 0.9516036613585622 0.9936517951712489 0.8183518551220602 0.0 0.09020721055734403 0.3345587659043327 0.5700690164793392 0.03651840634350976 0.012128445447277243 3.229450463352458e-11 10.490871372727172 -0.1752999400491887 EVFEDAAEIR ddPTM_A549_MK2206_60min_R1 2 EVFEDAAEIR 10 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 144.77 1.1699999999999999e-07 18340800.0 2070.04 2365.6000000000004 2278.5 2328.2 3348.2000000000003 2632.2 2350.52 2642.8 3536.3 3033.2 3767.5 False True 2419.4121443810363 2485.9989357054565 2601.625561547728 2898.6091045168696 2855.684215333722 2910.7376568870504 2777.5790583763037 3017.4249932355583 2735.3336963106954 2347.9980133511112 2831.9257722897064 0.8543345902830147 0.8778474916365634 0.9186771726167904 1.0235469915488806 1.0083895006276262 1.0278297847240614 0.9808092731648607 1.0655028541923504 0.9658917345489203 0.8291170751458915 1.0 11.467567736045932 -6.013894614493919 2.9232276282277025 0.9961208081627076 0.8660800314154012 0.40415374329119935 0.057447376453688435 0.09418354141911528 1.6143892507712714 0.004220762963371321 0.014468060271760666 9.685128461999368e-07 6.013894614493919 -0.1300407767473064 EVFEDAAEIR ddPTM_A549_PD325901_60min_R1 2 EVFEDAAEIR 10 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 142.43 1.3404999999999999e-07 22368000.0 5073.3 5286.7 5596.0 5264.2 6343.5 4850.0 4870.4 5666.799999999999 5373.799999999999 5725.4 6067.5 False True 5588.337681233934 5732.22876267526 5975.77821148167 5589.357678134367 5897.95444388697 4810.503208012375 5055.745737185145 5553.771228481396 5147.957873892888 5363.897266897124 5321.235965051495 1.050195427892447 1.077236341391936 1.1230056796445487 1.0503871121002388 1.1083805496736496 0.9040199005656803 0.9501074130878575 1.043699483532986 0.9674364955253528 1.0080171791151185 1.0 12.377545664514772 -7.242089973559548 24.999246964583318 0.9812738358592574 1.0821246967014058 0.6363073490057181 0.03873582415573347 407.6129384242012 526631.9734524217 0.005510720822014512 0.009536615119968651 5.726773761056395e-08 7.242089973559548 0.10085086084214834 EVGDVIALSDITSS(ph)GAADRSQEPS(ph)PVGSR ddPTM_A549_MK2206_60min_R1 1 EVGDVIALSDITSSGAADRSQEPSPVGSR 29 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 2 EVGDVIALS(0.068)DIT(0.272)S(0.286)S(0.301)GAADRS(0.327)QEPS(0.653)PVGS(0.092)R 49.464 0.0028884 8320400.0 1152.3 1253.8 1341.5 1194.2 1475.8 1663.0 1436.4 1243.8 2000.1 1577.8 1886.3 True False 1346.7800689698115 1317.613064587208 1531.7448719843217 1486.779053609676 1258.7117749804386 1838.9775561899414 1697.3752869372402 1420.112458977747 1547.0805435033863 1221.3738841703098 1417.879650768432 0.9498549952669908 0.9292841348510196 1.0803066897491473 1.0485932658698527 0.8877423230513739 1.2969912892065922 1.1971222564745416 1.0015747515722544 1.0911226087947117 0.8614087123038798 1.0 10.469519366881219 -5.758587269419554 24.976390270010075 1.0601537116851427 0.9395695210866675 0.11523353238134248 0.11787439101205703 94.13042598831046 824267.1845527459 0.014063885039158517 0.05004030426467453 1.7434629816337776e-06 5.758587269419554 -0.12058419059847525 EVGDVIALSDITSSGAADRS(ph)QEPS(ph)PVGSR ddPTM_A549_MK2206_60min_R1 1 EVGDVIALSDITSSGAADRSQEPSPVGSR 29 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 2 EVGDVIALS(0.01)DIT(0.041)S(0.044)S(0.047)GAADRS(0.871)QEPS(0.92)PVGS(0.066)R 62.183 0.00025689 4646200.0 659.73 918.15 799.47 671.26 1056.3 1027.8 794.01 939.48 947.87 930.89 796.85 True False 771.0762951500947 964.8799132642721 912.846867540295 835.718730134006 900.9196692721486 1136.561113801576 938.2713391680854 1072.654167036834 733.1789584373555 720.6013024688169 598.9701530588056 1.2873367582881747 1.6108981529995239 1.52402730399602 1.3952593895808978 1.504114461582693 1.897525457649959 1.5664742798560916 1.7908307476742051 1.2240659316548175 1.2030671291196537 1.0 9.226340304463445 -8.946052955602251 4.25962996838479 1.09391709415148 1.5739647463636925 0.5749980155376863 0.1653953158539371 0.10000307707802703 3.5139750288114056 0.030609018290348688 0.031798166212371116 1.1322622926639886e-09 8.946052955602251 0.48004765221221257 EVGDVIALSDITSSGAADRS(ph)QEPS(ph)PVGSR ddPTM_A549_PD325901_60min_R1 2 EVGDVIALSDITSSGAADRSQEPSPVGSR 29 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 2 EVGDVIALS(0.135)DIT(0.163)S(0.163)S(0.18)GAADRS(0.359)QEPS(0.977)PVGS(0.023)R;EVGDVIALS(0.001)DIT(0.017)S(0.018)S(0.02)GAADRS(0.944)QEPS(0.933)PVGS(0.066)R 92.846 6.011900000000001e-10 69044000.0 1743.75 1680.34 2765.7 1948.83 2257.75 1704.36 2122.9 2346.8999999999996 1627.63 1865.17 2022.7400000000002 True False 1920.7742163190971 1821.9481489537434 2953.397033505155 2069.2048029859416 2099.1734288146613 1690.4802572387562 2203.6881211954533 2300.089238392566 1559.226371335793 1747.4028478880955 1773.9558032053164 1.0827632869141939 1.0270538565062957 1.6648650593034706 1.1664353752484402 1.1833290463165527 0.9529438412074696 1.2422452223520248 1.2965876794881768 0.878954463531992 0.985031783052744 1.0 10.792754351070622 -8.765445854710384 24.999812084243604 0.9428395980662689 1.2028514213098311 0.27987968970515364 0.17643202225357224 90.54332364815457 564975.1329061604 0.030507459559024997 0.03306082593747587 1.7161456557621012e-09 8.765445854710384 0.2600118232435622 EVGEHLVSIK ddPTM_A549_PD325901_60min_R1 1 EVGEHLVSIK 10 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 60.434 0.008611200000000001 1542700.0 571.08 577.7 500.04 585.91 826.35 721.15 507.09 528.42 617.74 605.02 629.6 False True 629.0556211931244 626.3848064383267 533.9757213847915 622.1003300018435 768.3100267527391 715.2771934965206 526.3875874402954 517.8802485625296 591.7785360487162 566.818933946641 552.1631913632333 1.1392567107562017 1.134419708224027 0.9670614226682898 1.1266602695227523 1.3914546256802482 1.295409046971378 0.9533188660053551 0.9379115751702631 1.071745718123073 1.0265424113969355 1.0 9.108950907096398 -7.775005827775518 24.995104676785513 1.0205233149948865 1.171926441698391 0.4019483110467258 0.10632528188371826 229.1799595142662 422244.937708894 0.018167717414601787 0.025176637751430135 1.678781490488155e-08 7.775005827775518 0.15140312670350453 EVGGGHGCT(ph)SPPFPQEAR ddPTM_A549_MK2206_60min_R1 2 EVGGGHGCTSPPFPQEAR 18 0 A0A1B0GVD3;Q6ZN17-2;Q6ZN17 A0A1B0GVD3 LIN28B Protein lin-28 homolog B 1 EVGGGHGCT(0.57)S(0.43)PPFPQEAR;EVGGGHGCT(0.5)S(0.5)PPFPQEAR 81.665 0.00020044 8088700.0 1396.65 1972.87 1524.08 1803.17 2250.3 1652.58 1209.46 1329.55 2845.3 2501.3999999999996 2669.3 True False 1632.3703751858793 2073.2806561909106 1740.2174614192045 2244.9467309473775 1919.2838509543853 1827.454918706177 1429.2032264961815 1518.0177840761073 2200.844093010442 1936.3320027022514 2006.4391410677922 0.813565854938994 1.0333135023908806 0.8673163445630805 1.1188710811097193 0.9565622059849648 0.9107950903178839 0.7123082864778965 0.7565730517339512 1.0968905300756797 0.9650589260692797 1.0 10.970421681890757 -8.789873580311085 24.998055727687547 1.0457538706084903 0.9035693392174419 0.1785150188897089 0.11476164538886474 228.10172981895883 200535.6270005055 0.02064557814783711 0.021980864167599763 1.6222822621700178e-09 8.789873580311085 -0.14218453139104847 EVGLLKDMS(ph)PLSETEMALGK ddPTM_A549_MK2206_60min_R1 1 EVGLLKDMSPLSETEMALGK 20 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EVGLLKDMS(0.974)PLS(0.013)ET(0.013)EMALGK 46.131 0.0048854 1812400.0 726.39 772.63 688.24 868.94 886.36 628.61 812.63 564.41 1059.7 1008.0 1042.8 True False 848.9868734695667 811.9535668304471 785.8427809873191 1081.8303390081987 755.977618153992 695.1290929624525 960.2743521469015 644.4168459331319 819.6796419931694 780.2920999135957 783.8439801841289 1.0831069637992696 1.0358612011534682 1.0025499982824653 1.3801602951062677 0.964449096077014 0.8868207328697775 1.225083532466918 0.8221238693212329 1.045717850382193 0.9954686387083067 1.0 9.61442271220894 EVGLLKDMSPLS(ph)ETEMALGK ddPTM_A549_PD325901_60min_R1 1 EVGLLKDMSPLSETEMALGK 20 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EVGLLKDMS(0.011)PLS(0.782)ET(0.206)EMALGK 83.25299999999999 2.4579e-05 6241500.0 1722.7 1841.7 2033.4 2205.2 3091.6 2496.9 2362.4 2663.0 2221.3 2364.2 2403.5 True False 1897.5872358152892 1996.906522446711 2171.3987518275244 2341.410195627429 2874.456681440996 2476.566074244558 2452.302424754882 2609.8843759169135 2127.9464857788275 2214.924008523104 2107.884737041823 0.9002329218808888 0.9473509093524453 1.0301316356011174 1.1107866357594736 1.3636688149632743 1.1749058336653349 1.1633949341065062 1.2381532680859912 1.0095174790084391 1.0507804196312454 1.0 11.04158026461417 -3.9073879334036774 14.19530946870323 1.0586114927575023 1.0797311609225775 0.0 0.1337236139297055 0.0 0.0 0.01929763525767951 0.0 0.00012376905259529704 3.9073879334036774 0.021119668165075156 EVGLLKDMSPLSET(ph)EMALGK ddPTM_A549_PD325901_60min_R1 2 EVGLLKDMSPLSETEMALGK 20 1 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 EVGLLKDMS(0.073)PLS(0.403)ET(0.524)EMALGK;EVGLLKDMS(0.039)PLS(0.312)ET(0.65)EMALGK 75.548 8.898100000000001e-05 9506200.0 4103.1 3617.5 4328.0 4204.6 4801.4 4642.9 4149.3 4485.1 3774.7 4284.5 4761.5 True False 4519.643691457426 3922.3594206173534 4621.724106378247 4464.30859266057 4464.166227930777 4605.089761748586 4307.20388208408 4395.641162007116 3616.0624858728424 4013.9759388026578 4175.865685635383 1.0823249672528046 0.939292524208796 1.106770297300648 1.0690737990011043 1.0690397067336534 1.102786849105252 1.0314517291349885 1.0526299198577536 0.8659431979126592 0.96123205126314 1.0 12.02785959384382 -8.733771356152285 22.803178553031763 0.936695439488783 1.0559509370240785 0.48915872865468524 0.05191876956196811 54.45802113255893 44882.407574013734 0.010404988079713505 0.011795905249440176 1.8459870237198737e-09 8.733771356152285 0.11925549753529552 EVGS(ph)PPLDPTER ddPTM_A549_MK2206_60min_R1 2 EVGSPPLDPTER 12 0 A0A1B0GV79;A0A1B0GW21;A0A1B0GTE6;A0A0D9SFK7;A0A1B0GUH6;A0A1B0GUA3;Q96EK5 A0A1B0GV79 KIF1BP;KIAA1279 KIF1-binding protein 1 EVGS(0.999)PPLDPT(0.001)ER;EVGS(0.945)PPLDPT(0.055)ER 58.273999999999994 0.012466 4974800.0 653.03 643.47 396.42999999999995 637.25 705.23 526.24 543.27 627.54 826.11 878.8399999999999 813.9100000000001 True False 763.2454989493675 676.2198745174113 452.6497350732345 793.3762786072392 601.491601212532 581.9263675101593 641.9751267992167 716.4957167606485 638.9974040265895 680.3094336191118 611.7936842267591 1.24755374013713 1.10530705358961 0.7398731741491166 1.2968036432248902 0.9831608542555522 0.9511807370905621 1.0493327135447692 1.1711394465704912 1.044465512641264 1.1119915931772804 1.0 9.256901403271419 -2.350790904231894 0.009242619946252313 0.12892502081770638 2.0863311042138295 0.0 0.14631661457577114 36765.42911118822 26.97596732018418 2498.8380554883656 3261.9074338952846 0.004458708660716321 2.350790904231894 1.957406083396123 EVGS(ph)PPLDPTER ddPTM_A549_PD325901_60min_R1 2 EVGSPPLDPTER 12 0 A0A1B0GV79;A0A1B0GW21;A0A1B0GTE6;A0A0D9SFK7;A0A1B0GUH6;A0A1B0GUA3;Q96EK5 A0A1B0GV79 KIF1BP;KIAA1279 KIF1-binding protein 1 EVGS(0.95)PPLDPT(0.05)ER;EVGS(0.978)PPLDPT(0.022)ER 55.452 0.018447 4201900.0 808.83 785.24 721.71 716.11 797.9300000000001 675.06 598.38 802.8599999999999 869.1400000000001 935.62 1229.4 True False 890.9418261708245 851.4149306000195 770.6895805947879 760.3424882961901 741.886149509061 669.5625351754294 621.1516783461 786.8463274685139 832.6130683157663 876.5447935260922 1078.1915938087027 0.8263297833955281 0.7896694200632779 0.7147983577504379 0.7052016475200726 0.6880837819263221 0.6210051525352793 0.576105102203484 0.7297834002665388 0.7722310887015615 0.8129768387728801 1.0 10.074397851321315 -10.024541727160656 0.7336309093609522 0.9879852179523632 0.7041093519441514 0.3981268903900512 0.0839194900269558 0.27335292519704785 0.29453386552691757 0.03847955307445939 0.016054945124904057 9.450575866260256e-11 10.024541727160656 -0.2838758660082118 EVGSIIGK ddPTM_A549_MK2206_60min_R1 2 EVGSIIGK 8 0 F8VZX2;H3BRU6;F8W0G4;P57721;P57721-4;E9PFP8;P57721-5;P57721-3;P57721-2;J3QT27;H3BSP4;C9J0A4;C9K0A2;C9JZY3;F8W1G6;C9J5V4;C9JTY5;C9JSA6;C9J7A9;C9IZV9;F8VTZ0;F8WC71;P57723-2;P57723;Q15365;Q15366-6;Q15366-3;Q15366;Q15366-2;Q15366-4;Q15366-5;Q15366-7;Q15366-8 F8VZX2;Q15365;Q15366-6;Q15366-4 PCBP2;PCBP3;PCBP4;PCBP1 Poly(rC)-binding protein 3;Poly(rC)-binding protein 4;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 0 ; 105.14 0.0055608 7818400.0 6008.0 7144.5 7811.8 7059.200000000001 10195.900000000001 7459.8 6724.4 6606.9 11396.3 9813.400000000001 8724.6 False True 7022.0035185026745 7508.124533373192 8919.63070515626 8788.704316899533 8696.096616427065 8249.191084585522 7946.136437956542 7543.448307782658 8815.056246151507 7596.5461242977035 6558.041033289649 1.0707471153135333 1.1448730642673277 1.3601059615026514 1.340141708825347 1.326020464386287 1.2578742710988433 1.2116631167174317 1.1502593944580288 1.3441599711567667 1.1583559916347639 1.0 12.679049213282095 -10.921749982342822 1.0906024218885095 0.9950968351872779 1.2554033899000316 0.23594018576919695 0.10102177840510128 0.3648184721309621 0.746371559517934 0.07459267697767194 0.016294555341684197 1.1974296775374061e-11 10.921749982342822 0.26030655471275377 EVGSIIGK ddPTM_A549_PD325901_60min_R1 3 EVGSIIGK 8 0 F8VZX2;H3BRU6;F8W0G4;P57721;P57721-4;E9PFP8;P57721-5;P57721-3;P57721-2;J3QT27;H3BSP4;C9J0A4;C9K0A2;C9JZY3;F8W1G6;C9J5V4;C9JTY5;C9JSA6;C9J7A9;C9IZV9;F8VTZ0;F8WC71;P57723-2;P57723;Q15365;Q15366-6;Q15366-3;Q15366;Q15366-2;Q15366-4;Q15366-5;Q15366-7;Q15366-8 F8VZX2;Q15365;Q15366-6;Q15366-4 PCBP2;PCBP3;PCBP4;PCBP1 Poly(rC)-binding protein 3;Poly(rC)-binding protein 4;Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 0 ;; 130.27 0.0029635 14537100.0 9841.9 10336.900000000001 9810.400000000001 10540.2 12804.7 12089.3 10900.9 11271.8 11604.9 11236.1 11395.7 False True 10841.042442776157 11208.026840353703 10476.192738727625 11191.244215468989 11905.342045816897 11990.848748994633 11315.739714701363 11046.975106443968 11117.186410126826 10526.650728435176 9994.101143294163 1.0847441192898346 1.1214642197086486 1.0482376142207581 1.1197849666528625 1.1912368981581838 1.1997926153709426 1.1322418647217707 1.1053495404993237 1.1123748149763553 1.053286391392821 1.0 13.286861103315289 -10.34471113697181 0.6670066873506183 0.9967884021629081 1.1273791149277992 0.41946787044047884 0.04299300716581841 0.4858060779209113 0.38485507545803016 0.03359409754989527 0.00943748068510845 4.521565880612864e-11 10.34471113697181 0.1305907127648911 EVGSTETSQDGDAS(ph)SSEGEMR ddPTM_A549_PD325901_60min_R1 1 EVGSTETSQDGDASSSEGEMR 21 0 Q9BUL5-4;Q9BUL5;I3L1N0;Q9BUL5-3;I3L410 Q9BUL5-4 PHF23 PHD finger protein 23 1 EVGST(0.001)ET(0.01)S(0.01)QDGDAS(0.326)S(0.326)S(0.326)EGEMR 40.844 0.030951999999999997 1372600.0 239.09 218.3 0.0 153.1 0.0 0.0 270.7 232.96 184.95 219.53 150.31 True False 263.3622407912447 236.6969071239167 0.0 162.55663928467226 0.0 0.0 281.00163663272394 228.3134300464155 177.17719468095004 205.6688383347758 131.82282289359537 1.9978501067590184 1.7955684905562483 0.0 1.2331448812614534 0.0 0.0 2.131661501889871 1.731971938051314 1.3440555344802756 1.5601914283142564 1.0 7.04245636000622 -7.7596228098801125 24.99990649381475 1.2844515864358446 0.823109409149337 0.15574933087364462 0.7138173525835978 100.96037903510151 1389416.6715700051 0.11345616586583042 0.16353385811626317 1.7393107858395266e-08 7.7596228098801125 -0.4613421772865076 EVGVYEALKDDSWLK ddPTM_A549_PD325901_60min_R1 1 EVGVYEALKDDSWLK 15 1 A0A5K1VW95;P40925;P40925-3;B8ZZ51;B9A041;P40925-2 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic 0 97.76700000000001 1.3944e-05 1298500.0 2945.7 2250.3 2330.4 3051.6 2854.5 2577.0 2627.8 2086.5 3577.5 2939.4 3418.7 False True 3244.745295490273 2439.940678428538 2488.554957833609 3240.0904013135573 2654.009767490401 2556.0137664016256 2727.802366987335 2044.8831206724149 3427.1501160913704 2753.8057823588592 2998.221572924852 1.082223316912809 0.8137959850806841 0.8300103569083294 1.080670765153876 0.885194673888407 0.8525099644013835 0.9098067973429612 0.6820320216285991 1.1430609889008592 0.9184797438677763 1.0 11.549891289144604 -8.797132004205984 24.999979592167428 1.0675565848913682 0.8926903568615727 0.15491486702466306 0.12069570412307463 145.66739180233344 102028.33301765569 0.019574238325162797 0.020838711480068862 1.5953941520177538e-09 8.797132004205984 -0.17486622802979546 EVIEIEDAS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 EVIEIEDASPTK 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.99)PT(0.01)K 175.74 5.7641e-16 6021100.0 4368.4 5132.9 4477.6 4064.5 6456.8 5656.3 5092.6 5550.9 6657.3 4895.5 6118.9 True False 5105.679122874014 5394.142685611484 5112.591009166604 5060.302682462341 5507.013273271238 6254.845911651936 6017.859500317871 6337.757073918291 5149.432179523572 3789.6031499275905 4599.408256951157 1.110073043669851 1.1727905818013074 1.1115758209634612 1.1002073309788554 1.197330822926711 1.3599240515774809 1.3083986382863462 1.377950536210814 1.1195858014432956 0.8239327622635596 1.0 12.167232545901964 -9.321773556745878 1.8357223262965008 1.0369315065204645 1.2143135130566414 0.43823600307050947 0.11502691773383823 0.2519490187610092 1.7449562684093989 0.02288770263185265 0.020134904238073226 4.766794650112767e-10 9.321773556745878 0.17738200653617686 EVIEIEDAS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 EVIEIEDASPTK 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.995)PT(0.005)K;EVIEIEDAS(0.808)PT(0.192)K 202.29 9.316000000000001e-25 10172000.0 4801.8 5200.8 4997.4 4980.9 5970.9 5566.6 5747.8 4741.2 6315.2 5370.4 6084.1 True False 5289.275201101671 5639.089668209191 5336.5536158074465 5288.558880555352 5551.524582486751 5521.267455200346 5966.535674316849 4646.633046600554 6049.794105699568 5031.312027481804 5335.794270287564 0.9912816973763521 1.056841658909252 1.0001423116187427 0.9911474492194642 1.0404307777382804 1.0347601829301387 1.118209468371293 0.8708418674376909 1.1338132242818881 0.9429359103102468 1.0 12.381487326942135 -6.939120698252604 5.593056593605188 1.0509560590483158 1.0125091883147836 0.0 0.07470624117171733 0.5187375070854717 32.452606174803904 0.010558822728186704 0.020115915053004283 1.1504806052440483e-07 6.939120698252604 -0.038446870733532146 EVIEIEDAS(ph)PTKCPITTK ddPTM_A549_MK2206_60min_R1 1 EVIEIEDASPTKCPITTK 18 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.5)PT(0.5)KCPITTK 204.83 1.1907000000000002e-49 46437000.0 6053.6 6742.4 7528.8 5689.3 8123.9 6882.7 6971.7 5906.7 8350.2 7810.2 8305.6 True False 7075.299683689709 7085.559360881152 8596.497049717149 7083.178755402384 6928.885071665251 7611.022745633504 8238.367646853492 6743.992813510093 6458.893032529364 6045.870395580525 6243.090297101357 1.1333008729626648 1.134944238139716 1.3769618315000938 1.1345629196955676 1.1098486073286986 1.2191114309474707 1.3195977079938337 1.08023310453179 1.034566652916778 0.9684098912340896 1.0 12.608044617065211 -8.482416135409022 5.599111848584294 1.0179793528422536 1.2027484921203258 0.5597318395201802 0.0798570892532282 0.11282294003239582 9.190674374160253 0.012955345450245544 0.015479563630978231 3.2929403563648245e-09 8.482416135409022 0.18476913927807215 EVIEIEDAS(ph)PTKCPITTK ddPTM_A549_PD325901_60min_R1 1 EVIEIEDASPTKCPITTK 18 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.988)PT(0.012)KCPITTK 216.65 2.5407e-56 103290000.0 17787.0 15645.0 18166.0 17675.0 17832.0 16421.0 17989.0 19136.0 15051.0 17572.0 18860.0 True False 19592.72314590266 16963.45905613227 19398.854001032163 18766.74460716251 16579.54183706038 16287.272820365191 18673.581238958508 18754.31746809841 14418.458811262386 16462.50092114372 16540.33956339039 1.1845417726047338 1.025581064470913 1.1728207831941175 1.1346045548363433 1.0023701008990624 0.984700027344945 1.1289720605428037 1.1338532317443066 0.8717148010174789 0.9952940118340162 1.0 14.013701232038734 -8.755551181020639 24.9999248246403 0.9394208766220471 1.0917126522182872 0.43122289532746183 0.07095616294356534 93.79635518700663 398237.18201846874 0.013071866875273033 0.014632098877683086 1.7556939758329204e-09 8.755551181020639 0.15229177559624008 EVIEIEDASPT(ph)K ddPTM_A549_MK2206_60min_R1 1 EVIEIEDASPTK 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.316)PT(0.684)K 148.96 4.7842e-12 5924100.0 2479.3 3037.0 2807.0 2267.3 3511.7 3483.6 3142.9 3336.8 4210.4 4094.0 3910.8 True False 2897.7452269347 3191.5703279241893 3205.07480854267 2822.7886017829637 2995.1335819208603 3852.2322397734692 3713.924247643452 3809.8016185214215 3256.751122627195 3169.162556593514 2939.6404274109045 0.9857481887629693 1.0857009238831201 1.0902948464909865 0.9602496194642219 1.0188775314125176 1.3104433466940486 1.2633940576584395 1.296009397270711 1.1078739740613741 1.0780783006800467 1.0 11.521423982133104 -5.254878071346812 3.966266758105911 1.0933879403954088 0.9751649792060482 0.05697951476088903 0.11658987846996742 0.6839728176815772 21.788060967569447 0.01807905945318929 0.23384486792956535 5.560603499122696e-06 5.254878071346812 -0.1182229611893606 EVIEIEDASPT(ph)KCPITTK ddPTM_A549_MK2206_60min_R1 1 EVIEIEDASPTKCPITTK 18 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.37)PT(0.63)KCPITTK 213.37 6.206299999999999e-56 41055000.0 8480.0 8969.8 9905.2 7908.9 12494.0 9617.8 10438.0 10391.0 13220.0 12386.0 11454.0 True False 9911.216683905242 9426.324506886538 11309.906303376149 9846.580855044016 10656.149150701725 10635.549212221063 12334.449488339547 11863.956071102877 10225.691108001984 9587.9939975494 8609.655685681824 1.151174570243031 1.0948549920019293 1.3136305000192912 1.1436672051147463 1.2376974805651397 1.2353048252450298 1.4326298215214568 1.3779826399832777 1.1877003542670919 1.1136326872507327 1.0 13.071739827685839 -9.980735048536667 0.9867252261532994 1.0233438270952764 1.243485246593897 0.3202475775289694 0.10094264282940223 0.3370923967779912 0.6648885747513157 0.03808925336923823 0.02026340717206368 1.0453577695783471e-10 9.980735048536667 0.22014141949862065 EVIKS(ph)PTASR ddPTM_A549_MK2206_60min_R1 2 EVIKSPTASR 10 1 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 EVIKS(0.629)PT(0.371)ASR;EVIKS(0.5)PT(0.5)ASR 89.23100000000001 0.00019162 45364000.0 6133.700000000001 5917.5 5264.5 5325.7 7822.799999999999 5594.8 5773.4 5502.700000000001 8568.0 8309.2 8552.0 True False 7168.918605432727 6218.67547431393 6011.085261693221 6630.496739079755 6672.076482800498 6186.838022472334 6822.3520478999335 6282.7245763119845 6627.361680284496 6432.145949009971 6428.30237680731 1.1152117907983745 0.967390005913584 0.9350968435120028 1.0314537727724107 1.0379220036183583 0.96243730612204 1.061299181027065 0.977353616559707 1.0309660765485105 1.000597914033498 1.0 12.650222077281235 EVIKS(ph)PTASR ddPTM_A549_PD325901_60min_R1 3 EVIKSPTASR 10 1 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 EVIKS(0.98)PT(0.019)AS(0.001)R;EVIKS(0.639)PT(0.36)AS(0.001)R;EVIKS(0.499)PT(0.499)AS(0.002)R 74.46 0.00047118 53375300.0 7820.599999999999 7374.3 7779.0 7891.6 8365.3 8029.1 7709.299999999999 7860.8 7949.5 8640.8 9601.4 True False 8614.541554778567 7995.758141108098 8306.929718927076 8379.046208876023 7777.750186718321 7963.713671639616 8002.681630190834 7704.010177321695 7615.4101601309085 8095.218413351844 8420.48866828931 1.0230453236306867 0.9495598718895374 0.9865139715952728 0.9950783783405166 0.923669693423913 0.9457543362809974 0.9503820912826717 0.9149124808319261 0.904390524128339 0.9613715702554888 1.0 13.039688244659285 -6.7469414974762465 24.9576673985992 0.9479660404134498 0.9856190401765421 0.35426383191082633 0.02903120423583289 331.4613432553424 570597.7371281395 0.005583695638785441 0.01158111645374867 1.790847077494966e-07 6.7469414974762465 0.03765299976309233 EVIKSPT(ph)ASR ddPTM_A549_PD325901_60min_R1 1 EVIKSPTASR 10 1 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 EVIKS(0.396)PT(0.602)AS(0.002)R 64.104 0.0024611999999999998 36533000.0 4106.2 5053.8 4446.3 5312.3 4966.8 4221.7 4312.9 4722.6 4918.7 4653.9 5962.6 True False 4523.058401175327 5479.701462312644 4748.052655773933 5640.42870589134 4617.949102529806 4187.319874900172 4477.029769609436 4628.404038191969 4711.984144240002 4360.05195976046 5229.238000035603 0.86495554441097 1.047896741795905 0.9079817471955963 1.0786330065399465 0.8831017258151884 0.8007514431111498 0.8561533763770083 0.8851010487876928 0.9010842773283451 0.8337834230782333 1.0 12.352385018196854 -4.957412362919368 15.6140811694694 0.938226656232998 0.526202433787717 0.0 0.08541697851635165 5758018.001552557 59384956.18831635 0.01139857010403846 68155335.70088635 1.1030307940018728e-05 4.957412362919368 -0.4120242224452809 EVKAEEKS(ph)PISINVK ddPTM_A549_MK2206_60min_R1 3 EVKAEEKSPISINVK 15 2 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 EVKAEEKS(0.999)PIS(0.001)INVK;EVKAEEKS(0.988)PIS(0.012)INVK;EVKAEEKS(0.985)PIS(0.015)INVK 102.33 1.3665e-06 125634600.0 9879.5 10974.8 11446.2 10154.1 13735.599999999999 9716.8 9909.0 8802.3 15143.0 15099.5 16953.8 True False 11546.918069415307 11533.370442839116 13069.443275219479 12641.854955834868 11715.111435439296 10745.025326510173 11709.337035826455 10050.052980913179 11713.134678401968 11688.512462941813 12743.703558923735 0.906088094094877 0.9050250101559301 1.0255608359681 0.9920079274743057 0.9192862484027124 0.843163471029268 0.9188331305483822 0.788628904811244 0.919131132032641 0.9171990237294065 1.0 13.637496992278226 -10.353461126050775 1.0653844542927404 0.9936107474164024 0.9149351583535444 0.019046958879568088 0.06425561119791867 0.5874081774245863 1.307347944565423 0.027862601061879145 0.011606047711442148 4.4313787824083514e-11 10.353461126050775 -0.07867558906285799 EVKAEEKS(ph)PISINVK ddPTM_A549_PD325901_60min_R1 3 EVKAEEKSPISINVK 15 2 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 EVKAEEKS(0.996)PIS(0.004)INVK;EVKAEEKS(0.981)PIS(0.019)INVK;EVKAEEKS(0.997)PIS(0.003)INVK 102.37 1.3625999999999999e-06 197958000.0 6158.0 5432.9 6561.1 6010.6 6645.700000000001 6888.4 7308.5 7027.4 7004.4 6150.799999999999 5748.5 True False 6783.155626720001 5890.7495497642085 7006.375701099425 6381.861110936975 6178.928958420373 6832.303154241738 7586.6289668646505 6887.232994111345 6710.029426457133 5762.437438297903 5041.470942743884 1.345471530780694 1.1684584948848469 1.3897483057367612 1.2658728342215868 1.2256202661077749 1.35522017915731 1.5048443307570731 1.366115776988468 1.3309665973806277 1.1430071706734115 1.0 12.299629012868966 -10.541105486401198 0.8343788148223223 0.9987897366811938 1.326678393132108 0.5121569611919828 0.09306721762982921 0.30396932822024303 0.37756095837385245 0.0607679719062231 0.016876859672113706 2.876699604234417e-11 10.541105486401198 0.32788865645091425 EVKNEES(ph)EKEDA ddPTM_A549_MK2206_60min_R1 4 EVKNEESEKEDA 12 2 Q9BYD6 Q9BYD6 MRPL1 39S ribosomal protein L1, mitochondrial 1 EVKNEES(1)EKEDA;EVKNEES(1)EKEDA;EVKNEES(1)EKEDA;EVKNEES(1)EKEDA 100.58 7.904199999999999e-05 131028400.0 24757.3 26013.3 25746.3 24510.399999999998 11566.77 7940.33 7887.919999999999 7566.57 9815.210000000001 34835.7 34951.700000000004 True False 28935.726982128213 27337.265858212166 29397.512484211653 30515.449100313665 9865.313455407562 8780.570450235524 9321.052961109712 8639.15446914878 7592.080606669601 26966.29117555562 26272.22827215343 1.1013807691674897 1.0405385327436272 1.1189577138141262 1.1615097426912102 0.3755034918703126 0.3342149116275098 0.35478730104478123 0.3288321941959384 0.28897741478276634 1.0264181209226872 1.0 14.681250947012009 -6.752797684938174 24.900539375650784 0.5653738735880034 1.1019041506405247 0.5528780400014426 0.24776280718496121 141.0240867296679 406349.27606156265 0.04411924975616288 0.09071814788506406 1.7668607169039558e-07 6.752797684938174 0.5365302770525213 EVKNEES(ph)EKEDA ddPTM_A549_PD325901_60min_R1 4 EVKNEESEKEDA 12 2 Q9BYD6 Q9BYD6 MRPL1 39S ribosomal protein L1, mitochondrial 1 EVKNEES(1)EKEDA;EVKNEES(1)EKEDA;EVKNEES(1)EKEDA;EVKNEES(1)EKEDA 132.05 4.8402e-07 295494000.0 28287.999999999996 28626.800000000003 28464.1 27342.5 33069.4 32130.3 30826.899999999998 31324.199999999997 31435.1 30396.7 35136.6 True False 31159.776935475053 31039.280901763323 30395.84499453813 29031.384125677025 30746.71942723665 31868.64148956703 32000.034548626933 30699.414257640485 30113.992065504903 28477.447174466735 30815.0209492589 1.0111879199038625 1.0072776180445795 0.98639702515825 0.9421179422036132 0.9977834990884895 1.0341917840018042 1.0384557129238796 0.9962483656328264 0.9772504167721211 0.9241417431245205 1.0 14.911346151456934 -5.651792893452933 6.151886357942652 0.993098140073794 1.0100902802062832 0.0431645872610158 0.0323033888351138 0.5148085853792828 25.50332443986367 0.0036662794067801835 0.014605006036958197 2.2294980998525175e-06 5.651792893452933 0.016992140132489175 EVLAS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 EVLASPDR 8 0 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EVLAS(1)PDR;EVLAS(1)PDR 71.45100000000001 0.0061201 5409700.0 1262.28 1229.55 1447.91 1016.74 1465.67 1484.06 1060.75 1108.92 1633.8600000000001 1658.6 1680.7800000000002 True False 1475.3220042169696 1292.1288431673331 1653.2454100594996 1265.8413456431936 1250.0718845613083 1641.1022441607 1253.4745444295997 1266.1128059250705 1263.793318738284 1283.9211080522728 1263.3959388318758 1.1677431902947533 1.0227425967207266 1.3085726803808433 1.0019355822954272 0.9894537778213164 1.2989611520186204 0.9921470426670445 1.002150447860159 1.0003145331516385 1.0162460307094023 1.0 10.303091124477982 EVLAS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 EVLASPDR 8 0 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EVLAS(1)PDR;EVLAS(1)PDR 72.643 0.0055588 6502300.0 1166.85 1060.65 1026.1799999999998 1054.19 1357.28 979.9 1349.51 1329.0500000000002 1320.0900000000001 1391.12 1427.74 True False 1285.3077530104301 1150.0346978514992 1095.8227457216324 1119.3049220608007 1261.949335161805 971.9200192848095 1400.866341530208 1302.5410551304458 1264.6112080366336 1303.284445789976 1252.1370311895532 1.0264912872909477 0.9184575403531873 0.8751619977891562 0.8939156771024018 1.007836445794539 0.7762089891722694 1.1187803783738903 1.0402543992273816 1.0099623096644859 1.040848096754899 1.0 10.29017674102176 -7.775864905069706 24.999717652684232 1.015833627167376 0.917708489670382 0.4210857504190787 0.07036339968417518 203.13293206559916 352032.5419004699 0.010258449286620522 0.014208424175277337 1.6754639774858657e-08 7.775864905069706 -0.09812513749699403 EVLAS(ph)PDRLWGSR ddPTM_A549_PD325901_60min_R1 1 EVLASPDRLWGSR 13 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EVLAS(1)PDRLWGSR 83.54 0.00012437 15967000.0 792.69 815.19 598.95 933.59 920.2 681.86 745.03 639.06 859.82 806.22 1146.8 True False 873.1633052524643 883.8889222095536 639.5983487789392 991.2557339632735 855.5683265176623 676.3071582299622 773.3825243460593 626.3134469671286 823.6847555045932 755.3151316096337 1005.7508701641614 0.8681705690296287 0.8788348570509145 0.6359411338859118 0.9855877467960611 0.8506761981503572 0.6724400428503468 0.7689603333078158 0.6227321949668311 0.8189749369743515 0.7509962496839293 1.0 9.974057270829435 -10.19615271285233 0.9391517912431078 0.9854437050068614 0.7888646900243793 0.0 0.1270289164781734 0.428975746478837 0.7480653024572255 0.04653176308215767 0.020260826231958302 6.365716411011571e-11 10.19615271285233 -0.1965790149824821 EVLDEDT(ph)DEEKETLK ddPTM_A549_MK2206_60min_R1 4 EVLDEDTDEEKETLK 15 1 Q9Y3P9 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK 253.48 4.276899999999999e-77 178360000.0 20300.7 19984.3 20375.0 17658.4 27026.2 20532.5 20713.2 19791.2 28155.1 27420.3 28427.5 True False 23726.961855537164 21001.415510153234 23264.481376578857 21984.708792715697 23050.68178139066 22705.235521629573 24476.520323996414 22596.663208008013 21778.01480445586 21226.035185774574 21368.167190913235 1.1103882538707859 0.982836540098022 1.0887448216182072 1.028853274887546 1.0787393029755454 1.062572906640534 1.1454665299701043 1.0574918759348342 1.0191802885984957 0.9933484232003247 1.0 14.38317554875556 -8.782960138931074 3.5514534616167066 1.008312513122126 1.0688429512395778 0.350580202907839 0.03984467846819332 0.19429703175281215 5.029810835726429 0.006734815073863099 0.007284521258577801 1.648313672585927e-09 8.782960138931074 0.060530438117451846 EVLDEDT(ph)DEEKETLK ddPTM_A549_PD325901_60min_R1 2 EVLDEDTDEEKETLK 15 1 Q9Y3P9 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK 186.23 8.767499999999999e-34 361400000.0 11535.599999999999 10964.4 11720.3 11471.0 13538.4 11636.1 12258.099999999999 11249.2 12276.3 12424.3 12386.900000000001 True False 12706.68561994011 11888.408467565148 12515.710037889316 12179.537617468808 12587.509488944495 11541.339459536666 12724.5887033897 11024.825881173325 11760.369802983218 11639.827577655697 10863.389827028645 1.1696796140303514 1.0943553215761628 1.1520998727993372 1.1211544289026179 1.1587091772796514 1.0624068217474116 1.1713276340070482 1.0148605597990252 1.0825690682408213 1.071472879367289 1.0 13.407186733478763 -10.033853379428976 0.1908189286324711 0.93317524102279 1.167549785166099 0.3928013388768592 0.04480206501221692 2.795949809866134 0.2220597448670384 0.18751829000583092 0.06785938418864423 9.250104106089833e-11 10.033853379428976 0.23437454414330894 EVLDEDT(ph)DEEKETLKNQLR ddPTM_A549_MK2206_60min_R1 2 EVLDEDTDEEKETLKNQLR 19 2 Q9Y3P9 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 EVLDEDT(0.999)DEEKET(0.001)LKNQLR;EVLDEDT(1)DEEKETLKNQLR 95.12299999999999 9.296799999999999e-07 33441000.0 13798.7 16259.9 16259.0 14226.8 21499.0 15621.1 13633.5 15972.5 24452.0 22995.0 24266.0 True False 16127.583214174903 17087.459458351834 18564.77068475072 17712.366638665328 18336.525579553087 17274.114433553044 16110.530475117574 18236.650788729745 18913.661041820305 17800.4135292789 18240.08249247034 0.8841836773946886 0.936808233482808 1.0178008072284987 0.9710683406161754 1.0052874260367275 0.9470414643510491 0.8832487726833547 0.9998118591984432 1.0369284815256743 0.9758954509458528 1.0 14.154824633789426 -8.505718838763226 24.388900554927567 1.0174874913164564 0.9534779641198015 0.2559725296899844 0.042209303220031504 464.09144247291994 659601.2196721298 0.006932439374916302 0.008279067128228791 3.120909399692951e-09 8.505718838763226 -0.06400952719665498 EVLDEDT(ph)DEEKETLKNQLR ddPTM_A549_PD325901_60min_R1 2 EVLDEDTDEEKETLKNQLR 19 2 Q9Y3P9 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 EVLDEDT(1)DEEKETLKNQLR;EVLDEDT(0.997)DEEKET(0.003)LKNQLR 214.92 8.1875e-67 61366000.0 15813.5 15640.5 20781.6 19920.9 20620.6 25495.9 25447.0 25273.4 22292.9 23330.1 23396.4 True False 17418.87487871658 16958.579825339515 22191.964345912704 21151.36874935354 19172.280193208113 25288.26984353871 26415.3995101327 24769.302210401253 21356.00693864802 21857.033504460214 20518.791121999286 0.848923056682461 0.826490202298386 1.0815434600393938 1.03082918596876 0.9343766930134833 1.2324444307260292 1.2873760131907257 1.20715212037247 1.0408023948229148 1.0652203326455294 1.0 14.324658115676124 -5.76022322894269 24.99998569512453 1.0624631270647609 0.8377065489881327 0.44743443825245044 0.10566470014975024 25.528057611710302 524703.7285736857 0.016436936164812194 0.057325950308796426 1.7369078223291028e-06 5.76022322894269 -0.2247565780766282 EVLHGNQR ddPTM_A549_MK2206_60min_R1 4 EVLHGNQR 8 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ;;; 104.37 0.0022224 22015900.0 1809.8199999999997 1881.93 2028.6699999999998 1598.15 2571.88 1597.85 1282.95 1864.1 2032.15 3245.87 2782.64 False True 2115.2733701492193 1977.712198627057 2316.3659108821726 1989.696821743679 2193.5598589488336 1766.9334264330116 1516.045408226213 2128.3418835668253 1571.8712696767193 2512.62571264538 2091.633691042925 1.0113020167955447 0.9455346828157731 1.1074433925986304 0.951264473442088 1.0487304102732666 0.844762366374003 0.7248140124718906 1.0175500101576567 0.7515040881240332 1.2012742591617662 1.0 11.030414498393734 -7.26321695506423 24.9444338264743 0.8756420154018041 1.0109481943036405 0.039551750976190125 0.13461461273474412 164.24956159064502 2304893.7279542545 0.016303739425360918 0.026902860121055666 5.454852917480525e-08 7.26321695506423 0.13530617890183638 EVLHGNQR ddPTM_A549_PD325901_60min_R1 2 EVLHGNQR 8 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ; 130.27 0.00115 30116000.0 1680.44 1570.0900000000001 1868.33 1658.37 2275.5 1782.9 1830.33 2359.8 2210.3 2082.43 2303.9 False True 1851.0370317254565 1702.4069945313352 1995.1261089809768 1760.8037484684633 2115.676730048837 1768.380653518611 1899.9842097450073 2312.7319377727117 2117.408777525297 1950.9450144102734 2020.534905625404 0.9161123752784247 0.8425526279163187 0.9874247177944384 0.8714542587540463 1.0470874441013351 0.8752042088435265 0.9403372366669986 1.1446137017152227 1.0479446663505712 0.9655586790302982 1.0 10.980521559587412 -8.030922888336388 24.63221988030571 1.0328999142857092 0.9243152981850463 0.400975184550725 0.06697215882113372 412.62820922654225 328686.07983368536 0.009888136833066219 0.01277424253256588 9.312732140913939e-09 8.030922888336388 -0.10858461610066283 EVLS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 EVLSPLK 7 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 EVLS(1)PLK;EVLS(1)PLK 93.551 0.012135 50170000.0 6778.4 6614.7 6643.4 5736.0 7904.2 6521.8 6789.1 5779.1 8990.8 8526.099999999999 8226.5 True False 7922.428204031044 6951.359976331954 7585.5340160571295 7141.320257498821 6741.502650630428 7211.932547179532 8022.591590466183 6598.3051227514825 6954.398155357349 6600.048088366377 6183.633010150299 1.281193141802974 1.1241546781514118 1.2267115470154262 1.1548745285783453 1.0902171328027388 1.16629375244962 1.297391287176531 1.0670596252915572 1.1246460040467887 1.0673414928622933 1.0 12.594238984560828 -11.873561976898204 0.18318660355931818 0.7848351469714128 1.2219949522756284 0.39808501086448345 0.06859054287602717 9.254519585811948 0.2970425634870297 0.9551426107851316 0.09296599726481702 1.3379442674073807e-12 11.873561976898204 0.4371598053042156 EVLS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 EVLSPLK 7 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 EVLS(1)PLK;EVLS(1)PLK 108.81 0.008856200000000002 81602000.0 19391.4 18959.1 18964.3 18500.5 23467.0 19464.2 19160.5 21852.0 24039.0 24596.0 25913.0 True False 21360.000652805804 20556.849893967246 20251.331439600024 19643.233867316 21818.75887675504 19305.690008534944 19889.66331252792 21416.144717437615 23028.724427874342 23043.00436242037 22725.865276041084 0.9398982346042836 0.904557412634117 0.891113768105901 0.8643558178629629 0.9600848465716125 0.8495029682714926 0.8751993849711301 0.9423687264403414 1.0133266279701372 1.0139549840029032 1.0 14.472047604912216 -8.582104341786625 3.524602529848522 1.0062455335100808 0.8973608123222183 0.7225341753241098 0.03011132565154613 0.08412209923676622 2.142073226261117 0.004973738080132375 0.005710979734163238 2.6175540500131013e-09 8.582104341786625 -0.10888472118786252 EVLT(ph)PT(ph)STSDNETR ddPTM_A549_PD325901_60min_R1 1 EVLTPTSTSDNETR 14 0 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 2 EVLT(0.971)PT(0.303)S(0.269)T(0.239)S(0.213)DNET(0.005)R 41.644 0.042522000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EVLT(ph)PTSTS(ph)DNETR ddPTM_A549_MK2206_60min_R1 1 EVLTPTSTSDNETR 14 0 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 2 EVLT(0.666)PT(0.229)S(0.149)T(0.21)S(0.742)DNET(0.005)R 61.409 0.010006999999999999 1510100.0 621.34 696.38 617.89 713.97 1145.2 762.86 559.17 665.03 941.41 1156.0 1435.8 True False 726.2070016954814 731.8227675205293 705.5160931422977 888.8926820513316 976.7425970372672 843.585338854515 660.7639509862827 759.3000390689589 728.1821381228549 894.8587971231316 1079.2512339359141 0.6728803997259117 0.6780837904179638 0.653708859400008 0.8236197968564138 0.9050187447784434 0.7816394480996323 0.6122429423374824 0.7035433596863936 0.6747104985622785 0.8291478100605705 1.0 10.075815026933038 -10.762425498854524 0.9437704139094271 1.0049451412701993 0.7236121409396403 0.33511771689952463 0.09386337136515611 0.34204097356945856 0.5257720534378252 0.06672211618275381 0.015825293600527087 1.7281224062323597e-11 10.762425498854524 -0.28133300033055897 EVLT(ph)PTSTSDNETR ddPTM_A549_MK2206_60min_R1 2 EVLTPTSTSDNETR 14 0 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 EVLT(0.949)PT(0.038)S(0.01)T(0.002)S(0.001)DNETR;EVLT(0.991)PT(0.007)S(0.002)TSDNETR 134.37 6.2774e-09 12674900.0 2690.6000000000004 3210.0 2573.7 2954.6 3956.3 3321.7 2862.9 2814.7 4273.4 4066.6 6372.2 True False 3144.707501145688 3373.3752889814473 2938.689360436858 3678.4771326370355 3374.333510878919 3673.200089233992 3383.0518720221585 3213.692344657231 3305.4817232175246 3147.952235623641 4789.806876226799 0.6565416064588707 0.7042821091022452 0.6135298220524141 0.7679802605183069 0.7044821634932119 0.7668785368915706 0.706302354028766 0.6709440333821637 0.6901075155291937 0.6572190313659285 1.0 12.225751772705648 -10.677624794645592 0.6826483632444061 1.0281381412580037 0.6960034543899531 0.0 0.10957152494848868 0.23541767099340818 0.16961586491711012 0.04542683249947988 0.0087802674630253 2.1007540300275505e-11 10.677624794645592 -0.3321346868680506 EVLT(ph)PTSTSDNETR ddPTM_A549_PD325901_60min_R1 2 EVLTPTSTSDNETR 14 0 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 EVLT(0.899)PT(0.051)S(0.021)T(0.021)S(0.007)DNET(0.001)R;EVLT(0.998)PT(0.001)S(0.001)TSDNETR 127.07 2.963e-08 13702300.0 3225.3 3092.2 3258.8 5828.0 3906.8 7526.6 4381.5 3928.3 4015.2 3509.8 7508.3 True False 3552.7300816596326 3352.7905460768425 3479.961764756335 6187.982323651664 3632.3998457283237 7465.305865036277 4548.240380148799 3849.9469748082656 3846.4551072341187 3288.190629013785 6584.826699035205 0.5395328144596685 0.5091691397995465 0.5284819060258962 0.9397335125855801 0.551631806234253 1.133713339203001 0.6907152743769548 0.5846694454954071 0.5841391555221481 0.49935871956896966 1.0 12.684929756467717 -10.851245618513808 1.0532594661634371 1.0034377844322762 0.6740287759269211 0.0 0.23662020681771323 0.5529053832591947 1.0705161565455594 0.13672404462338564 0.03200002840109005 1.4084919898739321e-11 10.851245618513808 -0.32940900850535504 EVLTPT(ph)S(ph)TSDNETR ddPTM_A549_MK2206_60min_R1 1 EVLTPTSTSDNETR 14 0 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 2 EVLT(0.124)PT(0.479)S(0.465)T(0.462)S(0.458)DNET(0.011)R 42.718 0.031125 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EVLYDS(ph)EGLS(ph)GEER ddPTM_A549_MK2206_60min_R1 1 EVLYDSEGLSGEER 14 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 EVLY(0.014)DS(0.987)EGLS(1)GEER 83.69200000000001 0.00033814 4119000.0 891.62 1198.1 775.98 969.93 1529.6 1267.6 790.1 1260.4 1365.7 1008.2 1388.6 True False 1042.103657983914 1259.0781725011432 886.0256323238121 1207.562893541812 1304.5978662488674 1401.7365906352193 933.6509427799451 1439.065559813115 1056.3711305747588 780.4469197746905 1043.7722965896442 0.99840133848045 1.2062766722349079 0.8488686998292219 1.1569217706652368 1.2498874232545052 1.3429524765268872 0.8944967650803699 1.378715994393631 1.012070481297769 0.7477176030870657 1.0 10.027591300774032 -8.949643767258035 24.99978998573183 1.0053239161932748 1.1349923091280123 0.18519869583036686 0.17739611350123008 158.60348405737162 78740.1802621546 0.02599973232232453 0.02767522806204076 1.1229391744586469e-09 8.949643767258035 0.12966839293473753 EVLYDS(ph)EGLS(ph)GEER ddPTM_A549_PD325901_60min_R1 1 EVLYDSEGLSGEER 14 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 EVLY(0.011)DS(0.99)EGLS(0.999)GEER 63.037 0.0066798000000000005 13011000.0 605.81 794.98 646.91 718.08 1185.2 765.15 494.01 708.13 769.99 653.72 879.33 True False 667.3113852262492 861.9757545825522 690.8132027858481 762.4341707219951 1101.9556407180326 758.918872084674 512.8098208826445 694.0057916327621 737.6299980123528 612.4440076354466 771.1779845321345 0.8653143614195625 1.1177390587796716 0.8957895798918031 0.9886617434813778 1.4289251804647631 0.9841033941666554 0.6649694767852596 0.8999294657689276 0.9564977382748615 0.7941668718759002 1.0 9.59092005609925 -7.510288578469232 24.993367062216727 0.9447969238170618 1.0652254248517734 0.16665959900188887 0.1694269271979495 1118.7074139658346 2220803.146364357 0.024917865140797454 0.03865609914957032 3.088242685954505e-08 7.510288578469232 0.12042850103471159 EVLYDS(ph)EGLSGEER ddPTM_A549_MK2206_60min_R1 1 EVLYDSEGLSGEER 14 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EVLYDS(0.997)EGLS(0.003)GEER 161.76 2.9703000000000003e-19 5942200.0 1183.8 1428.5 1525.9 1139.5 1664.5 1790.6 999.8 1796.3 1817.7 1748.9 2155.4 True False 1383.5964988687529 1501.2045483831753 1742.29556478634 1418.6775511540984 1419.6542549498167 1980.0801034959172 1181.4507183791795 2050.9310259380336 1405.9938522704388 1353.822275336198 1620.1546939862578 0.8539903652437825 0.9265809949848582 1.075388400412287 0.8756432681521038 0.8762461141638727 1.2221549651065062 0.7292209335099458 1.2658859265419193 0.8678145719598578 0.835612969774651 1.0 10.661915854310225 -5.371061626420551 4.21765673593839 0.9629932753504247 0.8549889208941751 0.044498403453608226 0.15618587674190137 0.558550889494103 15.220581639541141 0.01854717694181027 0.1326260065724077 4.255380249706664e-06 5.371061626420551 -0.10800435445624956 EVLYDS(ph)EGLSGEER ddPTM_A549_PD325901_60min_R1 1 EVLYDSEGLSGEER 14 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EVLYDS(1)EGLSGEER 147.35 3.388e-13 8363700.0 681.02 642.86 512.62 724.33 822.31 809.76 790.0 832.37 703.41 687.4 968.55 True False 750.156649059574 697.036068317366 547.4094758344768 769.0702190272152 764.5537824154951 803.1655830350725 820.0638823045877 815.7677273683669 673.8481238741667 643.9974466875819 849.4244901443134 0.8831351788928593 0.8205980359701458 0.6444474843684744 0.9054015135548465 0.9000844586969713 0.9455408836853977 0.9654347052852956 0.9603769809247807 0.7932996183800669 0.7581573808616816 1.0 9.730341894057418 -6.473416910023523 24.988498454663148 0.9124174913974784 0.7845823374740041 0.27434168038678064 0.0866884262749159 367.8172044700077 185823.64467114324 0.012678412895884008 0.029461509972022383 3.36188683098746e-07 6.473416910023523 -0.12783515392347433 EVLYDSEGLS(ph)GEER ddPTM_A549_PD325901_60min_R1 1 EVLYDSEGLSGEER 14 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EVLYDS(0.008)EGLS(0.992)GEER 130.07 1.0047999999999998e-08 7750400.0 967.54 883.58 863.94 776.67 1067.3 1191.6 653.82 726.4 1056.4 1130.3 1258.0 True False 1065.7639485346972 958.0423875242798 922.5721636932584 824.6431419544506 992.3365299851127 1181.8960046737209 678.7014778840319 711.9113821502239 1012.0031817299571 1058.9326651017946 1103.2739751190397 0.9660011679507845 0.8683630803680564 0.8362131116105732 0.7474509147788737 0.8994470569996386 1.0712624709072813 0.6151703866764392 0.6452716172095068 0.9172727758948227 0.9598093392781599 1.0 10.107575383355563 -8.980782984386817 14.152663192669527 0.9635276649320879 0.8296260014854208 0.1803839718597745 0.12485628900325989 1.4489254748150484 1065.7590658832646 0.022854191774137632 0.023451434494020998 1.045242393145768e-09 8.980782984386817 -0.1339016634466671 EVMESAVGNSSGS(ph)GQNEESPRK ddPTM_A549_MK2206_60min_R1 1 EVMESAVGNSSGSGQNEESPRK 22 1 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMES(0.004)AVGNS(0.037)S(0.151)GS(0.658)GQNEES(0.151)PRK 44.931000000000004 0.009089299999999998 4937000.0 1174.7 1467.5 1275.0 1062.9 2379.8 1505.2 1195.0 1597.8 2210.5 2289.0 2342.7 True False 1372.9606413423921 1542.189481800707 1455.8141720313154 1323.3105477153943 2029.7345725019982 1664.4792649291035 1412.1160316694536 1824.293043057279 1709.8252794431448 1771.9133102204578 1760.9429347692353 0.7796735568392018 0.875774820041403 0.8267242187618613 0.7514783821707481 1.15264074288017 0.945220445287869 0.8019090248682623 1.035975105744324 0.9709714299556281 1.0062298301862123 1.0 10.782132442519808 -6.7349981101941445 24.999988818001732 0.9820736287802909 0.8145322629412409 0.5171720121015624 0.08308507223749434 143.50487448320933 135681.88916730232 0.011302091886150504 0.023521768066185427 1.8407800114930768e-07 6.7349981101941445 -0.16754136583905 EVMESAVGNSSGSGQNEES(ph)PR ddPTM_A549_MK2206_60min_R1 6 EVMESAVGNSSGSGQNEESPR 21 0 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMESAVGNSSGSGQNEES(0.999)PR;EVMES(0.003)AVGNS(0.107)S(0.107)GS(0.107)GQNEES(0.676)PR;EVMESAVGNSSGSGQNEES(0.999)PR;EVMESAVGNSSGS(0.001)GQNEES(0.999)PR;EVMESAVGNSSGSGQNEES(1)PR;EVMESAVGNSSGSGQNEES(1)PR 212.79 3.433899999999999e-67 34090900.0 3734.84 3939.39 3876.42 2803.31 6430.929999999999 4855.66 5114.22 4603.65 6598.84 7224.360000000001 5992.27 True False 4365.189683928847 4139.888124504863 4426.15464529069 3490.1210758453694 5484.948716001458 5369.482718273753 6043.407574464062 5256.231485586833 5104.213276182134 5592.372058464073 4504.22398076136 0.9691324637881328 0.9191124025331192 0.982667528123796 0.7748551339259612 1.2177344509129682 1.192099402962225 1.3417200388517383 1.1669560634723053 1.1332059191513288 1.241583918195556 1.0 12.13706285450902 -6.768106991353995 24.999997568838456 1.112577149757225 0.917077318954781 0.5418538596129422 0.10864056480974707 128.63649652772244 482320.30288380315 0.017614840304368905 0.033838219862122224 1.7056621359495234e-07 6.768106991353995 -0.19549983080244404 EVMESAVGNSSGSGQNEES(ph)PR ddPTM_A549_PD325901_60min_R1 4 EVMESAVGNSSGSGQNEESPR 21 0 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMESAVGNSSGSGQNEES(1)PR;EVMESAVGNSSGSGQNEES(1)PR;EVMESAVGNSSGSGQNEES(1)PR;EVMESAVGNSSGSGQNEES(1)PR 262.8 1.1532999999999998e-111 18320300.0 3758.09 3842.95 3917.09 3528.92 4634.65 3714.12 3665.01 3873.89 4071.79 4084.7499999999995 4246.14 True False 4139.608530240365 4166.808883334199 4182.927282775684 3746.8933736411873 4309.128172674512 3683.873438132559 3804.4839611204275 3796.6222249420875 3900.666826331147 3826.8381878922023 3723.8916984991743 1.1116350488680258 1.118939330328412 1.1232677052508033 1.0061767841291633 1.157157221949071 0.9892536454852476 1.0216419458851969 1.0195307845478496 1.047470534092927 1.027644866641669 1.0 11.862595400440055 -6.5771023427521085 0.5769677877988577 1.0189760452723704 1.134610142175973 0.44346720859649547 0.042243258338619416 0.8549011585197868 0.41874648842360973 0.008043302645991917 0.05023696456518673 2.64787608541348e-07 6.5771023427521085 0.11563409690360249 EVMESAVGNSSGSGQNEES(ph)PRKR ddPTM_A549_MK2206_60min_R1 6 EVMESAVGNSSGSGQNEESPRKR 23 2 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMESAVGNS(0.002)S(0.004)GS(0.017)GQNEES(0.977)PRKR;EVMESAVGNSSGS(0.003)GQNEES(0.997)PRKR;EVMESAVGNSSGS(0.001)GQNEES(0.999)PRKR;EVMESAVGNSSGSGQNEES(1)PRKR;EVMES(0.001)AVGNS(0.086)S(0.086)GS(0.086)GQNEES(0.741)PRKR;EVMESAVGNSSGSGQNEES(1)PRKR 228.58 1.9063999999999999e-88 121648400.0 8998.39 11558.69 10455.47 9491.93 12603.900000000001 8495.560000000001 7856.18 8562.73 14929.400000000001 15544.800000000001 15096.7 True False 10517.098242486563 12146.977949843293 11938.212863724124 11817.453276108932 10749.883006285374 9394.554520303685 9283.546213958936 9776.523199760824 11547.914737352863 12033.218883667525 11347.7727422763 0.9267984547579944 1.0704283761860636 1.0520313664062138 1.0413896668976133 0.9473121510652501 0.8278765123048446 0.8180941251469501 0.8615367457385041 1.0176371169587255 1.060403583765613 1.0 13.470121543234002 EVMESAVGNSSGSGQNEES(ph)PRKR ddPTM_A549_PD325901_60min_R1 3 EVMESAVGNSSGSGQNEESPRKR 23 2 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMESAVGNSSGSGQNEES(1)PRKR;EVMESAVGNSSGSGQNEES(1)PRKR;EVMESAVGNSSGS(0.002)GQNEES(0.998)PRKR 184.66 2.4800999999999997e-50 135352000.0 6954.200000000001 6823.400000000001 5740.9 8093.5 7567.500000000001 7413.799999999999 6873.0 7212.400000000001 8322.2 8675.1 9392.1 True False 7660.185264588544 7398.431864724387 6130.511996836153 8593.41711332786 7035.984906457736 7353.424470837559 7134.55577604991 7068.543023981653 7972.446875230076 8127.352705498168 8236.931241427294 0.9299804793879994 0.8982024552438037 0.7442713575175917 1.0432789665777025 0.8541997863318987 0.8927383579279896 0.8661667272596578 0.8581524862597758 0.9678904244256642 0.9866966795378835 1.0 13.007891230397234 -8.871832574953157 4.8489836649129705 0.9861379104159014 0.8854622911569485 0.30395713578948436 0.06704219210476833 0.17587458867443606 6.658483102113843 0.01110170773813962 0.011744468230184473 1.3432827108105735e-09 8.871832574953157 -0.10067561925895285 EVMS(ph)PTGSAR ddPTM_A549_PD325901_60min_R1 1 EVMSPTGSAR 10 0 H0YHB7;O43347 H0YHB7 MSI1 RNA-binding protein Musashi homolog 1 1 EVMS(0.881)PT(0.11)GS(0.008)AR 47.894 0.011446 3750800.0 1065.7 1117.8 644.71 911.55 1023.5 938.57 1087.9 1231.7 1026.9 1234.8 1105.9 True False 1173.8890794731244 1212.0009289194406 688.4638975561729 967.8543732197452 951.612890883316 930.9265971018918 1129.300629821723 1207.132777250042 983.7429641409437 1156.8345172677132 969.8813108776995 1.2103430247674398 1.2496383993858315 0.7098434518066377 0.9979101178306858 0.9811642725872803 0.9598355867476657 1.1643699256352884 1.2446190721601187 1.0142921129707099 1.1927588502770812 1.0 9.92166439822399 -2.0000001567925922 0.006852054693955872 3.272494958363639e-09 2.179825236681556 0.0 0.16155343535595418 98094.10908108429 50.58931478536554 7247.9105388364105 8928.877901315547 0.009999996389717795 2.0000001567925922 2.1798252334090606 EVNDS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EVNDSPR 7 0 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 EVNDS(1)PR;EVNDS(1)PR 78.939 0.016547 40739000.0 1712.1 1091.08 1154.37 759.1099999999999 475.85 494.45 456.03999999999996 479.59999999999997 594.55 2070.2799999999997 1938.7799999999997 True False 2001.0606231738382 1146.6113116205224 1318.0770241315988 945.091984077743 405.8530953546832 546.7723708106535 538.8965649226251 547.5847687134004 459.8853743012538 1602.6023101280948 1457.3274183941166 1.3731029814692441 0.7867904611882045 0.9044481065099543 0.6485103979716342 0.27849136043972045 0.37518841950641557 0.3697841391857262 0.3757458768715163 0.3155676401175644 1.099685828936137 1.0 10.509109329412693 -2.5768918222371755 11.319215956557402 0.643461198878134 0.973356653896745 0.0 0.3587324880892846 0.0 0.0 0.0491806101335892 0.0 0.0026491599317142915 2.5768918222371755 0.32989545501861095 EVNDS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EVNDSPR 7 0 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 EVNDS(1)PR;EVNDS(1)PR 72.643 0.019608 75646000.0 992.41 1279.81 930.51 1160.4 1347.0700000000002 922.71 687.7800000000001 875.02 1161.37 1434.35 1523.51 True False 1093.1587326263718 1387.6640801935857 993.6600042111883 1232.0752725403904 1252.4564503392166 915.1957556835256 713.9538442676574 857.5670396600893 1112.561657672965 1343.784896212298 1336.127928325604 0.8181542421587475 1.0385712705912564 0.7436862766998767 0.9221237326311941 0.9373776446008115 0.6849611749605607 0.5343454239163784 0.6418300384864846 0.8326759991217266 1.0057307146451833 1.0 10.383842430741403 -10.08190110296023 1.075203541947504 0.9791511617110811 0.7968787575606543 0.24907761727897482 0.13693369937575203 0.5405797576179368 1.254004019676263 0.05334486278547564 0.027760059443632662 8.281307232177808e-11 10.08190110296023 -0.18227240415042678 EVNS(ph)QEEEEEELLRK ddPTM_A549_MK2206_60min_R1 2 EVNSQEEEEEELLRK 15 1 Q96RL1-2;Q96RL1-3;Q96RL1;D6RC40;D6RCQ3;Q96RL1-5 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVNS(1)QEEEEEELLRK;EVNS(1)QEEEEEELLRK 140.06 5.5483999999999994e-11 33154000.0 3204.6 4111.8 3213.8 2950.5 4575.4 3979.3 3513.1 3440.2 5097.299999999999 5344.9 5345.0 True False 3745.458135052209 4321.073057082215 3669.5651655484266 3673.372632452978 3902.364720995732 4400.38688475444 4151.384795697035 3927.8588851706427 3942.7696887154707 4137.483377805733 4017.688985504572 0.9322419302652482 1.0755120848508242 0.9133522228295565 0.9142998986995127 0.9712958706049875 1.095253241510382 1.0332767943648262 0.9776413503738026 0.9813526390272113 1.0298167411000123 1.0 11.972150172168599 -7.019105704645715 24.894785201312068 1.0012065767743115 0.9612923958828088 0.19599507661792592 0.052257571838416776 1252.9918590288462 1632652.2141276607 0.007643057227906582 0.013386316024081212 9.569611244071482e-08 7.019105704645715 -0.03991418089150267 EVNS(ph)QEEEEEELLRK ddPTM_A549_PD325901_60min_R1 2 EVNSQEEEEEELLRK 15 1 Q96RL1-2;Q96RL1-3;Q96RL1;D6RC40;D6RCQ3;Q96RL1-5 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVNS(1)QEEEEEELLRK;EVNS(1)QEEEEEELLRK 218.79 2.1039e-46 43971000.0 8417.2 9651.6 9323.099999999999 9374.4 9940.3 11110.2 10614.4 10816.0 10322.9 10334.8 10023.5 True False 9271.70794758487 10464.974204293147 9955.82163035467 9953.435397192887 9242.127620173354 11019.722214775076 11018.336800422547 10600.266395012139 9889.06441185174 9682.258964251992 8790.673044201665 1.0547210550278054 1.1904633640305677 1.1325437290517293 1.1322722784870471 1.0513560877195256 1.2535697960059717 1.2534121955190052 1.2058537886361367 1.1249496326535058 1.1014240793130645 1.0 13.10175791196019 -10.035263067233117 0.8934000057782198 1.0120632549604822 1.1586687541808403 0.21605337519411172 0.07015652250028487 0.36928663530438566 0.5941729084065798 0.02787910328969598 0.013358123639851002 9.22012762856112e-11 10.035263067233117 0.14660549922035804 EVPAVPET(ph)LK ddPTM_A549_MK2206_60min_R1 2 EVPAVPETLK 10 0 P18124 P18124 RPL7 60S ribosomal protein L7 1 EVPAVPET(1)LK;EVPAVPET(1)LK 117.86 7.453e-05 7671200.0 5034.2 5682.0 4834.0 4387.1 6223.200000000001 6313.6 5146.5 6073.1 7736.299999999999 7723.5 7545.2 True False 5883.849885626854 5971.1895302157545 5519.5338883132345 5461.939696944406 5307.775523823189 6981.700961371509 6081.552432624973 6933.980523088726 5984.040402332502 5978.7559857962915 5671.518603073728 1.0374381708698006 1.052837863738932 0.9732021129793837 0.9630471270929556 0.9358649588042601 1.2310108544099136 1.0722970086581438 1.2225968049070308 1.0551037246160844 1.0541719783050794 1.0 12.469519366881219 EVPAVPET(ph)LK ddPTM_A549_PD325901_60min_R1 2 EVPAVPETLK 10 0 P18124 P18124 RPL7 60S ribosomal protein L7 1 EVPAVPET(1)LK;EVPAVPET(1)LK 122.33 3.939e-05 11956500.0 6204.7 5338.0 5342.6 5531.1 6560.700000000001 5212.9 4961.5 6010.700000000001 6077.0 5623.6 6087.5 True False 6834.596576341278 5787.851993712632 5705.1809636636835 5872.74348496049 6099.899065186292 5170.447870731484 5150.312597536974 5890.811873197069 5821.604823336756 5268.524936270417 5338.776091841938 1.2801804119084652 1.0841158898866197 1.0686308744773245 1.100016817325322 1.1425650673957668 0.9684706348019216 0.96469911997378 1.1034011863128488 1.090438093523461 0.9868413369725563 1.0 12.382293328333342 -2.000000006503752 0.8969426005598655 1.0454428410222194 112.4233665079732 0.5790746921452783 0.057117017450806905 492.5969894260339 1.0466868075649527 0.009040934761499907 112321.47199800868 0.009999999850245573 2.000000006503752 111.37792366695098 EVPAVPET(ph)LKK ddPTM_A549_MK2206_60min_R1 2 EVPAVPETLKK 11 1 P18124 P18124 RPL7 60S ribosomal protein L7 1 EVPAVPET(1)LKK;EVPAVPET(1)LKK 77.91199999999999 0.00067885 42398000.0 3647.6000000000004 4070.5 4319.7 4041.2 5261.0 4494.5 4323.700000000001 4486.8 6249.0 5872.2 5786.6 True False 4263.225704742068 4277.671063488776 4932.2984148420965 5031.294181416359 4487.11386920456 4970.105006792358 5109.260323120684 5122.817640248715 4833.611477602449 4545.665941579977 4349.627517964595 0.9801358132700616 0.9834568697713474 1.1339588032471712 1.156718399595455 1.0316087643532983 1.1426507180822036 1.1746431854264978 1.1777600769469874 1.1112702082279295 1.0450701635498014 1.0 12.086676145165079 -4.174738671620036 12.007604269468503 1.075683221212743 0.5816012172515774 0.0 0.07517812541238254 0.0 0.0 0.01096710001034646 0.0 6.687462017315041e-05 4.174738671620036 -0.49408200396116553 EVPAVPET(ph)LKK ddPTM_A549_PD325901_60min_R1 2 EVPAVPETLKK 11 1 P18124 P18124 RPL7 60S ribosomal protein L7 1 EVPAVPET(1)LKK;EVPAVPET(1)LKK 92.65 0.00018076 75341000.0 10118.8 11252.099999999999 11081.099999999999 11236.2 12130.0 11646.9 11113.4 12902.8 12131.0 11716.5 11486.099999999999 True False 11146.053126933153 12200.353956248382 11833.130082067459 11930.234554738305 11278.03064622826 11552.051507917382 11536.326518485826 12645.44353194922 11621.176256688861 10976.7181904496 10073.382516386971 1.1064856426132141 1.2111476891105186 1.1746928167194883 1.1843325253787078 1.119587251638823 1.1467897192551728 1.1452286756428633 1.2553324080941157 1.1536518381768985 1.0896755059775718 1.0 13.298260583272898 -10.390883596608498 0.7701598800100112 1.000027087957829 1.168146646822802 0.4621114941161939 0.0470467024128548 0.2763104519318917 0.2995855369436759 0.026211293542679828 0.007987796479421053 4.065522822486866e-11 10.390883596608498 0.16811955886497287 EVPAVPETLK ddPTM_A549_MK2206_60min_R1 2 EVPAVPETLK 10 0 P18124 P18124 RPL7 60S ribosomal protein L7 0 ; 108.98 0.00062489 5329500.0 4011.5 4187.700000000001 4165.9 4133.1 5495.3 4393.8 4380.0 4045.3 6121.3 5776.9 6188.7 False True 4688.5431282412555 4400.836042887102 4756.687262168827 5145.709685541909 4686.948649579891 4858.748999631608 5175.789304361677 4618.73366321167 4734.835323707456 4471.894277768703 4651.874990569158 1.0078824426164579 0.9460348895464747 1.0225311883513974 1.1061582041593792 1.00753968218876 1.0444711024010425 1.1126243320929003 0.9928757055112882 1.0178337408693237 0.9613100710648215 1.0 12.183596612576144 -3.194565882523487 18.162655690085828 1.018729339419154 0.4502090590947959 0.0 0.04952638242170388 0.0 0.0 0.006043964651067031 0.0 0.0006389018085176402 3.194565882523487 -0.568520280324358 EVPAVPETLK ddPTM_A549_PD325901_60min_R1 1 EVPAVPETLK 10 0 P18124 P18124 RPL7 60S ribosomal protein L7 0 89.24700000000001 0.0019025 1988600.0 2246.5 2575.4 2790.1 2886.8 3240.1 2674.8 2719.2 3192.4 3315.8 3104.7 3115.3 False True 2474.5630262141085 2792.437996367085 2979.452964234276 3065.1110796015128 3012.526553738184 2653.0173156271126 2822.6806440033342 3128.7250776106475 3176.448457005106 2908.6687121485825 2732.1378495137888 0.9057240748868077 1.0220706824379404 1.0905207307766331 1.1218727781788096 1.1026261190570208 0.9710407972640339 1.0331399070898486 1.1451563756812035 1.1626237883898818 1.0646127217432346 1.0 11.41581456104 -5.343896989604728 2.53118938628261 1.0781218913757487 0.8848001532078144 0.4449214788774293 0.05580143510475545 0.3654874968523015 3.2969748000541426 0.009824668901527507 0.13844561816795176 4.53005015512272e-06 5.343896989604728 -0.1933217381679343 EVPLNT(ph)IIFMGR ddPTM_A549_MK2206_60min_R1 1 EVPLNTIIFMGR 12 0 P01008;Q8TCE1 P01008 SERPINC1 Antithrombin-III 1 EVPLNT(1)IIFMGR 41.092 0.025972000000000002 13044000.0 1155.1 1339.2 875.11 1215.7 1187.5 959.32 1012.0 1048.3 902.03 1321.4 1753.0 True False 1350.0526405163835 1407.3595598143154 999.2137569304507 1513.5465545748473 1012.8203230717377 1060.8346056549224 1195.8673004598218 1196.8997352841059 697.7216452459177 1022.8948222478426 1317.681719661275 1.0245665704942994 1.0680572848624574 0.7583119216280164 1.1486435092716634 0.768638061801521 0.8050765141734089 0.9075539886576197 0.9083375123332381 0.5295069627476314 0.7762836859501923 1.0 10.363786220320284 -6.791623355791449 24.994784236557628 0.7946328826561853 0.9875077521938032 0.27405169990189693 0.14321818594136973 255.40319282891244 211493.94409191114 0.027215969141323636 0.051437902704568106 1.6157592251862898e-07 6.791623355791449 0.1928748695376179 EVPPPPAEES(ph)EEEDDDGLPK ddPTM_A549_MK2206_60min_R1 2 EVPPPPAEESEEEDDDGLPK 20 0 Q9H6X2;Q9H6X2-5 Q9H6X2 ANTXR1 Anthrax toxin receptor 1 1 EVPPPPAEES(1)EEEDDDGLPK;EVPPPPAEES(1)EEEDDDGLPK 91.475 1.0684e-06 5137500.0 782.11 894.71 897.49 881.7 1153.0 779.58 1009.0 964.14 1139.7 1068.3 1432.1 True False 914.1110472463589 940.246917384607 1024.767577455988 1097.7165395810173 983.3952273698638 862.0746381566779 1192.3222392924508 1100.8097975549158 881.5597697269178 826.970288033427 1076.470046050719 0.8491746245982302 0.873453860452617 0.9519703601745226 1.0197371897232497 0.9135370101357471 0.8008347666703773 1.1076223102229017 1.02261070950696 0.8189357176831116 0.7682241517702791 1.0 10.072092460167864 -5.643511799944274 4.861987445470195 0.9341624336220966 0.8551503851621153 0.07452635086495007 0.09954212804359772 0.40975411969577313 15.217762868786068 0.01334480042261012 0.055587383428210416 2.2724178919839933e-06 5.643511799944274 -0.07901204845998133 EVPPPPAEES(ph)EEEDDDGLPK ddPTM_A549_PD325901_60min_R1 2 EVPPPPAEESEEEDDDGLPK 20 0 Q9H6X2;Q9H6X2-5 Q9H6X2 ANTXR1 Anthrax toxin receptor 1 1 EVPPPPAEES(1)EEEDDDGLPK;EVPPPPAEES(1)EEEDDDGLPK 99.999 2.8719e-08 9302900.0 2401.6 3102.5 2772.7 3056.2 3774.2 2904.1 3116.2 3013.5 2939.8 3605.3 2919.1 True False 2645.4086640355226 3363.958563224696 2960.8720955995736 3244.9745328661984 3509.1132122831577 2880.4499724512857 3234.7886962500684 2953.3933784549818 2816.2504294298824 3377.6607427156528 2560.0692056995154 1.0333348247563054 1.3140107914799612 1.1565593965224634 1.267533911052822 1.3707102934837752 1.1251453538984424 1.2635551761836814 1.153638101610614 1.1000680853314542 1.319363060653174 1.0 11.321967095422506 -9.010659779179328 0.8198447506304168 1.0219864278364774 1.2280624119093353 0.0 0.12624390238120564 0.3132277174410304 0.4431920061881591 0.02243911262612747 0.020125646914061893 9.75753731556624e-10 9.010659779179328 0.20607598407285788 EVPSKEEPS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 EVPSKEEPSPVK 12 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPSKEEPS(1)PVK;EVPS(0.002)KEEPS(0.998)PVK 109.48 2.7249e-05 90737000.0 17003.800000000003 19369.6 19088.1 16512.2 29207.0 22736.0 21197.0 22085.0 31145.0 24858.0 24667.0 True False 19873.625737003298 20355.429905749214 21795.079605608582 20557.689741260823 24910.688990278937 25141.908429064646 25048.220521587773 25215.6163824759 24090.707228345076 19242.560535369226 18541.503125433344 1.0718454486973434 1.0978306218241665 1.1754753354226342 1.1087391136623588 1.3435096832095017 1.3559800550677867 1.3509271795353623 1.35995535053939 1.2992855576687252 1.0378101713325627 1.0 14.178470584877829 -4.357969437497239 13.292101626716098 1.1878368672810828 1.1785929994861115 0.0 0.13714799032176264 0.0 872851.3204748767 0.021512355099178447 9843964.30697352 4.385615594778622e-05 4.357969437497239 -0.009243867794971328 EVPSKEEPS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 EVPSKEEPSPVK 12 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPS(0.002)KEEPS(0.998)PVK;EVPSKEEPS(1)PVK 115.8 7.1176e-06 109096000.0 18445.9 20461.1 19441.9 18057.4 21489.4 18917.9 19384.4 20299.9 17724.8 19131.9 21997.9 True False 20318.51418884613 22185.428705236685 20761.34424764215 19172.764586669116 19980.058678405414 18763.838894609744 20122.083949550703 19895.002569536526 16979.88829565236 17923.908568929528 19292.297756177366 1.053193064177136 1.149963005217092 1.0761467871806196 0.9938040988679031 1.0356495079497634 0.9726077801490282 1.0430112682201187 1.0312406962082148 0.8801382038702685 0.9290706993774404 1.0 14.235737361403274 -6.7839523280214165 0.573899933299985 0.9501200830932985 1.1153541713095763 0.4852840235843534 0.04976682094735496 0.7712547422162885 0.40716521186359994 0.012462547900705523 0.062121838258809015 1.644552233811794e-07 6.7839523280214165 0.16523408821627772 EVPSKEEPS(ph)PVKAEVAEK ddPTM_A549_MK2206_60min_R1 10 EVPSKEEPSPVKAEVAEK 18 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPS(0.011)KEEPS(0.989)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPS(0.075)KEEPS(0.925)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPS(0.007)KEEPS(0.993)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPS(0.02)KEEPS(0.98)PVKAEVAEK 198.55 4.4008999999999996e-49 5110816000.0 83461.3 91018.4 91094.40000000001 84042.3 113846.09999999999 84738.09999999999 85368.40000000001 87114.20000000001 127892.6 121774.3 118944.8 True False 97547.5270071251 95650.84778898103 104012.95569622709 104632.66727280215 97099.48950101694 93705.0294974015 100878.7332535318 99462.90462604865 98925.13030251554 94265.40105407583 89407.52345052286 1.0910438321346283 1.0698299661763158 1.1633579779646477 1.1702892914901588 1.0860326486366747 1.0480664924049354 1.128302511469932 1.112466834864186 1.1064519682983907 1.0543341031724391 1.0 16.44810861574635 -10.668874250765072 0.5819183299290519 0.9839677558971572 1.111350512461875 0.37193379440219754 0.0381404875481027 0.6986143464876311 0.3427811735482354 0.04722848989837898 0.00806548957056576 2.143511161317018e-11 10.668874250765072 0.12738275656471776 EVPSKEEPS(ph)PVKAEVAEK ddPTM_A549_PD325901_60min_R1 4 EVPSKEEPSPVKAEVAEK 18 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPSKEEPS(1)PVKAEVAEK;EVPS(0.001)KEEPS(0.999)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK 166.49 4.0471000000000006e-24 6236720000.0 72716.8 75958.5 78386.4 77898.1 89093.2 80755.1 79837.6 85882.0 84557.0 85564.1 87014.1 True False 80098.95600472116 82359.78937137891 83706.17247971511 82709.6887175789 82835.60098685428 80097.45723986818 82875.86355681105 84169.01613687443 81003.36334488838 80161.56812353944 76311.9173278265 1.0496257833573492 1.0792519996263692 1.096895156232595 1.0838371202530317 1.08548708887765 1.0496061433731179 1.0860146941504125 1.1029603118906686 1.0614772394842082 1.0504462596474327 1.0 16.219620754134805 -10.111430818622926 0.6735970777111782 1.0004495388935248 1.079734545049194 0.401823346276982 0.0217696892436912 0.26429218224696077 0.23213545039817543 0.010462863236185884 0.0037608267979284743 7.736939153109188e-11 10.111430818622926 0.07928500615566914 EVPWS(ph)PSAEK ddPTM_A549_MK2206_60min_R1 2 EVPWSPSAEK 10 0 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EVPWS(0.894)PS(0.106)AEK;EVPWS(0.913)PS(0.087)AEK 146.5 3.7687e-08 79519000.0 22267.3 20889.8 15740.6 12800.1 32227.0 21682.7 20725.3 22292.3 30563.0 30333.0 29765.0 True False 26025.47585678339 21953.001592450026 17972.853769628335 15936.12507461833 27486.450990848745 23977.148922188615 24490.818737371486 25452.301792305527 23640.529299082034 23480.75423281657 22373.529027791126 1.1632262315192217 0.9812042420836362 0.803308845345921 0.7122758798946461 1.2285255024679673 1.071674874911578 1.0946336944408896 1.1376078293545075 1.0566294333682054 1.0494881788049668 1.0 14.44950521347622 -6.768041658249113 24.999999220828265 1.056164828660289 0.9117541926440913 0.3043958623234202 0.1209336666770633 175.82739417210962 665785.3836641896 0.017972129158014688 0.03453315170171091 1.7059187465910105e-07 6.768041658249113 -0.14441063601619764 EVPWS(ph)PSAEK ddPTM_A549_PD325901_60min_R1 2 EVPWSPSAEK 10 0 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EVPWS(0.901)PS(0.099)AEK;EVPWS(0.927)PS(0.073)AEK 134.99 6.9839e-07 89044000.0 19563.4 17582.3 16630.199999999997 17574.1 16943.4 17528.6 15770.8 14705.7 20853.8 20195.7 28639.0 True False 21549.461966186114 19064.02212608722 17758.825377516518 18659.612243323056 15753.354035556787 17385.852893188803 16370.966424112887 14412.383277101528 19977.387307042958 18920.540055380265 25116.584557578855 0.8579774020143844 0.7590212786449385 0.7070557438574125 0.742919969892665 0.6272092449290945 0.6922060940782919 0.6517990687222238 0.5738193918867298 0.7953863018773721 0.7533086360530277 1.0 14.61635267431825 -9.803416926640146 0.91354812657859 0.972462027129189 0.7036912853684596 0.19654674809916073 0.09988032735994169 0.2221807767022336 0.38351662741271386 0.02841755154918533 0.01634787028078985 1.5724725517188185e-10 9.803416926640146 -0.26877074176072946 EVPWSPSAEKAS(ph)PQENGPAVHK ddPTM_A549_MK2206_60min_R1 1 EVPWSPSAEKASPQENGPAVHK 22 1 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EVPWS(0.009)PS(0.039)AEKAS(0.952)PQENGPAVHK 60.521 0.00063163 2672000.0 1058.9 1536.9 921.78 1084.9 1355.3 1139.5 1046.6 846.86 1663.6 1731.0 1944.4 True False 1237.6164323805726 1615.1216453693403 1052.5022647019814 1350.700548703011 1155.9371653550534 1260.081133661117 1236.7536725901668 966.9049983999794 1286.7972562233053 1339.965897768288 1461.5518172900074 0.8467824525546735 1.1050731327227796 0.7201265478589182 0.9241550882591795 0.7908971489621072 0.8621528971839979 0.8461921486186793 0.6615605324160203 0.8804321824246163 0.9168103942102014 1.0 10.513285263461965 -10.046922758657942 1.0728545341806939 0.984660250199961 0.8506210018992277 0.11765976168270786 0.10994689409016677 0.5163767217517397 1.1954634806996276 0.03696770737269856 0.019694285377383047 8.975884206808284e-11 10.046922758657942 -0.13403924830073322 EVPWSPSAEKAS(ph)PQENGPAVHK ddPTM_A549_PD325901_60min_R1 2 EVPWSPSAEKASPQENGPAVHK 22 1 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EVPWS(0.026)PS(0.177)AEKAS(0.796)PQENGPAVHK;EVPWS(0.001)PS(0.057)AEKAS(0.942)PQENGPAVHK 98.29899999999999 1.4835e-07 8972300.0 3208.6000000000004 3760.8 3354.1 3288.0 3762.7 3297.0 3570.0 3009.2 3861.7999999999997 3999.3 4185.2 True False 3534.3347099535245 4077.735814528749 3581.7293958417913 3491.0922924102056 3498.4209326103123 3270.150325116867 3705.8583035789593 2949.179145328268 3699.5019757712485 3746.7835154751942 3670.446932168687 0.9629167170291328 1.1109643838712076 0.975829227893379 0.9511354766672762 0.9531321382007468 0.8909406362632508 1.0096477001478807 0.8034931984660906 1.007915941611338 1.0207976262066276 1.0 11.841740028266143 -4.92657131087653 15.909550104857058 0.9831207482275102 0.6657155257791626 0.0 0.07513969005320065 12407204.772454636 47431760.336511284 0.009950975798212313 132710678.24639672 1.1842099045223686e-05 4.92657131087653 -0.31740522244834757 EVQAEQPS(ph)SSSPRR ddPTM_A549_MK2206_60min_R1 2 EVQAEQPSSSSPRR 14 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 EVQAEQPS(0.25)S(0.25)S(0.25)S(0.25)PRR;EVQAEQPS(0.368)S(0.226)S(0.226)S(0.179)PRR 56.407 0.0058962 37817000.0 1144.66 1586.8200000000002 1203.24 1052.28 1677.8400000000001 1498.3 1235.88 1049.5 1458.9 1941.4 1856.54 True False 1337.8506237498789 1667.5823601437817 1373.877524984282 1310.088647238644 1431.0319586212077 1656.849111508953 1460.4233985101623 1198.2698389589525 1128.4614793845753 1502.8363916391415 1395.5098801026488 0.9586823015910653 1.19496277591465 0.9844986012447468 0.9387885144476931 1.0254545517914542 1.1872715020742677 1.046515986259258 0.8586609496959003 0.8086373987560516 1.0769084569495115 1.0 10.446576623272184 -8.248188446323443 22.825604407359215 0.9032864030679388 1.0515192064960528 0.1918679915270186 0.10268035556105636 223.13207514416365 384359.00077358464 0.016476532870457698 0.021189443701555077 5.646918940977972e-09 8.248188446323443 0.14823280342811396 EVQAEQPS(ph)SSSPRR ddPTM_A549_PD325901_60min_R1 3 EVQAEQPSSSSPRR 14 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 EVQAEQPS(0.31)S(0.23)S(0.23)S(0.23)PRR;EVQAEQPS(0.25)S(0.25)S(0.25)S(0.25)PRR;EVQAEQPS(0.25)S(0.25)S(0.25)S(0.25)PRR 61.815 0.0026638 23557400.0 1696.3700000000001 1590.6100000000001 1620.05 1809.33 2100.81 1859.51 1574.62 1756.6100000000001 2053.3599999999997 1902.3200000000002 2143.7200000000003 True False 1868.5842335984087 1724.65628694628 1729.99633515205 1921.0882048134297 1953.256353001053 1844.366767078576 1634.543025765126 1721.573035516114 1967.0644199517474 1782.207190548038 1880.056030160722 0.9938981624067169 0.917343025568681 0.9201833920897328 1.021824974359514 1.0389351815403465 0.9810169151825252 0.8694118683395794 0.9157030470889426 1.0462796791133864 0.9479542960194015 1.0 10.876559942964187 -8.771028758093635 24.985488243337965 1.021854293736108 0.9574555004265533 0.05750326719558718 0.05367763486979566 214.14385144724383 557958.1535455721 0.009272293716222624 0.0099332242872296 1.6942256085731157e-09 8.771028758093635 -0.06439879330955467 EVQAEQPSS(ph)SSPRR ddPTM_A549_PD325901_60min_R1 1 EVQAEQPSSSSPRR 14 1 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 EVQAEQPS(0.256)S(0.291)S(0.226)S(0.226)PRR 47.754 0.012977 19134000.0 747.02 815.66 750.85 711.22 902.77 678.66 795.43 672.2 880.23 942.83 1029.2 True False 822.8569204729416 884.3985307590185 801.8071962278435 755.1504441021856 839.3625495874262 673.1332179690057 825.7005239259978 658.7924436693019 843.2369941822797 883.299552895626 902.61492463634 0.9116367323578961 0.9798182000096434 0.8883159078616925 0.8366252578932625 0.9299231894770653 0.7457590159393924 0.9147871383344003 0.729870984500646 0.9342156562744811 0.9786006510489552 1.0 9.817966823322712 -9.070908506451955 3.9218040705308543 0.97366516069814 0.8685391552772559 0.2937490710359253 0.07239264204117278 0.18532211397107448 5.93562820075267 0.013285699433542566 0.01317636023634739 8.493593921591949e-10 9.070908506451955 -0.10512600542088413 EVQAEQPSSSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EVQAEQPSSSSPR 13 0 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 EVQAEQPS(0.001)S(0.004)S(0.359)S(0.636)PR;EVQAEQPS(0.001)S(0.009)S(0.136)S(0.854)PR 194.12 7.4018e-27 356540000.0 1382.76 1859.94 1523.51 1421.04 2003.87 1927.69 1335.47 1394.52 2271.0 2172.64 2522.2 True False 1616.1360827637743 1954.6030015539418 1739.5666268481807 1769.1948637929097 1709.1033775105384 2131.67687630294 1578.1076123963217 1592.1974805383882 1756.6221260417938 1681.8391150359867 1895.8681308212585 0.8524517378029299 1.0309804620784675 0.9175567638739881 0.9331845580560099 0.9014885316787213 1.1243803520129498 0.8323931325923558 0.8398250145429021 0.9265529060192885 0.8871076461987057 1.0 10.888642904158553 -10.569540061765387 1.0771819912261398 0.9966720947609476 0.9319278116672803 0.0 0.08762307550007592 0.9449149200430975 2.0876215365119135 0.040669245149304284 0.013824522640771948 2.6943867754976982e-11 10.569540061765387 -0.06474428309366731 EVQAEQPSSSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EVQAEQPSSSSPR 13 0 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 EVQAEQPSSS(0.008)S(0.992)PR;EVQAEQPSSS(0.026)S(0.974)PR 229.9 2.1203999999999997e-46 449050000.0 3420.6 3364.0 3182.7999999999997 3254.7 3828.7 3487.0 3720.8 3619.2 3584.8 3917.7 3241.3 True False 3767.8567938873725 3647.4960859590255 3398.8039477312095 3455.73542703999 3559.7853202979504 3458.603028111164 3862.397080099884 3547.012216792525 3434.1433224778025 3670.3357534011357 2842.6406482935968 1.325477701920984 1.283136540015557 1.1956502309820523 1.215677904667418 1.2522811571117323 1.2166866853843528 1.3587356116990852 1.2477877634381096 1.2080821135584892 1.2911712057605291 1.0 11.473016017271515 -10.205083209424876 0.6043377657475518 0.991147566748282 1.2620354624277772 0.0 0.0965998882765069 0.2830611629905693 0.18930607115609893 0.03789279441422067 0.011349372871169697 6.236153413432582e-11 10.205083209424876 0.2708878956794952 EVQQLSVSFS(ph)SLQIK ddPTM_A549_MK2206_60min_R1 1 EVQQLSVSFSSLQIK 15 0 Q96D42 Q96D42 HAVCR1 Hepatitis A virus cellular receptor 1 1 EVQQLSVS(0.001)FS(0.499)S(0.499)LQIK 94.023 2.3116e-05 2729000.0 1791.7 3600.2 2949.4 2607.6 3572.2 2518.2 2376.5 2618.0 4077.7 3131.8 3898.2 True False 2094.0951571406854 3783.43480230249 3367.6692697954218 3246.4621170596124 3046.734112064727 2784.674252554124 2808.2792880857373 2989.1095172887453 3154.1074607488395 2424.3242048704356 2930.169355153212 0.7146669367276861 1.2912000446829677 1.1493087469066559 1.1079435089136211 1.0397808941338205 0.9503458384262979 0.9584016989143955 1.0201149336409094 1.076424970181943 0.8273665822785431 1.0 11.516768335240954 -6.898320322992617 5.848146320283533 1.0227128673268908 1.0873915385707928 0.019224523852593434 0.14637844220451549 0.5500351950086311 27.193191050825554 0.018013873640156275 0.03440100580635776 1.263803858615321e-07 6.898320322992617 0.06467867124390203 EVQS(ph)PEGMISLR ddPTM_A549_MK2206_60min_R1 2 EVQSPEGMISLR 12 0 A0A0A0MRW6;Q9H6R4-2;Q9H6R4-4;Q9H6R4 A0A0A0MRW6 NOL6 Nucleolar protein 6 1 EVQS(0.977)PEGMIS(0.023)LR;EVQS(0.996)PEGMIS(0.004)LR 80.469 0.00081613 4106200.0 897.29 1281.5 1007.0899999999999 1035.98 1541.8899999999999 1514.2 1075.74 1142.85 1711.03 1579.6100000000001 1400.3 True False 1048.7306153657223 1346.7228762709422 1149.9105054988372 1289.79514650691 1315.0800235293323 1674.4316389553878 1271.188033395898 1304.8524873313372 1323.484436953452 1222.7750039132093 1052.5668636860707 0.9963553400238024 1.2794653933477842 1.0924821454780276 1.2253807249736801 1.2494028350122528 1.5908078590765793 1.2077028806932224 1.239686078242827 1.2573875186595107 1.1617076749224962 1.0 10.039696167212037 -10.612462774166392 0.826703224490703 0.9952514719130272 1.2446016270986153 0.11330854045779526 0.14494728376135416 0.65734751967053 0.77828471728204 0.10208233719427474 0.02578387264994188 2.4408282762567573e-11 10.612462774166392 0.24935015518558812 EVQS(ph)PEGMISLR ddPTM_A549_PD325901_60min_R1 1 EVQSPEGMISLR 12 0 A0A0A0MRW6;Q9H6R4-2;Q9H6R4-4;Q9H6R4 A0A0A0MRW6 NOL6 Nucleolar protein 6 1 EVQS(1)PEGMISLR 123.36 8.5284e-06 5167400.0 1478.0 1415.4 1325.7 1683.4 1580.2 1163.6 1897.8 1498.8 1187.3 1758.5 1496.9 True False 1628.0454719539068 1534.6807253467325 1415.6699740817091 1787.37979472121 1469.2122033940548 1154.12402739035 1970.0218175160066 1468.9052582141464 1137.4019099469695 1647.4680098925119 1312.7907896309146 1.2401408395100217 1.1690215512390982 1.0783667780604391 1.361511528599103 1.119151821446826 0.8791378157938075 1.500636531788793 1.1189180102544158 0.8663999770037578 1.2549356857962801 1.0 10.358421306901475 -8.626058142830377 5.753436486255749 0.9376180751370822 1.18745321792244 0.045378470025282724 0.17923599770189638 0.16444106355785115 7.962146840957473 0.025094573266340802 0.02845687172436481 2.3656029721633556e-09 8.626058142830377 0.2498351427853578 EVQTPQYLNPFDEPEAFVTIKDS(ph)PPQSTKR ddPTM_A549_MK2206_60min_R1 1 EVQTPQYLNPFDEPEAFVTIKDSPPQSTKR 30 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 EVQTPQYLNPFDEPEAFVT(0.17)IKDS(0.596)PPQS(0.117)T(0.117)KR 86.507 6.7302e-08 6478500.0 613.58 843.68 1522.7 953.64 1453.0 1074.5 1014.9 1244.8 1382.0 1249.6 1618.0 True False 717.1373034092661 886.6197083513598 1738.6417566683017 1187.2818428105268 1239.2656247774614 1188.202876804626 1199.2941929216129 1421.2542120401179 1068.97920660051 967.3144921151081 1216.2059454717296 0.5896512067543874 0.7290045831896231 1.429561961230123 0.9762177591970379 1.0189603408794288 0.9769750602096899 0.9860946638083099 1.1685966651715851 0.8789458813127946 0.7953541879290156 1.0 10.248171831990723 -5.539196401056045 24.999742669125283 0.9963815679094108 0.6244892256121469 0.44563151696468284 0.15786416329739858 127.39460632241419 195177.14883046714 0.01990505112069709 0.07713350882130199 2.889372925331271e-06 5.539196401056045 -0.37189234229726387 EVQTPQYLNPFDEPEAFVTIKDS(ph)PPQSTKR ddPTM_A549_PD325901_60min_R1 1 EVQTPQYLNPFDEPEAFVTIKDSPPQSTKR 30 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 EVQTPQYLNPFDEPEAFVT(0.049)IKDS(0.63)PPQS(0.161)T(0.161)KR 70.249 6.0268e-05 9238500.0 1664.9 1430.2 1815.2 1470.2 1948.6 2171.8 2225.2 1909.6 1934.5 1909.3 2038.6 True False 1833.9194223654001 1550.7279732873365 1938.390387684332 1561.0109149335403 1811.7370583050601 2154.113580857996 2309.8812036761624 1871.511529947779 1853.1996924049627 1788.7464721568244 1787.8651237501385 1.0257593808411343 0.8673629529920049 1.084192740232249 0.8731144727848598 1.0133522010345215 1.2048523975564962 1.2919773270318449 1.0467856356089031 1.0365433431118012 1.0004929613509308 1.0 10.804022188612644 -6.997082697827746 24.985521978008993 1.0569118767373809 0.9618319303929115 0.22324520767606104 0.10441860638445392 146.17841730252994 1251930.358135571 0.016230042292127243 0.03055466391797857 1.0067399484006177e-07 6.997082697827746 -0.09507994634446937 EVRS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 EVRSPTK 7 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 EVRS(1)PTK;EVRS(0.957)PT(0.043)K 70.908 0.005831 55508000.0 4186.6 3516.8 2573.1 2303.5299999999997 2848.8999999999996 2505.8900000000003 2477.3 3434.0 3116.5 4304.7 4263.7 True False 4893.1957274572715 3695.790098532693 2938.0042714147266 2867.8949534093913 2429.8305839150084 2771.061616524844 2927.393343309401 3920.780016183939 2410.6177260278505 3332.265280256007 3204.9056178663886 1.5267830978170376 1.153166594962975 0.9167209964113243 0.8948453699920946 0.7581597942758224 0.8646312705987363 0.913410156913845 1.2233683245855245 0.752164966290857 1.0397389744270864 1.0 11.646066155814664 -5.362620184258247 1.8855361048100596 0.8969553738599475 1.649644429456846 0.651151085838778 0.1279212489081851 0.2901686054992265 1.2407776490133915 0.018731951437691102 0.3542038801617757 4.338901746566379e-06 5.362620184258247 0.7526890555968985 EVRS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 EVRSPTK 7 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 EVRS(0.975)PT(0.025)K;EVRS(0.989)PT(0.011)K 70.399 0.005937899999999999 80808000.0 12595.8 13427.5 10054.5 9960.8 11318.599999999999 8932.1 7355.2 8705.9 8730.2 11327.4 13803.7 True False 13874.516343462128 14559.082548815342 10736.858832620166 10576.055993381864 10523.62058305022 8859.359939028318 7635.106160919871 8532.25399485357 8363.300054088293 10612.186030853825 12105.932408863828 1.146092335135075 1.2026403301372595 0.8869088699651717 0.8736258915206064 0.869294510131656 0.73181970952866 0.6306912927524304 0.7047994079833413 0.6908431148983435 0.8766103817896507 1.0 13.563426580723482 -5.841539447387258 3.772002153574575 0.8194421672241672 1.1784119832928222 0.6547281620466578 0.10325998038790796 0.1370258829000935 3.7393328442658214 0.019490735291594487 0.0707973663216672 1.440325178177582e-06 5.841539447387258 0.35896981606865497 EVRS(ph)PTKAPHLQLIEGK ddPTM_A549_MK2206_60min_R1 2 EVRSPTKAPHLQLIEGK 17 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 EVRS(0.777)PT(0.223)KAPHLQLIEGK;EVRS(0.981)PT(0.019)KAPHLQLIEGK 149.93 2.9999e-17 40680000.0 6691.0 7847.0 7657.2 6349.5 8442.0 6472.0 6914.6 5788.4 9847.0 10629.1 10691.6 True False 7820.277220755891 8246.378782753089 8743.106100453482 7905.127785039887 7200.192983049782 7156.862744234095 8170.89331596787 6608.923426231535 7616.670222427798 8227.97892776945 8036.580646851387 0.9730851421020406 1.026105397944821 1.0879136892477899 0.9836431851320995 0.8959274223012632 0.8905357960960731 1.0167126636337687 0.8223551428953572 0.9477501137765469 1.0238158850546781 1.0 12.972366087915757 -6.5147330101005165 24.721472962859742 0.9545420241004045 1.029914586538257 0.2604633361666153 0.062077990368027525 370.68602770116695 1124992.0722536985 0.008715189861820658 0.01883978881176565 3.056799755193399e-07 6.5147330101005165 0.07537256243785262 EVRS(ph)PTKAPHLQLIEGK ddPTM_A549_PD325901_60min_R1 2 EVRSPTKAPHLQLIEGK 17 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 EVRS(0.65)PT(0.35)KAPHLQLIEGK;EVRS(0.931)PT(0.069)KAPHLQLIEGK 128.95 1.1028e-12 44739000.0 12459.900000000001 11442.7 10575.0 12020.8 12772.5 11398.1 11178.2 11622.2 12923.4 12726.099999999999 14937.599999999999 True False 13724.819875506417 12407.016487159139 11292.683092640933 12763.29751478241 11875.403662732926 11305.277652628012 11603.592517945748 11390.386103560475 12380.27444033409 11922.571874150184 13100.369897248149 1.0476665913371987 0.9470737532201549 0.8620125371431736 0.974270010304324 0.9064937674185415 0.8629739267898678 0.8857454109279149 0.8694705716632573 0.9450324332395131 0.9100942925783057 1.0 13.67731992729626 -9.702521877286369 1.1329516074527313 0.9895285465834299 0.9180946181767813 0.0 0.05846288822189522 0.45090445935392315 1.186558276487143 0.015471139211977411 0.010438220838878106 1.9837097263039784e-10 9.702521877286369 -0.07143392840664864 EVRSPT(ph)KAPHLQLIEGK ddPTM_A549_MK2206_60min_R1 2 EVRSPTKAPHLQLIEGK 17 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 EVRS(0.252)PT(0.748)KAPHLQLIEGK;EVRS(0.262)PT(0.738)KAPHLQLIEGK 144.95 9.003899999999999e-17 44747000.0 6320.3 6410.2 5831.3 5583.0 7774.700000000001 6209.799999999999 5950.6 5788.2 8735.9 9315.4 10837.599999999999 True False 7387.012123500737 6736.451799822079 6658.266024600945 6950.835250630391 6631.051929082815 6866.916914268367 7031.746994185983 6608.695075619067 6757.232598365698 7211.044670173725 8146.324817456374 0.9067907662694051 0.8269314016778284 0.8173337270241497 0.8532479868388964 0.8139930677541175 0.8429466131222235 0.8631802870317649 0.8112486579785779 0.8294823432385048 0.8851899269620969 1.0 12.991933624560856 -10.65710061569731 0.7776887855319703 1.0076554506818935 0.8381848152348038 0.3671117756152461 0.04230105971334 0.21249690142494554 0.21294882587327815 0.022174849440475267 0.0049850592240257875 2.202416156526382e-11 10.65710061569731 -0.16947063544708973 EVS(ph)DDEAEEK ddPTM_A549_PD325901_60min_R1 1 EVSDDEAEEK 10 0 G3V2J8;P07900;P07900-2 G3V2J8;P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EVS(1)DDEAEEK 98.182 0.00049984 3439500.0 2150.4 1933.3 2854.8 1869.5 1508.0 1847.7 1904.7 1873.2 1744.9 2271.4 2067.1 True False 2368.7070249591893 2096.225975916939 3048.5438953069797 1984.9747690574434 1402.0832823175767 1832.6529438029836 1977.184400791833 1835.837556503028 1671.5679210532016 2127.98341636045 1812.8598044265236 1.3066134618768832 1.1563089273635558 1.6816214292264866 1.0949411334570167 0.7734096585373346 1.0109181853600209 1.0906438523067654 1.012674864333358 0.9220613292719466 1.1738267962941635 1.0 10.82405164478047 -6.509882681091497 24.94500523429973 0.9674561289173081 1.363875282365126 0.5476461489435747 0.15069442217968615 269.8877293075124 518029.39195344027 0.017967267013567732 0.04002068020002024 3.091130347705166e-07 6.509882681091497 0.39641915344781775 EVS(ph)DSEAGGGPQGER ddPTM_A549_MK2206_60min_R1 2 EVSDSEAGGGPQGER 15 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EVS(0.982)DS(0.018)EAGGGPQGER;EVS(0.998)DS(0.002)EAGGGPQGER 86.291 6.8695e-05 51876000.0 1149.69 1039.19 879.6 615.78 977.4 620.0899999999999 917.72 650.03 1028.95 763.02 1025.61 True False 1343.7295647781852 1092.0803322606314 1004.3405064460742 766.6461276434142 833.6257547539511 685.7075122175711 1084.4578448399084 742.1737431333851 795.89446789551 590.6532520595952 770.9227316039926 1.743014584590602 1.4165885730057977 1.3027771335220968 0.9944526166044158 1.081335029542452 0.8894633458153173 1.4067010873885768 0.9627083398996525 1.0323920092997658 0.7661640107960933 1.0 9.590442458062867 -5.472812826246 1.0650824426449284 1.0314341618097007 1.9403082907791165 0.6900737921209867 0.15266746507182352 0.4418837045409229 0.4982912557325016 0.01801093636437766 0.41371263120109514 3.366566315654835e-06 5.472812826246 0.9088741289694158 EVS(ph)DSEAGGGPQGER ddPTM_A549_PD325901_60min_R1 2 EVSDSEAGGGPQGER 15 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EVS(0.982)DS(0.018)EAGGGPQGER;EVS(0.997)DS(0.003)EAGGGPQGER 143.93 1.5278e-13 58310000.0 1350.1399999999999 1065.85 1122.6100000000001 1508.71 1011.5699999999999 967.42 765.17 834.0999999999999 1140.93 1050.68 1069.62 True False 1487.2052188794637 1155.6729201008995 1198.7970654023293 1601.8995901709861 940.5208129270507 959.5416522670788 794.2889630670903 817.4632211612086 1092.9806797909512 984.3398854898296 938.0635208798316 1.585399267508643 1.2319772535413882 1.2779487089295933 1.7076664367766132 1.0026195369423536 1.022896244133982 0.8467325990057776 0.8714369581225063 1.1651457022503329 1.0493318027830294 1.0 9.873541807777121 -6.788336143421862 24.980491429705 1.0373988702498984 1.4227787103648255 0.6746832821009734 0.15020132309024334 114.03139911600886 105906.89442555365 0.022697749579520796 0.042902712294232176 1.6280354473217223e-07 6.788336143421862 0.3853798401149271 EVS(ph)GHSVR ddPTM_A549_MK2206_60min_R1 2 EVSGHSVR 8 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 EVS(0.998)GHS(0.002)VR;EVS(0.998)GHS(0.002)VR 70.399 0.0020336 58601000.0 1571.23 1380.24 1321.9099999999999 1202.18 1900.1 950.15 774.4 1044.52 1788.92 1796.0 1948.3799999999999 True False 1836.4152111146725 1450.4883205183023 1509.376715411698 1496.7141539679103 1620.5978070472493 1050.6942423414753 915.0984560040378 1192.5839087083414 1383.7324763182223 1390.2823526238271 1464.5434734475944 1.2539164896154822 0.9904030483327302 1.0306124350536106 1.0219663540916166 1.1065549343047474 0.7174209993699256 0.6248352968654861 0.8143042049144167 0.9448217150296402 0.9492940140254399 1.0 10.516235303414616 -2.000005349321729 0.6978722448542218 0.9286442839000832 39.495733681338216 0.3611332684336631 0.13438575412164505 272.7622109447702 1.3559086972459402 0.024101178379246708 16434.14115715161 0.00999987682807386 2.000005349321729 38.56708939743813 EVS(ph)GHSVR ddPTM_A549_PD325901_60min_R1 2 EVSGHSVR 8 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 EVS(0.997)GHS(0.003)VR;EVS(0.998)GHS(0.002)VR 75.197 0.0015014000000000002 60378000.0 1424.56 1699.74 1521.87 1519.67 1695.53 1812.25 1728.4099999999999 1707.4499999999998 1699.1399999999999 1244.8600000000001 1872.13 True False 1569.1802824943557 1842.9830550380484 1625.1532499477498 1613.5365644790186 1576.4418220609566 1797.491636849573 1794.1855883722435 1673.3935702813862 1627.731054718515 1166.2593271508629 1641.869878409864 0.9557275537657665 1.1224903259830559 0.989818542454592 0.9827432646743688 0.9601502791364479 1.094783247129442 1.0927696597430094 1.0191998722225495 0.9913885845174026 0.7103238462967445 1.0 10.681124079736737 -8.635352981007607 5.333334794346716 0.9960291741072876 1.030416779776181 0.06378349475378386 0.10119028890935389 0.424206064260597 18.422573028663592 0.008890038731764605 0.010076865654861631 2.315511909105436e-09 8.635352981007607 0.03438760566889332 EVS(ph)PAPAVAGQSK ddPTM_A549_MK2206_60min_R1 2 EVSPAPAVAGQSK 13 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK 220.06 2.5018e-38 233320000.0 20226.8 22757.7 21685.3 19673.0 29603.0 23590.1 21827.0 21612.1 32421.0 32165.0 30749.0 True False 23640.58934221869 23915.969724004077 24760.601619412304 24492.88588315452 25248.437914856964 26086.388724158944 25792.683366735695 24675.68135928041 25077.69526569836 24898.904160437312 23113.17467077269 1.022818789671197 1.0347332231364368 1.0712765326315314 1.0596937128730533 1.092382949313509 1.1286371991618258 1.1159299288881905 1.0676024263548511 1.0849957058218345 1.0772602429177647 1.0 14.49642781188728 -4.308282553911276 12.808120659296794 1.0570500435755577 1.068115834727001 0.0 0.03846444593861922 0.0 0.0 0.006272845002547545 0.0 4.917195166968903e-05 4.308282553911276 0.01106579115144335 EVS(ph)PAPAVAGQSK ddPTM_A549_PD325901_60min_R1 2 EVSPAPAVAGQSK 13 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK 252.52 1.0014999999999998e-68 547100000.0 27922.0 27241.0 28602.0 28655.0 35539.0 32987.0 29102.0 30785.0 35205.0 30065.0 32064.0 True False 30756.62088491002 29536.694672297806 30543.103717798193 30424.954269773232 33042.863242894135 32718.364808804985 30209.49253522544 30170.969024634687 33725.4562786853 28166.690769075 28120.331270442686 1.0937503043301036 1.0503679486643838 1.0861573224033134 1.081955755683182 1.1750524175945796 1.163512779922166 1.0742936221017665 1.0729236698696871 1.1993264216675201 1.0016486113974428 1.0 14.779325969671483 -6.544977486981725 24.93833597489091 1.1039437229332498 1.0757755814270467 0.01879313344080147 0.061709846562228325 812.840962762818 917284.6190496625 0.010928073121718162 0.022749303227256313 2.8511660628194775e-07 6.544977486981725 -0.02816814150620317 EVS(ph)PEVVR ddPTM_A549_MK2206_60min_R1 2 EVSPEVVR 8 0 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 EVS(1)PEVVR;EVS(1)PEVVR 110.14 0.0016179999999999999 451020000.0 3567.5 3534.2 3382.5 2885.4 3537.8999999999996 3462.0 3146.2 3142.3 4624.8 4371.1 4600.9 True False 4169.606782999051 3714.0756842112846 3862.1893622713137 3592.3231295305272 3017.47959662779 3828.346542110388 3717.82381492756 3587.7306478901523 3577.290184288018 3383.665474139207 3458.3695516198272 1.205656804677249 1.0739383483386529 1.1167659513027883 1.0387331590540863 0.8725150830727348 1.1069801780776352 1.075022133822052 1.0374052264627807 1.0343863288446113 0.9783990471910007 1.0 11.755876324204108 -4.986364515652268 0.908057215617441 1.0209916160101589 1.3775093474725597 0.43850961133047084 0.060951051945759754 2.223662162490827 0.9809840869822619 0.008877236842727801 0.8798775727703058 1.0318949435530838e-05 4.986364515652268 0.35651773146240084 EVS(ph)PEVVR ddPTM_A549_PD325901_60min_R1 2 EVSPEVVR 8 0 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 EVS(1)PEVVR;EVS(1)PEVVR 103.55 0.0021314 529080000.0 1779.73 1864.9499999999998 1235.87 1164.11 1676.82 1576.13 1809.04 1774.73 1599.6999999999998 1942.5700000000002 1694.04 True False 1960.4068794320199 2022.1158815425938 1319.7435700900378 1236.014430814369 1559.0459479149597 1563.2945198442358 1877.8840071446718 1739.3316179012484 1532.4701721066003 1819.9157986789298 1485.6838194043394 1.3195316889282762 1.3610674459343093 0.8883071571844724 0.831949850076397 1.049379368310031 1.052239042672628 1.2639863089426246 1.1707279807345583 1.0314914600880685 1.2249684454452734 1.0 10.536911401404888 -5.747425220028403 24.98709278599354 1.0284149667706008 1.3402997908426213 0.41424825246687735 0.12623769550332717 140.80731984389726 251053.47485496232 0.01618412300075391 0.06204786393463022 1.7888535203554103e-06 5.747425220028403 0.31188482407202045 EVS(ph)PGAGTEVQDALER ddPTM_A549_MK2206_60min_R1 2 EVSPGAGTEVQDALER 16 0 Q6SZW1 Q6SZW1 SARM1 Sterile alpha and TIR motif-containing protein 1 1 EVS(0.959)PGAGT(0.041)EVQDALER;EVS(1)PGAGTEVQDALER 126.77 5.7603000000000005e-09 5922800.0 1384.61 1504.3899999999999 1322.65 1113.3899999999999 1738.7399999999998 1860.09 1377.24 1533.5 2063.5 1934.08 1717.6399999999999 True False 1618.2983175356167 1580.9570252307785 1510.221658538995 1386.1705999819758 1482.9736492949494 2056.9234891721885 1627.4666807166843 1750.8783211467874 1596.1205447323819 1497.1699847231034 1291.1025835476287 1.253423498765633 1.2245014806543892 1.169714690206321 1.0736332013008012 1.148610240729367 1.5931526397540576 1.260524687546369 1.3561109267830673 1.2362461086141117 1.1596057538737572 1.0 10.334387918069236 -10.347970365232023 0.8660942733109969 1.009221387341331 1.2560148126670074 0.17586874305666944 0.13454751244501054 0.5082822017261591 0.7257501150850363 0.07209493552443927 0.025545182012662437 4.487760118263336e-11 10.347970365232023 0.2467934253256765 EVS(ph)PGAGTEVQDALER ddPTM_A549_PD325901_60min_R1 2 EVSPGAGTEVQDALER 16 0 Q6SZW1 Q6SZW1 SARM1 Sterile alpha and TIR motif-containing protein 1 1 EVS(0.998)PGAGT(0.002)EVQDALER;EVS(0.985)PGAGT(0.015)EVQDALER 71.344 0.0011524 7673800.0 946.36 908.87 1072.65 1261.36 1296.75 1142.03 1289.61 882.94 1217.04 1091.23 1260.9299999999998 True False 1042.4337705265896 985.4636645795423 1145.4464793684435 1339.2713424435942 1205.6707535446405 1132.7296863188399 1338.6868142516703 865.3290690469694 1165.8920411706044 1022.3295515695231 1105.8436036938404 0.942659311899582 0.8911419854379101 1.0358123658194685 1.211085670677153 1.090272394321718 1.0243127351238386 1.210557089429342 0.7825058318884495 1.0543010216600113 0.9244793279579898 1.0 10.110931648417514 -5.7706628847170585 22.96132721583268 1.0393298645963278 0.9169006509021886 0.14074022351361348 0.11437540930075997 82.85780223537365 206276.93527122127 0.014364788640551079 0.04571637866716888 1.6956535180914108e-06 5.7706628847170585 -0.12242921369413917 EVS(ph)PGSR ddPTM_A549_MK2206_60min_R1 2 EVSPGSR 7 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVS(0.989)PGS(0.011)R;EVS(1)PGSR 114.64 0.0026456999999999995 59221000.0 2911.7 2679.3 2317.7 1699.8 1782.6 1826.0 1590.5 1991.7 1790.7 4130.7 3815.5 True False 3403.123775769681 2815.664925784421 2646.384710993711 2116.2510763069217 1520.38190139594 2019.2261079992982 1879.473262234532 2274.029574325436 1385.109309160299 3197.5720011042577 2868.006047557099 1.1865817991103549 0.9817499960234529 0.9227263356881134 0.7378823618972127 0.5301180946570758 0.7040522490247982 0.6553240234048404 0.7928956691923302 0.4829520182986026 1.1149111780387895 1.0 11.48583235081189 -5.749925526820254 1.5139181282705882 0.7263403767007677 1.1768590693455372 0.35589558361153084 0.1770635553344526 0.44840489814086254 1.6455439597450654 0.02785783574700585 0.22929952831461586 1.7785843770216194e-06 5.749925526820254 0.4505186926447695 EVS(ph)PGSR ddPTM_A549_PD325901_60min_R1 2 EVSPGSR 7 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVS(0.993)PGS(0.007)R;EVS(1)PGSR 131.22 0.0056834 193592000.0 5784.799999999999 5566.3 5894.4 4787.6 6344.8 4686.5 4284.0 4366.0 4918.299999999999 6240.200000000001 6193.1 True False 6372.068637455322 6035.391635931549 6294.429429906636 5083.319178571499 5899.163136371725 4648.334697804124 4447.029964294753 4278.916704939261 4711.600954848966 5846.192707040809 5431.387961295493 1.1731934236447836 1.1112061371679274 1.1588988808682505 0.9359153157159164 1.0861244268333685 0.8558281475984647 0.8187649263843139 0.7878127534676522 0.8674764145784121 1.076371776183408 1.0 12.407105202582034 -6.461010117499861 1.2021512230055078 0.9122217405969291 1.1593002641622978 0.5236403582195455 0.09299213634158682 0.3038205154439675 0.8170842488592419 0.014063002727843152 0.05371458307729927 3.459313187763662e-07 6.461010117499861 0.24707852356536875 EVS(ph)PGSRDILDGVR ddPTM_A549_MK2206_60min_R1 2 EVSPGSRDILDGVR 14 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVS(0.88)PGS(0.12)RDILDGVR;EVS(0.833)PGS(0.167)RDILDGVR 64.507 0.0014262 35947000.0 466.35 752.1 763.28 745.31 604.87 451.0 373.29999999999995 403.3 1258.76 802.08 1090.18 True False 545.0584788371706 790.378677521167 871.524581355343 927.9109834582376 515.8944242664438 498.7245206504289 441.12377792653285 460.4690100544504 973.65286982667 620.8895709312475 819.4582185626515 0.6651449292841503 0.9645136989503984 1.0635375442130741 1.1323469121901233 0.6295554948137984 0.6086027442926902 0.5383114940262288 0.5619188381100425 1.1881665810057764 0.7576830116126019 1.0 9.678526582773502 -8.77570256561896 24.994261494315033 1.088856451469868 0.7809554110758801 0.10403761448503779 0.2210201272485861 219.75232738684872 385084.20749909343 0.03864587114037957 0.04123499591643677 1.6760903836577922e-09 8.77570256561896 -0.3079010403939879 EVS(ph)PGSRDILDGVR ddPTM_A549_PD325901_60min_R1 1 EVSPGSRDILDGVR 14 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVS(0.798)PGS(0.202)RDILDGVR 123.14 3.7921e-07 27190000.0 1366.5 1411.1 1316.5 1484.4 2096.6 2135.9 1936.7 2361.4 1990.5 1833.8 1588.8 True False 1505.2260740358693 1530.0183492558801 1405.8456067576146 1576.0880166830004 1949.3420488773413 2118.5059385553886 2010.402178302905 2314.300024517538 1906.8462071502076 1718.0135550417333 1393.387672233014 1.0802636653327249 1.0980564703891091 1.0089407526511527 1.131119535568443 1.3989947576853228 1.520399513195287 1.4428161080836006 1.660916104423896 1.3684965391536268 1.2329759974756205 1.0 10.444380989117287 -6.568523012149083 7.688072251590826 1.2753762683038357 1.0665188428977719 0.31288835269656334 0.1765376512240038 0.34758934877041925 49.9226990267844 0.034013539971430716 0.07123718338447957 2.700704001165161e-07 6.568523012149083 -0.20885742540606378 EVS(ph)PLLPK ddPTM_A549_MK2206_60min_R1 4 EVSPLLPK 8 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK 93.111 0.0025683000000000004 36183700.0 4668.96 5398.1 4574.71 4513.0599999999995 6365.5 4740.31 5159.900000000001 5621.4 7271.0 6958.799999999999 7039.299999999999 True False 5456.966302887527 5672.840232850701 5223.472667398728 5618.759902598964 5429.1433823268635 5241.926457836886 6097.387039172561 6418.250664815488 5624.1301094010905 5386.802246903503 5291.247535203426 1.031319413159477 1.0721177180066674 0.9871911364278873 1.0618970035358488 1.0260611219199247 0.9906787431435781 1.1523533908791403 1.212993839754037 1.0629119261540778 1.0180590136946603 1.0 12.369392196162197 -4.1823297270157695 13.847985785454359 1.04764094590372 0.3142682341102696 0.0 0.06749917825086024 0.0 0.0 0.009349409486507787 0.0 6.571587169014891e-05 4.1823297270157695 -0.7333727117934503 EVS(ph)PLLPK ddPTM_A549_PD325901_60min_R1 2 EVSPLLPK 8 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 EVS(1)PLLPK;EVS(1)PLLPK 113.62 0.0013464 56572000.0 5436.700000000001 5129.799999999999 4863.3 5959.0 6973.0 5399.799999999999 5349.200000000001 5837.5 4999.6 5597.5 6022.0 True False 5988.629781712998 5562.106249034663 5193.35278339864 6327.073896129079 6483.240535544077 5355.825819097985 5552.766733194554 5721.066483069841 4789.484198577335 5244.0728947246735 5281.332176603226 1.1339240898808 1.0531634941796109 0.9833414391932508 1.1980071854140482 1.2275767398735895 1.0141050856116895 1.0513950926612432 1.083262005070364 0.9068704710139571 0.9929450978214144 1.0 12.366686169200952 -8.722363145477724 10.389387457200572 0.9560381301059434 1.0921523588636965 0.37266581334290916 0.07273369851084806 0.35318137356235874 91.67130396126953 0.01316358428483731 0.014900279229228446 1.895120609131493e-09 8.722363145477724 0.13611422875775314 EVS(ph)PPGAR ddPTM_A549_MK2206_60min_R1 2 EVSPPGAR 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EVS(1)PPGAR;EVS(1)PPGAR 119.07 0.0012299000000000001 152723000.0 13864.7 15716.599999999999 13877.5 12864.3 17906.2 13729.5 12651.0 12439.4 19157.8 20433.8 20042.8 True False 16204.72240062982 16516.507808973758 15845.53817440359 16016.054077500361 15272.221700199703 15182.346577095486 14949.522942803567 14202.723044064789 14818.588888720156 15817.790388109564 15065.619606860804 1.0756094222138912 1.0963045822192554 1.0517681043259326 1.0630863180832426 1.0137134813389828 1.0077479037225607 0.9922939336657374 0.9427241238453242 0.9836030163652777 1.0499263090982482 1.0 13.87897238772001 -6.780872246432883 1.1723562328254415 0.9878653006705954 1.0819232747241248 0.6597543675929403 0.025508619522873553 0.14469003259790092 0.3895623073514014 0.0029061463996796883 0.008485618997755528 1.6562571021353387e-07 6.780872246432883 0.09405797405352934 EVS(ph)PPGAR ddPTM_A549_PD325901_60min_R1 2 EVSPPGAR 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EVS(1)PPGAR;EVS(1)PPGAR 116.37 0.0012862 197126000.0 14528.5 14560.7 14398.0 14771.900000000001 17473.9 16336.9 13848.8 16206.3 16236.0 17150.3 16189.8 True False 16003.422624683577 15787.781289781089 15375.13486220747 15684.326713580998 16246.593545682434 16203.857702881933 14375.823662354136 15883.052632903606 15553.657382210902 16067.42713111149 14198.557235597971 1.1271161118089188 1.1119285592059092 1.0828659987832874 1.1046422853624855 1.1442425646564793 1.14123269244965 1.0124848196767295 1.1186384904715774 1.0954392847193999 1.1316239294248838 1.0 13.793456719504968 -11.422928128003388 0.31251546465845886 0.9227619208538512 1.1147806800114721 0.0 0.05193426292643647 2.8716952985292674 0.24867362732259504 0.20204663504477854 0.01395016779728728 3.776346810420088e-12 11.422928128003388 0.1920187591576209 EVS(ph)PSDVR ddPTM_A549_MK2206_60min_R1 2 EVSPSDVR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 EVS(0.863)PS(0.137)DVR;EVS(0.967)PS(0.033)DVR 137.05 0.0010683 165333000.0 5566.1 5533.4 5142.0 4916.2 8345.6 7081.1 6950.1 6784.299999999999 9071.3 7126.1 6612.7 True False 6505.521601920395 5815.026424937673 5871.212919674529 6120.669220696603 7117.973295349471 7830.417301946239 8212.84320644843 7745.995301047375 7016.66503388944 5516.30906070861 4970.584088764469 1.3088042543381382 1.169887949000196 1.1811917502705256 1.2313782668986109 1.4320194907151798 1.5753515406058918 1.6522893607237785 1.5583672185642041 1.4116379299869288 1.109790914347008 1.0 12.279199676178377 -10.561783826042394 0.9610514971209991 1.0103242683828932 1.389969320676631 0.40222606743487554 0.15614239775192937 0.4284591320913332 0.7338929989252986 0.10457467437712789 0.03240696253053003 2.7429391546484494e-11 10.561783826042394 0.3796450522937378 EVS(ph)PSDVR ddPTM_A549_PD325901_60min_R1 1 EVSPSDVR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 EVS(0.762)PS(0.238)DVR 118.67 0.0012382 84765000.0 3334.1 3573.2 3147.0 3253.4 3921.4 2907.6 3118.6 3134.7 4534.6 3853.0 3294.3 True False 3672.5753775653075 3874.326104146491 3360.5743444483223 3454.355128992506 3645.9743920955875 2883.9214696117074 3237.2800295634 3072.1759493754225 4344.0265314962735 3609.7209224429075 2889.1219842882806 1.2711735252224132 1.3410046807355247 1.1631818811126389 1.1956418412853784 1.2619662346980318 0.998199967081745 1.1205065231473383 1.0633597217710544 1.5035801724953475 1.2494179692215877 1.0 11.49641540321068 -5.760178186944908 24.990862390412385 1.201878098056453 1.3060891086221176 0.09318323901923342 0.13781327502292617 90.70500931297427 1797117.5875663336 0.02621497452503142 0.0914793962550822 1.7370879716485447e-06 5.760178186944908 0.10421101056566462 EVS(ph)SLKNK ddPTM_A549_MK2206_60min_R1 1 EVSSLKNK 8 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 EVS(0.5)S(0.5)LKNK 53.683 0.006839399999999999 16263000.0 3447.9 4002.8 4635.6 3485.0 5314.5 4232.8 3304.9 3438.3 5801.4 6197.1 7188.8 True False 4029.82122693831 4206.5254226588595 5292.997784994797 4338.825156447592 4532.744090075578 4680.712086494758 3905.3575506814886 3925.6895543521355 4487.392162932126 4797.170805927128 5403.622559213334 0.7457628993844782 0.7784639612710571 0.9795276644498572 0.8029474873387981 0.8388343264921635 0.8662174375066237 0.7227295222577566 0.7264921839625382 0.8304414517777506 0.8877694090139238 1.0 12.399711191196822 -10.327238583340328 0.8539993660626218 0.993497173559581 0.812986314080741 0.27822000174496364 0.07619122340393998 0.38189176331567953 0.5312060616497062 0.03917982639258888 0.013998922227984519 4.707186620825109e-11 10.327238583340328 -0.18051085947884005 EVS(ph)SRPSTPGLSVVSGISATSEDIPNKIEDLR ddPTM_A549_PD325901_60min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.494)S(0.494)RPS(0.005)T(0.005)PGLS(0.002)VVSGISATSEDIPNKIEDLR 103.75 7.5468e-15 12591000.0 1030.8 1312.5 1080.8 1163.7 994.71 1360.2 999.11 1230.8 1347.2 1242.3 810.37 True False 1135.4460571651468 1423.10898121915 1154.1495873783747 1235.5791060455454 924.8450011632077 1349.1229821728734 1037.1316777839702 1206.2507284560793 1290.5818690141975 1163.8609659877554 710.6996273586775 1.5976454938987992 2.002405694946189 1.6239625616067699 1.738539121847563 1.3013162882896163 1.8983026446586202 1.4593108506873442 1.6972722118050385 1.8159315403198653 1.6376270947450144 1.0 9.473096132625553 -10.802395673678268 0.8932968296789481 0.9705835142939654 1.6882823145512451 0.051117723514725655 0.26179189592074653 0.30479825391826204 0.4022811249640625 0.1504949232142955 0.03193088797012082 1.5761746063019222e-11 10.802395673678268 0.7176988002572797 EVSPGS(ph)RDILDGVR ddPTM_A549_PD325901_60min_R1 1 EVSPGSRDILDGVR 14 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVS(0.409)PGS(0.591)RDILDGVR 127.32 3.5354e-09 27582000.0 1880.9 1433.5 1764.3 2049.1 1935.6 2330.3 2546.9 2296.5 2215.0 2505.9 2412.4 True False 2071.847583354603 1554.3060758686881 1884.0360075977678 2175.668253156249 1799.6501334574957 2311.3228094085025 2643.823673217158 2250.694505930602 2121.9112528699893 2347.6770463404305 2115.690093463571 0.9792774422660392 0.7346567820451209 0.8905066074745546 1.028349218005974 0.8506208631488698 1.0924675672251523 1.2496270986876845 1.0638110528967015 1.0029404870900698 1.109650725119706 1.0 11.04691260144894 -6.183311863119347 3.8756147391396403 1.0210536602605584 0.8477818229372147 0.33938187287593136 0.10763580643535604 0.21006406575536263 6.015705165297384 0.014731997280455501 0.04138913231028788 6.556742631818053e-07 6.183311863119347 -0.17327183732334372 EVSPS(ph)DVR ddPTM_A549_PD325901_60min_R1 1 EVSPSDVR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 EVS(0.269)PS(0.731)DVR 126.07 0.0010838 80016000.0 4111.3 3433.4 4064.6 3873.5 5638.3 4338.4 3840.0 3553.6 5816.2 4664.0 4193.7 True False 4528.676149420907 3722.744667518347 4340.448198425373 4112.757297643227 5242.28525907904 4303.069508791936 3986.1333013286257 3482.720660254728 5571.765340380329 4369.514244036782 3677.9014860546245 1.2313206774548302 1.0121925999469406 1.1801425935096155 1.1182347632848324 1.4253468394833404 1.1699795454303874 1.0838064359370998 0.9469314698776036 1.5149305552382533 1.1880454820784412 1.0 11.844667121811645 EVSS(ph)LK ddPTM_A549_MK2206_60min_R1 2 EVSSLK 6 0 P35579;P35579-2 P35579 MYH9 Myosin-9 1 EVS(0.112)S(0.888)LK;EVS(0.013)S(0.987)LK 104.37 0.029516000000000004 20953300.0 4491.8 4727.5 4639.200000000001 3382.3 6010.2 5827.5 5067.0 5406.7 6511.3 6875.799999999999 7925.3 True False 5249.906026033671 4968.109557214884 5297.10831912759 4210.963651837217 5126.107541663795 6444.162182018571 5987.608311689639 6173.116282324317 5036.500946409479 5322.552004549507 5957.229282847406 0.8812664036869751 0.8339631263680778 0.8891899350557992 0.7068661372429974 0.8604851850210548 1.0817381497423957 1.0050995231843272 1.0362394981335556 0.8454435287409583 0.8934609953447118 1.0 12.540425771502703 -7.017312975714961 24.703210181329442 0.9514155507498029 0.8265225733359827 0.4452285161438949 0.07705217188843348 592.3972153997413 845269.400525134 0.012940976284961775 0.022757044157685785 9.60919539045351e-08 7.017312975714961 -0.12489297741382022 EVSS(ph)LK ddPTM_A549_PD325901_60min_R1 2 EVSSLK 6 0 P35579;P35579-2 P35579 MYH9 Myosin-9 1 EVS(0.237)S(0.763)LK;EVS(0.026)S(0.974)LK 95.90899999999999 0.035231 46576000.0 10134.6 12823.7 12018.3 12692.900000000001 17362.3 15363.4 9268.6 8908.9 8533.2 11604.9 11850.6 True False 11163.4571313018 13904.398203779063 12833.93410990889 13476.911605332563 16142.831944683328 15238.285564119033 9621.321644972535 8731.205000603157 8174.579279002341 10872.164633495371 10393.051327142839 1.074127008508747 1.3378552425182269 1.2348571854342103 1.2967232799222124 1.5532331590169455 1.4661993946207326 0.9257456104200286 0.8401002483072946 0.7865427603203823 1.046099388069148 1.0 13.343331661150179 -7.801637371876924 9.084338245813935 0.8927133739242952 1.332224648435372 0.6980069964561999 0.13290187795772607 0.12888492781463337 27.353375319225965 0.02185521554301358 0.03030950923052374 1.5789290969914038e-08 7.801637371876924 0.43951127451107674 EVSS(ph)LKNK ddPTM_A549_MK2206_60min_R1 1 EVSSLKNK 8 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 EVS(0.437)S(0.563)LKNK 60.518 0.0031414000000000004 19304000.0 3205.5 3325.1 3465.7 2637.3 4170.7 3136.8 2593.6 2516.4 4779.0 4501.7 5270.0 True False 3746.5100330493206 3494.3333873495944 3957.1883733403374 3283.438618392897 3557.1955548928822 3468.734093960679 3064.8235478978186 2873.107406151794 3696.5641304948185 3484.762843433567 3961.31355539927 0.9457746731365982 0.8821148183502965 0.9989586327865134 0.8288762231198715 0.8979838392354538 0.8756524939139934 0.7736887032637102 0.7252915897646498 0.9331662537686273 0.8796988157334417 1.0 11.951763186085323 -9.056707137036234 4.205759236001054 0.9728746203120296 0.8662954560497624 0.10983579081964767 0.0771546525451174 0.18704428945026705 6.942776950587662 0.014031821167533246 0.013982954065337717 8.775924189861672e-10 9.056707137036234 -0.10657916426226721 EVSS(ph)LKNK ddPTM_A549_PD325901_60min_R1 1 EVSSLKNK 8 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 EVS(0.147)S(0.853)LKNK 42.336000000000006 0.022352 42899000.0 2617.3 3588.9 2656.1 3029.1 3519.7 3809.6 2799.7 2725.6 2560.3 2413.6 3223.0 True False 2883.0063692455747 3891.3491982456435 2836.358918426815 3216.2006274147657 3272.4884143058216 3778.575880668856 2906.244115554625 2671.2357698081655 2452.6994946830832 2261.204884092446 2826.5914322803387 1.0199586457105063 1.3766931979647008 1.003455570562809 1.1378371103389753 1.1577507725146388 1.33679591522023 1.0281797653402023 0.9450378074814864 0.867723388202723 0.7999758501596497 1.0 11.46484764953582 -7.991043813944115 23.177448158206737 0.9387464606570578 1.1724244943577256 0.5307000100046689 0.116792255744326 49.981316532309755 129343.24839233294 0.01667444155794432 0.02301473035295774 1.0208364910815855e-08 7.991043813944115 0.23367803370066775 EVSS(ph)RPST(ph)PGLSVVSGISATSEDIPNKIEDLR ddPTM_A549_MK2206_60min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.104)S(0.895)RPS(0.028)T(0.973)PGLSVVSGISATSEDIPNKIEDLR 183.92 4.0146e-76 40847000.0 3854.6 4347.4 3980.7 3336.7 7732.7 6042.3 5544.6 4702.0 8662.5 5617.1 6192.5 True False 4505.162244077964 4568.664090753253 4545.2231173372975 4154.191649790155 6595.230073445751 6681.692175445868 6551.982049535101 5368.522899271079 6700.457581169979 4348.193208754625 4654.731345694491 0.9678672966260716 0.9815097266524633 0.9764737811434625 0.8924664693339771 1.4168873740793166 1.4354624744618751 1.4075961775099048 1.153347529763845 1.4394939435909084 0.9341448272361828 1.0 12.18448218769447 -6.749371365076858 24.999892554030417 1.2528303463752366 0.9580667620597406 0.4342506946944845 0.16507117334469004 194.01966438066611 401925.2013575629 0.026642494339428068 0.05512970284266922 1.7808553073644783e-07 6.749371365076858 -0.294763584315496 EVSS(ph)RPST(ph)PGLSVVSGISATSEDIPNKIEDLR ddPTM_A549_PD325901_60min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.445)S(0.493)RPS(0.361)T(0.697)PGLS(0.004)VVSGISATSEDIPNKIEDLR 74.377 9.6188e-06 53920000.0 2495.4 2419.4 1635.2 2309.3 1962.0 1666.3 2154.8 2253.3 2137.1 1939.0 1962.0 True False 2748.7311709836126 2623.29132888504 1746.1745052564022 2451.9402161991757 1824.1958885325514 1652.7302052600037 2236.8020931518054 2208.356163820347 2047.2851189654402 1816.57120908819 1720.6864381427326 1.5974619838060249 1.5245609372713818 1.014812732028725 1.4249779401096114 1.0601559052801883 0.9605063238854377 1.2999475346398124 1.2834158013147319 1.1898072034409886 1.0557247205649816 1.0 10.748768502695514 -2.000000010396737 0.49395355268755525 1.1060168110527409 17.57226389005423 0.4862494991984617 0.15265314618779835 54.372833718827785 0.5246196022615992 0.028801582761738876 932.777371795303 0.00999999976060629 2.000000010396737 16.46624707900149 EVSS(ph)RPSTPGLSVVSGISATSEDIPNKIEDLR ddPTM_A549_PD325901_60min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.152)S(0.834)RPS(0.007)T(0.007)PGLSVVSGISATSEDIPNKIEDLR 157.45 2.8903e-51 12363000.0 1864.1 1605.8 1785.1 2000.4 2060.4 2007.0 2151.0 2104.6 1440.9 1787.1 2172.6 True False 2053.3420597221098 1741.1264015555894 1906.2476206783276 2123.9601647619743 1915.6846119941213 1990.6556574187289 2232.857482072365 2062.622101973239 1380.3439838647253 1674.2622010116067 1905.3839732461256 1.0776526351399471 0.91379292888105 1.0004532668713124 1.1147150362262517 1.0054060697962348 1.0447530184833713 1.1718674626344927 1.082523066707249 0.7244439982945218 0.8787006842296642 1.0 10.895866043786246 -8.735920779560576 24.9975957076497 0.8698763046956384 1.0494826413829157 0.4727173541947397 0.08637123356916634 186.74483940649853 182932.08175071448 0.019463658520542364 0.022065770143267136 1.8368733801750172e-09 8.735920779560576 0.17960633668727732 EVSSLEGS(ph)PPPCLGQEEAVCTK ddPTM_A549_MK2206_60min_R1 3 EVSSLEGSPPPCLGQEEAVCTK 22 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 EVS(0.002)S(0.011)LEGS(0.987)PPPCLGQEEAVCTK;EVS(0.001)S(0.004)LEGS(0.995)PPPCLGQEEAVCTK;EVS(0.001)S(0.005)LEGS(0.994)PPPCLGQEEAVCTK 137.62 8.7611e-23 23754400.0 6977.879999999999 8761.9 5917.0 6154.98 10897.2 8595.5 7426.72 7856.4 11208.8 9988.1 11455.900000000001 True False 8155.575551213289 9207.843284899232 6756.119573262189 7662.95037630755 9294.236315433556 9505.070104768878 8776.058890979211 8970.068759215921 8670.02469677554 7731.781272963287 8611.083863244496 0.9471020931551375 1.0693013134156018 0.7845841104973991 0.8898938273050674 1.0793340841917733 1.1038180855885364 1.0191584509400604 1.0416887004786604 1.006844763617113 0.89788711801607 1.0 13.071979123412488 -6.751705288202031 24.998281458409508 1.0196128655638954 0.9233235271617607 0.26423179554626863 0.07905732258813798 204.04335005079326 524003.16286582244 0.0101487401959213 0.020922467598026476 1.77131056013034e-07 6.751705288202031 -0.09628933840213472 EVSSRPSTPGLS(ph)VVSGISATSEDIPNKIEDLR ddPTM_A549_MK2206_60min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.195)S(0.195)RPS(0.195)T(0.195)PGLS(0.219)VVS(0.002)GISATSEDIPNKIEDLR 43.302 0.0084681 3868900.0 729.58 897.81 616.53 576.19 1009.4 809.85 721.13 822.13 1165.0 953.97 1201.3 True False 852.715267481555 943.5046941434368 703.9632246921308 717.3565758661524 860.9185971440945 895.5477894650775 852.1499865420859 938.6694451675302 901.1293601227168 738.4675144390604 902.9840558066678 0.9443303699529823 1.0448741459787687 0.7795965168656885 0.794428839859539 0.9534150593334733 0.99176478666066 0.9437043556442755 1.0395194014018148 0.9979460371730549 0.8178079221779405 1.0 9.818556703713714 -6.993589656570269 24.97212630545701 0.9963279612569297 0.8913752503175448 0.08330842545040307 0.08780159490190377 149.73993057846596 583320.2800188797 0.010153262306747344 0.01915300246692145 1.0148698333066477e-07 6.993589656570269 -0.10495271093938485 EVSTGTVLRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EVSTGTVLRSPR 12 1 A0A075B6G6;Q7Z7B0-2;Q7Z7B0;Q7Z7B0-3 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 EVSTGTVLRS(1)PR;EVSTGTVLRS(1)PR 142.1 2.9296e-12 40007000.0 2989.3 2946.8999999999996 2617.6 3045.4 3556.1000000000004 2877.5 2852.0 2830.6 3906.2 4022.1000000000004 3986.0 True False 3493.8207586318317 3096.8846227724052 2988.815040556211 3791.523136713203 3033.002400737184 3181.99514007009 3370.171483114044 3231.846218348938 3021.4519369196164 3113.504816530235 2996.1661919964854 1.1660971170306598 1.0336157690601289 0.997546480745991 1.265458220188625 1.012294447764312 1.0620222431485946 1.1248279525069806 1.0786605319097495 1.0084393666114635 1.039162922553225 1.0 11.548901934399803 -8.738856106432129 4.2390617491399984 1.0035799702818957 1.0913082145532882 0.17884038233496402 0.07233829322367276 0.21327918031517476 8.607923920369524 0.011691299205448348 0.01291348464454368 1.8245001086698468e-09 8.738856106432129 0.08772824427139247 EVSTYIK ddPTM_A549_MK2206_60min_R1 2 EVSTYIK 7 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 144.83 0.012156 70785000.0 15549.0 17176.9 14978.9 13771.0 20629.0 16431.5 15826.6 15257.8 20473.1 20173.0 19011.1 False True 18173.291063448407 18051.13084152816 17103.133256031277 17144.89561820369 17594.50142707106 18170.27042365304 18702.088357171368 17420.63987505278 15835.97553882264 15615.90528924303 14290.119190332267 1.2717382424453978 1.263189662808435 1.1968502871272135 1.1997727513569496 1.231235456662553 1.271526862837213 1.3087426429461793 1.2190688994979422 1.1081765888654165 1.0927764199341108 1.0 13.802730329194107 -9.05427313351119 1.2386516996792427 1.0316105177036587 1.2478182378879201 0.7920740308582976 0.040607028035155125 0.1119885806229927 0.3518982750747112 0.009637438400224796 0.00905323833512508 8.825246944620375e-10 9.05427313351119 0.21620772018426138 EVSTYIK ddPTM_A549_PD325901_60min_R1 2 EVSTYIK 7 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 143.0 0.013392 134741000.0 25085.0 23856.0 23614.0 22808.0 28100.0 22159.0 24306.0 24255.0 24796.0 26207.0 26828.0 False True 27631.61073339904 25866.428842639292 25216.58804251753 24216.798359273696 26126.35293973734 21978.54445079304 25230.978130753534 23771.214997320585 23753.91035041275 24552.285547485404 23528.326076703986 1.1743976449203424 1.0993739528393531 1.0717544444219997 1.0292614221821494 1.110421236706921 0.9341312415996552 1.0723660513926399 1.0103232554591757 1.0095877740291996 1.043520285609917 1.0 14.52211106319104 -2.000000000000578 0.3649366353796779 1.0035107311458737 3.1772311610417714 0.5483737566561522 0.04159465451642425 23.655243411038953 0.28702833585499793 0.008693085977099935 36.40654825043676 0.009999999999986686 2.000000000000578 2.173720429895898 EVSTYIKK ddPTM_A549_PD325901_60min_R1 2 EVSTYIKK 8 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 78.149 0.0043789 13090900.0 7374.9 7798.1 8160.7 8341.5 9144.7 11689.7 10691.9 11330.6 10944.3 9166.2 11318.8 False True 8123.594418885564 8455.273254434325 8714.534176275634 8856.735510078992 8502.40781950236 11594.50295890769 11098.78610533218 11104.60229431626 10484.349130828452 8587.444567686518 9926.659355784896 0.8183613567993978 0.8517742929807398 0.8778919336238854 0.892217128909295 0.8565225736841131 1.1680166049166214 1.1180786715385989 1.1186645875830223 1.056181012670547 0.8650890757807729 1.0 13.277092570218747 -7.237812346177825 24.806654656214473 1.0512975217921046 0.8617880423166664 0.6212991322143242 0.07576843053100675 308.6246613366841 324033.4242781098 0.008998018718677836 0.015579585590948526 5.783458902605008e-08 7.237812346177825 -0.18950947947543817 EVVCTTQNT(ph)PTVKK ddPTM_A549_MK2206_60min_R1 3 EVVCTTQNTPTVKK 14 1 H0YLV8;H0YNU5;A0A3B3IT82;P54132 H0YLV8 BLM Bloom syndrome protein 1 EVVCT(0.001)T(0.004)QNT(0.968)PT(0.027)VKK;EVVCT(0.039)T(0.036)QNT(0.893)PT(0.032)VKK;EVVCT(0.001)T(0.001)QNT(0.996)PT(0.003)VKK 66.965 0.00071898 5797100.0 3104.0 3855.7 3629.9 2838.8 4246.5 3138.6000000000004 2799.3 3307.0 5448.7 5201.6 6058.0 True False 3627.879314486066 4051.938660973755 4144.674402397232 3534.306127438576 3621.845475304535 3470.7245687659356 3307.896575273891 3775.7773772627515 4214.578149785959 4026.554947331905 4553.631407705649 0.7967002573697497 0.8898257891750022 0.910191017082239 0.7761511222576839 0.7953751964148115 0.7621882972110523 0.7264304637560856 0.8291794041286228 0.9255422260690788 0.8842513999965335 1.0 12.152801802356118 -8.922862739968023 2.012021029931906 0.9722882636671789 0.8095752445039348 0.4705349534928419 0.057635752413865295 0.14977728340650565 1.1998506559702105 0.011243891470875936 0.01149485825832638 1.1943655275111093e-09 8.922862739968023 -0.1627130191632441 EVVKPVPIT(ph)SPAVSK ddPTM_A549_MK2206_60min_R1 2 EVVKPVPITSPAVSK 15 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 EVVKPVPIT(0.607)S(0.393)PAVSK;EVVKPVPIT(0.736)S(0.264)PAVSK 143.57 6.2657e-14 229600600.0 12223.78 13297.23 14384.8 13861.99 18488.3 14268.15 13034.81 12426.37 19888.9 18212.2 20182.0 True False 14286.855221272073 13974.002209938559 16424.780942616515 17258.178172288375 15768.695561302913 15777.996162568557 15403.066251686438 14187.846001662087 15384.095906046943 14098.051371077765 15170.25240513625 0.9417677992249436 0.9211450038370704 1.0826966159808595 1.1376328957087891 1.0394484640192305 1.0400615455301547 1.0153467351981147 0.935241261830189 1.014096238823178 0.9293221361501233 1.0 13.888957469129716 -8.000308662047129 24.671346780734638 1.0002391469157743 1.030191181644909 0.08860740239291964 0.06298589383061205 26.62413278930831 2128239.6877148263 0.009882749028574786 0.013570008433281483 9.992895318735914e-09 8.000308662047129 0.029952034729134658 EVVKPVPIT(ph)SPAVSK ddPTM_A549_PD325901_60min_R1 1 EVVKPVPITSPAVSK 15 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 EVVKPVPIT(0.5)S(0.5)PAVS(0.001)K 94.85600000000001 1.2382e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EVVKPVPITS(ph)PAVSK ddPTM_A549_MK2206_60min_R1 1 EVVKPVPITSPAVSK 15 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 EVVKPVPIT(0.091)S(0.909)PAVSK 145.05 3.7857e-14 229240000.0 6904.1 7536.2 7640.2 7286.4 9975.9 7623.2 8207.8 6929.9 10976.0 10403.0 10371.0 True False 8069.343290961098 7919.76039028722 8723.695244826395 9071.56832709893 8508.458324994821 8429.881964129383 9699.051016515932 7912.23454692867 8489.953525070334 8052.955074802713 7795.594474961258 1.0351158358582013 1.0159277032335086 1.11905452147955 1.1636788388924006 1.09144445010874 1.081364864630324 1.2441708002729495 1.0149623062541349 1.0890706991415848 1.0330135951360828 1.0 12.9284433285443 -10.359297514992255 0.6608838960893711 0.9973655788562069 1.0989153189873624 0.18196082285089787 0.06374878478571183 0.9087026921447423 0.7006290546827348 0.04886991795136534 0.013402349174643925 4.3722248171188773e-11 10.359297514992255 0.10154974013115547 EVVKPVPITS(ph)PAVSK ddPTM_A549_PD325901_60min_R1 5 EVVKPVPITSPAVSK 15 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 EVVKPVPIT(0.21)S(0.788)PAVS(0.002)K;EVVKPVPIT(0.41)S(0.589)PAVS(0.001)K;EVVKPVPIT(0.126)S(0.874)PAVSK;EVVKPVPIT(0.204)S(0.796)PAVSK;EVVKPVPIT(0.133)S(0.867)PAVSK 139.0 1.1484999999999998e-10 889612400.0 26150.0 27827.7 30702.899999999998 29352.5 33122.200000000004 34218.899999999994 33250.3 32374.600000000002 35842.09999999999 30213.199999999997 31488.6 True False 28804.72874938745 30172.83794032164 32786.5834255362 31165.5372606358 30795.81093738679 33940.23262364011 34515.658361762304 31728.863205617617 34335.78118126023 28305.53339578302 27615.70182268158 1.043056190798283 1.0925971801860854 1.187244258214275 1.1285440964255573 1.1151558318207684 1.2290193760624983 1.2498562804372977 1.148942851764056 1.2433426969094536 1.0249796864671699 1.0 14.753201171931671 -3.610266093647401 16.579126862816526 1.1340400977890956 0.5158638894404336 0.0 0.0840333341962481 0.0 0.0 0.013159408240021347 0.0 0.0002453205368176959 3.610266093647401 -0.618176208348662 EVVSFS(ph)PDPLPVR ddPTM_A549_MK2206_60min_R1 1 EVVSFSPDPLPVR 13 0 F8W925;Q8NFI3-2;Q8NFI3-3;Q8NFI3;J3QLG5 F8W925 ENGASE Cytosolic endo-beta-N-acetylglucosaminidase 1 EVVS(0.161)FS(0.839)PDPLPVR 84.365 0.00038252 1093000.0 601.43 990.18 853.18 918.06 748.6 730.53 718.14 1075.1 1367.9 1191.4 1258.2 True False 702.9366804482461 1040.5759325992674 974.1737531715113 1142.9847412132797 638.4819316644234 807.8341997134322 848.6167422452728 1227.4987173556644 1058.0728340874364 922.2619125367647 945.7542154465577 0.743255138562972 1.1002604224269172 1.030049601958723 1.2085431104037907 0.6751034478476533 0.8541692825889191 0.897290996313012 1.2979045689752227 1.1187608966541536 0.9751602450974003 1.0 9.885321491491132 EVVSFS(ph)PDPLPVR ddPTM_A549_PD325901_60min_R1 2 EVVSFSPDPLPVR 13 0 F8W925;Q8NFI3-2;Q8NFI3-3;Q8NFI3;J3QLG5 F8W925 ENGASE Cytosolic endo-beta-N-acetylglucosaminidase 1 EVVS(0.003)FS(0.997)PDPLPVR;EVVS(0.018)FS(0.982)PDPLPVR 126.34 1.2688e-06 4559500.0 2054.13 1946.8799999999999 1944.83 1772.53 2418.7 1651.4299999999998 1934.3200000000002 2140.52 2068.78 1833.0700000000002 2402.2 True False 2262.6637654294186 2110.9504101759544 2076.8178590128477 1882.015152392294 2248.8188560620183 1637.981301609871 2007.9316061005181 2097.825649394546 1981.8363709762425 1717.329647366316 2106.744628800445 1.0740095095046012 1.0019963413306074 0.985794780545074 0.8933285632553818 1.0674378020569435 0.7774939967652927 0.9530968199234524 0.995766463915953 0.9407102996174133 0.8151579569205514 1.0 11.040799731664173 -5.335812180482298 1.706825701142675 0.9603139299402599 1.1019094700917278 0.16438815427267572 0.08209720422814354 0.9951653914783263 3.145596808354133 0.009314183905915553 0.21802712211994435 4.615171239128426e-06 5.335812180482298 0.1415955401514679 EVY(ph)FAER ddPTM_A549_MK2206_60min_R1 2 EVYFAER 7 0 P50238 P50238 CRIP1 Cysteine-rich protein 1 1 EVY(1)FAER;EVY(1)FAER 71.342 0.021765 4170500.0 1492.01 1537.06 1135.85 1096.7 1904.46 1300.8600000000001 1253.78 1438.94 2200.5 2194.9 2299.6 True False 1743.8248118577194 1615.2897886859246 1296.9306096484459 1365.3915492327335 1624.3164568229079 1438.5161417590186 1481.575596808809 1642.9141515689328 1702.090263476426 1699.0705655757463 1728.5458542687197 1.0088391971501756 0.9344789926728849 0.7503015360834189 0.7899076242963641 0.9397011093524579 0.8322117334674923 0.8571225305652107 0.9504602654952337 0.9846948863248489 0.9829479278086937 1.0 10.755343160086886 -8.449083718616823 2.8596213621786646 0.9926891805622605 0.8685888959473334 0.36618192880880207 0.06815749253166621 0.20436782791258729 3.283627126024025 0.01187711460303619 0.014268899642013564 3.5556277039750555e-09 8.449083718616823 -0.12410028461492717 EVY(ph)FAER ddPTM_A549_PD325901_60min_R1 1 EVYFAER 7 0 P50238 P50238 CRIP1 Cysteine-rich protein 1 1 EVY(1)FAER 48.79600000000001 0.059398 2536500.0 1170.7 1381.3 1465.1 1243.2 1398.7 1025.7 1380.7 1636.4 1492.5 1528.2 1353.6 True False 1289.5486021762104 1497.7069986727718 1564.5304963620065 1319.9896404879457 1300.4601372530483 1017.3470392697517 1433.24329404803 1603.7607182690338 1429.7754153085589 1431.7091911957566 1187.1157811773717 1.0862871361184725 1.261635151701343 1.3179257837936567 1.111929991511688 1.0954787712140956 0.8569905778362708 1.2073323569387235 1.3509724524750544 1.2044110928173488 1.2060400627273267 1.0 10.213244934708863 -10.7631262785154 1.0870049770136987 1.0027934080384462 1.1681330852344916 0.0 0.14087673764589034 0.7062233255926239 1.5203633616847305 0.08509420598882414 0.023186187054710133 1.7253361481858585e-11 10.7631262785154 0.16533967719604536 EVYELLDS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 EVYELLDSPGK 11 0 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 EVYELLDS(1)PGK;EVYELLDS(1)PGK 160.18 2.2845e-13 27791000.0 7065.3 7487.6 5892.3 5803.1 9831.400000000001 8311.0 7699.6 8745.2 9996.5 9002.4 8967.0 True False 8257.74990999949 7868.686857874598 6727.916741851071 7224.859760511056 8385.214083576828 9190.464503604693 9098.517654763287 9984.858881051767 7732.308711130243 6968.7515875616655 6740.246423389986 1.2251406538110337 1.1674182757723368 0.9981707372751047 1.071898459890037 1.2440515608566594 1.3635205489983224 1.3498790820450768 1.4813789072165573 1.147184869131432 1.0339016038610578 1.0 12.718585621959996 -9.592002063405197 1.468237335806673 1.0358847298570248 1.228511443293791 0.27978817885267093 0.13004065414278657 0.3712017184303394 1.6244825283699222 0.0359738351476003 0.0274939721661862 2.558573730668131e-10 9.592002063405197 0.19262671343676607 EVYELLDS(ph)PGK ddPTM_A549_PD325901_60min_R1 4 EVYELLDSPGK 11 0 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK 186.76 9.640799999999999e-19 54502000.0 29036.2 29874.0 29555.9 27397.600000000002 36335.299999999996 27164.300000000003 28328.1 28282.0 29714.699999999997 29546.399999999998 29859.600000000002 True False 31983.93364867934 32391.586822812125 31561.74110806486 29089.88752753584 33783.23387798001 26943.08294709495 29406.141347231107 27717.8933232002 28465.89449465273 27680.83526157981 26187.05849559977 1.221364119763723 1.2369310905329405 1.20524193709531 1.1108497555165975 1.2900736401400956 1.028870155524425 1.122926477296877 1.0584576854195997 1.087021457543079 1.0570425565830939 1.0 14.676566395246283 -4.963280525570434 0.14129353059800023 0.9550737104870347 1.5330637981928785 0.5822682569040819 0.058749505590076634 11.895711439810947 0.24300269010050465 0.1525136093959695 1.2966825498991086 1.088226943484779e-05 4.963280525570434 0.5779900877058438 EVYFAER ddPTM_A549_MK2206_60min_R1 1 EVYFAER 7 0 P50238 P50238 CRIP1 Cysteine-rich protein 1 0 109.01 0.02437 8767300.0 3653.5 3429.5 3337.4 3089.9 4792.4 3965.9 3606.6 3373.7 4851.8 4780.7 4570.5 False True 4270.121480500916 3604.046901421141 3810.6935041076936 3846.925638710884 4087.444308453891 4385.568905648639 4261.87253541343 3851.932306522932 3752.875046732527 3700.7365496596494 3435.5187106171443 1.2429335539068702 1.0490546566616494 1.109204700976044 1.11975103696054 1.189760456207685 1.2765376279557015 1.2405324768695096 1.1212083621081441 1.092375085932329 1.077198775900383 1.0 11.746312224968387 -9.290392713494862 1.013366988200221 1.0217411262405598 1.167855560788916 0.36172045739150593 0.06709128207883584 0.3100252974525029 0.6695119706491541 0.018441417696716617 0.014938188596361597 5.123978354999978e-10 9.290392713494862 0.14611443454835626 EVYFAER ddPTM_A549_PD325901_60min_R1 2 EVYFAER 7 0 P50238 P50238 CRIP1 Cysteine-rich protein 1 0 ; 109.01 0.02437 18112500.0 5380.0 5356.700000000001 4907.5 5992.9 6088.8 5146.5 5377.6 5057.5 5477.4 5747.299999999999 6813.1 False True 5926.17363945333 5808.127908340285 5240.552461194831 6363.067822136595 5661.143693219671 5104.588610316639 5582.247510735636 4956.624194968003 5247.203926171591 5384.4144971596415 5975.131891799312 0.9918063311015485 0.9720501594804568 0.8770605496403069 1.0649250823851626 0.9474508338450938 0.8543055957179008 0.9342467433057171 0.8295422234563258 0.8781737409634789 0.9011373463654564 1.0 12.544754843369653 -6.997643948580903 24.980644873667593 0.9245391267002184 0.973688304117341 0.2090094526179631 0.060629390638042534 145.88002638558007 1546689.9566290264 0.010132097906172682 0.019063329066948968 1.005439750883043e-07 6.997643948580903 0.04914917741712255 EVYMT(ph)PLR ddPTM_A549_MK2206_60min_R1 3 EVYMTPLR 8 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 EVY(0.101)MT(0.899)PLR;EVYMT(1)PLR;EVYMT(1)PLR 103.7 0.002246 24596500.0 2755.8299999999995 2710.9 2521.95 1962.2599999999998 3487.43 3064.06 3043.4100000000003 2674.9299999999994 3531.45 4106.389999999999 3624.2799999999997 True False 3220.946730425302 2848.8732308099056 2879.6004322779404 2443.0137880891994 2974.4336667705857 3388.2967954415817 3596.3582024628718 3054.1095191295576 2731.582213566837 3178.7536469882834 2724.271250960617 1.182314987646531 1.0457377288716576 1.0570167824744148 0.8967586422342333 1.0918272788444827 1.2437442836306478 1.3201175181049773 1.1210739452074145 1.00268363974536 1.1668271453760006 1.0 11.411654641805363 -8.763064101567688 21.980524238541783 1.001267236302217 1.1176992194112405 0.0 0.11552477893622805 11.935807725767834 161476.04364581348 0.019520999613946117 0.021336149860230157 1.7255831782991798e-09 8.763064101567688 0.11643198310902347 EVYQQQQYGS(ph)GGR ddPTM_A549_PD325901_60min_R1 2 EVYQQQQYGSGGR 13 0 Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 EVYQQQQYGS(1)GGR;EVYQQQQYGS(1)GGR 163.33 8.415299999999999e-19 19115600.0 7780.8 7762.2 8052.400000000001 7518.0 8778.5 8545.0 7934.6 9486.6 9366.5 8378.1 9586.1 True False 8570.701088077778 8416.347835443272 8598.88428701483 7982.3697853831845 8161.928444180934 8475.412353085721 8236.555544979723 9297.382320906265 8972.858577881147 7849.1053361845115 8407.070471294624 1.019463452500114 1.0011035192556461 1.022815773505782 0.9494829159144613 0.9708409691639066 1.0081290958633504 0.9797176761040468 1.105900367155426 1.0672990798064994 0.9336314430793405 1.0 13.037387451038029 EWFLQAAKDPS(ph)AVAK ddPTM_A549_PD325901_60min_R1 1 EWFLQAAKDPSAVAK 15 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6 P06744-2 GPI Glucose-6-phosphate isomerase 1 EWFLQAAKDPS(1)AVAK 74.36399999999999 0.0002041 6235600.0 3253.4 3280.3 3301.8 3306.9 3559.0 3542.1 2852.0 2970.2 3845.0 3560.4 4469.8 True False 3583.6827729735055 3556.742393213852 3525.8800033363436 3511.1597024851917 3309.02811788346 3513.2543119795137 2960.5344206742843 2910.957030923175 3683.4080213476764 3335.595736378334 3920.0429363967282 0.914194775699982 0.9073223051182141 0.8994493327099381 0.8956941950520116 0.8441305800913221 0.896228528356087 0.755230100463028 0.7425829456855141 0.939634611434495 0.850907959555256 1.0 11.93665374098915 -8.968687172696757 11.948105922644196 0.9734110693769721 0.8576353695769864 0.12684798733441605 0.06740301760831459 0.500453852549742 189.49836383973127 0.010919531237455255 0.011439716948066314 1.0747632979357401e-09 8.968687172696757 -0.1157756997999857 EWNGVVSES(ph)DSPVKRPGRK ddPTM_A549_MK2206_60min_R1 1 EWNGVVSESDSPVKRPGRK 19 3 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVS(0.016)ES(0.492)DS(0.492)PVKRPGRK 47.728 0.0057702 15732000.0 1545.4 1721.7 1507.3 1570.7 2429.2 1709.2 1681.4 1779.2 2951.4 2372.8 2662.8 True False 1806.2257385975427 1809.327176024721 1721.0578051002362 1955.5215705114024 2071.8678979417805 1890.0664095248628 1986.8886156058745 2031.40704857148 2282.912612417327 1836.7828320188307 2001.553270458667 0.9024120243293031 0.9039615396347177 0.8598611041243216 0.9770020110747709 1.0351300305222457 0.9442998282487599 0.9926733626982449 1.0149153053048505 1.140570498977619 0.9176787143906102 1.0 10.966904297591551 -6.960727417329765 0.6618950454277976 1.0618076526128022 0.8809783386101326 0.23737524430183887 0.06516114476761203 0.518858272154679 0.4057069669504561 0.01232411293744344 0.04665261619205983 1.094643197809826e-07 6.960727417329765 -0.18082931400266955 EWNGVVSES(ph)DSPVKRPGRK ddPTM_A549_PD325901_60min_R1 2 EWNGVVSESDSPVKRPGRK 19 3 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVS(0.002)ES(0.659)DS(0.339)PVKRPGRK;EWNGVVS(0.001)ES(0.675)DS(0.324)PVKRPGRK 139.83 2.1371999999999997e-18 60597000.0 5440.5 5332.8 5114.6 5267.9 4645.5 6081.799999999999 4940.2 5646.6 6290.7 6903.8 7481.4 True False 5992.815554915583 5782.21377146323 5461.707512588299 5593.28621873106 4319.216106104975 6032.271837214361 5128.202014381171 5533.974133327993 6026.323755498523 6467.892889790121 6561.235228502058 0.9133669722558863 0.8812690857881832 0.8324206223947891 0.8524745758898844 0.6582931347046156 0.9193805171029571 0.7815909406972974 0.8434348016191167 0.9184739680296973 0.9857736637292843 1.0 12.679751729120877 -9.19200392049049 1.0073010265384086 0.9805862681832767 0.8307073449578456 0.43519582329250217 0.06878070606434569 0.290957870445546 0.6184770812937992 0.017090255423607675 0.014543450128679877 6.426819156321804e-10 9.19200392049049 -0.14987892322543106 EWNGVVSESDS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 EWNGVVSESDSPVK 14 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVSESDS(1)PVK;EWNGVVSESDS(1)PVK 278.79 3.682699999999999e-99 79612000.0 25986.0 26780.0 18743.0 16591.5 34695.0 27119.0 25391.8 26514.3 35545.0 37358.0 37960.0 True False 30371.801503297338 28142.98761337169 21401.039236378772 20656.418244820736 29591.41146018858 29988.714579864714 30005.161383217073 30272.78322163825 27494.11425370124 28918.801853742196 28533.484357297202 1.0644266617767626 0.9863144388874594 0.7500324519919921 0.7239360600395103 1.0370766882040756 1.0510007892602626 1.0515771928689635 1.0609564132638514 0.9635736704784829 1.0135040463905507 1.0 14.800368311469217 EWNGVVSESDS(ph)PVK ddPTM_A549_PD325901_60min_R1 3 EWNGVVSESDSPVK 14 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVSES(0.105)DS(0.895)PVK;EWNGVVSES(0.012)DS(0.988)PVK;EWNGVVS(0.001)ES(0.014)DS(0.985)PVK 220.93 8.189199999999999e-40 101834000.0 26474.1 22031.6 22107.6 20669.3 24913.8 22049.7 20021.199999999997 19539.699999999997 25356.8 24270.0 28415.2 True False 29161.73114279767 23888.280251906916 23607.954679798455 21945.995717613827 23163.940635944084 21870.134553754742 20783.117722021012 19149.96535490188 24291.14187664728 22737.588058055902 24920.31053879375 1.170199347933536 0.9585867806390189 0.9473379010685948 0.8806469599746852 0.9295205450945122 0.8776028099533205 0.8339830954220125 0.768448102807182 0.9747527760070632 0.9124119068524457 1.0 14.60503442584019 -5.258500873708089 4.191077017889593 0.9426875921707918 1.1890472316250633 0.476988645986303 0.07115140043277197 0.18698677871828162 7.293452600577602 0.011691363520446111 0.13815087195493195 5.514410929984839e-06 5.258500873708089 0.24635963945427153 EWNGVVSESDS(ph)PVKRPGR ddPTM_A549_MK2206_60min_R1 5 EWNGVVSESDSPVKRPGR 18 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVSES(0.012)DS(0.988)PVKRPGR;EWNGVVS(0.037)ES(0.137)DS(0.827)PVKRPGR;EWNGVVSES(0.006)DS(0.994)PVKRPGR;EWNGVVS(0.008)ES(0.073)DS(0.919)PVKRPGR;EWNGVVSES(0.01)DS(0.99)PVKRPGR 167.36 2.1995e-25 387400000.0 19726.3 21353.1 17121.399999999998 16590.0 29415.499999999996 23257.7 21110.1 21334.4 31631.7 30954.4 31758.1 True False 23055.617178268854 22439.881583535738 19549.471972562314 20654.5507447534 25088.518916477235 25718.8143767882 24945.531916439602 24358.61653385982 24467.170455445274 23961.77954123554 23871.6872910295 0.9658143095286228 0.9400207580621331 0.8189396808958961 0.8652321259467473 1.050973842385452 1.0773773157816462 1.0449840269905695 1.0203977723440312 1.02494516441825 1.0037740210445827 1.0 14.543012921686376 -6.76178738589702 24.99998376828186 1.0225571366153345 0.8949272083483587 0.7054640095322042 0.04145320438788 4.350252481087514 312553.89861368836 0.006371327227143285 0.012596360217789955 1.730663419009654e-07 6.76178738589702 -0.12762992826697583 EWNGVVSESDS(ph)PVKRPGR ddPTM_A549_PD325901_60min_R1 4 EWNGVVSESDSPVKRPGR 18 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVSESDS(1)PVKRPGR;EWNGVVS(0.001)ES(0.011)DS(0.988)PVKRPGR;EWNGVVSES(0.006)DS(0.994)PVKRPGR;EWNGVVSES(0.009)DS(0.991)PVKRPGR 163.49 1.0460999999999998e-23 825849000.0 26171.4 25309.9 25092.7 24884.2 26474.0 27154.199999999997 23197.5 22186.799999999996 33248.7 29322.000000000004 33844.0 True False 28828.301261633624 27442.854098101776 26795.641516662992 26421.240517881393 24614.55757034187 26933.065198146305 24080.293556659075 21744.266868792096 31851.3727644688 27470.60391587617 29681.402554792363 0.9712580532006903 0.9245807723351958 0.9027754489430811 0.8901614561207929 0.8292922655829011 0.9074054080977952 0.8112923071005979 0.73258892765097 1.0731087490111235 0.9255156950607364 1.0 14.857271645734407 -8.786905863240328 24.99999461039356 1.0345235961623904 0.8724523454905396 0.3712081252610345 0.0704939484415642 119.19045213934115 117006.57315436691 0.011571975577534664 0.012321504173884687 1.6334059631707901e-09 8.786905863240328 -0.1620712506718508 EWNGVVSESDS(ph)PVKRPGRK ddPTM_A549_MK2206_60min_R1 3 EWNGVVSESDSPVKRPGRK 19 3 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 EWNGVVS(0.003)ES(0.116)DS(0.881)PVKRPGRK;EWNGVVS(0.001)ES(0.026)DS(0.973)PVKRPGRK;EWNGVVS(0.001)ES(0.162)DS(0.837)PVKRPGRK 129.32 3.2776e-17 68426000.0 5688.7 6069.3 6643.8 5930.799999999999 10213.2 7512.200000000001 7237.2 5831.8 10916.0 8902.9 10344.5 True False 6648.813484638171 6378.201445923702 7585.990742071881 7383.846266243728 8710.851809344233 8307.136017805224 8552.105560165828 6658.475509138466 8443.543429270021 6891.728706667416 7775.6751563240505 0.8550786074480762 0.8202762226681027 0.9756054091202747 0.9496083771244426 1.1202695115496937 1.0683491595001793 1.0998537603786467 0.8563212036607583 1.0858919977389725 0.886319010004204 1.0 12.924752233524814 -5.995346931624853 1.6689631309082178 1.0370149338203003 0.8298765279146192 0.3342493440730542 0.08495046975787973 0.2418574955001085 1.2340145905533098 0.010283331876918796 0.05078624350260566 1.0107716872268543e-06 5.995346931624853 -0.2071384059056811 EWSLESSPAQNWT(ph)PPQPR ddPTM_A549_MK2206_60min_R1 1 EWSLESSPAQNWTPPQPR 18 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 EWSLESSPAQNWT(1)PPQPR 179.14 5.135e-31 2486200.0 1070.0 1289.4 1350.7 1131.2 2035.7 1126.4 1219.0 1796.0 1875.1 1754.6 1814.1 True False 1250.5898410116286 1355.024952527313 1542.2495703236837 1408.344050781497 1736.2512266754838 1245.5949003561934 1440.476521008422 2050.588500019321 1450.3928439194037 1358.2346413773769 1363.6089033870608 0.9171176852140633 0.9937049759367028 1.1310057938848144 1.0328064353960427 1.27327654018892 0.9134546549690802 1.0563707214219782 1.5037951827139553 1.0636428379990632 0.9960587951601557 1.0 10.41321420904609 -5.536558242087145 4.388415198666153 1.0775652852488407 0.9300201875163632 0.10864027936551202 0.1553364383741997 0.34711041359865275 16.00308868630455 0.02115393465532789 0.1054380111223485 2.906978086140879e-06 5.536558242087145 -0.14754509773247748 EWSLESSPAQNWT(ph)PPQPR ddPTM_A549_PD325901_60min_R1 2 EWSLESSPAQNWTPPQPR 18 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 EWSLESSPAQNWT(1)PPQPR;EWSLESSPAQNWT(1)PPQPR 155.1 1.6852000000000003e-22 7243000.0 4611.0 4190.0 4427.0 4334.5 4822.7 4397.799999999999 4114.4 4586.1 4491.6 4851.4 5541.0 True False 5079.105325561209 4543.106004806277 4727.442841713604 4602.2322206362605 4483.970189411789 4361.985774885942 4270.975743486068 4494.626637774148 4302.8336719597455 4545.081776054894 4859.492127293009 1.0451926235325617 0.9348931710970844 0.9728265254638939 0.9470603306028905 0.9227240361658112 0.8976217391910452 0.878893438163717 0.9249169501747685 0.8854492525655452 0.9352997508788522 1.0 12.24658982817987 -5.260986859841653 23.568644132948954 0.9362334069265148 1.0451926802644362 0.46951598939372974 0.034632425247543064 15.775964207552553 821038.9975406067 0.006412427597398873 0.052112070244514815 5.482935540220938e-06 5.260986859841653 0.10895927333792144 EWT(ph)PAGK ddPTM_A549_MK2206_60min_R1 2 EWTPAGK 7 0 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EWT(1)PAGK;EWT(1)PAGK 90.65700000000001 0.013249 13283100.0 4555.4 4094.7 3207.1 2561.7 6053.6 5008.2 4415.1 4970.5 6858.5 5514.6 6236.9 True False 5324.24015116296 4303.102740122218 3661.915004801281 3189.316614999083 5163.1234591554285 5538.164399825894 5217.266520019921 5675.083596517842 5305.060700773947 4268.848029943963 4688.105600316831 1.1356911735953936 0.9178766663940774 0.7811076193662962 0.6802996534002013 1.1013240526848402 1.1813224513226865 1.1128730802623832 1.2105281067334124 1.1316000860593713 0.9105699388801025 1.0 12.194789351721214 -6.8050329131540925 24.978953938272326 1.0902244894964686 0.8745647423821711 0.3897984694270735 0.12865467540865214 101.23608849026789 58007.654647685624 0.018177347502041724 0.0343521074141538 1.5666323378479143e-07 6.8050329131540925 -0.21565974711429747 EWT(ph)PAGK ddPTM_A549_PD325901_60min_R1 2 EWTPAGK 7 0 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EWT(1)PAGK;EWT(1)PAGK 92.439 0.013009 13172700.0 6193.1 5277.0 5273.1 4902.9 6025.5 5104.799999999999 4791.0 4437.7 6818.6 6222.6 7727.7 True False 6821.818952880748 5721.7113096331095 5630.964275726227 5205.740997706203 5602.289666846528 5063.228201291047 4973.324126735795 4349.186592191696 6532.037954320229 5829.703974044438 6777.2418899263985 1.0065774637645157 0.8442536658072931 0.8308637004820526 0.7681208790029979 0.826632685956465 0.7470927382445891 0.7338271538054555 0.641734006669626 0.9638195095307669 0.8601882696129869 1.0 12.726482548982691 -8.914602214719427 10.599664206996579 0.9840690361323553 0.7982819905237897 0.2883584020366867 0.09301118650489168 0.24043495673909487 28.20922987409393 0.01503306082230789 0.015988531936204066 1.2173004576176556e-09 8.914602214719427 -0.18578704560856563 EYAENIGDGRS(ph)PEFR ddPTM_A549_MK2206_60min_R1 2 EYAENIGDGRSPEFR 15 1 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 1 EYAENIGDGRS(1)PEFR;EYAENIGDGRS(1)PEFR 223.07 1.5124999999999997e-54 63474000.0 5792.9 6438.2 5536.7 5181.799999999999 8136.099999999999 6627.7 5845.8 7689.200000000001 8851.599999999999 8454.599999999999 7384.2 True False 6770.599897192762 6765.87688022441 6321.887314733951 6451.341232619843 6939.290467826501 7329.038814888798 6907.906190739152 8779.167647187398 6846.726733100628 6544.699988025285 5550.499346447679 1.219818159518557 1.218967242029237 1.138976319090995 1.162299250922118 1.2502101224942308 1.320428732160717 1.2445558065258064 1.58168970018996 1.2335334725302751 1.1791191349682608 1.0 12.438401852924372 -10.263295411931058 1.0123002219549824 1.0196307855402817 1.2604214833743907 0.19180948340883985 0.12153627595955203 0.36541785658504994 0.7383335993679098 0.050581157546062905 0.02196989619407245 5.453867567604243e-11 10.263295411931058 0.240790697834109 EYAENIGDGRS(ph)PEFR ddPTM_A549_PD325901_60min_R1 2 EYAENIGDGRSPEFR 15 1 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 1 EYAENIGDGRS(1)PEFR;EYAENIGDGRS(1)PEFR 148.69 2.2444e-14 99561000.0 8529.4 8813.7 9365.2 8173.8 10876.5 7100.3 8160.8 8407.5 10168.599999999999 10728.2 9718.5 True False 9395.29840898759 9556.461430682844 10000.778789522537 8678.67706195332 10112.572161888023 7042.477510896965 8471.363709761114 8239.805816943845 9741.249104259035 10050.819621113938 8523.186110647373 1.1023223342795192 1.121231110833621 1.1733615410590787 1.0182432894562403 1.1864779239368186 0.8262728772400416 0.9939198323005617 0.9667518355196394 1.1429116973158697 1.1792326825479273 1.0 13.05717711966519 EYAENIGDGRS(ph)PEFRENEQK ddPTM_A549_MK2206_60min_R1 1 EYAENIGDGRSPEFRENEQK 20 2 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 1 EYAENIGDGRS(1)PEFRENEQK 65.071 0.0003548 38690000.0 1594.8 1558.8 1301.1 1077.7 1811.0 1330.7 1160.9 962.86 2135.3 1944.9 1992.6 True False 1863.963250883499 1638.136261826878 1485.6155444940741 1341.7365483797907 1544.6042990171936 1471.5137907528297 1371.820503067002 1099.34835363508 1651.6579593734216 1505.545739208286 1497.7824270376818 1.2444819869932984 1.0937077590546902 0.9918767356833853 0.8958153895779649 1.031260796718063 0.9824616474257838 0.9159010536531613 0.733984011155328 1.1027355706396391 1.0051832042027349 1.0 10.548612352897248 -5.392112359365124 2.4918914828299776 1.0012177205149857 1.2645801040871625 0.3979843316217496 0.09622251667974797 0.3713042903364232 3.4125902801204355 0.015032469293992667 0.1809376124998256 4.054036370670276e-06 5.392112359365124 0.2633623835721768 EYCLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 EYCLSPR 7 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 EYCLS(1)PR;EYCLS(1)PR 97.635 0.011616 25426000.0 2986.0 3345.0 3175.0 3117.5 4314.4 3316.3 2835.3999999999996 2805.2 4604.3 4269.8 4734.8 True False 3489.963799309085 3515.2462123498226 3625.2627421171974 3881.2876399498928 3679.757475251118 3667.2286648182217 3350.555477987924 3202.845690564702 3561.433401556245 3305.2492144951107 3559.0184861678304 0.9805972665983256 0.9877010265644505 1.0186130688016446 1.0905500083898314 1.033924799647021 1.0304045003056184 0.941426826247152 0.8999238703065471 1.0006785340952289 0.9286968380021073 1.0 11.797263711140971 EYCLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 EYCLSPR 7 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 EYCLS(1)PR;EYCLS(1)PR 110.41 0.008402600000000001 39715000.0 8448.900000000001 8242.1 9301.6 8043.0 6998.1 7802.4 7973.2 8942.099999999999 6779.3 7197.5 8041.4 True False 9306.626108248556 8936.690692652472 9932.862511064674 8539.797843021675 6506.577598134372 7738.859841277474 8276.624489102453 8763.742800558259 6494.389596650796 6743.048621666967 7052.3587786345415 1.3196472840326028 1.2671917259409156 1.4084454326340792 1.210913697257349 0.9226101227076479 1.0973434682198415 1.1735966289997728 1.2426683150477875 0.9208819063950434 0.9561408931853206 1.0 12.783890156227487 -6.391848307455587 0.36751305923768485 0.9625678871696054 1.4665108770003847 0.5042671052391974 0.11386065951137783 1.7154137314146107 0.27489517568091726 0.04015637157290564 0.33819849825204307 4.056501982326367e-07 6.391848307455587 0.5039429898307793 EYDQLY(ph)EEYTR ddPTM_A549_MK2206_60min_R1 2 EYDQLYEEYTR 11 0 A0A5F9ZHY3;E9PFP1;O00459 A0A5F9ZHY3 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta 1 EYDQLY(0.988)EEY(0.011)T(0.001)R;EYDQLY(0.997)EEY(0.002)TR 90.10799999999999 0.00031717 1016510.0 992.6199999999999 999.59 844.08 815.94 1137.65 953.0699999999999 1139.05 1099.98 1742.36 1064.69 1506.75 True False 1160.1499887709917 1050.4648614059074 963.7832363358376 1015.8453366289385 970.3031920358424 1053.923234803336 1346.0006408979839 1255.9055335474684 1347.7182419771814 824.175789540681 1132.5823908155303 1.0243404790494854 0.927495315064458 0.8509608167595236 0.8969284220439506 0.8567175332270205 0.9305488442606328 1.188435077053228 1.1088866856239374 1.1899516122679072 0.7276961007200745 1.0 10.145400289015193 -7.6664244115166715 6.9368439356975475 1.1002755546594378 0.907031762027097 0.13412339570508103 0.1296554127151379 0.12731704040161562 8.003954815302542 0.01283049608679756 0.01904805471396694 2.1556367971631675e-08 7.6664244115166715 -0.19324379263234082 EYDQLY(ph)EEYTR ddPTM_A549_PD325901_60min_R1 1 EYDQLYEEYTR 11 0 A0A5F9ZHY3;E9PFP1;O00459 A0A5F9ZHY3 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta 1 EYDQLY(0.999)EEY(0.001)TR 105.86 0.00017719999999999997 1088500.0 813.75 594.66 740.25 654.07 682.0 772.46 871.22 669.64 837.08 618.09 678.68 True False 896.3613009489122 644.7740851594513 790.4878164848648 694.4704183992526 634.0986727722733 766.1693418682969 904.3747538498766 656.2835048775825 801.9004386241124 579.0636919161004 595.2066625069872 1.505966511150049 1.0832776676989602 1.3280896641098756 1.1667719166216493 1.0653420277613737 1.28723246920863 1.519429822980619 1.1026145139460335 1.3472638818365021 0.9728783771960932 1.0 9.217246865266358 -10.891698481670238 1.0567526446117954 0.9948370069920894 1.2647857904364295 0.3423065643353115 0.1492125967592553 0.5266228866480509 1.0105948429617788 0.10880495363063576 0.02407706607937328 1.2832211774975421e-11 10.891698481670238 0.26994878344434003 EYEEDDILAS(ph)DDPSSIEQYENTR ddPTM_A549_MK2206_60min_R1 1 EYEEDDILASDDPSSIEQYENTR 23 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 EYEEDDILAS(0.999)DDPS(0.001)SIEQYENTR 126.59 5.0965000000000006e-17 1220600.0 145.41 134.96 308.89 145.94 207.6 235.3 150.93 104.37 361.37 334.37 345.74 True False 169.95165306682313 141.8288875392324 352.69524674411986 181.69530655149552 177.06231500605702 260.19928982050095 178.35202733043567 119.16476711971971 279.5202719893097 258.83558476994943 259.8832160614312 0.6539539399368136 0.545740851174117 1.3571297603949528 0.6991421350909648 0.6813149294112284 1.001216214589999 0.6862775905015613 0.4585319857345137 1.0755610778775213 0.9959688382060267 1.0 8.02171965357011 EYEEDDILAS(ph)DDPSSIEQYENTR ddPTM_A549_PD325901_60min_R1 2 EYEEDDILASDDPSSIEQYENTR 23 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 EYEEDDILAS(0.994)DDPS(0.005)S(0.001)IEQYENTR;EYEEDDILAS(0.921)DDPS(0.067)S(0.011)IEQYENTR 101.71 1.4121999999999998e-10 6311400.0 196.59 114.62 351.02 192.77 153.17 131.17 157.34 143.17 141.94 282.75 341.59000000000003 True False 216.54767207809107 124.27942965892495 374.84232805473465 204.67696508756543 142.4118676078139 130.10179500927487 163.32765979975167 140.31436203530774 135.97475540964612 264.897116745583 299.5765955174188 0.7228457607113035 0.41485026373396633 1.2512403627770698 0.6832208128076699 0.47537714807742176 0.4342855782327299 0.5451949926784418 0.46837558118637873 0.45388978125876295 0.884238357432634 1.0 8.226781107129835 -10.897182215307318 1.1645382787368943 0.9986140839981404 0.5947955806615994 0.2388981388252156 0.22885527644385406 0.49951530880568656 1.2097022198383351 0.16033256424316866 0.0388655339114376 1.2671201134782213e-11 10.897182215307318 -0.403818503336541 EYEGGRGES(ph)SKR ddPTM_A549_MK2206_60min_R1 2 EYEGGRGESSKR 12 2 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EYEGGRGES(0.5)S(0.5)KR;EYEGGRGES(0.714)S(0.286)KR 51.54600000000001 0.0054897 43320000.0 1800.83 1926.89 1838.3799999999999 1595.2 2264.44 1840.73 1645.95 1699.06 3056.05 2666.09 2738.95 True False 2104.766077933616 2024.9604705873694 2099.0899275128863 1986.0240716112498 1931.3438756855292 2035.5148268223145 1944.997809478106 1939.9069581530232 2363.859554509036 2063.8184173200775 2058.7931238255824 1.0223300503464905 0.9835667543053834 1.0195730222823096 0.9646545097842976 0.9380951652377626 0.9886932316152227 0.9447271738813536 0.9422544381478948 1.1481773118207181 1.0024408928883333 1.0 11.007583153862159 -8.743338182600198 24.999905498125766 1.0699726294252774 0.9750330921963506 0.3188169587461731 0.046238459203273484 192.0606356453785 265258.29992165806 0.00978535385920326 0.011084219427336393 1.8057674377365377e-09 8.743338182600198 -0.09493953722892678 EYEGGRGES(ph)SKR ddPTM_A549_PD325901_60min_R1 4 EYEGGRGESSKR 12 2 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EYEGGRGES(0.661)S(0.339)KR;EYEGGRGES(0.786)S(0.214)KR;EYEGGRGES(0.803)S(0.197)KR;EYEGGRGES(0.942)S(0.058)KR 76.358 0.00023902 87870000.0 12344.7 11703.5 12588.3 12226.900000000001 14774.5 10724.1 10383.1 12226.0 13371.5 13386.599999999999 14456.7 True False 13597.92485631217 12689.795018436827 13442.61773759734 12982.12784369535 13736.790089257982 10636.766485164024 10778.234552350332 11982.142838888542 12809.542355643815 12541.367791428545 12678.61754857189 1.0725084816399268 1.0008816000500147 1.060258950638629 1.0239387530983335 1.083461192565532 0.8389531780112841 0.8501111821583721 0.9450669832877955 1.0103264260926201 0.9891747064206693 1.0 13.630109824983283 EYEGGRGESS(ph)KR ddPTM_A549_MK2206_60min_R1 1 EYEGGRGESSKR 12 2 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EYEGGRGES(0.427)S(0.573)KR 48.823 0.010669 15989000.0 1394.2 1394.4 921.57 1116.5 1827.4 1255.0 1210.1 1221.9 1374.0 1818.5 1629.1 True False 1629.5068750826274 1465.3690040360532 1052.262483544235 1390.042550121589 1558.5918807421424 1387.8032669984218 1429.9595062118876 1395.1080669118098 1062.7911938271345 1407.6995869968998 1224.549509127314 1.3306990553970415 1.1966596639121283 0.8593057901710639 1.135146059641325 1.2727879674321103 1.1333174009333866 1.167743317484126 1.1392826966269791 0.8679038176125211 1.1495652699253536 1.0 10.258035388599527 -8.746964978718422 23.711038942890667 0.9376212589360149 1.148992947288002 0.1522441995231717 0.13111005380848287 94.71230613466444 155151.1646869612 0.020398238215144495 0.023069614562111804 1.7907502533839243e-09 8.746964978718422 0.21137168835198716 EYEGYEVESSLKDAS(ph)FEKEATEAQSLEATCEK ddPTM_A549_PD325901_60min_R1 2 EYEGYEVESSLKDASFEKEATEAQSLEATCEK 32 2 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-5;Q96PC5-8 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 EYEGYEVES(0.001)S(0.001)LKDAS(0.999)FEKEATEAQSLEATCEK;EYEGYEVESSLKDAS(0.999)FEKEAT(0.001)EAQSLEATCEK 182.6 1.8814e-76 20327200.0 4494.7 4353.2 5339.299999999999 5005.299999999999 5010.9 4352.1 5000.2 4679.5 4670.1 5405.0 5313.3 True False 4950.998635176744 4720.059441556726 5701.657005819168 5314.466013138926 4658.9516706665445 4316.657940534159 5190.485347214426 4586.1637015032675 4473.83193771022 5063.727377576932 4659.7977837837825 1.062492164875984 1.0129322473998026 1.2235846425913766 1.1404928410484692 0.9998184227821683 0.9263616450388128 1.1138863933704268 0.9841980090773974 0.9600914342848248 1.0866839319076966 1.0 12.186051633820115 -6.806786132953465 7.496824540062318 0.9878631956580307 1.110991514560666 0.280819165311329 0.07134511446941773 0.1522059503844124 20.931390401980657 0.009323112111166005 0.017795852385186824 1.560320689022524e-07 6.806786132953465 0.1231283189026352 EYEMEEENEFLEYNHAES(ph)EQEYEEEQEPPKVESKPK ddPTM_A549_MK2206_60min_R1 1 EYEMEEENEFLEYNHAESEQEYEEEQEPPKVESKPK 36 2 Q68D10-2;Q68D10;Q68D10-3 Q68D10-2 SPTY2D1 Protein SPT2 homolog 1 EYEMEEENEFLEYNHAES(0.998)EQEY(0.002)EEEQEPPKVESKPK 106.86 1.1881999999999999e-14 6574700.0 910.48 1330.5 805.34 817.15 1640.0 1294.4 1297.4 1118.6 2032.2 1292.5 1839.5 True False 1064.1467649011834 1398.2167669750195 919.549321806823 1017.3517866832578 1398.7581724948627 1431.3725488468197 1533.1207861823846 1277.1649755688275 1571.9099447565534 1000.5233523197652 1382.7013823827242 0.7696143060675941 1.011221066811663 0.6650382602657272 0.7357711503333555 1.0116126231713667 1.0352000562697228 1.1087866156179376 0.9236737533074334 1.1368397868003703 0.7236004570962566 1.0 10.43327390053372 -6.8567784646719225 5.3755804076363445 1.0548280866846456 0.8022447920934518 0.25316835863075027 0.1376788179598533 0.10888186339351094 4.963422888098214 0.014099108226021223 0.027121685925055906 1.3906618324002953e-07 6.8567784646719225 -0.2525832945911938 EYEMEEENEFLEYNHAES(ph)EQEYEEEQEPPKVESKPK ddPTM_A549_PD325901_60min_R1 2 EYEMEEENEFLEYNHAESEQEYEEEQEPPKVESKPK 36 2 Q68D10-2;Q68D10;Q68D10-3 Q68D10-2 SPTY2D1 Protein SPT2 homolog 1 EYEMEEENEFLEY(0.015)NHAES(0.883)EQEY(0.102)EEEQEPPKVESKPK;EY(0.032)EMEEENEFLEY(0.316)NHAES(0.336)EQEY(0.316)EEEQEPPKVESKPK 88.24 2.3645e-09 18051900.0 2268.7200000000003 2253.3199999999997 2216.63 2246.6 2747.3 2449.6000000000004 2030.52 2406.5 2593.0 2285.0 2585.2 True False 2499.0387842566106 2443.2151844272285 2367.0638414790233 2385.3673796012063 2554.3391256704763 2429.6512697622934 2107.792549743178 2358.5004696372725 2484.0252274003956 2140.72471003946 2267.2367889330235 1.1022398703369112 1.0776180045918458 1.0440302720180272 1.0521033317934894 1.1266309448306742 1.0716354293570294 0.929674641851202 1.0402532638627473 1.0956179078980957 0.9441998826452085 1.0 11.146719357866852 -7.5501030886468135 24.999274857886505 1.036358038673739 1.0789943520399603 0.25973497613194985 0.051769060631614655 338.35148173645666 310696.11511912063 0.007892100198817548 0.011706029043836708 2.817714010027287e-08 7.5501030886468135 0.04263631336622131 EYFT(ph)FPASK ddPTM_A549_MK2206_60min_R1 2 EYFTFPASK 9 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 EYFT(0.999)FPAS(0.001)K;EYFT(1)FPASK 127.42 5.5125e-05 21558200.0 7652.299999999999 7732.1 8254.0 6303.400000000001 10338.5 7960.099999999999 7609.4 7446.6 11614.2 12227.699999999999 11639.1 True False 8943.821159227364 8125.630863530664 9424.541314467824 7847.733282970382 8817.720345328134 8802.432498513264 8991.929482330994 8502.178354256055 8983.602244066307 9465.454077493534 8748.790247181714 1.0222923291718504 0.9287719369141589 1.0772393723239384 0.8970078217955226 1.00787881480741 1.0061313907198575 1.027791183498496 0.9718118864485177 1.026839367529726 1.0819157632156837 1.0 13.094867824458088 -6.957700644270937 24.99929359005757 1.0102786656452296 0.9804270656758213 0.09558658412850385 0.050513462148853834 260.08087259785583 153708.86373913597 0.00584513356503193 0.011046257122698782 1.1022988535621451e-07 6.957700644270937 -0.029851599969408338 EYFT(ph)FPASK ddPTM_A549_PD325901_60min_R1 2 EYFTFPASK 9 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 EYFT(1)FPASK;EYFT(0.998)FPAS(0.002)K 140.07 4.3993000000000004e-05 33495000.0 9007.9 8929.099999999999 9460.4 10012.7 10850.9 9997.7 9928.0 10103.400000000001 10446.0 9958.2 10957.3 True False 9922.375376734508 9681.586593679172 10102.439634006647 10631.16173850841 10088.770217572814 9916.282045926871 10305.815472810056 9901.87976103603 10006.990946943517 9329.437552522963 9609.621564047584 1.0325459031453463 1.0074888515798406 1.0512838166076008 1.1063038921618629 1.0498613447295224 1.0319118166969856 1.0724475885051643 1.0304130807899732 1.0413511999663554 0.9708433875717987 1.0 13.230263902089618 -10.30799362355555 0.5666338831442954 0.9968262228613256 1.049404516099084 0.43602655527298373 0.025954924343267096 0.9005951414910204 0.4978254961431822 0.023269610412841278 0.00594072576681792 4.9204676000948156e-11 10.30799362355555 0.05257829323775831 EYGNISYDLHHEDS(ph)EDAEETSVPEAPK ddPTM_A549_MK2206_60min_R1 2 EYGNISYDLHHEDSEDAEETSVPEAPK 27 0 Q9H7F4 Q9H7F4 TMEM185B Transmembrane protein 185B 1 EYGNISYDLHHEDS(1)EDAEETSVPEAPK;EYGNIS(0.001)YDLHHEDS(0.988)EDAEET(0.006)S(0.006)VPEAPK 121.52 1.4911e-17 8880000.0 3999.6 4510.7 3317.0 3225.3 5469.6 4108.5 3901.8 4716.7 6477.4 5456.5 6439.0 True False 4674.634699168325 4740.275363242555 3787.4004773551924 4015.498644789219 4665.029085535308 4543.2587429984205 4610.70655428274 5385.306669287941 5010.2792422823 4223.872860296168 4840.018592640588 0.9658299053388483 0.9793919739172704 0.7825177537776534 0.8296452932835672 0.963845282046776 0.9386862170130087 0.9526216616798694 1.11266239296611 1.035177685040425 0.872697651764956 1.0 12.24079687419891 -7.698136144194987 1.6706731498612677 1.0236387829212361 0.8974281113465546 0.22393273340960096 0.07795734634834241 0.25997360587766416 1.4798065474954556 0.010801170794144208 0.017201821696472632 2.0038437567516096e-08 7.698136144194987 -0.12621067157468147 EYGS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 EYGSPLK 7 0 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;P21127-10;P21127-5;P21127-12;P21127-4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 EYGS(1)PLK;EYGS(1)PLK 96.331 0.011781999999999999 233620000.0 11543.599999999999 12045.7 10487.4 10158.1 16490.699999999997 12172.7 12763.7 14237.7 17478.4 15421.5 14960.8 True False 13491.877466076472 12658.77467865539 11974.671017851935 12646.834956014434 14064.939875098185 13460.807034415688 15082.699073991134 16255.937576127553 13519.57030726943 11937.772439303093 11245.620462925504 1.1997450483551722 1.1256626275436525 1.0648297314790198 1.1246009055443802 1.250703766987993 1.196982156635394 1.3412064833341732 1.4455349644530537 1.2022075928883311 1.0615485805038034 1.0 13.457075641740426 -10.35282304081667 1.0239856537331673 1.014585498373166 1.2136905344931401 0.32662771865912366 0.10149694418781657 0.42707840316618295 0.8744303656737024 0.05083893024745758 0.020573774877651378 4.437894351269573e-11 10.35282304081667 0.1991050361199742 EYGS(ph)PLK ddPTM_A549_PD325901_60min_R1 4 EYGSPLK 7 0 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;P21127-10;P21127-5;P21127-12;P21127-4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 EYGS(1)PLK;EYGS(1)PLK;EYGS(1)PLK;EYGS(1)PLK 101.64 0.010886 353671000.0 23621.200000000004 22501.5 23111.2 21961.699999999997 27655.6 22085.1 23922.0 23066.8 25237.7 23514.799999999996 26782.399999999998 True False 26019.206834991634 24397.780374021117 24679.66501093551 23318.22433036045 25713.166062640583 21905.246267891558 24832.36480062067 22606.71457844547 24177.047235465867 22030.071514939125 23488.334587621757 1.1077501786228656 1.0387190408501177 1.0507200891093222 0.9927576705523024 1.0947206991930072 0.9326010827279139 1.0572211796449464 0.9624656228440778 1.029321476381176 0.9379154334147161 1.0 14.51965680395291 -2.000000002751136 0.5854314765573532 1.010774638045743 6.305929375283193 0.30271684041290015 0.04700517825955203 118.5378073151343 0.8801012899071782 0.006221740295229736 802.2244946457943 0.009999999936652747 2.000000002751136 5.29515473723745 EYGS(ph)PLKAYT(ph)PVVVTQWYR ddPTM_A549_PD325901_60min_R1 2 EYGSPLKAYTPVVVTQWYR 19 1 Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 Q5QPR3 CDK11A Cyclin-dependent kinase 11A 2 EY(0.097)GS(0.869)PLKAY(0.045)T(0.925)PVVVT(0.057)QWY(0.005)R;EY(0.003)GS(0.997)PLKAY(0.004)T(0.975)PVVVT(0.021)QWYR 71.678 0.00044799 4183600.0 3415.3 2901.9 3500.3999999999996 3833.3 3732.5 3350.1 3021.7 3313.1 3720.6 3579.1000000000004 4078.3999999999996 True False 3762.018741789024 3146.4532972189354 3737.958193615159 4070.074234944049 3470.3420764259654 3322.8178963221158 3136.692447037685 3247.01762142333 3564.236120735025 3353.1150151869742 3576.782655107706 1.0517884659323087 0.8796881445188589 1.0450615969850143 1.1379148881556764 0.9702412506027612 0.928996312252039 0.8769591975510268 0.9078040055876848 0.9964922290274573 0.9374668070475766 1.0 11.804446739611114 EYGS(ph)TSSIDK ddPTM_A549_MK2206_60min_R1 1 EYGSTSSIDK 10 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 EYGS(0.928)T(0.027)S(0.034)S(0.011)IDK 75.73899999999999 0.0012709000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EYGS(ph)TSSIDK ddPTM_A549_PD325901_60min_R1 1 EYGSTSSIDK 10 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 EYGS(0.418)T(0.418)S(0.123)S(0.04)IDK 112.64 0.0001286 14645000.0 10892.0 11996.0 10527.0 12674.0 13480.0 10821.0 10861.0 11127.0 12562.0 10650.0 11954.0 True False 11997.747821733397 13006.945019965662 11241.425523993485 13456.844195257581 12533.211303475424 10732.877363691116 11274.321298367238 10905.063256037369 12034.062825531735 9977.557182459628 10483.733782649444 1.1444155365323796 1.2406786827696947 1.0722730810465655 1.2835927041116428 1.1954911831334234 1.0237647756235477 1.075410872892081 1.0401888756547046 1.1478794745292067 0.9517179078862593 1.0 13.35586500390188 -7.250569961806549 24.54629443925422 1.0665734140102616 1.189216565955768 0.5040145479390031 0.07014193155400988 427.9353064388117 966401.5471098361 0.01022129808317158 0.017591361732182988 5.616038006199066e-08 7.250569961806549 0.12264315194550646 EYGS(ph)TSSIDR ddPTM_A549_MK2206_60min_R1 1 EYGSTSSIDR 10 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 EYGS(0.499)T(0.499)S(0.002)S(0.001)IDR 130.95 1.1667e-06 27694000.0 5874.5 6310.2 6097.9 5118.8 7113.2 5531.9 5642.1 5725.9 8078.7 8424.9 8706.6 True False 6865.971982264308 6631.362226956614 6962.673913435106 6372.906229791661 6066.857702799064 6117.2819862219685 6667.196537474663 6537.56385983332 6248.887349032952 6521.709238652833 6544.510930064379 1.0491191863891909 1.0132708613096288 1.0638952227048406 0.973778835102193 0.9270146795735252 0.9347195002945456 1.0187463370023093 0.9989384890169339 0.954828774190997 0.9965159059775118 1.0 12.676069668561558 -6.274889338536953 24.395393981809285 0.9754630420329724 1.0392126662718795 0.5091287642348451 0.029054902559429604 363.77809855172313 659816.6890153614 0.00437615247919587 0.010224915314011805 5.310197347703859e-07 6.274889338536953 0.06374962423890707 EYGS(ph)TSSIDR ddPTM_A549_PD325901_60min_R1 2 EYGSTSSIDR 10 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 EYGS(0.5)T(0.5)S(0.001)SIDR;EYGS(0.499)T(0.499)S(0.001)SIDR 180.81 1.4353e-12 82019000.0 14569.0 14813.2 15270.6 15196.5 16617.800000000003 15799.0 14599.3 14981.0 16105.0 17378.3 18041.0 True False 16048.034154869061 16061.56035092993 16306.954745577554 16135.153291244425 15450.623056297776 15670.33818214175 15154.884350543505 14682.19220263285 15428.16285664613 16281.031172200766 15822.071371321623 1.0142814918631329 1.0151363860007858 1.0306460110611566 1.0197876695519323 0.9765234079466285 0.990410030038488 0.9578318789543934 0.9279563881405019 0.9751038593221445 1.0290075673474102 1.0 13.949650864411499 -6.757322614416199 24.30942248069074 0.9805044773399018 1.0203812319242351 0.39634830601699433 0.023972603023919722 57.25590020900574 338087.3966307917 0.0032500049200088455 0.006572450577982059 1.748547302689225e-07 6.757322614416199 0.039876754584333374 EYGSQEGKHDYDDS(ph)SEEQSAEDSYEASPGSETQR ddPTM_A549_MK2206_60min_R1 1 EYGSQEGKHDYDDSSEEQSAEDSYEASPGSETQR 34 1 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 EYGSQEGKHDYDDS(0.848)S(0.152)EEQSAEDSYEASPGSETQR 126.52 2.05e-22 6564300.0 367.05 280.26 437.4 262.89 813.87 428.85 354.52 595.96 768.93 743.4 907.29 True False 428.9990664890821 294.5240369127539 499.42989713450766 327.29806180158056 694.1508011270698 474.23062235240906 418.93169501879026 680.439155050955 594.7685827288929 575.4654236862768 681.984853069868 0.6290448600991612 0.43186301805236793 0.732318166431978 0.4799198403429196 1.0178390297122266 0.6953682625321079 0.6142829904990156 0.9977335302801005 0.8721140653661409 0.8438096844759712 1.0 9.413595887024677 -5.989373769951273 0.20510351545378347 1.0330925828986268 0.2142704388641111 0.4037402320496759 0.15257246327165108 5.370383567904729 0.2580969833383665 0.1527261121462538 1.1362142465089597 1.024769591872837e-06 5.989373769951273 -0.8188221440345157 EYGST(ph)SSIDK ddPTM_A549_MK2206_60min_R1 1 EYGSTSSIDK 10 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 EYGS(0.414)T(0.548)S(0.025)S(0.013)IDK 110.93 3.4310999999999995e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 EYGST(ph)SSIDR ddPTM_A549_MK2206_60min_R1 1 EYGSTSSIDR 10 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 EYGS(0.214)T(0.775)S(0.01)S(0.001)IDR 160.91 9.394899999999999e-09 33157000.0 5309.6 5709.3 5692.6 4417.2 7235.7 5347.8 5653.8 5928.7 8433.1 7846.2 8258.1 True False 6205.730672743308 5999.878983608029 6499.8962789846755 5499.414198295646 6171.338115073832 5913.700646417664 6681.022276027414 6769.1113808822665 6523.016314893455 6073.73797057744 6207.385858034671 0.999733352279169 0.9665709721978937 1.047122964101126 0.8859468903769457 0.9941927658783802 0.9526877789888203 1.0763020744682208 1.0904930893123894 1.0508475651550226 0.9784695376582332 1.0 12.599770112902894 -7.749041979445926 24.99745963677527 1.0342303370591202 0.9742089870700869 0.31940175734720766 0.046876669779232855 226.41297665915147 456525.66071769356 0.007009567211098767 0.01035589218795706 1.7822064888213353e-08 7.749041979445926 -0.0600213499890333 EYIPGQPPLSQS(ph)S(ph)DSSPTR ddPTM_A549_MK2206_60min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.143)QS(0.843)S(0.41)DS(0.153)S(0.385)PT(0.066)R 100.58 2.9091000000000002e-09 3643900.0 1075.8 1427.4 766.51 519.0 1879.0 1446.0 965.32 1075.5 1517.9 1238.1 1249.7 True False 1257.3687392152417 1500.0485630816554 875.2126439244885 646.1550232987956 1602.6015890962478 1599.0147602228828 1140.706148695529 1227.9554185806137 1174.098073588215 958.4123501022059 939.3650000346241 1.3385305383625068 1.596875083728226 0.9317066783329472 0.68786363476921 1.706047797221716 1.7022294424041184 1.2143375031574346 1.3072186195305897 1.2498848408711616 1.0202768360188847 1.0 9.875542030744116 -10.12956816054223 0.7233576981438895 1.0081285235683752 1.308413030542621 0.13149127719733433 0.29171237571130143 1.1134009679852739 1.134498214985068 0.1708111477693743 0.06402457857859332 7.420477275860041e-11 10.12956816054223 0.3002845069742457 EYIPGQPPLSQS(ph)S(ph)DSSPTR ddPTM_A549_PD325901_60min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.399)QS(0.534)S(0.487)DS(0.339)S(0.21)PT(0.03)R 65.225 0.0023336 15657000.0 1364.9 1363.4 1049.5 1387.4 1067.7 1446.0 1250.7 1515.4 1234.2 1303.9 1625.5 True False 1503.4636432137258 1478.2985028527157 1120.725381156185 1473.0965469859846 992.7084353650382 1434.2242554197715 1298.2960729093008 1485.1741581916974 1182.330866046113 1221.5715314750341 1425.5738048934809 1.0546375347617059 1.0369848953300418 0.7861573896133184 1.0333358693386308 0.6963570963196911 1.0060680481758268 0.9107182444379369 1.041807974510776 0.8293719076399955 0.8568981327250961 1.0 10.47732701716663 -5.561605819860336 24.702260868718703 0.9171524989839523 1.0502246891955989 0.20278509490447405 0.10493048290301162 141.3075809156705 90133.45640283586 0.013703465384759085 0.0530735128894418 2.7440636455715806e-06 5.561605819860336 0.1330721902116465 EYIPGQPPLSQS(ph)SDSS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.133)QS(0.864)S(0.033)DS(0.238)S(0.671)PT(0.06)R 116.51 6.7762e-14 15302000.0 1602.7 1996.3 1496.4 1565.1 1878.3 1927.7 2100.5 2297.7 1586.8 2020.1 1529.2 True False 1765.4049241546186 2164.535207015458 1597.9547025841964 1661.7726724000036 1746.374687783226 1912.0014503268972 2180.4356769377046 2251.870570989219 1520.1123142456413 1892.550541247578 1341.1180943974846 1.3163679854366224 1.613978079975056 1.1915093154433198 1.2390949606466815 1.3021781564790595 1.425677170649084 1.6258342095647398 1.6790993875903986 1.1334664117917015 1.411173668563343 1.0 10.38922056642356 -8.930376938685743 7.758740855804213 1.0583823240076926 1.4195085135975276 0.186605068049421 0.18703024725472991 0.14548025913535545 13.967438990734289 0.02882470814484838 0.03053886820412645 1.1738782645135586e-09 8.930376938685743 0.361126189589835 EYIPGQPPLSQSS(ph)DS(ph)SPTR ddPTM_A549_MK2206_60min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.078)QS(0.415)S(0.515)DS(0.519)S(0.42)PT(0.054)R 78.441 0.00038591 5060600.0 1037.7 1163.8 1003.1 956.67 1807.5 858.8 1311.5 963.44 1800.2 1286.1 1681.4 True False 1212.8383906708093 1223.0324490082887 1145.3546635016562 1191.054192946549 1541.619144380772 949.6776459746977 1549.782573669028 1100.0105704112561 1392.4575743286807 995.569116764758 1263.8619757207466 0.9596288312884483 0.9676946316157871 0.9062339761020907 0.9423926155127206 1.2197685934032694 0.751409302770678 1.2262277079625157 0.8703565670483516 1.101748134747546 0.7877198110948876 1.0 10.303623202436622 EYIPGQPPLSQSSDS(ph)SPTR ddPTM_A549_MK2206_60min_R1 2 EYIPGQPPLSQSSDSSPTR 19 0 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQSS(0.001)DS(0.517)S(0.482)PTR;EYIPGQPPLSQSSDS(0.604)S(0.396)PTR 315.26 1.1168999999999996e-164 411840000.0 23015.1 23703.9 23905.2 22366.0 30159.0 25217.5 22523.8 25343.4 36573.0 35690.0 34049.5 True False 26899.48621482869 24910.327262457096 27295.316819798427 27845.671004047894 25722.651051385707 27885.999111978257 26616.08290721041 28935.904560907384 28289.273895079914 27627.604212218495 25594.069431606713 1.0510046589781414 0.9732851326758828 1.0664703748162379 1.087973566628706 1.0050238833696452 1.0895492483716243 1.0399316520702093 1.130570683111993 1.105305819798427 1.0794533587574207 1.0 14.643521932242791 -5.789367895001839 24.98989914722976 1.0584518720505711 1.0121448376908053 0.18058367500850914 0.04196826562127904 299.1959488953032 267714.86264440697 0.0067719990882837795 0.021062055061615837 1.6241723209581747e-06 5.789367895001839 -0.0463070343597658 EYIPGQPPLSQSSDS(ph)SPTR ddPTM_A549_PD325901_60min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQSS(0.003)DS(0.871)S(0.126)PTR 355.76 1.1645999999999993e-255 348280000.0 12135.0 12768.0 12019.0 13619.0 14838.0 13536.0 12504.0 14124.0 13248.0 14020.0 14636.0 True False 13366.936266685165 13844.00416929989 12834.681616118329 14460.214699006861 13795.83006832109 13425.767303846496 12979.846562451337 13842.285739936351 12691.232631160987 13134.774807331827 12835.864785248234 1.0413740320829237 1.0785408229923295 0.9999078231852937 1.1265477582488583 1.0747877372606875 1.0459573646550262 1.0112171466131816 1.078406945813636 0.9887321846632829 1.0232870965131324 1.0 13.647892876815362 -8.770313363518502 24.995513236499022 0.9946790820484108 1.0569059185905325 0.3170885675597458 0.03395125511991596 124.69187728970074 351220.8562781988 0.005454013296668339 0.005848274013940519 1.6970187332357419e-09 8.770313363518502 0.06222683654212169 EYIPGQPPLSQSSDSS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQSSDS(0.275)S(0.725)PTR 313.44 4.287199999999998e-163 377850000.0 9156.7 8144.3 9100.1 8820.3 10350.0 9310.3 9394.0 10154.0 10231.0 9681.9 9893.4 True False 10086.281443193735 8830.648743423337 9717.687509346739 9365.109898645294 9623.05170556162 9234.480003620125 9751.493810594038 9951.470504341096 9801.026649260875 9070.583181676613 8676.574519429818 1.1624727501166618 1.0177574944637995 1.1199912462672352 1.0793556694146533 1.1090841995320062 1.0643002008385873 1.1238875190614808 1.1469354042953646 1.1295963202198085 1.0454106239005352 1.0 13.082909868895225 -10.801389803577353 1.050735403335149 1.0000569727932114 1.1047960738541305 0.37227325656368004 0.040362243996970505 0.33244817906991747 0.6522268748896909 0.025538702825938706 0.006395720768976816 1.5798294174946548e-11 10.801389803577353 0.1047391010609191 EYPLS(ph)PDGHLHR ddPTM_A549_MK2206_60min_R1 2 EYPLSPDGHLHR 12 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 EY(0.001)PLS(0.999)PDGHLHR;EYPLS(1)PDGHLHR 94.09 8.0758e-05 6033700.0 722.98 945.78 602.22 687.88 948.96 650.22 549.5 812.39 967.0699999999999 891.8 728.76 True False 845.0013488360623 993.9161622470001 687.6238515142737 856.4106308801067 809.369241079711 719.0258488188957 649.3370371567906 927.5487703400316 748.0301890934555 690.3417606180009 547.7887792472051 1.542567830610367 1.8144149714291018 1.2552718813613453 1.5633957162412546 1.477520664428324 1.312596891464283 1.1853784921427883 1.6932598941050037 1.3655449279582375 1.2602334819028207 1.0 9.09747590435725 -13.283063058147727 0.14751993701685961 6.112788598026379e-15 1.6526313580094443 0.31421624954402827 0.18779711400298632 20.944666785357082 0.3292853604569012 6.837197983986426 0.3923497220368302 5.211190408200895e-14 13.283063058147727 1.652631358009438 EYPS(ph)PPPS(ph)PLRR ddPTM_A549_MK2206_60min_R1 2 EYPSPPPSPLRR 12 1 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 2 EY(0.01)PS(0.99)PPPS(1)PLRR;EY(0.004)PS(0.997)PPPS(1)PLRR 53.169 0.0057758 14685600.0 1671.3600000000001 2024.4 1743.35 1431.73 2760.4 2775.2 1952.56 2299.3999999999996 3646.1000000000004 2947.1 3123.0 True False 1953.4447071712107 2127.433313088485 1990.5832445574858 1782.503914272802 2354.3488166797692 3068.8698219713324 2307.314877653981 2625.3469916171643 2820.2641716252683 2281.348063150157 2347.472909584803 0.8321479234947662 0.9062653308594577 0.8479685692771466 0.7593288540177757 1.0029290677080411 1.3073078753927443 0.9828930797169776 1.1183715820096551 1.2014043527872225 0.9718314762378487 1.0 11.196892793581318 -6.962633822362048 6.388614865568118 1.1052120617951793 0.8450844582051021 0.60581078408505 0.09793818065400561 0.09886153449461553 11.18879362250752 0.01456529947701703 0.027539661512908806 1.0898486175467838e-07 6.962633822362048 -0.26012760359007714 EYPS(ph)PPPS(ph)PLRR ddPTM_A549_PD325901_60min_R1 2 EYPSPPPSPLRR 12 1 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 2 EY(0.024)PS(0.976)PPPS(1)PLRR;EY(0.008)PS(0.992)PPPS(1)PLRR 51.888000000000005 0.0064494 17719400.0 2889.8999999999996 3662.8 3541.1000000000004 3720.3 3888.1000000000004 3480.4 3798.1000000000004 3748.7 4145.5 3950.8 4717.4 True False 3183.2805205680606 3971.4770105977195 3781.420340364141 3950.0944815856687 3615.0132692168245 3452.056776322941 3942.6387739000684 3673.9292377017414 3971.279051364575 3701.3458137522553 4137.189706062451 0.7694306393307093 0.9599455893400529 0.9140069972674975 0.954777218892665 0.8737847490820998 0.8343965400630416 0.9529751000111752 0.88802532606086 0.9598977406197358 0.8946521858372776 1.0 12.014435396869075 -9.00341871920336 0.9447495790957257 0.9905910461409261 0.8941579196807751 0.06981255919071261 0.06131038644313529 0.36554395981296234 0.6750681889927147 0.012620158831771904 0.011680538515005275 9.921590103266285e-10 9.00341871920336 -0.09643312646015101 EYQDLLNVK ddPTM_A549_MK2206_60min_R1 2 EYQDLLNVK 9 0 P08670;B0YJC4;B0YJC5;P17661;E7ESP9;P07197;E7EMV2;P12036-2;P07196;P07197-2;Q16352;P12036 P08670 VIM;DES;NEFM;NEFH;NEFL;INA Vimentin;Desmin;Neurofilament medium polypeptide;Neurofilament heavy polypeptide;Neurofilament light polypeptide;Alpha-internexin 0 ; 150.85 6.0437e-05 13026900.0 10602.900000000001 11713.1 10027.1 9688.4 15665.1 11556.599999999999 10774.7 10785.6 16127.0 15652.7 15732.7 False True 12392.410303983357 12309.246759304855 11449.093556372702 12062.05843492881 13360.784541432495 12779.511741349772 12732.323520024154 12314.491829514696 12474.260249527078 12116.744198727725 11825.836389569276 1.0479098387420458 1.0408774782443262 0.9681423942640647 1.0199750814722828 1.1297961599753812 1.0806433744188837 1.0766531093948184 1.0413210046078794 1.0548311204888416 1.0245993433001523 1.0 13.52965460221874 -4.1677681725597004 2.815532789833697 1.0372419169639524 3.551312523251484 0.0 0.0415193137520688 4611.678563033718 174.4478265274862 0.006264013176234489 73998.65739512542 6.795662899369846e-05 4.1677681725597004 2.5140706062875315 EYS(ph)SSR ddPTM_A549_PD325901_60min_R1 1 EYSSSR 6 0 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-4;K7EP11 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 EYS(0.978)S(0.022)SR 77.282 0.04471 13688000.0 3468.5 3283.6 2804.7 3355.6 3641.4 2769.5 2491.9 3023.9 3338.7 4202.3 4402.4 True False 3820.619566625253 3560.3204957952 2995.043808031207 3562.8677908794666 3385.6406261480265 2746.946110224798 2586.730618120003 2963.585942296342 3198.386049642 3936.966060830995 3860.932709112925 0.9895587036799369 0.9221400019202115 0.7757306417079044 0.9227997635053472 0.8768970819296926 0.7114721537987972 0.6699755766306328 0.7675829043333019 0.8283972528433035 1.0196930010042935 1.0 11.914733694918272 -10.450625878700423 0.9391938633761518 0.9932010226530731 0.8266104888956907 0.35637391490402004 0.0920254138278181 0.5216482594899057 0.8709407460513904 0.05305061928411723 0.018173016262758974 3.5430242210858023e-11 10.450625878700423 -0.16659053375738242 EYTINIHK ddPTM_A549_MK2206_60min_R1 2 EYTINIHK 8 0 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2;B8ZZK4 H7C2W9 RPL31 60S ribosomal protein L31 0 ; 94.302 0.0027285 8406500.0 3548.0 3413.6 3407.2 3407.8 5207.8 4054.0 2941.3999999999996 3069.6000000000004 4936.5 4483.5 4277.7 False True 4146.815659728276 3587.3376593355347 3890.39219368243 4242.711152981956 4441.739518730947 4482.991589172591 3475.8143059016993 3504.725200255743 3818.390631970635 3470.6742360740145 3215.4290314860455 1.2896616965020622 1.1156637649930055 1.209913873261399 1.3194852417629448 1.3813831607653764 1.394212574830404 1.080979947579597 1.089971249850909 1.1875213523857262 1.0793813833515102 1.0 11.650795532418032 -9.93510556075881 0.37795959102173293 0.9710337709566739 1.2654908507706941 0.3991948533133032 0.0993946452916572 1.1717367997135881 0.32221581369793634 0.1368844125616631 0.04278867381953242 1.1611663433921579e-10 9.93510556075881 0.29445707981402025 EYTINIHK ddPTM_A549_PD325901_60min_R1 2 EYTINIHK 8 0 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2;B8ZZK4 H7C2W9 RPL31 60S ribosomal protein L31 0 ; 94.302 0.0027285 11980900.0 9206.5 10858.7 11152.4 9810.4 12725.5 11610.5 11447.900000000001 11774.599999999999 12661.9 13302.6 13118.3 False True 10141.137102532915 11773.800757610969 11909.268928829188 10416.36612696504 11831.704780591732 11515.947937449002 11883.556099031248 11539.746366004993 12129.764375943345 12462.671565764082 11504.832263755246 0.8814676190005387 1.0233787410098172 1.035153634212302 0.9053905253169745 1.0284117585848047 1.0009661743377845 1.0329186750917814 1.0030347337057437 1.0543190980851482 1.0832553904350615 1.0 13.489952329298974 EYVNS(ph)TSEESHDEDEIRPVQQQDLHR ddPTM_A549_MK2206_60min_R1 4 EYVNSTSEESHDEDEIRPVQQQDLHR 26 1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 1 EYVNS(0.835)T(0.137)S(0.024)EES(0.004)HDEDEIRPVQQQDLHR;EY(0.01)VNS(0.463)T(0.25)S(0.25)EES(0.027)HDEDEIRPVQQQDLHR;EY(0.005)VNS(0.491)T(0.491)S(0.013)EESHDEDEIRPVQQQDLHR;EY(0.039)VNS(0.265)T(0.232)S(0.232)EES(0.232)HDEDEIRPVQQQDLHR 114.57 2.279e-16 57547600.0 1290.8 1252.74 1283.41 1147.67 1571.39 848.1899999999999 915.04 968.073 1713.3400000000001 1760.9399999999998 2117.85 True False 1508.655482969916 1316.4991151148333 1465.4168364915374 1428.849201520864 1340.2406126077467 937.9449028170453 1081.2909235303907 1105.3003123492235 1325.2712256417642 1363.1424309740555 1591.9293953135364 0.9476899461818034 0.8269833567936247 0.9205287877751125 0.8975581490782428 0.8418970191474989 0.5891875013918652 0.6792329651764654 0.694314908439473 0.8324937208542136 0.8562832214713766 1.0 10.636560636065104 -10.13980812977069 0.9746256997684303 0.9836048352680576 0.8009417749849669 0.12209503155300172 0.11133572593054172 0.4713299161760462 0.8930024289611664 0.04680101460545476 0.021920254266527356 7.247560848025975e-11 10.13980812977069 -0.18266306028309076 EYVNS(ph)TSEESHDEDEIRPVQQQDLHR ddPTM_A549_PD325901_60min_R1 4 EYVNSTSEESHDEDEIRPVQQQDLHR 26 1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 1 EY(0.001)VNS(0.805)T(0.167)S(0.027)EES(0.001)HDEDEIRPVQQQDLHR;EYVNS(0.961)T(0.038)S(0.001)EESHDEDEIRPVQQQDLHR;EY(0.001)VNS(0.358)T(0.276)S(0.276)EES(0.088)HDEDEIRPVQQQDLHR;EY(0.018)VNS(0.468)T(0.468)S(0.043)EES(0.002)HDEDEIRPVQQQDLHR 245.43 3.9873999999999992e-112 59337000.0 2427.86 2772.4300000000003 2114.54 3442.78 2387.46 2948.71 2832.4399999999996 2539.0299999999997 6044.079999999999 3656.91 3384.1400000000003 True False 2674.334559903933 3006.072405943932 2258.0454001619814 3655.4327014793225 2219.7730458898686 2924.696683401683 2940.2300541706413 2488.3870548194986 5790.06833645437 3426.0120785078343 2967.91223383096 0.9010827643147389 1.0128575810557967 0.7608194657587002 1.2316512125295958 0.7479240863617458 0.9854390739939454 0.9906728442489734 0.8384301349799372 1.9508893391300157 1.154350873133995 1.0 11.535232714326668 -8.724436755183783 24.97835770124485 1.4490314757545313 0.9378663420312908 0.35428639978205034 0.2551251778382668 146.74600434556956 99059.74354413027 0.05849052554251729 0.06632119869242492 1.886093614837861e-09 8.724436755183783 -0.5111651337232405 EYVNSTS(ph)EESHDEDEIRPVQQQDLHR ddPTM_A549_MK2206_60min_R1 3 EYVNSTSEESHDEDEIRPVQQQDLHR 26 1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 1 EYVNS(0.009)T(0.134)S(0.723)EES(0.134)HDEDEIRPVQQQDLHR;EYVNS(0.026)T(0.165)S(0.806)EES(0.002)HDEDEIRPVQQQDLHR;EYVNS(0.005)T(0.03)S(0.965)EESHDEDEIRPVQQQDLHR 124.8 4.7275e-18 28417500.0 1503.98 1590.3000000000002 1788.99 1629.96 1710.88 1281.6799999999998 1169.8 1458.81 2191.27 2031.52 2621.94 True False 1757.8150552193151 1671.2394772794992 2042.6956828410207 2029.3002731716858 1459.2118183890316 1417.306526889672 1382.3375178635363 1665.6007849182556 1694.9508437391455 1572.5982210480847 1970.8399361372967 0.8919116276203054 0.8479833631517572 1.036459453345844 1.0296626509146993 0.7404009791119723 0.7191383231595612 0.7013951222100855 0.8451223026171838 0.8600144601601316 0.7979329991304434 1.0 10.944594895788267 EYVNSTS(ph)EESHDEDEIRPVQQQDLHR ddPTM_A549_PD325901_60min_R1 3 EYVNSTSEESHDEDEIRPVQQQDLHR 26 1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 1 EYVNS(0.005)T(0.033)S(0.962)EESHDEDEIRPVQQQDLHR;EY(0.001)VNS(0.099)T(0.396)S(0.416)EES(0.087)HDEDEIRPVQQQDLHR;EYVNS(0.011)T(0.115)S(0.873)EESHDEDEIRPVQQQDLHR 184.25 1.5964e-57 33430600.0 1708.69 1774.4099999999999 1841.05 1717.4099999999999 1965.72 2227.8999999999996 1687.27 1644.8600000000001 1740.93 1951.49 2123.5 True False 1882.154950928906 1923.9457579924367 1965.994724133009 1823.490515178896 1827.6546085658536 2209.75672105789 1751.47998315957 1612.0519769322918 1667.7647663471553 1828.272588356632 1862.3229619755823 1.0106490599956333 1.0330892102363836 1.0556679825541377 0.9791483821068864 0.9813843494831036 1.1865593488219381 0.9404813337540401 0.8656135427886262 0.8955292934679618 0.9817161822550751 1.0 10.862887569823677 EYVNSTSEES(ph)HDEDEIRPVQQQDLHR ddPTM_A549_MK2206_60min_R1 2 EYVNSTSEESHDEDEIRPVQQQDLHR 26 1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 1 EYVNSTSEES(1)HDEDEIRPVQQQDLHR;EYVNSTSEES(1)HDEDEIRPVQQQDLHR 274.79 9.622399999999998e-140 24638000.0 2878.4 2956.5 2011.4 2684.2 3313.4 2761.2 2324.0 2793.6000000000004 4001.7000000000003 3842.8 3912.0 True False 3364.2035498765117 3106.9732217674905 2296.646765195127 3341.829120498318 2826.003249234439 3053.388351263781 2746.2407176567444 3189.60135504119 3095.3213394017803 2974.7088110594927 2940.542434292587 1.1440758380641582 1.0565986688489812 0.7810282682581442 1.1364668917972167 0.9610482801668179 1.0383758845494577 0.933923172007349 1.0846982916634968 1.0526361746404889 1.0116190728514771 1.0 11.521866594512979 -8.288879109415406 24.580177006783046 1.0300386408628512 1.0049256951692456 0.01939912863448101 0.09643247058327631 2765.3933994016475 2477196.3397130286 0.015015332324171071 0.018157235098947896 5.141867611314385e-09 8.288879109415406 -0.02511294569360567 EYVNSTSEES(ph)HDEDEIRPVQQQDLHR ddPTM_A549_PD325901_60min_R1 2 EYVNSTSEESHDEDEIRPVQQQDLHR 26 1 Q8NBU5 Q8NBU5 ATAD1 ATPase family AAA domain-containing protein 1 1 EYVNSTSEES(1)HDEDEIRPVQQQDLHR;EYVNSTSEES(1)HDEDEIRPVQQQDLHR 298.18 5.975199999999999e-171 56597000.0 5968.299999999999 6021.700000000001 6785.5 6024.4 8749.900000000001 7111.8 6237.7 6124.7 6729.1 7405.1 6751.5 True False 6574.197422369758 6529.169792157985 7246.004834526242 6396.5135055948995 8135.33720951629 7053.883858709775 6475.079086900408 6002.538053765798 6446.299328075596 6937.540722237724 5921.108301284736 1.1102984589799376 1.1026938640425332 1.2237581996184796 1.0802899018427028 1.373955144132581 1.1913114065451658 1.0935586308217795 1.0137524511185507 1.0886980950300988 1.1716625282352036 1.0 12.531651526582982 -7.92169104074445 3.7990931982951603 1.041251716786976 1.1826934360328099 0.25682211328998517 0.08652671807195125 0.17150237619479183 4.906255145852791 0.012521224090850016 0.017481768287120517 1.1975922013816486e-08 7.92169104074445 0.14144171924583393 EYVSNDAAQS(ph)DDEEK ddPTM_A549_MK2206_60min_R1 1 EYVSNDAAQSDDEEK 15 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 EYVSNDAAQS(1)DDEEK 139.65 2.417e-10 2848100.0 874.79 1338.5 717.14 740.25 1046.6 1028.9 1182.9 864.46 1411.3 891.07 1047.4 True False 1022.4331654379079 1406.6239328042564 818.8412355533623 921.611283231085 892.6465264226364 1137.7775150714556 1397.8176182943903 986.999852297719 1091.642803382996 689.7766681250083 787.3016732305874 1.2986548869412275 1.7866390744888965 1.0400603268037731 1.1705948489216034 1.133804940055291 1.4451607989129978 1.7754536359088786 1.2536488691148042 1.386562280381782 0.8761275271962801 1.0 9.620772734122735 -10.617102725290074 0.8132230361594324 0.9908692396870996 1.3680052587354705 0.3263227813098025 0.23130235623101272 0.752601244690517 0.8549712764933644 0.17588818239486204 0.04346338144916759 2.414889564069411e-11 10.617102725290074 0.3771360190483709 EYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_A549_MK2206_60min_R1 2 EYVSNDAAQSDDEEKLQSQPTDTDGGR 27 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 EYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;EYVSNDAAQS(1)DDEEKLQSQPTDTDGGR 362.34 9.252699999999994e-283 289590000.0 12773.3 13115.5 12553.6 11960.4 17486.4 13463.8 11954.3 13986.8 18770.8 19894.0 18963.9 True False 14929.120762797962 13783.022929170149 14333.889247068482 14890.698536922755 14914.173724094017 14888.53037945287 14126.241571034428 15969.471732778546 14519.243770808147 15399.931583016938 14254.64025298599 1.0473165578254902 0.966914821037518 1.005559522560795 1.0446211389869013 1.046267984277602 1.0444690371147105 0.9909924993073982 1.120299877749166 1.0185626233371081 1.0803451584680321 1.0 13.79914400972099 -4.932061495497983 20.50624444348478 1.0190597449175758 1.746014651545178 0.0 0.04274385874885939 668.9837873692173 378283.13393004774 0.005107001929708699 19276.14047377669 1.1693338032473643e-05 4.932061495497983 0.7269549066276022 EYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_A549_PD325901_60min_R1 2 EYVSNDAAQSDDEEKLQSQPTDTDGGR 27 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 EYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;EYVSNDAAQS(1)DDEEKLQSQPTDTDGGR 322.51 1.0984999999999995e-210 430500000.0 10449.5 10034.7 9260.8 10720.9 11772.5 9993.900000000001 11386.3 11722.4 12069.2 10342.7 12105.900000000001 True False 11510.325547484681 10880.359385782709 9889.29357771433 11383.105644069512 10945.640212920209 9912.512991866983 11819.611877322439 11488.587535955094 11561.973495773578 9689.66015690378 10616.951045622885 1.0841460507845246 1.0248101681007957 0.931462670894715 1.0721633353261522 1.0309589039155298 0.933649684289886 1.1132774208462968 1.0820985692207334 1.0890107193760024 0.9126593986602768 1.0 13.374081894947091 -7.779000362837572 24.999980502270745 1.0516004288214051 1.0132257623981569 0.022979951246794417 0.06746749474996984 473.5494652366849 674148.7910493556 0.009048033968982091 0.012516800772411053 1.6634112606487225e-08 7.779000362837572 -0.03837466642324827 FAADAVK ddPTM_A549_MK2206_60min_R1 2 FAADAVK 7 0 P37837 P37837 TALDO1 Transaldolase 0 ; 97.602 0.032188 3391300.0 5261.5 6506.0 6355.9 6454.2 8432.8 6793.799999999999 6772.0 6525.6 9353.7 8191.6 8007.200000000001 False True 6149.5125686754045 6837.127610627191 7257.2621929520255 8035.4792897400475 7192.346290862607 7512.71540664054 8002.384741812166 7450.623783811856 7235.101884789577 6341.111870686716 6018.791252522397 1.0217188652452804 1.1359635720480985 1.205767385587696 1.3350652901232423 1.1949818475343181 1.2482099962333897 1.329566752868937 1.2378937017776446 1.2020855320007051 1.0535523836333813 1.0 12.55525806581848 -10.382269405722708 0.8002035908875558 1.0029295694543787 1.2178758166036998 0.4191997330818267 0.08321684478521622 0.4311432861143851 0.5113420299101804 0.05276564491215601 0.016811248121449077 4.146967141811116e-11 10.382269405722708 0.2149462471493211 FAADAVK ddPTM_A549_PD325901_60min_R1 2 FAADAVK 7 0 P37837 P37837 TALDO1 Transaldolase 0 ; 105.12 0.027427999999999998 6094100.0 4025.0 4186.3 4557.4 4572.299999999999 5045.799999999999 4634.4 5085.8 4917.1 4770.9 4918.9 5233.9 False True 4433.615036951606 4539.094192821129 4866.6925698725045 4854.720586553279 4691.400415065009 4596.65898293042 5279.342902056548 4819.024583109671 4570.395664251659 4608.3198145352735 4590.163480425711 0.9658948000127469 0.9888741898142926 1.060243843302319 1.057635660964091 1.0220551915135512 1.0014150917570601 1.1501426745626324 1.0498590308732827 0.9956934396218456 1.0039554874650953 1.0 12.164329821351153 -8.769026404203906 24.461055503382457 0.9979663418978323 1.0389576036513144 0.11483854309636887 0.04559681136023891 193.30166919960016 623215.4830686819 0.008018567528084249 0.008621862836536395 1.7020550238332502e-09 8.769026404203906 0.04099126175348211 FADEHVPGS(ph)PFTVK ddPTM_A549_MK2206_60min_R1 2 FADEHVPGSPFTVK 14 0 O75369-8;O75369;O75369-9;O75369-2;O75369-7;E7EN95;O75369-4;O75369-5;A0A0C4DGA1 O75369-8 FLNB Filamin-B 1 FADEHVPGS(0.901)PFT(0.099)VK;FADEHVPGS(0.986)PFT(0.014)VK 59.185 0.0026629 4143300.0 1040.17 1245.98 1137.93 1248.12 1552.19 1373.02 1496.1599999999999 1284.46 1716.65 1767.21 1951.23 True False 1215.725266285108 1309.3950599891282 1299.3055849251728 1553.9094560302349 1323.864907173659 1518.3120650630876 1767.9929053912704 1466.536138493774 1327.8315159267477 1367.9960336193515 1466.6857397915974 0.8288928113924743 0.8927577493016201 0.8858786512165805 1.059469942246136 0.902623425902926 1.0351993094845429 1.205434032270939 0.9998980004415637 0.9053278967009118 0.9327124390080531 1.0 10.518344068957116 -6.103135204737158 6.869051741547254 0.9829316068622026 0.8676538926568393 0.3260059385364006 0.08302560408288036 0.27459866877050787 15.765046550690483 0.012549652143989431 0.03363675148940596 7.886145675858565e-07 6.103135204737158 -0.11527771420536326 FADEHVPGS(ph)PFTVK ddPTM_A549_PD325901_60min_R1 2 FADEHVPGSPFTVK 14 0 O75369-8;O75369;O75369-9;O75369-2;O75369-7;E7EN95;O75369-4;O75369-5;A0A0C4DGA1 O75369-8 FLNB Filamin-B 1 FADEHVPGS(0.839)PFT(0.161)VK;FADEHVPGS(0.997)PFT(0.003)VK 66.335 0.0013106 6356600.0 1649.6399999999999 1755.21 1662.3400000000001 1577.58 1810.38 2271.56 2204.1000000000004 1734.0500000000002 2364.5 1829.03 2024.6100000000001 True False 1817.1102383992175 1903.1277066100315 1775.15638886248 1675.0235336558667 1683.2251542719462 2253.0611684933165 2287.978231629798 1699.463012414091 2265.1282877702424 1713.5447336557884 1775.595805060222 1.0233805651154868 1.0718248495442262 0.9997525246475073 0.9433585779388884 0.9479776588089298 1.2689043092309518 1.2885692932532007 0.9571226782417699 1.2757004050780676 0.9650533802639115 1.0 10.794087489997787 -7.240063294989697 24.921535725395746 1.1406685080932064 0.9985454692992115 0.22320458456687853 0.11772883762172154 934.070185797801 1088996.167541213 0.018709758441036672 0.0323859233011048 5.7535607762351064e-08 7.240063294989697 -0.1421230387939949 FADLSEAANR ddPTM_A549_MK2206_60min_R1 2 FADLSEAANR 10 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 162.49 1.8775e-08 13860700.0 4006.2 4640.9 4804.1 4309.1 6029.200000000001 3971.8 4303.5 4625.5 7648.0 6648.5 7060.9 False True 4682.348617813814 4877.101987113392 5485.3936187103045 5364.829693442849 5142.312666832944 4392.093239732539 5085.390244593715 5281.178789999653 5915.740211346378 5146.599232416216 5307.483659073759 0.8822163041065225 0.9189104103552765 1.033520585472249 1.0108047500572235 0.9688796041871113 0.8275283584196714 0.9581546682484176 0.9950438153438054 1.1146035657090971 0.9696872497416941 1.0 12.37381230896334 -8.489534516849712 3.982300020318546 1.0543022560244777 0.9454824004412142 0.22968977510693311 0.06421550272255339 0.18919439989071185 6.529952148081294 0.01156059332359503 0.013719250422143467 3.239406752600143e-09 8.489534516849712 -0.10881985558326346 FADLSEAANR ddPTM_A549_PD325901_60min_R1 2 FADLSEAANR 10 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 211.85 7.292699999999999e-26 40418000.0 8292.0 8759.900000000001 8700.4 8468.3 9926.8 9486.7 8230.1 9140.5 9097.8 8806.7 10011.599999999999 False True 9133.797735752232 9498.12751587172 9290.861463755384 8991.367658095298 9229.575813600875 9409.443460505365 8543.300959183525 8958.185556916464 8715.451104451733 8250.643459039176 8780.236668761356 1.0402678287988283 1.0817621294497108 1.0581561539008109 1.0240461615442682 1.0511761996619289 1.071661712033643 0.9730148834802131 1.0202669808193463 0.9926214330258182 0.939683492632222 1.0 13.100044112377912 -7.757373005569058 24.99998879235264 0.9969840532680808 1.0543796026547156 0.6524661386011553 0.024532652754995117 39.51755437057569 242952.36660125272 0.002568560085642453 0.003734616865266055 1.7483444306599766e-08 7.757373005569058 0.057395549386634825 FADQDDIGNVS(ph)FDR ddPTM_A549_MK2206_60min_R1 2 FADQDDIGNVSFDR 14 0 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5;Q5H9R7-3 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 FADQDDIGNVS(1)FDR;FADQDDIGNVS(1)FDR 194.77 3.6294000000000003e-31 9045000.0 2780.6000000000004 3038.3999999999996 2692.2 2795.8999999999996 3658.5 3785.2 3519.5 3241.4 4510.0 3581.3 4134.299999999999 True False 3249.897300856948 3193.0415819443047 3073.994442308007 3480.895625512718 3120.3394963856463 4185.747351587591 4158.947592854094 3700.8783763711776 3488.492200990087 2772.2818426791273 3107.639209124705 1.0457769007787463 1.0274814311033404 0.9891735286651329 1.1201093149076158 1.004086795926519 1.3469219140038284 1.338298081914567 1.1908970531407228 1.1225537992786019 0.892086132308765 1.0 11.601603304038152 -6.270431631589101 23.56682334375574 1.1086984248573453 1.021477704487482 0.10438433812195025 0.130695730414668 613.2607267862145 1607234.6376354753 0.01892735009374566 0.04466537290640875 5.364983225496727e-07 6.270431631589101 -0.08722072036986317 FADQDDIGNVS(ph)FDR ddPTM_A549_PD325901_60min_R1 1 FADQDDIGNVSFDR 14 0 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5;Q5H9R7-3 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 FADQDDIGNVS(1)FDR 205.28 6.952399999999999e-32 14917000.0 3147.5 3963.1 3369.1 3395.2 4515.3 3733.6 3636.3 3895.3 3552.1 3206.0 4446.7 True False 3467.0318829329635 4297.084345500658 3597.747386044116 3604.9137929413396 4198.160904939362 3703.1947994711327 3774.6813863597085 3817.6051856962645 3402.817589760489 3003.5726128606157 3899.7840899537673 0.8890317522614607 1.1018775004930081 0.9225504035754882 0.9243880455402537 1.0765111114110761 0.9495896988274125 0.9679206077289417 0.9789273194715564 0.8725656372942509 0.7701894626931061 1.0 11.929178536591936 -8.602799746278613 24.99999240760501 0.9390817232470774 0.9792005522841518 0.11204222458906643 0.08340869733438383 69.52110754616471 21742.51277289139 0.011885235222032822 0.013476590203147521 2.4957452528831644e-09 8.602799746278613 0.04011882903707442 FADQHVPGS(ph)PFSVK ddPTM_A549_MK2206_60min_R1 2 FADQHVPGSPFSVK 14 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 FADQHVPGS(0.994)PFS(0.006)VK;FADQHVPGS(0.996)PFS(0.004)VK 64.507 0.0015723 6643000.0 1675.44 1972.87 1741.59 1286.85 2336.0 2291.8 1609.98 1740.23 2531.9 2345.0 2845.2 True False 1958.2133114247863 2073.2806561909106 1988.5736500925625 1602.1283077688906 1992.3774944804886 2534.316754826282 1902.4925260813275 1986.9129317308602 1958.4286926134814 1815.262871326769 2138.6583164747617 0.9156270061187659 0.9694305257739274 0.9298229804985446 0.7491277570742317 0.9316015929859269 1.1850031093343139 0.8895729212216021 0.9290464570357224 0.9157277146737679 0.8487858286399584 1.0 11.062490292876547 -6.998811534991147 24.99959122993651 0.968583808578338 0.8920004872307136 0.10257686907243868 0.09590351081553515 65.06724224191699 1368635.0510429104 0.013031469744609399 0.02449183161763492 1.0027402895613199e-07 6.998811534991147 -0.07658332134762447 FADQHVPGS(ph)PFSVK ddPTM_A549_PD325901_60min_R1 2 FADQHVPGSPFSVK 14 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 FADQHVPGS(1)PFSVK;FADQHVPGS(0.968)PFS(0.032)VK 81.317 0.00014 20914800.0 2501.0 2517.3999999999996 2410.5 2381.1 3297.8 2699.1 2474.82 2605.3999999999996 3315.9 2805.8 3083.2 True False 2754.8996788611116 2729.550132816068 2574.0910255140393 2528.1751391295434 3066.173904792378 2677.119424483754 2569.0006293734677 2553.433253103239 3176.544254352865 2628.6413091591758 2703.9859460151215 1.0188291410763515 1.0094542602333494 0.9519616880063637 0.9349808725357203 1.133945947208422 0.9900641045967857 0.9500791352704394 0.9443219395671222 1.174763596324957 0.9721357143268509 1.0 11.400871937884633 -8.742811561346478 24.999040288113527 1.0825272713576737 0.9923799134961049 0.06148173196591844 0.07234339016738783 278.30628401423235 373494.3966551149 0.013484526910661624 0.0152771708884212 1.8079584218370515e-09 8.742811561346478 -0.0901473578615688 FADS(ph)DQDRDPHR ddPTM_A549_MK2206_60min_R1 4 FADSDQDRDPHR 12 1 E9PCT3;P51636-3;P51636;P51636-2 E9PCT3;P51636-2 CAV2 Caveolin;Caveolin-2 1 FADS(1)DQDRDPHR;FADS(1)DQDRDPHR;FADS(1)DQDRDPHR;FADS(1)DQDRDPHR 86.944 0.00011879 32217400.0 3388.32 3945.6 3208.2599999999998 3134.79 4533.14 4139.610000000001 3470.92 4330.74 5000.16 4556.61 4730.03 True False 3960.185579529457 4146.414186979809 3663.2395102440687 3902.813690726072 3866.3211110142447 4577.660782549276 4101.541235683801 4944.635657335011 3867.631743614765 3527.268636296914 3555.4330088131314 1.1138405841744263 1.1662191853149153 1.0303216236007566 1.097704184286938 1.0874402924849071 1.2875114708116473 1.1535982327657384 1.390726711789634 1.0878089206090404 0.9920784972051493 1.0 11.795809558044157 -9.17525480824273 3.144798219401128 1.0327829219686073 1.1629269467005772 0.2922556805382899 0.09670962833617544 0.23069126930189537 4.731616405061581 0.019032131275369752 0.018169942400172317 6.679519034004296e-10 9.17525480824273 0.13014402473196984 FADS(ph)DQDRDPHR ddPTM_A549_PD325901_60min_R1 4 FADSDQDRDPHR 12 1 E9PCT3;P51636-3;P51636;P51636-2 E9PCT3;P51636-2 CAV2 Caveolin;Caveolin-2 1 FADS(1)DQDRDPHR;FADS(1)DQDRDPHR;FADS(1)DQDRDPHR;FADS(1)DQDRDPHR 83.633 0.00023133 34498300.0 4202.49 4450.98 4248.15 3677.22 5911.219999999999 3828.3599999999997 4383.49 4822.77 4723.72 4538.610000000001 4536.98 True False 4629.123691090376 4826.0797053156675 4536.455005201188 3904.35352782745 5496.03629980193 3797.1831054487134 4550.306110687767 4726.5760689601275 4525.198475578791 4252.041390035974 3978.960222285836 1.1634003439298104 1.212899711408318 1.1401106700672374 0.9812497008538763 1.3812745020719415 0.9543154224515732 1.1435917567614444 1.1878922645385985 1.1372816572112276 1.068631288702167 1.0 11.958175761125803 -10.655593851291695 0.5671219744473417 0.9776408833708539 1.1473482021629684 0.11912086505115904 0.10892343033288857 1.4742802876867063 0.6850375316675202 0.1305003296443112 0.022231477293096304 2.210070607139564e-11 10.655593851291695 0.16970731879211454 FADSDQDRDPHR ddPTM_A549_MK2206_60min_R1 2 FADSDQDRDPHR 12 1 E9PCT3;P51636-3;P51636;P51636-2 E9PCT3;P51636-2 CAV2 Caveolin;Caveolin-2 0 ; 97.911 0.00090023 8944300.0 1208.45 1224.84 1003.23 977.1099999999999 1323.76 865.44 933.55 1322.36 1716.9299999999998 1669.7 1591.9099999999999 False True 1412.406816234114 1287.1791242853685 1145.5030994564518 1216.5019938641344 1129.0366575742678 957.020286367422 1103.1639509330698 1509.808579557657 1328.0480963738155 1292.5136103429875 1196.594812519098 1.180355122266228 1.0757017419919868 0.9573024113692363 1.0166365265307538 0.9435413272412528 0.799786424238863 0.9219193827279466 1.2617542410861486 1.1098561371647426 1.0801597974689185 1.0 10.224718998405907 FAEAFEAIPR ddPTM_A549_MK2206_60min_R1 2 FAEAFEAIPR 10 0 P50990-2;P50990;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 90.65700000000001 0.0018207999999999998 2369500.0 1700.4 2166.04 1512.3400000000001 1718.49 2265.4 1716.9 1835.89 1796.6 2930.7 2706.3 2643.5 False True 1987.3859492113754 2276.28218409513 1726.812552886148 2139.520127145948 1932.162660957234 1898.5812184140161 2169.447448854923 2051.2735518567442 2266.901129366217 2094.94495039302 1987.045993111569 1.000171086175652 1.145560893902933 0.8690350192559386 1.076734073877986 0.9723794354309878 0.9554792516105661 1.0917952862569258 1.0323231364386285 1.1408397879187564 1.054301187619965 1.0 10.956409550941688 -7.776540849780063 24.999223609670025 1.0668135138866772 1.0055358426669863 0.14458343438975352 0.07314782490234253 387.08486426576314 640785.1548623325 0.012152934565344503 0.01682527510041023 1.6728582797901807e-08 7.776540849780063 -0.061277671219690966 FAEAFEAIPR ddPTM_A549_PD325901_60min_R1 2 FAEAFEAIPR 10 0 P50990-2;P50990;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 107.15 0.00075849 2419500.0 2369.3 1992.29 2308.0 2324.1 2610.4 2661.6 2592.8 2812.7 2853.1 2720.5 2756.5 False True 2609.829591813528 2160.1872702423634 2464.634759131466 2467.6543785859367 2427.0545093911155 2639.9248120506672 2691.4704228345995 2756.5984919795364 2733.194128922511 2548.7271657165666 2417.4679748931912 1.0795715264558308 0.89357430695139 1.0195108207132957 1.0207599042526976 1.0039655269883556 1.0920205932272193 1.1133427415738628 1.1402833545711515 1.1306020006503992 1.054296144638348 1.0 11.239281062567386 -7.24861080693037 18.937625960892994 1.0758625355619444 0.9992215350547328 0.3572071755534183 0.05522520389714882 36.01298044835958 53159.63861906907 0.009784661321361993 0.016812128373491362 5.6414298619377206e-08 7.24861080693037 -0.07664100050721168 FAFQEDDS(ph)FEKENR ddPTM_A549_PD325901_60min_R1 1 FAFQEDDSFEKENR 14 1 Q6P444;H0YEA6 Q6P444 MTFR2 Mitochondrial fission regulator 2 1 FAFQEDDS(1)FEKENR 118.72 7.9672e-07 4472400.0 2462.0 2811.3 2942.4 2928.4 3689.8 3089.2 2867.8 2789.3 3043.0 2888.2 3260.1 True False 2711.9404275713937 3048.218117258209 3142.0889580885746 3109.280617121059 3430.6411771189623 3064.0425794209964 2976.935698320376 2733.6652233364816 2915.1132923175496 2705.838559096704 2859.1283674766164 0.9485199959611724 1.0661354530046785 1.098967431413963 1.0874924863430389 1.1998905736949288 1.0716701685294499 1.041203932003841 0.9561183941346205 1.0195811162163186 0.9463858250914416 1.0 11.481359679365086 -7.896837016658409 3.5335134262736734 1.0053068971544017 1.0850600514753213 0.3441598929044597 0.05939497254052237 0.22637448679085156 5.546959690948699 0.008969063550168832 0.012619499112811012 1.2681276833467124e-08 7.896837016658409 0.07975315432091956 FAGDKGYLTK ddPTM_A549_MK2206_60min_R1 1 FAGDKGYLTK 10 1 P60903 P60903 S100A10 Protein S100-A10 0 65.179 0.0057498 8633600.0 5277.2 6083.1 5524.8 5053.4 7356.8 4765.2 4682.1 4400.3 8248.2 7491.4 7803.0 False True 6167.862344847253 6392.703806979141 6308.299715794989 6291.483226855749 6274.624465494032 5269.450301116238 5532.776963915936 5024.056000353576 6379.995869668829 5799.087536996736 5865.299748155694 1.051585189109337 1.0899193701036822 1.0755289561762966 1.072661841167464 1.0697875189528119 0.8984110833846441 0.943306770579915 0.8565727611676381 1.0877527396063564 0.9887111973808708 1.0 12.517989124224894 -7.048326256650519 24.99219418874562 1.0088499836817093 1.073561730977339 0.2952463963127471 0.06546739252805159 605.6879777885076 313233.8870736704 0.01150501615528176 0.019927584576083048 8.946923899511684e-08 7.048326256650519 0.06471174729562978 FAGDKGYLTK ddPTM_A549_PD325901_60min_R1 2 FAGDKGYLTK 10 1 P60903 P60903 S100A10 Protein S100-A10 0 ; 99.5 0.00047733 38736000.0 13366.4 13378.900000000001 13084.5 14293.9 14628.5 17634.8 15197.1 15634.9 15987.3 15459.5 16507.8 False True 14723.347088176382 14506.386856253637 13972.492853490328 15176.801739197748 13601.044625585337 17491.188035599305 15775.433956672216 15323.049654158232 15315.40937833334 14483.38453166522 14477.445251566056 1.0169851677790822 1.001999082309391 0.9651214430929307 1.0483066228522633 0.9394644144217422 1.20816813544553 1.089655922198411 1.0584083992651054 1.0578806627969557 1.0004102436580462 1.0 13.821519420639351 FAGGLHFS(ph)GPK ddPTM_A549_MK2206_60min_R1 2 FAGGLHFSGPK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FAGGLHFS(1)GPK;FAGGLHFS(1)GPK 73.46600000000001 0.00045957 14438100.0 1535.1 2164.11 2131.56 3036.2 2964.7 1849.4299999999998 2640.8 2523.1000000000004 2510.1000000000004 2291.5 2453.2 True False 1794.1873504083642 2274.253955338827 2433.847260027506 3780.069136300198 2528.596557314343 2045.1354550477222 3120.5991769311245 2880.7571516696844 1941.5663578060348 1773.8485584841317 1844.00273512438 0.97298518935621 1.2333246106521778 1.3198718275563404 2.049925992135379 1.3712542336027427 1.1090739813408008 1.692296392781997 1.5622304114832966 1.0529086106128114 0.9619554920912217 1.0 10.848625080314074 -8.806648719011363 9.024165822452765 1.024524882588096 1.4235114197665562 0.30157145130226937 0.2764461838362059 0.28553516658783523 53.38358384999599 0.048402920314709136 0.05155787630885008 1.5608144639834083e-09 8.806648719011363 0.3989865371784602 FAGGLHFS(ph)GPK ddPTM_A549_PD325901_60min_R1 2 FAGGLHFSGPK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FAGGLHFS(1)GPK;FAGGLHFS(1)GPK 92.925 8.9744e-05 28351000.0 2375.8999999999996 3660.3 2742.3 4111.9 3483.1 2213.98 3306.5 2580.3 2455.1 2820.9 3001.7 True False 2617.0996189548637 3968.766326823968 2928.4089687895244 4365.882724197542 3238.459072042675 2195.950080922729 3432.330666886227 2528.833892293808 2351.920684840229 2642.7878925821938 2632.509929344056 0.994146152986009 1.5075978565493455 1.112401870225499 1.6584487205658485 1.2301792429894476 0.8341659252430227 1.303824395352409 0.9606170385552615 0.8934137944263171 1.0039042448135034 1.0 11.36222325750412 -7.089202266168153 5.887348564802991 0.9726140946768642 1.3316881035491446 0.3616966833021622 0.19943052003834794 0.15793951799542377 8.378397268878253 0.026966321119983337 0.047251930997463755 8.143249360139927e-08 7.089202266168153 0.35907400887228036 FAGGLHFS(ph)GPKVEGGVK ddPTM_A549_MK2206_60min_R1 2 FAGGLHFSGPKVEGGVK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FAGGLHFS(1)GPKVEGGVK;FAGGLHFS(1)GPKVEGGVK 64.2 0.0011550999999999998 7146900.0 955.5600000000001 1213.8600000000001 1295.76 1270.3 1697.2200000000003 1221.44 1234.52 1361.06 1905.07 1888.96 2255.55 True False 1116.8351668010012 1275.6402891847408 1479.5182521970962 1581.5235570259333 1447.5611862937387 1350.6919700737476 1458.8163041142868 1553.9944230714364 1473.5746867716591 1462.242624060304 1695.4346849868737 0.658730871021226 0.7523971878601841 0.8726483333733088 0.9328130249017395 0.8537994409999616 0.7966641133593447 0.8604379260564563 0.9165758119921131 0.8691427041219626 0.8624588354883308 1.0 10.727439491637897 -2.0000000000000004 0.06798998513150123 1.1584743658451975 0.1288416287819513 0.40566692738193155 0.06730586363531231 117.86265954133624 0.5766406273738167 1.5473028132019395 11.65660064855899 0.00999999999999999 2.0000000000000004 -1.029632737063246 FAGGLHFS(ph)GPKVEGGVK ddPTM_A549_PD325901_60min_R1 2 FAGGLHFSGPKVEGGVK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FAGGLHFS(1)GPKVEGGVK;FAGGLHFS(1)GPKVEGGVK 66.874 0.00088688 18790100.0 2402.3 2719.9 2517.8 2755.2 3561.7 3706.6 2804.0 3113.4 3629.9 2796.4 3384.1 True False 2646.179727520212 2949.1155184898817 2688.6730487613536 2925.3824464868 3311.5384791979554 3676.4146785193125 2910.7077544076756 3051.300794584951 3477.347926317278 2619.834826763392 2967.877153577379 0.8916068929371272 0.9936784327259359 0.905924642305534 0.9856817836818624 1.1157936490755147 1.2387354625132938 0.9807372757660157 1.0281088591914984 1.1716616781546367 0.8827302112574071 1.0 11.535215661798496 -6.603271333808602 4.510944955456746 1.0849276119372484 0.9377235165167233 0.2376886472162908 0.09571020577048182 0.17079701658731866 6.456378278072124 0.012263838823700671 0.026354103043324213 2.4930366677980527e-07 6.603271333808602 -0.14720409542052515 FAGHSEAGGGS(ph)GDR ddPTM_A549_MK2206_60min_R1 4 FAGHSEAGGGSGDR 14 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 FAGHS(0.002)EAGGGS(0.998)GDR;FAGHS(0.001)EAGGGS(0.999)GDR;FAGHS(0.045)EAGGGS(0.955)GDR;FAGHS(0.002)EAGGGS(0.998)GDR 89.01299999999999 7.4255e-05 32100000.0 3335.8599999999997 3766.48 3108.4399999999996 3248.0599999999995 4481.92 3109.8399999999997 3418.29 3171.74 4562.860000000001 5273.889999999999 5508.3 True False 3898.8716140533184 3958.1777440631904 3549.2635332619775 4043.8348458109513 3822.6355051635232 3438.921204655276 4039.3490459375544 3621.343858046373 3529.3794953901606 4082.514586124322 4140.437088653852 0.9416570112217134 0.9559806511515145 0.8572195295487323 0.9766685881769289 0.9232444361100888 0.8305696067883852 0.9755851760208333 0.8746283980428144 0.8524171288731356 0.9860105343254082 1.0 12.015567359717128 -11.03209705494937 1.3475549602836494 0.9996224878191627 0.9039143573436291 0.2961904053442328 0.04874282056077129 0.3980680028347275 1.2964301237963036 0.034147646500435794 0.0078055041432658805 9.28758807094496e-12 11.03209705494937 -0.09570813047553361 FAGHSEAGGGS(ph)GDR ddPTM_A549_PD325901_60min_R1 2 FAGHSEAGGGSGDR 14 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 FAGHS(0.004)EAGGGS(0.996)GDR;FAGHS(0.045)EAGGGS(0.955)GDR 98.943 3.6806e-05 13157500.0 4006.2 3934.8999999999996 4290.799999999999 4149.1 4896.6 4526.0 4716.6 4888.9 4427.8 4635.8 5426.0 True False 4412.9064747914335 4266.507832532753 4581.999490676469 4405.380483710216 4552.679708352952 4489.141756590518 4896.092794022555 4791.387054232142 4241.714964089269 4343.094796849424 4758.636398247943 0.9273468501220639 0.896582019610411 0.9628807723917486 0.9257653064924669 0.9567193891992207 0.943367255006781 1.0288856689755117 1.00688236150933 0.8913719412668308 0.9126763285483388 1.0 12.216332508758141 -6.013630118590699 1.117928693809088 0.957959735897703 0.911113887855817 0.14178259447389618 0.04047476021617066 1.319080941523365 2.5684099327501744 0.007380686868179525 0.05268520898241236 9.691028737336173e-07 6.013630118590699 -0.04684584804188596 FAGHSEAGGGS(ph)GDRR ddPTM_A549_MK2206_60min_R1 1 FAGHSEAGGGSGDRR 15 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 FAGHS(0.108)EAGGGS(0.892)GDRR 42.813 0.031521 2851000.0 409.62 362.16 277.56 333.4 459.61 369.75 333.27 368.24 498.92 539.1 593.23 True False 478.75384175250764 380.59239708957034 316.9221816384407 415.0830149668946 392.0019778416856 408.87669957981416 393.82084508324556 420.4391476877036 385.9154166115242 417.3169355787894 445.9146186849163 1.073644643372402 0.8535095759183828 0.7107239107188325 0.9308576072052768 0.8790964938484659 0.916939437387512 0.8831754523874888 0.9428691728646517 0.8654468825212757 0.9358673568709932 1.0 8.800623686933879 -10.895116856313576 0.8039160514921945 1.0112651857090307 0.888401600992089 0.07817178525326562 0.0837237102604507 1.0644706232045973 1.0263761643775076 0.08803623649193174 0.014649903534090113 1.2731604635942128e-11 10.895116856313576 -0.1228635847169417 FAGHSEAGGGS(ph)GDRR ddPTM_A549_PD325901_60min_R1 2 FAGHSEAGGGSGDRR 15 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 FAGHSEAGGGS(1)GDRR;FAGHSEAGGGS(1)GDRR 101.01 3.0484e-06 21640000.0 2269.52 2011.91 2233.1 2097.61 2212.66 2129.22 2220.2 2078.16 1995.4 2397.03 2394.1 True False 2499.9199996676807 2181.4607164987597 2384.651594721179 2227.1746056820457 2057.250394862607 2111.880338260642 2304.690925940056 2036.7094685150178 1911.5402771904173 2245.6811167203 2099.6408774503143 1.190641707596893 1.0389684921489064 1.135742602619247 1.0607407340947759 0.9798106033069885 1.0058293115464538 1.0976595810702365 0.9700275367987135 0.9104129652456016 1.0695548657098584 1.0 11.035926875111935 -6.131382440532038 0.4583663462948172 0.9604249217513537 1.1967718452170668 0.35207392148481675 0.06165396587054184 1.4167132740775612 0.3216840462988624 0.013446035024894913 0.1570959679693545 7.389542639542854e-07 6.131382440532038 0.23634692346571307 FAGVDIR ddPTM_A549_MK2206_60min_R1 2 FAGVDIR 7 0 P62249;M0R210;M0R1M5;M0R3H0;M0QX76;Q6IPX4 P62249 RPS16 40S ribosomal protein S16 0 ; 80.377 0.011763 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FAGVDIR ddPTM_A549_PD325901_60min_R1 1 FAGVDIR 7 0 P62249;M0R210;M0R1M5;M0R3H0;M0QX76;Q6IPX4 P62249 RPS16 40S ribosomal protein S16 0 75.311 0.050385 9063300.0 1665.3 1685.3 1758.5 1898.5 1959.0 1553.5 1949.6 2031.1 1973.7 1930.9 1739.8 False True 1834.3600300709336 1827.3261455608645 1877.8423847195331 2015.7660331936659 1821.4065981831136 1540.8488110612832 2023.7930948620547 1990.5881171328735 1890.7522527266347 1808.9826444705454 1525.8156295008794 1.2022160440648944 1.1976061263434654 1.2307138217831781 1.3211072125752557 1.1937265308908438 1.0098525544435022 1.3263680458720115 1.3046059292131051 1.2391747837483695 1.1855840309240344 1.0 10.575364930665152 -10.619353282527884 0.871082892404764 0.9981013465461783 1.2248668383534065 0.12031092110935526 0.09814953533883214 0.41290503066519657 0.5525239267423616 0.059629719627210614 0.015718778322604602 2.402407734927064e-11 10.619353282527884 0.22676549180722816 FAGVFHVEK ddPTM_A549_MK2206_60min_R1 2 FAGVFHVEK 9 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;P16070-15;P16070-9;H0YCV9;H0YDW7;H0Y5E4;P16070-19;Q86UZ1;E9PKC6 P16070 CD44 CD44 antigen 0 ; 61.961999999999996 0.036004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FAIGS(ph)AR ddPTM_A549_MK2206_60min_R1 1 FAIGSAR 7 0 B7ZBF2;A0A087X102;H0Y4V6;B7ZBF7;B7ZBF6;O96017-8;O96017-13;O96017-7;O96017-4;O96017-12;O96017;O96017-9 B7ZBF2 CHEK2 Serine/threonine-protein kinase Chk2 1 FAIGS(1)AR 53.166000000000004 0.056928999999999993 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FAIGS(ph)AR ddPTM_A549_PD325901_60min_R1 2 FAIGSAR 7 0 B7ZBF2;A0A087X102;H0Y4V6;B7ZBF7;B7ZBF6;O96017-8;O96017-13;O96017-7;O96017-4;O96017-12;O96017;O96017-9 B7ZBF2 CHEK2 Serine/threonine-protein kinase Chk2 1 FAIGS(1)AR;FAIGS(1)AR 78.77 0.016623 6302600.0 1927.38 2086.98 2152.6 1920.83 2234.59 1964.94 1975.0 2070.3 2143.23 2284.7 2263.7 True False 2123.0461987378358 2262.8571288569483 2298.6883806353544 2039.475306578556 2077.640107316999 1948.9381801137815 2050.1597057614686 2029.0062423810696 2053.1574963830903 2140.4436520906575 1985.2792507766071 1.0693942415946456 1.1398180522824473 1.157866521667492 1.0272989584617622 1.0465228539029268 0.981694731031612 1.0326807702037288 1.0220256125617377 1.034190779750471 1.0781574689068818 1.0 10.955126236803618 -6.323279528217649 6.774431038992672 1.0181895859139418 1.123928858407821 0.6306964613102471 0.03160590376193325 0.08141386324521044 7.486988406790557 0.0036376515019389327 0.008544454859990353 4.750293808002375e-07 6.323279528217649 0.10573927249387927 FAILKES(ph)PR ddPTM_A549_MK2206_60min_R1 2 FAILKESPR 9 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 FAILKES(1)PR;FAILKES(1)PR 71.555 0.00085052 11187900.0 2926.3999999999996 2966.2 3255.1 2932.5 4505.5 2857.8 3409.7 3155.0 4694.5 4725.700000000001 3850.2 True False 3420.304776389184 3117.1669103354393 3716.722126571869 3650.9626316449276 3842.746918399761 3160.210499145888 4029.1983541283157 3602.230911782272 3631.2032455760436 3658.161087858813 2894.0890798858172 1.1818242915052664 1.077080499007454 1.2842459316140011 1.2615239306279307 1.32779151309032 1.0919534305663356 1.3922164255867628 1.2446855685328089 1.2546964330895123 1.2640112266354777 1.0 11.498893613280739 -10.645770119623178 0.8567624944777131 0.9958566829936558 1.236376371710981 0.0 0.11673424729482597 0.4158609012354083 0.529626090881356 0.06390911973512503 0.016037952087879632 2.2606320493733356e-11 10.645770119623178 0.2405196887173252 FAILKES(ph)PR ddPTM_A549_PD325901_60min_R1 1 FAILKESPR 9 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 FAILKES(1)PR 53.528 0.006042100000000001 9723200.0 1817.7 2057.5 1715.8 1658.0 2102.0 2191.1 1886.2 1859.5 2158.7 1931.4 2122.9 True False 2002.231565879984 2230.8927457968775 1832.244505943574 1760.4108944087955 1954.36277150633 2173.25640805689 1957.9803731682443 1822.4108137504707 2067.9773460814645 1809.4510743852145 1861.796758171868 1.0754297197541645 1.1982471964273005 0.9841270256280219 0.9455440754647004 1.049718645672879 1.1672898228649027 1.0516617157991084 0.9788451965830732 1.1107428010090903 0.9718843189747238 1.0 10.8624798752917 -11.102495522394664 1.4356028138635157 0.9999457750202041 1.0671765322660127 0.1270124068531241 0.07398073265603879 0.8548211204544436 3.1451394400845087 0.05482488565669212 0.011894173441931118 7.897769920118495e-12 11.102495522394664 0.06723075724580863 FAIQDIS(ph)VEETSAK ddPTM_A549_MK2206_60min_R1 2 FAIQDISVEETSAK 14 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;A0A494C1A0;P35609;P35609-2;G3V2W4;G3V2X9;G3V5M4;A0A087WSZ2;Q08043;G3V2E8;A0A494C033;A0A494C166;O43707 P12814-4;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 1 FAIQDIS(1)VEETSAK;FAIQDIS(1)VEETSAK 170.11 1.5717e-22 23770000.0 3125.3 3299.3999999999996 2406.62 2405.2 3560.6000000000004 2937.3 2633.7 2776.3 3493.7000000000003 3451.3 3793.3 True False 3652.7742337510654 3467.32536712317 2747.914904073727 2994.47410797353 3036.8404566982986 3248.12313637806 3112.2091988350107 3169.849027062164 2702.3825282924768 2671.6489329680494 2851.3189202459303 1.2810823117029675 1.216042632938482 0.9637346718958802 1.0502066558430625 1.0650651651539444 1.1391651468078865 1.0914981052230308 1.1117132512096404 0.9477657897557782 0.9369870602681007 1.0 11.477413698517017 -2.0000000000000004 0.3185083898749752 0.9880468649613627 3.592421263973997 0.49724497419143066 0.07467626718403134 29.77487270331461 0.37176538922101127 0.024173121836369917 45.850766765578925 0.00999999999999999 2.0000000000000004 2.6043743990126345 FAIQDIS(ph)VEETSAK ddPTM_A549_PD325901_60min_R1 2 FAIQDISVEETSAK 14 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;A0A494C1A0;P35609;P35609-2;G3V2W4;G3V2X9;G3V5M4;A0A087WSZ2;Q08043;G3V2E8;A0A494C033;A0A494C166;O43707 P12814-4;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 1 FAIQDIS(1)VEETSAK;FAIQDIS(0.498)VEET(0.498)S(0.004)AK 255.71 8.527099999999999e-70 45515000.0 14684.2 14994.6 14673.2 15832.3 18378.3 16114.7 16429.3 17347.2 15846.5 16924.7 15274.7 True False 16174.929174063307 16258.24756555327 15669.011589119516 16810.22521323786 17087.471609693053 15983.467226011755 17054.526001957915 17001.196487384866 15180.526712688148 15856.071553612628 13396.008734301124 1.2074439107110033 1.2136635536764953 1.1696776181548956 1.2548681884772492 1.2755643825417762 1.1931514485419317 1.2731050225645928 1.2691240222807922 1.1332126616055185 1.1836414762116716 1.0 13.709515601355328 -9.50154556666224 0.8745328932387462 1.0221329213029782 1.2316398762096537 0.3333231465347155 0.06262756217174721 0.15322399678016105 0.24909003547761982 0.013653863909067867 0.009338439475366438 3.151043751829031e-10 9.50154556666224 0.20950695490667548 FAKEFMDRHGIPT(ph)AQWKAFTK ddPTM_A549_PD325901_60min_R1 1 FAKEFMDRHGIPTAQWKAFTK 21 3 C9JZG2;C9JKQ7;C9JBJ1;C9JTV6;F8WD69;P22102-2;P22102 C9JZG2 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase 1 FAKEFMDRHGIPT(1)AQWKAFTK 40.669000000000004 0.044313 1600200000.0 2406.2 2513.0 2442.1 3067.8 3117.5 3614.9 3297.0 3597.3 3261.6 3209.9 3783.7 True False 2650.475652649181 2724.779329374266 2607.8355915402753 3257.2910385206874 2898.5375547911453 3585.4614529162736 3422.469139187627 3525.549029472745 3124.5262945195277 3007.2263661950374 3318.328886850485 0.798738082639186 0.8211299790601609 0.7858882227962166 0.9816058472770219 0.8734931508076721 1.0805021368208416 1.0313833426065204 1.06244713820966 0.9415963278688446 0.9062472312831162 1.0 11.6962411667105 -6.370273222863825 1.6989269715099558 0.9876076684976808 0.7967048612759738 0.6265924133091607 0.06152824101593921 0.1789616141777572 0.9869613733614255 0.008530057478871655 0.027806581531512792 4.263112339671936e-07 6.370273222863825 -0.19090280722170694 FALKVDS(ph)PDVK ddPTM_A549_MK2206_60min_R1 1 FALKVDSPDVK 11 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 FALKVDS(1)PDVK 48.70399999999999 0.0083023 1625300.0 769.54 849.87 1135.8 1061.9 1735.2 1054.6 926.84 1054.0 1617.8 1261.2 1513.0 True False 899.4195385533536 893.1247529117323 1296.873518896603 1322.0655476705022 1479.9543786055406 1166.197072013177 1095.2348307887164 1203.4077277396239 1251.3708830957348 976.2940440585586 1137.2803433243064 0.7908512125729017 0.7853162662612285 1.1403287909696924 1.162479906938392 1.3013100835626747 1.0254262098686644 0.9630297729294348 1.0581451924351608 1.1003187476519098 0.8584462483584481 1.0 10.151372211777483 -5.753130885622778 24.998512212413967 1.0711381425279969 0.7880835683533693 0.4935003687766434 0.10922076690627329 98.65515891075168 296825.4790925168 0.01333583064944514 0.04995513869030452 1.7655056607305397e-06 5.753130885622778 -0.28305457417462754 FALKVDS(ph)PDVK ddPTM_A549_PD325901_60min_R1 2 FALKVDSPDVK 11 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 FALKVDS(1)PDVK;FALKVDS(1)PDVK 69.108 0.0010432 7131900.0 4085.4 3832.9 4428.700000000001 4382.8 5236.4 4326.6 4501.4 4864.6 4875.2 5117.9 4695.9 True False 4500.14680048748 4155.91193456372 4729.25821393654 4653.515601939003 4868.613328599313 4291.365604079659 4672.7032402605955 4767.571736795129 4670.312297964681 4794.754920573721 4118.334069762719 1.0927104805625345 1.0091245304932648 1.1483425418688824 1.1299509760768678 1.182180281183411 1.0420149340451414 1.1346100537516173 1.157645702372517 1.1340294932008186 1.1642462314500812 1.0 12.007845147473848 -10.733093695433862 0.9709165217918039 0.9995229567034386 1.1150619494709015 0.0 0.06789554600253123 0.4250329320751029 0.7074906270688199 0.03400863401126684 0.008630912872405049 1.8488696976388132e-11 10.733093695433862 0.11553899276746293 FALKVDS(ph)PDVKR ddPTM_A549_MK2206_60min_R1 2 FALKVDSPDVKR 12 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 FALKVDS(1)PDVKR;FALKVDS(1)PDVKR 47.545 0.0072316 16288200.0 6514.6 8158.7 7384.5 6497.200000000001 10501.1 7253.2 6905.0 6507.9 11026.0 11100.0 11990.900000000001 True False 7614.105213321827 8573.942981374743 8431.733139894315 8089.014291670392 8956.402100723059 8020.728809715507 8159.549120232282 7430.414754607878 8528.628604903923 8592.502290715194 9013.228597995656 0.8447700100511194 0.951262124127352 0.9354842216882581 0.8974602389946273 0.9936952118039883 0.8898840989675044 0.905285939607344 0.8243899146483691 0.9462345831104853 0.9533212430256099 1.0 13.137828266169894 -9.493666858253818 1.4649748464070984 0.9861848465050278 0.9105267035408762 0.23526541718092497 0.046599954143050404 0.29045097535131437 1.2746349095946703 0.010756551067822442 0.008577102526335197 3.208729756285965e-10 9.493666858253818 -0.07565814296415163 FALKVDS(ph)PDVKR ddPTM_A549_PD325901_60min_R1 2 FALKVDSPDVKR 12 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 FALKVDS(1)PDVKR;FALKVDS(1)PDVKR 81.44800000000001 0.00015065 30576000.0 8946.5 8707.9 9395.099999999999 10171.2 10965.7 12590.0 11426.599999999999 11619.5 12742.9 11426.2 12516.0 True False 9854.7420939348 9441.745293377704 10032.707983325845 10799.451923528799 10195.507061611306 12487.47121420119 11861.445515875435 11387.739957178594 12207.360227628436 10704.747781992512 10976.611345460977 0.8977945728223228 0.8601694089571672 0.9140077631950181 0.9838602810688531 0.9288392146477272 1.1376435605843858 1.0806108681966182 1.03745496663573 1.1121246661134991 0.9752324688455982 1.0 13.422145119717197 -6.714851114669078 1.343324810738465 1.0591350902846723 0.8856484732072586 0.6158551492792432 0.05360249243711848 0.20865898903028224 0.7462306465993315 0.008488770258670132 0.024016933009031186 1.9281858227663052e-07 6.714851114669078 -0.17348661707741375 FALLQVDS(ph)GSGSDSEPGKGK ddPTM_A549_MK2206_60min_R1 1 FALLQVDSGSGSDSEPGKGK 20 1 Q5VSY0-2;Q5VSY0;C9J9D2;B4DXS0 Q5VSY0-2 GKAP1 G kinase-anchoring protein 1 1 FALLQVDS(0.35)GS(0.35)GS(0.29)DS(0.01)EPGKGK 61.222 0.00065049 2773200.0 1562.1 2071.3 2020.1 1936.6 2023.3 2074.4 1799.8 2019.6 2722.2 2269.1 2578.9 True False 1825.7442903217423 2176.7203227623895 2306.580556016048 2411.067086937276 1725.675250249302 2293.9116311247226 2126.800363011448 2305.8844847656014 2105.6260464601355 1756.508734041607 1938.4879559808676 0.9418393777937726 1.1228959746933156 1.1898864519119114 1.2437874991682811 0.8902171638080242 1.1833509844862626 1.0971439654549182 1.1895273724302469 1.0862208557776138 0.9061231093142492 1.0 10.920716056170756 -10.060953240998987 0.8890859071163278 1.007677781904064 1.1095304886939925 0.1988224161547506 0.10639311571128707 0.7737314822843365 1.2285349940259773 0.04093039543911996 0.019149785848266453 8.690539923194597e-11 10.060953240998987 0.10185270678992842 FALLQVDSGSGS(ph)DSEPGKGK ddPTM_A549_MK2206_60min_R1 1 FALLQVDSGSGSDSEPGKGK 20 1 Q5VSY0-2;Q5VSY0;C9J9D2;B4DXS0 Q5VSY0-2 GKAP1 G kinase-anchoring protein 1 1 FALLQVDS(0.222)GS(0.222)GS(0.553)DS(0.002)EPGKGK 84.181 2.42e-05 2863200.0 1860.8 1831.8 1452.5 1759.0 2138.7 2187.0 1882.1 1649.8 2449.2 2688.6 2765.7 True False 2174.8575478078856 1925.0307957495986 1658.4863410788118 2189.9550789645104 1824.1000631187585 2418.4268883868913 2224.053207702994 1883.664202300599 1894.4601105687184 2081.243392686204 2078.9003605631415 1.046157665400929 0.9259851180304466 0.7977709622550423 1.0534199332051133 0.8774350602472542 1.163320250582754 1.0698219356220289 0.9060868130256825 0.9112798989825269 1.0011270535940586 1.0 11.021604897708658 -5.242696551838789 22.49502845306998 0.9633189608972462 1.0461579527323313 0.04266734906087366 0.09741948707391188 2468.86516447007 2962925.5215763478 0.012945605609459794 0.5187473514051117 5.718780770202018e-06 5.242696551838789 0.08283899183508503 FALLQVDSGSGS(ph)DSEPGKGK ddPTM_A549_PD325901_60min_R1 2 FALLQVDSGSGSDSEPGKGK 20 1 Q5VSY0-2;Q5VSY0;C9J9D2;B4DXS0 Q5VSY0-2 GKAP1 G kinase-anchoring protein 1 1 FALLQVDS(0.023)GS(0.023)GS(0.951)DS(0.003)EPGKGK;FALLQVDS(0.093)GS(0.072)GS(0.834)DS(0.001)EPGKGK 126.31 7.815000000000001e-16 13634400.0 6614.4 7002.599999999999 7307.9 7497.299999999999 8387.0 8966.5 7429.3 8669.0 7902.900000000001 8689.8 8668.5 True False 7285.88901873608 7592.733677626839 7803.858039972633 7960.391193396295 7797.926053579258 8893.4797968336 7712.026076968951 8496.089994301057 7570.768596075043 8141.12454498945 7602.329454148971 0.958375858699442 0.9987377847040166 1.026508794053075 1.0470989505791428 1.025728508690654 1.169836146995706 1.0144293434639449 1.1175640368577182 0.9958485279723436 1.0708723680143106 1.0 12.892225831773034 -4.362713483430148 15.14379294971695 1.0205885169647047 1.0353391978282702 0.0 0.06059823230580431 0.0 0.0 0.007846582882623234 0.0 4.337969723534228e-05 4.362713483430148 0.014750680863565568 FALVT(ph)PK ddPTM_A549_MK2206_60min_R1 2 FALVTPK 7 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FALVT(1)PK;FALVT(1)PK 79.97399999999999 0.017039 76804000.0 15767.9 18085.4 16791.0 16902.1 25803.0 18989.2 17342.199999999997 18395.9 26761.0 22009.0 22870.0 True False 18429.136031857237 19005.869611010912 19172.216284374754 21043.115258764086 22007.41288102742 20998.624539989207 20493.05325892719 21003.575160080993 20699.67622853563 17037.15161408566 17190.7478201103 1.0720380651677195 1.1055871338405199 1.1152636572299937 1.2240953959051835 1.2801893850878567 1.221507334045371 1.1920978350315712 1.2217953157052495 1.2041172638412199 0.9910651818273455 1.0 14.06934468485978 -10.672472854427497 0.8967057738256293 0.9979180832492858 1.184663147783694 0.5921596114692045 0.05915483686497502 0.38118293825708643 0.5361742497295797 0.046739730535439776 0.011860583120284499 2.125823215624614e-11 10.672472854427497 0.1867450645344082 FALVT(ph)PK ddPTM_A549_PD325901_60min_R1 2 FALVTPK 7 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FALVT(1)PK;FALVT(1)PK 94.69200000000001 0.012706 125214000.0 20311.0 20745.7 20540.0 21451.1 27137.0 23810.0 24199.0 22885.2 23493.0 23000.0 22650.9 True False 22372.957767832086 22494.01294604049 21933.967917053855 22776.085728017206 25230.990737567714 23616.09925418033 25119.906187200908 22428.736732907913 22505.6709091082 21547.77607479543 19864.98289588542 1.1262510461293243 1.1323449440623286 1.1041523686182977 1.146544441915163 1.270123959824488 1.188830585858288 1.264531981671322 1.1290589501364996 1.1329318040223302 1.0847115342474603 1.0 14.277939930789108 -10.031394414547254 0.7040460490619695 1.005619461711645 1.171793026010935 0.40345147036368345 0.05660643477561301 0.36903987356648277 0.3642372102011787 0.030225933275802263 0.012133692895559147 9.302626522447732e-11 10.031394414547254 0.1661735642992901 FAMEPEEFDSDTLR ddPTM_A549_MK2206_60min_R1 2 FAMEPEEFDSDTLR 14 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 61.353 0.018237 1106800.0 1042.4 773.25 1019.2 823.13 1449.2 1512.3 1080.3 843.81 1478.3 1521.1 1766.8 False True 1218.3316357668423 812.6051221822132 1163.7378855955426 1024.7968869517092 1236.0245997436311 1672.3305822165064 1276.5765263703013 963.4226515597467 1143.46741036001 1177.4824535501696 1328.054798800651 0.9173805454918741 0.6118761988707592 0.8762724901461137 0.771652561232556 0.9307030107943353 1.2592331157771248 0.961237840127652 0.7254389295003497 0.8610092078976413 0.8866218883539584 1.0 10.375098961713537 -6.7833814335171585 7.938369039988547 0.94386329960577 0.7870322214538724 0.21280318061958214 0.14038257061301831 0.22281484955355443 61.933933382347085 0.02085313937467756 0.040232879085614445 1.6467154737953064e-07 6.7833814335171585 -0.15683107815189756 FANLT(ph)PSR ddPTM_A549_MK2206_60min_R1 2 FANLTPSR 8 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 FANLT(0.999)PS(0.001)R;FANLT(1)PSR 131.45 0.001137 49271000.0 6336.4 7158.8 6072.6 6093.4 8644.2 6303.200000000001 6140.6 6165.1 7755.7 8240.2 7861.1 True False 7405.829409893533 7523.1523422929495 6933.785993001856 7586.283273543119 7372.649630902502 6970.20044027447 7256.267534786142 7039.021804826905 5999.046333307943 6378.733096932556 5908.971914677266 1.253319446568739 1.2731744964984906 1.1734335673146556 1.2838584077036461 1.2477042939719538 1.1795961363365468 1.2280084656964327 1.1912430633394473 1.0152436701225371 1.0794996471532472 1.0 12.528691426466027 -8.711688868483831 3.324636202025218 1.0057547500097876 1.232736532159131 0.8331992778345476 0.03918766153431895 0.045311633276300195 1.0111239990808663 0.005572821497020211 0.006176277248840791 1.9422768396040423e-09 8.711688868483831 0.2269817821493434 FANLT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 FANLTPSR 8 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 FANLT(0.997)PS(0.003)R;FANLT(0.999)PS(0.001)R 104.05 0.0022173 66698000.0 5397.200000000001 5761.4 5343.6 4933.5 6540.3 6526.0 5957.1 5830.5 6303.6 7014.6 6812.5 True False 5945.119770791361 6246.933397635055 5706.248829677167 5238.231090208562 6080.931890810111 6472.854419688406 6183.8007003502 5714.206103561235 6038.681613359486 6571.696958880873 5974.6056879955995 0.9950647927672477 1.0455808674012792 0.9550837540864622 0.8767492557263504 1.0177963548336162 1.0833944125708423 1.035014028252094 0.9564156032995501 1.010724712007795 1.0999381887385424 1.0 12.544627785915289 FAPVVT(ph)TPVK ddPTM_A549_PD325901_60min_R1 1 FAPVVTTPVK 10 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 FAPVVT(0.5)T(0.5)PVK 81.33800000000001 0.0011924000000000001 4368100.0 3865.7 4514.4 4198.5 4400.1 4420.0 4474.6 4456.9 4295.7 4455.8 4826.6 4483.2 True False 4258.1430182220665 4894.844331288175 4483.4354576314845 4671.884183647852 4109.554448172208 4438.160341148902 4626.509768409257 4210.018893588541 4268.538221461892 4521.847652287292 3931.7948213463283 1.0830023466901026 1.2449389028932285 1.1403024983120211 1.188231938829428 1.0452108095419412 1.1287873713687795 1.176691556561195 1.0707626122125424 1.0856462291183995 1.1500721318766367 1.0 11.94097232201973 -9.768094499216222 0.22291551472459117 0.9441470642076931 1.183134500873921 0.0 0.06817644489808292 2.028391521728121 0.23897335248409268 0.1569546064156124 0.0640272281521767 1.7057111986793812e-10 9.768094499216222 0.2389874366662278 FAPVVTT(ph)PVK ddPTM_A549_PD325901_60min_R1 1 FAPVVTTPVK 10 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 FAPVVT(0.155)T(0.845)PVK 111.06 0.00018078 4867100.0 3889.9 3779.9 3879.5 4053.5 5386.7 4851.0 4716.0 4738.9 4521.7 3851.0 4671.1 True False 4284.79978440697 4098.445438560201 4142.786199328649 4303.875488833565 5008.356775106163 4811.495064343924 4895.4699606942195 4644.378921904868 4331.668673635319 3607.8472027842267 4096.584312542567 1.0459444887508211 1.0004543116595783 1.0112781486382751 1.050600978882903 1.22256894842174 1.174513862588524 1.1950126220289652 1.1337198425735093 1.0573854565553529 0.880696435744782 1.0 12.000205792159534 -4.119035301605981 16.09308657906854 1.0635789197394474 1.0793093729784855 0.0 0.09747031520163053 0.0 0.0 0.012223260515866217 0.0 7.602644763672534e-05 4.119035301605981 0.0157304532390381 FAQSAPGS(ph)PLSSQPVLITVQR ddPTM_A549_MK2206_60min_R1 4 FAQSAPGSPLSSQPVLITVQR 21 0 Q01167-2;Q01167 Q01167-2 FOXK2 Forkhead box protein K2 1 FAQSAPGS(0.829)PLS(0.142)S(0.028)QPVLITVQR;FAQSAPGS(0.979)PLS(0.02)S(0.001)QPVLITVQR;FAQSAPGS(0.926)PLS(0.062)S(0.013)QPVLITVQR;FAQSAPGS(0.98)PLS(0.017)S(0.003)QPVLITVQR 200.99 1.2597999999999999e-55 39765300.0 3983.39 5116.5 5253.6 4144.85 6900.6 4409.22 5338.03 4872.469999999999 8486.1 7663.4 7425.4 True False 4655.688847464772 5376.907995661549 5998.639477791154 5160.338436069385 5885.530881169542 4875.800733796642 6307.880954420498 5563.157543813559 6564.011899517063 5932.232617537548 5581.468249385529 0.8341333569311844 0.9633500999048951 1.0747422021887434 0.9245485606117161 1.0544771766492604 0.873569554809064 1.1301472430869675 0.996719374767744 1.1760367713709925 1.0628444617938364 1.0 12.446428968987782 -7.773819839175254 24.99957109347175 1.0805904801984516 0.9632536684152032 0.3434105650281485 0.08111429903367079 221.31868594175927 446902.5616802754 0.013950167331605444 0.01934797501051256 1.6833722390282025e-08 7.773819839175254 -0.1173368117832484 FAQSAPGS(ph)PLSSQPVLITVQR ddPTM_A549_PD325901_60min_R1 1 FAQSAPGSPLSSQPVLITVQR 21 0 Q01167-2;Q01167 Q01167-2 FOXK2 Forkhead box protein K2 1 FAQSAPGS(0.562)PLS(0.357)S(0.082)QPVLITVQR 147.49 8.8133e-22 32477000.0 1749.4 2116.2 2083.1 2028.5 2403.6 2401.3 2298.5 1940.7 2637.4 2401.6 2701.7 True False 1926.9978001597876 2294.5396008045445 2224.4716926979027 2153.7958379422457 2234.779427969847 2381.7446089484783 2385.9706752874617 1901.9912160503022 2526.559249805557 2249.9625661403793 2369.408027487371 0.8132823801577412 0.9684020540935618 0.9388301495107344 0.9090016632661745 0.9431804915169928 1.0052066091268332 1.0069902049828263 0.8027284427103343 1.0663250991366129 0.9495884795014994 1.0 11.21031094611241 -2.000000000000015 0.19229584440420336 1.0354637494493812 0.25474090793138704 0.09188578861482943 0.07308602371914456 44.81973399762681 0.48813644177425136 0.0641248385864813 10.547664191680402 0.009999999999999652 2.000000000000015 -0.7807228415179942 FARS(ph)DDEQSSADKER ddPTM_A549_MK2206_60min_R1 4 FARSDDEQSSADKER 15 2 A6NGV6;P27540-3;P27540-4;P27540 A6NGV6 ARNT Aryl hydrocarbon receptor nuclear translocator 1 FARS(0.524)DDEQS(0.238)S(0.238)ADKER;FARS(0.994)DDEQS(0.006)SADKER;FARS(0.918)DDEQS(0.068)S(0.014)ADKER;FARS(0.981)DDEQS(0.009)S(0.01)ADKER 114.06 3.7493000000000004e-07 60752700.0 8040.799999999999 9368.2 9243.2 8352.4 11655.599999999999 9636.1 8317.5 9210.900000000001 12578.099999999999 13483.9 14471.5 True False 9397.8904613143 9845.001365182545 10554.024748956754 10398.738374953478 9941.07668007995 10655.785706074497 9828.682086536135 10516.573282198211 9729.180433098314 10437.877625024736 10877.827156918509 0.8639492359774313 0.9050521968370249 0.9702328044663028 0.9559573088399074 0.9138844124543046 0.9795877018782387 0.9035519635265489 0.9667898864810944 0.8944047641821893 0.9595553849544339 1.0 13.40910278696489 FARS(ph)DDEQSSADKER ddPTM_A549_PD325901_60min_R1 4 FARSDDEQSSADKER 15 2 A6NGV6;P27540-3;P27540-4;P27540 A6NGV6 ARNT Aryl hydrocarbon receptor nuclear translocator 1 FARS(1)DDEQSSADKER;FARS(0.989)DDEQS(0.011)SADKER;FARS(0.986)DDEQS(0.007)S(0.007)ADKER;FARS(1)DDEQSSADKER 194.7 4.8317e-39 283215000.0 23064.4 22161.199999999997 20916.0 22519.6 22664.6 23450.199999999997 22421.7 24285.4 24484.6 25322.5 24989.8 True False 25405.88090888612 24028.802098738175 22335.485538125547 23910.58454627763 21072.71668462531 23259.229346089025 23274.97006312502 23801.00864547227 23455.59740949006 23723.633028435102 21916.213023394117 1.1592276859951585 1.096393892187898 1.0191307008324788 1.0909998237722298 0.9615126784053235 1.0612795797002579 1.0619978021878378 1.086000059411097 1.0702395247049639 1.082469539929717 1.0 14.419710911225339 -14.999895667515764 0.009255864316718238 3.7238253677597365e-07 1.9668468357916638 0.05330952846005588 0.049364867252494816 12647.32567435294 9.117099992778892 1109.242848586369 845.0397563900099 1.0002402632815168e-15 14.999895667515764 1.966846463409127 FAS(ph)ASIK ddPTM_A549_PD325901_60min_R1 1 FASASIK 7 0 Q9NZI8;Q9NZI8-2 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 1 FAS(0.998)AS(0.002)IK 60.019 0.036853 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FAS(ph)DDEHDEHDENGATGPVK ddPTM_A549_MK2206_60min_R1 4 FASDDEHDEHDENGATGPVK 20 0 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK 352.56 3.6421999999999977e-231 6322500000.0 47847.7 51521.1 45724.4 43026.1 59863.6 48408.3 46799.7 55357.7 64731.0 61725.3 59783.4 True False 55923.221996048625 54143.3039255894 52208.80747264993 53567.49643151505 51057.74374083137 53530.83417517109 55302.59970487108 63204.823500846076 50069.53185416614 47781.51185991734 44937.53184209802 1.2444658107292639 1.2048570917476893 1.1618085224640686 1.1920435821829534 1.136193770504322 1.191227732828503 1.2306550323946128 1.4065041160457112 1.1142029791511692 1.063287410350273 1.0 15.455633267375001 -9.234509270070639 2.2307807368613024 1.0387563576841614 1.2141625706532224 0.5019989751355727 0.07101877641420098 0.15967405425526984 1.6396119903027404 0.015293310247273845 0.014093181611154483 5.827613355492047e-10 9.234509270070639 0.175406212969061 FAS(ph)DDEHDEHDENGATGPVK ddPTM_A549_PD325901_60min_R1 6 FASDDEHDEHDENGATGPVK 20 0 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK 357.25 1.7258999999999992e-256 9438114100.0 81397.58 78781.99 80126.45 79928.36 92177.69 76961.79000000001 84777.9 82575.84000000001 84882.71 84552.48 83139.31999999999 True False 89661.00239986877 85421.22478271791 85564.3127364858 84865.35326672383 85703.44705016713 76335.03869884014 88004.16937674701 80928.80009170689 81315.38488627532 79213.82198298356 72913.71070357236 1.2296864545048574 1.171538575645866 1.1735010042808536 1.1639148857989188 1.1754092093679185 1.0469229718561033 1.206963251870753 1.1099256821631194 1.115227631423939 1.0864050288844034 1.0 16.153902504172763 -14.999999998630237 0.09647142742421623 0.4737193017461247 1.272809233280471 0.5034628533265242 0.046930138917264275 40.69133996002102 0.28384036255242623 4.309844033735245 0.28757161003053605 1.0000000031539957e-15 14.999999998630237 0.7990899315343463 FAS(ph)DDEHDEHDENGATGPVKR ddPTM_A549_MK2206_60min_R1 19 FASDDEHDEHDENGATGPVKR 21 1 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR 318.88 1.4971999999999994e-184 19428773100.0 68732.37000000001 74548.54 71014.23000000001 61855.409999999996 98276.49000000002 74265.31000000001 70391.84999999999 72499.69 110952.73000000003 109443.78000000001 117941.28 True False 80332.71371089002 78342.74226344096 81085.11564697375 77009.98822679484 83820.14850707926 82124.01581087687 83181.13797813504 82776.7430784888 85822.11381010174 84720.35408599381 88653.20516226583 0.9061456217387014 0.8836989268469969 0.9146326463725718 0.8686655838989701 0.9454835654690609 0.9263513446644337 0.9382755854780994 0.9337140482059155 0.9680655499484512 0.9556378015992365 1.0 16.435885170719843 -8.30539314643057 0.3554317980615588 1.0029465323440794 0.8850035033496787 0.6433939366491577 0.021336090508280024 0.3133702126710624 0.10569229673125483 0.009287764148699997 0.012715980461116196 4.950018859238281e-09 8.30539314643057 -0.11794302899440068 FAS(ph)DDEHDEHDENGATGPVKR ddPTM_A549_PD325901_60min_R1 18 FASDDEHDEHDENGATGPVKR 21 1 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR 356.24 5.078999999999998e-257 23011217100.0 84684.91999999998 79223.25000000001 83743.11000000002 84296.83 103787.98000000001 97513.66 94454.65000000001 98158.34999999999 102258.87999999999 99067.17 112318.08 True False 93282.07073665675 85899.67131151998 89426.42103282924 89503.65373710857 96498.27033389323 96719.54108351088 98049.1733933175 96200.50470551419 97961.2948884341 92812.05197929098 98503.66820297179 0.9469908323052937 0.8720454058068108 0.9078486381701194 0.9086326973395729 0.9796413889384674 0.9818877088334961 0.9953860113237836 0.9766185002094357 0.9944938769851687 0.9422192459680491 1.0 16.587889830003725 -6.806770171676191 3.2488940239522117 0.9941668476578065 0.9048357540657892 0.6711303141422011 0.023515124450499483 0.062133046732337396 1.3430498184191675 0.002378051263288208 0.004902696949192063 1.5603780352929669e-07 6.806770171676191 -0.0893310935920173 FAS(ph)IRIPGSK ddPTM_A549_PD325901_60min_R1 2 FASIRIPGSK 10 1 Q9NSV4-7;Q9NSV4-5;Q9NSV4-4;Q9NSV4 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 1 FAS(1)IRIPGSK;FAS(1)IRIPGSK 42.208999999999996 0.022438999999999997 1843200.0 964.67 909.98 1317.8 918.6 1168.9 1236.3 1208.0 1161.0 1058.9 1505.3 1077.2 True False 1062.6025882474803 986.6672081750878 1407.2338325751502 975.339835708034 1086.8004964860854 1226.2319826939581 1253.9711010429637 1137.8429442131192 1014.3981154239416 1410.2551011038945 944.7112289334101 1.1247908945119356 1.0444114327814717 1.4895915169378622 1.0324211312796652 1.150404973711486 1.297996620701109 1.3273591576324457 1.2044346561835164 1.0737652780619626 1.4927896037565773 1.0 9.883729596090584 -8.875188707196855 2.769345665692212 1.0297849208003511 1.2125300170998297 0.0 0.18712925418612567 0.23608252582485093 3.486954435491109 0.02241819424429323 0.023496121968435774 1.3329421237951403e-09 8.875188707196855 0.18274509629947855 FASDDEHDEHDENGATGPVK ddPTM_A549_PD325901_60min_R1 2 FASDDEHDEHDENGATGPVK 20 0 P05455 P05455 SSB Lupus La protein 0 ; 119.23 2.602e-14 40234000.0 7326.6 6510.1 6240.5 7371.5 7564.4 7596.0 6916.0 7488.9 8355.4 7714.5 8625.1 False True 8070.391038442146 7058.728974197939 6664.017857175011 7826.820813108826 7033.102639763314 7534.140694445775 7179.192164580412 7339.528014571598 8004.251594686182 7227.405153435196 7564.2673790137005 1.0669098055460908 0.9331675654117771 0.8809865547142951 1.0347096977062913 0.9297797509479835 0.996017236956548 0.9490928605324501 0.9702893415606091 1.05816613739662 0.9554666422140107 1.0 12.884984644718589 -8.7015108189469 9.62653323047244 1.0274491489112672 0.9668037918475557 0.02764153888565868 0.05440194212621879 0.3890032799181661 59.4502960216344 0.008280175051466438 0.009383353165328236 1.9883332773241675e-09 8.7015108189469 -0.060645357063711436 FAT(ph)LSLHDR ddPTM_A549_PD325901_60min_R1 1 FATLSLHDR 9 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 FAT(0.956)LS(0.044)LHDR 52.247 0.02168 1576100.0 220.55 290.05 143.13 178.51 278.85 232.89 255.0 305.95 261.0 213.79 265.33 True False 242.94007363967134 314.49353143056373 152.8436625106096 189.5361572743752 259.26453798027626 230.99342105443344 264.704164541354 299.8475872368681 250.03107765194903 200.29126291437026 232.69609206544902 1.0440230065030103 1.351520468775677 0.6568381151309588 0.8145223050031519 1.1141765883517911 0.9926828551528202 1.1375531157046772 1.2885802446245285 1.0744962471549557 0.860741842016133 1.0 7.862303171875361 FAT(ph)LTLQER ddPTM_A549_PD325901_60min_R1 1 FATLTLQER 9 0 M0R0L4;G5E9A7;Q09019 M0R0L4 DMWD Dystrophia myotonica WD repeat-containing protein 1 FAT(0.99)LT(0.01)LQER 83.045 0.0015520999999999998 2202800.0 987.74 1258.2 894.33 956.98 1211.3 765.73 1010.2 1223.5 1142.0 1078.3 1447.2 True False 1088.014637664244 1364.232929653284 955.0246118431734 1016.0904811407298 1126.2224667581443 759.4941487569725 1048.643713802651 1199.0963326828173 1094.0057114119766 1010.215953976171 1269.2035745566575 0.8572420212764496 1.07487321734799 0.7524597558565581 0.8005732898252024 0.8873458043573053 0.5984021507521121 0.8262218408650088 0.9447628077329288 0.8619623623374376 0.7959447753123822 1.0 10.309707774210153 -10.255538192149283 0.6178165113219299 1.0039614877087726 0.8388590284775876 0.0 0.1257146523054203 1.0496179549224447 0.7230716326299055 0.08729572108758815 0.0252542733121964 5.552157889221271e-11 10.255538192149283 -0.16510245923118494 FATLS(ph)LHDR ddPTM_A549_PD325901_60min_R1 2 FATLSLHDR 9 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 FATLS(1)LHDR;FATLS(1)LHDR 103.91 0.00019412 7953500.0 283.7 712.8399999999999 312.91999999999996 235.055 772.77 591.78 653.8 423.83 495.0 562.72 642.54 True False 312.50101515109856 772.9135285121978 334.15663294082265 249.57381350136268 718.4933011117738 586.9607398840337 678.6807167730875 415.3763781617968 474.19687140886873 527.1897631656042 563.5116533966522 0.55455998694517 1.3716016764752672 0.5929897472867557 0.44289024370129454 1.2750282922827705 1.041612425130942 1.2043774297873635 0.7371211857963408 0.841503221008075 0.9355436750737767 1.0 9.138301635351848 -6.7646161058365495 24.99820494331265 0.9597035700684969 0.7750512145997931 0.16934094607207428 0.26623505819921367 154.80003704173598 1218161.882224537 0.03756395682440459 0.07316658083139965 1.7194276018760242e-07 6.7646161058365495 -0.18465235546870384 FAVAYS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 FAVAYSPAR 9 0 I3L1F3;O14939-3;O14939-4;O14939 I3L1F3 PLD2 Phospholipase D2 1 FAVAYS(1)PAR;FAVAY(0.003)S(0.997)PAR 99.815 7.3961e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FAVAYS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 FAVAYSPAR 9 0 I3L1F3;O14939-3;O14939-4;O14939 I3L1F3 PLD2 Phospholipase D2 1 FAVAYS(1)PAR 68.893 0.0038242 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FAVLHGEAPR ddPTM_A549_PD325901_60min_R1 1 FAVLHGEAPR 10 0 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 0 72.243 0.00624 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FCGVNETENEDNTNRDS(ph)PIFDYSPR ddPTM_A549_PD325901_60min_R1 1 FCGVNETENEDNTNRDSPIFDYSPR 25 1 F8W9J4;Q03001;Q03001-9 F8W9J4 DST Dystonin 1 FCGVNET(0.002)ENEDNT(0.119)NRDS(0.833)PIFDY(0.016)S(0.03)PR 49.453 0.002565 4171500.0 1697.6 1957.7 1489.6 2463.7 1671.3 2532.4 2172.9 1939.4 2239.1 2182.2 2753.6 True False 1869.939102292931 2122.682249548748 1590.693213692475 2615.8771535313317 1553.9136536719934 2511.776974014545 2255.5908985565043 1900.7171455701318 2144.998413679997 2044.4155195834173 2414.924656508576 0.7743260632389384 0.8789848759164425 0.6586926881570916 1.0832127397768536 0.6434625815277376 1.0401057305224566 0.9340212302182415 0.7870709922346524 0.888225811889788 0.8465752809610096 1.0 11.237762463629116 -14.999999667087819 0.06317715782710977 1.5360123080040478 0.6395174277920284 0.029854947677748322 0.13552127183095122 289.1062634204585 1.3766526856543873 23.655378301542243 3.8437494275146222 1.0000007665589198e-15 14.999999667087819 -0.8964948802120194 FCSNSGRLS(ph)GPAELR ddPTM_A549_MK2206_60min_R1 4 FCSNSGRLSGPAELR 15 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 FCS(0.001)NS(0.008)GRLS(0.991)GPAELR;FCSNS(0.001)GRLS(0.999)GPAELR;FCS(0.022)NS(0.02)GRLS(0.958)GPAELR;FCS(0.009)NS(0.008)GRLS(0.984)GPAELR 127.37 9.7449e-10 104499800.0 7515.38 9390.7 7828.099999999999 6699.799999999999 10224.8 7684.6 7890.0 7931.4 11797.900000000001 10577.0 11460.599999999999 True False 8783.792410599966 9868.646519077285 8938.242290257524 8341.251300765447 8720.745464710657 8497.779271375366 9323.510870185768 9055.70023889379 9125.694487374936 8187.648353954472 8614.616723531088 1.0196382140376332 1.1455700045390036 1.0375670302130149 0.9682672565084719 1.0123196126520262 0.9864373011701639 1.082289690813326 1.0512017573756787 1.0593268139774372 0.9504367538012065 1.0 13.072570894999531 -10.945741600898902 1.227552266195591 1.0001755680280249 1.0420557815958342 0.17660762483550219 0.048008033367853434 0.9281847933421228 2.5029020774627737 0.032233740836311295 0.0076672182737809215 1.1330743259847721e-11 10.945741600898902 0.041880213567809355 FCSNSGRLS(ph)GPAELR ddPTM_A549_PD325901_60min_R1 2 FCSNSGRLSGPAELR 15 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 FCSNS(0.004)GRLS(0.996)GPAELR;FCSNS(0.002)GRLS(0.998)GPAELR 145.05 3.7857e-14 172562000.0 7287.9 7137.799999999999 8096.1 6847.9 6701.4 6765.4 7396.299999999999 8243.2 5678.5 7142.3 7680.1 True False 8027.7622429315825 7739.327456111273 8645.550031804274 7270.8792302907 6230.716782574944 6710.304825461222 7677.770243910658 8078.782909334697 5439.8523925156815 6691.333959087454 6735.496388165135 1.1918590375962599 1.1490359448057843 1.2835802342638434 1.0794867684980547 0.9250568070265566 0.9962598803039704 1.139896720515088 1.1994339308873858 0.8076394194307617 0.9934433297068828 1.0 12.717568557054173 -6.802184963867702 0.458751205338966 0.9239456720885477 1.2501668786880575 0.2457428832651012 0.11547840963731523 1.3101979800339218 0.41421217533319504 0.03423803844498026 0.18512507053358093 1.5769395159358702e-07 6.802184963867702 0.3262212065995098 FDAGELITQR ddPTM_A549_PD325901_60min_R1 2 FDAGELITQR 10 0 P35232;C9JZ20;E7ESE2;E9PCW0;C9JW96 P35232 PHB Prohibitin 0 ; 92.06200000000001 0.0017393 3733300.0 1617.49 2065.79 1923.3200000000002 1730.87 1881.1399999999999 2243.1 1792.06 1952.88 1822.27 2142.93 2096.26 False True 1781.696394066797 2239.8813731906353 2053.848061062709 1837.7819088090175 1749.0152159806944 2224.832937297435 1860.2578239528596 1913.9282763952779 1745.686329014625 2007.6250340852787 1838.4333092869938 0.9691384425349641 1.2183642245142612 1.1171730030605571 0.9996456763078184 0.9513617965609105 1.2101787571289708 1.011871257203412 1.04106483859214 0.9495510771025253 1.0920303847540183 1.0 10.844261127177713 -8.377248434954465 2.158117967273158 0.9768965633512514 1.075996729530194 0.018259565644186626 0.09120316757311145 0.35596018981303246 3.241384707973868 0.014301839751438998 0.01764586260510168 4.195189326272427e-09 8.377248434954465 0.09910016617894257 FDALKDDDS(ph)GDHDQNEENSTQK ddPTM_A549_MK2206_60min_R1 2 FDALKDDDSGDHDQNEENSTQK 22 1 B4E1E4;B9A023;B8ZZL3;B9A044;B8ZZ50;O60573-2;O60573 B4E1E4 EIF4E2 Eukaryotic translation initiation factor 4E type 2 1 FDALKDDDS(1)GDHDQNEENSTQK;FDALKDDDS(1)GDHDQNEENSTQK 187.21 6.692200000000001e-50 24609000.0 3204.2 3552.0 3212.2 3245.8 4966.1 3246.1 3207.8 3778.3 5138.200000000001 4447.5 4630.0 True False 3744.990624831268 3732.7816281813366 3667.7382614894054 4041.021145709497 4235.59326855289 3589.600147413209 3790.6157375642442 4313.885595558468 3974.405904019347 3442.8066610770998 3480.243218500687 1.076071524232331 1.072563437043186 1.0538741206338713 1.161131820968075 1.2170394431161662 1.0314222087500062 1.0891812725655616 1.2395356659632886 1.1419908479073335 0.9892431203587791 1.0 11.764972417708345 -10.718245393319357 1.041131908398525 1.001897789487331 1.121143019520577 0.3662137045577438 0.06311501274573071 0.48623381906670654 0.9594079414526948 0.04084443471995021 0.011311754486046306 1.9131746012930522e-11 10.718245393319357 0.11924523003324583 FDALKDDDS(ph)GDHDQNEENSTQK ddPTM_A549_PD325901_60min_R1 3 FDALKDDDSGDHDQNEENSTQK 22 1 B4E1E4;B9A023;B8ZZL3;B9A044;B8ZZ50;O60573-2;O60573 B4E1E4 EIF4E2 Eukaryotic translation initiation factor 4E type 2 1 FDALKDDDS(1)GDHDQNEENSTQK;FDALKDDDS(1)GDHDQNEENSTQK;FDALKDDDS(1)GDHDQNEENSTQK 226.18 9.744599999999998e-88 43721800.0 11909.099999999999 12686.1 11385.599999999999 11409.0 14253.599999999999 11818.7 10696.7 11641.4 12933.2 12902.9 12699.900000000001 True False 13118.103064983941 13755.202168871823 12158.295283174713 12113.708018281033 13252.476308250547 11722.452425677497 11103.76877195884 11409.20314449837 12389.66258041451 12088.208691977312 11137.89281129912 1.1777903852401908 1.2349914298795825 1.0916153970201994 1.0876121923163036 1.189854897400901 1.0524838606621671 0.9969362212477335 1.024359215678931 1.11238838354105 1.085322771261914 1.0 13.44318869317497 -2.0000000000000466 0.20991046343950473 1.0272075997998316 1.951116595223503 0.47702881532155006 0.054004436288117325 31.497978020389457 0.35824725144943204 0.04116456657330443 9.846333626397653 0.009999999999998926 2.0000000000000466 0.9239089954236714 FDASFFGVHPK ddPTM_A549_MK2206_60min_R1 1 FDASFFGVHPK 11 0 P49327;A0A0U1RQF0;A0A0U1RRG3 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 51.092 0.02715 662740.0 286.65 136.51 304.17 0.0 252.32 267.21 226.0 414.49 333.62 246.36 456.19 False True 335.0295120803581 143.45777591864706 347.305879770012 0.0 215.20406224628283 295.48598484035733 267.06127460861626 473.2452268223878 258.05560268166585 190.7071048955491 342.90543279650694 0.9770317995491697 0.418359588965102 1.012832829557753 0.0 0.6275901215423235 0.8617127539525158 0.778819024331704 1.3801041965503924 0.7525561802189521 0.5561507245314539 1.0 8.421666951460022 -7.290542203633407 3.9468480558792263 0.9139051201684291 0.5835979745421228 0.1612292219635426 0.31693484056862625 0.2622312238630639 9.164268918264213 0.04274913800714092 0.0717232276132968 5.1222149146384934e-08 7.290542203633407 -0.33030714562630625 FDASFFGVHPK ddPTM_A549_PD325901_60min_R1 1 FDASFFGVHPK 11 0 P49327;A0A0U1RQF0;A0A0U1RRG3 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 56.093999999999994 0.041089999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FDDS(ph)GSWR ddPTM_A549_MK2206_60min_R1 1 FDDSGSWR 8 0 F8W9J4;Q03001;Q03001-9 F8W9J4 DST Dystonin 1 FDDS(0.625)GS(0.375)WR 67.563 0.0079501 1883500.0 657.78 647.95 556.88 630.7 862.58 694.33 642.37 619.31 1070.4 1040.1 716.53 True False 768.7971828230176 680.9278873817847 635.8539577418029 785.2215283131986 735.6956246528167 767.8035397410474 759.0803140280394 707.0990890573306 827.9561090775587 805.140687619178 538.5958257780339 1.427410213795185 1.264265066291859 1.1805772107930352 1.457904964597338 1.3659512187827678 1.4255653367381917 1.4093690996054462 1.3128566082662887 1.5372493982505835 1.4948884656803718 1.0 9.073059238491647 -10.944829937742577 1.1827800837598716 0.9982345599191412 1.3845017824428865 0.0 0.17105121574407206 0.23334018182464886 0.5758077177991833 0.07376799526234457 0.016916182661331495 1.1354553534379053e-11 10.944829937742577 0.38626722252374524 FDDSGS(ph)WR ddPTM_A549_MK2206_60min_R1 1 FDDSGSWR 8 0 F8W9J4;Q03001;Q03001-9 F8W9J4 DST Dystonin 1 FDDS(0.068)GS(0.932)WR 78.934 0.004188399999999999 1307000.0 472.85 447.16 506.93 615.39 866.31 532.54 476.58 510.93 822.31 820.85 796.91 True False 552.6555199274279 469.91853402521633 578.820296649282 766.160577625907 738.8769465939175 588.8930293285574 563.1684170485591 583.3558921575016 636.0580979592365 635.4194148949163 599.0152534028904 0.9226067563186384 0.7844850884108536 0.9662864064998601 1.2790335025251798 1.2334860296069254 0.9831018926198781 0.9401570558500936 0.9738581594434682 1.0618395681010007 1.0607733463968085 1.0 9.226448930232062 -5.993723236367207 19.792644855242294 1.0468610619441867 0.8590042753399628 0.373104982430878 0.10519487217049531 11.181699297055212 35245.03608268269 0.015236942878565468 0.04698259727095953 1.0145577288121097e-06 5.993723236367207 -0.1878567866042239 FDGSENRPFS(ph)PSPLNNISSTVTVK ddPTM_A549_MK2206_60min_R1 1 FDGSENRPFSPSPLNNISSTVTVK 24 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 FDGSENRPFS(0.617)PS(0.383)PLNNISSTVTVK 148.3 1.716e-28 17528000.0 3051.9 4255.4 3944.8 3742.0 5372.2 4001.7 3679.8 3694.0 6450.2 5502.6 6210.6 True False 3566.986108208772 4471.981683717022 4504.231957513047 4658.790167984763 4581.956496510305 4425.157237886524 4348.372027897282 4217.635812400546 4989.239998852828 4259.558838278328 4668.336616159908 0.764080742562843 0.9579389944240131 0.9648472952702689 0.99795506430661 0.9814965957359225 0.947908773880702 0.9314606861992264 0.9034558043224182 1.0687404120735597 0.9124360963032196 1.0 12.188692876760374 -4.515844444156564 1.0612045541753525 1.0056575566777233 1.1392100335918658e-19 0.4271582189716834 0.055256535423116884 3.902929277201935 1.1026539776537843 0.00865564759115032 6.50487031298984 3.048986881916782e-05 4.515844444156564 -1.0056575566777233 FDGSENRPFS(ph)PSPLNNISSTVTVK ddPTM_A549_PD325901_60min_R1 2 FDGSENRPFSPSPLNNISSTVTVK 24 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 FDGSENRPFS(0.968)PS(0.032)PLNNISSTVTVK;FDGSENRPFS(0.97)PS(0.03)PLNNISSTVTVK 190.15 3.6116e-51 90181000.0 14829.3 15546.6 17518.6 15802.8 18107.3 16957.4 16721.199999999997 17989.4 19561.9 17822.9 18477.0 True False 16334.759619246326 16856.76654279744 18707.51754389971 16778.903065237224 16835.505714793817 16819.304556608044 17357.534416191727 17630.587304588702 18739.7813713397 16697.559052324857 16204.446135353348 1.0080418351114557 1.0402556435434667 1.1544681865482211 1.0354505748043175 1.0389436068452647 1.0379438097494276 1.0711587592199574 1.0880092511229946 1.1564592343859872 1.0304307171533424 1.0 13.98410209002719 -7.9791682443008956 20.529733980134726 1.0771300511422832 1.0551471000090635 0.015610386320625835 0.05026579183735335 120.60122098881891 118847.8545591859 0.010183455141149975 0.014067947867433 1.0491359179993733e-08 7.9791682443008956 -0.021982951133219686 FDGSENRPFSPS(ph)PLNNISSTVTVK ddPTM_A549_MK2206_60min_R1 2 FDGSENRPFSPSPLNNISSTVTVK 24 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 FDGSENRPFS(0.029)PS(0.971)PLNNISSTVTVK;FDGS(0.002)ENRPFS(0.427)PS(0.571)PLNNISSTVTVK 137.88 1.1182e-23 22238000.0 5019.299999999999 7210.3 6120.3 6044.9 8504.4 7227.6 6755.3 5985.5 10043.4 8717.4 8607.2 True False 5866.435129896883 7577.273472318668 6988.250570261377 7525.900771365874 7253.4140257105555 7992.419834707412 7982.650567980466 6833.962954824972 7768.585936014149 6748.133285502763 6469.794693364819 0.906742085017517 1.1711768041248105 1.0801348267555178 1.1632364129087678 1.1211196598169317 1.2353436567166713 1.233833675768286 1.0562874524957695 1.2007469022133457 1.0430212402911947 1.0 12.659504216421759 -4.069614364959209 10.40200719058348 1.111445582114698 0.6607921623947224 0.0 0.09893814119866215 0.0 0.0 0.013812683400603118 5405021.219480436 8.518941482508634e-05 4.069614364959209 -0.45065341971997563 FDGSENRPFSPS(ph)PLNNISSTVTVK ddPTM_A549_PD325901_60min_R1 2 FDGSENRPFSPSPLNNISSTVTVK 24 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 FDGS(0.006)ENRPFS(0.136)PS(0.857)PLNNISSTVTVK;FDGS(0.003)ENRPFS(0.03)PS(0.966)PLNNIS(0.001)STVTVK 120.33 1.6319e-16 18254900.0 4682.299999999999 5283.9 5263.4 5783.7 6583.7 6309.4 5852.9 5284.8 6439.5 5354.5 6087.9 True False 5157.643649072921 5729.192796848663 5620.605975395389 6140.946013264261 6121.283624531988 6258.018338274902 6075.635312329769 5179.390518154606 6168.8702089644685 5016.415956195312 5339.1268943777495 0.9660088158803763 1.0730579943476646 1.0527200582765779 1.1501779475836862 1.1464952501836716 1.17210518912086 1.1379454791995267 0.9700819292399006 1.1554080528523234 0.9395573574918661 1.0 12.38238812242907 -5.060392935165465 1.8051695592624264 1.0878220744405873 0.8707933746827851 0.1464920246126672 0.07761274679051725 2.263283116375414 4.74152964180529 0.010602758095055958 0.985926026532781 8.701759275216778e-06 5.060392935165465 -0.21702869975780226 FDGVEGPRT(ph)PK ddPTM_A549_MK2206_60min_R1 2 FDGVEGPRTPK 11 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 FDGVEGPRT(1)PK;FDGVEGPRT(1)PK 87.18 0.00012209999999999999 43506000.0 5722.6 6038.7 5115.6 3968.9 6400.2 4710.4 4530.0 4511.1 5698.6 6295.6 6112.3 True False 6688.4349758627495 6346.04403662687 5841.069002700704 4941.280678170692 5458.739058293675 5208.851401489537 5353.042362730231 5150.5622396643475 4407.876198794256 4873.419587515907 4594.447219101885 1.455764895514502 1.3812421242413107 1.2713322678767234 1.0754897036637643 1.1881166107640564 1.1337275526494688 1.1651112979325149 1.1210406810748326 0.9593920636345673 1.060719463106283 1.0 12.165675578769706 -2.000000003260655 0.23586666610305848 0.9619661545764052 3.992467156518626 0.8066550504911283 0.0641929482135179 12.091646838071906 0.14416696790466546 0.03565357208861527 14.482952691811834 0.009999999924920648 2.000000003260655 3.0305010019422207 FDGVEGPRT(ph)PK ddPTM_A549_PD325901_60min_R1 2 FDGVEGPRTPK 11 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 FDGVEGPRT(1)PK;FDGVEGPRT(1)PK 84.46799999999999 0.00020425 42805000.0 5708.3 5335.9 5979.799999999999 5841.4 6386.4 5688.8 5488.9 6613.7 7671.299999999999 9142.7 9052.5 True False 6287.80241377164 5785.575019342676 6385.625187458557 6202.210011218057 5937.841295883937 5642.472298915629 5697.783093141332 6481.784565152722 7348.9019386643495 8565.428361697057 7939.099888525527 0.7920044466072879 0.7287444547340479 0.8043260920155162 0.7812233248484735 0.747923741892449 0.7107193986903678 0.7176862834760908 0.8164382179547736 0.9256593369338761 1.078891622723726 1.0 12.954759732839815 -8.775656537649768 1.8667761880655052 0.9718368340853707 0.754158854424641 0.8532962122722583 0.044492600880727914 0.07401275568504508 0.505372039970858 0.006833758380272172 0.00732647078696085 1.676268030687749e-09 8.775656537649768 -0.21767797966072966 FDHILYTGSTGVGK ddPTM_A549_MK2206_60min_R1 2 FDHILYTGSTGVGK 14 0 P30838;C9JMC5;A8MYB8;E9PNN6;I3L3I9;C9JKT2 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 89.507 7.7813e-05 5443900.0 2256.3 2321.11 2538.5 2237.6800000000003 2907.0 2476.8999999999996 2223.12 2414.99 3693.5 3359.6 3606.4 False True 2637.108278761249 2439.244584737609 2898.497471138426 2785.911700453273 2479.384150879613 2739.003913966847 2627.0321274686144 2757.322228096695 2856.928147307512 2600.664026656464 2710.831348423513 0.9728042581088131 0.8998142160913677 1.0692282545810348 1.027696430496653 0.914621321729034 1.0103925925010855 0.9690872613659155 1.017150045022247 1.053893724878518 0.959360318807322 1.0 11.404519644845603 -8.367685765958896 5.276398535221856 1.0258820274026959 0.9813361982916748 0.020323746624096306 0.05039811174691918 0.3233749202499738 13.379320713716412 0.007839172716633128 0.009499530754640361 4.288587091496397e-09 8.367685765958896 -0.04454582911102101 FDHILYTGSTGVGK ddPTM_A549_PD325901_60min_R1 2 FDHILYTGSTGVGK 14 0 P30838;C9JMC5;A8MYB8;E9PNN6;I3L3I9;C9JKT2 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 124.07 1.1236e-06 11589600.0 4359.6 4434.1 4785.6 4896.3 5982.4 5801.0 4852.6 4863.6 5662.799999999999 5878.9 5761.2 False True 4802.183382632109 4807.7771684753025 5110.379594150586 5198.733330695888 5562.216862159597 5753.758579315421 5037.268348444609 4766.5916825796085 5424.812208917455 5507.705250700652 5052.608923255817 0.9504363895113541 0.9515434979236926 1.0114338298831849 1.0289205853173198 1.1008603568263893 1.1387698249972205 0.9969638309546184 0.9433921672901009 1.0736655639324242 1.0900715520154642 1.0 12.302812802968663 -5.873891223601197 2.6038727398173447 1.037924083055783 0.947742756807581 0.3195178114580487 0.052476993397686404 0.2829567736153541 3.773885581472367 0.007693897589364569 0.03227755487726688 1.3369303314294862e-06 5.873891223601197 -0.09018132624820197 FDIYDPFHPTDEAYS(ph)PPPAPEQK ddPTM_A549_MK2206_60min_R1 2 FDIYDPFHPTDEAYSPPPAPEQK 23 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 FDIYDPFHPTDEAYS(0.999)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK 157.61 2.1821999999999994e-33 80148000.0 8572.8 11149.900000000001 9558.0 10372.8 13423.3 10729.0 11031.8 12151.0 18301.5 18723.6 18669.1 True False 10019.679055163071 11717.382284926547 10913.468122568878 12914.136465652682 11448.750351737986 11864.335658666192 13036.135262067848 13873.441460876837 14156.239471490033 14493.925755895038 14033.047229052088 0.7140059383837679 0.8349848820196722 0.7776976692542684 0.920266015988105 0.8158420737041396 0.8454568323623899 0.9289596941624788 0.9886264354726302 1.0087787235678152 1.0328423698231992 1.0 13.776540698906043 -7.854877769580963 1.139007774087475 1.0062051579330715 0.8098009584090571 0.7900373727390706 0.04630315157894165 0.14289349726539907 0.37381695952168575 0.007756138747400105 0.012282541749301119 1.3967614185726253e-08 7.854877769580963 -0.19640419952401444 FDIYDPFHPTDEAYS(ph)PPPAPEQK ddPTM_A549_PD325901_60min_R1 1 FDIYDPFHPTDEAYSPPPAPEQK 23 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 FDIYDPFHPTDEAYS(1)PPPAPEQK 175.07 4.0648e-41 28856000.0 13708.0 14151.0 13917.0 16376.0 18212.0 17500.0 16975.0 19093.0 19019.0 18804.0 21166.0 True False 15099.62606870376 15343.554432938821 14861.49130971951 17387.50832740557 16932.851947989202 17357.485802106516 17620.992914076414 18712.17513683126 18219.6975703541 17616.71223088928 18562.716182328775 0.8134383955661733 0.8265791645053264 0.8006097364063166 0.9366898764501946 0.9121968887348952 0.9350725201859409 0.9492680241941717 1.0080515670785706 0.9815210980653133 0.9490374176845915 1.0 14.180120207259892 -6.534323195754513 0.568197789802564 0.9943132110986184 0.7766702972737124 0.8428182550041781 0.027915569338313607 0.2802503338801971 0.12970315662345297 0.0046750515362577105 0.030970121140480304 2.921977074896845e-07 6.534323195754513 -0.21764291382490597 FDLDEEMGPPGS(ph)SPTPEPPQK ddPTM_A549_PD325901_60min_R1 1 FDLDEEMGPPGSSPTPEPPQK 21 0 Q969S2-2;Q969S2 Q969S2-2 NEIL2 Endonuclease 8-like 2 1 FDLDEEMGPPGS(0.333)S(0.333)PT(0.333)PEPPQK 60.333999999999996 0.00062796 1693200.0 603.0 944.98 961.47 872.46 1009.8 770.56 1057.6 767.25 949.88 1196.2 839.88 True False 664.2161160948617 1024.6167810075985 1026.721135988792 926.3498726995766 938.8751316208811 764.2848148383542 1097.847546740926 751.946596854019 909.9598468966789 1120.6717278552312 736.5800844379808 0.9017568220048556 1.3910460011817902 1.3939029274355037 1.2576363280394587 1.2746409405533328 1.037612652019383 1.4904659655285093 1.020861971075098 1.2353848089593529 1.5214526587564703 1.0 9.524698580128062 -11.105282625935978 0.4013863039908463 0.8926530589826965 1.2484508666187426 0.0 0.2300578625779707 3.447403573803747 0.5684561890003725 0.5344597354492427 0.04630654222644108 7.84724792844764e-12 11.105282625935978 0.35579780763604607 FDLDEEMGPPGS(ph)SPTPEPPQKEVQK ddPTM_A549_PD325901_60min_R1 1 FDLDEEMGPPGSSPTPEPPQKEVQK 25 1 Q969S2-2;Q969S2 Q969S2-2 NEIL2 Endonuclease 8-like 2 1 FDLDEEMGPPGS(0.45)S(0.45)PT(0.101)PEPPQKEVQK 68.55199999999999 4.187e-05 2978800.0 1846.6 2270.4 1990.2 1965.4 2448.1 2406.6 2088.5 2521.4 2380.9 2771.6 2293.0 True False 2034.065472604928 2461.734575969492 2125.26694004482 2086.7982942527433 2276.1539014865125 2387.0014475056855 2167.9790103710525 2471.108698999964 2280.8390528027785 2596.6007029957846 2010.9755365246097 1.0114819577170107 1.2241494395421086 1.0568338109760052 1.0377044654949763 1.131865534983179 1.1869868151807197 1.0780732888067739 1.228810919933199 1.1341953252919974 1.2912144657330138 1.0 10.973679816057068 -10.615798798908711 0.9769558963676581 1.002493176498245 1.1232162217159443 0.0 0.10979721156549785 0.4980947689222474 0.8732483408026844 0.039732075371362155 0.011743703447130655 2.422150927302544e-11 10.615798798908711 0.12072304521769928 FDLMYAK ddPTM_A549_MK2206_60min_R1 1 FDLMYAK 7 0 Q9BQE3;F5H5D3;Q9NY65;C9J2C0;Q9NY65-2;V9GZ17;A6NHL2-2;A6NHL2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P68363-2;Q6PEY2;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA8;TUBAL3;TUBA1A;TUBA1B;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 108.09 0.0032823 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FDLMYAK ddPTM_A549_PD325901_60min_R1 1 FDLMYAK 7 0 Q9BQE3;F5H5D3;Q9NY65;C9J2C0;Q9NY65-2;V9GZ17;A6NHL2-2;A6NHL2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P68363-2;Q6PEY2;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA8;TUBAL3;TUBA1A;TUBA1B;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 50.038999999999994 0.032257 3060300.0 1923.7 2092.1 2108.2 1995.4 2846.6 2619.1 2172.3 2786.7 2193.5 2460.1 2112.5 False True 2118.9926078469084 2268.4086092255875 2251.275129636462 2118.651326117799 2646.664636236881 2597.770917959837 2254.9680652281727 2731.1170823761404 2101.314823101724 2304.7688661567067 1852.6758922408364 1.1437470615996186 1.2243958151157872 1.2151478513133318 1.1435628514360714 1.4285632189209871 1.4021723545059994 1.2171411495513975 1.474147255768961 1.1342053037459 1.2440216207320849 1.0 10.855394802533183 -9.073769050373473 3.132494565337598 1.0519185810780705 1.2800171275833339 0.1815423866123015 0.12363064920425955 0.15411243913332393 3.1468730830065197 0.021390076319383822 0.02110893727137954 8.437833465711301e-10 9.073769050373473 0.2280985465052634 FDLSHGS(ph)PQMVR ddPTM_A549_MK2206_60min_R1 5 FDLSHGSPQMVR 12 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 FDLS(0.003)HGS(0.997)PQMVR;FDLS(0.03)HGS(0.97)PQMVR;FDLSHGS(1)PQMVR;FDLS(0.035)HGS(0.965)PQMVR;FDLS(0.156)HGS(0.844)PQMVR 127.3 2.9209e-08 72825300.0 4339.01 4806.24 4184.21 4082.7299999999996 6676.629999999999 4749.22 4891.17 4389.1900000000005 7171.08 6883.500000000001 6935.16 True False 5071.328809390525 5050.857086889155 4777.593895494236 5082.999033280715 5694.506571478277 5251.779308122907 5779.832276670023 5011.371123830627 5546.841829861639 5328.512569201628 5212.968371321212 0.9728293839820884 0.9689023080738604 0.9164824252105271 0.9750680746970355 1.0923731290614027 1.0074450742911105 1.108741098155779 0.9613277439779496 1.0640467071270199 1.0221647609672975 1.0 12.34788939134904 -6.5415031936604615 22.61485688544781 1.0334714571168226 0.9529245918990497 0.45322302764321587 0.04175639219044837 52.96844381540589 64316.99020890904 0.005826193476374046 0.012131024780443856 2.874066458586731e-07 6.5415031936604615 -0.08054686521777299 FDLSHGS(ph)PQMVR ddPTM_A549_PD325901_60min_R1 5 FDLSHGSPQMVR 12 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 FDLS(0.015)HGS(0.985)PQMVR;FDLS(0.001)HGS(0.999)PQMVR;FDLS(0.004)HGS(0.996)PQMVR;FDLS(0.011)HGS(0.989)PQMVR;FDLS(0.096)HGS(0.904)PQMVR 129.38 2.4628e-08 139694400.0 8185.129999999999 7772.66 6585.1 7810.17 8539.2 7327.109999999999 7022.159999999999 7633.870000000001 7462.450000000001 9255.890000000001 18015.56 True False 9016.078372025771 8427.689336352641 7032.004485423146 8292.586462716972 7939.436050640756 7267.440445455576 7289.392141473395 7481.606474194836 7148.829177868918 8671.471525779934 15799.760330044182 0.5706465277755615 0.5334061504924786 0.4450703262916826 0.5248552059962661 0.5025035750411635 0.45997156245693843 0.46136093138148326 0.4735265800183131 0.452464406328683 0.5488356370375199 1.0 13.947615053567066 -10.676879333150245 0.7836281496230252 1.0253259928095355 0.48738609258561627 0.17401350452269526 0.13643051611239074 0.11827347362800937 0.11968105375610869 0.03955232795720033 0.008731615769094455 2.1043630467490582e-11 10.676879333150245 -0.5379399002239192 FDPFGPIGT(ph)SPPGPRPDR ddPTM_A549_MK2206_60min_R1 4 FDPFGPIGTSPPGPRPDR 18 1 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.5)S(0.5)PPGPRPDR;FDPFGPIGT(0.542)S(0.458)PPGPRPDR;FDPFGPIGT(0.581)S(0.419)PPGPRPDR;FDPFGPIGT(0.5)S(0.5)PPGPRPDR 88.264 2.8179e-06 42937900.0 4857.48 5011.8 4772.14 4612.33 8157.099999999999 6939.200000000001 6234.9 7309.200000000001 9333.2 8179.900000000001 9450.8 True False 5677.303870016036 5266.879212871405 5448.901210131392 5742.351057055361 6957.201395645027 7673.501538131837 7367.700624147179 8345.301483486213 7219.245102057796 6332.054908812725 7103.905531189263 0.7991806542317013 0.741406144795633 0.7670289513575771 0.8083371930896209 0.9793488054000522 1.0801806843350883 1.0371338120699578 1.1747483756430428 1.0162360789233673 0.8913484112383288 1.0 12.794396681300702 -6.771049090048345 3.050687583354276 1.028963832114537 0.7685305630696534 0.7756132358634826 0.06448623676746734 0.07408459934638739 1.4210830179183143 0.007947496270160694 0.016801595033209826 1.694146293469066e-07 6.771049090048345 -0.2604332690448835 FDPFGPIGT(ph)SPPGPRPDR ddPTM_A549_PD325901_60min_R1 2 FDPFGPIGTSPPGPRPDR 18 1 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.5)S(0.5)PPGPRPDR;FDPFGPIGT(0.571)S(0.429)PPGPRPDR 61.097 0.0034728000000000003 43155300.0 3484.6000000000004 4201.1 3619.3 3487.3999999999996 3926.8999999999996 3439.4 3775.8 3978.3999999999996 4246.7 4054.3 4194.7 True False 3838.354026773061 4555.141440761732 3864.92746261894 3702.8087775399476 3651.0880910695605 3411.3906667294345 3919.4901351970407 3899.0476910055754 4068.2259672970567 3798.310806088834 3678.778492394149 1.0433773152444035 1.2382211786274868 1.0506007552804968 1.0065321370110978 0.9924729359536493 0.9273161387081236 1.0654324916002857 1.059875635096495 1.1058632575209646 1.0324923922279683 1.0 11.845011095644015 -5.966141004010667 24.667636354570003 1.0372871793755727 1.1417023965515958 0.33052601123728353 0.06138545496440059 150.27501503448244 109479.66674380406 0.009011034306380962 0.028016241614226854 1.0810828950924105e-06 5.966141004010667 0.10441521717602309 FDPFGPIGT(ph)SPPGPRPDRR ddPTM_A549_PD325901_60min_R1 2 FDPFGPIGTSPPGPRPDRR 19 2 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.5)S(0.5)PPGPRPDRR;FDPFGPIGT(0.5)S(0.5)PPGPRPDRR 57.293 0.0022651999999999998 6357700.0 1017.5500000000001 947.3199999999999 1060.0300000000002 1207.3000000000002 1362.45 1055.65 1110.53 1117.1 1323.8 1124.53 1225.37 True False 1120.8509269192818 1027.1539810198292 1131.9700102782192 1281.8721790227623 1266.7562121973372 1047.053136399642 1152.791826855334 1094.8185641520029 1268.165289638506 1053.5269838865095 1074.6572582604276 1.042984559313012 0.9557968116109009 1.0533311914819847 1.1928195423885735 1.178753693291817 0.9743135575099832 1.0727065006022334 1.0187606846151216 1.1800648810499026 0.9803376618810334 1.0 10.069660897359752 -5.991143469663016 21.96087063986976 1.086964044527861 1.000683790000119 0.10344402695035115 0.07895898035004949 67.26746456058129 166782.04243461226 0.011624356495841913 0.03601232228167425 1.0206022709210672e-06 5.991143469663016 -0.0862802545277419 FDPFGPIGTS(ph)PPGPRPDR ddPTM_A549_PD325901_60min_R1 1 FDPFGPIGTSPPGPRPDR 18 1 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.163)S(0.837)PPGPRPDR 84.499 2.9275e-05 43680000.0 2318.6 2400.9 1886.9 2432.8 2466.6 2324.8 2534.1 2301.4 2358.1 2412.7 2685.4 True False 2553.982565136894 2603.2322689592825 2014.956380851457 2583.068530710326 2293.354525308047 2305.867599584985 2630.5365622127265 2255.4967715866273 2258.997257513643 2260.3617102460425 2355.1128241531574 1.0844417044246046 1.1053535279760294 0.8555668162420148 1.0967918412312734 0.9737769255843116 0.9790900783762324 1.1169471522701275 0.9577022164098021 0.959188551115773 0.9597679088087064 1.0 11.201580459976721 FDPFGPIGTS(ph)PPGPRPDRR ddPTM_A549_MK2206_60min_R1 1 FDPFGPIGTSPPGPRPDRR 19 2 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.272)S(0.728)PPGPRPDRR 55.128 0.0019527999999999998 4629900.0 589.14 408.73 568.73 416.22 650.8 797.25 727.79 601.35 690.49 861.64 1058.2 True False 688.5724289098978 429.53261117301776 649.384465928918 518.1939186848259 555.068182109547 881.6144658282811 860.0200223336501 686.593204057138 534.0951174859523 666.9949255650307 795.4197351657505 0.8656717937309064 0.5400074855868534 0.8164047699842379 0.6514722928980937 0.6978305384815242 1.1083638321402338 1.0812153436882455 0.8631835164538191 0.6714632462251605 0.8385446023991868 1.0 9.635572547080722 FDS(ph)PRGPPPPR ddPTM_A549_PD325901_60min_R1 2 FDSPRGPPPPR 11 1 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 FDS(1)PRGPPPPR;FDS(1)PRGPPPPR 141.34 8.8666e-12 83250000.0 8445.7 8631.8 7902.5 8172.1 8796.0 9376.9 9348.0 9130.099999999999 9393.099999999999 8880.8 8632.2 True False 9303.10124660427 9359.232079304738 8438.811171592904 8676.872056814302 8178.199304552664 9300.53763530129 9703.743255421876 8947.99299307511 8998.340672385144 8320.064772393187 7570.494124024307 1.2288631487186132 1.236277569994279 1.1146975393340666 1.146143424017595 1.0802728554533656 1.2285245167533834 1.2817846624605238 1.1819562694962578 1.188606783780426 1.0990121167903932 1.0 12.886171752246215 -10.567478661262093 0.78087840967608 0.9951070005529565 1.1865979049877609 0.3944129263246394 0.06174326139722473 0.3933523933665059 0.4134650906237665 0.04518583314177922 0.01140598738317126 2.707206217227203e-11 10.567478661262093 0.19149090443480432 FDSSLLSS(ph)DDETK ddPTM_A549_MK2206_60min_R1 2 FDSSLLSSDDETK 13 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 FDSSLLS(0.055)S(0.945)DDETK;FDSSLLS(0.02)S(0.98)DDETK 226.59 3.5932e-46 12222900.0 7031.6 7764.299999999999 7882.3 6887.4 9772.099999999999 7050.700000000001 6873.1 7171.7 10302.7 11060.5 10646.900000000001 True False 8218.362173885389 8159.469705993343 9000.128665256814 8574.813309187139 8334.63703502259 7796.800394124127 8121.853303152567 8188.310437410122 7969.154900031165 8561.92536814913 8002.980890508634 1.0269126324707576 1.0195538159625375 1.124597045574703 1.0714524283516267 1.0414415764640015 0.9742370375232268 1.0148535169920139 1.023157564592124 0.9957733260968316 1.06984203577237 1.0 12.966321749029932 -7.060574959889797 5.064406993937955 1.0000522304387451 1.0618058441628506 0.25213228926779985 0.03485509957239239 0.12973896627742812 6.818982753740317 0.004093523570051181 0.007284071068174378 8.698112893532768e-08 7.060574959889797 0.06175361372410548 FDT(ph)DDELSYR ddPTM_A549_PD325901_60min_R1 1 FDTDDELSYR 10 0 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 FDT(1)DDELSYR 149.49 3.1617000000000004e-08 4631800.0 2037.7 1957.7 2351.3 2474.6 1939.2 1689.9 1720.0 1720.3 2065.7 2166.0 2477.1 True False 2244.5658039245436 2122.682249548748 2510.8733575155184 2627.4504217756353 1802.9972818768204 1676.1380146845597 1785.4555412201137 1685.9872669507567 1978.8858126652526 2029.2383903481266 2172.432403630663 1.0332039791771326 0.9770993316069259 1.1557889457546473 1.209450944197171 0.8299440198293735 0.7715489843934041 0.8218693194946748 0.7760827283431521 0.9109078880236058 0.9340858601431168 1.0 11.085095572190133 -6.769041761561429 24.99999682823456 0.9108495804269092 1.0899655685085103 0.5565831556480099 0.09297502044619795 142.19576528629642 467604.251415084 0.01626995268580718 0.031166367576827697 1.7019948374701747e-07 6.769041761561429 0.17911598808160112 FDVQLKDLEK ddPTM_A549_PD325901_60min_R1 1 FDVQLKDLEK 10 1 I3L3P7;P62244;H3BVC7 I3L3P7 RPS15A 40S ribosomal protein S15a 0 85.81299999999999 0.00081615 3940700.0 1549.3 1357.6 1961.5 1949.8 1871.3 2378.5 2299.6 2476.6 2435.7 2111.6 2082.1 False True 1706.5837954656217 1472.0097164976144 2094.6191854577014 2070.2347176829135 1739.866343634537 2359.130284589163 2387.112536389403 2427.202270144884 2333.3359993749123 1978.2732156320894 1826.0148995193597 0.9345946716616746 0.8061323688459903 1.14709862773247 1.1337447017698687 0.9528215482209381 1.2919556599511475 1.3072798787226405 1.3292346468715934 1.2778296606391815 1.0833828443310112 1.0 10.834482821821569 -5.771147577522858 24.01343457283808 1.15837296076031 0.8703635419916244 0.4673191963953345 0.12263140822945442 85.33444153054275 211080.5026936637 0.020215662937709836 0.0640970014792428 1.6937621456632291e-06 5.771147577522858 -0.2880094187686856 FDVSGYPTLK ddPTM_A549_MK2206_60min_R1 1 FDVSGYPTLK 10 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 57.858999999999995 0.034212 1164600.0 2041.2 2328.6 2434.4 2374.1 3391.9 2542.4 2646.8 2136.1 3496.5 3438.2 3322.6 False True 2385.70465745134 2447.1157937452313 2779.6345257984585 2955.754606577399 2892.956003222761 2811.4350804914643 3127.6892992658636 2438.89871653189 2704.5483327631578 2661.508232066396 2497.506720905048 0.9552345294938013 0.9798235068846758 1.112963782051875 1.1834821431456612 1.1583376248831114 1.1256967026189442 1.2523246776819281 0.9765333947321992 1.0828993212010585 1.0656660940243303 1.0 11.286272845043479 -10.087573624322639 0.6796584872281606 1.0030192945225656 1.0994671473173065 0.05088230164502905 0.08939636703382489 1.121474894764418 1.0114101356514884 0.05376883480175119 0.01991721953785189 8.173844580609921e-11 10.087573624322639 0.096447852794741 FDWAARFS(ph)PK ddPTM_A549_PD325901_60min_R1 2 FDWAARFSPK 10 1 Q14669-3;Q14669;Q14669-2;G5E9G6 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 FDWAARFS(1)PK;FDWAARFS(1)PK 61.375 0.0021054000000000003 9441200.0 2804.2 3294.8 3485.5 4140.1 3714.2 5314.5 4050.5 4349.1 4498.2 4468.299999999999 4714.200000000001 True False 3088.8803196570675 3572.464359101604 3722.0469900141784 4395.824574150699 3453.327405294395 5271.220474016858 4204.643994018649 4262.3537886970535 4309.156296911863 4186.17077543515 4134.383285775981 0.7471199707787414 0.8640863974543399 0.900266553132504 1.063235861385708 0.8352702607847935 1.2749714067759697 1.0169942415557829 1.0309527429063834 1.0422730547835695 1.012526049492639 1.0 12.013456427381822 -5.605396327361676 0.9728245289277142 1.0315171254427373 0.6880569371458799 0.48181080910230156 0.09662842318755444 0.7675751077814965 0.7807933066166173 0.01349928350983427 0.2416725738044551 2.4808680876156454e-06 5.605396327361676 -0.3434601882968574 FDWGPAPPTTFKPNS(ph)PDLAK ddPTM_A549_MK2206_60min_R1 2 FDWGPAPPTTFKPNSPDLAK 20 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 1 FDWGPAPPT(0.197)T(0.197)FKPNS(0.606)PDLAK;FDWGPAPPTTFKPNS(1)PDLAK 119.33 7.2944e-15 80102000.0 4727.700000000001 3788.6 4516.7 3518.8 6311.2 5533.1 4793.299999999999 4653.7 7166.9 6949.0 7787.9 True False 5525.620178832405 3981.4235575810308 5157.235977108897 4380.906157964933 5382.830840396088 6118.608969425479 5664.180564519822 5313.376226358532 5543.608593187547 5379.2160737098975 5853.949494894487 0.9439131963218279 0.6801260518310627 0.8809840231123914 0.7483676040911754 0.9195212300841878 1.0452104130317172 0.9675827523725355 0.9076566565858802 0.9469860643694308 0.9189037381346342 1.0 12.515194583572471 -6.937879271294752 5.699237891018985 0.9729593263736679 0.8097211562833354 0.48560217818719975 0.07235962006234777 0.1078014188241438 6.895457078960442 0.009284527705338969 0.01768343961217081 1.1537739486923434e-07 6.937879271294752 -0.16323817009033248 FDWGPAPPTTFKPNS(ph)PDLAK ddPTM_A549_PD325901_60min_R1 2 FDWGPAPPTTFKPNSPDLAK 20 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 1 FDWGPAPPT(0.002)T(0.002)FKPNS(0.996)PDLAK;FDWGPAPPTTFKPNS(1)PDLAK 138.93 4.1169e-18 129183000.0 9542.0 8464.6 7974.1 8913.7 8630.599999999999 8860.0 7517.5 7914.5 10816.8 9624.2 10449.5 True False 10510.69681555086 9177.941548516286 8515.270378158677 9464.27900451851 8024.416429953639 8787.847097523643 7803.582576233844 7756.639088694858 10362.207512435252 9016.526369523752 9164.27774483817 1.146920369307998 1.0014909853300564 0.9291807401794375 1.0327359414493213 0.8756190780526525 0.958924133707476 0.8515218322174113 0.8463993895278685 1.1307173135680904 0.9838774664596303 1.0 13.161805468209575 -8.773777814382703 24.999965152059307 1.0617276140930925 0.952594994703143 0.12935181759705405 0.09005714164558797 250.56320222738893 507686.0131875421 0.016295605025776226 0.017408077930509715 1.6835351395368554e-09 8.773777814382703 -0.10913261938994945 FEADLKDKMEGS(ph)DFESSGGR ddPTM_A549_MK2206_60min_R1 1 FEADLKDKMEGSDFESSGGR 20 2 A0A1B0GW41;Q8WYH8-2;Q8WYH8;E9PEN0 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 FEADLKDKMEGS(0.999)DFES(0.001)SGGR 120.57 4.517100000000001e-15 25466000.0 3680.9 5314.2 4792.4 4696.5 7006.6 5689.7 4910.3 6003.7 7938.3 7994.2 5980.3 True False 4302.145930635235 5584.670081216571 5472.034382778725 5847.1427108338985 5975.938421586892 6291.780277482809 5802.437950047297 6854.7428605601335 6140.287724860225 6188.304667786971 4495.226462116557 0.9570476519684816 1.2423556695711064 1.2172989345240333 1.3007448590433859 1.329396521387523 1.3996581330232587 1.2907999183016121 1.5248937775056186 1.3659573720272813 1.3766391348553406 1.0 12.134178082836218 -10.763478179622819 1.0694883875770338 1.0039109997384466 1.3017204528122657 0.0 0.17168710459879188 0.40542915506926835 0.8401329559692041 0.08755689694144232 0.02347529498306471 1.7239387051778813e-11 10.763478179622819 0.2978094530738191 FEADLKDKMEGS(ph)DFESSGGR ddPTM_A549_PD325901_60min_R1 6 FEADLKDKMEGSDFESSGGR 20 2 A0A1B0GW41;Q8WYH8-2;Q8WYH8;E9PEN0 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 FEADLKDKMEGS(0.993)DFES(0.003)S(0.004)GGR;FEADLKDKMEGS(1)DFESSGGR;FEADLKDKMEGS(0.999)DFES(0.001)SGGR;FEADLKDKMEGS(0.997)DFES(0.001)S(0.001)GGR;FEADLKDKMEGS(1)DFESSGGR;FEADLKDKMEGS(0.999)DFES(0.001)S(0.001)GGR 114.2 8.8948e-15 143595700.0 26433.7 27230.399999999998 24781.399999999998 28597.799999999996 31711.4 32115.100000000002 28998.2 33884.3 31695.5 31738.0 32559.1 True False 29117.229764538573 29525.201373097123 26463.214826663992 30364.22115568387 29484.100662391003 31853.565273327476 30101.742369423908 33208.4510547809 30363.448359070317 29734.057263559036 28554.537109140194 1.0197058930861906 1.0339933461448487 0.9267604207876731 1.0633764098373146 1.032553970309442 1.1155342897549994 1.054184217883485 1.1629833440427582 1.0633493459556413 1.0413076265222063 1.0 14.80143237714456 FEALDIEKAEHMETNAVGPS(ph)PSSDTR ddPTM_A549_MK2206_60min_R1 3 FEALDIEKAEHMETNAVGPSPSSDTR 26 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 FEALDIEKAEHMETNAVGPS(0.95)PS(0.02)S(0.025)DT(0.004)R;FEALDIEKAEHMETNAVGPS(0.888)PS(0.039)S(0.054)DT(0.019)R;FEALDIEKAEHMETNAVGPS(0.936)PS(0.027)S(0.035)DT(0.002)R 131.08 3.5797e-24 25881400.0 4643.4 5813.4 5497.8 5549.799999999999 5768.5 5179.299999999999 5124.0 4594.7 8287.199999999999 6366.9 7312.6 True False 5427.092399769527 6109.277228960976 6277.470709799033 6909.501249139991 4919.961291485743 5727.370088258905 6054.964473869689 5246.012795678609 6410.162431939034 4928.6128679959065 5496.679602507155 0.9873401384526964 1.1114486691519005 1.1420477749759586 1.2570318353626464 0.8950787834243861 1.0419690617671304 1.1015676575196212 0.9543966858257098 1.16618811637033 0.8966527475510595 1.0 12.424344672834291 -11.219133777099788 1.6778088679053769 0.9999583830318989 1.0876605906070507 0.12865336792513848 0.10318663130033602 0.7623921926702508 3.864740189944602 0.07240368732816366 0.014963470558685058 6.037626218238756e-12 11.219133777099788 0.08770220757515179 FEALDIEKAEHMETNAVGPS(ph)PSSDTR ddPTM_A549_PD325901_60min_R1 7 FEALDIEKAEHMETNAVGPSPSSDTR 26 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 FEALDIEKAEHMETNAVGPS(0.73)PS(0.197)S(0.054)DT(0.02)R;FEALDIEKAEHMETNAVGPS(0.8)PS(0.073)S(0.091)DT(0.035)R;FEALDIEKAEHMETNAVGPS(0.956)PS(0.018)S(0.022)DT(0.004)R;FEALDIEKAEHMETNAVGPS(0.911)PS(0.033)S(0.043)DT(0.013)R;FEALDIEKAEHMETNAVGPS(0.901)PS(0.036)S(0.049)DT(0.014)R;FEALDIEKAEHMET(0.02)NAVGPS(0.663)PS(0.127)S(0.154)DT(0.037)R;FEALDIEKAEHMETNAVGPS(0.614)PS(0.125)S(0.154)DT(0.107)R 145.86 1.1045e-32 70012600.0 11617.3 9939.199999999999 12058.2 13036.8 13209.3 13041.2 13403.600000000002 13821.2 13777.900000000001 13878.1 14126.099999999999 True False 12796.67974379575 10776.811265625427 12876.541963847074 13842.053527278995 12281.524337611118 12934.996790996072 13913.681332731358 13545.525323478349 13198.862776937882 13001.834397548639 12388.679252725819 1.03293333233889 0.8698918622220573 1.0393797192718435 1.1173147068307057 0.9913505779810124 1.044098125968517 1.1230964212484555 1.0933792898462518 1.0653970861368296 1.049493181017493 1.0 13.59673477065124 -5.90090852724654 11.165608759521843 1.0464344720517498 0.9515729090551671 0.35326870286926104 0.05390390635897707 0.3403655565345871 35.97384592645822 0.007567214713909002 0.023560234989809387 1.2562945413590966e-06 5.90090852724654 -0.09486156299658266 FEDEDS(ph)DDVPR ddPTM_A549_MK2206_60min_R1 2 FEDEDSDDVPR 11 0 P49756 P49756 RBM25 RNA-binding protein 25 1 FEDEDS(1)DDVPR;FEDEDS(1)DDVPR 159.99 2.344e-13 7809100.0 2304.9 2386.0 2221.58 1889.04 3026.0 2611.0 2931.2 2851.8 3835.3999999999996 2937.7 2771.1 True False 2693.9107706053283 2507.4372085700084 2536.633449648101 2351.8548848022283 2580.879408517962 2887.2942869584726 3463.7610979326378 3256.051383271217 2966.6880238752497 2274.0715296787416 2082.9593915307246 1.293309308649377 1.2037859301363256 1.2178026417423242 1.1290930079409267 1.2390445147475133 1.3861500606772073 1.6629038050459495 1.5631852433178792 1.424265895887241 1.0917502947609423 1.0 11.024418998160513 -10.763090206473583 1.0904660153941597 1.006148799566279 1.3482567385287378 0.3584862062676244 0.1537741762847391 0.43989861450810847 0.9540823727644818 0.10977795934762656 0.030004779955617098 1.725479458738943e-11 10.763090206473583 0.34210793896245884 FEDEDS(ph)DDVPR ddPTM_A549_PD325901_60min_R1 2 FEDEDSDDVPR 11 0 P49756 P49756 RBM25 RNA-binding protein 25 1 FEDEDS(1)DDVPR;FEDEDS(1)DDVPR 184.03 1.3119000000000001e-18 11132100.0 3386.0 3896.7 3099.6000000000004 2796.3 4213.299999999999 2265.5 3112.8 3078.2 3367.6000000000004 3436.0 3945.8999999999996 True False 3729.7442273585452 4225.0885844698405 3309.9574954089667 2969.021100141927 3917.372343095921 2247.050519124132 3231.25930738952 3016.8028861988146 3226.0714831444575 3219.0503736085698 3460.579315121001 1.077780304315358 1.220919447217498 0.9564749696520776 0.8579549346459969 1.1319990054783495 0.6493278478853656 0.9337336362355669 0.871762387591261 0.9322345160673354 0.9302056333582442 1.0 11.756797855787728 -5.809694336237914 8.628743518885493 0.9403002763984123 1.1489936762329 0.3608317807675159 0.11565775998154 0.20036290520279162 32.98992764108507 0.015057737461017644 0.047377573492460016 1.5499070858025942e-06 5.809694336237914 0.20869339983448776 FEDENFILK ddPTM_A549_MK2206_60min_R1 2 FEDENFILK 9 0 P62937;P62937-2;F8WE65;C9J5S7 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 139.96 0.00011524 17182400.0 2103.0 2341.8 2297.0 2249.7 3056.9 2891.3 2841.3 2924.4 3834.2000000000003 3137.0 2968.9 False True 2457.934986586405 2460.9876173634752 2622.7491397301437 2800.8766009928718 2607.2340594509446 3197.2554469103884 3357.527431617084 3338.942655599389 2965.7598219592455 2428.3495212588787 2231.640192528441 1.101402903037686 1.102770789665329 1.1752562749636526 1.2550753523664977 1.1683039533792217 1.4326930737378003 1.5045110958559214 1.4961832408191118 1.3289596736466058 1.0881456291157612 1.0 11.123888724777531 -4.228435166309961 16.44930128667116 1.2171273229103252 1.18113111710711 0.0 0.1692936595012286 0.0 0.0 0.026451572560632377 0.0 5.9096918187637336e-05 4.228435166309961 -0.035996205803215275 FEDENFILK ddPTM_A549_PD325901_60min_R1 2 FEDENFILK 9 0 P62937;P62937-2;F8WE65;C9J5S7 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 139.96 0.00011524 23044000.0 6174.299999999999 5044.4 5768.4 5178.1 6662.8 4608.2 5551.6 5660.4 5370.299999999999 5989.3 5747.0 False True 6801.110390720572 5469.509291323338 6159.878312207087 5497.939476681653 6194.827913412171 4570.67234704384 5762.869175952088 5547.4988815021 5144.604966721309 5611.134575859666 5040.155433234599 1.3493850498884024 1.085186630407784 1.2221603864811543 1.0908273662412162 1.2290946173135266 0.9068514667037837 1.1433911616994867 1.1006602782370751 1.0207234746765892 1.1132860186930054 1.0 12.299252510311684 -2.0000000000420837 0.21873149556976815 0.9924422830347698 2.488816757443993 0.3546130490016072 0.09298390281804525 26.73820285813481 0.30967393739524396 0.04978924722710362 14.298363525790835 0.009999999999030987 2.0000000000420837 1.4963744744092233 FEEESKEPVADEEEEDS(ph)DDDVEPITEFR ddPTM_A549_PD325901_60min_R1 3 FEEESKEPVADEEEEDSDDDVEPITEFR 28 1 P54105;E9PJF4 P54105 CLNS1A Methylosome subunit pICln 1 FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR 458.11 0.0 4667763000.0 25087.1 26859.1 23937.3 30047.32 30066.4 30229.2 28701.6 28677.3 32940.93 30679.4 32748.6 True False 27633.923923853083 29122.610619019655 25561.829124678352 31903.274713985113 27954.639787449072 29983.023417659333 29793.85509411817 28105.308754593363 31556.537267269803 28742.29744822086 28720.729810479657 0.9621595309799538 1.013992708792287 0.890013216702847 1.1108100290106209 0.9733262341143207 1.0439506104304874 1.0373641370090445 0.9785722347604922 1.0987373049188818 1.000750943234504 1.0 14.809804788897821 -6.2616471737455806 24.99999994090228 1.040045614328442 0.9612489114996396 0.29235072037634646 0.050190726097218114 17.190323984081168 2068375.1576879404 0.007190139946825508 0.017772665318270438 5.474605460536177e-07 6.2616471737455806 -0.07879670282880236 FEEILQEAGS(ph)RGGEEPGR ddPTM_A549_PD325901_60min_R1 1 FEEILQEAGSRGGEEPGR 18 1 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035;C9JVC2;C9J459 P04920-2 SLC4A2 Anion exchange protein 2 1 FEEILQEAGS(1)RGGEEPGR 45.784 0.019525999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FEELNADLFR ddPTM_A549_MK2206_60min_R1 2 FEELNADLFR 10 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 160.36 2.6570999999999997e-08 17750200.0 1831.4299999999998 1709.85 1893.81 1654.28 2347.0 2208.7 2381.0 2165.58 2699.7 2475.3999999999996 2230.95 False True 2140.5306098354445 1796.8740616401626 2162.380735007548 2059.578674263452 2001.759409052101 2442.423167983599 2813.5968798367935 2472.5575968106027 2088.2222605350175 1916.2054207600352 1676.9435439123329 1.2764476285478021 1.071517325769972 1.2894773606764862 1.2281741277100038 1.1936951701915786 1.4564731036117002 1.6778125238925052 1.4744429565243986 1.2452549569219042 1.142677359483135 1.0 10.711618404519193 -9.926334602082562 1.0406210750129183 1.0351231265537224 1.324175252818043 0.2646141946884678 0.1592443458800644 0.40210446213084716 0.884155379715665 0.0590728089695218 0.033591996463493215 1.1848555247525105e-10 9.926334602082562 0.28905212626432064 FEELNADLFR ddPTM_A549_PD325901_60min_R1 2 FEELNADLFR 10 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 175.93 2.4945e-10 24926000.0 2939.0 2993.0 3719.6 3397.6 4539.0 3696.7 3415.1000000000004 3409.2 4212.5 3763.2 3715.1 False True 3237.365116422552 3245.2306139344146 3972.034423771837 3607.462035490547 4220.196298699924 3666.595300836978 3545.0634993144254 3341.200831534339 4035.4632743633547 3525.5909097682697 3258.166251959258 0.9936156924085144 0.9960297796292426 1.219101211113246 1.107206249319305 1.2952673290266148 1.1253554967098798 1.0880548213838521 1.0254850652649015 1.238568864291894 1.0820782726014055 1.0 11.669844505700997 -5.726641321452418 23.094618590295834 1.1252836331268286 0.9948218625636217 0.2741719708352428 0.08515647921495659 100.10253390686594 66432.32141856197 0.013980577587299828 0.05413769502907506 1.8765436829350846e-06 5.726641321452418 -0.13046177056320685 FEELNRT(ph)LKK ddPTM_A549_MK2206_60min_R1 1 FEELNRTLKK 10 2 Q9Y262-2;Q9Y262;B0QY90;B0QY89 Q9Y262-2 EIF3L Eukaryotic translation initiation factor 3 subunit L 1 FEELNRT(1)LKK 54.7 0.0064459 2361900.0 964.81 1275.1 1388.6 1266.6 1709.3 1477.4 1380.6 1191.0 1889.0 2048.9 1803.6 True False 1127.6463406602134 1339.9971436075516 1585.5243602217133 1576.9170568598338 1457.8642342960181 1633.7374873812507 1631.43714922414 1359.8278972845276 1461.144516113142 1586.0520669771488 1355.7163431723188 0.8317715917044776 0.9884052444717271 1.16951039810559 1.1631615011514242 1.0753460645644188 1.205073240880444 1.2033764713691113 1.0030327539628148 1.0777656575962826 1.1698996438044365 1.0 10.404839639310904 -2.0887437528254975 19.962750834347855 1.060687068983815 0.009470379031114806 0.0 0.11306434512011378 0.0 0.0 0.014446390473626742 0.0 0.008151851265844752 2.0887437528254975 -1.0512166899527002 FEELNRT(ph)LKK ddPTM_A549_PD325901_60min_R1 2 FEELNRTLKK 10 2 Q9Y262-2;Q9Y262;B0QY90;B0QY89 Q9Y262-2 EIF3L Eukaryotic translation initiation factor 3 subunit L 1 FEELNRT(1)LKK;FEELNRT(1)LKK 73.848 0.0005724 7007200.0 3483.6 2789.7 3376.4 3340.3 4452.6 3802.1 3564.3999999999996 3686.8 4028.7 3895.1 4291.299999999999 True False 3837.2525075092217 3024.797809453 3605.5428079425856 3546.622744628288 4139.8647366361065 3771.1369581822355 3700.04519251452 3613.2638817613497 3859.387749181634 3649.162721258075 3763.4973047919993 1.0195975170816014 0.803719935072512 0.9580298631678856 0.9423741954358333 1.1000047034349898 1.0020299345984673 0.9831401201758038 0.9600814320128886 1.0254790787992698 0.9696201234451945 1.0 11.87785822295254 -6.542849795983067 24.97271862193724 1.0107782003678982 0.9206804708084507 0.26971487945099737 0.05897420514766696 181.2461872998377 226638.00321603304 0.007502146586594329 0.01561847475564488 2.8651687387481397e-07 6.542849795983067 -0.0900977295594475 FEEVEEEPEVIPGPPS(ph)ESPGMLTK ddPTM_A549_MK2206_60min_R1 1 FEEVEEEPEVIPGPPSESPGMLTK 24 0 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 FEEVEEEPEVIPGPPS(0.539)ES(0.44)PGMLT(0.02)K 71.528 3.8124e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FEEVEEEPEVIPGPPSES(ph)PGMLTK ddPTM_A549_PD325901_60min_R1 2 FEEVEEEPEVIPGPPSESPGMLTK 24 0 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 FEEVEEEPEVIPGPPS(0.206)ES(0.779)PGMLT(0.015)K;FEEVEEEPEVIPGPPS(0.215)ES(0.719)PGMLT(0.065)K 84.529 1.5911000000000001e-06 9276500.0 1420.74 1416.62 1601.17 1936.8500000000001 1739.4099999999999 1176.28 1472.78 2038.42 1496.85 1703.7 2190.8 True False 1564.972478906491 1536.0035390283215 1709.8350248173883 2056.484825594498 1617.2398422387373 1166.7007656743906 1528.8274488361403 1997.7621139904454 1433.9425999360913 1596.1280912447398 1921.3454886254312 0.8145190379196734 0.7994416142862515 0.8899154446401195 1.0703357817576828 0.8417225594319026 0.6072311162054834 0.7957066846576842 1.0397724541564277 0.7463221000206279 0.8307345559109421 1.0 10.907901246617449 -11.050698188133959 1.3317993518071234 1.000647287008382 0.8367170760997066 0.0 0.13115586994581577 0.6268855025039562 1.969673697662915 0.09274041945751668 0.02030858191320852 8.898192807255258e-12 11.050698188133959 -0.16393021090867543 FEGLS(ph)PLQR ddPTM_A549_MK2206_60min_R1 2 FEGLSPLQR 9 0 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 FEGLS(1)PLQR;FEGLS(1)PLQR 66.19 0.0054804 13473800.0 2308.6 2090.66 2017.5299999999997 1891.12 3069.9 2624.4 2560.8 2478.4 3443.4 3796.8999999999996 3470.7 True False 2698.2352401490116 2197.065664069144 2303.6460913712476 2354.4444848956014 2618.321776671941 2902.1122660642704 3026.0642124678975 2829.7207897816766 2663.4753979798807 2939.1776529384256 2608.8294035529857 1.034270480267611 0.8421653255965847 0.8830190614357127 0.9024907806118194 1.0036385564751866 1.1124193334036563 1.1599318101623188 1.0846706902060583 1.020946557238458 1.1266270032588317 1.0 11.349186891257078 -6.844926097050636 4.406539532361056 1.0359616842951207 0.9077571331486569 0.49802681870696563 0.0703711179495764 0.1636185973750565 5.865669099461766 0.010360686232433584 0.020293732802059844 1.4291371309841358e-07 6.844926097050636 -0.12820455114646379 FEGLS(ph)PLQR ddPTM_A549_PD325901_60min_R1 2 FEGLSPLQR 9 0 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 FEGLS(1)PLQR;FEGLS(1)PLQR 118.28 0.00016774 22410000.0 5791.1 5546.8 5931.700000000001 5848.6 6183.5 5326.799999999999 5868.0 6346.6 6410.200000000001 6810.5 6896.0 True False 6379.008208817506 6014.248302496292 6334.260832209758 6209.854738865668 5749.192291916934 5283.420306894908 6091.309951092807 6220.012084188618 6140.801586070973 6380.4838677128 6047.8357173457125 1.0547588438161377 0.9944463744686237 1.0473599363889057 1.0267895870675308 0.9506197854263396 0.873605129805627 1.007188395283689 1.02846908793324 1.0153717582735633 1.0550028416633448 1.0 12.562203235565374 -6.563370244967167 24.991529962356115 0.9952409328900744 1.0298577447872117 0.14340804592677803 0.046916665697065825 262.8403801910881 162225.52789891057 0.00665914676793331 0.013862128798911282 2.732937847231538e-07 6.563370244967167 0.03461681189713728 FEGLT(ph)AR ddPTM_A549_MK2206_60min_R1 2 FEGLTAR 7 0 Q15208 Q15208 STK38 Serine/threonine-protein kinase 38 1 FEGLT(1)AR;FEGLT(1)AR 82.426 0.015862 11720900.0 1973.39 2382.73 2053.9 2472.0 3651.7 2559.33 2509.8999999999996 2720.0 4019.0 3733.3 3541.1 True False 2306.4499872466695 2504.0007795373085 2345.173904262838 3077.640110972297 3114.5397673777397 2830.1566018542426 2965.9163413281667 3105.5683296506454 3108.7029170242035 2889.9449371105447 2661.747140611831 0.866517315659258 0.9407357826490375 0.8810656235827774 1.156248113885404 1.1701110597086353 1.063270270369747 1.1142742659794571 1.1667405525743506 1.1679181953811115 1.0857323346072083 1.0 11.37815780996437 -6.25475643330659 24.956886219192246 1.0990867227663268 0.900569180740891 0.7610264576292056 0.05417981308564295 275.5965537004203 1029187.241396615 0.010227264437673605 0.02641450177869697 5.562161141851658e-07 6.25475643330659 -0.1985175420254358 FEGLT(ph)AR ddPTM_A549_PD325901_60min_R1 2 FEGLTAR 7 0 Q15208 Q15208 STK38 Serine/threonine-protein kinase 38 1 FEGLT(1)AR;FEGLT(1)AR 101.25 0.011654000000000001 21528000.0 5513.8 4765.8 5333.4 6466.200000000001 6549.0 5580.4 6246.5 6108.8 6489.799999999999 7674.4 6164.8 True False 6073.556916954975 5167.430691576555 5695.356596339587 6865.602488194307 6089.020832823487 5534.955072575722 6484.213975715956 5986.95519173911 6217.056274887423 7189.837074278705 5406.568681887008 1.123366274306752 0.9557689905777745 1.0534142690945685 1.2698631779515404 1.1262264832078834 1.0237463719121578 1.1993214841493194 1.107348402286371 1.1499079435938169 1.3298336703584237 1.0 12.400497552248462 -10.882396403542137 1.1134729017034797 0.999554512012777 1.1135159348786472 0.0 0.12618638225849016 0.6512313918988941 1.4244310032317795 0.05767038722679656 0.01365136565590343 1.311002731215439e-11 10.882396403542137 0.11396142286587019 FEGTTS(ph)LGEVR ddPTM_A549_PD325901_60min_R1 1 FEGTTSLGEVR 11 0 Q4G0F5 Q4G0F5 VPS26B Vacuolar protein sorting-associated protein 26B 1 FEGT(0.018)T(0.227)S(0.755)LGEVR 94.76700000000001 0.00028668 4553300.0 1579.7 1719.0 1352.4 1685.1 1499.5 1566.3 1233.8 1638.9 1431.3 1557.0 1723.2 True False 1740.0699810863239 1863.8661628310256 1444.1819966418534 1789.184799860229 1394.1802929941693 1553.5445721051108 1280.7529341612653 1606.2108538078219 1371.1474384798255 1458.6907542807182 1511.25732426481 1.151405490744487 1.2333215084583635 0.9556162100616538 1.1839047997538235 0.9225300487277401 1.0279815006758513 0.8474750881914306 1.062830815122239 0.9072891932198611 0.9652166648656846 1.0 10.56153361613312 -6.124746631080958 0.7849559970584815 0.9571887191373352 1.2111282258465477 0.4231635544282508 0.08896281545852859 0.6792065873609264 0.5701923623946742 0.013382758373202642 0.11622516305913311 7.50331827877503e-07 6.124746631080958 0.2539395067092125 FEHIEDDDEAVVEVNIPGSESS(ph)EAIVR ddPTM_A549_PD325901_60min_R1 1 FEHIEDDDEAVVEVNIPGSESSEAIVR 27 0 Q8NE73;Q9Y227-2;Q9Y227 Q8NE73 ENTPD4 Ectonucleoside triphosphate diphosphohydrolase 4 1 FEHIEDDDEAVVEVNIPGS(0.324)ES(0.309)S(0.368)EAIVR 49.25 0.0031538 1380800.0 703.45 607.33 420.04 554.63 598.43 590.27 604.62 663.33 582.58 591.48 471.41 True False 774.8637261474803 658.5118305248205 448.5464403057112 588.8882354438786 556.3983412714242 585.4630368233946 627.6291449607592 650.099362777682 558.096188576523 554.1338518573918 413.4295585142027 1.8742339781708208 1.5928029744447951 1.0849404235094189 1.4243979979570045 1.3458117103939728 1.4161131558359101 1.518104189783513 1.5724549669695398 1.3499184494263743 1.3403343821105995 1.0 8.691497728991369 -10.113721567073984 0.6161761149988333 0.9908845774581234 1.4665170293082572 0.17169383994215126 0.20782642613394495 0.560289736432654 0.4049093255431801 0.12983802924638282 0.043325207173034064 7.696236998384018e-11 10.113721567073984 0.4756324518501338 FEIHT(ph)PVSDK ddPTM_A549_PD325901_60min_R1 2 FEIHTPVSDK 10 0 Q15361 Q15361 TTF1 Transcription termination factor 1 1 FEIHT(1)PVSDK;FEIHT(1)PVSDK 82.54299999999999 0.00092562 8530000.0 1679.4099999999999 1514.48 1567.49 1773.27 1706.5700000000002 1449.9299999999998 1608.49 1696.9099999999999 1814.5 1816.9 1567.0500000000002 True False 1849.9024668837012 1642.1105446680217 1673.869297483095 1882.8008605116324 1586.7064105468883 1438.12225080276 1669.7019671495016 1663.0637988498572 1738.2428750937224 1702.1806239259058 1374.3127843484044 1.3460563620972104 1.1948593969069325 1.217968221314857 1.3699944306377931 1.1545453324871637 1.0464300901374568 1.2149359200941643 1.2101057472432353 1.2648087792604406 1.2385685728252551 1.0 10.424494673878803 -10.827764350852366 0.8624517126597425 0.9866740070544399 1.222783291986535 0.0 0.10835968313358435 0.48439305580024894 0.5785062877220642 0.07810974048813751 0.01541799592457285 1.4867421330391912e-11 10.827764350852366 0.23610928493209504 FELLPTPPLS(ph)PSRR ddPTM_A549_PD325901_60min_R1 2 FELLPTPPLSPSRR 14 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 FELLPT(0.001)PPLS(0.761)PS(0.239)RR;FELLPTPPLS(0.787)PS(0.212)RR 70.80199999999999 0.00091291 20632000.0 2234.8999999999996 2050.6800000000003 2735.5 2332.56 2936.9 3510.5 2691.5 2977.7 4456.0 2491.2 2241.6 True False 2461.785402753576 2223.498000462085 2921.1474798978024 2476.636933571883 2730.622275754969 3481.9116519025665 2793.9265053453128 2918.3074375395395 4268.729816157412 2333.9052068491474 1965.8974106731641 1.2522451015949043 1.131034604547708 1.485910436647628 1.2597996823872062 1.388995306128384 1.771156334505923 1.4211964928468033 1.4844657822405138 2.1713899173892854 1.187195829333724 1.0 10.94097232201973 -7.022131812587038 11.174840641040836 1.5636439539830498 1.2907243200079896 0.09432308128389533 0.29609896490930465 1.5841633792853038 796.9295390269182 0.061558931612934444 0.10866204648608609 9.503163196620008e-08 7.022131812587038 -0.27291963397506014 FEPES(ph)PGFESR ddPTM_A549_MK2206_60min_R1 2 FEPESPGFESR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 FEPES(0.999)PGFES(0.001)R;FEPES(1)PGFESR 216.68 3.0551999999999996e-31 130715000.0 8491.900000000001 10010.3 9028.2 8783.8 16210.3 11913.099999999999 9986.0 10954.6 17743.8 11912.8 12549.4 True False 9925.12511297817 10519.7815125517 10308.534516025971 10935.83139431976 13825.786343654556 13173.736334724234 11800.326939122313 12507.448097055496 13724.85763102614 9221.690206201081 9433.037634179802 1.052166385620612 1.1152061425509612 1.0928117660289918 1.1593117528435077 1.4656770045693452 1.3965529287183516 1.2509572628402161 1.3259194526836013 1.4549775123651894 0.9775949767005147 1.0 13.20350670816933 -6.531083757456476 24.900188743192064 1.2612098813503103 1.095656840314192 0.21839507011514336 0.1516313082812868 268.22944766081713 814008.7559946899 0.026261508904408648 0.05474077164414956 2.9438538313110377e-07 6.531083757456476 -0.16555304103611834 FEPES(ph)PGFESR ddPTM_A549_PD325901_60min_R1 2 FEPESPGFESR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 FEPES(1)PGFESR;FEPES(0.988)PGFES(0.012)R 176.87 1.7594000000000002e-15 143819000.0 10860.0 10170.1 10064.900000000001 10314.6 12374.5 9934.5 9902.5 10551.6 10885.7 10000.5 10976.3 True False 11962.499205290545 11027.170018969056 10747.964639160438 10951.709415843769 11505.357809707466 9853.596725772974 10279.345056355924 10341.140060429929 10428.21188504146 9369.06672330399 9626.28468449851 1.2426911936807883 1.145527104213574 1.1165226244002737 1.1376880878538351 1.1952023222661263 1.023613683651026 1.0678413732048726 1.074260776546799 1.0833059925844826 0.9732796224478248 1.0 13.232763374372624 -2.0000000000004707 0.12021999279985808 0.971154219141359 1.7037668103520185 0.7125918454706666 0.04181263530427003 35.96756497150759 0.28641049387380424 0.14542417637778715 4.442623405588925 0.009999999999989162 2.0000000000004707 0.7326125912106595 FEPGT(ph)QR ddPTM_A549_MK2206_60min_R1 1 FEPGTQR 7 0 X6R3L3;Q70IA8;K7ESI3;K7EPX7;K7EKK6;K7ELS3;K7ESA9;Q86TA1;Q96BX8 X6R3L3 MOB3C;MOB3A;MOB3B MOB kinase activator 3C;MOB kinase activator 3B;MOB kinase activator 3A 1 FEPGT(1)QR 59.245 0.032619999999999996 2547100.0 1140.0 1242.9 1044.0 942.71 1434.5 1307.8 1072.6 1249.2 1474.9 1344.7 1678.4 True False 1332.4041296759406 1306.1583011448715 1192.054898510348 1173.6739923198597 1223.4869502706588 1446.1905279526195 1267.4775360407154 1426.277925514553 1140.8375049313252 1040.9313360652902 1261.606958516533 1.0561166619139883 1.0353131712912589 0.9448702628527286 0.9303008234037725 0.9697845608820216 1.1463083000533938 1.0046532539191804 1.1305247770602416 0.9042733136735269 0.8250836990383079 1.0 10.30104680725065 -8.803883124781159 24.99992648924018 0.9547957576695026 1.0228286711590455 0.2617235753757746 0.07822683153263228 196.44142728775387 115705.70486642874 0.01274456915454079 0.013567676174133238 1.5707854696044823e-09 8.803883124781159 0.06803291348954288 FEPGT(ph)QRFELYK ddPTM_A549_PD325901_60min_R1 2 FEPGTQRFELYK 12 1 X6R3L3;Q70IA8 X6R3L3 MOB3C MOB kinase activator 3C 1 FEPGT(1)QRFELYK;FEPGT(1)QRFELYK 65.472 0.0023239999999999997 4231300.0 2325.48 2481.0 2254.6 2872.5 2808.8 2311.7 2885.7 2563.0 2784.8 2743.5 3204.8 True False 2561.5610176721057 2690.0825770702586 2407.6107140111812 3049.927801079169 2611.5195778339607 2292.8742816416925 2995.5168926156302 2511.8789543653975 2667.7645404028626 2570.2749417913624 2810.6299169010344 0.9113832462498126 0.9571102054006136 0.8566089400577444 1.0851403035096066 0.9291581086966404 0.8157866205913681 1.0657813305845865 0.8937067592075458 0.9491696236352264 0.9144835918580542 1.0 11.45667778740162 -10.479384856975567 0.530504677096663 1.0080105005044186 0.9393450437034614 0.0 0.07969625161877886 2.541738376052283 1.1087316602659782 0.08531567570193309 0.01713904528577483 3.316004742685774e-11 10.479384856975567 -0.06866545680095726 FES(ph)PESQASAEQPEM ddPTM_A549_MK2206_60min_R1 3 FESPESQASAEQPEM 15 0 O75436 O75436 VPS26A Vacuolar protein sorting-associated protein 26A 1 FES(0.987)PES(0.013)QASAEQPEM;FES(0.998)PES(0.002)QASAEQPEM;FES(0.999)PES(0.001)QASAEQPEM 167.32 7.0358e-22 15030300.0 1362.0200000000002 1790.57 1514.9099999999999 1530.7400000000002 2368.97 1496.87 1814.6999999999998 1843.16 2940.94 1949.01 2297.75 True False 1591.895677808091 1881.7023648571674 1729.747017530948 1905.7713687175312 2020.4976511555824 1655.2677898581112 2144.4075001427245 2104.4335744407663 2274.8217857161376 1508.727287353767 1727.1552603261243 0.921686494766838 1.0894807247970637 1.001500593064421 1.1034163589657136 1.1698413556486338 0.9583781075625829 1.241583515623149 1.2184391425490049 1.3170916581561996 0.8735330992008713 1.0 10.754182062511237 -5.86032713164475 0.6818572204481286 1.1565987198666785 0.9241809536055536 0.07062895609411168 0.13167715264851562 2.1543748751555705 1.075537023602559 0.02250138661872348 0.32909442786336246 1.3793448838021662e-06 5.86032713164475 -0.23241776626112487 FES(ph)PESQASAEQPEM ddPTM_A549_PD325901_60min_R1 2 FESPESQASAEQPEM 15 0 O75436 O75436 VPS26A Vacuolar protein sorting-associated protein 26A 1 FES(0.987)PES(0.013)QASAEQPEM;FES(0.827)PES(0.172)QASAEQPEM 152.99 1.5294e-14 5192200.0 982.68 622.48 594.69 772.74 689.14 646.75 939.14 699.24 610.36 703.4000000000001 967.36 True False 1082.4409501892187 674.9385741937505 635.0492395614783 820.4703947801283 640.7371838039362 641.4830824292789 974.8794866171271 685.2931096568316 584.7086917840751 658.987203957005 848.380852600282 1.2758903585241745 0.7955608287540531 0.7485426357927061 0.9671014995981955 0.7552471061081598 0.7561263086774498 1.1491059512118027 0.8077658843388703 0.6892054317255589 0.7767586950332664 1.0 9.728568250329257 -5.256668499991554 24.38369736174478 0.851999026001536 1.275890606325401 0.4701670050104151 0.13142085328433487 265.8259882528687 1358553.4379852067 0.019819327072000133 0.22068997732527104 5.537726464575504e-06 5.256668499991554 0.423891580323865 FES(ph)PEVAER ddPTM_A549_MK2206_60min_R1 3 FESPEVAER 9 0 A0A087X0X3;P52272-2;P52272 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 FES(1)PEVAER;FES(1)PEVAER;FES(1)PEVAER 85.958 0.0012317 7836500.0 1119.48 1157.1100000000001 921.9000000000001 945.05 1891.98 1267.8600000000001 1351.63 1219.46 1392.8899999999999 1669.79 1821.3600000000001 True False 1308.4208553417732 1216.0019565835892 1052.6392825064077 1176.5872924249063 1613.6722482907517 1402.0241036626455 1597.203675217895 1392.3221894396236 1077.4026389882667 1292.5832792804797 1369.066045021255 0.955703240249056 0.8881981705745325 0.7688739972293048 0.8594087164046491 1.1786664742428108 1.0240733883958673 1.166637417549201 1.0169868681667638 0.7869617706949558 0.9441350795172282 1.0 10.418976329889263 -4.8906866316720725 17.288795168788486 0.9353393187228776 2.5378201320907205 0.0 0.13115559338214308 1843.6376235419107 305356.8769343553 0.019929412908007718 5483.282570576643 1.2862144025086494e-05 4.8906866316720725 1.602480813367843 FESPATGILS(ph)PR ddPTM_A549_MK2206_60min_R1 2 FESPATGILSPR 12 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FESPATGILS(1)PR;FESPATGILS(1)PR 225.63 3.5894999999999996e-40 93668000.0 10011.900000000001 11631.8 9554.1 8951.0 14947.2 10712.4 10659.2 10919.099999999999 14481.4 12412.2 11770.7 True False 11701.663952546089 12223.80893656522 10909.015043925014 11143.995401825667 12748.486680436105 11845.979057684382 12595.838665080366 12466.915863341306 11201.386022043867 9608.275399352719 8847.710335206486 1.3225640882458882 1.381578789703895 1.2329760616728442 1.2595343856909382 1.4408797527771442 1.338875099758555 1.4236269258227707 1.4090556077241148 1.2660208797152548 1.0859617952364262 1.0 13.111088438679348 -10.037199928012704 0.7322623045196063 1.0124312230157577 1.3487145263995062 0.7376364604448282 0.06855420543575919 0.21904875822634648 0.23441969694427395 0.036661586673819246 0.01510343324353667 9.179099382072064e-11 10.037199928012704 0.33628330338374846 FESPATGILS(ph)PR ddPTM_A549_PD325901_60min_R1 2 FESPATGILSPR 12 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FESPATGILS(1)PR;FESPATGILS(1)PR 219.89 2.2821999999999998e-32 93993000.0 15341.099999999999 14529.4 15681.5 14813.8 17350.8 15162.8 16481.2 15309.3 17984.6 21716.7 22560.8 True False 16898.517178479073 15753.843528933738 16745.74089051998 15728.81478141919 16132.139665010496 15039.319184010325 17108.401084858702 15003.944001586484 17228.7698051312 20345.503855804796 19785.96462469447 0.8540658744223352 0.7962130645514083 0.8463444268782304 0.7949480897074065 0.8153324829498731 0.7601003776808561 0.8646735910720292 0.7583124849450281 0.8707571317310613 1.02827960333114 1.0 14.272189782253983 -9.854796205380671 0.6818843087408047 0.9933656368432113 0.809958417834952 0.7931126172505032 0.03840843100908971 0.20058694803607022 0.1931485580413715 0.017082771362571726 0.007816497351258445 1.3970237668907187e-10 9.854796205380671 -0.1834072190082593 FESSYRNS(ph)LDSFGGR ddPTM_A549_PD325901_60min_R1 2 FESSYRNSLDSFGGR 15 1 Q5BKZ1 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 FES(0.001)S(0.001)YRNS(0.997)LDS(0.001)FGGR;FES(0.009)S(0.009)Y(0.006)RNS(0.952)LDS(0.024)FGGR 58.997 0.0020832 12007400.0 2156.1 2162.1 2111.86 2518.6 2863.4 2425.7 2302.8 2585.2 2361.7 2358.7 2656.2 True False 2374.9856847630717 2344.3077548906085 2255.1835192458307 2674.168201844387 2662.284662193734 2405.9459034382708 2390.43431414051 2533.636157949834 2262.44596203298 2209.7712794617405 2329.5042390391054 1.0195240879848009 1.0063547924075078 0.9680959070398897 1.1479559285745071 1.1428546115425389 1.0328145633384624 1.0261558120737904 1.0876289106882804 0.9712134986138569 0.9486015274963597 1.0 11.185807240407934 -8.771200043980587 24.999166124252316 0.9864063706862147 1.0539461828108883 0.30096451118760914 0.05373405143965543 215.2901817894869 551402.8661784847 0.009646127053570213 0.010330256992730295 1.6935575371865587e-09 8.771200043980587 0.06753981212467353 FEVADEDKQS(ph)R ddPTM_A549_MK2206_60min_R1 2 FEVADEDKQSR 11 1 B4E0E3;G3V1M5;Q9H6X4-2;Q9H6X4-3;Q9H6X4 B4E0E3 TMEM134 Transmembrane protein 134 1 FEVADEDKQS(1)R;FEVADEDKQS(1)R 87.18 8.5976e-05 10307800.0 3254.3 3197.7 3012.4 2722.3999999999996 4759.299999999999 3374.0 3428.3 3603.7 5534.4 4875.9 4581.7 True False 3803.5462800038695 3360.4492715189954 3439.603617119321 3389.388122213179 4059.2132746065854 3731.034440520064 4051.1777333660134 4114.535510868389 4280.867236620739 3774.4308035403774 3443.937441512869 1.1044179357488648 0.9757579307372092 0.9987416076897017 0.9841607694024409 1.1786547646531684 1.083363012215773 1.1763215221430947 1.1947184235323787 1.243015388438711 1.0959638110854673 1.0 11.749843221346072 -6.7549360616224865 24.957069018298213 1.1293817916014497 1.0116952916002473 0.41860153802983424 0.06915182327890511 168.62056921963713 647089.7664738905 0.013770198072591867 0.0281377531055332 1.7581824407746744e-07 6.7549360616224865 -0.1176865000012024 FEVADEDKQS(ph)R ddPTM_A549_PD325901_60min_R1 1 FEVADEDKQSR 11 1 B4E0E3;G3V1M5;Q9H6X4-2;Q9H6X4-3;Q9H6X4 B4E0E3 TMEM134 Transmembrane protein 134 1 FEVADEDKQS(1)R 51.726000000000006 0.006708800000000001 8051100.0 1522.6 1880.0 2017.2 2017.6 2230.5 1771.0 1955.7 1884.6 2116.0 2254.5 2384.5 True False 1677.173231121122 2038.4341978605732 2154.099322409011 2142.2225696979413 2073.837374807266 1756.5775631731785 2030.1252337001035 1847.0101745599 2027.071878588215 2112.150485244622 2091.221616590899 0.8020064529818905 0.9747576161648618 1.030067452114719 1.0243881149192517 0.9916870399360289 0.8399767624995882 0.9707843576184936 0.8832206782420738 0.9693242755843062 1.0100079630430758 1.0 11.030130243870632 -9.344473075557392 1.959128334511059 0.9904416101996827 0.9459303320793413 0.10043791112409461 0.06974012455464422 0.6280577354053245 4.935284538035188 0.01481882701159787 0.0130041586264937 4.5240450865168303e-10 9.344473075557392 -0.04451127812034139 FFDENESPVDPQHGS(ph)K ddPTM_A549_PD325901_60min_R1 1 FFDENESPVDPQHGSK 16 0 A0A3B3IRW9;Q6P4E1-5;Q6P4E1 A0A3B3IRW9 CASC4 Protein CASC4 1 FFDENESPVDPQHGS(1)K 110.41 1.4522e-07 2651300.0 2191.0 1955.8 1535.3 1746.3 2238.6 1812.9 1830.2 1997.2 2177.5 1795.5 1911.2 True False 2413.428707071048 2120.622129880698 1639.4946905088989 1854.164984864946 2081.3684587507496 1798.1363434650798 1899.849262523868 1957.3642792269088 2085.987247460225 1682.1318235780539 1676.1345160949995 1.4398776971037928 1.2651861229021466 0.9781402833518024 1.106214905224144 1.2417669577020884 1.0727876111365549 1.1334706399042909 1.1677847215909072 1.2445225770543082 1.0035780585779157 1.0 10.710922220045244 -10.921220737630948 1.1317223579875244 0.9982712133759288 1.1798309814985066 0.27253415950212334 0.11402402507265082 0.5899374234442147 1.3212184911368594 0.0852904286251445 0.01937491138565018 1.1988897919333679e-11 10.921220737630948 0.1815597681225778 FFDGAKDVTGS(ph)PPAK ddPTM_A549_PD325901_60min_R1 1 FFDGAKDVTGSPPAK 15 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 FFDGAKDVT(0.253)GS(0.747)PPAK 56.055 0.0036029000000000005 4509300.0 2914.6 3252.2 3093.0 3793.2 4364.5 5715.4 4575.6 4812.0 4055.9 4207.5 4353.3 True False 3210.488046384884 3526.2743075968933 3302.9095797199443 4027.4973490177576 4057.9525767076043 5668.855677334833 4749.726961864393 4716.020885059025 3885.4446277721854 3941.837731943557 3817.8716978423836 0.84091040780633 0.9236230514476738 0.8651180136793327 1.0549064158687786 1.0628834329348729 1.4848208965582859 1.2440771554865593 1.2352486563978087 1.0176991096814463 1.0324699319181498 1.0 11.898552905477088 -6.321010581399501 4.159931197459226 1.0830947979654038 0.8801631839056934 0.3558630092857763 0.14415777509678665 0.2644001743010555 9.332496097317273 0.02398148362306444 0.05948265678831145 4.775176390026977e-07 6.321010581399501 -0.20293161405971039 FFEHFIEGGR ddPTM_A549_MK2206_60min_R1 1 FFEHFIEGGR 10 0 F5H3F0;J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5GYN4;Q96FW1-2 F5H3F0 OTUB1 Ubiquitin thioesterase OTUB1 0 64.064 0.0067012 1541900.0 160.48 228.29 180.27 340.46 563.51 307.17 270.37 348.66 398.04 313.34 399.34 False True 187.56510064069727 239.9089858945715 205.83499669967463 423.8727152838302 480.6184254771834 339.67452551705617 319.49272927403337 398.0836227264682 307.884575539267 242.55627637591894 300.1728567766874 0.6248569662653932 0.7992361083902099 0.6857215502759628 1.4120954167390587 1.601138859249815 1.1315964047000955 1.0643624900159407 1.3261812776850146 1.0256909263728555 0.8080553284548572 1.0 8.229649716486445 -6.2311713936619055 24.328719988775926 1.1105685621637433 0.7128678381076143 0.4688356140658684 0.21480010463295143 400.86136649609693 322202.36576521926 0.030995821076282733 0.08199386787563469 5.872575464873201e-07 6.2311713936619055 -0.397700724056129 FFEHFIEGGR ddPTM_A549_PD325901_60min_R1 2 FFEHFIEGGR 10 0 F5H3F0;J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5GYN4;Q96FW1-2 F5H3F0 OTUB1 Ubiquitin thioesterase OTUB1 0 ; 78.098 0.0014567 3900900.0 950.37 1055.21 1102.93 1071.92 1004.27 991.24 1129.22 863.4300000000001 1707.68 1109.54 1022.0899999999999 False True 1046.8508627745834 1144.1362499598174 1177.7814622568765 1138.1300638930488 933.7335397434173 983.1676700845746 1172.193085032894 846.2082113022691 1635.9121482171658 1039.4834550447185 896.3794095623372 1.1678658072765358 1.2763972908731238 1.3139318570826337 1.2696967955218292 1.0416722314040194 1.0968208992714508 1.307697468871161 0.9440290598770397 1.8250220060453086 1.1596467343580024 1.0 9.80796569932865 FFETSAK ddPTM_A549_MK2206_60min_R1 1 FFETSAK 7 0 P51153;A0A087WWB9;P61026 P51153;P61026 RAB13;RAB10 Ras-related protein Rab-13;Ras-related protein Rab-10 0 79.116 0.045612 1848500.0 1368.4 1970.1 1992.2 1891.2 2577.1 1909.1 1994.5 1702.9 2788.1 2560.3 2407.6 False True 1599.3524658320673 2070.3696750225386 2274.7239164868915 2354.544084899194 2198.012003863728 2111.1196948419833 2356.8748327738276 1944.2912899125292 2156.5998016808107 1981.9264517944239 1809.726473620357 0.8837536993270388 1.1440235335015931 1.2569434937514659 1.3010496996205894 1.214554815826176 1.166540759399231 1.3023376002556346 1.0743564390827391 1.1916716880239553 1.0951524888894293 1.0 10.821555946074712 -10.71620353260129 0.6945201879670287 0.9829547509541408 1.1812397263044232 0.12260554173881744 0.11498325836737583 1.0056245942028454 0.7410098217078622 0.11802123321005561 0.02202947983692096 1.9221906809463248e-11 10.71620353260129 0.19828497535028244 FFETSAK ddPTM_A549_PD325901_60min_R1 2 FFETSAK 7 0 P51153;A0A087WWB9;P61026 P51153;P61026 RAB13;RAB10 Ras-related protein Rab-13;Ras-related protein Rab-10 0 ; 87.323 0.035801 5902900.0 5908.0 6404.7 6736.200000000001 6295.7 8345.2 8004.5 6977.700000000001 7209.299999999999 8401.9 7527.1 7596.700000000001 False True 6507.775810760273 6944.446546296603 7193.359040061257 6684.571090427893 7759.061941377086 7939.31400588352 7243.24019184395 7065.504855913556 8048.797361394286 7051.8376214170785 6662.354059448982 0.9767982536939063 1.0423412632127436 1.0797023058027317 1.0033347118421905 1.164612668756726 1.1916679802724488 1.0871893218540551 1.0605117639902069 1.2081011140467626 1.0584603517754667 1.0 12.701816310280204 -6.747312342373438 24.997580913623235 1.1076372013021694 1.030612364664555 0.2944894154681338 0.06269033456495958 346.81654148366226 613683.1671667073 0.011846603627472484 0.02456322575142403 1.7893185224263642e-07 6.747312342373438 -0.07702483663761428 FFMT(ph)PPR ddPTM_A549_MK2206_60min_R1 4 FFMTPPR 7 0 H0Y322;Q5TKA1;Q5TKA1-2;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 FFMT(1)PPR;FFMT(1)PPR;FFMT(1)PPR;FFMT(1)PPR 85.212 0.014525 17361700.0 4284.03 5869.07 5666.639999999999 4925.49 7738.599999999999 5234.34 5417.05 5502.71 8269.1 7581.8 7866.0 True False 5007.069529522469 6167.780594175182 6470.254760627085 6132.23527111365 6600.262191261434 5788.23438452631 6401.257865569044 6282.735993842608 6396.162053039275 5869.06611421121 5912.6551094441475 0.8468394379243924 1.0431490557133172 1.0943061350377592 1.037137319462245 1.1162941299787617 0.978956877643835 1.0826367760474416 1.0625913193900551 1.0817749276163313 0.9926278474854193 1.0 12.529590410503657 -5.262386959764366 6.532818854094723 1.0483968152569514 0.842959080718398 0.6545681425212921 0.04222086382231925 0.05314125353567202 13.887770608894689 0.0056883514946835245 0.04826942093182151 5.465287844846126e-06 5.262386959764366 -0.2054377345385534 FFMT(ph)PPR ddPTM_A549_PD325901_60min_R1 7 FFMTPPR 7 0 H0Y322;Q5TKA1;Q5TKA1-2;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 FFMT(1)PPR;FFMT(1)PPR;FFMT(1)PPR;FFMT(1)PPR;FFMT(1)PPR;FFMT(1)PPR;FFMT(1)PPR 86.794 0.013768 42319300.0 10642.94 10549.67 11179.49 10350.210000000001 13059.579999999998 13637.309999999998 11153.53 11680.44 12404.109999999997 12711.929999999998 12273.279999999999 True False 11723.403433881678 11438.727714970084 11938.1974191346 10989.518964667584 12142.320153905164 13526.252268795715 11577.983687595797 11447.464461072082 11882.808393154473 11909.296570368455 10763.74436673213 1.0891566200806106 1.062708972383639 1.1091119421260498 1.0209754700820715 1.1280758572670906 1.2566493413390383 1.0756464751597283 1.0635206551776861 1.103966053846566 1.1064269239965343 1.0 13.393892412798795 -10.635456362058054 0.6710316344818273 0.9913839689752255 1.1029916870494347 0.0 0.06444106269524842 0.9321743938013485 0.6579139083219063 0.05930521883259949 0.01191217433888489 2.3149607817615062e-11 10.635456362058054 0.11160771807420922 FFPASADR ddPTM_A549_MK2206_60min_R1 2 FFPASADR 8 0 H7BZ94;P07237;H0Y3Z3;I3L0S0 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 85.265 0.004615 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FFPASADR ddPTM_A549_PD325901_60min_R1 2 FFPASADR 8 0 H7BZ94;P07237;H0Y3Z3;I3L0S0 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 105.39 0.0055058 6337500.0 5887.4 5602.4 4622.4 5175.299999999999 6816.2 6700.6 5916.3 6240.799999999999 6946.6 6552.5 5582.7 False True 6485.084513925189 6074.533909624508 4936.10386074926 5494.966527040918 6337.4536266134455 6646.032535176851 6141.448034023585 6116.322348187113 6654.65855945222 6138.774031743357 4896.063291651085 1.3245507926712776 1.2406975865657184 1.0081781150922728 1.122323425926928 1.2943978149588595 1.3574237380692906 1.2543645104621437 1.2492326965251552 1.3591855666571846 1.253818356925937 1.0 12.257406492602978 -10.963482324592608 1.2309796480923416 1.000094231874313 1.2512851952912727 0.0 0.12228412126857584 0.36737348402891 0.9904594272756688 0.07731039616772493 0.017948193780446507 1.0877214060445955e-11 10.963482324592608 0.2511909634169598 FFPNDDPEAVS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 FFPNDDPEAVSSPR 14 0 Q96S38-2;Q96S38;F5H7T0;F6RJM5;A0A087X1U5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 FFPNDDPEAVS(0.828)S(0.172)PR;FFPNDDPEAVS(0.66)S(0.34)PR 140.31 2.3989e-10 7829400.0 3339.1 4014.6 2939.2 3378.2 5052.6 3887.5 3416.0 3348.6 5303.1 5127.3 5348.299999999999 True False 3902.658446842923 4218.9259922569845 3356.022756419169 4205.85915165316 4309.369233138746 4298.872669686347 4036.6429825797927 3823.2743046574055 4101.956317310538 3969.0393689354983 4020.1695044292037 0.9707696261421779 1.0494398277507457 0.8347963320257233 1.0461895069397877 1.0719371977701233 1.069326222426712 1.0040977073559807 0.9510231597063582 1.020344120513134 0.9872815970974923 1.0 11.973040616425482 FFPNDDPEAVS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 FFPNDDPEAVSSPR 14 0 Q96S38-2;Q96S38;F5H7T0;F6RJM5;A0A087X1U5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 FFPNDDPEAVS(0.652)S(0.348)PR 127.36 2.8099e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FFQGS(ph)QEFLASASASAER ddPTM_A549_MK2206_60min_R1 1 FFQGSQEFLASASASAER 18 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FFQGS(1)QEFLASASASAER 126.19 4.5104000000000007e-11 1610000.0 909.07 980.38 801.23 626.75 901.45 879.68 680.45 720.49 1364.4 1108.3 1068.1 True False 1062.498791372374 1030.2771544584512 914.8564620052164 780.3037781358765 768.8478991435938 972.7671537156754 804.0789571125352 822.6216639080859 1055.3655784990844 857.9342602522203 802.8612919396501 1.323390231960816 1.283256727907983 1.1394950425309391 0.9719035977568724 0.9576347830720765 1.2116254245681044 1.0015166569681586 1.0246124357554918 1.3145054931586049 1.068595869380523 1.0 9.649006948729872 -5.754462993853599 3.994802045733684 1.1117925628217362 1.31195270620462 0.3655178853325941 0.10822247365779844 0.23328677238372564 8.202058532109625 0.019156223343352947 0.07603836192355398 1.7600986350663959e-06 5.754462993853599 0.20016014338288368 FFQGS(ph)QEFLASASASAER ddPTM_A549_PD325901_60min_R1 2 FFQGSQEFLASASASAER 18 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FFQGS(1)QEFLASASASAER;FFQGS(0.999)QEFLAS(0.001)ASASAER 186.05 8.9421e-40 11794000.0 6392.700000000001 6148.9 6770.0 5943.200000000001 7612.5 7160.9 6544.2 7725.700000000001 7793.400000000001 7471.9 8547.3 True False 7041.682197942994 6667.089382566429 7229.4529113171675 6310.297966013479 7077.824261699312 7102.584004588827 6793.243112123646 7571.604852805601 7465.870500278543 7000.122958837567 7496.036285798866 0.939387421494125 0.8894153027510199 0.964436755063908 0.8418179589082632 0.9442089114627352 0.9475119561580261 0.9062446942784079 1.0100811367668936 0.9959757684768054 0.9338432595502774 1.0 12.871912221279167 -8.262015106559364 24.99795150924214 0.9989451819407926 0.9187099943913511 0.4023362790653263 0.037290492501646795 24.86841185407045 1079779.309211321 0.004703738629600627 0.005857775623102619 5.469969357459359e-09 8.262015106559364 -0.08023518754944148 FFS(ph)PKEK ddPTM_A549_PD325901_60min_R1 1 FFSPKEK 7 1 P23511-2;P23511 P23511-2 NFYA Nuclear transcription factor Y subunit alpha 1 FFS(1)PKEK 54.416000000000004 0.011855 5065600.0 2401.5 2532.6 2593.7 2847.7 3715.9 2878.2 3519.5 3481.3 3040.9 2592.5 2829.5 True False 2645.2985121091388 2746.031090160472 2769.724079185133 3023.5959614040553 3454.908003159075 2854.7608934641667 3653.4364984443 3411.862740472984 2913.1015480146025 2428.809107561181 2481.489437678318 1.0660124004332174 1.1066059957642451 1.1161538861017628 1.2184601374861914 1.3922718955400784 1.1504223431775238 1.4722756595177997 1.374925352761172 1.173932680825795 0.9787706813024258 1.0 11.276990598559042 -9.894394583120139 1.0651399608497423 1.0263812312657392 1.2341700097146113 0.3422072319375682 0.12606865243805376 0.4156278354535207 0.958464652490742 0.043602677921733966 0.025609743544611437 1.2752796127022867e-10 9.894394583120139 0.2077887784488721 FFT(ph)PPASK ddPTM_A549_MK2206_60min_R1 2 FFTPPASK 8 0 Q69YN4 Q69YN4 KIAA1429 Protein virilizer homolog 1 FFT(0.999)PPAS(0.001)K;FFT(0.957)PPAS(0.043)K 75.294 0.0051567 6507000.0 3339.6 4079.3 4174.1 3688.5 4895.4 3998.1 4214.799999999999 3548.1 5173.1 4696.9 5526.6 True False 3903.2428346190954 4286.9189459009385 4766.050145471307 4592.182665583055 4175.293144897166 4421.176288276011 4980.574602745113 4051.054040600535 4001.4011097431962 3635.86702786128 4154.192693599545 0.9395911847403965 1.031949950830612 1.1472867286138324 1.1054332343943336 1.0050793145272559 1.0642684666717106 1.198927197194967 0.975172395551627 0.9632199093480285 0.8752283045182615 1.0 12.020352422282505 FFT(ph)PPASK ddPTM_A549_PD325901_60min_R1 2 FFTPPASK 8 0 Q69YN4 Q69YN4 KIAA1429 Protein virilizer homolog 1 FFT(0.98)PPAS(0.02)K;FFT(0.961)PPAS(0.039)K 60.398 0.011999 12336200.0 5191.200000000001 4641.700000000001 4778.5 5147.3 6246.2 5873.9 5304.700000000001 6319.5 6137.9 5409.3 6051.9 True False 5718.2068024405435 5032.872349047569 5102.797745454813 5465.2370306335315 5807.48846022019 5826.064905885335 5506.573261343224 6193.452614948159 5879.945408122213 5067.755874843084 5307.554666154947 1.077371249495409 0.9482469170107726 0.9614216087107266 1.029709041997078 1.0941928676219213 1.0976928684384182 1.0374972294599945 1.1669126376488177 1.1078445306681945 0.9548193459332591 1.0 12.373831610177477 -6.518576938016818 6.1276014242346495 1.0659443668728368 0.9913621757383326 0.20057892359316765 0.06136586639046082 0.17327674300932702 27.30131127088766 0.008545654991731834 0.018873465701681014 3.0298634907421145e-07 6.518576938016818 -0.07458219113450415 FFT(ph)TPSK ddPTM_A549_PD325901_60min_R1 1 FFTTPSK 7 0 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 FFT(0.726)T(0.274)PSK 91.069 0.013193 310490000.0 8160.3 8548.7 9232.7 9111.0 9639.7 9511.2 9746.1 10327.0 9698.3 10370.0 10097.0 True False 8988.72764870465 9269.128950665263 9859.286542735315 9673.76577741769 8962.640727159644 9433.743940628307 10116.993168770556 10121.019883625226 9290.714177746724 9715.236430244724 8855.133010156553 1.0150866890869812 1.0467520860538029 1.1133979050825134 1.0924472581408085 1.0121407229998447 1.06534186779669 1.1425004183637546 1.1429551506472846 1.049189680955732 1.097130491332164 1.0 13.112298262068645 -9.567751328221025 1.3930454096706053 1.0118301316107545 1.0779177443548384 0.0 0.04992261808418788 0.349292629493788 1.3824031928727112 0.01132732428785 0.00865776671800653 2.705507061375284e-10 9.567751328221025 0.06608761274408392 FFTFDSPAELPS(ph)RTPR ddPTM_A549_MK2206_60min_R1 1 FFTFDSPAELPSRTPR 16 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 FFTFDSPAELPS(0.589)RT(0.411)PR 69.979 0.00042778 13144000.0 690.36 1026.2 1140.2 754.77 1112.5 1009.6 938.89 1073.5 1821.1 1346.8 1708.3 True False 806.8758903184934 1078.4291967454076 1301.897505058907 939.6886838829133 948.8527237198383 1116.4352018817583 1109.4741598109904 1225.6719124558697 1408.6237576991239 1042.556944606777 1284.0819633185145 0.628367902803685 0.8398445173689469 1.0138741468608055 0.7317980555185363 0.7389347026319666 0.8694423204859146 0.8640212942044005 0.9545122098657216 1.0969889757338778 0.8119084095788148 1.0 10.326521577697982 -8.280479509745607 1.8779041052828123 1.04559349062048 0.8093908425698454 0.22833314512833125 0.1170233410089546 0.18943405661493484 1.3024562879523938 0.016735147141901732 0.021415216652999926 5.2422833380838214e-09 8.280479509745607 -0.23620264805063462 FFTFDSPAELPSRT(ph)PR ddPTM_A549_MK2206_60min_R1 1 FFTFDSPAELPSRTPR 16 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 FFTFDSPAELPS(0.037)RT(0.963)PR 149.36 4.7852e-15 12562000.0 1393.9 1662.7 1741.9 1496.1 2441.7 1660.4 1207.5 1549.8 2395.2 2284.1 2512.6 True False 1629.1562424169233 1747.324328034096 1988.927612754 1862.6445671624808 2082.529164500432 1836.102425915682 1426.8871198668323 1769.488896063444 1852.6910243484378 1768.1202236236563 1888.6520757677804 0.862602627196242 0.9251700461154385 1.0530937054382847 0.98622959255493 1.1026536815436672 0.972176108809911 0.7555055471435997 0.9369057005081818 0.9809594091570711 0.9361810183619315 1.0 10.883141240069873 -8.944617358638377 4.558691638176588 0.9919410460585042 0.9526863214093503 0.0002154882474522113 0.08804837633843038 0.6365174389475641 25.583250701694073 0.01626543285820939 0.016938798600933145 1.13601127384598e-09 8.944617358638377 -0.039254724649153916 FFTFDSPAELPSRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 FFTFDSPAELPSRTPR 16 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 FFTFDSPAELPS(0.205)RT(0.795)PR;FFTFDSPAELPS(0.204)RT(0.796)PR 126.22 5.5299e-09 45016000.0 3227.7 3644.3 3387.6000000000004 3719.3 4095.9 4023.6000000000004 3717.9 3892.0 4119.2 4340.3 4523.6 True False 3555.3737278928465 3951.4179506719615 3617.5029072936554 3949.032713856836 3808.2181140879075 3990.8331356203275 3859.3867190129426 3814.3710067850675 3946.0843489038616 4066.2527172797672 3967.22587746303 0.8961863623874233 0.9960153701152057 0.911846972929856 0.9954141346703889 0.9599196596598112 1.0059505707228331 0.9728174896562611 0.9614705904329021 0.9946709541598655 1.024961230561458 1.0 11.953914825583313 -2.000000000000161 0.26586979502082714 0.9987299040051969 0.46880211982753534 0.43992065435203964 0.028485577266299404 29.600188128452835 0.36486105887421294 0.01000743279248632 7.280444886781977 0.009999999999996288 2.000000000000161 -0.5299277841776615 FFTT(ph)PSK ddPTM_A549_MK2206_60min_R1 2 FFTTPSK 7 0 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 FFT(0.233)T(0.767)PSK;FFT(0.235)T(0.765)PSK 96.25299999999999 0.012496 320780000.0 4996.5 5616.9 6450.5 5968.6 6825.0 5571.2 6220.6 6113.1 7704.6 7763.2 8322.0 True False 5839.787047303361 5902.776218280341 7365.27789544157 7430.9072679406345 5821.051541022833 6160.740686136743 7350.802499249371 6979.650645583582 5959.520401718008 6009.48772822344 6255.417724484386 0.9335566871011345 0.9436262258196175 1.1774238300046806 1.1879154351043983 0.9305616023432941 0.9848647936048992 1.17510977252207 1.1157769077937785 0.9526974319223792 0.9606852800096228 1.0 12.610890512605504 -8.776364317827213 24.99659063609297 0.9776626728199517 1.0582002523228295 0.1351593974740859 0.09523492654586257 376.44823955756993 630480.7312922347 0.01716058774586307 0.01830382660971091 1.673538401179682e-09 8.776364317827213 0.08053757950287788 FFTT(ph)PSK ddPTM_A549_PD325901_60min_R1 1 FFTTPSK 7 0 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 FFT(0.346)T(0.654)PSK 95.90899999999999 0.012542 285540000.0 6737.2 6823.0 7518.4 7428.8 9388.7 7989.9 7978.7 8766.7 9369.9 8310.9 9255.4 True False 7421.1555843355 7397.9981553205835 8028.643835811966 7887.660103971086 8729.270101256656 7924.832903442898 8282.333794612163 8591.841291156894 8976.115687704963 7786.148355652937 8117.0444748146 0.9142681929810426 0.9114152544408178 0.9891092577751764 0.9717404072929201 1.075424697787681 0.9763200051486607 1.0203632393921727 1.05849380495764 1.1058354694933448 0.9592344085105903 1.0 12.986738802995 -5.948367797937051 0.7050238956992927 1.0482721064361726 0.8739937783934367 0.4197642874910489 0.045376369032836705 0.8400614491400682 0.4827889050862677 0.007763020855620248 0.09640735203100381 1.1262432524854895e-06 5.948367797937051 -0.1742783280427359 FFTT(ph)PSKS(ph)VRK ddPTM_A549_MK2206_60min_R1 1 FFTTPSKSVRK 11 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 2 FFT(0.466)T(0.544)PS(0.162)KS(0.829)VRK 40.477 0.049187 5410000.0 1709.3 1175.3 1785.3 1313.1 3035.8 1870.2 1667.5 1504.0 2878.0 2334.2 2185.6 True False 1997.788051627267 1235.1177498878171 2038.4823853549078 1634.8095589472996 2589.237841499941 2068.1033226617137 1970.4631655303867 1717.196605806827 2226.1375952216117 1806.902598827695 1642.8552005086606 1.2160463387209732 0.7518116931458111 1.2408168320152337 0.9951026471725141 1.5760596799390851 1.2588469890842406 1.1994137796929956 1.0452513436821145 1.3550418774170452 1.0998550561657792 1.0 10.681989612963473 -5.809198026023216 24.999112045241116 1.1901984248307065 0.9839246066845607 0.15739145292884693 0.18939825566002844 146.90936314373934 76898.91725878576 0.027017802398755626 0.08400209087005028 1.5516793266609157e-06 5.809198026023216 -0.20627381814614576 FFTT(ph)PSKS(ph)VRK ddPTM_A549_PD325901_60min_R1 1 FFTTPSKSVRK 11 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 2 FFT(0.1)T(0.9)PS(0.144)KS(0.856)VRK 76.72800000000001 0.00059492 12768000.0 3171.6 3542.7 4041.0 4295.5 4139.4 4366.8 4052.6 4896.9 4804.8 4436.7 4223.3 True False 3493.5784971914813 3841.255762106729 4315.2465605070465 4560.823279211687 3848.6628241547596 4331.238228607925 4206.823910667814 4799.227487956264 4602.870965142085 4156.566004828041 3703.8608737044874 0.9432261675901752 1.0370950457069472 1.1650671306644058 1.2313700310913924 1.0390948675956735 1.1693846978317934 1.1357942574285407 1.2957364360060923 1.2427224245435642 1.1222251986670253 1.0 11.854814193037164 -5.530130929103146 3.2668273830146126 1.139014131313515 0.9515550028277636 0.37974415166476816 0.08287064951851884 0.2692667438380477 5.593324370439816 0.014780409818976272 0.09135506689430702 2.9503196437813343e-06 5.530130929103146 -0.1874591284857513 FFTTGS(ph)DSESESSLSGEELVTKPVGGNYGK ddPTM_A549_PD325901_60min_R1 1 FFTTGSDSESESSLSGEELVTKPVGGNYGK 30 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 FFT(0.008)T(0.048)GS(0.307)DS(0.273)ES(0.307)ES(0.043)S(0.007)LS(0.007)GEELVTKPVGGNYGK 100.86 9.0205e-15 3966700.0 937.49 910.31 956.72 826.51 1750.5 1343.2 1365.9 1077.0 1192.6 1258.5 1119.8 True False 1032.6632946563384 987.0250184332231 1021.648772424721 877.5616455595984 1627.5509188971619 1332.261424536541 1417.8800719491599 1055.5183901098446 1142.4791693782151 1179.0380952230469 982.0716989970598 1.051515175226967 1.005043745218625 1.0402995763629879 0.893582053587134 1.6572628256768802 1.3565826465594235 1.443764313132299 1.074787503995678 1.1633358038369006 1.200562134543882 1.0 9.939684546301905 -4.314398368824824 14.246101889011326 1.1320597643219086 1.1416681513453537 0.0 0.22109463525758047 0.0 0.0 0.029984335190890225 0.0 4.8484355973847715e-05 4.314398368824824 0.00960838702344513 FFVS(ph)TPSQPSCK ddPTM_A549_MK2206_60min_R1 2 FFVSTPSQPSCK 12 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 FFVS(0.769)T(0.174)PS(0.057)QPSCK;FFVS(0.802)T(0.181)PS(0.017)QPSCK 151.55 2.2518e-12 8403000.0 5028.299999999999 6058.5 5195.1 5382.1 7206.5 5210.9 5786.2 5037.1 7853.1 6963.900000000001 6630.6 True False 5876.954109868006 6366.8517720542295 5931.843298133246 6700.714741611649 6146.433396392822 5762.313979284524 6837.477642214052 5751.124350471786 6074.38538882378 5390.750153361399 4984.039024749598 1.1791549144548017 1.2774482182900053 1.190167907730471 1.3444346459442695 1.23322336881213 1.1561534632193269 1.3718748204539937 1.1539083706834994 1.2187676217340537 1.0816027175132792 1.0 12.283099649290515 -10.561376388116557 0.5110891971865962 0.9609717632921264 1.2479611334003031 0.5239626567081741 0.07098900957235546 0.6154943508681657 0.23567421878157194 0.0855012746031778 0.015244932056318558 2.7455136792715707e-11 10.561376388116557 0.2869893701081767 FFVS(ph)TPSQPSCK ddPTM_A549_PD325901_60min_R1 1 FFVSTPSQPSCK 12 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 FFVS(0.91)T(0.082)PS(0.008)QPSCK 171.57 1.0436e-15 10016000.0 4573.6 4701.1 5112.0 4736.7 5146.4 5360.5 4980.1 5790.4 5110.5 5464.2 5099.6 True False 5037.908505093631 5097.278195511884 5458.931060953235 5029.275201173791 4784.9346181161645 5316.845865268113 5169.620430715284 5674.905929519075 4895.723457242472 5119.189479473796 4472.381529027868 1.126448732603698 1.1397234700188572 1.2205870687735818 1.1245183731601207 1.0698851578425677 1.1888175976846502 1.1558987973548334 1.2688778657827502 1.0946569351176583 1.1446227130328304 1.0 12.126827551232681 -9.532370201526415 1.2062925713437698 1.0210732564858935 1.1580805726510712 0.12238463809824185 0.064875494978768 0.2244879506864273 0.674115408063303 0.014260677509216333 0.010708560104914543 2.935146606104388e-10 9.532370201526415 0.1370073161651777 FFVST(ph)PSQPSCK ddPTM_A549_PD325901_60min_R1 1 FFVSTPSQPSCK 12 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 FFVS(0.288)T(0.705)PS(0.007)QPSCK 164.04 2.9911e-14 8604200.0 3848.2 3968.1 3996.5 4299.2 4761.6 4210.1 3906.0 4491.0 3996.3 4478.5 4873.4 True False 4238.866431104886 4302.505713048158 4267.726522906806 4564.75181980838 4427.161642628234 4175.814341454206 4054.644967445211 4401.4234818786545 3828.3494085076004 4195.72674569441 4274.002695027923 0.9917790730539519 1.006668928415369 0.9985315469902678 1.068027361124197 1.0358350142779473 0.9770266046654714 0.9486762776640506 1.0298129870154185 0.8957292921132771 0.9816855638803003 1.0 12.061372102370198 -7.438083603588114 4.1463485949585674 0.9566919515355639 1.0206042630753196 0.25035382797702344 0.037727503609024535 0.22767120765902746 7.158295996474991 0.0070241183850930245 0.011306244384603927 3.6468373695284635e-08 7.438083603588114 0.06391231153975574 FGDES(ph)PLLTMR ddPTM_A549_MK2206_60min_R1 2 FGDESPLLTMR 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 FGDES(0.902)PLLT(0.098)MR;FGDES(1)PLLTMR 67.153 0.0047726999999999995 3327000.0 961.51 893.54 690.76 794.51 1726.7 1133.0900000000001 967.33 1104.3899999999999 1360.31 1591.56 1274.98 True False 1123.7893813374676 939.017369382081 788.7201548802758 989.1649856669087 1472.704717345659 1252.9928317157307 1143.0813396776673 1260.9406645525269 1052.2019569686975 1232.025490613575 958.3672783421171 1.1726082544069272 0.9798095058154432 0.8229831847396601 1.0321355998068598 1.5366809266415022 1.3074244707971328 1.192738280521313 1.3157175678345703 1.0979109791695991 1.2855462811134997 1.0 9.904434840619023 -6.53445011586201 24.990949483089093 1.1334217994326943 0.9800941531575214 0.1590577037012465 0.17414594581341394 373.7726178322701 807243.731311299 0.02781650126542477 0.057939413249953504 2.921123268379249e-07 6.53445011586201 -0.15332764627517292 FGDES(ph)PLLTMR ddPTM_A549_PD325901_60min_R1 2 FGDESPLLTMR 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 FGDES(0.999)PLLT(0.001)MR;FGDES(1)PLLTMR 73.848 0.0014609999999999998 4151500.0 1336.2800000000002 1218.8400000000001 1351.0700000000002 1349.05 1453.94 1439.54 1448.6399999999999 1671.69 1409.81 1615.78 1459.52 True False 1471.938161882657 1321.5559243193525 1442.7617348439126 1432.377754585154 1351.8202702207013 1427.8168635179659 1503.7687879262253 1638.3468315345647 1350.560588446337 1513.7593750492595 1280.0082926595724 1.1499442388957473 1.0324588769448153 1.1271503029454402 1.119037870925814 1.0561027440001343 1.1154746978640897 1.1748117543845973 1.2799501697996383 1.0551186239896717 1.1826168500080607 1.0 10.321937441559305 -8.980860394551286 19.800372933394446 1.024315692170844 1.1289029910032318 0.0 0.07739988456939845 10.249264604721407 10604.146763965195 0.01141505300330028 0.011656746143593463 1.0450561020960086e-09 8.980860394551286 0.10458729883238771 FGDFLQHS(ph)PSILQSK ddPTM_A549_MK2206_60min_R1 2 FGDFLQHSPSILQSK 15 0 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 FGDFLQHS(0.998)PS(0.002)ILQSK;FGDFLQHS(0.955)PS(0.045)ILQSK 132.79 6.327399999999999e-10 23013000.0 4923.9 5683.1 5271.9 4699.6 8119.700000000001 6774.9 5144.9 5998.6 9290.0 7889.799999999999 8015.3 True False 5754.93394220295 5972.345515517275 6019.534692966189 5851.002210973064 6925.302886101552 7491.815421185349 6079.661733335709 6848.91991994204 7185.829833081573 6107.488700295926 6024.879798973771 0.9551948145394035 0.9912804428952351 0.9991128277764989 0.9711400735280522 1.149450796890778 1.2434796495793068 1.009092618639673 1.1367728732295421 1.192692646632643 1.0137112945118383 1.0 12.556716743406461 -6.751688541874048 24.98967106161053 1.1052730886439133 0.9814698103781156 0.4087131586908461 0.07361350064347066 191.92253837034264 491859.8611241436 0.01231062502074407 0.025383826069244882 1.771378862908161e-07 6.751688541874048 -0.12380327826579762 FGDFLQHS(ph)PSILQSK ddPTM_A549_PD325901_60min_R1 2 FGDFLQHSPSILQSK 15 0 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 FGDFLQHS(1)PSILQSK;FGDFLQHS(0.999)PS(0.001)ILQSK 140.16 3.2733e-11 34613000.0 10422.0 9776.2 10564.9 11564.8 12305.599999999999 13139.8 10779.1 12393.9 14090.0 13466.599999999999 12895.8 True False 11480.033767729114 10600.07468357689 11281.897645904688 12279.131430433561 11441.297108015375 13032.79382528681 11189.30454904984 12146.693941673537 13497.846299294873 12616.316577775664 11309.698353211543 1.0150610042105324 0.9372552965187488 0.9975418701331711 1.0857169702449876 1.011635920843677 1.1523555640708993 0.9893548173963884 1.0740068888065717 1.1934753587359805 1.1155307757782142 1.0 13.465272830527999 -6.1938089524112385 3.4836334449361335 1.0832993196526668 0.9739582355643478 0.3154865462601685 0.06186217706142557 0.2601334273264035 6.210281116903411 0.011016706870759093 0.03137519082654161 6.400163188752538e-07 6.1938089524112385 -0.109341084088319 FGESEEVEMEVES(ph)DEEDDKQEK ddPTM_A549_MK2206_60min_R1 6 FGESEEVEMEVESDEEDDKQEK 22 1 H7C1L2;Q15459-2;Q15459 H7C1L2 SF3A1 Splicing factor 3A subunit 1 1 FGESEEVEMEVES(1)DEEDDKQEK;FGES(0.001)EEVEMEVES(0.999)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK 402.32 0.0 466480000.0 46565.5 50435.5 46142.9 41364.6 72172.2 60125.3 56360.0 61772.0 79841.5 64678.0 64965.399999999994 True False 54424.617982828924 53002.45152256192 52686.6570655873 51498.92885692749 61555.76498593526 66487.71933805608 66599.88246434352 70528.37016881608 61757.5277306762 50067.19487917814 48832.69822617375 1.1145117914794636 1.0853885500464364 1.078921685252032 1.0545992895662821 1.260544004773877 1.3615409705626187 1.3638378562634241 1.4442857497277042 1.2646757188111897 1.0252801237254328 1.0 15.575559875115918 -6.750228431704056 24.96177188938047 1.1966241024153907 1.083183856395907 0.2047956259799849 0.13316170737682784 434.3523698936506 967101.6960224095 0.024114427496151503 0.049833154782778624 1.7773443104687258e-07 6.750228431704056 -0.11344024601948366 FGESEEVEMEVES(ph)DEEDDKQEK ddPTM_A549_PD325901_60min_R1 4 FGESEEVEMEVESDEEDDKQEK 22 1 H7C1L2;Q15459-2;Q15459 H7C1L2 SF3A1 Splicing factor 3A subunit 1 1 FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK 253.67 1.4259e-110 731869700.0 44307.0 42671.5 42383.200000000004 43068.4 51223.0 40419.899999999994 40202.9 41741.0 45358.9 43699.5 50389.8 True False 48805.01402291054 46267.577060642296 45259.57882288594 45728.63725256678 47625.273189756816 40090.73373557511 41732.843359371036 40908.44300981897 43452.623172823725 40940.3061121967 44192.174047260254 1.1043813769088888 1.0469631344944141 1.0241537059137251 1.0347677668825117 1.0776856811530728 0.9071908001788063 0.9443491808015794 0.9256942861890076 0.9832651167230281 0.9264152985190109 1.0 15.43150328620557 -7.23733647277591 24.996056766272453 0.9770941290711336 1.0538744255060968 0.6313525689918655 0.038311924755341314 534.7835674053957 554600.4952268533 0.005762873551324194 0.0099779621512814 5.7897995372935546e-08 7.23733647277591 0.0767802964349632 FGEYNSNMS(ph)PEEK ddPTM_A549_MK2206_60min_R1 4 FGEYNSNMSPEEK 13 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 FGEYNS(0.01)NMS(0.99)PEEK;FGEYNS(0.035)NMS(0.965)PEEK;FGEYNSNMS(1)PEEK;FGEY(0.006)NS(0.034)NMS(0.96)PEEK 203.53 8.997e-31 199049000.0 18049.999999999996 21661.899999999998 21034.8 17972.500000000004 27411.3 20589.1 19362.100000000002 22351.2 29493.1 26716.3 29735.8 True False 21096.39871986905 22764.39818454429 24017.85093791711 22375.763306816192 23379.13408152953 22767.824896061527 22879.942942918107 25519.551047679208 22812.95994080281 20681.06927472381 22351.58019367012 0.9438437254580982 1.0184692977989573 1.074548230138953 1.0010819419896282 1.0459723151095335 1.018622607385463 1.0236387201562427 1.1417336414946735 1.020641929704073 0.9252620662847187 1.0 14.448089209033395 -5.271085184638467 5.118742652187454 1.0259177796753556 0.940577679066417 0.18571711302542737 0.05018064025527795 0.16697122011510498 14.079609248477425 0.005634848481384696 0.04932956866405887 5.356915740490813e-06 5.271085184638467 -0.0853401006089386 FGEYNSNMS(ph)PEEK ddPTM_A549_PD325901_60min_R1 2 FGEYNSNMSPEEK 13 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 FGEYNS(0.004)NMS(0.996)PEEK;FGEYNS(0.001)NMS(0.999)PEEK 127.3 1.9915e-08 208187000.0 21220.6 22162.2 25824.9 25549.4 25283.8 25882.4 26491.1 28448.8 26520.7 25553.1 28880.0 True False 23374.89969021994 24029.88637224766 27577.533011739273 27127.528411102598 23507.953112374766 25671.622315682354 27499.23330698616 27881.366366348135 25406.12720721854 23939.67290508066 25327.943085403735 0.9228897747993868 0.9487500146072212 1.088818500529242 1.071051380668016 0.9281430013131302 1.0135691725585358 1.0857270649361859 1.1008144748404742 1.0030868721376691 0.9451881988347044 1.0 14.628442298250809 -7.498133432113327 24.83276512894014 1.017723896432681 0.9964645099955832 0.0551366183085471 0.06307894453504859 2780.90224509145 2790731.2922509494 0.009522882334896645 0.01518155680479143 3.1758981616144416e-08 7.498133432113327 -0.021259386437097683 FGFGAKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 FGFGAKSPK 9 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGFGAKS(1)PK;FGFGAKS(1)PK 51.092 0.0074639 96916000.0 2535.8 3519.7 2890.6 2197.5 3356.7 2100.5 2051.8 2168.2 3302.0 3467.5 3298.0 True False 2963.781045642325 3698.8376961457943 3300.5305456264477 2735.887598649523 2862.933876593602 2322.773515800946 2424.585501070615 2475.548989834018 2554.10227221048 2684.18934171666 2479.0155798305113 1.1955475672504474 1.4920590762881294 1.3313875767784011 1.103618557668191 1.1548672383855445 0.9369741500211759 0.9780436721726381 0.9986016263775436 1.0302889150801957 1.082764208323441 1.0 11.275551622998213 -6.481856449925415 1.614367548095572 1.0087481354077703 1.3627981388540549 0.7327040775832941 0.08285367584519766 0.12262400689997198 0.6209432696517527 0.01084817396988106 0.033189202072065466 3.297186781471965e-07 6.481856449925415 0.35405000344628457 FGFGAKS(ph)PK ddPTM_A549_PD325901_60min_R1 4 FGFGAKSPK 9 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGFGAKS(1)PK;FGFGAKS(1)PK;FGFGAKS(1)PK;FGFGAKS(1)PK 72.434 0.002203 378793800.0 18170.899999999998 18962.6 20239.9 20569.1 23921.8 23266.4 22710.1 24535.699999999997 22173.5 20295.2 22292.5 True False 20015.596391290434 20560.644851250494 21613.50132640598 21839.606591184533 22241.615293729843 23076.926152350334 23574.345282943566 24046.31621561571 21241.624905423338 19013.757608399497 19550.66382380064 1.0237809095220487 1.0516596795153481 1.1055124020952207 1.1170774960897938 1.1376399028790667 1.1803653502678964 1.2058079201507503 1.2299488361281183 1.0864912361473962 0.9725376989630642 1.0 14.254929973222549 -9.675577017243134 1.2381861891913806 1.018004832821721 1.1300098438157253 0.4244352905935975 0.06088387784078178 0.32906982139637925 1.0293091465434625 0.017978427915499383 0.01266789129237846 2.1106828567451074e-10 9.675577017243134 0.11200501099400428 FGFPEGSVELYAEK ddPTM_A549_MK2206_60min_R1 2 FGFPEGSVELYAEK 14 0 P23396;F2Z2S8;H0YCJ7;E9PPU1;H0YF32 P23396 RPS3 40S ribosomal protein S3 0 ; 135.66 1.2990000000000001e-08 4001000.0 3391.7 3636.8999999999996 4185.9 3475.2 4459.299999999999 3371.4 3716.1000000000004 3544.9 5305.4 5204.6 4327.3 False True 3964.1360408963924 3822.002675544117 4779.523562906573 4326.624156007659 3803.342877198988 3728.159310245801 4391.267268022472 4047.4004308009457 4103.73537098288 4028.877245248314 3252.711982595685 1.218717200326168 1.1750203202726035 1.469396487755575 1.330159011667238 1.1692836308746573 1.1461695133765597 1.3500326163271956 1.2443156518183618 1.2616350273066823 1.2386209620789246 1.0 11.667427366593268 -10.69066565897869 0.5870671999813809 0.9604573040809073 1.269773437456932 0.04908916968015831 0.11360860691992751 0.7230728358733849 0.3580595250464683 0.11977555415300283 0.020030439865580507 2.0386108956012748e-11 10.69066565897869 0.3093161333760247 FGFPEGSVELYAEK ddPTM_A549_PD325901_60min_R1 2 FGFPEGSVELYAEK 14 0 P23396;F2Z2S8;H0YCJ7;E9PPU1;H0YF32 P23396 RPS3 40S ribosomal protein S3 0 ; 143.97 1.4147e-12 4636900.0 3773.2 3746.9 3876.5 4265.3 5255.200000000001 4967.3 4597.6 5357.2 4954.6 4714.700000000001 5442.2 False True 4156.252486316969 4062.6644127466952 4139.582601288184 4528.7578938008655 4886.092881455793 4926.847955703068 4772.564183903257 5250.346443357898 4746.375392085615 4417.013037384266 4772.843900948204 0.8708125747609851 0.8512041242202747 0.8673199222932451 0.9488594196221573 1.023727777999421 1.0322667277520365 0.9999413940512718 1.1000457069871552 0.9944543527062911 0.9254467837313418 1.0 12.220633437517616 -6.429917992055185 2.6320416085674156 1.0095447738758367 0.8600501260919231 0.7320028291978717 0.0390879437739942 0.08797486371929508 1.1818578948995346 0.004548001390969802 0.011808140243622731 3.7160539281956615e-07 6.429917992055185 -0.14949464778391364 FGGALDAAAK ddPTM_A549_MK2206_60min_R1 1 FGGALDAAAK 10 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 99.44200000000001 0.0013115 1826000.0 1772.1 1942.1 2085.1 2184.0 2622.5 2085.2 2023.8 1981.5 3207.2 2739.3 2766.0 False True 2071.1871563146774 2040.944594620208 2380.798533413723 2719.0800980434856 2236.7337240047427 2305.854479956264 2391.498263508485 2262.3836930892476 2480.774320845989 2120.4902274735246 2079.1258622835635 0.9961817097690436 0.9816359036477859 1.1450959158378338 1.3077996610830678 1.0758048680843564 1.1090499722915659 1.1502421796061129 1.0881417686779224 1.1931814065942519 1.0198950751084062 1.0 11.02176138071124 -5.754713962295768 24.969361694574506 1.1139451152408704 0.9889087449238568 0.2858640344464174 0.07990049267147452 176.10362349417812 653798.4906846308 0.01251703754605477 0.04633943758509253 1.7590818097943924e-06 5.754713962295768 -0.12503637031701353 FGGALDAAAK ddPTM_A549_PD325901_60min_R1 2 FGGALDAAAK 10 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 ; 133.23 2.4977000000000002e-06 5849200.0 7157.0 7403.0 7942.099999999999 7710.799999999999 9266.099999999999 8788.0 8488.099999999999 8915.400000000001 8561.9 8582.5 9144.3 False True 7883.573371295073 8026.876790830763 8481.098665727044 8187.078603502614 8615.281102309611 8716.433441652112 8811.119290366536 8737.575353004004 8202.073117809281 8040.599485301389 8019.609070493677 0.9830371158989387 1.000906243717518 1.0575451485448728 1.0208825058100528 1.0742769412548516 1.0868900672131565 1.0986968582776735 1.0895263442643257 1.0227522371367126 1.0026173862869379 1.0 12.969316196428784 -4.4161159208897605 16.280961735406148 1.0304933536855205 1.0427191309511326 0.0 0.04150870938049995 0.0 0.0 0.006111909167733593 0.0 3.8360484089936226e-05 4.4161159208897605 0.012225777265612026 FGGEHVPNS(ph)PFQVTALAGDQPSVQPPLR ddPTM_A549_MK2206_60min_R1 1 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5F3 Q60FE5 FLNA Filamin-A 1 FGGEHVPNS(0.986)PFQVT(0.014)ALAGDQPSVQPPLR 73.696 2.7811e-06 8842900.0 546.42 503.12 230.53 417.39 741.38 502.91 343.49 474.44 1011.9 413.83 676.42 True False 638.64233731362 528.7266590007308 263.22262045363055 519.650568737349 632.3239841001472 556.1276023953601 405.8976867934232 541.6933229115632 782.7062656722545 320.34551558258266 508.446245757718 1.2560665805721032 1.0398870350842884 0.5176999980821178 1.0220363963213723 1.243639793539667 1.0937785597503713 0.798309929869832 1.0653895616916167 1.5394080931914786 0.6300479514902977 1.0 8.989951446496503 -8.5391161280239 24.66502287408388 1.2572299008088554 0.9891069768282832 0.0 0.29363714319372625 269.8704660214149 409938.635293289 0.04552841012352558 0.05163160373358491 2.8899070333431185e-09 8.5391161280239 -0.26812292398057225 FGGEHVPNS(ph)PFQVTALAGDQPSVQPPLR ddPTM_A549_PD325901_60min_R1 2 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5F3 Q60FE5 FLNA Filamin-A 1 FGGEHVPNS(0.966)PFQVT(0.034)ALAGDQPSVQPPLR;FGGEHVPNS(0.981)PFQVT(0.019)ALAGDQPSVQPPLR 62.666000000000004 0.00021866 25983000.0 1617.1399999999999 1705.1999999999998 1522.44 1933.88 2078.7 1831.33 1549.95 1870.2600000000002 2338.37 1985.93 1879.92 True False 1781.3108623244518 1848.903188399921 1625.7619335754368 2053.3313754398564 1932.6992831256946 1816.4162556555257 1608.9341954151841 1832.9561971094129 2240.0964408007203 1860.5380408790666 1648.7017577947427 1.0804324395863345 1.1214297429226752 0.9860861286094645 1.2454231735558619 1.1722552450667725 1.1017251889663253 0.9758794686840447 1.1117572892996268 1.3587032525500613 1.128486721193086 1.0 10.687114730456704 -8.54972265540074 24.989973041637086 1.1728530293767963 1.0987231181891097 0.06519039122766634 0.10529246293444834 543.5393256620724 505998.0207566999 0.024252687184672574 0.027500397269861324 2.8201833523132258e-09 8.54972265540074 -0.07412991118768653 FGGPVHHQAQR ddPTM_A549_MK2206_60min_R1 2 FGGPVHHQAQR 11 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 0 ; 54.066 0.019295 8712400.0 510.1 374.87 272.17999999999995 348.6 383.19 273.35 190.31 398.95 525.27 551.6 561.3199999999999 False True 596.1924092523659 393.94928180077113 310.7792167399868 434.0070156492489 326.8232586087236 302.2757155649553 224.88686358745912 455.50238423313414 406.2971836838278 426.99317689716213 421.9287523561134 1.4130167852348012 0.9336867411876988 0.7365679987546453 1.0286263100717565 0.774593475281534 0.7164141193910166 0.5329972473590794 1.0795718037453967 0.9629521131589242 1.0120030325327871 1.0 8.720855593208235 -5.263458303292279 6.1895297648811605 0.9153647943896983 1.424588358436515 0.45434728807115365 0.1640872741278729 0.09319000902929246 18.717687598142504 0.023360758116320966 0.19936624799093128 5.451822362414032e-06 5.263458303292279 0.5092235640468168 FGGPVHHQAQR ddPTM_A549_PD325901_60min_R1 2 FGGPVHHQAQR 11 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 0 ; 61.161 0.0077977 8300300.0 370.99 247.55 514.64 180.44 396.89 501.75 290.61 294.94 394.28 541.6600000000001 487.44 False True 408.65263169159687 268.41190727680066 549.5665651817235 191.5853689910271 369.0138155961691 497.6639143546822 301.669322577894 289.0571903240459 377.709782745634 507.4594951597264 427.4879701367451 0.955939488919131 0.627881779201742 1.2855720010224565 0.4481655213121966 0.8632145028037367 1.1641588749163847 0.7056790919318637 0.6761761979678215 0.8835565188531784 1.187073159035095 1.0 8.73974001171886 -9.919827914444124 1.0880516782346015 0.9825808276557041 0.8436334014458611 0.11012866037864688 0.23466556500423508 0.9670836132134026 2.320569578052954 0.06874379809803498 0.04014231311745424 1.2027409162382002e-10 9.919827914444124 -0.13894742620984302 FGGS(ph)GSQVDSAR ddPTM_A549_MK2206_60min_R1 1 FGGSGSQVDSAR 12 0 Q13200;Q13200-2;Q13200-3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 FGGS(0.671)GS(0.286)QVDS(0.043)AR 94.633 0.00026126 14714000.0 5609.4 6053.9 5606.1 4938.1 7984.2 6384.8 5419.9 5728.1 8673.8 8393.1 8576.3 True False 6556.129583337034 6362.017651702424 6401.129278293926 6147.934721679731 6809.734756605785 7060.4352981127695 6404.625673678051 6540.075716570538 6709.198149212371 6497.092880738892 6446.56801616143 1.0169953325398777 0.98688443769661 0.992951483990615 0.9536756156557985 1.0563348962632368 1.0952238897367383 0.9934938493818368 1.014505035884937 1.040739527201533 1.0078374825877578 1.0 12.654315596546308 -6.764457977694384 24.999834371356805 1.0252924460621446 0.9879540406929095 0.2999630157299019 0.030464713225343797 91.77702945930797 760101.5847886441 0.0046626543213458055 0.00909907848175398 1.7200537654761686e-07 6.764457977694384 -0.03733840536923516 FGGS(ph)GSQVDSAR ddPTM_A549_PD325901_60min_R1 1 FGGSGSQVDSAR 12 0 Q13200;Q13200-2;Q13200-3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 FGGS(0.666)GS(0.212)QVDS(0.122)AR 91.712 0.00026904 23833000.0 5020.3 5555.2 5574.2 5680.2 7008.8 6203.1 6324.4 6193.3 7231.2 6504.8 7714.2 True False 5529.957160250472 6023.356199976095 5952.498732387622 6031.0530533298215 6516.526067047375 6152.58401023125 6565.07850284447 6069.769772950138 6927.2978111753755 6094.085817883887 6765.402304342848 0.8173877785066354 0.8903175197888205 0.8798440158638597 0.8914551983787228 0.9632133868616041 0.9094187948411853 0.9703899646337681 0.8971779503864582 1.0239299157019242 0.90077212614126 1.0 12.723960011210272 -6.615304414973736 0.3284057360379791 1.01777687086388 0.7954215933046545 0.30945269506326456 0.04780002934802814 1.151967104527247 0.16383857534035462 0.014326753748607594 0.09204444900393854 2.4249097796325137e-07 6.615304414973736 -0.22235527755922546 FGGSGS(ph)QVDSAR ddPTM_A549_MK2206_60min_R1 1 FGGSGSQVDSAR 12 0 Q13200;Q13200-2;Q13200-3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 FGGS(0.306)GS(0.693)QVDS(0.001)AR 89.035 0.00027617 14771000.0 6955.0 7422.2 7350.0 6883.5 10226.0 6942.0 6860.1 7143.6 10369.0 10252.0 10418.0 True False 8128.8339665755775 7799.958277220584 8392.340521121698 8569.957809012061 8721.76894630029 7676.597832273343 8106.491371427298 8156.227176357474 8020.4380558905095 7936.066079676775 7830.923077827244 1.0380428827850257 0.9960458300638484 1.0716923710927606 1.0943738974115769 1.1137600075520366 0.980292841083976 1.0351897587118826 1.0415409646215663 1.0242008478668199 1.0134266421473654 1.0 12.934966661311448 -8.866752234247615 0.5480945497736485 1.0035669861031822 1.0530588785694086 0.17480696913173055 0.03612241951305805 0.8925430374438011 0.6150523451541123 0.014040763693171178 0.012641028826956877 1.3590885878442817e-09 8.866752234247615 0.04949189246622643 FGLGT(ph)PEK ddPTM_A549_MK2206_60min_R1 2 FGLGTPEK 8 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 FGLGT(1)PEK;FGLGT(1)PEK 68.557 0.0079288 32754000.0 3744.6 4027.0 3721.0 3573.8999999999996 4541.1 4566.1 4121.4 4158.6 5789.3 5365.2 6104.7 True False 4376.596933319761 4231.957099292299 4248.693752257668 4449.5056604384645 3873.1102055587953 5049.281671268123 4870.205031734295 4748.094285178371 4478.032793612396 4153.197593706771 4588.734508851215 0.9537699173656132 0.9222492805215191 0.9258966157362903 0.969658552233913 0.8440475686897878 1.1003647435972943 1.0613394656718864 1.0347284803729149 0.9758753279307647 0.9050856147148334 1.0 12.16388062358838 -7.255536005391706 24.99989352080404 1.005231706400236 0.925815019035364 0.39270982216632266 0.05509431562114236 399.00057307792525 1689704.7366731449 0.0072077038842262705 0.012274436120162968 5.5521858454915085e-08 7.255536005391706 -0.07941668736487206 FGLGT(ph)PEK ddPTM_A549_PD325901_60min_R1 1 FGLGTPEK 8 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 FGLGT(1)PEK 98.04 0.0025906999999999996 25311000.0 7956.0 7568.1 8555.0 7918.2 9008.9 8156.4 8367.1 8132.7 7785.9 7877.6 7333.4 True False 8763.687263102358 8205.890347249255 9135.593745394148 8407.289230463046 8376.145943017784 8089.976982645798 8685.514569152805 7970.486918520268 7458.685699196583 7380.206991600375 6431.438290252757 1.3626325664018684 1.2759028349359722 1.4204588978548867 1.3072175850936507 1.3023752331904284 1.2578799045474258 1.3504777900638867 1.2393008466861968 1.1597228120031384 1.1475204547613456 1.0 12.65092569440435 -9.19862276307722 0.47163135792830163 0.9989219460978946 1.3477007963810734 0.7208813872103267 0.05946657395730248 0.1848443112844472 0.09883635561240459 0.023684094836764598 0.01564544126531311 6.32961415677989e-10 9.19862276307722 0.3487788502831788 FGLHGS(ph)SGK ddPTM_A549_MK2206_60min_R1 1 FGLHGSSGK 9 0 Q9NV70-2 Q9NV70-2 EXOC1 Exocyst complex component 1 1 FGLHGS(0.832)S(0.168)GK 49.35 0.030413 2396000.0 2210.0 2530.3 2750.9 2219.8 2858.3 2610.7 2638.2 2371.2 3060.6 3704.3 3826.9 True False 2582.993970687567 2659.0814622148773 3141.01898497329 2763.6510996506095 2437.8478563671138 2886.962541157594 3117.5267905860687 2707.324861495445 2367.3789867738933 2867.49605725192 2876.5751129331047 0.8979407348253851 0.9243914578345707 1.0919301119067755 0.9607435895642745 0.8474827740136284 1.0036110401490255 1.083763388124177 0.9411625823095288 0.8229852841770543 0.9968437967636008 1.0 11.49013642693057 -8.518980095029066 24.920010987397017 0.9146025725018416 0.9743812229057573 0.010224464822779944 0.08186350885629862 325.54949201290685 2080907.6383788162 0.015512844867920452 0.017786149131377587 3.0270521634688194e-09 8.518980095029066 0.05977865040391572 FGLHGS(ph)SGK ddPTM_A549_PD325901_60min_R1 1 FGLHGSSGK 9 0 Q9NV70-2 Q9NV70-2 EXOC1 Exocyst complex component 1 1 FGLHGS(0.5)S(0.5)GK 55.806000000000004 0.0051952 8504800.0 3591.0 4065.9 4317.6 4124.1 4892.2 4428.7 4074.5 4171.0 4832.4 5197.7 4182.9 True False 3955.555676445523 4408.547662277289 4610.618299837967 4378.836290489331 4548.588749173776 4392.634135530803 4229.55732715195 4087.8061329137972 4629.311033123671 4869.516334954966 3668.4298175877852 1.0782694158359394 1.201753306316809 1.256836992691802 1.193654099499355 1.2399279733705655 1.1974153395196276 1.152961222502858 1.1143203866993365 1.2619325606091938 1.3274116112590557 1.0 11.840946969225834 -10.91821558341619 1.0743648879069567 0.9956529613292131 1.1956246094643828 0.0 0.11047253707945487 0.28094081565259166 0.5548679927691075 0.04379872358589852 0.00947082013282773 1.2072144261184623e-11 10.91821558341619 0.19997164813516966 FGLNVS(ph)SISR ddPTM_A549_PD325901_60min_R1 2 FGLNVSSISR 10 0 H0YHG0;F8VZQ9;P82979 H0YHG0 SARNP SAP domain-containing ribonucleoprotein 1 FGLNVS(0.931)S(0.068)IS(0.001)R;FGLNVS(0.757)S(0.243)ISR 54.023 0.020011 2836900.0 2389.7 2769.2 2705.9 2926.6000000000004 2858.6000000000004 3000.3 2854.6 2917.2 3097.8 3198.2 3255.5 True False 2632.30058479584 3002.570202508244 2889.5386458985427 3107.369435209155 2657.821797634635 2975.866551546294 2963.2333650970572 2859.0141575008715 2967.610238889683 2996.2651061917745 2855.094138314813 0.9219663020812077 1.0516536608073026 1.0120642283284083 1.0883597123852613 0.9309051361799875 1.04230067639828 1.0378758883397352 1.0013729912206581 1.0394088934108776 1.0494452935833094 1.0 11.47932259965157 FGMT(ph)PSK ddPTM_A549_MK2206_60min_R1 1 FGMTPSK 7 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 FGMT(0.968)PS(0.032)K 47.869 0.027596 12118000.0 3458.5 3714.4 3371.6 2957.3 4861.2 3677.5 3128.8 3507.3 4878.3 4990.6 5456.0 True False 4042.210247793191 3903.4470945148546 3849.7435783692426 3681.838632758242 4146.1239195927 4066.6506090730672 3697.2624601568064 4004.4705156557725 3773.3728390443325 3863.2199938777703 4101.124622060421 0.985634580829287 0.9517991902800914 0.9387043635935932 0.8977631679255024 1.010972428706561 0.9915940098962334 0.9015240454456825 0.9764322922827717 0.9200824619537106 0.9419903928539665 1.0 12.001803868584918 -8.68289353584253 0.003825336358445236 1.9161009779644642 5.650807847454352e-08 0.0 0.038309389418209196 15551.060980876175 48.18414284601313 12073.787294570579 12059.357854305938 2.0754222298778842e-09 8.68289353584253 -1.9161009214563858 FGMT(ph)PSK ddPTM_A549_PD325901_60min_R1 5 FGMTPSK 7 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 FGMT(0.993)PS(0.007)K;FGMT(0.995)PS(0.005)K;FGMT(0.892)PS(0.108)K;FGMT(0.98)PS(0.02)K;FGMT(0.549)PS(0.451)K 74.464 0.013000999999999999 68990200.0 17321.899999999998 18113.7 18512.800000000003 18128.6 20243.7 19468.7 19163.200000000004 19295.8 20209.4 21024.8 22683.1 True False 19080.406536291186 19640.20506903568 19769.189934509966 19248.362448962172 18821.852348973705 19310.153362026926 19892.46606250541 18910.93013173773 19360.069198081594 19697.290539885176 19893.222500018055 0.9591410610459853 0.9872812244983363 0.9937650842889846 0.9675839321127938 0.9461439617918426 0.9706900609998907 0.9999619751142559 0.9506217573206435 0.9731992490439406 0.9901508184441862 1.0 14.27998937659706 -10.493956254306234 0.8104366610098022 1.0001160097980337 0.9725061947628817 0.22135254661764614 0.01622559836967866 0.6626548205147049 0.7812511645278886 0.010864077348969148 0.0030986043794401005 3.2065923024528623e-11 10.493956254306234 -0.02760981503515203 FGPGS(ph)PPVQAK ddPTM_A549_PD325901_60min_R1 2 FGPGSPPVQAK 11 0 Q969F2 Q969F2 NKD2 Protein naked cuticle homolog 2 1 FGPGS(1)PPVQAK;FGPGS(1)PPVQAK 96.604 0.00028143 7046600.0 7997.4 8124.6 8632.4 9113.2 9629.3 9677.8 9318.1 9857.7 10428.3 9899.4 9938.1 True False 8809.290160625287 8809.288555286179 9218.246574838158 9676.101666421131 8952.971187281591 9598.987205464364 9672.705394559975 9661.080440283959 9990.034816390118 9274.35019455783 8715.776702806466 1.010729216799314 1.010729032611586 1.0576506132689123 1.1101823734545013 1.027214382901612 1.1013346868298617 1.1097927040105764 1.1084589210704658 1.1462013262883781 1.0640876322097035 1.0 13.08941351990888 -5.854814141905262 3.7655375464676366 1.0778385782760709 1.009926576749955 0.3261064760283784 0.039415430539619614 0.28937082336967784 7.743862457298578 0.007752472573664842 0.027876701320876916 1.396966070477909e-06 5.854814141905262 -0.06791200152611587 FGQAATMEGIGAIGGT(ph)PPAFNR ddPTM_A549_MK2206_60min_R1 15 FGQAATMEGIGAIGGTPPAFNR 22 0 Q15233;Q15233-2 Q15233 NONO Non-POU domain-containing octamer-binding protein 1 FGQAAT(0.002)MEGIGAIGGT(0.998)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAAT(0.002)MEGIGAIGGT(0.998)PPAFNR;FGQAAT(0.002)MEGIGAIGGT(0.998)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAAT(0.001)MEGIGAIGGT(0.999)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR 166.06 1.8841999999999998e-33 176592200.0 10649.240000000002 11580.120000000003 12635.109999999999 10075.2 16193.79 12736.26 12094.1 12245.26 19388.270000000004 15355.3 18130.170000000002 True False 12446.571363079132 12169.498645308364 14426.958590725164 12543.624452292921 13811.704942783892 14084.002579554848 14291.441421433916 13981.063104535964 14996.85780170512 11886.52706528099 13627.948421763404 0.913312185948866 0.8929809732677046 1.0586302607137672 0.9204338073558562 1.0134837992728998 1.0334646231169426 1.048686198328351 1.0259110668637876 1.1004486763213466 0.8722169102356289 1.0 13.73428077188157 -5.773094476197126 0.5820042512296788 1.046952690230149 0.8550573131074921 0.09920094752812147 0.06902438990039697 1.453962291346281 0.46677300221431006 0.009128937214825187 0.16623120551958126 1.6861861734191432e-06 5.773094476197126 -0.1918953771226568 FGQAATMEGIGAIGGT(ph)PPAFNR ddPTM_A549_PD325901_60min_R1 11 FGQAATMEGIGAIGGTPPAFNR 22 0 Q15233;Q15233-2 Q15233 NONO Non-POU domain-containing octamer-binding protein 1 FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAAT(0.008)MEGIGAIGGT(0.992)PPAFNR;FGQAAT(0.001)MEGIGAIGGT(0.999)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAAT(0.042)MEGIGAIGGT(0.958)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR 171.64 1.7710999999999997e-40 330374600.0 18189.460000000003 16863.87 17504.879999999997 19497.0 22940.05 21668.56 21090.05 21542.32 21118.170000000006 22229.410000000007 22068.900000000005 True False 20036.040588827287 18285.04750865691 18692.866422194646 20701.2854091003 21328.820026876216 21492.098431548166 21892.643393668175 21112.641527976877 20230.646755314418 20825.84125890517 19354.565206283456 1.0352100589850808 0.9447408047544603 0.9658117463742357 1.0695815270693672 1.1020046071586158 1.1104407772782598 1.1311358927639839 1.0908352268808736 1.0452648530046307 1.0760170035823933 1.0 14.240386277890892 -6.257541850278093 24.80719825720382 1.0493067493131736 0.9782028601891225 0.36966813711303814 0.04575639504004196 339.65454228687713 2161838.2246031887 0.007927876500361808 0.02015397469215908 5.526601489316638e-07 6.257541850278093 -0.07110388912405108 FGS(ph)ADNIAHLK ddPTM_A549_MK2206_60min_R1 1 FGSADNIAHLK 11 0 G3V207;Q9ULS5;A0A0C4DFR1;O75069-3;O75069-5;O75069-2;O75069 G3V207 TMCC3;TMCC2 Transmembrane and coiled-coil domains protein 3;Transmembrane and coiled-coil domains protein 2 1 FGS(1)ADNIAHLK 45.79 0.012711 927350.0 386.07 345.93 447.2 337.4 453.8 313.87 335.42 400.93 479.91 467.71 643.64 True False 451.22917749472816 363.53635941350507 510.61968449600306 420.06301514646145 387.0466211452249 347.083515069956 396.3614722531949 457.7630552966295 371.21115125879214 362.0539861612975 483.80642443969384 0.9326647078267014 0.7514087061463146 1.0554214634238521 0.8682460462011125 0.8000030623683254 0.7174016249823895 0.8192563228407503 0.9461698567289062 0.7672720586310928 0.7483447260556733 1.0 8.918286116690224 -11.000057741604078 1.2555436240220383 1.0006947667746044 0.8421635275498108 0.0 0.11928953526598145 0.5000321039616085 1.392760577234965 0.06817356077100781 0.015249787470271486 9.998670538813238e-12 11.000057741604078 -0.15853123922479362 FGS(ph)ADNIAHLK ddPTM_A549_PD325901_60min_R1 2 FGSADNIAHLK 11 0 G3V207;Q9ULS5;A0A0C4DFR1;O75069-3;O75069-5;O75069-2;O75069 G3V207 TMCC3;TMCC2 Transmembrane and coiled-coil domains protein 3;Transmembrane and coiled-coil domains protein 2 1 FGS(1)ADNIAHLK;FGS(1)ADNIAHLK 68.809 0.0011985 3617200.0 977.23 633.3 992.6700000000001 839.22 1145.06 662.63 938.26 1046.93 731.3499999999999 975.28 1094.6599999999999 True False 1076.4376702012962 686.6704135665428 1060.0385556096326 891.0567133930934 1064.6349358425498 657.2337609742764 973.9659977355728 1026.0481598493038 700.6139028381338 913.7006543576736 960.0237596214696 1.12126148901328 0.7152639782970497 1.104179500752771 0.9281611048297708 1.1089672783331193 0.6846015573962658 1.014522805268487 1.0687737147816707 0.7297880868223311 0.9517479595691872 1.0 9.906926301300073 -7.225633716410557 24.99598462482051 0.8858994114477622 0.9822835447047116 0.06184756381834933 0.15275784216904473 1301.732457674614 908742.0068696061 0.0232568863404429 0.0402812791415811 5.9479359553282164e-08 7.225633716410557 0.09638413325694939 FGS(ph)ADNIPNLK ddPTM_A549_MK2206_60min_R1 1 FGSADNIPNLK 11 0 E9PC87;O94876;Q6N039;O94876-2 E9PC87 TMCC1;DKFZp686H13261 Transmembrane and coiled-coil domains protein 1 1 FGS(1)ADNIPNLK 86.772 0.00031073 3146500.0 3027.7 3153.4 2826.4 2673.0 4060.2 3272.8 3362.9 3186.5 4678.1 3795.2 4393.6 True False 3538.7017398419666 3313.894590739593 3227.226020258283 3327.8851199955307 3462.949958514415 3619.125523691184 3973.8953999173254 3638.1961332469787 3618.5178193906254 2937.861684119128 3302.5478628087717 1.0715065721507362 1.0034357497308672 0.9771928081955401 1.0076720333025575 1.0485691963807675 1.0958586140257078 1.2032816979486807 1.1016331282335277 1.0956746032783082 0.889574294199787 1.0 11.689363754820484 -6.894137821824284 4.275432150288392 1.0674344403523848 1.0116302633352452 0.08418225511570976 0.07525963486297745 0.35576770787204753 11.703331200376873 0.009578340886231874 0.01861571419264091 1.2760337997183796e-07 6.894137821824284 -0.05580417701713958 FGS(ph)ADNIPNLK ddPTM_A549_PD325901_60min_R1 1 FGSADNIPNLK 11 0 E9PC87;O94876;Q6N039;O94876-2 E9PC87 TMCC1;DKFZp686H13261 Transmembrane and coiled-coil domains protein 1 1 FGS(1)ADNIPNLK 129.71 1.0039999999999999e-07 3861100.0 3111.2 3035.5 3403.4 3676.0 3826.9 2998.1 3139.8 3449.8 3167.6 3194.1 4045.3 True False 3427.046733655614 3291.312238088176 3634.3751903067728 3903.058171198272 3558.111746088287 2973.684467616887 3259.286807164485 3380.9910326842537 3034.4767876257206 2992.4239808914854 3547.7537452695165 0.9659764966001797 0.9277172189520558 1.0244158561322796 1.1001491229210902 1.0029195940762747 0.838187958107837 0.9186902590153936 0.9529948455955772 0.8553233977053266 0.8434700364650468 1.0 11.792690158222118 -7.052045675318524 24.89811296590657 0.9247646422322467 1.0068736769025024 0.3760504375540541 0.06206080907139885 357.0255710312603 170796.73673717753 0.010325668234727295 0.017884682721725467 8.870627135864184e-08 7.052045675318524 0.08210903467025565 FGS(ph)ADNIPNLKDSLEEGQVDDAGK ddPTM_A549_MK2206_60min_R1 2 FGSADNIPNLKDSLEEGQVDDAGK 24 1 E9PC87;O94876;Q6N039;O94876-2 E9PC87 TMCC1;DKFZp686H13261 Transmembrane and coiled-coil domains protein 1 1 FGS(1)ADNIPNLKDSLEEGQVDDAGK;FGS(1)ADNIPNLKDSLEEGQVDDAGK 137.88 1.1182e-23 8640400.0 2279.69 2257.2 2229.2 1968.7800000000002 3790.8 2734.5 2284.56 2713.2 3525.4 3564.2 3450.9 True False 2664.445938930652 2372.081838719288 2545.3340802291814 2451.1311883818944 3233.178341642396 3023.862974985805 2699.634980176374 3097.804408826516 2726.9025289069723 2759.0447445555938 2593.9462900051876 1.0271785307186616 0.914468371168373 0.9812593614743237 0.9449429226142506 1.2464322619555588 1.1657384683087473 1.0407443633580304 1.1942438518340797 1.0512563577025793 1.0636475994844428 1.0 11.34093289226042 FGS(ph)ADNIPNLKDSLEEGQVDDAGK ddPTM_A549_PD325901_60min_R1 2 FGSADNIPNLKDSLEEGQVDDAGK 24 1 E9PC87;O94876;Q6N039;O94876-2 E9PC87 TMCC1;DKFZp686H13261 Transmembrane and coiled-coil domains protein 1 1 FGS(1)ADNIPNLKDSLEEGQVDDAGK;FGS(1)ADNIPNLKDSLEEGQVDDAGK 258.73 8.682899999999999e-112 17218400.0 5716.799999999999 4659.2 5864.4 5109.6 6697.6 5965.1 5300.1 5687.0 5742.8 6001.9 7267.6 True False 6297.165327514273 5051.847135463824 6262.393449501984 5425.20838725644 6227.1836814656535 5916.522203322605 5501.798205826007 5573.568323634808 5501.450087124954 5622.93900970934 6373.731273112191 0.9879872648661994 0.7926043504179755 0.98253176689769 0.8511824792712663 0.9770075666251017 0.9282666541467886 0.8631989599303528 0.8744592586052539 0.8631443422054855 0.8822052215206979 1.0 12.637922478688251 -10.89516729441441 1.1511901980622594 0.9998893418598029 0.8980281315775107 0.0 0.06837389453045846 0.46858011803264654 1.1047949880062282 0.0377534968083596 0.009072512592991206 1.2730126098458632e-11 10.89516729441441 -0.10186121028229222 FGS(ph)LEKR ddPTM_A549_MK2206_60min_R1 1 FGSLEKR 7 1 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 FGS(1)LEKR 48.794 0.023499000000000003 6672500.0 932.99 1102.7 1066.0 556.8 909.61 963.71 805.56 585.76 1339.5 1180.3 1087.1 True False 1090.4559025845224 1158.8227199874893 1217.1748293218689 693.2160249957016 775.8075739530813 1065.689152541076 951.9198246624636 668.7932738147649 1036.1053887419557 913.6694102460489 817.1430675663275 1.3344736630174128 1.4181393271055653 1.4895492327273163 0.8483410708730429 0.9494146187443595 1.3041647109789303 1.1649365483788996 0.8184530963550993 1.2679608135546656 1.1181266127205887 1.0 9.674444881118289 -6.240601588626168 24.991690954647414 1.0949320258703972 1.4144626293982343 0.505875169957377 0.15333884465820055 604.5736864879391 725091.2406348661 0.022989960339185 0.060753190396614885 5.746433845788225e-07 6.240601588626168 0.31953060352783713 FGS(ph)LEKR ddPTM_A549_PD325901_60min_R1 2 FGSLEKR 7 1 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 FGS(1)LEKR;FGS(1)LEKR 90.65700000000001 0.005229 24786000.0 5235.1 5741.700000000001 4936.4 5332.8 5972.0 5430.5 4955.4 5761.0 5752.1 5175.9 6210.1 True False 5766.563498123074 6225.5732094979 5271.413788984652 5662.194944332466 5552.547322281547 5386.275808476534 5143.980458698927 5646.092335582929 5510.359240466572 4849.092790675378 5446.297069067368 1.0588044362975868 1.1430836641020716 0.9678895077031368 1.0396412227477096 1.0195087142450665 0.9889794368853418 0.9444913476928259 1.036684606803825 1.0117625187511436 0.8903467308487716 1.0 12.41105996120127 -5.763644392927186 24.99999922795421 1.0038769186632073 1.1009440557827863 0.43407872051354834 0.046866624030682195 24.967968157781684 283097.9991422674 0.004010273216377408 0.013415058447983286 1.7232790451199807e-06 5.763644392927186 0.09706713711957904 FGS(ph)NINLEADES ddPTM_A549_MK2206_60min_R1 2 FGSNINLEADES 12 0 Q9NQP4 Q9NQP4 PFDN4 Prefoldin subunit 4 1 FGS(1)NINLEADES;FGS(1)NINLEADES 97.551 0.00025348 2536000.0 1106.8500000000001 1103.02 1225.19 1161.26 1280.12 996.87 997.0 1044.8 1727.3400000000001 1057.99 1325.49 True False 1293.6592201156263 1159.1590066206588 1398.940365043958 1445.7687521309424 1091.8160437647093 1102.358121731249 1178.1419946229664 1192.9035995658057 1336.1002479951699 818.9893241940335 996.3342513370355 1.2984188974529323 1.1634238259551148 1.4040873965405116 1.4510880763065066 1.0958330924582202 1.1064139572155973 1.1824766568467893 1.1972925732152468 1.3410160758823495 0.8220025790491362 1.0 9.960486010229717 -10.921021652295824 1.0994045929491543 0.9957082124868506 1.2527299389522752 0.49386765083533957 0.12446456626876332 0.4446752977931609 0.9281273136886942 0.09002139661848048 0.019851929516876077 1.199439502098676e-11 10.921021652295824 0.25702172646542465 FGS(ph)NINLEADES ddPTM_A549_PD325901_60min_R1 1 FGSNINLEADES 12 0 Q9NQP4 Q9NQP4 PFDN4 Prefoldin subunit 4 1 FGS(1)NINLEADES 103.85 0.00018811 2496900.0 1442.9 989.65 1012.6 886.62 1198.8 984.49 701.43 1106.6 1074.3 1175.8 1618.2 True False 1589.3821457931615 1073.0512786769773 1081.321125258459 941.3845037398827 1114.600423635485 976.4726398466189 728.123302487224 1084.5279948890934 1029.1509069788847 1101.559787336717 1419.1716586149698 1.1199365039070097 0.7561109835889859 0.7619382184631325 0.6633337820870944 0.7853880232665237 0.6880581597856881 0.5130621782553286 0.7641978955157056 0.7251771839801796 0.7761991163294341 1.0 10.470833388545673 -10.616095668171546 0.8831335655915098 1.000810980741053 0.743274951883773 0.033769615587735835 0.1515317559796765 0.564878724589688 0.7818527885203926 0.092995980517327 0.024944697301552382 2.4204957912538116e-11 10.616095668171546 -0.25753602885728 FGS(ph)PKKDVDEYER ddPTM_A549_MK2206_60min_R1 1 FGSPKKDVDEYER 13 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 FGS(0.977)PKKDVDEY(0.023)ER 50.188 0.0059153 47470000.0 1837.7 2429.5 1669.9 1934.2 2308.6 2052.2 1995.3 1715.7 2734.3 2830.3 2457.6 True False 2147.8588325486617 2553.151172766487 1906.7169300981118 2408.079086829538 1969.0079981839265 2269.3624418598906 2357.8201824184603 1958.9057291108857 2114.9854157798654 2190.9332642712807 1847.310093690559 1.1626953373364977 1.3820912804443122 1.0321585621225453 1.3035597515838144 1.0658784385518294 1.2284685985373225 1.2763532178336143 1.0604098011489673 1.1449000484561551 1.1860127174935913 1.0 10.85121034539454 -12.853281634916408 0.1547776026185047 0.6447407065865547 1.2592696908072356 0.015674338078495498 0.115536316766201 22.72733167662597 0.42772893761394654 2.8632916991628714 0.19436074442119697 1.4019042911069273e-13 12.853281634916408 0.6145289842206809 FGS(ph)PKKDVDEYER ddPTM_A549_PD325901_60min_R1 2 FGSPKKDVDEYER 13 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 FGS(0.994)PKKDVDEY(0.006)ER;FGS(0.999)PKKDVDEY(0.001)ER 79.805 0.00015069999999999998 146090000.0 3025.8 3076.08 3393.3999999999996 4001.1000000000004 3875.0 3690.5 2950.3199999999997 3111.61 4172.5 4049.7 4014.0 True False 3332.9769885237715 3335.3120571037 3623.6965301718897 4248.2388598426 3602.8333680242777 3660.4457915813764 3062.59604207705 3049.546497539176 3997.144335259604 3794.001250873873 3520.30344684247 0.946786843478871 0.9474501580525119 1.0293705031088038 1.2067820072877666 1.0234439793125882 1.0398097342615753 0.8699806957903132 0.8662737583813865 1.1354544844265728 1.0777483555506828 1.0 11.781484077838892 -5.785143289946845 5.628083362510343 1.0427439281987256 0.9462136454383565 0.07983492636062572 0.09534260482614064 0.2712003238154479 25.063524492097823 0.01442994654516675 0.04944546968238053 1.6400485707329607e-06 5.785143289946845 -0.09653028276036912 FGS(ph)PKKDVDEYERR ddPTM_A549_PD325901_60min_R1 2 FGSPKKDVDEYERR 14 3 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 FGS(0.92)PKKDVDEY(0.08)ERR;FGS(0.999)PKKDVDEY(0.001)ERR 57.52 0.0035112999999999998 36225000.0 3412.0 3637.8 2952.8999999999996 3646.6000000000004 3451.6 4481.700000000001 3764.2 4228.7 4727.3 4188.200000000001 4435.0 True False 3758.383728218358 3944.370172860212 3153.3015512302018 3871.8421999705147 3209.1715233735727 4445.2025211029 3907.4486908492754 4144.355261149026 4528.628020628576 3923.7563372373165 3889.523115781352 0.9662839418460045 1.0141012292371585 0.8107167530219824 0.9954542201487122 0.8250809746708226 1.1428656904150885 1.0046086819731685 1.0655175808915283 1.1643144637074196 1.0088013929823598 1.0 11.9253775656647 -7.269338525244307 24.967741031997853 1.0763908847310117 0.9252879742990048 0.4523907683816317 0.0771563135018424 419.969342243227 1327444.354469256 0.012306767627798223 0.019887825389918637 5.378503737561722e-08 7.269338525244307 -0.15110291043200696 FGSTGS(ph)TPPVS(ph)PTPSER ddPTM_A549_PD325901_60min_R1 1 FGSTGSTPPVSPTPSER 17 0 E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6 E7ER32 MKL1;mkl1 MKL/myocardin-like protein 1 2 FGS(0.001)T(0.009)GS(0.732)T(0.258)PPVS(0.876)PT(0.122)PS(0.002)ER 119.92 1.1030999999999998e-09 10273000.0 3208.5 4031.2 2558.4 3229.7 3586.2 3162.1 2773.0 2903.7 3503.5 4164.8 5012.1 True False 3534.22455802714 4370.923371497628 2732.028408908987 3429.19123381911 3334.3176837183655 3136.3489059909134 2878.5280324438236 2845.7834255914167 3356.260078749439 3901.8338172307876 4395.643474319668 0.8040289388060862 0.9943762266056244 0.621530937363348 0.7801340699838857 0.7585505292224438 0.7135130326911555 0.6548593054147426 0.6474099735834173 0.7635423797124268 0.8876593017668911 1.0 12.101858660328237 -10.387608304385905 0.8655652415020602 0.9924663798136137 0.7486295248896694 0.3405117410373202 0.10090843631597128 0.391799392655554 0.5534750636248905 0.055716096071878864 0.018953683580373627 4.0962994353321846e-11 10.387608304385905 -0.24383685492394436 FGSTGST(ph)PPVS(ph)PTPSER ddPTM_A549_MK2206_60min_R1 1 FGSTGSTPPVSPTPSER 17 0 E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6 E7ER32 MKL1;mkl1 MKL/myocardin-like protein 1 2 FGST(0.002)GS(0.102)T(0.896)PPVS(0.653)PT(0.342)PS(0.005)ER 110.57 8.460200000000002e-09 6809100.0 1417.4 1557.7 1286.4 1131.7 2038.1 1550.6 1427.0 1781.5 2359.0 2474.9 2541.4 True False 1656.622467897085 1636.9802765253569 1468.8308634518307 1408.966550803944 1738.2981898547434 1714.6834627950234 1686.2674286128108 2034.033080614934 1824.6902665489163 1915.818371107301 1910.3002409282162 0.8672052865847575 0.8569230330672769 0.7689005277715533 0.7375628818008871 0.9099607237708891 0.8975989355274632 0.8827237690099711 1.0647714097688623 0.9551850685326292 1.0028886193179787 1.0 10.89958368839796 -7.566898204637424 1.1915064545537408 0.9836759742806832 0.8149659658163417 0.6700631376062349 0.054082189496137155 0.20674777625295288 0.5893771932305484 0.00925481740664224 0.01671765972763559 2.7108269548952137e-08 7.566898204637424 -0.16871000846434148 FGSTGST(ph)PPVS(ph)PTPSER ddPTM_A549_PD325901_60min_R1 1 FGSTGSTPPVSPTPSER 17 0 E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6 E7ER32 MKL1;mkl1 MKL/myocardin-like protein 1 2 FGST(0.001)GS(0.086)T(0.912)PPVS(0.984)PT(0.015)PSER 107.5 1.4154e-08 9775900.0 3168.6 4701.2 3874.5 3522.3 3683.2 3972.7 3825.6 4422.9 4451.5 4219.1 5014.9 True False 3490.273939399966 5097.386622862835 4137.446869261206 3739.864471276299 3424.5047383502006 3940.3476483444865 3971.1853014486474 4334.681789802074 4264.41893550824 3952.7053059638883 4398.099092070328 0.7935869261547221 1.1589976751668252 0.9407352546287391 0.8503365642714119 0.7786329199641054 0.8959206161245532 0.9029322028256715 0.9855807472863459 0.9696050148567342 0.8987303885650338 1.0 12.102664394090974 -8.26340124486558 22.4503600503735 0.9852408172018768 0.9072326703866758 0.0647181229982805 0.0978363186714644 67.44686310342155 771821.8286139249 0.01540077797690141 0.01910969918051167 5.452538680154964e-09 8.26340124486558 -0.07800814681520107 FGSTGST(ph)PPVSPTPSER ddPTM_A549_MK2206_60min_R1 1 FGSTGSTPPVSPTPSER 17 0 E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6 E7ER32 MKL1;mkl1 MKL/myocardin-like protein 1 1 FGST(0.003)GS(0.015)T(0.98)PPVSPTPSER 115.82 1.5905999999999999e-09 3742400.0 2068.2 2207.5 2201.8 2145.9 2941.1 2673.4 2454.2 2105.2 3105.1 3616.9 3770.6 True False 2417.261597364719 2319.8523210051544 2514.048348218471 2671.6455963331127 2508.4680860516105 2956.2974135407017 2900.096372320648 2403.6185469046072 2401.7998078257906 2799.839777953853 2834.255956734057 0.8528734293109346 0.8185048762068564 0.8870223390534691 0.9426267906345616 0.8850534758837183 1.0430594338230745 1.023230229235351 0.8480598025008025 0.8474181035482096 0.9878570674965215 1.0 11.468754336085432 -6.0030202365321035 3.276336793174785 0.9334740677470452 0.8360367565811465 0.30144867287791366 0.06417567783524734 0.2900131862727098 6.450618663003389 0.010571093258887724 0.03516426070433525 9.930697739288265e-07 6.0030202365321035 -0.09743731116589871 FGSTGST(ph)PPVSPTPSER ddPTM_A549_PD325901_60min_R1 1 FGSTGSTPPVSPTPSER 17 0 E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6 E7ER32 MKL1;mkl1 MKL/myocardin-like protein 1 1 FGS(0.002)T(0.007)GS(0.165)T(0.566)PPVS(0.206)PT(0.053)PS(0.002)ER 65.038 0.0026918000000000003 8003500.0 3522.0 4985.6 4890.6 4493.2 5258.0 4202.0 4556.7 4281.4 5204.3 4679.9 5076.6 True False 3879.550847240636 5405.754008964724 5222.505525566876 4770.7347592024125 4888.696219115267 4167.78030516866 4730.107712021915 4196.004118306675 4985.581369440762 4384.410315323269 4452.210383218856 0.8713763531623142 1.2141730834059274 1.173014093235889 1.0715429749645546 1.0980380077144605 0.9361148612558243 1.0624178340382346 0.9424541423563751 1.119799142518573 0.9847715938691628 1.0 12.120306051568202 -7.102298546226283 20.42756773936351 1.0403671712665719 1.0968902033040477 0.08465308696474572 0.09677679257910587 18.40864812630032 3662.034203083026 0.013934883194804527 0.0241360050110786 7.90135280078319e-08 7.102298546226283 0.056523032037475884 FGT(ph)FGGLGSK ddPTM_A549_MK2206_60min_R1 1 FGTFGGLGSK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGT(1)FGGLGSK 107.85 0.00027077 124670000.0 3920.6 4215.9 3929.4 3387.0 4729.6 3928.2 3549.6 4101.9 5830.1 5137.4 5945.5 True False 4582.301430532883 4430.471302435166 4486.648005944979 4216.815152048208 4033.882105263236 4343.879516671873 4194.516373233384 4683.356886541906 4509.591658756608 3976.857771920741 4469.068262547696 1.0253370862410225 0.9913635331024174 1.0039336484395656 0.9435557714314963 0.9026226202603645 0.971987730211027 0.9385661902694239 1.0479492841472173 1.0090675267926676 0.8898628390280262 1.0 12.125758365932693 -8.251078678436965 24.906778897540683 1.0076765838469717 0.9671370412751851 0.0 0.049035240873093876 761.0181842499865 1829464.2366323045 0.005631036469917213 0.007231315563659283 5.609463436576721e-09 8.251078678436965 -0.0405395425717866 FGT(ph)FGGLGSK ddPTM_A549_PD325901_60min_R1 2 FGTFGGLGSK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGT(0.972)FGGLGS(0.028)K;FGT(0.998)FGGLGS(0.002)K 140.09 1.1417e-07 569900000.0 22211.0 21599.0 25694.0 22507.0 24511.0 22062.0 27142.0 24938.0 21319.9 18317.199999999997 21367.6 True False 24465.844369126014 23419.22353169709 27437.749350573624 23897.2062728943 22789.43191835952 21882.334386632774 28174.903662672292 24440.592026517457 20423.898744949365 17160.648865967083 18739.520660376464 1.3055747162656888 1.2497237232548624 1.4641649510592347 1.2752303917476093 1.216116053947225 1.1677104651295374 1.5035018330136027 1.304227171519683 1.0898837336930616 0.9157464151285467 1.0 14.193796430212387 -8.83195399260513 3.476908626281847 1.0379476694994265 1.3120812533911554 0.6489389316930132 0.10082402868769873 0.11093139145702115 2.5817908235602514 0.017253573105766837 0.01836632717486609 1.4724684815057384e-09 8.83195399260513 0.2741335838917289 FGTEELFKDEATDGGGDNKEGEDS(ph)SVIHYDDK ddPTM_A549_PD325901_60min_R1 2 FGTEELFKDEATDGGGDNKEGEDSSVIHYDDK 32 2 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y5Z7;A0A2R8Y685 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 FGTEELFKDEATDGGGDNKEGEDS(0.5)S(0.5)VIHYDDK;FGT(0.001)EELFKDEAT(0.003)DGGGDNKEGEDS(0.491)S(0.491)VIHY(0.014)DDK 95.691 6.2394e-10 11922300.0 2579.8999999999996 3039.3999999999996 2482.8 3557.7000000000003 4070.7 3208.8 3149.2 3296.2 3253.4 3545.2 3257.3999999999996 True False 2841.8095487779997 3295.5409047752287 2651.297738289257 3777.451048877062 3784.7880751526263 3182.6685966742475 3269.044529308361 3230.454705181125 3116.670912003259 3321.3554669723844 2856.760450359906 0.9947664839801241 1.1535937163930015 0.9280784246208799 1.3222848448497542 1.324853147793965 1.1140831203656865 1.1443187435952193 1.130810497174917 1.0909808386666122 1.1626300226026816 1.0 11.480164350839352 -9.57537292315726 0.7606027244817006 1.012082792025728 1.1454272342068315 0.0 0.11969037601950683 0.7237792895493991 0.8985320717485697 0.041350273091520166 0.025186264573531122 2.65844130962784e-10 9.57537292315726 0.13334444218110342 FGTFGGLGS(ph)K ddPTM_A549_MK2206_60min_R1 3 FGTFGGLGSK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGT(0.479)FGGLGS(0.521)K;FGT(0.002)FGGLGS(0.998)K;FGTFGGLGS(1)K 119.45 5.8532e-05 161065000.0 12929.0 16471.1 12738.3 11157.9 17748.699999999997 14037.2 11833.5 13969.2 18471.2 17326.8 17421.1 True False 15111.09911629845 17309.4086362437 14544.782484381565 13891.586000897167 15137.889741560712 15522.607186860754 13983.493774694956 15949.3768788808 14287.50269244525 13412.663846014771 13094.960072099855 1.1539629775957991 1.321837450510686 1.110716062080304 1.0608345443140834 1.1560088505969197 1.185387897434926 1.0678531051414362 1.2179782749290369 1.091068824477459 1.0242615305556995 1.0 13.676724040316893 -14.999999991007195 0.07934016374240763 0.4479735355734393 1.3155272382605485 0.3969273031378565 0.06919365114512414 102.52521673775946 0.6019414569074112 9.796159588933099 1.0258171918858003 1.0000000207066984e-15 14.999999991007195 0.8675537026871092 FGTFGGLGS(ph)K ddPTM_A549_PD325901_60min_R1 2 FGTFGGLGSK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGTFGGLGS(1)K;FGT(0.093)FGGLGS(0.907)K 119.74 5.6342e-05 77137000.0 10319.2 10764.0 11165.4 9488.3 13462.900000000001 10153.5 11406.7 11991.099999999999 9736.6 11697.5 13258.5 True False 11366.79758740647 11671.120056261281 11923.151187004538 10074.370741507217 12517.312348483627 10070.813262382195 11840.78821048575 11751.928103664031 9327.40456193857 10958.917853692166 11627.78855255628 0.97755454840186 1.0037265472715768 1.0254014452630655 0.8664047076511762 1.0764998255607074 0.8660987613305201 1.0183181571428426 1.0106761101258983 0.8021649619598572 0.9424765340510886 1.0 13.505289121448234 FGTFGGLGS(ph)KSK ddPTM_A549_MK2206_60min_R1 1 FGTFGGLGSKSK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGT(0.001)FGGLGS(0.988)KS(0.012)K 50.305 0.0081855 5353000.0 2956.1 4989.7 4179.9 2814.2 1941.1 1897.0 1662.3 1588.3 2156.5 5414.5 5446.5 True False 3455.0174102939013 5243.654417268136 4772.672672685251 3503.6791263342398 1655.5667613596213 2097.7392808733134 1964.318392840277 1813.4463889647484 1668.0561932228657 4191.360689466433 4093.9837342470805 0.8439255342887456 1.2808195531906503 1.1657771458056336 0.8558116870434017 0.4043901658696 0.5123956070771019 0.4798061058250717 0.44295397995719127 0.4074408452747885 1.0237853791173552 1.0 11.999289655082109 -6.485809992615577 4.591807446131116 0.6393607480283122 1.107114190190909 0.4655258111521515 0.2280242257163311 0.17015159418117554 8.315689703465877 0.038248446841687725 0.08872481357042564 3.2673074827864036e-07 6.485809992615577 0.46775344216259673 FGTFGGLGS(ph)KSK ddPTM_A549_PD325901_60min_R1 2 FGTFGGLGSKSK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGTFGGLGS(1)KSK;FGTFGGLGS(0.991)KS(0.009)K 103.39 5.454e-05 38284000.0 8575.8 10491.4 11410.8 10180.4 14121.2 14903.2 13385.3 15720.2 11245.8 10773.2 13212.5 True False 9446.408902829708 11375.547097571494 12185.205506714627 10809.220186634084 13129.375627495334 14781.833280340212 13894.684916217208 15406.648278741664 10773.178134322943 10092.978313434189 11587.44626093825 0.8152278500461257 0.9817130402510623 1.0515867976701172 0.9328388622670383 1.1330689551290511 1.2756765336785525 1.1991153704899373 1.3295982507101758 0.9297284226154094 0.8710269792109437 1.0 13.500275027633682 -4.141987556021847 12.961313356958922 1.0263981041510797 0.4345327853421228 0.0 0.16108707292893593 0.0 0.0 0.021813576301224265 0.0 7.211281416012628e-05 4.141987556021847 -0.5918653188089569 FGVIFAGAQK ddPTM_A549_PD325901_60min_R1 1 FGVIFAGAQK 10 0 Q9Y617-2;Q9Y617 Q9Y617-2 PSAT1 Phosphoserine aminotransferase 0 62.659 0.019175 2427600.0 1915.3 2066.5 1632.1 1857.9 1779.4 2434.7 1958.2 2147.3 2373.2 2284.7 2283.0 False True 2109.739846030662 2240.651207382381 1742.8641206145867 1972.6582634029555 1654.4210825967489 2414.872610422212 2032.7203725681552 2104.4704169757383 2273.4626570253063 2140.4436520906575 2002.2054731293872 1.053707960718538 1.1190915405302087 0.8704721588292046 0.985242668585732 0.8262993507908748 1.2061062877067448 1.0152406433047425 1.0510761483867657 1.1354791940868847 1.0690429532915062 1.0 10.967374320700976 -7.26556678225573 24.997466331426097 1.0692127363368438 0.9744026369179556 0.25621173336218417 0.09107504665920597 468.1702130559129 2835451.1218004273 0.014146480635841337 0.02309703883801964 5.425418172680697e-08 7.26556678225573 -0.09481009941888818 FHDFDHRDR ddPTM_A549_PD325901_60min_R1 1 FHDFDHRDR 9 1 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 0 75.378 0.0074059 5631300.0 210.98 307.67 239.27 304.44 332.89 469.36 300.78 153.95 528.66 282.04 362.73 False True 232.3985342847329 333.59843066795906 255.5083010473943 323.2445673665946 309.50895480815524 465.5376877758118 312.2263474931316 150.87934647856136 506.44225866467144 264.23194626675263 318.1165095349203 0.7305453420965002 1.048667455693114 0.8031909485645435 1.0161200619206197 0.9729421313614024 1.4634188224195537 0.9814842616926736 0.4742895824524915 1.5920024377391777 0.8306137479411372 1.0 8.313411436239042 -6.706732715932592 0.5374522467877394 1.2278107816054034 0.7969737441920409 0.0 0.3138435178909385 1.9685285691592163 0.8617086116710859 0.07206442092522833 0.4054283227602751 1.9645689876542966e-07 6.706732715932592 -0.43083703741336243 FHFPPLDTHS(ph)PTNDVQPGR ddPTM_A549_MK2206_60min_R1 3 FHFPPLDTHSPTNDVQPGR 19 0 P41162 P41162 ETV3 ETS translocation variant 3 1 FHFPPLDT(0.009)HS(0.984)PT(0.007)NDVQPGR;FHFPPLDT(0.142)HS(0.833)PT(0.025)NDVQPGR;FHFPPLDT(0.024)HS(0.944)PT(0.032)NDVQPGR 69.398 0.00041654 15803600.0 7072.0 8438.3 8914.7 7603.900000000001 9887.0 8485.0 7752.1 7242.8 12526.5 11679.8 10946.9 True False 8265.580706200219 8867.773427106578 10178.938509339274 9466.855841352042 8432.635397229704 9382.877068112844 9160.556225192271 8269.489080144735 9689.267750710052 9041.325068026608 8228.482610929837 1.0045084977418686 1.0776924308410856 1.2370371295211415 1.1504983712036143 1.0248105022460268 1.1402925073511891 1.1132740577253413 1.0049834788689265 1.1775278880506916 1.098784003750227 1.0 13.006410696898351 -11.05969856840986 1.3569704520424153 0.9997748815214961 1.1129625994988632 0.0012366610108488496 0.07562344017310636 0.49983322351545023 1.6364715489117032 0.051643883345978935 0.011360982281731364 8.715683111333175e-12 11.05969856840986 0.11318771797736715 FHFPPLDTHS(ph)PTNDVQPGR ddPTM_A549_PD325901_60min_R1 2 FHFPPLDTHSPTNDVQPGR 19 0 P41162 P41162 ETV3 ETS translocation variant 3 1 FHFPPLDT(0.129)HS(0.854)PT(0.017)NDVQPGR;FHFPPLDT(0.167)HS(0.797)PT(0.036)NDVQPGR 78.324 0.00040868 6958900.0 1128.4099999999999 1021.62 1310.3899999999999 1374.63 1353.9299999999998 1462.4099999999999 1192.13 1670.03 1364.35 1478.53 1809.9 True False 1242.965352508462 1107.7155027757024 1399.3209454152 1459.5377730887587 1258.8346276049313 1450.5006178204897 1237.4971595085674 1636.7199415368102 1307.011114154929 1385.1753634724914 1587.2937739013923 0.7830720267070606 0.6978642019448361 0.881576535121047 0.9195133232970331 0.793069719230899 0.9138198874524152 0.7796270481594194 1.031138638888461 0.823421055160092 0.8726647746295153 1.0 10.632353449336577 -14.999999999999998 0.08958224947359152 1.464896631415644 0.7145762574250326 0.21688859916171188 0.08451017720381872 108.41226333784878 0.7090993620241113 10.024898719874614 0.8003035351101344 1.000000000000004e-15 14.999999999999998 -0.7503203739906114 FHGT(ph)VK ddPTM_A549_MK2206_60min_R1 2 FHGTVK 6 0 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 FHGT(1)VK;FHGT(1)VK 79.597 0.038596 43916000.0 5819.3 5066.6 4621.9 651.33 6239.200000000001 4928.5 4858.299999999999 5617.6 6452.9 6428.6 6537.4 True False 6801.455571774732 5324.468298801684 5277.354918989441 810.9058792393146 5321.421945018263 5450.030598726472 5740.990223146192 6413.91200317848 4991.328453163845 4976.374795143399 4913.983156938743 1.3841023370564063 1.0835340962215791 1.0739464809800177 0.16502007706198232 1.0829141604818484 1.1090861373895446 1.168296683117377 1.3052368716652551 1.0157398374709297 1.0126967545903278 1.0 12.262677197420652 FHGT(ph)VK ddPTM_A549_PD325901_60min_R1 2 FHGTVK 6 0 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 FHGT(1)VK;FHGT(1)VK 75.854 0.040554 48610000.0 7077.0 6429.900000000001 6552.599999999999 6431.2 7084.9 5432.1 5969.799999999999 5850.0 7385.7 7526.9 7808.8 True False 7795.451830187956 6971.770238736013 6997.298839984769 6828.4406176850725 6587.281065578115 5387.862778607013 6196.9840057999045 5733.317160763783 7075.304713463597 7051.650249451205 6848.367104061654 1.138293510224445 1.018019351591297 1.021747043296611 0.9970903302825628 0.9618761619352016 0.7867368522653466 0.9048849034574352 0.8371801735574963 1.033137477292558 1.0296834474993297 1.0 12.741544323581925 -4.884666425466334 1.1034973901616907 0.9750680579488339 1.351427964575528 0.3029270019346716 0.07868804919122128 4.109866506238535 2.2896173490357326 0.013225859966051098 2.1938063414397 1.3041681041783521e-05 4.884666425466334 0.37635990662669416 FHGTVK ddPTM_A549_PD325901_60min_R1 2 FHGTVK 6 0 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 81.71600000000001 0.045258 6498400.0 1165.89 1614.4 1252.01 1293.99 1548.74 1382.0900000000001 1061.2 1174.6599999999999 1481.3899999999999 1319.64 1346.24 False True 1284.2502945171454 1750.451153737292 1336.9789275477422 1373.9168234354875 1439.961845262948 1370.8347172704791 1101.5845467109225 1151.230484797057 1419.132329972492 1236.3177051888288 1180.661014518487 1.0877383759816153 1.4826026541167572 1.1323986403438644 1.1636844162215492 1.2196234376809778 1.1610739241945338 0.9330235632114824 0.9750728368604321 1.2019811889454668 1.0471402798821476 1.0 10.20537908947034 -7.529366808395517 24.723855140368876 1.0745461028494403 1.2208762973221496 0.34282222530045015 0.11669643224014338 162.60959613723344 619648.9476328226 0.01921663678089129 0.02854252638770119 2.9555151616782447e-08 7.529366808395517 0.14633019447270934 FHIQS(ph)R ddPTM_A549_PD325901_60min_R1 2 FHIQSR 6 0 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;H0Y6V3 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha 1 FHIQS(1)R;FHIQS(1)R 69.998 0.015795 5015200.0 490.69 450.68000000000006 646.23 508.28 299.16999999999996 383.04 749.69 387.31 570.49 578.44 699.54 True False 540.504487573114 488.66038526159787 690.0870538966758 539.675301212366 278.15733128047066 379.92064923650736 778.219863196109 379.5847982111827 546.5142892324154 541.9171996828122 613.5010147494224 0.8810164524240877 0.7965111279582572 1.12483441315665 0.8796648876494365 0.453393433088421 0.6192665376302298 1.268489936424904 0.618719104101596 0.8908123639463466 0.8833191578405982 1.0 9.260921919926554 -9.791406754862368 0.7989186032953396 0.9892519862336877 0.8321414152118779 0.02469407328857187 0.21967652177835723 1.1746770693517452 1.5654415085935245 0.08578957910077642 0.04596156055365798 1.6165652732759137e-10 9.791406754862368 -0.1571105710218098 FHKAS(ph)QED ddPTM_A549_MK2206_60min_R1 4 FHKASQED 8 1 O00567 O00567 NOP56 Nucleolar protein 56 1 FHKAS(1)QED;FHKAS(1)QED;FHKAS(1)QED;FHKAS(1)QED 66.435 0.0033060000000000003 24524700.0 7248.799999999999 6846.5 6932.700000000001 3806.6499999999996 6870.0 5562.599999999999 5891.2 5675.129999999999 8840.2 8946.199999999999 9588.2 True False 8472.220223855216 7194.957606234106 7915.861106228627 4739.279420887009 5859.432100633973 6151.230639844962 6961.554783072035 6479.597056856712 6837.908814898569 6925.247206594259 7207.185319142174 1.1755241260902685 0.9983033996814829 1.098329064080567 0.6575770166891026 0.8129986730147497 0.8534858432885564 0.9659186596162932 0.8990468220162178 0.9487627294301962 0.9608809680806887 1.0 12.815220226659903 -5.452266540549936 1.6835652345476262 0.9341260370353581 1.1931670157143595 0.3344376647092172 0.10825622495048084 0.697236194764922 2.5170784518960736 0.01635864524888277 0.25714615077861375 3.5296647637658796e-06 5.452266540549936 0.25904097867900133 FHKAS(ph)QED ddPTM_A549_PD325901_60min_R1 4 FHKASQED 8 1 O00567 O00567 NOP56 Nucleolar protein 56 1 FHKAS(1)QED;FHKAS(1)QED;FHKAS(1)QED;FHKAS(1)QED 64.297 0.007880700000000001 48662800.0 12807.099999999999 12014.8 12815.5 11637.3 16502.6 12468.5 12478.9 11705.400000000001 14689.3 14160.4 14227.099999999999 True False 14107.267363911287 13027.329361944267 13685.236895861926 12356.109590774113 15343.514306879346 12366.960669917995 12953.79136821609 11471.926614291346 14071.959804416756 13266.309927371025 12477.256893017571 1.1306385277525135 1.0440860097410132 1.0968145493197592 0.9902905499756718 1.2297185542012659 0.9911602186245521 1.038192246844352 0.9194269792354103 1.1278087744022967 1.063239303407708 1.0 13.6070131741799 FHLQDFDRLS(ph)ANR ddPTM_A549_PD325901_60min_R1 2 FHLQDFDRLSANR 13 1 Q86X19 Q86X19 TMEM17 Transmembrane protein 17 1 FHLQDFDRLS(1)ANR;FHLQDFDRLS(1)ANR 59.261 0.0027155 6685300.0 1498.23 1385.0700000000002 1291.77 1753.8 1437.69 1425.22 1557.23 1491.98 1750.01 1523.3 1434.52 True False 1650.329206661369 1501.794709803588 1379.4372802440446 1862.1282428312086 1336.7116141612453 1413.6134808501843 1616.4912397989526 1462.221288464332 1676.4631655237063 1427.1185780319954 1258.0831341715154 1.311780725641918 1.1937165907502318 1.0964595604029335 1.4801313142612587 1.062498636102859 1.1236248563025926 1.2848842782265413 1.1622612598071649 1.3325535650135762 1.1343595182776174 1.0 10.297011543361132 -10.968456389301505 1.2142649994888908 0.999010687065124 1.2326256559724713 0.1800775747162774 0.12116197617298437 0.4119526029102584 1.0726041106054618 0.08045947973621717 0.018276444639505392 1.0753345772136871e-11 10.968456389301505 0.23361496890734734 FHPEPYGLEDDQRS(ph)MGYDDLDYGMMSDYGTAR ddPTM_A549_MK2206_60min_R1 12 FHPEPYGLEDDQRSMGYDDLDYGMMSDYGTAR 32 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 FHPEPY(0.018)GLEDDQRS(0.647)MGY(0.259)DDLDY(0.073)GMMS(0.002)DYGTAR;FHPEPYGLEDDQRS(0.642)MGY(0.357)DDLDYGMMSDYGTAR;FHPEPY(0.007)GLEDDQRS(0.983)MGY(0.009)DDLDY(0.001)GMMSDYGTAR;FHPEPY(0.004)GLEDDQRS(0.644)MGY(0.326)DDLDY(0.024)GMMS(0.001)DYGTAR;FHPEPYGLEDDQRS(0.993)MGY(0.006)DDLDY(0.001)GMMSDYGTAR;FHPEPY(0.002)GLEDDQRS(0.5)MGY(0.451)DDLDY(0.046)GMMS(0.002)DYGTAR;FHPEPYGLEDDQRS(0.999)MGY(0.001)DDLDYGMMSDYGTAR;FHPEPY(0.001)GLEDDQRS(0.536)MGY(0.462)DDLDY(0.001)GMMSDYGTAR;FHPEPY(0.001)GLEDDQRS(0.716)MGY(0.284)DDLDYGMMSDYGTAR;FHPEPY(0.027)GLEDDQRS(0.888)MGY(0.07)DDLDY(0.012)GMMS(0.001)DY(0.001)GTAR;FHPEPYGLEDDQRS(0.899)MGY(0.1)DDLDYGMMSDYGTAR;FHPEPY(0.01)GLEDDQRS(0.879)MGY(0.106)DDLDY(0.005)GMMSDYGTAR 100.19 3.1567e-12 221340100.0 13339.7 15032.64 15065.720000000003 13998.01 19738.75 14475.249999999998 13635.91 14252.759999999998 22404.679999999997 20536.8 22435.969999999998 True False 15591.115235647485 15797.737166403129 17202.26563753383 17427.523078394548 16835.206022764007 16007.011347106707 16113.378340922027 16273.13237724687 17330.055752922075 15897.52261657295 16864.499447728907 0.9244932103660566 0.936745096726281 1.0200282368801885 1.0333851373656668 0.9982630124863359 0.949154251314724 0.9554614052355979 0.9649342055887893 1.0276056995724152 0.9426619904045727 1.0 14.04170187816069 -8.75704680853955 24.996484945982047 1.0130360252829453 0.9746810253169573 0.0 0.038691477283442396 134.13045371744758 763285.2803581947 0.006072543772000606 0.006766580750830547 1.7496580991825443e-09 8.75704680853955 -0.03835499996598801 FHPEPYGLEDDQRS(ph)MGYDDLDYGMMSDYGTAR ddPTM_A549_PD325901_60min_R1 17 FHPEPYGLEDDQRSMGYDDLDYGMMSDYGTAR 32 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 FHPEPYGLEDDQRS(0.969)MGY(0.031)DDLDYGMMSDYGTAR;FHPEPY(0.004)GLEDDQRS(0.431)MGY(0.392)DDLDY(0.161)GMMS(0.01)DY(0.001)GT(0.001)AR;FHPEPYGLEDDQRS(0.819)MGY(0.177)DDLDY(0.004)GMMSDYGTAR;FHPEPYGLEDDQRS(0.976)MGY(0.024)DDLDYGMMSDYGTAR;FHPEPY(0.002)GLEDDQRS(0.449)MGY(0.411)DDLDY(0.125)GMMS(0.01)DY(0.001)GT(0.001)AR;FHPEPY(0.007)GLEDDQRS(0.987)MGY(0.005)DDLDYGMMSDYGTAR;FHPEPY(0.006)GLEDDQRS(0.742)MGY(0.225)DDLDY(0.024)GMMS(0.003)DYGTAR;FHPEPYGLEDDQRS(1)MGYDDLDYGMMSDYGTAR;FHPEPY(0.017)GLEDDQRS(0.675)MGY(0.261)DDLDY(0.044)GMMS(0.003)DYGTAR;FHPEPYGLEDDQRS(1)MGYDDLDYGMMSDYGTAR;FHPEPYGLEDDQRS(0.662)MGY(0.337)DDLDY(0.001)GMMSDYGTAR;FHPEPYGLEDDQRS(0.999)MGY(0.001)DDLDYGMMSDYGTAR;FHPEPY(0.016)GLEDDQRS(0.622)MGY(0.361)DDLDY(0.001)GMMSDYGTAR;FHPEPY(0.005)GLEDDQRS(0.516)MGY(0.461)DDLDY(0.017)GMMSDYGTAR;FHPEPY(0.001)GLEDDQRS(0.847)MGY(0.151)DDLDY(0.001)GMMSDYGTAR;FHPEPY(0.004)GLEDDQRS(0.592)MGY(0.397)DDLDY(0.007)GMMSDYGTAR;FHPEPYGLEDDQRS(0.995)MGY(0.005)DDLDYGMMSDYGTAR 135.44 7.8936e-31 474810400.0 25526.18 27336.25 28160.15 30431.550000000003 31682.699999999997 33506.1 29532.320000000003 33663.7 33642.850000000006 33790.8 32490.1 True False 28117.57900221946 29639.97172407773 30071.267119738295 32311.237728435455 29457.416451381367 33233.237430512054 30656.18859830559 32992.25109483821 32228.958010662343 31657.243121226005 28494.02367171313 0.9867886447407083 1.0402171369536068 1.0553534827582438 1.1339654273015778 1.0338103453119758 1.1663230793025445 1.0758813480154052 1.1578656449138351 1.1310778141402682 1.1110134351665153 1.0 14.798371740114236 -5.450229115538999 1.7784467684466931 1.0803409226349652 0.9757757293963337 0.26889629706741836 0.05118146189581299 0.8510469075749718 3.5370401324863114 0.008828026180641792 0.1311453077370557 3.546262539495247e-06 5.450229115538999 -0.10456519323863145 FHQLDIDDLQSIR ddPTM_A549_MK2206_60min_R1 2 FHQLDIDDLQSIR 13 0 P16152;E9PQ63;A8MTM1;P16152-2;O75828 P16152 CBR1;CBR3 Carbonyl reductase [NADPH] 1;Carbonyl reductase [NADPH] 3 0 ; 88.552 0.00020492 4318800.0 773.88 684.04 544.03 608.5699999999999 1026.39 743.99 712.35 721.46 948.4300000000001 1155.48 1064.79 False True 904.4920244505403 718.8547142289306 621.1816345178012 757.6696773197458 875.4093906506116 822.7185279794077 841.7747741922467 823.729164378586 733.6121193314921 894.4562654842871 800.3732562910036 1.1300877651035364 0.898149342920531 0.7761149309216161 0.9466454199517488 1.0937514263124328 1.027918563636114 1.0517277627354782 1.0291812699937222 0.9165874966026624 1.1175489166508037 1.0 9.644529151544935 -5.244958158510912 23.787671996370037 0.9670996961244527 1.1300880142879535 0.1354050303170241 0.09471115024777155 1962.9716505136396 2833107.0273741586 0.012104821739603448 0.4202054690332777 5.689077388169919e-06 5.244958158510912 0.1629883181635008 FHQLDIDDLQSIR ddPTM_A549_PD325901_60min_R1 2 FHQLDIDDLQSIR 13 0 P16152;E9PQ63;A8MTM1;P16152-2;O75828 P16152 CBR1;CBR3 Carbonyl reductase [NADPH] 1;Carbonyl reductase [NADPH] 3 0 ; 88.075 0.0002065 6920200.0 955.61 906.24 985.98 1078.65 948.74 1048.27 898.95 1153.12 1223.37 1180.47 1264.85 False True 1052.6228237170994 982.612025249557 1052.8945319793947 1145.2757607081107 882.1037753753177 1039.7332366728108 933.1600341743149 1130.1201169948597 1171.9560132837728 1105.934922739729 1109.2814685447684 0.9489231124522457 0.8858094659587299 0.9491680532269724 1.0324482948503253 0.7952028411080572 0.9373033501017594 0.8412292647406238 1.0187857176388504 1.056500127800048 0.9969831409791515 1.0 10.115409765356414 -8.368852111970787 7.916975497049069 1.0271707863726478 0.914341576385113 0.4120162407558364 0.06013034244078849 0.19588922749876422 13.027333058277298 0.00956750035884094 0.011568183712388469 4.277085066979887e-09 8.368852111970787 -0.11282920998753476 FHS(ph)PHQEPTVVNQIVPLSGER ddPTM_A549_MK2206_60min_R1 1 FHSPHQEPTVVNQIVPLSGER 21 0 D6RAF2;Q6PIY7-2;Q6PIY7 D6RAF2 PAPD4 Poly(A) RNA polymerase GLD2 1 FHS(0.954)PHQEPT(0.046)VVNQIVPLSGER 63.573 0.0019421 1820000.0 324.64 309.44 247.79 182.85 352.74 178.2 259.77 229.41 304.7 366.97 468.31 True False 379.4312953140325 325.1891742748967 282.9303479903058 227.64825820844845 300.85241327185264 197.05700572041349 306.96684648265585 261.9295700386597 235.68593650591563 284.0712221282664 352.0157023015242 1.07788173321037 0.9237916722145285 0.8037435436557818 0.6466991577934016 0.8546562306875536 0.5597960671414067 0.8720260047369106 0.7440849039577788 0.6695324525723441 0.8069845187898494 1.0 8.45949597411252 -5.453661221882235 2.515784042287664 0.8029952914199816 1.0878860335056237 0.3681180329038577 0.11737290617808281 0.3992405462053789 4.049387714427827 0.02040279403490571 0.1995778849622565 3.5183478766981164e-06 5.453661221882235 0.28489074208564213 FHS(ph)PHQEPTVVNQIVPLSGER ddPTM_A549_PD325901_60min_R1 1 FHSPHQEPTVVNQIVPLSGER 21 0 D6RAF2;Q6PIY7-2;Q6PIY7 D6RAF2 PAPD4 Poly(A) RNA polymerase GLD2 1 FHS(0.97)PHQEPT(0.03)VVNQIVPLSGER 51.398 0.013489 3339000.0 398.01 621.96 505.65 713.1 727.81 531.98 598.02 570.07 637.0 714.0 810.18 True False 438.41568220052403 674.3747519688102 539.966449720462 757.1465674323962 676.6911364081935 527.647731257407 620.7779783491006 558.6995066387367 610.2291052271703 668.9179181479973 710.5329961541688 0.61702367739921 0.9491110977518725 0.7599456360831723 1.0656036686973414 0.9523711637191408 0.7426083434736365 0.8736793107556212 0.7863104312716706 0.8588328881700028 0.9414311816180004 1.0 9.472757837529414 -10.44918047299415 0.8041510316032899 0.9996884365223214 0.8519172108072105 0.13911704032730965 0.11627058132928274 0.8266800275868276 0.9713720217000831 0.07125932846900399 0.02121536798908508 3.5548356510245266e-11 10.44918047299415 -0.14777122571511092 FHS(ph)PKKNPEDQTMPQNR ddPTM_A549_PD325901_60min_R1 1 FHSPKKNPEDQTMPQNR 17 2 E9PNQ0;E9PR18;Q96PZ2 E9PNQ0 FAM111A Protein FAM111A 1 FHS(1)PKKNPEDQTMPQNR 54.271 0.0026611 3757000.0 920.27 773.9 798.28 929.57 1037.9 1146.1 939.64 865.99 740.07 983.99 1295.5 True False 1013.6951329330332 839.1192690022865 852.4560812476029 986.9874276933557 965.0014845606187 1136.766541588244 975.3985143907372 848.7171500939877 708.9674315627506 921.8607034712165 1136.1617128511257 0.8922102562224435 0.7385561927593652 0.750294673377453 0.8687032985969695 0.8493522300967251 1.000532343882281 0.8585032424152338 0.7470038292033147 0.6240022204089608 0.8113815956338343 1.0 10.149952476656368 -11.167191148287776 1.5821328742039122 0.9994681496578957 0.7891145867485533 0.0 0.11085181316585767 0.3877173628682972 1.7492209303171977 0.08364521663535564 0.01791424325724769 6.8046979406657574e-12 11.167191148287776 -0.21035356290934237 FHS(ph)PSTTWS(ph)PNKDTPQEK ddPTM_A549_MK2206_60min_R1 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 2 FHS(0.907)PS(0.101)T(0.203)T(0.024)WS(0.743)PNKDT(0.022)PQEK 95.99600000000001 7.3337e-06 20663000.0 2896.7 2997.9 2768.0 1852.8 3760.7 3549.1 2715.6 3040.4 4566.1 4722.5 5091.5 True False 3385.59214248447 3150.480304933793 3160.5440221040653 2306.736083175352 3207.5060117691646 3924.6634062980875 3208.9893687042413 3471.3860108344916 3531.885640563376 3655.6839700813084 3827.1400317486473 0.8846271927336741 0.8231944164045433 0.8258239823694119 0.6027310378087702 0.8380947614042835 1.025482050236056 0.8384823502886126 0.9070444201249649 0.9228524724112676 0.9551999508131404 1.0 11.90205097359987 -7.011964863145538 24.760938790853352 0.9506694975772375 0.7811858901102748 0.4646429530416658 0.07955406666942477 329.2593026564795 681394.6714281702 0.01190218073631746 0.02137102018403793 9.728259276558749e-08 7.011964863145538 -0.16948360746696267 FHS(ph)PSTTWSPNKDTPQEK ddPTM_A549_MK2206_60min_R1 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.528)PS(0.4)T(0.061)T(0.01)WSPNKDTPQEK 72.145 0.00034997 5756700.0 1924.6 1584.8 1603.4 1472.8 2399.0 1811.6 1841.7 1802.6 2795.6 3002.5 2957.8 True False 2249.425428047643 1665.459550771899 1830.7862301451066 1833.6360661165043 2046.1102779360835 2003.3023095572453 2176.3130506490634 2058.1240702309733 2162.4010636558514 2324.233164673187 2223.2966288728567 1.0117522776023067 0.7490946233369841 0.8234556767502765 0.8247374832057842 0.9203046734134612 0.9010503967582851 0.9788676069519286 0.9257082674003689 0.9726102381363851 1.0453994912282585 1.0 11.118484728058343 -7.539020636651042 0.8628270904507473 0.9864209330416664 0.8437326529408311 0.43551135577815114 0.06591835611430458 0.3504828395076965 0.5226954053580288 0.010881394986289006 0.02227016158079014 2.8905425273282673e-08 7.539020636651042 -0.14268828010083534 FHS(ph)PSTTWSPNKDTPQEK ddPTM_A549_PD325901_60min_R1 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.803)PS(0.186)T(0.009)T(0.002)WSPNKDTPQEK 92.098 2.0399e-06 8576000.0 2544.4 2610.4 3016.5 2663.3 3742.4 3261.5 3055.5 2907.7 3666.8 3551.0 4381.2 True False 2802.7056149117184 2830.3875691995954 3221.2178296880716 2827.8059922068414 3479.5467345791108 3234.9394253468768 3171.7787245337568 2849.7036424534776 3512.6971476404838 3326.789253982547 3842.3401747150533 0.7294267262839543 0.736631178005861 0.8383479034172074 0.7359593017858057 0.9055800830641323 0.8419190592844318 0.8254809778181534 0.7416583417590845 0.9142077452580013 0.8658237175029045 1.0 11.907769535744952 -9.689269745423802 0.12988028733513626 1.191260032423678 0.6399807741243486 0.30587040962411016 0.07046985246184526 4.229633614618893 0.25011169795223737 0.6445761208575816 0.36076408755786354 2.0451739604864882e-10 9.689269745423802 -0.5512792582993293 FHS(ph)S(ph)DSEEEEHKK ddPTM_A549_MK2206_60min_R1 1 FHSSDSEEEEHKK 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 FHS(0.667)S(0.667)DS(0.667)EEEEHKK 53.251999999999995 0.0079223 4628700.0 1288.2 1696.1 1134.3 959.68 1713.3 1029.2 1045.4 1151.2 1962.2 1927.1 2227.7 True False 1505.6166665338126 1782.4242453711615 1295.1607963412707 1194.801643081672 1461.2758395947865 1138.109260872331 1235.3356481232183 1314.3861254021408 1517.764832989523 1491.766771570923 1674.5006086077694 0.8991436962125848 1.0644512377055049 0.773460928997874 0.7135271476999141 0.8726636658613911 0.6796708553116559 0.73773377075707 0.7849421604540122 0.9063984958783853 0.8908726362370349 1.0 10.70951518506339 -9.201850805499136 1.5477625629875875 0.9712883519751704 0.815161583674323 0.1803509323430491 0.10449284715898649 0.3284365342021791 1.6258463765257598 0.023518760501829168 0.021305013101851705 6.282741546710082e-10 9.201850805499136 -0.15612676830084737 FHS(ph)S(ph)DSEEEEHKK ddPTM_A549_PD325901_60min_R1 1 FHSSDSEEEEHKK 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 FHS(0.667)S(0.667)DS(0.667)EEEEHKK 58.674 0.0038872 6335700.0 984.37 1486.3 1783.9 1421.2 1400.6 1462.0 1388.9 1754.8 1527.5 1486.2 1570.8 True False 1084.3025177451066 1611.5557171703028 1904.966181462142 1508.9842962206144 1302.2266878076912 1450.0939567245548 1441.7553495352424 1719.7991373860314 1463.3044870243373 1392.3610783635206 1377.6015581216132 0.7870944333306173 1.1698271591443978 1.3828136083553804 1.095370636977316 0.9452854347691817 1.0526221810476075 1.046569191966583 1.248400981580633 1.0622116956804126 1.0107139253399455 1.0 10.42794296425531 -9.631320567944565 1.4266756138292995 1.0144694913162868 1.096359928999708 0.04179443958402618 0.1461234755833289 0.8909430827151054 3.6776593412070366 0.03673626215666325 0.027420162777091726 2.337111498096402e-10 9.631320567944565 0.08189043768342108 FHSPS(ph)TTWS(ph)PNKDTPQEK ddPTM_A549_MK2206_60min_R1 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 2 FHS(0.29)PS(0.706)T(0.005)T(0.01)WS(0.99)PNKDT(0.001)PQEK 122.19 6.6972e-10 13644000.0 2898.4 2445.5 2253.0 1955.6 3297.0 3062.4 2933.3 3409.2 4151.9 4311.0 4205.8 True False 3387.5790609234587 2569.965504424961 2572.509278107101 2434.72208779022 2812.0156675094913 3386.4611353434025 3466.242640749798 3892.464540237124 3211.5012792218945 3337.1421058804676 3161.383785825096 1.0715494512600998 0.812924237780963 0.8137288770954131 0.7701444217898957 0.8894888624778525 1.0711958321945918 1.0964320928991973 1.2312534016559529 1.0158530241160575 1.0555953759374077 1.0 11.626340470900093 -7.176767061947032 5.09446593524744 1.0376026432118206 0.8567506051838759 0.5099909762171281 0.09634228576183042 0.16968924103468586 7.553616446193497 0.014833672666602415 0.02595817427008352 6.656300776150447e-08 7.176767061947032 -0.1808520380279447 FHSPS(ph)TTWSPNKDTPQEK ddPTM_A549_MK2206_60min_R1 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.091)PS(0.786)T(0.107)T(0.015)WSPNKDTPQEK 89.98200000000001 2.5699e-06 5112200.0 1496.0 2052.9 2069.0 1390.2 2212.2 2212.2 1825.2 1918.5 2974.1 2971.2 3420.9 True False 1748.488226311585 2157.3838413551425 2362.415311319835 1730.7990624084493 1886.7883104836205 2446.293535660487 2156.815214228523 2190.4532501598383 2300.471098661778 2300.00385641198 2571.3961179630664 0.679976225404218 0.8389931937301499 0.9187286605967283 0.6730970192875235 0.7337602702683713 0.9513483817492578 0.8387720581677809 0.8518536816859659 0.8946389405316898 0.89445723291903 1.0 11.328336155977661 -9.370837922117135 0.18101510550984676 1.0935874258269935 0.7152990710708251 0.32868337813131043 0.0837485472462956 2.6502840203349476 0.29883494181748643 0.3397471972028481 0.20259523315596673 4.2575727530180573e-10 9.370837922117135 -0.3782883547561684 FHSPS(ph)TTWSPNKDTPQEK ddPTM_A549_PD325901_60min_R1 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.261)PS(0.71)T(0.026)T(0.003)WSPNKDTPQEK 114.72 2.4317e-10 14528000.0 2451.9 2484.7 3022.7 2821.6 3178.9 3506.2 2743.5 2898.0 3911.0 3538.9 4381.5 True False 2700.8150830066215 2694.094389055409 3227.838598971702 2995.8838236814563 2955.6250306096454 3477.6466696769053 2847.905393800806 2840.197116562981 3746.634270868861 3315.45325004755 3842.6032766169133 0.7028607661482194 0.7011117711395205 0.8400134925751536 0.7796495261199793 0.769172568137667 0.9050236049188712 0.7411395839718706 0.7391335800513693 0.9750250028848816 0.8628143504230095 1.0 11.90786832002661 -8.770443007048097 22.999546773380498 0.9882063264984245 0.7756808385906805 0.5452083809445216 0.06765853200837277 24.890224281717153 63581.15889270431 0.009803557422747144 0.010521793438445701 1.696512222853958e-09 8.770443007048097 -0.21252548790774406 FHSPSTTWS(ph)PNKDTPQEK ddPTM_A549_PD325901_60min_R1 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 FHSPS(0.003)T(0.027)T(0.001)WS(0.969)PNKDTPQEK 106.49 1.9708e-09 10252000.0 2992.5 3146.0 2951.8 3727.7 4064.8 3310.2 3422.7 3108.6 3792.8 3024.9 4086.0 True False 3296.296397037935 3411.1244608879615 3152.126898615367 3957.9515627790506 3779.3024707987306 3283.2428286933127 3552.952721473304 3046.5965343504777 3633.4018058172887 2833.9072977673377 3583.447903288077 0.9198672580152039 0.9519112745459488 0.8796351959583557 1.1045093076830665 1.054655341111822 0.9162245182023424 0.9914899887935327 0.8501858033306418 1.013940178252173 0.7908325652417101 1.0 11.807132665209503 -6.213869967917023 24.999810251535767 0.9966907037252524 0.9206152540798607 0.0 0.08959289427939376 486.669520668365 255765.40011221543 0.008914019127038101 0.0235841923649747 6.111249744051541e-07 6.213869967917023 -0.0760754496453917 FHSS(ph)DS(ph)EEEEHKK ddPTM_A549_PD325901_60min_R1 1 FHSSDSEEEEHKK 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 FHS(0.444)S(0.561)DS(0.995)EEEEHKK 98.439 5.6783e-05 9908200.0 1165.5 1425.1 1399.0 1515.3 1445.0 1088.3 1096.8 1534.0 1453.9 1328.8 1512.0 True False 1283.8207020042487 1545.1981783888855 1493.9445528704175 1608.8966395040095 1343.5081849793767 1079.4372456247145 1138.5393241919887 1503.40316660028 1392.7976390734425 1244.8993412255727 1326.0335853577012 0.9681660526403142 1.1652783122925683 1.1266264816870546 1.2133151507395683 1.0131780973081173 0.8140346198950408 0.8586051942906594 1.1337594938779267 1.0503486898468952 0.9388143369609735 1.0 10.372901600697347 -6.886112625245972 9.518171729610211 1.0029412192659317 1.122090846322808 0.2949011696349906 0.10176167031763134 0.33691259854927386 26.86615514746555 0.015044799194217126 0.028470234985691817 1.2998324497960307e-07 6.886112625245972 0.11914962705687637 FHT(ph)ITTSYYR ddPTM_A549_MK2206_60min_R1 2 FHTITTSYYR 10 0 P61026 P61026 RAB10 Ras-related protein Rab-10 1 FHT(1)ITTSYYR;FHT(1)ITTSYYR 142.19 4.3635e-08 26497000.0 1932.8200000000002 1731.27 1574.22 890.1700000000001 1991.11 1709.33 1314.33 1289.33 2870.9 2262.9900000000002 3950.9 True False 2259.0327630879387 1819.3842481479462 1797.468067368734 1108.2616899612503 1698.220356607468 1890.210166038576 1553.1267480369138 1472.0964759075243 2220.6457338852406 1751.7789872851877 2969.782490707205 0.7606728001652361 0.6126321553315811 0.6052524294264717 0.3731794141251523 0.5718332443272857 0.6364810123142902 0.522976599430035 0.4956916812978343 0.7477469278756608 0.5898677740766228 1.0 11.536141555395451 -9.53793027266306 0.8146059487073738 0.9636578835458312 0.5671135896225602 0.08597185278446318 0.14956810518139566 0.20846297773237144 0.2956172201391323 0.0352418362317514 0.02280355313489247 2.897808802618057e-10 9.53793027266306 -0.39654429392327095 FHT(ph)ITTSYYR ddPTM_A549_PD325901_60min_R1 4 FHTITTSYYR 10 0 P61026 P61026 RAB10 Ras-related protein Rab-10 1 FHT(0.972)IT(0.028)TSYYR;FHT(0.987)IT(0.006)T(0.006)S(0.001)YYR;FHT(0.996)IT(0.004)TSYYR;FHT(0.745)IT(0.061)T(0.156)S(0.038)YYR 139.76 1.2972000000000003e-07 58320000.0 11065.3 11429.2 10675.9 11566.8 13280.5 11551.1 11824.0 11080.5 13564.900000000001 13891.2 16573.2 True False 12188.641110156674 12392.378794780883 11400.430773401918 12281.254965891223 12347.723495237782 11457.031671355004 12273.968790341065 10859.490735015906 12994.814426210434 13014.107261312984 14534.801466170811 0.8385832540282896 0.8526004860557378 0.7843540759697324 0.8449551233620473 0.8495281840606238 0.7882482397864741 0.8444538316473227 0.7471371907136779 0.8940482920565075 0.8953756466232315 1.0 13.827223745091231 -9.564579505593821 0.9178278009918848 0.9823870298603777 0.8209270498168465 0.5015420138441676 0.04535002979892129 0.16545350929184505 0.29385577571757476 0.01171603074708573 0.007869734714852094 2.725338769862375e-10 9.564579505593821 -0.16145998004353124 FHTITT(ph)SYYR ddPTM_A549_PD325901_60min_R1 2 FHTITTSYYR 10 0 P61026 P61026 RAB10 Ras-related protein Rab-10 1 FHTIT(0.02)T(0.49)S(0.49)YYR;FHTIT(0.013)T(0.628)S(0.359)YYR 81.92 0.00096503 9593800.0 2177.6499999999996 1855.29 1745.63 2085.7 2008.15 1999.9900000000002 1811.0300000000002 1776.81 2036.06 2017.52 3068.7 True False 2398.7234248987984 2011.6417994408207 1864.098949125938 2214.528952031618 1867.1044717414081 1983.702744534572 1879.949737683643 1741.3701306695207 1950.491478789375 1890.1334428878818 2691.269354092049 0.89129816056931 0.7474695152241595 0.69264674169146 0.8228566749234698 0.6937635093650116 0.7370881482072283 0.6985364489158982 0.6470441645024435 0.7247477759235327 0.7023204273529708 1.0 11.394071074141348 -10.583639575552716 0.8669264192835154 1.0006286796701884 0.7362585029202788 0.0 0.10733971868500505 0.2658773561962343 0.3561787460988884 0.044105389348725814 0.012085400924283602 2.608317315312467e-11 10.583639575552716 -0.2643701767499096 FHVEEEGKGK ddPTM_A549_MK2206_60min_R1 2 FHVEEEGKGK 10 1 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ; 136.63 1.8102e-06 14966900.0 5411.4 5411.2 5749.700000000001 4429.4 7587.1 5424.3 5659.1 4359.9 8791.2 8228.8 8322.5 False True 6324.712023972264 5686.606966896072 6565.093917590947 5514.603198843323 6471.047640570596 5998.295825641068 6687.285217423101 4977.929176633768 6800.007236661654 6369.908364850195 6255.793560685084 1.011016741939872 0.9090144858094262 1.0494422256593758 0.8815193700604481 1.0344087569062843 0.9588385178401224 1.0689747275948733 0.7957310496813493 1.0869935477725343 1.0182414593861076 1.0 12.61097718958837 FHVEEEGKGK ddPTM_A549_PD325901_60min_R1 4 FHVEEEGKGK 10 1 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ;;; 138.66 9.7414e-07 28706500.0 8725.7 8788.5 8809.4 9417.1 10815.9 11349.099999999999 9868.7 9675.3 10197.3 9887.099999999999 11234.7 False True 9611.526640479164 9529.137738243437 9407.258859225623 9998.772879214153 10056.228496829366 11256.676692382116 10244.258778859852 9482.318551373983 9768.742943065974 9262.826818656953 9852.903122631069 0.975501993762885 0.9671401027333784 0.9547702582823687 1.014804748891526 1.020636087827889 1.1424730916643977 1.0397198319477923 0.962388286310672 0.9914583368457376 0.9401114274006436 1.0 13.26633315679714 -6.266523614229162 24.321191900763694 1.0098488131424785 0.965937716156537 0.15720707495278607 0.048981490715431286 444.6823916051057 2127215.612248328 0.006796927083878724 0.016284360140551245 5.413478119598951e-07 6.266523614229162 -0.04391109698594153 FIDTTSK ddPTM_A549_MK2206_60min_R1 1 FIDTTSK 7 0 P39023;G5E9G0;Q92901 P39023 RPL3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like 0 86.95299999999999 0.035931 5261200.0 4340.5 5832.2 4964.0 4755.5 5743.7 3848.6 4806.1 4541.4 6609.4 6381.1 6671.7 False True 5073.070284963522 6129.0340686596855 5667.969843108588 5920.597713482509 4898.809338633384 4255.856297506077 5679.306158833941 5185.157357454203 5112.381453042989 4939.605078133579 5014.9327604473065 1.0115928821568148 1.2221567788504122 1.1302185121626704 1.1805936382992346 0.976844470831237 0.8486367616076423 1.1324790241708795 1.0339435452354326 1.0194317047208008 0.9849793235698321 1.0 12.292014642165636 -6.763760836739907 24.999949217677223 1.0065488699049223 1.1418614881962124 0.40846681419856745 0.078713842740488 44.2600215257786 476646.64811668906 0.01061398990078003 0.020760097318272788 1.722817058399433e-07 6.763760836739907 0.13531261829129004 FIDTTSK ddPTM_A549_PD325901_60min_R1 2 FIDTTSK 7 0 P39023;G5E9G0;Q92901 P39023 RPL3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like 0 ; 111.82 0.022169 17549100.0 14812.8 13731.0 14044.6 14007.8 16296.699999999999 16179.8 14463.1 15821.4 17062.2 15405.7 16908.1 False True 16316.584551392985 14888.159558948691 14997.75101304064 14873.029991978006 15152.07601256291 16048.037073195592 15013.501185011999 15505.829765351802 16345.13506939879 14432.981472846792 14828.510889276817 1.100352198088364 1.0040225664004474 1.0114131570612535 1.0030022638843246 1.0218204731211464 1.0822419859300012 1.0124753117232397 1.0456767966205418 1.1022775780687941 0.9733264237128456 1.0 13.856086106099772 FIEFEDS(ph)QEQEKK ddPTM_A549_MK2206_60min_R1 2 FIEFEDSQEQEKK 13 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 FIEFEDS(1)QEQEKK;FIEFEDS(1)QEQEKK 132.44 1.4377e-08 13118600.0 3347.6 4399.6 4073.0 3270.8999999999996 4949.7 3871.2999999999997 3683.6 3443.4 5988.1 5103.700000000001 5517.0 True False 3912.5930390378726 4623.520847789026 4650.612645241998 4072.270646836279 4221.605686827943 4280.95839643904 4352.862438709288 3931.51249497023 4631.804911030765 3950.770625326408 4146.976638546064 0.943480848835848 1.1149136469237597 1.1214465502444955 0.9819854322266022 1.0179960136713102 1.0323082982063652 1.0496472052071668 0.9480430775584556 1.1169112620452768 0.9526869740726472 1.0 12.017844204693839 FIEFEDS(ph)QEQEKK ddPTM_A549_PD325901_60min_R1 2 FIEFEDSQEQEKK 13 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 FIEFEDS(1)QEQEKK;FIEFEDS(1)QEQEKK 127.75 2.2673e-08 19672100.0 5099.5 5853.3 5983.4 5905.4 7205.1 6052.5 6418.4 6568.3 6901.5 6074.2 7114.5 True False 5617.197485946514 6346.578133158133 6389.469505107113 6270.163145863508 6699.038632245612 6003.21044669998 6662.655724283246 6437.290103768329 6611.453955612739 5690.673975370546 6239.461602531325 0.9002695815401185 1.0171675919254557 1.024041802343159 1.004920543676353 1.0736565202240909 0.9621359708767983 1.0678254228826782 1.0317060211023248 1.0596193031992533 0.912045676034269 1.0 12.607205830276957 -5.25280797526723 3.6497598836718446 1.0283204810375135 0.8848447446023182 0.3046355893765663 0.046591135103548856 0.1560421697432149 3.7271514227395737 0.004256087912159243 0.061266199579398606 5.587171787675923e-06 5.25280797526723 -0.1434757364351953 FIEIAAR ddPTM_A549_PD325901_60min_R1 2 FIEIAAR 7 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4;A0A1W2PPE9 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 114.72 0.020347999999999998 9801700.0 2661.44 2182.53 2282.3 2270.11 3037.5 2568.2 2684.1 2660.3 2357.3 2585.1 2726.5 False True 2931.627429551426 2366.4594626897 2437.1906025848125 2410.3295389061236 2824.1564788061282 2547.285430683996 2786.2448942958786 2607.2382295350217 2258.2308787315687 2421.8763448240747 2391.157784707522 1.2260284320426025 0.9896709777264477 1.0192512673867404 1.008017770437908 1.1810832797684112 1.065293744718553 1.165228372680008 1.0903664518541716 0.9444089775981838 1.0128467306979954 1.0 11.223493616595547 -8.752858963998902 24.91312227137874 0.9737486835709526 1.0887788913429697 0.2974982360938909 0.0726220430589398 143.5092276145501 416676.718444803 0.011996566911697315 0.013496994093496192 1.7666114299996389e-09 8.752858963998902 0.11503020777201711 FIGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 FIGSPR 6 0 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 FIGS(1)PR;FIGS(1)PR 79.469 0.043426 130759000.0 2605.9 2588.7 2429.5 2563.3999999999996 4205.0 3290.0 2686.8 3395.0 4844.5 4461.6 4417.7 True False 3045.7122118618686 2720.4537727683064 2774.0396321177104 3191.4331150753987 3586.4500703298186 3638.145616274747 3174.956781497477 3876.251646751447 3747.228485076821 3453.7214612842276 3320.6631676826096 0.9171999862868895 0.8192501423343184 0.8353872380418604 0.961083058991076 1.0800403079824243 1.0956081458914422 0.9561212990214794 1.1673125068739103 1.128457869965745 1.0400697953639408 1.0 11.697255674783912 -6.519560133035886 3.0721913045679874 1.06583440315025 0.8545523988878616 0.7086745388526284 0.05906151522375683 0.11628475141295912 2.2381588212415116 0.009622300679540079 0.02292425382638556 3.0230119709655244e-07 6.519560133035886 -0.2112820042623884 FIGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 FIGSPR 6 0 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 FIGS(1)PR;FIGS(1)PR 76.035 0.045443 235100000.0 4230.0 4336.2 3973.5 4266.5 5164.0 4651.8 4523.7 4689.5 4591.7 4800.200000000001 4921.200000000001 True False 4659.426486038582 4701.626791895223 4243.165604596568 4530.032015075469 4801.298454832871 4613.917283099376 4695.851878963623 4595.964243658421 4398.726817066874 4497.114552792744 4315.92359805709 1.079589659125599 1.0893674749042743 0.9831419644468972 1.0496089451432282 1.1124614108077084 1.0690451715077705 1.0880294269058808 1.0648854501797478 1.0191855154820302 1.0419819653010587 1.0 12.075453610637284 -8.833156851515579 3.1528161560433015 1.0079556863694128 1.0669602808936325 0.2718007129652804 0.03268529979378784 0.18139525906710335 3.480073542031378 0.005817135343304966 0.006184940410725537 1.4683958502015605e-09 8.833156851515579 0.05900459452421969 FIHQQPQSS(ph)SPVYGSSAK ddPTM_A549_MK2206_60min_R1 2 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 FIHQQPQS(0.068)S(0.466)S(0.466)PVYGSSAK;FIHQQPQS(0.076)S(0.592)S(0.331)PVYGSSAK 161.04 2.5356e-23 195218000.0 12706.3 15299.2 15426.9 13699.8 19356.9 14888.3 14156.3 16169.3 23979.0 22851.8 24710.0 True False 14850.812800790705 16077.86393183331 17614.666392556777 17056.25161500739 16509.525651930373 16463.770023946305 16728.316467884742 18461.34779140447 18547.794786594517 17689.562508735624 18573.825038693714 0.7995559756729115 0.8656194347873569 0.9483596596749038 0.918295051206477 0.8888597592330653 0.8863963125338125 0.9006392831328853 0.993944314267259 0.9985985518844411 0.9523920071328356 1.0 14.180983329776891 -8.24336405423223 3.9175411122850394 0.9993501664053702 0.8886284022538442 0.6192563251552017 0.03708930882754104 0.09524849004559689 3.3415466092745003 0.005727492574765099 0.007282596577315009 5.70999786377747e-09 8.24336405423223 -0.11072176415152601 FIHQQPQSS(ph)SPVYGSSAK ddPTM_A549_PD325901_60min_R1 3 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 FIHQQPQS(0.002)S(0.58)S(0.418)PVYGSSAK;FIHQQPQS(0.121)S(0.459)S(0.42)PVYGSSAK;FIHQQPQS(0.016)S(0.914)S(0.07)PVYGSSAK 158.52 3.5345e-23 247330000.0 21055.7 21784.8 23309.2 25994.4 29445.2 28330.1 25611.0 27412.8 28060.4 28779.5 29702.1 True False 23193.259163612904 23620.681549762234 24891.102481606238 27600.01505043426 27377.07073242541 28099.389058414716 26585.640619876936 26866.030199074426 26881.118970669548 26962.357458459795 26048.929997124993 0.890372816318088 0.9067812594363468 0.9555518205298051 1.0595450582223707 1.0509863835269626 1.0787156732163674 1.0206039412294932 1.0313678988749102 1.0319471461452123 1.035065834237169 1.0 14.66893649218583 -5.990951410125782 3.1206843786464264 1.026337397872876 0.89886119112831 0.851952670792062 0.022717677837760845 0.08341648151366293 1.663023439342677 0.003828864657908871 0.013109238687509907 1.021053715175864e-06 5.990951410125782 -0.12747620674456606 FIHQQPQSSS(ph)PVYGSSAK ddPTM_A549_PD325901_60min_R1 1 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 FIHQQPQS(0.044)S(0.418)S(0.538)PVYGSSAK 122.35 6.857499999999999e-11 94898000.0 6996.6 6832.5 8241.8 7562.6 10085.0 8475.9 7705.6 8118.3 9353.2 10276.0 9225.2 True False 7706.889681375312 7408.298753660834 8801.138109969546 8029.724626089239 9376.664391361253 8406.875080575692 7998.840824666114 7956.374137816855 8960.117530629159 9627.171606286869 8090.558883361031 0.9525781583797913 0.9156720642496866 1.0878282003570712 0.9924808337534131 1.1589637411384788 1.039096952605486 0.9886635694743482 0.9834146506466768 1.1074781927681725 1.189926647229034 1.0 12.98202364991361 -5.754636437369693 24.980858830099304 1.0474761850980814 0.9341250707305638 0.3237248291822137 0.06845215393332635 123.88202570392465 454890.0203737407 0.007859146336924954 0.029108161580824226 1.7593958475394292e-06 5.754636437369693 -0.11335111436751755 FIHQQPQSSSPVY(ph)GSSAK ddPTM_A549_MK2206_60min_R1 2 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 FIHQQPQS(0.003)S(0.003)S(0.072)PVY(0.865)GS(0.045)S(0.012)AK;FIHQQPQS(0.006)S(0.004)S(0.012)PVY(0.911)GS(0.055)S(0.013)AK 93.152 1.7456999999999999e-06 9118400.0 1856.96 2519.6000000000004 2229.7 2697.6 3108.3999999999996 2684.1 2097.23 1618.6399999999999 3410.3 3328.8999999999996 4290.1 True False 2170.3694496868725 2647.836877918273 2545.9049877476245 3358.512121099864 2651.158477672579 2968.1296804386193 2478.2695440151683 1848.0871768771021 2637.872495130043 2576.899177978542 3224.749769263453 0.673034996505355 0.8210984006126623 0.7894891603726265 1.0414799167089988 0.8221284339460905 0.9204217048805474 0.7685153023768464 0.5730947543564638 0.8180084297618369 0.7991005077479599 1.0 11.654971500810742 -10.383884785572157 1.0031610182543402 0.9885904233079499 0.8098745458603189 0.0 0.12748416763352768 0.5186018595983357 1.0119608528579622 0.05589589884724195 0.021625845051342175 4.131570943212336e-11 10.383884785572157 -0.17871587744763096 FIHQQPQSSSPVY(ph)GSSAK ddPTM_A549_PD325901_60min_R1 2 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 FIHQQPQSSS(0.015)PVY(0.982)GS(0.002)S(0.001)AK;FIHQQPQS(0.009)S(0.013)S(0.02)PVY(0.857)GS(0.078)S(0.023)AK 150.59 1.4245e-17 32494000.0 3702.2 3851.6000000000004 3783.9 4556.7 6089.299999999999 5158.4 4941.1 6074.799999999999 4999.9 5091.7 5915.4 True False 4078.0446185844057 4176.187849191377 4040.6982084391493 4838.157009983448 5661.6085749445765 5116.391700662072 5129.136264373669 5953.633348411594 4789.771590620613 4770.209193045043 5187.843300810154 0.7860770617238116 0.804994986748965 0.7788782301516582 0.9325950552955026 1.0913222020527178 0.9862271090306596 0.9886837298213467 1.1476124090875781 0.923268362765048 0.9194975477189353 1.0 12.340919188199601 -6.370728386115672 4.042501335980791 0.9887566369281691 0.7914932935032659 0.6779543617853574 0.06463801874228409 0.11264172855624802 3.1921790163404524 0.009443379802007719 0.023037565436870185 4.258646716264393e-07 6.370728386115672 -0.19726334342490315 FIIPNVVK ddPTM_A549_PD325901_60min_R1 1 FIIPNVVK 8 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2 P00338 LDHA L-lactate dehydrogenase A chain 0 124.89 0.0030704 25656000.0 13153.0 12439.0 13544.0 12904.0 16376.0 15306.0 14594.0 15645.0 16301.0 16541.0 15806.0 False True 14488.282877273172 13487.278184674293 14463.177286688298 13701.050772889685 15225.806254133056 15181.353010688132 15149.38265614323 15332.948201734924 15615.925658254482 15496.598437095285 13861.962202489309 1.0451826852241302 0.9729703477515087 1.0433715714569634 0.9883918721426951 1.0983875177064637 1.0951806669882485 1.0928743301163186 1.1061167227091022 1.1265306765481007 1.117922427628062 1.0 13.75884386930688 -6.759816444917294 24.999612702306415 1.072103877471444 1.0118636658707192 0.43353369794788765 0.03958737793939009 50.46428239002123 777326.3105459951 0.007475884160505805 0.014947009969928314 1.738535467587167e-07 6.759816444917294 -0.06024021160072479 FIIPQIVK ddPTM_A549_PD325901_60min_R1 1 FIIPQIVK 8 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 95.62 0.006939699999999999 30708000.0 2614.4 3045.5 2484.6 2552.7 3145.5 3288.7 2603.4 2903.7 2779.2 2767.3 3671.1 False True 2879.8119633804436 3302.1549731831806 2653.219897113536 2710.374481397667 2924.5709313859 3261.9179175650083 2702.473811635144 2845.7834255914167 2662.399888928339 2592.5722057296266 3219.5779730202753 0.8944687743278669 1.025648392694599 0.8240893431832493 0.8418415407579254 0.9083708970223727 1.0131507746976582 0.839387594983439 0.8838995201976105 0.8269406460222333 0.8052521875398294 1.0 11.652655874823747 -11.047242548868727 1.3697063444687634 0.9995935521220316 0.8890618505727348 0.0 0.0869075054928584 0.47219275901129004 1.5890960813977404 0.04744079174921184 0.010758941859050233 8.969277299559259e-12 11.047242548868727 -0.11053170154929681 FILPEGASQGMT(ph)PFR ddPTM_A549_PD325901_60min_R1 1 FILPEGASQGMTPFR 15 0 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;H0Y7I1;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 FILPEGAS(0.175)QGMT(0.825)PFR 55.196000000000005 0.006854099999999999 3252500.0 1673.1 1616.3 2343.6 1719.1 1916.5 2071.1 1958.4 2290.7 2299.7 1936.4 2101.9 True False 1842.9518803288788 1752.5112734053441 2502.650789211657 1825.2849026406284 1781.891651566072 2054.233648271017 2032.9279836776002 2245.010191480613 2203.051606422173 1814.1353735319076 1843.3796250419 0.999767956254257 0.9507055679675908 1.3576426446368972 0.9901839414109503 0.9666438900373381 1.1143844818314754 1.102826545363054 1.2178772950414831 1.1951155239507965 0.9841355241683721 1.0 10.848137494408045 FIQELSGS(ph)SPKR ddPTM_A549_MK2206_60min_R1 3 FIQELSGSSPKR 12 1 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELS(0.129)GS(0.435)S(0.435)PKR;FIQELS(0.078)GS(0.461)S(0.461)PKR;FIQELS(0.062)GS(0.469)S(0.469)PKR 72.898 0.00069863 38705900.0 3772.3999999999996 4913.0 5324.799999999999 4606.8 5829.7 4580.0 4853.6 4470.799999999999 7076.6 6719.1 7042.400000000001 True False 4409.088893675014 5163.050714880328 6079.936708417525 5735.466206807112 4972.158852556895 5064.652560042055 5735.436293983982 5104.549591250768 5473.761399008078 5201.250643382382 5293.577719647783 0.8329128478288178 0.9753423843607723 1.1485496256815255 1.08347633879431 0.9392813548580007 0.9567541704817059 1.0834706880180838 0.9642910450345494 1.0340381664165468 0.9825586623725732 1.0 12.370027397125009 -5.316745341397256 3.997034577004582 1.0204286716341995 0.8250046187208379 0.44147640187596393 0.06080796881085981 0.13837061594918248 4.052795691052209 0.007976026471743381 0.06819336256639741 4.8223048172153e-06 5.316745341397256 -0.19542405291336162 FIQELSGS(ph)SPKR ddPTM_A549_PD325901_60min_R1 2 FIQELSGSSPKR 12 1 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELS(0.006)GS(0.594)S(0.399)PKR;FIQELS(0.008)GS(0.496)S(0.496)PKR 92.935 0.00011116 14137700.0 2766.7 2514.8 3077.6 3123.3999999999996 3174.7 3116.8999999999996 2921.6000000000004 3491.2 3243.0 3180.8 2905.1000000000004 True False 3047.573347263108 2726.731021691367 3286.4644431122174 3316.3253242439287 2951.720024120433 3091.516999804901 3032.783086760865 3421.565277206583 3106.7079878362842 2979.963745161275 2547.7911169462045 1.1961629534669016 1.0702333498044536 1.2899269572190795 1.3016472591437924 1.1585408256146132 1.2134106988764484 1.1903578227386138 1.3429536096772676 1.2193731138995414 1.169626397290008 1.0 11.315031286393303 -10.511866560027878 0.8515559555180648 1.0012552463152682 1.2197906904714422 0.18705124029380615 0.08544642919298706 0.35143239391823533 0.4621803348175955 0.04666146535399496 0.013667531877255725 3.0770421119003416e-11 10.511866560027878 0.21853544415617399 FIQELSGSS(ph)PK ddPTM_A549_MK2206_60min_R1 4 FIQELSGSSPK 11 0 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.064)S(0.936)PK;FIQELSGS(0.189)S(0.811)PK;FIQELSGS(0.079)S(0.921)PK;FIQELSGS(0.298)S(0.702)PK 215.51 3.8484e-31 94780000.0 28439.5 32492.4 32606.9 28056.799999999996 43093.6 34113.5 30620.0 32556.199999999997 46101.9 45607.0 45621.8 True False 33239.3923209815 34146.12437373854 37231.04872628071 34930.71725951761 36754.58852574673 37723.36792729139 36183.257648300125 37171.141049181 35659.89325960641 35304.34702456288 34292.64796237464 0.9692862551020044 0.9957272594173285 1.0856860271370712 1.0186065916473714 1.0717920810919381 1.1000424338383223 1.0551316331127252 1.0839390731787348 1.0398699248518777 1.0295019230739562 1.0 15.065611688159276 -5.5367995964393915 23.828782283056615 1.0382931897192345 0.975896481629214 0.3590677044635229 0.032369603929323455 113.3608250941751 194044.17782669736 0.005306345486092215 0.02057693037473973 2.905363014060041e-06 5.5367995964393915 -0.0623967080900204 FIQELSGSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 FIQELSGSSPK 11 0 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.064)S(0.936)PK;FIQELSGS(0.06)S(0.94)PK 225.97 1.3504000000000001e-39 153538000.0 12838.5 12534.0 14245.2 13968.0 15097.8 14947.099999999999 14717.599999999999 15071.400000000001 14096.8 14048.8 14225.4 True False 14141.855068795829 13590.284168076822 15211.96493534643 14830.771636370368 14037.382612582438 14825.375773295207 15277.686321779749 14770.789103715426 13504.360518942505 13161.756370416799 12475.76598224038 1.1335460354840878 1.089334649866228 1.2193211187995279 1.1887664178281643 1.1251720040729416 1.1883339102704849 1.2245890427512014 1.1839584939908363 1.082447405487275 1.0549858332669069 1.0 13.60684077586183 -9.189874976740654 1.3220790284960564 1.0234947430145596 1.1694927046157408 0.6194879264202 0.04275281148697053 0.16311766003289607 0.590129608047784 0.010210780109001769 0.009121851232108522 6.458401245953068e-10 9.189874976740654 0.14599796160118128 FIQELSGSS(ph)PKR ddPTM_A549_PD325901_60min_R1 3 FIQELSGSSPKR 12 1 Q01664;I3L254 Q01664 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.022)S(0.978)PKR;FIQELS(0.007)GS(0.335)S(0.658)PKR;FIQELS(0.004)GS(0.05)S(0.946)PKR 145.52 3.1453e-12 59455900.0 7577.0 8045.6 6730.9 8348.3 10112.6 9562.8 8712.4 9571.9 9485.1 8582.8 7972.9 True False 8346.211462107416 8723.630948035654 7187.699350189766 8863.955530635067 9402.325862576085 9484.92372733623 9043.955149608211 9380.980945489711 9086.474232323764 8040.8805432501895 6992.283844377263 1.1936316728358922 1.2476082410542624 1.027947307369343 1.2676767316536899 1.3446716511854448 1.3564843674021307 1.2934193392164375 1.3416190123679377 1.2995001968677962 1.1499648358406014 1.0 12.771548035370696 -10.691166643509446 0.9437665399297327 0.9994107964543972 1.2649530738784374 0.3241929384316773 0.09715451903167449 0.3649221432827918 0.5761833762496169 0.06530365758666405 0.017017148722128735 2.0362605924785853e-11 10.691166643509446 0.26554227742404013 FIQENVFVAANHNGS(ph)PLSIK ddPTM_A549_MK2206_60min_R1 2 FIQENVFVAANHNGSPLSIK 20 0 E9PFD2;P11172-4;P11172-2;P11172-3;P11172 E9PFD2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 FIQENVFVAANHNGS(0.999)PLS(0.001)IK;FIQENVFVAANHNGS(1)PLSIK 177.41 2.5182e-35 41927000.0 7026.0 7910.0 7697.1 6120.799999999999 11792.900000000001 8936.0 8791.4 9444.400000000001 13198.099999999999 10948.5 11280.4 True False 8211.817030792243 8312.585213658323 8788.664520425282 7620.396274773149 10058.180031960163 9881.601588763268 10388.683582275171 10783.17262226196 10208.751423034868 8475.226245936512 8479.165356798083 0.968469971423367 0.9803541815579518 1.0365011355013924 0.898720092616613 1.18622288972064 1.165397910401735 1.2252012014302978 1.2717257145618304 1.2039806977994723 0.9995354364851001 1.0 13.049706545338454 -6.7667640012177666 24.99996504736789 1.1323003971316408 0.9763565295483585 0.4918652189573882 0.08637343220692356 116.25267904221306 545828.5223939886 0.015119679901542166 0.029181613359636257 1.7109448023800954e-07 6.7667640012177666 -0.15594386758328227 FIQENVFVAANHNGS(ph)PLSIK ddPTM_A549_PD325901_60min_R1 2 FIQENVFVAANHNGSPLSIK 20 0 E9PFD2;P11172-4;P11172-2;P11172-3;P11172 E9PFD2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 FIQENVFVAANHNGS(1)PLSIK;FIQENVFVAANHNGS(0.998)PLS(0.002)IK 223.85 1.8473999999999997e-75 81341000.0 14323.3 14698.0 15283.5 15118.5 17182.0 15792.0 16060.0 15874.0 17722.1 17232.8 16500.7 True False 15777.390871743843 15936.652042635485 16320.730217151555 16052.335408395285 15975.195594682098 15663.39518782091 16671.172088369218 15557.380617087902 16977.301767262852 16144.718067031947 14471.218506555451 1.0902600126310509 1.1012653865613455 1.1278062182364448 1.10925941731331 1.103928849353311 1.0823826052191392 1.1520226911657225 1.0750567141281449 1.1731770727926019 1.115643306727654 1.0 13.820898784442718 -10.992885808784363 1.257851174936312 0.9997576277619241 1.1180140988595975 0.0 0.043550882010482087 0.2157971638307047 0.6055321577931041 0.021876065689438454 0.004959241260122068 1.0165159353436423e-11 10.992885808784363 0.11825647109767334 FIQENVFVAANHNGS(ph)PLSIKEAPK ddPTM_A549_MK2206_60min_R1 2 FIQENVFVAANHNGSPLSIKEAPK 24 1 E9PFD2;P11172-4;P11172-2;P11172-3;P11172 E9PFD2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 FIQENVFVAANHNGS(0.998)PLS(0.002)IKEAPK;FIQENVFVAANHNGS(0.998)PLS(0.002)IKEAPK 111.43 9.7462e-12 4492500.0 1809.27 2497.1 2489.3 2517.7 3080.8 2318.6000000000004 2421.9 2263.4 3935.7 3245.0 3576.3999999999996 True False 2114.630543595427 2624.191724023542 2842.320171323571 3134.5366130238476 2627.6184011110818 2563.952713037883 2861.927880418618 2584.2438813717904 3044.270234021438 2511.9522462496216 2688.2811763813934 0.7866106277029628 0.9761596915825151 1.0573001798679125 1.1660002832155913 0.9774343637104331 0.9537516892072782 1.064593951541544 0.9612996973963698 1.1324225534024046 0.9344083008574563 1.0 11.392468327003488 -5.310400036784541 2.496292046361766 1.0505782684206102 0.7445108596666928 0.4470925100766887 0.07336758695503874 0.2666372134122114 2.217989632055795 0.009897536748397072 0.1643605965192106 4.893278826360907e-06 5.310400036784541 -0.30606740875391736 FIQENVFVAANHNGS(ph)PLSIKEAPK ddPTM_A549_PD325901_60min_R1 1 FIQENVFVAANHNGSPLSIKEAPK 24 1 E9PFD2;P11172-4;P11172-2;P11172-3;P11172 E9PFD2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 FIQENVFVAANHNGS(1)PLSIKEAPK 167.48 3.1892999999999997e-41 4438300.0 1196.7 1517.7 1877.8 1905.0 2006.5 2496.8 1995.7 2503.0 2606.2 2214.3 1968.6 True False 1318.1881030360223 1645.6019053686127 2005.2388001287131 2022.6675234310958 1865.5703620492159 2476.466888611401 2071.6474555889426 2453.075701434486 2496.6704773046345 2074.488720105197 1726.4746799835787 0.7635142978456888 0.9531572773394307 1.1614643547206762 1.1715593323675817 1.0805663029283235 1.434406723320701 1.199929242871171 1.420858197270416 1.4461089445739115 1.2015749458456746 1.0 10.753613460828488 -5.242047554816508 0.9280878387700046 1.239506997109612 0.4730167015091691 0.5664166765957519 0.13466429442756297 1.6478066380763856 1.0302239986192547 0.027704769307202996 1.281328747852819 5.727333138203896e-06 5.242047554816508 -0.7664902956004429 FISDRES(ph)R ddPTM_A549_MK2206_60min_R1 2 FISDRESR 8 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 FISDRES(1)R;FISDRES(1)R 88.681 0.0007471 28329000.0 2412.55 3088.2 2796.9 2585.3900000000003 4509.2 3956.7 3223.4 4988.5 5311.9 3800.7 3623.3 True False 2819.7294588155182 3245.3761892313078 3193.5424766701053 3218.810666062568 3845.902653301121 4375.395367755104 3809.0500556345755 5695.635151640526 4108.763131361252 2942.119230299212 2723.534612007242 1.0353198547153328 1.1916045329196199 1.1725727525513137 1.1818504717626146 1.4120997898633993 1.6065135902680683 1.3985686243316402 2.0912659330746854 1.5086142519529422 1.0802576979665677 1.0 11.411264486429724 -6.671094807040192 5.346717617755338 1.3609299373008483 1.1457319938023285 0.17502307089863978 0.27700351118682714 0.44375578653244757 20.53608046890895 0.0474435177870694 0.09976359273245912 2.13257931753907e-07 6.671094807040192 -0.21519794349851984 FISDRES(ph)R ddPTM_A549_PD325901_60min_R1 1 FISDRESR 8 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 FISDRES(1)R 96.03399999999999 0.0006957 16724000.0 3408.0 3477.1 3770.5 3922.1 4020.3 3013.0 3265.5 2780.0 3467.2 4284.5 3921.9 True False 3753.977651162999 3770.127419883509 4026.388803858402 4164.359209264617 3737.9279972820686 2988.4631269569645 3389.7703894501656 2724.5507191321904 3321.4856415127847 4013.9759388026578 3439.531162972469 1.0914213226429335 1.0961166627795098 1.170621405383275 1.2107345483870384 1.0867550896244018 0.8688576975631505 0.9855326871121297 0.7921285169510176 0.9656797639368767 1.1670125225246542 1.0 11.747996211522235 -7.0602568478000665 6.3113141856968475 0.9606932245525229 1.1420757074192849 0.4632307470377691 0.09138502915245363 0.11854969172821168 9.776786287608275 0.010379361257030775 0.018221016337980643 8.704486422576253e-08 7.0602568478000665 0.18138248286676195 FISDRES(ph)RR ddPTM_A549_MK2206_60min_R1 2 FISDRESRR 9 2 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 FISDRES(1)RR;FIS(0.018)DRES(0.982)RR 87.363 0.00023605 40973000.0 991.0 1480.03 1487.4 1224.6 2694.33 1875.0099999999998 1816.96 2036.8400000000001 2544.1800000000003 1854.67 2063.33 True False 1158.2565723761895 1555.3572052807501 1698.3356858661787 1524.627054974383 2297.9976261573697 2073.422313669093 2147.0781128888125 2325.5683075608895 1967.9272922206128 1435.6987588757434 1550.9482159889897 0.7468054448469169 1.0028427701494527 1.095030555087363 0.9830289878519107 1.4816726970423129 1.3368739796041085 1.384364797453724 1.4994493585190074 1.2688542866440766 0.9256909702560537 1.0 10.598934802252677 -5.335552888064623 1.0687701591087804 1.207043121570624 0.5725905500390223 0.3890279560690779 0.18609813885609142 1.4666152245094632 1.4277191056512977 0.03027655790056768 1.018384425569049 4.617927516870516e-06 5.335552888064623 -0.6344525715316018 FISDRES(ph)RR ddPTM_A549_PD325901_60min_R1 6 FISDRESRR 9 2 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 FISDRES(1)RR;FIS(0.2)DRES(0.8)RR;FISDRES(1)RR;FISDRES(1)RR;FISDRES(1)RR;FISDRES(1)RR 99.522 0.00016509 411559600.0 21958.350000000002 22553.730000000003 24315.889999999996 23566.86 26063.919999999995 24091.640000000003 24120.85 24658.13 24107.48 27485.89 28219.0 True False 24187.545527117112 24454.411979422337 25966.112518724964 25022.531417977614 24233.280174842665 23895.4456713978 25038.782146185575 24166.30425322124 23094.32645161995 25750.426214628667 24748.241894979485 0.9773439919392368 0.9881272408438534 1.0492103895263987 1.011083192259155 0.9791919877653497 0.965541139156447 1.0117398339825112 0.9764856976819715 0.9331703863903539 1.0404951722995923 1.0 14.595038419914017 -6.838088548179332 4.671532842802226 0.9718588849626371 1.0081865776665373 0.0 0.03262602618882149 0.2474792522323043 9.996432447103167 0.004558009399573814 0.008894471631885517 1.4518155771407298e-07 6.838088548179332 0.03632769270390024 FISGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 FISGTPR 7 0 Q9Y4B6-3;Q9Y4B6-2;Q9Y4B6 Q9Y4B6-3 VPRBP Protein VPRBP 1 FISGT(1)PR;FIS(0.001)GT(0.999)PR 93.14299999999999 0.012913999999999998 50374000.0 7290.5 7535.0 7643.599999999999 7099.1 9943.9 7006.9 6338.9 7395.0 10808.099999999999 10415.4 10336.8 True False 8520.958164388101 7918.499315412838 8727.577415951808 8838.379818690706 8481.165482604674 7748.365507196211 7490.596077949373 8443.263896237686 8360.082606989119 8062.553906190543 7769.887278833238 1.0966643219652534 1.0191266657090958 1.1232566320141495 1.1375171223871239 1.0915429244011174 0.9972301050369602 0.9640546650342391 1.0866649145913434 1.0759593166510528 1.0376667790476946 1.0 12.923677953636398 -7.223747917342434 16.406983257168566 1.0325384271041298 1.0935695375899481 0.3714762621288341 0.042858056757056624 10.860476423037532 4726.526000714143 0.0071385349222379815 0.012361177330248323 5.973819313958748e-08 7.223747917342434 0.06103111048581833 FISGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 FISGTPR 7 0 Q9Y4B6-3;Q9Y4B6-2;Q9Y4B6 Q9Y4B6-3 VPRBP Protein VPRBP 1 FISGT(1)PR;FIS(0.001)GT(0.999)PR 88.921 0.013482 78314000.0 9362.5 9544.400000000001 10027.9 10172.8 10722.2 10762.0 10820.8 11517.400000000001 10601.400000000001 10902.9 12204.599999999999 True False 10312.974107691782 10348.740084074714 10708.453596661364 10801.150751894924 9969.109661581917 10674.357840129724 11232.591465368956 11287.676421774488 10155.86002536158 10214.489033299444 10703.511571333736 0.9635131460325697 0.9668546640142685 1.0004617199967218 1.0091221633115888 0.9313868252622155 0.9972762461170134 1.0494304967588588 1.0545769345459735 0.9488344042679524 0.954311953158999 1.0 13.385796568271134 FIVS(ph)PVPESR ddPTM_A549_MK2206_60min_R1 1 FIVSPVPESR 10 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4;H0YH68 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 FIVS(1)PVPESR 136.02 5.7872e-07 7608200.0 1501.9 1626.1 1626.6 1194.1 2195.4 1602.4 1358.7 1062.1 2027.3 1976.6 2408.7 True False 1755.3840020704345 1708.8615443653366 1857.276339000893 1486.6545536051854 1872.4595682287954 1771.9649044129662 1605.5582027023318 1212.6559275448346 1568.1197869328612 1530.0846871916813 1810.5533132619 0.969529032485615 0.9438338721363829 1.0258059375533197 0.8211050968318755 1.0341918984177079 0.9786869524546544 0.8867776446802065 0.6697709029954544 0.8660997582599379 0.8450923129322685 1.0 10.822214943467968 -7.759405269248533 24.91651635032533 0.9074820952439495 0.9611088723110899 0.14880299454469426 0.0957772249623456 135.0425376363104 1654172.1206808574 0.016499646500008402 0.023800741702784924 1.7401822349656807e-08 7.759405269248533 0.05362677706714036 FIVS(ph)PVPESR ddPTM_A549_PD325901_60min_R1 2 FIVSPVPESR 10 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4;H0YH68 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 FIVS(1)PVPESR;FIVS(1)PVPESR 149.94 2.8648e-08 27373000.0 7344.5 6048.6 7215.1 7982.0 8127.700000000001 7278.5 6978.3 7130.4 6769.6 6959.2 7076.6 True False 8090.108233264869 6558.3367495635475 7704.760073920909 8475.030011562727 7556.838391042817 7219.226309178982 7243.863025172284 6988.178578309408 6485.097253918138 6519.794924335498 6206.2230622634315 1.3035477700529794 1.0567355835856307 1.241457162693562 1.3655696752336604 1.2176227498157006 1.1632237895339366 1.1671934689583041 1.1259953933658315 1.044934606580673 1.050525393452053 1.0 12.59949983538595 -8.416076642349308 0.8947968660901151 1.0121273619945892 1.230564119459509 0.5678179870998877 0.07295782984376875 0.2501098860440408 0.3956787800864448 0.015635335483077998 0.01933302928996702 3.836395365270419e-09 8.416076642349308 0.21843675746491975 FKAEAPLPS(ph)PK ddPTM_A549_MK2206_60min_R1 4 FKAEAPLPSPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK 107.46 7.6613e-05 1182025900.0 20584.1 23633.1 22326.7 21431.100000000002 33772.4 22935.7 21867.6 22748.3 33428.0 25391.800000000003 25556.8 True False 24058.19284707237 24835.92384486834 25492.961784071817 26681.720462078636 28804.52469802777 25362.740550514525 25840.659861200784 25972.94118874697 25856.611373546904 19655.77474462903 19210.341228202662 1.2523563512631721 1.2928413686065487 1.3270436730528061 1.3889248579773927 1.4994280609518746 1.3202649681870064 1.3451431993963836 1.3520291430646816 1.345973560094126 1.0231871735715152 1.0 14.229595524990348 -10.589306897012952 0.6687863398766487 0.9730074367540413 1.3541767884534368 0.8225670627351714 0.05990860158584914 0.2872957436592594 0.2057573304351534 0.061640032062898864 0.01307764269122515 2.574501226052849e-11 10.589306897012952 0.3811693516993955 FKAEAPLPS(ph)PK ddPTM_A549_PD325901_60min_R1 4 FKAEAPLPSPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK 101.53 0.00018862 783368700.0 15107.4 15595.6 16295.199999999999 17929.5 21559.399999999998 19073.8 18218.6 20355.1 26587.5 31824.6 35309.4 True False 16641.092126519925 16909.895944762953 17401.09026299787 19036.964494151085 20045.142119892284 18918.469296698244 18911.918792600438 19949.101562232972 25470.119835521822 29815.189324779793 30966.56764472834 0.5373889776044604 0.5460694300629616 0.5619315147431324 0.6147586233178117 0.6473155937030274 0.6109320707979359 0.6107205360817556 0.6442141664230924 0.8225038088733022 0.9628186651760046 1.0 14.918423862130911 -9.067818787791916 0.5411409558583152 0.9910067458560646 0.5611820589159601 0.9451996716912907 0.03671103772067793 0.11678509143446282 0.07932677978140765 0.017411257858563452 0.01338137631329245 8.554235694985657e-10 9.067818787791916 -0.42982468694010456 down FKEECKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 FKEECKSPK 9 2 H7C5E4;Q8IZH2-2;Q8IZH2 H7C5E4 XRN1 5-3 exoribonuclease 1 1 FKEECKS(1)PK 46.88 0.0073097 12961000.0 7205.6 7316.3 8020.3 6373.4 7687.7 7065.1 6864.0 7510.6 6054.3 7081.9 7521.3 True False 7937.107207517642 7932.870277557085 8564.605787981844 6767.070442958393 7147.742473125225 7007.5641680264425 7125.2132761249195 7360.795191048285 5799.858825395379 6634.747625395383 6596.227781448994 1.2032797335834415 1.2026374073780801 1.2984096474152467 1.0259000548752835 1.083610619576736 1.0623593363064685 1.0801951527755949 1.1159097949512196 0.8792690333870374 1.0058396776495075 1.0 12.687425503554637 -7.008972671435193 0.5074906263188318 0.9483235900019215 1.254381260839428 0.5379721623562577 0.0750583876783353 0.6160992286792052 0.2666208011972623 0.01982075479525922 0.0834668397686663 9.795516230736598e-08 7.008972671435193 0.30605767083750657 FKETERPS(ph)IK ddPTM_A549_MK2206_60min_R1 1 FKETERPSIK 10 2 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 ANLN Actin-binding protein anillin 1 FKET(0.003)ERPS(0.997)IK 40.066 0.021228999999999998 2740500.0 3002.4 3803.3 3610.3 2734.0 3325.4 3233.8 2668.6 2400.7 4643.2 4438.9 4415.2 True False 3509.1317183675797 3996.871724792254 4122.294827674243 3403.830122733926 2836.2380651307417 3575.9985695772916 3153.4500770820923 2741.006576835403 3591.5226136667793 3436.1494070500617 3318.7839866791005 1.0573546613616598 1.2043181300243868 1.2421100150598128 1.0256256919390303 0.8546015879655933 1.0775026587842402 0.9501823829870749 0.8259068947654399 1.0821802889499268 1.03536398296546 1.0 11.69643901486508 -6.350101971786156 6.817896813340462 1.0065330341282857 1.1710268954708452 0.44163779383809654 0.09034087649095096 0.19703518637840073 12.884427740375706 0.013244460861281424 0.031002154006855312 4.465787237296116e-07 6.350101971786156 0.1644938613425595 FKETERPS(ph)IK ddPTM_A549_PD325901_60min_R1 1 FKETERPSIK 10 2 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 ANLN Actin-binding protein anillin 1 FKETERPS(1)IK 62.042 0.001484 7287100.0 3264.6 3537.4 3162.4 3767.5 4331.7 3711.8 4101.2 4342.7 4569.5 4468.7 4775.3 True False 3596.0197887285 3835.50911250638 3377.019481056044 4000.2099183866953 4027.456335553745 3681.57233144337 4257.273410262752 4256.081441717755 4377.459805864293 4186.545519366889 4187.968373120788 0.8586549535112225 0.9158400376477145 0.8063622215321455 0.955167174628356 0.961673054028478 0.8790831265757477 1.01654860566445 1.0162639882942122 1.0452466245828644 0.9996602520298311 1.0 12.03203483196565 -7.340158485328228 0.8051752416764507 1.0230869975190013 0.8723550843310285 0.6294574068388381 0.04427405681956207 0.27791334851895344 0.35509583127465283 0.008078935382818276 0.019578017618884804 4.569214167028426e-08 7.340158485328228 -0.15073191318797285 FKFEPPREPGWLGEGAS(ph)PGAGGGAPLQEELK ddPTM_A549_MK2206_60min_R1 1 FKFEPPREPGWLGEGASPGAGGGAPLQEELK 31 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 FKFEPPREPGWLGEGAS(1)PGAGGGAPLQEELK 48.76 0.0019711 1809100.0 820.1 778.06 866.07 825.75 1382.9 878.15 895.99 1019.7 1564.2 1187.5 1944.5 True False 958.5128304800332 817.6599306370412 988.891748996989 1028.0587870693264 1179.477241916553 971.075250131207 1058.7797851175847 1164.2455977002796 1209.9111975141232 919.2429252454316 1461.6269845301474 0.6557848484086078 0.5594176484774499 0.6765691653639501 0.7033660420547071 0.8069618681100816 0.664379667595811 0.7243843992507696 0.796540847988337 0.8277838397346362 0.6289175931853298 1.0 10.513359458994953 -10.619894240819727 0.09435591401491478 1.4791031156654955 0.3585244349692011 0.0 0.12217252158028677 7.52182290910417 0.1802049804179185 1.5349867659442251 0.6716426465356405 2.3994171527744362e-11 10.619894240819727 -1.1205786806962943 FKFEPPREPGWLGEGAS(ph)PGAGGGAPLQEELK ddPTM_A549_PD325901_60min_R1 2 FKFEPPREPGWLGEGASPGAGGGAPLQEELK 31 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 FKFEPPREPGWLGEGAS(1)PGAGGGAPLQEELK;FKFEPPREPGWLGEGAS(1)PGAGGGAPLQEELK 104.78 5.687300000000001e-15 7219700.0 2881.3999999999996 3473.7 3531.7 3980.9 4146.1 4445.7 3374.7 4814.2 3772.2 3944.2 4106.3 True False 3173.9176068254296 3766.4408899512086 3771.3823998373496 4226.791151720131 3854.8922392685054 4409.495693167135 3503.126055206699 4718.177004333162 3613.6675521788566 3695.1625388786183 3601.2511319803793 0.881337482587627 1.0458701023385695 1.0472422670960502 1.1737007492159421 1.070431385646978 1.2244343789327157 0.9727525037334123 1.3101493984782364 1.0034478073712259 1.0260774390500769 1.0 11.81428249352928 FKGTES(ph)ISK ddPTM_A549_PD325901_60min_R1 2 FKGTESISK 9 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 FKGT(0.015)ES(0.935)IS(0.05)K;FKGTES(0.999)ISK 73.848 0.00061338 5902100.0 3513.2 4043.0 4489.2 4098.0 5597.9 5366.6 4509.4 4696.2 5739.2 5052.2 5039.1 True False 3869.857477718853 4383.717798909732 4793.864107752589 4351.124152766732 5204.7228157066065 5322.896188890558 4681.007684638362 4602.53060690237 5498.001382605617 4733.203229786156 4419.322645486768 0.8756675599757224 0.9919433701874205 1.0847508752610133 0.9845681118599285 1.1777195813077663 1.2044597364545364 1.0592138343686763 1.041456118077892 1.2440823681928834 1.0710245912051564 1.0 12.109609547744217 -4.979867810832207 0.8191550153452763 1.1147643363512174 0.6316845166534429 0.43351004802698545 0.07765053119330136 3.0037331931963904 1.0703994882769878 0.015382777277408848 1.461551005488094 1.047447318205759e-05 4.979867810832207 -0.48307981969777447 FKIDSNIS(ph)PK ddPTM_A549_MK2206_60min_R1 4 FKIDSNISPK 10 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 FKIDS(0.009)NIS(0.991)PK;FKIDS(0.002)NIS(0.998)PK;FKIDS(0.004)NIS(0.996)PK;FKIDS(0.005)NIS(0.995)PK 127.71 1.2802e-06 738552700.0 21737.699999999997 25067.5 23904.5 21722.1 30524.899999999998 24349.399999999998 22657.3 22717.5 33876.2 31822.899999999998 30800.199999999997 True False 25406.49232426025 26343.328678050588 27294.517549272594 27044.01547514213 26034.727646090512 26926.037346176417 26773.83812915841 25937.775194425907 26203.294789175237 24634.08478803608 23151.66029772459 1.0973939664602488 1.137859157368497 1.1789442829702876 1.1681242350381278 1.1245296152107622 1.1630283530388006 1.1564543443041888 1.1203419046786525 1.1318106110839303 1.064031022883365 1.0 14.498828038149572 -10.539400933095918 0.5338098965485444 0.9795842628574327 1.1486205283717612 0.6697519689029883 0.028706043343500538 0.33869527845052877 0.14522956450951735 0.028325227669757456 0.0053267025257109114 2.8880124885179753e-11 10.539400933095918 0.1690362655143285 FKIDSNIS(ph)PK ddPTM_A549_PD325901_60min_R1 4 FKIDSNISPK 10 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 FKIDS(0.043)NIS(0.957)PK;FKIDS(0.003)NIS(0.997)PK;FKIDS(0.058)NIS(0.942)PK;FKIDS(0.005)NIS(0.995)PK 142.83 3.932e-08 1136275000.0 32883.4 32377.4 34011.899999999994 32294.6 40707.100000000006 36822.6 36331.9 36649.9 38022.600000000006 35743.1 37409.0 True False 36221.69856052037 35105.95712649518 36320.15206416965 34289.36409564189 37847.97372787125 36522.7289540941 37714.53033607854 35918.88899320965 36424.642349153226 33486.274566044405 32807.930155189344 1.104053147796374 1.0700448629473307 1.1070540534671542 1.045154751715363 1.1536227231904388 1.113228685300562 1.1495553104898666 1.0948233803017968 1.1102389628622096 1.0206762330828654 1.0 15.001756956976655 -10.621012524109691 0.7919280826282525 0.9964936107892176 1.105596407913912 0.5987423843202342 0.029790076135348533 0.3476298258157328 0.3698178272020953 0.023276187129416905 0.005576571961436341 2.3932467393717454e-11 10.621012524109691 0.1091027971246944 FKIDSNIS(ph)PKK ddPTM_A549_MK2206_60min_R1 3 FKIDSNISPKK 11 2 Q9H501 Q9H501 ESF1 ESF1 homolog 1 FKIDS(0.004)NIS(0.996)PKK;FKIDSNIS(1)PKK;FKIDS(0.027)NIS(0.973)PKK 75.764 0.00026509 94583400.0 11380.2 12464.6 12538.8 12988.2 14763.300000000001 11658.3 10273.5 10281.2 14728.900000000001 16447.6 16226.0 True False 13300.899540822917 13098.99489938882 14316.990384522553 16170.309583062446 12591.638126825255 12891.973567846775 12140.06196766203 11738.591584854483 11392.827667220146 12732.075736645696 12196.636385181882 1.0905383353875042 1.0739842105404769 1.1738474389477382 1.3258007431219576 1.0323861209901506 1.0570105692016598 0.9953614737921853 0.9624449900889155 0.9340958693383439 1.0439005750892383 1.0 13.574195712624821 -7.3309543670194985 1.7499819730896706 0.969549931208955 1.1556625547261516 0.5072827524656385 0.07295941641720959 0.1930690548438838 1.154988214921629 0.011294748205242991 0.020688456688955362 4.667084165744896e-08 7.3309543670194985 0.1861126235171966 FKIDSNIS(ph)PKK ddPTM_A549_PD325901_60min_R1 4 FKIDSNISPKK 11 2 Q9H501 Q9H501 ESF1 ESF1 homolog 1 FKIDS(0.002)NIS(0.998)PKK;FKIDS(0.067)NIS(0.933)PKK;FKIDS(0.059)NIS(0.941)PKK;FKIDS(0.392)NIS(0.608)PKK 87.647 6.3063e-05 149941600.0 23221.7 23340.4 25994.5 25969.8 28904.0 28847.0 28341.799999999996 31224.200000000004 28813.699999999997 27888.9 29864.6 True False 25579.149889087996 25307.37742114091 27758.643087626915 27573.895564304916 26873.882753386762 28612.079596192376 29420.36270822804 30601.408836088976 27602.76039134085 26127.990094450553 26191.44352729736 0.976622379076922 0.9662459953673399 1.0598363186319295 1.0527825828143733 1.0260558080877882 1.0924208727316678 1.1232814517292802 1.16837427475868 1.0538846536874755 0.9975773220448627 1.0 14.676807954789023 -5.7593857187844 24.945826958161845 1.0500182130791982 0.9714341584222713 0.3107566556564403 0.04970141217612503 57.214428513464654 694925.4970492554 0.007851818316597108 0.027645529316280615 1.7402605738291984e-06 5.7593857187844 -0.07858405465692686 FKIDSNISPK ddPTM_A549_MK2206_60min_R1 2 FKIDSNISPK 10 1 Q9H501 Q9H501 ESF1 ESF1 homolog 0 ; 91.936 0.00063733 22464000.0 5237.6 6099.7 4897.5 4953.5 6890.6 5274.9 5606.6 5647.200000000001 8134.799999999999 7477.7 7584.7 False True 6121.578832974299 6410.148676074803 5592.039143155582 6167.107722371064 5877.001867922626 5833.086416804761 6625.246646994102 6447.707893824672 6292.280788606242 5788.4823765118035 5701.209662929187 1.073733329398227 1.1243488759508933 0.9808513409911125 1.0817191590885127 1.0308341940371861 1.0231313636355233 1.1620773552801003 1.130936814295643 1.10367468671085 1.0153077537474349 1.0 12.477052342457611 -10.842953074837329 1.1503606565475286 1.0010397922123104 1.079962288621536 0.2305281590010152 0.05006294199766445 0.5489380020352599 1.3160156506313931 0.03338929510963923 0.008636316566781776 1.4356445451896068e-11 10.842953074837329 0.07892249640922566 FKIDSNISPK ddPTM_A549_PD325901_60min_R1 2 FKIDSNISPK 10 1 Q9H501 Q9H501 ESF1 ESF1 homolog 0 ; 97.214 0.00052568 19491400.0 6710.799999999999 6473.799999999999 5968.4 6764.9 7960.6 6737.9 6471.2 6834.2 8540.900000000001 6437.1 7051.9 False True 7392.075475770148 7019.369845803078 6373.4515149047875 7182.7525087973845 7401.474918579118 6683.028776343628 6717.465057176518 6697.88651967382 8181.955674779815 6030.660407437642 6184.561005677233 1.1952465937330805 1.1349827157270365 1.030542266307044 1.1614005427715635 1.1967664175007404 1.080598731293752 1.0861668356104976 1.0830011238510495 1.3229646643098898 0.9751153561104312 1.0 12.594455477695634 FKIPGS(ph)PPESMGR ddPTM_A549_MK2206_60min_R1 3 FKIPGSPPESMGR 13 1 P50395-2;P50395;Q5SX86;Q5SX87;V9GYJ7;V9GYF8;Q5SX90 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 1 FKIPGS(0.992)PPES(0.008)MGR;FKIPGS(0.996)PPES(0.004)MGR;FKIPGS(0.847)PPES(0.153)MGR 72.446 0.00047663 40901000.0 6402.3 6799.6 8047.9 6194.3 10577.099999999999 6772.04 7262.3 6586.969999999999 10933.4 8911.6 10446.0 True False 7482.851718793221 7145.670596560201 9189.213235365356 7711.903778072691 9021.222601399646 7488.65277788366 8581.765905266164 7520.693169249599 8457.00235705211 6898.463370625001 7851.969905066555 0.9529903717492401 0.9100481386141576 1.1703067314911553 0.9821616576875206 1.1489120195912392 0.9537291747707207 1.092944319581345 0.9578097293007712 1.0770548613024042 0.8785646728184356 1.0 12.938838927933002 -5.677623280584593 24.99999999999111 1.0406809228930949 0.931516271385103 0.15325102496465592 0.08489745719423611 23.439151296866257 6988.6558014811935 0.008451890038050454 0.0327340257260384 2.100761353803055e-06 5.677623280584593 -0.10916465150799193 FKIPGS(ph)PPESMGR ddPTM_A549_PD325901_60min_R1 2 FKIPGSPPESMGR 13 1 P50395-2;P50395;Q5SX86;Q5SX87;V9GYJ7;V9GYF8;Q5SX90 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 1 FKIPGS(1)PPESMGR;FKIPGS(0.999)PPES(0.001)MGR 87.088 5.4414e-05 34505000.0 4985.8 5138.1 5350.6 4892.9 6975.1 6006.9 5439.9 6814.9 6158.3 5723.4 5518.6 True False 5491.954745648033 5571.105719163519 5713.723891771591 5195.123320417852 6485.193038788686 5957.981797981349 5646.9183713275015 6678.971473314372 5899.48806706512 5362.023547238448 4839.847185287708 1.1347372211136373 1.1510912443886057 1.180558739362746 1.073406477834697 1.3399582239915637 1.2310268423541502 1.166755510069233 1.3799963547645224 1.218940979169453 1.1078910845652452 1.0 12.240745780817313 -10.559788208771261 0.9532361767057592 1.0050757078275179 1.2085637449227247 0.2863632338250133 0.08886551605526012 0.3844920285351781 0.6467507732658937 0.05013997447441464 0.015456624416868587 2.7555721782432327e-11 10.559788208771261 0.2034880370952068 FKIPGSPPES(ph)MGR ddPTM_A549_PD325901_60min_R1 1 FKIPGSPPESMGR 13 1 P50395-2;P50395;Q5SX86;Q5SX87;V9GYJ7;V9GYF8;Q5SX90 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 1 FKIPGS(0.222)PPES(0.778)MGR 43.99100000000001 0.014907 39990000.0 4674.4 4654.4 4763.2 5084.0 5599.3 6406.3 5107.4 5209.4 6498.4 5616.4 5661.5 True False 5148.941646888596 5046.642622618218 5086.459395448444 5398.02713339826 5206.0244845363495 6354.129216801997 5301.764901876521 5105.494430304756 6225.294846794735 5261.77954549918 4965.171391205445 1.0370118654934357 1.0164085436319639 1.0244277578127174 1.0871784089788945 1.0485085154880083 1.2797401572192941 1.0677909147843854 1.0282614693518652 1.2537925393313276 1.059737747385539 1.0 12.277627803216232 -6.609108469395201 1.919067322402932 1.1204035543597768 1.026108088226384 0.13895994814588564 0.08379950216760922 0.5526773094409305 4.080788282159309 0.015493730966995975 0.03986556787026915 2.459753179436775e-07 6.609108469395201 -0.09429546613339279 FKIPSLGWSPSK ddPTM_A549_MK2206_60min_R1 2 FKIPSLGWSPSK 12 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 0 ; 91.85799999999999 0.00027153 4275300.0 1448.51 1406.76 1255.42 1185.62 2787.8999999999996 1864.42 1578.49 1694.3600000000001 2139.35 2577.3 2593.8 False True 1692.9830753306105 1478.3580752422245 1433.4574336090618 1476.0969532245033 2377.8036031087972 2061.7116868981657 1865.2812006944891 1934.5407187598764 1654.7906408399424 1995.0861399874116 1949.6878747617873 0.8683354383262291 0.7582537155711911 0.7352240592788225 0.7570939801863684 1.219581674527938 1.0574573056469696 0.9567075965543403 0.9922309841498288 0.8487464389868684 1.0232848887318289 1.0 10.929027466290442 FKMPFLSIS(ph)SPK ddPTM_A549_PD325901_60min_R1 2 FKMPFLSISSPK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKMPFLS(0.013)IS(0.861)S(0.126)PK;FKMPFLS(0.023)IS(0.76)S(0.217)PK 115.68 5.8683e-06 27716000.0 9086.9 7510.9 11172.6 10147.0 12872.8 14043.5 11159.9 11262.099999999999 11680.1 9837.099999999999 9643.2 True False 10009.395398577779 8143.8699025058395 11930.839822301654 10773.757144490979 11968.658936749145 13929.13439210758 11584.5961014316 11037.468580553463 11189.226015641878 9215.983827190013 8457.147533281342 1.1835427204252837 0.962957057383395 1.4107404151754854 1.2739232822997473 1.4152122674517598 1.6470251154177427 1.3697994573043493 1.3051053605388583 1.3230496419282045 1.0897272148703128 1.0 13.04595543104336 -10.511945099485196 0.7959884652463849 0.9970006591461189 1.3255989650612434 0.30200101728825357 0.16015117566827508 0.6104511144347516 0.6857269834529639 0.11906961047086514 0.03269874024841304 3.0764856982759176e-11 10.511945099485196 0.3285983059151245 FKMPFLSISS(ph)PK ddPTM_A549_PD325901_60min_R1 1 FKMPFLSISSPK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKMPFLS(0.044)IS(0.208)S(0.748)PK 49.988 0.019844 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FKMPS(ph)FGASAPGK ddPTM_A549_PD325901_60min_R1 1 FKMPSFGASAPGK 13 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FKMPS(0.999)FGAS(0.001)APGK 73.983 0.00032955 1329400.0 1373.4 1664.4 1305.1 1152.2 1509.4 2228.5 1911.9 2347.9 2044.8 1877.9 1772.1 True False 1512.8265569563578 1804.6648292123086 1393.671934203846 1223.3687771639413 1403.3849511473147 2210.35183485682 1984.6584007318231 2301.069292608082 1958.8641669835445 1759.329073515581 1554.142934267449 0.9734153298257822 1.1611961740590766 0.8967463052944731 0.7871661931407749 0.9029960631058722 1.422232013620213 1.2770115006618097 1.4806033871605893 1.2604144212172237 1.1320252691846824 1.0 10.601903478932778 -7.223321538500725 24.853519645896792 1.187179525077442 0.9449815574826884 0.47290646683564097 0.15649889552872862 542.9680880039598 354025.13269934314 0.027978183397666202 0.048458977832680585 5.979687131805509e-08 7.223321538500725 -0.24219796759475354 FKMPS(ph)FGVSAPGK ddPTM_A549_MK2206_60min_R1 4 FKMPSFGVSAPGK 13 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FKMPS(0.999)FGVS(0.001)APGK;FKMPS(0.997)FGVS(0.003)APGK;FKMPS(1)FGVSAPGK;FKMPS(0.903)FGVS(0.097)APGK 106.36 2.618e-05 21618700.0 5962.8 9309.699999999999 8714.7 6736.1 10401.5 7244.5 6152.700000000001 6027.6 10189.900000000001 11484.7 10400.2 True False 6969.1748635365775 9783.523965056247 9950.575501961812 8386.444802395024 8871.45312878373 8011.108181490093 7270.565948161211 6882.030758750816 7881.90391992658 8890.298293529444 7817.543309082253 0.8914788940714842 1.2514831806163402 1.2728519828475333 1.072772413381047 1.1348134289805685 1.0247603198031485 0.9300320651520312 0.8803316446939823 1.0082328435289325 1.1372240539046183 1.0 12.932499591345197 -7.329396407020295 3.3962880119443835 0.9873691002856628 1.1384058300842237 0.24846726336252778 0.11043358077484097 0.21985788528534664 5.005005473000064 0.014835608222607433 0.024819245890370777 4.683856628550841e-08 7.329396407020295 0.15103672979856086 FKMPS(ph)FGVSAPGK ddPTM_A549_PD325901_60min_R1 4 FKMPSFGVSAPGK 13 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FKMPS(1)FGVSAPGK;FKMPS(1)FGVSAPGK;FKMPS(0.943)FGVS(0.057)APGK;FKMPS(0.903)FGVS(0.097)APGK 112.34 9.6049e-06 56028000.0 12514.900000000001 11948.9 12180.1 10758.2 17260.1 18315.9 19116.5 18684.0 17587.9 17310.2 19746.800000000003 True False 13785.403435017564 12955.875737668199 13006.714830891327 11422.709580355075 16047.81012011247 18166.74138301729 19843.988868450175 18311.332962685556 16848.741726569784 16217.231017822778 17318.068785278752 0.7960127428721073 0.748113193122397 0.7510488029674361 0.6595833358777836 0.9266512518851948 1.0490050367775392 1.1458546050653513 1.0573542113570498 0.9728995730108244 0.9364341497250697 1.0 14.079990437255908 -6.924203845088543 4.852744913910255 1.0091995526606603 0.7415429340408044 0.8326516586399828 0.06001761462157278 0.06737306957989657 2.9436536897404464 0.009168465909382618 0.017595246109639365 1.190683005177308e-07 6.924203845088543 -0.2676566186198559 FKNGTLILS(ph)PVDIKK ddPTM_A549_MK2206_60min_R1 2 FKNGTLILSPVDIKK 15 2 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 FKNGT(0.02)LILS(0.98)PVDIKK;FKNGT(0.001)LILS(0.999)PVDIKK 62.203 0.0010145 3975600.0 1049.63 1142.28 1601.38 1192.73 1865.21 1215.47 1265.44 1151.56 1714.06 1754.38 1977.2199999999998 True False 1226.7818830103135 1200.4171729276409 1828.4797637705933 1484.9489035436845 1590.840079828747 1344.0902286363128 1495.3540678793242 1314.797156504594 1325.8281467913666 1358.064339530174 1486.2217055040867 0.8254366616145079 0.8076972422633886 1.2302873501301892 0.9991435988616716 1.0703921722695986 0.9043672445763624 1.0061446837584302 0.8846574852428561 0.8920796553308856 0.9137696849001105 1.0 10.537433629053538 -8.215305712531693 24.928696962118586 0.9427850738823419 0.9823959351749328 0.04019499118689274 0.11335688086854062 1572.6969888116878 849820.7470203041 0.01868553551925956 0.024122882376288304 6.0910797745184915e-09 8.215305712531693 0.03961086129259095 FKPESS(ph)SPVKK ddPTM_A549_MK2206_60min_R1 1 FKPESSSPVKK 11 2 Q5TCQ9;Q5TCQ9-1 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 FKPES(0.04)S(0.48)S(0.48)PVKK 60.448 0.0027286 8439200.0 2795.8 3071.6 3704.6 3145.1 4526.8 3638.7 3382.8 3541.6 4854.5 4600.4 4887.1 True False 3267.662689252624 3227.931320135643 4229.9679856527155 3915.6496411889048 3860.9137166157007 4023.7448188264216 3997.410972327553 4043.6326456951174 3754.963501043541 3561.1664448834385 3673.498192901664 0.889523423631121 0.8787077468482238 1.1514822557491178 1.0659184884737802 1.0510182702896604 1.095344167203224 1.0881755652015261 1.1007580331762972 1.0221764933216226 0.9694210417102463 1.0 11.842938849582548 -5.7332658216421075 24.996631679775273 1.040974696330853 0.8841153172737775 0.6215654137148322 0.05126023222120581 119.95369305511979 106425.62652653879 0.007541966015590005 0.029197881682280744 1.8481370706137594e-06 5.7332658216421075 -0.1568593790570756 FKPESSS(ph)PVKK ddPTM_A549_MK2206_60min_R1 1 FKPESSSPVKK 11 2 Q5TCQ9;Q5TCQ9-1 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 FKPES(0.076)S(0.091)S(0.833)PVKK 56.599 0.0030491999999999997 48600000.0 13241.0 14266.0 14654.0 13897.0 21699.0 18071.0 17693.0 16093.0 25243.0 24970.0 23529.0 True False 15475.757088630813 14992.07846498732 16732.157550546588 17301.765623860032 18507.105844491492 19983.261225441038 20907.589078098437 18374.232032745513 19525.500804787738 19329.25965758183 17686.099932635556 0.8750237275361046 0.8476757748791722 0.9460625923339554 0.9782691316774522 1.046420969856727 1.1298851245642125 1.1821480800025548 1.0389080748571464 1.1040026280049453 1.0929068438607095 1.0 14.110328325363087 -6.284313979418239 1.4965326286419582 1.0656464884522239 0.8612550896481607 0.7475368724859639 0.050262807991712385 0.20507818642485215 0.8539036157545252 0.008980725232127045 0.034540652532209004 5.196201938396882e-07 6.284313979418239 -0.2043913988040632 FKRPQFS(ph)PTGDCQAEAAAAANGTGGEEDDGPAAELLEK ddPTM_A549_MK2206_60min_R1 1 FKRPQFSPTGDCQAEAAAAANGTGGEEDDGPAAELLEK 38 2 Q7Z4Q2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 1 FKRPQFS(0.736)PT(0.263)GDCQAEAAAAANGTGGEEDDGPAAELLEK 61.19 0.00014749 8172400.0 518.04 512.77 726.91 469.61 722.8 420.16 505.63 531.06 635.54 762.61 774.93 True False 605.4724871380032 538.8678027822483 829.9967684637516 584.6644710815939 616.4770774873704 464.6210523203645 597.4964260192679 606.3393813030409 491.5912047488333 590.3358713443529 582.4934940200293 1.0394493558363826 0.9251052729590128 1.424903070995007 1.0037270408748804 1.0583415674444812 0.7976416167566471 1.025756394111284 1.0409376027849535 0.8439428247621419 1.0134634590855258 1.0 9.186098125897939 -6.877276788342511 2.603388317631186 0.9347344922833093 1.113701015234082 0.18396347473704622 0.13786841006498016 0.29356937141169803 4.0365654477550414 0.01988301726365075 0.041137632409197246 1.326548740659012e-07 6.877276788342511 0.17896652295077276 FKRPQFS(ph)PTGDCQAEAAAAANGTGGEEDDGPAAELLEK ddPTM_A549_PD325901_60min_R1 2 FKRPQFSPTGDCQAEAAAAANGTGGEEDDGPAAELLEK 38 2 Q7Z4Q2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 1 FKRPQFS(0.794)PT(0.206)GDCQAEAAAAANGTGGEEDDGPAAELLEK;FKRPQFS(0.826)PT(0.174)GDCQAEAAAAANGTGGEEDDGPAAELLEK 100.71 1.4078e-14 20361400.0 2737.31 2477.5099999999998 3107.5 2636.9300000000003 2967.7200000000003 4000.1 4227.1 3869.9 3485.2 3302.5 3763.2 True False 3015.1996960988845 2686.298462522101 3318.3936369155267 2799.807177197457 2759.277585278198 3967.5245118289263 4387.964603657875 3792.7118086221794 3338.7291641094716 3093.9795863918243 3300.3502568902795 0.9135999095259437 0.8139434464308154 1.0054671106460829 0.8483363762231545 0.8360559851238633 1.2021525604883176 1.3295451276715062 1.149184635995521 1.0116287376283977 0.9374700700122338 1.0 11.688403426425277 -7.239231995646041 24.852913102757324 1.0568894646088753 0.8844419598166767 0.4482652166476667 0.11584431768351222 745.0680632026421 833827.1375320852 0.01893362222584094 0.032778768469177565 5.7645844295684844e-08 7.239231995646041 -0.1724475047921986 FKS(ph)DSGSLGDAK ddPTM_A549_MK2206_60min_R1 1 FKSDSGSLGDAK 12 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 FKS(0.439)DS(0.439)GS(0.122)LGDAK 51.888000000000005 0.007250100000000001 6077300.0 3110.0 3090.9 3809.7 3052.4 3388.8 3277.6 3078.6 2749.6 3359.7 3837.6 3969.8 True False 3634.891967800152 3248.2136076986776 4349.972746029572 3800.2381370274406 2890.312009116217 3624.4334565052022 3637.941769956131 3139.364220296841 2598.7333143384453 2970.683494671046 2983.989099093742 1.2181317850336966 1.0885474108082978 1.4577709909700034 1.2735429020774904 0.968606758648691 1.2146269091954685 1.2191538404282372 1.0520696008072843 0.8708923618815158 0.9955410009953666 1.0 11.543026549909351 -8.454845768835062 3.492433287973341 0.9392986747334147 1.2042739871679748 0.4728368587641919 0.11715778603875524 0.15047968089449335 3.59770285805932 0.020438812069794136 0.024503428684714515 3.5087645871990152e-09 8.454845768835062 0.2649753124345602 FKS(ph)LDDVIK ddPTM_A549_PD325901_60min_R1 1 FKSLDDVIK 9 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 FKS(1)LDDVIK 86.31299999999999 0.00033555 4212700.0 1158.9 1393.9 1431.7 1352.3 1465.1 1175.3 1149.5 1367.7 1570.1 1669.6 1575.3 True False 1276.5506748629116 1511.3688448924754 1528.863771511491 1435.8284997038681 1362.1964303206114 1165.728746469473 1193.2448515305357 1340.4201505601063 1504.1141571698272 1564.1811710642812 1381.5480866494636 0.9240001757440147 1.0939676001852774 1.106630877553671 1.039289557547031 0.9859927739643258 0.8437844167238532 0.8637012805138027 0.9702305431951335 1.0887164708234016 1.1321945187284361 1.0 10.432070062638308 -5.214950713824711 21.529400809421393 1.017458071134046 0.9239980542559282 0.07094622902283232 0.09037965579384495 12208.78898369904 5653209.646879724 0.012867771329109722 7.495927257643838 6.096060748335567e-06 5.214950713824711 -0.09346001687811778 FKS(ph)LDDVIKR ddPTM_A549_MK2206_60min_R1 1 FKSLDDVIKR 10 2 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 FKS(1)LDDVIKR 41.54 0.017997 1653400.0 391.4 305.57 173.2 274.33 355.44 340.36 305.23 222.32 442.3 459.83 314.56 True False 457.45875118873954 321.1222078050034 197.76236438888145 341.54086231514174 303.15524684852096 376.3766692873173 360.68634003888485 253.83454082644533 342.11975620796335 355.95408363419506 236.4460705856534 1.9347276529301576 1.3581202978320412 0.8363952249197618 1.444476795360477 1.2821327336827193 1.5918076724856107 1.5254486536633942 1.07354095670832 1.4469251079561896 1.5054345489968695 1.0 7.885367356126601 -10.90915329943751 0.7364812176623752 0.9492241154976978 1.3792357828502437 0.0 0.30587283530904646 1.204154829633097 0.9220081067353506 0.33284381218907033 0.04988423496695676 1.2326696425322904e-11 10.90915329943751 0.4300116673525459 FKS(ph)LDDVIKR ddPTM_A549_PD325901_60min_R1 1 FKSLDDVIKR 10 2 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 FKS(1)LDDVIKR 47.18899999999999 0.006914399999999999 4614200.0 1521.7 1189.1 1501.4 1620.2 1665.6 1996.3 1480.2 1535.8 2024.1 1769.5 2049.1 True False 1676.181863783667 1289.3096301468124 1603.29403265164 1720.2760742588237 1548.6140020080618 1980.0427946711548 1536.5298209965194 1505.1672641882083 1939.034115997356 1657.7734680152416 1797.0736903151228 0.9327285090294449 0.7174495053236953 0.8921693313369343 0.9572651825742147 0.8617420700964729 1.1018150259180233 0.8550177042139456 0.8375656893203262 1.0789953280420792 0.9224849692861207 1.0 10.811433853483479 -7.027587885590976 0.41311557032322055 1.0340144672400429 0.8069099302504883 0.06798829169959486 0.10182872725890031 1.4474312810215153 0.4008373934474512 0.030135533861656433 0.1319269821456939 9.384521084844929e-08 7.027587885590976 -0.22710453698955457 FKSDS(ph)GSLGDAK ddPTM_A549_MK2206_60min_R1 1 FKSDSGSLGDAK 12 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 FKS(0.005)DS(0.497)GS(0.497)LGDAK 45.434 0.013706999999999999 4427200.0 2437.8 2487.6 2875.5 2452.1 3508.6 2889.1 2742.9 2483.2 4052.7 4107.8 3712.3 True False 2849.2410415122854 2614.2082146013236 3283.28913856945 3052.864610078952 2992.489587814315 3194.82264437063 3241.249425327318 2835.201204481058 3134.769920832043 3179.8451270089977 2790.4334557322027 1.0210747135572353 0.9368466426716354 1.1766233420921781 1.094046734498418 1.0724103030183507 1.1449198467025679 1.1615576851220135 1.016043295587964 1.1233989165348104 1.1395523947997586 1.0 11.446273527097704 -5.739275532643399 24.99873882402344 1.0784493815741782 0.9789606721208448 0.32724542081707075 0.06074781981894101 252.21439149527788 284469.6597070729 0.009058395056974344 0.03502413561498158 1.8227389217414325e-06 5.739275532643399 -0.09948870945333343 FKT(ph)ITTAYYR ddPTM_A549_PD325901_60min_R1 2 FKTITTAYYR 10 1 P51153 P51153 RAB13 Ras-related protein Rab-13 1 FKT(0.981)IT(0.015)T(0.002)AYY(0.002)R;FKT(0.996)IT(0.002)T(0.001)AYYR 56.482 0.0059801 17879400.0 4370.799999999999 4544.5 4707.2 4911.4 5661.5 5031.0 5297.6 5649.7 6577.3 5858.5 6330.3 True False 4814.5203983871015 4927.480963924134 5026.658898693085 5214.766023401303 5263.8557711147 4990.029204022734 5499.20306695795 5537.012301396087 6300.878954176874 5488.593310182137 5551.713231077951 0.8672134524953279 0.8875604266338136 0.9054248102287303 0.9393075265864869 0.9481497966516258 0.898826901953263 0.9905416288748392 0.9973520012525919 1.1349431593305588 0.9886305509185032 1.0 12.438717333344343 -8.107815511239874 1.7997989112530426 1.0625554160852724 0.9092409350754797 0.602633464295877 0.04517701431065609 0.16864310942223504 1.0778808710160594 0.009275733665832519 0.012621050085095446 7.801614535602178e-09 8.107815511239874 -0.15331448100979272 FLADEDREPGSSAS(ph)SDTEEDSLPANK ddPTM_A549_PD325901_60min_R1 1 FLADEDREPGSSASSDTEEDSLPANK 26 1 Q8N344 Q8N344 MIER2 Mesoderm induction early response protein 2 1 FLADEDREPGS(0.017)S(0.017)AS(0.482)S(0.482)DT(0.001)EEDSLPANK 68.101 6.3878e-05 4509000.0 2095.4 1867.9 1811.3 2094.1 2144.4 1918.9 1912.2 1838.5 1631.1 2144.4 2000.2 True False 2308.12346544805 2025.3144883956195 1934.225710231726 2223.447800953835 1993.7847417783914 1903.2731146092665 1984.9698173959903 1801.8296752246504 1562.5505393030423 2009.0022180344074 1754.1880803124834 1.3157787875499023 1.1545594860243484 1.1026330254662153 1.2675082141464329 1.1365855030911094 1.0849880557107798 1.1315604293938633 1.0271587724525413 0.8907542793385623 1.14526044304014 1.0 10.776587723429456 -8.061325121221925 1.194672404165291 0.9485942062982456 1.1879096174477326 0.3754546995120407 0.08885805958790673 0.18616586469522992 0.5271541344544485 0.013120425904290857 0.018752967999089938 8.683101521915866e-09 8.061325121221925 0.23931541114948696 FLAPEAS(ph)GRDSPGGAR ddPTM_A549_MK2206_60min_R1 1 FLAPEASGRDSPGGAR 16 1 Q5SZL2-5;Q5SZL2 Q5SZL2-5 CEP85L Centrosomal protein of 85 kDa-like 1 FLAPEAS(0.647)GRDS(0.353)PGGAR 55.437 0.0034055 3839100.0 1164.9 1156.5 906.42 958.69 1607.4 1237.3 945.07 1199.3 1712.5 1577.9 1575.0 True False 1361.5066409293881 1215.3609101891102 1034.9639857353916 1193.5690930372295 1370.9535893099046 1368.230264746731 1116.7769858157742 1369.3044477022124 1324.6214843005587 1221.4512941008566 1183.8840322113563 1.15003379037578 1.026587805157705 0.8742106131815972 1.008180751291816 1.1580134134836875 1.155713082970667 0.9433161994167334 1.156620420958388 1.1188777348625283 1.0317322143616796 1.0 10.209312052835386 -6.5751842501458295 24.99871383670438 1.0704191511124002 1.005122022052975 0.10378231598076038 0.08838726593743379 179.78008816721476 85922.80630548201 0.013091702880018206 0.02725255650406348 2.6595964822481777e-07 6.5751842501458295 -0.06529712905942509 FLAPEASGRDS(ph)PGGAR ddPTM_A549_MK2206_60min_R1 1 FLAPEASGRDSPGGAR 16 1 Q5SZL2-5;Q5SZL2 Q5SZL2-5 CEP85L Centrosomal protein of 85 kDa-like 1 FLAPEAS(0.072)GRDS(0.928)PGGAR 44.089 0.016066999999999998 3036500.0 1072.4 1156.3 943.29 788.49 948.11 1153.6 1087.8 1176.3 1708.5 1454.4 1663.1 True False 1253.3949023372616 1215.1507310433785 1077.0627061454265 981.6700853966609 808.6442749537225 1275.6731863022953 1285.4391792887284 1343.0441272676662 1321.5274779138713 1125.8500298753308 1250.1063707750518 1.0026306013944803 0.9720378676976095 0.8615768476387012 0.7852692445587942 0.6468603743314837 1.0204517120502252 1.0282638416535472 1.0743438787812865 1.0571320239689197 0.9006033855961526 1.0 10.287835142797885 -7.476161597563366 24.996507459818087 1.031723082067562 0.854565985639386 0.3936097690710322 0.09741589692877063 289.1820021397897 154730.00437960276 0.014019115435465449 0.02241063479711021 3.340707118105465e-08 7.476161597563366 -0.177157096428176 FLAPEASGRDS(ph)PGGAR ddPTM_A549_PD325901_60min_R1 2 FLAPEASGRDSPGGAR 16 1 Q5SZL2-5;Q5SZL2 Q5SZL2-5 CEP85L Centrosomal protein of 85 kDa-like 1 FLAPEAS(0.018)GRDS(0.982)PGGAR;FLAPEAS(0.376)GRDS(0.624)PGGAR 73.44800000000001 0.00016416 12457800.0 4603.0 3182.8 4421.9 5169.700000000001 4440.7 4280.4 4138.5 4046.8 4610.2 4459.3 3952.5 True False 5070.293171450496 3451.0257260375706 4721.996725044817 5489.020627759442 4128.800551583331 4245.541841562095 4295.992882174096 3966.0833993468145 4416.449326402358 4177.739036971099 3466.367556961851 1.4627107737802707 0.9955740899739649 1.3622319755333394 1.5835079626034738 1.1911029294314304 1.2247812073579305 1.2393356479309374 1.1441612391569194 1.2740856974420856 1.2052210183483083 1.0 11.759208923722008 -14.351283264702747 0.20701306418394208 9.057326594152575e-09 1.3208080529231352 0.12173369968644066 0.15831050135783614 30.527169448450397 0.46299409541277836 12.493754793085719 0.11701904802608099 4.453656678584694e-15 14.351283264702747 1.3208080438658085 FLDGIYVSEK ddPTM_A549_PD325901_60min_R1 1 FLDGIYVSEK 10 0 H0Y9R4;H0Y9V9;D6RAN4;A0A2R8Y5Y7;P32969 H0Y9R4 RPL9 60S ribosomal protein L9 0 161.76 2.1441e-08 3371000.0 4926.4 4859.1 4705.8 5932.9 6670.1 6235.5 5738.4 5878.9 5083.7 5646.2 6174.8 False True 5426.524501376003 5268.593410012932 5025.163886274203 6299.36175840648 6201.615186595805 6184.720155373434 5956.777952172971 5761.640727592171 4870.049768042962 5289.69796841348 5415.338745282236 1.0020655690474602 0.9729019102642199 0.9279500549530816 1.1632442686792939 1.1451943227002304 1.142074475167684 1.0999825186120495 1.0639483508970935 0.8993065802736122 0.9767990918429226 1.0 12.402835870114062 -8.741940138150177 23.854600620276702 0.9524503392484143 1.0667811143393806 0.288017943895159 0.07396976343139017 136.28737211434603 166728.14527181472 0.014282244772708513 0.016180735458397055 1.8115897795171091e-09 8.741940138150177 0.11433077509096634 FLEESVSMS(ph)PEER ddPTM_A549_MK2206_60min_R1 2 FLEESVSMSPEER 13 0 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 1 FLEESVS(0.082)MS(0.918)PEER;FLEESVS(0.042)MS(0.957)PEER 94.69200000000001 6.0967e-05 6129000.0 2870.3999999999996 3152.4 3028.0 2624.2 3985.6000000000004 2994.0 3411.1 3541.3999999999996 4160.5 3918.3 4185.9 True False 3354.853345457736 3312.843695010936 3457.415931694765 3267.129117804816 3399.3235196923956 3310.8230927436457 4030.8527160064223 4043.4042950826442 3218.1533929532725 3033.1533086224645 3146.425505037152 1.0662427380171273 1.0528911902434566 1.0988392784636867 1.038362139060476 1.0803762918430377 1.0522490004747633 1.2810895123858421 1.2850786673987697 1.022796626775778 0.9639997208790264 1.0 11.619498070640306 -8.96505841286877 24.999823611613756 1.0100571717388847 1.1180334267367151 0.302188560807665 0.08317626483805138 182.63776581595388 130673.46212818107 0.015327789916823811 0.0162507680831914 1.0837811350038738e-09 8.96505841286877 0.10797625499783048 FLEGVR ddPTM_A549_PD325901_60min_R1 2 FLEGVR 6 0 F8VWS0;P05388;Q8NHW5;F8VW21;F8VZS0;F8VU65 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like 0 ; 124.32 0.041747 16303300.0 5211.3 5027.0 4597.4 4998.700000000001 5976.700000000001 4736.6 5680.6 6393.2 5843.799999999999 5579.200000000001 5296.4 False True 5740.347339643702 5450.642932258033 4909.40721041205 5307.458346128619 5556.91721049567 4698.026700014723 5896.778341543595 6265.682610631624 5598.205408361909 5226.928359847771 4644.976376645853 1.2358184141700241 1.1734490103465185 1.0569283484617296 1.142623323729613 1.196328411579206 1.0114210103706014 1.2694958732603225 1.3489159260603358 1.205217196907336 1.1252863170904106 1.0 12.181455544050953 -10.675469669017236 1.0444816703858817 1.0044206973530985 1.1794771200457324 0.15037276340230477 0.09497178584884816 0.45745915597150716 0.9205216893664235 0.05539469026245207 0.01622659948637904 2.1112046364923946e-11 10.675469669017236 0.17505642269263388 FLEHLS(ph)GAGK ddPTM_A549_PD325901_60min_R1 2 FLEHLSGAGK 10 0 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 FLEHLS(1)GAGK;FLEHLS(1)GAGK 73.848 0.00050938 7156600.0 1708.85 1734.4 1556.96 1866.8600000000001 1936.5299999999997 2146.25 2031.0 2106.07 2273.6499999999996 1784.58 2339.81 True False 1882.3311940111184 1880.5639748773292 1662.6246683610614 1982.1717022533196 1800.51481346582 2128.7716515869192 2108.290816405844 2064.062781670048 2178.0963973308576 1671.9013142416716 2052.028203277649 0.9173027890184559 0.9164415829536627 0.810234803647141 0.965957338737962 0.8774318065365313 1.0373988272610921 1.027418050608821 1.0058647236783473 1.0614358973487028 0.8147555241059499 1.0 11.002834844285994 -7.264326777923367 24.93104944912877 1.0281494544649832 0.897485480357885 0.20358211962908124 0.07475738408454007 97.4323458315715 841273.0567720854 0.005778174088116858 0.00948836366638006 5.440931046452211e-08 7.264326777923367 -0.13066397410709818 FLENGS(ph)QEDLLHGNPGSTYLASNSTSAPNWK ddPTM_A549_MK2206_60min_R1 1 FLENGSQEDLLHGNPGSTYLASNSTSAPNWK 31 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FLENGS(0.985)QEDLLHGNPGS(0.005)T(0.005)Y(0.005)LASNSTSAPNWK 50.645 0.0025224 2092900.0 465.41 415.21 355.66 479.58 588.71 619.06 506.86 682.25 592.81 601.24 1028.5 True False 543.9598298179643 436.3424154946996 406.09793601933916 597.0771215291641 502.1115388594215 684.5685183012298 598.9499010978901 778.9610268029973 458.5394815230447 465.41946642068507 773.0950648440506 0.7036131189476579 0.5644097800349028 0.5252884858361598 0.7723204411473082 0.6494822715764041 0.8854907364326812 0.7747428852345744 1.0075876334304759 0.5931217289759075 0.6020210030891477 1.0 9.594502018085679 -6.798608120482117 1.4241293955728926 0.8211843618304058 0.6031753063382643 0.25084690425041234 0.1403750498902802 0.4517947118582064 1.8341009053065396 0.024874057313682998 0.06421150746369479 1.5899807983152507e-07 6.798608120482117 -0.21800905549214145 FLENGS(ph)QEDLLHGNPGSTYLASNSTSAPNWK ddPTM_A549_PD325901_60min_R1 1 FLENGSQEDLLHGNPGSTYLASNSTSAPNWK 31 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FLENGS(0.995)QEDLLHGNPGS(0.002)T(0.002)YLASNSTSAPNWK 68.101 0.00016882 6238000.0 1313.5 826.83 818.57 744.96 1023.6 1049.6 1117.0 855.5 1211.2 1507.6 1421.3 True False 1446.845553052407 896.5098658601373 874.1230826612848 790.974487273086 951.7058672282967 1041.0524055937715 1159.5080462458532 838.4363813732332 1160.297476061458 1412.4098787113749 1246.4891103630307 1.1607366169697415 0.7192279967845331 0.7012681261264312 0.6345618912328247 0.7635091709314006 0.8351877260207854 0.9302191544281964 0.6726383523150433 0.9308524771014886 1.133110483652778 1.0 10.28365456380608 -8.932307982517427 7.248220477801884 0.9698284410090228 0.7944198273193332 0.29161978223099305 0.146968002031332 0.2276403571548985 20.128360744417673 0.023551207711715046 0.024914734150698403 1.1686703275664655e-09 8.932307982517427 -0.17540861368968952 FLEQS(ph)MDIEDLK ddPTM_A549_PD325901_60min_R1 1 FLEQSMDIEDLK 12 0 O95239;O95239-2;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 FLEQS(1)MDIEDLK 66.498 0.0018769000000000001 2019000.0 1752.8 1701.5 1576.6 1819.9 2123.6 1782.8 1700.1 1710.4 1813.9 1634.2 2009.6 True False 1930.7429656568393 1844.8913764147703 1683.5975568659744 1932.3110897072168 1974.4456620222852 1768.2814678854565 1764.7982358304164 1676.284730217157 1737.6680910071661 1531.0163331056838 1762.4319399039928 1.0954993052168671 1.046787302615084 0.9552695447392353 1.096389055348417 1.120296118855995 1.0033190092899602 1.001342631095617 0.9511202630091188 0.9859490466915984 0.8686952945196198 1.0 10.78335183048054 -7.495077027061003 22.654660227036914 0.990440282388544 1.0582392804139742 0.3868950498366275 0.055618020980326296 185.77182322730485 151378.7732404263 0.006310856835950097 0.01006771753105276 3.1983277996074246e-08 7.495077027061003 0.06779899802543021 FLES(ph)PSR ddPTM_A549_MK2206_60min_R1 2 FLESPSR 7 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 FLES(0.993)PS(0.007)R;FLES(0.943)PS(0.057)R 138.78 0.0054793 29411000.0 8555.1 9293.2 9415.1 8132.8 11529.0 9508.5 9198.2 9118.8 13447.0 12467.1 13191.6 True False 9998.99172788652 9766.184185533455 10750.302753797674 10125.336365095265 9833.099372373948 10514.683158768526 10869.393876570677 10411.417825153787 10401.27597044649 9650.773451223009 9915.76165036148 1.0083937150225877 0.9849151814956572 1.0841630862925966 1.0211355135514117 0.9916635472995139 1.0604009585471643 1.0961733712280621 1.0499866971665497 1.0489638957857876 0.9732760620432207 1.0 13.275507877791615 -7.267133827039518 24.91848949557663 1.0343165256362223 1.0200570510129694 0.057847369019983885 0.03832664825329181 1613.394926062898 7060056.43920943 0.005796652315877969 0.009401613497082607 5.4058771617449945e-08 7.267133827039518 -0.014259474623252943 FLES(ph)PSR ddPTM_A549_PD325901_60min_R1 2 FLESPSR 7 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 FLES(0.813)PS(0.187)R;FLES(0.798)PS(0.202)R 140.35 0.005437 54833000.0 5910.0 5528.14 5882.759999999999 5929.349999999999 7054.05 5728.26 5977.41 6015.900000000001 6762.87 5644.469999999999 6371.98 True False 6509.9788492879525 5994.015758809016 6281.99946950963 6295.59248296911 6558.597863151395 5681.61094975855 6204.883608514255 5895.908155117746 6478.650092413929 5288.077200908724 5588.266855309239 1.1649370042346892 1.0726072884501368 1.1241409245768743 1.1265733448265562 1.1736371996838832 1.0167035857209696 1.1103413221255152 1.0550512901001188 1.1593308372986455 0.9462821547050292 1.0 12.448185199761456 -10.960563301616853 1.164481247794527 0.9985686705304715 1.113265624232675 0.522862627775629 0.049213851742719375 0.3599600831696939 0.8496758760920101 0.03386789765748555 0.007457560762355088 1.0950569311272201e-11 10.960563301616853 0.11469695370220356 FLESAAADFS(ph)DEDEDDDVDGREK ddPTM_A549_MK2206_60min_R1 4 FLESAAADFSDEDEDDDVDGREK 23 1 O43815-2;O43815 O43815-2 STRN Striatin 1 FLES(0.023)AAADFS(0.977)DEDEDDDVDGREK;FLESAAADFS(1)DEDEDDDVDGREK;FLESAAADFS(1)DEDEDDDVDGREK;FLESAAADFS(1)DEDEDDDVDGREK 191.18 1.0965e-50 29698500.0 6822.4 8665.3 7336.9 6913.800000000001 10313.2 7613.4 7284.200000000001 7173.5 11540.7 10539.300000000001 11042.0 True False 7973.854328334323 9106.32675751119 8377.382744138476 8607.681310372272 8796.141941813434 8419.0449346341 8607.644851787978 8190.3655929223905 8926.74987671093 8158.464810138257 8299.966656303359 0.9607092002325851 1.0971522097134505 1.0093272769687966 1.0370742036457727 1.059780395037281 1.0143468381575131 1.0370698110276086 0.9867949995560846 1.075516354024334 0.9829515163102928 1.0 13.018889825352684 -11.239780067649102 1.7233122140792576 0.9999532304239598 1.0388090677979642 0.09998641005401654 0.03793207322371419 0.6115952042852192 3.2729018681539803 0.026338640322096173 0.005378938386505828 5.757314213743102e-12 11.239780067649102 0.03885583737400444 FLESAAADFS(ph)DEDEDDDVDGREK ddPTM_A549_PD325901_60min_R1 3 FLESAAADFSDEDEDDDVDGREK 23 1 O43815-2;O43815 O43815-2 STRN Striatin 1 FLESAAADFS(1)DEDEDDDVDGREK;FLESAAADFS(1)DEDEDDDVDGREK;FLESAAADFS(1)DEDEDDDVDGREK 390.14 0.0 1400573300.0 72549.3 72446.17 76508.1 77061.39 92341.58 83809.45 85169.57 91330.46 85018.67 85896.5 92994.51 True False 79914.45152802824 78551.46299575573 81700.3997465798 81821.29704118521 85855.82598195704 83126.93362613456 88410.7445929269 89508.80232794023 81445.63096028905 80472.98033081162 81556.774810769 0.9798628221070372 0.963150678506031 1.0017610423676517 1.0032434121019371 1.052712373449819 1.019252340703868 1.0840392450297445 1.0975029669285208 0.9986372211169725 0.9867111655350271 1.0 16.315517104186576 -6.000826791147493 2.359224891260378 1.0179112303270241 0.9713287446406316 0.2433152237918237 0.03567305453072296 0.4236419248335699 4.606819520945613 0.0057350620707774785 0.022036860085448192 9.98098054024651e-07 6.000826791147493 -0.04658248568639256 FLESYAT(ph)DNEK ddPTM_A549_MK2206_60min_R1 2 FLESYATDNEK 11 0 Q9BZI7;Q9BZI7-2;A0A087WYC8 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B 1 FLES(0.001)YAT(0.999)DNEK;FLESYAT(1)DNEK 110.38 8.9694e-05 58157000.0 6009.1 6738.0 6763.2 5063.7 8685.3 7358.799999999999 5632.3 7638.4 10474.5 9859.1 10693.400000000001 True False 7023.2891716102595 7080.935419675073 7722.323457476228 6304.306727318129 7407.703875347342 8137.503331623901 6655.616004327915 8721.16659161892 8102.042474339394 7631.922462557676 8037.933657173912 0.8737679945071362 0.8809397690605829 0.9607349086022874 0.7843193283502023 0.9215930600193389 1.012387471543899 0.8280257449484832 1.0850010666404564 1.0079757833169305 0.9494881132473807 1.0 12.972608954511944 -7.8050572480402804 1.0568193277777855 1.007758508246499 0.8851458321498961 0.31166741965434663 0.07069948335372706 0.35921776944052725 0.8092121311557523 0.011581810628254809 0.019090155591300697 1.5665445569684662e-08 7.8050572480402804 -0.12261267609660298 FLESYAT(ph)DNEK ddPTM_A549_PD325901_60min_R1 2 FLESYATDNEK 11 0 Q9BZI7;Q9BZI7-2;A0A087WYC8 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B 1 FLESYAT(1)DNEK;FLESYAT(1)DNEK 143.42 2.8225000000000005e-11 28329000.0 7749.9 7970.099999999999 8113.0 7851.299999999999 8720.7 8469.6 9217.1 9093.4 9288.9 10220.7 9902.7 True False 8536.66414282516 8641.768298068386 8663.59696743223 8336.256969403963 8108.188116781766 8400.626385686928 9567.86178429065 8912.025003365698 8898.519836019874 9575.363257724432 8684.730678387376 0.982950935262657 0.9950531131119696 0.9975665669163767 0.9598751277514436 0.9336142267439127 0.9672869196269421 1.1016877941996537 1.026171718317525 1.0246166709768594 1.1025515484957369 1.0 13.084265394970293 FLET(ph)DS(ph)EEEQEEVNEKK ddPTM_A549_PD325901_60min_R1 2 FLETDSEEEQEEVNEKK 17 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 2 FLET(1)DS(1)EEEQEEVNEKK;FLET(1)DS(1)EEEQEEVNEKK 107.89 3.6864000000000004e-09 11263800.0 4392.1 4838.200000000001 4773.0 5121.7 4880.5 5551.7 5290.9 6214.0 4874.200000000001 5112.6 5544.299999999999 True False 4837.982758706871 5245.932093664378 5096.924482380627 5438.055776775346 4537.710516810968 5506.488795860266 5492.248094791572 6090.0568952113035 4669.354324487087 4789.789563478226 4862.38624821343 0.994981170096159 1.0788801682696172 1.0482352125467969 1.1183923899039145 0.9332270792922392 1.1324663477492138 1.1295376003520021 1.2524831603924826 0.9603009892936276 0.9850697412691397 1.0 12.247448784414805 FLGS(ph)DEEDKDSLQELSTEQK ddPTM_A549_MK2206_60min_R1 2 FLGSDEEDKDSLQELSTEQK 20 1 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 FLGS(0.996)DEEDKDS(0.004)LQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK 157.88 2.4465e-27 13587400.0 3543.7999999999997 3868.6 3662.1 3856.6000000000004 5187.9 3975.6000000000004 3531.7 4538.0 5663.1 5499.4 6338.0 True False 4141.906802408418 4065.495215873401 4181.440846585006 4801.467173129354 4424.766782369576 4396.295353210303 4173.364174934735 5181.275397042137 4380.416892112408 4257.081720500823 4764.099680098777 0.8693996936526193 0.8533606534003312 0.8776980179596724 1.0078435581830232 0.9287729223746709 0.9227966768989082 0.8760026983415692 1.0875665382666198 0.9194637363300481 0.8935752831293737 1.0 12.217987883942978 -2.000000000000001 0.2447869769762419 0.9761859938797266 0.19914801458574702 0.21327881789918812 0.061259761719296556 42.29545178270841 0.5104272273613216 0.028173724534973434 13.65212842126183 0.00999999999999998 2.000000000000001 -0.7770379792939796 FLGS(ph)DEEDKDSLQELSTEQK ddPTM_A549_PD325901_60min_R1 2 FLGSDEEDKDSLQELSTEQK 20 1 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 FLGS(1)DEEDKDSLQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK 143.98 1.8989e-21 24959000.0 4633.4 3935.2 5175.4 5323.3 6062.799999999999 4869.3 5262.1 5884.700000000001 4759.3 5533.200000000001 5199.1 True False 5103.779357071197 4266.833114585604 5526.633766208404 5652.108150908528 5636.969843524539 4829.646035211273 5462.35209503161 5767.3250420421555 4559.283171911572 5183.8328076981825 4559.643659810338 1.119337329374439 0.9357821428447077 1.2120758064761334 1.239594269334554 1.2362742056380374 1.059215674632821 1.1979778470800106 1.2648631060529085 0.9999209394580669 1.1368942826365094 1.0 12.15470536556257 -8.792454489566508 24.220629286450293 0.9999625842768253 1.1558760222090223 0.1647987340353011 0.0991563020395616 108.02772741454089 84361.53657326328 0.016009800339602285 0.01704476615553134 1.6126700128281256e-09 8.792454489566508 0.15591343793219703 FLGSDEEDKDSLQELS(ph)TEQK ddPTM_A549_PD325901_60min_R1 2 FLGSDEEDKDSLQELSTEQK 20 1 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 FLGSDEEDKDSLQELS(0.844)T(0.156)EQK;FLGSDEEDKDSLQELS(0.845)T(0.155)EQK 172.61 5.441699999999999e-35 14490700.0 6906.799999999999 6691.799999999999 7070.9 6490.1 8264.0 6612.4 7307.2 8324.9 6840.7 7292.1 8159.299999999999 True False 7607.9732514825755 7255.7414708741435 7550.77379477586 6890.978736913463 7683.565149252296 6558.550806734234 7585.27949465327 8158.853338742292 6553.209168175049 6831.675561522425 7155.757826064217 1.0631960214991072 1.0139724746477228 1.055202534562144 0.9629977571087832 1.0737598079780715 0.9165417508744206 1.0600246233913282 1.14018019293839 0.9157952696925492 0.9547102805294289 1.0 12.804888847422472 FLHIMEDDS(ph)MEEKPLK ddPTM_A549_PD325901_60min_R1 1 FLHIMEDDSMEEKPLK 16 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 FLHIMEDDS(1)MEEKPLK 95.094 1.8781e-06 3867100.0 936.08 1211.2 1234.6 1315.8 1478.8 1394.7 1366.0 943.58 1146.3 1421.3 1246.2 True False 1031.1101524943251 1313.2720747067694 1318.3873802529065 1397.0739776013831 1374.9341895830455 1383.3420256113113 1417.983877503881 924.75955667581 1098.1249973656286 1331.558875439425 1092.925300312677 0.9434406470408663 1.2016119256559006 1.2062923054994943 1.2782886233868789 1.2580312572045755 1.2657242221545684 1.297420671932663 0.8461324451096921 1.0047575960145345 1.2183439024226785 1.0 10.093979083154716 -8.251703580742387 24.995787694326463 0.9906008505732249 1.2139375895428302 0.35354950969501897 0.12140928555657825 392.5624345335405 1007869.2641745423 0.015715904842467515 0.020159727037589517 5.6013978357712124e-09 8.251703580742387 0.22333673896960526 FLIATGERPR ddPTM_A549_MK2206_60min_R1 2 FLIATGERPR 10 1 E2QRB9;E9PIR7;F8W809;A0A087WSW9;A0A182DWI3;A0A087WSY9;Q16881-7;Q16881-5;Q16881-2;Q16881-4;Q16881-3;Q16881-6;Q16881;E9PKD3 E2QRB9 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ; 148.5 3.279e-08 9137300.0 1808.4699999999998 2651.8 2120.4 2144.91 3160.3 2356.04 2273.6 2741.9 3166.2 2652.9 3354.3999999999996 False True 2113.6955231535503 2786.765293246417 2421.1046042158437 2670.4130462886683 2695.424056424096 2605.354588987222 2686.683690044912 3130.5727217165822 2449.0607553824416 2053.608047480933 2521.409903269698 0.8382990486443975 1.1052408771904216 0.9602185670311753 1.059095168471317 1.0690146227032506 1.0332927564092877 1.065548162780233 1.241596107660614 0.9713060745127414 0.8144681453094429 1.0 11.300014959519773 -3.8876363150331135 12.977449380729636 1.0166796998202696 0.549499504856092 0.0 0.1143625083095731 0.0 0.0 0.012216299155229763 0.0 0.00012952800751291852 3.8876363150331135 -0.4671801949641776 FLIATGERPR ddPTM_A549_PD325901_60min_R1 2 FLIATGERPR 10 1 E2QRB9;E9PIR7;F8W809;A0A087WSW9;A0A182DWI3;A0A087WSY9;Q16881-7;Q16881-5;Q16881-2;Q16881-4;Q16881-3;Q16881-6;Q16881;E9PKD3 E2QRB9 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ; 155.06 1.6773e-08 13967100.0 3512.3 4494.200000000001 4474.4 4392.4 4805.9 4556.4 4132.1 4692.5 5168.6 4742.0 4338.0 False True 3868.866110381398 4872.942006396275 4778.0596907529625 4663.70857213582 4468.3501634549375 4519.294189069607 4289.349326671883 4598.904406304967 4951.381716290663 4442.58931072522 3804.45350084769 1.0169308442117524 1.280852034414538 1.2559122327788572 1.225855059365734 1.1745051325924527 1.1878957616547656 1.1274547910011652 1.2088212946433072 1.3014698997339353 1.1677338965334556 1.0 11.893473514148548 -10.970818575718987 1.230591222930537 0.9996617527448721 1.209853923972519 0.09407726259465499 0.08869499734582931 0.30490727776661647 0.8190248224479073 0.053894392590132637 0.012366357663385067 1.0695015646812194e-11 10.970818575718987 0.21019217122764688 FLIGNQHIY(ph)QPVGKPDPAAPPK ddPTM_A549_PD325901_60min_R1 1 FLIGNQHIYQPVGKPDPAAPPK 22 1 Q05397-2 Q05397-2 PTK2 Focal adhesion kinase 1 1 FLIGNQHIY(1)QPVGKPDPAAPPK 97.05799999999999 1.8861000000000002e-07 5736900.0 2173.4 2164.8 2773.9 2253.4 2667.4 2915.3 2609.2 2988.8 2915.2 2866.1 2695.6 True False 2394.0419680274845 2347.2352933662605 2962.153534815762 2392.587400157286 2480.0510260304413 2891.5587633646333 2708.4945338090242 2929.1860393317584 2792.684281881078 2685.1339568683147 2364.0582888162844 1.0126831387166064 0.9928838491294361 1.2529951350306816 1.012067854450106 1.0490650919069495 1.223133446854424 1.145697018818095 1.2390498378102348 1.1813094013343521 1.135815461729921 1.0 11.207049892068174 FLIPNASQAESK ddPTM_A549_MK2206_60min_R1 2 FLIPNASQAESK 12 0 P63104;E7EX29;E7ESK7;B0AZS6;P63104-2 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ; 169.58 3.5092e-15 10080100.0 7739.3 9537.2 8485.1 7780.9 11304.9 8858.8 7080.6 6908.7 11594.5 11818.400000000001 11005.6 False True 9045.504632281576 10022.602743325182 9688.414769492476 9687.220849297877 9641.96418551047 9796.232336004485 8367.053367229066 7888.029382006402 8968.36426261188 9148.615231764728 8272.605780892254 1.0934287057621594 1.2115412010173388 1.1711442592696006 1.1709999371265878 1.165529271052793 1.184177343326506 1.0114169088722882 0.9535120602780164 1.0841039087498479 1.105892807426633 1.0 13.014126118899263 -7.760433123490244 24.999501453625275 1.0309583892937757 1.1686216849616604 0.6789615327701225 0.04625765674809098 11.619462871217648 288668.4366523673 0.007014192594011301 0.010078469472203224 1.7360685775006574e-08 7.760433123490244 0.1376632956678847 FLIPNASQAESK ddPTM_A549_PD325901_60min_R1 2 FLIPNASQAESK 12 0 P63104;E7EX29;E7ESK7;B0AZS6;P63104-2 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ; 192.3 1.8338e-19 21166700.0 13430.099999999999 14483.5 14503.3 13589.599999999999 17400.9 15842.6 15190.5 15382.1 16599.4 15987.5 15640.2 False True 14793.513865282936 15704.075374847665 15487.581153427816 14428.998727779102 16178.720813846105 15713.58311819728 15768.582790060553 15075.291948475993 15901.78494396843 14978.046521556189 13716.554551396517 1.0785152940449445 1.1448994217902042 1.12911599595913 1.0519404617036316 1.1795032603285136 1.14559258006942 1.1496023094557017 1.0990582140717793 1.1593133599537524 1.091968574574089 1.0 13.74363051733872 -10.833748119396926 0.9682816861319782 0.9963794931480298 1.1288823489630604 0.2502624376364342 0.04411519125494395 0.2893077727568476 0.45944369095848064 0.02763453998764707 0.006086715628448355 1.4663980708281666e-11 10.833748119396926 0.13250285581503063 FLIVAHDDGR ddPTM_A549_MK2206_60min_R1 2 FLIVAHDDGR 10 0 Q16658 Q16658 FSCN1 Fascin 0 ; 73.067 0.0019652999999999997 910460.0 241.85 247.55 310.91 227.92 296.62 251.86 346.27 366.09 604.08 410.64 468.16 False True 282.6683673351984 260.1492376284599 355.00171311863215 283.7604102317175 252.987590930138 278.5116580288626 409.1827768085203 417.98437860360434 467.2568445175368 317.87613879813387 351.9029514413133 0.8032565972449336 0.7392641538326082 1.0088057280128713 0.8063598474224224 0.718912955671327 0.791444507322667 1.1627716537545425 1.1877831001179069 1.3278003000650054 0.9033062595701075 1.0 8.459033803924507 -7.763507592606564 24.84888070905523 1.1622694028502867 0.812612430891862 0.5819274985491236 0.12601264087290334 25.589012693723706 307445.3604733565 0.020943596908410356 0.0297245198218787 1.7238219538347158e-08 7.763507592606564 -0.3496569719584247 FLIVAHDDGR ddPTM_A549_PD325901_60min_R1 2 FLIVAHDDGR 10 0 Q16658 Q16658 FSCN1 Fascin 0 ; 88.681 0.00075102 4231200.0 751.8499999999999 726.47 870.4000000000001 835.71 1016.8 972.31 902.09 617.1 1115.06 808.2 967.41 False True 828.1772585172839 787.6921764466872 929.470578140394 887.329908664882 945.383475769571 964.3918297283531 936.4195285925889 604.7914563944153 1068.197905925603 757.1701140717249 848.4247029172585 0.9761352488554907 0.9284173053168465 1.0955251243209492 1.0458558144451124 1.1142809403343932 1.1366852313615439 1.1037155393669766 0.7128404610507867 1.2590367798729425 0.8924423245436395 1.0 9.728642817075755 -5.766163936982802 24.66906771821685 1.0900458299667917 0.9522762591069057 0.0 0.14272285730165532 143.5482818815637 749555.086215949 0.01960204256157789 0.06396163370055853 1.7133104469660235e-06 5.766163936982802 -0.13776957085988595 FLKPDVRLS(ph)R ddPTM_A549_MK2206_60min_R1 2 FLKPDVRLSR 10 2 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 1 FLKPDVRLS(1)R;FLKPDVRLS(1)R 47.47 0.010867 67317000.0 7010.5 8692.599999999999 8349.099999999999 7564.9 10117.0 8518.9 8802.0 7373.799999999999 12366.599999999999 10622.3 11135.4 True False 8193.701009730854 9135.01621090346 9533.12792447581 9418.30083960127 8628.802701908857 9420.364343611842 10401.209465066544 8419.058731315406 9565.58484540221 8222.715052492247 8370.172858594504 0.9789165825073196 1.0913772469494003 1.1389403881530573 1.1252217843900973 1.030898984726318 1.1254683150227895 1.242651692000192 1.0058404854411944 1.142818076400926 0.982382943746395 1.0 13.0310417019015 -10.937627731219902 1.1255899118698005 0.9984314391485326 1.1039586089799225 0.24888647374322903 0.07019143980255642 0.6040752473378652 1.3257891478158053 0.05105991415971812 0.011247580128279902 1.1544423993875846e-11 10.937627731219902 0.10552716983138988 FLKPDVRLS(ph)R ddPTM_A549_PD325901_60min_R1 2 FLKPDVRLSR 10 2 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 1 FLKPDVRLS(1)R;FLKPDVRLS(1)R 56.29 0.0050835 139868000.0 13196.2 12537.2 13493.3 12394.8 14064.400000000001 16035.4 14931.3 16340.0 17155.9 14487.6 14626.9 True False 14535.868509471007 13593.753843307226 14409.036479804421 13160.398645366784 13076.565063545975 15904.813018919924 15499.51879222087 16014.085881517987 16434.897184249316 13572.850463530724 12827.884027558572 1.1331462366079328 1.0597035188424926 1.1232590229884374 1.0259212366664572 1.0193859747603855 1.2398625513569566 1.2082677672266708 1.2483809369584564 1.2811853575337662 1.0580739921230746 1.0 13.646995595596119 -7.2493261431705465 24.883538608960542 1.1584899783709584 1.0718406551827486 0.24985030850311007 0.08466293342416946 1279.2733521659143 2627936.9368742537 0.01706237264169069 0.029413829669626475 5.632145383959583e-08 7.2493261431705465 -0.08664932318820973 FLKS(ph)PPLHK ddPTM_A549_MK2206_60min_R1 3 FLKSPPLHK 9 1 Q9NYF8-4;E9PJA7 Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 FLKS(1)PPLHK;FLKS(1)PPLHK;FLKS(1)PPLHK 69.01 0.0017721 38538000.0 3862.04 4321.299999999999 4390.33 4350.05 6564.0 5073.74 5048.5599999999995 5133.9 7304.2 5760.37 5838.21 True False 4513.857934187428 4541.2357122353615 5012.944810897448 5415.8124452811635 5598.444295278224 5610.639799123963 5965.818002380869 5861.646046909354 5649.8103624105925 4459.098416249288 4388.421330601055 1.0285835370254188 1.0348221763869188 1.1423116499643065 1.234114055438563 1.2757308092182296 1.2785098276685998 1.3594451291129257 1.335707218000082 1.2874357170342103 1.0161053555080028 1.0 12.09948632963473 -5.861376377616186 3.2947470285928833 1.194103436676386 1.0282822771352345 0.27465175283407584 0.11323658209341605 0.3346987129446667 7.062362271524859 0.020041571769206852 0.07563756658365832 1.376016439069273e-06 5.861376377616186 -0.16582115954115162 FLKS(ph)PPLHK ddPTM_A549_PD325901_60min_R1 2 FLKSPPLHK 9 1 Q9NYF8-4;E9PJA7 Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 FLKS(1)PPLHK;FLKS(1)PPLHK 69.01 0.0017721 33303000.0 2016.9 2077.98 2487.0 2633.5 2451.7 3071.7 2971.3 2357.11 2564.1 2865.2 3069.0 True False 2221.654203236696 2253.098667271445 2655.782775545909 2796.1653138875545 2279.5010499058385 3046.685093618888 3084.3744474577493 2310.0955919329776 2456.3397938979406 2684.2907830219083 2691.5324559939077 0.8254235234240567 0.837106259764361 0.9867177226979426 1.0388748267406676 0.8469156836022929 1.1319518316913004 1.145954766619664 0.8582826436993211 0.912617564179022 0.9973094610262371 1.0 11.39421210694276 -5.756467436852555 22.018674071280746 0.9745864832586058 0.8312644917567021 0.2964584885292396 0.09210077948537414 27.488452016203496 121712.16992703817 0.01277751452116745 0.0462688509815064 1.7519937927586343e-06 5.756467436852555 -0.1433219915019036 FLLGPPQGGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 FLLGPPQGGSPR 12 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 FLLGPPQGGS(1)PR;FLLGPPQGGS(1)PR 73.46600000000001 0.0011417 3105400.0 1922.0 2206.4 2213.6 2245.2 2719.2 2306.3 2270.8 2155.3 3157.3 2953.8 2943.3 True False 2246.38661161154 2318.6963357036325 2527.5217656537393 2795.274100790859 2319.2092821024585 2550.351135201963 2683.374966288699 2460.8203753294247 2442.176591172062 2286.5345284968043 2212.397379052499 1.0153630775740647 1.0480469547006324 1.1424357077914267 1.2634593257328788 1.0482788056346837 1.1527545455212025 1.2128810997949675 1.1122867883631815 1.1038598283903094 1.0335098703995282 1.0 11.111394822720715 -10.141696714047999 0.7495138674699816 1.004110707039697 1.1269438520278163 0.25199608110274285 0.06951876457158095 0.6008371376414054 0.6585752174442737 0.03816052866858401 0.01456742405874981 7.216112344906417e-11 10.141696714047999 0.12283314498811926 FLLGPPQGGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 FLLGPPQGGSPR 12 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 FLLGPPQGGS(1)PR;FLLGPPQGGS(1)PR 110.15 8.6913e-05 8605100.0 5232.1 5410.0 5672.7 6041.7 6651.5 6162.4 5905.4 5722.8 6305.9 6168.9 6795.0 True False 5763.258940331558 5865.919686396651 6057.683534716237 6414.882087303752 6184.321586429286 6112.215457537209 6130.133228558872 5608.65426455025 6040.884952357952 5779.394601208937 5959.258077053961 0.9671101445535486 0.9843372464406756 1.0165163945561047 1.0764564991746481 1.037767035168678 1.02566718516055 1.0286738968669378 0.9411665331538996 1.0136974895613757 0.9698178072640309 1.0 12.540917012131029 FLLHEPIVNK ddPTM_A549_PD325901_60min_R1 1 FLLHEPIVNK 10 0 B5MCF9;O00541;O00541-2 B5MCF9 PES1 Pescadillo homolog 0 55.567 0.018195 957250.0 441.95 379.94 577.28 416.55 644.62 842.5 587.44 698.6 688.58 552.54 500.5 False True 486.8164386536055 411.9588771995461 616.4576922666437 442.2793474463113 599.3441150182738 835.6389593299846 609.7953506595021 684.665874958902 659.6413772014523 517.6525301029334 438.9416729309057 1.109068627280317 0.9385276053850394 1.4044182411536053 1.0076039135065924 1.3654299693540768 1.90375854210936 1.3892400477443176 1.5598106016848303 1.50279961525842 1.1793196272444553 1.0 8.777885435312268 -5.761474928327879 24.999999999275175 1.319450339468613 1.0237980705667329 0.20238506917379717 0.24872144350189676 1.3638138811162692 962421.5154040814 0.04005069225932319 0.1374735801629881 1.7319090103798824e-06 5.761474928327879 -0.2956522689018801 FLMECRNS(ph)PVTK ddPTM_A549_MK2206_60min_R1 4 FLMECRNSPVTK 12 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 FLMECRNS(0.993)PVT(0.007)K;FLMECRNS(0.99)PVT(0.01)K;FLMECRNS(0.997)PVT(0.003)K;FLMECRNS(0.927)PVT(0.073)K 91.81200000000001 7.4945e-05 85480000.0 10018.0 12347.4 13715.5 11369.599999999999 14681.400000000001 12561.100000000002 13013.400000000001 12305.899999999998 16624.5 14485.8 13980.300000000001 True False 11708.793483415404 12975.829919990503 15660.564138427846 14155.15251040073 12521.78550833298 13890.30726461665 15377.766331821987 14050.299010238177 12859.07729387133 11213.447719174972 10508.605673348848 1.114209995823745 1.2347813138425061 1.490260899040585 1.3470057732111869 1.1915744007875193 1.3218030722995178 1.4633498305890331 1.3370279033184689 1.2236711218961784 1.0670728417960997 1.0 13.35928363861242 -9.87051494574563 0.7679992666853315 1.019191318407322 1.315897670770637 0.48812445036708707 0.10655052788737025 0.3387329574631492 0.4128143162478418 0.047738866924558816 0.02344504468578563 1.347364356550215e-10 9.87051494574563 0.2967063523633149 FLMECRNS(ph)PVTK ddPTM_A549_PD325901_60min_R1 6 FLMECRNSPVTK 12 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 FLMECRNS(0.987)PVT(0.013)K;FLMECRNS(0.973)PVT(0.027)K;FLMECRNS(0.994)PVT(0.006)K;FLMECRNS(0.972)PVT(0.028)K;FLMECRNS(0.974)PVT(0.026)K;FLMECRNS(0.971)PVT(0.029)K 102.29 5.9439e-05 182325000.0 34413.2 32419.4 37275.8 30593.0 31620.800000000003 28521.4 30805.5 32525.7 25270.3 30786.4 33146.3 True False 37906.80273034114 35151.49661389421 39805.55994559475 32482.66012825588 29399.86409383798 28289.13117464004 31977.8201599164 31876.949397581982 24208.277170835434 28842.54144996012 29069.515231707675 1.3040053275121068 1.209221974763191 1.3693231424161039 1.1174132031216435 1.0113640994525417 0.9731545555250116 1.1000465575372402 1.0965765732072508 0.832771959830626 0.9921920341657441 1.0 14.827219392590758 -6.658802407128246 0.6946007528824552 0.9361860826451275 1.3326250731261993 0.6413260476760496 0.08893577696567344 0.4202124572965549 0.33370561165590445 0.018359464428940542 0.09130456255582173 2.1938028324539843e-07 6.658802407128246 0.3964389904810718 FLMPEAYPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 FLMPEAYPSSPR 12 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FLMPEAY(0.009)PS(0.495)S(0.495)PR 46.706 0.036982999999999995 1102600.0 1621.0 1669.7 1899.5 1721.2 2437.3 1797.7 1433.0 1777.9 2631.4 2226.1 2719.9 True False 1894.5851703549977 1754.6805981346793 2168.8776625674386 2142.8940772676056 2078.776398671788 1987.9314207833172 1693.3575509475543 2029.9227695903978 2035.392101482331 1723.222463906405 2044.4737645788377 0.9266859781618586 0.8582553753122599 1.0608488600557944 1.0481396799479314 1.0167782217053865 0.9723438154232474 0.8282608367422052 0.9928827675656491 0.9955579458861985 0.8428684651091081 1.0 10.997513834464563 -6.666056173364327 0.006139545905566065 1.9352089589066883 1.8794155268046704e-05 0.0 0.08417480704933522 21639.900826623485 32.517797670373696 4984.425477694644 5266.729494832475 2.1574653360134443e-07 6.666056173364327 -1.9351901647514202 FLMPEAYPS(ph)SPRK ddPTM_A549_MK2206_60min_R1 3 FLMPEAYPSSPRK 13 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FLMPEAY(0.007)PS(0.497)S(0.497)PRK;FLMPEAY(0.024)PS(0.488)S(0.488)PRK;FLMPEAYPS(0.5)S(0.5)PRK 72.175 0.00077543 6412900.0 4081.1 4942.9 4533.8 4341.5 7564.6 5589.9 4734.4 4852.700000000001 6737.4 7152.0 6579.4 True False 4769.88990668463 5194.472497167099 5176.76101423967 5405.167694897342 6451.85736076503 6181.419507724685 5594.579196933776 5540.58508577047 5211.389657416984 5536.3582327202785 4945.553397797711 0.9644805187643297 1.0503319000620301 1.0467506056137048 1.0929348568563226 1.3045774338698044 1.2498944022073069 1.1312342112057834 1.12031650254504 1.0537525810028967 1.1194618250781918 1.0 12.271916249445848 -8.999814641153723 1.6594340861288686 1.0183819981154978 1.1259321728409355 0.04191986459338293 0.0941813740268741 0.42164722231225504 2.3438684833047523 0.01986402813244858 0.01956732557964051 1.0004268956102994e-09 8.999814641153723 0.10755017472543771 FLMPEAYPS(ph)SPRK ddPTM_A549_PD325901_60min_R1 3 FLMPEAYPSSPRK 13 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FLMPEAY(0.002)PS(0.499)S(0.499)PRK;FLMPEAY(0.002)PS(0.499)S(0.499)PRK;FLMPEAYPS(0.5)S(0.5)PRK 65.704 0.0022177 12960500.0 5433.700000000001 6002.0 6768.9 6523.200000000001 7595.1 7269.299999999999 6366.299999999999 6368.9 7493.799999999999 6661.5 7304.099999999999 True False 5985.32522392148 6507.809604020833 7228.278258702334 6926.123248737909 7061.646377672569 7210.101230928733 6608.573030273027 6241.867293194604 7178.861646391478 6240.891753141298 6405.742004504754 0.9343687616067551 1.0159337668367383 1.128406085293342 1.0812366848160921 1.1023931923431445 1.1255684705781663 1.0316639392634974 0.9744175286493107 1.1206916609103266 0.9742652371501183 1.0 12.645149978447968 -5.402713909613454 3.661304623639768 1.0638520687536588 0.9353746687502166 0.2976066301801691 0.05596635402505821 0.22852731114619504 4.9331603160924775 0.007879450228380647 0.0604602841762618 3.956271526277529e-06 5.402713909613454 -0.1284774000034422 FLNRS(ph)PEESFDIK ddPTM_A549_MK2206_60min_R1 2 FLNRSPEESFDIK 13 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 FLNRS(1)PEESFDIK;FLNRS(1)PEESFDIK 74.296 0.00032283 5417200.0 1869.81 1942.88 1921.6100000000001 1497.33 2544.3 1975.1100000000001 2411.34 2021.0 2457.7 2706.7 2809.8 True False 2185.3882155345354 2041.7642932885587 2194.1231930330164 1864.1759172176985 2170.0368404138303 2184.11482922809 2849.4492651094706 2307.4829390529235 1901.0348741404293 2095.2545901152093 2112.0491134650597 1.0347241461393644 0.9667219764311301 1.0388599294612542 0.8826385264115868 1.0274556716409096 1.0341212310374726 1.3491396800118067 1.092532803494911 0.900090278214015 0.99204823257055 1.0 11.044427668093604 -8.756962584813923 24.994101536288653 0.9528204087425893 1.0525839645703106 0.1126525087993887 0.11029703025012756 174.92176424914814 976593.5377476991 0.020192205878066933 0.022515779763777884 1.749997447297586e-09 8.756962584813923 0.09976355582772123 FLNRS(ph)PEESFDIK ddPTM_A549_PD325901_60min_R1 2 FLNRSPEESFDIK 13 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 FLNRS(1)PEESFDIK;FLNRS(1)PEESFDIK 52.861999999999995 0.0064637 11371900.0 2775.7 2699.0 2360.6 2880.5 2643.3 3019.0 2515.19 2966.1 2484.9 2489.8 3373.8 True False 3057.48702063766 2926.454202141323 2520.804511440962 3058.421942909852 2457.6437268899554 2994.41426494626 2610.906931814778 2906.938808639565 2380.46829447252 2332.5936030880744 2958.843988280302 1.0333383688859819 0.9890532294817599 0.8519558724372179 1.0336543444074675 0.830609432813777 1.0120216803612656 0.8824077721422051 0.982457615255712 0.8045264650320623 0.7883462637189573 1.0 11.530817913850873 -5.56619871626774 7.525279296809134 0.9167105318767551 1.022675210974542 0.18548144218788476 0.0831139400642154 0.23668590329322142 34.172569417490145 0.011272003903504944 0.04470439526055566 2.715196616172588e-06 5.56619871626774 0.10596467909778695 FLPGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 FLPGSPR 7 0 Q3MIP1 Q3MIP1 ITPRIPL2 Inositol 1,4,5-trisphosphate receptor-interacting protein-like 2 1 FLPGS(1)PR;FLPGS(1)PR 103.83 0.005730300000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FLPGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 FLPGSPR 7 0 Q3MIP1 Q3MIP1 ITPRIPL2 Inositol 1,4,5-trisphosphate receptor-interacting protein-like 2 1 FLPGS(1)PR;FLPGS(1)PR 75.738 0.017996 16201800.0 1635.1100000000001 1422.58 1600.02 1526.3600000000001 1560.37 1479.06 1687.6599999999999 1691.26 1447.45 1721.8400000000001 1869.6200000000001 True False 1801.105163495638 1542.4658091449437 1708.6069789018766 1620.639790584927 1450.7749941842694 1467.0150257407806 1751.8848248229872 1657.5264925321967 1386.6187101429641 1613.122728548948 1639.6685924976628 1.098456829469462 0.9407180305840629 1.0420440976424399 0.9883947268369947 0.8847976968164909 0.8947021565535487 1.068438361775527 1.0108911642976166 0.8456701046098379 0.9838102259992197 1.0 10.679188533483893 -2.000000000000581 0.5363547787656637 0.9385160872686729 6.567220755064514 0.16374204568582207 0.06921954684860533 135.00201216966965 1.1633853952578495 0.014184994038786584 875.2161614209755 0.009999999999986625 2.000000000000581 5.628704667795841 FLPISST(ph)PQPER ddPTM_A549_MK2206_60min_R1 2 FLPISSTPQPER 12 0 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 FLPIS(0.004)S(0.071)T(0.925)PQPER;FLPIS(0.017)S(0.141)T(0.842)PQPER 160.52 5.9133e-14 37388000.0 2634.16 2368.54 2996.62 6315.1 3425.04 2447.56 2222.6 3122.0 3928.7000000000003 3980.5 3711.8999999999996 True False 3078.7418089712046 2489.0885691476983 3421.5857758372413 7862.299783495611 2921.2211531230523 2706.5591746411615 2626.4176501996035 3564.5530607240103 3038.8557228447326 3081.3022854226874 2790.132786771639 1.1034391709125444 0.892103981913969 1.2263164649580114 2.8178944818582603 1.0469828414521771 0.9700467259025412 0.9413235322174525 1.2775567806750963 1.0891437630683096 1.104356860731331 1.0 11.446118068457872 -6.919490351944048 23.908597594101423 1.0478991431858822 1.5064013994694023 0.17457361686116346 0.46861364116024784 28.770880972345275 8541.176240020399 0.06695219781908802 0.12652776716938585 1.2036761297249158e-07 6.919490351944048 0.45850225628352015 FLPISST(ph)PQPER ddPTM_A549_PD325901_60min_R1 2 FLPISSTPQPER 12 0 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 FLPISS(0.016)T(0.984)PQPER;FLPISS(0.064)T(0.936)PQPER 194.39 2.4113000000000002e-24 65387000.0 6653.0 6511.5 6650.700000000001 6865.5 8999.7 7018.700000000001 7261.700000000001 8564.8 7722.8 8352.400000000001 8269.400000000001 True False 7328.407662320256 7060.246957111238 7102.056495907993 7289.566342318206 8367.59211927951 6961.54203424257 7538.047967254712 8393.968345044375 7398.237572760426 7825.028038570504 7252.316224045625 1.0104920188149469 0.9735161483585663 0.9792811395014142 1.0051363064049903 1.1537820278073507 0.9599060243899775 1.0393986878649502 1.1574189659868268 1.0201206544511927 1.0789695039256573 1.0 12.824226117206386 -6.528526782177308 24.99811222893037 1.02980241884818 0.9873167729737318 0.12214778573879481 0.060921681861831646 288.118294326504 1275202.3661993733 0.008623127127508285 0.017991504847745168 2.9612373454615824e-07 6.528526782177308 -0.04248564587444825 FLPISST(ph)PQPERR ddPTM_A549_PD325901_60min_R1 2 FLPISSTPQPERR 13 1 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 FLPIS(0.013)S(0.132)T(0.855)PQPERR;FLPIS(0.012)S(0.107)T(0.881)PQPERR 130.61 2.5999e-08 40349000.0 2837.7 2612.8 3245.9 2961.1 3433.2 3967.6000000000004 3279.8999999999996 3622.1 4289.5 3671.6 4302.2 True False 3125.78121499567 2832.989825622399 3466.1862931823334 3144.00042185397 3192.0638758970194 3935.289181053586 3404.7183893301485 3549.8543740175182 4109.227232138067 3439.774549400826 3773.0566738927937 0.8284479892984732 0.7508474084751834 0.9186679641379859 0.8332767550534022 0.8460153535418953 1.042997633267303 0.9023766891413751 0.9408431096676346 1.0890976699532144 0.9116678721530814 1.0 11.881518055239479 -7.321817196639416 0.6689391905086398 1.0387642193146238 0.805286927675854 0.42318881228066774 0.07264682005755611 0.3425485732676821 0.29656993260694897 0.013271952738313744 0.03612566824006567 4.7663156848747896e-08 7.321817196639416 -0.23347729163876985 FLPLNIRNS(ph)PFTR ddPTM_A549_MK2206_60min_R1 2 FLPLNIRNSPFTR 13 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 FLPLNIRNS(0.933)PFT(0.067)R;FLPLNIRNS(0.96)PFT(0.04)R 72.898 0.00040953 78775000.0 2112.21 2698.8999999999996 2349.5 2589.0 3666.5 2622.6 2615.6000000000004 2459.8 3588.7 3821.7 3492.6 True False 2468.6994094235233 2836.262482066052 2682.6944291667273 3223.305116224627 3127.16270698318 2900.121791259015 3090.820663125208 2808.4841828215635 2775.8651799763034 2958.375315714077 2625.291029143736 0.9403526626260226 1.0803611678020804 1.0218655377197223 1.2277896356793399 1.191168016143008 1.104685826852849 1.1773249627616746 1.0697801316669937 1.0573552223966873 1.1268751855976056 1.0 11.358261647642456 -9.188669671228798 1.0932620198314398 1.0151818097969065 1.1085497050328832 0.0 0.08344925074129743 0.508437012755763 1.2664694445827465 0.019037709212189627 0.016502262251637177 6.47635026203526e-10 9.188669671228798 0.09336789523597666 FLPLNIRNS(ph)PFTR ddPTM_A549_PD325901_60min_R1 2 FLPLNIRNSPFTR 13 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 FLPLNIRNS(0.969)PFT(0.031)R;FLPLNIRNS(0.984)PFT(0.016)R 59.261 0.0027155 153683000.0 1555.6799999999998 1625.55 1285.7 1645.07 1778.02 1902.8000000000002 1928.49 1684.79 1863.6399999999999 1661.72 1232.08 True False 1713.6114883689136 1762.5408033682202 1372.9553335421697 1746.6822376749558 1653.1380090360078 1887.3042276713286 2001.8797422602197 1651.1855417578126 1785.3176917826738 1556.79871560909 1080.5419707986227 1.5858814693726266 1.631163666937931 1.270617311169714 1.6164871748424472 1.5299155920932737 1.7466274135343693 1.8526626418598449 1.5281086587848414 1.652242800400576 1.4407572844750016 1.0 10.077539395625863 -10.671801626462385 0.8200890669510259 0.9789892582718879 1.6032454721822842 0.2912369652969534 0.18703321755919736 0.29487872034679186 0.334242224850118 0.11657106705560417 0.027096104820483666 2.1291113422477297e-11 10.671801626462385 0.6242562139103963 FLQEHGSDS(ph)FLAEHK ddPTM_A549_MK2206_60min_R1 2 FLQEHGSDSFLAEHK 15 0 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 FLQEHGS(0.046)DS(0.954)FLAEHK;FLQEHGS(0.493)DS(0.507)FLAEHK 62.765 0.0056898999999999995 3072200.0 322.19 439.59 544.73 373.52 593.28 509.15 573.0899999999999 588.48 563.09 648.3399999999999 1000.04 True False 376.5677952107817 461.96325335930015 621.9809050436222 465.0324167679502 506.0092979132635 563.0279150535832 677.2130348028843 671.8988421444154 435.5510140699576 501.87954370831403 751.7024683000918 0.5009532509083763 0.6145559883606461 0.8274296430743092 0.6186389381154749 0.6731510394765078 0.7490036800422123 0.9009056952205322 0.8938361525722468 0.5794194278155258 0.6676571713849363 1.0 9.554017930870343 -10.97306992383799 1.1562120093206485 1.0053047148561671 0.7029856156988453 0.0 0.15589977081134046 0.4054429887167689 0.9352874571813505 0.10090257290944431 0.021620547275786915 1.0639716990450571e-11 10.97306992383799 -0.3023190991573218 FLQSYPGRGS(ph)GSDDTELR ddPTM_A549_MK2206_60min_R1 1 FLQSYPGRGSGSDDTELR 18 1 P39880-9;Q13948-9;Q13948-10;Q13948-2;Q13948 P39880-9 CUX1 Homeobox protein cut-like 1;Protein CASP 1 FLQS(0.011)Y(0.001)PGRGS(0.905)GS(0.082)DDTELR 54.223 0.0033263000000000004 3030800.0 1014.1 1288.8 1278.7 1190.5 1492.8 1004.0 981.92 955.38 1547.1 1655.8 1743.2 True False 1185.2552876354127 1354.3944150901211 1460.0388876677982 1482.172553443576 1273.211097500202 1110.242613598738 1160.3221538216483 1090.8080407285408 1196.684320211033 1281.7536299969565 1310.3153301275145 0.9045572927243922 1.033640058960706 1.114265287215798 1.1311571492484462 0.9716829744915664 0.8473094896101794 0.8855289464626278 0.8324775080074717 0.9132796455144707 0.9782024223682261 1.0 10.35569832578929 -6.986761052159142 23.555543472917453 0.9334396066697269 1.050100372210087 0.41170295533695644 0.0731677156675634 111.94939461425176 199184.24494785618 0.011793733501354558 0.02227654919770723 1.0309531925392489e-07 6.986761052159142 0.11666076554036009 FLREPVVTPQDLEGPGRAES(ph)KESVGSR ddPTM_A549_MK2206_60min_R1 1 FLREPVVTPQDLEGPGRAESKESVGSR 27 3 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 FLREPVVTPQDLEGPGRAES(0.64)KES(0.166)VGS(0.194)R 61.228 0.00011599999999999999 15591000.0 505.46 1129.3 577.87 560.32 1028.3 741.79 878.46 860.08 1184.1 1115.6 1003.6 True False 590.7692906894741 1186.7765463697024 659.820655366068 697.5984251537203 877.0384321807725 820.2857254396494 1038.0648110295795 981.998973884532 915.9032406191483 863.5851851821508 754.3784220490905 0.7831206108530903 1.573184640072425 0.8746547304121203 0.9247327399143512 1.1625974531436158 1.0873663687404223 1.3760531593810994 1.3017325856393984 1.214116435265094 1.1447639009032442 1.0 9.559144600082556 -7.556009317419018 24.999202838510502 1.144621812177437 1.078869884609968 0.06077896909548397 0.21495800006935792 796.707148324837 601165.4125665661 0.033144071377041055 0.04916073194408985 2.7796536320132283e-08 7.556009317419018 -0.06575192756746895 FLREPVVTPQDLEGPGRAES(ph)KESVGSR ddPTM_A549_PD325901_60min_R1 4 FLREPVVTPQDLEGPGRAESKESVGSR 27 3 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 FLREPVVTPQDLEGPGRAES(0.89)KES(0.055)VGS(0.055)R;FLREPVVTPQDLEGPGRAES(0.657)KES(0.161)VGS(0.182)R;FLREPVVTPQDLEGPGRAES(0.637)KES(0.139)VGS(0.225)R;FLREPVVTPQDLEGPGRAES(0.956)KES(0.018)VGS(0.026)R 75.068 1.2877000000000002e-06 92880000.0 4614.79 4929.55 4547.72 5180.35 6036.93 6314.45 5703.27 5806.0 6230.839999999999 6122.63 5649.6900000000005 True False 5083.280083571156 5344.980478757232 4856.355626861936 5500.328454071533 5612.916863077888 6263.027212749227 5920.3110607990975 5690.194775281109 5968.979463129765 5736.046096905425 4954.813946335684 1.0259275400906787 1.0787449411112793 0.9801287554810081 1.1100978792834961 1.1328209139374248 1.2640287366150302 1.1948604175495718 1.1484174455206888 1.2046828655481814 1.1576713392331308 1.0 12.274615169775494 -6.410418536263422 6.498306111259624 1.125093086796693 1.0337265662075479 0.3439124475083293 0.06928231322951847 0.35243441106299456 17.99084839958875 0.013294334996403381 0.031095782920675073 3.88670396816206e-07 6.410418536263422 -0.09136652058914518 FLREPVVTPQDLEGPGRAESKESVGS(ph)R ddPTM_A549_MK2206_60min_R1 1 FLREPVVTPQDLEGPGRAESKESVGSR 27 3 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 FLREPVVTPQDLEGPGRAES(0.19)KES(0.329)VGS(0.481)R 77.31 1.7562e-06 9255400.0 1310.8 1044.4 1266.2 1157.8 1388.4 1120.5 1595.1 1287.8 1862.4 1735.7 1946.9 True False 1532.030994016861 1097.5554990069224 1445.7661997067075 1441.4610519756163 1184.1681992023587 1239.070566272297 1884.9090226911667 1470.3495937220948 1440.5693736416708 1343.604164503997 1463.4309982935174 1.0468761395674528 0.7499878711649294 0.9879291892768375 0.9849873712231599 0.8091725544854507 0.8466887524708419 1.2880067627986067 1.0047276540107768 0.9843780645083334 0.9181192458481141 1.0 10.515139008019544 FLRPEDPTRPSR ddPTM_A549_PD325901_60min_R1 1 FLRPEDPTRPSR 12 2 O15067 O15067 PFAS Phosphoribosylformylglycinamidine synthase 0 64.199 0.002195 1591600.0 503.62 594.14 456.42 581.32 419.42 657.52 577.58 492.3 596.02 850.9 739.01 False True 554.7471316545516 644.2102629345111 487.39540587642307 617.2268161264902 389.96138612044996 652.1653751200613 599.5601229639037 482.48069029812103 570.9713521153816 797.1740287844974 648.1164549703675 0.8559374282202342 0.9939730090080262 0.752018255575238 0.9523393695577601 0.6016841311925638 1.006247210850215 0.925080852933006 0.7444351807426036 0.8809703067043514 1.2299857883116776 1.0 9.340109252750706 -10.221215129452029 0.7554171347782775 0.9973920213009833 0.8563495239741017 0.27816482155574906 0.13545574725593804 0.818261326201909 0.893484785367722 0.061328961420165 0.02184996058490398 6.00876017490754e-11 10.221215129452029 -0.14104249732688157 FLS(ph)ITEK ddPTM_A549_PD325901_60min_R1 2 FLSITEK 7 0 Q15147-2;Q15147;Q15147-5;Q15147-4 Q15147-2 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 1 FLS(0.988)IT(0.012)EK;FLS(1)ITEK 80.23899999999999 0.015958 2501500.0 1366.73 1150.46 1193.87 1348.78 1188.3899999999999 1371.88 1343.54 1754.3000000000002 1189.29 1277.15 1567.8 True False 1505.4794234665515 1247.4133017397205 1274.8931975235191 1432.091077298368 1104.9215861229352 1360.7078641253647 1394.6691499132974 1719.3091102782735 1139.30827716738 1196.5105310402168 1374.9705391030461 1.094917585978709 0.9072291123804465 0.9272149193503362 1.0415430997034918 0.8035965533077707 0.9896269232161253 1.0143265693700618 1.250433417576972 0.8286055917318789 0.8702081222923899 1.0 10.42518499163009 FLS(ph)LEYSPAGK ddPTM_A549_MK2206_60min_R1 2 FLSLEYSPAGK 11 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 FLS(1)LEYSPAGK;FLS(1)LEYSPAGK 131.43 8.443e-08 5463100.0 4827.4 5097.5 5321.700000000001 4707.799999999999 6916.4 5161.1 4874.3 4567.799999999999 6604.0 6746.5 7253.700000000001 True False 5642.147101401431 5356.940976817113 6076.3970818031785 5861.211211341171 5899.006722099677 5707.244176339089 5759.89721603884 5215.299638300811 5108.20454442096 5222.460964352257 5452.406098064457 1.0347994995098275 0.982491193882049 1.1144432334121686 1.0749770112357984 1.0819089070041497 1.0467386459649615 1.0563954908060753 0.95651342627472 0.9368716219128129 0.9578268511962401 1.0 12.412677303489913 -8.256395819934454 23.87924139517337 0.9683307358853108 1.0567623492302907 0.6348705663573246 0.0338888391046692 130.07609530029725 615858.1283833525 0.006196653052733985 0.007867108972669963 5.541204523313325e-09 8.256395819934454 0.08843161334497984 FLS(ph)LEYSPAGK ddPTM_A549_PD325901_60min_R1 2 FLSLEYSPAGK 11 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 FLS(0.998)LEYS(0.002)PAGK;FLS(1)LEYSPAGK 130.01 9.762900000000001e-08 9491800.0 9843.8 10383.5 10214.0 11788.3 13154.8 11336.400000000001 11200.1 12328.599999999999 11980.5 11919.2 12872.6 True False 10843.135329377446 11258.553985896424 10907.183461771574 12516.43651782823 12230.852229596325 11244.080116971443 11626.32593442989 12082.696401400402 11477.001248311017 11166.619677856597 11289.35180613462 0.9604745706910559 0.9972719584997377 0.9661478930831638 1.1086939917158762 1.0833972082391918 0.9959898770150314 1.0298488464246598 1.0702737064881511 1.016621808355235 0.9891285053043231 1.0 13.462675033692165 FLSHS(ph)TDSLNK ddPTM_A549_MK2206_60min_R1 2 FLSHSTDSLNK 11 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 FLSHS(0.981)T(0.019)DSLNK;FLS(0.001)HS(0.5)T(0.5)DSLNK 129.37 3.1824e-08 12008300.0 2748.8999999999996 3196.7 2405.4 2393.7 2785.5 2529.7 2190.1 2760.2 4429.0 4805.4 5195.9 True False 3212.847115847537 3359.39837579034 2746.5218897287273 2980.1566074572775 2375.756639929539 2797.3911749210442 2588.0128208864166 3151.466802757979 3425.838571659666 3719.8568025047557 3905.61463045523 0.8226226650203465 0.8601458908911287 0.7032239863892047 0.7630442041615143 0.6082926414203405 0.7162486419186181 0.6626390634410245 0.8069067486032668 0.8771573480254906 0.9524382599087041 1.0 11.931333889247968 -9.05286266108464 1.0923329152536188 0.9659412529347083 0.733491254208692 0.6394336373811204 0.06933620840600585 0.19854174950299486 0.48776920917248584 0.017579294508979822 0.01625218792449628 8.853955582201862e-10 9.05286266108464 -0.23244999872601635 FLSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 FLSSPR 6 0 Q6ZU80;H0YJH2 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 FLS(0.216)S(0.784)PR 63.148 0.0603 4911900.0 1120.7 1184.8 1162.3 920.02 1326.1 988.39 866.75 1071.9 1713.2 1310.6 1784.4 True False 1309.846761515637 1245.1012593100365 1327.1316173741152 1145.4249413012665 1131.0324466740478 1092.980773759817 1024.2272556062749 1223.8451075560752 1325.16293541823 1014.5345497487684 1341.2842330653607 0.9765616632368243 0.9282903866427265 0.9894484589154521 0.8539762960483932 0.8432459122323349 0.814876330322565 0.7636168608837769 0.9124427749061874 0.9879806999518013 0.7563904239969771 1.0 10.389399277446957 -8.696221649111678 4.1014458018048705 0.9946722743594247 0.8797818935173212 0.0 0.09558095374859692 0.17326404360586142 5.788480418023992 0.011758731055758273 0.013168468006298705 2.012696775808035e-09 8.696221649111678 -0.11489038084210357 FLSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 FLSSPR 6 0 Q6ZU80;H0YJH2 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 FLS(0.058)S(0.942)PR;FLS(0.044)S(0.956)PR 74.335 0.046442000000000004 19129800.0 2531.13 2310.0299999999997 2682.14 2707.6000000000004 2707.9 2584.1 2383.33 2805.4 2715.7 2943.6 2993.1 True False 2788.088454280578 2504.7043351509906 2864.166149418055 2874.842302594244 2517.706445747858 2563.0559463556256 2474.0289273582175 2749.444096206276 2601.568573101142 2757.7405936420805 2624.9676748241645 1.0621420145554137 0.9541848302260598 1.0911243505541124 1.095191506610388 0.9591380762113608 0.9764142891882712 0.9424988166850253 1.0474201730466832 0.9910859467156715 1.0505807824192768 1.0 11.358083941475888 -6.771703691495442 24.99759169911545 0.9919672014055035 1.0466598116508439 0.24603862846475144 0.04618776275917484 204.71804557431892 498568.59807919216 0.00598973571158461 0.011411490063814384 1.6915946716916305e-07 6.771703691495442 0.054692610245340334 FLSVLER ddPTM_A549_PD325901_60min_R1 2 FLSVLER 7 0 P07099 P07099 EPHX1 Epoxide hydrolase 1 0 ; 79.469 0.045169 5460100.0 1874.38 2181.1099999999997 2132.52 2021.6 2431.0 2755.2 2245.94 2416.4 2717.8999999999996 2566.4 2577.13 False True 2064.6656777543735 2364.9197943062104 2277.2456310845055 2146.469640613281 2260.254946494714 2732.762564683649 2331.410475725524 2368.2030063708726 2603.676114751848 2404.357066015436 2260.159347773079 0.9135044747126684 1.0463509117781236 1.0075597693269998 0.9496983665015409 1.0000422973370127 1.2091017243435616 1.0315248250184874 1.0478035580563152 1.1519878531207255 1.0637998017194823 1.0 11.142208775062658 -7.028268907350825 24.91858340417138 1.0777908836986212 0.9846869669153038 0.3928543243940471 0.06226880404583241 681.909335306119 601091.3606843277 0.010552866740249765 0.018304216002001963 9.369816650406678e-08 7.028268907350825 -0.09310391678331742 FLT(ph)LGSK ddPTM_A549_MK2206_60min_R1 1 FLTLGSK 7 0 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;J3KT37;O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3 Q9Y2J2;O43491 EPB41L3;EPB41L2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Band 4.1-like protein 2 1 FLT(1)LGSK 76.827 0.018549 5063800.0 967.24 887.27 1130.4 896.49 1361.3 1283.3 1043.8 1119.1 1602.7 1401.8 1473.7 True False 1130.486465252418 932.4282531634161 1290.7077176974105 1116.130090244966 1161.0545733032056 1419.0979542144034 1233.4449488339537 1277.7358521000128 1239.691008985989 1085.1324064076182 1107.739617949127 1.0205344712193327 0.8417395550858034 1.1651724798712457 1.0075744084258473 1.0481295012746643 1.281075381994305 1.1134791325036817 1.1534622680243372 1.1191176959808995 0.9795915834595101 1.0 10.11340309020091 -5.763362751746246 24.99921841027212 1.0842419781857984 0.931137018153011 0.3171302720643727 0.09213133972409362 43.82329846634834 569637.4198075288 0.012697809636049039 0.04262079066959542 1.7243969588256375e-06 5.763362751746246 -0.1531049600327874 FLT(ph)LGSK ddPTM_A549_PD325901_60min_R1 2 FLTLGSK 7 0 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;J3KT37;O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3 Q9Y2J2;O43491 EPB41L3;EPB41L2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Band 4.1-like protein 2 1 FLT(0.988)LGS(0.012)K;FLT(1)LGSK 80.23899999999999 0.016912 23139400.0 4380.8 4210.4 4576.6 4338.9 5101.5 4590.3 5647.3 4885.8 4792.7 5099.700000000001 5458.1 True False 4825.535591025489 4565.225184400082 4887.195597331484 4606.90399864314 4743.188239219575 4552.9181187091135 5862.211091821132 4788.348886164047 4591.279486063201 4777.704071679755 4786.78830174661 1.0080946318985406 0.953713616859621 1.020975921485443 0.9624206687732912 0.9908915832958131 0.9511425681908344 1.2246647903108896 1.0003260191007126 0.95915657778054 0.9981022285728531 1.0 12.224842288176665 -4.9620383968277055 16.858553712521953 0.995294756275271 1.0639466585119934 0.0 0.07349083923921959 11909.821883210487 5677.372849417463 0.009613805551121995 25850.762606730194 1.0913438443316038e-05 4.9620383968277055 0.06865190223672246 FLTLGS(ph)KFR ddPTM_A549_PD325901_60min_R1 1 FLTLGSKFR 9 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;J3KT37;O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3 Q9Y2J2;O43491 EPB41L3;EPB41L2 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Band 4.1-like protein 2 1 FLT(0.008)LGS(0.992)KFR 43.628 0.018333000000000002 1244800.0 955.36 771.66 655.32 749.5 1020.2 746.52 897.48 822.36 584.93 760.98 776.96 True False 1052.3474439011395 836.6904963410059 699.7939559592867 795.7949127619977 948.5446714989341 740.440588627917 931.6340925198999 805.9573846710606 560.3474262488675 712.9315929303406 681.3988455552384 1.544392760224936 1.2279012531335125 1.026996098575804 1.1678841517753726 1.3920550022740525 1.0866478472304548 1.3672375563841133 1.1827982831616417 0.8223486580642324 1.0462764907525015 1.0 9.412355692957233 -8.658641362986641 5.6182209932755525 0.9165891991252698 1.2455251311187485 0.4378068179738218 0.14727079415402097 0.12238452606308617 5.762671057668217 0.02461242036079774 0.027866103739563778 2.1946164845302354e-09 8.658641362986641 0.3289359319934787 FLVHNVK ddPTM_A549_MK2206_60min_R1 2 FLVHNVK 7 0 D3YTB1;F8W727;P62910 D3YTB1 RPL32 60S ribosomal protein L32 0 ; 77.748 0.018365 4601500.0 1865.6000000000001 2140.2 1885.81 1498.8 2438.3999999999996 2169.82 2101.85 1974.7399999999998 2625.4 2199.7 2639.3999999999996 False True 2180.467670459151 2249.1270384666936 2153.2462147124506 1866.0060672836894 2079.714590128948 2399.4289121900547 2483.7289382129206 2254.6654423876157 2030.7510919022995 1702.7862422420003 1983.9641362658106 1.0990459104584405 1.133653072328197 1.0853251706279632 0.9405442533834607 1.0482621898817979 1.209411434576749 1.2519021351302047 1.1364446570245545 1.0235825611870941 0.8582747092631224 1.0 10.954170231304662 -8.83171395411268 5.83452359883317 1.0104864808732579 1.1126764966243072 0.3303676497859278 0.08935507574566905 0.22343915591752006 13.578620971352287 0.014843200485283203 0.015785746230207447 1.4732825531195255e-09 8.83171395411268 0.10219001575104936 FLVHNVK ddPTM_A549_PD325901_60min_R1 2 FLVHNVK 7 0 D3YTB1;F8W727;P62910 D3YTB1 RPL32 60S ribosomal protein L32 0 ; 88.734 0.0137 8747300.0 3297.0 3136.8 2934.8999999999996 3616.8 3973.5 3772.8999999999996 3223.4 3128.4 3423.8 3478.9 3577.8 False True 3631.709012876883 3401.1491446005575 3134.079962987409 3840.201521651226 3694.4150678308297 3742.1747533010084 3346.068250912163 3066.001607817678 3279.9095925852207 3259.241660287212 3137.75328154285 1.157423381321795 1.083944096117141 0.9988293156835981 1.2238698129137096 1.1774077616498473 1.1926287434112606 1.0663898498950446 0.9771327866511255 1.045305127040604 1.038718269998789 1.0 11.61551620373424 -7.9766233845739505 6.985566327866405 1.018762398622553 1.1355340651054533 0.4950108014675173 0.05865429616410722 0.11861315397062835 22.473195315566556 0.00953887749862166 0.013098510546234149 1.0553016457519424e-08 7.9766233845739505 0.11677166648290038 FLYGENMPPQDAEIGYRNS(ph)LR ddPTM_A549_PD325901_60min_R1 1 FLYGENMPPQDAEIGYRNSLR 21 1 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 FLYGENMPPQDAEIGY(0.002)RNS(0.997)LR 42.172 0.016037 3220500.0 1270.8 1768.0 1451.5 1774.2 2168.2 1837.9 2224.8 1676.0 1865.1 1996.4 2162.7 True False 1399.810680486486 1916.9955647965398 1550.0075185785624 1883.7883044994471 2015.913111883934 1822.9327517538038 2309.465981457274 1642.5708652034355 1786.7163330599615 1870.3469632922436 1896.7016104848544 0.7380236684296652 1.0106996030369255 0.8172121065381146 0.9931917040012919 1.0628520062091398 0.9611067664395597 1.2176221967075278 0.8660143778670302 0.9420123456336511 0.9861050114330457 1.0 10.88927701616109 -4.484619805532183 1.048351936534731 0.9842839621643634 2.3512031710842927e-16 0.32605064906461667 0.09950678060972319 7.0793960701481 1.8669626628014102 0.013858085873057915 11.552512663843682 3.276273842506296e-05 4.484619805532183 -0.9842839621643632 FMEQS(ph)RSPSVS(ph)PSKQPVSTSSK ddPTM_A549_MK2206_60min_R1 1 FMEQSRSPSVSPSKQPVSTSSK 22 2 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 FMEQS(0.506)RS(0.506)PS(0.124)VS(0.764)PS(0.1)KQPVSTSSK 71.528 0.00026675 8883900.0 2337.7 2437.3 2449.6 1855.5 3067.6 1973.0 2100.5 2141.0 3144.5 2823.0 3313.8 True False 2732.246608722319 2561.3481594499945 2796.9901143591437 2310.097583296561 2616.360103625147 2181.7815504285954 2482.1336606876043 2444.4933065375108 2432.2757707346614 2185.28233934135 2490.8920037726934 1.0968948491480446 1.028285512005574 1.1228869457699633 0.9274178004496775 1.0503707505834938 0.8759037112504594 0.996483852743586 0.9813726580016687 0.9764677742153204 0.8773091470973176 1.0 11.282446757465602 -6.25828643408556 24.99027246423524 0.9816999505453975 1.0772487429328428 0.4505030699145659 0.05656827867871149 172.53287417985666 1367489.1261775626 0.0058785949440248175 0.014850458190512108 5.517134428063901e-07 6.25828643408556 0.09554879238744529 FMEQS(ph)RSPSVSPSK ddPTM_A549_MK2206_60min_R1 1 FMEQSRSPSVSPSK 14 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 FMEQS(0.602)RS(0.37)PS(0.027)VS(0.001)PSK 48.477 0.0067372 10569000.0 3136.2 3383.8 3175.8 3024.7 3848.2 3388.0 2683.6 3343.8 4373.2 4564.4 4197.9 True False 3665.5138872716507 3556.0209666216238 3626.1761941467053 3765.7516357839418 3282.134877679713 3746.5159112276133 3171.1753829189483 3817.793889958025 3382.6771825653773 3533.298869886525 3155.445573854002 1.1616470008686162 1.1269473306992797 1.1491803960091005 1.1934135917243927 1.0401494181599764 1.1873175510524459 1.00498497239036 1.2099064302018823 1.0720125267233935 1.1197464152649035 1.0 11.62362802419677 -9.792879687135148 0.2939772699401355 0.9645452806652499 1.1557093060449386 0.03626844232710569 0.07046508399977497 1.4854474254283188 0.2734129998046308 0.10212910034430189 0.03707781079514518 1.611091895130613e-10 9.792879687135148 0.19116402537968868 FMEQSRS(ph)PS(ph)VSPSKQPVSTSSK ddPTM_A549_PD325901_60min_R1 2 FMEQSRSPSVSPSKQPVSTSSK 22 2 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 FMEQS(0.466)RS(0.547)PS(0.529)VS(0.379)PS(0.072)KQPVS(0.004)T(0.001)SSK;FMEQS(0.331)RS(0.661)PS(0.549)VS(0.359)PS(0.094)KQPVS(0.004)T(0.001)SSK 52.721000000000004 0.0020496 28801900.0 2717.6 2653.6 3012.4 3035.2 2753.0 2922.4 2914.83 3421.7999999999997 2957.0 3526.3 3290.3999999999996 True False 2993.488751408618 2877.2281848100097 3216.839579032769 3222.6774105606596 2559.638777334409 2898.6009433186314 3025.7554507061777 3353.5495146498306 2832.7275732444955 3303.648816197877 2885.70165956414 1.037352125950802 0.9970636345146608 1.114751266254823 1.1167742860318475 0.8870074177110256 1.0044700683841448 1.0485337043342144 1.1621262037033846 0.9816425630334753 1.1448338067965294 1.0 11.494706438089294 FMEQSRS(ph)PSVS(ph)PSKQPVSTSSK ddPTM_A549_MK2206_60min_R1 1 FMEQSRSPSVSPSKQPVSTSSK 22 2 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 FMEQS(0.467)RS(0.567)PS(0.21)VS(0.717)PS(0.037)KQPVS(0.001)T(0.001)SSK 50.144 0.0073812 12545000.0 1664.5 1767.5 1532.7 1196.2 1910.6 1254.6 1257.6 1506.4 2301.1 2115.8 3647.4 True False 1945.4269068821068 1857.4582003971043 1750.059907037175 1489.269053699459 1629.553270956516 1387.3609392639212 1486.0896413619287 1719.9368131565175 1779.9045241016156 1637.8393105130822 2741.649916881079 0.7095825382021197 0.6774964917877488 0.63832362267027 0.5432017576458712 0.5943695659036977 0.5060313976345284 0.5420420864865617 0.6273364088414067 0.6492092637875692 0.5973918480359083 1.0 11.42082864884118 -10.355563875984066 0.6543075299384762 1.0136820458462283 0.5994941241290144 0.0 0.12987522730893375 0.23499998764508254 0.177313596284575 0.05129949086048261 0.014001843733422892 4.4099749648856026e-11 10.355563875984066 -0.41418792171721397 FMEQSRS(ph)PSVS(ph)PSKQPVSTSSK ddPTM_A549_PD325901_60min_R1 1 FMEQSRSPSVSPSKQPVSTSSK 22 2 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 FMEQS(0.136)RS(0.864)PS(0.019)VS(0.487)PS(0.487)KQPVS(0.003)T(0.003)S(0.001)SK 76.16199999999999 0.00011653 25212000.0 2830.1 2231.0 2414.4 2427.1 3161.4 2378.7 2608.7 3017.1 2524.5 2731.6 2905.8 True False 3117.4096685904947 2419.0141996951816 2578.2557029666436 2577.0164546559627 2939.3541702379225 2359.32865585547 2707.9755060354137 2956.921573630837 2418.4040441852308 2559.126309822226 2548.4050213838705 1.2232787341227398 0.949226743550197 1.0117134762066051 1.0112271923151976 1.153409346463206 0.9258059986768801 1.0626158257076777 1.1603028360166738 0.9489873171227529 1.0042070582769977 1.0 11.315378869911694 FMEQSRS(ph)PSVSPSK ddPTM_A549_MK2206_60min_R1 3 FMEQSRSPSVSPSK 14 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 FMEQS(0.298)RS(0.634)PS(0.054)VS(0.013)PS(0.001)K;FMEQS(0.199)RS(0.755)PS(0.043)VS(0.002)PSK;FMEQS(0.014)RS(0.892)PS(0.092)VS(0.002)PSK 83.25299999999999 9.020299999999999e-05 27583500.0 8130.299999999999 8468.0 8697.2 8299.199999999999 9290.199999999999 7877.0 8640.6 6625.800000000001 11021.2 11728.6 11935.5 True False 9502.49587324938 8898.985030247622 9930.593738816282 10332.504372565247 7923.6238866535205 8710.538911670576 10210.485174261994 7565.027440661487 8524.915797239893 9079.101114133531 8971.585946957874 1.0591768199547293 0.9919076830853001 1.106893897860232 1.1516920680082032 0.8831909913698479 0.9709029109423162 1.1380914405355735 0.8432207510899086 0.9502127993468714 1.0119839644641775 1.0 13.131147323938846 -6.757683112944685 24.997876837438838 0.972351227762771 1.0734151987197118 0.29374197753729525 0.07920961672417774 98.58687016511688 656082.3995940984 0.010922798534844574 0.022069685007103327 1.7470964733355032e-07 6.757683112944685 0.10106397095694075 FMEQSRS(ph)PSVSPSK ddPTM_A549_PD325901_60min_R1 6 FMEQSRSPSVSPSK 14 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 FMEQS(0.262)RS(0.727)PS(0.008)VS(0.002)PSK;FMEQS(0.038)RS(0.949)PS(0.012)VS(0.001)PSK;FMEQS(0.489)RS(0.511)PS(0.001)VSPSK;FMEQS(0.204)RS(0.752)PS(0.042)VS(0.001)PSK;FMEQS(0.036)RS(0.825)PS(0.139)VS(0.001)PSK;FMEQS(0.013)RS(0.986)PS(0.001)VSPSK 109.42 3.6889e-06 89025100.0 21339.3 21124.6 21211.2 22316.7 26404.300000000003 24816.6 22669.3 23472.2 25162.0 26107.999999999996 25018.199999999997 True False 23505.65002683762 22904.844178790154 22650.719585307346 23695.151874096955 24549.753057889924 24614.50183751751 23531.99261661695 23004.02855741532 24104.52864321203 24459.536424380844 21941.120003436554 1.0713058414135659 1.0439231987793993 1.032341082941967 1.0799426770550307 1.1188924291031994 1.1218434534637354 1.0725064451099682 1.0484436780716886 1.098600647525588 1.1147806684686032 1.0 14.421349550785653 -10.868035374897318 0.9955881041362407 0.9977280444256675 1.0775400686582386 0.0 0.043358520727558636 0.41298520996830834 0.6916713258763701 0.024377459564938902 0.005254479440280847 1.3550790316395014e-11 10.868035374897318 0.07981202423257105 FNDEHIPESPYLVPVIAPSDDAR ddPTM_A549_MK2206_60min_R1 2 FNDEHIPESPYLVPVIAPSDDAR 23 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95 O75369-8 FLNB Filamin-B 0 ; 100.08 1.6836e-08 7295300.0 2704.2 2568.97 1867.19 2068.4 4823.4 3353.5 2443.7 3074.2 4554.0 2945.2 3143.5 False True 3160.6028486576106 2699.719600041952 2131.98561872561 2575.158092854006 4113.884249519345 3708.3651441268607 2887.688658234847 3509.977264342651 3522.526271243648 2279.8772744697635 2362.882193813588 1.337604920352181 1.142553618250736 0.9022818083387725 1.0898376988900214 1.7410450086297855 1.569424473990268 1.2221043714304878 1.4854643509237766 1.4907752407065396 0.9648713255526895 1.0 11.206331987339205 -4.882931651110514 17.171751040800196 1.2694303380666438 8.321657486058594 0.00605034371496771 0.26264719649913615 1107.7878844148834 162783.67993551918 0.038030153987256614 548.1848659407984 1.3093879771306515e-05 4.882931651110514 7.0522271479919505 FNDEHIPESPYLVPVIAPSDDAR ddPTM_A549_PD325901_60min_R1 2 FNDEHIPESPYLVPVIAPSDDAR 23 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95 O75369-8 FLNB Filamin-B 0 ; 110.9 1.1433000000000001e-10 6697600.0 2798.3 3061.8 3532.8999999999996 3532.3 3138.0 3561.2 3784.1 3784.8999999999996 3509.3 3532.2 3862.3 False True 3082.3813560004182 3319.8286313880335 3772.6638390535345 3750.482148564651 2917.597705512307 3532.198767912098 3928.1059962389727 3709.4072003033893 3361.816324919479 3309.176289190976 3387.2615851369387 0.9099921215195446 0.9800921918623597 1.1137798909915058 1.107231329585379 0.8613440775623934 1.0427888957295572 1.159670104451106 1.0951050301458862 0.9924879553651506 0.9769473676646069 1.0 11.725903689565419 -2.8752783082695754 22.505019842988215 1.0152175211713934 0.30485373557758555 0.0 0.08758676019996472 0.0 0.0 0.01126188158510015 0.0 0.0013326671474147601 2.8752783082695754 -0.7103637855938079 FNDPSGCAPS(ph)PGAYDVK ddPTM_A549_PD325901_60min_R1 1 FNDPSGCAPSPGAYDVK 17 0 O75330-2;O75330;O75330-3 O75330-2 HMMR Hyaluronan mediated motility receptor 1 FNDPS(0.123)GCAPS(0.877)PGAYDVK 73.707 0.00054947 3862400.0 1204.1 1567.2 1539.3 1781.8 1518.8 2035.1 1617.1 1677.1 1706.0 1519.4 1731.6 True False 1326.33934558843 1699.2734440888778 1643.7661545628532 1891.8577392385953 1412.1247275755552 2018.5268203352553 1678.6396254110737 1643.6489248405007 1634.3027527748088 1423.4648246975732 1518.624177516797 0.8733822134698364 1.1189558741699164 1.0824048364952836 1.245770854466506 0.9298710954836856 1.3291812748799259 1.105368695074991 1.082327641805453 1.0761732737899414 0.9373384447396161 1.0 10.568549166801267 -9.89406638344496 0.803479024111942 1.0076113439366485 1.1024067350040938 0.11990730360179735 0.12095102087535409 1.013420676943433 1.3460019774386338 0.046297667562280036 0.023023105438820347 1.276243715543312e-10 9.89406638344496 0.09479539106744528 FNDS(ph)EGDDT(ph)EETEDYR ddPTM_A549_MK2206_60min_R1 1 FNDSEGDDTEETEDYR 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 FNDS(1)EGDDT(0.999)EET(0.002)EDYR 103.5 1.5986e-06 2518700.0 666.14 778.39 679.48 1042.3 1076.8 848.94 770.73 946.51 1327.4 1081.2 1363.5 True False 778.5681464406408 818.0067262274974 775.8404812641866 1297.6635467906256 918.4041464283347 938.7742673192357 910.7616645092868 1080.680691065305 1026.7460194222263 836.956169073988 1024.9053193144032 0.7596488492824427 0.7981290669607337 0.7569874666892887 1.2661301705982757 0.8960868180903666 0.9159619426575094 0.8886300493771744 1.0544200236839554 1.0017959708795876 0.8166180361263602 1.0 10.001274924476009 FNDS(ph)EGDDT(ph)EETEDYR ddPTM_A549_PD325901_60min_R1 1 FNDSEGDDTEETEDYR 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 FNDS(1)EGDDT(1)EETEDYR 170.79 8.5627e-28 14312000.0 1290.6 1669.7 1683.3 1159.8 1623.4 1441.9 1879.0 1431.8 1482.3 1331.0 1601.3 True False 1421.620761910495 1810.4114788126597 1797.5388605051992 1231.4382119030886 1509.3779844259643 1430.157644460421 1950.506373228252 1403.24162577463 1420.0040858371037 1246.9604328501184 1404.3502514770419 1.0122978654472334 1.2891452662243896 1.279979021340735 0.8768739925156911 1.0747874206156607 1.0183767496436418 1.3889030682885442 0.999210577488596 1.0111466739466153 0.8879269480947599 1.0 10.455687080027433 FNDS(ph)EGDDTEET(ph)EDYR ddPTM_A549_PD325901_60min_R1 1 FNDSEGDDTEETEDYR 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 FNDS(1)EGDDT(0.176)EET(0.824)EDYR 208.87 6.6248e-46 17226000.0 1837.1 1481.0 1467.0 1605.5 1828.9 1566.7 1682.8 1574.7 2119.5 1716.8 1926.1 True False 2023.6010395984597 1605.8090675699516 1566.5594417876346 1704.6680886449471 1700.444373362479 1553.9413146377296 1746.8398748634922 1543.2913731717474 2030.4247857597932 1608.4009550090798 1689.2019105538816 1.1979627935271102 0.9506318087477263 0.9273962052730375 1.0091559084763255 1.0066554878598917 0.9199263302562802 1.034121417901257 0.913621612389551 1.2020024208319928 0.9521661945561573 1.0 10.722126068659767 -8.751410276240863 24.998644809766272 1.0953900367440124 0.9908767385095238 0.009752636822403904 0.09675092401457194 250.07793152785248 623346.1414738212 0.01661864911708932 0.018737237102526092 1.7725142027008568e-09 8.751410276240863 -0.10451329823448852 FNDS(ph)EGDDTEETEDYR ddPTM_A549_MK2206_60min_R1 3 FNDSEGDDTEETEDYR 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(0.997)EGDDT(0.003)EETEDYR;FNDS(1)EGDDTEETEDYR;FNDS(1)EGDDTEETEDYR 420.86 0.0 1155550000.0 53825.0 57334.0 49265.0 45168.0 67538.0 54575.0 54013.0 55942.0 77602.0 67018.0 69110.0 True False 62909.34410509428 60252.055706686064 56251.517792253144 56234.16202766855 57603.24966704762 60350.09027604691 63826.4629444035 63871.94981518986 60025.270904929566 51878.58725397762 51948.0796610329 1.2110042279827258 1.1598514536020879 1.0828411398323223 1.082507041542302 1.1088619645406594 1.1617386180555294 1.2286587562211808 1.229534378016696 1.155485848497216 0.9986622718778302 1.0 15.664782798270636 -10.494202255791954 0.9043669008128411 1.0036276324077051 1.154997207924224 0.5939787973983925 0.0500313999445147 0.35471074245640255 0.5383564901878156 0.03301025115024024 0.010432144731961815 3.204776476707053e-11 10.494202255791954 0.15136957551651875 FNDS(ph)EGDDTEETEDYR ddPTM_A549_PD325901_60min_R1 5 FNDSEGDDTEETEDYR 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(0.983)EGDDT(0.008)EET(0.008)EDY(0.001)R;FNDS(0.994)EGDDT(0.003)EET(0.003)EDYR;FNDS(1)EGDDTEETEDYR;FNDS(0.998)EGDDT(0.002)EETEDYR;FNDS(0.999)EGDDT(0.001)EETEDYR 411.68 0.0 1621024550.0 84964.66 83619.25 86388.66 83774.04000000001 94293.83 83686.06 82963.4 86057.85 93865.88 92653.01000000001 95868.8 True False 93590.20973552308 90666.1376592833 92251.51396481371 88948.57218615088 87670.95667685392 83004.54847338474 86120.61758631437 84341.35867067262 89921.02349099044 86802.88313633838 84077.54536239457 1.1131415567869711 1.0783632808080956 1.0972194010563388 1.0579349314107709 1.0427392509970514 0.9872380088597383 1.0242998557476157 1.0031377379910529 1.0695010552866293 1.0324145735011285 1.0 16.359432930091288 -6.521974651284516 2.057885475507965 1.0274016688821364 1.0955458163965899 0.6733730018989469 0.02243160992348621 0.2072066424490725 1.7362276791050502 0.004286995930351667 0.011371856507596666 3.006251765131085e-07 6.521974651284516 0.06814414751445352 FNDS(ph)EGDDTEETEDYRQFR ddPTM_A549_MK2206_60min_R1 2 FNDSEGDDTEETEDYRQFR 19 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(1)EGDDTEETEDYRQFR;FNDS(0.991)EGDDT(0.009)EETEDYRQFR 150.72 1.1435999999999998e-21 22708000.0 2961.5 4492.6 3919.4 3764.2 4417.1 3209.8 3430.8999999999996 2645.7 6484.700000000001 6162.3 6661.0 True False 3461.328798276574 4721.254150553906 4475.229855576107 4686.429168981359 3767.350441296989 3549.4589055072006 4054.250119711067 3020.736077116435 5015.925803938005 4770.232150096779 5006.889865752285 0.6913131486978513 0.9429514683052724 0.89381431898217 0.9359960563616718 0.7524332554358962 0.7089149153820851 0.8097342319116332 0.6033158623637049 1.001804700807886 0.9527335887145686 1.0 12.28969900613518 -8.859917067410398 24.999832906830342 1.0008556604998535 0.8019692960887064 0.41587690270449584 0.10066747430119265 8.509306827534626 2150.8564884288257 0.01734849425410968 0.018468856961858363 1.3806478870470503e-09 8.859917067410398 -0.19888636441114715 FNDS(ph)EGDDTEETEDYRQFR ddPTM_A549_PD325901_60min_R1 2 FNDSEGDDTEETEDYRQFR 19 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(0.997)EGDDT(0.003)EETEDYRQFR;FNDS(1)EGDDTEETEDYRQFR 236.59 1.701e-85 47895000.0 5951.7 5860.9 7291.6 8745.7 6916.7 12810.1 9241.6 9295.3 9202.3 9108.5 10372.5 True False 6555.912202590037 6354.818611830337 7786.451823952772 9285.902026074187 6430.894853319619 12705.778792775114 9593.294145197564 9109.89794947822 8815.559332860266 8533.387755533668 9096.748256694947 0.7206874388070564 0.6985813427510619 0.8559599105342028 1.0207935587576613 0.7069443576815114 1.3967385305429358 1.0545849873483277 1.0014455377253728 0.9690890727213722 0.9380701229423754 1.0 13.151135213235287 -6.019608260834759 1.2608358519970317 1.008363613658052 0.6785838039960345 0.3776828416479946 0.15122018431001633 0.4459096278915055 1.1754768841627687 0.021217285254016432 0.1322538440575568 9.55854390142584e-07 6.019608260834759 -0.3297798096620176 FNEEHIPDSPFVVPVAS(ph)PSGDAR ddPTM_A549_MK2206_60min_R1 2 FNEEHIPDSPFVVPVASPSGDAR 23 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5C6 Q60FE5 FLNA Filamin-A 1 FNEEHIPDSPFVVPVAS(0.793)PS(0.207)GDAR;FNEEHIPDSPFVVPVAS(0.831)PS(0.169)GDAR 99.98700000000001 7.8474e-09 56230000.0 2527.3 3363.8 3068.6000000000004 2580.5299999999997 4197.6 3506.1000000000004 2741.4 3173.6 4893.8 3415.5 3548.3999999999996 True False 2953.8464534473696 3535.003052048532 3503.7736221923874 3212.7599658443946 3580.138600527099 3877.113174839177 3239.476894743632 3623.4675187423813 3785.3621137927466 2643.936177832229 2667.2343491420793 1.1074566636401784 1.325344004056326 1.313635460385917 1.2045285660323715 1.342266232316128 1.45360799514533 1.2145452820017917 1.3585111184204253 1.4192086702131423 0.9912650452640789 1.0 11.381128873514863 -10.89146642320304 1.1199536239432097 0.9985028151809852 1.3151944359512782 0.6065285206967654 0.09515956668977263 0.2754781628579337 0.6088620706749978 0.06822691925930871 0.016031049142388308 1.283907029894426e-11 10.89146642320304 0.316691620770293 FNEEHIPDSPFVVPVAS(ph)PSGDAR ddPTM_A549_PD325901_60min_R1 2 FNEEHIPDSPFVVPVASPSGDAR 23 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5C6 Q60FE5 FLNA Filamin-A 1 FNEEHIPDSPFVVPVAS(0.746)PS(0.254)GDAR;FNEEHIPDSPFVVPVAS(0.839)PS(0.161)GDAR 130.53 1.6978999999999998e-22 128081000.0 10703.3 16628.7 15432.7 14777.8 11611.099999999999 13031.3 14296.4 18176.5 10873.2 16252.2 14595.0 True False 11789.891136646987 18030.058907427727 16480.055826364027 15690.591143181113 10795.57639212043 12925.177413313751 14840.457325290263 17813.955448311597 10416.237216571544 15226.033318382193 12799.907525327817 0.9210918995561288 1.4086085287530983 1.287513663184997 1.2258362892179773 0.8434104989242058 1.0097867807043182 1.1594191048587428 1.3917253240355238 0.8137744117260547 1.189542446947658 1.0 13.643845766865905 -8.783635113470883 24.998983078331097 0.9120601335834367 1.155891774634681 0.0649778543332602 0.19311432719714666 228.0220221065674 256819.35439092503 0.03171505381200698 0.03377580938050576 1.6457538757514824e-09 8.783635113470883 0.24383164105124433 FNEEHIPDSPFVVPVASPSGDAR ddPTM_A549_PD325901_60min_R1 2 FNEEHIPDSPFVVPVASPSGDAR 23 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5C6 Q60FE5 FLNA Filamin-A 0 ; 63.573 0.00082111 11234000.0 2769.8 2626.3 2807.0 3115.6 3622.6000000000004 3190.6000000000004 3358.8 2994.9 3418.7 2890.1 3816.0 False True 3050.988056981009 2847.6275180006505 2997.499899862232 3308.0435359590138 3368.161073291551 3164.616811440058 3486.620972005882 2935.1643700464024 3275.0239278494946 2707.618592772449 3346.656191617056 0.9116526712912256 0.8508873798072213 0.8956701041985085 0.9884623177741526 1.006425781569186 0.9456055926411016 1.0418222764380218 0.8770438915711187 0.9785958701264292 0.8090519126388561 1.0 11.708504632481786 -6.212481843275542 4.736487667315702 0.9833450259800324 0.8802738379101381 0.08605578971886241 0.06695783590125062 0.11633207320824634 5.877807212129149 0.005436155486646143 0.014684710127619434 6.130814229562051e-07 6.212481843275542 -0.10307118806989424 FNFS(ph)KPK ddPTM_A549_MK2206_60min_R1 2 FNFSKPK 7 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FNFS(1)KPK;FNFS(1)KPK 61.65 0.007771899999999999 11302200.0 3711.3 8814.4 5920.299999999999 3938.4 7202.700000000001 5489.1 3513.7 5116.3 5797.299999999999 5920.5 6494.5 True False 4337.6767074265945 9263.015310653605 6759.887562883915 4903.308176801493 6143.192371358993 6069.95291863031 4152.093807930506 5841.551193011616 4484.2208063857715 4583.054938034173 4881.73641091851 0.8885520114779099 1.8974837088573464 1.3847301439227084 1.004418871497186 1.2584031283661907 1.2434003820964667 0.8505362556331222 1.1966133976317077 0.9185708585896498 0.9388165505584641 1.0 12.253178683646972 -7.009751323926598 0.7366727621123128 0.9687505022651455 1.4153697940781496 0.24162864650372196 0.25401999551946614 0.6362335222362063 0.6410741968967433 0.04304447493776706 0.1442492055190955 9.777969450908783e-08 7.009751323926598 0.4466192918130041 FNFS(ph)KPK ddPTM_A549_PD325901_60min_R1 2 FNFSKPK 7 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FNFS(1)KPK;FNFS(1)KPK 64.297 0.0072169 36795000.0 6958.799999999999 8070.5 9118.0 7443.7 12012.5 10020.2 9665.0 10874.8 7726.0 9280.599999999999 11585.4 True False 7665.252253202197 8750.629358422211 9736.802310988174 7903.480443130731 11168.783440875264 9938.59881338672 10032.806863890937 10657.893582884433 7401.303087888726 8694.621332162893 10160.469245901539 0.7544191186144433 0.8612426401420369 0.9583024243605421 0.7778656922089286 1.0992389397153535 0.9781633675428607 0.9874353852247427 1.04895682718429 0.7284410698722614 0.8557302937233997 1.0 13.310679411886127 -5.346172247440248 3.0779507154413306 0.9093224350323369 0.7434353207348025 0.16553868480429323 0.10878606522585679 0.5374727259900594 7.957876897448025 0.017808022636796695 0.1911305971961014 4.506379396027052e-06 5.346172247440248 -0.16588711429753444 FNGGHS(ph)PTHS(ph)PEK ddPTM_A549_MK2206_60min_R1 5 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 FNGGHS(0.936)PT(0.073)HS(0.991)PEK;FNGGHS(0.918)PT(0.084)HS(0.999)PEK;FNGGHS(0.884)PT(0.13)HS(0.986)PEK;FNGGHS(0.896)PT(0.113)HS(0.991)PEK;FNGGHS(0.914)PT(0.131)HS(0.955)PEK 108.96 2.372e-05 200019000.0 10869.8 12655.6 11548.3 10406.51 15996.199999999999 12591.7 11307.5 12404.1 18272.8 18365.2 20215.5 True False 12704.35649890486 13299.715983561871 13186.022590485678 12956.10541716598 13643.180170038006 13924.145336306 13361.926383349244 14162.419160963076 14134.03997566556 14216.488564814652 15195.433430583287 0.8360641081375981 0.8752442662671289 0.8677621899186276 0.8526315143528388 0.8978473850294314 0.9163374904648254 0.8793382857020839 0.9320181109450224 0.9301504981897062 0.9355763775847059 1.0 13.891350206053943 -10.238069420726042 0.09557001203893184 1.1719759924719788 0.74621333227817 0.6962825737654834 0.02455307459589195 4.720907223717453 0.1390845209539444 0.41172369855005675 0.2093466293095098 5.7800364779739795e-11 10.238069420726042 -0.4257626601938088 FNGGHS(ph)PTHS(ph)PEK ddPTM_A549_PD325901_60min_R1 4 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 FNGGHS(0.907)PT(0.094)HS(0.999)PEK;FNGGHS(0.988)PT(0.035)HS(0.978)PEK;FNGGHS(0.972)PT(0.055)HS(0.972)PEK;FNGGHS(0.907)PT(0.148)HS(0.944)PEK 102.69 4.5483999999999993e-05 250968000.0 16520.1 16447.2 17511.6 17183.2 20503.9 19092.5 17653.199999999997 19022.6 19007.0 19564.0 20090.699999999997 True False 18197.20839054516 17833.26326545342 18700.04248180528 18244.567238121355 19063.77679861497 18937.017010098203 18325.002186201706 18643.17932005899 18208.20188862297 18328.72570118687 17619.67126544045 1.0327779739135938 1.0121223601050897 1.061316195977157 1.035465813366597 1.0819598454147674 1.0747656255790434 1.0400308785638188 1.0580889415698729 1.0334019071250709 1.040242205717945 1.0 14.104899387341089 -9.75126121552918 0.7956111208776471 1.0037917660183346 1.049746209865106 0.13502536853995262 0.022011594818339145 0.3709249778192478 0.49286034202776824 0.007810372892232074 0.004299438219524732 1.7731226782556704e-10 9.75126121552918 0.04595444384677139 FNGGHS(ph)PTHSPEK ddPTM_A549_MK2206_60min_R1 3 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 FNGGHS(0.999)PT(0.001)HSPEK;FNGGHS(0.988)PT(0.012)HSPEK;FNGGHS(0.96)PT(0.04)HSPEK 133.86 8.713799999999999e-09 150097000.0 8150.199999999999 10163.3 9902.6 9191.7 11532.1 9201.4 7800.0 10114.5 14995.1 15851.900000000001 17946.1 True False 9525.754506741087 10680.568559035859 11306.937584280238 11443.666912631095 9835.743366480492 10175.086040605009 9217.159035164626 11548.261349357152 11598.733792254201 12270.94478037731 13489.588082836968 0.7061560700182437 0.7917638769581798 0.8381973945272834 0.848333310280324 0.7291359310663218 0.7542918270092283 0.6832795025736756 0.8560870264118888 0.8598286115950025 0.9096604510844805 1.0 13.719558674468574 -9.5733270977726 0.646759798266652 0.9879238417404439 0.7713481103873625 0.5819386111266186 0.05826219395434956 0.2758971215785794 0.2513531272047226 0.025176933845656523 0.014037263098359625 2.6709939371720756e-10 9.5733270977726 -0.2165757313530814 FNGGHS(ph)PTHSPEK ddPTM_A549_PD325901_60min_R1 3 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 FNGGHS(0.994)PT(0.006)HSPEK;FNGGHS(0.917)PT(0.083)HSPEK;FNGGHS(0.957)PT(0.043)HSPEK 131.18 4.7747000000000004e-08 289828000.0 7513.5 9440.5 8983.9 11045.5 11795.899999999998 11923.300000000001 11527.400000000001 12163.900000000001 13227.0 11498.2 14250.0 True False 8276.264988853636 10236.084066437634 9593.601478579367 11727.755448849432 10967.396677645826 11826.20059795751 11966.081515035325 11921.281472105049 12671.11518813153 10772.201689704907 12497.340338192624 0.6622421063112823 0.8190609993356383 0.7676514537465818 0.9384201063172382 0.8775784591645314 0.9462973943196481 0.9574902492225694 0.9539054830468925 1.0139049465915433 0.8619595368451647 1.0 13.609333475303103 -3.9933762908653203 0.32268643492904625 1.012738825996139 6.697520454932522e-08 0.6926658629411035 0.05653914864820138 2.7369740088616936 0.10560716708013576 0.009897136067179953 1.2875032579401942 0.00010153685539375172 3.9933762908653203 -1.0127387590209345 FNGGHSPT(ph)HSPEK ddPTM_A549_MK2206_60min_R1 1 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 FNGGHS(0.097)PT(0.899)HS(0.003)PEK 119.45 5.8414e-06 33853000.0 1606.5 1746.9 1324.7 1490.1 1808.1 1361.9 1324.8 1751.4 2250.2 2537.0 2576.2 True False 1877.6379248459637 1835.8097483868194 1512.562379364614 1855.1745668931305 1542.1308851755864 1506.0153540439455 1565.4990115110386 1999.6663134375497 1740.533292831019 1963.8899379769764 1936.4584404970774 0.9696246950510258 0.9480243469183763 0.7810972586513905 0.9580244678098634 0.7963666314365778 0.777716331292584 0.8084340870797022 1.0326409653925994 0.898822952474123 1.0141658074897066 1.0 10.919204823811896 -10.007430614114192 0.524533895733783 1.002097447736757 0.8731774293372688 0.25833067645141494 0.081580830175556 1.1274751816140778 0.5972807264634977 0.06582529122904236 0.02175797929444566 9.830359170617527e-11 10.007430614114192 -0.1289200183994882 FNGGHSPT(ph)HSPEK ddPTM_A549_PD325901_60min_R1 1 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 FNGGHS(0.151)PT(0.848)HS(0.001)PEK 87.99 9.2781e-05 71379000.0 2850.9 3635.6 3512.2 4141.4 4464.1 5149.0 4027.7 4151.0 5313.1 4589.6 5030.8 True False 3140.3212692783463 3941.984771139309 3750.559012574325 4397.20487219818 4150.557016308952 5107.068251145512 4180.976327542009 4068.205048603495 5089.808883802948 4299.811872733967 4412.043492868733 0.7117611769589546 0.8934600888479027 0.8500729919449849 0.9966367918415726 0.9407334771331185 1.1575289906820185 0.9476280853304819 0.9220682106101198 1.1536171146158691 0.9745624402125301 1.0 12.107231297403885 -4.696666880474478 0.46245685341571563 1.062165435926902 0.2869666544343896 0.5288832722258785 0.08271416459574664 3.6685266477346112 0.35829700225489225 0.017700739664883506 1.7414429306859216 2.0106344504014332e-05 4.696666880474478 -0.7751987814925123 FNGS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 FNGSPSK 7 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 FNGS(0.993)PS(0.007)K;FNGS(0.998)PS(0.002)K 125.66 0.0059769 194144000.0 19946.3 23115.0 22623.0 19330.9 30190.0 21392.0 20516.2 21693.1 31663.0 31844.0 30972.0 True False 23312.74779978526 24291.454767852374 25831.28157950154 24066.971367797083 25749.09099245116 23655.687241139654 24243.727974005713 24768.16335733249 24491.381055421094 24650.4182833815 23280.79761628579 1.0013723835422683 1.043411620521953 1.1095531177776998 1.0337691931551922 1.106022715237158 1.0161029545049443 1.0413615707498922 1.0638880920474234 1.0519992252451202 1.0588304872397332 1.0 14.506852866375871 -10.62595182642371 0.6092765269527591 0.9936604554849765 1.0543780007318002 0.0 0.03582012695597095 1.0517106681798967 0.5899657471738419 0.0345065718199172 0.0064497805024607184 2.366182148747016e-11 10.62595182642371 0.06071754524682371 FNGS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 FNGSPSK 7 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 FNGS(0.993)PS(0.007)K;FNGS(0.663)PS(0.337)K 100.79 0.011129 288870000.0 27761.0 27267.0 26216.0 28108.0 32064.0 29508.0 27791.0 29864.0 27253.0 28397.0 33246.0 True False 30579.276283431947 29564.88578354484 27995.175409614632 29844.167322100366 29811.935254794953 29267.696631346204 28848.601712818738 29268.339092145237 26107.65118486039 26604.00857373765 29156.95276375805 1.0487816244447135 1.0139909346183065 0.9601543630585601 1.023569491774755 1.0224640241503922 1.0037981975855106 0.9894244417982324 1.0038202321514764 0.8954176863541129 0.9124413236628178 1.0 14.831552328901026 -8.571080537292573 24.637087210043923 0.950561483320573 1.0072775563271466 0.4781329796093755 0.0326876400213496 94.00666595659727 48048.567285699704 0.007014075379654091 0.00795321584257023 2.6848465108964676e-09 8.571080537292573 0.05671607300657355 FNGTHIPGS(ph)PFK ddPTM_A549_MK2206_60min_R1 2 FNGTHIPGSPFK 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 FNGTHIPGS(1)PFK;FNGT(0.001)HIPGS(0.999)PFK 72.175 0.00063912 15812800.0 2078.8 2457.2 2210.63 2333.3 3219.5 2436.9 2357.8 2208.5299999999997 3819.7 3333.5 3287.6000000000004 True False 2429.6506182196017 2582.2609844502194 2524.1305749941857 2904.9586047458165 2745.9158148458623 2694.7711405166992 2786.181740142458 2521.5958908394628 2954.5440488075005 2580.4600347837018 2471.1981868559074 0.9831872777920874 1.044942893769122 1.0214197260340434 1.1755263581031437 1.1111677847010226 1.0904714785119045 1.127461874552159 1.020394035675332 1.195591703054198 1.044214117875672 1.0 11.270995002220143 -6.060312059579129 24.348665297967663 1.0972785920135582 1.0188439887940002 0.2685546888311152 0.058060477472603525 229.17425058084015 92520.0547271994 0.010278063877670643 0.027193289938774907 8.703379893127083e-07 6.060312059579129 -0.07843460321955797 FNGTHIPGS(ph)PFK ddPTM_A549_PD325901_60min_R1 2 FNGTHIPGSPFK 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 FNGTHIPGS(1)PFK;FNGT(0.001)HIPGS(0.999)PFK 69.729 0.0010642000000000002 27008000.0 3855.6 3763.1 3525.0 3778.5 3986.6 4674.0 3717.7 3794.0 4266.4 4429.0 4507.5 True False 4247.017673657295 4080.2296436005977 3764.227697546978 4011.889363403882 3706.5949690233783 4635.93649365976 3859.179107903501 3718.32569366458 4087.0980448056503 4149.352184142132 3953.1060753967204 1.0743495349365444 1.032157894521239 0.9522202606640685 1.014870151947861 0.9376411607298945 1.1727326323249532 0.9762397047532317 0.9406086309716395 1.033895364013343 1.0496435220817384 1.0 11.948770952795979 -5.3799312486754465 4.134034289094885 1.0101524769998822 1.0735206133804736 0.08473020124422581 0.06280550713484356 0.40974665663807136 10.715395836690709 0.007801166085763605 0.05601072090563663 4.169353815249751e-06 5.3799312486754465 0.06336813638059136 FNGTHIPGSPFK ddPTM_A549_MK2206_60min_R1 2 FNGTHIPGSPFK 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 56.122 0.018300999999999998 2430200.0 2087.11 2239.5 2269.8999999999996 2057.3 2796.8 2103.5 2447.2 2463.7 3779.7 2889.5 3066.8 False True 2439.363143059607 2353.4809843221024 2591.805952230495 2561.3385923557066 2385.3944248985563 2326.090973809707 2891.8245629301123 2812.9370197648122 2923.6039849406257 2236.759943155096 2305.228920625896 1.0581869424045278 1.0209315713786487 1.1243160837695851 1.1110994528301656 1.0347755069162043 1.0090498835049089 1.2544630761204179 1.2202419441280772 1.2682488748869392 0.970298404267716 1.0 11.170694309179103 -7.735170324813349 24.998951123382852 1.1471099735657537 1.0621000569963 0.16246134572408033 0.09341705838329958 380.8161012759535 362402.8149389596 0.016996053491205088 0.025204831468894805 1.840050215474476e-08 7.735170324813349 -0.08500991656945378 FNGTHIPGSPFK ddPTM_A549_PD325901_60min_R1 2 FNGTHIPGSPFK 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 63.091 0.0077547 7160500.0 3243.6000000000004 3123.7 3409.2 3513.2 3713.7 4223.7 3889.6000000000004 3649.7 4382.6 4061.5 4271.3 False True 3572.8878841878836 3386.9451616261044 3640.568813185008 3730.2023849438947 3452.8625235694876 4189.303587563273 4037.620856470789 3576.9038703657393 4198.4145629020395 3805.056196860074 3745.957178001554 0.9537983790017585 0.904160138699989 0.9718661052946767 0.9957941876244126 0.9217570728909318 1.118353304240985 1.0778609216843307 0.9548704644493551 1.120785519801876 1.0157767470502823 1.0 11.871118692134687 -7.249757287355955 24.99954343665195 1.0554192673887106 0.9507748909205443 0.4737925842272237 0.05133282343062493 557.512472253297 1193070.0725637078 0.00853202417873885 0.014703562412054198 5.626556867624908e-08 7.249757287355955 -0.10464437646816627 FNISSHNQS(ph)PK ddPTM_A549_PD325901_60min_R1 2 FNISSHNQSPK 11 0 Q9H1A4 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 FNISSHNQS(0.999)PK;FNISS(0.001)HNQS(0.999)PK 57.836000000000006 0.0038441 5671600.0 2780.4 2802.3 2744.0 2527.5 3215.0 2981.2 3220.0 3443.0 3784.6 4142.8 4596.7 True False 3062.6641611777018 3038.459655672704 2930.224341012456 2683.6179346310187 2989.189491147884 2956.92209561371 3342.5388620516096 3374.326664018753 3625.546423301021 3881.222900985331 4031.335040882108 0.7597146181398884 0.753710526378837 0.7268620224557881 0.6656896307094854 0.7414887278864847 0.7334845815659861 0.8291394359820361 0.8370246158653206 0.8993413810894033 0.9627636655414454 1.0 11.9770419740115 -8.653514751855443 0.6161750947118333 0.9817057487493698 0.7195901446285743 0.9114284101460662 0.03009702431200678 0.12974993158112622 0.10676086470212065 0.009836896415235217 0.010503738754572096 2.2206762515657287e-09 8.653514751855443 -0.2621156041207955 FNISSHNQS(ph)PKR ddPTM_A549_MK2206_60min_R1 2 FNISSHNQSPKR 12 1 Q9H1A4 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 FNIS(0.005)S(0.03)HNQS(0.965)PKR;FNIS(0.006)S(0.036)HNQS(0.959)PKR 69.92 0.00073898 5901400.0 2721.3999999999996 2611.0 2824.1 2590.6 3759.5 2479.1000000000004 2496.8 2468.9 3603.3 3140.8999999999996 3601.8 True False 3180.705788157986 2743.8887475173083 3224.599845673439 3225.2971162964527 3206.4825301795368 2741.436716506605 2950.4362408973134 2818.8741356891464 2787.158303287712 2431.3685085502125 2707.3736553770564 1.1748307374716656 1.0134872746758579 1.1910435189723927 1.1913010640000725 1.1843516774314513 1.0125815884563614 1.0897779975946489 1.0411840013625904 1.0294693891817248 0.89805428361221 1.0 11.402678298021437 -7.268923819623173 24.82587093662613 1.0227508679467063 1.1478263714075077 0.5367846405168133 0.06390042682325335 291.0906858700072 965546.5955604163 0.007872910547417757 0.0127360919434234 5.383642096693341e-08 7.268923819623173 0.12507550346080132 FNISSHNQS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 FNISSHNQSPKR 12 1 Q9H1A4 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 FNIS(0.003)S(0.025)HNQS(0.971)PKR;FNIS(0.001)S(0.003)HNQS(0.996)PKR 74.678 0.00028765 6276100.0 2907.6 3166.7 2498.6000000000004 2909.4 3704.5 3299.9 2897.3 2846.9 3219.5 2797.8 3089.7 True False 3202.7774115380107 3433.5689225346173 2668.1700213023764 3089.107030273191 3444.3086998312124 3273.02670847836 3007.558336963395 2790.116346150155 3084.1956111128356 2621.1464305244644 2709.6864872220176 1.1819734226233354 1.267146195224499 0.9846784983741038 1.1400237794447419 1.2711096712012364 1.207898671640748 1.109928529055314 1.0296823486065336 1.1382112379630924 0.9673246122327883 1.0 11.403910224988481 -14.999999977450594 0.15687058914504323 0.4226559501581568 1.1950382307934682 0.40507116097823237 0.08090366388125224 50.87134997239199 0.5180805488283808 9.021241404111278 0.13902244601345284 1.0000000519219271e-15 14.999999977450594 0.7723822806353113 FNIT(ph)PNKLVELNK ddPTM_A549_PD325901_60min_R1 1 FNITPNKLVELNK 13 1 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3;Q5TF96 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 FNIT(1)PNKLVELNK 68.919 0.0014212 5920400.0 2581.7 2239.8 2907.8 2299.6 3510.3 3131.3 2793.7 2559.8 2805.7 3131.7 3246.8 True False 2843.7922834529118 2428.5558065787827 3105.1407940218705 2441.6410692294717 3263.7486378775816 3105.7997309792063 2900.0157822712986 2508.7427808757466 2687.786186084573 2933.9639275407353 2847.464183160969 0.9987104667620504 0.8528837064713642 1.0904933633176923 0.8574791155121773 1.146194799280845 1.0907247751687115 1.0184555786236413 0.8810445433209251 0.9439227372829893 1.0303778164766038 1.0 11.475461979764559 -5.74270353998828 24.999912663852456 0.987294760868649 0.9257971994684444 0.07518400710172102 0.09057423336319723 542.54536789957 723926.6417165811 0.011771948445741335 0.04543439339272576 1.8084081683167718e-06 5.74270353998828 -0.06149756140020457 FNNDSHS(ph)PK ddPTM_A549_MK2206_60min_R1 6 FNNDSHSPK 9 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 FNNDS(0.05)HS(0.95)PK;FNNDS(0.003)HS(0.997)PK;FNNDS(0.001)HS(0.999)PK;FNNDS(0.01)HS(0.99)PK;FNNDS(0.073)HS(0.927)PK;FNNDS(0.023)HS(0.977)PK 148.28 2.6641999999999997e-05 287008200.0 25168.1 25712.699999999997 23858.100000000002 21996.7 34394.899999999994 26598.6 24719.6 24507.300000000003 37695.8 37986.299999999996 36620.3 True False 29415.859979032473 27021.366602178583 27241.53733156104 27385.89248746939 29335.45577264853 29413.246197278288 29210.83134431481 27981.28482545855 29157.761487823067 29405.168447368877 27526.468841136222 1.0686390669577166 0.9816503074959327 0.9896488172449721 0.9948930480521079 1.0657180890855464 1.0685441117431822 1.061190649367326 1.016522859758991 1.0592626920692785 1.068250657833201 1.0 14.7485319291078 -6.734404098717939 24.99792087315006 1.0355560316113013 1.0054137693737 0.20620045937414977 0.03138311281990545 336.83943154382524 311453.37554974464 0.004833612943853097 0.010059988693331285 1.8432994830141462e-07 6.734404098717939 -0.030142262237601303 FNNDSHS(ph)PK ddPTM_A549_PD325901_60min_R1 4 FNNDSHSPK 9 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 FNNDS(0.001)HS(0.999)PK;FNNDS(0.001)HS(0.999)PK;FNNDS(0.05)HS(0.95)PK;FNNDS(0.016)HS(0.984)PK 137.92 4.3303e-05 592262000.0 32929.8 31795.0 32054.9 32570.1 41622.2 32159.9 32636.600000000002 34695.5 32273.0 30839.5 35236.1 True False 36272.80905436251 34474.47623456221 34230.338275772636 34581.881104936016 38698.80026079487 31898.000436980867 33878.6036724328 34003.471034406786 30916.678042380652 28892.28870689801 30902.283080041343 1.1737905888833757 1.1155964154903497 1.1076960943989527 1.1190720444623456 1.2522958307177314 1.0322214819649562 1.0963139385100564 1.1003546549079537 1.0004658219686235 0.9349564442233229 1.0 14.91542580883046 -8.359602713794805 0.9347539211436171 0.9971086219259608 1.1402999312488105 0.5990807931027721 0.05349502533016133 0.24739666853146572 0.425142481054298 0.010119523456272934 0.012845438968920998 4.369153332049253e-09 8.359602713794805 0.14319130932284962 FNPFVTSDR ddPTM_A549_MK2206_60min_R1 1 FNPFVTSDR 9 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 0 62.2 0.020186000000000003 4486500.0 606.87 605.87 933.76 554.97 1010.3 647.13 780.14 659.39 1074.4 773.52 981.75 False True 709.2948194530156 636.7061951199967 1066.1812088438908 690.9376749135499 861.6862083363168 715.6088670698715 921.8813397042735 752.8605517971835 831.0501154642456 598.7812947670282 737.9543800784122 0.961163506310036 0.8627988562820681 1.4447792947995002 0.9362877890095774 1.167668668413835 0.9697196552906613 1.2492389293851984 1.020199313292493 1.1261537811808113 0.8114069255926145 1.0 9.527387822227142 -2.003266460920004 24.526019837585007 1.0699563217803554 0.00045856237038099934 0.0 0.1763835095651273 0.0 0.0 0.018550401686130348 0.0 0.009925069100071007 2.003266460920004 -1.0694977594099744 FNPFVTSDR ddPTM_A549_PD325901_60min_R1 2 FNPFVTSDR 9 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 0 ; 137.95 0.00011987 14173500.0 5695.1 4983.299999999999 5476.5 5487.5 7211.200000000001 6521.0 5685.1 6374.8 6553.3 6439.799999999999 6504.4 False True 6273.262359488966 5403.26017989287 5848.168222869794 5826.450411983274 6704.710189289464 6467.895138030663 5901.44959150609 6247.649613066143 6277.887590714623 6033.189928976858 5704.400034788781 1.099723427745412 0.9472091976265017 1.0252030340095768 1.0213958306658295 1.1753576446953586 1.1338431909728701 1.0345434323531983 1.095233429451705 1.1005342459204084 1.0576379447764748 1.0 12.477859442455324 -6.565444129590542 24.999971319161112 1.0664244925104702 1.017517140452843 0.16682531247902288 0.05694583932525171 240.9248535944866 141502.08157358793 0.009207694346996925 0.019167349864723716 2.71991837122319e-07 6.565444129590542 -0.04890735205762731 FNS(ph)ITSAYYR ddPTM_A549_MK2206_60min_R1 2 FNSITSAYYR 10 0 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 FNS(0.974)IT(0.009)S(0.018)AYYR;FNS(0.843)IT(0.138)S(0.018)AYYR 115.57 8.7295e-05 20386000.0 4707.4 4915.3 3761.6 3683.7 5958.200000000001 4908.700000000001 4026.1 4027.5 6333.9 5957.700000000001 6515.7 True False 5501.894035119751 5165.4677750562305 4295.05144275529 4586.206665367575 5081.756672779812 5428.135375868653 4757.590255317479 4598.410458701456 4899.28176315989 4611.851432197651 4897.671865828275 1.1233692631609757 1.0546782055973174 0.8769577792098425 0.9364054577372086 1.0375861862522726 1.1083093201366743 0.9713983267257726 0.9388972117109751 1.0003287066540425 0.941641571452585 1.0 12.257880404133541 -5.526128686589373 24.99863159992702 0.9925614832801831 1.106196540705006 0.345576428871853 0.05898662063994246 69.03652643499625 531038.5012421597 0.007860422284409224 0.03076639359099423 2.9776339905430556e-06 5.526128686589373 0.11363505742482294 FNS(ph)ITSAYYR ddPTM_A549_PD325901_60min_R1 1 FNSITSAYYR 10 0 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 FNS(0.989)IT(0.01)S(0.001)AYYR 83.617 0.00096336 14843000.0 2327.8 2426.1 1953.0 2040.9 2628.9 2620.3 2319.9 2327.5 2596.9 2341.5 2782.4 True False 2564.1165423642133 2630.5559613986916 2085.542324343047 2166.9617577798012 2444.255133212651 2598.9611455576965 2408.1850639979916 2281.0761866115727 2487.7613239630114 2193.6572903971096 2440.182439086819 1.050788867788006 1.0780161021005934 0.854666557277378 0.8880326827492192 1.0016690121445821 1.0650683751868555 0.9868873021228683 0.934797394683822 1.0194980851079305 0.8989726568223457 1.0 11.2527732988955 -6.962780415669702 24.999894569338522 1.0059929994375987 0.9648060628395677 0.0 0.07313115071688614 370.0487506975215 248555.36067775267 0.009737448246093986 0.018402038416259515 1.0894808082385012e-07 6.962780415669702 -0.041186936598030965 FNS(ph)LPRPDPEPVPPVGSK ddPTM_A549_MK2206_60min_R1 2 FNSLPRPDPEPVPPVGSK 18 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FNS(1)LPRPDPEPVPPVGSK;FNS(1)LPRPDPEPVPPVGSK 85.06200000000001 2.2621e-05 13542500.0 3259.5 4228.7 3681.4 3791.8 4719.299999999999 3829.7 3425.1000000000004 3474.1 6178.200000000001 5228.4 5965.9 True False 3809.6239128760744 4443.922767761945 4203.477876796927 4720.791170220373 4025.0972216189075 4234.956312050884 4047.396334787483 3966.564313985037 4778.847564558086 4047.3008087184985 4484.402379536336 0.8495276717942446 0.9909732427314926 0.9373551972005565 1.052713554823436 0.8975771754975924 0.944374735723148 0.9025497696765477 0.8845246207355637 1.0656598494295226 0.902528467826067 1.0 12.130700019744902 -8.768020720251275 24.99980089399409 1.0310060415506905 0.9368110516559935 0.03465966637809459 0.06616686618237878 116.62119215369837 442994.63844850636 0.009405358903255095 0.010125583789094119 1.706000993512286e-09 8.768020720251275 -0.09419498989469699 FNS(ph)LPRPDPEPVPPVGSK ddPTM_A549_PD325901_60min_R1 2 FNSLPRPDPEPVPPVGSK 18 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FNS(1)LPRPDPEPVPPVGSK;FNS(1)LPRPDPEPVPPVGSK 90.53399999999999 1.6082e-06 23371000.0 4104.8 4392.9 4884.7 4919.6 5506.6 4942.4 5286.1 4619.7 5655.7 5403.0 6767.1 True False 4521.51627420595 4763.105099883891 5216.205116087296 5223.472518777749 5119.835412738707 4902.150733047497 5487.265428164909 4527.55645941546 5418.01059722654 5061.853657918254 5934.78960018129 0.7618663135198309 0.802573540220936 0.8789199731575922 0.8801445157580967 0.8626818737739771 0.8260024471461889 0.9245930854898866 0.7628840724660496 0.9129237870641677 0.8529120657897677 1.0 12.534981169094461 -14.999999999999998 0.09699618808739273 1.5382972985262466 0.7330024774180821 0.01972406217161471 0.06735449188042011 53.648575771219704 0.37597032647214373 5.757643320286597 0.3790017758444035 1.000000000000004e-15 14.999999999999998 -0.8052948211081645 FNS(ph)YDISR ddPTM_A549_PD325901_60min_R1 1 FNSYDISR 8 0 Q6IQ26-2;Q6IQ26;B4DFB6 Q6IQ26-2 DENND5A DENN domain-containing protein 5A 1 FNS(0.999)YDIS(0.001)R 80.834 0.0038347999999999998 5699100.0 1755.4 1882.7 1755.7 1803.1 2045.8 1963.0 1645.1 1719.6 1448.0 1644.8 1672.6 True False 1933.6069157428205 2041.3617363362257 1874.8523598817665 1914.473391862785 1902.1100656268559 1947.013978830576 1707.7051807332612 1685.3012289998962 1387.1455955556405 1540.9470472966755 1466.8808034849815 1.318175894830038 1.3916343655779022 1.2781218183696559 1.305132214774659 1.2967039047125484 1.3273157397689745 1.1641744691703202 1.1489012774562164 0.9456430217507054 1.0504923396882209 1.0 10.51853592921961 -8.261523888056445 1.3676055283384252 0.973544416802986 1.321467723567726 0.8831675962182699 0.048807668321220035 0.07167651738551041 0.26098033609653043 0.008086987454574274 0.0105317539714231 5.47615978909382e-09 8.261523888056445 0.3479233067647399 FNSIT(ph)SAYYR ddPTM_A549_PD325901_60min_R1 1 FNSITSAYYR 10 0 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 FNS(0.122)IT(0.862)S(0.016)AYYR 143.0 4.9703e-08 15558000.0 2835.6 2530.9 2718.7 2697.5 2760.8 2106.7 2443.6 2756.8 2788.6 3028.1 3009.5 True False 3123.4680245416084 2744.187825194322 2903.2073308711942 2864.118448533008 2566.8909322429504 2089.543733674158 2536.5925351892265 2701.8134613322386 2671.40483961772 2836.9052492212213 2639.35057879233 1.1834229410974244 1.039720849228738 1.0999703314137206 1.085160293424727 0.9725464107983205 0.7916885882701707 0.961066921374984 1.023666004448901 1.0121447529869476 1.0748497270564508 1.0 11.365967277877603 -6.719147415715793 6.092024529587158 0.985411729159229 1.0986312800993885 0.3996641473967959 0.07351207683556224 0.16813420400378407 15.416339151442132 0.010376550150650924 0.02154112086198798 1.9092050932790357e-07 6.719147415715793 0.11321955094015945 FNVS(ph)TGNTRAALAT(ph)LER ddPTM_A549_MK2206_60min_R1 1 FNVSTGNTRAALATLER 17 1 C9JVJ9;Q8N434-2;Q8N434 C9JVJ9 SVOPL Putative transporter SVOPL 2 FNVS(0.927)T(0.032)GNT(0.042)RAALAT(0.999)LER 50.07899999999999 0.041156 72338000.0 769.35 807.99 891.3 986.06 719.94 1003.4 811.16 564.35 1009.7 845.49 1076.5 True False 899.1974711984072 849.1132397956751 1017.6997423776554 1227.6447442659155 614.0377796987509 1109.579121996986 958.5372721748896 644.34834074939 781.0045621595764 654.4932217816928 809.1753401114444 1.1112516986424283 1.0493562985727298 1.2576998975741054 1.5171554092303865 0.7588439109058638 1.3712468324160352 1.1845853731069884 0.7963024931786065 0.9651858175164012 0.8088398018797164 1.0 9.660308543727979 -8.22037258756981 23.122432246025458 0.9690562997195235 1.1809509152256334 0.30964701515855075 0.19352819323217865 227.76241269239017 128240.21063609341 0.028205968407979776 0.036413365772028215 6.0204286310146685e-09 8.22037258756981 0.21189461550611 FNVWDTAGQEK ddPTM_A549_MK2206_60min_R1 1 FNVWDTAGQEK 11 0 B5MDF5;J3KQE5;P62826;F5H018;H0YFC6 B5MDF5 RAN GTP-binding nuclear protein Ran 0 115.33 5.8711e-05 1959300.0 3692.4 3772.0 3851.8 2704.9 5288.0 3667.4 3935.8 3905.3 5900.3 5097.4 6136.4 False True 4315.58684948723 3963.978688485361 4398.043159082526 3367.600621427577 4510.142204971245 4055.4818337769057 4650.883914179609 4458.888234479655 4563.891470842973 3945.8937997019466 4612.562523975725 0.9356159026691044 0.8593875243708725 0.9534923670349952 0.7300932190995923 0.9777953537817412 0.8792253357427333 1.0083080478594475 0.9666835324838886 0.9894481531947235 0.8554667344218125 1.0 12.17135275191498 -7.646807994665001 1.7001921989918134 0.994051779149779 0.8818064913768233 0.11888025579453654 0.07560333645835476 0.24838355548820884 1.4586946007380295 0.009176970964266284 0.014874341450497616 2.2552360510838038e-08 7.646807994665001 -0.11224528777295573 FPDENFK ddPTM_A549_PD325901_60min_R1 1 FPDENFK 7 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 77.058 0.048194 3365200.0 2594.0 2878.0 2607.7 2886.2 3353.6 3110.9 3385.1 3258.8 3463.3 2820.6 3284.1 False True 2857.3409703981292 3120.539160341879 2784.674203373972 3064.4740189642143 3118.054705291929 3085.565861815608 3513.9218328977945 3193.8006775208546 3317.7495449501716 2642.506834633393 2880.1765196251504 0.992071475803159 1.0834541352166884 0.9668415058589507 1.0639882653314074 1.0825915300836277 1.0713113730325072 1.2200369695934903 1.1088906029747516 1.1519257664741918 0.9174808615470937 1.0 11.491941518615706 -6.492250005243737 8.12566610766114 1.0876264476935018 1.0200085426000165 0.1093862746417521 0.07785320247962513 0.41882129434648663 98.9549790448686 0.010261749732707852 0.02344048944070171 3.219215089746755e-07 6.492250005243737 -0.06761790509348531 FPDRLAEDEGDS(ph)EPEAVGQSR ddPTM_A549_MK2206_60min_R1 2 FPDRLAEDEGDSEPEAVGQSR 21 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 FPDRLAEDEGDS(1)EPEAVGQSR;FPDRLAEDEGDS(1)EPEAVGQSR 143.19 4.0802999999999997e-22 16330100.0 2437.8 3089.4 3282.8 2528.6 3548.5 2456.42 2148.2 2358.0 3991.2 4499.1 4199.7 True False 2849.2410415122854 3246.6372641056932 3748.3504030936474 3148.1071135131674 3026.5203506695257 2716.356733960371 2538.5001332488014 2692.2537210721384 3087.1995726367263 3482.7501852393452 3156.7985841765294 0.9025729597682038 1.028458793785413 1.187389788465528 0.9972467452605535 0.9587309009323484 0.8604783173611786 0.8041375037270504 0.8528430462960404 0.9779526600497515 1.1032538479637726 1.0 11.624246498787933 -5.219367791744071 20.74988565354656 0.9739348246800402 0.9025711117045727 0.03862387367738607 0.10578544659600295 7607.373964474215 3751257.2826031907 0.014358655346518964 4.524422532691396 6.034373788336137e-06 5.219367791744071 -0.07136371297546751 FPDRLAEDEGDS(ph)EPEAVGQSR ddPTM_A549_PD325901_60min_R1 2 FPDRLAEDEGDSEPEAVGQSR 21 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 FPDRLAEDEGDS(1)EPEAVGQSR;FPDRLAEDEGDS(1)EPEAVGQSR 159.13 4.2363999999999995e-28 33570000.0 5515.2 5582.2 6388.7 6194.1 6146.5 6599.0 6439.7 6886.8 6710.9 6888.6 7302.5 True False 6075.099043924351 6052.6315847326005 6822.2756003740005 6576.695489178236 5714.791044273865 6545.2599318914745 6684.766307439053 6749.437371409914 6428.864210783389 6453.652620384167 6404.33879436152 0.9485911409422879 0.9450829787551889 1.0652583848906367 1.0269124886035794 0.8923311567004008 1.0220040104146308 1.0437871140303236 1.0538851219664118 1.003829500157528 1.0077000651598982 1.0 12.644833914192816 FPEAEALS(ph)PEQAAHYLR ddPTM_A549_MK2206_60min_R1 2 FPEAEALSPEQAAHYLR 17 0 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR 87.49 2.3952e-06 5516200.0 578.5799999999999 670.75 847.13 805.0 697.0699999999999 765.24 746.95 749.4200000000001 733.81 1031.78 957.95 True False 676.2301590771094 704.8883099951107 967.2657721983436 1002.2250361378233 594.5319264030454 846.2171888747987 882.6611463225928 855.6525800024943 567.603206653777 798.7001813976686 720.0645769249963 0.9391243240501014 0.9789237418195251 1.3433042024216897 1.391854381197004 0.8256647326576839 1.1751962476595244 1.2258083158207251 1.188299782300805 0.7882670872072352 1.109206322589124 1.0 9.491982486095944 -8.75223906501139 24.99632919004064 0.9000150109247228 1.1381759762989991 0.12198159553724774 0.17758082336399691 187.47110477455763 509339.55170743825 0.029796375108292084 0.033556885811125786 1.7691348389438232e-09 8.75223906501139 0.23816096537427633 FPEAEALS(ph)PEQAAHYLR ddPTM_A549_PD325901_60min_R1 2 FPEAEALSPEQAAHYLR 17 0 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR 101.49 5.089399999999999e-09 8699300.0 1049.8 1183.9699999999998 1368.24 987.5899999999999 1032.38 1111.2199999999998 842.54 1145.38 1184.65 1217.38 1279.54 True False 1156.3749231780862 1283.7473070430758 1461.0969942955098 1048.5911913203759 959.8691903176525 1102.1705927438168 874.6033207555786 1122.534497366772 1134.8632802313468 1140.51441904063 1122.1646916723507 1.0304859275644758 1.1439918904683413 1.302034367271039 0.9344360940083322 0.8553728320280414 0.9821825627941145 0.7793894490230004 1.0003295467208742 1.0113161540843632 1.016352080496253 1.0 10.132068709648678 -6.284430378436771 24.80643665143844 0.9727874354334131 1.157352869110639 0.49340156824378645 0.09285178340810268 484.43971625122947 522691.6776501837 0.01336330380926159 0.031071101956574802 5.194809446009963e-07 6.284430378436771 0.1845654336772259 FPFGIS(ph)PAQSHR ddPTM_A549_MK2206_60min_R1 2 FPFGISPAQSHR 12 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 FPFGIS(1)PAQSHR;FPFGIS(1)PAQSHR 58.071000000000005 0.0039643000000000005 3113400.0 473.9 628.24 655.97 645.3199999999999 751.74 698.46 624.81 455.64 956.53 987.66 737.37 True False 553.8827342573929 660.214732570001 748.9964097469666 803.4234289695156 641.1600418239562 772.3705735997758 738.3298893283603 520.2283653389775 739.877482264534 764.5469200403395 554.260678623294 0.9993181108087267 1.191162855373183 1.3513432192364232 1.4495407304828245 1.1567842831941608 1.3935150072674038 1.3320986276029332 0.9385987233140045 1.334890802829972 1.379399530811688 1.0 9.114420850714776 -10.957674655292905 0.9686334481698705 0.9843263851002387 1.2513847438641472 0.0 0.18943602995774467 0.7108987156763173 1.0623814049388345 0.14380561369194575 0.026211941976895158 1.1023648191202254e-11 10.957674655292905 0.2670583587639085 FPFGIS(ph)PAQSHR ddPTM_A549_PD325901_60min_R1 2 FPFGISPAQSHR 12 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 FPFGIS(1)PAQSHR;FPFGIS(1)PAQSHR 102.5 6.4487e-05 6131900.0 1007.3 1112.4099999999999 1068.19 1167.58 1416.1399999999999 1184.6799999999998 1033.65 1287.01 1651.95 986.99 1196.79 True False 1109.5603544649332 1206.1566947032336 1140.6837969482845 1239.6987648334264 1316.6752118177808 1175.0323588594013 1072.986116384983 1261.3395759101872 1582.5242863108701 924.6712829592328 1049.592417076881 1.057134499461289 1.1491667385158753 1.08678738373996 1.18112397218531 1.254463342527499 1.1195130030873042 1.0222883653954489 1.2017422719411626 1.507751257119603 0.8809812913230127 1.0 10.035613486821902 -8.514236085323606 24.805933589383322 1.2458227469703191 1.1295184575838175 0.0 0.16499830504203078 797.1859494838124 2288066.9111281647 0.031218357159282985 0.03629880630735385 3.0602993826575245e-09 8.514236085323606 -0.11630428938650161 FPPEDFRHS(ph)PEDFR ddPTM_A549_MK2206_60min_R1 5 FPPEDFRHSPEDFR 14 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR 143.39 2.2788000000000003e-13 87848100.0 31431.73 32903.61 28831.02 27262.07 42266.38 36251.13 33026.07 34410.81999999999 49453.86 44341.880000000005 46162.409999999996 True False 36736.63759198169 34578.26320631861 32919.69216479867 33941.27837384085 36049.051491935 40087.20051504744 39026.47942262561 39288.65911371652 38252.63967158659 34325.01851122688 34699.00957929766 1.0587229444698543 0.996520178113352 0.9487213774666186 0.978162742549606 1.0389072174971477 1.1552837098544888 1.124714506142845 1.1322703324984 1.1024130122264102 0.9892218517875534 1.0 15.082606863810398 -6.955790146476011 5.957832710190316 1.0705672474929566 0.9934240477377307 0.34910441246037893 0.054824700752732144 0.21385289374249117 18.512257541069363 0.009156910117311283 0.017361813696862335 1.1071586399951086e-07 6.955790146476011 -0.07714319975522588 FPPEDFRHS(ph)PEDFR ddPTM_A549_PD325901_60min_R1 16 FPPEDFRHSPEDFR 14 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR 148.44 1.1939e-13 157246100.0 49422.58 53382.53 52726.920000000006 55346.774 57666.26 53278.840000000004 51770.27 53621.94 58910.6 60571.06999999999 63451.60999999999 True False 54439.92393861956 57881.263149105296 56305.28586392727 58765.41852833619 53615.98083539709 52844.95479158308 53740.415954628756 52552.40834110183 56434.79234912993 56746.60230307653 55647.464222895935 0.9783001741204312 1.04014197155978 1.011821233010662 1.0560304831312939 0.9634936934527377 0.9496381466712049 0.9657298262391886 0.9443810077419367 1.0141484996168082 1.0197518089194144 1.0 15.764028327019567 -4.892735117536434 15.540358449964685 0.9993624302435716 0.00014468542318182278 0.015974942381258295 0.03513273741825974 4549425.72512768 5681613.893254699 0.004898690488589388 157863805.33220974 1.2801618552638648e-05 4.892735117536434 -0.9992177448203898 FPPEDFRHS(ph)PEDFRRPR ddPTM_A549_PD325901_60min_R1 1 FPPEDFRHSPEDFRRPR 17 3 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 FPPEDFRHS(1)PEDFRRPR 58.49 0.0010599000000000001 4653600.0 315.78 460.09 412.83 564.83 498.26 523.71 486.26 491.04 545.14 654.3 727.4 True False 347.8377531350505 498.8633989859955 440.84712634845886 599.7182662779975 463.26393650368465 519.4450793954973 504.7648903916817 481.245821986572 522.2296615754152 612.9873863364635 637.9344113685132 0.5452562942777457 0.78199794539351 0.6910539994272175 0.9400939275112413 0.7261936779831002 0.8142609493053845 0.791248882951536 0.7543813492584468 0.8186259469137506 0.9608940596596244 1.0 9.317264292044529 -14.9999999999999 0.09649284889829497 1.7725842583618383 0.5917144408493483 0.5496827765926067 0.0835958115705997 59.42774092541674 0.4146141485548738 9.30361928012369 0.6204341421843822 1.000000000000229e-15 14.9999999999999 -1.18086981751249 FPQLRLS(ph)QK ddPTM_A549_PD325901_60min_R1 2 FPQLRLSQK 9 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 FPQLRLS(1)QK;FPQLRLS(1)QK 73.781 0.00061486 7798200.0 3365.3999999999996 3546.8 3559.0 3156.7 4426.4 3403.2 3362.5 3237.5 3370.0 3151.6000000000004 3791.4 True False 3707.052930523461 3845.7012834956827 3800.535142005585 3351.6821896141405 4115.504934251008 3375.4854675273655 3490.461777530601 3172.925522730382 3228.3706194906813 2952.60743814458 3325.08183566481 1.1148756974224305 1.1565734239219954 1.142989956289516 1.0079999095553123 1.2377153819518438 1.0151586139390394 1.049737104239639 0.9542398291367147 0.9709146358033042 0.8879803818585541 1.0 11.699174132781149 -7.450335368412952 8.457291065319135 0.9892395257942654 1.127367763972555 0.5940193714846432 0.06272155555944896 0.17792711838779657 19.379631637050878 0.0076494752843358806 0.01222663860194692 3.5453950302066095e-08 7.450335368412952 0.13812823817828956 FPRT(ph)PENSAK ddPTM_A549_MK2206_60min_R1 1 FPRTPENSAK 10 1 Q14159-2;Q14159-3;Q14159 Q14159-2 SPIDR DNA repair-scaffolding protein 1 FPRT(0.998)PENS(0.002)AK 44.511 0.022139 5131200.0 1965.6 2441.5 2260.7 1681.1 2847.1 2328.6 2011.2 2350.3 3323.2 3324.3 3111.2 True False 2297.3452256938845 2565.7619215103437 2581.3012538911344 2092.969575467446 2428.295361530563 2575.0109064004187 2376.6090066055276 2683.46222249188 2570.5005060599233 2573.3383211733794 2338.6031752482368 0.9823578664430861 1.0971343700660094 1.1037790768487843 0.8949656776401504 1.0383528882675042 1.101089288535276 1.0162515093452127 1.1474636872529849 1.0991606157325393 1.1003740815926268 1.0 11.191431364107592 -7.0040423688234235 24.976061042959298 1.057649239896515 1.0230589539451378 0.10774122270850306 0.06647409449646072 476.5868308815356 2944665.7526114513 0.010167718810726855 0.01889257413369778 9.907352862020085e-08 7.0040423688234235 -0.03459028595137714 FPRT(ph)PENSAK ddPTM_A549_PD325901_60min_R1 2 FPRTPENSAK 10 1 Q14159-2;Q14159-3;Q14159 Q14159-2 SPIDR DNA repair-scaffolding protein 1 FPRT(1)PENSAK;FPRT(0.999)PENS(0.001)AK 55.196000000000005 0.0069968 15893700.0 4678.8 5107.7 5216.7 5524.7 5942.799999999999 5421.7 5492.9 5843.1 5505.5 6434.5 6000.299999999999 True False 5153.788331649486 5538.143804474712 5570.736632565477 5865.948171495944 5525.398229547013 5377.547472758904 5701.935315330216 5726.5547866767265 5274.122980891974 6028.224571881362 5262.301139035594 0.9793792098705331 1.0524186393273705 1.0586122848884336 1.1147116093342728 1.049996585820559 1.0219003684278758 1.0835440931028117 1.0882225542353159 1.0022465156485794 1.1455491452520972 1.0 12.361478094808254 -8.784430705657813 24.074157624029546 1.001060833080159 1.057584647946315 0.0 0.05496300324152122 115.70497581710124 121153.69371717579 0.005747624314434565 0.006121186455631958 1.6427417482636077e-09 8.784430705657813 0.056523814866155986 FPS(ph)PHPS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 FPSPHPSPAK 10 0 O14681-3;O14681;B7ZB74 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 2 FPS(1)PHPS(1)PAK;FPS(1)PHPS(1)PAK 48.467 0.010856999999999999 23932000.0 3414.1 3069.9 3008.8 3415.6 3562.9 2931.2 3305.7 3339.7 3298.3999999999996 3271.5 3767.7 True False 3760.696918672418 3328.611246814989 3212.99526138421 3626.573854609579 3312.6541953377277 2907.3292790362634 3431.50022244845 3273.0870635560323 3159.779718494974 3064.9369316823163 3304.296785418129 1.1381232264814662 1.0073584375060254 0.9723688488162345 1.0975327248489481 1.0025292552280656 0.8798632410582233 1.0384963716309232 0.9905548066990153 0.9562638962816812 0.9275610305974608 1.0 11.690127557261345 -2.000000000000825 0.8489727183930489 0.9829066346701615 52.56559709757829 0.3984060395173611 0.053619007333651755 480.16905363865743 1.2639289497029425 0.007640008631089481 47857.60629272186 0.009999999999981002 2.000000000000825 51.58269046290813 FPSPHPS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 FPSPHPSPAK 10 0 O14681-3;O14681;B7ZB74 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 1 FPS(0.131)PHPS(0.869)PAK;FPS(0.197)PHPS(0.803)PAK 55.04 0.0055271999999999995 6635300.0 2415.5 2845.2 2234.18 2698.69 2998.6 3257.2 2604.8 2910.0 2945.6 3152.8 3270.1000000000004 True False 2660.7197818028835 3084.974989230267 2385.8048900157446 2865.381952130321 2787.9886806084146 3230.6744431212182 2703.927089401251 2851.957767149163 2821.8066755999266 2953.7316699397866 2867.898430871839 0.9277594189394032 1.075691857152848 0.8319000646373873 0.9991225356119907 0.9721364782646322 1.1264954185072362 0.9428252619738905 0.9944416916753115 0.9839283864533861 1.0299289675477992 1.0 11.48577821530153 FPSS(ph)PLR ddPTM_A549_MK2206_60min_R1 4 FPSSPLR 7 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 FPS(0.002)S(0.998)PLR;FPS(0.002)S(0.998)PLR;FPS(0.036)S(0.964)PLR;FPS(0.019)S(0.981)PLR 121.67 0.0064759 50216700.0 9550.8 9342.9 7649.15 8314.1 10031.8 8990.2 8155.6 9822.1 12072.800000000001 11458.8 11697.3 True False 11162.74154535875 9818.413703247586 8733.914489406541 10351.054873234136 8556.135509045107 9941.53699678822 9637.366952203676 11214.412753919702 9338.330076300022 8870.249121517767 8792.53758094342 1.269569955498673 1.116675773388516 0.9933326311093698 1.177254550002559 0.9731133282374952 1.1306789314537697 1.0960848177767593 1.2754466672084919 1.0620745137944625 1.0088383518249355 1.0 13.102063880873185 -9.074345167520379 4.197098692386323 1.0250297799633017 1.1217096265281692 0.21273481488725055 0.0903127160762508 0.23707493392923557 8.606188531198978 0.01619121921523129 0.01605578946895096 8.42664760485136e-10 9.074345167520379 0.0966798465648675 FPSS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 FPSSPLR 7 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 FPS(0.002)S(0.998)PLR;FPS(0.002)S(0.998)PLR 120.87 0.0065764 80241000.0 10543.7 10428.7 10356.3 9363.6 12972.0 9356.6 9182.7 9243.4 9894.3 10116.2 10533.7 True False 11614.088662138309 11307.563148525838 11059.140795490997 9941.968305721466 12060.89147097056 9280.402951770846 9532.152673466248 9059.033135692975 9478.476979355093 9477.461405558508 9238.121678625943 1.2571915662260211 1.2240110643582365 1.1971200618712687 1.0761893652823387 1.3055566803017549 1.004576825746161 1.0318280062840695 0.980614182280439 1.0260177673655517 1.0259078344341708 1.0 13.17338383322987 -7.280326382060088 24.673212018838843 1.0110795556032064 1.2043070371831406 0.7743518076715936 0.05382549023800002 232.07649686278262 303174.68476862385 0.007498428458785119 0.011999572736784321 5.244132038178152e-08 7.280326382060088 0.1932274815799342 FPSSGPVT(ph)PQPTALTFAK ddPTM_A549_MK2206_60min_R1 2 FPSSGPVTPQPTALTFAK 18 0 Q9Y679 Q9Y679 AUP1 Ancient ubiquitous protein 1 1 FPSSGPVT(0.975)PQPT(0.025)ALTFAK;FPSSGPVT(0.554)PQPT(0.445)ALTFAK 113.29 8.924400000000001e-10 10498900.0 3237.3 2887.2 4164.200000000001 2928.9 4705.2 4190.3 3500.1000000000004 3089.8 5002.0 5179.1 4680.2 True False 3783.6770956139653 3034.1461477717226 4754.7461766061215 3646.480631483316 4013.0713129407504 4633.714764703979 4136.022863971761 3527.788612115647 3869.0549865526423 4009.1377129588327 3517.977173051168 1.0755263350194948 0.8624689696721894 1.3515568585916362 1.0365276555563026 1.1407326186429412 1.317153164096606 1.175682120866224 1.0027889433563235 1.0997953642766198 1.1396144760887341 1.0 11.78053040634839 -9.990271467954265 0.6381117260487378 1.0036241291015537 1.1254439409024413 0.0 0.13522349949152737 1.3030188499219626 1.0569998048933564 0.07567919204216772 0.02921991649724702 1.0226535541476962e-10 9.990271467954265 0.12181981180088752 FPSSGPVT(ph)PQPTALTFAK ddPTM_A549_PD325901_60min_R1 2 FPSSGPVTPQPTALTFAK 18 0 Q9Y679 Q9Y679 AUP1 Ancient ubiquitous protein 1 1 FPS(0.001)S(0.004)GPVT(0.995)PQPTALTFAK;FPSSGPVT(0.959)PQPT(0.041)ALTFAK 198.51 1.4275e-48 21395000.0 3857.3 3156.0 5132.9 4962.2 5066.2 5162.700000000001 5483.7 5713.700000000001 4964.299999999999 5193.6 4394.9 True False 4248.890256405821 3421.9671959829625 5481.249460635141 5268.703824026131 4710.367589441189 5120.656682887729 5692.38520429578 5599.7357711890645 4755.667734818275 4865.675209654676 3854.355161566508 1.1023608563044212 0.8878183386172924 1.422092472248308 1.3669481931926575 1.2220896601357245 1.3285378405052233 1.476870959131397 1.45283336289985 1.2338426365684088 1.2623837206733024 1.0 11.912273800307858 -10.134904380800078 0.9704896148923511 1.0227655188217075 1.2795613856048513 0.030527204942876085 0.1778111185073239 0.5076270763734482 0.9540056335335171 0.07067435300646212 0.03313503772637669 7.329858978648259e-11 10.134904380800078 0.2567958667831438 FPT(ph)PKPR ddPTM_A549_MK2206_60min_R1 1 FPTPKPR 7 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 FPT(1)PKPR 40.352 0.046224 6023600.0 1690.2 2107.6 1798.0 1858.5 2960.4 2283.2 1969.1 2112.8 2845.2 2937.7 3379.9 True False 1975.4644385774332 2214.867837712552 2052.9834363233767 2313.8325834312363 2524.9290816181665 2524.8067085345006 2326.8599815567536 2412.295870178632 2200.766742850774 2274.0715296787416 2540.577549505501 0.7775651008810727 0.8717969810225454 0.808077453381799 0.9107506219920749 0.9938405864090312 0.9937924189820264 0.9158783529397301 0.9495068830503373 0.8662466309202536 0.895100222436181 1.0 11.310940786813637 -6.383000317207992 4.2371833096104785 0.9427866611586019 0.8247260567099411 0.5961965514319542 0.04501546208766143 0.1545945001449096 4.604295049270233 0.007834666231890691 0.01892447567120867 4.1399937243514303e-07 6.383000317207992 -0.11806060444866073 FPT(ph)PKPR ddPTM_A549_PD325901_60min_R1 2 FPTPKPR 7 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 FPT(1)PKPR;FPT(1)PKPR 56.729 0.014611 17220700.0 4918.4 3980.3999999999996 4650.8 5087.6 4733.4 4783.799999999999 4351.6 4754.3 5042.9 4331.6 4664.3 True False 5417.712347265285 4315.842277215014 4966.431255532337 5401.84949722207 4400.942313343517 4744.8423188638335 4517.202519286892 4659.471756823805 4830.96445015714 4058.102036764519 4090.620669433815 1.324423060722263 1.0550580525503415 1.2141021270055194 1.320545201755347 1.0758617503276473 1.1599321233373052 1.1042829155586604 1.139062292341256 1.1809856842154463 0.9920504404350461 1.0 11.998104044400872 -14.999999999997627 0.20092652948139844 0.18223116922301125 1.2037522307844144 0.44501983231225295 0.08042673554670111 34.519589640407496 0.4071207241253707 11.120961597499923 0.06583496115916702 1.0000000000054645e-15 14.999999999997627 1.0215210615614032 FPTTATKIS(ph)PK ddPTM_A549_MK2206_60min_R1 1 FPTTATKISPK 11 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 FPT(0.013)T(0.014)AT(0.054)KIS(0.919)PK 43.813 0.017575 36034000.0 3743.6 3371.4 3863.5 3284.4 6381.5 4022.6 3357.1 3579.6 6575.5 4635.4 5385.8 True False 4375.428157767414 3542.9898595863065 4411.402395014107 4089.078147442316 5442.789803521931 4448.268862014227 3967.041614993741 4087.019262065235 5086.159748915811 3588.2599205748857 4048.357219481857 1.0807910272126178 0.8751673005871177 1.0896771593635988 1.010058630143728 1.3444440567965852 1.098783684554288 0.9799139255555804 1.0095500570941036 1.2563515206710887 0.8863496292538486 1.0 11.983120881027602 -6.1403190639610505 2.3788182529563455 1.1148271615731513 0.9832989048847662 0.0 0.1357383484056522 0.4705301246470824 5.1205182306772175 0.018707650554850484 0.0625671281473596 7.239039327736651e-07 6.1403190639610505 -0.13152825668838508 FPTTATKIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 FPTTATKISPK 11 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 FPT(0.024)T(0.017)AT(0.083)KIS(0.876)PK;FPTTATKIS(1)PK 73.887 0.00040643 92158000.0 9489.8 9094.0 9949.3 9703.7 11112.8 10082.5 10737.8 11344.400000000001 9882.599999999999 10562.1 11432.599999999999 True False 10453.197509978472 9860.38329539578 10624.51932800117 10303.075510298328 10332.275265078757 10000.391462842217 11146.432854949615 11118.127042490363 9467.268689667239 9895.20720346074 10026.462677222527 1.04256085585651 0.9834358948740681 1.0596478209745166 1.0275882773397433 1.0305005461747696 0.9973997594944888 1.1117014258948337 1.1088783153552058 0.944228188389348 0.9869090946640668 1.0 13.291525094359153 -8.781540965517346 24.999945365529914 0.9736633107204818 1.0431804293958284 0.37082926331113797 0.039413412007726814 190.75942862377804 237242.92467122816 0.007422168919427352 0.007906407115962943 1.6537087887039799e-09 8.781540965517346 0.0695171186753466 FPTTATKIS(ph)PKEEER ddPTM_A549_MK2206_60min_R1 3 FPTTATKISPKEEER 15 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 FPT(0.001)T(0.004)AT(0.009)KIS(0.985)PKEEER;FPT(0.007)T(0.007)AT(0.066)KIS(0.92)PKEEER;FPT(0.001)T(0.003)AT(0.003)KIS(0.993)PKEEER 57.826 0.0019803 175106300.0 14455.1 17552.1 16328.0 13386.9 17043.2 14881.7 14390.8 13872.7 17040.399999999998 22371.899999999998 22790.300000000003 True False 16894.767486735687 18445.426918919387 18643.55592229593 16666.69110096078 14536.167856990523 16456.47161632704 17005.42208246758 15839.197708361953 13180.776607927155 17318.072252040645 17130.839529718403 0.9862194702966436 1.0767380598551781 1.0883036928781735 0.9729056811283285 0.8485379733884805 0.9606342752658749 0.9926788499166517 0.9246013705798993 0.7694180186009728 1.0109295707310453 1.0 14.064308234747351 -6.506981051078105 4.8541156784134 0.902091952246906 1.0511835443595539 0.2955443185646699 0.07410338859244658 0.1668713389943484 10.63791006556763 0.013080249041052358 0.029709302779633483 3.1118521089351426e-07 6.506981051078105 0.14909159211264789 FPTTATKIS(ph)PKEEER ddPTM_A549_PD325901_60min_R1 4 FPTTATKISPKEEER 15 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 FPTT(0.003)AT(0.284)KIS(0.713)PKEEER;FPT(0.01)T(0.01)AT(0.009)KIS(0.971)PKEEER;FPTT(0.001)AT(0.005)KIS(0.994)PKEEER;FPT(0.001)T(0.001)AT(0.001)KIS(0.997)PKEEER 106.39 9.639499999999999e-07 376926000.0 37348.399999999994 33229.0 34028.3 34426.3 38163.0 35826.6 35170.6 37837.700000000004 38101.9 36682.8 41537.4 True False 41139.982073561114 36029.32444718566 36337.66506679088 36552.73436319997 35482.56253520273 35534.84004787135 36509.03642909077 37082.99739039858 36500.60964592644 34366.6417476742 36428.563127273155 1.1293330985860552 0.9890405043236911 0.9975047585554035 1.0034086229394497 0.9740313503784018 0.9754664196806407 1.002209071533688 1.0179648662188234 1.0019777480215613 0.9433982237401165 1.0 15.152782470703723 -5.259006380015885 24.989126688335144 0.9982040825421479 1.1293331448887016 0.7848549960765236 0.020539423076330825 47.55752892255487 488429.80867091817 0.0017344023305083673 0.016142920071534613 5.507996048081424e-06 5.259006380015885 0.13112906234655375 FPVSITS(ph)PNR ddPTM_A549_PD325901_60min_R1 1 FPVSITSPNR 10 0 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 FPVS(0.009)IT(0.339)S(0.652)PNR 47.706 0.032628 2150800.0 1307.6 1148.3 1250.8 980.24 1515.6 1306.1 1157.4 1304.9 1410.2 1134.5 1746.6 True False 1440.3465893957566 1245.0712709592003 1335.6868096714202 1040.787198513437 1409.1494845361535 1295.4635546360753 1201.4454903535818 1278.8727458257533 1350.9341981025996 1062.867476385018 1531.7792726096309 0.9403094918120258 0.812826817298567 0.871983864487123 0.6794629076944549 0.9199429119676245 0.8457246927157109 0.7843463557949361 0.8348936225302156 0.8819379020588699 0.6938776985630922 1.0 10.580992706432834 -9.90197109396467 0.6513513134864283 0.9960332324752236 0.8317315325654315 0.0 0.11109663478474241 0.4437031878713566 0.3848646436871989 0.03406287337680451 0.014472820095497307 1.2532245850470003e-10 9.90197109396467 -0.16430169990979204 FQAGT(ph)WSR ddPTM_A549_PD325901_60min_R1 2 FQAGTWSR 8 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 FQAGT(0.999)WS(0.001)R;FQAGT(0.997)WS(0.003)R 117.71 0.0013335 20777500.0 6670.1 5970.1 5142.200000000001 5258.7 5632.799999999999 5783.1 4698.700000000001 4905.1 8564.5 7361.8 8667.7 True False 7347.243641731906 6473.2212790677695 5491.180614560585 5583.5179556257735 5237.171560105071 5736.004350980691 4877.511599727297 4807.26393252349 8204.563848851025 6896.974691627353 7601.627849077353 0.9665355615407661 0.8515572463670997 0.72236904036641 0.734516088722164 0.6889539535588726 0.7545757915098275 0.6416404086815832 0.6323992739406431 1.079316695284794 0.9073023342578489 1.0 12.892092681943945 -8.77012447451362 24.99986305996775 1.037455126663016 0.7457084846103642 0.5414624682119055 0.09895018001040574 80.78709567998372 232543.27097425694 0.016725491535540555 0.017938770344637724 1.697756983229112e-09 8.77012447451362 -0.2917466420526519 FQAPISAPEYTVT(ph)PSPQQAR ddPTM_A549_PD325901_60min_R1 1 FQAPISAPEYTVTPSPQQAR 20 0 Q9GZY8;E9PK16 Q9GZY8 MFF Mitochondrial fission factor 1 FQAPISAPEY(0.001)T(0.067)VT(0.558)PS(0.375)PQQAR 99.891 1.4439e-07 1794800.0 1073.4 667.26 693.35 1208.3 1148.9 803.31 878.94 1292.2 790.76 985.77 998.0 True False 1182.370777804685 723.4923419491739 740.4049004522541 1282.9339467515963 1068.2052274898313 796.7681096965816 912.3885426744228 1266.4260572887106 757.5271071419738 923.5283139674392 875.2523268432448 1.350891327611911 0.826610018345886 0.8459330843742602 1.4657875305270296 1.2204540276316727 0.9103296103996311 1.0424291540761925 1.4469268100735069 0.8654956792564401 1.0551566509949313 1.0 9.773555181813535 FQAPISAPEYTVTPS(ph)PQQAR ddPTM_A549_MK2206_60min_R1 1 FQAPISAPEYTVTPSPQQAR 20 0 Q9GZY8;E9PK16 Q9GZY8 MFF Mitochondrial fission factor 1 FQAPISAPEY(0.001)T(0.003)VT(0.028)PS(0.968)PQQAR 79.97 0.00021843 1070700.0 0.0 498.88 350.72 515.36 682.88 539.84 381.88 485.86 864.82 698.65 724.7 True False 0.0 524.2708611112348 400.457369737116 641.6232231353898 582.4292566056658 596.96551048321 451.26265286521397 554.7321428838466 668.9396508337575 540.824479766502 544.7369892975048 0.0 0.962429340051493 0.735138934210338 1.1778587386966872 1.0691935154922547 1.0958784187816204 0.8284046461525667 1.018348586166751 1.2280048243032384 0.9928176172944518 1.0 9.089416023658124 -5.294823089681236 3.71847922815481 1.0626498199974428 1.736445022838278e-48 0.8045206192333327 0.1414990627203723 0.0793871911386406 2.018863099316709 0.021041958402547335 0.21779495238300062 5.071972735479767e-06 5.294823089681236 -1.0626498199974428 down FQAPISAPEYTVTPS(ph)PQQAR ddPTM_A549_PD325901_60min_R1 1 FQAPISAPEYTVTPSPQQAR 20 0 Q9GZY8;E9PK16 Q9GZY8 MFF Mitochondrial fission factor 1 FQAPISAPEYT(0.144)VT(0.107)PS(0.749)PQQAR 86.479 1.4935999999999999e-05 1846800.0 725.9 800.45 629.27 813.74 886.44 1062.9 712.7 1047.2 900.64 996.3 833.63 True False 799.592833620664 867.9067306795189 671.9760463079109 864.0028716623722 824.1795124519854 1054.244094803372 739.8221885044047 1026.312774487493 862.7892328599664 933.3934479703784 731.0987948159665 1.0936864337492704 1.1871264688625154 0.9191316564501545 1.1817867541142104 1.1273161962460208 1.4419994975764503 1.0119318944994762 1.4037949204195288 1.1801267338665895 1.27669947562331 1.0 9.513922563340117 -4.194946364857518 16.197198798925793 1.1267005164180224 1.1327499319074756 0.0 0.1600098269188248 0.0 0.0 0.020095375269061223 0.0 6.383423162665385e-05 4.194946364857518 0.006049415489453258 FQDGDLTLYQSNTILR ddPTM_A549_MK2206_60min_R1 2 FQDGDLTLYQSNTILR 16 0 P09211;A8MX94;A0A087X2E9 P09211 GSTP1 Glutathione S-transferase P 0 ; 128.9 1.468e-09 5904200.0 1867.88 2187.59 1930.42 2077.7799999999997 2200.07 1850.01 1895.42 1583.08 2786.3999999999996 2859.9 2790.7 False True 2183.1324787185035 2298.9289870476396 2204.182583507993 2586.8361932750868 1876.442617415107 2045.7768302627492 2239.79327928612 1807.4864379791704 2155.2848489664693 2213.8466037131875 2097.6921705982413 1.0407306225945896 1.0959324820247613 1.0507655100220838 1.2331819842457372 0.8945271588061292 0.975251211277255 1.0677416403987212 0.8616547572200228 1.0274552573420737 1.0553724873186803 1.0 11.034587267374619 -6.772068123365854 24.999934060363977 0.9960839823143173 1.1006092903654667 0.3709255168229918 0.07515786781472503 182.12228310534454 428371.2057835379 0.010029545553053383 0.01909620490486414 1.6901757901334415e-07 6.772068123365854 0.10452530805114946 FQDGDLTLYQSNTILR ddPTM_A549_PD325901_60min_R1 2 FQDGDLTLYQSNTILR 16 0 P09211;A8MX94;A0A087X2E9 P09211 GSTP1 Glutathione S-transferase P 0 ; 179.41 2.2683999999999998e-28 15934400.0 3953.7999999999997 3288.3 2794.2 3440.6000000000004 3531.0 3243.6 3777.0 3505.1000000000004 3803.1 4141.2 4015.9 False True 4355.186865366276 3565.416581289853 2983.8312148895766 3653.1180478304577 3282.994741288705 3217.185197012152 3920.7358018537043 3435.1880308022446 3643.268932636503 3879.7239252583877 3521.9697588875642 1.2365770189752818 1.0123359441950495 0.8472052343322897 1.0372371990452063 0.9321473397107359 0.9134619026451606 1.113222449443204 0.9753598883504525 1.0344407198394718 1.1015778643380012 1.0 11.782166806298486 -8.785604725043747 24.167591893116548 1.016263658919852 1.0019416656999625 0.0008392492821484021 0.10180832149738221 1348.954475907349 1349071.4750074823 0.016600759694329673 0.01767741015133771 1.6383069550546068e-09 8.785604725043747 -0.014321993219889473 FQDTDGK ddPTM_A549_PD325901_60min_R1 2 FQDTDGK 7 0 P52209-2;P52209;K7EPF6;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 94.302 0.033348 30247000.0 20184.6 19378.9 18311.2 21518.7 23316.0 20750.9 19823.6 22023.6 23992.0 22707.0 24706.0 False True 22233.72573288284 21012.02791325548 19553.908146190697 22847.861226486457 21678.364595833315 20581.91155033898 20577.997945890143 21584.322020820022 22983.699674427433 21273.276144799125 21667.31862423768 1.026141079958623 0.9697567233700448 0.9024609129215065 1.0544849421713025 1.0005097987336227 0.9499057962490784 0.9497251737864328 0.996169502795569 1.0607542203545763 0.9818139712498727 1.0 14.403233007514173 -8.534872182582484 20.914045109897746 1.0286775608510537 0.9779273590270219 0.09067093741579879 0.042731315567118164 35.24920455580036 61465.76978999801 0.007226866878093464 0.008201301148517885 2.9182857697108005e-09 8.534872182582484 -0.05075020182403178 FQEAKGDS(ph)PQEK ddPTM_A549_MK2206_60min_R1 1 FQEAKGDSPQEK 12 1 Q00059;H7BYN3 Q00059 TFAM Transcription factor A, mitochondrial 1 FQEAKGDS(1)PQEK 56.147 0.004733 2692100.0 1597.3 1882.8 1774.4 1602.2 2690.5 1739.2 1790.0 1455.4 3225.7 3064.3 2824.3 True False 1866.8851897643676 1978.6264779109854 2026.036601452836 1994.7390719254904 2294.7310140837976 1923.2409896124752 2115.219829864703 1661.707406975569 2495.0841003844184 2372.0725017512236 2122.9483632854185 0.8793832304405302 0.9320181838285109 0.9543503914138523 0.9396079087097932 1.080917017940339 0.9059292363739448 0.9963595283077188 0.782735668805413 1.1752919399900488 1.1173481855584406 1.0 11.051853565496506 -8.778777727284806 24.999998739910577 1.0827767380546331 0.9407694922599811 0.45207771965202936 0.07951963384692391 195.04344834471854 281230.1840335484 0.015381783950513714 0.01639361816848516 1.6642642059215408e-09 8.778777727284806 -0.14200724579465207 FQELLAS(ph)PAYR ddPTM_A549_MK2206_60min_R1 2 FQELLASPAYR 11 0 Q9NSI2;Q9NSI2-2 Q9NSI2 FAM207A Protein FAM207A 1 FQELLAS(1)PAYR;FQELLAS(1)PAYR 133.32 6.6964e-08 9236000.0 1806.41 2249.11 1653.37 1400.22 2732.7 2624.5 2171.32 2053.16 2830.0 3098.5 2570.6 True False 2111.2878455157143 2363.580092274473 1887.8427275383647 1743.2739628582644 2330.7234499857996 2902.2228479978944 2565.8207379786754 2344.201717538793 2189.0095185813616 2398.54669799829 1932.249075049214 1.0926582254733077 1.2232274414282087 0.9770183108977716 0.9021994034665864 1.2062230900156785 1.5019921010566277 1.3278933710517233 1.2131985196986506 1.132881649083262 1.2413237656419627 1.0 10.916065360293919 -4.191046051621171 16.352957481350806 1.118777254672043 1.1048978533110518 0.0 0.16923989012908153 0.0 0.0 0.02388243165984439 0.0 6.441009628600204e-05 4.191046051621171 -0.013879401360991084 FQELLAS(ph)PAYR ddPTM_A549_PD325901_60min_R1 2 FQELLASPAYR 11 0 Q9NSI2;Q9NSI2-2 Q9NSI2 FAM207A Protein FAM207A 1 FQELLAS(1)PAYR;FQELLAS(1)PAYR 115.57 2.0753000000000003e-05 16722700.0 2824.3 2595.3 2647.7 3012.3 3169.9 2646.4 3094.0 2566.4 2867.0 2863.3 2940.4 True False 3111.0208568602307 2814.0150392061405 2827.3888439135103 3198.362929570333 2947.2571595613317 2624.848595811123 3211.7438631017635 2515.211138698148 2746.509960261065 2682.510749346165 2578.7494407313393 1.2064067984743558 1.0912324380022276 1.0964185970358005 1.2402767322222938 1.14290171546309 1.017876554562319 1.2454656557059323 0.9753608082159498 1.0650549901746749 1.0402370649028232 1.0 11.332455887888065 -8.467885587637488 0.5124339019931065 1.01118405024145 1.1551182023847786 0.32371362419229444 0.0748478429377101 0.6388035536509586 0.3823587520123603 0.02434812390339502 0.02942071801810322 3.4049788007802373e-09 8.467885587637488 0.1439341521433286 FQELS(ph)QPR ddPTM_A549_PD325901_60min_R1 2 FQELSQPR 8 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 FQELS(1)QPR;FQELS(1)QPR 91.63600000000001 0.0026052 11659600.0 3659.2 3626.9 3649.3 3987.4 4337.9 3471.4 4064.6 3968.0 4115.200000000001 3960.0 3987.4 True False 4030.679290239334 3932.5515916066574 3896.963443023599 4233.692641957556 4033.220868942584 3443.130069339003 4219.2805772344645 3888.855127164218 3942.252454993489 3709.9649241821726 3496.9750782111755 1.1526188205782602 1.1245580833873985 1.114381245466877 1.210672809290719 1.153345614063031 0.9846024041727754 1.206551514628687 1.1120625798550166 1.127332156170266 1.0609068812923736 1.0 11.77189179912229 -10.903702495989897 0.45855928650811895 0.9574712250237968 1.1371388527823116 0.282440604287328 0.059240207054506076 1.5022024288973235 0.3698301526566951 0.12688988068626053 0.014198822685500292 1.2482382999924042e-11 10.903702495989897 0.17966762775851486 FQEQECPPS(ph)PEPTR ddPTM_A549_MK2206_60min_R1 2 FQEQECPPSPEPTR 14 0 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 FQEQECPPS(1)PEPTR;FQEQECPPS(1)PEPTR 204.23 9.886399999999999e-32 23266000.0 6406.2 7632.7 7814.799999999999 6148.8 8199.0 7025.4 6209.4 7161.1 9826.8 8552.599999999999 8740.0 True False 7487.409943447376 8021.171828102389 8923.056150266919 7655.256276030123 6992.937961149625 7768.823164916901 7337.5676042245195 8176.207854948981 7601.0454901750245 6620.561719961326 6569.616788271273 1.139702692676784 1.2209497276039867 1.3582308432658108 1.165251569878024 1.0644362048078826 1.1825382537968683 1.1168943091664445 1.244548672845873 1.156999827409288 1.0077546276033946 1.0 12.681593503948706 -14.99996813240764 0.17254904533353002 0.2246697491729186 1.2288570451776824 0.4826192906175548 0.07190492449975289 33.61207022537385 0.3639886308833444 8.736667084199267 0.09481715250410035 1.0000733805353386e-15 14.99996813240764 1.0041872960047638 FQEQECPPS(ph)PEPTR ddPTM_A549_PD325901_60min_R1 2 FQEQECPPSPEPTR 14 0 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 FQEQECPPS(0.997)PEPT(0.003)R;FQEQECPPS(1)PEPTR 207.52 6.8981e-33 34245000.0 9921.599999999999 10669.8 10249.7 11596.6 9765.099999999999 9857.8 10075.0 9061.400000000001 8780.8 10235.7 12422.2 True False 10928.83352810412 11568.981491666362 10945.306278453116 12312.895644210514 9079.233063766156 9777.521345143175 10458.409638251547 8880.663268469214 8411.773512054531 9589.41615516451 10894.348150813781 1.0031654374188292 1.0619250763343915 1.004677482941972 1.130209487870164 0.8333892893892839 0.897485669614186 0.9599848924848551 0.8151624260149838 0.7721227002853027 0.8802193598382666 1.0 13.411292256799763 -6.767903241030527 24.999161466880576 0.8863251593570243 1.0476096476840808 0.5936647082784313 0.06759792670200572 114.13236239460116 441411.80748871237 0.013203767282623747 0.025378318464289718 1.7064625392731991e-07 6.767903241030527 0.16128448832705655 FQEQECPPS(ph)PEPTRK ddPTM_A549_MK2206_60min_R1 1 FQEQECPPSPEPTRK 15 1 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 FQEQECPPS(1)PEPTRK 165.3 1.4978e-20 49992000.0 9278.4 10672.0 9447.0 7701.0 11641.0 9633.6 8975.6 10015.0 12834.0 12576.0 12677.0 True False 10844.367084899333 11215.159216202488 10786.72665347438 9587.745345711022 9928.62432073945 10653.021157733869 10606.350337951753 11434.656919651183 9927.119491686648 9735.072865588672 9528.95103259896 1.138044161188391 1.176956327914262 1.1319951814814153 1.0061700719114754 1.0419430519448771 1.1179636794532175 1.11306588749034 1.1999911512329866 1.0417851301497443 1.0216311147244392 1.0 13.218101692568517 -14.999999999998261 0.08367750848628369 0.6044683402841767 1.2098589159659892 0.27234410563876266 0.0572119454605628 120.09403466861917 0.7395449346739406 8.402977950276636 0.7838773066662306 1.0000000000040043e-15 14.999999999998261 0.6053905756818124 FQEQECPPS(ph)PEPTRK ddPTM_A549_PD325901_60min_R1 1 FQEQECPPSPEPTRK 15 1 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 FQEQECPPS(0.981)PEPT(0.019)RK 52.541000000000004 0.0081274 75551000.0 9957.5 12089.0 14311.0 11291.0 12886.0 11289.0 12863.0 13066.0 9500.2 12187.0 13752.0 True False 10968.378069675939 13107.782456349187 15282.230519033976 11988.41942627847 11980.931814286676 11197.066126856025 13352.508503903677 12805.388379921287 9100.939631835425 11417.510740153562 12060.591181110532 0.9094395046616592 1.08682752441512 1.2671211791814334 0.994015902392488 0.9933950694764764 0.9284011006353509 1.1071189051508987 1.0617546177982773 0.7546014532098099 0.9466791941373345 1.0 13.558013005954336 -8.730944243093338 24.997268104239463 0.8841173325602874 1.0473700920070794 0.25670426241698097 0.107314272810353 200.60270010682737 164436.60508242578 0.021148603217100014 0.023978892216500135 1.8580429846692273e-09 8.730944243093338 0.16325275944679207 FQESEERPK ddPTM_A549_PD325901_60min_R1 1 FQESEERPK 9 1 P34932 P34932 HSPA4 Heat shock 70 kDa protein 4 0 61.353 0.0077535 3675900.0 2875.8 2383.2 2813.4 2963.6 3383.0 3112.8 2760.4 3202.6 3043.1 3321.4 3542.6 False True 3167.749098947933 2584.040627841128 3004.334242348556 3146.654841176058 3145.389750716423 3087.450388845552 2865.4485325488404 3138.7216306089017 2915.209089665309 3111.686237166329 3106.882658391661 1.019590839838084 0.8317149091104739 0.9669931480140961 1.0128013147445312 1.0123941250953763 0.9937454124655714 0.9222905553929727 1.0102478837207591 0.9383067885719328 1.0015461088501987 1.0 11.601252039043224 -6.773292980088583 0.0038881456749769346 1.921868677244156 1.6426108757041426e-08 0.03315066403901412 0.05339537320574654 60612.93201600992 60.70227737982462 14755.579260610433 15250.19712571436 1.6854156408694352e-07 6.773292980088583 -1.9218686608180473 FQETEFLS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 FQETEFLSPPR 11 0 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 FQETEFLS(1)PPR;FQETEFLS(1)PPR 204.48 2.1869e-24 63154000.0 8975.7 10194.900000000001 9506.5 8522.7 12177.1 9569.400000000001 9935.0 10139.4 14377.1 13430.2 14859.2 True False 10490.578725203808 10713.776864061354 10854.664648169179 10610.761882598543 10385.864720906824 10582.027556346375 11740.060899277009 11576.691000610199 11120.709805510993 10396.30849232101 11169.250546942849 0.9392374789260323 0.959220747984191 0.9718346457131114 0.949997659914866 0.9298622747566132 0.94742503195461 1.0511055195632975 1.036478763902281 0.9956540735452352 0.9307973215057476 1.0 13.447244764253105 -7.724205967581732 24.999589931848522 1.0050228468526448 0.9501658152931746 0.4391963215613165 0.029888056098305617 87.64700881486255 58848.554244497784 0.0033381305182234268 0.004951188167491674 1.8870961666057712e-08 7.724205967581732 -0.05485703155947019 FQETEFLS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 FQETEFLSPPR 11 0 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 FQETEFLS(1)PPR;FQETEFLS(1)PPR 236.08 7.852900000000001e-50 111496000.0 26333.0 27170.0 26452.0 25811.0 32022.0 29325.0 27952.0 30157.0 30152.0 30044.0 31121.0 True False 29006.30677466998 29459.711253123303 28247.191788797914 27405.28684896589 29772.88518990282 29086.18692267275 29015.72865592131 29555.494977291153 28884.81629640446 28147.01671265888 27293.31429227317 1.062762347732967 1.0793746386990988 1.0349491265996518 1.0041025635616712 1.0908490215250854 1.065689077229699 1.063107556129076 1.0828840594730709 1.0583110569529421 1.0312788110393538 1.0 14.736259974700145 -10.471895277783487 0.8265027689546028 1.0003374044569753 1.0599442285191099 0.3063369418975108 0.024342884104990956 0.42765210188950403 0.5314732140250487 0.01512084858424932 0.0045042423262584945 3.3736864916616166e-11 10.471895277783487 0.05960682406213458 FQFDGDKK ddPTM_A549_MK2206_60min_R1 2 FQFDGDKK 8 1 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 66.27 0.0086461 29110000.0 11295.3 13159.8 12932.599999999999 11953.1 16045.0 12011.0 12629.3 12327.1 18048.0 16915.9 17195.1 False True 13201.670496428627 13829.577609949534 14766.63714604878 14881.610036595053 13684.80175468298 13281.996047743467 14923.880333692916 14074.50417516046 13960.156816733721 13094.586441397223 12925.082109382533 1.0213993524145828 1.069979864956557 1.142479175070728 1.1513745066108512 1.0587787094016954 1.0276140557824267 1.154644915010592 1.088929575537748 1.0800826407593813 1.0131143717757618 1.0 13.657885825151379 -10.354438596646517 0.6655975685565957 0.9971808077929697 1.0916891735055314 0.3400062535353451 0.04367100359004983 0.6787368748569195 0.5330256708179252 0.03402331228497022 0.009439783725575163 4.4214162528980806e-11 10.354438596646517 0.09450836571256171 FQFDGDKK ddPTM_A549_PD325901_60min_R1 2 FQFDGDKK 8 1 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 87.913 0.0027262 56822000.0 23231.0 22807.0 25066.0 25504.0 29867.0 29512.0 26853.0 28823.0 30313.0 26729.0 30135.0 False True 25589.3940182417 24729.02593117347 26767.129494102843 27079.324156213468 27769.244955556434 29271.66405667243 27874.905609525442 28248.102653793907 29039.050026297038 25041.32637840031 26428.586041504204 0.968246805866019 0.935692355706745 1.0128097451777018 1.0246225096449475 1.0507276065373614 1.107575865417218 1.0547255750175168 1.0688465364523203 1.0987742583236684 0.9475091228518505 1.0 14.689811620818086 -6.0731857812571794 1.7089741339991067 1.0543594667478635 0.9499504679886975 0.3807077729115943 0.04355920231185129 0.25326192996108576 1.3736015901607315 0.005843100945375078 0.025622547122145452 8.449173315112821e-07 6.0731857812571794 -0.10440899875916598 FQKS(ph)PPDLK ddPTM_A549_MK2206_60min_R1 2 FQKSPPDLK 9 1 E5RFM9;R4GMT7;O75410-7;H0YAY0;E7EVI4;E7ET87;O75410-3;E5RJU4;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 FQKS(1)PPDLK;FQKS(1)PPDLK 52.928000000000004 0.006392 8354400.0 3936.7 5130.700000000001 4336.4 4867.5 5915.4 3812.2 4195.6 3973.7999999999997 6369.5 5081.4 6968.0 True False 4601.1187169256755 5391.8307150084465 4951.366725958116 6060.037718510377 5045.252496082998 4215.604473666445 4957.88621127394 4537.098319252105 4926.818420001407 3933.508210814431 5237.653292983322 0.8784695090623148 1.0294363550622319 0.9453406800696922 1.157013910529124 0.9632658394632428 0.8048651252487301 0.9465854141044091 0.8662464018628873 0.9406537898569329 0.7510058399787548 1.0 12.35470484815961 -5.221674476227488 21.089808616677825 0.9648960352869124 0.8784676969101062 0.0 0.10647480150821716 5261.886741149895 2790269.8896960113 0.011509035632076349 3.0687668743680403 6.0024081589837556e-06 5.221674476227488 -0.08642833837680619 FQLGGS(ph)AR ddPTM_A549_MK2206_60min_R1 2 FQLGGSAR 8 0 Q9H3H3-1;Q9H3H3;Q9H3H3-3 Q9H3H3-1 C11orf68 UPF0696 protein C11orf68 1 FQLGGS(1)AR;FQLGGS(1)AR 68.657 0.0074351 3685400.0 1345.08 1422.1399999999999 1304.8600000000001 1643.62 1917.12 1272.97 1106.8400000000001 1319.77 1701.4299999999998 1913.83 2182.7 True False 1572.096619951328 1494.5208515489328 1489.9087690327713 2046.3069737849048 1635.114187593508 1407.6748404709022 1307.9385008309769 1506.851439126114 1316.0588216254016 1481.494473787338 1640.6753505445897 0.9582009136844176 0.9109180869041862 0.9081069990709774 1.2472345446682511 0.9966104427976956 0.8579849998987626 0.7971951918439151 0.9184336429665653 0.802144568813423 0.9029784431731636 1.0 10.680074077751506 -7.2135060631331465 8.196913040377362 0.8932496371085089 1.007456714541235 0.27180617632193094 0.10004830080676472 0.4600023742359509 73.22903046046122 0.016888425437814842 0.02924171851223202 6.116372639006111e-08 7.2135060631331465 0.11420707743272607 FQPPQVPDQAPAEAPT(ph)EKTEVSPVPR ddPTM_A549_MK2206_60min_R1 1 FQPPQVPDQAPAEAPTEKTEVSPVPR 26 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 FQPPQVPDQAPAEAPT(0.387)EKT(0.33)EVS(0.283)PVPR 52.268 0.0028521 7547500.0 906.06 1151.3 1128.2 815.76 1478.3 1025.7 960.34 925.73 1970.5 1660.2 1691.3 True False 1058.9807769598087 1209.896252400106 1288.1957246162597 1015.6212366208582 1260.8440282921688 1134.2388931954442 1134.8213471576921 1056.955062429224 1524.1848962418987 1285.1596669410249 1271.3035324946457 0.8329881494797694 0.9516973889201411 1.0132873005461307 0.7988817860262932 0.9917726145368664 0.8921857480957022 0.8926439030109999 0.8313947341554134 1.1989150169755531 1.0108991551523416 1.0 10.31209280953227 -8.755641720815525 24.999985779672837 1.09393209270894 0.9051674511610633 0.46297627481772163 0.0799823033531287 87.71885418987227 378250.78189050057 0.015348619201516703 0.017174503118721037 1.7553279946598404e-09 8.755641720815525 -0.18876464154787664 FQPPQVPDQAPAEAPTEKTEVS(ph)PVPR ddPTM_A549_MK2206_60min_R1 1 FQPPQVPDQAPAEAPTEKTEVSPVPR 26 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 FQPPQVPDQAPAEAPT(0.002)EKT(0.046)EVS(0.952)PVPR 107.91 8.3131e-13 6373400.0 769.93 766.43 1289.7 918.14 1277.4 742.47 742.26 486.29 1515.6 1247.3 1718.2 True False 899.8753610187692 805.4380133127876 1472.598853073558 1143.0843412168704 1089.4961521615473 821.0376825883023 877.1190340309355 555.2230967006658 1172.3190199158698 965.5340637125279 1291.5235200924142 0.6967549154307149 0.6236340266224148 1.1402028922928071 0.8850666081056562 0.8435743795696334 0.6357125285101688 0.6791351612150074 0.4298977820093723 0.9077024163152563 0.7475930934989397 1.0 10.33485820145266 -8.980026107881656 24.52279530479188 0.9592807763950796 0.7483394058007695 0.07746504668050525 0.18212938718407992 119.71565341239351 146982.3103121213 0.03173830768057677 0.032371046122188975 1.047065601162009e-09 8.980026107881656 -0.21094137059431006 FQPPQVPDQAPAEAPTEKTEVS(ph)PVPR ddPTM_A549_PD325901_60min_R1 2 FQPPQVPDQAPAEAPTEKTEVSPVPR 26 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 FQPPQVPDQAPAEAPT(0.118)EKT(0.118)EVS(0.764)PVPR;FQPPQVPDQAPAEAPT(0.185)EKT(0.185)EVS(0.629)PVPR 112.36 1.891e-13 43761000.0 2947.7 2749.6 2957.4 3386.5 3693.7 3180.7 2971.2 3573.8 3498.1 3305.2 3468.9 True False 3246.9483340179513 2981.318441722038 3158.1069482909006 3595.6764137004734 3434.2672545732325 3154.7974337577243 3084.2706419030246 3502.517755408136 3351.087021970431 3096.50910793104 3042.247291168869 1.0672861287257267 0.979972420511739 1.0380835763937903 1.181914574840157 1.1288586777749237 1.0369957244815597 1.0138132593152904 1.1512929161200518 1.1015169712528208 1.0178360966643585 1.0 11.570921712952181 -10.84289384391058 1.1221251824249 1.0005552540938103 1.0787854870201938 0.17249877340009045 0.05775415412901697 0.6786297110790178 1.5342292869882108 0.040588753647800235 0.01024522227242445 1.4358403578452745e-11 10.84289384391058 0.07823023292638354 FQPSSVLS(ph)PYER ddPTM_A549_PD325901_60min_R1 2 FQPSSVLSPYER 12 0 J3QLM6;Q7Z6J9 J3QLM6 TSEN54 tRNA-splicing endonuclease subunit Sen54 1 FQPSS(0.001)VLS(0.998)PYER;FQPSSVLS(1)PYER 130.07 7.5169e-08 7937100.0 3280.2 3628.7999999999997 4125.2 3320.0 4039.8 3968.5 3516.9 3553.8999999999996 3898.0 4241.2 4640.6 True False 3613.2034892443894 3934.611711274707 4405.160878842777 3525.0688597329317 3756.0583845534125 3936.1818517519805 3650.7375540215235 3483.014676519384 3734.1806156601397 3973.4099081922814 4069.835619187139 0.8878008419332789 0.9667741106606561 1.0823928264018219 0.8661452671734657 0.9229017424796148 0.9671599101435323 0.8970233433532824 0.8558121266860995 0.9175261521756402 0.9763072222032111 1.0 11.990754809823697 -10.72532139428469 1.0959363429272748 0.9981906190945277 0.9307235997053086 0.12290395232112472 0.059607172128917314 0.7423856929477439 1.646557058296237 0.03594814394482407 0.01035837411998541 1.8822556338393612e-11 10.72532139428469 -0.06746701938921906 FQS(ph)LGVAFYR ddPTM_A549_MK2206_60min_R1 1 FQSLGVAFYR 10 0 C9IZZ0;C9J592;C9J8S3;P51149 C9IZZ0 RAB7A Ras-related protein Rab-7a 1 FQS(1)LGVAFYR 139.48 1.7858e-07 15626000.0 4557.7 4548.3 4692.8 4445.7 6839.9 5692.5 5417.6 5617.1 7522.8 7546.3 6958.6 True False 5326.928334933361 4779.789042639972 5358.309605104751 5534.896699575054 5833.759770760744 6294.876571624316 6401.907793449735 6413.341126647293 5818.897811443066 5841.585588867037 5230.587572410124 1.0184187266133171 0.9138149350279522 1.0244182954451093 1.0581787653781145 1.1153163368360723 1.2034740809671205 1.2239366428387501 1.226122503038829 1.1124749812308108 1.1168125010810936 1.0 12.352757303828074 -6.188566241788069 2.364992059482176 1.095263326508949 0.9670195371469744 0.38003113273027034 0.07535121885544935 0.35316677169092714 3.8095254038680673 0.01379083856648648 0.04438773763872541 6.477892821481312e-07 6.188566241788069 -0.12824378936197467 FQS(ph)LGVAFYR ddPTM_A549_PD325901_60min_R1 2 FQSLGVAFYR 10 0 C9IZZ0;C9J592;C9J8S3;P51149 C9IZZ0 RAB7A Ras-related protein Rab-7a 1 FQS(0.999)LGVAFY(0.001)R;FQS(1)LGVAFYR 148.96 3.1236e-08 54265000.0 18343.4 21333.0 19617.0 19563.3 23835.3 25812.9 18997.2 20622.4 24566.4 26824.0 20031.9 True False 20205.608464302637 23130.80677817 20948.327586603977 20771.680609522067 22161.190755321062 25602.688300639726 19720.14884166672 20211.070054040167 23533.959639957255 25130.32806218751 17568.10329267656 1.1501303315267704 1.3166365425351474 1.192406900028673 1.1823519171919346 1.2614446981626741 1.4573393538340855 1.1224973187565026 1.1504412125391679 1.3395845440963239 1.430451975579136 1.0 14.100670821438836 -10.929949160115584 1.1073200424810332 0.9956546911326484 1.2496534654115319 0.0 0.1583004012025765 0.363441195084873 0.7689773766643695 0.07321620098503956 0.016045223169257456 1.1750351002105565e-11 10.929949160115584 0.2539987742788835 FQS(ph)MPVR ddPTM_A549_MK2206_60min_R1 1 FQSMPVR 7 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 FQS(1)MPVR 54.538999999999994 0.042219 3062700.0 460.79 363.23 523.9 453.71 719.39 473.46 509.43 406.91 691.85 711.39 836.81 True False 538.56008676612 381.71685551923053 598.1968978252595 564.8689703678156 613.5686839701706 523.5612229426874 601.9868368312713 464.59073860961183 535.147079657426 550.6865049181874 629.0069822189108 0.8562068498290326 0.6068563089278763 0.9510178976313357 0.8980329095476184 0.9754560780958592 0.8323615440575102 0.9570431709798798 0.7386098274628089 0.8507808256271167 0.875485520010546 1.0 9.296932221436823 -14.999999999499348 0.22957513423427756 1.8378473897249976 0.8339493063418518 0.01644103067241709 0.10838876992170007 49.659084528772716 0.6211048642018083 18.772658747279795 0.06239496277224399 1.0000000011527937e-15 14.999999999499348 -1.0038980833831457 FQS(ph)MPVR ddPTM_A549_PD325901_60min_R1 2 FQSMPVR 7 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 FQS(1)MPVR;FQS(1)MPVR 74.173 0.018705 8841400.0 2319.9 3080.8 2989.4 2948.3999999999996 2951.0 3107.8 3654.1000000000004 2899.8 3491.0 3464.0 3519.1000000000004 True False 2555.4145401798855 3340.42982806854 3192.2786607225316 3130.5159716977646 2743.7319403973274 3082.491107187805 3793.1587751002426 2841.961214150908 3344.2854102795154 3245.2824488300607 3086.273009412888 0.8279936779364865 1.0823507246055335 1.0343474640727943 1.014335401356244 0.8890114166922896 0.9987746054177488 1.2290418778673855 0.9208392146395188 1.083599992638276 1.0515215079586955 1.0 11.591649971944967 -7.537163193081578 24.999986359916974 1.0457195295029618 0.9781467459255639 0.15646276314836427 0.09466625763902603 412.72815035225386 722335.535486705 0.013863966224674314 0.02056814196184606 2.9029316266111758e-08 7.537163193081578 -0.06757278357739782 FQSPQIQATIS(ph)PPLQPK ddPTM_A549_MK2206_60min_R1 4 FQSPQIQATISPPLQPK 17 0 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 1 FQSPQIQATIS(1)PPLQPK;FQSPQIQAT(0.014)IS(0.986)PPLQPK;FQSPQIQAT(0.135)IS(0.865)PPLQPK;FQSPQIQAT(0.014)IS(0.986)PPLQPK 200.69 2.9386e-48 63261000.0 4036.59 5651.5599999999995 5369.32 5146.35 7615.599999999999 5231.12 5257.09 5680.85 8426.1 7479.6 7450.7 True False 4717.867706849653 5939.200264235505 6130.7703138597535 6407.205981028427 6495.3553283243145 5784.673646263576 6212.235204124824 6486.12788437348 6517.601803716755 5789.953165192199 5600.485561141046 0.8424033336653103 1.0604795243906404 1.0946854959145127 1.1440447281008648 1.1597843182370329 1.0328878778655406 1.1092315364989782 1.1581367032489935 1.163756558706109 1.0338305673646895 1.0 12.451336198668404 -5.254261418047087 3.1498380815719593 1.0939596076345657 0.8024680927474602 0.6480705766330943 0.05414972375828312 0.219817061233714 3.2849089667806872 0.0094075298952576 0.1588499894853609 5.568504589694781e-06 5.254261418047087 -0.29149151488710545 FQSPQIQATIS(ph)PPLQPK ddPTM_A549_PD325901_60min_R1 4 FQSPQIQATISPPLQPK 17 0 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 1 FQSPQIQAT(0.005)IS(0.995)PPLQPK;FQSPQIQAT(0.006)IS(0.994)PPLQPK;FQSPQIQAT(0.01)IS(0.99)PPLQPK;FQSPQIQAT(0.001)IS(0.999)PPLQPK 212.55 4.9382e-55 109085000.0 10060.1 9605.9 10270.7 10322.3 12571.2 11098.2 9930.4 12022.3 11346.6 11949.3 12393.000000000002 True False 11081.393946145812 10415.422904908975 10967.731464736384 10959.88502735579 11688.242280285624 11007.819938796489 10308.306806123386 11782.505795188097 10869.741860864378 11194.819158719707 10868.739565699741 1.0195656892099227 0.95829169904656 1.009107946550587 1.0083860194740235 1.0753999771208174 1.0127963663363198 0.9484362693402826 1.0840728792851084 1.000092218160034 1.0300016014781537 1.0 13.407897022053552 -5.9103139345401425 24.225964899618152 1.0090938723936704 0.9876206543833405 0.03667295254521241 0.0383683870735957 39.14875692405774 10563.256726617803 0.0049521618439215325 0.015397445889150348 1.2293797788554206e-06 5.9103139345401425 -0.021473218010329975 FQSQADQDQQASGLQS(ph)PPSR ddPTM_A549_PD325901_60min_R1 1 FQSQADQDQQASGLQSPPSR 20 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 FQSQADQDQQASGLQS(1)PPSR 166.28 1.0711e-27 5542900.0 846.66 1001.8 969.26 1143.2 1303.6 1036.9 932.28 805.25 1005.0 845.58 906.2 True False 932.6122999218504 1086.2252018174056 1035.0398122338672 1213.8128676044244 1212.0396331758573 1028.4558301830996 967.7584255631906 789.1886570435953 962.763344981643 792.1899344924149 794.7431448750984 1.1734763689826093 1.3667625934516445 1.3023576471320601 1.527302091791162 1.525070887357375 1.2940732321066215 1.217699620064396 0.9930109647785939 1.211414469177901 0.9967873766522581 1.0 9.6343448571023 -7.835148917140749 2.5232239547092505 1.0949118860946079 1.3820782797772104 0.6215346050201968 0.11284213561544318 0.1636477265736787 2.131893605799704 0.019681545183192626 0.02866963222407445 1.4616758880578367e-08 7.835148917140749 0.28716639368260255 FQTGNKS(ph)PEVLR ddPTM_A549_PD325901_60min_R1 2 FQTGNKSPEVLR 12 1 Q96S66-4;Q96S66-3;Q96S66-2;Q96S66 Q96S66-4 CLCC1 Chloride channel CLIC-like protein 1 1 FQT(0.002)GNKS(0.998)PEVLR;FQT(0.003)GNKS(0.997)PEVLR 126.77 2.4287e-07 91893000.0 17937.7 18135.3 18229.5 19225.0 22188.4 24602.0 19559.9 20566.4 23858.0 22054.1 24058.0 True False 19758.722098963182 19663.625376840893 19466.663492888692 20412.484586857125 20629.963329824503 24401.649468767104 20304.262698087983 20156.187017971326 22855.331228429888 20661.600362223744 21099.018516227243 0.9364758879076182 0.9319687245981424 0.9226336039241301 0.9674613333865694 0.9777688622794473 1.1565300750838154 0.9623320953281304 0.9553139641291473 1.0832414413424902 0.979268317449597 1.0 14.364888268780229 -6.863612380147408 3.0782472631760402 1.034865643254125 0.935912411602343 0.3022708696172307 0.05632281049858596 0.20175489822455528 3.8338331672548285 0.00828727823018224 0.01682177026418849 1.3689501063834133e-07 6.863612380147408 -0.09895323165178205 FRDLS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 FRDLSPPR 8 1 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 FRDLS(1)PPR 49.35 0.009359399999999999 2422000.0 226.62 230.08 180.79 181.9 305.18 291.8 146.63 282.41 345.47 308.85 231.71 True False 264.86791567294887 241.7900892488632 206.4287405188561 226.46550816580128 260.2884262695015 322.6780823188366 173.27077299053718 322.44248234435224 267.2215966022274 239.08057049435934 174.17001212932914 1.5207435105204703 1.3882417891165046 1.1852140216053577 1.3002554538357634 1.4944502965081354 1.8526615367014698 0.9948370036391556 1.8513088355584661 1.534257208432662 1.3726850424562822 1.0 7.4443524378415695 -10.72972964970429 1.0144308526063759 1.0032735278924971 1.4552557811380062 0.07951842324227598 0.2636082712696157 0.483145454091335 0.8936424171859678 0.15332346606771047 0.04080477844349832 1.863246655263393e-11 10.72972964970429 0.4519822532455091 FRDLS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 FRDLSPPR 8 1 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 FRDLS(1)PPR;FRDLS(1)PPR 55.31399999999999 0.0058904 6505400.0 570.0799999999999 848.67 592.6500000000001 769.15 689.52 711.0999999999999 679.91 619.86 713.81 738.22 750.13 True False 627.9541019292847 920.1903993076244 632.870792893962 816.65864863361 641.0904939148646 705.3090373644536 705.7843471110277 607.4964060292374 683.8110480411401 691.6086632145871 657.8687654658551 0.9545279163460709 1.3987446244784278 0.9620015816464681 1.241370150861793 0.9744960204348518 1.072112060017023 1.0728345593535549 0.9234309909804768 1.0394338262235547 1.0512866691958538 1.0 9.361656007329957 -6.7769234119817945 24.997443267478957 1.017438600376938 1.1450485227089833 0.1839494017569917 0.12139974314285883 253.7192742967457 409604.66090926185 0.015132709839089568 0.028670473155908784 1.6713853378440227e-07 6.7769234119817945 0.12760992233204527 FRDLS(ph)PPRYDSLVQSQAR ddPTM_A549_MK2206_60min_R1 1 FRDLSPPRYDSLVQSQAR 18 2 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 FRDLS(0.989)PPRY(0.008)DS(0.003)LVQSQAR 45.784 0.006626000000000001 8287700.0 344.96 346.99 533.93 207.87 521.48 523.97 410.77 332.16 594.46 346.52 439.05 True False 403.18081453772993 364.65030888587904 609.6493026452396 258.79815933163894 444.77098280037876 579.4161576168635 485.4015919069966 379.2446971973375 459.8157591575538 268.24089133140814 330.02176783644177 1.221679458239693 1.1049280514932551 1.8473002754999506 0.7841851191461373 1.3477019583169025 1.7556907273583882 1.4708168951678389 1.1491505535637592 1.393289182625789 0.8127975711721775 1.0 8.36641737580329 -10.769026713023516 0.7943701958177931 0.9766212444253679 1.3480543315370157 0.24068092439082445 0.28688026358756913 1.0727577220837448 1.0743239794789103 0.25648656418294963 0.05068629893257817 1.7020538135305558e-11 10.769026713023516 0.3714330871116478 FRDLS(ph)PPRYDSLVQSQAR ddPTM_A549_PD325901_60min_R1 3 FRDLSPPRYDSLVQSQAR 18 2 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 FRDLS(0.955)PPRY(0.033)DS(0.011)LVQS(0.001)QAR;FRDLS(0.999)PPRY(0.001)DSLVQS(0.001)QAR;FRDLS(0.975)PPRY(0.023)DS(0.002)LVQSQAR 45.784 0.006626000000000001 30255600.0 3070.6400000000003 3025.79 3248.21 3656.9700000000003 3836.56 3625.54 3583.16 3763.65 3627.4 3567.6400000000003 3983.8500000000004 True False 3382.369112314306 3280.783942310929 3468.653063673493 3882.8527313185364 3567.0932610134796 3596.014804283955 3719.5191145803856 3688.5810482236934 3474.9529926232926 3342.3786015427504 3493.861705705873 0.9680890078707217 0.9390136813237444 0.9927848769768959 1.1113355531437883 1.0209600612376875 1.0292378769346406 1.0645868176482167 1.0557318402728482 0.9945880190244221 0.9566430737897457 1.0 11.770606789184388 -5.98656735145476 12.411586839849111 1.017632531466155 0.9566014913684892 0.3251675963927597 0.039983245580872226 0.6776570466520673 615.8661421340317 0.005561472969332086 0.01709797132690796 1.0314131129574123e-06 5.98656735145476 -0.0610310400976658 FRDQDLASCDRDRSS(ph)R ddPTM_A549_MK2206_60min_R1 2 FRDQDLASCDRDRSSR 16 3 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 FRDQDLAS(0.001)CDRDRS(0.149)S(0.85)R;FRDQDLAS(0.01)CDRDRS(0.477)S(0.512)R 57.989 0.0022737 14735700.0 1589.9499999999998 1521.31 1285.34 1443.1599999999999 2241.3 2084.3900000000003 1569.99 1606.48 2379.2 2587.6 2568.1 True False 1858.2946894546135 1598.7381809596145 1467.6205395127295 1796.7342647859139 1911.6077390321561 2304.958766293898 1855.2368607202723 1834.2034596386648 1840.3149988016871 2003.0593628337513 1930.3698940457045 0.9626624903271598 0.8282030225870078 0.7602794386918579 0.9307720092030058 0.9902805389415671 1.1940503078729243 0.9610784267009226 0.9501823797067761 0.9533483735310031 1.0376557202908416 1.0 10.914661605302665 -6.511807501376717 4.970069734360417 0.9907215468361661 0.8468641404180426 0.4330435948144534 0.07916139885353124 0.14376567534255685 10.061590301110437 0.011210027060658103 0.025296611734972375 3.0774605798318076e-07 6.511807501376717 -0.1438574064181235 FRELAEEAAR ddPTM_A549_PD325901_60min_R1 1 FRELAEEAAR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 45.82899999999999 0.042286000000000004 1762800.0 556.04 487.4 565.47 493.37 615.45 666.58 663.5 787.68 785.6 629.97 517.89 False True 612.4887714649868 528.4749085304486 603.8461946473442 523.8443443754325 572.222915187237 661.1515934838947 688.7498555811311 771.969104476994 752.5839639975903 590.1935866886473 454.19281317519847 1.348521495052208 1.1635474917270363 1.3294930635866733 1.1533523410758304 1.2598678327534658 1.4556628249176298 1.5164261423825207 1.6996506375348959 1.6569702165394935 1.2994340059295224 1.0 8.827161067817475 -5.976053749867869 20.959791397441922 1.3533586132159758 1.2536553409817626 0.04218307885126893 0.20063253657925834 155.90014663601096 136443.17895905988 0.03818246455318972 0.11868589072490597 1.0566867217206753e-06 5.976053749867869 -0.09970327223421327 FRENPDQVEPEDGS(ph)DVSPGPNSEDSIEEVKEDR ddPTM_A549_PD325901_60min_R1 2 FRENPDQVEPEDGSDVSPGPNSEDSIEEVKEDR 33 2 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 FRENPDQVEPEDGS(0.998)DVS(0.002)PGPNSEDSIEEVKEDR;FRENPDQVEPEDGS(0.998)DVS(0.002)PGPNSEDSIEEVKEDR 131.4 3.3380999999999995e-30 23482000.0 2761.0 2674.6 2848.0 2804.8 3474.2 3173.9 3435.4 3178.0 2982.3 2578.6000000000004 3522.6 True False 3041.2946874592253 2899.9979285095155 3041.2824064152605 2978.046125837025 3230.1841773393403 3148.0528107031923 3566.136026923014 3114.6122969072308 2856.964302227613 2415.7867559333713 3089.342531601218 0.9844472266669991 0.9387103886490811 0.9844432513732791 0.9639740803663789 1.0455895208438164 1.0190041338897906 1.1543349403455991 1.0081796579846765 0.9247806848879389 0.7819743946234605 1.0 11.593084123658029 -3.6619179736964753 15.275112009066001 0.9861226162028586 0.45138779809310414 0.0 0.08622139625237898 0.0 0.0 0.00876162381710919 0.0 0.00021781211207823567 3.6619179736964753 -0.5347348181097544 FRFS(ph)GR ddPTM_A549_PD325901_60min_R1 2 FRFSGR 6 1 Q9H329-2;Q9H329;H7C3Q2 Q9H329-2;REV__Q9H329 EPB41L4B;HECW1 Band 4.1-like protein 4B 1 FRFS(1)GR;FRFS(1)GR 53.166000000000004 0.024376 52991000.0 2624.5 2517.51 2887.3 2612.2 3238.6000000000004 2506.3 2517.1000000000004 2870.6000000000004 2977.0 3020.3 3279.3 True False 2890.9373079452143 2729.6694029021146 3083.2495407453566 2773.5496612633638 3011.131908563465 2485.8895237611173 2612.8896179099697 2813.343631057864 2851.8870427963684 2829.597742552378 2875.9668891954443 1.005205351565768 0.9491310255194709 1.0720740744021222 0.9643885928183505 1.0469981138780888 0.8643665311656451 0.9085256258429767 0.9782253201965412 0.99162721709713 0.9838770234743425 1.0 11.489831350888355 -4.09299688178452 13.979808625074194 0.9852907731141941 0.9817927511484582 0.0 0.055844058466433075 0.0 0.0 0.007061918332879684 0.0 8.072408261820318e-05 4.09299688178452 -0.003498021965735898 FRGS(ph)QEDLEAR ddPTM_A549_MK2206_60min_R1 2 FRGSQEDLEAR 11 1 Q9NRR6-2;Q9NRR6 Q9NRR6-2 INPP5E 72 kDa inositol polyphosphate 5-phosphatase 1 FRGS(1)QEDLEAR;FRGS(1)QEDLEAR 112.42 1.3133e-05 7675800.0 1696.02 2255.37 1680.38 1738.8600000000001 2391.3 2109.3 1631.21 1638.71 2388.3999999999996 2838.3 2643.5 True False 1982.2667122920952 2370.1586995358525 1918.683151684691 2164.880778060393 2039.5429377359555 2332.504725959979 1927.5797422757566 1871.0021608388997 1847.4312134910679 2197.1260587150405 1987.045993111569 0.997594780978376 1.1928051528512216 0.965595742794143 1.0894970652744416 1.0264195921012276 1.1738554286342648 0.9700730375431861 0.9415998257338004 0.9297375198639088 1.1057248127782393 1.0 10.956409550941688 -7.909855494595179 13.363724114354815 0.9636137189549975 1.0732420400737337 0.1953369315543828 0.07824034898694211 0.5289067467457708 76.20446569556236 0.009619497588662741 0.013292373681785834 1.2306781936221053e-08 7.909855494595179 0.10962832111873622 FRIDELEPR ddPTM_A549_MK2206_60min_R1 2 FRIDELEPR 9 1 Q14697;Q14697-2;F5H6X6 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 77.67699999999999 0.0019140000000000001 2510500.0 410.29999999999995 553.0600000000001 316.78 421.40999999999997 424.17 481.64 330.40999999999997 276.12 695.16 660.69 574.58 False True 479.54860912810335 581.2083916897442 361.7041673851608 524.6554689178138 361.77515489460137 532.6068251132434 390.44122010368557 315.2608555820354 537.7073699424097 511.43967013086683 431.8959283987309 1.110333711424524 1.3457139868037062 0.837479919586627 1.214772898792985 0.8376442821211473 1.2331832510852825 0.9040169041446162 0.7299463478409624 1.2449929128435602 1.1841734003537543 1.0 8.754539905702277 -5.736026106001304 24.999849411299934 1.0600093794167826 1.2280237038746424 0.13322788317870649 0.18268718162626477 387.4203427602403 381111.638164871 0.024650782037091232 0.09539950755137648 1.8364279499784e-06 5.736026106001304 0.1680143244578598 FRKS(ph)DTNEWNK ddPTM_A549_MK2206_60min_R1 2 FRKSDTNEWNK 11 2 Q9P0K7;Q9P0K7-4;D6RB25;D6RBW6;D6RB27;D6R9G4;D6RBY4;D6REL2;D6R9G6;D6RF74;D6RE17 Q9P0K7 RAI14 Ankycorbin 1 FRKS(0.971)DT(0.029)NEWNK;FRKS(0.837)DT(0.163)NEWNK 55.213 0.0057339 7291500.0 6203.5 6094.0 5015.6 4454.8 7520.1 6210.8 5775.6 5958.0 8047.0 8335.3 8370.1 True False 7250.499138986575 6404.158570421472 5726.887499011974 5546.22619998357 6413.903251816234 6868.022733604623 6824.95175942267 6802.564745609753 6224.367348418451 6452.349940882735 6291.573166991917 1.1524143400295437 1.0178946346869528 0.9102473017491861 0.8815324963685185 1.0194434812371107 1.0916224847605664 1.0847766652749218 1.0812184115252288 0.9893181217495722 1.0255543040863477 1.0 12.619205083395377 -5.274096828216538 4.904877180563669 1.0018178017337687 1.1589757496799336 0.2836824908410662 0.06410076093846681 0.15696832455312593 11.016867722081313 0.00925710629488113 0.0815898810334399 5.31989636183489e-06 5.274096828216538 0.1571579479461649 FRKS(ph)DTNEWNK ddPTM_A549_PD325901_60min_R1 2 FRKSDTNEWNK 11 2 Q9P0K7;Q9P0K7-4;D6RB25;D6RBW6;D6RB27;D6R9G4;D6RBY4;D6REL2;D6R9G6;D6RF74;D6RE17 Q9P0K7 RAI14 Ankycorbin 1 FRKS(0.868)DT(0.132)NEWNK;FRKS(0.997)DT(0.003)NEWNK 82.102 0.00017836 13073300.0 8661.8 7200.4 8483.400000000001 8192.6 8396.4 8258.5 8538.7 7289.799999999999 9724.7 9284.4 9732.7 True False 9541.139559519863 7807.202977805992 9059.134538828372 8698.638295255432 7806.665830007496 8191.245514096947 8863.64490105593 7144.39922026253 9316.0046775552 8698.181399514386 8535.63960066859 1.1178001890769278 0.9146593978961413 1.061330487538248 1.0190962484608739 0.9145964678963256 0.9596522226003231 1.0384277354401945 0.8370080690500236 1.0914243235885317 1.0190427204580035 1.0 13.059283547363222 FRLT(ph)PPSPVR ddPTM_A549_PD325901_60min_R1 2 FRLTPPSPVR 10 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 FRLT(0.999)PPS(0.001)PVR;FRLT(1)PPSPVR 63.091 0.0026574000000000003 4513800.0 865.66 731.7800000000001 823.5 921.53 1016.34 785.93 815.2199999999999 990.8 1120.92 874.06 997.4000000000001 True False 953.5411659347893 793.4496687821334 879.387662107783 978.4508151535208 944.9557845826567 779.5296466542611 846.2436432055005 971.0377167324361 1073.811630504301 818.871702431987 874.7261230395316 1.0901025370334068 0.9070835406458702 1.0053291412540113 1.118579620960173 1.0802876005338544 0.8911699629428259 0.9674384026224585 1.1101048558584685 1.2275975327831523 0.9361463901255636 1.0 9.772687569254026 -8.27682289078756 23.072904875709494 1.1106767653604224 1.0070162442312187 0.018374021400381024 0.09819996438228937 384.35208830137884 576467.4277249123 0.017191059975426387 0.020832603681064182 5.28660800470346e-09 8.27682289078756 -0.10366052112920365 FRPFTFSQS(ph)TPIGLDR ddPTM_A549_MK2206_60min_R1 1 FRPFTFSQSTPIGLDR 16 1 A0A0A0MRY4;Q96N96-6;J3KQJ8;Q96N96-5;Q96N96-4;Q96N96 A0A0A0MRY4 SPATA13 Spermatogenesis-associated protein 13 1 FRPFTFS(0.009)QS(0.626)T(0.364)PIGLDR 76.678 0.00012535 5487600.0 2192.5 1790.5 1956.1 2218.7 2941.7 2261.0 2496.0 2457.8 3403.6 2581.8 3310.7 True False 2562.5403985214903 1881.628802156162 2233.5043936552606 2762.281599601229 2508.9798268464265 2500.2575192696695 2949.490891252683 2806.20067669682 2632.690034432341 1998.569586862027 2488.56181932834 1.029727442822022 0.7561109342519816 0.897508101389292 1.109991151574754 1.0082047419354836 1.0046997827622728 1.1852190563820302 1.127639528542719 1.0579162687398704 0.8031022461806631 1.0 11.281096510668645 -6.184553632318892 6.684855518341011 1.0476977979762279 0.8784745238869162 0.24400968441366544 0.1099006848047988 0.17334020696191185 12.648254533802962 0.011206916252459809 0.029960247017688943 6.538021850402843e-07 6.184553632318892 -0.1692232740893117 FRPFTFSQS(ph)TPIGLDR ddPTM_A549_PD325901_60min_R1 1 FRPFTFSQSTPIGLDR 16 1 A0A0A0MRY4;Q96N96-6;J3KQJ8;Q96N96-5;Q96N96-4;Q96N96 A0A0A0MRY4 SPATA13 Spermatogenesis-associated protein 13 1 FRPFTFSQS(0.919)T(0.081)PIGLDR 69.03 0.00038782 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FRQS(ph)LPLSR ddPTM_A549_MK2206_60min_R1 2 FRQSLPLSR 9 1 A0A087X165;Q9C0H9;A0A087WU33 A0A087X165 SRCIN1 SRC kinase signaling inhibitor 1 1 FRQS(1)LPLSR;FRQS(1)LPLSR 84.71799999999999 0.0003711 7414000.0 554.94 617.5 567.17 449.87 809.71 488.21999999999997 743.9000000000001 902.48 808.96 860.7 815.3399999999999 True False 648.6003050196196 648.9281124442499 647.6032344713735 560.0881701954315 690.6027316163509 539.8831163457929 879.0570008024317 1030.4093037290863 625.7318516436676 666.267272217889 612.8685757607666 1.0583024332981967 1.0588373072297301 1.0566755420075016 0.9138797326982908 1.1268365828009557 0.8809117283842213 1.4343319849793896 1.6812891776185745 1.0209886367023038 1.0871291147385675 1.0 9.25943392368049 FRQS(ph)LPLSR ddPTM_A549_PD325901_60min_R1 4 FRQSLPLSR 9 1 A0A087X165;Q9C0H9;A0A087WU33 A0A087X165 SRCIN1 SRC kinase signaling inhibitor 1 1 FRQS(1)LPLSR;FRQS(1)LPLSR;FRQS(1)LPLSR;FRQS(1)LPLSR 116.03 5.4981e-05 12281200.0 2339.93 2142.85 2253.17 2178.7 2446.54 2187.45 2514.7 2280.35 2342.06 2696.09 2625.42 True False 2577.4779710345774 2323.435489832729 2406.0836656118927 2313.2733508132937 2274.703470504806 2169.636132446736 2610.3982845966393 2234.866630350033 2243.631362933041 2525.8584172824017 2302.50998390861 1.1194209749567283 1.0090881282037254 1.0449829457535995 1.0046746233370993 0.9879233907352699 0.9422917371084251 1.1337185518585138 0.9706219065144944 0.9744285056798668 1.0970021563140622 1.0 11.168991696659138 -2.000000361330857 0.7528822543263447 0.9943745934187901 22.222970845891776 0.13432149047321817 0.057032968176496654 302.2909156547738 1.2055808580074916 0.00713424551798935 10898.903102089484 0.009999991680053015 2.000000361330857 21.228596252472986 FRRS(ph)ET(ph)PPHWR ddPTM_A549_MK2206_60min_R1 2 FRRSETPPHWR 11 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR 71.87899999999999 0.0011255 65034000.0 2103.63 1547.63 1229.1100000000001 1005.73 2825.5 1726.0700000000002 1493.88 2025.5099999999998 3104.8 2496.8 2971.7 True False 2458.6713151843824 1626.3977565378061 1403.4162799885573 1252.1338951489358 2409.872692917218 1908.7215817274632 1765.2986589040684 2312.632245364218 2401.5677573467888 1932.7711458970894 2233.7448752523715 1.1006947760346169 0.7281036319575456 0.6282795746000301 0.5605536733497679 1.078848672297434 0.8544939947592777 0.7902866072405079 1.0353161952315317 1.0751307295446872 0.8652604723620115 1.0 11.125248704043472 -8.265018679505019 23.049501945181753 1.0364575566234637 0.810540850459395 0.190423504355133 0.16325208507215916 94.99300019249522 611722.9896103628 0.02532370690621934 0.03125662697535815 5.4322696617353414e-09 8.265018679505019 -0.22591670616406878 FRRS(ph)ET(ph)PPHWR ddPTM_A549_PD325901_60min_R1 3 FRRSETPPHWR 11 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR 70.332 0.0015286 50032000.0 3388.58 3358.48 3219.1400000000003 2977.81 3089.2700000000004 2847.63 2018.79 2534.39 3491.73 3855.4000000000005 4595.3 True False 3732.5861470592495 3641.5108961865867 3437.6101986613844 3161.742560602808 2872.2903326029327 2824.439845408718 2095.616158174277 2483.8396032595056 3344.9847309181614 3611.969386033318 4030.1072320067783 0.9261753924102463 0.9035766758923952 0.8529823155473801 0.7845306287367518 0.7127081656268202 0.7008349115321921 0.5199901733460259 0.6163209711972567 0.8299989400660531 0.896246471395936 1.0 11.976602510766753 -9.756201693407883 1.149244633050637 0.9684939964529681 0.755389070917984 0.2689227924679424 0.11790393724499702 0.366049672712229 0.9866124703606154 0.03824937300124071 0.025188063622722922 1.7530661603749372e-10 9.756201693407883 -0.21310492553498406 FRS(ph)DVHTEAVQAALAK ddPTM_A549_PD325901_60min_R1 1 FRSDVHTEAVQAALAK 16 1 A0A494C143;Q14689-3;Q14689-2;Q14689-4;Q14689-6;Q14689 A0A494C143 DIP2A Disco-interacting protein 2 homolog A 1 FRS(0.966)DVHT(0.034)EAVQAALAK 94.057 3.0015e-06 3642900.0 542.6 634.94 818.55 804.76 878.1 927.84 573.53 757.57 876.13 1161.2 874.67 True False 597.6843525589921 688.4486221221242 874.1017253410146 854.4681974574316 816.4252852805465 920.283978664372 595.3559979976584 742.4596720478323 839.3093029241454 1087.8816338283682 767.0911349899606 0.7791569023500897 0.8974795701831888 1.1395017951191087 1.1139070163659428 1.0643132843547092 1.1997061844241184 0.7761215986487058 0.967889782819025 1.0941454862923556 1.418190856608721 1.0 9.583254178438338 -5.553540163784144 4.982667711558758 1.0432083461515842 0.8027841264373715 0.2556197403200139 0.15438017566905496 0.12616965556447404 7.814219855440145 0.014337132160808397 0.06423835438707902 2.7955021861003872e-06 5.553540163784144 -0.24042421971421268 FRS(ph)PAAPSPLALR ddPTM_A549_PD325901_60min_R1 1 FRSPAAPSPLALR 13 1 Q9P270;D6RIF6;H0Y9L2 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 FRS(1)PAAPSPLALR 53.169 0.0062837 1784400.0 354.71 499.52 575.01 391.17 614.65 501.5 443.83 491.07 583.41 608.87 479.02 True False 390.7198980762993 541.6163034655921 614.0336364160245 415.33168248847335 571.4791044273868 497.4159502717954 460.7201935230952 481.2752236130374 558.8913065629254 570.4258442895954 420.10357675796695 0.9300561092375645 1.2892446849545198 1.4616243954756565 0.988641148198929 1.3603290617938046 1.1840316954939192 1.0966823874211586 1.1456108689365267 1.3303655038502988 1.3578219178510664 1.0 8.714601258743679 -11.028667425443068 1.3154205639649075 0.9998109854480985 1.2168997770442667 0.0 0.18445632245375018 0.5405401288627472 1.6640633550876065 0.10414891875109519 0.023348325147760123 9.361222645839135e-12 11.028667425443068 0.21708879159616812 FRT(ph)ITSSYYR ddPTM_A549_MK2206_60min_R1 4 FRTITSSYYR 10 1 P62820;E7END7;Q9H0U4 P62820;Q9H0U4 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B 1 FRT(1)ITSSYYR;FRT(0.965)IT(0.012)S(0.018)S(0.005)YYR;FRT(0.999)IT(0.001)SSYYR;FRT(1)ITSSYYR 110.38 7.4652e-05 28016000.0 5931.73 5302.12 5762.469999999999 5172.790000000001 7580.389999999999 6410.8099999999995 5242.13 6024.81 8490.93 8019.299999999999 8285.800000000001 True False 6932.861007125146 5571.975260814423 6579.674895611998 6440.123782215366 6465.324672681908 7089.197659048731 6194.557165770199 6878.845267706803 6567.747912228994 6207.734560354266 6228.2071835535635 1.1131391109519153 0.8946355020956895 1.0564316024981528 1.0340252969139174 1.0380715480619345 1.1382405000541298 0.9945971582525029 1.1044663520300575 1.054516607856597 0.9967129187266991 1.0 12.604601221647064 -4.930671557828114 22.146576002399613 1.032368329316681 3.8849485083954804 0.13155374586936752 0.06047381973514387 1578.9545052512697 545336.6412808647 0.007545270362965987 18118.208990397197 1.1730821924020206e-05 4.930671557828114 2.8525801790787995 FRT(ph)ITSSYYR ddPTM_A549_PD325901_60min_R1 3 FRTITSSYYR 10 1 P62820;E7END7;Q9H0U4 P62820;Q9H0U4 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B 1 FRT(1)ITSSYYR;FRT(0.998)IT(0.001)SSYYR;FRT(0.995)IT(0.002)S(0.003)SYYR 110.38 7.4652e-05 79749200.0 4882.17 4419.5 4858.3 4914.39 5493.04 4668.79 4611.35 5322.32 5502.0 5696.710000000001 5304.2 True False 5377.804304336402 4791.9467752366 5188.013453331201 5217.940708910519 5107.227820359248 4630.768922172393 4786.837447677546 5216.162152320734 5270.770073720393 5337.018758393391 4651.81702609413 1.1560653125799842 1.0301236588533942 1.115266018467473 1.1216994734833179 1.0978995501565334 0.995475294104719 1.0290253079229097 1.1213171375961133 1.1330561894748392 1.147297653466518 1.0 12.183578635828736 -10.990980303978217 1.277437323048415 1.0001924444002015 1.0904755262317272 0.0 0.06435695502295792 0.4507396936993546 1.313497143193407 0.035028505177099656 0.00809276501437122 1.0209857861663377e-11 10.990980303978217 0.09028308183152567 FRT(ph)ITSTYYR ddPTM_A549_MK2206_60min_R1 1 FRTITSTYYR 10 1 Q15286-2;Q15286 Q15286-2 RAB35 Ras-related protein Rab-35 1 FRT(0.999)IT(0.001)STYYR 46.88 0.013574000000000001 1949300.0 437.53 363.93 287.37 303.94 516.03 366.88 284.24 290.86 695.69 417.49 593.31 True False 511.37436741852116 382.45248252928883 328.12338715030535 378.4053136443849 440.1226705808072 405.7029980847662 335.88272873784547 332.0902957213921 538.1173257886462 323.1787190406023 445.9747524770286 1.14664420929268 0.857565322711824 0.7357443113715422 0.8484904392965068 0.98687799732223 0.9096994747604311 0.7531429231638986 0.7446392287386213 1.2066093939171225 0.7246569839337457 1.0 8.800818228379503 -8.76360860103965 24.999944516059475 1.097565547123415 0.8679977397326021 0.0 0.165247804228332 43.22957540914718 498212.9068816964 0.022821875721696902 0.024880517864409844 1.7234210730619332e-09 8.76360860103965 -0.22956780739081284 FRT(ph)ITSTYYR ddPTM_A549_PD325901_60min_R1 2 FRTITSTYYR 10 1 Q15286-2;Q15286 Q15286-2 RAB35 Ras-related protein Rab-35 1 FRT(0.999)IT(0.001)STYYR;FRT(1)ITSTYYR 104.17 0.00013964 16753500.0 1627.7 1401.8200000000002 1467.2199999999998 1426.78 2021.74 1678.31 1919.8200000000002 1805.92 1963.76 2072.96 2056.17 True False 1792.942905750592 1519.9562910877178 1566.7943723106018 1514.9089601475164 1879.7399570243629 1664.642399801908 1992.879800665813 1769.8995088831675 1881.2299963593534 1942.072951826434 1803.2741251355465 0.9942708547519485 0.8428869853458733 0.8688608961174058 0.8400880038322767 1.042403886809538 0.923122212312996 1.105145231602552 0.9814922114241116 1.0432301834408828 1.076970453219615 1.0 10.816403009725574 -6.766016946759547 24.999986681620246 1.0181614198396833 0.8821477155136761 0.5525819780433513 0.05954854863514455 58.30682602545183 318440.132854765 0.007521591635943938 0.014557869835023069 1.713890427875195e-07 6.766016946759547 -0.13601370432600723 FRT(ph)ITTAYYR ddPTM_A549_MK2206_60min_R1 1 FRTITTAYYR 10 1 P61006;H0YMN7;H0YNE9;Q92930;P61006-2 P61006;P61006-2 RAB8A;RAB8B Ras-related protein Rab-8A;Ras-related protein Rab-8B 1 FRT(1)ITTAYYR 92.295 0.00024672 5834400.0 1352.1 1277.2 1426.2 1370.0 2317.4 1884.2 1824.2 1652.8 2545.4 1965.7 2029.3 True False 1580.3014243288053 1342.2040246377271 1628.4566056086771 1705.6500615016369 1976.5135298412183 2083.5847933692644 2155.633527172734 1887.0894614877136 1968.87096416855 1521.6470047620592 1525.3688041692105 1.0360126810050463 0.8799209876124064 1.0675822143193843 1.118188635325223 1.2957610804933977 1.3659547695444612 1.41318841796217 1.237136524838997 1.2907507737060955 0.9975600658693302 1.0 10.574942384792385 -6.17919838087067 2.398952666825684 1.1952235923260068 0.9611915563505794 0.36607380205013007 0.13231443396134107 0.31480976853569337 3.493454137294735 0.022607387370379182 0.07289347559929539 6.619140796733797e-07 6.17919838087067 -0.23403203597542743 FRT(ph)ITTAYYR ddPTM_A549_PD325901_60min_R1 3 FRTITTAYYR 10 1 P61006;H0YMN7;H0YNE9;Q92930;P61006-2 P61006;P61006-2 RAB8A;RAB8B Ras-related protein Rab-8A;Ras-related protein Rab-8B 1 FRT(0.999)IT(0.001)TAYYR;FRT(0.998)IT(0.002)TAYYR;FRT(0.991)IT(0.008)T(0.002)AYYR 80.469 0.00047002 24517800.0 2863.24 2863.35 3686.6 3141.86 3342.63 4116.85 3203.1800000000003 3383.6499999999996 4621.37 3735.12 3807.87 True False 3153.9140169941165 3104.6545534277 3936.79484532672 3335.925556518224 3107.855200247484 4083.323738537267 3325.078767747352 3316.1604463279236 4427.149890147077 3499.2838857604324 3339.5261300767406 0.9444196254639401 0.9296691903280172 1.1788483431438983 0.9989218309968924 0.9306276037960113 1.2227254944231967 0.9956738286311726 0.9930032936294827 1.325682063175036 1.0478384505648473 1.0 11.705427687274568 -7.653031466997298 0.9839392856337676 1.1431490010340848 1.0061556212813638 0.03221648577116265 0.12358522298377346 0.8095442637275343 1.5784838967890846 0.02698366471734365 0.04920352603659414 2.2231488055932804e-08 7.653031466997298 -0.13699337975272097 FRT(ph)PSFLK ddPTM_A549_MK2206_60min_R1 2 FRTPSFLK 8 1 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 FRT(1)PSFLK;FRT(0.999)PS(0.001)FLK 59.426 0.0049686999999999995 15833200.0 1542.9099999999999 1159.12 1763.13 1563.3200000000002 1760.65 1558.62 1954.72 1660.6499999999999 2191.3199999999997 2020.5500000000002 1890.2 True False 1803.3154874721972 1218.1142569981853 2013.1683459871156 1946.3334701801025 1501.660717318952 1723.5521338717772 2309.86732169449 1896.0522230273311 1694.9895188189785 1564.1063516670793 1420.8111731339075 1.2692154464794878 0.857337188805582 1.4169147766107693 1.3698748341674718 1.0569037925051739 1.2130761402094754 1.6257384270138981 1.3344857211709396 1.1929731063983056 1.1008544845668007 1.0 10.472499116734069 -9.895731155087878 1.0108701215964786 1.0275575312887493 1.2597067023057442 0.1515786995717362 0.18894491256121304 0.5600015434365714 1.1664301540780018 0.06500984783861133 0.03715121366194171 1.2713608827236876e-10 9.895731155087878 0.23214917101699495 FRT(ph)PSFLK ddPTM_A549_PD325901_60min_R1 2 FRTPSFLK 8 1 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 FRT(1)PSFLK;FRT(0.997)PS(0.003)FLK 66.19 0.0034040999999999997 28929000.0 2796.4 2677.3999999999996 2661.1000000000004 2985.8 3058.9 2569.3 2480.5 3039.0 3115.0 3145.2 2791.8999999999996 True False 3080.2884693991264 2903.033894336118 2841.69824849426 3170.2260847562025 2844.0534166321204 2548.3764726487007 2574.896784881683 2978.384760950622 2984.0873827042947 2946.61153523681 2448.51399931228 1.2580236299503678 1.1856309153843925 1.160580764207358 1.2947551395036465 1.1615426407326799 1.0407849305188654 1.0516161172061504 1.2164050366006354 1.2187340499349575 1.2034285023750864 1.0 11.257690729302054 -10.845964515719185 0.9736371322283406 0.9947063389084215 1.1757398593319053 0.0 0.09405480734184381 0.478254750814364 0.7657106866924599 0.06286813255613845 0.013680803367167621 1.4257240784504965e-11 10.845964515719185 0.18103352042348375 FRT(ph)QPITSAER ddPTM_A549_PD325901_60min_R1 1 FRTQPITSAER 11 1 O95425-4;O95425;A0A6I8PIX7;O95425-3 O95425-4;O95425-3 SVIL Supervillin 1 FRT(1)QPITSAER 74.85300000000001 0.00054312 4103500.0 1493.0 1859.7 1587.3 1781.6 1911.7 1458.5 1365.9 1705.7 1763.2 1831.8 1978.1 True False 1644.5682609114908 2016.4234456177187 1695.0237232103018 1891.645385692829 1777.4287870069709 1446.6224595641334 1417.8800719491599 1671.6784754042367 1689.0988356931653 1716.139835383056 1734.806240209041 0.9479838282765938 1.162333521105356 0.9770680344140649 1.0904072984340252 1.024569053194548 0.8338812865866899 0.8173132186671797 0.963611057337909 0.9736527322438221 0.9892400635913461 1.0 10.760558822451442 -7.016974276779816 24.544398997667 0.960190809330289 1.0492347613891462 0.2898124681611779 0.07916378243560475 706.5575200356755 1021666.4436854138 0.012082075300809516 0.02126297896353628 9.616692362727513e-08 7.016974276779816 0.08904395205885718 FRTPS(ph)FLK ddPTM_A549_MK2206_60min_R1 1 FRTPSFLK 8 1 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 FRT(0.089)PS(0.911)FLK 46.606 0.010956 19575000.0 530.18 589.4 627.08 421.25 531.67 581.31 478.64 515.98 945.93 868.52 943.29 True False 619.6614223434996 619.397942469054 716.0093733312922 524.4562689106309 453.4620472989902 642.823838357652 565.6026923834872 589.1217451224777 731.6783653398123 672.320728786663 709.0450595204127 0.8739380015744403 0.8735664033651195 1.009822103288598 0.739665641652401 0.6395391113869477 0.9066050594759778 0.7976964013627742 0.8308664410142717 1.0319208286067298 0.9482059281837611 1.0 9.469733502826275 -8.758573843892579 24.95823439706237 1.0150737312195257 0.8327330573374665 0.36898950369216976 0.0916424179458941 48.198928742507306 419802.56138780265 0.01563260409616158 0.017346689275487052 1.7435168788672493e-09 8.758573843892579 -0.1823406738820592 FRTPS(ph)FLK ddPTM_A549_PD325901_60min_R1 2 FRTPSFLK 8 1 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 FRT(0.029)PS(0.971)FLK;FRT(0.035)PS(0.965)FLK 83.86200000000001 0.00091214 32092000.0 1858.6 1897.4 1841.6 2072.1 2193.4 1891.4 1851.3 2309.5 2016.9 2250.6 2530.0 True False 2047.2837037709949 2057.3005569258794 1966.5820504404292 2200.088910919459 2039.3431508192132 1875.9970654916704 1921.7522345702316 2263.4352107322998 1932.1367069586825 2108.4967319102016 2218.826038991392 0.9226877942633236 0.9272022775886761 0.88631646459962 0.9915553866131612 0.919109076142911 0.8454908282690062 0.8661121695884726 1.0201048531777577 0.8707923347776153 0.9502758192204456 1.0 11.115580846057947 -11.009965837638026 1.24080736476679 1.0008731118018137 0.9127424593802763 0.135402139722409 0.051659047658708886 0.49085042676385204 1.3230172208261417 0.03724612941192118 0.008098547306544697 9.773140951647937e-12 11.009965837638026 -0.08813065242153739 FRYS(ph)GK ddPTM_A549_MK2206_60min_R1 2 FRYSGK 6 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2;Q5JV61;A2A2Y4-2;A2A2Y4;A2A2Y4-3;A2A2Y4-5 Q9HCM4-4;A2A2Y4-2 EPB41L5;FRMD3 Band 4.1-like protein 5;FERM domain-containing protein 3 1 FRY(0.016)S(0.984)GK;FRY(0.016)S(0.984)GK 54.157 0.023437 44697000.0 8699.8 12439.1 8323.9 6975.9 12363.099999999999 8951.900000000001 8203.7 10086.1 11556.9 10964.0 10888.1 True False 10168.113550311182 13072.19705830814 9504.354185546243 8684.99581316005 10544.504367299543 9899.184116209703 9694.206099587189 11515.835562385799 8939.280602577011 8487.224785171293 8184.2842737272795 1.2423949621290988 1.5972315502617325 1.161293262510025 1.0611796368119968 1.2883844224654937 1.2095357132189917 1.184490393461402 1.407066907408541 1.0922495240388188 1.0370149058014144 1.0 12.998640541325722 -4.253993309111728 0.0331575988778254 4.159920653185761e-07 2.772770461137759 0.30496752315735687 0.1397195363399305 410.89275926549396 1.5479573626528484 46.18338806961812 89.49580938467449 5.571943331909211e-05 4.253993309111728 2.772770045145694 FRYS(ph)GK ddPTM_A549_PD325901_60min_R1 4 FRYSGK 6 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2;Q5JV61;A2A2Y4-2;A2A2Y4;A2A2Y4-3;A2A2Y4-5 Q9HCM4-4;A2A2Y4-2 EPB41L5;FRMD3 Band 4.1-like protein 5;FERM domain-containing protein 3 1 FRY(0.002)S(0.998)GK;FRY(0.172)S(0.828)GK;FRY(0.062)S(0.938)GK;FRY(0.057)S(0.943)GK 65.252 0.01605 89540200.0 9234.9 9327.1 9379.800000000001 8206.130000000001 10842.2 9311.6 9564.4 8991.699999999999 8619.0 10520.5 10607.2 True False 10172.420249625937 10113.127450460299 10016.369633319464 8713.004012626567 10080.681275559442 9235.769416851144 9928.378475840504 8812.353489647814 8256.77340337988 9856.233834560244 9302.58164458083 1.0935050761475258 1.087131275687502 1.0767300966559585 0.9366221491538621 1.0836434078954726 0.9928178832196967 1.0672713075970934 0.947301923953702 0.8875787086684501 1.059515972138975 1.0 13.183415431955085 -8.270442530147962 22.865675466052792 0.9454580538396906 1.0457734002387742 0.21154145559045356 0.06097625243273797 153.9234503753975 390925.22697754833 0.009512342379324858 0.011598556451252127 5.364848593687536e-09 8.270442530147962 0.10031534639908357 FRYS(ph)GKTEYQTTK ddPTM_A549_MK2206_60min_R1 2 FRYSGKTEYQTTK 13 2 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 FRYS(0.955)GKT(0.045)EYQTTK;FRY(0.002)S(0.946)GKT(0.052)EYQTTK 86.455 4.5518e-05 54482000.0 9552.6 11349.2 9805.900000000001 7043.1 11516.8 7626.7 7436.0 6452.4 11007.5 13718.0 18835.7 True False 11164.845341352964 11926.825803647425 11196.524070213238 8768.659816176769 9822.693976212711 8433.752331806272 8787.02494685695 7367.047459646256 8514.318825365493 10619.094272435223 14158.275851126 0.7885737966085066 0.8423925292216207 0.7908112674130999 0.6193310476769247 0.693777553107324 0.5956765089539868 0.6206281781236889 0.5203350702522411 0.6013669259515348 0.7500273609650494 1.0 13.78935796894782 -10.770824999837432 1.0418928133698908 0.9982750552517675 0.6709887634359741 0.21441211719315056 0.11747435936896308 0.30215310609484225 0.5872345376696942 0.07133744846392052 0.018464115383564475 1.695020676123963e-11 10.770824999837432 -0.3272862918157934 FRYS(ph)GKTEYQTTK ddPTM_A549_PD325901_60min_R1 4 FRYSGKTEYQTTK 13 2 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 FRYS(0.995)GKT(0.005)EYQTTK;FRY(0.003)S(0.99)GKT(0.007)EYQTTK;FRY(0.003)S(0.897)GKT(0.1)EYQTTK;FRYS(0.996)GKT(0.003)EYQTTK 92.211 3.8563e-05 131115000.0 30064.3 26601.7 25038.999999999996 24983.899999999998 27935.2 27358.7 23777.100000000002 27201.3 26206.1 29411.0 41468.0 True False 33116.405603832114 28843.518617674275 26738.297111738633 26527.098760446257 25973.127923208216 27135.89981794809 24681.95055182836 26658.748732492946 25104.748751167597 27553.984440687356 36367.69888731028 0.9105994224833225 0.7931081564178534 0.7352210321194773 0.7294137262476706 0.7141812299889827 0.7461538851284477 0.678677818695881 0.7330336960580955 0.6903034703668687 0.7576499279227623 1.0 15.150370023822726 -10.784234916229787 0.9714062371570057 1.0039394268366437 0.7422068941120176 0.03580470241606282 0.09169544685539235 0.24965488003087882 0.4080447071356694 0.046224002113761604 0.010954679184039688 1.6434824990463847e-11 10.784234916229787 -0.26173253272462615 FRYS(ph)GR ddPTM_A549_MK2206_60min_R1 1 FRYSGR 6 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;A0A087WVP2;H0YKW6;H0Y5N1;B5MC67;Q7Z6J6-2;Q7Z6J6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;J3KT37;O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0;P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0;A0A1B0GWG0;A0A2R8Y6D0 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4;Q9Y2J2;O43491;P11171;A0A1B0GWG0 EPB41L1;FRMD5;EPB41L3;EPB41L2;EPB41 Band 4.1-like protein 1;FERM domain-containing protein 5;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Band 4.1-like protein 2;Protein 4.1 1 FRYS(1)GR 62.88 0.050378 109350000.0 4124.6 5918.5 4967.3 3503.7 5673.9 4645.8 3963.8 4443.0 5673.1 5362.4 5371.2 True False 4820.731643211739 6219.726370042582 5671.737832730318 4362.1066572870695 4839.2768261698775 5137.4154723675465 4683.971151741743 5072.80885611684 4388.151908079127 4151.030115651454 4037.3828024213562 1.194023920724233 1.5405342209097437 1.4048055659544552 1.0804292955998538 1.1986172882263229 1.272461820882197 1.1601503699209808 1.2564597176850565 1.0868803189649003 1.028148758438744 1.0 11.979204666370933 -7.199508486565918 0.20202988933850302 0.9423940134830413 1.5238368772517892 0.474653169932996 0.11240431486330389 2.967815410211348 0.24962084677462099 0.17109040907579437 0.4964072023362034 6.316718356421953e-08 7.199508486565918 0.5814428637687479 FRYS(ph)GR ddPTM_A549_PD325901_60min_R1 4 FRYSGR 6 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;A0A087WVP2;H0YKW6;H0Y5N1;B5MC67;Q7Z6J6-2;Q7Z6J6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;J3KT37;O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0;P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0;A0A1B0GWG0;A0A2R8Y6D0 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4;Q9Y2J2;O43491;P11171;A0A1B0GWG0 EPB41L1;FRMD5;EPB41L3;EPB41L2;EPB41 Band 4.1-like protein 1;FERM domain-containing protein 5;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Band 4.1-like protein 2;Protein 4.1 1 FRY(0.062)S(0.938)GR;FRY(0.002)S(0.998)GR;FRYS(1)GR;FRY(0.007)S(0.993)GR 70.525 0.023744 1566303000.0 10471.5 11113.79 10968.300000000001 10755.399999999998 12746.14 11080.0 11088.400000000001 11199.099999999999 10245.789999999999 11036.279999999999 11341.7 True False 11534.558971289134 12050.388087149406 11712.674795745954 11419.73663071432 11850.895098195868 10989.76815356229 11510.375129805305 10975.725164976002 9815.195076994487 10339.447397336666 9946.742800959957 1.1596317711337563 1.2114908697535063 1.1775387209786472 1.1480880584961144 1.1914347576225799 1.104860995551395 1.1572004383881769 1.1034491777465822 0.986774793859878 1.0394807229094944 1.0 13.280008457130593 -8.5804219583425 2.4639122571161614 0.9930148295002198 1.1651880100611178 0.8378434520377198 0.029620511019676332 0.05986836809397873 0.7276248264363873 0.004684675624894999 0.005392276365565031 2.627713677774267e-09 8.5804219583425 0.17217318056089803 FRYS(ph)YYDESQGEIYR ddPTM_A549_PD325901_60min_R1 1 FRYSYYDESQGEIYR 15 1 Q9Y316-2;Q9Y316;Q9Y316-3 Q9Y316-2 MEMO1 Protein MEMO1 1 FRY(0.101)S(0.861)Y(0.028)Y(0.008)DES(0.001)QGEIYR 45.916000000000004 0.010414 4436000.0 1487.8 1590.1 1534.7 1979.2 1774.4 1659.0 1915.6 1747.3 2048.3 2083.6 1935.4 True False 1638.840360739528 1724.1033074564357 1638.8539709008062 2101.4506889106674 1649.7722653476853 1645.4896540396976 1988.4992062565411 1712.4487307696677 1962.2170741551229 1952.0411404106 1697.3580695114383 0.9655242403927453 1.01575698046594 0.9655322588312366 1.2380715222425294 0.9719647816106062 0.9694416773906342 1.1715260568613575 1.0088906763571537 1.1560419156106057 1.1500467552921634 1.0 10.72907522822033 -7.726194473582111 24.99966284267703 1.076338688693075 1.0259182320969882 0.13092895065843024 0.0903174916723171 432.91505145556874 307071.6104503507 0.014279858329080991 0.021179935093742202 1.878475462211432e-08 7.726194473582111 -0.05042045659608685 FS(ph)ASIEKER ddPTM_A549_PD325901_60min_R1 1 FSASIEKER 9 1 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 FS(0.578)AS(0.422)IEKER 47.288000000000004 0.009684100000000001 6093400.0 1720.1 1251.7 1524.9 1607.5 1453.2 2234.0 1827.8 1598.1 1510.0 1719.2 1823.9 True False 1894.7232857293075 1357.1851518415326 1628.3888839686194 1706.791624102616 1351.1322452678396 2215.807044680339 1897.3579292105383 1566.2246418148034 1446.5399511664489 1610.6494185994918 1599.5718626547048 1.1845190140971593 0.8484677578593445 1.0180154590029415 1.067030287260721 0.8446836786847787 1.3852500762315918 1.186166107011671 0.9791524084547492 0.9043294552366788 1.0069253255845614 1.0 10.643470093349904 -8.49961605924465 23.861865338080978 0.9541337458522718 1.068970116402541 0.10012204895774146 0.14647880045244058 717.4770720023672 735958.1782367512 0.024083354585458485 0.029004426119196017 3.1650745276412145e-09 8.49961605924465 0.11483637055026907 FS(ph)GFYSMQK ddPTM_A549_MK2206_60min_R1 1 FSGFYSMQK 9 0 Q9NZV1 Q9NZV1 CRIM1 Cysteine-rich motor neuron 1 protein;Processed cysteine-rich motor neuron 1 protein 1 FS(0.978)GFY(0.002)S(0.02)MQK 55.721000000000004 0.0060609999999999995 6310600.0 1354.2 1935.6 2065.2 1975.4 2891.9 2137.7 2033.8 2650.3 3072.1 3342.4 3558.9 True False 1582.7558529887353 2034.113772383953 2358.076414179664 2459.373088679077 2466.5053408767653 2363.9099951095836 2403.3151340663876 3025.988141203348 2376.274255135619 2587.3495186023847 2675.126909356822 0.5916563612188686 0.7603802889759024 0.8814820732174585 0.9193481924453375 0.9220143284603214 0.8836627476779918 0.8983929419050306 1.1311568548838988 0.8882846816814923 0.9671875788593739 1.0 11.385391619972763 -4.707679772756936 0.735038332373371 0.9535648087249038 9.27503195040902e-17 0.7504792806885752 0.06457620519203838 2.0942451183573776 0.4530913392401695 0.01086845193098529 1.9969019650046478 1.9602895611877432e-05 4.707679772756936 -0.9535648087249037 down FS(ph)GFYSMQK ddPTM_A549_PD325901_60min_R1 2 FSGFYSMQK 9 0 Q9NZV1 Q9NZV1 CRIM1 Cysteine-rich motor neuron 1 protein;Processed cysteine-rich motor neuron 1 protein 1 FS(0.988)GFY(0.002)S(0.01)MQK;FS(0.988)GFY(0.001)S(0.011)MQK 84.507 0.00047829 24258000.0 14831.8 16408.1 17833.0 17107.0 20987.0 19326.8 19117.0 19561.3 17761.0 19550.4 19425.5 True False 16337.513417405917 17790.868171231967 19043.25461854049 18163.660537184114 19512.945521219488 19169.40894858011 19844.507896223782 19171.13452595701 17014.566935541257 18315.98440750787 17036.286648390243 0.9589832429210532 1.0442926054494994 1.1178054825897101 1.066174860288606 1.1453755107521195 1.1252105194174709 1.164837637789975 1.1253118077681845 0.9987250911365102 1.07511600300753 1.0 14.056323289188278 -8.771607958924504 24.963498401272716 0.99939794857995 1.0969223869477116 0.1822320266505577 0.05837108736543347 149.10083562119823 366036.0282672956 0.00960561770159937 0.010282891709286783 1.6919675950499853e-09 8.771607958924504 0.09752443836776159 FS(ph)GGFGAR ddPTM_A549_MK2206_60min_R1 3 FSGGFGAR 8 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 1 FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR 57.858999999999995 0.015816999999999998 217212000.0 3869.89 4865.150000000001 4166.469999999999 3797.66 5581.4 4096.28 3543.05 4901.63 6199.8 4990.2 5931.6 True False 4523.032822273352 5112.7653542642 4757.338096739856 4728.086870483435 4760.383453635869 4529.745630709403 4186.776323017957 5596.451063112313 4795.5551990461945 3862.910354155581 4458.620016168181 1.0144468032421676 1.146714753830537 1.0669978781525318 1.0604372773051063 1.0676809049377187 1.0159523830878838 0.9390296342445771 1.25519803051573 1.0755693873118126 0.8663914709366591 1.0 12.122381536534313 -10.531841401627728 1.0974375187586156 1.0041073814383854 1.0716632912881319 0.19854367813012797 0.08688779503207651 0.8171887073774228 1.8928674302393758 0.03623370324552129 0.013015542041120307 2.9387226371229685e-11 10.531841401627728 0.06755590984974646 FS(ph)GGFGAR ddPTM_A549_PD325901_60min_R1 2 FSGGFGAR 8 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 1 FS(1)GGFGAR;FS(1)GGFGAR 146.68 0.00081062 396770000.0 10054.4 10480.0 10090.0 10950.0 12047.099999999999 9979.2 10231.2 10527.2 10139.3 10341.7 10675.599999999999 True False 11075.115286341923 11363.186379563193 10774.768076099004 11626.35663074567 11200.953256238787 9897.93270379322 10620.553914727465 10317.226737571358 9713.180481365542 9688.723297074439 9362.568878204152 1.1829141585408829 1.2136825402712317 1.150834585706752 1.2417913055690906 1.1963546973004762 1.0571812963464955 1.1343632343738344 1.1019653763605015 1.0374482268405636 1.0348359967347815 1.0 13.192688711838606 -8.063999251567362 0.5477488009535219 1.0050775762829771 1.20684222062618 0.7625285674926994 0.03808978939732509 0.2324117121946508 0.1487847590930911 0.010248821877840809 0.01673322351514388 8.629800349649314e-09 8.063999251567362 0.20176464434320285 FS(ph)MPDLSK ddPTM_A549_MK2206_60min_R1 1 FSMPDLSK 8 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 FS(0.998)MPDLS(0.002)K 64.297 0.009487200000000001 1143700.0 1254.8 1294.0 1584.9 1287.3 2194.2 2037.9 1652.0 1834.7 2699.8 2174.6 2168.8 True False 1466.5795630854116 1359.859072879125 1809.6626519626916 1602.688557789093 1871.436086639163 2253.5492253514626 1952.1470161656384 2094.7743435331013 2088.2996106946853 1683.3563496747074 1630.2271041650736 0.8996167217060995 0.8341531492175634 1.1100678226605223 0.9831075398601691 1.1479603558656482 1.3823529369582073 1.1974693655737232 1.2849586037314398 1.280986928360644 1.0325900884446675 1.0 10.670857242511095 -6.049341781919295 1.2179468360294863 1.1691797621217137 0.8517343281994042 0.47817924878813023 0.11877148399552162 0.4707773210967418 1.1526621136756028 0.02109630434426983 0.13041415644728555 8.926027449972175e-07 6.049341781919295 -0.3174454339223095 FS(ph)MPDLSK ddPTM_A549_PD325901_60min_R1 2 FSMPDLSK 8 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 FS(0.998)MPDLS(0.002)K;FS(0.998)MPDLS(0.002)K 64.297 0.009487200000000001 3405000.0 4395.1 5239.7 5093.1 5145.4 5353.6 4545.8 5537.1 4756.4 5903.2 5854.9 6012.6 True False 4841.287316498389 5681.267907728749 5438.7483932983 5463.219671948745 4977.58160491736 4508.7805119551895 5747.8173705173795 4661.5298706763815 5655.109032930977 5485.220614796512 5273.0883170117195 0.918112313969732 1.0774080702195306 1.03141613914414 1.0360569259429309 0.94395946088348 0.8550549964067989 1.0900286558778312 0.8840227188377701 1.0724472439968065 1.0402292328577967 1.0 12.364432444749417 FS(ph)MPGFK ddPTM_A549_MK2206_60min_R1 1 FSMPGFK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FS(1)MPGFK 49.813 0.053706 880870.0 768.29 733.97 599.46 509.74 895.34 805.24 599.87 804.3 1262.5 872.69 1259.9 True False 897.9585691129192 771.3259379606583 684.4724420124647 634.626322883098 763.6366720497259 890.4499623249484 708.8586141569499 918.3119880654459 976.5457657982223 675.5487228904722 947.0320585289443 0.9481818076018963 0.8144665547635039 0.7227553025772729 0.670121266928264 0.8063472246503541 0.940253240960093 0.7485054046196103 0.9696736026992474 1.0311644225805012 0.7133324757134664 1.0 9.887269453797728 -8.386448247343157 4.540285162223568 1.0141082548735278 0.8043784864491839 0.05742051335992182 0.12001897761674396 0.11821736535333036 3.885863315355235 0.013335140555098865 0.016164708644564606 4.107255810299475e-09 8.386448247343157 -0.209729768424344 FS(ph)PDSQYIDNR ddPTM_A549_MK2206_60min_R1 2 FSPDSQYIDNR 11 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 FS(0.999)PDS(0.001)QYIDNR;FS(1)PDSQYIDNR 237.65 6.824900000000001e-50 65389000.0 6328.299999999999 6449.1 5195.9 4741.1 8122.6 6594.6 6077.6 6679.4 8129.2 7993.5 7755.5 True False 7396.362327919516 6777.331643666744 5932.7567501627545 5902.6697128360665 6927.776299943153 7292.436194858802 7181.821250271352 7626.225404804596 6287.949179664881 6187.762798273147 5829.595309088997 1.2687608548723361 1.1625732635505794 1.0176961582415365 1.0125350731693397 1.1883803133198574 1.2509335225189768 1.2319588015096146 1.3081912209093571 1.0786253326815427 1.061439511697446 1.0 12.509180019574098 -8.967404033754015 8.850862227141457 1.034458718509126 1.1742527532107039 0.3103754933184878 0.08995484660773193 0.23353637484802195 56.442760094891085 0.017478154873488014 0.018270201202145293 1.077943421019436e-09 8.967404033754015 0.1397940347015778 FS(ph)PDSQYIDNR ddPTM_A549_PD325901_60min_R1 2 FSPDSQYIDNR 11 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 FS(0.999)PDS(0.001)QYIDNR;FS(1)PDSQYIDNR 279.56 9.996899999999998e-92 84349000.0 15136.0 16141.7 16335.300000000001 16589.5 18975.3 15555.0 15909.0 16169.5 16488.3 19284.0 18859.5 True False 16672.595577465712 17502.01770830108 17443.911690138757 17614.19573751189 17642.54038923125 15428.325237243807 16514.42570073883 15846.98663777264 15795.35409060778 18066.404948971976 16539.901060220625 1.008022691112961 1.0581694318833863 1.0546563505202777 1.0649516991292654 1.0666654126282855 0.9327942882530162 0.998459763490178 0.9581064953215178 0.954984799068507 1.0922922019420465 1.0 14.013662984049207 -7.248239944199664 24.996665251357072 0.9752994639913873 1.0519541274029316 0.31241723464609716 0.04232993205488214 345.6303533749889 654543.5674214757 0.0037315157379101955 0.006439236761658823 5.646249378955155e-08 7.248239944199664 0.07665466341154425 FS(ph)PGAPGGSGSQPNQK ddPTM_A549_MK2206_60min_R1 3 FSPGAPGGSGSQPNQK 16 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK 233.84 6.484399999999999e-56 60867900.0 9494.4 11312.0 10577.400000000001 10421.3 14397.199999999999 11783.0 11918.0 12958.4 14167.5 13219.800000000001 15451.699999999999 True False 11096.822604206352 11887.732482541473 12077.434371171794 12974.518967829938 12279.390951855507 13029.869239077616 14083.346330909244 14795.292883435623 10958.583870848572 10233.43799845015 11614.616444774741 0.9554187740051169 1.0235148563936953 1.0398478872374015 1.117085443976671 1.057236027572812 1.1218510142829192 1.2125537160760183 1.2738511817229938 0.9435166389656104 0.8810827328744063 1.0 13.503653891650702 FS(ph)PPPVGGQGK ddPTM_A549_MK2206_60min_R1 2 FSPPPVGGQGK 11 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 FS(1)PPPVGGQGK;FS(1)PPPVGGQGK 90.05 0.00030014 5772900.0 4832.4 4889.2 4580.9 4587.9 6064.0 5253.9 5302.0 4948.9 7395.8 6883.799999999999 6950.299999999999 True False 5647.990979163169 5138.039396538343 5230.540502477057 5711.935705958657 5171.993632932228 5809.864210743435 6265.30476980037 5650.421730370612 5720.663108665739 5328.744798993265 5224.348691478467 1.0810899717271385 0.9834794153229273 1.0011851833337024 1.0933297226648564 0.9899786439156261 1.1120743567939892 1.1992508807882265 1.0815552452666723 1.0950002472072393 1.0199826071496876 1.0 12.35103547532104 -4.886337885970201 20.01932637040357 1.0550683064073794 5.991475550204949 0.009807620234886794 0.06348006691866119 3484.896027588775 571549.5684567605 0.00924232705537966 54292.8686157811 1.299158424937349e-05 4.886337885970201 4.93640724379757 FS(ph)PPPVGGQGK ddPTM_A549_PD325901_60min_R1 2 FSPPPVGGQGK 11 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 FS(1)PPPVGGQGK;FS(1)PPPVGGQGK 89.54799999999999 0.00030158 6745300.0 6285.9 7083.9 7315.1 8452.099999999999 9268.5 7476.8 7271.5 8121.3 8449.0 8015.099999999999 8689.5 True False 6924.039940564998 7680.885113949209 7811.5466752697575 8974.167020888164 8617.512534589174 7415.91141972514 7548.2209116174745 7959.314300463401 8093.917912188955 7509.025218134473 7620.746587278936 0.9085776388527433 1.0078914219206108 1.025036928574599 1.17759682966869 1.1307963643580679 0.9731213779112245 0.9904831272328978 1.0444271055738326 1.0620898909957022 0.9853398393628577 1.0 12.895716626869238 -11.019789554106481 1.3062102746566675 0.9999936438844569 1.04110895867083 0.04553366459744557 0.06975425650966116 1.4261780071224675 4.333015986971781 0.051663904955889225 0.011664972411857986 9.554554585130744e-12 11.019789554106481 0.04111531478637309 FS(ph)PPRHELS(ph)PPQK ddPTM_A549_PD325901_60min_R1 2 FSPPRHELSPPQK 13 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 2 FS(1)PPRHELS(1)PPQK;FS(1)PPRHELS(1)PPQK 70.96 0.0072708 7870600.0 1435.67 1216.07 989.3599999999999 1206.6 1723.63 1326.02 1128.21 1294.42 1316.34 1622.2399999999998 1419.1399999999999 True False 1581.4181615156067 1318.5524866980359 1056.5039191049866 1281.1289416125774 1602.5681750006936 1315.2213327605295 1171.1446489302007 1268.601777647155 1261.0188074956575 1519.81148954679 1244.5947766696625 1.2706289558335042 1.0594231242286525 0.8488738173335605 1.0293542650409273 1.2876224495244235 1.0567466274282884 0.9409847051294858 1.019289009907089 1.0131962877668048 1.2211295740880126 1.0 10.281460381292806 -7.532415244282057 24.03305515272614 1.002942916887929 1.088486400139562 0.01151965664654675 0.1301788191550426 222.70630973623875 561243.1704570075 0.017318449435761885 0.025708018046062365 2.934842203812435e-08 7.532415244282057 0.08554348325163308 FS(ph)PPRHELS(ph)PPQKR ddPTM_A549_MK2206_60min_R1 4 FSPPRHELSPPQKR 14 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 2 FS(1)PPRHELS(1)PPQKR;FS(1)PPRHELS(1)PPQKR;FS(1)PPRHELS(1)PPQKR;FS(1)PPRHELS(1)PPQKR 74.029 0.00038125 71539000.0 9854.56 11053.0 10402.089999999998 9339.98 16028.099999999999 11996.6 10444.0 12476.800000000001 17765.3 15765.6 16218.6 True False 11517.76880713976 11615.550488819914 11877.26277705507 11628.275519287627 13670.387722295685 13266.072249301407 12341.53961067429 14245.424608597483 13741.487915354579 12204.140010315272 12191.074009411499 0.9447706410647703 0.9527914013033404 0.9742589346833456 0.9538352002711662 1.121344002320235 1.0881791250762656 1.012342276090411 1.1685126837553466 1.1271761540243428 1.0010717678273207 1.0 13.573537609674704 -6.746572292189849 24.94336623764931 1.0717180588038902 0.9574298781886436 0.5456316292522541 0.05162476577759659 165.2673230699128 277276.8492511901 0.008479420313120375 0.017594572040581045 1.7923701715315037e-07 6.746572292189849 -0.11428818061524659 FS(ph)PPRHELS(ph)PPQKR ddPTM_A549_PD325901_60min_R1 4 FSPPRHELSPPQKR 14 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 2 FS(1)PPRHELS(1)PPQKR;FS(1)PPRHELS(1)PPQKR;FS(1)PPRHELS(1)PPQKR;FS(1)PPRHELS(1)PPQKR 93.37100000000001 1.8287e-05 114206000.0 15053.6 15610.2 14397.87 15698.1 16657.8 15130.199999999999 15090.800000000001 16075.2 15336.6 16601.8 18185.2 True False 16581.830390125393 16925.726338001663 15374.996039625717 16667.73598402818 15487.813594290286 15006.98466760182 15665.08865200261 15754.567525249553 14692.056036463136 15553.559514719078 15948.535685480741 1.0397086426700095 1.061271496756316 0.9640380999757135 1.0450950678313486 0.9711119503209383 0.9409631682527386 0.9822273944725737 0.9878378702561531 0.9212166136254452 0.9752343300632144 1.0 13.96113634860075 -6.115177335666659 0.7794639456183462 0.9637850274226673 1.0583057660403559 0.42158361133827926 0.031720818480395346 0.8392543737323271 0.6883498365532249 0.006021662259635309 0.0533718434544946 7.670482162537885e-07 6.115177335666659 0.09452073861768862 FS(ph)PTMGR ddPTM_A549_MK2206_60min_R1 4 FSPTMGR 7 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.956)PT(0.044)MGR;FS(0.98)PT(0.02)MGR;FS(0.957)PT(0.043)MGR;FS(0.876)PT(0.124)MGR 57.047 0.012819999999999998 98632400.0 11734.2 13484.7 12852.8 11774.300000000001 17516.600000000002 15103.5 14065.0 14940.6 20173.6 19504.399999999998 21170.0 True False 13714.646086353872 14171.013632189437 14675.520306105169 14659.004028568408 14939.931344099703 16701.742345108105 16620.428439691088 17058.475803668527 15604.311810619423 15098.342493605885 15912.904737723442 0.8618568584679367 0.8905359433589366 0.92224019108938 0.9212022738889077 0.9388563301508875 1.0495721944161853 1.0444622596332382 1.0719900662277813 0.9806073792189265 0.9488112159569121 1.0 13.957909588455697 -6.981261219654798 2.9452614354103144 1.005447421411029 0.8995053732135253 0.6911251329588475 0.03641966264524028 0.12768379037916963 2.265824928292982 0.005519693918724039 0.010753046110555945 1.044092029339517e-07 6.981261219654798 -0.10594204819750364 FS(ph)PTMGR ddPTM_A549_PD325901_60min_R1 4 FSPTMGR 7 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.984)PT(0.016)MGR;FS(0.926)PT(0.074)MGR;FS(0.941)PT(0.059)MGR;FS(0.929)PT(0.071)MGR 125.47 0.0060003 257444000.0 20334.1 20772.3 20732.899999999998 21047.300000000003 26304.5 19103.7 18707.5 19470.4 21474.6 22172.4 24579.6 True False 22398.40286282675 22522.85462139319 22139.959271055795 22347.343919113548 24456.96266559863 18948.12580101155 19419.424149636798 19082.047597766694 20572.097241933123 20772.430880034553 21556.465022922068 1.03905732405612 1.044830615661868 1.0270681787349303 1.0366887101085682 1.1345534919381408 0.8789996773990104 0.9008631113212279 0.8852122821379015 0.9543353801311014 0.9636288165961436 1.0 14.395832994001884 -7.262530774429341 24.998298815599743 0.9574861977878171 1.0530656906107387 0.6151323526822121 0.046994493945614946 73.92197697205991 1693183.4034548386 0.008111602221411588 0.0134266484817707 5.463478338971142e-08 7.262530774429341 0.09557949282292166 FS(ph)PVLGR ddPTM_A549_MK2206_60min_R1 4 FSPVLGR 7 0 Q9NRG9;Q9NRG9-2;F8VZ44 Q9NRG9 AAAS Aladin 1 FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR 95.741 0.011857 202809000.0 4461.639999999999 4635.07 3930.46 4168.93 6063.889999999999 4618.73 4664.05 4954.72 6630.7 6112.530000000001 5842.38 True False 5214.655755374877 4870.975265015335 4487.8583298840795 5190.318037150378 5171.899813786511 5107.480942935155 5511.447512558922 5657.066733193617 5128.8570370521 4731.705227663543 4391.555804514913 1.1874278700987344 1.1091684773782302 1.0219290223456021 1.1818859347783457 1.17769192605257 1.1630231221664558 1.2550102419039422 1.2881691557642616 1.167890666851865 1.0774553343484616 1.0 12.100516421192793 -10.448725121292256 0.9512919250782302 1.0070495042735172 1.170003957659182 0.3406938545501125 0.06906638218038644 0.38733215500034296 0.6655712466649439 0.03862582857960128 0.013406724832886505 3.558564801221485e-11 10.448725121292256 0.16295445338566483 FS(ph)PVLGR ddPTM_A549_PD325901_60min_R1 4 FSPVLGR 7 0 Q9NRG9;Q9NRG9-2;F8VZ44 Q9NRG9 AAAS Aladin 1 FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR 126.62 0.0058561 422203000.0 5999.660000000001 5871.490000000001 6366.63 6165.650000000001 7210.48 6378.8099999999995 6520.16 6785.49 7172.55 7312.2 7305.98 True False 6608.74106648375 6366.301068295947 6798.7077974563135 6546.488197292876 6704.0407596056 6326.863086247712 6768.288256768453 6650.148078836075 6871.112666714508 6850.50644409214 6407.390776423055 1.031424693309107 0.9935871387338658 1.0610727571780336 1.0217089023790542 1.0462980944246623 0.9874320619757333 1.0563251864820502 1.0378870761724541 1.0723729684160652 1.0691569600061845 1.0 12.64552126548977 FS(ph)PVTPK ddPTM_A549_MK2206_60min_R1 2 FSPVTPK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(0.999)PVT(0.001)PK;FS(0.999)PVT(0.001)PK 108.3 0.0089992 300230000.0 22370.8 24126.0 23480.0 21658.5 32607.0 24607.0 24313.0 27201.0 32959.0 32477.0 30846.0 True False 26146.44412645133 25353.91034952223 26809.817066113934 26964.83347228702 27810.553494231717 27210.896407195367 28730.357387430475 31056.825049568808 25493.839124707818 25140.423143743912 23186.086893708896 1.127678173825255 1.0934967364588601 1.1562889930076243 1.16297474411706 1.1994500676945872 1.1735872694662646 1.2391205777472485 1.3394595298439724 1.0995317684082813 1.084289179929076 1.0 14.500971737032229 -9.271275217642085 2.054022130340272 1.0325331091821395 1.1830492416799323 0.40180087010909904 0.06597589442401217 0.18271565110937213 1.5873465563909448 0.014605308504869659 0.013212076476428273 5.354572242833088e-10 9.271275217642085 0.15051613249779283 FS(ph)PVTPK ddPTM_A549_PD325901_60min_R1 2 FSPVTPK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(0.998)PVT(0.002)PK;FS(0.999)PVT(0.001)PK 100.98 0.011073000000000001 466490000.0 26654.0 25213.0 25136.0 23384.0 31333.0 22878.5 24554.0 25126.0 24030.0 25219.0 27884.0 True False 29359.89445836227 27337.78799503118 26841.88011504702 24828.3765710828 29132.278172981867 22692.18508134249 25488.415906464365 24624.842219034308 23020.10266657599 23626.66803609853 24454.444771239512 1.200595422754884 1.117906713923136 1.097627869540319 1.01529095439873 1.1912876552913556 0.9279370394060392 1.0422815216169163 1.0069679540626986 0.9413463638990311 0.9661502543654348 1.0 14.577809088761127 -6.06941929034217 0.4449571088760403 0.9716248045446183 1.2363109205162723 0.5581628061097035 0.0596919018502344 1.4095124308850135 0.2897409913874006 0.013678755799417032 0.17270049614320618 8.522768845275742e-07 6.06941929034217 0.26468611597165403 FS(ph)TLTR ddPTM_A549_MK2206_60min_R1 2 FSTLTR 6 0 P48506;A0A0C4DGB2;B4E2I4;A0A2R8YEL6 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 FS(0.947)T(0.053)LTR;FS(0.721)T(0.279)LTR 87.323 0.038897 4005300.0 1647.85 1786.1399999999999 1672.9099999999999 1238.54 2337.3999999999996 1746.1599999999999 1922.6799999999998 1605.35 2340.56 2435.5 2560.5 True False 1925.9667939355234 1877.046896779228 1910.153793359144 1541.9823556001734 1993.5715563350564 1930.9374921928006 2272.0060684269665 1832.9132786781836 1810.4268971062875 1885.3188584717896 1924.657183795033 1.0006804381328358 0.9752629780427041 0.9924644292199137 0.8011724729905911 1.035806050615278 1.0032630789787635 1.1804731188268198 0.9523323395515304 0.9406490217320123 0.9795608663950864 1.0 10.91038578330964 -5.251370027496085 20.001123039104236 0.9799924603579433 1.0006805735931061 0.0 0.08459376505550073 692.8039797384973 1375609.5462926698 0.011252549189576343 0.17271153175508328 5.605701556352383e-06 5.251370027496085 0.02068811323516284 FS(ph)TLTR ddPTM_A549_PD325901_60min_R1 2 FSTLTR 6 0 P48506;A0A0C4DGB2;B4E2I4;A0A2R8YEL6 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 FS(0.692)T(0.307)LT(0.001)R;FS(0.906)T(0.094)LTR 75.109 0.045987 6188700.0 1773.17 1810.95 1771.99 1896.96 2034.61 2042.65 1791.5900000000001 1951.65 2283.6 1746.5 2318.59 True False 1953.180913061239 1963.5651120295786 1892.2478972414935 2014.130910891259 1891.7060126234514 2026.0153356384494 1859.769937845665 1912.7228097101936 2187.6282334329153 1636.2256919404444 2033.4181287529855 0.9605407198071196 0.965647489940377 0.9305749125006247 0.9905148785736682 0.930308422982124 0.9963594338961285 0.9146028116638205 0.9406441216707311 1.0758378724470705 0.8046676031868943 1.0 10.989691189590554 -8.74963750984182 24.9999245782028 1.0358123294049673 0.953852869702726 0.0 0.07535277843005316 118.8019976446938 251658.35338870843 0.005728890066067067 0.006470107737551301 1.779764296221869e-09 8.74963750984182 -0.08195945970224128 FS(ph)TYTSDKDENKLSEASGGR ddPTM_A549_MK2206_60min_R1 1 FSTYTSDKDENKLSEASGGR 20 2 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FS(0.273)T(0.273)Y(0.002)T(0.234)S(0.217)DKDENKLSEASGGR 41.763000000000005 0.016163999999999998 12855000.0 2223.3 2262.4 2441.0 1809.7 2600.5 2910.4 2226.4 1960.4 3752.5 3315.5 3892.5 True False 2598.538685533786 2377.5464965082924 2787.170505041913 2253.0765812405207 2217.96989486152 3218.3765962328353 2630.908061011607 2238.2927034732074 2902.564741511153 2566.5262472852464 2925.8848224652093 0.8881206346818474 0.8125905976384561 0.9525906432275684 0.7700496492347184 0.7580509929275909 1.0999669472707359 0.8991837412092425 0.7649968605351082 0.9920297337834345 0.8771795210731553 1.0 11.514657263527145 -8.869792997382737 11.306375364180793 0.9964668323054456 0.8709976127041696 0.09759898951538337 0.10091051348377722 0.3694834348313964 36.33639398729233 0.01606304103828805 0.017090975240085033 1.349606007056416e-09 8.869792997382737 -0.125469219601276 FSASS(ph)GGGGSR ddPTM_A549_MK2206_60min_R1 2 FSASSGGGGSR 11 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5;H0YD99;H0YEN8;H0YDC0;H0YCF8;H0YEC5;H0YD77 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FSAS(0.034)S(0.966)GGGGSR;FSAS(0.063)S(0.937)GGGGSR 157.74 3.0345e-13 93736000.0 29566.0 33870.0 31767.0 28079.0 37607.0 30095.0 28923.0 29858.0 40993.0 47176.0 48384.0 True False 34556.01798070073 35593.83832953319 36272.03827679904 34958.35626051423 32075.060117691675 33279.63292455578 34177.93471462394 34090.462936290045 31708.150952369524 36518.90883484504 36368.91746953285 0.9501525034295885 0.9786884187397394 0.9973362090632759 0.9612151994845521 0.8819360692976841 0.9150570113183863 0.9397567233958957 0.9373515987889516 0.8718475324136946 1.004124163592107 1.0 15.150418363781817 -6.534129485359521 24.914701275245672 0.9324236356713715 0.9763142770076891 0.16290388366470843 0.039815077745619105 310.895764401845 688475.6864073514 0.0069239767701271444 0.014423428399720377 2.923280668673357e-07 6.534129485359521 0.04389064133631759 FSASS(ph)GGGGSR ddPTM_A549_PD325901_60min_R1 2 FSASSGGGGSR 11 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5;H0YD99;H0YEN8;H0YDC0;H0YCF8;H0YEC5;H0YD77 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FSAS(0.064)S(0.936)GGGGSR;FSAS(0.041)S(0.959)GGGGSR 188.27 7.7205e-19 142626000.0 23194.0 22830.2 23427.5 22367.4 26367.0 26282.0 24495.9 25457.0 24203.0 26582.0 26328.0 True False 25548.637805479648 24754.181076593864 25017.431031001914 23748.983497948902 24515.072881211923 26067.968105769338 25428.1048791708 24949.240164369836 23185.83207819969 24903.607983487494 23089.822906942845 1.1064891189701358 1.0720818941036818 1.0834830189832014 1.0285476676743093 1.0617263276558315 1.1289808592655337 1.1012689435363692 1.0805297322946503 1.0041580730889008 1.0785534425211751 1.0 14.494969487600624 -8.762536547256666 6.6930872307986204 1.0018424520979943 1.0823107529498384 0.2742155098940533 0.03361602598815678 0.05973521899116087 12.517041936448972 0.004403102663404923 0.0048251009659123585 1.7276805845950295e-09 8.762536547256666 0.08046830085184409 FSAVKDELPQS(ph)PGLIHGR ddPTM_A549_MK2206_60min_R1 2 FSAVKDELPQSPGLIHGR 18 1 Q9HCH5-13;Q9HCH5;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;A0A0U1RR07 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 FSAVKDELPQS(1)PGLIHGR;FSAVKDELPQS(1)PGLIHGR 105.32 2.2489e-09 11072400.0 1723.37 1737.8200000000002 2237.64 1742.3200000000002 2123.1 1815.82 1602.22 2044.47 2570.3999999999996 2789.4 2194.8 True False 2014.2327236487934 1826.2676151706346 2554.9709991405116 2169.1884782157176 1810.7948024535638 2007.9688671562365 1893.3226345283942 2334.2798834267837 1988.208504085347 2159.2726026775645 1649.7705866015772 1.2209168595968152 1.1069827708182325 1.5486825985930504 1.3148424973948096 1.097604004556589 1.2171200550329395 1.1476278277142271 1.4149118079715872 1.2051424120616252 1.3088320401720395 1.0 10.688049705143255 -10.236324864983043 0.6310232965290304 0.9916554640087335 1.2586312676589342 0.0 0.15643979755828447 0.7049694303987378 0.5133219318409566 0.09512016656204132 0.028575354683235327 5.8033015118187825e-11 10.236324864983043 0.2669758036502007 FSAVKDELPQS(ph)PGLIHGR ddPTM_A549_PD325901_60min_R1 2 FSAVKDELPQSPGLIHGR 18 1 Q9HCH5-13;Q9HCH5;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;A0A0U1RR07 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 FSAVKDELPQS(1)PGLIHGR;FSAVKDELPQS(1)PGLIHGR 116.39 2.1056000000000002e-10 16306100.0 3186.7 2812.0 3130.7 3596.5 4015.7999999999997 3529.5 3202.5 3763.5 3808.3999999999996 3433.6 3874.4 True False 3510.21143807545 3048.9771087148565 3343.1681284284577 3818.6476367558703 3733.744061757911 3500.756922201997 3324.3728899752405 3688.4340400913643 3648.3461920677496 3216.8019100181596 3397.873361845157 1.033061289891419 0.8973192300077839 0.9839001553056725 1.1238345959668783 1.0988473271794819 1.0302788095377902 0.9783686841613181 1.085512509532852 1.0737145866103077 0.9467103589379594 1.0 11.730416369190536 -6.015739031293989 24.569107633005547 1.0444505265682429 0.9590451127619715 0.22877185075616435 0.058144358176244526 479.0380170175538 747797.2232654413 0.007275521123680935 0.019937927375814613 9.644083650870114e-07 6.015739031293989 -0.08540541380627142 FSCPPNFTAKPPAS(ph)ESPR ddPTM_A549_PD325901_60min_R1 1 FSCPPNFTAKPPASESPR 18 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 FS(0.001)CPPNFT(0.011)AKPPAS(0.548)ES(0.44)PR 42.863 0.01948 3992400.0 3078.4 2820.7 3472.8 3377.4 4206.7 4077.2 3727.8 3906.3 2992.8 3567.2 3968.2 True False 3390.916901801698 3058.4102882475095 3708.485091642878 3586.0143273680746 3911.235904327159 4043.9966349913493 3869.6634689304333 3828.3857820669336 2867.0230237423466 3341.9663832178394 3480.1365564923476 0.9743631741909073 0.8788190459198822 1.0656148204082787 1.030423452975777 1.1238742620689917 1.1620224003702084 1.1119286286945855 1.10006768985111 0.823824863536975 0.9602974851613952 1.0 11.764928201514554 -8.748477709653125 24.9979297293172 0.9168061809309852 1.057134107488922 0.31362301533528925 0.08377050682848544 214.07850255076752 412872.3531617833 0.017096834027915765 0.019326744749959 1.784523577612814e-09 8.748477709653125 0.1403279265579368 FSDEEDGRDS(ph)DEEGAEGHR ddPTM_A549_MK2206_60min_R1 1 FSDEEDGRDSDEEGAEGHR 19 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 FS(0.004)DEEDGRDS(0.996)DEEGAEGHR 77.28699999999999 0.0001604 3897200.0 546.99 542.57 400.14 376.31 483.49 350.21 247.26 336.59 433.7 522.29 453.45 True False 639.3085393784585 570.1844954961568 456.8858688600864 468.5059668931979 412.36926147533 387.2689897494163 292.18394141471884 384.30266326364347 335.4676424765855 404.3043262538411 340.8458504166602 1.8756529926855454 1.672851509851583 1.3404472089115225 1.374539154050085 1.209840932407531 1.136199807848642 0.8572319160040952 1.1274969690663987 0.9842209962846835 1.1861793997480308 1.0 8.412975609022247 -5.180276318030473 0.47973249578977273 0.9850684121643388 2.6040266181533074 0.8754117589426881 0.1017992011685353 0.7671696212737626 0.11014812631927219 0.015587205165209254 0.7113368330798219 6.602732182896875e-06 5.180276318030473 1.6189582059889687 up FSDEEDGRDS(ph)DEEGAEGHR ddPTM_A549_PD325901_60min_R1 1 FSDEEDGRDSDEEGAEGHR 19 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 FS(0.004)DEEDGRDS(0.996)DEEGAEGHR 74.561 0.00020557 4120100.0 530.76 593.54 413.69 458.99 586.87 670.8 514.08 550.02 587.4 750.7 658.41 True False 584.6423644751393 643.5596988288112 441.7654911200592 487.3407698580781 545.6502757915891 665.3372272030308 533.6435957153701 539.0494196176572 562.7136207385244 703.3006738847366 577.4297440048704 1.012490905681866 1.114524676829573 0.7650549624550222 0.8439827960333952 0.944963922376307 1.1522392708565061 0.9241706047461058 0.9335324776984654 0.9745144350128561 1.217984839171715 1.0 9.173501613980235 -7.019140246209072 24.948543397084148 0.9905198607133845 0.9297928843606168 0.08382075265238942 0.12111454697439354 1616.789544616297 2107421.6004922283 0.014698673324759994 0.025727522454564167 9.568850156371524e-08 7.019140246209072 -0.06072697635276769 FSDS(ph)EGEETVPEPR ddPTM_A549_MK2206_60min_R1 2 FSDSEGEETVPEPR 14 0 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 FS(0.036)DS(0.964)EGEETVPEPR;FS(0.006)DS(0.994)EGEETVPEPR 272.72 3.886499999999999e-84 14995400.0 2690.1000000000004 3364.6 2856.8 2811.4 4155.9 3264.1 2970.0 3576.0 4580.1 4704.700000000001 4965.799999999999 True False 3144.123113369514 3535.843768631458 3261.937197379655 3500.193126208543 3544.572615287439 3609.5048954657764 3509.610555697302 4082.9089510407002 3542.7146629167833 3641.905002443944 3732.65481089216 0.8423289247628076 0.9472731735904447 0.8738920051918767 0.9377221585008941 0.9496116825333316 0.9670074192054879 0.9402451428018475 1.093835127514731 0.9491139262540116 0.9756875968858942 1.0 11.865986381666175 -6.56287165091837 0.800966799714016 0.9835436061347962 0.8784333453064209 0.48576361900293574 0.044158901768703684 0.5731347108865322 0.6195014848250117 0.007377752723445564 0.03609307851013759 2.7360772125420673e-07 6.56287165091837 -0.10511026082837527 FSDS(ph)EGEETVPEPR ddPTM_A549_PD325901_60min_R1 2 FSDSEGEETVPEPR 14 0 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 FS(0.001)DS(0.999)EGEETVPEPR;FS(0.004)DS(0.996)EGEET(0.001)VPEPR 182.57 5.5983e-26 25203000.0 2196.3 2268.6000000000004 1856.5 2293.0 2914.7 2640.8 2547.6000000000004 2443.4 2087.2 1943.3200000000002 2739.8999999999996 True False 2419.266759169395 2459.782883652394 1982.4932540414068 2434.63340221916 2709.9815271691264 2619.2942003544504 2644.550312100213 2394.6644701897817 1999.4822424335168 1820.6184435509335 2402.9096696571205 1.006807201168993 1.0236684777265843 0.8250386100965234 1.013202216031103 1.1277916774773407 1.090051046624739 1.1005616838179244 0.9965686602490907 0.8321087836476307 0.7576724445953575 1.0 11.230566700259635 -8.539868576548201 23.993027299569796 0.9203822609570963 1.0263659027982288 0.31478892312638873 0.09608209326077961 181.9003642998821 256878.15701518313 0.016587844410965998 0.018811563858601017 2.8849043825818043e-09 8.539868576548201 0.10598364184113251 FSDS(ph)ER ddPTM_A549_PD325901_60min_R1 1 FSDSER 6 0 Q5TEA3 Q5TEA3 C20orf194 Uncharacterized protein C20orf194 1 FS(0.29)DS(0.71)ER 70.91199999999999 0.05019 1960900.0 1343.2 695.26 722.19 703.37 886.19 895.68 789.14 712.12 860.69 919.89 693.86 True False 1479.5606751884225 753.8520002151823 771.202156281263 746.8155674308293 823.9470715895313 888.3858790417576 819.1711545339776 697.9162079526675 824.518192430099 861.80798841059 608.5196187409358 2.4314099818995545 1.2388294099292116 1.2673414833804821 1.2272662120180058 1.354018911163995 1.4599132906838437 1.3461704919701565 1.1469083106912783 1.3549574525404413 1.4162369821267609 1.0 9.24915996611388 -5.261298075938103 7.079117914216462 1.2230863687046902 2.4484960509267166 0.8535508814022525 0.13505040031505428 0.0321035582479566 12.594569671063438 0.022163851745268023 0.1867542351093738 5.479007867601258e-06 5.261298075938103 1.2254096822220264 FSDSTSKT(ph)PPQEELPTR ddPTM_A549_MK2206_60min_R1 2 FSDSTSKTPPQEELPTR 17 1 F6Q6H0;I6L8A6;Q99708-3;Q99708;Q99708-2 F6Q6H0 RBBP8 DNA endonuclease RBBP8 1 FS(0.059)DS(0.047)T(0.047)S(0.047)KT(0.8)PPQEELPTR;FS(0.002)DS(0.119)T(0.111)S(0.111)KT(0.653)PPQEELPT(0.002)R 64.87 0.0010217 10307000.0 2514.7 3201.4 2865.6 2473.5 3147.5 2642.4 2931.0 1914.3 3607.3 3668.2 3893.9 True False 2939.1198814877935 3364.3375857150145 3271.985169704263 3079.507611039636 2684.506919468037 2922.0170141168396 3463.524760521477 2185.6578872978785 2790.2523096743985 2839.551072324457 2926.937163827175 1.004162275094655 1.149439635156331 1.1178870561833019 1.0521263145304303 0.9171727198809613 0.9983190108174711 1.183327337301863 0.7467389168136352 0.9533010630217795 0.9701441860171488 1.0 11.515176058626038 -6.566431803323066 5.9561857885049765 0.9736548671500211 1.094864194774899 0.23118856926683173 0.10097085303651297 0.2028279003872885 17.672008351049175 0.013741179105348594 0.02915032403762363 2.713739753589324e-07 6.566431803323066 0.1212093276248778 FSDSTSKT(ph)PPQEELPTR ddPTM_A549_PD325901_60min_R1 2 FSDSTSKTPPQEELPTR 17 1 F6Q6H0;I6L8A6;Q99708-3;Q99708;Q99708-2 F6Q6H0 RBBP8 DNA endonuclease RBBP8 1 FS(0.01)DS(0.112)T(0.142)S(0.112)KT(0.624)PPQEELPTR;FS(0.071)DS(0.053)T(0.046)S(0.023)KT(0.808)PPQEELPTR 111.38 1.8087999999999998e-09 37259000.0 14775.0 15114.3 15587.6 15372.2 16830.800000000003 17207.7 15819.099999999999 15797.8 17407.6 17541.1 18917.0 True False 16274.947123219874 16388.03510464047 16645.46827185341 16321.705881200773 15648.662671107873 17067.566196394746 16421.104507043663 15482.700485865655 16676.019108559638 16433.551952417147 16590.328924743142 0.9809900211771629 0.9878065214366565 1.003323583719189 0.9838084558322566 0.9432400491933075 1.0287659921522017 0.9897998153944317 0.9332364991735909 1.0051650684085411 0.9905500986124407 1.0 14.018054869423187 FSEGVLQS(ph)PSQDQEK ddPTM_A549_MK2206_60min_R1 2 FSEGVLQSPSQDQEK 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 FSEGVLQS(0.815)PS(0.185)QDQEK;FSEGVLQS(0.5)PS(0.5)QDQEK 228.73 2.7721e-54 39896000.0 7257.299999999999 9048.6 7857.6 7021.4 11278.900000000001 9111.599999999999 8267.8 8596.8 12340.1 12858.900000000001 11498.099999999999 True False 8482.154816050175 9509.135090304522 8971.925833845695 8741.643315202618 9619.78875106849 10075.783464209417 9769.95223986335 9815.422726595823 9545.087053090412 9954.06555910609 8642.80443858374 0.9814123270201067 1.1002372155793847 1.038080393650083 1.0114359728166051 1.1130401965504666 1.1658002371578007 1.1304145904595189 1.1356756705933562 1.1043969721770686 1.1517170878781586 1.0 13.077283802276103 -5.249040093877888 23.482777138836845 1.0712132088738746 0.9814121938972499 0.1420992718856151 0.05762202030565374 1310.0489562788362 2480968.408708251 0.00876651956623164 0.1962379508952197 5.635856234442846e-06 5.249040093877888 -0.08980101497662474 FSEGVLQS(ph)PSQDQEK ddPTM_A549_PD325901_60min_R1 1 FSEGVLQSPSQDQEK 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 FSEGVLQS(0.93)PS(0.07)QDQEK 221.59 6.115800000000001e-54 37113000.0 3719.6 3039.3 3120.5 3395.5 3831.2 4066.4 3804.9 3803.5 3573.8 3804.1 3578.6 True False 4097.211053775203 3295.4324774242787 3332.275895090877 3605.2323232599906 3562.109728922481 4033.284586610623 3949.697551621173 3727.6362087119705 3423.6056142242724 3563.9084767882327 3138.4548866144637 1.3054866811212875 1.0500174756308671 1.061756824768475 1.148728420037623 1.1349883486026544 1.2851179106676396 1.258484730325953 1.1877297407110645 1.0908570420514818 1.1355614802648055 1.0 11.615838755865902 -9.253623295800848 1.3669012900948516 1.0257977809633 1.1732106491683114 0.17468770147563195 0.08654752317106246 0.2936679945111694 1.1372609909121298 0.01921681561819593 0.016783640517433647 5.576692578799828e-10 9.253623295800848 0.14741286820501132 FSEGVLQSPS(ph)QDQEK ddPTM_A549_PD325901_60min_R1 1 FSEGVLQSPSQDQEK 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 FSEGVLQS(0.31)PS(0.69)QDQEK 196.95 1.9475999999999998e-38 31711000.0 3784.6 3065.0 4198.4 3599.2 4788.8 4400.4 4492.2 4474.5 3833.6 4251.5 5390.7 True False 4168.809805924736 3323.2983066184343 4483.328671030137 3821.514409623726 4452.451208463137 4364.564601347969 4663.15312922616 4385.252587322657 3672.4871237031107 3983.0595644344708 4727.678074462805 0.8817880025383132 0.7029451359155948 0.9483151349173806 0.8083279676478301 0.9417839240183583 0.923194120370369 0.9863516626512314 0.9275700498750526 0.7768056677844772 0.8424980511997016 1.0 12.20691608494309 -5.776089876183471 24.99946730345788 0.9029393059163344 0.7923665232204992 0.24351582907184877 0.07714788996804003 261.7849577781234 446709.5936095845 0.01265017617932767 0.03957206288394727 1.6745962865488019e-06 5.776089876183471 -0.11057278269583526 FSFRS(ph)QEDLNEPIKR ddPTM_A549_MK2206_60min_R1 4 FSFRSQEDLNEPIKR 15 2 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 FS(0.002)FRS(0.998)QEDLNEPIKR;FS(0.025)FRS(0.975)QEDLNEPIKR;FS(0.002)FRS(0.998)QEDLNEPIKR;FS(0.046)FRS(0.954)QEDLNEPIKR 115.15 2.1509e-07 83387300.0 5800.51 8373.2 6905.0 7403.56 9874.400000000001 7686.61 7185.8099999999995 6620.93 12392.7 11356.400000000001 11884.7 True False 6779.494279146132 8799.360115171165 7884.232829706851 9217.432532358436 8421.88884053858 8500.001968241231 8491.378662368765 7559.467103247734 9585.773237075353 8790.981352637657 8933.400988966547 0.7588928659442625 0.9849955382098113 0.8825566925121238 1.0317943349618686 0.942741611054992 0.9514855516660903 0.9505202635431104 0.8462025954711168 1.0730261911353287 0.9840576241338781 1.0 13.124993805564728 -2.378340168714133 0.2563685958952376 1.0271597717853422 3.368926764369617e-11 0.245873794513793 0.07333035614324354 30.85004540433184 0.4491594362530615 0.03395738832076938 13.480593391338294 0.004184656661997648 2.378340168714133 -1.027159771751653 FSFRS(ph)QEDLNEPIKR ddPTM_A549_PD325901_60min_R1 4 FSFRSQEDLNEPIKR 15 2 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 FS(0.003)FRS(0.997)QEDLNEPIKR;FS(0.002)FRS(0.998)QEDLNEPIKR;FSFRS(1)QEDLNEPIKR;FS(0.062)FRS(0.938)QEDLNEPIKR 134.06 3.5366e-10 168927000.0 9942.7 11145.199999999999 10492.800000000001 11862.099999999999 11942.9 11486.099999999999 11927.7 12175.1 12864.900000000001 12534.400000000001 13423.300000000001 True False 10952.075584571114 12084.445118082802 11204.90450633217 12594.794976216268 11104.071904768301 11392.56100980432 12381.61515058788 11932.258079318826 12324.23299189486 11742.975844865909 11772.31919730955 0.930324382223182 1.0265135455080578 0.9518009424084374 1.0698652291975472 0.9432357141068711 0.9677414296078533 1.0517566626478816 1.013586013030111 1.0468823334922353 0.997507428064782 1.0 13.523110945028433 -7.751459935510704 24.997675188916517 1.023943092669305 0.9845390526466835 0.19787314854956217 0.04013697820524893 259.9500451634195 651150.0522205926 0.005812393569557326 0.008564712375068973 1.7723115366930262e-08 7.751459935510704 -0.039404040022621434 FSFS(ph)QR ddPTM_A549_MK2206_60min_R1 1 FSFSQR 6 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 FS(0.031)FS(0.969)QR 73.616 0.046863999999999996 3029500.0 1116.5 1118.7 1062.5 959.04 1506.9 1297.8 922.61 1105.7 1570.0 1481.4 1740.7 True False 1304.9379041957775 1175.6370516459635 1213.1784766927624 1194.0048430529419 1285.2370061783593 1435.1323345900819 1090.236294542723 1262.4363610642338 1214.3975067748197 1146.7507111230175 1308.436149124005 0.9973263923267716 0.8985054810913394 0.9271973091732315 0.9125434541473999 0.9822695643488775 1.0968302393287588 0.8332361462747981 0.9648436890936039 0.9281289786955642 0.8764284844092427 1.0 10.353627808138786 -7.912029645992009 0.00567651069494607 1.9048754182973204 2.815936441290999e-07 0.0 0.07111283991309211 11220.822716904831 34.15608729425937 5677.412549195626 5782.612904954579 1.2245326068537566e-08 7.912029645992009 -1.9048751367036763 FSFYGNLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 FSFYGNLSPR 10 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 FSFYGNLS(1)PR;FSFYGNLS(1)PR 113.61 0.00010309 8143400.0 4347.0 4775.9 4915.4 4834.1 5714.8 4237.0 4613.3 4520.7 7176.299999999999 6670.700000000001 5791.4 True False 5080.667326053783 5018.972910481768 5612.477632315866 6018.4547170109945 4874.160490349783 4685.356527707024 5451.4768944775615 5161.5230690631115 5550.879508196266 5163.784236997645 4353.235545491332 1.1671014060601097 1.152929323036504 1.2892657825806686 1.382524481875174 1.1196638544858835 1.0762929041502638 1.2522816276559359 1.1856751179956082 1.2751158190705623 1.1861945403679803 1.0 12.087872368449412 -10.865967700563544 1.0248957068449294 0.9954520981757339 1.2150788991444044 0.074384913692087 0.09792126960032911 0.40438299694104096 0.7280510309637113 0.06640478316910034 0.014792985295698842 1.3615459398687027e-11 10.865967700563544 0.2196268009686705 FSFYGNLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 FSFYGNLSPR 10 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 FSFYGNLS(1)PR;FSFYGNLS(1)PR 88.021 0.00071252 10868400.0 5574.9 6633.4 6218.8 6572.5 7776.6 6836.2 7027.799999999999 7145.9 7765.8 7203.4 7749.2 True False 6140.859743975531 7192.419897919328 6640.8451646823105 6978.468397769484 7230.39844381358 6780.528253734889 7295.246774759722 7003.369418649895 7439.430432296956 6748.576094660063 6796.09752622613 0.9035861713693724 1.0583161689725302 0.9771556601498579 1.0268346460361384 1.063904456331223 0.9977090863644674 1.0734464516742699 1.03049866362628 1.0946621062437973 0.9930075412569226 1.0 12.730490840479282 -4.4674598119684665 1.5543759613793673 1.0410497719949428 2.6661492404716635e-25 0.4544153769857925 0.03792364471422709 7.875871590325892 2.70401980322248 0.005783487567156943 22.69104810276232 3.408318626818794e-05 4.4674598119684665 -1.0410497719949428 FSGEEGEIEDDES(ph)GTENR ddPTM_A549_MK2206_60min_R1 2 FSGEEGEIEDDESGTENR 18 0 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.982)GT(0.018)ENR;FSGEEGEIEDDES(0.847)GT(0.153)ENR 159.81 9.830799999999998e-23 9717100.0 1718.96 1965.3200000000002 1186.22 1245.97 2893.7 2136.5 1685.77 2343.6000000000004 2524.2 1913.73 2107.64 True False 2009.078423462943 2065.346393439569 1354.4438330564603 1551.2327059337188 2468.0405632612114 2362.58301190608 1992.0525880396772 2675.812476973988 1952.4727303191064 1481.4170638567914 1584.2548200952017 1.2681535810900753 1.3036705757445368 0.8549406420458727 0.9791560588974578 1.5578558019554587 1.4912897735505117 1.2574066764840077 1.6890038414484305 1.2324234116591026 0.9350876166296085 1.0 10.629588689600109 -10.044059706974638 1.1178678658724894 1.031608280499722 1.2889512613360365 0.21917996884156132 0.22878878140179576 0.5927687586313471 1.4888755697499128 0.08205764074222935 0.04477671745577636 9.035252481799415e-11 10.044059706974638 0.25734298083631457 FSGEEGEIEDDES(ph)GTENR ddPTM_A549_PD325901_60min_R1 2 FSGEEGEIEDDESGTENR 18 0 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.725)GT(0.275)ENR;FSGEEGEIEDDES(0.993)GT(0.007)ENR 235.26 2.9270999999999993e-74 11029000.0 2511.2 2877.26 2767.8 2796.3 3294.1 2275.15 2521.7 2607.05 2507.1000000000004 2782.3 3087.0 True False 2766.135175352266 3119.736797944847 2955.6395521334803 2969.021100141927 3062.733780028071 2256.621932723578 2617.6646734271876 2555.0503425588404 2401.7353056751 2606.625103169711 2707.318570105309 1.0217250403762677 1.1523345765044177 1.0917221138177737 1.0966648450338958 1.1312794193662024 0.833526559320206 0.9668846150327134 0.943756811914253 0.88712696473754 0.9628069381832367 1.0 11.4026489440914 -7.243545224676187 24.904445131500168 0.9398214725698558 1.1012166491267965 0.7221000942919222 0.05127431829570265 367.18076893965093 511029.13282296056 0.008286941133560466 0.014334343155201396 5.7076163757585166e-08 7.243545224676187 0.1613951765569407 FSGEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A549_MK2206_60min_R1 2 FSGEEGEIEDDESGTENREEKDNIQPTTE 29 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.935)GT(0.065)ENREEKDNIQPTTE;FSGEEGEIEDDES(0.998)GT(0.002)ENREEKDNIQPTTE 287.01 8.539999999999998e-169 446320000.0 13832.8 14570.2 14486.9 13245.3 20375.1 17210.7 16308.1 17766.0 20676.6 20964.0 20747.1 True False 16167.438460509946 15311.760945644079 16541.360257882712 16490.399094604116 17377.949780731768 19031.92485046195 19271.070674534403 20284.38490609313 15993.383113745378 16228.217839869674 15595.022479169676 1.0367050436833194 0.9818364139003999 1.0606820400532966 1.0574142561596431 1.114326690066882 1.2203845730830434 1.2357193264886175 1.3006960992321142 1.0255440885133569 1.040602401281932 1.0 13.928798011810295 -4.112267109679734 12.803777004196892 1.0655021517680177 1.066600872538476 0.0 0.10663767558887191 0.0 0.0 0.01609317264720629 0.0 7.72205499604755e-05 4.112267109679734 0.0010987207704582502 FSGEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A549_PD325901_60min_R1 2 FSGEEGEIEDDESGTENREEKDNIQPTTE 29 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.984)GT(0.016)ENREEKDNIQPTTE;FSGEEGEIEDDES(0.988)GT(0.012)ENREEKDNIQPTTE 266.11 1.2434999999999997e-152 612700000.0 11370.1 11309.5 11904.5 12189.2 15232.9 11321.8 12652.5 12083.7 12350.7 13152.9 12995.0 True False 12524.384181774773 12262.591255693704 12712.410957573888 12942.099200318271 14162.993654652131 11229.59901453083 13133.997811213663 11842.681124020728 11831.643029716188 12322.423649312044 11396.697382092158 1.0989485604359883 1.0759776139148998 1.1154469168891976 1.1356008470185786 1.2427278868443683 0.9853380008296182 1.152438936551159 1.0391327177493852 1.0381641832753643 1.0812275904311102 1.0 13.476328189835838 -8.497972899937027 0.8699110031361995 1.0113790422674083 1.120380072202951 0.20916360829444602 0.06263991310196475 0.3965606262149625 0.5964746030197812 0.012582323494268632 0.014933402571579775 3.177072314415558e-09 8.497972899937027 0.10900102993554284 FSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_A549_MK2206_60min_R1 2 FSGFSAKPNNSGEAPSSPTPK 21 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 FSGFSAKPNNSGEAPS(0.111)S(0.875)PT(0.015)PK;FSGFSAKPNNSGEAPS(0.086)S(0.905)PT(0.009)PK 208.89 1.4007999999999998e-67 121276000.0 21842.6 22737.8 22071.2 20185.8 31490.0 24138.0 23391.2 24185.0 34172.0 31747.0 30520.0 True False 25529.09687970148 23895.05689900384 25201.228042147122 25131.321906174988 26857.862714550745 26692.26713849237 27641.078259402955 27613.297813456167 26432.096561470775 24575.33065075092 22941.041690851165 1.112813324857974 1.041585522619626 1.0985215223333697 1.0954743138886018 1.1707342271759873 1.1635159160683268 1.204874592526727 1.2036636428967515 1.1521750806987912 1.0712386552416886 1.0 14.485643281282638 -10.635498945455586 0.9763662955547272 1.0023304272094111 1.1379329299043994 0.35203392574279957 0.050762304454755415 0.36780863616922466 0.6403478804632234 0.03322375630043622 0.009586524777542474 2.314733806594697e-11 10.635498945455586 0.1356025026949883 FSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_A549_PD325901_60min_R1 2 FSGFSAKPNNSGEAPSSPTPK 21 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 FSGFSAKPNNSGEAPS(0.112)S(0.88)PT(0.008)PK;FSGFSAKPNNSGEAPS(0.493)S(0.495)PT(0.012)PK 231.17 1.0761999999999998e-76 233580000.0 37558.0 34478.0 37175.0 35575.0 42753.0 39844.0 43229.0 44727.0 42164.0 39029.0 44892.0 True False 41370.860511261715 37383.58206055152 39697.91905143511 37772.386953312984 39750.17676984309 39519.52367423609 44874.10325081647 43834.8848973473 40391.99370925969 36564.702279269186 39370.568593834636 1.0508067825502607 0.9495311700020945 1.008314598170465 0.9594066914041998 1.0096419277030177 1.003783411967913 1.1397880410049166 1.1133922232510447 1.0259438751307495 0.9287318823481547 1.0 15.264829927748258 -7.540047825758916 24.999850735193174 1.0322498673611806 0.9931890331988893 0.12028951000385657 0.057848449766282346 440.40169454734104 641266.0127074656 0.008339681763439934 0.012371211114128693 2.8837139227595486e-08 7.540047825758916 -0.039060834162291336 FSGFSAKPNNSGEAPSSPTPK ddPTM_A549_MK2206_60min_R1 2 FSGFSAKPNNSGEAPSSPTPK 21 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 0 ; 152.51 2.0343000000000002e-22 10654000.0 4724.1 5383.200000000001 4497.799999999999 4136.4 6891.700000000001 5396.299999999999 4346.8 5019.0 7236.0 6130.6 6535.5 False True 5521.412586843952 5657.181886493743 5135.655672911723 5149.818185690053 5877.940059379786 5967.332884225969 5136.557294109439 5730.458620042863 5597.057553517572 4745.693202113386 4912.554979376075 1.1239390927987551 1.1515762999587316 1.0454143911818332 1.048297313172078 1.1965138474900736 1.2147106565276258 1.0455979252494418 1.1664925164401247 1.1393373869636434 0.9660336061452321 1.0 12.262257838197069 -10.69174260442604 0.8713336268397508 0.9970720222616771 1.1257907166174868 0.47028883722823833 0.05732242044935075 0.5156077243930053 0.6716887048374818 0.04340071377900471 0.010440951548169637 2.033561895575093e-11 10.69174260442604 0.12871869435580963 FSGFSAKPNNSGEAPSSPTPK ddPTM_A549_PD325901_60min_R1 1 FSGFSAKPNNSGEAPSSPTPK 21 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 0 106.03 7.846799999999999e-10 3888300.0 2663.6 2369.4 2494.4 1642.0 3404.7 2688.5 2111.5 2623.1 2511.2 2387.5 2690.1 False True 2934.0067111613166 2569.0776534100223 2663.684984045723 1743.4226107474324 3165.565617577358 2666.6057473693336 2191.854287957135 2570.780212717858 2405.662996933233 2236.7528425467003 2359.2347539489115 1.2436264370259662 1.0889453239487397 1.1290461788879718 0.7389780130312482 1.341776443517883 1.1302841918999122 0.9290530687072945 1.0896669813865956 1.019679365483494 0.9480840508994708 1.0 11.20410326470932 -5.276313986713749 1.5986066981286746 1.02718561183949 1.3146131988150793 0.15438655993651706 0.14205288071841995 1.318213632026164 3.1964856402321153 0.018398734377604694 0.5822863577899712 5.292806456129791e-06 5.276313986713749 0.28742758697558934 FSGWYDADLS(ph)PAGHEEAK ddPTM_A549_MK2206_60min_R1 2 FSGWYDADLSPAGHEEAK 18 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 1 FSGWYDADLS(1)PAGHEEAK;FS(0.003)GWY(0.002)DADLS(0.995)PAGHEEAK 88.755 2.0979e-06 9132700.0 2005.56 1914.69 1574.56 1548.86 2642.2 2240.8999999999996 1575.3600000000001 1814.52 2677.0 2563.1000000000004 2628.3 True False 2344.0494967656823 2012.1395426977845 1797.8562844812775 1928.330769530968 2253.535880101176 2478.030550610967 1861.582520209866 2071.7337667344423 2070.6637742905664 1984.0939298497392 1975.6205726102282 1.1864876936711986 1.018484809580266 0.9100210381520348 0.9760633171496184 1.1406724101499717 1.2543048928352396 0.942277351237696 1.048649622025968 1.0481080238776646 1.0042889598119116 1.0 10.948090181698321 -4.249931483372208 12.745526280026791 1.0380485481623145 1.0549515980950548 0.0 0.10086971589448333 0.0 0.0 0.012822557929285447 0.0 5.6243005017388926e-05 4.249931483372208 0.016903049932740277 FSGWYDADLS(ph)PAGHEEAK ddPTM_A549_PD325901_60min_R1 1 FSGWYDADLSPAGHEEAK 18 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 1 FSGWYDADLS(1)PAGHEEAK 184.7 3.1962e-40 7682200.0 2671.5 2085.4 2329.5 2732.5 2599.1 3217.5 2454.5 2533.6 3426.9 3112.4 3340.3 True False 2942.708713345643 2261.1439767119364 2487.59387842147 2901.28031904224 2416.5481824082326 3191.2977467587266 2547.9073406539364 2483.065360429251 3282.8793103657636 2915.8825328344938 2929.464275906305 1.004521112460141 0.7718626218824237 0.8491634115087029 0.9903791430071817 0.8249112994083573 1.089379301535062 0.8697519753387933 0.8476175595829893 1.1206415239011989 0.9953637451108328 1.0 11.516421141405331 -8.759914561038956 24.999971768131218 1.0569696100946357 0.9046068982540028 0.2845129799683357 0.09248321850382357 31.8912077336158 522867.79536905733 0.015673174369268083 0.017311642083259717 1.7381427407683449e-09 8.759914561038956 -0.152362711840633 FSGWYDADLS(ph)PAGHEEAKR ddPTM_A549_MK2206_60min_R1 1 FSGWYDADLSPAGHEEAKR 19 1 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 1 FSGWYDADLS(1)PAGHEEAKR 69.133 0.00028835 3153100.0 480.29 273.75 188.02 309.7 349.99 286.72 493.25 322.32 505.64 447.38 766.27 True False 561.3512100368922 287.68270571921204 214.68406323555126 385.57651390296127 298.50693462894935 317.0605200906677 582.8671402685839 368.0098470636013 391.1133473411589 346.31654728109567 575.9840110238702 0.9745951264151124 0.4994630062869745 0.37272573392085745 0.6694222522211334 0.518255592022985 0.5504675720547526 1.011950208882497 0.6389237201383878 0.6790350771124968 0.6012606958750171 1.0 9.169884953635481 -11.475311164713727 0.268292384695537 1.2944109373944825 0.5903714930704875 0.0 0.21642167781393554 5.804460011426297 0.37982159320947595 1.321456656807597 0.10217471254793814 3.3472552799403452e-12 11.475311164713727 -0.704039444323995 FSGWYDADLS(ph)PAGHEEAKR ddPTM_A549_PD325901_60min_R1 2 FSGWYDADLSPAGHEEAKR 19 1 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 1 FSGWYDADLS(1)PAGHEEAKR;FSGWYDADLS(1)PAGHEEAKR 106.35 3.1102e-10 10340500.0 1865.43 1540.13 1507.04 1845.9 1452.94 1989.62 1944.8899999999999 1795.47 1850.4299999999998 2120.1000000000004 2301.3999999999996 True False 2054.807080343016 1669.9221601867048 1609.3167969677152 1959.9170506569342 1350.89050677089 1973.4171943764093 2018.903853234645 1759.6579423310334 1772.662862143662 1986.2365241814716 2018.3423897765958 1.0180666524922246 0.8273730803283299 0.7973457848972024 0.9710528107542108 0.6693069092803505 0.9777415389837999 1.0002781804816137 0.871833218805757 0.8782765853418323 0.9840929538230241 1.0 10.978955217348464 FSIPS(ph)PTFSK ddPTM_A549_MK2206_60min_R1 1 FSIPSPTFSK 10 0 Q8IZQ8-2;Q8IZQ8;Q8IZQ8-3 Q8IZQ8-2 MYOCD Myocardin 1 FS(0.022)IPS(0.964)PT(0.006)FS(0.008)K 56.093999999999994 0.018580000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FSIPS(ph)PTFSK ddPTM_A549_PD325901_60min_R1 1 FSIPSPTFSK 10 0 Q8IZQ8-2;Q8IZQ8;Q8IZQ8-3 Q8IZQ8-2 MYOCD Myocardin 1 FS(0.019)IPS(0.748)PT(0.177)FS(0.056)K 63.408 0.0086951 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FSKEEPVS(ph)S(ph)GPEEAVGK ddPTM_A549_PD325901_60min_R1 2 FSKEEPVSSGPEEAVGK 17 1 O00567 O00567 NOP56 Nucleolar protein 56 2 FS(0.002)KEEPVS(0.999)S(0.999)GPEEAVGK;FS(0.003)KEEPVS(0.998)S(0.998)GPEEAVGK 57.52 0.0022264 13031400.0 11810.6 12830.8 13064.1 14320.099999999999 15592.6 14542.1 14287.9 15444.699999999999 14380.9 14743.1 13965.1 True False 13009.603417495817 13912.096545696513 13950.708386815168 15204.620053693232 14497.429567549765 14423.673959017891 14831.633853138877 15136.64334236724 13776.520783926873 13812.218149926815 12247.481232062722 1.0622268506472932 1.135914910347116 1.1390675456022388 1.241448732649535 1.1837070245592127 1.177684920329423 1.2109946177595352 1.2358984721479687 1.12484522514403 1.1277598951340104 1.0 13.580197460398155 -9.88907479950944 0.8588310572898645 1.0136037905924404 1.1732406707564227 0.2438342919743708 0.06036232070304503 0.2674041720230117 0.40538653893892707 0.020736977893020717 0.010819252525594937 1.290996903181874e-10 9.88907479950944 0.15963688016398225 FSKEEPVS(ph)SGPEEAVGK ddPTM_A549_PD325901_60min_R1 3 FSKEEPVSSGPEEAVGK 17 1 O00567 O00567 NOP56 Nucleolar protein 56 1 FSKEEPVS(0.664)S(0.336)GPEEAVGK;FSKEEPVS(0.5)S(0.5)GPEEAVGK;FSKEEPVS(0.633)S(0.367)GPEEAVGK 144.33 2.3117e-16 306557100.0 7994.200000000001 9226.0 9035.5 8627.8 10744.2 9394.3 8637.099999999999 11282.0 9697.699999999999 9293.800000000001 10379.3 True False 8805.765298981 10003.50739864981 9648.70336487538 9160.719610844515 9989.564457477796 9317.79593547024 8965.789566902473 11056.971659442219 9290.13939366017 8706.98788191017 9102.711899803699 0.9673782270502154 1.098959025481795 1.05998118704421 1.0063725746436145 1.0974272906179996 1.0236285667429703 0.9849580724504553 1.2146898398136345 1.0205902917635472 0.95652679967801 1.0 13.15208070486774 -8.979364441007995 24.99875749041061 1.0090838724213018 1.0583372037705565 0.1472382498964433 0.06608178398943716 223.14984653473118 270336.29113578546 0.010668442460947166 0.010900751839889665 1.0486620678042583e-09 8.979364441007995 0.04925333134925469 FSKEEPVSS(ph)GPEEAVGK ddPTM_A549_MK2206_60min_R1 4 FSKEEPVSSGPEEAVGK 17 1 O00567 O00567 NOP56 Nucleolar protein 56 1 FSKEEPVS(0.027)S(0.973)GPEEAVGK;FSKEEPVS(0.106)S(0.894)GPEEAVGK;FSKEEPVS(0.126)S(0.874)GPEEAVGK;FSKEEPVS(0.202)S(0.798)GPEEAVGK 132.59 1.4876e-12 375609500.0 14219.55 17191.2 15149.6 13486.8 18832.899999999998 14711.79 14901.59 13704.46 23415.36 20604.300000000003 22787.8 True False 16619.462405380276 18066.158650447916 17298.041082827935 16791.066605445452 16062.605357791772 16268.581852904159 17609.016013694727 15647.10917314856 18111.81834664638 15949.774319692178 17128.960348714885 0.9702551741050159 1.0547142548440394 1.0098710447494108 0.9802735404606863 0.9377454924750808 0.9497705360807098 1.0280259662703848 0.9134885512372908 1.0573798980161242 0.9311583420700034 1.0 14.064149968492028 -8.811367667390407 24.999996227351566 1.0270960434015914 0.9830938010336971 0.0 0.0494564963564387 134.5468037378703 67369.36698546959 0.007385178166262951 0.007862128713648412 1.5439468032008013e-09 8.811367667390407 -0.044002242367894295 FSKEEPVSS(ph)GPEEAVGK ddPTM_A549_PD325901_60min_R1 1 FSKEEPVSSGPEEAVGK 17 1 O00567 O00567 NOP56 Nucleolar protein 56 1 FSKEEPVS(0.131)S(0.869)GPEEAVGK 195.39 1.4321999999999998e-48 269570000.0 9091.8 11636.0 10195.0 10849.0 11007.0 11641.0 10136.0 11899.0 10557.0 11115.0 10374.0 True False 10014.79284297059 12616.606556545557 10886.894007515302 11519.11809013331 10233.906292088579 11546.199555561245 10521.731026632022 11661.66511041508 10113.32600295642 10413.197003102228 9098.06376620423 1.1007608981783192 1.3867353407008804 1.1966165864824867 1.266106545979855 1.1248444235028954 1.269083164535611 1.156480246458171 1.28177438739588 1.1115910223143846 1.144550892441885 1.0 13.151343830839712 -9.348869540533393 0.6714923120758906 1.011044273577447 1.2325124935253646 0.25069908724138845 0.08912991614381757 0.31424006653356523 0.3125512358414836 0.02709232742790479 0.018270317256017243 4.4784781477905597e-10 9.348869540533393 0.22146821994791765 FSLFKS(ph)K ddPTM_A549_PD325901_60min_R1 1 FSLFKSK 7 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FSLFKS(1)K 54.416000000000004 0.011855 8139400.0 1802.2 2690.0 3359.9 2791.2 2586.5 2782.0 3242.3 3778.8 2046.1 2222.3 3876.6 True False 1985.1580172904803 2916.695740555822 3587.923018720026 2963.6060847248677 2404.833162940592 2759.34431436916 3365.6875007546387 3703.4288695887485 1960.1095325044178 2081.9835987399088 3399.8027757921077 0.5839038756676012 0.8579014527912642 1.055332692904249 0.8716994132209296 0.7073449024937333 0.8116189368444382 0.9899655135055531 1.089306972733411 0.576536246885009 0.6123836398877094 1.0 11.731235342013447 FSLS(ph)DDQR ddPTM_A549_MK2206_60min_R1 2 FSLSDDQR 8 0 Q6UB99;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 FS(0.029)LS(0.971)DDQR;FS(0.008)LS(0.992)DDQR 69.27600000000001 0.007143899999999999 4703200.0 1327.11 1161.44 1192.3899999999999 1190.51 1847.23 1670.7 1263.82 1454.78 1989.0300000000002 2141.2 1615.8600000000001 True False 1551.0937232756464 1220.5523350886644 1361.488831834054 1482.1850034440247 1575.5049140107844 1847.4923650790954 1493.439734848945 1660.9995200768976 1538.517880828228 1657.5014328720147 1214.5973665327256 1.277043542176867 1.0049028334162606 1.1209384025923381 1.2203097456691954 1.297141717430469 1.521073909745973 1.2295759697818398 1.3675309743330852 1.2666896234265588 1.3646509358106333 1.0 10.24626243094172 -10.57013895194974 0.9210606194202134 1.003842773811388 1.2537293622190717 0.0 0.16285108137496054 0.5198330616225209 0.8056986113098255 0.08273531078355548 0.024408386833958084 2.690673788645084e-11 10.57013895194974 0.24988658840768374 FSLS(ph)DDQR ddPTM_A549_PD325901_60min_R1 2 FSLSDDQR 8 0 Q6UB99;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 FS(0.061)LS(0.939)DDQR;FS(0.01)LS(0.99)DDQR 76.345 0.0046703000000000005 17379200.0 4657.1 4333.9 4190.9 4567.200000000001 5201.0 4714.5 4130.6 4610.5 4205.7 4323.200000000001 4758.200000000001 True False 5129.88536362418 4699.132962823371 4475.31967592897 4849.30557113622 4835.699702475943 4676.106675087495 4287.7922433510485 4518.539960632718 4028.949054715715 4050.232414198071 4172.971564714959 1.229312321943556 1.126087942356816 1.0724539112057583 1.1620749137473358 1.1588144389395696 1.1205699829413776 1.027515327352568 1.0828111072789839 0.9654868220965025 0.9705871107402881 1.0 12.02685937454581 -8.04084208302292 1.0930613099275812 0.9845882500543771 1.1470700478777562 0.7189828896623964 0.043244025543780235 0.17583028685289387 0.41769413013067547 0.00804573630253071 0.011730803215494806 9.102441929796078e-09 8.04084208302292 0.16248179782337913 FSLS(ph)DDQRDR ddPTM_A549_MK2206_60min_R1 3 FSLSDDQRDR 10 1 Q6UB99;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 FS(0.069)LS(0.931)DDQRDR;FS(0.108)LS(0.892)DDQRDR;FS(0.08)LS(0.92)DDQRDR 72.089 0.00064323 7870700.0 1586.6399999999999 1363.1499999999999 1312.39 1690.53 1966.55 1471.47 1581.73 2218.89 2637.5299999999997 2233.35 2152.06 True False 1854.426042376344 1432.5285125155945 1498.5066362605319 2104.7099258907765 1677.2731000730334 1627.1799787172654 1869.1098667552515 2533.424452565632 2040.1336662699293 1728.8346838710613 1617.64410816557 1.1463745535965186 0.8855646957723605 0.9263512466656577 1.3010957819872664 1.0368616258708991 1.005894912548168 1.1554518434063021 1.5661197909833016 1.2611758395877743 1.068736117631945 1.0 10.65967852539607 -7.822379001462788 7.868854335622491 1.1691542761978093 1.048121951097847 0.16012959019843032 0.17100928271497084 0.5148091887376433 58.14152051838746 0.030218469860165582 0.041887652331839546 1.505292849164872e-08 7.822379001462788 -0.12103232509996231 FSLS(ph)DDQRDR ddPTM_A549_PD325901_60min_R1 2 FSLSDDQRDR 10 1 Q6UB99;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 FS(0.107)LS(0.893)DDQRDR;FS(0.136)LS(0.864)DDQRDR 75.479 0.00042976 11433600.0 2136.99 1955.6399999999999 1925.29 2416.5 2600.2 2117.56 2079.81 2265.13 2131.6499999999996 2352.8999999999996 2148.45 True False 2353.935651631108 2120.448646119177 2055.9517571092824 2565.7617167303097 2417.5709222030277 2100.3152934347795 2158.958307665702 2219.95020518989 2042.064163512554 2204.3374924515747 1884.2042701466623 1.2492996056355838 1.1253815096991187 1.0911512035524957 1.3617216335735172 1.283072626735343 1.114696175309748 1.1458196660904783 1.1781897750486967 1.0837806685119147 1.169903670943275 1.0 10.87973966338802 -8.954955135107218 0.6355888705560333 1.0121069364435704 1.2085992909726933 0.16875870709561602 0.088512483835398 0.3942155610193182 0.3509191988295036 0.025555287376657514 0.022343795728640127 1.1092894047442278e-09 8.954955135107218 0.19649235452912284 FSLS(ph)PSLGPQASR ddPTM_A549_MK2206_60min_R1 2 FSLSPSLGPQASR 13 0 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 FS(0.044)LS(0.916)PS(0.039)LGPQASR;FS(0.008)LS(0.992)PSLGPQASR 198.29 2.0113e-30 13682000.0 5048.0 6068.700000000001 5408.0 5107.9 7214.0 5827.9 5273.3 5655.5 7586.299999999999 7265.7 7924.5 True False 5899.978988249251 6377.570908486509 6174.935719486548 6359.335729302346 6152.830156328015 6444.604509753073 6231.390351299187 6457.184444242361 5868.015162831729 5624.3733237521965 5956.627944926279 0.9904897607839885 1.070667996633696 1.0366495568598033 1.0676066707706806 1.0329384700900879 1.0819216122508442 1.046127172775151 1.084033534399684 0.985123666793722 0.9442210216508335 1.0 12.540280134834266 -8.776323306970104 24.999523170775284 0.9929750588161759 1.0522405274738384 0.5474926718356117 0.029266152579169886 119.26699822122254 200323.93804268134 0.003992648554059763 0.004259057849239259 1.6736964425266275e-09 8.776323306970104 0.05926546865766258 FSLS(ph)PSLGPQASR ddPTM_A549_PD325901_60min_R1 2 FSLSPSLGPQASR 13 0 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 FS(0.1)LS(0.899)PS(0.001)LGPQASR;FSLS(0.77)PS(0.23)LGPQASR 160.46 1.4277000000000001e-18 20229900.0 5408.0 5614.8 5355.1 5565.4 6302.0 5883.4 5920.700000000001 6496.6 5734.9 5767.9 6357.4 True False 5957.016178840815 6087.9789011423145 5718.529288832286 5909.162118059534 5859.369260719743 5835.487541035053 6146.015478431355 6367.020216515894 5493.88209665196 5403.713809644026 5575.480102879001 1.06843107121211 1.0919201196680222 1.0256568373151254 1.0598481223183327 1.0509174371717604 1.0466340895059052 1.1023293716459948 1.1419680635624845 0.9853648466640735 0.9691925556067754 1.0 12.44488032507085 -8.799967660989026 24.999858656825264 0.9930889209955484 1.0713474189226369 0.6210891023170014 0.030608031938327906 81.05515065408261 52593.933664118405 0.005318670769169562 0.005662208266884278 1.5850112132714026e-09 8.799967660989026 0.0782584979270885 FSMPGFK ddPTM_A549_MK2206_60min_R1 1 FSMPGFK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 77.748 0.047327 993540.0 683.48 853.55 737.25 701.66 860.73 648.83 709.99 857.85 1023.4 1120.2 914.81 False True 798.8347145183435 896.9920491931817 841.8031359451663 873.5667314987143 734.1177572021362 717.4887599415033 838.9859927405815 979.4528645554428 791.6015340339809 867.1460419873122 687.6374295284262 1.161709180179699 1.3044549506392178 1.22419621125404 1.270388571049421 1.0675942374247802 1.0434114391265013 1.2200993673598433 1.42437398328817 1.1511902930834526 1.2610512528120974 1.0 9.425504265604904 -9.905430644872931 0.9959044699933707 1.0203021526696459 1.2083823988956504 0.0 0.12483443485531992 0.3952955821729768 0.7991602101807398 0.03720477308081259 0.02095650253219057 1.2432811671227222e-10 9.905430644872931 0.1880802462260045 FSMPGFK ddPTM_A549_PD325901_60min_R1 2 FSMPGFK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 97.071 0.032375 4777000.0 3530.0 3760.2 4173.299999999999 3059.3 4204.0 4419.4 3892.5 4215.2 4204.7 3865.7 4304.799999999999 False True 3888.363001351347 4077.0852504230475 4456.525234091572 3248.2660128255893 3908.72554301266 4383.4098716474 4040.63121755773 4131.124529239569 4027.991081238121 3621.6190422755085 3775.3368903755527 1.029938019905967 1.0799262075966625 1.1804311412453203 0.860391034534263 1.0353315893416437 1.1610645616347524 1.0702703718596587 1.09423997094697 1.0669222901687683 0.9592836738644659 1.0 11.882389673043686 -10.539925834982995 0.9237569638026372 1.0013565376344833 1.0647247924680794 0.13023644193461625 0.0796241352032857 1.1616265256383917 1.8280546029781048 0.046365705100354836 0.014199820979021298 2.8845240548833536e-11 10.539925834982995 0.0633682548335961 FSMVS(ph)LLVNS(ph)PR ddPTM_A549_MK2206_60min_R1 1 FSMVSLLVNSPR 12 0 H0YKT0;H0YKM7;H0YLB9;A0A0C4DGL1;H0YNG5;P49641-2;P49641-1;P49641 H0YKT0 MAN2A2 Alpha-mannosidase;Alpha-mannosidase 2x 2 FS(0.09)MVS(0.923)LLVNS(0.986)PR 45.013999999999996 0.018825 216250000.0 1626.1 2115.6 1501.7 1516.7 2553.5 1730.9 1263.8 1608.0 2901.0 2305.5 2294.5 True False 1900.5459256719705 2223.275003541791 1714.6636408936683 1888.2915680872504 2177.8835326009953 1914.0626891215704 1493.416101107829 1835.9389242934683 2243.9281319450643 1784.68594876071 1724.7123250215611 1.1019495240449513 1.2890700502844712 0.9941737042275922 1.0948443637194072 1.2627517650363917 1.1097866359235544 0.8658928677216703 1.0644899428491743 1.3010448753632071 1.0347731171564505 1.0 10.752140030973019 -3.99130195093089 12.691128521696564 1.1242454945708948 1.1245620936095935 0.0 0.13137644150557348 0.0 0.0 0.01911424805077531 0.0 0.00010202299041509247 3.99130195093089 0.0003165990386986284 FSMVS(ph)LLVNS(ph)PR ddPTM_A549_PD325901_60min_R1 2 FSMVSLLVNSPR 12 0 H0YKT0;H0YKM7;H0YLB9;A0A0C4DGL1;H0YNG5;P49641-2;P49641-1;P49641 H0YKT0 MAN2A2 Alpha-mannosidase;Alpha-mannosidase 2x 2 FS(0.086)MVS(0.915)LLVNS(0.999)PR;FS(0.099)MVS(0.918)LLVNS(0.983)PR 57.567 0.016083 96083000.0 4609.3 3897.2000000000003 4189.9 5143.1 5085.8 4987.8 4532.700000000001 4633.0 4357.1 4526.0 4917.0 True False 5077.232742812681 4225.630721224588 4474.2518099154795 5460.77760617242 4728.590953057519 4947.1810104998185 4705.194378888614 4540.5911804818115 4173.9862392234 4240.227587588008 4312.240171431096 1.1774002701541801 0.9799154391306166 1.0375701797774906 1.266343568326845 1.0965509259861677 1.147241529652094 1.0911253065311315 1.0529541491133905 0.9679391855018562 0.9833004236822946 1.0 12.07422181629689 -8.471921264224862 2.4601143608184386 0.9848899364306046 1.112798140175449 0.39965759799896305 0.06985484017069304 0.21508478150192217 2.5747062791721436 0.012108109132834628 0.01445726221461945 3.37348462982126e-09 8.471921264224862 0.12790820374484435 FSNISAAK ddPTM_A549_MK2206_60min_R1 1 FSNISAAK 8 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 64.711 0.025738999999999998 1730300.0 2077.4 2175.0 2252.0 2929.6 2816.0 2257.2 2418.1 2347.4 3584.1 2853.7 3402.5 False True 2428.0143324463124 2285.698209823876 2571.3674630702135 3647.3521315147427 2401.7701303326417 2496.0554057919026 2857.4374696066143 2680.1511386110005 2772.3070726316114 2209.047188019276 2557.565345777233 0.9493459615626946 0.8937008055718954 1.0053965844179775 1.426103203007831 0.9390845611425637 0.9759498070745725 1.1172490565390625 1.0479306591466637 1.0839633392784807 0.8637304973132391 1.0 11.320555385952103 -5.9940229274996835 23.431270806165173 1.0610690506989202 0.9285295117873262 0.12676576580315913 0.1360303072831064 98.57284283957783 386401.27822024765 0.016343937236953238 0.05056623387227877 1.013857860213479e-06 5.9940229274996835 -0.13253953891159398 FSNISAAK ddPTM_A549_PD325901_60min_R1 2 FSNISAAK 8 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 ; 90.906 0.0072671 5387800.0 5515.1 5771.4 5110.1 5974.0 7079.799999999999 6461.9 6510.799999999999 7178.3 7447.4 6126.8 6892.9 False True 6074.988891997964 6257.776132730061 5456.902115527605 6343.00041206161 6582.539271984073 6409.276428836117 6758.572056846467 7035.123175232592 7134.411677031133 5739.952802393769 6045.11699769319 1.0049414915073063 1.0351786632281927 0.9026958647136115 1.0492766996043406 1.0889018813855815 1.0602402618976423 1.1180217123052425 1.163769564413259 1.1801941434307421 0.9495188934447636 1.0 12.561554546445558 -6.506152284977522 5.943067625235209 1.0931169209725071 0.9842999738744388 0.26677526858440515 0.06960516298844176 0.16310167842137374 20.941519090510088 0.010548766899388436 0.0237268131099683 3.117796139927436e-07 6.506152284977522 -0.10881694709806833 FSNS(ph)LK ddPTM_A549_PD325901_60min_R1 1 FSNSLK 6 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 FS(0.002)NS(0.998)LK 67.993 0.053991 7597200.0 4157.9 4743.3 4094.7 3703.9 5971.5 4163.4 4679.0 4535.7 3967.3 5068.3 5159.5 True False 4580.006947115799 5143.034537612795 4372.590965431375 3932.6814908327747 5552.082440556637 4129.494650770868 4857.061905447043 4445.231905312186 3800.5681776573842 4748.286673038512 4524.914208765256 1.0121754216342538 1.1366037675698186 0.9663367665537581 0.8691173598860147 1.2270028080978073 0.9126128055138776 1.073404197595256 0.9823903173017697 0.8399204940273267 1.0493650164329213 1.0 12.143674723982297 -8.527635826841891 24.7895489999862 0.9237094477963502 1.027115268393172 0.03751584706473121 0.10647533321385586 156.9289619790805 817764.6238010849 0.017272539976183353 0.019622481347248324 2.967318560954415e-09 8.527635826841891 0.10340582059682168 FSPDDKYS(ph)R ddPTM_A549_PD325901_60min_R1 2 FSPDDKYSR 9 1 Q9NPE3 Q9NPE3 NOP10 H/ACA ribonucleoprotein complex subunit 3 1 FS(0.078)PDDKY(0.122)S(0.8)R;FS(0.042)PDDKY(0.096)S(0.862)R 64.439 0.0017494 12510700.0 3439.4 3776.1 4161.9 4025.8 4568.1 3404.0 4029.8999999999996 4448.9 4408.2 4577.1 4533.6 True False 3788.565356047541 4094.325199224102 4444.351561537805 4274.46452274483 4247.252415089474 3376.278952592604 4183.260049745897 4360.163199405464 4222.9386839284325 4288.101124867227 3975.9959408582517 0.9528594627362089 1.0297609102539245 1.1177957995043764 1.0750676274136617 1.0682235289638322 0.8491655934296065 1.0521288532409583 1.0966216425422926 1.0621083991893805 1.078497359819136 1.0 11.957100568698438 -11.071634555822293 1.4370841152815181 1.0003121358670943 1.0386261269980108 0.0 0.07492796931525555 1.3855271095088302 5.175571299885387 0.04970280827457931 0.011376728766235373 8.47940627501938e-12 11.071634555822293 0.03831399113091649 FSPFLQTAEDNTQDEVAGAPADHHGPS(ph)DEEQGSPPEDK ddPTM_A549_MK2206_60min_R1 1 FSPFLQTAEDNTQDEVAGAPADHHGPSDEEQGSPPEDK 38 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 FSPFLQTAEDNT(0.009)QDEVAGAPADHHGPS(0.936)DEEQGS(0.054)PPEDK 84.60799999999999 3.2047000000000004e-06 5459300.0 812.97 976.21 803.91 792.02 1688.1 1050.0 1315.5 1240.4 1692.7 1654.1 1619.9 True False 950.1794607917974 1025.8949192699615 917.9165263040738 986.0649355551284 1439.782726212548 1161.1103030664094 1554.5093218921897 1416.230498565683 1309.3061526864567 1280.4376611776572 1217.6341230343971 0.7803489100846721 0.8425313481798513 0.7538524988250049 0.8098203860268073 1.1824428200357484 0.9535789783657443 1.2766637304958939 1.1631002053690604 1.0752870077454868 1.0515783328958874 1.0 10.249864979334562 -6.741798467142522 22.90935771146117 1.0668435531406564 0.7968598106528669 0.7191660250012746 0.08976251327568378 43.91910579720641 51226.715833567716 0.013439635577778924 0.027932116933153974 1.8121808338030131e-07 6.741798467142522 -0.26998374248778945 FSPFLQTAEDNTQDEVAGAPADHHGPS(ph)DEEQGSPPEDK ddPTM_A549_PD325901_60min_R1 3 FSPFLQTAEDNTQDEVAGAPADHHGPSDEEQGSPPEDK 38 0 Q92766;Q92766-2;A0A087X055;Q92766-5;Q92766-3 Q92766 RREB1 Ras-responsive element-binding protein 1 1 FSPFLQTAEDNTQDEVAGAPADHHGPS(0.952)DEEQGS(0.048)PPEDK;FSPFLQTAEDNT(0.013)QDEVAGAPADHHGPS(0.92)DEEQGS(0.067)PPEDK;FSPFLQTAEDNTQDEVAGAPADHHGPS(0.961)DEEQGS(0.039)PPEDK 135.22 1.8905e-29 17148200.0 2937.15 2327.46 3115.14 3381.7000000000003 3945.4 4131.700000000001 2790.48 3535.31 4006.0 3556.0199999999995 3682.4 True False 3235.3273057844517 2523.603222421582 3326.552133258576 3590.5799286020647 3668.2887148910922 4098.052805060771 2896.673243409246 3464.795468652955 3837.6417512402577 3331.4922903258284 3229.4881446568797 1.0018080763470931 0.7814251390260808 1.0300555333396366 1.1118108405329197 1.1358731014263665 1.268948087591191 0.8969449998451708 1.072862111101224 1.1883126920869969 1.0315852361426725 1.0 11.657089808812799 -5.949983743809838 6.680238577568787 1.0925900748167574 0.8924944428575613 0.3447970694997263 0.10349286725928507 0.1644677859697084 16.570727148975585 0.014741215401378908 0.046364714139703715 1.1220604536537646e-06 5.949983743809838 -0.2000956319591961 FSPIQEKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 FSPIQEKSPK 10 1 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 FSPIQEKS(1)PK;FSPIQEKS(1)PK 70.41199999999999 0.00087214 32705000.0 7475.200000000001 8644.0 8221.7 7611.200000000001 9866.6 7851.0 8406.6 6879.5 11829.7 11773.6 13253.1 True False 8736.83100890666 9083.942678490852 9387.660688776366 9475.944341679748 8415.23621020599 8681.787608927983 9933.970403207051 7854.690192585149 9150.291838149098 9113.935582879682 9961.989503047827 0.8770166848934808 0.9118602941422151 0.9423479803812534 0.9512100307655036 0.844734498829916 0.8714913427957165 0.9971873991804344 0.788466017775068 0.9185205259802378 0.9148710285321333 1.0 13.282218175505069 -10.162885998240036 0.897203226079715 0.9939526989522871 0.901664079054598 0.0652097422480652 0.058406083683810325 0.4640356097257834 0.7396252349994249 0.02313483914038413 0.010013749665657675 6.872488182965102e-11 10.162885998240036 -0.0922886198976891 FSPIQEKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 FSPIQEKSPK 10 1 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 FS(0.051)PIQEKS(0.949)PK;FSPIQEKS(1)PK 95.264 0.0001564 58088000.0 17399.8 17166.7 17504.9 17655.7 22047.3 21068.0 19449.3 21591.3 21497.7 18259.9 21956.3 True False 19166.214886944246 18613.398055538884 18692.88777951492 18746.252489996008 20498.773707055905 20896.42919307315 20189.453754565337 21160.644583452824 20594.22642926552 17106.966797745965 19255.814292453237 0.9953468908586168 0.9666378047088806 0.9707658941663693 0.9735372498551289 1.064549823535108 1.0852010138705432 1.0484861064783957 1.0989223442888172 1.069506909263081 0.8884052649204531 1.0 14.233006512855432 -6.752824120308685 24.84158851959763 1.045677148237522 0.9754476391515238 0.20696103954795408 0.05448029151970579 122.6796512086787 353736.71363977017 0.005169549262506727 0.01062894332715566 1.7667531719128746e-07 6.752824120308685 -0.07022950908599823 FSPPS(ph)PLPQAVFSTSSR ddPTM_A549_MK2206_60min_R1 1 FSPPSPLPQAVFSTSSR 17 0 A0A1X7SBS4;Q99594 A0A1X7SBS4 TEAD3 Transcriptional enhancer factor TEF-5 1 FS(0.022)PPS(0.978)PLPQAVFSTSSR 57.52 0.0039445 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FSPT(ph)MGR ddPTM_A549_MK2206_60min_R1 2 FSPTMGR 7 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.302)PT(0.698)MGR;FS(0.231)PT(0.769)MGR 103.74 0.010907 137157000.0 8018.1 8903.1 7422.0 7862.200000000001 10686.2 10186.5 8808.9 10174.6 11440.5 11581.8 10350.2 True False 9371.35925627601 9356.229761785264 8474.55120377759 9788.439352947566 9114.274135923537 11264.428668748547 10409.363105751505 11616.880708405683 8849.24501672441 8965.463336090566 7779.959689012054 1.20455113276635 1.2026064575886477 1.0892795775981379 1.2581606774611143 1.1715066016082305 1.4478775108125235 1.3379713419920494 1.4931800642634003 1.1374409856162302 1.1523791503383811 1.0 12.925546964730486 -9.127149680603978 2.885462740606635 1.0514687122836748 1.271671446436032 0.2924840780054634 0.11927571288431058 0.18168267581277495 3.1481991869250927 0.023903144433675024 0.023118195101669486 7.461915374366232e-10 9.127149680603978 0.22020273415235714 FSPVT(ph)PK ddPTM_A549_MK2206_60min_R1 2 FSPVTPK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(0.004)PVT(0.996)PK;FS(0.009)PVT(0.991)PK 78.264 0.017859 29721000.0 5195.799999999999 6049.7 6032.4 5249.6 8121.5 5818.1 6381.5 6060.1 8791.1 8504.0 8775.1 True False 6072.72401488618 6357.60388964207 6887.8850285189865 6535.752235663497 6926.838108485992 6433.767480257784 7540.935946526037 6919.137733277895 6799.929886501985 6582.9404937155 6596.000489560557 0.920667611304371 0.9638574011181782 1.0442517461028684 0.9908659415668003 1.0501573066055785 0.9754043363763332 1.143258851854396 1.0489898756418778 1.0309171288365102 0.9980200129054377 1.0 12.687375790515478 -5.572495537366765 3.567984762337811 1.0253678459681634 0.92648048126478 0.39348085636342955 0.043379356857645796 0.17260519246656728 4.336716762574879 0.005823556306160185 0.030424025384727972 2.6761130917063647e-06 5.572495537366765 -0.09888736470338344 FSPVT(ph)PK ddPTM_A549_PD325901_60min_R1 1 FSPVTPK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(0.014)PVT(0.986)PK 90.64 0.013250999999999999 18794000.0 5492.2 6598.9 6394.2 5808.3 6334.0 6705.9 6646.7 7102.7 7118.9 6402.5 7056.3 True False 6049.764100856051 7155.012461841562 6828.1488634481875 6167.065499393612 5889.12169111375 6651.289373734061 6899.643805713796 6961.031076539644 6819.717389641608 5998.24505734251 6188.41983357113 0.9775943235197304 1.1561937706661127 1.1033751825315141 0.9965493074562146 0.9516357728617993 1.074796079227195 1.1149282032037315 1.1248479036243193 1.1020127226413754 0.9692692510619668 1.0 12.595355359804723 FSRS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 FSRSPIR 7 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2;H7C2G8 P18583-5 SON Protein SON 1 FS(0.014)RS(0.986)PIR;FS(0.001)RS(0.999)PIR 85.73100000000001 0.0037563 17060500.0 1868.42 2140.4 1658.21 1905.02 2140.71 1997.55 1739.06 1647.26 2498.7 2549.3 2548.1099999999997 True False 2183.7636175167713 2249.337217612425 1893.3691123169008 2371.7499855195983 1825.8143947813899 2208.9294151336258 2055.0246912427433 1880.7641495221774 1932.7484396039745 1973.4113594342564 1915.3439627416362 1.140141749991953 1.1743776895261717 0.988526943017963 1.2382893264375656 0.9532566631885309 1.153280798698814 1.072927229374074 0.9819458990697624 1.009086867529227 1.0303169549815492 1.0 10.903387783225618 -7.599708900855304 0.5644851447030269 0.9983614424695878 1.131142325651472 0.25244770029803765 0.07786526634507437 0.7355169910628482 0.4688866480483605 0.016888838898015176 0.03949530572292047 2.5135706645226047e-08 7.599708900855304 0.1327808831818843 FSRS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 FSRSPIR 7 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2;H7C2G8 P18583-5 SON Protein SON 1 FS(0.048)RS(0.952)PIR;FS(0.035)RS(0.965)PIR 60.828 0.0079441 37456000.0 2368.44 2740.87 2666.83 2608.06 2555.4 2177.3 2454.52 2391.44 2589.44 2787.36 3094.09 True False 2608.882285246626 2971.8527339841003 2847.817120751547 2769.1539428659853 2375.9175196514175 2159.5687906815147 2547.9281017648823 2343.7408531516144 2480.614841820164 2611.3656139061677 2713.5365450525205 0.9614325224413482 1.0951953970926085 1.0494854495119494 1.020496277418806 0.8755797020619936 0.7958502695012409 0.9389695179931941 0.863721867842488 0.9141630490818217 0.96234768559405 1.0 11.405958623234053 -6.625309558871141 6.645524167247076 0.9323413096019377 1.0402476785225085 0.45622166584951995 0.06162221267537268 0.19385203138925153 10.996246862444586 0.010169253217606809 0.021290337579446362 2.369684026793179e-07 6.625309558871141 0.10790636892057082 FSRS(ph)PIRR ddPTM_A549_MK2206_60min_R1 1 FSRSPIRR 8 2 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2;H7C2G8 P18583-5 SON Protein SON 1 FS(0.006)RS(0.994)PIRR 44.863 0.018152 7891600.0 1113.1 1135.6 1088.7 976.05 1475.4 948.01 991.79 890.31 1678.6 1512.3 1360.8 True False 1300.9640673177973 1193.3971894602273 1243.0940306592097 1215.1822938165492 1258.3706144505616 1048.3277889618914 1171.9854050622994 1016.5141689600238 1298.3997801733833 1170.6703796620357 1022.8758038306116 1.271869040645757 1.1667078104604907 1.2152932213313614 1.188005708284193 1.2302281564761188 1.0248827717265023 1.1457748835912247 0.9937806380337046 1.2693621017438774 1.1444892676881608 1.0 9.998415270336768 -11.048522905813659 1.3247238537927561 0.9991876776176656 1.173915684721861 0.05939041423301117 0.0943616969671783 0.4093023553641449 1.2708229276744225 0.06434395944132618 0.01406261265467856 8.942873636613227e-12 11.048522905813659 0.17472800710419545 FSRS(ph)PIRR ddPTM_A549_PD325901_60min_R1 1 FSRSPIRR 8 2 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2;H7C2G8 P18583-5 SON Protein SON 1 FS(0.019)RS(0.981)PIRR 41.398999999999994 0.029342 26595000.0 2369.1 2181.1 2259.0 2700.3 3357.5 2378.3 2601.8 2713.2 3070.3 2921.2 2822.4 True False 2609.6092879607595 2364.908951571115 2412.3093244705296 2867.0913981737444 3121.680782746198 2358.9319133228537 2700.8129227595905 2659.083097535775 2941.265968255856 2736.7549334648907 2475.2626926677094 1.0542756919057583 0.9554173617921494 0.974566995097667 1.1582978270010373 1.2611513080988639 0.9530026531367948 1.0911217345779145 1.0742629884951538 1.1882641696853244 1.1056422179236898 1.0 11.273365927146433 -6.24479160911659 24.402167078813537 1.096103630390414 0.9908197367307777 0.2524673342463334 0.08282137286999935 772.7252860647623 1132650.9077809413 0.013109497359021853 0.03457149953903849 5.691259534475477e-07 6.24479160911659 -0.1052838936596362 FSS(ph)LGR ddPTM_A549_MK2206_60min_R1 2 FSSLGR 6 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 FS(0.001)S(0.999)LGR;FS(0.001)S(0.999)LGR 116.3 0.019392 30343000.0 3688.7 3999.3 3690.7 3367.0 4300.1 3305.8999999999996 3190.8999999999996 3687.4 5374.2 4890.5 4672.6 True False 4311.262379943544 4202.847287608568 4214.096756639982 4191.915151150372 3667.560986308027 3655.728143721183 3770.645226321388 4210.100242188893 4156.952280833905 3785.732653400238 3512.2644628005 1.227487971252018 1.1966203946548581 1.199823305241621 1.1935078339197596 1.0442154983351402 1.040846491612506 1.0735652927783428 1.1986854312308746 1.183553324318683 1.0778609337355218 1.0 11.778185764161227 -14.585840700937645 0.30015106178156764 1.4924494144495123e-12 1.1609504029314108 0.24594137074650946 0.06854719102403786 28.297719178538323 0.47134195411095403 16.974949418156655 0.026611302708304044 2.595131080725649e-15 14.585840700937645 1.1609504029299185 FSS(ph)LGR ddPTM_A549_PD325901_60min_R1 2 FSSLGR 6 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 FS(0.003)S(0.997)LGR;FS(0.054)S(0.946)LGR 106.42 0.027598 48013000.0 4983.3 3921.7 4942.9 5007.299999999999 5256.8 4550.9 4282.4 4334.0 4690.200000000001 4995.4 4940.6 True False 5489.200947488433 4252.195422207348 5278.354918072326 5316.5895485965975 4887.580502975489 4513.838979246084 4445.369075419194 4247.554970042774 4493.08720460985 4679.989591479702 4332.937521043822 1.266854396314042 0.9813655058619394 1.2181931755158908 1.227017357802983 1.1280062265467543 1.041750303881299 1.0259481134517459 0.9802945344615818 1.0369609953497432 1.0800962554272588 1.0 12.08112971842624 -7.252195329210358 2.8626315928088837 1.0157044864050058 1.1640731003962814 0.4748046595843245 0.07220857288990576 0.16381686333206047 2.694558795399386 0.009863037336809427 0.017340831966939828 5.595059003321677e-08 7.252195329210358 0.14836861399127566 FSS(ph)PAPSSDGK ddPTM_A549_MK2206_60min_R1 1 FSSPAPSSDGK 11 0 Q96QT6;Q96QT6-5;Q96QT6-3;Q96QT6-4 Q96QT6 PHF12 PHD finger protein 12 1 FS(0.082)S(0.908)PAPS(0.004)S(0.007)DGK 80.623 0.00085802 18963000.0 4493.4 6083.8 4915.0 6291.7 5884.3 5993.3 5219.6 6618.7 6912.3 8901.9 8401.6 True False 5251.776066917431 6393.439433989197 5612.020906301107 7833.166782445146 5018.727264885074 6627.507027969436 6167.933756403245 7556.920993918644 5346.6750866748935 6890.954607361949 6315.25084763615 0.831602131668802 1.0123809153807903 0.8886457627255983 1.240357187929782 0.7946995908743079 1.0494447786583436 0.9766728044875609 1.1966145409326474 0.8466290913331175 1.0911608697129251 1.0 12.624624325001623 FSS(ph)PIVK ddPTM_A549_MK2206_60min_R1 3 FSSPIVK 7 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 FS(0.015)S(0.985)PIVK;FS(0.008)S(0.992)PIVK;FS(0.024)S(0.976)PIVK 93.162 0.012184 50533400.0 5562.5 6523.4 5954.599999999999 5478.1 8362.099999999999 6117.799999999999 6186.1 5580.0 8361.099999999999 7788.400000000001 8294.099999999999 True False 6501.314009931947 6855.413196305779 6799.051818649154 6820.234745921257 7132.046167206888 6765.181535333028 7310.034295824609 6370.982088033309 6467.32419993308 6028.995030721279 6234.446064485209 1.0428053980556449 1.0996026151157094 1.0905622966858668 1.093960020726303 1.1439743151897483 1.0851295312138758 1.1725234640277884 1.0219002654182676 1.037353460602454 0.9670458238568636 1.0 12.606045665804103 -8.377462915825374 9.605034821239416 1.0182842935578942 1.1037724609989197 0.6279006936073166 0.03570309711628229 0.18180802071166643 14.03951012387732 0.005239527079196234 0.00633412840202806 4.1931179996736296e-09 8.377462915825374 0.0854881674410255 FSS(ph)PIVK ddPTM_A549_PD325901_60min_R1 2 FSSPIVK 7 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 FS(0.11)S(0.89)PIVK;FS(0.03)S(0.97)PIVK 104.06 0.010203 107718000.0 6595.9 6336.700000000001 5789.9 6055.700000000001 6709.7 6940.0 7048.8 5766.8 6391.3 5785.9 6437.7 True False 7265.510912355059 6870.715947650586 6182.837431497089 6429.746835507448 6238.433819208384 6883.482940949671 7317.045941251364 5651.77665003292 6122.695887344452 5420.577286572125 5645.903711942646 1.2868641200852393 1.2169382083362712 1.095101465938691 1.1388339517563428 1.1049486738522256 1.2191994926143006 1.2959919818989811 1.0010402122299484 1.08444922190105 0.9600902819341581 1.0 12.46298880921884 -10.137496006857036 0.026503575955825066 1.8743159204087833e-06 2.1131440031505777 0.5109821647893567 0.07718494946939862 215.80804999921034 1.7511212988366147 76.24885014295748 63.36574272261432 7.286248738613284e-11 10.137496006857036 2.1131421288346575 FSS(ph)PTEELDYR ddPTM_A549_MK2206_60min_R1 2 FSSPTEELDYR 11 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 FS(0.001)S(0.941)PT(0.058)EELDYR;FS(0.049)S(0.95)PT(0.001)EELDYR 270.06 2.2330999999999996e-76 157103000.0 4994.6 4914.5 4451.3 4204.6 6271.799999999999 4405.5 4788.7 4054.3 6616.6 5909.9 6272.3 True False 5837.566373753907 5164.627058473306 5082.561273696463 5234.727188751669 5349.226528203219 4871.687085865776 5658.744804063191 4629.009440773018 5117.9506645390275 4574.84948539619 4714.714803326533 1.2381589591877604 1.0954272472280466 1.078020937790424 1.110295618529934 1.1345811467597142 1.0332941204478558 1.2002305632719468 0.9818217291758464 1.0855270950700955 0.970334299365964 1.0 12.202954788484886 -2.000000000005642 0.014466608685441461 1.669419664227484e-10 2.4145409337647297 0.4459740069172501 0.06091739180724665 3347.993114169931 3.6376498681510707 243.29237080636054 377.81108764240395 0.009999999999870085 2.000000000005642 2.4145409335977877 FSS(ph)PTEELDYR ddPTM_A549_PD325901_60min_R1 2 FSSPTEELDYR 11 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 FS(0.01)S(0.989)PT(0.001)EELDYR;FS(0.005)S(0.698)PT(0.297)EELDYR 232.19 3.8322e-40 208200000.0 11384.7 12271.4 12161.2 12135.3 14179.8 11883.8 11836.900000000001 12420.599999999999 12293.3 13785.1 13343.8 True False 12540.466363026822 13305.553944482042 12986.532163236387 12884.869919734043 13183.859765654364 11787.022272861337 12287.35970690021 12172.861389227794 11776.655352102318 12914.706433420122 11702.597193317533 1.071596856310472 1.1369744446198522 1.109713677118786 1.1010265248718991 1.1265755411271157 1.0072142173356196 1.0499686098669267 1.040184600746473 1.0063283523786561 1.1035760882887375 1.0 13.514541126631782 -7.543170013467406 0.8799701891949527 1.0037305954457654 1.1143903181895853 0.3138813959923332 0.03989469450092416 0.1850685236498619 0.28719482896562126 0.004516365487507794 0.009146367628426036 2.863056948232096e-08 7.543170013467406 0.11065972274381997 FSS(ph)SGGGGGGGRFSSSSGYGGGSSR ddPTM_A549_MK2206_60min_R1 1 FSSSGGGGGGGRFSSSSGYGGGSSR 25 1 P35527 P35527 KRT9 Keratin, type I cytoskeletal 9 1 FS(0.006)S(0.959)S(0.033)GGGGGGGRFSSSSGYGGGSSR 50.425 0.006962100000000001 7298900.0 557.73 788.6 490.27 662.34 985.86 896.2 1090.7 603.42 1189.5 1235.7 1094.5 True False 651.8611888106685 828.7363716170619 559.7976581347397 824.6133297335721 840.8412999608448 991.0352891505864 1288.8660717505209 688.956632896247 920.0801492411773 956.5545117690779 822.7054433367172 0.7923384901488667 1.0073306045671517 0.6804350969945211 1.0023190394719121 1.0220441675340963 1.2046052413743118 1.5666191128177736 0.8374280715853616 1.1183591365453098 1.1626937921906746 1.0 9.684232178741691 -6.540254687010565 3.400182093955702 1.0887242075921002 0.8429471167978735 0.31973889933170074 0.186343352495941 0.25508013446172956 6.186735964918272 0.026413566209878902 0.06103492112182734 2.882340691804751e-07 6.540254687010565 -0.24577709079422672 FSS(ph)SIENSDSPVR ddPTM_A549_MK2206_60min_R1 1 FSSSIENSDSPVR 13 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 FS(0.015)S(0.562)S(0.423)IENSDSPVR 92.85600000000001 0.00017743 1996400.0 1282.2 1605.2 1327.8 981.87 1838.7 1186.0 1302.8 1327.9 1710.8 1520.0 2351.1 True False 1498.6040132197288 1686.8978236364537 1516.1020059789648 1222.4281940778196 1568.2296657111608 1311.5017327969156 1539.5018962836514 1516.1338915231956 1323.3065315862164 1176.630944314152 1767.2569829410295 0.8479830764203775 0.9545288771920177 0.8578842922187252 0.6917093585583021 0.8873806587547602 0.7421115013020595 0.8711250888490744 0.8579023346112796 0.7487912309074594 0.6657950460357096 1.0 10.787296127074217 -10.960597564005548 1.2032084168725021 1.0007873648584347 0.8229095799367303 0.0 0.1214544196230478 0.35652434102508646 0.9109790387813003 0.0526372871152284 0.01199006945165225 1.0949705432318321e-11 10.960597564005548 -0.17787778492170436 FSSAT(ph)WPR ddPTM_A549_MK2206_60min_R1 2 FSSATWPR 8 0 A0A0A6YYJ5;O94854-2;O94854 A0A0A6YYJ5 MACF1;KIAA0754 Uncharacterized protein KIAA0754 1 FS(0.005)S(0.044)AT(0.951)WPR;FS(0.002)S(0.056)AT(0.942)WPR 58.699 0.014905000000000002 11002300.0 2045.13 1950.8899999999999 1762.12 1976.42 3684.2 2898.4 2391.46 2509.2 4129.2 3193.3 3110.5 True False 2390.2979453720654 2050.1819680750823 2012.0151127998608 2460.642988724867 3142.2590604302295 3205.1067641977897 2825.957326440361 2864.886784102719 3193.942792977441 2471.931312156833 2338.077004567254 1.0223349961112496 0.8768667430842565 0.8605427061938268 1.0524217054948104 1.3439502010806605 1.3708302840055566 1.2086673453954129 1.225317548783202 1.3660554321942002 1.0572497429845573 1.0 11.191106730475985 -6.531064523411468 5.74865421035128 1.208522455067877 0.9206281345328691 0.5663923338281442 0.11763771551885585 0.11932571746776054 14.073147420593692 0.02175507108354622 0.04750768345666057 2.9439842116711624e-07 6.531064523411468 -0.28789432053500796 FSSAT(ph)WPR ddPTM_A549_PD325901_60min_R1 1 FSSATWPR 8 0 A0A0A6YYJ5;O94854-2;O94854 A0A0A6YYJ5 MACF1;KIAA0754 Uncharacterized protein KIAA0754 1 FS(0.006)S(0.106)AT(0.888)WPR 51.43600000000001 0.03096 6110600.0 1661.6 2045.7 1833.0 2130.7 1756.3 2302.2 2113.7 1809.5 2561.2 1948.5 2643.0 True False 1830.2844087947306 2218.0983183847734 1957.3984027244285 2262.308499829205 1632.943546906075 2283.4516464919784 2194.1380101610216 1773.4081029747122 2453.561670812919 1825.471377466909 2317.9277553574125 0.7896209899400036 0.9569316011933918 0.8444604876922093 0.9760047501913488 0.7044842286960249 0.9851263229469729 0.946594649073822 0.7650834237071646 1.058515160855215 0.7875445527789673 1.0 11.178619886117845 -8.782471951340506 24.99996119971963 1.0276321759619385 0.8772840311654557 0.0 0.11405492567101469 167.18118192872373 198715.84694814403 0.014165540962826084 0.015087827974723706 1.6501675730029895e-09 8.782471951340506 -0.15034814479648273 FSSLPLGR ddPTM_A549_PD325901_60min_R1 1 FSSLPLGR 8 0 P40261 P40261 NNMT Nicotinamide N-methyltransferase 0 70.69 0.017943999999999998 1701600.0 1102.4 1377.5 1229.1 1307.1 1595.5 1318.9 1410.6 1358.9 1379.4 1250.9 1470.3 False True 1214.3148364560136 1493.5867593366702 1312.5141171787197 1387.836598360517 1483.4375841761898 1308.1593156799008 1464.2811549099376 1331.7956734635727 1321.4286149927145 1171.9179605200707 1289.4624209996227 0.9417217723294697 1.158301890006849 1.0178769817589772 1.0762908447418205 1.1504310323570288 1.0144997592607499 1.1355748962228702 1.0328301560204696 1.024790326164225 0.9088422752262693 1.0 10.332554013719825 -8.506982230233136 19.363831918610664 1.012606630445512 1.0739249267945599 0.2178073906793856 0.06875766412605364 43.444895764040226 52920.92677079887 0.009008822655903873 0.010700749792984712 3.111843659942022e-09 8.506982230233136 0.06131829634904795 FSSSIENSDS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 FSSSIENSDSPVR 13 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 FSSSIENS(0.014)DS(0.986)PVR;FSSSIENS(0.015)DS(0.985)PVR 144.18 2.0895e-12 25418000.0 8648.099999999999 8863.900000000001 7268.6 8113.1 11903.2 9262.599999999999 7673.2 7613.3 12885.3 12501.8 13391.1 True False 10107.687854254822 9315.034649222003 8299.396777119071 10100.809864210905 10152.255048073688 10242.762183983732 9067.321116490413 8692.508589753394 9966.80012359591 9677.63469712281 10065.720294441579 1.0041693548584316 0.9254215671347321 0.8245209020662044 1.0034860465761903 1.0085969757852198 1.0175885961822244 0.9008119489965866 0.8635754159146971 0.9901725690807945 0.9614448260068309 1.0 13.297162793541148 -8.962675900586714 24.998212121720577 0.9956644611589437 0.9430839412195428 0.07181935323392663 0.060969593289370135 248.73383025681946 166593.0938298341 0.010759903380939064 0.011426573932733077 1.0897430286540879e-09 8.962675900586714 -0.05258051993940094 FSSSIENSDS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 FSSSIENSDSPVR 13 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 FSSSIENSDS(1)PVR;FSSSIENSDS(1)PVR 216.01 1.1287999999999998e-37 47398000.0 13748.2 15422.2 13169.5 14366.7 15591.6 15100.5 13780.900000000001 16266.099999999999 16435.5 15287.2 17772.0 True False 15143.907143110087 16721.882918215604 14063.26146463686 15254.098429856958 14496.49980409996 14977.526534554814 14305.339690697832 15941.659874991405 15744.773090990839 14321.963583070135 15586.156665990124 0.9716254922648732 1.072867627123478 0.9022918071472804 0.9786953099953284 0.9300881618707287 0.9609505958089479 0.9178234248031713 1.0228089077134075 1.0101767503304278 0.9188900054059812 1.0 13.927977602486278 -8.290065278217806 24.975644047325524 1.0062902061519596 0.963381558471018 0.01289517350706626 0.04970629250581206 864.2031610561673 754000.8354731788 0.006670924138784378 0.00806564016482953 5.127843022816443e-09 8.290065278217806 -0.0429086476809416 FSSVS(ph)SPQPR ddPTM_A549_PD325901_60min_R1 1 FSSVSSPQPR 10 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 FS(0.019)S(0.101)VS(0.44)S(0.44)PQPR 55.353 0.017356 26101000.0 5433.5 5436.3 5141.4 5097.3 5413.9 5507.0 4891.8 5685.8 5280.8 6120.5 6178.9 True False 5985.104920068708 5894.436079696508 5490.3263217497915 5412.148644191771 5033.646340941067 5462.152817840033 5077.960125895672 5572.3922585761875 5058.866340476673 5734.050585468934 5418.934471274273 1.1044800323376671 1.0877481746536823 1.0131745181370924 0.9987477562021697 0.9288996513289439 1.0079754325863988 0.937077234060293 1.0283188121420166 0.9335537027239731 1.0581509364737824 1.0 12.40379348603234 -5.857341411999781 1.6579453816698542 0.9710597547329846 1.110847951405954 0.4946980869182884 0.040435002270354126 0.18406434120408288 0.8948749308536809 0.004655852451238184 0.028519249706608376 1.3888603768827267e-06 5.857341411999781 0.13978819667296938 FSSVSS(ph)PQPR ddPTM_A549_MK2206_60min_R1 2 FSSVSSPQPR 10 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 FSSVS(0.059)S(0.94)PQPR;FSSVS(0.261)S(0.739)PQPR 119.03 9.7038e-10 37516000.0 9104.8 8917.3 8580.4 8897.0 12056.0 10017.0 9462.4 9859.2 14617.0 13911.0 15274.0 True False 10641.467649011844 9371.152481132161 9797.229742507845 11076.765399401502 10282.578370486626 11076.99229125355 11181.595596710484 11256.77179253369 11306.272838552562 10768.4954383909 11481.044259045248 0.9268728008454501 0.8162282340954461 0.853339602344027 0.9647872745264231 0.8956135120187853 0.9648070368273889 0.9739179942539768 0.9804658477529283 0.9847773933668975 0.937936932862795 1.0 13.486966247941957 -6.941384487760582 0.7118723696361624 0.9934243031319003 0.858397211243375 0.5399723776676273 0.037953676450128704 0.31012152446964136 0.28481126738623086 0.005864228485196615 0.021459658963162945 1.1444992495403899e-07 6.941384487760582 -0.13502709188852535 FSSVSS(ph)PQPR ddPTM_A549_PD325901_60min_R1 2 FSSVSSPQPR 10 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 FSSVS(0.019)S(0.981)PQPR;FSSVS(0.033)S(0.967)PQPR 155.26 1.6324e-08 99249000.0 17309.5 17915.0 17836.3 17475.9 20933.6 19440.7 18676.5 18858.1 18814.2 19969.4 21528.1 True False 19066.747697419592 19424.75992269798 19046.778576385008 18555.34665235143 19463.296152999497 19282.381384743552 19387.244427672937 18481.96040160673 18023.504602142908 18708.52867600088 18880.280177869794 1.0098763110395133 1.0288385415734662 1.0088186402397976 0.9827897932415627 1.030879625177018 1.0212974173627505 1.0268515215360718 0.9789028673033175 0.9546206111532635 0.9909031274827038 1.0 14.204592553583108 -8.274269383828809 23.20830320007797 0.9779969865600627 1.0154107519092859 0.5060909536041467 0.01629647314512391 207.1798659844399 374768.35754328815 0.0033193150682987132 0.004028725014588613 5.317783059297102e-09 8.274269383828809 0.03741376534922314 FST(ph)WEPTKR ddPTM_A549_MK2206_60min_R1 2 FSTWEPTKR 9 1 Q9UPT9-2;Q9UPT9;K7ESK0;K7ERX6 Q9UPT9-2 USP22 Ubiquitin carboxyl-terminal hydrolase 22 1 FS(0.118)T(0.882)WEPTKR;FS(0.177)T(0.823)WEPTKR 48.004 0.020521 7467300.0 4181.9 3399.6 3670.1 3427.6 5201.299999999999 4206.3 3838.2000000000003 3724.4 6090.6 5544.6 5835.1 True False 4887.702482361237 3572.6251191343686 4190.575366880104 4267.362153870809 4436.195660120444 4651.407874084035 4535.551257534476 4252.345105496641 4711.0888246896275 4292.071009108058 4386.083629432687 1.1143660028647087 0.8145364796877951 0.9554253226635647 0.972932236228876 1.0114252337441725 1.0604922904047924 1.0340776968087864 0.9695084418731558 1.0740991788382699 0.978565702739054 1.0 12.098717604794334 -6.719739259618456 2.5160648501319143 1.0319448661113988 0.9486100323847962 0.09728202382618834 0.07133489368049517 0.3157222063329106 4.071613285600787 0.009574899157387419 0.02142675390367085 1.9066050560747752e-07 6.719739259618456 -0.08333483372660255 FST(ph)WEPTKR ddPTM_A549_PD325901_60min_R1 1 FSTWEPTKR 9 1 Q9UPT9-2;Q9UPT9;K7ESK0;K7ERX6 Q9UPT9-2 USP22 Ubiquitin carboxyl-terminal hydrolase 22 1 FS(0.07)T(0.929)WEPT(0.001)KR 55.401 0.01096 6942100.0 1582.5 1537.1 1407.8 1646.7 1539.4 1669.5 1618.0 1621.3 1975.5 1732.8 2557.6 True False 1743.1542350250727 1666.6368114529193 1503.3417737891152 1748.4129190729566 1431.2778546416973 1655.9041455209617 1679.5738754035726 1588.961899614754 1892.476604986303 1623.390712278502 2243.0314139622064 0.7771421408431703 0.7430287427445726 0.6702276947310045 0.7794865948776303 0.638099781274759 0.7382438494679338 0.7487964122788128 0.7083993071715076 0.8437138210397752 0.7237485405569335 1.0 11.131234110369432 -9.472874119633353 0.6691599368422565 0.9846402522734685 0.717080571632454 0.05256555340766411 0.08952491760007344 0.1651216649535213 0.16213708808851082 0.018016830087566323 0.01106254186579748 3.3660912147700217e-10 9.472874119633353 -0.26755968064101454 FSTYSQS(ph)PPDTPSLR ddPTM_A549_MK2206_60min_R1 2 FSTYSQSPPDTPSLR 15 0 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 H3BMG9 FAM65A Protein FAM65A 1 FSTYS(0.033)QS(0.955)PPDT(0.012)PSLR;FST(0.014)YS(0.014)QS(0.971)PPDTPSLR 153.24 1.1571e-14 6350500.0 2659.8999999999996 2730.8 3004.0 3033.9 4155.700000000001 2558.8 2667.1000000000004 2311.3 3974.5 4180.7 4576.700000000001 True False 3108.8260916886247 2869.7860558101347 3430.0123708094684 3777.2056361969467 3544.4020350225023 2829.5705176060287 3151.6775464984075 2638.933853059387 3074.2820959723035 3236.2769663777503 3440.1790795058514 0.9036814711794532 0.8341967058942618 0.9970447152716703 1.097967736243401 1.0302957936514228 0.8225067510184584 0.9161376409948739 0.7670920007566712 0.8936401346914459 0.9407292154228816 1.0 11.748267951447156 -7.217688695635261 24.98833071450669 0.9226240801889776 0.9732648818319912 0.12588204156255334 0.0878849021655123 1216.4578572550129 694783.5125201556 0.014797991195573009 0.025630767579386222 6.057749415442884e-08 7.217688695635261 0.050640801643013655 FSTYT(ph)SDKDENK ddPTM_A549_MK2206_60min_R1 2 FSTYTSDKDENK 12 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FS(0.01)T(0.009)Y(0.041)T(0.47)S(0.47)DKDENK;FS(0.042)T(0.037)YT(0.497)S(0.424)DKDENK 90.334 0.00010799 39133000.0 6370.2 8079.400000000001 7335.3 6095.6 8945.6 7975.200000000001 7389.799999999999 8211.0 10415.1 10166.1 10593.0 True False 7445.3340235628675 8490.606950092428 8375.555840079453 7589.0222736418855 7629.714090164663 8819.130370490699 8732.431004879429 9374.934395132883 8056.096479497087 7869.570949336916 7962.465748072952 0.9350538211564378 1.066328850726585 1.0518796695742743 0.9530995188869169 0.9582099730866885 1.107587856516064 1.0966993493181205 1.177390860036261 1.011759012143543 0.9883334130814292 1.0 12.958999546041502 -5.2448663345320545 23.001444103235436 1.0279705871589313 0.9350536038402106 0.1490335934017959 0.06641499582340038 1717.6594865846068 2383789.555305466 0.009498764674090188 0.3160437006025807 5.69028037133684e-06 5.2448663345320545 -0.09291698331872067 FSTYT(ph)SDKDENKLSEASGGR ddPTM_A549_PD325901_60min_R1 2 FSTYTSDKDENKLSEASGGR 20 2 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FS(0.005)T(0.024)YT(0.577)S(0.393)DKDENKLSEASGGR;FS(0.002)T(0.012)YT(0.493)S(0.493)DKDENKLSEASGGR 149.07 1.1577000000000001e-21 97284000.0 16150.6 14137.9 15517.099999999999 15664.1 17946.6 18975.6 17664.1 18926.4 18493.5 18500.1 19957.8 True False 17790.19702255668 15329.350449964373 16570.18371790246 16631.63588124777 16686.092728408916 18821.069004940127 18336.3169916664 18548.89810452643 17716.28250787862 17332.00052875319 17503.117122917956 1.0164016442112949 0.875806882986155 0.946699013754873 0.9502099405751505 0.9533212062302172 1.0752981239151107 1.0476029419729749 1.0597482707945298 1.0121787098528612 0.9902236502810855 1.0 14.095324253453466 -7.098482005418626 8.204002396368146 1.0181959973459713 0.9433100413520001 0.5078065354113608 0.03926914775472203 0.21225267098584283 15.984995454641718 0.005710367125008328 0.009916341171735408 7.971095173855209e-08 7.098482005418626 -0.07488595599397119 FSTYTS(ph)DKDENK ddPTM_A549_PD325901_60min_R1 2 FSTYTSDKDENK 12 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FSTYT(0.03)S(0.97)DKDENK;FS(0.003)T(0.003)YT(0.117)S(0.876)DKDENK 97.79700000000001 7.0498e-05 75474000.0 13107.5 12218.8 13634.4 12288.0 15239.7 12975.7 13544.8 13807.4 14089.2 14883.099999999999 14545.400000000001 True False 14438.163750768495 13248.521157882331 14559.712374307657 13047.001851927187 14169.31604611086 12870.030201279618 14060.254775998952 13532.000575304242 13497.0799205128 13943.378526034267 12756.408010887517 1.1318361515597188 1.0385777208266465 1.1413645880471235 1.0227802247146414 1.1107606493942053 1.0089070677494107 1.1022111211869838 1.0608002318328766 1.0580627327844268 1.0930489612854715 1.0 13.63893452727188 -14.999999990780164 0.11494552123998904 0.7473743807782792 1.1151793688942595 0.0 0.04821407679991458 62.20978952983986 0.5023299300544996 3.646598221608432 0.15231958439885665 1.0000000212294562e-15 14.999999990780164 0.3678049881159803 FSTYTS(ph)DKDENKLSEASGGR ddPTM_A549_MK2206_60min_R1 1 FSTYTSDKDENKLSEASGGR 20 2 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FS(0.029)T(0.026)Y(0.001)T(0.129)S(0.815)DKDENKLSEASGGR 76.691 6.5918e-05 7312100.0 1956.1 2710.3 2882.0 2068.4 3729.2 2453.4 2389.5 2353.5 3647.1 3457.0 3693.2 True False 2286.2418579465857 2848.2426933727156 3290.710936309218 2575.158092854006 3180.6396200413674 2713.017159564883 2823.641219811013 2687.1158322914675 2821.0376732219393 2676.061299009229 2776.076512865384 0.8235514573720429 1.025995746216967 1.1853819305983913 0.927625042364558 1.1457319729125208 0.9772847207170767 1.0171337881809799 0.9679545285723794 1.0161959370169333 0.9639724577501209 1.0 11.438831615982531 -5.260271846222894 24.280739110058473 1.0195931586331966 0.8235513734122436 0.3753768960570203 0.07376112665151278 48.445427049140484 1007302.8680234189 0.008812290783870563 0.07530536582838344 5.49196996899927e-06 5.260271846222894 -0.19604178522095295 FSTYTS(ph)DKDENKLSEASGGR ddPTM_A549_PD325901_60min_R1 2 FSTYTSDKDENKLSEASGGR 20 2 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FS(0.085)T(0.078)Y(0.009)T(0.174)S(0.651)DKDENKLS(0.002)EASGGR;FS(0.001)T(0.003)YT(0.054)S(0.941)DKDENKLSEASGGR 84.68 2.3367e-05 10484500.0 3577.6 3806.5 3456.6 4026.5 4056.7 4894.799999999999 4039.0 4473.6 4726.9 4256.6 5210.3 True False 3940.7953183100776 4127.287113912914 3691.1856622243636 4275.2077601550145 3771.7713868552514 4854.938371665765 4192.706355225604 4384.370538528692 4528.244831237538 3987.8375495641017 4569.466130812985 0.8624191985440854 0.9032317990238828 0.8077936364018173 0.9356033369689037 0.8254293343857633 1.062473871712884 0.9175484039488111 0.9594929501641012 0.990978968134268 0.8727141060687976 1.0 12.157809903901617 -7.253183989389256 24.998925050670845 0.9902751765274781 0.8694478148720911 0.39768783902752725 0.05773862573877106 287.468690595297 870510.4066289568 0.006124578334766586 0.010495776906593889 5.5823364826486085e-08 7.253183989389256 -0.12082736165538699 FSVPT(ph)PR ddPTM_A549_MK2206_60min_R1 4 FSVPTPR 7 0 A0A3B3IS46;A0A3B3IRX3;Q71F56;F8VRB8;H0YHC1 A0A3B3IS46 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 FSVPT(1)PR;FS(0.001)VPT(0.999)PR;FS(0.003)VPT(0.997)PR;FS(0.008)VPT(0.992)PR 86.794 0.013768 50216700.0 2267.41 2805.72 2237.13 2121.2299999999996 4451.570000000001 2567.59 1885.63 2287.04 4098.2 2840.9300000000003 3569.14 True False 2650.0933751478256 2948.5191638009424 2554.388673471699 2640.931445225633 3796.749949959121 2839.290669571696 2228.224563009933 2611.2349237662515 3169.9642434806133 2199.161939888425 2682.8240347471997 0.987799923075291 1.099035615311527 0.9521268038410118 0.9843848910778399 1.415206476751609 1.0583216166241183 0.8305518864266089 0.9733157635186857 1.1815773984518207 0.8197190391190342 1.0 11.389536716628086 FSVPT(ph)PR ddPTM_A549_PD325901_60min_R1 2 FSVPTPR 7 0 A0A3B3IS46;A0A3B3IRX3;Q71F56;F8VRB8;H0YHC1 A0A3B3IS46 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 FSVPT(1)PR;FS(0.001)VPT(0.999)PR 83.206 0.015487 80241000.0 1417.0 1662.1100000000001 1724.04 1702.46 2092.36 1931.5 1682.39 1906.17 1870.5 2133.5 1914.17 True False 1560.8527968597327 1802.1818428755523 1841.0437218947204 1807.6170876328097 1945.399851850138 1915.7705043867838 1746.4142720891325 1868.1499439885624 1791.889389838968 1998.7904458946116 1678.7392249233808 0.9297768073126257 1.073532932405154 1.0966823760127171 1.0767706269062194 1.1588457712596356 1.1411960094482343 1.0403130195333588 1.1128291495505065 1.0674018711397844 1.1906497544226013 1.0 10.71316242433 -10.14361578825468 0.7826530772454322 1.0032883344728867 1.0823792317426542 0.0 0.07978953931673327 0.7056351217132093 0.8477240575083516 0.029149232650540327 0.011513379171703966 7.184295906722931e-11 10.14361578825468 0.07909089726976748 FSVPTPRT(ph)PR ddPTM_A549_MK2206_60min_R1 2 FSVPTPRTPR 10 1 A0A3B3IS46;A0A3B3IRX3;Q71F56;F8VRB8;H0YHC1 A0A3B3IS46 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 FSVPT(0.002)PRT(0.998)PR;FS(0.001)VPT(0.041)PRT(0.958)PR 58.674 0.004246 3333700.0 754.32 852.3799999999999 888.01 692.51 1177.68 886.62 469.24 742.37 1092.02 1161.81 1417.8 True False 881.6307746466273 895.762501190655 1013.943170906297 862.1749810879551 1004.444832063262 980.4415399092755 554.494834059058 847.6032209127754 844.6792135976041 899.3563140879113 1065.7211307106415 0.8272621694746171 0.8405224175233768 0.9514150950823148 0.8090061801749597 0.9425025019382702 0.9199794502108632 0.5203001217488398 0.7953330345881185 0.7925893456146048 0.8438946063574856 1.0 10.057614259368385 -10.714780504846763 1.0238422144998922 0.9977057859171492 0.8224316344837965 0.04157818644741218 0.1189914578579174 0.5904661114621448 1.1214840681561544 0.07240849801168667 0.01982028651092863 1.9284993425840774e-11 10.714780504846763 -0.17527415143335268 FSVPTPRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 FSVPTPRTPR 10 1 A0A3B3IS46;A0A3B3IRX3;Q71F56;F8VRB8;H0YHC1 A0A3B3IS46 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 FSVPT(0.007)PRT(0.993)PR;FSVPT(0.003)PRT(0.997)PR 78.692 0.00051997 5953000.0 1212.69 1360.59 1279.74 1562.78 1540.44 1217.6100000000001 1534.56 1649.94 1613.62 1553.88 1732.54 True False 1335.8013960648066 1475.2516942910197 1366.5908521017784 1659.3093712691052 1432.244808629501 1207.6941878573084 1592.9585205434526 1617.0306523471093 1545.8051629147042 1455.7677516131807 1519.4485634759483 0.8791356470856615 0.9709125598277429 0.8993992195270587 1.092047082839847 0.942608287675789 0.7948240018698239 1.0483793652740308 1.0642220416122072 1.0173461610167716 0.958089524454129 1.0 10.569332122092751 FSVS(ph)PVVR ddPTM_A549_MK2206_60min_R1 2 FSVSPVVR 8 0 P13639 P13639 EEF2 Elongation factor 2 1 FS(0.125)VS(0.875)PVVR;FS(0.196)VS(0.804)PVVR 53.327 0.025269999999999997 8343800.0 907.5999999999999 1011.3799999999999 970.55 1045.4 1415.5300000000002 974.98 1160.09 852.19 1692.33 1581.33 1556.13 True False 1060.7806913104237 1062.854922046746 1108.188584050975 1301.523046929789 1207.307412141253 1078.1517364606552 1370.863336551813 972.9905422224199 1309.0199570956877 1224.1064547186181 1169.6999739968626 0.906882717698743 0.908656019214032 0.9474126773417774 1.1126981925822288 1.0321513541766492 0.9217335730773873 1.1719785988090397 0.8318291560678702 1.1191074516508444 1.046513193067662 1.0 10.191922813159447 -6.069260300456301 5.83001214255742 1.041231868976324 0.9120414075945407 0.22450798903925318 0.08958916317851146 0.2075159940018801 13.148443661438248 0.012062122905899027 0.03300047600071963 8.525889497651998e-07 6.069260300456301 -0.12919046138178336 FSVS(ph)PVVR ddPTM_A549_PD325901_60min_R1 2 FSVSPVVR 8 0 P13639 P13639 EEF2 Elongation factor 2 1 FS(0.012)VS(0.988)PVVR;FS(0.025)VS(0.975)PVVR 88.819 0.0026759 11182900.0 1351.51 1509.81 1364.6599999999999 1515.3400000000001 1530.87 1589.73 1485.08 1406.31 1958.94 1655.26 1474.05 True False 1488.7143002709242 1637.046987378655 1457.2740339672214 1608.9391102131635 1423.3469724147947 1576.7837659533025 1541.595532066957 1378.2600438211477 1876.6125641973515 1550.746601111561 1292.7511947728315 1.151586095058708 1.2663279631826796 1.127265664003738 1.2445852819311407 1.1010215872706366 1.219711706575048 1.192492057481992 1.0661448617445233 1.4516424906705416 1.1995708125290618 1.0 10.336228922836352 FSVSPVVR ddPTM_A549_MK2206_60min_R1 2 FSVSPVVR 8 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 120.46 0.0033265 10163700.0 4254.8 3871.4 4184.1 3565.8999999999996 5535.9 4195.3 4168.2 4413.4 5826.6 5446.6 5961.5 False True 4972.906220127359 4068.4377239136347 4777.468295840178 4439.545660079335 4721.576443362387 4639.243861385244 4925.507985945287 5039.012965470646 4506.884403168256 4216.209277172016 4481.095020970157 1.1097524593555093 0.9079115048608851 1.0661385829765013 0.9907278554245372 1.053665771706882 1.0352924541155675 1.0991750817368107 1.1245048234615878 1.0057551518272683 0.9408881662721821 1.0 12.129635603616011 -4.894467955469746 20.08404388667441 1.0200455849692074 12.922763305063478 0.14379656278132935 0.06102613323215931 763.4915269465213 144777.64709941676 0.007509227609816228 1505.333673199326 1.2750641774117895e-05 4.894467955469746 11.902717720094271 FSVSPVVR ddPTM_A549_PD325901_60min_R1 2 FSVSPVVR 8 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 129.55 0.0029586 16890800.0 5736.3 5861.5 5941.2 5494.799999999999 7091.6 6697.8 6054.200000000001 6518.4 6957.8 6159.9 6913.1 False True 6318.6449531591325 6355.469175936037 6344.405559337902 5834.201316403768 6593.510480691865 6643.25533744851 6284.595893985361 6388.3853984141215 6665.387862401267 5770.962862744892 6062.8325257515435 1.0421935500149542 1.0482673154736726 1.046442489115507 0.9622897039664748 1.0875297070612286 1.0957345942233523 1.0365775183945607 1.053696497681539 1.099385119758859 0.9518591909364227 1.0 12.565776255937315 FT(ph)DTRKDEQER ddPTM_A549_MK2206_60min_R1 1 FTDTRKDEQER 11 2 P13639 P13639 EEF2 Elongation factor 2 1 FT(0.991)DT(0.009)RKDEQER 60.55 0.0028524 8777300.0 1696.9 7319.8 1937.4 1083.1 2039.7 1694.6 1147.3 1299.4 1632.7 1663.3 1841.2 True False 1983.2952347781613 7692.346554606353 2212.152452465467 1348.459548622207 1739.6628319742513 1873.9214472155588 1355.749559108254 1483.5939292456053 1262.8960568861446 1287.5593747879811 1383.9792254651109 1.4330382987588846 5.558137299366761 1.598400042256439 0.9743351083677092 1.2570006832216767 1.35400980934941 0.9796025360515295 1.0719770224491751 0.9125108481752867 0.9303314320742596 1.0 10.43460657189727 -5.978728073115673 24.724795084001364 1.0270912650126123 3.516260501238267 0.5215955982767414 0.8892840774979797 93.51765170032027 108695.97109503509 0.1014378308064836 0.31534224667958194 1.050199789457489e-06 5.978728073115673 2.4891692362256546 FT(ph)DTRKDEQER ddPTM_A549_PD325901_60min_R1 2 FTDTRKDEQER 11 2 P13639 P13639 EEF2 Elongation factor 2 1 FT(0.995)DT(0.005)RKDEQER;FT(0.87)DT(0.13)RKDEQER 62.357 0.002523 31573000.0 9703.6 8158.9 4787.7 4313.0 13350.900000000001 9446.8 6126.2 5357.5 5554.4 5053.6 5907.4 True False 10688.702328587233 8846.479136662037 5112.622112778907 4579.404214466308 12413.178842104613 9369.868392876555 6359.335893385271 5250.640459622556 5320.967883946304 4734.514833547226 5180.827250093976 2.0631265650467983 1.7075418093706116 0.9868350875212387 0.883913705940155 2.395983931307389 1.8085660726685286 1.2274749931625144 1.0134753015606366 1.027049856535901 0.9138530595594258 1.0 12.338966763716634 -7.951648412396848 4.559637671126319 1.0166176930994857 1.612552149440125 0.3643122016899103 0.40457027611309554 0.19215769397172833 8.705792617590747 0.06564807635248683 0.09076958798216904 1.1177677820971972e-08 7.951648412396848 0.5959344563406392 FT(ph)PVASK ddPTM_A549_MK2206_60min_R1 1 FTPVASK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FT(0.999)PVAS(0.001)K 54.982 0.043601 2367900.0 1932.5 2167.7 2292.9 2100.9 3060.2 2164.8 1952.9 2349.4 3122.5 3105.0 3353.4 True False 2258.6587549111878 2278.026671004699 2618.067698078906 2615.620594312984 2610.048633822427 2393.8776991220593 2307.7166512529498 2682.4346447357443 2415.25873560788 2403.578343483845 2520.6582308682923 0.8960591036306998 0.9037427776235996 1.0386444564430533 1.0376736371007267 1.0354631190613026 0.949703402788342 0.9155214391988435 1.0641802255800956 0.9581857254705629 0.9535518596092589 1.0 11.299584805057332 -5.703041027992478 10.398857906650495 0.989546238514119 0.8994698467888288 0.3981861112314885 0.04460871990807524 0.362920361553721 62.05922795001555 0.006015926644660754 0.0233175866105954 1.9813398389093715e-06 5.703041027992478 -0.09007639172529025 FT(ph)SIRREDR ddPTM_A549_MK2206_60min_R1 2 FTSIRREDR 9 2 F5H6B2;Q9UHN6-2;Q9UHN6 F5H6B2 TMEM2 Transmembrane protein 2 1 FT(0.5)S(0.5)IRREDR;FT(0.5)S(0.5)IRREDR 65.395 0.010923 45090000.0 5260.4 7321.200000000001 6231.3 4362.4 7668.6 4986.3 4453.1 4209.3 8469.3 7974.1 6995.1 True False 6148.226915567821 7693.817808626469 7114.992039355871 5431.188195835578 6540.559098532992 5513.946956361941 5262.170628139949 4805.981165440611 6551.01707269298 6172.745271747029 5258.023615061369 1.169303785163023 1.4632528059759713 1.3531685211483837 1.0329333973088646 1.2439196887206552 1.0486729159160662 1.0007887018739705 0.9140280678226885 1.245908644063121 1.1739668216904695 1.0 12.360304906126494 -6.2539124570275915 24.507298947787103 1.0956213082098545 1.3420428421476491 0.4603105195990611 0.11778942304903885 330.0309216896368 1074560.08023494 0.017880391056365404 0.04629879922282411 5.572980750497919e-07 6.2539124570275915 0.24642153393779465 FT(ph)SIRREDR ddPTM_A549_PD325901_60min_R1 1 FTSIRREDR 9 2 F5H6B2;Q9UHN6-2;Q9UHN6 F5H6B2 TMEM2 Transmembrane protein 2 1 FT(0.5)S(0.5)IRREDR 64.64 0.011562000000000001 47209000.0 2745.6 3854.5 4310.6 5254.2 4804.1 5676.7 5120.8 5317.7 4867.2 4557.6 5898.1 True False 3024.331290796108 4179.332242368928 4603.143237743546 5578.740000846012 4466.676589245272 5630.470837303888 5315.674846209284 5211.634301845054 4662.648510143929 4269.83235819512 5172.671091136418 0.5846749653150038 0.8079640419299776 0.8898967586845448 1.0785027508138705 0.8635145190072309 1.0885035483798553 1.0276460174160134 1.0075325127042005 0.9014005391012715 0.8254598606726902 1.0 12.33669374408075 -5.360742240015177 1.5241303665756456 0.9716516194518713 0.48399291671410904 0.6721666057959693 0.08048565029980617 0.3450898625801508 0.8457284483287334 0.009934634969848113 0.23702185174167445 4.3577043293153645e-06 5.360742240015177 -0.48765870273776224 FTASAGIQVVGDDLTVTNPK ddPTM_A549_MK2206_60min_R1 1 FTASAGIQVVGDDLTVTNPK 20 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 207.72 7.059199999999998e-99 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FTASAGIQVVGDDLTVTNPK ddPTM_A549_PD325901_60min_R1 1 FTASAGIQVVGDDLTVTNPK 20 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 210.1 6.301099999999999e-66 4654500.0 2492.4 2611.7 3298.9 2252.0 2631.2 2883.7 2773.7 2980.5 3287.6 3389.5 3074.5 False True 2745.426613192096 2831.797124761948 3522.7831918972247 2391.1009253369166 2446.3935891472206 2860.216103287687 2879.2546713268785 2921.0515893429815 3149.4336049369626 3175.4863915443098 2696.3559908612788 1.0181988663578294 1.050231176580436 1.3064978080924565 0.8867897760685315 0.9072962166118821 1.0607709490073927 1.0678318000610807 1.0833330610806808 1.1680333070304119 1.1776955277073728 1.0 11.396795267956762 -7.681322996891944 4.094272048202927 1.0810596851344514 1.0370994644580358 0.06084080388145208 0.11136045502807213 0.7973018217824402 25.635580084166588 0.018248972788223586 0.02721032115928575 2.0829411655747873e-08 7.681322996891944 -0.043960220676415585 FTATMS(ph)TPDKK ddPTM_A549_MK2206_60min_R1 1 FTATMSTPDKK 11 1 H0Y322;Q5TKA1;Q5TKA1-2;B1B047;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 FTAT(0.001)MS(0.5)T(0.5)PDKK 118.37 6.5925e-06 17018000.0 6484.1 6889.1 7107.7 6481.3 9146.8 7174.7 7064.8 7427.6 9875.5 9553.5 10609.0 True False 7578.457558975233 7239.72576427479 8115.678737683905 8069.218790956612 7801.317836692687 7933.921991819584 8348.38271174757 8480.485046071002 7638.715017932951 7395.357714806091 7974.492506495417 0.9503372851378813 0.9078603758644025 1.017704729307036 1.0118786599127203 0.9782839259474286 0.9949124643802991 1.046885767959229 1.063451378148947 0.9578935602122685 0.9273765959128301 1.0 12.961176993927182 -5.760456853468184 24.999058405043346 0.9946141182577892 0.9290988223917213 0.3406483535815572 0.03737930924517574 21.15521864164853 538179.846104989 0.00494239495186183 0.01719094617912757 1.7359737207956358e-06 5.760456853468184 -0.06551529586606797 FTATMS(ph)TPDKK ddPTM_A549_PD325901_60min_R1 2 FTATMSTPDKK 11 1 H0Y322;Q5TKA1;Q5TKA1-2;B1B047;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 FT(0.01)AT(0.075)MS(0.488)T(0.427)PDKK;FT(0.006)AT(0.08)MS(0.517)T(0.397)PDKK 42.788999999999994 0.019659 60945000.0 10547.900000000001 10728.900000000001 10753.8 10225.099999999999 12827.9 10560.8 9973.599999999999 11361.7 10725.2 10875.7 11315.7 True False 11618.715043046423 11633.062056077828 11483.617535852676 10856.681204113018 11926.912557852553 10474.79634622208 10353.15080576333 11135.081980418781 10274.45714188767 10189.006445941426 9923.940636132378 1.1707763547822414 1.1722220519661974 1.157163062225667 1.093988930625461 1.2018323159277569 1.0555077594966735 1.043249973510344 1.1220423810151303 1.0353202944885709 1.0267097335149267 1.0 13.276697389883001 -7.571101909991671 0.3201829731571816 0.9944381554944929 1.2029246848958552 0.6670144467098977 0.038552510274770885 0.6949520208742312 0.1497201466354812 0.01994181552696802 0.05174272633431618 2.6847143862505187e-08 7.571101909991671 0.20848652940136236 FTATMST(ph)PDKK ddPTM_A549_MK2206_60min_R1 3 FTATMSTPDKK 11 1 H0Y322;Q5TKA1;Q5TKA1-2;B1B047;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 FT(0.002)AT(0.048)MS(0.319)T(0.63)PDKK;FTAT(0.003)MS(0.234)T(0.764)PDKK;FTAT(0.001)MS(0.026)T(0.974)PDKK 74.987 0.00083957 88889000.0 14698.9 18685.7 18294.199999999997 16622.5 23202.5 17835.899999999998 17057.699999999997 18271.2 24758.8 26184.1 22867.2 True False 17179.714966397958 19636.722316922307 20888.592647823745 20695.013246212384 19789.44298616589 19723.28309948777 20156.86329155483 20861.198553203245 19150.971331679222 20269.093624352776 17188.643137386363 0.9994805773255606 1.1424242251100798 1.2152554730972198 1.2039934205859129 1.1513092003825844 1.1474601538843057 1.1726849600892815 1.2136617408635848 1.1141642291720324 1.1792142906420717 1.0 14.069168043258653 -9.917007579212557 0.7953287942283319 1.0097854979361136 1.1582136746618823 0.0 0.07622103881883031 0.34688335780160134 0.4498466523749393 0.02497165317728853 0.012109940066010363 1.210577006640299e-10 9.917007579212557 0.1484281767257687 FTATMST(ph)PDKK ddPTM_A549_PD325901_60min_R1 4 FTATMSTPDKK 11 1 H0Y322;Q5TKA1;Q5TKA1-2;B1B047;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 FT(0.001)AT(0.014)MS(0.256)T(0.728)PDKK;FT(0.001)AT(0.041)MS(0.175)T(0.783)PDKK;FTATMS(0.019)T(0.981)PDKK;FTATMS(0.013)T(0.987)PDKK 113.35 1.8607e-05 121427000.0 31362.800000000003 30196.800000000003 33281.9 35182.2 41986.5 42091.0 38042.0 39693.0 38627.1 35779.3 38709.5 True False 34546.728367926946 32741.59031167881 35540.60987432305 37355.324589426506 39037.513085561644 41748.22485122658 39489.70912738116 38901.2919764439 37003.73731635859 33520.188891866455 33948.47689973806 1.0176223360463486 0.9644494628838985 1.0468985097413095 1.1003534768216576 1.1499046982535717 1.2297525150988056 1.1632247668727034 1.1458921144336833 1.0899969805904342 0.9873841760519481 1.0 15.051059228879943 -5.962437405891748 4.634259483536216 1.0833109682862219 0.9920130913599757 0.2522333887756245 0.07014940450434526 0.27589896550430004 13.756445450854434 0.011620320456045342 0.03735058792964201 1.0903416301034363e-06 5.962437405891748 -0.09129787692624614 FTDEES(ph)RVFLLDR ddPTM_A549_MK2206_60min_R1 1 FTDEESRVFLLDR 13 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FTDEES(1)RVFLLDR 109.35 1.7879e-05 2141900.0 380.27 398.46 534.55 315.43 518.74 487.87 303.11 324.31 346.82 542.05 515.63 True False 444.4502792911136 418.7399120397341 610.3572279681091 392.7103641601909 442.43403317072307 539.496079578104 358.1811634806092 370.2819356577205 268.2658237577343 419.6005285299255 387.584840335963 1.1467173971661506 1.0803825858533722 1.5747706423167749 1.0132242628988921 1.141515320328876 1.3919431913551172 0.9241361534422596 0.95535711700374 0.6921473593373735 1.0826030454808575 1.0 8.59836833328355 -7.889396878930246 6.183575055727944 0.8618973538167481 1.219907840946247 0.3906443670109413 0.17456546566498066 0.13787424593877176 7.0753915500415125 0.027432798264219394 0.03806638597008408 1.2900398350929614e-08 7.889396878930246 0.3580104871294988 FTDEES(ph)RVFLLDR ddPTM_A549_PD325901_60min_R1 3 FTDEESRVFLLDR 13 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 FT(0.001)DEES(0.999)RVFLLDR;FT(0.007)DEES(0.993)RVFLLDR;FTDEES(1)RVFLLDR 78.285 0.00023718 6141900.0 868.38 694.6500000000001 1193.98 866.63 984.88 1010.85 769.07 906.29 975.8500000000001 954.71 838.4300000000001 True False 956.5372983324314 753.1905933743873 1275.0106627850041 920.1597668404665 915.7054264515486 1002.6179727462496 798.3373797012518 888.2133349792492 934.8384181097875 894.4294476681722 735.3084252456734 1.3008654130582595 1.0243192754424637 1.7339807610106073 1.2513929328812363 1.2453351478267134 1.3635339108364841 1.0857177101357431 1.2079466309426399 1.2713555101690142 1.2164003797037073 1.0 9.522205705355487 -14.416511936535194 0.19418989507081713 0.0006939831744872325 1.3345954399661903 0.08173536128579717 0.18119469915017197 36.48584591538902 0.5165637891389375 13.992140900330474 0.15615003842666456 3.832552065288472e-15 14.416511936535194 1.3339014567917031 FTDKDQQPS(ph)GS(ph)EGEDDDAEAALKK ddPTM_A549_MK2206_60min_R1 2 FTDKDQQPSGSEGEDDDAEAALKK 24 2 Q9NXG2;H3BNW0 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 2 FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FT(0.003)DKDQQPS(0.998)GS(0.999)EGEDDDAEAALKK 70.21300000000001 4.3593999999999996e-05 8116100.0 2148.69 2548.1 2333.87 1986.7399999999998 3519.5 2426.59 2073.85 2520.6 3098.4 3214.8999999999996 3576.8999999999996 True False 2511.3363415731537 2677.7874061849298 2664.8478601401757 2473.4913891881474 3001.7862122534593 2683.3701431599216 2450.64170065079 2877.902769013753 2396.6173471280904 2488.651857154981 2688.6570125820954 0.9340486085881781 0.9959572357700148 0.9911445928839193 0.9199728256943751 1.1164630513323248 0.9980336393234864 0.9114742747708368 1.0703867230167499 0.8913808402903947 0.9256115025117926 1.0 11.392670009449805 -8.780673477827712 24.999882904887833 0.9487076352239302 0.9915163121570827 0.11997340595042316 0.06264838243321445 480.84607726046653 624986.3417593691 0.011432005600517417 0.012179584202089826 1.6570153140775468e-09 8.780673477827712 0.04280867693315249 FTDKDQQPS(ph)GS(ph)EGEDDDAEAALKK ddPTM_A549_PD325901_60min_R1 3 FTDKDQQPSGSEGEDDDAEAALKK 24 2 Q9NXG2;H3BNW0 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 2 FT(0.007)DKDQQPS(0.996)GS(0.996)EGEDDDAEAALKK;FT(0.002)DKDQQPS(0.999)GS(0.999)EGEDDDAEAALKK;FT(0.006)DKDQQPS(0.997)GS(0.997)EGEDDDAEAALKK 68.934 5.662e-05 31763900.0 4960.249999999999 5760.43 5704.88 6413.01 6507.17 6121.47 6082.38 6745.49 6628.860000000001 6824.2 6565.2699999999995 True False 5463.810928456948 6245.8816523308415 6092.047463030293 6809.127062697558 6050.128827717821 6071.618777886909 6313.848299306049 6610.945910215468 6350.2720666816 6393.318847374746 5757.783410675504 0.9489434629177782 1.0847719003723473 1.0580542942506366 1.1825952067027667 1.0507739517433532 1.0545062821622506 1.0965762080594323 1.1481755110756886 1.102902213186339 1.1103784896668563 1.0 12.49129780502898 -10.767493168557674 1.0699572431609432 1.0010297802691808 1.084642262444758 0.0 0.06503398518552678 0.5862680271893284 1.2145722945983817 0.035617705985357795 0.009503445142919092 1.7080745878228217e-11 10.767493168557674 0.08361248217557726 FTDKDQQPS(ph)GSEGEDDDAEAALKK ddPTM_A549_MK2206_60min_R1 2 FTDKDQQPSGSEGEDDDAEAALKK 24 2 Q9NXG2;H3BNW0 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 1 FTDKDQQPS(0.923)GS(0.077)EGEDDDAEAALKK;FTDKDQQPS(0.984)GS(0.016)EGEDDDAEAALKK 140.46 2.976e-25 65709000.0 6375.9 7921.6 7308.200000000001 6136.8 9935.4 7613.4 6862.5 7504.6 11036.4 10129.7 10707.4 True False 7451.996044211248 8324.775604110728 8344.612652579806 7640.3162754914165 8473.915821344797 8419.0449346341 8109.3274203611945 8568.400031873616 8536.673021509314 7841.393734617814 8048.4570707935745 0.9258912582454123 1.0343318639692898 1.0367965659978393 0.9492895605067923 1.0528621506965772 1.0460445847671005 1.0075629836914342 1.0646015697799796 1.0606595707004998 0.9742729153731643 1.0 12.974496522589183 -6.7866761081076845 24.999190814782406 1.0331402930729892 0.9935753936343159 0.1994120782234019 0.03999089200630817 277.9606281451413 275343.507797066 0.005476584183221139 0.010352736095088017 1.6342703137557222e-07 6.7866761081076845 -0.03956489943867325 FTDKDQQPS(ph)GSEGEDDDAEAALKK ddPTM_A549_PD325901_60min_R1 2 FTDKDQQPSGSEGEDDDAEAALKK 24 2 Q9NXG2;H3BNW0 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 1 FTDKDQQPS(0.817)GS(0.183)EGEDDDAEAALKK;FTDKDQQPS(0.909)GS(0.091)EGEDDDAEAALKK 160.26 4.2261e-34 65539200.0 4109.4 4530.97 4824.3 5105.6 5181.0 4993.04 5214.200000000001 6019.7 4172.0 5749.0 5559.2 True False 4526.583262819613 4912.810743340598 5151.706008872588 5420.961316341102 4817.104433479687 4952.378337677135 5412.629234319721 5899.632361136708 3996.665348520809 5386.007158869524 4875.4536426723125 0.928443503841526 1.0076622819959393 1.0566618793751585 1.1118885982002258 0.9880320451245962 1.0157779564001062 1.1101796121997325 1.2100683943541768 0.8197525074467069 1.1047191817656927 1.0 12.251320747131482 -8.778422988651485 24.99563434307603 0.9148831415877963 1.0525448722083692 0.025057974212536194 0.09859738665262675 213.636793789285 314418.8045308578 0.01637304331667028 0.01745220333614596 1.665624158708333e-09 8.778422988651485 0.13766173062057296 FTDKDQQPSGS(ph)EGEDDDAEAALKK ddPTM_A549_PD325901_60min_R1 2 FTDKDQQPSGSEGEDDDAEAALKK 24 2 Q9NXG2;H3BNW0 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 1 FTDKDQQPS(0.092)GS(0.908)EGEDDDAEAALKK;FTDKDQQPS(0.45)GS(0.55)EGEDDDAEAALKK 144.55 2.0962e-28 62781000.0 6467.900000000001 6249.5 7160.9 6472.3 7143.1 6636.5 7358.0 6574.2 7293.0 7269.5 8080.5 True False 7124.516446583679 6776.167297622156 7646.881735989826 6872.079271340199 6641.393298357219 6582.454544324565 7638.012716452096 6443.072423639869 6986.500572090662 6810.502529379372 7086.649726509862 1.0053433881361689 0.9561876992838735 1.0790545647238974 0.9697218765636186 0.9371696859113805 0.9288528145677646 1.0778030538012462 0.9091845473238944 0.9858679124432296 0.9610327576799127 1.0 12.790888027036527 -3.8217479844611875 0.0011573744980408259 1.8199240687328158 0.1451493207634743 0.0 0.053511318416018853 3615987.336403604 439.9079601856882 314364.62628639705 322248.7637732445 0.00015074815847285677 3.8217479844611875 -1.6747747479693413 FTGLS(ph)KEELLK ddPTM_A549_MK2206_60min_R1 2 FTGLSKEELLK 11 1 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2;F5H867;F5GZR9 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 1 FT(0.054)GLS(0.946)KEELLK;FT(0.007)GLS(0.993)KEELLK 73.887 0.00040643 22570000.0 2551.5 2743.8 2660.6 2395.7 3622.9 2778.5 2812.3999999999996 2659.7 3484.9 4045.8 3739.2 True False 2982.1308218141776 2883.447700282644 3037.913087142367 2982.646607547058 3089.97620922661 3072.519025780968 3323.3766757047465 3036.720619989638 2695.575714241763 3131.8509700698673 2810.653443329971 1.061009790762765 1.025899406817807 1.0808565155379477 1.0611933017303317 1.099380009499039 1.0931689330367058 1.1824213631145208 1.080432248663083 0.9590565925652264 1.1142785950726646 1.0 11.456689863456209 -8.75169066952695 23.876692837175643 0.9806656137076578 1.0865335036157617 0.06720813603417064 0.05488523083999632 58.30165083177175 142792.78421473835 0.006890951966408441 0.007761835448804323 1.771370184763949e-09 8.75169066952695 0.10586788990810392 FTGLS(ph)KEELLK ddPTM_A549_PD325901_60min_R1 2 FTGLSKEELLK 11 1 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2;F5H867;F5GZR9 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 1 FTGLS(1)KEELLK;FTGLS(1)KEELLK 92.935 8.1396e-05 37200000.0 3916.2999999999997 4313.4 4433.9 4164.9 5064.4 4161.5 4788.0 4821.9 5028.799999999999 4771.9 5522.6 True False 4313.87989297232 4676.905355878616 4734.811117206676 4422.156413825811 4708.694015231523 4127.610123740928 4970.209960094136 4725.723421792629 4817.457024123067 4470.601419622449 4843.355210645795 0.890680056562922 0.9656333579661227 0.9775890702378102 0.9130357410304782 0.9721967129071426 0.8522212276870291 1.0261915023637977 0.9757127479325471 0.9946528418015257 0.9230381058560344 1.0 12.24179109843062 -7.802543334060993 24.9999954310804 0.9973903802059533 0.9337507485945038 0.2652635003195627 0.04284186889416366 98.9884307771503 60205.813740865335 0.005194967908669716 0.007177919659286328 1.575638797089126e-08 7.802543334060993 -0.06363963161144948 FTGLSKEELLK ddPTM_A549_PD325901_60min_R1 1 FTGLSKEELLK 11 1 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2;F5H867;F5GZR9 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 93.345 4.1444e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FTGS(ph)FDDDPDPHRDPYGEEVDR ddPTM_A549_MK2206_60min_R1 2 FTGSFDDDPDPHRDPYGEEVDR 22 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 FT(0.173)GS(0.827)FDDDPDPHRDPYGEEVDR;FT(0.147)GS(0.853)FDDDPDPHRDPYGEEVDR 95.366 3.7317e-07 10521000.0 417.28 944.37 644.45 664.0899999999999 843.8499999999999 571.3199999999999 442.34000000000003 667.94 1056.22 696.27 854.78 True False 487.7066624834876 992.4343992695979 735.8427005220244 826.7920798121331 719.7207828413351 631.7767031884769 522.7074522582977 762.62254048046 816.9878564367516 538.9821234194837 642.5145352721413 0.7590593452907898 1.5446100357079793 1.1452545586542309 1.2868068104668478 1.120162647427879 0.9832877989614408 0.8135340503026932 1.1869343004939898 1.271547664039555 0.8388637047583589 1.0 9.327585281789938 -11.174876598084897 1.5957383567695724 1.0003158011722284 1.1509679077783173 0.08191517948226767 0.21620889385972858 0.9487841778625212 4.353972056610283 0.14775223629004028 0.03148289120406113 6.685338500712717e-12 11.174876598084897 0.15065210660608885 FTGS(ph)FDDDPDPHRDPYGEEVDR ddPTM_A549_PD325901_60min_R1 2 FTGSFDDDPDPHRDPYGEEVDR 22 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 FT(0.034)GS(0.966)FDDDPDPHRDPYGEEVDR;FT(0.029)GS(0.971)FDDDPDPHRDPYGEEVDR 127.53 5.3254e-22 19700400.0 2066.24 2662.6 2353.1 3336.3 3070.3 2616.35 1953.22 2338.9 3619.8 3001.8999999999996 3260.0 True False 2276.003163714507 2886.986646395512 2512.795516339797 3542.375673712945 2854.6527199599836 2595.0433130480787 2027.5508559429948 2292.248804668446 3467.6723941935825 2812.359521692542 2859.040666842666 0.7960723294740587 1.009774600227603 0.878894639548713 1.239008494980559 0.9984652380312142 0.9076622599824269 0.7091717440249239 0.8017545295009229 1.2128797027651408 0.983672444505074 1.0 11.481315425594715 -8.763706724991424 24.999774391407286 1.1005265213933006 0.9255129528067421 0.16013713540326502 0.14411225282151785 69.46065201980288 765871.9519755113 0.026814357068553927 0.029222369217841288 1.723031729446898e-09 8.763706724991424 -0.1750135685865586 FTGS(ph)FDDDPDPHRDPYGEEVDRR ddPTM_A549_MK2206_60min_R1 4 FTGSFDDDPDPHRDPYGEEVDRR 23 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 FT(0.011)GS(0.989)FDDDPDPHRDPYGEEVDRR;FT(0.018)GS(0.982)FDDDPDPHRDPYGEEVDRR;FT(0.044)GS(0.956)FDDDPDPHRDPYGEEVDRR;FT(0.019)GS(0.981)FDDDPDPHRDPYGEEVDRR 225.95 2.7309e-88 200281000.0 4437.76 6942.25 5359.49 4389.110000000001 7634.05 5741.159999999999 5009.579999999999 5238.370000000001 7970.96 7449.92 7937.1900000000005 True False 5186.745395184821 7295.580872252785 6119.546272047146 5464.442147034639 6511.0913577648835 6348.685740526422 5919.755840946161 5980.924989335311 6165.550287007523 5766.977897805848 5966.166667700099 0.8693597889688627 1.222825522416249 1.0257082332576157 0.9159050444598339 1.0913358141694098 1.064114714544805 0.9922209972769953 1.002473669016843 1.0334190495191586 0.9666136095438587 1.0 12.542588565269478 -14.99999999754745 0.20471441818872824 0.8588310744832559 1.0346466175319697 0.020735785385081362 0.08756249583533929 212.6082827182779 2.530699041221026 12.08280943786809 0.06614576976540164 1.0000000056472054e-15 14.99999999754745 0.17581554304871383 FTGS(ph)FDDDPDPHRDPYGEEVDRR ddPTM_A549_PD325901_60min_R1 4 FTGSFDDDPDPHRDPYGEEVDRR 23 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 FT(0.047)GS(0.953)FDDDPDPHRDPYGEEVDRR;FT(0.019)GS(0.981)FDDDPDPHRDPYGEEVDRR;FT(0.024)GS(0.976)FDDDPDPHRDPYGEEVDRR;FT(0.009)GS(0.991)FDDDPDPHRDPYGEEVDRR 207.55 7.3231e-63 409174000.0 11559.92 11594.13 11700.900000000001 10915.259999999998 14751.240000000002 11352.71 11553.44 11100.93 12897.300000000001 13144.160000000002 14598.230000000001 True False 12733.474568436674 12571.20802470277 12494.993437227637 11589.470819845927 13715.163791415353 11260.257293739009 11993.112481484957 10879.513242638883 12355.271332568893 12314.235494403616 12802.740255804474 0.9945897764085 0.9819154160378492 0.9759624258222913 0.905233613139306 1.071267831525146 0.8795193113938137 0.9367613684146681 0.8497800490567913 0.9650489727749723 0.9618437341037689 1.0 13.644165012458194 -9.751384070520741 1.5129793773021731 0.992194661799879 0.9504808450899068 0.030320553488307755 0.057857759607476446 0.6452535051846563 2.9689354212743924 0.01429827780133658 0.01022529542995344 1.7726211610309521e-10 9.751384070520741 -0.04171381670997221 FTLPTDHALAEKT(ph)SHV ddPTM_A549_MK2206_60min_R1 2 FTLPTDHALAEKTSHV 16 1 Q658P3-3;Q658P3;Q658P3-2 Q658P3-3 STEAP3 Metalloreductase STEAP3 1 FTLPTDHALAEKT(0.5)S(0.5)HV;FTLPTDHALAEKT(0.5)S(0.5)HV 56.648 0.0056696 13822800.0 1868.9099999999999 1816.83 2294.22 2034.46 2543.3 1886.27 1920.6599999999999 2009.02 2998.7 2779.8 3296.7 True False 2184.3363175374216 1909.2988866916387 2619.574893927597 2532.9027913303803 2169.183939089138 2085.8738393953113 2269.6190605742686 2293.804737365712 2319.499237939906 2151.841249345055 2478.038405708686 0.8814779918282706 0.7704880127334446 1.057116341656712 1.0221402483090265 0.8753633253189151 0.8417439514214387 0.9158934160768941 0.9256534249354035 0.9360223120821891 0.868364769645149 1.0 11.274982831824255 -9.975611369212727 0.5775320168107679 1.0011628462538114 0.9103772639549974 0.0 0.08361613377400162 1.240677281401473 0.8178895417553047 0.05218659946207646 0.018981593274738334 1.0577636313874711e-10 9.975611369212727 -0.09078558229881395 FTLPTDHALAEKT(ph)SHV ddPTM_A549_PD325901_60min_R1 2 FTLPTDHALAEKTSHV 16 1 Q658P3-3;Q658P3;Q658P3-2 Q658P3-3 STEAP3 Metalloreductase STEAP3 1 FTLPTDHALAEKT(0.5)S(0.5)HV;FTLPTDHALAEKT(0.543)S(0.457)HV 63.488 0.0013262 19404500.0 4157.2 4078.1 4262.6 4309.0 4881.200000000001 5450.4 4636.1 4864.7 5132.6 5252.8 5152.2 True False 4579.23588363111 4421.775799093196 4551.885669096095 4575.157143550967 4538.361351225837 5406.0137494743585 4812.529322471262 4767.669742216675 4916.894671097295 4921.137311551542 4518.512062486743 1.013438897651398 0.9785911242338681 1.0073859726714958 1.0125362243767142 1.0043928816532073 1.1964145884119168 1.065069486574018 1.055141532496609 1.0881667688613637 1.0891057152214871 1.0 12.141632058746133 FTLPTDHALAEKTS(ph)HV ddPTM_A549_PD325901_60min_R1 2 FTLPTDHALAEKTSHV 16 1 Q658P3-3;Q658P3;Q658P3-2 Q658P3-3 STEAP3 Metalloreductase STEAP3 1 FTLPTDHALAEKT(0.227)S(0.773)HV;FTLPTDHALAEKT(0.448)S(0.552)HV 72.968 0.00019471 16610900.0 4359.7 4275.9 4837.8 4710.0 5208.5 5747.799999999999 4976.3 5130.6 5457.8 5013.9 5128.4 True False 4802.293534558491 4636.2450992723525 5166.122200054686 5000.926002813889 4842.67292834954 5700.991822477013 5165.675819635848 5028.266158122161 5228.427646010758 4697.321498322471 4497.639311606109 1.0677364728127987 1.0308174529043654 1.14862972375832 1.1119001894858607 1.0767143812206272 1.267552026185307 1.1485304760445947 1.1179789684661408 1.1624826456223063 1.0443971098796394 1.0 12.134952253420792 -4.2304820693400105 16.15220280233656 1.0990645575274807 1.1085236887759309 0.0 0.07184385539121153 0.0 0.0 0.01088638309889689 0.0 5.881903981824691e-05 4.2304820693400105 0.009459131248450214 FTPVASKFS(ph)PGAPGGSGSQPNQK ddPTM_A549_MK2206_60min_R1 2 FTPVASKFSPGAPGGSGSQPNQK 23 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FTPVAS(0.039)KFS(0.961)PGAPGGSGSQPNQK;FTPVAS(0.065)KFS(0.933)PGAPGGS(0.002)GS(0.001)QPNQK 98.32600000000001 5.4903000000000005e-08 256840000.0 4794.2 5964.4 5612.0 5484.6 7357.9 5788.5 5322.5 5132.3 8057.200000000001 8034.200000000001 8052.2 True False 5603.343753063502 6267.962483987832 6407.865987011561 6828.327246213051 6275.562656951188 6401.035227904678 6289.529354444071 5859.81924200956 6232.257064704505 6219.268640005764 6052.616510585579 0.9257721422237255 1.0355789885292797 1.058693537878152 1.1281612232116163 1.0368346724058417 1.057564974868264 1.0391422194755193 0.9681464589341104 1.0296798176135475 1.0275338986252842 1.0 12.563343230489139 -8.027996252163605 24.139113547386753 1.0106182071375187 1.0451580176122088 0.10105680039554066 0.046910727097768196 820.8120131588266 707725.4392886058 0.007451651041358109 0.009634341012045217 9.375700978510931e-09 8.027996252163605 0.034539810474690125 FTPVASKFS(ph)PGAPGGSGSQPNQK ddPTM_A549_PD325901_60min_R1 2 FTPVASKFSPGAPGGSGSQPNQK 23 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FTPVAS(0.001)KFS(0.999)PGAPGGSGSQPNQK;FTPVAS(0.005)KFS(0.995)PGAPGGSGSQPNQK 200.14 2.7383e-61 470710000.0 13291.5 12492.800000000001 14238.0 12612.7 14587.9 15969.8 16019.0 15006.1 13275.5 13443.0 14471.9 True False 14640.84329531485 13545.612099485406 15204.276300049312 13391.757833479987 13563.296229522939 15839.74724357031 16628.611810933147 14706.791563442284 12717.576901794824 12594.206685803274 12691.948044932618 1.153553673831839 1.0672602859333025 1.197946623026066 1.0551380911795314 1.0686536205084936 1.2480154494403624 1.3101701765610583 1.158749745222453 1.0020193004865348 0.9922989474284549 1.0 13.631625900191867 -8.762084540002256 19.632709921728136 1.0009534506489357 1.1575216706294753 0.4809622944979879 0.07369847150209906 0.7502588575768011 22813.422852171607 0.013350126361178829 0.014639449247889567 1.729479664984628e-09 8.762084540002256 0.1565682199805396 FTQAGSEVSALLGR ddPTM_A549_MK2206_60min_R1 2 FTQAGSEVSALLGR 14 0 H0YH81;P06576;F8W0P7 H0YH81 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial 0 ; 119.39 7.289099999999999e-06 4033800.0 3323.1000000000004 3168.3 3143.5 2854.2 4145.0 3491.8 3353.2 3024.0 5310.200000000001 4114.6 4979.9 False True 3883.958038005367 3329.5529370965464 3589.295568455249 3553.4791281299053 3535.2759908482963 3861.2999583307505 3962.43303547616 3452.6612606115964 4107.448178646911 3185.1090022861927 3743.253391751957 1.0375888649599423 0.8894810445996053 0.9588705847068901 0.9493023197306898 0.9444394009334428 1.031535820374571 1.058553247879813 0.922369099623161 1.0972936504104789 0.850893238834538 1.0 11.870076996445386 -7.27886611439088 8.105474795668078 1.0369101151599938 0.9520105250937898 0.0 0.07661686451656034 0.17846816282883407 68.98287631609256 0.008283408083328997 0.013492811147169218 5.261794535741972e-08 7.27886611439088 -0.08489959006620396 FTQAGSEVSALLGR ddPTM_A549_PD325901_60min_R1 2 FTQAGSEVSALLGR 14 0 H0YH81;P06576;F8W0P7 H0YH81 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial 0 ; 102.73 7.4418e-05 7681000.0 5806.200000000001 5765.7 5181.2 6295.8 7565.299999999999 6784.2 5974.0 7415.6 7410.0 7102.6 7014.1 False True 6395.641149701476 6251.595773725909 5532.827389086635 6684.677267200781 7033.939426868149 6728.951724494343 6201.343839098238 7267.690040574338 7098.583468969123 6654.1406238627005 6151.410166043289 1.0397032512977884 1.0162866082700288 0.8994404924627976 1.086690220089892 1.1434677963268576 1.0938876684957817 1.0081174351420412 1.1814673130875066 1.153976613062542 1.0817260504907573 1.0 12.586701460374034 -6.314849841373053 23.959467327468573 1.0846323649034648 0.9882576871429444 0.3727992056845625 0.061852845043671126 205.20398087709592 92052.31210369174 0.01046880566523376 0.024327329923714495 4.843398005840165e-07 6.314849841373053 -0.09637467776052044 FTS(ph)IRREDR ddPTM_A549_PD325901_60min_R1 1 FTSIRREDR 9 2 F5H6B2;Q9UHN6-2;Q9UHN6 F5H6B2 TMEM2 Transmembrane protein 2 1 FT(0.123)S(0.877)IRREDR 77.062 0.00063784 44342000.0 4101.9 4857.7 5178.5 4893.6 5685.3 6419.2 5386.2 5697.5 5502.7 5913.9 6092.1 True False 4518.321868340822 5267.075427099633 5529.944150850218 5195.866557828035 5285.984141220244 6366.924163478976 5591.174788441732 5583.858892897719 5271.440655154711 5540.495344727509 5342.810321003742 0.8456826270957669 0.9858248956347228 1.035025355309885 0.9724969156030041 0.9893639907896221 1.1916807412101496 1.0464857355054542 1.0451164382434397 0.9866419240884406 1.0370001949997412 1.0 12.38338308456567 -5.273097338679856 3.2337671972886963 1.0140928448768614 0.8239174584503447 0.4345333005227945 0.05865749563145679 0.25522583066398213 4.24899659692582 0.008376791194305845 0.11951893623855715 5.332153722160284e-06 5.273097338679856 -0.19017538642651666 FTS(ph)PADLDASGAGPGPK ddPTM_A549_PD325901_60min_R1 1 FTSPADLDASGAGPGPK 17 0 P52735-3;P52735-2;P52735 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 FT(0.15)S(0.85)PADLDASGAGPGPK 95.06700000000001 2.4070999999999997e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FTS(ph)SPGLSTEGKR ddPTM_A549_PD325901_60min_R1 1 FTSSPGLSTEGKR 13 1 A0A2R8YEK3;A0A2R8Y6F8;A0A2R8YFN5 A0A2R8YEK3;A0A2R8Y6F8 1 FT(0.103)S(0.53)S(0.367)PGLSTEGKR 58.885 0.004403600000000001 4237600.0 2419.7 2728.8 2737.6 2989.0 2835.3 3244.5 2625.6 3064.7 3024.2 2956.8 3030.9 True False 2665.3461627110055 2958.7655527244315 2923.3899985261296 3173.623741488473 2636.158309253998 3218.0778677105454 2725.518644783448 3003.5721542893607 2897.10339093879 2770.107143389354 2658.118514458109 1.0027190842746792 1.1131052045388627 1.0997967105774813 1.1939361334817895 0.9917384401467939 1.2106600402527918 1.025356330035224 1.1299617146309509 1.0899075324071474 1.0421307884964923 1.0 11.376189714486589 -10.435659056669223 0.6708048008949852 0.9956676867451318 1.0991127970286567 0.1395477636123703 0.06775287838065684 0.8724288005374496 0.6748255163665806 0.04900349828987839 0.012508329358999948 3.667253597918402e-11 10.435659056669223 0.10344511028352488 FTSGAFLS(ph)PSVSVQECR ddPTM_A549_MK2206_60min_R1 2 FTSGAFLSPSVSVQECR 17 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 FTSGAFLS(0.857)PS(0.124)VS(0.019)VQECR;FTSGAFLS(0.561)PS(0.349)VS(0.09)VQECR 62.378 0.0031728000000000004 1767780.0 1397.06 1543.04 1161.29 1275.45 1979.4099999999999 1459.81 1239.67 1427.3400000000001 1995.33 2345.04 2064.9 True False 1632.8495731623414 1621.5741451432805 1325.9783841868593 1587.9353072571269 1688.2414111085718 1614.2861252565467 1464.9019924516072 1629.6698160454225 1543.3909408872623 1815.2938352989875 1552.1283416591943 1.0520068021030127 1.0447423074626998 0.8542968700445317 1.02306959072705 1.0876944681674168 1.040046806651895 0.9438021026570883 1.0499581589389302 0.9943706969730404 1.1695513744427053 1.0 10.600032140009244 -5.5598125576315045 24.99981529109019 0.9990143199002414 1.050192581951394 0.0 0.0773551472523353 241.61814194066167 163546.16129051856 0.0075197697610605 0.02912408149854801 2.7554176905307758e-06 5.5598125576315045 0.05117826205115261 FTSGAFLS(ph)PSVSVQECR ddPTM_A549_PD325901_60min_R1 1 FTSGAFLSPSVSVQECR 17 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 FTSGAFLS(0.756)PS(0.19)VS(0.054)VQECR 102.78 1.5e-08 950780.0 1341.2 1702.2 1487.9 1418.5 1407.3 1423.6 1936.0 1522.7 1340.1 1385.5 1632.4 True False 1477.3576366607442 1845.6503678714205 1588.8778414695441 1506.1175233527604 1308.4561029214372 1412.0066735930761 2009.6755394198499 1492.3285539649594 1283.7802573232818 1298.0192935490902 1431.6251486361864 1.0319444570166458 1.289199459530065 1.1098420860957645 1.0520334354195564 0.9139655755334529 0.9862963604252136 1.4037721685277278 1.0424017455872447 0.8967293278874386 0.9066753924975588 1.0 10.483438076847014 -8.527434847746708 23.604269141211844 0.9521981110187108 1.1128096746338432 0.2583079103549891 0.13107700344926887 70.52469397935808 365370.54255433776 0.022523183301517025 0.025596962780813224 2.9686920691082694e-09 8.527434847746708 0.1606115636151324 FTSGAFLSPSVSVQECRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 FTSGAFLSPSVSVQECRTPR 20 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 FTSGAFLSPS(0.006)VS(0.076)VQECRT(0.918)PR;FTSGAFLSPS(0.004)VS(0.031)VQECRT(0.966)PR 91.238 1.4134e-06 12040300.0 5090.5 5382.2 5618.8 5619.9 6096.6 6560.2 6266.0 6278.6 5771.700000000001 6676.1 6836.6 True False 5607.283812571962 5835.776882832542 6000.125556589203 5967.028459281055 5668.395848128213 6506.775906227375 6504.456058886765 6153.3683975335825 5529.135520627409 6254.569906649648 5995.741540778083 0.9352110617904137 0.9733202879314271 1.0007311882577499 0.9952110875190758 0.9454036351594653 1.0852328877043247 1.0848459718700059 1.0262898018007367 0.9221770956974705 1.0431686996697953 1.0 12.549722478842712 -3.476480482873222 16.511852779845018 0.9830728939743234 0.48323710001665643 0.0 0.05602957686269427 0.0 0.0 0.007864185952967038 0.0 0.00033382550689549525 3.476480482873222 -0.499835793957667 FTSQDAS(ph)TPASSELNKQEK ddPTM_A549_PD325901_60min_R1 1 FTSQDASTPASSELNKQEK 19 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 FTS(0.006)QDAS(0.966)T(0.021)PAS(0.004)S(0.003)ELNKQEK 120.0 1.1037e-14 8086900.0 3321.4 3281.9 2785.2 3157.6 3452.6 3649.2 3156.5 3315.1 3814.9 3868.1 3949.9 True False 3658.586082914551 3558.477230829051 2974.220420768181 3352.6377805700904 3210.101286823385 3619.4821250884015 3276.622334803078 3248.977729854359 3654.5730196721074 3623.867505865923 3464.0873404790905 1.0561471820189616 1.0272481265835827 0.8585870182929165 0.9678271507168216 0.9266802396441371 1.0448587952138122 0.9458832912538269 0.9379029483145245 1.0549887056735332 1.0461247508166853 1.0 11.75825959004068 -8.762631696024005 24.999173183051198 1.0259668884234496 0.9688829629155155 0.19876650474773994 0.05572079878117127 41.09655866605433 861663.7509581771 0.009687193144476492 0.010595299500551537 1.7273021117417929e-09 8.762631696024005 -0.057083925507934175 FTSQQGPIKPVS(ph)PNSSPFGTDYR ddPTM_A549_MK2206_60min_R1 1 FTSQQGPIKPVSPNSSPFGTDYR 23 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 FTSQQGPIKPVS(0.899)PNS(0.034)S(0.041)PFGT(0.026)DYR 76.51 2.7259e-05 5595900.0 1450.1 1556.8 1508.0 1352.2 2256.9 1313.5 1513.9 1774.4 2443.6 1955.5 2467.1 True False 1694.8414284588416 1636.034470369568 1721.857075626057 1683.4890607025636 1924.9129996973516 1452.4936981692658 1788.9560337609912 2025.9266338720965 1890.128501627355 1513.7511918462676 1854.4509815038969 0.9139316408807866 0.8822203912032226 0.928499643721879 0.9078099542632888 1.037996161072056 0.7832472859386893 0.964682297674004 1.092467071968189 1.0192388585512921 0.8162799701605845 1.0 10.856776418409787 -7.99930992165067 24.999820325159078 1.0162107182050495 0.911065457112935 0.09881805465946458 0.08510046630026065 17.009630177650443 616182.3646056607 0.008761294252190025 0.01204774606370565 1.001590227192557e-08 7.99930992165067 -0.10514526109211453 FTSQQGPIKPVSPNSS(ph)PFGTDYR ddPTM_A549_PD325901_60min_R1 1 FTSQQGPIKPVSPNSSPFGTDYR 23 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 FTSQQGPIKPVS(0.233)PNS(0.343)S(0.419)PFGT(0.005)DYR 99.537 2.0057e-08 8431500.0 2110.2 2373.0 1905.7 1750.7 3026.7 2648.8 2520.2 3061.3 2699.3 2300.1 2661.3 True False 2324.425950552865 2572.9810380442236 2035.032261905041 1858.8367628718213 2814.1150335481498 2627.22905100684 2616.107590106354 3000.239969956611 2585.8578080686043 2154.8712934624773 2333.976971370671 0.9959078341667625 1.102402067203428 0.8719161700682637 0.7964246372920232 1.2057167093193335 1.1256448042261322 1.120879778248196 1.285462541729649 1.1079191610661059 0.9232615916501479 1.0 11.18857461115155 -6.770488590383825 24.999980428550593 1.090146981940533 0.9481621563433481 0.3229183390678523 0.11477630612653149 207.07462860905167 572079.8484846022 0.01682784535538742 0.03213012401481547 1.696334167107952e-07 6.770488590383825 -0.14198482559718484 FTSQQGPIKPVSPNSSPFGT(ph)DYR ddPTM_A549_MK2206_60min_R1 1 FTSQQGPIKPVSPNSSPFGTDYR 23 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 FTSQQGPIKPVS(0.16)PNS(0.22)S(0.259)PFGT(0.361)DYR 72.95100000000001 6.0592e-05 4684700.0 1357.2 1267.9 1734.1 1609.5 1859.5 1545.0 1537.3 1446.6 1879.0 1979.6 1980.1 True False 1586.2621796457765 1332.4306943612391 1980.021455466277 2003.8275722532005 1585.9700132647556 1708.4908745120015 1816.6075108664866 1651.6599800266981 1453.4095001464232 1532.4069851080906 1488.386522020131 1.065759569962245 0.8952181940970422 1.3303140186857298 1.3463085983427752 1.0655632725779982 1.1478811781990146 1.2205213390409324 1.1096982911300233 0.9765000412485362 1.0295759619135842 1.0 10.539533516073698 -8.658467116460717 4.252974228756841 0.988876609679883 1.1544531925524395 0.23029881116080642 0.11960357995051853 0.21646153612799815 7.0914453011650025 0.020965376956617557 0.02367823987870115 2.195497179629997e-09 8.658467116460717 0.1655765828725565 FTSQQGPIKPVSPNSSPFGT(ph)DYR ddPTM_A549_PD325901_60min_R1 1 FTSQQGPIKPVSPNSSPFGTDYR 23 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 FTSQQGPIKPVS(0.149)PNS(0.214)S(0.258)PFGT(0.378)DYR 91.389 3.6146e-07 8914700.0 2000.9 2069.2 2376.1 1822.2 2304.7 2420.5 2483.7 1853.5 2071.5 2032.9 2426.1 True False 2204.0298950152737 2243.5787458580317 2537.3564346500348 1934.7531554835386 2142.8258227833685 2400.788250514218 2578.218562632789 1816.5304884573782 1984.4420588352973 1904.5423470631151 2127.7050803150278 1.0358718956900481 1.0544594580400437 1.192532018711143 0.9093145348870809 1.0071065969660147 1.1283463449543287 1.2117368081158402 0.8537510697621791 0.9326678199882293 0.8951157586093317 1.0 11.055082478427275 -8.271824039952627 24.99593203607852 0.9587318526633752 1.0734562306020579 0.3940757756902641 0.0888727894213207 709.5811378158616 1707962.0327714747 0.014547762191627074 0.017680199766795888 5.3478098896909795e-09 8.271824039952627 0.11472437793868262 FTSS(ph)PGLSTEGKR ddPTM_A549_PD325901_60min_R1 1 FTSSPGLSTEGKR 13 1 A0A2R8YEK3;A0A2R8Y6F8;A0A2R8YFN5 A0A2R8YEK3;A0A2R8Y6F8 1 FT(0.042)S(0.207)S(0.751)PGLSTEGKR 58.885 0.004403600000000001 5552400.0 1946.4 1912.3 2210.9 2019.2 2502.4 3228.0 1958.2 2753.8 2945.4 2774.6 2572.6 True False 2143.997095136053 2073.456232217434 2360.944969221734 2143.921398064076 2326.6400568113427 3201.7122382399907 2032.7203725681552 2698.8732986856926 2821.615080904409 2599.411282483802 2256.1865090550423 0.9502747607661312 0.9190092325682148 1.0464316490441952 0.9502412098732094 1.031226827867971 1.419081368224723 0.9009540498580141 1.1962101926653488 1.2506125134513746 1.1521260640692832 1.0 11.139670618607495 -7.0091892696477505 24.823061593722624 1.1321446868376999 0.9715486825913404 0.3140972943040443 0.12829536201526018 467.72921657501865 1263487.5677247255 0.020010282182311517 0.03640959050607246 9.790632074015135e-08 7.0091892696477505 -0.16059600424635945 FVADGIFK ddPTM_A549_MK2206_60min_R1 2 FVADGIFK 8 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;E9PQ96;E9PJH4;E9PK82;E9PQX2 P23396 RPS3 40S ribosomal protein S3 0 ; 98.29899999999999 0.006753699999999999 4015800.0 2701.3 2449.8 2467.7 2085.25 3479.7 2556.7 2277.1000000000004 2260.02 3338.4 3450.2 3526.2 False True 3157.213399555806 2574.4843560581758 2817.6569665268066 2596.136343610429 2967.840739530717 2827.248296999894 2690.8195947401773 2580.384756020974 2582.2577303293365 2670.7974237320336 2650.5472218309096 1.1911553107040698 0.9713029576887929 1.0630472618331483 0.9794718321664552 1.1197086832056633 1.0666658845817225 1.0151939843129634 0.9735290640241943 0.974235700862405 1.0076400079705563 1.0 11.372074528383282 -7.939893955654097 3.789786587861112 0.9865892855753831 1.0592324490217515 0.2796468766953879 0.05738100129037033 0.22035197196001916 6.499615820538964 0.00831515591938445 0.011558847659615581 1.1484340074352927e-08 7.939893955654097 0.07264316344636845 FVADGIFK ddPTM_A549_PD325901_60min_R1 2 FVADGIFK 8 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;E9PQ96;E9PJH4;E9PK82;E9PQX2 P23396 RPS3 40S ribosomal protein S3 0 ; 124.08 0.0031171 9023500.0 3208.1 3285.0 3317.0 3695.9 4174.1 2919.9 2902.8999999999996 3576.2 3411.2 4064.6 4080.1000000000004 False True 3533.7839503216023 3561.8384787085015 3542.1115667413656 3924.187349002093 3880.9256158632643 2896.12130248976 3013.3714480278327 3504.869885525371 3267.83912676754 3807.960462331025 3578.2735658848933 0.9875667372144341 0.9954069785683568 0.989894009365775 1.0966705805881156 1.0845804672017934 0.8093627413234294 0.8421299804344717 0.9794862860516452 0.9132446322503059 1.0641893058809022 1.0 11.805047973074375 -7.216561996890609 24.999974126783552 0.9406864832618789 1.0302404281696904 0.2937813299823583 0.07386530704708455 476.36339580527584 265369.2993783112 0.010619104277294952 0.018392768985271438 6.073485557759642e-08 7.216561996890609 0.08955394490781154 FVAFSGEGQS(ph)LR ddPTM_A549_MK2206_60min_R1 2 FVAFSGEGQSLR 12 0 Q92890;Q92890-1 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 FVAFS(0.004)GEGQS(0.996)LR;FVAFS(0.011)GEGQS(0.989)LR 81.904 0.00069484 22574000.0 1537.9099999999999 2374.3 1994.15 1747.65 2799.2 2379.1499999999996 2013.75 2274.0 3394.1 2996.8 2806.0 True False 1797.4716097104595 2495.1417285447515 2276.950455808822 2175.82432845499 2387.4413880778166 2630.9100738480433 2379.6223085977904 2596.3464638329287 2625.341769263959 2319.820798632008 2109.1927583397237 0.8522083164771345 1.1829842098020629 1.079536446731 1.0315910292465238 1.1319218590325142 1.2473540236877143 1.1282147158853981 1.2309668964901406 1.2447140067608276 1.0998619208507443 1.0 11.042475233180644 -5.2546724625399275 24.49694144166037 1.1305022604360242 0.8522081474387285 0.5128207912172441 0.07971769956848687 484.03189706306546 1752184.3332030687 0.013958168163616912 0.1865483729491238 5.5632366887688785e-06 5.2546724625399275 -0.2782941129972957 FVAFSGEGQS(ph)LR ddPTM_A549_PD325901_60min_R1 2 FVAFSGEGQSLR 12 0 Q92890;Q92890-1 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 FVAFS(0.059)GEGQS(0.941)LR;FVAFS(0.005)GEGQS(0.995)LR 73.46600000000001 0.0014079000000000001 44099000.0 2627.4 2656.7 2873.1000000000004 2611.4 2722.1000000000004 2482.7 2470.3 2662.4 3273.9 3009.1 3312.0 True False 2894.1317138103504 2880.589432689462 3068.0858433538206 2772.7002470802963 2530.909086735197 2462.481714336561 2564.3086183000273 2609.2963433876034 3136.309368293931 2819.1049124637807 2904.6449964978215 0.9963805274998676 0.9917182430770838 1.0562687857046429 0.954574569499332 0.8713316394212566 0.8477737270150452 0.8828303016003184 0.8983185024447653 1.079756518292401 0.970550589095336 1.0 11.504146133975599 -8.760173363470884 24.999947853747454 1.0376628013451785 0.9367362034535055 0.21475262025767627 0.06428275259940429 31.226907955174912 616637.0367263719 0.012231126820239371 0.013495569081047284 1.7371072646526891e-09 8.760173363470884 -0.10092659789167302 FVAFSGEGQS(ph)LRK ddPTM_A549_MK2206_60min_R1 1 FVAFSGEGQSLRK 13 1 Q92890;Q92890-1 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 FVAFS(0.002)GEGQS(0.998)LRK 54.812 0.0079824 6994500.0 914.12 1627.1 1410.2 1134.3 1433.2 1123.3 1136.3 1029.6 1587.6 1499.6 1916.2 True False 1068.4011079117286 1709.9124400939902 1610.1875650184793 1412.2035509206612 1222.3781785485598 1242.1668604138072 1342.7510014945606 1175.5489530177583 1228.0111348762437 1160.8393184825677 1440.3546555704131 0.7417625261804826 1.1871468137941528 1.1179104804440045 0.9804554353742805 0.8486647186657444 0.862403475150973 0.9322363740774668 0.816152430563856 0.8525755307049175 0.805939921805473 1.0 10.492208371909545 -6.5296241731729845 15.488079081916268 0.910455024591287 1.0354981648109771 0.18679699348124423 0.1182662150116532 2.018282823005831 4632.846216209754 0.016297544847377936 0.03421672308249302 2.9537642295407455e-07 6.5296241731729845 0.1250431402196901 FVAFSGEGQS(ph)LRK ddPTM_A549_PD325901_60min_R1 2 FVAFSGEGQSLRK 13 1 Q92890;Q92890-1 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 FVAFSGEGQS(1)LRK;FVAFSGEGQS(1)LRK 121.79 3.5264999999999996e-06 29658000.0 5283.8 5297.7 5838.5 5490.9 7005.700000000001 6633.1 6361.0 6169.3 6077.5 5522.4 6437.9 True False 5820.207486272026 5744.1557712797685 6234.735719752633 5830.060422261312 6513.643800352949 6579.082232797299 6603.071335872764 6046.24847177778 5822.083810075556 5173.714721541321 5646.07911321055 1.0308405832738077 1.0173707551918183 1.1042593620703542 1.0325856767788264 1.153657904848073 1.165247971358342 1.1694967788217967 1.0708756201504375 1.0311729066022464 0.9163376243588222 1.0 12.463033628723672 -8.768060887186023 2.8035625951957774 1.0132066472531962 1.097017959589151 0.3927654323797811 0.05865015630604544 0.23454472506170407 3.647229979293251 0.00998029249874032 0.010815172547176084 1.7058432165552142e-09 8.768060887186023 0.08381131233595474 FVDGLMIHSGDPVNYYVDTAVR ddPTM_A549_MK2206_60min_R1 2 FVDGLMIHSGDPVNYYVDTAVR 22 0 P23396;P23396-2;E9PL09;H0YEU2;E9PSF4 P23396 RPS3 40S ribosomal protein S3 0 ; 89.47 2.2463e-06 6156100.0 2982.8 2994.8 3256.8 3109.9 4258.0 2955.3999999999996 3402.5 3168.6 4735.8 3759.1 4708.4 False True 3486.223717541573 3147.222528174963 3718.6632121345765 3871.8256396087168 3631.6538405384945 3268.138466364255 4020.6902073266247 3617.7587534305253 3663.1488615185904 2909.916699191667 3539.174334770763 0.9850387089697802 0.8892533202603067 1.050714901382624 1.0939912175474962 1.0261302487586337 0.9234183335520646 1.1360531657977935 1.0222041671945081 1.0350292229263292 0.8222021364144375 1.0 11.789197113312648 -5.7708704523626055 24.999577094198226 1.0264976563631125 0.9371460074194282 0.08965034330338639 0.08251015803470377 155.97217771561176 413450.3750346663 0.007190784203023922 0.022787300604361058 1.6948432874125951e-06 5.7708704523626055 -0.0893516489436843 FVDGLMIHSGDPVNYYVDTAVR ddPTM_A549_PD325901_60min_R1 2 FVDGLMIHSGDPVNYYVDTAVR 22 0 P23396;P23396-2;E9PL09;H0YEU2;E9PSF4 P23396 RPS3 40S ribosomal protein S3 0 ; 109.05 8.9609e-21 2578600.0 1995.5 2210.4 2193.5 2272.7 2145.4 2601.9 2262.1 2631.5 2601.4 2572.1 2387.4 False True 2198.081690990542 2396.678165399474 2342.3641005870327 2413.0795173238052 1994.7145052282042 2580.710989057197 2348.185453368617 2579.0126681281863 2492.0722046121837 2409.697167042669 2093.764934975515 1.0498225728554609 1.1446739437478932 1.1187330829066657 1.1525073693872059 0.9526926695099757 1.2325695907632421 1.1215134106714213 1.2317584581949959 1.1902349509169359 1.1508919300297904 1.0 11.031883766003807 -10.91582047490507 1.2111891436109907 1.0011446280264444 1.13812205562497 0.0 0.0874930817287222 0.4506420251176462 1.1900492467628516 0.050173166187340475 0.012310983352274697 1.2138905348911331e-11 10.91582047490507 0.1369774275985256 FVDKYSIS(ph)LSPPEQQKK ddPTM_A549_MK2206_60min_R1 1 FVDKYSISLSPPEQQKK 17 2 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 FVDKY(0.048)S(0.158)IS(0.636)LS(0.158)PPEQQKK 43.598 0.012737 5475600.0 1262.7 1521.6 1257.6 1486.0 2079.8 1327.6 1348.4 1492.7 2318.7 2022.2 2696.8 True False 1475.8128899489557 1599.0429407209235 1435.9465903894766 1850.070066709074 1773.8641750943996 1468.0857508104423 1593.3868260276913 1704.2947962020282 1793.5181522030402 1565.3836155211054 2027.110132106404 0.728037843911033 0.7888288432850618 0.7083712757615989 0.912663815057071 0.8750704497989695 0.7242259448848641 0.7860386077652212 0.8407509632597352 0.8847660143355731 0.7722242569497144 1.0 10.985208756657594 -9.70812879562138 0.3049967435232161 1.0463341816342817 0.761950092125951 0.0 0.09027661120388189 0.9572385948704135 0.19716315478684004 0.09994172757166757 0.03896950559005488 1.9582638390236148e-10 9.70812879562138 -0.2843840895083307 FVDKYSISLS(ph)PPEQQK ddPTM_A549_MK2206_60min_R1 2 FVDKYSISLSPPEQQK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 FVDKYS(0.002)IS(0.108)LS(0.89)PPEQQK;FVDKYS(0.033)IS(0.127)LS(0.84)PPEQQK 138.3 2.8671000000000002e-11 10165200.0 3732.2 4360.1 4753.8 4134.6 5842.299999999999 5133.5 4575.5 4857.5 6616.200000000001 5478.5 6325.4 True False 4362.104116470653 4582.010466507166 5427.960322354874 5147.577185609245 4982.905409248014 5676.723562658489 5406.809123768686 5546.065500469852 5117.6412639003565 4240.903045016506 4754.6286078410885 0.9174437114345578 0.9636947161237263 1.1416160482867919 1.0826454829973735 1.0480114894842603 1.19393627365484 1.1371674992347571 1.1664560910863924 1.076349318947984 0.8919525361082099 1.0 12.215116938775962 -5.603767958598816 6.123532791425243 1.0717304294734462 0.928465324258846 0.3137314982727669 0.08058821514760812 0.15622063780774614 9.028180258620566 0.00999563458713756 0.04014801279205912 2.490187457792627e-06 5.603767958598816 -0.14326510521460023 FVDKYSISLS(ph)PPEQQK ddPTM_A549_PD325901_60min_R1 2 FVDKYSISLSPPEQQK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 FVDKYSIS(0.04)LS(0.96)PPEQQK;FVDKYSIS(0.018)LS(0.981)PPEQQK 180.05 1.2979e-29 20056500.0 8716.7 8179.1 10071.400000000001 10093.7 11589.9 10401.0 10878.9 10974.099999999999 11667.3 10734.5 11438.4 True False 9601.61296710462 8868.381461553949 10754.905768248113 10717.164924544059 10775.865406984412 10316.297704440558 11292.902492662506 10755.212966485089 11176.96395512867 10056.721838038766 10031.549313991758 0.9571415806841049 0.8840490321055939 1.0721081491617088 1.0683459343210346 1.0741975212098593 1.0283852854166444 1.1257386211431413 1.072138772371281 1.1141812301654457 1.0025093356229529 1.0 13.29225681850034 -5.768104915371466 24.99992748875848 1.0624468589124814 0.9205952952658142 0.6403268274431184 0.04086120994020252 70.54459076352023 264590.7139707261 0.00642902178387236 0.020668000692661948 1.7056702892496578e-06 5.768104915371466 -0.14185156364666718 FVDKYSISLS(ph)PPEQQKK ddPTM_A549_MK2206_60min_R1 1 FVDKYSISLSPPEQQKK 17 2 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 FVDKY(0.005)S(0.013)IS(0.108)LS(0.873)PPEQQKK 47.047 0.0050838 7322200.0 1274.0 1387.1 1574.7 1464.3 2090.3 1049.7 1822.0 1578.4 2133.4 1848.2 1932.3 True False 1489.02005369048 1457.6974652168728 1798.0161385864405 1823.053565734925 1782.8196390036667 1160.778557265534 2153.0338156499956 1802.1430336472713 1650.1883063397458 1430.6903363693527 1452.4565812330186 1.025173539044053 1.0036082896050533 1.2379138638761027 1.2551518505202404 1.2274512450418287 0.7991829650977424 1.4823395366643204 1.2407551846523337 1.1361360660701258 0.9850141855220291 1.0 10.504279321974469 -10.183712769954736 0.984933611010929 1.012575305345597 1.1583322891905319 0.12163164933422266 0.16656683183647325 0.8340242705112703 1.6067294683163504 0.06734834185487111 0.03066630745804894 6.550692750591109e-11 10.183712769954736 0.14575698384493485 FVDKYSISLS(ph)PPEQQKK ddPTM_A549_PD325901_60min_R1 1 FVDKYSISLSPPEQQKK 17 2 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 FVDKY(0.001)S(0.004)IS(0.146)LS(0.85)PPEQQKK 58.997 0.0010759 8074700.0 1992.5 2505.0 2080.2 1903.0 2499.4 2538.8 1998.3 2435.3 2935.6 2426.8 2364.9 True False 2194.7771331990252 2716.105141298266 2221.3748812587864 2020.5439879734245 2323.8507664619065 2518.124854536456 2074.346400011717 2386.7260310441093 2812.2269408239913 2273.571433839721 2074.032292336264 1.058217435335469 1.309577074250251 1.0710416079185296 0.9742104765868479 1.1204506193316006 1.2141203701799408 1.0001514478229743 1.150766089738948 1.3559224469240054 1.0962083098902422 1.0 11.018222641508839 -8.511945503138502 24.73427418499988 1.1725623623678998 1.1101294563638346 0.021481691156373994 0.11859804879143011 1490.0728677184704 3370997.9348937687 0.025189116306774492 0.029521550344370023 3.076482838849656e-09 8.511945503138502 -0.06243290600406515 FVEDEKDEEDNET(ph)RTLLR ddPTM_A549_MK2206_60min_R1 1 FVEDEKDEEDNETRTLLR 18 2 Q9BTT6 Q9BTT6 LRRC1 Leucine-rich repeat-containing protein 1 1 FVEDEKDEEDNET(0.5)RT(0.5)LLR 70.453 0.00040969999999999993 1830200.0 354.94 521.55 387.5 326.81 641.97 663.03 520.05 452.59 646.89 762.59 529.74 True False 414.84519455015646 548.094667279836 442.4533267938312 406.8784646710581 547.537063412517 733.191394516306 614.5363533637651 516.7460184987443 500.37044787105924 590.3203893582433 398.1909379197738 1.041824800728484 1.3764619309097998 1.111158704678948 1.0218174898621994 1.3750615879732375 1.8413060788039004 1.5433207912119284 1.297734250805217 1.2566093304008648 1.482505836125229 1.0 8.637316578168727 -9.984337182578821 0.8872152205432262 1.0272536414380373 1.3289596682256275 0.0 0.26054126947012535 0.6322132634493876 1.0098192876095529 0.0963226494616094 0.047786243696455066 1.0367232001141576e-10 9.984337182578821 0.3017060267875902 FVFDRPLPVSR ddPTM_A549_MK2206_60min_R1 2 FVFDRPLPVSR 11 1 P25786;P25786-2;B4DEV8;F5GX11 P25786 PSMA1 Proteasome subunit alpha type-1;Proteasome subunit alpha type 0 ; 80.979 0.00083518 2632300.0 1005.05 1013.77 880.36 1113.07 1405.3400000000001 1482.78 813.72 1002.79 1480.35 1676.7200000000003 1400.82 False True 1174.6778688866702 1065.366562838231 1005.2082858741089 1385.7721999676116 1198.6163476426404 1639.6867954102954 961.5623910377132 1144.938553415577 1145.0530886331865 1297.9477874673855 1052.9577333348009 1.115598311022772 1.0117847365668993 0.9546520758155547 1.3160758082651247 1.1383328216285826 1.5572199562249065 0.9132013190998357 1.0873547125101266 1.0874634872633608 1.232668459878899 1.0 10.040231811118675 -9.06902673475314 0.8168366603671035 1.0219880706534865 1.1475331992744753 0.0 0.1789014527245363 1.0310819326865073 1.457217129718347 0.04604961017980326 0.039899518759355525 8.530475996064823e-10 9.06902673475314 0.12554512862098877 FVFDRPLPVSR ddPTM_A549_PD325901_60min_R1 2 FVFDRPLPVSR 11 1 P25786;P25786-2;B4DEV8;F5GX11 P25786 PSMA1 Proteasome subunit alpha type-1;Proteasome subunit alpha type 0 ; 115.33 2.1423e-05 2530000.0 1070.0 873.47 754.29 967.36 1440.7 1392.7 1159.7 973.7 1134.6 1416.8 1361.8 False True 1178.625612307633 947.0803823432316 805.4806553142431 1027.1116301660386 1339.5102021451823 1381.3583129482129 1203.8330181121905 954.2787896471272 1086.9167076777833 1327.3430062073999 1194.3072331614546 0.9868696928073434 0.7929956011705731 0.6744333727110172 0.8600062041382501 1.1215792427207867 1.1566188955346228 1.007975992011302 0.7990228671068604 0.9100813237148389 1.1113915827954803 1.0 10.221958299440475 -6.536571428066189 24.5331157856928 0.973745532851715 0.8075275790457204 0.3255969305363826 0.12089624039454706 178.61347960903953 320020.19096738205 0.017134463249397887 0.03568337095034258 2.9068898262807554e-07 6.536571428066189 -0.16621795380599458 FVGHTK ddPTM_A549_MK2206_60min_R1 1 FVGHTK 6 0 H0YAF8;H0YAM7;J3KPE3;H0Y8W2;P63244;D6RAU2;E9PD14;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6R9L0 H0YAF8 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 76.592 0.048494 2834600.0 771.63 811.01 1135.1 846.27 1107.3 1019.2 887.4 933.0 1381.3 1304.7 1064.9 False True 901.862279457759 852.2869448962126 1296.0742483707807 1053.6061879905042 944.41763683144 1127.0510675097948 1048.629093308346 1065.255607192666 1068.4377554828395 1009.9673638464965 800.4559402551573 1.1266857226023919 1.0647518520813692 1.6191700044822424 1.3162575664747411 1.1798496198683874 1.408011373056374 1.3100397418177443 1.3308110460809373 1.3347864657513304 1.261740107175111 1.0 9.644678183990631 -10.690045008119938 0.8511254580850707 0.9911618782208369 1.3041123052835915 0.05819954028148955 0.15928543549000435 0.5410025824226528 0.6661650421473544 0.10959028918961328 0.025811859933976417 2.041526360068458e-11 10.690045008119938 0.31295042706275455 FVGHTK ddPTM_A549_PD325901_60min_R1 2 FVGHTK 6 0 H0YAF8;H0YAM7;J3KPE3;H0Y8W2;P63244;D6RAU2;E9PD14;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6R9L0 H0YAF8 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 84.609 0.043431 13637500.0 2466.3 2378.3 2577.8 2529.7 2790.3 2520.8999999999996 2320.3999999999996 2138.2 2362.7 2643.9 2429.0 False True 2716.676960405901 2578.7276876445776 2752.7450095706654 2685.953823634458 2594.318954012424 2500.3706262017304 2408.7040917715995 2095.5519236145483 2263.4039355105742 2476.9637027892036 2130.2483986996403 1.2752864699085007 1.2105291050652593 1.2922178518012328 1.2608641439533694 1.2178480948963812 1.1737460418832013 1.1307151284525954 0.9837124745141123 1.0625070470149 1.162758157359117 1.0 11.056805951112139 -7.743660966325456 1.2494259240193502 1.0254101713792756 1.2570822023828074 0.7402307176447557 0.05190249400804071 0.08863412032765723 0.28037531888649964 0.005820406389106169 0.009548987009828406 1.8044258232047113e-08 7.743660966325456 0.23167203100353184 FVIGGPQGDAGLTGR ddPTM_A549_MK2206_60min_R1 1 FVIGGPQGDAGLTGR 15 0 P31153-2;P31153 P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2 0 88.441 8.4932e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FVIGGPQGDAGLTGR ddPTM_A549_PD325901_60min_R1 1 FVIGGPQGDAGLTGR 15 0 P31153-2;P31153 P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2 0 95.40100000000001 3.4681999999999997e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FVIKPIDK ddPTM_A549_PD325901_60min_R1 1 FVIKPIDK 8 1 E7EQR4;P15311;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 E7EQR4;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 80.23899999999999 0.030036 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 FVIKPIDKK ddPTM_A549_MK2206_60min_R1 1 FVIKPIDKK 9 2 E7EQR4;P15311;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 E7EQR4;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 47.261 0.011590000000000001 3164400.0 1464.3 1932.6 1858.2 2089.3 2433.5 1976.1 1811.5 1703.0 2540.8 2546.4 2203.0 False True 1711.4380413021745 2030.9610851979883 2121.720701543992 2601.178593792242 2075.535373637958 2185.209590370982 2140.626101564197 1944.4054652187674 1965.3128568238606 1971.1664714483932 1655.9343002930905 1.0335180816046023 1.2264744349087522 1.2812831409847965 1.5708223407968835 1.2533923436881527 1.3196233630671295 1.2926998982902396 1.1742044747032652 1.1868302120899434 1.1903651437738252 1.0 10.693429719261628 -9.628316472142382 0.5718795836429799 1.0090094659633448 1.2907674851865811 0.17901336395142076 0.1308386620132336 0.5500265668098911 0.3913143154641313 0.06562400730702113 0.032562829422525266 2.3533337750995724e-10 9.628316472142382 0.2817580192232363 FVIKPIDKK ddPTM_A549_PD325901_60min_R1 2 FVIKPIDKK 9 2 E7EQR4;P15311;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 E7EQR4;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ; 84.213 0.00045686 11904800.0 5187.7 4810.9 5655.9 4933.2 6454.2 6946.5 6600.4 7079.3 6548.700000000001 6736.2 7082.6 False True 5714.351485017103 5216.331426855017 6039.743385689628 5237.912559889907 6000.879257781238 6889.930007104735 6851.581833877463 6938.097807896586 6273.480912717698 6310.875182392913 6211.485100300566 0.919965417729263 0.8397881251623069 0.9723509415481608 0.8432625169842959 0.9660941241718286 1.1092242669585313 1.1030505142072906 1.1169789021245273 1.009980835728662 1.0160010175485308 1.0 12.600722527453787 -6.99432522620486 8.469486483775185 1.029274913345971 0.8965185707322147 0.6465077752193403 0.05501192316038595 0.07820904470291765 52.69784710223154 0.00878367865440086 0.016278526424235037 1.0131523912572847e-07 6.99432522620486 -0.13275634261375635 FVKDFQDYMEPEEGCQGS(ph)PQR ddPTM_A549_MK2206_60min_R1 1 FVKDFQDYMEPEEGCQGSPQR 21 1 O43237;H3BUM4;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 FVKDFQDY(0.003)MEPEEGCQGS(0.997)PQR 53.705 0.0024370999999999998 2788300.0 852.49 1248.4 1649.2 1299.0 1516.4 953.56 1320.6 1190.1 1714.6 1628.1 1946.0 True False 996.369470620563 1311.9382276524723 1883.0813588345447 1617.2550583143254 1293.3395687629336 1054.4650862780998 1560.535925876719 1358.800319528393 1326.2458376535706 1260.3110792354419 1462.7544931322543 0.6811597402698777 0.8968957086183115 1.287352982114058 1.1056230323731449 0.8841808894351466 0.7208763269768749 1.066847467024409 0.9289325897873264 0.9066769877518049 0.8616012359918906 1.0 10.514471934341858 -6.788030923947969 24.99326523460103 0.9392183570420725 1.0069532466709548 0.03609412706980153 0.16081863512208983 676.7309552793039 636054.4046395959 0.023379564594419568 0.04419288224011488 1.6291800227108039e-07 6.788030923947969 0.0677348896288823 FVKDFQDYMEPEEGCQGS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 FVKDFQDYMEPEEGCQGSPQR 21 1 O43237;H3BUM4;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 FVKDFQDYMEPEEGCQGS(1)PQR 81.839 3.3597e-05 3780300.0 2224.2 2342.9 2779.2 2568.6 2409.5 2766.9 2460.4 3425.6 2326.5 2925.2 2797.5 True False 2449.9991466305005 2540.344405408264 2967.813224687249 2727.256588286147 2240.2650323237413 2744.3672837627696 2554.0318683825412 3357.2737206687852 2228.7252956216817 2740.502372782245 2453.425234813606 0.9986035489753304 1.0354276826378455 1.2096611637373669 1.11161185985492 0.9131173025103171 1.1185860668671517 1.0410066025821156 1.3684027020794245 0.9084137816781707 1.1170107545545194 1.0 11.260581592340031 FVKDFQDYMEPEEGCQGS(ph)PQRR ddPTM_A549_PD325901_60min_R1 2 FVKDFQDYMEPEEGCQGSPQRR 22 2 O43237;H3BUM4;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 FVKDFQDYMEPEEGCQGS(1)PQRR;FVKDFQDYMEPEEGCQGS(1)PQRR 81.297 1.8917000000000002e-05 11685700.0 4479.4 4948.1 5420.0 4818.799999999999 5192.6 6342.2 5932.4 6159.4 5729.1 5790.6 5605.0 True False 4934.145390440006 5365.093752358458 5787.833793107692 5116.446331711158 4827.889689497518 6290.551225949709 6158.160728333838 6036.545935044178 5488.325850481918 5424.980527770019 4915.620533022434 1.0037685694599745 1.0914377373754804 1.1774370609419207 1.0408546179143823 0.9821526411700104 1.2797064345570794 1.2527738231550214 1.2280333468565217 1.1165072270351488 1.103620690678985 1.0 12.263157834169064 -10.221080965389719 1.0181443423195262 1.0108253480374911 1.1320203205502826 0.05808234971356829 0.09801968973629419 0.5985988231640744 1.2295075006604432 0.0410453966295099 0.01854687376723008 6.010616712906604e-11 10.221080965389719 0.12119497251279143 FVKGS(ph)TEK ddPTM_A549_MK2206_60min_R1 1 FVKGSTEK 8 1 Q13111;Q13111-3;Q13111-2;K7ENC7 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 FVKGS(0.892)T(0.108)EK 58.676 0.0039347 4538100.0 4458.5 5467.4 4277.1 5057.7 6468.7 5217.9 4903.4 4931.7 6998.5 7010.6 6432.9 True False 5210.98580014051 5745.667306846465 4883.657094270695 6296.836727048784 5517.162799035077 5770.054714638299 5794.2843093623405 5630.783577697825 5413.350924308008 5426.900590926844 4835.43339099202 1.077666752653053 1.1882424681001975 1.0099729847108454 1.3022279944501414 1.140986205975468 1.1932859473128914 1.1982967897265577 1.164483743729667 1.1195172152288555 1.1223193770048978 1.0 12.239429486259564 -9.961731429592481 0.7247229440382936 1.0069446628268128 1.1612976189101383 0.1277528319372936 0.07791565131988391 0.43601413215181023 0.4645280131759488 0.032640605046164 0.014251313608789408 1.0921154986787963e-10 9.961731429592481 0.15435295608332544 FVLMAT(ph)PNLSR ddPTM_A549_MK2206_60min_R1 4 FVLMATPNLSR 11 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 FVLMAT(1)PNLSR;FVLMAT(0.995)PNLS(0.005)R;FVLMAT(1)PNLSR;FVLMAT(1)PNLSR 176.78 1.9083e-15 53704100.0 12256.7 14736.599999999999 13011.4 12844.2 19689.7 14928.2 13396.3 13508.3 20991.0 18464.1 18832.3 True False 14325.331312455352 15486.629994892195 14856.61217095549 15991.029576598048 16793.371212787868 16507.89221546283 15830.2343054841 15423.14289243375 16236.572015739011 14293.046986125619 14155.720164961216 1.0119818098632638 1.0940192243433364 1.0495129882356073 1.1296514335017487 1.1863311097626432 1.166164068171099 1.1182924020119942 1.0895343163542968 1.1469972439783318 1.0097011539903367 1.0 13.78909752702617 -4.08101974761991 12.59332322556684 1.0884693822139377 1.1036832825294036 0.0 0.06256299803960841 0.0 0.0 0.009381174679626724 0.0 8.298130345805461e-05 4.08101974761991 0.015213900315465878 FVLMAT(ph)PNLSR ddPTM_A549_PD325901_60min_R1 4 FVLMATPNLSR 11 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 FVLMAT(0.983)PNLS(0.017)R;FVLMAT(0.989)PNLS(0.011)R;FVLMAT(1)PNLSR;FVLMAT(0.998)PNLS(0.002)R 165.09 8.2547e-14 102008100.0 14934.3 13940.2 15190.6 16767.9 17726.4 17236.9 16178.5 17635.1 17939.7 17447.9 17367.300000000003 True False 16450.419141949405 15114.989577136164 16221.525464498463 17803.6151003361 16481.358816760156 17096.528401275977 16794.181670714897 17283.35409603168 17185.756795987236 16346.236616322756 15231.232200385464 1.0800451943430478 0.9923681405601342 1.0650172783846035 1.1688886930556766 1.082076525387293 1.1224652199080325 1.1026147753357656 1.1347311805537492 1.128323471790569 1.0732051354262115 1.0 13.894745039528061 -4.832876926870295 19.487769959153677 1.0767047845101756 7.148609823274345 0.0 0.05262972229313807 25984.887057061907 2762728.113016761 0.008621667682512598 624245.3018430156 1.4693426102944093e-05 4.832876926870295 6.07190503876417 FVLSSGK ddPTM_A549_MK2206_60min_R1 1 FVLSSGK 7 0 P27797;K7EJB9 P27797 CALR Calreticulin 0 79.597 0.045008 1838800.0 1725.6 2549.1 2371.3 2129.7 3327.9 2530.2 2506.5 2193.2 3590.7 3019.9 3550.0 False True 2016.8390931305278 2678.8383019135836 2707.5859969708704 2651.476595605866 2838.3703184424717 2797.9440845891695 2961.89860533848 2504.092816393306 2777.4121831696443 2337.7024925883607 2668.437024984327 0.7558128875619141 1.0038978910994978 1.0146711245646778 0.9936440585932281 1.063682707092982 1.0485329271001265 1.1099750818949445 0.9384118092155515 1.0408385722297335 0.8760568342818925 1.0 11.381779248840152 -5.256993227590051 4.0705603066347535 1.022998925821346 0.731651616551518 0.5837231286620184 0.0606049938038778 0.07851494035909866 2.7512398257212753 0.005448690309780207 0.06725265475522811 5.53358738252394e-06 5.256993227590051 -0.2913473092698281 FVLSSGK ddPTM_A549_PD325901_60min_R1 2 FVLSSGK 7 0 P27797;K7EJB9 P27797 CALR Calreticulin 0 ; 105.12 0.027427999999999998 10356900.0 6494.2 7041.6 7267.4 6861.6 8939.8 8684.1 8766.3 8423.0 8710.6 7614.4 8504.1 False True 7153.486403222638 7635.020344497349 7760.609466426348 7285.425448175747 8311.899288635726 8613.37956880418 9099.906343603427 8254.996657284328 8344.523773927463 7133.625484518368 7458.149611931506 0.9591502953733363 1.0237150958037748 1.040554275555289 0.976840882424853 1.1144720501903578 1.1548949829357864 1.220129230049964 1.1068424591641377 1.1188463906084616 0.9564873133016846 1.0 12.864602022806986 -6.760634613110241 24.999736587503282 1.0848099598384306 1.0046464977508562 0.2940410660617526 0.07000158577751048 27.395135926187237 850968.3101673631 0.01088696186806222 0.021661314128926162 1.7352633205130426e-07 6.760634613110241 -0.08016346208757441 FVNVVPTFGK ddPTM_A549_MK2206_60min_R1 1 FVNVVPTFGK 10 0 P62861;E9PR30 P62861 FAU 40S ribosomal protein S30 0 103.7 0.0010115 2558600.0 1847.9 1728.6 1752.0 1381.1 2329.0 1517.5 1652.6 2088.3 2700.1 2539.5 2539.8 False True 2159.780343182604 1816.5783565524387 2000.4599446265606 1719.4695619999352 1986.4071852076445 1678.0808427650254 1952.8560283991121 2384.3229201505305 2088.5316611736885 1965.825186240652 1909.097565085971 1.1313095688147004 0.9515377263972541 1.047856317671473 0.9006713923091215 1.040495374115776 0.8789916625814028 1.022921019917162 1.2489266990622132 1.093988960736869 1.0297143646255327 1.0 10.89867511871296 -8.002700283473587 24.97884501293804 1.0645340255216216 0.9872941520267925 0.19512203148757212 0.08944035107563167 169.48372340766082 1567818.4933006442 0.014270382137531573 0.01952590387388617 9.938016570046465e-09 8.002700283473587 -0.07723987349482908 FVNVVPTFGK ddPTM_A549_PD325901_60min_R1 2 FVNVVPTFGK 10 0 P62861;E9PR30 P62861 FAU 40S ribosomal protein S30 0 ; 120.12 0.00014834 7409500.0 5490.1 5685.9 6162.9 6506.700000000001 7691.700000000001 7202.9 6847.200000000001 6292.799999999999 7725.3 6458.3 7186.0 False True 6047.4509104019935 6165.0707476677835 6581.151454528301 6908.604081212134 7151.461526924478 7144.241970513884 7107.773942931612 6167.285167393898 7400.632506454407 6050.52183581963 6302.167555807176 0.9595826922801391 0.9782460864574978 1.0442679278598446 1.0962266585321352 1.1347622010358507 1.1336166338406495 1.1278300489459543 0.9785974607595145 1.1742995470875799 0.9600699731070043 1.0 12.62163239647844 -5.861473603035594 2.4637280922385525 1.0878288387893413 0.9622017771972065 0.25794721013198363 0.06709661557582225 0.2757276015489241 3.2743439301066832 0.009883758122126487 0.043543216375885 1.3757084250211595e-06 5.861473603035594 -0.12562706159213488 FVPDKEFS(ph)GSDRR ddPTM_A549_PD325901_60min_R1 1 FVPDKEFSGSDRR 13 2 G3V4X8;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 1 FVPDKEFS(0.5)GS(0.5)DRR 86.49700000000001 4.486e-05 3573600.0 1121.7 1177.0 1351.9 922.28 1345.2 1304.2 1225.8 1180.4 1170.0 1469.1 1288.0 True False 1235.5741582481037 1276.1899206818596 1443.6480636351082 979.2471409501467 1250.7177926880668 1293.5790276061316 1272.4484897834973 1156.855995994114 1120.8289687845986 1376.3407752818262 1129.5841653047096 1.093830983293576 1.129787367670476 1.2780349689530914 0.866909408814164 1.1072373631854877 1.1451816228825975 1.1264751479941733 1.0241432480438921 0.9922491862146906 1.2184490696278067 1.0 10.141576054590892 -8.395875492293783 4.057157701124178 0.9967689287059102 1.1063449622777424 0.0 0.11229952411792989 0.25182462825060165 7.113058468230986 0.01450472802081281 0.017586266805069473 4.019060166044406e-09 8.395875492293783 0.10957603357183221 FVPDKEFSGS(ph)DRR ddPTM_A549_PD325901_60min_R1 1 FVPDKEFSGSDRR 13 2 G3V4X8;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 1 FVPDKEFS(0.133)GS(0.867)DRR 113.59 4.5278e-06 4113200.0 1256.5 1031.9 1395.2 1533.3 1672.7 1305.6 1469.0 1431.9 1362.7 1424.9 1392.6 True False 1384.0589550135885 1118.8618344533647 1489.88666201916 1628.0084586230428 1555.2153225017314 1294.9676264703005 1524.9035988676449 1403.3396311961806 1305.430457916899 1334.9315708250444 1221.3190284187406 1.133249317179271 0.9161093935480326 1.2198996554963513 1.3329919707636495 1.2733899057605704 1.0603025060101732 1.248571064058471 1.149036081926198 1.068869335154025 1.0930244594267884 1.0 10.254224389654551 -8.974512199942767 1.5475022519215067 1.0230073971152407 1.1697670995095197 0.16702717100922204 0.10886271795642669 0.3725089579004907 1.7959989385277548 0.023032150185925516 0.0227997413030628 1.060444148586426e-09 8.974512199942767 0.14675970239427905 FVQDHFDHNIS(ph)PTIGASFMTK ddPTM_A549_PD325901_60min_R1 2 FVQDHFDHNISPTIGASFMTK 21 0 J3QR51;Q13636 J3QR51 RAB31 Ras-related protein Rab-31 1 FVQDHFDHNIS(0.871)PT(0.119)IGAS(0.01)FMTK;FVQDHFDHNIS(0.966)PT(0.034)IGASFMTK 74.074 0.00036551 4492400.0 2569.3 2315.3999999999996 2559.2 2392.2 2519.3999999999996 2871.0 2434.65 2348.4 3062.5 2972.9 3215.2 True False 2830.133444581309 2510.5268838970055 2732.8827017197805 2539.960760919614 2342.44603545816 2847.6195278770156 2527.3019380416013 2301.55931971584 2933.7937751306254 2785.190586641713 2819.7507828320668 1.0036821203534925 0.8903364436255297 0.9691929933520441 0.9007749111673478 0.8307280379954298 1.0098834071488256 0.8962855701393797 0.8162279211796967 1.0404443516756532 0.9877435281157568 1.0 11.461351943647658 -8.794689672619146 24.99950670521778 1.0190987456068341 0.9149511229746046 0.32760933140148674 0.06001980020040096 132.38730026594362 99535.89311153836 0.009882790000594945 0.010521343479804093 1.6043914074199473e-09 8.794689672619146 -0.10414762263222954 FVQRPLLFAS(ph)R ddPTM_A549_MK2206_60min_R1 2 FVQRPLLFASR 11 1 O43194 O43194 GPR39 G-protein coupled receptor 39 1 FVQRPLLFAS(1)R;FVQRPLLFAS(1)R 107.65 3.7603e-05 33143000.0 3798.4 6369.4 6418.200000000001 3973.3 8074.0 6506.5 4613.700000000001 5723.1 8142.6 7317.700000000001 7472.0 True False 4439.477058036044 6693.575254092968 7328.397269750109 4946.758678368215 6886.325295563124 7195.013511334848 5451.949569299879 6534.366951258674 6298.314101060284 5664.626487636626 5616.496183290953 0.7904353378256473 1.1917706405652548 1.3047987625366957 0.880755281751067 1.2260891970424384 1.2810501915304378 0.9707029776890796 1.1634240882595774 1.1213955988784852 1.008569453761735 1.0 12.455454679270407 -10.658114970785785 0.8519109754511069 0.9975378128803095 1.1122311935381548 0.0541564533536143 0.15520369182907287 1.4963111738340307 1.8707169726941495 0.10988861358848934 0.026996134517176706 2.197278110310678e-11 10.658114970785785 0.11469338065784529 FVQRPLLFAS(ph)R ddPTM_A549_PD325901_60min_R1 2 FVQRPLLFASR 11 1 O43194 O43194 GPR39 G-protein coupled receptor 39 1 FVQRPLLFAS(1)R;FVQRPLLFAS(1)R 132.97 1.9588e-08 90545000.0 10159.9 10877.5 13489.8 12661.099999999999 15580.8 14507.1 13034.4 14609.2 16428.3 12866.2 14478.1 True False 11191.32556867693 11794.185099589575 14405.298948757212 13443.147391555609 14486.458358841974 14388.958987413684 13530.431224697353 14317.808045304315 15737.875681952148 12053.825936240572 12697.385484237662 0.8813881867703921 0.9288672155563595 1.134509066188447 1.0587335013372416 1.1409008867869088 1.1332221901332298 1.065607659269211 1.1276186001502608 1.239457973571717 0.9493155855749993 1.0 13.632243842118656 -5.700266317366975 4.770762170488945 1.1137363851932995 0.8945175298192012 0.4676212205209964 0.07595985287715185 0.1264084401132494 5.628873841191524 0.011614687026793387 0.04730579027300319 1.994039158475467e-06 5.700266317366975 -0.21921885537409835 FVQSTQNNGT(ph)LK ddPTM_A549_MK2206_60min_R1 2 FVQSTQNNGTLK 12 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 FVQSTQNNGT(1)LK;FVQSTQNNGT(1)LK 232.37 9.6333e-41 25246000.0 6333.6 6679.2 6847.5 6825.5 9157.3 8034.2 6245.0 6997.7 10356.5 8847.9 8609.599999999999 True False 7402.556838346956 7019.142750830179 7818.578465085824 8497.747806408333 7810.273300601955 8884.373711329657 7379.635663410654 7989.64540455747 8010.769285932111 6849.15324486657 6471.598707128187 1.1438528829349939 1.0846072305285084 1.2081370954713242 1.3130832412473954 1.2068537704600373 1.3728251879313689 1.1403110726384045 1.2345705854346656 1.2378346755506633 1.0583402270172475 1.0 12.659906436128157 -10.690696083823376 0.8147979371434758 0.9909936412253622 1.2184433724686905 0.4559103171839769 0.07764131731565482 0.44743708578514807 0.49512337437305937 0.0646668950149758 0.014571354763633419 2.038468084099115e-11 10.690696083823376 0.22744973124332835 FVQSTQNNGT(ph)LK ddPTM_A549_PD325901_60min_R1 2 FVQSTQNNGTLK 12 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 FVQSTQNNGT(1)LK;FVQSTQNNGT(1)LK 245.03 5.432500000000001e-51 36656000.0 10950.6 11133.6 12121.9 11213.8 15052.0 12577.8 13004.8 13875.3 14016.599999999999 14081.7 14245.0 True False 12062.296850594359 12071.867545372605 12944.565028906298 11906.450957612395 13994.799446581024 12475.370566956299 13499.704780499622 13598.546256537715 13427.531046039485 13192.57905880205 12492.95530649501 0.9655278958953167 0.9662939832256116 1.0361491505678002 0.9530531940206577 1.1202152815919557 0.998592427563591 1.080585373861156 1.088497150827708 1.0748082192416548 1.0560014612349817 1.0 13.608827177687488 -6.730697629215469 24.999995850632992 1.0457287628322474 0.983251131499183 0.4470172935051193 0.04064061602472628 195.4712673088372 158961.3579759899 0.006313348553820855 0.013141150825501916 1.8590983729580012e-07 6.730697629215469 -0.06247763133306439 FVS(ph)EGDGGR ddPTM_A549_MK2206_60min_R1 2 FVSEGDGGR 9 0 Q53EL6;Q53EL6-2 Q53EL6 PDCD4 Programmed cell death protein 4 1 FVS(1)EGDGGR;FVS(1)EGDGGR 152.37 1.8977e-05 152793000.0 10279.1 10794.099999999999 9589.0 11227.900000000001 15370.7 11921.1 11745.5 11195.4 18581.7 18990.9 18479.5 True False 12013.96078013329 11343.473584671223 10948.864388712378 13978.736004039578 13109.690391443168 13182.58288941425 13879.50531378541 12782.382234474568 14372.974618877497 14700.842500247136 13890.53014174588 0.8649029704076704 0.8166335963362648 0.7882250912661157 1.0063500716958678 0.9437861807767858 0.9490338205160362 0.9992063061778085 0.9202227779672036 1.034731898077936 1.058335596282678 1.0 13.761814041379365 -6.452893580600566 0.7014861364506464 1.009133794319385 0.7998639912555604 0.6304626875893531 0.05142207864081921 0.44298606758856013 0.33101687585987466 0.008607872814876266 0.05377330242854686 3.5245722648285406e-07 6.452893580600566 -0.2092698030638246 FVS(ph)FTSR ddPTM_A549_MK2206_60min_R1 2 FVSFTSR 7 0 Q8N5V2-3;Q8N5V2 Q8N5V2-3 NGEF Ephexin-1 1 FVS(0.996)FT(0.004)SR;FVS(0.694)FT(0.306)SR 99.802 0.011342 12447000.0 2073.35 2771.6 2555.4 1495.22 2742.9 1944.4099999999999 1680.77 2146.46 2520.3 2866.9 2622.1000000000004 True False 2423.280791459306 2912.6626015392444 2917.794145261822 1861.5489671229768 2339.42304349766 2150.166175605102 1986.1441527607258 2450.7272782580594 1949.4560740920867 2219.265298851476 1970.9602037215225 1.2294925016160763 1.4777886413128083 1.4803922168253367 0.9444883583179621 1.1869458546552154 1.09092318127236 1.0077038333957902 1.2434179409765107 0.9890895160699683 1.1259817903279374 1.0 10.944682931427437 -6.260460062648402 24.999972113257773 1.0313042767122667 1.404080885682226 0.6123389477897022 0.11050634402479843 35.518329858034306 906692.9747992691 0.01493904585338559 0.03718947228938569 5.489590350924789e-07 6.260460062648402 0.37277660896995934 FVS(ph)FTSR ddPTM_A549_PD325901_60min_R1 1 FVSFTSR 7 0 Q8N5V2-3;Q8N5V2 Q8N5V2-3 NGEF Ephexin-1 1 FVS(0.999)FT(0.001)SR 101.54 0.010915000000000001 13337000.0 1579.4 1458.6 1278.7 1305.4 1880.0 1348.6 1574.9 1604.7 1370.6 1615.2 2099.2 True False 1739.7395253071732 1581.521340957145 1365.4802714477498 1386.0315932214974 1747.9552856479077 1337.6174487269047 1634.8336813183478 1572.6929996372028 1312.99844838989 1513.2159963482436 1841.0117079251913 0.9449910165252826 0.8590501267042508 0.7417010253490661 0.7528640840549278 0.9494536499269971 0.7265665084956963 0.8880083023267653 0.8542547518123162 0.7131939697817734 0.8219480570569693 1.0 10.846283086206997 -11.031978588786378 1.3289495085272167 0.999873685474716 0.8126346452173001 0.0 0.09550067459592898 0.3503986569578351 1.1039732119289618 0.05853690813555734 0.013191769549533048 9.29012187012034e-12 11.031978588786378 -0.1872390402574159 FVSEDDRNS(ph)FTLK ddPTM_A549_MK2206_60min_R1 4 FVSEDDRNSFTLK 13 1 P34932;A0A087WYC1 P34932 HSPA4 Heat shock 70 kDa protein 4 1 FVSEDDRNS(0.999)FT(0.001)LK;FVS(0.02)EDDRNS(0.939)FT(0.041)LK;FVS(0.029)EDDRNS(0.97)FT(0.001)LK;FVSEDDRNS(0.94)FT(0.06)LK 123.4 1.6457e-06 86204200.0 10536.21 10489.789999999999 10510.83 8772.55 15946.5 12340.04 10278.800000000001 11624.760000000002 16588.399999999998 14047.0 13662.199999999999 True False 12314.464662397306 11023.675505484325 12001.423744166195 10921.825143814734 13600.790974200821 13645.854842144388 12146.32490905772 13272.605329334416 12831.153886231468 10873.77294393481 10269.498682462214 1.1991300688735071 1.0734385237626118 1.1686474788357182 1.0635207697593394 1.3243870411539795 1.3287751684946572 1.1827573365193245 1.2924297222025816 1.249443062702168 1.0588416513947803 1.0 13.326078136085938 -10.753906966754979 1.0079170135696973 1.0001680152163421 1.209568638849432 0.38927896332106426 0.08587088682172511 0.41267493970990166 0.7455717259093778 0.06117761018692237 0.015674081177074868 1.7623535319998786e-11 10.753906966754979 0.20940062363308987 FVSEDDRNS(ph)FTLK ddPTM_A549_PD325901_60min_R1 4 FVSEDDRNSFTLK 13 1 P34932;A0A087WYC1 P34932 HSPA4 Heat shock 70 kDa protein 4 1 FVSEDDRNS(0.892)FT(0.108)LK;FVSEDDRNS(1)FTLK;FVSEDDRNS(1)FTLK;FVSEDDRNS(1)FTLK 165.89 8.897e-20 145576200.0 25100.199999999997 24448.5 25615.4 26177.5 30240.8 23894.3 26946.399999999998 26040.4 28018.499999999996 27141.5 29880.699999999997 True False 27648.353826209364 26508.860897018207 27353.81508191343 27794.424721583993 28116.790533096402 23699.712742929907 27971.85999763588 25521.003793701402 26840.97988195837 25427.781058002645 26205.56332936368 1.0550566488005628 1.0115737854532088 1.0438170986106268 1.060630690218362 1.0729321167307695 0.9043771524794534 1.0674015912603199 0.9738773203591004 1.024247391464495 0.9703199560495799 1.0 14.67758550183358 FVSFT(ph)SR ddPTM_A549_PD325901_60min_R1 1 FVSFTSR 7 0 Q8N5V2-3;Q8N5V2 Q8N5V2-3 NGEF Ephexin-1 1 FVS(0.169)FT(0.828)S(0.003)R 106.04 0.010216 12324000.0 1611.5 1834.1 1564.6 1085.6 2316.1 1600.3 1705.6 1812.2 1787.7 1861.2 1853.4 True False 1775.098293676401 1988.6660437745095 1670.7831647041126 1152.6550464235147 2153.4251261112327 1587.2676873777734 1770.5075413401314 1776.0542493566031 1712.569185894212 1743.6835143656206 1625.4435496706112 1.0920700962122718 1.2234605404644805 1.0278936878753429 0.709132622081582 1.3248230777055374 0.9765135723719387 1.0892457887565008 1.0926582161013911 1.0536011455096403 1.072743199675541 1.0 10.666617737937706 -14.999999999996662 0.17633343173103708 0.7281328589820497 1.0785123956882625 0.0 0.1465875964464465 181.01982831444062 1.9862818915160012 16.87908548223676 0.1686048915299854 1.0000000000076856e-15 14.999999999996662 0.3503795367062128 FVSRPPT(ph)PK ddPTM_A549_MK2206_60min_R1 2 FVSRPPTPK 9 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 FVSRPPT(1)PK;FVS(0.005)RPPT(0.995)PK 57.175 0.005558 68998000.0 7044.4 7395.1 8314.0 8946.5 12769.1 7980.3 8772.0 8588.6 13053.2 12235.2 12267.3 True False 8233.322500955428 7771.479002974043 9493.05021668106 11138.392901623649 10890.782305124489 8824.770049105586 10365.758853392836 9806.060351484384 10096.671041677118 9471.259822284554 9220.990849743728 0.8928891303676166 0.8428030273113253 1.0295043527719034 1.2079388303409073 1.1810859030867782 0.9570305613469777 1.1241480468100586 1.063449743229809 1.0949659538982979 1.0271412233911696 1.0 13.170706069720715 -5.831508142363181 5.232710081766725 1.066452658889377 0.8679961060655064 0.5550185181947516 0.0719624282513196 0.1128478673384965 5.641783885846413 0.010539456367814257 0.03493363895898635 1.4739809058072028e-06 5.831508142363181 -0.19845655282387065 FVSRPPT(ph)PK ddPTM_A549_PD325901_60min_R1 4 FVSRPPTPK 9 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 FVS(0.019)RPPT(0.981)PK;FVSRPPT(1)PK;FVS(0.029)RPPT(0.971)PK;FVS(0.015)RPPT(0.985)PK 67.456 0.001943 135446000.0 16692.7 16855.8 17131.6 17989.5 21609.2 20978.699999999997 17997.5 20428.2 21882.9 19533.5 20138.0 True False 18387.330615483752 18276.297421435247 18294.253396679658 19100.670557881193 20091.44433969298 20807.856422665813 18682.40471110989 20020.74352538712 20963.237812834628 18300.151476392042 17661.153665299866 1.041117186563563 1.0348303269306804 1.0358470201538243 1.0815075232265063 1.1376065641265598 1.1781708498210113 1.0578247075567069 1.1336033820216007 1.186968768298676 1.036180977936207 1.0 14.108291965618788 -6.368920226479236 3.9028658109285885 1.1012964061788668 1.0369247312867516 0.22491762140681737 0.05401969686561195 0.3821211404622738 10.300606191248418 0.010326288233381832 0.02534812209825248 4.276414303905229e-07 6.368920226479236 -0.06437167489211526 FVSSFS(ph)R ddPTM_A549_MK2206_60min_R1 2 FVSSFSR 7 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FVS(0.003)S(0.016)FS(0.982)R;FVSS(0.001)FS(0.999)R 78.113 0.016921000000000002 19704400.0 3828.6000000000004 3836.3 3834.8 3777.2000000000003 4930.3 3644.5 3588.5 4038.3 6388.200000000001 5134.8 5173.3 True False 4474.7740797169345 4031.551283837859 4378.632303455443 4702.6141695649485 4205.059401128916 4030.158570976695 4240.483999703628 4610.741391775073 4941.282899859176 3974.845113726522 3888.626834183498 1.1507337346903102 1.036754478058415 1.1260098976236255 1.2093251345760372 1.0813738577751342 1.0363963277599804 1.0904836541339173 1.1856991139503872 1.2707012296531421 1.0221719088046994 1.0 11.925045080168662 FVSSFS(ph)R ddPTM_A549_PD325901_60min_R1 3 FVSSFSR 7 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FVS(0.002)S(0.008)FS(0.99)R;FVSSFS(1)R;FVS(0.001)S(0.002)FS(0.997)R 101.25 0.010997 16841700.0 3537.83 3470.27 3204.0600000000004 3127.6499999999996 4450.9 3710.9300000000003 3941.2 4035.1 5185.5 4980.8 5119.6 True False 3896.987897187208 3762.721831813624 3421.506779177977 3320.8378370914784 4138.284138771424 3680.709416434919 4091.184522707392 3954.6167650252887 4967.571468061999 4666.311437971353 4489.921655818312 0.8679411793605031 0.8380373022628717 0.7620415324494988 0.7396204414364639 0.921682928121649 0.819771412194962 0.9111928528654365 0.8807763404737046 1.106382660736345 1.0392857149131913 1.0 12.132474556410582 -8.63967182116471 4.613655643864054 1.0499956275864613 0.8369998565794384 0.7260556298302852 0.05668024550973715 0.08729394814209317 3.1675665261282693 0.011082923425399011 0.01255553187470777 2.2925994233494107e-09 8.63967182116471 -0.21299577100702283 FVSSFS(ph)RR ddPTM_A549_MK2206_60min_R1 2 FVSSFSRR 8 1 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FVS(0.008)S(0.116)FS(0.876)RR;FVS(0.013)S(0.111)FS(0.876)RR 65.347 0.0037614000000000002 5564000.0 820.43 739.1500000000001 724.86 635.94 1112.01 678.31 753.02 581.0 1049.81 832.5699999999999 873.04 True False 958.8985264123082 776.7695778350892 827.656047638133 791.7453285484319 948.4348020707399 750.0883139742632 889.8339867512398 663.3585292378766 812.0297112020852 644.4918587550226 656.2400733217792 1.4612008095734261 1.1836667850885874 1.2612092453432087 1.206487321843586 1.4452558455778526 1.1430090061057072 1.3559580143392442 1.0108473350005356 1.2373973248718637 0.9820976879584798 1.0 9.358079884541409 -14.999999999990305 0.13654813342565916 0.09877481321772916 1.3588682792763915 0.48876395755082247 0.11488187464282176 44.912982630397025 0.4145733675817172 10.98059531286064 0.2713501569369429 1.0000000000223244e-15 14.999999999990305 1.2600934660586625 FVVPKPR ddPTM_A549_MK2206_60min_R1 2 FVVPKPR 7 1 F8VVM2;Q00325-2;Q00325 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial 0 ; 71.029 0.021044999999999998 3614700.0 1504.76 1744.62 1608.52 1281.71 2650.5 2081.04 2300.9 1935.0 2916.1 2309.49 2223.5 False True 1758.726700150147 1833.4137061254867 1836.6323231339686 1595.7290075381486 2260.614961096118 2301.2542715174473 2718.9437466679888 2209.2921756889677 2255.6080060548097 1787.7746049895354 1671.3435845218742 1.052283154964376 1.0969699606379717 1.0988957268528237 0.9547582090935798 1.352573451701625 1.3768888054072816 1.6268011986570698 1.3218659503341954 1.3495776852490073 1.0696631270469554 1.0 10.706792628912254 -6.760214935534589 24.99997052364144 1.243314278033493 1.0574704935180579 0.3126264116337798 0.16445884870324665 49.139444734800094 1003261.5664309934 0.029729179246999676 0.059294881775918726 1.7369409911201993e-07 6.760214935534589 -0.18584378451543504 FVVPKPR ddPTM_A549_PD325901_60min_R1 2 FVVPKPR 7 1 F8VVM2;Q00325-2;Q00325 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial 0 ; 79.939 0.016267 8168000.0 3622.3 4104.9 4426.9 4224.5 4959.1 4432.0 4735.0 4641.6 4966.9 4302.4 4558.1 False True 3990.033229403679 4450.834329147801 4727.336055112259 4485.437770464389 4610.789923966247 4395.907261424918 4915.193016091417 4549.019646735243 4758.1584658600195 4030.7457297478236 3997.4825961765496 0.9981364855021518 1.113409307498891 1.1825782705430132 1.1220656156838686 1.1534233891040087 1.0996688930251872 1.2295720863907262 1.1379710948801176 1.1902887258123473 1.0083210202348571 1.0 11.964876037325933 -10.891999595994795 1.1291643558214015 0.9996009468165928 1.1427030420549504 0.44020678746917086 0.05699701192794589 0.355603352275228 0.8014367035492993 0.03992172313561757 0.009451355129469029 1.2823317755527596e-11 10.891999595994795 0.1431020952383576 FYAFGR ddPTM_A549_MK2206_60min_R1 2 FYAFGR 6 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 135.03 0.028987 8550700.0 3065.1000000000004 3548.5 3811.6000000000004 3423.4 5396.200000000001 4581.1 4215.200000000001 3797.3999999999996 6070.7 4742.4 4715.200000000001 False True 3582.41394549976 3729.1034931310464 4352.142194599657 4262.133153682267 4602.4261283029155 5065.8689613119295 4981.047277567428 4335.693079049764 4695.6961429158555 3671.088546260158 3544.2857071003077 1.0107576650277006 1.0521452843546137 1.227932100925431 1.2025365633317562 1.2985482855072386 1.4293060379312583 1.4053740835815915 1.2232910767786074 1.3248638882325188 1.03577669794109 1.0 11.791279189797383 -4.074125360441003 11.985248369618171 1.1946518537876687 0.5322738652012753 0.0 0.1496850905337234 0.0 0.0 0.02262552748734226 0.0 8.430913617168948e-05 4.074125360441003 -0.6623779885863934 FYAFGR ddPTM_A549_PD325901_60min_R1 1 FYAFGR 6 0 P13639 P13639 EEF2 Elongation factor 2 0 130.51 0.033895999999999996 7894700.0 2431.7 3203.9 3032.9 2769.2 3460.3 3399.9 3312.8 3038.7 3363.5 3570.1 3331.3 False True 2678.564393877073 3473.9038970880288 3238.7308323092843 2940.247194690491 3217.260465386946 3372.2123416332506 3438.8704168337176 2978.0907446859665 3222.143791886325 3344.683276722921 2921.571218850603 0.9168232410678206 1.1890532993594873 1.1085578922096095 1.0063924424362434 1.1012089811908377 1.154246153533761 1.1770619845394796 1.0193455923547874 1.1028804538791876 1.1448234618216075 1.0 11.512528742807008 -10.759021763152118 0.7788924336027003 0.993568660883074 1.0918846089045304 0.0 0.08758059943566365 1.1103285049783846 1.0640589791095851 0.06937267212821592 0.013633599007636927 1.7417195910066248e-11 10.759021763152118 0.09831594802145638 FYDPS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 FYDPSPPR 8 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802;A0A2R8Y4W8;A0A2R8YG73;A0A2R8Y4X4 Q3V6T2 CCDC88A Girdin 1 FYDPS(1)PPR;FYDPS(1)PPR 109.44 0.0016722999999999998 39547000.0 9288.099999999999 9516.3 7708.0 8380.6 13746.2 10962.400000000001 10104.8 9585.1 15347.1 14808.7 16090.3 True False 10855.7042077571 10000.6390225963 8801.110304327358 10433.847376219437 11724.152189481027 12122.433891747822 11940.711361350197 10943.817278137649 11871.0063542827 11463.404384911184 12094.634440311354 0.8975636478581853 0.826865753731607 0.7276871696918182 0.8626839800501516 0.9693680488931925 1.002298494557538 0.9872734409856876 0.904848950346276 0.9815101409528093 0.9478090835638419 1.0 13.56207954414467 -6.697577601875225 3.578347923337231 0.9842210858066694 0.8154211981016032 0.6890473151094676 0.04584671557644719 0.0856219294641728 2.2032401431942406 0.006392039518740272 0.013697462644975658 2.006422540532138e-07 6.697577601875225 -0.16879988770506626 FYDPS(ph)PPR ddPTM_A549_PD325901_60min_R1 4 FYDPSPPR 8 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802;A0A2R8Y4W8;A0A2R8YG73;A0A2R8Y4X4 Q3V6T2 CCDC88A Girdin 1 FYDPS(1)PPR;FYDPS(1)PPR;FYDPS(1)PPR;FY(0.022)DPS(0.978)PPR 85.73299999999999 0.0029230000000000003 64236400.0 12458.5 11909.1 12243.099999999999 12661.3 14770.3 12744.0 12265.3 13992.1 13555.2 14054.6 13637.1 True False 13723.27774853705 12912.721651990078 13073.990389741104 13443.35974510138 13732.885082768777 12640.217089259726 12732.06270332969 13713.0165889099 12985.52208347778 13167.190157426952 11959.823152699417 1.1474482166937066 1.0796749656850557 1.093159173243311 1.1240433552788043 1.1482515173871253 1.0568899663375657 1.0645694790608984 1.1465902475167264 1.0857620482913959 1.1009519111873343 1.0 13.54590843642578 -10.447178883023382 0.4672131388814123 0.9813982395572647 1.1094300735671963 0.01020563657462814 0.04331773699111603 0.7565799829230114 0.25097702680306305 0.043963311257102414 0.008531899785755963 3.571257101365665e-11 10.447178883023382 0.12803183400993157 FYDS(ph)NTVK ddPTM_A549_MK2206_60min_R1 1 FYDSNTVK 8 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 FYDS(0.996)NT(0.004)VK 98.04 0.0024446999999999997 13558000.0 3728.3 3793.7 3484.2 3117.7 5132.5 3591.0 3200.0 4020.4 6079.9 5190.9 6096.6 True False 4357.5458918164995 3986.7831257971684 3978.3119515227527 3881.5366399588706 4377.516048981637 3970.997236487122 3781.398578529081 4590.304011958623 4702.812357605237 4018.272084763379 4582.645962399846 0.9508798906940945 0.8699740626939823 0.8681255292606949 0.8470077487561755 0.9552376694378576 0.8665293520531062 0.8251561673223461 1.0016710977940715 1.0262220551601289 0.8768454115227101 1.0 12.161965117609853 -8.337887824203937 7.298888605843459 1.0122332586874483 0.8830165457906481 0.33162012298921095 0.05549877587345265 0.10250015162601692 8.622595880862344 0.006015966974581974 0.007279888767843151 4.593166363926506e-09 8.337887824203937 -0.12921671289680015 FYDS(ph)NTVK ddPTM_A549_PD325901_60min_R1 2 FYDSNTVK 8 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 FYDS(0.997)NT(0.003)VK;FYDS(0.839)NT(0.161)VK 112.36 0.0014449000000000003 11254000.0 9602.1 9766.1 9926.3 10650.5 11821.099999999999 12457.2 11812.5 11610.7 12626.9 12272.4 12215.8 True False 10576.898123307583 10589.123521130938 10599.958409690937 11308.35719595951 10990.826716581108 12355.752693371498 12262.031151548017 11379.115480082053 12096.235304227563 11497.51856957911 10713.334042336392 0.9872648497200173 0.9884059882092162 0.9894173343053224 1.0555404275897435 1.0259016169147845 1.1533060244873055 1.1445579035519255 1.062145120754628 1.1290822498791033 1.0731970574373784 1.0 13.387119903318135 -6.414062719915802 1.7819057405560903 1.0742684824683697 0.9852342770891853 0.45876782492444057 0.04477724247974739 0.3701435927814224 2.2679099239076637 0.008690718156809206 0.026599550134030443 3.854226916939045e-07 6.414062719915802 -0.08903420537918438 FYDSNT(ph)VK ddPTM_A549_MK2206_60min_R1 3 FYDSNTVK 8 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 FYDS(0.011)NT(0.989)VK;FYDS(0.058)NT(0.942)VK;FYDS(0.001)NT(0.999)VK 102.06 0.0023813000000000003 20273000.0 8122.7 9618.900000000001 9368.8 7927.4 12382.8 9547.8 8466.8 9623.8 13456.1 13242.099999999999 13174.7 True False 9493.613179051541 10108.460924356275 10697.436717589788 9869.613355874513 10561.306523395968 10558.141858683293 10005.107963965633 10988.003121651416 10408.314834976214 10250.700412962131 9903.058386777746 0.9586546709375274 1.0207413234938387 1.0802154546390104 0.9966227573748442 1.0664691765825691 1.06614961220265 1.0103048546420912 1.1095565321842649 1.0510202432889895 1.0351045114152357 1.0 13.273658429857697 -5.299580762210278 4.002546791079128 1.0362666478323934 0.954295501080067 0.32440101711210756 0.034296176975619735 0.20986096169655813 6.577189794984642 0.00496439229859467 0.0456910845548928 5.016712786370019e-06 5.299580762210278 -0.08197114675232642 FYDSNT(ph)VK ddPTM_A549_PD325901_60min_R1 1 FYDSNTVK 8 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 FYDS(0.138)NT(0.862)VK 67.726 0.008343799999999998 6393000.0 4286.5 3426.7 4282.6 4306.0 5027.2 5215.9 3583.1 4847.7 4346.8 5181.9 4937.4 True False 4721.662324445481 3715.4800350046967 4573.242989365869 4571.971840364458 4674.106814898491 5173.4234397261325 3719.456831247554 4751.00882055292 4164.119112404183 4854.713949651414 4330.131100757351 1.0904201777215592 0.8580525505001106 1.0561442328076387 1.0558506737971072 1.0794377135789208 1.1947498399808927 0.8589709513869017 1.097197454303856 0.9616612096746604 1.1211471054080353 1.0 12.080194989879502 -7.774000498496328 24.996808642129754 0.9835364885387105 1.0478841515506947 0.026538168267138174 0.09939082335567406 393.00664949061024 782087.5548033084 0.013549878038113888 0.01879031160280461 1.6826721296474495e-08 7.774000498496328 0.06434766301198425 FYDSNT(ph)VKQK ddPTM_A549_PD325901_60min_R1 2 FYDSNTVKQK 10 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 FYDS(0.017)NT(0.983)VKQK;FYDSNT(1)VKQK 102.62 0.00015592 15190600.0 7275.5 6975.5 7782.0 7238.9 9310.9 9850.4 7959.6 9338.8 9591.7 9211.0 8212.1 True False 8014.103404059979 7563.3498655193835 8310.133316967536 7686.030412265279 8656.934504861232 9770.181608289711 8262.50693366025 9152.53030785313 9188.594205035248 8629.415888040907 7202.063760790993 1.1127509655898686 1.0501642469059052 1.1538544496383139 1.0671983291940659 1.2020074790216038 1.3565808263847785 1.1472415696515286 1.27082050532248 1.2758279446315366 1.198186544115398 1.0 12.814194656610411 -6.758631843963761 24.996818264708946 1.1667210971378137 1.0968516186631032 0.17282505171638296 0.09330275118315043 179.15875825548503 1595099.1987874522 0.01809625807672089 0.03641277726448819 1.7432840475626186e-07 6.758631843963761 -0.06986947847471048 FYEAFSK ddPTM_A549_MK2206_60min_R1 2 FYEAFSK 7 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 132.69 0.015633 19222000.0 12448.3 13237.900000000001 12021.5 11596.099999999999 16090.0 12838.1 11718.6 12377.3 18171.6 17380.699999999997 17260.7 False True 14549.268708285099 13911.65256635748 13726.329465940751 14437.145020568703 13723.182314294107 14196.61922075892 13847.717931984644 14131.820178891503 14055.761614082367 13454.387798579603 12974.391818914648 1.121383484586501 1.0722392818503024 1.0579555217324248 1.112741562153348 1.0577129553223326 1.0942030592958087 1.067311526062965 1.0892086793840698 1.0833464728258977 1.0369956439087338 1.0 13.663379292668234 -10.676825270754467 0.6273764612490215 0.9898811378021497 1.084286813407646 0.5433618266474034 0.022178478210894453 0.4022486805398541 0.2357800637273327 0.021070216783565875 0.003783807550230017 2.1046250210406198e-11 10.676825270754467 0.09440567560549629 FYEAFSK ddPTM_A549_PD325901_60min_R1 2 FYEAFSK 7 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 119.21 0.018791 31609000.0 22986.0 22866.0 23585.0 23892.0 27336.0 26754.0 25661.0 27605.0 27332.0 27000.0 27687.0 False True 25319.521798601145 24792.99806823397 25185.619928126358 25367.754577331074 25416.01366408042 26536.124294260415 26637.54339723799 27054.396619296444 26183.331089590294 25295.215392151167 24281.674522353627 1.042741997686036 1.0210580018033608 1.0372274739512122 1.0447283837025987 1.0467158531707739 1.092845728980979 1.0970225044700093 1.1141899045879335 1.0783165331322602 1.0417409791431178 1.0 14.567580296274551 -6.408118600875736 2.257126910213155 1.0531013707528587 1.0319020301275224 0.09130274081538015 0.031780381119946605 0.9577312949984629 9.46114082966779 0.006336729989356009 0.017528596393598602 3.9073417616865094e-07 6.408118600875736 -0.02119934062533635 FYEEVHDLER ddPTM_A549_MK2206_60min_R1 2 FYEEVHDLER 10 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;P55209;F8W118;P55209-2;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8W020;H0YH88;F8VRJ2;F8VXI6;F8VUX1;F8W543;P55209-3;F8VVB5 E9PNJ7;P55209 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 0 ; 111.86 0.00016067 16681300.0 1419.96 1586.67 1933.3200000000002 1550.71 2501.2 1855.23 1609.76 1627.08 2486.8999999999996 2288.5 2379.7 False True 1659.6145333110944 1667.4247257844834 2207.493847114966 1930.6340196140177 2133.2767933196037 2051.549207197995 1902.2325549290542 1857.7235727235181 1923.621120763248 1771.5262605677228 1788.7548136211833 0.9278043702095452 0.932170643560099 1.2340952657709865 1.0793173021324325 1.1926043620259865 1.146914709369702 1.063439516944273 1.0385568545097097 1.075396754275696 0.9903684099563189 1.0 10.804739933977729 -10.377959286445101 0.6225189034501762 0.99629666194466 1.083472814666765 0.1073670617154916 0.08951984881223211 1.7545057611872075 1.1681229810990827 0.07938797241434886 0.02024567017133715 4.1883282735760924e-11 10.377959286445101 0.08717615272210488 FYEEVHDLER ddPTM_A549_PD325901_60min_R1 2 FYEEVHDLER 10 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;P55209;F8W118;P55209-2;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8W020;H0YH88;F8VRJ2;F8VXI6;F8VUX1;F8W543;P55209-3;F8VVB5 E9PNJ7;P55209 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 0 ; 119.27 6.4306e-05 26667000.0 1563.77 1702.28 1160.9499999999998 1204.12 1481.22 1442.3600000000001 1680.7 1442.37 1466.4099999999999 1806.0900000000001 1554.9699999999998 False True 1722.52277921337 1845.7371097521795 1239.7390483594781 1278.495757645066 1377.1842171315927 1430.6138983729331 1744.65995821433 1413.6007988326253 1404.7818872781404 1692.0531691707522 1363.718547766975 1.2631072460178239 1.3534589763954499 0.9090871796013132 0.937507053591478 1.0098742290971015 1.0490536340621723 1.2793401989517035 1.036578112945175 1.0301113008827258 1.2407642118979827 1.0 10.413330207880907 -5.7525246941092005 24.99793584121157 1.0253112964161175 1.30828322589981 0.4141639973933795 0.11194264925192797 98.6332470393627 276574.1474782312 0.012712775234360105 0.047803128806277524 1.767971687497408e-06 5.7525246941092005 0.28297192948369254 FYEQFSK ddPTM_A549_MK2206_60min_R1 2 FYEQFSK 7 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 109.86 0.023703000000000002 13989500.0 7979.0 8588.4 8690.599999999999 7858.5 11184.2 8727.0 7907.299999999999 8437.9 11527.1 10556.400000000001 11568.099999999999 False True 9325.660132179233 9025.512875977643 9923.05775957282 9783.832852781474 9539.018995620152 9650.485347486245 9343.954056250936 9633.99816498499 8916.230254996193 8171.701908261788 8695.421506682022 1.0724793645728274 1.0379615144639005 1.1411819141771813 1.125170625169011 1.0970162847528284 1.1098352552628188 1.0745832216495252 1.1079391789784678 1.0253936796674539 0.9397706484938333 1.0 13.086040247888118 -8.849057646194188 4.118922326151069 1.010823207447577 1.096206881127928 0.6484826009975289 0.034215149818199224 0.09641836928328568 2.981763378635327 0.004984874625017609 0.005287321624303592 1.4156058666627446e-09 8.849057646194188 0.08538367368035105 FYEQFSK ddPTM_A549_PD325901_60min_R1 2 FYEQFSK 7 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 116.9 0.019591 31158000.0 15773.4 15223.400000000001 16730.9 15825.3 19021.4 17957.1 16407.1 17993.3 18106.5 16861.6 19315.7 False True 17374.703956236634 16506.329344526952 17866.359485074805 16802.79283913602 17685.402484267608 17810.863331257522 17031.481168809612 17634.409516029213 17345.54677204987 15796.955698381336 16939.99135231069 1.0256619141583354 0.9744001045357921 1.0546852777842624 0.9919009100818721 1.0440030408784855 1.0514092339739027 1.005400818370928 1.0409928287019934 1.023940709962869 0.932524425180805 1.0 14.048145517738943 -3.699563034315813 17.860380081665426 1.0170454023802054 1.015977616857883 0.0 0.03572676711315021 0.0 0.0 0.003112402854984227 0.0 0.000199727085976493 3.699563034315813 -0.0010677855223224508 FYETKEES(ph)YSPSKDR ddPTM_A549_MK2206_60min_R1 1 FYETKEESYSPSKDR 15 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 FYET(0.01)KEES(0.451)Y(0.014)S(0.451)PS(0.073)KDR 47.751999999999995 0.0092926 20512000.0 2291.5 2003.4 2432.4 1853.9 3141.2 1903.4 1957.5 1966.5 3387.9 2895.6 3260.6 True False 2678.2491782038733 2105.3645027867374 2777.3508957246827 2308.105583224733 2679.133641122477 2104.8165246253357 2313.152411709585 2245.257397153674 2620.5460593645944 2241.4819489184606 2450.903032018 1.0927601554267463 0.8590158301992239 1.1331949324155413 0.9417368019347172 1.0931210276877248 0.8587922480524629 0.9437959729500212 0.9160939326534663 1.069216539834673 0.9145535011529573 1.0 11.259097690941854 -8.7791094947742 24.987591260606607 1.0326855831567676 0.9781729696891163 0.0 0.09608069970568484 479.18980352364105 677626.8781281728 0.014517265452924734 0.015470723119708511 1.6629933219143848e-09 8.7791094947742 -0.05451261346765135 FYETKEESYS(ph)PSKDR ddPTM_A549_MK2206_60min_R1 2 FYETKEESYSPSKDR 15 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 FYETKEES(0.003)YS(0.498)PS(0.498)KDR;FYETKEES(0.005)YS(0.497)PS(0.497)KDR 86.96 1.3362999999999999e-05 160105000.0 4979.0 5508.1 6108.7 4819.200000000001 6995.3 5039.1 5615.0 4740.700000000001 8237.400000000001 8540.5 8257.4 True False 5819.333475137287 5788.438763002714 6975.005515833488 5999.904216342111 5966.300636617879 5572.3342173161345 6635.172818262743 5412.708742784855 6371.642052424778 6611.195118365146 6206.859687353685 0.9375648505465698 0.9325873395843807 1.1237575629500502 0.9666569760819242 0.9612430338604336 0.897770289325151 1.0690064142712512 0.8720526990183308 1.0265484276061263 1.0651433174549256 1.0 12.599647817298251 FYETKEESYS(ph)PSKDR ddPTM_A549_PD325901_60min_R1 3 FYETKEESYSPSKDR 15 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 FYETKEES(0.006)YS(0.835)PS(0.159)KDR;FYETKEES(0.009)YS(0.495)PS(0.495)KDR;FYETKEES(0.002)YS(0.973)PS(0.025)KDR 94.057 7.5614e-06 263404000.0 9306.8 8746.4 8782.8 9431.7 11309.800000000001 12114.5 10367.9 11231.5 11168.0 10171.6 10662.8 True False 10251.619484695957 9483.489823493474 9378.853623266827 10014.274688055146 10515.438664691872 12015.843528549678 10762.456108032578 11007.478921558704 10698.647797766158 9529.363440103889 9351.34319705827 1.0962724037249425 1.0141312989642786 1.002941868951747 1.0708915796401761 1.1244843059550849 1.2849323648317819 1.150899489114913 1.1771013735247595 1.1440760511422274 1.0190368633996474 1.0 13.190957888652397 -4.846197293158875 18.57645527959692 1.0907753240226323 5.053608969291115 0.0 0.0853401074879877 12867.167048956997 1594959.5575107103 0.012971715960399652 57243.2844588609 1.4249601095556415e-05 4.846197293158875 3.962833645268482 FYETKEESYSPS(ph)KDR ddPTM_A549_MK2206_60min_R1 1 FYETKEESYSPSKDR 15 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 FYET(0.002)KEES(0.103)Y(0.009)S(0.396)PS(0.489)KDR 46.621 0.0062446 125920000.0 1946.4 2087.0 2146.1 1715.2 2794.2 2145.6 1806.1 1557.5 2570.7 2844.0 2721.9 True False 2274.9047350888163 2193.2193857022658 2450.449250663848 2135.4240769982543 2383.176881454357 2372.6459678659867 2134.2449914629287 1778.2803946437048 1988.4405545643483 2201.538424756219 2045.9771093816462 1.1118915869866983 1.0719667271180373 1.1976914303818604 1.0437184596085933 1.164811116667196 1.1596639849910488 1.043142165020585 0.8691594771464246 0.9718782020808204 1.0760327741015576 1.0 10.998574288803823 -7.980391564847334 6.320503616112843 0.9764950599563044 1.1227438819373947 0.5637356536504232 0.060101545357837946 0.07588553238563549 11.212414338300901 0.007981150349422128 0.010929233714729668 1.046184870514352e-08 7.980391564847334 0.14624882198109035 FYGDEEKDK ddPTM_A549_MK2206_60min_R1 2 FYGDEEKDK 9 1 P27797;K7EJB9 P27797 CALR Calreticulin 0 ; 66.435 0.0054273 7436000.0 4760.299999999999 5120.9 4807.3 4200.5 7141.1 5735.1 4537.9 5218.5 7805.0 7113.9 7479.0 False True 5563.72226183893 5381.531936867631 5489.047426828348 5229.622688567613 6090.653649757971 6341.984475348726 5362.377690470971 5958.238355985988 6037.179962023866 5506.865049181878 5621.757890100785 0.9896766048278158 0.9572685345172617 0.976393422508265 0.9302468713169465 1.083407320063152 1.1281141236117924 0.9538613713538696 1.0598532474117577 1.0738954042568407 0.9795628265811271 1.0 12.456805607773402 -6.757624528559729 24.99997487150794 1.041301042625013 0.9638870174727857 0.36459842105095197 0.048501260868324035 82.30654658260976 539374.5471937527 0.006858760205766477 0.013863867144147267 1.7473321647393237e-07 6.757624528559729 -0.0774140251522274 FYGDEEKDK ddPTM_A549_PD325901_60min_R1 2 FYGDEEKDK 9 1 P27797;K7EJB9 P27797 CALR Calreticulin 0 ; 79.97399999999999 0.0017284000000000002 15269800.0 9069.2 9164.5 9445.8 9232.5 12186.400000000001 9012.0 9257.400000000001 9648.2 9801.0 9997.6 11505.8 False True 9989.898507607828 9936.824577815549 10086.848790209708 9802.770556471169 11330.469304797694 8938.609259919078 9609.695422843663 9455.759082133525 9389.0980538956 9366.349829798915 10090.659541275561 0.9900144253945371 0.9847547166931205 0.9996223486631111 0.9714697554082773 1.1228670691396063 0.8858300315609645 0.9523357104196679 0.937080380470177 0.9304741692542252 0.9282197849888922 1.0 13.300732853877815 FYGNS(ph)LETVSSK ddPTM_A549_PD325901_60min_R1 1 FYGNSLETVSSK 12 0 Q8IY21 Q8IY21 DDX60 Probable ATP-dependent RNA helicase DDX60 1 FY(0.006)GNS(0.872)LET(0.119)VS(0.003)SK 56.202 0.016857 6491400.0 8634.8 8476.8 8918.4 10607.0 12423.0 12998.0 11300.0 10083.0 14903.0 10699.0 11831.0 True False 9511.398539396208 9191.169685332188 9523.656254695867 11262.170299755186 11550.45133702339 12892.148597473171 11730.027683597269 9881.886655039523 14276.67873657853 10023.463314097242 10375.862002888205 0.9166851425692278 0.8858222750816994 0.9178665109505967 1.08542020861691 1.1132040242833057 1.2425134985300053 1.1305111498526215 0.9523918737825176 1.3759511000247016 0.9660366831504823 1.0 13.340943576792876 -6.388952630013611 1.977305968015918 1.162384835891023 0.8948678974310659 0.30295626170592105 0.12233629627797951 0.28037754271020315 2.1160382552824393 0.021224596611141084 0.06291225626830074 4.0836392555543395e-07 6.388952630013611 -0.26751693845995705 FYPES(ph)SYK ddPTM_A549_PD325901_60min_R1 1 FYPESSYK 8 0 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 FYPES(0.5)S(0.5)YK 80.23899999999999 0.0039456 2392600.0 2105.3 1791.0 2042.7 2000.3 2452.4 2384.8 2154.8 2040.5 2263.8 2316.8 2687.8 True False 2319.0285061600543 1941.9338555150475 2181.3299057529675 2123.8539879890923 2280.151884320707 2365.3789794779213 2236.8020931518054 1999.800626758717 2168.66035857656 2170.51685261244 2357.217639368009 0.9837990635356889 0.8238245900941491 0.9253833287696768 0.9010003796503562 0.9673064744806661 1.0034622768698187 0.9489162374296131 0.8483733505807641 0.9200085398809409 0.9207961184247607 1.0 11.202869251880388 -10.579109441434403 0.9117072352810831 0.999262097508773 0.9236192367482814 0.0 0.05596166439739901 0.6785759981738101 1.0243870315136792 0.03270241288336451 0.009455336138028334 2.6356671187214962e-11 10.579109441434403 -0.07564286076049165 FYPESS(ph)YK ddPTM_A549_PD325901_60min_R1 1 FYPESSYK 8 0 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 FYPES(0.267)S(0.733)YK 84.615 0.0031311 1995700.0 2066.9 2466.0 2751.6 2253.8 3159.1 2889.3 2613.2 2596.2 2797.1 2968.6 3263.4 True False 2276.7301664286415 2673.8184744277532 2938.3401227149675 2393.0121072488214 2937.2157143033546 2865.770498744362 2712.646755997909 2544.416754320501 2679.5476141772656 2781.162089375553 2862.022488397042 0.795496952123458 0.9342409031612126 1.0266656305557786 0.8361262418273648 1.0262727585863334 1.0013095670500547 0.947807631489718 0.8890275197472591 0.9362426832914312 0.9717471126277638 1.0 11.482819292775384 -2.000122707768733 0.010824978186627206 1.7588144153124796 1.79296019537487e-05 0.13085588761360967 0.0674865187874948 13053.194038901114 10.6226071256486 731.3488853186248 1016.7881564198583 0.009997174948330223 2.000122707768733 -1.7587964857105258 FYSQQNQPNLDTQSGPESLLNS(ph)QSPESKPQTPSQTK ddPTM_A549_PD325901_60min_R1 1 FYSQQNQPNLDTQSGPESLLNSQSPESKPQTPSQTK 36 1 A6NHN7;A6NHB5;Q14202-2;Q14202 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 FYSQQNQPNLDT(0.068)QS(0.068)GPES(0.068)LLNS(0.39)QS(0.39)PES(0.015)KPQT(0.001)PSQTK 70.268 0.00011249 2393600.0 377.22 464.43 501.39 292.0 712.15 429.72 618.6 903.95 729.52 423.46 770.41 True False 415.51509670531317 503.5691460172267 535.4173405030009 310.0361768198844 662.1310407841264 426.22050279321184 642.1411615109084 885.9200081149432 698.8608113741374 396.7226633318644 675.6544540313673 0.6149816584884421 0.7453057446933495 0.7924425530067535 0.4588679538335301 0.9799847197534894 0.6308261571430779 0.9503987691925982 1.3112027943115052 1.0343464876229362 0.5871679835229008 1.0 9.400141795881979 -7.893786665304037 5.2454148479238105 1.0426844740910373 0.7122413068022115 0.2986181885739254 0.20047932141651034 0.11736020645881944 5.051322570136418 0.02172150106445606 0.03022419922834949 1.2770659767570746e-08 7.893786665304037 -0.3304431672888257 GAAAS(ph)PPRELTEPAAR ddPTM_A549_MK2206_60min_R1 1 GAAASPPRELTEPAAR 16 1 F8WC22;F8WD19;C9J4K5;C9JSP0;F8W8A5;Q9NYP3-2;Q9NYP3-3;Q9NYP3;H7C1C1 F8WC22 DONSON Protein downstream neighbor of Son 1 GAAAS(0.997)PPRELT(0.003)EPAAR 59.9 0.0012142000000000001 28016000.0 901.14 837.8 725.93 1146.7 957.64 729.11 679.55 736.18 1260.5 1346.4 1238.8 True False 1053.2304012422596 880.4404414668704 828.8777897276018 1427.641551477319 816.7724245780367 806.2639362559515 803.0154387623239 840.5357694566947 974.9987626048787 1042.2473048845884 931.1717708593195 1.1310806815699534 0.9455188280185595 0.8901448859029338 1.5331667004465126 0.877144744008175 0.8658595132366411 0.8623709007214337 0.9026645735630682 1.0470664952666189 1.119285761769565 1.0 9.862903512348046 -5.239984591748839 21.591792426951354 1.0063931118442582 1.1310814644321403 0.03718457191902036 0.18515510456950068 2255.0390736527897 2269199.9667168795 0.02354342766419219 1.1285352652853906 5.754603536232041e-06 5.239984591748839 0.12468835258788213 GAAAS(ph)PPRELTEPAAR ddPTM_A549_PD325901_60min_R1 2 GAAASPPRELTEPAAR 16 1 F8WC22;F8WD19;C9J4K5;C9JSP0;F8W8A5;Q9NYP3-2;Q9NYP3-3;Q9NYP3;H7C1C1 F8WC22 DONSON Protein downstream neighbor of Son 1 GAAAS(0.999)PPRELT(0.001)EPAAR;GAAAS(1)PPRELTEPAAR 80.382 8.0848e-05 68276000.0 8393.7 9868.8 9413.5 9081.2 12018.6 9885.099999999999 10075.1 10278.599999999999 10196.599999999999 12142.1 11531.9 True False 9245.822244884652 10700.478410556609 10052.356717974031 9642.125099098403 11174.454997919127 9804.599022994456 10458.513443806269 10073.585259594285 9768.07236163166 11375.445733816245 10113.549406737086 0.9142015204598296 1.058033928566023 0.9939494349310944 0.9533868586903184 1.1048994322878696 0.9694518342356815 1.03410909693479 0.9960484548465074 0.9658401782389784 1.1247728444613672 1.0 13.304001787554114 -8.525067332770151 24.89450141526123 0.9837150426549882 1.0069276916127967 0.0 0.06499565784457412 171.0958443254403 1946138.8395123368 0.007630132690920991 0.008684213152432872 2.984919802768277e-09 8.525067332770151 0.0232126489578085 GAAATTT(ph)TTEHR ddPTM_A549_MK2206_60min_R1 2 GAAATTTTTEHR 12 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 GAAAT(0.036)T(0.231)T(0.608)T(0.106)T(0.019)EHR;GAAAT(0.008)T(0.106)T(0.763)T(0.106)T(0.016)EHR 62.891000000000005 0.0065241 3109100.0 488.03999999999996 589.19 526.3 425.34000000000003 243.41 326.38 476.42 564.45 547.29 695.46 839.89 True False 570.4092205675837 619.1772543660369 600.9372539137888 529.5483190942382 207.60471144327718 360.91731496649027 562.9793471196325 644.4625160556269 423.329688842542 538.355102982053 631.3221332152356 0.9035153221423888 0.9807627862065496 0.9518710374580077 0.8387925770910684 0.32884117397559837 0.5716848752448908 0.8917465704116173 1.020814069631092 0.6705446658215243 0.8527423238597475 1.0 9.302232520505148 -11.027633493732122 1.2757390328187672 1.0017472924135657 0.7819014578752259 0.04030437019622313 0.1991819911819881 0.8116898545491137 2.3219821957220343 0.15664324424946452 0.034066417410680915 9.383535605851461e-12 11.027633493732122 -0.21984583453833983 GAADEVEVEPPEPPGPVAS(ph)R ddPTM_A549_MK2206_60min_R1 2 GAADEVEVEPPEPPGPVASR 20 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 GAADEVEVEPPEPPGPVAS(1)R;GAADEVEVEPPEPPGPVAS(1)R 101.96 1.7112e-09 2133900.0 906.63 842.38 553.8499999999999 527.9 836.4100000000001 834.6 459.98 876.3299999999999 1337.78 746.87 882.9200000000001 True False 1059.6469790246465 885.2535439041096 632.3942581800341 657.2355236983316 713.375196985627 922.9168180373576 543.5524119224395 1000.5524611480698 1034.7749659956803 578.1515482762571 663.6665966476515 1.5966555863700123 1.3338829291330165 0.9528794448514027 0.9903097835844007 1.0748999581854295 1.3906332226139522 0.819014268110013 1.507613109055231 1.5591789178822488 0.8711475780107774 1.0 9.374314852790269 GAADEVEVEPPEPPGPVAS(ph)R ddPTM_A549_PD325901_60min_R1 1 GAADEVEVEPPEPPGPVASR 20 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 GAADEVEVEPPEPPGPVAS(1)R 89.866 4.1139e-06 1142400.0 331.25 352.76 328.91 418.31 604.68 441.3 432.22 364.52 178.48 256.59 538.02 True False 364.87825614663853 382.4883232113276 351.2318104965038 444.1480586490613 562.2093628327536 437.7061991125486 448.66836861985917 357.24936263959205 170.97910628091893 240.3888636100767 471.84695078978245 0.7732978999565461 0.810619465848226 0.7443765608924848 0.9412968715928789 1.191507885961161 0.9276444372055627 0.9508769058883887 0.757129747350543 0.3623613673771385 0.5094636369011419 1.0 8.882175169821958 -8.394285749184718 5.297365125960673 0.6925768552768697 0.9081623832433214 0.292100737673496 0.18492924875962738 0.3594859738921845 14.150784511614582 0.041900037843425136 0.05069912885946389 4.033798970656727e-09 8.394285749184718 0.2155855279664517 GAAEEAELEDS(ph)DDEEKPVK ddPTM_A549_MK2206_60min_R1 1 GAAEEAELEDSDDEEKPVK 19 1 Q9UBB9;F6XM96 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 GAAEEAELEDS(1)DDEEKPVK 157.73 4.575399999999999e-27 11913000.0 4109.1 4762.9 4178.3 3463.8 5603.8 5622.1 4104.7 4385.3 6548.9 6333.2 6167.1 True False 4802.6156221503525 5005.31126600926 4770.845768626232 4312.43115549589 4779.488443308974 6217.026890352058 4850.4708579026 5006.929704418005 5065.584606444342 4902.525721401574 4635.638866698827 1.0360202250979993 1.0797457286774559 1.0291668324076526 0.9302776336774693 1.0310312301597786 1.341137018893662 1.046343556385953 1.080094858205291 1.0927478934638608 1.0575728313566422 1.0 12.178552464139283 -5.166130206638944 16.623482519894416 1.0584515765400293 1.0359846844287823 0.0 0.09705254657903814 27714.01305615934 4810383.916916966 0.01337179084582941 112.63136138829911 6.821341515683206e-06 5.166130206638944 -0.022466892111246972 GAAEEAELEDS(ph)DDEEKPVKQDDFPK ddPTM_A549_MK2206_60min_R1 4 GAAEEAELEDSDDEEKPVKQDDFPK 25 2 Q9UBB9;F6XM96 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK 241.05 8.027199999999999e-112 249349000.0 11358.0 13338.599999999999 11710.800000000001 10829.949999999999 15376.1 13178.2 12229.9 13470.199999999999 19272.0 17568.4 17603.4 True False 13274.952723560815 14017.477766232994 13371.567533979865 13483.288236174933 13114.296058596503 14572.70837701881 14451.914523610247 15379.642100757388 14906.92277106007 13599.68623821629 13231.989950875804 1.00324688673771 1.059362788082015 1.0105484952469166 1.0189917228045124 0.9911053520508825 1.1013240208857826 1.092195095164329 1.162307571110227 1.1265820807302989 1.0277884345971824 1.0 13.691742423507192 -7.26230216822742 24.998795415734598 1.0750095871187786 1.018814929987205 0.3569397779785092 0.04456599505373533 105.3369630972092 3052084.555439779 0.008726074892074874 0.014437732343710848 5.466354990334986e-08 7.26230216822742 -0.05619465713157368 GAAEEAELEDS(ph)DDEEKPVKQDDFPK ddPTM_A549_PD325901_60min_R1 5 GAAEEAELEDSDDEEKPVKQDDFPK 25 2 Q9UBB9;F6XM96 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK 269.45 2.0607999999999994e-138 603265000.0 20093.600000000002 21188.0 20441.8 20466.299999999996 25959.8 21514.8 21188.6 22886.699999999997 23136.9 22680.6 22588.6 True False 22133.48747987349 22973.58711929247 21829.103474529293 21730.456868660265 24136.473204448186 21339.5906020092 21994.94376784681 22430.206814231165 22164.536553737078 21248.543045304577 19810.34540093319 1.1172691354907351 1.1596762527023012 1.1019042340120433 1.096924683990448 1.218377202212295 1.0771942724938037 1.1102756323880507 1.132247134528738 1.1188364516195155 1.0725983124102236 1.0 14.273966413934815 -10.677736840976431 0.5113110111400794 0.9748356322041859 1.1307006565231847 0.36500312044874395 0.041370772396263494 0.6892357051452569 0.24770439643095038 0.05280921806690252 0.008186735233224282 2.1002121133565482e-11 10.677736840976431 0.15586502431899885 GAAEEAELEDS(ph)DDEEKPVKQDDFPKDFGPR ddPTM_A549_MK2206_60min_R1 2 GAAEEAELEDSDDEEKPVKQDDFPKDFGPR 30 3 Q9UBB9;F6XM96 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 GAAEEAELEDS(1)DDEEKPVKQDDFPKDFGPR;GAAEEAELEDS(1)DDEEKPVKQDDFPKDFGPR 161.55 7.566899999999999e-47 17359100.0 1715.12 2489.4 2720.5 2371.1000000000004 3294.8999999999996 2039.6100000000001 1766.42 2253.1 4335.3 3804.9 3707.4 True False 2004.5903253419276 2616.0998269129022 3106.307807851918 2952.0196064427255 2810.2245747276384 2255.440176416455 2087.3556490891688 2572.483824829361 3353.361472051513 2945.370447382186 2786.7502609653216 0.7193290168195925 0.9387636429274769 1.1146703209694515 1.0593054023506776 1.0084235441155698 0.8093442056896686 0.7490286009217472 0.9231124370428014 1.203323282686235 1.0569194120616745 1.0 11.44436800349754 -8.734733475702615 23.79833134378396 1.0960137539607533 0.9215154657318262 0.2727012411216887 0.1241786673331984 135.5312685321815 120775.07661740309 0.023975338631949724 0.02718050686732881 1.841902020518588e-09 8.734733475702615 -0.1744982882289271 GAAEEAELEDS(ph)DDEEKPVKQDDFPKDFGPR ddPTM_A549_PD325901_60min_R1 2 GAAEEAELEDSDDEEKPVKQDDFPKDFGPR 30 3 Q9UBB9;F6XM96 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 GAAEEAELEDS(1)DDEEKPVKQDDFPKDFGPR;GAAEEAELEDS(1)DDEEKPVKQDDFPKDFGPR 210.9 1.0518e-90 92636000.0 7840.8 7170.2 7879.0 7725.5 8007.799999999999 12075.5 9379.900000000001 9467.8 8470.6 10460.5 9430.6 True False 8636.792243908118 7774.457917819088 8413.716320275922 8202.68658911649 7445.359753410271 11977.161131619268 9736.857227378228 9278.957301654582 8114.610139304972 9800.022244799906 8270.695985498905 1.0442642625301537 0.9400004463288366 1.0172924183197853 0.9917770648925246 0.9002095792741379 1.448144285876176 1.177271809343489 1.1219076747499208 0.9811278462577273 1.1849090163611846 1.0 13.013793023076646 -4.858832012026143 16.78727281061667 1.031681530172763 3.9926891039805263 0.0 0.15294273383985726 3075.7125994097555 369990.57534136047 0.020062699021850955 4058.584303410877 1.384101655102297e-05 4.858832012026143 2.9610075738077635 GAAGENTS(ph)VSAGEEKKEER ddPTM_A549_MK2206_60min_R1 1 GAAGENTSVSAGEEKKEER 19 2 Q86VY4 Q86VY4 TSPYL5 Testis-specific Y-encoded-like protein 5 1 GAAGENT(0.025)S(0.559)VS(0.416)AGEEKKEER 78.324 6.9775e-05 6738900.0 884.08 1187.6 1418.5 1445.9 1431.4 1074.2 1128.8 960.29 1784.1 1756.0 1786.7 True False 1033.291090319215 1248.043767350269 1619.664629824644 1800.145564908918 1220.8429561641137 1187.8711310037497 1333.888348576132 1096.414048264786 1380.0041986222645 1359.3183804050343 1343.0130795885902 0.7693827454277263 0.9292863832216635 1.2059931913103938 1.3403782824366555 0.9090328119053752 0.8844821759797263 0.9932057765101935 0.8163837455705601 1.0275433795812368 1.012140835457417 1.0 10.3912576398859 -5.517267093941341 24.649437324338614 1.016499533775209 0.8093585517238578 0.21808138006130906 0.13895164674132238 209.14464782058488 918662.2234100035 0.019311135124500965 0.08010508251579561 3.0390154364990186e-06 5.517267093941341 -0.20714098205135112 GAAGRPLELS(ph)DFR ddPTM_A549_MK2206_60min_R1 1 GAAGRPLELSDFR 13 1 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GAAGRPLELS(1)DFR 70.197 0.00081086 7414500.0 814.2 896.11 790.53 885.59 1374.0 1053.4 935.75 801.73 1591.9 1062.6 1237.2 True False 951.617054721184 941.718171404724 902.6390411105226 1102.5595897556454 1171.8864201267936 1164.8700888096716 1105.7636624558088 915.3776826951514 1231.3371917419329 822.5579219922494 929.9690950170727 1.0232781495859429 1.0126338353076514 0.970611868659949 1.1855873444218104 1.2601348006142932 1.2525901076188843 1.1890326983774755 0.98430978792725 1.3240624858822083 0.8845002768367787 1.0 9.861038962762647 -6.263671568664748 24.68779302907569 1.1631099365290427 1.0032205347716474 0.15013291077520574 0.12871935935681741 186.20270679708227 2059402.322340863 0.01808282096994951 0.04395936277323442 5.449145838656738e-07 6.263671568664748 -0.1598894017573953 GAAGRPLELS(ph)DFR ddPTM_A549_PD325901_60min_R1 2 GAAGRPLELSDFR 13 1 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GAAGRPLELS(1)DFR;GAAGRPLELS(1)DFR 79.652 0.00020785 21756000.0 2302.4 2457.1 2539.7 2975.1 3117.6 2905.0 2631.6 3382.2 3698.8 2631.9 2788.8999999999996 True False 2536.137953062705 2664.1684401932016 2712.0593144567547 3158.865170057663 2898.6305311361266 2881.3426431496796 2731.7469780667752 3314.7393677154278 3543.3522989234802 2465.7213848371366 2445.8829802937134 1.036900773052582 1.089246076634981 1.1088262751356475 1.291502985019476 1.1851059737894922 1.1780378155310087 1.11687558238732 1.3552321981149638 1.4487006645338272 1.0081109377281168 1.0 11.256139666537017 -6.0799063761316265 5.003400885019885 1.2194136761810817 1.070244308854599 0.13487623407739557 0.12934089625582051 0.3493275656094638 15.34554356203018 0.023217333235928977 0.06463952927803089 8.319430995064998e-07 6.0799063761316265 -0.14916936732648267 GAAGWS(ph)PSSSGNPMAKPESR ddPTM_A549_MK2206_60min_R1 1 GAAGWSPSSSGNPMAKPESR 20 1 Q8WY91 Q8WY91 THAP4 THAP domain-containing protein 4 1 GAAGWS(0.407)PS(0.197)S(0.197)S(0.197)GNPMAKPES(0.001)R 44.5 0.009967299999999998 4349400.0 972.04 1175.8 1066.8 823.88 1541.7 1214.5 998.44 1036.8 1768.8 1668.8 1643.6 True False 1136.0965879036844 1235.6431977521447 1218.0882813513779 1025.730636985378 1314.91797227764 1343.017583880146 1179.8436239833043 1183.7695750668338 1368.1696241931843 1291.8169209680652 1235.4487589476732 0.9195821191899414 1.0001573831395785 0.9859480391472629 0.8302494373453996 1.0643241678413735 1.0870686251885489 0.9549919536835084 0.9581697067510444 1.1074272520687622 1.0456256575694851 1.0 10.27081945984104 -6.8127720107617975 24.999970358359516 1.0409151208579335 0.9424212734871373 0.3577616717134323 0.061318917773504227 90.21393696144797 43935.60080072224 0.009724254369689924 0.018377133177536448 1.5389623290566638e-07 6.8127720107617975 -0.09849384737079614 GAAGWSPS(ph)SSGNPMAKPESR ddPTM_A549_PD325901_60min_R1 1 GAAGWSPSSSGNPMAKPESR 20 1 Q8WY91 Q8WY91 THAP4 THAP domain-containing protein 4 1 GAAGWS(0.1)PS(0.3)S(0.3)S(0.3)GNPMAKPESR 54.368 0.0021053 5867400.0 1454.9 1425.9 1066.2 1451.5 1536.0 1663.3 1238.9 1288.0 1742.6 1695.3 1971.7 True False 1602.6003769592287 1546.0655971964861 1138.5587435814432 1541.1558584043216 1428.1166589123334 1649.7546362653584 1286.0470174520933 1262.3098295835475 1669.3645820547358 1588.2584686782911 1729.1933996360992 0.9267907090649828 0.8940964021270544 0.658433431344954 0.8912570790107404 0.8258860224731797 0.9540602205702043 0.7437265361542185 0.7299992180453585 0.9654007367863224 0.9184967216579318 1.0 10.755883519224803 -8.886062490648237 7.504695840568636 0.9847913995995277 0.8281845601465047 0.307713822872981 0.08747403656571834 0.16107747503128425 10.049295461607556 0.014570361816356443 0.015470052922662236 1.2999825100460253e-09 8.886062490648237 -0.156606839453023 GAAGWSPSS(ph)SGNPMAKPESR ddPTM_A549_PD325901_60min_R1 1 GAAGWSPSSSGNPMAKPESR 20 1 Q8WY91 Q8WY91 THAP4 THAP domain-containing protein 4 1 GAAGWS(0.185)PS(0.265)S(0.275)S(0.275)GNPMAKPESR 56.29 0.0015749 5808800.0 1443.1 1234.3 1053.0 1249.5 1641.3 1787.0 1169.5 1172.1 1496.4 1847.0 1977.8 True False 1589.60244964593 1338.3187927762262 1124.4629122033946 1326.6787771796085 1526.020750177613 1772.4472644779619 1214.0059624749563 1148.7215460053383 1433.5115118711733 1730.380104789009 1734.5431383071846 0.9164386947431538 0.7715684685030949 0.6482761295293045 0.7648577587262382 0.8797825297483939 1.0218525128223501 0.6998995502987357 0.6622617337303154 0.8264490402182785 0.9975999250602448 1.0 10.760340005740657 -10.231944901274268 0.8359940099816878 0.991792322343597 0.7963693155768685 0.33655359428015663 0.10681989870637855 0.5357372233880041 0.7266226130341797 0.05719464498111877 0.02199335478905229 5.862125322899387e-11 10.231944901274268 -0.19542300676672852 GAALDLS(ph)PLHR ddPTM_A549_MK2206_60min_R1 2 GAALDLSPLHR 11 0 J3KQI6;Q9BX79-3;Q9BX79;Q9BX79-6;Q9BX79-5;Q9BX79-4 J3KQI6 STRA6 Stimulated by retinoic acid gene 6 protein homolog 1 GAALDLS(1)PLHR;GAALDLS(1)PLHR 99.73200000000001 8.377100000000001e-05 7434900.0 686.5799999999999 822.2 1019.73 816.88 1202.6599999999999 891.45 869.91 762.15 1367.69 1244.1100000000001 1205.33 True False 802.4579187306201 864.046468099858 1164.3430475650932 1017.0156366711371 1025.7503071540687 985.7826473033815 1027.9613867025723 870.1870964864842 1057.9103987521353 963.0646869280797 906.0132955843261 0.8857021443742514 0.9536796781139929 1.285127992315123 1.122517342325778 1.1321581174948643 1.0880443500198402 1.1345985668340515 0.9604573141780043 1.1676543864291133 1.0629697065394155 1.0 9.823388411495275 -5.540596978006116 24.914164454704075 1.0945657128584578 0.9026964029746966 0.4387565370764607 0.08185931706242372 144.46150396122218 203131.8809616656 0.012097146401324472 0.04687007270457747 2.880069858045668e-06 5.540596978006116 -0.19186930988376127 GAALDLS(ph)PLHR ddPTM_A549_PD325901_60min_R1 2 GAALDLSPLHR 11 0 J3KQI6;Q9BX79-3;Q9BX79;Q9BX79-6;Q9BX79-5;Q9BX79-4 J3KQI6 STRA6 Stimulated by retinoic acid gene 6 protein homolog 1 GAALDLS(1)PLHR;GAALDLS(1)PLHR 110.31 2.6433000000000003e-05 12532900.0 1121.19 1092.57 1310.47 1008.11 1255.06 1184.02 1233.88 1278.24 1368.54 1285.1 1758.53 True False 1235.0123834235453 1184.644708274748 1399.406374696279 1070.3786651160742 1166.908915321949 1174.3777336805801 1280.8359786050435 1252.7445004401193 1311.0250230260476 1203.958566683462 1542.2419582401317 0.8007902889847652 0.7681315515670176 0.907384452367744 0.6940406849892052 0.7566315448021664 0.7614743765762116 0.8305026145616079 0.8122879122479841 0.8500773928638745 0.7806547865273434 1.0 10.590813408260834 -9.946419060164876 0.49679383913313313 1.0106843385295907 0.7813876053179699 0.0 0.08062099272697126 0.40225379552129287 0.19440565412836913 0.04062246483992511 0.013815978092059122 1.1313082125694378e-10 9.946419060164876 -0.2292967332116208 GAANASGSS(ph)PDAPAKDAR ddPTM_A549_MK2206_60min_R1 2 GAANASGSSPDAPAKDAR 18 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 GAANAS(0.036)GS(0.183)S(0.781)PDAPAKDAR;GAANAS(0.031)GS(0.156)S(0.813)PDAPAKDAR 90.22 1.6602e-06 13237900.0 2269.7 2439.5 2513.0 1824.88 2762.5 1715.5700000000002 1838.0900000000001 2197.4 3119.1 2713.4 2976.5 True False 2652.7698711627036 2563.6601300530324 2869.3811876977993 2271.9756819219765 2356.139909461623 1897.1104786968006 2172.047160377661 2508.888179255266 2412.6288301791974 2100.441055461857 2237.3529027791133 1.1856734214202789 1.1458452204248148 1.2824893132118838 1.0154748851197577 1.0530926554031594 0.8479263491871655 0.9708111570953634 1.1213645268651482 1.0783407602718222 0.9388063245868848 1.0 11.127577118588858 -6.277532302828048 24.49821141308313 1.0255238713058374 1.1987869068169226 0.5631168267139093 0.07717908535102032 365.18987744975385 555927.369881221 0.010804552352647677 0.0251851096915054 5.277979477047501e-07 6.277532302828048 0.17326303551108513 GAAPEGDSAALAEES(ph)PPAPSSR ddPTM_A549_MK2206_60min_R1 1 GAAPEGDSAALAEESPPAPSSR 22 0 Q96JH8-1;Q96JH8;Q96JH8-3;Q96JH8-2 Q96JH8-1 RADIL Ras-associating and dilute domain-containing protein 1 GAAPEGDS(0.009)AALAEES(0.974)PPAPS(0.009)S(0.009)R 70.09100000000001 7.204400000000001e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GAAPPDS(ph)PVVYSDR ddPTM_A549_MK2206_60min_R1 2 GAAPPDSPVVYSDR 14 0 B4DEY6;Q9NZU5-2;Q9NZU5 B4DEY6 LMCD1 LIM and cysteine-rich domains protein 1 1 GAAPPDS(0.999)PVVYS(0.001)DR;GAAPPDS(0.984)PVVYS(0.016)DR 131.35 8.8179e-09 20737000.0 2985.2 4143.8 3064.3 4112.1 4300.700000000001 3464.8 3044.6 2762.1 4013.8 4161.1 5245.7 True False 3489.0287788672076 4354.7017203991645 3498.8638175337737 5119.564684599185 3668.072727102839 3831.4428362519006 3597.764410059261 3153.636133576488 3104.6807087215116 3221.1046199905404 3943.0479160451478 0.8848557900271934 1.1043998990422879 0.887350063207731 1.2983774972062923 0.9302632900241022 0.971695733308464 0.9124323332260684 0.7997965535096935 0.7873809232923263 0.8169072982560375 1.0 11.945095526890897 -7.408083195439684 2.0104517214568833 0.8894935689510944 1.036240365600998 0.2685648272548957 0.12220047930180084 0.39617323006625343 3.144652090973475 0.019969092341346494 0.03459073732389427 3.907660316915406e-08 7.408083195439684 0.14674679664990353 GAAPPDS(ph)PVVYSDR ddPTM_A549_PD325901_60min_R1 1 GAAPPDSPVVYSDR 14 0 B4DEY6;Q9NZU5-2;Q9NZU5 B4DEY6 LMCD1 LIM and cysteine-rich domains protein 1 1 GAAPPDS(0.977)PVVYS(0.023)DR 69.729 0.0026826999999999997 10306000.0 3871.1 4410.9 4016.4 4769.1 4775.5 4119.8 4151.2 4225.6 4286.4 5187.4 4738.6 True False 4264.091222246797 4782.622023054897 4288.977056575226 5063.676475588052 4440.085354580632 4086.2497147153367 4309.176187623799 4141.317093080927 4106.257514357526 4859.866678712779 4155.782240460324 1.0260622370277217 1.15083556989385 1.0320504801281765 1.2184653051087593 1.0684114560556996 0.9832684867200151 1.036910968450186 0.996519272054593 0.9880829352364449 1.1694228420819435 1.0 12.020904344862169 -7.10343658050428 4.700512544580481 0.9975360581220402 1.1087023765656019 0.12595159678900836 0.07272020534194838 0.12630139510023486 4.511428704584212 0.006710674303505945 0.011884520315503168 7.880675035896062e-08 7.10343658050428 0.11116631844356173 GAAPT(ph)PPGK ddPTM_A549_MK2206_60min_R1 2 GAAPTPPGK 9 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GAAPT(1)PPGK;GAAPT(1)PPGK 60.398 0.0085881 25766000.0 3762.2 4062.0 4021.7 3460.0 4806.0 3490.1000000000004 2977.05 3281.8999999999996 5092.0 5872.700000000001 6009.8 True False 4397.16738304107 4268.738449795212 4592.037533849678 4307.700155325303 4099.043766469704 3859.420065459121 3517.941449440623 3747.119375397223 3938.6701302531064 4546.0529912327165 4517.400797957972 0.9733843817951129 0.9449545525658992 1.0165220531074959 0.9535793585710922 0.9073898796676663 0.8543452835098709 0.7787534484500156 0.8294857027277845 0.8718885718605105 1.0063426281076713 1.0 12.14127720454211 -6.639940626296416 4.161064338895578 0.9090075581716006 0.9763000639389431 0.23280511511664204 0.06611516644429773 0.36495657639086665 11.402365001840867 0.011445964480611375 0.024581228657515004 2.2911808655778008e-07 6.639940626296416 0.06729250576734247 GAAQENGAPECS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GAAQENGAPECSPR 14 0 Q6IE81-2;Q6IE81;Q6IE81-3 Q6IE81-2 JADE1 Protein Jade-1 1 GAAQENGAPECS(1)PR 62.378 0.0061066 3555200.0 841.82 834.59 1187.0 694.04 986.02 853.46 678.02 812.86 588.33 999.64 1090.7 True False 927.28094668487 904.9238282938592 1267.5569580108534 736.9092745207963 916.7653567843348 846.509704723761 703.8224221267799 796.6468696236665 563.6045360726862 936.5225598003705 956.5508145169612 0.9694006137594772 0.9460279731723688 1.32513290331674 0.7703817333456776 0.9584073766611999 0.8849605184343827 0.7357919845399912 0.8328327753564844 0.5892050140141223 0.979062006521102 1.0 9.901697800169828 -6.305061583202619 24.99311517941618 0.8136572308164662 1.0667716287119366 0.3243422866000524 0.14697314858244795 408.9619000380239 234311.9547463744 0.02427401398963901 0.056408001377474995 4.953799406690093e-07 6.305061583202619 0.2531143978954704 GAAS(ph)PGPSR ddPTM_A549_MK2206_60min_R1 1 GAASPGPSR 9 0 M0QZR4;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 GAAS(0.992)PGPS(0.008)R 101.38 0.000736 42484000.0 1612.6 1411.4 1337.5 944.84 1795.8 1014.3 926.13 1825.4 1516.8 1970.9 2293.7 True False 1884.7674557152823 1483.234231423181 1527.177611836772 1176.3258424154797 1531.6401988818743 1121.6325527621518 1094.395832979105 2084.156040053045 1173.2472218318762 1525.6723211505016 1724.110987100437 1.093182207999865 0.8602892983807522 0.8857768573269972 0.682279650913769 0.8883651982624072 0.6505570471704278 0.6347595028204247 1.2088293941900587 0.6804940230704124 0.8849037750848836 1.0 10.751636933442654 -5.175545080037083 2.443348514941466 0.8362342272222093 1.190235176372665 0.16792416608505445 0.16413368411924495 1.1713809392926582 6.87207737292947 0.023810504801735702 0.9431628906663181 6.675056098710603e-06 5.175545080037083 0.35400094915045577 GAAS(ph)PGPSR ddPTM_A549_PD325901_60min_R1 2 GAASPGPSR 9 0 M0QZR4;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 GAAS(1)PGPSR;GAAS(0.999)PGPS(0.001)R 104.39 0.00061143 107285000.0 3296.1 2914.1000000000004 3057.7 2896.0 3205.6 2850.4 3095.7 2583.36 2916.77 3221.4 3764.2000000000003 True False 3630.7176455394265 3159.681434034839 3265.213909443797 3074.879342706799 2980.449714719645 2827.1872874471087 3213.5085575320386 2531.8328581932865 2794.1883002409027 3018.000254232437 3301.2272632298022 1.0998084518383817 0.9571232702542024 0.9890909195537265 0.9314352201545941 0.902830819288606 0.8564049252038135 0.9734284559337054 0.7669368559970731 0.8464089495938456 0.9142055404206658 1.0 11.688786744715623 -3.8786030850755178 0.7623868848158256 0.911381350449336 2.405846492374782 0.45754687119221693 0.06274178623829467 15.338528702048702 1.2240323796279189 0.011907381599562627 31.554332457318083 0.00013225037584052116 3.8786030850755178 1.4944651419254462 GAAS(ph)PVLQEDHCDSLPSVLQVEEK ddPTM_A549_PD325901_60min_R1 2 GAASPVLQEDHCDSLPSVLQVEEK 24 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 GAAS(1)PVLQEDHCDSLPSVLQVEEK;GAAS(1)PVLQEDHCDSLPSVLQVEEK 157.16 5.663099999999999e-34 6384900.0 2206.7 2778.5 2281.3 2519.2 3084.9 2581.1000000000004 2828.3999999999996 2827.8 2842.0 2855.5 3050.7 True False 2430.722559513321 3012.653946146597 2436.122736571325 2674.8052624816883 2868.2272663272524 2560.080377360977 2936.036309759869 2771.3973106338144 2722.5606233212216 2675.2032426773208 2675.483239980648 0.9085172066078435 1.1260223578034403 0.9105355997628846 0.9997465962451836 1.0720408274162834 0.9568665350262087 1.0973854240182441 1.0358492511632629 1.017595843112407 0.9998953470165154 1.0 11.385583776160683 -6.5325459607091565 24.725869418285804 1.0178711080037672 0.9892941617320454 0.07368987340349153 0.06422026296401974 480.91313402612315 1230031.611237788 0.008210781731709697 0.017109844083243266 2.9339589912116014e-07 6.5325459607091565 -0.028576946271721804 GAAS(ph)QARGSDSEDGEFEIQAEDDAR ddPTM_A549_MK2206_60min_R1 1 GAASQARGSDSEDGEFEIQAEDDAR 25 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 GAAS(0.639)QARGS(0.342)DS(0.02)EDGEFEIQAEDDAR 93.04299999999999 4.959e-09 3995900.0 1237.4 1094.0 1264.2 702.26 1553.1 1164.9 1166.5 1267.9 1483.2 1525.7 1780.1 True False 1446.2428684745694 1149.6799271481943 1443.4825696329322 874.3137315256491 1324.6410473791293 1288.168944801962 1378.437950579428 1447.628707780902 1147.2575681837025 1181.0433103553307 1338.0520417393234 1.0808569647220967 0.85921914192047 1.0787940413412922 0.6534228148474222 0.9899772251438284 0.9627196137509578 1.03018261441282 1.0818926787773822 0.8574087796259339 0.8826587259043391 1.0 10.385918513421093 GAASPGPS(ph)R ddPTM_A549_MK2206_60min_R1 1 GAASPGPSR 9 0 M0QZR4;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 GAAS(0.494)PGPS(0.506)R 52.683 0.023437 43409000.0 933.94 953.39 742.55 493.68 908.18 776.72 682.03 927.41 1068.0 1133.8 1050.8 True False 1091.5662393592518 1001.913478742062 847.8547556406688 614.631622162137 774.5879250587708 858.9119948549924 805.9460226606842 1058.8732075740081 826.0997052455463 877.6737925417017 789.8573593953604 1.3819789438878571 1.2684739425724052 1.0734276835626444 0.7781552135345557 0.9806681115837441 1.0874267165308096 1.0203690743321552 1.3405878858742049 1.0458846719842296 1.11118011638654 1.0 9.625448329807014 -5.6905109204217785 3.2327982340549575 1.0303638925894014 1.358018192068394 0.4246359008607894 0.1260675781669021 0.16027796819012188 3.239458370177066 0.017279306464817294 0.08139404744718526 2.0393373794168104e-06 5.6905109204217785 0.3276542994789926 GAASQARGS(ph)DS(ph)EDGEFEIQAEDDAR ddPTM_A549_MK2206_60min_R1 2 GAASQARGSDSEDGEFEIQAEDDAR 25 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 2 GAAS(0.161)QARGS(0.843)DS(0.996)EDGEFEIQAEDDAR;GAAS(0.142)QARGS(0.874)DS(0.985)EDGEFEIQAEDDAR 66.87899999999999 5.8201e-05 4855700.0 1270.5900000000001 1015.6500000000001 978.0 977.23 1326.92 1018.4100000000001 842.3799999999999 1014.36 1704.63 1300.12 1446.86 True False 1485.0345290569758 1067.3422468081017 1116.695106075785 1216.6513938695211 1131.7318257602954 1126.1774702341545 995.4295420566638 1158.1486363472159 1318.5340267347513 1006.4219890274452 1087.5647306954427 1.3654677162134259 0.9814057192950624 1.0267849577668033 1.1186933150098883 1.0406110034817055 1.0355038541145234 0.9152830300226239 1.0649008777681108 1.2123729186138792 0.9253904256198978 1.0 10.086885555852525 -5.250325725471546 24.736331831017253 1.0714693416747674 1.3654679137339403 0.500610007291772 0.08807128311184347 1057.8120598923472 2354385.8321430353 0.01322221849619441 0.27801474746975474 5.619197213505369e-06 5.250325725471546 0.2939985720591729 GAASQARGS(ph)DS(ph)EDGEFEIQAEDDAR ddPTM_A549_PD325901_60min_R1 2 GAASQARGSDSEDGEFEIQAEDDAR 25 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 2 GAASQARGS(1)DS(1)EDGEFEIQAEDDAR;GAASQARGS(1)DS(1)EDGEFEIQAEDDAR 198.48 1.9595999999999994e-68 32605000.0 3818.8 4296.299999999999 4667.799999999999 4686.0 5287.6 4842.6 3876.6 4416.9 4497.4 5375.1 5039.7 True False 4206.481764748027 4658.364278866158 4984.584977761637 4975.443577321843 4916.217217229722 4803.163471158911 4024.126134356916 4328.80146450898 4308.389918129789 5035.7152686796935 4419.848849290481 0.9517252530984841 1.0539646122997999 1.1277727243006994 1.1257044634276467 1.1123043762048388 1.0867257308878253 0.9104669122345461 0.9794003397206407 0.9747821848752625 1.1393410590246944 1.0 12.109781317602842 -7.733758044979468 24.97207703187668 0.9817063937195483 1.0815608463511561 0.20412365786778763 0.0694043157279828 144.69255100577678 130530.73316491403 0.007889204813841368 0.011700124882084812 1.8460436042887966e-08 7.733758044979468 0.09985445263160786 GAASTLVPGVSETSAS(ph)PGSPSVR ddPTM_A549_PD325901_60min_R1 2 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVSET(0.007)S(0.055)AS(0.633)PGS(0.306)PSVR;GAASTLVPGVSET(0.009)S(0.04)AS(0.631)PGS(0.319)PS(0.001)VR 253.99 3.368199999999999e-110 37610000.0 3094.0 3398.2 4046.9 3001.0 4076.8 4639.5 4333.1 4267.4 4947.0 4689.6 4862.5 True False 3408.1006023175833 3684.578239983939 4321.546969986627 3186.364954234497 3790.459632196486 4601.717450221325 4497.998491663298 4182.283359289464 4739.094793655908 4393.497855667856 4264.443325927132 0.799190032986692 0.8640232636185582 1.0133906443807834 0.7471936453843597 0.8888521531406219 1.07908983623809 1.0547680313433148 0.9807337182468463 1.1113044379891206 1.0302629252817346 1.0 12.058141711237191 -7.204448089502638 5.654128271326544 1.0496235243055376 0.8629456772411161 0.6266108200808493 0.06925243226125867 0.11270798311695082 7.857284053882954 0.010561046054534392 0.018355921056723273 6.245279946122092e-08 7.204448089502638 -0.18667784706442148 GACS(ph)TPDMPQFEPVK ddPTM_A549_MK2206_60min_R1 1 GACSTPDMPQFEPVK 15 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GACS(0.579)T(0.421)PDMPQFEPVK 110.38 9.8145e-07 4411400.0 1586.9 2025.1 1422.0 1357.9 2585.1 2157.2 2255.7 2210.2 2710.6 2514.9 3197.5 True False 1854.7299240199561 2128.168940098543 1623.6609824537502 1690.585560958448 2204.835214461263 2385.47347216653 2665.531491746263 2523.502618453622 2096.6534279387415 1946.7823433260942 2403.4725034894036 0.7716875983924204 0.8854559130627997 0.6755479748973582 0.7033929277343619 0.9173540413964565 0.9925112389275341 1.1090334871218195 1.0499402904713728 0.8723434218177172 0.8099873580828245 1.0 11.230904583329744 -6.889244727187056 5.1607200845943 0.9645159991511102 0.7629892424138577 0.5504759974124056 0.09005609078168023 0.1288019872046353 5.36952825960534 0.013096548089570724 0.025166060180094093 1.2904918698408208e-07 6.889244727187056 -0.2015267567372525 GACST(ph)PDMPQFEPVK ddPTM_A549_MK2206_60min_R1 3 GACSTPDMPQFEPVK 15 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GACS(0.484)T(0.516)PDMPQFEPVK;GACS(0.2)T(0.8)PDMPQFEPVK;GACS(0.092)T(0.908)PDMPQFEPVK 141.46 2.0145e-13 22043600.0 6388.8 7998.3 6943.4 6076.200000000001 8780.4 7767.4 6655.9 8071.799999999999 9776.900000000001 9811.099999999999 10961.2 True False 7467.07324883653 8405.379306498538 7928.078527123325 7564.869272770988 7488.814791325544 8589.341112417173 7865.190874634903 9216.00236885076 7562.447760501105 7594.765695895122 8239.231526269921 0.9062827309838974 1.0201654462189675 0.9622351916978522 0.9181522874616643 0.9089215137902422 1.0424929903997677 0.9546024831997463 1.1185512070472239 0.9178583872038354 0.9217808325545911 1.0 13.008294068072905 -7.217218265075039 24.997947749519003 0.977948924044496 0.9471013782874376 0.11378568209444206 0.061245619443598937 1220.5516002254255 689971.3260089185 0.009148461182303199 0.01584552250108198 6.064314763522117e-08 7.217218265075039 -0.030847545757058392 GACST(ph)PDMPQFEPVK ddPTM_A549_PD325901_60min_R1 4 GACSTPDMPQFEPVK 15 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GACS(0.08)T(0.92)PDMPQFEPVK;GACS(0.197)T(0.803)PDMPQFEPVK;GACS(0.018)T(0.982)PDMPQFEPVK;GACS(0.021)T(0.979)PDMPQFEPVK 209.19 2.6473e-45 44912400.0 16866.0 17157.399999999998 17760.0 14258.8 16206.9 14372.199999999999 15023.6 16540.6 13983.6 15116.1 17907.4 True False 18578.223903907026 18603.314311900544 18965.300399555836 15139.533691915647 15068.583254769732 14255.157568287716 15595.33131922937 16210.684757150315 13395.917921278899 14161.666866270238 15704.903324361445 1.1829569097116623 1.184554525913132 1.2076037660248988 0.9640004385401854 0.9594827133634976 0.9076883361755634 0.993023070383241 1.0322053197235734 0.8529767834036363 0.9017353735825079 1.0 13.938927441680136 -6.290340667147061 5.543622136601359 0.9426117354404036 1.1917549023216378 0.8297353008693049 0.048392814639611544 0.06353277215112692 6.02448411665029 0.008645049453564056 0.02104027798895295 5.124592455227408e-07 6.290340667147061 0.24914316688123428 GACST(ph)PDMPQFEPVKTETMTVSSLAIR ddPTM_A549_PD325901_60min_R1 3 GACSTPDMPQFEPVKTETMTVSSLAIR 27 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GACS(0.145)T(0.855)PDMPQFEPVKTETMTVSSLAIR;GACS(0.135)T(0.864)PDMPQFEPVKTETMTVSSLAIR;GACS(0.135)T(0.861)PDMPQFEPVKT(0.001)ET(0.001)MT(0.001)VS(0.001)S(0.001)LAIR 85.866 1.6706e-07 16688200.0 3856.04 4135.54 4939.7 4503.89 4616.79 4641.8 5308.3 5229.700000000001 4980.799999999999 4086.5 5247.67 True False 4247.502342133386 4484.056469478891 5274.937746829162 4782.085056223662 4292.522597460856 4603.998719783885 5510.31026131322 5125.389530879715 4771.474297198572 3828.477692593547 4602.239857720935 0.9229206806784691 0.9743204631015104 1.1461674988494304 1.0390777543245622 0.9327029294788964 1.000382175227134 1.19731053392814 1.1136728396024642 1.0367721902181437 0.8318726991533725 1.0 12.168120459994391 GADAGSSGGTGPTEGYS(ph)PPAASTR ddPTM_A549_MK2206_60min_R1 2 GADAGSSGGTGPTEGYSPPAASTR 24 0 J3KT76;J3KSI9;Q969W3;Q969W3-2 J3KT76 FAM104A Protein FAM104A 1 GADAGSSGGTGPT(0.001)EGY(0.001)S(0.998)PPAASTR;GADAGSSGGTGPT(0.002)EGYS(0.998)PPAASTR 166.29 2.0707e-34 40275000.0 2258.74 2336.85 2318.45 1935.48 3097.3 2421.9300000000003 2339.2 2108.9 2904.5 3952.6 3326.1 True False 2639.960091108974 2455.7856835066327 2647.241072271376 2409.6726868869996 2641.691272968501 2678.2170250529794 2764.202360904758 2407.843033235383 2246.635387533416 3059.7049148000806 2500.137574309963 1.055925929131161 0.9822602198938707 1.0588381613367872 0.963816036224354 1.0566183637704845 1.071227860647695 1.105620102392836 0.9630842150356252 0.8986047050444761 1.223814619739299 1.0 11.287791768474989 -8.427809073481837 8.65444033874887 0.9510185054764675 1.0389556949410885 0.0 0.0928870864085297 0.2617751118568656 21.945005155973266 0.00838436536056173 0.01013409907571746 3.734142838043562e-09 8.427809073481837 0.08793718946462104 GADAGSSGGTGPTEGYS(ph)PPAASTR ddPTM_A549_PD325901_60min_R1 2 GADAGSSGGTGPTEGYSPPAASTR 24 0 J3KT76;J3KSI9;Q969W3;Q969W3-2 J3KT76 FAM104A Protein FAM104A 1 GADAGSSGGTGPT(0.019)EGYS(0.981)PPAASTR;GADAGSSGGTGPT(0.001)EGYS(0.999)PPAASTR 256.06 6.069799999999999e-111 40753000.0 4497.3 3944.2 4480.0 4117.5 5025.8 5064.3 5498.5 4955.200000000001 4896.5 5407.6 5596.3 True False 4953.862585262724 4276.591576171106 4784.0397404284995 4371.8286234790185 4672.805146068755 5023.058019863313 5707.7484263946535 4856.364648720801 4690.717133037427 5066.16321313321 4907.990577868591 1.009346392717415 0.8713528496683292 0.9747450946627694 0.8907573382868202 0.9520811158724818 1.0234449190904302 1.162950159711467 0.989481249336422 0.9557306719758374 1.0322275751664767 1.0 12.26091676404691 -7.076991886452834 5.929435224278649 0.997401350269888 0.9330651062525311 0.2619606924498227 0.06344210889856794 0.31280627893387597 18.837158575322068 0.009688017950850981 0.016998154829993794 8.375449291062766e-08 7.076991886452834 -0.06433624401735683 GADDAADADT(ph)AIINAEGGQNNSEEKK ddPTM_A549_PD325901_60min_R1 1 GADDAADADTAIINAEGGQNNSEEKK 26 1 A0A087X1W8;A0A0A0MTJ8;X5DQS5;Q9BY67-5;Q9BY67;Q9BY67-4;Q9BY67-3 A0A087X1W8 CADM1 Cell adhesion molecule 1 1 GADDAADADT(1)AIINAEGGQNNSEEKK 147.42 1.3074e-32 6504300.0 1668.4 2049.2 1602.3 1957.9 2018.1 2044.2 1676.4 2430.5 2481.3 2280.4 2619.1 True False 1837.7747397888352 2221.8932756680247 1711.04171341263 2078.8350362864785 1876.3556180670437 2027.5527129523507 1740.196319361278 2382.021770809635 2377.0195899531855 2136.415154824502 2296.967303842828 0.8000874617214779 0.967316022283293 0.7449133953931586 0.905034665843343 0.8168839038012858 0.8827085651416341 0.7576060470908437 1.0370290281557386 1.034851295434824 0.9301025535932871 1.0 11.165514605496544 -8.275792416250155 24.756676813834574 1.0184602652426145 0.8438656434580817 0.5686405404894994 0.0668298841625314 285.92039878462845 493165.61993294914 0.009004160906166361 0.01091152034476043 5.29916672540429e-09 8.275792416250155 -0.17459462178453278 GADFLVTEVENGGSLGSK ddPTM_A549_MK2206_60min_R1 2 GADFLVTEVENGGSLGSK 18 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 275.23 2.9302999999999995e-115 17357400.0 3289.0 2980.7 3897.8 3398.1 4934.1 3655.8 3319.3 3758.3 5745.1 5429.1 5529.7 False True 3844.1027916703233 3132.4048984009346 4450.566650779341 4230.634652546506 4208.300426162747 4042.654329476361 3922.373844284869 4291.0505343110335 4443.844023039499 4202.662539326295 4156.522878043895 0.9248361922837293 0.753611850652216 1.0707427292867029 1.0178302337499678 1.0124569380797488 0.9726048546083977 0.9436670889035936 1.0323654314469812 1.0691253611313745 1.0111005430828073 1.0 12.021161437006047 -5.768682267840602 24.99999784991258 1.022869719019863 0.8392240096422247 0.6328154493196201 0.05114639448434199 63.8023983268363 220227.69069097674 0.007102740961128847 0.02274829812133133 1.7034042722868434e-06 5.768682267840602 -0.18364570937763836 GADFLVTEVENGGSLGSK ddPTM_A549_PD325901_60min_R1 4 GADFLVTEVENGGSLGSK 18 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 314.17 1.3423999999999997e-152 31756900.0 7184.7300000000005 6670.16 7356.11 7302.8099999999995 9179.52 7161.87 7635.919999999999 7903.16 7516.83 8362.02 8428.82 False True 7914.118500481323 7232.277792128553 7855.339860482914 7753.887987815135 8534.782182824834 7103.54610523043 7926.50911413575 7745.525273890915 7200.923775580456 7834.040630128743 7392.128574692268 1.0706142920154478 0.9783755408271738 1.0626627744783146 1.048938463321835 1.1545770743280308 0.9609608428011074 1.0722904822398505 1.0478071634750157 0.9741339998107688 1.0597814352079058 1.0 12.851774135092697 -8.752685055109742 24.39542693991935 0.9877854998314307 1.0488828470628702 0.04746061824136816 0.052745548552135195 136.16208961794072 379437.82753019565 0.007701546387207744 0.008664388769172504 1.767318993567364e-09 8.752685055109742 0.06109734723143945 GADNDGS(ph)GS(ph)ESGYTTPK ddPTM_A549_MK2206_60min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.998)GS(0.84)ES(0.146)GY(0.012)T(0.003)TPK;GADNDGS(0.999)GS(0.938)ES(0.062)GYTTPK 121.27 8.9824e-10 16662400.0 2646.05 3373.6000000000004 2953.4 2462.1000000000004 3690.3999999999996 3760.7999999999997 2712.09 2935.9 4217.5 4602.8 4685.8 True False 3092.6385502886137 3545.301830189347 3372.2365299429703 3065.3146105278715 3147.5470486433187 4158.765359783003 3204.841647138417 3352.0728158166644 3262.242983963568 3563.024283216569 3522.186538499029 0.878045076967029 1.0065627675983817 0.9574270110577505 0.8702874129529061 0.8936343984735794 1.1807339884829753 0.909901168523616 0.9517022392701386 0.9261982431384127 1.0115944298438386 1.0 11.782255602417516 GADNDGS(ph)GSESGYT(ph)TPKK ddPTM_A549_MK2206_60min_R1 1 GADNDGSGSESGYTTPKK 18 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.78)GS(0.177)ES(0.046)GY(0.011)T(0.571)T(0.415)PKK 65.90100000000001 0.00089795 6153200.0 2583.0 2408.8 2079.4 2121.5 3098.6 2125.3 2225.4 2552.8 4121.3 3718.0 4212.7 True False 3018.9472517131157 2531.3976311833353 2374.290187703465 2641.2675952377526 2642.8000446906003 2350.197835340037 2629.7263739558157 2914.6672176221196 3187.832130363735 2878.1012177368552 3166.57032539478 0.9533807689354696 0.7994130466272664 0.7497986602926495 0.8341098803509007 0.834593826480427 0.7421903175471194 0.830465173271642 0.9204492299594655 1.00671445847845 0.908901720784628 1.0 11.62870540479835 -8.460356911402904 2.4613287243799693 1.0033538833080842 0.8143996883766579 0.5493599430453704 0.059516146377840994 0.10535586370730919 1.2593910386295206 0.008735289773757706 0.010469355772618611 3.4645201262246198e-09 8.460356911402904 -0.1889541949314263 GADNDGS(ph)GSESGYTT(ph)PK ddPTM_A549_PD325901_60min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.917)GS(0.083)ESGYT(0.063)T(0.937)PK;GADNDGS(0.94)GS(0.057)ES(0.006)GY(0.033)T(0.175)T(0.788)PK 152.01 8.7379e-17 18425900.0 3196.11 3468.85 3578.69 2845.66 3957.88 3900.2 2924.31 2839.7000000000003 3103.0600000000004 3854.8199999999997 3882.33 True False 3520.5767343481753 3761.182163430135 3821.5614238111743 3021.4299552372327 3679.8921627447585 3868.4380643071877 3035.5962172938316 2783.0599557984456 2972.649179381828 3611.426007332301 3404.8280221175705 1.0339954651097523 1.1046614216629176 1.1223948460793107 0.8873957614335274 1.0807865004753212 1.13616254306474 0.8915564009620368 0.8173863518861585 0.8730688187690148 1.0606779502144255 1.0 11.733366214205137 -7.773501832373845 24.994669705406686 0.9240784792259359 1.058701283396235 0.367313241647479 0.08638159075001457 183.85073468350396 380957.4596476617 0.01344961380689171 0.018659373217908684 1.684605319077853e-08 7.773501832373845 0.13462280417029915 GADNDGS(ph)GSESGYTTPK ddPTM_A549_MK2206_60min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGS(0.963)GS(0.037)ESGYTTPK;GADNDGS(0.988)GS(0.012)ESGYTTPK 274.45 4.362799999999999e-101 275520000.0 26829.0 33735.0 31418.0 26427.0 40037.0 32670.0 31910.0 31912.0 43534.0 46318.0 44729.0 True False 31357.079293926134 35451.96740616483 35873.5448289254 32901.616186353094 34147.61033669318 36127.11771540911 37707.63395026964 36435.62372640122 33673.61850951272 35854.73163075194 33621.55484240111 0.9326481015203028 1.054441639369258 1.0669805426037062 0.9785869910114902 1.0156463761642769 1.074522516425926 1.1215315331792883 1.0836983565213116 1.001548520505838 1.0664209849550002 1.0 15.037098823681907 -2.0000840832910534 13.584353034308531 1.0206977873402496 3.427273843237266e-05 0.0 0.054565761142152044 0.0 0.0 0.0072565521156164525 0.0 0.009998064098084505 2.0000840832910534 -1.0206635146018173 GADNDGS(ph)GSESGYTTPK ddPTM_A549_PD325901_60min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGS(0.987)GS(0.013)ESGYTTPK;GADNDGS(0.918)GS(0.08)ES(0.002)GYTTPK 280.19 1.8843999999999996e-115 376540000.0 72478.0 73219.0 71033.0 74021.0 84234.0 78412.0 80641.0 78382.0 79849.0 81870.0 80639.0 True False 79835.91320451637 79389.42209210282 75853.72653612899 78593.10905611179 78317.6944315244 77773.43866941566 83709.83738344854 76818.60952051052 76493.22421237723 76700.71422797839 70720.91421273799 1.1288868942553436 1.1225734703215062 1.0725784215395011 1.1113135333586495 1.1074191461373686 1.0997233213849968 1.1836645257672733 1.086221952524961 1.08162097540588 1.0845549026310994 1.0 16.109849304189122 -9.91360156815964 0.6339224177929021 1.0021036257959146 1.1149521629509438 0.2882730468113972 0.03597577114278221 0.2991894062414325 0.24460806136762878 0.015744289868095958 0.006490316780258942 1.2201084414307813e-10 9.91360156815964 0.11284853715502918 GADNDGSGS(ph)ES(ph)GYTTPK ddPTM_A549_PD325901_60min_R1 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.158)GS(0.863)ES(0.604)GY(0.003)T(0.097)T(0.276)PK 151.59 7.9895e-17 30969000.0 3739.5 3730.8 3136.6 3816.9 3358.3 3743.7 3277.0 3161.5 3498.0 3309.9 3155.0 True False 4119.1312871256 4045.207609243738 3349.4685379080397 4052.6612441911543 3122.4245935060494 3713.2125484197813 3401.708028243208 3098.441402351228 3350.991224622673 3100.9123491289333 2766.955001192823 1.4886874869124573 1.4619708696020952 1.21052512110392 1.4646646737818534 1.128469596419163 1.3419851594330339 1.229404896999317 1.119801876436553 1.211075432443995 1.120694896661544 1.0 11.434083466346186 -2.000000000010177 0.07313095177079909 0.7261803092590235 2.6222899998874394 0.6253766391079125 0.096037004465567 73.42182929175485 0.3838204777367604 1.633194526345769 14.221044432022554 0.009999999999765662 2.000000000010177 1.8961096906284158 GADNDGSGS(ph)ESGYTT(ph)PK ddPTM_A549_MK2206_60min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.025)GS(0.966)ES(0.008)GY(0.001)T(0.047)T(0.953)PK;GADNDGS(0.009)GS(0.98)ES(0.011)GYT(0.024)T(0.976)PK 165.9 8.6804e-23 21881100.0 5360.1 5230.8 4733.299999999999 5053.1 6957.5 5475.5 5479.5 5932.6 8644.1 7222.200000000001 8397.0 True False 6264.753838136844 5497.025377446777 5404.553114098686 6291.109726842277 5934.060966544521 6054.91377565726 6475.05422220315 6773.564217825516 6686.225151791217 5590.700003964257 6311.79315458969 0.9925473925870589 0.870913422352815 0.8562627104103856 0.9967230504484494 0.9401545363110486 0.9593016797856189 1.0258660357864775 1.0731600437349635 1.0593226026314337 0.8857546289993546 1.0 12.623834211854817 -7.464216937960829 1.4358942434422755 1.0330301587195434 0.9209794165179127 0.2141732982906568 0.06251833988113113 0.2359561784391977 0.9659089945678856 0.00762697787817172 0.013785724999075766 3.433863773363157e-08 7.464216937960829 -0.1120507422016307 GADNDGSGSES(ph)GYTT(ph)PK ddPTM_A549_PD325901_60min_R1 1 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.018)GS(0.445)ES(0.537)GY(0.001)T(0.013)T(0.986)PK 164.01 1.9254e-22 18454000.0 3705.9 3807.7 2931.2 2891.1 3900.8 3189.3 3141.1 3085.8 3723.3 4066.0 3661.9 True False 4082.1202398606115 4128.588242124314 3130.1288587375034 3069.676680835506 3626.8212650294454 3163.327398209044 3260.6362793758735 3024.251298236729 3566.822649124525 3809.272066092097 3211.5095146966714 1.2710908129587684 1.2855600219245376 0.9746596871076515 0.95583608480308 1.129319794455599 0.9849970500578827 1.0152970945452242 0.9416915268028937 1.1106374223093072 1.1861313343958393 1.0 11.649035855366472 -5.75394398787566 24.938723693851102 1.033733646293708 1.2783255567214253 0.6200398800081938 0.07401676695961965 67.270893778409 223818.20858019384 0.00872971885165154 0.03252342983233754 1.7622033078438357e-06 5.75394398787566 0.24459191042771744 GADNDGSGSES(ph)GYTT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 GADNDGSGSESGYTTPKK 18 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.188)GS(0.263)ES(0.448)GY(0.106)T(0.139)T(0.857)PKK 50.215 0.0075173 13906000.0 3951.3 3555.1 4267.1 4515.0 4209.5 4257.9 3476.7 4114.2 4673.2 4671.0 4797.4 True False 4352.433067206678 3854.7007536245364 4556.691066156796 4793.881295691022 3913.8392419866314 4223.225074102248 3609.00772102324 4032.1390534725397 4476.801655490759 4376.0722628421545 4207.350213224234 1.034483189330527 0.9161825277840491 1.0830310849414293 1.1394062896459742 0.9302385215485366 1.0037731256190934 0.8577863829066742 0.9583559364274019 1.0640430267534196 1.0401017365009468 1.0 12.038696195436517 -8.759580722125788 24.993628245815305 1.030242538750998 0.9900063065317378 0.06299245272291465 0.07555971088533261 125.64649743993178 1689583.2557247228 0.013484658077419198 0.014906655304627286 1.739479351721252e-09 8.759580722125788 -0.04023623221926009 GADNDGSGSESGYT(ph)TPKK ddPTM_A549_MK2206_60min_R1 1 GADNDGSGSESGYTTPKK 18 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSESGYT(0.5)T(0.5)PKK 151.45 1.5897e-17 23337000.0 2652.4 2977.6 2761.8 2510.8 3529.8 2884.4 2895.7 2685.2 4144.5 4173.0 3728.9 True False 3100.0602750460184 3129.147121642104 3153.4647688753626 3125.946112714096 3010.5710958977843 3189.6252934902395 3421.81120745208 3065.8353230801144 3205.777367406523 3230.316401725631 2802.911217595509 1.1060144379833123 1.1163918079169337 1.1250676614654167 1.115249777834813 1.074087212252273 1.1379687210451408 1.220806133983615 1.0938039363623355 1.143731327372051 1.1524861656148973 1.0 11.452710332292137 -10.730832001291938 0.8682953312744917 0.9958674767950844 1.1268308826102935 0.0 0.056880345739391186 0.3348482258295583 0.42550984505349626 0.02903994476541638 0.0066103417274226625 1.8585232510603294e-11 10.730832001291938 0.13096340581520916 GADNDGSGSESGYTT(ph)PK ddPTM_A549_MK2206_60min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSESGYT(0.086)T(0.914)PK;GADNDGSGSESGYT(0.009)T(0.991)PK 204.05 1.6358999999999997e-48 137799000.0 6089.9 6970.700000000001 6907.9 5746.5 9079.8 7233.8 6373.9 6652.0 9437.8 8766.1 9259.7 True False 7117.726236239918 7325.478855733009 7887.544093313823 7154.392757970185 7744.173447938331 7999.275914592178 7531.955124902033 7594.941370895618 7300.153369069671 6785.83192167914 6960.260935280947 1.0226234766804205 1.0524718719381345 1.1332253440862483 1.0278914575896432 1.1126268856795012 1.149278164852205 1.082136890403522 1.0911862991224268 1.0488332890029797 0.9749392996579134 1.0 12.764925677371048 -9.428110372335084 0.9617447594837187 1.0098129750798497 1.085615925345602 0.4372340032183535 0.03975791039284064 0.3426968267013322 0.6692806491987837 0.01096606307571968 0.008120132458575728 3.731553114212601e-10 9.428110372335084 0.07580295026575223 GADNDGSGSESGYTT(ph)PK ddPTM_A549_PD325901_60min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSESGYT(0.063)T(0.937)PK;GADNDGSGSESGYT(0.024)T(0.976)PK 254.23 4.011499999999999e-86 69956000.0 9418.5 8659.4 8921.9 8491.099999999999 10758.8 9596.8 11045.6 9956.3 10466.6 11865.2 12993.7 True False 10374.659186466755 9389.15802816694 9527.393785743083 9015.575962312734 10003.139003845063 9518.646842608903 11465.94635238424 9757.713785933747 10026.725200581948 11116.029247072296 11395.55727385077 0.9104126228449875 0.823931449996931 0.8360621211220151 0.791148317335972 0.8778104276478983 0.8352945462747321 1.0061768877854698 0.856273506546682 0.8798801988903288 0.9754704381662928 1.0 13.476183857602619 -14.999999999999877 0.157729736633096 1.5218129989769336 0.8256799430656544 0.46106077904981624 0.05179024582694673 34.16119347552922 0.349179662619261 5.4970961032956085 0.08307600588787602 1.0000000000002823e-15 14.999999999999877 -0.6961330559112792 GADNDGSGSESGYTT(ph)PKK ddPTM_A549_MK2206_60min_R1 1 GADNDGSGSESGYTTPKK 18 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSES(0.007)GY(0.002)T(0.194)T(0.797)PKK 82.635 0.00011363 21278000.0 2270.7 2652.0 1961.6 2332.6 3253.6 2248.4 1778.8 1780.8 3674.4 3546.7 3283.2 True False 2653.9386467150493 2786.975472392148 2239.7843763581404 2904.0871047143946 2774.999750017859 2486.3241956328707 2101.984934839851 2033.233853471274 2842.154266811082 2745.498006709872 2467.89082828973 1.0753873778745116 1.129294473015059 0.907570282559999 1.176748611172137 1.1244418586947615 1.0074692798935174 0.8517333549541756 0.8238751204729436 1.1516531583290173 1.1124876251566307 1.0 11.269062860280437 -7.277713170866718 23.424265412445596 1.0303041382571407 1.0807745166576803 0.08821744221602879 0.11318557932460846 1165.1787439250359 1677138.3486240532 0.019063644413009312 0.030545082113638943 5.275781845989491e-08 7.277713170866718 0.050470378400539584 GADNDGSGSESGYTT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 GADNDGSGSESGYTTPKK 18 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSESGYT(0.094)T(0.906)PKK 203.71 3.6417999999999996e-49 32505000.0 7514.4 7597.6 6906.9 7236.6 9635.9 8973.5 7409.6 8713.4 10277.0 10139.0 11211.0 True False 8277.256356191092 8237.87641577952 7375.643768563743 7683.588346488956 8959.10762605036 8900.422791154446 7691.576382688701 8539.604401469936 9845.093429230184 9498.82180966743 9832.11807238439 0.8418589255391002 0.8378536908458576 0.7501581769323762 0.7814784454297756 0.9112083032458624 0.9052396162891077 0.7822908885006316 0.8685416853826486 1.0013196909099615 0.9661012754054394 1.0 13.263286525578176 -8.694274600070237 3.97964835778885 1.0010845930939314 0.8310966406030837 0.6788796963579763 0.04756906448228476 0.08461337555405814 2.655636479438905 0.008379964320412707 0.009381714476724786 2.0217404481314973e-09 8.694274600070237 -0.16998795249084764 GADNDGSGSESGYTT(ph)PKKR ddPTM_A549_MK2206_60min_R1 2 GADNDGSGSESGYTTPKKR 19 2 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSES(0.132)GY(0.001)T(0.132)T(0.736)PKKR;GADNDGSGSES(0.089)GYT(0.197)T(0.714)PKKR 89.462 1.9592e-06 14078900.0 2237.49 2745.7 2768.3 2073.98 1848.4099999999999 1394.3200000000002 1046.6599999999999 1207.41 2149.93 3723.7 3609.7 True False 2615.123610621596 2885.444402167089 3160.88656661513 2582.1051931045013 1576.5113375739204 1541.8660169252921 1236.824573813515 1378.5640650380458 1662.974287732731 2882.513583778035 2713.3118673481463 0.9638123955052338 1.0634400110397837 1.164955125377615 0.9516433492874228 0.5810284311750432 0.5682597844648923 0.4558357587630812 0.5080743137667343 0.6128946354250232 1.0623598482968557 1.0 11.405839164798714 -6.574385359220808 6.042642554773295 0.7293710637910263 1.0636126349857682 0.4428968933894516 0.18828633183431676 0.1741937843110433 14.080875164715652 0.031529116176929314 0.06664706625850615 2.6644933506512474e-07 6.574385359220808 0.33424157119474185 GADNDGSGSESGYTT(ph)PKKR ddPTM_A549_PD325901_60min_R1 2 GADNDGSGSESGYTTPKKR 19 2 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGSGSES(0.004)GYT(0.15)T(0.846)PKKR;GADNDGSGS(0.002)ES(0.114)GYT(0.114)T(0.769)PKKR 123.99 6.0356000000000005e-15 33556000.0 1906.6 1826.63 1968.48 1732.63 2107.6 3210.8 2468.0 2532.5 2130.9700000000003 2229.7 2673.1 True False 2100.156628435263 1980.5665206585425 2102.07289023185 1839.650620011768 1959.5694468252818 3184.6523093373485 2561.9210905414193 2481.987300792184 2041.4127415477926 2088.916361477016 2344.3256461770325 0.8958468000638291 0.8448342165638618 0.8966642043351649 0.7847248623550852 0.8358776648716935 1.3584513373944715 1.0928179260075181 1.0587212168410312 0.870788896106132 0.8910521304424918 1.0 11.194957270588231 GADS(ph)GEEKEEGINR ddPTM_A549_MK2206_60min_R1 4 GADSGEEKEEGINR 14 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR 158.81 3.7431e-19 804411000.0 10511.5 10544.2 10385.4 9137.3 13329.3 12379.3 10676.7 11779.499999999998 14379.2 13525.5 14555.400000000001 True False 12285.58421849881 11080.85474208043 11858.205884089435 11375.938910188986 11368.577627216937 13689.269309285712 12616.51818855669 13449.280198205795 11122.334158863998 10470.08015613229 10940.892471396299 1.1229051241128687 1.0127925826023834 1.0838426494996953 1.0397633410555918 1.0390905181582555 1.2512022529308946 1.1531525624203987 1.2292671949173604 1.0165838105019365 0.9569676498974016 1.0 13.417442806120642 -8.959281420848214 24.99873418539762 1.0073162949234178 1.1131795475131638 0.3635090770158277 0.07300365621744362 135.34216854672601 83092.25563372861 0.012987551317450446 0.013810361812927703 1.098293919334498e-09 8.959281420848214 0.10586325258974605 GADS(ph)GEEKEEGINR ddPTM_A549_PD325901_60min_R1 4 GADSGEEKEEGINR 14 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR 176.85 1.6413e-23 818073000.0 13790.800000000001 14041.5 14167.3 13741.3 15124.099999999999 14138.400000000001 13116.500000000002 13943.2 13631.3 13986.600000000002 14964.2 True False 15190.831863749621 15224.82648364853 15128.778172895685 14590.068892243406 14061.835391312512 14023.26155797159 13615.655585124201 13665.091937771205 13058.423865122644 13103.483689031918 13123.69826587945 1.157511515122574 1.160101838308173 1.152783145908595 1.1117345580990994 1.0714842041036667 1.0685449538588472 1.0374861802883568 1.0412531331430666 0.9950262190249746 0.9984596889963488 1.0 13.67988670910943 -7.006898733585597 0.5402411255227523 0.9955567971051341 1.1809817159901834 0.9674226105302917 0.011132173355864798 0.1289391675943676 0.0642622344489738 0.002654232203812498 0.01087529250685344 9.8424057884696e-08 7.006898733585597 0.1854249188850493 GADS(ph)GEEKEEGINREDK ddPTM_A549_MK2206_60min_R1 4 GADSGEEKEEGINREDK 17 2 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK 176.84 1.0545e-30 1602850000.0 31434.8 32858.100000000006 31686.4 28246.9 41220.5 33293.8 31526.5 33983.0 42044.5 44132.3 42537.7 True False 36740.22573292738 34530.43694170756 36180.007984825956 35167.39176805154 35157.01905446616 36816.9278173642 37254.45696437408 38800.19431857272 32521.487881270008 34162.78277878651 31974.415109204463 1.149050752216918 1.0799395961981895 1.1315299392110172 1.0998603617280216 1.0995359550563137 1.1514496103093916 1.1651333366735974 1.2134762805216512 1.0171097038115346 1.0684412103273182 1.0 14.964630348452518 -8.861328100475406 8.405498425347073 1.007607160220514 1.1331420219163102 0.5863581346179969 0.039225549748286334 0.09595446678420654 7.274660098739212 0.006279049780412387 0.006674074442678603 1.376169408619914e-09 8.861328100475406 0.12553486169579609 GADS(ph)GEEKEEGINREDK ddPTM_A549_PD325901_60min_R1 4 GADSGEEKEEGINREDK 17 2 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK 162.83 5.5612e-23 1933530000.0 56592.9 56240.3 56058.8 52322.4 65980.7 50120.899999999994 55459.399999999994 56806.600000000006 60215.9 61802.3 63865.2 True False 62338.169546509 60979.86745635001 59863.287276949326 55554.23581520792 61346.44325305796 49712.73200793143 57569.93781554816 55673.54779908443 57685.23512943293 57900.0922307535 56010.18527485893 1.1129791704954508 1.088728186795015 1.0687928808516176 0.9918595259520473 1.0952729927960851 0.8875659268751926 1.0278476590112147 0.9939897096550829 1.0299061652153805 1.0337422014696118 1.0 15.773401580101782 -5.951537847766419 1.3083717588489456 1.0083456844718042 1.1156909859632578 0.38588755639302985 0.047290022355369665 0.4166768376363073 1.172209892571463 0.006357450154115764 0.042384516621472586 1.1180523846415612e-06 5.951537847766419 0.1073453014914536 GADS(ph)GEEKEEGINREDKTDK ddPTM_A549_MK2206_60min_R1 4 GADSGEEKEEGINREDKTDK 20 3 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINREDKTDK;GADS(1)GEEKEEGINREDKTDK;GADS(1)GEEKEEGINREDKTDK;GADS(1)GEEKEEGINREDKTDK 211.5 5.856299999999999e-67 1085010000.0 39948.7 43697.899999999994 41562.2 36691.3 54240.6 44304.3 42022.8 42190.5 61539.2 60431.7 64579.9 True False 46691.06390805719 45921.93646117829 47456.34492611759 45680.67014713506 46261.87959208833 48992.55161918582 49657.798808066196 48171.13257798729 47600.66945790887 46780.13699836159 48542.92851543247 0.9618509911945972 0.9460067174682111 0.977616027245463 0.9410365535036178 0.9530096557190825 1.0092623811027472 1.0229666879755575 0.9923408836504997 0.980589159197018 0.963685925613028 1.0 15.56697352609467 -7.250325782402107 24.877070786362374 0.9945754644707037 0.9557343941009226 0.5758252394569008 0.016624909375773128 364.59513477224255 816122.2170022087 0.002249637559777403 0.0038744193075438338 5.619196476899125e-08 7.250325782402107 -0.03884107036978102 GADS(ph)GEEKEEGINREDKTDK ddPTM_A549_PD325901_60min_R1 4 GADSGEEKEEGINREDKTDK 20 3 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINREDKTDK;GADS(1)GEEKEEGINREDKTDK;GADS(1)GEEKEEGINREDKTDK;GADS(1)GEEKEEGINREDKTDK 216.67 2.7368999999999996e-67 2485880000.0 38856.0 37314.4 39889.50000000001 35926.5 49030.1 39752.2 45863.7 45371.9 48357.5 42368.9 49311.5 True False 42800.63251572466 40459.015442898184 42596.64134504968 38145.59830999854 45586.39492066249 39428.47126299988 47609.06820107965 44466.92186093304 46325.202442736096 39693.7204232783 43246.498111353365 0.989690134112578 0.9355443147956668 0.9849731933293095 0.88205057000868 1.0541060412171233 0.9117147742570364 1.1008768404436657 1.028220175109607 1.0711896792997093 0.9178481994327682 1.0 15.400295694681976 -7.755357242903412 24.999996496264938 1.0385664876546539 0.9604959683077743 0.19859717369408525 0.06066626079383743 118.05848055362513 485265.2713780938 0.007334656655111483 0.010726436925872449 1.7564781718920116e-08 7.755357242903412 -0.07807051934687959 GADTAPTLAPEALPS(ph)QGEVER ddPTM_A549_MK2206_60min_R1 2 GADTAPTLAPEALPSQGEVER 21 0 Q8IZL8;C9JFV4 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 GADTAPTLAPEALPS(1)QGEVER;GADTAPTLAPEALPS(1)QGEVER 122.57 5.7799e-15 3983400.0 1258.47 1208.4099999999999 1505.72 1178.25 1654.48 1673.5 1388.39 1991.1 2022.3500000000001 1762.73 2162.7 True False 1470.868969362526 1269.9129074635725 1719.253737341954 1466.9213028936515 1411.1081836764033 1850.5886592206066 1640.6424913887465 2273.3445224880134 1564.290954029336 1364.528068730847 1625.6419025165071 0.9047927265442708 0.781176288269721 1.0575845361026528 0.9023643525814912 0.8680313797841924 1.1383741132385183 1.0092274866002275 1.3984288415356771 0.9622604779120179 0.8393780122292286 1.0 10.66679377924556 -7.237348559742834 24.54282000912884 1.0284674297711507 0.9046096080687734 0.20787488636831497 0.1446782745189868 924.667658083433 942016.5884853795 0.020292269824226508 0.03513505948429132 5.789638402062511e-08 7.237348559742834 -0.12385782170237725 GADYIRGS(ph)R ddPTM_A549_MK2206_60min_R1 1 GADYIRGSR 9 1 A0A5H1ZRR2;Q6P9H4 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 GADYIRGS(1)R 62.408 0.0020059 7424700.0 979.69 1175.8 929.26 1113.0 1552.1 1167.2 1098.4 1166.0 1566.6 1610.1 1685.2 True False 1145.0377208791424 1235.6431977521447 1061.0430411778982 1385.6850499644695 1323.7881460544374 1290.7123292753463 1297.9650620801067 1331.2840707252396 1211.7676013461346 1246.3772917369854 1266.7183308460808 0.9039402785892708 0.9754680007881625 0.837631393925747 1.0939172633895076 1.0450532796586578 1.0189418577476803 1.024667465902349 1.0509708735611598 0.9566196145095311 0.9839419398821607 1.0 10.306880045235637 -6.2543298482103635 24.981284135595956 1.001061406542758 0.912658709661949 0.4998203482244491 0.04847192947003212 461.97531380173746 1623270.9776182142 0.007227654751843333 0.01868735266047638 5.567627250296914e-07 6.2543298482103635 -0.08840269688080915 GADYIRGS(ph)R ddPTM_A549_PD325901_60min_R1 2 GADYIRGSR 9 1 A0A5H1ZRR2;Q6P9H4 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 GADYIRGS(1)R;GADYIRGS(1)R 51.251999999999995 0.0073704999999999994 21138000.0 4994.1 4319.8 5238.7 5054.4 5601.8 5780.4 5307.8 5982.5 5873.799999999999 5747.5 6894.4 True False 5501.097355537894 4683.844706339421 5594.229684862227 5366.59880862474 5208.348893160882 5733.326338885514 5509.791233539609 5863.174344319542 5626.944612689724 5384.60186912551 6046.432507202472 0.9098087755027484 0.7746459917910362 0.9252116315196467 0.8875644939775779 0.8613920500984225 0.9482163791716871 0.9112466279870618 0.9696915226185632 0.9306222480755293 0.8905419621754492 1.0 12.561868464699295 -2.0000000001171476 0.06528105119451816 1.1206262946020795 0.4283935022844964 0.17296917350178576 0.05155153789140145 114.96205932758468 0.5418480634354206 1.0602115822203448 7.395938086836857 0.009999999997302576 2.0000000001171476 -0.6922327923175831 GAEAANVTGPGGVPVQGSK ddPTM_A549_MK2206_60min_R1 1 GAEAANVTGPGGVPVQGSK 19 0 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 114.74 1.9007000000000002e-13 1549600.0 604.18 485.7 659.36 608.31 888.67 820.52 608.07 687.6 1015.8 1169.7 914.41 False True 706.1508132172007 510.4200554075663 752.8671627220143 757.3459773080732 757.9478202140308 907.346881782905 718.5484480144306 785.0694056866845 785.7229218992752 905.4639576080687 687.3367605678646 1.0273723940413027 0.742605495137299 1.0953395859403907 1.1018557725362577 1.1027313883049534 1.320090723844411 1.0454096001220412 1.1421903362742813 1.143141131066707 1.3173512745920812 1.0 9.424873310306412 -5.790903271915203 24.259620996731986 1.0951945660760132 0.8849890345787119 0.36068580660541183 0.11932660214534956 95.31214479418858 78476.99862908894 0.01400334710791725 0.043549311884223334 1.61844046408329e-06 5.790903271915203 -0.21020553149730126 GAEADQIIEYLK ddPTM_A549_MK2206_60min_R1 1 GAEADQIIEYLK 12 0 D6R937;A0A5F9ZHC5;Q12904;Q12904-2 D6R937 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 0 116.77 6.4699e-05 490180.0 1112.2 1041.8 777.02 1094.7 1323.7 1221.7 1173.6 1031.1 1363.7 1518.3 1466.1 False True 1299.9121693206853 1094.8231701124212 887.2131199621746 1362.90154914295 1128.985483494787 1350.9794831011736 1386.82792867554 1177.2615826113154 1054.8241273814144 1175.3149754948536 1102.0269076984573 1.179564818463012 0.9934631926537248 0.8050739176732867 1.236722569677831 1.0244627201096494 1.2259042621043117 1.2584338177112928 1.0682693629232547 0.9571673069075743 1.0665029749132493 1.0 10.105943734641214 -8.653665592201543 5.425888472117369 0.9799865367006395 1.0988556970552645 0.08451687786048612 0.1274550068169848 0.2967884762619207 13.238515715938108 0.021536154967731726 0.024385690738822456 2.2199050941503687e-09 8.653665592201543 0.11886916035462503 GAEAFGDS(ph)EEDGEDVFEVEK ddPTM_A549_MK2206_60min_R1 1 GAEAFGDSEEDGEDVFEVEK 20 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GAEAFGDS(1)EEDGEDVFEVEK 119.79 7.5699e-15 1570400.0 1055.3 1089.7 1144.2 659.85 1395.0 1089.8 864.68 1327.5 1806.1 1434.5 1470.6 True False 1233.4088403921223 1145.1610755149793 1306.4647652064552 821.5132796217925 1189.7973479453262 1205.121912649307 1021.7811634007891 1515.6771902982466 1397.0212337490455 1110.445453696481 1105.409433504775 1.115793662517893 1.0359610120968201 1.1818831336224631 0.7431755643853422 1.076340866906657 1.0902041145319221 0.9243463394021916 1.3711455179938985 1.2638043347610084 1.0045557962860323 1.0 10.110365114261379 GAEAFGDS(ph)EEDGEDVFEVEK ddPTM_A549_PD325901_60min_R1 2 GAEAFGDSEEDGEDVFEVEK 20 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GAEAFGDS(1)EEDGEDVFEVEK;GAEAFGDS(1)EEDGEDVFEVEK 168.75 8.796399999999999e-35 24832000.0 2261.62 2704.13 2706.8 2872.8 3330.0 3149.08 3043.8 3072.6000000000004 3136.3 3405.9 3834.4 True False 2491.2179974833534 2932.016525245059 2890.499725310681 3050.2463313978205 3096.1122878763485 3123.4349365541448 3159.633474631272 3011.31458259193 3004.492217777039 3190.8508927454695 3362.7931082642667 0.7408180989074336 0.871899171566473 0.8595532440598571 0.9070573874740187 0.9206966316980566 0.9288216182191272 0.939586044370759 0.8954801813978513 0.8934514021672396 0.9488692256754545 1.0 11.715444306207875 -2.0000000000000004 0.22740158937535546 0.9642734977349029 1.5083132443448515e-11 0.7249535164058001 0.03282363378858558 22.546452576353715 0.2652502588667125 0.023876362165022254 8.182890346808838 0.00999999999999999 2.0000000000000004 -0.9642734977198197 GAEEEEEEEDDDS(ph)GEEMK ddPTM_A549_MK2206_60min_R1 2 GAEEEEEEEDDDSGEEMK 18 0 Q08495-2;Q08495;Q08495-3;Q08495-4;E5RFK4 Q08495-2 DMTN Dematin 1 GAEEEEEEEDDDS(1)GEEMK;GAEEEEEEEDDDS(1)GEEMK 112.44 3.2234e-10 9521900.0 1551.3700000000001 2140.69 2292.9 1547.98 1238.96 855.76 803.76 467.08 1027.46 3731.75 4202.38 True False 1813.2033286450564 2249.641977373735 2618.067698078906 1927.2351694914628 1056.7106252403873 946.3159551924856 949.7927879620416 533.2900203725084 794.7419505164693 2888.7450831870647 3158.8130662122917 0.574014128293845 0.712179521300785 0.8288137484559067 0.6101137133139681 0.3345277492179937 0.2995796001082159 0.30068027707031453 0.1688260777684994 0.25159511938749773 0.9145033348399234 1.0 11.625166847758832 -10.885610705775521 1.1688565667206057 0.9960664275530744 0.4408398743126314 0.4850888981737198 0.19934795350457535 0.35655329155227566 0.8747822863404999 0.15663940420956765 0.03875658731022652 1.3013355505426065e-11 10.885610705775521 -0.555226553240443 GAEETSWS(ph)GEER ddPTM_A549_MK2206_60min_R1 2 GAEETSWSGEER 12 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 GAEETS(0.002)WS(0.998)GEER;GAEETSWS(1)GEER 219.43 3.0720999999999997e-32 79210000.0 3879.6 3201.8 2322.84 1904.96 5109.3 3436.0 3274.6000000000004 3051.6 5234.6 5127.6 5278.299999999999 True False 4534.381632886648 3364.757944006476 2652.2536402833107 2371.6752855169043 4357.728738248784 3799.595239367791 3869.552432891041 3484.1736451330517 4048.971457938514 3969.271598727136 3967.552436330921 1.1428662142849748 0.8480689286410813 0.6684860963642459 0.597767848963872 1.0983418135435374 0.9576673025351488 0.9752996324528712 0.8781670062450683 1.0205212213106596 1.0004333055262162 1.0 11.954033574927251 -6.783673925532837 24.999865907131635 0.9982489026125421 0.806294289678371 0.27576544398347524 0.13638715345481747 213.98598808190377 240599.05283482737 0.01948197539504065 0.03683757618463309 1.6456068044670505e-07 6.783673925532837 -0.19195461293417104 GAEETSWS(ph)GEER ddPTM_A549_PD325901_60min_R1 2 GAEETSWSGEER 12 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 GAEETS(0.002)WS(0.998)GEER;GAEETSWS(1)GEER 155.86 9.2422e-14 95642000.0 5172.9 4432.8 4008.3 4398.0 4115.9 3986.9 3733.4 3127.5 5856.7 5404.4 6579.299999999999 True False 5698.04899991229 4806.367612912952 4280.327341865967 4669.654471417302 3826.8133830841603 3954.43200825248 3875.4765799948673 3065.119559023714 5610.563266222873 5063.165261679325 5770.087809619 0.9875151276577424 0.8329799773411624 0.74181320685111 0.8092865525603917 0.6632157965957967 0.6853330726891645 0.6716494978697327 0.5312084772633823 0.9723531861802531 0.877484958415849 1.0 12.494377558738726 -8.887121927813563 10.508111264400023 0.9878018247390824 0.7391872452151037 0.38881091141097246 0.11449776473634865 0.19559363847071376 17.369285289972524 0.019469695364015875 0.020710534529808068 1.2968151401026748e-09 8.887121927813563 -0.2486145795239787 GAEFLLR ddPTM_A549_PD325901_60min_R1 2 GAEFLLR 7 0 Q9BXT2 Q9BXT2 CACNG6 Voltage-dependent calcium channel gamma-6 subunit 0 ; 59.205 0.039015 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GAEQDNPNQYSWGENYAGSSGLMSAS(ph)PELGPAQR ddPTM_A549_MK2206_60min_R1 1 GAEQDNPNQYSWGENYAGSSGLMSASPELGPAQR 34 0 H0YA31;H0YA26;E9PHT6;Q9NVE7 H0YA31 PANK4 Pantothenate kinase 4 1 GAEQDNPNQY(0.025)S(0.09)WGENY(0.085)AGS(0.09)S(0.09)GLMS(0.09)AS(0.533)PELGPAQR 40.056 0.020822999999999998 1451900.0 260.48 502.7 378.08 580.14 639.65 179.72 237.57 368.1 663.92 524.25 529.8 True False 304.4426558754288 528.2852827946957 431.69742914635276 722.2743260434746 545.5583323392311 198.73785111151915 280.73339384411037 420.27930225897154 513.5431800623811 405.82156089256205 398.2360382638582 0.7644779141603328 1.3265632239055953 1.0840240150750098 1.8136839879993967 1.3699371225106505 0.4990453701225351 0.7049422123321386 1.055352258151253 1.2895447190093936 1.019047805572227 1.0 8.637479973043005 -11.297417038791812 1.8652543887892818 0.9995603445445873 1.137758590772127 0.0010283900169919535 0.3456190208866919 1.6675285665916837 10.480405635199777 0.27348351720580716 0.05403326111040162 5.041769204222521e-12 11.297417038791812 0.13819824622753973 GAES(ph)PFEEK ddPTM_A549_MK2206_60min_R1 4 GAESPFEEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK 172.21 1.5047e-07 3535574200.0 34619.200000000004 39423.5 33589.13 34951.0 45835.2 35012.4 36400.299999999996 35309.2 55232.5 50032.799999999996 50921.9 True False 40462.07460182219 41429.987758616815 38352.57370996252 43513.996569010014 39092.90279752227 38717.38892864986 43013.76333688504 40314.38722988991 42722.42693817846 38730.35573071127 38276.586857056165 1.0570972472788058 1.0823845896536444 1.0019852045113147 1.136830635696776 1.0213267693777044 1.01151623244883 1.12376172665342 1.0532388214352524 1.1161503792834317 1.0118549983401004 1.0 15.224174569249675 -11.075898946943397 1.4126243723583813 1.0002157284473356 1.072264742039256 0.22072982120126183 0.0434357321028191 0.4476870231317865 1.6027811257989506 0.030118264507476167 0.006724172771173778 8.396553375337313e-12 11.075898946943397 0.07204901359192029 GAES(ph)PFEEK ddPTM_A549_PD325901_60min_R1 2 GAESPFEEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GAES(1)PFEEK;GAES(1)PFEEK 155.0 1.4754000000000001e-05 4869000000.0 44511.0 44686.0 47839.0 44712.0 50847.0 47494.0 49570.0 49148.0 46996.0 47701.0 52505.0 True False 49029.723952733686 48451.846045530634 51085.64221927654 47473.75869168039 47275.68213262721 47107.224610585516 51456.41347574481 48167.704584139894 45020.921552992324 44689.1507192964 46047.21785661782 1.0647706036313165 1.0522209223671313 1.1094186488822713 1.0309799571280192 1.026678360456751 1.0230199956329251 1.1174706284312375 1.0460502680992554 0.9777120887776286 0.9705070751168902 1.0 15.490826371789769 -8.681626800059034 5.433644700084038 0.9895232549205611 1.0597219004213936 0.5621723430174836 0.029883017635823707 0.11546834676335586 5.846265733478996 0.0050442273154160085 0.0056989521647747305 2.081484589755031e-09 8.681626800059034 0.07019864550083244 GAES(ph)PRPGR ddPTM_A549_MK2206_60min_R1 1 GAESPRPGR 9 1 Q03518;A0A140T9T7;A0A0S2Z4R8 Q03518 TAP1 Antigen peptide transporter 1 1 GAES(1)PRPGR 41.283 0.025099 8648000.0 636.67 598.81 464.53 348.71 889.98 584.56 550.6 326.01 645.92 887.25 946.0 True False 744.1243309129658 629.2868712756945 530.4073390852606 434.1439656541866 759.0651209493775 646.4177512004766 650.6368929181597 372.2229158637525 499.62015132228714 686.8196087781134 711.0820917282174 1.0464675451247019 0.884970777067768 0.7459157602973181 0.6105398669217517 1.0674788885549655 0.9090620600912894 0.9149954702653931 0.5234598370479281 0.7026195106503215 0.9658794909443771 1.0 9.47387231290014 -11.027118335688124 1.3758370729042126 0.9980603303184749 0.8065619573652516 0.12031629098481289 0.16177151172181375 0.6561581801792382 2.2491574628892974 0.11302758776436116 0.026603857384207386 9.394672915258229e-12 11.027118335688124 -0.19149837295322325 GAES(ph)PRPGR ddPTM_A549_PD325901_60min_R1 2 GAESPRPGR 9 1 Q03518;A0A140T9T7;A0A0S2Z4R8 Q03518 TAP1 Antigen peptide transporter 1 1 GAES(1)PRPGR;GAES(1)PRPGR 64.439 0.0017494 21541000.0 2091.24 2303.7799999999997 2070.84 1777.46 2655.3 1959.48 2067.96 1891.0700000000002 1977.47 2294.9 2024.88 True False 2303.541145310479 2497.9276257166116 2211.379655372533 1887.2496672954521 2468.8008882877075 1943.5226445435226 2146.6573494311315 1853.3511253342836 1894.3638127371619 2149.9996223499156 1775.832596771894 1.2971612017359366 1.4066233665590668 1.2452635791190991 1.0627407508602398 1.390221630561062 1.0944289726838303 1.2088174039227133 1.043651934705615 1.0667468409920697 1.2106994917528724 1.0 10.794279873562937 -6.4513894918492305 0.25236478003159374 0.9835413993875226 1.4979717043634992 0.3211119716549643 0.11110208556409801 2.476974121948032 0.20196870357339436 0.060991035462961606 0.3853616059323838 3.5368000509226835e-07 6.4513894918492305 0.5144303049759766 GAFFMEFVRS(ph)PR ddPTM_A549_MK2206_60min_R1 1 GAFFMEFVRSPR 12 1 A0A2R8Y7C9 A0A2R8Y7C9 1 GAFFMEFVRS(1)PR 45.115 0.014719 41554000.0 2071.5 2374.6 1799.6 1857.5 2805.6 2450.0 2197.0 2418.0 3315.8 3178.4 3202.2 True False 2421.118556687466 2495.4569972633467 2054.8103403823966 2312.5875833863442 2392.899956555846 2709.257373821621 2596.1664615713707 2760.7589048144328 2564.7765942445526 2460.397232505331 2407.005363776004 1.0058633824103 1.0367475847035854 0.8536791696878069 0.9607737557171284 0.9941398521862744 1.1255718057775566 1.0785877342203423 1.1469683226976595 1.0655466883634377 1.0221818652890613 1.0 11.233023641382855 -7.017337045757522 15.750337188732896 1.0515701946941167 0.9635313536024733 0.4119536966157915 0.05897088191813097 6.0663336005500845 5512.630417780188 0.009559414847572806 0.01692703798218613 9.608662831689246e-08 7.017337045757522 -0.0880388410916434 GAFFMEFVRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GAFFMEFVRSPR 12 1 A0A2R8Y7C9 A0A2R8Y7C9 1 GAFFMEFVRS(1)PR 41.227 0.027054 72463000.0 5320.7 5330.3 5422.3 6723.0 7265.6 7138.1 6219.9 6495.9 6956.7 6835.9 9448.0 True False 5860.85354710768 5779.50308768948 5790.289884938716 7138.264440959188 6755.289320959275 7079.969680229514 6456.6016981598805 6366.334178565035 6664.334091575911 6404.280107378006 8285.955895806592 0.7073237681694369 0.6975058955617187 0.6988077124413734 0.861489553012437 0.8152697656015806 0.854454183591852 0.7792223105396298 0.7683282723948541 0.8042927304197502 0.7729078199196213 1.0 13.016452425873432 -14.999999999958902 0.1485354939939718 1.8246905128001214 0.7021031329434283 0.01871184243096824 0.08360401425416181 23.640693056174584 0.23189174945748528 5.697141892436649 0.10629653640223691 1.0000000000946312e-15 14.999999999958902 -1.122587379856693 GAFGKPQGTVAR ddPTM_A549_MK2206_60min_R1 1 GAFGKPQGTVAR 12 1 H7C123;H7C2C5;F8W7C6;A0A087WV22;X1WI28;P27635;Q96L21 H7C123 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like 0 52.495 0.024978 4733500.0 2660.7 2528.1 3164.7 2449.0 3648.6 3135.1 2533.0 2685.2 3757.8 3512.8 4140.2 False True 3109.761112130503 2656.7694916118353 3613.502047237257 3049.0051099397892 3111.895773271193 3466.854201089049 2993.213312316925 3065.8353230801144 2906.6642999735122 2719.2560402544464 3112.0740762929886 0.9992567772791447 0.8536973820290619 1.1611234047299912 0.9797341050350815 0.9999427060483058 1.114001182522835 0.9618065762375274 0.9851421424814051 0.933995858940429 0.8737761292281141 1.0 11.603660685676626 GAFGKPQGTVAR ddPTM_A549_PD325901_60min_R1 2 GAFGKPQGTVAR 12 1 H7C123;H7C2C5;F8W7C6;A0A087WV22;X1WI28;P27635;Q96L21 H7C123 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like 0 ; 94.12200000000001 0.00026544 20344000.0 7229.8 7799.299999999999 7757.1 7936.200000000001 9558.5 8394.8 8818.6 8681.099999999999 8930.7 9586.2 9684.8 False True 7963.763973702538 8456.574382645726 8283.543453231678 8426.401049582082 8887.143935034852 8326.435532087069 9154.196648723086 8507.948650308797 8555.373736345826 8980.92569600887 8493.630997005466 0.9376159591239908 0.9956371292356819 0.9752652847942349 0.9920846635029134 1.0463303548468403 0.9803151955886306 1.07777188012412 1.0016856928807454 1.0072692985322917 1.0573717764728896 1.0 13.05216571729911 -3.8333406192358077 0.7726595826232887 1.0090523314597657 0.392074021932154 0.35120350018244717 0.030769797417579674 14.925695265611111 1.1213079926657945 0.0039831754410187435 13.053740498916634 0.00014677746434256855 3.8333406192358077 -0.6169783095276117 GAGAGHPGAGGAQPPDS(ph)PAGVR ddPTM_A549_MK2206_60min_R1 2 GAGAGHPGAGGAQPPDSPAGVR 22 0 Q13884;A0A3B3ITC2;Q13884-2 Q13884 SNTB1 Beta-1-syntrophin 1 GAGAGHPGAGGAQPPDS(1)PAGVR;GAGAGHPGAGGAQPPDS(1)PAGVR 86.604 1.6666999999999999e-06 18720800.0 1349.44 1482.12 1683.81 1444.3 1826.81 1322.43 1753.83 1181.18 1793.19 1905.73 2561.46 True False 1577.1924813595622 1557.5535773536392 1922.5995772612139 1798.1535648370898 1558.0886689605745 1462.368664842011 2072.478209056767 1348.6158822120394 1387.035328136012 1475.2242694130327 1925.3787893003805 0.8191595805065777 0.8089595595470349 0.9985565375215458 0.9339219767194381 0.809237474526627 0.7595225796443866 1.076400249433431 0.700441850562861 0.7203960778232189 0.766199501942722 1.0 10.910926586929921 GAGATSGS(ph)PPAGR ddPTM_A549_MK2206_60min_R1 2 GAGATSGSPPAGR 13 0 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGATS(0.004)GS(0.996)PPAGR;GAGATS(0.007)GS(0.993)PPAGR 109.15 6.6175e-05 26426000.0 2816.6000000000004 2643.6 2958.6 2539.1 2996.2 2800.0 2836.7 3044.24 3804.4 3299.2 3254.1 True False 3291.9732207414495 2778.147948271449 3378.1739681347854 3161.1796139845314 2555.4629490421403 3096.294141510425 3352.0916711604514 3475.7703425939985 2942.709474378421 2553.908428606087 2446.0171614088713 1.3458504186639964 1.135784324044266 1.3810916871037016 1.2923783462597362 1.0447444888613249 1.2658513563850073 1.3704285170385697 1.4209918055489046 1.2030616631828788 1.0441089575737366 1.0 11.25621881060123 -9.954817115634338 0.8957174386997518 1.0217565470133456 1.2724797637875085 0.446249311819093 0.10735524058959255 0.3426815334473659 0.5598706193933094 0.04299571986245742 0.02195006501238865 1.1096419946944703e-10 9.954817115634338 0.25072321677416287 GAGATSGS(ph)PPAGR ddPTM_A549_PD325901_60min_R1 2 GAGATSGSPPAGR 13 0 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGATS(0.008)GS(0.992)PPAGR;GAGATS(0.002)GS(0.998)PPAGR 80.318 0.00069408 35191000.0 2964.5 3133.9 2642.7 2815.3 3085.3999999999996 2548.2 2636.2 2836.2 3049.0 2869.5 2941.3 True False 3265.4538576504433 3398.004751423006 2822.0495138460687 2989.194686989798 2868.692148052158 2527.4483040530185 2736.52203358399 2779.629766044144 2920.8611331831116 2688.319280288065 2579.5387464369105 1.2659061090518529 1.3172916111908122 1.094013229203917 1.158809764388591 1.1120950022614127 0.979806295813217 1.06085711539085 1.0775685264986297 1.1323191548169866 1.0421705368843215 1.0 11.332897401582043 -5.878687213079193 1.0445621452319536 1.0616333744915594 1.3277812558211677 0.6919350576165071 0.054856142027670994 0.3979264817326768 0.6031765564878603 0.009569748229549688 0.09202007505455849 1.3222475985177964e-06 5.878687213079193 0.2661478813296083 GAGATSGS(ph)PPAGRN ddPTM_A549_MK2206_60min_R1 4 GAGATSGSPPAGRN 14 1 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.003)S(0.021)GS(0.976)PPAGRN;GAGAT(0.004)S(0.014)GS(0.982)PPAGRN;GAGAT(0.006)S(0.027)GS(0.966)PPAGRN;GAGAT(0.001)S(0.02)GS(0.979)PPAGRN 122.46 1.2781e-06 49561900.0 3698.5 3851.2100000000005 3616.9300000000003 3258.07 5222.33 3317.29 3786.02 2977.49 6158.7 6244.599999999999 5336.71 True False 4322.716380356548 4047.2201391520966 4129.865061368804 4056.2972962603226 4454.132174978718 3668.3234259611136 4473.890826963332 3399.5583256806985 4763.764283422978 4833.940522936948 4011.457621296931 1.077592433585023 1.0089150930238677 1.029517310476682 1.0111779007025616 1.1103525440058537 0.9144614681919836 1.1152780982182964 0.8474621064503727 1.1875394764566456 1.2050334265712876 1.0 11.969910840771245 GAGATSGS(ph)PPAGRN ddPTM_A549_PD325901_60min_R1 4 GAGATSGSPPAGRN 14 1 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.001)S(0.011)GS(0.988)PPAGRN;GAGAT(0.003)S(0.009)GS(0.988)PPAGRN;GAGAT(0.002)S(0.01)GS(0.988)PPAGRN;GAGATS(0.007)GS(0.993)PPAGRN 211.83 2.1538999999999997e-38 64187000.0 5705.01 6460.18 6249.25 6115.32 6322.82 7626.18 6832.35 6807.94 8014.97 7811.030000000001 7855.0 True False 6284.17841539361 7004.602040603684 6673.361684793034 6493.049427500598 5878.72693574484 7564.074918531916 7092.358818055373 6672.150295974384 7678.1286837089665 7317.8402327612785 6888.884796947587 0.9122199892467474 1.016797674379367 0.9687143683619082 0.9425399928850049 0.8533640943378324 1.0980115274802535 1.0295365689956006 0.968538521493459 1.1145677290337455 1.0622677615401201 1.0 12.750054736657834 -7.276553662901329 24.9410023934373 1.0489282094220078 0.9449422387692245 0.49598283185753855 0.05335947566208182 589.3881104803612 972583.79696084 0.00905927173791822 0.014515814615340527 5.2898862953928557e-08 7.276553662901329 -0.10398597065278337 GAGDGS(ph)DEEVDGK ddPTM_A549_MK2206_60min_R1 2 GAGDGSDEEVDGK 13 0 P35579;P35579-2 P35579 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK 120.9 9.8337e-06 205850000.0 6949.5 6555.7 5639.0 6052.700000000001 7545.9 5363.0 5225.9 6224.9 6731.5 7146.1 9772.6 True False 8122.405701037672 6889.357128341328 6438.69499300752 7535.611771716031 6435.908105993282 5930.509100328719 6175.378384854721 7107.298637956723 5206.825997996623 5531.791046818003 7345.793709961079 1.1057219984306785 0.9378642254817459 0.8765145397802948 1.0258403746755853 0.8761351543626975 0.8073340110663333 0.8406686368663953 0.9675331105907656 0.7088173454879406 0.7530555941581585 1.0 12.84270266646607 -2.000000000076314 0.6266008473208279 0.8666643644194398 18.083766554895895 0.3669151173103218 0.09151687662661152 187.22739204316636 1.210433095031811 0.01872024667002299 4458.256670984474 0.009999999998242803 2.000000000076314 17.217102190476457 GAGDGS(ph)DEEVDGK ddPTM_A549_PD325901_60min_R1 2 GAGDGSDEEVDGK 13 0 P35579;P35579-2 P35579 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK 142.38 2.4724e-12 314780000.0 10892.099999999999 8976.3 9377.3 9181.8 9558.0 9702.6 9346.5 9155.9 10184.6 9243.0 10934.3 True False 11997.857973659775 9732.764303327589 10013.699968285742 9748.938932619227 8886.679053309954 9623.585242486775 9702.186172101041 8973.278391835398 9756.576679900536 8659.395402579748 9589.450418238572 1.2511517814243611 1.0149449529262327 1.0442412788578868 1.0166316636954833 0.9267141145448765 1.0035596225810064 1.0117562267852236 0.9357448029314328 1.0174281376275849 0.9030126884133095 1.0 13.227232419863604 -3.9389758504001744 1.3122279872148899 0.9989590477065646 7.523843669408213 0.7392501985275237 0.04448178350335757 11.508362697109463 0.9236878276639499 0.004781021279312479 204.58561069735893 0.00011508643827153333 3.9389758504001744 6.5248846217016485 GAGDGS(ph)DEEVDGKADGAEAK ddPTM_A549_MK2206_60min_R1 1 GAGDGSDEEVDGKADGAEAK 20 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGKADGAEAK 179.33 1.0221e-35 57884000.0 4961.2 5135.0 4243.6 4170.8 6295.6 4860.0 5119.6 5492.0 6485.7 6279.5 6182.7 True False 5798.5292703055065 5396.349566641656 4845.406290534976 5192.646187234327 5369.525579730889 5374.281974193096 6049.765050824209 6270.507818544606 5016.699305534676 4860.956588697845 4647.364956160731 1.2477025852292376 1.1611632866250456 1.042613682429161 1.1173312697017155 1.1553914165085817 1.1564148770086875 1.301762419756684 1.3492608989599952 1.0794717765568078 1.045959728696144 1.0 12.18219722836352 -8.973139108665105 13.998810592810674 1.0350380458214197 1.1862025333037598 0.4091289372102732 0.08140586186322747 1.1534928272486746 600.5709085122099 0.01585388109903924 0.016515633366281007 1.0638022176489196e-09 8.973139108665105 0.15116448748234013 GAGDGS(ph)DEEVDGKADGAEAK ddPTM_A549_PD325901_60min_R1 2 GAGDGSDEEVDGKADGAEAK 20 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGKADGAEAK;GAGDGS(1)DEEVDGKADGAEAK 227.24 1.1505e-75 124849000.0 33934.0 29950.0 31199.0 29551.0 35900.0 27071.0 30964.0 29300.0 30960.0 29501.0 31881.0 True False 37378.95469910952 32473.991609534154 33316.35175482782 31376.298154809614 33378.50784827655 26850.54275136144 32142.35196415095 28715.58851459465 29658.858866300136 27638.30182532784 27959.8391103101 1.3368801784458821 1.1614513045448633 1.191578807853101 1.1221916560757215 1.1938018568915276 0.9603253668745323 1.1495900186456567 1.027029819495845 1.0607664353606217 0.988500030929588 1.0 14.771068438566605 -2.0000000000000604 0.24526331464588003 1.0112686884080397 2.787011467004003 0.7001904259328253 0.059078856426940704 17.022726790396067 0.20555418838234304 0.025739114479433983 12.589434337347095 0.009999999999998609 2.0000000000000604 1.7757427785959634 GAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_A549_MK2206_60min_R1 6 GAGDGSDEEVDGKADGAEAKPAE 23 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE 297.63 3.314499999999999e-157 3135857400.0 54776.0 61530.200000000004 57782.1 58789.1 72411.8 56498.200000000004 53495.479999999996 51958.33 86479.6 79701.79999999999 81305.90000000001 True False 64020.84965537656 64661.824363266736 65976.47064292603 73192.4321391429 61760.12014333147 62476.80202353007 63214.916259290854 59323.58239321214 66892.10867954379 61697.10802469591 61115.40110131637 1.0475403662858005 1.0580283070722412 1.0795391906788117 1.197610272045918 1.010549207407578 1.0222759058712023 1.0343532909895157 0.9706813883928574 1.0945213068085877 1.0095181723902162 1.0 15.899248365037788 GAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_A549_PD325901_60min_R1 5 GAGDGSDEEVDGKADGAEAKPAE 23 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE 211.19 8.1166e-74 4148715400.0 34758.64000000001 39648.12 38010.71000000001 43509.799999999996 44125.2 41421.5 39560.399999999994 41649.63 43684.189999999995 41591.82000000001 44526.899999999994 True False 38287.31154484164 42989.40621748924 40590.34535756764 46197.30152807464 41025.9981756761 41084.17703725456 41065.89267028154 40818.89545614733 41848.29541016278 38965.70538709558 39050.37357927503 0.9804595458508402 1.1008705494255437 1.0394355197439111 1.1830181709860172 1.0505916951700964 1.0520815365274487 1.0516133113788235 1.0452882191583155 1.0716490413390736 0.9978318211986482 1.0 15.253048729668034 -11.174977785733663 0.460184734379388 0.9708417275948827 1.069444587102368 0.22122469347230878 0.04677338289953164 2.9638069427265368 0.6263726983406496 0.14261110697535773 0.011200977874414965 6.6837810439373564e-12 11.174977785733663 0.09860285950748515 GAGDT(ph)DEEGEEDAFEDAPR ddPTM_A549_PD325901_60min_R1 2 GAGDTDEEGEEDAFEDAPR 19 0 Q9NZ56 Q9NZ56 FMN2 Formin-2 1 GAGDT(1)DEEGEEDAFEDAPR;GAGDT(1)DEEGEEDAFEDAPR 88.73 6.419400000000001e-06 15003600.0 351.95 366.07 248.43 507.61 524.36 319.66 510.08 361.02 207.36 543.14 509.68 True False 387.6797049081038 396.92000362277656 265.28995373094926 538.9639168340464 487.5307625437966 317.05679494293537 529.491373526486 353.8191728852887 198.64538031382426 508.84604770714753 446.99259112772035 0.8673067800296741 0.8879789318686125 0.5934996664299236 1.2057558168342142 1.0906909246835663 0.70931107413443 1.184564093535933 0.791554893544513 0.4444041898158997 1.1383769167703133 1.0 8.80410710880775 -8.507986444126367 24.58198488824251 0.7313376433815293 0.9314527647496919 0.0 0.24391120744998818 932.5013060835443 1539236.002956223 0.042299963460075786 0.050239506433929625 3.1046564939745865e-09 8.507986444126367 0.20011512136816256 GAGES(ph)GEEDPFPSRDPR ddPTM_A549_MK2206_60min_R1 2 GAGESGEEDPFPSRDPR 17 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 GAGES(1)GEEDPFPSRDPR;GAGES(0.999)GEEDPFPS(0.001)RDPR 75.97 0.0001271 7352100.0 591.56 885.09 679.93 632.0699999999999 1351.26 770.23 563.04 772.6700000000001 1328.65 1179.61 1036.74 True False 691.4008657465783 930.137300474949 776.3542980307865 786.9271783747008 1152.4914440032985 851.7352273627056 665.3370798921916 882.1983387026334 1027.712896418066 913.1352817252753 779.28884543162 0.8872202775642661 1.1935719418128967 0.9962343264400145 1.0098016710849367 1.4789015020033747 1.0929647361896475 0.8537746739127074 1.132055647754095 1.3187830192139514 1.171754590198866 1.0 9.606014355845788 GAGES(ph)GEEDPFPSRDPR ddPTM_A549_PD325901_60min_R1 2 GAGESGEEDPFPSRDPR 17 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 GAGES(0.988)GEEDPFPS(0.012)RDPR;GAGES(0.999)GEEDPFPS(0.001)RDPR 79.51100000000001 8.6247e-05 13550600.0 1830.04 1496.38 1524.02 1338.71 2032.2 1657.3899999999999 1587.69 1794.63 1863.35 1542.81 1999.56 True False 2015.8243135957564 1622.485194146067 1627.4491618767504 1421.3990762689978 1889.4652827094044 1643.8927653459036 1648.1104117673046 1758.8346967899997 1785.0398794741734 1445.3967133023975 1753.6267962551892 1.1495172849208743 0.9252169262073489 0.9280476127258737 0.8105482188709408 1.0774614568757124 0.9374245243380068 0.9398296235474896 1.002969788409901 1.0179132089484866 0.824232793653127 1.0 10.776126033311025 -8.359803235459365 6.415363847780343 1.0085008623766716 0.9609481091171312 0.0 0.0996541552281778 0.5275834046531491 29.28424377364959 0.0128900048539304 0.015599047891557524 4.367136480100763e-09 8.359803235459365 -0.04755275325954034 GAGGS(ph)PVGVEEGLVNVGTGQK ddPTM_A549_MK2206_60min_R1 4 GAGGSPVGVEEGLVNVGTGQK 21 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK 298.87 5.706499999999998e-145 48753300.0 11239.27 12314.66 12294.09 10610.2 17494.92 13957.109999999999 11878.91 11715.92 17533.5 18879.190000000002 19211.800000000003 True False 13136.18400223062 12941.423593834343 14037.576826845869 13209.699476309972 14921.440443380385 15434.042116220196 14037.154183898392 13376.687538500204 13562.190245246047 14614.36786683309 14440.979841294064 0.9096463083943672 0.8961596606366189 0.9720653986861292 0.9147370622689163 1.0332706372674547 1.0687669594334912 0.9720361317698866 0.9263005478512955 0.9391461240368806 1.0120066662681173 1.0 13.817881014033322 -5.908575225487293 1.5576427979216994 0.9766056186568005 0.8986170458742264 0.3056221084977997 0.044507542672172724 0.5068372789137046 2.1559939046496166 0.006912555594720755 0.04137073539227172 1.234311497750054e-06 5.908575225487293 -0.0779885727825741 GAGGS(ph)PVGVEEGLVNVGTGQK ddPTM_A549_PD325901_60min_R1 5 GAGGSPVGVEEGLVNVGTGQK 21 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK 282.72 1.7440999999999994e-127 64578600.0 11816.98 11545.22 12412.510000000002 11750.31 13494.67 11994.3 12730.86 13686.84 12304.68 14488.400000000001 15030.6 True False 13016.631110399112 12518.176207353108 13254.897571086189 12476.099961809783 12546.850933284173 11896.622397497493 13215.339843893895 13413.845239081738 11787.557090277334 13573.599951394182 13181.931486823722 0.9874600792311932 0.9496465840279867 1.0055353105374127 0.9464546204234586 0.9518218893661861 0.9024946313360082 1.0025344053034693 1.0175933058436717 0.8942207825962255 1.0297125246753074 1.0 13.686274156746881 -6.305363704528748 24.879269737967594 0.9541627648880578 0.9777573317760911 0.0 0.04487920646108364 1123.126314532303 636150.1855561526 0.00662049160791386 0.015384668356102681 4.950354444688758e-07 6.305363704528748 0.023594566888033297 GAGIGGLGITVEGPSESK ddPTM_A549_PD325901_60min_R1 1 GAGIGGLGITVEGPSESK 18 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 192.15 4.2047999999999997e-81 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GAGKPATGPTNSSS(ph)AK ddPTM_A549_MK2206_60min_R1 1 GAGKPATGPTNSSSAK 16 1 Q9BT25-3;Q9BT25;M0R1H1;M0R3B3 Q9BT25-3 HAUS8 HAUS augmin-like complex subunit 8 1 GAGKPATGPTNS(0.002)S(0.126)S(0.871)AK 90.97200000000001 2.7933e-06 7488500.0 1430.4 1831.6 1644.4 1262.0 1704.7 908.65 1410.9 1482.2 1973.7 1914.5 1998.1 True False 1671.8165500775995 1924.8206166038676 1877.6006466574856 1571.1900566533332 1453.9408882024345 1004.8027398869451 1667.242267014588 1692.306389047126 1526.660101351249 1482.013120322004 1501.9166252454033 1.113122074805208 1.281576210190339 1.250136402445574 1.046123353482828 0.9680569904903144 0.6690136609432411 1.1100764443180535 1.1267645357947977 1.016474600313984 0.9867479295529156 1.0 10.552589012505246 -6.3643486605559545 4.2080160188890465 0.997014610307433 1.221277698658965 0.4178181544192602 0.1187951526447461 0.17313723951478138 5.277979503966035 0.016780558084574588 0.04077234787371638 4.321667393670629e-07 6.3643486605559545 0.22426308835153208 GAGKPATGPTNSSS(ph)AK ddPTM_A549_PD325901_60min_R1 1 GAGKPATGPTNSSSAK 16 1 Q9BT25-3;Q9BT25;M0R1H1;M0R3B3 Q9BT25-3 HAUS8 HAUS augmin-like complex subunit 8 1 GAGKPATGPTNS(0.001)S(0.175)S(0.823)AK 101.92 3.2869999999999997e-07 13404000.0 1568.5 1663.4 1505.9 1447.8 2363.6 1811.5 1994.5 1501.1 1653.2 1584.1 2116.5 True False 1727.7329653313275 1803.5805557028073 1608.0994297123384 1537.2273178076318 2197.588889977337 1796.7477446009116 2070.4017889322777 1471.1593829098308 1583.721753157863 1484.079655655803 1856.1839175989262 0.9307983702209008 0.9716604796553974 0.866347032999026 0.8281654114297672 1.183928418483464 0.9679793729304053 1.1154076755553695 0.7925719908255937 0.8532138104108199 0.799532654918991 1.0 10.858123949794695 -2.7755895652284606 10.046221884621177 0.9419777239411347 0.14877993832715175 0.0 0.12166711213401364 0.0 0.0 0.01498124869650018 0.0 0.0016765265474084914 2.7755895652284606 -0.7931977856139829 GAGPQLLEELDNAPGSDAAELELAPART(ph)PPDSVKDASAAEPAAAER ddPTM_A549_PD325901_60min_R1 1 GAGPQLLEELDNAPGSDAAELELAPARTPPDSVKDASAAEPAAAER 46 2 Q9UHR6 Q9UHR6 ZNHIT2 Zinc finger HIT domain-containing protein 2 1 GAGPQLLEELDNAPGS(0.002)DAAELELAPART(0.998)PPDSVKDASAAEPAAAER 137.95 1.0136e-31 37903000.0 703.98 976.35 1490.3 789.9 1308.0 1181.7 1025.0 1223.5 1097.4 1372.7 909.94 True False 775.4475313573149 1058.6304410006228 1591.4407199019165 838.6903290069405 1216.1305923550342 1172.0766269913863 1064.0069359015222 1199.0963326828173 1051.2800943112977 1286.0274877335519 798.0231485849125 0.9717105734744291 1.3265660812945461 1.994228767328272 1.0509599007173422 1.5239289668620855 1.4687250978493052 1.333303348140042 1.5025833959943447 1.3173553877170991 1.6115165205595712 1.0 9.640286785676333 -10.111273622828584 0.6630442851639279 1.0014725307650776 1.4095929755812433 0.0 0.30955872723315614 0.7371024842666515 0.6256595616321574 0.14957770411644572 0.05308030470526456 7.739740096896526e-11 10.111273622828584 0.4081204448161657 GAGPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GAGPSPR 7 0 E7EMD6;O43572;I3NI04;I3L479;I3L177;J3QR74 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 GAGPS(1)PR 68.383 0.022811 14762000.0 1995.1 1809.2 1552.2 1835.5 2019.2 1144.4 938.76 1552.2 1180.9 1749.7 2290.9 True False 2197.6410832850074 1961.667633387952 1657.5416261368557 1948.8746662770466 1877.3783578618375 1135.0803858246106 974.485025509183 1521.2401533226564 1131.2708796903692 1639.22364339433 2009.1338232116134 1.093825138920843 0.9763747992914746 0.8250030968505944 0.9700073951080859 0.9344217573625017 0.564960070210842 0.4850274353310435 0.7571621838962146 0.5630639764363856 0.8158857436255891 1.0 10.972357946121939 -7.089315678247214 10.469763039046255 0.7458321346577708 0.9563475019347545 0.4198546151436241 0.14786865251941594 0.6755724537347615 76.2534105876726 0.029173214956896537 0.0505669207991754 8.141123101801887e-08 7.089315678247214 0.21051536727698372 GAGPS(ph)PRQS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GAGPSPRQSPR 11 1 E7EMD6;O43572;I3NI04;I3L479;I3L177;J3QR74 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 2 GAGPS(1)PRQS(1)PR 55.452 0.053712 1234400.0 391.8 434.98 334.55 248.73 502.09 505.29 492.98 455.01 451.2 502.5 412.61 True False 431.57524757208427 471.6372911624429 357.25457481257916 264.09348719318416 466.8249305164669 501.17508576836536 511.7406236690068 445.93446860156047 432.237633090266 470.7720642428137 361.86158575029197 1.192652839005407 1.3033637991292708 0.987268582465971 0.7298190733498466 1.290064900225708 1.3849911278347429 1.4141888606604989 1.232334368062169 1.194483333161918 1.3009727552779726 1.0 8.499294153000317 -4.115115222052918 16.31206000753818 1.1389232612077171 1.111137217088799 0.0 0.19927813909554581 0.0 0.0 0.027141751953520452 0.0 7.671579287780093e-05 4.115115222052918 -0.027786044118918163 GAGQQQS(ph)QEMMEVDR ddPTM_A549_MK2206_60min_R1 1 GAGQQQSQEMMEVDR 15 0 C9JRC4;B5MBZ8;Q15435-3;Q15435 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 GAGQQQS(1)QEMMEVDR 41.092 0.027284 2712100.0 200.94 150.13 140.53 193.91 0.0 201.08 299.65 220.12 214.12 385.58 321.82 True False 234.85375948866965 157.77097574292355 160.45926713377315 241.41795870495073 0.0 222.35815213389864 354.0925262675746 251.32268408922778 165.62216187937852 298.4772102030599 241.90321221984692 0.9708583748579139 0.6522070306347889 0.6633201174192935 0.9979940178948299 0.0 0.9192029741705732 1.4637776944680156 1.0389390111149919 0.684662929274612 1.2338703875159676 1.0 7.918286116690224 GAGQQQS(ph)QEMMEVDR ddPTM_A549_PD325901_60min_R1 2 GAGQQQSQEMMEVDR 15 0 C9JRC4;B5MBZ8;Q15435-3;Q15435 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 GAGQQQS(1)QEMMEVDR;GAGQQQS(1)QEMMEVDR 61.353 0.0014866 5987800.0 748.21 601.45 428.01 512.05 675.43 660.27 474.73 740.14 522.73 835.1199999999999 746.6700000000001 True False 824.1677283969094 652.1363022889587 457.05733243321464 543.6781655500748 627.9901269070037 654.8929800318208 492.7961099322236 725.3773270714025 500.76147594254127 782.3903806775289 654.834323531108 1.2585896902176619 0.9958798414420299 0.6979740004595255 0.8302530060097671 0.9590061246647084 1.0000895745665812 0.7525508242678627 1.1077264905112192 0.7647147651672423 1.1947913427301606 1.0 9.35498613328857 -5.34101391214217 3.6524741132372083 0.8900438739122546 1.2726925820795192 0.2696191768085576 0.1496455156382277 0.16833447611851038 3.7151815157444523 0.016865416618910344 0.14805243567392234 4.560223075483433e-06 5.34101391214217 0.3826487081672646 GAGS(ph)VFR ddPTM_A549_PD325901_60min_R1 2 GAGSVFR 7 0 P62917;E9PKZ0;G3V1A1;E9PKU4;E9PP36 P62917 RPL8 60S ribosomal protein L8 1 GAGS(1)VFR;GAGS(1)VFR 65.24600000000001 0.025169 8123800.0 3262.5 3292.7 2982.8 3149.8 3452.7 3247.9 2774.1000000000004 3939.8 3163.6 3375.8 3659.8999999999996 True False 3593.7065982744375 3570.187384731657 3185.2307450335093 3344.3559922851773 3210.1942631683683 3221.4501792378146 2879.669893545769 3861.2175982866906 3030.644893715346 3162.651411882367 3209.7555020176283 1.1196200445845363 1.112292628671394 0.9923593068167644 1.0419348109795092 1.000136696128557 1.0036434791412727 0.8971617594348323 1.2029631527571363 0.9441980524093829 0.9853247108368062 1.0 11.648247691211882 -2.000000121996988 0.4164900282734134 0.984323548426563 3.771034399983507 0.18811099847920165 0.07474107700985039 63.25417353754156 0.7170253961482915 0.015302656608574376 148.16955632818554 0.009999997190915934 2.000000121996988 2.786710851556944 GAGSGELK ddPTM_A549_PD325901_60min_R1 2 GAGSGELK 8 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315-2;Q14315 Q60FE5;Q14315-2 FLNA;FLNC Filamin-A;Filamin-C 0 ; 108.46 0.0048432 9781300.0 8983.7 8589.099999999999 8446.7 8643.2 9493.599999999999 9613.099999999999 8939.1 9477.4 9024.8 10885.400000000001 11683.7 False True 9895.718610549608 9312.93360044907 9019.943856133348 9177.07083386858 8826.802287142014 9534.814100813144 9279.282342163207 9288.365822123526 8645.519040587393 10198.093986286021 10246.67896907657 0.9657488675515135 0.9088733655611297 0.8802797358397405 0.8956141654836695 0.8614305487446616 0.9305272595724173 0.9055892519095341 0.9064757322987149 0.8437386461192631 0.995258465407458 1.0 13.322868775992479 -10.993550304890352 1.2679718272769103 1.000034128314857 0.8937616719699311 0.5847249046705094 0.03141220357925359 0.26225217181611876 0.7499747367803458 0.02396441317340673 0.005472089970543565 1.0149617954289102e-11 10.993550304890352 -0.10627245634492599 GAGTDDHTLIR ddPTM_A549_MK2206_60min_R1 2 GAGTDDHTLIR 11 0 P08758;D6RBL5;D6RBE9 P08758 ANXA5 Annexin A5;Annexin 0 ; 130.63 9.8738e-08 13170200.0 2167.3599999999997 2162.94 1968.53 2144.04 2877.6000000000004 2185.28 2125.85 2379.2 2980.2 3120.1 2656.12 False True 2533.157381135477 2273.024407336301 2247.69715456377 2669.329896249613 2454.30885193367 2416.5248791285358 2512.0894275518904 2716.4588859944147 2305.189458401475 2415.267242996441 1996.5320988172882 1.2687786901277853 1.1384862826311695 1.1258006600020443 1.3369832109540731 1.2292859470616881 1.21036114598911 1.2582264162143997 1.360588636468003 1.1545967429058768 1.2097312356897263 1.0 10.96328055144009 -9.729933001003076 0.9558230038768798 1.0237024507292702 1.2339726341517023 0.13346875141697911 0.09064421219624562 0.2480115958367431 0.4701316565302799 0.02438053084230655 0.015064772885650262 1.8623744246651273e-10 9.729933001003076 0.2102701834224321 GAGTDDHTLIR ddPTM_A549_PD325901_60min_R1 2 GAGTDDHTLIR 11 0 P08758;D6RBL5;D6RBE9 P08758 ANXA5 Annexin A5;Annexin 0 ; 192.21 2.9084e-19 16024000.0 3672.0 3518.7 3951.0 4045.3 4320.299999999999 4210.2 4289.3 4453.8 4453.7 4669.1 4922.9 False True 4044.778736816471 3815.2331978787247 4219.138619293078 4295.168993457115 4016.857032225883 4175.9135270873585 4452.531658695021 4364.965465061491 4266.5264771589445 4374.292229166411 4317.414508834278 0.9368520739762325 0.8836847122443323 0.9772373281879446 0.9948474914021703 0.9303848458392411 0.9672255278112905 1.031295848379688 1.01101375745366 0.9882133087820947 1.0131740235309232 1.0 12.075951895212592 -5.886332565655625 0.5941300285423977 0.9970739144434282 0.8880042605603161 0.5109457684885361 0.02903320250739345 1.2156428982538536 0.44033795030021505 0.0051566243680305195 0.07835463224601208 1.2991743403452823e-06 5.886332565655625 -0.10906965388311207 GAGTGGLGLAVEGPSEAK ddPTM_A549_PD325901_60min_R1 1 GAGTGGLGLAVEGPSEAK 18 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 121.18 7.6778e-10 3349200.0 4274.6 4123.9 3949.1 3657.5 4980.2 5156.2 4401.4 4494.3 4692.8 4461.0 5281.1 False True 4708.554245205799 4471.43552582831 4217.109673867451 3883.415468214818 4630.407932757293 5114.209616732664 4568.8976855384935 4404.657660789857 4495.577935651596 4179.331698680979 4631.558179651163 1.0166242250594884 0.9654279083600084 0.9105163986486019 0.8384684630059653 0.9997516501252377 1.1042093002743738 0.98647096901687 0.9510098955772167 0.9706404974902401 0.9023597537958068 1.0 12.177281920884804 GAIILAK ddPTM_A549_MK2206_60min_R1 2 GAIILAK 7 0 H0YEN5;P15880;I3L404;E9PM36;E9PMM9;E9PPT0 H0YEN5 RPS2 40S ribosomal protein S2 0 ; 123.34 0.01736 7592700.0 5143.6 5826.3 6460.2 5778.6 8284.3 6018.9 6776.2 6390.200000000001 8951.5 7625.4 7390.1 False True 6011.713931053657 6122.833783860623 7376.353501299371 7194.357259411212 7065.690444145855 6655.816002977533 8007.347827446482 7296.030419166742 6923.9995426081505 5902.816843929697 5554.934213615965 1.082229545818573 1.102233356581011 1.3278921437483162 1.2951291559451377 1.2719665386543737 1.198180886942485 1.4414838267245882 1.313432371761144 1.2464593236111428 1.0626258776316415 1.0 12.439554110722538 -10.428150230496488 0.8516326160799431 1.0052773862311015 1.2568774446061937 0.42675105778609845 0.09803045486910052 0.4078351919650636 0.5497406331350455 0.060473592240953104 0.019428537095879484 3.7312106598927605e-11 10.428150230496488 0.25160005837509214 GAIILAK ddPTM_A549_PD325901_60min_R1 2 GAIILAK 7 0 H0YEN5;P15880;I3L404;E9PM36;E9PMM9;E9PPT0 H0YEN5 RPS2 40S ribosomal protein S2 0 ; 109.88 0.023688999999999998 13155500.0 7463.7 7820.6 8882.0 8822.2 9792.1 9862.0 8036.5 9001.5 9553.7 8981.3 8391.7 False True 8221.409329514465 8479.669408398086 9484.785931804892 9367.127257330085 9104.336676911105 9781.68714173568 8342.33340524154 8821.958020959857 9152.191212886692 8414.219185241756 7359.574099369199 1.1171039544556165 1.152195669736499 1.2887683178049458 1.2727811597321856 1.2370738515550042 1.3291104905885904 1.1335348068520126 1.1987049660544897 1.2435762028228157 1.143302461750192 1.0 12.845406564190752 -10.771156458510633 0.7076864552848122 0.9763870928631599 1.224744186649794 0.2970024489609794 0.0755330711508748 0.47765152271622074 0.35809028188230846 0.07191739755484006 0.01267902238408358 1.6937275098855798e-11 10.771156458510633 0.24835709378663395 GAILSEEELAAMS(ph)PTAAAVAK ddPTM_A549_MK2206_60min_R1 6 GAILSEEELAAMSPTAAAVAK 21 0 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 GAILSEEELAAMS(0.983)PT(0.017)AAAVAK;GAILSEEELAAMS(0.835)PT(0.165)AAAVAK;GAILSEEELAAMS(0.5)PT(0.5)AAAVAK;GAILSEEELAAMS(0.997)PT(0.003)AAAVAK;GAILSEEELAAMS(0.888)PT(0.112)AAAVAK;GAILSEEELAAMS(0.932)PT(0.068)AAAVAK 155.1 2.2559e-27 25667700.0 4450.67 4994.94 4864.040000000001 4761.93 6841.42 5727.32 5560.08 5208.93 7778.31 7679.9 8039.79 True False 5201.834287565631 5249.161110886284 5553.834012021336 5928.603063771162 5835.0561807742715 6333.381200912674 6570.274565158738 5947.311779179095 6016.535204408695 5945.0052560778 6043.288256084153 0.8607622319403053 0.8685935352498912 0.9190086219087675 0.9810227168632027 0.9655432495545383 1.0480025000522633 1.087201915040878 0.9841185009157171 0.9955730968734573 0.9837368340145939 1.0 12.56111804280175 -6.114328248772292 1.376225859594746 1.0060701260824103 0.8545582200310055 0.7686869695948523 0.031327228520830926 0.18014654147771159 0.6024081920225168 0.004810750699993043 0.02411679752710261 7.685493351891676e-07 6.114328248772292 -0.15151190605140485 GAILSEEELAAMS(ph)PTAAAVAK ddPTM_A549_PD325901_60min_R1 5 GAILSEEELAAMSPTAAAVAK 21 0 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 GAILSEEELAAMS(0.862)PT(0.138)AAAVAK;GAILSEEELAAMS(0.999)PT(0.001)AAAVAK;GAILSEEELAAMS(0.995)PT(0.005)AAAVAK;GAILSEEELAAMS(0.995)PT(0.005)AAAVAK;GAILSEEELAAMS(0.983)PT(0.017)AAAVAK 282.19 1.9053999999999998e-127 32579500.0 6569.82 7067.58 8522.3 7948.6 9268.8 8628.48 8823.8 9613.400000000001 9146.8 8308.3 8820.1 True False 7236.783289954142 7663.189770274167 9100.674526753073 8439.566969419639 8617.791463624108 8558.212519643428 9159.594537568626 9421.653195433591 8762.391804853813 7783.712520096655 7735.283615220549 0.935555003531413 0.990679870508623 1.1765146540775666 1.0910481618040853 1.114088621995329 1.1063863906429519 1.184131700038185 1.2180100516152774 1.1327822276111823 1.006260779473013 1.0 12.917238473915063 -5.583041140203046 6.560366346338193 1.096142773949117 0.9485775727486262 0.4249071771355071 0.06632206449807226 0.1575300464872991 13.003802926233504 0.010752063590971033 0.04303156115296402 2.6119139191608165e-06 5.583041140203046 -0.14756520120049077 GAILSEEELAAMSPT(ph)AAAVAK ddPTM_A549_PD325901_60min_R1 1 GAILSEEELAAMSPTAAAVAK 21 0 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 GAILSEEELAAMS(0.34)PT(0.66)AAAVAK 208.2 5.6218999999999985e-67 12227000.0 2539.5 2272.7 2228.0 2499.4 3675.1 2483.8 2546.1 3085.4 3163.2 2506.2 2577.4 True False 2797.308170518909 2464.2284050413436 2379.2054780523863 2653.782261450752 3416.9736544067146 2463.5727563012656 2642.9932287793795 3023.859276550525 3030.2617043243104 2347.958104289231 2260.396139484749 1.2375300601763315 1.0901754617237391 1.0525612906924888 1.1740341505164995 1.5116702752755562 1.0898854025041957 1.1692610788929425 1.3377563444431495 1.3405887806086283 1.038737442200924 1.0 11.142359914996423 -4.865529946922607 17.551817235071596 1.1828712484689363 13.76954014079961 0.011676044354366089 0.1494451415127796 1141.731156769236 149042.62795991488 0.02229021618825577 64.76817596484774 1.3629190224262414e-05 4.865529946922607 12.586668892330673 GAKAS(ph)PVAVGSSGAGADPSFQPVLSAR ddPTM_A549_PD325901_60min_R1 1 GAKASPVAVGSSGAGADPSFQPVLSAR 27 1 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 GAKAS(1)PVAVGSSGAGADPSFQPVLSAR 84.713 3.6626e-07 2614500.0 856.78 745.65 844.3 1256.6 1195.1 870.87 1128.4 1579.3 1246.4 1158.6 927.45 True False 943.7596748719004 808.4885423589029 901.5992751883434 1334.2173280543375 1111.1602988711777 863.7779234560278 1171.341879484173 1547.7996225631184 1194.018142472756 1085.4457982720864 813.3795295899474 1.1602943528068406 0.9939868326493165 1.1084607398994546 1.640337972025141 1.3661031024856893 1.0619617190163217 1.4400926466328539 1.902924239245875 1.4679717143541853 1.334488708880216 1.0 9.667784872570481 -6.030512333296239 24.059403996491785 1.3134074284312882 1.0706611327744362 0.18572344576362587 0.24733789759134994 689.632682400546 543785.9523804622 0.04118746117133685 0.10916169910698477 9.321539982239016e-07 6.030512333296239 -0.24274629565685202 GAKEEHGGLIRS(ph)PR ddPTM_A549_MK2206_60min_R1 4 GAKEEHGGLIRSPR 14 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR 102.89 5.4488e-06 5210765000.0 29453.4 32546.7 29296.699999999997 24381.4 36089.1 29524.199999999997 27624.0 26125.8 39695.1 41418.600000000006 43080.7 True False 34424.41385350642 34203.188011804494 33451.41259117635 30354.844094522647 30780.441196941676 32648.43124742218 32642.92322915227 29829.212156906917 30704.223230049138 32062.10949353301 32382.57322316684 1.0630536868169211 1.0562220542540197 1.0330066224399008 0.9373820877460863 0.9505248698062394 1.0082099103867739 1.0080398183365853 0.9211501492280044 0.9481711974662658 0.990103821353994 1.0 14.98293001092184 -6.079328343735073 4.779776594293273 0.9720644423580493 1.0568459290918424 0.6265365739483526 0.027995714119248487 0.11606622572141649 4.7346399970009845 0.004354897573966584 0.012226061202907652 8.3305112700976e-07 6.079328343735073 0.08478148673379304 GAKEEHGGLIRS(ph)PR ddPTM_A549_PD325901_60min_R1 7 GAKEEHGGLIRSPR 14 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR 102.57 5.583099999999999e-06 8705808000.0 34654.00000000001 35551.4 37027.40000000001 35460.5 39944.700000000004 37526.5 35161.7 37137.799999999996 39257.100000000006 42279.0 42830.1 True False 38172.04856907353 38547.44124564917 39540.30202784423 37650.814548361326 37139.12207373403 37220.896625871406 36499.79773472052 36397.05744495952 37607.260607242635 39609.49672462071 37562.269222373616 1.016233826105924 1.0262277025235937 1.0526600987219488 1.0023572943760004 0.9887347820725502 0.990911821794332 0.9717143955983298 0.968979196370808 1.0011977813321837 1.054502231750889 1.0 15.19699660167251 -6.4347422053721335 6.519144469839842 0.9945350536710745 1.0309913961470252 0.31519536167898954 0.02256991498615901 0.14329293031024185 8.87089074978798 0.002122937681143475 0.004958972152449141 3.6750038181212395e-07 6.4347422053721335 0.03645634247595064 GAKEEHGGLIRS(ph)PRHEK ddPTM_A549_MK2206_60min_R1 2 GAKEEHGGLIRSPRHEK 17 3 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 GAKEEHGGLIRS(1)PRHEK;GAKEEHGGLIRS(1)PRHEK 44.415 0.012324 12861500.0 1166.6 1364.4 1582.48 1253.23 1583.28 1041.22 1171.5700000000002 549.6600000000001 2099.34 2416.0 2667.2 True False 1363.493559368378 1433.842132176412 1806.899459573425 1560.271406259633 1350.3816093583337 1151.4012092941016 1384.4291039522861 627.575988263152 1623.8428419571007 1870.2239220151266 2004.8606290248435 0.6800939375180289 0.7151829465940619 0.9012593860214083 0.7782443246534015 0.6735538569656855 0.5743048632034531 0.6905363315083239 0.3130272394886634 0.8099529804956724 0.9328448546195435 1.0 10.9692862336598 -9.428860853037895 1.7077665401578257 0.9458350337963374 0.6773964043828258 0.3788552456135801 0.14208535782540424 0.24523148438742137 1.4599105512848807 0.03362810716861497 0.02817154334803793 3.7251103882437304e-10 9.428860853037895 -0.2684386294135116 GAKEEHGGLIRSPR ddPTM_A549_MK2206_60min_R1 3 GAKEEHGGLIRSPR 14 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 0 ;; 69.92 0.00076779 19027600.0 1653.88 1976.98 1682.21 1586.5 2731.62 1806.0700000000002 1711.15 1966.71 2570.49 2554.96 2468.95 False True 1933.014510516178 2077.5998376356806 1920.7726732021954 1975.1925712206905 2329.802316555133 1997.1871286277621 2022.0438055156353 2245.4971652967715 1988.2781192290472 1977.7927615032163 1855.841575446493 1.04158379470032 1.1194920219070075 1.0349874141277824 1.064310982873354 1.2553885780873353 1.0761625103410366 1.089556259687283 1.2099616664512607 1.0713619877551734 1.0657120670590556 1.0 10.857857844226224 -9.679608210440307 1.1369274607413633 1.0137064593085117 1.109687177161256 0.14229577695875817 0.06709731100478708 0.4005593438186503 1.0628369037589511 0.0183492962578062 0.012550248896701612 2.0911817954931716e-10 9.679608210440307 0.09598071785274431 GAKEEHGGLIRSPR ddPTM_A549_PD325901_60min_R1 3 GAKEEHGGLIRSPR 14 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 0 ;; 58.32 0.0030649 33851100.0 2307.01 2315.41 2109.9 2342.75 2594.42 2454.92 2329.02 2677.88 2604.78 2600.26 2914.29 False True 2541.2159568690013 2510.537726632102 2253.090501859394 2487.4563467287126 2412.196889463109 2434.927945446132 2417.6521305886454 2624.467582643781 2495.3101549664498 2436.0791398368538 2555.8508052064144 0.9942739817568377 0.9822708436337493 0.8815422626663965 0.9732400426744869 0.9437940917949225 0.9526878253167378 0.9459285047717768 1.0268469416515198 0.9763129169681424 0.9531382406494233 1.0 11.319587907773686 -8.22777543805143 24.92176101405493 0.9913543375029492 0.9521056777032686 0.22203835292375718 0.0319697681231587 590.7643872179616 437349.5715085124 0.004676123679109964 0.006036666490588218 5.91867593816439e-09 8.22777543805143 -0.03924865979968062 GAKLT(ph)PEEEEILNK ddPTM_A549_MK2206_60min_R1 2 GAKLTPEEEEILNK 14 1 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 1 GAKLT(1)PEEEEILNK;GAKLT(1)PEEEEILNK 113.88 1.7804e-06 46238000.0 4258.1 5381.200000000001 4902.7 4446.0 6975.1 5172.5 4943.4 5592.9 7505.0 7051.1 6429.0 True False 4976.763179450106 5655.080095036436 5597.976581347394 5535.2701995885245 5949.0720298591 5719.850516772384 5841.551791593956 6385.7107025378955 5805.129483022306 5458.251612798371 4832.501868626548 1.0298523031641493 1.170217880669682 1.1584013278278158 1.1454253614518957 1.2310542637306614 1.1836209632750812 1.2088048696925164 1.321408842900828 1.2012679230835333 1.1294877397222132 1.0 12.23855457495845 -10.603767709895228 0.9734291694691198 1.0040337745288914 1.1861081163874365 0.20944479133958693 0.07558737631903456 0.34439278579548743 0.6007511729042639 0.04117886724913714 0.012303168091876595 2.4901888838267066e-11 10.603767709895228 0.1820743418585451 GAKLT(ph)PEEEEILNK ddPTM_A549_PD325901_60min_R1 2 GAKLTPEEEEILNK 14 1 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 1 GAKLT(1)PEEEEILNK;GAKLT(1)PEEEEILNK 144.3 1.9562e-13 82020000.0 8763.4 8841.2 9236.6 8297.7 11821.6 10061.7 10277.2 10399.599999999999 9711.900000000001 9797.7 9614.6 True False 9653.053916725898 9586.278952194094 9863.45122018792 8810.230083556007 10991.291598306021 9979.760851145998 10668.304469899631 10192.171819671627 9303.742617042004 9179.071549914059 8432.065151971006 1.144803051535896 1.1368838806888593 1.1697551006092886 1.0448484356761172 1.3035112277016494 1.1835488307171365 1.265206598576376 1.2087396902156518 1.1033765097115316 1.088591155841394 1.0 13.041670298940623 -9.427164543964901 1.1132502183404889 1.0234784557613088 1.1807313938496757 0.35287902558156015 0.06924503141958578 0.2577966585026595 0.6667552034738999 0.017760484757368186 0.013750534240589822 3.739688734168756e-10 9.427164543964901 0.15725293808836693 GALALEEK ddPTM_A549_MK2206_60min_R1 2 GALALEEK 8 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 141.78 0.002877 4218200.0 3242.7 3551.6000000000004 3383.3 2906.8 4667.9 3225.2 3314.5 3486.6000000000004 4838.0 4773.6 4861.9 False True 3789.9884835966386 3732.361269889878 3863.102814300825 3618.9661304912097 3981.2580935297397 3566.4885232855095 3916.7017464170717 3980.8362272646805 3742.200724698455 3695.2404445908164 3654.556048386282 1.0370585191244115 1.0212899242680795 1.0570648700289136 0.9902614934826933 1.0893958228627298 0.9759019908479281 1.0717312019736416 1.0892803871546783 1.0239823045950749 1.0111325139540546 1.0 11.835480444412232 -9.430969800236063 1.8261555118903392 1.0070104155613337 1.0400761638205966 0.12648107260154806 0.03487319178394509 0.41595651512816395 2.8235933088376144 0.007227694065582579 0.006097625834261965 3.707064988992263e-10 9.430969800236063 0.033065748259262895 GALALEEK ddPTM_A549_PD325901_60min_R1 1 GALALEEK 8 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 98.29899999999999 0.006753699999999999 2970700.0 1402.2 1184.5 1311.2 1569.5 1874.4 1728.0 1532.4 1624.5 1810.0 1784.4 1764.5 False True 1544.550311754918 1284.3219720031111 1400.1859168861265 1666.4444504068788 1742.7486103289577 1713.9277409165736 1590.7163205614556 1592.0980731044028 1733.93199444455 1671.73267947239 1547.477686087079 0.9981082930251725 0.8299453901985636 0.9048181627914832 1.0768778544526976 1.1261865847872978 1.107562167988591 1.0279413621683353 1.0288342684476117 1.120489174114643 1.080295176145318 1.0 10.595702891255998 -6.258025412919715 24.186731393029937 1.0635988625498976 0.9028560732880614 0.6446742014799438 0.05262150882439286 99.56118323085904 705347.0309129494 0.008314523384977986 0.021059688740058747 5.520451351881405e-07 6.258025412919715 -0.16074278926183616 GALDLETCEKQDIMPEVDKQS(ph)GSPESR ddPTM_A549_MK2206_60min_R1 1 GALDLETCEKQDIMPEVDKQSGSPESR 27 2 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 GALDLETCEKQDIMPEVDKQS(0.497)GS(0.497)PES(0.007)R 56.728 0.00073394 4644300.0 1195.7 1853.0 1987.4 1451.8 1990.4 1326.1 1285.3 1444.3 2358.5 2142.2 2081.2 True False 1397.5049279416864 1947.3097851970779 2269.243204309834 1807.491065173779 1697.614796666936 1466.4270218060624 1518.8223728073203 1649.0339479832435 1824.303515750581 1658.275532177485 1564.38060180208 0.8933279576158372 1.244780063722271 1.450569766523435 1.1554036550259246 1.0851673785211715 0.9373850712012278 0.9708777845095502 1.0541130119381739 1.1661506884252362 1.0600205156387412 1.0 10.611375836650076 -6.688743173571605 4.0405824406231625 1.0592519618527236 1.2144774814523898 0.20588327759981162 0.13446277374722268 0.2777486420470074 8.834845833931391 0.020124237445107603 0.04280206607119466 2.0476551897585035e-07 6.688743173571605 0.15522551959966613 GALDLETCEKQDIMPEVDKQSGS(ph)PESR ddPTM_A549_PD325901_60min_R1 2 GALDLETCEKQDIMPEVDKQSGSPESR 27 2 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 GALDLETCEKQDIMPEVDKQS(0.249)GS(0.741)PES(0.01)R;GALDLETCEKQDIMPEVDKQS(0.215)GS(0.782)PES(0.003)R 171.48 5.0868e-49 29174000.0 5153.9 5397.4 5926.9 5495.8 5843.5 7250.8 6146.5 6760.8 6273.5 5560.0 6780.7 True False 5677.120133899352 5852.257840176946 6329.135075345013 5835.263084132602 5433.072718980616 7191.751888795081 6380.408420993856 6625.950540255003 6009.846611683912 5208.940651124465 5946.716886398792 0.954664606092808 0.9841157653834353 1.0643074483368933 0.9812579269544335 0.9136255891729145 1.2093651045073135 1.0729295749032537 1.114219941327582 1.0106158955422124 0.8759355373110576 1.0 12.53787767762674 -5.55806350719161 7.410310059854798 1.0258349973813232 0.9617142493236517 0.0650269827356369 0.08696534924492547 0.32870048635751903 55.29118157970244 0.010257115099370663 0.0410205251432718 2.7665370631446025e-06 5.55806350719161 -0.06412074805767154 GALHT(ph)VSHEDIR ddPTM_A549_MK2206_60min_R1 1 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.73)VS(0.27)HEDIR 126.09 2.1441999999999997e-06 296820000.0 1219.6 1697.9 1363.8 1380.7 1945.9 1315.3 1525.0 1153.0 2246.3 1649.0 1974.6 True False 1425.4386636427864 1784.3158576827395 1557.2073473069074 1718.971561981978 1659.660687718144 1454.4841729745215 1802.0727600802636 1316.4412809144085 1737.516636603997 1276.4897547197625 1484.25232381241 0.9603748909629083 1.2021647728329605 1.0491527096330273 1.1581397141199514 1.1181796121128413 0.9799440092763831 1.214128306332382 0.886939006120626 1.170634270688598 0.8600220691863266 1.0 10.535520656518889 GALHT(ph)VSHEDIR ddPTM_A549_PD325901_60min_R1 2 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.5)VS(0.5)HEDIR;GALHT(0.5)VS(0.5)HEDIR 173.06 7.8097e-16 645900000.0 7282.2 6776.6 6897.700000000001 6567.6 7897.6 7310.700000000001 7113.0 7698.6 7746.9 7767.7 8232.7 True False 8021.4835831277 7347.687864479765 7365.8194012396525 6973.265735898194 7342.899821240916 7251.164083054863 7383.689107382953 7545.045383565139 7421.32473357043 7277.246096356029 7220.130091385158 1.1109887885120924 1.0176669632652193 1.0201782111970983 0.9658088770752877 1.0170038113305249 1.0042982593494727 1.0226531951540525 1.0450013071880324 1.0278657918401404 1.007910661476726 1.0 12.817809116304367 -5.258868714334871 4.759035605591446 1.0131676820935693 1.116748535546503 0.6919992485233809 0.018844483577600303 0.08363218357816238 5.280995372481048 0.0027172463153358937 0.028653414530000986 5.50974228767429e-06 5.258868714334871 0.10358085345293366 GALHTVS(ph)HEDIR ddPTM_A549_MK2206_60min_R1 4 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.017)VS(0.983)HEDIR;GALHT(0.102)VS(0.898)HEDIR;GALHT(0.007)VS(0.993)HEDIR;GALHT(0.001)VS(0.999)HEDIR 153.81 3.3038e-13 526877000.0 3603.49 3478.7699999999995 3245.88 3646.59 4690.61 3189.49 3526.36 3560.5099999999998 5399.6900000000005 4523.87 4971.69 True False 4211.67101512803 3655.824533971958 3706.194591931768 4540.004713701646 4000.627482613496 3526.9997147878867 4167.053966056815 4065.2231961045622 4176.668836533076 3501.9246250358324 3737.082161336432 1.126994492843015 0.9782563979445892 0.9917348433694544 1.214852796299795 1.0705216823980173 0.9437843650530239 1.115055486113963 1.0878067488488887 1.1176283143422894 0.9370745608074873 1.0 11.867696566991825 -11.054867036595828 1.387922620720485 1.0003504953118116 1.0747188705850765 0.1891587122606896 0.07618181195155699 0.7526118322955002 2.6057506942696946 0.05131922920083888 0.011651470752864641 8.81318655832768e-12 11.054867036595828 0.0743683752732649 GALHTVS(ph)HEDIR ddPTM_A549_PD325901_60min_R1 2 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.016)VS(0.984)HEDIR;GALHT(0.023)VS(0.977)HEDIR 142.38 1.2347e-11 114701000.0 1600.32 1284.54 1642.06 1422.57 1593.3899999999999 1437.6399999999999 1406.5500000000002 1230.31 1308.26 1646.12 1635.62 True False 1762.7833083066826 1392.7926938935218 1753.5000661089334 1510.4389180091187 1481.4757832970856 1425.932336488022 1460.0770299436927 1205.7705018904767 1253.2783817967004 1542.183702271404 1434.4491090494478 1.2288921908667843 0.9709599909169799 1.2224205481021966 1.0529749075657528 1.0327837871353975 0.9940626875448586 1.0178660370260382 0.8405808852218485 0.8737001360941957 1.0751052041806821 1.0 10.486281070179357 -7.10618985450848 1.0594796187468178 0.9343303865684414 1.1258173971445957 0.3875994155697141 0.08992442606652085 0.3235202222795784 0.7123727656580671 0.013553846580745356 0.03321987230651407 7.830872365190705e-08 7.10618985450848 0.19148701057615436 GALHTVS(ph)HEDIRDIR ddPTM_A549_MK2206_60min_R1 4 GALHTVSHEDIRDIR 15 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHTVS(1)HEDIRDIR;GALHT(0.003)VS(0.997)HEDIRDIR;GALHTVS(1)HEDIRDIR;GALHT(0.002)VS(0.998)HEDIRDIR 202.63 3.9023e-39 187129100.0 3327.1 3960.04 3609.6299999999997 2553.87 4065.01 2875.51 2922.67 2431.56 4841.08 6005.320000000001 5929.889999999999 True False 3888.6331402147557 4161.589121301587 4121.529811599528 3179.568264647581 3467.0524138861865 3179.7945595909428 3453.6813073467447 2776.24107634019 3744.5831096162074 4648.714041124122 4457.334656361779 0.8724122014631911 0.9336496902609531 0.9246624113621423 0.7133339786613303 0.777830852107503 0.7133847477780352 0.7748310534452334 0.6228477981516981 0.8400946750255135 1.042935834869207 1.0 12.12196556711782 -10.017645374566019 1.0020119170867756 0.9806502517051777 0.7962104119216477 0.454574142348535 0.09209755262292262 0.3726211967476055 0.755173512936882 0.03585277104309081 0.018748536120622692 9.6018435506006e-11 10.017645374566019 -0.18443983978353007 GALHTVS(ph)HEDIRDIR ddPTM_A549_PD325901_60min_R1 4 GALHTVSHEDIRDIR 15 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.012)VS(0.988)HEDIRDIR;GALHT(0.002)VS(0.998)HEDIRDIR;GALHT(0.001)VS(0.999)HEDIRDIR;GALHTVS(1)HEDIRDIR 221.85 2.5264999999999998e-54 377715000.0 4877.780000000001 5123.9 5107.3099999999995 5293.09 5737.43 7265.279999999999 6597.820000000001 7724.76 6526.59 5800.0199999999995 6942.69 True False 5372.96863476815 5555.70903532861 5453.9227693499715 5620.0321478204205 5334.452709858975 7206.113968475908 6848.903650565637 7570.6836018430095 6252.3001191280955 5433.805747362394 6088.7831433380015 0.8824371813351483 0.9124498121447058 0.8957327993061047 0.9230140104381183 0.8761114633710725 1.1835064246557092 1.1248394776646489 1.2433820393367792 1.0268554441734397 0.892428851454129 1.0 12.571938215833823 -7.230828354798304 24.91433257951143 1.0522250781818967 0.9000240039616679 0.486246194288775 0.09022044438892644 516.8863799269851 420694.50952388596 0.01316938316649527 0.022808375635208395 5.8772159047560244e-08 7.230828354798304 -0.15220107422022877 GALPPS(ph)PALPR ddPTM_A549_MK2206_60min_R1 2 GALPPSPALPR 11 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 GALPPS(1)PALPR;GALPPS(1)PALPR 87.667 0.00030694 6408200.0 5820.6 6528.9 6374.700000000001 5310.9 6955.7 6382.6 5639.4 6435.0 8445.7 8734.1 10477.3 True False 6802.974979992786 6861.193122813381 7278.728315645514 6612.070738415363 5932.525744160073 7058.002495573011 6664.00598242403 7347.180956360993 6532.762435011523 6761.0607439041105 7875.497251230499 0.8638152948285089 0.8712076080962837 0.9242246023904404 0.8395750169784221 0.7532890374932392 0.8961976965289704 0.8461695521997444 0.9329164523818531 0.8295047571746429 0.8584931882044318 1.0 12.943155301398377 -10.87567655195231 0.8505711920036677 1.010785800018403 0.8599809554072642 0.0 0.062321416173790396 0.45000152371595636 0.5061120020250407 0.04678004548044296 0.008480850341370806 1.3314456651399935e-11 10.87567655195231 -0.15080484461113874 GALPPS(ph)PALPR ddPTM_A549_PD325901_60min_R1 2 GALPPSPALPR 11 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 GALPPS(1)PALPR;GALPPS(1)PALPR 81.92 0.00074262 8761200.0 4525.5 4864.700000000001 4558.5 4620.5 5828.4 4579.5 4879.0 4566.6 5464.4 5253.9 5626.8 True False 4984.925428502983 5274.665341666133 4867.867222487347 4905.897791083138 5419.033290888438 4542.206070328383 5064.673014891241 4475.515580571602 5234.750270962872 4922.167857363816 4934.739271224018 1.010169971404896 1.0688843020388794 0.9864487169308778 0.9941554196573134 1.0981397380989282 0.9204551285648227 1.0263304171762238 0.9069406375063642 1.0607957144743816 0.9974524664487323 1.0 12.268758146030889 GALPPS(ph)PALPRPSR ddPTM_A549_MK2206_60min_R1 2 GALPPSPALPRPSR 14 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 GALPPS(1)PALPRPSR;GALPPS(1)PALPRPSR 153.23 1.0895999999999999e-14 70111000.0 16902.0 17765.3 16864.2 14097.0 21823.0 18095.0 16489.6 16889.1 26188.0 24136.0 24854.0 True False 19754.644385774325 18669.477888268553 19255.797145074906 17550.765632838385 18612.865608753295 20009.800889511123 19485.54687516034 19283.181645699515 20256.459813642665 18683.66083682 18682.065864495897 1.057412201041256 0.9993261999867334 1.0307102696639856 0.9394445860611446 0.9962958991663704 1.0710700323318367 1.0430081456993152 1.0321760872466466 1.08427301137712 1.0000853745156275 1.0 14.189366376763521 -7.238395166018365 24.414962135093667 1.042309609865841 1.0021693581386422 0.17510917844343765 0.03581212178705924 778.2930351478348 824588.1808953058 0.0058573678319098575 0.010140354592015215 5.775702750936786e-08 7.238395166018365 -0.04014025172719893 GALPPS(ph)PALPRPSR ddPTM_A549_PD325901_60min_R1 4 GALPPSPALPRPSR 14 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 GALPPS(1)PALPRPSR;GALPPS(1)PALPRPSR;GALPPS(1)PALPRPSR;GALPPS(0.999)PALPRPS(0.001)R 160.81 9.6658e-20 125728600.0 24808.15 23113.239999999998 25235.16 24870.12 27745.43 27142.84 26054.57 26567.19 26842.05 29319.91 30870.24 True False 27326.655125205223 25061.07385072282 26947.76970894457 26406.290828259393 25796.68671333726 26921.797710219937 27046.090918957772 26037.286553892645 25713.971984243282 27468.645878832842 27073.396182574576 1.0093545316931334 0.9256715958987458 0.9953597815071733 0.9753593767912813 0.9528426555491013 0.9944004634168426 0.9989914355985239 0.9617296026809962 0.949787452258898 1.0145991915307864 1.0 14.724588255223138 -7.266575394551729 24.248637878504397 0.9775470755164076 0.9706752551827251 0.013054978954398444 0.02715672353185749 1450.7751982345255 6849526.898127965 0.0040306246147659 0.0065783552811281435 5.412832716663842e-08 7.266575394551729 -0.006871820333682499 GALQNIIPAS(ph)TGAAK ddPTM_A549_MK2206_60min_R1 4 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 GALQNIIPAS(0.909)T(0.091)GAAK;GALQNIIPAS(0.972)T(0.028)GAAK;GALQNIIPAS(0.919)T(0.081)GAAK;GALQNIIPAS(0.797)T(0.203)GAAK 156.24 1.8751999999999998e-19 50029800.0 9578.400000000001 10900.2 10951.4 10841.5 15445.2 11897.400000000001 10733.2 10638.599999999999 17494.5 14110.400000000001 15191.5 True False 11194.99975060353 11454.973621481477 12504.473194967642 13497.667986693432 13173.231540132716 13156.374971145044 12683.283507208846 12146.654129346083 13532.023682975845 10922.850839901586 11419.03128592941 0.9803808633397886 1.0031475818440356 1.09505551581908 1.1820326653562399 1.1536207590888066 1.1521445770409962 1.1107144896640448 1.0637201900228834 1.1850413002765021 0.9565479388221644 1.0 13.479152646864586 -5.742599061491577 4.326533238012825 1.1046876796612495 0.9870204883992177 0.27047534024172804 0.06860797430116365 0.20001773785909394 8.56840412959748 0.010130678655058544 0.04002780517778 1.8088432705417068e-06 5.742599061491577 -0.11766719126203173 GALQNIIPAS(ph)TGAAK ddPTM_A549_PD325901_60min_R1 3 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 GALQNIIPAS(0.989)T(0.011)GAAK;GALQNIIPAS(0.5)T(0.5)GAAK;GALQNIIPAS(0.904)T(0.096)GAAK 218.28 6.0886e-46 93391300.0 12292.94 12779.7 13314.560000000001 13001.43 14766.11 12948.02 13741.52 14861.01 14757.779999999999 14367.54 14740.330000000002 True False 13540.910219215875 13856.690169361056 14218.166108553494 13804.498802710103 13728.989373914055 12842.575618022345 14264.461063248276 14564.595497313187 14137.561828162376 13460.37107242029 12927.362856650585 1.0474611387773993 1.0718883907735577 1.0998504695982017 1.0678511120779957 1.0620100577474754 0.9934412579295228 1.1034316295925592 1.1266486180373838 1.0936153015066947 1.0412310091145538 1.0 13.65814037923986 -10.801305052496668 1.08907560151197 1.0006883754882963 1.0751011896974714 0.2309291616436866 0.03506718213127469 0.41677606236864384 0.8903719307375716 0.023021657049514574 0.0059740481618178335 1.580137745878199e-11 10.801305052496668 0.07441281420917512 GALQNIIPAST(ph)GAAK ddPTM_A549_PD325901_60min_R1 1 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 GALQNIIPAS(0.146)T(0.854)GAAK 125.61 7.8381e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GALQNIIPASTGAAK ddPTM_A549_MK2206_60min_R1 2 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 143.17 4.5494e-13 61339000.0 2691.7 3269.0 3329.7 2927.8 4625.4 3026.1 2915.9 3348.8 4356.6 4374.2 4825.4 False True 3145.9931542532713 3435.3781369720723 3801.9015283236636 3645.111131433935 3945.009787230327 3346.3198934373895 3445.6812859790457 3823.502655269881 3369.8370560606245 3386.065181986161 3627.1200057350347 0.867352927192641 0.9471366074296441 1.0481874110347251 1.0049601683072116 1.0876424769493869 0.9225831756728046 0.949977194173585 1.054142859686014 0.9290668769526218 0.9335409847571271 1.0 11.824608763307664 -5.481514567613539 0.0024758654813299957 1.1517830711188575 0.79728314124163 0.0004366693392613419 0.06420341020318464 2718367.7050000494 1054.0418761770068 74119.0224086939 76819.33943438384 3.299783392057419e-06 5.481514567613539 -0.35449992987722745 GALQNIIPASTGAAK ddPTM_A549_PD325901_60min_R1 2 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 184.31 7.586500000000001e-33 113691000.0 10729.5 10846.5 11406.7 10117.8 13839.4 12185.900000000001 11410.2 13484.3 13272.8 12084.8 13146.5 False True 11818.75094135957 11760.57262079506 12180.827256059325 10742.75352680899 12867.36828733811 12086.662070622275 11844.421404901022 13215.345058271292 12714.990373405313 11321.763665595126 11529.563842529784 1.0250822236451864 1.0200362113797523 1.0564863877267574 0.9317571482783729 1.1160325284702868 1.0483191069238447 1.0273087140737973 1.1462137890700659 1.1028162510799218 0.9819767530001323 1.0 13.493050317160025 -6.781331935625121 24.999967178302796 1.0593491535126016 1.0126148248433975 0.17563480374005824 0.053917556721802054 372.1248751024258 467667.36927924945 0.008089868453533499 0.015304258736416604 1.6545049253941512e-07 6.781331935625121 -0.04673432866920413 GALS(ph)PSGSAK ddPTM_A549_PD325901_60min_R1 1 GALSPSGSAK 10 0 Q13207 Q13207 TBX2 T-box transcription factor TBX2 1 GALS(0.431)PS(0.431)GS(0.138)AK 61.343999999999994 0.0075658999999999995 4301600.0 4039.7 4532.7 4096.1 4648.7 5252.4 5123.3 4101.0 4749.7 4431.6 4284.3 4936.2 True False 4449.807370130039 4914.686536512035 4374.085977850262 4935.839641036291 4883.489543796318 5081.577543424704 4257.06579915331 4654.963507432431 4245.355263304128 4013.7885668367885 4329.078693149925 1.0278878453217188 1.1352730880796278 1.0103965041734062 1.1401593712875833 1.1280667065543666 1.173824248440087 0.9833653072394909 1.0752780989632196 0.980660219926638 0.9271692319171668 1.0 12.079844310480379 -8.148443486462346 1.643194673536918 0.993244899097006 1.0996571881428854 0.4214856850194073 0.05903428583456827 0.2471646983799074 1.310957389682714 0.009085732996919003 0.012244841250340649 7.104876177730302e-09 8.148443486462346 0.1064122890458794 GALSS(ph)SLR ddPTM_A549_MK2206_60min_R1 1 GALSSSLR 8 0 A0A1W2PPE7;A0A1W2PQS2;A0A1W2PPU7;A0A1W2PRJ5;A0A1W2PR28;Q5JU85-3;Q5JU85 A0A1W2PPE7;A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 GALS(0.065)S(0.472)S(0.463)LR 50.04 0.032126 4587400.0 2238.8 2995.9 2145.7 2344.8 3009.4 2949.5 2605.8 2510.4 3802.7 3105.3 3417.1 True False 2616.6547065951713 3148.3785134764835 2449.992524649093 2919.2761052620717 2566.721246528073 3261.6141322803546 3079.24012997846 2866.2568877775634 2941.394521664081 2403.8105732754875 2568.539762837732 1.0187324114867047 1.2257464568109873 0.9538464461777818 1.136550871237767 0.9992920038319167 1.269832057681253 1.1988290679901739 1.1159090971637957 1.1451621517489836 0.935866599401891 1.0 11.326732692473794 -10.76461374357877 0.9985648240649203 0.9995656967068487 1.1213047359938344 0.25557513425170375 0.09458120564145901 0.7096203885825226 1.2489949283644652 0.06123832885316075 0.015324345197125035 1.719436954383236e-11 10.76461374357877 0.1217390392869857 GALSS(ph)SLRDLSDAGVCY ddPTM_A549_MK2206_60min_R1 1 GALSSSLRDLSDAGVCY 17 1 A0A1W2PR28;Q5JU85-3 A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 GALS(0.135)S(0.496)S(0.369)LRDLSDAGVCY 132.84 2.9666e-12 9158400.0 3204.6 3173.0 2990.7 2756.7 3871.4 3273.1 2873.3 2340.7 4218.9 4761.3 4350.3 True False 3745.458135052209 3334.492147021222 3414.826230818864 3432.091623752967 3301.9221884125686 3619.4572694920626 3395.341417402375 2672.5013930931095 3263.3258861989066 3685.7190231335385 3270.0004478279784 1.1453998844373376 1.0197222294682193 1.0442892242070128 1.0495691601610189 1.0097619988418636 1.1068675149253275 1.038330566485901 0.8172786015574574 0.9979588499342545 1.1271310453739207 1.0 11.67507511796317 -8.017960073349842 24.995777399860774 0.9826358180056093 1.0581404578512088 0.1834734084923011 0.07557565919634589 797.6098166262414 1110065.2080139902 0.00973859857010734 0.012705854617962167 9.594888375969027e-09 8.017960073349842 0.07550463984559952 GALSS(ph)SLRDLSDAGVPGK ddPTM_A549_MK2206_60min_R1 1 GALSSSLRDLSDAGVPGK 18 1 A0A1W2PPE7 A0A1W2PPE7 1 GALS(0.08)S(0.413)S(0.413)LRDLS(0.093)DAGVPGK 40.137 0.029264 2976400.0 1332.1 1260.1 1600.5 1311.7 2047.3 1169.5 862.74 1379.1 1997.4 1738.5 1756.8 True False 1556.9259132818595 1324.2337076777312 1827.4749665381335 1633.0665588844504 1746.1448820419103 1293.2557137487297 1019.4886905125558 1574.5916483166177 1544.9920891923723 1345.771642559312 1320.5380747866107 1.179008726070581 1.0027985810948448 1.3838866151840719 1.2366675297479341 1.3222980203157524 0.979339966367657 0.772025214553013 1.1923864054969109 1.169971634056846 1.0191085499573944 1.0 10.366910183678582 -7.265756834196616 24.974302472469407 1.0594824128403841 1.2220739520181043 0.3301836255824242 0.13832487838858984 434.7210317158315 2514643.4436746365 0.02199216350541461 0.03592461682061675 5.4230444706950466e-08 7.265756834196616 0.16259153917772018 GALSSS(ph)LR ddPTM_A549_MK2206_60min_R1 3 GALSSSLR 8 0 A0A1W2PPE7;A0A1W2PQS2;A0A1W2PPU7;A0A1W2PRJ5;A0A1W2PR28;Q5JU85-3;Q5JU85 A0A1W2PPE7;A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 GALS(0.018)S(0.091)S(0.891)LR;GALS(0.054)S(0.208)S(0.739)LR;GALS(0.042)S(0.355)S(0.603)LR 83.62299999999999 0.0033155999999999997 57206500.0 4653.5 5038.889999999999 4160.9 4381.67 6900.2 6076.9 5657.8 5332.7 8252.1 6959.5 7002.6 True False 5438.897032848231 5295.34797816066 4750.978186984392 5455.179346700643 5885.18972063967 6719.953524480252 6685.749024250571 6088.626555708816 6383.012525895855 5387.3441164173355 5263.661158071903 1.0332916328604476 1.0060199201918925 0.9025995489277832 1.0363849767067632 1.1180791361569018 1.2766690945094563 1.2701708608271403 1.1567284391723842 1.2126564256719699 1.0234975152524328 1.0 12.361850904946602 -6.659934141565596 3.6103536625900015 1.134732791164596 0.9816980862293645 0.42240725938955637 0.08820946393786093 0.23473373587009488 5.908582366310497 0.015772495405369985 0.03420477701551387 2.1880934114500447e-07 6.659934141565596 -0.1530347049352314 GALSSS(ph)LR ddPTM_A549_PD325901_60min_R1 2 GALSSSLR 8 0 A0A1W2PPE7;A0A1W2PQS2;A0A1W2PPU7;A0A1W2PRJ5;A0A1W2PR28;Q5JU85-3;Q5JU85 A0A1W2PPE7;A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 GALSS(0.004)S(0.996)LR;GALS(0.019)S(0.098)S(0.883)LR 96.311 0.0024881 63435000.0 4887.8 4085.6000000000004 5285.799999999999 4150.9 5265.0 4258.3 4358.3 4247.7 4803.1 5067.799999999999 5572.5 True False 5384.005857791822 4429.907850414447 5644.526174097535 4407.291665622114 4895.204563263954 4223.621816634864 4524.157491453269 4162.976291243815 4601.2424102301775 4747.818243123843 4887.117826987959 1.1016730204579712 0.9064458863568466 1.1549805783128384 0.9018181721103351 1.0016547045850497 0.8642357246454968 0.925731208375962 0.8518264626759675 0.941504292125084 0.9714965775748505 1.0 12.25476817262339 -6.29517739514222 24.998729438297353 0.9504700756826565 1.0395745643767178 0.32514385515877553 0.07424746909667859 666.2425948766465 493661.92049432086 0.010182943626208767 0.023664060646866544 5.06783661382011e-07 6.29517739514222 0.08910448869406129 GALSSS(ph)LRDLSDAGVCY ddPTM_A549_MK2206_60min_R1 1 GALSSSLRDLSDAGVCY 17 1 A0A1W2PR28;Q5JU85-3 A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 GALS(0.016)S(0.228)S(0.623)LRDLS(0.132)DAGVCY(0.001) 76.158 0.00037218 9285100.0 1698.8 1990.4 1752.6 1803.8 2507.9 1963.9 1914.7 1482.0 2409.7 3047.6 2785.8 True False 1985.5159083276212 2091.702858314227 2001.1450336486919 2245.731080975659 2138.9912321950414 2171.718594468687 2262.5762057217594 1692.0780384346524 1863.9067975001794 2359.145043349876 2094.008975831363 0.9481888240423287 0.9988987069569649 0.9556525577232532 1.0724553270284143 1.0214814057068784 1.0371104515473588 1.0804997647268784 0.8080567265777187 0.8901140439286663 1.126616490463346 1.0 11.0320519109612 -8.223489946711158 24.999965850734778 0.9361555026260245 1.0164792029237615 0.09170995951631866 0.08270198802914594 616.8270225879007 406348.073878858 0.010899957722972593 0.014071638315959879 5.977368812724401e-09 8.223489946711158 0.08032370029773694 GANPVEIR ddPTM_A549_PD325901_60min_R1 2 GANPVEIR 8 0 P10809;E7EXB4;E7ESH4;P10809-2 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 120.46 0.0033265 41159000.0 10401.599999999999 10417.099999999999 10390.1 10393.8 11194.3 9877.8 10279.3 11153.5 10558.1 10877.7 13647.1 False True 11457.562774746784 11294.985575815634 11095.234666746908 11035.801419967516 10408.050986238493 9797.358471774147 10670.484386548795 10931.03469274852 10114.379773781775 10190.880165600101 11968.59321609463 0.9573023803114434 0.9437187288332959 0.9270291392163548 0.9220633720868086 0.8696135626234155 0.8185889765723895 0.8915404002702491 0.9133099016222839 0.8450767430361471 0.851468504410028 1.0 13.546965967968202 -4.080301675608592 14.155571392017654 0.9150991922458339 0.9068891770327082 0.0 0.05299446613461124 0.0 0.0 0.008480267907331609 0.0 8.311862005307637e-05 4.080301675608592 -0.008210015213125699 GAPANVS(ph)SSDLTGR ddPTM_A549_MK2206_60min_R1 1 GAPANVSSSDLTGR 14 0 H0Y5S9;H0Y682;P49674 H0Y5S9 CSNK1E Casein kinase I isoform epsilon 1 GAPANVS(0.596)S(0.195)S(0.195)DLT(0.014)GR 67.13600000000001 0.0038904000000000005 3980600.0 2345.5 2536.7 2397.8 2077.6 2847.2 2120.1 2185.3 2299.8 2851.4 3006.6 3901.3 True False 2741.363058030629 2665.8071948782667 2737.844095448384 2586.612093267007 2428.380651663034 2344.4475747915167 2582.3407230186235 2625.8036928421147 2205.562452750139 2327.4069718256123 2932.499539597564 0.9348213089257074 0.9090563046581429 0.9336213214969872 0.8820502981637214 0.8280924238427291 0.7994707392565363 0.8805937351904942 0.895414869597034 0.7521100763933335 0.7936597910412664 1.0 11.517915166412763 -6.351974827321515 5.080112327131224 0.8711269145474905 0.9240025523841106 0.16667194219856107 0.06389910610225774 0.5318554350370536 22.495878156266304 0.01274195256203545 0.030364121977723497 4.446570400376908e-07 6.351974827321515 0.05287563783662008 GAPDPRVDDDS(ph)LGEFPVTNSR ddPTM_A549_MK2206_60min_R1 1 GAPDPRVDDDSLGEFPVTNSR 21 1 J3KMZ8;Q92785;Q92785-2 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 GAPDPRVDDDS(0.978)LGEFPVT(0.011)NS(0.011)R 49.25 0.0037681999999999993 1303600.0 668.48 867.97 572.41 517.98 793.02 416.72 549.58 809.37 920.58 651.2 874.17 True False 781.3030812331341 912.1459656003822 653.5863452646627 644.8851232530055 676.3678085072413 460.81703380365127 649.4315721212536 924.1006760916692 712.0700998641806 504.0934677219578 657.0894631353658 1.1890360827048894 1.38816099903351 0.9946687352830349 0.9814266693242559 1.0293389963672328 0.7013002941864541 0.9883457406582479 1.406354428029075 1.0836729849029527 0.7671610884104383 1.0 9.359945997514096 -5.770046296028464 24.986966330314218 1.0319530634614722 1.2885985515361575 0.2696539758319332 0.17812030622348018 157.9006068528612 458411.00165058736 0.022127122159186968 0.07037115656809059 1.6980626284116424e-06 5.770046296028464 0.25664548807468535 GAPES(ph)GEEGLAPDSEVGR ddPTM_A549_MK2206_60min_R1 2 GAPESGEEGLAPDSEVGR 18 0 I3L417;O95201 I3L417 ZNF205 Zinc finger protein 205 1 GAPES(1)GEEGLAPDSEVGR;GAPES(1)GEEGLAPDSEVGR 111.43 1.8882e-09 2939900.0 1037.53 1262.41 1185.03 1444.14 2275.22 1588.73 1160.87 1456.3600000000001 1896.49 1902.87 1486.35 True False 1212.6396988269112 1326.6612768109242 1353.0850731625637 1797.9543648299086 1940.5381519657076 1756.8483540863785 1371.7850524553296 1662.8034899154452 1466.9380430722156 1473.0103453993884 1117.248273826889 1.0853806868488414 1.1874364077258646 1.2110871906097178 1.609270210524837 1.7368907139313086 1.5724780205465698 1.22782472310884 1.4883025813231971 1.3129919977835731 1.3184270496600674 1.0 10.125734100401221 -10.087226068737772 0.7280007625140215 1.0123608755117235 1.396897805815819 0.08264675516737885 0.21224336830318943 0.5824671792348415 0.6083188291552049 0.11310449379450913 0.0443282286440773 8.180388532914532e-11 10.087226068737772 0.3845369303040955 GAPES(ph)GEEGLAPDSEVGR ddPTM_A549_PD325901_60min_R1 2 GAPESGEEGLAPDSEVGR 18 0 I3L417;O95201 I3L417 ZNF205 Zinc finger protein 205 1 GAPES(1)GEEGLAPDSEVGR;GAPES(1)GEEGLAPDSEVGR 124.25 5.2790999999999995e-22 1994700.0 733.53 579.55 640.57 556.44 780.75 568.54 700.91 762.24 764.08 654.95 804.0 True False 807.9974256037547 628.3907124309015 684.042932260331 590.8100350330702 725.9128134412786 563.9099987388364 727.5835136026689 747.0365252342882 731.9683747597746 613.5963452255336 705.1130969759206 1.145911810557885 0.8911913778455329 0.9701180352400841 0.8378940024897116 1.0294984117506305 0.7997440427036824 1.031867819110323 1.0594563176292828 1.038086482720333 0.8702098257103963 1.0 9.461710867655203 GAPHRHS(ph)MPELGLR ddPTM_A549_MK2206_60min_R1 4 GAPHRHSMPELGLR 14 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR 123.72 4.9043e-07 77268000.0 3821.75 3874.81 3154.38 2736.07 4717.7 3158.69 3045.06 3580.21 4488.93 4523.09 4619.58 True False 4466.767967183351 4072.021278348347 3601.7185160565796 3406.4072728268507 4023.7325794994 3492.9404792312725 3598.307986104923 4087.715731433283 3472.1945223482103 3501.3208275775655 3472.410792078057 1.2863593147947288 1.1726784422045453 1.037238602147397 0.9809920187433507 1.1587720521659264 1.0059122288181028 1.0362564228616291 1.1771981992335065 0.9999377177002386 1.0083256380741195 1.0 11.761721915807628 -2.0000000028764924 0.6232733198838957 1.0195502974781032 21.58384058970488 0.5293335600576474 0.06663807326944474 90.03552602413636 0.5890347987546395 0.011246541935406194 2545.0717283466734 0.009999999933766315 2.0000000028764924 20.56429029222678 GAPHRHS(ph)MPELGLR ddPTM_A549_PD325901_60min_R1 6 GAPHRHSMPELGLR 14 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR 124.2 4.2248000000000006e-07 104933000.0 6305.610000000001 6647.049999999999 6649.01 7956.76 7718.76 7094.04 6074.68 6435.07 6807.27 8808.4 8770.0 True False 6945.750885255259 7207.220231324007 7100.251802345195 8448.23099408693 7176.620925876412 7036.268490261466 6305.855271592449 6306.717480635241 6521.184114819094 8252.236120749054 7691.3455976104815 0.9030605629544379 0.9370558298099515 0.9231481945826325 1.098407409584039 0.9330774225131708 0.914829323551326 0.8198637275578318 0.8199758287541505 0.8478599787331194 1.0729248888923713 1.0 12.90902030380837 -6.994415501834493 24.988858686130303 0.908264645995308 0.9672940376595291 0.07683895703576415 0.08475080447962823 295.49948118456734 1322248.7344727693 0.0122493987957139 0.02309940103647482 1.0129418118729655e-07 6.994415501834493 0.059029391664221165 GAPHS(ph)SPAR ddPTM_A549_MK2206_60min_R1 2 GAPHSSPAR 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GAPHS(0.5)S(0.5)PAR;GAPHS(0.5)S(0.5)PAR 85.958 0.00037864 261260000.0 1521.01 1324.01 1021.73 651.64 1559.97 1206.44 1372.82 1631.17 1791.3200000000002 1802.96 2247.0 True False 1777.71930287579 1391.3964536960507 1166.6266776388675 811.2918292532312 1330.500479479764 1334.1046800299418 1622.24362393009 1862.3933427486174 1385.5888801502347 1395.6700837898986 1689.0078859548694 1.052522796168455 0.8237951197660832 0.6907171288778932 0.4803363181425128 0.7877408332688597 0.789874749030976 0.9604713142076098 1.1026552085609274 0.820356667172635 0.8263253803583432 1.0 10.721960348740653 -7.66289923671937 4.4960841750475815 0.9330499732519403 0.7535642128680254 0.252856086849776 0.1453805701765848 0.24621737779572564 8.788631635913758 0.02353395852949881 0.0351223627034447 2.1732053388454153e-08 7.66289923671937 -0.17948576038391484 GAPHS(ph)SPAR ddPTM_A549_PD325901_60min_R1 2 GAPHSSPAR 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GAPHS(0.5)S(0.5)PAR;GAPHS(0.5)S(0.5)PAR 113.44 7.295399999999999e-05 275550000.0 1205.59 1556.61 1313.9299999999998 1180.56 1488.23 1102.93 1011.15 1178.1480000000001 955.1800000000001 1678.82 1803.5700000000002 True False 1327.9806092915508 1687.790987623271 1403.10119110295 1253.4805099537073 1383.7018589147795 1093.9481037552769 1049.6298665725105 1154.6489139007736 915.0371063279255 1572.8190186907873 1581.7423237722164 0.8395682339235367 1.0670454740049848 0.8870605344597252 0.7924682112345237 0.8747960006626487 0.6916095544224776 0.6635909343750137 0.729985470166285 0.5784994765428672 0.9943585595786877 1.0 10.627298879103355 -6.158219263753641 2.9679321455772243 0.7783954206526135 0.9576623695870655 0.18399392741259768 0.13314005283731764 0.36820471438700353 6.20575188221343 0.0231320114833611 0.0701572554699297 6.946735068283185e-07 6.158219263753641 0.17926694893445205 GAPHSS(ph)PAR ddPTM_A549_MK2206_60min_R1 3 GAPHSSPAR 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GAPHS(0.033)S(0.967)PAR;GAPHS(0.086)S(0.914)PAR;GAPHS(0.125)S(0.875)PAR 103.01 0.00025212 311396000.0 6763.32 6289.37 4432.32 4016.87 7987.08 6639.33 7367.009999999999 7178.25 8782.56 10117.800000000001 12171.75 True False 7904.803068701642 6609.4720689287315 5060.889624296346 5001.003330324146 6812.191112420896 7341.899493769428 8705.500356877976 8195.78891996865 6793.324182866407 7832.181952882717 9149.168551789575 0.8639914134225305 0.7224123188369855 0.5531529554460375 0.5466074105002636 0.7445694189433677 0.8024663063326508 0.9515072662176698 0.8957960358447606 0.7425072720446968 0.856053958187353 1.0 13.15942492634151 -7.282257454019708 2.573736470298203 0.8812612082995632 0.6671798641466308 0.4768803050887569 0.10125402856254691 0.23115408462527323 3.0218740168955844 0.019024357468361792 0.03342744409678866 5.220865991981128e-08 7.282257454019708 -0.21408134415293245 GAPHSS(ph)PAR ddPTM_A549_PD325901_60min_R1 3 GAPHSSPAR 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GAPHS(0.108)S(0.892)PAR;GAPHS(0.421)S(0.579)PAR;GAPHS(0.036)S(0.964)PAR 126.71 1.7706e-05 362691000.0 7624.24 6892.0599999999995 5789.52 6209.18 5279.88 5249.969999999999 4516.48 4886.96 5458.77 7654.67 9229.98 True False 8398.247232131158 7472.878083886673 6182.4316424119625 6592.706946529076 4909.039443397168 5207.215984942005 4688.3571179126875 4789.485749054048 5229.356880284022 7171.352829845846 8094.750973663937 1.0374929703773024 0.9231757849252545 0.7637581023216581 0.8144422191588447 0.6064472470331207 0.643283036363138 0.5791848486959187 0.5916779607719269 0.6460182527291574 0.8859263062171594 1.0 12.98277098290626 -5.555186855722988 2.232193000721594 0.7634163182725289 1.0451607779133403 0.34243966272129045 0.13160008815886298 0.48049858815277097 4.016671826697356 0.024813358780144734 0.20798321494213928 2.7849226944881893e-06 5.555186855722988 0.2817444596408114 GAPPGS(ph)PEPPALLAAPLAAGACPGGR ddPTM_A549_MK2206_60min_R1 2 GAPPGSPEPPALLAAPLAAGACPGGR 26 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GAPPGS(1)PEPPALLAAPLAAGACPGGR;GAPPGS(1)PEPPALLAAPLAAGACPGGR 60.993 0.00016259 2653200.0 1069.05 826.0699999999999 1109.6 863.6600000000001 1349.8 1094.56 1150.32 1053.5900000000001 1142.83 1618.9099999999999 1399.75 True False 1249.4795042368983 868.1134345697512 1266.9579649301554 1075.2567387711704 1151.2462080692476 1210.385612689875 1359.318254016741 1202.9396089840525 883.9808297245011 1253.1971066181738 1052.1534438652984 1.1875449455800693 0.8250825387032532 1.2041570289175019 1.0219581041535133 1.094180905629042 1.150388871268889 1.2919391766879655 1.1433119532117013 0.8401634142611545 1.191078272779587 1.0 10.039129404273737 -8.751410926064866 24.99403398928518 0.9245216108331631 1.1114465885175664 0.006925501527046851 0.14259673387293892 175.31797692649337 436946.613622742 0.02083947713141718 0.02349516326080232 1.7725115505340433e-09 8.751410926064866 0.1869249776844033 GAPPGS(ph)PEPPALLAAPLAAGACPGGR ddPTM_A549_PD325901_60min_R1 2 GAPPGSPEPPALLAAPLAAGACPGGR 26 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GAPPGS(1)PEPPALLAAPLAAGACPGGR;GAPPGS(1)PEPPALLAAPLAAGACPGGR 81.97 8.802600000000001e-07 8360100.0 1172.58 965.6099999999999 1153.74 1316.6 1070.05 1297.56 1270.95 1385.97 1139.72 1232.64 1095.53 True False 1291.619458392227 1046.9853435085902 1232.039734402227 1397.9233917844515 994.8933794720976 1286.993101564647 1319.3166977405256 1358.3257410775682 1091.8215318830623 1154.810900036342 960.7867551368538 1.3443352039217584 1.0897166701256809 1.2823238120374965 1.4549777922212637 1.0354986412467622 1.3395200284389106 1.3731628695824423 1.4137640155999958 1.1363827884237891 1.201942984603125 1.0 9.908072452776967 -9.107267897230209 2.358979032752632 1.0493200113337322 1.2850129067242588 0.23210102613192973 0.1323242148017457 0.19196550866187245 2.206246998544529 0.024285553839345733 0.023466880709552877 7.811458013340407e-10 9.107267897230209 0.23569289539052662 GAPPS(ph)SNIEDFHGLLPK ddPTM_A549_MK2206_60min_R1 2 GAPPSSNIEDFHGLLPK 17 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4 D6REM6 MATR3 Matrin-3 1 GAPPS(0.5)S(0.5)NIEDFHGLLPK;GAPPS(0.5)S(0.5)NIEDFHGLLPK 73.783 0.00016795 2513600.0 924.0 982.5899999999999 760.91 814.14 963.81 734.19 884.1199999999999 742.07 1271.96 1188.32 1188.65 True False 1079.94861036892 1032.5996340187787 868.8184797179205 1013.6043365481336 822.034825751387 811.8814984841208 1044.753159765353 847.260694994064 983.8630909027381 919.877686675917 893.4753999289077 1.2087054780185886 1.1557113202008034 0.9724033586006406 1.1344513084845809 0.9200419237248109 0.9086780660650767 1.1693138499934999 0.948275347101307 1.1011641629764204 1.0295500992518765 1.0 9.80328419784491 -5.613790508446561 5.389406281800726 1.034517557378088 1.1963994508313422 0.36159004642748505 0.08222595641294678 0.15458661889638087 6.974792491874806 0.010916032051600804 0.044795530569864635 2.4333775195091483e-06 5.613790508446561 0.1618818934532542 GAPPS(ph)SNIEDFHGLLPK ddPTM_A549_PD325901_60min_R1 1 GAPPSSNIEDFHGLLPK 17 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4 D6REM6 MATR3 Matrin-3 1 GAPPS(0.5)S(0.5)NIEDFHGLLPK 81.35600000000001 7.1616e-05 1532700.0 747.33 736.35 715.53 856.41 876.19 808.36 747.16 904.7 990.17 916.55 771.28 True False 823.1983914447312 798.4047987205499 764.0901686314294 909.3085006517708 814.649437091405 801.7769841709036 775.59358266164 886.6550487765799 948.5565983089278 858.6788765805985 676.4174495467514 1.216997568581848 1.1803432913440344 1.1296133314470598 1.3443007735253922 1.2043589910894212 1.1853286527545261 1.146619714174056 1.3108104312960922 1.402324258406594 1.2694511017655967 1.0 9.401770067219028 -11.067645276568529 1.4047296654502406 1.00100069890253 1.2523065426863578 0.0 0.11280933966504482 0.2915762515319984 1.0335191410716333 0.06795889057125612 0.015294820781432199 8.557654003299769e-12 11.067645276568529 0.2513058437838278 GAPPSS(ph)NIEDFHGLLPK ddPTM_A549_PD325901_60min_R1 1 GAPPSSNIEDFHGLLPK 17 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4 D6REM6 MATR3 Matrin-3 1 GAPPS(0.461)S(0.539)NIEDFHGLLPK 92.31 1.491e-06 1808000.0 561.08 801.74 711.48 810.48 883.52 1101.8 782.83 1262.0 964.63 869.69 1036.1 True False 618.0404285547346 869.3054435067748 759.765311276801 860.5415088663691 821.464603178532 1092.8273061006264 812.6210240310133 1236.8284199801526 924.0899556911863 814.7776249777756 908.666268379044 0.6801621784169974 0.9566828589967532 0.8361324038495836 0.947038025744563 0.9040333417943754 1.202671810465799 0.8943008586426738 1.3611470602804614 1.0169739846727845 0.8966742282964295 1.0 9.827606713720476 -4.80770020347563 0.5828968886982921 1.0359293842033956 0.3336189733586476 0.3487519095333792 0.13940908765771676 4.452371710428489 0.7057295365974373 0.022009108685420463 2.3718938039584425 1.5570400963973156e-05 4.80770020347563 -0.702310410844748 GAPS(ph)QDDESGGIEDSPDR ddPTM_A549_MK2206_60min_R1 2 GAPSQDDESGGIEDSPDR 18 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GAPS(1)QDDESGGIEDSPDR;GAPS(1)QDDESGGIEDSPDR 83.38600000000001 0.00015215 4615700.0 235.59 530.98 535.4000000000001 579.87 643.6800000000001 562.63 620.89 474.65 524.62 724.55 936.66 True False 275.3518323775041 558.0046140010492 611.3277707494636 721.9381760313532 548.9955246777398 622.1671331564321 733.6976760696627 541.9330910546611 405.794407645991 560.8736517781709 704.0614714991043 0.39109061285688373 0.7925509867951339 0.8682874940561797 1.0253908291476104 0.7797551022197048 0.8836829713628543 1.0420932060200032 0.7697241121585084 0.5763621843728559 0.7966259687296132 1.0 9.45955758561923 -5.263643277652423 4.100925775914919 0.8330379870701267 0.35457501746528897 0.5069940744947364 0.13020366557418792 0.19252710255418565 6.9774107650925545 0.02349769445720008 0.27017403845608867 5.449500821001335e-06 5.263643277652423 -0.4784629696048377 GAPS(ph)QDDESGGIEDSPDR ddPTM_A549_PD325901_60min_R1 2 GAPSQDDESGGIEDSPDR 18 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GAPS(1)QDDESGGIEDSPDR;GAPS(1)QDDESGGIEDSPDR 97.631 1.5513999999999999e-06 5928100.0 794.3299999999999 853.01 643.46 796.1800000000001 777.7 734.1 756.53 801.94 1012.45 806.0699999999999 942.15 True False 874.96979684516 924.8961463388554 687.1290650393125 845.3582303440254 723.0770349193501 728.1217329900791 785.320163139101 785.9446775902402 969.9002473897157 755.1746026352328 826.2715227809255 1.0589373743637371 1.1193610342832532 0.8316020171271173 1.023099800775974 0.8751082604005754 0.8812136360932417 0.9504383746592195 0.9511941969693449 1.1738275138968712 0.9139545316696784 1.0 9.690472136310209 -8.732269040173744 24.873295329318584 1.0820852217560302 0.958456195897855 0.014146241879304355 0.10122454916130721 204.92791408505292 174740.17673605538 0.01674089120918274 0.01898086057542329 1.8523837386010073e-09 8.732269040173744 -0.12362902585817515 GAPSITSVT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GAPSITSVTPR 11 0 H7C3L4;E7EQA9;Q92844 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 GAPSIT(0.008)S(0.045)VT(0.947)PR;GAPS(0.004)IT(0.013)S(0.027)VT(0.956)PR 73.9 0.0015433 27177000.0 12295.5 11881.2 11282.3 12391.2 13751.3 12540.0 11921.8 13085.6 13590.7 13883.7 14550.5 True False 13543.730108531303 12882.470421075022 12047.984723981343 13156.576281542979 12785.45612740962 12437.878397623748 12375.490622859283 12824.597442545391 13019.530141932351 13007.080812592934 12760.880743219073 1.0613475966953319 1.0095283139387192 0.9441342620793198 1.0310084818035912 1.0019258376192886 0.9746880836758103 0.9697990970909606 1.0049931270896153 1.0202689300149381 1.0192933445839691 1.0 13.639440285456633 -8.513427629442688 24.547652688814505 1.0097324708619841 0.9969061515491201 0.03599364087998169 0.029864299969991386 1088.4075498510017 2826963.057136955 0.004926647630335377 0.005740191783979828 3.0660015534151045e-09 8.513427629442688 -0.012826319312864043 GAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRS(ph)PQREPQR ddPTM_A549_MK2206_60min_R1 2 GAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRSPQREPQR 44 2 O96013;O96013-4;O96013-3 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 GAPSPGVLGPHASEPQLAPPACT(0.003)PAAPAVPGPPGPRS(0.997)PQREPQR;GAPSPGVLGPHASEPQLAPPACT(0.006)PAAPAVPGPPGPRS(0.994)PQREPQR 96.602 2.7496e-11 14314100.0 1386.46 1301.51 1403.82 778.89 1592.27 1388.78 1174.48 1374.5 1879.52 2006.3200000000002 2009.2 True False 1620.460552307459 1367.7512998013221 1602.9027850831385 969.7180849657005 1358.0491922673145 1535.7397778024447 1387.867813284635 1569.3395842297105 1453.8117209766926 1553.0909185502449 1510.2601889009886 1.0729677999965441 0.9056395115576941 1.0613421428062442 0.6420867689502967 0.8992153817254247 1.0168709928850057 0.9189594107586071 1.0391186868083397 0.9626233490499585 1.0283598349238245 1.0 10.560581404345212 -7.24921028892221 23.57466167265513 0.9835447007141184 0.9084901738489132 0.10543776055159115 0.1097802702803663 656.6744216701595 1265902.9553682038 0.01527028643914975 0.026304841129514183 5.633648039502805e-08 7.24921028892221 -0.0750545268652052 GAPSQDDES(ph)GGIEDSPDR ddPTM_A549_MK2206_60min_R1 2 GAPSQDDESGGIEDSPDR 18 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GAPSQDDES(1)GGIEDSPDR;GAPSQDDES(1)GGIEDSPDR 149.57 4.4748e-17 7920600.0 883.25 769.64 824.1500000000001 813.6 744.6800000000001 871.47 696.81 958.55 1217.2 963.99 1206.68 True False 1032.3210066107665 808.8113886017693 941.0268626506739 1012.9320365238923 635.1385584716312 963.6883769650317 823.4113573452654 1094.4273979362583 941.5061434689875 746.2239894798685 907.0280533262215 1.1381356980361026 0.891715957004554 1.0374837461749646 1.1167593249285988 0.7002413609396901 1.0624681049621645 0.9078124478351911 1.2066081020568356 1.0380121541073941 0.8227132410550501 1.0 9.82500336210375 GAPSQDDES(ph)GGIEDSPDR ddPTM_A549_PD325901_60min_R1 2 GAPSQDDESGGIEDSPDR 18 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GAPSQDDES(1)GGIEDSPDR;GAPSQDDES(1)GGIEDSPDR 179.14 4.8598999999999995e-31 10102600.0 1165.8000000000002 1045.13 1025.19 1160.58 1781.2800000000002 1206.53 1116.3 1227.78 1498.89 1236.51 1380.49 True False 1284.1511577834005 1133.206772984054 1094.76555836828 1232.26639073158 1656.1690378823967 1196.704419703747 1158.7814073627983 1203.2909647252236 1435.896865830383 1158.4365475758834 1210.6984816471258 1.0606696689966475 0.9359942133918874 0.9042429431966231 1.0178144347344944 1.3679450854098858 0.988441331879478 0.9571180809496881 0.9938816170713087 1.1860069931506647 0.9568332372894849 1.0 10.241623898501025 -6.526566381266958 24.999885303265103 1.0851015607813104 0.9633976377904485 0.09573126363145301 0.12121863300855454 147.43670249726875 999531.5342340006 0.017503012069309248 0.03657089435205262 2.9746345556546665e-07 6.526566381266958 -0.12170392299086186 GAPSQDDESGGIEDS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 GAPSQDDESGGIEDSPDR 18 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GAPSQDDESGGIEDS(1)PDR;GAPSQDDESGGIEDS(1)PDR 242.45 1.2865999999999997e-74 10027200.0 1679.76 2012.06 1827.29 1301.63 2517.1000000000004 2349.5 1796.78 1773.19 2120.4700000000003 2035.5 2277.08 True False 1963.2624218109274 2114.4652597968884 2086.427198753805 1620.529408432392 2146.8379243822064 2598.122530528124 2123.231668102963 2024.545112666628 1640.186930694779 1575.6791362838544 1711.618191789102 1.147021240618382 1.2353603566147557 1.2189793312332855 0.9467820663547064 1.2542738413747418 1.5179334637781492 1.2404820644513097 1.1828251898575775 0.9582668252551942 0.9205786336243864 1.0 10.741145202379764 -8.696392960153712 4.76609676425127 0.9801280924675924 1.2239803235028193 0.4528453533604535 0.12629954332733262 0.1473265497940509 6.546967810562097 0.02236755725555986 0.02514773977686926 2.011903007521257e-09 8.696392960153712 0.2438522310352269 GAPSQDDESGGIEDS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 GAPSQDDESGGIEDSPDR 18 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 GAPSQDDESGGIEDS(1)PDR;GAPSQDDESGGIEDS(1)PDR 235.45 2.8828999999999994e-74 15346300.0 2194.6000000000004 2456.8999999999996 1840.59 2625.5 3439.3999999999996 2933.2 2434.39 2626.3 2568.6000000000004 2594.2 3213.9 True False 2417.3941764208694 2663.951585491301 1965.5035057668053 2787.6711720568715 3197.828409285858 2909.3129916993616 2527.032043599322 2573.916386207506 2460.650674547111 2430.401769271059 2818.6106745906854 0.8576545168913475 0.9451293183221043 0.6973306116681875 0.9890231372453356 1.1345406579609445 1.03217979621178 0.8965523569395741 0.9131862053212746 0.8730012614829975 0.8622694120833124 1.0 11.46076850161729 GAPSS(ph)PATGVLPS(ph)PQGK ddPTM_A549_PD325901_60min_R1 2 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 2 GAPS(0.097)S(0.852)PAT(0.051)GVLPS(1)PQGK;GAPS(0.1)S(0.9)PATGVLPS(1)PQGK 171.78 8.3263e-30 16094500.0 5606.2 6239.0 6018.2 5992.4 5799.5 6705.1 6022.8 6007.0 6694.5 6941.9 6582.4 True False 6175.337296933686 6764.782425772405 6426.631242376512 6362.5369382721765 5392.163127188852 6650.495888668817 6252.000949802617 5887.185672599666 6413.15344575085 6503.587249287931 5772.806529271521 1.0697287819401355 1.1718359850570055 1.1132594189307603 1.1021566210491163 0.9340626781527177 1.1520385890202445 1.0830089174305944 1.019813437839667 1.1109247145616943 1.1265901977332728 1.0 12.495057160113847 -10.928078622826584 0.9242698534209005 0.9941855140270762 1.0861083503080005 0.0 0.07164170026265371 0.863310006818648 1.1644942495437856 0.058094537418375246 0.010573949918835732 1.1801069747627424e-11 10.928078622826584 0.09192283628092424 GAPSS(ph)PATGVLPSPQGK ddPTM_A549_MK2206_60min_R1 3 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPS(0.005)S(0.995)PATGVLPSPQGK;GAPS(0.008)S(0.968)PAT(0.024)GVLPSPQGK;GAPS(0.009)S(0.991)PATGVLPSPQGK 218.12 1.7636e-55 48727000.0 9848.7 11610.8 9856.2 9614.599999999999 13584.900000000001 10383.8 9599.7 9771.0 14905.099999999999 15024.599999999999 14995.599999999999 True False 11510.919782403013 12201.740126263483 11253.95736656867 11970.177431615797 11586.579205808208 11482.606823791413 11343.841229470505 11156.06917243252 11529.118648553736 11630.532424962114 11271.77866249436 1.0212159169434696 1.0825035242098455 0.998418945540069 1.0619599435043277 1.0279282048325977 1.018704072144227 1.006393185062791 0.9897345846182333 1.022830468355065 1.031827608863672 1.0 13.460427567205937 -7.239664018701928 2.3782376748078606 1.0090003023690155 1.0411406130414582 0.2689758211632651 0.022608577628407945 0.26196094803363307 2.905583781752461 0.0030850877940578445 0.005571288861398581 5.758852846065758e-08 7.239664018701928 0.03214031067244272 GAPSSPAT(ph)GVLPSPQGK ddPTM_A549_PD325901_60min_R1 1 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPS(0.309)S(0.273)PAT(0.415)GVLPS(0.003)PQGK 67.605 0.0017179000000000003 3632200.0 2155.4 2287.4 2106.3 2119.2 2836.0 2393.5 2212.3 2578.1 2603.1 2287.2 2435.1 True False 2374.2146212783828 2480.167225630997 2249.2461842108373 2250.098170947599 2636.809143668866 2374.0081295623963 2296.49028711701 2526.6777730196764 2493.7007595240925 2142.7858016640057 2135.5981373707264 1.1117328582246437 1.1613454714305436 1.0532160263915713 1.0536149716434202 1.2346935022687429 1.1116361678818432 1.0753382141194263 1.1831241696672548 1.167682587789784 1.0033656445786794 1.0 11.060424480485715 -10.854674941956068 1.0922576064290588 0.999719516757928 1.1299346927484735 0.4495016482426475 0.05372413361107849 0.38344088745065724 0.8093673810951133 0.03803664399810521 0.009191137242306144 1.3974138974276397e-11 10.854674941956068 0.13021517599054544 GAPSSPATGVLPS(ph)PQGK ddPTM_A549_MK2206_60min_R1 1 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPSSPAT(0.001)GVLPS(0.999)PQGK 191.96 7.2939e-40 24215000.0 3755.4 4469.9 4772.5 3787.4 5895.8 4943.0 3465.1 4738.9 6543.7 6567.6 6605.0 True False 4389.2197092851075 4697.3988175134455 5449.312263544666 4715.313170022848 5028.535630119033 5466.064979102154 4094.6638170190968 5410.653587272586 5061.562398141646 5083.974598603704 4964.796211273657 0.884068453669543 0.9461413152964815 1.0975903202574175 0.949749590792004 1.0128382749528857 1.1009646210030246 0.8247395548121927 1.089803761730746 1.019490465016119 1.0240046886636407 1.0 12.277518785694935 -5.528335333765486 24.74144645324062 1.0096728130580428 0.8995866310192405 0.2214720348050606 0.07442014635427086 105.23740275676847 477175.64601285616 0.008930451597954305 0.03481854003752439 2.9625430244106456e-06 5.528335333765486 -0.11008618203880227 GAPSSPATGVLPS(ph)PQGK ddPTM_A549_PD325901_60min_R1 2 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPSS(0.01)PAT(0.029)GVLPS(0.961)PQGK;GAPSS(0.002)PAT(0.036)GVLPS(0.962)PQGK 251.02 5.4452999999999984e-86 128048000.0 18728.4 20440.9 19674.4 19923.0 24075.0 23726.0 21837.2 23529.0 21574.1 24059.0 25495.0 True False 20629.693380880606 22163.5263803448 21009.623095778235 21153.5984615841 22384.055054241162 23532.783322330215 22668.226595774344 23059.695636856577 20667.415602953683 22539.910634065378 22359.276626120787 0.9226458317877946 0.9912452335087036 0.9396378714342732 0.9460770495979205 1.001108194533066 1.0524841083113798 1.0138175297358516 1.031325656122414 0.9243329267105796 1.0080787053608689 1.0 14.448585893992197 -6.743757911021545 24.906249352925403 0.981381278735897 0.9521214977990926 0.1941182153008687 0.03801566434190711 504.57183027780957 710739.2241822811 0.00661155186920689 0.013738984904597568 1.8040230780683933e-07 6.743757911021545 -0.02925978093680437 GAPT(ph)PSPAAR ddPTM_A549_MK2206_60min_R1 2 GAPTPSPAAR 10 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GAPT(0.898)PS(0.102)PAAR;GAPT(0.882)PS(0.118)PAAR 86.87899999999999 0.0007803999999999999 30751600.0 4611.0199999999995 5223.799999999999 5433.6 4316.04 6844.7 4817.33 5097.21 4901.81 6309.0 6437.5 7694.299999999999 True False 5389.247447384521 5489.669107346194 6204.166184430869 5373.469993754396 5837.853697119262 5327.096663115146 6023.307077645062 5596.656578663537 4880.0215734027615 4983.264278962078 5783.592958123073 0.9318165172421596 0.9491797135612626 1.0727183308633605 0.9290885497409256 1.009381839176628 0.9210704663496803 1.0414472666485477 0.9676781577104275 0.8437698864247971 0.8616208497112627 1.0 12.497750305491696 -8.543715490690897 24.952415878529756 0.9251456856934219 0.9805240309502763 0.22183758720296742 0.05942146821965727 373.1389644444575 446839.1862325466 0.011508514232262911 0.013050038496010382 2.8594631839629326e-09 8.543715490690897 0.05537834525685437 GAPTPS(ph)PAAR ddPTM_A549_MK2206_60min_R1 1 GAPTPSPAAR 10 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GAPT(0.411)PS(0.589)PAAR 73.887 0.0016542999999999998 26842000.0 1926.7 2472.7 2016.1 1857.2 2405.1 2002.7 2086.0 2040.2 2766.6 3219.7 3296.7 True False 2251.8798567075733 2598.5498682443676 2302.0132958684967 2312.2140833728763 2051.3129760167044 2214.6243847153305 2464.999198378644 2329.404597850458 2139.9695173523673 2492.367533821236 2478.038405708686 0.9087348491128675 1.0486317977389124 0.9289659476484795 0.9330824244072254 0.8277970879269146 0.8937005897945224 0.9947380931223652 0.9400195705135891 0.8635739915985542 1.0057824479554232 1.0 11.274982831824255 -6.503251736627367 0.003698080733187879 1.8503375682937073 4.961289835010344e-07 0.03131451623175274 0.06256023633079558 109942.2254164187 92.49013293412389 22724.68994951047 23556.40337945924 3.138688841182188e-07 6.503251736627367 -1.8503370721647239 GAPVNIS(ph)SSDLTGR ddPTM_A549_MK2206_60min_R1 2 GAPVNISSSDLTGR 14 0 H7BYT1;P48730-2;P48730;J3KRM8 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.95)S(0.028)S(0.011)DLT(0.012)GR;GAPVNIS(0.652)S(0.084)S(0.135)DLT(0.129)GR 87.251 8.0898e-05 36562000.0 5698.200000000001 7070.799999999999 4896.6 5752.0 7406.099999999999 5465.7 6004.3 5336.5 8873.5 8170.1 9240.1 True False 6659.916852385474 7430.673518171343 5591.011509622384 7161.240258217089 6316.672500801343 6044.076746161971 7095.203589081927 6092.965217345834 6863.666418067743 6324.468735619115 6945.528156213428 0.95887838946093 1.0698500317105342 0.804980036632736 1.0310576959954711 0.9094589149639377 0.8702112510702266 1.0215498993744054 0.8772500924778636 0.9882137490044652 0.9105813976092348 1.0 12.76186868936237 -8.966617449790846 24.820590981204376 0.9948002402432725 0.9438212558979828 0.0 0.07815460569819142 281.98141484212186 209660.27173615003 0.011727642273788084 0.012412521696571215 1.0798975359098278e-09 8.966617449790846 -0.05097898434528969 GAPVNIS(ph)SSDLTGR ddPTM_A549_PD325901_60min_R1 1 GAPVNISSSDLTGR 14 0 H7BYT1;P48730-2;P48730;J3KRM8 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.915)S(0.068)S(0.018)DLTGR 223.7 6.4229e-47 30760000.0 6717.4 6501.5 6804.5 7543.6 9216.7 7691.0 7810.7 8696.3 7536.4 7659.4 8360.0 True False 7399.3455029114875 7049.404222016231 7266.294288782523 8009.551039241368 8569.350787888869 7628.367045942921 8107.940462679042 8522.845474384629 7219.671316536968 7175.78417683862 7331.772998406342 1.009216393431689 0.9614869723255907 0.991069184815453 1.0924439478666825 1.1687965229899413 1.0404532502030612 1.1058635427530845 1.1624535397150433 0.9847101537522043 0.9787242701592604 1.0 12.83994640344452 GAPVNISSS(ph)DLTGR ddPTM_A549_PD325901_60min_R1 1 GAPVNISSSDLTGR 14 0 H7BYT1;P48730-2;P48730;J3KRM8 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.139)S(0.172)S(0.688)DLT(0.001)GR 141.82 6.2068e-13 35468000.0 3507.6 4018.0 4318.1 3877.6 4671.5 3658.4 3720.7 4532.6 3972.7 4334.1 4524.4 True False 3863.6889698413543 4356.610961172224 4611.152232844708 4117.11054533145 4343.389955800106 3628.6072033386527 3862.293274545164 4442.193737244086 3805.741234436389 4060.4441863378647 3967.927482534645 0.9737297334308376 1.0979562959122666 1.1621059742501094 1.0375972251139804 1.0946243284228625 0.9144842538857992 0.9733779892766579 1.1195249300288341 0.9591257025708911 1.023316127678856 1.0 11.95416994407043 -7.236528991823956 24.91180025431004 0.9870693115375484 1.0775389056325944 0.24102756580621743 0.06431066010246056 683.1044059144504 683143.6018720347 0.009149263134086495 0.015842391892937645 5.8005744883297096e-08 7.236528991823956 0.09046959409504596 GAQASSGS(ph)PALPR ddPTM_A549_MK2206_60min_R1 2 GAQASSGSPALPR 13 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 GAQASS(0.006)GS(0.993)PALPR;GAQASS(0.002)GS(0.998)PALPR 157.82 1.968e-18 159484000.0 5593.299999999999 6047.2 5714.299999999999 5400.200000000001 7475.6 5597.299999999999 5177.799999999999 5539.6 8087.5 7784.1 8553.9 True False 6537.3122969442375 6354.976650320434 6524.6736652851305 6723.249242424192 6375.9491428674355 6189.602570812966 6118.539237471206 6324.8552643134935 6255.694163083666 6025.666403707759 6429.730554369982 1.0167319208269368 0.9883737112438185 1.0147662658819536 1.0456502314633882 0.9916355108432975 0.9626534920046047 0.9516011885307893 0.9836890070012017 0.9729325529561994 0.9371569077046937 1.0 12.650542565602688 -6.984781164811469 24.82123955207449 0.9819239231300633 1.014812015043322 0.4542542367618253 0.02207276368597854 183.7203772940544 299637.63133497234 0.0028810813336012497 0.005443511388529234 1.035663892424949e-07 6.984781164811469 0.0328880919132587 GAQASSGS(ph)PALPR ddPTM_A549_PD325901_60min_R1 2 GAQASSGSPALPR 13 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 GAQASS(0.001)GS(0.999)PALPR;GAQASS(0.001)GS(0.999)PALPR 178.67 2.4653999999999997e-22 195181000.0 15468.900000000001 14284.2 14036.5 14614.6 16876.699999999997 15094.400000000001 15060.2 15795.0 15716.1 15542.3 16893.9 True False 17039.29134039769 15487.979664404258 14989.101298331383 15517.310649835215 15691.338813454286 14971.47621093238 15633.324152257657 15479.956334062199 15055.606971209947 14560.95652553449 14816.057399255604 1.1500557051873859 1.0453509491116317 1.0116794835773566 1.0473306245840304 1.0590765404460878 1.0104898899544346 1.0551608792392446 1.0448094197340212 1.0161682400046843 0.9827821351627639 1.0 13.854873972451719 -2.2168931605577913 1.082395198219453 1.018758568910755 137.4321450382701 0.6810805804107412 0.02401968450259421 578.7508839179197 0.855962674358581 0.0035670056045282402 195874.38205522276 0.006068856092774604 2.2168931605577913 136.41338646935935 GAQLSVPS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 GAQLSVPSPAR 11 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 GAQLS(0.002)VPS(0.998)PAR 70.41199999999999 0.0030531 6597000.0 2375.2 3096.0 2389.6 2991.2 2852.5 2474.3 2691.5 2676.6 3985.0 3094.8 3174.5 True False 2616.328555470175 3356.9107854129443 2551.772625832128 3175.959630491911 2652.1502405907763 2454.150121151551 2793.9265053453128 2623.213113247919 3817.524308210791 2899.3937998381284 2784.056624813508 0.9397540740197524 1.2057623955970398 0.9165663525263466 1.1407668946764526 0.9526207969165974 0.881501510881067 1.0035451436022664 0.9422269252241365 1.3712092901366584 1.0414277403687313 1.0 11.442972839062401 -8.724579725831804 24.999980565132898 1.1752935128136903 1.0016331503205562 0.17545003008503002 0.12773906395490947 195.24156664535653 132422.0771255102 0.026085637204215636 0.02957794311473089 1.8854728110819225e-09 8.724579725831804 -0.1736603624931341 GAQPGRHS(ph)VTGYGDCAVGAR ddPTM_A549_MK2206_60min_R1 2 GAQPGRHSVTGYGDCAVGAR 20 1 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GAQPGRHS(0.988)VT(0.012)GYGDCAVGAR;GAQPGRHS(0.961)VT(0.039)GYGDCAVGAR 191.41 1.371e-44 78177000.0 2893.3 2571.5 1973.4299999999998 1490.73 2001.9099999999999 2449.5 1688.02 2155.2599999999998 2754.8 2826.5 4945.5 True False 3381.61830560649 2702.378366235449 2253.292048244516 1855.958916921412 1707.43169091414 2708.7044641534953 1994.7113839152062 2460.7747052069276 2130.8421985116397 2187.991686910495 3717.3958611436597 0.909673984671122 0.7269546927950956 0.606147995105178 0.4992631902135989 0.4593085468139644 0.7286564480437551 0.5365883694994839 0.6619619747598977 0.5732083098236637 0.5885818375655472 1.0 11.86007661195229 -10.745329826980214 0.8538835892978333 1.015394960695823 0.6242101739467817 0.0 0.1695804677010771 0.3970915786897868 0.481174106056022 0.10264164888164265 0.022527331321729748 1.7975052728167186e-11 10.745329826980214 -0.39118478674904134 GAQPGRHS(ph)VTGYGDCAVGAR ddPTM_A549_PD325901_60min_R1 2 GAQPGRHSVTGYGDCAVGAR 20 1 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GAQPGRHS(0.714)VT(0.286)GYGDCAVGAR;GAQPGRHS(0.995)VT(0.005)GYGDCAVGAR 148.28 1.6389000000000001e-21 88907000.0 7969.1 6083.200000000001 3975.4 4083.2 3891.7000000000003 3921.8999999999996 3883.8999999999996 3543.8999999999996 3910.8 5393.700000000001 9379.0 True False 8778.117165458647 6595.852612992259 4245.194550022197 4335.409990379973 3618.3604176361523 3889.961346701802 4031.703939851631 3473.21413436423 3746.442676173343 5053.140861505399 8225.442458379559 1.0671908787734643 0.8018842325342418 0.5161053124500874 0.5270731650384756 0.43989857517634157 0.4729181884603613 0.49015040348916267 0.42225255990040267 0.45547004858768475 0.6143305830749055 1.0 13.005877570238388 -10.803741629440625 1.054149311145973 0.9996093983538816 0.5608075242009659 0.04685079919255186 0.21510973760101998 0.41688655520824314 0.8235508146050436 0.13446236586353252 0.03367384582436388 1.571297322839207e-11 10.803741629440625 -0.4388018741529157 GARAS(ph)PIQPALDPSR ddPTM_A549_PD325901_60min_R1 1 GARASPIQPALDPSR 15 1 Q99500 Q99500 S1PR3 Sphingosine 1-phosphate receptor 3 1 GARAS(1)PIQPALDPSR 73.918 0.00021102 8589200.0 2046.7 1808.2 1805.9 2290.4 2420.4 1948.1 2019.4 2161.8 2362.1 2243.2 2583.4 True False 2254.479477299095 1960.5833598784525 1928.4592337588886 2431.87280612419 2250.3994539266996 1932.235319490496 2096.2493720580806 2118.6812031007066 2262.8291514240173 2101.5639691730917 2265.6581775218824 0.9950660252576077 0.8653482592077889 0.8511695422070186 1.0733626238288552 0.9932652137261622 0.8528362039166582 0.9252275532361652 0.9351283543654695 0.9987513446971249 0.9275732720951434 1.0 11.145714501163456 -8.76151183136253 8.330470846474162 0.9994483510522912 0.9344697395688005 0.030274402590461436 0.06745539805161428 0.14999409065661037 93.23524621315394 0.011030837113221639 0.012107555016082452 1.7317618522059838e-09 8.76151183136253 -0.06497861148349071 GARPPAAGPGGDEDEDEEDT(ph)APESALDTSLDK ddPTM_A549_MK2206_60min_R1 2 GARPPAAGPGGDEDEDEEDTAPESALDTSLDK 32 1 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 GARPPAAGPGGDEDEDEEDT(0.997)APES(0.003)ALDTSLDK;GARPPAAGPGGDEDEDEEDT(0.999)APES(0.001)ALDTSLDK 127.49 5.7288999999999996e-30 31519000.0 1317.33 1650.04 969.77 1439.28 1554.72 1553.09 1524.03 1653.77 1769.4299999999998 1943.98 1923.5900000000001 True False 1539.6630983736898 1734.0199881093297 1107.2979683222031 1791.9036646117333 1326.0227475251309 1717.4369529422936 1800.926523636148 1888.1969619582146 1368.6569301990876 1504.8335678472538 1445.9095146167892 1.0648405607744742 1.1992589927516306 0.765814151666103 1.2392917029020611 0.917085567333422 1.1877900626426596 1.245531968239001 1.3058887453677523 0.9465716328464884 1.0407522411567236 1.0 10.497761555555373 GARPPAAGPGGDEDEDEEDTAPESALDT(ph)SLDK ddPTM_A549_PD325901_60min_R1 1 GARPPAAGPGGDEDEDEEDTAPESALDTSLDK 32 1 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 GARPPAAGPGGDEDEDEEDTAPESALDT(0.625)S(0.375)LDK 143.16 2.8468e-40 17035000.0 904.07 1197.3 1386.9 1116.0 1050.5 1115.1 1050.0 1081.1 1392.8 1480.2 1360.1 True False 995.8505208588424 1298.2006729247155 1481.0233741072052 1184.9327853801055 976.7165040282594 1106.0189953102263 1089.9583245820468 1059.536612393457 1334.2654595924696 1386.7399193874878 1192.8163223842664 0.8348733180212373 1.0883491855056118 1.241618970426943 0.9933908206517472 0.8188322759332678 0.9272332835783594 0.9137687874721386 0.8882646829275419 1.1185841730648578 1.162576243604377 1.0 10.220156189231862 -11.791398762610033 5.789731109688582 0.9989340905990977 1.0179780416233484 0.0 0.13524920632776333 2.14164583330024 162.02430716646708 0.14044604598401098 0.018605506152429414 1.6165950229434831e-12 11.791398762610033 0.019043951024250716 GARPPAAGPGGDEDEDEEDTAPESALDTS(ph)LDK ddPTM_A549_MK2206_60min_R1 2 GARPPAAGPGGDEDEDEEDTAPESALDTSLDK 32 1 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 GARPPAAGPGGDEDEDEEDTAPES(0.001)ALDT(0.396)S(0.604)LDK;GARPPAAGPGGDEDEDEEDTAPESALDT(0.147)S(0.852)LDK 125.93 1.5855000000000002e-22 30590000.0 1427.62 1140.76 1112.42 1078.18 2099.4 1429.63 1123.87 1393.28 2095.29 1657.79 1703.6399999999999 True False 1668.567354042074 1198.8198114200854 1270.1778833341777 1342.33414840134 1790.5810410583645 1580.9124976884111 1328.0626313910857 1590.7817067410472 1620.7101604905795 1283.2940876148418 1280.5791699279707 1.3029786781054127 0.9361543898043538 0.9918776700120946 1.0482242565891828 1.3982587590887332 1.2345292933175958 1.037079676585545 1.242236125729364 1.265607155379343 1.0021200701609287 1.0 10.322580732858473 -4.932112590621139 17.938592339770906 1.1308688068378177 4.145002955741959 0.11884854433940895 0.14121602733336908 181.66986545772642 51926.1374459202 0.020299151691510548 1742.1163620323834 1.1691962382018571e-05 4.932112590621139 3.0141341489041418 GARPPAAGPGGDEDEDEEDTAPESALDTS(ph)LDK ddPTM_A549_PD325901_60min_R1 1 GARPPAAGPGGDEDEDEEDTAPESALDTSLDK 32 1 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 GARPPAAGPGGDEDEDEEDTAPESALDT(0.352)S(0.648)LDK 168.18 8.290499999999999e-63 17692000.0 1357.2 1596.6 1263.3 1380.0 1870.6 1408.2 1087.6 1538.3 1432.0 1365.9 1686.9 True False 1494.9819448821665 1731.1510852681874 1349.035134840027 1465.2394657926045 1739.2155092196685 1396.7320860872214 1128.9892131575566 1507.617399726996 1371.8180199141414 1279.656840894048 1479.421994140151 1.010517587817166 1.170153676317583 0.9118663506311426 0.9904134666080928 1.1756047403029932 0.9441066116493764 0.7631285851024082 1.0190583928713541 0.927266206226338 0.8649708101965811 1.0 10.530817913850873 GARS(ph)PEDGPSAR ddPTM_A549_MK2206_60min_R1 1 GARSPEDGPSAR 12 1 H0YEB0;Q8TDY4-2;Q8TDY4-3;Q8TDY4 H0YEB0 ASAP3 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 1 GARS(0.996)PEDGPS(0.004)AR 45.257 0.042509 4081000.0 182.39 215.35 229.97 267.41 297.73 202.26 339.95 236.78 447.96 491.31 547.38 True False 213.17297299262685 226.31039516578025 262.58320403297364 332.925462004491 253.93431140054625 223.66301895067804 401.71451461592517 270.34429010833804 346.4977752451262 380.322729770386 411.450439080541 0.5181012164405504 0.5500307538169383 0.6381891452583266 0.8091508244552419 0.6171686484719946 0.5435965008337158 0.9763375523759982 0.6570518935706335 0.8421373325531915 0.9243463942347093 1.0 8.68457485225913 -6.4611116804223645 0.0953414210746644 1.2974795992875001 3.7371469996200325e-12 0.5839218435313236 0.11147307636795806 14.840901930662914 0.334467846360369 1.37666765632395 3.3806249463344127 3.4585042968070057e-07 6.4611116804223645 -1.2974795992837629 GARS(ph)PEDGPSAR ddPTM_A549_PD325901_60min_R1 2 GARSPEDGPSAR 12 1 H0YEB0;Q8TDY4-2;Q8TDY4-3;Q8TDY4 H0YEB0 ASAP3 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 1 GARS(0.982)PEDGPS(0.018)AR;GARS(0.999)PEDGPS(0.001)AR 59.57 0.0080742 10475600.0 713.22 616.24 655.38 521.74 881.44 923.22 795.58 719.86 600.19 933.4399999999999 817.88 True False 785.6255693551865 668.1727074944685 699.8580279200957 553.966694842488 819.5306952029212 915.7016024126157 825.8562322580804 705.5018275807545 574.966101516947 874.5024390981334 717.2859449684901 1.0952752871655649 0.9315290675656845 0.9757029714988211 0.7723094237777424 1.1425439198295215 1.2766200269724257 1.1513626302748197 0.9835712417475945 0.8015856236276941 1.2191824546855574 1.0 9.486404551588333 -8.527017928628888 24.4449909366515 0.9055818983674698 1.0453453344549994 0.0 0.1615539137273817 128.00300481938996 755948.9508560534 0.025204828681982618 0.028642160619318596 2.9715433573776926e-09 8.527017928628888 0.1397634360875296 GARVS(ph)DFGGR ddPTM_A549_MK2206_60min_R1 2 GARVSDFGGR 10 1 I3L4R8;P27694 I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed 1 GARVS(1)DFGGR;GARVS(1)DFGGR 96.745 0.00014776 16691700.0 3032.7 3236.1 2611.0 2942.6 4178.4 2820.6 3234.8 2423.7 4731.4 4788.4 4884.3 True False 3544.545617603705 3400.8036674993346 2981.2790613127577 3663.537132098334 3563.7628950930102 3119.074019837252 3822.5212880705853 2767.2668972699494 3659.7454544932366 3706.69711431177 3671.393510177731 0.9654496604021383 0.9262977825917393 0.8120292888921173 0.9978601100487818 0.970683988304073 0.8495613480795902 1.0411636010887697 0.7537374813129162 0.9968273475310657 1.0096158594920897 1.0 11.842112039458092 -8.934449904293494 24.99999999476303 0.9986051834917544 0.9155784558881084 0.19338873370462983 0.07953097602023709 64.95089860020914 24771.047387120645 0.01254353004980478 0.013353525532304341 1.1629206857343676e-09 8.934449904293494 -0.08302672760364604 GARVS(ph)DFGGR ddPTM_A549_PD325901_60min_R1 1 GARVSDFGGR 10 1 I3L4R8;P27694 I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed 1 GARVS(1)DFGGR 111.79 4.2139e-05 17352000.0 2171.6 2658.1 2102.4 2458.5 3079.0 3231.8 2906.6 3232.3 3134.2 2619.2 3098.0 True False 2392.059233352574 2882.10741560276 2245.0815067582316 2610.3559613413886 2862.7416619733563 3205.481292299876 3017.212253552551 3167.8292408097054 3002.480473474094 2453.8232650045315 2716.965639840054 0.8804157101866747 1.0607816946011976 0.8263194329135491 0.9607614918144709 1.0536539807481275 1.179801925094857 1.1105080643309764 1.1659437993467572 1.1050859199127923 0.9031484347917579 1.0 11.407780605265843 -6.7424265980323375 4.075526264160896 1.0750779072928032 0.9307932942794008 0.37479880448673863 0.08906209566423043 0.1642501139840353 6.073686745394908 0.01158875975437931 0.02408172564415704 1.8095617261754616e-07 6.7424265980323375 -0.14428461301340234 GAS(ph)FLK ddPTM_A549_MK2206_60min_R1 1 GASFLK 6 0 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-5;A0A1W2PRU6;A0A1W2PNW8 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 GAS(1)FLK 77.058 0.044842 17197000.0 2041.8 2233.8 2075.6 1666.2 2441.0 2003.6 1648.2 1947.7 2707.9 2576.5 2572.7 True False 2386.4059227827483 2347.4908786687715 2369.951290563291 2074.4190747985613 2081.932133573146 2215.6196221179594 1947.6566053536344 2223.7924395810883 2094.5649736277296 1994.4668605430368 1933.8275870921634 1.2340324125643036 1.213909085969045 1.2255235711715713 1.0727011490811345 1.076586220751811 1.1457172484800042 1.0071511123089651 1.1499434874258547 1.0831187783277318 1.0313571250382536 1.0 10.917243459861988 -2.0000000000000004 0.16846796072081738 1.001424987793261 1.983926070013463 0.6536272547944371 0.048404740523395 23.967099368285535 0.24191806775175279 0.06165396175382768 5.981338736340296 0.00999999999999999 2.0000000000000004 0.982501082220202 GAS(ph)FLK ddPTM_A549_PD325901_60min_R1 2 GASFLK 6 0 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-5;A0A1W2PRU6;A0A1W2PNW8 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 GAS(1)FLK;GAS(1)FLK 87.323 0.038897 80050000.0 5361.1 5409.0 5880.3 6062.5 7255.1 6914.3 7189.1 6746.2 6323.1 6586.5 7151.2 True False 5905.354925366774 5864.835412887153 6279.372519116448 6436.96685606352 6745.526804736248 6857.9922332288625 7462.6851345264695 6611.641748708483 6057.362096172559 6170.627265940879 6271.6477351917965 0.9415954426506353 0.9351346983310436 1.0012316992680097 1.0263597586873505 1.0755589423311191 1.0934912997021404 1.1899082106686991 1.0542112739541944 0.9658326411069252 0.9838925154096161 1.0 12.61462881334924 -5.841492277355183 3.7558654433978766 1.019788524987718 0.9372661465741384 0.2350198522010577 0.0627966594271438 0.3232322532881345 8.754156328013915 0.010540029507338428 0.03835033349568151 1.4404816247303519e-06 5.841492277355183 -0.08252237841357968 GAS(ph)GSIFSK ddPTM_A549_MK2206_60min_R1 1 GASGSIFSK 9 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 GAS(0.977)GS(0.023)IFSK 45.158 0.049919 3089900.0 1167.5 1422.4 1392.4 1237.3 2333.9 1487.1 1648.9 1410.6 2340.1 2168.4 2174.9 True False 1364.5454573654918 1494.7940844383827 1589.8632573618845 1540.4385555445072 1990.5864016986343 1644.4639349429108 1948.483786292687 1610.5568697813223 1810.0710863718182 1678.5569339807955 1634.8123058136373 0.8346801969332894 0.9143521119352179 0.9725050708929048 0.9422724248321823 1.2176238181103793 1.0059038148262958 1.191870026524505 0.985163167694506 1.1072042215090592 1.0267581960397507 1.0 10.674909292852828 -6.549659154642753 24.998962362217913 1.064336904946165 0.9161450790353395 0.4943757360260519 0.07783997307903609 146.51960860972864 136772.59477817838 0.01088719917648614 0.022663954822952935 2.8205957381046316e-07 6.549659154642753 -0.14819182591082558 GAS(ph)GSIFSK ddPTM_A549_PD325901_60min_R1 2 GASGSIFSK 9 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 GAS(0.931)GS(0.068)IFS(0.001)K;GAS(0.714)GS(0.029)IFS(0.257)K 99.28299999999999 0.00081049 13595300.0 5938.6 6688.299999999999 7003.3 7396.2 8088.799999999999 8933.5 7135.1 7145.6 8933.1 7975.4 8045.1 True False 6541.482300233743 7251.946513590889 7478.586052264035 7853.046476011057 7520.670592845107 8860.748537892488 7406.630134976537 7003.075402385242 8557.672872692048 7471.83188290972 7055.603702090771 0.9271328969759627 1.027827925120275 1.059949845262415 1.1130226140229478 1.06591454259492 1.2558455536932727 1.0497514383895665 0.9925550949396488 1.2128902407254212 1.0589925679493037 1.0 12.784553814791552 -5.261572450715211 1.2446544732943883 1.1004847935123174 0.8487737300041772 0.28628773554139353 0.0766452092504018 1.6271879317478954 2.080501637606758 0.01326420273497072 0.5241880035993218 5.475547481034801e-06 5.261572450715211 -0.2517110635081402 GAS(ph)PLGPGSAAGSGAAASGGLGLGLGGR ddPTM_A549_PD325901_60min_R1 1 GASPLGPGSAAGSGAAASGGLGLGLGGR 28 0 B4E1M0;E9PPE2;Q6P1R3-3;Q6P1R3;A0A6I8PS01 B4E1M0 MSANTD2 Myb/SANT-like DNA-binding domain-containing protein 2 1 GAS(0.986)PLGPGS(0.013)AAGS(0.001)GAAASGGLGLGLGGR 72.316 7.6862e-05 9247800.0 1168.8 1354.7 1394.3 1310.8 1787.9 1115.3 1043.1 1251.3 1546.5 1239.8 1701.5 True False 1287.4557155749164 1468.8653233200628 1488.925582607021 1391.7651389572065 1662.3240719201567 1106.2173665765367 1082.7957413062222 1226.3418398741396 1481.505983098618 1161.5188164144076 1492.2262866971764 0.8627751213420255 0.9843448922020938 0.997788067319561 0.932677001715118 1.1139892700854819 0.741320117758404 0.7256243580206803 0.821820290130706 0.9928158995092585 0.7783798119421008 1.0 10.543250612441284 -8.872084486692732 10.878882791350165 0.9968179891168121 0.9012519681560062 0.0 0.12591819412404667 0.5515395454537956 51.317935093211176 0.019795086719059902 0.021059673475590894 1.3425037680042199e-09 8.872084486692732 -0.09556602096080591 GAS(ph)S(ph)SPQR ddPTM_A549_PD325901_60min_R1 1 GASSSPQR 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 GAS(0.995)S(0.554)S(0.45)PQR 46.818999999999996 0.042866 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GAS(ph)SS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 GASSSPQR 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 GAS(0.996)S(0.161)S(0.842)PQR 46.475 0.044297 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GAS(ph)SSPQR ddPTM_A549_PD325901_60min_R1 2 GASSSPQR 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 GAS(0.947)S(0.026)S(0.026)PQR;GAS(0.641)S(0.154)S(0.205)PQR 54.982 0.021818 4617200.0 1018.78 1053.49 1046.96 877.1 852.9300000000001 591.9200000000001 561.3 1218.5700000000002 1082.8899999999999 1323.17 1428.74 True False 1122.2057956138037 1142.2712995234767 1118.0130014819242 931.2764749613717 793.0231392487613 587.0995997704506 582.6605786551456 1194.264665400328 1037.3798991514136 1239.6248203863947 1253.0140375290766 0.8956051265209888 0.9116189167170203 0.8922589595936433 0.7432290836883471 0.6328924620929148 0.4685498982343418 0.4650072235456698 0.95311355629774 0.8279076435545047 0.989314391745295 1.0 10.291186861939693 -9.474252071824912 0.8927733210128107 0.9663247443027931 0.7359439194742117 0.2621715245393138 0.16035632571009314 0.5563206870515994 0.9416026723289814 0.05417831321284509 0.03799970811351501 3.3554280302371435e-10 9.474252071824912 -0.23038082482858147 GAS(ph)TVSSSSSTK ddPTM_A549_MK2206_60min_R1 1 GASTVSSSSSTK 12 0 Q5VTQ0-2;Q5VTQ0-3;Q5VTQ0-4;Q5VTQ0 Q5VTQ0-2 TTC39B Tetratricopeptide repeat protein 39B 1 GAS(0.438)T(0.438)VS(0.121)S(0.003)S(0.001)SSTK 147.18 6.0695e-12 8112600.0 3541.8 3201.7 3307.6 3046.9 3299.6 2683.9 2277.3 2411.3 3837.5 3758.6 4047.2 True False 4139.569251303721 3364.652854433612 3776.6674160084535 3793.3906367805375 2814.2332109536883 2967.908516571369 2691.0559321513365 2753.109159296545 2968.31237722826 2909.5296495389302 3042.168542962413 1.3607297534122411 1.1060047485591213 1.2414392439712751 1.2469363821264803 0.9250747193031044 0.975589772446095 0.8845847605572934 0.9049824559081178 0.9757225266479703 0.9563998866103844 1.0 11.570884368480653 -6.757865119797191 24.999939076880022 0.9692087947879202 1.2294839288365973 0.8188393511684818 0.06560869051304369 30.92407817503498 216293.16472146995 0.009230714117869136 0.018635179447453465 1.7463644426019221e-07 6.757865119797191 0.2602751340486771 GASAATGIPLES(ph)DEDSNDNDNDIENENCMHTN ddPTM_A549_MK2206_60min_R1 1 GASAATGIPLESDEDSNDNDNDIENENCMHTN 32 0 Q9Y4E8;Q9Y4E8-2;Q9Y4E8-3 Q9Y4E8;Q9Y4E8-2 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GASAAT(0.001)GIPLES(0.499)DEDS(0.499)NDNDNDIENENCMHT(0.001)N 49.088 0.0027372 1976800.0 157.23 512.53 207.5 281.6 349.07 224.08 304.64 354.82 375.24 360.41 515.45 True False 183.7665800955684 538.6155878073711 236.92662015411602 350.5920126415043 297.7222654102329 247.79199686773433 359.98914467596853 405.11682159067715 290.2487391351486 278.99313068438414 387.44953930371025 0.4742980993752562 1.3901567382821591 0.6115031665282127 0.9048714144080723 0.7684155876021245 0.6395465002050177 0.9291252360834108 1.0455989244914756 0.7491265563426859 0.720076041865389 1.0 8.597864618518454 -11.042084020024262 1.3000606394634642 1.0012168759483324 0.8364723651838847 0.0 0.24690927822296882 1.0679306062399891 3.1775763775565107 0.1567042992023099 0.03394030125936868 9.076449172509894e-12 11.042084020024262 -0.16474451076444774 GASAATGIPLES(ph)DEDSNDNDNDIENENCMHTN ddPTM_A549_PD325901_60min_R1 4 GASAATGIPLESDEDSNDNDNDIENENCMHTN 32 0 Q9Y4E8;Q9Y4E8-2;Q9Y4E8-3 Q9Y4E8;Q9Y4E8-2 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GASAAT(0.004)GIPLES(0.496)DEDS(0.496)NDNDNDIENENCMHT(0.004)N;GASAAT(0.002)GIPLES(0.498)DEDS(0.498)NDNDNDIENENCMHT(0.001)N;GASAAT(0.001)GIPLES(0.499)DEDS(0.499)NDNDNDIENENCMHTN;GASAAT(0.001)GIPLES(0.5)DEDS(0.5)NDNDNDIENENCMHTN 69.782 0.00012761 32882100.0 1333.27 1278.52 1126.43 1138.5900000000001 1350.8899999999999 1363.2299999999998 1555.71 1649.6499999999999 1069.95 1468.6 1340.1799999999998 True False 1468.622588898502 1386.2653673663303 1202.876313573856 1208.9181183744936 1256.0081467175007 1352.1283068574655 1614.9133953671765 1616.7464366246093 1024.9837223513518 1375.8723453671566 1175.3463561009817 1.2495232416174038 1.179452644040211 1.0234228466613027 1.028563292938501 1.0686281028548055 1.150408387994607 1.3739893666105252 1.3755489420054015 0.8720695112813953 1.1706101254539019 1.0 10.198870243662741 -8.784577366895919 24.999976559609088 0.9395883611842473 1.172435889502211 0.17602283094092797 0.13605328588471322 170.76266811123116 184503.6903760496 0.0229432244150374 0.02443221505391161 1.6421870880667595e-09 8.784577366895919 0.23284752831796363 GASAATGIPLESDEDS(ph)NDNDNDIENENCMHTN ddPTM_A549_MK2206_60min_R1 1 GASAATGIPLESDEDSNDNDNDIENENCMHTN 32 0 Q9Y4E8;Q9Y4E8-2;Q9Y4E8-3 Q9Y4E8;Q9Y4E8-2 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GASAATGIPLES(0.16)DEDS(0.839)NDNDNDIENENCMHTN 74.65 4.6476e-06 9652100.0 349.87 0.0 0.0 0.0 183.48 223.37 309.36 0.0 332.69 0.0 234.55 True False 408.91950249975554 0.0 0.0 0.0 156.49033505448625 247.00686513899407 365.5667075792988 0.0 257.33624619676107 0.0 176.30476174931655 2.3193900065001545 0.0 0.0 0.0 0.8876126401906038 1.4010220863473166 2.0734931033745374 0.0 1.4596103000477163 0.0 1.0 7.461927630169364 -6.99558960198804 23.288380414329957 1.2011732102458894 0.49036119042502857 0.012965788133039391 0.8453339750224871 75.16907172648622 396902.3189169705 0.10447818531934366 0.19675135865442436 1.0102070569431238e-07 6.99558960198804 -0.7108120198208608 GASAATGIPLESDEDS(ph)NDNDNDIENENCMHTN ddPTM_A549_PD325901_60min_R1 1 GASAATGIPLESDEDSNDNDNDIENENCMHTN 32 0 Q9Y4E8;Q9Y4E8-2;Q9Y4E8-3 Q9Y4E8;Q9Y4E8-2 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GASAATGIPLES(0.165)DEDS(0.835)NDNDNDIENENCMHTN 68.934 0.00015647 2072500.0 254.85 195.5 312.66 331.67 0.0 249.74 0.0 323.71 147.78 228.52 315.76 True False 280.72218438934584 211.97547110730966 333.8789877773157 352.15650262277745 0.0 247.70620024103312 0.0 317.25335010441785 141.56932051879312 214.09120820053286 276.92352176755816 1.013717370765551 0.7654657493675671 1.2056721857580748 1.2716742166754897 0.0 0.8944931750830135 0.0 1.1456352572704582 0.5112217251000528 0.7731058988200902 1.0 8.113343790594653 GASGGAGGRS(ph)LDSR ddPTM_A549_MK2206_60min_R1 2 GASGGAGGRSLDSR 14 1 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 GASGGAGGRS(0.995)LDS(0.005)R;GASGGAGGRS(1)LDSR 80.508 0.00014236 17818700.0 4680.4 3779.5 3990.0 3332.7 3111.0 2278.0 2504.8 2123.3 3197.1000000000004 6636.9 6265.1 True False 5470.337095206379 3971.8604064502747 4555.841997180352 4149.211649610589 2653.37602111678 2519.05644798598 2959.8897373436357 2424.284277333534 2472.9619547196035 5137.619680472761 4709.302762036426 1.1616023372514832 0.8434073167835014 0.9674132727049994 0.8810670834457798 0.5634328806605312 0.5349107023428398 0.6285197378271133 0.5147862432792938 0.5251227367786032 1.090951238448538 1.0 12.201297761439994 -6.5653688595926925 6.415231502014416 0.7087701010311177 0.9682921960677664 0.315708446343425 0.19379503551099722 0.21489119333923437 22.593386990947643 0.030953695610989544 0.0653805566372888 2.720389816292854e-07 6.5653688595926925 0.2595220950366487 GASGGAGGRS(ph)LDSR ddPTM_A549_PD325901_60min_R1 2 GASGGAGGRSLDSR 14 1 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 GAS(0.001)GGAGGRS(0.998)LDS(0.001)R;GASGGAGGRS(1)LDSR 94.92200000000001 1.4492000000000001e-05 33532000.0 4516.3 4146.6 5165.0 5151.7 4539.9 6481.2 4417.9 4729.1 4955.7 5402.799999999999 5797.7 True False 4974.791451275666 4496.048534493968 5515.527959668121 5469.908808640404 4221.0330858047555 6428.419256035015 4586.02560206764 4634.774390592819 4747.429162910969 5061.666285952381 5084.619654648375 0.9783999176276039 0.8842448088292437 1.084747401828927 1.0757754129435808 0.8301570958106717 1.2642871429248663 0.9019407376665983 0.91152823719188 0.9336842252440366 0.9954857255301269 1.0 12.311924144708447 GASGVEPGRCS(ph)GSEPSSSEK ddPTM_A549_PD325901_60min_R1 1 GASGVEPGRCSGSEPSSSEK 20 1 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;F8W0I9;F8VVA6;F8VP44 F8W126 MCRS1 Microspherule protein 1 1 GAS(0.003)GVEPGRCS(0.983)GS(0.012)EPS(0.001)SSEK 64.68 0.00049879 8723200.0 3101.2 3128.5 2982.4 2621.8 3562.5 2972.7 3218.5 3475.8 3046.7 3906.7 3976.3 True False 3416.0315410172248 3392.149674471703 3184.8035986281143 2783.742631460181 3312.2822899578036 2948.491316795545 3340.981778730776 3406.472442287651 2918.6577941846467 3660.0302952784054 3487.2403078424823 0.9795801950714106 0.9727318380792602 0.9132733386528552 0.798265214243997 0.9498290905013875 0.8455084985582036 0.9580589474196016 0.9768390307449728 0.8369534464317971 1.049549205727903 1.0 11.76787006919168 -11.12858330339504 1.4963531241065942 0.9998792785511773 0.9041774193523603 0.28592364526595404 0.06243472591205172 0.48102660394839536 1.9323057040823242 0.045236345349338604 0.009793209253663187 7.437323915679254e-12 11.12858330339504 -0.09570185919881702 GASIVEDKLVEDLR ddPTM_A549_PD325901_60min_R1 2 GASIVEDKLVEDLR 14 1 P00367 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial 0 ; 94.191 5.5313000000000004e-05 3188100.0 1048.77 865.6 1108.3400000000001 1110.9299999999998 1065.3400000000001 1052.17 1117.04 1174.1399999999999 1284.06 1135.79 1193.11 False True 1155.2403583363325 938.5471498234638 1183.558617389848 1179.5496229949115 990.5141936234803 1043.6014763658516 1159.5495684677417 1150.720856604989 1230.0954236389334 1064.0760255648656 1046.3650337474394 1.1040509966191896 0.8969595882444218 1.131114457400268 1.127283103842343 0.9466239425796411 0.9973588974282804 1.108169263182414 1.0997317565972278 1.1755891911195504 1.0169262076294696 1.0 10.031170521052209 -7.7710906438968115 24.954511554555893 1.088273642809588 1.0323706370603196 0.07072473453087913 0.08081690328292604 408.1421256755666 1055298.6669814936 0.014076078071625718 0.01957943390788014 1.6939842031513216e-08 7.7710906438968115 -0.05590300574926843 GASLS(ph)NGQGSR ddPTM_A549_MK2206_60min_R1 2 GASLSNGQGSR 11 0 O43639 O43639 NCK2 Cytoplasmic protein NCK2 1 GAS(0.051)LS(0.949)NGQGSR;GAS(0.004)LS(0.996)NGQGSR 91.62 0.00029566 9438200.0 1778.77 1983.46 2031.8200000000002 1672.65 2651.5 1700.24 1469.51 1635.18 2761.3 3420.9 2587.1 True False 2078.9828892488363 2084.4096419573652 2319.9626282483673 2082.4493250881105 2261.46786242081 1880.1582682720305 1736.5009453544594 1866.9717725287285 2135.869958890005 2648.116314081767 1944.65166967238 1.0690772654411098 1.0718678694311001 1.1929964961998654 1.070859813901245 1.1629166794698018 0.9668354994335747 0.8929624633737165 0.9600545957123836 1.0983303550963655 1.3617432650691121 1.0 10.925296044274015 -7.259110619032788 24.99940655774774 1.0225525235923327 1.113271030150789 0.051850538731258 0.12037520300232118 231.5938756627247 2486168.798700657 0.011048404494865065 0.018576213835521604 5.506674181883926e-08 7.259110619032788 0.09071850655845637 GASLS(ph)NGQGSR ddPTM_A549_PD325901_60min_R1 1 GASLSNGQGSR 11 0 O43639 O43639 NCK2 Cytoplasmic protein NCK2 1 GAS(0.281)LS(0.719)NGQGSR 57.106 0.013885 6425300.0 1828.2 2575.2 2323.3 2235.7 2453.7 2519.4 2342.9 2389.0 2439.4 2269.8 2181.2 True False 2013.7975181502932 2792.221141665187 2480.9731091378426 2373.7941113569022 2281.3605768054636 2498.8828417044083 2432.0603415840724 2341.3495208657573 2336.880501242008 2126.4844406335087 1912.9262277660182 1.0527314064286086 1.4596596048170871 1.296951797265705 1.2409229780539428 1.1926024870649172 1.3063142767521623 1.2713821925189017 1.2239622662291931 1.2216260446024092 1.1116395445719258 1.0 10.901565521708186 -10.483195988377402 0.4562105984117576 0.9506793881294046 1.2733886647889365 0.35758409573751215 0.09745204614035695 0.8868303817985094 0.27350812884347453 0.12854506433911475 0.023713699561326053 3.2870326022042405e-11 10.483195988377402 0.322709276659532 GASS(ph)PYGAPGT(ph)PR ddPTM_A549_MK2206_60min_R1 1 GASSPYGAPGTPR 13 0 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 2 GAS(0.142)S(0.834)PY(0.029)GAPGT(0.995)PR 61.167 0.011781 1791800.0 908.55 1211.1 918.02 800.74 1192.2 775.45 665.91 699.74 1110.2 1190.7 1317.0 True False 1061.8910280851537 1272.7398169736541 1048.2090401632847 996.921335946585 1016.8289592977903 857.5076042979499 786.8972273213435 798.930287863876 858.741472625098 921.7200430229349 989.952552649115 1.0726686094636873 1.2856573919303504 1.0588477572569264 1.0070395124279659 1.0271491866723854 0.8662108118245242 0.7948837802535131 0.8070389694192281 0.8674572032034304 0.9310749697613387 1.0 9.95121556981726 -6.406926523713488 1.3063554851084962 0.9117222944507387 1.1760766219854144 0.6372440877456371 0.0819058987262422 0.27041803099367356 0.861283372962481 0.01419627518892066 0.053571368149929646 3.9180815972161337e-07 6.406926523713488 0.2643543275346757 GASS(ph)PYGAPGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GASSPYGAPGTPR 13 0 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 2 GAS(0.119)S(0.774)PY(0.11)GAPGT(0.998)PR;GAS(0.181)S(0.788)PY(0.061)GAPGT(0.97)PR 58.268 0.018043 5960500.0 1797.97 1767.4499999999998 1267.6200000000001 1838.24 1911.72 2035.7 1543.48 1880.81 2198.5 1625.25 1932.92 True False 1980.498590804442 1916.3992143663147 1353.6483160182968 1951.7839098540553 1777.4473822759676 2019.1219341341841 1602.2179760246643 1843.2957690830983 2106.104690489692 1522.6314376331 1695.1830937894247 1.1683095460663315 1.1304968893256138 0.7985263190611118 1.151370561094391 1.0485282615122409 1.191093718154435 0.9451592467472375 1.0873726713275447 1.242405435852767 0.8982106081705891 1.0 10.72722538943161 GASSPYGAPGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 GASSPYGAPGTPR 13 0 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 GASSPYGAPGT(1)PR;GASSPYGAPGT(1)PR 123.28 6.4565e-06 16324400.0 4200.1 4835.4 4557.299999999999 3466.5 5589.8 4868.2 3720.0 4301.8 6765.7 5915.6 6415.299999999999 True False 4908.974197413959 5081.501206336724 5203.593667606522 4315.7926556171005 4767.547824763283 5383.3496927503775 4395.875847540057 4911.593323709979 5233.279752602802 4579.261851437369 4822.203956727312 1.0179938968706614 1.0537715227178797 1.079090331786391 0.8949834337878363 0.9886657361541541 1.1163670680582118 0.9115906102245017 1.0185370357174466 1.085246455679671 0.9496201099186147 1.0 12.235476956161696 -8.53770285382454 24.74710435548297 1.0408677172672327 1.0089426223142919 0.0 0.0696701972117296 575.4419590701283 960628.8593557712 0.011197476599522443 0.012699287107006152 2.899326641128757e-09 8.53770285382454 -0.031925094952940825 GASSPYGAPGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GASSPYGAPGTPR 13 0 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 GASSPYGAPGT(1)PR;GASSPYGAPGT(1)PR 145.81 1.8462e-12 23130000.0 8198.2 8414.0 7882.700000000001 9295.8 9695.4 9525.8 8133.200000000001 9224.3 9843.0 9626.5 11311.7 True False 9030.475228804144 9123.07730893557 8417.667424525831 9869.980453706443 9014.428551314219 9448.225043068924 8442.713376657812 9040.314100176634 9429.33293995454 9018.681147131232 9920.43261077428 0.9102904664657889 0.9196249464995381 0.848518180082556 0.9949143188561109 0.908672928388619 0.9524005064867327 0.8510428635429101 0.9112822449253094 0.9504961436574478 0.9091015987887783 1.0 13.276187319771218 -9.453158083638778 0.9436495840647231 0.9905743082557684 0.9127095825702042 0.019057736978613127 0.04641099801180587 0.33542837121718305 0.6313276101089011 0.011077457870154852 0.008033601453334647 3.5224263102361724e-10 9.453158083638778 -0.07786472568556424 GASSS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 GASSSPQR 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 GAS(0.027)S(0.118)S(0.856)PQR 56.659 0.01832 5160500.0 579.6 683.27 574.11 566.41 567.51 328.85 157.09 431.57 540.54 576.21 871.05 True False 638.4405653210312 740.8515608362735 613.0725570038853 601.3958592895572 527.6500554032152 326.17195462987024 163.0681459129464 422.9619977898845 517.8229835784847 539.8280022633862 763.9163720408905 0.8357466716093068 0.9698071516087596 0.8025388372892067 0.7872535283971712 0.690717040130371 0.4269733789818699 0.21346334740449543 0.5536757860809984 0.6778529725643411 0.7066585061152356 1.0 9.577270901012758 -10.365085989457624 0.9668823486987821 0.9806121089888781 0.6611347666598801 0.05435479954796729 0.21396361915232076 0.5748731807114239 1.039522875525212 0.10902711411669999 0.04169282642738834 4.314336453528271e-11 10.365085989457624 -0.31947734232899794 GAST(ph)VSSSSSTK ddPTM_A549_MK2206_60min_R1 1 GASTVSSSSSTK 12 0 Q5VTQ0-2;Q5VTQ0-3;Q5VTQ0-4;Q5VTQ0 Q5VTQ0-2 TTC39B Tetratricopeptide repeat protein 39B 1 GAS(0.139)T(0.388)VS(0.135)S(0.283)S(0.047)S(0.008)STK 122.39 1.1350999999999999e-05 7627700.0 2613.3 2358.4 2252.6 2368.9 2625.3 2284.8 1787.2 1858.3 2789.5 3089.8 2449.0 True False 3054.3611509492416 2478.43248645914 2572.0525520923456 2949.280606343963 2239.1218477138805 2526.5760194725062 2111.9111061084914 2121.71971580507 2157.6827039161517 2391.8120340407036 1840.8457110384845 1.6592162681717477 1.3463553580821126 1.3972124533138424 1.6021335132319003 1.2163549798264812 1.3725083011151313 1.147250469414457 1.1525787865231436 1.172114909455898 1.2993006527914823 1.0 10.846152998124724 -2.0000000008556396 0.11723682459455113 0.8706679234421846 3.104799514358226 0.4990197843979989 0.13416152356162764 29.030794346712035 0.22668897818694342 0.37520752593146284 10.62731629453742 0.009999999980298171 2.0000000008556396 2.2341315909160415 GASVT(ph)LR ddPTM_A549_PD325901_60min_R1 1 GASVTLR 7 0 Q96HA7;Q96HA7-2;A0A087X1F6 Q96HA7 TONSL Tonsoku-like protein 1 GAS(0.181)VT(0.819)LR 49.418 0.057932000000000004 2858600.0 1378.1 1710.6 1470.2 1523.0 2079.3 1602.2 1502.0 1679.2 1537.1 2262.5 2097.1 True False 1518.0036974964003 1854.758265351222 1569.9766130307976 1617.0722510160408 1933.2571411955832 1589.1522144077164 1559.1594319259375 1645.7070386930845 1472.5010324092366 2119.6453638793355 1839.1699946121935 0.8253743275191295 1.0084757095780672 0.8536332245686958 0.8792402310570622 1.0511573953789024 0.8640594502210789 0.8477516686839496 0.8948096388665244 0.8006334578765937 1.1525010575905372 1.0 10.844839118979303 GAT(ph)CINGVNGFR ddPTM_A549_PD325901_60min_R1 1 GATCINGVNGFR 12 0 Q04721;D2WEZ3 Q04721 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain 1 GAT(1)CINGVNGFR 56.225 0.017813 9713600.0 5043.8 4934.8 5103.1 4703.1 5797.5 5074.9 5367.9 5873.8 5259.4 5531.9 6403.6 True False 5555.842862950689 5350.672914682106 5449.427053433184 4993.599805484925 5390.303600289228 5033.57169697773 5572.178371927592 5756.642451093042 5038.365708056172 5182.614889920038 5615.997795764931 0.9892886473602954 0.9527555225746512 0.9703399558921908 0.8891741035316358 0.9598122713570327 0.8962916083716392 0.992197392977899 1.0250435738123282 0.8971452431579734 0.92283064887032 1.0 12.455326654058188 GAT(ph)SPGQK ddPTM_A549_PD325901_60min_R1 1 GATSPGQK 8 0 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 GAT(0.592)S(0.408)PGQK 55.111999999999995 0.022834 105800000.0 16214.0 17006.0 14959.0 15320.0 17489.0 13854.0 11387.0 14617.0 15179.0 17198.0 21544.0 True False 17860.033343884064 18439.15530256219 15974.207695774525 16266.28160575557 16260.632973774615 13741.177617279065 11820.338516205495 14325.452468185322 14541.079416394383 16112.115344970964 18894.224578668218 0.9452641609885506 0.9759149006506568 0.8454545265546158 0.8609128963207295 0.8606139355479581 0.7272686719725456 0.6256059076142656 0.7581921347732318 0.7696044553641761 0.8527534579620544 1.0 14.205657690977947 -5.766281284985698 24.184478752377927 0.8453269571983403 0.9605895484341845 0.20578707558242393 0.09556851131718731 122.82275078554959 613503.3025906323 0.017476121374509105 0.057037132529027965 1.7128475665763304e-06 5.766281284985698 0.11526259123584426 GATGGPGDEPLEPAREQGS(ph)LDAER ddPTM_A549_MK2206_60min_R1 1 GATGGPGDEPLEPAREQGSLDAER 24 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GATGGPGDEPLEPAREQGS(1)LDAER 53.55 0.0016277000000000002 1379300.0 307.17 401.66 201.43 250.71 406.77 406.15 276.5 515.55 537.22 456.48 509.43 True False 359.012786414525 422.1027783714292 229.99580288021014 312.13396125479966 346.9346718449607 449.1285234194499 326.73647092602846 588.6307913056577 415.5405277640563 353.36085096087123 382.9244714472577 0.9375550877112689 1.1023134060252082 0.6006296803412543 0.8151319242541322 0.9060133204172769 1.172890627026199 0.8532661015137856 1.5371981557640748 1.085176212931826 0.9227951653895319 1.0 8.580916050818034 -7.111986680273532 5.649742073785105 1.0750138972737564 0.8619579895607247 0.2356124215388834 0.1989654909364336 0.27839395252189225 12.151671102046986 0.028094836062183152 0.049217494113927555 7.727042834209091e-08 7.111986680273532 -0.21305590771303173 GATGGPGDEPLEPAREQGS(ph)LDAER ddPTM_A549_PD325901_60min_R1 2 GATGGPGDEPLEPAREQGSLDAER 24 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GATGGPGDEPLEPAREQGS(1)LDAER;GATGGPGDEPLEPAREQGS(1)LDAER 71.86 2.3636999999999997e-05 2892300.0 789.61 999.34 859.63 837.46 759.11 880.69 683.38 1006.05 1082.1999999999998 926.44 878.69 True False 869.770625919841 1083.557888984035 917.969661175123 889.1880021903432 705.7927323873317 873.5179526318385 709.3863998598846 985.9835435190433 1036.7188974518735 867.9444202927604 770.6167004748403 1.1286682800721861 1.4060918850011501 1.191214336010998 1.1538654711770995 0.9158804006614895 1.1335310435052761 0.9205437663403523 1.279473365827003 1.3453107061046896 1.1262984824465243 1.0 9.589869641579554 -11.192164436744148 1.631460850975132 1.000334224494728 1.1880039211426434 0.02149904730261254 0.15008867171725576 0.584928534847031 2.8079065522236264 0.11561701911214192 0.02442012519955852 6.424444227885367e-12 11.192164436744148 0.18766969664791544 GATKES(ph)SEKDR ddPTM_A549_MK2206_60min_R1 1 GATKESSEKDR 11 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 GAT(0.057)KES(0.898)S(0.045)EKDR 41.967 0.017105000000000002 27243000.0 4147.6 3193.5 1811.1 1066.3 474.42 334.39 302.15 401.83 555.07 4416.4 4368.9 True False 4847.613480915728 3356.0355094586457 2067.9412133066003 1327.5435478680263 404.63344646037365 369.77492784988226 357.04674390705054 458.7906330527639 429.34753126464886 3418.7321726769883 3283.9815544940916 1.4761390709645807 1.021941035224741 0.6297054898120991 0.4042481743088045 0.1232142872138357 0.11259957515408375 0.10872373610577565 0.13970560596630457 0.13073993386993651 1.0410326964225765 1.0 11.681230308454225 -5.5681852781600725 1.7679662874207673 0.43836432097237155 1.5409606965528693 0.5189489401543685 0.3281446081338817 0.4000669438693367 1.880033148549798 0.05696856920592736 0.6019912988127858 2.7028050508570975e-06 5.5681852781600725 1.1025963755804977 GATKES(ph)SEKDR ddPTM_A549_PD325901_60min_R1 2 GATKESSEKDR 11 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 GAT(0.011)KES(0.816)S(0.173)EKDR;GAT(0.003)KES(0.499)S(0.499)EKDR 86.214 7.403e-05 122943000.0 10574.2 9209.2 6412.700000000001 6111.2 6767.299999999999 4474.700000000001 3651.6099999999997 4346.8 6063.9 8021.4 11457.900000000001 True False 11647.684999685396 9985.291603690217 6847.9043846977265 6488.674944457796 6291.988193917597 4438.259526782058 3790.5740167876647 4260.099664001368 5809.055370780277 7514.927435059312 10048.650937612449 1.1591292275948912 0.9936947422777842 0.681474998705128 0.6457259770234889 0.6261525286311287 0.44167715192190615 0.3772221804022881 0.4239474224401275 0.5780930601377327 0.7478543619154566 1.0 13.294714207694156 -5.627436679647213 3.1182635684490188 0.6912551329546578 1.1375958961512038 0.4662888585902938 0.1789507094570649 0.24953225724496855 4.576280937212818 0.034194415112635636 0.17954641759962361 2.3581059839308965e-06 5.627436679647213 0.44634076319654603 GATS(ph)PGQK ddPTM_A549_MK2206_60min_R1 2 GATSPGQK 8 0 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 GAT(0.089)S(0.911)PGQK;GAT(0.089)S(0.911)PGQK 100.84 0.0023426 78164000.0 8962.7 8681.5 6471.8 4816.9 8644.8 5010.799999999999 4680.3 5175.6 8058.7 10441.6 11444.7 True False 10475.384643023282 9123.351268315391 7389.598555727263 5997.040716238858 7373.161371697311 5541.0395301001545 5530.649927215519 5909.257149610245 6233.417317099512 8082.83530799385 8602.665132348768 1.2176906205069509 1.0605261425332804 0.8589894459497224 0.6971142807463317 0.8570787376079385 0.6441073138211642 0.6428995947335564 0.6869100515594349 0.7245914168691598 0.9395733977369185 1.0 13.070567965124386 -5.626913485730035 2.435121418858138 0.8106591200479208 1.2088510872882199 0.5924515840529122 0.11566886573301625 0.22297614019048062 2.4054255994370877 0.020544912575212813 0.13319002312294123 2.360948502551828e-06 5.626913485730035 0.39819196724029904 GATS(ph)PGQK ddPTM_A549_PD325901_60min_R1 1 GATSPGQK 8 0 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 GAT(0.188)S(0.812)PGQK 72.638 0.0055613 112070000.0 14179.0 12105.0 12069.0 10653.0 12942.0 10502.0 9895.8 11283.0 12232.0 13496.0 16094.0 True False 15618.441641971885 13125.130832501196 12888.074916792753 11311.01161528161 12032.998567476192 10416.475193927005 10272.390084189543 11057.951713657725 11717.931577925825 12643.860256758238 14114.540028271726 1.1065498139286023 0.9299014212444244 0.9131062642479078 0.8013730233238499 0.8525250233712072 0.7379960787289265 0.7277878034717197 0.7834440011157581 0.8302028655878659 0.895803917905388 1.0 13.784894493831631 -5.172130369571254 1.7030170523061288 0.8711156122622846 1.2256214642550254 0.45439092983434715 0.08051639598663185 1.2101972651013964 2.8378365115235504 0.015184997946650413 0.7458823294282515 6.7277466773838844e-06 5.172130369571254 0.35450585199274076 GATVYS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 GATVYSPSR 9 0 E7EWN3;Q9C0A6;H0Y3R4;Q9C0A6-2;Q9C0A6-3 E7EWN3 SETD5 SET domain-containing protein 5 1 GATVYS(0.999)PSR 90.14200000000001 0.0010702 17358000.0 5652.7 6473.2 6204.4 6470.7 7645.9 6981.4 6981.6 7554.1 7811.3 7652.8 7785.1 True False 6226.5579427022 7018.719281697373 6625.467894088074 6870.38044297406 7108.8783609230495 6924.545793075791 7247.288608478108 7403.4275494231915 7483.018225527466 7169.600901964979 6827.582053814977 0.9119711625029905 1.0279948635367326 0.9703974030434435 1.0062684547504148 1.0411999892335084 1.0142017684293716 1.0614722095399227 1.0843410582354633 1.095998285563812 1.0500937001495128 1.0 12.73715903205186 -3.1742276256237005 0.4893112099786302 1.0485222642087186 5.729353031000117e-09 0.5781992200960504 0.03255079305743491 19.39059766592931 0.6010220043501422 0.007941438156863203 18.22493417231122 0.0006695335965551444 3.1742276256237005 -1.0485222584793656 GAVAAEGAS(ph)DT(ph)EREEPTESQGLAAR ddPTM_A549_PD325901_60min_R1 2 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 2 GAVAAEGAS(1)DT(0.999)EREEPT(0.001)ESQGLAAR;GAVAAEGAS(1)DT(1)EREEPTESQGLAAR 94.463 7.5985e-09 13910200.0 973.6600000000001 966.76 1193.63 1323.99 1199.0700000000002 1138.2 1153.51 1103.51 1176.5900000000001 813.52 1528.92 True False 1072.5052464293926 1048.2322580445145 1274.6369096802835 1405.7698553005428 1114.851459766934 1128.9308765690068 1197.407454274892 1081.4996273631525 1127.1420140019407 762.1542083638084 1340.8725326224185 0.7998562281918289 0.7817538450089874 0.9506025954513406 1.0483993229029764 0.8314373161083086 0.8419375064392545 0.893006177054769 0.8065640849902443 0.8406034030673496 0.5684016860821374 1.0 10.388956381491264 -10.771466025681098 1.0160967745494793 1.0001504464728648 0.8676679994895671 0.0 0.1474600036282795 0.5613034323768772 1.027426209086333 0.05319743983657408 0.013420287779124065 1.69252064304926e-11 10.771466025681098 -0.1324824469832977 GAVAAEGAS(ph)DTER ddPTM_A549_MK2206_60min_R1 2 GAVAAEGASDTER 13 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.99)DT(0.01)ER;GAVAAEGAS(1)DTER 163.99 7.070399999999999e-19 4303700.0 1104.81 1229.28 1067.0 1090.08 1837.73 1585.5900000000001 1076.17 1159.96 1842.4099999999999 1228.16 2056.08 True False 1291.2749179888374 1291.8451013205947 1218.3166443587559 1357.1496489355507 1567.4023514262103 1753.3760813705408 1271.6961588298875 1324.3878822285144 1425.1070767242 950.7178030058354 1545.498591078809 0.8355070172451499 0.8358759488864006 0.7883000679465716 0.8781306283742487 1.0141726174801051 1.134505130895413 0.8228387694240482 0.8569324423026797 0.9221018284652256 0.6151528111987491 1.0 10.59385662365632 -6.552361001947223 5.586528440813509 0.9594137668477251 0.8228395341747143 0.0 0.13001548996789725 0.14845612813218284 13.041161730169737 0.011837286397502452 0.0254287688555651 2.8031026246880515e-07 6.552361001947223 -0.13657423267301072 GAVAAEGAS(ph)DTER ddPTM_A549_PD325901_60min_R1 1 GAVAAEGASDTER 13 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.997)DT(0.003)ER 121.04 9.6051e-06 2496000.0 538.5 630.76 1038.9 791.95 941.06 831.1 758.16 517.26 683.37 886.42 967.01 True False 593.1681235772522 683.9163588524121 1109.4060014132067 840.8669528510524 874.9631920807554 824.3317971503272 787.0121936810705 506.94284351738 654.6503353831889 830.4512899226158 848.0739003814494 0.6994297587868877 0.8064348620383177 1.3081477933871264 0.9915019816938647 1.031706307300828 0.9720046764551492 0.9279995450008373 0.5977578643669681 0.7719260492378531 0.9792204306123473 1.0 9.72804617516285 -8.005023597274505 24.165479671924153 0.8622309573765979 0.9777280028841623 0.10393602067668906 0.17317160861786984 307.2464634527594 1477989.6463820627 0.02919437504356492 0.03971903076466394 9.884993833481763e-09 8.005023597274505 0.11549704550756434 GAVAAEGAS(ph)DTEREEPTESQGLAAR ddPTM_A549_MK2206_60min_R1 3 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.996)DT(0.004)EREEPTESQGLAAR;GAVAAEGAS(0.997)DT(0.003)EREEPTESQGLAAR;GAVAAEGAS(0.997)DT(0.003)EREEPTESQGLAAR 277.72 2.2142999999999995e-153 357858000.0 5621.6 6214.6 6219.9 5582.58 7695.799999999999 5344.93 6400.7 5853.68 8992.2 10126.5 10258.599999999999 True False 6570.388645075671 6530.8965952972285 7101.9753479353585 6950.312350611535 6563.758014564617 5910.526944922613 7563.624337997212 6683.457066143153 6955.481057592697 7838.916616840312 7711.106497043436 0.8520682015732586 0.8469467511311484 0.9210059996783044 0.9013378758646892 0.8512083210212786 0.7664953074100074 0.9808740601491146 0.8667312620705859 0.9020081696783129 1.0165748093150937 1.0 12.912722177650574 -10.307089983452252 0.4092181720218951 1.0239537659494578 0.8656660893919064 0.5146581658326983 0.050148390058763155 1.1214662226414924 0.2997197759152125 0.07407656782115613 0.016031798407521 4.930716316128488e-11 10.307089983452252 -0.15828767655755138 GAVAAEGAS(ph)DTEREEPTESQGLAAR ddPTM_A549_PD325901_60min_R1 2 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.707)DT(0.289)EREEPT(0.003)ES(0.001)QGLAAR;GAVAAEGAS(0.997)DT(0.003)EREEPTESQGLAAR 275.91 2.5877999999999993e-153 826690000.0 4635.5 3396.12 3860.1 4048.4 4711.6 4594.1 4863.5 3915.0 4566.700000000001 4270.1 4655.3 True False 5106.092547525262 3682.322951084177 4122.069598666974 4298.460473416507 4380.673470137598 4556.687172768999 5048.583153909317 3836.912253741914 4374.777480127033 4000.485157260178 4082.727612378114 1.2506571665580835 0.9019271674945984 1.0096362015848381 1.0528403757292866 1.0729771579314193 1.1160889496898894 1.2365711439095026 0.9397913889991262 1.071533027788451 0.9798560024262722 1.0 11.995317603050529 -10.662510177943762 0.6486013490987249 0.9934118650664349 1.0690737613340007 0.08871503587546836 0.10092453611918314 2.496371892199568 1.5991372204117875 0.10641070193368841 0.020030073670058667 2.175153057445257e-11 10.662510177943762 0.07566189626756581 GAVAAEGASDT(ph)ER ddPTM_A549_PD325901_60min_R1 1 GAVAAEGASDTER 13 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.417)DT(0.583)ER 132.59 3.5762e-08 2675200.0 798.67 721.33 728.88 914.74 722.47 678.85 621.79 852.78 786.0 783.05 834.79 True False 879.7503904502214 782.1190106078552 778.346179911501 971.2414122747293 671.7261995861935 673.3216706720003 645.4525587065439 835.7706339070314 752.9671533886278 733.6080893638506 732.116122169812 1.2016541690720561 1.0682991221253904 1.063145799336688 1.3266220792901116 0.917513191207103 0.9196924508047174 0.8816259322272283 1.1415820640993575 1.0284804972700485 1.0020378832658632 1.0 9.515928684720933 -6.786491380202035 24.999993339036944 1.0007075119715765 1.1507579413427593 0.4546973769063043 0.09355528262277626 179.53914811469392 179166.03639339437 0.013331900102399923 0.025202003877105028 1.6349656013079747e-07 6.786491380202035 0.15005042937118285 GAVRS(ph)PPVDCPR ddPTM_A549_PD325901_60min_R1 1 GAVRSPPVDCPR 12 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 GAVRS(1)PPVDCPR 52.662 0.0067928 9548600.0 3096.6 2723.5 2851.7 2608.9 2696.3 2864.9 2645.9 2914.9 2690.0 2829.0 3969.7 True False 3410.964552403566 2953.0189031240825 3045.2335106651662 2770.0458277582065 2506.92118973003 2841.569204254569 2746.591172392036 2856.7600328051885 2576.948654726984 2650.376457199838 3481.4520660016315 0.9797534154537365 0.8482147239544096 0.8747021222562882 0.7956581837817865 0.7200791917290914 0.8162023059297917 0.7889211513822257 0.8205656658907019 0.7401936335393958 0.7612847762812186 1.0 11.765473444610862 -10.92836575070082 1.1707914487010191 1.00054938728244 0.8114908481847699 0.0 0.0957154960509583 0.32242168754907846 0.7815055544424031 0.049302469548655484 0.011472283808673071 1.1793270209858102e-11 10.92836575070082 -0.18905853909767012 GCDS(ph)PDPDTSYVLTPHTEEK ddPTM_A549_MK2206_60min_R1 2 GCDSPDPDTSYVLTPHTEEK 20 0 Q02078-3;Q02078-5;Q02078 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 GCDS(1)PDPDTSYVLTPHTEEK;GCDS(0.704)PDPDT(0.288)S(0.008)YVLTPHTEEK 176.57 3.1302e-35 16386400.0 3627.1000000000004 3806.3 3248.8 3416.0 4579.1 3793.0 3816.0 3591.2 6140.2 5007.1 5030.299999999999 True False 4239.26580591895 4000.02441197822 3709.5286918394804 4252.920153350067 3905.52045589709 4194.372742410374 4509.317804895925 4100.263597588747 4749.45450388455 3875.9926324180233 3781.1376807827223 1.12116145028641 1.0578891195388016 0.9810615230153644 1.124772624642878 1.0328955953512435 1.1092885518895226 1.1925822822623229 1.0843994436986393 1.2560913949320616 1.02508635221547 1.0 11.884604667117644 -7.444551026808878 6.640549690229504 1.1266127098573917 1.0625264862033201 0.07325479764222353 0.0763352438592987 0.5094807354066274 36.21033264640704 0.014655236176817387 0.023437709948356495 3.5929317963715794e-08 7.444551026808878 -0.06408622365407157 GCDS(ph)PDPDTSYVLTPHTEEK ddPTM_A549_PD325901_60min_R1 2 GCDSPDPDTSYVLTPHTEEK 20 0 Q02078-3;Q02078-5;Q02078 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 GCDS(0.841)PDPDT(0.155)S(0.004)YVLTPHTEEK;GCDS(0.891)PDPDT(0.108)S(0.001)YVLTPHTEEK 141.79 2.5493e-21 27617000.0 7285.9 7183.700000000001 6787.3 7282.700000000001 7137.7 7215.2 6605.2 7146.5 6775.1 7990.2 10588.8 True False 8025.559204403904 7789.095610197339 7247.92699335052 7732.53583878826 6636.372575728233 7156.441803391936 6856.564500504129 7003.957451179209 6490.366108044898 7485.697408383941 9286.444727933622 0.8642230088618333 0.838759701736849 0.7804845886336629 0.8326691285340659 0.7146300624356302 0.7706331123541136 0.7383411737626119 0.7542130122318295 0.6989075257748404 0.8060886192394994 1.0 13.180910657901451 -10.878752554306576 1.107842451663442 1.0009899022062372 0.7711501426580177 0.15089030029570838 0.07422924117350402 0.22032330741768105 0.47674167362622677 0.03921158537662484 0.009283505066338689 1.322048676391173e-11 10.878752554306576 -0.22983975954821945 GCGFPVGEHS(ph)PHSR ddPTM_A549_MK2206_60min_R1 2 GCGFPVGEHSPHSR 14 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GCGFPVGEHS(0.966)PHS(0.034)R;GCGFPVGEHS(0.866)PHS(0.134)R 57.498999999999995 0.0036766 11236000.0 2375.62 2872.58 2389.85 2186.94 3039.2200000000003 1948.44 2182.28 2408.0299999999997 3554.0 4126.849999999999 4139.36 True False 2776.5665776673295 3018.7820522187903 2728.7666659051283 2722.7403981754683 2592.154764030388 2154.6226275302038 2578.772028110138 2749.375626782587 2749.024674571788 3194.591718778196 3111.442671475809 0.8923727257203031 0.9702194033312951 0.8770101056082864 0.8750732973923081 0.8331038163723857 0.6924834731112787 0.8288026810685164 0.8836337085646873 0.8835209145177275 1.026723631473161 1.0 11.603367949386653 -10.101283495497952 0.7459228850760773 0.9944991411869343 0.8560984198527825 0.45142251374086273 0.06458342885732633 0.523762810389398 0.5739378743556451 0.03696038230347739 0.014587103488573776 7.919841762101728e-11 10.101283495497952 -0.13840072133415182 GCNES(ph)FR ddPTM_A549_MK2206_60min_R1 2 GCNESFR 7 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9;A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 F5GZI3;Q8TEW0-2;Q8TEW0-11;A0A087WZG6 PARD3;PARD3B Partitioning defective 3 homolog;Partitioning defective 3 homolog B 1 GCNES(1)FR;GCNES(1)FR 62.104 0.027531 91750000.0 13655.7 15412.5 14596.9 13071.900000000001 17279.2 16095.599999999999 12918.8 14658.2 20444.9 19866.7 19806.2 True False 15960.448310189237 16196.930417889896 16666.959911940314 16274.516086819887 14737.452569617835 17798.825708605422 15265.978736344205 16736.044738854802 15814.162793796497 15378.798671977615 14887.773916688617 1.0720506906877592 1.0879350068403286 1.1195065162332496 1.0931463748637926 0.9899030339987714 1.195533046660094 1.0254037186332898 1.1241468894214162 1.0622248082414412 1.032981744486231 1.0 13.86184043169344 -9.934035943058264 0.6639164715399531 1.0018316614465568 1.088828069146502 0.20727866763274028 0.05138570765848055 0.6061130322187384 0.5425020357798767 0.024956825909714608 0.010451375522143244 1.1640296880568246e-10 9.934035943058264 0.08699640769994521 GCNES(ph)FR ddPTM_A549_PD325901_60min_R1 2 GCNESFR 7 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9;A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 F5GZI3;Q8TEW0-2;Q8TEW0-11;A0A087WZG6 PARD3;PARD3B Partitioning defective 3 homolog;Partitioning defective 3 homolog B 1 GCNES(1)FR;GCNES(1)FR 73.57300000000001 0.018977 102534000.0 11779.3 13724.3 15262.6 13059.3 12359.900000000001 12576.7 14028.0 15617.7 11046.400000000001 15254.599999999999 16694.5 True False 12975.125864537653 14880.894926435032 16298.411817469634 13865.943301177796 11491.7832633402 12474.279524991589 14561.843216416135 15306.192721651376 10582.158222890757 14291.421952633676 14641.182335154865 0.8862075184586116 1.0163724886278205 1.1131895938715006 0.9470507902824455 0.784894484631022 0.851999465578655 0.9945810989220297 1.0454205385380495 0.7227666441583747 0.976111192763348 1.0 13.83774444138108 -6.523178144493333 24.999378100157838 0.8826746769872453 1.0103268126407206 0.0962202620748277 0.10600184018425785 13.918356329797378 1162167.3207264564 0.01792607855861313 0.0376041292308701 2.9979325362344474e-07 6.523178144493333 0.12765213565347522 GCNES(ph)FRAAIDK ddPTM_A549_MK2206_60min_R1 1 GCNESFRAAIDK 12 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9;A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 F5GZI3;Q8TEW0-2;Q8TEW0-11;A0A087WZG6 PARD3;PARD3B Partitioning defective 3 homolog;Partitioning defective 3 homolog B 1 GCNES(1)FRAAIDK 42.946999999999996 0.021598 4454600.0 1568.1 1849.5 1844.2 1444.9 1742.9 1171.4 860.47 1006.3 1903.0 2499.6 2429.2 True False 1832.7569436358253 1943.6316501467866 2105.7352910275704 1798.9005648640268 1486.5217188056693 1295.3567704876107 1016.8062608959112 1148.9461066645003 1471.9735384665487 1934.9386239524058 1825.9625974906828 1.0037209667681473 1.064442203152359 1.1532192904287104 0.9851793061567384 0.8141030494537577 0.7094103528011725 0.5568603991632964 0.6292276239630713 0.8061356462007484 1.0596814122104596 1.0 10.834441498523455 -6.601429566615575 4.062848613773964 0.8374831567992749 1.073027562244233 0.41157133158844383 0.14387858979734827 0.2170409928349735 6.928959859366798 0.02386507697836651 0.05195008289949734 2.5036316515893956e-07 6.601429566615575 0.23554440544495803 GCNES(ph)FRAAIDK ddPTM_A549_PD325901_60min_R1 2 GCNESFRAAIDK 12 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9;A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 F5GZI3;Q8TEW0-2;Q8TEW0-11;A0A087WZG6 PARD3;PARD3B Partitioning defective 3 homolog;Partitioning defective 3 homolog B 1 GCNES(1)FRAAIDK;GCNES(1)FRAAIDK 48.898999999999994 0.0090166 21173300.0 3788.7 4514.200000000001 5764.0 5438.6 4403.7 6083.6 4974.8 6367.5 4482.6 5278.9 6660.0 True False 4173.326034906473 4894.627476586277 6155.179701747739 5774.529970043229 4094.399303940261 6034.057178611149 5164.118736315016 6240.495217292881 4294.211910661403 4945.589353097288 5840.86222121845 0.7145051324350336 0.8379974207926478 1.0538135413274172 0.988643414505781 0.700992276288643 1.0330764448938494 0.8841363724614171 1.0684202059453927 0.7352017130384555 0.846722481336942 1.0 12.5119656384349 -5.381342350147845 4.040274089608967 0.9026220692304184 0.7164614441863005 0.19586964149346342 0.11957044978557718 0.32477016228415456 8.185525763651045 0.017796911464946448 0.12990394285816229 4.155828813643753e-06 5.381342350147845 -0.1861606250441179 GCPS(ph)PSPSEVR ddPTM_A549_MK2206_60min_R1 1 GCPSPSPSEVR 11 0 B4E099;Q8NFT6-4;Q8NFT6-2;Q8NFT6 B4E099 DBF4B Protein DBF4 homolog B 1 GCPS(0.673)PS(0.322)PS(0.005)EVR 81.865 0.00074749 1494400.0 624.65 830.77 653.44 648.46 705.27 560.61 621.04 424.44 804.97 1052.4 906.42 True False 730.075648773751 873.0526444944288 746.1076177036412 807.3327291104752 601.52571726552 619.9333780971999 733.8749291280312 484.6056697929852 622.645580272947 814.6621090764565 681.3308980806459 1.0715434318778472 1.2813930014826507 1.0950738030602687 1.1849348552733845 0.8828686897365989 0.9098859010263489 1.0771196949902102 0.7112633100276994 0.9138666425183134 1.1956923007182172 1.0 9.412211823660808 -6.75593378465659 24.999890292230315 0.9402169446552954 1.1625216161366936 0.3729622330736554 0.12517840584068068 79.9264685522479 362927.2662215773 0.013818292246734672 0.028130517558887312 1.7541479301842194e-07 6.75593378465659 0.2223046714813982 GCPS(ph)PSPSEVR ddPTM_A549_PD325901_60min_R1 2 GCPSPSPSEVR 11 0 B4E099;Q8NFT6-4;Q8NFT6-2;Q8NFT6 B4E099 DBF4B Protein DBF4 homolog B 1 GCPS(0.941)PS(0.055)PS(0.004)EVR;GCPS(0.855)PS(0.088)PS(0.057)EVR 93.821 0.00028938 3705500.0 1542.18 1388.6 1169.4 1184.8600000000001 1595.65 997.9300000000001 1265.5300000000002 1194.77 1117.58 1369.4099999999999 1532.22 True False 1698.7409783070884 1505.622195292124 1248.762516173456 1258.046111187699 1483.5770486936617 989.8031889426364 1313.690436674588 1170.9393750710674 1070.6119990891382 1282.945218895027 1343.766653542842 1.264163665490847 1.120449142953912 0.9293001228160355 0.9362087590660619 1.1040436557807187 0.736588593215213 0.9776179764626857 0.871385944861695 0.7967246368753598 0.9547380979521561 1.0 10.392066919055193 -4.498435408527876 0.7127902511989572 0.9015611431555021 2.125042817132208 0.5611306039326049 0.09481229274349844 4.0422702774873125 0.6619720394127209 0.01639872820151175 5.147148826047419 3.1736906433706714e-05 4.498435408527876 1.223481673976706 GCPSPSPS(ph)EVR ddPTM_A549_MK2206_60min_R1 1 GCPSPSPSEVR 11 0 B4E099;Q8NFT6-4;Q8NFT6-2;Q8NFT6 B4E099 DBF4B Protein DBF4 homolog B 1 GCPS(0.381)PS(0.227)PS(0.392)EVR 70.1 0.0032176 1400700.0 679.43 478.53 585.15 649.06 838.8 634.81 572.83 520.4 1010.7 1122.0 1038.7 True False 794.1011735313363 502.8851330331126 668.133068834607 808.0797291374101 715.413631151641 701.985172847226 676.9057961683792 594.1682936581597 781.7780637562487 868.5394207371578 780.7621233383716 1.0170846533076294 0.6440951962204359 0.8557447253944814 1.034988385043878 0.9163016618847819 0.8991024946826157 0.8669808331301665 0.7610106534338824 1.0013012163212185 1.1124251481660885 1.0 9.608739255742451 -8.810412075149669 24.290929706211195 1.0006146347867058 0.8734379647402294 0.2983561347454776 0.10758678210193239 85.27038070035904 42294.46200648685 0.017282939058843864 0.018399110784555583 1.5473477396739596e-09 8.810412075149669 -0.12717667004647637 GCRLS(ph)PR ddPTM_A549_MK2206_60min_R1 4 GCRLSPR 7 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR 96.492 0.0067149 927368000.0 10380.4 12160.899999999998 9968.52 8731.45 12007.73 9640.85 9250.28 8652.06 13592.099999999999 12966.699999999999 13212.0 True False 12132.35774358608 12779.8378665964 11382.20603151185 10870.65564196968 10241.408823543748 10661.038347921702 10930.936138436247 9878.516000822481 10513.511052123577 10037.513464235743 9931.095767350122 1.221653483946144 1.2868507328880987 1.14611784018159 1.094607875770214 1.031246607973898 1.0735007090528086 1.1006777494154514 0.9947055422926739 1.0586456216330353 1.0107156047407664 1.0 13.27773719384627 -6.136856882985142 1.4959045911360793 1.0346075671124322 1.2615955466734148 0.8339926523584507 0.03633193724807793 0.12334428034504859 0.5010552430076828 0.005538216262663496 0.025070942821417603 7.29697934642052e-07 6.136856882985142 0.2269879795609826 GCRLS(ph)PR ddPTM_A549_PD325901_60min_R1 4 GCRLSPR 7 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR 93.429 0.0067149 1294490000.0 11468.300000000001 12967.0 13877.8 11308.9 10221.3 10040.1 12399.2 12214.7 7261.7 10582.599999999999 12239.3 True False 12632.553373483759 14059.774597690455 14819.630961990764 12007.425068624627 9503.39114957072 9958.33675438454 12871.058341102591 11971.068226253221 6956.516002241983 9914.412829962179 10733.943691315155 1.1768790424813549 1.309842402943313 1.3806324486294206 1.1186405867155653 0.8853587668118591 0.9277425931013445 1.1990987386599183 1.1152534958739373 0.6480857550865026 0.9236505347036561 1.0 13.389892604627596 -6.830809720796097 0.6319296925805858 0.8592536913673146 1.33040255717399 0.3816733090028217 0.15807423157495135 0.7046338728728477 0.4751536838657273 0.03759540725121607 0.16739643151200398 1.47635323222842e-07 6.830809720796097 0.47114886580667537 GCS(ph)LAFMFIITWLLIK ddPTM_A549_PD325901_60min_R1 1 GCSLAFMFIITWLLIK 16 0 A0A0A0MTN7;Q99665-2;Q99665-3;Q99665 A0A0A0MTN7 IL12RB2 Interleukin-12 receptor subunit beta-2 1 GCS(0.5)LAFMFIIT(0.5)WLLIK 40.515 0.024950999999999997 3818500.0 1943.5 1576.3 2149.3 1866.4 2231.1 2535.1 2225.1 2526.7 2236.5 2336.7 2203.8 True False 2140.8026892709195 1709.1403330253318 2295.1644227908414 1981.6832890980552 2074.3952328771525 2514.4549861097253 2309.777398121441 2476.3029863421966 2142.507682638253 2189.1603632162837 1932.7465710392225 1.10764790446366 0.8843064883081596 1.187514419728992 1.0253197800436504 1.073288792209196 1.3009750082017855 1.1950751499093293 1.281235224238793 1.1085300653185188 1.1326680880045177 1.0 10.916436763041727 -4.8904934677651815 19.791443687779505 1.0886674191194428 3.898382362779101 0.0 0.12039915321833294 6969.008526962026 1258217.5628989737 0.017016381771876612 925.3218215123235 1.2867866074756012e-05 4.8904934677651815 2.8097149436596585 GCTSSS(ph)SLSPPRGDR ddPTM_A549_MK2206_60min_R1 1 GCTSSSSLSPPRGDR 15 1 X6RLP6;Q96LT9-2;Q96LT9 X6RLP6 RNPC3 RNA-binding protein 40 1 GCT(0.005)S(0.021)S(0.115)S(0.707)S(0.023)LS(0.131)PPRGDR 56.215 0.0035494999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GDAAS(ph)SPAPAASVGSSQGGAR ddPTM_A549_PD325901_60min_R1 1 GDAASSPAPAASVGSSQGGAR 21 0 F8WCC1;E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2 F8WCC1 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GDAAS(0.5)S(0.5)PAPAASVGSSQGGAR 166.52 1.6947e-28 30482000.0 638.0 610.63 942.85 653.28 1077.8 554.78 605.87 966.83 972.42 876.98 874.77 True False 702.7692903292236 662.0899331061712 1006.837470817636 693.631621893473 1002.0990462081469 550.2620556167226 628.9267143947856 947.5458171865375 931.5525690816404 821.6073331336564 767.1788356239136 0.9160436363676424 0.8630190281092959 1.312389529096978 0.9041328953364207 1.30621310139921 0.7172539570505984 0.8197915338518253 1.235104219755931 1.2142573880105134 1.0709462969810402 1.0 9.583419110650071 -8.27408617194537 24.783281404313232 1.1140486353673387 0.9853668994064493 0.1341989358375545 0.18466694752224658 1296.233770648325 2540159.60950215 0.030917105121356245 0.03750696307227568 5.320026897579845e-09 8.27408617194537 -0.1286817359608894 GDAASS(ph)PAPAAS(ph)VGSSQGGAR ddPTM_A549_MK2206_60min_R1 3 GDAASSPAPAASVGSSQGGAR 21 0 F8WCC1;E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2 F8WCC1 CHTF18 Chromosome transmission fidelity protein 18 homolog 2 GDAAS(0.08)S(0.92)PAPAAS(0.667)VGS(0.296)S(0.036)QGGAR;GDAAS(0.12)S(0.878)PAPAAS(0.553)VGS(0.388)S(0.061)QGGAR;GDAAS(0.472)S(0.528)PAPAAS(0.424)VGS(0.304)S(0.273)QGGAR 96.544 1.1617e-06 5358100.0 851.28 756.97 306.72 723.93 903.9200000000001 792.72 541.92 522.99 981.3700000000001 1092.98 1280.6599999999999 True False 994.9552522022234 795.4965397197149 350.2175081140746 901.2928824984522 770.9545654155834 876.6051042350512 640.3798492738995 597.1254340897023 759.0912619258626 846.0750588924233 962.6367775820929 1.0335728650439748 0.8263724784313837 0.3638106462062824 0.936275138752 0.8008779462509544 0.9106291434624676 0.6652351792359069 0.6203019124093042 0.7885541874189695 0.8789141227468537 1.0 9.910847732360422 -10.318680401643752 0.8698584876121244 0.9907937546121428 0.7659013607579005 0.10825053449334632 0.1739106247565138 0.6884848245833033 0.9988830327645645 0.08811327291159261 0.03225757660053588 4.8008661557036356e-11 10.318680401643752 -0.2248923938542423 GDAASS(ph)PAPAAS(ph)VGSSQGGAR ddPTM_A549_PD325901_60min_R1 3 GDAASSPAPAASVGSSQGGAR 21 0 F8WCC1;E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2 F8WCC1 CHTF18 Chromosome transmission fidelity protein 18 homolog 2 GDAAS(0.474)S(0.531)PAPAAS(0.912)VGS(0.043)S(0.04)QGGAR;GDAAS(0.118)S(0.882)PAPAAS(0.726)VGS(0.233)S(0.041)QGGAR;GDAAS(0.084)S(0.916)PAPAAS(0.668)VGS(0.285)S(0.047)QGGAR 124.18 4.3145e-15 7730880.0 864.59 1002.63 744.5 1006.92 998.5699999999999 1017.03 552.48 1032.01 747.01 1144.42 724.12 True False 952.3625403224826 1087.1251488302914 795.0262470421914 1069.1151615187598 928.4338880794843 1008.7476448752213 573.5049287286566 1011.4257509538173 715.6157674972507 1072.1611258920616 635.0578305748805 1.499646952562359 1.711852206981183 1.251895825491201 1.683492604997804 1.461967467181733 1.58843430678126 0.9030751234253679 1.5926514126095146 1.1268513402148679 1.6882889624736965 1.0 9.310744164470044 -8.3361656378658 0.4633313578108216 1.0012463121266812 1.5757024153471058 0.0 0.291781528037737 0.5054739923069933 0.25419786484734624 0.07203425091365386 0.09659091251522306 4.6114166376247795e-09 8.3361656378658 0.5744561032204245 GDAASS(ph)PAPAASVGSSQGGAR ddPTM_A549_MK2206_60min_R1 2 GDAASSPAPAASVGSSQGGAR 21 0 F8WCC1;E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2 F8WCC1 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GDAAS(0.241)S(0.759)PAPAASVGSSQGGAR;GDAAS(0.01)S(0.99)PAPAASVGSSQGGAR 228.49 6.834399999999999e-76 48722000.0 1343.67 1537.58 1235.81 1273.26 1719.9099999999999 1087.8700000000001 1211.95 1308.92 1279.1100000000001 2109.62 1964.31 True False 1570.4486464225179 1615.8362544648267 1411.066440735702 1585.2087571588131 1466.913517351 1202.9876813303372 1432.1456272650994 1494.4634183993821 989.3936273189418 1633.0553768052778 1476.5176148019611 1.0636166007631107 1.0943562327101337 0.9556719314350761 1.0736131701154343 0.9934954399766851 0.8147465829533559 0.9699482166064012 1.0121541412154627 0.6700858949465665 1.1060182150446694 1.0 10.527982852536493 -7.124007772182631 0.966521356281268 0.8570226319300719 1.0593601742839656 0.0 0.12470948250745488 0.550620636773222 1.0057769728969799 0.02280518784514103 0.058161489161556036 7.51609443011173e-08 7.124007772182631 0.20233754235389367 GDAASS(ph)PAPAASVGSSQGGAR ddPTM_A549_PD325901_60min_R1 1 GDAASSPAPAASVGSSQGGAR 21 0 F8WCC1;E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2 F8WCC1 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GDAAS(0.065)S(0.935)PAPAASVGSSQGGAR 222.7 1.3239e-75 47261000.0 1026.9 809.96 802.64 838.13 1033.5 1055.9 901.2 767.16 828.47 1173.8 962.74 True False 1131.1501320361751 878.2181717548667 857.1119770664128 889.8993865686629 960.9105253814431 1047.3011004825287 935.4956591555627 751.858391974622 793.6522869820316 1099.6860676780382 844.3290833116888 1.3397029125178255 1.040137298492971 1.0151397056045801 1.0539722060481855 1.1380758336696044 1.2403944400147018 1.1079751694520503 0.890480272248385 0.9399798048755006 1.302437745440166 1.0 9.721661599048295 -8.162814252356336 6.651713094589051 0.9649345045546036 1.1277508418783768 0.033031233550477324 0.13650758364737398 0.18556961031410402 10.772227324876539 0.014678898787746324 0.018991277831942634 6.873623618686138e-09 8.162814252356336 0.1628163373237732 GDAEKPEEELEEDDDEELDET(ph)LSER ddPTM_A549_MK2206_60min_R1 2 GDAEKPEEELEEDDDEELDETLSER 25 1 Q9NS69 Q9NS69 TOMM22 Mitochondrial import receptor subunit TOM22 homolog 1 GDAEKPEEELEEDDDEELDET(0.975)LS(0.025)ER;GDAEKPEEELEEDDDEELDET(0.964)LS(0.036)ER 127.23 7.3967e-24 10444100.0 780.13 1133.28 937.33 839.61 1178.44 720.6700000000001 683.3599999999999 888.78 1389.8000000000002 1448.5500000000002 1407.23 True False 911.7968716527114 1190.9591113697484 1070.2574885255785 1045.3144876915253 1005.0930370700281 796.9308210579705 807.5176664448849 1014.7672867745948 1075.0125190545502 1121.321548938333 1057.7759534278007 0.8619943275302928 1.1259086647889451 1.0117997909267369 0.9882191822418603 0.9501946360313357 0.7534022856876805 0.7634108752690629 0.9593404761057074 1.0162951006504668 1.0600747212154031 1.0 10.046818368533833 -2.0101317866671002 6.586557454859031 0.9718882123309438 0.7441159864287341 0.0 0.11282515121284337 0.0 0.0 0.01521736340311393 0.0 0.009769407232947206 2.0101317866671002 -0.2277722259022097 GDAEKPEEELEEDDDEELDET(ph)LSER ddPTM_A549_PD325901_60min_R1 3 GDAEKPEEELEEDDDEELDETLSER 25 1 Q9NS69 Q9NS69 TOMM22 Mitochondrial import receptor subunit TOM22 homolog 1 GDAEKPEEELEEDDDEELDET(0.893)LS(0.107)ER;GDAEKPEEELEEDDDEELDET(0.97)LS(0.03)ER;GDAEKPEEELEEDDDEELDET(0.553)LS(0.447)ER 146.88 1.4205e-32 26078700.0 2544.53 1552.26 2052.87 1443.98 2369.09 1880.03 1733.18 2060.07 2191.8 1999.3999999999999 1298.31 True False 2802.84881241602 1683.0743978569435 2192.190103110144 1533.1713650834809 2202.693291316809 1864.7196590019594 1799.1371133324872 2018.9802877563498 2099.6862681898147 1873.1575427802607 1138.6261006651835 2.4616059747608108 1.478162495022461 1.925294090684791 1.3465099422785098 1.9345185307362962 1.6376927051932089 1.5800947407418768 1.773172322834392 1.8440524654785109 1.6451032886791943 1.0 10.153078360704061 -10.782011415683682 0.7471279042550416 0.930215303993219 1.7627678429411298 0.10614615991836684 0.33690842961415346 0.5105363301780493 0.43570351906068283 0.26612710650220517 0.048645763556893394 1.651918376020627e-11 10.782011415683682 0.8325525389479108 GDAEKPEEELEEDDDEELDETLS(ph)ER ddPTM_A549_PD325901_60min_R1 1 GDAEKPEEELEEDDDEELDETLSER 25 1 Q9NS69 Q9NS69 TOMM22 Mitochondrial import receptor subunit TOM22 homolog 1 GDAEKPEEELEEDDDEELDET(0.224)LS(0.776)ER 97.04700000000001 2.1976e-09 2342900.0 719.38 540.49 557.52 388.7 946.74 473.63 565.94 776.78 816.87 509.57 691.56 True False 792.4109280204345 586.0389891498199 595.3566598401104 412.7091161982504 880.2442484756913 469.772914311526 587.4771563942506 761.2865135278781 782.539794641945 477.39566323623995 606.5025041600342 1.3065254019319694 0.9662598012871276 0.9816227563060765 0.680473886533783 1.4513447882540425 0.7745605518350339 0.968631048288692 1.2552075355108543 1.2902498988453657 0.7871289235605076 1.0 9.244369791809389 -8.243571723597112 24.24576785884145 1.149753023662595 1.0093275533593074 0.0 0.24045920466525142 1119.3427108313153 1518908.2839151518 0.03457724068528095 0.04458411989196628 5.707268130346236e-09 8.243571723597112 -0.14042547030328767 GDALNLS(ph)SPKR ddPTM_A549_MK2206_60min_R1 1 GDALNLSSPKR 11 1 K7EIX9;K7EMC4;Q9BUG6-2;Q9BUG6;A0A0C4DGQ1;A6NJL1 K7EIX9;A6NJL1 ZSCAN5A;ZSCAN5B Zinc finger and SCAN domain-containing protein 5A;Zinc finger and SCAN domain-containing protein 5B 1 GDALNLS(0.573)S(0.427)PKR 51.211000000000006 0.045427999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GDALNLS(ph)SPKR ddPTM_A549_PD325901_60min_R1 2 GDALNLSSPKR 11 1 K7EIX9;K7EMC4;Q9BUG6-2;Q9BUG6;A0A0C4DGQ1;A6NJL1 K7EIX9;A6NJL1 ZSCAN5A;ZSCAN5B Zinc finger and SCAN domain-containing protein 5A;Zinc finger and SCAN domain-containing protein 5B 1 GDALNLS(0.5)S(0.5)PKR;GDALNLS(0.5)S(0.5)PKR 71.548 0.0010262000000000001 70553000.0 3772.0 4072.3 3928.2 3382.2 4525.9 4234.3 3955.1 4432.299999999999 5326.4 4603.6 4905.9 True False 4154.930663200362 4415.487012738095 4194.791274185539 3591.1108124664815 4208.016397507374 4199.817264677688 4105.613494813762 4343.894299427912 5102.549931054948 4312.927910344709 4302.505401062403 0.965700278301661 1.0262594932821685 0.9749647898523809 0.8346557360694402 0.9780386089621882 0.9761329442237637 0.9542378479757347 1.0096197202577106 1.1859485242702992 1.0024224279369254 1.0 12.070961287986497 -8.531076816441523 24.589387736438876 1.0883340413800437 0.960138502081272 0.3168378252373725 0.06445012969629559 124.4088007264483 373151.3454685301 0.01318979934396083 0.01496866212309401 2.9439008811760498e-09 8.531076816441523 -0.1281955392987717 GDALNLSS(ph)PKR ddPTM_A549_MK2206_60min_R1 2 GDALNLSSPKR 11 1 K7EIX9;K7EMC4;Q9BUG6-2;Q9BUG6;A0A0C4DGQ1;A6NJL1 K7EIX9;A6NJL1 ZSCAN5A;ZSCAN5B Zinc finger and SCAN domain-containing protein 5A;Zinc finger and SCAN domain-containing protein 5B 1 GDALNLS(0.15)S(0.85)PKR;GDALNLS(0.202)S(0.798)PKR 85.45700000000001 0.00017891 29770000.0 4366.3 3913.0 3969.6000000000004 4247.0 5735.8 3887.9 3940.8 4039.0 5758.0 5036.2 5687.299999999999 True False 5103.224694214083 4112.154986225669 4532.548970427849 5287.5151906550755 4892.071418168312 4299.314997420848 4656.792349458565 4611.540618918729 4453.822193636569 3898.5189222071954 4274.986448505173 1.193740554662698 0.9619106483164547 1.0602487341246982 1.2368495793721057 1.1443478188986809 1.00569090667508 1.0893116049728993 1.078726371292063 1.0418330554460422 0.9119371415950064 1.0 12.061704131396208 -8.874260761615345 0.5770344491217131 1.0054930962158042 1.1041904159988298 0.29530288685817885 0.07823070707680474 0.8202138967474907 0.6157362094412947 0.025767097660731122 0.023324509448873078 1.3357932309836078e-09 8.874260761615345 0.09869731978302565 GDAPDLVDDGEDES(ph)AEHDEYIDGDEK ddPTM_A549_MK2206_60min_R1 2 GDAPDLVDDGEDESAEHDEYIDGDEK 26 0 D6REK3;Q6UX04-2;Q6UX04 D6REK3 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 GDAPDLVDDGEDES(0.962)AEHDEY(0.038)IDGDEK;GDAPDLVDDGEDES(0.962)AEHDEY(0.038)IDGDEK 64.028 0.00012324 1630140.0 532.63 551.59 625.9000000000001 414.15 825.9300000000001 1017.0799999999999 595.1 639.44 984.5 783.53 903.02 True False 622.5249224467507 579.6635749686214 714.6620315877647 515.6167685918998 704.4367911028548 1124.706730516937 703.2219669008299 730.0825782028702 761.5123219234451 606.5300288147818 678.7752119158722 0.9171297235349054 0.8539845957728717 1.0528699620167337 0.7596281648773668 1.0378057105452507 1.656964943287195 1.0360159807780187 1.0755881555282207 1.121891767046183 0.8935653780031606 1.0 9.406790070066286 -6.987963587465484 24.403781929167106 1.1061226707415026 0.9034452872928689 0.23782404613262098 0.19344027127920943 214.90823174726842 435721.45340540935 0.026984594907033296 0.0509680308047408 1.0281024936683825e-07 6.987963587465484 -0.20267738344863373 GDAPDLVDDGEDES(ph)AEHDEYIDGDEK ddPTM_A549_PD325901_60min_R1 1 GDAPDLVDDGEDESAEHDEYIDGDEK 26 0 D6REK3;Q6UX04-2;Q6UX04 D6REK3 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 GDAPDLVDDGEDES(1)AEHDEYIDGDEK 98.81200000000001 7.182199999999999e-10 1126900.0 469.86 348.73 367.29 301.86 577.6 392.4 523.52 480.15 348.65 413.25 570.82 True False 517.5598413073498 378.1187009680413 392.2165080941924 320.50520662619954 537.0313686118254 389.2044244998051 543.4428400811362 470.573031579612 333.9974529630347 387.15732447431384 500.6127587261131 1.0338526781146393 0.7553117541994396 0.7834728565293626 0.6402258053545715 1.0727480657472357 0.7774560630260328 1.0855553131806126 0.9399940840042874 0.6671772685397452 0.7733668743471416 1.0 8.967551250110454 -6.740445936155436 24.999853063603343 0.8738357714753645 0.7983839983030997 0.0716032720756542 0.15054855889804777 731.1783059633304 870712.632497971 0.023979984916136753 0.04987641618837461 1.8178333379069416e-07 6.740445936155436 -0.07545177317226481 GDAPVDKVELSEDS(ph)PNSEQDLEK ddPTM_A549_PD325901_60min_R1 1 GDAPVDKVELSEDSPNSEQDLEK 23 1 Q5T5P2;Q5T5P2-3;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 GDAPVDKVELS(0.026)EDS(0.8)PNS(0.174)EQDLEK 67.36399999999999 0.00014414 3665100.0 1940.1 1696.4 1618.5 2029.5 2014.2 2253.4 2079.3 2329.2 1762.8 1946.3 2704.7 True False 2137.057523773866 1839.3615815163187 1728.3411428311426 2154.8576056710813 1872.7295406127744 2235.0490575123895 2158.428899336619 2282.742278777949 1688.715646302128 1823.4102858423632 2372.0390465059363 0.9009369078143113 0.7754347822502067 0.728630983278722 0.9084410346639243 0.7895019870652402 0.9422480042243251 0.9099466142920499 0.9623544275717033 0.7119257369686397 0.7687100634065385 1.0 11.2119120431703 -6.279871501794142 24.731563233743483 0.8742176873404065 0.7990442671347382 0.11143864510587231 0.09105943786796478 1401.5637344467154 1880566.0790176014 0.015867088968661923 0.03693429676358934 5.249627622335518e-07 6.279871501794142 -0.0751734202056683 GDAVANHVPAGWPDQSLAES(ph)DSEDPSGKPR ddPTM_A549_MK2206_60min_R1 2 GDAVANHVPAGWPDQSLAESDSEDPSGKPR 30 1 Q9NYQ6;A0A6I8PL36;A0A6I8PRU0 Q9NYQ6 CELSR1 Cadherin EGF LAG seven-pass G-type receptor 1 1 GDAVANHVPAGWPDQS(0.004)LAES(0.788)DS(0.153)EDPS(0.055)GKPR;GDAVANHVPAGWPDQS(0.005)LAES(0.654)DS(0.259)EDPS(0.083)GKPR 123.62 2.033e-21 50981000.0 5170.4 5367.1 3772.8999999999996 3908.0 6849.6 5370.9 4565.1 5519.8 6838.9 7098.6 7067.200000000001 True False 6043.037115856563 5640.262465262405 4307.953952672117 4865.460175436784 5842.032913610253 5939.245073085124 5394.519578388467 6302.248553678536 5289.900069479181 5495.021329808187 5312.219195202604 1.1375729979881009 1.0617525855025058 0.8109518441111343 0.9158997391957616 1.0997349128375795 1.1180346395436354 1.0154926557360788 1.1863683184176614 0.9957985307263716 1.0344116324813308 1.0 12.375098961713537 -5.521499006862165 24.989180141296266 1.0092266915354673 1.1186179593163774 0.10661606579656302 0.09569420196648534 64.6346134969262 1170578.9484843235 0.013212635990974567 0.052671340674512 3.0095460510482123e-06 5.521499006862165 0.10939126778091013 GDAVANHVPAGWPDQSLAES(ph)DSEDPSGKPR ddPTM_A549_PD325901_60min_R1 2 GDAVANHVPAGWPDQSLAESDSEDPSGKPR 30 1 Q9NYQ6;A0A6I8PL36;A0A6I8PRU0 Q9NYQ6 CELSR1 Cadherin EGF LAG seven-pass G-type receptor 1 1 GDAVANHVPAGWPDQS(0.001)LAES(0.806)DS(0.178)EDPS(0.014)GKPR;GDAVANHVPAGWPDQS(0.002)LAES(0.805)DS(0.191)EDPS(0.003)GKPR 180.61 3.4322e-59 82796000.0 6411.700000000001 7187.1 7338.5 6757.6 7988.7 7909.5 7546.0 6772.0 8985.400000000001 7833.3 9026.1 True False 7062.611063955935 7792.782140129648 7836.534739985389 7175.001604376882 7427.601271518851 7845.087654386366 7833.1671593296405 6636.927147468774 8607.774885570203 7338.7041011606625 7915.946921162137 0.8922004068868965 0.9844409288921296 0.9899680755862004 0.9063983975430097 0.9383086250442426 0.9910485419518997 0.9895426583001464 0.8384249178990717 1.0873967411982721 0.9270784877980549 1.0 12.950546223369784 -8.78844506289465 24.999990704172177 1.0412706815279267 0.9463567641789228 0.10271847647822518 0.06054986974652533 156.8819601292715 145229.70823417875 0.00918837737415401 0.009783014368363926 1.6276271931632003e-09 8.78844506289465 -0.0949139173490039 GDAYYDTDYRHS(ph)YEYQR ddPTM_A549_MK2206_60min_R1 1 GDAYYDTDYRHSYEYQR 17 1 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 GDAY(0.001)Y(0.004)DT(0.098)DY(0.001)RHS(0.895)YEYQR 47.498999999999995 0.010124 5377900.0 1622.3 1386.4 1033.9 1044.6 1658.5 1385.7 1284.6 1409.9 1747.3 1951.4 1771.0 True False 1896.1045785730512 1456.9618382068145 1180.522566637786 1300.527046893876 1414.5368470016642 1532.3338542467848 1517.9951918682682 1609.7576426376627 1351.5393398647404 1510.57738469384 1331.2118228865472 1.4243447556389732 1.0944628143758488 0.8868029462643949 0.9769497419831087 1.0625933624405757 1.151081914915789 1.1403107798251877 1.2092422971027463 1.0152699342273837 1.134738558299733 1.0 10.37852443631266 -5.283373877516636 4.025298599499518 1.0338654117747437 1.4512154293503947 0.5354355921254901 0.09231276024649643 0.11158729301001453 3.72622378660154 0.012900738659501242 0.12968183656618684 5.207462155815074e-06 5.283373877516636 0.41735001757565104 GDDDEES(ph)DEEAVK ddPTM_A549_MK2206_60min_R1 4 GDDDEESDEEAVK 13 0 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVK;GDDDEES(1)DEEAVK;GDDDEES(1)DEEAVK;GDDDEES(1)DEEAVK 188.09 2.2558000000000004e-25 27403500.0 4787.18 5275.969999999999 4813.79 4108.46 5731.530000000001 5775.59 4379.71 4920.87 5749.549999999999 5451.4400000000005 5911.4400000000005 True False 5595.1389486860235 5544.494337510102 5496.457806417744 5115.0328844357755 4888.42952951188 6386.759100273643 5175.446615115498 5618.418392032338 4447.286105144687 4219.955917810492 4443.466300555872 1.2591833875247525 1.247785841611197 1.2369752428931764 1.1511357436863854 1.1001387652923897 1.437337130130742 1.1647318253472647 1.2644224152953474 1.000859645225246 0.9496990935393345 1.0 12.117469831411743 -8.766623901579505 24.9838630669663 1.0004059233968223 1.2307745262256586 0.641330565097807 0.08272431131102044 55.57931934075279 267832.18373580475 0.013374040066170387 0.014446307736505012 1.7114968273886118e-09 8.766623901579505 0.2303686028288363 GDDDEES(ph)DEEAVK ddPTM_A549_PD325901_60min_R1 4 GDDDEESDEEAVK 13 0 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVK;GDDDEES(1)DEEAVK;GDDDEES(1)DEEAVK;GDDDEES(1)DEEAVK 211.06 2.2026999999999996e-37 37064600.0 7719.12 7832.040000000001 7412.66 8195.6 8652.62 8268.62 7560.39 7356.509999999999 7531.02 8242.99 9152.26 True False 8502.759379884197 8492.073497346766 7915.727683545692 8701.823598441928 8044.889821118509 8201.283100172222 7848.1047786541485 7209.778636979546 7214.517419227512 7722.526204642529 8026.590040956267 1.0593239889539943 1.057992678586465 0.9861881126549517 1.0841245851650865 1.0022798947085705 1.021764293220978 0.9777632517181786 0.898236810425239 0.898827195909459 0.9621179311809585 1.0 12.970571498327063 -7.798547640393223 2.6361774510271134 0.9465812943669959 1.03681761468811 0.59781900112937 0.036735684933612074 0.19111614690063433 2.725796807297181 0.007374125688703296 0.010831740727982644 1.590202235335843e-08 7.798547640393223 0.09023632032111417 GDDDEES(ph)DEEAVKK ddPTM_A549_MK2206_60min_R1 3 GDDDEESDEEAVKK 14 1 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK 208.13 1.5623e-38 434183700.0 37374.5 36540.39 36567.4 36711.5 46900.3 40431.0 38674.2 42781.0 47196.2 44926.1 45972.3 True False 43682.401881204736 38400.139774375304 41753.2071798729 45705.81914804188 40001.32799845172 44709.38158407428 45700.80153304668 48845.33776131769 36506.3360568444 34777.262807468454 34556.10913906677 1.2641007037398317 1.1112402620283062 1.208272812539233 1.3226552492962818 1.1575761564321765 1.293819897493289 1.3225100473299665 1.413508030222549 1.0564365308006518 1.0063998428616971 1.0 15.076653165286398 -8.899032177938059 7.803984817954457 1.024766478085715 1.2563719464449985 0.6478642381622853 0.07925484712049548 0.11069704003658709 7.637561627474676 0.014308451020715603 0.015191973525608402 1.2617340461725807e-09 8.899032177938059 0.23160546835928342 GDDDEES(ph)DEEAVKK ddPTM_A549_PD325901_60min_R1 1 GDDDEESDEEAVKK 14 1 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVKK 214.46 8.0702e-39 297940000.0 21863.0 23210.0 24666.0 22319.0 28071.0 23972.0 24173.0 25394.0 26038.0 27382.0 25887.0 True False 24082.515665310075 25165.9881555021 26339.983088707446 23697.593939873277 26099.38979969277 23776.779979891257 25092.916742973157 24887.496748792375 24943.7134095841 25653.095846958648 22703.063111213516 1.0607606360137025 1.1084842618911672 1.160195122555845 1.0438060196453642 1.149597729250981 1.0472939207990577 1.1052656912440701 1.096217573235742 1.0986937439848756 1.12993985530913 1.0 14.470599339498582 -10.724651570172147 0.5956934152667249 0.9849211195467036 1.0997363050239484 0.0 0.05227327544376421 0.6872459597354247 0.34591953852735435 0.042888656656395 0.006942424982858327 1.885160927435812e-11 10.724651570172147 0.11481518547724479 GDDGPDIADEES(ph)RGLEGK ddPTM_A549_MK2206_60min_R1 2 GDDGPDIADEESRGLEGK 18 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 GDDGPDIADEES(1)RGLEGK;GDDGPDIADEES(1)RGLEGK 56.528999999999996 0.0023611 7361400.0 858.99 1010.44 883.8499999999999 867.54 1034.4099999999999 992.8700000000001 976.4200000000001 1362.3000000000002 1226.52 1092.1399999999999 906.63 True False 1003.9665117108211 1061.8670800618102 1009.1932203528456 1080.08733894535 882.2496592746405 1097.9348443862339 1153.8228750148014 1555.410196868776 948.7151783499686 845.4248154758285 681.4887492849407 1.4731960179302206 1.5581579023512648 1.4808655629484013 1.5848938666685886 1.2945916718366228 1.6110828616587636 1.6930915972207352 2.2823710567501028 1.3921215564386324 1.2405557925393478 1.0 9.412546029512761 -9.64423841365105 1.332259507885191 1.0871601034240386 1.601806931843267 0.353497356070956 0.24763923618555758 0.2625836988519396 0.9481970651257775 0.06677212812049202 0.04875020354826496 2.2686191113208893e-10 9.64423841365105 0.5146468284192285 GDDGPDIADEES(ph)RGLEGK ddPTM_A549_PD325901_60min_R1 2 GDDGPDIADEESRGLEGK 18 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 GDDGPDIADEES(1)RGLEGK;GDDGPDIADEES(1)RGLEGK 88.87200000000001 1.8836e-06 9139900.0 1315.73 1446.5900000000001 1473.05 1544.94 1704.8799999999999 1309.55 1285.17 1234.54 1610.47 1572.99 1277.0 True False 1449.3019410107668 1568.4992161080474 1573.0200311692415 1640.3674349866856 1585.1351103167058 1298.8854589799184 1334.0778476220087 1209.916131222105 1542.7875464602853 1473.6711429518475 1119.9370955699635 1.2940922724531965 1.400524388657561 1.4045610573946503 1.4646960454076774 1.4153786999170623 1.1597842987055302 1.1912078391715952 1.0803429371239364 1.3775662513215734 1.3158517105836736 1.0 10.129201986178998 -7.261522467722447 24.999333959754928 1.1742030919582542 1.4004188328503047 0.5011249989027879 0.10302351136948204 6.1276382780294565 1843768.9392613326 0.020513109293393703 0.03408658271969865 5.4761776985745285e-08 7.261522467722447 0.22621574089205043 GDDLLPAGTEDY(ph)IHIR ddPTM_A549_MK2206_60min_R1 2 GDDLLPAGTEDYIHIR 16 0 K7EM18;P41567;O60739 K7EM18 EIF1;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b 1 GDDLLPAGT(0.033)EDY(0.967)IHIR;GDDLLPAGT(0.101)EDY(0.899)IHIR 70.529 0.00057208 2574380.0 107.94 301.83 137.27 341.86 242.89 377.89 162.57 249.97000000000003 479.59 228.02 412.91999999999996 True False 126.15763312036924 317.19185777983495 156.7369501135205 425.61571534667877 207.1612027544374 417.87806897691934 192.10686465983514 285.4040130010189 370.963630747857 176.5101236332323 310.3805679877545 0.4064611194517389 1.0219449620710443 0.5049831280665233 1.3712704957852602 0.6674425660649302 1.3463409506789934 0.6189397290729051 0.9195292567809173 1.1951896123938168 0.568689350553016 1.0 8.277894427244158 -4.925164045629427 0.6064618861080558 1.0576782753515934 4.657752977352919e-20 0.07802457984695743 0.3130298260663311 4.657733810494339 0.8760565214167143 0.04311268105522072 3.7622664687868266 1.1880533804309306e-05 4.925164045629427 -1.0576782753515934 GDDLLPAGTEDY(ph)IHIR ddPTM_A549_PD325901_60min_R1 2 GDDLLPAGTEDYIHIR 16 0 K7EM18;P41567;O60739 K7EM18 EIF1;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b 1 GDDLLPAGTEDY(1)IHIR;GDDLLPAGT(0.027)EDY(0.973)IHIR 108.89 2.4824e-07 3837200.0 479.08000000000004 605.96 645.6600000000001 588.39 631.03 492.42999999999995 624.28 527.47 621.1700000000001 689.41 466.20000000000005 True False 527.7158489199447 657.026375816805 689.4783702689871 624.7335139693552 586.7086297353185 488.41981334464583 648.0373170191239 516.94919705779 595.0643850768623 645.8805349445532 408.8603554852913 1.2906994817181028 1.6069701231780136 1.6863419527447703 1.5279875037721282 1.4349853730350857 1.1945883399844979 1.584984477768564 1.2643661585731494 1.4554220703803837 1.579709370887608 1.0 8.675464370717778 -13.170093433326368 0.23211609104865796 2.9737778049690486e-12 1.5280663665867764 0.0 0.22505482891511344 9.787636343284522 0.25690260760887484 4.773530464515301 0.0928843988373753 6.759375397730337e-14 13.170093433326368 1.5280663665838026 GDDLSTAILK ddPTM_A549_MK2206_60min_R1 1 GDDLSTAILK 10 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 118.18 0.00018827 1232900.0 905.8 1212.8 1470.9 1031.4 1417.7 1176.7 1433.2 1443.4 1799.7 1054.3 1961.4 False True 1058.6768953161989 1274.5263397123663 1679.4957377575383 1284.0930463013049 1209.1582080158344 1301.2176129697564 1693.5938883587119 1648.0063702271093 1392.070823530346 816.1328977568492 1474.3302481138753 0.7180731024616597 0.8644781868532372 1.1391584347578387 0.8709670360111361 0.8201406771398212 0.8825821857988849 1.1487208449567814 1.1178000128094907 0.9442055640595012 0.5535617944493344 1.0 10.525844007161805 GDDLSTAILK ddPTM_A549_PD325901_60min_R1 1 GDDLSTAILK 10 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 139.96 3.3821999999999997e-07 1541800.0 2174.4 2255.7 2467.7 2632.4 2748.4 2493.8 2657.2 2911.7 2997.0 3267.0 3317.2 False True 2395.1434872913233 2445.7957553798374 2635.172961485582 2794.997369385836 2555.361865465272 2473.4913196167554 2758.321200075631 2853.6238593155394 2871.046512348243 3060.7210624502914 2909.2054294633404 0.8232981634896626 0.8407091952358319 0.9058050472467636 0.960742524772968 0.8783710629663778 0.8502291706753204 0.9481355878620291 0.9808945873725892 0.9868833885951683 1.0520814485812715 1.0 11.50640945858529 -7.99626945061058 3.0941505001930834 0.9924894248130823 0.8802521825877175 0.6971483076232439 0.039221995411554134 0.11347786571654395 2.2420671132245706 0.0059747677318113465 0.008203292584885034 1.0086269065312265e-08 7.99626945061058 -0.1122372422253648 GDDQLELIKDDEKEAEEGEDDRDS(ph)ANGEDDS ddPTM_A549_MK2206_60min_R1 2 GDDQLELIKDDEKEAEEGEDDRDSANGEDDS 31 3 G3V4C1;G3V2Q1;P07910-2;P07910;G3V2D6;P07910-4;P07910-3 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 GDDQLELIKDDEKEAEEGEDDRDS(0.999)ANGEDDS(0.001);GDDQLELIKDDEKEAEEGEDDRDS(0.998)ANGEDDS(0.002) 110.57 2.8484000000000003e-15 54283000.0 7173.299999999999 7272.9 6437.9 5945.4 10435.099999999999 9679.599999999999 7734.5 9521.4 10987.5 10273.9 9927.9 True False 8383.977669653 7643.05954493245 7350.89102597679 7402.023266899151 8900.110613293378 10703.888847201531 9139.758533010361 10871.087608064578 8498.848793432051 7953.018854466557 7462.528433899125 1.1234768140471156 1.0241916814967496 0.9850402703438672 0.9918921358175167 1.192640094054975 1.4343514992289035 1.2247535957775766 1.4567566079456131 1.138869870810188 1.0657271091041127 1.0 12.865448808040147 -4.897386440732106 12.999225753262786 1.1191162601057045 1.2153260076117143 0.0 0.16252037230892916 9633723.855703535 20941558.72986444 0.024452515867654828 26058578.185438324 1.266524394861011e-05 4.897386440732106 0.09620974750600975 GDDQLELIKDDEKEAEEGEDDRDS(ph)ANGEDDS ddPTM_A549_PD325901_60min_R1 1 GDDQLELIKDDEKEAEEGEDDRDSANGEDDS 31 3 G3V4C1;G3V2Q1;P07910-2;P07910;G3V2D6;P07910-4;P07910-3 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 GDDQLELIKDDEKEAEEGEDDRDS(0.855)ANGEDDS(0.145) 120.95 1.6246e-21 437320000.0 6868.0 6698.4 6942.7 7032.4 7265.1 6037.9 7035.1 6005.4 6876.0 7388.6 6834.8 True False 7565.234304045627 7262.897676036846 7413.873371846633 7466.7753762608 6754.824439234373 5988.729344259366 7302.824580254435 5885.61758585484 6587.025631934107 6922.082535053638 5994.162929366943 1.262100212021532 1.2116617051655445 1.2368488242994136 1.245674410963898 1.126900372717724 0.9990935206180406 1.2183226692881541 0.9818914926418981 1.0989066712989362 1.1548038677995518 1.0 12.54934258342767 -2.4893207174083236 0.15229722986005004 0.982450881962907 1.9667059612263382 0.4065544435670062 0.07816726901435794 25.46902882081984 0.27539707845419403 0.11293014597604924 5.449373855292885 0.0032410018773079115 2.4893207174083236 0.9842550792634313 GDDQLELIKDDEKEAEEGEDDRDSANGEDDS(ph) ddPTM_A549_PD325901_60min_R1 1 GDDQLELIKDDEKEAEEGEDDRDSANGEDDS 31 3 G3V4C1;G3V2Q1;P07910-2;P07910;G3V2D6;P07910-4;P07910-3 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 GDDQLELIKDDEKEAEEGEDDRDS(0.015)ANGEDDS(0.985) 134.41 1.8480000000000002e-28 425750000.0 6395.4 6458.0 6533.4 6904.2 7280.1 5939.6 6020.1 6643.8 7157.5 6423.3 6824.0 True False 7044.656299955361 7002.238324352968 6976.795812525789 7330.656753424132 6768.770890981564 5891.229866868103 6249.198199825121 6511.284197039724 6856.69516587672 6017.731741792762 5984.6912609001065 1.1771127352851671 1.1700249886073188 1.165773723050246 1.2249014082510232 1.1310142154206182 0.9843832555502711 1.0441972572007385 1.0879899919950786 1.145705746038011 1.0055208329807286 1.0 12.547061107794566 -14.999989416776362 0.020167961776466143 1.6682780128228402e-05 1.9164131841187588 0.49959473268675647 0.056130222528495775 1825.5127299254211 2.8594907320557343 182.16688778050982 100.81612356659333 1.0000243690699054e-15 14.999989416776362 1.9163965013386306 GDDT(ph)DTRDDISILATGCK ddPTM_A549_PD325901_60min_R1 2 GDDTDTRDDISILATGCK 18 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GDDT(0.936)DT(0.064)RDDIS(0.001)ILATGCK;GDDT(0.686)DT(0.295)RDDIS(0.018)ILAT(0.001)GCK 65.454 0.00088614 5910800.0 3003.2 2716.5 3135.3 2728.4 3233.7 3049.5 2903.4 2914.0 3242.0 3340.5 3556.6000000000004 True False 3308.0826531610114 2945.428988557579 3348.0803120905066 2896.927071354016 3006.5760676593814 3024.665883058501 3013.890475801443 2855.877984011223 3105.75001435869 3129.5802599067024 3119.1607471449765 1.0605681852687325 0.9443017617009904 1.0733913970785456 0.9287520926921208 0.9639054577136988 0.9697050355057949 0.9662504500802372 0.9155917939225348 0.9957005316899549 1.0033404859852968 1.0 11.606942189132097 -3.849303852969726 12.099665680606964 0.9875280585595554 0.9864270322520676 0.0 0.04767896585073725 0.0 0.0 0.005695534491196172 0.0 0.00014148035700745483 3.849303852969726 -0.0011010263074877624 GDDTDTRDDIS(ph)ILATGCK ddPTM_A549_MK2206_60min_R1 1 GDDTDTRDDISILATGCK 18 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GDDT(0.001)DT(0.026)RDDIS(0.973)ILATGCK 78.413 2.508e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GDEASEEGQNGS(ph)SPK ddPTM_A549_PD325901_60min_R1 3 GDEASEEGQNGSSPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2 P35611 ADD1 Alpha-adducin 1 GDEAS(0.009)EEGQNGS(0.588)S(0.403)PK;GDEASEEGQNGS(0.5)S(0.5)PK;GDEASEEGQNGS(0.5)S(0.5)PK 93.05799999999999 2.552e-05 3736200.0 770.8499999999999 1295.3 877.77 1652.91 1198.85 724.46 766.6800000000001 641.57 1664.8400000000001 1027.22 806.02 True False 849.1061245302224 1404.4594768557452 937.340750659804 1755.0064966690238 1114.6469118079758 718.5602379539478 795.8564269433937 628.7733830480719 1594.872564437053 962.3611538935382 706.8846497817563 1.2011947420167854 1.9868297851556946 1.3260165586410724 2.482733918767178 1.5768441317152837 1.016516963801373 1.1258646332030362 0.8894992743755287 2.2561991761024296 1.361411871357877 1.0 9.465331003444485 -11.236838019232584 1.7181606005814247 0.9994287144152298 1.647824005313069 0.02112693568553836 0.5087680721180832 0.5579058961012968 2.968462140346013 0.399696804852821 0.08184234518045476 5.7964484886261805e-12 11.236838019232584 0.6483952908978392 GDEASEEGQNGSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 GDEASEEGQNGSSPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2 P35611 ADD1 Alpha-adducin 1 GDEASEEGQNGS(0.002)S(0.998)PK;GDEASEEGQNGS(0.016)S(0.984)PK 323.02 1.4930999999999992e-163 377560000.0 19944.0 21641.6 21202.3 21651.6 27515.0 21891.7 17374.4 19764.6 28796.0 34123.0 32232.0 True False 23310.05961601487 22743.06500125259 24209.104956595726 26956.242971977244 23467.579948900093 24208.265163465618 20531.103582123647 22566.292576548934 22273.75197776285 26414.590600547264 24227.90484205489 0.9621161948578063 0.9387136506238497 0.9992240399827503 1.1126113936681183 0.968617802566443 0.9991893777560501 0.8474155613524484 0.9314174182068884 0.919342886765016 1.0902548434438588 1.0 14.564382029709344 GDEASEEGQNGSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GDEASEEGQNGSSPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2 P35611 ADD1 Alpha-adducin 1 GDEASEEGQNGS(0.003)S(0.997)PK;GDEASEEGQNGS(0.003)S(0.997)PK 287.54 3.7565999999999996e-107 551290000.0 13818.8 14856.8 14207.7 14575.6 16497.5 14872.9 16463.3 13854.7 16750.9 16344.7 17227.3 True False 15221.67440313711 16108.834675944141 15171.91995984061 15475.901708410638 15338.772513285307 14751.780033494273 17089.819890563427 13578.357139698108 16046.91792582388 15312.692852596045 15108.451312852345 1.007494023572651 1.0662134948431674 1.0042008704713683 1.024320851154725 1.0152445274279722 0.9763925982900271 1.1311430626927055 0.8987259420922495 1.0621153415091067 1.0135183636968772 1.0 13.883068164620282 -11.344009252357262 1.980898505085389 0.9998065963821859 1.0277026684759438 0.0 0.05552794150065854 1.1271418937118491 7.983512240280043 0.03949209177677701 0.007520130786043156 4.528879313224143e-12 11.344009252357262 0.027896072093757884 GDERES(ph)LR ddPTM_A549_PD325901_60min_R1 1 GDERESLR 8 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GDERES(1)LR 40.589 0.027144 1267300.0 219.02 267.08 145.94 91.068 268.07 376.23 0.0 207.94 214.64 153.93 150.75 True False 241.2547491659978 289.58776891734146 155.84436600851222 96.69306352956586 249.24168799129495 373.16610761865905 0.0 203.79247357422577 205.6194272307062 144.21083353014185 132.2087056829852 1.824802292100848 2.1903835108387297 1.178775370376906 0.7313668417677424 1.8852138874193025 2.8225532175880326 0.0 1.5414451909308204 1.5552639001227944 1.090781675723653 1.0 7.04667336837636 -10.870746677602584 0.06865786178936208 3.9989623840026684e-20 2.391847053777835 0.09167476288258425 0.6922847588754599 143.9371120384591 2.1816969362283136 52.25058653088022 26.11709250121049 1.34664561852178e-11 10.870746677602584 2.391847053777835 GDFHSPIVLGRPPNTEDRES(ph)PSVK ddPTM_A549_PD325901_60min_R1 2 GDFHSPIVLGRPPNTEDRESPSVK 24 2 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 GDFHSPIVLGRPPNT(0.012)EDRES(0.923)PS(0.065)VK;GDFHSPIVLGRPPNTEDRES(0.733)PS(0.267)VK 90.37 5.6557e-08 8806600.0 4219.6 3744.2999999999997 2980.3 3902.5 4677.6 3774.9 3994.6000000000004 4189.9 4137.8 4475.200000000001 4844.9 True False 4647.970685694659 4059.845301621991 3182.561079999786 4143.54856177945 4349.061512843965 3744.158465964108 4146.616688928993 4106.3291575870335 3963.902655587103 4192.635108257592 4249.008014351539 1.0938954857217438 0.9554807352467616 0.7490127270295328 0.9751802180142078 1.0235474958283164 0.8811841383489416 0.9759022988244065 0.9664206665926282 0.9329007246393844 0.9867326901000091 1.0 12.052910349483989 -10.883031712193379 0.873540374046504 1.0038768885458393 0.9455581048211474 0.036123940775163677 0.0817411999322875 1.9186114282624624 2.299070391918559 0.07837338877578175 0.014435548966320317 1.3090863299944535e-11 10.883031712193379 -0.0583187837246919 GDFHSPIVLGRPPNTEDRES(ph)PSVKR ddPTM_A549_PD325901_60min_R1 1 GDFHSPIVLGRPPNTEDRESPSVKR 25 3 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 GDFHSPIVLGRPPNT(0.216)EDRES(0.618)PS(0.166)VKR 55.586999999999996 0.00096352 3242300.0 802.15 543.74 411.1 736.59 764.92 517.03 828.75 598.42 970.08 789.83 962.75 True False 883.5836774883811 589.5628780556959 438.9997181451238 782.087491382735 711.194658030744 512.8194791007501 860.2885347594007 586.484043648592 929.3109111440712 739.9599990067692 844.3378533750839 1.0464811851753646 0.6982547042028587 0.5199337165689112 0.9262731597979238 0.8423105220118644 0.6073628904008619 1.018891349381716 0.6946082558116171 1.1006386927097052 0.8763790419308057 1.0 9.72167658427326 -8.767063872658543 24.996838027539617 1.0475238392753083 0.7891791192415769 0.203908931217203 0.16451615932897223 102.9239933584539 457422.0263170982 0.025814458575348444 0.027855157432303414 1.7097638378152655e-09 8.767063872658543 -0.25834472003373143 GDFS(ph)YIGNLMTK ddPTM_A549_MK2206_60min_R1 1 GDFSYIGNLMTK 12 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 GDFS(0.987)Y(0.012)IGNLMT(0.001)K 43.382 0.030102999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GDFS(ph)YIGNLMTK ddPTM_A549_PD325901_60min_R1 2 GDFSYIGNLMTK 12 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 GDFS(0.998)Y(0.001)IGNLMT(0.001)K;GDFS(0.985)Y(0.002)IGNLMT(0.013)K 67.13600000000001 0.0017488 4898900.0 6012.200000000001 5942.6 5469.5 6147.0 6666.6 6284.3 7061.6 7370.4 6830.0 7209.1 6746.6 True False 6622.554118052285 6443.403757556517 5840.6931607753695 6526.686229150097 6198.361014521459 6233.122744353023 7330.333052255791 7223.391590033057 6542.958851964798 6753.916195687295 5916.810970221079 1.1192776229261279 1.088999427222831 0.9871353318825284 1.103074994621001 1.047584762419723 1.0534598410738354 1.2388993140306284 1.2208251415142233 1.1058252299921496 1.1414791227367769 1.0 12.530604089386506 -10.454449797149268 1.0555210682100444 1.0064648346085838 1.1050667710744462 0.0 0.0795607691178614 0.5718556040999943 1.2318512385084641 0.03544077006454426 0.013336683024221384 3.51196519200685e-11 10.454449797149268 0.09860193646586235 GDGEKS(ph)DEENEEK ddPTM_A549_PD325901_60min_R1 2 GDGEKSDEENEEK 13 1 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 GDGEKS(1)DEENEEK;GDGEKS(1)DEENEEK 84.581 0.00010202 23724000.0 7573.799999999999 6574.6 8655.9 7564.9 8683.900000000001 8236.8 6734.1 7051.2 8678.8 7591.5 7961.5 True False 8342.686600463128 7128.664615560703 9243.34142615514 8032.166691865562 8073.972821828658 8169.722231702336 6990.369860540911 6910.558284440606 8314.060217339975 7112.1713944265075 6982.28597210671 1.1948359940843207 1.020964286487084 1.3238273916423708 1.1503634660558137 1.156350922045171 1.1700641114298775 1.0011577710317932 0.989727191359299 1.190736135780391 1.0186021344354375 1.0 12.7694837309385 -7.721181204888887 24.610562515387468 1.0771734605999004 1.1682148580582683 0.3187705478810541 0.08674811347148259 181.46380866432114 110931.56634560873 0.014850590295898511 0.022026784173574586 1.900285240093216e-08 7.721181204888887 0.09104139745836792 GDGEKS(ph)DEENEEKEGSK ddPTM_A549_MK2206_60min_R1 2 GDGEKSDEENEEKEGSK 17 2 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 GDGEKS(1)DEENEEKEGSK;GDGEKS(1)DEENEEKEGSK 153.21 7.4713e-18 48574000.0 6533.8 7627.5 6816.5 6095.5 1570.8 671.03 750.4100000000001 1126.54 1368.37 9096.5 8521.3 True False 7636.545703926895 8015.707170313384 7783.182198942322 7588.897773637394 1339.7374008261781 742.0379492063362 886.7497835356266 1286.230494884057 1058.436379837873 7041.5943322063795 6405.2260340842095 1.1922367240891185 1.2514323659554403 1.215129982537006 1.1847978093598097 0.2091631729617373 0.11584883113534485 0.1384416067156653 0.2008095402160084 0.16524574998690164 1.099351419409066 1.0 12.645033767406753 -6.746805765482456 24.39265338472768 0.46965988321818386 1.2140970563233497 0.5791711641755176 0.32308151312283573 126.49062828328871 210844.38985254333 0.055177740777690054 0.11443964400560173 1.7914068664013083e-07 6.746805765482456 0.7444371731051659 GDGEKS(ph)DEENEEKEGSK ddPTM_A549_PD325901_60min_R1 3 GDGEKSDEENEEKEGSK 17 2 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 GDGEKS(1)DEENEEKEGSK;GDGEKS(1)DEENEEKEGSK;GDGEKS(1)DEENEEKEGSK 173.47 1.2093999999999999e-30 179335000.0 23037.300000000003 21965.2 22771.5 20491.800000000003 26233.1 21904.3 23128.6 22418.800000000003 21731.4 22870.0 22773.9 True False 25376.02973683609 23816.284490876093 24316.910926153458 21757.531945745563 24390.577555282 21725.918643147514 24008.771529455546 21971.63944679163 20818.10483097918 21425.984296981387 19972.854675646668 1.2705259287635848 1.192432673127883 1.217498015233826 1.0893551422208558 1.221186352746158 1.0877723287917573 1.2020701056184 1.1000750670650061 1.0423199472012954 1.0727552292815985 1.0 14.285752928258526 -7.766839743666712 0.2728505414155516 0.9767143638710629 1.2728805475587335 0.5900075406123063 0.053436004156741754 0.7896736455277553 0.144594448059129 0.03866272488698608 0.08145386486897098 1.7106464337504467e-08 7.766839743666712 0.29616618368767056 GDGEKS(ph)DEENEEKEGSKEK ddPTM_A549_MK2206_60min_R1 3 GDGEKSDEENEEKEGSKEK 19 3 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 GDGEKS(1)DEENEEKEGSKEK;GDGEKS(1)DEENEEKEGSKEK;GDGEKS(1)DEENEEKEGSKEK 127.05 1.0004999999999999e-16 79367000.0 13266.1 15589.599999999999 14589.0 14680.8 2923.51 1201.52 1704.01 1677.7599999999998 3483.12 21350.800000000003 20151.6 True False 15505.093354994717 16383.044051434617 16657.939573148917 18277.596659046158 2493.465551750278 1328.664048895573 2013.6065599372919 1915.5876179245088 2694.1988813996886 16527.6394512254 15147.40156413357 1.0236140693403217 1.0815745513888557 1.0997225829539001 1.2066489807944585 0.1646134184264563 0.0877156417402718 0.132934124140814 0.12646311711048114 0.17786541605783304 1.0911204394527967 1.0 13.886782709745578 -6.750580565377267 24.98326763380355 0.46315132883986765 1.101141382641797 0.500628677070639 0.33492830382008415 182.7628794546267 420486.2786324115 0.057335587959288725 0.11843199254451604 1.7759037922376365e-07 6.750580565377267 0.6379900538019294 GDGEKS(ph)DEENEEKEGSKEK ddPTM_A549_PD325901_60min_R1 2 GDGEKSDEENEEKEGSKEK 19 3 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 GDGEKS(1)DEENEEKEGSKEK;GDGEKS(1)DEENEEKEGSKEK 150.59 1.256e-21 165986000.0 8266.1 9296.5 9770.4 9259.6 10276.3 11037.7 11276.2 11580.3 10885.599999999999 9708.9 10307.7 True False 9105.268386818809 10079.948681069587 10433.478098188072 9831.544461922613 9554.528139310425 10947.81263073777 11705.32196157341 11349.321831930396 10428.116087693703 9095.878397068756 9039.918245893903 1.0072290632666494 1.115048654964118 1.154156245044268 1.087570063632852 1.056926387984788 1.2110521724807044 1.294848210257895 1.255467308798447 1.1535630969262742 1.0061903381925241 1.0 13.14209401009273 -10.490448675560064 1.001083089449786 1.0069709878334967 1.1504297685664522 0.3239680698170152 0.08017267730423053 0.5003614467130197 0.9544262134895968 0.04526718999359821 0.01572155288130472 3.2325952053375285e-11 10.490448675560064 0.14345878073295548 GDGFDS(ph)R ddPTM_A549_MK2206_60min_R1 1 GDGFDSR 7 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GDGFDS(1)R 54.722 0.047306 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GDGFDS(ph)R ddPTM_A549_PD325901_60min_R1 1 GDGFDSR 7 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GDGFDS(1)R 56.729 0.036896 4109400.0 1362.9 1299.9 1103.7 1277.0 1245.7 1168.3 1369.3 1396.3 1164.0 1413.9 1459.4 True False 1501.2606046860492 1409.447134999446 1178.603719087261 1355.877389722576 1158.206329431702 1158.7857521486305 1421.4094608097103 1368.449701123841 1115.0811279190361 1324.626112702316 1279.9030518988302 1.172948687370359 1.101213980940531 0.9208539016597513 1.0593594473511352 0.9049172339369125 0.9053699422229572 1.1105602558732437 1.0691823096238775 0.8712231182390974 1.0349425378251391 1.0 10.321818820010922 -5.617021371728805 4.088731269950847 0.960786809063251 1.1593074929658858 0.33077384973695156 0.07826856890087605 0.14937685390375996 4.478780840207841 0.011402108096396631 0.05141571874116559 2.4153419720004788e-06 5.617021371728805 0.19852068390263478 GDGGGDGGGGGPS(ph)R ddPTM_A549_PD325901_60min_R1 1 GDGGGDGGGGGPSR 14 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 GDGGGDGGGGGPS(1)R 51.875 0.022965 1787600.0 321.34 375.11 292.97 298.91 460.4 144.66 304.19 329.12 243.78 533.52 535.78 True False 353.96220024199476 406.72183614865935 312.8527059717269 317.37299182613566 428.06309229377507 143.48193692187013 315.7661169091552 322.5554434103546 233.5347743677859 499.8334561489069 469.8824565892523 0.753299458786585 0.8655820842960205 0.6658105693977996 0.6754306047726468 0.911000371031018 0.30535708432991115 0.6720108667201894 0.6864598558364915 0.49700679625911276 1.0637414722334193 1.0 8.87615609442765 -10.983948220774288 1.25986229681625 0.9997657683342475 0.6551467488951662 0.42853883862047715 0.15833041526329103 0.3818368974778235 1.0794508557011535 0.1123195060384417 0.025866901618574835 1.0376521236313701e-11 10.983948220774288 -0.34461901943908124 GDGPVQGIINFEQK ddPTM_A549_MK2206_60min_R1 2 GDGPVQGIINFEQK 14 0 P00441 P00441 SOD1 Superoxide dismutase [Cu-Zn] 0 ; 100.93 8.4555e-05 3194900.0 2125.55 1696.99 1761.16 1628.4099999999999 2238.21 1844.7 1549.99 1915.9 2597.1 1968.75 2053.04 False True 2484.2908752918383 1783.3595425696647 2010.918970364447 2027.3705231021022 1908.9722739388596 2039.904929587243 1831.6031196044642 2187.484692197673 2008.8609967164864 1524.0080076437416 1543.2135069785413 1.6098167000597559 1.1556142649770513 1.3030724272894854 1.3137330083842333 1.2370111234163816 1.3218552846787701 1.18687602935161 1.4174867458752036 1.301738863502845 0.9875548657085031 1.0 10.591721960407517 -10.591366489047239 0.6736602973069045 0.9761557035873512 1.3108396117287073 0.5312110656361202 0.11605209432580524 0.5372523471732304 0.39121472160246107 0.10162432810193985 0.021649004258463098 2.5623208525423692e-11 10.591366489047239 0.3346839081413562 GDGPVQGIINFEQK ddPTM_A549_PD325901_60min_R1 2 GDGPVQGIINFEQK 14 0 P00441 P00441 SOD1 Superoxide dismutase [Cu-Zn] 0 ; 174.73 2.4885e-22 4923800.0 3638.2 3981.5 3944.0 3652.6000000000004 5255.2 4683.0 4105.8 4297.9 4560.200000000001 5023.299999999999 5506.7 False True 4007.547385698716 4317.034978075468 4211.66355719866 3878.2128063435252 4886.092881455793 4644.8632006437 4262.048465779966 4212.175012862675 4368.550652522673 4706.127980718257 4829.410809847393 0.8298211818152105 0.89390510520928 0.8720864144774934 0.8030405693455751 1.0117368502784694 0.9617867237909454 0.8825193452355413 0.872192318838119 0.9045721775449286 0.9744724907481973 1.0 12.237631475056324 -14.99999999999935 0.14143756235711702 1.3775131785474182 0.8541798730975998 0.346825258612549 0.05286608121175947 53.34168090142958 0.5052538552197674 5.648057125338939 0.12435062240279128 1.000000000001497e-15 14.99999999999935 -0.5233333054498184 GDGRPET(ph)PK ddPTM_A549_MK2206_60min_R1 2 GDGRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GDGRPET(1)PK;GDGRPET(1)PK 59.198 0.0038805999999999997 31130000.0 3947.3 4350.9 3957.3 3429.6 6801.8 5045.299999999999 4665.299999999999 6170.9 7973.6 5203.1 5363.6 True False 4613.507737780561 4572.342225803543 4518.504645474137 4269.852153960595 5801.264230289974 5579.190297200909 5512.924621378663 7045.643972588662 6167.592331222738 4027.7160962901125 4031.6700921706874 1.144316779971599 1.1341062441301475 1.120752577014885 1.0590777658748534 1.4389233488017172 1.3838409814422645 1.3674046971463518 1.7475745315250297 1.5297859671603364 0.9990192660137909 1.0 11.977161873930893 -6.751535908127122 24.987147061581734 1.3240038155454157 1.1164013293651587 0.23293760857181944 0.2034744195657335 331.80629112008694 837164.0136346198 0.03550680322423021 0.07322107382148142 1.7720015273014637e-07 6.751535908127122 -0.207602486180257 GDGRPET(ph)PK ddPTM_A549_PD325901_60min_R1 1 GDGRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GDGRPET(1)PK 57.175 0.005558 18081000.0 3431.4 3317.0 2607.8 3453.7 3220.9 3192.1 3264.3 2822.8 3400.4 3689.4 3391.9 True False 3779.753201936831 3596.5352310125104 2784.7809899753206 3667.0272050782014 2994.675095501781 3166.1045959373832 3388.5247227935006 2766.4970395562377 3257.493013209529 3456.4506543630573 2974.717803025655 1.2706258046031647 1.2090340896720995 0.9361496364942096 1.2327311186790164 1.0067089699923222 1.0643377979306354 1.139107958189161 0.9300031877788101 1.0950595077947416 1.1619423700787417 1.0 11.538537098129467 -2.0000000016414843 0.6309093145022893 1.044815585759785 19.821511088313283 0.2903840648014495 0.09485152735288167 131.29456592410986 0.8362571766976075 0.013543752981574102 3436.5024408213694 0.009999999962203427 2.0000000016414843 18.776695502553498 GDGRPET(ph)PKQK ddPTM_A549_MK2206_60min_R1 2 GDGRPETPKQK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GDGRPET(1)PKQK;GDGRPET(1)PKQK 66.285 0.001807 80021000.0 6638.9 7850.7 7101.3 7258.799999999999 8331.8 6357.9 6467.4 6198.5 9056.3 11531.8 9665.099999999999 True False 7759.384014478595 8250.26709694911 8108.371121447831 9037.206325859912 7106.203257068718 7030.688757967545 7642.442864618423 7077.156357110113 7005.062509939357 8926.758370817075 7264.988926810148 1.0680517331339585 1.1356200511886492 1.1160885726233294 1.2439394494477083 0.9781437148299759 0.9677494114302143 1.051955197951555 0.9741455119075444 0.9642220491332646 1.2287366795391061 1.0 12.826744883587201 -6.787621867857431 24.997922498142525 0.9858812917549 1.1387720091849487 0.23629623076535178 0.0858780135439458 80.42021348801096 76781.61049971597 0.006212648321126765 0.011743438118740698 1.6307152481995718e-07 6.787621867857431 0.15289071743004867 GDGRPET(ph)PKQK ddPTM_A549_PD325901_60min_R1 2 GDGRPETPKQK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GDGRPET(1)PKQK;GDGRPET(1)PKQK 79.00399999999999 0.00034618 125629000.0 10247.900000000001 11238.7 11217.3 10523.0 11736.9 11829.7 11390.599999999999 14042.9 12382.599999999999 11819.7 12498.5 True False 11288.25926389475 12185.824691221082 11978.5734331046 11172.981810533029 10912.540634106885 11733.362845324538 11824.075516175486 13762.803343058074 11862.202383651427 11073.402124837383 10961.26373451934 1.0298319187727991 1.1117171328380084 1.0928095266407591 1.0193151155871694 0.9955549741715441 1.0704388772595348 1.0787146265753071 1.2555854576982848 1.0821929542936588 1.0102304253445609 1.0 13.420126517119945 -10.444652165274297 1.1250460918658332 1.006028121616623 1.0815418663516763 0.17121476765079624 0.06441638332798455 0.6242652364719863 1.5428670379077136 0.029907615297433167 0.011928313832836298 3.592095172112488e-11 10.444652165274297 0.07551374473505335 GDHNRT(ph)LDR ddPTM_A549_MK2206_60min_R1 2 GDHNRTLDR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GDHNRT(1)LDR;GDHNRT(1)LDR 57.019 0.0056868000000000005 1637640000.0 2023.3999999999999 2051.6499999999996 1625.34 1444.0 2200.8 1487.22 2067.33 1468.79 2136.9 3131.7 3115.6 True False 2364.9004526195586 2156.070221694324 1855.8376520544132 1797.7800648236225 1877.065235382131 1644.5966332632631 2442.9371010470372 1676.9954804807246 1652.8955619280969 2424.2467949398906 2341.9105338144145 1.0098167365803248 0.9206458532737368 0.7924460073338906 0.7676553134143288 0.8015102235032177 0.7022457132829096 1.043138525479056 0.7160800791776184 0.7057893707134592 1.0351577312355182 1.0 11.193470247398027 -11.052670134102286 1.3838457461321516 0.999138405500383 0.8126517793998679 0.27803860090000265 0.11334079769076179 0.4709343615332858 1.620558173151992 0.08034505880699315 0.018252071587993295 8.857881497256181e-12 11.052670134102286 -0.18648662610051514 GDHNRT(ph)LDR ddPTM_A549_PD325901_60min_R1 3 GDHNRTLDR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GDHNRT(1)LDR;GDHNRT(1)LDR;GDHNRT(1)LDR 64.12100000000001 0.0025413 737465000.0 3839.2 3733.0 3975.53 4344.7300000000005 4499.43 4161.3 3906.3300000000004 4487.47 4718.32 4716.45 5024.99 True False 4228.95275773034 4047.593010964642 4245.333372603955 4613.0941045022455 4183.405558990833 4127.411752474616 4054.987525775795 4397.963890497886 4520.025418799784 4418.65254208561 4406.948086036107 0.9596102960981626 0.9184571571854634 0.9633272935653029 1.0467775009919755 0.9492749806258002 0.9365691793721754 0.920135079109387 0.9979613566207669 1.0256588756109868 1.0026559096728616 1.0 12.105564186392163 -8.468946647787554 8.457248228723577 1.0121095914047757 0.9576086186861271 0.35392664834698684 0.03283166083814819 0.3057467277222881 45.26319137748004 0.005666748422389648 0.006835035562743527 3.396669974418263e-09 8.468946647787554 -0.05450097271864862 GDHRS(ph)PASAQK ddPTM_A549_MK2206_60min_R1 1 GDHRSPASAQK 11 1 Q7Z628;Q7Z628-2 Q7Z628 NET1 Neuroepithelial cell-transforming gene 1 protein 1 GDHRS(0.999)PAS(0.001)AQK 65.043 0.0016413 5946400.0 815.16 751.11 511.22 498.52 595.73 768.96 769.72 920.94 1064.8 1305.2 1160.1 True False 952.7390792514373 789.3382907497984 583.7186831575286 620.6574223794131 508.098906158759 850.3308368056629 909.5681605829385 1051.4860652604646 823.6245001361959 1010.3544134992312 872.0151528688215 1.0925717014401002 0.9051887322748619 0.6693905274893065 0.7117507308646269 0.5826721066568359 0.9751330971809149 1.0430646274787454 1.2058116900849785 0.9445070964954837 1.1586431843245966 1.0 9.768209394477346 -7.485864351727463 24.06964545430331 0.9993862320120728 0.7864427527383349 0.41266341910582105 0.14817443152241883 331.96966136504375 215872.52266843265 0.021731007567899148 0.03473182950167053 3.2668985510002413e-08 7.485864351727463 -0.2129434792737379 GDHRS(ph)PASAQK ddPTM_A549_PD325901_60min_R1 2 GDHRSPASAQK 11 1 Q7Z628;Q7Z628-2 Q7Z628 NET1 Neuroepithelial cell-transforming gene 1 protein 1 GDHRS(0.999)PAS(0.001)AQK;GDHRS(0.999)PAS(0.001)AQK 83.499 0.00016787 19342000.0 4769.1 5027.3 4002.8 4112.8 4934.1 4105.7 3439.1000000000004 3794.7 4150.3 4946.6 5589.3 True False 5253.255521174143 5450.968214310885 4274.454078791786 4366.838315153493 4587.545837720928 4072.2645404404943 3569.976832447728 3719.0117316154387 3975.877324057025 4634.270831807963 4901.851533491937 1.071688011209894 1.1120222995468354 0.8720080666634937 0.8908548709231681 0.9358802090141831 0.8307604815479859 0.7282915053742112 0.7586953024189459 0.8110970511635887 0.9454123202516995 1.0 12.25911107340813 -5.763454567467959 24.999787343452752 0.8798950016945741 1.0918552069058451 0.550387632707896 0.07843247332604072 35.817131629871334 444366.41052304464 0.013724743283419808 0.04600034601418791 1.7240324365421086e-06 5.763454567467959 0.211960205211271 GDIFLVR ddPTM_A549_PD325901_60min_R1 2 GDIFLVR 7 0 P55072;C9JUP7;C9IZA5 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 86.866 0.035962 4004300.0 1414.28 1719.27 1701.25 1690.16 1834.44 1824.31 1550.6 1824.5 1756.62 1656.06 2041.4 False True 1557.8566644620923 1864.158916678589 1816.7070554473178 1794.5573445681357 1705.595262874441 1809.453424208052 1609.608931520878 1788.10891620744 1682.7953702106006 1551.4960889750328 1790.320741500803 0.8701550668268307 1.0412429870615745 1.0147383166238668 1.0023663933333986 0.9526758101705632 1.0106867346524793 0.8990617682123055 0.9987645647832305 0.9399407219065868 0.8666023093015353 1.0 10.80600235858748 -6.755830286612828 24.99512381771702 0.969442551900814 0.9886778255138128 0.0014741047594538648 0.058661541078339624 460.6012929061123 2052499.441676806 0.006823657765924262 0.013890941009814781 1.754566016348101e-07 6.755830286612828 0.019235273612998816 GDKSELNEIKENQRS(ph)PVR ddPTM_A549_MK2206_60min_R1 4 GDKSELNEIKENQRSPVR 18 3 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR 177.22 1.7827e-31 1510700000.0 22408.4 24307.1 22984.5 21169.5 27780.300000000003 22315.5 21547.399999999998 21161.1 31822.8 30326.600000000002 33239.3 True False 26190.39008721958 25544.2275659816 26244.047715336277 26356.02845033497 23693.854670340876 24676.911398169956 25462.283665936702 24160.75072815082 24614.986610569234 23475.799997261558 24985.064451989165 1.0482418461455862 1.0223798947994276 1.0503894342864855 1.0548713412759139 0.9483207344079718 0.9876665095496812 1.0191001794237735 0.9670077407475841 0.9851880373520322 0.9395933335442147 1.0 14.608778319234025 -6.73956579018656 24.999996357364168 0.9898739303935233 1.0428869344366754 0.6109173601851253 0.02414039212257377 113.16429715541189 129338.26295755072 0.002629471097348045 0.005470042372825085 1.8215211145052534e-07 6.73956579018656 0.05301300404315201 GDKSELNEIKENQRS(ph)PVR ddPTM_A549_PD325901_60min_R1 4 GDKSELNEIKENQRSPVR 18 3 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR 174.99 2.8683e-31 2535540000.0 27502.6 26350.399999999998 27320.7 27942.300000000003 29718.4 27093.0 29404.800000000003 31464.1 30035.7 29450.4 32079.199999999997 True False 30294.64370565598 28571.040684736854 29174.84699471538 29668.232409432367 27631.08210691425 26872.36359065551 30523.815754923977 30836.523842391052 28773.40398096031 27590.896717963307 28133.661766803427 1.076811257516518 1.0155464625102415 1.0370085215547913 1.054545713080253 0.9821360026272087 0.9551676498209629 1.0849570883425077 1.0960721749621976 1.0227393866983838 0.9807076286997749 1.0 14.780009719937512 GDLAFGAPGPRPPS(ph)PFDDPADDPEHK ddPTM_A549_MK2206_60min_R1 4 GDLAFGAPGPRPPSPFDDPADDPEHK 26 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK 124.8 4.7275e-18 127148100.0 8546.800000000001 9721.899999999998 8406.199999999999 7683.3 12756.6 10331.2 9936.699999999999 9882.6 12207.7 12736.5 12946.7 True False 9989.29089080204 10216.7031844077 9598.325563082068 9565.708844916442 10880.121038565832 11424.44072670446 11742.069767271845 11283.488814193188 9442.675441691059 9859.315804116586 9731.67707925763 1.0264716769212878 1.0498399300757593 0.9862971700468985 0.9829455670395253 1.1180108988363402 1.1739436721605605 1.2065823466645047 1.1594598466736152 0.9703029976012504 1.0131157994474569 1.0 13.248472733598213 -8.783061965996437 24.999048967467534 0.9859764013995058 1.0876091046098246 0.25430884846487556 0.07087558133353054 240.58168652814834 278148.4301843976 0.013859928111023163 0.014761354714201935 1.6479272452286403e-09 8.783061965996437 0.10163270321031881 GDLAFGAPGPRPPS(ph)PFDDPADDPEHK ddPTM_A549_PD325901_60min_R1 2 GDLAFGAPGPRPPSPFDDPADDPEHK 26 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK 129.48 4.1864e-24 194649000.0 13407.6 11836.5 14933.4 14218.9 17203.9 14647.4 15736.099999999999 15797.5 17016.5 17314.0 17166.3 True False 14768.729681846546 12834.003395200361 15946.870325829217 15097.169159535119 15995.557414233002 14528.116430729991 16334.945896624335 15482.406469600988 16301.355681472749 16220.79108517427 15054.953926141481 0.9809880358519109 0.8524770954572864 1.0592440471132236 1.00280407589427 1.0624780050942735 0.9650057052319047 1.0850213143635246 1.028392816448098 1.0827901408032217 1.0774387729615316 1.0 13.877950672425795 -5.774190158394448 24.999931728626724 1.0373793779334861 0.9167325558889768 0.5177984603732372 0.045938277350844776 110.99238117740401 217619.72154508057 0.00608246423553229 0.019087103424040564 1.6819374536070873e-06 5.774190158394448 -0.12064682204450927 GDLAFGAPGPRPPS(ph)PFDDPADDPEHKEAEGSSSSK ddPTM_A549_MK2206_60min_R1 2 GDLAFGAPGPRPPSPFDDPADDPEHKEAEGSSSSK 35 2 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GDLAFGAPGPRPPS(1)PFDDPADDPEHKEAEGSSSSK;GDLAFGAPGPRPPS(1)PFDDPADDPEHKEAEGSSSSK 132.43 6.3484e-30 21911000.0 3462.2 3205.1000000000004 3187.2 3207.0 4032.0 3943.6 2973.8 2658.3999999999996 5459.5 5561.8 5780.9 True False 4046.5347173368755 3368.2258999110395 3639.1928855672204 3992.7151439677027 3438.898141158101 4360.909134450184 3514.1009665093065 3035.236341008554 4222.931967030017 4305.385517162143 4345.342985276592 0.9312348256622839 0.7751346467525494 0.8374926669535562 0.9188492502194406 0.7913985507726743 1.0035822601866722 0.8087050845965903 0.698503283007326 0.9718293771834945 0.9908045306780527 1.0 12.085254340557576 -8.964003393969087 24.991615495136823 0.9875718744409284 0.846881088428803 0.39107191882985615 0.0790871335626524 116.77931646685497 81077.66768256636 0.01312001495937918 0.013921236827034947 1.086417133339783e-09 8.964003393969087 -0.14069078601212537 GDLAFGAPGPRPPS(ph)PFDDPADDPEHKEAEGSSSSK ddPTM_A549_PD325901_60min_R1 2 GDLAFGAPGPRPPSPFDDPADDPEHKEAEGSSSSK 35 2 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GDLAFGAPGPRPPS(1)PFDDPADDPEHKEAEGSSSSK;GDLAFGAPGPRPPS(1)PFDDPADDPEHKEAEGSSSSK 168.48 2.4234999999999996e-63 44298000.0 3263.7 3372.2 2555.6 3472.8 3581.2 3916.2 3496.8 3543.8 3342.9 3934.1000000000004 4138.4 True False 3595.028421391048 3656.3871287369275 2729.0383840712193 3687.3069686989556 3329.6688664693033 3884.307765611973 3629.872637522383 3473.1161289426814 3202.409538247895 3685.7002546022936 3629.4030354790434 0.9905288517830707 1.007434857191142 0.7519248640599141 1.015954120458344 0.9174150222282551 1.07023323881121 1.0001293882323756 0.9569386742093431 0.8823515897636346 1.0155114266927425 1.0 11.825516557792668 GDLGIEIPAEK ddPTM_A549_MK2206_60min_R1 2 GDLGIEIPAEK 11 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70;P30613-2;P30613 P14618 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR 0 ; 169.65 1.3622e-14 44408000.0 10262.8 9452.7 11689.3 9161.3 13048.6 9532.8 9931.7 9371.6 14016.3 14903.8 13654.1 False True 11994.90973863003 9933.802054253872 13347.01851068678 11405.818911266388 11129.1682253759 10541.554568639493 11736.161331992893 10700.052999321308 10841.630429431782 11537.021228861355 10263.410136010845 1.1687060713421102 0.9678851300504411 1.3004467651406224 1.11130888857761 1.0843538432053301 1.027100586349242 1.1434953077451968 1.0425436436354063 1.0563380285653943 1.124092389953495 1.0 13.325222542160429 -8.601864832951666 0.31063903893092865 0.9937638280536849 1.1410386761874303 0.03636553269285081 0.08640664019072054 1.402551837230667 0.41711020892712364 0.06459027089084361 0.06755826378627691 2.501123674373259e-09 8.601864832951666 0.14727484813374536 GDLGIEIPAEK ddPTM_A549_PD325901_60min_R1 4 GDLGIEIPAEK 11 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70;P30613-2;P30613 P14618 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR 0 ;;; 159.83 6.6301e-13 84349500.0 12952.2 12810.3 12577.099999999999 12450.7 15103.800000000001 13364.3 13806.8 14763.099999999999 13953.0 14758.099999999999 13514.7 False True 14267.097809094312 13889.868938751752 13430.657638246257 13219.751461408672 14042.96119328132 13255.465571719544 14332.225329370862 14468.638389072092 13366.603932864542 13826.271047366905 11852.477576741881 1.2037228264485933 1.1718958208373111 1.1331519128626102 1.1153576436499482 1.1848122978808941 1.1183708626229123 1.2092176708686622 1.2207269151442144 1.1277476667911046 1.166530032041419 1.0 13.532901043235661 -10.058493829507757 0.7575662953619936 1.0064898577507932 1.1660483624805005 0.011539958966491959 0.05907686898939889 0.2391285156519027 0.27339186387648334 0.019246847226759355 0.007992874519074314 8.739894102168528e-11 10.058493829507757 0.15955850472970723 GDLS(ph)DVEEEEEEEMDVDEATGAVK ddPTM_A549_PD325901_60min_R1 2 GDLSDVEEEEEEEMDVDEATGAVK 24 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 GDLS(1)DVEEEEEEEMDVDEATGAVK;GDLS(1)DVEEEEEEEMDVDEATGAVK 66.012 6.6641e-05 41410000.0 623.5699999999999 321.38 466.16 657.97 464.42999999999995 704.13 662.9100000000001 862.04 473.40999999999997 829.38 791.79 True False 686.8743673520283 348.463820483208 497.79642084780085 698.6113125417103 431.8100389965202 698.3957987335575 688.1374028082712 844.8459359427026 453.51422402762114 777.0128052571233 694.4048495703536 0.9891554872881655 0.5018165133766155 0.7168677193942417 1.0060576520655917 0.6218419114781418 1.005747294486312 0.990974362051244 1.216647516885043 0.6530977200234449 1.118962239013569 1.0 9.439633213056352 -6.165761359872024 10.478762260207695 0.8770301101830548 0.7119246749125021 0.1048906922015247 0.20702941275511638 0.9323544201006102 97.58691888772971 0.02860316995255711 0.075782302734677 6.827137349166996e-07 6.165761359872024 -0.16510543527055266 GDLS(ph)DVEEEEEEEMDVDEATGAVKK ddPTM_A549_MK2206_60min_R1 4 GDLSDVEEEEEEEMDVDEATGAVKK 25 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK 156.73 7.1092e-41 29088100.0 4332.54 5360.81 4769.19 4149.67 5636.219999999999 4841.089999999999 3920.9300000000003 4530.36 6701.95 7018.17 6666.09 True False 5063.766831566841 5633.652331129167 5445.532855772573 5166.339336285767 4807.139504255484 5353.3709305445345 4633.31222766001 5172.552403645624 5183.969025814969 5432.760522669249 5010.7158782754295 1.0105874997864916 1.1243208491534222 1.086777416253503 1.0310581285770086 0.9593717985682294 1.0683844505641855 0.9246806923833579 1.0322980846054066 1.0345765259392774 1.084228412595423 1.0 12.290801019870388 -6.386337583060348 4.564556396621039 1.0111083740015965 1.0784993888330567 0.20966725832483235 0.04932043746648926 0.19570228451959437 6.405301017515719 0.0057524938364111105 0.013767722878700447 4.108302529639156e-07 6.386337583060348 0.06739101483146026 GDLS(ph)DVEEEEEEEMDVDEATGAVKK ddPTM_A549_PD325901_60min_R1 6 GDLSDVEEEEEEEMDVDEATGAVKK 25 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK 247.85 5.770199999999999e-113 333684000.0 19991.0 20614.8 19131.0 21209.3 25666.2 25850.600000000002 23496.4 25557.800000000003 23555.399999999998 24923.2 26392.4 True False 22020.471603403617 22352.081543646906 20429.344704048566 22519.350291184845 23863.49465558317 25640.0812843391 24390.568359723427 25048.029629293775 22565.448454110036 23349.544898580065 23146.302115208076 0.951360242936398 0.9656869348888635 0.8826180787913264 0.9729135210928013 1.0309851887703423 1.1077398522113175 1.053756588776996 1.08216118084954 0.9749051205584846 1.0087807884974616 1.0 14.498494104517231 -6.528127335597901 6.820082285786475 1.0115737089355783 0.9349242951173113 0.46602482929391387 0.04454908445556445 0.13130651756362727 32.362678298917835 0.0074697272343570995 0.016177534150557935 2.963962225275403e-07 6.528127335597901 -0.07664941381826695 GDLS(ph)YLDQGHR ddPTM_A549_MK2206_60min_R1 2 GDLSYLDQGHR 11 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 GDLS(0.995)Y(0.005)LDQGHR;GDLS(0.995)Y(0.005)LDQGHR 96.745 8.639200000000001e-05 6545700.0 443.85 339.3 428.22 547.86 570.67 453.36 244.223 415.46000000000004 575.91 608.3 533.37 True False 518.7610289093564 356.5689207325247 488.94803509588223 682.0857245943699 486.72519896197775 501.33425428398806 288.59515782628336 474.3527272928885 445.4673045392905 470.8846075173022 400.9195087368704 1.2939281267298648 0.8893778251298475 1.2195665824203787 1.7013034031278165 1.2140222372701324 1.2504611109184547 0.7198331623610084 1.1831619987447741 1.1111140636253187 1.174511584634189 1.0 8.647168810489037 -7.574058587282906 24.999412256444263 1.0404889241222364 1.2614684854426121 0.2198296317735039 0.20992029218268177 123.52128446817784 60334.9425263659 0.03158188436589289 0.046843509692365094 2.6664989236746537e-08 7.574058587282906 0.22097956132037577 GDLS(ph)YLDQGHR ddPTM_A549_PD325901_60min_R1 2 GDLSYLDQGHR 11 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 GDLS(0.983)Y(0.017)LDQGHR;GDLS(0.99)Y(0.01)LDQGHR 72.49600000000001 0.00060046 8647700.0 788.9200000000001 1247.91 791.97 1044.38 1096.21 958.04 1202.03 1055.8899999999999 791.69 1383.69 1319.7 True False 869.0105776277925 1353.0757552405255 845.7178467024902 1108.8889806409272 1019.2159913191985 950.2380398771492 1247.7739094260553 1034.8294456203187 758.4180224761359 1296.3235772579872 1157.385266267566 0.750839502588668 1.1690798169602061 0.730714198073242 0.9580984076434342 0.8806194627015189 0.8210213725474121 1.0780972816856242 0.8941097452860483 0.6552857069987995 1.1200449971498956 1.0 10.176653468220193 -8.539162630606679 24.91221430544245 0.8339277078167389 0.917755404355912 0.0 0.16663487358453916 582.7594786077374 891542.0217622466 0.027336865255043502 0.03100093076149203 2.889597609779124e-09 8.539162630606679 0.0838276965391731 GDMS(ph)DEDDENEFFDAPEIITMPENLGHK ddPTM_A549_MK2206_60min_R1 3 GDMSDEDDENEFFDAPEIITMPENLGHK 28 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK 184.55 7.099499999999999e-67 92662000.0 33052.0 40321.0 37600.9 31106.5 54614.0 43514.0 43580.0 44152.0 61856.0 52661.0 53585.0 True False 38630.369556183476 42373.16667508437 42933.27302049591 38727.59389642387 46580.352946728344 48118.62259774453 51497.9218913429 50410.681209829134 47845.71476373452 40764.843525347125 40278.36562923524 0.9590848325817968 1.0520080944974755 1.0659139801177449 0.9614986430411224 1.156460849864249 1.1946518148397411 1.278550434875743 1.2515572670912833 1.1878762709529274 1.0120778956273933 1.0 15.297717524005499 -6.770404634754182 24.96551314197024 1.1298114169662332 1.0166741918159363 0.36274645084031265 0.08840889844963443 238.7934159746973 664968.9228077133 0.015829890475039344 0.03022362659687314 1.6966621256143512e-07 6.770404634754182 -0.1131372251502969 GDMS(ph)DEDDENEFFDAPEIITMPENLGHK ddPTM_A549_PD325901_60min_R1 4 GDMSDEDDENEFFDAPEIITMPENLGHK 28 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK 217.51 1.0564e-90 824000000.0 32574.4 34357.1 35416.9 35592.4 38853.0 35341.4 35155.7 38850.799999999996 36037.6 36441.5 39124.9 True False 35881.329107994134 37252.49339325295 37820.50381312097 37790.86171179471 36124.0993155735 35053.59135580383 36493.56940143718 38075.890316136996 34523.064996129775 34140.577470854725 34312.78533317563 1.0457130996387503 1.0856738394022196 1.1022277394821072 1.101363860288435 1.0527883109695144 1.021589795623847 1.0635560199233678 1.1096706357826036 1.0061283180864609 0.9949812333610119 1.0 15.066458620666802 -8.817667941634644 10.508565547979963 1.0028428897499335 1.0724825983877944 0.6159341291858513 0.025459629418461308 0.23739646979140447 43.18419447496084 0.004616261071768102 0.004912638030540393 1.521710573756442e-09 8.817667941634644 0.06963970863786084 GDMS(ph)DEDDENEFFDAPEIITMPENLGHKR ddPTM_A549_PD325901_60min_R1 3 GDMSDEDDENEFFDAPEIITMPENLGHKR 29 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR 99.226 3.9533e-11 14132800.0 1688.5200000000002 1311.35 1242.4499999999998 1785.69 1321.83 1968.33 1859.22 1855.31 1890.08 1766.12 1866.3000000000002 True False 1859.9373073772754 1421.8620666832253 1326.7701284587913 1895.9880157037642 1228.9892208659437 1952.3005730777304 1929.9736345042215 1818.304386587462 1810.6465105302514 1654.6068817920757 1636.75693145045 1.136355234939527 0.8687069163184843 0.8106091399185603 1.1583809295517022 0.7508684993176393 1.1927858899290893 1.1791449282539044 1.1109190079776412 1.106240319340334 1.0109056818386635 1.0 10.676624373225309 -7.2851201126483955 24.983554461259597 1.0760612257267927 0.9451365671186563 0.2563653821607229 0.1279645806466455 946.6506440512626 998729.4356573247 0.01848681395480886 0.029563295578852466 5.1865657445286606e-08 7.2851201126483955 -0.1309246586081364 GDNNAVDDR ddPTM_A549_PD325901_60min_R1 1 GDNNAVDDR 9 0 H0YNX5;H0YKT4;H0YNG3;P67812-2;P67812-4;P0C7V7;P67812;P67812-3 H0YNX5 SEC11A;SEC11B Signal peptidase complex catalytic subunit SEC11;Signal peptidase complex catalytic subunit SEC11A;Putative signal peptidase complex catalytic subunit SEC11B 0 67.563 0.013458000000000001 1169900.0 471.55 469.32 611.43 450.99 602.97 603.72 629.77 590.5 608.68 633.35 899.01 False True 519.4214088632374 508.87124347868325 652.9253166272758 478.8466280273961 560.6194673335743 598.8035044827278 653.7362419733672 578.7220142617114 583.0992963417177 593.3601729118126 788.4374692939336 0.6587984831928305 0.645417377150265 0.828125681561009 0.607336214571608 0.7110512744094009 0.7594812877411471 0.8291542036412921 0.7340113031157335 0.739563147428671 0.7525773393839109 1.0 9.62285252967723 -14.999999999999998 0.1881184154122007 2.241616281790685 0.6681601165005102 0.10243528354296483 0.09747099166470233 17.304912441561477 0.19711315441823657 7.877708437861322 0.06103707962459285 1.000000000000004e-15 14.999999999999998 -1.5734561652901748 GDPEWSSETDALVGS(ph)RLSHS ddPTM_A549_MK2206_60min_R1 1 GDPEWSSETDALVGSRLSHS 20 1 Q7Z7N9 Q7Z7N9 TMEM179B Transmembrane protein 179B 1 GDPEWSS(0.003)ET(0.001)DALVGS(0.332)RLS(0.332)HS(0.332) 40.404 0.02677 1009500.0 476.91 448.84 392.05 316.03 419.16 394.7 330.33 607.59 752.13 381.38 564.29 True False 557.4007486699583 471.6840388493559 447.6485852116681 393.4573641871256 357.50211925789455 436.4668920193443 390.346685139222 693.7177431663363 581.7737559048057 295.2259931200865 424.16121938828354 1.314124731803228 1.1120395200900468 1.0553736757388088 0.9276127712820178 0.8428448969792115 1.0290117815315785 0.9202790526257253 1.6355048775246392 1.3715863905328916 0.6960230677049054 1.0 8.728468912590886 GDPGS(ph)SPAGPR ddPTM_A549_MK2206_60min_R1 1 GDPGSSPAGPR 11 0 H3BRW8;Q9P1Z2-4;Q9P1Z2-2;Q9P1Z2-3;Q9P1Z2 H3BRW8 CALCOCO1 Calcium-binding and coiled-coil domain-containing protein 1 1 GDPGS(0.5)S(0.5)PAGPR 87.568 0.00030723 13726000.0 1134.6 1093.0 1018.2 1014.2 1309.1 1284.5 1001.3 955.38 1797.4 1892.9 1548.5 True False 1326.092741693265 1148.6290314195396 1162.5960705586551 1262.6790455291684 1116.5331241542842 1420.4249374179074 1183.2232489628645 1090.8080407285408 1390.2917698579997 1465.2925753238553 1163.9647135741488 1.1392894700572793 0.9868246159219738 0.9988241542037034 1.0848086980677452 0.9592499765098395 1.2203333321473762 1.016545635073059 0.937148719379157 1.1944449463496842 1.2588805813746955 1.0 10.184831607235408 GDPGSS(ph)PAGPR ddPTM_A549_PD325901_60min_R1 1 GDPGSSPAGPR 11 0 H3BRW8;Q9P1Z2-4;Q9P1Z2-2;Q9P1Z2-3;Q9P1Z2 H3BRW8 CALCOCO1 Calcium-binding and coiled-coil domain-containing protein 1 1 GDPGS(0.132)S(0.868)PAGPR 76.30199999999999 0.0012425999999999997 20270000.0 1598.7 1692.1 1437.5 1630.7 1751.0 1891.2 1927.8 1813.7 1757.9 1674.1 2063.4 True False 1760.9988470992628 1834.6992054254656 1535.0573943897234 1731.424635411594 1628.0158006220674 1875.7986942253613 2001.1634839326368 1777.5243306798745 1684.0215762619205 1568.3970402963057 1809.614880970293 0.9731345965474362 1.0138616921859764 0.8482784986641162 0.956791775763485 0.8996476641201943 1.0365734245175866 1.1058504795559805 0.9822666410251822 0.9305966667111895 0.8667021125817393 1.0 10.82146698283686 -7.249979026104415 24.470196805841585 0.9836026834454414 0.9385597076963725 0.11060374323423872 0.0683304331062341 1074.7527306075349 2294814.2566908826 0.009501904949890031 0.016366753349477254 5.62368483658937e-08 7.249979026104415 -0.0450429757490689 GDPPRLS(ph)PDPVAGSAVSQELR ddPTM_A549_MK2206_60min_R1 5 GDPPRLSPDPVAGSAVSQELR 21 1 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 GDPPRLS(0.999)PDPVAGS(0.001)AVSQELR;GDPPRLS(0.985)PDPVAGS(0.012)AVS(0.003)QELR;GDPPRLS(0.994)PDPVAGS(0.004)AVS(0.002)QELR;GDPPRLS(0.931)PDPVAGS(0.058)AVS(0.012)QELR;GDPPRLS(0.997)PDPVAGS(0.003)AVSQELR 73.51899999999999 8.836799999999999e-05 172312400.0 8502.080000000002 10494.93 8843.55 9426.48 13982.2 11215.71 11202.05 10014.199999999999 14282.029999999999 13525.9 15802.29 True False 9937.02324810107 11029.077109529608 10097.698369464739 11735.968023170773 11925.436902108344 12402.548987814238 13237.31748331615 11433.74351720128 11047.173008715396 10470.389795854468 11878.145271982985 0.836580376865701 0.9285184561215902 0.8501073305848691 0.9880303493890107 1.0039813985300303 1.0441486194876035 1.1144262997472383 0.962586603833688 0.9300419178044904 0.8814835612888997 1.0 13.53602196183206 -6.269867000710535 24.292808591106287 0.985811025195806 0.8774136938603431 0.432705430438483 0.06033245878112473 308.25008592128705 888539.4989062642 0.008297967925406323 0.019598049970026687 5.3719628334414e-07 6.269867000710535 -0.10839733133546292 GDPPRLS(ph)PDPVAGSAVSQELR ddPTM_A549_PD325901_60min_R1 4 GDPPRLSPDPVAGSAVSQELR 21 1 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 GDPPRLS(0.989)PDPVAGS(0.008)AVS(0.003)QELR;GDPPRLS(0.998)PDPVAGS(0.001)AVSQELR;GDPPRLS(0.979)PDPVAGS(0.017)AVS(0.004)QELR;GDPPRLS(0.985)PDPVAGS(0.007)AVS(0.007)QELR 58.49 0.0014307 276361700.0 17849.4 17471.8 16430.3 17139.5 20962.3 17147.3 18013.300000000003 17551.199999999997 19838.8 17591.8 19541.800000000003 True False 19661.457947966217 18944.209903287436 17545.358961420163 18198.167988371257 19489.980364009127 17007.658073969185 18698.80598875598 17201.12754734996 19005.044227285376 16481.050745764627 17138.28248567669 1.147224522900604 1.10537388557576 1.0237524662161268 1.0618431574797746 1.1372189938109531 0.9923782087372714 1.0910548361181172 1.0036669404723486 1.1089235017084607 0.9616512482822392 1.0 14.064934916447255 -10.991400748489372 1.1958704280208774 0.9989286694319344 1.075269018850285 0.3237857569364586 0.05036141667819111 0.5577311794493194 1.385619007894749 0.03582331327387452 0.0077221260709023415 1.01999783866625e-11 10.991400748489372 0.07634034941835055 GDQCCYSHS(ph)PPTPR ddPTM_A549_MK2206_60min_R1 1 GDQCCYSHSPPTPR 14 0 Q9NXH9-2;Q9NXH9 Q9NXH9-2 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 GDQCCY(0.012)S(0.211)HS(0.566)PPT(0.211)PR 52.045 0.0069573000000000005 3205400.0 857.91 758.37 748.36 565.94 617.55 540.38 404.62 501.96 865.66 862.19 1200.8 True False 1002.7042341142857 796.9677937398312 854.488701004984 704.5953254060117 526.7092130635382 597.5626529247866 478.1342165138864 573.1143671880285 669.5893921749616 667.4206801830389 902.6082196059659 1.1108964136754889 0.8829609308097681 0.946688366496387 0.7806214369658667 0.5835413434341129 0.6620398972055149 0.5297250857327847 0.6349536318628052 0.7418383498294212 0.7394356329642132 1.0 9.817956106294071 -5.258574946542906 1.2394903456095892 0.7953999632463115 1.2373430419038107 0.3350171122478137 0.1424084262301909 1.9172076484329117 2.4165653868251993 0.027048964981560952 1.0825340531049468 5.513470477745686e-06 5.258574946542906 0.44194307865749927 GDQPAAS(ph)GDSDDDEPPPLPR ddPTM_A549_PD325901_60min_R1 1 GDQPAASGDSDDDEPPPLPR 20 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 GDQPAAS(0.5)GDS(0.5)DDDEPPPLPR 43.382 0.05155 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GDQPAASGDS(ph)DDDEPPPLPR ddPTM_A549_MK2206_60min_R1 6 GDQPAASGDSDDDEPPPLPR 20 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 GDQPAASGDS(1)DDDEPPPLPR;GDQPAASGDS(1)DDDEPPPLPR;GDQPAAS(0.008)GDS(0.992)DDDEPPPLPR;GDQPAASGDS(1)DDDEPPPLPR;GDQPAASGDS(1)DDDEPPPLPR;GDQPAAS(0.001)GDS(0.999)DDDEPPPLPR 480.16 0.0 1174769200.0 105790.79999999999 111694.2 100362.5 99928.98 138934.80000000002 112072.5 98523.7 105419.4 145641.6 154145.40000000002 141841.1 True False 123645.70070326421 117378.957695499 114595.41163960235 124411.58458598245 118497.67496581662 123931.93756229518 116424.18097857038 120362.92278337237 112654.01014184428 119323.84708137039 106618.04025478987 1.1597071228075717 1.1009296120524565 1.0748219660176515 1.166890558939843 1.1114223698225691 1.1623918172396484 1.0919744979399952 1.1289170434547076 1.0566130260191426 1.1191712659153825 1.0 16.70209204371673 -9.15235349746737 0.8448834434706595 1.0112052938692582 1.1268324410516983 0.15659997328282182 0.04410040044960739 0.1887965262756393 0.2861987338230122 0.008082012533661148 0.0067302791426311626 7.041197117829665e-10 9.15235349746737 0.11562714718244016 GDQPAASGDS(ph)DDDEPPPLPR ddPTM_A549_PD325901_60min_R1 5 GDQPAASGDSDDDEPPPLPR 20 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 GDQPAASGDS(1)DDDEPPPLPR;GDQPAASGDS(1)DDDEPPPLPR;GDQPAASGDS(1)DDDEPPPLPR;GDQPAASGDS(1)DDDEPPPLPR;GDQPAAS(0.026)GDS(0.974)DDDEPPPLPR 472.02 0.0 1451554000.0 122098.1 126254.8 121617.5 127872.90000000001 151931.0 129978.90000000001 132116.8 141508.80000000002 142443.9 140515.69999999998 145670.19999999998 True False 134493.4092281295 136894.73508725927 129871.19489543827 135771.31861257335 141259.89069349586 128920.39493276709 137144.5771210873 138686.295972494 136457.47824500556 131643.51472144062 127753.6888794799 1.0527555830893283 1.0715521116294562 1.0165749109441058 1.062758498822348 1.1057206404956137 1.009132464694525 1.0735077657950571 1.0855756666512204 1.06812945631446 1.030447855369799 1.0 16.96300542392688 -10.686298529826606 0.9323221295362061 0.999723643929876 1.0606861648082877 0.2634162071150662 0.027742881413818612 0.43703256170741867 0.6714059425978232 0.017841794103298704 0.004622519141782693 2.0592139429147994e-11 10.686298529826606 0.0609625208784117 GDQVLNFS(ph)DAEDLIDDSK ddPTM_A549_PD325901_60min_R1 1 GDQVLNFSDAEDLIDDSK 18 0 F8W126;Q96EZ8-3;Q96EZ8;Q96EZ8-2;Q96EZ8-4 F8W126 MCRS1 Microspherule protein 1 1 GDQVLNFS(1)DAEDLIDDSK 360.62 9.847199999999995e-246 69002000.0 42596.0 43462.0 46352.0 44176.0 53383.0 46765.0 47904.0 47990.0 45886.0 51329.0 49248.0 True False 46920.31456248217 47124.695269902266 49497.72545721914 46904.65118902467 49633.5622413523 46384.16134488635 49727.01293407461 47032.801802573274 43957.570992863344 48088.078180138036 43190.8082087937 1.0863495384401984 1.091081580184638 1.1460245248928067 1.0859868831876784 1.149169564075137 1.0739359430519404 1.151333234925438 1.0889539638898755 1.0177529158603134 1.1133868564734857 1.0 15.398436692804484 -8.726216475485316 3.334956258854123 1.0075262251189334 1.1120171821836218 0.24097150627459918 0.041150122708191 0.07319126991843096 1.655453282639386 0.0041732249033879995 0.004603114351283384 1.8783802986988457e-09 8.726216475485316 0.10449095706468836 GDRDES(ph)DDGGVAQR ddPTM_A549_MK2206_60min_R1 3 GDRDESDDGGVAQR 14 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 GDRDES(1)DDGGVAQR;GDRDES(1)DDGGVAQR;GDRDES(1)DDGGVAQR 134.21 1.6954e-09 18219400.0 749.77 914.52 627.34 706.24 1372.0099999999998 788.31 735.4 1097.45 1214.98 1420.48 1287.26 True False 876.3128458834468 961.065161769256 716.3062452408826 879.2688317043179 1170.189146490657 871.7284409621722 869.012660828214 1253.016898299669 939.7889699243755 1099.5925814337945 967.597815431359 0.9056581483627917 0.9932485857678474 0.7402933675718877 0.9087131220034187 1.2093755564846764 0.9009202243532889 0.8981135002261293 1.2949769814652476 0.9712599128858241 1.1364149069968619 1.0 9.918263701889273 -6.544986673416182 24.986115902950978 1.0112025324960279 0.8799878366995956 0.2348646957608097 0.13319580843949316 284.32931186700637 321344.74438897794 0.01743955298334297 0.03630537282532289 2.8511057540330654e-07 6.544986673416182 -0.1312146957964323 GDRDES(ph)DDGGVAQR ddPTM_A549_PD325901_60min_R1 4 GDRDESDDGGVAQR 14 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 GDRDES(1)DDGGVAQR;GDRDES(1)DDGGVAQR;GDRDES(1)DDGGVAQR;GDRDES(1)DDGGVAQR 104.88 6.2677e-06 33238600.0 1027.66 1092.1 745.3 1005.2900000000002 1209.77 743.52 1290.6599999999999 832.06 1284.1399999999999 1017.97 1012.24 True False 1131.9872866766932 1184.1350997252832 795.8805398529821 1067.3844801207588 1124.7999286799302 737.4650196332701 1339.776772576252 815.4639105615573 1230.172061517141 953.6952004721528 887.7408971180421 1.2751325193551086 1.333874673983652 0.896523459082177 1.2023603774320986 1.2670362853975472 0.8307210155884145 1.5091979843732524 0.9185832411336186 1.3857332308455832 1.0742945419865464 1.0 9.79399485172332 GDREEEVERPVS(ph)SPGDPEQK ddPTM_A549_MK2206_60min_R1 2 GDREEEVERPVSSPGDPEQK 20 2 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 GDREEEVERPVS(0.581)S(0.419)PGDPEQK;GDREEEVERPVS(0.5)S(0.5)PGDPEQK 124.86 1.5747e-15 79683000.0 2060.67 1610.57 1669.73 1482.52 1917.87 1602.93 1487.81 1743.1999999999998 2343.49 2047.31 2167.58 True False 2408.460717455544 1692.541133699329 1906.5228215418424 1845.737466552851 1635.7538635870271 1772.55098866118 1758.1258184754215 1990.3039383261028 1812.693256784536 1584.8212490814526 1629.310063835359 1.4782089492444932 1.0388084940168636 1.1701411928027565 1.1328337727246505 1.0039549253973794 1.08791508013437 1.0790615350014061 1.2215624162051588 1.1125526669352899 0.9726946909975007 1.0 10.67004546494717 -5.258092523533364 24.73710688907455 1.076941391015327 1.4782091239131627 0.7118252766750696 0.07241734152338122 113.43418616082525 838362.8153549168 0.0100481463936494 0.10041558722478938 5.519598354042527e-06 5.258092523533364 0.4012677328978358 GDREEEVERPVS(ph)SPGDPEQK ddPTM_A549_PD325901_60min_R1 4 GDREEEVERPVSSPGDPEQK 20 2 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 GDREEEVERPVS(0.5)S(0.5)PGDPEQK;GDREEEVERPVS(0.5)S(0.5)PGDPEQK;GDREEEVERPVS(0.568)S(0.432)PGDPEQK;GDREEEVERPVS(0.5)S(0.5)PGDPEQK 120.67 7.1156e-15 218250000.0 4322.37 3939.4900000000002 5178.74 4258.32 5222.05 4952.9400000000005 4221.61 5131.79 4946.18 4676.66 5441.19 True False 4761.173820439384 4271.484647941355 5530.200438693452 4521.346755053597 4855.271223094502 4912.604898782022 4382.265678703633 5029.432422638627 4738.3092554042805 4381.374889476212 4771.958124545287 0.9977400673215399 0.8951219890154377 1.1588954249719903 0.9474824877019283 1.0174588913764102 1.0294735977487517 0.9183369938145073 1.0539556910126646 0.9929486243879785 0.9181503221790545 1.0 12.220365667641598 GDREEEVERPVSS(ph)PGDPEQK ddPTM_A549_MK2206_60min_R1 2 GDREEEVERPVSSPGDPEQK 20 2 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 GDREEEVERPVS(0.43)S(0.57)PGDPEQK;GDREEEVERPVS(0.019)S(0.981)PGDPEQK 158.78 1.6322e-27 79226000.0 2413.1 2152.5699999999997 2134.33 2228.04 2827.6000000000004 2602.7400000000002 2407.62 2914.95 3281.5 3456.4 3256.1 True False 2820.3722853693084 2262.126618630154 2437.010087679684 2773.9099000205174 2411.663785699071 2878.160219241015 2845.0533892619305 3328.1530891599796 2538.245489478705 2675.5968394259453 2447.52050621168 1.1523385721228279 0.9242523659716002 0.9957056872433464 1.1333551212259418 0.9853497772861937 1.1759493789475486 1.162422697600013 1.3598060080449987 1.0370681197713236 1.0931866894007298 1.0 11.25710523196234 -4.889865322982398 19.00991749718632 1.0570746559801891 12.976929460665014 0.0 0.11840171168674093 898.1600199776078 154633.6635737891 0.016599663518004945 1183.2477401814836 1.288649106646799e-05 4.889865322982398 11.919854804684825 GDRGEVDSNGS(ph)DGGEASR ddPTM_A549_MK2206_60min_R1 2 GDRGEVDSNGSDGGEASR 18 1 Q7LBC6 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 GDRGEVDS(0.11)NGS(0.89)DGGEASR;GDRGEVDS(0.255)NGS(0.745)DGGEASR 87.156 2.1678e-06 8405300.0 356.6 452.18 313.70000000000005 310.74 314.09 414.14 207.33 333.32 703.1099999999999 584.201 763.69 True False 416.7853619670528 475.19403058306256 358.1873770715479 386.8713139496486 267.88777707250694 457.9640199161169 244.99917727701057 380.56913074968855 543.8567076359514 452.22958835478425 574.0446962282482 0.7260503662964479 0.8277997056767837 0.6239712332942235 0.6739393578437021 0.4666671059460342 0.7977846027063091 0.42679460133814295 0.6629607994816643 0.9474117803184202 0.7877950816829278 1.0 9.165019262070093 -8.772978696896939 4.943981781474221 0.9767611014366891 0.6466906251803825 0.43157369187886696 0.1280131375596032 0.08330220156202275 5.354620913984729 0.019364259442057014 0.02105917465055196 1.686635756566833e-09 8.772978696896939 -0.3300704762563067 GDRS(ph)EDFGVNEDLADSDAR ddPTM_A549_MK2206_60min_R1 2 GDRSEDFGVNEDLADSDAR 19 1 P04083 P04083 ANXA1 Annexin A1 1 GDRS(1)EDFGVNEDLADSDAR;GDRS(1)EDFGVNEDLADSDAR 163.74 1.7422000000000002e-27 7814400.0 910.02 981.3399999999999 889.0999999999999 804.16 1516.97 947.8299999999999 1011.59 1054.07 1263.43 1221.48 1167.81 True False 1063.6091281471047 1031.2860143579596 1015.1877492965033 1001.1792361001135 1293.825722518008 1048.128741481366 1195.3828087669476 1203.4876504539905 977.2651222831271 945.546819645297 877.8105470836465 1.211661367798254 1.1748389419382181 1.156499830936488 1.140541361033238 1.473923646527705 1.1940261426153609 1.3617776782682467 1.3710106975273222 1.113298450935568 1.077165024715972 1.0 9.777765794369477 -9.001371601819747 3.4698054430034166 1.0456045098319762 1.258406610666211 0.43111333993292533 0.1013920420977547 0.14912713747774112 3.689990785728641 0.019481655633401172 0.01975090946647728 9.968467520582827e-10 9.001371601819747 0.2128021008342349 GDRS(ph)EDFGVNEDLADSDAR ddPTM_A549_PD325901_60min_R1 2 GDRSEDFGVNEDLADSDAR 19 1 P04083 P04083 ANXA1 Annexin A1 1 GDRS(1)EDFGVNEDLADSDAR;GDRS(1)EDFGVNEDLADSDAR 112.88 4.2725e-11 12110000.0 964.79 726.3499999999999 843.53 1033.12 813.6099999999999 698.9300000000001 622.04 889.89 608.57 758.06 807.8399999999999 True False 1062.734770559141 787.5620636255467 900.7770183579581 1096.933476014243 756.4648404021245 693.238145809503 645.7120725933486 872.1404458448001 582.9939192591826 710.1959622286709 708.4808013196863 1.5000191516546197 1.1116208966545824 1.271420505227639 1.54828962756787 1.0677280725081872 0.9784854360459861 0.9114037690090988 1.2310008178348166 0.8228789237100576 1.0024208996288815 1.0 9.468584948752655 -6.949464746944187 6.209666216887825 0.9469124027562241 1.333830981702813 0.5747997452784055 0.14507945696967306 0.10271698829870465 8.92033293336189 0.02132102564617513 0.04046076532339883 1.1234021560771848e-07 6.949464746944187 0.38691857894658876 GDRS(ph)PEPGQTWTR ddPTM_A549_MK2206_60min_R1 2 GDRSPEPGQTWTR 13 1 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GDRS(1)PEPGQTWTR;GDRS(1)PEPGQTWTR 137.45 3.6674e-09 190407000.0 4293.5 3898.2000000000003 3395.6000000000004 3674.8999999999996 5846.700000000001 3989.4 4334.1 4565.9 6477.0 6082.299999999999 6123.4 True False 5018.137834003201 4096.60172944158 3877.147139254537 4575.250664972532 4986.658175076655 4411.555660050602 5121.549868500899 5213.130307482305 5009.969841643631 4708.304205659192 4602.790782757471 1.0902380905084068 0.8900256220178141 0.8423470286285291 0.9940166479241014 1.0833988357144522 0.9584523538581732 1.1127053368766517 1.1326020567806883 1.088463516615071 1.0229237929512212 1.0 12.168293151829998 -6.52001978586796 10.139281304274746 1.0506695550638703 0.9328284623316391 0.32342241468208566 0.07366958151237755 0.1005558219359304 199.46223903469107 0.010600757444170553 0.0229189084348926 3.019814138628873e-07 6.52001978586796 -0.1178410927322312 GDRS(ph)PEPGQTWTR ddPTM_A549_PD325901_60min_R1 2 GDRSPEPGQTWTR 13 1 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GDRS(1)PEPGQTWTR;GDRS(0.992)PEPGQT(0.008)WTR 105.02 2.988e-05 247700000.0 7371.6 7411.7 6532.700000000001 7236.299999999999 6880.5 7858.8 7047.299999999999 6348.799999999999 9149.1 8161.2 10390.900000000001 True False 8119.959405314895 8036.309970363412 6976.04830631635 7683.269816170303 6397.2374164364 7794.800538376831 7315.488857930525 6222.168203462751 8764.59514385229 7645.900439200898 9112.885173342154 0.8910415582836645 0.881862310069698 0.7655147819401176 0.8431215438384 0.7019991248381121 0.8553603375996546 0.8027631994453812 0.6827879519062093 0.9617804874235972 0.8390208253218625 1.0 13.153692173627242 -8.891286500709718 7.960687008135734 0.9831987870955887 0.8042958146405694 0.3155144215469545 0.0771726546899789 0.10995297545055997 7.424159107988915 0.010877710872596836 0.011553479576418953 1.2844390458908466e-09 8.891286500709718 -0.1789029724550193 GDRSEDFGVNEDLADS(ph)DAR ddPTM_A549_MK2206_60min_R1 2 GDRSEDFGVNEDLADSDAR 19 1 P04083 P04083 ANXA1 Annexin A1 1 GDRSEDFGVNEDLADS(1)DAR;GDRSEDFGVNEDLADS(1)DAR 84.762 2.4161999999999997e-05 3670800.0 402.39 505.99 409.93 369.58000000000004 543.95 470.93 379.32 330.37 737.0899999999999 678.63 626.96 True False 470.30359450903654 531.7427297419692 468.06423807121365 460.12711659107674 463.9356755662081 520.7635000219658 448.23753400239093 377.20095921569236 570.1402918908609 525.327011670996 471.26852878427417 0.9979524746162727 1.128322171467082 0.9932007114471942 0.9763586755475933 0.9844401805548473 1.1050249872729105 0.9511297840292964 0.8003949684243784 1.2097992059042115 1.1147084508829304 1.0 8.880405531465698 GDRSEDFGVNEDLADS(ph)DAR ddPTM_A549_PD325901_60min_R1 2 GDRSEDFGVNEDLADSDAR 19 1 P04083 P04083 ANXA1 Annexin A1 1 GDRSEDFGVNEDLADS(1)DAR;GDRSEDFGVNEDLADS(1)DAR 144.77 3.2199000000000003e-21 5915400.0 538.43 655.56 544.06 875.0799999999999 519.99 1016.39 791.23 858.48 596.2 785.7 602.76 True False 593.0910172287837 710.8063418880203 580.9831832985553 929.1317041491241 483.467696268115 1008.1128568230307 821.3406906276695 841.3569429354689 571.1437873413488 736.0907679115988 528.6243412104554 1.1219517736748768 1.3446341503314065 1.0990473536807017 1.7576407889609817 0.9145770608312516 1.9070496347455967 1.5537322567230745 1.5915970517152342 1.0804341435234166 1.3924647628334372 1.0 9.046099047094536 -8.861098749240874 6.737982212258569 1.0355486947031973 1.4143878988728043 0.08991135249534798 0.2985393736203755 0.19917605613050537 11.708048690167375 0.04596549676678298 0.048798985323886476 1.376896356628286e-09 8.861098749240874 0.3788392041696069 GDRSEDFGVNEDLADSDAR ddPTM_A549_MK2206_60min_R1 2 GDRSEDFGVNEDLADSDAR 19 1 P04083 P04083 ANXA1 Annexin A1 0 ; 208.87 4.7020999999999995e-66 49349000.0 3471.6 3567.0 3409.3 3025.6000000000004 3829.6 3170.6 2903.9 2618.3 5144.4 5161.0 5724.9 False True 4057.5212075289396 3748.5450641111597 3892.7900052598943 3766.872135824347 3266.2709130404423 3506.1107875260554 3431.5010413095615 2989.452043207458 3979.2016139187144 3995.12651552983 4303.249330797962 0.9428970751217298 0.8710964148145368 0.904616420294207 0.8753553062485102 0.759024323704425 0.8147589223875877 0.7974209202219872 0.6946964522395258 0.9246969692041621 0.9283976382537434 1.0 12.071210717298946 -8.970040980307758 10.741417062662466 0.9668726690977043 0.8318919524908417 0.39156388446737367 0.0668997921573155 0.30248504922543595 105.78955923164509 0.012516456002739887 0.013076433399581576 1.0714182007542488e-09 8.970040980307758 -0.13498071660686262 GDRSEDFGVNEDLADSDAR ddPTM_A549_PD325901_60min_R1 2 GDRSEDFGVNEDLADSDAR 19 1 P04083 P04083 ANXA1 Annexin A1 0 ; 291.28 1.8847999999999994e-143 76660000.0 5199.6 5441.799999999999 5505.8 5841.0 6335.1 7348.6 6330.4 5853.5 6599.8 7357.700000000001 6860.700000000001 False True 5727.4595642567865 5900.399583998763 5879.456697065003 6201.785304126523 5890.144430908541 7288.755438020562 6571.306836127798 5736.747350518081 6322.433357422735 6893.133566327063 6016.877393560572 0.9518989983718916 0.9806414852849641 0.9771607949594185 1.03073154037738 0.9789370874022355 1.2113850692422599 1.0921457105242982 0.9534426206951974 1.0507831461198092 1.1456330444267129 1.0 12.554799243805736 -6.235487277433378 1.7673685079690122 1.0358682127361583 0.9644449725964044 0.1858984761612359 0.07253817310071921 0.555742081722042 3.275783102073853 0.009739293156116682 0.035040604913658305 5.814504655295446e-07 6.235487277433378 -0.07142324013975387 GDRVYS(ph)PYNHR ddPTM_A549_MK2206_60min_R1 3 GDRVYSPYNHR 11 1 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 GDRVY(0.004)S(0.996)PYNHR;GDRVYS(0.999)PY(0.001)NHR;GDRVY(0.031)S(0.958)PY(0.012)NHR 80.469 0.00035984 24252900.0 2088.0899999999997 2879.6499999999996 2659.02 1924.7599999999998 2915.2 2427.09 2094.33 2208.87 3615.4399999999996 4202.299999999999 4024.7000000000003 True False 2440.5085431009074 3026.2118850203815 3036.109019384086 2396.3262864057597 2486.3779417420874 2683.9230528280495 2474.842651553376 2521.9840868806673 2796.548612671308 3252.9975113758974 3025.2559139308223 0.8067114361673516 1.000315996767466 1.0035874999543961 0.7921069670076698 0.8218735910217422 0.8871722357335162 0.8180605945292493 0.8336432218072302 0.924400676251436 1.0752801098235563 1.0 11.562841473377397 -9.53433913922138 1.111823017113421 0.9840317756239799 0.8753825630616345 0.3765572471015529 0.07508744568982578 0.40369004840607303 1.036050876194963 0.019881952061985512 0.014571719982184874 2.9218698076127525e-10 9.53433913922138 -0.10864921256234539 GDRVYS(ph)PYNHR ddPTM_A549_PD325901_60min_R1 3 GDRVYSPYNHR 11 1 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 GDRVY(0.013)S(0.984)PY(0.003)NHR;GDRVYS(1)PYNHR;GDRVY(0.014)S(0.836)PY(0.149)NHR 111.12 1.9828e-05 37986300.0 6120.03 5795.92 6226.620000000001 6973.38 6629.62 8263.03 7092.24 7804.42 8002.339999999999 8355.94 8333.75 True False 6741.330940272035 6284.36251918301 6649.195876907793 7404.109844904951 6163.978362147382 8195.738623278867 7362.139074222642 7648.754720650955 7666.029478686959 7828.344522366357 7308.751581993884 0.9223642183817318 0.8598407605842565 0.9097580896426966 1.013047134225494 0.8433695266553033 1.1213595825955005 1.0073045980055315 1.046520002060915 1.0488835737109026 1.0710918868350323 1.0 12.835409283140667 -7.254970716614372 24.999952419236052 1.030401697583999 0.9126547337576377 0.6311574076410604 0.05201329606360021 289.26219322016533 1117933.4686093505 0.007248215609891689 0.012357601446170005 5.5594174176133365e-08 7.254970716614372 -0.11774696382636118 GDRYDDYRDYDS(ph)PERER ddPTM_A549_MK2206_60min_R1 1 GDRYDDYRDYDSPERER 17 3 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3 P52756 RBM5 RNA-binding protein 5 1 GDRY(0.003)DDY(0.011)RDY(0.164)DS(0.822)PERER 47.498999999999995 0.007073100000000001 28723000.0 741.57 551.68 865.05 754.45 804.05 542.92 577.97 493.06 999.63 776.44 795.68 True False 866.7288863541987 579.7581555842007 987.7270976593643 939.290283868548 685.7753101185943 600.371434038871 682.979667635141 562.9527649329218 773.2154010810908 601.0416647390007 598.0906963491632 1.449159620179421 0.9693482261522088 1.6514670829835694 1.5704813494042278 1.1466075535109832 1.003813364266707 1.141933275010217 0.9412498277757393 1.292806268014058 1.0049339814309948 1.0 9.224220465588783 -6.87715861919522 7.903338884948101 1.1154276006337625 1.3951501269816249 0.41747298317100057 0.18618921102569808 0.22105200910134823 14.466580337872593 0.028019355061319296 0.05313413276997407 1.3269097364081398e-07 6.87715861919522 0.27972252634786243 GDRYDDYRDYDS(ph)PERER ddPTM_A549_PD325901_60min_R1 2 GDRYDDYRDYDSPERER 17 3 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3 P52756 RBM5 RNA-binding protein 5 1 GDRYDDYRDYDS(1)PERER;GDRYDDYRDYDS(1)PERER 105.67 3.3843e-09 68579000.0 1400.3 1492.36 1945.55 1802.26 1751.43 1684.55 1583.44 1555.94 2082.3 1818.31 1953.72 True False 1542.457425153623 1618.126414637876 2077.5867225425586 1913.5815069705654 1628.4155989054873 1670.8315833107715 1643.6986756916162 1524.9055560886827 1994.7881723933078 1703.5015962852744 1713.424825651488 0.9002189078048063 0.944381329377916 1.2125345048345537 1.1168167277154823 0.9503863691751531 0.9751414583802815 0.9593059765937733 0.8899751732667202 1.1642110832816015 0.994208541152402 1.0 10.74266718148626 -8.772343400027523 24.99952592768055 1.0775441080465387 1.0001615816063525 0.047693331091099966 0.0996327651458614 395.14564200113307 905942.865572659 0.019090260138372464 0.020418706073157367 1.6891048151481697e-09 8.772343400027523 -0.07738252644018617 GDS(ph)DDEKPR ddPTM_A549_MK2206_60min_R1 2 GDSDDEKPR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GDS(1)DDEKPR;GDS(1)DDEKPR 93.258 0.00027373 15216400.0 3525.3 3080.6000000000004 2381.8 2082.41 675.34 468.72999999999996 707.9 609.5 662.74 3698.7 3694.9 True False 4120.284454689995 3237.3893816935324 2719.575054858186 2592.600543482938 575.9983806174886 518.3306974822078 836.5162667939798 695.8984915154663 512.6304481783079 2863.161101141286 2777.354355947773 1.4835285407014427 1.1656378577550188 0.9791962804581089 0.9334784875148611 0.20739103002250103 0.1866274990701816 0.30119176726677294 0.2505616505237016 0.18457509646923417 1.030895137672928 1.0 11.43949554354518 -6.146063040715498 1.4875540517629855 0.5033119859753832 1.3583471101238684 0.5440678946068788 0.30845958334610707 0.3242367977962481 1.302639510214433 0.05479245611704656 0.2464923908626117 7.14392619736719e-07 6.146063040715498 0.8550351241484853 GDS(ph)DDEKPR ddPTM_A549_PD325901_60min_R1 2 GDSDDEKPR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GDS(1)DDEKPR;GDS(1)DDEKPR 108.37 0.00012464 33734000.0 2865.6000000000004 2821.4 2245.46 2483.78 2622.29 1762.1999999999998 1826.58 1971.19 2310.2 2613.95 2797.8 True False 3156.5136024567755 3059.169279704162 2397.8504186478963 2637.197449526343 2438.1093968093905 1747.8492274555483 1896.091501442928 1931.8730690813602 2213.1103279369045 2448.904750900503 2453.6883367154614 1.2864362418097992 1.246763590113977 0.9772432720031956 1.0747890879477096 0.9936508073690707 0.7123354671014338 0.7727515646836632 0.7873343326346777 0.9019524993542587 0.9980504509299817 1.0 11.260736296649963 -5.752509594869307 1.063324329252289 0.9129474932741476 1.3616051791555488 0.6417346208974649 0.10409618274089673 0.510861514546041 0.7426977550616822 0.017624246654598316 0.21151276710185468 1.7680331561409434e-06 5.752509594869307 0.4486576858814012 GDS(ph)DDEYDR ddPTM_A549_PD325901_60min_R1 1 GDSDDEYDR 9 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 GDS(1)DDEYDR 67.726 0.0047848 1818900.0 624.64 532.44 622.48 925.92 659.77 809.76 593.49 638.04 711.6 658.27 566.53 True False 688.0529929643359 577.3105873983422 664.7252360763243 983.1119754831067 613.4300312829363 803.1655830350725 616.0755867201897 625.3137916673031 681.6939266556587 616.7067198589386 496.8504015295626 1.3848292984088426 1.161940466629556 1.3378780293423456 1.978688096973615 1.2346372859808128 1.6165139055186697 1.239961937886314 1.258555472114471 1.372030543916342 1.241232205831768 1.0 8.956667720717373 -10.736693728044443 0.4067382185546754 0.8766852414169329 1.4308830796695378 0.16672378253357079 0.22554687321307787 2.0486514026044795 0.4270907992241394 0.48378801231501356 0.06499375189639353 1.8336070578304582e-11 10.736693728044443 0.5541978382526048 GDS(ph)EALDEES ddPTM_A549_MK2206_60min_R1 1 GDSEALDEES 10 0 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GDS(1)EALDEES 64.297 0.006120399999999999 381160.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GDS(ph)ES(ph)EEDEDLEVPVPSR ddPTM_A549_PD325901_60min_R1 1 GDSESEEDEDLEVPVPSR 18 0 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 2 GDS(1)ES(1)EEDEDLEVPVPSR 58.83 0.0057745 668110.0 0.0 0.0 181.39 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 193.70021618667974 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GDS(ph)ESEEDEQDSEEVR ddPTM_A549_PD325901_60min_R1 2 GDSESEEDEQDSEEVR 16 0 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 GDS(0.5)ES(0.5)EEDEQDS(0.001)EEVR;GDS(0.914)ES(0.086)EEDEQDSEEVR 67.93 0.002107 1486850.0 0.0 148.39 0.0 146.83 0.0 0.0 160.68 0.0 176.17 0.0 0.0 True False 0.0 160.8953460747503 0.0 155.8993556248754 0.0 0.0 166.79476532746975 0.0 168.76618754767753 0.0 0.0 0.0 GDS(ph)GSTPMPR ddPTM_A549_PD325901_60min_R1 1 GDSGSTPMPR 10 0 Q7L4E1;Q7L4E1-3;Q7L4E1-2 Q7L4E1 FAM73B Protein FAM73B 1 GDS(0.431)GS(0.284)T(0.284)PMPR 44.203 0.021006999999999998 3279300.0 491.71 579.53 349.62 431.43 561.15 485.19 642.29 452.14 304.69 623.53 450.27 True False 541.6280372222299 628.3690269607118 373.34731563585063 458.07845125137936 521.736759862406 481.2387735042321 666.7326974245741 443.12171300303163 291.8849388880166 584.1602093877048 394.8896444967013 1.3715934179852982 1.591252228864059 0.9454472175680702 1.1600163682063989 1.3212216808758688 1.2186664811572492 1.6884025871945691 1.12214062632056 0.7391557184540323 1.4792998943596873 1.0 8.625305725136565 -8.536460021100142 8.100280091172406 0.8791939162040601 1.3191788956488892 0.04742976447398228 0.2667316169120925 0.09722321944445249 39.287196696510655 0.03458532659549896 0.03963269574424375 2.9076356089940845e-09 8.536460021100142 0.43998497944482917 GDS(ph)IGSSK ddPTM_A549_PD325901_60min_R1 1 GDSIGSSK 8 0 H7C0E9;B5MCU0;A0A0U1RRA6;B5MCG9;Q9Y2K5-3;Q9Y2K5-2;Q9Y2K5;H0YIX9 H7C0E9 R3HDM2 R3H domain-containing protein 2 1 GDS(0.785)IGS(0.107)S(0.107)K 82.914 0.0034476999999999997 16696000.0 11423.0 9857.6 8397.8 9080.0 11466.0 9006.3 7132.5 7870.9 9027.7 10575.0 13719.0 True False 12582.654550831856 10688.33454725021 8967.725208073758 9640.850977823804 10660.66771555261 8932.955678829252 7403.931190553757 7713.908724898402 8648.297163672414 9907.292695259213 12031.649971906296 1.0457962607133806 0.8883515205484945 0.7453445893965706 0.8012908454231159 0.8860520161777556 0.7424547505693364 0.6153712257123349 0.6411347357104181 0.7187956085712305 0.8234359143087256 1.0 13.554546881004395 -4.360959576565128 16.133002892826685 0.8287609930774698 0.8077278149861287 0.0 0.13186825988514483 0.0 0.0 0.020501596215378334 0.0 4.35552412319924e-05 4.360959576565128 -0.021033178091341087 GDS(ph)LILEHQWELEK ddPTM_A549_MK2206_60min_R1 3 GDSLILEHQWELEK 14 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK 120.24 7.1975e-07 10038400.0 2098.41 1716.7700000000002 1454.65 1492.01 2619.17 2149.9399999999996 2295.42 2365.2 3165.4 2556.88 2616.48 True False 2452.5703068011317 1804.146260082455 1660.9412434081198 1857.5525169788748 2233.8935625935187 2377.445223785328 2712.468101602256 2700.474343121215 2448.4419541051025 1979.2790321697178 1966.735804825631 1.247025808338591 0.9173302563851015 0.8445167059717903 0.9444850256049331 1.1358381522888752 1.2088279564301265 1.3791725838045343 1.3730742769289426 1.2449267197442309 1.006377688001261 1.0 10.941587455462448 -6.830012602380875 5.321320738672195 1.1675228950284924 0.9731404896131571 0.29322884237373725 0.1491337790581609 0.23874251948469374 12.602810902050559 0.02455303591424062 0.04748770712816836 1.4790654679433603e-07 6.830012602380875 -0.19438240541533525 GDS(ph)LILEHQWELEK ddPTM_A549_PD325901_60min_R1 2 GDSLILEHQWELEK 14 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK 179.46 6.429700000000001e-24 8111100.0 2255.31 1488.04 1722.19 1825.6000000000001 2145.71 1655.5700000000002 1488.6299999999999 1527.98 1835.79 2249.8 2262.03 True False 2484.26741092853 1613.4423530768347 1839.0681697697655 1938.363165761578 1995.0027318976463 1642.087586822485 1545.2806292595928 1497.5032402228778 1758.6381304316908 2107.747244046731 1983.814650189606 1.2522679024933565 0.8133029730991389 0.9270362881905292 0.9770888452589642 1.005639680958587 0.8277424439150806 0.7789440556414382 0.754860460416376 0.8864931662157078 1.0624718613935429 1.0 10.954061524225699 -7.226726833433024 24.622707358776815 0.9078191971678803 0.9801908476426283 0.13485334577089048 0.12956121039068225 1214.6187953501176 861567.4409438787 0.018867332782477722 0.03267822883800351 5.932983855574965e-08 7.226726833433024 0.07237165047474803 GDS(ph)LKEPTSIAESSR ddPTM_A549_MK2206_60min_R1 7 GDSLKEPTSIAESSR 15 1 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 GDS(1)LKEPTSIAESSR;GDS(0.999)LKEPTSIAESSR;GDS(0.999)LKEPT(0.001)SIAESSR;GDS(0.999)LKEPTSIAESSR;GDS(1)LKEPTSIAESSR;GDS(1)LKEPTSIAESSR;GDS(0.998)LKEPT(0.002)SIAESSR 154.52 1.7972e-19 652787200.0 27360.5 34052.6 28199.699999999997 28702.0 37917.3 30983.3 26948.5 31607.0 39716.9 42233.5 39103.8 True False 31978.28349999875 35785.73188958554 32198.841495710978 35733.99128848174 32339.715398743578 34261.93224094997 31844.693622965915 36087.38904237792 30721.08556485657 32692.92301756037 29393.24725002314 1.087946603108766 1.2174814026224126 1.0954502992412867 1.2157211139185584 1.1002430294161567 1.1656395752913282 1.083401685839282 1.227744207212407 1.045174944555756 1.1122596540446763 1.0 14.84319713060119 -8.916573900965721 6.685934300811273 1.019680450774426 1.1485457330158828 0.3192529006429137 0.058705206631847064 0.10273819574737401 6.719202542861967 0.008126680395021015 0.008602429319079006 1.2117864696914008e-09 8.916573900965721 0.12886528224145688 GDS(ph)LKEPTSIAESSR ddPTM_A549_PD325901_60min_R1 4 GDSLKEPTSIAESSR 15 1 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 GDS(0.994)LKEPT(0.005)S(0.001)IAESSR;GDS(0.997)LKEPT(0.003)S(0.001)IAESSR;GDS(1)LKEPTSIAESSR;GDS(1)LKEPTSIAESSR 169.98 2.9192999999999996e-27 901579000.0 32293.6 35590.1 33254.8 37142.9 40667.1 36517.6 35223.0 35544.7 37668.0 38196.6 37561.3 True False 35572.02249870817 38589.4026304668 35511.670705357516 39437.1325753537 37810.78318987875 36220.212772971674 36563.43053976517 34835.73307422227 36084.94495399852 35784.86015732744 32941.49822069859 1.0798544213255215 1.1714525663626127 1.0780223312078736 1.1971869740452066 1.1478161356401384 1.0995314338864202 1.1099504428973046 1.0575029963978217 1.0954251294898534 1.0863155014255619 1.0 15.00761855168773 -10.437937239247857 0.2867609559339115 0.9539625202535047 1.1402986839341935 0.2654392686657804 0.04460266956085424 1.6782159950193538 0.2064282713448635 0.10581334505138575 0.021212169456046377 3.6480666204677716e-11 10.437937239247857 0.18633616368068884 GDS(ph)LSR ddPTM_A549_MK2206_60min_R1 1 GDSLSR 6 0 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 GDS(0.905)LS(0.095)R 75.692 0.045644 71320000.0 1636.7 1317.2 1236.6 792.91 735.38 598.55 524.06 781.97 972.65 2039.8 1628.1 True False 1912.9349465268508 1384.2398537839138 1411.9684746148428 987.1729855950821 627.2065761519954 661.8881637146661 619.2749184574839 892.8166421826888 752.3463280028838 1579.0077632973744 1223.7978367259104 1.563113521792639 1.1311017328542123 1.1537595771474436 0.8066471078557526 0.5125083223140788 0.5408476333684734 0.5060271393470199 0.7295458574851605 0.6147635707672721 1.2902521281797452 1.0 10.257149538736936 -5.757635920743021 1.3109536277437182 0.7437780163918538 1.5408088524911956 0.5312253704301146 0.23292196273125734 0.3565627202370491 0.9049412239288632 0.03134762111059459 0.2974096510978035 1.7472863302467313e-06 5.757635920743021 0.7970308360993418 GDS(ph)PELK ddPTM_A549_MK2206_60min_R1 1 GDSPELK 7 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 GDS(1)PELK 50.607 0.051777 5125700.0 1184.3 1161.9 1360.8 1163.8 1648.8 1022.9 1172.1 1307.7 1530.4 1602.9 1539.5 True False 1384.1808866449257 1221.0357471238453 1553.781902196246 1448.9310522449675 1406.2637041521527 1131.142599053933 1385.0553980918548 1493.07047966329 1183.7668435466137 1240.803776737602 1157.1996619615131 1.196146984953891 1.0551642791306444 1.3427085690316445 1.2521011713648056 1.2152299645235491 0.9774826559632657 1.1969026984886209 1.2902444830760307 1.0229581656981024 1.072246922915943 1.0 10.176422091605563 -8.84943129592216 8.325171496943758 1.01028206259538 1.1871109020226953 0.33773521373106075 0.09789568209838177 0.18396918421586558 15.487676933905552 0.0167355611018344 0.01779037727011962 1.414388459363184e-09 8.84943129592216 0.17682883942731542 GDS(ph)PELKPR ddPTM_A549_MK2206_60min_R1 2 GDSPELKPR 9 1 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 GDS(1)PELKPR;GDS(1)PELKPR 70.488 0.00098525 13465900.0 2674.07 2954.6 2263.48 2632.8 3930.7000000000003 3254.6000000000004 2731.5 3472.0 4591.8 4819.9 4809.0 True False 3125.3876412653867 3104.976519883048 2584.475499693681 3277.8361181908854 3352.499236966806 3598.999611771366 3227.778192891305 3964.166632554055 3551.7646315978423 3731.0812424340706 3614.792578352006 0.8646105062797987 0.8589639523102638 0.714972005633571 0.9067840123997544 0.9274388956766144 0.995631017205463 0.8929359355835732 1.096651203804709 0.9825638828817951 1.032170217671267 1.0 11.819697150436449 -6.771222059720428 1.8268080558851933 0.9923596239894512 0.8181514921893935 0.6244361681698483 0.060581191095168414 0.15916587869023366 1.0781473171175253 0.00831474917874616 0.0197236120441165 1.6934716876566438e-07 6.771222059720428 -0.17420813180005768 GDS(ph)PELKPR ddPTM_A549_PD325901_60min_R1 2 GDSPELKPR 9 1 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 GDS(1)PELKPR;GDS(1)PELKPR 66.267 0.0015185 54810000.0 10145.2 10318.5 10308.2 10217.8 12372.0 11274.6 9947.4 11129.4 10371.1 10877.3 11237.599999999999 True False 11175.133235498493 11188.076207778895 11007.7764402422 10848.930299692516 11503.033401082941 11182.783395681712 10325.953750426146 10907.4153861546 9935.238733471759 10190.505421668364 9855.446441015678 1.1339043139629514 1.1352175951377683 1.1169231658984862 1.1008055662037013 1.1671752740911316 1.1346805507604425 1.0477408418001588 1.1067398571373606 1.0080962636176487 1.0339973417397168 1.0 13.266705509928933 -8.460776660107053 1.030516550572006 1.000632293268479 1.1301684612422742 0.7216737658594786 0.028797217438489592 0.13557506309875317 0.2811476933912402 0.005343048985321091 0.006446655765349885 3.4611732605387092e-09 8.460776660107053 0.1295361679737952 GDS(ph)PENR ddPTM_A549_MK2206_60min_R1 2 GDSPENR 7 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GDS(1)PENR;GDS(1)PENR 76.679 0.01757 142002000.0 2543.2 2316.3 2040.73 1029.3500000000001 144.07600000000002 0.0 0.0 66.438 167.73199999999997 3466.3 3583.0 True False 2972.4299847296916 2434.18977628278 2330.1362002270334 1281.5407962092781 122.88261125632314 0.0 0.0 75.85578995784171 129.7409698129643 2683.2604225500972 2693.2422142306596 1.1036623327169939 0.903813910022987 0.8651788494606863 0.47583570071708453 0.045626275500595954 0.0 0.0 0.02816523131749231 0.04817278190852417 0.9962937638405412 1.0 11.395128267771481 -10.96919510376294 1.2776069454915457 0.9948753896654904 0.3426858795246122 0.25912230718699236 0.3928035542743598 0.5445272404757652 1.600566486608673 0.3020815615132438 0.07220076169904034 1.0735070384580105e-11 10.96919510376294 -0.6521895101408781 GDS(ph)PENR ddPTM_A549_PD325901_60min_R1 2 GDSPENR 7 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GDS(1)PENR;GDS(1)PENR 95.60799999999999 0.011874 425500000.0 4699.9 4239.0 3560.1 3760.2999999999997 3849.3 3244.5 2443.0 2885.3 4375.6 4641.0 6111.6 True False 5177.0303881164855 4596.235406771796 3801.7097946204235 3992.565190739078 3578.9384473640935 3218.0778677105454 2535.969701860896 2827.750428025938 4191.708748558881 4347.966467961984 5359.911944624428 0.965879746085874 0.8575206932982287 0.7092858677339356 0.7448938027318356 0.6677233664171458 0.6003975253619653 0.4731364485202551 0.5275740454769878 0.782048061957965 0.8112011004812596 1.0 12.387993584207603 -9.821877673093674 1.0720071314667425 0.964311255239956 0.695062107408296 0.21047574563807325 0.14209036519693066 0.35200998827805563 0.826051636278368 0.046740465504110235 0.028798496063622503 1.5070314891234593e-10 9.821877673093674 -0.26924914783166 GDS(ph)RS(ph)PSHKR ddPTM_A549_MK2206_60min_R1 2 GDSRSPSHKR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GDS(0.97)RS(0.885)PS(0.145)HKR;GDS(0.865)RS(0.978)PS(0.157)HKR 40.552 0.031045999999999997 117848000.0 4445.1 3009.1 2173.4300000000003 1399.56 2921.0 2475.8 2209.69 1961.5900000000001 3317.8 5056.0 5214.2 True False 5195.324207739056 3162.2503370947247 2481.6550556219768 1742.4522628286352 2491.324769425303 2737.787512696968 2611.1620703093513 2239.6513896174283 2566.3235974378954 3913.8460884554956 3919.370235400923 1.3255507634398342 0.806826134599976 0.633176991856224 0.44457455105677074 0.6356441519412771 0.6985274031956596 0.6662198040707039 0.5714314430895627 0.6547795802137022 0.9985905524067281 1.0 11.936406145315402 -10.702147867573862 0.9736645740968287 0.9990479569651386 0.6985931146390454 0.2041310733648377 0.212869686308368 0.6959842669049098 1.1789971528456153 0.14310913468256398 0.03791362852926823 1.9854188114909134e-11 10.702147867573862 -0.3004548423260932 GDS(ph)RS(ph)PSHKR ddPTM_A549_PD325901_60min_R1 2 GDSRSPSHKR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GDS(0.982)RS(0.912)PS(0.105)HKR;GDS(0.991)RS(0.815)PS(0.193)HKR 57.042 0.004422 246600000.0 7313.5 7936.0 5398.1 5372.299999999999 6281.200000000001 4564.4 3238.6 4472.3 4453.6 6852.6 8732.3 True False 8055.961136085856 8604.794571394421 5764.447527412295 5704.134769621451 5840.030180963641 4527.229039721997 3361.8466952299195 4383.096468048524 4266.43067981119 6419.925666527969 7658.282458610487 1.0519279198207483 1.123593262314285 0.7527076153911137 0.7448321213600686 0.7625770154765553 0.591154617786638 0.4389818100075523 0.5723341351976967 0.557100198754655 0.8382983653612582 1.0 12.902805156409526 -5.7806893388881395 8.167073090742328 0.7285319320122025 1.0882229702784767 0.4952309964495647 0.1497820622592954 0.13778984726363616 46.15845341300982 0.028038842824119694 0.09151797892787367 1.6569547985950835e-06 5.7806893388881395 0.35969103826627424 GDS(ph)RSPSHKR ddPTM_A549_MK2206_60min_R1 1 GDSRSPSHKR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GDS(0.478)RS(0.478)PS(0.044)HKR 41.54 0.017997 1583800.0 365.16 247.25 0.0 162.25 97.319 145.88 202.78 207.53 128.1 453.5 501.53 True False 426.79008069514606 259.8339689098636 0.0 202.00125728367934 83.00350401769978 161.31692477269314 239.6225011731647 236.94801303396986 99.08555453366517 351.05403503057124 376.98625947616614 1.1321104416065026 0.6892398923793954 0.0 0.5358318830091214 0.22017647044493258 0.42791194829447604 0.6356266180792038 0.6285322265146117 0.26283598418506704 0.9312117516388303 1.0 8.55836813038576 -10.947882651946376 1.1641470386823234 1.004934903538693 0.47140977841306814 0.27942981805582634 0.2818703692399486 0.4795884796806928 1.1374460625320983 0.20855683119656085 0.04682670281273508 1.1275020704526568e-11 10.947882651946376 -0.5335251251256248 GDS(ph)RSPSHKR ddPTM_A549_PD325901_60min_R1 2 GDSRSPSHKR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GDS(0.999)RS(0.001)PSHKR;GDS(0.984)RS(0.015)PS(0.002)HKR 63.76 0.0013112 16717700.0 3072.0 2863.2 2164.8999999999996 2024.99 2742.3 2151.5099999999998 1683.3700000000001 2390.8999999999996 2368.9 2957.0 4066.0 True False 3383.8671785131273 3104.491912401274 2311.8231326012615 2150.0690332140325 2549.690308421414 2133.988815890866 1747.4315665254085 2343.2116238752337 2269.3433710716554 2770.2945153552237 3565.9077764976278 0.948949717885498 0.8706035340741346 0.6483126534674135 0.6029513851661618 0.7150185782218057 0.5984419535344329 0.4900383509754437 0.6571150379488208 0.6363999052439221 0.7768833881834596 1.0 11.800053676321006 -10.693313541921514 0.9351693137505097 1.001528551366593 0.678351531287644 0.1880571441145349 0.13696452322167765 0.4186890131468382 0.6463056772180673 0.09096649817263444 0.023427245205487952 2.0262193481895084e-11 10.693313541921514 -0.323177020078949 GDS(ph)TYR ddPTM_A549_PD325901_60min_R1 1 GDSTYR 6 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;A0A669KBC6 Q60FE5 FLNA Filamin-A 1 GDS(0.844)T(0.156)YR 79.469 0.043426 10239000.0 1275.9 911.35 1032.9 1164.0 984.71 1307.7 1334.9 912.29 1338.6 1210.4 1734.0 True False 1405.4284287320631 988.1526628831031 1102.9988053322752 1235.897636364196 915.547366665081 1297.0505247665537 1385.7003499853079 894.0936602723403 1282.343297106893 1133.9751374318432 1520.7289927316494 0.9241807287487335 0.6497887970874467 0.7253092501057565 0.8127007785550154 0.6020450527615081 0.8529136558623063 0.911207951323534 0.5879375382107374 0.8432424864889635 0.7456786467882818 1.0 10.570547359698109 -9.815892018194315 0.6657875570408586 0.9938364704973448 0.754146127249165 0.0 0.1328610822117227 0.4783309835506326 0.4425536626348362 0.05241198727883473 0.02437802778690091 1.5279459153537494e-10 9.815892018194315 -0.23969034324817984 GDS(ph)VSDSGSDALR ddPTM_A549_MK2206_60min_R1 1 GDSVSDSGSDALR 13 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 GDS(1)VSDSGSDALR 101.6 0.00014121 3858600.0 559.28 530.03 689.81 561.62 959.19 725.37 676.06 865.36 1254.7 907.91 934.35 True False 653.6727909168067 557.0062630588274 787.6354305952328 699.2169252120801 818.09442163131 802.1281719383629 798.8913509376155 988.027430053853 970.512453344182 702.8125004291203 702.3251082518608 0.9307267862654756 0.7930889220880302 1.1214684215914132 0.9955744383857824 1.1648372128793851 1.1421037956836249 1.1374950739353675 1.4067949706555791 1.3818564108577285 1.0006939694616253 1.0 9.45599520248096 -6.199787596597561 0.9066767736972294 1.1986565091950165 0.8453444103401774 0.3871352081967113 0.13661107487786694 0.698724236045092 0.8787453921670118 0.02595692490571004 0.17608789815668718 6.312660066210204e-07 6.199787596597561 -0.35331209885483916 GDS(ph)VSDSGSDALR ddPTM_A549_PD325901_60min_R1 1 GDSVSDSGSDALR 13 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 GDS(0.512)VS(0.488)DSGSDALR 145.29 1.8531e-12 7416000.0 1228.9 907.45 1074.5 1394.0 1060.2 1432.8 966.81 1239.4 1426.8 1372.1 1324.5 True False 1353.6570233316347 983.9239961960515 1147.4220314933978 1480.104213996297 985.7352094914426 1421.1317518433254 1003.6024836087323 1214.6791947095091 1366.8365578306539 1285.465371835949 1161.5948966972721 1.1653434662810995 0.8470457291036771 0.9877987883347528 1.274199997094196 0.8486049760498724 1.2234314698557875 0.8639866501327141 1.0456994931392778 1.176689534119803 1.1066382742304346 1.0 10.181891304845896 -8.53477894571847 24.70665261694181 1.0848976577285423 1.0257857183920407 0.03529288624687732 0.14375446926717556 606.4150612671647 1259006.1958073655 0.023527625257260546 0.026686248935015165 2.918912351521118e-09 8.53477894571847 -0.05911193933650161 GDSES(ph)EEDEDLEVPVPSR ddPTM_A549_MK2206_60min_R1 2 GDSESEEDEDLEVPVPSR 18 0 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 GDS(0.012)ES(0.988)EEDEDLEVPVPSR;GDS(0.017)ES(0.983)EEDEDLEVPVPSR 153.74 2.6137000000000002e-18 4610700.0 1660.08 1424.97 1384.3400000000001 1114.22 1972.7600000000002 1831.69 1916.35 1461.35 2278.01 1878.96 1833.27 True False 1940.2609189407308 1497.4948864610255 1580.6602281645726 1387.2039500192366 1682.5696172993694 2025.5182200225827 2264.525989363812 1668.5008376966791 1762.0443722344628 1454.5016310056064 1378.0184633219767 1.4080079262968372 1.086701612728053 1.1470530114335982 1.0066657210637922 1.2210065845149956 1.4698774174184024 1.6433204994254864 1.2107971570093765 1.278679799388695 1.0555022807889325 1.0 10.428379502722148 -10.543134104620052 0.8925856941705814 1.0036531381907972 1.2695369000547532 0.23190215381164525 0.17196909542392533 0.6984919952012859 1.0147261972915291 0.11589972470023283 0.03424636023500095 2.863293684662358e-11 10.543134104620052 0.265883761863956 GDSES(ph)EEDEDLEVPVPSR ddPTM_A549_PD325901_60min_R1 2 GDSESEEDEDLEVPVPSR 18 0 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 GDS(0.007)ES(0.993)EEDEDLEVPVPSR;GDS(0.002)ES(0.998)EEDEDLEVPVPSR 161.14 8.1247e-23 5538100.0 1582.06 1997.54 1382.61 1410.48 1701.81 1860.29 1447.45 1414.58 1774.79 1683.23 1770.73 True False 1742.6695665489844 2165.879706167241 1476.4422289093395 1497.6021461675016 1582.280736525781 1845.1404150171836 1502.5335018250323 1386.3650921834585 1700.2017482984768 1576.9505705381707 1552.9414355823042 1.122173397283033 1.3946950326269736 0.950739155437449 0.9643648574589987 1.018892728515854 1.1881584023323546 0.9675403511025704 0.8927349482845213 1.0948267006997303 1.0154604252328832 1.0 10.60078770859972 -5.770525650429898 24.999998804543072 1.028097717001903 1.258434236462919 0.4940034784155911 0.09547808871315314 105.18003711695144 289395.8767539903 0.012740195127998292 0.04043527907972864 1.6961894184575006e-06 5.770525650429898 0.23033651946101608 GDSGS(ph)TPMPR ddPTM_A549_PD325901_60min_R1 1 GDSGSTPMPR 10 0 Q7L4E1;Q7L4E1-3;Q7L4E1-2 Q7L4E1 FAM73B Protein FAM73B 1 GDS(0.075)GS(0.462)T(0.462)PMPR 44.318000000000005 0.020572999999999998 4707400.0 441.07 319.13 511.05 339.75 462.03 369.66 603.3 428.1 603.52 507.44 458.67 True False 485.8471017014276 346.02420508683247 545.7329261933002 360.735585871766 429.5786067169697 366.6496115203825 626.2589116384275 419.5612096620469 578.1561531973344 475.400151799748 402.25649774868856 1.20780423540843 0.8602078699124273 1.3566789579474963 0.8967800094981612 1.067922107215657 0.9114821353350727 1.5568646252911131 1.0430190985359036 1.437282322182748 1.1818333686601037 1.0 8.65197191512145 GDSIEEILADS(ph)EDEEDNEEEER ddPTM_A549_MK2206_60min_R1 1 GDSIEEILADSEDEEDNEEEER 22 0 Q5JTH9-2;Q5JTH9-3;Q5JTH9 Q5JTH9-2 RRP12 RRP12-like protein 1 GDSIEEILADS(1)EDEEDNEEEER 116.65 1.8067999999999997e-15 4634500.0 327.88 433.69 521.75 616.66 730.54 574.03 421.71 497.32 1016.7 739.02 809.48 True False 383.2181281036378 455.7629685602377 595.7419954959516 767.741727682919 623.0785337404865 634.7734735897247 498.32924829734293 567.8166329786245 786.4190733362797 572.0748687283192 608.4637754885387 0.629812559993321 0.7490387873859924 0.9790919681580508 1.2617706404403373 1.024019109831499 1.043239547136659 0.8189957535224375 0.9331971036775717 1.2924665444625028 0.9401954426440545 1.0 9.249027565320674 -5.769504873986008 2.743127626080656 1.0958229018587968 0.6538663287205582 0.44833649654006913 0.1394899792252865 0.16740431068729383 2.4747789348458906 0.022203296504848178 0.10315720545925003 1.7001808728005998e-06 5.769504873986008 -0.44195657313823866 GDSIEEILADS(ph)EDEEDNEEEER ddPTM_A549_PD325901_60min_R1 3 GDSIEEILADSEDEEDNEEEER 22 0 Q5JTH9-2;Q5JTH9-3;Q5JTH9 Q5JTH9-2 RRP12 RRP12-like protein 1 GDSIEEILADS(1)EDEEDNEEEER;GDSIEEILADS(1)EDEEDNEEEER;GDSIEEILADS(1)EDEEDNEEEER 209.45 1.5924e-73 85184000.0 520.89 648.3800000000001 615.78 449.83 689.27 470.11 898.8 769.48 508.96 565.79 588.71 True False 573.7703693410493 703.0212580898079 657.5705337859505 477.614977461947 640.8580530524112 466.2815800244739 933.0043258422317 754.132117754618 487.57018115607633 530.0659228416747 516.3024021401674 1.1113067980367064 1.3616463049090164 1.2736150966181854 0.9250682845598742 1.2412455382658263 0.9031172004849327 1.8070888726737644 1.4606403430017043 0.9443500149040741 1.0266578668711497 1.0 9.012072500149118 -8.785931393741988 24.869552386011666 0.9737207833101794 1.2587655745870294 0.20437843480119955 0.23673214451601585 230.92403540090984 234482.53079361407 0.041126555544749206 0.04379266437032202 1.6370751126177047e-09 8.785931393741988 0.28504479127685 GDSIEEILADS(ph)EDEEDNEEEERS(ph)R ddPTM_A549_PD325901_60min_R1 1 GDSIEEILADSEDEEDNEEEERSR 24 1 Q5JTH9-2;Q5JTH9-3;Q5JTH9 Q5JTH9-2 RRP12 RRP12-like protein 2 GDSIEEILADS(1)EDEEDNEEEERS(1)R 41.431999999999995 0.023116 1054000.0 160.64 311.08 185.05 432.39 161.64 259.43 284.73 272.33 269.54 242.82 171.76 True False 176.94805454308224 337.2958033353547 197.60860579604767 459.09774827106116 150.28696402772763 257.3172880937424 295.5655559602345 266.89816451124807 258.21217115059886 227.48830376007956 150.6346088763485 1.1746839312892143 2.239165394004713 1.3118406670956921 3.0477574290243017 0.9976921316341968 1.7082215701503667 1.9621357811793143 1.771824990964307 1.7141623234973684 1.5101994518857085 1.0 7.234909462560323 -10.498330796631462 0.5611593282100403 0.9088180952999791 1.8102463274187477 0.08740946080462009 0.5480891248727986 1.189676735978031 0.5860896258285733 0.5417809122282498 0.11075980811845224 3.174455207048758e-11 10.498330796631462 0.9014282321187685 GDSLS(ph)R ddPTM_A549_MK2206_60min_R1 1 GDSLSR 6 0 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 GDS(0.197)LS(0.803)R 92.18700000000001 0.03682 65209000.0 2477.7 2291.3 1840.7 1550.0 1625.1 872.86 834.12 1242.0 1480.5 3263.9 3001.6 True False 2895.8751860509437 2407.9173830664126 2101.7389383984637 1929.7500695821445 1386.0499427569523 965.2254658424248 985.6688069758364 1418.0573034654785 1145.1691138726876 2526.582723123001 2256.2198800543533 1.2835075214305711 1.0672352479264586 0.9315310785878865 0.8553023074753051 0.6143239650576795 0.42780647151250706 0.4368673530844393 0.6285102422868984 0.5075609536093175 1.119830006578142 1.0 11.13969195718876 -5.833259428728 1.2687821142910047 0.694925057581377 1.2863933560555607 0.46274406010676694 0.20815960700239305 0.4942097463618163 1.2104681633450358 0.03419708749680136 0.28963592840719476 1.4680490666881227e-06 5.833259428728 0.5914682984741837 GDSRS(ph)PSHKR ddPTM_A549_MK2206_60min_R1 1 GDSRSPSHKR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GDS(0.308)RS(0.676)PS(0.016)HKR 43.99100000000001 0.012623 2921100.0 556.1 336.74 286.68 189.67 253.78 216.66 208.4 199.49 343.92 531.84 552.04 True False 649.9560846603426 353.87862766716887 327.335534774853 236.13915851460987 216.4492981803331 239.58681739273158 246.2635824267063 227.76831841250257 266.02266912738594 411.69697462107825 414.9532324710839 1.5663357549712182 0.8528156909630268 0.7888492224184889 0.5690741510998237 0.521623357146438 0.5773826991682183 0.5934731028848347 0.548901178709036 0.6410907261601434 0.9921527112088889 1.0 8.696804935670208 -5.225265293528839 2.6387697326642576 0.7361565006981861 1.7798989037502457 0.6910181447028498 0.16561264088167735 0.30224157597335266 2.505510826986169 0.028096933459431706 0.7187160567361959 5.952983879145194e-06 5.225265293528839 1.0437424030520597 GDSRS(ph)PSHKR ddPTM_A549_PD325901_60min_R1 2 GDSRSPSHKR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GDS(0.338)RS(0.645)PS(0.016)HKR;GDS(0.12)RS(0.876)PS(0.004)HKR 53.251999999999995 0.0044271 9060600.0 2633.89 2208.89 1876.1599999999999 1647.9099999999999 1949.82 1630.84 1029.01 1449.79 1316.15 2239.61 3362.2 True False 2901.280573832662 2395.0409124001303 2003.4874998665903 1749.6976580248481 1812.8713697138326 1617.558979743279 1068.1695386458775 1420.8728011117478 1260.8367925349148 2098.200642385765 2948.670714741841 0.9839283034649299 0.8122442768621652 0.6794544707383502 0.5933852326328801 0.6148097041322402 0.548572267380116 0.36225460283021016 0.4818689296190696 0.4275949790634056 0.711575094464037 1.0 11.525849006779115 -3.5308974602794794 17.66387791431667 0.6767478322525046 49.075195612112935 0.0 0.20104429835050797 0.0 0.0 0.03371872511965934 0.0 0.0002945116912761445 3.5308974602794794 48.39844777986043 GDSVIVVLR ddPTM_A549_MK2206_60min_R1 1 GDSVIVVLR 9 0 P62316;K7EJB5;P62316-2 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 0 54.157 0.056373 1240300.0 536.13 680.37 616.46 580.8 1003.6 801.52 849.67 678.5 1177.1 775.57 715.32 False True 626.6156368799661 714.9979269047687 703.883297639549 723.0960260731031 855.9717694608812 886.3363143940845 1004.0440406933759 774.6794528191039 910.488729442446 600.3681983432416 537.6863021723351 1.1653925985250932 1.3297677921421236 1.3090965769366871 1.3448288028757367 1.5919538325648692 1.6484264352897775 1.8673416760607142 1.4407647166931352 1.6933455915911042 1.116577074620763 1.0 9.070620908478004 -10.915957808936431 1.164147630794022 0.9994016357554111 1.5079248026131367 0.4125788855503255 0.19543619235549017 0.3656257524340833 0.8784659570920458 0.14915889881460742 0.035156116375561625 1.213506735114808e-11 10.915957808936431 0.5085231668577256 GDSVIVVLR ddPTM_A549_PD325901_60min_R1 2 GDSVIVVLR 9 0 P62316;K7EJB5;P62316-2 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 0 ; 83.265 0.0040082 3219000.0 1949.83 1865.29 1585.35 2050.38 2200.4 2136.3999999999996 1920.4499999999998 1999.5 2057.1 1932.12 2248.6000000000004 False True 2147.77530621102 2022.4845345358244 1692.9413844839996 2177.0273158491605 2045.851494967902 2119.001866721163 1993.5337756605622 1959.618403922594 1970.647240757948 1810.1256134623368 1972.03645504982 1.0891154170660402 1.0255817174965611 0.8584736758536395 1.1039488191379108 1.0374308698650387 1.0745246931389156 1.0109010766792337 0.9937029302397393 0.999295543300777 0.917896628547167 1.0 10.945470506273178 -7.992866768032178 24.81187047105812 0.9993579157688546 1.0282535982976815 0.09600868035143384 0.06547717251450924 442.4050892685622 1538826.8679127677 0.00924660319431091 0.012760553918801473 1.016560503380137e-08 7.992866768032178 0.028895682528826905 GDSVS(ph)DSGSDALR ddPTM_A549_MK2206_60min_R1 1 GDSVSDSGSDALR 13 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 GDS(0.411)VS(0.552)DS(0.012)GS(0.025)DALR 120.53 1.0410999999999999e-05 4974900.0 621.81 468.19 607.85 1036.0 1296.1 1029.7 820.11 1150.9 1464.6 1435.8 1404.3 True False 726.7563262050846 492.01887119882315 694.0522701719493 1289.820046507808 1105.4454069332874 1138.6621705404582 969.1133713242137 1314.0435994834288 1132.8704384856053 1111.451782793592 1055.5735532916874 0.6884942540846887 0.4661151936447419 0.6575119924212058 1.22191394667444 1.047246213668465 1.0787141900151518 0.9180917505010833 1.2448621845306105 1.0732273795159761 1.0529363674635979 1.0 10.043811395106493 -6.148670841565546 5.429238742814517 1.0556252807278679 0.5755483632664091 0.813078643171332 0.10133356298850839 0.06609412612212148 2.7321820473112526 0.013371311819992635 0.036332405326531675 7.101157716682617e-07 6.148670841565546 -0.48007691746145875 GDSVS(ph)DSGSDALR ddPTM_A549_PD325901_60min_R1 1 GDSVSDSGSDALR 13 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 GDS(0.152)VS(0.824)DS(0.021)GS(0.003)DALR 158.04 1.9227e-18 5807700.0 1471.5 1159.8 1168.4 1344.5 1437.4 1226.6 1365.9 1704.1 1262.5 1308.3 1387.0 True False 1620.8855967389545 1257.540416318454 1247.6946501599675 1427.5467114189537 1336.4419827608 1216.6109762779336 1417.8800719491599 1670.110388659411 1209.4415154620133 1225.6937147241256 1216.4077929174157 1.3325182608798032 1.0338148305531538 1.0257206977994722 1.1735757693521063 1.0986792344987335 1.0001670355629921 1.165628895346466 1.3729856043209336 0.9942730739674936 1.007633888783661 1.0 10.248411248799878 -8.90497976382439 20.48567970400515 0.9972126222124053 1.1398200204282531 0.2567826827147033 0.11236812862734842 4.24288837299984 908.480958669405 0.01902338376932039 0.02025165454539973 1.2445726019232935e-09 8.90497976382439 0.1426073982158479 GDT(ph)DRLTPEALK ddPTM_A549_MK2206_60min_R1 1 GDTDRLTPEALK 12 1 H0YMP5;H0YL85;A0A0A6YYH1;Q7Z6K5;Q7Z6K5-2 H0YMP5 ARPIN;C15orf38-AP3S2 Arpin 1 GDT(0.861)DRLT(0.139)PEALK 43.813 0.026771 2784300.0 520.26 432.24 385.68 379.73 767.14 711.92 366.43 287.81 904.14 939.66 790.22 True False 608.0671688642144 454.2391697536886 440.37522342669615 472.7638670467277 654.2947222242129 787.2549018657506 433.0055878532531 328.60794888115856 699.3537336148952 727.3901533777872 593.986565037497 1.0237052564073204 0.7647297034824576 0.7413891985905375 0.7959167679438729 1.1015311805628276 1.3253749296771604 0.7289821240753457 0.5532245478656815 1.1773898178500832 1.2245902452892494 1.0 9.21428648986983 -7.478271715791798 0.4064526962768595 1.0678143105937237 0.826420763289783 0.07986935730961142 0.22528655548412155 2.5802096366950504 0.8293485478786146 0.08387370619992746 0.23890804025292633 3.3245149036033234e-08 7.478271715791798 -0.2413935473039407 GDTDRLT(ph)PEALK ddPTM_A549_MK2206_60min_R1 1 GDTDRLTPEALK 12 1 H0YMP5;H0YL85;A0A0A6YYH1;Q7Z6K5;Q7Z6K5-2 H0YMP5 ARPIN;C15orf38-AP3S2 Arpin 1 GDT(0.086)DRLT(0.914)PEALK 56.147 0.006721600000000001 2807700.0 519.59 599.42 634.38 540.49 1017.9 427.76 708.64 657.78 933.28 1053.5 836.11 True False 607.2840892441421 629.9279176701735 724.3446231005697 672.910074263518 868.1682584039762 473.02527927589284 837.3907152152644 751.0223293667651 721.8935701419131 815.5136183124732 628.4808115379282 0.9662730796157222 1.0023025462443385 1.1525325989317914 1.0706931093359382 1.3813759186688919 0.7526487214754786 1.332404585537181 1.1949805237951034 1.1486326342651554 1.2975950949351425 1.0 9.295724887448873 -5.6257464195861555 5.7444258711212575 1.100894879905431 0.9751190243553622 0.07141537057121883 0.16983822740764598 0.377111482275126 17.48599346630962 0.0204966448118629 0.08277506138570105 2.3673015388581948e-06 5.6257464195861555 -0.12577585555006876 GDTGGEDTAAPGR ddPTM_A549_PD325901_60min_R1 1 GDTGGEDTAAPGR 13 0 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 0 67.726 0.011703 1998700.0 594.83 566.96 592.54 587.06 833.63 998.48 681.39 682.32 677.93 942.61 656.02 False True 655.2167037092979 614.7397089462931 632.7533276324779 623.3213628900041 775.0787046673755 990.3487099249891 707.3206693209154 668.7105923303153 649.4389596650791 883.0934437331713 575.3336988534124 1.1388463860453246 1.0684924421625455 1.0998023041123743 1.0834084013021081 1.3471811336830029 1.721346606149898 1.2294094205337545 1.1623004069864054 1.1288039636116425 1.534923898066628 1.0 9.16825516502878 -9.178849958127099 1.1602367431809144 1.03596117301208 1.2378786618982753 0.0 0.2301690414839695 0.549658720694679 1.5367758527420028 0.0452182192327892 0.03979969718642507 6.624453285528445e-10 9.178849958127099 0.20191748888619543 GDTGGEDTAAPGRFS(ph)FSPEPTLEDIRR ddPTM_A549_MK2206_60min_R1 2 GDTGGEDTAAPGRFSFSPEPTLEDIRR 27 2 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 GDTGGEDT(0.016)AAPGRFS(0.948)FS(0.036)PEPTLEDIRR;GDTGGEDT(0.051)AAPGRFS(0.77)FS(0.177)PEPT(0.002)LEDIRR 74.36399999999999 1.6047e-06 6297600.0 666.5699999999999 857.8 699.8 739.69 753.46 696.32 539.77 408.88 946.21 856.4300000000001 955.76 True False 779.0707199281504 901.4583560399642 799.0421628137364 920.9140832059456 642.6270321024265 770.0041202201929 637.8392221039505 466.8399921424836 731.8949457868805 662.9618681835325 718.4184143659215 1.0844247646627498 1.2547818068327137 1.1122239447592301 1.2818631382364376 0.8945024504551589 1.0718045428996987 0.887838075067869 0.6498162948043559 1.0187586107920874 0.9228074544395759 1.0 9.488680519216148 -6.765148445146394 24.999787203466962 0.970365343535149 1.1833490556747452 0.49607591537215134 0.12088384576791698 73.54789250580247 495731.2030556633 0.01788014862359172 0.03474056031869221 1.7173212933892913e-07 6.765148445146394 0.21298371213959622 GDTGGEDTAAPGRFS(ph)FSPEPTLEDIRR ddPTM_A549_PD325901_60min_R1 2 GDTGGEDTAAPGRFSFSPEPTLEDIRR 27 2 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 GDTGGEDTAAPGRFS(0.977)FS(0.022)PEPTLEDIRR;GDTGGEDT(0.001)AAPGRFS(0.986)FS(0.013)PEPTLEDIRR 97.243 5.1976e-10 9704900.0 1965.76 2249.98 1592.29 2243.2 2399.0 2094.6000000000004 2143.5 2161.5 1895.74 2318.5 2044.0099999999998 True False 2165.322508083973 2439.593710905496 1700.352374617609 2381.7573693231648 2230.5025161007084 2077.5422720624165 2225.072065468206 2118.3871868360543 1816.0686404134321 2172.1095143223138 1792.6097280469558 1.2079162989052206 1.36091736686235 0.9485346129802269 1.3286536004231573 1.244276699608696 1.1589484535074426 1.2412473449490966 1.181733622043897 1.0130864582510297 1.211702402557428 1.0 10.807845715591547 -8.7307696368522 4.0838932937980115 1.0052585519867816 1.2119711855484359 0.14308214905250594 0.11780651896399102 0.1277134139963497 4.615224459408705 0.016039291906009116 0.017757447220646087 1.8587901531015077e-09 8.7307696368522 0.20671263356165426 GDTSGDYKK ddPTM_A549_PD325901_60min_R1 2 GDTSGDYKK 9 1 P08758;D6RBL5;D6RBE9 P08758 ANXA5 Annexin A5;Annexin 0 ; 66.29899999999999 0.0054867 11337700.0 8096.099999999999 8434.1 8007.6 8074.8 9161.0 8135.4 6962.2 7205.200000000001 8839.5 8974.099999999999 10462.7 False True 8918.010111966187 9144.87120647653 8551.043889610546 8573.562056798635 8517.562963734297 8069.1479996832695 7227.1503308620195 7061.486633629944 8468.006555189282 8407.47379447051 9175.854228519862 0.9718997152600508 0.996623418237505 0.9319071202147788 0.934361187882735 0.9282583126986148 0.8793892970316821 0.7876269773771042 0.7695726695049097 0.9228575720906192 0.9162606101935321 1.0 13.16362675693758 -4.231173524554906 15.828083014713371 0.9329131084528619 0.918256059101841 0.0 0.07455063132960363 0.0 0.0 0.011278299095350533 0.0 5.872546650785581e-05 4.231173524554906 -0.014657049351020857 GDTSHS(ph)PTPGK ddPTM_A549_MK2206_60min_R1 2 GDTSHSPTPGK 11 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 GDT(0.015)S(0.094)HS(0.853)PT(0.039)PGK;GDTS(0.003)HS(0.976)PT(0.021)PGK 116.24 1.9567e-05 12301300.0 2416.0 3182.0 2483.0 2036.17 3515.2 3059.3 2653.3999999999996 2624.9 3889.9 4079.5 4467.299999999999 True False 2823.7617344711143 3343.950208579114 2835.1267365911804 2535.031741407144 2998.118736557283 3383.0330954010146 3135.4884338340803 2996.987613419109 3008.843860893865 3157.9381166641997 3357.94611879225 0.8409193103690223 0.995832002742745 0.8443038203397046 0.7549352049516854 0.8928430148949542 1.0074709288717794 0.9337518598904199 0.8925061651963114 0.8960369685669803 0.9404373998115291 1.0 11.713363365808123 -7.010100865880942 24.6475305837678 0.9471284879316734 0.8622428217690793 0.2978703907708675 0.062078943222589625 443.6961611978669 1082685.7757318302 0.009991834290845991 0.018108377123993612 9.77010281743749e-08 7.010100865880942 -0.08488566616259408 GDTSHS(ph)PTPGK ddPTM_A549_PD325901_60min_R1 2 GDTSHSPTPGK 11 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 GDT(0.002)S(0.016)HS(0.971)PT(0.011)PGK;GDTS(0.001)HS(0.908)PT(0.092)PGK 133.05 6.947499999999999e-08 10297300.0 3059.0 3661.6 3697.0 3871.2 4757.6 3769.7 3433.3 4043.2 4121.9 4714.7 5344.6 True False 3369.5474280832227 3970.1758823863197 3947.9006518670008 4110.315231866906 4423.442588828983 3739.0008130400506 3563.9561102738485 3962.5552041709593 3948.6708772933653 4417.013037384266 4687.248082210828 0.7188754187924085 0.847016375654201 0.8422640710761995 0.8769143770022515 0.9437184700372385 0.7976963769488559 0.7603515000197817 0.84539054359204 0.8424283946649781 0.9423467586765536 1.0 12.194525439091494 -10.499613662815493 0.6690320787064344 1.0095643888126862 0.831631274708527 0.45656470300279806 0.05806303940246892 0.5134951125024219 0.383839164562913 0.05034069684763774 0.011904743152665237 3.165091992513837e-11 10.499613662815493 -0.17793311410415913 GDTSQAADDS(ph)ASTTGSR ddPTM_A549_PD325901_60min_R1 1 GDTSQAADDSASTTGSR 17 0 Q9Y2K1-2;Q9Y2K1 Q9Y2K1-2 ZBTB1 Zinc finger and BTB domain-containing protein 1 1 GDTSQAADDS(0.429)AS(0.429)T(0.047)T(0.047)GS(0.047)R 44.196000000000005 0.054421000000000004 520420.0 0.0 0.0 223.58 0.0 257.25 233.42 107.72 0.0 252.07 0.0 0.0 True False 0.0 0.0 238.7534832957597 0.0 239.18164746432157 231.5191049101544 111.81934354664578 0.0 241.47637449703745 0.0 0.0 0.0 GDTVS(ph)ASPCSAPLAR ddPTM_A549_PD325901_60min_R1 1 GDTVSASPCSAPLAR 15 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 GDT(0.019)VS(0.488)AS(0.488)PCS(0.004)APLAR 208.79 2.5813000000000003e-45 32592000.0 8051.3 8981.8 8992.9 9768.3 11023.0 8608.3 8886.5 9668.0 8142.5 9205.1 10391.0 True False 8868.662048946204 9738.727807629843 9603.21227270077 10371.665705581081 10248.782507285581 8538.196858872772 9224.680620379386 9475.164155600718 7800.299041306494 8623.88841504781 9112.972873976107 0.9731908754246837 1.0686663882694858 1.053795770656208 1.138120989605864 1.124636564710184 0.9369277157902313 1.0122581014942207 1.039744580241089 0.8559554767886765 0.9463309651315901 1.0 13.153706057776823 -7.842790849522394 1.1952223526999486 0.9371510669719778 1.067866983197265 0.3290356802286143 0.06545605375113744 0.36631766344701094 1.0570488444502584 0.013530597395515365 0.02136580792264381 1.4361809125662594e-08 7.842790849522394 0.1307159162252871 GDTVSAS(ph)PCSAPLAR ddPTM_A549_MK2206_60min_R1 2 GDTVSASPCSAPLAR 15 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 GDT(0.001)VS(0.016)AS(0.959)PCS(0.024)APLAR;GDTVS(0.001)AS(0.974)PCS(0.026)APLAR 187.16 1.9595e-33 44151000.0 5267.4 6058.700000000001 4822.6 5625.3 7552.5 6224.8 4956.5 6040.299999999999 8697.0 8205.7 8901.0 True False 6156.408344434249 6367.061951199964 5506.517196892726 7003.498752529313 6441.537254736254 6883.504204312177 5857.031892024807 6896.531022642938 6727.143386255164 6352.026670893842 6690.636044897326 0.9201529276322673 0.9516377678406017 0.8230184933003972 1.0467612803226076 0.9627690419132797 1.0288265806300947 0.8754073383638503 1.0307736030422159 1.0054564829282082 0.9493905554372923 1.0 12.70792765176217 -6.27334302509365 24.99638387665594 0.9969572636429214 0.9036065285741621 0.3405872759745132 0.053937814435137066 504.0937603246861 1058542.3703500233 0.00666368164095786 0.015597649537944189 5.329138101891135e-07 6.27334302509365 -0.09335073506875924 GDTVSAS(ph)PCSAPLAR ddPTM_A549_PD325901_60min_R1 1 GDTVSASPCSAPLAR 15 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 GDT(0.102)VS(0.396)AS(0.487)PCS(0.015)APLAR 212.03 1.9075999999999998e-45 33070000.0 8154.2 9000.5 8392.7 9050.7 8747.9 8278.6 8666.3 8133.9 8737.5 8163.3 9519.2 True False 8982.008381195226 9759.0037222575 8962.279091404971 9609.741183368933 8133.477682616671 8211.181826361084 8996.100788881326 7971.662983578889 8370.293260474728 7647.867844842504 8348.398747180583 1.0758959476185328 1.168967129840714 1.0735327052306536 1.151087948046843 0.9742560135095972 0.9835636838901783 1.0775839848233753 0.9548732906739841 1.0026226003281813 0.9160879920146768 1.0 13.027283794700008 -6.7634455444727735 24.999930269350365 1.000654971672954 1.1179250803854872 0.6400045485696271 0.04632017010539758 20.698904216600802 257945.10066078976 0.004947588682360716 0.009694573581006538 1.7240682557814058e-07 6.7634455444727735 0.11727010871253318 GDVEEDET(ph)IPDSEQDIRPR ddPTM_A549_MK2206_60min_R1 2 GDVEEDETIPDSEQDIRPR 19 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 1 GDVEEDET(1)IPDSEQDIRPR;GDVEEDET(1)IPDSEQDIRPR 98.816 2.9572e-07 4299800.0 568.87 569.1099999999999 718.6700000000001 520.21 1050.99 489.82000000000005 508.93 685.0 1134.63 773.6 1071.6100000000001 True False 664.8813484638174 598.0752681346512 820.5882125598002 647.661473353114 896.3907632380342 541.6524272837986 601.3959933033767 782.1008477245186 877.6381166317917 598.8432227114665 805.4996620685794 0.825427222100076 0.7424897815583835 1.018731914117099 0.804049342106332 1.1128381617641405 0.6724427740823594 0.7466123471224678 0.9709511804338056 1.0895573989167864 0.743443170632245 1.0 9.653740173452581 -8.488658560574107 6.54145773182412 1.0418475711410868 0.8508481355807663 0.0 0.1499095771159677 0.1655273537230863 22.362495084253734 0.01943439342809281 0.02320762060715522 3.245947112573098e-09 8.488658560574107 -0.1909994355603205 GDVEEDET(ph)IPDSEQDIRPR ddPTM_A549_PD325901_60min_R1 4 GDVEEDETIPDSEQDIRPR 19 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 1 GDVEEDET(0.999)IPDS(0.001)EQDIRPR;GDVEEDET(0.997)IPDS(0.003)EQDIRPR;GDVEEDET(1)IPDSEQDIRPR;GDVEEDET(0.998)IPDS(0.002)EQDIRPR 122.77 9.608100000000001e-15 6677520.0 1146.3600000000001 891.27 953.38 1113.15 1229.3999999999999 964.4200000000001 988.74 942.36 1193.25 935.55 1038.23 True False 1262.737623294372 966.3804508123364 1018.0820999396702 1181.9067473529262 1143.0511851997542 956.5660832724317 1026.367041759289 923.5638905328811 1143.101852138651 876.4792133380386 910.5342918822269 1.3868095189299043 1.0613333945003502 1.1181150551014658 1.2980365021834894 1.2553631372157066 1.0505547037608538 1.1272140444459444 1.0143098384836444 1.255418782499304 0.9625987962805983 1.0 9.830569541734462 -7.255194146645176 24.633329266944255 1.1107353694134032 1.2131365420379925 0.28141332016629417 0.11263693738383138 661.5951962277388 2609554.2418653257 0.01785872373755402 0.030447937314435767 5.5565580183085154e-08 7.255194146645176 0.10240117262458925 GDVEEDETIPDS(ph)EQDIRPR ddPTM_A549_MK2206_60min_R1 1 GDVEEDETIPDSEQDIRPR 19 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 1 GDVEEDET(0.042)IPDS(0.958)EQDIRPR 49.559 0.0047664 627270.0 0.0 0.0 0.0 0.0 129.71 127.51 0.0 88.04299999999999 0.0 139.17 139.47 True False 0.0 0.0 0.0 0.0 110.62983082579801 141.00302356571225 0.0 100.52336487037928 0.0 107.73140034223722 104.83574982382086 0.0 0.0 0.0 0.0 1.0552681791441778 1.3449898894477448 0.0 0.9588653206497912 0.0 1.02762083090246 1.0 6.711986961026141 -6.726211579434917 23.912082543267434 0.6034850636171988 9.46878350501609e-07 0.40316770863053764 0.4205771316208339 120.50266972070388 81794.30894654042 0.06764396225616205 0.1408060000374417 1.8784014748749972e-07 6.726211579434917 -0.6034841167388483 GDVEEDETIPDS(ph)EQDIRPR ddPTM_A549_PD325901_60min_R1 4 GDVEEDETIPDSEQDIRPR 19 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 1 GDVEEDETIPDS(1)EQDIRPR;GDVEEDET(0.059)IPDS(0.941)EQDIRPR;GDVEEDET(0.005)IPDS(0.995)EQDIRPR;GDVEEDET(0.001)IPDS(0.999)EQDIRPR 89.66799999999999 1.5512999999999999e-06 5537100.0 804.95 800.95 782.88 609.62 786.24 930.27 410.712 400.02 773.6099999999999 752.5799999999999 905.9000000000001 True False 886.6679314271297 868.4488674342698 836.0109446398801 647.274842852527 731.0172147807502 922.6941895500353 426.3418699102299 392.0412872903809 741.0978620012423 705.061970363894 794.4800429732423 1.1160354992793597 1.093103439306302 1.052274317063036 0.8147150436028344 0.9201202991141346 1.1613812048657226 0.5366300559479111 0.49345643198690725 0.9328086571284738 0.8874508259833535 1.0 9.633867169870669 GDVEEDETIPDSEQDIRPR ddPTM_A549_PD325901_60min_R1 2 GDVEEDETIPDSEQDIRPR 19 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 0 ; 129.32 1.8956e-16 3748400.0 1287.3200000000002 1421.9 1347.35 1038.45 1668.27 1322.02 1258.22 1279.08 1251.02 1561.38 1459.6599999999999 False True 1418.0077787251034 1541.7285031584834 1438.7892732737353 1102.5926980089341 1551.0964704190621 1311.2539074343335 1306.1022506244026 1253.5677459811511 1198.4439799392378 1462.794200333222 1280.1310735471047 1.1077051467831003 1.2043520659853373 1.12393902703026 0.861312345894213 1.211670041038174 1.024312224373236 1.0202879045856879 0.9792495252127975 0.93618849249435 1.142690956075285 1.0 10.32207582103976 -6.235340353725585 0.4565221019120284 0.9695481051725044 1.2040326249801498 0.0883639230194172 0.10162210275527428 1.9035788469152908 0.45233273831842036 0.020027233608138018 0.20602096271102968 5.816472060223675e-07 6.235340353725585 0.2344845198076454 GDVEGSQS(ph)QDEGEGSGESER ddPTM_A549_MK2206_60min_R1 2 GDVEGSQSQDEGEGSGESER 20 0 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 GDVEGSQS(1)QDEGEGSGESER;GDVEGS(0.013)QS(0.987)QDEGEGSGESER 398.18 0.0 45018000.0 2737.1 3314.1099999999997 3359.6699999999996 2272.3 3939.5 2575.6 2941.53 2535.49 3560.0 3617.98 3035.4 True False 3199.0555643298394 3482.784043291681 3836.1217249791735 2829.0136020074224 3360.0047686240937 2848.1482824550885 3475.9679252189503 2894.9034721124676 2753.66568415182 2800.6758052037635 2281.6264072218096 1.4020943806594195 1.5264479900249945 1.681310188572972 1.239910965727352 1.472635817147364 1.2482973870919982 1.5234605955720042 1.2687894314991761 1.2068871903988798 1.2274909671184806 1.0 11.15584686920181 -8.958222444281644 0.31180010284378135 0.9498046457902833 1.5360228344245959 0.46209534426374266 0.1355137068797114 0.5469552664466726 0.16008046250620575 0.11476351106860024 0.08784336105847629 1.1009752490035894e-09 8.958222444281644 0.5862181886343125 GDVEGSQS(ph)QDEGEGSGESER ddPTM_A549_PD325901_60min_R1 1 GDVEGSQSQDEGEGSGESER 20 0 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 GDVEGSQS(1)QDEGEGSGESER 274.27 3.419999999999999e-112 30485000.0 836.88 829.27 715.83 1029.3 887.16 797.33 869.78 1130.5 875.98 989.15 888.26 True False 921.8394415215063 899.155493223318 764.4105284354761 1092.8775232900919 824.8489421358499 790.8368088339193 902.879953861878 1107.9512906399073 839.1656069025067 926.694900190605 779.0096511440685 1.1833479086782497 1.1542289519812765 0.9812593814631797 1.4029062691137022 1.0588430334906134 1.0151822993110307 1.1590099718737645 1.422256180026459 1.0772210660934587 1.1895807694161982 1.0 9.605497391709212 -8.984547008722323 21.13439952625164 1.0340670895049002 1.1688126735018167 0.03508047249584034 0.14005531242596012 21.180501310554053 28970.059150792804 0.023130507162233034 0.023399789563491733 1.0362224360034226e-09 8.984547008722323 0.1347455839969165 GDVHSLLS(ph)NPPDPDEPSESTLDIPEGGSSSR ddPTM_A549_MK2206_60min_R1 1 GDVHSLLSNPPDPDEPSESTLDIPEGGSSSR 31 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GDVHS(0.001)LLS(0.999)NPPDPDEPSESTLDIPEGGSSSR 86.507 1.1996e-07 1706800.0 576.52 601.5 675.7 550.17 754.92 626.93 879.07 764.84 1324.5 524.87 918.56 True False 673.8224814392748 632.1137807857752 771.5244204247532 684.9616746980694 643.8722680364771 693.2713164775466 1038.7856401336114 873.2584122242647 1024.5028647918775 406.30150246195376 690.456201033691 0.9759090879776102 0.9155016347733999 1.117412544444809 0.992042179753914 0.9325316610561648 1.004077181781612 1.504491723846396 1.2647556947376215 1.4838057262112803 0.58845369460608 1.0 9.43140609005729 -7.607948652042643 14.091765833137577 1.2563747292917304 0.9880895367624073 0.06948443587854258 0.24317000389782045 0.8712437209248015 141.79284290795084 0.02932846591461783 0.043501429520960394 2.4663309218019385e-08 7.607948652042643 -0.26828519252932315 GDVMS(ph)TACGTPGYVAPEVLAQKPYSK ddPTM_A549_MK2206_60min_R1 1 GDVMSTACGTPGYVAPEVLAQKPYSK 26 1 A0A087WUR6;Q8IU85-2;Q8IU85 A0A087WUR6 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D 1 GDVMS(0.522)T(0.471)ACGT(0.006)PGYVAPEVLAQKPYSK 114.12 1.4334e-17 5673100.0 833.42 1555.6 992.08 994.93 1274.3 1174.3 965.59 1178.8 1894.6 1772.1 1507.8 True False 974.0809208372997 1634.7733954951834 1132.7718617951587 1238.6878946641052 1086.8521580550027 1298.5636465627465 1141.0252042005925 1345.8985099235947 1465.4761250545055 1371.7813792230984 1133.371646837005 0.859454110710947 1.4423983519064396 0.9994707957945478 1.0929229596673034 0.9589547798272278 1.1457527194956363 1.0067529105611093 1.187517363505348 1.2930234571725276 1.2103544173276641 1.0 10.146405301275195 -8.283352215604152 24.47184586875607 1.1459243540875557 1.0829468885881532 0.07805094823815872 0.15378839567064936 2037.9197110321488 2275904.851009922 0.026794170940799254 0.03240790574655346 5.207721902156468e-09 8.283352215604152 -0.06297746549940242 GDVMS(ph)TACGTPGYVAPEVLAQKPYSK ddPTM_A549_PD325901_60min_R1 1 GDVMSTACGTPGYVAPEVLAQKPYSK 26 1 A0A087WUR6;Q8IU85-2;Q8IU85 A0A087WUR6 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D 1 GDVMS(0.343)T(0.313)ACGT(0.313)PGY(0.03)VAPEVLAQKPYSK 75.23 1.9071000000000001e-06 6766500.0 3391.3 3537.3 3552.6 3374.1 3919.4 3799.4 4230.3 4437.2 3742.8 4539.8 5157.5 True False 3735.5822794568935 3835.4006851554277 3793.700799519257 3582.5104938629156 3644.1148651959625 3768.4589460870548 4391.286381408981 4348.696565083938 3585.503131937604 4253.1562532328835 4523.160196086211 0.8258788363695827 0.8479471252143831 0.8387279324755867 0.7920370578434922 0.8056568211643561 0.8331473533366821 0.9708447614145221 0.9614288189144324 0.7926986833320782 0.9403063497315537 1.0 12.143115377250123 -7.627781644411342 8.376294175433799 0.9096411237200784 0.8224457669933651 0.4877236882444679 0.05338595439951027 0.29624264134400163 21.537591374067013 0.011929748625456598 0.01770454397626934 2.3562336587631507e-08 7.627781644411342 -0.0871953567267133 GDVMST(ph)ACGTPGYVAPEVLAQKPYSK ddPTM_A549_PD325901_60min_R1 2 GDVMSTACGTPGYVAPEVLAQKPYSK 26 1 A0A087WUR6;Q8IU85-2;Q8IU85 A0A087WUR6 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D 1 GDVMS(0.146)T(0.854)ACGTPGYVAPEVLAQKPYSK;GDVMS(0.475)T(0.515)ACGT(0.008)PGY(0.001)VAPEVLAQKPYSK 126.88 3.2132e-19 19557700.0 3022.3999999999996 2972.4 4007.0 2926.5 3997.2 3459.3 3704.6000000000004 3656.8999999999996 3796.9 3538.1000000000004 3510.8 True False 3329.231823026718 3222.8945796387056 4278.9391160484365 3107.263258436273 3716.450461591393 3431.128607727261 3845.5805802349055 3583.9602607174456 3637.329497075422 3314.703762184076 3078.9938567948548 1.0812726422560497 1.046736281245344 1.3897199263991682 1.0091813764353679 1.2070340619192117 1.1143668247844343 1.2489731253436296 1.164003706213382 1.1813370426343683 1.0765541980114857 1.0 11.588243273584135 -10.696714491817064 0.881519728939862 0.9965912111538607 1.1625631690602654 0.1643373611421105 0.10108998094456063 0.6314154297109739 0.8443764779276194 0.06897589292973175 0.016678367360426268 2.010414038302114e-11 10.696714491817064 0.16597195790640462 GDVSNLDPNFSFEGTK ddPTM_A549_PD325901_60min_R1 2 GDVSNLDPNFSFEGTK 16 0 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 0 ; 132.59 1.0039e-09 4578200.0 3491.4 3366.8999999999996 3474.4 4156.3 4210.9 3784.1000000000004 3648.3 3862.6 4670.5 4515.1 4340.6 False True 3845.844357767166 3650.6404791365753 3710.1936772644567 4413.025211357829 3915.140910816368 3753.283544214355 3787.1380529263624 3785.557412848921 4474.215127101257 4230.015815448216 3806.7337173304495 1.010274067833708 0.9589954933061781 0.974639665594027 1.1592681650589824 1.0284777453680005 0.9859590459735184 0.9948523679723443 0.9944371458436607 1.1753422906183448 1.1111929884117562 1.0 11.894337940949768 GDVT(ph)AEEAAGASPAK ddPTM_A549_MK2206_60min_R1 2 GDVTAEEAAGASPAK 15 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVT(1)AEEAAGASPAK;GDVT(1)AEEAAGASPAK 159.13 1.4754000000000003e-19 33425000.0 5449.7 6318.700000000001 6169.0 6143.6 8289.9 6405.1 5701.200000000001 6208.9 9077.1 8648.1 9481.0 True False 6369.476127627169 6640.29484065018 7043.856962557794 7648.782275796687 7070.466691564128 7082.883430638723 6737.0342424718765 7089.030588958779 7021.151343150134 6694.4882036337 7126.60603771166 0.8937601003790573 0.9317611785346235 0.98838871200176 1.0732713770512698 0.9921225691653979 0.9938648766549504 0.94533557865016 0.994727441287754 0.9852026765611156 0.939365550475032 1.0 12.79899945834159 -5.638876440952876 3.1489128645599975 0.9950444725754742 0.90002197065994 0.46381897873116307 0.03290157729836287 0.13238007866405363 2.476457804207939 0.003925016963138415 0.020119532677447746 2.2968020073263215e-06 5.638876440952876 -0.09502250191553419 GDVT(ph)IDRR ddPTM_A549_MK2206_60min_R1 1 GDVTIDRR 8 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3;H0YG48 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 GDVT(1)IDRR 63.283 0.006153100000000001 10385000.0 643.99 1117.4 976.44 660.19 1506.1 1185.1 1018.6 826.76 1752.4 1757.6 1482.9 True False 752.6797679561478 1174.2708871987124 1114.9138746182416 821.9365796370555 1284.5546851186052 1310.5064953942876 1203.6664350280384 943.9557618463108 1355.484198007766 1360.5569392937864 1114.6550040420452 0.6752580531435504 1.0534837083586255 1.000232242779387 0.7373910103632852 1.1524235574778359 1.1757059275219965 1.0798555881983334 0.8468591254004763 1.216057159473028 1.22060811135287 1.0 10.122381536534313 -4.210241430227272 0.505004594063467 1.0869942204553389 9.241398254938168e-16 0.3309018564023609 0.1468024686337975 9.849245874283936 0.7669028117274385 0.02785943935076771 8.086982652433258 6.16252323546764e-05 4.210241430227272 -1.086994220455338 GDVT(ph)IDRR ddPTM_A549_PD325901_60min_R1 1 GDVTIDRR 8 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3;H0YG48 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 GDVT(1)IDRR 104.22 0.0012837 6931400.0 1096.0 1372.0 1433.3 1290.5 1044.3 1554.5 1229.7 1801.7 1592.0 1464.6 1757.0 True False 1207.2651131674445 1487.6232550344193 1530.5723571330723 1370.2112540618516 970.95197063942 1541.8406673928314 1276.4969064176605 1765.763680093694 1525.0937763291302 1372.1249060498 1540.9001385406623 0.783480436513431 0.9654248304781776 0.9932975660464466 0.8892278089867234 0.6301199839977806 1.0006103762525844 0.8284098849044107 1.1459299898343787 0.9897421242193528 0.8904697142472167 1.0 10.58955765248465 -8.23073910271803 24.99764329932412 1.006328726072671 0.875015120195181 0.24971276790364594 0.1135750092125628 709.6130751510501 577802.0368957851 0.016737398315230592 0.021606416591573745 5.878423858510747e-09 8.23073910271803 -0.13131360587748997 GDVTAEEAAGAS(ph)PAK ddPTM_A549_MK2206_60min_R1 4 GDVTAEEAAGASPAK 15 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK 241.29 1.2558999999999998e-64 599440000.0 40745.4 40059.200000000004 41279.4 35578.5 52243.9 44003.5 41759.3 42715.2 55188.2 54154.799999999996 53864.9 True False 47622.22739061231 42098.04217332262 47133.43963368589 44295.234097179564 44558.89151707585 48659.9211628407 49346.42426886543 48770.21040981365 42688.16081744593 41921.19306785797 40488.758734388226 1.1761839305329316 1.0397464256558595 1.1641117462475863 1.0940131404808513 1.1005250076790016 1.201813112672987 1.218768512825614 1.2045370600208536 1.054321301808388 1.0353785687248824 1.0 15.305233794478069 -8.930739257624419 4.860065300385534 1.0231473255438723 1.147149560100402 0.5164507405738098 0.05219842818798154 0.12378316993346122 5.303416518165095 0.009949447073243899 0.01042316923351223 1.1728993412742013e-09 8.930739257624419 0.1240022345565297 GDVTAEEAAGAS(ph)PAK ddPTM_A549_PD325901_60min_R1 3 GDVTAEEAAGASPAK 15 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK 213.55 1.5923e-45 672705000.0 85801.1 84873.0 81716.8 83261.4 98752.6 80854.8 87048.4 88834.9 93227.7 85731.6 97771.8 True False 94511.56450856844 92025.5455718193 87262.59345103732 88404.26757764076 91816.55805397543 80196.34531612344 90361.0744967124 87063.01822986908 89309.6639770597 80318.49214495359 85746.4884265054 1.102220816769374 1.0732281550013067 1.0176812491374665 1.0309957783683863 1.070790882972109 0.9352726483354584 1.0538166186731044 1.0153537459961652 1.0415547693665421 0.9366971594853797 1.0 16.387789969395815 -5.614103712454208 2.77051086675705 1.020259546701672 1.1003661226630028 0.3258321512027732 0.04153296834228491 0.20475283105892236 2.9305831351455542 0.004383240123467319 0.02590105185244133 2.431623251683752e-06 5.614103712454208 0.08010657596133086 GDVTAEEAAGAS(ph)PAKANGQENGHVK ddPTM_A549_MK2206_60min_R1 4 GDVTAEEAAGASPAKANGQENGHVK 25 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVTAEEAAGAS(1)PAKANGQENGHVK;GDVTAEEAAGAS(1)PAKANGQENGHVK;GDVTAEEAAGAS(1)PAKANGQENGHVK;GDVTAEEAAGAS(1)PAKANGQENGHVK 318.25 9.562099999999996e-210 473765000.0 23836.7 27048.5 28392.800000000003 27091.699999999997 36843.5 25907.8 26729.8 25435.399999999998 43525.0 42327.1 41009.0 True False 27859.752208637274 28425.153116515463 32419.3259793339 33729.16771619261 31423.869956289327 28649.34619979421 31586.258663864544 29040.945842645597 33666.656995142686 32765.378712552367 30825.333509178112 0.9037940238454242 0.9221361095104452 1.0517104695617059 1.0942028479967587 1.019417030700836 0.9294091235465137 1.0246850582966076 0.942112948558976 1.0921749471135027 1.0629367141411987 1.0 14.911828883242753 -8.761030260618318 24.9999999854665 1.0435270558408625 0.9901321191154953 0.18763419614664467 0.059835331932392495 17.91342438617432 1094625.315479111 0.011380478920776817 0.01252233094491185 1.7336831945770551e-09 8.761030260618318 -0.053394936725367215 GDVTAEEAAGAS(ph)PAKANGQENGHVK ddPTM_A549_PD325901_60min_R1 4 GDVTAEEAAGASPAKANGQENGHVK 25 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVTAEEAAGAS(1)PAKANGQENGHVK;GDVTAEEAAGAS(1)PAKANGQENGHVK;GDVTAEEAAGAS(1)PAKANGQENGHVK;GDVTAEEAAGAS(1)PAKANGQENGHVK 295.78 1.5404999999999996e-170 547617000.0 32677.5 30800.6 31032.8 31375.399999999998 36186.700000000004 42203.9 37346.799999999996 37673.6 41346.8 40365.1 41743.1 True False 35994.89574409592 33396.2746567151 33138.87242338605 33313.38719929657 33645.07102933786 41860.20543105842 38768.052910953105 36922.17049363255 39609.13778337011 37816.440697248945 36608.963331312894 0.9832263049445122 0.9122431125535349 0.9052119865694542 0.9099789824095482 0.9190391633013023 1.1434414313298502 1.0589770750977117 1.0085554775065635 1.081951909561205 1.03298310730649 1.0 15.159909300475453 -7.225634948218869 24.719836433473976 1.0453247702275248 0.9231406739240487 0.7009358178829477 0.041510106377361654 261.3749115736583 180456.5495927152 0.006756833211678686 0.01170281211102374 5.9479190849629104e-08 7.225634948218869 -0.12218409630347604 GDYPLEAVR ddPTM_A549_MK2206_60min_R1 4 GDYPLEAVR 9 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 164.96 8.6888e-06 42688200.0 10227.259999999998 11320.720000000001 9575.68 9594.650000000001 13467.75 10765.19 9792.0 10904.5 14670.68 14627.849999999999 14055.32 False True 11953.371455499604 11896.896293295338 10933.655412421038 11945.339680720206 11486.661815620551 11904.355260445216 11571.07965029898 12450.246268630674 11347.794404261915 11323.408525516954 10564.996136902171 1.1314127615956258 1.1260672639283806 1.0348944070344888 1.1306525365396654 1.087237673045532 1.1267732714889347 1.0952280057995183 1.1784430497937965 1.0740935687260245 1.0717853919478253 1.0 13.367004619300003 -9.774164810685063 0.918138799909068 1.0102097018813967 1.1103604946164056 0.3027887010962321 0.039962590591403675 0.25587233115870506 0.4472203014660351 0.012081408809282414 0.007107073164019567 1.68203562318494e-10 9.774164810685063 0.10015079273500893 GDYPLEAVR ddPTM_A549_PD325901_60min_R1 2 GDYPLEAVR 9 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 154.28 4.3202e-05 83088000.0 12184.3 12636.599999999999 13194.0 12055.9 14585.1 11292.7 13826.8 13175.3 13790.900000000001 12943.6 14549.8 False True 13421.241166392416 13701.53063015156 14089.424181967326 12800.565562064536 13560.692891863455 11200.735995282752 14352.986440315273 12912.508305677093 13211.316432146608 12126.338887031397 12760.266838781414 1.051799412658217 1.07376521222185 1.1041637577002932 1.0031581411103916 1.0627280027287016 0.8777822702924295 1.124818675162279 1.011930899942702 1.0353479750121173 0.9503201649495792 1.0 13.63937087816332 -6.2699091563912335 24.65610945293765 1.0170495953199705 1.0762950363881871 0.19384140386482662 0.06013370860587828 601.9152150395598 1752219.5123824552 0.007245348311888007 0.017115012996951763 5.371441418206163e-07 6.2699091563912335 0.05924544106821661 GEAAAERPGEAAVAS(ph)SPSK ddPTM_A549_MK2206_60min_R1 2 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.494)S(0.494)PS(0.013)K;GEAAAERPGEAAVAS(0.995)S(0.005)PSK 219.66 4.865499999999999e-67 34381000.0 9076.6 9077.7 8886.599999999999 7640.3 11823.0 9416.5 8740.4 8669.599999999999 12045.2 11853.8 11426.6 True False 10608.50817843565 9539.71615600837 10146.853506802736 9512.173842986103 10083.852361833393 10412.94777983318 10328.417542429866 9898.542349536474 9316.981432231887 9176.018347178358 8589.05986188335 1.235118668285715 1.1106822294188279 1.1813695177318049 1.107475555642517 1.174034472222467 1.2123501229795715 1.2025085059967346 1.152459350465627 1.0847498541230243 1.0683379199509158 1.0 13.06828451069097 -9.20869055529379 0.9691954029675909 1.0194534473438008 1.172441975811888 0.6250958676370364 0.04165441945130255 0.174931710695883 0.3455822696797908 0.010446292709845813 0.00873474525218231 6.184569078115162e-10 9.20869055529379 0.1529885284680872 GEAAAERPGEAAVAS(ph)SPSK ddPTM_A549_PD325901_60min_R1 2 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.699)S(0.292)PS(0.009)K;GEAAAERPGEAAVAS(0.485)S(0.485)PS(0.03)K 253.31 3.0833999999999996e-97 863415000.0 27098.9 29452.5 30503.8 28493.7 34313.9 26508.3 29186.8 28313.6 30300.5 28682.7 32642.5 True False 29849.96037884422 31934.565538557727 32573.971302250622 30253.691135112105 31903.810040528584 26292.42519359885 30297.519645629796 27748.863036410483 29027.075357827125 26871.669426979788 28627.67943785633 1.0426957743341077 1.1155135926361002 1.1378488212067877 1.0567985854663997 1.1144392653195634 0.9184267013564007 1.0583295691639372 0.9693018638358885 1.0139513899768853 0.9386604137897935 1.0 14.80512310964284 -7.23144386755924 24.997929741916767 1.002436053057981 1.0951138488399674 0.5810708888252635 0.04504242451148983 363.83131958476247 303213.0619082667 0.005345070162021467 0.009257287507705762 5.8688921998498083e-08 7.23144386755924 0.09267779578198643 GEAAAERPGEAAVAS(ph)SPSKANGQENGHVK ddPTM_A549_MK2206_60min_R1 1 GEAAAERPGEAAVASSPSKANGQENGHVK 29 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.494)S(0.494)PS(0.013)KANGQENGHVK 143.83 2.9501e-36 40031000.0 1709.1 1973.7 1881.1 1456.2 2323.7 1848.5 1557.1 1816.8 2873.4 2702.8 2824.4 True False 1997.5542965167983 2074.1528996456946 2147.868265888711 1812.9690653713023 1981.8868081867777 2044.1070430650082 1840.004914571134 2074.3369637166497 2222.57948787692 2092.2356028238773 2123.02353052556 0.9409006861183015 0.9769806456795288 1.0117025247275524 0.8539561805622083 0.9335208864577004 0.9628282558691114 0.8666907776173521 0.9770673447049087 1.0468934780608459 0.9854980751465995 1.0 11.051904646100576 -8.528840217745131 8.847236064065225 1.0216628315182876 0.9365117348549339 0.3509810280601213 0.044840272771637775 0.0882575828492086 71.50115403220511 0.007458649331833662 0.008582376887569429 2.9591009557606704e-09 8.528840217745131 -0.08515109666335374 GEAAAERPGEAAVASS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.025)S(0.928)PS(0.047)K;GEAAAERPGEAAVAS(0.12)S(0.849)PS(0.032)K 207.98 1.3908e-66 1320060000.0 30007.0 33275.0 31932.0 29533.0 40514.0 35669.0 34658.0 37710.0 41435.0 42344.0 42730.0 True False 35071.44799928589 34968.555370983675 36460.43775788545 36768.58632578674 34554.44426857126 39443.469904834026 40954.90997958152 43055.507982031515 32050.038658098507 32778.460990814805 32118.96171199445 1.091923466074835 1.0887199805691439 1.1351686298212351 1.1447626064467689 1.075826939189859 1.2280431185328238 1.2751006818594448 1.3405012393645632 0.9978541319450497 1.0205330198632814 1.0 14.97113763612922 -8.861128233637592 24.999996290168976 0.9989835203990602 1.1696003362005558 0.4717146274751499 0.07827170447138565 7.839864263496607 1955.8228328259313 0.014489263721941275 0.015424968382845156 1.3768028818500641e-09 8.861128233637592 0.17061681580149557 GEAAAERPGEAAVASS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.197)S(0.779)PS(0.023)K;GEAAAERPGEAAVAS(0.1)S(0.899)PS(0.001)K 202.16 8.0121e-55 763216000.0 29027.7 30641.7 29736.9 26844.7 37122.1 27585.9 28003.6 29270.9 32046.4 29356.9 36025.5 True False 31974.570734936686 33223.98359605552 31755.024856506287 28502.836150262847 34514.771760292686 27361.24957647601 29069.29232215792 28687.06893692318 30699.601252357934 27503.30032392009 31594.591884460246 1.0120267054521863 1.051571855004612 1.0050778618262497 0.9021428811138379 1.0924265737158874 0.8660105399219795 0.9200717777416713 0.9079740305502371 0.9716726636199244 0.8705065862062156 1.0 14.94739000981269 -6.005693333927372 23.657097767633445 0.969822224475734 1.0309307101950553 0.1497242728513697 0.06623005935483466 177.5168276462811 737651.9254554702 0.00799707214397043 0.023775840242715923 9.869761679074464e-07 6.005693333927372 0.06110848571932137 GEAAAERPGEAAVASS(ph)PSKANGQENGHVK ddPTM_A549_MK2206_60min_R1 3 GEAAAERPGEAAVASSPSKANGQENGHVK 29 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.036)S(0.944)PS(0.02)KANGQENGHVK;GEAAAERPGEAAVAS(0.132)S(0.866)PS(0.002)KANGQENGHVK;GEAAAERPGEAAVAS(0.029)S(0.843)PS(0.128)KANGQENGHVK 267.05 8.662799999999996e-153 591929000.0 10480.1 13167.599999999999 12429.0 12918.3 17254.8 12309.300000000001 11559.7 13475.4 21299.7 21706.6 19703.3 True False 12248.884666155109 13837.77459663305 14191.619093472334 16083.284079924528 14716.641777295341 13611.861955747952 13659.947858819569 15385.579216681715 16475.351958631614 16803.063984111566 14810.42682658414 0.8270446766712244 0.9343265227032338 0.9582181026679751 1.085943320084176 0.993667633594431 0.9190729014855392 0.9223196615981718 1.038834288628684 1.112415742742741 1.1345428582754091 1.0 13.854325598280395 -8.354415575561108 5.852979366740084 1.0540390411562963 0.9545041460976206 0.4224994203132143 0.06786881533987829 0.22271788429079625 11.431454417478937 0.01190170003513396 0.014417041161296244 4.421650629578443e-09 8.354415575561108 -0.09953489505867574 GEAAAERPGEAAVASS(ph)PSKANGQENGHVK ddPTM_A549_PD325901_60min_R1 4 GEAAAERPGEAAVASSPSKANGQENGHVK 29 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.149)S(0.849)PS(0.003)KANGQENGHVK;GEAAAERPGEAAVAS(0.06)S(0.9)PS(0.039)KANGQENGHVK;GEAAAERPGEAAVAS(0.036)S(0.482)PS(0.482)KANGQENGHVK;GEAAAERPGEAAVAS(0.152)S(0.842)PS(0.006)KANGQENGHVK 269.34 4.945299999999999e-153 1183883000.0 27232.1 25106.0 25023.5 30998.8 35381.6 32917.3 31836.800000000003 34378.6 36630.899999999994 32994.5 37343.3 True False 29996.682744787544 27221.770729514672 26721.745188529578 32913.52547261722 32896.51847589364 32649.232422496043 33048.366845765435 33692.89185351003 35091.430660386126 30911.22163912342 32750.31083868272 0.9159205508778636 0.831191217194859 0.8159234066556535 1.0049836056438806 1.0044643129627406 0.9969136654401677 1.0091008604025422 1.0287808265231484 1.0714838962364355 0.9438451375738677 1.0 14.999220979124665 -6.3323048806609 5.271250872489058 1.0267101618593666 0.8522835592388812 0.7358516203638583 0.03972946303841419 0.06360956486702879 3.329110648468219 0.0051901479194747056 0.012384759780494185 4.652593604220731e-07 6.3323048806609 -0.17442660262048537 GEADRDT(ph)YRR ddPTM_A549_MK2206_60min_R1 3 GEADRDTYRR 10 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 1 GEADRDT(1)YRR;GEADRDT(0.999)Y(0.001)RR;GEADRDT(1)YRR 83.617 0.00033278 69858000.0 1477.2600000000002 882.4399999999999 955.4599999999999 1244.62 2086.23 1441.6000000000001 1324.84 1794.9199999999998 2636.61 2758.32 2289.23 True False 1726.5853724605954 927.3524267940143 1090.958595144345 1549.5519558731153 1779.348330612171 1594.1491551433671 1565.5462789932703 2049.3554067119594 2039.422044800991 2135.2135962635625 1720.75101146616 1.003390589896829 0.5389230752239202 0.634001426048733 0.9005091065167091 1.0340533399402645 0.9264263943596801 0.9098040730828059 1.1909656847830723 1.1851929949256914 1.2408614506315245 1.0 10.748822642638405 -6.811668109538355 1.0528275574673158 1.08366312790913 0.7075378341622536 0.5109917580757699 0.14648321021461141 0.31581218273030165 0.6764000044890562 0.02324589437939824 0.0711734652707753 1.542879080030971e-07 6.811668109538355 -0.3761252937468764 GEADRDT(ph)YRR ddPTM_A549_PD325901_60min_R1 4 GEADRDTYRR 10 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 1 GEADRDT(1)YRR;GEADRDT(0.936)Y(0.064)RR;GEADRDT(1)YRR;GEADRDT(1)YRR 95.417 0.00019265 160310000.0 3493.02 3793.08 3768.0699999999997 3429.28 3896.12 3792.56 4401.5199999999995 4754.23 5191.849999999999 4648.83 4916.3 True False 3847.628818974587 4112.736163415416 4023.7938894456274 3641.0988371400467 3622.469972084321 3761.674648779261 4569.0222522041595 4659.4031530287175 4973.654599644715 4355.302080425709 4311.626266993434 0.8923845854704843 0.953871209779806 0.9332427349394277 0.8444838702773381 0.8401632580762449 0.8724491446709589 1.059698120679233 1.0806602577541569 1.1535449251989374 1.0101297771948892 1.0 12.074016414950378 -7.785942141843333 7.147400289812074 1.07450114807763 0.8899678156253245 0.7459046234255855 0.04952384765448125 0.07924823026826493 15.25164158181023 0.010017133397002567 0.014062193638991308 1.637034598099964e-08 7.785942141843333 -0.18453333245230563 GEADRDTYRR ddPTM_A549_MK2206_60min_R1 5 GEADRDTYRR 10 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 0 ;;;; 140.07 3.6389e-08 213983200.0 3378.6499999999996 4210.96 3919.8100000000004 2843.47 5227.48 3373.71 3380.7400000000002 2528.4500000000003 6134.340000000001 5996.26 6505.969999999999 False True 3948.8835199382593 4425.279877535609 4475.6979997412345 3540.120277648219 4458.524616800884 3730.7137529125475 3994.9766969926254 2886.8655305533734 4744.9217845280555 4641.700701416566 4890.358093362616 0.8074835103175445 0.9048989446277503 0.9152086440900566 0.7238979661740942 0.9116969619979705 0.7628712829794646 0.8169088276817117 0.5903178203803806 0.9702606013592435 0.9491535410702259 1.0 12.255724394134768 -8.960554103922426 24.999679553156042 0.986879895100623 0.809247202451747 0.40739901446800453 0.09040090233334223 97.18982738081479 61596.42332888699 0.015051413305725559 0.015998882499084415 1.0950801230076316e-09 8.960554103922426 -0.17763269264887604 GEADRDTYRR ddPTM_A549_PD325901_60min_R1 3 GEADRDTYRR 10 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 0 ;; 83.883 0.00031468 70819500.0 1447.52 1432.71 1415.19 1601.1299999999999 1742.7000000000003 2401.87 1894.82 2242.23 1769.1399999999999 1805.79 2530.19 False True 1594.4711647920979 1553.4494997961824 1511.2333036287964 1700.0281636699365 1620.298763988623 2382.3099670574593 1966.9284119852882 2197.5069636545927 1694.7891981500736 1691.77211122195 2218.9926701959025 0.718556300887344 0.7000696850697741 0.681044747883452 0.7661260834718532 0.7301956359529461 1.0735997459816478 0.8864059978222637 0.9903173602914997 0.763765117800254 0.7624054526834434 1.0 11.115689186676738 -7.103816491439362 10.841176039017311 0.905729990270276 0.7171592932250228 0.5332731133290314 0.09009555793157138 0.3633501375289973 35.966634806702785 0.014739207678703297 0.02554318477930337 7.873784215020527e-08 7.103816491439362 -0.1885706970452532 GEAEALSRT(ph)LDKVSLEETAQLPSAPQGSR ddPTM_A549_PD325901_60min_R1 1 GEAEALSRTLDKVSLEETAQLPSAPQGSR 29 2 Q9BRP8;Q9BRP8-2 Q9BRP8 WIBG Partner of Y14 and mago 1 GEAEALS(0.264)RT(0.725)LDKVS(0.003)LEET(0.007)AQLPSAPQGSR 48.983999999999995 0.0035694000000000004 3803800.0 1368.9 1216.5 1208.3 1406.0 1342.7 1809.7 1659.8 1937.0 1542.6 1439.4 1882.1 True False 1507.8697202690814 1319.0187243071214 1290.3025040981586 1492.845426742319 1248.3933840635357 1794.9624032041231 1722.9645972774103 1898.365015452895 1477.7698865360023 1348.51603835046 1650.6136316149011 0.9135207000525228 0.7991081007956058 0.7817108009920971 0.90441845271917 0.7563207768023534 1.0874515809299334 1.0438327687817068 1.1500965332484276 0.8952851583384812 0.8169786148143707 1.0 10.688786744715623 -7.2542762736134065 24.9800017063458 0.9823584336337327 0.8305818813436893 0.4308100830679279 0.095072983610002 441.6518069735953 1540177.3928051349 0.013308217695431303 0.022749839704651074 5.568314115539871e-08 7.2542762736134065 -0.1517765522900434 GEAEQS(ph)EEEADEEDK ddPTM_A549_PD325901_60min_R1 2 GEAEQSEEEADEEDK 15 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDK;GEAEQS(1)EEEADEEDK 85.493 0.00011307 2674300.0 635.89 677.23 1766.35 1195.71 889.9200000000001 975.6600000000001 800.52 562.52 921.4300000000001 956.05 1004.01 True False 700.4450846825235 734.3025488388919 1886.2251329254188 1269.5662910455608 827.4150892573327 967.7145484390426 830.9842266613523 551.3000973115969 882.7055014591397 895.6848398394865 880.5231349437738 0.7954874288763017 0.8339389616216968 2.142164195431236 1.4418318391221254 0.9396858031562881 1.099022285769739 0.9437392314676833 0.6261051816052515 1.0024784885584013 1.0172189739190451 1.0 9.782217099828005 -6.7693639767447715 24.882301482168454 0.9719064601564 1.3297407506474765 0.19035952254160537 0.34969961569403973 214.456300515509 673369.5228483565 0.05054370608649158 0.09675229031603097 1.700732548373849e-07 6.7693639767447715 0.3578342904910765 GEAEQS(ph)EEEADEEDKAEDAR ddPTM_A549_MK2206_60min_R1 1 GEAEQSEEEADEEDKAEDAR 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAR 96.90299999999999 3.6854999999999995e-07 27125000.0 495.74 511.34 635.6 292.94 675.09 576.45 464.52 663.55 742.04 635.36 494.58 True False 579.408792320658 537.3650218902715 725.7376374455714 364.7103131505763 575.7851552863151 637.4495563834588 548.9172711557273 757.6102445366485 573.9691247943863 491.8317347233158 371.76213628640784 1.5585470809600628 1.445453878811053 1.9521558722872698 0.9810313572913226 1.5487998886544128 1.7146704684641787 1.4765281818071923 2.037889743437941 1.5439149627443418 1.322974253473747 1.0 8.538236030033373 -10.381533463977894 0.8915630099027136 1.0210392143226008 1.5797144812631467 0.23051098481256815 0.27754456956296536 0.4201682919197018 0.6346873907106354 0.1376284345493733 0.048357078897656024 4.15400041916457e-11 10.381533463977894 0.5586752669405459 GEAEQS(ph)EEEADEEDKAEDAR ddPTM_A549_PD325901_60min_R1 2 GEAEQSEEEADEEDKAEDAR 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR 152.95 1.9922000000000002e-22 65367000.0 1080.71 1114.1399999999999 1410.66 1073.56 1081.84 1134.24 1072.96 800.51 1222.78 956.1 1149.79 True False 1190.4228836233476 1208.0324878746692 1506.3958705876923 1139.871362968339 1005.85529054539 1125.0031254960736 1113.792079946241 784.543200062054 1171.390808931993 895.7316828309533 1008.3731191193333 1.180538097508002 1.1980014787876427 1.4938873736571927 1.1304063360632326 0.9975030784476462 1.1156615583709724 1.1045436047709958 0.7780286733022375 1.161664057402712 0.8882938922581001 1.0 9.977813849591435 -6.509690408417624 24.42037725898119 1.055987158497066 1.2866313600637298 0.4460867227463162 0.1318019731513078 343.50329285331503 636051.8353245409 0.017385337435566577 0.03875685581903376 3.0924991688754956e-07 6.509690408417624 0.23064420156666388 GEAEQS(ph)EEEADEEDKAEDAREEEYEPEK ddPTM_A549_MK2206_60min_R1 2 GEAEQSEEEADEEDKAEDAREEEYEPEK 28 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAREEEYEPEK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEK 176.44 5.719099999999999e-58 112185000.0 2435.33 2503.57 2804.5 2118.8999999999996 4917.4 4685.1 3477.4 5846.0 5013.0 3230.6000000000004 3084.3 True False 2846.3541658979902 2630.9910193879373 3202.220270950451 2638.0305951210335 4194.056974040388 5180.87417228232 4109.198567805318 6674.688402624143 3877.5635041160303 2500.805216250855 2318.383187650468 1.2277324046602438 1.1348387244190972 1.3812299399029437 1.1378751403880338 1.809043904554361 2.234692780675658 1.77244149702868 2.879027262697031 1.672529168073243 1.0786850204798373 1.0 11.17890332263487 -6.746394421224024 24.784379294827165 1.5784096814566067 1.2257926022265588 0.15255312208670813 0.508693687383399 503.78811586444675 829912.0439838936 0.08578342577112474 0.17800541333288902 1.7931044104459914e-07 6.746394421224024 -0.3526170792300478 GEAEQS(ph)EEEADEEDKAEDAREEEYEPEK ddPTM_A549_PD325901_60min_R1 2 GEAEQSEEEADEEDKAEDAREEEYEPEK 28 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAREEEYEPEK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEK 208.34 3.2658999999999998e-90 133601000.0 3825.7 3952.5 5397.0 3990.7 4648.7 3181.66 3920.1 2938.0 4116.700000000001 4324.1 3142.6 True False 4214.082247668511 4285.591046299957 5763.272874797456 4237.196475462714 4322.191349144379 3155.7496158360095 4069.281550661032 2879.3992851835887 3943.689415209879 4051.0755880444754 2756.0801225827463 1.5290129677795645 1.5549588022440701 2.091112238564619 1.5373995990697111 1.5682386421676364 1.1450137425173001 1.4764743293629916 1.0447444040506628 1.4309052131308193 1.4698685843168369 1.0 11.428402114203772 -6.443311804808525 0.054438798126802905 3.9494642104839884e-12 3.1379524033883768 0.25290548907510646 0.2486283553365313 65.35764388830592 0.8032431023297505 17.40039214954061 29.71436277016849 3.603198559334526e-07 6.443311804808525 3.1379524033844275 GEAEQS(ph)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK ddPTM_A549_PD325901_60min_R1 9 GEAEQSEEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK 41 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK 234.0 8.031599999999997e-130 485235000.0 22956.8 23018.729999999996 22683.399999999998 21117.800000000003 23665.7 19415.26 21642.23 22546.8 23520.9 21665.879999999997 24115.600000000002 True False 25287.357436097074 24958.59916133995 24222.83193036514 22422.19854399642 22003.50287423281 19257.148559668938 22465.836905732685 22097.086386377563 22532.39836913305 20297.892639277783 21149.534081383725 1.1956460761164263 1.1801016072173924 1.145312792100068 1.06017458624457 1.0403776645652334 0.9105235361482263 1.0622379112127864 1.0448025143886217 1.0653850946516383 0.9597323780831856 1.0 14.368338261056326 -6.219232431472325 1.925881265027336 1.026440933335346 1.1895231811761806 0.7137849133013301 0.044687143445141 0.14612028293718718 1.0303815743645024 0.006256194738912033 0.02170479688470745 6.036254866302462e-07 6.219232431472325 0.1630822478408347 GEAGT(ph)GTPVK ddPTM_A549_PD325901_60min_R1 1 GEAGTGTPVK 10 0 A0A087WY99;O14841 A0A087WY99 OPLAH 5-oxoprolinase 1 GEAGT(0.699)GT(0.301)PVK 72.2 0.0023869 7491300.0 2968.7 3148.8 3098.3 3833.6 3429.2 3371.1 3318.3 3542.9 4071.2 4065.3 4325.1 True False 3270.0802385585694 3414.1604267145626 3308.569269591432 4070.3927652627026 3188.3448220977702 3343.646879284641 3444.5797223434347 3472.234080148716 3900.1016219793664 3808.616264211562 3793.1401190678557 0.8621037282857282 0.9000881379392793 0.8722507383683195 1.0730931728045365 0.8405555086325915 0.8814983824289424 0.9081076928921682 0.9153983167386919 1.0281986690588683 1.0040800351840178 1.0 11.889176950612871 -8.738933410765132 8.861869728375 1.0133232652604114 0.9077276292459914 0.39305288311150677 0.05759192699864399 0.15964990158379339 55.424804520134415 0.00944500867219791 0.010608367327963627 1.824175376908607e-09 8.738933410765132 -0.10559563601442001 GEAGVPAEFSIWTR ddPTM_A549_MK2206_60min_R1 2 GEAGVPAEFSIWTR 14 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95 O75369-8 FLNB Filamin-B 0 ; 68.069 0.0095728 1608350.0 1532.63 1625.1599999999999 1283.29 992.76 1622.99 1735.13 1483.6 1178.52 2577.8999999999996 1764.12 2075.2 False True 1791.3004747940663 1707.8737023804001 1465.279818687111 1235.9862445666895 1384.250320961852 1918.7403049139239 1753.150915970544 1345.5788190661315 1994.0097660603865 1365.6040667654486 1559.8705673936556 1.1483648145160534 1.0948816767752974 0.9393598733870633 0.792364616912969 0.8874135777013584 1.2300637918438924 1.123907939938783 0.8626220964694665 1.2783174500126135 0.8754598588568784 1.0 10.607210608925083 -7.253803724023977 24.946430721899695 1.117625534086889 0.9674311049283424 0.010730428772442457 0.154575725252768 800.6412505928879 2615772.9981912603 0.02316401817964208 0.03963984991018976 5.574376215613711e-08 7.253803724023977 -0.15019442915854664 GEAGVPAEFSIWTR ddPTM_A549_PD325901_60min_R1 1 GEAGVPAEFSIWTR 14 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95 O75369-8 FLNB Filamin-B 0 90.65299999999999 0.00018855 1319500.0 1664.8 1537.5 1507.4 1748.2 1931.6 1583.2 1402.1 1681.5 2023.7 1785.9 2265.9 False True 1833.8092704390162 1667.07052085672 1609.7012287325704 1856.1823435497326 1795.931079658244 1570.306944108287 1455.4576827585595 1647.9611633887696 1938.6509266063192 1673.1379692163985 1987.2086647235553 0.9228065995244245 0.838900589782115 0.8100313053719999 0.9340651419753899 0.903745596292516 0.7902073757950002 0.7324131122189079 0.8292844091528863 0.9755648518551568 0.8419538415454484 1.0 10.956527653855689 -8.792395917099373 6.387896300638053 0.9889122381282908 0.843051288975917 0.17355336709621738 0.0716726588248587 0.09611303835222011 11.790086534084818 0.01038806209941733 0.011147702095158012 1.6128875252194556e-09 8.792395917099373 -0.1458609491523738 GEAPGAET(ph)PSLR ddPTM_A549_MK2206_60min_R1 2 GEAPGAETPSLR 12 0 C9JE12;C9JCW7;A0A590UJA9;Q9BVT8 C9JE12 TMUB1 Transmembrane and ubiquitin-like domain-containing protein 1 1 GEAPGAET(0.994)PS(0.006)LR;GEAPGAET(0.911)PS(0.089)LR 118.61 2.0368e-05 16046400.0 2125.9 1598.35 1588.44 1972.79 2044.7199999999998 2011.21 1834.7800000000002 1679.8 2586.1 2942.6 2772.8 True False 2484.699946735158 1679.69918789517 1813.7046771932737 2456.1236385619086 1743.9443966242054 2224.0349072668505 2168.135776222997 1917.9167941717458 2000.3524791530965 2277.8646162755435 2084.237234613109 1.192138738081985 0.8059059496684252 0.8702006888049605 1.1784280588470686 0.836730276027301 1.0670737813969107 1.040253834936147 0.9202008112707779 0.9597527795459503 1.092900836069353 1.0 11.025303783833552 -14.550686607942382 11.191964553502057 0.9821163447174723 0.9812804989137544 0.0 0.12618893234077536 0.0 0.0 0.0 0.013863288384077178 2.8139306637317596e-15 14.550686607942382 -0.0008358458037179828 GEAPGAET(ph)PSLR ddPTM_A549_PD325901_60min_R1 2 GEAPGAETPSLR 12 0 C9JE12;C9JCW7;A0A590UJA9;Q9BVT8 C9JE12 TMUB1 Transmembrane and ubiquitin-like domain-containing protein 1 1 GEAPGAET(0.966)PS(0.034)LR;GEAPGAET(0.998)PS(0.002)LR 124.21 7.0291999999999995e-06 17143100.0 1982.52 2914.4 2480.6000000000004 2480.7 2894.8 2906.2 2607.8 2885.9 2973.3 2769.1 3103.7 True False 2183.783970945913 3160.006716087691 2648.948433059584 2633.927204921531 2691.479234517852 2882.53287074754 2707.041256042916 2828.338460555246 2848.3425409292727 2594.2585534224377 2721.96457597533 0.8022822891306083 1.1609286704090933 0.9731752045709182 0.9676566800939158 0.9888002431308077 1.0589898546768104 0.9945174452069911 1.0390798195975055 1.046428952848756 0.9530831430797982 1.0 11.410432576192727 -7.0762504169938785 19.54006446695598 1.0238977164183727 0.9876681116114686 0.037223953310773106 0.08169580060358793 38.8417179470605 9951.734537502736 0.010440093062778627 0.018082877578426814 8.389760880103561e-08 7.0762504169938785 -0.03622960480690407 GEAVLRPGLDAEPELS(ph)PEEQR ddPTM_A549_MK2206_60min_R1 1 GEAVLRPGLDAEPELSPEEQR 21 1 C9JQV0;Q9BRJ6 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 GEAVLRPGLDAEPELS(1)PEEQR 202.47 2.7461e-56 51369000.0 5645.6 5907.2 5788.8 5247.1 8093.4 6075.9 6312.3 5929.5 9119.8 8076.0 8053.9 True False 6598.439258332003 6207.851248308786 6609.738885533237 6532.639735551266 6902.871581262152 6718.847705143994 7459.163202265345 6770.02478333217 7054.179861328027 6251.625990974404 6053.894353667963 1.089949522216903 1.0254310507661144 1.0918160277323798 1.079080564330172 1.140236544940664 1.109838942113872 1.2321264241662808 1.1182925217765511 1.1652300897940193 1.0326618909671985 1.0 12.563647783618526 -5.93210520660867 9.204145725275348 1.0997342371478984 1.0576527325833125 0.08063544018356084 0.0609458337903216 0.8741759056847772 109.72739719316485 0.010400948404901559 0.03246017825838065 1.1692161174159742e-06 5.93210520660867 -0.042081504564585925 GEAVLRPGLDAEPELS(ph)PEEQR ddPTM_A549_PD325901_60min_R1 2 GEAVLRPGLDAEPELSPEEQR 21 1 C9JQV0;Q9BRJ6 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 GEAVLRPGLDAEPELS(1)PEEQR;GEAVLRPGLDAEPELS(1)PEEQR 195.41 6.406399999999999e-56 129225000.0 8415.2 8782.4 8906.8 8849.0 10225.3 9001.1 8581.6 8145.0 9880.3 9268.1 9565.8 True False 9269.504909057181 9522.523669835477 9511.26900893941 9395.582632462862 9507.11020336997 8927.798025905193 8908.17748403171 7982.5415853711065 9465.065350668776 8682.910584296164 8389.267242602322 1.1049242610826417 1.135084077603138 1.1337425229034719 1.1199527158641789 1.1332467936044552 1.0641928273029744 1.0618540602442919 0.9515183334289574 1.1282350504467593 1.0350022633922857 1.0 13.034329089173378 -7.335458014722416 4.048780964273251 1.0526616623026992 1.1262416164886835 0.4886894507416353 0.04246780880669469 0.22881180098888393 7.239942904194108 0.008137609003502647 0.013375306535279269 4.6189364315439954e-08 7.335458014722416 0.07357995418598429 GEDATDDQFES(ph)PKKK ddPTM_A549_MK2206_60min_R1 1 GEDATDDQFESPKKK 15 2 Q5T5P2;Q5T5P2-3 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 GEDATDDQFES(1)PKKK 59.003 0.0015325 10700000.0 1597.7 2044.7 1872.6 1499.5 2560.2 2006.1 1747.3 1618.4 2437.7 2647.7 2138.8 True False 1867.3526999853057 2148.766496380174 2138.1628380751686 1866.877567315113 2183.5979714764326 2218.384170458593 2064.761792582457 1847.8131561421326 1885.5648422069912 2049.5827310924874 1607.6769321229517 1.1615223573056122 1.3365661056930813 1.329970465677893 1.1612268174115583 1.3582318237240438 1.3798693793094343 1.2843138763308128 1.149368457817006 1.1728505923867962 1.2748722645326478 1.0 10.650761806072001 -9.452893447718786 0.5545685531200463 1.010621006395779 1.2927401368939448 0.07643170311518799 0.1071485567225479 0.3353020097893126 0.23196174782814444 0.03785476307501978 0.0214752982653115 3.524573343247743e-10 9.452893447718786 0.28211913049816584 GEDEEENNLEVR ddPTM_A549_PD325901_60min_R1 1 GEDEEENNLEVR 12 0 P04843;F8WF32 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 0 103.08 0.00055532 998470.0 469.48 514.01 535.49 486.48 587.25 513.43 522.08 412.65 401.67 410.26 499.62 False True 517.1412639870911 557.3274266182515 571.8315715629587 516.5287647237582 546.0035859025182 509.24879630717373 541.9480400931379 404.4193720323374 384.7892067450513 384.35611358459045 438.16990735212613 1.1802299868381907 1.2719436393662855 1.3050452848726057 1.1788321289454973 1.246100146863198 1.1622176415185137 1.236844500271929 0.9229738629844659 0.8781735128054411 0.8771850990572719 1.0 8.775346596045734 -8.260617666520128 24.99675196398574 0.9394011170486357 1.22722226901679 0.8916017201799679 0.051206003054627545 19.642329896754767 597525.822462597 0.009410191548211865 0.011789671125341695 5.487598560185833e-09 8.260617666520128 0.2878211519681543 GEDHPPS(ph) ddPTM_A549_PD325901_60min_R1 1 GEDHPPS 7 0 Q9BTT4 Q9BTT4 MED10 Mediator of RNA polymerase II transcription subunit 10 1 GEDHPPS(1) 54.157 0.043148 1171600.0 170.02 207.37 192.98 170.69 225.28 129.22 95.804 109.44 101.14 178.8 283.72 True False 187.28030523789133 224.84579766507827 206.07678328301145 181.2331336348838 209.45710997380897 128.16767516275442 99.44987364596037 107.25713334598086 96.8894375238242 167.5105374858011 248.82423864926406 0.7526610199011865 0.9036330177704868 0.8282022057083102 0.7283580354498549 0.8417874042771776 0.5150932073921308 0.3996792040269928 0.43105580842213537 0.38938906454526295 0.6732082790451916 1.0 7.958983218956359 -7.237238151913615 24.007772540581353 0.6432754693594015 0.8124510396482998 0.2756523391152107 0.17411674979800634 973.7134524003038 965929.268995783 0.03824930436348494 0.06622340460100244 5.7911104508542635e-08 7.237238151913615 0.1691755702888983 GEDLQSIS(ph)PGSR ddPTM_A549_MK2206_60min_R1 2 GEDLQSISPGSR 12 0 Q13077 Q13077 TRAF1 TNF receptor-associated factor 1 1 GEDLQS(0.007)IS(0.834)PGS(0.159)R;GEDLQS(0.002)IS(0.711)PGS(0.287)R 80.469 0.00081613 4660200.0 1005.26 1166.05 937.22 897.92 1437.26 1421.77 1083.86 1071.77 1323.95 1650.77 1383.83 True False 1174.9233117526633 1225.3969643977614 1070.1318888715211 1117.9104403091599 1225.840957926809 1572.2207577054555 1280.7833322889155 1223.6966796579666 1024.0774389137082 1277.8599104904426 1040.1868192349466 1.1295310515632324 1.1780546933857863 1.0287881648592692 1.07472082864055 1.1784815335656824 1.511479215687253 1.2313012514722372 1.1764200978416461 0.9845129932206921 1.2284907738307083 1.0 10.022626946662061 -8.743218191054519 6.569169613402899 0.9925143158217489 1.1914997545379213 0.05419913259577891 0.13625736689876583 0.13257831997538527 21.770599255915062 0.021277826395926396 0.023690602569445423 1.806266423495461e-09 8.743218191054519 0.19898543871617247 GEDLQSIS(ph)PGSR ddPTM_A549_PD325901_60min_R1 2 GEDLQSISPGSR 12 0 Q13077 Q13077 TRAF1 TNF receptor-associated factor 1 1 GEDLQS(0.277)IS(0.64)PGS(0.083)R;GEDLQSIS(0.979)PGS(0.02)R 101.53 0.00022541 5141800.0 1339.02 1065.35 1568.03 1132.4 1363.29 1258.3899999999999 1538.63 1475.69 1559.44 1568.85 1653.6 True False 1474.9563246655755 1155.1307833461508 1674.4459451303783 1202.3457761330042 1267.537213495179 1248.1420890578745 1597.1834066206416 1446.2562052935912 1493.9021598986787 1469.7925432583845 1450.2176830340586 1.0170585712206737 0.7965223406526497 1.154616968693419 0.8290795169574324 0.8740323803274234 0.8606584402188411 1.101340457578141 0.9972683564772293 1.0301227032159932 1.0134978772175585 1.0 10.50205375501436 -7.753341518255504 24.99599093925314 1.018984170849485 0.9204616363019447 0.230953947353441 0.09599818061376154 211.69454495780522 653443.685676331 0.013515140783777987 0.019853528833350457 1.7646495988731256e-08 7.753341518255504 -0.09852253454754023 GEDRS(ph)PPTAL ddPTM_A549_MK2206_60min_R1 1 GEDRSPPTAL 10 1 A0A499FJN1;A0A499FIS5;Q9BUB5-2;Q9BUB5;Q7Z319 A0A499FJN1 MKNK1;DKFZp686E14208 MAP kinase-interacting serine/threonine-protein kinase 1 1 GEDRS(1)PPTAL 61.213 0.0063381 9429800.0 7097.4 6495.8 8820.4 7253.8 11252.0 8272.4 9460.2 8698.7 12338.0 12200.0 11604.0 True False 8295.26760522984 6826.408474194918 10071.265351360791 9030.981325635457 9596.845705434269 9147.779877225295 11178.995885187749 9931.767363651497 9543.462699737405 9444.01152673201 8722.406545892432 0.9510296913569407 0.7826290185258127 1.1546429644584228 1.0353772526102145 1.1002520525661152 1.0487678863734207 1.281641233571276 1.1386499025694439 1.0941318373002948 1.0827300329379164 1.0 13.090510519758743 -5.762408605439069 24.999941301649866 1.0762842564874875 0.866829340214368 0.5297843667430798 0.08288265364062956 15.863012831367444 409225.9669717373 0.012230614856030221 0.041509098169518616 1.7281896289551642e-06 5.762408605439069 -0.20945491627311952 GEDRS(ph)PPTAL ddPTM_A549_PD325901_60min_R1 1 GEDRSPPTAL 10 1 A0A499FJN1;A0A499FIS5;Q9BUB5-2;Q9BUB5;Q7Z319 A0A499FJN1 MKNK1;DKFZp686E14208 MAP kinase-interacting serine/threonine-protein kinase 1 1 GEDRS(0.998)PPT(0.002)AL 58.132 0.0098053 16049000.0 1594.4 1448.2 1571.2 1514.4 1929.3 1672.5 1956.2 1562.4 1925.1 2128.0 1748.2 True False 1756.262314264756 1570.244896458343 1677.8310803931372 1607.941048548059 1793.7926237236757 1658.8797145156068 2030.644261473714 1531.2367063209108 1844.1947417155811 1993.6377168332472 1533.182482752867 1.1455011611607666 1.0241735175834579 1.0943453237089888 1.048760383474354 1.1699798581724445 1.0819845212013168 1.3244635158025302 0.99873089051444 1.2028540388775406 1.3003264381508075 1.0 10.582313704616821 -3.4060426241029704 12.22083307217873 1.1037898666418582 1.1558531233720846 0.0 0.11078215522650454 0.0 0.0 0.01288635849412944 0.0 0.0003926064009083914 3.4060426241029704 0.05206325673022638 GEDS(ph)AEETEAK ddPTM_A549_PD325901_60min_R1 2 GEDSAEETEAK 11 0 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 GEDS(1)AEETEAK;GEDS(1)AEETEAK 164.81 8.658400000000001e-14 10353600.0 2981.8 2559.2 3176.4 2410.3900000000003 2907.3 2923.3999999999996 3137.3 2559.7 2845.3 2901.9 2314.7 True False 3284.5101409148565 2774.8727655131825 3391.9696052448826 2559.2743159071288 2703.101277640513 2899.5927996501805 3256.691668296435 2508.644775454197 2725.7219357972817 2718.6735387586477 2030.0065740922444 1.6179800513126845 1.3669279700505497 1.670915576596921 1.2607221811838498 1.3315726718024328 1.4283662115462794 1.60427641459867 1.2357816016315044 1.3427158170737155 1.3392437115502218 1.0 10.987268684188264 -13.489562388631377 0.16244018355943612 1.5230860472373342e-15 1.5636689009600035 0.21420798391526463 0.1645134280571314 15.487806052223295 0.25225887939165004 5.323898102510563 0.20941510187103077 3.239198863381325e-14 13.489562388631377 1.563668900960002 GEDSAEET(ph)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_A549_PD325901_60min_R1 1 GEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 41 1 Q12906-4;Q12906-6;Q12906-7 Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 GEDS(0.445)AEET(0.555)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 86.891 1.2024000000000001e-09 9309100.0 807.54 606.28 817.23 694.89 597.85 591.46 611.84 716.63 688.41 469.71 843.38 True False 889.5208663204718 657.3733433398451 872.6921422032104 737.8117770903066 555.8590784705333 586.6433458579384 635.1239060116949 702.3362524646404 659.4785217102612 440.0524304387899 739.6496066263082 1.2026246730228882 0.8887631892866923 1.1798723806313318 0.9975152700420076 0.7515167634657702 0.7931368320923438 0.8586821385718351 0.949552661385353 0.8916093726031661 0.5949471567300065 1.0 9.53069817605522 -6.524162336826892 24.995863777301775 0.915889582930566 1.073327644688779 0.3068240912527833 0.141194330448237 39.25741626216683 764477.904762876 0.01529147961191112 0.03202779923442485 2.9911463539873294e-07 6.524162336826892 0.15743806175821295 GEDVNRT(ph)LEGGR ddPTM_A549_MK2206_60min_R1 2 GEDVNRTLEGGR 12 1 P58546 P58546 MTPN Myotrophin 1 GEDVNRT(1)LEGGR;GEDVNRT(1)LEGGR 113.59 1.255e-05 98888000.0 4392.2 5169.0 3848.4 3875.2 5036.9 5411.200000000001 3919.3 5131.8 5928.0 6166.700000000001 6234.700000000001 True False 5133.495981019882 5432.080021415916 4394.160987957108 4824.6241739643365 4295.978682341085 5983.809592336143 4631.386077759068 5859.248365478372 4585.317465070783 4773.638187040848 4686.45192103374 1.0953907278936796 1.1591029019279269 0.9376306557707822 1.0294833394770255 0.9166804129708164 1.2768315333567386 0.9882499929152104 1.2502525288226867 0.9784198242792068 1.018603896396717 1.0 12.194280366647465 GEDVNRT(ph)LEGGR ddPTM_A549_PD325901_60min_R1 2 GEDVNRTLEGGR 12 1 P58546 P58546 MTPN Myotrophin 1 GEDVNRT(1)LEGGR;GEDVNRT(1)LEGGR 131.96 2.4405000000000002e-08 122440000.0 4799.8 4691.6 4123.0 4491.5 5303.4 4107.6 4301.6 3778.0 4493.8 3843.5 4012.4 True False 5287.072162573995 5086.9775971716335 4402.811573613104 4768.929754063394 4930.907479736761 4074.1490674704387 4465.299741925841 3702.644826216334 4304.941213610452 3600.820754064187 3518.9002366992327 1.5024785606122575 1.4456157478176406 1.2511896551358301 1.355233008406258 1.4012637892690039 1.1577904440087325 1.2689475238190728 1.0522164816157038 1.2233768859695024 1.0232801477321212 1.0 11.780908897908661 -2.000000000091255 0.08857743558589282 0.8231555872055997 2.61696508248248 0.775591670666584 0.07798764820588215 48.044602877541536 0.2975506891088185 0.7878055125614549 10.504392704784012 0.009999999997898776 2.000000000091255 1.7938094952768804 GEDVPS(ph)EEEEEEENGFEDR ddPTM_A549_MK2206_60min_R1 2 GEDVPSEEEEEEENGFEDR 19 0 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 GEDVPS(1)EEEEEEENGFEDR;GEDVPS(1)EEEEEEENGFEDR 278.22 2.883699999999999e-126 55162000.0 1307.49 1092.73 1362.21 1671.97 1414.69 1380.27 1643.96 1863.6399999999999 1704.32 1275.52 1553.29 True False 1528.162346938592 1148.3452895728017 1555.391861398257 2081.6027250575844 1206.5909750285107 1526.3292552509265 1942.646252237083 2127.816677158133 1318.2942412397827 987.3791461128874 1167.5652243768752 1.3088453775712325 0.9835384487283516 1.3321669992598173 1.7828577638294487 1.0334248998144522 1.3072753653360327 1.6638438792778067 1.8224392374256781 1.129096870749427 0.8456736510286589 1.0 10.189287430962475 -8.976599868876619 24.463999876469302 1.0569541146984154 1.3986819030957283 0.3202900722049994 0.2649120273480447 129.5555090753414 135447.42956640726 0.046753699657138485 0.04824014107346358 1.0553587886054671e-09 8.976599868876619 0.3417277883973129 GEDVPS(ph)EEEEEEENGFEDR ddPTM_A549_PD325901_60min_R1 2 GEDVPSEEEEEEENGFEDR 19 0 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 GEDVPS(1)EEEEEEENGFEDR;GEDVPS(1)EEEEEEENGFEDR 360.21 7.758099999999996e-256 68448000.0 6654.129999999999 6163.4400000000005 7144.0 5536.22 7370.3 5372.54 5840.56 5424.82 6245.4 6542.200000000001 7197.1 True False 7329.652379088399 6682.854719394564 7628.834800361871 5878.1797357321275 6852.635554154666 5328.787815499962 6062.8257068770645 5316.61770941104 5982.927556963535 6129.124375501162 6311.902326175871 1.1612429978030319 1.0587702999902786 1.208642720709507 0.9312849648124198 1.0856688205925398 0.8442443403157762 0.9605385814882037 0.8423162201611832 0.9478802503251584 0.971042335380141 1.0 12.623859165135135 -6.270648179105367 24.946811395915237 0.9604780559869895 1.1344738369242149 0.5851334694588937 0.07247469978673518 345.38580479945216 935657.1213298596 0.009858336594649615 0.023204505767463076 5.362308809294055e-07 6.270648179105367 0.17399578093722534 GEEGS(ph)DDDETENGPK ddPTM_A549_MK2206_60min_R1 2 GEEGSDDDETENGPK 15 0 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 GEEGS(1)DDDETENGPK;GEEGS(0.997)DDDET(0.003)ENGPK 139.65 2.417e-10 7740000.0 1925.4700000000003 2084.1099999999997 2154.93 1448.25 2541.5 2317.5 1704.48 2122.84 2109.84 2074.81 2324.71 True False 2250.4422627781855 2190.182297046456 2460.5314774395615 1803.0713150144134 2167.648716704691 2562.736311768002 2014.1619528535148 2423.7590709248425 1631.9646087221552 1606.108979981874 1747.4203482679752 1.287865432612594 1.2533803324525445 1.408093639219902 1.0318474984004844 1.2404849919787428 1.4665826195214904 1.1526487916029655 1.3870498150758328 0.9339278956776149 0.9191314394237382 1.0 10.771010980161074 -8.770455801544388 24.999989459451463 0.9687992598888664 1.2745632436885261 0.6121385538000259 0.11582611097625906 89.33609077397351 247703.00608484072 0.018920487520517545 0.020283700556085773 1.696462243633599e-09 8.770455801544388 0.30576398379965974 GEEGS(ph)DDDETENGPK ddPTM_A549_PD325901_60min_R1 2 GEEGSDDDETENGPK 15 0 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 GEEGS(1)DDDETENGPK;GEEGS(1)DDDETENGPK 171.76 2.9403999999999998e-27 10446200.0 2615.7 2216.21 3553.8 3059.5 3141.4 2457.23 2641.1 2532.7 2452.1 3070.8 3064.7 True False 2881.2439384234335 2402.977794489672 3794.9822387354448 3248.478366371355 2920.7589012416697 2437.2191335720104 2741.6085057653745 2482.1833116352864 2349.0467644074483 2876.9091639339954 2687.7613287339614 1.0719865293175455 0.8940443367497837 1.4119491184594977 1.2086186119440572 1.0866883417127886 0.9067840613362921 1.0200342107968259 0.9235132915631649 0.8739789278514322 1.0703737467973504 1.0 11.39218931818814 -7.11604680637864 4.142185397547153 0.9424083640259293 1.1477443413170736 0.3038453436528945 0.12654005376195787 0.1931737936948287 5.641651941264833 0.018351993664629293 0.032733910934095764 7.655140986704861e-08 7.11604680637864 0.20533597729114428 GEEGS(ph)DDDETENGPKPK ddPTM_A549_MK2206_60min_R1 6 GEEGSDDDETENGPKPK 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 GEEGS(0.985)DDDET(0.015)ENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(0.981)DDDET(0.019)ENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK 245.61 4.519499999999999e-75 984580000.0 68505.8 63865.2 60724.3 55580.12999999999 77261.2 63491.0 57168.700000000004 65363.8 79764.40000000001 85536.0 82426.5 True False 80067.90423399476 67115.66588967534 69335.91884445578 69197.26434508685 65896.17982729287 70209.57547808511 67555.51278636111 74629.3188182422 61697.89075757293 66213.35819266795 61957.72519432981 1.2922989664785554 1.0832493555753975 1.119084321236526 1.1168464324351854 1.063566804956285 1.1331851719518986 1.090348500925008 1.20451999462808 0.9958062624807171 1.0686860756264112 1.0 15.918996555453788 -2.000000000009829 0.10737015886101182 0.9204634505673134 1.7488970404505446 0.26422010472997437 0.06977012845446773 61.896460806798444 0.45055478764611934 0.3469014358833112 7.6224219572678065 0.009999999999773678 2.000000000009829 0.8284335898832312 GEEGS(ph)DDDETENGPKPK ddPTM_A549_PD325901_60min_R1 4 GEEGSDDDETENGPKPK 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 GEEGS(0.998)DDDET(0.002)ENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(0.924)DDDET(0.076)ENGPKPK;GEEGS(1)DDDETENGPKPK 255.6 8.578499999999998e-87 1282539000.0 90503.6 87214.8 92394.5 83812.5 104856.7 81345.0 89021.4 87586.1 93474.1 95437.90000000001 97048.3 True False 99691.45884677097 94564.69727636722 98664.94638326367 88989.40777300182 97491.92712797705 80682.55328984883 92409.15809137924 85839.12652553381 89545.70864193878 89411.93470646614 85111.97433986112 1.1712976889561089 1.1110621978848756 1.1592369598816272 1.0455568498230072 1.1454548890932956 0.9479577217616273 1.0857362763361558 1.0085434768880945 1.052092955620713 1.0505212151398913 1.0 16.377074497423703 -2.00000000000213 0.2274353830347352 1.0091299528397204 1.932048094123394 0.47675005672333326 0.04911656108423033 24.95861491442739 0.29364562769381924 0.02528510495410173 8.6715761313822 0.009999999999950958 2.00000000000213 0.9229181412836736 GEEQNPRLS(ph)ISLPSYES(ph)LTGLDETTPTSTR ddPTM_A549_PD325901_60min_R1 1 GEEQNPRLSISLPSYESLTGLDETTPTSTR 30 1 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 2 GEEQNPRLS(0.872)IS(0.131)LPS(0.085)Y(0.034)ES(0.814)LT(0.065)GLDETTPTSTR 81.831 1.6638999999999999e-06 8898600.0 757.35 1246.7 793.89 1432.0 942.1 1348.6 1101.0 1463.2 864.13 1140.0 1248.3 True False 834.235614468398 1351.76378429403 847.7681494483879 1520.4513876920355 875.9301460685605 1337.6174487269047 1142.8991574903177 1434.0153281418054 827.8136211930218 1068.0202054463834 1094.7670136256745 0.7620211461300403 1.2347501956760898 0.774382255673497 1.388835586721388 0.8001064474601175 1.2218284183562973 1.0439656504677084 1.3098817467952386 0.7561550639450212 0.9755684927967364 1.0 10.096408155354828 -8.786005266274334 24.99994765457712 0.8848510277027736 1.0690395651445015 0.09259925447893291 0.21387500425428407 316.5036755938794 322094.51303718134 0.0343824151719425 0.03660929996493102 1.6367966734377186e-09 8.786005266274334 0.18418853744172792 GEEQNPRLS(ph)ISLPSYESLT(ph)GLDETTPTSTR ddPTM_A549_PD325901_60min_R1 1 GEEQNPRLSISLPSYESLTGLDETTPTSTR 30 1 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 2 GEEQNPRLS(0.775)IS(0.225)LPS(0.034)Y(0.009)ES(0.433)LT(0.522)GLDET(0.001)TPTSTR 91.911 1.6346e-09 7081800.0 912.81 706.39 741.34 1087.0 1301.1 1079.8 771.54 1069.9 794.59 977.74 1094.7 True False 1005.4777992247938 765.9199643759205 791.6517904395679 1154.1415212438842 1209.7152245513264 1071.0064668065488 800.9013769028876 1048.5600051796866 761.1961455611574 916.0053295378474 960.0588398750501 1.0473085163776574 0.797784398793311 0.8245867415195093 1.2021570692418118 1.260042795615286 1.1155633616643104 0.8342211369119037 1.0921830638173748 0.7928640557699835 0.9541137391715114 1.0 9.90697901789455 -7.761400095854516 24.999996548276922 0.9123397442658738 1.0375863442449542 0.10282206802534344 0.15008153604284327 1.8509197551505794 1176600.5017075797 0.02592227270514399 0.03710439944525637 1.7322074581077656e-08 7.761400095854516 0.1252465999790804 GEEQNPRLS(ph)ISLPSYESLTGLDETTPTSTR ddPTM_A549_MK2206_60min_R1 2 GEEQNPRLSISLPSYESLTGLDETTPTSTR 30 1 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 GEEQNPRLS(0.932)IS(0.061)LPS(0.005)Y(0.002)ES(0.001)LTGLDETTPTSTR;GEEQNPRLS(0.971)IS(0.027)LPS(0.001)YESLTGLDETTPTSTR 58.257 0.00070422 17597700.0 1397.32 1369.02 1363.77 996.5500000000001 1790.25 1485.21 1239.8600000000001 1030.5 1954.7399999999998 1915.46 2365.8999999999996 True False 1633.15345480595 1438.6972704427967 1557.173092855802 1240.70479473683 1526.9065965298348 1642.3739363973912 1465.1265129922083 1176.5765307738923 1511.9945110783503 1482.7562556552555 1778.3817344818076 0.9183368357535595 0.8089923791654385 0.8756123967442444 0.6976594342374709 0.8585932743932232 0.9235215952529747 0.8238537793007209 0.6615995362304641 0.850208074994046 0.833767141725231 1.0 10.796349320490144 -10.193336903219086 0.901925621904992 0.9893370491698386 0.8229306840227876 0.03857812555514517 0.09052801631246031 0.39256400472395014 0.6296044063683118 0.03573218566625016 0.015125492599074416 6.407123522123382e-11 10.193336903219086 -0.16640636514705098 GEEQNPRLS(ph)ISLPSYESLTGLDETTPTSTR ddPTM_A549_PD325901_60min_R1 2 GEEQNPRLSISLPSYESLTGLDETTPTSTR 30 1 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 GEEQNPRLS(0.986)IS(0.014)LPSYESLTGLDETTPTSTR;GEEQNPRLS(0.949)IS(0.051)LPSYESLTGLDETTPTSTR 165.17 4.6481e-47 37630000.0 3372.3 3255.3 3770.7000000000003 3400.3 3484.0 4676.8 4215.4 3428.8999999999996 3656.3 4100.6 3948.6 True False 3714.6534134439526 3529.635555476345 4026.6023770611037 3610.3288083584016 3239.2958591475067 4638.713691388096 4375.819353755389 3360.507899579986 3502.6384261257526 3841.6874161872256 3462.9472322377146 1.072685537585737 1.019257678147044 1.1627674656940012 1.0425595789472804 0.9354158876554157 1.339527685609756 1.2636113288182527 0.970418454054371 1.0114616802469698 1.1093693199895436 1.0 11.757784688839164 GEES(ph)S(ph)EEEEKGYK ddPTM_A549_MK2206_60min_R1 2 GEESSEEEEKGYK 13 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 GEES(1)S(1)EEEEKGYK;GEES(1)S(1)EEEEKGYK 52.555 0.0069338 10020100.0 4360.4 3648.2 3408.7999999999997 3503.7 5100.5 4560.4 3271.98 4210.7 5467.6 5862.0 6186.4 True False 5096.328918455233 3833.877797277917 3892.219097741448 4362.1066572870695 4350.223206591493 5042.97850105148 3866.4564128048664 4807.57961972793 4229.19732996306 4537.770128664184 4650.146144045929 1.0959502692147856 0.8244639369424623 0.8370100588612823 0.9380579711182483 0.9355024706398833 1.0844774217491069 0.8314698706309472 1.0338555973952732 0.9094762183717916 0.9758338744846479 1.0 12.183060342383216 -6.690538558324219 3.34898424014977 0.9613128767621545 0.9077992940946207 0.044891137685872495 0.09040613562476403 0.5405883965076524 12.158836331686963 0.012326550403018936 0.026680245767903267 2.0392076029253052e-07 6.690538558324219 -0.05351358266753381 GEES(ph)S(ph)EEEEKGYK ddPTM_A549_PD325901_60min_R1 1 GEESSEEEEKGYK 13 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 GEES(1)S(1)EEEEKGYK 60.628 0.0023303 23132000.0 10929.0 9614.0 10857.0 11667.0 13388.0 10513.0 10287.0 12747.0 11044.0 12495.0 13768.0 True False 12038.504034495434 10424.205520335934 11593.821308444692 12387.644092320514 12447.673066092664 10427.385613574043 10678.477414262388 12492.751085171956 10579.859086544531 11706.06356758996 12074.62328254289 0.9970086646015965 0.8633151756715194 0.9601807888455347 1.025923857204736 1.0308953558898286 0.8635785456470205 0.8843735464361024 1.0346286416433035 0.8762061423349379 0.9694765040425084 1.0 13.559690558516479 -7.244240423881634 24.894172899152707 0.9383011402765509 0.9711883967884156 0.07588349370923919 0.06423710435469428 2275.0278822861865 3292929.7418585196 0.010468505676667978 0.018104086451940716 5.698487187187859e-08 7.244240423881634 0.03288725651186475 GEFS(ph)ASPMLK ddPTM_A549_PD325901_60min_R1 1 GEFSASPMLK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEFS(0.5)AS(0.5)PMLK 190.26 2.0135e-14 168540000.0 11214.0 10133.0 11116.0 10674.0 12467.0 10361.0 12081.0 10867.0 10151.0 11500.0 12157.0 True False 12352.437024689523 10986.943471766586 11870.398605938217 11333.308737587142 11591.36092881515 10276.623451178608 12540.749065976857 10650.249160003415 9724.388771053384 10773.888037397715 10661.766069572473 1.1585732555080197 1.0304993938220173 1.1133613820148474 1.0629860628748158 1.0871895756459746 0.9638762831710386 1.1762356240179381 0.9989197934475484 0.9120804853152553 1.010516265981977 1.0 13.38015881284155 -8.510766890936372 24.348792794459737 0.9583254823079544 1.0789726076844288 0.4074800234271586 0.05992274792561304 260.57506219027033 523841.9684472822 0.009518561639145247 0.011199989742422195 3.0848433062531997e-09 8.510766890936372 0.12064712537647437 GEFSAS(ph)PMLK ddPTM_A549_MK2206_60min_R1 8 GEFSASPMLK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEFS(0.005)AS(0.995)PMLK;GEFS(0.008)AS(0.992)PMLK;GEFS(0.034)AS(0.966)PMLK;GEFS(0.128)AS(0.872)PMLK;GEFS(0.016)AS(0.984)PMLK;GEFS(0.013)AS(0.987)PMLK;GEFS(0.012)AS(0.988)PMLK;GEFS(0.08)AS(0.92)PMLK 134.3 7.777899999999999e-07 718176000.0 34903.2 39558.2 39494.5 32892.5 45742.9 38027.0 35094.5 33554.5 53407.7 50463.299999999996 52575.899999999994 True False 40794.00685868883 41571.54341326662 45095.413974345705 40951.16397660045 39014.180005253205 42050.99189972033 41470.716379434 38310.953131346505 41310.94122457166 39063.605481716055 39519.85300897844 1.03224085498043 1.0519154361181977 1.1410825329765413 1.036217517491698 0.9872045828811572 1.0640472749270309 1.0493641352869494 0.9694103144220377 1.0453212266550258 0.9884552321801721 1.0 15.270289960489949 -6.506328598950502 24.764533052250652 1.0209649028762238 1.075410999779143 0.32539230442343214 0.0372684749981689 589.8640977015489 882632.2009387888 0.005039496218280717 0.011425360021927027 3.1165306404170717e-07 6.506328598950502 0.05444609690291924 GEFSAS(ph)PMLK ddPTM_A549_PD325901_60min_R1 6 GEFSASPMLK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEFS(0.002)AS(0.998)PMLK;GEFS(0.015)AS(0.985)PMLK;GEFS(0.086)AS(0.914)PMLK;GEFS(0.028)AS(0.972)PMLK;GEFS(0.2)AS(0.8)PMLK;GEFS(0.077)AS(0.923)PMLK 150.09 2.8254000000000003e-08 1084983800.0 60730.2 59899.0 63147.200000000004 63401.0 75799.7 68603.29999999999 69271.8 66707.9 67197.2 67137.6 74073.3 True False 66895.48519678968 64946.8989455588 67432.74872696123 67317.13577588185 70475.79056676895 68044.6174701516 71907.9762559835 65377.35860316474 64373.13536855764 62898.520478225466 64962.75368933634 1.0297513790239867 0.9997559410142408 1.0380217108627638 1.03624203028407 1.0848645810766728 1.047440473283403 1.106910840015503 1.0063821942618245 0.9909237480357073 0.96822435789926 1.0 15.987325167395028 -8.498644551861444 24.726535374270888 0.995868671579261 1.0481635259245368 0.4983295843813197 0.027849833182005103 455.06616297785223 464311.94127438933 0.004471806211939701 0.005391128281035224 3.1721626560912595e-09 8.498644551861444 0.05229485434527581 GEGDAPFSEPGT(ph)TSTQRPSSPETATK ddPTM_A549_MK2206_60min_R1 1 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFS(0.002)EPGT(0.17)T(0.17)S(0.17)T(0.17)QRPS(0.17)S(0.142)PET(0.007)AT(0.002)K 61.111999999999995 0.00020746 4020700.0 1722.6 1885.7 1632.9 1758.3 2522.6 1649.3 1471.2 1763.0 2343.4 2904.6 2782.5 True False 2013.3327664734863 1981.674075524085 1864.4697737332829 2189.0835789330854 2151.528881668013 1823.827831283266 1738.4979964787449 2012.9106489610608 1812.6236416408349 2248.448842667688 2091.52845690673 0.9626131357787543 0.9474765064659392 0.8914388745591079 1.0466429809760442 1.028687357593987 0.872007179850003 0.8312093439311363 0.9624113132737668 0.8666502411932842 1.0750266558615396 1.0 11.030341911790067 -7.263441909445724 24.979749022246587 0.9247960116241337 0.9731186054007023 0.06126363905634269 0.07416139444357438 343.3433808291116 4282883.520014145 0.010533085412442883 0.017361268503715003 5.452028162924743e-08 7.263441909445724 0.048322593776568556 GEGDAPFSEPGTTSTQRPS(ph)S(ph)PETATK ddPTM_A549_MK2206_60min_R1 1 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GEGDAPFS(0.041)EPGT(0.195)T(0.195)S(0.195)T(0.195)QRPS(0.516)S(0.507)PET(0.122)AT(0.033)K 41.138999999999996 0.023976 5968300.0 829.24 748.12 806.65 904.56 1630.5 694.92 758.0 1130.6 1346.6 1579.5 1468.2 True False 969.1954390284876 786.1961125211209 921.0450995051451 1126.1772406072407 1390.6556099102886 768.4559731494375 895.7187882890762 1290.8660123172865 1041.5972500783255 1222.689852989608 1103.605419741405 0.8782082995347992 0.7123887745181072 0.8345782677661757 1.0204527999428679 1.2601021932604723 0.6963140624386392 0.8116295663888272 1.1696807475082536 0.9438130979117435 1.1079049007172388 1.0 10.108008731473928 -6.141041345304295 4.900867539026313 0.9783564613301547 0.7912254769967162 0.2313358175108543 0.15306424337332272 0.2516769910215551 9.026936517678827 0.019894513057578587 0.05471046715012553 7.227009984105275e-07 6.141041345304295 -0.18713098433343855 GEGDAPFSEPGTTSTQRPS(ph)S(ph)PETATK ddPTM_A549_PD325901_60min_R1 1 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GEGDAPFS(0.21)EPGT(0.109)T(0.109)S(0.107)T(0.104)QRPS(0.64)S(0.702)PET(0.016)AT(0.002)K 63.724 0.00012039 18500000.0 3596.5 3691.6 3361.7 3486.8 4073.8 3007.9 3404.1 3518.8 3171.6 3680.8 3919.0 True False 3961.614032396635 4002.7040876713277 3589.8451775443045 3702.171716902648 3787.670341847047 2983.4046596660655 3533.644888294993 3448.614773554801 3038.3086815360957 3448.3936598307423 3436.9878445878517 1.1526412694868562 1.1645965213331484 1.0444742140118866 1.077155894726941 1.102031928280284 0.868028865555625 1.0281226027200954 1.0033828833538816 0.8840033246903835 1.0033185497763255 1.0 11.746929034078484 -6.643342261366627 0.7572551400308907 0.9486300204957684 1.1595752689319874 0.5403589917120527 0.06154626971166907 0.44158545484012723 0.429105769684289 0.011312971146263466 0.053225242752578325 2.273305164841188e-07 6.643342261366627 0.21094524843621898 GEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_A549_MK2206_60min_R1 1 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFSEPGT(0.073)T(0.073)S(0.073)T(0.073)QRPS(0.388)S(0.316)PET(0.003)ATK 76.16199999999999 1.7538e-06 2239100.0 372.46 546.61 340.68 410.6 531.3 486.66 521.12 392.69 812.28 493.12 602.26 True False 435.3221422272814 574.4301142399213 388.99354676676757 511.19701843253415 453.1464738088543 538.158038181237 615.8007585134608 448.3550100626878 628.2998769446176 381.7238495132862 452.70222046959447 0.9616081444789812 1.2688917532678694 0.8592702425078874 1.1292125271713096 1.000981336779835 1.188768276027005 1.3602777513984399 0.9903971966331484 1.3878877737619073 0.8432117896778121 1.0 8.822418572686114 -7.27542573924307 22.82322122109633 1.186478857097719 1.0509592576976934 0.0 0.18157787156768385 412.7525474112053 673537.0555860862 0.02581220596868219 0.04142402963377668 5.3036427277115e-08 7.27542573924307 -0.13551959940002556 GEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_A549_PD325901_60min_R1 1 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFS(0.002)EPGT(0.106)T(0.106)S(0.106)T(0.106)QRPS(0.3)S(0.262)PET(0.005)AT(0.006)K 44.615 0.010193 3991200.0 922.22 939.59 871.72 999.92 931.38 1038.8 1339.3 885.45 987.4 985.66 1007.3 True False 1015.843095497518 1018.7725467913913 930.8801612781987 1061.682787416913 865.9630818865687 1030.340357213042 1390.26779439308 867.7890051279123 945.9030117759942 923.4252593862118 883.4084858008026 1.1499132188849923 1.1532292967141722 1.0537369475621048 1.2018027950620218 0.980252166246264 1.1663238170947008 1.573754176849245 0.9823190733121254 1.0707425013226364 1.0452981539441908 1.0 9.786936880386815 GEGDAPFSEPGTTSTQRPSS(ph)PETATK ddPTM_A549_MK2206_60min_R1 2 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFSEPGTTSTQRPS(0.007)S(0.958)PET(0.03)AT(0.005)K;GEGDAPFSEPGTTSTQRPS(0.045)S(0.954)PET(0.001)ATK 344.27 1.4833999999999993e-256 973940000.0 28268.0 30034.0 27534.0 25722.0 40872.0 29858.0 28059.0 28907.0 42526.0 39390.0 42174.0 True False 33038.94731375393 31562.60231441394 31438.735225655102 32023.891154704448 34859.78294281101 33017.55374186367 33156.95709842106 33004.65577397467 32893.928900067505 30491.771642456904 31701.031856813803 1.0422041611447597 0.9956332796034805 0.991725927649818 1.010184504382978 1.099641901256229 1.0415293070268592 1.0459267461129762 1.0411224443118772 1.0376295966844784 0.9618542317543843 1.0 14.952242179866193 -4.893429951232791 18.962049169435105 1.0245847437838083 2.8909289304375414 0.022446765328344997 0.03501249472075215 1110.4444076618622 209673.963417915 0.00429722324050592 5485.403868845675 1.2781153443158978e-05 4.893429951232791 1.8663441866537331 GEGDAPFSEPGTTSTQRPSS(ph)PETATK ddPTM_A549_PD325901_60min_R1 2 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFSEPGTTSTQRPS(0.029)S(0.971)PETATK;GEGDAPFSEPGTTSTQRPS(0.028)S(0.972)PETATK 365.67 1.0264999999999996e-282 1142720000.0 39441.0 40081.0 45498.0 44348.0 51767.0 42241.0 46466.0 45659.0 43559.0 49763.0 49585.0 True False 43445.021285070405 43458.76653428172 48585.76788169994 47087.27523838438 48131.06450645492 41897.00330095891 48234.28905717084 44748.29542620745 41728.36671050283 46620.95568739329 43486.35934521273 0.9990494016798654 0.9993654835367576 1.1172645540640915 1.0828056417550638 1.1068083240625086 0.9634516186642148 1.1091820465876916 1.0290191246173759 0.9595736994041228 1.072082289466838 1.0 15.40827531174846 -8.58486260158613 5.6261690585928585 0.9811739707310361 1.0550021249066177 0.04136810329564222 0.05558831521102058 0.17286398819193882 10.830904061612879 0.008170427561639633 0.00929504866570459 2.6009823097893676e-09 8.58486260158613 0.07382815417558164 GEGDIHENVDTDLPGS(ph)LGQSEEKPVPAAPVPSPVAPAPVPSR ddPTM_A549_MK2206_60min_R1 2 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR 42 1 Q9UK76;Q9UK76-3 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GEGDIHENVDT(0.003)DLPGS(0.803)LGQS(0.193)EEKPVPAAPVPSPVAPAPVPSR;GEGDIHENVDT(0.007)DLPGS(0.949)LGQS(0.043)EEKPVPAAPVPSPVAPAPVPSR 107.47 1.4118e-15 19935200.0 1506.27 1188.08 1194.81 1593.17 2081.73 1718.06 1541.15 1464.63 2158.51 2424.8999999999996 2214.11 True False 1760.4915512341904 1248.5481973000237 1364.252024223322 1983.4967215201182 1775.510274651057 1899.8639688440705 1821.1570060312786 1672.2457877412583 1669.6109314321745 1877.113405833809 1664.28538067269 1.0578062943283288 0.750200783951711 0.8197224106312241 1.1918008441066794 1.066830421795456 1.1415493946574005 1.094257647865165 1.0047830781673697 1.00319990238533 1.127879525730795 1.0 10.700687123177124 -6.232867024708835 24.997217356657753 1.033262205771846 0.8633389026233271 0.4069814637285122 0.09816577939690369 572.4455056263356 500817.355478166 0.013072720453570464 0.03457988290000384 5.849691666360069e-07 6.232867024708835 -0.16992330314851878 GEGDIHENVDTDLPGS(ph)LGQSEEKPVPAAPVPSPVAPAPVPSR ddPTM_A549_PD325901_60min_R1 4 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR 42 1 Q9UK76;Q9UK76-3 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GEGDIHENVDT(0.011)DLPGS(0.494)LGQS(0.494)EEKPVPAAPVPS(0.002)PVAPAPVPSR;GEGDIHENVDT(0.005)DLPGS(0.497)LGQS(0.497)EEKPVPAAPVPS(0.002)PVAPAPVPSR;GEGDIHENVDT(0.026)DLPGS(0.486)LGQS(0.486)EEKPVPAAPVPS(0.002)PVAPAPVPSR;GEGDIHENVDT(0.007)DLPGS(0.495)LGQS(0.495)EEKPVPAAPVPS(0.002)PVAPAPVPSR 77.439 3.3510999999999993e-07 44852500.0 2490.7699999999995 3159.9500000000003 3120.4 2962.78 3707.16 3410.0800000000004 3287.99 3345.3100000000004 2901.0699999999997 3715.52 3316.0 True False 2743.6311367920384 3426.2500763454896 3332.1691084895283 3145.7841916384164 3446.78187060771 3382.3094390884207 3413.1162587071635 3278.5851677050728 2779.1481166426797 3480.921433105391 2908.1530218559124 0.9434273630625942 1.1781532988793486 1.1458025363338753 1.0817120584771889 1.1852133793180037 1.1630438335496918 1.1736370930471176 1.127377116357089 0.9556402623095449 1.1969526386489635 1.0 11.505887467972025 -8.755218599262298 24.918700375484658 0.979052343653876 1.1307554262568233 0.0 0.0925870409434408 76.28135681120845 305561.22681180126 0.010537440230679547 0.011802734066285502 1.757038997356787e-09 8.755218599262298 0.1517030826029474 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(ph)PVAPAPVPSR ddPTM_A549_MK2206_60min_R1 2 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR 42 1 Q9UK76;Q9UK76-3 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR 207.92 1.936e-117 286000000.0 3204.5 3252.0 3489.0 3255.9 4383.9 4030.4 3783.6000000000004 3854.3 5183.200000000001 5126.0 4219.6 True False 3745.3412574969752 3417.5129095849393 3983.79266369981 4053.5956461629057 3739.034117317212 4456.8942528370035 4471.031144288319 4400.658828298703 4009.2134758695847 3968.0330398383876 3171.756864964469 1.1808412236348802 1.0774826240104074 1.2560208216793558 1.278028492959001 1.1788526915852038 1.4051815579145694 1.409638674917286 1.3874515026384282 1.2640355634303946 1.2510520852558598 1.0 11.631066468328811 -10.434708347380777 0.9110061375083729 1.009385268080497 1.2709407463192945 0.05923606683731231 0.12101809178920842 0.38167279773340057 0.5975763581143715 0.060082362164920064 0.020371447010417924 3.675290335917548e-11 10.434708347380777 0.26155547823879766 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(ph)PVAPAPVPSR ddPTM_A549_PD325901_60min_R1 3 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR 42 1 Q9UK76;Q9UK76-3 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQS(0.001)EEKPVPAAPVPS(0.996)PVAPAPVPS(0.002)R;GEGDIHENVDT(0.002)DLPGS(0.086)LGQS(0.086)EEKPVPAAPVPS(0.81)PVAPAPVPS(0.017)R 131.68 1.3502e-30 508813800.0 4028.3099999999995 4802.4800000000005 3450.1 4431.61 4634.570000000001 4721.639999999999 4412.22 4515.16 4030.75 4841.04 5066.52 True False 4437.261065714916 5207.201843905025 3684.244533136688 4705.340484783452 4309.053791598526 4683.188529294753 4580.129446559427 4425.101591725504 3861.351594810701 4535.3759082229435 4443.37015931647 0.9986251216120844 1.1719036805851117 0.8291554385609505 1.0589575741102069 0.9697715106097292 1.0539721790847096 1.0307782791753717 0.9958885785032646 0.8690141618551759 1.020706298509379 1.0 12.117438616144096 -8.542011785316609 23.9770696238465 0.9378458634272686 1.0160685294956093 0.04687575244881326 0.08561441541365267 208.30456557533938 261040.77584281575 0.014110363630219735 0.016001027552985464 2.8707026795865333e-09 8.542011785316609 0.07822266606834072 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(ph)PVAPAPVPSRR ddPTM_A549_MK2206_60min_R1 1 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSRR 43 2 Q9UK76;Q9UK76-3 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(0.958)PVAPAPVPS(0.042)RR 142.85 5.955399999999999e-41 14917000.0 1538.3 1548.1 1341.6 1572.0 2409.1 1860.1 2009.5 1882.0 2606.2 2022.4 3127.8 True False 1797.9274321758764 1626.8916775302725 1531.859053488009 1957.1400705697613 2054.724581315472 2056.9345473655508 2374.600138610683 2148.7792633832755 2015.8998612462008 1565.538435382199 2351.080937111544 0.7647237505930985 0.6919760404033624 0.6515552184137046 0.83244266059774 0.8739488925633649 0.8748888712834484 1.0100035694764444 0.9139537603597735 0.8574353308835319 0.665880281138073 1.0 11.199108489990552 -6.635295196947823 1.7053243636881463 0.9315759598278134 0.701097863304183 0.35287032412136077 0.09553468627135588 0.15085039928271635 0.8784392418559103 0.009575823568781904 0.025419646878663535 2.3158200147474886e-07 6.635295196947823 -0.23047809652363038 GEGERPAQNEK ddPTM_A549_PD325901_60min_R1 1 GEGERPAQNEK 11 1 A0A087X0X3;P52272-2;P52272;M0R019;M0R2T0;M0QYQ7;M0R0N3;M0R0Y6 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 49.423 0.028719 8092800.0 2032.4 1723.7 1680.6 1781.8 2101.3 1974.2 1742.6 2041.8 2151.5 2232.7 2577.1 False True 2238.727751826197 1868.9622483256755 1794.655622268779 1891.8577392385953 1953.7119370914618 1958.122769743925 1808.915596587308 2001.0746972388858 2061.0799370427903 2091.726940965035 2260.133037582894 0.9905291921312789 0.8269257681947975 0.7940486654662059 0.8370559200629394 0.8644234231365712 0.8663750041183617 0.8003580172085172 0.8853791630686224 0.9119285912686885 0.9254884142581441 1.0 11.14219198075925 -9.51151504091605 0.6823752661999926 0.9905302619617862 0.8501612185822948 0.3366959104822361 0.05408374187175204 0.34019994956255356 0.34552305515286413 0.0197805632913532 0.011916659629232502 3.079533686198974e-10 9.51151504091605 -0.1403690433794914 GEGES(ph)PQAR ddPTM_A549_MK2206_60min_R1 2 GEGESPQAR 9 0 P18206;P18206-2 P18206 VCL Vinculin 1 GEGES(1)PQAR;GEGES(1)PQAR 96.34200000000001 0.00089404 26103000.0 1558.39 1239.1599999999999 1168.81 988.52 280.39 93.60600000000001 121.11 251.64999999999998 446.61 1563.6399999999999 1883.1399999999999 True False 1821.4081330225335 1302.227951119703 1334.5648332642513 1230.707444376349 239.14500243038697 103.51132478936601 143.11411932676776 287.32215814580303 345.45354808961935 1210.412638004857 1415.5043659799962 1.2867555740540002 0.919974521038041 0.9428192984345138 0.8694480030969691 0.16894684903696477 0.07312681421346377 0.10110468237777957 0.20298217727282053 0.24404979341088182 0.85511049424906 1.0 10.467100483759491 -6.580286199415493 6.8549563282853825 0.4887130022953597 1.0163059246693147 0.4708292480779055 0.309053344026451 0.21644754219065826 20.509642384055148 0.05756136163305847 0.12078097571034327 2.628535220223454e-07 6.580286199415493 0.527592922373955 GEGES(ph)PQAR ddPTM_A549_PD325901_60min_R1 2 GEGESPQAR 9 0 P18206;P18206-2 P18206 VCL Vinculin 1 GEGES(1)PQAR;GEGES(1)PQAR 102.52 0.00068876 73889000.0 2424.3999999999996 2475.8 2365.8 2543.2 2985.0 2775.5 2690.7 2857.5 3020.3 3321.3999999999996 3065.7 True False 2670.5233032510505 2684.444354820856 2526.3574147111026 2700.287687973731 2775.3438976909606 2752.897248214093 2793.0960609075346 2800.5049208346168 2893.3672943761744 3111.686237166329 2688.638335073483 0.9932623768745239 0.9984401099255648 0.9396419673686066 1.0043328077072624 1.0322488753829018 1.023900169949356 1.038851534797891 1.0416071526995005 1.0761459645323013 1.157346526148257 1.0 11.392659987330019 -6.615445647700373 3.5395244719805996 1.0362891795632256 0.9782377405291589 0.3480905917455951 0.04259741011402839 0.1715288821787806 4.211526587083771 0.00432050887499895 0.009539837719186506 2.4241213262821555e-07 6.615445647700373 -0.05805143903406673 GEGGEFS(ph)VDRPIIDRPIR ddPTM_A549_PD325901_60min_R1 1 GEGGEFSVDRPIIDRPIR 18 2 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GEGGEFS(1)VDRPIIDRPIR 76.704 8.945e-05 4278100.0 320.57 169.96 406.46 380.59 485.16 391.99 305.86 379.49 350.7 352.41 323.98 True False 353.114030408839 184.2831256746719 434.04481984253704 404.09817991739624 451.084035311138 388.7977634038705 317.49966967301424 371.9207742458543 335.9612985921015 330.1587724573334 284.13251387843144 1.2427793834250238 0.6485816183413597 1.5276140485219052 1.4222173112166008 1.5875833045426762 1.368367731298154 1.1174351901481405 1.3089694282752302 1.1824106083679162 1.1619887071375248 1.0 8.15042012136273 -9.666415819597692 0.7204281970760945 1.019016602188705 1.2819564372742316 0.080525878290718 0.24003840519705552 0.8648223354740459 0.9583314093162743 0.09999332123063982 0.055226901626050866 2.1556794438941093e-10 9.666415819597692 0.26293983508552654 GEGIRT(ph)PLEKEEAENQEEKPEK ddPTM_A549_MK2206_60min_R1 1 GEGIRTPLEKEEAENQEEKPEK 22 3 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 GEGIRT(1)PLEKEEAENQEEKPEK 46.678000000000004 0.003478 4364200.0 1820.2 1989.3 2006.1 1518.3 2934.9 1914.2 1660.6 1795.3 3413.4 2930.3 2456.7 True False 2127.405260382584 2090.546873012706 2290.595145499624 1890.2835681590764 2503.1800978385204 2116.7593734568773 1962.3095248454333 2049.7892728756624 2640.270350079725 2268.3431948182656 1846.6335885292938 1.1520451450668694 1.1320853719971977 1.2404167018991095 1.0236375964895919 1.3555369692111563 1.1462801210838576 1.0626415207839184 1.1100140740471243 1.429774897673395 1.2283666932674133 1.0 10.850681917927222 GEGIRT(ph)PLEKEEAENQEEKPEK ddPTM_A549_PD325901_60min_R1 1 GEGIRTPLEKEEAENQEEKPEK 22 3 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 GEGIRT(1)PLEKEEAENQEEKPEK 54.223 0.0017064 5747400.0 1158.2 1456.6 1764.3 1320.7 1657.9 1578.9 1539.9 1287.8 1612.1 1744.2 1775.5 True False 1275.779611378224 1579.3527939381438 1884.0360075977678 1402.2766394726752 1541.4548234445042 1566.0419618826274 1598.5017371656133 1262.1138187404435 1544.3490432287617 1634.0709143329655 1557.1247558218242 0.8193175316289214 1.0142750528069204 1.2099454462808314 0.9005550995383008 0.9899366236913691 1.0057267126654197 1.0265726822395493 0.8105412325002316 0.9917953185540874 1.0494155386223567 1.0 10.604668821497246 GEGPAIPGDT(ph)PPPTPR ddPTM_A549_MK2206_60min_R1 2 GEGPAIPGDTPPPTPR 16 0 O75145-2;O75145 O75145-2 PPFIA3 Liprin-alpha-3 1 GEGPAIPGDT(0.999)PPPT(0.001)PR;GEGPAIPGDT(0.844)PPPT(0.156)PR 134.81 2.7708e-10 11383500.0 4162.8 5365.0 4131.4 4418.0 5030.9 4321.0 4179.1 4691.6 7286.7 6001.9 6759.6 True False 4865.378869311406 5638.055584232227 4717.294643396216 5500.410198331559 4290.861274392932 4778.245351952335 4938.3883748534 5356.648667422413 5636.274084468835 4646.066621499418 5081.004764530721 0.9575623513041065 1.109633988850029 0.9284176776070988 1.082543798566891 0.8444907008051651 0.9404134759542291 0.9719314591726242 1.0542498808141052 1.109283369268676 0.9143991861476882 1.0 12.310898101634088 -8.263579066879274 23.481471671157532 1.0532462599465078 0.9773261517738072 0.0020215811507128256 0.0829296024634037 105.33822924813371 1156012.8944970765 0.012213933948687835 0.015136238158282717 5.450306593454301e-09 8.263579066879274 -0.07592010817270056 GEGPAIPGDT(ph)PPPTPR ddPTM_A549_PD325901_60min_R1 1 GEGPAIPGDTPPPTPR 16 0 O75145-2;O75145 O75145-2 PPFIA3 Liprin-alpha-3 1 GEGPAIPGDT(0.998)PPPT(0.002)PR 106.33 8.6036e-07 10645000.0 3738.2 4054.0 3297.2 4128.2 4660.0 4212.7 4221.4 4913.6 5754.0 5080.0 5333.2 True False 4117.699312082606 4395.644807514235 3520.967819674296 4383.189538177555 4332.697676127264 4178.3931679162315 4382.047687038715 4815.594393355372 5512.179390074001 4759.247933041779 4677.250209940273 0.8803675508595868 0.9397925298442322 0.7527858595615431 0.9371295828609364 0.9263343805980803 0.8933439479111357 0.9368854541341016 1.0295781019200307 1.178508555808989 1.0175311816603785 1.0 12.191444892590333 -8.248913805591362 2.6111186222565923 1.0847092561124743 0.889862967451431 0.5898928001295884 0.06502203000421207 0.15418073034536703 2.084817720094572 0.013055626544604083 0.01671661749886014 5.637495320708718e-09 8.248913805591362 -0.19484628866104325 GEGPGEAGGPLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 GEGPGEAGGPLTPR 14 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 GEGPGEAGGPLT(1)PR;GEGPGEAGGPLT(1)PR 178.84 3.1753e-23 258670000.0 5439.1 5056.9 4442.5 4374.1 5220.3 4090.1000000000004 3507.4 4019.0 5739.1 5724.2 5434.2 True False 6357.087106772288 5314.274610233727 5072.513301371855 5445.754696360813 4452.400785289595 4522.911667211352 4144.64917947903 4588.705557671301 4439.203013459471 4431.099244370445 4084.7381637098124 1.556302228439215 1.3010074078792933 1.2418209192544505 1.3331955386376364 1.0900088590368462 1.107270891288558 1.0146670394448993 1.12337813924988 1.0867778632419682 1.084793949276314 1.0 11.996027887629321 -2.0000000000035913 0.30548666111702377 1.026007686645393 5.4690510584039425 0.8456258152900984 0.0624019832736098 11.615025207194181 0.14526471170211963 0.01915613824592288 28.85886320387784 0.009999999999917306 2.0000000000035913 4.44304337175855 GEGPGEAGGPLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GEGPGEAGGPLTPR 14 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 GEGPGEAGGPLT(1)PR;GEGPGEAGGPLT(1)PR 144.27 5.254899999999999e-13 144523000.0 2563.9 2488.3 2619.1000000000004 2614.8 3212.3999999999996 2507.8 2780.3 2992.8999999999996 4287.9 5736.9 5698.1 True False 2824.185240556579 2697.9977736896108 2796.84787592774 2776.310257358333 2986.772106178372 2487.3773082584403 2886.105837938538 2933.2042616153717 4107.694474573913 5374.671154934521 4997.26982323196 0.565145637609388 0.53989435614359 0.5596751776190648 0.5555654098266737 0.5976807760695803 0.49774724924693803 0.5775365229472367 0.5869613539735455 0.8219877292751988 1.0755215037515182 1.0 12.286924401901238 -9.004583097088885 1.0134852373822312 0.9548046831167633 0.5470308372856839 0.9195536973561564 0.05408469335450159 0.07453044662139933 0.15749404458661062 0.01110232254344844 0.01038677359543703 9.89502516205625e-10 9.004583097088885 -0.40777384583107934 down GEGPGEAGGPLT(ph)PRR ddPTM_A549_MK2206_60min_R1 2 GEGPGEAGGPLTPRR 15 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 GEGPGEAGGPLT(1)PRR;GEGPGEAGGPLT(1)PRR 153.75 2.3675999999999997e-15 19283900.0 1595.49 1646.66 1577.3400000000001 1310.96 920.1099999999999 955.75 957.96 548.36 1207.0500000000002 2138.3 2210.1000000000004 True False 1864.7697060146195 1730.4679605464764 1801.0305302838233 1632.1452588512311 784.7630378623461 1056.8868306244963 1132.008931964912 626.0917092820686 933.6551022627681 1655.256544886153 1661.2711743430586 1.1224956736831562 1.0416529145103486 1.084127960623907 0.982467693449659 0.4723870792332725 0.636191638636261 0.68141128880573 0.3768750815348695 0.5620124617114225 0.9963795017033965 1.0 10.698071872681245 -6.577035658324853 8.7088329374661 0.717574897117696 1.0712613710016163 0.49838986678883235 0.1832840564179593 0.24146699059913201 35.78016892283542 0.03144733745549339 0.06562560034797099 2.6482826889147257e-07 6.577035658324853 0.3536864738839204 GEGPGEAGGPLT(ph)PRR ddPTM_A549_PD325901_60min_R1 2 GEGPGEAGGPLTPRR 15 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 GEGPGEAGGPLT(1)PRR;GEGPGEAGGPLT(1)PRR 106.93 2.736e-06 11352600.0 950.4 962.9200000000001 824.78 1358.35 1339.24 1287.9299999999998 1115.52 1474.13 1527.3400000000001 2317.6 1926.3899999999999 True False 1046.8839083524986 1044.0686477680345 880.7545306050478 1442.2521944633208 1245.176402527183 1277.4415250918303 1157.971724035966 1444.7273207173873 1463.151211267922 2171.2663404759105 1689.4562423923442 0.619657308714942 0.617990937894661 0.521324263100097 0.8536783364220363 0.7370279095029763 0.7561258427640108 0.6854109002528691 0.8551433795477236 0.8660485986876083 1.28518649136559 1.0 10.722343269256083 -5.985064113254337 0.11489491512339972 1.1754991141056483 0.13553109929499624 0.6889400101582344 0.11255775251827102 9.409158253088197 0.21551093214657327 0.4734111517385539 1.725546212126006 1.034989363829416e-06 5.985064113254337 -1.039968014810652 GEGQLGPAER ddPTM_A549_MK2206_60min_R1 1 GEGQLGPAER 10 0 P13639 P13639 EEF2 Elongation factor 2 0 112.36 0.00037726 6262600.0 2619.9 3336.5 2973.9 3050.6 3234.5 2925.5 2165.8 2647.3 3859.0 4755.2 4988.9 False True 3062.075069594732 3506.3135986562597 3395.643738199161 3797.99713694664 2758.70933471624 3235.074468210265 2559.2978254307127 3022.5628820162306 2984.9426615567068 3680.99701737017 3750.0184433645945 0.8165493359140321 0.9350123610353026 0.9055005433926663 1.0127942553634477 0.7356522044838447 0.8626822819857091 0.6824760635402255 0.8060128043808564 0.7959807949313855 0.9815943769245846 1.0 11.872681975759994 -4.341773505730294 20.100999874060566 0.8755562407828714 0.8638210484092941 0.0 0.10516890684986968 0.0 0.0 0.01492504039526383 0.0 4.552254084687231e-05 4.341773505730294 -0.011735192373577341 GEGQLGPAER ddPTM_A549_PD325901_60min_R1 1 GEGQLGPAER 10 0 P13639 P13639 EEF2 Elongation factor 2 0 96.171 0.0015011 8606500.0 5028.2 4967.2 4794.3 4556.4 5622.2 5308.9 5459.5 4903.4 6427.7 5821.5 6207.1 False True 5538.659162434802 5385.803376389916 5119.670028467935 4837.8384796648 5227.316067537057 5265.666078560185 5667.2642600530335 4805.597840357114 6157.566121928863 5453.9294964965975 5443.666050048804 1.017450209383279 0.9893706422975065 0.9404820173386711 0.8887096370692003 0.9602565659754593 0.9673014527614119 1.0410749314797194 0.882787040236245 1.1311432526015548 1.0018853923722417 1.0 12.41036284990293 -8.764792506498654 24.99991716591618 1.0619287543782863 0.9616497596624823 0.2926321528632534 0.0559570424058665 70.96219187722434 529072.2517717221 0.010827144197356269 0.011757938396414053 1.7187293508277012e-09 8.764792506498654 -0.10027899471580393 GEGS(ph)DSKESPK ddPTM_A549_PD325901_60min_R1 1 GEGSDSKESPK 11 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 GEGS(0.977)DS(0.023)KESPK 98.943 7.6613e-05 53179000.0 15178.0 15222.0 12612.0 12832.0 12792.0 10434.0 8447.7 10207.0 11188.0 14256.0 16714.0 True False 16718.85938654695 16504.811361613636 13467.926162117019 13624.603496413543 11893.53405000428 10349.028963381672 8769.181846258816 10003.413377763405 10717.807267318029 13355.873727055825 14658.283958775539 1.1405741240629874 1.125971594494363 0.9187928273182426 0.9294814819204564 0.8113865226961937 0.706019135151627 0.5982406856710489 0.6824409600671311 0.7311774896338771 0.911148519473182 1.0 13.839428596999687 -5.903795752529507 1.3972464619472544 0.8204233057642478 1.170715803297861 0.5672692281841121 0.1125229103347134 0.4174377958247613 1.3566822791757085 0.02176242910325094 0.14655017796757216 1.2479702931625374e-06 5.903795752529507 0.35029249753361325 GEGS(ph)PSEATR ddPTM_A549_MK2206_60min_R1 1 GEGSPSEATR 10 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 GEGS(0.498)PS(0.498)EAT(0.003)R 55.401 0.019518 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GEGS(ph)PSEATR ddPTM_A549_PD325901_60min_R1 2 GEGSPSEATR 10 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 GEGS(0.805)PS(0.186)EAT(0.009)R;GEGS(0.813)PS(0.18)EAT(0.007)R 69.979 0.0025017 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GEGSDSKES(ph)PK ddPTM_A549_PD325901_60min_R1 2 GEGSDSKESPK 11 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 GEGS(0.073)DS(0.045)KES(0.882)PK;GEGS(0.001)DS(0.002)KES(0.998)PK 84.75299999999999 0.00013675 62770000.0 20342.6 20687.7 16557.0 16543.800000000003 18575.5 13552.099999999999 10320.8 13321.0 15059.5 20938.0 24347.0 True False 22407.76577656937 22431.125082489456 17680.657585329158 17565.672952304114 17270.820961996116 13441.73619078444 10713.563691758458 13055.302204877658 14426.601585821933 19615.971106698566 21352.473348349173 1.0494224912966246 1.050516477250336 0.8280379184595075 0.8226528452106543 0.8088440472556018 0.6295165890851546 0.5017481355426563 0.6114187331786088 0.6756407724043499 0.9186744217720866 1.0 14.382115572614174 -5.80966488647936 3.3393012082414097 0.7836351662945114 1.0585313103775233 0.391477480854203 0.13887548959456858 0.24923840401093522 5.5652542371260925 0.024852901824088332 0.09836346471390119 1.55001218945687e-06 5.80966488647936 0.274896144083012 GEGSDSKES(ph)PKTK ddPTM_A549_PD325901_60min_R1 4 GEGSDSKESPKTK 13 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 GEGS(0.002)DS(0.008)KES(0.981)PKT(0.01)K;GEGS(0.002)DS(0.02)KES(0.803)PKT(0.175)K;GEGS(0.169)DS(0.143)KES(0.675)PKT(0.012)K;GEGSDS(0.003)KES(0.993)PKT(0.003)K 89.35799999999999 3.8653000000000004e-05 161669100.0 32960.299999999996 29197.1 23423.600000000002 24193.1 25340.2 20410.8 15173.82 19968.0 22145.399999999998 29439.7 33908.8 True False 36306.40539190957 31657.642084231364 25013.266353549316 25687.45284048338 23560.391770944214 20244.581211979177 15751.268023532912 19569.722575407042 21214.705850702943 27580.872317789363 29738.23256559341 1.2208662808668533 1.0645434968068235 0.8411147602123875 0.8637854581244782 0.7922593153099204 0.680759395075879 0.529663892727668 0.6580660949584762 0.7133815301198487 0.9274549944067599 1.0 14.860031285694816 -5.559210575594975 1.665193546784402 0.8040248598997635 1.2656105848424966 0.5581732194894854 0.12708995384867602 0.4397340857671754 1.752639227519862 0.02323700532998506 0.26958415369227356 2.7592396641822566e-06 5.559210575594975 0.4615857249427331 GEGSPS(ph)EATR ddPTM_A549_MK2206_60min_R1 1 GEGSPSEATR 10 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 GEGS(0.361)PS(0.638)EAT(0.001)R 63.073 0.0067194 2847400.0 368.72 512.83 615.02 403.51 582.18 415.18 374.66 299.68 443.03 840.71 742.99 True False 430.95092166150243 538.9308565259673 702.2390839864306 502.369968114252 496.54209320918284 459.11407202582086 442.73087232240806 342.16055773150924 342.6844123735341 650.7930271015472 558.4850775191843 0.7716426794710536 0.9649870304859752 1.2573999060204224 0.8995226342408321 0.889087485407569 0.8220704375222094 0.7927353659815557 0.612658370840277 0.6135963630322113 1.1652827502435676 1.0 9.12537492280796 -6.90393960298719 2.041285703276709 0.7946012930158775 0.997746075835322 0.09287803522380267 0.1838725865870969 0.41491649845350137 3.496388956746038 0.027699789578139355 0.0593643025103271 1.2475569990098175e-07 6.90393960298719 0.2031447828194446 GEGT(ph)EPR ddPTM_A549_PD325901_60min_R1 1 GEGTEPR 7 0 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 GEGT(1)EPR 50.607 0.05487 1736300.0 309.03 284.51 277.8 222.68 241.78 272.3 249.58 177.12 217.33 313.24 381.73 True False 340.402498104138 308.4866561879317 296.65317854710634 236.43443785702684 224.79820689571875 270.08247908077715 259.07790347541635 173.587202652048 208.1963758854332 293.46197294212726 334.7796299858438 1.0167957295326837 0.921461847009557 0.8861147811163133 0.7062390201788098 0.6714811379211584 0.8067470505663609 0.7738759478477573 0.5185118421314587 0.6218908118580476 0.8765825237172773 1.0 8.3870679380559 -5.85824587416707 2.234604532778896 0.7753700033605468 0.9879952227836986 0.31839060661280627 0.1249673087515078 0.42991239276579946 4.142563466771104 0.023668908342673694 0.11197455682204616 1.3859709445409506e-06 5.85824587416707 0.2126252194231517 GEIIGVK ddPTM_A549_PD325901_60min_R1 1 GEIIGVK 7 0 Q15181;Q5SQT6 Q15181 PPA1 Inorganic pyrophosphatase 0 83.61399999999999 0.039969 2133500.0 2139.8 2501.3 2065.5 2626.4 2594.6 2845.3 2528.3 2407.1 2924.5 2556.9 2847.1 False True 2357.0309207624964 2712.0933293131134 2205.6772508605036 2788.626763012822 2412.364246884076 2822.128820156209 2624.515840038846 2359.088502166581 2801.5934352227014 2395.4568976367163 2496.9247492539093 0.9439735504511244 1.0861734339905507 0.8833575186915699 1.1168245113698658 0.9661341406483713 1.1302418388858022 1.0510992935702452 0.9447975966722607 1.1220175682346167 0.9593628716093618 1.0 11.285936627548514 -6.280431072258286 24.995449997813765 1.0520693053871495 0.982668668548249 0.0924715883483257 0.07831690392557171 1119.4971488664055 1473397.4214952346 0.010243306950275964 0.02383460382391538 5.242868050080018e-07 6.280431072258286 -0.06940063683890052 GEIKDSS(ph)PSSSPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GEIKDSSPSSSPSPK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 2 GEIKDS(0.143)S(0.761)PS(0.1)S(0.086)S(0.298)PS(0.613)PK 96.848 4.6807e-06 14818000.0 4990.0 5937.3 5623.2 5168.9 7475.3 5572.9 5563.5 4806.3 8126.2 9125.7 8904.3 True False 5832.190006213109 6239.483209741286 6420.654315424703 6435.280732040741 6375.693272470031 6162.62057900837 6574.315934889545 5487.607743676428 6285.628674874865 7064.198031926095 6693.1165638219545 0.8713713485489886 0.9322238975288918 0.9592921704262584 0.9614774628048638 0.9525746655799064 0.9207400648479583 0.9822503272131016 0.8198882674983404 0.9391183636111063 1.0554422539284514 1.0 12.70846242440733 -10.198890505083407 1.0135269221538081 0.9943006286428343 0.9292616894131017 0.3625160394561312 0.04754349395163264 0.4792141904033027 0.9773544885608181 0.017463574351718116 0.00801077015741828 6.325713160153564e-11 10.198890505083407 -0.06503893922973258 GEIKDSS(ph)PSSSPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 GEIKDSSPSSSPSPK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 2 GEIKDS(0.092)S(0.585)PS(0.321)S(0.003)S(0.034)PS(0.965)PK 98.26899999999999 3.6511e-06 20845000.0 6424.2 6538.6 6482.9 7283.3 8104.1 7600.5 7180.2 7455.8 7175.4 7572.8 8314.6 True False 7076.380054753914 7089.630769218696 6922.868578844618 7733.1728994255645 7534.895973627243 7538.6040479377425 7453.446440156203 7307.088220038048 6873.842891125652 7094.652115617869 7291.956910592029 0.9704363508340298 0.9722535193427375 0.9493841864025161 1.0605072128433235 1.033316031075599 1.0338245467396334 1.022146253954079 1.0020750684118882 0.9426609311337208 0.9729421337244104 1.0 12.832090320935066 -8.557285790162656 22.173354000766054 0.9728939443944205 1.007111118629467 0.17037013780861165 0.03305473152642742 78.23839519593565 50419.34281250174 0.006463304211648145 0.007328741991648494 2.7714957045951203e-09 8.557285790162656 0.034217174235046555 GEIKDSS(ph)PSSSPSPK ddPTM_A549_PD325901_60min_R1 1 GEIKDSSPSSSPSPK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 GEIKDS(0.247)S(0.745)PS(0.006)S(0.002)SPSPK 92.47399999999999 7.5215e-06 9776200.0 3363.8 3608.3 3351.5 3046.9 4670.9 4020.4 3687.1 4001.9 4308.7 4303.3 4651.2 True False 3705.290499701321 3912.3841043299535 3578.9529442067223 3235.1000929880324 4342.832097730219 3987.659195359374 3827.4146081585354 3922.078965070186 4127.620322907865 4031.588903594227 4079.131886386073 0.9083527090819419 0.9591217477883878 0.8773810320159845 0.793085436581504 1.064646159694967 0.9775754514503477 0.9382914587616956 0.9614984448431186 1.0118869499374659 0.988344828234037 1.0 11.99404643772515 -6.771240963235416 24.99999569040988 0.9984108621468151 0.8893089587658347 0.5388186104347699 0.04740667934223259 115.84910676245019 295486.1196240438 0.0069177053816479985 0.01318709685744628 1.6933979776002912e-07 6.771240963235416 -0.10910190338098036 GEIKDSSPS(ph)SSPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GEIKDSSPSSSPSPK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 2 GEIKDS(0.027)S(0.194)PS(0.725)S(0.094)S(0.084)PS(0.876)PK 88.264 1.09e-05 19055000.0 5302.5 5837.6 6079.4 5024.9 8304.6 5996.6 6381.4 6127.7 8930.9 9282.9 9209.5 True False 6197.43236632164 6134.708905594424 6941.5503352526885 6256.000725576333 7083.004341037103 6631.1562317790795 7540.817777820459 6996.320240294208 6908.065409716707 7185.886442745951 6922.526980730466 0.8952557907788301 0.8861950155876589 1.002748036168754 0.9037163369663312 1.0231819046358854 0.9579097705559768 1.089315765588356 1.010659873160358 0.9979109404623465 1.0380438332343915 1.0 12.75708305620701 -5.845430399706009 0.7767161848450587 1.00505005142725 0.8624073236470807 0.5039198897037691 0.04331046286709544 0.8270791972521089 0.5677275741779253 0.006284387745507709 0.08538412468939445 1.4274785804075218e-06 5.845430399706009 -0.1426427277801693 GEIKDSSPS(ph)SSPSPK ddPTM_A549_PD325901_60min_R1 1 GEIKDSSPSSSPSPK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 GEIKDS(0.277)S(0.164)PS(0.46)S(0.083)S(0.015)PSPK 71.344 0.00042764 11785000.0 2901.6 3223.6 2847.7 3557.3 4162.7 3588.2 3476.2 3598.8 3388.2 3492.2 3493.1 True False 3196.168295954979 3495.2640852251843 3040.9620466112106 3777.0263417855317 3870.326312535396 3558.97888886392 3608.4886932496283 3527.0191107960172 3245.8057367828856 3271.7018960174178 3063.470844585311 1.0433160483979178 1.1409490289104818 0.992652517645505 1.2329238740631172 1.2633795158769678 1.1617472694915376 1.1779086129145433 1.1513147308158744 1.0595190558186156 1.067972264792451 1.0 11.580951405743171 -8.97489975999535 1.846804364729586 1.021067117164354 1.149361904060799 0.26849674042359417 0.0741209715222441 0.25713312083475043 1.7583236966842368 0.0149771390125415 0.014979792669606256 1.0594982409549957e-09 8.97489975999535 0.12829478689644502 GEIKDSSPSSSPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GEIKDSSPSSSPSPK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 GEIKDS(0.001)S(0.001)PS(0.009)S(0.014)S(0.014)PS(0.962)PK 51.486999999999995 0.0059628 4614000.0 2857.2 3709.9 3126.2 3312.0 4156.3 2767.8 2661.1 2607.3 4454.7 4638.5 4653.7 True False 3339.4255081667516 3898.7180637359083 3569.5421683170957 4123.440148681328 3544.913775817319 3060.686758883054 3144.5874241636657 2976.89275952137 3445.717562694132 3590.6596284218394 3498.0578544139626 0.9546513085691125 1.1145379024581825 1.0204354292805455 1.1787798602239348 1.0133948388944547 0.8749674494436908 0.8989523773015142 0.851013014483174 0.9850373281694624 1.0264723391841644 1.0 11.772338434866732 -6.997086740974107 24.99984463196216 0.9648759602738269 1.0707726016957808 0.3711535429030377 0.07411752181655797 88.58614826424765 760175.6061211574 0.010912767640604065 0.020541885333413997 1.0067305760088831e-07 6.997086740974107 0.10589664142195387 GEIKDSSPSSSPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 GEIKDSSPSSSPSPK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 GEIKDSSPS(0.001)S(0.117)S(0.117)PS(0.765)PK 71.742 0.00038628 11877000.0 3481.8 3947.6 3955.7 4779.0 4653.6 4606.8 4416.6 4220.7 4840.6 4836.1 4517.7 True False 3835.269772834313 4280.278106103402 4224.1575895564765 5074.187976103521 4326.7471900484625 4569.283748179673 4584.676129856253 4136.514827424903 4637.16641563994 4530.74782066601 3962.051540059849 0.9680009798096617 1.0803186336235158 1.0661541241567667 1.2806971148151376 1.0920471746268865 1.1532620668813036 1.1571470192906677 1.0440335734154582 1.1703952784950127 1.143535810893962 1.0 11.952031932205266 -10.96443776978274 1.1841185730839194 0.9988708110853547 1.1202625996969011 0.0 0.0874332561864794 0.5575519887250495 1.3683876041261258 0.05596897177770443 0.0124645144593587 1.0853310559804627e-11 10.96443776978274 0.12139178861154643 GEIPS(ph)PQLTRPK ddPTM_A549_MK2206_60min_R1 4 GEIPSPQLTRPK 12 1 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 GEIPS(0.997)PQLT(0.003)RPK;GEIPS(0.919)PQLT(0.081)RPK;GEIPS(0.999)PQLT(0.001)RPK;GEIPS(0.982)PQLT(0.018)RPK 78.373 0.00027694 48821200.0 7984.200000000001 9682.3 7539.1 8145.900000000001 11678.0 8574.099999999999 8750.400000000001 9777.599999999999 13128.5 12822.500000000002 12030.8 True False 9331.737765051439 10175.08771355298 8608.257744597087 10141.645865683351 9960.181669753054 9481.40557097305 10340.234412987771 11163.604742644162 10154.915711906502 9925.888344386993 9043.220326811672 1.031904280534265 1.125161982771282 0.9519018041698054 1.121463980659083 1.101397655901708 1.0484545580363922 1.143423917509857 1.234472271956694 1.1229313612761191 1.0976054973423963 1.0 13.14262089825415 GEIPS(ph)PQLTRPK ddPTM_A549_PD325901_60min_R1 2 GEIPSPQLTRPK 12 1 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 GEIPS(1)PQLTRPK;GEIPS(1)PQLTRPK 102.28 5.9516000000000004e-05 73756000.0 5672.4 6304.6 6368.799999999999 6032.5 7511.4 5951.8 6339.2 6565.3 6890.5 6942.9 6884.299999999999 True False 6248.257872199829 6835.910767995627 6801.025066705586 6405.113824198469 6983.825176923245 5903.330514113003 6580.441724943344 6434.349941121783 6600.91624735921 6504.524109117276 6037.5747431733 1.0348953243626091 1.132227932370528 1.1264498339164284 1.0608752846398708 1.1567269100593534 0.9777652062672869 1.089914743065312 1.0657176457147992 1.0933059263279319 1.0773405524249544 1.0 12.559753428807268 -14.99999999994033 0.24527744940666127 0.47548433218566616 1.093484634500647 0.0 0.052487245627848685 37.7444740349923 0.48278208409224516 9.601343754077257 0.023570757406623444 1.0000000001373944e-15 14.99999999994033 0.6180003023149809 GEKS(ph)DEDKDKEGEALEVK ddPTM_A549_MK2206_60min_R1 4 GEKSDEDKDKEGEALEVK 18 3 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 GEKS(1)DEDKDKEGEALEVK;GEKS(1)DEDKDKEGEALEVK;GEKS(1)DEDKDKEGEALEVK;GEKS(1)DEDKDKEGEALEVK 136.64 1.1099000000000001e-13 163388000.0 19046.100000000002 18756.5 18702.6 15834.2 25866.199999999997 20705.4 18147.800000000003 20633.3 25747.799999999996 26967.600000000002 27966.7 True False 22260.61604756222 19711.12573451106 21354.90990888852 19713.57971082424 22061.316244747937 22896.43168486784 21445.02035107189 23558.13346183111 19915.964410787692 20875.60043018839 21021.796548346236 1.0589302392099043 0.9376518172069226 1.0158460938281932 0.9377685520591288 1.049449612644238 1.0891757815375243 1.020132618149563 1.1206527190790647 0.9473959261752279 0.9930454983796642 1.0 14.35959834859428 -4.369944169706095 16.24574121623967 0.9987150906876239 1.0083607568822357 0.0 0.06038860160487682 0.0 0.0 0.008164060414595688 0.0 4.266343608311178e-05 4.369944169706095 0.009645666194611824 GEKS(ph)DEDKDKEGEALEVK ddPTM_A549_PD325901_60min_R1 4 GEKSDEDKDKEGEALEVK 18 3 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 GEKS(1)DEDKDKEGEALEVK;GEKS(1)DEDKDKEGEALEVK;GEKS(1)DEDKDKEGEALEVK;GEKS(1)DEDKDKEGEALEVK 149.99 7.074900000000001e-18 283350000.0 40565.2 40520.5 38266.3 36337.4 43825.3 38184.9 39207.7 42353.1 40188.600000000006 40039.9 44795.1 True False 44683.34924147807 43935.304741707114 40863.281231955116 38581.878669776925 40747.162117077256 37873.934834563246 40699.77047877666 41508.33419513583 38499.61290162114 37511.77388074792 39285.58667953491 1.1373980387762677 1.11835684420603 1.040159628142758 0.9820873742958619 1.0372038592541557 0.9640669272299035 1.035997522724497 1.05657921144802 0.9799933297592014 0.9548482548254518 1.0 15.261712484908475 -5.83280275663208 2.4993122638651353 0.9992902554678704 1.136152334978721 0.7198645621389099 0.03022858974415342 0.09967724670095748 1.2165454793077637 0.0038873529908608753 0.01760384132342134 1.4695935708813042e-06 5.83280275663208 0.1368620795108506 GELQYRPS(ph)R ddPTM_A549_MK2206_60min_R1 2 GELQYRPSR 9 1 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 GELQY(0.003)RPS(0.997)R;GELQY(0.001)RPS(0.999)R 51.841 0.0070266999999999994 12638100.0 1462.8200000000002 1454.75 1619.25 1681.52 2416.7 1816.04 1389.87 1548.71 2445.0 2196.69 2628.0 True False 1709.7082534847013 1528.7905612603604 1848.8839984797694 2093.4924754863014 2061.206631383131 2008.21214741021 1642.3913882313168 1768.244385225458 1891.2114038626974 1700.456203332537 1975.3950708898062 0.8655019336028678 0.7739163592079455 0.9359565717894343 1.0597841952411569 1.0434402017894433 1.0166129180962376 0.831424261624542 0.8951345537320602 0.9573838832202873 0.8608182881445459 1.0 10.947925499883075 -5.8959588707748605 5.453212464128038 0.9749848789770207 0.8216537607487039 0.32340538980475786 0.07320758212271254 0.13742587693689498 6.116400463190164 0.009367369997088029 0.030268241841813214 1.2706944387729346e-06 5.8959588707748605 -0.1533311182283168 GELQYRPS(ph)RR ddPTM_A549_MK2206_60min_R1 1 GELQYRPSRR 10 2 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 GELQY(0.001)RPS(0.999)RR 65.395 0.0011468 5282500.0 224.36 277.05 206.76 204.95 398.41 193.33 266.75 279.07 238.26 435.58 320.42 True False 262.22648292464373 291.15066162377235 236.08167702681942 255.16275920055514 339.80441677053545 213.78805227793228 315.21502213207253 318.62902711603124 184.2944904230372 337.18217547655183 240.85087085788118 1.0887504038936013 1.208842054781573 0.9801985609847518 1.059422198855652 1.41084985725895 0.8876366172829084 1.308755999134715 1.322930766167105 0.7651809178293725 1.3999624509371729 1.0 7.911996330141696 -8.767201209745048 24.998887937825593 0.8891132125207106 1.1552621568333272 0.0 0.21833481593270565 109.27868819468046 474126.90140140674 0.027640356658922297 0.029815573758361115 1.7092232441164231e-09 8.767201209745048 0.2661489443126166 GELQYRPS(ph)RR ddPTM_A549_PD325901_60min_R1 2 GELQYRPSRR 10 2 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 GELQY(0.001)RPS(0.999)RR;GELQYRPS(1)RR 78.903 0.00026665 13774600.0 1032.8 1255.93 1181.3799999999999 1389.93 1579.5500000000002 1166.81 1239.0 1401.35 1396.97 1426.6399999999999 1497.12 True False 1137.6490956928255 1361.771628786718 1261.5555510150482 1475.7828193399382 1468.6078571516773 1157.3078862146228 1286.1508230068157 1373.3989749121915 1338.2602089940349 1336.561706928094 1312.983731025611 0.8664609231709015 1.0371580367739952 0.9608310607395031 1.1239917026139845 1.118527078781474 0.8814335310237355 0.9795634116518449 1.0460137033376555 1.0192511737740115 1.0179575537345507 1.0 10.358633324796859 -5.255799775770346 24.308670736193296 1.0140537067120747 0.8664608282941451 0.30961367006189167 0.06495201299739416 396.11120284731754 1707300.0035861896 0.008509226353223688 0.10346924240398442 5.548814728476804e-06 5.255799775770346 -0.14759287841792967 GELS(ph)VIK ddPTM_A549_PD325901_60min_R1 1 GELSVIK 7 0 A6NGH7 A6NGH7 CCDC160 Coiled-coil domain-containing protein 160 1 GELS(1)VIK 49.418 0.054666 2316600.0 1551.8 2112.5 1468.3 1497.0 1346.2 1638.0 1507.7 1546.7 1083.8 1547.7 1630.1 True False 1709.3375936252182 2290.527788819394 1567.9476676051704 1589.4662900663245 1251.6475561378795 1624.660671077169 1565.076348545096 1515.8498551373225 1038.2516550160235 1449.9779578678663 1429.6080340552849 1.1956687098186214 1.6022068526867388 1.0967675266607628 1.1118196402111558 0.8755179925698967 1.1364378433636735 1.0947590607094841 1.0603255011357209 0.7262491747971479 1.014248607539508 1.0 10.481403931778043 -6.146865463275496 0.5377266139063253 0.8909591919619758 1.5051649925612116 0.3774768856496442 0.1628712751292069 1.182289590354683 0.3925575741668526 0.03451651400805983 0.3804910692579945 7.130738935546236e-07 6.146865463275496 0.6142058005992358 GELVGGLDIVK ddPTM_A549_PD325901_60min_R1 2 GELVGGLDIVK 11 0 O76003 O76003 GLRX3 Glutaredoxin-3 0 ; 161.63 5.096600000000001e-13 1902930.0 2413.7 2484.1 2522.1 2693.6 3101.0 2532.7 2465.3 2676.3999999999996 2954.0 2695.4 2875.3 False True 2658.7370471279737 2693.443824949707 2693.264872619354 2859.97755439055 2883.196457869234 2512.074530914009 2559.1183405639235 2623.0171024048154 2829.853652811714 2525.2119840001596 2521.65632802844 1.0543613804846717 1.0681248649991806 1.0680538988138348 1.1341662710344937 1.1433740695836474 0.9962001970657427 1.0148561134676006 1.040196109695735 1.1222201936709744 1.0014100478055628 1.0 11.300155951432775 -7.25847923806405 24.992566999431766 1.0501827707627522 1.0930325796922113 0.28935304527140626 0.0440189451625415 454.6637807977919 3838745.34175189 0.008120792641088143 0.01372496595938301 5.514685653263214e-08 7.25847923806405 0.04284980892945911 GEPAAAAAPEAGAS(ph)PVEK ddPTM_A549_MK2206_60min_R1 2 GEPAAAAAPEAGASPVEK 18 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK 224.86 5.144699999999999e-64 109800000.0 11285.3 11803.0 11317.599999999999 10400.3 14862.6 11397.2 10786.1 11336.3 14625.3 14658.8 17654.0 True False 13189.982740905167 12403.7222853109 12922.60586147578 12948.3739668872 12676.331228367164 12603.244139150927 12745.794752460166 12943.25524096271 11312.692901804945 11347.366899021255 13270.024574386842 0.9939682226635685 0.9347173560817637 0.9738192863951712 0.9757611144051326 0.9552605692105803 0.9497528861760436 0.9604951883104633 0.975375378425836 0.8524997703199553 0.8551127268387576 1.0 13.695883421946569 GEPAAAAAPEAGAS(ph)PVEK ddPTM_A549_PD325901_60min_R1 2 GEPAAAAAPEAGASPVEK 18 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK 254.71 1.2381999999999995e-86 97176000.0 11997.3 12130.7 13221.2 12115.1 15112.9 11077.6 13304.3 12665.9 16289.8 19357.0 20867.1 True False 13215.25706405454 13152.996661695357 14118.470137534203 12863.42221161158 14051.422040674619 10987.387698366576 13810.6024168923 12413.26868829367 15605.196355305441 18134.7957165137 18300.57898744557 0.7221223477749188 0.7187202476336121 0.7714766919243186 0.7028970078179522 0.7678129774098444 0.6003847039978387 0.754653851463746 0.6782992328717758 0.8527159914454513 0.9909410914788217 1.0 14.159601672272036 -9.32661492669622 0.9085118362602582 0.971077033242317 0.7129487180537765 0.7999449834454984 0.053036561878911634 0.14481673861114594 0.25386252550520666 0.01502404070179993 0.011563780870195418 4.713951102497512e-10 9.32661492669622 -0.2581283151885405 GEPNVS(ph)YICSR ddPTM_A549_PD325901_60min_R1 1 GEPNVSYICSR 11 0 P49840;A8MT37;A0A3B3ITW1;P49841;P49841-2 P49840;A0A3B3ITW1 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta 1 GEPNVS(0.626)Y(0.374)ICSR 93.928 0.00028907 83514000.0 6647.6 8491.2 7901.7 6446.7 7540.9 7229.9 6426.4 7243.8 5905.6 6311.1 6666.4 True False 7322.459458295527 9206.78322386899 8437.956878782108 6844.898017482013 7011.253198692716 7171.0220914657075 6670.960168661014 7099.316726348836 5657.408169277201 5912.616068940937 5846.4750617913905 1.2524571439892342 1.5747579740890887 1.4432554299131268 1.170773490887807 1.1992274190158663 1.2265548070718135 1.1410225987720193 1.2142900895524504 0.967661387328956 1.0113129717394673 1.0 12.513351346348745 -7.224673876901519 0.4512770397252826 0.9740869323164957 1.472623861890672 0.650310394221874 0.10353459387820095 0.5126720680716288 0.18567007474673167 0.029455276106648075 0.10448168472122482 5.961096098160751e-08 7.224673876901519 0.4985369295741763 GEPNVSY(ph)ICSR ddPTM_A549_MK2206_60min_R1 2 GEPNVSYICSR 11 0 P49840;A8MT37;A0A3B3ITW1;P49841;P49841-2 P49840;A0A3B3ITW1 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta 1 GEPNVSY(1)ICSR;GEPNVS(0.005)Y(0.995)ICSR 208.84 8.8195e-31 108672000.0 27861.0 30258.0 25986.0 26330.0 33845.0 31979.0 28098.0 28537.0 40212.0 38474.0 39232.0 True False 32563.25566394855 31798.002957632583 29671.205548553527 32780.85118199863 28866.44533420038 35362.99655405781 33203.04289359689 32582.207140897215 31104.046205368802 29782.696678646505 29489.61165188313 1.1042280260706365 1.0782781181725751 1.006157893797113 1.1116067437227621 0.978868276563318 1.1991679297614495 1.1259233687289547 1.104870675325309 1.0547458736501394 1.0099385854999776 1.0 14.847919203251527 -9.59489021929797 1.0803927362198291 1.0109187101387005 1.086157863003148 0.23596280586163565 0.05598069582028671 0.45334669477918305 1.0970847010949483 0.01564746323772298 0.011004141249905744 2.541615092313195e-10 9.59489021929797 0.0752391528644476 GEPNVSY(ph)ICSR ddPTM_A549_PD325901_60min_R1 1 GEPNVSYICSR 11 0 P49840;A8MT37;A0A3B3ITW1;P49841;P49841-2 P49840;A0A3B3ITW1 GSK3A;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta 1 GEPNVS(0.004)Y(0.996)ICSR 166.87 2.4685e-14 78121000.0 30276.0 30964.0 34521.0 27389.0 27633.0 28659.0 28358.0 30765.0 22686.0 26724.0 32847.0 True False 33349.59723198679 33573.44494816745 36863.802651636644 29080.756325067847 25692.15340867481 28425.61060586116 29437.179208093024 30151.36794032438 21732.5863126901 25036.64207925362 28807.02723428865 1.1576896484581085 1.1654602425690561 1.2796809039621455 1.0095021637794468 0.8918710424272366 0.9867595977424045 1.0218749393569606 1.0466671099069735 0.7544196121292956 0.86911578468787 1.0 14.814133167585075 -6.457285926889009 4.114393438000879 0.9136551384420162 1.19574877689291 0.6348840683407282 0.0853511766105549 0.12845598841068534 4.245783907263402 0.015854458598030814 0.03762974399184765 3.489105272738707e-07 6.457285926889009 0.28209363845089386 GEPPAPKS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 GEPPAPKSPPK 11 1 O95466-2;O95466;O95466-3;K7EK60;K7ERL1;K7EJE6 O95466-2 FMNL1 Formin-like protein 1 1 GEPPAPKS(1)PPK 67.115 0.0013364000000000002 19270000.0 7367.6 6794.2 6684.1 7281.7 8984.9 7122.7 6885.7 7493.9 7435.7 7610.6 7813.3 True False 8115.553328259546 7366.771078246974 7137.723220758512 7731.474071059428 8353.831620222276 7064.695092723657 7147.739081499615 7344.428285649179 7123.2033873432865 7130.065417166876 6852.313632589505 1.1843522879136896 1.0750779186770898 1.0416515652190237 1.1283012549642575 1.2191256950778746 1.0309941242508325 1.0431132409796702 1.071817298425919 1.0395325972041667 1.0405340151472908 1.0 12.742375470209275 -7.471837294616121 24.936834473806318 1.0261370071949223 1.1220338868868303 0.4639284990676372 0.04811029293542066 235.74707343360143 115176.77289644284 0.007459439836418857 0.011924665064920932 3.3741369465850604e-08 7.471837294616121 0.09589687969190797 GEPPAPKS(ph)PPKAR ddPTM_A549_PD325901_60min_R1 2 GEPPAPKSPPKAR 13 2 O95466-2;O95466;O95466-3;K7EK60;K7ERL1;K7EJE6 O95466-2 FMNL1 Formin-like protein 1 1 GEPPAPKS(1)PPKAR;GEPPAPKS(1)PPKAR 54.281000000000006 0.0041494999999999995 14037000.0 4377.700000000001 4550.8 5367.4 5651.1 6170.1 6660.3 5687.7 6221.6 6300.7 5562.0 6067.5 True False 4822.120881307594 4934.311887033991 5731.664040798195 6000.155612420713 5736.733461689444 6606.060725015426 5904.148535928866 6097.505307249221 6035.903490274466 5210.814370783141 5321.235965051495 0.9062031665158319 0.9272868031865676 1.0771302153188254 1.1275868335529915 1.0780828926525396 1.2414523182964123 1.109544582256038 1.1458813980992504 1.13430479871908 0.9792488822157908 1.0 12.377545664514772 -5.758325607412588 4.474620166774749 1.0914722184768453 0.9113505485043178 0.5203832182977367 0.06748373421459633 0.12474681725634737 6.026819814203152 0.010184694285232276 0.038852953911722186 1.7445137329071626e-06 5.758325607412588 -0.18012166997252743 GEQVS(ph)QNGLPAEQGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GEQVSQNGLPAEQGSPR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 GEQVS(1)QNGLPAEQGS(1)PR 58.577 0.006822 2772500.0 347.78 538.02 344.0 654.42 456.89 485.9 350.96 376.24 555.94 425.66 434.52 True False 383.08636957789577 583.3608335813544 367.3459086400453 694.8420371043452 424.79962258493254 481.9429914996318 364.31597485268077 368.73559804542975 532.575775133427 398.78375495640984 381.0767946492253 1.0052734119654814 1.5308222431080543 0.9639681917083956 1.8233648620455503 1.114734952507285 1.2646873235701799 0.9560172121947951 0.9676149354222542 1.397554987895954 1.0464655957954183 1.0 8.573937948898884 GEQVSQNGLPAEQGS(ph)PR ddPTM_A549_MK2206_60min_R1 3 GEQVSQNGLPAEQGSPR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR 148.52 1.5783e-16 423890000.0 3884.8 4906.6 4349.6 3647.7 5857.700000000001 4258.4 2937.6000000000004 4664.3 5646.8 5471.0 6807.6 True False 4540.459265758852 5156.324982216933 4966.438684445029 4541.386663751473 4996.040089648267 4709.0210615028545 3471.3238950896953 5325.478808819667 4367.808816086655 4235.0973002254805 5117.085039798116 0.887313622979771 1.0076684170995065 0.9705601227688352 0.887494858582738 0.9763449406823569 0.9202546029386761 0.6783791686265682 1.0407250939550095 0.8535736228958544 0.827638639437692 1.0 12.321106494065457 -4.941754961891678 14.89447975557474 0.926929587026544 0.5953778912553463 0.0 0.09898104309333883 3535444.477112964 23446783.731623933 0.012814259152718903 34480576.188178 1.1435233528050533e-05 4.941754961891678 -0.3315516957711977 GEQVSQNGLPAEQGS(ph)PR ddPTM_A549_PD325901_60min_R1 3 GEQVSQNGLPAEQGSPR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR 361.35 2.5651999999999984e-245 571370000.0 18472.9 18024.5 20945.9 17075.4 23207.9 20977.4 19546.6 19839.3 22921.5 19647.4 24145.2 True False 20348.255208969786 19543.487871988254 22367.41473192885 18130.108676952925 21577.85716690855 20806.567009434795 20290.456559309947 19443.589597870225 21958.189066663406 18406.859810953738 21175.493469033594 0.9609341684870987 0.9229295128620292 1.0562877679633906 0.8561835266538582 1.0190013847121608 0.982577668844492 0.9582046618645323 0.9182118766820686 1.0369623309498974 0.8692529332490587 1.0 14.370107969745991 -8.776266568271081 24.997388579957523 1.017454435707425 0.960605870323896 0.0 0.06730080922581815 253.10596101422487 426713.53085218277 0.008112839643473976 0.008653797284196055 1.6739151180249627e-09 8.776266568271081 -0.056848565383529115 GES(ph)AGYMEPYEAQR ddPTM_A549_MK2206_60min_R1 1 GESAGYMEPYEAQR 14 0 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 GES(0.686)AGY(0.313)MEPY(0.001)EAQR 60.434 0.006683 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GES(ph)DDFHMDFDSAVAPR ddPTM_A549_MK2206_60min_R1 2 GESDDFHMDFDSAVAPR 17 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GES(0.98)DDFHMDFDS(0.02)AVAPR;GES(1)DDFHMDFDSAVAPR 62.617 0.00076024 2681200.0 784.9200000000001 1082.46 824.87 662.65 1139.7199999999998 956.73 861.29 939.6999999999999 1216.43 998.88 1187.66 True False 917.3953065484548 1137.5525904395195 941.8489694772321 824.9992797474889 972.0686977779545 1057.9705335740243 1017.7752442816591 1072.9053527105552 940.9105472395496 773.2323142477109 892.7312442515173 1.0276276454484532 1.2742385771355689 1.055019610372096 0.9241295015267263 1.0888704792593602 1.185094103501493 1.1400690306688896 1.201823459881366 1.0539684292425844 0.8661423236015486 1.0 9.80208210874617 -9.034755854499803 4.037277920372924 1.0219500949058697 1.1127012369288332 0.23996859141706495 0.10092321740599919 0.27168469267697376 9.45210688163219 0.016815741702504973 0.01687276260289909 9.230902110568906e-10 9.034755854499803 0.09075114202296342 GES(ph)ENAGTNQETR ddPTM_A549_MK2206_60min_R1 2 GESENAGTNQETR 13 0 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 GES(1)ENAGTNQETR;GES(1)ENAGTNQETR 125.97 1.8491e-06 33738000.0 826.38 946.98 707.5799999999999 652.27 1274.8 907.12 766.3900000000001 1043.09 1231.52 1124.69 1333.28 True False 965.8527409487747 995.177237121386 807.9254838007204 812.0761792815131 1087.2786087173488 1003.1108363024779 905.6331426871566 1190.9512018291512 952.582686333328 870.6217478688718 1002.1897793439731 0.9637423578406633 0.9930027801449168 0.8061601709105267 0.8103017971437434 1.0849029107332089 1.0009190444539433 0.9036543390813446 1.188348979779798 0.9505012982240573 0.8687194439747481 1.0 9.968940014545854 -6.759334559767092 24.999397226079633 0.9949119506797879 0.8941988904129382 0.22031995148451988 0.09591242031375996 65.49031241958252 777822.8048442878 0.012533677078308731 0.025111852523393093 1.7404655851026806e-07 6.759334559767092 -0.10071306026684967 GES(ph)ENAGTNQETR ddPTM_A549_PD325901_60min_R1 2 GESENAGTNQETR 13 0 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 GES(1)ENAGTNQETR;GES(1)ENAGTNQETR 147.35 1.4156e-12 36755000.0 701.55 696.0500000000001 933.4 950.76 1054.99 828.1600000000001 881.9 806.56 880.47 926.02 883.3299999999999 True False 772.7708395461859 754.7085762876874 996.746136990169 1009.4862858673741 980.8911419179179 821.4157395355727 915.4611870941966 790.4725280659203 843.4669078169024 867.5509391644385 774.686009890224 0.997527810855511 0.974212218437548 1.286645330191792 1.3030908948651625 1.2661789801224292 1.0603208642582438 1.1817190131314246 1.0203779569711517 1.088785517033443 1.1198742820815544 1.0 9.59746787595054 -8.77160244975774 0.7272154783138901 1.0240567893929435 1.159495704533493 0.08998190231681358 0.11196883433902448 0.7506717133173516 0.8324657041517323 0.03143036546547293 0.03173461995482976 1.6919890583454002e-09 8.77160244975774 0.1354389151405495 GES(ph)GEVTDDEMATR ddPTM_A549_PD325901_60min_R1 2 GESGEVTDDEMATR 14 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 GES(1)GEVTDDEMATR;GES(1)GEVTDDEMATR 89.23100000000001 2.6061e-05 7053600.0 1150.8 1032.97 695.03 1020.35 1240.72 1190.8899999999999 688.64 867.16 808.53 885.76 1383.7800000000002 True False 1267.6283688258168 1120.0220071085303 742.1989153549148 1083.3747021170173 1153.576107451634 1181.1917866783208 714.8465720382674 849.8638135261402 774.5502958388133 829.8329624352529 1213.5838325041534 1.0445330061872578 0.9229045222178313 0.6115761395926265 0.8927069338766175 0.9505532922857935 0.9733087694823738 0.5890376526879291 0.7002926297827321 0.6382338616365528 0.6837870942322501 1.0 10.245058055747403 GESAADS(ph)DGWDSAPSDLR ddPTM_A549_MK2206_60min_R1 2 GESAADSDGWDSAPSDLR 18 0 Q9BUL5-4;Q9BUL5;A0A087WVQ2;I3L0Y2;I3L4Q4;Q9BUL5-2 Q9BUL5-4 PHF23 PHD finger protein 23 1 GES(0.002)AADS(0.996)DGWDS(0.002)APSDLR;GESAADS(1)DGWDSAPSDLR 120.66 3.0127e-10 8272100.0 736.51 975.8499999999999 502.18999999999994 777.21 1140.48 884.9100000000001 616.05 846.06 1230.54 1310.6599999999999 985.36 True False 860.8148820593215 1025.5165968076453 573.4080933744361 967.626484890283 972.7169027847204 978.5505888442826 727.978310719637 965.9915959500821 951.8246547685894 1014.5809957070971 740.6679174474807 1.162214349753255 1.3845835260987427 0.7741770365193323 1.3064241910530645 1.3132969308795448 1.3211731813855292 0.9828673465814812 1.3042168739792603 1.285089622956541 1.369819013092381 1.0 9.532683036978135 -10.913380709157865 1.1646478823004802 0.9998864729531666 1.2092947352929786 0.0 0.20234748465212118 0.68422819064951 1.6472914065372426 0.11481611123855628 0.02717770578487366 1.220729081284161e-11 10.913380709157865 0.20940826233981202 GESAADS(ph)DGWDSAPSDLR ddPTM_A549_PD325901_60min_R1 2 GESAADSDGWDSAPSDLR 18 0 Q9BUL5-4;Q9BUL5;A0A087WVQ2;I3L0Y2;I3L4Q4;Q9BUL5-2 Q9BUL5-4 PHF23 PHD finger protein 23 1 GESAADS(1)DGWDSAPSDLR;GESAADS(0.976)DGWDS(0.024)APSDLR 182.1 1.3206e-39 9539900.0 952.3799999999999 1151.0 712.22 681.07 619.24 664.86 935.15 737.91 958.62 905.1600000000001 1031.02 True False 1049.0649164949 1247.998809434851 760.5555321267827 723.1381470778039 575.746718662027 659.4456005936305 970.7376449837153 723.1918061708034 918.3325350908478 848.0080431244281 904.2110761742706 1.1601991439139498 1.3802073899770737 0.8411260956288034 0.7997448451277673 0.6367392900096062 0.7293049355066008 1.0735741582495533 0.7998041886753232 1.015617436336132 0.9378430163810443 1.0 9.820515779897688 -5.7633398790787025 24.999989053106326 0.9326860241302571 1.270203306458149 0.4983422063178017 0.14401682641365898 34.67590302574669 456174.2487916758 0.022375939398400203 0.07511452640906037 1.7244877787614944e-06 5.7633398790787025 0.3375172823278919 GESAEDKEHEEGRDS(ph)EEGPR ddPTM_A549_MK2206_60min_R1 5 GESAEDKEHEEGRDSEEGPR 20 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WX58;K7EPS6 Q7Z4V5-2;K7EPS6 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR 248.47 6.575599999999998e-98 662359800.0 9616.48 9858.65 9481.07 8925.99 12122.330000000002 10826.630000000001 9805.769999999999 11967.800000000001 13573.15 13790.7 13513.599999999999 True False 11239.506723636909 10360.41317530123 10825.628291781124 11112.857950702914 10339.151315353452 11972.296800464648 11587.351481057214 13664.272299850365 10498.853196866645 10675.371291942885 10157.80016361357 1.1064902382996407 1.0199465443722198 1.065745350116238 1.0940221083016057 1.0178533884127297 1.1786308657016917 1.1407343415323785 1.34519995272179 1.0335754816751335 1.0509530725149836 1.0 13.310300376474684 -8.973712696666293 24.999854368264177 1.014812562047139 1.1187992449087159 0.18795002781524084 0.08548570138311636 195.7328497176687 186148.4004906375 0.015334484413945207 0.015978756725980363 1.0623981440431874e-09 8.973712696666293 0.10398668286157675 GESAEDKEHEEGRDS(ph)EEGPR ddPTM_A549_PD325901_60min_R1 6 GESAEDKEHEEGRDSEEGPR 20 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WX58;K7EPS6 Q7Z4V5-2;K7EPS6 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR 359.9 1.1146999999999995e-256 799765700.0 15382.009999999998 16079.48 15182.74 17821.170000000002 18027.63 16250.71 16168.68 19142.929999999997 18508.53 17863.68 19238.219999999998 True False 16943.580331562735 17434.554210539958 16213.132037632444 18921.94319608637 16761.431460747226 16118.369605665725 16783.98796524118 18761.109243811938 17730.680849246848 16735.76419616531 16872.0409011245 1.0042401171771382 1.0333399683364903 0.9609467006775606 1.1214969965385306 0.9934442169133254 0.9553301642714401 0.9947811330947254 1.1119644240882285 1.0508912912880102 0.9919229270627179 1.0 14.04234687717266 GESAGY(ph)MEPYEAQR ddPTM_A549_PD325901_60min_R1 1 GESAGYMEPYEAQR 14 0 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 GES(0.042)AGY(0.952)MEPY(0.006)EAQR 57.348 0.0044445 2799700.0 830.25 938.4 838.22 716.95 970.22 738.92 709.31 664.67 1002.9 900.22 890.06 True False 914.5363688022537 1017.482261315086 895.1066498263332 761.2343731884117 902.075094277294 732.9024805081451 736.3031801993252 651.412635426472 960.7516006786959 843.3799555674939 780.588262555209 1.1715989243914244 1.3034813743988651 1.1467078007248728 0.9752060205165737 1.1556349711490732 0.9389104546730342 0.9432670404101142 0.8345150275436012 1.230804569791676 1.080441502933621 1.0 9.608417959391579 -5.995226081563161 7.304705764449044 1.0635867338504716 1.235362751882413 0.32337689375978906 0.11272936777702193 0.14817134272879848 51.41119412488649 0.018361821471529424 0.054926239247633665 1.0110529913254997e-06 5.995226081563161 0.17177601803194142 GESAPTLSTSPSPSSPSPT(ph)SPSPTLGR ddPTM_A549_PD325901_60min_R1 1 GESAPTLSTSPSPSSPSPTSPSPTLGR 27 0 Q9H330;Q9H330-4;F8WBJ7 Q9H330 TMEM245 Transmembrane protein 245 1 GESAPTLSTSPSPS(0.006)S(0.007)PS(0.12)PT(0.359)S(0.252)PS(0.195)PT(0.06)LGR 99.885 4.0907e-13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GESAPTLSTSPSPSSPSPTSPS(ph)PTLGR ddPTM_A549_MK2206_60min_R1 1 GESAPTLSTSPSPSSPSPTSPSPTLGR 27 0 Q9H330;Q9H330-4;F8WBJ7 Q9H330 TMEM245 Transmembrane protein 245 1 GESAPTLSTSPSPS(0.001)S(0.001)PS(0.016)PT(0.187)S(0.145)PS(0.503)PT(0.145)LGR 78.079 1.6843000000000001e-06 4350400.0 1865.8 2158.9 2253.1 2408.4 2828.8 2109.2 2129.8 1941.0 2999.6 2854.7 3309.0 True False 2180.7014255696213 2268.778788592536 2572.623459610788 2998.458108117185 2412.687267288702 2332.394144026354 2516.7570914222592 2216.1426940631986 2320.1953893769105 2209.8212873247458 2487.283976245954 0.8767400290420171 0.9121510894050759 1.0343103096308435 1.205514986126652 0.9700087687334197 0.9377273227750317 1.011849517569276 0.8909890126048303 0.9328228748849058 0.8884475228518212 1.0 11.280355515873284 -6.969782658722029 24.999944127105316 0.9624615730659273 1.0130083127779466 0.0829034085650403 0.08643377058879542 474.5631014038986 392621.72302052774 0.012587815838184033 0.023788543592322714 1.072055677832627e-07 6.969782658722029 0.050546739712019284 GESDDFHMDFDS(ph)AVAPR ddPTM_A549_MK2206_60min_R1 6 GESDDFHMDFDSAVAPR 17 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GES(0.004)DDFHMDFDS(0.996)AVAPR;GES(0.001)DDFHMDFDS(0.999)AVAPR;GESDDFHMDFDS(1)AVAPR;GESDDFHMDFDS(1)AVAPR;GES(0.001)DDFHMDFDS(0.999)AVAPR;GES(0.001)DDFHMDFDS(0.999)AVAPR 105.79 2.7689000000000002e-09 11525540.0 1513.63 2494.13 1972.87 1854.2 2613.9 2365.99 1957.38 2264.106 3008.6799999999994 2670.68 3169.13 True False 1769.0937392994686 2621.0705637094375 2252.652631823859 2308.479083238202 2229.3987726123937 2616.3574913829466 2313.01060926289 2585.049959033824 2327.2187838746886 2067.371533132186 2382.1475574615724 0.7426465811314489 1.100297315965793 0.9456394188378053 0.9690747644944917 0.9358776981003022 1.0983188187430963 0.9709770505264773 1.0851762523848294 0.9769414898691599 0.8678604004426941 1.0 11.218047065548703 -5.246548434832169 24.551484989914524 0.9985327298655401 0.7426463466650309 0.5182182222656604 0.06987940119004622 962.7600993340391 1587320.6450973263 0.007088916235410047 0.220132502625198 5.668283522831722e-06 5.246548434832169 -0.25588638320050916 GESDDFHMDFDS(ph)AVAPR ddPTM_A549_PD325901_60min_R1 3 GESDDFHMDFDSAVAPR 17 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GESDDFHMDFDS(1)AVAPR;GESDDFHMDFDS(1)AVAPR;GESDDFHMDFDS(1)AVAPR 71.742 0.00023067 8796650.0 2433.59 2300.16 2154.79 2200.7 2560.42 2081.17 1864.143 2534.81 2492.59 2268.84 2954.58 True False 2680.6462652857285 2494.002555612221 2301.027007204892 2336.6322408476685 2380.584932169478 2064.221641529715 1935.0839819631904 2484.2512260300236 2387.835110515215 2125.585055197344 2591.1853906257675 1.034525076817586 0.9624948352344341 0.8880209866609341 0.9017618921830117 0.91872427993065 0.7966321703562894 0.7467948796577115 0.9587315654902179 0.9215222959938641 0.8203137694767638 1.0 11.33939652386523 -9.92040481166535 0.8549380585968384 0.9912394789445695 0.8976632443846315 0.0 0.09006608461793933 0.6811641388862405 1.019293580028432 0.031285746650648164 0.015896971082847152 1.2011443100630515e-10 9.92040481166535 -0.09357623455993802 GESGEVT(ph)DDEMATR ddPTM_A549_MK2206_60min_R1 2 GESGEVTDDEMATR 14 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 GES(0.134)GEVT(0.853)DDEMAT(0.014)R;GES(0.108)GEVT(0.873)DDEMAT(0.019)R 54.523999999999994 0.0083973 9968700.0 429.42999999999995 379.17 418.92 612.78 482.66999999999996 354.07 582.13 250.04 671.41 715.53 661.66 True False 501.90728544450747 398.468133433986 478.3291552528305 762.9111275087391 411.66988238908266 391.5374523873558 687.8954857872287 285.4839357153851 519.3367070214534 553.8912760428329 497.35156111299415 1.0091599678933716 0.801180019506277 0.9617525964579371 1.5339473868373201 0.8277241182632071 0.7872448444942184 1.3831171741932957 0.5740083233608781 1.0442044373184634 1.1136815873329358 1.0 8.958122194826494 GESGEVT(ph)DDEMATR ddPTM_A549_PD325901_60min_R1 1 GESGEVTDDEMATR 14 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 GES(0.001)GEVT(0.999)DDEMATR 98.94200000000001 1.7385e-05 5323400.0 627.01 395.81 558.71 525.68 445.3 557.39 386.84 525.01 691.14 408.33 488.17 True False 690.6635936196341 429.1662977953158 596.6274203961622 558.1500596940987 414.0236642016028 552.8508006420655 401.5614078869702 514.5382636876224 662.0937893040916 382.54797411396635 428.1281847645963 1.6132168313081074 1.0024247715232537 1.3935719292207172 1.3036984705900503 0.9670553795220261 1.2913207313039834 0.9379466761987798 1.201832259584914 1.5464849380755903 0.8935360663636477 1.0 8.741899004710726 -5.23771301303334 23.29291606081341 1.2222766471618236 1.6132179776180833 0.22545839506110288 0.21278697264291313 3352.1188448039943 3290751.2247530273 0.031033355321590777 2.2548708320200426 5.784781864068239e-06 5.23771301303334 0.3909413304562597 GESPS(ph)LESR ddPTM_A549_MK2206_60min_R1 1 GESPSLESR 9 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 GES(0.355)PS(0.635)LES(0.01)R 52.725 0.023349 2210800.0 641.7 691.42 849.37 849.47 1127.7 848.83 667.76 753.45 1248.3 1228.1 1398.1 True False 750.0032719412721 726.6103247064026 969.8234378809718 1057.5901881341576 961.8168238551568 938.6526271922482 789.0833483745558 860.253844843852 965.5620431254824 950.671357047507 1050.913184402982 0.7136681536328282 0.6914085154609473 0.9228387770507638 1.0063535255150202 0.9152200563565672 0.8931780865662006 0.7508549327248469 0.8185774596905047 0.9187838324380837 0.9046145496667054 1.0 10.037427778315639 -2.000000000264598 0.05397340276334555 1.241524842771103 0.13433604749625 0.19970385896030907 0.09246286640048336 302.57684530657 1.1941915323785603 5.3607458309257225 27.017050995901375 0.009999999993907403 2.000000000264598 -1.107188795274853 GESPSLES(ph)R ddPTM_A549_MK2206_60min_R1 1 GESPSLESR 9 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 GES(0.126)PS(0.2)LES(0.674)R 57.559 0.013231 2405500.0 464.6 515.31 556.29 716.47 854.31 311.0 592.8 592.6 923.48 686.78 1078.1 True False 543.0131216205632 541.5370779330306 635.1802868700396 892.0051821635609 728.6421306976137 343.90981357490807 700.5040866725124 676.6028647613867 714.3132544945291 531.6359210105751 810.3780159536911 0.670073855571612 0.6682524294488963 0.7838074014415722 1.1007272712276222 0.8991385703375889 0.42438196348426205 0.864416448721312 0.8349225317583776 0.8814568515335297 0.6560344808773234 1.0 9.662451226815076 -9.29032415740847 0.7188404382621573 0.9818361912053903 0.7756851807043923 0.0 0.18651940191910982 0.7041365217289512 0.7946936096930073 0.05552005294868449 0.04015990303696049 5.124787270712085e-10 9.29032415740847 -0.20615101050099804 GESQNTDLS(ph)PKPLISEQTVILGK ddPTM_A549_MK2206_60min_R1 2 GESQNTDLSPKPLISEQTVILGK 23 1 E9PPG5;E9PL28;P15622-2;P15622-3;P15622 E9PPG5 ZNF250 Zinc finger protein 250 1 GES(0.018)QNT(0.018)DLS(0.965)PKPLISEQTVILGK;GES(0.079)QNT(0.067)DLS(0.851)PKPLIS(0.002)EQT(0.001)VILGK 62.7 0.00022886 4345000.0 1184.41 1146.49 1516.66 1356.42 2223.98 1743.3400000000001 1520.6100000000001 1309.1999999999998 1920.4099999999999 1741.32 1716.5500000000002 True False 1384.3094519556837 1204.841443945277 1731.745193845501 1688.742960892007 1896.8354880884917 1927.8190816645651 1796.885153905344 1494.7831092568465 1485.4402012646062 1347.9546026007379 1290.283260630098 1.0728725189224486 0.9337805741639271 1.3421434243825028 1.3088156782467477 1.4700923014084437 1.494105318178841 1.3926284318591031 1.1584922124207693 1.1512512380724873 1.044696652068846 1.0 10.333472105229891 -9.133728746462745 1.1025023491885235 1.0420297427680778 1.2847821331697282 0.2742906769708001 0.1585970414809485 0.4398362867992449 1.1091766686171476 0.042063683977973845 0.03748878147635762 7.349727773238053e-10 9.133728746462745 0.24275239040165042 GESQNTDLS(ph)PKPLISEQTVILGK ddPTM_A549_PD325901_60min_R1 2 GESQNTDLSPKPLISEQTVILGK 23 1 E9PPG5;E9PL28;P15622-2;P15622-3;P15622 E9PPG5 ZNF250 Zinc finger protein 250 1 GES(0.021)QNT(0.017)DLS(0.962)PKPLISEQTVILGK;GES(0.001)QNT(0.004)DLS(0.995)PKPLISEQTVILGK 110.61 3.2758e-11 7816800.0 2496.7 2357.9 2993.4 2635.5 3402.3 3204.3 3064.0 3056.9 3309.8 2988.2 2956.2 True False 2750.1631460266044 2556.6085080507705 3196.5501247764882 2798.2888493452224 3163.3341852978087 3178.205243182281 3180.602196685134 2995.9277314083433 3170.700616139544 2799.5245420305982 2592.606140895792 1.0607716701142942 0.9861152713182328 1.232948605017198 1.0793343443899903 1.2201368095983989 1.2258727590933476 1.2267972934701832 1.1555660862444754 1.2229781323606714 1.0798109662207742 1.0 11.340187338622252 -4.02882296800798 10.928047707405987 1.127985701493659 0.6380985427053023 0.0 0.09261451317879496 0.0 0.0 0.014206473649120133 0.0 9.357870524347005e-05 4.02882296800798 -0.48988715878835665 GESRPET(ph)PK ddPTM_A549_MK2206_60min_R1 2 GESRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GES(0.004)RPET(0.996)PK;GES(0.079)RPET(0.921)PK 63.727 0.002612 63656000.0 5600.9 5301.7 4509.9 4054.6 7748.7 6385.0 5715.0 6736.3 9068.5 6352.700000000001 6887.2 True False 6546.194991142079 5571.533884608391 5149.4716348580605 5047.977182017912 6608.876494640822 7060.656461980026 6753.341523841781 7691.191154053541 7014.499229418761 4917.620657858236 5176.918162949876 1.2644965180233738 1.07622599184254 0.994698288203927 0.9750931003980771 1.2766043979484112 1.3638725279668649 1.3045100021425948 1.485669835211573 1.3549565607623604 0.9499127672236779 1.0 12.337877796826628 -6.772420053655012 24.878925712579438 1.2276007872328476 1.0716047036200744 0.19562052168562605 0.16266977047761405 313.40068273284675 710072.7544182485 0.026921768593353004 0.05122138194729605 1.6888067119232798e-07 6.772420053655012 -0.15599608361277317 GESRPET(ph)PK ddPTM_A549_PD325901_60min_R1 2 GESRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GES(0.017)RPET(0.983)PK;GESRPET(1)PK 85.522 0.00050158 67766000.0 8730.9 9495.1 9759.5 8484.2 10110.3 8551.2 8768.5 9018.599999999999 9473.900000000001 10044.7 10072.2 True False 9617.254540651127 10295.285400056353 10421.838358641056 9008.249764983773 9400.187406641511 8481.561862341325 9102.190065807306 8838.716948045165 9075.744929374712 9410.475927760777 8833.38325293641 1.0887396442868185 1.1654974210061557 1.1798240900706543 1.0197960970378177 1.0641661453460296 0.9601713884113279 1.0304307879748724 1.0006038111283104 1.0274370158633994 1.0653308770037266 1.0 13.108750391548693 -6.272567595055623 23.603163933851697 1.0138346915248657 1.1467680856140563 0.7058104203497114 0.03534003404411097 102.37875455063345 217147.75303273203 0.004196558783291283 0.009844737920340534 5.338661743782837e-07 6.272567595055623 0.13293339408919058 GESRPET(ph)PKQK ddPTM_A549_MK2206_60min_R1 2 GESRPETPKQK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GES(0.001)RPET(0.999)PKQK;GES(0.007)RPET(0.993)PKQK 88.507 0.00010520000000000001 110085000.0 9837.8 10272.7 9464.0 8288.9 11100.2 9372.6 8493.8 9045.8 11496.4 13657.6 14849.300000000001 True False 11498.18012888242 10795.536551750683 10806.137509101469 10319.680872102861 9467.375284346024 10364.402310971645 10037.013514471966 10328.069851600663 8892.48375597836 10572.338674384857 11161.808990168955 1.0301358981335134 0.9671852081736146 0.9681349607952661 0.9245527209068154 0.8481936299648788 0.9285593688353164 0.8992282096309226 0.9253042997508174 0.7966884009402633 0.9471886397354328 1.0 13.446283242706512 -5.838817646491091 1.2497410379647649 0.9017128194824444 1.0247928423112433 0.34568770220635314 0.05088052721956394 0.759840614234129 1.7953168371231767 0.010757080717073002 0.09165986724811653 1.4493802980777444e-06 5.838817646491091 0.12308002282879893 GESRPET(ph)PKQK ddPTM_A549_PD325901_60min_R1 2 GESRPETPKQK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GES(0.002)RPET(0.998)PKQK;GESRPET(1)PKQK 92.65 0.00010112 211760000.0 14167.7 14649.5 15641.8 14616.2 18188.8 16890.0 16209.800000000001 17439.5 15931.8 17310.2 16737.9 True False 15605.99447429051 15884.064777424714 16703.346609784472 15519.009478201344 16911.281435953555 16752.453439861645 16826.672809342916 17091.655491476926 15262.241850326895 16217.231017822778 14679.244410290139 1.0631333628691897 1.082076456625383 1.13788871844626 1.0572076494156968 1.1520539452356797 1.1412340425450092 1.1462901181444618 1.164341638694679 1.03971576627119 1.104772872809074 1.0 13.84149008931218 -8.9148737403766 5.243872340654209 1.017075827293812 1.1181805672637914 0.2788011944161489 0.04381813388434868 0.10082315689980818 4.546898916401998 0.006540721265195032 0.006889500110535838 1.2165396259306908e-09 8.9148737403766 0.10110473996997937 GESSSPS(ph)PSAEK ddPTM_A549_MK2206_60min_R1 1 GESSSPSPSAEK 12 0 E9PHV5;P28290-3;P28290;P28290-2 E9PHV5 SSFA2 Sperm-specific antigen 2 1 GESS(0.001)S(0.048)PS(0.792)PS(0.159)AEK 138.02 1.8192e-08 8876400.0 2901.5 3008.0 3067.6 2871.5 4278.9 3195.5 3348.3 2659.4 4429.2 4919.5 4567.3 True False 3391.2022651357356 3161.094351793206 3502.6318071554997 3575.017628906535 3649.4794782245526 3533.6456889987708 3956.6427689027887 3036.3780940709266 3425.9932719789986 3808.1815332588635 3433.1133589326546 0.9877921031393064 0.9207660864353111 1.0202493890980804 1.0413339890466062 1.0630232959622299 1.0292831373611768 1.1524940644933723 0.8844386353193208 0.9979260553878507 1.1092501572516722 1.0 11.745301779495831 -5.777901827019791 24.61157606046501 1.0117618318077297 0.9542790872976099 0.10452301934571351 0.06874064199100316 278.45915938932455 416302.21777350386 0.008270420459283216 0.02582507538892414 1.6676241391198479e-06 5.777901827019791 -0.05748274451011981 GESSSPS(ph)PSAEK ddPTM_A549_PD325901_60min_R1 2 GESSSPSPSAEK 12 0 E9PHV5;P28290-3;P28290;P28290-2 E9PHV5 SSFA2 Sperm-specific antigen 2 1 GESS(0.001)S(0.007)PS(0.949)PS(0.043)AEK;GESS(0.002)S(0.041)PS(0.824)PS(0.133)AEK 187.62 2.186e-19 23574000.0 9659.0 10859.0 10871.400000000001 10468.5 13366.0 10251.900000000001 10043.4 9073.3 8637.3 8838.0 9834.9 True False 10639.574569420016 11774.126039663815 11609.198579038917 11115.1154693115 12427.218270196774 10168.411925406614 10425.607082959354 8892.325913633847 8274.304318019844 8279.96717169749 8625.269648567772 1.2335352983644656 1.3650733854586115 1.3459519588430058 1.2886687514931394 1.4407918565491245 1.1789094532360598 1.2087282494049945 1.0309620772389905 0.9593096395999393 0.9599661818192989 1.0 13.07435384457887 -8.021620616009008 1.390489530081819 0.9793884797699224 1.329934027585354 0.8639454997396395 0.06060355352577825 0.09028535310233594 0.348125280770987 0.009942637088748327 0.014232015780724614 9.514355705237882e-09 8.021620616009008 0.35054554781543157 GESSSPSPS(ph)AEK ddPTM_A549_MK2206_60min_R1 1 GESSSPSPSAEK 12 0 E9PHV5;P28290-3;P28290;P28290-2 E9PHV5 SSFA2 Sperm-specific antigen 2 1 GESS(0.014)S(0.097)PS(0.283)PS(0.606)AEK 126.32 1.8848e-06 8044300.0 2479.9 2824.5 2185.4 2408.7 3163.5 2440.9 2306.1 3039.1 3808.7 3707.1 3051.0 True False 2898.4464922661077 2968.254985585077 2495.3225816135187 2998.8316081306502 2698.153340663111 2699.1944178617123 2725.0885193580984 3469.901731853409 2946.0355312441093 2869.6635353072334 2293.3524966837126 1.2638469212462486 1.294286416884148 1.0880676150839714 1.3076191350728208 1.176510520979552 1.1769644752670445 1.1882554135479368 1.5130259028522817 1.2845977822878099 1.2512963181442416 1.0 11.163242404139401 -10.660930037907203 1.0153980632769108 1.0052431809356266 1.2526844863875186 0.010936264549003982 0.12554119990049187 0.37888133759241766 0.7171500214912205 0.0638961975451244 0.01855278382217236 2.183081564143092e-11 10.660930037907203 0.24744130545189202 GETEERKDS(ph)DDEK ddPTM_A549_MK2206_60min_R1 1 GETEERKDSDDEK 13 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 GETEERKDS(1)DDEK 80.585 0.00013835 20589000.0 3595.0 3158.3 3261.9 3127.7 1122.7 755.38 500.07 543.43 1251.0 5343.8 4912.2 True False 4201.748110688602 3319.0439798099987 3724.486468822702 3893.9866404077866 957.5523172316966 835.3138102193373 590.9262459890743 620.4628666845769 967.6504974364967 4136.631868569719 3692.365170176902 1.1379557321756706 0.8988937515221396 1.0086993829606135 1.0546049648229199 0.25933304889933734 0.22622730193810087 0.1600400336245082 0.1680394105371897 0.26206793013111873 1.1203203577969867 1.0 11.850329525389835 -6.745434501569634 24.842577342864733 0.5137009406137897 1.0148612225924722 0.4230880318380592 0.3147746086739428 225.57720913889443 350136.04972523986 0.052557143492142105 0.10912686547369775 1.7970720864384933e-07 6.745434501569634 0.5011602819786826 GETEERKDS(ph)DDEK ddPTM_A549_PD325901_60min_R1 2 GETEERKDSDDEK 13 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 GETEERKDS(1)DDEK;GET(0.004)EERKDS(0.996)DDEK 118.48 2.8e-06 74688000.0 12843.7 12348.400000000001 13980.6 11998.3 14424.0 12934.4 14012.900000000001 14590.8 13879.2 13767.2 14404.099999999999 True False 14147.582968967787 13389.043004713561 14929.407588177384 12739.407740883622 13410.908000098636 12829.06653478666 14546.168577653114 14299.775047738824 13295.905490218118 12897.93664247495 12632.487015113007 1.119936474270045 1.0598897104501623 1.181826474099394 1.0084639489945804 1.0616205648226162 1.0155614266168231 1.1514889000282094 1.1319841477478774 1.0525168539109855 1.0210132515508916 1.0 13.624851076565145 -9.520004045803825 1.1970199676297175 1.0117518430115948 1.0878985600309599 0.2474781054087356 0.05224714039145329 0.3834720703902144 1.1354080063321148 0.013457046821583806 0.010145441234088443 3.019923587243941e-10 9.520004045803825 0.07614671701936504 GETEERKDS(ph)DDEKSDR ddPTM_A549_MK2206_60min_R1 4 GETEERKDSDDEKSDR 16 3 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 GETEERKDS(1)DDEKSDR;GETEERKDS(0.998)DDEKS(0.002)DR;GET(0.003)EERKDS(0.959)DDEKS(0.039)DR;GETEERKDS(1)DDEKSDR 177.61 5.367e-29 1026830000.0 22554.8 25514.7 25542.0 23501.4 9940.099999999999 3454.0699999999997 2813.75 2978.9500000000003 7242.84 38114.7 36928.0 True False 26361.498828083244 26813.28924790495 29164.239672175587 29259.244055017938 8477.92445757085 3819.5773947738953 3324.971953230061 3401.2252851517605 5602.348304438808 29504.56279819121 27757.758439048226 0.9496984018348976 0.9659745871332808 1.0506698419548457 1.0540924664095894 0.3054253993955265 0.1376039568598848 0.11978531913991501 0.12253241891344825 0.2018299970705741 1.0629303105644752 1.0 14.760603448206227 -6.752730610021632 24.921094302162857 0.48209428507911467 1.0055679952158587 0.4325817448496593 0.31675355571096653 184.02931639639 526615.5307358408 0.055302327815439915 0.11373068915893467 1.76713362202335e-07 6.752730610021632 0.523473710136744 GETEERKDS(ph)DDEKSDR ddPTM_A549_PD325901_60min_R1 7 GETEERKDSDDEKSDR 16 3 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 GETEERKDS(0.956)DDEKS(0.044)DR;GETEERKDS(0.995)DDEKS(0.005)DR;GETEERKDS(0.999)DDEKSDR;GETEERKDS(0.999)DDEKS(0.001)DR;GETEERKDS(0.997)DDEKS(0.003)DR;GETEERKDS(0.963)DDEKS(0.036)DR;GET(0.017)EERKDS(0.981)DDEKS(0.002)DR 193.59 5.9916999999999995e-36 2393871300.0 27995.2 27757.449999999997 28223.8 27228.109999999997 32848.08 32772.74 33099.79 33959.68 32980.28 30336.969999999998 33383.58 True False 30837.25209502302 30096.66772627923 30139.236791496827 28909.92851517557 30540.94418052413 32505.84967120731 34359.42062135007 33282.32754154644 31594.2335236131 28421.488536860303 29277.61129594952 1.053270766638304 1.0279755210235688 1.029429501158331 0.987441503439018 1.043150135159742 1.1102630382863377 1.1735732220102126 1.1367842548736535 1.079126066817619 0.9707584491632465 1.0 14.837510231256541 -4.85460590335937 14.754584690366471 1.0532123233314377 1.0604584538933712 0.0 0.06079554396061616 3262947.194082058 9496807.43369264 0.00868121202330509 820430.4109826531 1.3976360581207484e-05 4.85460590335937 0.0072461305619335725 GETEERKDSDDEKS(ph)DR ddPTM_A549_PD325901_60min_R1 1 GETEERKDSDDEKSDR 16 3 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 GETEERKDS(0.013)DDEKS(0.987)DR 49.224 0.0068203000000000005 6069400.0 287.52 259.82 262.53 437.96 405.33 276.46 539.88 512.28 550.01 650.48 549.75 True False 316.70881873896286 281.71594323836933 280.346864521137 465.011794520673 376.8610191125887 274.2086014200208 560.425428833672 502.06217352411414 526.8949924112968 609.4085817883889 482.134235152379 0.6568892968964685 0.5843101831367207 0.5814705616839947 0.9644861547193502 0.781651647270975 0.5687391216542772 1.1623846389098442 1.0413327594657054 1.0928387863698812 1.2639811433340442 1.0 8.913291065331244 -7.763221403161162 24.999999940226367 1.0528087142756866 0.6965708742087245 0.7183250784717345 0.12930133605484612 20.34371896232216 285403.9433831819 0.01813452874769003 0.025764402213235994 1.724958284722165e-08 7.763221403161162 -0.356237840066962 GETSTAT(ph)PR ddPTM_A549_MK2206_60min_R1 1 GETSTATPR 9 0 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 GET(0.003)S(0.019)T(0.016)AT(0.962)PR 53.327 0.023409 4094600.0 316.59 553.25 287.97 384.01 602.15 428.08 340.33 379.31 293.79 700.32 642.2 True False 370.0226521176368 581.4080618781882 328.8084761724375 478.09246723886395 513.5745326632815 473.3791414634938 402.1635556971257 433.0783540881567 227.24703408622554 542.1172256066363 482.7240161816716 0.7665304391617012 1.2044316056141222 0.6811520975759605 0.990405389440859 1.0639092223453814 0.9806413718710426 0.8331127978222919 0.8971551850968382 0.47075974359788614 1.123037610381938 1.0 8.915054794399152 -8.194667281476095 2.288056744035353 0.7515745808702727 0.950574362831258 0.0 0.20985267045603045 0.46542225327053954 4.777976694028132 0.03750430172510052 0.04907695426731473 6.387526553171768e-09 8.194667281476095 0.19899978196098522 GETSTAT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GETSTATPR 9 0 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 GET(0.001)S(0.001)T(0.009)AT(0.99)PR;GETST(0.001)AT(0.998)PR 91.584 0.0010907 11531300.0 1309.95 943.98 1055.6599999999999 1070.4899999999998 1252.58 1048.3600000000001 991.26 1140.48 1378.95 1198.49 1101.79 True False 1442.9351596657782 1023.5325074980982 1127.3034357992742 1136.6117360408145 1164.6031019664124 1039.8225037426507 1028.9829417382853 1117.732231710748 1320.9975269277966 1122.8171368644169 966.276814822263 1.49329378241492 1.0592539237178809 1.1666464707700044 1.176279631887766 1.2052479000860945 1.076112442927564 1.064894578814412 1.1567412304271667 1.3671005106034557 1.162003599425024 1.0 9.916292735111636 -11.154896248769518 1.5530781559166336 1.0004144121031098 1.209070123223821 0.04925963679266743 0.13331324679671822 0.4479065123240145 1.9439093153725002 0.094521103615966 0.02030107060832066 7.000092054534687e-12 11.154896248769518 0.20865571112071124 GEVDS(ph)NGSDGGEASR ddPTM_A549_MK2206_60min_R1 1 GEVDSNGSDGGEASR 15 0 Q7LBC6 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 GEVDS(0.499)NGS(0.499)DGGEAS(0.003)R 48.111999999999995 0.027638 4790300.0 0.0 225.45 279.43 0.0 310.7 305.52 248.46 259.53 205.37 559.12 326.45 True False 0.0 236.9244420251922 319.05737575741995 0.0 264.99644158180126 337.8499236122376 293.6019658816673 296.319172277291 158.85402290849973 432.8144036742953 245.38345543834737 0.0 0.9655273685911538 1.3002399660053006 0.0 1.0799279075617292 1.376824378842943 1.1965026955757203 1.2075760028236346 0.6473705516320428 1.7638287915586062 1.0 7.938894170798008 GEVDSNGS(ph)DGGEASR ddPTM_A549_PD325901_60min_R1 1 GEVDSNGSDGGEASR 15 0 Q7LBC6 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 GEVDS(0.16)NGS(0.835)DGGEAS(0.005)R 62.378 0.0048735 5787700.0 288.27 340.5 335.43 157.69 362.91 228.41 334.46 246.92 384.61 407.02 337.7 True False 317.5349581868424 369.19512998485413 358.19429690444906 167.43015316002592 337.4204535715331 226.5499046890942 347.18805832353456 241.99498689500732 368.44617921730315 381.32068773753207 296.16504085667736 1.0721554349167988 1.246585785131602 1.2094415190541998 0.5653271995767053 1.1392987254522737 0.7649447890061005 1.1722790013273332 0.817095043341444 1.2440569560524353 1.2875276792782033 1.0 8.21025754559639 -8.780293998901334 24.997917044445163 1.1152490840495197 1.001975252913091 0.10487320983463 0.21239808743622085 570.5378071834845 756430.0960475643 0.035981322384666586 0.03833526953030156 1.6584638178391486e-09 8.780293998901334 -0.11327383113642875 GEVFNELVGK ddPTM_A549_PD325901_60min_R1 1 GEVFNELVGK 10 0 P05556;P05556-2;P05556-5;P05556-4;P05556-3 P05556 ITGB1 Integrin beta-1 0 102.06 0.0011316 1649500.0 3413.2 2652.2 2780.8 3345.2 3972.5 3211.1 3237.6 4167.9 3380.8 3480.4 3624.5 False True 3759.705551334961 2875.71020189671 2969.521810308833 3551.825406499579 3693.4853043810185 3184.949866236811 3360.808639682698 4084.767964845704 3238.7167330486955 3260.646950031219 3178.7094775985397 1.1827773433938837 0.904678525094171 0.9341910077772366 1.117379688685146 1.1619449120500887 1.0019631830723283 1.0572871359800176 1.2850397287428972 1.0188778672203445 1.0257769616915673 1.0 11.634225450121624 -4.255852349066059 16.145204799873838 1.04026574067181 1.0495709910380029 0.0 0.1106417212918921 0.0 0.0 0.01424144791805633 0.0 5.5481430602114566e-05 4.255852349066059 0.009305250366192785 GEVLGLSSS(ph)LGK ddPTM_A549_MK2206_60min_R1 2 GEVLGLSSSLGK 12 0 F1LLU8;Q9NQG7-2;Q9NQG7-3;Q9NQG7;Q9NQG7-4 F1LLU8 HPS4 Hermansky-Pudlak syndrome 4 protein 1 GEVLGLS(0.004)S(0.159)S(0.837)LGK;GEVLGLS(0.002)S(0.156)S(0.842)LGK 162.68 3.8847000000000004e-14 7456000.0 3064.5 3728.3 3191.4 3872.5 5138.4 3532.2 3895.8 4389.1 5789.6 5242.1 6047.200000000001 True False 3581.7126801683507 3918.0545451431562 3643.9885087221473 4821.26267384313 4382.548166797323 3905.9750595153996 4603.616431947997 5011.268366055013 4478.264844091395 4057.9059692034366 4545.513345770483 0.7879665964463769 0.8619608495460329 0.8016671014975265 1.0606640674213896 0.9641481244082593 0.8593033970849162 1.0127825136035684 1.1024647789710937 0.9852055210130092 0.8927277648363399 1.0 12.15022751848213 -6.251821462438988 24.993120584797293 0.9941158365553342 0.8216744356578273 0.551435522546639 0.0668391116692764 332.58856853646375 864262.6210385652 0.008203602485562046 0.021399968840993627 5.599877639908626e-07 6.251821462438988 -0.17244140089750692 GEVLGLSSS(ph)LGK ddPTM_A549_PD325901_60min_R1 2 GEVLGLSSSLGK 12 0 F1LLU8;Q9NQG7-2;Q9NQG7-3;Q9NQG7;Q9NQG7-4 F1LLU8 HPS4 Hermansky-Pudlak syndrome 4 protein 1 GEVLGLS(0.001)S(0.113)S(0.886)LGK;GEVLGLS(0.003)S(0.182)S(0.814)LGK 188.48 1.9075e-19 14771600.0 5355.6 5832.0 6396.9 5947.299999999999 7130.7 6611.9 6070.9 6960.3 6259.799999999999 6675.1 6810.1 True False 5899.29656941566 6323.483107405777 6831.032101684614 6314.651213701707 6629.864231579539 6558.05487856846 6301.931421623949 6821.471356250281 5996.722375040878 6253.633046820305 5972.500872780743 0.987743107129761 1.058766376447865 1.1437473593041347 1.057287616730253 1.1100650084112476 1.098041677726049 1.0551578904482983 1.1421465649906661 1.0040555041809243 1.047071098025419 1.0 12.544119444169372 -8.839433575047078 11.351258164693158 1.001846104331142 1.0827149685630892 0.2828556314246632 0.04399515899245775 0.3232483444526346 45.47392254329738 0.006895635681911292 0.007337375770930121 1.4473262034163126e-09 8.839433575047078 0.08086886423194728 GEVPPKET(ph)PK ddPTM_A549_MK2206_60min_R1 6 GEVPPKETPK 10 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GEVPPKET(1)PK;GEVPPKET(1)PK;GEVPPKET(1)PK;GEVPPKET(1)PK;GEVPPKET(1)PK;GEVPPKET(1)PK 99.01100000000001 0.00019107 800349100.0 105053.90000000001 106909.2 100679.9 94587.90000000001 132189.5 109635.59999999999 103579.6 114519.3 149943.8 158165.7 153853.9 True False 122784.4299987394 112350.4216338863 114957.82373231027 117761.9397462124 112744.59966037181 121237.16642177888 122398.67256394077 130752.76147564744 115981.76871104584 122435.95851915072 115647.73047837646 1.0617106750892733 0.971488339366014 0.99403441171554 1.0182814592131686 0.9748967765645218 1.0483315662164898 1.0583750503156357 1.1306124290964386 1.0028884114827643 1.0586974600599146 1.0 16.819377428610494 -4.327576112563572 13.450957915784647 1.015017699125824 1.0291339383645555 0.0 0.0474514735211238 0.0 0.0 0.006087064020310334 0.0 4.7035296648533584e-05 4.327576112563572 0.01411623923873151 GEVPPKET(ph)PK ddPTM_A549_PD325901_60min_R1 4 GEVPPKETPK 10 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GEVPPKET(1)PK;GEVPPKET(1)PK;GEVPPKET(1)PK;GEVPPKET(1)PK 118.37 2.6359e-05 1096243200.0 181244.0 169961.0 176896.9 178912.4 224996.6 172681.19999999998 175913.4 182972.1 202536.4 207313.4 212682.69999999998 True False 199643.75745521882 184284.20994818138 188902.18740147486 189963.41260845854 209193.61501213216 171274.94155946947 182607.8807005063 179322.57792666394 194024.4994473032 194223.59654367392 186524.07620671703 1.070337736099879 0.9879915434828194 1.0127496205483 1.0184391016521097 1.1215367971065109 0.9182457570230903 0.9790043431075859 0.9613910524233239 1.0402115554898863 1.041278962445705 1.0 17.50900233752963 -7.259812773465308 24.999175597459057 1.0050026442449906 1.0362413642493782 0.19532921431007022 0.04702031435984165 306.1609707295155 4705420.972685094 0.007085760722427189 0.01189207450840214 5.497778347651727e-08 7.259812773465308 0.031238720004387543 GEVPPKET(ph)PKK ddPTM_A549_MK2206_60min_R1 2 GEVPPKETPKK 11 2 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GEVPPKET(1)PKK;GEVPPKET(1)PKK 58.21 0.004075 35205000.0 10767.9 12604.5 12805.400000000001 10965.2 14644.6 12624.6 12275.1 12241.7 16057.4 17328.5 16864.2 True False 12585.258270120663 13246.015211827618 14621.398273356703 13651.67449224653 12490.398739584309 13960.526792468749 14505.326778531968 13976.998463633934 12420.42453839871 13413.979814834072 12676.353711757938 0.9928137504120936 1.0449389085397083 1.1534388047088526 1.0769401677064228 0.9853305629992679 1.1013046109244866 1.1442822682580691 1.102604012277567 0.979810505514544 1.0581891386000022 1.0 13.629852200857425 -8.767482795854836 24.999583591101974 0.9904660663334124 1.0770398208407177 0.17590347721670996 0.05471132044046278 113.58460189356941 469860.0126880848 0.00899247786943318 0.009694676642621762 1.7081153840162965e-09 8.767482795854836 0.08657375450730531 GEVPPKET(ph)PKK ddPTM_A549_PD325901_60min_R1 1 GEVPPKETPKK 11 2 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GEVPPKET(1)PKK 49.31 0.009889499999999999 18644000.0 6562.0 5235.6 5928.3 5561.4 6550.0 6421.8 5218.5 6113.3 6161.0 6726.4 6831.6 True False 7228.169409310923 5676.822386339797 6330.630087763895 5904.915047144194 6089.950596273298 6369.502989941006 5417.092873172773 5991.365435708924 5902.074595454625 6301.693956065394 5991.3565090804705 1.2064328668066981 0.9475020185722604 1.056627172522487 0.9855723054027471 1.0164560541579188 1.063115336282763 0.9041513161439573 1.0000014899177574 0.9850982138201039 1.0517975264056774 1.0 12.548666966701214 -5.253443294684998 24.805180954470217 0.9949682591805918 1.2064329826551003 0.6241532794535055 0.04560129137936566 358.73411324927037 1112823.9566145479 0.005159090851901613 0.07854217757456054 5.579004417842698e-06 5.253443294684998 0.2114647234745085 GEWNRKS(ph)PNLSK ddPTM_A549_MK2206_60min_R1 1 GEWNRKSPNLSK 12 2 K7ENY6;K7EJR3;R4GMR5;P48556 K7ENY6 PSMD8 26S proteasome non-ATPase regulatory subunit 8 1 GEWNRKS(0.995)PNLS(0.005)K 42.647 0.016611 14840000.0 3571.3 3939.1 3451.7 3608.2 5415.9 4423.4 3800.8 3683.2 5684.3 5843.3 6299.1 True False 4174.048130097966 4139.583364743556 3941.202962823915 4492.209161978254 4619.228284399347 4891.4812519847155 4491.356161647912 4205.304879326932 4396.815125961851 4523.294471651901 4734.85962368416 0.8815568911946262 0.874277949875645 0.8323801075558167 0.9487523430489578 0.9755787185946515 1.0330784100793866 0.9485721898030041 0.888158301101821 0.9286051700389631 0.9553175450072495 1.0 12.20910593882105 -6.360793683635616 5.456922848463947 0.9637309501203477 0.8642965628487859 0.577879294060808 0.036937645119718455 0.1366321192984521 6.048102160399473 0.006076691198775228 0.014374266345763786 4.3571881753687504e-07 6.360793683635616 -0.09943438727156184 GEWNRKS(ph)PNLSK ddPTM_A549_PD325901_60min_R1 2 GEWNRKSPNLSK 12 2 K7ENY6;K7EJR3;R4GMR5;P48556 K7ENY6 PSMD8 26S proteasome non-ATPase regulatory subunit 8 1 GEWNRKS(0.993)PNLS(0.007)K;GEWNRKS(1)PNLSK 60.246 0.0018124000000000003 33940000.0 10959.0 9985.8 9326.599999999999 10551.599999999999 10912.8 12774.7 9998.099999999999 10143.7 12271.9 13511.0 14633.5 True False 12071.549612410592 10827.338411168148 9959.559161401878 11203.348367577708 10146.322575116215 12670.667078638293 10378.58316667025 9941.375945921294 11756.154719681808 12657.913154198308 12833.672269399418 0.9406153873193389 0.8436664256250981 0.7760490491213049 0.8729651289515121 0.7906016580545762 0.9872986322745833 0.8086994079953969 0.774632212607259 0.9160398109676807 0.9863048462270468 1.0 13.647646426578016 -9.452587424103248 1.1337608612434202 0.9813857775904515 0.8498537551927566 0.396347791743464 0.06564053997070139 0.287188561353483 0.7686070551104556 0.016774398081258416 0.012885878345678265 3.5270577929199836e-10 9.452587424103248 -0.1315320223976949 GFADIPTGKT(ph)SPYILR ddPTM_A549_MK2206_60min_R1 2 GFADIPTGKTSPYILR 16 1 P49454 P49454 CENPF Centromere protein F 1 GFADIPT(0.041)GKT(0.558)S(0.4)PY(0.001)ILR;GFADIPT(0.162)GKT(0.512)S(0.326)PYILR 89.374 4.5617e-06 21751000.0 4202.3 5563.3 5517.4 4646.2 7446.0 4986.3 4944.2 4517.5 8419.7 7734.200000000001 8128.9 True False 4911.545503629125 5846.448207224449 6299.850284522023 5784.519208575842 6350.7032636565555 5513.946956361941 5842.497141238588 5157.86945926352 6512.651393498053 5987.038848364817 6110.269783773265 0.8038181090911024 0.9568232523464949 1.031026535236172 0.9466880208689799 1.0393490776007628 0.9024064650966889 0.9561766252538002 0.8441312154433858 1.0658533295523829 0.9798321613006833 1.0 12.577020364725609 -8.79277489189379 24.994825572376275 1.031097410343187 0.9424575103314533 0.19508228743699985 0.06937458036782623 193.59961646907928 154424.19827855524 0.01172065186434785 0.012478158784015494 1.6114806984486034e-09 8.79277489189379 -0.08863990001173361 GFADIPTGKT(ph)SPYILR ddPTM_A549_PD325901_60min_R1 2 GFADIPTGKTSPYILR 16 1 P49454 P49454 CENPF Centromere protein F 1 GFADIPT(0.023)GKT(0.695)S(0.282)PYILR;GFADIPT(0.022)GKT(0.639)S(0.338)PYILR 131.48 1.6337e-10 36987000.0 7048.0 6949.1 8035.1 8927.7 8700.5 10829.2 8861.3 10539.6 9918.5 9055.599999999999 9911.2 True False 7763.507771536632 7534.725044868574 8580.41020498148 9479.143752722199 8089.406895095543 10741.010585609823 9198.521620589418 10329.379409843745 9501.659937512857 8483.82787056163 8692.18523227332 0.8931594948887434 0.8668389873806188 0.9871407448984372 1.0905363265300618 0.9306528426315959 1.2357088923656845 1.0582519095930119 1.1883524262105767 1.0931267205666568 0.9760293463445675 1.0 13.085503203639947 -5.948971774723752 3.0250701390867345 1.064227111349188 0.8787767021659395 0.4372997031177521 0.08362204853034468 0.17623412271113537 3.2503678347009655 0.011359982645117214 0.04101892978870086 1.1246780656567548e-06 5.948971774723752 -0.1854504091832484 GFAFVQYVNER ddPTM_A549_MK2206_60min_R1 2 GFAFVQYVNER 11 0 G3V4C1;G3V2Q1;G3V576;G3V575;G3V555;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;P07910-2;P07910;B2R5W2;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 73.327 0.0041963 5072300.0 5214.0 5123.1 5764.0 4508.9 7182.2 4967.0 5288.4 5642.200000000001 7817.4 6660.0 7029.6 False True 6093.995729938905 5383.843907470672 6581.421872618436 5613.580702412213 6125.707894202812 5492.60464317224 6249.233825841617 6441.999128512816 6046.771381822591 5155.501374429118 5283.956312909811 1.1533016870427182 1.0189039402761175 1.245548123957544 1.0623821186214317 1.1593032817543223 1.0394871414346591 1.1826808277300536 1.2191620723232826 1.1443643784580626 0.9756896289685723 1.0 12.367402823273906 -10.601218764474233 0.9445512523239367 1.002018629896001 1.1345903783890092 0.4011390850073189 0.06871438941471035 0.4632028160793595 0.754217263465522 0.03991548448658613 0.011627796223309948 2.504847184006544e-11 10.601218764474233 0.13257174849300823 GFAFVQYVNER ddPTM_A549_PD325901_60min_R1 2 GFAFVQYVNER 11 0 G3V4C1;G3V2Q1;G3V576;G3V575;G3V555;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;P07910-2;P07910;B2R5W2;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 108.43 0.00033356 10892400.0 9715.099999999999 10101.3 11089.5 11151.099999999999 13359.7 12517.0 11621.1 12082.5 13434.0 12775.1 10760.2 False True 10701.369800121378 10952.572001515435 11842.100156580766 11839.878121014417 12421.360760462952 12415.065701998124 12063.347319809933 11841.505058962122 12869.415697993423 11968.478005787789 9436.76361452774 1.1340084627792095 1.1606279916404956 1.25488998562495 1.254654519774886 1.3162733822579253 1.315606304144923 1.2783352230248315 1.2548269240030898 1.3637531068576492 1.2682820609559953 1.0 13.204076449563999 -10.912884811597237 1.1431599784721234 0.9986775812915437 1.268261933918516 0.0 0.09975518990582863 0.24016832404349903 0.5529976537586873 0.051534222145629464 0.011977807651262568 1.2221237624106988e-11 10.912884811597237 0.2695843526269722 GFAFVTFES(ph)PADAKDAAR ddPTM_A549_PD325901_60min_R1 1 GFAFVTFESPADAKDAAR 18 1 P38159;H0Y6E7;H3BT71;Q96E39;H3BR27;A0A1B0GUK8;P38159-3 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 GFAFVT(0.023)FES(0.977)PADAKDAAR 53.169 0.0037671999999999996 3244600.0 1945.6 2335.7 2191.3 2328.5 2481.8 2431.2 2272.5 2534.8 2470.8 2148.9 2341.8 True False 2143.1158797249814 2532.5376361398626 2340.01479535736 2472.326156592812 2307.486929745203 2411.40111326179 2358.981231059715 2484.241425487869 2366.9608684384507 2013.218087266431 2053.773445893299 1.0435016014109688 1.2331144124995357 1.1393733812443751 1.2037969239189676 1.1235352829978527 1.1741319949790952 1.148608302330866 1.2095985710864694 1.1524936565770667 0.9802532461854728 1.0 11.004061329749021 -10.457713826141033 0.7316910400832481 0.9961269640402134 1.1627347352496367 0.6278262113007141 0.04939322268732315 0.3454099762905868 0.3248000907028031 0.032549115454196566 0.008780859238748107 3.485669239494277e-11 10.457713826141033 0.16660777120942327 GFAS(ph)PLGAGR ddPTM_A549_MK2206_60min_R1 2 GFASPLGAGR 10 0 Q8TDN4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 GFAS(1)PLGAGR;GFAS(1)PLGAGR 112.89 0.00012201 12025800.0 2751.1000000000004 2447.6 2777.7 2438.1000000000004 3570.8 2545.8 2490.3 2704.2 3808.0 3985.1 3585.0 True False 3215.4184220627008 2572.172385455136 3171.6196279618703 3035.4346094504676 3045.540050210157 2815.194866234728 2942.755275034679 3087.5286312651724 2945.4940801264393 3084.8631422278504 2694.745559033469 1.1932178202442174 0.9545140085053906 1.1769644140723412 1.1264271683368854 1.1301772221131365 1.0446978405057512 1.0920345578341595 1.1457588717105387 1.0930509079984927 1.144769728587773 1.0 11.395933343150013 -10.404539391003919 0.6680905855508817 0.9956989476414841 1.1050453336979194 0.0 0.07521571572573074 0.7814266089352612 0.6065706295091858 0.0459605393968903 0.012106100562887629 3.939676927059405e-11 10.404539391003919 0.10934638605643521 GFAS(ph)PLGAGR ddPTM_A549_PD325901_60min_R1 2 GFASPLGAGR 10 0 Q8TDN4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 GFAS(1)PLGAGR;GFAS(1)PLGAGR 123.96 2.506e-05 20078200.0 4298.5 4404.2 5141.4 5764.799999999999 5941.799999999999 4795.6 4760.8 5258.200000000001 4846.9 5531.6 6320.7 True False 4734.880555611548 4775.357390541246 5490.3263217497915 6120.878603189276 5524.468466097203 4756.546223576115 4941.974849209722 5153.321076021899 4643.201648548777 5182.33383197124 5543.293970218535 0.8541637122349626 0.8614656585411049 0.9904447339878937 1.104195201638922 0.9966039138060381 0.8580721587436569 0.8915231405299066 0.9296496097281195 0.8376250066286357 0.9348834573474615 1.0 12.436527802864394 -7.241117408118419 24.646006524658286 0.9153366123158566 0.9653736205054161 0.10502781908568404 0.07488176062341374 1644.898918593551 1994893.662383465 0.013296276046280569 0.02300833002300963 5.739612752872147e-08 7.241117408118419 0.05003700818955947 GFDNPEENS(ph)SEFPVTFKEESK ddPTM_A549_MK2206_60min_R1 2 GFDNPEENSSEFPVTFKEESK 21 1 Q8IWI9-3;Q8IWI9;H3BU53 Q8IWI9-3 MGA MAX gene-associated protein 1 GFDNPEENS(0.982)S(0.018)EFPVTFKEESK;GFDNPEENS(0.944)S(0.056)EFPVTFKEESK 72.95100000000001 0.00010400000000000001 4714300.0 2040.9499999999998 2062.43 1893.8899999999999 1825.47 3064.9 2594.3 1811.25 1963.0900000000001 3089.1000000000004 3132.5 2794.8 True False 2385.4124635632534 2167.3988776492224 2162.4720802105007 2272.7102319484616 2614.057270048481 2868.8271040430327 2140.3306798002486 2241.3640192109874 2389.423782279043 2424.8660743842665 2100.7740274440002 1.1354921721236106 1.0317144296982215 1.0293692000950565 1.0818442165879474 1.2443305352689407 1.3656048040224098 1.0188295608378102 1.066922948365866 1.1374016201001118 1.1542726836425083 1.0 11.036705269605406 -10.792123330807842 0.6975410487968969 0.9857624503219021 1.1251224792884171 0.0 0.10848900126293431 1.4524239212747616 1.0382924206675477 0.12236318692837764 0.02067797665017146 1.613900176889064e-11 10.792123330807842 0.139360028966515 GFEGS(ph)CSQKESEEGNPVR ddPTM_A549_MK2206_60min_R1 2 GFEGSCSQKESEEGNPVR 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 GFEGS(0.532)CS(0.467)QKES(0.001)EEGNPVR;GFEGS(0.54)CS(0.46)QKESEEGNPVR 86.625 4.1412e-06 12890500.0 4631.5 4918.4 4590.8 4909.9 6684.0 5899.6 5351.5 4908.5 7489.799999999999 7660.1 7704.9 True False 5413.183970696594 5168.725551815057 5241.844471342243 6112.825720413784 5700.792454241258 6523.891756162462 6323.79827906199 5604.294906650801 5793.372258752895 5929.678089829502 5791.560685577957 0.9346675731424882 0.8924581528923847 0.905083233332147 1.0554712369043868 0.9843275006057127 1.1264479663328304 1.0918988200899633 0.9676657486481179 1.0003127953367472 1.0238480457600112 1.0 12.499736456700687 -6.248780171117502 24.4808436192458 1.0152393599553877 0.9089084866923723 0.5467533467656363 0.04725111949376458 392.713702206904 759442.0214348664 0.006900722568363238 0.018109421428102578 5.639230271695098e-07 6.248780171117502 -0.10633087326301538 GFEGSCS(ph)QKESEEGNPVR ddPTM_A549_PD325901_60min_R1 2 GFEGSCSQKESEEGNPVR 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 GFEGS(0.229)CS(0.77)QKES(0.001)EEGNPVR;GFEGS(0.029)CS(0.97)QKES(0.001)EEGNPVR 140.59 3.7722e-17 38545000.0 17034.2 19608.3 16096.099999999999 16801.3 15771.300000000001 16620.5 16551.9 15585.599999999999 18286.9 16834.0 20539.0 True False 18763.499444084748 21260.760256334823 17188.478139712304 17839.078142479193 14663.578296031312 16485.1481585092 17181.79161204721 15274.732981333322 17518.365187407755 15771.09836709158 18012.833207448297 1.0416739681088065 1.180311837204128 0.954235124578008 0.9903538181379897 0.8140628477017113 0.9151890748476259 0.9538639154745823 0.8479916959991184 0.9725491257068832 0.8755479044001939 1.0 14.13673749765451 -5.777522196458946 24.842057115082504 0.9575739025675073 1.1109928843647279 0.4663025613884635 0.06997553383048694 134.56535623109013 207855.14200583316 0.009587301740464186 0.029944636335809374 1.6690824995005562e-06 5.777522196458946 0.15341898179722058 GFENVIHDKLPLQES(ph)EEEEREER ddPTM_A549_MK2206_60min_R1 3 GFENVIHDKLPLQESEEEEREER 23 2 E9PHV6;P23497-7;P23497-6;P23497-5;P23497-2;P23497-3;P23497;P23497-4;C9JBL0 E9PHV6 SP100 Nuclear autoantigen Sp-100 1 GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER 206.95 2.7075999999999993e-62 128965000.0 8228.300000000001 9468.699999999999 9140.0 8901.1 12543.8 10520.3 7773.700000000001 9181.6 14487.7 13913.800000000001 14302.900000000001 True False 9617.035877379421 9950.616385912337 10436.189437149977 11081.86989958557 10698.623636671384 11633.55116319004 9186.080665597347 10483.119917470714 11206.259082102899 10770.662916446225 10751.095190041779 0.8945168568767969 0.9255444408239557 0.9707094256607937 1.0307666059779819 0.9951194224920455 1.082080565519096 0.8544320837291042 0.9750746070205688 1.0423365140030307 1.0018200681938498 1.0 13.392196010970004 -5.799443849159075 2.170870584224335 1.0085960020648022 0.8988046675324566 0.2639467374152392 0.05434294574956353 0.29099765123973964 2.5999147349175358 0.007684162805412688 0.04053867988522128 1.5869240824184172e-06 5.799443849159075 -0.10979133453234557 GFENVIHDKLPLQES(ph)EEEEREER ddPTM_A549_PD325901_60min_R1 4 GFENVIHDKLPLQESEEEEREER 23 2 E9PHV6;P23497-7;P23497-6;P23497-5;P23497-2;P23497-3;P23497;P23497-4;C9JBL0 E9PHV6 SP100 Nuclear autoantigen Sp-100 1 GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER 234.52 4.3885e-90 270976000.0 15324.7 16234.6 15324.2 17635.8 18944.0 17496.2 16347.399999999998 18519.3 19085.800000000003 17636.2 19116.2 True False 16880.452262552124 17602.746717333644 16364.192363900524 18725.12331219218 17613.438793252106 17353.716748046623 16969.509252640528 18149.918033390193 18283.690198657358 16522.647322187288 16765.028587575987 1.0068847884376215 1.0499681897577235 0.9760909310961444 1.116915680422326 1.0506059504309373 1.0351140564655459 1.0121968575237668 1.082605850540601 1.0905850892617506 0.9855424484293263 1.0 14.033167322753854 -6.211411131242488 24.99943632158347 1.0482745843105084 1.0148800409196734 0.12974893653956254 0.04070528114268256 672.1453024004163 335873.89347335533 0.005904041401649717 0.015620566077880666 6.145947820643348e-07 6.211411131242488 -0.03339454339083492 GFFDPNTHENLTYR ddPTM_A549_PD325901_60min_R1 1 GFFDPNTHENLTYR 14 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 95.98100000000001 5.1568000000000005e-05 4828200.0 964.89 1225.5 1054.1 1161.7 1387.0 1416.1 1248.4 1165.1 1341.8 1099.2 1723.1 False True 1062.8449224855246 1328.7771858926237 1125.637564818231 1233.455570587875 1289.5819048902388 1404.5677511064578 1295.908545150692 1141.8611664967318 1285.4088122351916 1029.7963244093546 1511.1696236308564 0.703326023674198 0.8793037956255353 0.7448783691890819 0.8162257573867031 0.8533667463429992 0.9294573747000893 0.8575533314632403 0.7556141604760459 0.8506052478389329 0.681456474710684 1.0 10.561449891846708 -14.99999999999992 0.16171883958897326 1.694438253624389 0.7756922937723849 0.0 0.11378885026006082 30.442918106380617 0.31636397730524407 6.670051789692115 0.09211185328161427 1.000000000000184e-15 14.99999999999992 -0.918745959852004 GFGDGYNGYGGGPGGGNFGGS(ph)PGYGGGR ddPTM_A549_MK2206_60min_R1 2 GFGDGYNGYGGGPGGGNFGGSPGYGGGR 28 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR 130.5 1.4095000000000001e-27 28707000.0 3298.3 3314.2 3423.0 2941.6 4250.1 3059.0 2891.7 3167.3 5041.7 4546.9 5020.4 True False 3854.97240430715 3482.8786239072615 3908.4328712652514 3662.292132053442 3624.9159200734275 3382.70134960014 3417.0844592289172 3616.2744744494407 3899.7629999405153 3519.7521320408036 3773.6961240088185 1.021537579504942 0.9229356337805441 1.0357041857184042 0.9704788122057291 0.9605744079421686 0.8963894384815165 0.9055006939983629 0.9582844923421794 1.0334067375297233 0.9327068254509457 1.0 11.881762539599361 -8.749547633628087 24.504728254421625 1.0157754028642179 0.9568599513882295 0.0 0.048153486811991685 163.20173471616963 336301.19183047046 0.007162566162071778 0.008088252117547162 1.7801326523387535e-09 8.749547633628087 -0.05891545147598831 GFGDGYNGYGGGPGGGNFGGS(ph)PGYGGGR ddPTM_A549_PD325901_60min_R1 2 GFGDGYNGYGGGPGGGNFGGSPGYGGGR 28 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR 168.68 2.3474999999999996e-57 70617000.0 9312.599999999999 9551.5 9131.8 8851.0 11310.6 10742.0 9551.7 9398.2 11545.7 11714.900000000001 13432.0 True False 10258.008296426222 10356.438425992166 9751.538861974317 9397.70616792053 10516.182475451724 10654.520713498749 9915.195170390798 9210.745528254729 11060.474380253287 10975.219214722654 11779.94915246339 0.8708024256862854 0.8791581603581419 0.8278082303891017 0.7977713694931619 0.8927188342958686 0.9044623686911845 0.8417010160283552 0.781900278943785 0.9389237794749182 0.9316864676302569 1.0 13.524045691413304 -8.958452880985572 4.595225711435089 0.9742642400997948 0.8509954408395074 0.5988309524848474 0.0391138004981889 0.08949812560032491 3.8684581472259296 0.007366768434370099 0.007635794765368574 1.1003912263600174e-09 8.958452880985572 -0.12326879926028744 GFGEYSRS(ph)PTF ddPTM_A549_MK2206_60min_R1 2 GFGEYSRSPTF 11 1 D6REL5;Q6UWZ7-2;Q6UWZ7 D6REL5 FAM175A BRCA1-A complex subunit Abraxas 1 GFGEYS(0.003)RS(0.963)PT(0.034)F;GFGEYS(0.003)RS(0.995)PT(0.002)F 138.0 1.9682999999999998e-08 71714000.0 6427.1 7301.3 6355.9 5584.700000000001 8163.8 6073.1 6366.700000000001 6761.2 8951.599999999999 10354.7 10273.2 True False 7511.837352491436 7672.904983626245 7257.2621929520255 6952.951750706707 6962.915834520464 6715.7514110024895 7523.446978100341 7719.620805306593 6924.07689276782 8015.566078348529 7722.0809141039435 0.9727737168321418 0.9936317773635496 0.9398065461470427 0.9003987173985103 0.9016890540220956 0.8696815645555526 0.9742771490983979 0.9996814189303744 0.8966594587375257 1.0380059685347962 1.0 12.91477395597953 -11.056400832094265 1.3440419720072447 1.0002222295573997 0.933920092393584 0.31367754970709627 0.043118008360573085 0.5404902401425469 1.731774041536813 0.032545809329229854 0.00712740444688887 8.782115972712069e-12 11.056400832094265 -0.06630213716381572 GFGEYSRS(ph)PTF ddPTM_A549_PD325901_60min_R1 2 GFGEYSRSPTF 11 1 D6REL5;Q6UWZ7-2;Q6UWZ7 D6REL5 FAM175A BRCA1-A complex subunit Abraxas 1 GFGEYS(0.001)RS(0.966)PT(0.033)F;GFGEYS(0.001)RS(0.999)PTF 128.57 9.2163e-08 109781000.0 15459.900000000001 15901.9 16263.5 15964.9 17488.7 17797.3 17002.6 18716.1 18764.9 17048.0 19492.9 True False 17029.377667023135 17242.00892072291 17367.238910370277 16951.01561408142 16260.354044739664 17652.364689476013 17649.643247179723 18342.792703003597 17976.276509697538 15971.586370570118 17095.396875674036 0.9961381880086772 1.0085761123953487 1.015901475506723 0.9915543779040273 0.9511539371090824 1.032579987341184 1.0324207958163496 1.0729667662237516 1.051527299449652 0.9342623916088751 1.0 14.061320295384256 GFGFGLVK ddPTM_A549_MK2206_60min_R1 2 GFGFGLVK 8 0 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 0 ; 106.76 0.0052101000000000005 3447600.0 1846.8400000000001 2154.16 2105.06 1995.04 2537.6 1969.6999999999998 1918.1799999999998 1823.96 2710.6 2838.2 2606.91 False True 2158.5414410971175 2263.797542838714 2403.5891615499927 2483.8248895607476 2164.322401538393 2178.1323466189583 2266.6884766759094 2082.51191564323 2096.6534279387415 2197.048648784492 1959.5422999441946 1.1015538889661072 1.1552685251567083 1.226607438695477 1.2675535963839535 1.1045040475013121 1.1115515835922445 1.156743835915388 1.0627542542472992 1.069970996797799 1.1212050124394157 1.0 10.93630100088419 -8.496775628864595 0.5140795414754334 1.0112136083508683 1.1831772840298733 0.3388181955263373 0.0581527218753476 0.37909982034195977 0.22874739546375913 0.017507225120384762 0.020693772364250882 3.1858430102765254e-09 8.496775628864595 0.17196367567900506 GFGFGQGAGALVHS(ph)E ddPTM_A549_MK2206_60min_R1 2 GFGFGQGAGALVHSE 15 0 E9PP21;P21291 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 1 GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E 173.72 2.3104e-27 193095000.0 8171.6 7838.5 7405.3 6741.700000000001 10843.400000000001 7583.4 7155.9 7627.5 12307.400000000001 10857.8 11186.8 True False 9550.766303561324 8237.446169059518 8455.482892661568 8393.416802646412 9248.350224165119 8385.870354546481 8456.034402530078 8708.721483239071 9519.793550879243 8405.015438930399 8408.808820026663 1.1358049050675219 0.9796210551773965 1.005550616458748 0.9981695365289323 1.099840705396819 0.9972720909737476 1.0056162036162533 1.0356664861375047 1.1321215352413088 0.9995488800878396 1.0 13.03768572947599 -8.54557754789014 24.984303125322267 1.063522473601363 1.028120048971426 0.0 0.056238147693195156 522.5723199816493 575185.8649646055 0.0104336377510467 0.011830957756950894 2.847229351754208e-09 8.54557754789014 -0.035402424629937146 GFGFGQGAGALVHS(ph)E ddPTM_A549_PD325901_60min_R1 2 GFGFGQGAGALVHSE 15 0 E9PP21;P21291 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 1 GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E 135.81 1.2571e-09 299400000.0 11249.3 10776.5 10645.7 10961.9 12130.6 12315.2 11535.0 12156.400000000001 11352.2 11900.1 12739.5 True False 12391.320654703035 11684.673475130037 11368.181219794564 11638.991666718797 11278.588504298144 12214.909094291552 11973.970737194193 11913.931065488689 10875.106512338909 11148.725655116232 11172.622262344208 1.1090789936097887 1.0458308891827148 1.0175034072448204 1.041742161636165 1.0094844557943288 1.0932893646158814 1.0717242967705818 1.0663504758093325 0.9733710007356075 0.997861146052658 1.0 13.447680211824334 -8.760137946022631 24.999988021969994 0.9874251926403551 1.0548195604734107 0.5153590986619194 0.028614815863552537 19.872393380194726 381735.89041881304 0.005036064003942818 0.005557653527828909 1.7372489344596425e-09 8.760137946022631 0.06739436783305564 GFGFGQGAGALVHSE ddPTM_A549_MK2206_60min_R1 2 GFGFGQGAGALVHSE 15 0 E9PP21;P21291 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 0 ; 99.65299999999999 2.5205e-05 7228600.0 5032.8 6507.2 5844.9 5352.5 8518.0 6136.5 6359.9 5685.7 9472.0 9607.8 8873.6 False True 5882.2135998535705 6838.38868550158 6673.794709102619 6663.862740282854 7265.013483726367 6785.8603569209745 7515.411506120962 6491.665386725979 7326.60712367585 7437.3913070931 6670.040221098853 0.8818857765275225 1.0252394976375407 1.0005628883603863 0.9990738465419656 1.0892008508052886 1.0173642334952877 1.1267415573219495 0.9732573075333738 1.0984352238986694 1.1150444465937313 1.0 12.703479745712862 -4.174888960290259 0.9199814832121799 1.0460517071509332 2.0914789248243494e-14 0.47221509286806274 0.0503523609681926 8.501039596460028 1.1776864372411626 0.0072593805580897395 14.230465406361143 6.685148205061575e-05 4.174888960290259 -1.0460517071509123 GFGFGQGAGALVHSE ddPTM_A549_PD325901_60min_R1 4 GFGFGQGAGALVHSE 15 0 E9PP21;P21291 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 0 ;;; 143.4 4.4536000000000003e-13 17330800.0 15015.7 13937.7 15390.3 16537.3 18616.600000000002 17422.4 17241.5 18761.9 19368.1 18307.699999999997 18540.699999999997 False True 16540.082810025902 15112.2788933624 16434.778307392124 17558.77146206669 17309.03423978342 17280.51775077831 17897.634717410816 18387.679186074176 18554.126111382044 17151.748697588373 16260.311439180905 1.017205781813678 0.9293966447006543 1.0107296141813633 1.0798545604579879 1.0644958618735623 1.0627421138526971 1.1006944599034316 1.1308319188627076 1.1410683110702269 1.0548228895702119 1.0 13.989067269647439 -6.107590602291238 3.637285857368604 1.0752165613603053 0.9722989387063177 0.5160988275387307 0.04098685196840448 0.19696361842404095 4.719912714717899 0.007917968789115498 0.02333398366426949 7.805655819609323e-07 6.107590602291238 -0.10291762265398763 GFGFIK ddPTM_A549_PD325901_60min_R1 1 GFGFIK 6 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 118.11 0.051009 3884400.0 1733.7 1596.7 1646.8 1460.4 1447.7 1655.2 1670.3 1930.5 1769.4 1636.6 2026.1 False True 1909.7039477175153 1731.2595126191384 1758.561751012868 1550.6055911909552 1346.0185462938703 1641.7205999798107 1733.8641805232312 1891.9946630520467 1695.0382712542475 1533.2647966960963 1776.9025445061102 1.0747375840177646 0.9743131484458207 0.9896782220555939 0.8726452646405242 0.7575083678367943 0.9239227019263044 0.9757789958059622 1.0647712047584053 0.9539286645151286 0.8628862631981131 1.0 10.795148842554685 -7.8007179748838 5.89177920279315 0.9856033384994329 0.9259877504514606 0.035684137819590456 0.0865165076841504 0.3410792096877083 30.05758194080263 0.012933466865664938 0.018157555557418777 1.5822752144004408e-08 7.8007179748838 -0.05961558804797229 GFGFVDFNS(ph)EEDAK ddPTM_A549_MK2206_60min_R1 2 GFGFVDFNSEEDAK 14 0 P19338;H7BY16 P19338 NCL Nucleolin 1 GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK 166.38 5.5573e-20 6613200.0 3419.3 3182.3 3086.6000000000004 2900.0 4195.6 4100.2 3826.8 3592.0 4797.3 5258.4 5118.4 True False 3996.394246141177 3344.265477297713 3524.3262928563577 3610.5001301859456 3578.4327978777123 4534.080442507515 4522.080025098461 4101.177000038642 3710.7192097139123 4070.5237878825924 3847.3600193464185 1.038736750926698 0.8692364271815222 0.9160375621554291 0.93843573568124 0.9301008431453236 1.1784913342416432 1.1753722038902568 1.0659717259148889 0.9644845273264241 1.0580043893511386 1.0 11.909653121789058 GFGFVDFNS(ph)EEDAK ddPTM_A549_PD325901_60min_R1 2 GFGFVDFNSEEDAK 14 0 P19338;H7BY16 P19338 NCL Nucleolin 1 GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK 203.11 1.3004e-31 8532700.0 11225.7 10065.7 11896.7 11054.2 14032.8 11895.8 11067.1 12924.4 13261.3 11933.3 13635.7 True False 12365.324800076432 10913.971864577228 12704.081602668692 11736.992828090302 13047.184538531892 11798.924548839917 11488.2645466495 12666.612703004344 12703.973678412984 11179.829401450275 11958.595343824089 1.0340114741370854 0.9126466404111293 1.0623389484643448 0.9814691851875202 1.0910298545447477 0.9866480309439828 0.9606700633601181 1.0592057293372592 1.0623299236372137 0.9348781424587629 1.0 13.545760320129762 -5.77929585597622 24.9994155995088 1.0270841126097223 0.9733289873429952 0.04901449576096606 0.05421578655580945 269.863052546298 377814.6544495724 0.006212928658996154 0.019376214743444923 1.6622798637376923e-06 5.77929585597622 -0.0537551252667271 GFGFVSFER ddPTM_A549_MK2206_60min_R1 1 GFGFVSFER 9 0 P11940-2;E7EQV3;A0A087WTT1;P11940;E7ERJ7;H0YAR2;H0YAP2;Q9H361 P11940-2 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 60.788000000000004 0.021958000000000002 1232200.0 569.51 903.38 925.95 988.71 1045.8 733.63 723.69 978.4 1422.9 1235.2 1094.5 False True 665.6293648173197 949.3581833520437 1057.2636334058006 1230.9439943848784 891.9642053628834 811.2622396558191 855.1751054049092 1117.091196224334 1100.6154219043885 956.167462116343 822.7054433367172 0.8090737337505262 1.1539466415849275 1.2851059172743111 1.4962147198059528 1.084184154349663 0.9860907645943281 1.0394669347713346 1.35782643140618 1.3378000970074149 1.1622233326162672 1.0 9.684232178741691 -5.266412554683778 4.961925416851191 1.180957979542453 0.791568276716324 0.3309551470331721 0.15569262290100175 0.17499164488982552 13.121176068479318 0.024681609268009413 0.23196210011426588 5.414862653189692e-06 5.266412554683778 -0.38938970282612895 GFGFVSFER ddPTM_A549_PD325901_60min_R1 2 GFGFVSFER 9 0 P11940-2;E7EQV3;A0A087WTT1;P11940;E7ERJ7;H0YAR2;H0YAP2;Q9H361 P11940-2 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ; 109.01 0.0011649000000000002 5687300.0 3003.3 3818.7 3285.8 3012.2 4120.6 3786.8 3932.8 3850.0 3711.8 4319.0 4267.1 False True 3308.1928050873944 4140.515250728815 3508.794147120524 3198.2567527974497 3831.183271298284 3755.9615563095404 4082.4648561107383 3773.2087297334265 3555.805954132202 4046.2976029148467 3742.2737513755633 0.8840060949232771 1.1064169875885932 0.9376102284956523 0.8546292883095078 1.0237581550227426 1.0036576172250748 1.090904922337691 1.0082663590140866 0.9501725930191983 1.0812404093707821 1.0 11.86969938180478 GFGFVTFDDHDPVDK ddPTM_A549_MK2206_60min_R1 2 GFGFVTFDDHDPVDK 15 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 140.08 1.3600999999999998e-10 16846600.0 4328.1 4265.299999999999 4045.6 3184.7 5560.6 5015.7 4628.3 5042.5 7117.1 5564.8 5362.1 False True 5058.577468114416 4482.385551430704 4619.326913231286 3964.951642966617 4742.64310608228 5546.458044847802 5469.20220031442 5757.289817008594 5505.088213673294 4307.707815078552 4030.5425835685783 1.2550611644042307 1.1121047497932826 1.1460806622073716 0.983726523354608 1.1766760945329646 1.3761070451058368 1.3569394410099684 1.4284155787063242 1.3658429602297308 1.0687662332709003 1.0 11.97675834920515 -6.998129058347076 24.99998889064121 1.228153954437452 1.1193442073123514 0.16005919765702814 0.13901470427618914 139.30960560890608 1861427.4149320922 0.02590598564182652 0.04871887387625542 1.0043172951417006e-07 6.998129058347076 -0.10880974712510061 GFGFVTFDDHDPVDK ddPTM_A549_PD325901_60min_R1 2 GFGFVTFDDHDPVDK 15 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 135.37 1.4782000000000001e-09 30595000.0 6573.4 6787.8 6956.5 7229.3 8956.7 7126.5 7469.6 7605.6 8798.9 7985.7 9036.4 False True 7240.726728918681 7359.831727786174 7428.6099228327785 7675.837442068457 8327.612290937563 7068.464146783546 7753.859715521958 7453.900341522222 8429.112831998982 7481.48153915191 7924.980086459213 0.9136586653751141 0.9286877250784941 0.9373663834847303 0.9685623633532597 1.0508054531476105 0.891922007332343 0.9784074699153332 0.940557611527392 1.0636131245807343 0.9440378975759101 1.0 12.952191594778153 -8.751607389249452 24.998501669887712 1.0300395316571964 0.9528551414398997 0.11673109159544881 0.04875183430056141 149.44118409899826 379964.0706153522 0.0074056920539724985 0.00834661779300999 1.7717098951490004e-09 8.751607389249452 -0.07718439021729673 GFGGAGELGQTPQVQAALS(ph)VSQENPEMEGPER ddPTM_A549_PD325901_60min_R1 1 GFGGAGELGQTPQVQAALSVSQENPEMEGPER 32 0 Q8NBJ4-2;Q8NBJ4 Q8NBJ4-2 GOLM1 Golgi membrane protein 1 1 GFGGAGELGQT(0.002)PQVQAALS(0.499)VS(0.499)QENPEMEGPER 52.669 0.0015748 4346700.0 584.48 641.87 600.54 677.14 781.07 469.4 692.5 595.28 648.06 667.7 658.14 True False 643.8159793285655 695.9626375429611 641.2962557403857 718.9653999034809 726.2103377452186 465.57736202907387 718.8534664505402 583.406673411874 620.8242918893565 625.5413080496055 577.1929522931999 1.115425919132711 1.20577119796402 1.111060440347551 1.2456240102153293 1.2581760308402405 0.806623435333583 1.2454300829463008 1.010765414050859 1.075592294436043 1.083764632891508 1.0 9.172909873952891 GFGGAGELGQTPQVQAALSVS(ph)QENPEMEGPER ddPTM_A549_PD325901_60min_R1 2 GFGGAGELGQTPQVQAALSVSQENPEMEGPER 32 0 Q8NBJ4-2;Q8NBJ4 Q8NBJ4-2 GOLM1 Golgi membrane protein 1 1 GFGGAGELGQTPQVQAALS(0.453)VS(0.547)QENPEMEGPER;GFGGAGELGQT(0.002)PQVQAALS(0.406)VS(0.592)QENPEMEGPER 68.219 0.00014347 5224800.0 1760.3400000000001 2118.7 1673.27 1897.69 2220.73 2423.2 1976.79 1933.97 2341.2 1442.61 2332.29 True False 1939.0484209061856 2297.250284578298 1786.828164389909 2014.9060013333087 2064.7535859025943 2403.4662626094005 2052.0178251909947 1895.395451179885 2242.8075057423084 1351.523358402637 2045.4331156044404 0.9479891599062052 1.1231119057635104 0.8735695881514504 0.9850754766615233 1.0094456622173364 1.1750402612891884 1.0032192250806542 0.9266474844472153 1.0964951572515937 0.6607516755703117 1.0 10.998190647425366 -7.00679041690422 24.282270362385002 1.0433197237082217 0.9862775414073994 0.0 0.14030080321072258 414.0383589695359 1480600.145452115 0.011634963206497519 0.02139408050404905 9.844860873058477e-08 7.00679041690422 -0.05704218230082225 GFGLVAYAADS(ph)SDEEEEHGGHK ddPTM_A549_MK2206_60min_R1 2 GFGLVAYAADSSDEEEEHGGHK 22 0 Q7Z7F0 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 1 GFGLVAYAADS(0.902)S(0.098)DEEEEHGGHK;GFGLVAYAADS(0.888)S(0.112)DEEEEHGGHK 159.73 1.1958999999999999e-32 13177600.0 1563.24 1759.87 2164.08 1378.71 2441.52 1696.02 1531.76 1927.4499999999998 2653.5 2212.19 2609.3900000000003 True False 1827.0766944514182 1849.4398659874703 2470.9790850270815 1716.494011892644 2082.375642261987 1875.4917106730402 1810.0609645774082 2200.671940068062 2052.486486768778 1712.4547425673193 1961.406447499677 0.9315135558876657 0.9429151557776629 1.259799613780707 0.8751342762642401 1.0616747206661408 0.9561973822732369 0.9228382862128357 1.1219866962675642 1.0464360864038182 0.8730749023234264 1.0 10.93767281000981 -8.241009125329457 24.777159032631435 1.0300452540168028 0.9979207886738055 0.0 0.11151831406899097 2828.404113943242 3430201.804744546 0.01542328659677641 0.019903162519177127 5.741043990864672e-09 8.241009125329457 -0.03212446534299729 GFGLVAYAADS(ph)SDEEEEHGGHK ddPTM_A549_PD325901_60min_R1 2 GFGLVAYAADSSDEEEEHGGHK 22 0 Q7Z7F0 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 1 GFGLVAYAADS(0.911)S(0.089)DEEEEHGGHK;GFGLVAYAADS(0.892)S(0.108)DEEEEHGGHK 187.62 1.7994e-49 13881200.0 2409.2400000000002 2583.2 2285.0 2393.7 3049.5 3234.1 2663.3999999999996 2860.7 2589.5 3264.1000000000004 2994.7 True False 2653.8242712112537 2800.8953297411886 2440.073840821231 2541.553412512868 2835.313640203879 3207.762561862436 2764.7571444684013 2803.641094324265 2480.67232022882 3058.004168945208 2626.3708849674017 1.0104529738739443 1.0664507993797505 0.9290667417871247 0.9677054474902974 1.0795556927745453 1.2213669364912452 1.0526910575703847 1.0674962589524226 0.9445247563577106 1.1643458989163915 1.0 11.35885494655968 -8.756005071507236 24.987172468075478 0.9738033563015479 1.0500398171512615 0.0 0.09127170512249703 175.17798222586765 805475.991857608 0.013072722030030386 0.014613342202666146 1.7538600208868065e-09 8.756005071507236 0.07623646084971358 GFGLVAYAADSS(ph)DEEEEHGGHK ddPTM_A549_MK2206_60min_R1 2 GFGLVAYAADSSDEEEEHGGHK 22 0 Q7Z7F0 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 1 GFGLVAYAADS(0.138)S(0.862)DEEEEHGGHK;GFGLVAYAADS(0.146)S(0.854)DEEEEHGGHK 178.53 1.1479e-40 18488700.0 2333.3 2457.8 2232.8 2143.8 4244.9 2307.8 2143.7 2480.47 3413.9 3223.9 2978.3 True False 2727.103996291991 2582.891521887413 2549.4446143619775 2669.0310962388385 3620.4808331850286 2552.0098642063426 2533.182541497746 2832.084218620784 2640.657100878062 2495.6187509042097 2238.7059131016413 1.2181608939039665 1.1537431097007806 1.1388028232925957 1.1922205058818995 1.6172203825418905 1.1399486861008157 1.1315387727672184 1.2650541556380848 1.179546221513094 1.114759529735027 1.0 11.128449306119151 -10.112293941526476 0.567229380737595 0.991682676434737 1.2370945885868438 0.18281408358107953 0.13362149025300574 0.8764604023192558 0.5281728485207046 0.10197524885500339 0.031994414330118195 7.721577922070408e-11 10.112293941526476 0.2454119121521069 GFGLVAYAADSS(ph)DEEEEHGGHK ddPTM_A549_PD325901_60min_R1 2 GFGLVAYAADSSDEEEEHGGHK 22 0 Q7Z7F0 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 1 GFGLVAYAADS(0.109)S(0.891)DEEEEHGGHK;GFGLVAYAADS(0.143)S(0.857)DEEEEHGGHK 171.15 4.7533e-40 28464000.0 1655.54 1876.7 2301.9 1955.0700000000002 2403.7 1827.24 1836.26 2711.5 1996.46 2097.52 1815.13 True False 1823.6092020558674 2034.8560952792225 2458.1207764491865 2075.8302336138736 2234.872404314827 1812.3595632594904 1906.1398791400275 2657.4170053693992 1912.5557290766671 1965.0822292349974 1591.8805170570943 1.1455691444902971 1.2782718762341887 1.5441616064210073 1.3040113321139555 1.403919691439173 1.1385022580777577 1.197413913114474 1.6693570760462348 1.2014442720942426 1.2344407813143163 1.0 10.636516339188015 -9.59441292327098 1.190912119349624 1.0423054607898241 1.329133897721162 0.15377071798325437 0.16842804457807445 0.3136777322034312 0.9151873229923858 0.042349568492784144 0.030730078025737326 2.544409900190001e-10 9.59441292327098 0.28682843693133786 GFGS(ph)EEGSR ddPTM_A549_MK2206_60min_R1 4 GFGSEEGSR 9 0 Q9Y5S9 Q9Y5S9 RBM8A RNA-binding protein 8A 1 GFGS(1)EEGSR;GFGS(0.999)EEGS(0.001)R;GFGS(0.888)EEGS(0.112)R;GFGS(1)EEGSR 142.83 3.6861e-05 316584000.0 18884.5 19952.199999999997 18232.1 17429.4 23593.2 20347.9 17331.4 19486.300000000003 27482.800000000003 28477.199999999997 29362.0 True False 22071.74191830289 20967.681757263414 20817.685934033045 21699.603782435508 20122.67153372306 22501.101272157128 20480.291038724667 22248.542699290938 21257.98968101339 22044.180741725653 22070.6050500253 1.0000515105170436 0.9500275008201181 0.9432313199773008 0.9831902538807215 0.9117408194343993 1.0195054109824386 0.9279442494804278 1.0080622007807363 0.9631811014165659 0.9988027374763966 1.0 14.429838560173133 -12.686897600966505 0.2736624706536428 1.0593401294487075 0.9620633570812243 0.135427854435347 0.031860253064778764 18.262596223657194 0.7126920088705613 0.6481379206097075 0.01371187720514742 2.056375396135494e-13 12.686897600966505 -0.09727677236748322 GFGS(ph)EEGSR ddPTM_A549_PD325901_60min_R1 4 GFGSEEGSR 9 0 Q9Y5S9 Q9Y5S9 RBM8A RNA-binding protein 8A 1 GFGS(1)EEGSR;GFGS(1)EEGSR;GFGS(1)EEGSR;GFGS(1)EEGSR 159.34 9.695599999999999e-06 389828000.0 24556.7 23739.100000000002 25105.3 25970.1 29528.1 26157.399999999998 26085.5 27301.800000000003 27469.1 27857.600000000002 31000.899999999998 True False 27049.67810631293 25739.677269378706 26809.09662843292 27574.214094623556 27454.1481224149 25944.382806858313 27078.1979770333 26757.244181152233 26314.669253368393 26098.666381792253 27187.98583089656 0.9949129102301335 0.9467298324147283 0.9860640944562701 1.0142058432032903 1.0097897024507005 0.9542590969491749 0.9959618982242334 0.9841569120852333 0.9678785849396859 0.9599337937028642 1.0 14.730681655611981 -11.150165898924755 1.5471245956926503 0.9999532692836739 0.981615249038978 0.0 0.023266025703599338 0.7910939148952766 3.4090620206349302 0.014608582473805292 0.0031518076526206485 7.076754032950084e-12 11.150165898924755 -0.018338020244695885 GFGS(ph)FR ddPTM_A549_MK2206_60min_R1 1 GFGSFR 6 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 GFGS(1)FR 94.40700000000001 0.035873 14280000.0 2802.6 2024.9 2158.6 2058.9 3254.7 2315.5 1850.5 2615.6 2949.6 2768.1 3135.8 True False 3275.6103630085854 2127.9587609528135 2464.72193862494 2563.3305924275323 2775.937941475018 2560.524673095496 2186.711896740019 2986.369309939054 2281.5203095433176 2142.7842874710573 2357.094316322776 1.3896814990919648 0.9027889746357586 1.0456611437042833 1.087495979552697 1.1776948941973886 1.0863055650187492 0.9277150606987312 1.2669706465535027 0.9679376398915768 0.9090787214717582 1.0 11.20279377212958 GFGS(ph)FR ddPTM_A549_PD325901_60min_R1 2 GFGSFR 6 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 GFGS(1)FR;GFGS(1)FR 79.146 0.043615 46720000.0 4624.2 4710.1 5484.3 4728.0 5658.4 5037.5 4433.0 4196.6 4447.3 4885.9 5299.3 True False 5093.645379843883 5107.036657097386 5856.4975777750005 5020.0378219329195 5260.973504420277 4996.4762701778045 4601.700240830676 4112.895520830991 4260.39544690235 4577.403440167089 4647.519695030472 1.095992209627524 1.0988735911239427 1.2601339987945124 1.0801541792928335 1.131995956907028 1.0750844747404658 0.9901410952063765 0.8849657001408413 0.9167030430140902 0.984913188224171 1.0 12.182245263601914 -7.665099968969903 2.279362818556094 0.9533281070489087 1.1354885659588951 0.7232176732900064 0.05312371082621064 0.1279648214019609 1.357600355281292 0.009041511435471552 0.014033199383086777 2.162220751201332e-08 7.665099968969903 0.18216045890998644 GFGS(ph)VEELCTNSSLGMEK ddPTM_A549_PD325901_60min_R1 4 GFGSVEELCTNSSLGMEK 18 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 GFGS(0.979)VEELCT(0.013)NS(0.003)S(0.005)LGMEK;GFGS(0.998)VEELCT(0.001)NSSLGMEK;GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK 130.39 1.6476e-12 12832000.0 6976.900000000001 7400.099999999999 7706.9 6498.700000000001 7249.8 7215.1 7126.299999999999 7793.1 7025.2 7251.599999999999 7998.5 True False 7685.189751877679 8023.732397653209 8229.936579354553 6900.10993938145 6740.599058452232 7156.342617758785 7397.495246160984 7637.660506931323 6729.95527479108 6793.732738434203 7014.73520666903 1.0955780261771302 1.1438396691046737 1.173235530192246 0.9836593593470779 0.9609199577546175 1.020187135639151 1.0545651444017525 1.088802396941522 0.9594026112907007 0.9684945387496999 1.0 12.77617293045515 -6.2672757129740795 24.90864120997061 0.9949664913203317 1.1381799368212049 0.662000006750382 0.041938286746431505 196.48015775098287 838551.1311588667 0.006438769581768356 0.015334170600124014 5.404111326154775e-07 6.2672757129740795 0.14321344550087323 GFGSEEGS(ph)RAR ddPTM_A549_PD325901_60min_R1 2 GFGSEEGSRAR 11 1 Q9Y5S9 Q9Y5S9 RBM8A RNA-binding protein 8A 1 GFGSEEGS(1)RAR;GFGSEEGS(1)RAR 47.18899999999999 0.0091012 28242000.0 12828.8 13989.5 13919.3 11653.900000000001 14838.1 13081.9 13118.4 14502.3 13666.4 13524.099999999999 13587.3 True False 14131.1703319366 15168.44426115452 14863.94740155054 12373.734935072784 13795.923044666079 12975.365343690119 13617.627890663916 14213.040249665737 13092.04873418619 12670.18601796266 11916.148236991203 1.1858840668051882 1.2729318198700517 1.2473785241617343 1.0384005543553998 1.1577502033618134 1.0888892186999484 1.1427877213201179 1.1927545685898997 1.098681257887062 1.0632786506155323 1.0 13.540630355500442 -9.8616978295502 0.02499217825542843 4.641796555347385e-11 2.1404510292302406 0.45328122002868343 0.060769333180748425 161.2868451426573 1.4569813724686433 66.75957859038496 57.865030661551444 1.3749983292218714e-10 9.8616978295502 2.1404510291838226 GFIDQNLS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 GFIDQNLSPTK 11 0 F8WAY9;C9JTZ9;Q14188 F8WAY9 TFDP2 Transcription factor Dp-2 1 GFIDQNLS(0.572)PT(0.428)K 71.806 0.0023173 2608900.0 2109.2 2856.1 2898.4 3013.4 4005.9 2842.9 3056.4 2912.5 5171.3 3466.5 4171.3 True False 2465.1813950109595 3001.4632906105644 3309.4367029141667 3751.683135276665 3416.637416583642 3143.7337910357087 3611.708317317588 3325.3557941571694 4000.0088068691853 2683.415242411192 3135.4510879766553 0.7862286241568421 0.9572668194761874 1.0554898195046591 1.1965369670932011 1.0896797049985045 1.002641630446992 1.1518943258809586 1.0605669490137262 1.275736311820587 0.8558306818119853 1.0 11.614457298844624 -5.462555519902472 1.629441807777125 1.1211370759482227 0.736349140840108 0.33381085470615646 0.11111921321093948 0.4394998310253088 1.4761369627951753 0.01485632830307813 0.23450770081952135 3.4470253722531497e-06 5.462555519902472 -0.3847879351081146 GFKDQIYDIFQK ddPTM_A549_MK2206_60min_R1 2 GFKDQIYDIFQK 12 1 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;J3KTN0 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ; 128.9 8.442800000000001e-08 10316400.0 4795.799999999999 6155.8 5477.4 4685.2 7753.4 6383.2 5896.9 5394.6 8469.8 7257.4 7031.3 False True 5605.213793947259 6469.1039264523315 6254.177683046531 5833.074210326622 6612.88513086687 7058.665987174769 6968.29039929004 6159.3010702696165 6551.403823491313 5617.948299516795 5285.234155992197 1.060542187632743 1.2239957087081768 1.1833302931253826 1.1036548312080563 1.2512000293060683 1.3355446095367265 1.3184449720907176 1.1653790330720608 1.2395673739570425 1.0629516372793775 1.0 12.367751674568128 -10.70914943398456 0.8683056556520354 0.9941519678781923 1.2137263829038343 0.4160238127614714 0.07989099265424471 0.43827661511614274 0.5621069843675179 0.06323642692348551 0.014817313860943478 1.953667113606747e-11 10.70914943398456 0.219574415025642 GFKDQIYDIFQK ddPTM_A549_PD325901_60min_R1 2 GFKDQIYDIFQK 12 1 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;J3KTN0 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ; 119.01 1.8499e-05 15207400.0 6579.1 7110.5 7176.3 8288.5 8539.8 8187.799999999999 8188.1 10180.900000000001 7659.6 15632.900000000001 8034.7 False True 7247.005388722562 7709.726789301916 7663.326872597551 8800.461820450728 7939.993908710642 8121.121271456435 8499.70262620024 9977.833962738463 7337.6936489765085 14645.83602607259 7046.4828361597365 1.0284571121828077 1.0941241139109397 1.0875392803445738 1.248915526380093 1.1268024194944126 1.1525070677504645 1.2062333541186192 1.4160020246606155 1.0413271158942436 2.0784604697986357 1.0 12.782687618630233 -8.970099896859516 24.999888100595218 1.0182323677489016 1.1704748086125076 0.0 0.33401662384256053 154.27104177006225 128989.163824615 0.017145131630563918 0.018043446905774273 1.0712728616192324e-09 8.970099896859516 0.15224244086360605 GFLS(ph)PGSR ddPTM_A549_MK2206_60min_R1 2 GFLSPGSR 8 0 Q5UIP0;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 GFLS(0.907)PGS(0.093)R;GFLS(1)PGSR 108.57 0.0017399999999999998 26579000.0 1260.65 1088.38 1661.33 1178.9 1892.85 1316.96 1214.58 1401.92 2052.0 1775.55 2003.75 True False 1473.4169000666434 1143.7738931531553 1896.9315752319892 1467.7305529228322 1614.4142724432322 1456.3198330727037 1435.253464221828 1600.646453199938 1587.225276370655 1374.4520218269702 1506.1635743133372 0.9782582218789728 0.7593955348937474 1.2594459244553193 0.9744828370264985 1.0718718072698357 0.966906820686221 0.952920047131111 1.0627308218695142 1.0538199857172046 0.9125516280352122 1.0 10.556662744602656 -5.72892504351717 24.999999003120777 1.0310459383328208 0.868827049315349 0.27833568180201396 0.09896198206367234 154.65875668486416 118913.74472610884 0.011155426956045338 0.04319852675826833 1.8667018439737646e-06 5.72892504351717 -0.16221888901747172 GFLS(ph)PGSR ddPTM_A549_PD325901_60min_R1 2 GFLSPGSR 8 0 Q5UIP0;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 GFLS(1)PGSR;GFLS(1)PGSR 106.42 0.0019073 39885000.0 2789.3 3039.7 2415.24 2556.08 3036.2 2260.33 2495.63 2789.66 3259.7 2830.2 3224.8 True False 3072.467682625869 3295.8661868280774 2579.152710417974 2713.9632563211303 2822.947786321372 2241.922621890022 2590.602565311136 2734.0180428540666 3122.7061449121015 2651.5006889950446 2828.1700436914807 1.0863801098096344 1.1653705880167426 0.9119510745724201 0.9596181327126705 0.9981534853670636 0.7927113954448592 0.915999577567741 0.9667092150108054 1.104143703055484 0.9375322728240776 1.0 11.465653149439992 -14.225722636852124 13.282482349468824 0.7550704433916976 1.0143498362245158 0.0 0.1031216449761921 0.0 0.0 0.0 0.01436423992372756 5.946718258643853e-15 14.225722636852124 0.2592793928328182 GFLS(ph)PGSRS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GFLSPGSRSPK 11 1 Q5UIP0;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 2 GFLS(0.919)PGS(0.326)RS(0.754)PK 43.184 0.02035 3915100.0 687.56 654.74 479.73 769.83 903.46 487.32 536.9 640.9 889.66 775.29 834.86 True False 803.60331877192 688.0634693793498 547.762927645947 958.4383845589824 770.5622308062248 538.8878789431645 634.4477802538322 731.7495376739328 688.1534304950867 600.1514505377102 627.5412210361735 1.280558618037934 1.0964434626991422 0.8728716286421799 1.5272915187570362 1.22790695650861 0.8587290537717542 1.0110057458954727 1.1660581219918815 1.0965868176098974 0.9563538305049694 1.0 9.293566417652883 -7.178854144596872 24.999996646746272 1.0421406426828896 1.1951016149307545 0.23399199220667832 0.1635846979785736 129.88957717378202 39318.3908853768 0.023535463916845197 0.040764617563313885 6.624389428074744e-08 7.178854144596872 0.15296097224786487 GFLS(ph)PGSRS(ph)PK ddPTM_A549_PD325901_60min_R1 1 GFLSPGSRSPK 11 1 Q5UIP0;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 2 GFLS(0.994)PGS(0.037)RS(0.969)PK 86.46700000000001 9.8332e-05 8074100.0 1088.7 1029.8 1063.7 1174.8 1190.8 1108.3 1004.2 1214.3 1347.4 1753.2 1383.0 True False 1199.2240225414193 1116.584860083414 1135.8890785477215 1247.3647278356173 1107.162316036984 1099.2743722556934 1042.4153805193255 1190.0798339000783 1290.7734637097171 1642.502652797016 1212.899767559327 0.9887247525445347 0.9205912062546405 0.9365069636656199 1.028415340820489 0.9128225972578802 0.9063192208105721 0.8594406631117912 0.9811856393499288 1.064204560206234 1.3541948780336257 1.0 10.24424461762677 -8.525200228492565 13.750674689395664 1.0299211233549588 0.9358474693349281 0.28830261298786586 0.10705231002735217 0.1883771084508615 1080.4386746574392 0.007895300459796376 0.009051939757872865 2.984006545973616e-09 8.525200228492565 -0.09407365402003065 GFNGCDS(ph)PEPDGEDSLEQSPLLEDK ddPTM_A549_PD325901_60min_R1 1 GFNGCDSPEPDGEDSLEQSPLLEDK 25 0 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 GFNGCDS(0.892)PEPDGEDS(0.092)LEQS(0.016)PLLEDK 41.89 0.022425999999999998 2213700.0 885.4 662.8 769.55 828.03 925.26 607.33 853.21 937.89 644.1 761.58 1092.6 True False 975.2851562029697 718.6564820968018 821.776290680078 879.1755325074278 860.2729295737149 602.3841058396198 885.6793734444265 919.183048189529 617.0307169180857 713.4937088279445 958.2171265620535 1.0178122777894336 0.7499933597255132 0.8576096877212935 0.9175118124446223 0.8977849651469407 0.6286509488730264 0.9242992521143072 0.9592638481503944 0.6439362226094872 0.7446054647216108 1.0 9.904208789286907 -5.241470408740504 22.911982366804995 0.8372080367244081 1.0178128172062764 0.16542092237597017 0.11929715104131962 2441.4837405372377 2801168.2283001225 0.019305320107539187 0.8999630380369262 5.734949410914387e-06 5.241470408740504 0.18060478048186823 GFNGCDS(ph)PEPDGEDSLEQSPLLEDKYR ddPTM_A549_MK2206_60min_R1 2 GFNGCDSPEPDGEDSLEQSPLLEDKYR 27 1 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 GFNGCDS(1)PEPDGEDSLEQSPLLEDKYR;GFNGCDS(0.995)PEPDGEDS(0.005)LEQSPLLEDKYR 87.749 2.9454e-09 6847300.0 1453.38 1803.7600000000002 1287.19 1560.0900000000001 2229.4 1851.01 1155.19 1762.3600000000001 2755.5 2471.3999999999996 2734.1000000000004 True False 1698.6750122705423 1895.5636795181229 1469.7328973309716 1942.3121200351006 1901.458213268323 2046.8826495990031 1365.0730699784397 2012.1799270011438 2131.3836496293097 1913.1090235381557 2055.147512678775 0.8265465139562708 0.9223492074529273 0.7151471552595527 0.945096207475346 0.9252173878214094 0.9959784574933023 0.6642214544488536 0.9790926999582501 1.0370952140808447 0.930886474929734 1.0 11.005026234857267 -8.503019666224677 24.686234851220917 1.017021237019213 0.861813271440171 0.28493434856603506 0.09654491671218875 485.36106032764206 603338.9183967252 0.01442014753868531 0.01730975254999871 3.140366484951671e-09 8.503019666224677 -0.15520796557904215 GFNGCDS(ph)PEPDGEDSLEQSPLLEDKYR ddPTM_A549_PD325901_60min_R1 1 GFNGCDSPEPDGEDSLEQSPLLEDKYR 27 1 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 GFNGCDS(0.975)PEPDGEDS(0.025)LEQSPLLEDKYR 91.87299999999999 1.9724e-09 5710300.0 1068.7 992.65 1293.9 1246.0 1138.5 1184.1 1237.9 913.01 1267.7 1295.2 1282.6 True False 1177.1936372646417 1076.3040992054773 1381.7118348527745 1322.962590128685 1058.5356876117785 1174.4570821871032 1285.008961904872 894.7992993075114 1214.422977545501 1213.420850959785 1124.8483310712888 1.0465354348203548 0.9568437534866778 1.2283539004203816 1.176125308261528 0.9410474802444209 1.044102613432842 1.1423842009713865 0.7954843996215186 1.079632643797322 1.0787417445018042 1.0 10.135514773426706 -6.758652313176607 24.996827185002992 1.0227772117767084 1.100626614323846 0.1367435657171101 0.10685565987851346 132.49342707549243 1188293.684097285 0.014894214017192747 0.029946797894416347 1.7432018848532194e-07 6.758652313176607 0.07784940254713746 GFPALSQKNS(ph)PFKR ddPTM_A549_MK2206_60min_R1 1 GFPALSQKNSPFKR 14 2 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 GFPALS(0.091)QKNS(0.909)PFKR 44.294 0.012227 3550100.0 1112.5 1841.6 1819.8 1528.3 1802.5 1344.9 1072.8 930.19 1636.8 2461.3 2383.0 True False 1300.2628019863885 1935.329573890415 2077.8750041275202 1902.7335686079948 1537.3546377573107 1487.2164253276317 1267.7138734518733 1062.047281087402 1266.067413432499 1905.2906205529105 1791.2353325458166 0.7259028327329682 1.0804440593184383 1.1600234577632595 1.062246559140674 0.8582650251613367 0.8302741679474945 0.7077316142765665 0.5929133161849557 0.7068124385605348 1.0636740945953713 1.0 10.806739175751016 -6.850686767844173 5.063472862638 0.8221589584683316 1.0228819306988066 0.23504769888284827 0.15989728292081085 0.24174228154762217 10.440267253263109 0.02481020110877472 0.047960112723798215 1.4103056057177112e-07 6.850686767844173 0.20072297223047497 GFQS(ph)PDKSNNSTGTAITLNSK ddPTM_A549_MK2206_60min_R1 1 GFQSPDKSNNSTGTAITLNSK 21 1 D6RCC7;Q9P2D6-3;Q9P2D6-2;Q9P2D6-4;Q9P2D6 D6RCC7 FAM135A Protein FAM135A 1 GFQS(1)PDKSNNSTGTAITLNSK 137.89 1.345e-18 5204000.0 2960.2 3997.7 3889.4 3998.2 4944.3 3909.0 3231.3 3045.0 6120.7 5951.9 5032.5 True False 3459.8093900585245 4201.165854442718 4440.975404469486 4977.759179486019 4217.000019674607 4322.647785415803 3818.3853833753165 3476.6380749213995 4734.371222749451 4607.361656225926 3782.7913600658117 0.9146180850953228 1.1105994104759793 1.1739942761189515 1.3158957779261233 1.114785252021206 1.1427137724404126 1.0094094598198737 0.9190668329275539 1.2515549423976382 1.217979322059615 1.0 11.885235491369448 GFQS(ph)PDKSNNSTGTAITLNSK ddPTM_A549_PD325901_60min_R1 2 GFQSPDKSNNSTGTAITLNSK 21 1 D6RCC7;Q9P2D6-3;Q9P2D6-2;Q9P2D6-4;Q9P2D6 D6RCC7 FAM135A Protein FAM135A 1 GFQS(1)PDKSNNSTGTAITLNSK;GFQS(0.98)PDKS(0.02)NNSTGTAITLNSK 171.79 1.1918e-35 16261600.0 7300.6 7207.5 8519.6 7378.5 9012.6 8790.9 8389.9 8603.3 8844.6 7953.0 8730.0 True False 8041.751537582338 7814.901319723453 9097.791288516653 7834.253187210674 8379.586067782095 8719.30982501361 8709.182235629438 8431.700432341717 8472.892219925016 7450.84622273253 7656.265344029589 1.0503491162115162 1.0207197593821078 1.188280562351614 1.023247345172001 1.0944743541727635 1.1388463478232231 1.137523563289368 1.1012811146777741 1.1066612557429503 0.9731698011933133 1.0 12.902425114993077 -10.66581251047308 0.8941091260056335 0.9989890699362185 1.0968376400955506 0.4141041823810143 0.04901678095195463 0.5236462574612024 0.7332693704005631 0.03352214837236925 0.008554423635200316 2.1586761313668372e-11 10.66581251047308 0.09784857015933213 GFQVAPEHHNDHK ddPTM_A549_PD325901_60min_R1 2 GFQVAPEHHNDHK 13 0 P21399 P21399 ACO1 Cytoplasmic aconitate hydratase 0 ; 91.85799999999999 6.7437e-05 4692500.0 629.13 586.56 481.45 690.26 645.5899999999999 567.75 643.28 699.06 736.22 516.9200000000001 711.56 False True 692.9988144589729 635.991469732499 514.1240921940404 732.8957925057996 600.2459855645916 563.1264322369128 667.7603724163229 685.1166998980393 705.2792336740147 484.28158298188123 624.0426309504805 1.1104991551674364 1.0191474719664892 0.8238605292253462 1.1744322521516273 0.9618669555481423 0.9023845556500104 1.0700556969950206 1.0978684242365568 1.1301779697322962 0.7760392623245482 1.0 9.285500778734075 -7.893160799595883 19.049076355235293 1.0669542342617246 0.9970010286737776 0.0 0.12760014009729237 3.655425684584748 635.0922310458294 0.014893242577255926 0.020578061135786006 1.2789076948329406e-08 7.893160799595883 -0.06995320558794704 GFS(ph)DSGGGPPAK ddPTM_A549_MK2206_60min_R1 2 GFSDSGGGPPAK 12 0 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 GFS(0.989)DS(0.011)GGGPPAK;GFS(0.996)DS(0.004)GGGPPAK 84.605 0.00046653 4609000.0 5726.4 6898.7 5454.5 5776.6 8070.4 6853.2 5240.9 5781.1 9731.4 8136.1 10010.0 True False 6692.876322961669 7249.8143632698775 6228.030118701811 7191.867259321427 6883.254850794236 7578.401075214017 6193.103690691576 6600.588628876226 7527.253437852531 6298.149359233146 7524.2407380544 0.8895085306231572 0.9635276987621367 0.8277287151649856 0.9558263098824085 0.9148105556992174 1.0071981132774894 0.8230868610263224 0.8772431476698059 1.0004003991768755 0.8370478269494745 1.0 12.877330293284102 -8.774043764746686 24.8248933217774 1.000189090273067 0.9089656032427202 0.0 0.07187829073639454 147.01102106819124 289543.7039800699 0.008607551150208762 0.009193937837591934 1.682504503093764e-09 8.774043764746686 -0.09122348703034677 GFS(ph)DSGGGPPAK ddPTM_A549_PD325901_60min_R1 2 GFSDSGGGPPAK 12 0 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 GFS(0.854)DS(0.146)GGGPPAK;GFS(0.791)DS(0.209)GGGPPAK 124.38 3.7333e-17 11606000.0 7764.6 9487.4 9224.9 9383.9 9827.7 9253.6 9792.1 9062.0 8723.7 9742.2 10110.0 True False 8552.856476003586 10286.936494033196 9850.957187830098 9963.522190616819 9137.436255724442 9178.2417496213 10164.74372394272 8881.251300998529 8357.073226483935 9127.075829385753 8866.534092570346 0.9646222962330225 1.1601981548408038 1.1110268211887486 1.1237223120774653 1.0305533323760743 1.0351555245597204 1.146416809298709 1.0016598603551883 0.9425411484614592 1.02938484576896 1.0 13.114154553266651 -8.45139007253338 6.517610621853733 0.9727912067085444 1.0834530748109215 0.34234735892304435 0.057496492973607344 0.15665088804268126 11.766515170898378 0.008880303642984403 0.010712657363227636 3.5367953219600957e-09 8.45139007253338 0.1106618681023771 GFS(ph)FVATGLMEDDGKPR ddPTM_A549_MK2206_60min_R1 2 GFSFVATGLMEDDGKPR 17 1 E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q5SVM6 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 GFS(0.999)FVAT(0.001)GLMEDDGKPR;GFS(0.981)FVAT(0.019)GLMEDDGKPR 54.511 0.002858 6540000.0 1652.75 1788.1999999999998 2072.91 2171.3999999999996 2138.7 1702.22 1797.8899999999999 1557.04 2718.5 2353.88 2335.5 True False 1931.693794142026 1879.2117419802557 2366.8798081140644 2703.393097477849 1824.1000631187585 1882.3477905578134 2124.5433407348905 1777.7551882350142 2102.76409055245 1822.136873159341 1755.5308934791262 1.1003473657554261 1.0704521059472885 1.3482416156307917 1.5399290935406107 1.039058936470062 1.0722384878270985 1.210199916518958 1.0126595862473509 1.1977938402355164 1.0379406479986315 1.0 10.777691669360939 GFS(ph)FVATGLMEDDGKPR ddPTM_A549_PD325901_60min_R1 2 GFSFVATGLMEDDGKPR 17 1 E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q5SVM6 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 GFS(0.838)FVAT(0.162)GLMEDDGKPR;GFS(0.933)FVAT(0.067)GLMEDDGKPR 65.808 0.00053625 7612700.0 2081.42 1861.18 1494.55 2150.8999999999996 2127.28 2424.7 2313.8 3018.7 4680.6 6219.7 6515.5 True False 2292.7242261395827 2018.0281704117779 1595.9791504592442 2283.756207951676 1977.867191517597 2404.954047106722 2401.852925159941 2958.4896603756624 4483.890659224952 5826.987080539358 5714.134805157477 0.4012373358903277 0.3531642565713258 0.2793037274897228 0.3996678912598278 0.34613589965228136 0.42087807325372395 0.4203353625805382 0.5177493638591414 0.7847015886250832 1.0197496697627826 1.0 12.480319356714826 -8.81460675820227 0.8095916418509603 0.9536614567378965 0.3461998627102362 0.9597560433587263 0.0509678933566947 0.06951137802458802 0.09403687392623084 0.013534442530268517 0.013524886066391177 1.5324744474261315e-09 8.81460675820227 -0.6074615940276603 down GFS(ph)LEELR ddPTM_A549_PD325901_60min_R1 2 GFSLEELR 8 0 P26373;P26373-2;J3QSB4 P26373 RPL13 60S ribosomal protein L13 1 GFS(1)LEELR;GFS(1)LEELR 76.827 0.004580699999999999 4680500.0 906.96 804.96 754.75 676.02 751.35 843.08 776.49 956.9300000000001 733.74 985.9 776.05 True False 999.0339115313369 872.7968042073655 805.9718736804483 717.7762200471852 698.5777680167848 836.2142360022832 806.0397518616313 937.8432804529381 702.9034594495822 923.6501057452538 680.6007697862728 1.4678706752639448 1.2823917382306922 1.1842065267330588 1.0546215225007554 1.026413426238347 1.228641331488469 1.18430625947536 1.37796388438915 1.0327691220071835 1.3571099927425956 1.0 9.410664972823474 -2.0000000000000004 0.15397315013415952 0.9661984304845515 2.3918574902054965 0.0 0.1604999144974996 46.07436185291095 0.43892573648519534 0.21446736130061608 14.894078643058318 0.00999999999999999 2.0000000000000004 1.425659059720945 GFS(ph)PQHK ddPTM_A549_PD325901_60min_R1 1 GFSPQHK 7 0 E7ETC2;Q08209-4;Q08209-5;Q08209-3;Q08209-2;Q08209 E7ETC2 PPP3CA Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform 1 GFS(1)PQHK 57.858999999999995 0.010498 5733100.0 1376.0 1334.8 1346.5 1562.5 1799.1 1555.5 1610.2 1894.6 1231.0 1653.6 2063.3 True False 1515.6905070423384 1447.2882804810076 1437.8815871622712 1659.0120763050325 1672.7374225580597 1542.8325237243814 1671.4770421352496 1856.8107167150536 1179.265350917813 1549.191413794859 1809.5271803363412 0.8376168777750072 0.799815717723564 0.7946172916258758 0.916820755351499 0.9244058009933535 0.8526163853684758 0.9237092762677199 1.0261303266911546 0.6516980588811162 0.8561305022823184 1.0 10.821397062801909 -6.230627613555649 24.05480611125032 0.8640799116692164 0.8095965357047612 0.07320749684372607 0.09587725196166982 1521.9215526928886 1188163.0490432715 0.018634378340308542 0.04929433206381522 5.879933121715924e-07 6.230627613555649 -0.05448337596445518 GFSLEELR ddPTM_A549_MK2206_60min_R1 2 GFSLEELR 8 0 P26373;P26373-2;J3QSB4 P26373 RPL13 60S ribosomal protein L13 0 ; 95.90899999999999 0.0069196 10825300.0 1483.0 1779.56 1591.33 1271.81 2096.92 1772.15 1457.98 1542.03 2598.5 2304.54 2532.5 False True 1733.2941441310693 1870.1320028846794 1817.0045226498762 1583.4035070937205 1788.4658457731261 1959.6777367420361 1722.8760936011956 1760.6174747688178 2009.9438989518274 1783.9428134274585 1903.610356555721 0.9105298981810481 0.9824132320168634 0.9545044322712426 0.8317897103473614 0.9395125633845939 1.0294531808955696 0.9050571130104929 0.9248833243134766 1.0558588799592896 0.9371365349446923 1.0 10.894522493249246 -8.754249618720328 24.999516674239782 1.0263778054018347 0.9359053455375551 0.15561303332207288 0.05506948512608652 119.88741226785855 416860.2840692757 0.008522151242746598 0.009564717907640845 1.7609636093428931e-09 8.754249618720328 -0.09047245986427954 GFSLEELR ddPTM_A549_PD325901_60min_R1 4 GFSLEELR 8 0 P26373;P26373-2;J3QSB4 P26373 RPL13 60S ribosomal protein L13 0 ;;; 111.82 0.0041192 16726800.0 4353.32 3696.0299999999997 4399.77 4101.63 4223.91 4496.19 3832.36 4008.7700000000004 4464.8 4398.65 4314.13 False True 4795.265841655198 4007.5074193184123 4698.364850166314 4354.978369622405 3927.2371332984353 4459.574519347043 3978.202556947859 3928.811937530773 4277.159982760236 4120.918488321693 3783.519359523295 1.2674088291857921 1.0592009815494479 1.2417974916238528 1.1510390078117934 1.037985209039144 1.1786842078981532 1.0514555837898747 1.038401436387994 1.1304712825096095 1.0891760016898417 1.0 11.885513111797486 -2.0000000043068824 0.01608145367407764 1.0334953116905915e-11 2.496022003681978 0.3141816666163999 0.06960495788348937 2761.3250125972454 3.3335346017468273 202.25621046358484 329.8510571093456 0.009999999900830368 2.0000000043068824 2.496022003671643 GFSQYGVSGS(ph)PTK ddPTM_A549_MK2206_60min_R1 3 GFSQYGVSGSPTK 13 0 Q9NXC5 Q9NXC5 MIOS WD repeat-containing protein mio 1 GFSQYGVS(0.456)GS(0.543)PT(0.001)K;GFSQYGVS(0.007)GS(0.992)PT(0.001)K;GFSQYGVS(0.282)GS(0.69)PT(0.028)K 210.37 2.3526999999999997e-37 69244000.0 10871.1 12978.4 12005.900000000001 11188.8 15180.5 12821.7 11406.0 12269.7 17917.4 16454.2 16463.7 True False 12705.875907122901 13638.945124771593 13708.517151365317 13930.056502284313 12947.468559486759 14178.483783644364 13478.322558344587 14008.967549380337 13859.137508208369 12737.184792061793 12375.30891499562 1.026711817409804 1.102109468010514 1.1077313096204169 1.1256330325140207 1.0462339686565587 1.1457074632265358 1.0891301906825457 1.1320095236091563 1.119902347764001 1.0292417651593064 1.0 13.595176918040261 -10.753607252087559 0.9721742709291166 0.9991636605438802 1.101648608293679 0.46087453262392397 0.03487440068031518 0.3229011407671518 0.535096866581627 0.023123550485884325 0.005717887378167442 1.763570184589493e-11 10.753607252087559 0.10248494774979877 GFSQYGVSGS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 GFSQYGVSGSPTK 13 0 Q9NXC5 Q9NXC5 MIOS WD repeat-containing protein mio 1 GFS(0.001)QYGVS(0.49)GS(0.507)PT(0.002)K;GFSQYGVS(0.017)GS(0.982)PT(0.001)K 180.27 6.8226e-23 124130000.0 10292.400000000001 10234.3 10813.0 11084.900000000001 12426.900000000001 12239.8 12144.099999999999 12736.3 11591.8 10567.7 10881.3 True False 11337.27687113558 11096.780378278978 11546.8352038512 11769.589097365533 11554.077414477659 12140.123126892755 12606.250371006501 12482.264505065938 11104.636957570356 9900.453618505037 9542.969082243892 1.1880240597478477 1.1628226270717132 1.2099835076837668 1.2333257077469315 1.2107424130688773 1.272153668555969 1.3209987648877852 1.3080063864286264 1.1636459116515612 1.037460514980217 1.0 13.220222483157592 -9.815452410791282 0.899175937851777 1.021323013514039 1.234614739825168 0.7226528737759104 0.05054341005676728 0.20552521628471168 0.3436346865732045 0.020896834467724938 0.011816925295158888 1.5294933363671664e-10 9.815452410791282 0.21329172631112892 GFSQYGVSGSPT(ph)K ddPTM_A549_MK2206_60min_R1 1 GFSQYGVSGSPTK 13 0 Q9NXC5 Q9NXC5 MIOS WD repeat-containing protein mio 1 GFSQYGVS(0.011)GS(0.386)PT(0.603)K 79.46600000000001 0.00080507 1835100.0 1527.9 2180.6 1365.2 1360.4 2194.4 1794.3 2070.8 1849.9 2578.6 2654.9 2538.3 True False 1785.7721664314647 2291.5832259043423 1558.80588835855 1693.698061070677 1871.606666904102 1984.171635040056 2447.0375551306306 2112.128990081148 1994.551217178057 2055.156246091872 1907.9700564838643 0.9359539791323591 1.2010582755829124 0.8169970398965393 0.8876963531555301 0.980941320616543 1.0399385610362362 1.2825345695624786 1.107003216797606 1.0453786789787205 1.0771428194629282 1.0 10.897822814652672 -7.245256483637237 4.9972471970342545 1.0521071173620493 0.9644636682374579 0.1952173724360169 0.1144737998284716 0.35039792002863285 26.063185428004118 0.0177702338881716 0.030323186878128627 5.6851707947937654e-08 7.245256483637237 -0.08764344912459143 GFSVVADT(ph)PELQR ddPTM_A549_MK2206_60min_R1 2 GFSVVADTPELQR 13 0 C9J9W2;Q14847;Q14847-2;Q14847-3 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 GFS(0.002)VVADT(0.998)PELQR;GFSVVADT(1)PELQR 188.09 2.3931e-25 462620000.0 15027.7 18954.1 16244.9 16002.400000000001 24200.0 20096.0 17149.0 18347.6 25841.0 24612.0 24759.0 True False 17564.00836800975 19918.78273049322 18548.6710927306 19922.988718375043 20640.212057546163 22222.545381354834 20264.75131974849 20948.428487168443 19988.054759597522 19052.13210622364 18610.65698636251 0.9437607915121038 1.0702890685207553 0.9966693333998186 1.0705150674140187 1.1090533812251155 1.1940763508584913 1.0888788791603683 1.125614668118326 1.0740112385201843 1.0237216300415741 1.0 14.183841365319267 -5.258438104687557 23.883963551163706 1.0606609420445647 0.9437607107010944 0.28159757200322155 0.056136167836135314 184.62188408450965 1469057.250186319 0.008809923242291379 0.08509805548381078 5.515207990970123e-06 5.258438104687557 -0.11690023134347038 GFSVVADT(ph)PELQR ddPTM_A549_PD325901_60min_R1 4 GFSVVADTPELQR 13 0 C9J9W2;Q14847;Q14847-2;Q14847-3 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 GFS(0.048)VVADT(0.952)PELQR;GFS(0.003)VVADT(0.997)PELQR;GFS(0.001)VVADT(0.999)PELQR;GFSVVADT(1)PELQR 279.41 2.7762999999999995e-98 936340000.0 69775.0 68137.0 73409.0 72879.0 84869.0 77265.0 77919.0 81242.0 81727.0 77411.0 82140.0 True False 76858.50663435996 73879.1441168223 78390.97618417774 77380.570309782 78908.09422215553 76635.77945712909 80884.25018391288 79621.5645768839 78292.29840329819 72523.25624895617 72037.30072836086 1.066926520805922 1.0255679123154084 1.0881997991537107 1.0741736506975685 1.0953782752036079 1.0638346895604573 1.1228106739994632 1.1052824546705584 1.0868299840734421 1.0067458874177941 1.0 16.136456503342693 -10.610965480727268 0.9122697777294366 1.00042615274631 1.080970204888727 0.604387070463245 0.024082449323944672 0.32082218064904855 0.48021802455822715 0.016672640046343404 0.004643891862031363 2.4492579098531144e-11 10.610965480727268 0.080544052142417 GFTECEMTKS(ph)SPLK ddPTM_A549_MK2206_60min_R1 3 GFTECEMTKSSPLK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 GFTECEMT(0.003)KS(0.621)S(0.376)PLK;GFT(0.001)ECEMT(0.025)KS(0.576)S(0.399)PLK;GFTECEMT(0.029)KS(0.486)S(0.486)PLK 91.65700000000001 1.4625e-05 100843000.0 18237.2 21854.2 19064.3 17593.4 23988.0 22052.1 19374.5 20128.5 27143.6 28530.800000000003 26414.600000000002 True False 21315.19350326847 22966.4854331646 21767.904407730664 21903.783789797748 20459.396976711447 24385.638585000743 22894.59586240988 22981.776515945952 20995.61793942229 22085.67246449883 19855.125814127052 1.0735360582858946 1.1567030926000879 1.0963367652015914 1.1031803069317778 1.0304340132740157 1.2281784972447871 1.1530823867215299 1.157473225356964 1.0574406899241993 1.1123410987798794 1.0 14.277223882232132 -9.08417001333755 2.050738431674403 1.020215679518195 1.1251036893011581 0.14908931048255603 0.057582452858293845 0.19527898205245675 1.6835046973872252 0.010193423248307937 0.009862153506379315 8.238155526604217e-10 9.08417001333755 0.1048880097829632 GFTECEMTKS(ph)SPLK ddPTM_A549_PD325901_60min_R1 3 GFTECEMTKSSPLK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 GFTECEMT(0.005)KS(0.669)S(0.327)PLK;GFTECEMT(0.02)KS(0.915)S(0.064)PLK;GFTECEMT(0.002)KS(0.598)S(0.4)PLK 124.78 2.2451000000000002e-07 320502000.0 54751.6 53748.0 60158.5 55613.7 54062.8 51384.7 57039.2 60464.0 39671.0 52560.2 58556.7 True False 60309.942126002396 58277.5325886224 64241.21757244813 59048.831941123295 50265.61543453497 50966.24003974298 59209.857969047895 59257.998086909574 38003.765829618635 49241.54000202016 51354.59712150487 1.174382538398835 1.134806538365745 1.2509341163840413 1.1498256290749176 0.9787948548326965 0.9924377348177217 1.1529612009019854 1.1538986071043509 0.7400265596418136 0.9588535936814923 1.0 15.648205807943718 -8.745570194613695 24.99979987573429 0.8772347609157437 1.1207961557190511 0.5183128709870353 0.09543017797033121 153.69716281892374 242129.4238325644 0.020236268089109 0.02290921887923639 1.7965106883524628e-09 8.745570194613695 0.2435613948033074 GFTECEMTKSS(ph)PLK ddPTM_A549_MK2206_60min_R1 4 GFTECEMTKSSPLK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 GFTECEMT(0.002)KS(0.268)S(0.73)PLK;GFTECEMTKS(0.128)S(0.872)PLK;GFTECEMT(0.001)KS(0.4)S(0.6)PLK;GFTECEMTKS(0.176)S(0.824)PLK 138.39 5.7957e-10 78461300.0 20821.6 21988.9 21316.9 19252.6 26401.0 22372.1 21569.4 19831.1 28735.2 29519.1 28570.0 True False 24335.77704075488 23108.041087814374 24339.956959823026 23969.48786428205 22517.44787319322 24739.500772601914 25488.280781164118 22642.21915519665 22226.723080685217 22850.71480809468 21475.28050811331 1.1331994956508664 1.0760297672984627 1.1333941342757992 1.1161431793743712 1.0485286962694707 1.1519989582094348 1.1868660235443587 1.0543386917177857 1.0349910480698035 1.0640473263882042 1.0 14.39038935538448 -8.509304894278761 4.46845471339216 1.01729118094928 1.1183298331317493 0.5130254109631538 0.03801159840032287 0.09871687174699763 4.909484718197132 0.006162053626671176 0.0072520327104365085 3.0952455345485617e-09 8.509304894278761 0.10103865218246932 GFTECEMTKSS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 GFTECEMTKSSPLK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 GFTECEMTKS(0.002)S(0.998)PLK 168.05 5.2233000000000004e-23 45021000.0 9419.0 9414.8 9189.3 10199.0 9478.7 8413.5 10170.0 10876.0 7494.3 9503.8 10355.0 True False 10375.209946098676 10208.218237243467 9812.941157749909 10828.96906639041 8812.9488117398 8344.983245487036 10557.024915237533 10659.069647943055 7179.340633130274 8903.72844607134 9081.400645753307 1.1424680344821463 1.124079713630638 1.0805537097780933 1.1924337983540358 0.9704393799497171 0.918909270828103 1.1624886211990069 1.1737252945587757 0.7905543333216464 0.9804355950571291 1.0 13.148699109584149 -8.756238284860206 24.999994555071577 0.9010951008911464 1.0914732663175113 0.3895454641682312 0.09463252259941901 96.56171891248144 464140.5937052 0.018610421476127955 0.02079293762152071 1.7529184621259033e-09 8.756238284860206 0.19037816542636488 GFTIPEAFR ddPTM_A549_MK2206_60min_R1 2 GFTIPEAFR 9 0 O00299 O00299 CLIC1 Chloride intracellular channel protein 1 0 ; 87.181 0.0031973 4246400.0 2045.83 2051.32 2098.51 1796.33 2199.52 1826.25 1782.88 2042.29 3183.6 2809.2 2621.6 False True 2391.116088258708 2155.7234261038693 2396.11027305838 2236.430930640317 1875.9735216865256 2019.5025628333626 2106.806218027476 2331.7908617508133 2462.519683164533 2174.599768925867 1970.5843675208196 1.2134045756523262 1.0939513484601382 1.215938943062312 1.1349074759250006 0.9519884317598016 1.0248242075390492 1.069127641907581 1.183299177738036 1.2496393068735312 1.103530406902455 1.0 10.944407802216142 -2.737277892807573 0.860949919929018 1.1078511263899988 9.906529739588347 0.11664980573449457 0.08670483196433879 407.3372156249171 4.2572819329364275 0.017071985300450742 6844.5147127386645 0.0018311423510050516 2.737277892807573 8.798678613198348 GFTIPEAFR ddPTM_A549_PD325901_60min_R1 2 GFTIPEAFR 9 0 O00299 O00299 CLIC1 Chloride intracellular channel protein 1 0 ; 127.02 0.00014818 7863100.0 2737.1000000000004 2471.44 2861.2 2735.7 3527.7000000000003 2623.8 2729.4 2788.0 3361.4 3280.4 2765.5 False True 3014.9683770534784 2679.716922319433 3055.3782377933085 2904.6779757745117 3279.926521904323 2602.432642718118 2833.268810584987 2732.391152856311 3220.1320475833772 3073.2749841634322 2425.3610319488935 1.2431008568777109 1.1048734134918266 1.2597622364445125 1.1976270491327488 1.3523456832605023 1.073008351514141 1.168184354107611 1.1265915122998014 1.3276918385201593 1.267141239460712 1.0 11.2439838031922 -7.290419916414614 24.90518065686866 1.1520121240604617 1.224188427791441 0.10869383569159874 0.09879462756435965 1535.8265007170112 1319848.7028229837 0.01904530645599659 0.030449484105608222 5.123657414227062e-08 7.290419916414614 0.07217630373097927 GFVLHK ddPTM_A549_PD325901_60min_R1 1 GFVLHK 6 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 74.949 0.049532 2583100.0 1077.9 643.52 695.56 764.28 819.42 963.21 884.04 678.51 939.33 862.65 1013.6 False True 1187.3276144919605 697.7516888336361 742.764884342064 811.4878397941819 761.8667660455362 955.3659371112577 917.6826259652499 664.9765857692024 899.8532267080656 808.1821317792296 888.9336257397931 1.3356763431058605 0.7849311451717775 0.835568441596431 0.9128778755768645 0.8570569770172564 1.0747325890796153 1.0323409975649545 0.7480610098597542 1.012283932851775 0.9091591412200657 1.0 9.795931890729722 GFVQVDDGRK ddPTM_A549_PD325901_60min_R1 1 GFVQVDDGRK 10 1 P54136-2;P54136 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 0 64.297 0.006183 1908400.0 980.7 1139.0 1158.7 889.28 1021.1 1094.0 960.88 1139.2 1302.7 1266.8 1110.3 False True 1080.2599420468175 1234.987527320847 1237.3363498291303 944.2088058985851 949.3814586037654 1085.0908267145446 997.4468142137109 1116.4777623148884 1247.9520492612792 1186.81403180656 973.7401387715983 1.1093924333956255 1.2682927180950145 1.2707048837383519 0.9696722650149066 0.9749844140156715 1.1143535975454586 1.0243459979702791 1.1465869772230586 1.2816068677579702 1.2188200779149976 1.0 9.92739300261029 -6.225329841413623 24.95003773795363 1.1074825445129506 1.2213462842450178 0.2145831642062036 0.10290208784958617 917.1727855802247 633723.4294081683 0.017522798918416644 0.0463592559171032 5.952099170773739e-07 6.225329841413623 0.1138637397320672 GGAAGEDEAGGPEGDPEEEDS(ph)QAETK ddPTM_A549_PD325901_60min_R1 1 GGAAGEDEAGGPEGDPEEEDSQAETK 26 0 O75410-9;O75410;O75410-2;E5RJG6;O75410-10;O75410-6 O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 GGAAGEDEAGGPEGDPEEEDS(0.997)QAET(0.003)K 84.641 3.9585e-07 3118100.0 353.3 701.48 491.21 496.1 699.04 776.57 767.29 714.7 607.75 682.61 819.47 True False 389.16675591428657 760.5961814442744 524.5464644856877 526.7429702751532 649.9418419570817 770.2458713909632 796.4896408271989 700.4447478286966 582.2083810075552 639.5098881050486 718.6803850483305 0.5415018470110541 1.0583232787035437 0.72987446909437 0.7329307731693975 0.9043545023332921 1.0717502347572279 1.1082668421145732 0.9746262210587427 0.8101075152738477 0.8898390736823049 1.0 9.489206500879636 -6.890266300675218 5.7803807668888565 0.941912830765864 0.7849131770311935 0.31820368505124697 0.13783708463323435 0.2610332481215033 12.41776917892879 0.020760511041001725 0.03968190939701172 1.2874598650128705e-07 6.890266300675218 -0.1569996537346705 GGAAGGALPTS(ph)PGPALGAK ddPTM_A549_MK2206_60min_R1 2 GGAAGGALPTSPGPALGAK 19 0 Q9UPR0 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 GGAAGGALPT(0.022)S(0.978)PGPALGAK;GGAAGGALPT(0.032)S(0.968)PGPALGAK 133.48 1.1817e-16 9667300.0 3563.1000000000004 3859.8 3775.7 4049.1 5588.6 4651.1 4254.6 3760.9 5969.700000000001 5761.4 6369.5 True False 4164.464170568719 4056.2473334612437 4311.151034775404 5041.129681771006 4766.524343173657 5143.276314849694 5027.605747565567 4294.019092273201 4617.572481652001 4459.895738533918 4787.777360743004 0.8698115757668493 0.847208846158996 0.9004493546680639 1.052916479179952 0.9955609845721715 1.0742513545056576 1.0500918001720416 0.8968710883429263 0.9644501265897234 0.9315169446061706 1.0 12.225140350890864 -6.0689702768083755 5.286302882824379 0.9924788294604711 0.8613735629027125 0.5519295764300445 0.05018843427417516 0.1140428194371312 6.0415965723907314 0.006830957917211851 0.018946624012368414 8.531585023392333e-07 6.0689702768083755 -0.13110526655775856 GGAAGGALPTS(ph)PGPALGAK ddPTM_A549_PD325901_60min_R1 1 GGAAGGALPTSPGPALGAK 19 0 Q9UPR0 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 GGAAGGALPT(0.147)S(0.853)PGPALGAK 130.27 3.8894e-23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(ph)VSGTDVQEECR ddPTM_A549_PD325901_60min_R1 2 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECR 41 2 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(0.906)VS(0.044)GT(0.05)DVQEECR;GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(0.998)VS(0.002)GTDVQEECR 225.65 1.3032999999999995e-128 120524000.0 4161.2 3508.9 4049.0 3920.0 4604.7 3705.6 4273.4 4159.700000000001 4581.7 4948.9 4653.700000000001 True False 4583.6419606864665 3804.6073174856224 4323.789488614951 4162.129497034065 4281.281757352616 3675.422822187764 4436.026575494208 4076.7315202784803 4389.147082290935 4636.42560941544 4081.324402234881 1.1230770967817514 0.9321991938210715 1.0594084327742483 1.0197987434556626 1.0489932520454002 0.9005466020233897 1.0869085959119293 0.99887465893329 1.0754222526117978 1.136010067437078 1.0 11.994821671782262 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(ph)VSGTDVQEECREK ddPTM_A549_MK2206_60min_R1 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECREK 43 3 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(0.99)VS(0.008)GT(0.002)DVQEECREK 118.86 1.2843e-22 18592000.0 1212.5 1075.4 796.73 727.95 1863.9 913.86 947.29 923.73 1310.6 1495.8 1699.9 True False 1417.1403572211202 1130.1332665952173 909.7182943392236 906.2977826789174 1589.7227790934005 1010.5640586288279 1119.4003310796281 1054.671556304481 1013.7511925981387 1157.8977411217834 1277.7679151467207 1.1090749270053442 0.8844589484510955 0.7119589430563878 0.709282000225253 1.244140473593641 0.7908823242856188 0.8760591949525451 0.825401501949106 0.7933766222966507 0.9061878353619693 1.0 10.31941010367553 -11.053080089481696 1.3862345590771017 0.9993561529386725 0.8685265633386363 0.011051079348315396 0.15676567050999315 0.8798680281370813 3.039710039086397 0.10539410493624252 0.023969031756930045 8.84952398191228e-12 11.053080089481696 -0.1308295896000362 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGT(ph)DVQEECR ddPTM_A549_MK2206_60min_R1 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECR 41 2 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(0.269)VS(0.312)GT(0.419)DVQEECR 75.002 1.3298e-06 55326000.0 403.38 316.42 631.48 405.13 893.61 714.1 362.08 591.15 748.1 835.11 471.8 True False 471.4606823058601 332.5244264609064 721.0333594935959 504.38686818697704 762.161152758009 789.6655880187833 427.8652491605652 674.9473228209479 578.6565444702178 646.4580709909158 354.6390389824242 1.3294099929286847 0.9376419116604537 2.0331471728619532 1.422254215537659 2.1491180298280175 2.226674170685193 1.2064809626944937 1.903195217192087 1.6316775111126325 1.822862121569628 1.0 8.470207547912846 -10.465442526006445 0.7795048425027364 0.995083112438042 1.6586260680531064 0.0 0.4554994068405741 0.6952273197691352 0.755923558281731 0.26769878661363866 0.0759998272650944 3.4241869989451854e-11 10.465442526006445 0.6635429556150644 GGAEDERGEDGDGEQDAEKDGS(ph)GPEGGIVEPR ddPTM_A549_MK2206_60min_R1 3 GGAEDERGEDGDGEQDAEKDGSGPEGGIVEPR 32 2 K7EKB8;K7ESN2;Q9C0B9 K7EKB8 ZCCHC2 Zinc finger CCHC domain-containing protein 2 1 GGAEDERGEDGDGEQDAEKDGS(1)GPEGGIVEPR;GGAEDERGEDGDGEQDAEKDGS(1)GPEGGIVEPR;GGAEDERGEDGDGEQDAEKDGS(1)GPEGGIVEPR 164.32 9.035899999999999e-52 58358600.0 1930.5400000000002 2209.9700000000003 2046.8799999999999 1622.4399999999998 2605.51 2144.16 2077.49 1926.8400000000001 3007.59 2855.73 3257.58 True False 2256.367954828588 2322.4480334549303 2337.1583627038895 2019.9378728340994 2222.2429304982275 2371.0535880217826 2454.9430415338684 2199.9754707000166 2326.375667134319 2210.6186096093793 2448.6329813657585 0.9214806677847115 0.948467186029469 0.9544747540729062 0.8249247184882119 0.907544310400794 0.968317263577531 1.0025769726276375 0.898450477242592 0.9500711968017155 0.9027970408110637 1.0 11.257760833311274 -7.270111916259958 10.55041536564562 0.9710550014599024 0.9110231994274699 0.11787973691180786 0.04576047869406209 0.29949020426618217 350.3155220673249 0.006519643281078883 0.010675447179145956 5.368934228721369e-08 7.270111916259958 -0.060031802032432524 GGAEDERGEDGDGEQDAEKDGS(ph)GPEGGIVEPR ddPTM_A549_PD325901_60min_R1 4 GGAEDERGEDGDGEQDAEKDGSGPEGGIVEPR 32 2 K7EKB8;K7ESN2;Q9C0B9 K7EKB8 ZCCHC2 Zinc finger CCHC domain-containing protein 2 1 GGAEDERGEDGDGEQDAEKDGS(1)GPEGGIVEPR;GGAEDERGEDGDGEQDAEKDGS(1)GPEGGIVEPR;GGAEDERGEDGDGEQDAEKDGS(1)GPEGGIVEPR;GGAEDERGEDGDGEQDAEKDGS(1)GPEGGIVEPR 99.235 1.0972e-10 86002000.0 2017.1100000000001 2176.05 2007.28 2233.81 2598.4500000000003 2166.41 2137.85 1984.45 2707.51 2413.8 2509.91 True False 2221.8855222821016 2359.4333703481407 2143.506091555203 2371.787370349405 2415.9438361658554 2148.767475230946 2219.207051626408 1944.8685879790917 2593.722770319648 2261.392256058316 2201.206981630389 1.009394182748047 1.0718816494942047 0.9737867040415945 1.0774940249338438 1.0975541402182976 0.9761769307307021 1.0081773636674034 0.8835464380267264 1.1783184370960567 1.0273419423662509 1.0 11.104079094285886 -8.784289712299417 24.9985761858026 1.0842058959004228 1.0166367552228408 0.10075354938957015 0.06993163615323358 368.4326527857118 403068.2188016879 0.014314786573294687 0.015244236276214481 1.643275149646103e-09 8.784289712299417 -0.06756914067758202 GGAES(ph)HTFK ddPTM_A549_PD325901_60min_R1 1 GGAESHTFK 9 0 P50238;K4DIB9;H3BRQ4 P50238 CRIP1 Cysteine-rich protein 1 1 GGAES(0.953)HT(0.047)FK 50.284 0.008748700000000002 6016500.0 2075.8 1826.7 1728.0 1625.8 2226.5 1989.5 2190.4 2325.7 1823.5 1958.6 2186.0 True False 2286.5336878768057 1980.6424198042064 1845.2724713081343 1726.221973540301 2070.1183210080158 1973.298171616623 2273.7568706328707 2279.3120890236437 1746.8646363920657 1834.9336617432318 1917.135858195726 1.1926821347073082 1.0331257491935122 0.9625152351199436 0.9004171332776072 1.0797974030678588 1.0292949053040785 1.186017600637219 1.188915266114094 0.9111845824197834 0.9571223937515533 1.0 10.90473686214818 -8.794645006777476 24.999616628784597 0.9580593843135082 1.0636489560854958 0.24000834881503097 0.09071323889671777 225.18646013960398 169535.84757579456 0.017034771531910273 0.01813471057012791 1.6045564225900113e-09 8.794645006777476 0.10558957177198758 GGAGAWLGGPAAS(ph)LSPPKGSSASQGGSK ddPTM_A549_MK2206_60min_R1 1 GGAGAWLGGPAASLSPPKGSSASQGGSK 28 1 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GGAGAWLGGPAAS(0.551)LS(0.43)PPKGS(0.006)S(0.006)AS(0.006)QGGS(0.002)K 58.861000000000004 0.00051237 8443400.0 1256.0 943.07 1106.7 858.73 1511.5 1255.3 1233.6 1291.7 1703.6 1483.9 1687.6 True False 1467.9820937482295 991.0682348223464 1263.6467013231813 1069.1188885498545 1289.1603522719429 1388.135012799298 1457.7291520229596 1474.8024306653438 1317.73732009018 1148.685959386692 1268.5223446094512 1.1572378681277289 0.7812777118462769 0.9961564387832909 0.8428065087643463 1.0162693292319147 1.0942929138758473 1.14915528151123 1.1626144678747472 1.0387970899289762 0.905530725783428 1.0 10.308933216892735 -6.98225197020736 23.805622810194883 1.0467773563898661 0.9355590318319423 0.1838785366017811 0.11019772681908006 167.89009025064078 225190.2856520916 0.014275737239900495 0.026973610425540778 1.0417128700978728e-07 6.98225197020736 -0.1112183245579238 GGAGAWLGGPAASLS(ph)PPKGSSASQGGSK ddPTM_A549_MK2206_60min_R1 1 GGAGAWLGGPAASLSPPKGSSASQGGSK 28 1 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GGAGAWLGGPAAS(0.017)LS(0.957)PPKGS(0.006)S(0.008)AS(0.009)QGGS(0.004)K 66.01 0.00013703 5148200.0 1153.8 1306.8 1586.6 1236.3 1850.2 1248.9 1201.0 1129.6 2061.4 1626.3 1907.3 True False 1348.533232298332 1373.310538205905 1811.6037375254 1539.1935554996155 1578.0380309451186 1381.0577690472749 1419.206154004196 1289.7242592549137 1594.4961913793704 1258.9177004855967 1433.664771197918 0.9406196339549773 0.9579021301181982 1.2636173908435302 1.073607712501383 1.100702244100319 0.9633059253407708 0.989914924685189 0.8995996031745044 1.1121820270767115 0.8781116239842393 1.0 10.485492007816957 GGAGAWLGGPAASLS(ph)PPKGSSASQGGSK ddPTM_A549_PD325901_60min_R1 1 GGAGAWLGGPAASLSPPKGSSASQGGSK 28 1 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GGAGAWLGGPAAS(0.149)LS(0.827)PPKGS(0.007)S(0.007)AS(0.008)QGGS(0.002)K 73.126 8.837299999999999e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GGAGTGGTGS(ph)PQASLEILAPEDSQVLQQATR ddPTM_A549_PD325901_60min_R1 1 GGAGTGGTGSPQASLEILAPEDSQVLQQATR 31 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3;D6RCL7;D6RIC7;D6RBK2;D6RJA4;D6RF61 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 GGAGT(0.017)GGT(0.058)GS(0.924)PQAS(0.002)LEILAPEDSQVLQQATR 74.196 5.3133000000000004e-06 1251800.0 335.15 237.62 308.34 389.45 480.09 410.74 406.2 363.36 437.09 612.88 403.61 True False 369.1741812756101 257.6450713274623 329.2658065990453 413.5054419948767 446.37013462058735 407.39506962041315 421.658163281169 356.1124997495944 418.7206273214189 574.1826522052446 353.9685286945913 1.0429576398701208 0.7278756455485957 0.9302120948812942 1.1681983240709364 1.261044693060047 1.1509358504917224 1.1912306578107714 1.0060569538848831 1.1829317958453207 1.622129103744861 1.0 8.467477285917479 -6.139016341729726 5.009191196385087 1.1110424153228373 0.8736451831797228 0.26258609515232 0.18441680633663304 0.15201261525166498 5.577746388060869 0.01527194682830704 0.04190015373678583 7.260786358721114e-07 6.139016341729726 -0.23739723214311448 GGAGVGSMTK ddPTM_A549_PD325901_60min_R1 2 GGAGVGSMTK 10 0 P39019 P39019 RPS19 40S ribosomal protein S19 0 ; 46.016000000000005 0.024179 7893300.0 2715.3999999999996 2208.1 2978.4 2661.6 3095.5 2984.9 2581.1 3198.3 3292.0 2972.0 3515.8 False True 2991.0654090281737 2394.184336327625 3180.5321345741613 2826.0009870678223 2878.082758895265 2960.59196404044 2679.325172932114 3134.507397482188 3153.648688238376 2784.3474127953054 3083.378888492467 0.9700609354858016 0.7764807449590456 1.031508695361534 0.9165273193037646 0.9334184552007568 0.9601778020501203 0.8689574878169112 1.016581974139 1.0227898686107517 0.903018251563834 1.0 11.59029646472123 -8.283462164380916 24.248569656418642 1.0114990950410025 0.9226733591827116 0.1256490850078531 0.06872993572639802 438.45266954393554 482764.5966861247 0.00908283866343857 0.010985650655375268 5.20640364875125e-09 8.283462164380916 -0.0888257358582909 GGALLLLRNS(ph)PQPLR ddPTM_A549_MK2206_60min_R1 2 GGALLLLRNSPQPLR 15 1 Q9UL54-2 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 GGALLLLRNS(1)PQPLR;GGALLLLRNS(1)PQPLR 81.428 9.4569e-05 10048500.0 1244.54 1312.93 1163.9499999999998 1346.48 1708.6599999999999 1155.1399999999999 1206.35 1339.61 1781.4700000000003 1633.84 1693.67 True False 1454.5879259183275 1379.752529022557 1329.0156121849805 1676.3676604457833 1457.3183774482147 1277.3761480801259 1425.5281797526739 1529.503819883566 1377.969889423018 1264.7544092488383 1273.0849960859734 1.1425693731293467 1.0837866546731183 1.0439331358636403 1.3167759148836717 1.1447141250809303 1.0033706720347386 1.1197431311620027 1.2014153215110832 1.0823864028399575 0.9934563781187061 1.0 10.31411302702644 -9.76757249363965 0.7126703905465833 1.005674569693321 1.1305436703239864 0.2865224709881058 0.07882298977999187 0.6204566380457472 0.6632880321303606 0.035203680354730406 0.01784279244896969 1.707762631790686e-10 9.76757249363965 0.12486910063066547 GGALLLLRNS(ph)PQPLR ddPTM_A549_PD325901_60min_R1 2 GGALLLLRNSPQPLR 15 1 Q9UL54-2 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 GGALLLLRNS(1)PQPLR;GGALLLLRNS(1)PQPLR 94.544 6.0838e-06 17688600.0 2818.2 2656.0 3368.3 3317.9 4418.1 4253.9 3467.1000000000004 4405.5 4119.1 4228.700000000001 3896.1 True False 3104.301589350812 2879.830441232812 3596.8930932333287 3522.8391475023795 4107.787897617566 4219.25764877605 3599.0423877699186 4317.628846452108 3945.9885515561023 3961.6991603255437 3416.904399412793 0.9085128603200888 0.8428185587304465 1.0526759524941545 1.0310031349158588 1.2021957355094584 1.2348187586111992 1.0533049705424673 1.2636083254755701 1.154843124154786 1.1594410311878716 1.0 11.73847416824358 -5.910072513634263 2.5222014419784555 1.1051716277182209 0.8716216472443865 0.5552539352168779 0.08540367149912158 0.19835069115376444 2.4855034123882302 0.013790470014410536 0.05651388167659309 1.2300633714438104e-06 5.910072513634263 -0.23354998047383435 GGALLLLRNS(ph)PQPLRR ddPTM_A549_MK2206_60min_R1 2 GGALLLLRNSPQPLRR 16 2 Q9UL54-2 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 GGALLLLRNS(1)PQPLRR;GGALLLLRNS(1)PQPLRR 103.61 2.1334e-07 9867000.0 1280.46 1257.73 1569.9 1330.8899999999999 2355.7 1237.97 1688.21 1012.22 2458.2 1873.46 1738.25 True False 1496.5703437586449 1321.7430848008203 1792.5354264093814 1656.9581097459227 2009.1796505769194 1368.9711637020218 1994.9359044558053 1155.7052847937407 1901.4216249387644 1450.2440848255208 1306.5945517405653 1.1453976612446497 1.0115939049646847 1.3719140524667546 1.268150175231195 1.5377223545746561 1.0477398377931104 1.5268209268118207 0.884517146695722 1.4552499261578942 1.1099419348516297 1.0 10.351595813752834 -11.10744319402677 1.4466606594919769 0.9998771715887004 1.2745341402029093 0.10086891371603679 0.20759250482936814 0.5376029625786493 2.0103688190042703 0.1416413119805161 0.030712541629778017 7.80830566555236e-12 11.10744319402677 0.27465696861420896 GGALLLLRNS(ph)PQPLRR ddPTM_A549_PD325901_60min_R1 2 GGALLLLRNSPQPLRR 16 2 Q9UL54-2 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 GGALLLLRNS(1)PQPLRR;GGALLLLRNS(1)PQPLRR 143.67 5.525899999999999e-15 24492000.0 1352.76 1624.85 1926.2199999999998 2269.45 2144.7 2402.2 1442.97 2215.75 2261.0 2380.4 1905.5 True False 1490.091199350723 1761.781811911571 2056.9448725018246 2409.628772205092 1994.0636708133343 2382.6372796468727 1497.8830129734824 2171.5551280277514 2165.9780328392985 2230.101137758395 1671.1355799597225 0.8916638585282451 1.0542422966986515 1.2308665419902083 1.441910998186735 1.1932387142767884 1.4257594106782758 0.8963264446859448 1.2994488024006345 1.2961114937732956 1.3344824707832172 1.0 10.706613069288442 -5.466584645801353 3.1775326173429894 1.1838051916231045 0.8968217501506682 0.25574032057995766 0.16338753841622838 0.3294469769495924 5.939867703410668 0.023735187970625092 0.1781502285675584 3.415193806507385e-06 5.466584645801353 -0.28698344147243626 GGAPDPSPGATATPGAPAQPS(ph)SPDAR ddPTM_A549_MK2206_60min_R1 1 GGAPDPSPGATATPGAPAQPSSPDAR 26 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGATATPGAPAQPS(0.575)S(0.425)PDAR 96.12299999999999 2.0775e-09 16745000.0 2760.3 2899.5 2808.6 2554.2 3690.5 3032.5 3060.2 3228.5 4108.3 4122.5 4122.3 True False 3226.171157144296 3047.072165234174 3206.9017126016874 3179.979114662394 3147.6323387757893 3353.3971371894163 3616.19872812959 3686.1497618665844 3177.776609607002 3191.224386799405 3098.619140307857 1.0411641479835971 0.9833645334455136 1.0349454280731876 1.0262568488318489 1.0158177550220202 1.0822230759396414 1.167035561450224 1.189610466777261 1.0255460467114008 1.0298859725246348 1.0 11.597409724918315 -4.924034813971535 18.364220929945162 1.0378486128698818 1.1234093247900905 0.0 0.06532016695797901 224467.74872709144 1104915.1971630305 0.009816686961235832 796574.0386563543 1.1911465193557591e-05 4.924034813971535 0.08556071192020864 GGAPDPSPGATATPGAPAQPS(ph)SPDAR ddPTM_A549_PD325901_60min_R1 2 GGAPDPSPGATATPGAPAQPSSPDAR 26 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGAT(0.001)AT(0.002)PGAPAQPS(0.566)S(0.432)PDAR;GGAPDPSPGAT(0.001)AT(0.003)PGAPAQPS(0.501)S(0.495)PDAR 95.19 2.549e-09 49496000.0 12852.3 14024.8 13055.2 14053.7 15903.5 13651.4 13435.8 14137.5 14407.5 14678.4 14592.3 True False 14157.056034636802 15206.719116039883 13941.204379295114 14921.765130731534 14786.493024096542 13540.227524507247 13947.10672135187 13855.5164718458 13802.002878430869 13751.603318968591 12797.539608211107 1.1062326406517553 1.1882533347490487 1.0893659880021167 1.1659870246588249 1.1554168595508225 1.0580336485787956 1.0898271971280467 1.082670333206539 1.07848877995074 1.0745505573700542 1.0 13.643578851007192 -9.906894803012413 0.172863654341707 0.9259044331822197 1.178322382305092 0.4165296861015291 0.0389693514805183 2.618966386837336 0.19512034465943368 0.18709841969026167 0.07870154568848992 1.239096690397539e-10 9.906894803012413 0.2524179491228722 GGAPDPSPGATATPGAPAQPS(ph)SPDARR ddPTM_A549_MK2206_60min_R1 1 GGAPDPSPGATATPGAPAQPSSPDARR 27 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDARR 120.52 6.1130999999999995e-18 27249000.0 1276.1 1535.8 1955.7 1836.0 2441.4 1316.5 1200.8 1103.2 2731.6 3001.5 3017.3 True False 1491.4744823504097 1613.9656600678215 2233.0476676405046 2285.820082421171 2082.273294103025 1455.8111561780258 1418.9698165930367 1259.5819784083048 2112.8969614688503 2323.4590653677164 2268.0211367563984 0.6576104861542147 0.7116184386076879 0.9845797428652227 1.0078477865026547 0.9181013617364167 0.6418860620761447 0.6256422365720854 0.5553660669184464 0.9316037347388224 1.0244433033329674 1.0 11.147218370158958 -8.97362734304768 23.590590258000002 0.9698254959019256 0.7713937453897847 0.32181627988209793 0.14396304173511962 98.635224484092 88231.42964476395 0.02774650775528326 0.02891582494246244 1.0626069618872287e-09 8.97362734304768 -0.1984317505121409 GGAPDPSPGATATPGAPAQPSS(ph)PDAR ddPTM_A549_MK2206_60min_R1 1 GGAPDPSPGATATPGAPAQPSSPDAR 26 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGATATPGAPAQPS(0.288)S(0.712)PDAR 131.56 2.4773e-24 17163000.0 3855.5 4126.7 4529.7 3630.2 5886.1 3662.2 3835.3 4399.3 5238.7 5673.5 5944.8 True False 4506.214142075074 4336.7314034391675 5172.079572588428 4519.599162965868 5020.262487269522 4049.7315732283855 4532.124365072683 5022.914247291207 4052.1428144848715 4391.8524095831235 4468.54209186671 1.0084305013657435 0.9705025295235657 1.1574422857070636 1.011425890156006 1.1234676509833064 0.906275803152753 1.0142288629935254 1.1240610794365173 0.9068154067207433 0.9828378740298384 1.0 12.125588498640901 -8.7785140532637 24.98547274738615 0.9559961694217318 1.0376949114161271 0.17710162567404897 0.07268488851618067 278.71757184268347 407847.4459507508 0.01271359975575523 0.013551024050611652 1.6652749405552928e-09 8.7785140532637 0.08169874199439531 GGAPDPSPGATATPGAPAQPSS(ph)PDARR ddPTM_A549_MK2206_60min_R1 1 GGAPDPSPGATATPGAPAQPSSPDARR 27 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGATATPGAPAQPS(0.213)S(0.787)PDARR 138.96 2.7371e-25 20350000.0 1240.4 1660.8 1369.8 1536.8 2389.9 1464.0 1489.0 1231.9 2663.5 3060.5 2746.2 True False 1449.7491951316103 1745.3276261496521 1564.0582375282324 1913.3160689895742 2038.3488758813855 1618.9195082754509 1759.5320260718129 1406.5255975355244 2060.2215027354973 2369.1309243904384 2064.242748735764 0.7023152659828901 0.8455050294925681 0.757691041175333 0.9268852077408899 0.987455994276721 0.7842679884751688 0.8523861968992892 0.6813760631577582 0.9980519510107377 1.147699768276479 1.0 11.011396921995201 -8.811093222051152 21.199597864506664 0.999081051353129 0.8255948408344936 0.5163316288011479 0.09628468125679213 15.33474793701133 6546.873403161999 0.014543222597257944 0.015482366159604712 1.5449227836343376e-09 8.811093222051152 -0.17348621051863533 GGAPDPSPGATATPGAPAQPSS(ph)PDARR ddPTM_A549_PD325901_60min_R1 2 GGAPDPSPGATATPGAPAQPSSPDARR 27 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 GGAPDPSPGATATPGAPAQPS(0.193)S(0.807)PDARR;GGAPDPSPGATATPGAPAQPS(0.213)S(0.787)PDARR 143.47 6.482999999999999e-33 62640000.0 5024.2 5032.2 5942.5 5858.7 6938.0 7586.6 5805.700000000001 6523.5 7115.0 5745.8 7611.2 True False 5534.253085379442 5456.281154507437 6345.793785155433 6220.578592926904 6450.6988148006285 7524.817244929217 6026.639090500944 6393.383674913254 6815.9812930789885 5383.0092074156355 6675.070651372048 0.8290928103123354 0.8174117458046544 0.9506706545272398 0.9319120227811036 0.9663865974923725 1.1273015130382935 0.9028577232006046 0.9578001505645647 1.0211099850573082 0.806434791264594 1.0 12.704567391551366 -5.931956590597636 1.066523682696111 1.0041852695069058 0.7949798375806489 0.21985535903087827 0.08118114042272397 0.38014462811998734 0.628386007110483 0.007987823270053712 0.06846876178973987 1.1696162928204257e-06 5.931956590597636 -0.20920543192625685 GGASS(ph)SCCEEEQTQGR ddPTM_A549_MK2206_60min_R1 1 GGASSSCCEEEQTQGR 16 0 Q9UJK0 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog 1 GGAS(0.078)S(0.546)S(0.375)CCEEEQT(0.001)QGR 46.964 0.027132 4982600.0 151.29 132.9 252.42 0.0 278.27 337.19 232.02 0.0 471.78 388.83 280.39 True False 176.82405331462544 139.6640423382038 288.21695161109375 0.0 237.33685162204003 372.8712219913931 274.17503068447405 0.0 364.92258327785 300.9930329458368 210.76142462967755 0.8389773110772883 0.6626641596468767 1.3675033375652634 0.0 1.1260924623139996 1.769162562108098 1.3008786174520248 0.0 1.7314486458755167 1.4281220269539476 1.0 7.719467026445519 -6.982805701140298 24.98366826615962 1.2714467127132199 0.7352308605755764 0.15059467111432245 0.5335437660392588 333.75781582543544 484954.3154569556 0.07883304958426285 0.14895726461104242 1.0403855194457661e-07 6.982805701140298 -0.5362158521376434 GGASS(ph)SCCEEEQTQGR ddPTM_A549_PD325901_60min_R1 2 GGASSSCCEEEQTQGR 16 0 Q9UJK0 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog 1 GGAS(0.077)S(0.504)S(0.419)CCEEEQTQGR;GGAS(0.33)S(0.396)S(0.269)CCEEEQT(0.005)QGR 65.472 0.0027946 7763300.0 336.41 170.87 682.39 352.49 512.8199999999999 568.6700000000001 434.44 586.48 231.98 525.38 526.0799999999999 True False 370.5620955480475 185.26981456831717 728.7010889444197 374.26250673712707 476.8012923329573 564.0389400619374 450.97285193468997 574.7821963153408 222.23068733218054 492.2074171380881 461.3754950958861 0.8031681341702703 0.4015597198759184 1.579410039523179 0.8111885236976996 1.0334343661530296 1.2225160331601814 0.9774529786003607 1.2458013102665666 0.4816698972839793 1.0668260936480694 1.0 8.849797570383233 -8.756453552961538 24.99737826626158 0.7552330121510685 1.0083051367720575 0.02549174753843042 0.31779770955028663 206.6950014229156 1036303.1231721067 0.055017974775934536 0.061442477982779194 1.7520498028640137e-09 8.756453552961538 0.25307212462098894 GGAVERPLT(ph)PAPR ddPTM_A549_MK2206_60min_R1 2 GGAVERPLTPAPR 13 1 H9KVB4;O15417 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GGAVERPLT(1)PAPR;GGAVERPLT(1)PAPR 114.63 7.795900000000001e-06 91629000.0 3513.4 3737.7 4193.0 4119.8 4995.8 3826.8 3531.8999999999996 3396.4 6150.6 6621.6 5710.6 True False 4106.376025617059 3927.932964992508 4787.630449668473 5129.15118494485 4260.924437896245 4231.749435975746 4173.600512345894 3877.850101038766 4757.4989204899375 5125.775961099072 4292.500415457889 0.9566396338202856 0.9150687442795525 1.1153476962815314 1.1949098866651393 0.9926439197424571 0.9858471814555053 0.9723005494224717 0.9034012174056152 1.1083281211476472 1.1941235794970322 1.0 12.067602558523511 -5.742232508933532 24.94372582413702 1.041539341980352 0.9358541238496598 0.19196759336956692 0.08978308486938184 297.5703032681415 386444.4309135118 0.011387215187834202 0.04396235918333077 1.8103706121075376e-06 5.742232508933532 -0.1056852181306922 GGAVERPLT(ph)PAPR ddPTM_A549_PD325901_60min_R1 2 GGAVERPLTPAPR 13 1 H9KVB4;O15417 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GGAVERPLT(1)PAPR;GGAVERPLT(1)PAPR 104.45 4.4663e-05 113879000.0 5057.2 5764.9 4770.7 5659.6 6539.1 5706.0 5832.5 5928.0 5915.5 6699.5 7514.8 True False 5570.603221086129 6250.728354918312 5094.468390549603 6009.180638115811 6079.816174670342 5659.532227818271 6054.458979166466 5809.761389573964 5666.892106705378 6276.492426656177 6590.527240242103 0.8452439414970832 0.948441319952528 0.7729986091920709 0.9117905774553878 0.9225083142888276 0.8587374001371046 0.9186607927507868 0.8815321108301105 0.8598541361157024 0.9523505780131802 1.0 12.686178169691479 -10.800517905828558 0.8569636847223617 1.00650153021419 0.880170202718992 0.3677422120845615 0.047220323287423004 0.44244352229403144 0.5271109514818882 0.037704032656668975 0.007690186661534089 1.583004298578259e-11 10.800517905828558 -0.12633132749519793 GGCPGGEATLS(ph)QPPPR ddPTM_A549_MK2206_60min_R1 2 GGCPGGEATLSQPPPR 16 0 P20290 P20290 BTF3 Transcription factor BTF3 1 GGCPGGEATLS(1)QPPPR;GGCPGGEATLS(1)QPPPR 174.59 3.4988999999999997e-28 94784000.0 19082.9 21019.9 18883.1 14193.2 27340.4 19410.1 20770.4 19264.5 30338.4 27847.8 33393.1 True False 22303.626987888598 22089.723126748006 21561.00752304669 17670.53463715696 23318.66337760889 21464.063898618377 24544.11282358764 21995.301870056934 23466.80084046955 21556.962638862922 25100.671667325107 0.8885669389047636 0.8800451007653068 0.8589812977440684 0.7039865255940401 0.9290055535830162 0.8551191053010466 0.9778269342305301 0.8762833983717416 0.9349072866053041 0.8588201512919983 1.0 14.615438349229644 -8.680879856860193 0.42381906893110366 0.9962756589079795 0.8412387872588274 0.07099066830478773 0.07196940603780529 0.6256574500218172 0.2864818559702221 0.029218762512112858 0.02932104161061103 2.085067616013977e-09 8.680879856860193 -0.15503687164915214 GGCPGGEATLS(ph)QPPPR ddPTM_A549_PD325901_60min_R1 2 GGCPGGEATLSQPPPR 16 0 P20290 P20290 BTF3 Transcription factor BTF3 1 GGCPGGEATLS(1)QPPPR;GGCPGGEATLS(1)QPPPR 230.16 3.5622e-55 89948000.0 7805.4 8982.8 8444.2 9323.8 9516.6 9012.599999999999 8187.1 9463.3 8320.8 9351.0 9846.9 True False 8597.798461968221 9739.812081139336 9017.27419109963 9899.70995011383 8848.186846487708 8939.204373718008 8498.664570653018 9274.547057684764 7971.105712361446 8760.576264148354 8635.79372464203 0.9956002581945201 1.1278421407110522 1.0441743374866697 1.1463578526505611 1.024594510778971 1.0351340778567004 0.9841208395705751 1.07396579323335 0.9230310457295996 1.0144494580909524 1.0 13.076113068088492 -7.804275229831797 0.9523819384751124 0.9676009196427714 1.076367227270443 0.23117854587346298 0.053553515919001975 0.362803401362529 0.6629218433836198 0.009831464774629577 0.016614302146366985 1.5693679177236537e-08 7.804275229831797 0.10876630762767159 GGDAKS(ph)PVLQEK ddPTM_A549_MK2206_60min_R1 3 GGDAKSPVLQEK 12 1 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 1 GGDAKS(1)PVLQEK;GGDAKS(1)PVLQEK;GGDAKS(1)PVLQEK 67.416 0.0013298 127799000.0 9546.3 10791.7 10575.8 9863.7 13379.1 9673.4 10451.0 11306.099999999999 14501.8 14310.8 14968.9 True False 11157.482055373173 11340.95143492246 12075.607467112766 12280.306942798314 11411.0521131866 10697.032767316761 12349.811420064814 12908.774298479095 11217.165454615964 11077.98034071774 11251.709009376866 0.9916255429352852 1.0079314551657195 1.0732242948203945 1.0914170400749115 1.014161680121388 0.9507029339633781 1.097594277435794 1.1472723199401331 0.9969299281796113 0.984559797225973 1.0 13.45785652695588 -8.90518822230236 22.863415544651932 0.9985335494650622 1.0469068883286476 0.1656724808654818 0.05258749729907375 12.14384689263829 2917.1524861264875 0.009372748331350416 0.009977998349904699 1.243975358656482e-09 8.90518822230236 0.04837333886358541 GGDAKS(ph)PVLQEK ddPTM_A549_PD325901_60min_R1 2 GGDAKSPVLQEK 12 1 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 1 GGDAKS(1)PVLQEK;GGDAKS(1)PVLQEK 72.187 0.00057777 275630000.0 26573.0 32070.0 28938.0 37866.0 33859.0 30561.0 33106.0 30770.0 36426.0 30186.0 36084.0 True False 29270.671397991307 34772.65144967479 30901.906698330316 40204.89682007446 31480.860647208774 30312.121348467255 34365.86694629832 30156.268211401955 34895.14189482717 28280.050808425014 31645.896755322312 0.9249436546009229 1.0988044269539181 0.9764901572313046 1.2704616061579188 0.9947849128944093 0.9578531328352786 1.085950169527699 0.9529282246150972 1.1026750850079288 0.8936403675673619 1.0 14.949730829771434 GGDDYS(ph)EDEGDSSVSR ddPTM_A549_MK2206_60min_R1 2 GGDDYSEDEGDSSVSR 16 0 A6NDA1;Q99871-3;Q99871;Q99871-2 A6NDA1 HAUS7 HAUS augmin-like complex subunit 7 1 GGDDY(0.002)S(0.997)EDEGDSSVSR;GGDDYS(1)EDEGDSSVSR 261.17 8.352999999999998e-79 74399000.0 2155.1099999999997 2175.89 2133.0699999999997 1787.6799999999998 3105.94 2214.42 2291.6400000000003 1886.17 2947.92 3453.6 3783.65 True False 2518.8398806192235 2286.63350702238 2435.571400733207 2225.6616802520048 2649.060340413839 2448.748454586968 2708.0013245313694 2153.540373653366 2280.220826860907 2673.429361370632 2844.0652815723784 0.8856477018792798 0.8040017653034268 0.8563697241811095 0.7825634997455188 0.9314344356221218 0.8610028997763179 0.9521586378756453 0.7572049726167864 0.801747006876107 0.9400028117120405 1.0 11.47373886506239 -10.847439169148817 1.08630381850572 1.00029001435944 0.8454143688522466 0.37172792360911533 0.059612204560329334 0.34123736956324446 0.7128403817654633 0.04004848864451139 0.009723867311858427 1.420891220614005e-11 10.847439169148817 -0.15487564550719335 GGDDYS(ph)EDEGDSSVSR ddPTM_A549_PD325901_60min_R1 2 GGDDYSEDEGDSSVSR 16 0 A6NDA1;Q99871-3;Q99871;Q99871-2 A6NDA1 HAUS7 HAUS augmin-like complex subunit 7 1 GGDDYS(1)EDEGDSSVSR;GGDDYS(0.999)EDEGDS(0.001)SVSR 259.96 3.6023999999999995e-78 89573000.0 3135.5 2765.2 3339.7 3154.7 3206.1000000000004 3325.4 3522.1000000000004 3442.7 3610.1 3998.1 3633.3 True False 3453.813651766898 2998.2331084702446 3566.352125247555 3349.5586541564694 2980.9145964445515 3298.319044932855 3656.135442867072 3374.032647754098 3458.380051460922 3745.659283679986 3186.427133386335 1.0839142108661377 0.9409388581511074 1.1192322861804969 1.051195748071844 0.9355037701039856 1.0351151640576222 1.1474090854171082 1.058876448923653 1.085347289202114 1.1755044527565688 1.0 11.637723954511735 -7.529806441320473 24.995286994813505 1.0520980056170006 1.023717014702084 0.05530005835910934 0.07155085127116947 515.2022608173386 1858856.4828487847 0.009842469352734856 0.01461876202284421 2.9525248304756424e-08 7.529806441320473 -0.028380990914916637 GGDHVPVS(ph)HEQPR ddPTM_A549_MK2206_60min_R1 3 GGDHVPVSHEQPR 13 0 Q9HBR0 Q9HBR0 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 1 GGDHVPVS(1)HEQPR;GGDHVPVS(1)HEQPR;GGDHVPVS(1)HEQPR 75.46300000000001 0.0003283 153028000.0 1810.6599999999999 2136.58 1795.83 1508.25 2592.45 1681.27 1387.63 1518.5300000000002 2377.5 2461.8599999999997 2134.71 True False 2116.2551416131896 2245.322795928965 2050.50569769333 1877.7713177079152 2211.1040391977494 1859.1808754632975 1639.744409226347 1733.7862778030856 1839.0000460873453 1905.7241161639743 1604.6025920012087 1.3188655883784062 1.3993014888058175 1.2778900569617089 1.1702407356615443 1.3779761108575375 1.1586550369114057 1.0219006359582845 1.0805082120930412 1.1460781973396936 1.1876611228623384 1.0 10.648000317497589 -7.474245591065228 4.462827177287834 1.0689518329379177 1.3035369186555388 0.6671506380864352 0.07439492985095955 0.09509262236908918 4.074951512251644 0.011550578991266096 0.018381055157127776 3.355478101987672e-08 7.474245591065228 0.23458508571762104 GGDHVPVS(ph)HEQPR ddPTM_A549_PD325901_60min_R1 4 GGDHVPVSHEQPR 13 0 Q9HBR0 Q9HBR0 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 1 GGDHVPVS(1)HEQPR;GGDHVPVS(1)HEQPR;GGDHVPVS(1)HEQPR;GGDHVPVS(1)HEQPR 74.428 0.00035278 274248000.0 2608.6 2850.44 2662.0 2890.33 3277.6800000000003 2877.33 2736.9 2870.5699999999997 2996.06 3097.84 3529.1899999999996 True False 2873.423151650178 3090.656582420049 2842.659327906396 3068.8591196843013 3047.467064182145 2853.897978455721 2841.0542271891477 2813.3142294313975 2870.1460172793045 2902.241853719318 3095.122003378667 0.9283715305934692 0.9985572714246017 0.9184320762811028 0.9915147500920167 0.9846032113937668 0.9220631611097645 0.9179134858295808 0.9089509965553392 0.9273127243921964 0.9376825374092527 1.0 11.595780563310118 -10.847293027619155 1.147128647274728 0.9993625180653255 0.9440648465549693 0.0 0.03565499135685497 0.4894580382787941 1.1639972427090823 0.020885579596973194 0.005354946243381341 1.4213694356655366e-11 10.847293027619155 -0.05529767151035625 GGDS(ph)PEAK ddPTM_A549_MK2206_60min_R1 2 GGDSPEAK 8 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;H0YD62;H0YF37 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 GGDS(1)PEAK;GGDS(1)PEAK 110.53 0.0015869999999999999 41562000.0 12409.300000000001 11186.0 8993.9 7432.1 3292.0 2135.71 2504.8 2663.3 3893.7 15401.2 15271.4 True False 14503.686461743555 11755.31962073098 10269.370260260745 9252.964833639648 2807.751160886031 2361.70941463044 2959.8897373436357 3040.830931014175 3011.7831669612187 11922.058223402062 11479.089910801596 1.2634874867645973 1.0240637291001142 0.8946153693419084 0.8060712918480403 0.2445970179433818 0.20574012687261192 0.25785055787030975 0.26490174348689555 0.2623712498433513 1.0385891491435781 1.0 13.486720645847019 -6.1208001305235 1.6509707108866343 0.5297692187743718 1.1642833063192286 0.4412770784571285 0.2927158224032824 0.37313253847380423 1.8828015585690363 0.051716103719101 0.22025588470928945 7.571812821503e-07 6.1208001305235 0.6345140875448568 GGDS(ph)PEAK ddPTM_A549_PD325901_60min_R1 2 GGDSPEAK 8 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;H0YD62;H0YF37 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 GGDS(1)PEAK;GGDS(1)PEAK 101.82 0.0022660999999999996 123752000.0 12838.8 13801.099999999999 11955.2 13784.3 14169.699999999999 13378.2 9512.7 12515.5 13493.2 17278.9 17158.0 True False 14142.185524574976 14964.167131964654 12766.551764457761 14635.72490458332 13174.46915481126 13269.25237472808 9874.711004049177 12265.86853428018 12926.127727866964 16187.907305164474 15047.67477352345 0.939825304402399 0.9944504620936034 0.8484069437040632 0.9726236860418488 0.8755152774827301 0.8818141390240223 0.6562283643599103 0.8151338142861854 0.8590116361772139 1.0757746661063725 1.0 13.877252952788526 GGDSGLDGLGGPGVQLGS(ph)PDKKK ddPTM_A549_MK2206_60min_R1 1 GGDSGLDGLGGPGVQLGSPDKKK 23 2 Q9Y3Y4-2 Q9Y3Y4-2 1 GGDSGLDGLGGPGVQLGS(1)PDKKK 143.67 9.2297e-28 8968800.0 1214.0 2115.2 1745.8 1967.8 2540.6 1842.0 1946.5 1801.7 2830.7 2357.7 2408.8 True False 1418.8935205496407 2222.854645250328 1993.3806913978601 2449.911088337899 2166.8811055124684 2036.9192173793592 2300.153854095891 2057.096492474841 2189.5509696990316 1825.093932506236 1810.6284805020412 0.7836469689001123 1.2276702090944613 1.1009330256669476 1.3530722148248773 1.1967563356297408 1.1249791104658717 1.270362130533878 1.1361229068397622 1.2092767750410758 1.0079891883729697 1.0 10.82227483739806 -10.82803099799674 1.0125221753298237 0.9975174690873078 1.1678532660571972 0.14945690701688652 0.13689462778912206 0.7630898228119991 1.3552134077030158 0.09516007945175636 0.02211919945872149 1.4858295866350518e-11 10.82803099799674 0.17033579696988943 GGDSGLDGLGGPGVQLGS(ph)PDKKK ddPTM_A549_PD325901_60min_R1 1 GGDSGLDGLGGPGVQLGSPDKKK 23 2 Q9Y3Y4-2 Q9Y3Y4-2 1 GGDSGLDGLGGPGVQLGS(1)PDKKK 161.39 8.970899999999999e-34 6567700.0 1395.6 1818.4 1221.9 1778.9 1743.5 1549.4 1618.4 1566.9 1918.1 1701.8 1768.3 True False 1537.2802846135812 1971.6429496753544 1304.8254818816033 1888.7786128249732 1621.0425747484717 1536.7822001019335 1679.9890976224608 1535.6469502907294 1837.4889273724264 1594.3480575689948 1550.8103101772638 0.9912755122435728 1.271363065319051 0.8413830326756446 1.2179301365420239 1.0452874630187234 0.9909543353024738 1.0832976068042979 0.9902222987640563 1.184857306734306 1.0280741926372379 1.0 10.598806516295443 GGDSIGET(ph)PTPGASKR ddPTM_A549_MK2206_60min_R1 1 GGDSIGETPTPGASKR 16 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GGDS(0.041)IGET(0.779)PT(0.174)PGAS(0.006)KR 42.716 0.046167 7421100.0 1896.1 2355.0 2159.2 1666.9 2399.3 2039.4 2031.1 1550.0 3232.6 3184.1 3417.8 True False 2216.115324805746 2474.859440981715 2465.407027647072 2075.290574829985 2046.366148333492 2255.2079543558425 2400.124579015753 1769.7172466759187 2500.421261401454 2464.8095985465084 2569.0659335187147 0.8626152002920567 0.9633304496751588 0.9596511305843884 0.8077996550238664 0.796540922377454 0.8778318706935647 0.9342401639838136 0.6888562973749879 0.9732802995743898 0.9594185833800646 1.0 11.327028201268993 -8.965556706672833 24.999913299849833 0.9882120519871745 0.8648164707623115 0.3152542216614127 0.07599939121552989 137.1720858209781 99563.99266859303 0.013019269220166288 0.013796325858848742 1.0825383567659139e-09 8.965556706672833 -0.12339558122486305 GGDSIGETPT(ph)PGASK ddPTM_A549_MK2206_60min_R1 2 GGDSIGETPTPGASK 15 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GGDS(0.003)IGET(0.108)PT(0.888)PGAS(0.001)K;GGDSIGET(0.111)PT(0.878)PGAS(0.01)K 107.73 4.2836e-06 52168000.0 13308.9 14698.400000000001 13595.0 12077.7 17646.0 13024.2 12201.4 12154.5 19753.9 20426.0 18008.300000000003 True False 15555.116948635186 15446.485778057602 15522.97542648292 15036.73704218856 15050.296775514857 14402.412199235734 14418.23644252022 13877.437596595124 15279.673190496243 15811.752413526896 13536.342106204303 1.1491373981679724 1.1411122485577396 1.146762936744045 1.110841978151288 1.1118437061823845 1.0639811025930315 1.0651501217534762 1.025198498066511 1.1287889350471494 1.1680963948362144 1.0 13.724550315050173 -14.999999999999998 0.14280544589758995 0.6479156796312406 1.1473012590517708 0.0 0.056981304794198266 39.570813297564065 0.3774349599186882 4.044697943637218 0.0862375839017182 1.000000000000004e-15 14.999999999999998 0.4993855794205302 GGDSIGETPT(ph)PGASK ddPTM_A549_PD325901_60min_R1 2 GGDSIGETPTPGASK 15 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GGDSIGET(0.021)PT(0.977)PGAS(0.001)K;GGDS(0.001)IGET(0.058)PT(0.928)PGAS(0.014)K 87.251 4.2363999999999996e-05 66511000.0 27781.0 30906.0 27686.4 29073.0 37210.0 29437.5 28627.0 31197.0 32139.0 35103.0 35080.0 True False 30601.306668708734 33510.55708461644 29565.365595848118 30868.77318042636 34596.497967531206 29197.770759972034 29716.416150295463 30574.75136142696 30788.309596383107 32886.59058928453 30765.382390441926 0.9946668720170315 1.089229337680112 0.9609945756771537 1.0033606209951271 1.1245268311139054 0.9490462491063686 0.9659043327713569 0.9938037165735281 1.0007452274004014 1.0689478899342924 1.0 14.90902030380837 GGDVS(ph)PSPYSSSSWR ddPTM_A549_MK2206_60min_R1 2 GGDVSPSPYSSSSWR 15 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 1 GGDVS(0.986)PS(0.014)PYSSSSWR;GGDVS(0.951)PS(0.049)PYSSSSWR 194.55 2.3804999999999997e-38 45005000.0 13679.300000000001 12213.0 11797.5 10418.9 18924.8 13958.2 13237.3 13134.2 19481.6 18707.0 19669.2 True False 15988.031413224635 12834.589534059316 13470.562897677994 12971.530967722194 16140.98698953096 15435.247459296716 15642.346063613435 14996.013071800548 15069.048705722505 14481.075707424254 14784.794797696255 1.0813833828600627 0.8680938565382851 0.9111092228197145 0.8773561720141966 1.0917288478055864 1.043994703376053 1.0580022433622684 1.0142861823240998 1.0192260976168936 0.9794573347531799 1.0 13.851826599578507 -6.7537871024828915 24.99998331028816 1.0208920934747994 0.9280736470151568 0.3633202636446139 0.05961238537612299 141.62807054396393 462694.7795206918 0.007893013989261875 0.0161921414697319 1.7628400046263568e-07 6.7537871024828915 -0.09281844645964255 GGDVS(ph)PSPYSSSSWR ddPTM_A549_PD325901_60min_R1 2 GGDVSPSPYSSSSWR 15 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 1 GGDVS(0.999)PS(0.001)PYSSSSWR;GGDVS(0.899)PS(0.099)PYS(0.002)SSSWR 245.4 4.9883999999999984e-65 72085000.0 11185.3 10304.0 8626.5 9920.5 10354.2 9568.2 9364.3 8079.3 13266.2 12722.0 14040.0 True False 12320.82342181734 11172.354241891151 9211.946165358582 10533.266753909806 9626.95671205084 9490.279751526605 9720.663560841585 7918.152023411761 12708.667748453207 11918.730748849905 12313.169006892942 1.0006216445920715 0.9073500278958926 0.7481377182593459 0.8554472652826626 0.7818423272401805 0.7707422635240305 0.789452622261575 0.6430637002528886 1.0321199799449567 0.9679661460163318 1.0 13.587914491668197 -8.79470854038015 24.999819389877224 1.0151678369863468 0.8114314545659843 0.47316094561208 0.08792775228002389 103.27499332253889 77604.63684811152 0.015093883239851499 0.016069149039635622 1.6043217067506092e-09 8.79470854038015 -0.20373638242036252 GGEEPGRS(ph)YGEEDFEYHR ddPTM_A549_MK2206_60min_R1 3 GGEEPGRSYGEEDFEYHR 18 1 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035;C9JVC2 P04920-2 SLC4A2 Anion exchange protein 2 1 GGEEPGRS(0.962)Y(0.038)GEEDFEYHR;GGEEPGRS(1)YGEEDFEYHR;GGEEPGRS(0.97)Y(0.03)GEEDFEYHR 80.752 0.00011124 6792400.0 508.04 713.35 301.32 396.08 929.46 530.95 710.6700000000001 746.41 933.9200000000001 836.4799999999999 1269.26 True False 593.78473161453 749.6564680357988 344.0517069148832 493.1196177807067 792.7376652482168 587.1347765839142 839.7895399385196 852.2159032847567 722.3886111637835 647.5185870394091 954.067712206086 0.6223716870593226 0.785747655480733 0.3606156067469616 0.5168601887181243 0.830902938131271 0.615401579020304 0.8802200611072756 0.8932446747560319 0.7571670248576047 0.6786924856121115 1.0 9.897947850761572 -9.154173446216129 0.14822920408470902 1.1873052341961112 0.43513794812241785 0.17484328274565197 0.1607903124354542 3.4105305813127744 0.3459144775471862 0.9112632318449115 0.661825661790898 7.011752108741148e-10 9.154173446216129 -0.7521672860736934 GGEEPGRS(ph)YGEEDFEYHR ddPTM_A549_PD325901_60min_R1 3 GGEEPGRSYGEEDFEYHR 18 1 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035;C9JVC2 P04920-2 SLC4A2 Anion exchange protein 2 1 GGEEPGRS(0.994)Y(0.006)GEEDFEYHR;GGEEPGRS(0.819)Y(0.181)GEEDFEYHR;GGEEPGRS(0.999)Y(0.001)GEEDFEYHR 97.45700000000001 6.9775e-07 8961200.0 700.9000000000001 624.1200000000001 681.17 613.37 751.5799999999999 683.7149999999999 575.24 775.39 660.14 918.68 963.75 True False 772.0548520246912 676.7167827493305 727.3982924079642 651.2564718356591 698.7916136102418 678.1470517249854 597.1310729834065 759.9242381683121 632.3966114986881 860.6743880170902 845.2148597146066 0.9134421184755098 0.8006446822028533 0.8606075532718105 0.7705217961449009 0.8267621014687251 0.8023368779318043 0.7064843526118701 0.8990900117692043 0.748208108542036 1.0182906489690724 1.0 9.723174321278671 -10.89272505662347 1.0605680687241914 1.0036150853683126 0.8082841869337198 0.6112417751334074 0.05941633493251835 0.28779472264250444 0.5569281625332682 0.04310544769774256 0.00955950422343005 1.2801915119754454e-11 10.89272505662347 -0.19533089843459273 GGEFDEFVNDDT(ph)DDDLPISK ddPTM_A549_PD325901_60min_R1 3 GGEFDEFVNDDTDDDLPISK 20 0 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 GGEFDEFVNDDT(1)DDDLPISK;GGEFDEFVNDDT(0.99)DDDLPIS(0.01)K;GGEFDEFVNDDT(0.999)DDDLPIS(0.001)K 103.9 1.2705e-09 16689000.0 1946.18 1701.8799999999999 1967.34 2145.26 1943.6 1397.13 1813.21 1821.15 1466.1799999999998 2065.2 2359.56 True False 2143.7547608980067 1845.303400348379 2100.8555229764734 2277.767837961044 1807.0882410559977 1385.7522364969752 1882.2126987765835 1784.8257345854622 1404.5615533782927 1934.8029195507625 2069.3490784832134 1.035956080676988 0.8917313272736687 1.0152252922529406 1.1007170620196167 0.873264090551872 0.6696561014793602 0.909567514900001 0.8625058735347347 0.6787455862245364 0.9349814101779917 1.0 11.014961318606709 -6.924514579730391 7.832330497760167 0.8372109476209069 1.0018624275788355 0.36718141902453416 0.10374489894723853 0.266561916081429 24.110099732439437 0.018947653999194708 0.03591368319243483 1.1898313845770218e-07 6.924514579730391 0.16465147995792861 GGEIQPVSVK ddPTM_A549_MK2206_60min_R1 2 GGEIQPVSVK 10 0 P61604;B8ZZL8;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 ; 170.99 4.9807e-10 12641800.0 7127.299999999999 9713.4 10246.8 8293.2 12147.8 8796.0 8906.3 9856.1 13310.3 12154.3 13623.3 False True 8330.213994245021 10207.77057071414 11699.950319976848 10325.0343722959 10360.874712093348 9726.786881687754 10524.459424985476 11253.232358040328 10295.53830218145 9408.635188472048 10240.258626047602 0.8134769148364963 0.9968274184744881 1.1425444168193473 1.0082786723796857 1.0117786171668497 0.9498575413853556 1.0277532833218652 1.0989207176287599 1.005398269531322 0.9187888247802455 1.0 13.32196453178234 -5.272432683871813 5.0432691738954 1.016702986485286 0.8051671291381618 0.5014994583651368 0.05828351177229276 0.08286585386890663 6.542947662889209 0.006822883831266502 0.05966193703545377 5.34032042720506e-06 5.272432683871813 -0.2115358573471241 GGEIQPVSVK ddPTM_A549_PD325901_60min_R1 2 GGEIQPVSVK 10 0 P61604;B8ZZL8;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 ; 156.48 4.0763999999999994e-08 17682300.0 11684.9 11087.5 11837.2 12376.400000000001 15108.5 15062.4 13707.8 14173.5 15976.900000000001 12573.5 14375.3 False True 12871.14244603127 12021.882536584637 12640.54357486612 13140.862119156216 14047.331081495442 14939.736808322796 14229.457830195977 13890.79842360435 15305.446454166367 11779.60706419307 12607.22923253477 1.0209334825780303 0.9535705518513488 1.002642479304285 1.042327531036267 1.1142282592311625 1.1850134976342506 1.1286744746002406 1.1018121561363496 1.2140214294405356 0.9343533655907594 1.0 13.621963620186811 -6.530069467957377 2.570536291196718 1.1126265522411483 0.9884328383804205 0.25520808072098655 0.07562641928570492 0.26522633228242304 3.5049752916108545 0.011590328642695465 0.028541637900688588 2.9507372011409666e-07 6.530069467957377 -0.12419371386072775 GGEKT(ph)PVSGSLK ddPTM_A549_MK2206_60min_R1 1 GGEKTPVSGSLK 12 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 GGEKT(0.98)PVS(0.016)GS(0.004)LK 79.346 0.00036074 17532000.0 4468.1 4979.0 5757.1 5313.4 6745.5 5551.6 5080.9 4997.5 7680.6 8801.6 9098.5 True False 5222.206045443041 5232.409832971534 6573.543348863909 6615.183238527592 5753.245885709816 6139.066627146171 6004.033761765125 5705.910929201869 5940.956363397884 6813.312447023319 6839.091344174618 0.763581853588079 0.7650738335917069 0.9611720355896552 0.967260547581698 0.8412295722019124 0.8976436076373345 0.8778993377357394 0.8343083374755674 0.8686762706361942 0.9962306546507443 1.0 12.739588943057672 -10.612338265423032 0.6674855508707291 1.0113613160233905 0.8656273535606449 0.40329017295840097 0.06254853014324671 0.7957228172357579 0.5608330836546318 0.06556636801603076 0.013493876128611547 2.4415281424575683e-11 10.612338265423032 -0.14573396246274561 GGEKT(ph)PVSGSLK ddPTM_A549_PD325901_60min_R1 2 GGEKTPVSGSLK 12 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 GGEKT(0.466)PVS(0.425)GS(0.109)LK;GGEKT(0.997)PVS(0.003)GSLK 119.47 6.838200000000001e-06 45968000.0 7847.6 8879.6 8036.9 8348.1 8249.6 9313.0 8747.7 9637.6 9938.6 8586.3 9039.3 True False 8644.282574902223 9627.915054958912 8582.332363805755 8863.7431770893 7670.176555574988 9237.158015715313 9080.598510425114 9445.370507449057 9520.915204412488 8044.159552652878 7927.523404843829 1.090414008695382 1.2144921639810133 1.0825994356020228 1.11809738356287 0.9675375478410322 1.1652009768992015 1.1454521225224943 1.1914654836184781 1.2009949032247667 1.0147128102753733 1.0 12.952654516341852 -10.985023042504064 1.2862061838490222 1.0007287998564014 1.137025228466011 0.3362541721043415 0.06626972953780053 0.40673032450264734 1.207524998612776 0.0476678445972849 0.011194178801461105 1.0350872462605518e-11 10.985023042504064 0.13629642860960955 GGEKTPVS(ph)GSLK ddPTM_A549_MK2206_60min_R1 1 GGEKTPVSGSLK 12 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 GGEKT(0.244)PVS(0.732)GS(0.024)LK 77.222 0.00030407 17394000.0 5257.1 6307.5 5516.6 5376.4 7739.8 5945.1 5361.4 5356.2 8553.7 8435.4 9247.8 True False 6144.369956245077 6628.5248084892455 6298.936832492514 6693.618241355764 6601.2856728510615 6574.206535962011 6335.496980914317 6115.457752674551 6616.300607452086 6529.837281360263 6951.316033704243 0.8839146323449264 0.9535640123898975 0.9061502601739593 0.9629282007753638 0.9496454543059156 0.94574991326624 0.9114097172673408 0.8797553906372637 0.9518054675362484 0.9393670564968716 1.0 12.76307042157178 -9.743561334038922 1.0035161318734382 0.9922719896200511 0.9277059494757741 0.1502890632779802 0.03172766235924125 0.28714670191979935 0.5969207588422994 0.00878704065268671 0.005509384565776624 1.8048398272997148e-10 9.743561334038922 -0.06456604014427703 GGET(ph)PGSEQWK ddPTM_A549_MK2206_60min_R1 2 GGETPGSEQWK 11 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GGET(0.987)PGS(0.013)EQWK;GGET(0.826)PGS(0.174)EQWK 188.26 8.1934e-19 119732000.0 31984.0 31059.0 21445.0 20290.1 49266.0 38749.0 37500.0 35947.0 54581.0 49427.0 52988.0 True False 37382.117266276546 32639.770436284954 24486.223466048268 25261.175410857202 42019.036662275576 42849.39346049549 44313.26459213767 41042.597333070495 42218.49064794675 38261.40637145765 39829.61720559706 0.9385507541614891 0.8194849141482146 0.6147742605622466 0.6342309362518145 1.0549696334106582 1.0758173556956525 1.1125706873705665 1.0304542250861246 1.0599773136161097 0.9606270171755745 1.0 15.281553993867652 -6.773533116817554 24.999967591428394 1.0407667462786538 0.7468129869224829 0.7106461315979525 0.08908593847874868 88.36622731627261 182669.26551594585 0.012946514848883095 0.02459698869621694 1.6844839727464483e-07 6.773533116817554 -0.29395375935617096 GGET(ph)PGSEQWK ddPTM_A549_PD325901_60min_R1 1 GGETPGSEQWK 11 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GGET(0.914)PGS(0.086)EQWK 79.639 0.0010021000000000001 137260000.0 22210.0 19860.0 18783.0 18721.0 16506.0 18846.0 16499.0 14409.0 18662.0 17146.0 20914.0 True False 24464.74284986216 21533.671898676075 20057.727331354577 19877.353651524165 15346.675502608701 18692.52442437139 17126.878473599223 14121.601191358168 17877.701038853138 16063.39863384533 18341.71058476917 1.333831037012301 1.174027460478931 1.0935581628907816 1.0837240921264009 0.8367090643853291 1.019126560632438 0.9337666950116018 0.769917349098543 0.974701948121385 0.8757851978748518 1.0 14.162840573394167 -5.589278862788006 1.0003149751538674 0.961912993523998 1.4068278524208075 0.7019770934186071 0.0834590024767322 0.5363530129534586 0.5778997144773536 0.012379030974295139 0.22450112686407728 2.5746674185305703e-06 5.589278862788006 0.4449148588968096 GGFAET(ph)GDHS(ph)R ddPTM_A549_MK2206_60min_R1 1 GGFAETGDHSR 11 0 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 2 GGFAET(1)GDHS(1)R 52.265 0.032984 2914900.0 476.6 537.09 228.39 623.96 465.23 345.06 403.0 436.14 758.17 714.54 779.79 True False 557.0384282487307 564.425586903129 260.7791362746919 776.8302280106285 396.7952832864544 381.5740201677097 476.219883483506 497.9641806227324 586.4457055487039 553.1249177304178 586.1466218908528 0.9503397399984636 0.962942659436211 0.44490427230211343 1.3253172482759497 0.6769556770734784 0.6509873228251125 0.8124586335536087 0.8495556606917698 1.000510253999053 0.943663064961613 1.0 9.19511778311832 -8.731766745963519 4.755078796926881 1.0006874414814382 0.8285709947143756 0.08706611639053408 0.20997307361608028 0.2956743506517993 15.858425006397407 0.033660478736021175 0.037412407274534584 1.8545273990345185e-09 8.731766745963519 -0.17211644676706261 GGFAET(ph)GDHS(ph)R ddPTM_A549_PD325901_60min_R1 2 GGFAETGDHSR 11 0 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 2 GGFAET(1)GDHS(1)R;GGFAET(1)GDHS(1)R 64.199 0.009662100000000002 4433200.0 1248.62 1447.8 979.0 1604.85 1545.1100000000001 1493.52 1310.03 1384.02 1405.9099999999999 1538.58 1640.1599999999999 True False 1375.3789832145383 1569.8111870545417 1045.4408272052453 1703.977939621203 1436.5868039401275 1481.3572682949778 1359.8839085259224 1356.4146353573137 1346.8244918837222 1441.4337962242944 1438.4307178308788 0.956166304129391 1.09133597301216 0.7267926179870148 1.1846089759475962 0.9987181072623839 1.0298426263649536 0.9453940962666569 0.9429822504088041 0.9363151628982891 1.002087746289195 1.0 10.490280019851975 -7.774402536353602 24.89153200143863 0.9650405528953967 0.9983567997461923 0.022739689503414318 0.1062355839025469 828.2686578762248 1590417.2309026492 0.015365648376545993 0.02130120424693071 1.681115156449997e-08 7.774402536353602 0.033316246850795594 GGFDS(ph)PFYR ddPTM_A549_MK2206_60min_R1 2 GGFDSPFYR 9 0 A0A2R8YEH9;A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574 A0A2R8YEH9 TSC1 Hamartin 1 GGFDS(1)PFYR;GGFDS(1)PFYR 121.73 0.0001226 45133000.0 2743.5 2870.6 2815.0 2588.8 4004.6 3172.6 3393.9 3058.4 4705.6 4252.4 5056.5 True False 3206.5357278648626 3016.7012786760547 3214.2093288377655 3223.056116215649 3415.5286448615434 3508.3224261985624 4010.527698646827 3491.937565957178 3639.7891132991003 3291.7798865799355 3800.8314976995057 0.8436405901723486 0.7936950850101999 0.8456595170775659 0.8479871097065047 0.8986266944295818 0.9230407684008124 1.0551711384927858 0.9187299063562041 0.9576296964235647 0.8660683559827161 1.0 11.892099352266111 -7.054274039358498 1.4238992022549533 0.9790546729081894 0.824816719563716 0.5539368905113037 0.049054130080445 0.13426457307007256 0.537297833796718 0.005527156777001326 0.0122070042648461 8.82522853702326e-08 7.054274039358498 -0.15423795334447332 GGFDS(ph)PFYR ddPTM_A549_PD325901_60min_R1 2 GGFDSPFYR 9 0 A0A2R8YEH9;A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574 A0A2R8YEH9 TSC1 Hamartin 1 GGFDS(0.992)PFY(0.008)R;GGFDS(0.977)PFY(0.023)R 87.149 0.0011551999999999999 82670000.0 4105.8 4684.5 3626.3999999999996 4174.3 5267.4 4875.8 4473.3 4212.3 4706.1 3994.4 5480.4 True False 4522.617793469789 5079.279255254178 3872.5093113147095 4432.137030476861 4897.435995543505 4836.093101366338 4643.533879383685 4128.282372014577 4508.318982903592 3742.1929023114294 4806.345543117957 0.9409680916399303 1.056786119451404 0.8057076372421088 0.9221428194697917 1.0189521231064997 1.0061892258851373 0.9661256848319205 0.8589233410248092 0.9379931056681725 0.7785942289708546 1.0 12.230724656688423 -8.222617656766369 0.005377633892094552 1.911653746130755 1.4293763569307304e-07 0.0 0.0912618798749748 11316.021528562413 41.80125404854521 7392.545761165288 7464.5982814194185 5.98938655333973e-09 8.222617656766369 -1.9116536031931193 GGFDS(ph)PFYRDSLPGSQR ddPTM_A549_MK2206_60min_R1 2 GGFDSPFYRDSLPGSQR 17 1 A0A2R8YEH9;A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574 A0A2R8YEH9 TSC1 Hamartin 1 GGFDS(0.99)PFY(0.007)RDS(0.003)LPGSQR;GGFDS(1)PFYRDSLPGSQR 105.96 3.1064000000000004e-09 11720500.0 2044.42 2646.23 3138.3 2074.29 4011.2000000000003 2901.5 2505.9 2668.3 5597.299999999999 4192.5 4330.6 True False 2389.468114729899 2780.9118040378107 3583.3581302634325 2582.4911431184155 3421.1577936045105 3208.5348041401767 2961.189593105006 3046.539696326036 4329.520487051401 3245.411338182292 3255.1925015203183 0.7340481749125165 0.8543002611178916 1.100812971457094 0.7933451376262013 1.0509847856944494 0.9856666856542737 0.9096818672696009 0.9359015464993753 1.3300351622920377 0.9969952120086729 1.0 11.668527146878438 -8.66378388552675 10.176105690644663 1.1557734130645099 0.9257444747881558 0.27192383109637175 0.13123243964791087 0.2827771121058082 27.287423865529632 0.02504651924379114 0.02839632299392845 2.1687830704309907e-09 8.66378388552675 -0.23002893827635407 GGFDS(ph)PFYRDSLPGSQR ddPTM_A549_PD325901_60min_R1 2 GGFDSPFYRDSLPGSQR 17 1 A0A2R8YEH9;A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574 A0A2R8YEH9 TSC1 Hamartin 1 GGFDS(1)PFYRDSLPGSQR;GGFDS(1)PFYRDSLPGSQR 139.44 6.609999999999999e-17 26917000.0 5160.0 5508.6 5486.8 7050.3 6313.1 9653.8 7052.799999999999 8151.0 9112.2 6654.4 7539.4 True False 5683.839401408766 5972.829054433385 5859.167242808724 7485.781018606952 5869.689635012662 9575.182653507192 7321.198163440242 7988.421910664197 8729.24592252908 6234.240048352991 6612.1015961943485 0.8596116255503619 0.9033177980615267 0.8861278305495212 1.1321333935515232 0.8877192144765307 1.44812999531318 1.1072422371207997 1.2081517191541644 1.3201923466441097 0.9428530335863503 1.0 12.690893176745384 -6.504391073269053 1.2620631785668321 1.1691565583264951 0.8707888927432059 0.33756468161874076 0.15316507535976162 0.39620178401116773 1.1976451897755551 0.023855450863802693 0.08412521889513964 3.13046553476912e-07 6.504391073269053 -0.2983676655832892 GGFFS(ph)SFMK ddPTM_A549_PD325901_60min_R1 1 GGFFSSFMK 9 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 GGFFS(0.5)S(0.5)FMK 46.891000000000005 0.012620000000000001 15101000.0 5793.9 5925.8 6005.5 5703.3 7286.3 6441.5 6041.2 6507.6 6805.9 6780.0 6766.4 True False 6382.092462756256 6425.187962596909 6413.06934400521 6055.579887865913 6774.535424370402 6389.042559672519 6271.101171871482 6377.80081288656 6519.871691154787 6351.909642917959 5934.175695743623 1.0754808738362616 1.0827431292951895 1.0807009554174611 1.020458476180503 1.141613557082501 1.07665207220864 1.056777131888684 1.0747576647353287 1.0986987958295984 1.0703946038325023 1.0 12.534831926617715 -10.840228282491646 0.9735115859958454 0.9977435110511917 1.0794688972177082 0.07359245035251283 0.03415192262087133 0.358261737877558 0.5748889401406135 0.021209692435580723 0.00465357015730272 1.444680189634479e-11 10.840228282491646 0.08172538616651648 GGFFSS(ph)FMK ddPTM_A549_PD325901_60min_R1 1 GGFFSSFMK 9 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 GGFFS(0.42)S(0.58)FMK 46.39 0.013191999999999999 14763000.0 5144.1 4926.0 5234.3 5913.1 6031.6 6112.2 5586.5 5807.4 5608.0 5840.6 5824.3 True False 5666.3252451137305 5341.131307798504 5589.5310744028775 6278.338757375545 5607.961223890385 6062.424269693453 5799.0973145501 5691.5668511828335 5372.315262345325 5471.82351923697 5107.948023279673 1.109315368772202 1.0456510683852085 1.0942811181571095 1.2291312927934603 1.0978892499163817 1.1868609942904111 1.1353085990931167 1.1142570020766254 1.0517560550461336 1.071237117977497 1.0 12.318528129409424 -8.963664809775516 1.4055444688852403 1.0166818848601564 1.1293736044849318 0.3599651705050928 0.04930864418657144 0.22233829914122705 0.8852116240439362 0.010112286459287781 0.009983482088213138 1.0872644549395707e-09 8.963664809775516 0.11269171962477542 GGGDRYEDRYDR ddPTM_A549_MK2206_60min_R1 4 GGGDRYEDRYDR 12 2 E7EX17;P23588;P23588-2;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;; 162.32 1.3894999999999999e-14 72054200.0 3826.5699999999997 3890.21 3926.86 3709.87 5343.01 3354.21 3564.638 3281.4610000000002 5519.139999999999 4442.96 5289.5599999999995 False True 4472.401465345669 4088.2050725696313 4483.747795751285 4618.78831654239 4557.060306842547 3709.1502758556003 4212.286583178358 3746.618145802843 4269.063602255526 3439.2922502302677 3976.0162675707297 1.1248448608783537 1.0282163848055499 1.127698554033022 1.1616623287520857 1.146137238927049 0.9328810614051689 1.059423880514449 0.9423045313876333 1.0737037564647196 0.865009602269965 1.0 11.957107944252328 -7.234209427155358 24.977153733341197 1.0235880019984898 1.1157364132995025 0.42327711894724496 0.07087330198144756 575.9218987642251 528274.9864555527 0.007994541135595567 0.013845013000663316 5.831638209578465e-08 7.234209427155358 0.0921484113010127 GGGDRYEDRYDR ddPTM_A549_PD325901_60min_R1 3 GGGDRYEDRYDR 12 2 E7EX17;P23588;P23588-2;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;; 128.21 2.9472e-08 50013400.0 4269.16 4983.620000000001 4218.92 5009.94 5354.87 5737.73 5531.57 6362.0 5031.66 5600.77 5520.74 False True 4702.561980410514 5403.6071474159135 4505.241281626921 5319.392615400724 4978.762404498622 5691.003829218322 5742.07692334125 6235.104919107552 4820.196828268987 5247.136426366613 4841.7239788542865 0.9712577587959272 1.1160502273602526 0.9305035357866499 1.0986567261232991 1.0283036427195842 1.1754085639894332 1.1859570988390002 1.2877861163376325 0.995553825315256 1.0837330771607225 1.0 12.241305119949214 GGGDVLEPVSSDS(ph)LSTKDFAAVEEVAPAKPPR ddPTM_A549_MK2206_60min_R1 1 GGGDVLEPVSSDSLSTKDFAAVEEVAPAKPPR 32 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 GGGDVLEPVS(0.021)S(0.021)DS(0.464)LS(0.464)T(0.03)KDFAAVEEVAPAKPPR 70.616 6.6319e-05 4964000.0 755.28 1043.4 875.16 553.66 825.56 938.99 798.64 663.5 1087.2 1012.8 1331.0 True False 882.7527991768804 1096.5046032782682 999.2708476822951 689.3067248547414 704.1212176127194 1038.3532985488828 943.7425502363948 757.5531568835299 840.9509359016456 784.0077765798508 1000.4759662687711 0.8823328385079215 1.0959829523617959 0.9987954547364386 0.688978794188809 0.7037862391024814 1.0378593125243911 0.943293574313473 0.7571927586714445 0.8405508620441261 0.783634792851418 1.0 9.966470795472636 -6.053664932256065 24.997877667957443 0.890571611979375 1.0037173933439023 0.15385161051233887 0.12319640810186269 476.4494382790906 221936.2655170953 0.017960477573211165 0.04751941741005555 8.837614788752944e-07 6.053664932256065 0.11314578136452735 GGGESLQEAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GGGESLQEASPR 12 0 P98175-5 P98175-5 RBM10 RNA-binding protein 10 1 GGGESLQEAS(1)PR;GGGESLQEAS(1)PR 164.64 2.349e-14 38034000.0 2737.0 4265.0 3573.7 3635.1000000000004 4341.6 3480.3 3019.8999999999996 3580.9 5313.5 5469.6 5838.799999999999 True False 3198.938686774604 4482.070282712108 4080.5043973241663 4525.699663185838 3702.9563912827425 3848.5830359638303 3568.5767397812383 4088.503541046321 4110.000733915923 4234.013561197822 4388.864817317882 0.7288761034862623 1.0212368047943627 0.929740278448093 1.0311777308173231 0.8437162103219413 0.8768971467924529 0.813097893947452 0.9315628781532813 0.9364609995957046 0.9647172418004225 1.0 12.099632118680873 -9.635511838873109 0.8761704920520974 0.990039935982873 0.9029189875666283 0.12979259749630934 0.0829504947431934 0.6825704769764617 1.1041703414409256 0.026524258889620882 0.016680057314175673 2.314665087355445e-10 9.635511838873109 -0.08712094841624474 GGGESLQEAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 GGGESLQEASPR 12 0 P98175-5 P98175-5 RBM10 RNA-binding protein 10 1 GGGESLQEAS(1)PR;GGGESLQEAS(1)PR 140.53 2.1072999999999998e-10 52578000.0 4452.700000000001 4504.9 3708.8 4163.4 4630.5 5172.2 4541.5 4985.9 4580.5 4575.5 5482.4 True False 4904.734826095512 4884.543732947923 3960.501470826165 4420.563762232554 4305.269654357788 5130.079318037447 4714.329267704157 4886.452313137118 4387.997514117823 4286.602149140283 4808.099555797001 1.020098433731889 1.0158990420776033 0.8237145310460744 0.9193993824239339 0.8954202392017935 1.0669661180064882 0.9804974320925225 1.0162959931321824 0.9126261765581223 0.8915377269948659 1.0 12.231251053250212 GGGGEGGGEAS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 GGGGEGGGEASPDR 14 0 A0A0D9SGD0;A0A0D9SGA5 A0A0D9SGD0 SLC12A5 1 GGGGEGGGEAS(1)PDR;GGGGEGGGEAS(1)PDR 54.523999999999994 0.017781 5567300.0 724.9 701.49 764.44 720.72 425.68 299.24 115.47 173.826 269.92 957.08 1066.1599999999999 True False 847.2453978965688 737.1928446939545 872.8490867981321 897.2964323543504 363.0630358948864 330.90537818056407 136.44940433211028 198.4663678197988 208.78355097366835 740.8749632790723 801.4030474809264 1.0572026155375125 0.9198777656401411 1.089151194947142 1.1196568757441696 0.4530342591485184 0.41290756158303693 0.17026314631696957 0.24764863128939169 0.26052253186451413 0.9244723558362876 1.0 9.6463841856643 -6.760498464527844 24.99981014214585 0.5456112516071151 1.0404782208327799 0.5151164241872014 0.2541638373496671 22.904835361121354 608541.1709356915 0.04798777383350307 0.09554330908533622 1.7358073999036493e-07 6.760498464527844 0.49486696922566475 GGGGEGGGEAS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 GGGGEGGGEASPDR 14 0 A0A0D9SGD0;A0A0D9SGA5 A0A0D9SGD0 SLC12A5 1 GGGGEGGGEAS(1)PDR;GGGGEGGGEAS(1)PDR 116.19 3.7149e-06 14393900.0 1856.1399999999999 1979.98 1716.07 2006.93 2538.3 1967.44 2102.6000000000004 1552.08 1806.77 2166.75 2136.8 True False 2044.5739663819513 2146.839863340415 1832.5328297672165 2130.893508031268 2360.01856465962 1951.4178209426527 2182.615593586869 1521.1225468167945 1730.8377401119226 2029.9410352201305 1873.9871462912279 1.09102881011128 1.1456001006139154 0.9778790817183284 1.1370907811446191 1.2593568580928038 1.041318679695678 1.164690802659155 0.811703831494906 0.9236123863161978 1.0832203621233731 1.0 10.871895342224022 -8.239779713542688 24.997501317474253 0.9515033551095219 1.115851575218872 0.42733276278734345 0.09022495809883374 525.5279424559257 606514.5637136494 0.013170095770802104 0.016994958383227492 5.757318908029592e-09 8.239779713542688 0.16434822010935013 GGGGEGGGEAS(ph)PDRQGSLPSR ddPTM_A549_MK2206_60min_R1 4 GGGGEGGGEASPDRQGSLPSR 21 1 A0A0D9SGD0;A0A0D9SGA5 A0A0D9SGD0 SLC12A5 1 GGGGEGGGEAS(0.999)PDRQGS(0.001)LPSR;GGGGEGGGEAS(0.957)PDRQGS(0.036)LPS(0.006)R;GGGGEGGGEAS(1)PDRQGSLPSR;GGGGEGGGEAS(0.93)PDRQGS(0.06)LPS(0.01)R 91.72200000000001 6.4875e-07 54769100.0 1717.41 2248.2200000000003 1998.2800000000002 1758.6200000000001 2235.5299999999997 2049.17 2261.91 1977.6299999999999 2667.11 4037.28 3072.2400000000002 True False 2007.2668213568036 2362.6447950759716 2281.666151911167 2189.4819789474514 1906.686498388684 2266.011809271043 2672.869768362722 2257.965108737867 2063.0138434994838 3125.255643987265 2309.318018489536 0.8692032908787954 1.0230920021233434 0.9880259598907668 0.9481076064090704 0.825649167036681 0.9812471868873139 1.1574281874399333 0.9777627380289279 0.8933433277625603 1.353324063193086 1.0 11.173251146429445 -6.365770267678841 15.960716453887537 0.958802400367928 0.9666993270061369 0.0 0.14551790382321253 30.514096905907035 4594.00542077525 0.012590343754167604 0.029257791836466034 4.307544099361244e-07 6.365770267678841 0.007896926638208956 GGGGEGGGEAS(ph)PDRQGSLPSR ddPTM_A549_PD325901_60min_R1 3 GGGGEGGGEASPDRQGSLPSR 21 1 A0A0D9SGD0;A0A0D9SGA5 A0A0D9SGD0 SLC12A5 1 GGGGEGGGEAS(1)PDRQGSLPSR;GGGGEGGGEAS(0.933)PDRQGS(0.065)LPS(0.002)R;GGGGEGGGEAS(0.942)PDRQGS(0.054)LPS(0.004)R 143.9 3.8114e-22 59619700.0 2219.5 2695.86 2333.58 2277.3 3264.3599999999997 2749.84 2564.85 2580.33 2725.73 3454.6400000000003 2955.7 True False 2444.8220060904587 2923.0495833214923 2491.950771756501 2417.9636488764486 3035.0826150306407 2727.4462147465447 2662.456770289773 2528.8632939202753 2611.1770470814063 3236.5134408274484 2592.16763772603 0.9431573677986236 1.1276468160391537 0.9613385860887285 0.9327960173893687 1.1708666410530286 1.0521874338108732 1.0271159671700105 0.9755786073074779 1.0073334027779361 1.2485741252701805 1.0 11.339943306239375 -8.025353694508658 20.560902577097036 1.001462638165161 1.0348304172313718 0.0 0.10153758616553678 206.020886924074 167075.71663933404 0.010519527626109726 0.013632061588203601 9.432923350567934e-09 8.025353694508658 0.0333677790662108 GGGGGGQGAEGPPGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 GGGGGGQGAEGPPGTPR 17 0 Q8TER5;Q8TER5-4;Q8TER5-3;G3V485;G3V3N2;G3V5C1 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GGGGGGQGAEGPPGT(1)PR;GGGGGGQGAEGPPGT(1)PR 157.7 3.7931e-22 27787000.0 4292.25 3959.03 4129.25 4045.13 6082.8 4599.2 4889.1 4986.4 6431.2 7107.200000000001 6874.900000000001 True False 5016.676864562767 4160.527716615641 4714.839741066908 5036.187031592789 5188.028177836437 5085.884291298121 5777.386184464536 5693.237470209544 4974.543468516064 5501.678583835225 5167.672592412604 0.9707807092748997 0.8051066785315123 0.9123719927592617 0.974556135577771 1.0039390238177472 0.984173087661442 1.1179861109906883 1.1017024334259482 0.9626274458292695 1.064633737035319 1.0 12.335298952939734 -6.283390646103802 2.805612784477657 1.002605965758393 0.8828248609017555 0.4358425021561608 0.06256357251964285 0.21424328701165332 3.3424820679894616 0.008994954279621563 0.025235156556521917 5.207261093860713e-07 6.283390646103802 -0.11978110485663751 GGGGGGQGAEGPPGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GGGGGGQGAEGPPGTPR 17 0 Q8TER5;Q8TER5-4;Q8TER5-3;G3V485;G3V3N2;G3V5C1 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GGGGGGQGAEGPPGT(1)PR;GGGGGGQGAEGPPGT(1)PR 155.08 4.816499999999999e-22 36015000.0 4269.8 4377.700000000001 4734.0 4270.6 4999.4 4616.0 4843.8 4831.200000000001 5326.1 5012.799999999999 5128.9 True False 4703.266952739371 4746.624142539489 5055.277707854576 4534.3852627636925 4648.259390993696 4578.408826429921 5028.133459629064 4734.837925996919 5102.262539011669 4696.290952510201 4498.077814775874 1.045617071649909 1.0552561200580297 1.1238751119974713 1.008071769649816 1.0333879453406711 1.0178589644203497 1.117840479129106 1.0526358415684371 1.1343206474221257 1.0440661869128212 1.0 12.135092903985955 -11.176920158353767 1.5981331421399567 1.0001357223767342 1.074509805056118 0.0745382624686528 0.04321805126805969 0.4267950446622351 1.9637983540071247 0.03287316962802461 0.006989175520800413 6.653954727151347e-12 11.176920158353767 0.07437408267938372 GGGGGQDNGLEGLGNDS(ph)R ddPTM_A549_MK2206_60min_R1 2 GGGGGQDNGLEGLGNDSR 18 0 P08621-4;P08621;P08621-2 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R 195.48 1.7864e-48 16969200.0 2979.9 3457.5 2749.3999999999996 3343.8 5528.8 4056.3999999999996 3834.8 3490.3 6990.1 4813.0 4945.200000000001 True False 3482.834268439764 3633.471981823473 3139.3062624179584 4163.031150108888 4715.520843957076 4485.645555579601 4531.533521544788 3985.060713595454 5406.853510895968 3725.739957226329 3717.1703594232363 0.9369584742358076 0.9774833086711823 0.8445419388593908 1.119946289132369 1.268578081712872 1.2067366092619987 1.2190814741802443 1.0720683552996437 1.4545616660235356 1.002305408946719 1.0 11.859989093675038 -6.442497020964947 4.477389036393186 1.2108570962456877 0.9275792140506682 0.4138254678282932 0.12796278189241111 0.1842202886860639 6.689448621118478 0.023030143396198105 0.05458900799816242 3.6099648982674146e-07 6.442497020964947 -0.2832778821950195 GGGGGQDNGLEGLGNDS(ph)R ddPTM_A549_PD325901_60min_R1 2 GGGGGQDNGLEGLGNDSR 18 0 P08621-4;P08621;P08621-2 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R 170.06 3.0124e-30 16953700.0 2573.0 2784.8999999999996 2659.1000000000004 2660.3 3094.2 2465.17 2717.3 2389.15 2791.8 3363.8999999999996 2961.2 True False 2834.209065857513 3019.5932966073983 2839.5625164672797 2824.6206890203357 2876.874066410508 2445.0944728445074 2820.708338463616 2341.4965289980823 2674.470354746019 3151.5027799132336 2596.991172593403 1.091343357562213 1.1627275935605037 1.0934047625705405 1.0876512476550384 1.1077719850459133 0.9415105059455366 1.0861447540642986 0.9016189788045452 1.0298342108245382 1.2135207902020264 1.0 11.342625394836526 -7.231450212289063 22.366114761730728 1.0065125538842745 1.1095823265950921 0.17277855065644043 0.07914944592265595 110.81980681431817 82649.7414771492 0.006578983121229028 0.011393232504092738 5.86880646018485e-08 7.231450212289063 0.10306977271081763 GGGGNFGPGPGS(ph)NFR ddPTM_A549_MK2206_60min_R1 2 GGGGNFGPGPGSNFR 15 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGGGNFGPGPGS(1)NFR;GGGGNFGPGPGS(1)NFR 115.68 1.0008e-06 13625100.0 7186.1 8138.700000000001 7924.7 6936.799999999999 10212.099999999999 8545.0 7624.6 7106.0 12311.9 11723.400000000001 12490.0 True False 8398.93799672305 8552.925066801647 9048.541622820829 8636.31631140478 8709.913617887072 9449.226228288066 9009.891125579006 8113.2972612123085 9523.274308064269 9075.075797745094 9388.388293536402 0.894609142072388 0.9110110062970079 0.9638013831458647 0.9198933875956751 0.9277325719350107 1.0064801255390714 0.9596845426367827 0.8641842462777182 1.0143673237951536 0.966627658976673 1.0 13.196661796056064 -7.9630958870326385 0.3575190569035595 1.0135078889486413 0.9078741154895191 0.14777842345400605 0.042856048860450524 1.0553748108293588 0.32306406192191645 0.021701316790219083 0.04012360377134059 1.088689697118683e-08 7.9630958870326385 -0.10563377345912217 GGGGNFGPGPGS(ph)NFR ddPTM_A549_PD325901_60min_R1 1 GGGGNFGPGPGSNFR 15 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGGGNFGPGPGS(1)NFR 109.07 3.3951999999999997e-06 6334300.0 4006.9 4851.9 4946.4 6053.2 5328.0 5543.6 4668.7 5475.1 5352.2 5022.1 6022.6 True False 4413.677538276125 5260.786640744532 5282.092449119536 6427.092416185358 4953.779660602154 5498.454759574724 4846.369933310666 5365.894835367144 5127.265646776866 4705.00374892305 5281.858380406944 0.8356296629702652 0.996010544368138 1.0000443155979835 1.216824070866167 0.9378857409312983 1.04100760822578 0.9175501469877113 1.0159103953396276 0.970731374736676 0.890785668615475 1.0 12.366829904489007 GGGGNFGPGPGSNFR ddPTM_A549_MK2206_60min_R1 2 GGGGNFGPGPGSNFR 15 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 147.62 2.6787e-13 14837800.0 5074.700000000001 6769.1 6004.7 6032.0 6921.7 5927.700000000001 5469.799999999999 5520.8 8550.2 8415.0 8245.7 False True 5931.185295496922 7113.618276836236 6856.256751997204 7509.840270786766 5903.527099120548 6554.965279511198 6463.591857761988 6303.390306740911 6613.593351863737 6514.04565552868 6198.065120257257 0.9569414293683223 1.1477159627746825 1.106193081061502 1.2116426860766933 0.9524790373411752 1.057582512014512 1.0428402626227504 1.0169932365085061 1.067041604685372 1.050980512327742 1.0 12.597602197407879 -6.773264823223186 24.999723327117632 1.0294971245346922 1.1086706293506634 0.25898396357281117 0.06392600241804995 220.18213853939417 465479.0370154332 0.008764735885031738 0.01665697804910919 1.6855249159390514e-07 6.773264823223186 0.07917350481597119 GGGGNFGPGPGSNFR ddPTM_A549_PD325901_60min_R1 2 GGGGNFGPGPGSNFR 15 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 186.58 5.8676e-33 26654000.0 15520.699999999999 16928.5 16462.3 17123.5 20284.8 19437.8 18332.0 18202.0 19888.7 19682.3 20507.6 False True 17096.35003826455 18355.124105575916 17579.53067385179 18181.179704709895 18860.065626761014 19279.50500138204 19029.634291655308 17838.94683080723 19052.8471038173 18439.55621899767 17985.2952083873 0.9505737793112122 1.0205628483104436 0.9774390951144197 1.0108913695356665 1.0486380906311603 1.071959329997052 1.0580662742072195 0.9918628871039147 1.05935692926142 1.025257356376254 1.0 14.134530219433143 -6.505594363557037 4.6284367257740655 1.032713343632812 0.98721307403604 0.4114546195882459 0.027804653438167376 0.19346897214172348 10.568770813283853 0.0044622004673126135 0.010183590700695959 3.121804026573986e-07 6.505594363557037 -0.045500269596772 GGGHVAQIYAIR ddPTM_A549_PD325901_60min_R1 2 GGGHVAQIYAIR 12 0 P62249;M0R210;M0R1M5;M0R3H0;M0QX76 P62249 RPS16 40S ribosomal protein S16 0 ; 109.79 9.964799999999999e-05 12643100.0 2837.9 2151.53 2617.8 2507.5 2921.2 3345.8999999999996 2640.2 2543.3 3451.4 3018.5 3217.8 False True 3126.001518848439 2332.846983895192 2795.459650110205 2662.382580054316 2716.0249895929105 3318.6520997296097 2740.6742557728753 2492.571886319748 3306.349660566809 2827.9113948595664 2822.030999314822 1.1077133878428054 0.8266553359837642 0.9905843170358268 0.9434278293543663 0.9624362702792246 1.1759800301752055 0.971170854054509 0.8832546087994549 1.1716206028103793 1.0020837459071754 1.0 11.462518120333668 -7.0548094272613 24.788285937268178 1.0634646090892632 0.9580152525683652 0.05813894368917305 0.1018399294921987 361.39143715017883 163443.40548203292 0.015664813820992912 0.027132362347342648 8.8143557085474e-08 7.0548094272613 -0.10544935652089804 GGGPGKS(ph)PTQGST ddPTM_A549_MK2206_60min_R1 1 GGGPGKSPTQGST 13 1 Q6P582 Q6P582 MZT2A Mitotic-spindle organizing protein 2A 1 GGGPGKS(0.5)PT(0.5)QGST(0.001) 87.49799999999999 0.00016105 36849000.0 1656.9 1501.7 2043.3 1760.7 2346.5 1726.1 1906.4 1576.0 2507.6 2144.3 2670.6 True False 1936.5442126842672 1578.1301157206976 2333.0706648718337 2192.0715790408253 2001.332958389754 1908.7547563075511 2252.7682031586996 1799.402826297578 1939.6326038143552 1659.9011407189716 2007.4163151896182 0.964694865749033 0.7861498901744401 1.1622256166885117 1.0919865313706811 0.9969695589530517 0.9508514710498666 1.1222227228664852 0.8963775040991477 0.9662333563484761 0.8268843528663755 1.0 10.971124130846809 -5.739347878319825 24.99997656018491 1.0018751736733278 0.8754224731146878 0.1914323551575512 0.09995816957204322 242.61885541982386 274556.79618555424 0.011073776163882032 0.04281769761996546 1.822435311396416e-06 5.739347878319825 -0.12645270055864 GGGPGKS(ph)PTQGST ddPTM_A549_PD325901_60min_R1 3 GGGPGKSPTQGST 13 1 Q6P582 Q6P582 MZT2A Mitotic-spindle organizing protein 2A 1 GGGPGKS(0.821)PT(0.177)QGS(0.001)T(0.001);GGGPGKS(0.963)PT(0.035)QGST(0.002);GGGPGKS(0.983)PT(0.016)QGST(0.001) 118.51 1.1287e-05 69002300.0 7992.1 7347.389999999999 7059.009999999999 8036.799999999999 8203.98 8430.380000000001 7464.51 7810.26 7841.7300000000005 7478.03 8141.54 True False 8803.452108526937 7966.5803409674445 7538.076867875485 8533.214883102899 7627.760746994536 8361.725780363578 7748.5760127866 7654.478237269557 7512.169358450642 7005.8659095914145 7140.182193474298 1.2329450243682534 1.115739084115868 1.0557261234545021 1.195097639231356 1.0682865703295157 1.1710801704759997 1.0852070441379404 1.072028420264303 1.0520977133211415 0.9811886755486938 1.0 12.801745172119306 -2.000000513233264 0.05643358143647323 0.8044996811469494 1.7026366088207419 0.5949008009339051 0.047761698563564985 153.23091164174988 0.6306930925962421 2.116185213296204 11.453016556481197 0.009999988182374357 2.000000513233264 0.8981369276737925 GGGPGKS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 GGGPGKSPTR 10 1 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67 H7BZ50 MZT2B Mitotic-spindle organizing protein 2B 1 GGGPGKS(0.91)PT(0.09)R 46.378 0.010032 332110000.0 6108.0 5234.1 4234.2 3331.3 4357.0 3225.3 3564.0 3481.9 4550.9 7974.1 8221.5 True False 7138.881073737404 5500.493333351335 4834.673229188229 4147.468649547739 3716.091071682999 3566.599105219133 4211.532666836764 3975.4699878715332 3520.1284162939637 6172.745271747029 6179.874648143279 1.155182180901073 0.8900655185625713 0.7823254522874163 0.6711250447116806 0.601321431786563 0.5771313025403686 0.6814916008210788 0.6432929815276995 0.5696116210628275 0.9988463558239984 1.0 12.593361859630546 -5.327802484623028 1.8214912684756062 0.7373444899981111 1.2549487442567617 0.4420721852748416 0.14363519947847075 0.6754902253154385 2.4969010342362723 0.025190581790970428 0.5684945824071294 4.7010786315235145e-06 5.327802484623028 0.5176042542586506 GGGPGKS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 GGGPGKSPTR 10 1 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67 H7BZ50 MZT2B Mitotic-spindle organizing protein 2B 1 GGGPGKS(0.962)PT(0.038)R;GGGPGKS(0.779)PT(0.221)R 60.161 0.002271 1076960000.0 15657.400000000001 12563.2 9574.099999999999 9220.6 11357.7 9835.3 7894.9 8925.900000000001 11497.400000000001 12538.8 16547.8 True False 17246.927721631342 13621.944954554241 10223.855999740277 9790.13552049803 10559.974333937895 9755.204577683317 8195.344739755046 8747.86592226691 11014.204261285517 11747.098028115004 14512.525505146936 1.188416703592675 0.9386336616409842 0.7044849634279257 0.6745990225495839 0.7276455314543806 0.6721920712024648 0.5647083780730328 0.6027803995358656 0.7589446962473401 0.8094454699803174 1.0 13.825010982117753 -5.389741872201836 3.0513225731813627 0.795945638392258 1.2030400037852993 0.48895313584049693 0.12756509289641063 0.2773707127490676 4.111896647951769 0.023896224162162086 0.227044483608273 4.076224808139974e-06 5.389741872201836 0.40709436539304134 GGGPGKSPT(ph)QGST ddPTM_A549_MK2206_60min_R1 1 GGGPGKSPTQGST 13 1 Q6P582 Q6P582 MZT2A Mitotic-spindle organizing protein 2A 1 GGGPGKS(0.282)PT(0.462)QGS(0.091)T(0.165) 71.176 0.009170000000000001 37730000.0 1134.1 1701.5 1266.2 1136.8 1342.3 1196.5 1325.5 1330.2 1786.4 1677.7 2146.3 True False 1325.5083539170914 1788.0990823058983 1445.7661997067075 1415.3160510328917 1144.8494481340579 1323.1128358275803 1566.3261924500925 1518.7599235666496 1381.7832522946098 1298.706404786746 1613.3144751334812 0.8216056908603777 1.1083388327982093 0.8961465492256795 0.8772722695095092 0.7096257213209075 0.8201208482420078 0.9708746909498218 0.9413911218028287 0.8564872339475444 0.8049927182853142 1.0 10.655811967727733 -10.904149882045468 0.9834732457541914 1.0047056998797856 0.8891720761545627 0.0 0.11148655760894526 0.9796618734516342 1.5644806103650861 0.08451460968844655 0.017031315272664535 1.2469530963063323e-11 10.904149882045468 -0.11553362372522291 GGGPGKSPT(ph)QGST ddPTM_A549_PD325901_60min_R1 1 GGGPGKSPTQGST 13 1 Q6P582 Q6P582 MZT2A Mitotic-spindle organizing protein 2A 1 GGGPGKS(0.121)PT(0.723)QGS(0.078)T(0.078) 104.3 0.00043935 57344000.0 6260.7 6468.4 6651.0 6879.6 7649.3 6134.0 7651.2 7205.1 6647.5 7182.8 7367.2 True False 6896.281655116259 7013.514768851774 7102.3768557120375 7304.537267294782 7112.039556652414 6084.046737721218 7942.370602897295 7061.388628208399 6368.128692303947 6729.276782175682 6461.081104528614 1.0673572338045114 1.085501738081566 1.0992551773934451 1.13054412243409 1.1007507012514577 0.9416453128032816 1.2292634118662333 1.0929113122042418 0.9856134893339266 1.0415094120176092 1.0 12.657559869650264 -8.758292513793863 24.556825180030295 0.9932063653960785 1.094288261894267 0.24248290616977275 0.06476562777246016 50.393173387519035 393246.0755396329 0.010205898891152433 0.01133325970962294 1.7446466714417812e-09 8.758292513793863 0.10108189649818855 GGGPQAQSHGEARLS(ph)DPPGR ddPTM_A549_MK2206_60min_R1 2 GGGPQAQSHGEARLSDPPGR 20 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 GGGPQAQS(0.005)HGEARLS(0.995)DPPGR;GGGPQAQS(0.033)HGEARLS(0.967)DPPGR 40.986000000000004 0.0247 13852800.0 2043.6100000000001 2569.6 1945.99 2608.45 2837.51 1987.62 1617.48 1995.61 2914.68 3377.7000000000003 3061.3199999999997 True False 2388.5214065324976 2700.3816643510045 2221.96064363233 3247.520367097771 2420.1160378267678 2197.948629124626 1911.355178999754 2278.4938287993086 2254.509633787535 2614.6752240854685 2301.1097558662027 1.037986736809688 1.1735127615998935 0.9656039386943199 1.411284428662688 1.0517169081818818 0.9551689672869412 0.8306232130506377 0.9901717303969358 0.9797488485893078 1.1362670630637655 1.0 11.168114081986607 -6.9958747906394265 24.998431914395393 0.9758210281226161 1.1479550901608568 0.2852164749046291 0.12187861048181649 100.08424550622868 606493.1496963266 0.015075378677883155 0.028406324768633178 1.0095439008876082e-07 6.9958747906394265 0.17213406203824078 GGGPVTLQDYRLPDS(ph)DDDEDEETAIQR ddPTM_A549_PD325901_60min_R1 1 GGGPVTLQDYRLPDSDDDEDEETAIQR 27 1 Q96K21-3 Q96K21-3 ZFYVE19 Abscission/NoCut checkpoint regulator 1 GGGPVT(0.001)LQDYRLPDS(0.999)DDDEDEETAIQR 97.95700000000001 5.3696e-10 49439000.0 2141.5 1832.5 1947.0 2646.1 2435.9 2314.5 2571.6 2572.5 2639.6 2468.4 2606.1 True False 2358.903503511023 1986.9312061593098 2079.135128262117 2809.5435872708786 2264.8107873987983 2295.651479370028 2669.463645233514 2521.1894694127905 2528.666791456262 2312.5448027402213 2285.566221429039 1.0320871394555917 0.869338716826586 0.9096805460146099 1.2292549482614532 0.9909189093557466 1.0044125861882414 1.1679660034371897 1.103091849089557 1.1063633894078229 1.011803893957758 1.0 11.15833590449803 GGGQIIPTAR ddPTM_A549_PD325901_60min_R1 2 GGGQIIPTAR 10 0 P13639;Q15029-3;Q15029;K7EJ74;K7EP67;Q15029-2 P13639;Q15029-3 EEF2;EFTUD2 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component 0 ; 93.178 0.0016745999999999998 23305000.0 10038.5 11678.7 11793.7 12045.0 13986.5 13262.2 11356.8 12395.400000000001 13719.6 13434.9 13737.6 False True 11057.601130046882 12662.905035401218 12594.09140327937 12788.992293820234 13004.136490805566 13154.197040268398 11788.98923867941 12148.164022996822 13143.012923194172 12586.618121185626 12047.962289821404 0.9177984512276223 1.051041224298929 1.0453295835694438 1.061506666951048 1.0793639769101846 1.0918192407841105 0.9785048255537134 1.0083169029554544 1.0908909413086318 1.0447092892894676 1.0 13.556501539036736 -5.259603379645895 24.405656080205155 1.044508210541226 0.9177983922534304 0.5203949010131225 0.035141528944920224 84.53478823119895 1123576.126285549 0.005659817572584838 0.05043680628230899 5.5004297245932845e-06 5.259603379645895 -0.1267098182877956 GGGQSVQFTDIETLKQES(ph)PNGR ddPTM_A549_MK2206_60min_R1 1 GGGQSVQFTDIETLKQESPNGR 22 1 H7BYN4 H7BYN4 KIF23 Kinesin-like protein 1 GGGQSVQFT(0.006)DIET(0.193)LKQES(0.802)PNGR 45.07 0.0090748 8357300.0 1532.0 1565.0 1463.9 1825.6 2249.1 2016.0 1887.6 1523.7 2453.1 2428.4 2478.2 True False 1790.5641461960877 1644.6518153445359 1671.5030324993268 2272.872081954298 1918.2603693647532 2229.331781887505 2230.55248650984 1739.689141135547 1897.4767667957385 1879.8227534029536 1862.7945451594803 0.9612247098580543 0.8828949062676859 0.8973093875772669 1.2201410444648417 1.02977559943441 1.196767398573547 1.1974227068175545 0.933913590017844 1.0186183826479311 1.0091412165059863 1.0 10.863252847280352 GGGQSVQFTDIETLKQES(ph)PNGR ddPTM_A549_PD325901_60min_R1 2 GGGQSVQFTDIETLKQESPNGR 22 1 H7BYN4 H7BYN4 KIF23 Kinesin-like protein 1 GGGQSVQFTDIET(0.003)LKQES(0.997)PNGR;GGGQSVQFTDIETLKQES(1)PNGR 88.708 5.8433e-07 12348700.0 4886.9 4676.4 4405.8 5801.7 6167.6 5685.7 5633.3 5862.2 5727.8 6167.6 6276.4 True False 5383.014490454363 5070.496639827227 4704.804082227652 6160.0578323833015 5734.4090530649155 5639.397544287826 5847.67831416004 5745.273822193068 5487.0804849610495 5778.176683430801 5504.442589377699 0.9779399826682426 0.9211644153782461 0.8547285226131408 1.119106563900001 1.0417783381247356 1.0245174607090206 1.0623561276567235 1.0437521563545993 0.9968458015258158 1.0497296664663822 1.0 12.426380760485026 -6.247495021408106 24.999663503793183 1.0176814383738968 0.9182663240679385 0.5570370521379191 0.04569683849384401 542.8823027146441 973286.2750351556 0.006536662251578929 0.01719572854177055 5.655942408159336e-07 6.247495021408106 -0.09941511430595829 GGGQSVQFTDIETLKQES(ph)PNGSR ddPTM_A549_MK2206_60min_R1 2 GGGQSVQFTDIETLKQESPNGSR 23 1 Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23 1 GGGQSVQFTDIETLKQES(1)PNGSR;GGGQSVQFTDIET(0.001)LKQES(0.998)PNGS(0.001)R 199.3 3.0391999999999995e-61 727910000.0 15050.0 16223.1 16313.5 13863.8 22585.4 17110.9 17860.3 16262.0 25272.0 22085.0 25073.0 True False 17590.072062827105 17048.786495537355 18626.99960426107 17260.431622369637 19263.117578698468 18921.564080703833 21105.285322532163 18567.188300286303 19547.932351091233 17095.983161301352 18846.682120403384 0.933324600608832 0.9046041306697888 0.9883437034307229 0.9158339654746723 1.0220959559690483 1.0039732171329712 1.1198408922960301 0.9851701313615037 1.037208152936833 0.9071083733509396 1.0 14.202022944966263 -6.770478430324026 24.947676644567682 1.022537921664635 0.9370905022038698 0.3135743208630487 0.05170238017281438 106.71527076659002 294533.5750457613 0.005361475016702907 0.010237505021136472 1.6963738522959891e-07 6.770478430324026 -0.08544741946076528 GGGQSVQFTDIETLKQES(ph)PNGSR ddPTM_A549_PD325901_60min_R1 4 GGGQSVQFTDIETLKQESPNGSR 23 1 Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23 1 GGGQSVQFTDIETLKQES(1)PNGSR;GGGQSVQFTDIETLKQES(1)PNGSR;GGGQSVQFTDIET(0.002)LKQES(0.998)PNGSR;GGGQSVQFTDIETLKQES(1)PNGSR 248.9 1.5727999999999996e-110 1054099000.0 40246.5 39280.100000000006 44849.899999999994 43470.299999999996 50877.0 47840.1 46813.3 49231.2 46257.5 49438.5 52256.0 True False 44332.29505209262 42590.371880522944 47893.68391835805 46155.36170278568 47303.5750361216 47450.50608693459 48594.80574872068 48249.24509487073 44313.458139789385 46316.94467277281 45828.843278076776 0.9673448396481771 0.9293355196005345 1.0450554823684375 1.007124736330954 1.0321791180522832 1.0353852005170197 1.0603541846749396 1.0528139408212338 0.9669338122044134 1.010650528352513 1.0 15.48396825203797 -5.747741866134485 24.999104624416542 1.0048567312944832 0.9483401689497136 0.35984716051724464 0.03147453554523955 253.16504797896695 462039.12564316083 0.00527601768532644 0.020217859671959743 1.7875497343744593e-06 5.747741866134485 -0.05651656234476954 GGGQSVQFTDIETLKQES(ph)PNGSRK ddPTM_A549_MK2206_60min_R1 2 GGGQSVQFTDIETLKQESPNGSRK 24 2 Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23 1 GGGQSVQFTDIET(0.005)LKQES(0.968)PNGS(0.027)RK;GGGQSVQFTDIETLKQES(0.984)PNGS(0.015)RK 200.47 4.792599999999999e-62 52470000.0 2749.6000000000004 3177.1000000000004 3659.7 3401.8 5212.0 3538.0 3172.2 2704.0 5327.9 5078.0 6110.8 True False 3213.665258734178 3338.8008195087064 4178.7004904964715 4235.241152712607 4445.321704294651 3912.3888116656703 3748.547678378106 3087.300280652697 4121.139156907998 3930.8762731758343 4593.31971049978 0.6996389237588064 0.7268818697458849 0.9097342997798437 0.9220436241421105 0.9677797289252862 0.8517562587081446 0.8160868205645199 0.6721283244437564 0.8972027676383089 0.8557811171276236 1.0 12.165321488142583 -14.9999999999999 0.13608333702429737 1.6074726785937843 0.7722048611670692 0.00463313970085244 0.10327230415003498 65.05585873819315 0.5989854797243335 10.50054811012098 0.26236832376957897 1.000000000000229e-15 14.9999999999999 -0.8352678174267151 GGGQSVQFTDIETLKQES(ph)PNGSRK ddPTM_A549_PD325901_60min_R1 2 GGGQSVQFTDIETLKQESPNGSRK 24 2 Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 Q02241;Q02241-2 KIF23 Kinesin-like protein KIF23 1 GGGQS(0.001)VQFT(0.014)DIET(0.182)LKQES(0.689)PNGS(0.114)RK;GGGQSVQFTDIET(0.001)LKQES(0.968)PNGS(0.031)RK 170.44 1.2112000000000002e-41 84077000.0 4850.6 4492.7 4263.4 4871.3 5739.2 5285.1 4720.5 5434.1 5604.9 5825.4 5771.4 True False 5343.0293411770135 4871.315596132023 4552.739961906885 5172.189137475012 5336.098391165148 5242.05989786932 4900.141210656716 5325.712612531016 5369.345544564787 5457.583249831017 5061.554387918943 1.0556103780945045 0.9624149466335901 0.8994746698313644 1.021857860466764 1.0542410457746922 1.0356620706044792 0.9681099589391962 1.0521891506772254 1.0608096116442982 1.0782425380743368 1.0 12.305364784872854 -6.487614293847951 24.7715646932042 1.028837779863613 0.9696872720622491 0.2714717862655829 0.044297725884981785 549.1050466650306 385719.279288755 0.006022176820684653 0.013988540439359992 3.2537614256357353e-07 6.487614293847951 -0.05915050780136388 GGGS(ph)CSGSAGGGGSGSLPSQR ddPTM_A549_MK2206_60min_R1 2 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGS(0.954)CS(0.045)GS(0.001)AGGGGSGSLPSQR;GGGS(1)CSGSAGGGGSGSLPSQR 194.49 2.4684999999999998e-55 10358900.0 1272.52 1441.57 1325.75 1235.94 1532.12 1491.9 1389.3200000000002 1451.62 1698.94 1831.98 1435.0 True False 1487.2902658730068 1514.9397555566916 1513.7612851533456 1538.7453554834556 1306.7471775870915 1649.7718677569287 1641.741460350631 1657.3915803998032 1314.1328026496892 1418.1344456346321 1078.6498960147906 1.3788443046886576 1.404477728272936 1.403385186190746 1.4265475398167156 1.211465538925128 1.529478539656121 1.5220336704395505 1.5365426599708094 1.2183126401855877 1.3147309899848973 1.0 10.075010961123795 -9.28222950013784 1.3328431428181873 1.059663565745533 1.4219408766472 0.3689950136996707 0.12411928793940387 0.15164012281871303 0.5588122296013452 0.02438306406140417 0.02095695980627235 5.221202050057578e-10 9.28222950013784 0.3622773109016668 GGGS(ph)CSGSAGGGGSGSLPSQR ddPTM_A549_PD325901_60min_R1 2 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGS(0.997)CS(0.003)GSAGGGGSGSLPSQR;GGGS(0.968)CS(0.031)GSAGGGGSGSLPSQR 189.55 1.0592999999999999e-44 9931400.0 1927.6599999999999 2255.2 1615.27 2158.1800000000003 1959.7 1912.06 1719.16 1632.37 1400.12 2025.54 2336.5 True False 2123.3546241317117 2445.253618625088 1724.8919356075764 2291.4858770175974 1822.0574325979812 1896.488817301472 1784.5835745604497 1599.811099780508 1341.2778254484558 1897.647058719182 2049.1253122938288 1.0362248767279094 1.1933158035551403 0.8417698640776149 1.1182751309886783 0.8891878996694138 0.9255113906032947 0.8709001659653278 0.7807287773872891 0.6545611522152369 0.9260766275903941 1.0 11.000792498341074 -7.024912629236072 1.0779818339463507 0.8304739032334948 1.0579557586189408 0.3507407931044123 0.11704166514137941 0.4839612188155066 1.1022145749486019 0.02382021634510043 0.0610828358474045 9.442508202545664e-08 7.024912629236072 0.22748185538544596 GGGSCSGSAGGGGS(ph)GSLPSQR ddPTM_A549_MK2206_60min_R1 2 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGSCSGSAGGGGS(0.664)GS(0.336)LPSQR;GGGSCSGSAGGGGS(0.942)GS(0.058)LPSQR 228.3 7.043699999999999e-76 16908300.0 1887.4 2381.2 2209.15 2068.3 3009.0 2532.2 2347.89 2704.5 3666.4 3372.3 3710.2 True False 2205.9469775003245 2502.392909072466 2522.4406887395917 2575.033592849516 2566.380085998199 2800.1557232616765 2774.4712214195765 3087.8711571838858 2835.9662540377058 2610.4950878359327 2788.8549436892545 0.7909866314460133 0.8972832791949228 0.9044718135833788 0.9233300565439652 0.9202271677146631 1.004052121677391 0.9948424272469868 1.1072182739985306 1.0168927073296001 0.9360454883976944 1.0 11.44545718229024 -6.147361632987159 0.6202580726731457 1.0165737715207455 0.7938262634320556 0.6789022855611284 0.04467313509154877 0.5601418825596036 0.26333807852911334 0.007063640557286924 0.0720144131247846 7.122596910880247e-07 6.147361632987159 -0.22274750808868982 GGGSCSGSAGGGGSGS(ph)LPSQR ddPTM_A549_MK2206_60min_R1 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGSCSGS(0.001)AGGGGS(0.146)GS(0.852)LPS(0.001)QR 64.52 0.0014888 1285400.0 192.58 0.0 248.33 249.69 288.69 394.99 161.48 140.2 347.16 322.56 491.36 True False 225.0827958710461 0.0 283.5469281102248 310.86406120900995 246.2240834253305 436.78757962685813 190.81882576902368 160.07377934449275 268.52881430060273 249.69347197235084 369.3417511538869 0.6094160629494199 0.0 0.7677088420802026 0.8416705131164224 0.666656511634778 1.1826108969870288 0.5166456951397262 0.4334028818686077 0.727047005819604 0.6760499488407841 1.0 8.528812546761895 -9.938496583051771 0.07137130368567096 1.6606984710636625 3.9031020103189395e-21 0.07219135810744604 0.28244673832457723 44.78275569069513 1.1381188794888777 15.85707649096539 10.401319287583194 1.1521351245750741e-10 9.938496583051771 -1.6606984710636625 GGGSCSGSAGGGGSGS(ph)LPSQR ddPTM_A549_PD325901_60min_R1 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGSCSGSAGGGGS(0.16)GS(0.833)LPS(0.007)QR 204.78 5.567300000000001e-56 10927000.0 2276.5 2116.3 2024.8 2348.3 2564.6 2150.4 2175.1 2226.2 1783.3 2480.5 2669.3 True False 2507.608604129275 2294.6480281554973 2162.2151041115217 2493.3491576237484 2384.471343389695 2132.887855362848 2257.8746207603913 2181.7966945798853 1708.3541025928 2323.880806675222 2340.9930220868473 1.0711730366004681 0.980202848323727 0.9236315886939481 1.0650818409535818 1.0185725975654936 0.9111038927666316 0.9644943831347429 0.9319962400549795 0.7297561703408711 0.992690189483619 1.0 11.192904918806287 -7.83235835608252 1.4179473476588291 0.8745662555977297 1.0042528697808355 0.1454410208495477 0.08238382813671752 0.45053156884454826 1.8395942316656437 0.018013826599689895 0.02781527934880271 1.4710981316679623e-08 7.83235835608252 0.1296866141831058 GGGSGGGEES(ph)EGEEVDED ddPTM_A549_MK2206_60min_R1 2 GGGSGGGEESEGEEVDED 18 0 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 GGGSGGGEES(1)EGEEVDED;GGGSGGGEES(1)EGEEVDED 92.06299999999999 4.8594e-06 13976400.0 271.79 0.0 305.96000000000004 330.53999999999996 244.02 0.0 245.33 220.79 176.12 426.22 422.13 True False 317.6615073724768 0.0 349.34972868604024 411.5223148385043 208.12498125133936 0.0 289.9032853970435 252.08765864101682 136.22910120584788 329.93660597735425 317.30347080468545 1.0011283726802085 0.0 1.1009956109212582 1.296936065007038 0.6559177582379793 0.0 0.913646751678591 0.7944686454318305 0.4293337884403509 1.039814046599084 1.0 8.309719491948401 -11.097690332085273 1.4449961358679706 0.9992906860049017 0.6529531830607433 0.08763391564069734 0.39669474822708206 0.8509251067921193 3.186543281520076 0.2808895585729053 0.06187143247035886 7.98563889692738e-12 11.097690332085273 -0.3463375029441583 GGGSGGGEES(ph)EGEEVDED ddPTM_A549_PD325901_60min_R1 2 GGGSGGGEESEGEEVDED 18 0 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 GGGSGGGEES(1)EGEEVDED;GGGSGGGEES(1)EGEEVDED 139.3 2.0476e-13 26614000.0 523.03 785.87 427.82 849.8299999999999 803.6700000000001 790.14 553.27 794.05 931.3800000000001 850.79 566.42 True False 576.1276205656643 852.0980229110047 456.8544378906517 902.3220689960357 747.2229917109862 783.7053618100824 574.3249926109609 778.2120498298259 892.2373375611966 797.0709742032707 496.75393083221496 1.1597847239990111 1.7153322198849632 0.9196795627269232 1.8164366963022716 1.5042115327787318 1.5776530655673644 1.1561559093227316 1.5665946488356568 1.7961354348347598 1.6045589671891125 1.0 8.95638757339402 -11.054632810509469 1.3781231359262847 1.001560290144996 1.5066995761753779 0.0 0.32418521980184506 0.40633349263598856 1.3834313356592893 0.1877496195051704 0.042331004293337894 8.81794101651439e-12 11.054632810509469 0.5051392860303818 GGGSS(ph)TLSR ddPTM_A549_PD325901_60min_R1 1 GGGSSTLSR 9 0 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 GGGS(0.075)S(0.61)T(0.315)LSR 72.928 0.0024283 24295000.0 2676.8 2713.1 2495.3 2973.9 3472.9 2653.0 2291.6 2729.7 2859.5 3723.4 4025.7 True False 2948.54676544399 2941.7424586252787 2664.646063457864 3157.5910487830633 3228.9754848545845 2631.394847599347 2378.808092011637 2675.253992091777 2739.32515917911 3488.3038885605806 3530.564421014879 0.8351488356630566 0.8332215781463236 0.7547365649518152 0.8943587121617788 0.914577699144886 0.7453184629450662 0.6737755804291022 0.7577411634717492 0.7758887340714992 0.9880300916752143 1.0 11.785683126035822 -10.661647681549416 0.9350328260406471 0.9996903478097194 0.7980248698413397 0.5616332376085378 0.06633864561237875 0.3625215867740814 0.5655997268417458 0.04853043111899866 0.013008478170956383 2.179477141410489e-11 10.661647681549416 -0.20166547796837975 GGGSST(ph)LSR ddPTM_A549_MK2206_60min_R1 2 GGGSSTLSR 9 0 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 GGGS(0.024)S(0.111)T(0.864)LS(0.002)R;GGGS(0.019)S(0.144)T(0.837)LSR 77.66199999999999 0.002008 32986000.0 6541.5 6363.4 6125.5 4756.200000000001 7148.4 6189.3 6165.4 5939.6 8662.5 9701.6 9977.400000000001 True False 7645.545275679966 6687.269879721039 6994.1880084531895 5921.469213513931 6096.879829428222 6844.247617875166 7285.573373769747 6781.556489262119 6700.457581169979 7510.001821946176 7499.736217768631 1.0194418915115813 0.8916673447630505 0.9325912012588283 0.7895569979494191 0.8129459026816552 0.91259844601728 0.9714439497896631 0.904239334870875 0.8934257668016411 1.0013687953655255 1.0 12.87262413840267 -7.525439471727336 23.618647802492312 0.9455868652068995 0.8838984974449805 0.18011471367134813 0.06460321941335936 59.31479712487416 547081.853006806 0.01059053490233566 0.01576976677623186 2.982363175385965e-08 7.525439471727336 -0.061688367761918994 GGGSST(ph)LSR ddPTM_A549_PD325901_60min_R1 1 GGGSSTLSR 9 0 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 GGGS(0.041)S(0.217)T(0.742)LSR 84.81700000000001 0.0014019 26489000.0 3960.0 4359.5 3950.8 3784.6 4260.8 3902.0 2941.1 3938.6 4145.6 4737.6 4642.6 True False 4362.016284802079 4726.890364666579 4218.925046090383 4018.366146549777 3961.5361069620258 3870.2234057039777 3053.0251699316727 3860.041533228071 3971.3748487123357 4438.467127476127 4071.5896318661808 1.0713300404006538 1.1609446904156808 1.0361862141191946 0.986928082118136 0.9729703789294422 0.9505435850935919 0.7498361686642627 0.9480428732349561 0.9753868163997872 1.0901066975754603 1.0 11.991376446786472 -6.081852950567865 2.4329810962204417 0.9637076422119903 1.1161418724419125 0.3706130975246894 0.07909974940181655 0.2294469554751219 2.6247264458853534 0.010623942622176521 0.03703133874356334 8.282225472862637e-07 6.081852950567865 0.1524342302299222 GGGT(ph)PDANSLAPPGK ddPTM_A549_MK2206_60min_R1 2 GGGTPDANSLAPPGK 15 0 Q5T171;Q9BRQ0 Q5T171;Q9BRQ0 PYGO2 Pygopus homolog 2 1 GGGT(1)PDANSLAPPGK;GGGT(0.931)PDANS(0.069)LAPPGK 161.76 1.0089000000000001e-19 89450000.0 5387.9 5816.299999999999 5889.2 4958.1 7047.799999999999 5632.6 4896.0 5043.5 8155.1 8777.8 8337.2 True False 6297.245798492103 6112.324826574072 6724.377115236721 6172.834722577569 6011.077956164204 6228.637993382721 5785.53982514949 5758.431570070966 6307.982871018679 6794.888883553136 6266.84314498573 1.0048513506406649 0.9753435158920019 1.0730086839044433 0.9849990784461584 0.9591875553760795 0.9939036049380655 0.9231984415915462 0.9188727780235639 1.0065646650284947 1.0842602449671825 1.0 12.613523168520162 -4.134532722224181 13.732773017155228 0.9918640941151496 0.9917017032580469 0.0 0.04954991929242922 0.0 0.0 0.005474274953918723 0.0 7.336134377138459e-05 4.134532722224181 -0.0001623908571027899 GGGT(ph)PDANSLAPPGK ddPTM_A549_PD325901_60min_R1 1 GGGTPDANSLAPPGK 15 0 Q5T171;Q9BRQ0 Q5T171;Q9BRQ0 PYGO2 Pygopus homolog 2 1 GGGT(0.935)PDANS(0.065)LAPPGK 149.35 7.4802e-14 37727000.0 5819.4 5248.1 6165.9 4958.9 7082.8 6595.4 6511.9 6291.1 6607.3 6868.9 7294.9 True False 6410.181203984147 5690.375805208555 6584.355052568767 5265.199990520973 6585.328562333514 6541.689249097898 6759.713917948412 6165.619075227522 6329.618158504687 6435.196481746192 6397.673546181149 1.0019550322023643 0.8894445401336883 1.0291795924002798 0.8229866610908644 1.0293317586147201 1.022510636386365 1.0565893788037013 0.9637283038469285 0.9893624788471608 1.0058650906918252 1.0 12.64333166265467 GGGTSSGGSSTNS(ph)LTGSRPPK ddPTM_A549_MK2206_60min_R1 2 GGGTSSGGSSTNSLTGSRPPK 21 1 Q5T9C2-3;Q5T9C2;Q5T9C2-2 Q5T9C2-3 FAM102A Protein FAM102A 1 GGGTSSGGSST(0.002)NS(0.998)LTGSRPPK;GGGTSSGGSSTNS(0.999)LTGSRPPK 127.14 6.7526000000000006e-18 35169000.0 5048.299999999999 6160.8 6888.799999999999 5474.200000000001 8184.200000000001 5095.1 5482.1 4955.9 9042.1 8927.5 8769.2 True False 5900.329620914955 6474.358405095604 7865.735426109277 6815.37924574618 6980.31502154418 5634.260100146345 6478.126608548209 5658.414001807213 6994.078787266621 6910.771549581974 6591.565622392275 0.8951332595204521 0.9822186072306547 1.1933030598054741 1.03395454679137 1.058976792680525 0.85476811169203 0.9827902777059974 0.8584324765856775 1.061064880171558 1.0484264202885762 1.0 12.68640545814974 -4.3145376947542236 14.110245311361066 1.0094456466035866 1.0049437953933729 0.0 0.09647425222686727 0.0 0.0 0.012383179942639171 0.0 4.846880421162403e-05 4.3145376947542236 -0.0045018512102137365 GGGTSSGGSSTNS(ph)LTGSRPPK ddPTM_A549_PD325901_60min_R1 2 GGGTSSGGSSTNSLTGSRPPK 21 1 Q5T9C2-3;Q5T9C2;Q5T9C2-2 Q5T9C2-3 FAM102A Protein FAM102A 1 GGGTSSGGS(0.001)S(0.007)T(0.006)NS(0.784)LT(0.189)GS(0.012)RPPK;GGGTSSGGSS(0.003)T(0.025)NS(0.969)LT(0.003)GSRPPK 118.01 3.2204999999999998e-15 62416000.0 4649.9 5472.1 6379.200000000001 5528.1 6609.7 6617.299999999999 6011.2 6792.200000000001 6680.799999999999 6814.200000000001 6694.0 True False 5121.954424924541 5933.253071336619 6812.130873245864 5869.558181773985 6145.457474227119 6563.410902758821 6239.959505454858 6656.724242622178 6400.029209107817 6383.95024908135 5870.68043676221 0.8724635040345331 1.0106584978093134 1.1603647901848464 0.9998088373229792 1.0468049726815745 1.1179983263368811 1.062902260252529 1.1338931345909684 1.0901682144084737 1.0874293564175361 1.0 12.519312012162805 -5.326660679732918 3.708335550335417 1.0597310139379645 0.8635885347161204 0.5615185687131683 0.05091131898799537 0.14543778931564594 3.4258203028483543 0.0075527564056096135 0.06813447459430733 4.7134545126803945e-06 5.326660679732918 -0.19614247922184413 GGHERPPS(ph)PGLR ddPTM_A549_MK2206_60min_R1 2 GGHERPPSPGLR 12 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 GGHERPPS(1)PGLR;GGHERPPS(1)PGLR 55.66 0.0050207 11035500.0 1927.8400000000001 1826.44 1656.74 1249.4 1958.38 1507.9899999999998 1588.22 1873.19 2539.6 2061.3 2366.1 True False 2253.2122608372483 1919.39799464401 1891.6906442126758 1555.5030560876967 1670.3048962502999 1667.5645008772524 1876.779015747329 2138.720418903782 1964.3846549078548 1595.6508983649755 1778.5320689620899 1.2668943676411586 1.0792034780481221 1.0636247033299897 0.8745993863329393 0.9391480341566465 0.9376072155113877 1.0552404696546032 1.2025200198677832 1.1044977423737006 0.8971729698954265 1.0 10.796471272733742 -2.10263986688492 0.003677678238010789 0.036428393465391846 2.1197604894782436 0.036486118099383735 0.11627823662957874 505431.5901390111 142.17808128477571 38108.11088157835 42548.53382775203 0.007895145410267422 2.10263986688492 2.083332096012852 GGHFAAFEEPELLAQDIR ddPTM_A549_MK2206_60min_R1 2 GGHFAAFEEPELLAQDIR 18 0 P07099 P07099 EPHX1 Epoxide hydrolase 1 0 ; 84.14 0.00012921 2928400.0 638.89 809.15 534.76 444.76 966.67 664.45 535.39 593.73 1045.46 861.5 796.3299999999999 False True 746.7190126391764 850.3322788409146 610.5970091258562 553.726219966035 824.4741235400057 734.7616579737864 632.6634327995883 677.8930457218664 808.6649792565621 666.8865516622648 598.5792834100756 1.247485560116876 1.4205842106606412 1.02007708260018 0.9250674644325895 1.3773849954228599 1.227509334749921 1.0569417457873536 1.1325033533735822 1.3509738837763294 1.1141156570989996 1.0 9.225398538375618 -11.10890240514274 1.4644325516383934 1.0004118355857494 1.2108006269751406 0.08957687075118592 0.15128882766661175 0.5471586951417173 2.105375728479291 0.11095654610302726 0.02430864468206242 7.78211411420776e-12 11.10890240514274 0.21038879138939115 GGHFAAFEEPELLAQDIR ddPTM_A549_PD325901_60min_R1 2 GGHFAAFEEPELLAQDIR 18 0 P07099 P07099 EPHX1 Epoxide hydrolase 1 0 ; 126.63 2.6546e-11 5782600.0 835.71 617.0899999999999 693.44 809.24 860.6600000000001 718.6700000000001 638.79 827.6400000000001 705.89 828.71 959.5799999999999 False True 920.5506639828144 669.094339977543 740.5010083934679 859.2249168826138 800.2102107158133 712.817389794279 663.0995030093004 811.1320709289809 676.2238980985989 776.3851091714671 841.5577432787981 1.0938651225479212 0.7950664649233463 0.8799170518096567 1.0209934181521312 0.9508678603539547 0.8470213666112405 0.7879429644670544 0.9638460074869306 0.8035383234238437 0.922557145213338 1.0 9.716918454893696 -7.214954384144689 24.849307713539986 0.8960814202500366 0.9398948244031028 0.08982917081644204 0.0923107140896482 1229.91473650864 657470.8727446573 0.015184516820006556 0.026300316873181198 6.096009229377955e-08 7.214954384144689 0.04381340415306623 GGHGAAS(ph)PSEK ddPTM_A549_PD325901_60min_R1 2 GGHGAASPSEK 11 0 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 1 GGHGAAS(0.702)PS(0.298)EK;GGHGAAS(0.797)PS(0.203)EK 174.24 2.9098e-15 52115000.0 9692.0 10487.0 7141.8 8456.2 9510.2 7782.700000000001 5511.5 6517.5 8468.900000000001 10967.3 11913.2 True False 10675.924705126698 11370.776294129699 7626.485495132195 8978.520268576392 8842.236360408902 7719.320271545958 5721.2431485085235 6387.503349620159 8112.981584393066 10274.822806308875 10447.951923996947 1.0218198535739949 1.0883258629869077 0.7299502860092242 0.8593569662159767 0.8463128874186315 0.7388357381140084 0.5475947046969007 0.6113641597976045 0.7765140616467712 0.9834293726705972 1.0 13.35093254303468 -5.751588654439317 24.99169158071332 0.82634936235696 1.0550729596518387 0.3388164969711013 0.13547427433789652 223.87988049027854 567980.0977835535 0.022017723205481607 0.0832098042957064 1.771786325695172e-06 5.751588654439317 0.22872359729487868 GGHGAASPS(ph)EK ddPTM_A549_MK2206_60min_R1 2 GGHGAASPSEK 11 0 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 1 GGHGAAS(0.318)PS(0.682)EK;GGHGAAS(0.288)PS(0.712)EK 123.67 6.2804e-06 34460000.0 6684.4 6684.700000000001 6077.6 4074.8 5474.0 5422.4 5136.0 6252.8 5526.9 11953.0 12500.9 True False 7812.563302110399 7024.922677337776 6939.495068186289 5073.126182924725 4668.781851363953 5996.19476890219 6069.144718539171 7139.153548396891 4275.065974645701 9252.808998280967 9396.581522711713 0.831426118448213 0.7476040792450326 0.7385127294871439 0.5398906156098241 0.4968596121982681 0.638125126080083 0.6458885823392193 0.7597607205494279 0.45495970681601466 0.9846994862883651 1.0 13.197920284301215 -10.997818691509993 1.264195773111811 1.0007952642020699 0.6303450075072942 0.571614995660715 0.11295604183007556 0.28235359883477834 0.8003049266293426 0.09005751049338748 0.02036199225662273 1.0050352830551147e-11 10.997818691509993 -0.3704502566947757 GGHMIAVS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 GGHMIAVSPQK 11 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 GGHMIAVS(1)PQK 65.563 0.0013692 5467800.0 1820.3 1661.6 1756.3 1504.8 1730.7 912.84 1068.7 1212.1 1748.2 2109.3 2453.6 True False 2127.52213793782 1746.1683427325763 2005.3697492851759 1873.476067553038 1476.1163226444276 1009.436122905849 1262.8689565231334 1383.9188869005675 1352.235491301745 1632.8076650275286 1844.3034040849427 1.1535640682685815 0.946790175014042 1.0873318049749774 1.0158177138335704 0.8003652324096899 0.5473264977281133 0.6847403489718711 0.7503748482138727 0.7331957899696342 0.8853248665111322 1.0 10.848860295940403 -6.7127886799602665 5.361803427333715 0.8177853506179141 1.049533012026555 0.529267888228201 0.12205830565622001 0.18208728947449018 11.544011379791154 0.02239287889594805 0.04668125720705258 1.9373644220147613e-07 6.7127886799602665 0.23174766140864078 GGHMIAVS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 GGHMIAVSPQK 11 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 GGHMIAVS(1)PQK;GGHMIAVS(1)PQK 82.36200000000001 0.00017158 29031000.0 5522.799999999999 6557.5 5561.799999999999 5441.1 7007.3 5726.3 6200.5 6111.5 6258.4 5909.8 7580.1 True False 6083.470590329524 7110.1235385482505 5939.257193820363 5777.184389365316 6515.131421872651 5679.666911348712 6436.463420543793 5989.601338121002 5995.3812121722485 5536.654219427222 6647.79575421291 0.9151109353012605 1.0695460271989177 0.893417519642729 0.8690375882418077 0.9800438615677708 0.8543684435174373 0.9682101644691492 0.9009905778656346 0.9018600200484188 0.8328556448080519 1.0 12.69866034232529 -10.899183417923826 1.1535898413234966 0.9999536048257567 0.9271079267204281 0.0 0.07554632020146558 0.6657463089182697 1.5751116618089072 0.03846320142510307 0.00920813302496253 1.2612947327013639e-11 10.899183417923826 -0.0728456781053286 GGIDNPAIT(ph)SDQELDDKK ddPTM_A549_MK2206_60min_R1 1 GGIDNPAITSDQELDDKK 18 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.5)S(0.5)DQELDDKK 187.57 4.5093e-40 173460000.0 37831.0 40946.0 41000.0 37946.0 52426.0 42135.0 39813.0 39114.0 56025.0 54476.0 56045.0 True False 44215.94792085129 43029.97650549357 46814.416512379554 47242.77170346066 44714.20484830227 46593.69773305063 47046.50675218072 44658.529281601186 43335.4269535409 42169.83376477484 42127.479736689194 1.0495749614554615 1.021422994550001 1.1112560448663267 1.1214241155356017 1.0614023228491467 1.106016738344586 1.1167652811475333 1.060080725472587 1.0286736169455608 1.0010053776857855 1.0 15.36247398925122 -8.79092439020566 2.055393781905332 1.011274578486839 1.0842012538216592 0.5443752884911881 0.029753118739945163 0.18273402443778272 1.5109796414055165 0.005922162924321792 0.006330695767196833 1.618361766641238e-09 8.79092439020566 0.07292667533482011 GGIDNPAIT(ph)SDQELDDKK ddPTM_A549_PD325901_60min_R1 1 GGIDNPAITSDQELDDKK 18 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.5)S(0.5)DQELDDKK 231.04 1.1741999999999997e-64 299590000.0 38449.0 37626.0 44108.0 38581.0 46570.0 43004.0 43431.0 46252.0 46384.0 42572.0 48617.0 True False 42352.314175342224 40796.87506845848 47101.43412295091 40964.06074619163 43299.08385777824 42653.78968193074 45083.79047135513 45329.46757600795 44434.641784704996 39883.99665461701 42637.417208555176 0.9933133137071035 0.9568327009327527 1.1046971699191017 0.9607538033043008 1.0155184505193318 1.0003839930851224 1.0573762066973675 1.0631382138905123 1.0421513471925126 0.9354224356398001 1.0 15.379832428029633 GGIDNPAITS(ph)DQELDDK ddPTM_A549_PD325901_60min_R1 2 GGIDNPAITSDQELDDK 17 0 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.02)S(0.98)DQELDDK;GGIDNPAIT(0.096)S(0.904)DQELDDK 241.68 4.177399999999999e-74 17798500.0 5576.4 5984.299999999999 5506.2 5851.799999999999 7124.4 5379.7 5953.7 6543.1 6414.299999999999 7431.599999999999 7092.5 True False 6142.512022871293 6488.617962902673 5879.883843470403 6213.25239559794 6624.006721845721 5335.8895068338525 6180.271311489648 6412.592737537347 6144.729277329106 6962.367507715208 6220.167463061837 0.9875155386648836 1.0431580823884592 0.945293495454553 0.9988882827504305 1.064924177874963 0.8578369535098168 0.9935860004076883 1.0309357064127642 0.9878720008455211 1.1193215534888554 1.0 12.602737706637996 -10.848447245909206 0.5868447202918735 1.0017512446574843 0.9894836267832454 0.01656741365135983 0.06324655552120931 11.7540832823333 5.311010655729869 0.07943818207403655 0.010781034313167627 1.4175968975900123e-11 10.848447245909206 -0.012267617874238912 GGIDNPAITS(ph)DQELDDKK ddPTM_A549_MK2206_60min_R1 1 GGIDNPAITSDQELDDKK 18 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.477)S(0.523)DQELDDKK 190.19 1.8701e-40 212300000.0 29338.0 31809.0 35063.0 29087.0 44049.0 32425.0 33184.0 31896.0 45989.0 42599.0 43182.0 True False 34289.537154765545 33427.94223277595 40035.460638379634 36213.316305765045 37569.45045135744 35856.19197802698 39213.10325934656 36417.35567740327 35572.56492934213 32975.856313709606 32458.71763742907 1.056404554788243 1.0298602244911008 1.2334270591212022 1.1156730438422016 1.1574533187360132 1.1046706274273814 1.2080915733445001 1.121959163149729 1.0959325419659338 1.0159321967693575 1.0 14.986318383296492 -9.941897653048494 0.7460426095313261 1.0066614172497135 1.1299375916049461 0.3926795130804841 0.05624580439633443 0.44152993425188314 0.5011380515362767 0.026358304541048466 0.01196065176417597 1.1431477001678813e-10 9.941897653048494 0.12327617435523264 GGIDNPAITS(ph)DQELDDKK ddPTM_A549_PD325901_60min_R1 1 GGIDNPAITSDQELDDKK 18 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.149)S(0.851)DQELDDKK 130.71 6.677399999999999e-13 313010000.0 8645.3 9833.5 10419.0 10431.0 11761.0 10661.0 10966.0 11086.0 11605.0 10836.0 11312.0 True False 9522.964491666515 10662.203555671249 11126.095994536727 11075.299179480184 10934.947933247371 10574.180350643283 11383.317130825446 10864.881033201245 11117.282207474595 10151.813110716666 9920.695712676143 0.9599089385937493 1.074743532557666 1.1215036038571757 1.1163833162757677 1.1022359973479754 1.065870847861219 1.1474313355141457 1.095173297102407 1.1206151795654327 1.023296490965368 1.0 13.276225581285674 -10.850428289232399 1.075566718251775 0.9995440633791112 1.0940116308214234 0.2801049506887515 0.04715612956347309 0.45973521505126197 0.9366554716855794 0.03284036891477 0.007860634680993536 1.4111452257255179e-11 10.850428289232399 0.09446756744231222 GGIMLPEK ddPTM_A549_PD325901_60min_R1 2 GGIMLPEK 8 0 P61604;B8ZZL8;S4R3N1 P61604;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 ; 48.756 0.021122 10607900.0 6304.6 6680.9 6468.7 7517.0 7080.1 8378.3 7104.2 7770.3 8638.4 6817.7 6707.1 False True 6944.638350798787 7243.922889620586 6907.704881453089 7981.308017654352 6582.818201019018 8310.069902616517 7374.554218567404 7615.315270817572 8275.358088845194 6387.229258484041 5882.169219809948 1.1806253936746087 1.2315053543894197 1.1743465077797057 1.3568647414588026 1.119114047050776 1.412756007533733 1.253713373925287 1.2946440311799838 1.4068548148828282 1.085862888298615 1.0 12.522132573319054 -10.972053616749399 1.2452365463217419 1.000265886277904 1.28213390242507 0.4587550613652187 0.09332393675701633 0.2746089799801045 0.7584877732580958 0.0653936363962247 0.015159346248749705 1.0664644504645152e-11 10.972053616749399 0.28186801614716606 GGIPAS(ph)PIDPFQSR ddPTM_A549_MK2206_60min_R1 2 GGIPASPIDPFQSR 14 0 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 GGIPAS(1)PIDPFQSR;GGIPAS(1)PIDPFQSR 192.65 8.0122e-27 34502000.0 5039.5 5094.200000000001 5096.6 3780.6 5962.700000000001 5037.6 5333.3 4536.9 6877.5 6097.1 6256.2 True False 5890.044396054301 5353.473020912547 5819.374516999846 4706.847169717584 5085.594728740929 5570.675488311758 6302.291574646603 5180.019468673534 5319.757231110715 4719.760875380143 4702.612877663928 1.2525046286566208 1.138403938444523 1.2374768385975843 1.0009004126352326 1.0814402250493669 1.1845915522349033 1.3401680594591772 1.1015194325854785 1.131234351944649 1.0036464829579452 1.0 12.199246858095092 -10.130283182389306 0.6670185125850822 1.0010011534153125 1.1648504395134358 0.34084997135858053 0.08700365073453017 0.6742850613988708 0.5763610361585928 0.055306504111864836 0.019363091698989567 7.408270263680136e-11 10.130283182389306 0.16384928609812333 GGIPAS(ph)PIDPFQSR ddPTM_A549_PD325901_60min_R1 2 GGIPASPIDPFQSR 14 0 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 GGIPAS(1)PIDPFQSR;GGIPAS(1)PIDPFQSR 117.07 3.4154000000000004e-06 36392000.0 3581.8 3117.8 3425.8 3426.1 4432.6 3449.7 3784.6 3894.9 3561.1000000000004 4257.9 4910.200000000001 True False 3945.4216992182037 3380.5479479200512 3658.2953890089148 3637.72241576235 4121.26946763985 3421.60678694439 3928.6250240125864 3817.2131640100583 3411.439351058834 3989.055467342242 4306.276528322345 0.916202587843395 0.7850280690722519 0.8495263518142265 0.8447489128571005 0.9570378122571308 0.7945627189616158 0.9123020777170374 0.886430107055197 0.7922016453476282 0.9263351856543018 1.0 12.072225250063621 -10.963211916637091 1.2003533555015125 1.0008405035625652 0.8536770652572928 0.3000963281393162 0.056995125862280845 0.3121380462143016 0.7921511882096808 0.03814627411847021 0.008632706927027592 1.0883988728799945e-11 10.963211916637091 -0.14716343830527234 GGITQPNINDSLEITKLDS(ph)SIISEGK ddPTM_A549_MK2206_60min_R1 1 GGITQPNINDSLEITKLDSSIISEGK 26 1 G5EA36;P30260;P30260-2;I3L328 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 GGIT(0.001)QPNINDS(0.026)LEIT(0.026)KLDS(0.459)S(0.459)IIS(0.03)EGK 41.423 0.021929 1478400.0 574.27 583.71 760.24 595.56 1154.4 714.64 650.81 811.64 1201.9 1515.1 1401.3 True False 671.1927364464933 613.418345773009 868.0534636432053 741.4722267357039 984.5892892244333 790.2627304603611 769.0537527789095 926.6924555432536 929.6715690399084 1172.837857717351 1053.3185360874747 0.6372172457342504 0.582367370132435 0.8241129666886601 0.7039392181304279 0.9347497983674202 0.7502599673179323 0.730124579061848 0.8797836777708569 0.8826119898099867 1.1134693044269663 1.0 10.040726075194732 -3.7446899585032916 0.11134158410644432 1.110812787628499 3.7343780503236504e-11 0.6935871862650697 0.08435677011840262 24.608023534556665 0.27635882552776436 0.39837678794349846 4.134556221240629 0.00018001555820552467 3.7446899585032916 -1.1108127875911553 GGLASLAK ddPTM_A549_PD325901_60min_R1 2 GGLASLAK 8 0 F8VS45;Q92994-9;Q92994-3;Q92994-7;Q92994-8;Q92994-5;Q92994;F8VWT8 F8VS45 BRF1 Transcription factor IIIB 90 kDa subunit 0 ; 110.63 0.0043744 11380800.0 9553.1 9999.8 8829.4 10732.900000000001 12367.2 12307.3 11333.599999999999 12383.5 12525.3 11528.8 12801.8 False True 10522.923679379479 10842.518240301155 9428.6161794954 11395.846856815544 11498.57053652383 12207.073429272315 11764.906349983881 12136.501377832185 11998.90519890405 10800.869600482682 11227.259757296442 0.937265540021088 0.9657314852143464 0.8397967432229286 1.0150158723645402 1.0241653604790846 1.0872709541915697 1.04788760608643 1.0809851771662127 1.0687296329013967 0.9620218854795218 1.0 13.454718230977532 -6.441945058614122 6.665534216399351 1.0410604328331343 0.9195532015889221 0.6012418781781981 0.0443025711480227 0.11989231545003977 8.286542651777426 0.005810919823599593 0.013559016110064053 3.614555864873483e-07 6.441945058614122 -0.12150723124421225 GGLFS(ph)R ddPTM_A549_PD325901_60min_R1 1 GGLFSR 6 0 C9JM95;Q9C0E8;Q9C0E8-4 C9JM95 KIAA1715;LNP Protein lunapark 1 GGLFS(1)R 63.148 0.0603 12359000.0 2170.4 2788.0 2398.7 2265.6 3657.2 3014.4 3173.6 3644.0 2370.7 2780.4 3178.3 True False 2390.7374102359686 3022.9545444868504 2561.4902065548754 2405.5409664490753 3400.330888655071 2989.851725821134 3294.3730846605536 3571.3175613373032 2271.067723331322 2604.8450694939675 2787.3892489036916 0.857697722403238 1.0845110870954995 0.9189567648516745 0.8630086262244138 1.2198981143349301 1.0726351646068353 1.181884835767471 1.2812410619514079 0.8147651872534688 0.934510696889026 1.0 11.444698768356325 -8.80449358899132 24.999953085228828 0.912528046413012 1.0593474828481502 0.17796884849614347 0.13732909981891117 179.0100568158448 103943.61384581738 0.025596548850258024 0.027249695566056595 1.5685790527055497e-09 8.80449358899132 0.14681943643513817 GGLHDFRS(ph)PPPGMGLNQNR ddPTM_A549_MK2206_60min_R1 2 GGLHDFRSPPPGMGLNQNR 19 1 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 GGLHDFRS(1)PPPGMGLNQNR;GGLHDFRS(1)PPPGMGLNQNR 93.583 1.4765e-06 13799500.0 2148.2 2098.3 2105.69 1649.67 3206.8 2303.5 2195.8 1690.4299999999998 2965.9 2976.9 2937.8 True False 2510.7636415525026 2205.094507436066 2404.308505023232 2053.8392240565004 2735.083968022273 2547.2548410604522 2594.7484371044243 1930.053629224757 2294.128385569068 2304.4162224531588 2208.2631808447754 1.1369856923448793 0.9985650834392407 1.0887780613647053 0.9300699490315281 1.238567935084604 1.1535105340505631 1.175017751331523 0.8740143140395119 1.0388835920777544 1.0435423831916628 1.0 11.10869640744529 -8.235222568085295 24.999750077227453 1.0080486698119935 1.098999091486163 0.26223381743127605 0.08976833723708155 953.419436750244 909160.3786545605 0.014123255209604734 0.018229651669443084 5.818049768036822e-09 8.235222568085295 0.09095042167416945 GGLHDFRS(ph)PPPGMGLNQNR ddPTM_A549_PD325901_60min_R1 4 GGLHDFRSPPPGMGLNQNR 19 1 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 GGLHDFRS(1)PPPGMGLNQNR;GGLHDFRS(1)PPPGMGLNQNR;GGLHDFRS(1)PPPGMGLNQNR;GGLHDFRS(1)PPPGMGLNQNR 96.633 7.995100000000001e-07 33513700.0 4610.8099999999995 5238.610000000001 4956.18 4618.24 5173.0 4716.21 4698.26 5122.0 4991.89 5637.0 5762.0 True False 5078.896036901077 5680.0860496033965 5292.536178731456 4903.49819601597 4809.666325881184 4677.802749414443 4877.054855286522 5019.837691868731 4782.098223065087 5281.078857983564 5053.310528327431 1.0050631182133418 1.1240326549818063 1.0473403819264606 0.9703536263066251 0.951785230478031 0.9256907374268813 0.9651207516235408 0.9933760578790753 0.9463297765411399 1.0450730918631121 1.0 12.303013121636145 -6.203069665235517 4.1801663797907205 0.9693304863285982 1.0684704630339412 0.4696861609805063 0.03957605102353778 0.11056588481016277 3.973426992366062 0.004669795096919863 0.012846937379131756 6.265133575204869e-07 6.203069665235517 0.09913997670534302 GGLLMK ddPTM_A549_MK2206_60min_R1 1 GGLLMK 6 0 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 0 59.89 0.03918 6173600.0 5008.5 5595.2 6232.5 5356.3 7347.0 5732.9 6406.1 5208.6 7914.7 7139.6 7402.6 False True 5853.812353931534 5879.971780968533 7116.362217400134 6668.593740453445 6266.266032512051 6339.551672808972 7570.00544809848 5946.935000668508 6122.033087178763 5526.759401332452 5564.330118633518 1.0520246335364996 1.056725905114438 1.2789252373020172 1.1984540094273037 1.1261492217235511 1.1393198350290963 1.3604522533176937 1.068760277315996 1.1002282317286747 0.9932479352410721 1.0 12.441992298788733 -9.431834901427255 0.8507995056374179 1.0183887230508124 1.1662361720412884 0.32100369853293387 0.09008787510101737 0.46000719427917763 0.7115422074454483 0.028076043507462616 0.019823336871782345 3.6996879798838226e-10 9.431834901427255 0.14784744899047597 GGLLTSEEDSGFS(ph)TSPKDNSLPK ddPTM_A549_PD325901_60min_R1 1 GGLLTSEEDSGFSTSPKDNSLPK 23 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDS(0.023)GFS(0.309)T(0.309)S(0.309)PKDNS(0.051)LPK 66.325 0.00024649 2689800.0 1099.5 1034.8 904.67 1254.0 1015.1 902.44 1015.6 1482.7 1467.1 1272.2 1084.5 True False 1211.120430590881 1122.0062276309159 966.0663464226451 1331.4567319593668 943.8028779048892 895.0908278430287 1054.2492137576448 1453.1263853443513 1405.44288897768 1191.8730748849894 951.1133752119225 1.2733712532651797 1.1796766367426132 1.0157215444556131 1.3998927642697676 0.9923137477638726 0.9410979291964945 1.1084369552922564 1.5278161607395886 1.4776817628755625 1.2531345956725948 1.0 9.893473514148548 GGLLTSEEDSGFST(ph)SPK ddPTM_A549_MK2206_60min_R1 1 GGLLTSEEDSGFSTSPK 17 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFS(0.078)T(0.844)S(0.078)PK 157.52 3.867e-22 7327600.0 2282.4 2721.3 2354.9 2222.1 3446.5 2286.2 2209.2 2613.1 4119.1 3223.0 3464.6 True False 2667.613320677515 2859.8025463879158 2688.860230365916 2766.5145997538607 2939.524415550944 2528.1241665432626 2610.583043652013 2983.5149272831227 3186.1304268510553 2494.922061529285 2604.244201904423 1.0243330171290201 1.0981314825608939 1.0324915875399148 1.0623099775861162 1.1287437688836317 0.9707707766785099 1.0024340427610263 1.1456356224586572 1.2234376578514077 0.9580215479427033 1.0 11.346649022089537 -8.267872898924631 24.715064200446406 1.111469616656245 1.0480804445133507 0.0 0.07848418277152193 824.4174440599438 3167091.714934929 0.01462107349404528 0.017912870499568034 5.396685393627123e-09 8.267872898924631 -0.0633891721428943 GGLLTSEEDSGFST(ph)SPK ddPTM_A549_PD325901_60min_R1 2 GGLLTSEEDSGFSTSPK 17 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFS(0.014)T(0.863)S(0.122)PK;GGLLTSEEDSGFS(0.003)T(0.934)S(0.063)PK 187.16 2.3395e-39 17645700.0 9531.9 8228.900000000001 8843.0 8651.4 10585.4 12562.1 10150.5 10310.099999999999 10221.2 10633.099999999999 11486.2 True False 10499.571470986097 8922.378282327061 9443.139157278843 9185.777329245022 9841.918021647538 12459.798422550974 10536.78283206673 10104.45696738301 9791.638509180462 9961.724251343796 10073.470217020922 1.0422993511456657 0.8857303481427 0.9374266219919902 0.911878144407874 0.9770136615898128 1.2368923671901988 1.0459933473832046 1.0030760750460879 0.9720223813870761 0.9889069046446068 1.0 13.298273143574137 -6.999311205604197 24.99693423454488 1.0123452703321087 0.9402532448321711 0.20924716655376963 0.07872073657404655 37.81768352827375 1372309.1242426743 0.011965255498747922 0.02247723747059668 1.0015872660833144e-07 6.999311205604197 -0.07209202549993765 GGLLTSEEDSGFSTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GGLLTSEEDSGFSTSPK 17 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFST(0.209)S(0.791)PK 161.76 2.0899000000000002e-22 9076800.0 1916.4 2361.6 2819.4 1609.9 3952.3 2608.6 2195.2 2527.9 3090.1 3082.6 3483.6 True False 2239.841468518397 2481.7953527908367 3219.23331500007 2004.3255722711574 3370.921905580152 2884.640320551463 2594.0394248709476 2886.2375663690686 2390.1972838757124 2386.238519041321 2618.5259775310988 0.8553825655112469 0.9477833613592103 1.2294066748328973 0.7654404002365308 1.2873356745379538 1.101627535989264 0.9906487264704402 1.1022375149741246 0.9128025860294622 0.9112907565237172 1.0 11.3545392020212 -8.769178628146076 24.966650587937107 0.9588234469714271 1.0387276588979706 0.07261308693857704 0.14494855878930923 380.2503379875324 1226677.0681808726 0.02360613719289235 0.025360166181386614 1.701458543485549e-09 8.769178628146076 0.07990421192654351 GGLLTSEEDSGFSTS(ph)PKDNSLPK ddPTM_A549_MK2206_60min_R1 2 GGLLTSEEDSGFSTSPKDNSLPK 23 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFS(0.01)T(0.104)S(0.886)PKDNSLPK;GGLLTSEEDSGFST(0.017)S(0.983)PKDNSLPK 198.05 3.487199999999999e-61 101240000.0 4397.9 4001.8 4335.1 3921.8 5632.0 4421.799999999999 4516.9 4195.5 5835.3 6282.1 5579.9 True False 5140.158001668259 4205.474526930205 4949.882366410159 4882.641176056293 4803.540260665283 4889.711941046715 5337.562262299376 4790.224973179881 4513.613867059304 4862.969246892064 4194.256832594378 1.225522948838779 1.002674536821077 1.1801571920783844 1.1641254627309296 1.1452661227934462 1.1658112834311485 1.2725883214447318 1.1420914751700755 1.0761415066390645 1.1594352565872919 1.0 12.034199491295782 -9.091732191994693 1.4975661882855202 1.0242907577373586 1.1606902525565514 0.11396369557237229 0.07546240827457067 0.22869613601753236 1.050900024948124 0.013561579595121508 0.01279373092717159 8.09594982612076e-10 9.091732191994693 0.1363994948191929 GGLLTSEEDSGFSTS(ph)PKDNSLPK ddPTM_A549_PD325901_60min_R1 2 GGLLTSEEDSGFSTSPKDNSLPK 23 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFS(0.003)T(0.268)S(0.729)PKDNSLPK;GGLLTSEEDSGFS(0.094)T(0.094)S(0.812)PKDNSLPK 200.54 2.5939999999999996e-61 161088000.0 6849.6 5967.1 7183.4 6429.6 7585.1 8320.6 7972.4 7739.7 6825.400000000001 7418.599999999999 8718.1 True False 7544.966349590989 6469.968458539272 7670.908721293323 6826.741789318935 7052.34874317444 8252.839792286133 8275.794044664679 7585.325611822806 6538.552173967861 6950.188329933807 7645.828968589273 0.9868081512923387 0.8462088918179191 1.0032801875123132 0.8928713704380092 0.9223785638087146 1.079391106731604 1.082393299492238 0.9920867499109609 0.8551789741608992 0.9090169762476628 1.0 12.900457213198782 -3.2531482155777933 12.288183231627773 0.9504130390429975 1.037310180867113 0.0 0.07868688027737741 0.0 0.0 0.011336180807561122 0.0 0.0005582796331176108 3.2531482155777933 0.08689714182411556 GGLRAT(ph)AGPR ddPTM_A549_MK2206_60min_R1 4 GGLRATAGPR 10 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PP16 PPFIBP2 Liprin-beta-2 1 GGLRAT(1)AGPR;GGLRAT(1)AGPR;GGLRAT(1)AGPR;GGLRAT(1)AGPR 96.82 0.00020922 112383000.0 9263.77 10481.83 9714.88 7871.839999999999 11493.0 8299.05 7121.119999999999 8535.22 12178.3 13441.4 13704.4 True False 10827.2678985685 11015.310375484227 11092.596065555757 9800.441153380321 9802.394924685035 9177.249962536456 8414.935326729683 9745.113573014982 9419.934494748908 10404.97840454227 10301.219257801471 1.0510666385795675 1.0693210288813093 1.0768236058226748 0.9513865211594352 0.9515761852424742 0.8908896833339612 0.8168873136407382 0.9460155472018197 0.914448499638998 1.0100725112381448 1.0 13.33052748521819 -6.288533959028563 6.166937692207129 0.9415250846910324 1.066317855720675 0.5729470756071 0.05000047994905288 0.1122689980551213 15.264589728152117 0.007851335593444874 0.018937082597111285 5.145955673847654e-07 6.288533959028563 0.12479277102964259 GGLRAT(ph)AGPR ddPTM_A549_PD325901_60min_R1 5 GGLRATAGPR 10 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PP16 PPFIBP2 Liprin-beta-2 1 GGLRAT(1)AGPR;GGLRAT(1)AGPR;GGLRAT(1)AGPR;GGLRAT(1)AGPR;GGLRAT(1)AGPR 100.04 0.00018256 184656600.0 8299.82 7319.85 9467.66 8935.52 9443.169999999998 9133.26 8839.04 9238.46 9377.630000000001 9731.17 9973.029999999999 True False 9142.411616395451 7936.7194485158125 10110.192341264574 9487.446776361689 8779.914316367951 9058.881758682708 9175.414504108285 9054.191667868334 8983.520822686765 9116.74226546814 8746.41053424598 1.0452758397972466 0.9074258997379694 1.1559247421189296 1.0847246123668939 1.0038305750674277 1.0357256526220977 1.0490491462963656 1.0351894222683988 1.0271094396395408 1.042340995745872 1.0 13.094475351103231 -9.801823861774043 0.6244445501088187 1.001071005314256 1.0402175845036943 0.0 0.0572783201248612 1.6578764347262436 1.3519676611229279 0.029250555922743372 0.013180216344806945 1.57825123640251e-10 9.801823861774043 0.03914657918943831 GGLS(ph)PANDTGAK ddPTM_A549_MK2206_60min_R1 5 GGLSPANDTGAK 12 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(0.999)PANDT(0.001)GAK 199.31 1.4384999999999999e-24 1514467560.0 43277.8 45802.8 41950.32 40395.46 55199.7 44595.0 42299.95 42874.05 64838.9 63206.5 60342.3 True False 50582.0345993767 48133.9668804235 47899.5061782343 50292.349513421104 47079.897252600436 49314.0133002348 49985.3033755785 48951.57788377138 50152.99267644701 48928.10775117928 45357.641547242776 1.1151822024673042 1.0612096493220224 1.0560404938238248 1.1087955148866928 1.0379705744524619 1.0872261347378747 1.1020260681657297 1.0792355204973632 1.10572311446594 1.0787180744443612 1.0 15.469058006237091 -10.844156023581487 1.0311813375575791 0.9988219639836329 1.083618789257658 0.054528982778826895 0.03232053266874252 0.26834127050471795 0.4949283126139304 0.016892838181572098 0.003909038358384438 1.4316734673372493e-11 10.844156023581487 0.08479682527402521 GGLS(ph)PANDTGAK ddPTM_A549_PD325901_60min_R1 3 GGLSPANDTGAK 12 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK 200.9 1.1692e-24 3079743700.0 41924.4 42277.4 41807.7 42212.8 51528.2 43679.5 45100.6 45680.6 44856.4 44996.6 49015.2 True False 46180.53422488796 45840.264870548184 44645.021932123316 44820.1887837754 47909.03699463967 43323.78863389206 46816.92801299528 44769.46459726254 42971.24150033288 42155.506996832206 42986.64113295294 1.0742996663092765 1.0663839663296628 1.0385789807126635 1.042653894384339 1.1145098973065215 1.0078430761756045 1.0891041211662873 1.04147389554805 0.9996417577132294 0.9806652924207284 1.0 15.391600765745357 -8.655950731609401 3.7700921788283615 0.9997255283812849 1.0606798323958053 0.5494594193980171 0.026856050898507507 0.12040590015884528 3.2645035769320807 0.00411276732201883 0.0046400484233462816 2.2082552335776827e-09 8.655950731609401 0.0609543040145204 GGLS(ph)PANDTGAKK ddPTM_A549_MK2206_60min_R1 2 GGLSPANDTGAKK 13 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(0.979)PANDT(0.021)GAKK;GGLS(0.981)PANDT(0.019)GAKK 56.851000000000006 0.0061903999999999995 37952000.0 6463.5 9045.7 9941.7 7011.4 12057.2 7017.299999999999 8337.0 5771.1 15675.5 14959.400000000001 16850.1 True False 7554.380782596879 9506.08749269142 11351.582552222526 8729.193314753704 10283.601852076265 7759.86602829325 9851.724984124048 6589.17109825251 12125.024278629733 11580.06115024548 12665.755130898144 0.5964414047582483 0.7505346025126678 0.8962420664939519 0.6891964375230035 0.8119217327192273 0.6126650916661918 0.777823736706447 0.5202351561477933 0.9573076499047976 0.9142811487011847 1.0 13.628645472480295 -8.886411486757796 8.907485485740375 0.9811826043943911 0.7169574619462363 0.5377805676878046 0.10258248354628148 0.12521661146237664 9.349588334178225 0.016545844299810243 0.017587791096904466 1.2989382725169415e-09 8.886411486757796 -0.26422514244815476 GGLS(ph)PANDTGAKK ddPTM_A549_PD325901_60min_R1 4 GGLSPANDTGAKK 13 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(0.915)PANDT(0.085)GAKK;GGLS(0.994)PANDT(0.006)GAKK;GGLS(0.965)PANDT(0.035)GAKK;GGLS(1)PANDTGAKK 86.49700000000001 9.134200000000001e-05 79964000.0 23262.999999999996 27106.3 25096.0 28513.5 29609.1 36017.5 29146.3 34043.2 30763.600000000002 32544.9 35733.7 True False 25624.642634684544 29390.64303056811 26799.165474507477 30274.714136143055 27529.45896184971 35724.185421564056 30255.478395967355 33364.18166962623 29470.712875300746 30490.00945985262 31338.68143458762 0.8176681807168615 0.9378391714378412 0.8551465552386003 0.9660493916865853 0.8784498167005272 1.1399390078402047 0.9654355898514363 1.0646325927677074 0.9403941559192325 0.9729193464470925 1.0 14.935656859685404 -6.612852216621674 1.5975742035710998 0.9872900210193957 0.8768268704008124 0.3918357280368898 0.06810568347852759 0.3422567724024136 1.7366868919190799 0.00983656083518725 0.02736134784561373 2.438640507064087e-07 6.612852216621674 -0.11046315061858325 GGLVS(ph)DAYGEDDFSR ddPTM_A549_MK2206_60min_R1 2 GGLVSDAYGEDDFSR 15 0 J3KS14;F5H478;J3KRU5;J3QLH3;Q9UHR5;X6R3T8;J3QQJ0;Q9UHR5-2 J3KS14 SAP30BP SAP30-binding protein 1 GGLVS(1)DAYGEDDFSR;GGLVS(1)DAYGEDDFSR 155.98 1.9196999999999998e-19 18752100.0 4171.6 4455.3 4163.2 3615.6 6040.0 4319.7 4478.700000000001 5213.0 5648.3 6042.7 7182.7 True False 4875.664094172062 4682.055739875087 4753.604361569231 4501.42216231045 5151.524001139621 4776.807786815208 5292.4218167681865 5951.958714142943 4368.969068481661 4677.649873162585 5399.037357564766 0.9030617443942318 0.8672019528286662 0.8804540600017893 0.8337453261002837 0.9541560207805663 0.8847517567409063 0.9802528610684278 1.1024111003424455 0.809212602013238 0.8663859061113142 1.0 12.39848648392508 -6.7690852362275855 24.995217876870374 0.9288068801218472 0.8715032314010323 0.1600096597691949 0.07456321428354347 351.3772993934566 1148698.5495966133 0.012867063635669574 0.024651382793883455 1.701824469305182e-07 6.7690852362275855 -0.05730364872081495 GGLVSDAYGEDDFS(ph)R ddPTM_A549_MK2206_60min_R1 2 GGLVSDAYGEDDFSR 15 0 J3KS14;F5H478;J3KRU5;J3QLH3;Q9UHR5;X6R3T8;J3QQJ0;Q9UHR5-2 J3KS14 SAP30BP SAP30-binding protein 1 GGLVSDAYGEDDFS(1)R;GGLVSDAYGEDDFS(1)R 154.6 2.1510000000000001e-19 10202900.0 3593.6000000000004 3778.2 3655.5 3174.2 6396.5 5323.5 3865.9 5123.5 6904.299999999999 4766.799999999999 5212.1 True False 4200.111824915316 3970.494242003023 4173.904867341549 3951.8791424952506 5455.583323392315 5886.829236546696 4568.283988979865 5849.771815060688 5340.487073901518 3689.976569313622 3917.7917233579774 1.0720610286335894 1.0134520981120134 1.065371811997207 1.008700671588549 1.3925148932410019 1.5025886142566653 1.1660354382147564 1.49312986195366 1.3631370555155837 0.9418511319307468 1.0 11.935824988121224 -6.735959570209939 24.992306002070066 1.2377120811955273 1.039827107970161 0.27493621311941585 0.1725813533284772 299.00832202981144 293285.82848926383 0.02741583726399893 0.05705392597658605 1.836709320229197e-07 6.735959570209939 -0.19788497322536625 GGLVSDAYGEDDFS(ph)R ddPTM_A549_PD325901_60min_R1 2 GGLVSDAYGEDDFSR 15 0 J3KS14;F5H478;J3KRU5;J3QLH3;Q9UHR5;X6R3T8;J3QQJ0;Q9UHR5-2 J3KS14 SAP30BP SAP30-binding protein 1 GGLVSDAYGEDDFS(1)R;GGLVSDAYGEDDFS(1)R 193.06 3.4644e-34 12296700.0 5570.9 6219.3 6310.2 6771.8 6019.5 6388.700000000001 5873.5 6815.1 6783.6 6910.6 7290.700000000001 True False 6136.453666920173 6743.42223763525 6738.44811831516 7190.078706126345 5596.711086147648 6336.672545366739 6097.0192566025235 6679.16748415748 6498.50888260445 6474.2635366296245 6393.9901195551565 0.9597221065688947 1.0546500872767073 1.0538721506163304 1.1245057580143045 0.8753080598343218 0.9910357111730405 0.9535546884809241 1.0446008453673001 1.0163464067186525 1.0125545106535216 1.0 12.642500799428035 -6.708378693458848 24.999999936451676 0.9976317507997262 1.049054842768857 0.21336082052786676 0.05515423259937601 135.62740410307194 63901.1429455704 0.007550891457474814 0.015718424463549027 1.957137356526875e-07 6.708378693458848 0.05142309196913086 GGNDS(ph)DELANGEVGGDRNEK ddPTM_A549_MK2206_60min_R1 1 GGNDSDELANGEVGGDRNEK 20 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4;A0A0A0MRH6 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 GGNDS(1)DELANGEVGGDRNEK 94.72 6.100800000000001e-07 3431400.0 1298.6 1192.6 1181.2 1185.8 2126.3 1674.9 1539.4 1487.2 1871.7 2071.7 2003.7 True False 1517.7719322782245 1253.2982459935422 1348.7119215712855 1476.3210532325847 1813.5240866925792 1852.1368062913607 1819.0890536836462 1698.0151543589852 1447.76293849072 1603.701531141862 1506.1259906932673 1.0077323820562958 0.8321337349849802 0.8954841294189975 0.9802108604161572 1.2040985268820819 1.2297356381446052 1.2077934149760754 1.127405784676348 0.9612495551081467 1.0647857755935017 1.0 10.556626744277239 -6.520999384000239 24.994009133964475 1.0436821525214452 0.9094899357459787 0.31997764826852326 0.1041292094455613 94.28608127563275 1253923.8012957152 0.01834137225746949 0.03864045028718495 3.0130102978123893e-07 6.520999384000239 -0.13419221677546656 GGNDS(ph)DELANGEVGGDRNEK ddPTM_A549_PD325901_60min_R1 2 GGNDSDELANGEVGGDRNEK 20 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4;A0A0A0MRH6 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 GGNDS(1)DELANGEVGGDRNEK;GGNDS(1)DELANGEVGGDRNEK 117.08 9.386700000000001e-15 8812600.0 3339.8999999999996 3825.3 3643.4 3235.2 3788.2 4037.5 3803.8 3631.2 3962.7999999999997 3395.4 3950.5 True False 3678.964189295569 4147.671455891516 3890.6630335440173 3435.030956327707 3522.129900580533 4004.6199386288586 3948.5556905192266 3558.7728673787055 3796.257297008213 3181.0138645374113 3464.6135442828063 1.0618685582888392 1.1971526991043115 1.1229717207462473 0.9914615042696708 1.0166010885666132 1.1558633848895365 1.1396814219106792 1.02717743895312 1.0957231588708283 0.9181439210692396 1.0 11.758478722496303 -14.999998092490632 0.22965200529413007 0.48103969083368586 1.1028729115238427 0.35880158607881774 0.06413834328343657 49.16386506329196 0.6149883802409402 11.517343739594773 0.03822285546331344 1.0000043922122818e-15 14.999998092490632 0.6218332206901569 GGNFGGR ddPTM_A549_MK2206_60min_R1 2 GGNFGGR 7 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;Q32P51;P51991;P51991-2 F8W6I7;P51991 HNRNPA1;HNRNPA1L2;HNRNPA3 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoprotein A3 0 ; 114.94 0.020271 20130600.0 10332.8 10027.8 8141.6 7132.8 10315.2 7867.1 7928.9 7872.200000000001 10951.0 13884.4 14264.2 False True 12076.724027294344 10538.172187803155 9296.201304321694 8880.336320203558 8797.847744462808 8699.591300241662 9369.478496656006 8988.108457601398 8470.615985153532 10747.904396865404 10722.005468107449 1.1263493628329606 0.9828545806238297 0.8670207576346792 0.8282346382510318 0.820541247682811 0.8113772489781461 0.8738550380827049 0.8382861288717378 0.7900216065314773 1.002415492963046 1.0 13.388287155521786 -5.428483202477382 2.3858926447316477 0.8751480941095436 1.1435730723757083 0.5653259723633188 0.06753699665794655 0.2771073391296708 2.389401878329868 0.011595955038120987 0.13038295462533858 3.7283510507781694e-06 5.428483202477382 0.2684249782661646 GGNLPPVS(ph)PNDSGAK ddPTM_A549_MK2206_60min_R1 2 GGNLPPVSPNDSGAK 15 0 Q9UK61-2;Q9UK61-3;Q9UK61;A0A087X0F1;Q9UK61-4 Q9UK61-2 FAM208A Protein FAM208A 1 GGNLPPVS(0.999)PNDS(0.001)GAK;GGNLPPVS(1)PNDSGAK 140.84 1.9955e-13 41930000.0 19033.0 19921.3 18344.7 17729.7 23633.0 19792.5 17435.5 18012.3 28008.0 28127.0 30662.0 True False 22245.305087826455 20935.209079247998 20946.254307186562 22073.47729591647 20156.617006445787 21886.929212801813 20603.30466123243 20565.598685355257 21664.23271958545 21773.09116495011 23047.779171850536 0.965182151475827 0.9083395377554324 0.908818769522459 0.95772686519298 0.8745578849984871 0.9496328930265642 0.8939388262794676 0.892302834560004 0.9399705090044039 0.9446936731996605 1.0 14.492340122303121 -9.957891119269446 0.8035710220677778 0.9950590434585972 0.9187815818687293 0.23320392770359466 0.031592597673291666 0.30796607047115016 0.4050073945259812 0.011572131679845958 0.00547095995349058 1.1018155079401251e-10 9.957891119269446 -0.07627746158986792 GGNLPPVS(ph)PNDSGAK ddPTM_A549_PD325901_60min_R1 3 GGNLPPVSPNDSGAK 15 0 Q9UK61-2;Q9UK61-3;Q9UK61;A0A087X0F1;Q9UK61-4 Q9UK61-2 FAM208A Protein FAM208A 1 GGNLPPVS(0.978)PNDS(0.022)GAK;GGNLPPVS(0.995)PNDS(0.005)GAK;GGNLPPVS(0.993)PNDS(0.007)GAK 131.56 2.3856e-09 32548000.0 14123.6 14105.3 15384.3 15178.0 15299.7 15673.400000000001 15940.8 15199.3 16221.8 15688.0 18122.9 True False 15557.417474755208 15294.00313355465 16428.37111131119 16115.510588260968 14225.101853099626 15545.761026899212 16547.435867140466 14896.138037879813 15540.054158829069 14697.457002669178 15893.898190528498 0.978829566432368 0.9622562665381021 1.0336275540698503 1.0139432375290118 0.8950039620598965 0.9780961750568687 1.0411187783373008 0.9372236980073729 0.9777371147431728 0.9247232382190352 1.0 13.956185387836841 -7.558394819223471 24.994982491207022 0.9889289909601823 0.9766953101052178 0.0 0.04398617667499844 725.4968358299562 510576.51484047034 0.0060369835978589335 0.008954308044425823 2.764427348371774e-08 7.558394819223471 -0.012233680854964457 GGNVFAALIQDQS(ph)EEEEEEEKHPPKPAKPEK ddPTM_A549_MK2206_60min_R1 2 GGNVFAALIQDQSEEEEEEEKHPPKPAKPEK 31 3 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 GGNVFAALIQDQS(1)EEEEEEEKHPPKPAKPEK;GGNVFAALIQDQS(1)EEEEEEEKHPPKPAKPEK 161.67 4.7507e-47 94733000.0 6871.1 7192.5 7174.9800000000005 6733.2 10646.300000000001 8506.1 7714.900000000001 8117.3 11497.300000000001 9574.6 10762.5 True False 8030.773697733641 7558.567528348611 8192.50005336569 8382.834302264837 9080.243373068335 9406.209856107796 9116.597466716872 9267.95213318866 8893.179907415377 7411.691210151509 8089.874220110936 0.992694506642591 0.9343244805411771 1.0126857143216925 1.0362131813403996 1.1224208344915179 1.1627139804874258 1.1269146118555915 1.1456237613866844 1.0992976732947801 0.9161689055345873 1.0 12.981901556732314 -6.195603387043111 2.334605823309004 1.0746088579583206 0.9654265996385143 0.29809579987067425 0.06876115789005326 0.2841626793477311 2.9864007013784364 0.009377471151834859 0.030172116486975584 6.373773305418593e-07 6.195603387043111 -0.10918225831980632 GGPAS(ph)PGGLQGLETR ddPTM_A549_MK2206_60min_R1 2 GGPASPGGLQGLETR 15 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR 155.1 2.0671e-19 230240000.0 6268.6 6514.9 5802.5 5658.8 7934.6 6087.6 5512.3 6482.8 8990.400000000001 8629.5 9391.5 True False 7326.586427444383 6846.4805826122165 6625.381751538597 7045.206254033187 6767.430850901063 6731.785791378169 6513.813557633078 7401.756752742355 6954.088754718684 6680.089956551959 7059.331357786005 1.0378584112450837 0.9698483093672848 0.9385282282055242 0.9979990875853647 0.9586504029786059 0.9536010494752348 0.9227238710715491 1.0485067745939813 0.9850917037700397 0.9462779997122863 1.0 12.785315826162893 -8.25330652086549 24.993644500915604 0.9969292750214239 0.9675482780429495 0.10950060420085728 0.036151819112145565 887.6382434227738 2727866.992206793 0.005077146072453876 0.006495488870856303 5.580761709138115e-09 8.25330652086549 -0.029380996978474405 GGPAS(ph)PGGLQGLETR ddPTM_A549_PD325901_60min_R1 2 GGPASPGGLQGLETR 15 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR 169.4 3.7010999999999996e-27 355290000.0 13113.400000000001 14057.6 13113.4 14018.400000000001 15180.6 13117.4 13901.1 15675.3 15028.099999999999 14484.1 15821.7 True False 14444.662714425149 15242.283287151498 14003.35418128015 14884.28472990366 14114.367026226935 13010.576243460113 14430.113967473799 15362.643844465045 14396.521218625488 13569.571454128038 13875.731202019804 1.041001912196348 1.0984850502820906 1.0091975678544256 1.0726847121207599 1.0171980719958307 0.937649775282923 1.0399534091128326 1.1071592279208176 1.037532437680104 0.9779355953618357 1.0 13.760276177947874 -14.999999999985901 0.23297459591346065 0.7705725796254489 1.043912668308183 0.15247443685449458 0.04430031765005994 83.24491110957494 1.0468110619208204 8.739110863546307 0.02718140959507542 1.000000000032464e-15 14.999999999985901 0.2733400886827341 GGPASVPSS(ph)SPGTSVK ddPTM_A549_MK2206_60min_R1 1 GGPASVPSSSPGTSVK 16 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.004)S(0.735)S(0.252)PGT(0.008)S(0.001)VK 193.98 1.6287e-35 37712000.0 4828.4 5583.2 4868.4 5573.9 6593.2 5898.7 5203.5 5605.8 7462.1 9280.1 7888.6 True False 5643.315876953779 5867.361032224676 5558.812325582159 6939.505750221876 5623.349013959224 6522.896518759834 6148.908594805018 6400.439317042491 5771.946264525086 7183.718964690641 5929.642905715873 0.9517126017005021 0.9894965220534342 0.9374615662308683 1.170307531256654 0.948345305674074 1.1000487925625495 1.0369778910088807 1.0793970933515733 0.9734053730219108 1.211492678212697 1.0 12.533729510231844 -2.023241763517515 22.193219634915877 1.0062437379733464 0.0030302988026069677 0.0 0.09370850243826082 0.0 0.0 0.00866014292117187 0.0 0.009478906436217974 2.023241763517515 -1.0032134391707395 GGPASVPSS(ph)SPGTSVK ddPTM_A549_PD325901_60min_R1 1 GGPASVPSSSPGTSVK 16 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.002)S(0.661)S(0.281)PGT(0.056)S(0.001)VK 180.11 4.3296999999999994e-29 58068000.0 4640.3 4336.3 4393.3 4570.7 5098.9 4735.8 4512.7 5040.7 4522.9 4982.5 4942.6 True False 5111.379839991687 4701.735219246173 4691.455757059046 4853.021758187139 4740.770854250065 4697.233214949484 4684.433267944191 4940.15928414735 4332.818241808431 4667.904099681232 4334.691533722867 1.179179602568342 1.0846758489428359 1.0823044086437614 1.1195771880032956 1.0936812498347341 1.0836372504032017 1.0806843420115175 1.1396795471405725 0.9995678373190198 1.0768711137496292 1.0 12.081713616378556 -8.77350235772982 24.99999999999506 0.9997959100518946 1.1044939521158297 0.4598108412559938 0.03691280684962806 73.82413976977924 152996.83259837516 0.00464528665619533 0.0049634617897674526 1.6846032812510533e-09 8.77350235772982 0.10469804206393507 GGPASVPSSS(ph)PGTSVK ddPTM_A549_MK2206_60min_R1 1 GGPASVPSSSPGTSVK 16 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPSS(0.018)S(0.976)PGT(0.006)SVK 261.1 1.0130999999999998e-78 36421000.0 10180.0 9912.8 10171.0 9240.2 13639.0 10738.0 9210.1 9504.0 14709.0 15104.0 15429.0 True False 11898.13512289567 10417.319179007867 11613.40074018079 11504.049414808347 11632.721167474043 11874.288032692475 10883.455952534592 10851.221104779313 11377.434985446374 11691.995909816418 11597.55348126287 1.025917676699523 0.8982342005008382 1.0013664311997805 0.9919376042019906 1.0030323366275473 1.0238614593911293 0.9384268820245596 0.9356474296333844 0.9810202646470119 1.0081433061469498 1.0 13.50153287863436 -7.498986528285651 0.002631499091684561 1.9598442005095698 1.9706963851964324e-09 0.01676177301913495 0.038597495722641005 88393.86716295854 91.63136001488238 33891.15795619451 34351.179265121595 3.169665783817809e-08 7.498986528285651 -1.9598441985388733 GGPASVPSSS(ph)PGTSVK ddPTM_A549_PD325901_60min_R1 1 GGPASVPSSSPGTSVK 16 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPSS(0.002)S(0.955)PGT(0.043)SVK 236.05 3.7627999999999992e-65 53818000.0 4050.8 4188.2 4518.2 4498.3 5165.1 4599.5 4490.8 5218.5 5065.6 4869.2 4918.3 True False 4462.034233958654 4541.154312489179 4824.832222143756 4776.149774619474 4802.321194627664 4562.043196959367 4661.699851460051 5114.412923665947 4852.710448098515 4561.757881017129 4313.380279672475 1.0344634473771617 1.052806388040982 1.1185733483508475 1.1072869686746325 1.1133544652344718 1.0576491988102135 1.0807532721909752 1.1857087926535188 1.1250365452282804 1.057583052093778 1.0 12.07460319837249 -10.80804443516462 1.1042897141466794 1.001092129106056 1.0995815023621702 0.24376080642105946 0.042687884122183925 0.37141393411394 0.818043864017659 0.02736278621417706 0.007132412417973206 1.5558064399621914e-11 10.80804443516462 0.09848937325611429 GGPEATLEVRGS(ph)R ddPTM_A549_MK2206_60min_R1 2 GGPEATLEVRGSR 13 1 I3L345;E7EX57;Q96FL8-2;Q96FL8;Q96FL8-3 I3L345 SLC47A1 Multidrug and toxin extrusion protein 1 1 GGPEATLEVRGS(1)R;GGPEATLEVRGS(1)R 75.316 0.00030093 5160300.0 1213.6399999999999 1864.09 1639.6 1503.8000000000002 2077.5699999999997 1298.29 1331.44 1221.72 1822.81 1940.77 2565.7 True False 1418.4727613507953 1958.9642188278588 1872.119934480426 1872.2310675081487 1771.9622051403373 1435.674186064846 1573.3454135614877 1394.902551360583 1409.946445429432 1502.3487090766962 1928.565880282334 0.735506510746284 1.0157621468140225 0.970731647604569 0.9707892723032422 0.918797860761142 0.744425793665223 0.8158110799570697 0.7232848852207087 0.7310854453273962 0.7789978680203337 1.0 10.91331271428612 -7.028452414167493 23.61926159351724 0.8442484518689164 0.9346531340770152 0.19886579094679646 0.10250188928007142 654.7675352411277 543543.3142062073 0.018751407423875942 0.032533059904020604 9.365858363838356e-08 7.028452414167493 0.09040468220809883 GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(ph)PGKQK ddPTM_A549_PD325901_60min_R1 1 GGPEGVAAQAVASAASAGPADAEMEEIFDDASPGKQK 37 1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 GGPEGVAAQAVAS(0.291)AAS(0.291)AGPADAEMEEIFDDAS(0.418)PGKQK 44.147 0.0080582 5760900.0 617.78 720.63 709.34 586.42 769.56 588.68 602.02 547.16 575.32 549.42 819.34 True False 680.4965708144008 781.3600191512048 757.4800780079356 622.6418315435495 715.5087604378741 583.8859852562317 624.9302005379845 536.2464645612839 551.1413011291926 514.729527435396 718.5663742241928 0.9470197816438398 1.0873873968773 1.0541546406562043 0.8665056616597052 0.9957448415400457 0.8125707049493235 0.8696902929986065 0.7462726949062258 0.767001241498724 0.7163284365917189 1.0 9.488977614851715 -6.263328343189236 24.733683513926636 0.8768330959524893 1.0353072908248495 0.3975203177783351 0.09502653580136512 132.09714832951695 1729668.3770269658 0.014585751940918969 0.03558518123805589 5.453454032735107e-07 6.263328343189236 0.15847419487236025 GGPGAAPGGASPAS(ph)SSSAASSPSSGR ddPTM_A549_MK2206_60min_R1 1 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGAS(0.022)PAS(0.274)S(0.051)S(0.232)S(0.17)AAS(0.125)S(0.125)PSSGR 173.56 4.2229999999999993e-48 24826000.0 481.58 363.29 558.88 705.42 945.92 569.81 480.72 699.92 1026.0 936.53 946.75 True False 562.8589304994205 381.7799092629498 638.1375878155778 878.2479316675074 806.7764210526466 630.1069159907336 568.0606014595313 799.1358034151021 793.6126381853275 724.9672225516664 711.645846029271 0.7909256179038658 0.5364745840830027 0.8967066854618166 1.2341081404013197 1.1336768500148917 0.8854220389348221 0.7982349712699176 1.122940305032333 1.1151791900611827 1.0187191095075225 1.0 9.475015645445165 -5.964180643410455 5.922680370726071 1.0460983189557151 0.6703629593276195 0.563422820715505 0.12672110543397944 0.0939811476972598 8.97226578624398 0.01772718232403534 0.05567203833191019 1.0859738222985179e-06 5.964180643410455 -0.3757353596280957 GGPGAAPGGASPAS(ph)SSSAASSPSSGR ddPTM_A549_PD325901_60min_R1 1 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGAS(0.015)PAS(0.397)S(0.397)S(0.095)S(0.023)AAS(0.043)S(0.029)PS(0.001)SGR 235.98 4.290999999999999e-111 26910000.0 774.19 571.21 668.34 754.15 902.37 830.54 811.42 710.99 639.61 554.13 1126.6 True False 852.7851988714452 619.3478713616693 713.6975714549069 800.7321327010819 838.9906442075015 823.7763576046592 842.2990321260617 696.8087466891352 612.7294160036903 519.1421372315823 988.0353421058118 0.8631120391441603 0.6268478919404296 0.7223401239208656 0.8104286340552067 0.8491504387073346 0.833751914024588 0.852498889696455 0.7052467831808711 0.6201492901030975 0.5254287120186696 1.0 9.948418837828461 -11.022443582738255 1.3272039038115102 0.9992689157355771 0.7499722947449174 0.0 0.16299133047376543 0.30310164300475234 0.9556422879691177 0.06702413131639351 0.015319050282089366 9.496343539589302e-12 11.022443582738255 -0.24929662099065963 GGPGAAPGGASPASSSSAAS(ph)SPSSGR ddPTM_A549_MK2206_60min_R1 1 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGAS(0.005)PAS(0.014)S(0.044)S(0.15)S(0.15)AAS(0.547)S(0.089)PS(0.001)SGR 114.9 5.9217e-17 27294000.0 402.57 754.8 518.54 563.67 871.26 480.29 682.49 849.41 1075.6 1256.9 1047.2 True False 470.5139741084588 793.2160959885342 592.076769227544 701.7691753041078 743.0988081511427 531.1139690093006 806.4895987063472 969.8164687090268 831.9783173802523 972.9654170450391 787.1513387503068 0.5977427096236079 1.0077046902414675 0.7521765384627738 0.8915301807378578 0.9440355006330772 0.6747291694282133 1.024567397657917 1.2320584631777696 1.0569483610370447 1.2360588989021266 1.0 9.620497226618625 -7.882962450983121 8.593061751448205 1.0469881220961799 0.827541321560015 0.5209879969332478 0.13629198591744895 0.17792770582056 12.712594784029637 0.018159937000098082 0.025120636862075742 1.3092951195085753e-08 7.882962450983121 -0.21944680053616483 GGPGAAPGGASPASSSSAAS(ph)SPSSGR ddPTM_A549_PD325901_60min_R1 1 GGPGAAPGGASPASSSSAASSPSSGR 26 0 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 GGPGAAPGGASPAS(0.009)S(0.014)S(0.06)S(0.02)AAS(0.708)S(0.189)PSSGR 276.68 5.566099999999999e-153 34050000.0 1532.6 1090.0 1049.6 1267.0 1605.1 903.5 1259.1 1043.0 1332.6 1210.9 1091.6 True False 1688.1884237595104 1181.8581253553327 1120.8321677575343 1345.2597124342242 1492.3633132943921 896.1421955544702 1307.0157395059564 1022.1965467823288 1276.5954562413294 1134.443567346513 957.3401202225309 1.7634155177442015 1.2345227160025565 1.170777390481661 1.405205615034208 1.5588642758933957 0.9360750444117651 1.3652574585531256 1.067746483396854 1.3334816219178076 1.1849953254678336 1.0 9.902887760863052 -4.346528792100509 0.03235866346442474 2.5628571145771206e-18 2.932335214834394 0.26723211820560144 0.20020547481840711 568.9937499466965 2.1370562380711733 70.14032273227338 131.97608931528936 4.502681292049529e-05 4.346528792100509 2.932335214834394 GGPGKLS(ph)PR ddPTM_A549_MK2206_60min_R1 5 GGPGKLSPR 9 1 Q12888;Q12888-3;Q12888-2 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR 55.258 0.005032399999999999 1187603000.0 20973.399999999998 22225.999999999996 20634.5 18455.2 26160.199999999997 21208.699999999997 19845.399999999998 20747.2 28690.5 28885.7 30684.0 True False 24513.19716960119 23357.20846507837 23560.78237865111 22976.72482848542 22312.069234207396 23452.990556804325 23451.052296981557 23688.17913563524 22192.147559313973 22360.40030801009 23064.31596468144 1.0628191708411572 1.0126989458887676 1.0215253040554038 0.9962023093886614 0.967384823741317 1.0168517719197945 1.0167677347506134 1.0270488477485795 0.962185377329073 0.9694803150568496 1.0 14.49337488552355 -2.0000000000084506 0.49270902844426023 0.9879866644934633 3.117648442233488 0.43893637826305065 0.021487515486904474 64.60871089494978 0.6252972183126756 0.004497685189984454 142.90696825145733 0.009999999999805418 2.0000000000084506 2.129661777740025 GGPGKLS(ph)PR ddPTM_A549_PD325901_60min_R1 4 GGPGKLSPR 9 1 Q12888;Q12888-3;Q12888-2 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR 58.172 0.0033315 1949748000.0 34776.7 35146.6 37332.7 35772.7 39947.0 41199.3 38671.1 39329.6 41225.3 40366.4 41814.9 True False 38307.20498274658 38108.52732900343 39866.321521762264 37982.2984333037 37141.260529668616 40863.78656038436 40142.74987213789 38545.140274525664 39492.74400584252 37817.65861502708 36671.9323864906 1.0445919396616905 1.0391742362352865 1.0871071941779766 1.0357321243124844 1.0127980205196636 1.114306879978814 1.094645066670277 1.0510801522072268 1.0769201794337695 1.0312425921945294 1.0 15.162388668804772 -10.808107597180584 0.9957492718127916 0.999102637291534 1.0626932415657087 0.24711509143525523 0.029469748688857954 0.46545259640244396 0.8001746602360389 0.02134927062671201 0.005018338205917032 1.5555801862799554e-11 10.808107597180584 0.06359060427417462 GGPGS(ph)AVSPYPTFNPSSDVAALHK ddPTM_A549_MK2206_60min_R1 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.937)AVS(0.053)PY(0.006)PT(0.004)FNPSSDVAALHK;GGPGS(0.994)AVS(0.005)PY(0.001)PTFNPSSDVAALHK 86.98200000000001 1.1370999999999999e-07 2926800.0 1258.55 1833.52 1308.68 1142.05 2219.0 1383.45 1323.28 1239.25 2114.0 2000.85 2303.5 True False 1470.9624714067136 1926.8383364028848 1494.2705024736806 1421.8523012685735 1892.5880394915253 1529.8457607402124 1563.7028471862375 1414.9174825439566 1635.18237536431 1548.8565953493242 1731.4773766341973 0.8495418370790981 1.1128290570844466 0.863003191747373 0.821178676924153 1.0930480900481123 0.8835493789205986 0.9031032506043508 0.8171735314811918 0.9443856428219268 0.8945289244033509 1.0 10.757787822164957 -9.849098828711274 1.241401179898754 0.9898848466030672 0.9236766120563183 0.0 0.09874658472453246 0.770062121192025 2.3974830368923814 0.02626680041611286 0.016899060614480297 1.4154716364314015e-10 9.849098828711274 -0.06620823454674885 GGPGS(ph)AVSPYPTFNPSSDVAALHK ddPTM_A549_PD325901_60min_R1 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.866)AVS(0.125)PY(0.007)PT(0.002)FNPSSDVAALHK;GGPGS(0.829)AVS(0.162)PY(0.008)PTFNPSSDVAALHK 103.12 3.3399e-11 7015600.0 2788.6 3831.8 2641.3 3737.3999999999996 3939.5 3346.3999999999996 3239.9 3810.8 3742.8999999999996 3866.8 3855.3 True False 3071.696619141181 4154.719233703271 2820.5545014271866 3968.250709748753 3662.803110537199 3319.1480278953836 3363.1961674413096 3734.790604485232 3585.5989292853624 3622.649588087782 3381.1225407602833 0.9084842628775223 1.2287987742582782 0.8342065297618445 1.1736488878798363 1.0833097784481884 0.9816704327874008 0.9946981000827783 1.1046007825689224 1.0604758881288876 1.0714339821807193 1.0 11.723286588897956 -10.873037120415184 1.1753919816034046 1.0005092499840225 1.0455297057651403 0.0 0.1087158174829328 1.7594981705424544 4.393275653894319 0.06239388988286412 0.015804810900028134 1.3395621862482197e-11 10.873037120415184 0.045020455781117796 GGPGSAVS(ph)PYPTFNPSSDVAALHK ddPTM_A549_MK2206_60min_R1 1 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.005)AVS(0.993)PY(0.001)PT(0.001)FNPSSDVAALHK 114.91 3.2357999999999997e-16 47886000.0 925.15 1092.5 1098.3 1018.0 1661.3 917.13 1080.6 1102.0 1612.2 1301.4 1454.0 True False 1081.292702254119 1148.1035835552118 1254.055455013329 1267.4100456997567 1416.924970710802 1014.1800878583774 1276.9310324870382 1258.2118747334596 1247.039274154372 1007.4128361384461 1092.9316716414678 0.989350688895429 1.0504806598118632 1.1474234735368867 1.1596425271455815 1.2964442402723406 0.9279446411642424 1.168353947112927 1.151226474061053 1.1410038765565744 0.9217528069485063 1.0 10.09398749348034 -10.764822907494542 0.9836094449901549 0.9990757941085394 1.1184365990726717 0.24984240204056607 0.0968337002173642 0.7707997365250242 1.3082678226001563 0.06486729254200371 0.015985343330866493 1.7186090424716534e-11 10.764822907494542 0.11936080496413226 GGPGSAVS(ph)PYPTFNPSSDVAALHK ddPTM_A549_PD325901_60min_R1 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.004)AVS(0.994)PYPT(0.002)FNPSSDVAALHK;GGPGS(0.004)AVS(0.995)PYPT(0.001)FNPSSDVAALHK 130.78 4.5067e-23 176093000.0 3728.5 3481.6 3829.8999999999996 4559.200000000001 5166.5 5342.2 4742.200000000001 5073.299999999999 4764.8 5134.0 4704.299999999999 True False 4107.014575223369 3775.0066506762632 4089.820045059619 4840.811429305537 4803.622863457402 5298.694894400765 4922.667016031413 4972.109051573141 4564.552026038336 4809.838363826077 4125.700923014705 0.9954707459071751 0.9149976503672048 0.991303083130692 1.1733306702630037 1.1643167920052067 1.2843138640619005 1.193171077566707 1.2051549892617894 1.1063700717072233 1.1658233239823557 1.0 12.010423526991117 -6.092000542814584 5.688924296425018 1.103779846219265 0.9545682762362411 0.42198670390477966 0.08383605788016728 0.22855344488810986 11.189508759019636 0.014831992472281222 0.040416945068961325 8.090948879088456e-07 6.092000542814584 -0.14921156998302387 GGPGSAVSPY(ph)PTFNPSSDVAALHK ddPTM_A549_MK2206_60min_R1 1 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.002)AVS(0.403)PY(0.577)PT(0.018)FNPSSDVAALHK 102.48 4.7738e-11 46987000.0 1235.8 1434.4 1229.9 952.97 1897.3 1440.3 888.98 1050.4 1837.8 1579.9 1756.1 True False 1444.3728275908124 1507.404833182238 1404.3183138676977 1186.4476927804485 1618.2096833381127 1592.7115900062379 1050.4961588564945 1199.297416715087 1421.541234363544 1222.9994927117962 1320.0119041056278 1.094211971193885 1.1419630599495072 1.0638679162664004 0.8988159039249911 1.2259053712356696 1.2065888080648617 0.7958232464337182 0.9085504554806794 1.0769154656424915 0.9265064117284895 1.0 10.366335224788783 GGPGSAVSPYPTFNPSSDVAALHK ddPTM_A549_MK2206_60min_R1 1 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 115.66 1.0625e-15 4668300.0 2275.8 3205.3 2505.2 2622.5 3328.0 3035.3 2994.8 2796.0 4773.6 4063.1 4098.4 False True 2659.89940203202 3368.4360790567675 2860.475030410078 3265.0126177284983 2838.4556085749427 3356.4934313309245 3538.9163946809012 3192.341562390881 3692.3872218727893 3145.2428880544967 3080.6541699142995 0.8634203176742866 1.09341584393112 0.9285284464402096 1.0598439284794265 0.9213808016152315 1.089539184277961 1.1487548421507339 1.0362544402313385 1.1985724518943675 1.0209659100235824 1.0 11.589021021127946 -7.328748467171153 9.079339680061544 1.0955658912896054 0.9823690158825832 0.3043363051868222 0.08021977515258873 0.4400711320502444 56.92047705474224 0.013182041151347147 0.021091732800405178 4.690849861294032e-08 7.328748467171153 -0.11319687540702217 GGPGSAVSPYPTFNPSSDVAALHK ddPTM_A549_PD325901_60min_R1 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 ; 116.45 9.886100000000001e-16 20765000.0 6014.0 6544.8 6390.5 6623.2 7870.8 6937.299999999999 7081.3 7996.4 8607.3 7684.8 7597.700000000001 False True 6624.5368527272 7096.353264977593 6824.19775919828 7032.3000216214305 7317.982160785932 6880.80492885448 7350.782746536045 7836.9055289455555 8245.565113692026 7199.580416503829 6663.231065788501 0.9941928753964467 1.065001827928931 1.0241574533166413 1.0553888874915154 1.0982633032732672 1.032652906813195 1.1031859279618397 1.176141942485401 1.2374724862878934 1.0804938843362561 1.0 12.702006208537847 -7.870741930142922 5.160795134465572 1.1208759619792048 1.0479720480980685 0.27946452762630847 0.05994062665674031 0.34534478795469803 14.461316958287945 0.014084662184294593 0.019638648429477837 1.3466603393643501e-08 7.870741930142922 -0.07290391388113626 GGPLQALTRES(ph)TR ddPTM_A549_MK2206_60min_R1 2 GGPLQALTRESTR 13 1 P42167 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GGPLQALT(0.104)RES(0.879)T(0.017)R;GGPLQALT(0.053)RES(0.907)T(0.041)R 55.656000000000006 0.004827399999999999 7751400.0 1486.52 1963.04 1319.57 1286.62 2216.27 1601.37 1266.56 1590.93 1948.84 2008.5 2073.06 True False 1737.4082340753314 2062.950351178236 1506.704868225382 1601.8419577585673 1890.2596188751158 1770.8259104966248 1496.6775573818104 1816.449199518787 1507.4308516579865 1554.778455036169 1558.2619884546511 1.1149654210575604 1.3238790180745479 0.9669137021814932 1.0279670361125441 1.21305636207536 1.1364109011301597 0.9604787695977139 1.1656892184864136 0.9673795952328437 0.9977644751368562 1.0 10.60572209679644 -8.252061559074807 0.8484405305151672 0.984291220651997 1.1313345608042447 0.20183226522682196 0.10241515000993824 0.546545236014105 0.7823128428120855 0.02151739118700658 0.029066813283162327 5.596782642723745e-09 8.252061559074807 0.14704334015224763 GGPLQALTRES(ph)TR ddPTM_A549_PD325901_60min_R1 2 GGPLQALTRESTR 13 1 P42167 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GGPLQALT(0.012)RES(0.932)T(0.056)R;GGPLQALT(0.154)RES(0.745)T(0.101)R 81.44800000000001 0.0001693 17979100.0 2806.4 2862.2 2600.5 2555.4 3553.8 2802.7 2873.6 2796.6 2626.0 2962.5 3300.5 True False 3091.303662037513 3103.4076388917742 2776.9855680768555 2713.2412542655225 3304.1933479444338 2779.8757404322223 2982.9564204942562 2740.81961910974 2515.6383521609873 2775.4472444165867 2894.5594235933186 1.0679703573678772 1.0721519874824994 0.9593810876508085 0.9373589749618244 1.1415185748173702 0.9603795720252558 1.0305390161212173 0.9468866304037644 0.8690919701479346 0.9588496341771884 1.0 11.499128059208976 -8.299847555560314 5.761922185256083 0.9368557293676282 1.0223145656731947 0.27508784791527063 0.06251195058352908 0.21681558946574395 20.180893311490582 0.011552974765415546 0.014125722212014974 5.013631893926498e-09 8.299847555560314 0.0854588363055665 GGPLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GGPLSPR 7 0 H9KVB4;O15417;O15417-2;H7C177 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GGPLS(1)PR;GGPLS(1)PR 65.24600000000001 0.025169 22654000.0 2235.0 2048.09 1826.9 2156.04 2753.6000000000004 2134.4 2037.3200000000002 2257.1 2723.2 3125.5 2938.1 True False 2612.21335949625 2152.3290329003144 2085.9818908894185 2684.269896788315 2348.5490876718627 2360.2607912999474 2407.4746725027708 2577.050837078848 2106.399548056807 2419.4473792459758 2208.4886825651984 1.182805861817738 0.9745710040951382 0.9445291286104821 1.2154329419838765 1.0634191183375148 1.068722158249171 1.0901005250823594 1.1668843301861789 0.9537742097958984 1.0955217467701692 1.0 11.10884372394579 -8.784163351367686 24.99984329234201 0.9781711433156923 1.0825390195467384 0.07549679463117875 0.08580566829451276 222.62869763711828 244924.4649180045 0.01334356557849255 0.014210062285498948 1.6437533412846295e-09 8.784163351367686 0.10436787623104604 GGPLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 GGPLSPR 7 0 H9KVB4;O15417;O15417-2;H7C177 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GGPLS(1)PR;GGPLS(1)PR 78.77 0.016623 27638000.0 6676.0 6063.299999999999 6804.6 6019.200000000001 7787.4 6006.1 5534.9 7326.0 6755.1 6616.5 7871.9 True False 7353.742605388555 6574.275570153202 7266.401075383876 6390.992313404956 7240.439889071551 5957.188312916109 5745.533648313496 7179.877182864181 6471.206638493028 6198.733060821047 6903.706204085508 1.0651876525447623 0.9522820606506468 1.0525362552484823 0.9257335298571749 1.0487757843441787 0.8628971362354232 0.8322390145909421 1.0400032925235492 0.9373525534246324 0.8978848284639823 1.0 12.753155354780397 -2.000007174410374 0.7265711659179906 0.9616411683883284 15.021670729867859 0.16079891167014948 0.07127668773538819 484.37908436532183 2.1491163023588027 0.010719044912237751 11124.76864613545 0.009999834804460716 2.000007174410374 14.060029561479531 GGPPS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 GGPPSPTK 8 0 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 GGPPS(0.908)PT(0.092)K;GGPPS(0.612)PT(0.388)K 75.294 0.004866 91634000.0 6795.799999999999 6826.4 6502.6 6411.1 7987.1 6411.6 5276.0 5931.5 8968.9 8360.4 8952.7 True False 7942.7648986418835 7173.83460208814 7424.766458863396 7981.819787805216 6812.208170447391 7090.071256324369 6234.580906349816 6772.308289456905 6937.45847039024 6471.779833450029 6729.4975080499125 1.1802909339279262 1.066028272319992 1.103316622077918 1.1860944711335815 1.0122907635077565 1.0535810805848629 0.9264556378677501 1.0063616609346808 1.0309028961065163 0.9617032810708975 1.0 12.716283067401163 -6.781786216190143 24.87128439843925 1.01035994267407 1.1268954001920346 0.6690734412707668 0.045167272856497034 103.54760160346662 126572.93346952842 0.005960169685125014 0.011273760517081219 1.6527751855481484e-07 6.781786216190143 0.11653545751796468 GGPPS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 GGPPSPTK 8 0 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 GGPPS(0.918)PT(0.082)K;GGPPS(0.984)PT(0.016)K 102.06 0.0022471 181191000.0 19457.2 19049.2 20427.4 19907.6 23355.9 21928.5 19836.3 20543.5 22185.8 21432.0 23664.0 True False 21432.48062036641 20654.542937173206 21813.726203935057 21137.247238560034 21715.462157480844 21749.92156637101 20591.18125133987 20133.74377643601 21253.40797919773 20078.779862391995 20753.478018455466 1.0327175329989087 0.9952328433241754 1.0510877350069585 1.0184918026637892 1.0463529119393826 1.048013328032508 0.9921797798435872 0.9701382948213142 1.0240889724747675 0.967489875409631 1.0 14.341065513575343 -7.764789199860784 24.99912904655414 1.0066066827921603 1.0312206248812459 0.36848777838129154 0.02292785321317376 96.64063683143183 721215.1182637664 0.0032477234159545908 0.004592362214713945 1.718742436964948e-08 7.764789199860784 0.024613942089085628 GGPS(ph)PGDVEAIK ddPTM_A549_PD325901_60min_R1 2 GGPSPGDVEAIK 12 0 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 GGPS(1)PGDVEAIK;GGPS(1)PGDVEAIK 128.68 8.5151e-08 9434900.0 7301.9 7288.7 6586.1 7406.0 9015.5 8309.8 8220.0 9685.4 7731.3 7858.299999999999 8346.3 True False 8043.183512625328 7902.944328694871 7033.072351436636 7863.451799753642 8382.282381786554 8242.127743905403 8532.816598156593 9492.217098950687 7406.380347319977 7362.125596894129 7319.758011554889 1.0988318876018097 1.0796728957732442 0.960833997563076 1.074277563184532 1.1451584012141351 1.1260109597741443 1.1657238647352526 1.2967938399010428 1.0118340436430202 1.005788112840938 1.0 12.837580239004675 -8.952192937291258 24.999988009343635 1.0052202780953285 1.1156942762215187 0.30281711391502397 0.07602695946307572 109.76343461503318 57399.22112313271 0.013962110071588863 0.014860344263194854 1.116367186419437e-09 8.952192937291258 0.11047399812619019 GGQGDPAVPAQQPADPS(ph)T(ph)PERQSSPSGSEQLVR ddPTM_A549_PD325901_60min_R1 1 GGQGDPAVPAQQPADPSTPERQSSPSGSEQLVR 33 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 GGQGDPAVPAQQPADPS(0.728)T(0.708)PERQS(0.248)S(0.231)PS(0.066)GS(0.019)EQLVR 60.348 0.00072064 12097000.0 340.91 370.25 416.51 137.89 418.83 341.01 379.07 213.27 539.17 330.75 306.22 True False 375.5189322353226 401.4522668924879 444.7768732780966 146.40715212908856 389.4128256850602 338.23292762150516 393.4957162850631 209.01616254292156 516.5105599141812 309.866388553852 268.5568812885155 1.3982845288998416 1.4948500480283746 1.6561738099731087 0.5451625422020027 1.4500199131621097 1.2594461404179602 1.4652229888770698 0.7782938256509306 1.923281792058363 1.1538203268787477 1.0 8.069083878215208 -8.761753378667526 24.99999999920043 1.4359941289460958 1.267107950504149 0.002827406533695287 0.3766500714649192 28.17794723962441 2243439.388079059 0.07412639722911382 0.08133660021886491 1.7307989431180388e-09 8.761753378667526 -0.16888617844194687 GGQGDPAVPAQQPADPS(ph)TPERQS(ph)SPSGSEQLVR ddPTM_A549_MK2206_60min_R1 2 GGQGDPAVPAQQPADPSTPERQSSPSGSEQLVR 33 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 GGQGDPAVPAQQPADPS(0.522)T(0.479)PERQS(0.472)S(0.433)PS(0.079)GS(0.015)EQLVR;GGQGDPAVPAQQPADPS(0.486)T(0.486)PERQS(0.43)S(0.431)PS(0.075)GS(0.092)EQLVR 83.436 1.5571e-06 18054800.0 661.26 1121.03 1191.22 1049.54 950.74 855.22 1095.79 954.48 1157.37 1119.4299999999998 1342.8200000000002 True False 772.8645217451865 1178.0856386937292 1360.1529082408974 1306.6773471156403 810.8874054376628 945.7188127509091 1294.8808588644945 1089.7804629724071 895.2275429401101 866.5499855220999 1009.3607340533678 0.7656970354310642 1.167160162811961 1.347538954461629 1.2945593215899287 0.8033672978156379 0.9369482889958609 1.2828722330663107 1.079673922519347 0.8869252713497936 0.8585136674003835 1.0 9.979226154072707 -8.68699280058366 7.420701851468685 0.9467247778897009 1.096168598404172 0.1349545254563269 0.18514945285947748 0.38348110591047124 32.563843425788576 0.031724221604280775 0.035930370338738915 2.0559246773175445e-09 8.68699280058366 0.14944382051447114 GGQGDPAVPAQQPADPS(ph)TPERQSSPSGS(ph)EQLVR ddPTM_A549_PD325901_60min_R1 1 GGQGDPAVPAQQPADPSTPERQSSPSGSEQLVR 33 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 GGQGDPAVPAQQPADPS(0.442)T(0.442)PERQS(0.26)S(0.262)PS(0.285)GS(0.309)EQLVR 41.89 0.015387 11409000.0 310.23 227.31 237.96 319.65 358.97 304.06 184.56 147.01 359.91 0.0 384.38 True False 341.72432122074486 246.46621144451439 254.1093965697244 339.3940545221783 333.75718557927104 301.58383617077163 191.58353179510712 144.07777022288604 344.7842343207394 0.0 337.10369678557777 1.0137068340668662 0.7311287707452364 0.7538018686616667 1.006794223137984 0.99007275435358 0.8946322423826775 0.5683222510519309 0.4273989623867278 1.022783901833171 0.0 1.0 8.39704863823294 GGQGDPAVPAQQPADPST(ph)PER ddPTM_A549_MK2206_60min_R1 3 GGQGDPAVPAQQPADPSTPER 21 0 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPAQQPADPS(0.101)T(0.899)PER;GGQGDPAVPAQQPADPS(0.194)T(0.806)PER;GGQGDPAVPAQQPADPS(0.127)T(0.873)PER 215.62 2.4179999999999995e-67 101828800.0 8091.299999999999 8082.8 8203.0 7259.6 10458.9 7211.7 7461.9 7550.5 12030.5 10059.599999999999 10896.0 True False 9456.91362670784 8494.179995569857 9366.308747586578 9038.202325895823 8920.409664821047 7974.837307260971 8817.630641601918 8620.806497436468 9305.610958760799 7787.129373304377 8190.2224856983785 1.1546589415881356 1.0371122408948283 1.1435963753050495 1.1035356294262058 1.0891535218240662 0.9737021578090816 1.0766045314396657 1.052572932235964 1.13618536920213 0.9507836187481017 1.0 12.999686927572817 -11.043099913711794 1.3407501441966971 0.9999779358058403 1.0880287101768813 0.3745105146792319 0.05225658163385151 0.4561087403916821 1.4610450931430623 0.03616588022902841 0.008076784722699923 9.055242521832769e-12 11.043099913711794 0.08805077437104103 GGQGDPAVPAQQPADPST(ph)PER ddPTM_A549_PD325901_60min_R1 4 GGQGDPAVPAQQPADPSTPER 21 0 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPAQQPADPS(0.101)T(0.899)PER;GGQGDPAVPAQQPADPS(0.185)T(0.815)PER;GGQGDPAVPAQQPADPS(0.053)T(0.947)PER;GGQGDPAVPAQQPADPS(0.023)T(0.977)PER 215.62 2.4179999999999995e-67 124824200.0 10657.2 11372.72 11998.5 9660.380000000001 12783.69 11683.900000000001 12641.3 11211.859999999999 12183.1 11856.500000000002 13296.9 True False 11739.111098584024 12331.139026964313 12812.790362841819 10257.07973228519 11885.80771573633 11588.7501921847 13122.37158908478 10988.230656765982 11671.086674871494 11107.878566557052 11661.46559599394 1.006658297102618 1.0574261807367014 1.0987289939991243 0.879570380571101 1.0192379009221155 0.9937644712655826 1.125276362654854 0.9422684109740689 1.0008250317079237 0.9525285201178263 1.0 13.509461495291887 GGQGDPAVPAQQPADPST(ph)PERQS(ph)SPSGSEQLVR ddPTM_A549_PD325901_60min_R1 1 GGQGDPAVPAQQPADPSTPERQSSPSGSEQLVR 33 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 GGQGDPAVPAQQPADPS(0.48)T(0.515)PERQS(0.434)S(0.403)PS(0.111)GS(0.058)EQLVR 57.385 0.0015884 13718000.0 1348.1 1442.7 1641.9 1732.0 1105.0 1095.2 1372.3 1443.0 1536.3 1820.3 1502.8 True False 1484.9581195812323 1564.28139215609 1753.3292075467746 1838.9817063426012 1027.388612043052 1086.2810543124024 1424.5236274513736 1414.218232988399 1471.7346536271616 1705.3659473456596 1317.9651270340971 1.1267051677785513 1.186891337312008 1.3303305008474735 1.3953189417697125 0.7795264009413144 0.824210771613458 1.0808507738418482 1.07303160302193 1.116671923588071 1.293938596981967 1.0 10.364096482230684 -6.743533172492539 24.997039860688623 1.0259816312955377 1.2596399433496113 0.3770499474077482 0.14577282781887121 188.4623822539284 263091.84875544853 0.01886513450273147 0.039206521677560745 1.8049568647721903e-07 6.743533172492539 0.2336583120540736 GGQGDPAVPAQQPADPST(ph)PERQSS(ph)PSGSEQLVR ddPTM_A549_MK2206_60min_R1 1 GGQGDPAVPAQQPADPSTPERQSSPSGSEQLVR 33 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 GGQGDPAVPAQQPADPS(0.479)T(0.518)PERQS(0.165)S(0.657)PS(0.147)GS(0.034)EQLVR 76.358 8.857e-06 11263000.0 264.18 376.2 319.27 333.51 486.0 429.73 416.2 325.74 451.59 583.54 634.02 True False 308.7671254191138 395.3469731198814 364.54728682701017 415.21996497183284 414.5100438003069 475.2037433683123 491.8181526199387 371.91464253691214 349.30558604104505 451.71790871386855 476.5753359381867 0.647887337290073 0.8295581900846819 0.7649310808528561 0.8712577711442628 0.8697681406116035 0.9971219816334509 1.0319840653351164 0.7803900338332881 0.7329493570064882 0.9478415575674226 1.0 8.896560479866901 -4.395612560510951 0.7731709125710486 0.8838229041960153 6.071916180610084e-12 0.38287641634272074 0.09275027539448669 9.032965814944026 1.4603987780971126 0.018456107014411614 9.483642016441257 4.0214941334333946e-05 4.395612560510951 -0.8838229041899434 GGQGDPAVPAQQPADPST(ph)PERQSSPSGSEQLVR ddPTM_A549_MK2206_60min_R1 2 GGQGDPAVPAQQPADPSTPERQSSPSGSEQLVR 33 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPAQQPADPS(0.159)T(0.836)PERQS(0.002)S(0.002)PSGSEQLVR;GGQGDPAVPAQQPADPS(0.048)T(0.947)PERQS(0.004)S(0.001)PSGSEQLVR 106.19 1.3381999999999999e-14 23512000.0 1128.42 1038.73 992.6200000000001 1023.84 1358.74 831.0899999999999 616.92 730.8199999999999 2003.11 1735.06 1690.95 True False 1318.8697087797586 1091.5969202254514 1133.3884419150784 1274.6808459619242 1158.8711459119938 919.0353921671065 729.0063784581749 834.4159730423836 1549.408783309369 1343.1087409484967 1271.0404471541544 1.037630007552233 0.8588215447191511 0.8917013179657048 1.0028641093333581 0.9117500143340785 0.7230575503909545 0.5735508890298591 0.656482628000259 1.2190082438198393 1.0567002363738325 1.0 10.311794225296266 -8.76907192050854 24.99999663274184 1.1034205608701508 0.8309773163577167 0.40290740459935825 0.14072541364472832 133.60832524169825 437625.96472540306 0.02805746068071655 0.03014653411173894 1.7018766490238852e-09 8.76907192050854 -0.2724432445124342 GGQGDPAVPAQQPADPST(ph)PERQSSPSGSEQLVR ddPTM_A549_PD325901_60min_R1 2 GGQGDPAVPAQQPADPSTPERQSSPSGSEQLVR 33 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPAQQPADPS(0.034)T(0.954)PERQS(0.007)S(0.001)PS(0.002)GS(0.002)EQLVR;GGQGDPAVPAQQPADPS(0.165)T(0.829)PERQS(0.002)S(0.002)PSGS(0.001)EQLVR 121.92 1.3398e-21 35990000.0 2114.3 2163.3 2128.3 2290.7 2199.7200000000003 3215.7 2224.84 2499.2 2135.71 2416.7 2562.3 True False 2328.9421795346057 2345.6088831020106 2272.739236507584 2432.191336442838 2045.219255822031 3189.512405361936 2309.5075036791636 2449.3514954155266 2045.9535358315866 2264.109149563397 2247.1533437579615 1.0363966420021284 1.0438134494103548 1.0113859131245733 1.0823432869852279 0.910137824596237 1.4193568116842654 1.0277480662787908 1.0899796857296018 0.9104645846776508 1.0075454600606293 1.0 11.13388286077349 -8.750719595550388 24.797477255935597 0.9577193870472979 1.0786090277013758 0.12657071434311395 0.12106968513131348 240.8966947576147 557252.3679874674 0.019771200881389922 0.022306158575741468 1.7753353652702003e-09 8.750719595550388 0.12088964065407792 GGQGDPAVPTQQPADPS(ph)TPEQQNSPSGSEQFVR ddPTM_A549_MK2206_60min_R1 1 GGQGDPAVPTQQPADPSTPEQQNSPSGSEQFVR 33 0 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPT(0.005)QQPADPS(0.497)T(0.497)PEQQNSPSGSEQFVR 70.268 0.0001035 3964900.0 595.05 519.53 700.69 751.15 769.97 744.56 611.83 532.87 1170.9 1033.0 1071.7 True False 695.4798924242698 545.9718579079532 800.0583781965668 935.1817837204047 656.7084329730917 823.3488450010723 722.9915913442024 608.4059543459334 905.6930195430808 799.6445825503422 805.5673125847054 0.8633417488015814 0.6777482767469469 0.9931614226370942 1.1608983744881907 0.8152123636521545 1.0220733042895123 0.8974937041877303 0.755251541170198 1.124292167015959 0.9926477527801373 1.0 9.653861334230776 -2.971747777698807 0.2557706806873084 1.046487546627286 8.478904192124147e-11 0.07233077971935298 0.13766618236377148 32.59786910790255 0.6178705336216933 0.0664623846239135 13.572286636441737 0.0010672157410337698 2.971747777698807 -1.046487546542497 GGQGDPAVPTQQPADPSTPEQQNS(ph)PSGSEQFVR ddPTM_A549_MK2206_60min_R1 1 GGQGDPAVPTQQPADPSTPEQQNSPSGSEQFVR 33 0 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPT(0.119)QQPADPS(0.098)T(0.098)PEQQNS(0.617)PS(0.04)GS(0.027)EQFVR 47.251999999999995 0.0028777 7215300.0 450.19 375.68 405.19 451.38 514.58 221.07 184.19 439.79 633.2 804.21 814.1 True False 526.171065911238 394.800507340981 462.65203479636773 561.9681202632183 438.8859636600044 244.46348066561052 217.65493880602227 502.1315793003886 489.7812110126214 622.5384024518983 611.9365019830256 0.8598458568922457 0.6451658073372004 0.7560458205992118 0.9183438452226972 0.717208341450072 0.39949158102745713 0.35568222863106763 0.8205615740737707 0.8003791397072231 1.0173251643504129 1.0 9.257238148204205 -9.472435155557655 0.9796810399329636 0.9588528844932857 0.6781789079421264 0.3442307161385304 0.16777799795235926 0.42659450223039086 0.8618522373715952 0.0515416871762475 0.0374668746150978 3.369495218671208e-10 9.472435155557655 -0.2806739765511592 GGQRVS(ph)DNIKK ddPTM_A549_MK2206_60min_R1 2 GGQRVSDNIKK 11 2 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 GGQRVS(1)DNIKK;GGQRVS(1)DNIKK 59.306000000000004 0.0019977 10985100.0 2169.1 2762.7 3020.1 2936.2 4384.8 3591.2 3150.9 4006.7 6047.5 5394.2 5920.1 True False 2535.191050596563 2903.309629554219 3448.3955929033536 3655.5691318110285 3739.8017285094384 3971.21840035437 3723.377744089772 4574.6619950041295 4677.750905873072 4175.646473565399 4449.975783552031 0.569708954364902 0.6524326807092774 0.7749245750166301 0.8214806798101502 0.8404094562340018 0.8924134857166547 0.8367186531333708 1.0280195258394356 1.0511856992936774 0.9383526285692146 1.0 12.119581769719897 -5.60756736290952 0.35973919550973216 1.0342870253961896 0.31318745627714234 0.864073942773822 0.053114360151742056 1.0642499535448944 0.11076206199882013 0.015620829417606846 0.3176234739484942 2.4684971894961127e-06 5.60756736290952 -0.7210995691190472 down GGQRVS(ph)DNIKK ddPTM_A549_PD325901_60min_R1 2 GGQRVSDNIKK 11 2 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 GGQRVS(1)DNIKK;GGQRVS(1)DNIKK 89.01299999999999 6.2262e-05 18973900.0 6232.9 6662.9 6828.3 7478.5 7648.799999999999 8029.5 7153.6 7880.5 7790.0 7644.0 8210.6 True False 6865.6594195815305 7224.405966449581 7291.7094999035535 7940.429960094198 7111.574674927511 7964.110414172242 7425.834162600123 7723.317245367349 7462.613390454718 7161.356535466797 7200.748251281714 0.9534647206086481 1.003285452336659 1.012632193967571 1.1027228953158892 0.9876160680470492 1.106011505506341 1.0312586836067132 1.072571485052629 1.036366378886582 0.9945294968744526 1.0 12.813931113762116 -5.385724452737307 1.9909249917372134 1.0315984406557794 0.9425912851750993 0.2870358078422597 0.039167639020111 0.592874875450887 3.0270219110898 0.005352775360519139 0.08699327636222472 4.114106664596145e-06 5.385724452737307 -0.08900715548068017 GGQTVPGQAPLCFDPGS(ph)PASDKTEGK ddPTM_A549_MK2206_60min_R1 2 GGQTVPGQAPLCFDPGSPASDKTEGK 26 1 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B 1 GGQT(0.004)VPGQAPLCFDPGS(0.775)PAS(0.177)DKT(0.044)EGK;GGQTVPGQAPLCFDPGS(0.964)PAS(0.017)DKT(0.019)EGK 75.141 1.9216999999999997e-06 4492700.0 1704.97 1972.38 2240.7 1624.0900000000001 2658.2 1715.3200000000002 1304.8899999999999 1610.42 2971.0 2320.0 2497.6 True False 1992.727253485603 2072.76571728387 2558.4649531533873 2021.9921229081704 2267.1823012962477 1896.8340238627372 1541.9716222302525 1838.7019667044087 2298.073243712095 1795.9103886900227 1877.37698974672 1.0614422486100914 1.1040753820912177 1.3627869986296965 1.0770304174128398 1.2076329440908493 1.0103639461984895 0.8213436249893967 0.9793994369519097 1.2240872537923946 0.9566061576861619 1.0 10.874502666651292 -7.255723826222392 24.786383979258297 1.068075722158291 1.165710930377523 0.20066866419299012 0.12670717735213283 821.3142073511447 3561753.569742393 0.021189428575257862 0.036057273455119394 5.54978519169915e-08 7.255723826222392 0.097635208219232 GGQTVPGQAPLCFDPGS(ph)PASDKTEGK ddPTM_A549_PD325901_60min_R1 2 GGQTVPGQAPLCFDPGSPASDKTEGK 26 1 Q96KM6 Q96KM6 ZNF512B Zinc finger protein 512B 1 GGQTVPGQAPLCFDPGS(0.927)PAS(0.066)DKT(0.007)EGK;GGQTVPGQAPLCFDPGS(0.948)PAS(0.04)DKT(0.012)EGK 76.063 1.77e-06 7315200.0 3103.0 3449.5 3168.2 3216.9 3292.4 2988.8 3735.4 3899.8999999999996 3193.3 3416.1000000000004 3819.1000000000004 True False 3418.014275692134 3740.2014710213048 3383.2131039342785 3415.6006068900188 3061.1531821633894 2964.4602037334816 3877.5526910893122 3822.1134350876328 3059.0967059998816 3200.406863004725 3349.374911269575 1.0204931864126674 1.1166864176466849 1.0101028381596961 1.0197725537973117 0.9139476061230375 0.8850786437072248 1.1576944336815171 1.1411423135186938 0.9133336180751219 0.9555236268822519 1.0 11.709676157379302 -4.056806134241667 0.32145624076500423 0.9728642655719061 1.2525677833810096 0.013646238964755142 0.08872512361653331 28.045066232916 1.1127768588479592 0.03031551690931332 3.594018243847311 8.77392395040835e-05 4.056806134241667 0.2797035178091035 GGREDMDIS(ph)K ddPTM_A549_MK2206_60min_R1 3 GGREDMDISK 10 1 P49321-4;P49321;P49321-3;E9PPR5;E9PNB5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 GGREDMDIS(1)K;GGREDMDIS(1)K;GGREDMDIS(1)K 61.641000000000005 0.0020691 15346100.0 2961.65 3355.74 2820.92 2449.97 4385.9 4246.799999999999 3277.83 3493.9100000000003 5908.5 4310.5 4468.2 True False 3461.5041146094263 3526.5328324755747 3220.96887385614 3050.2127599833334 3740.739919966599 4696.193557202309 3873.36928208124 3989.1824421506158 4570.2341839356795 3336.7550562277356 3358.6226239535113 1.0306320483647582 1.0499937704595144 0.9590148208031375 0.9081737073493712 1.113772024665066 1.3982498431676473 1.1532612370489568 1.1877435749107348 1.3607465606111926 0.9934891262954589 1.0 11.713653987606833 -6.979296621544885 9.902199883664935 1.1912750943626522 0.9919304379842717 0.36019921271717814 0.12124059742980176 0.31775658284572217 143.5764290822709 0.020954386729566035 0.03941920870973537 1.0488258397486521e-07 6.979296621544885 -0.1993446563783805 GGRS(ph)PDEVTLTSIVPTR ddPTM_A549_MK2206_60min_R1 2 GGRSPDEVTLTSIVPTR 17 1 A0A0C4DGG1;Q9UKS6;H0YDM6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR 148.57 4.357e-17 34541000.0 4582.5 4669.9 4349.3 3858.0 6320.1 5184.2 5162.2 4719.9 6339.0 6174.7 6737.4 True False 5355.913968631575 4907.577963244378 4966.09613993396 4803.2101731922 5390.421662185842 5732.788603006552 6100.104919400878 5388.960279087525 4903.226621302918 4779.830981484606 5064.3176372195485 1.0575786023508826 0.9690501889488068 0.9806051862616748 0.9484417284357576 1.064392490425489 1.131996255699714 1.2045265238832858 1.0641039257652516 0.9681909731070751 0.943825273982788 1.0 12.306152179015657 -4.440641171834098 16.390173461715708 1.0154799778103396 1.024379292531082 0.0 0.08052105061072054 0.0 0.0 0.011330542983263135 0.0 3.6254241899195684e-05 4.440641171834098 0.008899314720742346 GGRS(ph)PDEVTLTSIVPTR ddPTM_A549_PD325901_60min_R1 2 GGRSPDEVTLTSIVPTR 17 1 A0A0C4DGG1;Q9UKS6;H0YDM6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR 161.68 5.905100000000001e-23 64887000.0 2419.6 2321.85 2521.34 2862.3 3119.2 2440.88 2187.66 2868.3999999999996 2889.0 3516.1 2900.7 True False 2665.236010784623 2517.5204480332827 2692.4532944491034 3039.0977702450496 2900.118152655827 2421.002282551186 2270.912598433485 2811.1875117837326 2767.5853767681233 3294.092845938619 2543.932289052306 1.0476835496975851 0.9896177106864498 1.05838245225156 1.1946457000147628 1.1400138931119945 0.9516771704065617 0.892678082748606 1.105055949752101 1.0879162895483885 1.2948822813070122 1.0 11.31284455609077 -7.245601327967103 24.53445865483571 1.0297595975131426 1.0852042013146288 0.0 0.10927910615564446 1273.5396404967555 1972816.5971898322 0.012200332802868792 0.021086359150993033 5.6806583709668175e-08 7.245601327967103 0.05544460380148619 GGRT(ph)PPQQGGR ddPTM_A549_MK2206_60min_R1 3 GGRTPPQQGGR 11 1 A0A2R8Y4Z8;Q9Y3X0;M0QYB4 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 GGRT(1)PPQQGGR;GGRT(1)PPQQGGR;GGRT(1)PPQQGGR 96.059 0.00011206 190928000.0 3389.71 3859.75 3020.6400000000003 3527.39 5028.16 4020.9999999999995 3157.3300000000004 3567.44 4992.99 5278.759999999999 5885.889999999999 True False 3961.8101775472182 4056.1947886748108 3449.012173023271 4391.600708350553 4288.524324763275 4446.49955107622 3730.975991858508 4073.1355448267987 3862.085737166626 4086.2844497419583 4424.2610706999985 0.8954738687968945 0.9168072868794442 0.7795679590123226 0.9926178944172753 0.9693199059079831 1.005026484653787 0.8432992385027134 0.9206363457621082 0.8729335080932676 0.9236083459910818 1.0 12.111220804568179 -10.938836300621038 1.1847336291359374 1.0002432830392471 0.9087195547259481 0.03930053228996999 0.06593623929143837 0.597636741636606 1.4842252359219101 0.04465734095973779 0.010352428875129174 1.1512342439103509e-11 10.938836300621038 -0.09152372831329902 GGRT(ph)PPQQGGR ddPTM_A549_PD325901_60min_R1 4 GGRTPPQQGGR 11 1 A0A2R8Y4Z8;Q9Y3X0;M0QYB4 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 GGRT(1)PPQQGGR;GGRT(1)PPQQGGR;GGRT(1)PPQQGGR;GGRT(1)PPQQGGR 132.97 2.7818e-08 230391000.0 6056.220000000001 6182.47 6193.7 6736.08 7442.66 7587.049999999999 7902.67 8084.43 6912.35 6802.74 7525.880000000001 True False 6671.042996046474 6703.488444280353 6614.04172774375 7152.152362852347 6919.913237383116 7525.2635802784125 8203.410431356957 7923.179701537359 6621.847967844633 6373.213835437128 6600.244470484006 1.0107266520019185 1.0156424469211782 1.0020904160931379 1.083619310593183 1.048432867650381 1.1401492193101406 1.2428949363985282 1.200437307582993 1.003273135935682 0.9656026930423337 1.0 12.688303746985143 -8.932660085443974 24.99900077549175 1.0014426680019972 1.0927664608543421 0.2742013026771385 0.07423133899626179 61.78861522007721 22937.594129312405 0.014168128854916109 0.015083054022583317 1.16772321564892e-09 8.932660085443974 0.09132379285234493 GGS(ph)DDSSKDPIDVNYEK ddPTM_A549_PD325901_60min_R1 2 GGSDDSSKDPIDVNYEK 17 1 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 1 GGS(1)DDSSKDPIDVNYEK;GGS(1)DDSSKDPIDVNYEK 182.39 1.0255999999999998e-39 40173000.0 14801.7 17364.0 16120.0 16821.6 18185.8 17484.4 16774.0 17805.6 17380.9 19085.4 18989.6 True False 16304.357687564372 18827.325218963302 17214.000137434676 17860.632027374544 16908.492145604105 17342.012843334353 17412.343749085 17450.453339777017 16650.441216707888 17880.344586865263 16653.999584992463 0.9790055298342167 1.130498720315167 1.0336255894317932 1.0724530126366414 1.015281167704662 1.0413121937964909 1.04553525777531 1.0478235723929203 0.9997863355125947 1.0736366658119714 1.0 14.023581072671947 -8.761330227344736 21.923276510690936 0.9998991009965988 1.0478437052597005 0.0 0.04147713387545506 0.5282639788511004 105826.9216504588 0.005373991952623936 0.005905609566161233 1.7324861549242729e-09 8.761330227344736 0.04794460426310165 GGS(ph)DGTPRGS(ph)PSPASVSSGR ddPTM_A549_MK2206_60min_R1 1 GGSDGTPRGSPSPASVSSGR 20 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 2 GGS(0.592)DGT(0.404)PRGS(0.712)PS(0.183)PAS(0.049)VS(0.03)S(0.029)GR 40.625 0.02712 19024000.0 629.6 603.33 555.75 277.11 557.4 412.79 397.4 376.89 647.44 745.09 818.73 True False 735.8610877578697 634.0369199692135 634.5637067501203 345.0019624399405 475.4071983833148 456.4711638121745 469.6024359710802 430.31531167721755 500.7958737492288 576.7736515125209 615.4167452015258 1.195711838352567 1.0302562042922478 1.0311121881194907 0.560598919561354 0.7724963646019037 0.7417269149260756 0.7630641181485939 0.6992258742265869 0.813750808137723 0.9372082511723812 1.0 9.265419889036904 -6.02042329714503 23.973555029926995 0.8418461219272851 1.092409217994765 0.5068493549255955 0.1242836683675814 361.5260601421102 424373.6433061271 0.02064437734351514 0.05542974747892913 9.540622295204624e-07 6.02042329714503 0.25056309606747995 GGS(ph)DGYGSGR ddPTM_A549_MK2206_60min_R1 1 GGSDGYGSGR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGS(0.999)DGYGS(0.001)GR 174.87 1.0937e-10 57854000.0 4656.6 4387.1 4583.9 3730.4 5510.3 4448.2 4860.2 4095.9 6458.3 6363.7 6517.5 True False 5442.52023706051 4610.384651180844 5233.96594758772 4644.348167464019 4699.742169450273 4918.905571523812 5743.2354285522 4676.506368167673 4995.505361785873 4926.135750218405 4899.024876150801 1.1109394980939018 0.9410821066912517 1.0683689264505398 0.9480148161878934 0.9593219647300288 1.0040580923501314 1.1723221607857401 0.954579020599307 1.0196938141924434 1.0055339327219144 1.0 12.258278901983664 -5.231416710230622 23.627013576143245 1.0094436727420444 1.1109398184958812 0.1802222865878047 0.06339576404813871 7184.165080397758 5653552.820413163 0.007912840646798844 1.1771243325569323 5.8692592052439065e-06 5.231416710230622 0.10149614575383681 GGS(ph)DGYGSGR ddPTM_A549_PD325901_60min_R1 2 GGSDGYGSGR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGS(1)DGYGSGR;GGS(1)DGYGSGR 209.8 3.2101e-26 172799000.0 11439.8 11502.4 11720.6 10468.7 13584.6 12323.5 13476.1 12091.8 13474.6 12396.2 14750.8 True False 12601.160074464346 12471.747615676311 12516.030397693361 11115.327822857274 12630.464560325832 12223.141501843407 13988.940359904882 11850.6195631664 12908.309421183725 11613.50181645127 12936.545113025393 0.9740746052650983 0.9640709715547552 0.967494047934898 0.8592191907301129 0.9763398534906064 0.9448536216625811 1.0813505644424233 0.9160575300150571 0.9978173699705002 0.8977282353971004 1.0 13.659164756244929 -7.621127674472671 20.511622866736378 0.9977228488445335 0.9465629806209755 0.02226294653219718 0.055341007910597366 4.16034307272666 859.5101105777386 0.006586110955485158 0.009768779320726463 2.3926122696492476e-08 7.621127674472671 -0.051159868223558 GGS(ph)FGGR ddPTM_A549_MK2206_60min_R1 2 GGSFGGR 7 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 GGS(1)FGGR;GGS(1)FGGR 71.877 0.018431 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GGS(ph)FGGR ddPTM_A549_PD325901_60min_R1 1 GGSFGGR 7 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 GGS(1)FGGR 55.531000000000006 0.045711 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GGS(ph)GATLEDLDR ddPTM_A549_MK2206_60min_R1 1 GGSGATLEDLDR 12 0 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 GGS(0.995)GAT(0.005)LEDLDR 65.395 0.0059119 993320.0 462.45 508.95 356.84 398.81 534.03 383.22 350.85 310.3 436.33 501.19 491.3 True False 540.5002541830161 534.853381098787 407.44527776286645 496.51846790326096 455.4748944252632 423.77208603915176 414.5949035240397 354.28597525389534 337.5019516758326 387.97083090842784 369.2966508098027 1.46359370711268 1.448302820851333 1.1033007661169159 1.344497619500429 1.233357771933449 1.147511316741958 1.1226608814753827 0.9593533395902952 0.9139047184309689 1.0505668818216356 1.0 8.5286363684244 -7.173264677522894 0.6122006072883137 0.9525052257996174 1.4085165052940967 0.7351263390507163 0.09282092687164815 0.2995198735476727 0.20776429168837945 0.019237265298650053 0.06270769563946887 6.710197803005065e-08 7.173264677522894 0.4560112794944793 GGS(ph)GATLEDLDR ddPTM_A549_PD325901_60min_R1 1 GGSGATLEDLDR 12 0 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 GGS(0.977)GAT(0.023)LEDLDR 60.49 0.0086852 1050500.0 378.54 509.1 420.66 453.91 302.27 357.32 274.94 438.07 386.95 429.28 515.2 True False 416.9691021335803 552.0036436866054 449.20851723407424 481.9469897955949 281.0395979748899 354.41010438906864 285.4029921529409 429.3323501907333 370.68783715487234 402.17518753861685 451.8336661218835 0.9228376134794295 1.2216965779121487 0.9941900104294108 1.0666469232631024 0.6219979143809055 0.7843818001234673 0.6316549950838604 0.9502000014202563 0.8204077406106304 0.8900956650497329 1.0 8.819647959703529 GGS(ph)GGGGEGIQDR ddPTM_A549_MK2206_60min_R1 2 GGSGGGGEGIQDR 13 0 O43823 O43823 AKAP8 A-kinase anchor protein 8 1 GGS(1)GGGGEGIQDR;GGS(1)GGGGEGIQDR 104.55 0.00011185 8347500.0 1984.93 2020.3899999999999 1521.24 1707.54 1943.39 1423.78 1170.2399999999998 1527.76 2454.8 2513.6 2376.7 True False 2319.937657120759 2123.2192212165796 1736.9747067144465 2125.8873766543843 1657.5199053931667 1574.4434545713266 1382.8574601680843 1744.3246585687755 1898.7917195100802 1945.776014228983 1786.4997964169718 1.2985938547396745 1.1884799681897176 0.9722781442226562 1.1899734782607267 0.9278030194671788 0.8813006627423365 0.7740596796828983 0.9763923074982805 1.0628558275339983 1.089155463734985 1.0 10.802920034180993 -5.3029350823223425 1.0819208859311276 0.9957680398319023 1.45062792664844 0.4784206995078105 0.10499863860974587 1.173978959729993 1.1314567616252127 0.016234920381823777 0.5988322599820427 4.9781149152121816e-06 5.3029350823223425 0.4548598868165378 GGS(ph)GGGGEGIQDR ddPTM_A549_PD325901_60min_R1 2 GGSGGGGEGIQDR 13 0 O43823 O43823 AKAP8 A-kinase anchor protein 8 1 GGS(1)GGGGEGIQDR;GGS(1)GGGGEGIQDR 98.94200000000001 0.00015873 10057700.0 1638.75 1879.1100000000001 1426.54 1409.15 1826.19 1757.04 1861.08 2004.43 1804.3200000000002 1630.1799999999998 2222.61 True False 1805.1146936160117 2037.4691944371175 1523.3535828818908 1496.1899950881505 1697.9247144134863 1742.7312487847557 1931.9044178220518 1964.4500712050833 1728.4907050918189 1527.2501565917412 1949.2430602856375 0.926059315225416 1.0452617408003246 0.7815103277364815 0.7675748733300106 0.871068749201896 0.8940553819539467 0.9911049356456116 1.0078014954775405 0.8867497031583788 0.7835093466321955 1.0 10.92869828290539 -7.612078901945938 6.182107225570094 0.9536699156218578 0.8766622251771884 0.05980111808743083 0.09134628500713846 0.3059312074246176 17.374707987115865 0.012937440060444208 0.019256847398114188 2.4429866743546384e-08 7.612078901945938 -0.07700769044466937 GGS(ph)GGGGGGGGGGYNR ddPTM_A549_PD325901_60min_R1 2 GGSGGGGGGGGGGYNR 16 0 H3BPE7;P35637-2;P35637;H3BNZ4 H3BPE7 FUS RNA-binding protein FUS 1 GGS(1)GGGGGGGGGGYNR;GGS(1)GGGGGGGGGGYNR 101.3 1.2303e-06 20697200.0 1118.12 1229.0900000000001 1003.31 759.69 1117.6 1100.1100000000001 1083.41 964.43 1207.42 1176.16 1467.03 True False 1231.63071928356 1332.6697277917297 1071.4006499931506 806.6143259188291 1039.1036315106921 1091.1510689003076 1124.6397604147 945.193687069301 1156.6763363161547 1101.8970568752786 1286.594610269384 0.9572795575645107 1.03581168237033 0.8327414411978793 0.6269374358329872 0.8076387256846406 0.8480923673944546 0.8741213055285734 0.7346476345578649 0.8990215931916368 0.8564446392671939 1.0 10.329341834814073 -9.650565458215386 1.0201919322037039 0.9821475944983241 0.8403369915047258 0.03983132320878624 0.10869462665007334 0.5005686519486834 1.081432838274289 0.03272682303799426 0.02183668155594551 2.2358081853600974e-10 9.650565458215386 -0.14181060299359827 GGS(ph)GSGPTIEEVD ddPTM_A549_MK2206_60min_R1 1 GGSGSGPTIEEVD 13 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 1 GGS(0.974)GS(0.026)GPTIEEVD 190.53 1.3742e-25 10568000.0 833.07 1138.5 624.62 591.73 1326.3 787.4 518.66 1153.8 1295.3 972.9 967.85 True False 973.6718493939778 1196.4447870733259 713.200508340549 736.703876563769 1131.203026938986 870.7221453661815 612.893808356216 1317.3546833643054 1001.9166181690593 753.1212142916047 727.506133698896 1.3383692649345638 1.644583779644828 0.9803360759508486 1.0126428389244067 1.554905140369819 1.19685883738069 0.842458613015466 1.8107815485574161 1.3771933620338903 1.0352094359156434 1.0 9.506815601396575 -10.777303369129118 1.1173565605573181 1.006098453689698 1.3058315148499817 0.1362725641330852 0.27931193754844896 0.7669138443775577 1.7530079374526946 0.17006774854440376 0.04670746616334953 1.6699237095872618e-11 10.777303369129118 0.29973306116028375 GGS(ph)GSGPTIEEVD ddPTM_A549_PD325901_60min_R1 1 GGSGSGPTIEEVD 13 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 1 GGS(0.993)GS(0.007)GPTIEEVD 204.69 6.5401e-31 14094000.0 687.19 625.81 701.68 736.16 993.99 980.88 508.0 800.81 804.3 782.99 849.32 True False 756.9530229174597 678.5492049803859 749.3002243446136 781.6309312593363 924.1755714793427 972.892038489727 527.3322179882662 784.8372163267084 770.4980680285922 733.5518777740906 744.8590242830714 1.0162366276571984 0.9109766853311485 1.0059624706377384 1.0493676061878392 1.2407389067600596 1.306142513915486 0.7079624476535337 1.053672159080191 1.0344213373399058 0.9848197495897106 1.0 9.540823589559848 GGS(ph)GSHNWGTVK ddPTM_A549_MK2206_60min_R1 1 GGSGSHNWGTVK 12 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GGS(0.656)GS(0.344)HNWGTVK 49.216 0.009733499999999999 2500600.0 1492.2 1429.0 1297.6 1595.4 2297.1 1939.3 1491.0 1945.1 2381.3 2387.7 2513.8 True False 1744.046879212665 1501.7299962475033 1481.6191918649693 1986.2730716202286 1959.1996329499702 2144.515438796845 1761.8954001833938 2220.8238816189228 1841.939352154698 1848.3169116703314 1889.5540826494662 0.9229938932296788 0.7947536458664525 0.7841104975346855 1.0511861448470141 1.036858193655325 1.1349320236390805 0.9324397837361321 1.175316389200653 0.9748010755913351 0.9781762420256775 1.0 10.883830096540493 -6.263200983804226 24.98748404002657 1.0146100611730515 0.8300327711680329 0.570638878309546 0.07628268342494271 86.72975271661367 1230229.4593031383 0.010396114838806455 0.025383534818912964 5.455053524395471e-07 6.263200983804226 -0.18457729000501866 GGS(ph)GYHS(ph)RS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 GGSGYHSRSPAR 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 GGS(0.979)GY(0.04)HS(0.99)RS(0.991)PAR 41.553999999999995 0.022165 49480000.0 1095.0 1629.9 1245.8 942.37 1670.6 1111.8 1054.0 825.09 1318.8 1951.3 1894.1 True False 1279.8092298203105 1712.8549481342245 1422.4731729542061 1173.2506923045971 1424.8569530304383 1229.4499380468899 1245.498156803015 942.0490342321509 1020.0939056908477 1510.4999747632937 1423.7426954993834 0.8989048610159242 1.2030649593839944 0.9991083202398927 0.8240609037106067 1.0007826256349388 0.8635337985812496 0.8748056518500006 0.6616708462913121 0.7164875429496379 1.0609360662837184 1.0 10.475472724878987 -6.125076470728227 4.476778474939552 0.8568525805222417 1.0614946042241824 0.2185751365001084 0.13116427759915297 0.22339183441970828 7.109212494023112 0.019126650960225235 0.0534795815558452 7.497621793152526e-07 6.125076470728227 0.20464202370194073 GGS(ph)GYHS(ph)RS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 GGSGYHSRSPAR 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 GGS(0.983)GY(0.066)HS(0.962)RS(0.99)PAR;GGS(0.855)GY(0.159)HS(0.993)RS(0.993)PAR 50.653 0.0067985 187913000.0 3360.8 3405.5 3913.7 3385.0 3903.8 2772.0 3249.1000000000004 3214.8999999999996 3413.0 4014.7 3770.6 True False 3701.9859419098025 3692.4934366032903 4179.307216989956 3594.083762107219 3629.610555378883 2749.4257510536713 3372.7462784757413 3150.776297459741 3269.563479027208 3761.211156847013 3306.8401038027446 1.1194934819051743 1.1166229151379465 1.2638371030349809 1.0868634857712518 1.0976069121712186 0.8314359523739696 1.019930257467607 0.9528057597452214 0.9887274184401387 1.1374033938084152 1.0 11.691237573000961 -6.927143364774325 3.0199956416701546 0.9826403547193944 1.1546338917691867 0.45639839928193593 0.08023037670345261 0.1266687979148955 2.343392022436161 0.008982872448873847 0.01784620974710518 1.1826510868119374e-07 6.927143364774325 0.17199353704979237 GGS(ph)GYHS(ph)RSPAR ddPTM_A549_MK2206_60min_R1 1 GGSGYHSRSPAR 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GGS(0.997)GY(0.005)HS(0.652)RS(0.345)PAR 62.104 0.002262 32764000.0 2920.5 2524.8 1839.8 1776.2 2645.3 2159.8 1841.0 1914.3 2545.3 3738.9 3980.6 True False 3413.409000630336 2653.301535707276 2100.7113048652654 2211.3690797366494 2256.17987420772 2388.348602440791 2175.4858697100103 2185.6578872978785 1968.7936140088848 2894.2798932211763 2992.107161028904 1.1408043953400913 0.8867668813020981 0.7020842475918837 0.7390674734310718 0.7540438068507818 0.7982162649614137 0.727074851477552 0.7304744682160014 0.6579956893428477 0.9673048916556559 1.0 11.546946130314263 -5.320182268912522 3.2824577113599824 0.7989739557021415 1.1674481502200562 0.5003866713449607 0.10198713155513443 0.2316264087255033 4.043892865375751 0.018095190233216315 0.19638311415972565 4.784292583588459e-06 5.320182268912522 0.36847419451791474 GGS(ph)GYHSR ddPTM_A549_MK2206_60min_R1 2 GGSGYHSR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GGS(0.935)GY(0.063)HS(0.002)R;GGS(0.993)GY(0.006)HS(0.001)R 42.802 0.023231 20996600.0 759.99 749.88 554.62 440.47 1447.51 992.0699999999999 842.5300000000001 1003.36 1427.29 964.0899999999999 1164.9 True False 888.2577320284363 788.0456890035539 633.2734557584378 548.3851697734498 1234.5831965049022 1097.0501889172306 995.6067951150333 1145.589352661128 1104.011093913778 746.3013994104155 875.6231803955613 1.0144292110073734 0.899982671367329 0.7232260062740202 0.6262798679287107 1.4099480508809523 1.2528793360879733 1.1370265399612531 1.3083131857514438 1.2608289942884368 0.8523088654108895 1.0 9.774166337303017 -6.756149666460784 24.99995301219076 1.1676469674958332 0.8153544394492217 0.5100278221458804 0.16894199079662917 82.3399897006996 389146.35408879316 0.02337539247824062 0.04755003214764933 1.7532761840973767e-07 6.756149666460784 -0.3522925280466115 GGS(ph)GYHSR ddPTM_A549_PD325901_60min_R1 1 GGSGYHSR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GGS(0.997)GY(0.003)HSR 51.445 0.008975 2877200.0 347.45 577.34 431.8 410.98 713.72 395.7 372.51 551.65 493.0 644.49 699.73 True False 382.72286822082884 625.9944679749065 461.1045446243359 436.3653011966988 663.5907694003325 392.4775503939168 386.6860718952934 540.6469079889472 472.28092445368145 603.7967914106482 613.6676459539315 0.6236647324398135 1.0200871303909353 0.7513913234052939 0.7110775744391404 1.0813520539587789 0.6395604411958528 0.6301229573447681 0.8810093078127407 0.7696037546830943 0.9839149829580159 1.0 9.261313712874953 -10.722933427148805 0.8311844370992271 1.0087953452347873 0.7936265783101363 0.22359652542103847 0.14481781687450734 0.8276561955783235 0.9480244208517443 0.1153890387192608 0.025409151368643922 1.8926337175789808e-11 10.722933427148805 -0.21516876692465103 GGS(ph)GYHSRS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 GGSGYHSRSPAR 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GGS(0.798)GY(0.049)HS(0.354)RS(0.799)PAR 42.788000000000004 0.023068 31248000.0 2144.0 2006.9 2056.5 1517.1 2349.1 1463.0 1694.0 1839.4 2206.4 2754.1 2985.9 True False 2505.8547842326443 2109.0426378370303 2348.1426233587454 1888.7895681052069 2003.550501833952 1617.8136889391972 2001.7778725088313 2100.140582926249 1706.6539228967902 2131.946897194478 2244.418623352312 1.1164827978881433 0.939683272939038 1.04621419503796 0.8415495881441538 0.89268128547312 0.7208163718240743 0.8918914910440963 0.9357169652198991 0.7603991096579368 0.9498882583722978 1.0 11.132126073580114 -6.258768612275195 24.952417691039937 0.8745760206275239 1.024682414381202 0.41104163874427235 0.08509560274644368 220.52415922962123 2060293.4926174558 0.014140712658350965 0.035648465654713 5.511012393885505e-07 6.258768612275195 0.15010639375367796 GGS(ph)LESR ddPTM_A549_MK2206_60min_R1 2 GGSLESR 7 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 GGS(0.622)LES(0.378)R;GGS(0.948)LES(0.052)R 67.494 0.023479 253590000.0 2229.7 2297.09 1776.56 1688.71 1827.8400000000001 1187.53 1087.53 1069.5900000000001 1717.19 3158.2 3364.4 True False 2606.0188490688083 2414.0020693353235 2028.5029219325115 2102.444025809073 1558.967157325007 1313.193636381384 1285.1201237836658 1221.2076579819975 1328.2492067889511 2444.7604265348414 2528.926627283737 1.0304841670586047 0.9545559935553166 0.8021201169095525 0.8313582541804546 0.6164540878750042 0.5192691722305347 0.5081682125210506 0.48289564624248077 0.5252225163272505 0.9667186070798358 1.0 11.304309464806982 -5.846808716363322 1.380507891438388 0.7022708933407233 1.0421278740678728 0.3303451452944077 0.17284174350585046 0.6999731701379914 2.1477121202100653 0.03244687963211896 0.24458398421832808 1.4229553853387444e-06 5.846808716363322 0.3398569807271494 GGS(ph)LESR ddPTM_A549_PD325901_60min_R1 1 GGSLESR 7 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 GGS(0.978)LES(0.022)R 82.75 0.014821 214600000.0 2044.7 1912.4 1750.1 2122.6 2316.0 1654.2 1658.4 1627.4 1712.5 1994.2 2233.2 True False 2252.2764387714155 2073.5646595683834 1868.8723102062295 2253.70818122564 2153.3321497662514 1640.7287436482611 1721.5113195113017 1594.9402303293978 1640.5295803791662 1868.2858716676978 1958.530557421177 1.1499827920668328 1.058734902915517 0.95422167559489 1.1507138209746022 1.0994631365882654 0.8377345645342549 0.8789810876262448 0.8143555505355385 0.8376328743827582 0.953922247773195 1.0 10.93555592236922 -7.252365071766818 24.758661698993972 0.9034154577787795 1.07794552953061 0.6481358568067414 0.07114248894491303 377.0355207000782 1028716.5169647122 0.012657987948792701 0.02172178722267852 5.5928726203830613e-08 7.252365071766818 0.17453007175183044 GGS(ph)LPK ddPTM_A549_MK2206_60min_R1 1 GGSLPK 6 0 P06748;P06748-2 P06748 NPM1 Nucleophosmin 1 GGS(1)LPK 64.567 0.058452 35939000.0 10067.0 9551.2 9395.9 8292.1 15156.0 12144.0 11794.0 12292.0 15130.0 11492.0 12859.0 True False 11766.063485480425 10037.315283526348 10728.379905089443 10323.664872246514 12926.572477031803 13429.070019465215 13936.817135991236 14034.428642671213 11703.079157645232 8895.949218459375 9665.755409654497 1.2172937330617808 1.0384408520725368 1.1099370354823543 1.0680660160234217 1.3373577055467685 1.3893451106834118 1.4418756264068768 1.4519743204605748 1.2107774986687314 0.9203573690240275 1.0 13.2386667727297 -10.139508434433845 1.0359631240193357 1.0229478289186904 1.2493441491700417 0.3710929814174966 0.1408370891588372 0.48194770859776737 1.033256623375394 0.059970222042769 0.02924611110227322 7.252563927488799e-11 10.139508434433845 0.22639632025135126 GGS(ph)LPK ddPTM_A549_PD325901_60min_R1 1 GGSLPK 6 0 P06748;P06748-2 P06748 NPM1 Nucleophosmin 1 GGS(1)LPK 67.98100000000001 0.054007000000000006 46817000.0 8532.4 9177.3 8654.4 8279.8 10208.0 7776.0 9136.8 8310.0 8718.2 9401.2 8860.1 True False 9398.602966779106 9950.703278737148 9241.739627134903 8791.224441209855 9491.025295688214 7712.67483412458 9484.505923848805 8144.250530931113 8351.804372357175 8807.606627581177 7770.363868801437 1.209544768490851 1.2805968223302808 1.1893573818648497 1.1313787345927577 1.221438977110886 0.9925757614893065 1.220599972406668 1.048117008217705 1.0748279634484381 1.133487025355961 1.0 12.923766443066503 -2.0000070396933114 0.11646470911961951 0.9404400216137978 1.946630144995683 0.3525602135118159 0.07445209164319727 38.12272479073874 0.29614436643698355 0.2246318038271186 6.2385257470093265 0.00999983790638495 2.0000070396933114 1.0061901233818853 GGS(ph)LPKVEAK ddPTM_A549_PD325901_60min_R1 4 GGSLPKVEAK 10 1 P06748;P06748-2 P06748 NPM1 Nucleophosmin 1 GGS(1)LPKVEAK;GGS(1)LPKVEAK;GGS(1)LPKVEAK;GGS(1)LPKVEAK 99.215 7.3546e-07 218110000.0 10047.2 9861.5 10877.8 10892.8 11930.1 11147.9 11406.7 12878.3 11325.8 10809.6 11296.8 True False 11067.184347642278 10692.563213937257 11616.032921525251 11565.623516656284 11092.170932610694 11057.11519847447 11840.78821048575 12621.432203669092 10849.816012530437 10127.080011222128 9907.365216315395 1.1170663547778474 1.0792539671727053 1.1724643906733176 1.1673763169253193 1.119588375963386 1.116050025113203 1.19515006784916 1.2739443765416245 1.0951262798572339 1.0221769148617745 1.0 13.274285719999321 -9.600765604363053 1.246703412283427 1.020817877585751 1.1508810168432488 0.5112752788514436 0.05183870645671943 0.23621408787014178 0.7524240863380738 0.014684445307554393 0.010759908726686796 2.507462205113885e-10 9.600765604363053 0.1300631392574978 GGS(ph)PAPLPAKVDEATSGLIR ddPTM_A549_MK2206_60min_R1 2 GGSPAPLPAKVDEATSGLIR 20 1 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 GGS(1)PAPLPAKVDEATSGLIR;GGS(1)PAPLPAKVDEATSGLIR 67.23899999999999 0.0003865 19788400.0 1359.69 1725.05 1605.4299999999998 1357.1 1951.65 1745.6 1602.6399999999999 1186.58 2427.5 2444.1000000000004 2495.32 True False 1589.1724307711224 1812.847676715715 1833.1041146699888 1689.5895609225345 1664.564870335122 1930.318233364499 1893.8189430918271 1354.781348748845 1877.6751259209393 1891.9761124988308 1875.6631766715186 0.847258959143831 0.9665102451564498 0.9773098589710262 0.9007958262105549 0.8874540434754369 1.0291390572533228 1.0096796517872293 0.7222945812440531 1.001072660205971 1.008697156307275 1.0 10.873185062955713 GGS(ph)PAPLPAKVDEATSGLIR ddPTM_A549_PD325901_60min_R1 3 GGSPAPLPAKVDEATSGLIR 20 1 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 GGS(1)PAPLPAKVDEATSGLIR;GGS(1)PAPLPAKVDEATSGLIR;GGS(1)PAPLPAKVDEATSGLIR 91.11399999999999 1.009e-06 26811300.0 3446.7599999999998 4194.049999999999 3745.61 3973.2299999999996 4201.85 5003.4 4585.91 5134.5 4341.37 4546.6 4207.4 True False 3796.672537829398 4547.497312519757 3999.809618782674 4218.647393239961 3906.7265515955633 4962.653969271981 4760.429314556243 5032.088369562674 4158.917316420847 4259.52690007239 3689.9164729060826 1.028931837809119 1.2324119924964767 1.0839837834140802 1.143290755825013 1.0587574489236953 1.3449231183717074 1.2901184483471662 1.363740454970118 1.1271033767182788 1.1543694637395674 1.0 11.84937244363392 -9.67108930325277 1.29473816098549 1.0273605163565878 1.1908802197681758 0.0900384253081371 0.11420465305501584 0.36804696989809055 1.2553668796011996 0.02970561027372294 0.021247800452769448 2.13260634375765e-10 9.67108930325277 0.16351970341158806 GGS(ph)PAVTLLISEK ddPTM_A549_MK2206_60min_R1 1 GGSPAVTLLISEK 13 0 Q8N884-2;Q8N884 Q8N884-2 MB21D1 Cyclic GMP-AMP synthase 1 GGS(1)PAVTLLISEK 79.633 8.0307e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GGS(ph)PAVTLLISEK ddPTM_A549_PD325901_60min_R1 1 GGSPAVTLLISEK 13 0 Q8N884-2;Q8N884 Q8N884-2 MB21D1 Cyclic GMP-AMP synthase 1 GGS(0.964)PAVT(0.036)LLISEK 99.01100000000001 3.2427e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GGS(ph)PPWAANSQPQPPR ddPTM_A549_MK2206_60min_R1 1 GGSPPWAANSQPQPPR 16 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form 1 GGS(1)PPWAANSQPQPPR 87.13799999999999 1.362e-05 11535000.0 2158.5 3064.7 2315.2 2662.7 3754.8 2350.8 2343.6 2423.2 3549.5 3677.7 4104.2 True False 2522.8020297416815 3220.680139607925 2643.5301734014897 3315.061619533146 3202.4738939534845 2599.560095665251 2769.401783950234 2766.696020738766 2745.543917386764 2846.9050157264214 3085.0138698424416 0.8177603525233184 1.0439759026990734 0.8568940967310791 1.07456943773885 1.0380743909320063 0.8426412993073565 0.8976950836501987 0.8968180168603479 0.8899616122396833 0.9228175741951589 1.0 11.591061260230598 -3.8518622413937713 16.418652030476878 0.9422829852025283 0.30354275724901114 0.0 0.08541108545240929 0.0 0.0 0.01084310462075712 0.0 0.0001406493594431691 3.8518622413937713 -0.6387402279535171 GGS(ph)PQMDDIK ddPTM_A549_MK2206_60min_R1 3 GGSPQMDDIK 10 0 A0A3B3ITG6;A0A3B3IUB1;Q13144 A0A3B3ITG6 EIF2B5 Translation initiation factor eIF-2B subunit epsilon 1 GGS(1)PQMDDIK;GGS(1)PQMDDIK;GGS(1)PQMDDIK 77.74 0.00048999 146498000.0 10641.4 10399.3 9043.2 9370.400000000001 11255.0 10792.099999999999 9045.8 10176.2 12295.7 12793.3 12984.500000000002 True False 12437.408162748721 10928.579950998359 10325.661741579284 11666.148420653244 9599.404409408342 11934.112858783801 10689.304769268238 11618.707513305477 9510.743582198185 9903.284644667274 9760.090296030705 1.2743128173524014 1.1197211930962219 1.0579473579028864 1.1952910338747282 0.9835364344233873 1.2227461526290635 1.0952055201390332 1.1904303301405568 0.9744524173168843 1.0146714163797035 1.0 13.252678779687248 -8.771175112426445 24.999773003419552 0.9879358506608382 1.1364006744418527 0.41303139549165746 0.07710817560865847 122.98549722516395 315805.8029017228 0.01213071378641209 0.012993196820528389 1.6936547620769562e-09 8.771175112426445 0.14846482378101444 GGS(ph)PQMDDIK ddPTM_A549_PD325901_60min_R1 2 GGSPQMDDIK 10 0 A0A3B3ITG6;A0A3B3IUB1;Q13144 A0A3B3ITG6 EIF2B5 Translation initiation factor eIF-2B subunit epsilon 1 GGS(1)PQMDDIK;GGS(1)PQMDDIK 86.288 0.00027460000000000006 168075000.0 23957.7 23538.1 25206.1 26538.0 28702.0 22781.9 23552.9 25156.3 24631.0 23362.1 27826.0 True False 26389.86806727342 25521.73829396912 26916.73752259257 28177.191987829094 26686.0705365246 22596.371759714875 24449.218498141407 24654.537861764413 23595.844726609794 21887.013018999063 24403.578403547235 1.0813933772695181 1.0458195053172756 1.1029832214557531 1.1546336165081976 1.093531042670594 0.925945014540586 1.001870221401118 1.0102837155300428 0.9669010149421352 0.8968771979693613 1.0 14.574805091539664 -7.238770139889198 23.278137108256498 0.9839722756527152 1.0965844058564305 0.6985607053055922 0.04127676243769409 130.44038001560511 133943.6959305717 0.00484595531374917 0.008388055054258327 5.7707181079869235e-08 7.238770139889198 0.1126121302037153 GGS(ph)REYDTGGGSSSSR ddPTM_A549_MK2206_60min_R1 4 GGSREYDTGGGSSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 GGS(1)REYDTGGGSSSSR;GGS(1)REYDTGGGSSSSR;GGS(0.989)REY(0.004)DT(0.001)GGGS(0.001)S(0.001)S(0.001)S(0.001)R;GGS(1)REYDTGGGSSSSR 169.7 1.7332999999999998e-28 331207000.0 4288.4 5296.1900000000005 5152.71 5032.0599999999995 6893.17 5459.139999999999 5636.43 5618.43 8468.76 9131.9 10444.1 True False 5012.177078686227 5565.743449143503 5883.441758719588 6264.914925897758 5879.193824327086 6036.822571316148 6660.496371868328 6414.859658220249 6550.59938183078 7068.997447620008 7850.541727503894 0.6384498360318716 0.7089629789042787 0.749431308428985 0.7980232630251503 0.7488902076311102 0.7689689171597558 0.8484123265702398 0.8171231847282817 0.834413676050043 0.9004470892568096 1.0 12.938576495432896 -14.999999996519845 0.05002117416299483 2.0114513059416055 0.270269841958247 0.8213296256856035 0.039161248850084034 67.28588262625048 0.2568016077028606 9.089449606861377 2.1320219757098386 1.0000000080133527e-15 14.999999996519845 -1.7411814639833585 GGS(ph)REYDTGGGSSSSR ddPTM_A549_PD325901_60min_R1 4 GGSREYDTGGGSSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 GGS(0.998)REYDT(0.002)GGGSSSSR;GGS(1)REYDTGGGSSSSR;GGS(0.993)REYDT(0.002)GGGS(0.001)S(0.001)S(0.001)S(0.001)R;GGS(1)REYDTGGGSSSSR 154.07 1.2808999999999998e-41 286987000.0 3389.42 3321.4600000000005 3615.67 3194.5699999999997 4052.14 3137.16 3473.99 3657.6099999999997 3590.3 4011.7200000000003 4182.200000000001 True False 3733.511423240876 3601.3710908648823 3861.051108989977 3391.8913335051298 3767.5316655241027 3111.6120090820827 3606.1945904902723 3584.6560992104646 3439.4121766045673 3758.4193145555814 3667.815913150119 1.0179113433297513 0.9818843628310205 1.052683995166458 0.9247714208731893 1.027186684047167 0.8483555562115608 0.9831994505397839 0.9773271571123557 0.9377275899461961 1.0247022761095028 1.0 11.840705516874761 -6.260934962620977 24.999992523355086 0.964244398042945 1.0139323449832007 0.17505556468920902 0.05014694860771229 57.86499076948975 2867829.8219934134 0.006380766206951342 0.01581223911274227 5.483590777921869e-07 6.260934962620977 0.04968794694025569 GGS(ph)SKDLLDNQSQEEQR ddPTM_A549_MK2206_60min_R1 4 GGSSKDLLDNQSQEEQR 17 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 GGS(0.795)S(0.205)KDLLDNQSQEEQR;GGS(0.84)S(0.159)KDLLDNQS(0.001)QEEQR;GGS(0.832)S(0.168)KDLLDNQSQEEQR;GGS(0.8)S(0.2)KDLLDNQSQEEQR 220.52 1.1009e-56 61143000.0 11631.4 14556.7 13667.8 13956.5 20087.1 17406.0 14796.599999999999 16837.7 21574.8 22160.3 22587.2 True False 13594.49595957257 15297.573853307229 15606.099561168312 17375.843126531086 17132.314199220466 19247.891366832304 17484.950689707304 19224.49553829361 16688.14224787603 17154.27283900324 16978.17486499323 0.8007042021697302 0.9010140356634457 0.9191859363721151 1.0234223209915099 1.009078675149297 1.133684363595461 1.02984866328353 1.132306369274827 0.9829173265428423 1.0103720202795825 1.0 14.051393758655564 -5.717764970906122 1.3224672753720847 1.0177974694487772 0.7956352917668086 0.6656106429707267 0.053183604577621724 0.3680124770237517 0.9274942070107693 0.008570917706419042 0.0876487673258869 1.9152921518556533e-06 5.717764970906122 -0.22216217768196866 GGS(ph)SKDLLDNQSQEEQR ddPTM_A549_PD325901_60min_R1 1 GGSSKDLLDNQSQEEQR 17 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 GGS(0.831)S(0.169)KDLLDNQSQEEQR 176.48 9.759e-31 58858000.0 9384.5 11732.0 11223.0 11420.0 13056.0 9582.3 10213.0 11484.0 12849.0 13509.0 13761.0 True False 10337.207531496233 12720.69681345758 11984.660269381482 12125.387463298219 12138.99160075483 9504.264925801444 10601.661303768038 11254.942610976279 12309.001213601117 12656.039434539642 12068.484238166227 0.8565456380019222 1.0540426256040298 0.9930543084673671 1.0047150266768412 1.0058422715891384 0.7875276412711785 0.8784583958141648 0.9325895770226764 1.0199293441237849 1.0486850862774704 1.0 13.558956869279392 -8.760901592927986 24.998862096080913 1.0094110817898603 0.942065553849984 0.1962330398063753 0.0739803927610557 21.26278286757278 988391.7454428877 0.012978087600247335 0.014289689445411613 1.7341969060542028e-09 8.760901592927986 -0.06734552793987625 GGS(ph)SKDLLDNQSQEEQRR ddPTM_A549_MK2206_60min_R1 4 GGSSKDLLDNQSQEEQRR 18 2 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 GGS(0.955)S(0.045)KDLLDNQSQEEQRR;GGS(0.786)S(0.214)KDLLDNQSQEEQRR;GGS(0.963)S(0.037)KDLLDNQSQEEQRR;GGS(0.499)S(0.499)KDLLDNQS(0.003)QEEQRR 122.18 4.7458e-11 84422000.0 10939.099999999999 15220.099999999999 14779.900000000001 13127.3 21536.3 15546.1 12953.400000000001 13255.400000000001 22171.200000000004 26215.2 27045.100000000002 True False 12785.352644682524 15994.738079696732 16875.912063690703 16343.489089306884 18368.33879896411 17191.177983334008 15306.865108474565 15134.393542959973 17149.45860013114 20293.168112752872 20329.055263212304 0.6289201578304058 0.7867920015270458 0.8301375467373318 0.8039472999457212 0.903551028866731 0.8456456908965841 0.7529550640837721 0.7444710709379274 0.8435934861746872 0.9982346867577081 1.0 14.311255551016004 -14.999999999999995 0.15395762545842737 1.780300530906085 0.7374504083666709 0.6013322384622 0.06574571917841328 31.891262067650423 0.3206848642508813 7.460665968896223 0.12287157995620494 1.0000000000000123e-15 14.999999999999995 -1.0428501225394142 GGS(ph)SKDLLDNQSQEEQRR ddPTM_A549_PD325901_60min_R1 4 GGSSKDLLDNQSQEEQRR 18 2 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 GGS(0.5)S(0.5)KDLLDNQSQEEQRR;GGS(0.5)S(0.5)KDLLDNQSQEEQRR;GGS(0.642)S(0.358)KDLLDNQSQEEQRR;GGS(0.819)S(0.18)KDLLDNQSQEEQRR 213.2 3.2888999999999994e-56 192505000.0 24353.699999999997 28507.6 26203.0 27133.1 35767.0 36539.2 30196.8 37589.6 38203.5 39699.6 40931.1 True False 26826.069695753635 30910.035499430905 27981.29315143926 28809.04996325892 33254.84930945146 36241.63686973316 31345.95574832299 36839.84593952926 36597.939751249934 37192.960480823895 35896.83418362077 0.7473101822442604 0.8610797080689285 0.7794919465128415 0.8025512727917409 0.9264006162589455 1.0096053786901833 0.8732234042696088 1.0262700535396732 1.019531125336648 1.0361069806482972 1.0 15.131568994935243 -6.9946409238384675 0.9260498031365266 1.006967693627839 0.784468900638613 0.7715518547090512 0.04951104563138429 0.1891376219890408 0.3128784463335518 0.007897817368381847 0.022791646842181504 1.0124161774641761e-07 6.9946409238384675 -0.22249879298922592 GGS(ph)TTGSQFLEQFK ddPTM_A549_MK2206_60min_R1 2 GGSTTGSQFLEQFK 14 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 GGS(0.326)T(0.326)T(0.326)GS(0.023)QFLEQFK;GGS(0.785)T(0.072)T(0.072)GS(0.072)QFLEQFK 69.714 0.0026898000000000004 2460600.0 2027.94 2242.0 2078.77 2164.4 2908.5 2168.98 2441.0 2614.7 3506.7 3114.8 2988.3 True False 2370.2066936272167 2356.1082236437373 2373.5708442302257 2694.6780971636067 2480.6635028666524 2398.5000239476008 2884.498103184212 2985.341732182919 2712.4380490492103 2411.1645166774483 2246.2226371156803 1.0551966908635295 1.0489201670005242 1.0566943832771938 1.1996487136394356 1.1043711615568135 1.0677926507888176 1.2841550323293536 1.3290497935753702 1.2075552993857215 1.0734307796726534 1.0 11.133285213978626 -6.13461665803616 9.46521529747724 1.1334910971503 1.0523044238331976 0.1632082514416604 0.09410762993584122 0.7199874120298995 51.81140274872556 0.0163534396474965 0.043377893377996773 7.334716664224687e-07 6.13461665803616 -0.0811866733171025 GGS(ph)TTGSQFLEQFK ddPTM_A549_PD325901_60min_R1 2 GGSTTGSQFLEQFK 14 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 GGS(0.968)T(0.019)T(0.013)GSQFLEQFK;GGS(0.962)T(0.032)T(0.005)GSQFLEQFK 114.7 4.2175e-06 4723100.0 3875.6000000000004 3809.7 4043.3 3324.7 4797.5 4279.700000000001 4120.9 4223.7 4183.1 4260.0 5017.200000000001 True False 4269.048058934074 4130.756789143315 4317.702652338069 3530.0591680584557 4460.54015047651 4244.847542130011 4277.7231045430035 4139.45499007145 4007.298854122099 3991.0228729838527 4400.116206651232 0.970212571313677 0.9387835673292555 0.9812701414138595 0.802264986257046 1.0137323518260588 0.9647125991157879 0.9721841205186312 0.9407603789677724 0.9107256867590569 0.9070266978292546 1.0 12.103325910354206 GGS(ph)TVPK ddPTM_A549_MK2206_60min_R1 1 GGSTVPK 7 0 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 GGS(0.903)T(0.097)VPK 73.26 0.019144 33660000.0 2758.4 3534.6 3356.3 2377.5 3673.0 4391.2 4015.2 4903.8 2314.7 4014.4 4002.5 True False 3223.950483594835 3714.4960425027452 3832.2738083048666 2959.9876067300297 3132.7065655936785 4855.873869357347 4744.709866409361 5598.928667257659 1790.4241458163538 3107.544251878116 3008.5687866196513 1.0715894208346093 1.2346388950861433 1.2737863350004068 0.9838523951635468 1.0412614062627117 1.6140145742897503 1.5770654430475535 1.8609940687274324 0.5951082633639988 1.0328978568476312 1.0 11.554861626964364 -8.78719941263288 24.999997973851062 0.8088011122833939 1.3232078077583886 0.34392904805326285 0.2761625248019011 169.49677269062815 164495.06358886918 0.05248912063274373 0.05588814351381186 1.632302280445573e-09 8.78719941263288 0.5144066954749947 GGSDGT(ph)PRGS(ph)PSPASVSSGR ddPTM_A549_MK2206_60min_R1 1 GGSDGTPRGSPSPASVSSGR 20 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 2 GGS(0.054)DGT(0.947)PRGS(0.831)PS(0.141)PAS(0.024)VS(0.001)S(0.001)GR 76.471 0.00017453 18804000.0 757.13 799.95 671.46 741.58 1002.1 612.62 498.14 606.73 936.08 1385.2 943.59 True False 884.9150339487236 840.6640381372919 766.6831246683507 923.2671332907909 854.6924174738431 677.4470417757562 588.6455899713986 692.7358355326966 724.0593746125938 1072.282357936819 709.2705612408341 1.2476410023286573 1.1852515585400742 1.0809459274991988 1.301713596678227 1.2050301594057429 0.9551320452248798 0.8299309489760748 0.9766877033790732 1.0208507362069101 1.5118100433506128 1.0 9.470192258566877 -7.256353547356828 24.559196458950964 0.9888996654463017 1.201647668667178 0.11779397780280676 0.1727103603197514 158.25651029902457 764210.8142811736 0.011030460672986383 0.018728601785844155 5.5417439093947717e-08 7.256353547356828 0.21274800322087628 GGSDGT(ph)PRGS(ph)PSPASVSSGR ddPTM_A549_PD325901_60min_R1 3 GGSDGTPRGSPSPASVSSGR 20 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 2 GGS(0.017)DGT(0.978)PRGS(0.896)PS(0.093)PAS(0.012)VS(0.002)SGR;GGS(0.037)DGT(0.963)PRGS(0.834)PS(0.158)PAS(0.008)VSS(0.001)GR;GGS(0.347)DGT(0.733)PRGS(0.699)PS(0.167)PAS(0.047)VS(0.004)S(0.004)GR 88.573 2.4636e-06 61798700.0 3745.9500000000003 3489.8100000000004 3525.05 3261.41 4592.889999999999 3542.4 3602.08 3526.48 3285.64 2830.1800000000003 4039.64 True False 4126.236086377362 3783.9085361892617 3764.2810908476495 3462.8598885004776 4270.301251010327 3513.5518688789775 3739.159125533806 3456.1415899299586 3147.5559769208785 2651.4819517984597 3542.7898893878237 1.1646855205094748 1.0680589745171432 1.0625188646166364 0.977438684375054 1.2053498469671353 0.9917471762589064 1.0554278527028071 0.9755423544259811 0.8884399231095131 0.748416370877874 1.0 11.790670191403464 -8.091816006239021 1.7167521227177487 0.9471314485363171 1.080583350315273 0.44241535367632956 0.08895188246689803 0.25348620297286273 1.477299076162823 0.011849562725495394 0.01625693379971868 8.094387544138773e-09 8.091816006239021 0.13345190177895594 GGSDGTPRGS(ph)PSPASVSSGR ddPTM_A549_PD325901_60min_R1 2 GGSDGTPRGSPSPASVSSGR 20 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 GGSDGTPRGS(0.965)PS(0.035)PASVSSGR;GGS(0.001)DGT(0.072)PRGS(0.922)PS(0.006)PASVSSGR 141.69 2.3314e-21 74558000.0 4406.0 4371.5 4609.1 5018.0 5580.6 5574.2 5272.5 5907.2 5751.6 5790.1 5863.6 True False 4853.293876474231 4739.901646780583 4921.901242769862 5327.950463295135 5188.637908024848 5528.805563320123 5473.147872722706 5789.37626189125 5509.880253727775 5424.512097855355 5142.4143724229 0.9437772853352449 0.9217268978165467 0.9571187551832504 1.0360795683574635 1.0089886835743596 1.0751380894097748 1.064314828861988 1.125808976604024 1.0714578512528037 1.054857058378114 1.0 12.328230150950587 -6.2238723823052995 2.0940500491529073 1.045696804258908 0.9305055684671895 0.6977631820150766 0.03320301989141608 0.18454544830976627 1.54998044377678 0.005974697165487913 0.01973598575337133 5.972107515408473e-07 6.2238723823052995 -0.11519123579171864 GGSDGYGS(ph)GR ddPTM_A549_PD325901_60min_R1 1 GGSDGYGSGR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGSDGYGS(1)GR 96.95700000000001 0.00052549 21991000.0 1487.0 1409.0 1258.5 1559.5 1760.0 1521.4 1194.2 1111.9 1522.8 1597.8 1660.9 True False 1637.9591453284577 1527.7413748859294 1343.9093779752825 1655.8267731185258 1636.3836716703825 1509.0102228185624 1239.645934491315 1089.7222822313238 1458.8020116796474 1496.9146353177462 1456.6198293125703 1.1244932358922146 1.0488264296161092 0.9226219161176188 1.1367597363410658 1.1234116402511485 1.0359671016772556 0.8510428799231349 0.7481171547318574 1.001498113868261 1.02766322769627 1.0 10.508408674807637 -7.537141757388647 24.729871378566834 0.9665124579294543 1.0667963014073123 0.3149128366867924 0.09518061532871709 278.332888523107 482584.9720754959 0.015759462957822268 0.023380853165984053 2.903074911615325e-08 7.537141757388647 0.10028384347785801 GGSDGYGSGR ddPTM_A549_MK2206_60min_R1 2 GGSDGYGSGR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 113.74 0.00027953 31640000.0 3934.7 5179.799999999999 4314.1 3885.2999999999997 5537.6 3528.6 4096.4 3584.3999999999996 5742.3 6539.700000000001 5996.7 False True 4598.781165820981 5443.429695285389 4925.90425063553 4837.198674417747 4723.026375614364 3901.9941099048883 4840.66285533954 4092.499676764619 4441.678218568819 5062.377227981095 4507.553889499583 1.0202387544459341 1.2076238751057293 1.0928109505491437 1.0731316348066466 1.047802531350036 0.8656566744536641 1.073900162705972 0.9079202993663947 0.985385494539683 1.123087455432087 1.0 12.138129024383833 -6.803290046413031 2.5163014891290763 0.9841531743789816 1.1113106696030144 0.2758533221492524 0.07813933947667619 0.18639742674102724 2.4080271879577526 0.008739577588054302 0.018795579331971513 1.5729320206509625e-07 6.803290046413031 0.12715749522403275 GGSDS(ph)SLSEPGPGR ddPTM_A549_MK2206_60min_R1 1 GGSDSSLSEPGPGR 14 0 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20 Q8NF91 SYNE1 Nesprin-1 1 GGS(0.01)DS(0.487)S(0.487)LS(0.016)EPGPGR 56.295 0.014315999999999999 9556800.0 780.27 899.18 557.9 560.68 771.89 670.51 724.96 495.73 1070.8 921.43 1086.5 True False 911.9605002300399 944.9444212916934 637.0186090794283 698.046625169882 658.3460035165001 741.4629231514839 856.6758479657628 566.0012456094536 828.2655097162269 713.2783230390718 816.6920641254846 1.1166516001432791 1.1570388189133949 0.7799985295088535 0.8547243885825578 0.806112894241795 0.9078855491824127 1.0489582127666355 0.6930411968867712 1.0141711253226577 0.8733748671879792 1.0 9.673648398742028 -8.902906120239313 20.235852297468416 1.0067353315251337 0.917352329895089 0.0 0.14076363586604107 7.2820482402191375 1503.7473735066383 0.02353138939865064 0.025050704568081124 1.2505293230961766e-09 8.902906120239313 -0.08938300163004476 GGSDSS(ph)LSEPGPGR ddPTM_A549_MK2206_60min_R1 1 GGSDSSLSEPGPGR 14 0 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20 Q8NF91 SYNE1 Nesprin-1 1 GGS(0.008)DS(0.357)S(0.634)LSEPGPGR 102.33 2.7673e-05 7986200.0 492.92 780.02 739.48 846.48 1133.1 951.2 767.97 740.81 984.13 1212.5 959.52 True False 576.1128452630386 819.7196862652046 844.349383477425 1053.867637999931 966.4224910084939 1051.855352644541 907.5002082353051 845.8220861354757 761.2261263326768 938.5954078821776 721.2447025952 0.7987758429144166 1.1365347756672175 1.170683653466385 1.4611790342554742 1.339937038748554 1.4583890167369407 1.258241765894316 1.172725543899343 1.0554339235957153 1.3013550110037566 1.0 9.494345007251804 -8.69196260781755 2.3182019236439615 1.022647485849625 1.2468723877030499 0.0 0.1899432934486854 0.31397699486713837 3.3380642846034148 0.03206412492899532 0.035518762295643276 2.0325320017291545e-09 8.69196260781755 0.2242249018534248 GGSDSS(ph)LSEPGPGR ddPTM_A549_PD325901_60min_R1 2 GGSDSSLSEPGPGR 14 0 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20 Q8NF91 SYNE1 Nesprin-1 1 GGS(0.001)DS(0.046)S(0.94)LS(0.013)EPGPGR;GGS(0.022)DS(0.155)S(0.824)LSEPGPGR 166.62 4.2939e-20 21013000.0 2568.7 2200.1000000000004 2380.8 2299.8999999999996 2587.8 2266.6 2264.0 2986.6 2414.0 2387.8 2871.9 True False 2829.472533023004 2385.510148251623 2542.3754049134304 2441.959599548123 2406.0418554253483 2248.141561088834 2350.1577589083367 2927.0299200576246 2312.5479749111305 2237.033900495502 2518.674506474064 1.1233974559833186 0.9471291912153984 1.0094100680252431 0.969541555795022 0.9552809818183327 0.8925891596195358 0.9330930824397644 1.1621310782849923 0.9181607107098989 0.8881790381192068 1.0 11.298448976310537 -5.256141025832009 24.159883806062247 0.9696322504675741 1.1233975606289965 0.27942625425999235 0.07187572914889077 336.40565678376043 1533889.1115684991 0.009099073511864961 0.10562931449961935 5.544456419280876e-06 5.256141025832009 0.15376531016142247 GGSFWSSIPAS(ph)PASRPGSFTFPGDSDSLQR ddPTM_A549_MK2206_60min_R1 2 GGSFWSSIPASPASRPGSFTFPGDSDSLQR 30 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 GGSFWS(0.001)S(0.005)IPAS(0.959)PAS(0.034)RPGSFTFPGDSDSLQR;GGSFWS(0.001)S(0.005)IPAS(0.987)PAS(0.006)RPGSFTFPGDSDSLQR 95.09899999999999 5.279e-10 14289800.0 2187.6 1757.6 2269.12 2030.92 2955.3999999999996 2358.2 2471.7 2667.8 3976.9 4056.1000000000004 3660.8 True False 2556.8133983149883 1847.0543326834238 2590.915336501724 2528.495491171462 2520.664574994708 2607.743158753529 2920.775895796978 3045.9688197948485 3076.1384998043177 3139.824192916206 2751.7223270598947 0.9291683878027188 0.6712357255380951 0.941561330888358 0.9188774122689402 0.9160315887278995 0.9476767089140852 1.0614355478656563 1.1069317531937695 1.1178956792094095 1.141039618002076 1.0 11.426119181451773 -7.049813779709428 0.9184945751960808 1.061958758911969 0.8288370309879226 0.6204284669878863 0.07799452935356778 0.30003700281293505 0.490301155006857 0.013335084161399108 0.03706692137847077 8.916331778430684e-08 7.049813779709428 -0.2331217279240464 GGSFWSSIPAS(ph)PASRPGSFTFPGDSDSLQR ddPTM_A549_PD325901_60min_R1 1 GGSFWSSIPASPASRPGSFTFPGDSDSLQR 30 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 GGSFWS(0.002)S(0.008)IPAS(0.919)PAS(0.046)RPGS(0.011)FT(0.013)FPGDS(0.001)DSLQR 66.097 0.00018577 5342500.0 1926.3 1769.7 1921.5 1481.2 1767.6 1711.6 1810.0 2035.9 1841.1 2083.1 2557.8 True False 2121.8565579328906 1918.83882976269 2051.90454491816 1572.690359950729 1643.4498738889583 1697.661297079172 1878.8805404700038 1995.292377367346 1763.724969597713 1951.57271049593 2243.2068152301126 0.9459032236914929 0.8553998751853167 0.9147192898072893 0.7010902201585008 0.7326341301795528 0.7568010606748369 0.8375868545483465 0.8894821305910953 0.786251609803881 0.8699923240451344 1.0 11.131346922274005 -10.830219963390974 0.8348741355454128 1.0125679853894025 0.8191350249090508 0.14631277332149017 0.08188499137650364 0.5650489652832072 0.6211940951433254 0.07352899343748412 0.013995167653177392 1.4783594324898275e-11 10.830219963390974 -0.19343296048035175 GGSGS(ph)GPTIEEVD ddPTM_A549_MK2206_60min_R1 1 GGSGSGPTIEEVD 13 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 1 GGS(0.014)GS(0.986)GPTIEEVD 155.48 2.446e-18 5318800.0 771.16 553.64 923.42 581.3 1327.5 1052.6 930.5 896.54 1388.9 1081.6 1411.8 True False 901.312954948156 581.8179112123637 1054.3748413624767 723.7185260955489 1132.2265085286167 1163.9854333406681 1099.5598054129086 1023.6272905385983 1074.3163676175457 837.265808796176 1061.2110963022174 0.8493248497766134 0.5482584127132708 0.9935580630813591 0.6819741412593037 1.0669192137868253 1.096846270639807 1.0361367396593544 0.9645840437453213 1.012349353828841 0.7889719695860916 1.0 10.051495950618836 -6.76645392041094 24.999744787444122 1.015640666114964 0.7686544821206925 0.41963644180044024 0.12687222562109518 64.02543432056304 319197.5845852062 0.013847442462410965 0.026760974682920588 1.7121668316902622e-07 6.76645392041094 -0.2469861839942714 GGSGS(ph)GPTIEEVD ddPTM_A549_PD325901_60min_R1 2 GGSGSGPTIEEVD 13 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 1 GGS(0.004)GS(0.915)GPT(0.081)IEEVD;GGS(0.049)GS(0.951)GPTIEEVD 155.15 2.5134e-18 15637700.0 1607.44 1204.28 1419.53 1802.6399999999999 1731.83 1567.88 1277.4499999999998 1431.79 1293.49 1627.32 1630.52 True False 1770.626125465216 1305.7689020210282 1515.8678421273364 1913.9849787075204 1610.1922352891581 1555.111705108958 1326.0640587974626 1403.2318252324749 1239.129113532642 1524.5707374798308 1429.9763767178833 1.23822054286603 0.9131401911813822 1.0600649540844815 1.338473145340027 1.126027157864601 1.0875086682748483 0.9273328429670127 0.9812972074777954 0.866538170635183 1.066150995430472 1.0 10.481775598467522 -7.676626725329236 3.7729602106794604 0.9384499778216074 1.1282830092516765 0.3280013983881075 0.11069497199357703 0.17739148969014398 4.917518958473498 0.016913162735665867 0.02530213085313341 2.105587407666793e-08 7.676626725329236 0.18983303143006902 GGSGSGPT(ph)IEEVD ddPTM_A549_PD325901_60min_R1 1 GGSGSGPTIEEVD 13 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 1 GGS(0.004)GS(0.01)GPT(0.986)IEEVD 65.395 0.0057934 1504600.0 397.99 421.56 301.18 388.65 458.67 531.35 393.22 415.32 410.53 461.38 594.62 True False 438.39365181524755 457.08634066494864 321.6198859424674 412.65602781180837 426.45460152559895 527.022861768531 408.18420227824015 407.03611678776275 393.2768517565309 432.2483880603965 521.4855096067441 0.8406631512078702 0.8765082293650702 0.616737915086084 0.7913087136840967 0.8177688424117313 1.010618419993995 0.7827335462994067 0.7805319789129166 0.7541472284687329 0.8288790006578669 1.0 9.026483355254316 -10.842724089254128 1.0290306990017242 1.0028086810829058 0.8051573676269904 0.05405097472265663 0.10212534290979439 0.46705648099820907 0.8575786493632311 0.06843646464955251 0.01583525792697306 1.4364017009869155e-11 10.842724089254128 -0.19765131345591536 GGSGSHNWGTVKDELT(ph)ESPK ddPTM_A549_PD325901_60min_R1 1 GGSGSHNWGTVKDELTESPK 20 1 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GGSGSHNWGTVKDELT(0.5)ES(0.5)PK 172.98 1.0489e-34 13480000.0 2290.8 1836.3 1917.1 1854.9 2060.2 1874.2 1770.4 1426.9 2341.1 2576.1 3137.1 True False 2523.360329602173 1991.0514454954098 2047.2059344588095 1969.4729602164502 1915.498659304159 1858.9371365890304 1837.7735408000526 1398.4393601186055 2242.71170839455 2413.444606360025 2751.256587715373 0.9171664834422282 0.7236880247322796 0.7440985125123488 0.7158448866639112 0.6962268324434173 0.6756683999919763 0.6679760619223556 0.5082911446219784 0.8151590507437492 0.8772153848304403 1.0 11.42587497922796 -9.625162861814813 1.14836201677033 0.9625942353232557 0.708868315348198 0.42469362045893266 0.09851801506993302 0.22858280276607 0.6205717245119237 0.027283949181577245 0.0192719139583037 2.370484599683657e-10 9.625162861814813 -0.25372591997505767 GGSGSHNWGTVKDELTES(ph)PK ddPTM_A549_MK2206_60min_R1 2 GGSGSHNWGTVKDELTESPK 20 1 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GGSGSHNWGTVKDELT(0.248)ES(0.752)PK;GGSGSHNWGTVKDELT(0.265)ES(0.735)PK 164.79 1.0257e-27 20888400.0 3880.3 3103.1000000000004 2471.0 2636.4 4208.5 3733.7 3079.7 3511.1 4197.3 4582.6 4204.3 True False 4535.19977577329 3261.0345355882623 2821.4249561485335 3282.3181183524935 3589.4352249662375 4128.797655770526 3639.241625717503 4008.8091772927874 3246.618251710797 3547.3874772460754 3160.256277222988 1.4350734174503423 1.0318892676811107 0.8927835936862071 1.0386240324904172 1.135805108856672 1.3064755809609923 1.1515653499201064 1.2685076226841476 1.0273275224893146 1.1224999386325945 1.0 11.625825841446392 -8.959908225174331 22.096004799390975 1.0120560319869187 1.144848748665129 0.0810700366862922 0.14324029085032464 62.25931495392808 34313.524169016055 0.02460854971619468 0.02614688907767263 1.0967099276817622e-09 8.959908225174331 0.13279271667821035 GGSGSHNWGTVKDELTES(ph)PK ddPTM_A549_PD325901_60min_R1 2 GGSGSHNWGTVKDELTESPK 20 1 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GGSGSHNWGTVKDELT(0.112)ES(0.888)PK;GGSGSHNWGT(0.001)VKDELT(0.145)ES(0.855)PK 147.52 1.8553e-21 19135100.0 3841.2 3848.3999999999996 3851.3 3584.5 3482.3 3913.5 3277.4 3394.2 4022.3 5183.3 5206.0 True False 4231.155796258018 4172.718173960973 4112.672377748274 3805.9064240098455 3237.7152612828245 3881.6297535167882 3402.1232504620943 3326.500018301609 3853.2567189250344 4856.025553412488 4565.695003553041 0.9267276489045626 0.9139283659363467 0.9007768531511143 0.8335875307150554 0.7091396290736071 0.8501728106008153 0.7451490403573934 0.7285856842633848 0.8439584150773137 1.0635895629544923 1.0 12.156618772880387 -10.289274406835492 0.9134766448595583 0.9906149678605273 0.8267223662625989 0.5081129199759775 0.07448274713368798 0.3986321846382602 0.6464185990443579 0.037170559407563655 0.014578599637898215 5.1371895821449176e-11 10.289274406835492 -0.1638926015979284 GGSISVQVNSIKFDS(ph)E ddPTM_A549_MK2206_60min_R1 9 GGSISVQVNSIKFDSE 16 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.005)IKFDS(0.995)E;GGSISVQVNS(0.009)IKFDS(0.991)E;GGSISVQVNS(0.003)IKFDS(0.997)E 247.5 1.5538999999999997e-66 122735000.0 33289.04 40615.78 39197.9 37211.36 59873.40000000001 45449.840000000004 42461.170000000006 42759.700000000004 67047.79999999999 52408.229999999996 51538.0 True False 38907.416113111896 42682.94971797721 44756.751634404936 46328.14487048142 51066.102173813386 50259.31190163793 50175.81496271303 48821.01842108919 51861.58035333544 40569.17444390348 38739.692223561215 1.004329510120596 1.1017885602100301 1.155320268837453 1.1958831423628338 1.3181855415659531 1.2973596075982907 1.295204274550133 1.2602324804066611 1.338719472887128 1.0472250065845796 1.0 15.241524871711944 -5.529284637001542 1.6075319135898671 1.2023810033957472 0.9852877382328544 0.28336118098509766 0.1038468114058207 0.9058581532953255 3.185269159893424 0.01983058667077569 0.260337209262443 2.9560744176383535e-06 5.529284637001542 -0.21709326516289273 GGSISVQVNSIKFDS(ph)E ddPTM_A549_PD325901_60min_R1 4 GGSISVQVNSIKFDSE 16 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E 283.85 2.7204999999999992e-107 296400000.0 56032.0 62939.0 73239.0 72344.0 79364.0 83827.0 77043.0 84465.0 76136.0 75464.0 68154.0 True False 61720.32739142173 68243.09041443972 78209.43896188455 76812.52457485524 73789.7464309364 83144.34070475325 79974.91352454742 82780.27931348949 72936.26869007201 70699.19016123323 59771.490063802135 1.0326047974634618 1.1417331296508537 1.3084739710922568 1.2851030565385424 1.2345308164840914 1.391036773819795 1.338011039028464 1.3849458868287705 1.2202518058729561 1.1828246223369452 1.0 15.86716988819656 -10.14101718127253 0.8841139843761795 1.017014780349137 1.2655286953780431 0.20299369098449072 0.11189032155621795 0.36210301671161815 0.5617533446637127 0.04808749520094095 0.02097123047427583 7.227412104243755e-11 10.14101718127253 0.24851391502890618 GGSLES(ph)R ddPTM_A549_PD325901_60min_R1 1 GGSLESR 7 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 GGS(0.151)LES(0.849)R 88.294 0.012802000000000001 193750000.0 2934.4 3013.2 2687.6 3105.0 3794.3 2848.7 3185.5 2295.3 2820.1 2895.9 3411.8 True False 3232.298127808894 3267.1329388263193 2869.996697851704 3296.78879803336 3527.8014576243913 2825.5011316834757 3306.7259456724846 2249.518440871985 2701.58100416192 2713.052379782616 2992.1702291821493 1.08025208468583 1.091894073058579 0.9591689235662775 1.1018052268150773 1.1790109477122384 0.9442982568728286 1.105126277048854 0.7518016250989993 0.902883458238385 0.9067172560313105 1.0 11.546976539369858 GGSS(ph)KDLLDNQSQEEQR ddPTM_A549_PD325901_60min_R1 1 GGSSKDLLDNQSQEEQR 17 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 GGS(0.081)S(0.919)KDLLDNQSQEEQR 216.87 6.9064e-56 61739000.0 8441.9 9944.7 8766.7 8655.9 11377.0 9303.3 8944.2 9866.3 11355.0 11119.0 12115.0 True False 9298.915473401687 10782.774769927693 9361.660980449666 9190.555284024784 10577.918768519283 9227.53700929928 9284.576425454043 9669.50890653738 10877.78883807617 10416.944442419592 10624.931803312542 0.8751976620219395 1.0148559039753968 0.8811031594133126 0.8649989905026438 0.9955752153836318 0.8684796458102823 0.8738480959058377 0.9100772678392826 1.0237984619049314 0.9804245933298033 1.0 13.375165960814984 -8.757595243707682 24.91055164646732 1.011238165610745 0.9117089515058406 0.39929338582174323 0.04923309058375733 57.314596512922385 371406.3653022867 0.007906075985762392 0.008800048672705387 1.7474499928290739e-09 8.757595243707682 -0.09952921410490434 GGSSGATGEPGDS(ph)SDREPGRPPGDR ddPTM_A549_MK2206_60min_R1 3 GGSSGATGEPGDSSDREPGRPPGDR 25 2 J3KNZ9;H3BRE6 J3KNZ9 FBRS 1 GGS(0.001)S(0.001)GAT(0.003)GEPGDS(0.498)S(0.498)DREPGRPPGDR;GGSSGATGEPGDS(0.5)S(0.5)DREPGRPPGDR;GGS(0.001)S(0.001)GAT(0.002)GEPGDS(0.498)S(0.498)DREPGRPPGDR 76.237 1.9171000000000002e-06 44221100.0 933.7 1161.9 661.22 901.45 1549.0 723.9399999999999 849.25 792.1800000000001 1550.3400000000001 1462.09 1336.6399999999999 True False 1091.2857332266888 1221.0357471238453 754.9909386906244 1122.3052904676279 1321.1441519478924 800.54685028752 1003.5477321299435 904.4739409495028 1199.190465384251 1131.802853534395 1004.7153986126904 1.0861640368342464 1.2153050991453398 0.7514475638903463 1.1170380109803288 1.3149436683981617 0.7967896693858917 0.9988378136889718 0.9002290023606676 1.1935623431671212 1.1264909994384347 1.0 9.972571177948813 -8.773412208737886 24.99933815812163 1.0914044186678904 1.0245542001273027 0.04735358039241244 0.16394708005339573 716.8047864879047 1496688.2905389117 0.02896369009057512 0.030954036654853766 1.6849530002937901e-09 8.773412208737886 -0.0668502185405877 GGSSGATGEPGDS(ph)SDREPGRPPGDR ddPTM_A549_PD325901_60min_R1 1 GGSSGATGEPGDSSDREPGRPPGDR 25 2 J3KNZ9;H3BRE6 J3KNZ9 FBRS 1 GGSSGATGEPGDS(0.5)S(0.5)DREPGRPPGDR 57.688 0.00046633 45221000.0 137.79 166.01 124.8 143.28 245.77 320.79 224.96 245.21 211.92 347.52 231.63 True False 151.77833936436318 180.0002453121456 133.26967848336528 152.13008018751037 228.50796306047147 318.1775925975855 233.5209759028355 240.3190941864763 203.01373937165138 325.57752789186566 203.1409784235479 0.7471576662779783 0.8860853517050904 0.6560452721926873 0.7488891772014603 1.124873793725821 1.566289554509218 1.149551300358244 1.183016327141106 0.9993736416311276 1.6027171396853184 1.0 7.6663374850716925 -6.757392621289163 24.946934277968367 1.0761303067394472 0.7611901552707725 0.40896104059636285 0.22871794871843773 81.58331358371969 502926.8995879621 0.026924133574995995 0.05447099531382783 1.748265465206952e-07 6.757392621289163 -0.3149401514686747 GGSSVEAPCPSDVT(ph)PEDDR ddPTM_A549_MK2206_60min_R1 2 GGSSVEAPCPSDVTPEDDR 19 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 GGSSVEAPCPS(0.002)DVT(0.998)PEDDR;GGSSVEAPCPS(0.016)DVT(0.984)PEDDR 125.52 9.564e-15 8117200.0 1271.95 1315.3000000000002 1289.5900000000001 1149.25 2004.0500000000002 1187.51 874.4000000000001 939.1 1409.17 1480.75 1851.95 True False 1486.6240638081679 1382.2431518994686 1472.473253419501 1430.8163015917933 1709.2568997489825 1313.1715199946586 1033.2671615830707 1072.2203008731326 1089.9952449820844 1146.247546574461 1392.0597037802047 1.0679312530713798 0.9929481818530637 1.057765877010109 1.02784118935872 1.2278617756892278 0.9433298847949398 0.7422577916573436 0.7702401685512964 0.7830089772889411 0.8234183803049331 1.0 10.443005372645063 -7.513118960121538 24.740745768289905 0.8714670254001352 1.0686395969921223 0.6281914166940065 0.08865677889424924 308.7246151889153 782607.3371858682 0.016764304908533978 0.0257074253350227 3.068181449893916e-08 7.513118960121538 0.1971725715919871 GGSTSSS(ph)PSRR ddPTM_A549_MK2206_60min_R1 2 GGSTSSSPSRR 11 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 GGST(0.003)S(0.019)S(0.139)S(0.839)PS(0.001)RR;GGS(0.011)T(0.032)S(0.125)S(0.14)S(0.66)PS(0.033)RR 78.903 0.00042292 19137200.0 1282.83 1130.08 720.72 455.37 791.55 535.44 672.6 604.97 742.97 1318.9 1612.46 True False 1499.340341817707 1187.5962450380534 822.9289333854194 566.935670442336 675.1140435599445 592.0999054036934 794.8027137245807 690.7263501429227 574.6884812792912 1020.9595739841681 1212.041680367951 1.2370369485664372 0.9798311925028219 0.678960919178617 0.46775261909328564 0.5570056331354825 0.4885144751985295 0.655755265349699 0.5698866312363386 0.4741491077310374 0.842346918031916 1.0 10.243223596530877 -5.551557924696252 2.7049183172777895 0.6751199858947854 1.226020504754286 0.5772910478137669 0.1593393329665515 0.23368415033416867 3.0997714036584734 0.03081155517779646 0.2134285170371433 2.808290787673553e-06 5.551557924696252 0.5509005188595006 GGSTSSS(ph)PSRR ddPTM_A549_PD325901_60min_R1 4 GGSTSSSPSRR 11 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 GGSTSS(0.005)S(0.995)PSRR;GGS(0.011)T(0.067)S(0.067)S(0.057)S(0.652)PS(0.145)RR;GGS(0.001)T(0.004)S(0.028)S(0.205)S(0.759)PS(0.002)RR;GGS(0.002)T(0.007)S(0.029)S(0.127)S(0.797)PS(0.038)RR 101.72 0.00010194 50911300.0 2891.08 2945.38 2089.18 2101.54 2594.6600000000003 2043.7 1446.26 1482.83 2159.3599999999997 3112.44 3507.55 True False 3184.5803132993938 3193.59750941201 2230.9643180599137 2231.347352856369 2412.4200326910636 2027.0567847865743 1501.2982157238382 1453.253792392369 2068.6096085766767 2915.920007227668 3076.1435861914083 1.0352508665703222 1.038182197914247 0.725247133480555 0.7253716513340697 0.7842351844433554 0.6589603924491332 0.4880455588819261 0.4724271646212884 0.6724684822459261 0.9479141416925488 1.0 11.58690713069641 -5.756669551482489 24.489427644654583 0.7632722270384742 1.0367167102603654 0.35074256432801676 0.15751642076440062 101.51263564531081 521164.1429282927 0.026982172741639145 0.09801474374413423 1.751178628838403e-06 5.756669551482489 0.2734444832218912 GGSYVFQSDEGPEPEAEES(ph)DLDSGSVHSASGRPDGPVRTK ddPTM_A549_PD325901_60min_R1 1 GGSYVFQSDEGPEPEAEESDLDSGSVHSASGRPDGPVRTK 40 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5;I3L1I4;A0A5F9ZHM2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 GGSYVFQSDEGPEPEAEES(0.626)DLDS(0.05)GS(0.05)VHS(0.05)AS(0.05)GRPDGPVRT(0.173)K 51.145 0.0011514000000000001 6733700.0 774.06 638.41 938.05 741.26 607.35 1008.3 816.22 1197.7 1015.0 755.67 1045.2 True False 852.6420013671456 692.21105120009 1001.711713952891 787.045946676395 564.6918312437537 1000.0887391007989 847.2816987527223 1173.8109339225266 972.3430797575791 707.9568672365508 916.6470260686974 0.9301748406078885 0.7551555086245518 1.0927998296672796 0.858613974947223 0.6160406516187543 1.0910292737106944 0.924327112461742 1.2805484559926519 1.0607606331607817 0.7723331305320719 1.0 9.840222490908934 GGT(ph)PAGSAR ddPTM_A549_MK2206_60min_R1 1 GGTPAGSAR 9 0 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GGT(1)PAGSAR 89.04700000000001 0.0011671 37386000.0 664.6 817.49 695.95 468.08 945.71 460.37 308.1 483.02 647.04 950.55 1076.7 True False 776.7682320900257 859.0967492178947 794.6461749217204 582.7596210129099 806.5973117744619 509.08604783112656 364.077781889003 551.4895641867109 500.4864731105598 735.8200948143541 809.3256745917248 0.9597721368247422 1.0614969673997772 0.9818620610579176 0.7200557690288162 0.9966288443541109 0.6290249572126102 0.4498532461269895 0.6814185951346684 0.6183993524770321 0.9091767602523526 1.0 9.660576553210616 -6.19341225758931 5.555178564307458 0.773603091008397 1.0114133093943545 0.31672970313126214 0.16130951125508133 0.26544829919211155 15.732317881910921 0.02728641433909893 0.0735063015380615 6.406011919524665e-07 6.19341225758931 0.2378102183859575 GGT(ph)PAGSAR ddPTM_A549_PD325901_60min_R1 2 GGTPAGSAR 9 0 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GGT(0.877)PAGS(0.123)AR;GGT(1)PAGSAR 128.91 5.3821000000000005e-05 71394000.0 3772.5 3243.3 2903.61 2683.64 3694.3 2582.2 2146.73 2317.31 2869.41 3116.9 3839.8 True False 4155.481422832285 3516.62427336234 3100.6664354253544 2849.402347811351 3434.825112643122 2561.17141932568 2228.4249848857303 2271.089434155472 2748.8186763420645 2920.098402066518 3367.528942497689 1.2339853624985249 1.0442744022131751 0.9207542053448832 0.8461404182314036 1.0199838431367778 0.7605491929123747 0.6617389257634448 0.6744082895605376 0.8162717301854194 0.8671338693530832 1.0 11.717474629761233 -5.269710979718143 1.2278213534196312 0.8679495395684317 1.4048663370609096 0.5414530639515858 0.11089616354362106 1.1236610598170285 1.4063604592920795 0.019664884970994213 0.7605421996762565 5.373893066443931e-06 5.269710979718143 0.5369167974924779 GGTMTDLDEQEDES(ph)METTGKDEDENSTGNKGEQTK ddPTM_A549_PD325901_60min_R1 2 GGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTK 35 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 GGT(0.011)MT(0.061)DLDEQEDES(0.308)MET(0.308)T(0.308)GKDEDENS(0.002)T(0.002)GNKGEQTK;GGT(0.001)MT(0.003)DLDEQEDES(0.332)MET(0.332)T(0.332)GKDEDENSTGNKGEQTK 62.802 0.0031265 26800000.0 1971.8600000000001 2018.54 1572.8 1960.23 2165.69 2238.99 2067.7599999999998 1879.9299999999998 2117.29 2496.1 2134.14 True False 2172.041775593391 2188.649449866745 1679.5396660147196 2081.308955094665 2013.5794056249028 2220.7564077747684 2146.4497383216894 1842.4333213734442 2028.3076643743102 2338.4958200129104 1871.6543094281 1.1604930272925649 1.1693662867345975 0.8973557016134658 1.1120156882659742 1.0758286909510384 1.186520607244689 1.1468195422142646 0.9843876147921864 1.0836978036793967 1.2494272089846856 1.0 10.870098281480974 -10.732530045905724 0.3958173080741828 0.9717030799779889 1.0968250267698412 0.0 0.1099880552012636 3.662576581460337 0.72243411219047 0.19166060408672544 0.02585093813599261 1.8512708128347536e-11 10.732530045905724 0.1251219467918523 GGTMTDLDEQEDESMETTGKDEDENS(ph)TGNKGEQTK ddPTM_A549_MK2206_60min_R1 1 GGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTK 35 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 GGTMTDLDEQEDES(0.026)MET(0.026)T(0.026)GKDEDENS(0.776)T(0.138)GNKGEQT(0.007)K 53.744 0.014740000000000001 16238000.0 1298.9 1059.7 931.27 833.7 1251.3 829.94 867.72 1055.5 1019.3 1111.0 948.24 True False 1518.122564943929 1113.634203655339 1063.3380894020415 1037.956537426215 1067.2354275870866 917.7636999304151 1025.3734920503912 1205.120357333182 788.4301774876259 860.0243283769893 712.7658379073633 2.1299036572811114 1.5624124283578187 1.4918477189141623 1.4562377743489945 1.497315627135588 1.2876089889842546 1.4385839465326014 1.6907661580293203 1.1061559569162411 1.2066014988905303 1.0 9.477284381484848 -2.0000000000567537 0.1210736583914999 0.7844365970480278 4.22713594905831 0.562095410211425 0.1937282722726501 34.97120006563834 0.28000503242461144 0.6555659774881459 20.463468882147346 0.009999999998693198 2.0000000000567537 3.442699352010282 GGTMTDLDEQEDESMETTGKDEDENS(ph)TGNKGEQTK ddPTM_A549_PD325901_60min_R1 3 GGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTK 35 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 GGTMTDLDEQEDESMETTGKDEDENS(0.827)T(0.173)GNKGEQTK;GGTMTDLDEQEDESMETTGKDEDENS(0.855)T(0.145)GNKGEQTK;GGTMTDLDEQEDESMETTGKDEDENS(0.834)T(0.164)GNKGEQT(0.002)K 159.41 1.6704e-50 66091200.0 5933.799999999999 6442.799999999999 5568.7 6130.400000000001 7326.5 5610.200000000001 5545.2 5328.33 6739.6 6684.8 6390.400000000001 True False 6536.19500776732 6985.757367008567 5946.625469313429 6509.060884851439 6811.911915052873 5564.512391255885 5756.225620449868 5222.052278155977 6456.358049590325 6262.720587164896 5604.421312083239 1.1662568967959563 1.2464725576478592 1.0610596773822822 1.1614153402096627 1.2154532173315131 0.9928790291441313 1.0270865268532428 0.9317736814141957 1.1520115441125551 1.117460704401782 1.0 12.452349699032885 -7.2575891721921275 24.937291597818813 1.0531309523815053 1.16782892482401 0.4568227575240176 0.07114067965330449 300.0976401036964 1943689.0935031644 0.01187820839189061 0.020071369686564016 5.5259993285167255e-08 7.2575891721921275 0.11469797244250457 GGTPAFLPSSLS(ph)PQSSLPASR ddPTM_A549_MK2206_60min_R1 2 GGTPAFLPSSLSPQSSLPASR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;A0A087WVI1;E5RGS7;H0YBP7;B3KPU0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 GGTPAFLPS(0.048)S(0.048)LS(0.897)PQS(0.005)S(0.001)LPASR;GGTPAFLPSS(0.003)LS(0.992)PQS(0.002)S(0.002)LPASR 131.11 1.7046e-17 10494600.0 703.44 1652.8000000000002 1637.1799999999998 1384.63 2656.3 1193.47 1572.0 1930.84 2900.8999999999996 2263.4 2194.0 True False 822.163474543196 1736.9204603204166 1869.3567420911602 1723.8644121584036 2265.5617887793314 1319.7622032387317 1857.61205170241 2204.542482949504 2243.8507817853974 1752.0963680004304 1649.169248680455 0.4985318973180171 1.0532093426494422 1.133514188181039 1.0452926002214231 1.373759418926874 0.8002587995711836 1.126392608392823 1.336759392471948 1.360594604574857 1.0624114956074582 1.0 10.687523749963939 -5.142399435243029 2.028060781960818 1.1615048613483345 0.15200350725746356 0.5489861410658392 0.16453127430093814 0.6668212174450461 2.2373678209357246 0.02534393642255039 1.3777231984794345 7.204445572814848e-06 5.142399435243029 -1.009501354090871 GGTPAFLPSSLS(ph)PQSSLPASR ddPTM_A549_PD325901_60min_R1 3 GGTPAFLPSSLSPQSSLPASR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;A0A087WVI1;E5RGS7;H0YBP7;B3KPU0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 GGTPAFLPS(0.004)S(0.146)LS(0.847)PQS(0.002)S(0.001)LPASR;GGTPAFLPS(0.036)S(0.239)LS(0.725)PQSSLPASR;GGTPAFLPS(0.029)S(0.029)LS(0.66)PQS(0.13)S(0.13)LPAS(0.023)R 133.93 1.1961e-17 19062370.0 3793.07 3328.9399999999996 3937.2999999999997 3543.2900000000004 4416.23 4585.04 4054.8999999999996 4107.68 4387.92 4065.3500000000004 4698.52 True False 4178.139674089449 3609.4814567159456 4204.508854908284 3762.150975904548 4106.049239966414 4547.700954405164 4209.21143842642 4025.7490999873808 4203.510981802836 3808.663107203029 4120.631826372268 1.0139560752186418 0.8759533995769939 1.0203553804538417 0.9130034262771494 0.9964610799944501 1.1036416612859297 1.0214966092061992 0.976973743255189 1.020113215381228 0.924291047510573 1.0 12.008649850926563 -6.985432545278879 23.650725734521068 1.015338938889452 0.9547235947163764 0.15582543766538226 0.05528135091869391 125.21028981056149 203280.2090351785 0.006396653928741953 0.012083489163531077 1.0341117069830276e-07 6.985432545278879 -0.06061534417307568 GGTPAGS(ph)ARGS(ph)PTRPNPPVR ddPTM_A549_MK2206_60min_R1 1 GGTPAGSARGSPTRPNPPVR 20 2 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 2 GGT(0.106)PAGS(0.893)ARGS(0.533)PT(0.469)RPNPPVR 48.388999999999996 0.0052213 6311500.0 863.0 742.16 792.04 729.5 1138.8 615.07 703.12 739.86 1092.2 1317.6 1220.1 True False 1008.6533016757338 779.9327739783399 904.3631818162222 908.2275327484996 971.2840285592376 680.1562991495772 830.8678026673023 844.7374207262222 844.818443885005 1019.9532448870582 917.1154969530643 1.0998105527894642 0.850419360014647 0.986095191740616 0.9903087841890218 1.0590640238728248 0.7416255656013475 0.9059576524741944 0.9210807401387241 0.9211690857822684 1.1121317307096565 1.0 9.840959620856673 -5.234128583420808 23.1725210048373 0.9460754633311887 1.0998111340722605 0.17037324255517716 0.09563732586834994 3888.5733801109204 3299216.817700042 0.011040224975440232 1.1482739167288174 5.832723867614703e-06 5.234128583420808 0.15373567074107175 GGTPAGS(ph)ARGS(ph)PTRPNPPVR ddPTM_A549_PD325901_60min_R1 1 GGTPAGSARGSPTRPNPPVR 20 2 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 2 GGT(0.156)PAGS(0.783)ARGS(0.844)PT(0.217)RPNPPVR 40.104 0.031573000000000004 9110600.0 1662.9 1535.9 1610.1 1435.1 1434.1 1665.7 1450.9 1799.2 1518.9 1841.0 1920.1 True False 1831.7163838377203 1665.3356832415193 1719.3710683178404 1523.7428676514253 1333.3737633764176 1652.1350914610748 1506.114793462945 1763.313544554905 1455.0659151170314 1724.7589458129737 1683.9398725167475 1.087756406112121 0.9889519871945172 1.0210406537545422 0.904867740541176 0.7918179176929945 0.9811128760742872 0.8943993892204521 1.0471356925111162 0.8640842460380427 1.0242402201898217 1.0 10.717624910494793 -6.218222580147658 7.724456544214335 0.9308328724100319 1.0286923636866478 0.2373949482780472 0.07414251388491509 0.3172775651617842 50.58816588289302 0.010281945981381019 0.02719672880384689 6.050307111533602e-07 6.218222580147658 0.09785949127661597 GGTRAT(ph)AGPR ddPTM_A549_MK2206_60min_R1 4 GGTRATAGPR 10 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 GGTRAT(1)AGPR;GGT(0.001)RAT(0.999)AGPR;GGTRAT(1)AGPR;GGT(0.013)RAT(0.987)AGPR 93.01100000000001 0.00024079 194373000.0 4905.3 4896.76 5230.7 3577.68 5210.1 2747.2 3019.84 3323.0200000000004 5290.0 7615.799999999999 7790.5 True False 5733.19471692929 5145.984168246973 5972.491913446431 4454.2117606081565 4443.701191777738 3037.9068805562265 3568.505838557891 3794.068261321941 4091.8234463941358 5895.385490597188 5855.903843138142 0.9790452286280894 0.8787685566724184 1.0199094919300808 0.7606360828188006 0.758841215773172 0.5187767698945397 0.6093860032793078 0.6479048090531356 0.6987518162868865 1.0067421953154696 1.0 12.515676148706394 -6.2711129468612965 24.25697085172224 0.7856977850721297 0.9511938400606547 0.26520509450421326 0.14639845632994367 645.0594879319506 1617522.0755467473 0.024857684507783844 0.058478955676912324 5.356573311237595e-07 6.2711129468612965 0.16549605498852493 GGTRAT(ph)AGPR ddPTM_A549_PD325901_60min_R1 4 GGTRATAGPR 10 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 GGT(0.001)RAT(0.999)AGPR;GGT(0.006)RAT(0.994)AGPR;GGT(0.002)RAT(0.998)AGPR;GGT(0.007)RAT(0.993)AGPR 92.19 0.0002476 295963000.0 3324.12 4707.02 4076.7100000000005 4283.049999999999 4642.34 4519.51 3703.1000000000004 5006.8 4822.889999999999 4883.43 5481.7 True False 3661.582215312192 5103.697094688128 4353.380055848719 4547.604270987693 4316.278053603569 4482.704608998763 3844.023496914072 4906.935446241386 4620.200705351754 4575.089396388626 4807.485651359333 0.7616418395917348 1.0616146286874597 0.9055419759012252 0.9459423492406768 0.89782442769915 0.9324426392684632 0.7995912574023307 1.020686446532385 0.9610430566850212 0.9516595010730824 1.0 12.231066836300348 GGTSQVGS(ph)PTLLSPAVPSK ddPTM_A549_MK2206_60min_R1 1 GGTSQVGSPTLLSPAVPSK 19 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 GGTS(0.001)QVGS(0.685)PT(0.313)LLSPAVPSK 112.82 1.6484e-10 2168800.0 877.95 922.2 931.64 1256.5 1416.9 862.95 911.43 1142.8 1408.7 1222.8 1467.2 True False 1026.1264961833265 969.1360409653242 1063.7605609656896 1564.342556406428 1208.4758869560799 954.2667962201505 1077.025033258987 1304.795399678219 1089.6316992316479 946.5686307285175 1102.8537473400013 0.9304284440781608 0.8787530017491495 0.9645527011459122 1.4184496903415365 1.0957716649835312 0.8652704844334699 0.9765801094267383 1.1831082796112227 0.9880110593628176 0.8582902610718497 1.0 10.107025768268437 GGTSQVGS(ph)PTLLSPAVPSK ddPTM_A549_PD325901_60min_R1 2 GGTSQVGSPTLLSPAVPSK 19 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 GGTSQVGS(0.845)PT(0.155)LLSPAVPSK;GGTSQVGS(0.943)PT(0.056)LLS(0.001)PAVPSK 172.66 3.5727999999999996e-34 8741900.0 2988.1 3114.1 3174.8 3289.3 3701.3 3866.8 3629.7 3686.3 3652.3999999999996 3304.9 3686.5 True False 3291.4497122770426 3376.5361359349004 3390.2610196233027 3492.472590457689 3441.3334567918114 3835.3100628334523 3767.830219748053 3612.7738546535957 3498.902329563134 3096.2280499822396 3233.0838706489194 1.0180526840512827 1.0443701032900172 1.0486152402049613 1.0802295053845006 1.064412058107572 1.1862698947131423 1.1653982298305807 1.117438952775595 1.0822182379267697 0.9576701916368129 1.0 11.658695218108086 -4.357849825769842 16.28013633422626 1.0641326804671538 1.0739328260620973 0.0 0.06522828526345935 0.0 0.0 0.008848322879912138 0.0 4.386823630623342e-05 4.357849825769842 0.009800145594943466 GGTSQVGSPT(ph)LLSPAVPSK ddPTM_A549_MK2206_60min_R1 1 GGTSQVGSPTLLSPAVPSK 19 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 GGT(0.004)S(0.023)QVGS(0.341)PT(0.632)LLSPAVPSK 148.15 7.7537e-21 2584900.0 981.66 973.79 1096.3 1359.8 1572.1 1136.0 1147.4 1353.2 2089.6 1329.8 1474.6 True False 1147.340208717266 1023.3517516066172 1251.7718249395537 1692.9510610437414 1340.8461725482778 1256.2107659842288 1355.867727813834 1545.0202440011947 1616.3089364055172 1029.3972564137896 1108.416123110391 1.0351168525929124 0.9232559237183687 1.1293338294528628 1.5273605514624353 1.2096956590505479 1.1333385898962771 1.223247929675594 1.3938991068314879 1.4582149273234122 0.9287101071077332 1.0 10.114283886305195 -5.993544765747518 11.56468044940797 1.2470206996199542 0.9907670123421475 0.24259766684899187 0.1728148434850687 0.30236310938139 503.8539882870941 0.026169299095490307 0.07926109039141652 1.0149747406871236e-06 5.993544765747518 -0.25625368727780673 GGTTSWGTSGQPS(ph)PSYDSSR ddPTM_A549_MK2206_60min_R1 1 GGTTSWGTSGQPSPSYDSSR 20 0 Q99081;Q99081-3;H0YNQ5 Q99081 TCF12 Transcription factor 12 1 GGTTSWGT(0.002)S(0.002)GQPS(0.995)PSYDSSR 141.13 8.7451e-21 5687300.0 1846.0 1727.9 1752.8 1700.3 3141.8 2568.5 1960.1 1808.1 3527.8 3249.7 3238.9 True False 2157.5596696331445 1815.8427295423794 2001.3733966560703 2116.8735763293666 2679.645381917292 2840.2969651676885 2316.22479805464 2064.4037120740177 2728.758932738986 2515.5905129853304 2434.5917409075328 0.8862100504903873 0.7458510184814375 0.8220570878590209 0.8694983806772746 1.1006549216824384 1.1666419948130289 0.9513811942823852 0.8479465683656999 1.1208281400485642 1.0332699609206775 1.0 11.249464150296284 -6.637543974121496 4.747588759855488 1.0447898003628777 0.8160350526217581 0.5508081562192789 0.08725719293559776 0.1214278270057007 4.534897250551868 0.01349883664596646 0.028681003469526303 2.3038596888755942e-07 6.637543974121496 -0.2287547477411196 GGTTSWGTSGQPS(ph)PSYDSSR ddPTM_A549_PD325901_60min_R1 2 GGTTSWGTSGQPSPSYDSSR 20 0 Q99081;Q99081-3;H0YNQ5 Q99081 TCF12 Transcription factor 12 1 GGTTSWGT(0.003)S(0.003)GQPS(0.988)PS(0.007)YDSSR;GGTTSWGTSGQPS(0.95)PS(0.049)YDSSR 159.95 6.8699e-27 19890100.0 3635.6 4462.700000000001 3143.6000000000004 3531.0 3680.5 4324.1 3677.3 3408.7 4127.6 4290.2 5751.6 True False 4004.6834356127356 4838.787390847014 3356.943600002462 3749.101850517164 3421.9943770357036 4288.885963250784 3817.24166379577 3340.7108044265797 3954.131326115649 4019.316039829889 5044.189662396399 0.7939200751048259 0.9592794313265764 0.6655070139467439 0.7432515629747428 0.6784031937867258 0.8502626289458781 0.7567601377586326 0.6622888963377065 0.7838982256343461 0.7968209581398626 1.0 12.30040680692903 -10.387628470776143 0.790774321157201 0.9981129447037757 0.7653112267152171 0.0968798504413737 0.10091496060624927 0.3962752852624923 0.45678790780168244 0.05243310866732611 0.016430595677447857 4.096109228782295e-11 10.387628470776143 -0.23280171798855853 GGTVS(ph)PPPGTSR ddPTM_A549_MK2206_60min_R1 2 GGTVSPPPGTSR 12 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 GGT(0.002)VS(0.998)PPPGTSR;GGT(0.088)VS(0.911)PPPGT(0.001)SR 83.226 0.0005831 15017000.0 3643.3 3457.6 3201.6000000000004 2672.5 3675.9 2825.8 2289.7 2873.2 4032.0 4893.7 5769.0 True False 4258.199969866977 3633.577071396338 3655.6350220984004 3327.2626199730844 3135.179979435285 3124.824280385772 2705.708851643136 3280.484898805968 3118.758437780936 3788.209771177744 4336.3980836998835 0.981967035239028 0.8379251630643911 0.8430118618121321 0.7672871714614843 0.7229917362107816 0.7206036484822959 0.6239530595250569 0.7564999419995607 0.7192048279663389 0.8735844122377214 1.0 12.082281487621799 -10.779864425136452 1.0132006800148528 1.0007936220836602 0.7681867611870314 0.2737063760096471 0.09417757747910463 0.39022571650054605 0.7072513012087209 0.06510483400870501 0.016192593244921862 1.6601050659698638e-11 10.779864425136452 -0.23260686089662874 GGTVS(ph)PPPGTSR ddPTM_A549_PD325901_60min_R1 2 GGTVSPPPGTSR 12 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 GGT(0.011)VS(0.975)PPPGT(0.006)S(0.008)R;GGT(0.189)VS(0.81)PPPGTSR 83.573 0.00055379 23798000.0 5866.700000000001 6635.0 6245.3 5506.7 6865.8 7127.0 6117.4 7177.0 7053.6 6755.0 8057.1 True False 6462.283065163727 7194.154735534528 6669.143614039757 5846.836352376909 6383.569893724151 7068.960074949319 6350.201004569723 7033.849104752423 6757.161721554741 6328.488147184488 7066.12777816504 0.9145437597566172 1.018118403939015 0.9438187113807935 0.8274456018817197 0.9034042539465459 1.000400827280966 0.8986818812125654 0.9954319148441724 0.9562750538470263 0.8956090727286417 1.0 12.786704122661988 -8.274389251000873 24.59873108612583 0.9799811681129009 0.9312472344904188 0.03777283255033148 0.055347243976251924 850.3318090112876 1615232.0683504224 0.008368487503615343 0.010149882572241697 5.316315530499905e-09 8.274389251000873 -0.04873393362248213 GGVADALLYR ddPTM_A549_MK2206_60min_R1 1 GGVADALLYR 10 0 D6R9C3;D6RIE3;D6RGV5;H0UI06;P14406 D6R9C3 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial 0 57.177 0.03798 1301200.0 789.0 920.74 877.91 889.72 859.45 958.37 730.48 1241.2 1303.9 1228.2 1038.1 False True 922.1639108020319 967.6017332014882 1002.4108390337345 1107.7014399410484 733.0260435065309 1059.78407728548 863.1987605137257 1417.1439010155814 1008.5687319004377 950.7487669780546 780.3111198975297 1.1817900415453906 1.2400204335529057 1.2846296989403034 1.419563827421185 0.9394022779052433 1.3581558051161062 1.1062238362399357 1.8161267536488273 1.2925212856544743 1.2184226813311423 1.0 9.607905649185618 -10.456206800782592 1.0608042293780429 1.0178830403036392 1.2909511487895573 0.0701359733595246 0.21529132400813553 0.5551226564317682 1.2084255906630172 0.09545597598128953 0.036001390941147675 3.4977857106647914e-11 10.456206800782592 0.2730681084859181 GGVADALLYR ddPTM_A549_PD325901_60min_R1 1 GGVADALLYR 10 0 D6R9C3;D6RIE3;D6RGV5;H0UI06;P14406 D6R9C3 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial 0 77.923 0.0037884999999999998 2104700.0 1229.0 979.85 1208.8 1361.0 1418.7 1408.4 1281.5 1404.6 1448.0 1208.4 1440.2 False True 1353.7671752580188 1062.4253982838738 1290.8364371049033 1445.0658789447343 1319.055406249302 1396.9304573535314 1330.2681837637078 1376.5841511126164 1387.1455955556405 1132.1014177731656 1263.0645301800007 1.0718115685388552 0.8411489459944429 1.0219877181737855 1.1440950516905073 1.0443293867664243 1.1059850260813304 1.0532068251288236 1.0898763429897267 1.098238104555083 0.8963132054795558 1.0 10.302712633203589 -5.989433701583494 24.994376357522953 1.061038694492215 0.9502522446428422 0.17743251561392803 0.07920909289776872 181.5994271023333 429563.1411997535 0.008443848080841395 0.026218669476450563 1.0246281858006786e-06 5.989433701583494 -0.1107864498493728 GGVADS(ph)RELKPMASGASSA ddPTM_A549_PD325901_60min_R1 2 GGVADSRELKPMASGASSA 19 2 Q8WWI5 Q8WWI5 SLC44A1 Choline transporter-like protein 1 1 GGVADS(0.998)RELKPMAS(0.002)GASSA;GGVADS(0.994)RELKPMAS(0.006)GASSA 80.786 7.975300000000001e-05 24434900.0 14534.6 15240.900000000001 15425.900000000001 16164.4 17164.3 16064.1 16627.1 16584.7 16676.7 18079.800000000003 18633.5 True False 16010.141892193 16525.304130943212 16472.794337472315 17162.83827598403 15958.738781620423 15933.279295635384 17259.853389198226 16253.905148054542 15975.836293786428 16938.23834248204 16341.697627488582 0.979711059226927 1.011235460821756 1.008022221006171 1.0502481851771752 0.9765655408270448 0.9750075946108443 1.0561848458244143 0.9946277013909275 0.9776117915015919 1.03650420712656 1.0 13.996270242564346 -8.50606344777709 24.80816091249677 0.9892536805284007 1.008672008144723 0.0 0.029356005308877872 1131.2404175734446 1668959.1066486551 0.004198734902008596 0.005018207678780845 3.1184339666153987e-09 8.50606344777709 0.01941832761632223 GGVEVLESCQGSSNGAQDQEASEQFGS(ph)PVAER ddPTM_A549_MK2206_60min_R1 2 GGVEVLESCQGSSNGAQDQEASEQFGSPVAER 32 0 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 GGVEVLESCQGSS(0.001)NGAQDQEAS(0.007)EQFGS(0.992)PVAER;GGVEVLESCQGSSNGAQDQEAS(0.073)EQFGS(0.927)PVAER 97.605 4.3342999999999997e-10 9480700.0 1071.6 1350.4 1371.45 1296.17 2401.56 1340.95 1596.46 1516.3600000000001 1993.9700000000003 2362.13 2206.01 True False 1252.459881895384 1419.1295919752467 1565.9422323390966 1613.7317081872818 2048.293705327295 1482.8484389494308 1886.5161170870426 1731.308673657739 1542.338978715788 1828.5231924294662 1658.1968342213167 0.755314360784879 0.8558269818683286 0.9443645048776477 0.9731846514741926 1.2352536581033615 0.894253570111157 1.137691303079193 1.044091170558021 0.9301302154759359 1.1027178165420477 1.0 10.69539955500603 -5.622030185045107 1.7769953123929014 0.9976329689721817 0.7477233600120711 0.4321725924648282 0.09795095175215315 0.3665009864039534 1.83628327747478 0.013234774575672938 0.12125699484506966 2.3876453271169054e-06 5.622030185045107 -0.2499096089601106 GGVPGT(ph)PSTQSLGSR ddPTM_A549_MK2206_60min_R1 1 GGVPGTPSTQSLGSR 15 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6;S4R3I2;M0R0J9 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 GGVPGT(0.862)PS(0.116)T(0.022)QSLGSR 113.65 1.2556e-06 11498000.0 3492.4 3198.2 2822.5 3210.0 4887.8 3456.9 3548.1 3053.7 4994.2 4849.6 4793.0 True False 4081.8317390177663 3360.974719383322 3222.7729416144207 3996.4501441023776 4168.811094829511 3822.7068634954935 4192.743842649698 3486.571326564032 3863.021674098601 3754.0719918065224 3602.765819929541 1.1329717064701126 0.932887366919966 0.8945274554862542 1.1092728042425293 1.1571140904492758 1.0610478322929837 1.163756972339572 0.9677485301090756 1.0722377937331908 1.0419972264197679 1.0 11.814889164179707 -4.917140316473121 18.483285641913948 1.0390707508535881 4.325983606053268 0.09487046518792042 0.08245212344480371 322.6288330701219 74580.45668323377 0.011156431628020998 1591.4092411480076 1.2102070638286584e-05 4.917140316473121 3.28691285519968 GGVPGT(ph)PSTQSLGSR ddPTM_A549_PD325901_60min_R1 1 GGVPGTPSTQSLGSR 15 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6;S4R3I2;M0R0J9 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 GGVPGT(0.707)PS(0.186)T(0.105)QS(0.002)LGSR 102.29 7.0662e-06 15080000.0 3870.0 4573.8 4976.4 4414.2 4802.5 5071.6 4614.2 4866.8 4432.2 4686.3 4917.9 True False 4262.879551056574 4959.250177752496 5314.128429524193 4686.855108624428 4465.188967725571 5030.298571083624 4789.795905987122 4769.72785606926 4245.930047390683 4390.406218231039 4313.02947713667 0.9883724592317442 1.1498298826941564 1.2321103896215733 1.0866735628563182 1.035279028672421 1.1663028499455408 1.1105409623045208 1.105888072723255 0.9844426220359309 1.0179402300643996 1.0 12.074485860779381 -8.744866952195615 7.705616939923703 0.9926056726025599 1.1137043216831606 0.3794431784325163 0.06142785569401369 0.10411183040207264 30.87040592212875 0.010180703731693221 0.011356663080698293 1.7994220906561763e-09 8.744866952195615 0.12109864908060064 GGVPGTPS(ph)TQSLGSR ddPTM_A549_MK2206_60min_R1 1 GGVPGTPSTQSLGSR 15 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6;S4R3I2;M0R0J9 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 GGVPGT(0.225)PS(0.619)T(0.153)QS(0.003)LGSR 121.18 5.210300000000001e-07 9934600.0 2233.9 2880.1 2971.2 2256.2 3762.9 3075.6 2565.2 2650.8 4647.0 4303.6 4597.0 True False 2610.927706388668 3026.684788098273 3392.560837599563 2808.9691012846674 3209.382394683488 3401.0579505819487 3031.263635513374 3026.5590177345302 3594.4619197341312 3331.413771019993 3455.4380292543533 0.7555996328928748 0.8759192792560078 0.9818034092573906 0.8129125967542856 0.9287917675016266 0.9842624644945118 0.877244392708003 0.8758828814498026 1.0402333623994344 0.9641075148260947 1.0 11.75465289037755 -2.0000000002339187 0.17025208076570497 1.0408262403822988 0.0795583834105308 0.3596342698676188 0.06607304516238992 34.15743169917943 0.34701439784757027 0.08368068346839694 8.453285083313473 0.009999999994613824 2.0000000002339187 -0.961267856971768 GGVRT(ph)PVPPR ddPTM_A549_MK2206_60min_R1 2 GGVRTPVPPR 10 1 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 GGVRT(1)PVPPR;GGVRT(1)PVPPR 117.2 2.9789000000000002e-05 70627000.0 4079.0 4721.3 4329.8 3730.6000000000004 5502.5 4130.9 3976.0 4482.2 5914.3 6284.200000000001 6568.0 True False 4767.435478024703 4961.594003697229 4943.830746714657 4644.597167472998 4693.089539117675 4568.0290961305045 4698.387733822384 5117.565576161807 4574.720493196381 4864.594855433553 4936.984332421708 0.9656574048081216 1.004984757823497 1.0013867603848745 0.9407761610607974 0.9505984267152013 0.9252670838211426 0.9516715908874909 1.0365772365438153 0.9266224450326281 0.985337308746806 1.0 12.26941435133855 -5.301241040685884 0.0010902951559041785 1.9273378839388404 1.0606470490067438e-05 0.0 0.0347206923101615 3987625.457802986 655.2173775600781 574373.9668388333 583892.6897003539 4.997570844663832e-06 5.301241040685884 -1.9273272774683503 GGVRT(ph)PVPPR ddPTM_A549_PD325901_60min_R1 2 GGVRTPVPPR 10 1 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 GGVRT(1)PVPPR;GGVRT(1)PVPPR 98.105 0.00019857 99430000.0 3955.7 3771.0 3974.5 3697.2 5023.7 4396.2 4071.5 4482.2 4733.7 4366.9 4556.1 True False 4357.279751967573 4088.795404325651 4244.2334706100555 3925.5676470495773 4670.852642824146 4360.398804755462 4226.443160510286 4392.799004782123 4534.759050885176 4091.173188740185 3995.728583497505 1.0904844162747407 1.0232915772138567 1.0621926344394073 0.9824410154539288 1.1689614410035072 1.091265013035184 1.0577403024734062 1.0993737219601283 1.134901672154081 1.0238866587777933 1.0 11.964242873663057 GGVTGS(ph)PEASISGS(ph)KGDLK ddPTM_A549_MK2206_60min_R1 2 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 GGVT(0.033)GS(0.958)PEAS(0.068)IS(0.215)GS(0.726)KGDLK;GGVT(0.144)GS(0.856)PEAS(0.016)IS(0.219)GS(0.765)KGDLK 83.09 4.4337e-05 15864800.0 4124.7 4473.2 4643.6 4402.2 6193.9 4752.9 4342.2 4825.0 7256.6 7108.5 7647.7 True False 4820.848520766973 4700.86677341801 5302.1323052898915 5480.739197622266 5282.7855150097175 5255.84872328032 5131.1215336528 5508.958525942778 5612.991686409018 5502.684912932336 5748.565024217643 0.8386177246769634 0.8177461250962851 0.9223401462718064 0.9534099683195586 0.9189746471953117 0.9142888183639568 0.8925917184612738 0.9583189026712844 0.9764161425960253 0.9572275671842522 1.0 12.488986155360381 -2.000000000006977 0.16113445452893624 1.0165589674867108 0.2929249818018697 0.641133451424182 0.03197621985431858 21.367056851530393 0.20970816036735637 0.04525115912174008 3.711733155740496 0.009999999999839347 2.000000000006977 -0.723633985684841 GGVTGS(ph)PEASISGS(ph)KGDLK ddPTM_A549_PD325901_60min_R1 2 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 GGVT(0.028)GS(0.972)PEAS(0.072)IS(0.253)GS(0.675)KGDLK;GGVT(0.022)GS(0.978)PEAS(0.004)IS(0.273)GS(0.724)KGDLK 105.03 4.8533e-10 42135000.0 8179.6 9383.4 9419.9 8644.6 11719.7 10499.3 10188.3 10773.0 9773.6 9667.0 9828.7 True False 9009.986970496737 10174.172049045166 10059.191060460354 9178.557308688944 10896.548702770096 10413.79718183182 10576.02133175168 10558.124063744997 9362.849580609536 9056.623970219463 8619.832209262726 1.0452624542754738 1.1803213568487068 1.1669822354141555 1.0648185586287655 1.2641253841415672 1.2081206372719564 1.226940510557371 1.2248642209530964 1.0861985887089978 1.0506728843848454 1.0 13.073444071236253 -9.186938199302057 1.6666781289859256 1.0272588615846847 1.1742277251856794 0.42203020740156827 0.0657274021748995 0.2042415634003017 1.1714859770965669 0.01413760002450572 0.012975107236322654 6.502222112687575e-10 9.186938199302057 0.1469688636009947 GGVTGS(ph)PEASISGSK ddPTM_A549_MK2206_60min_R1 2 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.078)GS(0.922)PEASISGSK;GGVTGS(0.988)PEAS(0.011)ISGSK 298.79 6.574999999999998e-124 969490000.0 19984.8 21517.4 21503.1 19471.4 27948.0 20792.0 19341.6 21249.3 30413.0 27828.6 30841.0 True False 23357.745658550644 22612.543751753685 24552.56291969143 24241.893874104353 23836.886222491732 22992.195639387402 22855.71835827439 24261.453348252 23524.504059581257 21542.09993219792 23182.328531701856 1.007566846730211 0.9754215898041049 1.0591068488273634 1.0457057340445133 1.0282352003550794 0.9917983695186423 0.9859112438605627 1.0465494574919183 1.0147601880204344 0.9292465984484294 1.0 14.500737863599568 -7.229560742748035 24.45199840414336 1.007727524390424 1.0237968254543426 0.08513767764279445 0.03418576591354041 1071.334806879063 821747.8534063335 0.0037320765882196193 0.0064638755861472375 5.8943952913605495e-08 7.229560742748035 0.016069301063918573 GGVTGS(ph)PEASISGSK ddPTM_A549_PD325901_60min_R1 6 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.024)GS(0.976)PEASISGSK;GGVT(0.002)GS(0.997)PEAS(0.001)ISGSK;GGVT(0.014)GS(0.976)PEAS(0.008)IS(0.001)GSK;GGVTGS(1)PEASISGSK;GGVT(0.001)GS(0.99)PEAS(0.009)ISGSK;GGVT(0.13)GS(0.869)PEASISGSK 260.5 1.4010999999999998e-77 2385030600.0 71206.70000000001 72808.09999999999 73500.53 72511.1 86916.1 72327.8 77605.9 73469.59999999999 74073.59999999999 72259.9 78094.5 True False 78435.55176439819 78943.89410704911 78488.71796039212 76989.94596234358 80811.41298026712 71738.7863770057 80559.2349920781 72004.19119221394 70960.54418988271 67697.39758204833 68489.37158182339 1.1452222432891244 1.1526444510114366 1.1459985125812207 1.124115234001887 1.1799117310300145 1.0474440737319406 1.1762297292483548 1.0513191978435872 1.0360811108495431 0.9884365415905606 1.0 16.06359250257309 -8.478859084988938 0.7582740852323383 1.0078948741160851 1.1465222781769966 0.7175343798348683 0.036232275280472605 0.20315887771685495 0.23712496860097976 0.007849523494037104 0.009419866187884169 3.3200216442307147e-09 8.478859084988938 0.13862740406091145 GGVTGS(ph)PEASISGSKGDLK ddPTM_A549_MK2206_60min_R1 1 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.027)GS(0.97)PEAS(0.003)ISGSKGDLK 109.08 2.4723e-10 23723000.0 2299.2 3308.4 3192.9 2403.4 3571.6 2620.6 2120.5 1909.2 4385.7 3851.7 5441.9 True False 2687.248749956949 3476.783428681062 3645.701231277479 2992.2331078927264 3046.2223712699124 2897.910152586507 2505.767401803411 2179.8349466797827 3392.345952523772 2981.5982948781716 4090.5260412006232 0.6569445403575052 0.8499599791474693 0.8912548641806025 0.7315032535557374 0.7447018648916378 0.7084443720436339 0.6125782788239957 0.5328984401331356 0.8293177743780049 0.728903389159951 1.0 11.998070670183886 -9.57606359408781 1.2702411134039848 0.9614477693296818 0.727386118236989 0.07339326374622401 0.12170355188406948 0.2539373697115354 0.8400350696387403 0.02836480480928974 0.021137236990585506 2.654216874421759e-10 9.57606359408781 -0.23406165109269284 GGVTGS(ph)PEASISGSKGDLK ddPTM_A549_PD325901_60min_R1 2 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVT(0.004)GS(0.996)PEASISGSKGDLK;GGVT(0.002)GS(0.997)PEASISGSKGDLK 215.84 5.647299999999999e-67 97738000.0 17603.199999999997 17149.300000000003 19857.5 23693.0 21012.0 42490.0 29858.0 32519.0 30053.0 26083.0 30425.0 True False 19390.26390520907 18594.531696473598 21205.149362847973 25156.462799292884 19536.189607464807 42143.97552751461 30994.262528924522 31870.383034338014 28789.976922122674 24436.114928647356 26682.91787996565 0.7266920354227029 0.6968702516014914 0.7947087892801051 0.9427927977165167 0.7321609164091148 1.579436541277129 1.1615769560268354 1.194411464957034 1.0789665902220937 0.915796204844401 1.0 14.703628818964727 GGVTGSPEASISGS(ph)KGDLK ddPTM_A549_PD325901_60min_R1 2 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVTGSPEASIS(0.007)GS(0.993)KGDLK;GGVTGSPEASIS(0.005)GS(0.995)KGDLK 253.18 1.0514999999999997e-97 331630000.0 53745.0 50234.0 56049.0 51405.0 62161.0 56263.0 58695.0 58492.0 54589.0 48079.0 51246.0 True False 59201.15283502218 54467.39547623836 59852.822190017156 54580.170100774536 57795.02580380829 55804.81278193821 60928.67034413638 57325.33117391365 52294.81416836106 45043.28373478652 44943.06687515927 1.3172477303221952 1.2119198635806345 1.3317476165183275 1.2144291410371428 1.2859608794466248 1.2416778974374445 1.3556856391972796 1.2755099987535174 1.163579119191468 1.0022298625037234 1.0 15.455810955660853 -9.539605787697319 0.7371938147953262 1.0194883949957487 1.2806410190815856 0.8200179034414729 0.0490970844786646 0.16679639606127633 0.19568411298528746 0.018361275451389922 0.011285708779531646 2.8866505482654663e-10 9.539605787697319 0.26115262408583684 GGVVGIK ddPTM_A549_MK2206_60min_R1 2 GGVVGIK 7 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 109.88 0.023688999999999998 13311100.0 9142.9 9628.900000000001 9151.4 7734.799999999999 11271.6 8580.2 8895.6 9260.4 12247.4 11676.0 12625.5 False True 10685.997997556275 10118.969881642814 10449.206128570495 9629.826347228363 9613.562571398237 9488.151068924191 10511.815373488529 10573.09005878559 9473.383455078932 9038.383490665825 9490.23990392665 1.1259987213953224 1.0662501669168578 1.1010476272835914 1.0147084209371735 1.012994683877334 0.9997798965017108 1.1076448519640896 1.11410145220996 0.9982238121461248 0.952387250708608 1.0 13.212228842280505 -2.000000000003509 0.13629695995842384 0.9785131150827212 1.4000818122461425 0.3607024081822522 0.04550521464486264 62.39152850634665 0.5459242250502684 0.112836924856684 5.137009359051516 0.009999999999919199 2.000000000003509 0.42156869716342127 GGVVGIK ddPTM_A549_PD325901_60min_R1 2 GGVVGIK 7 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 123.34 0.01736 29178000.0 8565.2 9284.6 8170.1 9301.0 10213.400000000001 10298.3 8924.0 9327.5 9736.8 9597.5 10393.2 False True 9434.732798633026 10067.045826306534 8724.572116802421 9875.50164589638 9496.046018317207 10214.434059190477 9263.607703400177 9141.455695217803 9327.596156634083 8991.512212080399 9114.902287923065 1.0350887481409126 1.1044600927477881 0.9571767026358782 1.083445695186561 1.041815448850082 1.1206301215893728 1.0163145375320306 1.00291318617095 1.023334739308487 0.986462819683086 1.0 13.154011475267207 -7.965955572035153 24.971651034566023 1.010666457659291 1.0563205552687334 0.2758940695720121 0.041120430506543286 195.65836172832698 143515.4868702795 0.00586639108743896 0.008105567901284295 1.0815445867519611e-08 7.965955572035153 0.04565409760944239 GGYDGYRPS(ph)FSNTPNSGYTQSQFSAPR ddPTM_A549_PD325901_60min_R1 1 GGYDGYRPSFSNTPNSGYTQSQFSAPR 27 1 G3V153;Q14444-2;Q14444 G3V153 CAPRIN1 Caprin-1 1 GGY(0.005)DGY(0.026)RPS(0.32)FS(0.32)NT(0.289)PNS(0.03)GY(0.005)T(0.001)QS(0.001)QFS(0.001)APR 40.986000000000004 0.02336 4700300.0 1304.3 1212.8 1256.2 1182.5 1691.4 1447.5 1459.5 1367.8 1385.7 1526.6 1480.8 True False 1436.711575825089 1315.0069123219696 1341.4532861442592 1255.5403393476483 1572.6018990132295 1435.7120399170958 1515.0420711690454 1340.5181559816574 1327.463847901555 1430.2102154688137 1298.6709875646065 1.1062937338111707 1.0125789556506515 1.0329431387851993 0.9667886257335733 1.2109317248723055 1.1055240731984641 1.1666096229732512 1.0322230717539373 1.0221710199216383 1.1012875694950899 1.0 10.342820261459487 -8.506185939054903 23.278309075791523 1.011350022879786 1.0833074607560353 0.052523817823783125 0.06986971916656447 357.45198485066425 498471.3614653501 0.01085823518838185 0.012949609743531492 3.1175545469724727e-09 8.506185939054903 0.07195743787624931 GGYFDEFGIIR ddPTM_A549_MK2206_60min_R1 3 GGYFDEFGIIR 11 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;; 169.12 1.4267e-14 17310000.0 3864.43 3513.49 3881.27 3407.35 5418.2 4494.0 4012.2099999999996 3933.45 6016.9 5600.9 4600.799999999999 False True 4516.651307757537 3692.3116336708486 4431.692448219594 4242.1509029617555 4621.189957446139 4969.552097124234 4741.176622112547 4491.0285831854135 4654.081757014912 4335.652800006011 3458.2943843796866 1.3060343642687573 1.067668400454329 1.2814676703743095 1.2266598593001703 1.3362627479947866 1.4369951035893729 1.370958077926316 1.298625300226131 1.3457737369138727 1.253696856921478 1.0 11.75584496706269 -10.744807955052801 0.9383709308916888 0.9955057270460721 1.2968925744797053 0.1259876243302036 0.11493356546457335 0.3436154750563962 0.5245549155845005 0.0711487475090925 0.017182901405407486 1.7996665514484947e-11 10.744807955052801 0.3013868474336332 GGYFDEFGIIR ddPTM_A549_PD325901_60min_R1 2 GGYFDEFGIIR 11 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 186.16 2.8838e-18 29301000.0 6717.9 6439.2 6970.799999999999 6957.900000000001 7580.5 8057.4 7386.8 8045.200000000001 8187.7 7188.400000000001 8428.5 False True 7399.896262543406 6981.853982374361 7443.880406825658 7387.673680462577 7048.071831305299 7991.783205822453 7667.908716212058 7884.732174662696 7843.599442493725 6734.523197219982 7391.847932663622 1.0010888116142407 0.944534309414355 1.007039169993218 0.9994352897625777 0.9534925360356481 1.0811617444817547 1.0373466535111686 1.0666794347623254 1.0611148272996624 0.9110743698420788 1.0 12.851719362161633 -7.250736841557877 24.9847032636285 1.036659510379129 0.9815432850970209 0.16883964674643603 0.046811449128683895 559.455016709579 1306027.0541352455 0.0047849357610787804 0.008224539341295706 5.613880431038351e-08 7.250736841557877 -0.05511622528210802 GGYLS(ph)DGDSPELTTK ddPTM_A549_PD325901_60min_R1 1 GGYLSDGDSPELTTK 15 0 Q5VT97-2;Q5VT97 Q5VT97-2 SYDE2 Rho GTPase-activating protein SYDE2 1 GGYLS(1)DGDSPELTTK 156.24 1.8751999999999998e-19 6115500.0 2969.7 3892.6 3314.5 3542.9 4097.5 3530.4 3598.2 3467.7 3853.8 4048.2 3600.1 True False 3271.1817578224063 4220.643063080886 3539.441901707645 3761.736886490301 3809.70573560761 3501.6495929003886 3735.1314700105913 3398.534003141974 3691.838187950503 3792.595961129866 3157.3105229141966 1.036065896617323 1.336784276506713 1.1210306607538687 1.191437097868416 1.206630044133655 1.1090608818762517 1.1830104903850465 1.0764015697781695 1.1692984143171758 1.2012109463434408 1.0 11.624480441998974 -13.501107247730472 0.2433622670832569 0.5591715491663297 1.1852507587889893 0.0 0.09646279449830664 14.590926421793265 0.3518739981463779 3.1837566562487725 0.0389312528473271 3.1542256005602706e-14 13.501107247730472 0.6260792096226596 GGYLSDGDS(ph)PELTTK ddPTM_A549_PD325901_60min_R1 1 GGYLSDGDSPELTTK 15 0 Q5VT97-2;Q5VT97 Q5VT97-2 SYDE2 Rho GTPase-activating protein SYDE2 1 GGYLS(0.136)DGDS(0.864)PELTTK 178.58 7.4275e-28 3782100.0 2698.3 3184.7 3815.8 3200.6 3317.6 3422.2 3052.9 3330.0 2995.8 4075.1 3522.1 True False 2972.2294296165287 3453.085845705623 4074.763134269435 3398.2937929100053 3084.583221098668 3394.3307378267923 3169.0797801109816 3263.5805376655376 2869.896944175131 3817.7974905390806 3088.9040284314556 0.9622278329980443 1.1179000104639376 1.319161455572512 1.1001616630464424 0.9986011843381934 1.0988786658905787 1.0259560513831305 1.0565496718662324 0.9290987734677091 1.2359715469948598 1.0 11.592879332106463 -7.763697263308669 0.8655213334042403 0.9687601773945618 1.1244588575036116 0.0 0.11883301231057039 0.4759128879118636 0.7184606342694027 0.017364974893769612 0.030843930443245487 1.7230692683930998e-08 7.763697263308669 0.15569868010904986 GHAVGDIPGVR ddPTM_A549_MK2206_60min_R1 1 GHAVGDIPGVR 11 0 D6RD47;P62266 D6RD47 RPS23 40S ribosomal protein S23 0 65.5 0.0060676 2706600.0 785.13 658.03 637.42 661.5 1082.9 753.9 1008.3 926.86 1173.4 1055.5 1209.6 False True 917.6407494144481 691.5209163266231 727.815740812707 823.5675296958639 923.6068445089558 833.6771976016819 1191.4950583533964 1058.245243389704 907.6267735347601 817.0618169234135 909.2229367383216 1.0092582493643683 0.7605625511465137 0.800481060699611 0.9057927340133637 1.0158200010024319 0.9169117538899241 1.310454246378426 1.1639007339453775 0.998244475431639 0.8986374891228328 1.0 9.828490268894456 -6.701543319048478 2.410752090151281 1.0321427783844717 0.8465402988586146 0.3217669741279463 0.12224742931610974 0.2690063229231138 3.17921824246796 0.01763663807820771 0.04019723039498591 1.9881844874631322e-07 6.701543319048478 -0.18560247952585707 GHDEREHPFLVK ddPTM_A549_MK2206_60min_R1 1 GHDEREHPFLVK 12 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 57.019 0.034461 2136100.0 227.19 378.55 278.97 75.253 364.8 306.63 233.19 230.02 456.85 483.9 543.31 False True 265.53411773778646 397.81657808222013 318.53214084045175 93.68998837823557 311.13840324763794 339.07738307547896 275.55760453974887 262.6260394067063 353.3742044395391 374.5866539168544 408.3911324068264 0.6501956009007309 0.9741067974167661 0.7799683087220906 0.22941239645944259 0.761863758926312 0.8302760666646913 0.6747394413678088 0.6430747843591434 0.86528373512165 0.9172252387294809 1.0 8.673807730398892 -9.161111385015387 1.1232545256245927 0.9658428244280247 0.6937274854858235 0.2519026354085756 0.17668144702221658 0.3929050277307773 1.0297959530161234 0.04281195918207409 0.037785779972851645 6.900627983380475e-10 9.161111385015387 -0.2721153389422012 GHEEGFLNNS(ph)GEFLFNK ddPTM_A549_MK2206_60min_R1 2 GHEEGFLNNSGEFLFNK 17 0 Q16659 Q16659 MAPK6 Mitogen-activated protein kinase 6 1 GHEEGFLNNS(1)GEFLFNK;GHEEGFLNNS(1)GEFLFNK 116.82 4.2072000000000007e-10 5087000.0 872.9 1151.0500000000002 1260.22 950.13 1447.09 1639.92 1163.87 1088.16 2057.5299999999997 1814.33 2062.23 True False 1020.2241796439725 1209.633528467942 1438.9381457861202 1182.911892652956 1234.224977948531 1813.4552459092063 1375.3301136226994 1242.4100123502367 1591.5027402002502 1404.4715928930898 1550.1213763474454 0.6581576095982427 0.7803476211122281 0.928274500140559 0.7631092059644091 0.7962118301063225 1.169879516262304 0.8872402733154954 0.8014920839797269 1.0266955636405142 0.9060397555464008 1.0 10.598165469322076 -3.732422808061472 0.26939360069349544 1.018689061613937 1.0790927506336583e-15 0.3365709221419928 0.11223914580105437 12.348858295455646 0.3428622741034455 0.046347762596234014 4.888200681991883 0.0001851727992955306 3.732422808061472 -1.018689061613936 GHEEGFLNNS(ph)GEFLFNK ddPTM_A549_PD325901_60min_R1 2 GHEEGFLNNSGEFLFNK 17 0 Q16659 Q16659 MAPK6 Mitogen-activated protein kinase 6 1 GHEEGFLNNS(1)GEFLFNK;GHEEGFLNNS(1)GEFLFNK 135.09 7.778e-13 6324500.0 2319.5 2292.3999999999996 2249.48 3007.1000000000004 3260.5 2587.4 2705.7 3001.7 3129.3 2640.6000000000004 3217.2 True False 2554.973932474349 2485.5885931784983 2402.1432400221206 3192.8417373803914 3031.4937281143657 2566.329072249737 2808.666894115851 2941.828738711904 2997.7864034338854 2473.872065352384 2821.5047955111104 0.9055359170536232 0.8809443092682174 0.8513695400567188 1.1316095377403086 1.0744244464646449 0.9095604148299351 0.9954499806572422 1.0426453087700662 1.0624778693281796 0.8767917280481697 1.0 11.46224908629263 -6.242287374823036 24.989067292436026 1.0287098382688942 0.8794493458333513 0.39611438881952843 0.07051115389751221 440.85154108407863 575211.5646913389 0.007756308271898576 0.020484735876262733 5.724171343702402e-07 6.242287374823036 -0.14926049243554285 GHHDDS(ph)DEEASPEK ddPTM_A549_MK2206_60min_R1 2 GHHDDSDEEASPEK 14 0 Q5VT06;H0Y6Q4 Q5VT06 CEP350 Centrosome-associated protein 350 1 GHHDDS(1)DEEASPEK;GHHDDS(1)DEEASPEK 130.06 3.0922e-09 26606000.0 980.75 847.59 731.4 304.02 1102.47 741.61 669.27 618.55 1182.28 1120.22 1330.17 True False 1146.2766229646306 890.7287106503996 835.1235179793754 378.5049136479762 940.2981234331775 820.0866779591236 790.8676958287994 706.2313567299288 914.495467713206 867.1615239734216 999.8520781756063 1.1464462073791954 0.890860488359118 0.8352470692496783 0.37856091106858564 0.9404372346246509 0.8202080046235498 0.7909846997286507 0.7063358392159004 0.9146307615641033 0.8672898150651441 1.0 9.96557086279433 -8.995139682559314 3.8797900094895876 0.9650536935731712 0.8058749897771124 0.06658165754984313 0.17763878399702088 0.3089139603362945 9.745500939094754 0.03180324951089737 0.03237802817408258 1.0112541512864241e-09 8.995139682559314 -0.1591787037960588 GHHDDS(ph)DEEASPEK ddPTM_A549_PD325901_60min_R1 3 GHHDDSDEEASPEK 14 0 Q5VT06;H0Y6Q4 Q5VT06 CEP350 Centrosome-associated protein 350 1 GHHDDS(1)DEEASPEK;GHHDDS(0.998)DEEAS(0.002)PEK;GHHDDS(1)DEEASPEK 139.65 2.6856e-10 48377800.0 1536.35 1473.21 1453.95 1301.96 1765.2 1890.4500000000003 1253.02 615.19 1828.41 1589.1 1778.6100000000001 True False 1692.3191209989081 1597.362576930944 1552.6237903116103 1382.379112234304 1641.2184416094078 1875.054801976701 1300.7043617788527 602.9195528427811 1751.568286167051 1488.7639548024965 1559.8522455377395 1.0849227071603198 1.0240473618578363 0.9953659359424538 0.8862243947712793 1.0521627585589803 1.2020720599278936 0.8338638262051873 0.3865235021891013 1.1229065388582493 0.9544262663732384 1.0 10.607193663284553 GHKHEDGTQS(ph)DSEDPLAK ddPTM_A549_MK2206_60min_R1 2 GHKHEDGTQSDSEDPLAK 18 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 GHKHEDGT(0.006)QS(0.993)DS(0.001)EDPLAK;GHKHEDGT(0.01)QS(0.99)DSEDPLAK 166.25 6.454e-24 72744000.0 4589.9 4694.7 4173.4 3332.8 5808.299999999999 5280.3 4067.5 3531.2 6471.1 6754.8 7709.0 True False 5364.562907718945 4933.640177315011 4765.250874945485 4149.336149615078 4953.906764208486 5839.057841220535 4806.512099427195 4031.758413846455 5005.406182223269 5228.885988587659 5794.642542423713 0.9257797816593395 0.8514140675968992 0.8223545870272669 0.7160642126303695 0.8549115373277927 1.0076648901932517 0.8294751685264066 0.6957734466499291 0.8637989566358425 0.9023655817086146 1.0 12.500503952247842 -10.212385122415458 0.8702642632455614 0.9918733523781688 0.83935860767645 0.16806056324477647 0.08594653371014614 0.49062872399964924 0.727644357431932 0.040933788348702135 0.016563511613092875 6.132179763054517e-11 10.212385122415458 -0.15251474470171877 GHKHEDGTQS(ph)DSEDPLAK ddPTM_A549_PD325901_60min_R1 2 GHKHEDGTQSDSEDPLAK 18 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 GHKHEDGT(0.007)QS(0.843)DS(0.149)EDPLAK;GHKHEDGT(0.01)QS(0.974)DS(0.017)EDPLAK 173.77 8.349799999999999e-31 102739000.0 8562.1 7281.4 7499.1 8057.8 8964.400000000001 9168.2 7744.4 9350.5 10644.3 10094.9 10746.099999999999 True False 9431.318088915124 7895.029132075527 8008.034021751644 8555.512005408436 8334.771469501122 9093.537218907026 8039.11737989829 9163.996942174655 10196.95708755035 9457.50629119359 9424.397825140479 1.0007342924081775 0.8377223965455687 0.849713071363504 0.907804632629768 0.8843823896384473 0.9648931833765707 0.8530112511223984 0.9723694937546907 1.0819743899550798 1.0035130590481645 1.0 13.202184724535414 -8.510934181875419 5.052907158858733 1.0385040106565224 0.8981398364282748 0.5590907934420577 0.05042362264852482 0.090746220295066 6.712797612360204 0.00860916419401003 0.010119451826206499 3.083655248442242e-09 8.510934181875419 -0.14036417422824765 GHLS(ph)EGLVTK ddPTM_A549_MK2206_60min_R1 4 GHLSEGLVTK 10 0 Q16659 Q16659 MAPK6 Mitogen-activated protein kinase 6 1 GHLS(1)EGLVTK;GHLS(1)EGLVTK;GHLS(1)EGLVTK;GHLS(1)EGLVTK 124.42 2.1599e-05 28892500.0 10380.31 11628.6 11464.23 9177.52 14543.599999999999 11653.57 10043.98 10340.380000000001 15694.599999999999 17188.1 17175.2 True False 12132.25255378637 12220.446070233535 13090.030200334555 11426.012811994524 12404.255705790418 12886.7430423863 11868.841154617035 11806.16053108564 12139.798159126163 13305.296272346106 12910.123828594596 0.9397471871582422 0.9465785326680216 1.0139352940474113 0.8850428519273441 0.9608161680305705 0.9981889572463658 0.9193437113537806 0.9144885585788269 0.9403316591152874 1.0306095006522125 1.0 13.656215217998007 -10.669228925981598 0.9850097441923543 0.9993482176533183 0.9469867767010804 0.330286237137264 0.035979863422637016 0.6027686917032983 1.0604881333550267 0.021385140918001987 0.005971733196725958 2.1417613349557044e-11 10.669228925981598 -0.052361440952237825 GHLS(ph)EGLVTK ddPTM_A549_PD325901_60min_R1 3 GHLSEGLVTK 10 0 Q16659 Q16659 MAPK6 Mitogen-activated protein kinase 6 1 GHLS(1)EGLVTK;GHLS(1)EGLVTK;GHLS(1)EGLVTK 116.03 5.3397e-09 28923000.0 4593.9 4059.6000000000004 4533.1 4604.4 5195.3 4606.200000000001 4365.3 4582.2 5083.7 5016.5 5724.9 True False 5060.269346149559 4401.716739167442 4840.7434257447385 4888.803330648891 4830.400050812011 4568.6886343807455 4531.423880283818 4490.804426333639 4870.049768042962 4699.757333878756 5020.773593131154 1.0078664676440379 0.8767009022652138 0.9641429425073634 0.9737151536442891 0.9620828267222425 0.9099571111175181 0.9025349970935141 0.8944447191320163 0.9699799598025303 0.9360623909248617 1.0 12.293693954214476 -9.020552168598465 3.868191052554522 0.9878027586093213 0.9352447246628073 0.06745928879933893 0.04057035523497699 0.196710663278214 6.2457765345740475 0.006820882765293252 0.006877349378580455 9.537791654913998e-10 9.020552168598465 -0.05255803394651404 GHPHS(ph)ASSPSER ddPTM_A549_PD325901_60min_R1 1 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHS(0.431)AS(0.266)S(0.266)PS(0.038)ER 59.898 0.0027741 8600300.0 476.62 279.07 145.73 475.69 348.44 574.33 278.04 466.64 252.24 470.01 579.96 True False 525.0061115309007 302.5882082962501 155.62011414567965 505.07229092962575 323.96677645274303 569.6528468985048 288.620964349326 457.3324991280018 241.6392299882284 440.3334883875918 508.62859666934736 1.0321993591567566 0.5949099407262755 0.30596021372908805 0.9930080499543098 0.636941726387731 1.119978016628956 0.567449345631179 0.8991482235225314 0.4750799140483932 0.8657269592607013 1.0 8.990468766850432 -11.146663400963805 1.5350200914013388 0.9994740750063358 0.6980439068292456 0.06294260265708007 0.2461695504743335 0.5667216144060264 2.400533399852567 0.17120836609421697 0.03686512517229316 7.1340573954744255e-12 11.146663400963805 -0.30143016817709023 GHPHSAS(ph)SPSER ddPTM_A549_MK2206_60min_R1 3 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHS(0.001)AS(0.449)S(0.449)PS(0.102)ER;GHPHS(0.001)AS(0.457)S(0.457)PS(0.086)ER;GHPHS(0.029)AS(0.451)S(0.451)PS(0.07)ER 85.536 0.00011924 13290900.0 447.02 607.8399999999999 478.4 470.39 154.49 329.44 249.549 210.486 666.34 723.95 755.51 True False 522.4660474102973 638.7764597054461 546.2443136468873 585.6355711166093 131.7647256516655 364.3011221354264 294.8888230854229 240.32303508634018 515.4150539263268 560.4091921948885 567.8960159847634 0.920003015876616 1.1248123630481401 0.9618738259673635 1.0312373297796156 0.23202262728182393 0.6414926533754739 0.5192655253516248 0.42318140702150664 0.9075870219525458 0.9868165587024021 1.0 9.149482980496495 -8.977846288127875 24.057683897112266 0.9592299324884234 0.731348082816396 0.14173283289956418 0.25818410322948837 159.94351836348852 173692.4975798392 0.049109203927748604 0.05045908416161319 1.0523342654942914e-09 8.977846288127875 -0.2278818496720274 GHPHSAS(ph)SPSER ddPTM_A549_PD325901_60min_R1 2 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHS(0.074)AS(0.431)S(0.431)PS(0.065)ER;GHPHS(0.001)AS(0.46)S(0.46)PS(0.079)ER 69.71600000000001 0.0010665 15041900.0 409.99 184.51 182.596 459.27 440.63 365.04999999999995 235.27499999999998 278.55999999999995 371.75 467.68 429.48 True False 451.611882981314 200.05930523790136 194.98806259894687 487.63806482215165 409.6816688909778 362.07715383194187 244.22851887241998 273.0039022739073 356.1266402954485 438.15060498523184 376.6566826980331 1.1990013816995588 0.5311449774496356 0.5176811445431581 1.294648647487539 1.0876792785312692 0.9612922602045543 0.6484114847584393 0.7248083329315981 0.9454940179063713 1.1632625282172377 1.0 8.557106315839091 -8.977492677205527 19.284604996003164 0.9759547662869209 0.8626611690807167 0.06684984163511853 0.2503782715679325 35.11916577703416 30093.26700182035 0.04371071581938041 0.04505873478648367 1.0531914452173635e-09 8.977492677205527 -0.11329359720620424 GHPHSASS(ph)PSER ddPTM_A549_PD325901_60min_R1 1 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHS(0.14)AS(0.156)S(0.548)PS(0.156)ER 63.727 0.0021073 2126500.0 237.4 0.0 0.0 223.05 297.07 170.42 167.64 204.03 218.68 259.94 280.22 True False 261.5006732353569 0.0 0.0 236.8272919166959 276.2048280358637 169.03215602257094 174.0196319361279 199.96046159156134 209.4896400801847 243.52734403836206 245.75471646093612 1.0640718396015958 0.0 0.0 0.9636734355588278 1.1239044849817472 0.6878083906456355 0.7081029183982687 0.8136586938031197 0.8524338539540667 0.9909366035588248 1.0 7.94107529443624 -6.278069097385563 24.853030148728994 0.9030130066608776 0.31922154830535804 0.4043351809581395 0.2896803938074882 464.8066885529324 694650.6872439533 0.0383297282129685 0.08930022741243147 5.2714598444852e-07 6.278069097385563 -0.5837914583555195 GHQEVLEGYPS(ph)SETELSLK ddPTM_A549_MK2206_60min_R1 1 GHQEVLEGYPSSETELSLK 19 0 Q9ULJ7-2;Q9ULJ7 Q9ULJ7-2 ANKRD50 Ankyrin repeat domain-containing protein 50 1 GHQEVLEGY(0.057)PS(0.439)S(0.439)ET(0.065)ELS(0.001)LK 78.021 0.00010808 1572600.0 1236.0 1351.6 811.31 704.42 1492.7 1068.5 1043.5 1271.3 1507.1 1809.0 1939.3 True False 1444.6065827012824 1420.390666849634 926.3659575770401 877.0029316226156 1273.1258073677334 1181.5679607871032 1233.0904427172163 1451.5106681929637 1165.7442563441593 1400.3456435949352 1457.7182880428463 0.9910053228740322 0.9743931173125853 0.6354903860201908 0.601627172284497 0.8733688928860531 0.8105598801079003 0.84590448842676 0.9957415504073719 0.799704761822879 0.9606421591067911 1.0 10.509496222630862 -8.020995554467666 10.86174745052254 0.9100922240667998 0.8083354162374936 0.16839083418111944 0.12356135176936488 1.1557296661295517 592.8918295795738 0.02194659965795477 0.028809876919487932 9.528059171013687e-09 8.020995554467666 -0.10175680782930618 GHQQLYWS(ph)HPR ddPTM_A549_MK2206_60min_R1 2 GHQQLYWSHPR 11 0 P62273;A0A2R8Y851;P62273-2 P62273 RPS29 40S ribosomal protein S29 1 GHQQLY(0.006)WS(0.994)HPR;GHQQLY(0.073)WS(0.927)HPR 66.393 0.006225100000000001 7105300.0 657.79 808.9100000000001 781.5799999999999 601.44 1165.4099999999999 580.01 710.31 757.81 1008.1399999999999 837.23 768.11 True False 768.8088705785411 850.0800638660378 892.4197965303804 748.7928269996679 993.979732809292 641.3862732205223 839.3641325984349 865.2318881957915 779.7978996687681 648.0991615185121 577.3670882424541 1.331577234370683 1.4723389697423543 1.5456714016155109 1.2969094398488243 1.7215732469875207 1.1108812509091004 1.4537789730161417 1.4985819348131153 1.3506102366217783 1.1225079758033514 1.0 9.173345061493624 -10.363620748451417 0.5033862742956628 0.9458536621257734 1.442685164705512 0.45010830845898064 0.1513929683669444 0.6808554365523541 0.27938219408017423 0.15839316086618152 0.03509358935966435 4.32891692575738e-11 10.363620748451417 0.4968315025797385 GHQQLYWS(ph)HPR ddPTM_A549_PD325901_60min_R1 2 GHQQLYWSHPR 11 0 P62273;A0A2R8Y851;P62273-2 P62273 RPS29 40S ribosomal protein S29 1 GHQQLY(0.027)WS(0.973)HPR;GHQQLY(0.133)WS(0.867)HPR 67.51899999999999 0.0055099 8669200.0 658.98 638.33 560.99 876.12 545.48 648.88 633.27 625.0 644.36 778.4 886.62 True False 725.8791644845638 692.1243093193299 599.0621549069158 930.2359425871139 507.167366603841 643.5957364154785 657.369436388641 612.5338846969848 617.2797900222602 729.2516911574247 777.571360747252 0.9335209617121037 0.8901103413250626 0.7704272368406322 1.1963351398296742 0.6522454300740311 0.8276998985623366 0.8454136424943737 0.7877526303287908 0.7938561284318002 0.9378582185133572 1.0 9.602831272827466 -4.293404287381721 22.894033127318107 0.8819104481577695 0.872390197974545 0.0 0.136426353986019 0.0 0.0 0.017596668840738836 0.0 5.0885695246428494e-05 4.293404287381721 -0.009520250183224555 GHQQLYWS(ph)HPRK ddPTM_A549_MK2206_60min_R1 2 GHQQLYWSHPRK 12 1 P62273;A0A2R8Y851;P62273-2 P62273 RPS29 40S ribosomal protein S29 1 GHQQLY(0.002)WS(0.998)HPRK;GHQQLYWS(1)HPRK 67.964 0.00098267 4309200.0 3215.8 2931.5 2781.1000000000004 2538.1 4266.6 3706.5 3082.2 3061.0 5043.8 4585.4 4470.7 True False 3758.5484212384963 3080.700828551124 3175.501799087286 3159.9346139396393 3638.9887919308435 4098.719369824425 3642.1958433569757 3494.906123919347 3901.387353293526 3549.5549553013934 3360.5018049570212 1.1184485649417961 0.9167383347352566 0.9449486961748258 0.9403162971906373 1.0828706553774292 1.2196748008819607 1.083824992441436 1.03999531223702 1.1609538038452034 1.056257416694585 1.0 11.714460963341265 -6.773666196914945 23.821990568719176 1.086918498143099 0.9730744872075756 0.3439533568826856 0.07385469621800504 120.90729375630326 235569.0720036375 0.012065153125649842 0.022935158859853432 1.6839678783501666e-07 6.773666196914945 -0.11384401093552343 GHREEEQEDLTKDMDEPS(ph)PVPNVEEVTLPK ddPTM_A549_MK2206_60min_R1 5 GHREEEQEDLTKDMDEPSPVPNVEEVTLPK 30 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 GHREEEQEDLT(0.005)KDMDEPS(0.995)PVPNVEEVTLPK;GHREEEQEDLT(0.011)KDMDEPS(0.988)PVPNVEEVT(0.001)LPK;GHREEEQEDLT(0.008)KDMDEPS(0.987)PVPNVEEVT(0.005)LPK;GHREEEQEDLT(0.017)KDMDEPS(0.983)PVPNVEEVTLPK;GHREEEQEDLTKDMDEPS(1)PVPNVEEVTLPK 130.19 5.7322999999999995e-28 110811000.0 7446.500000000001 7618.0 7308.19 6004.4 10466.7 7212.45 6848.94 6762.93 10802.9 10441.3 12026.5 True False 8703.287150554288 8005.723660891165 8344.60123442944 7475.478269547758 8927.062295153648 7975.66667176317 8093.303743884674 7721.5960381044915 8356.06039868643 8082.603078202215 9039.988135485633 0.9627542669431548 0.8855900628304412 0.9230765692792763 0.826934522204013 0.9875081871082656 0.8822651702888228 0.8952781378235622 0.8541599748117018 0.9243441776085404 0.8940944343139907 1.0 13.142105163841569 -10.04803948863155 0.823017090682636 0.9944278470379841 0.9023935455100148 0.0 0.05256823163537356 0.3921373267423674 0.533134470540033 0.01841517084280003 0.008228106051494393 8.952833573728148e-11 10.04803948863155 -0.09203430152796932 GHREEEQEDLTKDMDEPS(ph)PVPNVEEVTLPK ddPTM_A549_PD325901_60min_R1 5 GHREEEQEDLTKDMDEPSPVPNVEEVTLPK 30 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 GHREEEQEDLT(0.001)KDMDEPS(0.999)PVPNVEEVTLPK;GHREEEQEDLT(0.001)KDMDEPS(0.999)PVPNVEEVTLPK;GHREEEQEDLT(0.002)KDMDEPS(0.998)PVPNVEEVTLPK;GHREEEQEDLT(0.008)KDMDEPS(0.992)PVPNVEEVTLPK;GHREEEQEDLT(0.001)KDMDEPS(0.999)PVPNVEEVTLPK 130.15 4.9116e-28 232489000.0 8443.0 9528.8 8773.6 9066.4 10242.7 9973.8 8927.1 10430.6 9848.5 9536.1 10924.4 True False 9300.12714459191 10331.825417326503 9369.029255942736 9626.410936711638 9523.288087396724 9892.576679602846 9266.825675596556 10222.553500352597 9434.601794081296 8933.989018558997 9580.768055477296 0.9707078900918654 1.0783921870877387 0.9778996007096207 1.004764010669087 0.9940004843298852 1.0325452638368893 0.9672320237727433 1.0669868471044337 0.9847437845745115 0.9324919429034151 1.0 13.2259256008962 GHS(ph)GTTASGGENEREDLEQEWKPPDEELIK ddPTM_A549_PD325901_60min_R1 1 GHSGTTASGGENEREDLEQEWKPPDEELIK 30 2 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 GHS(0.261)GT(0.261)T(0.239)AS(0.239)GGENEREDLEQEWKPPDEELIK 74.05 3.0171e-06 6478500.0 1954.5 1505.1 1457.6 1544.1 1336.2 1839.8 1098.6 1596.5 1691.4 1654.1 1678.0 True False 2152.919401173147 1631.9400591489095 1556.5215012608426 1639.4755500944634 1242.3499216397527 1824.8172787837455 1140.4078241769873 1564.6565550699786 1620.3163400019403 1549.6598437095272 1471.6166377184027 1.4629621234175754 1.1089437407279334 1.057694960335646 1.11406429369833 0.8442075808315774 1.2400085946384418 0.7749353975401351 1.063222931140426 1.101045135310567 1.0530322938670515 1.0 10.523186176916099 -5.06649427312989 1.7652566107647059 1.0344180987748235 1.7950222844802737 0.5178750983242268 0.12043766253117467 0.9127465462040549 1.8478725821089501 0.015273278796238047 1.3587180414960431 8.5803642923611e-06 5.06649427312989 0.7606041857054502 GHS(ph)PAFLQPQNGNSR ddPTM_A549_PD325901_60min_R1 2 GHSPAFLQPQNGNSR 15 0 F5H6B2;Q9UHN6-2;Q9UHN6 F5H6B2 TMEM2 Transmembrane protein 2 1 GHS(1)PAFLQPQNGNSR;GHS(1)PAFLQPQNGNSR 105.5 1.574e-06 18436100.0 2735.9 2959.5 2368.1 2991.3999999999996 3390.8 3271.5 2947.8 3163.6 2652.8 3018.4 3213.7 True False 3013.646553936869 3208.907451366153 2528.8135065421275 3176.171984037677 3152.6419056249624 3244.857988662367 3059.9801420980534 3100.4995162038094 2541.3120413604997 2827.8177088766342 2818.43527332278 1.0692622897753992 1.138542183934218 0.8972402277526124 1.1269274175287853 1.118578785706216 1.151297679026298 1.0857017619178833 1.1000783113775365 0.901674792894723 1.0033289519339548 1.0 11.460678720358882 -8.75122626905934 24.998784848915736 0.9535686516847703 1.0860391479563698 0.3569645756730315 0.06954042395784808 145.1819978018799 355363.8616263622 0.012113701680489662 0.01366003824745912 1.773265362249824e-09 8.75122626905934 0.13247049627159946 GHS(ph)PAQKPK ddPTM_A549_MK2206_60min_R1 2 GHSPAQKPK 9 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0 Q14966-3 ZNF638 Zinc finger protein 638 1 GHS(1)PAQKPK;GHS(1)PAQKPK 114.83 8.9701e-05 48615000.0 2307.5 2122.69 1217.72 1097.6 4145.0 3783.9 3603.1 4872.799999999999 4107.4 2808.3 2905.2 True False 2696.949587041433 2230.7258542579507 1390.4110067184104 1366.512049273136 3535.2759908482963 4184.3097864504625 4257.736630718162 5563.534322324136 3177.0804581699954 2173.9030795509443 2183.758660559004 1.2350034991279948 1.0215075019722755 0.6367054344560628 0.6257614790287004 1.6188950064396435 1.9161044954387736 1.9497285609519945 2.5476873533726336 1.4548679373556408 0.9954868726173538 1.0 11.092597709393475 -6.766454758725065 24.99379390577599 1.4557382726669255 0.8725104626571349 0.34289277831679377 0.46363747240068615 154.1539426774626 768220.2167916727 0.07920730385143666 0.15304621418176353 1.712163526715608e-07 6.766454758725065 -0.5832278100097905 GHS(ph)PAQKPK ddPTM_A549_PD325901_60min_R1 2 GHSPAQKPK 9 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0 Q14966-3 ZNF638 Zinc finger protein 638 1 GHS(1)PAQKPK;GHS(1)PAQKPK 106.29 0.00022474 41151000.0 3388.8 2895.6000000000004 2110.33 1849.98 2767.1 1482.56 1638.65 1733.94 2412.1 3014.5 3475.8 True False 3732.828481297296 3139.6223741090835 2253.549684245194 1964.24906299058 2572.7484419767684 1470.4865229012012 1701.0097224536873 1699.3552064503842 2310.727825303701 2824.1639555422107 3048.298634911576 1.2245612810194946 1.0299589213968718 0.739281138152189 0.6443755347636922 0.8439948804594068 0.48239582108524504 0.5580193826721409 0.5574766156399498 0.7580385329834096 0.926472204264243 1.0 11.573788531981876 -5.55689125199075 3.263308502035861 0.7869884454680952 1.2040049592702144 0.4583767665944164 0.16288862651371755 0.21928712806023834 4.540425780419197 0.02782178002555941 0.16100974593368597 2.774014635242938e-06 5.55689125199075 0.41701651380211924 GHSERS(ph)DTNEKR ddPTM_A549_PD325901_60min_R1 2 GHSERSDTNEKR 12 2 P30414 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 GHS(0.005)ERS(0.956)DT(0.039)NEKR;GHS(0.007)ERS(0.95)DT(0.043)NEKR 79.337 0.00018729 37961000.0 3645.0 3512.9 3109.3 3092.7 3353.3 2416.6000000000004 1851.98 1877.34 3011.2 4286.4 4893.700000000001 True False 4015.037716692824 3808.94441152362 3320.315795739804 3283.7290549686863 3117.775776256984 2396.920010821178 1922.4581123423413 1839.894980955261 2884.649735730072 4015.755972478401 4291.80592372023 0.9355124132016908 0.8874922303620723 0.7736407131992779 0.7651159240029846 0.7264484535578508 0.5584875116495194 0.4479368700521093 0.4286994830745749 0.6721295853074352 0.9356797683427067 1.0 12.067369123287522 -5.703055578235321 2.3262626348219215 0.7507424705289559 0.9349702821626422 0.13376191324665943 0.17470195753879508 0.7056933772403298 7.119623642952637 0.030992657523204334 0.18119232612363534 1.9812734588514033e-06 5.703055578235321 0.1842278116336863 GHSGTT(ph)ASGGENEREDLEQEWKPPDEELIK ddPTM_A549_PD325901_60min_R1 1 GHSGTTASGGENEREDLEQEWKPPDEELIK 30 2 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 GHS(0.085)GT(0.077)T(0.44)AS(0.398)GGENEREDLEQEWKPPDEELIK 87.368 1.6396e-09 6986700.0 3171.8 3280.7 2824.5 3320.8 3853.7 3530.2 3123.8 2687.7 3193.1 3245.3 4303.2 True False 3493.79880104425 3557.1761026176496 3016.18755509828 3525.9182739160005 3583.029406543266 3501.4512216340813 3242.6779184089514 2634.0917150401383 3058.905111304362 3040.391204153638 3773.9336802323146 0.9257711176390306 0.9425645504185644 0.7992158343685071 0.9342819913303175 0.9494150428003024 0.9277988216842592 0.8592302337992701 0.6979697944448218 0.8105349405917655 0.8056292086103851 1.0 11.881853355178443 -7.746846342436239 24.533122304298377 0.8854363335358982 0.911937245672531 0.04840530001654575 0.08362561749852329 968.5640608711816 1628296.7257796295 0.01574402856862603 0.023288954305377727 1.7912394996928088e-08 7.746846342436239 0.026500912136632748 GHTAS(ph)ESDEQQWPEEK ddPTM_A549_MK2206_60min_R1 2 GHTASESDEQQWPEEK 16 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GHT(0.028)AS(0.533)ES(0.439)DEQQWPEEK;GHT(0.015)AS(0.86)ES(0.125)DEQQWPEEK 143.46 8.4399e-15 91370000.0 4236.6 4899.2 3921.2 3794.8999999999996 6413.700000000001 5472.200000000001 5236.8 5409.6 7294.0 7454.200000000001 6971.3 True False 4951.63450507464 5148.548353824888 4477.285122642506 4724.650670359534 5470.253226177017 6051.264571847622 6188.258773762838 6176.4273662051955 5641.920646124546 5770.291042833262 5240.133811907957 0.9449442863123617 0.9825223054657601 0.8544219066444614 0.9016278667584763 1.0439147973179852 1.1547919936884834 1.1809352577409973 1.1786774131930668 1.0766749187403473 1.1011724604666673 1.0 12.355387937514726 -6.82619292560239 5.383238821925641 1.0693518931612267 0.9205901435996342 0.6236636942077292 0.06535912667688307 0.14710110219613654 8.17145227732575 0.011677065695647321 0.022586853547051252 1.4921314163479252e-07 6.82619292560239 -0.1487617495615925 GHTAS(ph)ESDEQQWPEEK ddPTM_A549_PD325901_60min_R1 2 GHTASESDEQQWPEEK 16 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GHTAS(0.91)ES(0.09)DEQQWPEEK;GHT(0.018)AS(0.972)ES(0.011)DEQQWPEEK 263.45 3.2544000000000006e-91 28075000.0 5735.7 5488.3 4667.299999999999 5603.6 5239.6 4904.200000000001 5394.2 4518.0 8182.2 7081.8 8803.0 True False 6317.9840416008265 5950.818302190528 4984.051044754891 5949.721645301044 4871.588571638711 4864.261821182328 5599.4792328195035 4427.884945697565 7838.330588366958 6634.65393941245 7720.2868068147145 0.8183613121761134 0.7708027500918395 0.6455784829593971 0.7706607013678833 0.6310113462803674 0.6300623205978091 0.7252941986399819 0.5735389185009372 1.0152900772349605 0.859379205129533 1.0 12.9144387289279 -8.774774340447902 24.998955923614407 1.0072203537816726 0.6956446671433307 0.6560369528298766 0.0826184377674015 64.8357272111828 121546.65909168097 0.011731758524964091 0.012524225216558264 1.6796765518936413e-09 8.774774340447902 -0.3115756866383419 GHTASES(ph)DEQQWPEEK ddPTM_A549_MK2206_60min_R1 2 GHTASESDEQQWPEEK 16 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GHTAS(0.289)ES(0.711)DEQQWPEEK;GHTAS(0.129)ES(0.871)DEQQWPEEK 215.48 2.0184999999999996e-46 17286400.0 3242.5 3007.9 1871.0 1075.9 4126.5 3683.6 3018.8 3232.6 5702.9 5042.9 5929.4 True False 3789.75472848617 3160.989262220339 2136.3359340161496 1339.4955482989867 3519.4973163414943 4073.396107024216 3567.2768840198696 3690.830949422307 4411.2022556599495 3903.7053875538436 4456.966336885092 0.8502991591214876 0.709224396886405 0.479325122188202 0.3005397499221725 0.7896620818548115 0.9139391682888618 0.8003822812161931 0.8281038424898167 0.9897320110213967 0.8758660246651282 1.0 12.121846349092047 -7.652054916742993 0.93390944817545 0.989598858571053 0.6003910893846892 0.41751630147554786 0.15477910651533366 0.3155646773862382 0.5540815108039902 0.029011446201798345 0.05380413679583367 2.2281533804051872e-08 7.652054916742993 -0.3892077691863638 GHTASES(ph)DEQQWPEEK ddPTM_A549_PD325901_60min_R1 2 GHTASESDEQQWPEEK 16 0 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GHT(0.004)AS(0.406)ES(0.589)DEQQWPEEK;GHT(0.005)AS(0.41)ES(0.585)DEQQWPEEK 186.94 1.0519e-34 111573000.0 20483.0 20664.0 19727.5 21202.0 20934.0 20157.2 18756.0 19663.0 24848.0 25198.0 28836.0 True False 22562.41908121236 22405.4278003143 21066.32678109445 22511.599386764337 19463.66805837941 19993.04644629835 19469.769843677004 19270.806039674917 23803.724971247622 23606.993979682426 25289.354806464748 0.8921706090914072 0.8859628081372315 0.8330116344332058 0.8901610799896592 0.7696387751815594 0.7905716298142769 0.7698800539861904 0.7620125616944842 0.9412547355760396 0.9334755338893715 1.0 14.626242610327298 -8.910945806226751 5.009702475070696 0.9748072017805878 0.8242117376326011 0.5981204127781956 0.0489746219480594 0.0978942013114186 4.052137217840327 0.009392103633792594 0.00988840642424308 1.2275924076703423e-09 8.910945806226751 -0.15059546414798664 GHTDTEGRPPS(ph)PPPT(ph)STPEK ddPTM_A549_MK2206_60min_R1 1 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHT(0.01)DT(0.041)EGRPPS(0.942)PPPT(0.377)S(0.334)T(0.296)PEK 53.443999999999996 0.0055241000000000005 36548000.0 1581.1 1662.7 1762.6 1399.2 2607.5 1547.5 2162.2 1705.5 2837.6 2559.8 2393.0 True False 1847.9510258163402 1747.324328034096 2012.563184017566 1742.0040628124739 2223.9402041343624 1711.255422852637 2555.043752029868 1947.2598478746966 2194.8881307160686 1981.5394021416887 1798.7520565598586 1.027351723700361 0.9714092176638736 1.11886636998021 0.9684514641468063 1.2363795199143137 0.951357034790798 1.420453554291651 1.0825615686015455 1.2202282814418717 1.1016189779548682 1.0 10.812780621099245 -6.739872261671654 24.99295620991862 1.1248218734732147 1.0248937232078739 0.17241374238522866 0.12498134791303259 422.05633998106566 489095.46549546055 0.0184703616607207 0.038421146487261214 1.820236162978844e-07 6.739872261671654 -0.09992815026534085 GHTDTEGRPPS(ph)PPPTS(ph)TPEK ddPTM_A549_PD325901_60min_R1 2 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHT(0.001)DT(0.005)EGRPPS(0.994)PPPT(0.317)S(0.366)T(0.317)PEK;GHTDT(0.004)EGRPPS(0.996)PPPT(0.243)S(0.656)T(0.101)PEK 117.53 9.3624e-15 55512000.0 6292.8 6136.4 6801.5 6780.5 8168.7 7249.9 7085.799999999999 7604.8 8163.700000000001 7759.400000000001 8293.8 True False 6931.640423485482 6653.535963697672 7263.090690742061 7199.3160853672125 7594.958692485143 7190.859218096686 7355.453996498536 7453.1162981498155 7820.608079031479 7269.4701597725125 7273.715178729968 0.9529711094208373 0.9147369398177916 0.9985393313146251 0.9897715140702352 1.0441649838990898 0.9886088527530509 1.0112375609657622 1.024664303593363 1.0751875605331307 0.9994163891693383 1.0 12.828476719078267 -6.0419791214778655 0.8598727056645539 1.0321394594325952 0.9194172699460986 0.5077528579896652 0.028425868517833273 0.5741994667496956 0.5803691897877888 0.005254012665745103 0.047225279268786585 9.078641743123669e-07 6.0419791214778655 -0.1127221894864966 GHTDTEGRPPS(ph)PPPTST(ph)PEK ddPTM_A549_MK2206_60min_R1 3 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHTDT(0.005)EGRPPS(0.995)PPPT(0.043)S(0.182)T(0.775)PEK;GHTDT(0.003)EGRPPS(0.985)PPPT(0.023)S(0.108)T(0.881)PEK;GHT(0.001)DT(0.003)EGRPPS(0.929)PPPT(0.056)S(0.122)T(0.889)PEK 99.387 1.789e-07 186085000.0 10978.1 14150.7 13063.599999999999 12569.6 18032.6 13135.1 14331.2 13163.2 20259.800000000003 18584.0 21087.7 True False 12830.934891224075 14870.910187473448 14916.214915881017 15649.152564270786 15380.02842764077 14525.047563626282 16934.993533942477 15029.12391060932 15670.987648252534 14385.861492851458 15851.042099087885 0.8094694854139846 0.9381660899335548 0.9410242445031005 0.9872633273222637 0.9702850028091075 0.9163465387844812 1.0683836070889603 0.9481473720566385 0.9886408445760351 0.9075656605365563 1.0 13.952290070498668 -4.073731338449296 0.7339019094625685 0.9905825465590781 7.949286113802601e-13 0.49914544237355496 0.04407053835178195 5.152590276453308 0.5233390429667772 0.0052182275747515924 6.3267913669664555 8.438566196071172e-05 4.073731338449296 -0.9905825465582832 GHTDTEGRPPS(ph)PPPTST(ph)PEK ddPTM_A549_PD325901_60min_R1 2 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHTDT(0.002)EGRPPS(0.996)PPPT(0.018)S(0.24)T(0.743)PEK;GHT(0.003)DT(0.013)EGRPPS(0.969)PPPT(0.033)S(0.118)T(0.866)PEK 100.23 1.2128000000000001e-08 210350000.0 23294.0 22173.0 25959.0 26143.0 29310.0 28664.0 26118.0 27983.0 27341.0 25879.0 29247.0 True False 25658.789731863533 24041.596526150275 27720.733844148064 27757.793734939176 27251.366714010746 28430.569887518905 27111.93478231799 27424.85711276116 26191.952850888643 24244.995523462236 25649.8044120084 1.0003503075388336 0.9373013587150312 1.080738605210187 1.0821834462778157 1.0624395522194525 1.1084127360522344 1.0570035680125913 1.0692033620311638 1.0211365525511151 0.9452312046524425 1.0 14.646660204410965 -2.0499751442358125 16.989909494387256 1.0289799909206059 0.19368538809090896 0.0 0.05434047084426487 0.0 0.0 0.00686204780091354 0.0 0.008913019481235412 2.0499751442358125 -0.8352946028296969 GHTDTEGRPPS(ph)PPPTSTPEK ddPTM_A549_MK2206_60min_R1 4 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 GHTDTEGRPPS(1)PPPTSTPEK;GHTDTEGRPPS(0.99)PPPT(0.009)S(0.001)TPEK;GHTDTEGRPPS(1)PPPTSTPEK;GHTDTEGRPPS(1)PPPTSTPEK 182.02 5.7736e-44 412122000.0 23210.2 27373.7 23290.9 18847.199999999997 30559.3 25736.7 22366.9 21448.100000000002 36184.6 38144.9 38040.0 True False 27127.514325091677 28766.904407473947 26593.899842638577 23464.764846082944 26064.06745165992 28460.14051136121 26430.676208156892 24488.43385705146 27988.84587493258 29527.940597216406 28593.61814940951 0.9487261871982399 1.0060603123801601 0.9300641738893674 0.8206294398796647 0.9115344310561891 0.9953319080729538 0.9243557800222885 0.8564300512475429 0.9788493966969543 1.0326759084116184 1.0 14.80340556530867 -8.972049659104226 23.532140997129005 0.9906689495932366 0.9250828561535993 0.3117849972543457 0.05199262509243732 98.88756110965831 83257.1992834414 0.00919198739593654 0.00962273951363097 1.0664741690018028e-09 8.972049659104226 -0.06558609343963728 GHTDTEGRPPS(ph)PPPTSTPEK ddPTM_A549_PD325901_60min_R1 4 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 GHTDTEGRPPS(0.998)PPPT(0.002)STPEK;GHTDTEGRPPS(0.998)PPPT(0.002)STPEK;GHTDT(0.002)EGRPPS(0.998)PPPTSTPEK;GHTDTEGRPPS(0.997)PPPT(0.003)STPEK 182.33 3.7209999999999997e-44 468002000.0 52507.7 52446.1 54818.1 55184.5 66062.9 58396.4 58712.4 61855.7 61371.6 64473.0 67914.0 True False 57838.24304987427 56865.91690660394 58538.385914014165 58593.121231907186 61422.86980863259 57920.839079664736 60946.73251065806 60621.939538642095 58792.36507748795 60402.16377696902 59561.00854231676 0.9710756158331586 0.9547507387522154 0.9828306697060705 0.9837496487366914 1.031259733706373 0.9724623624953106 1.0232656229680324 1.0178125089263987 0.9870948547776401 1.0141225821261008 1.0 15.862080562728696 -6.114461404351926 2.2375477858129504 0.9983744359245085 0.9634108383692114 0.4258622920872618 0.017782331348523625 0.23639819258474373 2.2723990254907993 0.0023717999523497294 0.008364728046877863 7.683137325053661e-07 6.114461404351926 -0.0349635975552971 GHTGGHHS(ph)PVK ddPTM_A549_MK2206_60min_R1 4 GHTGGHHSPVK 11 0 H7C280;A0A0A0MQU4;Q96I15-2;Q96I15 H7C280 SCLY Selenocysteine lyase 1 GHTGGHHS(1)PVK;GHT(0.003)GGHHS(0.997)PVK;GHTGGHHS(1)PVK;GHT(0.001)GGHHS(0.999)PVK 100.38 0.00032291 595127400.0 3701.58 3374.7400000000002 2273.3399999999997 618.4300000000001 4253.1 3784.25 3365.88 3170.79 4720.68 4818.42 4419.65 True False 4326.316209057776 3546.499851320015 2595.733795957388 769.9453777623775 3627.474624047503 4184.696823218151 3977.41682734358 3620.2591926371183 3651.4535173769154 3729.935575461976 3322.1289288653447 1.3022722181150888 1.0675382946474936 0.7813464954365714 0.23176264204332014 1.0919126565284891 1.2596431122399008 1.1972493881211423 1.08974072655079 1.0991305863087166 1.1227546116748441 1.0 11.697892348758664 GHTGGHHS(ph)PVK ddPTM_A549_PD325901_60min_R1 5 GHTGGHHSPVK 11 0 H7C280;A0A0A0MQU4;Q96I15-2;Q96I15 H7C280 SCLY Selenocysteine lyase 1 GHTGGHHS(1)PVK;GHT(0.016)GGHHS(0.984)PVK;GHTGGHHS(1)PVK;GHT(0.001)GGHHS(0.999)PVK;GHT(0.01)GGHHS(0.99)PVK 142.39 3.5122e-11 477229000.0 12663.339999999998 11564.93 9603.0 9389.300000000001 12061.689999999999 9873.7 8547.029999999999 4877.330000000001 10617.73 12483.099999999999 14541.47 True False 13948.912954541802 12539.547238225368 10254.717327530103 9969.255736352541 11214.518504971547 9793.291860814801 8872.291903764275 4780.047826958636 10171.50373225068 11694.914935620829 12752.961375973195 1.093778342403028 0.9832655230847086 0.8041047898765045 0.7817208444726255 0.879365833107587 0.7679229609575653 0.695704444026611 0.3748186547451112 0.7975797489212171 0.9170352352555742 1.0 13.638544674974593 -5.575624866878413 3.246596354387072 0.8294752205565004 1.0811745706040043 0.2535019889449156 0.15738612182851094 0.3283099839575465 6.66213318764496 0.025503277525039943 0.14225035459043409 2.6568995369708865e-06 5.575624866878413 0.251699350047504 GHTNQVSR ddPTM_A549_MK2206_60min_R1 1 GHTNQVSR 8 0 O75083;O75083-3 O75083 WDR1 WD repeat-containing protein 1 0 82.75 0.0037384999999999996 3442900.0 677.53 763.22 416.25 543.39 552.81 532.65 521.9 430.29 565.35 956.33 862.23 False True 791.8804999818769 802.0646380238062 475.2805091043413 676.5205743937039 471.49238130297874 589.0146694555455 616.7224744169769 491.2849252078587 437.29912767843587 740.2943887999697 648.1144946626016 1.2218219257603824 1.2375354117660162 0.733328004570805 1.043828798715403 0.7274831610554096 0.9088126778620765 0.9515640824203956 0.7580218144382252 0.6747251161325856 1.1422277929231557 1.0 9.340104889135883 -5.751389149241988 24.974828004074205 0.8483979711243681 1.2296789184633987 0.4508107587974254 0.14400778154098687 114.03135410220521 283361.87779897323 0.01861124098843854 0.07040381528702576 1.7726004317873408e-06 5.751389149241988 0.3812809473390306 GHVS(ph)PAEDQTIQAPPVSVSALAR ddPTM_A549_MK2206_60min_R1 2 GHVSPAEDQTIQAPPVSVSALAR 23 0 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 GHVS(0.998)PAEDQT(0.002)IQAPPVSVSALAR;GHVS(1)PAEDQTIQAPPVSVSALAR 91.67 2.7168e-07 10482000.0 3661.9 4214.799999999999 3720.8 2895.8999999999996 5615.8 4737.0 3973.2 4479.2 6117.1 4867.5 5919.2 True False 4279.939195140634 4429.3153171336435 4248.465389250287 3605.3956300018885 4789.723259205275 5238.266195833888 4695.079010066166 5114.140316974692 4731.5866170014315 3767.9283693744324 4449.299278390767 0.9619355604886649 0.9955085149353335 0.9548616812278995 0.8103288640331465 1.0765118189436864 1.1773238588995245 1.0552400987879362 1.1494260100265465 1.0634453474464327 0.8468588273381389 1.0 12.11936242811367 -6.811187026522075 24.99999865264213 1.0557598937949715 0.9370186067213108 0.292340915042427 0.09105474123167169 86.13904401490908 43287.7003995223 0.010542664929709494 0.019923788614379028 1.544589127507927e-07 6.811187026522075 -0.11874128707366072 GHVS(ph)PAEDQTIQAPPVSVSALAR ddPTM_A549_PD325901_60min_R1 2 GHVSPAEDQTIQAPPVSVSALAR 23 0 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 GHVS(1)PAEDQTIQAPPVSVSALAR;GHVS(1)PAEDQTIQAPPVSVSALAR 144.23 1.3062999999999998e-27 16791800.0 5714.099999999999 6719.900000000001 7372.2 6850.2 7879.3 8334.4 7252.1 6748.799999999999 8180.9 7413.4 7855.5 True False 6294.191225501909 7286.209556491103 7872.5218246399445 7273.3212960670235 7325.885150109345 8266.527409661516 7528.082634001391 6614.189889668819 7837.085222846085 6945.316658821242 6889.323300117346 0.9136153075287815 1.05760888828762 1.1427133670016403 1.0557381297439092 1.0633678854909543 1.199904119686285 1.0927172823887021 0.9600637974931674 1.137569668520651 1.008127555677775 1.0 12.750146566646782 -5.272022650812209 4.703692409874681 1.0739203403057649 0.905417190085196 0.32203764955789194 0.06622984490884976 0.16382830328179523 9.828773697034467 0.009529729963560692 0.08874848580553876 5.345364796939792e-06 5.272022650812209 -0.16850315022056883 GHVS(ph)PQVELPPYLER ddPTM_A549_PD325901_60min_R1 2 GHVSPQVELPPYLER 15 0 Q8N5D0-5;Q8N5D0-3;Q8N5D0-6;Q8N5D0-2;Q8N5D0-4;Q8N5D0 Q8N5D0-5 WDTC1 WD and tetratricopeptide repeats protein 1 1 GHVS(1)PQVELPPYLER;GHVS(1)PQVELPPYLER 54.368 0.0049328 2414100.0 516.4200000000001 485.5 404.42 536.28 278.91999999999996 586.66 411.28999999999996 342.90999999999997 628.68 423.58000000000004 546.9300000000001 True False 568.8465782316894 526.4147888623979 431.86637317502084 569.404797619752 259.32962142176297 581.8824354665028 426.94186601652365 336.07039104230887 602.2587658935911 396.83508651138504 479.661077274926 1.185934413239132 1.0974723899906396 0.9003573432069185 1.1870981920290102 0.5406517929181978 1.2131116386852185 0.8900907041323567 0.700641363171697 1.2555923222187906 0.8273239278990573 1.0 8.905871564688923 -8.803985069510292 24.999997069507653 1.120696285829721 0.9658272304424718 0.0 0.22479090670018512 240.7783846818774 141481.1545903462 0.03568276218776049 0.0379873380677187 1.5704167923294785e-09 8.803985069510292 -0.15486905538724915 GHVT(ph)PNLSR ddPTM_A549_MK2206_60min_R1 2 GHVTPNLSR 9 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 GHVT(0.998)PNLS(0.002)R;GHVT(1)PNLSR 79.86 0.0015306 53775000.0 1446.79 1116.6599999999999 1369.2800000000002 1073.24 1616.22 1056.6 1287.03 1474.65 1819.6599999999999 1895.6299999999999 2006.11 True False 1690.972781380572 1173.4932243595083 1563.4644937090518 1336.1838481795749 1378.4761789936874 1168.4087106856841 1520.866691413838 1683.6861534262205 1407.5099153999158 1467.405866427788 1507.9375211806496 1.1213811962558062 0.7782107732425904 1.0368231254600835 0.8861002723331673 0.9141467465537965 0.7748389401245689 1.0085740755512638 1.1165490146488082 0.9334006851277874 0.9731211312249017 1.0 10.558360938898527 GHVT(ph)PNLSR ddPTM_A549_PD325901_60min_R1 1 GHVTPNLSR 9 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 GHVT(1)PNLSR 82.505 0.0013424 27581000.0 1277.0 1357.2 1315.8 1089.1 1420.0 1133.9 1386.3 1187.9 1280.3 1304.9 1701.6 True False 1406.640099922286 1471.576007093814 1405.0981005481735 1156.3712334744391 1320.2640987340587 1124.665894343347 1439.056405112467 1164.2064026104774 1226.4934433631804 1222.5083913043727 1492.3139873311286 0.9425899052503939 0.9861034739248121 0.941556611059491 0.7748846712497192 0.8847093238703968 0.7536389150615095 0.9643120799839797 0.7801350201726364 0.8218735827549638 0.8192031983099755 1.0 10.543335399549585 GHYEVT(ph)GSDDETGKLQGSGVSLASK ddPTM_A549_MK2206_60min_R1 1 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.53)GS(0.459)DDET(0.011)GKLQGSGVSLASK 66.51100000000001 0.00011865 6858000.0 2105.3 2489.5 2347.7 1816.7 3044.2 2064.7 2244.6 2294.7 2980.4 3164.2 3207.0 True False 2460.6231703568037 2616.204916485767 2680.6391621003277 2261.7915815547613 2596.4022126273544 2283.1851835630614 2652.41476542699 2619.9807522240185 2305.344158720811 2449.4050223676595 2410.613391302744 1.020745665495135 1.0852859798774774 1.1120153782318685 0.9382639247401027 1.0770711811337805 0.9471386792260298 1.1003069903272926 1.0868523180351737 0.9563309351214367 1.0160920167476344 1.0 11.235184578002393 -8.771364982800987 24.989211719858485 0.9793784956815438 1.0454374176934629 0.1484466947003663 0.05705651288373619 216.196702543681 544306.6093156312 0.009434328558344992 0.01010151828987815 1.69291447042562e-09 8.771364982800987 0.0660589220119191 GHYEVT(ph)GSDDETGKLQGSGVSLASK ddPTM_A549_PD325901_60min_R1 1 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHY(0.001)EVT(0.532)GS(0.467)DDETGKLQGSGVSLASK 83.788 4.4521e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GHYEVT(ph)GSDDETGKLQGSGVSLASKK ddPTM_A549_MK2206_60min_R1 1 GHYEVTGSDDETGKLQGSGVSLASKK 26 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.53)GS(0.47)DDETGKLQGSGVSLASKK 98.29 1.1039e-09 8087900.0 1396.0 1362.7 1976.3 1151.5 2635.6 1189.2 1073.4 1162.6 2825.1 2467.3 2998.7 True False 1631.6106710768536 1432.055609437699 2256.5690574003843 1433.6175516927988 2247.9067313582077 1315.0403546729276 1268.4228856853485 1327.4021103131765 2185.2193607576714 1909.9352163857307 2254.040030090283 0.7238605567317725 0.6353283838443365 1.0011219975139483 0.636021336158514 0.9972789752399253 0.583414818334107 0.5627330787175698 0.5888990845739368 0.9694678584169355 0.847338641234881 1.0 11.13829742160076 -8.825880534153207 8.92294589546815 0.9860290504908352 0.7201917755015308 0.28867688736446473 0.15087424665245297 0.21312217395417357 27.302879678659487 0.024711604932657144 0.026287243294135343 1.4932051043645306e-09 8.825880534153207 -0.26583727498930443 GHYEVTGS(ph)DDETGK ddPTM_A549_MK2206_60min_R1 3 GHYEVTGSDDETGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.005)GS(0.995)DDETGK;GHYEVT(0.155)GS(0.753)DDET(0.091)GK;GHYEVTGS(1)DDETGK 180.11 1.1423e-23 663225000.0 10094.0 10569.900000000001 9126.2 7638.599999999999 11225.400000000001 10386.3 10331.2 11598.6 13209.5 12241.0 13347.4 True False 11797.6204253938 11107.862762306844 10420.432389640937 9510.05734290978 9574.158530197465 11485.371372132047 12208.24531078113 13242.737069222776 10217.569341236924 9475.749598256276 10032.872210500222 1.1758966104488626 1.1071468398333189 1.0386290357346626 0.9478898109513173 0.9542789272425223 1.1447740119834944 1.2168245597710496 1.3199347894975846 1.0184091979705874 0.944470277249134 1.0 13.292447059343596 -8.962366128852471 24.999976949505253 1.0081213805043718 1.108250324213694 0.2146379838664204 0.10483628963773028 236.25873273837107 156946.31843326014 0.01960879006963283 0.020827120401890106 1.0905205932361483e-09 8.962366128852471 0.10012894370932224 GHYEVTGS(ph)DDETGK ddPTM_A549_PD325901_60min_R1 5 GHYEVTGSDDETGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVTGS(1)DDETGK;GHYEVT(0.045)GS(0.719)DDET(0.236)GK;GHYEVT(0.001)GS(0.999)DDETGK;GHYEVT(0.003)GS(0.997)DDETGK;GHYEVT(0.131)GS(0.847)DDET(0.021)GK 271.8 5.4631e-84 969019000.0 50372.6 47598.9 49138.7 49068.6 55703.2 42107.3 45575.8 43932.5 49083.7 50729.9 48712.100000000006 True False 55486.389269651794 51610.22635135409 52473.54767700753 52099.455979123886 51790.799397607734 41764.39210943082 47310.21200903473 43056.23182312049 47020.88278216461 47526.80545638109 42720.82051144372 1.2988137541690832 1.2080813461325992 1.2282897905238344 1.2195331305766444 1.2123081620994245 0.9776121247072793 1.1074275129233915 1.0078512375853577 1.1006549551071714 1.112497486878792 1.0 15.382651735760849 -7.176277283241489 6.113351751184053 1.0460730574313095 1.2327501818113586 0.7852505095609088 0.047505447461106846 0.08153300910630684 4.766309972000671 0.007005633902797014 0.012205367022871531 6.663811701372085e-08 7.176277283241489 0.18667712438004913 GHYEVTGS(ph)DDETGKLQGSGVSLASK ddPTM_A549_MK2206_60min_R1 5 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.031)GS(0.966)DDET(0.004)GKLQGSGVSLASK;GHYEVT(0.004)GS(0.996)DDETGKLQGSGVSLASK;GHYEVTGS(1)DDETGKLQGSGVSLASK;GHYEVT(0.004)GS(0.995)DDETGKLQGSGVSLASK;GHYEVT(0.002)GS(0.998)DDETGKLQGSGVSLASK 351.52 1.2723999999999993e-256 1612110000.0 31890.9 36689.9 33689.899999999994 28989.0 48277.99999999999 37268.0 34777.4 39030.1 60735.0 54538.4 57606.299999999996 True False 37273.304262353035 38557.25919476646 38467.63441122965 36091.30630136564 41176.37015347988 41211.67502350377 41096.003414042905 44562.73619966823 46978.6194738654 42218.1375614362 43301.0658570013 0.8607941519371713 0.8904459608938745 0.8883761554107302 0.8334969494874473 0.9509320230005869 0.9517473578965101 0.9490760238964913 1.0291371659726232 1.0849298635975606 0.9749907242666637 1.0 15.402114916919107 -7.630779640235889 1.0319209702957692 1.040207482626903 0.8743215128957692 0.7213409453057558 0.037783736872395696 0.17392497160969259 0.37289870565165095 0.007167427754635523 0.013044449810496505 2.3400242590300737e-08 7.630779640235889 -0.1658859697311338 GHYEVTGS(ph)DDETGKLQGSGVSLASK ddPTM_A549_PD325901_60min_R1 6 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.002)GS(0.998)DDETGKLQGSGVSLASK;GHYEVT(0.079)GS(0.92)DDET(0.001)GKLQGSGVSLASK;GHYEVT(0.13)GS(0.87)DDETGKLQGSGVSLASK;GHYEVT(0.005)GS(0.995)DDETGKLQGSGVSLASK;GHYEVT(0.018)GS(0.964)DDET(0.018)GKLQGSGVSLASK;GHYEVT(0.043)GS(0.943)DDET(0.013)GKLQGS(0.001)GVSLASK 339.53 8.953499999999995e-233 2847361500.0 85081.70000000001 82519.3 85066.2 82364.3 106916.7 98185.0 92273.8 107153.6 99758.4 101110.2 110295.40000000001 True False 93719.13155016271 89473.49101250863 90839.3038766159 87451.75574810266 99407.23983459144 97385.41391313304 95785.32995316095 105016.33738762695 95565.90136718084 94726.0847164253 96729.7650201467 0.9688758318666757 0.9249840624948613 0.9391039444549054 0.9040832026200866 1.027679947468983 1.006778150374394 0.9902363552026716 1.0856672438494432 0.9879678850380391 0.9792857937440035 1.0 16.56167227379546 -6.764418179206591 24.99999663317946 1.0037920927202553 0.93394493606131 0.5813413432032336 0.030970660738075768 44.538923639443574 373803.5345260543 0.004348877869143564 0.00848085778434828 1.720211397401855e-07 6.764418179206591 -0.06984715665894525 GHYEVTGS(ph)DDETGKLQGSGVSLASKK ddPTM_A549_MK2206_60min_R1 2 GHYEVTGSDDETGKLQGSGVSLASKK 26 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.146)GS(0.854)DDETGKLQGSGVSLASKK;GHYEVT(0.001)GS(0.999)DDETGKLQGSGVSLASKK 172.83 1.188e-48 20130800.0 3126.6 4203.2 4333.2 3202.5 6085.200000000001 4262.8 4338.1 4085.3999999999996 8231.7 7122.5 9623.8 True False 3654.2936419691164 4417.124926681248 4947.712917840077 3987.1126437656862 5190.075141015697 4713.886666582369 5126.276616724065 4664.517961012774 6367.233093323743 5513.522303208914 7233.944856632156 0.5051591786214435 0.6106108097619215 0.6839577873342457 0.5511671325653332 0.7174612530060113 0.6516343101870107 0.708641926130283 0.6448097204855378 0.8801882264123422 0.7621736704495418 1.0 12.82056688523159 -8.828738444168513 0.5871664845179403 0.9915711169847478 0.6001472966641647 0.5321413479187864 0.09233159940862923 0.17069073167970086 0.13148144638320955 0.020838482888165314 0.019563242116739644 1.4834112073373517e-09 8.828738444168513 -0.3914238203205831 GHYEVTGS(ph)DDETGKLQGSGVSLASKK ddPTM_A549_PD325901_60min_R1 4 GHYEVTGSDDETGKLQGSGVSLASKK 26 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.118)GS(0.882)DDETGKLQGSGVSLASKK;GHYEVT(0.015)GS(0.985)DDETGKLQGSGVSLASKK;GHYEVT(0.135)GS(0.865)DDETGKLQGSGVSLASKK;GHYEVT(0.001)GS(0.999)DDETGKLQGSGVSLASKK 209.05 3.0079999999999993e-81 88390000.0 10093.900000000001 9455.7 10655.7 10820.7 11196.900000000001 16076.7 13223.7 15226.7 15344.2 13848.0 16322.7 True False 11118.625297263565 10252.565023782034 11378.859879929458 11489.070063407273 10410.468371208017 15945.7766854129 13726.935139786296 14922.991523384937 14699.336634892856 12973.63491668553 14315.111378120468 0.7767054690372522 0.7162057460099319 0.7948844811170075 0.8025833512526784 0.7272362817322963 1.113912163462785 0.9589122136183199 1.04246422743127 1.0268405356146684 0.9062894848666508 1.0 13.805251274758316 -7.253161533319855 24.998969455362744 1.0172994149109287 0.7648066333233017 0.8340994488589173 0.054219082921898365 128.98324980517665 389527.2872020083 0.00577136702895123 0.009892201855101986 5.582625136043199e-08 7.253161533319855 -0.252492781587627 GHYEVTGSDDET(ph)GK ddPTM_A549_MK2206_60min_R1 1 GHYEVTGSDDETGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVTGS(0.002)DDET(0.998)GK 220.4 2.4545999999999995e-39 46765000.0 4060.4 3244.4 3497.6 3163.2 5172.6 4167.3 3847.4 4135.7 4505.3 5021.5 4713.0 True False 4745.696252751041 3409.5261020471658 3993.612273017041 3938.1841420014443 4411.717392101785 4608.280919970142 4546.422778447743 4721.948140050061 3484.856743485731 3887.13966241679 3542.6320278172184 1.3395961577401216 0.9624273916328631 1.1273008999124565 1.1116548687750514 1.24532194070973 1.3008071071975038 1.2833460384111661 1.3328926354678372 0.9836914238120616 1.0972462372310903 1.0 11.790605905576097 -8.783705727204836 24.85940668104037 0.9922986823478841 1.2046966429933927 0.34357286056568714 0.11127122299995776 147.26259938702393 164411.5280885476 0.01903839390263525 0.02027568019836506 1.6454863075830448e-09 8.783705727204836 0.21239796064550864 GIALPETVDDVEKLGS(ph)PHSCK ddPTM_A549_PD325901_60min_R1 1 GIALPETVDDVEKLGSPHSCK 21 1 O75751 O75751 SLC22A3 Solute carrier family 22 member 3 1 GIALPETVDDVEKLGS(0.999)PHS(0.001)CK 121.62 2.9416e-15 4881200.0 1176.6 1375.9 1309.6 1603.7 1415.1 1318.8 1398.4 1442.2 1319.6 1270.8 1815.2 True False 1296.0475658328596 1491.8519217214707 1398.4773312645445 1702.7569067330433 1315.708257829975 1308.0601300467458 1451.6168772338415 1413.4341896159874 1264.1418010326117 1190.561471123916 1591.9419075008598 0.8141299376102765 0.9371271116692209 0.8784725904100174 1.0696099516634678 0.8264800691725395 0.8216757934969052 0.9118529202568012 0.8878679447762601 0.7940878967230335 0.7478674099313972 1.0 10.63657197526125 -11.097353991479157 1.4500505773051133 0.9996237460492312 0.8748637252497632 0.0 0.10412739924920315 0.45336561786763785 1.7121971701204737 0.053957848595732834 0.011935747828695617 7.991825793277024e-12 11.097353991479157 -0.12476002079946802 GIAPAS(ph)PMLGNASNPNK ddPTM_A549_MK2206_60min_R1 5 GIAPASPMLGNASNPNK 17 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(0.999)PMLGNAS(0.001)NPNK;GIAPAS(1)PMLGNASNPNK;GIAPAS(1)PMLGNASNPNK;GIAPAS(0.995)PMLGNAS(0.005)NPNK;GIAPAS(1)PMLGNASNPNK 179.56 1.0568e-30 53276700.0 8135.8 8330.1 8627.5 6966.1 11502.599999999999 9800.8 9267.1 10136.0 12872.7 12119.1 13054.0 True False 9508.924138787295 8754.06650926615 9851.009230745229 8672.794812720116 9810.582777402074 10837.914150755489 10950.812114714638 11572.809040198134 9957.054003477848 9381.386892919505 9812.331527928283 0.9690789708564762 0.8921494839783946 1.0039417443965137 0.8838668758831917 0.9998217803259876 1.1045197688141852 1.1160254913468792 1.1794148013914025 1.014749040545323 0.9560813213676888 1.0 13.260380263524778 -6.98707337958622 16.165450040308166 1.0373028871811325 0.9391777108347643 0.4040598658020933 0.0672631779819788 3.573787643667145 4465.235815216633 0.010317751092560805 0.01944446566351079 1.0302120382851604e-07 6.98707337958622 -0.09812517634636819 GIAPAS(ph)PMLGNASNPNK ddPTM_A549_PD325901_60min_R1 5 GIAPASPMLGNASNPNK 17 0 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(1)PMLGNASNPNK;GIAPAS(1)PMLGNASNPNK;GIAPAS(1)PMLGNASNPNK;GIAPAS(1)PMLGNASNPNK;GIAPAS(1)PMLGNASNPNK 224.55 1.5157999999999996e-63 85393600.0 16858.300000000003 17555.3 16315.099999999999 16443.6 22596.3 16900.8 18344.5 18939.4 18919.399999999998 19690.1 20347.8 True False 18569.742205575487 19034.746741330706 17422.34079666628 17459.28382587482 21009.213841003086 16763.165488242375 19042.609985995576 18561.63880932812 18124.283411985747 18446.86372566651 17845.149595331655 1.0406044570471624 1.0666622120282059 0.9763067943809235 0.9783769944098547 1.1773066809425436 0.9393681682908206 1.0671028496716655 1.040150361876703 1.015641999253798 1.033718637499809 1.0 14.123244375054542 -9.04222170810378 2.1229153565641616 1.0056457365445806 1.0353118122612002 0.012260717184837455 0.05956700488844396 0.7317759169471431 6.706901284298388 0.010784186064066096 0.010608817260357556 9.0735720446073e-10 9.04222170810378 0.02966607571661961 GIAPAS(ph)PMLGNASNPNKADIPER ddPTM_A549_MK2206_60min_R1 6 GIAPASPMLGNASNPNKADIPER 23 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(0.989)PMLGNAS(0.011)NPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER 141.38 1.5302999999999998e-27 122385000.0 16034.1 18533.7 16607.2 16591.5 26149.5 17941.3 18704.8 17586.9 29223.9 28042.199999999997 28208.4 True False 18740.264083892096 19476.98616616679 18962.350680594867 20656.418244820736 22302.9431900332 19839.83645752892 22103.220041147102 20079.896932622407 22604.733310978743 21707.44754384627 21203.475767765598 0.8838298158824424 0.9185751609543427 0.8943038815090033 0.9741996298655656 1.0518531694666333 0.9356879350738458 1.0424338105335227 0.9470096861736554 1.0660862190029898 1.0237683567354947 1.0 14.372013156691647 -6.244164655328661 0.7482335477169416 1.0244424153448066 0.868284905642209 0.5416040340022426 0.04187377972188512 0.566099532782602 0.44901950224228293 0.0072867288565034855 0.05605133758277487 5.699481452167535e-07 6.244164655328661 -0.15615750970259767 GIAPAS(ph)PMLGNASNPNKADIPER ddPTM_A549_PD325901_60min_R1 4 GIAPASPMLGNASNPNKADIPER 23 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;H0YKP9 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER 218.0 1.8013999999999996e-74 202457000.0 32140.699999999997 31319.5 33241.6 32856.2 38917.0 40904.8 36822.6 41284.6 42053.1 41290.0 43166.1 True False 35403.60020326721 33958.9041807948 35497.574873979436 34885.65285215578 36183.60417636151 40571.684870743215 38223.90419309985 40461.14626585784 40285.75445059455 38682.942353404535 37856.943352453105 0.9351943677453051 0.8970323849084421 0.937676730619595 0.9215126675010652 0.9557983548615483 1.0717105312231765 1.0096933563079906 1.068790628159259 1.0641576123969887 1.021818956519053 1.0 15.20827030912563 -7.084006818687355 4.306890667004078 1.034955662507469 0.9233388406662608 0.8372121305774742 0.0243680838085251 0.08207077613321988 2.7599649671065833 0.004365808023714938 0.007817653747660101 8.241251756452167e-08 7.084006818687355 -0.11161682184120814 GIASTSDPPTANIKPTPVVS(ph)TPSK ddPTM_A549_MK2206_60min_R1 1 GIASTSDPPTANIKPTPVVSTPSK 24 1 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPTPVVS(0.685)T(0.315)PSK 171.63 1.4565e-41 53594000.0 1633.0 2109.7 2036.8 1564.1 2759.1 1864.8 1936.5 2237.5 2800.8 2850.7 2407.4 True False 1908.610476983167 2217.0747187427282 2325.648867132065 1947.304570215117 2353.2400449576703 2062.131898245942 2288.3369835379885 2554.672477056367 2166.423271958543 2206.7248901028643 1809.5761391400752 1.0547279198156059 1.2251900711933015 1.2851898391173702 1.0761108792805434 1.3004371543470663 1.1395662518107048 1.264570710257831 1.411751858239227 1.1971992916462992 1.2194705944517579 1.0 10.821436096019324 -10.287304541290183 0.9375385739045646 1.0128431085030951 1.2192987499381194 0.003702226354949878 0.1155513074721596 0.3840239680220823 0.658390965624182 0.04531985707214699 0.018182960913930363 5.1605436840543986e-11 10.287304541290183 0.20645564143502426 GIASTSDPPTANIKPTPVVS(ph)TPSKVTAAAMAGNK ddPTM_A549_MK2206_60min_R1 3 GIASTSDPPTANIKPTPVVSTPSKVTAAAMAGNK 34 2 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPT(0.008)PVVS(0.493)T(0.493)PS(0.006)KVTAAAMAGNK;GIASTSDPPT(0.005)ANIKPT(0.157)PVVS(0.388)T(0.388)PS(0.056)KVT(0.004)AAAMAGNK;GIASTSDPPTANIKPT(0.014)PVVS(0.484)T(0.484)PS(0.017)KVTAAAMAGNK 104.78 9.6926e-15 48298600.0 2054.19 3591.85 3245.56 2476.75 3814.6 3025.83 3218.95 2563.62 4361.2 4343.4 3895.6000000000004 True False 2400.8870518763324 3774.6598229682245 3705.829211119967 3083.553861185532 3253.4773931700656 3346.0213222166017 3803.791548236308 2927.020985756978 3373.3951634053124 3362.2229233776907 2928.2150069095605 0.8199148785902268 1.289065117848707 1.2655591212993273 1.053048991931749 1.111078723895957 1.1426829363011817 1.2990137470304242 0.9995922358331731 1.1520312393199552 1.1482158637408877 1.0 11.515805773398089 -10.839271054801044 0.6756959936201937 0.9809446160280871 1.1370829037715955 0.0 0.13954831686632982 1.7133891961953898 1.1013262043637284 0.16056199271997776 0.024680551982783423 1.4478679183990142e-11 10.839271054801044 0.15613828774350835 GIASTSDPPTANIKPTPVVS(ph)TPSKVTAAAMAGNK ddPTM_A549_PD325901_60min_R1 3 GIASTSDPPTANIKPTPVVSTPSKVTAAAMAGNK 34 2 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPT(0.002)ANIKPT(0.104)PVVS(0.431)T(0.431)PS(0.015)KVT(0.017)AAAMAGNK;GIASTSDPPTANIKPT(0.002)PVVS(0.556)T(0.439)PS(0.002)KVTAAAMAGNK;GIASTSDPPTANIKPTPVVS(0.499)T(0.499)PS(0.003)KVTAAAMAGNK 185.55 7.653499999999998e-77 104007000.0 5195.219999999999 5128.0 5687.6 6380.9 7929.9 7487.2 6551.8 7861.200000000001 7433.1 6571.6 6840.8 True False 5722.634909881175 5560.154556717567 6073.594738317212 6775.033700924658 7372.931180669866 7426.226725573252 6801.13233428253 7704.402199007903 7120.712656301537 6156.6680544837245 5999.4249674040775 0.9538639021194946 0.9267812476907131 1.0123628133222955 1.1292805123381988 1.2289396435038837 1.2378230856992525 1.13363070148127 1.284190108363262 1.1868991936709954 1.0262096930845832 1.0 12.550608512644779 -6.092958371814907 3.040989695844669 1.1302082266414244 0.9425536640866978 0.500527319556491 0.08349579052359571 0.2209862923527134 3.9064964953601558 0.014696539808102937 0.04625210354431997 8.073124094033153e-07 6.092958371814907 -0.18765456255472657 GIASTSDPPTANIKPTPVVST(ph)PSK ddPTM_A549_MK2206_60min_R1 1 GIASTSDPPTANIKPTPVVSTPSK 24 1 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPTPVVS(0.147)T(0.85)PS(0.003)K 174.86 1.3472999999999998e-41 59916000.0 1802.9 1865.0 2519.4 1719.1 2659.7 2493.4 2382.0 2550.2 3034.6 3210.7 2628.7 True False 2107.1854433269746 1959.920533940934 2876.6888039338796 2140.2795771733327 2268.4616532832847 2757.249933015032 2814.7785668925826 2911.698659659952 2347.2679452604248 2485.400640072006 1975.9212415707875 1.0664318997106568 0.9919021531358541 1.4558721994642934 1.083180610716997 1.1480526680708882 1.3954250174582445 1.4245398590152982 1.4735904439922185 1.1879359844294348 1.257843980712612 1.0 10.948309728214381 -9.905527937201423 1.125692576600304 1.0298729303738954 1.250775700276867 0.0068653721541258594 0.17585872804355113 0.4727725289887243 1.2131993781217547 0.05355011736827179 0.03205336391903267 1.2430026736658272e-10 9.905527937201423 0.22090276990297153 GIASTSDPPTANIKPTPVVST(ph)PSK ddPTM_A549_PD325901_60min_R1 3 GIASTSDPPTANIKPTPVVSTPSK 24 1 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPTPVVS(0.182)T(0.817)PS(0.002)K;GIASTSDPPTANIKPTPVVS(0.027)T(0.971)PS(0.002)K;GIASTSDPPTANIKPTPVVS(0.037)T(0.962)PS(0.001)K 220.13 2.6343e-75 199767100.0 9075.099999999999 8836.3 8753.2 9420.9 10693.3 7916.599999999999 10039.3 10420.6 7607.099999999999 8626.599999999999 9272.1 True False 9996.397471264474 9580.966011997542 9347.244789267575 10002.807596583723 9942.239497882327 7852.129834340369 10421.351055215748 10212.752958197445 7287.40004140284 8081.915003775235 8131.690480684622 1.2293135720068453 1.178225614311737 1.149483592799097 1.2301018613956847 1.2226534595110745 0.9656208451356701 1.281572519265189 1.255920030706532 0.8961728263898824 0.9938788278983786 1.0 12.98933958709514 -8.763750076408478 24.99999437282738 0.9509704928064415 1.1855444186149957 0.5914690398460125 0.08335057390618691 28.671144156973817 310199.63819262263 0.014568654888049728 0.015874773454816686 1.7228597444407488e-09 8.763750076408478 0.23457392580855418 GIASTSDPPTANIKPTPVVST(ph)PSKVTAAAMAGNK ddPTM_A549_MK2206_60min_R1 1 GIASTSDPPTANIKPTPVVSTPSKVTAAAMAGNK 34 2 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPT(0.003)PVVS(0.173)T(0.771)PS(0.046)KVT(0.007)AAAMAGNK 86.54299999999999 2.0313e-07 21683000.0 1146.8 956.15 1420.7 1306.1 1877.9 1354.3 1474.7 615.62 2096.2 1985.0 2081.4 True False 1340.3518034319013 1004.8139509531495 1622.1766229057957 1626.0945586330574 1601.6633976390876 1497.6111270884178 1742.6339011740113 702.8860202571797 1621.4140469435508 1536.587121357628 1564.53093628236 0.8567116011249011 0.6422461375808838 1.0368453478845316 1.0393495717617351 1.0237339259298777 0.9572269185338341 1.1138379310765563 0.44926310113584467 1.0363579328104284 0.9821391739359707 1.0 10.611514470680921 -5.769765485524654 24.992708973735464 0.9849770844367308 0.7494788550914206 0.16516694988962177 0.1751324086824699 176.00996620468013 528340.692080313 0.02303843734691909 0.07336752447708231 1.6991609339008935e-06 5.769765485524654 -0.23549822934531017 GIASTSDPPTANIKPTPVVST(ph)PSKVTAAAMAGNK ddPTM_A549_PD325901_60min_R1 1 GIASTSDPPTANIKPTPVVSTPSKVTAAAMAGNK 34 2 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPTPVVS(0.168)T(0.828)PS(0.004)KVTAAAMAGNK 146.59 3.4019999999999995e-40 28521000.0 1571.1 1542.0 1381.0 1949.5 2048.5 1872.3 1303.3 1955.4 1535.8 1947.3 1913.4 True False 1730.5969154173101 1671.9497516494714 1474.722964627623 2069.9161873642615 1904.6204269413497 1857.0526095590876 1352.897794693126 1916.3980130183766 1471.2556668883653 1824.3471456717034 1678.0639300419482 1.0313057115613282 0.9963564091432894 0.8788240651777539 1.2335144986475681 1.135010646998257 1.106663802440867 0.8062254187534478 1.1420292032440447 0.8767578162839046 1.087173803697752 1.0 10.712581964562329 -7.7145490374115 24.99998737922077 0.9492821175085653 1.063124172310523 0.07232154968426296 0.12060307613068058 159.93151490759712 85268.38683815395 0.017512907316806874 0.025975794528277855 1.9295274555168938e-08 7.7145490374115 0.11384205480195764 GIAYIEFK ddPTM_A549_MK2206_60min_R1 2 GIAYIEFK 8 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 146.35 0.0022875 10001300.0 3182.6 3852.8 4190.1 3504.4 5524.0 3950.8 3547.5 3130.6 5749.0 4841.3 4905.8 False True 3719.7450729005664 4048.8910633606592 4784.319186061504 4362.978157318496 4711.426917598549 4368.871033671211 4192.034830416223 3574.3721370604057 4446.860679266521 3747.646967571126 3687.5544668079197 1.0087295269486587 1.097988138156377 1.2974233273367712 1.1831630411401755 1.2776562244725107 1.184761085699451 1.1368062134808274 0.9693069402048755 1.2059105077072623 1.0162960306902868 1.0 11.84844864342416 -11.175875310996275 0.6738575841338645 0.9553939739151532 1.1610093577424052 0.24963879118549837 0.09510782816929407 1.5697276391914834 0.8053757430335684 0.2091792526951614 0.019000658978376724 6.6699824161742995e-12 11.175875310996275 0.20561538382725197 GIAYIEFK ddPTM_A549_PD325901_60min_R1 2 GIAYIEFK 8 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 146.35 0.0022875 16527900.0 5129.5 5268.4 5627.799999999999 5450.0 7029.3 6424.1 6840.799999999999 6358.4 6630.5 5843.2 6560.6 False True 5650.243063861682 5712.386557451406 6009.736350710601 5786.634122151949 6535.586217768529 6371.784259503565 7101.1303874293935 6231.576723931697 6351.843143184854 5474.259354793251 5753.687791069934 0.9820211434883893 0.9928217805487064 1.044501642935522 1.0057261242316884 1.1358951780303665 1.1074261396999945 1.234187645435119 1.0830578491942986 1.103960342277051 0.9514348976824268 1.0 12.490271223762331 -6.718784962168371 24.45531023913936 1.0764934409097355 1.0080381043745228 0.22964703754454685 0.0699900175318311 163.57197342830958 93780.6599733409 0.010360821543691792 0.021567605456471153 1.9107991430124986e-07 6.718784962168371 -0.06845533653521274 GICPKSPS(ph)AIPEQNHSLNDQAK ddPTM_A549_PD325901_60min_R1 2 GICPKSPSAIPEQNHSLNDQAK 22 1 Q13129 Q13129 RLF Zinc finger protein Rlf 1 GICPKS(0.413)PS(0.587)AIPEQNHSLNDQAK;GICPKS(0.391)PS(0.609)AIPEQNHSLNDQAK 182.33 1.1271e-49 11062800.0 2933.0 3119.3999999999996 3214.0 3459.4 2874.8999999999996 3200.5 3218.7 3770.8999999999996 2755.3 3294.3999999999996 3751.5 True False 3230.756000839519 3382.28278553525 3432.1213673520524 3673.0792811325623 2672.9769418665787 3174.436189122394 3341.1893898402227 3695.686441286179 2639.5043228138493 3086.39102177418 3290.0892827178704 0.981966057216132 1.0280215808433077 1.0431696748718176 1.1164071748528088 0.8124329500439852 0.9648480379535664 1.015531525965198 1.1232784656327788 0.8022591777914954 0.9380873151334606 1.0 11.683911019378401 -7.335678349991549 0.636166869637878 0.9212712323382745 1.0295777957723249 0.007554683566780129 0.09896863780024573 1.3783208238976672 1.0752537172503678 0.024010797606777056 0.06637975280917281 4.616593651417191e-08 7.335678349991549 0.10830656343405043 GIEFEDES(ph)SDRDAR ddPTM_A549_MK2206_60min_R1 2 GIEFEDESSDRDAR 14 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 GIEFEDES(0.5)S(0.5)DRDAR;GIEFEDES(0.5)S(0.5)DRDAR 53.403 0.005569600000000001 2653600.0 304.91 343.95 376.91999999999996 338.62 378.55 234.97 447.4 339.95 527.04 524.41 530.73 True False 356.3713536662203 361.45558587076897 430.37292370356334 421.58191520122944 322.8657964621528 259.8343694395372 528.6867887605969 388.1389535532119 407.66628150993665 405.9454167814376 398.9350935971641 0.893306603971212 0.9060511137577656 1.0788043734706991 1.056768186022094 0.8093191139212625 0.6513199104561913 1.3252451269540433 0.972937602589423 1.0218862367660968 1.0175725908720188 1.0 8.64001023005025 -7.75012231241901 24.9999909436808 1.0286690667693463 0.910802398013611 0.23878786138050556 0.14127469934762896 342.4087414185334 756396.566491164 0.021549507520280984 0.0318058293888333 1.7777786552753263e-08 7.75012231241901 -0.11786666875573537 GIEFEDES(ph)SDRDAR ddPTM_A549_PD325901_60min_R1 1 GIEFEDESSDRDAR 14 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 GIEFEDES(0.5)S(0.5)DRDAR 87.148 2.2666e-05 2204000.0 272.64 347.69 335.45 428.31 360.13 322.6 223.81 414.39 317.05 257.58 497.65 True False 300.31821209304013 376.99105651816114 358.2156542247185 454.76573593741347 334.8357111810537 319.97285255768924 232.3272120235313 406.12466636733404 303.7254910710743 241.31635484112223 436.4422048632672 0.688105340745235 0.863782311420291 0.8207630935622822 1.0419838660651228 0.7671937027399864 0.7331391166854118 0.5323206817184809 0.9305348150153551 0.6959122827413732 0.5529170922338369 1.0 8.769646809774486 -10.949150063985131 1.1763953985857236 1.0015204258099637 0.7827779282275797 0.0 0.18336313457224496 0.5239430402360092 1.2738666864561987 0.09382619912497767 0.021254222839632006 1.1242164506083243e-11 10.949150063985131 -0.21874249758238395 GIEFEDES(ph)SDRDARPALETQPQQEK ddPTM_A549_PD325901_60min_R1 1 GIEFEDESSDRDARPALETQPQQEK 25 2 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 GIEFEDES(0.628)S(0.372)DRDARPALETQPQQEK 229.7 6.515099999999998e-96 90512000.0 6061.8 6190.1 5790.0 5640.2 6146.1 5372.0 5187.7 6270.5 6018.5 5643.9 6468.8 True False 6677.1894735387 6711.761451157842 6182.944218098439 5988.58234417641 5714.419138893943 5328.252213080927 5385.120762318362 6145.429958387908 5765.5633748975315 5287.543190806002 5673.178609101787 1.1769750141175046 1.183068948400426 1.089855378108281 1.0555955940764148 1.0072693868171174 0.9392005047280768 0.9492246116980562 1.08324281356636 1.0162844803876838 0.9320248056923346 1.0 12.469941569860607 -6.070183017730951 1.5049561197646597 1.0043553321656677 1.1891774785422977 0.738290271997313 0.0428342469669624 0.15702729777563912 0.6395346191857305 0.0055397087217530306 0.027111389924740936 8.507794323691234e-07 6.070183017730951 0.18482214637662997 GIEFEDESS(ph)DRDARPALETQPQQEK ddPTM_A549_MK2206_60min_R1 2 GIEFEDESSDRDARPALETQPQQEK 25 2 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 GIEFEDES(0.019)S(0.981)DRDARPALETQPQQEK;GIEFEDES(0.297)S(0.703)DRDARPALETQPQQEK 245.69 2.7460999999999996e-112 106620000.0 5772.2 7512.9 5418.5 5475.4 8554.900000000001 6735.6 6940.1 6964.5 8753.3 8642.8 9581.5 True False 6746.406243259173 7895.274519809566 6186.924777373871 6816.873245800042 7296.4855426075055 7448.356721270578 8201.026335890525 7951.739202886727 6770.691526147784 6690.38547731471 7202.149114052772 0.9367212670028786 1.096238691365661 0.8590386951725278 0.9465054302331809 1.013098372036017 1.0341852970993628 1.1386915497054555 1.1040786683201769 0.9400932164729647 0.9289429268078451 1.0 12.814211754209365 -6.764962724149673 24.762001192286707 1.0013229824177492 0.9621992601563343 0.09076308746737227 0.07928157594002051 231.38424212435334 1626188.4772825404 0.012142628858072733 0.02361565932685852 1.7180558429665248e-07 6.764962724149673 -0.03912372226141492 GIEFEDESS(ph)DRDARPALETQPQQEK ddPTM_A549_PD325901_60min_R1 1 GIEFEDESSDRDARPALETQPQQEK 25 2 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 GIEFEDES(0.249)S(0.751)DRDARPALETQPQQEK 219.27 6.05e-82 88836000.0 7699.1 7600.2 8480.8 7357.6 8802.3 7333.9 7782.6 8273.2 7657.0 8335.3 8902.1 True False 8480.706964222143 8240.695526904216 9056.358087193306 7812.0622416780225 8184.056814286474 7274.1751499467955 8078.771101802131 8108.184535800157 7335.202917934763 7809.007735488803 7807.198135061378 1.086267674716247 1.05552534780641 1.1600010567840044 1.000623028458161 1.0482706692856507 0.9317267250179257 1.0347849461538763 1.0385524224608926 0.9395435841435956 1.0002317861537673 1.0 12.930589168252267 -6.651254132883824 1.720134250708076 0.9799843195353829 1.0940071011629364 0.4454567941309914 0.04575581334974429 0.2161498584594581 1.2838908390993764 0.006865525960184806 0.017960763678518538 2.232265602253844e-07 6.651254132883824 0.11402278162755353 GIFPVLCK ddPTM_A549_MK2206_60min_R1 1 GIFPVLCK 8 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 76.592 0.012809000000000001 623130.0 725.41 693.22 687.94 741.63 779.9 630.59 738.28 683.77 779.05 790.59 826.12 False True 847.8414734282665 728.5019370179807 785.500236476253 923.3293832930362 665.1777431272828 697.3186152482349 872.4159195488904 780.6964914578017 602.5964188872118 611.9951699113991 620.9716042479022 1.365346607845524 1.1731646536403468 1.2649535519866835 1.4869107974934517 1.0711886639855641 1.1229476685859112 1.4049207944146307 1.2572176990336819 0.9704089764572316 0.9855445333166643 1.0 9.278383488256916 -8.758275472490634 23.504481862012206 0.9860264372974459 1.2654679761259768 0.5455063727197259 0.11502722183428314 20.26766648061595 150566.46635685294 0.01913794332668552 0.021244468337025365 1.744715131064252e-09 8.758275472490634 0.27944153882853096 GIFPVLCK ddPTM_A549_PD325901_60min_R1 1 GIFPVLCK 8 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 118.03 0.0034669 1361100.0 1566.9 1505.2 2000.1 1389.2 1847.1 1890.5 1565.9 1810.2 1408.5 1440.4 1902.0 False True 1725.970534509186 1632.0484864998589 2135.8388135783566 1475.0077288978878 1717.3660681490705 1875.104394793278 1625.4911813933584 1774.094140925573 1349.3056431906896 1349.452898179798 1668.066057771395 1.0347135393517652 0.978407586975508 1.2804281962501685 0.8842621801612335 1.029555190664057 1.1241187877766032 0.9744765045846455 1.0635634797915832 0.8089042019075776 0.8089924807790423 1.0 10.703960707336838 -8.736732304161844 24.99797406881369 0.909760306380212 1.0459941909963064 0.328171490160275 0.10705913430101957 237.1507638994936 239942.87553025325 0.01845567290034637 0.02092223188622808 1.8334441952965587e-09 8.736732304161844 0.13623388461609443 GIGEFFRLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GIGEFFRLSPK 11 1 H0YMA4;A0A0U1RQM0;Q15004;H0YKX3 H0YMA4 KIAA0101 PCNA-associated factor 1 GIGEFFRLS(1)PK 88.075 8.526299999999999e-05 13497000.0 4922.3 5279.5 4171.7 4571.0 8158.4 6389.4 5671.0 5491.5 8575.5 7731.3 7402.9 True False 5753.063901319194 5548.203999432259 4763.309789382775 5690.8952051999895 6958.310167367131 7065.5220670595345 6701.347293387008 6269.9369420134235 6633.162942259533 5984.793960378956 5564.5556203539345 1.0338766100703058 0.9970614686890962 0.8560090174963161 1.0227043439702412 1.2504700540533993 1.2697369833478511 1.2042915464578945 1.1267632799067293 1.1920382137967793 1.0755205570212798 1.0 12.442050764698337 -6.532424991232814 24.37476387365195 1.1274896367351113 0.9613846660539996 0.4941529399806751 0.0863451881163232 131.51622090455473 335804.63070876367 0.015502109788136563 0.03230549553994027 2.934776337349398e-07 6.532424991232814 -0.16610497068111163 GIGEFFRLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GIGEFFRLSPK 11 1 H0YMA4;A0A0U1RQM0;Q15004;H0YKX3 H0YMA4 KIAA0101 PCNA-associated factor 1 GIGEFFRLS(1)PK;GIGEFFRLS(1)PK 83.087 0.0001781 13118000.0 2849.3 3037.1 2703.6 3471.0 3286.5 3592.2 3311.1 3273.5 3148.5 3241.7 2996.5 True False 3138.558838456201 3293.0470757033786 2887.0825540675205 3685.3957867870486 3055.667577809493 3562.9463141901147 3437.1057224034403 3208.2074744889305 3016.179494203683 3037.0185087680175 2627.9494963785396 1.1942995262204656 1.253086134357369 1.098606559237946 1.4023845556643035 1.1627573444696608 1.3557894925682752 1.3079040244646873 1.2208025606694568 1.1477311486998307 1.1556609108939109 1.0 11.359721835046704 -9.469611853632458 0.8169534128421124 1.0237737274117003 1.2534620864333728 0.3143437265191068 0.09194666666557574 0.2744269589959311 0.3926347673290825 0.026222282642079153 0.01776897452539036 3.391471300986094e-10 9.469611853632458 0.2296883590216725 GIGEFFRLS(ph)PKDSEKENQIPEEAGSSGLGK ddPTM_A549_MK2206_60min_R1 1 GIGEFFRLSPKDSEKENQIPEEAGSSGLGK 30 3 H0YMA4;A0A0U1RQM0;Q15004;H0YKX3 H0YMA4 KIAA0101 PCNA-associated factor 1 GIGEFFRLS(0.938)PKDS(0.062)EKENQIPEEAGSSGLGK 50.942 0.001454 3030100.0 1003.8 1447.5 1527.7 1027.7 1684.9 1116.8 1314.3 1239.6 1560.6 2454.5 2336.4 True False 1173.216899446235 1521.171567227615 1744.3508318527367 1279.486546135206 1437.0534419735334 1234.9790347281576 1553.0912974252399 1415.317096115785 1207.1265917661035 1900.0267452757157 1756.20739864039 0.6680400619849961 0.8661685222401787 0.9932487661782815 0.7285509371647968 0.8182709189621127 0.7032079671707602 0.8843438984641578 0.8058940516999795 0.6873485402126362 1.081892005891028 1.0 10.778247514114835 -11.003828816742343 1.2862499528554394 0.9999126657844474 0.7897641119141013 0.4764073541174547 0.09656164280741825 0.3686257635044354 1.086431778598182 0.0673058770588101 0.01534485619119179 9.912225721731377e-12 11.003828816742343 -0.21014855387034603 GIGFGDIFKEGS(ph)VK ddPTM_A549_PD325901_60min_R1 2 GIGFGDIFKEGSVK 14 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 GIGFGDIFKEGS(1)VK;GIGFGDIFKEGS(1)VK 132.64 2.1139000000000003e-09 26332000.0 11653.0 14027.5 13033.5 12447.6 16017.1 15784.7 14993.7 15048.8 15518.8 15256.099999999999 17110.7 True False 12836.003981514796 15209.646654515525 13918.031686802413 13216.459981449298 14892.114151995263 15656.1546366006 15564.293458367454 14748.63987844478 14866.598804080713 14292.827242377683 15006.19237366405 0.8553804763986669 1.013558021634358 0.9274858898402926 0.8807337432674965 0.9923979235486149 1.0433129368697978 1.0371913854498411 0.9828369189994342 0.990697602289284 0.9524619494723842 1.0 13.87327033782097 -6.880734070193195 7.773258522948976 1.0015297167746755 0.9268215063206353 0.4416436443223035 0.043336796025399346 0.1636430205074249 10.50608793992934 0.005598617752444698 0.010619222179318879 1.316030425182183e-07 6.880734070193195 -0.07470821045404019 GIGLAIVR ddPTM_A549_MK2206_60min_R1 1 GIGLAIVR 8 0 P16152;E9PQ63;A8MTM1;P16152-2 P16152 CBR1 Carbonyl reductase [NADPH] 1 0 71.067 0.017453 962510.0 951.11 824.8 934.58 757.11 1290.3 682.84 749.65 1055.9 1377.4 1311.2 1189.8 False True 1111.634115593056 866.7787969943602 1067.1174971741386 942.6019839879591 1100.4985792500747 755.0976755674926 885.8517013732269 1205.57705855813 1065.4210992558199 1014.999009332051 894.3398231905214 1.2429661374435346 0.9691828257207217 1.193190182862751 1.053964007356023 1.2305150131010494 0.8443073382036282 0.9905090642312969 1.348007801170345 1.1912933670503152 1.134914249609374 1.0 9.804679307623386 -5.212782856338871 21.407358231493813 1.0936375546179755 1.2429702693871292 0.08840235630745985 0.13592204398118884 11715.550516396113 5153647.223757218 0.01868534617124107 12.906382576242489 6.126566384271596e-06 5.212782856338871 0.14933271476915366 GIGLAIVR ddPTM_A549_PD325901_60min_R1 2 GIGLAIVR 8 0 P16152;E9PQ63;A8MTM1;P16152-2 P16152 CBR1 Carbonyl reductase [NADPH] 1 0 ; 103.41 0.005933399999999999 4164000.0 2035.16 1835.45 1717.5700000000002 2254.5 2367.6 2291.1 2226.4 2181.84 2492.2 2573.5 2241.7 False True 2241.7679449943935 1990.1298130123341 1834.134628787451 2393.755344659003 2201.3079437765896 2272.4420412117834 2311.1268703328274 2138.321489579631 2387.461500858954 2411.008770803741 1965.985111307117 1.1402771730574897 1.012281223070486 0.9329341398562255 1.2175856932443787 1.11969715900494 1.155879578203374 1.1755566494581626 1.0876590454736117 1.2143843242391656 1.22636166313627 1.0 10.941036680641332 -6.259705908301802 24.988771840671273 1.1190507962071514 1.0268758908852202 0.2542978833317471 0.08085867036916973 221.2077099657171 3188773.458347786 0.012951331579907702 0.032352906348712476 5.499131331161678e-07 6.259705908301802 -0.09217490532193118 GIGLDESELDS(ph)EAELMR ddPTM_A549_MK2206_60min_R1 2 GIGLDESELDSEAELMR 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 GIGLDES(0.066)ELDS(0.934)EAELMR;GIGLDES(0.002)ELDS(0.998)EAELMR 114.64 1.6564000000000002e-09 4659200.0 1347.02 1033.8600000000001 951.6400000000001 1020.26 1474.01 912.34 877.69 856.05 1645.54 1295.56 1597.28 True False 1574.3640445228818 1086.4790580269025 1086.5968617034364 1270.2237458012112 1257.1850816092406 1008.8832132377222 1037.1549119966216 977.3977090431736 1272.8278173874114 1002.8920961945021 1200.6312933146378 1.311280201748251 0.9049231550740361 0.9050212731867239 1.0579632172458593 1.0471033768730715 0.8402939510700675 0.8638413122927194 0.8140698268365361 1.0601321358811642 0.8353039786475762 1.0 10.229577460705954 -5.252843027909899 24.489858723697957 0.9829737457175879 1.3112804250163759 0.4817483023469118 0.10136916803856483 573.7115553309524 1634379.1750597851 0.013957922231801038 0.2217690857283124 5.586720855782754e-06 5.252843027909899 0.328306679298788 GIGLDESELDS(ph)EAELMR ddPTM_A549_PD325901_60min_R1 2 GIGLDESELDSEAELMR 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 GIGLDESELDS(1)EAELMR;GIGLDESELDS(1)EAELMR 256.37 2.6775999999999994e-86 17216000.0 3301.8 2852.9 3210.5 2940.6 3786.1000000000004 3577.7 3428.8999999999996 3421.8 2833.3 4006.7000000000003 4137.2 True False 3636.9963053433103 3093.323895253421 3428.3838363048417 3122.2341834128497 3520.177397335928 3548.5643973826523 3559.3886658660745 3353.5495146498306 2714.226254066158 3753.7162782122996 3628.3506278716172 1.0023828120152667 0.8525427149988418 0.9448876880776884 0.8605106020981069 0.9701866656147443 0.9780103306786071 0.980993578328455 0.924262801089049 0.7480606293163893 1.0345516911672403 1.0 11.825098162978708 -8.54304153684653 24.964699724995043 0.878667221319327 0.9385692329760245 0.0 0.08422944189708333 498.4494769661559 617155.9697632194 0.016481328348945216 0.018689037211718475 2.8639040469425776e-09 8.54304153684653 0.05990201165669751 GIGT(ph)PPNTT(ph)PIKNGS(ph)PEIK ddPTM_A549_PD325901_60min_R1 1 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 3 GIGT(0.921)PPNT(0.332)T(0.75)PIKNGS(0.996)PEIK 62.193000000000005 0.0019107 4280600.0 1969.6 2123.3 2325.9 2021.6 2818.5 2396.9 2394.8 2723.1 2383.0 2855.3 2385.4 True False 2169.552342057113 2302.2379427219985 2483.7495607729115 2146.469640613281 2620.5382832971445 2377.380441089663 2485.9354244848437 2668.7856342693744 2282.8507971057247 2675.015870711455 2092.0109222964684 1.0370654947037872 1.1004904028869777 1.1872545856722483 1.0260317562094903 1.2526408229362849 1.136409191630766 1.188299448148173 1.2757034897981134 1.091223173251775 1.2786815987437596 1.0 11.030674668513583 -9.531911019437548 1.3772360962498627 1.0222141153919926 1.1487608296449328 0.0 0.10829496459482453 0.303884410570921 1.1793416316309224 0.018609226881146853 0.014420005186059681 2.938251594903265e-10 9.531911019437548 0.12654671425294017 GIGT(ph)PPNTTPIK ddPTM_A549_MK2206_60min_R1 2 GIGTPPNTTPIK 12 0 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGT(0.932)PPNT(0.04)T(0.028)PIK;GIGT(0.999)PPNT(0.001)TPIK 109.15 0.00010922 10459200.0 5056.3 4774.4 5267.1 4938.1 5300.4 4423.4 4611.7 4520.5 6586.5 6617.1 6529.1 True False 5909.679825333734 5017.3965668887895 6014.05398078913 6147.934721679731 4520.718181397424 4891.4812519847155 5449.586195188296 5161.294718450637 5094.668266479202 5122.29251422446 4907.744276007088 1.2041539845963234 1.02234270669272 1.2254212205372137 1.2527007064601285 0.9211397186072323 0.9966862527654754 1.1104054915473403 1.0516633361854453 1.0380875571259787 1.0437162627372931 1.0 12.260844362239094 -6.7577374792577265 24.999998865869074 1.0208464525569652 1.1686871205156537 0.5250653741576428 0.06987143663413288 59.762651095804934 403587.7319769479 0.009828751178260478 0.01985299400227983 1.7468777801380404e-07 6.7577374792577265 0.14784066795868855 GIGT(ph)PPNTTPIK ddPTM_A549_PD325901_60min_R1 1 GIGTPPNTTPIK 12 0 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGT(0.999)PPNT(0.001)TPIK 131.06 7.2133e-08 7747700.0 4182.0 4501.0 4371.9 4587.2 6340.7 4874.5 4966.6 5109.0 5229.6 4694.6 5093.5 True False 4606.553561374315 4880.315066260872 4668.603424370391 4870.540925712921 5895.351106227492 4834.803688135325 5155.606680827802 5007.096987067036 5009.818098423876 4398.18215481455 4467.031790356782 1.0312336642239095 1.0925185436997038 1.0451242891193997 1.090330482139665 1.3197468437440043 1.0823302620259994 1.1541459570441122 1.1209002357843347 1.121509390024677 0.984587162399233 1.0 12.125100806513213 -10.55640407182329 0.7924917156098219 0.9976620429115136 1.120162430165348 0.3006294957170893 0.07279231630895747 0.7319834954937865 0.800455136477663 0.05391519464719212 0.013990944939110054 2.7771281981873053e-11 10.55640407182329 0.1225003872538345 GIGT(ph)PPNTTPIKNGS(ph)PEIK ddPTM_A549_MK2206_60min_R1 2 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 2 GIGT(0.493)PPNT(0.236)T(0.274)PIKNGS(0.997)PEIK;GIGT(0.682)PPNT(0.189)T(0.175)PIKNGS(0.954)PEIK 74.222 0.00026671 11500400.0 2708.4 2998.2 3440.0 2952.2 4255.200000000001 3478.1000000000004 3844.1 3610.6000000000004 5485.8 5848.7 6192.8 True False 3165.5117059774707 3150.7955736523895 3927.8437268923312 3675.489132529293 3629.265716829354 3846.1502334240768 4542.523211163635 4122.413606998755 4243.275059022489 4527.474607901439 4654.9568474149155 0.680030300975917 0.6768689113417137 0.8437980964471498 0.7895860806036128 0.7796561462959277 0.8262483111008856 0.9758464707758313 0.8855965247643697 0.9115605575117092 0.9726136581514666 1.0 12.184552078373317 -3.1934757589626117 0.1644839575883318 1.023008322259487 2.8219985964858588e-12 0.8238521104588573 0.04500546017510591 10.755348411196099 0.15168626532448445 0.06630125978655754 2.513739022333543 0.0006405075318133759 3.1934757589626117 -1.023008322256665 GIGT(ph)PPNTTPIKNGS(ph)PEIK ddPTM_A549_PD325901_60min_R1 1 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 2 GIGT(0.879)PPNT(0.067)T(0.055)PIKNGS(1)PEIK 115.88 3.3199000000000003e-14 12914000.0 5224.0 4200.7 4767.5 4489.8 6220.6 5702.5 4979.6 6004.2 5645.0 6078.5 4966.1 True False 5754.336634294462 4554.707731357933 5091.051219306443 4767.12474892437 5783.686515904987 5656.0607306578495 5169.101402941677 5884.441520796223 5407.760281016289 5694.7024726367 4355.301182701642 1.3212258791996982 1.0457847896830403 1.1689320682406648 1.094556851282388 1.327964765990604 1.2986612161571183 1.1868527998642855 1.3510986436869192 1.2416501303043743 1.3075335628348468 1.0 12.088556773811298 -10.625519859158917 0.9418327482571047 1.0022250384897786 1.2221875086702663 0.0 0.129056776355761 0.42035133445691975 0.674925524128838 0.06064023664094025 0.01711223940454733 2.3685368222693425e-11 10.625519859158917 0.21996247018048765 GIGTPPNT(ph)T(ph)PIKNGS(ph)PEIK ddPTM_A549_PD325901_60min_R1 1 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 3 GIGT(0.399)PPNT(0.692)T(0.913)PIKNGS(0.995)PEIK 46.403 0.016301 5935800.0 2159.2 2633.2 2281.3 2459.3 2689.6 2597.2 2330.4 3041.1 2540.8 2697.0 2694.2 True False 2378.4003944809724 2855.1090052162044 2436.122736571325 2611.205375524459 2500.6917746162853 2576.049264298916 2419.0846472438107 2980.4428748032033 2434.0190118700075 2526.710959727101 2362.8304799409534 1.0065895182376385 1.2083427183856004 1.0310188383181018 1.1051175264971664 1.0583458254181557 1.0902387141896404 1.0238079573547159 1.261386671665791 1.0301284973820184 1.0693576967020686 1.0 11.206300412272014 -8.97557058713605 24.99963324665261 1.0132918814423169 1.0988415575223682 0.11765030622281114 0.07521192499979835 172.63495850660942 176666.4101165633 0.01174994945126063 0.012167067148031945 1.0578629645008149e-09 8.97557058713605 0.08554967608005137 GIGTPPNT(ph)TPIKNGSPEIK ddPTM_A549_MK2206_60min_R1 4 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGT(0.062)PPNT(0.468)T(0.468)PIKNGS(0.002)PEIK;GIGT(0.006)PPNT(0.575)T(0.419)PIKNGSPEIK;GIGT(0.12)PPNT(0.43)T(0.43)PIKNGS(0.02)PEIK;GIGT(0.178)PPNT(0.442)T(0.352)PIKNGS(0.029)PEIK 71.148 0.00037172 48677800.0 6931.0 8764.5 9227.5 8698.9 13654.099999999999 10347.800000000001 10215.8 11136.400000000001 16468.4 15336.7 14499.1 True False 8100.783353319245 9210.57561379373 10536.098252877619 10830.130890508457 11645.599977476899 11442.797327686278 12071.878624542933 12715.018803794645 12738.333694630845 11872.12881819925 10898.573315197254 0.7432884212489814 0.8451175532260047 0.9667410539126079 0.9937200564964443 1.0685435277329347 1.049935344448263 1.1076567799667494 1.1666681900524072 1.168807450867737 1.089328710726242 1.0 13.411851669982513 -5.569789597140067 0.802642901997625 1.089605733211789 0.6263975248636428 0.8632206731878067 0.04603638756022403 0.6414397142229464 0.38819392265849056 0.010726660364025888 0.2388176329900583 2.6928390890273173e-06 5.569789597140067 -0.46320820834814624 GIGTPPNTT(ph)PIKNGS(ph)PEIK ddPTM_A549_PD325901_60min_R1 1 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 2 GIGT(0.26)PPNT(0.343)T(0.397)PIKNGS(0.999)PEIK 81.949 0.000105 12079000.0 3975.9 4189.2 4172.8 4902.3 4743.5 4681.7 4113.4 4885.4 3935.0 4748.4 6021.6 True False 4379.530441097117 4542.238585998679 4455.9913010848295 5205.103937068899 4410.332924186622 4643.573787412689 4269.937687938847 4787.956864477842 3769.6256343311074 4448.585213632985 5280.98137406742 0.8293023835689077 0.8601125935235481 0.843780915980171 0.9856319438331819 0.8351351030783464 0.8793012999847415 0.8085500374810326 0.906641498110445 0.7138115754094653 0.8423785085624489 1.0 12.366590337719241 GIGTPPNTT(ph)PIKNGSPEIK ddPTM_A549_PD325901_60min_R1 2 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGT(0.002)PPNT(0.171)T(0.827)PIKNGSPEIK;GIGTPPNT(0.151)T(0.849)PIKNGSPEIK 118.16 1.97e-14 38695000.0 6064.6 7198.0 7603.8 7130.700000000001 8729.5 9306.5 7994.4 8070.2 8464.8 7942.3 9096.0 True False 6680.273727477448 7804.600721383196 8119.839593363887 7571.147144005303 8116.37003514011 9230.71094956024 8298.631266703536 7909.233530050577 8109.053893134928 7440.821822558603 7977.249664294749 0.8374156518351913 0.9783573348989804 1.0178745726998308 0.9490924143809721 1.017439641066776 1.1571295042796315 1.0402872689126497 0.9914737362992907 1.016522515200962 0.9327552898165975 1.0 12.961675715368523 -4.422779731895163 1.1490726811863938 1.0177111486410546 2.3559318899979383e-11 0.4609745625344134 0.05465154181921051 5.563173804464237 1.4252388536598708 0.00727903121311856 10.855718683771478 3.777637388463914e-05 4.422779731895163 -1.0177111486174952 GIGTPPNTTPIKNGS(ph)PEIK ddPTM_A549_PD325901_60min_R1 2 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGTPPNTTPIKNGS(1)PEIK;GIGTPPNTTPIKNGS(1)PEIK 178.53 2.849e-35 38412000.0 11047.4 10068.4 11287.8 11200.7 13156.900000000001 13836.2 13884.7 12925.599999999999 12735.5 13194.7 13852.8 True False 12168.92391533396 10916.899403052868 12053.857987055537 11892.541800364648 12232.804732840936 13723.522574577493 14413.089856499373 12667.78876806296 12200.271223894244 12361.584390178406 12148.993420134377 1.0016405058847553 0.8985846831524681 0.9921692744584771 0.978891122013062 1.006898621952306 1.1296016138945033 1.18636082497277 1.0427027433456988 1.0042207450433618 1.017498648875034 1.0 13.568549166801267 -6.718436654660496 2.8474683630162505 1.0298081249785174 0.9611861643837115 0.26288584424917916 0.06257797176361131 0.392526519517414 6.488524747210892 0.010549306854816448 0.023087340581072993 1.9123322332842696e-07 6.718436654660496 -0.06862196059480585 GIHNFRAS(ph)GDYDNDCTNPITPLCTQPDQVIK ddPTM_A549_MK2206_60min_R1 2 GIHNFRASGDYDNDCTNPITPLCTQPDQVIK 31 1 Q8TAF3-4;Q8TAF3-3;Q8TAF3 Q8TAF3-4 WDR48 WD repeat-containing protein 48 1 GIHNFRAS(1)GDYDNDCTNPITPLCTQPDQVIK;GIHNFRAS(1)GDYDNDCTNPITPLCTQPDQVIK 102.05 1.525e-14 22373000.0 1789.31 2599.0 2336.69 1755.77 2854.4 2390.1000000000004 2117.6 1728.0500000000002 3138.1 2268.6800000000003 3002.0 True False 2091.301783570575 2731.27799877345 2668.067778544199 2185.9337288195115 2434.5215412008165 2643.018795580025 2502.3405093416177 1973.006379431174 2427.325360515961 1756.183612333311 2256.5205490149165 0.9267816260230967 1.210393585808819 1.182381334709734 0.968718733704322 1.0788829475821111 1.1712806234952455 1.1089376121276688 0.874357816192939 1.0756938870224821 0.7782706047591601 1.0 11.139884201181435 GIHNFRAS(ph)GDYDNDCTNPITPLCTQPDQVIK ddPTM_A549_PD325901_60min_R1 2 GIHNFRASGDYDNDCTNPITPLCTQPDQVIK 31 1 Q8TAF3-4;Q8TAF3-3;Q8TAF3 Q8TAF3-4 WDR48 WD repeat-containing protein 48 1 GIHNFRAS(1)GDYDNDCTNPITPLCTQPDQVIK;GIHNFRAS(0.999)GDYDNDCTNPITPLCTQPDQVIK 105.08 1.1281e-14 45481000.0 2745.3 2758.9 3931.0 3023.3 3643.7 3699.2 3700.8 3447.1 3201.5 3080.8999999999996 3518.2 True False 3024.0008350169555 2991.4021853603936 4197.781299023307 3210.042374587521 3387.779082082596 3669.074941665851 3841.635969155463 3378.344886302365 3066.952088516148 2886.371448210316 3085.483703707319 0.9800735072376207 0.9695083405451524 1.3604937514268907 1.0403692525520523 1.0979734159710706 1.1891409237577 1.2450676581242677 1.0949158092273061 0.9939939351587226 0.9354680579716683 1.0 11.591280959527172 -8.682159606358734 4.477807409031477 0.9970456698179977 1.1296126811137974 0.2577517128908341 0.10921379000569403 0.22716042831259667 8.503422237494375 0.01813267614071693 0.020415185908242168 2.0789325239771837e-09 8.682159606358734 0.13256701129579973 GIIDPTK ddPTM_A549_PD325901_60min_R1 1 GIIDPTK 7 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 100.19 0.031279 15644000.0 10858.0 8382.4 8385.5 7738.7 8567.2 7934.3 7934.8 8567.4 8490.2 8798.5 13888.0 False True 11960.296166762866 9088.814266035355 8954.590456107851 8216.701923137121 7965.469427235511 7869.685691408778 8236.763156089168 8396.516486004715 8133.386419465816 8242.961208438594 12179.864043285552 0.9819728795212843 0.7462163973041872 0.7351962570587386 0.6746135994569479 0.6539867275141442 0.6461226220129391 0.6762606813029153 0.6893768646484606 0.6677731697628878 0.6767695582762049 1.0 13.572210408920753 -10.732997571564068 0.9197953538874607 1.0051402847681623 0.7112569999027201 0.0 0.12950870877700127 0.34014621908586673 0.4970101437949059 0.06783056338773492 0.016312469411819706 1.8492789595260352e-11 10.732997571564068 -0.29388328486544224 GIINDDEDDEDLMMAS(ph)GRPR ddPTM_A549_MK2206_60min_R1 4 GIINDDEDDEDLMMASGRPR 20 1 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 GIINDDEDDEDLMMAS(1)GRPR;GIINDDEDDEDLMMAS(1)GRPR;GIINDDEDDEDLMMAS(1)GRPR;GIINDDEDDEDLMMAS(1)GRPR 116.65 9.7918e-15 7800000.0 3649.02 4241.22 3833.8 3426.14 5008.91 4173.630000000001 3901.46 4121.5199999999995 5300.3099999999995 5403.9 5585.17 True False 4264.885366026401 4457.079982284702 4377.490488418555 4265.544453805271 4272.105974262953 4615.2807563686265 4610.3047806837685 4705.758081625635 4099.7982478558215 4183.155236828452 4198.21814614978 1.0158798846452899 1.0616599297900529 1.0427020073821527 1.016036876911038 1.0175998067610983 1.099342767740961 1.0981575087783173 1.120894131225964 0.9765567450599916 0.9964120708364946 1.0 12.035561417988605 -8.793061910989588 24.998993156748814 0.9889295581303562 1.0584106172029264 0.43654367658376814 0.0344018047805184 134.1115852284822 106020.52176339805 0.006406125344504938 0.006820096070123317 1.6104160454365842e-09 8.793061910989588 0.06948105907257018 GIITAVEPST(ph)PTVLR ddPTM_A549_PD325901_60min_R1 1 GIITAVEPSTPTVLR 15 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;H7C0P3;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GIITAVEPS(0.004)T(0.996)PTVLR 211.83 2.0659e-45 10029000.0 4992.9 4937.5 5005.0 4563.3 5594.0 5173.4 5216.7 4950.0 4622.8 5029.2 5944.6 True False 5499.775532421288 5353.600453157755 5344.669397509963 4845.164676993761 5201.09673825234 5131.269545635305 5415.2243731877725 4851.26836680012 4428.519792220038 4711.655453711356 5213.451885924203 1.054920166669252 1.026882106193775 1.025169027058643 0.9293582798903772 0.9976301406549429 0.9842364824521 1.0387022824183598 0.9305290377567418 0.849441001685773 0.9037496761852455 1.0 12.348023198370669 -8.283681584716637 20.123841955287457 0.9270380608350928 1.0051527170013925 0.45844924695328193 0.04534048154703416 68.5625716044119 62032.15565165576 0.010093033909556678 0.01221436149959325 5.203773861025748e-09 8.283681584716637 0.07811465616629976 GIITDS(ph)FGR ddPTM_A549_MK2206_60min_R1 2 GIITDSFGR 9 0 Q9BSQ5-3;Q9BSQ5;C9JUH3;A0A0A0MT72;Q9BSQ5-4;Q9BSQ5-2 Q9BSQ5-3 CCM2 Cerebral cavernous malformations 2 protein 1 GIITDS(1)FGR;GIIT(0.102)DS(0.898)FGR 133.76 5.547000000000001e-10 50271000.0 2176.0 2863.5 2422.2 2414.9 3407.0 2453.9 2397.3 2927.2 3556.8 3463.5 3589.7 True False 2543.2556019077583 3009.239919002607 2765.7043823484332 3006.5506084089807 2905.8348132256097 2713.57006923301 2832.8583788461774 3342.139564174029 2751.190479042471 2681.0929444947824 2698.278419320066 0.942547508699502 1.1152444082330466 1.0249885121363265 1.1142477317691315 1.0769217855427409 1.0056671875679892 1.049876231660343 1.2386192396766116 1.019609562654301 0.9936309482734498 1.0 11.397823503759405 -8.972358861274822 24.999761993334154 1.0086511587193683 1.0734222447303776 0.1484277093684998 0.07111945293204343 247.03652580123907 223431.7635887018 0.01178768549202654 0.012334013488439585 1.0657151476873885e-09 8.972358861274822 0.06477108601100934 GIITDS(ph)FGR ddPTM_A549_PD325901_60min_R1 4 GIITDSFGR 9 0 Q9BSQ5-3;Q9BSQ5;C9JUH3;A0A0A0MT72;Q9BSQ5-4;Q9BSQ5-2 Q9BSQ5-3 CCM2 Cerebral cavernous malformations 2 protein 1 GIIT(0.002)DS(0.998)FGR;GIITDS(1)FGR;GIIT(0.002)DS(0.998)FGR;GIITDS(1)FGR 166.19 1.0804e-26 126742000.0 5000.5 5386.0 5642.7 5461.6 6333.9 6277.5 6894.4 7053.0 5662.799999999999 6242.4 5917.5 True False 5508.147078826466 5839.897122168647 6025.647554311579 5798.95062780644 5889.028714768768 6226.378121298493 7156.770164760438 6912.32238202854 5424.812208917455 5848.25379866535 5189.685014123152 1.061364430372297 1.1252893203105805 1.1610815565710537 1.1173993435102978 1.1347564830509809 1.1997603138445005 1.379037484025347 1.3319348598647938 1.0453066407988982 1.126899567651982 1.0 12.341431262098252 -8.935650527633628 11.57245668599732 1.0199581458387512 1.1884239344703675 0.25884771814047736 0.09424124876736632 0.4630915461567612 81.78616540325163 0.016878868285344628 0.017946503015717024 1.15971018781479e-09 8.935650527633628 0.16846578863161632 GIKS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 GIKSPIR 7 1 Q8IX21;Q8IX21-2 Q8IX21 FAM178A Protein FAM178A 1 GIKS(1)PIR;GIKS(1)PIR 68.735 0.0062867 51154000.0 9438.2 10098.8 9648.1 9170.0 12324.6 10104.7 8741.3 9325.6 12694.400000000001 12028.599999999999 12450.8 True False 11031.137418164439 10612.785784537633 11016.345657392425 11416.650411656949 10511.6676662989 11173.972647042992 10329.481060780075 10647.532358452216 9819.13866879126 9311.330905774481 9358.92273540137 1.1786759790673018 1.133975146989232 1.1770954808422163 1.2198680055848683 1.1231706857176114 1.193937909624572 1.1037040643264893 1.137687815091849 1.0491740285074758 0.9949148175519319 1.0 13.19212676172106 -8.720068848093888 0.791170003180501 1.0102981794186157 1.172125428164485 0.8216318471281149 0.03066314183989548 0.14404024079492464 0.18497672710869636 0.0071680006510026475 0.007528727092684473 1.9051586718955362e-09 8.720068848093888 0.1618272487458694 GIKS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 GIKSPIR 7 1 Q8IX21;Q8IX21-2 Q8IX21 FAM178A Protein FAM178A 1 GIKS(1)PIR;GIKS(1)PIR 53.493 0.012481 82887000.0 6935.5 7616.1 6844.3 6667.5 7791.9 6087.1 6783.4 7370.5 6299.799999999999 6886.4 7891.200000000001 True False 7639.586854354755 8257.935475705273 7308.795356119365 7079.336332008834 7244.623824595707 6037.528675771571 7041.545999018912 7223.489595454607 6035.04131414463 6451.591528759623 6920.6324264382965 1.1038856543182236 1.1932342258430304 1.0560877829890523 1.022931994620066 1.0468152877069001 0.8723955129746409 1.0174714628851982 1.0437614874414267 0.8720361004999313 0.9322257174233329 1.0 12.756688165991752 -6.351926096890552 0.9081132158436281 0.9486086701188754 1.1598002122282947 0.5535124531834 0.0608137894180075 0.4238294058619984 0.5726571808401305 0.01089204524500965 0.060620538612360504 4.447069360087377e-07 6.351926096890552 0.21119154210941926 GILAADES(ph)TGSIAK ddPTM_A549_MK2206_60min_R1 2 GILAADESTGSIAK 14 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 GILAADES(0.986)T(0.014)GSIAK;GILAADES(0.983)T(0.017)GSIAK 222.55 7.095699999999999e-47 34331000.0 9656.1 9774.4 9264.900000000001 10169.0 13927.5 10429.599999999999 10004.3 10868.3 14722.900000000001 14143.6 13909.400000000001 True False 11285.813611020916 10271.875210162067 10578.802135257209 12660.405456503764 11878.783199647689 11533.253349391824 11821.951812243278 12408.91480777283 11388.18665764012 10948.55093684319 10455.312100089302 1.0794334499995002 0.9824551492895492 1.0118112241878319 1.210906507171185 1.136148121254671 1.1030998633979863 1.1307124741060866 1.1868526438026503 1.089224936436173 1.0471759075226148 1.0 13.35194850781177 -10.207913235382344 0.9610346942168113 1.0074418657277893 1.1029567461397989 0.17444456074016546 0.06463770675292384 0.5549616596750292 1.0134778512925413 0.02951097981890374 0.012939865159408398 6.195648411833282e-11 10.207913235382344 0.09551488041200962 GILAADES(ph)TGSIAK ddPTM_A549_PD325901_60min_R1 3 GILAADESTGSIAK 14 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 GILAADES(0.948)T(0.052)GSIAK;GILAADES(0.474)T(0.263)GS(0.263)IAK;GILAADES(0.991)T(0.009)GSIAK 281.51 2.6453999999999995e-99 99052000.0 14271.2 15663.3 15773.0 15370.2 18063.0 16254.7 17729.4 15799.400000000001 18317.9 16788.4 18126.300000000003 True False 15720.001718097834 16983.30126135614 16843.45063075418 16319.582345743103 16794.317193967105 16122.327112428606 18404.10201889994 15484.268572610466 17548.062365213173 15728.37755887374 15896.880012082882 0.9888733956694266 1.0683417908701263 1.0595444274569494 1.0265902701246368 1.056453667713545 1.0141818457568004 1.1577178669595147 0.9740445018671087 1.103868328368539 0.9894002814966795 1.0 13.956456023500714 -5.250285961429089 23.299027167757668 1.0504497748618478 0.9888733002780221 0.08193737828514336 0.05116239288929354 1093.716773116783 2284610.5794846104 0.006689783964505026 0.13056669392267478 5.619711731270112e-06 5.250285961429089 -0.06157647458382565 GILAADES(ph)TGSIAKR ddPTM_A549_MK2206_60min_R1 2 GILAADESTGSIAKR 15 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 GILAADES(0.936)T(0.032)GS(0.032)IAKR;GILAADES(0.977)T(0.022)GS(0.001)IAKR 105.39 2.164e-06 16864400.0 2829.5 3740.6 3905.5 3361.7 3912.2 2865.3999999999996 2939.8999999999996 2227.0 4756.9 5148.9 4951.0 True False 3307.050425366729 3930.9805626056072 4459.358626563374 4185.3166509124485 3336.720562460004 3168.6147261014185 3474.041775318012 2542.6840699014638 3679.4697452083697 3985.759913933644 3721.530059351381 0.8886265521507326 1.0562807500984503 1.1982594673279592 1.1246225568958321 0.8965991162897002 0.8514279545154798 0.9334982439785792 0.6832362037523415 0.9886981124773335 1.0710003279211227 1.0 11.861680173522906 -6.760461435988522 24.995768946005285 0.9492117874118338 1.0755648745656683 0.24169706634572563 0.11873163773520219 33.95039175128771 867714.2851697255 0.0175477377355505 0.03494857214163764 1.735955403517282e-07 6.760461435988522 0.12635308715383453 GILAADES(ph)TGSIAKR ddPTM_A549_PD325901_60min_R1 4 GILAADESTGSIAKR 15 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 GILAADES(0.773)T(0.117)GS(0.111)IAKR;GILAADES(0.846)T(0.146)GS(0.008)IAKR;GILAADES(0.929)T(0.067)GS(0.004)IAKR;GILAADES(0.889)T(0.055)GS(0.055)IAKR 100.77 3.0959e-06 28200100.0 8972.6 9323.0 8996.0 9793.2 10872.4 11874.0 10584.900000000001 11834.599999999999 11899.800000000001 11678.5 11152.4 True False 9883.491746720987 10108.68192907135 9606.522657342577 10398.103722029084 10108.760131743784 11777.302080812147 10987.714161779537 11598.549618935896 11399.692788669206 10941.117516934715 9780.72550088838 1.010507016664896 1.0335308897231787 0.982189169552915 1.06312192496197 1.0335388853133245 1.204133791480235 1.12340481907825 1.1858577993915076 1.1655262983951218 1.1186406893784042 1.0 13.255725768010702 -7.033915616705921 24.812328435456614 1.1013319608756733 1.023776694898942 0.41753342038849217 0.057554333415295846 741.7967594914294 542690.4130873068 0.011484567980263845 0.019899872994932098 9.248778599858284e-08 7.033915616705921 -0.07755526597673135 GILAADESTGS(ph)IAK ddPTM_A549_MK2206_60min_R1 2 GILAADESTGSIAK 14 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 GILAADES(0.001)T(0.029)GS(0.97)IAK;GILAADES(0.008)T(0.008)GS(0.983)IAK 248.99 1.8335999999999996e-69 30868000.0 10700.5 11984.599999999999 11106.5 9684.4 15864.7 13632.400000000001 11776.900000000001 13516.9 20400.7 16166.1 16539.5 True False 12506.482797892459 12594.564949634589 12681.568707188871 12057.07843474924 13531.023645841005 15074.971519545263 13916.610287337233 15432.961968770142 15779.974023223609 12514.166782155935 12432.285683022043 1.0059680992507871 1.013053051606927 1.020051262537126 0.9698199303137638 1.088377792373243 1.2125663698455837 1.1193927361516665 1.2413615936967992 1.2692737623278143 1.0065861661500999 1.0 13.601803940655431 -6.955802983538527 5.114602917040826 1.1446354671293293 1.0054033220116432 0.3925741658959755 0.08077051366098453 0.19975614364949232 12.10309902050408 0.015133352262448094 0.028774835888694214 1.1071259146089497e-07 6.955802983538527 -0.1392321451176861 GILAADESTGS(ph)IAK ddPTM_A549_PD325901_60min_R1 1 GILAADESTGSIAK 14 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 GILAADES(0.005)T(0.246)GS(0.749)IAK 242.43 1.2925999999999997e-57 24667000.0 4780.6 5331.7 6120.0 5668.2 5767.6 6544.2 6748.1 6841.7 6974.1 7234.7 6393.7 True False 5265.922992708285 5781.021070602774 6535.340002549647 6018.311840583798 5362.503673139825 6490.906204922594 7004.902638202011 6705.236926290181 6681.002830086042 6777.899807318375 5607.315433003661 0.9391165978846132 1.030978395931984 1.1655024727312107 1.073296466462558 0.9563406477147838 1.1575782176829708 1.249243550126037 1.1958016284984343 1.1914797570978168 1.208760214812397 1.0 12.453094513879558 -7.286782882895961 24.91749111667696 1.1187406451187585 1.042526705738944 0.28581263608894747 0.08857276369614973 1322.7680924725737 1300530.0705327112 0.01601377700363869 0.02560560790390491 5.16674606166011e-08 7.286782882895961 -0.07621393937981447 GILAADESTGS(ph)IAKR ddPTM_A549_MK2206_60min_R1 2 GILAADESTGSIAKR 15 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 GILAADESTGS(1)IAKR;GILAADES(0.001)T(0.024)GS(0.974)IAKR 170.11 1.4522999999999998e-27 85131000.0 4538.4 5138.9 5452.0 4847.2 6932.5 4489.5 4418.700000000001 4479.9 7465.8 8019.5 6785.2 True False 5304.37096677306 5400.448059983412 6225.175581109596 6034.764217599076 5912.738433427223 4964.575910111091 5221.520593420765 5114.9395441183515 5774.808220432769 6207.889380215357 5100.247578006666 1.0400222510073074 1.0588599822626794 1.2205634110692694 1.1832296619525375 1.159304199059706 0.9733990035149235 1.0237778683405594 1.0028806378292379 1.1322603720915334 1.217174124445463 1.0 12.31635156525468 -7.235742188783445 24.661281432855468 1.0501566142351761 1.1360328707643703 0.16980665449259025 0.08037545635487335 741.7261839232807 711825.6173407511 0.010933025897251761 0.018932964781398318 5.8110928036809154e-08 7.235742188783445 0.08587625652919417 GILAADESTGS(ph)IAKR ddPTM_A549_PD325901_60min_R1 1 GILAADESTGSIAKR 15 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 GILAADES(0.002)T(0.046)GS(0.952)IAKR 131.45 1.0097000000000001e-09 77052000.0 2277.7 2745.7 2316.6 3245.0 3509.3 2992.9 2972.1 3104.6 2727.4 2897.1 3247.0 True False 2508.930427245881 2977.0897750349877 2473.818406847468 3445.4362800702897 3262.8188744277663 2968.5268146928333 3085.204891895525 3042.676317488416 2612.7768627889864 2714.1766115778214 2847.6395844288754 0.8810561705086966 1.0454587691904398 0.8687259512666238 1.2099270915147462 1.1457976958422424 1.0424517312250396 1.0834253424364784 1.0684906664895435 0.917523719320332 0.9531320699498489 1.0 11.475550845762363 -8.752081158174517 24.962144487431996 0.961052866573014 1.0477262327102888 0.13697640422365398 0.0958028787655901 283.6683457490417 756656.666321794 0.01646380522214501 0.018545228895016565 1.769778202584719e-09 8.752081158174517 0.08667336613727472 GILDEDNEKEKRDS(ph)LGNEESVDK ddPTM_A549_PD325901_60min_R1 1 GILDEDNEKEKRDSLGNEESVDK 23 3 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 GILDEDNEKEKRDS(1)LGNEESVDK 107.01 4.468600000000001e-11 7285200.0 1685.5 1383.2 1679.2 1598.8 2204.9 2127.8 1646.7 1804.7 1846.2 1867.6 2238.8 True False 1856.6107192004804 1499.7671183408227 1793.1606098498967 1697.5542448617496 2050.03543049206 2110.4719022698423 1709.3660696088145 1768.703842740238 1768.6106343334418 1749.6794172733903 1963.4417929225028 0.9455898951997916 0.7638459789065 0.9132741374425215 0.8645808859630157 1.0441029817546392 1.0748838645878527 0.8705967631790567 0.9008180681066154 0.9007705961585636 0.8911287432000029 1.0 10.939169113984565 -2.000000000000003 0.23033982780563833 0.9646045246398676 0.35824280492871885 0.04909506783240858 0.08197449262502675 73.87876007560995 0.8733808249061167 0.04716771404088625 17.152622953387198 0.009999999999999929 2.000000000000003 -0.6063617197111487 GILFVGS(ph)GVSGGEEGAR ddPTM_A549_MK2206_60min_R1 1 GILFVGSGVSGGEEGAR 17 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 1 GILFVGS(0.669)GVS(0.331)GGEEGAR 69.729 0.0014244000000000001 2319500.0 792.77 727.01 1049.7 666.21 1211.7 1343.7 1118.1 1224.0 1327.1 1619.9 1647.2 True False 926.570194634382 764.0117036892216 1198.563244220606 829.4314799073039 1033.4605351292837 1485.8894421241282 1321.2442970791767 1397.5057483427893 1026.5139689432244 1253.963464930589 1238.1547795927281 0.7483476298005027 0.6170567010535883 0.9680237592063045 0.6698932101042591 0.8346779838537025 1.2000837590053874 1.067107536841056 1.128700362326653 0.829067565592147 1.0127679395164642 1.0 10.273975959305638 -7.009120020744963 24.83118997721547 0.9668292175211675 0.75622594878869 0.48740086045978004 0.1295434049380943 368.56530384629013 1003501.5702213681 0.020678123684836156 0.03764926445793438 9.792193329368692e-08 7.009120020744963 -0.21060326873247748 GILFVGSGVS(ph)GGEEGAR ddPTM_A549_PD325901_60min_R1 1 GILFVGSGVSGGEEGAR 17 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 1 GILFVGSGVS(1)GGEEGAR 148.7 1.5250999999999999e-16 5583300.0 3402.9 2921.7 2833.1 2910.6 2957.0 3344.0 3306.6 3270.3 3573.0 3113.7 3228.1 True False 3748.3599029174247 3167.92191270704 3025.371202814278 3090.3811515477937 2749.3105210962053 3316.767572699668 3432.434472440946 3205.0713009992787 3422.8392354421962 2917.1004506126324 2831.0641646119025 1.32401093192152 1.1189862640013022 1.0686339224067047 1.0915970009360207 0.9711226454922457 1.1715621334758226 1.212418466294805 1.132108322044565 1.2090291976520489 1.0303900869066047 1.0 11.467128732216718 -10.976418989370268 1.2522238082145136 1.000169915737569 1.144296452071729 0.2490182842075116 0.08623467172125795 0.5080635857561745 1.419772113051882 0.06212422436115998 0.014386314992735261 1.0557984270137154e-11 10.976418989370268 0.14412653633415995 GILFVGSGVSGGEEGAR ddPTM_A549_MK2206_60min_R1 2 GILFVGSGVSGGEEGAR 17 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 234.41 1.0258e-64 13578900.0 5165.3 6361.2 6417.1 6129.5 6482.1 6349.299999999999 5885.0 5695.3 8043.0 7529.3 8476.3 False True 6037.076360539589 6684.957909117997 7327.141273209535 7631.22777516371 5528.591676785947 7021.1787116757605 6954.228323326135 6502.626216124747 6221.273342031764 5828.425900674048 6371.400776021025 0.9475273291958533 1.0492132176454907 1.1500047683054988 1.1977315575381924 0.8677199678904178 1.101983528975323 1.0914755746489218 1.020596010942773 0.9764372954603215 0.9147793563088228 1.0 12.637394873855168 -8.507073618175593 4.993111445354109 0.9891310027447416 1.0608399525946495 0.16354387661502712 0.08812146948644972 0.2941110030321881 20.61622561536132 0.01399142875990623 0.016483873590648682 3.1111889081965595e-09 8.507073618175593 0.07170894984990783 GILFVGSGVSGGEEGAR ddPTM_A549_PD325901_60min_R1 2 GILFVGSGVSGGEEGAR 17 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 252.42 1.3069e-85 25959000.0 8942.8 8605.5 9295.3 9684.5 11577.0 10045.3 10360.2 11419.099999999999 10587.3 9811.900000000001 10775.9 False True 9850.666472658591 9330.715686004878 9926.134955179694 10282.689569904693 10763.87145848183 9963.494407308604 10754.46308031897 11191.337092389344 10142.35259932751 9192.374959490668 9450.532614058246 1.0423398209329622 0.987321674560952 1.050325453658978 1.0880539742922597 1.13896982297801 1.0542786120315903 1.137974283515095 1.1842017322644383 1.0732043381597498 0.9726832692811882 1.0 13.206179923837846 -3.689112943409956 14.336504032811218 1.0589574568946716 0.514397670045541 0.0 0.06452962565241635 0.0 0.0 0.008852239867548075 0.0 0.00020459125038207736 3.689112943409956 -0.5445597868491305 GILHLS(ph)PDVYQEMEASR ddPTM_A549_MK2206_60min_R1 5 GILHLSPDVYQEMEASR 17 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(0.999)PDVYQEMEAS(0.001)R;GILHLS(1)PDVYQEMEASR 170.38 2.5648e-30 23485700.0 3210.9 3620.1900000000005 3534.05 3216.89 5106.41 4121.42 3178.46 3803.87 5885.65 5214.259999999999 5564.7300000000005 True False 3752.821421031997 3804.4422079183005 4035.231431111582 4005.028194411679 4355.2638534204225 4557.5459288228185 3755.9450393473567 4343.080221363305 4552.559672451732 4036.355044539152 4182.853962265081 0.8971915957113132 0.9095326402115497 0.9647077013720177 0.9574869767250717 1.041218243025147 1.089578065583441 0.8979383629528997 1.0383054872447566 1.0883859951893826 0.964976325004998 1.0 12.030271914106185 -6.154902699098428 0.9424696858829354 1.0358241646801365 0.8856381718904515 0.3426950612851146 0.054872318712816955 0.5412008623737137 0.7338683755422174 0.00865838351901693 0.060073572694671076 6.999988086921188e-07 6.154902699098428 -0.15018599278968503 GILHLS(ph)PDVYQEMEASR ddPTM_A549_PD325901_60min_R1 5 GILHLSPDVYQEMEASR 17 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(0.999)PDVYQEMEAS(0.001)R 156.15 1.2762e-22 47801970.0 5353.42 6034.259999999999 5209.049999999999 5654.36 6027.9 6124.11 5735.65 6086.35 5668.96 7032.209999999999 7644.540000000001 True False 5896.895257420492 6542.788267437314 5562.5674575622925 6003.616975216721 5604.5210991260765 6074.237278602202 5953.92329941811 5964.952974600789 5430.713325539435 6588.195060475533 6704.310042731727 0.8795678033735077 0.9759077706333821 0.8297002110743342 0.8954861778394868 0.8359579230978507 0.9060197454900526 0.888073979495157 0.8897191413555688 0.8100331415052884 0.9826805470635899 1.0 12.710873153086087 -11.01149073266477 1.2990162485820393 0.9999052655432065 0.8732849572131905 0.502772001451418 0.04276203462132292 0.28644017488276785 0.8617356799722102 0.031749801077005466 0.00722371714447136 9.738885667474777e-12 11.01149073266477 -0.12662030833001592 GILLEDGSES(ph)PAKR ddPTM_A549_MK2206_60min_R1 2 GILLEDGSESPAKR 14 1 Q08999;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 GILLEDGSES(1)PAKR;GILLEDGS(0.003)ES(0.997)PAKR 131.56 3.6067e-09 64065000.0 3793.8 4896.2 4224.8 3865.3 5649.3 4752.9 4688.2 4221.7 6375.9 6153.1 6283.6 True False 4434.100690495246 5145.395666638927 4823.940167841491 4812.298673519909 4818.295453582459 5255.84872328032 5539.985254956258 4820.138903414013 4931.768830220107 4763.110436486456 4723.208701462397 0.9387899139672493 1.0893856257179177 1.0213269141268109 1.0188621713941899 1.0201318125304566 1.1127707995738167 1.1729283216388409 1.0205221086084137 1.0441564499771385 1.0084480143788066 1.0 12.205551569020486 -3.8543853307934643 14.627961573479054 1.0358073083316748 0.553366082313326 0.0 0.06036641346499511 0.0 0.0 0.00786314377603972 0.0 0.00013983460797383545 3.8543853307934643 -0.4824412260183488 GILLEDGSES(ph)PAKR ddPTM_A549_PD325901_60min_R1 2 GILLEDGSESPAKR 14 1 Q08999;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 GILLEDGSES(1)PAKR;GILLEDGS(0.002)ES(0.998)PAKR 180.74 9.4584e-25 124109000.0 9108.2 8565.099999999999 9965.1 9652.400000000001 10682.5 9568.5 10290.2 11151.3 10509.1 10630.2 10083.7 True False 10032.857758897544 9286.91103622106 10641.391611014289 10248.606825809085 9932.19805262435 9490.577308426062 10681.799192013495 10928.87857347438 10067.439073379677 9959.007357838722 8843.468825840915 1.134493484002702 1.0501434696173058 1.2033051532810046 1.158889913860759 1.1231111058595165 1.0731736036309953 1.2078743536473964 1.2358135465508542 1.1384038629685989 1.1261426431151276 1.0 13.110396658375826 -10.395155659774328 0.8875537055090323 1.0049352178687856 1.1463470639456614 0.10808775240103208 0.06372768395769174 0.36409049445089603 0.5428474018530679 0.03031041319083613 0.010461764312854525 4.025727184003672e-11 10.395155659774328 0.14141184607687585 GILRPLS(ph)TR ddPTM_A549_PD325901_60min_R1 1 GILRPLSTR 9 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 GILRPLS(0.981)T(0.019)R 69.01 0.001172 1366700.0 236.12 370.21 256.74 369.01 393.74 498.59 401.01 319.11 372.35 422.16 458.38 True False 260.0907285776432 401.4088959521079 274.16392030303837 391.8029096174848 366.0850607292594 494.5296483469874 416.2706549910918 312.745100713048 356.70142438200446 395.5047455537239 402.0021659102271 0.6469883762659259 0.9985242120355847 0.6819961272653021 0.974628852385288 0.9106544485907359 1.2301666266579843 1.0354935626989907 0.7779686957778443 0.887312195381706 0.9838373498764826 1.0 8.651059464162824 -6.287693052529881 24.247308320372206 0.9591542838074727 0.7981050199686542 0.29485600538305745 0.1343738280746424 554.4153353742846 512044.8986519472 0.01862895013847018 0.04330371059434468 5.155929228218356e-07 6.287693052529881 -0.16104926383881846 GILRT(ph)PDTIR ddPTM_A549_MK2206_60min_R1 2 GILRTPDTIR 10 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 GILRT(1)PDTIR;GILRT(1)PDTIR 129.34 5.3562e-07 121895000.0 2416.3 2364.6 2272.5 2037.79 2991.0 2129.2799999999997 2303.53 2403.3 3132.4 3153.2 3427.2 True False 2824.1123671368205 2484.9480399768 2594.774671326403 2537.048641479869 2551.027862153741 2354.5989962983285 2722.051583624716 2743.9751347975694 2422.9164014149324 2440.88993000749 2576.131654091911 1.0962608850564832 0.9646044432666026 1.0072368262720113 0.9848287984234179 0.9902552371893356 0.9140056924335752 1.056643040467682 1.0651533008567542 0.9405250688824026 0.9475020137772835 1.0 11.330990609423639 -5.25567165329572 24.27085961691643 0.9827461895302444 1.0962609593092405 0.33345326991905944 0.04399280942789323 366.9313795654873 1543993.400258918 0.006065603213088014 0.07405868140269653 5.5504519418899204e-06 5.25567165329572 0.1135147697789961 GILRT(ph)PDTIR ddPTM_A549_PD325901_60min_R1 4 GILRTPDTIR 10 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 GILRT(1)PDTIR;GILRT(1)PDTIR;GILRT(1)PDTIR;GILRT(0.974)PDT(0.026)IR 113.77 3.9881999999999995e-05 183474000.0 13126.49 12153.25 13842.699999999999 14449.429999999998 15151.14 15643.800000000001 15231.9 15681.999999999998 16367.900000000001 15580.8 15916.100000000002 True False 14459.081601588796 13177.44702933458 14782.148864917308 15341.9384740635 14086.976194995448 15516.402079485364 15811.558289715507 15369.210207708995 15680.014083905498 14597.02562896403 13958.520600470722 1.0358606055358899 0.9440432411505126 1.059005412394406 1.0991092045632778 1.009202665397105 1.1116079220431216 1.1327531578942753 1.1010629741944644 1.1233292218214532 1.0457430301368595 1.0 13.768858424573812 -5.886705764077126 7.3156076791207285 1.0705570151996844 0.9905664997066492 0.33485144234975484 0.046394005677223855 0.2326229792660051 13.967127683876 0.007802878660526985 0.024571539650222185 1.2980584119324602e-06 5.886705764077126 -0.07999051549303515 GILRT(ph)PDTIRR ddPTM_A549_PD325901_60min_R1 1 GILRTPDTIRR 11 2 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 GILRT(0.835)PDT(0.165)IRR 50.46 0.049475 30258000.0 2164.1 2031.0 2730.0 3421.7 3724.4 4244.8 3078.0 4146.0 3702.0 3033.5 3122.8 True False 2383.797838873782 2202.1594977951195 2915.274216823614 3633.0506377554752 3462.8109924824853 4210.231756158957 3195.1349743462265 4063.30477752592 3546.4178140517806 2841.96429229965 2738.715397060207 0.8704072870925541 0.8040848275651287 1.0644677500820015 1.3265528216824813 1.2643924214248539 1.5373016709506602 1.166654621278264 1.4836535340209334 1.294920172376647 1.0376997534502024 1.0 11.419283635925048 -5.935179398041741 3.801240813393978 1.21585292341951 0.8397612943621233 0.5023817451375724 0.15965789178203005 0.17102201393884608 4.967998632019365 0.025796183252636332 0.08777908095017264 1.160968942588273e-06 5.935179398041741 -0.3760916290573866 GILRTPDT(ph)IR ddPTM_A549_PD325901_60min_R1 1 GILRTPDTIR 10 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 GILRT(0.294)PDT(0.706)IR 81.625 0.00043751 12889000.0 609.61 783.64 713.72 600.48 717.3 548.26 796.64 801.45 796.26 776.92 658.6 True False 671.4971584288372 849.680092984819 762.157331147015 637.5702858109732 666.9193225506623 543.7951523350238 826.9565711381348 785.4644510246377 762.795961268739 727.8651386100037 577.5963752093803 1.16257162830258 1.4710620243709245 1.3195327461512043 1.103833599336305 1.1546459624316412 0.941479510043491 1.4317205000435826 1.3598846612219555 1.320638414658027 1.260162234131318 1.0 9.17391787818426 -10.814799543551224 1.074893856711971 1.0007865227963142 1.2557790525292496 0.0 0.16479557938294803 0.5464776415623562 1.126469475873504 0.10363538456963041 0.02606231262074121 1.531794325827014e-11 10.814799543551224 0.2549925297329354 GILRTPDT(ph)IRR ddPTM_A549_MK2206_60min_R1 1 GILRTPDTIRR 11 2 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 GILRT(0.069)PDT(0.931)IRR 50.292 0.050066 16333000.0 1397.4 1362.4 1296.7 1303.5 2016.1 1471.5 1194.3 1212.7 2116.9 1766.8 2222.3 True False 1633.24695685014 1431.7403407191043 1480.5915583317703 1622.8575585163387 1719.5343607115196 1627.2131532973538 1411.2888507303999 1384.6039387379915 1637.425529994659 1367.6786529041092 1670.4415776401884 0.977733659597606 0.8571029121184266 0.8863474054707039 0.9715141075504892 1.029389105089616 0.9741215586815656 0.844859748237415 0.8288849830318543 0.9802351377698759 0.8187527604743959 1.0 10.706013811110683 -8.97077946362122 24.879289857574566 0.9912802751158052 0.9213223440400583 0.0 0.07962867488352914 207.8651743351262 176984.48837648774 0.011215982362697179 0.011784001582079727 1.069597887188555e-09 8.97077946362122 -0.06995793107574688 GILSLIQS(ph)STRR ddPTM_A549_PD325901_60min_R1 1 GILSLIQSSTRR 12 1 A0A0A0MS29;Q9GZY8-2;H7C433;E9PQX8;Q9GZY8 A0A0A0MS29;Q9GZY8 MFF Mitochondrial fission factor 1 GILSLIQS(0.765)S(0.118)T(0.118)RR 69.345 0.0015387999999999999 3731300.0 828.53 576.25 644.66 894.96 856.77 780.51 718.97 859.51 544.15 1209.2 999.27 True False 912.6417556684506 624.8126098495509 688.4105042554993 950.2396465983691 796.5934308960412 774.1537853372661 746.3307967854805 842.3663987774495 521.2812678325975 1132.8509056366377 876.3661248944387 1.0413932370770054 0.712958422400012 0.7855284277885806 1.0842952729520765 0.908973325494517 0.88336799352042 0.8516198602215239 0.9612037421904177 0.5948213343999206 1.2926685245542706 1.0 9.77538990916524 GILSLPHQAS(ph)PVSR ddPTM_A549_MK2206_60min_R1 4 GILSLPHQASPVSR 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 GILSLPHQAS(1)PVSR;GILSLPHQAS(0.993)PVS(0.007)R;GILSLPHQAS(0.999)PVSR;GILS(0.033)LPHQAS(0.859)PVS(0.108)R 151.44 2.305e-14 63813000.0 1812.47 1932.48 1939.92 1498.81 2661.6000000000004 1808.15 2017.6 2061.2 2933.8 3021.7 2760.6 True False 2118.370625362939 2030.8349777105504 2215.029826358422 1866.0185172841366 2270.0821658002 1999.4872328471695 2384.171803762585 2353.381412160259 2269.298984315902 2339.0958713382065 2075.0668313159813 1.0208686262020268 0.97868413058418 1.0674498733872961 0.8992570692774898 1.0939802668237641 0.9635772702217594 1.148961454051373 1.1341231890193022 1.0936028421199047 1.1272388127638189 1.0 11.018942086497784 -7.71871727513956 24.99968915655748 1.060641828639145 1.0050374475576702 0.266926799240362 0.06609816282200473 223.84049982446197 130984.1227877056 0.010342046554322177 0.015339662680709035 1.9110969740958394e-08 7.71871727513956 -0.05560438108147481 GILSLPHQAS(ph)PVSR ddPTM_A549_PD325901_60min_R1 2 GILSLPHQASPVSR 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 GILSLPHQAS(0.998)PVS(0.002)R;GILSLPHQAS(0.994)PVS(0.006)R 106.93 5.6273e-06 131817000.0 2565.3 2482.6 3011.1000000000004 2503.8999999999996 3330.5 2982.8 2539.6000000000004 2692.6 3174.3 2275.27 3253.5 True False 2825.7273675259516 2691.8174146854576 3215.4513532152337 2658.560216230508 3096.5771696012557 2958.509065744188 2636.245867722444 2638.8939806961616 3040.8952099256016 2131.6090638999926 2853.3401256357674 0.9903226545402949 0.9433917080199753 1.1269078384052733 0.9317361755595613 1.0852464246306042 1.0368581856623165 0.9239157449324582 0.9248438196999652 1.0657317655910523 0.7470574730115772 1.0 11.478436014869704 GILTLK ddPTM_A549_MK2206_60min_R1 1 GILTLK 6 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;Q6S8J3;A5A3E0;P0CG38;P0CG39;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 116.35 0.053632000000000006 70110000.0 1321.5 1131.3 1407.0 1350.8 1692.5 1151.6 1488.2 1379.6 1978.4 1496.3 2115.2 False True 1544.5368924269785 1188.8783378270127 1606.5337569004407 1681.7460606397171 1443.535492041192 1273.4615476297872 1758.586676427179 1575.1625248478035 1530.2955588556067 1158.2847907745183 1589.937463449816 0.971445058647572 0.7477516349903518 1.010438330960901 1.0577435272143954 0.9079196667955959 0.8009507146694025 1.1060728593761362 0.9907072202890583 0.9624878927849153 0.7285096536195166 1.0 10.634754306181074 -7.762772545651915 24.999996959451966 0.991041571087425 0.9187545569103812 0.0 0.11938790713160252 57.13109502118122 1071350.5338229204 0.013729925966228268 0.019544094933159756 1.726742006968522e-08 7.762772545651915 -0.07228701417704375 GILTLK ddPTM_A549_PD325901_60min_R1 1 GILTLK 6 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;Q6S8J3;A5A3E0;P0CG38;P0CG39;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 118.06 0.051093 136940000.0 4995.3 4539.4 5457.0 5562.0 6014.8 5159.7 5252.1 5494.0 5873.5 4553.0 5278.2 False True 5502.419178654499 4921.951169025688 5827.344835606769 5905.552107781496 5592.341197933533 5117.6811138930825 5451.971539559399 5384.417860040377 5626.657220646444 4265.522802980158 4629.014861266548 1.1886803874181078 1.0632826457763822 1.258873650280817 1.2757686645589368 1.2081061231251715 1.1055659286634543 1.1777822502102924 1.1631887175594728 1.2155193684357564 0.9214752881162852 1.0 12.17648947901389 -10.806964735125982 0.8299700655613965 0.9878774177089473 1.1854010060858196 0.6355170135588378 0.06345818997071549 0.42965048577790904 0.4710049993440992 0.0564957110837469 0.011054971740890887 1.5596791442138337e-11 10.806964735125982 0.19752358837687223 GINGGPSRMS(ph)PK ddPTM_A549_MK2206_60min_R1 3 GINGGPSRMSPK 12 1 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GINGGPS(0.002)RMS(0.998)PK;GINGGPS(0.011)RMS(0.989)PK;GINGGPS(0.003)RMS(0.997)PK 63.185 0.0016292000000000001 71322000.0 8188.1 10699.400000000001 10031.0 8853.8 12356.6 8546.0 7731.800000000001 6792.0 14936.7 15130.9 15729.4 True False 9570.051100175051 11243.953759167627 11453.546635016572 11022.981397462187 10538.960508689039 9450.33204762432 9136.56797795973 7754.786799627636 11553.561299008565 11712.819181133556 11823.355870644638 0.8094191873168467 0.9509951220435167 0.9687221428777053 0.9323056430053295 0.8913679520427418 0.7992935466898929 0.7727558975573305 0.6558871173692268 0.9771812187176124 0.9906509885416267 1.0 13.529351959124197 -8.960445027038325 24.999923880989396 0.9899331454845822 0.8528358497394664 0.35087403476897205 0.08576940025676634 134.22213106904854 84832.78751036766 0.016091979405672502 0.01710550681749608 1.095355196567375e-09 8.960445027038325 -0.13709729574511587 GINGGPSRMS(ph)PK ddPTM_A549_PD325901_60min_R1 3 GINGGPSRMSPK 12 1 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GINGGPS(0.014)RMS(0.986)PK;GINGGPS(0.001)RMS(0.999)PK;GINGGPS(0.018)RMS(0.982)PK 55.841 0.0040093 119895000.0 7913.7 7913.299999999999 7642.3 9007.900000000001 8630.0 12095.7 9111.4 10427.0 9532.5 8872.6 11142.9 True False 8717.09299824197 8580.18156272876 8160.952434883194 9564.297524574784 8023.858571883748 11997.196629516557 9458.139312949394 10219.025305176738 9131.882175161705 8312.38252179261 9772.393940662922 0.8920120342232781 0.8780020141253857 0.8351026866534186 0.9787056869226026 0.8210739989202114 1.2276619938126148 0.9678426156761942 1.0457033729120746 0.9344570256387181 0.8505983868706719 1.0 13.254496306759416 GINGVSPK ddPTM_A549_MK2206_60min_R1 2 GINGVSPK 8 0 P18124;A8MUD9;C9JZ88;C9JIJ5 P18124 RPL7 60S ribosomal protein L7 0 ; 108.46 0.0048432 8508000.0 5957.9 6243.0 6171.299999999999 6307.5 7312.6 6469.3 5770.4 5510.4 8960.3 8363.9 8265.4 False True 6963.447863330075 6560.742033991018 7046.483137142635 7852.837783154438 6236.926226942648 7153.877032026208 6818.806986732565 6291.516074892246 6930.80635665886 6474.489181019172 6212.8730665649155 1.1208096139617658 1.0559916424654139 1.134174650221628 1.2639623728054459 1.0038715035894064 1.1514603558417091 1.0975287783406573 1.0126580742089444 1.1155557633967386 1.0421087171186814 1.0 12.60104486395245 -14.99999999999999 0.20601252356457242 0.47159920337764877 1.1262823762608172 0.20488172040365193 0.06726488755570378 45.23919784652457 0.5401320759329481 9.6539668288022 0.051458206354158466 1.0000000000000245e-15 14.99999999999999 0.6546831728831684 GINGVSPK ddPTM_A549_PD325901_60min_R1 1 GINGVSPK 8 0 P18124;A8MUD9;C9JZ88;C9JIJ5 P18124 RPL7 60S ribosomal protein L7 0 77.923 0.012123 3872500.0 4929.1 4718.8 4814.6 4850.2 5384.0 5399.1 4491.0 5065.6 5325.1 5758.9 5725.8 False True 5429.498603388368 5116.469836630044 5141.347708541752 5149.785838396586 5005.846413791667 5355.131519665901 4661.907462569495 4964.562634113676 5101.304565534075 5395.282071179976 5021.562898836728 1.0812368007271482 1.0188998803172018 1.023854089278215 1.0255344684798355 0.9968702005009832 1.0664272513456807 0.9283777892435542 0.988648899581392 1.0158798502187076 1.074422879862726 1.0 12.293920739570739 -2.000000262885261 0.6639148777252957 1.0041424204729006 8.028445717880098 0.19132428098964605 0.03761252268471693 191.06287370450244 1.0801767104941284 0.0047945705138846585 1982.6053477532603 0.009999993946844999 2.000000262885261 7.024303297407197 GINT(ph)LER ddPTM_A549_MK2206_60min_R1 1 GINTLER 7 0 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 GINT(1)LER 52.57899999999999 0.049791 2546400.0 931.19 753.89 825.71 812.77 1375.0 777.42 701.59 799.3 1485.6 1423.8 1385.2 True False 1088.3521065902976 792.2597808754585 942.8080941082176 1011.8986864866317 1172.7393214514852 859.6860683903695 829.0598214719432 912.6032227535885 1149.1139720157141 1102.1625911279546 1041.2166104248706 1.0452696352454396 0.7608981387188736 0.9054869896125675 0.9718426275141004 1.1263163780809706 0.8256553533462867 0.7962414479093295 0.8764777795671151 1.1036262392575698 1.0585334310775303 1.0 10.024054516870612 -8.756182206697911 24.992119838206094 1.04893461447055 0.9103668599179081 0.2670849364587332 0.10348648897365002 130.65934065047142 621142.1082987123 0.01826280833372332 0.02041005331428083 1.7531448218815267e-09 8.756182206697911 -0.13856775455264192 GIPHLVTHDAR ddPTM_A549_MK2206_60min_R1 2 GIPHLVTHDAR 11 0 P62701;Q8TD47;C9JEH7;P22090 P62701 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 0 ; 97.456 0.00027419 21264000.0 601.2 541.8 665.3299999999999 569.99 681.28 579.77 597.64 250.43 806.81 983.7900000000001 821.01 False True 702.6678620712063 569.3753057850927 759.6837984922313 709.6375755878231 581.0646144861589 641.1208765798209 706.2234520225377 285.9292194097096 624.0688232108228 761.5511557281716 617.1305582767276 1.1386048748474433 0.9226172616942087 1.230993650052865 1.1498986171895484 0.941558648641093 1.0388739756625953 1.144366362272827 0.4633204685377062 1.011242782975242 1.2340195206906028 1.0 9.269431923643724 -6.764707980765985 24.992173347144362 0.9733324827035845 1.1057110139688584 0.0989215943167765 0.194709531574593 147.36826679703512 1126811.0994090007 0.025099524275081223 0.04887082678873491 1.7190638957092502e-07 6.764707980765985 0.13237853126527388 GIPHLVTHDAR ddPTM_A549_PD325901_60min_R1 2 GIPHLVTHDAR 11 0 P62701;Q8TD47;C9JEH7;P22090 P62701 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 0 ; 106.4 0.00015502 32763000.0 608.85 606.76 788.8499999999999 630.4 976.0600000000001 492.07 777.3199999999999 806.63 905.37 874.62 1022.01 False True 670.6600037883194 657.8937946244049 842.3861047404058 669.3383762577229 907.5049128242006 488.0627450652883 806.9013379658246 790.5411318610066 867.3204474089848 819.3963439364167 896.309249055175 0.7482462157958106 0.7340031304127559 0.9398386836110293 0.7467716939921031 1.0124908493143714 0.5445249455807458 0.9002488134719152 0.8819959547380979 0.9676575895242093 0.9141893211524544 1.0 9.807852773734666 -8.4990539986021 1.732583625949166 0.9867838306811765 0.8004949141746059 0.25607888263616174 0.11806706237744029 0.27618987712445875 1.6185777523532505 0.01947452960524182 0.023068083853456597 3.1691733950098935e-09 8.4990539986021 -0.18628891650657053 GIPHSAS(ph)PVSPDGVQIPLK ddPTM_A549_MK2206_60min_R1 2 GIPHSASPVSPDGVQIPLK 19 0 Q6PJF5-2;Q6PJF5 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 GIPHS(0.015)AS(0.98)PVS(0.005)PDGVQIPLK;GIPHS(0.033)AS(0.959)PVS(0.008)PDGVQIPLK 114.02 2.2323e-14 12282400.0 3111.7 3355.8999999999996 2934.8999999999996 2911.4 4097.5 2848.0 2786.6 2862.2 4270.7 3992.6 4102.4 True False 3636.878886239141 3526.7009757921605 3351.112951760554 3624.6931306977126 3494.76317792543 3149.373469650605 3292.8891496653546 3267.92561511988 3303.39326890651 3090.668887018871 3083.660859519915 1.1794030056876472 1.143673424690814 1.0867320060229573 1.1754512885252981 1.1333163201576968 1.021309934238657 1.0678506164189578 1.0597551948785486 1.0712569959527924 1.0022726323737323 1.0 11.590428391292123 -2.0000000002535816 0.0994735420393338 0.950871194323311 1.5853752191463177 0.7173209545954427 0.03289819363311189 46.71422638174658 0.31929613443452864 0.22746261548730684 4.062104852697906 0.009999999994161068 2.0000000002535816 0.6345040248230067 GIPHSAS(ph)PVSPDGVQIPLKEYGR ddPTM_A549_MK2206_60min_R1 2 GIPHSASPVSPDGVQIPLKEYGR 23 1 Q6PJF5-2;Q6PJF5 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 GIPHSAS(1)PVSPDGVQIPLKEYGR;GIPHS(0.002)AS(0.998)PVSPDGVQIPLKEYGR 168.79 1.1589999999999999e-40 16183100.0 2495.3 2297.3999999999996 2922.0 2270.7 3225.2 2729.8999999999996 2404.87 2528.6000000000004 3965.2 4447.4 4130.6 True False 2916.445635772257 2414.3278470112054 3336.383537784707 2827.021601935596 2750.7773523966066 3018.776206039039 2841.8037498585095 2887.036793512727 3067.0885311232587 3442.729251146556 3104.8580212395095 0.9393169078333459 0.7775968596616752 1.0745687934718409 0.9105155799707078 0.885959143245607 0.9722751202755142 0.9152765538451305 0.9298450279411409 0.9878353567674013 1.1088201868155514 1.0 11.600311583144277 -8.771601012631484 3.9896731698867542 0.9947983337134862 0.924629116278946 0.25151984787384885 0.07471123970681501 0.25417849812706905 8.84411166538965 0.010896041058170734 0.011848999809180683 1.6919946573249533e-09 8.771601012631484 -0.0701692174345403 GIPHSAS(ph)PVSPDGVQIPLKEYGR ddPTM_A549_PD325901_60min_R1 3 GIPHSASPVSPDGVQIPLKEYGR 23 1 Q6PJF5-2;Q6PJF5 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 GIPHSAS(1)PVSPDGVQIPLKEYGR;GIPHS(0.107)AS(0.879)PVS(0.014)PDGVQIPLKEYGR;GIPHS(0.003)AS(0.997)PVSPDGVQIPLKEYGR 189.2 2.6994e-50 53407100.0 4914.6 5566.200000000001 5213.7 5755.6 6193.7 5633.7 5770.4 6446.1 6075.7 6354.900000000001 7250.799999999999 True False 5413.5265740627 6035.283208580599 5567.533034525015 6111.110340083992 5758.675879105029 5587.821015047281 5989.995729684041 6317.527478632377 5820.359457815887 5953.650529465984 6358.99756660822 0.8513176042855732 0.9490934923882532 0.8755362737927012 0.9610178768072014 0.9055949178758071 0.8787267106987948 0.9419716971017811 0.9934785180303249 0.9152951226745581 0.9362561421204566 1.0 12.634583641419013 -14.99999999999887 0.1519211852716196 1.2938313267969723 0.8922773062048814 0.20415333097011767 0.04078719180992329 43.196357217511505 0.4304117063402799 3.8278312560845205 0.06605496724350107 1.0000000000026013e-15 14.99999999999887 -0.4015540205920909 GIPHSASPVS(ph)PDGVQIPLK ddPTM_A549_PD325901_60min_R1 1 GIPHSASPVSPDGVQIPLK 19 0 Q6PJF5-2;Q6PJF5 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 GIPHS(0.126)AS(0.109)PVS(0.765)PDGVQIPLK 103.95 5.766699999999999e-10 1533300.0 809.21 785.53 697.51 1087.8 861.13 923.06 704.02 759.58 1089.9 1390.8 900.77 True False 891.3604034910836 851.7293699177751 744.847223068366 1154.990935426952 800.6471995372252 915.5429053995681 730.8118663545266 744.4295810210177 1044.095293229346 1302.9846506445876 789.9810004514924 1.1283314446570873 1.078164372853261 0.942867262178038 1.462049004680933 1.013501842550184 1.1589429427749707 0.9251005605664576 0.9423385886439788 1.3216713979609906 1.64938732691027 1.0 9.62567414574291 -8.746314479209893 24.99769412282361 1.1519004150868701 1.08448384898928 0.07051147353044518 0.21745498422588042 805.1428263211961 1330700.3542970316 0.029774291131387784 0.03369804370678976 1.7934345034539324e-09 8.746314479209893 -0.06741656609759006 GIPLATGDTS(ph)PEPELLPGAPLPPPK ddPTM_A549_PD325901_60min_R1 1 GIPLATGDTSPEPELLPGAPLPPPK 25 0 K7EL60;K7ER90;K7EL20;K7ENA8;O75821 K7EL60 EIF3G Eukaryotic translation initiation factor 3 subunit G 1 GIPLAT(0.004)GDT(0.2)S(0.796)PEPELLPGAPLPPPK 87.052 1.0022e-08 36648000.0 12448.0 11372.0 12505.0 12954.0 13850.0 12104.0 12780.0 12691.0 14343.0 14343.0 13851.0 True False 13711.711796266743 12330.358350037468 13353.66449867374 13754.139159331438 12877.223779906126 12005.429037068414 13266.349893484341 12437.868049103101 13740.213589126075 13437.380532208314 12147.41480872324 1.128776123329563 1.0150602860110494 1.0993009384255383 1.1322688305214033 1.060079365253815 0.9883114412497987 1.09211302177296 1.023910704043076 1.1311224491369984 1.1061926133088604 1.0 13.568361694246798 -6.962074611229446 24.97913707998104 1.0567524586279082 1.089558019009211 0.10868035441638901 0.049741421280724125 383.650931689333 252685.854321368 0.008312164456497847 0.015708502347852264 1.0912528445186021e-07 6.962074611229446 0.03280556038130267 GIPNMLLS(ph)EEETES ddPTM_A549_MK2206_60min_R1 2 GIPNMLLSEEETES 14 0 F5GYQ2;Q9UI30-2;Q9UI30 F5GYQ2 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein 1 GIPNMLLS(0.961)EEET(0.019)ES(0.019);GIPNMLLS(0.929)EEET(0.036)ES(0.036) 63.537 0.005567100000000001 1327590.0 937.9100000000001 1137.13 845.31 821.4100000000001 1377.1799999999998 1124.07 1135.6399999999999 807.57 1196.6 1497.96 1257.8600000000001 True False 1096.2062783020706 1195.0050599250692 965.1876688312082 1022.6554868744958 1174.5986463393142 1243.0183413027219 1341.9710880377388 922.0455205794013 925.5720105775468 1159.569795621597 945.4986468300801 1.159394867435569 1.2638887045809057 1.0208239557688827 1.0816043897081133 1.2423060046435017 1.3146696142507652 1.4193262915149476 0.9751949658211476 0.9789247331877838 1.2264108462864765 1.0 9.884931583208429 -8.311738396435398 24.97668505841743 0.9886557013825502 1.2088206422657208 0.2605114359746852 0.12452533468152928 224.28923559179478 111373.45864433059 0.017578820353612534 0.021251769219090434 4.87822248408924e-09 8.311738396435398 0.22016494088317062 GIPNMLLS(ph)EEETES ddPTM_A549_PD325901_60min_R1 2 GIPNMLLSEEETES 14 0 F5GYQ2;Q9UI30-2;Q9UI30 F5GYQ2 TRMT112 Multifunctional methyltransferase subunit TRM112-like protein 1 GIPNMLLS(0.726)EEET(0.234)ES(0.04);GIPNMLLS(0.991)EEET(0.004)ES(0.004) 72.937 0.00042178 5028900.0 2563.3500000000004 2575.1000000000004 2615.1 2681.5 3013.83 2489.0 2373.9 3183.9 2657.6 3451.6000000000004 3095.4 True False 2823.5794049614683 2792.112714314238 2792.5764118737875 2847.1301648716444 2802.1489779490607 2468.7304092253194 2464.240063547924 3120.394616778771 2545.9103140529473 3233.665386946261 2714.6854233572967 1.0401129282484232 1.0285216439042082 1.028692454693392 1.0487882464667126 1.0322186702883593 0.9093983369064542 0.9077442426092808 1.1494497999402549 0.9378288519722398 1.1911749918143861 1.0 11.406569313462743 -7.047195186108755 24.81789393634637 0.9755901407787105 1.0360354707104065 0.0 0.08944262887704416 490.76530745259356 258071.16574486633 0.009056514862738797 0.015686607840366778 8.970255513445447e-08 7.047195186108755 0.060445329931695935 GIPVVEHK ddPTM_A549_PD325901_60min_R1 1 GIPVVEHK 8 0 Q02880;Q02880-2;E9PCY5;P11388;P11388-2;P11388-3;P11388-4;J3KTB7 Q02880;P11388 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha 0 79.469 0.0043951 2222700.0 791.3 926.11 981.59 1029.3 917.52 845.36 935.31 958.77 990.51 909.35 1186.5 False True 871.6321934757285 1004.1565398833282 1048.2066001801809 1092.8775232900919 853.076560472164 838.4756684382147 970.9037338712706 939.6465802094855 948.8823092913098 851.9334858093581 1040.5680218431964 0.8376503747748987 0.965008071365319 1.007340777514433 1.0502701412582693 0.8198181594712839 0.8057865039452125 0.9330516732115917 0.9030131240676174 0.9118887851372941 0.8187196491972691 1.0 10.023155561670222 -10.60893607975398 0.8850543542314762 1.0001124794403504 0.9173590461758996 0.0 0.08955028784504232 0.9752150990727888 1.3601046287835599 0.051490470353499594 0.013962077548582051 2.460729752144258e-11 10.60893607975398 -0.08275343326445084 GIQLS(ph)PGVGSSAGPPGDLEDDEGLK ddPTM_A549_PD325901_60min_R1 1 GIQLSPGVGSSAGPPGDLEDDEGLK 25 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 GIQLS(0.938)PGVGS(0.031)S(0.031)AGPPGDLEDDEGLK 68.733 4.4504e-05 1322500.0 844.48 830.87 847.3 605.3 1062.3 870.57 841.61 730.76 1082.2 823.29 868.36 True False 930.2109879266817 900.890330838519 904.8028732288092 642.6880062639585 987.6877127360498 863.4803665565638 873.6379290966636 716.1844185298701 1036.7188974518735 771.3073288964497 761.5572249875756 1.221459080690696 1.1829581563660125 1.1880957117090847 0.8439129525354363 1.2969317082536553 1.1338351711792256 1.147173055985276 0.9404210150347588 1.3613145059043816 1.0128028513012048 1.0 9.572808637654614 -8.754792611541546 24.993366766401095 1.170620737038256 1.1219089517667529 0.0 0.1507656577125468 703.472620921793 2645215.7159592705 0.028629704316592872 0.03210640492294666 1.7587632749367652e-09 8.754792611541546 -0.048711785271503105 GIQLS(ph)PGVGSSAGPPGDLEDDEGLKHLQQEAEK ddPTM_A549_MK2206_60min_R1 2 GIQLSPGVGSSAGPPGDLEDDEGLKHLQQEAEK 33 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 GIQLS(0.999)PGVGS(0.001)SAGPPGDLEDDEGLKHLQQEAEK;GIQLS(0.999)PGVGSSAGPPGDLEDDEGLKHLQQEAEK 104.86 1.6777e-14 31899000.0 2215.2 3628.3 3286.6 2616.2 4723.5 2845.9 2804.8 2727.6000000000004 5180.6 4800.8 4978.9 True False 2589.0716035597743 3812.964972277691 3752.6893002338225 3257.169117445682 4028.679407182613 3147.051249044471 3314.395854080737 3114.2456529246665 4007.202371718234 3716.295945699597 3742.5017193505546 0.691802381859443 1.0188278478438118 1.0027221312499586 0.8703186696226572 1.0764669489268048 0.8408950710089684 0.8856097077908336 0.8321293846900595 1.0707282647323977 0.9929977924885215 1.0 11.869787263737482 -8.77403995453482 24.967600787188818 1.0333994629759282 0.9117052223211353 0.2079092908262381 0.10141925769800592 228.83835833508095 453433.79861043027 0.016715868383465546 0.017854479243659346 1.6825192643376035e-09 8.77403995453482 -0.12169424065479295 GIQLS(ph)PGVGSSAGPPGDLEDDEGLKHLQQEAEK ddPTM_A549_PD325901_60min_R1 2 GIQLSPGVGSSAGPPGDLEDDEGLKHLQQEAEK 33 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 GIQLS(1)PGVGSSAGPPGDLEDDEGLKHLQQEAEK;GIQLS(1)PGVGSSAGPPGDLEDDEGLKHLQQEAEK 246.34 5.476599999999999e-132 50531000.0 4808.1 5147.2 4850.2 5160.3 6869.1 5750.299999999999 6171.299999999999 6971.5 6033.200000000001 6131.6 6463.4 True False 5296.214772463855 5580.972608099969 5179.363738621941 5479.040011108389 6386.638113108535 5703.471463305892 6406.152198564941 6832.4479634640475 5779.645585018158 5744.449729574595 5668.442774868367 0.9343332874321633 0.9845689247925009 0.9137189779149205 0.9665864557017819 1.1267006419160412 1.0061795963774791 1.1301432250436196 1.2053483178407336 1.0196178764726742 1.0134087892786379 1.0 12.468736739487804 -6.546223473839666 24.63507103961445 1.0406147434420905 0.9468948065399732 0.3892998831038299 0.06691746417288233 203.4096416696442 214652.0690380515 0.010610774142857047 0.02208915365320278 2.842997816629564e-07 6.546223473839666 -0.09371993690211733 GIQLYDTPYEPEGQS(ph)VDSDSESTVSPR ddPTM_A549_PD325901_60min_R1 1 GIQLYDTPYEPEGQSVDSDSESTVSPR 27 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 GIQLYDTPYEPEGQS(0.672)VDS(0.264)DS(0.047)ES(0.007)T(0.008)VS(0.001)PR 108.04 4.101e-13 7950900.0 1417.4 1136.2 1264.9 1642.1 1334.4 1227.2 1080.1 1585.6 1853.8 1244.9 1577.7 True False 1561.293404565269 1231.9515614942468 1350.7437204616085 1743.5287875203155 1240.6763474300894 1217.2060900768636 1121.2037965533982 1553.9739641208635 1775.8912327631533 1166.2968015440372 1383.6529018643155 1.1283851625372252 0.8903617083694413 0.9762157247974795 1.2600911581012175 0.8966673258578207 0.8797047933313451 0.8103215734543708 1.1230952228171238 1.2834802936273548 0.8429113977736645 1.0 10.434266363790762 -8.481455854051307 24.258923756827432 1.1375195092705346 0.9772035214616575 0.0 0.15990780028978155 439.87173799391627 257607.00391086118 0.02528702649349697 0.030568517391528063 3.3002295297416132e-09 8.481455854051307 -0.16031598780887713 GIQLYDTPYEPEGQSVDS(ph)DSESTVSPR ddPTM_A549_PD325901_60min_R1 1 GIQLYDTPYEPEGQSVDSDSESTVSPR 27 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 GIQLYDTPYEPEGQS(0.088)VDS(0.32)DS(0.142)ES(0.192)T(0.224)VS(0.033)PR 82.05799999999999 9.1632e-07 8897500.0 1547.4 1380.2 1287.7 1445.4 1639.4 1221.8 1286.1 1482.0 1660.3 1344.8 1872.4 True False 1704.4909088643278 1496.5142978123217 1375.091065569146 1534.6790752584275 1524.2541996229693 1211.8500658864984 1335.0432392809241 1452.440347393491 1590.523364848778 1259.889098494997 1642.106670121535 1.0379903692481656 0.9113380543674195 0.8373944827027425 0.9345794053347602 0.9282309288166747 0.7379849847372019 0.8130064042563784 0.8844981716601843 0.9685871166524528 0.7672394987603031 1.0 10.681332131300866 -8.814791540797222 3.701359747681077 0.9865797624495476 0.8801839451395944 0.0 0.09817632857077219 0.2136480532953731 5.793706376210457 0.013279208217249523 0.014210297300148956 1.5318225524949275e-09 8.814791540797222 -0.10639581730995318 GIQSLGS(ph)PIK ddPTM_A549_MK2206_60min_R1 1 GIQSLGSPIK 10 0 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 GIQS(0.001)LGS(0.999)PIK 113.77 0.00010071 2040600.0 2177.0 2182.7 1819.3 1996.3 2609.4 2147.2 1957.5 1958.8 2916.4 2449.4 3507.9 True False 2544.424377460107 2293.790106934519 2077.3040966090757 2485.393589617311 2225.5607166512773 2374.4152788039946 2313.152411709585 2236.465898573413 2255.840056533811 1896.0788388178194 2636.791616885218 0.964969837269802 0.869917096309689 0.7878150413201586 0.9425824830834566 0.8440411833834187 0.9004940942617367 0.8772602267455853 0.8481769603072765 0.855524586049232 0.7190855836600445 1.0 11.364567845562942 -10.735321907724657 0.9099275393956356 1.0027004082617132 0.8741048044503433 0.0 0.09484687391137543 0.38031359442685914 0.5408260297062458 0.03307372973322395 0.007843813049125029 1.839408090119932e-11 10.735321907724657 -0.12859560381136992 GIQSLGS(ph)PIK ddPTM_A549_PD325901_60min_R1 1 GIQSLGSPIK 10 0 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 GIQSLGS(1)PIK 91.85799999999999 0.00063221 4095100.0 2494.2 2760.1 2733.1 2583.6 3811.8 2755.1 2690.0 2833.7 3478.1 2846.5 3561.4 True False 2747.409347867006 2992.703313571792 2918.584601465431 2743.183104218676 3544.0723179961133 2732.6633790504934 2792.369422024482 2777.179630505355 3331.927552418556 2666.771504213272 3123.370377574681 0.8796296998886148 0.9581647232934467 0.9344343605293884 0.8782765963058077 1.1346948615002588 0.8749085278744386 0.894024430171095 0.8891611607912651 1.0667731167399435 0.8538121265925684 1.0 11.60888794278367 -8.764664955083266 24.999697990435436 1.0315317512256346 0.9334795517071449 0.0 0.08934963058462646 79.48287358982003 616028.1045570414 0.012243593913504621 0.013302298394712935 1.719234212314152e-09 8.764664955083266 -0.09805219951848965 GIQSLGS(ph)PIKVNQR ddPTM_A549_MK2206_60min_R1 2 GIQSLGSPIKVNQR 14 1 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 GIQSLGS(1)PIKVNQR;GIQS(0.005)LGS(0.995)PIKVNQR 93.495 1.5992000000000002e-05 13923600.0 5322.8 6673.299999999999 6131.3 6668.1 9783.3 6055.799999999999 7525.6 7025.0 9541.6 9299.9 9644.8 True False 6221.158510034294 7012.942466031113 7000.810535667143 8301.78479934238 8344.189529859144 6696.620736485292 8892.904107055765 8020.815263160206 7380.44283480421 7199.046130938937 7249.7299770616455 0.8581227893615649 0.9673384371859731 0.9656650051543864 1.1451164147643382 1.1509655609602565 0.9237062287386693 1.2266531491784065 1.1063605525362044 1.0180300312089063 0.9930088642910737 1.0 12.823711546271207 -5.512130313138543 1.7395740665168438 1.0417728977351925 0.8479546997933219 0.3235251077058465 0.0872014624493687 0.5839909723172858 2.474517992708964 0.012580019509605292 0.15842992644693066 3.0751739485444094e-06 5.512130313138543 -0.1938181979418706 GIQYIDLSSDS(ph)EDVVSPNCSNTVQEK ddPTM_A549_PD325901_60min_R1 2 GIQYIDLSSDSEDVVSPNCSNTVQEK 26 0 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 GIQYIDLS(0.085)S(0.367)DS(0.54)EDVVS(0.008)PNCSNTVQEK;GIQYIDLS(0.053)S(0.362)DS(0.575)EDVVS(0.01)PNCSNTVQEK 122.68 6.605599999999999e-18 13442600.0 4210.5 5175.6 4551.6 4874.2 5047.9 4421.4 4915.4 4725.1 4101.9 4653.9 4904.1 True False 4637.946860393728 5611.7659757697775 4860.498946994272 5175.268263888632 4693.352918309617 4385.393584310498 5102.458236810088 4630.854173730757 3929.511407741494 4360.05195976046 4300.926789651258 1.07835987154057 1.304780632228527 1.1301050179904102 1.20329141066553 1.0912422247229598 1.0196392077313385 1.186362494959795 1.0767107649619516 0.9136429425389311 1.0137470766188037 1.0 12.070431858607751 -8.578875768891587 4.537239915660523 0.9596193391292778 1.1452390684199791 0.49334543119833385 0.07436634145155069 0.1116359814233446 4.8073948519524015 0.012735255882909878 0.014562564982260207 2.6370856234026604e-09 8.578875768891587 0.18561972929070136 GIREPVSVGT(ph)PSEGEGLGADGQEHKEDTFDVFR ddPTM_A549_PD325901_60min_R1 1 GIREPVSVGTPSEGEGLGADGQEHKEDTFDVFR 33 2 M0R2Z9;Q8IX01-4;Q8IX01 M0R2Z9 SUGP2 SURP and G-patch domain-containing protein 2 1 GIREPVS(0.046)VGT(0.629)PS(0.324)EGEGLGADGQEHKEDTFDVFR 47.795 0.0055818000000000005 2470800.0 739.84 1021.3 833.46 628.67 1097.0 1096.1 975.82 1126.8 809.32 789.43 1145.6 True False 814.9480121585785 1107.368535252662 890.0236076021282 667.5015180868379 1019.9505044445509 1087.1737250107967 1012.955364089193 1104.3250900425005 775.3070948861123 739.5852550750334 1004.6984625567354 0.8111369157316276 1.1021899371027741 0.8858614208856406 0.6643799537506947 1.01518071586275 1.0820895676939526 1.0082182882130084 1.0991607245344412 0.7716813788219872 0.7361265918462266 1.0 9.97254685885317 -3.725061098269038 15.890284012607712 0.9228234999729957 0.4962477787711053 0.0 0.15037649250158944 0.0 0.0 0.019311228077427904 0.0 0.00018833841089097543 3.725061098269038 -0.4265757212018904 GIRLS(ph)ENVIDR ddPTM_A549_PD325901_60min_R1 1 GIRLSENVIDR 11 1 C9JRZ6;Q9NX63;F8WAR4 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 GIRLS(1)ENVIDR 72.321 0.00057034 3340100.0 569.76 498.18 503.47 404.05 526.11 497.1 339.86 542.19 571.92 484.98 445.42 True False 627.6016157648568 540.163376962862 537.6385018110573 429.007250835871 489.1578485809688 493.05178241297995 352.79355827852817 531.3755951101732 547.8841913053744 454.35828003279516 390.6361637500182 1.6066142206088248 1.382778726315087 1.3763152306480027 1.0982271756856792 1.252208305255624 1.2621764909827986 0.903125698583025 1.360282647692135 1.4025434461720363 1.1631239557317457 1.0 8.609681704917827 -10.934567192284714 1.1562619555360825 0.9977519211381791 1.2919042598466726 0.15683802207128328 0.1771573242873464 0.5419801050632305 1.2714932088188373 0.12877416398793604 0.029305209621857994 1.1626066632899188e-11 10.934567192284714 0.29415233870849344 GIS(ph)PAHK ddPTM_A549_MK2206_60min_R1 1 GISPAHK 7 0 Q9BZF3-6;Q9BZF3-2;Q9BZF3-4;Q9BZF3;Q9BZF3-5 Q9BZF3-6 OSBPL6 Oxysterol-binding protein-related protein 6 1 GIS(1)PAHK 58.981 0.00966 4040500.0 997.72 1238.0 1140.6 856.75 1686.1 1092.8 1168.7 1272.2 1355.0 1598.0 1270.8 True False 1166.1107440879641 1301.0089120744633 1302.3542310736618 1066.6537884609688 1438.0769235631633 1208.4393706580686 1381.037662102167 1452.5382459490986 1048.0946634903698 1237.0106901408 955.2252877042491 1.2207703869424864 1.3619916985251268 1.3634000772777788 1.1166515398943453 1.50548456167799 1.2650831026075369 1.445771672796999 1.5206237362497719 1.0972224845610183 1.2949936586308166 1.0 9.899697219386876 -8.903871790644414 6.484170322965527 1.0423833421539754 1.3482154402130582 0.28864434856267474 0.13722967821111834 0.10350983936164858 5.900380924916595 0.019573372232841123 0.020731468675872833 1.2477518123716674e-09 8.903871790644414 0.30583209805908274 GIS(ph)PAHK ddPTM_A549_PD325901_60min_R1 1 GISPAHK 7 0 Q9BZF3-6;Q9BZF3-2;Q9BZF3-4;Q9BZF3;Q9BZF3-5 Q9BZF3-6 OSBPL6 Oxysterol-binding protein-related protein 6 1 GIS(1)PAHK 53.968 0.013405000000000002 6570700.0 1605.4 1448.5 1558.4 1335.5 1691.0 1311.3 1786.0 1685.1 1445.2 1581.5 1719.5 True False 1768.3790261669847 1570.5701785111924 1664.1623954204845 1417.9908018594376 1572.2299936333052 1300.6212075601297 1853.9672073367 1651.4893585646225 1384.4632698183777 1481.6438200995221 1508.012400808577 1.1726554935614604 1.0414835963345346 1.1035468902829857 0.9403044703738039 1.0425842604412905 0.8624738144479138 1.2294111151490708 1.0951430887962956 0.9180715417698463 0.9825143475644389 1.0 10.558432577003066 -2.0000000000000004 0.3774545341824531 0.978697184975864 3.393940898926203 0.1332598174009525 0.09786208072205765 68.28168700483037 0.8176105688954044 0.02369293908948881 122.0382647573832 0.00999999999999999 2.0000000000000004 2.415243713950339 GIS(ph)PIVFDR ddPTM_A549_MK2206_60min_R1 2 GISPIVFDR 9 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 GIS(1)PIVFDR;GIS(1)PIVFDR 125.75 7.0152e-05 189958000.0 1850.96 1846.5900000000001 1850.17 1532.1 2642.2 1673.46 1677.15 1943.6999999999998 2823.8999999999996 2559.5 2821.3 True False 2163.356796372788 1940.5735435764002 2112.551926797788 1907.4645687785826 2253.535880101176 1850.5444264471546 1981.8664456187648 2219.2254273316003 2184.2911588416637 1981.3071723500493 2120.693346081206 1.020117689514337 0.9150656068037153 0.9961609634422334 0.8994532718760846 1.0626410858813924 0.8726129262709033 0.9345370226586616 1.046462201351492 1.029989160327201 0.934273300763297 1.0 11.050320305779188 -8.256673955824038 24.948205089312108 1.0169797873074289 0.9556807517405302 0.10539396534025913 0.05843166516480715 410.90588171095806 2151195.786635163 0.00781789665889464 0.009933178051778874 5.537656897221058e-09 8.256673955824038 -0.06129903556689864 GIS(ph)PIVFDR ddPTM_A549_PD325901_60min_R1 2 GISPIVFDR 9 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 GIS(1)PIVFDR;GIS(1)PIVFDR 121.9 0.00012044 291560000.0 2674.1 2854.2 2808.3 3029.5 2843.2 2786.0 2947.2 2745.1 2960.8 2634.4 2940.4 True False 2945.5726634316275 3094.73345081577 2998.888125679766 3216.6253345062987 2643.503440507518 2763.311739695357 3059.357308769721 2690.3468270107096 2836.367872459351 2468.063534410485 2578.7494407313393 1.1422484933612846 1.2000907889438444 1.162923422614209 1.2473586164284562 1.0251106209674308 1.0715704659199754 1.1863724565276417 1.0432757772107246 1.0999005283952483 0.9570776809206156 1.0 11.332455887888065 -14.999978371554707 0.03677318834404141 0.2756916338697077 1.5720420748592092 0.5447719432326035 0.059268415329762014 402.55708065114374 1.1404563370176302 34.0892829791999 11.659931967033472 1.0000498025758223e-15 14.999978371554707 1.2963504409895015 GIS(ph)PVVSEHR ddPTM_A549_MK2206_60min_R1 2 GISPVVSEHR 10 0 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 GIS(0.999)PVVS(0.001)EHR;GIS(1)PVVSEHR 95.094 0.00017353 12463400.0 918.17 885.9200000000001 1005.48 968.24 1631.24 1131.41 925.24 990.09 1343.77 1478.6799999999998 1515.1 True False 1073.1346488987344 931.0095439297332 1148.0721832894485 1205.4588434659458 1391.2867568905606 1251.1350552308256 1093.3441314994516 1130.438289523458 1039.408240559744 1144.6451610121394 1138.858855367255 0.9422894187819911 0.8174933527030482 1.008089964685942 1.0584795804895542 1.2216498561991718 1.0985865801845691 0.9600347982954165 0.9926061374470486 0.9126752061163536 1.0050807926000789 1.0 10.153373242173817 -5.777672171630781 24.918776751412846 0.9962975321756595 0.8798913830752726 0.24755730906545814 0.0860505089334918 265.3822387653161 407387.05052500096 0.013807360144110237 0.043115208660772175 1.6685062137582008e-06 5.777672171630781 -0.11640614910038694 GIS(ph)PVVSEHR ddPTM_A549_PD325901_60min_R1 1 GISPVVSEHR 10 0 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 GIS(1)PVVSEHR 66.538 0.0015444 6125200.0 738.57 705.99 785.59 745.29 700.93 917.94 936.93 689.64 765.91 949.52 1239.3 True False 813.5490826935029 765.4862549721203 838.9048615364336 791.3248706236011 651.6990948772275 910.4646009820368 972.5853838577682 675.8845891878858 733.7214662237708 889.5671451539029 1086.8739565699732 0.7485220137769732 0.7043008532359089 0.7718511023890052 0.7280741854565318 0.5996087135383218 0.8376910638795133 0.8948465256515261 0.6218610585912703 0.6750750275950086 0.8184639440264593 1.0 10.085968927166189 -10.790532144777625 0.9665595294452278 1.0049774838656451 0.7297651269818276 0.2739985823146406 0.09663987437317699 0.3259220546600312 0.5249176172528264 0.06349267793362516 0.014841274955034456 1.6198240964272475e-11 10.790532144777625 -0.2752123568838175 GIS(ph)PVVSEHRK ddPTM_A549_MK2206_60min_R1 1 GISPVVSEHRK 11 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 GIS(1)PVVSEHRK 51.211000000000006 0.0055158 2150400.0 289.08 526.72 325.83 336.78 580.95 303.18 439.85 357.6 608.84 419.86 506.3 True False 337.86963667256214 553.5277981969804 372.037593468991 419.29111511862845 495.4930245798116 335.26230636540384 519.7650514893797 408.2908951040697 470.938712117695 325.0133343945661 380.5717368308633 0.8877948727514698 1.4544637570997123 0.9775754672878793 1.1017400257049912 1.3019701060986106 0.8809437851513492 1.3657479029252713 1.0728355670971057 1.2374505685559969 0.8540133250594252 1.0 8.572024613583194 -11.020794415687549 1.3096674263429302 1.0000371195556021 1.1569679510433437 0.13969759076188248 0.18446861769019765 0.8108583047228652 2.47817915814617 0.11227612918645506 0.0253786592223642 9.532473010335343e-12 11.020794415687549 0.15693083148774156 GIS(ph)PVVSEHRK ddPTM_A549_PD325901_60min_R1 2 GISPVVSEHRK 11 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 GIS(1)PVVSEHRK;GIS(1)PVVSEHRK 54.523999999999994 0.004135100000000001 7947800.0 1065.43 1097.38 1278.05 1257.54 1539.23 1325.1599999999999 1175.19 1665.51 1149.0 1261.35 1330.87 True False 1173.5916692718886 1189.8600638554453 1364.7861585389817 1335.215389719443 1431.1197948552285 1314.3683363153973 1219.912498538643 1632.2900964826806 1100.7115257551316 1181.7081457366617 1167.18142708003 1.0054920700785097 1.019430258440756 1.1693007846717582 1.1439655898738794 1.2261331114867895 1.1261045676537098 1.0451781276116874 1.3984887512871291 0.9430509261176404 1.0124459816782498 1.0 10.188813116148483 GIS(ph)SLPR ddPTM_A549_MK2206_60min_R1 1 GISSLPR 7 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 GIS(0.787)S(0.213)LPR 88.94200000000001 0.01272 39080000.0 2599.3 2710.4 2527.1 2147.5 3466.1 2938.1 2424.1 2531.9 3760.9 3755.7 3908.0 True False 3037.998293216379 2848.3477829455805 2885.4807797179105 2673.6375964049394 2956.241281514905 3249.007791847065 2864.5275919413566 2890.804578618554 2909.0621549231964 2907.2847615530686 2937.5357446869702 1.0341996003660934 0.9696385101346592 0.982279376493304 0.9101634256674713 1.0063677648388678 1.1060317470939527 0.9751464631953292 0.9840917115126386 0.9903069810077126 0.9897019182869126 1.0 11.52039069152913 GISEDSHLESLQDVGQSAAPTFMIS(ph)PETVTGTGKK ddPTM_A549_MK2206_60min_R1 1 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGKK 35 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 GISEDSHLESLQDVGQS(0.008)AAPT(0.033)FMIS(0.699)PET(0.176)VT(0.039)GT(0.045)GKK 83.05799999999999 2.5811e-06 2770600.0 618.84 644.76 665.65 556.1 546.02 657.01 523.93 596.15 1200.9 1247.6 1179.7 True False 723.2850628146128 677.575530007376 760.0491793040351 692.3445249642781 465.7011813083202 726.5343621120583 619.1212991402311 680.6560881328056 928.8980674432356 965.7662935041692 886.7479319363415 0.8156602758973636 0.7641128956768949 0.8571197653028166 0.7807681304115864 0.5251787622344884 0.8193245633238367 0.6981931131074541 0.7675868909516318 1.0475333902553945 1.089110285710258 1.0 9.792380250301793 -8.745959246863222 9.159247003705765 1.0224849542030723 0.7507584605174495 0.6953906692127407 0.08570510409995175 0.08092092157309966 40.84991091505833 0.014069636899475615 0.01572825528432529 1.7949020481683178e-09 8.745959246863222 -0.27172649368562274 GISEDSHLESLQDVGQSAAPTFMIS(ph)PETVTGTGKK ddPTM_A549_PD325901_60min_R1 2 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGKK 35 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 GISEDSHLESLQDVGQSAAPT(0.017)FMIS(0.937)PET(0.046)VTGTGKK;GISEDSHLESLQDVGQSAAPT(0.023)FMIS(0.872)PET(0.104)VTGT(0.001)GKK 152.6 9.6942e-41 29411000.0 1513.6599999999999 1298.1100000000001 2017.87 2156.8900000000003 2033.0700000000002 2878.5 2233.2 2494.5 2616.6000000000004 2176.63 2979.7 True False 1667.325648902402 1407.5062854174416 2154.8147926380484 2290.1161966473987 1890.2741769107404 2855.058450363634 2318.18564805393 2444.7452406026064 2506.6334014716085 2039.197210334001 2613.2157898745654 0.6380359614245381 0.5386108146411446 0.8245835651947747 0.8763593904188542 0.7233517355263929 1.0925459969383842 0.8871007350545678 0.9355313288995374 0.9592140883213962 0.7803401533984619 1.0 11.351610546758888 -5.779454842259492 0.5417249906764027 0.9812477690533075 0.4220448940577953 0.5228200419400996 0.10727150425631253 0.9059917387293143 0.24692789760370606 0.015511374142836374 0.2852255646273416 1.6616714486172535e-06 5.779454842259492 -0.5592028749955122 GISEETTTGVHNLYK ddPTM_A549_PD325901_60min_R1 2 GISEETTTGVHNLYK 15 0 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ; 117.93 8.6476e-07 2674300.0 2450.0 2902.4 2740.8 3062.3 3635.3 3545.2 3574.8 3656.7 3322.6 3526.6 3861.5 False True 2698.722196405326 3146.9954339736873 2926.8071697692903 3251.4513160120955 3379.9690691041715 3516.3290666073153 3710.840970205619 3583.764249874343 3182.9626766527404 3303.929874146677 3386.5599800653204 0.7968918939251366 0.9292602087363554 0.8642419407887876 0.9601044526455962 0.9980538035646952 1.0383188507824663 1.0957552773460826 1.0582314416309906 0.9398807921279891 0.9756005780482147 1.0 11.725604832516598 -6.361289655240867 2.5784427103574563 0.993877929567449 0.8666709332301858 0.6099605700617365 0.051149241117942314 0.19736829035716694 2.5351992712556126 0.008446556059267741 0.023019062484940674 4.352215033410053e-07 6.361289655240867 -0.12720699633726318 GISHVIVDEIHER ddPTM_A549_MK2206_60min_R1 2 GISHVIVDEIHER 13 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ; 105.65 9.9177e-05 3385400.0 168.68 105.26 86.15299999999999 261.13 299.44 265.12 216.046 108.72 269.933 209.63 241.91299999999998 False True 197.14906016994527 110.61728439818907 98.37079087295206 325.10686172257095 255.39277266576946 293.174822427587 255.29876165527926 124.13139294103601 208.79360649442492 162.27443740564198 181.8393256408545 1.0841937489326625 0.6083243215313392 0.5409764390967954 1.7878798250972396 1.404496919275802 1.612274030352642 1.4039799188406161 0.6826432758896405 1.148231306724086 0.8924056269662232 1.0 7.506520428754963 -6.1829618858564155 24.999999995973837 1.168683972401734 0.730880481476363 0.2909702355453826 0.33145734774193863 124.01357122918353 39505.065563907236 0.04692647915552954 0.12415580858569424 6.56202852833126e-07 6.1829618858564155 -0.43780349092537096 GISHVIVDEIHER ddPTM_A549_PD325901_60min_R1 2 GISHVIVDEIHER 13 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ; 127.17 5.5682e-08 7824400.0 326.19 325.82 344.73 322.26 306.71000000000004 376.16999999999996 325.2 278.46000000000004 357.35 489.28000000000003 392.46 False True 359.3045686716136 353.2779948653894 368.12545082989186 342.16526829443796 285.16774769205836 373.10659623876575 337.5756639562681 272.9058968523561 342.33182221809955 458.3867772989527 344.18990800891766 1.0439137241127485 1.026404280442285 1.0695416752903577 0.9941176668247135 0.8285186202631772 1.084013759720982 0.9807831551746771 0.7928933722405519 0.9946015680658191 1.3317844789542066 1.0 8.427060986516766 -6.506406020688356 24.24938452916417 0.9748478143331034 1.042470243882076 0.0 0.13344790299166312 791.2262129352903 1164756.4555768964 0.011101559929145207 0.025169620820705067 3.115975105584294e-07 6.506406020688356 0.06762242954897268 GISQDRS(ph)PLVK ddPTM_A549_MK2206_60min_R1 2 GISQDRSPLVK 11 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 GIS(0.001)QDRS(0.999)PLVK;GIS(0.005)QDRS(0.995)PLVK 127.03 7.9393e-08 118378000.0 8296.9 8699.3 8920.0 7727.5 11319.7 8749.2 8947.5 9579.900000000001 12926.0 13492.3 13224.3 True False 9697.213880270447 9142.057212285452 10184.990129034766 9620.737846900663 9654.587125115913 9675.034536751074 10573.144931684048 10937.880162213314 9998.281638580454 10444.380059190686 9940.341337887385 0.9755413371279049 0.9196924835408528 1.0246117092795304 0.9678478353888553 0.9712530784348093 0.9733100914628455 1.063660147301456 1.1003525724538084 1.0058288039337473 1.0507063796071237 1.0 13.279079677498173 -7.579540132339439 24.999697600302824 1.0159626447462424 0.9716775383337527 0.38220254704461043 0.03872465461932169 97.15346678305798 42864.84464467185 0.0061629083336058104 0.009141070875032188 2.6330546167887853e-08 7.579540132339439 -0.04428510641248973 GISQDRS(ph)PLVK ddPTM_A549_PD325901_60min_R1 3 GISQDRSPLVK 11 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 GIS(0.001)QDRS(0.999)PLVK;GIS(0.004)QDRS(0.996)PLVK;GIS(0.004)QDRS(0.996)PLVK 115.82 5.6664e-06 216720000.0 14824.7 13162.099999999999 15454.7 15204.5 16054.599999999999 15391.2 15713.3 15930.5 16952.2 14370.7 16304.2 True False 16329.69263063267 14271.316359393964 16503.548878660786 16143.647433075113 14926.980281363243 15265.859170136098 16311.27823014768 15612.753680264514 16239.757986863475 13463.331549481003 14298.88676083932 1.1420254530132488 0.9980718497945684 1.154184179138996 1.1290142864329886 1.0439260434066866 1.0676257127894073 1.1407376324442082 1.091885958774323 1.1357358274449492 0.9415650165405415 1.0 13.803615209970257 -10.903737927412575 1.1280678614778297 0.9993966152365006 1.1010485427513501 0.4795167668537905 0.049749660835755535 0.39970174077202875 0.8945606141202257 0.03204486059230249 0.007448507976652327 1.2481364680405784e-11 10.903737927412575 0.10165192751484953 GISQTNLITT(ph)VTPEKK ddPTM_A549_PD325901_60min_R1 1 GISQTNLITTVTPEKK 16 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;A0A0J9YW26 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 GISQTNLIT(0.209)T(0.488)VT(0.303)PEKK 68.65100000000001 0.0011767000000000001 31787000.0 3451.6 2972.2 3789.0 3623.1 4647.0 4746.9 4098.2 4249.8 5376.9 4123.6 4315.5 True False 3802.003891066375 3222.6777249368083 4046.144325107943 3846.8906583428857 4320.610751279697 4708.24282022968 4254.159243621087 4165.034405096398 5150.927591673429 3863.235192262022 3784.7208582084404 1.0045665277586986 0.8514968066792423 1.06907338128584 1.016426521918944 1.141592976905813 1.2440132302011842 1.1240351410314744 1.1004865513563886 1.360979523893264 1.0207450792264632 1.0 11.885971182936718 -6.44817528405153 1.3608550564147683 1.1702374583081832 0.9403337044598933 0.3202843207248641 0.10654775649558441 0.420839357334344 1.477959325246637 0.02045100372305359 0.071926507432307 3.5630729648050107e-07 6.44817528405153 -0.22990375384828987 GISQTNLITTVT(ph)PEKK ddPTM_A549_MK2206_60min_R1 2 GISQTNLITTVTPEKK 16 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;A0A0J9YW26 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 GISQTNLIT(0.198)T(0.124)VT(0.678)PEKK;GISQTNLIT(0.019)T(0.067)VT(0.914)PEKK 59.975 0.0026747 43081000.0 4832.1 5355.5 4583.0 4296.4 6826.5 5804.8 5455.2 5558.200000000001 9099.4 7007.9 7529.9 True False 5647.640346497464 5628.072074810013 5232.938314054522 5349.0181928727225 5822.330893009866 6419.060083085615 6446.339226747446 6346.091871273605 7038.400428755918 5424.810522802075 5660.018015332247 0.9978131396753059 0.9943558588619865 0.9245444625581011 0.9450532097924306 1.0286770955919105 1.134105945545972 1.1389255668948681 1.1212140763656357 1.2435296865999037 0.9584440381827362 1.0 12.466590929696123 -7.064097004441742 3.2869845477619646 1.1212796783223338 0.9653060779914233 0.3973987013649388 0.07440307656686455 0.19563926123804515 4.164025883299528 0.01310351923670895 0.02430928405534083 8.627858135569713e-08 7.064097004441742 -0.15597360033091046 GISQTNLITTVT(ph)PEKK ddPTM_A549_PD325901_60min_R1 1 GISQTNLITTVTPEKK 16 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;A0A0J9YW26 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 GIS(0.001)QT(0.002)NLIT(0.137)T(0.26)VT(0.602)PEKK 55.336999999999996 0.007649800000000001 36892000.0 4997.5 5486.5 6229.4 5991.4 6544.5 6494.7 6521.9 6633.6 6968.7 5887.6 6481.7 True False 5504.842521034943 5948.866609873423 6652.1645444252845 6361.475170543339 6084.836897299323 6441.80931651092 6770.094473420615 6501.287644041476 6675.829773307037 5515.8559312159005 5684.491990881622 0.968396565579677 1.046508046702481 1.1702302606980337 1.119092995600601 1.0704275609957559 1.1332251548324979 1.1909761653777304 1.143688416567401 1.174393381856391 0.9703340140268951 1.0 12.472815709420125 -5.468807940686894 4.145793368811121 1.104847670046844 0.9771639315905575 0.27884430598853294 0.06717680004546708 0.24803127542540532 8.372063153190355 0.010132591293592301 0.06372683992711646 3.397754992786116e-06 5.468807940686894 -0.12768373845628644 GISS(ph)LPR ddPTM_A549_MK2206_60min_R1 3 GISSLPR 7 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 GIS(0.079)S(0.921)LPR;GIS(0.377)S(0.623)LPR;GIS(0.159)S(0.841)LPR 82.45200000000001 0.014956 28475100.0 3351.2 3012.57 2884.4300000000003 2684.6800000000003 4108.87 3479.24 2876.8199999999997 3140.35 4603.07 4224.63 4751.139999999999 True False 3916.8006310263227 3165.8969452731567 3293.4855468488518 3342.426720519866 3504.460665987177 3847.4108674674035 3399.500955838758 3585.5042294185305 3560.481994592337 3270.2831488670404 3571.300813206772 1.0967434097239535 0.886482856209026 0.922208942654578 0.9359129615067644 0.9812840892673005 1.0773135808777488 0.9518943190860054 1.0039770988092724 0.9969706224201481 0.9157120388104637 1.0 11.802233942933261 -6.99227586880338 19.497692538690913 1.0011898686057097 0.9531205560518412 0.03291283169736037 0.06170166708850156 18.32726378822006 46253.71304898343 0.007370405481815946 0.013881856401425977 1.0179445726523106e-07 6.99227586880338 -0.04806931255386848 GISS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 GISSLPR 7 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 GIS(0.049)S(0.951)LPR;GIS(0.092)S(0.908)LPR 98.93299999999999 0.011452 112853000.0 5968.200000000001 5932.2 6517.099999999999 6087.5 6719.4 6968.099999999999 6532.1 6624.2 7636.0 6560.8 7508.2 True False 6574.087270443375 6432.127313057713 6959.389596505927 6463.511049284404 6247.452524671568 6911.354103866192 6780.682640002273 6492.075134415626 7315.085474905296 6146.5499683268645 6584.738998401258 0.9983823614025599 0.9768234268084736 1.056896803076877 0.9815895589565072 0.9487775485388895 1.04960183016278 1.0297572374012984 0.9859274811031796 1.1109150228553268 0.9334538498517886 1.0 12.684910541670117 -7.821554515023988 1.341985115629938 1.0490064034661213 0.9969619199109819 0.0 0.053484085746089635 0.5552882829693129 2.0284916079808877 0.008639460253620983 0.013512742821330994 1.50815328699062e-08 7.821554515023988 -0.052044483555139354 GITVTAYS(ph)PLGSPDRPWAKPEDPSLLEDPK ddPTM_A549_MK2206_60min_R1 2 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK 30 2 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 GIT(0.001)VT(0.032)AY(0.016)S(0.913)PLGS(0.038)PDRPWAKPEDPSLLEDPK;GITVT(0.003)AYS(0.968)PLGS(0.029)PDRPWAKPEDPSLLEDPK 134.6 2.6455999999999997e-28 17591300.0 2842.0 2827.2 2435.7 2743.6000000000004 4194.7 3278.7 2776.3 2941.7 4575.5 4114.200000000001 4301.4 True False 3321.660119771071 2971.0924040524433 2781.118885346412 3415.7821231648836 3577.6651866854904 3625.649857775083 3280.7177729907153 3358.694983578419 3539.1565555720913 3184.7993625640065 3233.243667399319 1.0273460529013796 0.9189200411988315 0.8601637152771178 1.05645675814851 1.1065250734916645 1.1213661049837913 1.0146831202578626 1.0388004521416128 1.0946148572893781 0.9850168097988485 1.0 11.658766522253458 -6.286088523523388 23.926362834481804 1.053534592866293 0.9338209514246304 0.47525270980047607 0.05459501934016148 276.0802168569184 267984.38842419116 0.007885205561820707 0.018332957272906205 5.175013373774874e-07 6.286088523523388 -0.11971364144166252 GITVTAYS(ph)PLGSPDRPWAKPEDPSLLEDPK ddPTM_A549_PD325901_60min_R1 3 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK 30 2 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 GITVT(0.007)AYS(0.935)PLGS(0.058)PDRPWAKPEDPSLLEDPK;GITVT(0.001)AYS(0.57)PLGS(0.429)PDRPWAKPEDPSLLEDPK;GIT(0.006)VT(0.028)AYS(0.932)PLGS(0.034)PDRPWAKPEDPSLLEDPK 152.0 3.7476999999999997e-37 148416000.0 6672.9 6968.799999999999 6738.1 7027.300000000001 7217.9 6633.8 5636.3 6665.9 6764.9 7471.8 9144.2 True False 7350.32789567065 7556.085233005722 7195.38798548689 7461.360360843742 6710.939604403209 6579.776532229383 5850.792480801703 6532.943395202614 6480.594778573448 7000.029272854635 8019.521369859723 0.916554437188216 0.9422114967364809 0.8972340933624511 0.9303997104972183 0.8368254531530224 0.8204699792881125 0.7295687873332577 0.814630087495719 0.8081024389971551 0.8728736978198337 1.0 12.969300419355312 -3.1787882372810907 14.663629419336505 0.8850127300732281 0.8709421655731551 0.0 0.07469018140259742 0.0 0.0 0.012430490333458957 0.0 0.0006625394803169373 3.1787882372810907 -0.014070564500073046 GITVTAYSPLGS(ph)PDRPWAKPEDPSLLEDPK ddPTM_A549_MK2206_60min_R1 2 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK 30 2 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 GITVT(0.002)AYS(0.114)PLGS(0.883)PDRPWAKPEDPSLLEDPK;GITVT(0.001)AYS(0.083)PLGS(0.916)PDRPWAKPEDPSLLEDPK 160.26 1.0837999999999999e-46 133448000.0 3450.1000000000004 3897.8 3092.7999999999997 3393.2799999999997 5704.9 4551.299999999999 4157.4 4184.8 6674.799999999999 5811.6 6219.0 True False 4032.392533153475 4096.181371150118 3531.4055460850605 4224.633752330127 4865.716767235333 5032.91554509157 4912.745765742748 4778.008215412506 5162.968457465325 4498.755523668509 4674.650664331698 0.8626083150814347 0.8762540059740958 0.7554373149271296 0.9037325044553021 1.0408728088200254 1.0766399259507213 1.0509332394028397 1.022110219244711 1.1044608096300257 0.9623725593004637 1.0 12.190642841391316 -6.66244469933942 3.467462837350794 1.0504454330547612 0.8348572328721375 0.7925744532841481 0.04665437545412396 0.07161414287709562 1.683798649090845 0.006649477108677417 0.014479168586206785 2.1754810301220788e-07 6.66244469933942 -0.2155882001826237 GITVTAYSPLGS(ph)PDRPWAKPEDPSLLEDPK ddPTM_A549_PD325901_60min_R1 1 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK 30 2 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 GITVTAYS(0.001)PLGS(0.999)PDRPWAKPEDPSLLEDPK 204.97 1.3665999999999997e-78 89023000.0 5631.6 4582.8 5632.7 5897.5 5617.7 5523.3 5085.9 4327.8 7283.6 6371.8 7035.8 True False 6203.3158862352 4969.008639337998 6014.968894176698 6261.775180805709 5223.132132012898 5478.320076044277 5279.446707611264 4241.4786339065795 6977.495621401285 5969.483460581811 6170.441203610929 1.0053277685564905 0.8052922757663009 0.9748036964774498 1.0148018551965672 0.8464762825965074 0.8878327975701925 0.85560278971976 0.6873866055841316 1.130793632279985 0.9674321922212763 1.0 12.591157934410267 -8.795212325183396 24.99998937919282 1.0617636710193987 0.8872458358966265 0.3017768136343285 0.09755308550641803 133.3981071991103 98745.6551169985 0.016939755030565804 0.01803335354937476 1.602461760718166e-09 8.795212325183396 -0.1745178351227722 GITVTAYSPLGS(ph)PDRPWAKPEDPSLLEDPKIK ddPTM_A549_PD325901_60min_R1 1 GITVTAYSPLGSPDRPWAKPEDPSLLEDPKIK 32 3 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 1 GIT(0.001)VT(0.005)AY(0.002)S(0.068)PLGS(0.924)PDRPWAKPEDPSLLEDPKIK 68.092 0.00010521 16703000.0 1838.7 1621.9 1866.5 1816.1 2438.9 2252.5 1716.3 2064.7 1782.7 2259.0 2131.7 True False 2025.3634704206006 1758.5832050585445 1993.1719141762935 1928.2763723376436 2267.600077748237 2234.1563868139956 1781.6147356953961 2023.5179387741834 1707.7793185062426 2116.3663544766478 1869.5144139596637 1.0833633885340557 0.9406630897987222 1.066144181234057 1.031431669068291 1.212935327385586 1.1950463554233925 0.9529826153743878 1.0823762168745934 0.9134881794728379 1.132040672526374 1.0 10.86844787908254 -8.750706601739063 24.958056615612602 0.9591471956364686 1.0698010704658099 0.0 0.09628106795758855 210.2374171684733 488886.8221294847 0.014544152656662843 0.016409268082573553 1.7753884829560898e-09 8.750706601739063 0.1106538748293413 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK ddPTM_A549_MK2206_60min_R1 2 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK 30 2 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 157.43 2.4511e-46 22015300.0 3108.0 2923.9900000000002 3015.6 2418.14 3852.2 2805.6099999999997 3293.5 3049.9500000000003 4594.7 4201.9 4749.0 False True 3632.554416695459 3072.80860162893 3443.2574252373606 3010.58440855443 3285.5464829784823 3102.497787986806 3891.886318245474 3482.2897525801404 3554.0077862281933 3252.6878716537094 3569.692234267764 1.0176099725977048 0.8608049097709518 0.9645810336766082 0.8433736610831322 0.9204004903947784 0.8691219254713168 1.0902582247524766 0.9755154013422807 0.9956062184047674 0.9111956040436969 1.0 11.801583980419082 -7.7417186791038555 24.999997587854253 1.0021306549748974 0.9098561850646573 0.3096866906407203 0.06029719312747919 164.2356165950707 208201.60944953645 0.007301279488319979 0.01082133496039469 1.8125137959824952e-08 7.7417186791038555 -0.09227446991024013 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK ddPTM_A549_PD325901_60min_R1 2 GITVTAYSPLGSPDRPWAKPEDPSLLEDPK 30 2 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 188.17 3.0478e-67 45142000.0 8601.9 8442.4 8095.599999999999 8244.6 7906.0 8086.8 8155.5 7424.4 10394.0 9046.0 9786.7 False True 9475.158555615913 9153.870676605377 8645.016098797527 8753.850217154859 7350.709834219346 8020.943781969997 8465.862015360839 7276.314517670878 9957.176326108653 8474.834016199977 8582.997943002798 1.1039451038597115 1.0665120436231699 1.007225698550387 1.019905897133687 0.8564268432817157 0.934515403036883 0.9863525625405221 0.8477590890724632 1.1601047084283806 0.9873978850372438 1.0 13.067265937288774 -8.779074360724696 24.99944376658613 1.0756049850043854 0.9779621791824066 0.10045649695918968 0.0856244321989332 300.707608531562 426283.0049548393 0.016296230057198324 0.017367058872054263 1.663127862083719e-09 8.779074360724696 -0.09764280582197882 GIVVTAYS(ph)PLGSPDRPWAKPEDPSLLEDPR ddPTM_A549_MK2206_60min_R1 1 GIVVTAYSPLGSPDRPWAKPEDPSLLEDPR 30 2 P15121;E9PCX2 P15121 AKR1B1 Aldose reductase 1 GIVVT(0.026)AY(0.018)S(0.923)PLGS(0.027)PDRPWAKPEDPS(0.006)LLEDPR 46.54 0.0024261 3767200.0 751.2 1066.6 793.01 764.27 1116.4 1212.7 1097.0 1091.3 1539.1 1405.4 1289.9 True False 877.9841949233038 1120.8853841830557 905.4707424020022 951.5161843093838 952.1790388861376 1341.0271090748904 1296.3107002020006 1245.9951169660842 1190.4963074376585 1087.9191639073094 969.582230571066 0.9055283474060651 1.1560498417167515 0.9338772038640772 0.9813671850699639 0.9820508347449002 1.3830978609055677 1.3369786072074543 1.285084521642085 1.2278446014181574 1.1220494039649893 1.0 9.921219448711502 GIVVTAYS(ph)PLGSPDRPWAKPEDPSLLEDPR ddPTM_A549_PD325901_60min_R1 1 GIVVTAYSPLGSPDRPWAKPEDPSLLEDPR 30 2 P15121;E9PCX2 P15121 AKR1B1 Aldose reductase 1 GIVVT(0.026)AYS(0.94)PLGS(0.033)PDRPWAKPEDPSLLEDPR 83.198 8.509000000000001e-07 3693400.0 2551.4 1836.7 1956.3 2191.4 2678.5 2190.5 2174.2 2140.2 2656.5 2134.8 2536.7 True False 2810.416249758591 1991.4851548992106 2089.0662821875594 2326.7578009695017 2490.3714003233636 2172.6612942579613 2256.940370767892 2097.512032045579 2544.856543227595 2000.0083636727534 2224.7019814661926 1.263277631418471 0.8951694076285759 0.9390319690418748 1.0458739284423386 1.1194179809567488 0.9766077939239602 1.014491104682908 0.9428283201614317 1.143908965977728 0.8990005764073826 1.0 11.119396371906369 -8.76185109130907 24.999913383743415 1.067957004384289 1.0193562279142094 0.0 0.11230166805182201 30.29027282215417 1839280.3097966197 0.01745524145474807 0.01913672900342427 1.7304095715745676e-09 8.76185109130907 -0.04860077647007954 GIVVTAYSPLGS(ph)PDRPWAKPEDPSLLEDPR ddPTM_A549_MK2206_60min_R1 2 GIVVTAYSPLGSPDRPWAKPEDPSLLEDPR 30 2 P15121;E9PCX2 P15121 AKR1B1 Aldose reductase 1 GIVVT(0.004)AY(0.001)S(0.177)PLGS(0.697)PDRPWAKPEDPS(0.121)LLEDPR;GIVVT(0.002)AYS(0.164)PLGS(0.832)PDRPWAKPEDPS(0.002)LLEDPR 70.833 4.9496e-05 25835000.0 2218.4300000000003 2216.26 1952.3999999999999 1941.23 3220.8 3386.2 2668.6 2492.0 3598.2 3392.7 3223.1 True False 2592.846748593856 2329.0581675881695 2229.279678018777 2416.8314371451256 2747.024586567961 3744.5254364223556 3153.4500770820923 2845.248631429929 2783.2134451446855 2626.2867136675177 2422.715316965347 1.0702234515285984 0.9613420740268853 0.9201575036109217 0.9975713697028211 1.1338618975707133 1.545590358966602 1.3016180873582999 1.1744048553727064 1.1487992112217678 1.0840261318680895 1.0 11.242409174415515 -6.7434269181040625 5.919941029125673 1.1379543030739552 0.9793654816838969 0.2775271764672127 0.14414128885975022 0.24959956458742122 28.48125585819393 0.0246949933276429 0.05046531772105912 1.8053985191306612e-07 6.7434269181040625 -0.15858882139005825 GIVVTAYSPLGS(ph)PDRPWAKPEDPSLLEDPR ddPTM_A549_PD325901_60min_R1 2 GIVVTAYSPLGSPDRPWAKPEDPSLLEDPR 30 2 P15121;E9PCX2 P15121 AKR1B1 Aldose reductase 1 GIVVTAYS(0.046)PLGS(0.954)PDRPWAKPEDPSLLEDPR;GIVVTAYS(0.081)PLGS(0.919)PDRPWAKPEDPSLLEDPR 174.72 3.7494e-58 37324000.0 5267.1 5244.9 5143.9 5443.0 5404.0 5701.9 5163.4 5251.5 6344.0 5914.200000000001 6078.2 True False 5801.812114565916 5686.906129978153 5492.995986783515 5779.2017480501045 5024.441682787926 5655.465616858923 5359.896012520897 5146.754712777949 6077.383741854273 5540.776402676313 5330.619932884381 1.088393505373506 1.0668376664589905 1.0304610075269938 1.0841519036835547 0.9425623559827152 1.0609395695180932 1.0054920590860197 0.9655077228499869 1.1400894864710078 1.0394243957434455 1.0 12.380087607907258 -8.752755845696743 24.999513698391578 1.066153370747984 1.0307827454137681 0.05251106040462539 0.053612510069505105 447.7958177207034 1289182.2281430864 0.010872428677368599 0.012236566546928273 1.7670309416619701e-09 8.752755845696743 -0.035370625334215866 GIVVTAYSPLGSPDRPWAKPEDPSLLEDPR ddPTM_A549_PD325901_60min_R1 2 GIVVTAYSPLGSPDRPWAKPEDPSLLEDPR 30 2 P15121;E9PCX2 P15121 AKR1B1 Aldose reductase 0 ; 82.476 1.6574e-06 7111300.0 3857.9 4163.4 3787.0 4249.5 4221.2 4612.299999999999 4558.1 4172.5 5092.7 4435.8 3805.3999999999996 False True 4249.551167964125 4514.264329453568 4044.0085930809646 4511.981963685267 3924.7174743494415 4574.7389580031895 4731.560989788027 4089.2762142370707 4878.6715293413035 4155.722830981638 3337.359924418121 1.2733272000037716 1.3526453339433098 1.21173882489946 1.3519614503287192 1.1759946674117652 1.3707658333557804 1.4177556802216917 1.225302726360882 1.4618355945506583 1.2452126606350982 1.0 11.704491569975163 -10.957307566972617 1.1990613812180055 0.9985534831124986 1.3265750671084766 0.218451697555488 0.10953115519024724 0.23368335346169034 0.5929498397281866 0.06343894459635215 0.014472824718980837 1.1032969891959139e-11 10.957307566972617 0.328021583995978 GIYAYGFEKPSAIQQR ddPTM_A549_MK2206_60min_R1 1 GIYAYGFEKPSAIQQR 16 1 I3L3H2;P38919;J3QQP0;E9PBH4;F8WE11;P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;Q14240-2;Q14240;E7EQG2;J3QR64;J3KS25;J3QLN6;J3QKZ9;J3KS93;J3KSN7;E7EMV8;J3KT04 I3L3H2;P60842 EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 114.29 1.9425e-07 7032700.0 2657.5 4115.7 3741.5 3469.6 5431.5 4681.9 3327.4 4007.4 5639.7 4846.0 5513.1 False True 3106.021030362992 4325.1715504239655 4272.100960513857 4319.652155756264 4632.533545064544 5177.335550406307 3931.945509436769 4575.461222147793 4362.316954750288 3751.28523430683 4144.045116180589 0.749514289367992 1.0437076405216155 1.0309011704127615 1.042375754764351 1.117877198531607 1.249343432626058 0.9488182196869266 1.1041050697741497 1.0526712022794944 0.9052230680741837 1.0 12.016823994379529 -5.261208173847171 6.913123366558023 1.0478491596607133 0.744844626141789 0.5010818430703375 0.08604865014706872 0.061863003737671916 21.40301592594872 0.010232644496769461 0.08688937173443462 5.48014217915894e-06 5.261208173847171 -0.3030045335189243 GIYAYGFEKPSAIQQR ddPTM_A549_PD325901_60min_R1 1 GIYAYGFEKPSAIQQR 16 1 I3L3H2;P38919;J3QQP0;E9PBH4;F8WE11;P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;Q14240-2;Q14240;E7EQG2;J3QR64;J3KS25;J3QLN6;J3QKZ9;J3KS93;J3KSN7;E7EMV8;J3KT04 I3L3H2;P60842 EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 107.34 7.3611e-07 13746000.0 7379.6 6195.9 7024.4 8249.5 8801.8 8897.3 7735.6 8846.5 8294.9 8203.5 8698.6 False True 8128.771559425609 6718.050237512939 7501.11802514865 8759.05287902615 8183.591932561569 8824.843338690416 8029.982491082747 8670.049617555005 7946.294199291765 7685.52960998193 7628.727344968588 1.0655475273718908 0.8806252909200809 0.9832725284245346 1.1481669855199441 1.0727335717351247 1.156791026816643 1.052597914169629 1.1365001297723931 1.0416277630544266 1.0074458376141604 1.0 12.897226685595687 -4.916399651805237 21.579856622411903 1.038448443228408 2.7916082555480664 0.0 0.07829722960850331 4116.3077873018865 1626918.184037574 0.010800078204269453 187517.81170967204 1.2122727644734583e-05 4.916399651805237 1.7531598123196583 GIYVT(ph)RVSEGGPAEIAGLQIGDK ddPTM_A549_MK2206_60min_R1 2 GIYVTRVSEGGPAEIAGLQIGDK 23 1 O14907 O14907 TAX1BP3 Tax1-binding protein 3 1 GIYVT(0.552)RVS(0.448)EGGPAEIAGLQIGDK;GIYVT(0.5)RVS(0.5)EGGPAEIAGLQIGDK 108.17 8.3587e-11 3806500.0 2748.3 2624.3 2838.8 3126.0 4253.9 3339.2 2714.3 2870.5 4516.6 3758.2 3332.8 True False 3212.1458505161277 2757.865660708416 3241.3845267156858 3891.8701403314703 3628.1569451072546 3692.5519276184314 3207.4531755317125 3277.402165537564 3493.597311528121 2909.220009816742 2505.173779399371 1.2822048022897066 1.1008680050010857 1.2938761188426717 1.5535330013172048 1.4482655754033658 1.4739703720289379 1.280331608891706 1.3082534203768246 1.3945528810243772 1.1612847115597078 1.0 11.29069496871403 -10.753852324498302 0.7984846524122816 0.9779639753572935 1.352601338363812 0.3886401896454297 0.12366699472487551 0.48297968738765074 0.493654965920853 0.11622079018381945 0.023575355830352418 1.7625752825318595e-11 10.753852324498302 0.3746373630065185 GKAES(ph)SEDETSSPAPSK ddPTM_A549_PD325901_60min_R1 1 GKAESSEDETSSPAPSK 17 1 I3L1U0;A0A0J9YWQ1;Q96NA2-2;Q96NA2 I3L1U0 RILP Rab-interacting lysosomal protein 1 GKAES(0.499)S(0.499)EDET(0.001)SSPAPSK 55.588 0.0030126 4659100.0 1133.0 1140.4 946.1 822.81 1290.6 1405.7 917.8 920.05 1194.5 1198.8 1833.7 True False 1248.021325929483 1236.505510234148 1010.3080353614729 873.6331049629076 1199.9527083282924 1394.25244525835 952.7273812394307 901.6988809847375 1144.2993189856445 1123.1075634115118 1608.166524782023 0.7760522972573655 0.7688914619098595 0.6282359567821584 0.5432479108973638 0.746161973798664 0.8669826313213006 0.5924308002671346 0.5606999443710949 0.7115552409230426 0.6983776531250344 1.0 10.651201089212627 -10.387569704951007 0.7845095593333509 0.9981711103829181 0.6858482259910076 0.025534879674285804 0.12905356278025043 0.36470004175886156 0.41286198597811136 0.06457807262965641 0.020089813977310855 4.096663524393128e-11 10.387569704951007 -0.31232288439191047 GKAS(ph)PFEEDQNR ddPTM_A549_MK2206_60min_R1 4 GKASPFEEDQNR 12 1 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 1 GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR 189.09 1.4182e-19 1242053000.0 19611.6 20912.5 20298.3 19451.699999999997 27622.8 20436.6 21670.5 20925.5 29402.399999999998 29352.7 31477.800000000003 True False 22921.558622414625 21976.856925490487 23176.904163249597 24217.367373219993 23559.522711701888 22599.187447282842 25607.749342504514 23891.75370665609 22742.803345984677 22721.90468366448 23660.993516915965 0.968748780816296 0.9288222368929082 0.9795406159373538 1.0235143911394193 0.9957114731830033 0.9551241976008317 1.0822770110729607 1.0097527683939032 0.961193929989675 0.960310676194552 1.0 14.53022303276369 -5.939908831718108 6.913595336464227 0.9921728897664419 0.9494667941601526 0.21360649349534988 0.03520400017756514 0.26953151022725563 24.776523762212417 0.004883163607315005 0.015370512197680748 1.1483946703358672e-06 5.939908831718108 -0.04270609560628935 GKAS(ph)PFEEDQNR ddPTM_A549_PD325901_60min_R1 4 GKASPFEEDQNR 12 1 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 1 GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR 171.08 9.128e-16 1887638000.0 49423.0 47046.4 49586.0 53106.0 62774.0 63518.0 55556.0 55929.0 68076.0 53947.0 59394.0 True False 54440.386576710356 51011.16523735514 52951.20414484093 56386.23700752318 58364.97079854351 63000.73046732581 57670.21398140967 54813.4522195483 65215.00246066696 50540.77721334739 52088.914529586895 1.0451434257818486 0.9793094307691979 1.0165541866833152 1.0824997509881948 1.120487369061833 1.2094844178705417 1.1071494674486364 1.052305518641857 1.2519938848720749 0.9702789484054203 1.0 15.668688752919525 -6.404958115628027 2.6682966987191987 1.122353990252058 1.0087836157682997 0.15938777070162724 0.07970544703089197 0.34091603732426107 4.679313695707256 0.013416916628649052 0.03521262605930118 3.9358803217252423e-07 6.404958115628027 -0.1135703744837584 GKDLGTQNHTSELILS(ph)SPPGQK ddPTM_A549_PD325901_60min_R1 1 GKDLGTQNHTSELILSSPPGQK 22 1 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 GKDLGTQNHTSELILS(0.5)S(0.5)PPGQK 95.958 3.2778e-07 6042600.0 1548.4 1084.3 1258.6 1088.3 1616.6 1442.8 1582.3 1768.1 1744.1 1860.3 2028.4 True False 1705.5924281281673 1175.6777663511814 1344.0161645766316 1155.5218192913696 1503.055592967239 1431.0503151588161 1642.5152923677836 1732.8338584523833 1670.801542271127 1742.8403405192162 1778.9196590870126 0.9587799085898692 0.6608942457550722 0.7555238134061745 0.6495638031705228 0.844926068071363 0.8044490979953912 0.9233217947632131 0.9740933771802366 0.9392225971175254 0.9797184103377028 1.0 10.796785640655548 -7.7020119761940595 1.3932228296639058 0.9724582424994651 0.755320372077821 0.5743706906540844 0.07991806237004642 0.19394228368788632 0.7643405640460532 0.012558155705816315 0.020566472129053135 1.9860401491501223e-08 7.7020119761940595 -0.21713787042164412 GKDLGTQNHTSELILSS(ph)PPGQK ddPTM_A549_PD325901_60min_R1 1 GKDLGTQNHTSELILSSPPGQK 22 1 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 GKDLGTQNHTSELILS(0.169)S(0.831)PPGQK 93.76700000000001 4.9573e-07 5817000.0 1523.1 1396.6 1531.9 2198.2 2082.2 1633.5 1574.1 1617.5 1889.7 1945.1 1984.7 True False 1677.723990753042 1514.2963833681256 1635.8639460630388 2333.9778215255815 1935.9534552000387 1620.1973175851986 1634.0032368805698 1585.2376935957968 1810.2824806087672 1822.2860540471581 1740.5944820498878 0.9638798744077348 0.869988040858746 0.9398305940488169 1.34090843421316 1.1122369254670266 0.9308298597368307 0.938761586188768 0.9107449839372533 1.0400368950249734 1.0469331443019758 1.0 10.765364412475614 -6.021183057838594 24.993297341762034 1.0274900269273992 0.9139276950367825 0.16556031153211936 0.11360839347358337 1057.418710520663 1247621.5557162156 0.016140187919028562 0.04320168331971761 9.523946391138261e-07 6.021183057838594 -0.11356233189061671 GKDS(ph)LSDDGVDLK ddPTM_A549_MK2206_60min_R1 2 GKDSLSDDGVDLK 13 1 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 GKDS(0.587)LS(0.413)DDGVDLK;GKDS(0.96)LS(0.04)DDGVDLK 123.55 1.5773e-06 49536000.0 7889.3 9825.1 8387.2 8117.900000000001 10304.8 8941.1 7404.0 10071.8 11654.9 12929.0 12112.8 True False 9220.820965133684 10325.155623604867 9576.631077381215 10106.78586442638 8788.977570686018 9887.241267378158 8749.210961071656 11499.508493593874 9015.083759050854 10008.32992041953 9104.857463726803 1.0127364433621144 1.1340271569038458 1.051815595744791 1.1100432823568296 0.965306442819206 1.0859303736240051 0.9609388171015284 1.263008074470931 0.9901400208587997 1.099229719992005 1.0 13.152420716692966 GKDS(ph)LSDDGVDLK ddPTM_A549_PD325901_60min_R1 2 GKDSLSDDGVDLK 13 1 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 GKDS(0.728)LS(0.272)DDGVDLK;GKDS(0.939)LS(0.061)DDGVDLK 148.52 3.2533000000000004e-13 105064000.0 24389.0 25617.0 25318.0 24401.0 30873.0 27175.0 25788.0 28475.0 27852.0 28070.0 30770.0 True False 26864.953325767146 27775.834492869308 27036.231729501935 25908.194351308215 28704.586986068014 26953.695809842535 26769.376451735072 27907.04378679464 26681.477297939004 26297.655409543833 26985.48506710084 0.9955334602645095 1.0292879458643498 1.001880516962171 0.960078882661776 1.0637046884535348 0.9988219868133088 0.9919916720107717 1.0341501632230177 0.9887343967171276 0.9745111249308033 1.0 14.719895999697181 GKDS(ph)TEMR ddPTM_A549_MK2206_60min_R1 1 GKDSTEMR 8 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 GKDS(0.97)T(0.03)EMR 47.559 0.030986 5770800.0 2297.1 2062.9 1669.5 1782.1 1739.7 1076.6 1388.2 1294.8 2441.6 3240.7 3235.3 True False 2684.79432129702 2167.892798641691 1906.2602040833585 2218.7145800015087 1483.7924345666545 1190.5250974107587 1640.4179708481465 1478.341865158696 1888.5814984340132 2508.6236192361007 2431.8857202624754 1.1039969102689775 0.8914451779451662 0.7838609307174247 0.9123432739931715 0.6101406913177267 0.4895481261686361 0.6745456651931386 0.6078993979203666 0.7765913844957225 1.031554895172189 1.0 11.24785971957666 -5.282147480347139 2.2802109467252825 0.8082511988265777 1.170702165280493 0.2396105159043146 0.16467235479649003 0.7927368963342328 4.922769917484018 0.02623711151123635 0.5622675617123157 5.22218820658984e-06 5.282147480347139 0.3624509664539153 GKDS(ph)TEMR ddPTM_A549_PD325901_60min_R1 1 GKDSTEMR 8 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 GKDS(0.722)T(0.278)EMR 41.70399999999999 0.019651 203320000.0 2920.1 2782.8 2997.8 2309.2 3210.0 2377.5 2359.3 2279.0 2768.1 2870.4 2955.9 True False 3216.546402335999 3017.3163222374483 3201.248735235838 2451.834039426291 2984.540673898823 2358.138428257612 2449.0844525584985 2233.5435571590856 2651.76638332705 2689.162454134472 2592.3430389939354 1.2407873317507823 1.1639340460930823 1.2348862349938894 0.945798454350326 1.1512907933114809 0.9096552395985309 0.9447377973205914 0.861592591552198 1.0229226392646615 1.0373482265595957 1.0 11.340040924145962 -6.257746349390906 24.987206710518944 0.9949840805164748 1.2082757003977247 0.6511288251641554 0.07433448067570814 152.5305370299894 1032023.2312522001 0.010044754219827076 0.025504321992547888 5.523999754545849e-07 6.257746349390906 0.2132916198812499 GKDS(ph)YETSQLDDQS(ph)AETHSHK ddPTM_A549_MK2206_60min_R1 1 GKDSYETSQLDDQSAETHSHK 21 1 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 2 GKDS(0.969)YET(0.012)S(0.019)QLDDQS(0.967)AET(0.032)HS(0.001)HK 127.14 7.041500000000001e-17 16544000.0 2085.8 2246.3 2328.7 2319.5 2692.6 1830.1 2183.8 2558.7 3537.7 3521.8 3386.6 True False 2437.832047086031 2360.627075276953 2658.944676399471 2887.7776041263123 2296.5221068656506 2023.7599672779374 2580.5681924349406 2921.403560690111 2736.416598546038 2726.2229340036743 2545.6137545949073 0.9576598345627543 0.9273312068714085 1.044520077564791 1.134413105253611 0.9021486872155531 0.7949988342202314 1.0137312417396156 1.1476224762758656 1.0749535720439622 1.0709491685778183 1.0 11.313797820710912 -7.992246291417516 24.996686237556617 1.0465091844319145 0.9625149430555281 0.2514772559905033 0.0868825838927713 274.30255237526944 884302.5207199756 0.01458311396049793 0.020127702466579446 1.018013901566079e-08 7.992246291417516 -0.08399424137638645 GKDS(ph)YETSQLDDQS(ph)AETHSHK ddPTM_A549_PD325901_60min_R1 1 GKDSYETSQLDDQSAETHSHK 21 1 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 2 GKDS(0.847)YET(0.12)S(0.033)QLDDQS(0.978)AET(0.021)HSHK 153.25 2.947e-22 23187000.0 5166.8 5260.9 5336.1 5640.8 6556.0 6152.0 6209.9 6381.5 6531.9 6379.6 7685.7 True False 5691.329732402872 5704.254506130154 5698.239834576005 5989.219404813713 6095.529176972172 6101.9001516891 6446.2211426876665 6254.215976310095 6257.386958294121 5976.790967250651 6740.4076236664605 0.844359874085339 0.8462773803325728 0.8453850497956137 0.8885544820441976 0.9043264914083184 0.9052716827190872 0.9563547937448372 0.9278691031015273 0.9283395467543549 0.8867106117240372 1.0 12.718620125158232 -2.0000000000010036 0.08773023884155169 1.0689781539451613 0.4117605723842493 0.43823230993206086 0.034989811313851524 27.885997480841556 0.17127345787505152 0.16983152019258113 2.212977802854829 0.00999999999997689 2.0000000000010036 -0.657217581560912 GKDSLS(ph)DDGVDLK ddPTM_A549_MK2206_60min_R1 4 GKDSLSDDGVDLK 13 1 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 GKDS(0.015)LS(0.985)DDGVDLK;GKDS(0.034)LS(0.966)DDGVDLK;GKDS(0.01)LS(0.99)DDGVDLK;GKDS(0.004)LS(0.996)DDGVDLK 169.58 3.4957999999999994e-22 415855000.0 52331.3 52333.5 50379.7 46114.1 68457.3 51695.2 47886.7 51496.4 71796.0 72255.6 71558.40000000001 True False 61163.54406255306 54997.05161554841 57524.29901387141 57412.0565701406 58387.321854837006 57165.551751503466 56587.09353451514 58796.17240111081 55534.32063465278 55933.0097763064 53788.47436863057 1.1371124535598212 1.0224690746689533 1.0694539990042844 1.0673672611845504 1.0854987530356222 1.0627844054421147 1.0520300900654793 1.0930998339562634 1.0324576275217874 1.039869794279321 1.0 15.71500944912339 -9.238713257576013 0.9367493294692493 1.0065969395692138 1.0719433431748782 0.31425401725885693 0.029625879054348336 0.269858678500215 0.500207689392468 0.00690379433157037 0.005631370504069537 5.77147398517614e-10 9.238713257576013 0.06534640360566435 GKDSLS(ph)DDGVDLK ddPTM_A549_PD325901_60min_R1 4 GKDSLSDDGVDLK 13 1 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 GKDS(0.001)LS(0.999)DDGVDLK;GKDS(0.063)LS(0.937)DDGVDLK;GKDS(0.207)LS(0.793)DDGVDLK;GKDS(0.014)LS(0.986)DDGVDLK 180.62 2.4671999999999998e-23 719496000.0 53430.8 53719.8 57275.600000000006 55704.600000000006 68287.3 57073.7 58140.9 60089.7 61398.7 64393.2 66865.4 True False 58855.05548232399 58246.95607565448 61162.66664216217 59145.34662767441 63491.03562639593 56608.910709924916 60353.48376542126 58891.1637940423 58818.32615873071 60327.40236258772 58641.3796946937 1.003643771492805 0.9932739710236574 1.0429950141111126 1.0085940497240093 1.0827002358565083 0.9653407031800669 1.029196176482227 1.0042595194834953 1.0030174335078448 1.028751415411302 1.0 15.839631426665047 GKDSLYAQGK ddPTM_A549_PD325901_60min_R1 1 GKDSLYAQGK 10 1 H0Y5B4;H7BZ11;J3KQN4;P83881;H7BY91;H0Y3V9 H0Y5B4 RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a 0 104.79 0.00033984 5201000.0 2975.6 3571.8 2867.8 4458.6 3863.5 3332.0 3518.0 3719.8 3941.4 3734.8 4085.8 False True 3277.680721479056 3872.8081212331886 3062.426153482333 4733.997595784717 3592.1410883514327 3304.8652967210805 3651.879415123466 3645.6056708733527 3775.7566645877087 3498.9840906150444 3583.2725020201706 0.9147171250947762 1.0808020096294055 0.8546450630689696 1.3211380360036233 1.0024749963409878 0.922303646975738 1.019146440318066 1.017395598246586 1.0537174224006183 0.9764772533047358 1.0 11.80706204698384 -11.231501916546526 1.7140439404760883 1.0000097834334973 1.0278583171134439 0.006332828003446034 0.11476357526267372 2.553789697737167 13.544311195352092 0.07821346643211813 0.01614376072035605 5.868107800103619e-12 11.231501916546526 0.027848533679946552 GKDST(ph)EMR ddPTM_A549_MK2206_60min_R1 2 GKDSTEMR 8 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 GKDS(0.367)T(0.633)EMR;GKDS(0.367)T(0.633)EMR 76.143 0.0018644000000000002 84533000.0 9659.099999999999 9998.6 7769.7 7388.0 8236.0 5948.4 6063.4 5577.200000000001 8150.0 14254.4 15022.4 True False 11289.319937677961 10507.486032526449 8871.560292103304 9198.060331659928 7024.495310163227 6577.855739771643 7165.041294079131 6367.785179458666 6304.038012875655 11034.321139889247 11291.92348285199 0.9997694329776515 0.9305311046858585 0.7856553673584249 0.8145698423858593 0.6220813770860815 0.5825274807928721 0.6345279708067473 0.563923869049311 0.5582784919193812 0.9771870272275632 1.0 13.463003637388411 -5.717761161333913 1.5943228573516723 0.7335427015511081 1.0155210463677602 0.2908181228903036 0.14790082963596393 0.6758076717332817 2.7697030713573345 0.02716719859929534 0.2260134113712625 1.915308952611959e-06 5.717761161333913 0.28197834481665207 GKDST(ph)EMR ddPTM_A549_PD325901_60min_R1 1 GKDSTEMR 8 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 GKDS(0.393)T(0.607)EMR 56.358999999999995 0.005370499999999999 202230000.0 7513.9 6708.3 6898.6 7137.5 7724.3 6154.8 5622.9 6325.2 6323.6 7087.5 6711.4 True False 8276.70559655918 7273.631983780901 7366.780480651796 7578.367164561384 7181.771815388368 6104.677349417436 5836.882536468944 6199.038923976592 6057.841082911362 6639.994040439682 5885.940347069895 1.406182378433285 1.235763795567826 1.2515893886554736 1.2875372018226454 1.220157084834126 1.037162626436816 0.9916652552169726 1.053194317041042 1.0292053139694222 1.1281109982273547 1.0 12.523057205563816 -7.182242290549076 2.624288058303312 1.015557722561082 1.2873416215468616 0.8262992248654066 0.055045140851329354 0.060025199040064134 0.8086844979815467 0.006249694535831119 0.01140574061015717 6.572910359228377e-08 7.182242290549076 0.2717838989857797 GKDSYETSQLDDQS(ph)AETHSHK ddPTM_A549_MK2206_60min_R1 2 GKDSYETSQLDDQSAETHSHK 21 1 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 GKDSYETSQLDDQS(1)AETHSHK;GKDSYETSQLDDQS(0.999)AET(0.001)HSHK 203.82 3.0998999999999996e-56 28531000.0 6850.3 7919.5 7629.2 6673.4 8827.9 6686.5 6798.1 6977.4 11149.3 12164.099999999999 12737.6 True False 8006.463166244815 8322.56872308055 8711.13527942064 8308.38329958031 7529.327604248412 7394.060991860523 8033.226773968289 7966.467817391327 8624.001351773557 9416.221361665652 9574.50238012405 0.8362276020595737 0.8692429530706035 0.9098264258103173 0.8677613697008307 0.7863936218637047 0.7722658262856607 0.8390229021870282 0.8320503250308986 0.9007258037426925 0.983468486175639 1.0 13.22498179181632 -9.593109675487907 0.8113503863901604 0.9860357805829307 0.8392930290120785 0.694284768022513 0.03813513021725244 0.2380082190943019 0.3336667106784753 0.01517881598874053 0.009445445205956355 2.5520567321584287e-10 9.593109675487907 -0.14674275157085226 GKDSYETSQLDDQS(ph)AETHSHK ddPTM_A549_PD325901_60min_R1 3 GKDSYETSQLDDQSAETHSHK 21 1 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 GKDSYETSQLDDQS(0.995)AET(0.005)HSHK;GKDSYETSQLDDQS(0.994)AET(0.005)HSHK;GKDSYETSQLDDQS(1)AETHSHK 240.75 1.7761999999999997e-86 117614000.0 8763.0 8695.0 10067.2 10547.099999999999 12682.8 13332.8 12019.0 12542.2 12889.900000000001 13278.199999999999 14105.3 True False 9652.61330902036 9427.758165105159 10750.420730991462 11198.570412797948 11792.003881284729 13224.22209727575 12476.38962204916 12292.03598183444 12348.182328834699 12439.812185928216 12370.437520863747 0.7802968401675725 0.7621200260059097 0.8690412697901756 0.90526874202393 0.9532406482306351 1.069018139008586 1.0085649437222182 0.9936621854403229 0.9982009373563778 1.0056081011643658 1.0 13.594608906380943 -6.272667781119918 1.1988968328475909 1.003549803823923 0.7624066574061743 0.9191259303208278 0.02698977123508724 0.10113884245741808 0.25668934955486106 0.004043440828960589 0.018972495920242922 5.337430326292654e-07 6.272667781119918 -0.2411431464177487 GKEAEGS(ph)LTEASLPEAQVASGAGAGAPR ddPTM_A549_PD325901_60min_R1 1 GKEAEGSLTEASLPEAQVASGAGAGAPR 28 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 GKEAEGS(0.854)LT(0.124)EAS(0.021)LPEAQVASGAGAGAPR 40.864000000000004 0.007888 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GKEDALVTK ddPTM_A549_MK2206_60min_R1 1 GKEDALVTK 9 1 M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087;M0R2U2;M0R1H0;M0R2B0 M0R0P1 FBL rRNA 2-O-methyltransferase fibrillarin 0 74.16199999999999 0.002198 2700200.0 2193.5 2600.5 2835.0 2299.6 3024.9 2560.9 2335.7 2189.6 3544.0 2982.0 3399.5 False True 2563.7091740738365 2732.854342366434 3237.045629575514 2863.0021032329655 2579.941217060801 2831.8927382121587 2760.0664562094908 2499.982505368767 2741.2896586050692 2308.364128911056 2555.310328573018 1.0032868201591423 1.069480411755923 1.2667915882386005 1.1204126838213715 1.009639098708429 1.1082382857950543 1.0801296521001487 0.9783479045243212 1.07278150444291 0.9033596049369603 1.0 11.319282793948778 -7.666218633899934 0.8442241797579263 1.0297665655655923 1.1115198275169458 0.22361164986711046 0.0795896020048873 0.7597562485833333 1.0899237510485176 0.013922493527457162 0.02648205512041165 2.1566584240242708e-08 7.666218633899934 0.08175326195135346 GKEDALVTK ddPTM_A549_PD325901_60min_R1 2 GKEDALVTK 9 1 M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087;M0R2U2;M0R1H0;M0R2B0 M0R0P1 FBL rRNA 2-O-methyltransferase fibrillarin 0 ; 69.34899999999999 0.004093 5671500.0 4677.6 4887.8 4380.5 4657.299999999999 5687.5 4395.0 5135.0 5082.6 4907.5 4844.9 5043.7 False True 5152.466508532878 5299.712059735595 4677.787072086392 4944.970843504274 5288.029620809829 4359.208577157606 5330.415234979815 4981.223555777433 4701.254841290955 4538.992187164191 4423.356874648573 1.1648317453341885 1.1981199369441895 1.0575197083681007 1.1179226509724343 1.1954788570456352 0.9854978245461907 1.2050610850618528 1.1261183976192701 1.0628251290858055 1.0261419812582508 1.0 12.110925927648315 -9.413163302001694 0.3856046621888024 0.9867137301821018 1.1455367988943173 0.33808701308044475 0.06330473078295644 0.8580431083772043 0.3081472409831603 0.052525145757956145 0.027147240674211953 3.862217239077321e-10 9.413163302001694 0.1588230687122154 GKEDISQNKDES(ph)SLSMSK ddPTM_A549_MK2206_60min_R1 1 GKEDISQNKDESSLSMSK 18 2 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VUA7;F8VVE7;F8VZ43;F8VVD3 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 GKEDIS(0.002)QNKDES(0.36)S(0.314)LS(0.298)MS(0.026)K 43.198 0.025293 4779500.0 1145.5 1163.7 1182.6 1135.3 1427.4 1199.7 1001.8 1045.3 1705.3 1516.5 1823.7 True False 1338.83239521385 1222.9273594354227 1350.3104626229288 1413.4485509655537 1217.4313508653458 1326.6514577035916 1183.81409249076 1193.4744760969913 1319.052272804522 1173.9215967450084 1370.8249584405396 0.9766618173752216 0.8921105148440204 0.9850349268217671 1.0310933881547526 0.888101243976696 0.9677759728074983 0.863577866161319 0.8706249975596422 0.9622324605944478 0.8563614118030577 1.0 10.42082864884118 -9.372143021100296 1.919027313814402 0.9884286931588173 0.9352780033046855 0.0 0.06461298380262337 0.3958505072961026 2.9784536648883004 0.011129673983540736 0.009649192196181124 4.2447975199567863e-10 9.372143021100296 -0.05315068985413185 GKEDISQNKDES(ph)SLSMSK ddPTM_A549_PD325901_60min_R1 1 GKEDISQNKDESSLSMSK 18 2 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VUA7;F8VVE7;F8VZ43;F8VVD3 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 GKEDIS(0.054)QNKDES(0.337)S(0.295)LS(0.26)MS(0.055)K 42.611999999999995 0.028204000000000003 8231600.0 1573.5 1449.9 1476.4 1477.5 2264.3 1891.2 1553.6 1693.0 1546.4 2059.1 1725.8 True False 1733.2405616505232 1572.0881614244927 1576.5973823144266 1568.7618193540386 2105.2633794109356 1875.7986942253613 1612.7230981625405 1659.2317868671935 1481.4101857508579 1929.0880745917966 1513.5375407475665 1.1451586201122181 1.0386846173950908 1.0416638767583615 1.0364868905591835 1.3909555083589826 1.2393473195906768 1.065532274386788 1.0962607416051706 0.9787733345676776 1.2745558155359538 1.0 10.563708743890063 -8.515818079056722 2.0054029165664726 0.9896199518436288 1.1407303562112374 0.0 0.13166920745496896 0.30989347123571886 2.453170633012566 0.018997206743874166 0.022361072962277996 3.0491719850829933e-09 8.515818079056722 0.1511104043676086 GKEDISQNKDESS(ph)LSMSK ddPTM_A549_PD325901_60min_R1 1 GKEDISQNKDESSLSMSK 18 2 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VUA7;F8VVE7;F8VZ43;F8VVD3 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 GKEDISQNKDES(0.066)S(0.554)LS(0.338)MS(0.042)K 60.765 0.0012442 7653200.0 1756.0 1806.1 1713.0 1806.7 1890.7 2195.6 1938.5 1841.8 2243.9 2196.4 1974.8 True False 1934.2678273011236 1958.3063855085013 1829.254481105808 1918.2957556865924 1757.9037545609042 2177.719761548859 2012.2706782879031 1805.063854135852 2149.5966863724457 2057.7189291600307 1731.912119288618 1.116839478030573 1.130719257460289 1.0562051392406524 1.1076172597455647 1.0150074792957522 1.257407773347851 1.1618780513611986 1.0422375558393118 1.2411696081065542 1.1881197124512517 1.0 10.75815001133001 -3.353241505446728 1.9106666257988447 1.1141240117482059 8.470764143324491 0.0 0.08318212417252072 80980.70176877792 257.7929607978462 0.013646393743297363 2612149.956429227 0.00044336202757817037 3.353241505446728 7.356640131576285 GKEEKMS(ph)K ddPTM_A549_MK2206_60min_R1 1 GKEEKMSK 8 2 H0YGF2;H0YFF0;Q9HA77 H0YGF2 CARS2 Probable cysteine--tRNA ligase, mitochondrial 1 GKEEKMS(1)K 57.281000000000006 0.008905 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GKEELAEAEIIKDSPDS(ph)PEPPNK ddPTM_A549_MK2206_60min_R1 2 GKEELAEAEIIKDSPDSPEPPNK 23 2 H0YH12;Q9NVM9-2;Q9NVM9 H0YH12 ASUN Protein asunder homolog 1 GKEELAEAEIIKDS(0.051)PDS(0.949)PEPPNK;GKEELAEAEIIKDS(0.05)PDS(0.95)PEPPNK 81.242 1.0966e-05 17018700.0 4753.9 4703.0 4493.0 4400.3 6569.9 4974.6 4469.7 4965.4 6582.4 6152.5 6717.9 True False 5556.242098303901 4942.362611862848 5130.1749607346665 5478.373697536972 5603.476413093906 5501.008870127771 5281.786633266069 5669.260655899743 5091.496909932849 4762.645976903174 5049.660025392172 1.1003200354804847 0.9787515569385304 1.0159446249723 1.0848995120441804 1.1096739948663616 1.0893820262088922 1.0459687596207763 1.122701454630988 1.0082850893585509 0.943161708502008 1.0 12.301970544567817 -8.927543563069673 15.061151742676174 1.0036540644408887 1.0655912627904187 0.4021740078394883 0.04412112129624745 1.3783632256085154 285.16169129501156 0.007131068323889089 0.00759011371632922 1.181561786884852e-09 8.927543563069673 0.06193719834953004 GKEKDS(ph)PFKPK ddPTM_A549_PD325901_60min_R1 1 GKEKDSPFKPK 11 3 Q15291 Q15291 RBBP5 Retinoblastoma-binding protein 5 1 GKEKDS(1)PFKPK 49.626999999999995 0.0082565 4887500.0 2192.9 2221.7 2350.3 2100.6 2788.2 2643.5 2391.6 2379.0 2589.0 2453.4 2240.4 True False 2415.521593672343 2408.9304560568285 2509.8054915020325 2230.349291191263 2592.366450767819 2621.9722124496325 2482.6136467337355 2331.5489787106053 2480.193333490023 2298.491905300136 1964.8450030657386 1.2293700469520068 1.22601551384368 1.2773554593802536 1.1351273447581154 1.3193745291475723 1.334442263058196 1.2635162788210392 1.1866325206683987 1.262284470082978 1.1698082554673828 1.0 10.940199794536271 -10.714378823357865 0.6739626149126855 0.9736140167657029 1.2522092240647802 0.3506457993164195 0.07259751967579538 0.3696806271689704 0.25316438809806713 0.05994929696627684 0.010913379910019654 1.930283847950134e-11 10.714378823357865 0.2785952072990773 GKEKEPGEQASVPLS(ph)PK ddPTM_A549_MK2206_60min_R1 3 GKEKEPGEQASVPLSPK 17 2 P42858 P42858 HTT Huntingtin 1 GKEKEPGEQAS(0.001)VPLS(0.999)PK;GKEKEPGEQAS(0.001)VPLS(0.999)PK;GKEKEPGEQASVPLS(1)PK 91.637 1.0806999999999999e-06 24852500.0 3023.56 3939.3 4604.8 3497.2 4732.200000000001 3225.84 3934.3100000000004 3699.71 5832.5 5697.7 5560.1 True False 3533.863009055248 4139.793543889288 5257.82988185867 4354.014156995274 4036.099648707436 3567.1962476607096 4649.123200466485 4224.155222386684 4511.448062588622 4410.585612775491 4179.373719046578 0.8455484593183048 0.9905296396498566 1.2580425286921015 1.041786269831006 0.9657187703300611 0.853524113290945 1.112397098943109 1.0107148837004032 1.0794555275180795 1.0553221389786742 1.0 12.029071054690808 GKEKEPGEQASVPLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GKEKEPGEQASVPLSPK 17 2 P42858 P42858 HTT Huntingtin 1 GKEKEPGEQAS(0.001)VPLS(0.999)PK;GKEKEPGEQASVPLS(1)PK 103.27 2.9581999999999996e-09 51313000.0 5815.1 5585.200000000001 6061.799999999999 5521.299999999999 6566.0 7041.2 6095.0 7166.0 7368.9 6771.0 7585.099999999999 True False 6405.444671149635 6055.884405261107 6473.190200564608 5862.338161217901 6104.826811470303 6983.858801702423 6326.948560311976 7023.06850838175 7059.210759040021 6343.47790445391 6652.180785910518 0.9629089883901717 0.9103607674174488 0.9730929463424961 0.8812656104648383 0.9177181149977878 1.0498600423630107 0.9511089316322562 1.0557543059047314 1.061187449083104 0.9535937324327612 1.0 12.699611661854979 -7.256788085805259 24.951068975008752 1.0266334829319872 0.9278199191084847 0.46313081085351415 0.04283651912268385 199.19240927726108 1068533.070823097 0.005710905573155392 0.009677055928701776 5.536201825451261e-08 7.256788085805259 -0.09881356382350248 GKERS(ph)PVK ddPTM_A549_MK2206_60min_R1 1 GKERSPVK 8 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 GKERS(1)PVK 61.353 0.0022335000000000002 3878400.0 1225.2 1071.4 813.67 751.62 886.6 583.59 443.11 627.01 901.08 1924.9 1993.1 True False 1431.983806735932 1125.929683680598 929.0606410640947 935.7669337415041 756.1823144719181 645.3451064443102 523.6173512912561 715.8905876375918 696.9868187290788 1490.0637530988909 1498.1582632383845 0.95582946199595 0.7515425514837225 0.6201351778789101 0.624611535845867 0.5047412766908695 0.43075896737995295 0.34950736790612286 0.47784710414381665 0.46522909884199287 0.9945970260031162 1.0 10.548974320694237 -10.787890612216858 1.0394342358182054 0.9995403964202464 0.5631739355612241 0.5036402461358633 0.16034921977708952 0.37654437763487925 0.7233951516286307 0.11933914786393095 0.030116419576971795 1.6297064627409502e-11 10.787890612216858 -0.4363664608590223 GKERS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 GKERSPVK 8 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 GKERS(1)PVK;GKERS(1)PVK 48.284 0.007351899999999999 20777000.0 3410.3 3768.9 3056.4 2844.6000000000004 2974.4 3317.5 2408.7 3027.8 2703.3999999999996 3785.9 4761.4 True False 3756.5111454698313 4086.5184299557004 3263.825683626264 3020.304481444669 2765.488405122947 3290.483379913621 2500.364396591214 2967.4081537368493 2589.7854993267397 3546.8576278942637 4175.777985001429 0.8995955146472054 0.9786244490568388 0.7816090068363983 0.7232914422876423 0.6622690226961384 0.7879928941941808 0.5987780972963671 0.7106240236897636 0.6201923350879137 0.8493884590210199 1.0 12.027829294354358 -3.8754700190213196 13.72863642644181 0.7916912399968045 49.74473252412739 0.0 0.13075031240381102 0.0 0.0 0.02170788794488505 0.0 0.000133207899755372 3.8754700190213196 48.95304128413059 GKFS(ph)LFK ddPTM_A549_PD325901_60min_R1 1 GKFSLFK 7 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKFS(1)LFK 73.985 0.0052395 24466000.0 3080.4 3783.5 4045.5 3120.2 4874.7 3619.5 4402.5 5012.4 3648.0 3816.7 5518.2 True False 3393.119940329374 4102.348823194402 4320.051957567743 3312.927667511656 4532.317888802055 3590.0239920413983 4570.039546640435 4912.423749848266 3494.6872462617225 3575.7129106379043 4839.4963827519005 0.7011307937789866 0.847680935936906 0.8926656031740261 0.6845604181705812 0.9365267644284975 0.7418176826903609 0.9443213064334923 1.0150692058281685 0.7221179581240902 0.7388605399896246 1.0 12.240641207387224 -7.7640473297676325 24.999804421779007 0.883894632913392 0.8079354723220462 0.11907741359047219 0.11194155623085836 146.0715071195177 1400244.966709068 0.019296920618232957 0.027333650882845322 1.7216809345660292e-08 7.7640473297676325 -0.07595916059134578 GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPSPPR 38 2 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPS(1)PPR;GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPS(1)PPR 191.08 1.1282999999999998e-81 57868000.0 2451.9 2843.8 2604.1 2002.6399999999999 4322.799999999999 2233.44 2608.7 2934.0 4331.0 4322.9 4098.9 True False 2865.7207768003846 2988.5372731481098 2973.4005375582346 2493.286889901926 3686.9218463785314 2469.781138362516 3082.667022440253 3349.9034849981563 3350.035415185823 3346.3538876155612 3081.0300061150024 0.9301177759102353 0.9699799311323422 0.9650670495440964 0.8092381070464854 1.196652365949374 0.8016089208675915 1.0005313211237805 1.08726740030104 1.0873102204577425 1.0861153188946435 1.0 11.58919701749781 -7.9975169853439105 24.98183694568629 1.0457425021961126 0.9483779280448518 0.22890134806556894 0.1003604265731801 99.43428549847414 1000400.5247319462 0.014564380478782215 0.02005568455334344 1.0057337277856127e-08 7.9975169853439105 -0.09736457415126087 GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPSPPR 38 2 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPS(1)PPR;GKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPS(1)PPR 243.96 3.0701999999999986e-144 123491000.0 6683.5 6286.4 7472.1 7814.7 8484.5 9186.2 7895.0 9667.5 8440.8 9489.5 8866.6 True False 7362.003999867348 6816.176990122721 7979.201639387455 8297.396270528601 7888.5779899359995 9111.390632874909 8195.448545309768 9474.674128492965 8086.062529672684 8890.331350511793 7776.064410008331 0.9467519315287488 0.876558710258345 1.0261233985044764 1.067043151012134 1.01446921913132 1.1717226288851108 1.0539326982376407 1.218440798445343 1.0398656831166888 1.1432944587070708 1.0 12.924824453659118 -5.852112853132666 5.519689073746397 1.0489861041951116 0.9124691111200459 0.3905924743985568 0.07344620739623567 0.16021127551282846 7.590966419260383 0.010053428754746671 0.03270874182425282 1.4056822046064866e-06 5.852112853132666 -0.1365169930750657 GKGEKEPPS(ph)PGMER ddPTM_A549_MK2206_60min_R1 4 GKGEKEPPSPGMER 14 2 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A 1 GKGEKEPPS(1)PGMER;GKGEKEPPS(1)PGMER;GKGEKEPPS(1)PGMER;GKGEKEPPS(1)PGMER 82.609 7.5461e-05 253310000.0 16989.7 18033.4 15574.099999999999 14527.499999999998 22065.6 16781.8 15508.199999999999 16758.899999999998 23383.6 26035.600000000002 23962.7 True False 19857.146001715202 18951.223033120874 17782.741565986587 18086.73815216426 18819.779470123558 18557.63893714274 18325.83919860771 19134.52539697873 18087.251935936092 20154.139877490496 18012.100253124478 1.1024336819505918 1.0521384384274395 0.9872664106953266 1.004143764357898 1.0448409239149652 1.0302873444157978 1.017418232248003 1.0623150619905943 1.0041722887256626 1.1189222574971205 1.0 14.136678792226533 GKGGVT(ph)GSPEASISGSK ddPTM_A549_MK2206_60min_R1 1 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVT(0.5)GS(0.5)PEASISGSK 72.086 0.00034202 4016400.0 864.19 1273.0 985.36 783.56 1299.8 1279.3 933.1 914.48 1309.7 1747.4 1450.1 True False 1010.0441445830264 1337.7902625773766 1125.0988647472761 975.532235175345 1108.601141834648 1414.6746768693874 1102.6321917579637 1044.110340477544 1013.0550411611345 1352.661126377994 1090.0001492759916 0.9266458773000406 1.2273303480425888 1.03220065198578 0.8949835794273245 1.017065128450681 1.2978664982835586 1.0115890282128517 0.9578992637487904 0.9294081673603749 1.2409733404866679 1.0 10.090112617242012 -7.995816305721506 24.958942574766972 0.966012683175132 1.069554627493349 0.0 0.13824620197532125 168.43102514177264 1004812.0270413256 0.01714563027966019 0.023636934688021433 1.0096798617859904e-08 7.995816305721506 0.10354194431821695 GKGGVT(ph)GSPEASISGSK ddPTM_A549_PD325901_60min_R1 1 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVT(0.477)GS(0.477)PEAS(0.037)IS(0.007)GS(0.002)K 43.198 0.026045999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GKGGVTGS(ph)PEASISGS(ph)KGDLK ddPTM_A549_PD325901_60min_R1 1 GKGGVTGSPEASISGSKGDLK 21 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 GKGGVT(0.105)GS(0.878)PEAS(0.021)IS(0.302)GS(0.694)KGDLK 73.072 0.00011292 11648000.0 2531.4 2393.2 2610.5 2416.5 2645.5 2875.9 2422.5 2839.7 2925.5 2162.7 2288.2 True False 2788.3858644818147 2594.8833629361297 2787.6642282117396 2565.7617167303097 2459.6892064795443 2852.4796239016073 2514.6895631428656 2783.0599557984456 2802.551408700292 2026.1467529113077 2006.765906094903 1.3894923448783905 1.2930672955201252 1.389132743258748 1.2785555649204712 1.2256981240358096 1.4214311770187655 1.253105584216529 1.3868383688131238 1.3965512370867215 1.009657751687699 1.0 10.970656617449569 -10.77343449621899 0.9246049716415683 0.9912338042578822 1.3367500852474345 0.8000712255655704 0.06382205161971999 0.20598644605290156 0.2998079149243627 0.049155488948528954 0.011248485391715574 1.684866532709839e-11 10.77343449621899 0.34551628098955234 GKGGVTGS(ph)PEASISGSK ddPTM_A549_MK2206_60min_R1 5 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVT(0.311)GS(0.688)PEASISGSK;GKGGVT(0.149)GS(0.85)PEAS(0.001)ISGSK;GKGGVT(0.04)GS(0.657)PEAS(0.226)IS(0.078)GSK;GKGGVT(0.001)GS(0.995)PEAS(0.004)ISGSK;GKGGVT(0.024)GS(0.973)PEAS(0.003)ISGSK 210.98 4.8479999999999995e-55 1022008100.0 15686.9 19834.1 18150.399999999998 17239.100000000002 25045.5 17589.6 17708.3 16813.300000000003 26614.0 27136.900000000005 29435.2 True False 18334.465212117117 20843.57097170932 20724.399645519345 21462.680273892616 21361.34012757322 19450.919796968497 20925.668890052035 19196.636763571747 20585.97149382486 21006.65544260444 22125.627469808085 0.8286528929918817 0.9420555869049039 0.9366694650264354 0.970037134683746 0.9654569189833018 0.8791126861152567 0.9457661220503927 0.867619993591904 0.9304130028364535 0.9494264273982485 1.0 14.433430749309792 -10.298862460043551 0.8267465818867794 0.9976164502949187 0.9212613816163426 0.16359663645132372 0.04386746804636327 0.5212877578830072 0.6798382491872921 0.0222122520090083 0.007934372118861714 5.025017053356845e-11 10.298862460043551 -0.07635506867857611 GKGGVTGS(ph)PEASISGSK ddPTM_A549_PD325901_60min_R1 2 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVT(0.007)GS(0.96)PEAS(0.034)ISGSK;GKGGVT(0.033)GS(0.967)PEASISGSK 137.42 4.044e-13 1573970000.0 8305.3 7819.5 8581.2 8622.8 10736.8 10867.0 8779.8 9171.0 9814.599999999999 9558.3 10224.6 True False 9148.447941961289 8478.476707537635 9163.571834947548 9155.410772200343 9982.684207949183 10778.502754942363 9113.920093490904 8988.07721048968 9402.126493190872 8954.78730677032 8967.039019079599 1.0202306382849118 0.945515759382509 1.0219172477614715 1.0210071298585783 1.113264276725968 1.202013589102091 1.0163801087626338 1.0023461692723001 1.048520751742634 0.9986336947700116 1.0 13.130415960140988 -5.955363538640762 6.391570475421533 1.0399793235149553 0.9824016525529431 0.14142371611316362 0.06040816717071796 0.32549216652624313 32.61608149051296 0.008816130918766837 0.027728371669211917 1.1082467371913041e-06 5.955363538640762 -0.05757767096201216 GKGGVTGSPEASISGS(ph)KGDLK ddPTM_A549_MK2206_60min_R1 3 GKGGVTGSPEASISGSKGDLK 21 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVTGSPEAS(0.003)IS(0.164)GS(0.833)KGDLK;GKGGVTGSPEAS(0.003)IS(0.161)GS(0.836)KGDLK;GKGGVTGSPEASIS(0.167)GS(0.833)KGDLK 118.57 2.2280000000000003e-15 63223700.0 4833.7 5756.5199999999995 5799.599999999999 5513.33 7143.799999999999 6231.3 5872.1 5919.3 8927.9 8922.4 8035.6 True False 5649.51038738122 6049.502279915102 6622.070487931622 6864.096097502789 6092.956483334638 6890.692029997826 6938.984560306444 6758.37890209598 6905.7449049266925 6906.8236431240775 6040.138748722268 0.9353279158655616 1.0015502178976956 1.0963441012563586 1.1364136459538816 1.0087444571738593 1.1408168448871283 1.1488121132605302 1.1189112010921354 1.1433089854744702 1.1434875804111533 1.0 12.560365974906885 -5.558643460601506 3.110232288766345 1.0846919674175037 0.9414279486077016 0.4775889672873149 0.05337833289744353 0.21665089028465914 4.004448376145308 0.008943207759485318 0.053642217034669405 2.7628451171181858e-06 5.558643460601506 -0.1432640188098021 GKGGVTGSPEASISGS(ph)KGDLK ddPTM_A549_PD325901_60min_R1 3 GKGGVTGSPEASISGSKGDLK 21 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVTGSPEASIS(0.01)GS(0.99)KGDLK;GKGGVTGSPEASIS(0.017)GS(0.983)KGDLK;GKGGVTGSPEAS(0.009)IS(0.065)GS(0.926)KGDLK 164.35 1.1622999999999999e-28 158383000.0 14271.0 13240.8 13432.7 13632.4 15558.4 15490.5 15601.1 15357.2 14871.7 12090.3 14909.099999999999 True False 15719.781414245073 14356.648684591644 14344.323799387032 14474.442386573266 14465.631657566177 15364.35050385891 16194.808397749503 15050.888598509666 14246.694166729852 11326.916394656495 13075.375216571765 1.202243236149872 1.0979913346116439 1.097048731818189 1.1070001546287038 1.1063263132389805 1.175060007791294 1.2385731292226443 1.1510865538630302 1.0895820525803004 0.8662784973314365 1.0 13.674564726810978 -9.589467072566478 0.9677255847997841 1.016086630980731 1.1429817142682281 0.5602264828570972 0.06406084656801248 0.26481867955381705 0.5194302385723253 0.015014792105982493 0.010159769242714983 2.5735518791457134e-10 9.589467072566478 0.1268950832874971 GKGGVTGSPEASISGSK ddPTM_A549_MK2206_60min_R1 2 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 83.41799999999999 0.00014922 4275500.0 1663.38 1610.5900000000001 1906.1999999999998 1359.62 2532.02 1811.31 1609.05 1438.26 2012.3400000000001 2543.2 2131.55 False True 1944.117878263478 1692.562151613903 2176.527823314584 1692.7269610356611 2159.5632121466133 2002.98162194973 1901.3935571194431 1642.137759486521 1556.5482030466496 1968.6893536708892 1602.2273072127716 1.2133845612988945 1.0563807919104047 1.3584388516638526 1.056483654607237 1.3478507090878267 1.2501232583746866 1.1867189808586522 1.0249093571767776 0.9714902473821987 1.2287203849344033 1.0 10.64586312137596 -8.28402638765355 3.266885629707502 0.9869405902335742 1.2128108650181484 0.22336886721436466 0.11628421895129029 0.12463769209070219 2.757587905947495 0.013816938659458813 0.017355135040995243 5.1996440263139074e-09 8.28402638765355 0.22587027478457422 GKGGVTGSPEASISGSK ddPTM_A549_PD325901_60min_R1 2 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 80.638 0.00026546 2113600.0 2079.3 1570.6 1715.3 2116.3 2160.4 2349.1 1632.9 1850.3 2455.8 2365.0 2332.4 False True 2290.3890053002433 1702.9599740211784 1831.7105729368295 2247.0190445339786 2008.6609569753953 2329.969708441621 1695.0409030571664 1813.39431496773 2352.591266274544 2215.6734963865756 2045.5295863017895 1.1197046577268759 0.8325276668816318 0.8954700949833077 1.0985023436382904 0.9819759980137707 1.1390545138259693 0.8286562631057866 0.8865158084788458 1.150113536381503 1.0831784156162696 1.0 10.998258689012065 -8.763189297249165 24.999999322954363 1.070886943244773 0.9707803009478542 0.1546194229021738 0.10890823120338619 68.7169409320041 981713.5979154026 0.01949540131528516 0.021285414010695173 1.7250858097272577e-09 8.763189297249165 -0.10010664229691879 GKGS(ph)LGSQGAKDEPEEELQK ddPTM_A549_MK2206_60min_R1 2 GKGSLGSQGAKDEPEEELQK 20 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GKGS(0.999)LGS(0.001)QGAKDEPEEELQK;GKGS(0.86)LGS(0.14)QGAKDEPEEELQK 72.033 0.00012978 6350000.0 2514.9 2801.5 2706.5 2313.21 3487.1000000000004 2385.0 2336.3 2736.0 3640.2 3605.8 4088.3 True False 2939.3536365982645 2944.084383826018 3090.3223973354934 2879.9465538439435 2974.1522093334393 2637.3791169651304 2760.775468442967 3123.8363786485875 2815.7005122049027 2791.247275663138 3073.062278660121 0.9564900968684062 0.9580295213247879 1.005616586033817 0.9371585385180096 0.9678138415828632 0.8582250790293283 0.898379277118551 1.016522314025671 0.9162523427389079 0.9082950563826984 1.0 11.585461289537532 -3.773310261967305 15.464176385773598 0.9548381337093134 0.9507646711298495 0.0 0.04776232886124519 0.0 0.0 0.006383232922660246 0.0 0.00016853485744654294 3.773310261967305 -0.004073462579463838 GKGS(ph)PRPQAPK ddPTM_A549_MK2206_60min_R1 8 GKGSPRPQAPK 11 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK 98.59200000000001 5.6645e-05 4638425200.0 67442.0 73832.6 63284.8 59126.799999999996 81381.50000000001 67305.9 61720.100000000006 64112.200000000004 90151.40000000001 93738.5 93893.80000000002 True False 78824.5608014075 77590.3639754679 72259.53624640575 73612.86865430292 69410.38915542107 74428.16566395962 72933.84325208528 73200.300685378 69732.25184220342 72562.9077457843 70577.3781229502 1.1168530611053613 1.0993659163747997 1.0238342393581854 1.0430093977997412 0.9834651130636198 1.0545612155540987 1.0333883914620625 1.0371637857934946 0.9880255358979966 1.028132663406328 1.0 16.106918216024752 -2.000000000000009 0.34067293256429304 0.9971979411642067 2.396937782841375 0.5812949344445608 0.02581596160553364 20.514053685969447 0.2537313843548147 0.006671300866974465 18.56662413358002 0.009999999999999796 2.000000000000009 1.3997398416771685 GKGS(ph)PRPQAPK ddPTM_A549_PD325901_60min_R1 9 GKGSPRPQAPK 11 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK 98.59200000000001 5.6645e-05 8001682300.0 64970.5 66290.3 65843.91 64243.4 78672.29999999999 66593.79999999999 67787.77 68713.49999999999 73235.6 71559.4 75087.6 True False 71566.25733124593 71876.81622682804 70312.47368419594 68211.56891065271 73146.62905270107 66051.48217190406 70367.4706822409 67342.95533780198 70157.76241565926 67041.12727159646 65852.30121951393 1.086769270107736 1.0914852616498825 1.0677299408233942 1.0358266552185371 1.1107680019999913 1.00302466198905 1.0685650976368462 1.0226363253930801 1.0653805731373516 1.0180529158444998 1.0 16.006946236128 -14.999999999999998 0.12776569040381633 0.7981042793588424 1.0905109437250957 0.40465793155169527 0.027820880774177114 52.11064666968544 0.457430647672721 2.7355208004580835 0.08343678136461959 1.000000000000004e-15 14.999999999999998 0.2924066643662533 GKGSLGS(ph)QGAKDEPEEELQK ddPTM_A549_PD325901_60min_R1 1 GKGSLGSQGAKDEPEEELQK 20 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GKGS(0.126)LGS(0.874)QGAKDEPEEELQK 96.90299999999999 2.7151e-07 3872400.0 1390.2 1186.9 1377.2 1400.8 1679.1 1873.9 1539.2 1924.8 2208.2 1946.8 2022.1 True False 1531.3320805888509 1286.924228425913 1470.665073776367 1487.3242345523772 1561.1658085805338 1858.639579689564 1597.7750982825587 1886.4083540236109 2115.3970332223507 1823.8787157570328 1773.3945191480213 0.8635033344551766 0.7256841128866127 0.8292937966690613 0.8386877361428416 0.8803262848306045 1.048068864328337 0.9009699088560202 1.063727407328339 1.1928519065451015 1.0284675496985662 1.0 10.792297806518118 -7.3283315025469005 0.9049202250565742 1.087951277494115 0.7934550098110534 0.6837323278959333 0.07226738975732731 0.2518611310454518 0.40786477666694987 0.015498208725936302 0.0356399983774408 4.695355692630142e-08 7.3283315025469005 -0.2944962676830615 GKHQPWQS(ph)PERPLSR ddPTM_A549_MK2206_60min_R1 2 GKHQPWQSPERPLSR 15 2 J3QRS2;V9GYU5;J3QL08;V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52 J3QRS2 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 GKHQPWQS(0.981)PERPLS(0.019)R;GKHQPWQS(0.89)PERPLS(0.11)R 77.505 0.00014263 28832000.0 989.87 1025.3 810.09 839.73 1807.23 1529.0 1161.4099999999999 1165.72 1927.8 1523.0700000000002 1380.1399999999999 True False 1156.9358560020376 1077.483390589619 924.9729432320377 1045.4638876969118 1541.3888610231054 1690.797765131943 1372.4231634654564 1330.9643798677753 1491.1563780640101 1179.0074291819446 1037.4131480737656 1.1152122547802654 1.0386251539131295 0.8916148257321558 1.0077603986782842 1.485800390987048 1.6298210296171398 1.3229282528505892 1.282964634040995 1.4373794864974865 1.1364878412916655 1.0 10.018774844169169 -6.719744682461502 22.503362575882917 1.2744823904745577 1.0064184220542662 0.41981276490753683 0.17064407550670455 58.687611830700945 31673.719860006513 0.031452616278288756 0.06547263069191862 1.9065812492896336e-07 6.719744682461502 -0.26806396842029145 GKHQPWQS(ph)PERPLSR ddPTM_A549_PD325901_60min_R1 2 GKHQPWQSPERPLSR 15 2 J3QRS2;V9GYU5;J3QL08;V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52 J3QRS2 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 GKHQPWQS(0.945)PERPLS(0.055)R;GKHQPWQS(0.997)PERPLS(0.003)R 77.221 0.00014668 22197000.0 1242.79 920.75 1350.13 960.3700000000001 991.72 1411.17 921.3299999999999 1071.73 1650.87 1299.73 1691.5500000000002 True False 1368.9571259063566 998.3448338724062 1441.7579407912335 1019.6898737414807 922.0650084482681 1399.6778993919218 956.3917173211212 1050.3535043940792 1581.489674955069 1217.66482598669 1483.5000736189288 0.9227887145073407 0.6729658135014384 0.9718623992206031 0.6873541106432136 0.6215469920395311 0.9434970205141098 0.6446859924907509 0.7080238977216841 1.0660529804336976 0.8208053694370596 1.0 10.534789283074241 -8.764862911679723 24.999616418106434 1.0311916997218777 0.7686695639426903 0.24674214566716457 0.13434069878705338 48.754965105905825 356021.67674751766 0.019130646239196122 0.020769329008097772 1.7184507434582132e-09 8.764862911679723 -0.2625221357791875 GKHSLDS(ph)DEEEDDDDGGSSK ddPTM_A549_MK2206_60min_R1 4 GKHSLDSDEEEDDDDGGSSK 20 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GKHSLDS(1)DEEEDDDDGGSSK;GKHS(0.005)LDS(0.995)DEEEDDDDGGSSK;GKHS(0.001)LDS(0.999)DEEEDDDDGGSSK;GKHS(0.009)LDS(0.991)DEEEDDDDGGSSK 185.28 4.2455e-44 111414000.0 10679.2 10962.9 10294.099999999999 8215.2 14198.3 11663.1 9844.5 11539.7 15723.599999999999 14786.3 15372.499999999998 True False 12481.587878627448 11520.864783668132 11753.958171221613 10227.92436879434 12109.748878374281 12897.281500660802 11633.118220727983 13175.487813849097 12162.22970542965 11446.064560468652 11555.083990583531 1.0801814931677645 0.9970386016282283 1.0172109679860526 0.8851449610517137 1.0480018049408173 1.1161564477740753 1.006753237813593 1.140232976634879 1.0525436003183442 0.9905652412216371 1.0 13.496240125928594 GKHSLDS(ph)DEEEDDDDGGSSK ddPTM_A549_PD325901_60min_R1 6 GKHSLDSDEEEDDDDGGSSK 20 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GKHSLDS(1)DEEEDDDDGGSSK;GKHS(0.005)LDS(0.995)DEEEDDDDGGSSK;GKHS(0.007)LDS(0.993)DEEEDDDDGGSSK;GKHS(0.001)LDS(0.999)DEEEDDDDGGSSK;GKHS(0.003)LDS(0.997)DEEEDDDDGGSSK;GKHS(0.006)LDS(0.994)DEEEDDDDGGSSK 258.4 2.1486999999999994e-98 213747600.0 35161.0 36693.1 37177.4 34932.799999999996 42852.200000000004 37137.1 36900.17 37248.799999999996 40565.09999999999 43108.9 43425.8 True False 38730.51883583989 39785.35631144564 39700.48192986752 37090.519717854986 39842.4093040645 36834.667770366235 38304.4261618978 36505.8434628817 38860.28991593514 40386.99669698909 38084.70189882705 1.0169573845878712 1.0446545286644602 1.0424259597812484 0.9738954978927462 1.0461525840456056 0.967177526247112 1.005769357566575 0.958543500218549 1.0203648178517573 1.0604519579614444 1.0 15.216923982863559 -6.230382545182962 24.981551564045226 1.0035504457630842 1.035676820807304 0.16881366117541163 0.03023780781808923 711.7985844555318 572557.1190109234 0.0032789660888695193 0.008674069247837294 5.883252050105874e-07 6.230382545182962 0.03212637504421978 GKHSLDS(ph)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR ddPTM_A549_PD325901_60min_R1 1 GKHSLDSDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 44 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GKHS(0.226)LDS(0.774)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 173.94 1.0478999999999999e-66 25487000.0 1544.5 994.0 1780.1 1716.1 1406.4 1485.6 1266.7 2365.2 1459.8 1669.5 1884.1 True False 1701.2965029991938 1077.767868443304 1900.9082906108847 1822.0995994541222 1307.6193158166047 1473.5017661491097 1314.904961664836 2318.0242305364955 1398.449682591246 1564.0874850813484 1652.3676442939463 1.0296113633513773 0.6522567009618687 1.150414859051019 1.1027204543409599 0.7913610026994616 0.8917517667678214 0.7957702186953028 1.4028501699008897 0.8463308316526623 0.9465735367565129 1.0 10.690319000226753 -11.429410897891731 2.2531843327795724 1.0007891492302416 0.9400196046600761 0.0 0.1982714629938385 1.802210130599251 16.549628518343223 0.15456912456530442 0.027609273394398694 3.720395428945185e-12 11.429410897891731 -0.06076954457016559 GKIEVLDS(ph)PASK ddPTM_A549_MK2206_60min_R1 6 GKIEVLDSPASK 12 1 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.993)PAS(0.007)K;GKIEVLDS(0.986)PAS(0.014)K;GKIEVLDS(0.973)PAS(0.027)K;GKIEVLDS(1)PASK;GKIEVLDS(0.998)PAS(0.002)K;GKIEVLDS(0.97)PAS(0.03)K 146.96 5.2022e-12 393001000.0 14693.900000000001 17728.2 18112.5 16007.0 21714.3 17727.7 15753.499999999998 17180.300000000003 24800.7 22102.1 23658.199999999997 True False 17173.87108863622 18630.489656735484 20681.12485562132 19928.715718581545 18520.155234759273 19603.633447305117 18615.707033393068 19615.660137462128 19183.38104857978 17109.220259424896 17783.21600689696 0.9657348300766062 1.0476445683114866 1.1629575239709427 1.1206474526796775 1.0414401550077614 1.1023671668669004 1.0468133000337643 1.1030434613095 1.078735198466902 0.9620993330334251 1.0 14.118228631593478 -10.585302744510953 0.7755258690324822 0.9974754287571067 1.0775934833828695 0.3189351883385425 0.05034964226286513 0.7979301781351819 0.8190842774119593 0.03845641443006716 0.009435650461247894 2.5983476365558943e-11 10.585302744510953 0.08011805462576282 GKIEVLDS(ph)PASK ddPTM_A549_PD325901_60min_R1 4 GKIEVLDSPASK 12 1 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.94)PAS(0.06)K;GKIEVLDS(0.989)PAS(0.011)K;GKIEVLDS(0.988)PAS(0.012)K;GKIEVLDS(0.974)PAS(0.026)K 138.77 1.0665e-08 751161700.0 17904.4 18416.100000000002 20611.300000000003 20077.9 21816.2 20712.5 21769.6 20322.3 20697.7 20228.1 21796.600000000002 True False 19722.041507477352 19968.089378308578 22010.106763815613 21318.06628278067 20283.905373804206 20543.8242672075 22598.05404078221 19916.95578396406 19827.847647190592 18950.89431385087 19115.75638003153 1.0317165125665209 1.0445879818371928 1.1514117634815406 1.1152091426028892 1.0611092216572153 1.0747063238715335 1.1821689705351297 1.0419130369734921 1.0372515349642621 0.9913755928406329 1.0 14.222474665996204 -8.507567568732705 23.40353201842508 1.018748424202737 1.094779866800191 0.4283163606088264 0.04341909334086319 226.9963278349792 346970.3580922562 0.007209360453616801 0.008567982888541098 3.107652368003401e-09 8.507567568732705 0.07603144259745398 GKIEVLDS(ph)PASKK ddPTM_A549_MK2206_60min_R1 2 GKIEVLDSPASKK 13 2 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.93)PAS(0.07)KK;GKIEVLDS(0.989)PAS(0.011)KK 84.65299999999999 7.4014e-05 70037000.0 14150.7 15691.2 16029.9 15450.4 20885.3 14779.4 14746.9 15067.4 22982.9 22212.6 23623.1 True False 16538.99220860117 16489.815057465934 18303.180859799824 19235.74869359482 17813.100036589618 16343.34629822827 17426.220843034534 17203.250091977257 17777.30984614967 17194.758232679316 17756.832305607673 0.9314156896879684 0.9286462119855909 1.0307683569225132 1.0832871743413437 1.0031687932855105 0.9203976259361858 0.981381168843458 0.9688242697738609 1.001153220359891 0.968346039245364 1.0 14.11608661751021 GKIEVLDS(ph)PASKK ddPTM_A549_PD325901_60min_R1 4 GKIEVLDSPASKK 13 2 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.998)PAS(0.002)KK;GKIEVLDS(0.919)PAS(0.081)KK;GKIEVLDS(0.782)PAS(0.218)KK;GKIEVLDS(0.989)PAS(0.011)KK 129.62 9.513500000000001e-09 316512000.0 24606.600000000002 23092.499999999996 25713.6 23099.3 29586.9 28559.4 29065.799999999996 29354.7 28970.199999999997 26075.9 30963.3 True False 27104.643917578484 25038.58601813579 27458.679524437975 24526.091298683416 27508.818213263876 28326.821715238886 30171.914924416044 28769.197480183357 27752.68324058425 24429.46322385908 27155.010392530494 0.9981452235066769 0.9220613675413335 1.0111828030082806 0.9031884335212697 1.0130291911370692 1.0431526744335446 1.1110993694451101 1.0594434347223405 1.0220096711219877 0.8996300450902744 1.0 14.728930794947425 -6.97297558814661 23.67547813899681 1.0252797066369626 0.9595746286266504 0.2269414530883237 0.05561797794219797 107.20675649020342 93920.38722419685 0.006224285999132666 0.011762516979565343 1.0642028357779616e-07 6.97297558814661 -0.06570507801031211 GKKQS(ph)FDDNDS(ph)EELEDKDSK ddPTM_A549_PD325901_60min_R1 1 GKKQSFDDNDSEELEDKDSK 20 3 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 2 GKKQS(1)FDDNDS(1)EELEDKDSK 56.303000000000004 0.0023166 3532400.0 1677.2 1602.6 2032.1 1642.9 2246.3 2001.4 2198.5 2439.9 2532.7 1594.8 2696.9 True False 1847.468109310618 1737.6567263251886 2170.010526009988 1744.3782017033827 2088.5276373143056 1985.1012619620562 2282.165120565361 2391.234280435479 2426.2594267014983 1494.1040558297293 2365.198397057662 0.7811049219418095 0.7346769423177593 0.9174750535555536 0.7375187653912721 0.8830242908639129 0.8392958765875829 0.9648937372037816 1.0110079067405955 1.0258164514739216 0.6317034789506092 1.0 11.207745489134279 -7.72037229261422 1.406867840185202 1.0138625293653887 0.8030114822327254 0.0 0.1260616360355824 0.12486609860043757 0.502264401405435 0.007921751597255187 0.01284771416564836 1.9038279894536157e-08 7.72037229261422 -0.21085104713266323 GKKQS(ph)FDDNDSEELEDKDSK ddPTM_A549_MK2206_60min_R1 2 GKKQSFDDNDSEELEDKDSK 20 3 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 GKKQS(1)FDDNDSEELEDKDSK;GKKQS(1)FDDNDSEELEDKDSK 73.546 0.00012349 7138400.0 1947.56 2394.2 2216.7 1864.27 3139.1000000000004 1919.73 1825.82 1695.47 3475.6000000000004 3050.7 3416.6000000000004 True False 2276.2605147295394 2516.054553544978 2531.0613922680927 2321.0162336902613 2677.3425483406268 2122.874554386359 2157.547860203114 1935.8080646591081 2688.3821493927157 2361.544751196832 2568.163926637029 0.8863377026365554 0.97970948328042 0.9855528948194824 0.9037648296577377 1.0425123258570825 0.826611779866494 0.8401129841537762 0.7537712233167371 1.0468109615234378 0.9195459552651059 1.0 11.326521577697982 GKKQS(ph)FDDNDSEELEDKDSK ddPTM_A549_PD325901_60min_R1 2 GKKQSFDDNDSEELEDKDSK 20 3 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 GKKQS(1)FDDNDSEELEDKDSK;GKKQS(1)FDDNDSEELEDKDSK 119.73 7.313899999999999e-15 18219000.0 3913.8 3449.8 3696.0 3555.2000000000003 4423.7 4417.7 4562.8 4360.2 4541.5 5829.700000000001 4974.5 True False 4311.12609481272 3740.5267530741517 3946.8327858535117 3774.7966295549772 4112.994572936516 4381.723715883768 4736.439850859963 4273.23239048927 4350.636548491672 5461.611747097176 4362.6680359536285 0.9881856834588053 0.8573943106025292 0.9046832702664667 0.8652495671103361 0.9427704650091405 1.004367895923572 1.0856750529322896 0.9794997820766327 0.9972421721380581 1.2518971652408413 1.0 12.090994985031534 -7.091162045504017 3.5643256707601294 1.0045465246599086 0.9006783564556033 0.34277240197459713 0.08497634918352938 0.12401583043410255 2.960157259123523 0.005697842679285728 0.010373145075083506 8.106585256198047e-08 7.091162045504017 -0.10386816820430522 GKLEAIIT(ph)PPPAK ddPTM_A549_MK2206_60min_R1 2 GKLEAIITPPPAK 13 1 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 GKLEAIIT(1)PPPAK;GKLEAIIT(1)PPPAK 84.874 0.00013597 161420000.0 15430.3 16113.7 17501.9 16009.7 21823.0 16807.9 16633.6 17193.9 25235.0 22624.0 25155.0 True False 18034.557405384774 16933.818502822538 19983.93259409794 19932.077218702747 18612.865608753295 18586.500821818958 19655.709811194156 19631.18797911037 19519.31279201438 17513.222686949604 18908.319257318515 0.9537895547434472 0.8955750255945281 1.0568857190394172 1.0541432555401762 0.9843744097746359 0.9829800612566346 1.0395270750247334 1.0382301944426957 1.032313476749626 0.9262178435119803 1.0 14.20673350873361 -5.758259272828081 24.99999418657044 1.0191553294335238 0.924682275512577 0.4228069768622832 0.03909996194943817 36.91160029180085 290160.26330931764 0.003844429956852836 0.013731339477019582 1.7447802120742467e-06 5.758259272828081 -0.09447305392094685 GKLEAIIT(ph)PPPAK ddPTM_A549_PD325901_60min_R1 2 GKLEAIITPPPAK 13 1 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 GKLEAIIT(1)PPPAK;GKLEAIIT(1)PPPAK 102.78 5.1268000000000004e-05 217930000.0 23728.0 26120.0 24214.0 25749.0 32349.0 30154.0 27093.0 30479.0 30704.0 27928.0 29113.0 True False 26136.849092369626 28321.224068147974 25857.307650610634 27339.457249778105 30076.91783799158 29908.43582152684 28124.038940858456 29871.07243468705 29413.617656036182 26164.621313777694 25532.285562512432 1.0236783944930037 1.1092318389909588 1.0127298469736454 1.070779863512064 1.1779955133414208 1.1713967301634622 1.101508866959852 1.1699333520906958 1.1520166333727084 1.0247661240399757 1.0 14.640035068180236 -5.2513592772455855 22.375683289618426 1.0918964307753185 1.0236782302736849 0.09663510995788993 0.0628816754932117 764.6066392446927 1697103.0702264137 0.010189325387687149 0.1751811675179531 5.605840318055159e-06 5.2513592772455855 -0.06821820050163363 GKLEEQRPER ddPTM_A549_MK2206_60min_R1 2 GKLEEQRPER 10 2 J3KPG2;E9PJF7;Q5W0H4;A0A0B4J2C3;P13693-2;P13693 J3KPG2 TPT1 Translationally-controlled tumor protein 0 ; 55.426 0.0057338 13123800.0 2642.2 2637.3 2671.3999999999996 2315.5 3535.7 2345.9900000000002 2396.7 2479.0 4408.1 3524.5 4122.4 False True 3088.1387644120787 2771.5273051809254 3050.2446895407484 2882.7976039467453 3015.603213713468 2594.2411046578713 2832.1493666127017 2830.405841619099 3409.6723882892225 2728.313002128443 3098.694307547996 0.996593551319275 0.8944177870110852 0.984364505434037 0.9303265562287459 0.9731851271575485 0.8372045923790077 0.9139815307737755 0.9134188663672365 1.100357779721519 0.8804718153328792 1.0 11.597444721826411 -8.750027623102097 24.98373862440411 1.0473911743952606 0.9287985760719439 0.00016304529498512021 0.06914890427990758 126.33161381659086 276577.2625558938 0.008989432757424122 0.0101494839371844 1.778166306986495e-09 8.750027623102097 -0.1185925983233167 GKLEEQRPER ddPTM_A549_PD325901_60min_R1 2 GKLEEQRPER 10 2 J3KPG2;E9PJF7;Q5W0H4;A0A0B4J2C3;P13693-2;P13693 J3KPG2 TPT1 Translationally-controlled tumor protein 0 ; 69.979 0.0011126 21802000.0 2580.8 2712.6 2224.01 2632.0 2553.4 2576.4 2832.8999999999996 2536.6800000000003 2686.1 2729.4 2807.6000000000004 False True 2842.800916115457 2941.200321870528 2374.944692658569 2794.5726622943 2374.057992751793 2555.4186526026983 2940.7075597223597 2486.0839274130385 2573.2125581643672 2557.0652181976807 2462.28299884278 1.154538660849103 1.1945013319966993 0.964529541801142 1.13495185712109 0.9641694288867482 1.0378249185019308 1.1943012079051956 1.0096662035117183 1.04505150682262 1.0384936335098143 1.0 11.265780870027744 -2.0000000000000004 0.3787274603329469 1.0258072055164358 3.1452872431488945 0.20589101277963617 0.07394389121685987 55.36289251405375 0.6619451389450547 0.016581621063838037 87.21441726584813 0.00999999999999999 2.0000000000000004 2.1194800376324587 GKLPES(ph)PK ddPTM_A549_MK2206_60min_R1 4 GKLPESPK 8 1 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 GKLPES(1)PK;GKLPES(1)PK;GKLPES(1)PK;GKLPES(1)PK 86.11399999999999 0.00079523 145999200.0 26804.399999999998 26415.199999999997 25217.7 23114.3 41903.1 31395.2 29778.0 33956.0 43577.0 36591.4 36285.4 True False 31328.327415338386 27759.62085155848 28793.949055713016 28777.304537640368 35739.20949870093 34717.4192255529 35188.27714732466 38769.366985888686 33706.8790781696 28325.377326168997 27274.733753906006 1.148620833406004 1.0177778856441828 1.05570046312879 1.0550902090297831 1.3103412785315542 1.2728783913639863 1.2901419117348984 1.4214388795027757 1.2358279784616577 1.0385207636394445 1.0 14.73527749309946 -6.645008511713127 17.524327904694545 1.1755723314660538 1.0645532043254908 0.2132269779515551 0.12206040972699733 2.3281499246214343 343.6944510033912 0.021735407450343126 0.045246043532667986 2.2645999233915782e-07 6.645008511713127 -0.11101912714056295 GKLPES(ph)PK ddPTM_A549_PD325901_60min_R1 4 GKLPESPK 8 1 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 GKLPES(1)PK;GKLPES(1)PK;GKLPES(1)PK;GKLPES(1)PK 92.611 0.00071963 223401400.0 31602.8 33970.7 33883.2 31097.7 42163.3 33933.3 34472.600000000006 32789.2 35973.899999999994 38094.6 41533.2 True False 34811.092991248246 36833.53010918202 36182.71770823366 33018.534300999025 39201.89526348854 33656.95845534976 35784.47365713052 32135.193683370195 34462.042085607056 35689.30045473489 36424.879700647165 0.9556954827946832 1.011218991301915 0.9933517421497701 0.9064830020677428 1.0762395259960746 0.924010147238778 0.9824184445143063 0.8822319784572753 0.9461127220962315 0.9798055820099467 1.0 15.152636587101657 GKLPES(ph)PKR ddPTM_A549_PD325901_60min_R1 2 GKLPESPKR 9 2 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 GKLPES(1)PKR;GKLPES(1)PKR 62.408 0.0014777000000000002 53773000.0 12957.4 11667.3 13616.8 10863.4 13761.8 10078.3 13485.5 11754.3 12800.1 14006.0 13557.7 True False 14272.825709266275 12650.544317392905 14540.917932470249 11534.407545428538 12795.21864363265 9996.225666249715 13998.698082048753 11519.851265430027 12262.156310546794 13121.658769721093 11890.188849341348 1.200386797057215 1.063948140579254 1.2229341448412518 0.9700777415379304 1.0761156787128268 0.8407121024661818 1.1773318539700237 0.968853515397963 1.0312835620963288 1.1035702574604576 1.0 13.537484008833571 -6.268376919636541 24.969789852742597 1.0129533911978343 1.1525755399572475 0.32672530007649114 0.08957790523781768 388.0564116646586 1396705.2114908902 0.010442941064941992 0.024748603331655017 5.390425900207241e-07 6.268376919636541 0.13962214875941314 GKLPES(ph)PKRAEEIWQQSVIGDYLAR ddPTM_A549_MK2206_60min_R1 3 GKLPESPKRAEEIWQQSVIGDYLAR 25 3 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 GKLPES(0.999)PKRAEEIWQQS(0.001)VIGDYLAR;GKLPES(1)PKRAEEIWQQSVIGDYLAR;GKLPES(1)PKRAEEIWQQSVIGDYLAR 136.02 1.8722e-24 23678800.0 3424.58 3932.59 3155.66 2568.46 6032.08 4669.469999999999 3254.94 3518.3199999999997 6477.71 5509.27 4847.29 True False 4002.56538105757 4132.742033550013 3603.1800393037965 3197.7328153025496 5144.769022648055 5163.59021605667 3846.3204653742 4017.0526344031086 5010.519027777272 4264.72208064581 3643.574114601771 1.0985272304513107 1.1342549660202825 0.988913612286328 0.8776362754602701 1.4120116294684895 1.4171772149119661 1.0556449092005333 1.1025033409652922 1.3751659415125972 1.1704776536738373 1.0 11.83113862177693 -6.748043164351246 24.99801539088271 1.1978908564684205 1.0300832676709348 0.28288896715414225 0.14618703206664801 340.15203991931816 634737.0736548398 0.025622302924450564 0.05309953043334169 1.7863100254047874e-07 6.748043164351246 -0.1678075887974857 GKLPES(ph)PKRAEEIWQQSVIGDYLAR ddPTM_A549_PD325901_60min_R1 1 GKLPESPKRAEEIWQQSVIGDYLAR 25 3 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 GKLPES(1)PKRAEEIWQQSVIGDYLAR 80.418 6.1816e-07 8964200.0 741.66 642.43 653.17 818.99 782.99 897.35 908.34 706.17 1110.4 948.74 1069.2 True False 816.9527772187646 696.5698307082812 697.4980440302861 869.5771522387568 727.9954835688593 890.0422791154438 942.9073757627202 692.084885370352 1063.733749520016 888.8363944870191 937.6951782172315 0.8712349132177204 0.7428531647487154 0.7438430528739479 0.9273558960727702 0.7763668839088431 0.9491808210079671 1.005558520152997 0.7380702188169085 1.1344131592341258 0.9478948118053632 1.0 9.87297520383199 -7.915478587008897 0.7225772533343968 1.057077402374844 0.7994572550487666 0.25941636499020704 0.10779924108989536 0.4020188177863345 0.425636021631605 0.023393173267233985 0.039746240851387234 1.2148465172865405e-08 7.915478587008897 -0.2576201473260773 GKLS(ph)AEENPDDSEVPSSSGINSTK ddPTM_A549_MK2206_60min_R1 2 GKLSAEENPDDSEVPSSSGINSTK 24 1 A0A494C1S7;Q9Y5Q9-2;Q9Y5Q9 A0A494C1S7 GTF3C3 General transcription factor 3C polypeptide 3 1 GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK 175.28 8.8211e-42 485450000.0 8411.8 8424.2 7712.7 7482.7 10991.7 8620.400000000001 8707.1 8679.5 12541.0 12892.2 13625.0 True False 9831.506191235152 8852.955797332557 8806.476835000725 9315.96183591117 9374.835490616948 9532.60500624159 10289.067363472046 9909.845704853953 9700.483523861785 9979.843065978237 10241.536469129991 0.9599639879103344 0.8644167624669512 0.8598784822516798 0.9096254125532155 0.9153739303545468 0.9307787981788417 1.0046409925390904 0.9676131833074247 0.9471707251251757 0.9744478375934559 1.0 13.32214454899976 -7.38147719786153 1.980611542905871 0.9756870490507847 0.8950776987722769 0.6022571522381686 0.029409707498893975 0.1818472598988269 1.3972030671765172 0.0049708644612221735 0.008721069328817214 4.1545386360244604e-08 7.38147719786153 -0.0806093502785078 GKLS(ph)AEENPDDSEVPSSSGINSTK ddPTM_A549_PD325901_60min_R1 2 GKLSAEENPDDSEVPSSSGINSTK 24 1 A0A494C1S7;Q9Y5Q9-2;Q9Y5Q9 A0A494C1S7 GTF3C3 General transcription factor 3C polypeptide 3 1 GKLS(0.994)AEENPDDS(0.006)EVPSSSGINSTK;GKLS(0.999)AEENPDDS(0.001)EVPSSSGINSTK 175.95 7.763499999999999e-42 724960000.0 13135.5 11845.8 13908.8 13439.7 16115.400000000001 14785.6 15192.2 15450.300000000001 12784.099999999999 16058.3 16434.6 True False 14469.006290155989 12844.087138838722 14852.734808408895 14269.839745226709 14983.509899111863 14665.19097575005 15770.347484490832 15142.13164597412 12246.828734905284 15044.376197473373 14413.248387513022 1.0038685174322863 0.8911306315907419 1.0304918370293696 0.9900502205727228 1.0395650929108313 1.0174799310650402 1.094156366454736 1.0505703668503048 0.849692477756463 1.0437880339665229 1.0 13.815107899268467 -8.74225443039492 24.999132867982908 0.9290214336080025 1.0138270990460942 0.03376267817848422 0.06672721560277198 264.00908822524383 344019.40490493993 0.012056921250309537 0.013661243139187353 1.8102792340920496e-09 8.74225443039492 0.08480566543809176 GKNEES(ph)LESTEGFR ddPTM_A549_PD325901_60min_R1 1 GKNEESLESTEGFR 14 1 A0A087WWW8;Q9Y6J0-2;Q9Y6J0 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 GKNEES(0.996)LES(0.002)T(0.001)EGFR 66.38600000000001 0.0011822 7313100.0 2901.7 2855.7 2193.8 3252.9 2900.6 2761.7 2808.5 2867.8 3078.8 3136.7 3583.2 True False 3196.27844788136 3096.3598610800213 2342.68446039108 3453.8242451280894 2696.8718625267675 2739.209630838716 2915.3790043701706 2810.599479254424 2949.4087428154053 2938.6482266874277 3142.4891157762695 1.0171167918561919 0.9853207909409566 0.7454868971956268 1.0990727788964554 0.8581960869769237 0.8716687727212911 0.9277292289523181 0.8943863847115152 0.9385581410635471 0.9351339395049939 1.0 11.61769203244461 -10.091036948342811 0.8393331346618881 0.9954752392893189 0.923483682448035 0.014230190570038936 0.08877695336490196 0.9885315461050637 1.3889001742139837 0.03699554183226254 0.016180691775594155 8.108920668952819e-11 10.091036948342811 -0.07199155684128389 GKNS(ph)DEEAPK ddPTM_A549_PD325901_60min_R1 4 GKNSDEEAPK 10 1 Q9UNL4-8;Q9UNL4-3;Q9UNL4-4;Q9UNL4-7;Q9UNL4-5;Q9UNL4-6;Q9UNL4-2;Q9UNL4 Q9UNL4-8 ING4 Inhibitor of growth protein 4 1 GKNS(1)DEEAPK;GKNS(1)DEEAPK;GKNS(1)DEEAPK;GKNS(1)DEEAPK 104.9 9.2944e-05 108421400.0 28109.9 29751.8 27110.82 25366.93 29574.28 25202.129999999997 19948.96 22384.48 29331.25 31369.9 34205.9 True False 30963.59635458534 32259.088599951185 28950.7232758044 26933.787653622032 27497.084598527228 24996.89220901958 20708.128589289776 21938.00398611516 28098.559564669464 29389.199160379358 29998.791149065473 1.032161469464743 1.0753462844437358 0.965062996436984 0.8978290998389472 0.9166064213018738 0.8332633166719549 0.6902987685867095 0.7312962671430371 0.9366563947542531 0.9796794482265294 1.0 14.872616745657716 -5.93308275310705 3.7849811669185955 0.9152385081998488 1.053021932698229 0.2801943644301844 0.09741932517305026 0.2982212501349336 8.55061463072194 0.016419076265716936 0.056013778593437265 1.1665873072539877e-06 5.93308275310705 0.13778342449838032 GKPEAPKGS(ph)PQINR ddPTM_A549_PD325901_60min_R1 2 GKPEAPKGSPQINR 14 2 E9PC87;O94876;D6RBT7 E9PC87 TMCC1 Transmembrane and coiled-coil domains protein 1 1 GKPEAPKGS(1)PQINR;GKPEAPKGS(1)PQINR 55.688 0.0031848000000000002 49141000.0 8952.1 9347.9 9931.6 9962.900000000001 11627.0 9871.9 10241.6 10100.3 10758.3 9889.8 11521.2 True False 9860.91060181229 10135.680339457906 10605.618099562422 10578.285705612423 10810.359630972463 9791.506519418013 10631.349692418567 9898.84159296793 10306.16606399602 9265.356340196167 10104.165438904203 0.9759252915480474 1.003119000846162 1.04962831059035 1.0469232485923783 1.06989139244981 0.9690564330743878 1.0521749427700915 0.979679287005168 1.0199918168712925 0.916983831690012 1.0 13.302662545712797 -10.074951476765339 0.39350348942523533 0.9981587890811126 1.0230341915076335 0.1050468704304165 0.04122714167826692 4.21483855626683 1.1717078436665698 0.0425024461014521 0.011618881101784603 8.41489155031219e-11 10.074951476765339 0.024875402426520976 GKPES(ph)EGEAK ddPTM_A549_PD325901_60min_R1 2 GKPESEGEAK 10 1 D6RD44;Q96EI5;Q96EI5-2;D6RIH3;D6RCE9 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 GKPES(1)EGEAK;GKPES(1)EGEAK 88.18700000000001 0.00028547 3411800.0 1585.8 1248.8 1212.2 1381.9 1784.4 1254.8 971.61 1155.6 1238.0 1481.0 1484.9 True False 1746.7892485957407 1354.0407586639815 1294.4671815507645 1467.256824477391 1659.0698998458115 1244.581324827614 1008.5851502353927 1132.5506514493375 1185.9711652609678 1387.4894072509583 1302.2667135566478 1.3413452332088318 1.0397568674437916 0.9940108029141114 1.126694562030335 1.2739862599380207 0.9557038599477921 0.7744843200981654 0.8696764185550014 0.9106975959033287 1.0654418121934155 1.0 10.346809237711968 -7.391823470068216 7.68584002971554 0.9332921649466456 1.1378012358147853 0.49243045580387157 0.11367879971991479 0.1979078575821308 11.506442554790564 0.01667834553058326 0.026690513725887127 4.056733981111519e-08 7.391823470068216 0.20450907086813974 GKPKPRS(ph)PQPPSR ddPTM_A549_MK2206_60min_R1 2 GKPKPRSPQPPSR 13 3 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GKPKPRS(1)PQPPSR;GKPKPRS(1)PQPPSR 76.15100000000001 0.00017733 55569000.0 5346.1 6311.6 6277.2 6004.9 8140.299999999999 6616.3 6983.2 4955.5 10242.4 13649.900000000001 11775.6 True False 6248.390980403987 6632.833480976729 7167.401349548999 7476.100769570202 6942.872653390205 7316.432474455511 8251.957047995089 5657.957300582268 7922.51275375185 10566.378109732732 8851.393529973366 0.7059217239912717 0.7493547155615718 0.8097483549091017 0.8446241537283337 0.7843818749985119 0.8265853788649171 0.9322777278008924 0.6392165574180829 0.8950582444361944 1.1937530597811445 1.0 13.111688890198474 -14.999999999999986 0.09007526302150133 1.7161921939585414 0.629147019446379 0.5793621116745102 0.09402679799435895 69.688166527548 0.45801168780884033 9.385473040375917 0.7396391322836 1.0000000000000328e-15 14.999999999999986 -1.0870451745121623 GKPKPRS(ph)PQPPSR ddPTM_A549_PD325901_60min_R1 2 GKPKPRSPQPPSR 13 3 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GKPKPRS(1)PQPPSR;GKPKPRS(1)PQPPSR 81.428 0.00010635 86939000.0 4844.0 4394.5 4721.9 4617.3 5702.6 5288.1 5053.7 5109.6 5386.700000000001 4564.6 5284.0 True False 5335.759314035676 4764.839937499094 5042.3565290913675 4902.500134350862 5302.069048902002 5245.035466863965 5246.021318990748 5007.6850195963425 5160.315731753844 4276.390377000491 4634.10149803578 1.1514118359939465 1.0282122520447015 1.0880979907817365 1.0579181609269555 1.1441417610618472 1.1318343953163599 1.1320471338865445 1.0806161715963516 1.113552591358024 0.9228089585031942 1.0 12.178073927723103 -10.720153640126428 0.8270692272498943 0.9955462954234278 1.1021156126287786 0.5820436835472569 0.04358736640278658 0.4405628243481739 0.4991323841951087 0.030325525075606253 0.006669628622237829 1.9047867433677028e-11 10.720153640126428 0.10656931720535079 GKPLPEYHVR ddPTM_A549_MK2206_60min_R1 2 GKPLPEYHVR 10 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 ; 67.334 0.016521 2867400.0 1011.07 983.66 824.1500000000001 965.6199999999999 1304.23 1150.63 1042.21 982.48 1527.19 1247.05 1439.65 False True 1181.713897711801 1033.7240924484388 941.0268626506739 1202.1969433483284 1112.3794947030333 1272.3889028736223 1231.566066415247 1121.7495487188105 1181.2839034212968 965.3405388861606 1082.1451726813204 1.0920105061170038 0.9552545430546026 0.869593919934988 1.1109386926058598 1.027939247695204 1.1758024107993932 1.1380784182252497 1.0365980249575564 1.0916131525073778 0.8920619555084801 1.0 10.079678338224525 -6.2840137584844316 24.990780349622142 1.0624200925935456 0.9705831134257767 0.16676420054716912 0.08620182306442424 833.7337447396761 922976.6311549582 0.010380342050228584 0.024137282510685736 5.199795232790843e-07 6.2840137584844316 -0.0918369791677689 GKPLPEYHVR ddPTM_A549_PD325901_60min_R1 2 GKPLPEYHVR 10 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 ; 91.584 0.0022741999999999997 3952700.0 1334.62 1361.16 1241.44 1040.58 1647.13 1661.8 1635.1799999999998 1795.13 1608.76 1416.54 1955.07 False True 1470.1096399046844 1475.869730191435 1325.6915837851686 1104.8542632713531 1531.4412710900208 1648.2668517680333 1697.4076697048301 1759.3247238977572 1541.1494118135993 1327.099422651771 1714.608784209842 0.8574023727413526 0.8607617923009608 0.7731743800648371 0.6443768826137868 0.893172416468033 0.9613078312366272 0.9899679071614351 1.0260793832970603 0.8988344315078384 0.7739954646641739 1.0 10.743663724346142 -6.991715875922374 24.96993789272714 0.9596322576344293 0.7861644570640847 0.4326377694933433 0.08314133109636704 101.96816070725728 307348.76698794146 0.009812916791451989 0.01852278513146483 1.0192579888031662e-07 6.991715875922374 -0.1734678005703446 GKPPEADGVDRS(ph)FGEK ddPTM_A549_PD325901_60min_R1 1 GKPPEADGVDRSFGEK 16 2 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 GKPPEADGVDRS(1)FGEK 103.27 2.1913e-07 16715000.0 2567.6 2993.8 3486.0 3164.7 3749.1 3414.3 3409.0 3125.6 3644.7 3319.2 3698.7 True False 2828.2608618327813 3246.098032742012 3722.5809230209247 3360.1763314448217 3485.7761496928597 3386.495072807558 3538.7313604763804 3063.2574560142357 3491.5259337856633 3109.625145541783 3243.7833479910914 0.8719018992388479 1.000713575631478 1.147604671355859 1.0358818610761453 1.0746020235450178 1.043995455154195 1.0909271615405367 0.944347117976095 1.0763745784526582 0.9586414417805079 1.0 11.663461749958136 -5.321082503085404 3.855299070662377 1.043634589069337 0.8641973602008655 0.42889450338371227 0.05601641994645999 0.13560132560813684 3.568887606792514 0.006811834598122383 0.059795609392852125 4.774385658588724e-06 5.321082503085404 -0.17943722886847158 GKPPS(ph)PTPWSGSNMK ddPTM_A549_MK2206_60min_R1 1 GKPPSPTPWSGSNMK 15 1 Q9Y6R9;Q9Y6R9-2 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 GKPPS(0.773)PT(0.225)PWS(0.001)GS(0.001)NMK 45.70399999999999 0.011137000000000001 3044100.0 2321.2 2334.2 2545.9 2542.9 3127.8 2599.4 2092.2 2519.7 3477.0 3443.2 3330.0 True False 2712.9618121085896 2453.000809825699 2906.946902411391 3165.9106141551206 2667.704763371606 2874.466782657926 2472.3256581245437 2876.8751912576186 2689.4650516280553 2665.3787285937433 2503.0690966754396 1.083854143583942 0.9799972414200467 1.1613530390640752 1.2648115141368101 1.065773520561152 1.148376921146833 0.9877177028026397 1.1493391033745994 1.0744669634570558 1.0648442474615991 1.0 11.28948240151937 -9.951762043132993 0.4975388307761908 0.9942947523343411 1.1101708374395771 0.0911625700361377 0.0785779548380747 1.246024759421538 0.6028027754394943 0.06367329134608951 0.02155935426136054 1.1174753626293789e-10 9.951762043132993 0.11587608510523606 GKPSEQLT(ph)PTR ddPTM_A549_MK2206_60min_R1 1 GKPSEQLTPTR 11 1 Q14687-2;Q14687-3;Q14687;H0Y613 Q14687-2 GSE1 Genetic suppressor element 1 1 GKPSEQLT(0.994)PT(0.005)R 68.972 0.0015099 31370000.0 3095.8 3513.0 3124.0 2296.4 4567.6 3409.0 2751.2 3187.3 4402.3 4699.3 5052.3 True False 3618.2953549568188 3691.796694763808 3567.030175235945 2859.018103089315 3895.7120906631303 3769.7381172889445 3251.0574278903778 3639.109535696872 3405.1860790285264 3637.7248661944045 3797.67447361361 0.9527660625198067 0.9721203648218284 0.9392669645647117 0.7528339047893345 1.0258151712925079 0.9926438254466599 0.8560653237866623 0.9582468326291647 0.8966503323778516 0.9578822227838268 1.0 11.890900531531624 -10.932645736228986 1.1471152031189709 1.0006786877747595 0.9248596336252219 0.061638745651688365 0.07119771056459083 0.8239909372261351 1.8977825916613118 0.05027130556555865 0.011380296069915962 1.1677617981982706e-11 10.932645736228986 -0.0758190541495376 GKPSEQLT(ph)PTR ddPTM_A549_PD325901_60min_R1 1 GKPSEQLTPTR 11 1 Q14687-2;Q14687-3;Q14687;H0Y613 Q14687-2 GSE1 Genetic suppressor element 1 1 GKPSEQLT(0.996)PT(0.004)R 83.633 0.00023368 33025000.0 6109.5 6803.8 6757.0 6531.0 8550.2 7855.2 7250.8 7378.9 8754.0 8233.8 8297.0 True False 6729.731942423812 7377.180103938178 7215.570653141822 6934.405037022826 7949.663448588699 7791.2298555832585 7526.733161790006 7231.722050864932 8386.099822855025 7713.916462810899 7276.521599016436 0.9248556265308779 1.0138333273050888 0.9916236150686542 0.9529835021667696 1.0925087406685154 1.0707354811722671 1.0343861499438676 0.9938432742153119 1.1524874500459905 1.0601104329647817 1.0 12.829033247297291 -6.759755091209185 24.999930467843342 1.0657338464822137 0.9753817891724783 0.44228247978461643 0.0462881258410632 41.033441782691156 609039.7363821941 0.008762868190851012 0.017525614427862077 1.7387810915516727e-07 6.759755091209185 -0.09035205730973539 GKPSEQLTPT(ph)R ddPTM_A549_MK2206_60min_R1 1 GKPSEQLTPTR 11 1 Q14687-2;Q14687-3;Q14687;H0Y613 Q14687-2 GSE1 Genetic suppressor element 1 1 GKPS(0.001)EQLT(0.434)PT(0.565)R 41.378 0.035532 28312000.0 2208.9 2263.7 2316.5 1947.3 3050.8 2357.8 2446.2 2241.9 3575.1 3345.0 4019.5 True False 2581.708317579987 2378.912660955545 2645.014532949445 2424.3885874176194 2602.0313613703242 2607.3008310190285 2890.642875874323 2559.6961905308012 2765.3455582615657 2589.3621767966047 3021.3472174435215 0.854489117528329 0.7873681804001444 0.8754420934074216 0.8024197197265491 0.8612156015527416 0.8629596810210931 0.9567397150467889 0.8472035838028107 0.9152690370362104 0.8570223779137719 1.0 11.560976274785224 -9.522020128438577 0.18228053955707876 1.0747863845535075 0.7826567605343496 0.11118060959330323 0.055937722193785185 1.618871911870882 0.16645721139634145 0.1529133250631881 0.0818095461815042 3.0059369819079127e-10 9.522020128438577 -0.2921296240191579 GKQAFTQQIEELKR ddPTM_A549_MK2206_60min_R1 2 GKQAFTQQIEELKR 14 2 Q9UKX2;Q9Y623;P12882 Q9UKX2 MYH2;MYH4;MYH1 Myosin-2;Myosin-4;Myosin-1 0 ; 95.631 1.6424e-05 9625000.0 5051.7 6123.5 1790.02 1695.49 7128.0 5637.200000000001 2051.23 1930.8700000000001 5969.700000000001 6868.8 2204.44 False True 5904.303457792936 6435.159994416783 2043.8717523290152 2110.8851261134396 6079.4806424045055 6233.724762329489 2423.9119394488143 2204.5767355413736 4617.572481652001 5317.133309411218 1657.0167085511118 3.563212988332286 3.8835818378944764 1.233464781484411 1.273906964981173 3.66893140608122 3.762016840361393 1.4628168363904261 1.33044930939112 2.7866782862374313 3.208859199772642 1.0 10.694372434730381 -11.474601370095295 0.32635447523497146 2.009218005670963e-30 2.718958947902426 0.0 1.1946692274729818 6.4216359089900035 0.5845834040219462 6.6638293735401755 0.4170465486143899 3.3527303814044223e-12 11.474601370095295 2.718958947902426 GKQS(ph)PPGPGK ddPTM_A549_MK2206_60min_R1 2 GKQSPPGPGK 10 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 GKQS(1)PPGPGK;GKQS(1)PPGPGK 57.802 0.0034757 148403000.0 6170.4 6405.5 5891.6 5576.5 7242.6 5359.5 5486.9 6110.1 7888.299999999999 8858.8 8909.6 True False 7211.81266820388 6731.512589897404 6727.117471325255 6942.742750338596 6177.223134214203 5926.6387326518325 6483.798706416002 6976.225386396472 6101.612645026631 6857.590927296196 6697.100427549395 1.0768559836040608 1.0051383673755958 1.004482095512915 1.0366789068562745 0.9223727792409071 0.8849559293260456 0.9681501384903907 1.041678478897951 0.9110827455904428 1.0239641769573296 1.0 12.709320887062034 -6.748726247620286 24.995280664368227 0.9566489601771221 1.027077624880187 0.2928466563095441 0.048360331749598896 219.62025457814184 431792.32559988654 0.007070197735775485 0.014642733596166099 1.7835026229479346e-07 6.748726247620286 0.07042866470306486 GKQS(ph)PPGPGK ddPTM_A549_PD325901_60min_R1 2 GKQSPPGPGK 10 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 GKQS(1)PPGPGK;GKQS(1)PPGPGK 54.023 0.00558 213900000.0 11742.9 11336.900000000001 12720.7 11461.0 13496.9 13020.1 13692.6 12490.2 13972.4 13931.0 16069.4 True False 12935.030563333923 12292.300349854006 13584.003197783211 12168.919940180456 12548.924305777255 12914.068622400402 14213.679385878218 12241.07316262766 13385.18861832986 13051.39428252066 14092.965672319473 0.9178359519274291 0.8722294963080608 0.9638853534188383 0.8634747449986266 0.8904388613125676 0.916348547400879 1.0085655295248355 0.8685945490288687 0.9497779906340235 0.9260928172240849 1.0 13.782687618630233 -9.662089726799516 0.3093396575178569 1.0180811832177339 0.8972022736350614 0.07889322283537337 0.04648678964855402 1.3528111372613845 0.29292115168048777 0.0605021949169838 0.024570195599138683 2.1772598961686336e-10 9.662089726799516 -0.12087890958267244 GKRDS(ph)GSFEQYSENIK ddPTM_A549_MK2206_60min_R1 2 GKRDSGSFEQYSENIK 16 2 Q8IZT6;Q8IZT6-2;Q5VYL4 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 GKRDS(0.5)GS(0.5)FEQYSENIK;GKRDS(0.5)GS(0.5)FEQYSENIK 127.97 1.1759e-10 11844100.0 2266.58 2799.8 2286.55 2060.34 3127.7 2032.93 2277.7200000000003 1916.9499999999998 2995.6 2672.2 3333.2 True False 2649.1232914393804 2942.297861087307 2610.8171725946695 2565.123392492178 2667.6194732391355 2248.0533032502813 2691.5522407147673 2188.6835329131636 2317.1013829902236 2068.5481640764983 2505.4744483599316 1.0573339884481683 1.1743475823564344 1.0420450203767573 1.0238074446024754 1.0647162955444798 0.8972565274899703 1.0742684853468136 0.8735605084082428 0.9248154115109751 0.8256113589306638 1.0 11.290868109433216 -6.598094727618497 0.9367743437289607 0.960454356441695 1.1132927555854333 0.43965463002064364 0.07423023962230538 0.41893456085627895 0.6632514514480723 0.009812196080989585 0.04021782243543769 2.5229304149101236e-07 6.598094727618497 0.1528383991437383 GKRDS(ph)GSFEQYSENIK ddPTM_A549_PD325901_60min_R1 2 GKRDSGSFEQYSENIK 16 2 Q8IZT6;Q8IZT6-2;Q5VYL4 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 GKRDS(0.889)GS(0.111)FEQYSENIK;GKRDS(0.97)GS(0.03)FEQYSENIK 122.57 1.4076e-08 18500600.0 2498.8 2491.8 2876.0 3424.0 3494.4 3291.5 2574.1 2799.5 3458.5 2766.3999999999996 3458.5 True False 2752.476336480664 2701.7927309728607 3071.182654792936 3635.4927035317937 3248.9653990255597 3264.6951152933466 2672.058784101568 2743.661776334734 3313.1512722577218 2591.7290318832233 3033.1264252378382 0.9074716812256952 0.8907616604741437 1.0125468655834593 1.198595836059396 1.071160559609973 1.0763465341004868 0.8809585917250523 0.9045655840473559 1.0923221810636943 0.8544744493068721 1.0 11.566589917560673 -5.8126095634170465 5.285925013424741 1.0376180889087263 0.898560726293107 0.11185536451768419 0.09959338369982748 0.17837404920202246 10.643785614510538 0.012203085131631626 0.040914722538155646 1.5395380837955454e-06 5.8126095634170465 -0.1390573626156193 GKRPSGRDT(ph)PISEGPK ddPTM_A549_MK2206_60min_R1 1 GKRPSGRDTPISEGPK 16 3 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 GKRPS(0.166)GRDT(0.824)PIS(0.01)EGPK 44.586999999999996 0.022827 5865100.0 815.69 800.05 765.49 490.2 891.66 542.22 867.53 782.42 1059.2 899.58 1133.7 True False 953.3585302941825 840.7691277101574 874.0479925868635 610.2990220059143 760.4979951748592 599.5973605034941 1025.148971509792 893.3304310607556 819.2928911948337 696.364253214556 852.1710014717552 1.1187408731905566 0.9866202044637684 1.0256720670819885 0.7161696665949532 0.892424165879183 0.7036115515171839 1.2029850461225418 1.0482994956621563 0.9614184122433892 0.8171649258328308 1.0 9.7349991486545 -7.762419464249339 24.99999927764648 1.002447359098266 0.9068455582809907 0.10696522448412427 0.1419313220680945 47.21469183007405 1204370.5252644005 0.020344433785218472 0.028991133810974658 1.7281464189917238e-08 7.762419464249339 -0.09560180081727543 GKRPSGRDT(ph)PISEGPK ddPTM_A549_PD325901_60min_R1 1 GKRPSGRDTPISEGPK 16 3 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 GKRPS(0.222)GRDT(0.777)PIS(0.001)EGPK 45.347 0.018609999999999998 6568700.0 1167.8 1192.1 1248.6 1031.0 1267.0 1195.7 990.8 1135.1 1438.9 1443.3 1246.4 True False 1286.3541963110779 1292.5624506753143 1333.3375044417464 1094.6825284291128 1178.0102909127124 1185.9626156330723 1028.5054361865632 1112.459540031276 1378.4280369095372 1352.1697916848811 1093.1007015805822 1.1767938621309624 1.1824733520034503 1.2197755453946657 1.0014471007531542 1.077677737475929 1.0849527531344691 0.9409063910574601 1.0177100228942326 1.261025662975408 1.2370038640810448 1.0 10.094210599650582 -6.234431237569392 24.27867810798427 1.0926391144389929 1.1919601766267593 0.22091970527115745 0.09347193809287932 845.8473080163299 760363.1233310626 0.015601887634204666 0.04126362513041097 5.828660534586313e-07 6.234431237569392 0.09932106218776648 GKS(ph)DSEDGEKENEK ddPTM_A549_MK2206_60min_R1 3 GKSDSEDGEKENEK 14 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 GKS(0.991)DS(0.009)EDGEKENEK;GKS(0.999)DS(0.001)EDGEKENEK;GKS(0.986)DS(0.014)EDGEKENEK 113.47 1.6319999999999998e-06 87139000.0 20918.4 21656.9 19909.1 13646.3 4162.48 3444.0 2869.87 3730.32 4201.35 31042.6 28391.0 True False 24448.914514222077 22759.143705901035 22732.509750893056 16989.644112605685 3550.1847060039127 3808.4417940578214 3391.288230801014 4259.104283625876 3249.7509331773185 24030.055099977963 21340.731148261988 1.1456455893833433 1.0664650403861426 1.0652170065290578 0.7961134974510627 0.16635721997243022 0.17845882447040645 0.1589115296584955 0.1995763057055682 0.15227926871858755 1.1260183605253373 1.0 14.381321984292013 -6.502263309366125 4.138005168339432 0.4684430633884655 1.077995553794549 0.44568607938751703 0.32601501277255107 0.19220749985783908 7.529166126757704 0.05478591865385639 0.12658945076411904 3.145840437207817e-07 6.502263309366125 0.6095524904060834 GKS(ph)DSEDGEKENEK ddPTM_A549_PD325901_60min_R1 5 GKSDSEDGEKENEK 14 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 GKS(0.979)DS(0.021)EDGEKENEK;GKS(0.805)DS(0.195)EDGEKENEK;GKS(0.936)DS(0.064)EDGEKENEK;GKS(0.986)DS(0.014)EDGEKENEK;GKS(0.998)DS(0.002)EDGEKENEK 133.16 2.3253000000000002e-09 173780000.0 32935.5 35848.0 36662.6 32305.899999999998 43629.9 30625.899999999998 30215.2 33788.9 35152.8 38698.399999999994 37635.3 True False 36279.08771416639 38869.03676856692 39150.744506123614 34301.362070977724 40565.48633898387 30376.49282438478 31365.055970391844 33114.95388262072 33675.450063154894 36254.976419689745 33006.39668982322 1.0991532355106255 1.1776213300057474 1.1861562737078437 1.0392337701483718 1.2290189298818956 0.9203213883007924 0.9502720416634439 1.0032889743711702 1.0202704154476203 1.098422731823621 1.0 15.010458027607882 -7.262953094739155 24.999998988194715 0.9987515774841662 1.1442534434718363 0.5851445952137576 0.061819922491207054 64.01602536761573 1057268.0093070639 0.0077112242452389524 0.012739777923706314 5.45816807954134e-08 7.262953094739155 0.14550186598767012 GKS(ph)EEELEASK ddPTM_A549_MK2206_60min_R1 1 GKSEEELEASK 11 1 Q7RTP6;A0A5F9ZHV5;J3QR21 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GKS(1)EEELEASK 52.887 0.0060966 7420600.0 2690.4 3678.2 3342.5 2915.0 4108.3 3213.7 3747.3 3850.4 4988.7 4305.5 4925.1 True False 3144.4737460352176 3865.4046691375556 3816.5167607958206 3629.1751308593225 3503.9745122321033 3553.7716009185874 4428.135904163132 4396.205991355454 3858.7674153169028 3332.884559700384 3702.061744155018 0.8493844682628146 1.0441221503775377 1.0309165607033728 0.9803118860967751 0.9464927260503789 0.9599439032937369 1.1961269719918834 1.1875020718647877 1.0423292970219362 0.9002779505129791 1.0 11.85411324179478 GKS(ph)EEELEASK ddPTM_A549_PD325901_60min_R1 2 GKSEEELEASK 11 1 Q7RTP6;A0A5F9ZHV5;J3QR21 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GKS(1)EEELEASK;GKS(1)EEELEASK 114.63 6.2588e-06 31471000.0 10439.5 9401.7 9546.6 9559.1 12361.1 10095.7 9943.4 11213.3 11336.099999999999 9911.099999999999 12172.6 True False 11499.310354846288 10194.014254269017 10194.489684369357 10149.543896708758 11492.898979479973 10013.483966418671 10321.801528237256 10989.641934836325 10859.683139349645 9285.311454561088 10675.447368469024 1.0771736263541165 0.9549027691690031 0.954947304080181 0.9507371022863572 1.0765730542989114 0.9379919754927062 0.966872972342471 1.0294315128465066 1.0172578969781425 0.8697819523691496 1.0 13.382008908669034 -8.26078156462022 24.99479814418697 1.0099734168644072 0.9858749472349047 0.0 0.0621952278145342 137.89561528956324 5239748.904888619 0.007017738263371287 0.008786416992720772 5.485527989815707e-09 8.26078156462022 -0.024098469629502572 GKS(ph)GFNSK ddPTM_A549_MK2206_60min_R1 2 GKSGFNSK 8 1 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;A0A0G2JNQ3;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 1 GKS(1)GFNSK;GKS(0.999)GFNS(0.001)K 67.153 0.0022706 16985100.0 9960.2 10189.599999999999 10366.1 9434.5 16756.3 12922.3 11925.1 14155.1 17257.9 16228.3 16887.5 True False 11641.238256489729 10708.207116699485 11836.16885387751 11745.952923530804 14291.470466936396 14289.72920887148 14091.736309005351 16161.628773175662 13349.013205203291 12562.315758956154 12693.867678710649 0.9170757527285145 0.8435732424293828 0.9324320335974814 0.9253249853258178 1.1258562660854852 1.1257190929158107 1.1101215693810262 1.2731839642759883 1.0516111829014423 0.9896365770398627 1.0 13.631844088661154 -6.653480810689133 5.8212843171188835 1.0641232392825415 0.8984266853973144 0.5609183115870255 0.07860039290340357 0.15551157147724057 7.460844799500184 0.012733905520523557 0.02673351149043925 2.2208498095786877e-07 6.653480810689133 -0.16569655388522708 GKS(ph)GFNSK ddPTM_A549_PD325901_60min_R1 1 GKSGFNSK 8 1 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;A0A0G2JNQ3;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 1 GKS(1)GFNSK 61.435 0.0030210999999999997 11230000.0 10904.0 10517.0 10413.0 9957.1 10945.0 12040.0 10601.0 11195.0 11926.0 12402.0 13048.0 True False 12010.966052899468 11403.304499414711 11119.688798455785 10572.12745278517 10176.260958200184 11941.950231849283 11004.426856089785 10971.706942692397 11424.791693782161 11618.935603461437 11443.178718086829 1.0496179731873982 0.9965154595891181 0.9717307640122982 0.9238803057471351 0.8892862035018134 1.0435867975193036 0.9616582181572012 0.958798880362741 0.9983931890991438 1.015359096428059 1.0 13.482200243188158 -8.7862631835587 21.03769981853687 0.9992412793484483 0.9723960722002802 0.08034053664838359 0.04414420938331646 81.25182629033766 68858.18773901451 0.007657411854900041 0.008156130453507309 1.6358249069507624e-09 8.7862631835587 -0.02684520714816807 GKS(ph)PASVFR ddPTM_A549_PD325901_60min_R1 2 GKSPASVFR 9 1 K7EM84;L7N2F3;Q32NC0-2;Q32NC0 K7EM84 C18orf21 UPF0711 protein C18orf21 1 GKS(0.974)PAS(0.026)VFR;GKS(0.976)PAS(0.024)VFR 72.958 0.00067335 10223600.0 2601.1 2634.8 2621.3999999999996 2749.8 3347.4 3156.8 2931.5 3082.3 2922.8 3334.0 3659.9 True False 2865.161757171384 2856.843842831404 2799.3039677587626 2919.648900751089 3112.29017190309 3131.0920674337053 3043.0598366783515 3020.8211084824275 2799.9648803107907 3123.490671016002 3209.7555020176283 0.8926417465038583 0.8900502985462952 0.872123738396629 0.9096172275164945 0.9696346559564203 0.975492390453268 0.9480659304939292 0.9411374500592217 0.8723296458408604 0.9731241738047024 1.0 11.648247691211882 GKS(ph)PPRPGNSQPPDVFVSSVAETTSQATASEVQTNR ddPTM_A549_PD325901_60min_R1 1 GKSPPRPGNSQPPDVFVSSVAETTSQATASEVQTNR 36 2 Q6PIF2 Q6PIF2 SYCE2 Synaptonemal complex central element protein 2 1 GKS(0.499)PPRPGNS(0.499)QPPDVFVSSVAETTSQATASEVQTNR 60.216 0.00021888 2078900.0 430.58 724.44 650.57 660.78 722.66 760.43 491.58 682.04 705.99 828.75 693.26 True False 474.2921646237572 785.4911012224015 694.721592395216 701.5948798597373 671.902854641658 754.237310199763 510.28734590289775 668.4361771499707 676.3196954463579 776.4225835646399 607.9934149372227 0.7800942460416769 1.291940145936459 1.142646573675388 1.1539514452342863 1.1051153485125067 1.2405353276361397 0.8392974880420153 1.099413514567405 1.1123799679905908 1.2770246592963643 1.0 9.247911887968487 GKS(ph)SEPVVIMK ddPTM_A549_MK2206_60min_R1 2 GKSSEPVVIMK 11 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 GKS(0.798)S(0.202)EPVVIMK;GKS(0.787)S(0.213)EPVVIMK 77.192 0.00026468 14389500.0 3548.5 4468.2 4439.0 3550.5 5018.8 3540.4 4045.9 3716.3 6122.9 5562.5 6005.1 True False 4147.4000475044495 4695.612294774733 5068.516948742753 4420.372659388 4280.541168364158 3915.042778072681 4780.987659022123 4243.096905691432 4736.072926262129 4305.927386675972 4513.867937671376 0.9188128905791646 1.0402635521492716 1.1228766589386552 0.9792871037490724 0.9483089065677035 0.8673365796546502 1.0591775667873324 0.9400135237187222 1.0492271798065462 0.9539329564208127 1.0 12.140148494850305 -11.789297098692076 5.715530596941254 0.9995527014852552 1.0075391847938813 0.0 0.07217246158472411 2.711247533198169 195.21562950340947 0.07321454171102626 0.009752963937701259 1.6244371062229894e-12 11.789297098692076 0.007986483308626058 GKS(ph)SEPVVIMK ddPTM_A549_PD325901_60min_R1 2 GKSSEPVVIMK 11 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 GKS(0.867)S(0.133)EPVVIMK;GKS(0.837)S(0.163)EPVVIMK 56.599 0.0044975 22060000.0 1820.0 1909.3 2343.2 1894.1 2226.4 1872.9 2112.6 1954.6 2811.6 1938.1 2025.8 True False 2004.7650601868131 2070.203411688934 2502.223642806263 2011.09425518679 2070.025344663033 1857.6477233580167 2192.996149059077 1915.613969645963 2693.4382296023755 1815.7280352417852 1776.639442604255 1.1284028779909132 1.1652355351597754 1.4084026183379241 1.13196533126545 1.1651353082810791 1.045596353886536 1.234350705309409 1.0782232588723768 1.5160297385125299 1.022001421166375 1.0 10.794935210178242 GKS(ph)SFFSDR ddPTM_A549_MK2206_60min_R1 2 GKSSFFSDR 9 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8YF89;A0A087WX09;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 GKS(0.928)S(0.071)FFS(0.002)DR;GKS(0.972)S(0.028)FFSDR 78.903 0.00050071 29163000.0 5707.1 10883.0 9157.0 5494.9 10483.099999999999 7306.5 6793.5 8487.2 10711.3 9985.0 11476.8 True False 6670.318954801364 11436.898214948624 10455.600292777062 6841.150746675434 8941.049876878598 8079.66898033783 8027.791013511655 9690.286590959911 8285.20765243129 7729.381565116328 8626.793816433841 0.7732095024798856 1.325741458334335 1.2119914437805837 0.7930119685535084 1.0364279090391737 0.9365784267321017 0.9305648406965402 1.1232778709165554 0.9604040421886707 0.8959738379735048 1.0 13.074608760106168 -6.23325264720948 24.96705667348385 0.9781018502116382 1.1258568515598333 0.14511328661852896 0.14832127365019307 908.8710751447757 805052.9849459735 0.01813729023836391 0.047976697262505565 5.844499863019006e-07 6.23325264720948 0.14775500134819508 GKS(ph)SFFSDR ddPTM_A549_PD325901_60min_R1 5 GKSSFFSDR 9 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8YF89;A0A087WX09;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 GKS(0.399)S(0.399)FFS(0.201)DR;GKS(0.561)S(0.438)FFSDR;GKS(0.951)S(0.047)FFS(0.003)DR;GKS(0.962)S(0.037)FFS(0.001)DR;GKS(0.915)S(0.084)FFS(0.001)DR 59.155 0.0027578000000000004 70370900.0 13901.400000000001 15247.899999999998 17960.1 17084.699999999997 19901.6 18197.899999999998 17608.899999999998 18985.7 16170.9 17484.2 21509.899999999998 True False 15312.659894330205 16532.894045509696 19178.980388854867 18139.98311683109 18503.780272792777 18049.702335894504 18279.016325459812 18607.01531950648 15491.29330881955 16380.244628127757 18864.31866249049 0.8117261040960708 0.8764108760727967 1.0166802592764745 0.9616028779719642 0.9808878127989537 0.9568170819646005 0.968973046548748 0.9863603161297511 0.8211954847657547 0.8683189104888254 1.0 14.20337237368119 -5.527070908523902 24.37252255205053 0.937793798153362 0.8278972564552338 0.35248262112181294 0.056321174826761605 80.18169815247283 466170.7104104704 0.009909681718268932 0.03874057082733484 2.971180878784418e-06 5.527070908523902 -0.10989654169812813 GKS(ph)SPICSTTGDDK ddPTM_A549_MK2206_60min_R1 2 GKSSPICSTTGDDK 14 1 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.499)S(0.499)PICS(0.001)TTGDDK;GKS(0.495)S(0.495)PICS(0.007)T(0.002)TGDDK 54.368 0.005043 8777600.0 2774.4 3137.1000000000004 3015.4 2751.5 4055.6000000000004 3556.1 3244.0 3209.3999999999996 4505.3 4382.299999999999 4904.1 True False 3242.6508924323925 3296.7649903625233 3443.029062229981 3425.617623519529 3459.0266124208333 3932.4041416518635 3833.392808983855 3664.3422783752844 3484.856743485731 3392.3353863604657 3686.27662372553 0.8796547908429108 0.8943346706929044 0.9340126674352205 0.9292893543234511 0.9383524259025827 1.066768596893194 1.0399091550296196 0.9940497288757245 0.9453595319072299 0.9202606675057411 1.0 11.847948621692222 -7.013758059965739 20.65949883570631 0.9871546856163578 0.9129913197415329 0.4959876282343413 0.040138980003153836 49.08882313382443 73715.30337917827 0.006093779823560691 0.010870757284698362 9.68817422045997e-08 7.013758059965739 -0.07416336587482486 GKS(ph)SPICSTTGDDK ddPTM_A549_PD325901_60min_R1 1 GKSSPICSTTGDDK 14 1 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.628)S(0.372)PICSTTGDDK 129.11 3.0577e-09 11942000.0 3978.7 4002.2 4318.7 3894.1 4665.8 4101.4 3612.3 4119.5 3873.7 4478.2 4915.2 True False 4382.614695035866 4339.479439722123 4611.792952452799 4134.629712857231 4338.090304136177 4067.999558214836 3749.7680532264067 4037.3333408147682 3710.9018601546136 4195.445687745609 4310.661560019959 1.016691900770696 1.0066852568453624 1.0698573497919066 0.959163612194618 1.0063630010693976 0.9437065521321047 0.8698822677252919 0.936592512448617 0.860865973467291 0.9732718816659276 1.0 12.073693582310069 -7.055099209709332 1.6388670784933304 0.9279829030389365 1.0208555288289742 0.45375028081796964 0.04430217750173609 0.3236200043146149 1.7169697549849388 0.008774176288970854 0.018490554328406638 8.808476302493738e-08 7.055099209709332 0.09287262579003774 GKS(ph)SPICSTTGDDKLCADSACQQNTVTSSGDLVAK ddPTM_A549_MK2206_60min_R1 1 GKSSPICSTTGDDKLCADSACQQNTVTSSGDLVAK 35 2 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.531)S(0.42)PICS(0.015)T(0.015)T(0.018)GDDKLCADSACQQNTVTSSGDLVAK 144.8 3.1108999999999997e-40 24530000.0 1495.6 1968.5 1477.5 1160.6 1697.9 1313.7 1492.2 1334.8 1797.7 2049.7 2021.8 True False 1748.0207160906452 2068.6882418566893 1687.0317170009953 1444.947052101314 1448.1411591945287 1452.7148620365167 1763.3134246503419 1524.0119876535587 1390.523820337001 1586.6713464215254 1519.73126115868 1.1502169895208394 1.3612197726849886 1.1100855527014437 0.9507911622477592 0.9528929200880101 0.9559024672091905 1.1602797611111513 1.0028167654402365 0.9149800730405665 1.044047317426246 1.0 10.569600514599715 -6.011448510559085 4.186654705043239 0.9759459430844897 1.255664078443746 0.6065476577258919 0.07878474053819548 0.08559929948577771 3.5562437613716393 0.010793671769162573 0.03330319272849884 9.739832527879259e-07 6.011448510559085 0.2797181353592564 GKS(ph)SPICSTTGDDKLCADSACQQNTVTSSGDLVAK ddPTM_A549_PD325901_60min_R1 2 GKSSPICSTTGDDKLCADSACQQNTVTSSGDLVAK 35 2 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.424)S(0.361)PICS(0.072)T(0.072)T(0.072)GDDKLCADSACQQNTVTSSGDLVAK;GKS(0.509)S(0.405)PICS(0.028)T(0.028)T(0.028)GDDKLCADSACQQNTVTSSGDLVAK 132.59 4.9905e-30 66321000.0 2822.8 3154.1 4220.5 2849.0 2984.0 2828.2 2943.4 3433.1 1757.71 2626.0 3562.6 True False 3109.36857796447 3419.9070763149116 4506.92850992823 3024.976259451543 2774.4141342411467 2805.1680768867213 3055.4126976902835 3364.6241272851526 1683.839561301178 2460.1939118440355 3124.4227851821083 0.9951817637199952 1.094572441519172 1.4424835625008225 0.9681712327146631 0.8879765399865495 0.8978196197360085 0.9779126922837997 1.0768786296279182 0.5389282043668858 0.7874074928373185 1.0 11.609373971437641 -7.020236593763373 0.890100792754812 0.8085814759160751 1.163608328933174 0.2871400048765421 0.17689941679771978 0.5787438524409331 0.8822439889538156 0.037599648171137805 0.10923059664843092 9.544724694517397e-08 7.020236593763373 0.3550268530170989 GKS(ph)SPVLK ddPTM_A549_MK2206_60min_R1 1 GKSSPVLK 8 1 Q8IXZ2;A0A0J9YYE2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 GKS(0.567)S(0.433)PVLK 45.358999999999995 0.014057 14335000.0 4285.7 5081.0 4700.6 3749.1 6294.2 5090.6 4785.2 5090.4 6227.2 6438.6 6692.0 True False 5009.021384694892 5339.601197294309 5367.215762392475 4667.629668303497 5368.331517876325 5629.283913133205 5654.60889936792 5811.979788696186 4816.749142795002 4984.115788198094 5030.19171019581 0.9957913481790351 1.0615104761258602 1.0670002400730658 0.9279228182978737 1.067222051794792 1.119099278407835 1.124133875038294 1.1554191417626791 0.957567707217167 0.9908401260523882 1.0 12.296397669599099 -8.80167786634713 24.99888534780966 0.9799625060622579 1.0640397089665083 0.2716228373469287 0.05971553430195613 147.30949646038184 91518.04922858858 0.0109813157301719 0.01169057766734088 1.5787818814057e-09 8.80167786634713 0.08407720290425047 GKS(ph)SPVLK ddPTM_A549_PD325901_60min_R1 2 GKSSPVLK 8 1 Q8IXZ2;A0A0J9YYE2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 GKS(0.629)S(0.371)PVLK;GKS(0.621)S(0.379)PVLK 60.518 0.0031414000000000004 24941000.0 5814.4 5467.0 5853.9 6888.799999999999 7120.1 5921.700000000001 6053.9 6959.7 6220.9 6706.3 6607.1 True False 6404.673607664948 5927.723276438168 6251.180856360353 7314.305530400068 6620.008739011526 5873.475638533381 6284.284477321194 6820.883323720974 5959.457206762489 6282.863073495681 5794.468585857717 1.105308193972529 1.0229968785930912 1.0788186636505912 1.2622909973576775 1.1424703820413602 1.0136349091387764 1.0845316329195307 1.1771369924014048 1.0284734688712356 1.084286329350368 1.0 12.500460641544832 -8.915000671506911 7.939061317620176 1.0124775799837142 1.1088407285184083 0.1603565638013703 0.0691529098858818 0.22869045810658795 18.67827971647462 0.011890593536229484 0.012618949190719663 1.2161841201788333e-09 8.915000671506911 0.09636314853469408 GKS(ph)TGSLLTPTR ddPTM_A549_PD325901_60min_R1 1 GKSTGSLLTPTR 12 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 GKS(0.914)T(0.047)GS(0.018)LLT(0.013)PT(0.009)R 41.553999999999995 0.026016 7591400.0 2337.9 2855.4 2709.5 2632.0 2803.9 2659.9 2777.3 2923.1 2968.5 3605.8 3653.2 True False 2575.241886928985 3096.0345790271717 2893.3829635471025 2794.5726622943 2606.963736929879 2638.238656287034 2882.9916712968757 2864.7964773724098 2843.74426823682 3378.129172630321 3203.8795595428273 0.8037886066155543 0.9663392526119039 0.9030873070521943 0.8722464781706922 0.813689681050893 0.8234512587806182 0.899843960335469 0.8941648473768463 0.8875939982720835 1.0543870672567848 1.0 11.645604199538479 -10.446559950821879 0.5574859553790487 1.012790832155991 0.8713745754274048 0.598712384781724 0.047457985466828355 0.6858772739695795 0.3415829151033437 0.04842247762640207 0.010460523576900947 3.5763502856117064e-11 10.446559950821879 -0.14141625672858626 GKS(ph)VFLEQMK ddPTM_A549_PD325901_60min_R1 1 GKSVFLEQMK 10 1 Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;H0Y503 Q7L1Q6-2 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 GKS(1)VFLEQMK 81.64699999999999 0.00030764 2715700.0 1492.9 1646.0 1303.1 1561.3 1501.5 1672.1 1353.3 1405.5 2013.4 1606.8 1910.8 True False 1644.4581089851076 1784.7141966375027 1391.5362021768697 1657.7379550304297 1396.039819893794 1658.482971982988 1404.8005720541755 1377.4661999065795 1928.783799787104 1505.3463737817958 1675.783713559192 0.9813068928164053 1.065002710192805 0.8303793567854829 0.9892314513008156 0.8330668263440448 0.9896760295280236 0.8382946800876372 0.8219832838576664 1.1509741884831701 0.8982939514220455 1.0 10.710620243060179 -8.765605486859089 24.999534560739146 1.0712933648373042 0.9197491587127317 0.09899085199731228 0.09893061157137018 82.75094167048637 496561.595805246 0.0157083865619075 0.01701541465933774 1.7155149738439683e-09 8.765605486859089 -0.15154420612457253 GKSDFLT(ph)PK ddPTM_A549_PD325901_60min_R1 2 GKSDFLTPK 9 1 O60870-2;O60870 O60870-2 KIN DNA/RNA-binding protein KIN17 1 GKS(0.018)DFLT(0.982)PK;GKS(0.001)DFLT(0.999)PK 51.773999999999994 0.010034 7767300.0 3344.5 3223.8 3457.8999999999996 3646.2 3689.2000000000003 3933.8999999999996 3859.1 3634.3 3767.8999999999996 3803.6 4328.1 True False 3684.0311779092285 3495.480939927082 3692.573888041897 3871.4174928789807 3430.0833190490744 3901.8636226803887 4005.960162280549 3561.811035446804 3609.548266225204 3563.4400468735653 3795.7711380864207 0.9705619869817746 0.9208882234373262 0.972812573179386 1.0199291137533375 0.9036591496868533 1.0279501794851238 1.055374525109038 0.938362958637816 0.9509393835701332 0.9387921234550559 1.0 11.890177293906929 -5.958169250096583 12.972098472663623 0.980531041559337 0.9459810251113325 0.07789372773975944 0.044025287622144305 2.2003774962198324 677.5196604457262 0.0057824692319979444 0.017980591397286232 1.1011101092663847e-06 5.958169250096583 -0.034550016448004484 GKSETILS(ph)PPPEK ddPTM_A549_MK2206_60min_R1 2 GKSETILSPPPEK 13 1 Q9P0M6 Q9P0M6 H2AFY2 Core histone macro-H2A.2 1 GKS(0.005)ET(0.004)ILS(0.99)PPPEK;GKS(0.006)ET(0.005)ILS(0.989)PPPEK 55.864 0.0047051 9707000.0 2539.4 3120.5 3127.2 3325.3 4409.4 2737.9 2740.0 3444.3 4339.3 4194.0 4684.0 True False 2967.988637630774 3279.320121266855 3570.683983353985 4139.99864927839 3760.7831010968607 3027.622760729067 3237.8225328655244 3932.540072726363 3356.455478438201 3246.5724871404964 3520.833528176505 0.8429789746884006 0.9314044799400858 1.0141587083792907 1.175857539456732 1.0681513542177126 0.8599164761695282 0.919618183294921 1.1169343967146006 0.9533127458532703 0.9221033772709917 1.0 11.781701300061961 -7.82923069301294 0.0021847523624519164 1.4753217053935126 0.4937215115997046 0.0 0.09987043357989218 657928.6420257366 724.991502887652 162224.4940987138 163504.04919378262 1.4817307950493803e-08 7.82923069301294 -0.9816001937938079 GKSETILS(ph)PPPEK ddPTM_A549_PD325901_60min_R1 2 GKSETILSPPPEK 13 1 Q9P0M6 Q9P0M6 H2AFY2 Core histone macro-H2A.2 1 GKS(0.002)ET(0.002)ILS(0.996)PPPEK;GKS(0.002)ET(0.002)ILS(0.996)PPPEK 60.317 0.0022789999999999998 8593500.0 3081.7 4331.1 3486.2 3750.6 4118.6 3986.5 3850.3 4644.1 4615.1 3946.6 3929.1 True False 3394.5519153723653 4696.096996996775 3722.7944962236197 3982.266043769378 3829.3237443986554 3954.0352657198646 3996.825273465005 4551.469782274032 4421.143396442564 3697.4110024690294 3445.845608617028 0.9851143379388814 1.3628286146231399 1.080371821335821 1.155671639440526 1.1112870915698205 1.1474789398085643 1.1598967938291087 1.3208571419718191 1.2830358346255004 1.0730054165000635 1.0 11.750642347608457 -10.990508954994509 1.3030979293066063 1.0013345911042428 1.1916060788693927 0.19417224361284546 0.10628585123614266 0.42347195216124683 1.2941083116391978 0.0697850581802233 0.016466092803935097 1.0220944851656651e-11 10.990508954994509 0.1902714877651499 GKSETILS(ph)PPPEKR ddPTM_A549_PD325901_60min_R1 2 GKSETILSPPPEKR 14 2 Q9P0M6 Q9P0M6 H2AFY2 Core histone macro-H2A.2 1 GKS(0.004)ET(0.061)ILS(0.935)PPPEKR;GKS(0.012)ET(0.04)ILS(0.948)PPPEKR 74.793 0.0001849 35619000.0 7343.900000000001 7336.9 8361.5 7496.599999999999 9506.2 9544.7 7680.200000000001 8319.4 9087.2 8431.5 8052.400000000001 True False 8089.447321706561 7955.20631185279 8928.961671784127 7959.647955986115 8838.517306609656 9466.971127735203 7972.474213766695 8153.463040556961 8705.29658558923 7899.133651071213 7062.005848369285 1.145488618304462 1.1264797116657383 1.2643662244836498 1.127108661036313 1.251559046591641 1.3405498849765551 1.1289248954116415 1.1545534251348304 1.2326946157371712 1.1185396643214665 1.0 12.78586230052169 -10.809100462823105 0.824485711107557 0.9864781536601506 1.2000538930789095 0.2910233818432473 0.07460025045731863 0.44740422862949536 0.4818633526560457 0.0634475178404085 0.012295355524954794 1.5520279468082478e-11 10.809100462823105 0.21357573941875896 GKSS(ph)EPVVIMK ddPTM_A549_PD325901_60min_R1 2 GKSSEPVVIMK 11 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 GKS(0.362)S(0.638)EPVVIMK;GKS(0.403)S(0.597)EPVVIMK 84.17299999999999 0.00012332 25600000.0 2872.3 2888.2 2966.4 3248.6 3223.6 2849.2 3144.5 2960.8 3182.8 3270.4 3566.0 True False 3163.893781524497 3131.5987501387813 3167.7177424122992 3449.258643894097 2997.185456816275 2825.9970598492505 3264.1656682364232 2901.744521297334 3049.0379844851454 3063.9063858700456 3127.4046067364834 1.0116675580477867 1.0013410939515992 1.012890284675344 1.1029141021485787 0.9583619114585576 0.9036237440342718 1.043729890659288 0.9278442946099543 0.9749419623919032 0.979696192577813 1.0 11.610750164101269 GKSS(ph)PICSTTGDDK ddPTM_A549_PD325901_60min_R1 1 GKSSPICSTTGDDK 14 1 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.162)S(0.837)PICS(0.001)TTGDDK 141.07 1.8363e-13 10815000.0 4295.5 4183.9 5085.1 4059.5 4724.1 4808.4 4235.1 4452.1 4086.8 4484.9 5065.1 True False 4731.57599782003 4536.491936398325 5430.205465190393 4310.246095206577 4392.295513260256 4769.241984619937 4396.269048035641 4363.299372895115 3915.0460082298255 4201.72264860218 4442.124810314352 1.0651605256190888 1.0212436908267095 1.2224342397092887 0.9703117943013306 0.9887825535792251 1.0736397981312995 0.9896770657654113 0.9822550151593651 0.8813453415670176 0.9458812680917987 1.0 12.117034213497437 -7.501841818051396 0.8432196390935083 0.94560013485804 1.0765081045366356 0.35207353157158994 0.06700973248832172 0.4918106330953528 0.6988467194975816 0.013631751704720033 0.02886430318387306 3.148895019093666e-08 7.501841818051396 0.13090796967859564 GKSS(ph)PICSTTGDDKLCADSACQQNTVTSSGDLVAK ddPTM_A549_MK2206_60min_R1 1 GKSSPICSTTGDDKLCADSACQQNTVTSSGDLVAK 35 2 Q12802;Q12802-2;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 GKS(0.164)S(0.81)PICS(0.009)T(0.009)T(0.009)GDDKLCADSACQQNTVTSSGDLVAK 184.5 5.123299999999999e-77 19134000.0 1428.9 1525.4 1476.5 1079.3 1423.1 1340.1 1084.0 1212.4 1825.1 1802.6 1911.5 True False 1670.0633867490785 1603.0363444898135 1685.8899019641083 1343.7285484516187 1213.7638751691702 1481.9084925136133 1280.948768476725 1384.2614128192795 1411.7177640858115 1395.391408039928 1436.821795283815 1.1623316073230858 1.1156820906751113 1.1733465538300072 0.9352089123802527 0.8447560296991569 1.031379463603482 0.8915154076039747 0.9634189969576894 0.9825280829672794 0.9711652569721053 1.0 10.488665424395395 -6.259430173337742 24.999984849886175 0.9717037816156681 1.1469762927805334 0.7311745515877461 0.05251514799692729 78.02905574378956 970882.4171434399 0.007552726660241139 0.018935513719039364 5.50262385592956e-07 6.259430173337742 0.1752725111648653 GKT(ph)PEEIR ddPTM_A549_MK2206_60min_R1 4 GKTPEEIR 8 1 E7ERH2;F8W8N3;E5RJR5;P63208-2;P63208 E7ERH2 SKP1 S-phase kinase-associated protein 1 1 GKT(1)PEEIR;GKT(1)PEEIR;GKT(1)PEEIR;GKT(1)PEEIR 73.95100000000001 0.0020259 40542000.0 8481.6 8388.7 7954.0 7124.4 10361.7 9713.3 7672.9 9240.1 11730.5 9848.900000000001 10977.8 True False 9913.086724788993 8815.64899896531 9081.99680340163 8869.878319826468 8837.507656060994 10741.154958833285 9066.96661037368 10549.912471619447 9073.56047975925 7624.026649641882 8251.709288133228 1.2013373688582303 1.06834216901498 1.1006200638287678 1.0749140584220809 1.070991154374549 1.3016884846246493 1.0987985996323055 1.2785123788584338 1.099597690966637 0.9239330159880915 1.0 13.010477279910186 -9.801487508581749 1.100644442286643 1.016900082784877 1.1422677941322357 0.381633583381077 0.0838289506781598 0.38614137497303563 0.9547633576218234 0.023847138872909998 0.015043852935943628 1.5794740367916397e-10 9.801487508581749 0.12536771134735858 GKT(ph)PEEIR ddPTM_A549_PD325901_60min_R1 2 GKTPEEIR 8 1 E7ERH2;F8W8N3;E5RJR5;P63208-2;P63208 E7ERH2 SKP1 S-phase kinase-associated protein 1 1 GKT(1)PEEIR;GKT(1)PEEIR 83.081 0.0013529000000000002 91268000.0 9239.099999999999 9311.5 9711.1 9799.099999999999 11235.3 8878.7 9531.5 10742.6 9991.6 10396.3 11433.1 True False 10177.046630534065 10096.212783712088 10370.153643588208 10404.368151629205 10446.17128768082 8806.394810923603 9894.226448336927 10528.330415593333 9571.68779872496 9739.875843756343 10026.901180392286 1.014974262480555 1.006912564716938 1.0342331550915407 1.037645426482816 1.041814524721598 0.8782768127948247 0.9867681221078746 1.0500083950345096 0.9546007910641924 0.9713744723846263 1.0 13.291588188646278 GKT(ph)PEEIRK ddPTM_A549_MK2206_60min_R1 2 GKTPEEIRK 9 2 E7ERH2;F8W8N3;E5RJR5;P63208-2;P63208 E7ERH2 SKP1 S-phase kinase-associated protein 1 1 GKT(1)PEEIRK;GKT(1)PEEIRK 75.89 0.00070349 276420000.0 17754.4 18864.0 19317.1 16996.0 24376.0 18618.6 19718.0 18844.0 28307.0 26923.0 28350.0 True False 20750.90866659519 19824.097025341427 22056.55524905578 21160.020762979446 20790.322690691937 20588.80789397356 23300.505366073874 21515.19470732967 21895.509696990335 20841.07560116444 21309.91257980441 0.9737678927064678 0.9302758493776692 1.0350373407894204 0.9929660989333658 0.9756174556246235 0.9661610678537345 1.093411588565406 1.0096331754884722 1.0274800337632966 0.9779991130003841 1.0 14.379237054277699 GKT(ph)PEEIRK ddPTM_A549_PD325901_60min_R1 4 GKTPEEIRK 9 2 E7ERH2;F8W8N3;E5RJR5;P63208-2;P63208 E7ERH2 SKP1 S-phase kinase-associated protein 1 1 GKT(1)PEEIRK;GKT(1)PEEIRK;GKT(1)PEEIRK;GKT(1)PEEIRK 96.756 0.00030477 467869000.0 45857.7 43348.5 49525.7 46424.6 53737.0 48339.2 50469.5 53320.7 54616.2 50706.2 56259.0 True False 50513.139945345545 47001.630226573994 52886.81182422758 49292.14210408357 49962.69850258595 47945.541582010665 52390.144440470096 52257.17680922002 52320.87104695159 47504.601878425754 49339.49965518447 1.0237870326688194 0.9526166774096012 1.071895989903302 0.9990401696119364 1.0126308303034441 0.9717476244608142 1.0618296660202364 1.059134713047885 1.060425651103129 0.9628107745400311 1.0 15.590455465097413 -7.769816588162387 24.997820317992925 1.0343111235886828 1.0059699369145574 0.07362644356166825 0.03944942215721673 300.831537319233 897690.1126869958 0.0056443391162294895 0.007865189211610241 1.69896100850277e-08 7.769816588162387 -0.02834118667412544 GKTANS(ph)PGSGARPDPVR ddPTM_A549_MK2206_60min_R1 3 GKTANSPGSGARPDPVR 17 2 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 GKT(0.01)ANS(0.897)PGS(0.093)GARPDPVR;GKT(0.009)ANS(0.83)PGS(0.161)GARPDPVR;GKT(0.047)ANS(0.944)PGS(0.009)GARPDPVR 89.48299999999999 2.1588e-06 41458000.0 3313.0 4729.9 3922.2 3699.91 5999.7 3685.1 3034.1600000000003 2749.3900000000003 6507.1 6536.8 6923.5 True False 3872.153404926657 4970.631706963659 4478.426937679389 4606.388116095271 5117.152077754528 4075.0548360285975 3585.4275971968086 3139.124452153745 5033.252239703455 5060.132339995234 5204.20387112084 0.7440433735530625 0.955118559929345 0.8605402571815199 0.8851282982315571 0.9832727933950899 0.7830313602128244 0.6889483359968002 0.6031901381829735 0.9671512424088478 0.9723163168289607 1.0 12.345461764414546 -8.96383042365001 24.99951723562973 0.9855080949009346 0.8198812111465593 0.331122497179722 0.10552382600847432 146.3897590585339 101181.56594862853 0.019368127626264296 0.020553493740283438 1.0868499165154221e-09 8.96383042365001 -0.1656268837543753 GKTANS(ph)PGSGARPDPVR ddPTM_A549_PD325901_60min_R1 4 GKTANSPGSGARPDPVR 17 2 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 GKT(0.059)ANS(0.767)PGS(0.174)GARPDPVR;GKT(0.048)ANS(0.917)PGS(0.035)GARPDPVR;GKT(0.187)ANS(0.684)PGS(0.129)GARPDPVR;GKT(0.033)ANS(0.921)PGS(0.046)GARPDPVR 97.488 3.4726e-07 107496000.0 7085.99 6425.55 7664.5 7701.540000000001 8320.25 10237.5 9813.1 9409.78 8709.7 8785.880000000001 10206.6 True False 7805.3544883698705 6967.05364896969 8184.659060382641 8177.246634333607 7735.864343304257 10154.12919423231 10186.54289043437 9222.094556070395 8343.661597797625 8231.138037392335 8951.252904968203 0.8719845781630942 0.778332790162009 0.9143590452952032 0.9135309571909201 0.8642214029066958 1.1343807735112115 1.1380019086244948 1.0302574012797545 0.9321222052799617 0.9195515001954437 1.0 13.12787391489111 -7.13651811807711 19.209292346867024 0.9970791694646163 0.868496700171097 0.5006244577745873 0.07528391506885959 2.6618483158616426 399.51414999661625 0.012239126982744635 0.02119890677072897 7.30267346642176e-08 7.13651811807711 -0.12858246929351924 GKYGQFSGLNPGGRPIT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 GKYGQFSGLNPGGRPITPPR 20 2 P62136-3;P62136;P62136-2 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 1 GKYGQFSGLNPGGRPIT(1)PPR;GKYGQFSGLNPGGRPIT(1)PPR 78.428 9.2094e-05 28150000.0 4580.0 5250.1 6278.1 6099.8 7888.799999999999 6662.6 5782.9 6332.5 10172.0 8737.8 8299.3 True False 5352.99202975071 5517.307665009811 7168.428983082199 7594.251273830428 6728.367970230166 7367.631909724055 6833.578074929943 7230.1512674679025 7868.058241346158 6763.924911334344 6238.35476097251 0.8580775276262456 0.8844171061778003 1.1490896651034155 1.2173484139344688 1.0785484679908244 1.1810216302247452 1.0954135083309438 1.1589836654850292 1.2612393079292576 1.0842481985234038 1.0 12.606949882475575 -5.748851054725241 8.219917584865573 1.1346346185688245 0.8698539957605816 0.6904540882384506 0.06842514508529768 0.08511774821478736 35.14527218613101 0.013016392346327083 0.04743274802563506 1.7829901554241705e-06 5.748851054725241 -0.2647806228082429 GKYGQFSGLNPGGRPIT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 GKYGQFSGLNPGGRPITPPR 20 2 P62136-3;P62136;P62136-2 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 1 GKYGQFSGLNPGGRPIT(1)PPR;GKYGQFSGLNPGGRPIT(1)PPR 80.813 6.634100000000001e-05 49437000.0 7109.6 6748.1 8332.5 8249.4 9115.400000000001 10661.1 8646.099999999999 9885.3 12280.4 8531.3 8652.0 True False 7831.361358189109 7316.786069459013 8897.993557392954 8758.946702253266 8475.16575042284 10574.27953627644 8975.132066827457 9688.129936632175 11764.297494241353 7992.632262039232 7587.8588495468475 1.0320910698881547 0.9642754582731828 1.172661976695092 1.1543370634492438 1.116937718329985 1.3935788403480835 1.182828021025122 1.2767936421498876 1.5504106925953065 1.0533448790387763 1.0 12.889477126438253 -6.221866231055017 0.9352302950424949 1.2666422153419126 0.9835734076152526 0.20839217401082766 0.1501114459203997 1.0008529832821071 1.3740496683147763 0.031905534452818914 0.2036214781469371 5.999758489860338e-07 6.221866231055017 -0.28306880772666 GLAAEDS(ph)GGDSK ddPTM_A549_MK2206_60min_R1 2 GLAAEDSGGDSK 12 0 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GLAAEDS(1)GGDSK;GLAAEDS(0.999)GGDS(0.001)K 157.28 8.1251e-14 57350000.0 20163.5 19773.9 17573.3 16012.7 24228.0 23254.0 19955.3 23387.0 26957.0 23560.0 25305.0 True False 23566.605849755095 20780.307048844315 20065.458187731696 19935.812218837407 20664.09329463752 25714.72284524408 23580.919704412932 26702.178869683696 20851.282541483324 18237.779636869374 19021.070117529125 1.2389737120014594 1.0924888515969426 1.0549069039622592 1.0480909904467093 1.0863791136332674 1.3519072631747637 1.2397262382562597 1.4038210628894081 1.096220265875974 0.9588198520998091 1.0 14.21531079345683 -9.138078008868773 3.3174184296380838 1.0367428764173399 1.1831863478791282 0.3016318852413098 0.11527971792387036 0.24723558511286195 5.664726466612276 0.0232924550025277 0.022545178497685073 7.276490909701739e-10 9.138078008868773 0.14644347146178838 GLAAEDS(ph)GGDSK ddPTM_A549_PD325901_60min_R1 2 GLAAEDSGGDSK 12 0 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GLAAEDS(0.999)GGDS(0.001)K;GLAAEDS(1)GGDSK 159.65 6.2661e-14 63692000.0 38683.0 34893.0 36024.0 34403.0 38449.0 31927.0 32228.0 31349.0 34311.0 35707.0 38275.0 True False 42610.06968308053 37833.55556699416 38468.805269909884 36527.99517511808 35748.47488184918 31666.99709736312 33454.45417583827 30723.719602185258 32869.02798971657 33452.45392620524 33567.41764521562 1.2693877775597602 1.1270916329301428 1.1460162255106587 1.088197953181675 1.064975425267616 0.9433849643145438 0.9966347286356283 0.9152839794503622 0.9791944181443879 0.9965751396123032 1.0 15.034773933750786 -6.135270487782515 0.7712900527425718 0.9809977622526377 1.2535715993487189 0.8487280768660069 0.03847743605804815 0.3028677730917597 0.24459154899540317 0.00631131036472225 0.054882633796713085 7.323682566348659e-07 6.135270487782515 0.2725738370960812 GLAAEDS(ph)GGDSKDLSEVSETTESTDVK ddPTM_A549_MK2206_60min_R1 1 GLAAEDSGGDSKDLSEVSETTESTDVK 27 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GLAAEDS(0.998)GGDS(0.002)KDLSEVSETTESTDVK 146.58 3.0460999999999997e-33 9669600.0 2154.7 3038.2 2390.6 2129.7 2880.6 2738.7 2969.1 2934.4 2964.8 3380.3 3298.7 True False 2518.3606826427617 3192.8314027985775 2729.6230271827953 2651.476595605866 2456.8675559077465 3028.5074161980715 3508.5470373470885 3350.3601862231067 2293.2775338127303 2616.68788227969 2479.5417505114933 1.0156556880412522 1.2876699503607645 1.1008578607800066 1.0693413793330582 0.9908554898907955 1.221398032750743 1.4149981691670754 1.351201360304571 0.9248795804062023 1.0553110798557457 1.0 11.275857802309812 -8.785541660389713 24.9999315136756 0.9645264370292747 1.181368520633792 0.28199398633008177 0.1314909466242734 187.13052375431187 194098.98312825753 0.02374946373853133 0.025289453154223054 1.6385448737194189e-09 8.785541660389713 0.2168420836045174 GLAAGSAET(ph)LPANFR ddPTM_A549_MK2206_60min_R1 2 GLAAGSAETLPANFR 15 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GLAAGS(0.217)AET(0.783)LPANFR;GLAAGS(0.001)AET(0.999)LPANFR 228.38 3.1126e-54 36566000.0 9019.3 9410.7 9560.599999999999 10062.8 13286.1 12652.400000000001 11465.9 11482.400000000001 20235.8 20626.5 20492.3 True False 10541.537339286142 9889.664433650374 10916.436841664783 12528.186451736263 11331.73228999024 13991.268570016611 13549.10561298643 13110.065363375199 15652.42360993241 15966.9593242736 15403.49635129193 0.6843600374146223 0.6420402360676317 0.7086986352127252 0.8133339448407434 0.735659750978538 0.9083177124811102 0.8796123492995168 0.8511097133006186 1.0161604387058267 1.0365801997242277 1.0 13.910970236713347 -7.251606263588564 0.47029884996635973 1.0166304947238052 0.6309041690075656 0.8749314239495986 0.046937499976220806 0.27464601654159737 0.10966331748600505 0.012826292382850712 0.04381842901005858 5.602653143394779e-08 7.251606263588564 -0.38572632571623955 GLAAGSAET(ph)LPANFR ddPTM_A549_PD325901_60min_R1 3 GLAAGSAETLPANFR 15 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GLAAGS(0.01)AET(0.99)LPANFR;GLAAGSAET(1)LPANFR;GLAAGS(0.002)AET(0.998)LPANFR 225.86 4.3630000000000003e-54 52056000.0 14623.4 16597.6 17026.2 18360.9 18643.199999999997 17195.2 16990.6 20168.0 19479.6 21279.0 19909.6 True False 16107.9568028219 17996.33800128226 18181.700318857955 19495.01109237059 17333.765947548443 17055.1679922504 17637.18658061306 19765.73341851007 18660.940154133725 19935.44030850315 17460.84541735298 0.9225187221927669 1.0306681933852468 1.0412840778481764 1.116498693299009 0.9927220322517579 0.9767664499967793 1.0100992339743657 1.1320032304315828 1.0687306203162457 1.1417225129712714 1.0 14.091835792462678 GLAEVQQDGEAEEGAT(ph)SDGEK ddPTM_A549_MK2206_60min_R1 1 GLAEVQQDGEAEEGATSDGEK 21 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.603)S(0.397)DGEK 137.62 4.7232e-18 42631000.0 1446.4 1786.5 1362.5 1550.7 1867.8 1562.7 1390.7 1688.3 1706.4 1828.4 1978.7 True False 1690.5169589151583 1877.425219241542 1555.7229877589539 1930.6215696135687 1593.0490942596982 1728.0638767636935 1643.372188487622 1927.6216952019058 1319.9031245608605 1415.3631701210497 1487.3341806581655 1.1366086928541383 1.2622753135484024 1.045980794356871 1.2980415529475982 1.0710767727766146 1.1618531324271737 1.104911196057101 1.2960246058144829 0.8874287579249914 0.9516107331673992 1.0 10.538513119417416 -8.772325744264956 24.999996812144044 0.9468413476057836 1.1691485028527464 0.5882238337246048 0.08409353032557847 100.60511561840237 231033.94890836484 0.014044882926103426 0.015023388704733421 1.6891734852349838e-09 8.772325744264956 0.22230715524696276 GLAEVQQDGEAEEGAT(ph)SDGEKKR ddPTM_A549_MK2206_60min_R1 2 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.5)S(0.5)DGEKKR;GLAEVQQDGEAEEGAT(0.5)S(0.5)DGEKKR 146.57 1.1154000000000001e-27 23832800.0 2572.17 3084.47 3154.23 2955.46 4128.700000000001 2568.94 2841.8999999999996 2784.63 4973.2 4508.9 4535.3 True False 3006.289412481196 3241.4563481634254 3601.547243801047 3679.5478326756406 3521.3736992558183 2840.783525675638 3358.236443850561 3179.359830071718 3846.778140568491 3490.33635843295 3409.059842087725 0.88185293064264 0.9508358604166777 1.0564634857202864 1.0793438669654645 1.0329456983363812 0.8333040947547369 0.9850916673243144 0.9326207157820564 1.1283985376486396 1.0238413287269992 1.0 11.735158209198746 -8.750240825665616 24.957330880512078 1.0606326460659812 0.9731786554456634 0.1866063368437738 0.07482890718873089 264.26820011217416 588952.5951344221 0.014176591493021471 0.016000193256659193 1.7772935890719352e-09 8.750240825665616 -0.08745399062031778 GLAEVQQDGEAEEGAT(ph)SDGEKKR ddPTM_A549_PD325901_60min_R1 5 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.5)S(0.5)DGEKKR;GLAEVQQDGEAEEGAT(0.631)S(0.369)DGEKKR;GLAEVQQDGEAEEGAT(0.539)S(0.461)DGEKKR;GLAEVQQDGEAEEGAT(0.5)S(0.5)DGEKKR;GLAEVQQDGEAEEGAT(0.5)S(0.5)DGEKKR 227.24 2.1191999999999992e-87 1592677900.0 19948.2 21373.0 22223.6 23440.9 24291.6 25225.199999999997 23295.499999999996 25281.8 23493.3 24243.8 27463.100000000002 True False 21973.32657891131 23174.177718550014 23731.82713736311 24888.79115485353 22585.441817470586 25019.774334588394 24182.023000286725 24777.53466581157 22505.958301151455 22713.042330527212 24085.312802934604 0.9123122775567206 0.9621705106410918 0.9853236007992213 1.0333596810011547 0.9377267383763739 1.0387979819610202 1.0040153183038727 1.0287404140664773 0.9344266559996381 0.943024594131898 1.0 14.555866040294438 -5.325401687634962 2.6534250614155677 0.982346043529845 0.9035381694239732 0.26402970328024633 0.03641160417638423 0.46969873735400614 4.693053505804093 0.0053180980749576705 0.07593236975945977 4.727138342404363e-06 5.325401687634962 -0.07880787410587176 GLAEVQQDGEAEEGATS(ph)DGEK ddPTM_A549_MK2206_60min_R1 1 GLAEVQQDGEAEEGATSDGEK 21 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.203)S(0.797)DGEK 140.21 1.9272000000000003e-19 37808000.0 1682.8 1463.4 1732.8 1197.6 2086.5 1444.3 1759.5 1344.3 2270.9 2163.6 2008.9 True False 1966.8154994900617 1537.8808093132232 1978.537095918324 1491.012053762307 1779.5786139698366 1597.1348673512514 2079.1783746630995 1534.858641746088 1756.5447758821263 1674.8412573145392 1510.034687180567 1.3024969003608549 1.0184407168716425 1.310259368685439 0.9874025189091664 1.178501811301132 1.057680913498293 1.3769076911373463 1.0164393273719232 1.1632479642979765 1.1091409167836321 1.0 10.560365974906885 -10.850344220922944 0.5772689927516899 0.9687446060190951 1.1568655666132068 0.06244842984899246 0.1286433987754521 1.7556631182344782 0.7614899840481908 0.18009416079229748 0.024102505487991456 1.4114184138071673e-11 10.850344220922944 0.18812096059411176 GLAEVQQDGEAEEGATS(ph)DGEK ddPTM_A549_PD325901_60min_R1 2 GLAEVQQDGEAEEGATSDGEK 21 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.235)S(0.765)DGEK;GLAEVQQDGEAEEGAT(0.201)S(0.799)DGEK 158.97 4.7604999999999995e-28 85941000.0 7584.2 8487.599999999999 7803.4 7490.1 9172.8 6496.2 7778.9 7103.6 8338.4 8396.4 10406.7 True False 8354.142400807055 9202.879839234787 8332.985649656186 7952.746465748686 8528.534172442092 6443.297101008244 8074.930296277412 6961.913125333604 7987.966045567096 7866.24987106141 9126.741873506608 0.9153477239295791 1.0083422941925415 0.9130296183619959 0.8713675236980426 0.9344555034693146 0.7059799861012886 0.884754976988839 0.7628037717975638 0.8752264670434928 0.8618902539465706 1.0 13.155884213673337 -4.16860373523353 16.46046469636538 0.9091625628972074 0.8912642421095047 0.0 0.08887968503739047 0.0 0.0 0.012684568398291822 0.0 6.782600924834166e-05 4.16860373523353 -0.017898320787702704 GLAEVQQDGEAEEGATS(ph)DGEKK ddPTM_A549_MK2206_60min_R1 2 GLAEVQQDGEAEEGATSDGEKK 22 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.144)S(0.856)DGEKK;GLAEVQQDGEAEEGAT(0.138)S(0.862)DGEKK 200.12 7.345699999999999e-61 51070000.0 4929.299999999999 6019.3 4180.5 4398.7 7409.4 6422.6 5550.0 6424.5 8629.2 6407.9 6340.9 True False 5761.24533018562 6325.656659490974 4773.357761707383 5476.381697465144 6319.487075172828 7102.23526902316 6558.363159636372 7335.192549206087 6674.699978000811 4960.350939520173 4766.279530062851 1.2087510381728805 1.3271686269327052 1.0014850643148154 1.148984582822596 1.3258742034144806 1.4901004492553347 1.3759921377397455 1.5389765755323546 1.4004004456517458 1.0407175886838433 1.0 12.218647849033253 -3.9884050895011978 16.191626879647913 1.2451145249455617 1.2134693528636251 0.0 0.18405742602566025 0.0 0.0 0.027828405467449358 0.0 0.0001027057859854848 3.9884050895011978 -0.03164517208193662 GLAEVQQDGEAEEGATS(ph)DGEKK ddPTM_A549_PD325901_60min_R1 2 GLAEVQQDGEAEEGATSDGEKK 22 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.16)S(0.84)DGEKK;GLAEVQQDGEAEEGAT(0.142)S(0.858)DGEKK 234.45 2.3739e-89 73705000.0 14224.7 14034.0 14483.6 15413.3 16039.2 13021.1 14806.2 15355.5 14990.400000000001 16420.3 17413.5 True False 15668.781072329335 15216.694432327287 15466.54419296209 16365.344534855907 14912.661924236134 12915.060478731952 15369.658043263527 15049.222506343278 14360.405618520213 15383.51945569407 15271.749893271393 1.0259977528333455 0.9963949474468303 1.0127552049406283 1.0716089936796531 0.9764867830114563 0.8456830794761916 1.006411062954565 0.9854288219435705 0.9403248297595084 1.0073187135203099 1.0 13.898577760459746 -6.973791859362481 23.455243401666625 0.9650485128430898 1.0235948642692625 0.2903656952488869 0.04588763474251437 118.07620640002658 105672.14894823694 0.00664702231827633 0.012561280108658585 1.0622045089857739e-07 6.973791859362481 0.058546351426172705 GLAEVQQDGEAEEGATS(ph)DGEKKR ddPTM_A549_MK2206_60min_R1 5 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.067)S(0.933)DGEKKR;GLAEVQQDGEAEEGAT(0.066)S(0.934)DGEKKR;GLAEVQQDGEAEEGAT(0.12)S(0.88)DGEKKR;GLAEVQQDGEAEEGAT(0.143)S(0.857)DGEKKR;GLAEVQQDGEAEEGAT(0.189)S(0.811)DGEKKR 222.13 6.281799999999999e-88 1987724000.0 25461.6 32693.0 29330.800000000003 26881.0 42056.5 26711.1 27403.999999999996 26094.2 43702.700000000004 41397.600000000006 43427.799999999996 True False 29758.895603646393 34356.934056906655 33490.34848393418 33466.846206733964 35870.04456190869 29537.650872606806 32382.952076878402 29793.132760135984 33804.108228871264 32045.853408118124 32643.4787136942 0.9116337098950884 1.0524899738241944 1.0259430000603678 1.025223031535985 1.0988425858810482 0.9048561010201258 0.9920190296168863 0.9126825306041151 1.0355547129445544 0.9816923523740327 1.0 14.9945071885614 -7.222264440904826 24.98824714090534 0.9994449026688086 1.0247806743926202 0.06200436353560779 0.058158121967721986 1644.9871971847424 1049274.7095340102 0.00851453754441132 0.014747420599165496 5.994259760230586e-08 7.222264440904826 0.02533577172381163 GLAEVQQDGEAEEGATS(ph)DGEKKR ddPTM_A549_PD325901_60min_R1 6 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.192)S(0.808)DGEKKR;GLAEVQQDGEAEEGAT(0.17)S(0.83)DGEKKR;GLAEVQQDGEAEEGAT(0.241)S(0.759)DGEKKR;GLAEVQQDGEAEEGAT(0.002)S(0.998)DGEKKR;GLAEVQQDGEAEEGAT(0.151)S(0.849)DGEKKR;GLAEVQQDGEAEEGAT(0.056)S(0.944)DGEKKR 293.01 6.924899999999998e-157 2027408000.0 28004.0 30056.8 30304.1 32070.7 35293.5 36922.799999999996 32890.4 36360.2 36144.0 34947.8 37396.2 True False 30846.94546454481 32589.792020348785 32360.71845935696 34051.6343011557 32814.606315965124 36622.112958515325 34142.062170317484 35634.96728697488 34624.99337414575 32741.189943771133 32796.70447404344 0.9405501546339283 0.9936910596045277 0.9867064078029077 1.0382639002069691 1.0005458427061125 1.1166400266679066 1.0410211244650758 1.086541097907497 1.0557461162462005 0.9983073137633006 1.0 15.00126323470324 -5.678432646824967 1.0498035036310478 1.038052305345746 0.9336251457123116 0.43736940707943894 0.03579533186645913 0.8282592740420378 1.096254871473189 0.005731681949852696 0.08141566801167048 2.0968499480217576e-06 5.678432646824967 -0.10442715963343441 GLAGPPAS(ph)PGK ddPTM_A549_MK2206_60min_R1 4 GLAGPPASPGK 11 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK 121.02 1.1017e-05 201589000.0 28898.2 31849.0 28832.2 28000.0 39694.0 32104.399999999998 30194.0 32292.3 43588.0 47615.6 47031.6 True False 33775.509666843216 33469.97806192215 32921.039506542205 34860.00125696776 33855.06518232386 35501.66629882402 35679.85896253343 36869.83241602111 33715.38759573302 36859.20288952957 35352.355713874036 0.9553962949515133 0.9467538268966572 0.9312261896488652 0.9860729378010571 0.957646654619891 1.0042234974709587 1.0092639724297316 1.0429243446866412 0.9536956424802381 1.0426236709047418 1.0 15.109518732165135 -6.273517461437165 23.343462775646195 0.9853745424250584 0.944688277609372 0.3384225695791334 0.02985170488882549 283.7685444181791 548444.1853932061 0.003960613889049902 0.009279025042106091 5.326998059269811e-07 6.273517461437165 -0.04068626481568638 GLAGPPAS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 GLAGPPASPGK 11 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GLAGPPAS(1)PGK;GLAGPPAS(1)PGK 115.14 2.1536e-05 340290000.0 14818.7 13909.0 13207.3 14814.900000000001 18647.9 13135.0 13435.400000000001 14453.8 17006.5 16048.1 16926.4 True False 16323.083515049633 15081.160243639739 14103.626799946722 15729.9827259209 17338.135835762576 13028.03291489537 13946.691499132985 14165.507620213253 16291.775946696816 15034.820227214128 14844.560105290087 1.0996003518644282 1.0159385078891854 0.9500872171295044 1.0596462686903925 1.1679790921917494 0.8776301097836257 0.9395153106734949 0.9542558027815965 1.097491325518699 1.0128168245185143 1.0 13.857646721555756 -8.7624280553118 24.999998943513905 1.0460375660321382 1.0068251537863755 0.02116928498138404 0.08007168977090288 74.1793990138299 1875691.9940412103 0.014510100354540522 0.01589846204971024 1.728112233738167e-09 8.7624280553118 -0.03921241224576266 GLAGPPAS(ph)PGKAQPPKPER ddPTM_A549_MK2206_60min_R1 2 GLAGPPASPGKAQPPKPER 19 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GLAGPPAS(1)PGKAQPPKPER;GLAGPPAS(1)PGKAQPPKPER 58.903999999999996 0.00089617 64280000.0 2752.3999999999996 3273.4 3276.6 3123.5 4775.3 2838.5 2953.1000000000004 2196.13 4704.4 4506.0 5349.5 True False 3216.937830280752 3440.0020781781495 3741.2711498649473 3888.757640219245 4072.8596958016574 3138.8681859561925 3489.6400444544443 2507.4381528660533 3638.8609113830944 3488.0914704470874 4021.0715113108913 0.8000200496886992 0.8554938822902679 0.9304164671881879 0.9670948724190903 1.012879200070203 0.7806049151642429 0.8678383447393112 0.6235746232845819 0.9049480719622431 0.867453229975 1.0 11.973364278123464 -9.74192150676942 1.4225438326980742 0.9793954714480877 0.8632682526335121 0.03398688249703563 0.10489939151935714 0.45004023652681546 1.8360902876575014 0.027123870562828317 0.019207994391178766 1.8116674990009354e-10 9.74192150676942 -0.11612721881457555 GLAGPPAS(ph)PGKAQPPKPER ddPTM_A549_PD325901_60min_R1 1 GLAGPPASPGKAQPPKPER 19 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GLAGPPAS(1)PGKAQPPKPER 159.74 2.6718e-27 62595000.0 6289.4 7280.0 7824.6 8180.0 8873.9 12158.0 9753.3 10747.0 9853.0 9685.2 10365.0 True False 6927.895257988435 7893.511149162219 8355.624409142152 8685.260021872102 8250.62787729307 12058.989278972045 10124.467168710542 10532.6426541416 9438.912674730465 9073.674819113425 9090.170709148528 0.7621303801276322 0.8683567560747824 0.9191933437215746 0.9554562064638769 0.9076427870589354 1.3265965695050852 1.113781852140695 1.1586848026452727 1.0383647322740548 0.9981853047029687 1.0 13.150091672473051 -6.123751458428274 1.1028665106230457 1.0533551449800693 0.7889554150443571 0.5012165355081102 0.10366767314436216 0.48203516402099283 0.9525337617430981 0.01669062984657116 0.10281213665539353 7.520531619765793e-07 6.123751458428274 -0.26439972993571226 GLAPNT(ph)PGK ddPTM_A549_MK2206_60min_R1 2 GLAPNTPGK 9 0 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 GLAPNT(1)PGK;GLAPNT(1)PGK 134.75 4.8675e-05 364790000.0 22661.0 22057.0 21608.0 19550.0 30470.0 22025.0 21559.0 22103.0 31212.0 29952.0 30823.0 True False 26485.62279174251 23179.60708693574 24672.33931706091 24339.750877632843 25987.903363364945 24355.670880988244 25475.99123578387 25236.167937598602 24142.53183532209 23185.82239743257 23168.798428476584 1.1431591013882378 1.0004665178685257 1.0648950740033343 1.0505400594152976 1.1216767862861383 1.0512271905759638 1.099581893054563 1.089230760736432 1.0420277905153985 1.0007347799674868 1.0 14.499895605183845 -9.440032779085803 1.0223421927050802 1.008731195704965 1.0745815140779131 0.37509158776410345 0.03716206878653286 0.33958299888865967 0.7452174035918266 0.009616256724637576 0.007216136014119845 3.630506518946793e-10 9.440032779085803 0.06585031837294819 GLAPNT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 GLAPNTPGK 9 0 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 GLAPNT(1)PGK;GLAPNT(1)PGK 134.2 4.9163000000000003e-05 651150000.0 17152.0 17549.3 18141.699999999997 17650.6 20999.0 16957.6 18347.8 19477.2 19546.2 19312.1 20877.9 True False 18893.258413364958 19028.241100273695 19372.9048569044 18740.83747457893 19524.102682617257 16819.502927874364 19046.03556930141 19088.711966432198 18724.74118774148 18092.730710176398 18310.05065591242 1.03185178284934 1.0392238371077018 1.0580475838633892 1.023527341718599 1.0663052249018663 0.9185940139626676 1.040195678713283 1.0425264421793583 1.0226482460164663 0.9881311117145464 1.0 14.160348161997236 GLAPNT(ph)PGKAR ddPTM_A549_MK2206_60min_R1 2 GLAPNTPGKAR 11 1 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 GLAPNT(1)PGKAR;GLAPNT(1)PGKAR 55.898999999999994 0.0064021 57983000.0 9487.7 12526.099999999999 10833.5 11254.599999999999 13435.5 10495.599999999999 9468.8 8688.6 18202.9 18775.8 18885.9 True False 11088.991808005623 13163.624986701085 12369.853202118638 14011.977505238194 11459.155747899233 11606.237425584572 11189.158393867552 9920.235657721538 14079.972214058183 14534.333739640575 14196.00980567648 0.7811344145149526 0.9272764084339684 0.8713612748543167 0.9870363360579888 0.8072096247296986 0.8175704007293408 0.788190382158894 0.6988045086975628 0.9918260417394261 1.0238323260264874 1.0 13.793197855580805 -8.882973086668843 13.039474823964955 0.9963907447845348 0.8411604902836904 0.5166803449936724 0.07308656519478658 0.31545799415727144 34.46379491535878 0.012866354762219475 0.013693359097905932 1.309263055824882e-09 8.882973086668843 -0.15523025450084438 GLAPNT(ph)PGKAR ddPTM_A549_PD325901_60min_R1 2 GLAPNTPGKAR 11 1 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 GLAPNT(1)PGKAR;GLAPNT(1)PGKAR 87.49799999999999 0.00012174 166040000.0 12185.599999999999 11328.599999999999 14834.599999999999 16500.3 13452.2 23130.0 18271.4 21194.0 19421.7 17062.5 18799.1 True False 13422.673141435405 12283.30087972515 15841.365163696568 17519.486056099784 12507.36387957064 22941.636948727057 18966.728125493733 20771.269043628632 18605.473489781052 15985.170838095532 16486.92987731347 0.8141402457170285 0.7450326392561029 0.9608438491325654 1.0626287723954686 0.758622980302789 1.3915044898865898 1.1504099469478877 1.2598627639103717 1.128498369813701 0.9695662538173118 1.0 14.0090351510873 -6.132685049322347 1.0140911978500375 1.0962032940605748 0.7543167607944925 0.38965048462837437 0.15244841310023027 0.5853894691801519 0.9434548534615702 0.023311813863307527 0.15469876920245734 7.367411890616321e-07 6.132685049322347 -0.3418865332660823 GLAPPPPT(ph)SASPSLLSNRPPPPAR ddPTM_A549_MK2206_60min_R1 1 GLAPPPPTSASPSLLSNRPPPPAR 24 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 GLAPPPPT(0.298)S(0.298)AS(0.298)PS(0.095)LLS(0.01)NRPPPPAR 41.188 0.032753 6809500.0 1656.2 2233.0 2717.6 1918.7 2368.5 1782.6 1948.7 1710.3 3241.4 3274.3 3374.6 True False 1935.7260697976253 2346.650162085846 3102.996544244943 2388.7815861337153 2020.0967875329782 1971.2335488058857 2302.753565618629 1952.7402625740801 2507.228075452167 2534.633355899889 2536.5936857780603 0.7631202745046145 0.9251186641529655 1.2232927021944973 0.9417281133856462 0.7963816983614959 0.7771183693541525 0.9078133319220558 0.7698277708103289 0.9884232108238156 0.9992271801790085 1.0 11.308676730174072 -8.953642200898338 24.997712913286907 0.9948928263182061 0.8950907676850234 0.12974646419919422 0.1234974996043933 205.40972114539753 110764.21173935452 0.022423036883930873 0.023863488982794456 1.112648019179353e-09 8.953642200898338 -0.0998020586331827 GLAPPPPT(ph)SASPSLLSNRPPPPAR ddPTM_A549_PD325901_60min_R1 2 GLAPPPPTSASPSLLSNRPPPPAR 24 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 GLAPPPPT(0.324)S(0.286)AS(0.286)PS(0.046)LLS(0.057)NRPPPPAR;GLAPPPPT(0.34)S(0.198)AS(0.34)PS(0.076)LLS(0.047)NRPPPPAR 53.208999999999996 0.0024258 16413800.0 6185.7 5957.0 5991.0 6605.5 8680.0 6918.9 6994.6 6924.7 6344.5 6617.6 6470.0 True False 6813.667710328338 6459.017296093319 6397.585286809623 7013.506732821048 8070.346744374387 6862.554772353988 7260.783330591981 6786.581426177943 6077.862728593066 6199.763606633319 5674.231016709212 1.2008090065885169 1.1383070722839985 1.1274805815925208 1.2360277035192961 1.4222802562337 1.2094246343064734 1.2796065773865681 1.1960354462469247 1.071134169669028 1.0926174116592262 1.0 12.470209173356144 -8.821895604831205 2.1456461957948956 1.0274496439381011 1.2311142337108365 0.4967577700427719 0.07702944014898724 0.16274163920949192 1.46438452462368 0.015157840489220866 0.01605476760787272 1.5069692660551203e-09 8.821895604831205 0.20366458977273538 GLAPPPPTSAS(ph)PSLLSNRPPPPAR ddPTM_A549_MK2206_60min_R1 1 GLAPPPPTSASPSLLSNRPPPPAR 24 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 GLAPPPPT(0.012)S(0.012)AS(0.965)PS(0.01)LLS(0.001)NRPPPPAR 98.491 1.3568e-08 7507000.0 2177.3 2003.5 1979.1 1992.6 2622.9 2043.4 1387.0 1660.5 2886.2 2385.3 2232.0 True False 2544.7750101258107 2105.469592359604 2259.7661395036666 2480.7870894512134 2237.07488453462 2259.6312317008565 1638.999946381198 1895.8809600679754 2232.480308314322 1846.4590733372038 1677.7327999338072 1.5167939794860132 1.254949293738951 1.3469165886205616 1.4786544612760086 1.3333916369894425 1.346836177840719 0.9769135743462026 1.130025567922839 1.3306530744361686 1.1005680245448224 1.0 10.712297251389932 -7.618968476238305 8.517781431152677 1.1456320152636192 1.3776551625402988 0.5936248331513925 0.1102672150731185 0.20657041534677173 16.40720042611191 0.021459378693978317 0.0318469928615769 2.4045373297649136e-08 7.618968476238305 0.2320231472766796 GLAPPPPTSAS(ph)PSLLSNRPPPPARDPPSR ddPTM_A549_MK2206_60min_R1 2 GLAPPPPTSASPSLLSNRPPPPARDPPSR 29 2 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 GLAPPPPT(0.083)S(0.083)AS(0.743)PS(0.046)LLS(0.046)NRPPPPARDPPSR;GLAPPPPT(0.169)S(0.134)AS(0.607)PS(0.029)LLS(0.029)NRPPPPARDPPS(0.033)R 73.317 2.9864999999999997e-06 11471600.0 1989.42 2700.2 2362.6000000000004 2135.81 3075.3999999999996 2550.6000000000004 2464.2 2048.0 4461.1 3323.3 3464.9 True False 2325.1854593507965 2837.6286465133016 2697.652206149951 2659.083545880155 2623.0127339577443 2820.502799048745 2911.913242878548 2338.310271736955 3450.6679729128346 2572.564221867909 2604.4697036248444 0.8927673284564047 1.089522616663174 1.0357779176296107 1.0209692753113235 1.0071196951560204 1.0829470564096908 1.118044582674857 0.8978066700037038 1.3249023277599543 0.9877497205237097 1.0 11.346773939763983 -8.749213194334605 24.999796786888627 1.1534261143835947 1.0263082451679422 0.06013969764409699 0.1090638700777462 293.95761192637303 601076.9506150044 0.021661929737510285 0.024472187289201665 1.7815040158279432e-09 8.749213194334605 -0.1271178692156525 GLAS(ph)SPEDRDQGLFLLR ddPTM_A549_PD325901_60min_R1 2 GLASSPEDRDQGLFLLR 17 1 Q6ZN16;Q6ZN16-2;Q6ZN16-3 Q6ZN16 MAP3K15 Mitogen-activated protein kinase kinase kinase 15 1 GLAS(0.524)S(0.476)PEDRDQGLFLLR;GLAS(0.5)S(0.5)PEDRDQGLFLLR 47.397 0.0067417 5530800.0 608.27 551.47 571.77 713.8 744.87 329.413 457.48 511.21 429.71 747.52 754.33 True False 670.0211226152928 597.9443122841333 610.5737505323218 757.88980484258 692.5529008619986 326.7303697445321 474.8896517426616 501.0135155135129 411.65078305677775 700.3214596274386 661.552192091849 1.012801606017909 0.9038505494077715 0.9229411644781469 1.1456236014366583 1.0468605638991604 0.49388449414913177 0.7178415511572043 0.7573302930631858 0.6222498964973949 1.058603490395822 1.0 9.36971116986413 GLCAIAQAESLR ddPTM_A549_PD325901_60min_R1 2 GLCAIAQAESLR 12 0 P23396;P23396-2;F2Z2S8;H0YCJ7;H0YF32 P23396 RPS3 40S ribosomal protein S3 0 ; 90.62899999999999 0.00075321 2880700.0 3107.4 3377.5 3539.6 3870.3 4052.6 3896.9 3628.4 3658.6 3956.2 3561.9 3923.9 False True 3422.860960453023 3662.133778337281 3779.818541343908 4109.359640910956 3767.959356711019 3865.1649384130787 3766.480747536665 3585.6263528838226 3789.934672056094 3337.0010261223433 3441.2851756515133 0.9946461236840093 1.0641761991271055 1.0983741097912068 1.1941351649628866 1.0949279598711719 1.123174843445317 1.0944982921456328 1.0419439743772418 1.101313747221944 0.9696961616935956 1.0 11.748731736298364 -10.860310979588094 0.6063098176775084 0.9825548754839788 1.094710016727628 0.40632784514428744 0.04800556388949811 1.1759456573987217 0.5711904814682672 0.0743580232762138 0.010164896994517348 1.3793961846405232e-11 10.860310979588094 0.11215514124364923 GLCRDEEDT(ph)SFESLSK ddPTM_A549_PD325901_60min_R1 1 GLCRDEEDTSFESLSK 16 1 H7C3L4;E7EQA9;Q92844 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 GLCRDEEDT(0.498)S(0.498)FES(0.003)LSK 42.64 0.029983 4183600.0 1949.6 1946.6 2061.7 1835.8 1610.6 2031.9 1982.4 2187.0 1972.4 2101.1 2330.7 True False 2147.5219567803356 2110.646813593295 2201.619360009247 1949.1931965956987 1497.4770122683626 2015.3528800742984 2057.841316810903 2143.378569331689 1889.5068872057639 1968.4361874240305 2044.0386755246013 1.0506268704672015 1.0325865351112296 1.0770928096280774 0.9535989802616819 0.7326069854740083 0.9859661190398264 1.0067526321549467 1.0485998112445658 0.9243987943236069 0.9630131812055036 1.0 10.997206778618478 -6.2702352148141856 23.77849250045771 0.9570656652266207 1.0513505184702172 0.2522607084615004 0.07748159950494643 376.7497665657911 1018499.8553369277 0.011338961807379349 0.026751383235260145 5.367410175585751e-07 6.2702352148141856 0.09428485324359648 GLDDST(ph) ddPTM_A549_PD325901_60min_R1 1 GLDDST 6 0 Q6XUX3-3;Q6XUX3-2;Q6XUX3 Q6XUX3-3 DSTYK Dual serine/threonine and tyrosine protein kinase 1 GLDDS(0.01)T(0.99) 52.589 0.015722 1744100.0 1046.5 980.14 920.06 758.38 1349.8 1464.5 1163.9 1067.3 1105.3 995.14 1116.2 True False 1152.7399096074175 1062.7398376016288 982.500804370233 805.2234101940545 1254.9947045572053 1452.5735975534271 1208.1928514105189 1046.0118642193472 1058.8480847842884 932.3066905683452 978.9144761747796 1.1775695810648146 1.0856309345372095 1.0036635766277229 0.8225676806216589 1.282026913588244 1.4838615966019062 1.2342169625805013 1.0685426456320866 1.0816553545329706 0.9523882966890431 1.0 9.935039012639258 -9.134235218433144 1.3179187007015405 1.025188662954503 1.1460857576987191 0.1303162786247496 0.15988100038753636 0.7628356820120885 2.7318245958994916 0.038709310380934774 0.035399221480417166 7.341161554771507e-10 9.134235218433144 0.12089709474421606 GLDDTEEPS(ph)PPEDK ddPTM_A549_MK2206_60min_R1 1 GLDDTEEPSPPEDK 14 0 O94806;O94806-2 O94806 PRKD3 Serine/threonine-protein kinase D3 1 GLDDTEEPS(1)PPEDK 125.61 5.2219e-07 2855100.0 1225.1 1476.5 1299.0 1282.5 1801.4 1812.5 975.26 1316.1 1799.5 1942.0 1978.3 True False 1431.8669291806964 1551.6475433586004 1483.2177329166102 1596.7125575736134 1536.4164463001507 2004.297546959874 1152.4521180300842 1502.6612053872104 1391.916123211011 1503.3008512224233 1487.0335116976041 0.9629015875681717 1.0434516311520328 0.9974339658447657 1.0737569429425966 1.0332090260334286 1.3478496154883282 0.7750007709741791 1.0105093083421943 0.9360354775206062 1.0109394572461574 1.0 10.538221444907272 -7.805925813277803 24.999964098015024 0.959447405305514 1.0692602912646916 0.24609856846824874 0.11182036058792645 161.400657453565 90701.44875451586 0.016406975304326346 0.022669553827906364 1.563414684268099e-08 7.805925813277803 0.1098128859591776 GLDEDRGS(ph)WR ddPTM_A549_MK2206_60min_R1 2 GLDEDRGSWR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 GLDEDRGS(1)WR;GLDEDRGS(1)WR 94.12200000000001 0.00016307 8529900.0 1353.7600000000002 1163.53 1075.63 591.78 1756.6 1401.9099999999999 1512.0100000000002 1836.88 1896.86 1993.41 1993.42 True False 1582.241591745703 1222.7487071615512 1228.1705081270936 736.7661265660138 1498.2064669539486 1550.259185687457 1786.7226452255493 2097.263365209072 1467.2242386629841 1543.0972965166281 1498.3987984068335 1.0559549256366296 0.816036897828291 0.8196552943268114 0.4917022940417313 0.9998716420134016 1.034610537151901 1.192421301408727 1.39966967901935 0.9791947512391257 1.0298308422012352 1.0 10.549205932432834 -6.972562533016888 24.999363360595463 1.0426437135085034 0.7923320507042559 0.394929852711017 0.16980137455174332 207.86386161459234 189392.07083748595 0.02569191002863915 0.04855252213341558 1.0652154748130628e-07 6.972562533016888 -0.25031166280424744 GLDEDRGS(ph)WR ddPTM_A549_PD325901_60min_R1 1 GLDEDRGSWR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 GLDEDRGS(1)WR 67.51899999999999 0.0012669 5782800.0 2807.1 2014.4 1810.0 2056.9 2133.6 1760.9 1938.2 2275.2 2904.0 2619.1 3317.4 True False 3092.074725522201 2184.1605575374156 1932.8374844141915 2183.950041441164 1983.7432965204127 1746.559814224535 2011.9592616237367 2229.819351140128 2781.95497893203 2453.7295790215976 2909.3808307312424 1.0627947681723882 0.7507303734411592 0.6643466761030363 0.7506580157442816 0.681843805240794 0.6003201078992314 0.6915420767098585 0.766424019704456 0.9562017284044642 0.8433854905151342 1.0 11.506496438661937 -8.754664510427526 3.4996477115128344 0.9815498349325168 0.7323168563669727 0.30895667903488133 0.11895349308104622 0.1387442781085727 3.5210087663130833 0.01953708760260402 0.021352498640675163 1.75928212280398e-09 8.754664510427526 -0.24923297856554405 GLDEEATPGT(ph)PGDPARPPASK ddPTM_A549_MK2206_60min_R1 2 GLDEEATPGTPGDPARPPASK 21 1 Q7Z7A3 Q7Z7A3 CTU1 Cytoplasmic tRNA 2-thiolation protein 1 1 GLDEEAT(0.01)PGT(0.99)PGDPARPPASK;GLDEEAT(0.015)PGT(0.985)PGDPARPPASK 122.04 2.555e-15 11318800.0 4071.9 4134.8 3975.1 3984.5 5569.0 4264.4 4015.9 3594.8999999999996 5831.0 4972.6 6627.8 True False 4759.137171603036 4345.24365884127 4538.828953130731 4960.702678871004 4749.80747720969 4715.655977520378 4745.537047348418 4104.488083919519 4510.287810193614 3849.286206379312 4981.934342025666 0.9552789829959821 0.8722001055265782 0.9110575614862946 0.995738269174774 0.9534062777869543 0.9465512095855886 0.9525490946994037 0.823874383348582 0.9053286335282613 0.7726489235131475 1.0 12.282490292780748 -10.773276071060199 1.114223733736875 0.9984403029107967 0.9230468416575751 0.0 0.0804681038835847 0.5122012877080269 1.1645481607099522 0.028491273386856985 0.007844955257802136 1.6854812629228987e-11 10.773276071060199 -0.07539346125322155 GLDEEATPGT(ph)PGDPARPPASK ddPTM_A549_PD325901_60min_R1 2 GLDEEATPGTPGDPARPPASK 21 1 Q7Z7A3 Q7Z7A3 CTU1 Cytoplasmic tRNA 2-thiolation protein 1 1 GLDEEAT(0.023)PGT(0.977)PGDPARPPASK;GLDEEAT(0.001)PGT(0.997)PGDPARPPAS(0.002)K 99.135 1.1895999999999999e-07 19112300.0 9333.2 10596.7 9877.8 10456.599999999999 11528.3 10553.8 9924.099999999999 10697.400000000001 11157.9 11456.2 11598.7 True False 10280.699593261299 11489.72109812188 10548.166908036737 11102.480433338365 10718.591978475948 10467.853351901238 10301.767056175893 10484.031965052045 10688.972265642458 10732.853576872683 10172.13343021718 1.0106729000154102 1.1295291373184995 1.0369670217559788 1.0914603617327228 1.0537211345100397 1.0290715732066193 1.0127439958242805 1.0306620569789562 1.0508092858760547 1.0551231607904235 1.0 13.312334670977375 -7.161607410152315 3.2279377102759805 1.0243717475256866 1.0697014250341654 0.22452958282410307 0.03172925835690568 0.23619161895882618 4.703168505173062 0.004523517427062388 0.008144866652873138 6.892750998708058e-08 7.161607410152315 0.04532967750847883 GLDIESYDS(ph)LERPLR ddPTM_A549_MK2206_60min_R1 2 GLDIESYDSLERPLR 15 1 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GLDIES(0.098)Y(0.004)DS(0.898)LERPLR;GLDIES(0.042)Y(0.002)DS(0.956)LERPLR 63.918 0.001199 6785500.0 776.96 962.0600000000001 866.23 642.6899999999999 1295.35 1140.81 1051.19 940.6 1402.8 1503.1100000000001 1085.28 True False 908.0918531517708 1011.0247447094985 989.0744394028918 800.1490788514503 1104.8057309397689 1261.5297569916092 1242.1776161762455 1073.93293046669 1085.0680398112843 1163.5564070447676 815.775023795772 1.113164569474623 1.2393426069913693 1.2124353045288931 0.98084527659156 1.3543019811996049 1.5464187063753883 1.5226963071220758 1.3164572328651576 1.3301069635136678 1.4263202146478833 1.0 9.672027527258706 -10.66670141367508 0.9589682929188638 1.002072979448399 1.2945604156434896 0.0 0.19797920545093267 0.5640963352915768 0.9326816883542982 0.110697628686145 0.030218753514520292 2.1542623250380944e-11 10.66670141367508 0.29248743619509066 GLDIESYDS(ph)LERPLR ddPTM_A549_PD325901_60min_R1 2 GLDIESYDSLERPLR 15 1 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GLDIES(0.01)YDS(0.99)LERPLR;GLDIESYDS(1)LERPLR 131.48 6.705499999999999e-10 19252200.0 1474.2 1246.05 1215.31 1149.51 1452.48 1236.26 1561.15 1176.88 1457.8600000000001 1448.78 1353.12 True False 1623.8596987513195 1351.0590065128554 1297.788244852713 1220.512621973374 1350.462815583975 1226.1923084406965 1620.5604175440596 1153.4062051555002 1396.5912140447147 1357.3037835496589 1186.694818134401 1.3683886319687348 1.13850586171502 1.0936158353610759 1.0284974732527592 1.1380034655473033 1.0332836123514801 1.3656084047722878 0.9719484635222106 1.176874789291059 1.1437681894351504 1.0 10.212733249993128 -10.919637041462005 0.8399107184899854 0.9866148802629636 1.14223222607672 0.0 0.1272120699714671 1.1274872553637194 1.1981159260022292 0.12188851508771671 0.02039567171804864 1.2032696385929078e-11 10.919637041462005 0.1556173458137563 GLDIESYDS(ph)LERPLRK ddPTM_A549_MK2206_60min_R1 2 GLDIESYDSLERPLRK 16 2 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GLDIESYDS(1)LERPLRK;GLDIESYDS(1)LERPLRK 158.15 5.5012e-21 72583000.0 1163.6799999999998 1086.94 1339.62 1026.66 1722.79 1009.72 994.7 1423.7 1555.19 1609.46 1811.73 True False 1360.0807347555235 1142.2606033038921 1529.598259714972 1278.1917460885186 1469.3698731661127 1116.5679002021095 1175.4241143946488 1625.5138348983912 1202.9419481281095 1245.8818681814846 1361.8274397957337 0.9987173815204721 0.8387704417787504 1.1231953586897934 0.9385856891532749 1.0789692072782069 0.8199040991343135 0.8631226541968898 1.193626877677108 0.8833292038149444 0.9148603059197865 1.0 10.411328192473965 GLDIESYDS(ph)LERPLRK ddPTM_A549_PD325901_60min_R1 2 GLDIESYDSLERPLRK 16 2 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GLDIES(0.198)YDS(0.802)LERPLRK;GLDIES(0.004)YDS(0.996)LERPLRK 169.25 1.3281999999999998e-28 143114000.0 2240.41 1895.51 2362.09 2470.6 2491.4700000000003 2351.1099999999997 2470.42 2316.4 2357.27 2847.2 2483.3199999999997 True False 2467.8547738973307 2055.251279992923 2522.395631801059 2623.203350860296 2316.4777423048913 2331.963339668037 2564.4331849656946 2270.197584819354 2258.202139527241 2667.427306093809 2177.887383062493 1.133141590832439 0.9436903376991321 1.1581846019302096 1.204471531109019 1.0636352275697176 1.0707456031950036 1.1774865885671508 1.0423852043382777 1.0368773689077584 1.2247774273539052 1.0 11.088713639957568 -8.492894233678289 13.763166486607878 1.0185811373424178 1.1040983861738607 0.0 0.09090792770433845 3.053399272461738 1400.708223627153 0.010821629989674035 0.013020193830148092 3.214443275839389e-09 8.492894233678289 0.08551724883144285 GLDS(ph)GAET(ph)EEEKDTWEEK ddPTM_A549_PD325901_60min_R1 1 GLDSGAETEEEKDTWEEK 18 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 2 GLDS(1)GAET(0.996)EEEKDT(0.004)WEEK 57.152 0.0007109 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLDVDSLVIEHIQVNK ddPTM_A549_MK2206_60min_R1 2 GLDVDSLVIEHIQVNK 16 0 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3QLC8;A0A0A0MRF8;P18621-2 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 0 ; 172.1 5.2483e-28 5196500.0 1865.25 2346.02 1965.3899999999999 1642.1999999999998 3018.8 2016.21 2552.1000000000004 2565.7 3257.5 2600.8 2666.5 False True 2180.05859901583 2465.422397338397 2244.111855347941 2044.539073721158 2574.738518980178 2229.5640039481195 3015.783535082522 2929.3958321267114 2519.681451158581 2013.2774736659526 2004.3344583438625 1.0876720648794138 1.2300454083773629 1.1196294341026305 1.0200588355949913 1.2845852688216655 1.1123712385758011 1.50463088758869 1.4615304446480488 1.2571162665339488 1.0044618378359267 1.0 10.96890755224374 -10.612857080635607 1.0666257614344463 1.0093656455921547 1.2323003535276984 0.2725144419056197 0.1428665864316016 0.5487111572160253 1.1757293132435058 0.08273188137981964 0.02658128509643051 2.4386131949165127e-11 10.612857080635607 0.2229347079355437 GLDVDSLVIEHIQVNK ddPTM_A549_PD325901_60min_R1 2 GLDVDSLVIEHIQVNK 16 0 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3QLC8;A0A0A0MRF8;P18621-2 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 0 ; 184.21 5.0388e-34 8467100.0 4578.9 4483.0 5144.0 4607.299999999999 5789.1 5231.0 5296.5 4940.2 5274.4 6185.8 5835.0 False True 5043.746557191977 4860.798143089871 5493.102773384863 4891.882457062508 5382.4935873108025 5188.400470332521 5498.06120585601 4841.663835488075 5052.735310220075 5795.227532324771 5117.33199111256 0.9856203517676045 0.9498696100881827 1.07343099547282 0.9559439304618896 1.0518163755368535 1.0138877992171287 1.0743999442296641 0.946130492197253 0.9873768829138558 1.1324705026739588 1.0 12.321176117070985 GLDVEDVK ddPTM_A549_MK2206_60min_R1 2 GLDVEDVK 8 0 P17844-2;P17844;J3KTA4;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3 P17844-2;A0A1X7SBZ2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 0 ; 131.06 0.0029690000000000003 5183200.0 3818.6 3924.4 3669.7999999999997 3209.5 5012.700000000001 4612.4 4095.2000000000003 4049.5 5416.200000000001 5901.4 5624.799999999999 False True 4463.086324193462 4124.135197532333 4190.232822369038 3995.8276440799277 4275.338470283538 5100.481106536669 4839.244830872587 4623.529026073636 4189.439347894124 4568.2696412997 4228.0069234174225 1.0556005240847688 0.9754324607867171 0.9910657428588475 0.9450854070149374 1.0111947656953832 1.2063559021833488 1.14456880476466 1.0935481208570301 0.9908780718144792 1.080478278310682 1.0 12.045762023816884 -4.889810346758969 16.896945025659168 1.0206122481009867 3.6020993099251406 0.0 0.07907746725107376 508.1920259561752 79673.2908706151 0.011324683175914048 1127.2178375863928 1.2888122437539853e-05 4.889810346758969 2.581487061824154 GLDYKPIQS(ph)PR ddPTM_A549_MK2206_60min_R1 1 GLDYKPIQSPR 11 1 Q5VU43-13;Q5VU43-2 Q5VU43-13 1 GLDYKPIQS(1)PR 48.70399999999999 0.0083023 2258700.0 1109.7 1057.5 1205.2 1200.3 1383.2 955.55 1138.0 958.89 1598.8 1731.7 1935.6 True False 1296.990230439817 1111.3222330522983 1376.115482456581 1494.373553883515 1179.7331123139606 1056.6656667572456 1344.7598694894039 1094.8155939774654 1236.6743527589683 1340.5077672821178 1454.9371001576521 0.8914407573353373 0.7638283695782306 0.9458247248678102 1.0271052636719413 0.8108481886853588 0.7262620952086168 0.9242735437454239 0.7524831099975626 0.84998475372232 0.9213510103886037 1.0 10.506741068550182 -10.545081023080877 0.9166225220556002 0.997404448292898 0.8548274535746009 0.15640145979078401 0.08881035943347615 0.5896341196863181 0.9102403438068379 0.052937904484575464 0.016001939848902143 2.8504864239120094e-11 10.545081023080877 -0.1425769947182971 GLDYKPIQS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GLDYKPIQSPR 11 1 Q5VU43-13;Q5VU43-2 Q5VU43-13 1 GLDYKPIQS(1)PR 47.532 0.0089204 3916500.0 1607.7 1562.2 1621.3 1253.7 1918.9 1721.5 1910.8 1786.5 1815.9 1942.8 2119.6 True False 1770.9125204738127 1693.8520765413775 1731.3311676689102 1331.1382016407165 1784.1230838456222 1707.4806747615069 1983.5165396298817 1750.8668560178612 1739.584037962354 1820.1312764396773 1858.902637251444 0.9526655592313685 0.9112107555271917 0.9313726996637329 0.7160881774899868 0.9597722054360038 0.9185422843265055 1.0670362717666002 0.9418819581678987 0.9358123460056448 0.9791428770744585 1.0 10.860235493632247 -6.964429618388744 24.99988503760551 0.9702848359592879 0.8782784571998334 0.30761704190165806 0.06791527243268583 171.54186153624377 120563.87331154534 0.009598453780507395 0.01813933168333384 1.08535142705228e-07 6.964429618388744 -0.0920063787594545 GLEAGLDT(ph)PK ddPTM_A549_MK2206_60min_R1 2 GLEAGLDTPK 10 0 Q5R3F8 Q5R3F8 ELFN2 Protein phosphatase 1 regulatory subunit 29 1 GLEAGLDT(1)PK;GLEAGLDT(1)PK 126.19 8.9542e-06 9481500.0 6378.0 6348.4 6237.5 6334.0 11073.2 8069.8 7649.7 7399.1 10745.3 9899.2 10062.099999999999 True False 7454.450472871184 6671.506443791215 7122.071292584573 7885.830284344065 9444.346948579343 8923.740879700297 9039.551470679347 8447.945083793415 8311.506706718132 7662.963844707018 7563.402870167543 0.9855947912379357 0.8820773609859855 0.9416490718319763 1.0426299404793413 1.248690187565023 1.1798579333778925 1.195169902469985 1.1169502972153957 1.0989110125947867 1.0131635159793186 1.0 12.88481975182947 -6.325418848818459 4.073878229565999 1.0880039513630981 0.9298037532160908 0.4917561267796028 0.0775349730176626 0.18772114620150146 6.220668990663664 0.013077823941432974 0.032477882197165756 4.7269515528200696e-07 6.325418848818459 -0.15820019814700736 GLEAGLDT(ph)PK ddPTM_A549_PD325901_60min_R1 2 GLEAGLDTPK 10 0 Q5R3F8 Q5R3F8 ELFN2 Protein phosphatase 1 regulatory subunit 29 1 GLEAGLDT(1)PK;GLEAGLDT(1)PK 120.96 5.0138e-05 12125300.0 6481.0 6563.4 6935.8 6323.1 7769.4 6733.7 6779.6 6806.700000000001 6993.9 7572.6 8304.9 True False 7138.9463489399695 7116.520752254303 7406.505096353563 6713.66352619798 7223.704146974924 6678.862979751118 7037.60138793947 6670.93502874715 6699.9707049424005 7094.464743652003 7283.449949098664 0.9801600064298408 0.9770810264351417 1.0168951730450386 0.921769707091734 0.9917970463803168 0.9169916765306577 0.9662455892636954 0.9159031881001237 0.9198897159678472 0.9740527899872439 1.0 12.830406257818167 -6.254950871509639 24.924939822416686 0.9551263216232495 0.989948961243095 0.2523057048303371 0.03041341343375806 744.7024331295951 2860687.7796961702 0.005037088691408824 0.01298678120293744 5.559671461231781e-07 6.254950871509639 0.03482263961984544 GLEAGLDT(ph)PKVATK ddPTM_A549_MK2206_60min_R1 2 GLEAGLDTPKVATK 14 1 Q5R3F8 Q5R3F8 ELFN2 Protein phosphatase 1 regulatory subunit 29 1 GLEAGLDT(0.998)PKVAT(0.002)K;GLEAGLDT(0.997)PKVAT(0.003)K 94.544 2.1144e-05 12341400.0 3483.6 4133.2 4303.8 3416.8999999999996 4618.6 4331.6 3523.8999999999996 3226.3 5045.4 5696.700000000001 6676.1 True False 4071.5465141571085 4343.562225675425 4914.14355575559 4254.040653390472 3939.210058222426 4789.967036916627 4164.147015899569 3683.637905129364 3902.6249558481977 4409.811513470022 5018.240119013485 0.8113494806138366 0.8655548803291039 0.979256360638566 0.8477156438314785 0.7849783917866447 0.9545113273412407 0.8298022647665136 0.7340497500652708 0.7776879669551162 0.878756577781481 1.0 12.29296578893287 -10.92532883596541 1.2183628944978644 0.9988167335708111 0.8398553210164261 0.1290917161923939 0.0769724335355412 0.3830829894843766 1.0224005511289587 0.049836525350458315 0.012129750184081956 1.1876026664916953e-11 10.92532883596541 -0.158961412554385 GLEAGLDT(ph)PKVATK ddPTM_A549_PD325901_60min_R1 2 GLEAGLDTPKVATK 14 1 Q5R3F8 Q5R3F8 ELFN2 Protein phosphatase 1 regulatory subunit 29 1 GLEAGLDT(0.982)PKVAT(0.018)K;GLEAGLDT(0.998)PKVAT(0.002)K 88.992 2.9435e-05 24963000.0 5995.5 5944.5 7663.4 7450.9 7337.0 7571.200000000001 8194.4 8849.9 7941.3 8085.2 8117.7 True False 6604.158746346179 6445.463877224567 8183.484407767796 7911.125170778348 6821.674431275901 7509.542657423356 8506.242376147738 8673.381801887757 7607.554777614643 7574.699092171132 7119.274362340089 0.9276449270281258 0.9053540500307334 1.1494829376231406 1.1112263368619466 0.9581979966050406 1.0548185496471 1.194818733373236 1.2182957644909245 1.0685856999496304 1.0639706670444073 1.0 12.797514485516212 -5.742071964887722 24.951536309675102 1.0638736826266773 0.9164993479420696 0.395061708346771 0.07755576995396367 223.50609622828628 287943.9201617319 0.011904837904362467 0.04596468804019154 1.8110399688733e-06 5.742071964887722 -0.1473743346846077 GLEELVK ddPTM_A549_MK2206_60min_R1 2 GLEELVK 7 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 117.17 0.019499000000000002 4807000.0 1969.7400000000002 2131.5 1928.9099999999999 1933.9099999999999 2698.1 1931.98 1811.31 2003.16 2687.7 2716.8 2754.1 False True 2302.1839564806005 2239.984245627399 2202.4584428022927 2407.71803681652 2301.2130641514577 2136.420841255467 2140.4015810235946 2287.1140644202155 2078.9402413749563 2103.072993100455 2070.180960706854 1.1120689447817789 1.0820234018878072 1.0638965793841872 1.1630471357414163 1.1115999556704061 1.031997145083392 1.0339200396726498 1.1047894400687033 1.0042311666633779 1.0158884817404417 1.0 11.015541168185498 -8.26348967706691 0.6599963470494714 0.9981256181590443 1.1035749953625895 0.4921393275059882 0.036116669644781184 0.34764094637163406 0.313481244644479 0.009133678725711657 0.012593269847375948 5.451428532708106e-09 8.26348967706691 0.10544937720354519 GLEELVK ddPTM_A549_PD325901_60min_R1 2 GLEELVK 7 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 105.95 0.026775999999999998 8600600.0 3636.3 3262.3 3654.1 3781.5 4141.700000000001 4023.2 4143.7 4311.7 4022.0 4265.1 4485.3 False True 4005.4544990974214 3537.2254700428475 3902.0891998883403 4015.0746665903853 3850.8012800893325 3990.43639308771 4301.390771019642 4225.699761036786 3852.9693268817573 3995.80085811348 3933.636534659326 1.0182573971451878 0.899225294171514 0.9919801093738525 1.0207030139194373 0.9789418127882098 1.0144395289010357 1.093489633096507 1.074247639252912 0.9794929686393725 1.0158032708173272 1.0 11.9416479443961 -5.983355102175983 24.913214003687486 1.006036900411652 0.9554566651181384 0.1782665795218168 0.043965723906376326 318.32002931011715 476438.4913058345 0.006312731698900577 0.019621079074029 1.0390702195376336e-06 5.983355102175983 -0.05058023529351363 GLEERLS(ph)PPLPHEER ddPTM_A549_MK2206_60min_R1 2 GLEERLSPPLPHEER 15 1 Q9UPV0 Q9UPV0 CEP164 Centrosomal protein of 164 kDa 1 GLEERLS(1)PPLPHEER;GLEERLS(1)PPLPHEER 98.165 5.3989e-06 8439300.0 379.81 163.65 340.62 313.32 447.51 252.33999999999997 260.1 211.972 439.01 417.53 556.12 True False 443.91264253703423 171.97908599433444 388.92503786455444 390.0834140654693 381.6818718129125 279.04245131026437 307.35680321106673 242.0196801370244 339.57493595491303 323.2096830128213 418.0200558688122 1.0619410152807307 0.4114134802381512 0.93039803331018 0.9331691352816088 0.913070716235434 0.6675336443614003 0.7352680783993889 0.5789666709507779 0.8123412529792166 0.7731918085630193 1.0 8.707428351718088 -10.155637512597183 0.9726263586489605 0.9824232610503018 0.7770834122571689 0.0 0.18581206456275273 0.6112217702470525 1.1512033615431556 0.06861883321692995 0.031688161510887915 6.988154326829455e-11 10.155637512597183 -0.20533984879313283 GLEERLS(ph)PPLPHEER ddPTM_A549_PD325901_60min_R1 2 GLEERLSPPLPHEER 15 1 Q9UPV0 Q9UPV0 CEP164 Centrosomal protein of 164 kDa 1 GLEERLS(1)PPLPHEER;GLEERLS(1)PPLPHEER 87.49 1.6604000000000002e-05 12914900.0 403.48 601.8199999999999 570.6800000000001 659.41 733.78 504.59 430.38 634.35 748.73 632.28 670.51 True False 444.44099257372284 652.5374834874738 609.4097765776196 700.1402580712324 682.2418242035753 500.48078633628126 446.7583464129724 621.6973916120521 717.2634818787119 592.3577328944201 588.0415207130904 0.7557986586300404 1.109679266688808 1.0363380052459847 1.19063065006397 1.1601932859711208 0.8510977009401847 0.7597394583144562 1.0572338341995795 1.2197497227898466 1.0073399786057549 1.0 9.19977421492486 -8.517474395397935 24.94729665955958 1.1055981298311435 0.991262262544467 0.06672077508631624 0.14980839020280348 441.5852280641083 2038429.0252185345 0.027158477874381533 0.03124791546328323 3.0375651717135295e-09 8.517474395397935 -0.11433586728667644 GLEGERPARLT(ph)R ddPTM_A549_MK2206_60min_R1 4 GLEGERPARLTR 12 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 1 GLEGERPARLT(1)R;GLEGERPARLT(1)R;GLEGERPARLT(1)R;GLEGERPARLT(1)R 89.541 0.00051397 20305300.0 3052.15 3713.67 3219.32 3102.41 4693.36 3487.9900000000002 3683.0800000000004 3832.32 6224.61 5756.08 6694.65 True False 3567.2783020968577 3902.679940632936 3675.8679845520414 3862.5005892724794 4002.9729612563947 3857.0867866596236 4352.2479614402755 4375.56309598778 4814.745773659625 4455.777530228823 5032.183642059529 0.7088927105682639 0.7755440218862284 0.7304717486517669 0.7675595455200177 0.7954743399662759 0.7664837098594097 0.8648825780251185 0.8695157822572999 0.9567905537901011 0.8854560658293464 1.0 12.296968856850322 -8.252528708777662 0.6892154370716714 0.9925096774652924 0.7421462381345311 0.8016447860847334 0.03971861001743233 0.08374415071522355 0.08157773369334329 0.005260348256421019 0.007267809251833545 5.590765689259188e-09 8.252528708777662 -0.25036343933076133 GLEGERPARLT(ph)R ddPTM_A549_PD325901_60min_R1 2 GLEGERPARLTR 12 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 1 GLEGERPARLT(1)R;GLEGERPARLT(1)R 74.789 0.002424 15680000.0 2843.85 3027.28 3017.55 3099.8 4376.1 3152.55 3083.82 3887.7 4034.7000000000003 3985.0 4082.39 True False 3132.555558468282 3282.399509840084 3222.3390890022333 3291.267605843418 4068.737832725433 3126.8766780246206 3201.176457631056 3810.1567736583515 3865.135590047196 3733.3864199156446 3580.281910402401 0.8749466206464738 0.9167991772667877 0.9000238443905281 0.9192761040075473 1.1364294585026498 0.8733604660961403 0.8941129603035265 1.064205799713161 1.0795618017724138 1.0427632553370736 1.0 11.805857474030656 -6.315854274424686 0.4422884443922875 1.0357379472169803 0.8424704947236472 0.3021539825378108 0.07518969634708343 2.1148931739202865 0.4875305724449528 0.019507062415387418 0.18279145067667268 4.832209174621239e-07 6.315854274424686 -0.1932674524933331 GLEGKS(ph)PDTGPDWLK ddPTM_A549_PD325901_60min_R1 2 GLEGKSPDTGPDWLK 15 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 GLEGKS(0.726)PDT(0.274)GPDWLK;GLEGKS(0.847)PDT(0.153)GPDWLK 101.49 1.9671e-06 20510100.0 13867.1 15208.7 12718.0 14037.7 16375.7 15547.5 13805.8 13891.099999999999 17028.7 15675.0 17860.4 True False 15274.877783580525 16490.390523937287 13581.119959546799 14904.776847070176 15225.527325098104 15420.886314757188 14331.187273823642 13614.031113142857 16313.042957899399 14685.277824887758 15663.684026403911 0.9751778545731653 1.0527785478907654 0.8670450665790639 0.9515498922185571 0.9720272254874897 0.9844993226856821 0.9149308202122751 0.8691461785231366 1.0414563349465475 0.9375366484751049 1.0 13.935135947322163 -8.805245713536259 24.999883417204654 1.0195766204462549 0.9501429462705596 0.05886854533571184 0.056504439084234546 128.99871778458595 73617.8347689957 0.008945797732462157 0.009523555728551382 1.5658648901578172e-09 8.805245713536259 -0.06943367417569524 GLEGNANS(ph)PAHLR ddPTM_A549_MK2206_60min_R1 4 GLEGNANSPAHLR 13 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 GLEGNANS(1)PAHLR;GLEGNANS(1)PAHLR;GLEGNANS(1)PAHLR;GLEGNANS(1)PAHLR 145.52 5.5482e-13 54866000.0 5774.32 6490.9 5655.719999999999 6223.55 8380.1 6396.7699999999995 5908.17 5954.99 8687.5 8707.400000000001 9811.4 True False 6748.884047430154 6821.259085124506 6457.786140424272 7748.320029385772 7147.398391051344 7073.671955567727 6981.608012408797 6799.128068892019 6719.795121086776 6740.392292448062 7374.958599135556 0.9151080588060811 0.9249216783296992 0.8756369345830919 1.0506255628735297 0.9691442053504022 0.9591473444199207 0.9466640278125947 0.9219208457236584 0.9111637754650481 0.9139566279379692 1.0 12.848419235177898 -7.283531281129841 0.00593160930594803 1.8839944239722066 1.5257632413074165e-05 0.0 0.04694435908266457 11972.261202275644 24.232835015454675 3778.2524149733495 3918.114433696534 5.2055751301405587e-08 7.283531281129841 -1.8839791663397936 GLEPADLAGSAPAEEEGRGS(ph)PASGSPDVEGAR ddPTM_A549_PD325901_60min_R1 1 GLEPADLAGSAPAEEEGRGSPASGSPDVEGAR 32 1 E7EUN2 E7EUN2 AGAP1 1 GLEPADLAGS(0.003)APAEEEGRGS(0.984)PAS(0.01)GS(0.003)PDVEGAR 75.965 4.7364999999999995e-06 3048800.0 1598.4 1686.9 1464.4 1357.9 1655.2 2051.4 1409.5 1748.5 1712.6 1514.7 1931.7 True False 1760.6683913201114 1829.0609831760655 1563.7829901525658 1441.7743989853464 1538.944462130009 2034.6940785395034 1463.1392938079944 1713.624795828285 1640.6253777269267 1419.0615834996815 1694.1131460552062 1.03928618665163 1.0796569210475047 0.9230688008022851 0.8510496493947655 0.9084071307241124 1.2010378901063072 0.8636609055392542 1.0115173238685458 0.9684272750891358 0.8376427435227743 1.0 10.726314516948232 -5.747201754245486 24.960671168731945 0.9757264810140703 1.0594715855494394 0.11336477988577431 0.09907685670144209 371.9944866669752 652150.173662956 0.011550313194902129 0.04430292893680582 1.7897742099602786e-06 5.747201754245486 0.0837451045353691 GLEPS(ph)PAAVAALPPEVR ddPTM_A549_MK2206_60min_R1 2 GLEPSPAAVAALPPEVR 17 0 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 GLEPS(1)PAAVAALPPEVR;GLEPS(1)PAAVAALPPEVR 71.692 0.00095747 2226250.0 894.88 1322.01 752.77 723.8399999999999 1581.47 1456.73 1010.07 983.19 1741.56 1362.2 1690.68 True False 1045.9138662845664 1389.2946622387417 859.5241053176577 901.1808324944127 1348.8378579606403 1610.880201700886 1193.5866444421458 1122.5601933930939 1347.0994406998443 1054.478073911013 1270.837495605776 0.8230114943106914 1.0932118914043374 0.6763446217865522 0.709123578435843 1.0613771332877486 1.2675737120370534 0.9392126440786147 0.8833231607303166 1.0600092028742953 0.8297505208629135 1.0 10.311563846655275 -6.77959403269064 24.99678709718058 1.0312449216602906 0.8339022178588147 0.24768670967053585 0.146866647184902 211.99963029339077 291897.83036870207 0.019332360750903412 0.036585276756303034 1.6611389718873313e-07 6.77959403269064 -0.1973427038014759 GLEPS(ph)PAAVAALPPEVR ddPTM_A549_PD325901_60min_R1 1 GLEPSPAAVAALPPEVR 17 0 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 GLEPS(1)PAAVAALPPEVR 151.48 7.2442e-17 2876200.0 1465.5 1291.4 1540.7 1634.2 1313.3 1318.9 1786.1 1855.2 1494.5 1885.3 1900.1 True False 1614.2764811559198 1400.2308101686938 1645.261166981737 1735.1408224625177 1221.058338639042 1308.1593156799008 1854.071012891423 1818.1965806237542 1431.6913622637458 1766.261836252689 1666.399745726302 0.9687210318508155 0.8402730579860967 0.987314821189347 1.0412512525356004 0.7327523553520722 0.7850213125841172 1.1126207968084658 1.0910926896663031 0.8591524128202154 1.0599268517548062 1.0 10.702518809014403 -7.731030745743641 24.999427595296428 0.9583405475723589 0.893981598510563 0.1544636423528093 0.11283795126831234 493.7660537982029 405932.02695996035 0.018246795572426 0.027062615070535118 1.857672937054843e-08 7.731030745743641 -0.06435894906179584 GLFIIDDK ddPTM_A549_MK2206_60min_R1 2 GLFIIDDK 8 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 ; 143.85 0.0026101999999999996 31313000.0 2005.14 2093.9 1977.78 1871.5900000000001 2681.96 2485.13 2218.11 1911.44 3220.2000000000003 3024.2200000000003 3000.84 False True 2343.5586110336976 2200.470566229984 2258.258943654975 2330.1296340188683 2287.4472367709286 2748.1048071042164 2621.1118753191067 2182.3924735394944 2490.8298416027224 2341.046601587991 2255.6486090292865 1.0389732698845513 0.975537837507834 1.0011572434710085 1.0330197818452027 1.0140973321883353 1.2183213272243043 1.1620213648645816 0.9675232502099174 1.104263240130583 1.0378596170595276 1.0 11.139326623012346 -7.046804280809244 24.999453671734862 1.0656459796836395 1.0106168757277778 0.18248222555915417 0.06837384862038372 731.9570322248117 390956.96853914595 0.011134059519504065 0.019285275766505308 8.97833320988112e-08 7.046804280809244 -0.05502910395586169 GLFIIDDK ddPTM_A549_PD325901_60min_R1 2 GLFIIDDK 8 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 ; 143.85 0.0026101999999999996 54334000.0 10125.7 10198.900000000001 10710.5 9944.8 12098.8 11304.900000000001 12830.3 11993.400000000001 11241.599999999999 11210.4 11149.0 False True 11153.653609853645 11058.397096042663 11437.37893746862 10559.067709720497 11249.022026594099 11212.836642527656 13318.56408750956 11754.18222835972 10769.154645717043 10502.573430821161 9777.743679334002 1.1407185518094254 1.1309763743771908 1.169736016054745 1.0799084181392362 1.1504721738993582 1.146771383077553 1.3621306227999561 1.2021364656145639 1.101394656977812 1.0741305740115832 1.0 13.255285870678962 -9.46297143522543 1.2546551641919028 1.0245802684778849 1.1699828938055006 0.33608334699542375 0.07092050456465561 0.27953208198465157 0.909569287163482 0.018684128343935142 0.014641475597171417 3.4437258037562275e-10 9.46297143522543 0.14540262532761572 GLFIIDDKGILR ddPTM_A549_PD325901_60min_R1 1 GLFIIDDKGILR 12 1 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 100.56 6.328e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLFPS(ph)ELDEELEDRPHEEPGAAAGSSSK ddPTM_A549_PD325901_60min_R1 1 GLFPSELDEELEDRPHEEPGAAAGSSSK 28 1 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 GLFPS(1)ELDEELEDRPHEEPGAAAGSSSK 84.962 5.3247e-07 1581300.0 603.27 308.89 320.85 487.06 332.22 441.16 404.71 494.07 588.05 695.74 766.88 True False 664.5135262960983 334.92124434954917 342.6248104277863 517.1445900064822 308.88601329678096 437.567339226132 420.1114605158098 484.21538625958283 563.3363034989599 651.8108576642684 672.5586216528536 0.988038075644642 0.4979807463124328 0.5094348647048269 0.7689212112626971 0.459270022496589 0.6506010407699239 0.6246466062443158 0.7199601204570006 0.8376017872085659 0.9691509954365073 1.0 9.393516211320513 -9.018664063702614 0.861683731455855 0.9629699293006372 0.624711321227149 0.4630056284919757 0.14027086708146339 0.28919082900218146 0.44943886926632054 0.034461365616173065 0.031095163164909904 9.579347683174015e-10 9.018664063702614 -0.3382586080734882 GLFQDEDSCS(ph)DCSYR ddPTM_A549_PD325901_60min_R1 2 GLFQDEDSCSDCSYR 15 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 GLFQDEDS(0.329)CS(0.669)DCS(0.002)YR;GLFQDEDS(0.242)CS(0.757)DCS(0.002)YR 139.34 3.2191999999999996e-10 15318100.0 6166.0 6859.4 6344.4 6240.6 6256.3 6307.9 6091.1 6276.1 5330.0 7013.6 8343.9 True False 6791.967780830708 7437.465711066392 6774.96913597646 6626.067688569077 5816.879071063299 6256.5305537775785 6322.9001436778135 6150.918261994794 5105.998635574283 6570.760099051537 7317.653196340034 0.9281620211556008 1.0163730791158951 0.9258390571672622 0.9054908056975347 0.794910460360795 0.8549914003722967 0.864061192028101 0.8405588645648322 0.6977645016202841 0.8979327009290273 1.0 12.837165328683408 -6.310657904025588 2.336330329665231 0.8498898743926635 0.969356318012897 0.29675831231166383 0.0719975376751547 0.4174039160383917 4.408796835298429 0.0155426619936412 0.04551614055585663 4.890374249331965e-07 6.310657904025588 0.11946644362023351 GLFS(ph)DEEDSEDLFSSQSASK ddPTM_A549_MK2206_60min_R1 1 GLFSDEEDSEDLFSSQSASK 20 0 F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 GLFS(1)DEEDSEDLFSSQSASK 84.32700000000001 1.4365000000000002e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLFS(ph)DEEDSEDLFSSQSASK ddPTM_A549_PD325901_60min_R1 1 GLFSDEEDSEDLFSSQSASK 20 0 F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 GLFS(1)DEEDSEDLFSSQSASK 75.112 0.00011382 1168500.0 829.81 938.01 725.36 757.54 1341.1 818.49 809.4 677.17 793.22 774.05 869.72 True False 914.0517003261651 1017.0593946463808 774.5872915440209 804.3315253018326 1246.9057625438343 811.8244888094945 840.2021599206745 663.6633131204118 759.8837218968544 725.1763508998004 762.7499536093254 1.1983634951413387 1.3334112835191476 1.0155192902715777 1.054515338212403 1.634750361692568 1.0643389553390974 1.101543377282222 0.8700928921463231 0.99624223941423 0.9507392920422648 1.0 9.575066376833526 -7.505964971873263 24.88473622454208 0.9974618102358388 1.240610722895876 0.3842510741302998 0.1596266125508769 582.2744023618638 856683.8156809736 0.02293592517065168 0.03612826699440503 3.1191411490344256e-08 7.505964971873263 0.24314891266003724 GLGAEERRS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 GLGAEERRSPVR 12 2 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 GLGAEERRS(1)PVR;GLGAEERRS(1)PVR 57.328 0.004751300000000001 27025000.0 3228.8 3747.1 3114.0 3412.0 3429.4 2991.4 2481.3 3060.1000000000004 4247.5 5297.0 5027.0 True False 3773.7425034190114 3937.8113848418634 3555.6120248670727 4247.9401531705025 2924.9398028987102 3307.9479624693854 2932.120091532566 3493.878546163213 3285.4480318637243 4100.404021073729 3778.657161858087 0.9986993637611042 1.0421192545834232 0.9409723805476611 1.1241930588594744 0.7740685851109137 0.875429503332544 0.7759688074190749 0.9246349685889896 0.869475025420979 1.0851484655616201 1.0 11.883657913256112 -6.751121695204633 24.99968251115098 0.9091709438354963 1.0215030924808972 0.292207930877861 0.09348912111553391 221.33551579089976 536290.9378505475 0.012457574513105182 0.02570735077049398 1.7736923985802338e-07 6.751121695204633 0.11233214864540086 GLGAEERRS(ph)PVR ddPTM_A549_PD325901_60min_R1 4 GLGAEERRSPVR 12 2 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 GLGAEERRS(1)PVR;GLGAEERRS(1)PVR;GLGAEERRS(1)PVR;GLGAEERRS(1)PVR 110.84 1.5564000000000002e-05 178677000.0 10623.4 10874.9 10740.8 10395.8 12307.6 11374.099999999999 10755.0 11624.1 10938.600000000002 12286.3 14271.600000000002 True False 11701.879747466264 11791.365988464875 11469.735277677326 11037.924955425176 11443.156634914998 11281.47310067083 11164.287410361821 11392.248206569955 10478.888682006163 11510.54092120692 12516.283675126304 0.9349324488962718 0.9420820344538801 0.9163850528948309 0.8818851699055783 0.9142615277772955 0.9013436730497391 0.8919810145042243 0.9101941520556815 0.837220452491895 0.9196452573284111 1.0 13.611518641551893 -11.054714285390551 1.3754785923477282 0.9997304732501853 0.8963571371501287 0.14218591148333848 0.0355924703631358 0.24964509316479477 0.846046126602755 0.023592352736289242 0.005307935942854207 8.816286900841511e-12 11.054714285390551 -0.10337333610005661 GLGAGAGAGEES(ph)PATSLPR ddPTM_A549_MK2206_60min_R1 2 GLGAGAGAGEESPATSLPR 19 0 O15173;O15173-2 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 1 GLGAGAGAGEES(0.998)PAT(0.001)SLPR;GLGAGAGAGEES(1)PATSLPR 246.69 7.452199999999999e-86 36123000.0 5060.4 5663.299999999999 5609.3 5318.6 7690.4 5478.6 5535.2 5662.6 8561.3 7856.9 8490.9 True False 5914.471805098355 5951.5377800899105 6404.783086411963 6621.65723876103 6559.1523474112755 6058.341815599644 6540.874191210679 6465.290890985198 6622.17921958679 6082.020833145964 6382.375193081527 0.9266882040262412 0.9324957558968575 1.0035109019217057 1.0374910653856395 1.027697706415219 0.9492299703983035 1.0248338578247427 1.0129913543775289 1.0375728501146737 0.9529400339451768 1.0 12.639877705765636 -5.7816986521118565 4.258660719453488 1.0152857698335562 0.9274047708771812 0.46779355356757857 0.02975018386376863 0.08688438226471208 3.563087108548837 0.003365578776035295 0.012528455664189222 1.6531084578613376e-06 5.7816986521118565 -0.08788099895637502 GLGGSDGEPASGS(ph)PK ddPTM_A549_MK2206_60min_R1 3 GLGGSDGEPASGSPK 15 0 Q9H6A9;Q9H6A9-3 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 GLGGSDGEPAS(0.012)GS(0.988)PK;GLGGSDGEPAS(0.003)GS(0.997)PK;GLGGSDGEPASGS(1)PK 164.81 4.4069e-20 8673100.0 4992.6 4697.6 4609.9 3435.17 5893.299999999999 5490.5 4637.2 3967.0999999999995 6462.6 6017.1 6567.0 True False 5835.228822649213 4936.68777492811 5263.653138546789 4276.786804210641 5026.403376807303 6071.501065701068 5479.719215110954 4529.4485737342175 4998.831418651558 4657.83293094256 4936.232660020302 1.1821219185858256 1.0000921988364717 1.0663300336668369 0.8664070554958507 1.0182671123906526 1.2299868105641716 1.1101014868064214 0.9175921974706087 1.0126814846346806 0.9436007683891064 1.0 12.269194679462847 GLGGSDGEPASGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GLGGSDGEPASGSPK 15 0 Q9H6A9;Q9H6A9-3 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 GLGGSDGEPASGS(1)PK;GLGGSDGEPASGS(1)PK 206.2 2.8336999999999995e-39 13309800.0 7253.8 6725.9 6662.7 6866.9 8399.5 8743.1 7580.4 8069.7 7941.9 8195.7 9092.3 True False 7990.200436034676 7292.715197548102 7114.8708880698505 7291.052817138576 7809.548096701919 8671.899092365571 7868.87627015404 7908.743502942815 7608.129561701198 7678.222103313091 7974.004740838514 1.0020310616462536 0.9145611815602243 0.8922581713089976 0.9143527065889201 0.979375903390885 1.0875211859296774 0.9868161013065287 0.9918157513048034 0.9541165084510795 0.9629066388673453 1.0 12.961088747732743 -6.819405335649663 6.537336766374874 0.988189590732231 0.9269600786060839 0.345971281694887 0.041579802846341225 0.1937838320203323 16.64481300152045 0.006276204685250048 0.012013938767980993 1.5156351348115855e-07 6.819405335649663 -0.061229512126147134 GLGHPPS(ph)SPLLK ddPTM_A549_MK2206_60min_R1 1 GLGHPPSSPLLK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 GLGHPPS(0.608)S(0.392)PLLK 78.486 0.0003024 18890000.0 1260.5 1243.8 1428.6 1034.3 1731.9 983.72 1108.8 1245.9 2213.0 1532.9 1818.9 True False 1473.2415837337912 1307.1041073006618 1631.1969616972062 1287.7035464314915 1477.1398042340568 1087.8165974595124 1310.2546074603254 1422.510140408727 1711.759033434824 1186.6168253547132 1367.2169309138012 1.0775477910071862 0.9560327097668677 1.1930783804783414 0.941842890704136 1.0803989994819527 0.7956430123582897 0.9583370259938164 1.0404421626478615 1.2520025130838182 0.8679067663107558 1.0 10.417026452495431 -8.534405453926068 24.85341295225458 1.1204338844605377 0.9990863325963854 0.0 0.13285862324589032 282.7146731757106 609575.3725632936 0.021294888829096536 0.024155752331814623 2.921423686031858e-09 8.534405453926068 -0.12134755186415236 GLGHPPSS(ph)PLLK ddPTM_A549_MK2206_60min_R1 1 GLGHPPSSPLLK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 GLGHPPS(0.1)S(0.9)PLLK 86.291 9.9615e-05 15967000.0 2162.9 2385.4 2690.6 1932.9 2680.9 2062.1 1958.5 2355.1 2963.6 3311.3 3210.2 True False 2527.9446421720095 2506.806671132815 3072.167538248986 2406.46058677118 2286.5431613667565 2280.3100532888016 2314.3340987653764 2688.9426371912614 2292.349331896722 2563.275030202272 2413.0187429872353 1.0476274374240873 1.038867467738553 1.2731635621055089 0.9972821776726289 0.9475861586288773 0.9450030423161384 0.9591032417345874 1.1143480111813975 0.9499923440540173 1.0622690095763716 1.0 11.23662340631178 -6.488647507741223 24.989807355776797 0.9807649179232367 1.1156907497591364 0.3270774284799347 0.0762682986991781 442.73988485485955 323212.89188925136 0.00969115113496568 0.022508080416890845 3.24602972326474e-07 6.488647507741223 0.13492583183589968 GLGHPPSS(ph)PLLK ddPTM_A549_PD325901_60min_R1 2 GLGHPPSSPLLK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 GLGHPPS(0.167)S(0.833)PLLK;GLGHPPS(0.151)S(0.849)PLLK 85.45700000000001 0.00012127 43557000.0 6668.299999999999 7108.5 6673.6 6900.299999999999 8170.3 7797.0 7959.1 7352.0 8738.7 8244.1 9629.8 True False 7345.260907056998 7707.558242282916 7126.510627616878 7326.515859281668 7596.446314004842 7733.503817087108 8261.98790588664 7205.358592467578 8371.442828647841 7723.566119053094 8445.395648331745 0.8697355592224905 0.9126343587947147 0.8438338385040146 0.867516000950045 0.8994778492710878 0.9157065150185995 0.9782831083252643 0.8531700458451444 0.9912434156120902 0.9145298149031966 1.0 13.043949296382126 -8.352220854269618 0.5691921637666206 1.0034500040922862 0.8735889454276864 0.24545410532601575 0.045701663671881346 0.3270669602172877 0.22971896481484888 0.010698976449135238 0.014059333758774016 4.444052140574937e-09 8.352220854269618 -0.12986105866459985 GLGHPPSS(ph)PLLKK ddPTM_A549_MK2206_60min_R1 1 GLGHPPSSPLLKK 13 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 GLGHPPS(0.157)S(0.843)PLLKK 63.894 0.0013809 4768700.0 1135.9 1360.2 1604.7 1611.0 2267.1 1248.0 1315.5 1122.3 1980.8 1794.0 1646.7 True False 1327.6121499113153 1429.4283701160641 1832.2705896930597 2005.6950723205377 1933.612593209209 1380.0625316446467 1554.5093218921897 1281.3894618996014 1532.1519626876188 1388.7341540128878 1237.778943392025 1.0725761308179231 1.1548333228216345 1.4802890285658619 1.6203984427333251 1.5621631015230497 1.1149507260664058 1.2558860612317357 1.035232881234888 1.2378235797814514 1.1219565185098264 1.0 10.273537969369096 -7.289848995853464 23.7000713849791 1.12062814315932 1.3847944874419447 0.3620946803256304 0.16524293124539527 340.5047189632425 284057.4838101827 0.02771221770083876 0.04430801561704228 5.130397368464864e-08 7.289848995853464 0.26416634428262475 GLGHPPSS(ph)PLLKK ddPTM_A549_PD325901_60min_R1 1 GLGHPPSSPLLKK 13 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 GLGHPPS(0.152)S(0.848)PLLKK 71.344 0.00050607 5723000.0 1860.1 1947.3 1776.6 1399.5 1944.4 1659.0 1570.8 1631.7 2266.2 1753.7 2008.7 True False 2048.9359826667546 2111.405805049945 1897.1707595636763 1485.9439365048916 1807.8320518158475 1645.4896540396976 1630.5776535747425 1599.154463456114 2170.959494922785 1642.9710827116858 1761.642634198424 1.163082649619827 1.1985437704910387 1.0769328141441807 0.8434990773148608 1.0262195162178511 0.9340655261720673 0.9256006989843781 0.9077632616354991 1.232349542851866 0.9326358540699512 1.0 10.782705574323204 -13.426340480069335 11.407730449151563 0.7062281590159982 1.063561409174284 0.0 0.13068760403879717 0.0 0.0 0.0 0.019001876794298538 3.746791444917464e-14 13.426340480069335 0.35733325015828576 GLGKPGGQGDAIQLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GLGKPGGQGDAIQLSPK 17 1 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 GLGKPGGQGDAIQLS(1)PK;GLGKPGGQGDAIQLS(1)PK 112.32 9.5414e-10 27106000.0 14437.7 13823.2 15119.5 14474.3 15976.6 14600.9 14572.6 15109.7 16036.2 14754.3 15816.3 True False 15903.404675527008 14988.129576524614 16145.600190939434 15368.344637479628 14854.45873227785 14481.99511131296 15127.1682674327 14808.325180169655 15362.254281387672 13822.710980015401 13870.995367786396 1.1465222396700256 1.0805374220895942 1.1639828118200888 1.1079482207290352 1.0709007059994715 1.0440487309905337 1.0905611217031768 1.0675748053784293 1.1075091494201297 0.9965190394423223 1.0 13.75978369717814 -14.999999999999988 0.20225751582346885 0.5391314538582079 1.1155456399678776 0.6286029186465507 0.030760867853735205 25.707432973033477 0.30419079428210394 4.714134131424223 0.02714850733747922 1.0000000000000287e-15 14.999999999999988 0.5764141861096697 GLGLGANLTEAQALT(ph)PTGPSR ddPTM_A549_MK2206_60min_R1 2 GLGLGANLTEAQALTPTGPSR 21 0 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 GLGLGANLTEAQALT(0.972)PT(0.022)GPS(0.006)R;GLGLGANLTEAQALT(0.995)PT(0.004)GPS(0.001)R 171.68 4.584899999999999e-35 6167600.0 2190.95 2433.8999999999996 2134.41 1438.52 2539.8 2726.0 2623.8 2145.92 3956.5 3473.8 3530.5 True False 2560.728796415352 2557.775113972568 2437.1014328826354 1790.9574645776158 2166.1987844527166 3014.463510627651 3100.510496982688 2450.1107316043795 3060.3590672322107 2689.0661673411214 2653.7794131569485 0.9649365669654875 0.9638235571847422 0.9183511714650948 0.6748705094697696 0.816269345414733 1.1359133678113928 1.1683376853445049 0.9232533493391284 1.1532077805937884 1.0132967924949707 1.0 11.373832740987938 -7.25918302353305 24.9662873780183 1.0735800902288195 0.86509992355272 0.4875492271544175 0.10089252549561065 136.77840830562621 1513431.910870756 0.016051437333936446 0.02695104353299266 5.50575619932854e-08 7.25918302353305 -0.20848016667609948 GLGLGANLTEAQALT(ph)PTGPSR ddPTM_A549_PD325901_60min_R1 2 GLGLGANLTEAQALTPTGPSR 21 0 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 GLGLGANLTEAQALT(0.976)PT(0.014)GPS(0.01)R;GLGLGANLTEAQALT(0.998)PT(0.002)GPSR 238.79 5.6551e-86 14156000.0 5301.700000000001 4683.1 4800.2 5591.1 6019.1 5818.9 5035.0 5739.5 5675.6 5103.2 6013.9 True False 5839.924681094744 5077.76127234088 5125.970437947518 5936.449548690603 5596.339180767727 5771.512807650147 5226.60968025772 5625.021169949353 5437.0742694306555 4780.9830810824415 5274.228425253099 1.1072566848134755 0.9627495934814786 0.9718901087795668 1.1255579148348558 1.0610725834270576 1.0942857120135414 0.9909714291540012 1.066510722784901 1.030875766282296 0.9064800944515429 1.0 12.364744339907686 -9.809860514023493 0.7320053977550012 1.002525872777692 1.0454415485466169 0.19079650929101255 0.05886169128771641 1.1188460761027255 1.252200964941437 0.022202347539255665 0.011074854920603136 1.549314145140955e-10 9.809860514023493 0.042915675768924855 GLGLPLS(ph)PVRPR ddPTM_A549_PD325901_60min_R1 1 GLGLPLSPVRPR 12 1 O43593-2;O43593 O43593-2 HR Lysine-specific demethylase hairless 1 GLGLPLS(1)PVRPR 71.548 0.00067855 1543200.0 456.36 411.51 344.0 228.44 456.41 375.56 410.07 493.79 368.42 464.83 462.96 True False 502.6893312455244 446.1893918944709 367.3459086400453 242.55021997511778 424.3533361290223 372.50156387652095 425.6754382489139 483.9409710792387 352.9365886150617 435.48055447161613 406.01885494523896 1.2380935641851503 1.0989376144973608 0.904750861113557 0.5973865918316313 1.0451567235375219 0.917448929623629 1.0484129814767496 1.1919174816265845 0.8692615732406401 1.0725623925281764 1.0 8.665402915471809 -5.543645134832809 3.552729721897124 0.9430611851184938 1.2205136060466149 0.24811644997234417 0.1450983193963779 0.21242496505887026 5.445392273953206 0.01943324139038061 0.10874139846652348 2.85992645552372e-06 5.543645134832809 0.27745242092812106 GLGPPS(ph)PPAPPR ddPTM_A549_MK2206_60min_R1 2 GLGPPSPPAPPR 12 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR 134.21 4.5515e-08 283250000.0 29464.0 32924.0 27562.0 25841.0 38229.0 28925.0 28480.0 29164.0 41747.0 41654.0 42981.0 True False 34436.80287436132 34599.69097022588 31470.70604668792 32172.046160046575 32605.564741650065 31985.824301138942 33654.44734890881 33298.086311004176 32291.371156260127 32244.3324700406 32307.63148474685 1.0659030480343228 1.0709448319218684 0.9740951162435395 0.9958033034775611 1.0092217610270773 0.9900392827075597 1.0416872361812666 1.030656992813755 0.999496703170754 0.9980407410943717 1.0 14.979587368145268 -5.746541593795776 24.999320234598144 1.0030476722777513 1.0684239923586571 0.6626975987508384 0.01761466037220666 102.85045683741942 172585.8422992609 0.0024301258021151993 0.009331643126826243 1.7924968708860975e-06 5.746541593795776 0.06537632008090588 GLGPPS(ph)PPAPPR ddPTM_A549_PD325901_60min_R1 3 GLGPPSPPAPPR 12 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR 138.24 1.665e-08 502901000.0 45008.3 44039.2 41987.6 45607.1 51758.3 47677.5 42876.4 44866.3 51038.4 49759.9 52570.8 True False 49577.50948264076 47750.537939585854 44837.13102794991 48424.1469857608 48122.97556444156 47289.23024742472 44508.08486486637 43971.40644956857 48893.43353881701 46618.051421922355 46104.92487375836 1.0753191685788626 1.0356927827197075 0.972501986517062 1.050303131788042 1.0437708270040327 1.0256871771705334 0.9653650881491649 0.9537247174779774 1.0604817960921522 1.0111295387546777 1.0 15.492633245420027 -7.525401623365599 24.99890291613453 1.0171895401801347 1.033035983222712 0.10409891485551315 0.03667134535914893 267.80797607586067 2653651.1009066957 0.006450818608286718 0.009596603610719805 2.9826230968994256e-08 7.525401623365599 0.01584644304257732 GLGPPS(ph)PPAPPRGPAGEAGAS(ph)PPVRR ddPTM_A549_PD325901_60min_R1 2 GLGPPSPPAPPRGPAGEAGASPPVRR 26 2 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 2 GLGPPS(1)PPAPPRGPAGEAGAS(1)PPVRR;GLGPPS(1)PPAPPRGPAGEAGAS(1)PPVRR 72.842 9.2149e-06 26698000.0 4062.6 3996.6000000000004 4171.5 3728.4 4478.8 5041.4 4181.4 4496.7 4025.8 4009.6 4275.9 True False 4475.032161271952 4333.407508068918 4454.603075267293 3958.6948001892365 4164.224539021195 5000.344509870841 4340.525465149877 4407.009790907094 3856.6096260966133 3756.4331717173836 3749.9914071633557 1.1933446441300104 1.1555779834031359 1.1878968753789583 1.0556543656679342 1.1104624216115688 1.3334282580805439 1.157476109640802 1.1752053038011447 1.0284315901976715 1.0017178078172986 1.0 11.872671574442068 -8.792143909348388 4.942563182726723 1.0124925441459687 1.1706077225651181 0.5578029226730998 0.06393851003870621 0.10441734030337145 6.139523015229034 0.011335980199505734 0.012208505937028668 1.613823705911939e-09 8.792143909348388 0.15811517841914946 GLGPS(ph)PAGDGPSGSGK ddPTM_A549_MK2206_60min_R1 1 GLGPSPAGDGPSGSGK 16 0 Q92934;F5GYS3;A8MXU7 Q92934 BAD Bcl2-associated agonist of cell death 1 GLGPS(0.94)PAGDGPS(0.039)GS(0.021)GK 50.04 0.021716 11821000.0 2951.6 3719.1 3343.2 3368.7 3917.3 3346.3 3791.7 4395.2 4227.2 4632.4 4814.9 True False 3449.757920308337 3908.386304439531 3817.3160313216395 4194.031651226688 3341.07035921593 3700.4032449058345 4480.602809440221 5018.233059735482 3269.7459494512836 3585.937622658474 3619.2274455202923 0.9531752210207963 1.0798951884820462 1.0547322843847606 1.1588195863230042 0.9231446239587258 1.022429040619157 1.2379997877685465 1.38654813362084 0.9034375425889356 0.9908019533552601 1.0 11.821466059466596 GLGS(ph)SPDLELLLR ddPTM_A549_MK2206_60min_R1 1 GLGSSPDLELLLR 13 0 Q9NQQ7-2;Q9NQQ7;Q9NQQ7-3 Q9NQQ7-2 SLC35C2 Solute carrier family 35 member C2 1 GLGS(0.647)S(0.353)PDLELLLR 101.53 0.00014183 6004300.0 1499.1 1502.4 1321.6 1506.7 1742.0 1673.3 1328.3 1142.3 2693.8 1929.3 1935.9 True False 1752.111430523861 1578.8657427307555 1509.0227527502634 1875.8415676383324 1485.7541076134462 1850.3674953533537 1569.6349162063052 1304.224523147034 2083.6586011146555 1493.4697900429576 1455.1626018780723 1.2040657368891547 1.0850098406137076 1.0370131494601893 1.2890941295614116 1.0210227404799241 1.2715881324638354 1.0786663388548412 0.8962740806173595 1.431907745859761 1.0263250224514051 1.0 10.506964655538756 -8.757596156788498 24.999944423568117 1.2039564245798906 1.1143532625952008 0.0 0.15159867369034874 258.28003219713645 1680094.5965234207 0.030619114769699127 0.0340819493763435 1.7474463189132056e-09 8.757596156788498 -0.08960316198468976 GLGS(ph)SPDLELLLR ddPTM_A549_PD325901_60min_R1 2 GLGSSPDLELLLR 13 0 Q9NQQ7-2;Q9NQQ7;Q9NQQ7-3 Q9NQQ7-2 SLC35C2 Solute carrier family 35 member C2 1 GLGS(0.5)S(0.5)PDLELLLR;GLGS(0.5)S(0.5)PDLELLLR 210.93 2.2323000000000003e-37 40615000.0 10523.7 11889.8 10276.7 12525.6 12982.0 11636.3 12169.2 13353.1 13978.8 14280.1 13676.0 True False 11592.058276861526 12891.795173256729 10974.13866081731 13299.27786429843 12070.189105468693 11541.53783080297 12632.30556524175 13086.761945195694 13391.319648586452 13378.452048942892 11993.938699306835 0.9664930401496437 1.074859184831567 0.9149737159696788 1.1088332363302003 1.0063574116954812 0.9622808753783267 1.053224122778934 1.0911146265865121 1.1165072612352418 1.1154344193635135 1.0 13.55001788390967 -7.965427188877965 23.719717268833858 1.0598765157609156 1.0092466505924171 0.24001972697048568 0.058780501219316134 167.06091372232765 114616.3012545705 0.00965901973425568 0.013345809538975932 1.082861245716995e-08 7.965427188877965 -0.050629865168498434 GLGTDDNTLIR ddPTM_A549_PD325901_60min_R1 2 GLGTDDNTLIR 11 0 Q6P452;P09525;P09525-2 Q6P452 ANXA4 Annexin;Annexin A4 0 ; 135.55 1.2842e-07 13190400.0 5895.0 5946.5 5544.1 5822.0 6703.700000000001 5666.799999999999 5610.8 6510.0 7470.4 6112.5 7348.0 False True 6493.456060330371 6447.6324242435685 5920.3559653816155 6181.611717278651 6232.855238509509 5620.651459621548 5824.322064347571 6380.152943003798 7156.445067015784 5726.555706834224 6444.242582809787 1.007636813308652 1.0005260263545672 0.9187047025781346 0.9592456580961568 0.9671974880548165 0.8721973742290222 0.9038024235593066 0.9900547443733807 1.1105176403672046 0.888631306665889 1.0 12.653795087587625 -8.539661315795936 9.129108642066946 1.0521418044520765 0.9463950035775597 0.0 0.06621442358206665 0.14763442118388798 70.58226988713639 0.009180712027270103 0.010479817938506704 2.8862814899968827e-09 8.539661315795936 -0.10574680087451682 GLGTDEDS(ph)LIEIICSR ddPTM_A549_PD325901_60min_R1 2 GLGTDEDSLIEIICSR 16 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR 406.29 0.0 45123000.0 15634.0 18524.0 21008.0 17330.0 16102.0 15920.0 19449.0 21326.0 10780.0 15568.0 16631.0 True False 17221.15217085749 20085.082489983655 22433.72921136648 18400.43474071437 14971.05106888437 15790.35279825918 20189.142337901176 20900.636200076642 10326.954088459805 14585.033823148506 14585.49243259519 1.1807041997685461 1.3770589222684149 1.5380851428253668 1.2615573197647867 1.0264343928099091 1.0826067663626773 1.384193398419866 1.4329743268296222 0.7080291691339443 0.9999685571502777 1.0 13.832246474600776 -8.761015467169248 24.99999508776597 0.8621248786049366 1.28402598727923 0.5245522691530662 0.16104202127185166 6.426915370183372 379022.5296216397 0.031265999450638536 0.03440102806025585 1.7337422503374394e-09 8.761015467169248 0.4219011086742933 GLGTDEDT(ph)LIEILASR ddPTM_A549_PD325901_60min_R1 1 GLGTDEDTLIEILASR 16 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 GLGTDEDT(1)LIEILASR 241.8 2.0854e-65 14172000.0 3170.8 3410.2 3643.5 3916.1 3603.5 4170.7 4307.6 4025.3 4060.9 3280.8 3799.1 True False 3492.6972817804117 3697.589522097939 3890.769820145362 4157.988602891609 3350.4025914001268 4136.735201991179 4471.528075209165 3945.012233713238 3890.2344951601526 3073.6497280951685 3331.8347844791315 1.0482804543762598 1.1097757725931139 1.1677559278359022 1.2479576185052736 1.0055728474315386 1.241578730512557 1.3420617660993064 1.1840359708382013 1.167595258108909 0.9225096461605238 1.0 11.702101148294059 -10.45786675607006 0.8751203479909755 1.0038625578500733 1.1707188328434275 0.4047269478559372 0.09293757842860546 0.5352954748217962 0.7612909243020318 0.053642149970060005 0.01711332884504081 3.484442032316294e-11 10.45786675607006 0.1668562749933542 GLHVVEVTYDDVPIPNS(ph)PFK ddPTM_A549_MK2206_60min_R1 2 GLHVVEVTYDDVPIPNSPFK 20 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 GLHVVEVTYDDVPIPNS(1)PFK;GLHVVEVTYDDVPIPNS(1)PFK 94.463 7.0387e-07 9617900.0 1273.78 1691.88 1733.5500000000002 1156.28 2399.8999999999996 2300.98 1804.95 2324.0 2792.6 1975.27 2144.4 True False 1488.7629230689643 1777.98946539624 1979.3934571959899 1439.568651907382 2046.8778891283066 2544.4681763330923 2132.8860513487707 2653.4341169515064 2160.0805588658354 1529.055135115405 1611.886297570815 0.9236153476287978 1.103048935942783 1.227998190802307 0.8930956569808159 1.2698649353946636 1.5785655478104876 1.3232236383938034 1.6461670534394086 1.3400948702902764 0.948612279550834 1.0 10.65453426443603 -5.310100434099608 0.8362434016707104 1.2387610666399784 0.7955228892418463 0.17232416052973354 0.2238165618091564 3.7619603016858196 1.985064066963128 0.038296494145314976 1.50956069171946 4.896655671643103e-06 5.310100434099608 -0.4432381773981321 GLHVVEVTYDDVPIPNS(ph)PFK ddPTM_A549_PD325901_60min_R1 2 GLHVVEVTYDDVPIPNSPFK 20 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 GLHVVEVTYDDVPIPNS(1)PFK;GLHVVEVTYDDVPIPNS(1)PFK 133.38 1.9994e-17 19048800.0 3033.8999999999996 3563.7 3294.0 3909.9 3420.7 4018.0 3634.9 3904.6000000000004 3618.2 3669.4 3690.9 True False 3341.8992945608657 3864.0255058062367 3517.550648431132 4151.40564297283 3180.44183277436 3985.2787401636524 3773.228108593602 3826.719689900557 3466.1396366294307 3437.7134577762777 3236.942698542817 1.0324246073510344 1.193726879238769 1.0866891928654272 1.2825082275449853 0.9825449904337533 1.231186063923132 1.1656765225693386 1.1822018633889446 1.0708066096411875 1.062024811042791 1.0 11.66041611135844 -9.178150027698994 1.5381354789656096 1.0217178354972054 1.1465782627838195 0.21167087051234357 0.08377663200703125 0.28737051159736504 1.4034871490901752 0.016279803199549532 0.014877657341207516 6.635138189338407e-10 9.178150027698994 0.12486042728661406 GLIVYCVT(ph)SPK ddPTM_A549_PD325901_60min_R1 1 GLIVYCVTSPK 11 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 GLIVYCVT(0.5)S(0.5)PK 131.09 9.286e-08 4417000.0 4662.5 4709.1 6354.0 5085.5 5956.9 5965.0 6057.4 6215.3 5603.3 4388.9 5948.5 True False 5135.833567648911 5105.952383587891 6785.220649705954 5399.619784991513 5538.507894189376 5916.42301768945 6287.917671736464 6091.330965691474 5367.812787000634 4111.784104985639 5216.872210648341 0.9844660479062495 0.978738251085766 1.3006300280571186 1.0350301036644447 1.0616529733821223 1.1340939127497183 1.2053041396915904 1.16762127185294 1.0289331557794732 0.7881703708580271 1.0 12.348969379073958 -8.900559927124698 6.7690846061936885 1.01264226630696 1.1104809154225777 0.24843001615568738 0.11316231312824594 0.26597428181767596 15.677495221063875 0.015817143119737066 0.01676663987638472 1.2573033504976284e-09 8.900559927124698 0.09783864911561757 GLIVYCVTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GLIVYCVTSPK 11 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 GLIVYCVT(0.077)S(0.923)PK 121.83 9.5712e-06 3002600.0 2783.8 2783.7 2671.5 3560.1 4309.9 3362.6 3352.0 3713.6 5005.5 4014.0 3940.9 True False 3253.6373826244567 2925.3784398559646 3050.3588710444365 4432.3246598189635 3675.9194192900077 3718.428100086768 3961.015011009212 4240.014172423027 3871.762242140991 3107.2346121559267 2962.265766693163 1.0983610651034048 0.9875475970954569 1.0297384202800999 1.496261648652429 1.2409147959041873 1.2552648522950471 1.3371572043081645 1.4313415832220349 1.3070273051371475 1.0489385007559924 1.0 11.532485365899927 GLIVYCVTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 GLIVYCVTSPK 11 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 GLIVYCVT(0.158)S(0.842)PK 134.68 5.4432e-08 3966200.0 5056.1 5896.4 5756.6 6127.4 5783.4 5662.8 5643.3 5598.9 5679.6 5893.6 6579.7 True False 5569.391549895904 6393.310321417596 6147.277493247919 6505.875581664925 5377.193935646866 5616.684034295353 5858.058869632249 5487.225547247922 5440.906163341033 5521.47709019193 5770.438612154809 0.9651591368054032 1.1079418309642486 1.0653050671571724 1.1274490587181705 0.9318518568623856 0.9733547849316708 1.0151843323127774 0.9509200107752072 0.9428929980955605 0.9568557021924697 1.0 12.494465267229726 -6.768029851131462 24.999860000860743 0.9716435773076235 1.0693437292108312 0.5363433200844308 0.0442079180642798 90.2488594321048 342345.1613343306 0.006238196514512359 0.011987430697062039 1.705965125852055e-07 6.768029851131462 0.09770015190320769 GLKEGMNPSYDEYADS(ph)DEDQHDAYLER ddPTM_A549_MK2206_60min_R1 5 GLKEGMNPSYDEYADSDEDQHDAYLER 27 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER 255.9 5.831799999999998e-125 179414900.0 10399.189999999999 14796.970000000001 13756.130000000001 11803.880000000001 20290.3 13566.749999999998 11623.840000000002 9793.76 26077.0 21334.699999999997 24341.100000000002 True False 12154.319036214678 15550.072570031078 15706.956083376583 14695.831129896316 17305.623748397884 15002.374480120186 13735.741266577965 11182.055472132091 20170.60113641207 16515.176452407333 18296.53308981578 0.6642962891685757 0.849891752371741 0.8584662463797249 0.8032030471431941 0.9458416883376962 0.8199572239437433 0.7507291790827605 0.6111570655074676 1.1024274947279185 0.9026396624615192 1.0 14.159282685546641 -8.781951929183506 24.99436681618323 1.0483685649303245 0.797957195022628 0.4558514080217927 0.10010395738765404 115.92592617763142 141254.15605144858 0.016312047623773307 0.01737515390502568 1.6521446592848775e-09 8.781951929183506 -0.2504113699076965 GLKEGMNPSYDEYADS(ph)DEDQHDAYLER ddPTM_A549_PD325901_60min_R1 6 GLKEGMNPSYDEYADSDEDQHDAYLER 27 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEY(0.001)ADS(0.999)DEDQHDAYLER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER 283.27 4.7103999999999984e-154 403485000.0 17264.809999999998 16875.99 23212.28 23819.65 20482.52 36414.6 29389.899999999998 28774.0 25819.9 28213.800000000003 27808.300000000003 True False 19017.520801518618 18298.188903592047 24787.604907578923 25290.93568214986 19043.89845605797 36118.051570822165 30508.348727270375 28200.07999723366 24734.779394120895 26432.375853002774 24388.055391337683 0.7797883224536792 0.750293068060331 1.0163830001953806 1.0370214138160794 0.7808699033389154 1.480973000563662 1.2509545446623243 1.156307034108589 1.014216959787059 1.083824660427465 1.0 14.573887107379342 -5.802354713589625 4.7746997162525355 1.053312439409168 0.7621315780912109 0.340785992719146 0.16877230873566487 0.1729931683860574 8.78836918413166 0.02396661894980939 0.0835047653469745 1.5763232687852073e-06 5.802354713589625 -0.29118086131795706 GLLAQGLRPES(ph)PPPAGPLLNGAPAGES(ph)PQPK ddPTM_A549_MK2206_60min_R1 3 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK 162.96 4.5003e-47 28159100.0 4999.9 5585.4 4754.5 4931.5 6509.3 6464.2 5273.7 5610.6 8664.1 7893.3 7764.9 True False 5843.760884181345 5869.673002827718 5428.759592880698 6139.71772138345 5551.790592817571 7148.23735341132 6231.863026121505 6405.9197317418775 6701.695183724654 6110.198047865066 5836.661029662199 1.0012164239936265 1.0056559688831936 0.9301139067853134 1.051922955638695 0.9511929105704611 1.2247134649560125 1.0677102875172757 1.097531567995242 1.1482070227594696 1.0468653253654336 1.0 12.510927569256134 GLLAQGLRPES(ph)PPPAGPLLNGAPAGES(ph)PQPK ddPTM_A549_PD325901_60min_R1 4 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK 181.1 2.6876999999999996e-67 77145700.0 13052.099999999999 13443.249999999998 13477.03 12913.6 15195.13 16292.99 15431.01 16237.9 16390.81 14860.7 17372.0 True False 14377.139583551816 14576.159856589977 14391.662299764974 13711.2437430865 14127.876489152706 16160.305291363626 16018.245529722666 15914.022346113868 15701.961256277167 13922.392865857079 15235.354130181224 0.9436695373605208 0.9567325926290493 0.9446227620830357 0.899962260537452 0.9273087037186353 1.0607108409347752 1.0513864917646079 1.0445456147677068 1.0306266019226684 0.9138214147760984 1.0 13.895135413930168 -7.24896161758267 24.795022677613154 1.023273745443614 0.9343447268239764 0.5158088122990622 0.03947999219787786 271.5297991042452 539566.7629314488 0.0038535106281769728 0.006644525157551873 5.6368747163675084e-08 7.24896161758267 -0.08892901861963765 GLLAQGLRPES(ph)PPPAGPLLNGAPAGESPQPK ddPTM_A549_MK2206_60min_R1 4 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(0.999)PPPAGPLLNGAPAGES(0.001)PQPK 243.15 1.5210999999999998e-121 1067789000.0 14608.78 16269.0 16151.300000000001 14978.0 21503.7 16900.1 17825.3 16443.0 25876.6 23222.8 23024.7 True False 17074.384913620423 17097.022609482592 18441.79720527794 18647.61067238797 18340.53421577915 18688.457364621547 21063.92627557949 18773.845604575563 20015.591416439045 17976.75335106495 17307.031540607495 0.9865576816890168 0.9878656873865308 1.0655667415875416 1.0774586403586932 1.059715767706712 1.0798187615694126 1.217073316481639 1.0847524926805894 1.156500545427242 1.038696515279705 1.0 14.079070677974823 -5.8221727737515305 2.910828145782351 1.0858207464261276 0.9831176179830341 0.33584978944782407 0.0544880886297058 0.2838610522065359 4.75305121471222 0.009478283301131391 0.03965579920818434 1.5060078175315082e-06 5.8221727737515305 -0.10270312844309348 GLLAQGLRPES(ph)PPPAGPLLNGAPAGESPQPK ddPTM_A549_PD325901_60min_R1 4 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(0.992)PPPAGPLLNGAPAGES(0.008)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(0.99)PPPAGPLLNGAPAGES(0.01)PQPK 274.96 8.440999999999999e-156 1598939000.0 21842.399999999998 23174.9 22997.600000000002 23777.3 29090.7 26242.8 26417.600000000002 29338.1 28527.899999999998 28359.399999999998 28930.600000000002 True False 24059.82436847498 25127.930155318634 24558.35543180323 25245.969818833688 27047.469589466822 26029.087337572608 27422.936224265413 28752.928580205793 27328.97157144459 26568.78264415452 25372.319606183544 0.9482705855010318 0.9903678711817366 0.9679192053775824 0.9950201720098519 1.0660227369544495 1.0258852064605477 1.080821014787395 1.1332400437364172 1.0771175830838968 1.0471562339014278 1.0 14.63096780006919 -6.610949682429246 4.197943068732448 1.0489042809673377 0.9721871553676764 0.5804978177400433 0.03454847229459751 0.17399465339696604 5.727714857748976 0.006295769409907071 0.013607838257309152 2.449347007946227e-07 6.610949682429246 -0.07671712559966126 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK ddPTM_A549_MK2206_60min_R1 2 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 0 ; 117.04 9.1138e-21 5442100.0 1869.78 2326.67 2554.8999999999996 2327.1000000000004 3634.1000000000004 2156.07 2477.5 1899.47 4345.7 3657.5 4311.1 False True 2185.3531522679637 2445.0875649889276 2917.223237743379 2897.239604467489 3099.528704063162 2384.2238963165637 2927.6296807205626 2168.725689382908 3361.4058886568996 2831.2682097559295 3240.534889692937 0.6743803806028581 0.75453209060206 0.9002289242501584 0.8940621542704704 0.9564867559123437 0.73575010838488 0.903440259209175 0.6692492947015947 1.0372997060912421 0.8737039736128906 1.0 11.662016251789305 -8.789339866043136 24.999784390192595 1.0176137967659271 0.8202963168889176 0.29572034503152966 0.10192640064726971 126.48362412603072 113333.03292022532 0.015681830637056093 0.01669530600126095 1.624277146899727e-09 8.789339866043136 -0.19731747987700954 GLLASDLNTDGDMRVT(ph)PEPGAGPTQGLLR ddPTM_A549_MK2206_60min_R1 5 GLLASDLNTDGDMRVTPEPGAGPTQGLLR 29 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GLLAS(0.022)DLNT(0.091)DGDMRVT(0.829)PEPGAGPT(0.058)QGLLR;GLLAS(0.002)DLNT(0.019)DGDMRVT(0.964)PEPGAGPT(0.014)QGLLR;GLLAS(0.001)DLNT(0.021)DGDMRVT(0.964)PEPGAGPT(0.015)QGLLR;GLLAS(0.005)DLNT(0.024)DGDMRVT(0.95)PEPGAGPT(0.021)QGLLR;GLLASDLNT(0.001)DGDMRVT(0.953)PEPGAGPT(0.046)QGLLR 67.571 0.00013113 19888200.0 3264.68 3535.35 4041.8199999999997 3664.49 5899.08 3797.6400000000003 3727.11 3616.9700000000003 6762.3 6313.24 6019.52 True False 3815.6781702372327 3715.284214299237 4615.010852391851 4562.290214505207 5031.33314646402 4199.503744130589 4404.277642506722 4129.686574006064 5230.649847174112 4887.074699264394 4524.7070536996225 0.8432983892553546 0.8211104432189568 1.0199579326618264 1.0083062086361712 1.111968816268482 0.9281272122792721 0.9733840423780736 0.9126970044678206 1.1560195577517614 1.0800864323953265 1.0 12.143608674458838 -4.0621864674326105 0.47779098400935316 1.055229911391392 0.11959647454478811 0.38096180307318894 0.07935576040654284 8.751581997366218 0.566056082011127 0.01771853808720228 5.987588706332061 8.665897193945628e-05 4.0621864674326105 -0.9356334368466039 GLLASDLNTDGDMRVT(ph)PEPGAGPTQGLLR ddPTM_A549_PD325901_60min_R1 4 GLLASDLNTDGDMRVTPEPGAGPTQGLLR 29 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GLLAS(0.01)DLNT(0.037)DGDMRVT(0.948)PEPGAGPT(0.005)QGLLR;GLLAS(0.001)DLNT(0.01)DGDMRVT(0.983)PEPGAGPT(0.006)QGLLR;GLLASDLNT(0.005)DGDMRVT(0.991)PEPGAGPT(0.004)QGLLR;GLLASDLNTDGDMRVT(1)PEPGAGPTQGLLR 86.936 1.0544e-09 77985000.0 4946.4 5518.200000000001 5026.5 5623.33 5719.07 5843.0 6374.4 5710.5 6636.7 5772.0 6321.5 True False 5448.554886652778 5983.238080124587 5367.628516799962 5970.670322590962 5317.382252920414 5795.416545240475 6616.981280205519 5596.599597699412 6357.782578745935 5407.554934944317 5543.9955752901515 0.98278485483236 1.0792285092708516 0.9681877346229738 1.076961595929571 0.9591245484791215 1.0453501389991937 1.1935401445300058 1.0094884676033506 1.1467870946872452 0.9753894752452623 1.0 12.436710390710536 -7.523905773691707 24.999730179873282 1.0760789595551727 1.0163857070642381 0.10204617392377902 0.06974433995102877 54.21440170624046 1319666.5490888916 0.010707076353909961 0.015958701344913152 2.992913921023772e-08 7.523905773691707 -0.0596932524909346 GLLDDLRNDLDR ddPTM_A549_PD325901_60min_R1 2 GLLDDLRNDLDR 12 1 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 0 ; 73.848 0.0013904000000000002 1975210.0 444.07 403.61 429.59000000000003 445.15 258.68 413.86 318.7 457.96999999999997 541.78 349.24 403.14 False True 489.1516594929442 437.6236311694183 458.7445607345264 472.64590449099853 240.51120919755368 410.4896613748458 330.82830289933173 448.835429079485 519.0108706907006 327.18892679832857 353.5563357150157 1.383518297030958 1.2377762380764266 1.2975147505327065 1.3368333607574638 0.6802627612687385 1.161030421204844 0.9357159509821261 1.2694877272437541 1.467972196399981 0.9254223266474269 1.0 8.465796302351489 -11.26781007974786 1.7935262492703166 0.9996231744210503 1.2316856001299477 0.1289685418167057 0.2131437654461171 0.6492662750860316 3.7708386654937085 0.17264155330043798 0.034780590850329786 5.397466061739932e-12 11.26781007974786 0.23206242570889735 GLLEFEHQR ddPTM_A549_MK2206_60min_R1 2 GLLEFEHQR 9 0 Q14697;Q14697-2;F5H6X6;E9PKU7;E9PNH1 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 124.23 9.670200000000001e-05 4149300.0 0.0 336.31 355.96 357.86 373.66 390.24 279.81 389.57 406.59000000000003 371.73 392.33000000000004 False True 0.0 353.4267425038472 406.4404805304055 445.5357160649458 318.6951089844088 431.534937779653 330.64785508069434 444.79274050808874 314.4980141908113 287.75593482230255 294.90363324284533 0.0 1.198448247712193 1.3782145579593879 1.510784086196927 1.0806754243070713 1.4633083120556043 1.121206447831094 1.5082647019876276 1.0664433351752929 0.9757625962693486 1.0 8.204099786433941 -8.978781246480871 24.75721589167393 1.0293130033993023 1.1909390477826198 0.02055340682063811 0.3990207737068622 400.8174565009719 467664.5970926326 0.06741409603340055 0.06902172983979661 1.0500712148593286e-09 8.978781246480871 0.1616260443833175 GLLEFEHQR ddPTM_A549_PD325901_60min_R1 2 GLLEFEHQR 9 0 Q14697;Q14697-2;F5H6X6;E9PKU7;E9PNH1 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 169.12 2.1938000000000002e-07 7215000.0 473.575 349.85 163.93 382.38 469.02 440.22 398.806 541.57 302.5 557.42 670.2 False True 521.6519853725113 379.33308729868173 175.05527559117039 405.9987441520116 436.0776532311607 436.6349942744759 413.98278056501664 530.7679614965538 289.78697697208634 522.2244060701075 587.7696487478386 0.8875109262341433 0.6453771270884743 0.2978297296638254 0.6907446565451881 0.741919311689815 0.7428675420799049 0.7043282711976526 0.9030203628705242 0.4930281405129325 0.8884848123455064 1.0 9.199107052793384 -11.00803059482384 1.2557982127920901 1.0022358728116956 0.6581276578897033 0.26768525318617886 0.16425288044479022 0.414425398377522 1.1509737609851651 0.12317927924375743 0.02720801293771146 9.816787840767834e-12 11.00803059482384 -0.3441082149219923 GLLGLEPVPS(ph)SPCR ddPTM_A549_PD325901_60min_R1 1 GLLGLEPVPSSPCR 14 0 E7EX78;O14901-2;O14901 E7EX78 KLF11 Krueppel-like factor 11 1 GLLGLEPVPS(0.5)S(0.5)PCR 45.997 0.039101 883840.0 1011.8 1185.5 1136.3 1038.0 1210.9 1279.3 1451.2 1433.9 1437.8 1228.8 1329.8 True False 1114.5171911522077 1285.4062455126125 1213.416151126987 1102.1149025309594 1125.850561378219 1268.8818049505628 1506.4262101271113 1405.299739627212 1377.3742660841847 1151.2133582916804 1166.2430302967405 0.9556474612916902 1.1021770009511243 1.04044879120799 0.945013066659473 0.9653653073422922 1.0880080497696152 1.2916915008219292 1.2049801826208089 1.1810353676743721 0.9871127444155136 1.0 10.187652743928725 -7.41512915716223 6.212007507647122 1.1156796847136194 1.0070641085984193 0.3127547932963347 0.09127208070178375 0.3101432336714272 15.481576111197036 0.015781081355169254 0.025287199542665235 3.844774232409934e-08 7.41512915716223 -0.10861557611520012 GLLS(ph)GMFLFATR ddPTM_A549_PD325901_60min_R1 1 GLLSGMFLFATR 12 0 Q8TF72-2 Q8TF72-2 SHROOM3 Protein Shroom3 1 GLLS(0.874)GMFLFAT(0.126)R 52.693000000000005 0.008622399999999999 35860000.0 3414.1 4386.4 3170.8 3278.6 5125.0 4071.3 3611.5 4588.7 4713.1 4186.8 4147.1 True False 3760.696918672418 4756.057322072139 3385.9895555693483 3481.1116757591553 4765.037680290176 4038.144682635214 3748.937608788628 4497.174778734491 4515.024797246748 3922.444733476242 3637.0329906328857 1.0340013215052013 1.307675056652299 0.9309757608165515 0.9571295296811156 1.310144200660936 1.110285414797002 1.0307681064328948 1.236495459435448 1.2414033111261609 1.0784737844222005 1.0 11.828546296847312 GLLS(ph)PPMGQSGLR ddPTM_A549_MK2206_60min_R1 7 GLLSPPMGQSGLR 13 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GLLS(0.998)PPMGQS(0.002)GLR;GLLS(0.885)PPMGQS(0.115)GLR;GLLS(0.977)PPMGQS(0.023)GLR;GLLS(0.95)PPMGQS(0.05)GLR;GLLS(0.993)PPMGQS(0.007)GLR;GLLS(1)PPMGQSGLR;GLLS(1)PPMGQSGLR 158.11 1.9084e-18 79609300.0 19036.4 20012.6 19284.0 19498.3 27382.600000000002 21771.699999999997 18558.1 19911.8 30560.3 28767.800000000003 29916.499999999996 True False 22249.278924704435 21031.155859274168 22018.761171334816 24275.384375311947 23354.655813510875 24075.566843115197 21929.86655006265 22734.358627330046 23638.440844771038 22269.133999895184 22487.407396603823 0.9894105857692003 0.9352414659615413 0.9791596151124213 1.07951014304024 1.0385659583433362 1.0706243907312867 0.9752065306280983 1.0109817564279784 1.0511856893000946 0.9902935277126876 1.0 14.45682972000406 -6.018240177603054 23.411808377971695 1.0275871964104817 0.961044640583403 0.3967865200509646 0.032845909036441905 218.74248659930052 280765.02651197684 0.004504999727286993 0.012202690411226094 9.588702014757975e-07 6.018240177603054 -0.06654255582707869 GLLS(ph)PPMGQSGLR ddPTM_A549_PD325901_60min_R1 4 GLLSPPMGQSGLR 13 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GLLS(0.986)PPMGQS(0.014)GLR;GLLS(1)PPMGQSGLR;GLLS(1)PPMGQSGLR;GLLS(0.996)PPMGQS(0.004)GLR 175.31 6.186e-22 130693000.0 22686.1 22328.7 22245.3 21769.6 25536.699999999997 24405.8 24315.1 25944.0 27001.799999999996 25455.699999999997 29612.1 True False 24989.17617137588 24210.41791157947 23754.99982985582 23114.258749651213 23743.090288832416 24207.04725651721 25240.424436233265 25426.52656732572 25867.00824728888 23848.42275770305 25969.999426568003 0.9622324498710341 0.9322456082463969 0.9147092935841123 0.8900369372363062 0.9142507051633817 0.9321158179061318 0.9719070078381148 0.9790730507800359 0.9960342248150471 0.91830663397341 1.0 14.664558361710263 -7.939391924339422 1.5963962619716847 0.9975549291673469 0.9205973023010411 0.31363638785301917 0.029252053098698733 0.11670840967188748 0.6002504863051387 0.00298850932339096 0.0043596052332290115 1.1497623300922768e-08 7.939391924339422 -0.0769576268663058 GLLS(ph)QGSPLSWEETKR ddPTM_A549_PD325901_60min_R1 2 GLLSQGSPLSWEETKR 16 1 P48506;E1CEI4;A0A0C4DGB2;D6RGF8 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLS(0.992)QGS(0.008)PLSWEETKR;GLLS(0.941)QGS(0.059)PLSWEETKR 108.45 2.661e-07 10651200.0 3324.5 3508.4 3053.0 3890.1 3833.9 3983.2 3413.1000000000004 3324.3999999999996 4773.7 4331.8 4666.7 True False 3662.0007926324497 3804.0651807308705 3260.1949391804005 4130.382641941892 3564.620090236978 3950.762139825749 3542.987388219986 3258.0922340586494 4573.077989988924 4058.289408730389 4092.7254846486694 0.8947584699653526 0.9294699082553839 0.7965828520405307 1.0092009975832656 0.8709648628053476 0.9653132502154351 0.8656792158451169 0.7960690855713067 1.1173673893208818 0.9915860284186061 1.0 11.998846187402584 -8.769329423489514 24.99996110718782 1.0554234915085339 0.8940442313010915 0.4681334522848012 0.06810086849313063 98.5588758229808 312287.4006598175 0.011979377138426006 0.0128655240910257 1.7008678671175524e-09 8.769329423489514 -0.16137926020744242 GLLSAEVAR ddPTM_A549_PD325901_60min_R1 1 GLLSAEVAR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 69.998 0.0036658999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLLSDS(ph)MTDVPVDTGVAAR ddPTM_A549_MK2206_60min_R1 7 GLLSDSMTDVPVDTGVAAR 19 0 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;A0A087WYR3 O43399-2 TPD52L2 Tumor protein D54 1 GLLS(0.01)DS(0.868)MT(0.122)DVPVDTGVAAR;GLLS(0.02)DS(0.823)MT(0.156)DVPVDT(0.001)GVAAR;GLLS(0.153)DS(0.833)MT(0.013)DVPVDTGVAAR;GLLS(0.062)DS(0.593)MT(0.345)DVPVDT(0.001)GVAAR;GLLS(0.03)DS(0.788)MT(0.182)DVPVDTGVAAR;GLLSDS(0.919)MT(0.081)DVPVDTGVAAR;GLLS(0.034)DS(0.89)MT(0.075)DVPVDTGVAAR 283.49 1.3932999999999997e-126 38148400.0 12187.5 13393.16 13002.880000000001 10955.72 16358.2 12084.800000000001 12418.39 12048.15 17599.999999999996 18292.4 16751.3 True False 14244.452044232909 14074.814637188398 14846.883906841209 13639.871891820963 13951.93044957651 13363.605514758989 14674.650716756174 13756.01215841191 13613.628101424723 14160.134135376451 12591.48989763942 1.131276136504178 1.1178037509148988 1.1791205034143433 1.0832611551694202 1.1080444461296146 1.0613204333558908 1.1654419640607656 1.0924848663850977 1.0811769069502195 1.1245797161804587 1.0 13.620161380697093 -10.686526340564976 0.2524328064007718 0.9348270105536021 1.1380937061186418 0.0 0.049071953157140996 2.158576275466933 0.1867499188980485 0.1352525956750231 0.02340964810851282 2.0581340580603933e-11 10.686526340564976 0.20326669556503973 GLLSDS(ph)MTDVPVDTGVAAR ddPTM_A549_PD325901_60min_R1 1 GLLSDSMTDVPVDTGVAAR 19 0 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;A0A087WYR3 O43399-2 TPD52L2 Tumor protein D54 1 GLLS(0.006)DS(0.992)MT(0.001)DVPVDTGVAAR 132.51 1.3427e-16 14264000.0 1080.4 1472.3 1561.8 940.58 995.35 1066.7 1064.7 1102.0 1223.3 1102.2 1596.8 True False 1190.0814126515572 1596.3758880372989 1667.793139866346 998.6774903878311 925.4400497710885 1058.0131488632585 1105.2177411261946 1080.0197454977244 1171.8889551403422 1032.6069038973708 1400.4037229491923 0.8498130882894934 1.1399397629959147 1.1909373793680316 0.7131354151820288 0.6608380387779533 0.7555058098782589 0.7892136553298014 0.7712202758382044 0.8368222220035181 0.7373637237429956 1.0 10.451627086926173 -4.251893657918768 13.07392277634041 0.892579420752839 1.066091984079748 0.0 0.17079478536959433 78225787.62175474 0.0 0.023508136887266443 0.0 5.598946814700959e-05 4.251893657918768 0.173512563326909 GLLSDSMT(ph)DVPVDTGVAAR ddPTM_A549_PD325901_60min_R1 3 GLLSDSMTDVPVDTGVAAR 19 0 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;A0A087WYR3 O43399-2 TPD52L2 Tumor protein D54 1 GLLS(0.001)DS(0.373)MT(0.627)DVPVDTGVAAR;GLLS(0.025)DS(0.149)MT(0.826)DVPVDTGVAAR;GLLS(0.028)DS(0.213)MT(0.759)DVPVDTGVAAR 191.02 3.1993e-44 59395000.0 6460.700000000001 7916.1 7350.4 7015.9 7920.6 7633.4 7380.1 7344.400000000001 7982.099999999999 8335.8 8399.8 True False 7116.585507884041 8583.217528555368 7849.2423455458975 7449.256208735023 7364.284380586605 7571.236121245706 7660.9537440456825 7197.910180429662 7646.6400955004665 7809.476165403475 7366.677850719323 0.9660508647312627 1.165140882021501 1.0655063930587727 1.0112097148387773 0.9996750950453895 1.027768048864307 1.039946893197946 0.9770903962804371 1.0380038669335603 1.060108277252943 1.0 12.8467984387389 -6.208780445527579 5.476190502020497 1.0159860237343905 1.076541346134954 0.14513511914293287 0.04797963644277117 0.21010636728782636 14.344665955488695 0.005761675182798098 0.015447414989442932 6.183289129016032e-07 6.208780445527579 0.060555322400563494 GLLSGQT(ph)SPTNAK ddPTM_A549_PD325901_60min_R1 1 GLLSGQTSPTNAK 13 0 G3V1P3;Q969J3 G3V1P3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein 1 GLLSGQT(0.704)S(0.273)PT(0.023)NAK 149.41 1.0353e-12 9219300.0 3102.5 2990.8 3363.1 3893.5 3702.9 3344.9 3474.6 3770.1 3263.3 4189.0 4281.5 True False 3417.463516060213 3242.8452122135136 3591.3401899631885 4133.992652219932 3442.8210783115087 3317.6602433980597 3606.8278043740747 3694.9023979137633 3126.1548494314375 3924.505825100789 3754.902642664682 0.9101337215057581 0.863629638586905 0.9564402946582337 1.1009586787278798 0.9168869091818308 0.8835542646835894 0.9605649327340414 0.984020825448529 0.832552837432011 1.045168463360144 1.0 11.874559786605168 GLLSGQTS(ph)PTNAK ddPTM_A549_MK2206_60min_R1 2 GLLSGQTSPTNAK 13 0 G3V1P3;Q969J3 G3V1P3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein 1 GLLSGQT(0.089)S(0.87)PT(0.04)NAK;GLLS(0.002)GQT(0.044)S(0.857)PT(0.097)NAK 158.31 1.8682000000000002e-18 15532900.0 6518.200000000001 7006.6 7063.2 5765.1 7761.700000000001 6442.200000000001 5695.0 5726.0 9613.400000000001 9029.9 9966.4 True False 7618.312805310278 7363.206012391709 8064.867968542425 7177.549758805174 6619.964211861818 7123.909328013734 6729.707782725974 6537.678035139554 7435.980249445252 6990.039318462084 7491.467821353183 1.0169319266907273 0.9828789481554088 1.0765404271716765 0.9580965880073278 0.8836671757426109 0.9509363849509191 0.898316317069942 0.8726831898690119 0.9925932309620589 0.9330667213891167 1.0 12.871032701759804 GLLSGQTS(ph)PTNAK ddPTM_A549_PD325901_60min_R1 1 GLLSGQTSPTNAK 13 0 G3V1P3;Q969J3 G3V1P3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein 1 GLLSGQT(0.188)S(0.777)PT(0.035)NAK 147.52 1.3789e-12 9569300.0 3602.1 3179.2 3711.2 4059.6 4651.2 3350.4 3198.2 4530.7 3507.4 4139.1 4364.0 True False 3967.7825402741323 3447.122341403371 3963.0643492585327 4310.352271979458 4324.515757768909 3323.1154532215783 3319.909251122193 4440.331634234607 3359.996175312053 3877.756519616775 3827.25566567527 1.036717399325887 0.9006773109826126 1.0354846123297334 1.1262253291926219 1.129926018936575 0.868276316898536 0.8674385881499342 1.1601868341479529 0.8779126530391391 1.0131950562891374 1.0 11.902094562799881 -7.264529097194473 24.993958643605172 0.948286634518177 1.0416377353098685 0.13532318666089505 0.09749658639708736 381.5529082623847 3086538.7684729607 0.01494061894105312 0.024532376981227257 5.4383969391125185e-08 7.264529097194473 0.09335110079169151 GLLSNHTGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 GLLSNHTGSPR 11 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 GLLS(0.003)NHT(0.201)GS(0.796)PR;GLLSNHT(0.004)GS(0.996)PR 92.45700000000001 9.015399999999999e-05 13927900.0 2394.2 2613.7 2305.6 2367.6 2916.9 2334.4 2098.69 2669.2 2180.0 2430.3 2685.5 True False 2637.2574214831156 2833.965671780947 2462.071880699094 2513.8412747902685 2712.0270067587135 2315.3894203678547 2178.5567963972344 2615.960712053109 2088.38218115421 2276.8504432424065 2355.200524787109 1.1197591855672258 1.2032799933403187 1.0453767544577315 1.067357640393486 1.1515057755024316 0.9830965117406074 0.9249984336659225 1.1107167667982627 0.8867109866761697 0.9667331589305821 1.0 11.201634182631809 -7.290673410911501 0.9311015772122103 0.9535062802561762 1.1311801300005486 0.45813740554151505 0.06952554536977952 0.34374551676092363 0.5881258308786761 0.012859075024731742 0.029885974449351704 5.1206676456927026e-08 7.290673410911501 0.1776738497443724 GLLSQGS(ph)PLSWEETK ddPTM_A549_MK2206_60min_R1 2 GLLSQGSPLSWEETK 15 0 P48506;E1CEI4;A0A0C4DGB2;D6RGF8 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLS(0.004)QGS(0.994)PLS(0.003)WEETK;GLLSQGS(0.922)PLS(0.077)WEETK 103.21 6.2242e-06 2374600.0 1370.6399999999999 1615.27 1246.63 1000.86 2351.1 2121.6 1645.3400000000001 1753.63 2095.2 2086.69 2450.7 True False 1601.970523069324 1697.480343624007 1423.4208794348233 1246.070744930313 2005.2563044833382 2346.1063037959 1944.2769803740744 2002.2124227666402 1620.6405453468794 1615.305279730855 1842.1235541208691 0.8696325061832483 0.9214801796691149 0.7727065191966092 0.676431687843536 1.0885568994531 1.2735879189794903 1.0554541664833967 1.0869045229282526 0.8797675604991166 0.8768713022084665 1.0 10.84715411315949 -6.770481462757663 24.99998359769638 0.9954860211777291 0.8153528021556615 0.4255464628448633 0.12089219320285104 191.2625433167886 528812.9321327411 0.01974301941682373 0.03769484781192968 1.6963620075146596e-07 6.770481462757663 -0.18013321902206758 GLLSQGS(ph)PLSWEETK ddPTM_A549_PD325901_60min_R1 2 GLLSQGSPLSWEETK 15 0 P48506;E1CEI4;A0A0C4DGB2;D6RGF8 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLS(0.002)QGS(0.996)PLS(0.002)WEETK;GLLS(0.005)QGS(0.795)PLS(0.2)WEETK 98.439 2.5906999999999997e-09 1009600.0 2272.7 2025.4 2728.5 2567.7 2527.5 2727.6 2553.7 2600.1 2565.6 2929.7 2953.8 True False 2503.4228309266878 2196.0875661419195 2913.6724178033846 2726.3009973301964 2349.9771194016416 2705.3873299328966 2650.8824509382607 2548.238965761009 2457.77675411433 2744.718242014268 2590.501325680938 0.9663854660520736 0.8477461657212845 1.1247523361284126 1.052422158716156 0.9071514830373336 1.0443489463267346 1.0233086641024787 0.9836856443573446 0.9487649088418357 1.0595316878646233 1.0 11.339015606544937 -5.714670419551371 24.999999775857376 0.9915953455874286 0.9070660192859437 0.23418750685286438 0.06464654038370417 138.85207801341505 74220.34717469783 0.008240049054625284 0.031913412663948544 1.928988242024022e-06 5.714670419551371 -0.08452932630148491 GLLSQGS(ph)PLSWEETKR ddPTM_A549_MK2206_60min_R1 2 GLLSQGSPLSWEETKR 16 1 P48506;E1CEI4;A0A0C4DGB2;D6RGF8 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLS(0.154)QGS(0.841)PLS(0.005)WEETKR;GLLSQGS(0.999)PLS(0.001)WEETKR 132.13 1.6026e-10 34641000.0 3371.6 4034.7 3904.7 3397.3 5154.0 3095.86 4110.8 3789.9 5997.9 5646.1 5602.7 True False 3940.6436522942113 4240.048996402939 4458.445174533861 4229.6386525105945 4395.853427462513 3423.4618503344504 4857.679148942919 4327.129931081977 4639.385226678148 4370.642088613247 4211.394963346393 0.9357098269317772 1.0068039291745219 1.0586623228972 1.0043319824720751 1.043799849152488 0.8129044841745626 1.153460834526664 1.0274813853231235 1.1016267215629836 1.0378133912047793 1.0 12.040082468870258 GLLSQGS(ph)PLSWEETKR ddPTM_A549_PD325901_60min_R1 4 GLLSQGSPLSWEETKR 16 1 P48506;E1CEI4;A0A0C4DGB2;D6RGF8 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLS(0.006)QGS(0.993)PLS(0.002)WEETKR;GLLS(0.023)QGS(0.934)PLS(0.043)WEETKR;GLLS(0.001)QGS(0.956)PLS(0.042)WEETKR;GLLSQGS(0.999)PLS(0.001)WEETKR 115.42 7.3342e-08 53481100.0 11633.900000000001 11248.4 10772.7 11676.7 13137.099999999999 12023.2 11301.9 11566.7 13890.1 14274.2 15400.199999999999 True False 12814.964963575476 12196.342144263232 11503.80020350761 12397.943239290213 12214.395416534639 11925.287045479256 11731.999989136988 11335.993094599386 13306.347401123894 13372.924575949795 13506.073029911162 0.9488298290106142 0.9030265212732568 0.8517501851227053 0.9179532208831661 0.9043631993906803 0.8829573939863181 0.8686462721736191 0.8393256181492712 0.9852121613480879 0.9901415864058717 1.0 13.72132064312347 -8.83697007628109 7.929833020251698 0.9933286317119342 0.889391044807522 0.7112977407608805 0.029001156958105095 0.09116853577573443 8.389983935335962 0.005060408491466336 0.005380013539475686 1.4555593679461723e-09 8.83697007628109 -0.10393758690441224 GLLYDS(ph)DEEDEER ddPTM_A549_MK2206_60min_R1 2 GLLYDSDEEDEER 13 0 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEER;GLLYDS(1)DEEDEER 142.38 2.4724e-12 4926400.0 2375.3 2781.7 2794.2 2959.2 3316.6000000000004 2974.1000000000004 3065.6 2983.1000000000004 4395.1 4174.8 3510.9 True False 2776.1925694905785 2923.2766483986575 3190.4595760705097 3684.2041328435334 2828.732533473453 3288.817287952199 3622.579838230859 3405.963560360601 3399.6168675324902 3231.7097804754785 2639.046634089428 1.051967984812997 1.1077017778457332 1.208943993205084 1.3960360098428972 1.0718766758168612 1.2462141613829294 1.3726850414224632 1.2906037795485144 1.2881988607622645 1.2245747152514952 1.0 11.365801129140257 -10.803164978282467 1.0610876775319855 1.000618070960161 1.2321399706238638 0.002271033259186206 0.12547996335440242 0.4432048369934595 0.8895368515231183 0.07557501998352704 0.01906543353785035 1.5733850588646332e-11 10.803164978282467 0.23152189966370273 GLLYDS(ph)DEEDEER ddPTM_A549_PD325901_60min_R1 1 GLLYDSDEEDEER 13 0 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEER 111.12 4.6591e-05 4745200.0 5738.8 5055.0 5003.9 5251.0 5738.5 5515.9 5114.8 5796.4 6594.5 6085.6 6829.7 True False 6321.398751318727 5481.002590524041 5343.494744895126 5575.342344113743 5335.44755675028 5470.980339190818 5309.446512925954 5680.78625481217 6317.356097991487 5701.354177425006 5989.690197035383 1.055379918388354 0.9150728018014824 0.8921153797803945 0.9308231579111182 0.8907718732082466 0.9133995514323425 0.8864309068195017 0.9484273923923301 1.0547049830921613 0.9518612799451481 1.0 12.548265669519342 -8.630305375501257 5.228298373140057 1.0256281353599672 0.9225378024288865 0.26738384524135783 0.0505650152928033 0.12407886090198364 5.3095237509734154 0.007793068424533615 0.008836360990968817 2.3425810430013133e-09 8.630305375501257 -0.10309033293108072 GLLYDS(ph)DEEDEERPAR ddPTM_A549_MK2206_60min_R1 8 GLLYDSDEEDEERPAR 16 1 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLY(0.003)DS(0.997)DEEDEERPAR;GLLYDS(1)DEEDEERPAR 315.73 4.7680999999999984e-164 6580918300.0 50453.79999999999 57611.9 48781.2 48093.0 68206.8 53247.100000000006 49295.99999999999 49895.89999999999 76918.7 74594.7 78180.90000000001 True False 58969.167963021006 60544.099629679215 55699.10767740705 59875.78715897684 58173.67007300154 58881.67277943565 58252.44510224046 56968.796624785085 59496.73726392382 57743.70546173087 58766.42484692878 1.0034499821389564 1.0302498371711537 0.947804938321307 1.0188774851445814 0.9899133769755228 1.0019611186626898 0.9912538537774401 0.9694106247431923 1.0124273753065174 0.9825968758885396 1.0 15.842704511796533 GLLYDS(ph)DEEDEERPAR ddPTM_A549_PD325901_60min_R1 10 GLLYDSDEEDEERPAR 16 1 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLY(0.035)DS(0.965)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR 308.12 5.850099999999999e-144 9746457200.0 72847.6 72030.7 70373.2 72448.8 84197.19999999998 78245.79999999999 74569.8 76255.0 79476.80000000002 81112.4 86612.90000000002 True False 80243.03472443127 78100.97988076355 75149.14854042915 76923.79783283702 78283.47913657127 77608.59214711224 77407.59454516043 74734.03420410975 76136.66648401685 75990.9492212713 75960.06238441022 1.056384528995596 1.0281847780155684 0.9893244710637902 1.0126873967473806 1.0305873465506514 1.0217025856871909 1.019056489888393 0.9838595685441129 1.0023249599073905 1.0004066194246228 1.0 16.212953469892604 -2.0000000337975585 0.8528940257025236 1.0041057613394258 20.543644896487944 0.5059619326294704 0.014034640135034122 393.98587025875094 1.0167453395521602 0.002243835184066896 14947.674103767 0.009999999221782485 2.0000000337975585 19.53953913514852 GLLYDS(ph)DEEDEERPARK ddPTM_A549_MK2206_60min_R1 4 GLLYDSDEEDEERPARK 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK 248.46 1.3905999999999998e-86 1145900000.0 34396.0 37072.2 34473.4 33318.2 47921.1 34644.8 33703.0 31254.0 57759.2 48914.8 51676.2 True False 40201.20389853828 38959.016631831146 39362.246492630875 41481.16049571085 40871.96967069732 38310.889740643 39826.398841301765 35684.35021136074 44676.83342248928 37864.91270719601 38843.57334943522 1.0349512269865049 1.0029720046957937 1.013352868916814 1.0679027936628798 1.0522196118007663 0.9862864416720826 1.0253021389928545 0.9186680610031874 1.150173106386951 0.9748050820804972 1.0 15.24538830472411 -8.77248707586477 24.99988251085456 1.0709150630160562 1.0151000351353958 0.0 0.05680234784006602 312.76144606321185 707746.5482051553 0.01090661149473255 0.011664006699579337 1.688546108049514e-09 8.77248707586477 -0.055815027880660395 GLLYDS(ph)DEEDEERPARK ddPTM_A549_PD325901_60min_R1 8 GLLYDSDEEDEERPARK 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK 291.7 2.4395999999999993e-133 1979412000.0 68685.69999999998 68834.70000000001 69160.40000000001 73622.9 74944.50000000001 81531.0 77537.2 80833.40000000001 82313.1 83387.1 83383.0 True False 75658.6217002601 74635.64174440064 73854.04063927021 78170.41932326254 69680.65686448922 80867.03856751687 80487.92057598391 79221.11442442433 78853.76665851586 78122.02427506846 73127.41960838699 1.0346135841443367 1.020624577540005 1.009936369077077 1.068961816810738 0.9528663425790774 1.1058374410115548 1.1006530930123608 1.0833298214085822 1.0783064284340222 1.068300026083631 1.0 16.158124835191245 -7.2763308901264 24.986716212717443 1.0513116574360533 1.0200294844333566 0.24326676102879252 0.039661286846400495 1532.3431478041307 2571139.4513413836 0.007050268105082984 0.011295099082579873 5.292600455928837e-08 7.2763308901264 -0.031282173002696645 GLLYDSDEEDEERPAR ddPTM_A549_PD325901_60min_R1 2 GLLYDSDEEDEERPAR 16 1 P49736 P49736 MCM2 DNA replication licensing factor MCM2 0 ; 244.36 1.1799e-65 23993000.0 5006.8 5966.6 5960.7 5566.799999999999 6437.5 6564.0 6104.9 5974.700000000001 6788.6 6620.7 6783.0 False True 5515.086650188651 6469.426321784521 6365.228946600924 5910.6485928799 5985.352208169366 6510.544960287267 6337.225310229461 5855.529921438525 6503.298749992417 6202.667872104267 5948.7340009796935 0.927102581705683 1.0875299384237176 1.0700140476196514 0.9935977288455794 1.0061556302876615 1.094442104692368 1.0653065524842407 0.9843321151146078 1.093223995041868 1.042687044181628 1.0 12.53836695394896 GLMAGGRPEGQYS(ph)EDEDT(ph)DTDEYK ddPTM_A549_PD325901_60min_R1 2 GLMAGGRPEGQYSEDEDTDTDEYK 24 1 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 2 GLMAGGRPEGQY(0.003)S(0.999)EDEDT(0.554)DT(0.436)DEY(0.008)K;GLMAGGRPEGQY(0.004)S(0.996)EDEDT(0.949)DT(0.051)DEYK 93.147 1.0532999999999999e-07 4595800.0 1961.9 1462.8 1456.3 1938.8 1895.3 1859.9 1880.3 1774.5 2183.9 1751.5 2059.6 True False 2161.070643725556 1586.0752896970457 1555.133275443308 2058.555272665725 1762.1806664300423 1844.7535910478798 1951.8558454396405 1739.1062054316806 2092.118277716825 1640.9099910871398 1806.282256880107 1.1964191285686743 0.8780882852919051 0.8609580642891356 1.1396642273513529 0.9755843305872699 1.0212986281746588 1.0805929350216696 0.962809770625519 1.1582454900101975 0.9084460553365531 1.0 10.818807636386369 -7.5825354404615 1.0323941165863195 1.0692131146755648 0.9955175414198598 0.0 0.11406439450196271 1.0450449158806256 2.2379768159421247 0.018892598588872545 0.035304917367896226 2.614957046702171e-08 7.5825354404615 -0.07369557325570497 GLMAGGRPEGQYS(ph)EDEDT(ph)DTDEYKEAK ddPTM_A549_PD325901_60min_R1 9 GLMAGGRPEGQYSEDEDTDTDEYKEAK 27 2 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 2 GLMAGGRPEGQY(0.163)S(0.877)EDEDT(0.797)DT(0.163)DEYKEAK;GLMAGGRPEGQY(0.331)S(0.672)EDEDT(0.918)DT(0.079)DEYKEAK;GLMAGGRPEGQY(0.486)S(0.75)EDEDT(0.721)DT(0.042)DEYKEAK;GLMAGGRPEGQY(0.031)S(0.974)EDEDT(0.943)DT(0.052)DEYKEAK;GLMAGGRPEGQY(0.266)S(0.737)EDEDT(0.844)DT(0.154)DEYKEAK;GLMAGGRPEGQYS(1)EDEDT(0.703)DT(0.297)DEYKEAK;GLMAGGRPEGQY(0.032)S(0.846)EDEDT(0.855)DT(0.258)DEY(0.008)KEAK;GLMAGGRPEGQYS(1)EDEDT(0.999)DT(0.001)DEYKEAK;GLMAGGRPEGQY(0.01)S(0.865)EDEDT(0.896)DT(0.229)DEY(0.001)KEAK 193.97 3.0151000000000002e-59 418870600.0 38225.62 46105.399999999994 38668.909999999996 44457.63 46477.2 44634.64 44382.59999999999 44790.1 47420.899999999994 48750.299999999996 49263.00000000001 True False 42106.25680218588 49990.86386491535 41293.21476764573 47203.676834496575 43212.80180963563 44271.1502904077 46071.60413009059 43896.72631834629 45427.96448362187 45672.19773822174 43203.96330388659 0.9745924582432475 1.1570897677440213 0.9557737672629454 1.0925774680085931 1.0002045762720164 1.0247011363058238 1.0663744852765866 1.0160347098155549 1.051476786147886 1.057129815081412 1.0 15.398876043248205 -10.887737143955736 0.9927452302517084 0.998584428557654 1.0400411070234519 0.0 0.05572581927102782 1.2470057408686925 2.05482811336581 0.038500777488126005 0.008033406101339584 1.2949793885205109e-11 10.887737143955736 0.041456678465797925 GLMAGGRPEGQYS(ph)EDEDTDTDEYKEAK ddPTM_A549_MK2206_60min_R1 4 GLMAGGRPEGQYSEDEDTDTDEYKEAK 27 2 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 1 GLMAGGRPEGQYS(1)EDEDTDTDEYKEAK;GLMAGGRPEGQYS(1)EDEDTDTDEYKEAK;GLMAGGRPEGQY(0.098)S(0.894)EDEDT(0.006)DT(0.002)DEYKEAK;GLMAGGRPEGQYS(1)EDEDTDTDEYKEAK 201.63 2.669099999999999e-69 86941200.0 14680.98 17422.25 14154.49 14477.66 22322.37 16867.21 17049.0 18491.84 24973.300000000003 24469.22 25618.600000000002 True False 17158.770508499892 18308.96810855358 16161.809521471007 18024.687349926844 19038.778943264722 18652.08696665217 20146.582614169452 21113.114948884922 19316.887424165358 18941.60620738865 19256.794582609426 0.8910501919148978 0.9507796341706934 0.8392782844589586 0.9360170132470914 0.988678508335879 0.9685977012756131 1.0462064456128946 1.0963982015964338 1.0031206045896237 0.9836323551217907 1.0 14.233079956841108 -6.7675250489861565 2.084686037936106 1.0108052225693194 0.8977365938514804 0.6370380048522974 0.040234237171328534 0.16222579165472242 1.4361135087702226 0.005992199056571205 0.01368628358556608 1.7079492071113733e-07 6.7675250489861565 -0.11306862871783896 GLMAGGRPEGQYS(ph)EDEDTDTDEYKEAK ddPTM_A549_PD325901_60min_R1 6 GLMAGGRPEGQYSEDEDTDTDEYKEAK 27 2 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 1 GLMAGGRPEGQYS(1)EDEDTDTDEYKEAK;GLMAGGRPEGQYS(0.999)EDEDT(0.001)DTDEYKEAK;GLMAGGRPEGQY(0.001)S(0.989)EDEDT(0.009)DTDEYKEAK;GLMAGGRPEGQY(0.001)S(0.991)EDEDT(0.008)DTDEYKEAK;GLMAGGRPEGQYS(0.999)EDEDTDTDEYKEAK;GLMAGGRPEGQYS(0.999)EDEDT(0.001)DTDEYKEAK 142.37 6.6061e-33 190657000.0 33812.89 32801.61 33995.0 32755.69 39639.69 38264.92999999999 35785.509999999995 36508.37 37867.829999999994 39571.39 41491.29000000001 True False 37245.54970106602 35565.9167919603 36302.1051285417 34778.934577730535 36855.53492390666 37953.313096777085 37147.34716563243 35780.18192008779 36276.376794026066 37072.84568210435 36388.124364957795 1.0235633287252897 0.9774045079996129 0.9976360629211508 0.9557770614641262 1.012845140196316 1.0430137238215715 1.0208645763947586 0.9832928337066072 0.9969290098656653 1.018817164366019 1.0 15.151180068566 -11.81768874734786 23.546288018604447 1.0000000163479512 0.9996634138359327 0.0 0.02360439489209346 884.8959223781279 4003238.25800007 0.032277555705882116 0.0031011154776835114 1.5216376750281506e-12 11.81768874734786 -0.00033660251201850233 GLMEDT(ph)TQLETDK ddPTM_A549_MK2206_60min_R1 1 GLMEDTTQLETDK 13 0 O75509 O75509 TNFRSF21 Tumor necrosis factor receptor superfamily member 21 1 GLMEDT(0.873)T(0.127)QLETDK 46.408 0.0098068 6506400.0 916.43 1284.0 1241.1 893.43 1420.8 992.29 1392.7 1098.1 1769.3 2220.5 2044.3 True False 1071.1009794376503 1349.3501155925778 1417.1066422808349 1112.3203901075972 1211.802202122379 1097.2934691712073 1645.7355625992022 1253.7590377902095 1368.5563749915214 1718.8875077957741 1536.6438901902702 0.6970391684601853 0.8781150429235095 0.9222088808782924 0.7238634775490289 0.7886031434207774 0.7140844252700204 1.0709934638112049 0.8159073457383589 0.8906138785493521 1.118598472143691 1.0 10.585567150808297 -7.750068488568869 24.99969778883833 0.9433559054746786 0.7947515053800898 0.45204683042900085 0.10159967817247331 172.34385902500836 378908.931278775 0.013654498746432861 0.020153112943551283 1.7779989961398496e-08 7.750068488568869 -0.14860440009458886 GLNGCES(ph)PDADDYFEHS(ph)PLSEDR ddPTM_A549_PD325901_60min_R1 2 GLNGCESPDADDYFEHSPLSEDR 23 0 Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 2 GLNGCES(0.693)PDADDY(0.323)FEHS(0.926)PLS(0.058)EDR;GLNGCES(0.907)PDADDY(0.114)FEHS(0.938)PLS(0.041)EDR 48.422 0.0040044 2404000.0 377.8 0.0 162.18 341.35 580.34 248.99 362.73 422.98 620.53 343.0 317.68 True False 416.15397787833973 0.0 173.1865100675656 362.4344142379025 539.5789204643122 246.96230799237142 376.5338886434724 414.54333207860947 594.4512820512023 321.34292146325396 278.60737393944095 1.4936933362316405 0.0 0.6216149544742847 1.3008787567721825 1.9367000694733834 0.8864169835147723 1.3514857245857286 1.487912276753723 2.133652364062748 1.1533898651695491 1.0 8.122089632226018 -6.336912254487553 4.240261474306292 1.50490087261216 0.6326969757460891 0.28645195679200763 0.4784716831307104 0.19454599231067202 6.629802960347523 0.07521789525172802 0.1843892935087676 4.60349573908628e-07 6.336912254487553 -0.8722038968660709 GLNGGITPLNSIS(ph)PLKK ddPTM_A549_MK2206_60min_R1 2 GLNGGITPLNSISPLKK 17 1 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0;H0YBG1 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 GLNGGITPLNS(0.037)IS(0.963)PLKK;GLNGGITPLNS(0.024)IS(0.976)PLKK 157.97 1.4555000000000002e-22 15001800.0 6356.5 7065.9 7516.0 6830.2 10480.7 7914.799999999999 7622.1 7892.6 12226.9 10964.0 10928.7 True False 7429.321798495715 7425.52412910093 8581.881817244988 8503.599306619328 8939.002913699336 8752.338882580967 9006.93690793953 9011.400220073774 9457.526672347154 8487.224785171293 8214.802173224283 0.9043823140027887 0.9039200180990403 1.0446851471624212 1.035155701537934 1.0881580256230086 1.0654351374533104 1.0964277310654136 1.0969710566428441 1.1512786885085884 1.0331624068605032 1.0 13.004010117640874 -5.820192124708524 2.42915179086322 1.075229999851404 0.8939829147213284 0.7265853018132639 0.038728279142587 0.15437513767533323 1.7708569359285382 0.007699204061575817 0.03615902169622262 1.51289182201155e-06 5.820192124708524 -0.1812470851300757 GLNGGITPLNSIS(ph)PLKK ddPTM_A549_PD325901_60min_R1 2 GLNGGITPLNSISPLKK 17 1 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0;H0YBG1 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 GLNGGITPLNS(0.047)IS(0.953)PLKK;GLNGGITPLNS(0.004)IS(0.996)PLKK 171.07 3.2613999999999996e-30 24882000.0 8747.900000000001 7980.6 9399.900000000001 9092.8 10726.6 11090.4 9764.3 11827.9 10315.0 10056.0 11159.6 True False 9635.980368136394 8653.15316991814 10037.833740190592 9654.441604752892 9973.200620761092 11000.083459410394 10135.885779729984 11591.983255691946 9881.496421378755 9421.062443832305 9787.03994653295 0.9845653456794085 0.8841440534820246 1.0256250914502996 0.9864516398722751 1.0190211417594233 1.123943860401547 1.0356436506954907 1.184421778088113 1.0096511790451275 0.9626059048803318 1.0 13.256656872766436 -5.784704323298919 23.576247780075242 1.027475440616502 0.9343547629666412 0.2656111326023033 0.0647272331763292 110.91122095173729 112395.85984430442 0.008829124408443915 0.027483494936547496 1.6417071010896139e-06 5.784704323298919 -0.09312067764986087 GLNISAVR ddPTM_A549_MK2206_60min_R1 1 GLNISAVR 8 0 E7EX17;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 71.342 0.017093 1074700.0 697.47 992.17 863.84 920.13 1183.7 851.85 658.11 740.62 1169.5 1203.7 1390.8 False True 815.1858844956826 1042.6672150992902 986.3455014647308 1145.5618913062046 1009.5792980379088 941.9922015877345 777.6800682861785 845.605153053625 904.61011730774 931.7833339940429 1045.4259758727335 0.7797643289044508 0.9973611132331581 0.9434866975075097 1.0957847975318162 0.9657109363435326 0.9010606425781115 0.7438882199545142 0.80886181572799 0.8653028891429269 0.8912953719331296 1.0 10.029875196401012 -7.258107047477611 21.750530797102677 0.9060340428172962 0.9657198022490995 0.10926485335849334 0.09508662385133917 115.39218078363588 753159.1483265108 0.01594285726671598 0.026850376847616573 5.519413767312484e-08 7.258107047477611 0.05968575943180332 GLNISAVR ddPTM_A549_PD325901_60min_R1 2 GLNISAVR 8 0 E7EX17;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 114.5 0.0036709000000000004 3959900.0 2119.73 2202.8 1929.9 2030.92 2561.3 2325.9 2216.3 2528.8 2182.9 2379.2 2340.5 False True 2334.923429137251 2388.4376867272713 2060.874619431465 2156.365315846025 2381.403124005313 2306.958641549688 2300.642509305895 2478.3611001947775 2091.1603042392303 2228.9769059631867 2052.633337651918 1.1375258241728914 1.1635968504046088 1.0040149799910074 1.050536048641191 1.1601697586815418 1.123901964969887 1.1208248775388614 1.2074056553275438 1.0187695317427636 1.085910895568419 1.0 11.003260226188228 -8.903481955447354 10.030148647473093 1.0082644885370864 1.117534824663845 0.28117909753103376 0.057162510513428286 0.20956646139543914 20.12831887653704 0.009271682289442 0.009859850787684483 1.2488723330562761e-09 8.903481955447354 0.10927033612675863 GLNNDS(ph)PER ddPTM_A549_MK2206_60min_R1 2 GLNNDSPER 9 0 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 GLNNDS(1)PER;GLNNDS(1)PER 161.27 7.4401999999999995e-06 158460000.0 5619.7 6476.299999999999 6085.7 6462.799999999999 8271.0 7081.4 6548.6 6761.1 9848.0 10039.099999999999 10064.7 True False 6568.1679715262135 6805.916007486152 6948.743769985079 8046.186290126116 7054.34685652745 7830.749047747114 7738.395853548605 7719.506630000356 7617.443724024473 7771.26033754224 7565.357218411201 0.8681900645143089 0.8996159481964899 0.9184951310791354 1.0635566910898484 0.9324539017615525 1.0350798807873935 1.0228725002854187 1.0203756950450422 1.006884870616091 1.0272165759245246 1.0 12.88519248938608 -6.083782467736653 5.159278541854506 1.0063104841032684 0.8890388640074744 0.7338835319930876 0.03180869148615454 0.07475509393284617 3.359667633995477 0.0038907055513445928 0.010762765113151485 8.245510181077101e-07 6.083782467736653 -0.11727162009579395 GLNNDS(ph)PER ddPTM_A549_PD325901_60min_R1 2 GLNNDSPER 9 0 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 GLNNDS(1)PER;GLNNDS(1)PER 183.08 5.1655e-11 205523000.0 7189.0 7087.599999999999 7265.0 7088.599999999999 9067.0 8170.3 7462.799999999999 7971.5 7484.3 7734.0 8263.6 True False 7918.8219877379115 7684.896925934364 7758.046587993978 7526.446722621346 8430.165199451907 8103.7637856543315 7746.800937800857 7812.502178979226 7169.760898354335 7245.673920107306 7247.229587276388 1.0926688457118299 1.0603909857397602 1.0704844512742369 1.0385274306522823 1.1632259055587728 1.1181878106748155 1.06893273415838 1.0779984385613035 0.9893105788923727 0.9997853431921333 1.0 12.823213883300811 -8.731330691296218 5.7406584565223255 0.9948589120517259 1.086794474938075 0.6250350020862012 0.031043826381035044 0.08268628197963296 7.545985520414594 0.005465842792633399 0.006107808785508667 1.856390377898038e-09 8.731330691296218 0.09193556288634896 GLNNDS(ph)PERR ddPTM_A549_MK2206_60min_R1 8 GLNNDSPERR 10 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR 167.71 1.0017e-10 328997000.0 13999.39 14667.78 14774.939999999999 13491.960000000001 19169.790000000005 15758.31 14735.53 15002.61 22707.809999999998 22965.719999999998 22883.040000000005 True False 16362.144779775484 15414.307350846195 16870.248661107737 16797.490805677106 16349.939285067265 17425.843904680412 17412.7850612102 17129.27591106619 17564.527291921204 17777.747901614755 17200.549628224602 0.9512570896529162 0.8961520232791085 0.980797069032325 0.9765670963277759 0.9505474905428859 1.0130980858940764 1.0123388750692792 0.9958563116470733 1.0211608158787755 1.033556966833375 1.0 14.070167045246874 -6.462470074861413 0.7121550998668935 1.010071510561102 0.9216205324274587 0.6453168402086606 0.02260836842061005 0.4287231043914967 0.3339631892271318 0.003627706296438132 0.022116023150378892 3.4477036221788003e-07 6.462470074861413 -0.08845097813364333 GLNNDS(ph)PERR ddPTM_A549_PD325901_60min_R1 7 GLNNDSPERR 10 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR 128.68 5.9808e-07 471786000.0 17510.999999999996 15901.9 15954.52 17035.15 19510.6 16852.53 17500.95 17359.67 19188.04 17921.410000000003 18137.2 True False 19288.703829083126 17242.00892072291 17037.2896695226 18087.3725258673 18140.24276391601 16715.288583118516 18166.958229137294 17013.41776345234 18381.63340700653 16789.849114113036 15906.439381183663 1.2126349189058911 1.0839640794230256 1.0710938671590238 1.1371100780268617 1.1404339041064586 1.0508504249475008 1.142113441844671 1.0695930972193666 1.1556095595316491 1.0555378681400183 1.0 13.95732330748705 -10.905573144044446 1.0605655379277195 0.9973815141594577 1.11756211442711 0.33261068718863884 0.04734267967525488 0.3597002606208215 0.6921300577141715 0.03333910806920139 0.007251557741937422 1.2428732930160824e-11 10.905573144044446 0.1201806002676522 GLNPDGTPALSTLGGFS(ph)PASKPS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 2 GLNPDGTPALSTLGGFS(0.99)PAS(0.017)KPS(0.657)S(0.335)PR 143.23 1.0093e-32 17832000.0 2958.2 3092.7 2896.3 3306.2 4250.3 3100.8 3713.1 3245.9 3106.8 3836.2 3274.1 True False 3258.514286288261 3353.332682831594 3092.8603348667557 3510.4164650750063 3951.77359073899 3075.548112866963 3854.4040523862827 3181.157978140709 2976.2320001880285 3593.981677310012 2871.4064562299277 1.1348147104769675 1.167836296932487 1.0771238353094708 1.222542513080534 1.3762501585817122 1.071094656834152 1.3423401079368618 1.107874495175955 1.0365066895112207 1.251645049941416 1.0 11.487541847489485 -8.602228767608405 3.626098973127875 1.0171551385769309 1.1974551876040087 0.038775292259061955 0.11497857611407877 0.15073998337759295 3.9482759934788696 0.014946275537412089 0.017062060188864053 2.4990286343906272e-09 8.602228767608405 0.18030004902707786 GLNPDGTPALSTLGGFS(ph)PASKPSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 2 GLNPDGTPALSTLGGFS(1)PAS(0.003)KPS(0.24)S(0.757)PR 204.75 4.0707999999999995e-69 19472000.0 3275.2 2702.0 3490.3 3227.5 3477.0 3252.6 2906.8 3621.0 3668.4 3287.9 3696.8 True False 3607.6958929251955 2929.707022669826 3727.1727468789227 3426.8553448156727 3232.787514998817 3226.1119039960936 3017.419864661993 3548.776314380454 3514.2299052046355 3080.3014328834743 3242.1170359459984 1.112759302926437 0.9036401185359997 1.1496107961418465 1.0569807649820915 0.9971223984687342 0.9950633700842836 0.9306943059757735 1.0945861222881417 1.0839306126958612 0.9500895244470072 1.0 11.662720455755446 -4.899157698684394 20.72905005452306 1.0323379001607247 11.01525996648939 0.09153977599592178 0.07275828509263857 1341.6569264822365 274947.9668352845 0.008958929346126644 1936.9436487390017 1.2613694297171968e-05 4.899157698684394 9.982922066328666 GLNPDGTPALSTLGGFS(ph)PASKPSSPR ddPTM_A549_PD325901_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 GLNPDGT(0.001)PALS(0.045)T(0.045)LGGFS(0.885)PAS(0.02)KPS(0.002)S(0.003)PR 56.977 0.00086832 3523200.0 2144.3 1562.6 2186.5 2341.3 2255.5 2524.0 2824.6 2242.3 2431.6 2887.7 2711.9 True False 2361.987757449771 1694.285785945177 2334.889038492613 2485.916783521902 2097.0814610525836 2503.445380829534 2932.091698680429 2197.5755674496786 2329.408308116778 2705.3701291820335 2378.353492150498 0.9931188804545916 0.7123776139825246 0.9817249816726846 1.045225948004115 0.8817366585639087 1.052596003534331 1.23282418208962 0.9239903045121519 0.9794205595613694 1.1374970701835614 1.0 11.215747441912033 -5.967627729788811 24.511616553511047 1.0027032403013312 0.8513236973094838 0.24701978063080898 0.11127868857537895 147.842680489396 111941.54135386746 0.013214309899177597 0.04108445655222834 1.0773883378010795e-06 5.967627729788811 -0.15137954299184742 GLNPDGTPALSTLGGFSPAS(ph)KPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 2 GLNPDGT(0.001)PALS(0.054)T(0.057)LGGFS(0.414)PAS(0.482)KPS(0.496)S(0.496)PR 58.284 0.00057582 6369900.0 662.65 819.98 1215.7 889.84 1342.7 1076.5 560.84 979.88 1536.5 1406.8 1564.7 True False 774.4891197629488 861.7134795822445 1388.1045403438986 1107.8508399464351 1145.190608663935 1190.4145154771327 662.7373683694531 1118.7809907566443 1188.4852032863116 1089.002902934967 1176.1418064768945 0.6584997791064948 0.7326612104398255 1.180218688511663 0.9419364517489406 0.9736841275069772 1.0121351940060628 0.5634842369515521 0.9512296770641346 1.010494820217633 0.925911226807803 1.0 10.199846299910558 -5.601375396649867 8.164700535117433 0.9748556076938404 0.6768681295483091 0.32182515610049756 0.14114372859791208 0.16827482835524327 15.104567349443668 0.018932181530398082 0.0739994710134144 2.503943951433914e-06 5.601375396649867 -0.2979874781455313 GLNPDGTPALSTLGGFSPASKPSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 GLNPDGTPALSTLGGFS(0.002)PAS(0.004)KPS(0.204)S(0.79)PR 187.76 6.8874e-58 34976000.0 6261.4 5468.0 6149.5 5536.4 6485.2 8382.9 6188.2 6603.9 7449.8 7354.6 6997.2 True False 6897.05271860094 5928.807549947673 6566.842049947551 5878.370853923311 6029.701924725429 8314.632441741633 6423.69533731297 6472.180033840672 7136.71081337735 6890.229300856109 6136.588758905361 1.1239229137836557 0.9661406007276994 1.0701127789307716 0.9579215888294085 0.9825820438065337 1.3549274309241457 1.0467860222816727 1.0546869422280096 1.1629768742480293 1.12281099020316 1.0 12.58322118973322 GLNSSFET(ph)SPK ddPTM_A549_MK2206_60min_R1 1 GLNSSFETSPK 11 0 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNSSFET(0.5)S(0.5)PK 118.76 1.5963e-05 17952000.0 8269.9 9815.0 9474.0 8359.9 12416.0 9211.9 8292.6 8617.8 13723.0 13824.0 14005.0 True False 9665.656940357067 10314.541576745445 10817.55565947034 10408.075875290175 10589.62284737574 10186.697143635669 9799.258078846948 9839.399540905626 10614.762411127922 10701.14879881503 10527.171981663523 0.9181627275770678 0.9798017544228932 1.0275842057404034 0.9886867900913187 1.0059323497156687 0.9676575210682506 0.9308538034636014 0.9346669322059262 1.0083204140311344 1.0165264533964624 1.0 13.361830302522614 GLNSSFET(ph)SPKK ddPTM_A549_MK2206_60min_R1 1 GLNSSFETSPKK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNSS(0.001)FET(0.521)S(0.478)PKK 65.472 0.003624 8174800.0 3570.9 3577.1 4316.0 2964.0 4287.0 4270.3 3569.8 3352.7 5294.3 4153.2 4471.5 True False 4173.580619877029 3759.1591109705705 4928.073699205611 3690.1801330590165 3656.3879789545595 4722.180311604273 4218.386451760348 3827.955492213128 4095.149503259827 3214.9892354773297 3361.103142878146 1.241729409203179 1.1184301555683784 1.4662072211760964 1.0979074358006993 1.0878535479347289 1.404949539144646 1.2550601015320528 1.1388985489255803 1.2183944762114944 0.9565279906061741 1.0 11.71471910027307 -10.690291740031359 0.5222784296814933 0.9568106522541638 1.233457071711767 0.4044946890784148 0.11551527672187832 1.2346351476442303 0.4629752396300705 0.17041876059292682 0.026331396317883244 2.0403668550205546e-11 10.690291740031359 0.27664641945760315 GLNSSFET(ph)SPKK ddPTM_A549_PD325901_60min_R1 1 GLNSSFETSPKK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNS(0.001)S(0.009)FET(0.573)S(0.417)PKK 65.092 0.0037564 13975000.0 5065.9 4596.6 4774.6 4499.4 5750.6 5997.4 5557.6 6249.6 5377.9 5127.0 5621.6 True False 5580.1864386815305 4983.971613769104 5098.633068002212 4777.317719121193 5346.697694493012 5948.559162831635 5769.097509235415 6124.946825283643 5151.885565151017 4803.280345020708 4930.178838258504 1.131842600795518 1.0109109176919029 1.034167975497459 0.9689948125307141 1.0844835187320783 1.20656052406668 1.1701598863852256 1.2423376567506361 1.0449693072332498 0.9742608742196014 1.0 12.267424264812753 -4.250994322073739 16.255419972666434 1.059932889694174 1.059695594962941 0.0 0.0930235384026007 0.0 0.0 0.013021825711021652 0.0 5.610553111702487e-05 4.250994322073739 -0.00023729473123301759 GLNSSFETS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GLNSSFETSPK 11 0 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNSSFET(0.08)S(0.92)PK 131.17 8.6837e-08 16024000.0 8131.0 8602.5 8392.9 7845.0 11405.0 8477.5 8868.8 7855.6 15087.0 12617.0 12497.0 True False 9503.31401613602 9040.330505751679 9583.139423091472 9767.025352175431 9727.339608112145 9374.58342309094 10480.14616039334 8969.15535676603 11669.81858898834 9766.810937112938 9393.650000346237 1.0116742710007016 0.9623874112212468 1.0201720761086746 1.0397476329025919 1.035522891288648 0.9979702695699122 1.115662831807344 0.9548104683946538 1.242309282180857 1.039724807370186 1.0 13.197470125631478 -8.733542915138626 24.999937587542963 1.1144239152830013 1.0195102392219122 0.1793861549617245 0.06935658498032442 268.5006192516797 240621.65880990497 0.015472360677158308 0.017542257368297766 1.846958277308921e-09 8.733542915138626 -0.09491367606108914 GLNSSFETS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GLNSSFETSPK 11 0 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNSSFET(0.16)S(0.84)PK;GLNSSFET(0.041)S(0.959)PK 182.55 1.5012000000000001e-18 91191000.0 32430.0 31538.0 34146.0 33815.0 39035.0 36402.0 35390.0 37834.0 36954.0 37658.0 38831.0 True False 35722.269726295825 34195.81794262062 36463.352896578464 35903.67575056297 36293.316263439396 36105.554181044616 36736.78581615108 37079.37118980115 35400.95189099664 35280.2674532455 34055.03316999001 1.0489571261899406 1.0041340371606118 1.0707184666233334 1.0542839753332562 1.0657254709539323 1.0602119810255115 1.0787476151549982 1.088807372605241 1.039521873735618 1.0359780675337937 1.0 15.055580416928157 -9.77234754881256 1.0187236075378832 1.0063623824580183 1.0574930469030495 0.27385001754076077 0.023040908831176023 0.2931179432358837 0.6257857753414117 0.0071936465436173115 0.004462661850401851 1.6890886793242026e-10 9.77234754881256 0.051130664445031115 GLNSSFETS(ph)PKK ddPTM_A549_MK2206_60min_R1 1 GLNSSFETSPKK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNS(0.001)S(0.003)FET(0.315)S(0.681)PKK 75.764 0.00050765 11452000.0 3853.9 4247.8 4223.9 4212.9 5201.5 4206.7 4714.1 4333.9 6006.4 5921.1 5966.8 True False 4504.344101191322 4463.994876179249 4822.912534308291 5245.060689124267 4436.366240385382 4651.85020181854 5570.590949701229 4948.243597012102 4645.959990249858 4583.519397617453 4485.078884697601 1.0042954019291501 0.9952990774386852 1.0753239036136746 1.169446697363475 0.9891389548401437 1.0371835861549585 1.2420274186719944 1.1032679077049787 1.0358702956376438 1.021948446270525 1.0 12.13091764451369 -9.015883869154122 3.21956764057021 1.014255231985652 1.0783011712266066 0.11273872822699771 0.07277650568151421 0.36548136409000886 7.7764800192942 0.013981084756456567 0.014080760674329982 9.640867870792692e-10 9.015883869154122 0.0640459392409547 GLNSSFETS(ph)PKK ddPTM_A549_PD325901_60min_R1 1 GLNSSFETSPKK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNSSFET(0.12)S(0.88)PKK 75.764 0.00050765 14026000.0 5808.4 4968.2 5673.8 5439.7 6201.0 6390.0 6212.0 6354.3 6120.0 6118.4 6060.6 True False 6398.06449208192 5386.887649899414 6058.858187331072 5775.6979145449495 5765.463152288658 6337.961958597749 6448.401059336833 6227.558501648083 5862.797682873288 5732.083179827323 5315.184621308788 1.203733256307189 1.0134902235198313 1.1399149077608455 1.0866410719563615 1.0847155015415053 1.1924255524800784 1.2132035891067516 1.1716542218837613 1.1030280414661604 1.0784353862041163 1.0 12.37590408885887 -10.006893773899472 0.8955110619064292 1.010448492051211 1.1327756614141673 0.24327733664977702 0.0609654902403256 0.3823573924750152 0.6203992294919758 0.023848080714905004 0.011701076524731523 9.842518190363241e-11 10.006893773899472 0.1223271693629564 GLPARPKS(ph)PLDPK ddPTM_A549_PD325901_60min_R1 4 GLPARPKSPLDPK 13 2 Q8IYH5-2 Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 GLPARPKS(1)PLDPK;GLPARPKS(1)PLDPK;GLPARPKS(1)PLDPK;GLPARPKS(1)PLDPK 75.018 0.00022641 36081900.0 14888.6 15032.1 15113.600000000002 14619.6 16690.4 17114.0 16495.2 15920.599999999999 17196.6 17727.6 16994.7 True False 16400.07971159198 16298.907822159534 16139.299781459846 15522.619488479388 15518.123882754173 16974.629258128625 17122.93386251979 15603.05114353091 16473.88670478738 16608.276310588863 14904.459638279455 1.1003471517659917 1.0935591237604272 1.0828503798962912 1.0414748246633712 1.0411731964370334 1.1388959861739842 1.1488463371421114 1.0468713071259053 1.10529915908371 1.1143158969637152 1.0 13.863456450866043 -10.795141133638236 0.8889392023936682 0.996287782141408 1.0890772540396838 0.0 0.047840682827697434 0.47454465923805106 0.6208603892459258 0.030147509661810942 0.006430580565498429 1.6027244651375662e-11 10.795141133638236 0.0927894718982758 GLPPS(ph)MER ddPTM_A549_MK2206_60min_R1 15 GLPPSMER 8 0 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER 123.35 5.6313e-07 354461300.0 86897.93 99447.3 95055.25 88103.20999999999 129198.2 99278.58 92772.22 96819.08 150838.5 145991.9 146230.4 True False 101564.17613358826 104508.74279623828 108535.51378508213 109688.5004051036 110193.31592782066 109784.17343981199 109627.7315109335 110543.48108599706 116673.82058958821 113012.22839422194 109917.35592627268 0.9240049060287865 0.9507938206441007 0.9874283535157321 0.9979179309833236 1.0025106135352553 0.9987883397909424 0.9973650711218578 1.005696326612372 1.0614685879802954 1.0281563584009894 1.0 16.746059679939687 -4.349020857039719 0.42390873097756293 1.026073181291965 0.7306387237863882 0.7513877699931667 0.01699930641764038 4.647432440704475 0.31505411185772386 0.005439090695746297 0.8218473876427201 4.476918032125422e-05 4.349020857039719 -0.29543445750557684 GLPPS(ph)MER ddPTM_A549_PD325901_60min_R1 15 GLPPSMER 8 0 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER 153.24 0.00050497 488554000.0 127254.8 128407.1 132940.0 130170.3 148014.9 141263.4 133813.5 139907.1 145447.8 145865.0 160185.5 True False 140173.61361596768 139228.41696175662 141962.10783316204 138210.62379279934 137618.84404768428 140112.9977061311 138905.84596805702 137116.54313550345 139335.1347743491 136655.05900652328 140483.69899954775 0.9977927305033372 0.9910645715714307 1.0105237037759025 0.9838196515116268 0.9796072072968929 0.9973612504791902 0.9887684262108175 0.9760316970009799 0.9918242170915336 0.9727467313269079 1.0 17.100043211737972 -10.217806595318601 1.094715996538512 0.9991397697098252 0.9907391440003573 0.0 0.011960962605558184 0.7226523577127756 1.7218609323674805 0.003478156862058265 0.0016528125328853567 6.056105116857335e-11 10.217806595318601 -0.008400625709467868 GLPRPDS(ph)PIPLQPVLPGTQASEDTESGKPPPASQEAELLLPK ddPTM_A549_PD325901_60min_R1 1 GLPRPDSPIPLQPVLPGTQASEDTESGKPPPASQEAELLLPK 42 2 P52746 P52746 ZNF142 Zinc finger protein 142 1 GLPRPDS(0.997)PIPLQPVLPGT(0.001)QAS(0.001)EDT(0.001)ES(0.001)GKPPPASQEAELLLPK 53.193999999999996 0.00067727 9058000.0 1955.0 2593.2 1833.0 2421.3 2770.7 2807.2 2062.4 2658.8 2878.0 2801.3 3075.4 True False 2153.470160805067 2811.7380648361905 1957.3984027244285 2570.8582018287184 2576.095590396095 2784.3390939241926 2140.885760588583 2605.768148211749 2757.0476685145945 2624.4254399271513 2697.1452965668486 0.7984257146050616 1.0424866870966147 0.7257296836088024 0.9531774966299076 0.9551193232619556 1.0323281795268247 0.7937598924736019 0.9661207913153912 1.0222095457830895 0.9730382131313944 1.0 11.397217527032867 -7.718543721959997 0.4473512894437111 1.015274643425328 0.8725676350108216 0.1456457300201388 0.09587782339998698 1.223267952478029 0.5103466833401914 0.02930963085355388 0.06624002204101966 1.9118608411295967e-08 7.718543721959997 -0.14270700841450634 GLPS(ph)TAS(ph)GRLR ddPTM_A549_PD325901_60min_R1 1 GLPSTASGRLR 11 1 H7BYT1;P48730-2;P48730 H7BYT1 CSNK1D Casein kinase I isoform delta 2 GLPS(0.761)T(0.239)AS(0.999)GRLR 57.106 0.0040408 7726300.0 957.19 1269.5 1338.6 1257.9 1671.8 940.69 1081.4 1363.6 1154.0 1351.1 1562.2 True False 1054.3632241539651 1376.4852203106375 1429.445445655712 1335.5976261018238 1554.3785353968997 933.0293325247761 1122.553268764786 1336.401928276494 1105.5013931430997 1265.7913154198313 1370.0593036017212 0.7695748799940053 1.0046902471243568 1.0433456726273613 0.974846579699651 1.1345337616485835 0.6810138291619597 0.8193464807061478 0.9754336361668826 0.8069003949222266 0.9238952737974321 1.0 10.420022626870077 -7.234476498890014 24.999593905940564 0.8905493193071629 0.9891030727463844 0.18825608915047065 0.11638497314727785 1248.481328664307 1157574.4831305095 0.018228506302035218 0.03156703544191136 5.82805311464964e-08 7.234476498890014 0.09855375343922157 GLPSDYGRPLS(ph)FPPPR ddPTM_A549_PD325901_60min_R1 1 GLPSDYGRPLSFPPPR 16 1 O15357;O15357-2;H7BXR2;H0YFZ4 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 GLPS(0.012)DY(0.002)GRPLS(0.986)FPPPR 42.711000000000006 0.020865 5158800.0 949.68 937.6 1056.0 978.81 1244.5 1277.2 1068.3 987.49 1466.8 1125.6 1168.4 True False 1046.090814482535 1016.6148425074857 1127.6665102438608 1039.2688706612016 1157.090613291926 1266.7989066543107 1108.9547410961907 967.7937372790817 1405.1554969344008 1054.5294239039022 1024.6942070978428 1.0208809684259776 0.9921153408164183 1.100490763422639 1.014223427303876 1.1292057720996187 1.2362701944438246 1.0822299310513253 0.9444707802341192 1.3712925155633575 1.029116214963837 1.0 10.00097772441809 -6.8565987310287415 4.962181263521674 1.1571079277945162 1.034202925871552 0.025301964978431735 0.11714568019004638 0.34606046697267134 14.216242382572137 0.021561418972603507 0.041700564760652606 1.391237479699564e-07 6.8565987310287415 -0.12290500192296427 GLPSPYNMSS(ph)APGS(ph)R ddPTM_A549_MK2206_60min_R1 2 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 2 GLPS(0.006)PY(0.003)NMS(0.461)S(0.545)APGS(0.984)R;GLPS(0.001)PYNMS(0.127)S(0.872)APGS(0.999)R 62.357 0.0056221000000000005 5101800.0 4278.5 5070.6 4531.0 3955.6 5919.5 5088.4 4749.4 4569.299999999999 7108.1 6700.1 6895.200000000001 True False 5000.6062007179935 5328.671881716299 5173.563932136385 4924.7221775736325 5048.749391514236 5626.851110593441 5612.304502770631 5217.01226789437 5498.126699303243 5186.542756578458 5182.931542161105 0.9648219661093405 1.0281192870038227 0.9981926039445981 0.9501808267218964 0.9741107615342107 1.0856502859088963 1.0828436488340134 1.0065755693387095 1.0608140691379289 1.0006967513246077 1.0 12.339552622927062 -7.225438675296406 24.93775131467437 1.0356100282846243 0.9845982735105416 0.40712109102194616 0.03366254307457202 553.5810361400617 383466.76062538644 0.005398897970149925 0.00935077754117717 5.950607765910506e-08 7.225438675296406 -0.05101175477408271 GLPSPYNMSS(ph)APGS(ph)R ddPTM_A549_PD325901_60min_R1 1 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 2 GLPS(0.002)PY(0.002)NMS(0.179)S(0.834)APGS(0.984)R 49.265 0.029370999999999998 4525200.0 2630.7 2975.4 2759.7 3577.0 3102.6 3002.0 3251.5 3259.4 3633.7 3202.8 3716.5 True False 2897.7667273810152 3226.1474001672095 2946.9898374242234 3797.9431660435826 2884.684079388934 2977.5527073099292 3375.237611789071 3194.388710050164 3480.9882255321318 3000.574661406731 3259.39406083459 0.8890507478678482 0.9897997419008404 0.9041526683857387 1.1652298234448808 0.8850369196077786 0.9135295247324303 1.0355414377004841 0.9800560013391626 1.0679863068293132 0.9205927866968051 1.0 11.670388069154665 -7.7881784120600885 24.947829163073166 1.0284227808860815 0.9629371458989663 0.014204989269345325 0.08282443704629922 310.99510074704136 290160.90320177143 0.011579476896856138 0.016001846862318612 1.628626840711791e-08 7.7881784120600885 -0.06548563498711524 GLPSPYNMSS(ph)APGSR ddPTM_A549_MK2206_60min_R1 3 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 GLPS(0.001)PY(0.004)NMS(0.093)S(0.568)APGS(0.334)R;GLPSPYNMS(0.077)S(0.923)APGSR;GLPSPYNMS(0.048)S(0.952)APGSR 116.86 8.9788e-07 22296800.0 5583.7 6770.6 5940.7 5741.299999999999 8397.9 5103.0 6126.9 6232.700000000001 9307.4 9041.3 9881.0 True False 6526.092051641704 7115.194620429217 6783.180589636416 7147.918757736747 7162.58003463086 5642.996072902752 7240.078422121819 7116.204311843224 7199.288760863667 6998.864050544437 7427.274998273275 0.8786657358397149 0.9579818469200869 0.9132798490985454 0.962387788172449 0.9643617660980706 0.759766680810211 0.9747960623250148 0.9581177906429518 0.969304187947449 0.9423192290808626 1.0 12.85861728040879 -7.962479819668248 24.999882600311295 0.9822559440233739 0.9100793895157263 0.2232159642711613 0.05578249363407556 159.14986979665548 106042.00179341673 0.008273829931950598 0.011431929231996096 1.0902351510897503e-08 7.962479819668248 -0.0721765545076476 GLPSPYNMSSAPGS(ph)R ddPTM_A549_MK2206_60min_R1 3 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 GLPSPYNMS(0.002)S(0.009)APGS(0.989)R;GLPSPYNMS(0.008)S(0.022)APGS(0.97)R;GLPS(0.001)PY(0.003)NMS(0.101)S(0.083)APGS(0.812)R 68.413 0.00093182 22990000.0 5616.700000000001 5662.8 5670.289999999999 4460.72 7002.200000000001 6008.299999999999 5327.0 5731.0 8436.5 8456.5 8282.7 True False 6564.661644869169 5951.012332225583 6474.422385511721 5553.5966002493315 5972.18565575825 6644.094318013242 6294.846946195126 6543.3868004514125 6525.646220322144 6546.170776705676 6225.876999109205 1.0544155700166318 0.955851253257501 1.0399213454486937 0.8920183615969183 0.9592521112467765 1.067174041338092 1.0110779488730326 1.050998405748722 1.048148914804425 1.051445567852095 1.0 12.604061359296344 -7.2452596998074315 24.845009685261974 1.0274272511139175 0.9773426043925008 0.27540166058888793 0.04480963846049111 884.0314488572884 1357491.6621992611 0.0064150811397441455 0.01109388016798276 5.685128693385808e-08 7.2452596998074315 -0.05008464672141677 GLPSPYNMSSAPGS(ph)R ddPTM_A549_PD325901_60min_R1 6 GLPSPYNMSSAPGSR 15 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 GLPSPYNMS(0.012)S(0.012)APGS(0.975)R;GLPSPYNMS(0.001)S(0.011)APGS(0.988)R;GLPSPYNMSS(0.001)APGS(0.999)R;GLPSPYNMS(0.001)S(0.004)APGS(0.995)R;GLPSPYNMS(0.044)S(0.032)APGS(0.924)R;GLPSPYNMSS(0.001)APGS(0.999)R 107.34 4.2331e-06 61947400.0 15277.5 16429.600000000002 15994.3 16330.8 19068.6 19270.2 17366.6 17756.3 20879.1 19863.0 21704.199999999997 True False 16828.460553298926 17814.180051686213 17079.769379539182 17339.51642606222 17729.28731909878 19113.269880214448 18027.495466368167 17402.13666695212 20001.62403602609 18608.84679015921 19034.72099425968 0.8840928405713907 0.9358781805658436 0.8972954940968112 0.910941454371268 0.9314182921013353 1.0041266108380815 0.9470848283935834 0.9142312446922706 1.0507968066386684 0.9776264540873018 1.0 14.216345802974818 -7.818876301902897 0.6518441543977219 1.0222519524513016 0.9053645832528437 0.4192768902911246 0.03763662273473553 0.3693340610100688 0.3196567331117655 0.00896259083249422 0.01678428543245261 1.517482523470187e-08 7.818876301902897 -0.11688736919845788 GLPST(ph)AS(ph)GRLR ddPTM_A549_PD325901_60min_R1 1 GLPSTASGRLR 11 1 H7BYT1;P48730-2;P48730 H7BYT1 CSNK1D Casein kinase I isoform delta 2 GLPS(0.473)T(0.536)AS(0.99)GRLR 41.644 0.046222000000000006 7508300.0 853.16 1333.7 1085.1 1145.2 1317.8 1141.1 1362.0 1175.6 1233.5 981.93 1640.6 True False 939.7721751368038 1446.095579620557 1158.741411236376 1215.936403062095 1225.2422741631983 1131.8072599304992 1413.8316553149984 1152.1517357596413 1181.6602846117967 919.9307722227774 1438.816600620268 0.6531563332892266 1.0050590040434277 0.8053433708902492 0.8450947831279607 0.8515625088249617 0.7866237152411097 0.9826350729519672 0.8007634435569851 0.8212723456918607 0.6393662485032484 1.0 10.490666994712553 -10.773208464988153 0.8372827323279344 1.0084901489827998 0.8436022414892901 0.0 0.13982932595920233 0.6583558358679606 0.7500974162277138 0.07176727536213519 0.014860227579357203 1.685743660079739e-11 10.773208464988153 -0.16488790749350968 GLPSTAS(ph)GR ddPTM_A549_MK2206_60min_R1 4 GLPSTASGR 9 0 H7BYT1;P48730-2;P48730 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GLPSTAS(1)GR;GLPSTAS(1)GR;GLPS(0.001)T(0.002)AS(0.998)GR;GLPSTAS(1)GR 151.83 1.7249000000000002e-19 14839200.0 4443.299999999999 5308.3 4700.3 3760.0 6399.5 4885.7 4957.0 5202.6 7694.2 6962.6 8195.8 True False 5193.220411744829 5578.469796417513 5366.873217881406 4681.200168792813 5458.142027366391 5402.701531134817 5857.622735552705 5940.084482294283 5951.475985112623 5389.743824264291 6160.556667427196 0.8429790832382115 0.9055139166096208 0.8711669265632692 0.7598664246599327 0.8859819529337839 0.876982685623298 0.9508268573396625 0.9642122949215581 0.9660613977597108 0.874879351854933 1.0 12.588845003285423 -7.807294753454737 1.4399457713972355 0.9835297982526627 0.8507974706898985 0.4493898514075718 0.0480778613480027 0.14877921026065064 0.6273933603179437 0.006112567636161343 0.009517176139367393 1.5584944015844515e-08 7.807294753454737 -0.1327323275627642 GLPSTAS(ph)GR ddPTM_A549_PD325901_60min_R1 2 GLPSTASGR 9 0 H7BYT1;P48730-2;P48730 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GLPSTAS(1)GR;GLPSTAS(1)GR 151.22 2.113e-05 199632000.0 11765.7 11472.1 11645.400000000001 12373.8 15277.5 12227.3 12687.2 12360.8 11308.5 11751.8 13127.599999999999 True False 12960.145202549451 12438.894128338454 12435.726873479032 13138.10152306125 14204.461104513783 12127.724922748388 13170.018338702226 12114.254147139987 10833.243071368059 11009.78934242526 11512.988422712808 1.125697753415759 1.0804227079564348 1.080147605199172 1.1411547584936699 1.233777068384021 1.0533950419704088 1.1439270027163784 1.0522249916660216 0.9409583918278118 0.9562929222359994 1.0 13.490974741518926 -8.533090929061528 3.882640028476757 0.9723645137033542 1.1211291115480662 0.6855892250409608 0.04648702191570328 0.09673919449761738 3.2738947178442475 0.008237682051745476 0.009603824401122727 2.9302796627938985e-09 8.533090929061528 0.14876459784471197 GLPSTAS(ph)GRLR ddPTM_A549_PD325901_60min_R1 1 GLPSTASGRLR 11 1 H7BYT1;P48730-2;P48730 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GLPST(0.012)AS(0.988)GRLR 80.318 0.00024681 6230000.0 1014.9 1107.1 1358.6 815.46 1292.9 2295.6 1489.9 1519.3 1403.3 1526.7 1606.1 True False 1117.931900870108 1200.399202367788 1450.8027659254817 865.8291121559693 1202.0911642628612 2276.905394703754 1546.5989598045624 1488.9963696322077 1344.3241811072025 1430.303901451748 1408.5598819067498 0.7936701273621236 0.8522173730681741 1.029990122934318 0.6146910211470081 0.8534185729012852 1.6164775271190714 1.0980001487128477 1.0571054796879293 0.9543961874644675 1.0154370572556444 1.0 10.460005182768619 -7.033770709699508 24.999674846824693 1.042377635048046 0.8263761050226317 0.3148345066498254 0.19798313712860172 771.4343879669483 571073.9702790454 0.03024521883622692 0.05240768198596813 9.251865068806878e-08 7.033770709699508 -0.21600153002541433 GLPSTSSKEDVT(ph)PPLSPDDLK ddPTM_A549_PD325901_60min_R1 2 GLPSTSSKEDVTPPLSPDDLK 21 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GLPSTSSKEDVT(0.998)PPLS(0.001)PDDLK;GLPS(0.002)T(0.002)S(0.002)S(0.002)KEDVT(0.987)PPLS(0.005)PDDLK 100.08 1.6428e-08 37908000.0 7659.1 7456.1 8528.5 7114.7 8269.2 8556.2 8324.9 8501.2 7750.3 7771.2 7356.700000000001 True False 8436.64619366859 8084.451714185223 9107.295296036706 7554.15886034394 7688.399919191317 8486.521143999067 8641.708625060079 8331.636896937613 7424.581843394251 7280.525105758709 6451.872537963632 1.3076275366610701 1.2530395891449018 1.4115739643720844 1.1708475044871574 1.1916540312834456 1.3153578428686101 1.339410934455257 1.2913517506604804 1.1507638750931726 1.1284359793097556 1.0 12.655502221812773 -9.370357781961724 0.8417211246582534 1.0260810819194943 1.2866029439640485 0.5559775652435317 0.0743449724887942 0.20594792248713073 0.3124247373209672 0.02160937357639034 0.015781711104748446 4.2622823732391154e-10 9.370357781961724 0.2605218620445542 GLPTGDS(ph)PLGPMTHR ddPTM_A549_MK2206_60min_R1 2 GLPTGDSPLGPMTHR 15 0 J3QQZ9;Q9NVS9-4;Q9NVS9-3;Q9NVS9 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 1 GLPTGDS(1)PLGPMTHR;GLPT(0.006)GDS(0.994)PLGPMTHR 90.385 7.8493e-06 18608000.0 2011.33 2279.7 1739.92 1659.8400000000001 3088.4 2406.4 2421.0 2384.6 3146.0 2895.8 3448.4 True False 2350.793331702725 2395.72699261402 1986.6668189809625 2066.5008745130503 2634.1004511787414 2661.0436507609606 2860.8643620684084 2722.6243525312225 2433.436023129671 2241.636768779554 2592.0671090016763 0.9069183909393932 0.9242534594471685 0.7664411203250516 0.7972404986493403 1.0162161473486133 1.0266106311521581 1.103699959053243 1.0503680028484408 0.9388013198728093 0.8648066097497418 1.0 11.339887354956613 -6.768319543544934 24.99966273921091 0.9936497479978206 0.8482324948805591 0.512991527812527 0.07076604035904144 98.88288877061835 359300.9151910406 0.009851953367530338 0.018914283552340438 1.7048275558755061e-07 6.768319543544934 -0.1454172531172615 GLPTGDS(ph)PLGPMTHR ddPTM_A549_PD325901_60min_R1 3 GLPTGDSPLGPMTHR 15 0 J3QQZ9;Q9NVS9-4;Q9NVS9-3;Q9NVS9 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 1 GLPT(0.002)GDS(0.997)PLGPMTHR;GLPT(0.011)GDS(0.988)PLGPMT(0.001)HR;GLPT(0.01)GDS(0.99)PLGPMTHR 74.732 0.00017359 26188500.0 4484.9 4729.7 4756.6 4942.8 5578.6 4552.799999999999 4093.26 4784.1 4558.1 4954.6 5530.5 True False 4940.203746391124 5128.288417883597 5079.411479759421 5248.1055300867265 5186.778381125226 4515.723506276027 4249.031249217817 4688.677372446156 4366.538908219728 4641.765710442672 4850.283560728022 1.0185391605536573 1.057317237987184 1.0472401079571123 1.0820203529088084 1.0693763191747692 0.9310225783166834 0.8760376988309612 0.9666810844647589 0.9002646656733437 0.9570091423161964 1.0 12.243853378291249 -7.261158497268846 24.999996542365885 0.9451813917367187 1.0561142935940546 0.7391109766722085 0.03430497273823849 13.568185697321194 1207619.1786537664 0.006557474817002615 0.010917771086805252 5.48076905860102e-08 7.261158497268846 0.11093290185733595 GLQDVLR ddPTM_A549_MK2206_60min_R1 1 GLQDVLR 7 0 P40227-2;P40227;Q92526-2;Q92526-3;Q92526 P40227-2 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 0 77.741 0.047337 1875400.0 699.15 677.85 604.14 646.92 1134.5 760.74 720.0 967.13 1267.3 853.15 968.12 False True 817.1494274236254 712.3496696685581 689.8161363850967 805.4154290413419 967.6165528630619 841.241001861657 850.8146801690424 1104.2236392114073 980.2585734622477 660.4228224615919 727.7090852472747 1.122906727412863 0.9788934673345496 0.9479284378464203 1.1067821542555878 1.3296749655588906 1.1560127788919994 1.1691686931185372 1.517397077482128 1.3470473206049873 0.9075368658303625 1.0 9.507218012243401 -6.524019153601288 24.794711697884786 1.2044934870978992 1.015232480509244 0.208690902137172 0.16094713916964767 42.0628663682994 914533.1176116278 0.024348127969230624 0.05101076370825139 2.992132672278959e-07 6.524019153601288 -0.18926100658865508 GLQLT(ph)PGIGGMQQHFFDDEDR ddPTM_A549_MK2206_60min_R1 7 GLQLTPGIGGMQQHFFDDEDR 21 0 P12270 P12270 TPR Nucleoprotein TPR 1 GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR 110.31 9.002200000000001e-11 44037400.0 8340.56 9058.170000000002 7659.91 7067.929999999999 9157.789999999999 7795.36 7286.070000000001 6403.329999999999 10747.26 8646.53 10711.46 True False 9748.242620885929 9519.192162427753 8746.200419203446 8799.573167291428 7810.691222251058 8620.259821058822 8609.854606582305 7311.021636875681 8313.02276984761 6693.272867724116 8051.508860743276 1.2107348808141307 1.1822867399228059 1.0862809158476214 1.0929098283919785 0.9700903715493164 1.070639052897104 1.0693467218997117 0.9080312477232699 1.0324801119426692 0.8313066511493878 1.0 12.975043455706647 -5.760164077129499 0.8362052482829727 1.0116138594813926 1.2643253149660525 0.5510231623923749 0.07103634943375935 0.5195936218507617 0.4054497834857819 0.00690623144055126 0.10262791762107329 1.7371444089043898e-06 5.760164077129499 0.2527114554846599 GLQLT(ph)PGIGGMQQHFFDDEDR ddPTM_A549_PD325901_60min_R1 3 GLQLTPGIGGMQQHFFDDEDR 21 0 P12270 P12270 TPR Nucleoprotein TPR 1 GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR 153.82 2.1274e-23 18534800.0 3358.54 4030.9 3332.8900000000003 3135.6800000000003 4023.89 4435.1900000000005 4142.83 4099.46 5693.0 6749.6 7927.1 True False 3699.4965083735287 4370.5980894447775 3559.0799576957006 3329.363831954025 3741.265848066895 4399.071283122556 4300.487662693563 4017.6930543358426 5453.743007940789 6323.429104106056 6952.11695402714 0.5321395673918472 0.628671542545473 0.5119418993137103 0.4788992840555466 0.5381477142584172 0.6327671574302722 0.6185867831527816 0.5779093017139939 0.7844722757118763 0.9095688616750175 1.0 12.763236637179146 -9.22772420082267 0.5579009279502786 0.9873596861078779 0.5349332917325315 0.8867839042417662 0.05456440862365016 0.1418798063424416 0.10128906768397428 0.02371288920405606 0.016225679958453827 5.919374253374793e-10 9.22772420082267 -0.4524263943753465 down GLQPST(ph)PPPKPPR ddPTM_A549_MK2206_60min_R1 2 GLQPSTPPPKPPR 13 1 A0A1B0GTL5 A0A1B0GTL5 1 GLQPS(0.051)T(0.949)PPPKPPR;GLQPS(0.068)T(0.932)PPPKPPR 70.529 0.0010815 80255000.0 5997.200000000001 5824.2 5250.799999999999 5106.6 7020.3 6614.700000000001 5939.0 5662.0 8476.5 9336.7 9317.7 True False 7009.380742537325 6120.626902830444 5995.442395687866 6357.717229243987 5987.623169735175 7314.663163517504 7018.039424338813 6464.6058391477745 6556.586284189018 7227.532985380228 7003.857934562385 1.0007885379781458 0.873893639764821 0.8560199895120336 0.9077450297599776 0.8549035725278876 1.044376289733315 1.0020248111696335 0.9230064201111892 0.9361392457482345 1.0319359777008126 1.0 12.773934105272367 -7.24649434530964 24.993325468134692 0.9725783394419817 0.8954283883836391 0.4171716621331667 0.05134021483479992 692.8239568635606 1158644.0742151826 0.007324622049898972 0.012652094722747734 5.668989527295083e-08 7.24649434530964 -0.07714995105834255 GLQPST(ph)PPPKPPR ddPTM_A549_PD325901_60min_R1 3 GLQPSTPPPKPPR 13 1 A0A1B0GTL5 A0A1B0GTL5 1 GLQPS(0.217)T(0.783)PPPKPPR;GLQPS(0.287)T(0.713)PPPKPPR;GLQPS(0.039)T(0.961)PPPKPPR 63.128 0.0026433000000000003 104890000.0 11687.1 11653.4 12013.5 12988.5 15444.599999999999 13326.599999999999 11363.900000000001 13463.8 13476.1 13845.0 15708.900000000001 True False 12873.565788411704 12635.472915610859 12828.808353044134 13790.770145976261 14359.824576977491 13218.072588020144 11796.359433064687 13195.253946853221 12909.746381400118 12970.824337197526 13776.804886921702 0.9344376939411082 0.9171555392793356 0.9311889410020244 1.0010136790909927 1.042318933514784 0.9594439854895557 0.8562478404744595 0.9577876768349571 0.9370638901662401 0.9414972806583556 1.0 13.749953716918402 -10.792215117904588 1.0355387706656713 1.0000374430274366 0.9487050962926326 0.0 0.04770417176098939 0.8824965537436471 1.6776465564669358 0.032921823877688695 0.008228571671278571 1.6135591190010663e-11 10.792215117904588 -0.051332346734804024 GLQT(ph)PVKDAGGGTGR ddPTM_A549_MK2206_60min_R1 1 GLQTPVKDAGGGTGR 15 1 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 GLQT(0.999)PVKDAGGGT(0.001)GR 76.027 0.00025324 88646000.0 3491.4 4041.5 3828.5 3798.4 5116.0 4134.3 4023.1 4105.6 7416.0 6168.2 6946.4 True False 4080.662963465418 4247.1950873577925 4371.438868723051 4729.008170516655 4363.443177124221 4571.788881873767 4754.045194150105 4687.581372872677 5736.28784091851 4774.7993359990505 5221.41716911299 0.7815240252405723 0.8134180721053749 0.8372131027151135 0.9056943770918834 0.8356817767666471 0.8755839140603314 0.9104894399689802 0.8977603629531481 1.0986074575406861 0.9144642500974863 1.0 12.350225713175037 -8.6302452672664 4.542969652247401 1.046328742388898 0.8548832705413907 0.5425410213827905 0.05765480337581743 0.07711795378548793 2.765217947998764 0.008775451693785338 0.009951996853877067 2.3429052887886035e-09 8.6302452672664 -0.19144547184750738 GLQT(ph)PVKDAGGGTGR ddPTM_A549_PD325901_60min_R1 2 GLQTPVKDAGGGTGR 15 1 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 GLQT(1)PVKDAGGGTGR;GLQT(1)PVKDAGGGTGR 145.88 4.8774e-14 263500000.0 16069.1 15428.2 16266.0 19373.5 17590.2 17235.2 16431.9 16909.2 17575.8 15680.6 16953.2 True False 17700.42320255382 16728.388559272615 17369.908575404002 20570.157094589154 16354.725034895651 17094.842245512344 17057.2249463807 16571.93274098921 16837.150247490892 14690.524239932063 14868.063875189284 1.1904995398957738 1.1251221880468043 1.1682697035213583 1.3835128277135733 1.099990232231057 1.149769222745871 1.1472391489280944 1.1145992430556622 1.1324373091769853 0.9880589943150914 1.0 13.85992917088576 -10.44453987755819 0.2735723655449785 0.9278271155292077 1.204471091835719 0.514421919338806 0.06900137413520989 2.4793742670994736 0.27937560409752143 0.22541596148876844 0.046069847136975574 3.593024035654299e-11 10.44453987755819 0.2766439763065114 GLRDSHS(ph)S(ph)EEDEASSQTDLSQTISK ddPTM_A549_MK2206_60min_R1 1 GLRDSHSSEEDEASSQTDLSQTISK 25 1 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 2 GLRDS(0.101)HS(0.819)S(0.789)EEDEAS(0.158)S(0.096)QT(0.037)DLS(0.001)QTISK 68.368 4.5301000000000006e-05 8497900.0 1094.3 1290.8 1188.1 1285.4 1457.2 733.4 1111.9 1134.1 1912.2 1580.2 1945.7 True False 1278.9910869336682 1356.4962065474308 1356.5904453258083 1600.3230577037991 1242.8478103411683 811.0079012084803 1313.9178373332754 1294.862148035587 1479.0897531559299 1223.2317225034365 1462.528991411833 0.8745064846195022 0.927500387693481 0.9275648231877043 1.0942162973186251 0.8497936229909546 0.5545243246259239 0.8983875499554387 0.8853582770934401 1.0113233733083884 0.8363811792357059 1.0 10.514249507889087 -8.742217017805784 6.4419801164521315 1.0054633504787693 0.8758802837475885 0.011094533203302226 0.13009782294843086 0.20797211820965866 31.415313781463976 0.02143589995987957 0.02387301586256583 1.810435188526928e-09 8.742217017805784 -0.1295830667311808 GLRDSHS(ph)S(ph)EEDEASSQTDLSQTISK ddPTM_A549_PD325901_60min_R1 1 GLRDSHSSEEDEASSQTDLSQTISK 25 1 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 2 GLRDS(0.073)HS(0.887)S(0.74)EEDEAS(0.131)S(0.145)QT(0.023)DLSQTISK 95.87799999999999 3.1346999999999995e-09 34782000.0 2873.6 3051.2 2724.6 3264.7 3088.4 3478.7 2939.6 3278.4 2973.4 3807.1 3416.5 True False 3165.325756567488 3308.3353321873306 2909.5077403507767 3466.3531043283424 2871.4814384015954 3450.37062055931 3051.4680866108433 3213.0097401449534 2848.4383382770297 3566.7190562762485 2996.2921589779016 1.0564142575626696 1.1041431064305403 0.9710360625658317 1.1568808782354483 0.9583449430315628 1.1515467909966108 1.0184147355148983 1.0723285880242661 0.950654404558697 1.1903775957191476 1.0 11.548962587950912 -8.755338658583085 24.99809674352954 0.9766979120886589 1.0609231598764992 0.0 0.08879399861260834 124.04103982704777 508265.31539958477 0.009292705623237503 0.010407873396359098 1.7565533366771804e-09 8.755338658583085 0.08422524778784035 GLRDSHS(ph)SEEDEAS(ph)SQTDLSQTISK ddPTM_A549_PD325901_60min_R1 1 GLRDSHSSEEDEASSQTDLSQTISK 25 1 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 2 GLRDS(0.017)HS(0.798)S(0.185)EEDEAS(0.889)S(0.109)QT(0.001)DLSQTISK 138.16 9.780200000000002e-25 34467000.0 2433.5 2634.1 3115.6 2686.9 2771.1 3097.7 3015.0 3853.3 3384.4 2818.6 3490.3 True False 2680.5471285519857 2856.0848513747524 3327.0433516247836 2852.8637106073543 2576.467495776021 3072.473358239161 3129.7374748713064 3776.442908644627 3242.1654375680314 2640.633114974715 3061.0152268346455 0.8757052578676334 0.9330515008016446 1.086908461760654 0.9319991895491033 0.8417035868326311 1.0037432454775352 1.0224508024116319 1.2337223531389603 1.059179780990737 0.8626657887309362 1.0 11.579794506143847 -7.53753695555929 4.5335487086217015 1.046276529865277 0.9403874512973637 0.18975000746235182 0.09885095644554755 0.21922553128791536 11.303160017462782 0.013280747694421963 0.020430432345797698 2.9004343806013507e-08 7.53753695555929 -0.1058890785679133 GLRYS(ph)LPTPK ddPTM_A549_MK2206_60min_R1 1 GLRYSLPTPK 10 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 GLRY(0.009)S(0.987)LPT(0.003)PK 44.61600000000001 0.015276 4262500.0 1903.4 1925.7 2164.3 1817.0 2344.6 1964.3 2010.3 1735.4 2696.0 2900.2 2348.4 True False 2224.64738633788 2023.7099046702706 2471.230284335196 2262.16508156823 1999.7124458728392 2172.1609222031884 2375.545488255316 1981.398264439605 2085.3603046273333 2245.042805723621 1765.227467457238 1.2602610300090242 1.146430101490189 1.3999500517034984 1.281514775445239 1.132835559574297 1.2305274885236899 1.3457446884605895 1.1224605899055917 1.1813550055570108 1.2718150193739868 1.0 10.785638386021343 -10.225650820823235 0.3665852552535516 0.9478143484635123 1.263327405622433 0.0 0.11266300575254837 1.0684578353804146 0.2369884654361146 0.13220117131628437 0.030766672823965453 5.94770170425659e-11 10.225650820823235 0.31551305715892075 GLRYS(ph)LPTPK ddPTM_A549_PD325901_60min_R1 1 GLRYSLPTPK 10 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 GLRY(0.051)S(0.941)LPT(0.008)PK 46.068999999999996 0.010951 10934000.0 2132.5 2160.6 2215.9 2551.2 2726.1 2845.5 2280.5 3005.9 2663.0 2349.0 2997.4 True False 2348.989830136473 2342.681344626359 2366.2842992891747 2708.7818298044135 2534.628140534449 2822.3271914225193 2367.2856754374843 2945.944966417066 2551.0833708319537 2200.6837391171525 2628.7388020841117 0.8935805369001101 0.8911807223939628 0.9001595355967438 1.0304492130054315 0.964199310530567 1.0736430676128519 0.9005404696581711 1.120668574634143 0.9704590539042558 0.8371633337524483 1.0 11.360155084032026 -6.24443914297403 21.02091243254007 0.9963538547403147 0.8945941367629449 0.23269749056956168 0.07315829409222137 72.12605891961886 89181.8563971365 0.0068700558928511055 0.018083297026818587 5.695880340418729e-07 6.24443914297403 -0.10175971797736982 GLS(ph)APDLR ddPTM_A549_MK2206_60min_R1 2 GLSAPDLR 8 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GLS(1)APDLR;GLS(1)APDLR 129.38 0.0010677 86460000.0 2868.65 3189.7799999999997 3247.8 2583.82 4164.3 3137.9 2738.02 3114.8 4982.0 4632.2 4935.8 True False 3352.807988241127 3352.1261773480487 3708.3868768025936 3216.856015992086 3551.736986414855 3469.9504952305556 3235.4827924950614 3556.332438674934 3853.5849546192035 3585.7828027973783 3710.1046388500395 0.9036963413733641 0.9035125700355051 0.9995370044204526 0.8670526384369478 0.9573145051552316 0.9352702505733314 0.87207319130975 0.9585531365975792 1.038672848810441 0.9664910162503677 1.0 11.857244161486918 -8.581644797688073 4.910263910139998 1.017962037424441 0.9217132069210646 0.43959673742747785 0.039407461413432855 0.09847182612691324 4.890097945134754 0.005974048092202042 0.006815688226867567 2.6203252529621626e-09 8.581644797688073 -0.09624883050337629 GLS(ph)APDLR ddPTM_A549_PD325901_60min_R1 2 GLSAPDLR 8 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GLS(1)APDLR;GLS(1)APDLR 111.06 0.001546 116035000.0 2711.2 2496.63 2592.53 2266.6 2718.0 2545.0 2532.85 2554.3999999999996 3099.1000000000004 2521.8999999999996 2671.8 True False 2986.4390281200504 2707.029772023747 2768.474675949351 2406.6027341779095 2527.0970565909643 2524.27436379206 2629.2389927787026 2503.4504881119665 2968.8556044105558 2362.666803609854 2343.1855379356525 1.2745209373181368 1.155277603159262 1.1815004109270741 1.0270645218722745 1.078487817408321 1.077283178358956 1.1220788751944344 1.0683961844171792 1.2670168692770778 1.0083140090098732 1.0 11.194255478752972 -11.160610858152646 1.5623541402397927 1.0002456599814895 1.151093200464403 0.30953394251184485 0.07595728329013691 0.40506435783937444 1.7786524810399522 0.06214894210586002 0.013293421508085584 6.908585581122676e-12 11.160610858152646 0.1508475404829135 GLS(ph)EDTTEETLK ddPTM_A549_MK2206_60min_R1 1 GLSEDTTEETLK 12 0 P19338;H7BY16 P19338 NCL Nucleolin 1 GLS(0.976)EDT(0.004)T(0.02)EETLK 83.182 0.00058678 991160.0 2222.9 2162.9 1836.5 1604.2 3333.2 2083.2 1847.4 2294.9 2689.4 2524.8 3172.2 True False 2598.071175312847 2272.9823715071557 2096.9433152435377 1997.2290720152755 2842.89069546334 2303.642841283756 2183.0486668670706 2620.209102836493 2080.255194089299 1954.4459264502457 2384.455191733881 1.0895869145788533 0.9532501929106638 0.8794224032864816 0.8376039436341725 1.1922600623063515 0.9661086730712011 0.9155335249892637 1.09887118530048 0.8724236887742144 0.8196614191894503 1.0 11.21944395677548 GLS(ph)EDTTEETLKESFDGSVR ddPTM_A549_PD325901_60min_R1 2 GLSEDTTEETLKESFDGSVR 20 1 P19338;H7BY16 P19338 NCL Nucleolin 1 GLS(0.754)EDT(0.196)T(0.05)EETLKESFDGSVR;GLS(0.816)EDT(0.092)T(0.092)EET(0.001)LKESFDGSVR 119.52 7.113e-15 18014900.0 6404.4 5229.2 5293.5 5477.9 6112.2 6018.799999999999 6413.799999999999 6629.799999999999 6478.5 6607.0 7434.700000000001 True False 7054.569973329909 5669.883035878998 5652.748742401392 5816.25744178645 5682.9001579452915 5969.784888326778 6657.880668766028 6497.563438022511 6206.2311745906145 6189.832892442329 6520.279032446369 1.0819429564631804 0.8695767478146856 0.8669489011546972 0.8920258493299827 0.8715731534901969 0.9155719960173163 1.0211036422881479 0.9965161622208467 0.9518352119145543 0.9493202455969038 1.0 12.670717989933292 -7.665567139171573 7.6981298438797845 0.9813620607358094 0.9082524182468882 0.23563619844321326 0.05958416183878335 0.24464813303181138 17.309967863232384 0.008723612918558157 0.012946235977058618 2.159896102729239e-08 7.665567139171573 -0.07310964248892127 GLS(ph)EGR ddPTM_A549_MK2206_60min_R1 2 GLSEGR 6 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5;A5PLN7;A5PLN7-4;A5PLN7-3 O75369-8 FLNB;FAM149A Filamin-B;Protein FAM149A 1 GLS(1)EGR;GLS(1)EGR 97.03299999999999 0.034752 734740000.0 11672.400000000001 11968.900000000001 11773.7 10683.5 14341.0 9851.0 10941.2 11013.3 14881.0 15429.0 15006.2 True False 13642.41575721881 12578.065886694707 13443.38769980008 13300.957979600536 12231.457897407821 10893.426281435426 12929.07441481324 12574.469001816695 11510.477260073936 11943.578184094124 11279.746389949238 1.2094612135406535 1.1151018340183898 1.1918164854999527 1.1791894533597218 1.0843734845232516 0.9657509934037134 1.1462203109755755 1.1147829540760874 1.0204553242730963 1.0588516595316708 1.0 13.461447010577317 -6.418029098564533 0.24785811029804233 0.986181288335093 1.279372685183823 0.4390884582618121 0.057808217686673415 3.042074196052625 0.2370064753023311 0.0415827812856981 0.2662838817911277 3.819186806975192e-07 6.418029098564533 0.29319139684872997 GLS(ph)EGR ddPTM_A549_PD325901_60min_R1 2 GLSEGR 6 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5;A5PLN7;A5PLN7-4;A5PLN7-3 O75369-8 FLNB;FAM149A Filamin-B;Protein FAM149A 1 GLS(1)EGR;GLS(1)EGR 99.375 0.033752 892750000.0 12994.900000000001 12042.099999999999 12911.8 12562.4 14300.5 14001.7 12961.7 14015.8 12206.8 13754.7 14286.0 True False 14314.13268166024 13056.930028753617 13788.072392960867 13338.350916719579 13296.082214046763 13887.674797448835 13454.964586414399 13736.24387381761 11693.790646290468 12886.225894608217 12528.912566415429 1.1424880336407015 1.0421439178810756 1.1005003283302255 1.0646056348476645 1.0612319420033134 1.108450132749402 1.0739131999756557 1.0963636150385878 0.9333444210981598 1.0285191014223045 1.0 13.612973582467765 -8.754483808523673 24.999999578112828 0.968523753036231 1.083997862361285 0.6087272870375118 0.03440381516697501 58.92321634371588 211783.98827434535 0.00547898885374327 0.0061474735721630475 1.7600142798742518e-09 8.754483808523673 0.11547410932505398 GLS(ph)GEEEDDEPDCCNDER ddPTM_A549_MK2206_60min_R1 2 GLSGEEEDDEPDCCNDER 18 0 Q6P158-2;Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 GLS(1)GEEEDDEPDCCNDER;GLS(1)GEEEDDEPDCCNDER 107.61 4.0454e-09 58657000.0 514.93 1046.16 496.08000000000004 263.48 620.26 913.5899999999999 704.8399999999999 762.79 832.72 956.4 1009.1700000000001 True False 601.8375951702029 1099.4050754893547 566.4316034990545 328.03261182806676 529.0205756534538 1010.2654874080392 832.9003044032618 870.917818446402 644.1102495805906 740.3485757513529 758.5652373249109 0.7933893692421106 1.4493217213148595 0.7467144230028022 0.4324382342972604 0.6973962813258501 1.3318109474285327 1.0979942968919778 1.1481119560892399 0.8491164871357049 0.9759853725464678 1.0 9.56712944871495 GLS(ph)GEEEDDEPDCCNDER ddPTM_A549_PD325901_60min_R1 2 GLSGEEEDDEPDCCNDER 18 0 Q6P158-2;Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 GLS(1)GEEEDDEPDCCNDER;GLS(1)GEEEDDEPDCCNDER 161.66 7.442599999999999e-23 35362000.0 577.63 1162.98 1074.8400000000001 970.15 966.66 604.9200000000001 998.78 1072.3600000000001 152.84 650.0699999999999 815.63 True False 636.2705723712687 1260.9884060786653 1147.7851059379834 1030.0739621294892 898.7651363959607 599.9937320805866 1036.7891194533865 1050.9709385498538 146.41666631541713 609.0244692583599 715.312680704565 0.8894999201531815 1.7628492267697862 1.6045921411702697 1.440033135040878 1.2564647050723323 0.8387852589018944 1.4494208580675172 1.4692468998517878 0.20468904056223414 0.8514101394910071 1.0 9.482430206901306 -8.746147335407935 24.999323940772616 0.6244364776799036 1.3494941393470619 0.45128284793046947 0.3188455257343113 161.6501944391907 264264.4401413577 0.06380240994803835 0.07221330142104915 1.7941248625648258e-09 8.746147335407935 0.7250576616671582 GLS(ph)GPCRPPPPPQAR ddPTM_A549_PD325901_60min_R1 1 GLSGPCRPPPPPQAR 15 1 Q9UEE5 Q9UEE5 STK17A Serine/threonine-protein kinase 17A 1 GLS(1)GPCRPPPPPQAR 49.924 0.0067705 23768000.0 2946.8 3689.4 3125.7 3765.0 3735.9 3268.0 3059.5 3311.7 4407.4 4294.9 4349.6 True False 3245.956966680495 4000.3186859504262 3337.828798361015 3997.555499064603 3473.50327215533 3241.3864915019462 3175.930946722638 3245.64554552161 4222.172305146361 4023.7192810277825 3814.626774386152 0.8509238671725186 1.0486789199958246 0.8750079616630743 1.0479545537473682 0.9105748681571303 0.8497257223869689 0.8325666269759004 0.8508422284756542 1.1068375898519696 1.054813358949193 1.0 11.897326194387015 -8.762666061282491 24.99999994229319 1.0504510855619336 0.912111095335393 0.426678775287445 0.0750418315269697 24.836256462133083 506165.2675998091 0.013760829406738626 0.015054532328085842 1.7271654375781222e-09 8.762666061282491 -0.13833999022654053 GLS(ph)LEHQK ddPTM_A549_PD325901_60min_R1 2 GLSLEHQK 8 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 GLS(1)LEHQK;GLS(1)LEHQK 94.69200000000001 0.00089188 8996400.0 1830.0 1599.2 1595.5 1586.8 1806.7 1734.5 2084.4 2229.2 1267.5 1756.9 1925.1 True False 2015.7802528252025 1733.9701963928887 1703.7802245209077 1684.8130321157269 1679.8036247766358 1720.3748070716415 2163.722982627445 2184.736857226429 1214.231382849982 1645.9690341655694 1688.3249042143589 1.1939528036300697 1.027035846041595 1.0091542334463999 0.9979199074242963 0.9949528201494556 1.018983255401422 1.281579734579765 1.294026316719571 0.7191929585466902 0.974912488737765 1.0 10.721376850196268 -8.769778516517475 24.999999291049058 0.8673966861005037 1.0927480239202763 0.33590202020566073 0.12534465579205611 156.65767528422305 469644.7060632869 0.025647839019395196 0.027522776566438232 1.6991099513932273e-09 8.769778516517475 0.22535133781977257 GLS(ph)PADVAQEHLK ddPTM_A549_MK2206_60min_R1 1 GLSPADVAQEHLK 13 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 GLS(1)PADVAQEHLK 54.393 0.0061371 3679300.0 1158.5 1280.8 1089.6 849.75 1467.6 927.54 1058.0 1078.3 1495.1 1434.9 1257.5 True False 1354.0264773943647 1345.9872492608838 1244.1216641924084 1057.9387881467264 1251.7179841179634 1025.6916671487782 1250.2249050261773 1231.1523271552537 1156.4622371840974 1110.755093418669 945.2280447655754 1.4324865675459035 1.4239815002470648 1.3162132366702695 1.1192418528050596 1.3242497311094912 1.085126147947883 1.3226701344184553 1.3024923815718883 1.223474317746158 1.1751186389038486 1.0 9.884518624253635 -14.999999999999885 0.08498079105503169 0.06575437790597673 1.5420481399593198 0.3778796976289084 0.10489267174038028 73.6715194927322 0.4599541595674397 12.75160805631738 1.1491612711502495 1.000000000000266e-15 14.999999999999885 1.476293762053343 GLS(ph)PADVAQEHLK ddPTM_A549_PD325901_60min_R1 2 GLSPADVAQEHLK 13 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 GLS(1)PADVAQEHLK;GLS(1)PADVAQEHLK 96.773 1.3074000000000003e-09 4023100.0 1010.7 548.33 681.16 887.56 864.38 665.95 777.6 697.85 954.23 716.05 888.15 True False 1113.3055199619855 594.5396934643027 727.3876137478294 942.3825654049882 803.6689307491165 660.5267239950191 807.1919935190472 683.930834297266 914.127031524212 670.8384807981421 778.9131804467212 1.429306305130803 0.7632939182301718 0.9338494096744634 1.2098685566785687 1.0317824257232333 0.8480107161830215 1.0363054750930105 0.8780578522307441 1.1735929683458985 0.8612493633929827 1.0 9.605318720732692 -8.780562525843159 24.99870309687109 1.0819744321903944 1.0071511021213848 0.0 0.18863857378704954 709.6322403265586 927661.2170222946 0.029502048020631687 0.031431368588904406 1.6574386964407812e-09 8.780562525843159 -0.07482333006900954 GLS(ph)PAQADSQFLENAK ddPTM_A549_PD325901_60min_R1 1 GLSPAQADSQFLENAK 16 0 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3 O43491 EPB41L2 Band 4.1-like protein 2 1 GLS(1)PAQADSQFLENAK 80.53399999999999 0.00028338 3842900.0 1323.7 1586.3 1727.7 2227.1 2584.2 2397.6 1839.2 1829.9 2101.5 2205.0 2190.4 True False 1458.0810495435637 1719.9830681203346 1844.9521115040889 2364.6629088889185 2402.694707006024 2378.0747405217458 1909.1917624488578 1793.4012089712207 2013.181263163105 2065.775923692346 1920.9946860896225 0.7590239890312419 0.8953606590247954 0.9604150000329642 1.2309575481972974 1.2507555197338678 1.2379392601874166 0.9938558270222024 0.9335794741951468 1.04798898078221 1.0753678490893905 1.0 10.907637812846811 -5.66789866939886 2.2587534931161235 1.0575142837387772 0.7769277437606756 0.4682681496795219 0.10823844710711696 0.2737674580598557 2.5394856672572175 0.016962597258374162 0.10883841536905292 2.1483316694124973e-06 5.66789866939886 -0.28058653997810157 GLS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 GLSPGR 6 0 Q96FF7;A0A044PY82 Q96FF7 LOC113230 Uncharacterized protein LOC113230 1 GLS(1)PGR;GLS(1)PGR 103.75 0.030093 68252000.0 7393.299999999999 7025.0 6876.0 6641.9 9385.2 6314.299999999999 7025.2 6580.3 10560.6 9738.8 10789.0 True False 8641.108291169405 7382.542493798955 7851.120193637121 8269.165798166223 8004.649512499265 6982.475034906881 8301.58790433828 7513.077676323573 8168.64096181284 7538.798316109651 8109.793538748142 1.0655152008349744 0.9103243453147823 0.9681035844038329 1.0196518269739678 0.9870349318084974 0.8609929465583808 1.0236497223602246 0.926420338622248 1.0072563404707566 0.9295918915925162 1.0 12.985449471063246 GLS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 GLSPGR 6 0 Q96FF7;A0A044PY82 Q96FF7 LOC113230 Uncharacterized protein LOC113230 1 GLS(1)PGR;GLS(1)PGR 78.149 0.023052 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLS(ph)PVKEPK ddPTM_A549_PD325901_60min_R1 2 GLSPVKEPK 9 1 F5H529;Q8TC05-4;Q8TC05 F5H529 MDM1 Nuclear protein MDM1 1 GLS(1)PVKEPK;GLS(1)PVKEPK 70.41199999999999 0.00099492 50498000.0 13449.2 12391.3 13349.900000000001 13120.3 14226.0 15013.5 14508.5 15094.599999999999 13884.599999999999 13785.3 15258.5 True False 14814.552883222244 13435.55833827114 14255.904493470183 13930.711132636736 13226.81483703572 14891.235033710058 15060.628906855838 14793.526361515384 13301.078546997123 12914.893805385978 13381.801231600857 1.1070671748013992 1.0040171801792523 1.0653202993185364 1.0410191342358037 0.9884181216053979 1.1127975058054742 1.1254560313816695 1.1054958974118347 0.9939677265259994 0.9651087758565502 1.0 13.707984699788804 -8.781730293172176 24.855992305109613 0.9971514133196632 1.066193409388519 0.41256086978017925 0.04316324227803059 182.15953240652001 223141.06129359573 0.007527822279641778 0.008018651490071001 1.652988022992274e-09 8.781730293172176 0.06904199606885586 GLS(ph)SPLAGEGR ddPTM_A549_MK2206_60min_R1 2 GLSSPLAGEGR 11 0 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 GLS(0.5)S(0.5)PLAGEGR;GLS(0.5)S(0.5)PLAGEGR 155.47 6.836599999999999e-24 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLSDHVS(ph)LDGQELGTR ddPTM_A549_MK2206_60min_R1 2 GLSDHVSLDGQELGTR 16 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 GLSDHVS(1)LDGQELGTR;GLSDHVS(1)LDGQELGTR 91.725 2.8622000000000003e-06 12905600.0 790.9000000000001 1007.17 781.72 828.5999999999999 1104.03 798.28 1042.62 798.56 1644.3000000000002 1153.74 1179.4299999999998 True False 924.3845843514925 1058.4306510291105 892.5796506355446 1031.6070371972673 941.6286494996974 882.7534597446222 1232.0505581081222 911.758325487433 1271.8686754075388 893.1093326927704 886.5449803879619 1.0426821027704332 1.1938826280037473 1.006806953263603 1.1636262795665762 1.0621329659862608 0.995723261958259 1.389721430230154 1.0284400066068136 1.4346352452990654 1.0074044210390045 1.0 9.792050020375726 -7.725942356609334 24.99995864948037 1.2069629444152297 1.082773292175754 0.07186979632601165 0.14586034458111344 319.2222202262815 224822.25793572087 0.026148169478519202 0.038783253553095365 1.879566272846478e-08 7.725942356609334 -0.12418965223947565 GLSDHVS(ph)LDGQELGTR ddPTM_A549_PD325901_60min_R1 2 GLSDHVSLDGQELGTR 16 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 GLSDHVS(1)LDGQELGTR;GLSDHVS(1)LDGQELGTR 150.61 1.5686e-41 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLSEDTTEETLKES(ph)FDGSVR ddPTM_A549_MK2206_60min_R1 1 GLSEDTTEETLKESFDGSVR 20 1 P19338;H7BY16 P19338 NCL Nucleolin 1 GLSEDT(0.001)T(0.001)EET(0.032)LKES(0.965)FDGS(0.001)VR 56.681000000000004 0.00046468 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLSEDTTEETLKES(ph)FDGSVR ddPTM_A549_PD325901_60min_R1 2 GLSEDTTEETLKESFDGSVR 20 1 P19338;H7BY16 P19338 NCL Nucleolin 1 GLSEDTTEET(0.077)LKES(0.661)FDGS(0.261)VR;GLSEDTTEET(0.01)LKES(0.989)FDGS(0.002)VR 82.84899999999999 3.5804e-05 16355400.0 8631.5 9002.3 9463.099999999999 9707.3 9938.2 10267.6 10605.900000000001 9899.7 8920.599999999999 10149.0 10688.2 True False 9507.763525825543 9760.955414574597 10105.322872243065 10306.89787412213 9240.17511692875 10183.984069811926 11009.513328271174 9702.242717335594 8545.69820422213 9508.190407960827 9373.619158082136 1.0143108404001826 1.0413219536616751 1.0780598936036396 1.0995643945311455 0.9857638721071437 1.0864516573655625 1.1745210833297548 1.0350583433902487 0.9116754222784745 1.0143563812023086 1.0 13.194390465236681 -8.583611014388357 6.730174242015946 0.9586732102319571 1.069215361553107 0.36581845416788383 0.05238721527633056 0.13830999857228454 12.134065566933312 0.009313408261338994 0.010576141340464622 2.608488855666579e-09 8.583611014388357 0.11054215132114997 GLSGS(ph)TSR ddPTM_A549_MK2206_60min_R1 2 GLSGSTSR 8 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 GLS(0.003)GS(0.924)T(0.073)S(0.001)R;GLS(0.001)GS(0.556)T(0.439)S(0.003)R 132.38 0.0010752000000000001 77975000.0 12278.7 12861.4 11928.599999999999 9686.3 13706.5 11114.4 9848.099999999999 11256.9 16049.4 15252.1 17102.300000000003 True False 14351.044374606978 13515.990324518985 13620.25484901391 12059.443934834524 11690.292006890764 12290.518430858385 11637.372294128827 12852.600047810422 12414.236525625338 11806.640016956506 12855.326910532249 1.1163500138490685 1.051392190847007 1.0595027994079997 0.9380892464861655 0.9093733740301086 0.9560642460822119 0.9052568149468402 0.9997878807174018 0.9656881238433905 0.9184239420067518 1.0 13.65007867787402 -6.1484664443338515 4.778045612424511 0.9693483303356331 1.0773535783319153 0.671287555684092 0.03769767024794772 0.11790880972091497 4.166076660214674 0.0053633332727581725 0.014777169859902637 7.104500606476351e-07 6.1484664443338515 0.1080052479962822 GLSHS(ph)PWAVK ddPTM_A549_MK2206_60min_R1 2 GLSHSPWAVK 10 0 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 GLS(0.007)HS(0.993)PWAVK;GLS(0.006)HS(0.994)PWAVK 111.52 4.8639e-05 70467000.0 11987.4 11133.6 10813.6 9853.7 17624.7 14281.6 11364.0 11709.7 19930.5 18571.5 20704.0 True False 14010.580056208211 11700.252684549485 12347.131082884578 12267.856942349406 15032.129977298913 15792.869432641175 13428.691702001392 13369.585834452266 15416.273572468494 14376.185251533081 15562.625398669159 0.9002709823887638 0.7518174077202959 0.7933835562179917 0.7882896765862201 0.9659122154661892 1.0147946781519077 0.862880867334232 0.8590829305443263 0.9905959423650215 0.9237634964061053 1.0 13.925797841553253 -7.1826749350730354 0.4019780132206696 1.0028294247386567 0.7741529978006749 0.31196937980653694 0.07288537170180279 0.9926941840541648 0.2773348786716689 0.023578508418647164 0.08889463135223942 6.566365680911812e-08 7.1826749350730354 -0.22867642693798174 GLSHS(ph)PWAVK ddPTM_A549_PD325901_60min_R1 4 GLSHSPWAVK 10 0 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 GLS(0.004)HS(0.996)PWAVK;GLS(0.003)HS(0.997)PWAVK;GLSHS(1)PWAVK;GLSHS(1)PWAVK 140.78 1.6207e-08 103260600.0 29868.7 25931.7 25921.6 24981.0 25812.8 26318.6 24268.38 23696.85 34097.7 29564.9 35318.8 True False 32900.94843582521 28117.055366309054 27680.795655243594 26524.01963403264 23999.797977325692 26104.270047504026 25191.926481067087 23224.19773693081 32664.692246945837 27698.16716842262 30974.811504319838 1.0621839758810718 0.9077393533900204 0.8936550155077828 0.8563093154040187 0.7748165948961017 0.842757995278307 0.8133036250294452 0.7497768867355947 1.0545566110189346 0.8942158425906725 1.0 14.918807882492874 -8.779986930026451 24.999668622483675 1.0257628621011619 0.8596736644618077 0.23446143295400856 0.08790418307669688 152.54910264932263 205615.3689764607 0.014060600783669906 0.01498155051969375 1.6596368530027877e-09 8.779986930026451 -0.16608919763935415 GLSHS(ph)PWAVKK ddPTM_A549_MK2206_60min_R1 4 GLSHSPWAVKK 11 1 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 GLSHS(1)PWAVKK;GLS(0.045)HS(0.955)PWAVKK;GLSHS(1)PWAVKK;GLSHS(1)PWAVKK 122.42 1.8753e-06 29529900.0 9992.2 10533.7 8975.2 8453.3 17675.300000000003 12125.8 10537.900000000001 9644.199999999999 18529.800000000003 17544.5 18914.800000000003 True False 11678.639074164847 11069.820336929552 10248.018319070949 10524.358879483054 15075.286784328335 13408.944107545396 12452.500025212992 11011.294884123794 14332.829886010231 13581.18526481556 14217.73313807705 0.821413579840505 0.7785924963862942 0.7207912977087284 0.7402276282213631 1.0603157787477835 0.943114065886804 0.875842857949238 0.7744761262000359 1.0080952952777638 0.9552285960722721 1.0 13.795403840909398 -6.984655870402872 0.33389826859031785 1.0158919063374494 0.7076060255228274 0.32137806347049913 0.09383288020116512 1.71058839504794 0.3003404421835254 0.0422484937076686 0.19026177669164487 1.0359627256371595e-07 6.984655870402872 -0.30828588081462205 GLSHS(ph)PWAVKK ddPTM_A549_PD325901_60min_R1 4 GLSHSPWAVKK 11 1 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 GLS(0.001)HS(0.999)PWAVKK;GLS(0.027)HS(0.973)PWAVKK;GLS(0.001)HS(0.999)PWAVKK;GLS(0.019)HS(0.981)PWAVKK 128.54 2.4496000000000003e-08 43634600.0 17389.9 15850.599999999999 15206.900000000001 15252.4 14967.7 17210.0 14598.5 14977.400000000001 23421.3 17853.2 23027.199999999997 True False 19155.309846232238 17186.38568968554 16238.931680518326 16194.50610728631 13916.420387761802 17069.84746595732 15154.053906105728 14678.664007456997 22436.984210764716 16725.945905153836 20195.000381447655 0.9485174292855899 0.8510218056481935 0.8041065300219745 0.8019066997475058 0.6891022592178936 0.8452511583826812 0.7503864134623713 0.7268464337807937 1.1110167757845988 0.8282221138514708 1.0 14.301710552840394 -8.763412698649908 24.999998132511603 1.0524245976867233 0.7997730282342432 0.3388032713166652 0.09690505121431522 20.441664638833323 258975.01668458982 0.012988624072302446 0.014171288363317361 1.7241986525153351e-09 8.763412698649908 -0.25265156945248 GLSLVDKENT(ph)PPALSGTR ddPTM_A549_MK2206_60min_R1 2 GLSLVDKENTPPALSGTR 18 1 A0A286YFD6;P31350;P31350-2 A0A286YFD6 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 GLSLVDKENT(1)PPALSGTR;GLSLVDKENT(1)PPALSGTR 219.3 1.5142999999999997e-56 220530000.0 31449.0 37394.0 35346.0 32744.0 51543.0 38170.0 37263.0 38882.0 54509.0 52654.0 55088.0 True False 36756.822345770735 39297.19487731222 40358.594293818736 40766.28146993404 43961.09297859922 42209.12406480461 44033.20475991534 44393.642571131 42162.79853298639 40759.42483020883 41408.12924854554 0.8876716483650808 0.9490212571893122 0.9746538910650335 0.9844994741308182 1.0616536843461324 1.0193439025330322 1.063395172856354 1.0720996909728862 1.0182251480116637 0.9843338873281869 1.0 15.337626405130662 -5.5727713425272585 1.078172770027051 1.0211046381561346 0.8642000352039563 0.7004012715565691 0.028608202375331477 0.5101495352629394 0.657646884717824 0.004527629008671154 0.07994107462823873 2.6744141258780344e-06 5.5727713425272585 -0.15690460295217834 GLSLVDKENT(ph)PPALSGTR ddPTM_A549_PD325901_60min_R1 4 GLSLVDKENTPPALSGTR 18 1 A0A286YFD6;P31350;P31350-2 A0A286YFD6 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 GLSLVDKENT(0.993)PPALS(0.003)GT(0.004)R;GLSLVDKENT(0.908)PPALS(0.046)GT(0.046)R;GLSLVDKENT(1)PPALSGTR;GLSLVDKENT(1)PPALSGTR 184.57 4.171299999999999e-40 417917000.0 48163.7 45812.5 47646.9 48152.9 63165.2 50817.2 52945.6 55849.3 54104.1 52616.2 56877.9 True False 53053.24336775806 49673.28015398276 50880.50515808538 51127.19526982949 58728.69426011021 50403.36157158898 54960.473780944 54735.34189857175 51830.29282907589 49294.00415246311 49882.278878714846 1.0635689579610665 0.9958101608541132 1.0200116414448035 1.0249570873484264 1.177345854685284 1.01044624873978 1.1018035866921079 1.0972903229152136 1.0390522244402165 0.9882067391571647 1.0 15.606239755942362 -9.67042948337863 1.174676746913395 1.0078335955726525 1.0592597546760416 0.1934247954687317 0.04970715998006626 0.5541218286175585 1.5665499423611613 0.013677348062505324 0.009504967782154098 2.1358488567860313e-10 9.67042948337863 0.0514261591033891 GLSNGEET(ph)PRR ddPTM_A549_MK2206_60min_R1 2 GLSNGEETPRR 11 1 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H0Y5I9;H0Y463;H0Y500;H7BZR9 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 GLS(0.002)NGEET(0.998)PRR;GLSNGEET(1)PRR 100.22 0.00016741 14572900.0 2072.27 2135.99 2058.5699999999997 1881.43 2307.9 1952.7400000000002 1761.7400000000002 2267.2400000000002 2679.6 3028.2 2928.4 True False 2422.0185138627708 2244.702767449058 2350.5061804851002 2342.380434460603 1968.4109672566442 2159.3776506760964 2081.82535366807 2588.628213131296 2072.6748784419146 2344.127516823761 2201.197460271578 1.1003186027499543 1.019764381870635 1.06783067984964 1.0641391682196497 0.8942455198970594 0.9810013366132441 0.9457694692284533 1.1760090858963272 0.9416124249871674 1.0649328645575253 1.0 11.104072853870077 -6.646634151476528 21.585822225318033 0.9814958571082387 1.0602896140863438 0.11131557540128822 0.0731977907157359 3.6753335361832837 676.1215001925681 0.009647992423684462 0.02008391462602144 2.2561389773717862e-07 6.646634151476528 0.07879375697810509 GLSNGEET(ph)PRR ddPTM_A549_PD325901_60min_R1 1 GLSNGEETPRR 11 1 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H0Y5I9;H0Y463;H0Y500;H7BZR9 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 GLS(0.005)NGEET(0.995)PRR 59.294 0.0060192 7009100.0 2067.0 2198.5 2607.5 2529.6 2571.0 2850.9 2189.6 2161.8 2803.8 2722.7 2896.4 True False 2276.840318355024 2383.7753106364207 2784.460630171273 2685.847646861573 2390.421829468496 2827.6832156128835 2272.9264261950934 2118.6812031007066 2685.9660364771435 2550.78825734111 2540.1611617923613 0.8963369539704577 0.9384346735521327 1.0961747908178123 1.0573532448493992 0.9410512472294443 1.1131904771025016 0.8947961493086114 0.8340735363443418 1.0573998519770693 1.004183630435972 1.0 11.310704317070037 -5.538303933218327 23.65443722856419 1.0115837214735681 0.9068613245953315 0.1286125758767922 0.0809586246597057 132.92418110920832 203839.13289429733 0.011105619709957075 0.04305160841508404 2.895316643003547e-06 5.538303933218327 -0.10472239687823659 GLSQNQQIPQNSVT(ph)PR ddPTM_A549_MK2206_60min_R1 2 GLSQNQQIPQNSVTPR 16 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GLSQNQQIPQNSVT(1)PR;GLSQNQQIPQNSVT(1)PR 205.12 8.5668e-40 12562400.0 2567.1 2973.0 3197.0 2999.5 4965.8 3375.6000000000004 2926.5 2736.2 5854.8 4737.5 5086.9 True False 3000.3637204307934 3124.313001290291 3650.3826729287184 3734.3776346526715 4235.337398155482 3732.8037514580687 3458.207168770423 3124.064729261062 4528.697148194403 3667.295459663353 3823.6823387021877 0.7846791272543732 0.8170953349515764 0.9546772847683028 0.976644319234995 1.107659324961868 0.9762327047086855 0.904418009249217 0.8170304048639705 1.1843811140785057 0.9591004520809868 1.0 11.900746957715269 -3.823579345333573 0.36589617669818325 1.0644426227359332 7.666287284818157e-11 0.19950674122581125 0.10393911832078591 12.087575325561318 0.490513493436166 0.030088147072488008 7.129735962527749 0.00015011381236913987 3.823579345333573 -1.0644426226592703 GLSQNQQIPQNSVT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GLSQNQQIPQNSVTPR 16 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GLSQNQQIPQNS(0.053)VT(0.947)PR;GLSQNQQIPQNSVT(1)PR 178.0 1.7737e-59 7993400.0 3008.4 2876.4 2745.4 3166.2 3007.1 3098.1 3055.8 3047.5 3581.5 2937.2 3391.8 True False 3313.8105533329735 3118.8043227266785 2931.719353431337 3361.768983038075 2795.8916699318215 3072.8701007717796 3172.0901411979235 2986.715221782499 3430.982010001746 2751.7446907343133 2974.6301023917026 1.1140244128735732 1.0484679490801412 0.9855744252282447 1.1301468980412388 0.9399123836216915 1.0330259544879508 1.0663813758381104 1.0040627301462053 1.1534146740608593 0.9250712176017509 1.0 11.538494563965486 GLSQSALPYR ddPTM_A549_MK2206_60min_R1 1 GLSQSALPYR 10 0 P62277;J3KMX5;E9PS50 P62277 RPS13 40S ribosomal protein S13 0 90.15 0.0018500999999999997 3301300.0 1902.3 2549.2 2304.1 2164.2 2729.6 2246.2 2222.0 2263.2 3121.6 2967.7 2935.3 False True 2223.361733230298 2678.9433914864485 2630.8560264920416 2694.429097154631 2328.0794558792545 2483.8913930931126 2625.7086379661296 2584.015530759315 2414.562584170875 2297.2945088428355 2206.383999841267 1.0076948225649989 1.2141782172455833 1.192383568173678 1.2211968076946151 1.0551560635169321 1.125774748761689 1.1900506159195454 1.171154037984873 1.0943528344769475 1.0412033938825287 1.0 11.107468184591921 -9.682979887117169 0.7131386841574736 1.0082657715217307 1.1519372942138606 0.344207400271186 0.06459427049570925 0.4127636483297103 0.44749340202844945 0.026195422678979303 0.014196827250756388 2.0750096122950828e-10 9.682979887117169 0.1436715226921299 GLSQSALPYR ddPTM_A549_PD325901_60min_R1 2 GLSQSALPYR 10 0 P62277;J3KMX5;E9PS50 P62277 RPS13 40S ribosomal protein S13 0 ; 114.4 0.00026593 13210100.0 6486.200000000001 7116.2 6783.2 7679.4 9562.5 8116.8 7514.1 8734.8 10464.3 14304.099999999999 13194.8 False True 7144.674249111932 7715.907148306071 7243.548742695221 8153.739096817188 8890.862988834104 8050.699471916459 7800.05318737329 8560.577561681956 10024.52186158349 13400.936684847014 11571.923248728708 0.6174145900852606 0.6667782858958852 0.6259589341375037 0.7046139973070559 0.7683133389094033 0.695709719021936 0.674049854956496 0.7397713740127356 0.8662796707267121 1.158056132658782 1.0 13.498341039225341 -9.02278559376344 0.5000500758102934 0.998288993170877 0.6535325148584697 0.8346158902772557 0.06570704845236593 0.17247993462373176 0.1027339073417201 0.020357234806057462 0.01585472226763881 9.488868022854918e-10 9.02278559376344 -0.3447564783124073 GLSS(ph)PLAGEGR ddPTM_A549_PD325901_60min_R1 2 GLSSPLAGEGR 11 0 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 GLS(0.1)S(0.9)PLAGEGR;GLS(0.046)S(0.954)PLAGEGR 151.79 1.0872e-23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLT(ph)LAQGGVK ddPTM_A549_MK2206_60min_R1 1 GLTLAQGGVK 10 0 A0A0U1RR79;A0A1B0GVU9 A0A0U1RR79 1 GLT(1)LAQGGVK 45.879 0.043767 136230000.0 8582.0 8646.5 7564.9 7220.5 9858.3 8151.8 7264.2 7959.0 9465.7 10930.0 10501.0 True False 10030.431790244662 9086.569917812485 8637.716572548785 8989.522824140558 8408.15712921104 9014.418065273105 8584.011110672172 9087.21262341525 7321.734063616818 8460.905408785324 7893.311887143784 1.2707507233537432 1.1511733031368263 1.0943082822582304 1.1388784521212478 1.0652255034931293 1.1420324186043276 1.0875043623517986 1.151254727209757 0.927587072232896 1.0719081584202959 1.0 12.946415039986878 -8.757317453009081 24.999677902930173 0.9658050025834812 1.1327502002609005 0.4745509208457228 0.06166039425445115 45.04504828219235 273200.23010009807 0.00933601984714746 0.01040045583684048 1.7485680835614187e-09 8.757317453009081 0.16694519767741922 GLT(ph)LAQGGVK ddPTM_A549_PD325901_60min_R1 1 GLTLAQGGVK 10 0 A0A0U1RR79;A0A1B0GVU9 A0A0U1RR79 1 GLT(1)LAQGGVK 46.88 0.030519 1554200000.0 6695.0 6806.9 8014.5 6470.6 7382.5 6464.9 7310.3 7007.6 7104.7 6663.8 6564.5 True False 7374.671471401494 7380.541351817627 8558.412165103618 6870.274266201173 6863.978668242384 6412.251997830764 7588.4974668496525 6867.827920644145 6806.114166259773 6243.046530748777 5757.10811579407 1.280968035178946 1.2819876235379053 1.4865818033926514 1.193355088703865 1.1922615539235266 1.1137973907836418 1.318109251071965 1.192930162593772 1.1822105872196245 1.084406685645104 1.0 12.491128590308119 -14.999999999759396 0.08614950929811593 0.12684833764806372 1.4860705013795361 0.5094798382975363 0.0868529054047997 67.84230316193111 0.42872188418780227 10.950340688836155 0.9568116145154274 1.0000000005540112e-15 14.999999999759396 1.3592221637314723 GLTLAPGLS(ph)PARPLFGSDFEKEK ddPTM_A549_MK2206_60min_R1 2 GLTLAPGLSPARPLFGSDFEKEK 23 2 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 GLTLAPGLS(1)PARPLFGSDFEKEK;GLTLAPGLS(1)PARPLFGSDFEKEK 233.22 4.504499999999999e-89 69987000.0 17179.4 19918.4 19118.2 17717.5 25582.0 18360.0 21094.0 17162.6 27860.0 28548.0 29522.0 True False 20078.862723995484 20932.161481634907 21829.4482382189 22058.288295368802 21818.921688270475 20302.843013618363 24926.506754841383 19595.45110825814 21549.754483278 22098.986972552928 22190.872634249954 0.9048252880783634 0.943277978592319 0.9837129254902207 0.9940252760192712 0.9832385615423974 0.9149186401206432 1.1232774467989681 0.8830410336371373 0.9711089256588118 0.995859303813262 1.0 14.437678780764013 -5.506294468603863 2.343880477254181 0.9838643859596768 0.902425199199516 0.15486926427425962 0.056462513809771325 0.4805476584817285 4.33280403215257 0.007034402278943895 0.06377263154458265 3.116775572036626e-06 5.506294468603863 -0.08143918676016082 GLTLAPGLS(ph)PARPLFGSDFEKEK ddPTM_A549_PD325901_60min_R1 2 GLTLAPGLSPARPLFGSDFEKEK 23 2 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 GLTLAPGLS(1)PARPLFGSDFEKEK;GLTLAPGLS(1)PARPLFGSDFEKEK 210.79 5.279099999999999e-74 156352000.0 26369.0 24982.0 26669.0 26843.0 32279.0 32102.0 34254.0 31458.0 31406.0 29464.0 31174.0 True False 29045.9614681682 27087.320814336617 28478.918713724903 28501.031145123823 30011.834396504695 31840.571955384163 35557.55471450802 30830.54551167642 30086.115037306932 27603.638011642306 27339.79562826786 1.0624059471072365 0.9907652998813862 1.0416653840776795 1.042474184249399 1.0977344090119712 1.1646236273420691 1.300578658230475 1.1276801747486114 1.1004513510773843 1.0096504885026152 1.0 14.73871483803159 -6.639778340428593 4.511297841874337 1.085960466098937 1.0296473039789196 0.13212154018807987 0.07994966493355357 0.5067029689756796 17.69864999783638 0.01366978456488009 0.029147000323380644 2.2920371871999447e-07 6.639778340428593 -0.05631316212001747 GLTLAQGGVK ddPTM_A549_MK2206_60min_R1 2 GLTLAQGGVK 10 0 A0A0U1RR79;A0A1B0GVU9 A0A0U1RR79 0 ; 67.113 0.005097399999999999 75253000.0 4286.700000000001 4470.4 3468.0 3353.4 4882.299999999999 4108.5 3581.8 3497.0 5733.2 6460.1 5523.2 False True 5010.190160247242 4697.924265377773 3959.8145479251757 4174.983150539844 4164.120137543699 4543.2587429984205 4232.566696429831 3992.710459113345 4434.639354039104 5000.758923265697 4151.637007434768 1.206798704047337 1.1315835794325737 0.9537959462337204 1.0056233584639669 1.003006797098729 1.0943294740995744 1.0194934405031397 0.961719546280945 1.068166447619947 1.2045270129132963 1.0 12.019464593852337 -5.568199260334963 5.301601587688706 1.0238762790879246 1.1907607518906644 0.3831220281430835 0.06747290300577537 0.07274181462652442 4.642886198292386 0.005815577720117884 0.024791355731032787 2.7027180350506503e-06 5.568199260334963 0.16688447280273988 GLTLAQGGVK ddPTM_A549_PD325901_60min_R1 2 GLTLAQGGVK 10 0 A0A0U1RR79;A0A1B0GVU9 A0A0U1RR79 0 ; 51.276 0.027407 132255000.0 2543.85 2112.7 2143.38 2143.04 2614.4 1964.83 2271.34 2848.6000000000004 2476.3 2193.5 2996.1000000000004 False True 2802.0997793166084 2290.7446435212933 2288.8426559909885 2275.4107136030293 2430.773563190368 1948.8290759173094 2357.777086624938 2791.7824383165303 2372.229722565216 2055.0020356549476 2627.5986938427322 1.0664108586607177 0.8718015612084178 0.8710777111263022 0.8659658413345284 0.9250931540217363 0.7416768323427821 0.8973124747511602 1.0624843302207947 0.9028127956236529 0.7820836722405313 1.0 11.359529238171488 -10.78121764333249 0.40782435883523166 1.0282894320691376 0.8978690266058204 0.0 0.1073931044610366 3.646193999761443 0.7457069917327404 0.20366905274991928 0.02598926767026305 1.6549403949966735e-11 10.78121764333249 -0.13042040546331723 GLTSVINQK ddPTM_A549_MK2206_60min_R1 2 GLTSVINQK 9 0 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ; 182.53 1.4997999999999998e-10 18043900.0 9619.4 10718.3 11102.900000000001 10331.3 13527.4 11871.599999999999 10180.7 9644.7 16061.0 15060.3 15953.0 False True 11242.919548249767 11263.815688439194 12677.458173056073 12862.468963789683 11537.537379638421 13127.844832269693 12030.401408884685 11011.86576065499 12423.209144146733 11658.167770167398 11991.429819598576 0.9375795645215338 0.9393221540628806 1.0572098877096596 1.0726384724169837 0.9621485972241341 1.0947689332938246 1.0032499534978234 0.9183113211951919 1.0360073261524214 0.9722083142340123 1.0 13.549716070883646 -5.740592796258973 24.107102472289338 1.017070507613415 0.9384507052584639 0.2530171732128179 0.048953556409706625 145.94107604785776 168762.72367173145 0.006172454334955277 0.023842283564390054 1.8172187271534159e-06 5.740592796258973 -0.07861980235495114 GLTSVINQK ddPTM_A549_PD325901_60min_R1 2 GLTSVINQK 9 0 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ; 148.05 7.4965e-05 37965000.0 17419.5 17691.199999999997 18571.6 18168.7 22789.0 21020.1 19881.8 20326.0 22106.0 20368.0 21441.0 False True 19187.914816441873 19182.099511271797 19831.980456103087 19290.939334888462 21188.379257782 20848.919274791937 20638.41277873841 19920.58198456147 21176.96169568576 19081.961003975364 18803.892925697408 1.0204224674253308 1.0201132067210152 1.0546741855246737 1.025901360485065 1.1268081211431464 1.108755477239492 1.0975606413145411 1.0593860570934222 1.1262009297418045 1.0147877931116034 1.0 14.198743750132836 GLVAAYSGDS(ph)DNEEELVER ddPTM_A549_MK2206_60min_R1 4 GLVAAYSGDSDNEEELVER 19 0 P52756 P52756 RBM5 RNA-binding protein 5 1 GLVAAYS(0.004)GDS(0.996)DNEEELVER;GLVAAYSGDS(1)DNEEELVER;GLVAAYSGDS(1)DNEEELVER;GLVAAYS(0.018)GDS(0.982)DNEEELVER 186.75 1.5539999999999999e-43 48186900.0 5359.200000000001 5726.73 5596.34 4297.17 8298.9 5711.5 5892.4 5862.46 8576.2 7233.8 8731.0 True False 6263.701940139735 6018.196096158475 6389.985163533905 5349.976842907295 7078.142803486355 6315.88713901314 6962.972807538981 6693.48165803078 6633.704393377206 5599.679555907706 6562.851736658635 0.9544177122198395 0.9170093029135742 0.9736598387315173 0.8151908739646685 1.0785163352006595 0.9623693163345431 1.06096756211105 1.01990444499035 1.0107960166649512 0.8532387718938 1.0 12.680107125777274 -6.776337208715797 24.99999930694521 1.0115931208028859 0.9193929893265987 0.24507637519177317 0.06718710251289316 140.89664219722647 236438.15423684247 0.006096309969759092 0.011553921792895484 1.673642868440627e-07 6.776337208715797 -0.09220013147628714 GLVAAYSGDS(ph)DNEEELVER ddPTM_A549_PD325901_60min_R1 2 GLVAAYSGDSDNEEELVER 19 0 P52756 P52756 RBM5 RNA-binding protein 5 1 GLVAAYS(0.001)GDS(0.999)DNEEELVER;GLVAAYSGDS(1)DNEEELVER 273.43 1.3602999999999997e-111 157428000.0 7797.8 8248.8 8585.4 7916.6 9324.1 7306.5 9007.1 7350.9 8001.6 9637.3 10239.900000000001 True False 8589.426915563039 8943.955325166115 9168.056872204197 8405.59040209691 8669.207382398754 7246.998286462357 9349.870119374242 7204.280532830507 7665.320578313541 9028.799233288091 8980.457216074292 0.9564576400618734 0.9959354084062845 1.0208897667029821 0.9359869102267514 0.9653414268130551 0.8069743123424514 1.041135199958275 0.8022175663768463 0.8535557148018296 1.005383024054418 1.0 13.132573182476085 -6.565286088415112 2.3444346506700153 0.9200371392617777 0.9904658922855568 0.12078601572716985 0.07621907900177619 0.48779150788554054 5.370643287857811 0.011523909964569519 0.028498230751624228 2.720908338486021e-07 6.565286088415112 0.07042875302377916 GLVAAYSGDS(ph)DNEEELVERLESEEEK ddPTM_A549_PD325901_60min_R1 2 GLVAAYSGDSDNEEELVERLESEEEK 26 1 P52756 P52756 RBM5 RNA-binding protein 5 1 GLVAAYSGDS(1)DNEEELVERLESEEEK;GLVAAYS(0.136)GDS(0.864)DNEEELVERLESEEEK 208.86 3.326899999999999e-81 120637000.0 3954.4 4218.0 3930.7999999999997 4144.9 5256.6 4650.6 4455.799999999999 4238.2 5032.9 4964.7 5246.3 True False 4355.847776924584 4573.46566307229 4197.567725820612 4400.921059249107 4887.394550285531 4612.727055501516 4625.367907307316 4153.665776196419 4821.384715381202 4651.227994718998 4601.03835903579 0.9467097287659673 0.9940072883962485 0.9123087873364895 0.9565060570743383 1.0622372970847718 1.0025404475150204 1.005287838607941 0.9027670391052501 1.0478905714647397 1.0109083280265732 1.0 12.167743768958063 -6.636065865792692 9.884727137304388 1.013271510999166 0.951866818477781 0.24679642488299525 0.04214352326024111 0.2884794192483248 23.883847726051407 0.006201532239340562 0.012917547056262756 2.3117141653366382e-07 6.636065865792692 -0.06140469252138492 GLVAAYSGES(ph)DS(ph)EEEQER ddPTM_A549_PD325901_60min_R1 2 GLVAAYSGESDSEEEQER 18 0 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 2 GLVAAYS(0.061)GES(0.939)DS(1)EEEQER;GLVAAYS(0.001)GES(0.999)DS(1)EEEQER 130.06 1.9604e-12 8172300.0 3214.8 3292.3 2836.1000000000004 3802.6000000000004 4281.799999999999 3617.0 2839.8 3474.6000000000004 3707.8999999999996 3483.1000000000004 3900.1 True False 3541.1641293893244 3569.7536753278555 3028.5748008547453 4037.4779656688115 3981.0611394080897 3587.5443512125285 2947.870142998187 3405.2963772290304 3552.069857569586 3263.1764715704353 3420.4124247708833 1.0353032586783828 1.0436617670651152 0.8854414102000038 1.180406765110866 1.1639126061456644 1.0488630918398212 0.8618464023956557 0.9955806359980506 1.038491683589157 0.9540301186892746 1.0 11.739954576819533 -7.543769204822051 24.998158658653814 1.003726563962948 1.0624232108596297 0.16873527525937337 0.08555637782816858 457.3586818081249 547287.0415499937 0.013279431796837025 0.019697754250329432 2.85910954354392e-08 7.543769204822051 0.05869664689668164 GLVAAYSGES(ph)DSEEEQER ddPTM_A549_MK2206_60min_R1 2 GLVAAYSGESDSEEEQER 18 0 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 GLVAAYS(0.012)GES(0.961)DS(0.027)EEEQER;GLVAAYSGES(0.998)DS(0.002)EEEQER 195.15 1.8347999999999998e-48 12658400.0 1455.37 1688.6599999999999 1628.37 1383.04 2820.5 1518.13 1790.17 2118.5 3247.5 2520.2 3375.5 True False 1701.000875619712 1774.6055811499716 1859.2973516161826 1721.8848620870253 2405.6081862937576 1678.7775089468653 2115.4207166641895 2418.80386263415 2511.9464351918646 1950.8850696450827 2537.2701909393213 0.6704058880658608 0.6994152958116754 0.7327943859726871 0.6786367759476051 0.9481087961716756 0.661647117812615 0.8337388442974774 0.9533095337153218 0.9900192908749377 0.7688913370802054 1.0 11.30906144315447 -8.174594715250523 2.2047114947462183 0.9950102861550358 0.736714148484902 0.4001614654902136 0.10104813450956082 0.11629873044779335 1.108179989417414 0.011927967050371559 0.015730318182160252 6.689679089751886e-09 8.174594715250523 -0.2582961376701338 GLVAAYSGES(ph)DSEEEQER ddPTM_A549_PD325901_60min_R1 2 GLVAAYSGESDSEEEQER 18 0 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 GLVAAYSGES(0.996)DS(0.004)EEEQER;GLVAAYSGES(0.999)DS(0.001)EEEQER 270.51 1.2824999999999998e-100 15811500.0 5009.6 6394.5 5334.7 6095.299999999999 6958.5 5642.0 5680.9 6540.8 6298.6 5808.6 8018.5 True False 5518.170904127394 6933.3869564997 5696.744822157125 6471.792837569315 6469.758965521793 5596.053422599138 5897.089758207761 6410.338612841667 6033.891745971516 5441.844004698125 7032.275333459477 0.7846921007020312 0.9859379258816464 0.8100855771462879 0.9202985563970465 0.9200093367702429 0.7957671105357872 0.8385749246974848 0.9115596743405874 0.8580283705989632 0.7738383022072387 1.0 12.779775841838553 -10.739559777377512 0.7698197149667925 1.0089791908099517 0.870884741045449 0.0 0.08894822128969035 0.5953535646522795 0.5595845344500137 0.05164419166085326 0.010305011279306126 1.8215463336478288e-11 10.739559777377512 -0.1380944497645027 GLVEDTLR ddPTM_A549_MK2206_60min_R1 2 GLVEDTLR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 77.282 0.012453 2328000.0 1430.02 1750.68 1343.1 1522.56 2063.2 1558.63 1552.79 1615.04 2030.5 1971.11 2294.9 False True 1671.3724153677094 1839.7821342411332 1533.5717760433408 1895.587268350316 1759.7060131045139 1723.5631920651401 1834.9118433606782 1843.9768658525654 1570.5949920422102 1525.8348820046515 1725.0129939821213 0.968904246633769 1.0665323337617718 0.8890204197842903 1.098882892455454 1.0201117436468146 0.9991595414515491 1.0637089979970875 1.0689640439147192 0.9104829920246319 0.8845352976051065 1.0 10.752391513963307 -8.76122890962326 24.999999865828997 0.9577280813230519 1.0221089507550687 0.2713201120390394 0.061970528868791175 6.800296043699976 807739.2412399607 0.010134269303219 0.011142209918357147 1.7328903784033326e-09 8.76122890962326 0.06438086943201682 GLVEDTLR ddPTM_A549_PD325901_60min_R1 2 GLVEDTLR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 98.99700000000001 0.006705199999999999 4116600.0 2290.7 2258.6 1939.12 2215.8 2242.0 2432.3 2716.0 2228.3 2483.3 3010.2 2888.8 False True 2523.2501776757867 2448.940148557388 2070.7203440758285 2352.6649335530824 2084.5296544801104 2412.4921552264964 2819.3588662522284 2183.854808432466 2378.935536908371 2820.1354582760546 2533.4959136119915 0.9959558900880178 0.9666248662173476 0.8173371557262998 0.9286239306377647 0.8227878495008929 0.9522384236992983 1.1128333979559033 0.8619926310909087 0.9389932401812069 1.113139927767005 1.0 11.306913786537553 -7.508145807046621 24.944189385966364 0.972900450718076 0.9040800618821055 0.1931375692148981 0.08555760792445707 943.9500353405157 1598192.948536129 0.011040915708394314 0.017271756981468808 3.103517459562673e-08 7.508145807046621 -0.06882038883597041 GLVGEIIK ddPTM_A549_MK2206_60min_R1 2 GLVGEIIK 8 0 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;F6XY72;E5RHP0;C9K028 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 138.9 0.0030234000000000003 19562300.0 3643.0 3629.87 3461.08 3630.6 5294.7 3803.15 3822.2999999999997 4111.5 6011.1 5251.5 4317.799999999999 False True 4257.849337201272 3814.614878571676 3951.9131878699195 4520.097162983826 4515.856643846676 4205.596808673347 4516.762433347409 4694.317715940667 4649.595447754217 4065.182502674852 3245.5710947823436 1.3118952606049181 1.1753293233058861 1.217632605313471 1.39269701109011 1.391390455475301 1.2957956198939422 1.391669540257079 1.4463764862484025 1.432597010501177 1.2525322613361127 1.0 11.66425664366231 -10.826896852221541 1.0688073495174784 0.9996582423916278 1.3428515665132876 0.2780091013189633 0.10841898636660137 0.2537817097623998 0.5138238034408273 0.06500796297976617 0.015985039000750077 1.489714852713182e-11 10.826896852221541 0.3431933241216598 GLVGEIIK ddPTM_A549_PD325901_60min_R1 2 GLVGEIIK 8 0 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;F6XY72;E5RHP0;C9K028 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 154.31 0.0012720000000000001 34074000.0 7600.4 7213.3 8231.3 7997.9 8420.3 8226.6 8079.0 8440.3 8300.099999999999 8512.7 9373.0 False True 8371.987012881238 7821.190106078549 8789.925516827923 8491.912118451208 7828.887176458023 8159.60529712054 8386.450765998436 8271.951595212744 7951.275661375254 7975.206669213528 8220.180420342422 1.0184675499534221 0.9514620976838302 1.0693105342402895 1.0330566586393084 0.9523984603894985 0.9926309253417386 1.0202270920045193 1.006298058220499 0.9672872436836408 0.9701984946069238 1.0 13.00495434385819 -6.735102781394827 24.999538876932267 0.9874036429680382 1.016975935251957 0.18443893572423287 0.03138936245334403 322.0697974554781 305717.2981218498 0.0044686795688596405 0.009300232853417419 1.8403364105610591e-07 6.735102781394827 0.029572292283918777 GLVIAK ddPTM_A549_PD325901_60min_R1 1 GLVIAK 6 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 118.11 0.0050992 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GLVLDHGAR ddPTM_A549_PD325901_60min_R1 2 GLVLDHGAR 9 0 P40227-2;P40227 P40227-2 CCT6A T-complex protein 1 subunit zeta 0 ; 128.61 5.4856000000000005e-05 10920300.0 560.36 836.5799999999999 716.12 677.52 863.45 825.0899999999999 598.22 705.59 592.04 762.23 809.23 False True 617.2473346847706 907.0815325777658 764.7202095793872 719.3688716404388 802.8042507407905 818.3707405977179 620.9855894585445 691.5164539253531 567.1586176745592 714.1026677170144 709.6998401316224 0.8697301306567783 1.2781199618271528 1.0775262531235186 1.0136241139733428 1.1311884339608993 1.153122340348761 0.8749975050626688 0.9743787652496906 0.7991528046129653 1.006203788329127 1.0 9.471065171131077 -7.7664931193366815 24.99934596754638 0.9069831295612033 1.0941087532559781 0.32544613824819113 0.10933921251794111 96.34491182540786 476590.1935454492 0.017208728863270652 0.0241739848320754 1.712012300434365e-08 7.7664931193366815 0.1871256236947748 GLVLGPIHK ddPTM_A549_MK2206_60min_R1 2 GLVLGPIHK 9 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ; 112.17 0.00031168 7223600.0 1270.55 1488.54 1380.4 1271.08 1852.7600000000002 1660.43 1387.6 1355.38 2482.09 2220.15 2266.6 False True 1484.9877780348827 1564.3003279316008 1576.1614769192379 1582.4946570609486 1580.2214583363307 1836.1356004957704 1639.7089586146724 1547.509265677165 1919.9005780832558 1718.6165730388593 1703.7406650223866 0.8716043518368275 0.9181563603232106 0.92511818804215 0.9288354087857351 0.927501168915028 1.0777083849622409 0.9624169876775978 0.9083009506360707 1.1268737182240285 1.008731321803766 1.0 10.734490037033552 -7.201561131726218 0.6354287861518063 1.0519336542060587 0.8904456973090784 0.34639899220528214 0.0598771550653729 0.5931890400227223 0.44945320608379385 0.014197793593619603 0.04414366830955528 6.286933523834786e-08 7.201561131726218 -0.16148795689698026 GLVLGPIHK ddPTM_A549_PD325901_60min_R1 2 GLVLGPIHK 9 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ; 124.08 9.8826e-05 18344000.0 2488.1 2460.0 2573.9 2567.0 2639.3 2652.1 2890.1000000000004 2700.8 2785.8 2329.0 2962.0 False True 2740.6900803575886 2667.3128333707496 2748.5803321180592 2725.5577599200096 2453.924673090703 2630.502176900953 3000.084337023404 2646.9304252633865 2668.7225138804574 2181.946542530374 2597.692777665021 1.0550478116280952 1.026800727285506 1.0580852192185197 1.0492225190578242 0.9446554627974343 1.0126302076665985 1.1549034446329252 1.0189543767537528 1.0273433936553817 0.8399555795399534 1.0 11.343015101765122 -9.757258158515558 0.9912607803590034 1.0044657252208846 1.038767169955801 0.14489195585968817 0.0684569541257941 0.9410092072974506 1.9085098447453541 0.015333089665383156 0.009478547039745511 1.7488068329384584e-10 9.757258158515558 0.034301444734916364 GLVRPGS(ph)SR ddPTM_A549_MK2206_60min_R1 1 GLVRPGSSR 9 1 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GLVRPGS(0.5)S(0.5)R 42.802 0.020716 6748800.0 2163.4 2355.3 1775.1 1635.8 3241.8 2172.6 2113.8 2720.2 3380.7 2966.6 3337.3 True False 2528.529029948184 2475.17470970031 2026.8358719786572 2036.5710734338522 2764.9355143864914 2402.503089944838 2497.8500985296155 3105.796680263119 2614.976847868557 2296.4429996068197 2508.556305205688 1.0079618403226784 0.9866929056222076 0.8079690568525898 0.8118498553162291 1.1022018954283672 0.9577234064705777 0.9957321242286428 1.238081311477065 1.0424230233310003 0.9154440722902266 1.0 11.29264160479714 -6.7677934946801 24.999973941154295 1.035314758072129 0.9027202075174111 0.2995565465047034 0.09733002463776129 138.10489462013447 543369.8081100422 0.01336012112992569 0.025691266631311188 1.7068938173764963e-07 6.7677934946801 -0.1325945505547178 GLVRPGS(ph)SR ddPTM_A549_PD325901_60min_R1 1 GLVRPGSSR 9 1 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GLVRPGS(0.5)S(0.5)R 41.68899999999999 0.023928 8634200.0 2330.6 2440.3 2227.3 2581.7 2687.2 2066.7 2451.6 2261.6 2526.0 2511.4 2670.3 True False 2567.2007963029605 2645.9526452335963 2378.4579718429436 2741.1657455338895 2498.460342336733 2049.869480412201 2544.8969795669946 2216.4906138091233 2419.8410044016223 2352.829775401796 2341.870028426369 1.096218306371171 1.1298460687895464 1.0156233877083094 1.1705029366535038 1.0668655015050452 0.8753130854958765 1.0866943718806847 0.9464618390024424 1.0332943224981816 1.0046799125666215 1.0 11.193445294511491 -7.009954601934686 24.959601404511037 1.0060008095902058 1.1012131308949291 0.4200416698544821 0.06096928160944275 371.4008597499851 931231.8885987275 0.008028005283366045 0.014555013488648941 9.77339379744141e-08 7.009954601934686 0.09521232130472335 GLVSSDELAK ddPTM_A549_PD325901_60min_R1 1 GLVSSDELAK 10 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 87.30799999999999 0.002015 1131800.0 1971.7 1810.3 2026.8 2185.1 2334.2 2074.0 2036.5 2190.4 2185.5 2125.7 2283.2 False True 2171.865532511177 1962.860334248402 2164.3508361385 2320.0686642778405 2170.253844552845 2057.1100316325087 2114.0001219155597 2146.710753664441 2093.6510352809746 1991.482939225769 2002.3808743972918 1.0846415685851472 0.9802632253163199 1.080888687967498 1.1586550260954582 1.0838366827719936 1.027332041538646 1.0557432649030194 1.072079133951273 1.0455808193389555 0.9945575113551747 1.0 10.967500701064676 -9.815135277252098 0.5127035337827205 0.9982312287778699 1.0704277230425194 0.30014534950002647 0.041055990898526885 0.9724841957684067 0.5275303901318052 0.030504442279840754 0.011992480330611554 1.5306106215224605e-10 9.815135277252098 0.07219649426464958 GLVYETSVLDPDEGIR ddPTM_A549_MK2206_60min_R1 2 GLVYETSVLDPDEGIR 16 0 A0A0C4DGI3;B4DJV2;O75390;F8W642;F8VZK9;F8VX07;F8VRP1;F8VX68;F8VPF9;F8VPA1;F8VTT8;F8W1S4;F8W4S1;H0YH82 A0A0C4DGI3 CS Citrate synthase;Citrate synthase, mitochondrial 0 ; 172.34 1.3167000000000002e-27 2689000.0 2735.2 2793.2 3296.2 3321.0 3961.6 2622.9 2603.61 2403.8999999999996 3923.6 4247.4 4707.0 False True 3196.834890780376 2935.361949278184 3763.65072458794 4134.645149085354 3378.853887899786 2900.4535370598906 3076.6522353262817 2744.6601866349924 3034.9108647017074 3287.9093900525863 3538.121993408797 0.9035400409414349 0.8296384225152494 1.0637424971776788 1.1685988094214461 0.9549851288887966 0.8197720549102531 0.8695721179365233 0.7757392740408746 0.857774511550329 0.9292809564445956 1.0 11.78876807725 -7.004007954033145 24.97968271320184 0.9051051999016043 0.9945952445184281 0.2061455897658171 0.09893522171095968 296.1510758565955 1845793.4121647782 0.016527914846450026 0.030732550485746604 9.908137981322431e-08 7.004007954033145 0.08949004461682375 GLWSTDS(ph)AEEDKETK ddPTM_A549_MK2206_60min_R1 2 GLWSTDSAEEDKETK 15 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GLWST(0.002)DS(0.998)AEEDKETK;GLWST(0.003)DS(0.996)AEEDKET(0.001)K 197.45 5.178e-39 57961000.0 37178.0 30397.0 24523.0 21246.2 46132.0 38845.0 32493.0 34858.0 48699.0 51024.0 51709.0 True False 43452.73748516849 31944.077463915564 28000.730149587416 26451.519953778163 39346.043910690845 42955.55211677586 38396.557503795426 39799.22824814783 37668.75425632289 39497.642962293 38868.22820420127 1.1179500453913584 0.8218557660022879 0.7204015064046788 0.6805434972443385 1.0122932206731752 1.105158482941417 0.987864877762685 1.0239527266088742 0.9691399890528397 1.0161935541487765 1.0 15.246303723931671 -6.796413057181503 24.998924147812957 0.9990251185960107 0.8260363166402397 0.38254564889200093 0.10910091952517736 142.9704710295532 102193.83711588962 0.015499016539128435 0.029291247797346365 1.5980374133221583e-07 6.796413057181503 -0.17298880195577104 GLWSTDS(ph)AEEDKETK ddPTM_A549_PD325901_60min_R1 2 GLWSTDSAEEDKETK 15 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GLWST(0.001)DS(0.999)AEEDKETK;GLWST(0.022)DS(0.978)AEEDKETK 222.7 1.5597999999999998e-54 75012000.0 45750.0 34502.0 34506.0 34529.0 36859.0 34760.0 32425.0 28412.0 47994.0 42698.0 57556.0 True False 50394.506320630084 37409.60462477953 36847.78466143433 36661.77790895131 34270.150996646946 34476.92608464126 33658.951118640834 27845.300371217185 45976.97908363082 40002.040993113755 50476.97687754492 0.998366174798564 0.741122130105646 0.7299919080103697 0.7263069259851137 0.678926376272195 0.6830228000436886 0.6668178880897735 0.5516435827519691 0.9108504892273775 0.7924809183829902 1.0 15.623337887841837 -8.926909112310454 7.354548192587723 0.9610617893165977 0.718449514201879 0.3016231007973299 0.11378225635345283 0.1282376521443337 10.824091764753817 0.01801314778163521 0.019076407939041213 1.1832891645943162e-09 8.926909112310454 -0.24261227511471872 GLWSTDS(ph)AEEDKETKR ddPTM_A549_MK2206_60min_R1 2 GLWSTDSAEEDKETKR 16 2 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GLWSTDS(1)AEEDKETKR;GLWSTDS(1)AEEDKETKR 137.14 3.1951999999999995e-11 56959000.0 3274.8 2641.7 2091.86 2276.4 4749.2 3293.6000000000004 2944.6000000000004 3239.5 4563.9 4622.0 4834.6 True False 3827.5061788269877 2776.1512463870063 2388.517203063081 2834.118102191478 4050.5989712271985 3642.126565885262 3479.5957044802262 3698.7090455526704 3530.1839370507 3577.88698988159 3634.0353918279534 1.053238553326724 0.7639307125709022 0.657263054849236 0.7798818108829398 1.1146283771302816 1.0022264984197742 0.9575018758223919 1.0177966493860109 0.9714225527327583 0.984549296885598 1.0 11.827356754692575 -6.741737485602148 24.99977059490954 0.9949921400721994 0.7988667934851729 0.47439851727066884 0.09691514548486892 156.58490314152843 198689.8528525554 0.01320779852931966 0.027464274055893294 1.8124353093772171e-07 6.741737485602148 -0.19612534658702652 GLWSTDS(ph)AEEDKETKR ddPTM_A549_PD325901_60min_R1 2 GLWSTDSAEEDKETKR 16 2 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GLWS(0.002)T(0.002)DS(0.996)AEEDKETKR;GLWST(0.002)DS(0.997)AEEDKETKR 195.78 7.5054e-40 66353000.0 7674.2 5417.2 5583.0 6083.9 6068.8 5911.5 5050.0 5219.3 8301.2 7136.2 9232.5 True False 8453.279134552557 5873.726455665056 5961.895953306314 6459.688685460599 5642.548424223416 5863.358703951577 5242.180513466032 5115.196967038359 7952.329432200613 6685.619114128489 8096.961029639536 1.0440063998836961 0.7254235798052922 0.7363127884007772 0.7977917470288448 0.6968723702100631 0.7241431300568585 0.6474256815954326 0.631742816633771 0.9821375455668506 0.8256948612763821 1.0 12.98316481856925 -8.781222823088163 23.8475503852209 0.9915650444005402 0.7446375217893026 0.31051648692504086 0.11499225817284377 74.00783174106361 89210.7591218826 0.017390734725757934 0.018528781535710057 1.65492065692461e-09 8.781222823088163 -0.24692752261123752 GLYDGPVCEVS(ph)VTPK ddPTM_A549_PD325901_60min_R1 1 GLYDGPVCEVSVTPK 15 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 GLYDGPVCEVS(0.861)VT(0.139)PK 98.796 3.4528e-06 21611000.0 1687.8 2037.1 1803.3 1927.8 2004.1 1730.4 1790.8 1948.0 1464.3 1866.4 2148.7 True False 1859.1442135073107 2208.7735662030705 1925.6827821238187 2046.875827648537 1863.3389297696667 1716.3081961122919 1858.9498739633611 1909.1456118235624 1402.7605632404172 1748.5551854781831 1884.4235217315438 0.9865851238149455 1.1721216280369344 1.021894897785166 1.0862079591151146 0.9888111182445318 0.910786867346691 0.9864819943741863 1.0131191793176633 0.744397714772452 0.9278992568886452 1.0 10.879907529885877 -7.256594368270369 0.9109790010350282 0.8890799739717301 1.0793502276397056 0.32740251013931077 0.08360338942605419 0.48278303305743486 0.7883591134158786 0.018810997616813412 0.04525007610993535 5.538671805237774e-08 7.256594368270369 0.19027025366797545 GLYDGPVCEVSVT(ph)PK ddPTM_A549_MK2206_60min_R1 6 GLYDGPVCEVSVTPK 15 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 GLYDGPVCEVS(0.156)VT(0.844)PK;GLYDGPVCEVS(0.444)VT(0.556)PK;GLYDGPVCEVS(0.014)VT(0.986)PK;GLYDGPVCEVS(0.237)VT(0.763)PK;GLYDGPVCEVS(0.07)VT(0.93)PK;GLYDGPVCEVS(0.026)VT(0.974)PK 190.86 1.0059e-33 459458600.0 15055.320000000002 16909.760000000002 16219.17 13047.94 21883.299999999996 16052.070000000002 16028.86 14702.82 23024.28 21051.27 21999.489999999998 True False 17596.2899487656 17770.394556575364 18519.292191831486 16244.685885744293 18664.295558632206 17750.689392898305 18941.0963810755 16786.98976049783 17809.31734221995 16295.773486258031 16536.409477964065 1.06409374853797 1.0746223102575967 1.1199101120778214 0.9823587101777738 1.1286788455198633 1.073430687390292 1.1454177163619375 1.015153246106277 1.0769760730678644 0.9854481112101936 1.0 14.013358398178344 -10.71678420634011 0.5577727179236981 0.9869193205022901 1.078443357685723 0.33480277230434763 0.04500607222008602 1.2574240663700067 0.5426777133575583 0.06003432943178102 0.009356581856574583 1.919622331949659e-11 10.71678420634011 0.09152403718343294 GLYDGPVCEVSVT(ph)PK ddPTM_A549_PD325901_60min_R1 3 GLYDGPVCEVSVTPK 15 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 GLYDGPVCEVS(0.003)VT(0.997)PK;GLYDGPVCEVS(0.007)VT(0.993)PK;GLYDGPVCEVS(0.002)VT(0.998)PK 233.21 7.1807e-55 534578000.0 27035.8 26801.6 32640.300000000003 27390.0 26462.300000000003 26946.7 30256.8 32845.5 21532.9 24604.8 30591.8 True False 29780.454513295983 29060.264892223364 34855.46704006881 29081.818092796668 24603.679337979054 26727.255009349916 31408.239081156236 32190.37073570371 20627.947095676842 23051.24872891855 26829.20253739797 1.1100014796110387 1.0831579824899922 1.2991615010354038 1.0839613310257252 0.917048477444803 0.996200128277911 1.1706735985676584 1.1998258498676082 0.7688617306803277 0.8591850129271182 1.0 14.711516552580997 -8.757103313030914 24.99999794215062 0.890851372124965 1.1043431359996485 0.4778649205718907 0.10742400015125421 85.8465147592249 494955.56634987984 0.02176203232840873 0.024256013511831754 1.7494304722750832e-09 8.757103313030914 0.2134917638746835 GMDGSTNETAS(ph)SR ddPTM_A549_MK2206_60min_R1 4 GMDGSTNETASSR 13 0 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 GMDGS(0.001)T(0.001)NET(0.138)AS(0.722)S(0.138)R;GMDGSTNET(0.006)AS(0.979)S(0.014)R;GMDGSTNETAS(0.994)S(0.006)R;GMDGSTNET(0.012)AS(0.959)S(0.029)R 113.25 8.9984e-06 32663300.0 1931.17 2280.23 2370.83 1697.9099999999999 3067.5700000000006 1905.81 1905.1999999999998 2222.4900000000002 3114.46 2954.23 3429.7200000000003 True False 2257.1042834265663 2396.2839673502076 2707.049343903532 2113.898026222077 2616.334516585407 2107.481549225709 2251.35017869175 2537.5347635901685 2409.0397827706392 2286.8673911981577 2578.0258685434496 0.8755165380484721 0.9295034609967184 1.0500473936023687 0.8199677326808211 1.0148596833373131 0.8174788216599269 0.8732845570567269 0.9842937553702058 0.9344513614720689 0.887061460128097 1.0 11.332051024789932 -10.174148262691057 0.5920668903537178 1.0018804514493491 0.9199997072348303 0.0 0.07766609127493593 1.2780735693051286 0.8264662511327013 0.05100083537449765 0.01551685721838829 6.696559582412433e-11 10.174148262691057 -0.08188074421451885 GMDGSTNETAS(ph)SR ddPTM_A549_PD325901_60min_R1 6 GMDGSTNETASSR 13 0 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 GMDGSTNET(0.033)AS(0.805)S(0.161)R;GMDGS(0.001)T(0.014)NET(0.015)AS(0.861)S(0.109)R;GMDGSTNETAS(0.927)S(0.073)R;GMDGSTNETAS(0.947)S(0.053)R;GMDGSTNET(0.001)AS(0.967)S(0.032)R;GMDGSTNET(0.143)AS(0.832)S(0.025)R 157.35 7.325499999999999e-19 60468500.0 4709.76 4895.849999999999 5183.67 4497.04 5228.07 5017.73 5366.54 5264.9800000000005 5677.8 4624.5 5524.72 True False 5187.89136805794 5308.440461487066 5535.465018139953 4774.811947281139 4860.8683990623695 4976.867270503078 5570.766616383371 5159.96584360309 5439.1818110813665 4332.50828077789 4845.214464085586 1.0707248165199692 1.095604849039206 1.1424602686157124 0.9854696799643659 1.0032308033200215 1.0271717191041487 1.149746137694385 1.0649612895054597 1.122588453286944 0.8941829743331172 1.0 12.242344809832884 -11.052387357215283 1.3756716087334206 1.0002568643964056 1.0781878687127482 0.3241941267133778 0.06078933844141081 0.5352418992181487 1.8162557922244784 0.038082285259515264 0.00860227975535549 8.86365090004162e-12 11.052387357215283 0.07793100431634259 GMDS(ph)EDDLRDEVEDAVQK ddPTM_A549_PD325901_60min_R1 1 GMDSEDDLRDEVEDAVQK 18 1 Q5T2D3 Q5T2D3 OTUD3 OTU domain-containing protein 3 1 GMDS(1)EDDLRDEVEDAVQK 45.011 0.009602 4172700.0 1829.7 1592.2 1367.9 1728.5 2074.8 1796.0 2158.6 2389.0 2047.2 1987.3 2554.7 True False 2015.449797046051 1726.3802818263866 1460.7339198509242 1835.2655192916795 1929.0732056714257 1781.3739714619014 2240.7467042312446 2341.3495208657573 1961.163303329769 1861.8215388452597 2240.4880955775925 0.8995583600842444 0.7705375829641844 0.6519712926545813 0.8191364742862213 0.8610057823914102 0.7950829888264447 1.0001154251406925 1.0450176126743325 0.8753285979072277 0.8309892574391414 1.0 11.129597345677478 -7.750755112353729 24.895147342983595 0.9530984422050008 0.7952058124725299 0.466369997267684 0.08018996131171989 134.23277421132929 312771.5831895752 0.012256655727085494 0.0180749700879423 1.7751901834605575e-08 7.750755112353729 -0.15789262973247098 GMGPGT(ph)PAGYGR ddPTM_A549_MK2206_60min_R1 5 GMGPGTPAGYGR 12 0 P23246 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 GMGPGT(0.999)PAGY(0.001)GR;GMGPGT(0.933)PAGY(0.067)GR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR 177.83 3.6286999999999997e-16 225011400.0 23274.4 25701.899999999998 22903.300000000003 22135.800000000003 27765.6 21131.0 21854.0 21346.37 32094.600000000002 36099.7 34260.1 True False 27202.549715552366 27010.01692830911 26151.332334341037 27559.071993713842 23681.3170208679 23367.068394377435 25824.58891724202 24372.283318016387 24825.224344544677 27944.75269766947 25752.37163934242 1.0563124086790703 1.0488360958198257 1.0154921923536206 1.070156658954521 0.9195781014859802 0.9073753952307481 1.0028042961988508 0.9464092728757594 0.9639975957250742 1.0851331709960923 1.0 14.652417681544762 -6.747739105373685 24.999963396469767 0.9718662840264136 1.0454800314266792 0.3591308758325452 0.04653247271657787 150.3038393437995 274269.5451992314 0.004933167151186758 0.010227403777571545 1.7875610976616416e-07 6.747739105373685 0.0736137474002656 GMGPGT(ph)PAGYGR ddPTM_A549_PD325901_60min_R1 4 GMGPGTPAGYGR 12 0 P23246 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 GMGPGT(0.987)PAGY(0.013)GR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR 176.18 5.5863e-16 515285000.0 29329.8 30914.7 32009.9 31453.2 34166.9 33551.2 32021.5 34177.1 35855.0 35977.4 37855.9 True False 32307.339704542424 33519.990264149106 34182.28430516567 33395.99272859995 31767.134813406108 33277.9701510649 33240.09570533716 33495.410929083715 34348.139039121175 33705.780824058515 33199.86428832183 0.9731166195130095 1.0096423880846972 1.0295910853222798 1.0059075072890318 0.9568453213400728 1.00235259584391 1.001211794622591 1.008902043640758 1.0345867302597156 1.0152385121620706 1.0 15.018889723803419 -8.318339363784247 3.1719701831759783 1.0164812897857918 0.9974988362891158 0.16702548972353481 0.01941177947070205 0.3998062097656595 8.034974128974639 0.0036623322623044723 0.004551274805296511 4.804637606194704e-09 8.318339363784247 -0.018982453496675933 GMKDDKEEEEDGT(ph)GSPQLNNR ddPTM_A549_MK2206_60min_R1 1 GMKDDKEEEEDGTGSPQLNNR 21 2 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 GMKDDKEEEEDGT(0.5)GS(0.5)PQLNNR 64.152 0.00047812 7259200.0 972.51 1106.1 1044.8 1259.2 1560.0 1049.4 1073.0 1096.0 1423.0 1420.4 1545.5 True False 1136.6459124132887 1162.3957654649155 1192.968350539857 1567.7040565276352 1330.5260665195037 1160.4468114646577 1267.950210863032 1251.3613563592305 1100.692772064056 1099.5306534893568 1161.709696369937 0.9784250884407983 1.0005905684502094 1.026907457403167 1.3494800477488762 1.1453171740556847 0.9989129083546211 1.0914518617044093 1.0771721715583793 0.9474766161489878 0.9464762641864187 1.0 10.182033878418968 -8.715961051529899 7.536592471069017 0.9752270403055138 1.0875469348404116 0.2240257326108408 0.09782298837977547 0.26708160201863573 36.91725277978845 0.01733260025653177 0.01957909537490196 1.923264203676914e-09 8.715961051529899 0.11231989453489788 GMKDDKEEEEDGT(ph)GSPQLNNR ddPTM_A549_PD325901_60min_R1 1 GMKDDKEEEEDGTGSPQLNNR 21 2 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 GMKDDKEEEEDGT(0.548)GS(0.452)PQLNNR 60.521 0.00017752 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GMKDDKEEEEDGTGS(ph)PQLNNR ddPTM_A549_MK2206_60min_R1 3 GMKDDKEEEEDGTGSPQLNNR 21 2 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 GMKDDKEEEEDGT(0.274)GS(0.726)PQLNNR;GMKDDKEEEEDGT(0.243)GS(0.757)PQLNNR;GMKDDKEEEEDGT(0.122)GS(0.878)PQLNNR 129.93 6.2954e-18 171542200.0 5806.4 6985.299999999999 7135.0 6909.6 8926.1 8091.3 7624.1 7279.700000000001 10442.9 10406.9 11058.599999999999 True False 6786.378367149451 7340.821933371368 8146.850288190933 8602.452310183728 7613.082514333173 8947.515995429754 9009.30028205111 8311.619768146244 8077.599823884564 8055.974062094045 8312.444418166668 0.8164118790759031 0.8831123029620698 0.9800787684530158 1.0348884007432584 0.9158656745655882 1.0764000990942149 1.08383284492844 0.9999007933191563 0.9717478298238175 0.9691462170246682 1.0 13.021057073498206 -5.631986638965291 2.3956527458055263 0.9986855780696097 0.8189455379896063 0.6379984433194259 0.04593467628218236 0.15763493828749026 1.642420184924875 0.0064598735360564255 0.042100690607844916 2.3335298520343887e-06 5.631986638965291 -0.17974004008000333 GMKDDKEEEEDGTGS(ph)PQLNNR ddPTM_A549_PD325901_60min_R1 8 GMKDDKEEEEDGTGSPQLNNR 21 2 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 GMKDDKEEEEDGT(0.214)GS(0.786)PQLNNR;GMKDDKEEEEDGT(0.057)GS(0.943)PQLNNR;GMKDDKEEEEDGT(0.155)GS(0.845)PQLNNR;GMKDDKEEEEDGT(0.066)GS(0.934)PQLNNR;GMKDDKEEEEDGT(0.031)GS(0.969)PQLNNR;GMKDDKEEEEDGT(0.044)GS(0.956)PQLNNR;GMKDDKEEEEDGT(0.086)GS(0.914)PQLNNR;GMKDDKEEEEDGT(0.002)GS(0.998)PQLNNR 167.72 2.0311999999999998e-35 550281000.0 26280.8 27277.5 25507.9 26046.9 31012.7 26579.699999999997 28793.899999999998 27724.700000000004 30108.500000000004 30713.100000000002 31838.6 True False 28948.807469097595 29576.270655394575 27239.019485463417 27655.75785619811 28834.47494000687 26363.243735671447 29889.667621126668 27171.709108893596 28843.144450129148 28773.869624469575 27922.654041514365 1.03674985286347 1.0592213265766812 0.9755168489702108 0.9904415896526367 1.0326552374690758 0.9441525041450414 1.070445079349829 0.9731062480126605 1.0329657204951304 1.0304847663008558 1.0 14.769148455429173 GMLPDPK ddPTM_A549_PD325901_60min_R1 1 GMLPDPK 7 0 P05141;P12236;P12235 P05141;P12236 SLC25A5;SLC25A6;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 0 48.504 0.034523000000000005 3737600.0 1993.5 2269.6 1998.5 2317.1 3015.0 1996.2 2033.0 2532.6 2839.1 2486.2 2261.1 False True 2195.8786524628636 2460.867157161894 2134.130227956776 2460.2220044840883 2803.236801185343 1979.9436090380004 2110.3669275002853 2482.0853062137344 2719.782500236199 2329.220907702453 1982.9990342938484 1.1073523559454592 1.2409825292921617 1.0762134479388417 1.240657187389998 1.4136349805049622 0.9984591897408887 1.0642299320391717 1.2516825592391738 1.3715500881243352 1.1745950791811128 1.0 10.953468259646995 -11.128020670365572 1.5077616792485602 1.0006875724860664 1.218089606610245 0.01633365023252842 0.13323226132886137 0.4436896098276708 1.8153215245260925 0.0949746208269888 0.020747078604254947 7.446965290259293e-12 11.128020670365572 0.21740203412417847 GMLPHK ddPTM_A549_MK2206_60min_R1 1 GMLPHK 6 0 P40429;Q8J015 P40429 RPL13A;RPL13a 60S ribosomal protein L13a 0 45.925 0.026726 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GMSNNT(ph)PQLNR ddPTM_A549_MK2206_60min_R1 1 GMSNNTPQLNR 11 0 F8VQD8;A0A087X050;F8VVY1;F8VX63;F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8;F8VWH8;F8W145 F8VQD8 CNOT2 CCR4-NOT transcription complex subunit 2 1 GMS(0.023)NNT(0.977)PQLNR 59.597 0.009723200000000001 2445900.0 1403.3 1272.6 1034.9 971.03 1270.3 1030.2 1143.7 1198.9 1724.1 1773.5 2411.3 True False 1640.142732608988 1337.3699042859143 1181.664381674673 1208.9323935911932 1083.4405527562342 1139.2150802085848 1351.4954857074083 1368.8477464772643 1333.5941028219534 1372.865118250756 1812.5076615055525 0.9049025101756589 0.7378561385914547 0.6519500064861122 0.6669943632607865 0.5977577782243847 0.628529801227047 0.7456495298810455 0.7552231505273949 0.7357729465894829 0.7574396221367643 1.0 10.823771378102876 -10.444766093511088 0.557290121223033 1.0298340320517876 0.6978692485476873 0.14329369704360106 0.10477859600313229 0.5264776108363335 0.26221869181398627 0.08721043442898205 0.01887364511074444 3.591152983314115e-11 10.444766093511088 -0.3319647835041003 GMYDGPVFDLTT(ph)TPK ddPTM_A549_MK2206_60min_R1 1 GMYDGPVFDLTTTPK 15 0 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLT(0.007)T(0.872)T(0.121)PK 100.73 3.5062e-06 17085000.0 2249.6 2278.2 2395.4 1714.0 3212.6 2353.5 1718.0 2226.6 3005.5 2681.8 2111.5 True False 2629.277482560521 2394.150649021038 2735.1037393598535 2133.9300769443844 2740.030795705488 2602.545807873138 2030.1383618477987 2542.2273686765147 2324.7590487972725 2075.9795174090104 1587.1562755646219 1.6565964694466968 1.5084530023165694 1.7232731152367815 1.3444990325135129 1.7263774449247207 1.6397539725237813 1.2791042653475244 1.6017498766919671 1.4647322917021846 1.3079868374464212 1.0 10.632228471362048 -10.841953363597735 0.344813700376206 0.7607049558437988 1.6027547558043032 0.44123619437165595 0.16112734645743404 1.211820222517179 0.17013902694565958 0.3900171381641067 0.04775775959193989 1.4389530909078876e-11 10.841953363597735 0.8420497999605043 GMYDGPVFDLTT(ph)TPK ddPTM_A549_PD325901_60min_R1 3 GMYDGPVFDLTTTPK 15 0 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLT(0.002)T(0.707)T(0.292)PK;GMY(0.002)DGPVFDLT(0.103)T(0.448)T(0.448)PK;GMYDGPVFDLT(0.078)T(0.588)T(0.334)PK 175.66 7.961799999999999e-28 62180700.0 14368.699999999999 14102.4 14051.0 13703.5 18841.8 15361.0 15311.9 15362.5 15215.5 16156.1 18333.0 True False 15827.399846322123 15290.858740377098 15004.585355526968 14549.93407209344 17518.416968681246 15235.905108923313 15894.60273349318 15056.0828858519 14576.045448326557 15136.001088782734 16078.15722246214 0.9844038484839734 0.9510330399689625 0.9332279282954561 0.9049503541218218 1.0895786579451392 0.9476151338810053 0.9885836115153469 0.936430878087052 0.9065743820419269 0.9414014852172762 1.0 13.972814442884475 -5.2482964921949256 21.242920898542074 0.9589528802286347 0.984403974168358 0.019439357628592613 0.049501197537301485 1109.6553721149457 1793258.3223962036 0.007090438051490796 0.15157351956257126 5.645514248045395e-06 5.2482964921949256 0.025451093939723335 GMYDGPVFDLTTT(ph)PK ddPTM_A549_MK2206_60min_R1 6 GMYDGPVFDLTTTPK 15 0 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLT(0.01)T(0.185)T(0.805)PK;GMYDGPVFDLT(0.105)T(0.143)T(0.752)PK;GMYDGPVFDLT(0.195)T(0.195)T(0.609)PK;GMYDGPVFDLT(0.217)T(0.217)T(0.566)PK;GMYDGPVFDLT(0.01)T(0.103)T(0.886)PK;GMYDGPVFDLT(0.276)T(0.276)T(0.448)PK 81.431 0.00022159999999999997 42935460.0 4655.89 5185.17 4362.28 3689.2299999999996 7376.110000000001 4928.16 4732.52 5448.73 7292.550000000001 5938.36 6858.12 True False 5441.690406418347 5449.073005348265 4980.916899112757 4593.091515615829 6291.093990073836 5449.654620152147 5592.3576252688845 6221.104163535787 5640.799068809367 4596.880351629863 5155.059529517044 1.0556018558583273 1.0570339632641963 0.9662190844922014 0.8909870951667044 1.2203727142338592 1.0571467873354903 1.084828912886057 1.206795795065943 1.0942257866298257 0.891722069417213 1.0 12.331773372283239 -6.738854878142844 24.99999657833638 1.0721590554525056 0.9951985925692909 0.16115013298082015 0.0943415919490425 355.96348509661186 394033.14263598673 0.012096990129844146 0.025167715736687354 1.824505268802423e-07 6.738854878142844 -0.07696046288321468 GMYDGPVFDLTTT(ph)PK ddPTM_A549_PD325901_60min_R1 3 GMYDGPVFDLTTTPK 15 0 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLT(0.247)T(0.247)T(0.505)PK;GMYDGPVFDLT(0.007)T(0.142)T(0.851)PK;GMYDGPVFDLTT(0.113)T(0.887)PK 155.02 2.2049e-19 15886800.0 3353.41 3178.86 3659.89 3446.9799999999996 5053.58 4382.33 3858.28 4137.58 3632.9400000000005 3886.28 4341.24 True False 3693.8457145500356 3446.75368841014 3908.272144106441 3659.892125940429 4698.633974704549 4346.641757436878 4005.1089567318295 4055.052721031285 3480.260165689162 3640.899617563306 3807.295001387744 0.9702021285988197 0.9053025014226143 1.0265220169915625 0.9612840939844202 1.2341134514115442 1.1416614041865798 1.0519565610944208 1.0650744740171787 0.9141031006057111 0.9562956419810423 1.0 11.89455064351693 -8.750357437444686 24.761869044049362 0.9594375740940974 1.0463063376693196 0.169963019476836 0.08620947627115708 272.03761257254024 607849.2441679449 0.01601663991644727 0.018076393099317103 1.7768164346206883e-09 8.750357437444686 0.08686876357522222 GNAEGS(ph)S(ph)DEEGK ddPTM_A549_MK2206_60min_R1 1 GNAEGSSDEEGK 12 0 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGK 52.57899999999999 0.028260000000000004 1348800.0 892.35 1401.4 478.37 575.8 411.57 137.11 351.82 423.91 621.68 1332.1 1278.8 True False 1042.9568641371268 1472.7252741366344 546.2100591957807 716.8710258486441 351.0285982034822 151.618889193748 415.74113996815663 484.000540669928 480.87047261896146 1031.1776848163704 961.2386669154804 1.0850134311428317 1.532111976791845 0.56823562970944 0.7457783904480374 0.3651836014149308 0.15773282371201108 0.4325056349451991 0.5035175522256483 0.500261266186916 1.0727592639664791 1.0 9.908750873453902 -5.769376575926327 24.99929802388334 0.6421379979830056 1.308562737931952 0.4970656290535437 0.2737441041860293 110.40746574585103 347748.292868994 0.04197629908122195 0.13395392432339595 1.700683209668817e-06 5.769376575926327 0.6664247399489464 GNAEGS(ph)S(ph)DEEGK ddPTM_A549_PD325901_60min_R1 2 GNAEGSSDEEGK 12 0 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGK;GNAEGS(1)S(1)DEEGK 65.295 0.0068744 11307900.0 2587.3900000000003 2807.7 2656.3 2497.67 3083.4 1871.06 1985.56 1911.4299999999998 2370.9300000000003 2444.6 2729.0 True False 2850.0599280641554 3044.3147326240082 2836.5724916295117 2651.9454032798653 2866.8326211525305 1855.822707707965 2061.1215723401233 1873.3050291621726 2271.2880572311715 2290.2475388019534 2393.3503005563293 1.1908243968305288 1.2719887815487618 1.1851890176587005 1.1080473270726088 1.1978324361820922 0.775407890469098 0.8611867522531156 0.7827124298213791 0.9489994242394083 0.9569211570364732 1.0 11.224815855750416 -7.236392623985295 24.54968431760593 0.9371627099292767 1.1903817641337588 0.7618054437185792 0.08190473248921168 307.1382163892755 301042.8849687266 0.013948183712901107 0.02415172883329294 5.8023961463065284e-08 7.236392623985295 0.2532190542044821 GNAEGS(ph)S(ph)DEEGKLVIDEPAK ddPTM_A549_MK2206_60min_R1 4 GNAEGSSDEEGKLVIDEPAK 20 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK 67.43 0.00039463 21639000.0 16208.199999999999 19068.300000000003 17138.699999999997 15269.0 20647.9 17766.0 16328.0 17095.8 25319.3 24671.7 26125.5 True False 18943.747907555768 20038.795022705584 19569.225372700475 19009.90568545146 17610.621262107736 19645.98632788364 19294.586246944626 19519.18200369171 19584.518976613803 19098.345834760177 19637.817322881136 0.9646564888595501 1.0204186490398424 0.9965071500028295 0.9680253855555495 0.8967708056632445 1.0004159833482607 0.9825219335584412 0.9939588337523031 0.9972859332892748 0.9725289486478526 1.0 14.261346967427837 GNAEGS(ph)S(ph)DEEGKLVIDEPAK ddPTM_A549_PD325901_60min_R1 3 GNAEGSSDEEGKLVIDEPAK 20 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK 150.11 7.6942e-22 564010000.0 63600.0 65034.0 62577.0 65351.0 74830.0 60924.0 65008.0 66701.0 66739.0 66745.0 74817.0 True False 70056.6251801546 70514.64341684281 66823.85152607002 69387.58284711042 69574.19894948561 60427.8551432878 67481.91501374259 65370.596229077826 63934.191921124264 62530.70930922711 65614.9833040391 1.0676924941904555 1.074672885156432 1.0184236611999034 1.0574960070566548 1.0603401151090865 0.9209459806350055 1.028452826103037 0.9962754379768892 0.9743840309289332 0.9529943644042332 1.0 16.00173767412116 -7.208970411727492 24.999995827041282 0.9875137966845199 1.0548038171850194 0.6193906680583556 0.029582317367309097 174.26290046911328 83031.33319686243 0.003861022996941957 0.006687485637551608 6.180585067304803e-08 7.208970411727492 0.06729002050049948 GNAEGS(ph)S(ph)DEEGKLVIDEPAKEK ddPTM_A549_MK2206_60min_R1 4 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK 145.67 2.0454000000000003e-27 190744000.0 54199.899999999994 55602.0 54155.1 48688.9 78032.0 61225.3 56638.3 60728.799999999996 81567.0 76829.0 79636.0 True False 63347.518059669244 58431.90430465622 61835.10750413572 60617.68268572775 66553.59616836536 67704.120607935 66928.74597196985 69337.29337414999 63092.20473573359 59473.27553994216 59860.183358211834 1.0582580023283374 0.976139748102531 1.0329922836037047 1.012654477233772 1.1118174458320516 1.1310376415451975 1.118084546641943 1.158320764893515 1.0539928412544426 0.9935364745551418 1.0 15.86930907752308 -4.9114598438417145 19.784569435122457 1.0483987446223624 1.6149157598918582 0.0 0.06023443279608636 4101.350725795185 1258134.6475266402 0.008872769901289275 38775.26084755098 1.2261402700094943e-05 4.9114598438417145 0.5665170152694958 GNAEGS(ph)S(ph)DEEGKLVIDEPAKEK ddPTM_A549_PD325901_60min_R1 4 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK 153.01 6.3871e-28 768293000.0 126934.0 139209.0 139593.0 137420.0 153637.0 136776.0 140800.0 153396.0 147695.0 151769.0 159101.0 True False 139820.24623612795 150940.63098402787 149066.62042090093 145908.12129653603 142846.06713887636 135662.14160393836 146158.2210487167 150336.3964431662 141487.89277319761 142186.27943894026 139532.58562433592 1.002061601671788 1.0817590049567767 1.0683283747226868 1.0456920915187868 1.0237470086267972 0.9722613610069696 1.0474845025965405 1.0774285860932686 1.01401326536101 1.01901845223272 1.0 17.090242554404217 -9.108376809985083 0.21927696834833246 0.9853801644522993 1.0562376376025975 0.07027067214760663 0.03228991233956225 3.0638627184544585 0.524425575642516 0.0801649609078922 0.05540584086094355 7.791537944639836e-10 9.108376809985083 0.07085747315029822 GNAEGS(ph)S(ph)DEEGKLVIDEPAKEKNEK ddPTM_A549_PD325901_60min_R1 1 GNAEGSSDEEGKLVIDEPAKEKNEK 25 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGKLVIDEPAKEKNEK 61.498999999999995 0.00010986 10652000.0 1048.0 1352.2 1164.2 1164.4 1332.4 2025.9 1058.3 1846.7 1298.7 1372.3 1855.3 True False 1154.3921885031762 1466.154639546312 1243.2096129033166 1236.3223434557306 1238.8168205304644 2009.401742085005 1098.574185623981 1809.8661197918755 1244.1201553509047 1285.6527438018165 1627.1098617157043 0.7094740285612482 0.9010790691172671 0.7640600319344236 0.7598272080731486 0.7613602803834003 1.234951486291278 0.6751690291309468 1.1123195565193515 0.7646196391674767 0.7901450135924819 1.0 10.668095949072336 GNAEGS(ph)SDEEGK ddPTM_A549_MK2206_60min_R1 3 GNAEGSSDEEGK 12 0 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.958)S(0.042)DEEGK;GNAEGS(0.986)S(0.014)DEEGK;GNAEGS(0.802)S(0.198)DEEGK 96.756 0.0002556 13524000.0 5986.299999999999 5390.3099999999995 3973.44 3198.56 1324.3890000000001 526.31 1166.74 1221.2 1686.5300000000002 6856.5 7183.8 True False 6996.641089016738 5664.653755124478 4536.933540169497 3982.207343588817 1129.5731325075 582.0037748636969 1378.7215554728186 1394.3088397681493 1304.533647834991 5307.611887953941 5399.864197206312 1.2957068610422717 1.049036336516603 0.8401940075672156 0.7374643506125694 0.20918547045903468 0.10778118737963889 0.255325227657784 0.2582118343808558 0.24158638072970573 0.9829158093827435 1.0 12.398707409626967 -5.918725916934036 1.5207622440571387 0.5126804669871479 1.2580724883307717 0.47057877306791573 0.29555815935674196 0.4208140477983104 1.69462469350789 0.0535974263292635 0.3231267713339948 1.2057966780753529e-06 5.918725916934036 0.7453920213436238 GNAEGS(ph)SDEEGK ddPTM_A549_PD325901_60min_R1 2 GNAEGSSDEEGK 12 0 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.871)S(0.129)DEEGK;GNAEGS(0.871)S(0.129)DEEGK 118.13 2.0297e-05 24947000.0 4462.7 3496.2 3292.3 2724.3 3020.7 2326.9 2338.48 2674.9 2699.6 3004.4 4206.3 True False 4915.7500187339 3790.8370439149694 3515.735276208202 2892.5738236657926 2808.536452849275 2307.9504978812374 2427.472136065356 2621.547021081544 2586.1452001118823 2814.7016712658888 3688.951765932606 1.3325601229408177 1.0276190323016072 0.9530445230203184 0.7841180929440857 0.7613372662624791 0.625638567355397 0.658038459185889 0.7106482240541817 0.7010515084515011 0.7630085319248685 1.0 11.84899521018038 -5.318077844833101 1.2469659679073237 0.8043680498380241 1.526694269492759 0.7255122134441114 0.10549437487724532 0.7771426987058165 1.0799907070219825 0.02148572569735381 0.6984913711387307 4.807531684360433e-06 5.318077844833101 0.7223262196547349 GNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A549_MK2206_60min_R1 2 GNAEGSSDEEGKLVIDEPAK 20 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.841)S(0.159)DEEGKLVIDEPAK;GNAEGS(0.836)S(0.164)DEEGKLVIDEPAK 240.44 6.1440999999999984e-86 278770000.0 19837.2 20723.4 18663.1 18525.7 25574.0 20785.0 19899.5 22431.9 27701.0 26210.0 27164.0 True False 23185.234387024175 21778.132543201908 21309.808214931487 23064.497331650284 21812.098477672935 22984.454904033646 23514.981566699815 25611.690519812615 21426.767729407184 20289.142796364446 20418.429111739224 1.1355052957376737 1.0665919706174136 1.0436556161257176 1.129592154490952 1.068255464624967 1.1256720474553612 1.1516547839216622 1.2543418683020828 1.0493837509315658 0.99366815563199 1.0 14.317584256544764 -8.980116705218213 20.262997904376494 1.0217860023128826 1.1192173596268615 0.44564754457166933 0.053992240479330295 12.439448075084634 12677.998394740107 0.010038609177139788 0.010267375316515505 1.0468471976020194e-09 8.980116705218213 0.0974313573139789 GNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A549_PD325901_60min_R1 2 GNAEGSSDEEGKLVIDEPAK 20 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.853)S(0.147)DEEGKLVIDEPAK;GNAEGS(0.832)S(0.168)DEEGKLVIDEPAK 212.28 5.0989999999999994e-67 500510000.0 29218.0 29721.0 28210.0 26914.0 31572.0 27298.0 27476.0 28161.0 29104.0 28312.0 30011.0 True False 32184.189850845247 32225.692975858565 30124.500240510675 28576.416653871107 29354.491637487117 27075.694138623065 28521.614215444122 27599.30676312287 27880.86009188628 26524.375488243866 26319.837255403447 1.2228111267761677 1.2243880029783485 1.1445549586111567 1.0857368294708731 1.1152991317019127 1.0287181442607303 1.0836546570814625 1.0486123639482896 1.0593097450160849 1.0077712575064812 1.0 14.683862947971074 -2.0000000000000044 0.24235483294368387 1.012542241490721 2.451307577194897 0.891969715945873 0.024387407181759496 9.885783190257795 0.11893269008574718 0.01262003887125362 5.829746191071177 0.009999999999999898 2.0000000000000044 1.438765335704176 GNAEGS(ph)SDEEGKLVIDEPAKEK ddPTM_A549_MK2206_60min_R1 4 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.968)S(0.032)DEEGKLVIDEPAKEK;GNAEGS(0.983)S(0.017)DEEGKLVIDEPAKEK;GNAEGS(0.984)S(0.016)DEEGKLVIDEPAKEK;GNAEGS(0.982)S(0.018)DEEGKLVIDEPAKEK 200.43 5.401899999999999e-61 1360481000.0 15498.0 17904.3 16584.3 15272.099999999999 20934.3 16914.0 17103.399999999998 16446.3 22631.899999999998 21331.5 23611.899999999998 True False 18113.683510278694 18815.552394551556 18936.20311625016 19013.76518559063 17854.892201499526 18703.828253395463 20210.866390004452 18777.61338968139 17505.81078571785 16512.699334629844 17748.41357471194 1.0205804273170191 1.0601258707065562 1.0669237020276894 1.0712937866560408 1.0059993320720957 1.0538309902832557 1.1387421363000596 1.0579882709312038 0.9863310155596244 0.9303760736203066 1.0 14.115402455987576 -8.755849868467498 23.295978786519612 0.9935451981712349 1.0607789984994025 0.5038013220177522 0.03690755444070346 36.28214483572116 151215.85245842751 0.00545546893506952 0.0060950171892668 1.7544869067033543e-09 8.755849868467498 0.06723380032816761 GNAEGS(ph)SDEEGKLVIDEPAKEK ddPTM_A549_PD325901_60min_R1 4 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.844)S(0.156)DEEGKLVIDEPAKEK;GNAEGS(0.571)S(0.429)DEEGKLVIDEPAKEK;GNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK;GNAEGS(0.887)S(0.113)DEEGKLVIDEPAKEK 230.45 3.7663e-88 1115459900.0 21650.6 22799.2 22367.7 21433.7 26620.699999999997 21971.1 23363.0 25458.5 23408.6 24082.800000000003 26327.2 True False 23848.552973670674 24720.568597799363 23885.7066299068 22757.610969535468 24750.953868429388 21792.174646094983 24252.091749724153 24950.71024569311 22424.817947599277 22562.207898003653 23089.12130187121 1.0328913197635596 1.0706587000257968 1.0345004609582535 0.9856421416821576 1.0719746994626207 0.9438286698389375 1.0503687616626056 1.0806262360305166 0.9712287295134918 0.9771791487004378 1.0 14.494925649345985 -7.082951388865973 0.3248434462216058 0.9865834941831868 1.058910888298999 0.12703661314636316 0.041628838041393064 3.1272878029667766 0.5460992545663916 0.0197547523800635 0.08047420250865281 8.261304142308082e-08 7.082951388865973 0.07232739411581224 GNAEGS(ph)SDEEGKLVIDEPAKEKNEK ddPTM_A549_PD325901_60min_R1 1 GNAEGSSDEEGKLVIDEPAKEKNEK 25 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEKNEK 67.809 3.0101999999999997e-05 14803000.0 1816.5 2460.5 3308.4 2934.5 3246.4 4639.8 3947.7 3690.5 3848.4 3359.2 4257.7 True False 2000.9097427633783 2667.854970125502 3532.927919025364 3115.7574002669553 3018.384063472003 4602.015007120789 4097.931883764327 3616.8900823587587 3686.6651311714945 3147.0995387153425 3734.0298917840532 0.5358579874162119 0.7144707052280314 0.9461434486099933 0.8344221901175788 0.8083449117837331 1.2324526424511368 1.0974555647722486 0.9686291184537553 0.9873153772237403 0.8428158397017316 1.0 11.86651776138421 -4.909935715255401 0.6751420670226997 1.0069848629130553 3.1960603052975975e-10 0.6028424635784149 0.11346050123235292 1.9424471005618569 0.4421597442345872 0.01687308796159799 1.6700244909287014 1.2304508900209256e-05 4.909935715255401 -1.0069848625934492 GNAEGSS(ph)DEEGK ddPTM_A549_PD325901_60min_R1 2 GNAEGSSDEEGK 12 0 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.081)S(0.919)DEEGK;GNAEGS(0.081)S(0.919)DEEGK 154.13 1.0595999999999998e-13 20884100.0 7561.1 7507.6 7187.1 5870.200000000001 7310.5 6197.6 5209.8 4820.2 6610.799999999999 7423.9 7242.1 True False 8328.697305812375 8140.291799924491 7674.85982554323 6232.78892180851 6797.035699855869 6147.128800407734 5408.061789911952 4724.057329626249 6332.971065676264 6955.153687029303 6351.367611454372 1.311323452730399 1.2816596830647755 1.2083790917253798 0.9813302115544357 1.070168838534516 0.9678433333510245 0.8514798891751729 0.7437858456038112 0.9971035299948736 1.0950639472490984 1.0 12.632851559038897 -6.136412281629024 1.5252134098399448 0.9673710286245013 1.3182413179999095 0.6882824305684783 0.09208902556292803 0.19252115380239485 0.8167142345279326 0.01365545658769082 0.060851504618201026 7.304453326025342e-07 6.136412281629024 0.3508702893754082 GNAEGSS(ph)DEEGKLVIDEPAKEK ddPTM_A549_PD325901_60min_R1 1 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.11)S(0.89)DEEGKLVIDEPAKEK 217.07 3.7490999999999995e-74 835220000.0 14914.0 15691.0 15622.0 14985.0 17761.0 16891.0 15967.0 17213.0 16297.0 16393.0 17567.0 True False 16428.058300893477 17013.335637569282 16682.202862717408 15910.58941659578 16513.528632123678 16753.44529619321 16574.63292247766 16869.673211662735 15612.093764344114 15357.94318235312 15406.370366388053 1.0663159401084132 1.1043052473077715 1.0828120099665284 1.0327279585143414 1.0718636667434078 1.0874362291551851 1.0758298371586856 1.0949803756806442 1.0133531385435783 0.9968566779271653 1.0 13.911239392524804 -8.820878442188777 6.505518956611779 1.0060053819174772 1.076752678144853 0.7730164809876402 0.017765755652427606 0.06957378795078031 5.803432454153827 0.0031666174264317276 0.0033711181156998223 1.5105028805344099e-09 8.820878442188777 0.07074729622737586 GNAGGLHHHR ddPTM_A549_PD325901_60min_R1 1 GNAGGLHHHR 10 0 E9PLL6;P46776;E9PLX7;H0YF34 E9PLL6 RPL27A 60S ribosomal protein L27a 0 118.71 6.8795e-05 6688900.0 1124.3 1689.8 1044.0 1118.1 1456.8 1308.1 1766.0 1505.1 1138.6 1466.0 1959.5 False True 1238.438108334085 1832.2053763536148 1114.8521180819982 1187.1624976106602 1354.479393687166 1297.447267299173 1833.2060963922797 1475.0795997718917 1090.7486015881568 1373.436509810874 1718.4939222939258 0.7206531790819254 1.0661692500535014 0.6487378882282235 0.6908156509660391 0.7881781693351256 0.7549908966610018 1.0667515739277278 0.858356017810576 0.6347119343501516 0.7992094077222844 1.0 10.746929034078484 GNDISSGTVLSDYVGSGPPK ddPTM_A549_MK2206_60min_R1 1 GNDISSGTVLSDYVGSGPPK 20 0 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 0 120.3 9.572e-18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GNDISSGTVLSDYVGSGPPK ddPTM_A549_PD325901_60min_R1 2 GNDISSGTVLSDYVGSGPPK 20 0 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 0 ; 165.02 3.3931e-55 2086900.0 981.84 876.54 1084.5 1478.0 1378.3 1235.0 1214.4 1819.8 1352.0 1141.4 1257.1 False True 1081.515674007594 950.4091020173975 1158.1006916282818 1569.2927032184557 1281.4929628768673 1224.9425694629447 1260.614656545179 1783.502661394518 1295.1801417066467 1069.331809207457 1102.4846694134699 0.9809802385578463 0.8620610593370176 1.050446073090885 1.4234145351457188 1.162368056835322 1.11107446973809 1.1434305542006635 1.6177119835537985 1.1747829041429594 0.969928960351303 1.0 10.106542879206845 -5.996793495726209 18.108270289325898 1.1556643074369788 0.9301992700792242 0.24749251300685315 0.1793110900846597 3.955363021973318 22294.347190920693 0.0259315895170438 0.07925664122738499 1.0074105723276456e-06 5.996793495726209 -0.22546503735775458 GNDPLTS(ph)S(ph)PGR ddPTM_A549_MK2206_60min_R1 1 GNDPLTSSPGR 11 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 2 GNDPLT(0.138)S(0.895)S(0.966)PGR 44.753 0.060717999999999994 7939300.0 518.92 731.52 710.84 506.39 995.44 683.87 442.88 751.85 927.41 1018.5 948.43 True False 606.5010096240694 768.7512434254543 811.6478008209732 630.4555727327106 849.0120946513939 756.2366694838335 523.3455632684247 858.4270399440579 717.3531157694489 788.4201426210296 712.90865566363 0.8507415428411257 1.0783306350935544 1.1385018183927493 0.8843427102814935 1.1909128720860716 1.0607763890590869 0.7340990449628565 1.204119255846274 1.0062342630721486 1.1059202835559736 1.0 9.477573427084437 GNDPLTS(ph)S(ph)PGR ddPTM_A549_PD325901_60min_R1 1 GNDPLTSSPGR 11 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 2 GNDPLT(0.259)S(0.918)S(0.823)PGR 51.066 0.029148 16716000.0 703.89 979.93 797.07 844.54 896.8 663.85 657.23 748.88 1025.2 984.76 896.44 True False 775.3483946235691 1062.5121401646345 851.163963371282 896.7053177104975 833.8118617920445 658.4438256987662 682.241247300056 733.9430009150046 982.1144092290343 922.5820855398072 786.1835630013617 0.9862180171556527 1.3514809901498719 1.0826529622698404 1.1405800883030475 1.0605816517059392 0.8375191961341295 0.8677887447754671 0.9335516989353967 1.2492176833100914 1.1734944979232658 1.0 9.618722390951747 -6.71477985387375 4.768196691300659 1.0619345084329515 1.1529636837155763 0.09519000723715187 0.14399623526204536 0.5106084158506466 25.157849105431705 0.023919629698196693 0.04998643734300035 1.9285022332539332e-07 6.71477985387375 0.09102917528262489 GNDPLTSS(ph)PGR ddPTM_A549_MK2206_60min_R1 4 GNDPLTSSPGR 11 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 GNDPLTS(0.005)S(0.994)PGR;GNDPLTS(0.112)S(0.887)PGR;GNDPLT(0.02)S(0.057)S(0.923)PGR;GNDPLTS(0.004)S(0.996)PGR 179.67 5.3569e-16 2169190000.0 14346.7 15664.400000000001 14370.8 14178.400000000001 18469.6 15006.900000000001 13757.8 14579.399999999998 20568.0 21199.0 21369.1 True False 16768.07221686124 16461.651051938003 16408.79553210009 17652.108636492558 15752.746306531177 16594.920197225994 16257.414176152306 16646.074597539926 15909.380840346807 16410.131176655086 16062.562712842975 1.0439225991911096 1.0248458696305 1.0215552664569698 1.0989596711350826 0.9807118943688804 1.0331427490058835 1.0121307830383464 1.036327446319036 0.9904634226035618 1.021638419100721 1.0 13.971414466561393 -8.0845076991637 0.7055095741569956 0.9952566953699482 1.0381546715518766 0.1156356029087422 0.028324704861914945 0.5779182580842415 0.5856944930349187 0.005895062109859508 0.009025986712669694 8.231752435581463e-09 8.0845076991637 0.042897976181928366 GNDPLTSS(ph)PGR ddPTM_A549_PD325901_60min_R1 4 GNDPLTSSPGR 11 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 GNDPLTS(0.01)S(0.99)PGR;GNDPLTS(0.021)S(0.979)PGR;GNDPLTS(0.003)S(0.997)PGR;GNDPLTS(0.006)S(0.994)PGR 159.77 2.4119e-13 2584150000.0 42002.6 38755.7 39043.7 39796.7 46627.0 42578.8 41231.8 44174.1 42473.0 45166.8 50205.8 True False 46266.67303132016 42021.778852140975 41693.440270841114 42254.85177413663 43352.08037441757 42232.05236975615 42800.8987119067 43293.01292158895 40688.007513836135 42314.96053978569 44030.80488078816 1.0507796338628272 0.9543722620086881 0.9469152422656053 0.9596656679009195 0.9845852350823882 0.9591478621410154 0.9720671431691658 0.9832437321734918 0.9240804846515405 0.9610308204529066 1.0 15.426225596454467 -5.257353365459264 24.679478571791705 0.9643603907986085 1.0507796746394191 0.6179914493662464 0.019498402841673545 236.18743578959882 1426500.77371954 0.0036729362518472075 0.03903236211414928 5.529000567827776e-06 5.257353365459264 0.08641928384081066 GNDS(ph)DGEGESDDPEK ddPTM_A549_MK2206_60min_R1 2 GNDSDGEGESDDPEK 15 0 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(0.996)DGEGES(0.004)DDPEK;GNDS(1)DGEGESDDPEK 150.76 4.9087e-14 16249900.0 3815.9 3828.2 3580.4 3592.8999999999996 3136.3999999999996 832.27 583.53 610.03 1523.81 4062.1000000000004 3659.1 True False 4459.93063020212 4023.039028435755 4088.15455807131 4473.160661291411 2675.039714763955 920.3402589838859 689.5498476653353 696.5036206385231 1178.6694680245466 3144.468788749026 2750.444483977506 1.6215308675318074 1.4626868682031746 1.4863614160862098 1.6263410104619271 0.9725845151018988 0.33461510106648373 0.2507048775869692 0.2532331136643365 0.4285378144844556 1.1432584104376136 1.0 11.425449068031204 -6.92655395366479 3.896473830804281 0.6196589576390927 1.5358299650661924 0.731220941650407 0.276234641762676 0.1064520612218736 3.211460291601722 0.04583941605955715 0.08900438790441645 1.1842572341423988e-07 6.92655395366479 0.9161710074270997 GNDS(ph)DGEGESDDPEK ddPTM_A549_PD325901_60min_R1 3 GNDSDGEGESDDPEK 15 0 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(0.85)DGEGES(0.15)DDPEK;GNDS(1)DGEGESDDPEK;GNDS(0.999)DGEGES(0.001)DDPEK 144.73 1.4058e-13 35623570.0 2931.8 3132.8 3066.19 3699.1499999999996 3702.3199999999997 2681.87 2985.5 2629.5299999999997 3487.1800000000003 3069.03 3062.61 True False 3229.4341777229142 3396.8120505625575 3274.2800918983157 3927.638094120805 3442.28181551062 2660.0297398911644 3099.1148362282865 2577.0819613236204 3340.62595159511 2875.250922036062 2685.9283854843584 1.2023530467810832 1.2646696274256783 1.2190496625277143 1.4623018675207629 1.2815985095186622 0.9903576559475082 1.1538337555747666 0.9594753066578469 1.2437509390231523 1.0704868147545799 1.0 11.391205123573409 -7.190593115443559 9.283525335057476 1.1002825721802634 1.2912689136215714 0.5268706876763134 0.09975580499783925 0.3722898827478961 46.80488427834895 0.017005994248518133 0.029482194640624654 6.44773061684104e-08 7.190593115443559 0.190986341441308 GNDS(ph)DGEGESDDPEKKK ddPTM_A549_MK2206_60min_R1 4 GNDSDGEGESDDPEKKK 17 2 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK 179.5 2.2635e-31 75329900.0 17091.2 18295.8 18826.0 17935.6 15137.9 6484.69 5247.59 5093.530000000001 11787.6 23328.9 23409.800000000003 True False 19975.77672027845 19226.978072319864 21495.809884440416 22329.82280515968 12911.134963054865 7170.895591611156 6201.009177094817 5815.553475781414 9117.727420929208 18058.885287375288 17596.500582388206 1.1352130286786446 1.092659189950731 1.2215957248883285 1.2689922465327517 0.7337331023633882 0.4075182766048543 0.35240013479164234 0.3304948872392288 0.5181557195556746 1.0262770829246508 1.0 14.103000928047916 -6.815462884055295 6.226507113044164 0.6694367371327872 1.1760971882188989 0.5775792503471637 0.22668173460103924 0.14450719422744893 11.91356703690948 0.03992947622043422 0.07671035943776462 1.5294564521905652e-07 6.815462884055295 0.5066604510861117 GNDS(ph)DGEGESDDPEKKK ddPTM_A549_PD325901_60min_R1 7 GNDSDGEGESDDPEKKK 17 2 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(0.999)DGEGES(0.001)DDPEKKK;GNDS(1)DGEGESDDPEKKK 150.09 2.3118000000000003e-17 176851100.0 25904.1 27041.7 27655.0 27603.000000000004 31618.199999999997 29899.700000000004 30148.3 30701.100000000002 29374.400000000005 30131.9 31335.0 True False 28533.865162409485 29320.59896185442 29531.83460302458 29307.97461903858 29397.44670886844 29656.206756413943 31295.61005428279 30088.742475952986 28139.89612022762 28229.36669165776 27480.99364893096 1.0383127163060017 1.0669410042600487 1.074627612825543 1.0664816197495353 1.06973740048923 1.0791533645133535 1.1388092604686522 1.0948928142968903 1.023976661095815 1.027232386582787 1.0 14.746146549151902 -8.876583640668148 4.496818810791268 1.01028442439133 1.079324870925354 0.565200919640426 0.02402202175607473 0.10674814110704617 3.6221987813168703 0.004554685407140126 0.004810718362266656 1.3286676447073634e-09 8.876583640668148 0.06904044653402397 GNDSDGEGES(ph)DDPEK ddPTM_A549_MK2206_60min_R1 1 GNDSDGEGESDDPEK 15 0 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(0.465)DGEGES(0.535)DDPEK 48.14 0.027585000000000002 422130.0 172.64 272.27 291.79 175.48 276.29 215.78 180.04 139.55 227.75 396.29 379.53 True False 201.77741135724054 286.1273800408032 333.17020961334725 218.47260787759654 235.64810699914977 238.61369637682844 212.75093752449231 159.33163985395126 176.16498864201594 306.7678137646419 285.28222650487373 0.707290509574712 1.0029625173158658 1.167861782681563 0.7658121943109 0.8260174841110334 0.8364127667545107 0.7457560189816371 0.5585053152662115 0.6175112652487882 1.0753134449453727 1.0 8.156246057507467 -6.370328090120548 19.368401590129668 0.7906988117840403 0.9644625263738698 0.13819347672632143 0.17154304528417819 6.78508349182867 1193.2351599813537 0.025818808164819608 0.05999759471541287 4.2625737868830863e-07 6.370328090120548 0.17376371458982942 GNDT(ph)PLALESTNTEK ddPTM_A549_MK2206_60min_R1 2 GNDTPLALESTNTEK 15 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GNDT(0.999)PLALESTNTEK;GNDT(0.997)PLALES(0.003)TNTEK 151.48 4.0433e-14 18971900.0 3869.7000000000003 4242.9 4411.0 3949.1 7426.8 5250.9 4398.7 5147.1 7186.5 6366.9 7089.8 True False 4522.810754918409 4458.845487108842 5036.546127709908 4916.629677281837 6334.32755822247 5806.546752734675 5197.886852304954 5876.717187332656 5558.769224482317 4928.6128679959065 5329.206991474335 0.8486836338228185 0.8366808596930279 0.9450835998240216 0.9225818560148744 1.1886060286935987 1.0895705049595537 0.975358408975394 1.1027376487222635 1.0430762463111747 0.9248304439817595 1.0 12.37970515449751 -6.204398258758734 1.9092283130829872 1.0376123431859805 0.8486718606287044 0.516592983252794 0.07245909636105245 0.1909689664465993 1.3214051814448744 0.009356975230242327 0.03308458012181609 6.245996567707509e-07 6.204398258758734 -0.18894048255727613 GNDT(ph)PLALESTNTEK ddPTM_A549_PD325901_60min_R1 2 GNDTPLALESTNTEK 15 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GNDT(1)PLALESTNTEK;GNDT(1)PLALESTNTEK 219.03 4.7985999999999995e-46 20970000.0 7616.5 7110.299999999999 8167.299999999999 8523.7 9741.8 8086.299999999999 9032.8 8576.9 8404.2 9344.5 9976.9 True False 8389.721473029043 7709.509934600021 8721.582091964652 9050.18959027277 9057.569575385527 8020.447853804223 9376.548146937821 8405.827001052117 8051.000700392756 8754.486675257654 8749.804548779934 0.9588467292333861 0.8811065311938915 0.9967745043151602 1.034330485877507 1.0351739315878214 0.9166430871787403 1.07162943979649 0.9606874021230817 0.9201349190726074 1.0005351121218329 1.0 13.095035075360737 -5.773602355703704 24.976326791855794 0.9771101582629687 0.9199766190750872 0.19170789754787254 0.04975645244390436 274.87832389095917 564458.8038159914 0.007306176446738819 0.022963869387064788 1.684215439522675e-06 5.773602355703704 -0.057133539187881444 GNDT(ph)PLALESTNTEKETSLEETK ddPTM_A549_MK2206_60min_R1 2 GNDTPLALESTNTEKETSLEETK 23 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GNDT(1)PLALESTNTEKETSLEETK;GNDT(0.999)PLALES(0.001)TNTEKETSLEETK 199.8 4.0619999999999994e-61 44799000.0 12446.099999999999 13836.4 15776.099999999999 14139.3 21033.0 16142.7 15435.599999999999 16488.8 22258.0 23652.0 21898.0 True False 14546.69740206993 14540.61365995729 18013.38820343783 17603.429134737304 17939.073562246616 17850.90979934298 18240.04871835733 18826.13789483217 17216.598538722243 18308.99677297259 16460.12224594558 0.8837539104943793 0.8833843055776152 1.0943653962153803 1.069459197915334 1.08985056697652 1.084494363566466 1.1081356775980313 1.1437422890020992 1.0459581211775628 1.1123244711917266 1.0 14.00668742994839 -5.752425299783045 24.999825057210913 1.0515511793886207 0.8835690005283563 0.7114681377286836 0.04551636469424517 97.12272241735585 269355.93324499286 0.00737566980215448 0.027748586173396837 1.768376358687365e-06 5.752425299783045 -0.16798217886026445 GNDT(ph)PLALESTNTEKETSLEETK ddPTM_A549_PD325901_60min_R1 2 GNDTPLALESTNTEKETSLEETK 23 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GNDT(1)PLALESTNTEKETSLEETK;GNDT(0.999)PLALES(0.001)TNTEKETSLEETK 186.17 4.036e-50 116884000.0 12134.8 12069.2 13450.8 12581.0 15276.7 13799.2 16476.9 15364.099999999999 14310.599999999999 16044.3 16541.7 True False 13366.71596283238 13086.31384086109 14363.652174231165 13358.099796475908 14203.717293753933 13686.823890310174 17103.937446005642 15057.650972596719 13709.175248452033 15031.260159862626 14507.175766475857 0.9213865040307206 0.9020579919560782 0.9901067172167063 0.9207925795829047 0.9790821812869204 0.9434519930432355 1.178998429558602 1.0379450290657495 0.9449927035510318 1.0361258732797503 1.0 13.824479064751271 -7.012486193958683 2.2409309526562993 0.9938172085866028 0.935322157901616 0.22813839115928924 0.0657866789550913 0.5151491703619672 5.160758435276943 0.010535707885665687 0.021074877899905666 9.716588397173512e-08 7.012486193958683 -0.05849505068498684 GNEEKPAS(ph)PSAAVPPGTDHDPHGLVVK ddPTM_A549_MK2206_60min_R1 1 GNEEKPASPSAAVPPGTDHDPHGLVVK 27 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 GNEEKPAS(0.77)PS(0.23)AAVPPGT(0.001)DHDPHGLVVK 48.831 0.039843 6437600.0 1081.4 1193.2 1101.9 948.07 1519.8 1415.6 915.28 1099.7 1338.0 1662.5 1581.0 True False 1263.9138823083874 1253.9287834307352 1258.1659891461231 1180.3471925604797 1296.2394332668866 1565.39785240077 1081.5745284237803 1255.5858426900043 1034.945136346948 1286.9400953436045 1188.39406661978 1.0635477892475624 1.055145610914534 1.0587110996984355 0.9932287830397971 1.0907488262322427 1.3172380242972135 0.9101143793995599 1.056539979420582 0.870877064617719 1.0829236963494144 1.0 10.214797591919115 GNETGLIT(ph)PNKHGLLQNPYR ddPTM_A549_MK2206_60min_R1 2 GNETGLITPNKHGLLQNPYR 20 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 GNET(0.003)GLIT(0.997)PNKHGLLQNPYR;GNET(0.016)GLIT(0.984)PNKHGLLQNPYR 71.05199999999999 0.00044218 8600800.0 1789.17 2586.45 2137.61 2461.8999999999996 3139.6 2315.2200000000003 2577.2799999999997 2297.29 3221.5 2766.2 3246.8 True False 2091.138154993246 2718.0892573788346 2440.755241000674 3065.0656105188896 2677.768999002972 2560.215043681345 3045.5384151473186 2622.937892655563 2491.835393678396 2141.313498790663 2440.529952878622 0.8568377341678327 1.1137291120614312 1.0000923111481528 1.2559016564839218 1.0972080042879724 1.04904061540468 1.247900445374614 1.074741119059731 1.0210222540965985 0.8773969343277137 1.0 11.252978742849029 -8.741543278602565 4.1743933307176935 1.0094058460249402 1.0957463264536689 0.16122136711381663 0.110876536523164 0.31908884546412136 12.43045018249318 0.017096852524253713 0.018854855435790872 1.8132459720735244e-09 8.741543278602565 0.08634048042872866 GNFNST(ph)VNNTVTVR ddPTM_A549_MK2206_60min_R1 2 GNFNSTVNNTVTVR 14 0 Q96BY6;A0A2R8YD85;Q96BY6-3;Q96BY6-2 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 GNFNS(0.062)T(0.933)VNNT(0.004)VTVR;GNFNS(0.022)T(0.978)VNNTVTVR 222.88 7.3141e-47 36827000.0 10991.3 15894.8 10713.6 14374.8 17452.8 12671.0 12490.900000000001 12414.7 25541.0 19075.1 19610.6 True False 12846.362728515058 16703.77742782002 12232.949579195843 17896.626645309287 14885.516239584353 14011.836809670924 14760.334845171525 14174.521743424206 19756.004280595953 14766.0216617677 14740.746794973975 0.8714865608366037 1.1331703651212137 0.8298731230745248 1.2140922637251557 1.0098210386911834 0.9505513529645878 1.0013288370304434 0.9615877635356419 1.340230895719068 1.001714625937564 1.0 13.847521995577651 -8.714093372248646 24.999934764116617 1.1606651452711727 1.0018189463659863 0.10622403293531457 0.13365453176403158 144.16943548409822 76125.01132070448 0.025073878883921773 0.02843106588334543 1.9315529932146752e-09 8.714093372248646 -0.15884619890518636 GNFNST(ph)VNNTVTVR ddPTM_A549_PD325901_60min_R1 2 GNFNSTVNNTVTVR 14 0 Q96BY6;A0A2R8YD85;Q96BY6-3;Q96BY6-2 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 GNFNS(0.293)T(0.7)VNNT(0.006)VT(0.001)VR;GNFNS(0.045)T(0.947)VNNT(0.007)VTVR 110.32 1.2085e-05 66333000.0 16061.0 18388.3 15486.7 18765.7 21024.5 18593.6 18688.3 19327.2 24016.1 20762.8 20761.8 True False 17691.50089651671 19937.946574744466 16537.720591092417 19924.814669003106 19547.811650587475 18442.179886288424 19399.493483130158 18941.703834104916 23006.786835237435 19451.833264598386 18208.230219893878 0.9716211121489116 1.0949964018447407 0.9082552445445081 1.0942751946992482 1.0735701061836314 1.012848567025418 1.0654244398741584 1.0402825318744962 1.2635377824968825 1.0682989521598742 1.0 14.152303083464286 -8.568298329634832 24.999311545707805 1.1258937822099049 1.0340219640365127 0.15580958450460114 0.0787228922449143 183.55951709569868 101031.89451707836 0.0173706100257026 0.01969642341865044 2.7021015735083953e-09 8.568298329634832 -0.09187181817339218 GNFNYIEFTR ddPTM_A549_MK2206_60min_R1 1 GNFNYIEFTR 10 0 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 0 63.216 0.018419 1958000.0 1361.2 1474.8 1027.7 1327.7 1800.6 1166.7 1488.5 1262.9 1783.9 1960.8 2062.2 False True 1590.9372818551658 1549.8610206198873 1173.4433134090843 1652.9865596027184 1535.7341252403958 1290.159419607219 1758.9411825439174 1441.9199424690435 1379.84949830293 1517.8539181652573 1550.0988261754019 1.0263457109896184 0.9998465868424007 0.7570119360094936 1.0663749508676 0.9907330418600158 0.8323078489069384 1.134728413983641 0.9302116214272151 0.8901687266659427 0.9791981598426835 1.0 10.598144481766836 -5.539067874203468 24.938252418957298 0.9494896051401736 1.019721199744617 0.05268799250474898 0.09900607335308842 419.66141268120725 646460.2205469975 0.012770436884385401 0.04948767386301563 2.890228144497282e-06 5.539067874203468 0.07023159460444339 GNFNYIEFTR ddPTM_A549_PD325901_60min_R1 1 GNFNYIEFTR 10 0 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 0 126.71 0.00016048 2344200.0 3008.8 3044.0 3561.9 3125.2 3100.9 2883.8 3436.3 3870.9 3027.5 3582.4 3680.7 False True 3314.251161038508 3300.5285629189293 3803.6319534447025 3318.2365061558307 2883.103481524253 2860.315288920842 3567.0702769155114 3793.691862837696 2900.264703414848 3356.20665262379 3227.9972338796897 1.0267205703442164 1.02246945204227 1.1783256545338376 1.0279551888486855 0.8931554994113445 0.8860959541415295 1.1050413053261183 1.1752463177541528 0.8984718676258145 1.0397179456656496 1.0 11.656423627010815 -6.525837175676111 24.92999868701812 0.9710852762596592 1.0759414470851356 0.06119902183307502 0.09511040003822718 111.78843789922425 942015.0461154142 0.014236322884447743 0.029760492601039152 2.979633334819488e-07 6.525837175676111 0.10485617082547638 GNGS(ph)GGSRENS(ph)TVDFSK ddPTM_A549_PD325901_60min_R1 1 GNGSGGSRENSTVDFSK 17 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 2 GNGS(0.555)GGS(0.524)RENS(0.795)T(0.124)VDFS(0.001)K 48.983999999999995 0.0062821000000000005 11011000.0 4047.0 4396.2 3916.5 4722.8 5149.2 4229.5 4505.2 5296.8 4559.4 4789.1 5057.8 True False 4457.848460756066 4766.683202465239 4182.297241827727 5014.516629742981 4787.537955775643 4195.056354286254 4676.647851340034 5191.1511687407865 4367.7842737406 4486.715408687083 4435.722664035835 1.0049880928985087 1.0746125408409282 0.9428671624890251 1.1304847055475131 1.0793140866520519 0.945743607529644 1.054314754449728 1.1703056214108811 0.9846838056747621 1.0114959271607962 1.0 12.11495345094439 GNGS(ph)GGSRENSTVDFSK ddPTM_A549_PD325901_60min_R1 1 GNGSGGSRENSTVDFSK 17 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 GNGS(0.694)GGS(0.304)RENS(0.002)TVDFSK 92.95 1.2435e-06 286850000.0 7909.5 7731.6 8303.2 8165.6 9458.5 7492.2 8657.9 7661.3 8632.0 8620.0 8656.5 True False 8712.466617333848 8383.169066052566 8866.705083197741 8669.970566576882 8794.16759005358 7431.186007230995 8987.381122284673 7508.489361326416 8269.22705858859 8075.731728901598 7591.805378074698 1.1476145901336783 1.104239195891842 1.167931031109541 1.142016968930203 1.1583763218497842 0.978843060004202 1.1838265965353154 0.9890255331111489 1.0892306436714385 1.0637432503505018 1.0 12.890227292868651 -14.999999964717535 0.04749423983588581 0.513493857321712 1.3604863664068676 0.2819966042457118 0.061002454374632226 295.53165296167816 1.0731428899146167 18.80540363485427 4.73748285531119 1.0000000812408812e-15 14.999999964717535 0.8469925090851556 GNGS(ph)SQPGTAR ddPTM_A549_MK2206_60min_R1 2 GNGSSQPGTAR 11 0 Q9UL25 Q9UL25 RAB21 Ras-related protein Rab-21 1 GNGS(0.5)S(0.5)QPGTAR;GNGS(0.5)S(0.5)QPGTAR 59.542 0.0092789 7854600.0 717.48 493.71 470.03 399.04 486.92999999999995 462.28000000000003 485.53999999999996 311.98 615.76 831.1 877.3499999999999 True False 838.5730832981524 518.8377301940901 536.6873217881401 496.8048179135863 415.3032420322705 511.19816276337144 573.7563330684405 356.20412039867927 476.291343166664 643.3539327759821 659.4797813718305 1.2715675400294717 0.7867378877254114 0.8138040573006482 0.7533283535700631 0.629743706726488 0.7751536547488871 0.8700135307786532 0.5401289477862594 0.7222228135271966 0.9755476224573498 1.0 9.365184619135196 -5.259575665489062 24.31711348157437 0.810764266092657 1.2715677690762943 0.5285527998806689 0.12985278929806418 80.52983324686296 1050598.1682436347 0.020396933553721398 0.18182955393048464 5.500780741339768e-06 5.259575665489062 0.46080350298363737 GNGSGGS(ph)RENSTVDFSK ddPTM_A549_MK2206_60min_R1 4 GNGSGGSRENSTVDFSK 17 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 GNGS(0.003)GGS(0.997)RENSTVDFSK;GNGS(0.068)GGS(0.931)RENS(0.001)TVDFSK;GNGS(0.002)GGS(0.998)RENSTVDFSK;GNGS(0.002)GGS(0.997)RENS(0.001)TVDFSK 190.23 1.0490999999999998e-39 493857000.0 59285.200000000004 65047.799999999996 63592.6 56305.6 82939.40000000001 62214.8 60607.899999999994 64031.6 89623.5 90213.90000000001 90659.9 True False 69291.0923760212 68358.4551783823 72610.9869147597 70100.47452765431 70739.12412915888 68798.32884115807 71619.57090863505 73108.27538855071 69323.92034932038 69834.5173337253 68146.54474404975 1.016795387591113 1.0031096284504 1.0655123775897644 1.0286724703496455 1.03804417956694 1.0095644481984574 1.0509640830306155 1.072809717105051 1.0172771137508543 1.0247697457885119 1.0 16.05635288900844 -8.979857538242799 13.560855096281449 1.007615557940762 1.035698912495703 0.16571290676417116 0.021338486650047103 0.9301814435514968 624.721298189477 0.0037310260043115504 0.003837148108904337 1.0474720943056913e-09 8.979857538242799 0.028083354554941042 GNGSGGS(ph)RENSTVDFSK ddPTM_A549_PD325901_60min_R1 6 GNGSGGSRENSTVDFSK 17 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 GNGS(0.002)GGS(0.647)RENS(0.331)T(0.02)VDFSK;GNGS(0.02)GGS(0.979)RENS(0.001)TVDFSK;GNGS(0.013)GGS(0.987)RENSTVDFSK;GNGS(0.042)GGS(0.953)RENS(0.002)T(0.002)VDFSK;GNGS(0.065)GGS(0.935)RENSTVDFSK;GNGS(0.116)GGS(0.884)RENSTVDFSK 203.56 1.453e-48 217243100.0 46837.5 47520.5 49825.5 50538.8 61355.600000000006 54629.700000000004 51934.600000000006 56457.200000000004 55718.200000000004 55977.4 66331.3 True False 51592.4085200549 51525.21930820926 53206.95805507142 53660.46689405747 57046.194321329174 54184.81383561932 53910.999622703595 55331.116856183406 53376.55781925984 52442.97741083715 58172.97060875487 0.8868793871133407 0.8857243968980821 0.9146336777765295 0.9224295464461243 0.9806305870985361 0.9314431301788233 0.9267362326274282 0.9511482098501641 0.9175491170675547 0.9015007633621623 1.0 15.828061356967723 GNIETTS(ph)EDGQVFS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 GNIET(0.041)T(0.175)S(0.796)EDGQVFS(0.988)PK 42.913000000000004 0.035261 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GNIETTS(ph)EDGQVFS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 GNIET(0.022)T(0.111)S(0.868)EDGQVFS(1)PK;GNIET(0.011)T(0.097)S(0.892)EDGQVFS(1)PK 100.35 1.5081e-06 9453500.0 3810.2 3838.1000000000004 3624.0 3643.6 4177.9 4182.1 3816.7 4626.2 3958.7000000000003 3896.6 4495.9 True False 4197.008699079011 4161.55015681312 3869.946432882337 3868.656896784008 3884.4587169725482 4148.042364170836 3961.9466070783797 4533.92681181631 3792.329605750078 3650.5680110020858 3942.9328018582596 1.064438302651521 1.055445366670167 0.9814893195893358 0.9811622696082353 0.9851699007251269 1.0520195429696164 1.0048222493701031 1.1498869089728136 0.961804270152105 0.925850932402808 1.0 11.945053407927508 GNIETTS(ph)EDGQVFSPK ddPTM_A549_MK2206_60min_R1 1 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIET(0.008)T(0.016)S(0.977)EDGQVFSPK 96.993 4.3609e-06 6815100.0 1444.3 1693.6 1583.7 1602.6 2133.9 1508.7 1579.4 1312.4 2558.3 2358.3 2514.1 True False 1688.0625302552273 1779.7970060495252 1808.2924739184266 1995.237071943447 1820.0061367602361 1668.3496326059924 1866.3565359152599 1498.4367190564353 1978.8491347656175 1825.5583920895178 1889.7795843698868 0.8932589515819548 0.9418013723769625 0.9568800980149065 1.0558041204623994 0.9630785260954571 0.8828276304838343 0.9876054071869779 0.7929161323626333 1.0471322428988084 0.9660165699685117 1.0 10.884002259277532 GNIETTS(ph)EDGQVFSPK ddPTM_A549_PD325901_60min_R1 1 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIET(0.016)T(0.109)S(0.872)EDGQVFS(0.003)PK 54.281000000000006 0.014249000000000001 6464900.0 2617.1 2127.6 2646.2 2687.7 2803.1 2800.6 2832.3 3315.1 3192.0 3031.0 3318.8 True False 2882.7860653928074 2306.9003188128486 2825.787044893278 2853.7131247904213 2606.2199261700257 2777.792842135969 2940.0847263940304 3248.977729854359 3057.8513404790065 2839.622142726302 2910.6086396065757 0.9904409772460756 0.7925834780469387 0.9708577808919159 0.9804523651713462 0.8954209407288457 0.9543683765438972 1.0101271213128258 1.1162537228960883 1.0505882855114226 0.9756111158627397 1.0 11.50710515240993 -7.720738128484002 3.224705405573536 1.032582201797759 0.9243381558400728 0.4134271443308347 0.06014284289003185 0.1767726879520898 3.7863210161199223 0.009029486086073232 0.01342962033287301 1.9022249405320178e-08 7.720738128484002 -0.10824404595768622 GNIETTSEDGQVFS(ph)PK ddPTM_A549_MK2206_60min_R1 3 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK 180.81 4.2261e-30 69489400.0 7672.9 7646.200000000001 7074.5 6474.4 10628.0 8182.700000000001 7457.0 7569.6 11195.3 10386.6 11759.0 True False 8967.897935605719 8035.3589204392365 8077.770478459251 8060.62829064686 9064.635278826467 9048.587882763342 8811.840375028542 8642.613980927767 8659.582425220464 8040.25984619301 8838.915768110057 1.0145925327132335 0.9090887537847148 0.9138870298552969 0.9119476304694313 1.025537013434474 1.0237214744606755 0.9969367970244495 0.9777911915519629 0.9797109342826176 0.9096432251568095 1.0 13.109653695918533 -6.755967727784799 24.99993301932779 0.9943308793678293 0.9336802560607834 0.2565030947671818 0.03994483321198547 90.77902847554304 414764.3603139545 0.004308688467278647 0.008773981740063936 1.7540108367053683e-07 6.755967727784799 -0.06065062330704585 GNIETTSEDGQVFS(ph)PK ddPTM_A549_PD325901_60min_R1 4 GNIETTSEDGQVFSPK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK 263.49 3.2433e-91 225875000.0 22035.300000000003 23508.6 22746.899999999998 23087.2 26175.3 23513.2 25631.8 24613.8 24351.500000000004 26500.9 27265.5 True False 24272.3074344695 25489.752225438857 24290.64142222165 24513.243909164496 24336.83722788281 23321.71629497662 26607.232175259145 24122.85844984744 23328.09113962237 24827.6286513281 23912.016350245 1.0150673652504763 1.0659808797419834 1.0158340922166846 1.025143323344764 1.0177659997975643 0.9753136646185702 1.11271386676626 1.0088174119871025 0.9755802604820213 1.0382908863757832 1.0 14.54544816814553 -8.52019821813826 24.92828323170106 0.9886647885640308 1.0323223847098935 0.070005685009773 0.036233017424675225 101.21716467517027 941305.8077453554 0.0053231877049034915 0.006087498469465914 3.018573686264993e-09 8.52019821813826 0.04365759614586262 GNIETTSEDGQVFS(ph)PKK ddPTM_A549_MK2206_60min_R1 4 GNIETTSEDGQVFSPKK 17 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTS(0.002)EDGQVFS(0.998)PKK;GNIETTS(0.001)EDGQVFS(0.999)PKK;GNIETTSEDGQVFS(1)PKK;GNIETTSEDGQVFS(1)PKK 108.96 3.1377e-09 55796500.0 13664.7 16456.3 16279.5 14062.199999999999 20107.1 16688.9 15494.4 15269.4 23416.800000000003 22426.799999999996 24293.299999999996 True False 15970.967290160357 17293.855379459616 18588.177893006894 17507.439631276146 17149.37222571431 18454.908320804756 18309.531917237797 17433.8842105763 18112.93218894559 17360.570303910936 18260.603149028662 0.8746133498339512 0.9470582783230536 1.0179388786506571 0.9587547294245546 0.9391459901819583 1.0106406765532512 1.0026794716368248 0.954726635713764 0.9919131389649127 0.950711767964488 1.0 14.156446797979015 -5.387196732318891 2.9310648980953653 0.9895164353389775 0.868912029680771 0.551580955575506 0.026833791810170593 0.138772612356867 1.8754728321823286 0.0033207843488382237 0.033308151354342376 4.100183255195527e-06 5.387196732318891 -0.12060440565820651 GNIETTSEDGQVFS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 GNIETTSEDGQVFSPKK 17 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTSEDGQVFS(1)PKK;GNIETTSEDGQVFS(1)PKK 170.5 3.448399999999999e-30 98967000.0 18256.3 17332.0 18136.6 18056.300000000003 21253.8 21344.0 20930.0 22220.0 19230.6 20189.3 22083.0 True False 20109.66613642227 18792.6284666593 19367.4587402356 19171.596642167384 19761.006409629525 21170.181540580645 21726.50260333547 21776.804668747205 18422.404758212917 18914.54415247251 19366.93099567071 1.0383506886515779 0.9703462293979468 1.0000272497777272 0.9899140264636151 1.0203478503665298 1.0931097728036019 1.1218350810560649 1.1244323983813025 0.9512299477047275 0.9766412735554576 1.0 14.241307733174494 -8.80656546551058 24.999897930379436 0.9769696880382454 1.042356001575486 0.2755411873598975 0.04958939050052782 143.98381733526475 79766.44572099674 0.009854351888995585 0.01049077259393369 1.5611136980961139e-09 8.80656546551058 0.06538631353724067 GNIWS(ph)AEK ddPTM_A549_MK2206_60min_R1 2 GNIWSAEK 8 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 GNIWS(1)AEK;GNIWS(1)AEK 107.83 0.0017976 33189000.0 4249.8 3583.0 3028.2 2598.3999999999996 4834.7 3809.4 4158.299999999999 4158.3 5494.3 5029.1 5599.0 True False 4967.062342365625 3765.3593957696316 3457.64429470214 3235.0081166466066 4123.522034488363 4212.508179524933 4913.809284092957 4747.751759259661 4249.849822594198 3893.022817138359 4208.613775461194 1.180213392667831 0.8946792451528797 0.82156369749639 0.7686635764746799 0.9797815277160932 1.0009253412813612 1.1675600438185814 1.1281034593722934 1.0097980117285732 0.9250130862178602 1.0 12.039129404273737 -6.99166452023169 24.982604131820494 1.026850027677886 0.9037529772201066 0.19380794858976325 0.11426565185634352 238.8153213588457 715756.7139603222 0.0161278289419848 0.03044480359368936 1.019378524051036e-07 6.99166452023169 -0.12309705045777941 GNIWS(ph)AEK ddPTM_A549_PD325901_60min_R1 4 GNIWSAEK 8 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 GNIWS(1)AEK;GNIWS(1)AEK;GNIWS(1)AEK;GNIWS(1)AEK 96.229 0.0024901 43327800.0 19345.0 14738.1 14373.699999999999 14495.199999999999 13520.099999999999 14645.0 12286.2 13910.9 19581.3 17570.5 19943.899999999998 True False 21308.89015896368 15980.13141036645 15349.185718079709 15390.535583012283 12570.494817812922 14525.735975534282 12753.758064266605 13633.436186610072 18758.366056805004 16461.095631399705 17490.92673479858 1.2182825119591394 0.9136240550692851 0.8775513127924873 0.8799153879246705 0.7186866086862995 0.8304726327985248 0.7291642265525431 0.7794576235623956 1.0724626740037064 0.9411219817558321 1.0 14.094319110219992 -8.769971015042367 24.986718911875187 1.034218493704144 0.859695908173148 0.16532371402142143 0.1306400643922799 178.43165466273155 522573.72283598094 0.02244224657482382 0.024076981250178382 1.6983569975881535e-09 8.769971015042367 -0.1745225855309961 GNKEFGDQAEAAQDATLTTTTFQNEDEKNKEVYMT(ph)PLR ddPTM_A549_MK2206_60min_R1 3 GNKEFGDQAEAAQDATLTTTTFQNEDEKNKEVYMTPLR 38 3 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 GNKEFGDQAEAAQDAT(0.047)LT(0.038)T(0.227)T(0.038)T(0.052)FQNEDEKNKEVY(0.29)MT(0.309)PLR;GNKEFGDQAEAAQDAT(0.067)LT(0.073)T(0.066)T(0.066)T(0.093)FQNEDEKNKEVY(0.306)MT(0.328)PLR;GNKEFGDQAEAAQDAT(0.007)LT(0.031)T(0.062)T(0.062)T(0.062)FQNEDEKNKEVY(0.174)MT(0.603)PLR 67.209 8.3758e-05 24963700.0 2358.47 2836.43 2387.47 2592.46 3634.2599999999998 2901.63 2308.45 2411.69 3977.6000000000004 3965.9 4506.2 True False 2756.522076944574 2980.7921716279257 2726.049146117338 3227.612816379952 3099.6651682751117 3208.6785606538924 2727.865483939204 2753.5544429908678 3076.679950921988 3070.000435562827 3387.1861752068644 0.8138088473321742 0.8800201752848382 0.804812314738162 0.9528891089616098 0.9151150860745961 0.9472991429111304 0.80534855270322 0.81293271186155 0.9083291533965024 0.9063571580547485 1.0 11.725871570775517 -9.897885305763358 0.8434554995155535 0.990774576813574 0.8712703113321698 0.17884015742395132 0.059025436229974165 0.3809820310197412 0.5567444224407085 0.022126651384778217 0.011334461116723035 1.265070399898876e-10 9.897885305763358 -0.11950426548140414 GNKHDDGTQS(ph)DSENAGAHR ddPTM_A549_MK2206_60min_R1 5 GNKHDDGTQSDSENAGAHR 19 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGT(0.104)QS(0.868)DS(0.028)ENAGAHR;GNKHDDGT(0.012)QS(0.868)DS(0.119)ENAGAHR;GNKHDDGT(0.094)QS(0.844)DS(0.061)ENAGAHR;GNKHDDGT(0.033)QS(0.901)DS(0.066)ENAGAHR;GNKHDDGT(0.445)QS(0.549)DS(0.006)ENAGAHR 113.26 2.9751e-10 289475200.0 895.3 803.03 764.22 601.33 835.0999999999999 759.4209999999999 599.4300000000001 756.74 1317.8 1373.6999999999998 1553.64 True False 1046.404752016552 843.9007969815481 872.5978874900175 748.6558769947296 712.2578962502805 839.7824261571383 708.338671852402 864.0102124190544 1019.3204040941763 1063.3802159239153 1167.8283097173667 0.8960261909302395 0.7226240278297292 0.747197066751362 0.6410667310984407 0.6098994949203265 0.719097507030275 0.6065435012650373 0.739843524283256 0.8728341277673499 0.910562115231879 1.0 10.189612474182919 -9.008083284427357 1.3929359355857986 0.9597114342037498 0.7002907590305087 0.5994833299382124 0.07967607325715824 0.16393555306850544 0.6453370540832528 0.0173945167149959 0.01685811612917197 9.815596917775641e-10 9.008083284427357 -0.2594206751732411 GNKHDDGTQS(ph)DSENAGAHR ddPTM_A549_PD325901_60min_R1 4 GNKHDDGTQSDSENAGAHR 19 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGT(0.005)QS(0.995)DSENAGAHR;GNKHDDGT(0.014)QS(0.863)DS(0.123)ENAGAHR;GNKHDDGT(0.088)QS(0.9)DS(0.011)ENAGAHR;GNKHDDGT(0.028)QS(0.965)DS(0.007)ENAGAHR 192.94 1.0699999999999999e-43 457921000.0 1546.38 1703.93 1596.79 1812.35 2365.7200000000003 1944.08 1924.0700000000002 1782.46 2203.5699999999997 2229.73 1837.99 True False 1703.3673592152122 1847.5261610428558 1705.157771678308 1924.2947433545128 2199.55998849094 1928.248057037669 1997.2915367415026 1746.90743698718 2110.9616160210935 2088.944467271898 1611.9288819785734 1.0567261237508208 1.1461586064362201 1.057836850460363 1.1937838975827046 1.3645515091156348 1.1962364336265428 1.239069266064588 1.0837372892301094 1.309587314689702 1.2959284312269461 1.0 10.654572378478228 -2.2368837676707614 16.88354108497207 1.1598271389078278 0.008862268323107214 0.0 0.11448493322682289 0.0 0.0 0.0170867888561598 0.0 0.00579583792480379 2.2368837676707614 -1.1509648705847206 GNKHDDGTQS(ph)DSENAGAHRR ddPTM_A549_MK2206_60min_R1 1 GNKHDDGTQSDSENAGAHRR 20 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGT(0.224)QS(0.717)DS(0.059)ENAGAHRR 44.258 0.012001000000000001 6081900.0 0.0 0.0 137.04 0.0 132.44 0.0 123.08 111.23 250.68 100.64 182.47 True False 0.0 0.0 156.47433265503645 0.0 112.95825144220713 0.0 145.44204282667476 126.9971931275886 193.90138025370172 77.90535410248445 137.15766308419444 0.0 0.0 1.140835511020514 0.0 0.8235650046973134 0.0 1.0604004147941406 0.925921237442134 1.4137116067271798 0.5679985525465109 1.0 7.099691418484581 -7.866385018966565 6.363320184823467 1.1715151735086373 0.3587887770889193 0.36198223969208676 0.41110101682181216 0.12496044590578895 6.722689271984885 0.05628217381547969 0.07811973487526389 1.3602382436064351e-08 7.866385018966565 -0.812726396419718 GNKHDDGTQS(ph)DSENAGAHRR ddPTM_A549_PD325901_60min_R1 2 GNKHDDGTQSDSENAGAHRR 20 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGT(0.001)QS(0.999)DSENAGAHRR;GNKHDDGTQS(0.995)DS(0.005)ENAGAHRR 166.49 2.2408e-28 63278000.0 1686.7 1976.8200000000002 1689.54 2376.5 2587.2 3193.5 2305.4 2869.2 2665.6 2169.99 2969.9 True False 1857.9325423170865 2143.413559050393 1804.202344429366 2523.291007576902 2405.4839973554626 3167.493194801552 2393.133258563285 2811.971555156145 2553.574101873697 2032.9764610671907 2604.6211277472494 0.7133216123160385 0.8229271951365313 0.6926928163213627 0.9687746830800339 0.9235446843802494 1.2161051605770907 0.9188028281998613 1.0796086713725745 0.9804013622826967 0.780526748942378 1.0 11.346857815756012 -6.353270389843049 4.611075475963246 1.0033623661132791 0.7513858457870712 0.4957208667597459 0.10679950001030811 0.09499931479992432 3.4524534507780573 0.010698034810088384 0.025757168500794635 4.4333254109101194e-07 6.353270389843049 -0.2519765203262079 GNKS(ph)PSPPDGS(ph)PAATPEIR ddPTM_A549_PD325901_60min_R1 2 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 2 GNKS(0.957)PS(0.043)PPDGS(0.846)PAAT(0.153)PEIR;GNKS(0.886)PS(0.114)PPDGS(0.992)PAAT(0.007)PEIR 96.831 5.2152e-07 37408000.0 8702.2 8674.3 8990.5 10110.2 11452.3 9883.8 9086.599999999999 8924.900000000001 9642.3 10979.0 11238.7 True False 9585.640937778953 9405.313703458498 9600.649394268397 10734.684092069849 10647.92995629018 9803.309609763442 9432.395535378304 8746.885868051391 9237.067663001486 10285.784066312139 9856.411147989158 0.9725285191389925 0.9542330937947237 0.9740512292069979 1.0891067682642146 1.0803049706852481 0.9946124875039787 0.9569807299792522 0.8874311082118236 0.9371633878002312 1.0435628051504913 1.0 13.266846722187735 -7.613948029224886 4.9402263038927545 0.9612815018984421 1.0148312659858794 0.1587190420044703 0.05334528568614522 0.28672746159475193 11.976817728666258 0.008414473162360483 0.012592789300755181 2.4324950813676835e-08 7.613948029224886 0.05354976408743728 GNKS(ph)PSPPDGSPAATPEIR ddPTM_A549_MK2206_60min_R1 2 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 GNKS(0.608)PS(0.392)PPDGSPAATPEIR;GNKS(0.625)PS(0.375)PPDGSPAATPEIR 166.49 4.4965e-28 218987000.0 15960.400000000001 18115.1 17158.3 17047.2 22114.0 15571.599999999999 15907.2 16824.7 25546.0 25047.0 24695.0 True False 18654.12532568409 19037.081214151964 19591.604947423457 21223.764765277898 18861.059894238675 17219.37637640848 18797.332333868064 19209.65274848279 19759.871788579334 19388.865304103005 18562.54995267266 1.004933340152345 1.0255639048885619 1.0554371569301895 1.1433647219477017 1.0160813003777551 0.9276406754627594 1.0126481750510576 1.034860662864746 1.0645020128678109 1.0445151853348345 1.0 14.180107287826551 GNKS(ph)PSPPDGSPAATPEIR ddPTM_A549_PD325901_60min_R1 1 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 GNKS(0.765)PS(0.235)PPDGSPAATPEIR 105.17 4.5704e-10 142520000.0 12235.0 11983.0 11669.0 11834.0 13669.0 12803.0 11365.0 13989.0 13837.0 13875.0 14416.0 True False 13477.08819306905 12992.849464342162 12460.928511397355 12564.959303035996 12708.93659549003 12698.736612821125 11797.501294166628 13709.978420841791 13255.479009463665 12998.93013207768 12642.92339055332 1.06597879119785 1.027677623519439 0.9856050002413247 0.9938333813225841 1.0052213560817773 1.0044145820190216 0.933130806042977 1.0843993906572087 1.0484504730423376 1.0281585777693127 1.0 13.626042472289813 -8.280974230933412 24.999385441607682 1.0281326625230012 1.0024744736541773 0.17830615148999995 0.03595111170053087 1610.6184422020415 2061154.9017410937 0.006290109213174582 0.007611818921998113 5.236315055847451e-09 8.280974230933412 -0.025658188868823872 GNKSPS(ph)PPDGSPAATPEIR ddPTM_A549_PD325901_60min_R1 4 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 GNKS(0.385)PS(0.615)PPDGSPAATPEIR;GNKS(0.438)PS(0.562)PPDGSPAATPEIR;GNKS(0.39)PS(0.61)PPDGSPAATPEIR;GNKS(0.16)PS(0.84)PPDGSPAATPEIR 164.79 1.2494000000000002e-27 265639000.0 29203.199999999997 27932.700000000004 27637.5 30923.7 34307.5 33219.2 30971.499999999996 31914.7 33026.6 33260.5 36582.700000000004 True False 32167.887365740407 30286.686658819188 29513.14694778851 32833.7867161817 31897.8595544498 32948.673848990664 32150.137380755117 31278.136271902204 31638.606855095226 31160.426353727555 32083.25981684206 1.002637747828041 0.9440027862418219 0.9198924023392295 1.023393099816673 0.9942212772813399 1.0269740056680372 1.002084500275061 0.9749051826548745 0.9861406551489692 0.971236293681415 1.0 14.969533113694657 -6.267871357854539 24.9972692850078 0.9966687667863923 0.9543601593612586 0.36854597638864317 0.024376495623566825 363.65043733275166 1413293.3711760484 0.0031647795661443826 0.007504306940702814 5.396704543502515e-07 6.267871357854539 -0.04230860742513365 GNLANVIR ddPTM_A549_MK2206_60min_R1 2 GNLANVIR 8 0 P05141;Q9H0C2;P12236;P12235;V9GYG0 P05141;P12236 SLC25A5;SLC25A31;SLC25A6;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 0 ; 108.92 0.0047431999999999995 20467400.0 6855.5 7239.3 6780.2 6492.1 11317.0 8333.0 6391.700000000001 8203.5 12296.8 9275.0 11191.3 False True 8012.540799117023 7607.749448449654 7741.734313103316 8082.664791441445 9652.284291539247 9214.792529002269 7552.989154495103 9366.37124716509 9511.594433954522 7179.77105823274 8412.191345832984 0.9524915054489423 0.9043718973675255 0.9202993601587793 0.9608275013198825 1.1474161600378419 1.095409287565345 0.8978622625169493 1.113428221268976 1.1306916406111154 0.8534959278820103 1.0 13.038265951011466 -6.584410978404827 7.520095736891686 1.0618897429309373 0.926293645320292 0.18497979687762944 0.091060367093731 0.1682231741982996 17.486847784591227 0.010479212272945043 0.0219169027181606 2.6036884802174307e-07 6.584410978404827 -0.13559609761064528 GNLANVIR ddPTM_A549_PD325901_60min_R1 2 GNLANVIR 8 0 P05141;Q9H0C2;P12236;P12235;V9GYG0 P05141;P12236 SLC25A5;SLC25A31;SLC25A6;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 0 ; 94.262 0.007034 8857700.0 3304.4 3061.0 2997.4 3176.8999999999996 3720.5 3730.2000000000003 3022.8 3381.1000000000004 3933.5 3421.1 3615.8 False True 3639.86025542929 3318.961212580435 3200.8215888304426 3373.129897736611 3459.1849150282146 3699.822487943868 3137.8343081396274 3313.6613080783604 3768.1886741147173 3205.09116215142 3171.079522444694 1.1478300148787177 1.0466344943698336 1.0093791613156455 1.0637165904739436 1.0908540421469501 1.1667391062749344 0.9895161209077985 1.0449631693637709 1.1882983846490522 1.010725571360161 1.0 11.630758341604963 -6.725491063351238 8.171098818252638 1.0858981253792688 1.0612430093494203 0.0 0.06838790114004899 1.0818258418626114 212.86322854452297 0.011553211668910915 0.0239312345818818 1.8815204226074869e-07 6.725491063351238 -0.02465511602984849 GNLELRPGGAHPGT(ph)CSPSRPGS ddPTM_A549_MK2206_60min_R1 2 GNLELRPGGAHPGTCSPSRPGS 22 2 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 GNLELRPGGAHPGT(0.791)CS(0.202)PS(0.006)RPGS(0.001);GNLELRPGGAHPGT(0.484)CS(0.484)PS(0.032)RPGS(0.001) 63.803000000000004 0.0021908 16972800.0 4555.7 4937.200000000001 4329.8 4281.3 6079.1 4875.9 4044.7 5036.6 6802.3 7347.4 8232.9 True False 5324.5907838286685 5188.482391513766 4943.830746714657 5330.218692194858 5184.872442935072 5391.864501639525 4779.569634555175 5750.5534739405975 5261.589911040992 5687.617237009081 6188.443713519284 0.8604086956784561 0.8384147342536217 0.7988811041319414 0.8613181179220316 0.8378313971908949 0.871279557711812 0.7723379020340315 0.9292406524402782 0.8502282891490981 0.9190706905168909 1.0 12.595360926882787 -11.024933515098075 0.4006417638508448 1.0663037872255088 0.8355639578138823 0.4682416373169779 0.043928516049816235 1.0681560578736495 0.18357167796393076 0.106403266231629 0.01017216164158877 9.442054109322287e-12 11.024933515098075 -0.23073982941162652 GNLELRPGGAHPGT(ph)CSPSRPGS ddPTM_A549_PD325901_60min_R1 1 GNLELRPGGAHPGTCSPSRPGS 22 2 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 GNLELRPGGAHPGT(0.655)CS(0.343)PS(0.002)RPGS 114.91 1.2813999999999999e-14 12449000.0 3057.4 3886.3 4311.7 3268.2 3865.9 4106.9 3639.7 4282.8 3842.3 3971.4 4549.4 True False 3367.784997261079 4213.812139971035 4604.317890358383 3470.069291379266 3594.3725206309823 4073.4547680383553 3778.2107752202633 4197.376194208395 3680.8214929581763 3720.6451262366363 3989.852641022702 0.8440875641958118 1.0561322733189782 1.1540070034211032 0.8697236724236006 0.9008785145783359 1.0209536879021737 0.9469549668009319 1.052012836527341 0.9225457238978849 0.9325269529961736 1.0 11.962119748405035 -6.289158216142086 24.999652651702238 0.9624677587076946 1.021881401620223 0.09362299483644787 0.08432303912845798 1304.9995609602252 1176978.639748806 0.01142770206007875 0.026561137250829456 5.13856416436471e-07 6.289158216142086 0.059413642912528264 GNLLHFPS(ph)SQGEEEKEKLEGDHTIR ddPTM_A549_MK2206_60min_R1 1 GNLLHFPSSQGEEEKEKLEGDHTIR 25 2 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GNLLHFPS(0.491)S(0.491)QGEEEKEKLEGDHT(0.019)IR 40.141999999999996 0.051661 2958700.0 417.01 347.88 379.43 363.84 494.25 428.81 335.98 365.54 566.54 433.64 720.99 True False 487.39109308435417 365.5856060843817 433.23887944615063 452.98081633339825 421.5464797290158 474.18638957895894 397.0232170044375 417.35641441930005 438.2195945784754 335.68042282394015 541.9482846882958 0.8993313695322047 0.6745765535444956 0.799410002183751 0.835837715759046 0.7778352504085705 0.8749661231083877 0.7325850606442779 0.7701037648995321 0.8086003904053678 0.6193956735503063 1.0 9.082011379022846 -10.463917830157172 0.6731266522890149 1.010108921938784 0.7917289547682339 0.0 0.12713058813553296 0.39243169930563904 0.3023508511810895 0.04693071036875832 0.01163425739719341 3.4362295626294855e-11 10.463917830157172 -0.21837996717055008 GNLLHFPS(ph)SQGEEEKEKLEGDHTIR ddPTM_A549_PD325901_60min_R1 1 GNLLHFPSSQGEEEKEKLEGDHTIR 25 2 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GNLLHFPS(0.499)S(0.499)QGEEEKEKLEGDHT(0.001)IR 44.632 0.019399 2767500.0 574.19 451.9 446.63 683.17 596.2 474.09 565.43 659.68 806.68 673.86 787.52 True False 632.4813461036626 489.9831989431877 476.94099760437035 725.3678593083574 554.3249687783423 470.2291682240383 586.9477480651685 646.5221648910515 772.7780449052653 631.3123645983331 690.6600325005935 0.9157636410691234 0.7094419481161546 0.6905582705829448 1.0502531276959828 0.8026017761174937 0.6808402775552735 0.8498359836171121 0.9360932071749728 1.1188978781751082 0.9140710840217768 1.0 9.43183192915971 -8.434469241812115 2.833228877886647 1.0556770075597142 0.8082300814249856 0.3573302629320759 0.11274637007411649 0.15964050930388182 2.5029371300156185 0.018340871038300597 0.022130116425294707 3.677314364263327e-09 8.434469241812115 -0.24744692613472852 GNLT(ph)PLTGR ddPTM_A549_MK2206_60min_R1 1 GNLTPLTGR 9 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 GNLT(0.975)PLT(0.025)GR 74.53 0.0022734 11073000.0 2039.1 2362.6 2167.2 2374.1 2550.4 2538.9 2241.5 2337.6 3109.7 3151.3 3282.6 True False 2383.2502287914103 2482.846248519492 2474.54154794217 2955.754606577399 2175.239538494452 2807.564712814578 2648.7515355540427 2668.9619585997593 2405.3579151704807 2439.4191413270983 2467.4398248488887 0.9658797774074858 1.006243890333393 1.0028781747873896 1.1979034207079056 0.8815775430826032 1.137845261529942 1.0734817152901623 1.0816725626786916 0.9748395445946852 0.98864382294571 1.0 11.26879918577712 -8.776939559132831 24.924122669959804 0.9881186697620045 1.044745904070437 0.0869356749091873 0.08017646166437158 393.66888757506246 633012.317809744 0.01295655704402109 0.013817765459985936 1.6713231965760355e-09 8.776939559132831 0.05662723430843253 GNLT(ph)PLTGR ddPTM_A549_PD325901_60min_R1 1 GNLTPLTGR 9 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 GNLT(0.994)PLT(0.006)GR 112.94 0.00027372 20122000.0 3209.9 3672.0 3633.3 3680.0 4516.6 3920.8 4138.8 3976.7 3548.2 4019.8 4301.6 True False 3535.7666849965112 3981.452326885119 3879.877586807781 3907.305242113612 4199.369597424118 3888.870304737098 4296.304298838264 3897.3815988392003 3399.0814931978744 3765.9891419766413 3772.530470089082 0.9372400602275374 1.055379766565836 1.028454936963349 1.0357252971428876 1.1131439840497714 1.030838673291158 1.138838859726112 1.0330947966464457 0.9010083603427094 0.9982660635442697 1.0 11.88131683786438 -8.622893569802214 7.036398488309887 0.9534410723789734 1.051825688766696 0.2941538030147367 0.05450236038681908 0.1703007543761696 10.534014022274187 0.009693264009896502 0.010990417624019705 2.382903363038143e-09 8.622893569802214 0.09838461638772256 GNPTVEVDLFT(ph)SK ddPTM_A549_PD325901_60min_R1 1 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y798;A0A2R8YEG5 P06733 ENO1 Alpha-enolase;Enolase 1 GNPTVEVDLFT(0.5)S(0.5)K 125.61 2.5646e-06 6567500.0 1648.3 1804.9 1934.2 1469.2 2169.1 1746.7 1690.3 1934.6 1766.3 1883.7 1663.1 True False 1815.634202585672 1957.0052572971001 2065.4664432894647 1559.9491472047066 2016.749898988765 1732.475454316539 1754.6252914676509 1896.0128853356598 1692.068553473707 1764.7628605257466 1458.5492432595197 1.2448220113077226 1.3417478130005722 1.416110188143957 1.0695210699356175 1.3827095028219931 1.1878073108075924 1.202993522211475 1.2999306633614305 1.1601038232293932 1.2099439691058427 1.0 10.510318379713414 -9.907225653285094 0.2827711168059342 0.9194528592493512 1.3190812555690141 0.15737649728712866 0.11139364553925886 1.3268804466329576 0.2136606766531462 0.18553015568712947 0.06128205563003341 1.2381530924925678e-10 9.907225653285094 0.39962839631966296 GNPTVEVDLFTS(ph)K ddPTM_A549_PD325901_60min_R1 1 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y798;A0A2R8YEG5 P06733 ENO1 Alpha-enolase;Enolase 1 GNPTVEVDLFT(0.03)S(0.97)K 130.2 4.3855000000000005e-08 5732000.0 1554.9 1362.9 1483.2 1571.8 1897.2 1634.8 1976.3 1931.4 1593.9 1701.4 1835.9 True False 1712.7523033431194 1477.7563660979665 1583.8588712061496 1668.8865161832 1763.9472169846865 1621.4867308162131 2051.509177972857 1892.8767118460119 1526.9139259365575 1593.9733136372588 1610.095938728971 1.0637579178636936 0.9178064055391165 0.9837046557961426 1.0365137107920654 1.0955541061591445 1.0070746045706034 1.2741533772157345 1.1756297660996966 0.9483372320918476 0.989986543842574 1.0 10.652930939588808 -4.222480572135052 16.216145844941465 1.0179866240577857 1.0224666034799876 0.0 0.10278694065144077 0.0 0.0 0.014552138919123754 0.0 5.991277395792485e-05 4.222480572135052 0.004479979422201907 GNPTVEVDLFTSK ddPTM_A549_MK2206_60min_R1 2 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y798;A0A2R8YEG5 P06733 ENO1 Alpha-enolase;Enolase 0 ; 172.99 2.4248000000000004e-21 22229600.0 6158.4 5927.3 5719.9 5248.7 8973.5 6820.2 6441.799999999999 6803.4 9706.3 8208.5 8219.4 False True 7197.787361575708 6228.9742524547455 6531.067829491702 6534.6317356230975 7653.510037123572 7541.909037117639 7612.191675990197 7767.802784538673 7507.838547776071 6354.19414894916 6178.296136100332 1.1650117124555424 1.008202603960386 1.0570985407012288 1.0576753835803798 1.2387735823155894 1.220710187886527 1.2320859195323264 1.257272654696934 1.215195643327471 1.0284703110653828 1.0 12.592993308078947 -4.913762618689787 20.24879294620665 1.1261486194252617 3.3328020923673667 0.006755945450319101 0.09853202331556984 2943.3015831118146 739830.2395467917 0.015495641547008263 20977.05645458982 1.2196560693885723e-05 4.913762618689787 2.2066534729421052 GNPTVEVDLFTSK ddPTM_A549_PD325901_60min_R1 2 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y798;A0A2R8YEG5 P06733 ENO1 Alpha-enolase;Enolase 0 ; 257.95 1.1049999999999999e-68 46761000.0 11911.5 11437.3 11217.0 11316.2 13373.8 13952.4 13912.9 14632.1 13259.8 12919.9 13886.8 False True 13120.746711217167 12401.161410207837 11978.253073300555 12015.175973045123 12434.470425105323 13838.776280303484 14442.363022930998 14340.251286839608 12702.5367181966 12104.135309076066 12178.811635678137 1.0773421170896187 1.018257099393698 0.9835321730578342 0.9865639056150898 1.0209920965259227 1.1362993939213608 1.1858597911656446 1.1774754151570486 1.0430029709125475 0.9938683404558697 1.0 13.572085746705355 -5.219313038443425 20.12879042087917 1.0436205691429052 1.0773432073234872 0.0 0.0733226575914752 8185.335577507783 3910057.8688302953 0.011037050069957864 3.0578856579900595 6.0351346147441485e-06 5.219313038443425 0.033722638180581965 GNRES(ph)DGFREEK ddPTM_A549_MK2206_60min_R1 2 GNRESDGFREEK 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 GNRES(1)DGFREEK;GNRES(1)DGFREEK 68.48100000000001 0.0013683 110532000.0 9417.599999999999 11354.8 9656.7 9146.0 13477.8 11574.5 9373.4 10656.3 14264.8 15145.9 16545.0 True False 11007.060641786073 11932.710819727887 11026.165266709653 11386.770410579547 11495.233473933695 12799.30590746872 11076.425448745144 12166.863158550053 11033.845576204745 11724.430670715605 12436.419881229778 0.8850666628262503 0.9594972615662376 0.8866028464792657 0.9155987429923895 0.9243201487015881 1.0291792999677218 0.8906442171080708 0.9783252153550585 0.887220412432204 0.9427496645084511 1.0 13.602283610760647 GNRES(ph)DGFREEK ddPTM_A549_PD325901_60min_R1 2 GNRESDGFREEK 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 GNRES(1)DGFREEK;GNRES(1)DGFREEK 97.904 8.291200000000001e-05 168257000.0 12494.7 12997.6 11993.3 13177.900000000001 14131.199999999999 13224.9 12675.8 12719.4 13841.9 12552.6 14375.1 True False 13763.152745888015 14092.953367081165 12807.237459571677 13991.868953817651 13138.673261993466 13117.200799101622 13158.184505463903 12465.701588823738 13260.173079503873 11760.026693759877 12607.05383126686 1.0917025444718818 1.1178625518461034 1.0158787002089529 1.1098444681116773 1.0421684112594278 1.0404652010424151 1.0437160562311696 0.9887878449370501 1.0518058586072827 0.932813237030347 1.0 13.621943548187243 -2.0000000000008114 0.15394268897720656 1.0020709751311065 1.371684004235865 0.4677747490553317 0.03813908592275621 39.95954146473131 0.3806229701350065 0.04824546349087326 3.3481056404565512 0.009999999999981317 2.0000000000008114 0.36961302910475835 GNRGS(ph)GGGGGGGGQGSTNYGK ddPTM_A549_MK2206_60min_R1 2 GNRGSGGGGGGGGQGSTNYGK 21 1 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK 97.691 1.9381e-07 55098000.0 2901.9 3095.3 3117.3999999999996 2418.7 3843.3 2779.8 2459.5 2578.3 4379.2 4492.1 4499.5 True False 3391.6697753566755 3252.8375489047553 3559.49419599249 3011.2816085795685 3277.9556611887233 3073.956590918101 2906.3593137163352 2943.7819207125954 3387.318192145405 3477.331490101056 3382.1499701174594 1.002814720022272 0.9617662071891468 1.052435352495286 0.890345382429919 0.9691928773563174 0.9088764892383956 0.8593230162456101 0.8703877553396487 1.0015280877765944 1.028142312086856 1.0 11.723724917309973 -8.892536878458584 21.913509508868902 1.0007360718372071 0.939347966768898 0.2404771126678974 0.05514618678614299 4.837478942931742 966.4686323415677 0.00978910594238365 0.010421220683345828 1.2807463343331415e-09 8.892536878458584 -0.06138810506830916 GNRGS(ph)GGGGGGGGQGSTNYGK ddPTM_A549_PD325901_60min_R1 4 GNRGSGGGGGGGGQGSTNYGK 21 1 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(0.999)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK 149.52 1.6902000000000001e-22 83507500.0 8515.8 7764.240000000001 7373.470000000001 8006.889999999999 8753.16 10205.7 9016.32 8840.01 9254.800000000001 9809.8 11969.1 True False 9380.317746999383 8418.559753402655 7873.878014477076 8501.457410333442 8138.368238362682 10122.588162889053 9359.440991519612 8663.689065696308 8865.852940433933 9190.407553849052 10496.976578376234 0.8936209085502612 0.8019985269610759 0.7501091343480046 0.8098958158910671 0.775305934770562 0.9643336904972789 0.891632073448659 0.8253508999480386 0.8446101479065492 0.8755290140192641 1.0 13.357686230917645 -14.999999849602446 0.1900298675543043 1.7395557105680122 0.8048070749728119 0.147529229728944 0.06781902813784656 28.059030371347433 0.32139182721095927 7.688840012129063 0.057202452169370456 1.0000003463032258e-15 14.999999849602446 -0.9347486355952003 GNRTDGS(ph)ISGDR ddPTM_A549_PD325901_60min_R1 1 GNRTDGSISGDR 12 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 GNRT(0.009)DGS(0.98)IS(0.011)GDR 54.343 0.017277 1537000.0 250.46 157.08 200.73 365.22 294.61 316.51 249.98 372.05 297.26 285.68 299.34 True False 275.8865148210929 170.317682872308 214.35274488754732 387.7788099251991 273.9176099493245 313.9324474985559 259.4931256943049 364.6291708824211 284.76719594949554 267.64211604554623 262.523077672602 1.0509038567845705 0.6487722313110877 0.8165101018466311 1.4771227480762894 1.0434039261528574 1.195828002176889 0.988458340481305 1.3889413994192072 1.0847320489844121 1.019499384276335 1.0 8.03630044143113 -6.105948704660656 20.410155870464564 1.0985680827948818 0.8193643592984247 0.34985981320779425 0.17866700387513987 5.977468497592751 1143.7886597209783 0.023767349966106674 0.06288287150658718 7.835221805818767e-07 6.105948704660656 -0.27920372349645717 GNRTDGS(ph)ISGDRQPVTVADYISR ddPTM_A549_PD325901_60min_R1 1 GNRTDGSISGDRQPVTVADYISR 23 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 GNRT(0.042)DGS(0.936)IS(0.022)GDRQPVTVADYISR 89.634 2.247e-07 11935000.0 1173.2 1261.8 1367.9 1101.0 1348.4 1489.1 1183.9 1344.2 1289.9 1573.0 1681.8 True False 1292.3024003358082 1368.1363142874857 1460.7339198509242 1169.006269447578 1253.693035727468 1476.973263309532 1228.9539623549376 1317.3888764955002 1235.6899887480806 1473.680511550141 1474.949261808586 0.8761673596495002 0.9275819512664957 0.9903621484984297 0.792573886924178 0.8499906187892774 1.0013722516111938 0.8332177886905693 0.8931757251636677 0.8377847433428828 0.999139800743458 1.0 10.526449611342562 -10.959831411231264 1.2219380176766885 1.0000546344003431 0.8860157187348722 0.3236260486385657 0.06128568025636063 0.45302703007271106 1.2017298383469706 0.04309140298512504 0.009984755240858402 1.0969039206241527e-11 10.959831411231264 -0.11403891566547097 GNRTDGSIS(ph)GDRQPVTVADYISR ddPTM_A549_MK2206_60min_R1 1 GNRTDGSISGDRQPVTVADYISR 23 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 GNRT(0.016)DGS(0.466)IS(0.517)GDRQPVT(0.001)VADYISR 41.89 0.024057 4527200.0 2560.9 2669.3 2667.2 2416.1 3568.8 2762.0 2420.7 2701.3 4569.5 4366.7 4857.6 True False 2993.11731200624 2805.155968497873 3045.449066385822 3008.0446084628525 3043.8342475607715 3054.2730067327816 2860.5098559516687 3084.217547384297 3534.515545992061 3380.2594371951395 3651.323857060246 0.8197348219930451 0.7682572344476614 0.8340670906244328 0.8238230094672263 0.8336248349143763 0.8364837320105146 0.7834171845426832 0.8446847412399793 0.9680093260305237 0.9257627012895684 1.0 11.83420392008885 -8.74501936637592 3.1536919591701773 0.9866953626853764 0.8147923462214604 0.8467917912697561 0.02765571439100356 0.04250292019607543 0.853605755195394 0.003902223473575234 0.004270965163642038 1.798790700354973e-09 8.74501936637592 -0.17190301646391604 GNS(ph)DGYIIPINK ddPTM_A549_MK2206_60min_R1 2 GNSDGYIIPINK 12 0 H0Y3V3;H0Y5C0;B1ALU1;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;A0A6I8PRJ0;O95490-2;O95490-5;O95490;O95490-7;O95490-6 H0Y3V3 ADGRL2;LPHN2 Latrophilin-2 1 GNS(0.999)DGY(0.001)IIPINK;GNS(1)DGYIIPINK 139.86 5.0262e-09 9577300.0 6546.5 7249.6 6134.8 5808.2 8287.1 6998.7 6610.3 6193.799999999999 10020.400000000001 9711.1 9653.7 True False 7651.389153441703 7618.57367445479 7004.806888296244 7231.2092607400045 7068.07856785499 7739.2977886389335 7811.3059448908625 7071.790117716967 7750.795399290699 7517.355765348137 7256.419861434143 1.0544303250845106 1.0499080565810965 0.9653254665602866 0.9965257522062463 0.974044873756529 1.0665449266202405 1.0764682989756127 0.9745563587495216 1.0681294009025062 1.0359593172524093 1.0 12.825042218268948 -7.262391607989546 24.999641435042182 1.0339596375035853 1.0073590400418126 0.1236624012536367 0.03783037034978625 175.60929847505574 4610507.141727817 0.0061702399425177835 0.01025657349387826 5.4652293505440186e-08 7.262391607989546 -0.02660059746177268 GNS(ph)DGYIIPINK ddPTM_A549_PD325901_60min_R1 2 GNSDGYIIPINK 12 0 H0Y3V3;H0Y5C0;B1ALU1;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;A0A6I8PRJ0;O95490-2;O95490-5;O95490;O95490-7;O95490-6 H0Y3V3 ADGRL2;LPHN2 Latrophilin-2 1 GNS(1)DGYIIPINK;GNS(1)DGYIIPINK 161.04 5.1733000000000007e-14 12359900.0 10209.2 9923.6 8871.6 9259.8 11631.4 11934.0 10673.2 10223.5 12220.3 11454.9 12474.9 True False 11245.630468384194 10759.896598877232 9473.680125264616 9831.75681546837 10814.450590151639 11836.813460705089 11079.374466599149 10019.584272319405 11706.723288237981 10731.635659094538 10940.566384906617 1.0278837559907719 0.9834862492787729 0.8659222742192134 0.8986515386472187 0.9884726448048462 1.0819196231956434 1.0126874676144764 0.9158195215690315 1.0700289981685354 0.980903116122003 1.0 13.417399806852202 -6.995199896245679 20.696568094912568 1.0258140227182422 0.9415226010710211 0.19758812272373294 0.0578633081878231 15.403060146657477 66403.2546921815 0.008608296797662146 0.016191655424191157 1.0111139535131896e-07 6.995199896245679 -0.08429142164722103 GNS(ph)PEMR ddPTM_A549_MK2206_60min_R1 3 GNSPEMR 7 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GNS(1)PEMR;GNS(1)PEMR;GNS(1)PEMR 79.986 0.016073 36440600.0 3081.3900000000003 3330.45 3401.5699999999997 2676.96 4076.58 3137.0199999999995 2969.52 3595.78 4210.82 4788.37 4327.6900000000005 True False 3601.453299247496 3499.955679497899 3883.963775024752 3332.8153201732994 3476.9204822128736 3468.977374214655 3509.0433459105225 4105.492826614411 3257.0759932977976 3706.6738913326053 3253.005134832233 1.1071157744831637 1.0759145880285865 1.193961771973981 1.0245342943011315 1.0688333827029721 1.066391607277177 1.0787082099369307 1.262061588115551 1.001251414706351 1.1394614326435022 1.0 11.66755738432092 -8.919645414511605 24.99999997377008 1.0005342337880314 1.1063822612821173 0.03190188709276531 0.07544432152693731 22.119383057134964 6880.403273019708 0.010413408893714502 0.0110858953806085 1.2032464401879909e-09 8.919645414511605 0.10584802749408584 GNS(ph)PEMR ddPTM_A549_PD325901_60min_R1 3 GNSPEMR 7 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GNS(1)PEMR;GNS(1)PEMR;GNS(1)PEMR 88.39200000000001 0.012789 45062900.0 4148.9400000000005 4783.83 4294.27 4094.6 5073.41 3934.3399999999997 3906.05 3838.4300000000003 4392.29 4836.22 4907.82 True False 4570.137334511805 5186.980142952846 4585.7049857432785 4347.514142488692 4717.071183914335 3902.30003946627 4054.696870222575 3761.8695024599197 4207.697325899918 4530.860243845535 4304.189253234282 1.0617881941593723 1.2051003888955887 1.0654050544588527 1.0100657491354161 1.0959255986176266 0.9066283589955945 0.9420349876985006 0.8740018807567886 0.9775818576606832 1.0526628773214204 1.0 12.071525798592841 -6.4688675505530195 1.1885398326708352 0.9731542881581251 1.1309836660699935 0.4699941396518805 0.0648826097921144 0.3189114913231147 0.837965333109809 0.009355654159221747 0.03578253061086364 3.3972886598499455e-07 6.4688675505530195 0.15782937791186835 GNS(ph)PNSEPPTPK ddPTM_A549_MK2206_60min_R1 1 GNSPNSEPPTPK 12 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 GNS(0.978)PNS(0.022)EPPTPK 96.059 0.00025746 4207400.0 1424.7 1690.9 1451.9 1309.5 2401.8 1816.7 1403.3 1535.2 2298.0 1953.3 2672.5 True False 1665.1545294292205 1776.9595875821587 1657.8012520566792 1630.3275587856897 2048.49840164522 2008.9419881721378 1658.26144539058 1752.8193013528185 1777.5066691519328 1512.0481733742333 2008.844492752286 0.8289116133363905 0.8845680160874845 0.825251162067479 0.8115747956936198 1.0197396608030145 1.000048533084668 0.825480245670297 0.8725510151118311 0.88484035253351 0.7526954818202977 1.0 10.972150172168599 -14.999999999997433 0.1982366686083301 1.5379711181943727 0.8639699839339097 0.0 0.0990031482530716 46.49350530318464 0.5446050713584758 9.70915015511067 0.060783533761290275 1.0000000000059104e-15 14.999999999997433 -0.674001134260463 GNS(ph)PPSSGEACR ddPTM_A549_MK2206_60min_R1 2 GNSPPSSGEACR 12 0 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GNS(1)PPSSGEACR;GNS(1)PPSSGEACR 151.74 2.0874e-12 50052000.0 2145.8 1885.6100000000001 2030.27 1508.13 2329.7 2165.42 1707.99 2233.3999999999996 2775.6000000000004 2177.7 2352.6 True False 2507.9585802268707 1981.5794949085057 2318.19281494119 1877.621917702529 1987.0042161349274 2394.5633071105367 2018.309674419338 2549.9912895006432 2146.931031722412 1685.756057521665 1768.3844915431346 1.418220184705627 1.120559190823559 1.3109099440915588 1.061772440711732 1.1236268049382292 1.3540965319261444 1.1413296622264046 1.4419891724313076 1.214063481097908 0.9532746218842001 1.0 10.788216271911129 -10.325722187201237 0.8832315850178909 1.0097412952452205 1.2359144521022867 0.3986757743481949 0.12320124186153361 0.4612529346914936 0.6907814270587126 0.059739920869481454 0.022005929137399367 4.723651107465415e-11 10.325722187201237 0.22617315685706618 GNS(ph)PPSSGEACR ddPTM_A549_PD325901_60min_R1 2 GNSPPSSGEACR 12 0 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GNS(1)PPSSGEACR;GNS(1)PPSSGEACR 173.33 8.4649999999999995e-16 50557000.0 3192.5 3849.6 3944.0 3720.0 4332.700000000001 3267.9 3797.1 3820.8 3021.1000000000004 4286.4 4185.1 True False 3516.600249805718 4174.019302172374 4211.66355719866 3949.775951267022 4028.3860990035614 3241.287305868793 3941.6007183528477 3744.5911466403836 2894.1336731582505 4015.755972478401 3670.3592315347323 0.9581079202253667 1.1372236445714445 1.1474799308506882 1.076127894330238 1.0975454566933829 0.8830981114928834 1.0739005284517336 1.0202247002058737 0.7885150990923826 1.094104342151611 1.0 11.841705556501905 -7.698135155813779 0.9618322722618301 0.9073028219484542 1.0895609674485174 0.020261204489454676 0.10501675681786464 0.4361247473770257 0.8131489206974846 0.01933848638523853 0.03460481362805775 2.0038483171682146e-08 7.698135155813779 0.18225814550006314 GNS(ph)PPSSGEACREEK ddPTM_A549_MK2206_60min_R1 5 GNSPPSSGEACREEK 15 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GNS(1)PPSSGEACREEK;GNS(0.898)PPS(0.051)S(0.051)GEACREEK;GNS(0.459)PPS(0.459)S(0.082)GEACREEK;GNS(1)PPSSGEACREEK;GNS(0.979)PPS(0.011)S(0.011)GEACREEK 166.06 6.4441000000000005e-21 275295400.0 13445.56 16326.359999999999 15709.45 11422.08 17160.43 15480.1 13448.989999999998 12662.41 20086.19 21324.210000000003 22191.16 True False 15714.84181561898 17157.301988478222 17937.28623122929 14220.490112756655 14636.153479284158 17118.193907141256 15892.49739645369 14457.345394504275 15536.700036054335 16507.056150692963 16680.482527141186 0.9421095456950367 1.0285854717069 1.0753457642513116 0.8525227066793888 0.877441851905024 1.0262409303380677 0.9527600517907471 0.8667222528473265 0.9314298918376146 0.9896030359933511 1.0 14.025873402711207 -6.237895813007366 24.93185137001061 0.9502851079714661 1.016670764849831 0.22529279301339078 0.06115470738388697 1059.0204242051198 1121465.8522577826 0.008870967579862122 0.023453653389591485 5.782347489464975e-07 6.237895813007366 0.06638565687836484 GNS(ph)PPSSGEACREEK ddPTM_A549_PD325901_60min_R1 3 GNSPPSSGEACREEK 15 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GNS(1)PPSSGEACREEK;GNS(0.999)PPS(0.001)SGEACREEK;GNS(0.963)PPS(0.031)S(0.006)GEACREEK 149.53 1.8915e-14 362196800.0 17965.999999999996 17965.1 18616.3 17728.53 19128.3 19180.9 18949.399999999998 19954.100000000002 17917.67 21347.5 21965.5 True False 19789.895094129817 19479.082025523934 19879.714066906028 18823.58103368706 17784.794197052586 19024.69710980714 19670.529786509545 19556.09982181138 17164.65264027585 19999.61520681287 19263.882750776844 1.0273056242169956 1.0111711266898369 1.0319681823283704 0.9771436671004433 0.9232196036043351 0.9875837262890288 1.0211092976942202 1.0151691678575416 0.8910276740333493 1.0381923242346538 1.0 14.233610895852955 -6.052463060986992 0.6401632005624805 0.9570276213311132 1.0460486615315483 0.0 0.04637570136117739 1.9303303976786141 0.928913133269877 0.009066579300613541 0.1033700778823738 8.862105972919355e-07 6.052463060986992 0.08902104020043511 GNS(ph)RPGT(ph)PSAEGGSTSSTLR ddPTM_A549_MK2206_60min_R1 2 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 2 GNS(1)RPGT(0.979)PS(0.021)AEGGSTSSTLR;GNS(1)RPGT(0.878)PS(0.121)AEGGSTSSTLR 137.94 1.2650999999999998e-17 110709000.0 3454.4 3659.8999999999996 2872.7 2369.6099999999997 6429.1 5033.3 4368.0 5444.700000000001 6494.9 4111.5 4738.700000000001 True False 4037.418268028567 3846.1732773031763 3280.092056466164 2950.1645563758366 5483.387906577274 5565.920465165867 5161.609059692194 6216.502898694437 5023.815520224059 3182.7092944392343 3561.9500085333066 1.1334853825450073 1.0797942891082022 0.9208697619585059 0.8282442340033337 1.53943426871259 1.5626048798640297 1.4490964351904463 1.7452527081519003 1.4104115746118233 0.8935300290050305 1.0 11.798451553222002 -6.7539274205865105 24.999873964154425 1.3083370648804467 0.991988946686521 0.33888453211119673 0.2460458036761301 204.83249777091154 681678.3098012147 0.03957649336155475 0.08113529752381071 1.7622705329406836e-07 6.7539274205865105 -0.3163481181939256 GNS(ph)RPGT(ph)PSAEGGSTSSTLR ddPTM_A549_PD325901_60min_R1 4 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 2 GNS(0.987)RPGT(0.717)PS(0.069)AEGGS(0.057)T(0.053)S(0.057)S(0.053)T(0.007)LR;GNS(1)RPGT(0.777)PS(0.207)AEGGS(0.01)T(0.003)S(0.001)STLR;GNS(1)RPGT(0.919)PS(0.08)AEGGSTSSTLR;GNS(1)RPGT(0.884)PS(0.116)AEGGSTSSTLR 133.74 3.2890999999999995e-17 134488600.0 7214.42 7791.860000000001 9677.470000000001 7762.71 9497.97 7159.8099999999995 7880.98 8078.77 8188.29 9465.380000000001 9192.55 True False 7946.822607424696 8448.507387735048 10334.241309554594 8242.194966306453 8830.865353417692 7101.502881187441 8180.8950065377285 7917.632594677538 7844.164646845509 8867.734291428142 8061.924626375626 0.9857227617119665 1.0479516715021953 1.281857842697362 1.0223607076827597 1.0953792999411551 0.8808694214225172 1.0147570692701438 0.9821020366246023 0.9729890826791301 1.0999525178412368 1.0 12.976908579676628 -7.211263368794245 24.71653941613576 0.9821634880343659 1.0917771268001237 0.23035800432697784 0.08513619953201935 288.30825012097927 142019.55905783927 0.010827275437403078 0.01875337489778194 6.14803924672164e-08 7.211263368794245 0.1096136387657578 GNS(ph)RPGTPSAEGGSTSSTLR ddPTM_A549_MK2206_60min_R1 2 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNS(0.999)RPGT(0.001)PSAEGGSTSSTLR;GNS(1)RPGTPSAEGGSTSSTLR 140.41 3.7595999999999994e-19 25125000.0 1681.6100000000001 1838.56 1306.6399999999999 1438.56 2643.7 1842.92 2127.65 2256.8 2957.4 2262.9 2709.1 True False 1965.4246565827686 1932.1348508753042 1491.94119979843 1791.0072645794125 2254.815232088213 2037.936571168711 2514.2164642523103 2576.708311160138 2287.5536219973565 1751.7093183476945 2036.3557026436729 0.9651676541731786 0.9488199180363895 0.7326525507609188 0.8795159226132547 1.107279651173382 1.000776322389544 1.2346646811204254 1.2653527612169913 1.1233566017113656 0.8602177488311891 1.0 10.991773872410738 -6.757455473054227 24.47702491006662 1.0874121752647363 0.8757099832082083 0.40215064481479157 0.11894402664505366 55.15554201422145 338867.65571041044 0.01573799331553814 0.03182402104534967 1.7480124718484437e-07 6.757455473054227 -0.21170219205652807 GNSRPGT(ph)PSAEGGSTSSTLR ddPTM_A549_MK2206_60min_R1 1 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNS(0.043)RPGT(0.949)PS(0.006)AEGGSTSSTLR 56.851000000000006 0.023981 3550900.0 180.58 195.87 150.24 260.39 346.85 234.48 358.79 272.29 592.57 292.1 496.02 True False 211.05748924287835 205.83894637158747 171.54629114194887 324.1855616893512 295.82882446941665 259.2925179647731 423.9774987470153 310.8879413531523 458.353841139844 226.1144071277394 372.84454454442994 0.5660736956759407 0.5520771307599452 0.46010138448333016 0.8694925711879893 0.7934374494627057 0.6954440443311208 1.1371428252089983 0.8338272502632942 1.2293430274000545 0.6064575985791165 1.0 8.542430421961939 -7.150117181129705 0.6736964553895566 1.1019114078895653 0.5169890581484721 0.2869450443983428 0.20109441790302945 0.31788898918264324 0.2707528021618792 0.028125198190711687 0.08833201253014442 7.077547925585033e-08 7.150117181129705 -0.5849223497410933 GNSRPGT(ph)PSAEGGSTSSTLR ddPTM_A549_PD325901_60min_R1 3 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNS(0.031)RPGT(0.968)PS(0.001)AEGGSTSSTLR;GNS(0.016)RPGT(0.906)PS(0.058)AEGGS(0.014)T(0.006)SSTLR;GNS(0.001)RPGT(0.994)PS(0.005)AEGGSTSSTLR 94.031 9.7471e-07 126366500.0 6917.880000000001 6822.54 6671.31 7578.42 9157.65 8018.790000000001 7378.19 7413.92 7806.25 8390.73 8111.849999999999 True False 7620.178084925907 7397.49938950621 7124.065214445994 8046.521791559415 8514.448256177428 7953.4876328613545 7658.971057950485 7266.0435494922785 7478.180459465621 7860.937875829057 7114.143875253883 1.0711307247288366 1.039829882445583 1.0013945935542041 1.1310597497962829 1.1968338573801436 1.1179823984902917 1.0765836609787651 1.0213517855278087 1.0511708211971953 1.1049731371293812 1.0 12.796474436179697 -8.934440372254068 0.8268157842423695 1.01391043376144 1.0898434939289703 0.019026364478215374 0.05702219888362417 0.5705576103557115 0.813354742666244 0.014627643948572933 0.013720388975071083 1.1629462101836468e-09 8.934440372254068 0.07593306016753032 GNT(ph)FS(ph)LEEVDK ddPTM_A549_MK2206_60min_R1 1 GNTFSLEEVDK 11 0 Q9HC29-2;Q9HC29 Q9HC29-2 NOD2 Nucleotide-binding oligomerization domain-containing protein 2 2 GNT(1)FS(1)LEEVDK 51.727 0.012354 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GNT(ph)PATGTTQGK ddPTM_A549_MK2206_60min_R1 2 GNTPATGTTQGK 12 0 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 GNT(0.994)PAT(0.005)GT(0.001)TQGK;GNT(1)PATGTTQGK 98.531 0.00026586 14307000.0 2784.8999999999996 2852.9 2553.7 2880.0 3483.0 2443.1000000000004 2834.3999999999996 2827.3999999999996 4032.0 3730.5 4463.799999999999 True False 3254.923035732038 2998.1004242788686 2915.853059699115 3585.600129288111 2970.6553139021994 2701.6272204014713 3349.373790932133 3228.192608549351 3118.758437780936 2887.7774590552276 3355.3152653873353 0.9700796432779594 0.8935376222933763 0.8690250629436787 1.068632854347948 0.88535803015198 0.8051783533639416 0.9982292351134652 0.9621130514472507 0.9294978835381983 0.860657562895767 1.0 11.71223261306734 -11.069771224215554 0.4032514886536141 1.031028349942381 0.9251479651361706 0.0 0.07875577234376376 4.679145043720635 0.7947232082226872 0.2158637229826516 0.019521550974319304 8.51586515160541e-12 11.069771224215554 -0.10588038480621031 GNVFS(ph)SPTAAGT(ph)PNKETAGLK ddPTM_A549_MK2206_60min_R1 1 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 2 GNVFS(0.52)S(0.452)PT(0.033)AAGT(0.989)PNKET(0.005)AGLK 96.679 5.174199999999999e-07 12623000.0 1611.4 1969.6 1599.7 1750.4 2298.2 1878.5 1594.4 1832.7 2741.0 2540.3 2685.4 True False 1883.3649250524645 2069.8442271582094 1826.5615145086233 2179.2480785784414 1960.1378244071298 2077.2816231526185 1884.0818417521139 2092.4908374083575 2120.1678764775656 1966.444465685029 2018.5410667303984 0.9330327512747164 1.025415960702207 0.9048919264581817 1.0796154284382997 0.9710666068251614 1.0291005010452263 0.9333879170483861 1.036635256966925 1.0503466644410564 0.974190963015801 1.0 10.979097223061192 -2.0000404275486954 0.3406505329082499 1.0212919320256384 0.21383480388134993 0.07338098211098054 0.05095797679278224 67.10172661821804 0.8299899481705946 0.012592542066174363 35.030619266826044 0.009999069164615692 2.0000404275486954 -0.8074571281442885 GNVFSS(ph)PTAAGT(ph)PNKETAGLK ddPTM_A549_MK2206_60min_R1 1 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 2 GNVFS(0.248)S(0.77)PT(0.176)AAGT(0.791)PNKET(0.015)AGLK 50.505 0.0064794 13115000.0 1464.9 2077.6 1880.7 1622.5 2325.6 1635.3 1428.0 1825.7 2899.0 2454.9 3227.0 True False 1712.139306633582 2183.3409658529126 2147.411539873957 2020.0125728367925 1983.5073207036912 1808.3463605757142 1687.4491156686008 2084.4985659717586 2242.3811287517215 1900.336384997903 2425.6468393308237 0.7058485509398883 0.9001066975006315 0.8852943903682099 0.8327727433702031 0.817723045474704 0.7455109834020984 0.6956697439657483 0.8593578142425797 0.9244466640371849 0.7834348983474276 1.0 11.244153802047688 -8.846832875613192 1.9755295596544866 0.970942636566778 0.8043457838414829 0.11602820890681298 0.08482685986665219 0.17477983425830818 1.3379136863743184 0.012959272463106665 0.013581448526425434 1.4228762303414576e-09 8.846832875613192 -0.16659685272529512 GNVFSS(ph)PTAAGT(ph)PNKETAGLK ddPTM_A549_PD325901_60min_R1 2 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 2 GNVFS(0.139)S(0.854)PT(0.007)AAGT(0.999)PNKETAGLK;GNVFS(0.433)S(0.454)PT(0.181)AAGT(0.93)PNKET(0.002)AGLK 118.57 5.7752e-15 47875000.0 3777.1000000000004 3912.5 3836.8 4700.0 4990.8 3947.8 4726.7 5104.0 4244.5 4273.9 4724.2 True False 4160.548411445944 4242.220105919945 4097.188320552693 4990.308325525539 4640.263425325308 3915.6504256889166 4906.577155049482 5002.196715989458 4066.1184256463484 4004.0452246116643 4143.1533491712 1.0041985079500435 1.023910955834778 0.9889057863070162 1.2044710646599177 1.1199835087575387 0.945089427228709 1.1842615374183527 1.207340470994177 0.9814066926728017 0.9664245774085666 1.0 12.01651350396412 GNVFSS(ph)PTAAGTPNK ddPTM_A549_PD325901_60min_R1 1 GNVFSSPTAAGTPNK 15 0 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 GNVFS(0.038)S(0.886)PT(0.076)AAGT(0.001)PNK 82.65100000000001 0.00027110000000000003 2586600.0 2150.0 2361.7 2226.4 2208.3 2814.4 2651.8 2651.9 2516.7 3064.8 2743.9 2960.3 True False 2368.2664172536547 2560.72874738687 2377.496892430805 2344.7016755868167 2616.726253152912 2630.2046200014884 2752.8195056753602 2466.502444187044 2935.997114129093 2570.6496857230954 2596.201866887834 0.912204265569143 0.9863365326273773 0.9157596420962446 0.9031276440754971 1.0079055432964776 1.0130971144991952 1.0603256783630888 0.9500426279038673 1.1308816743316592 0.9901578604150035 1.0 11.342186848675318 -7.157356992936031 1.5121926895245632 1.053437507699855 0.9326510863668545 0.3532284606348355 0.05224969203417024 0.27375907624680706 1.2260727014243773 0.009314660428025695 0.019120481802027734 6.960541177985184e-08 7.157356992936031 -0.12078642133300055 GNVFSS(ph)PTAAGTPNKETAGLK ddPTM_A549_MK2206_60min_R1 2 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 GNVFS(0.046)S(0.757)PT(0.183)AAGT(0.012)PNKET(0.002)AGLK;GNVFS(0.049)S(0.917)PT(0.034)AAGTPNKETAGLK 87.95200000000001 9.3613e-07 6908100.0 3536.1 4224.0 4127.700000000001 3965.9 5090.5 4455.0 4337.2 4742.6 6920.5 6433.799999999999 6516.5 True False 4132.9072306553435 4438.9835578372695 4713.069927759735 4937.545678036015 4341.694193344571 4926.425143010336 5125.213098373853 5414.878073603364 5353.017799767605 4980.400111531837 4898.2732037494 0.8437477982019859 0.9062343755018472 0.9621900885708253 1.0080176161379797 0.8863724036505777 1.0057473191245003 1.0463305914522574 1.1054667325331153 1.0928377363006456 1.0167665020643546 1.0 12.258057527878444 -7.4814683460246245 3.714865531114496 1.0503558064488658 0.9277299550637614 0.6259786155739544 0.048213406369835655 0.14254613814797823 4.083144080529986 0.008399871804100909 0.013393877985995391 3.300134603860586e-08 7.4814683460246245 -0.1226258513851044 GNVFSS(ph)PTAAGTPNKETAGLK ddPTM_A549_PD325901_60min_R1 2 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 GNVFS(0.482)S(0.509)PT(0.009)AAGTPNKETAGLK;GNVFS(0.159)S(0.819)PT(0.021)AAGTPNKETAGLK 127.38 6.632200000000001e-18 14777000.0 7282.8 6640.4 7211.8 6812.9 8303.7 8739.0 8407.7 9145.5 8780.7 7657.0 8816.5 True False 8022.144494686001 7200.0098124858305 7701.236116076394 7233.717359781474 7720.47675820986 8667.83248140622 8727.659624369975 8963.08582799404 8411.677714706779 7173.535713248204 7732.126392398268 1.0375081947150864 0.9311810809979024 0.9960049442088474 0.9355404959356591 0.9984933466426699 1.1210153638885 1.128752839962685 1.159200635520647 1.0878867322935386 0.9277571717271417 1.0 12.91664950526812 -7.052991681067111 7.829938397392887 1.0644159494249308 0.9725936658718317 0.32374287795432044 0.06575126221367264 0.27357896971810647 37.00478799500517 0.009246865492084087 0.01613403836886333 8.851325644277417e-08 7.052991681067111 -0.09182228355309907 GNVFSSPTAAGT(ph)PNKETAGLK ddPTM_A549_MK2206_60min_R1 2 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 GNVFSSPTAAGT(1)PNKETAGLK;GNVFSSPTAAGT(1)PNKETAGLK 230.9 1.6456999999999997e-76 33255000.0 8264.6 10552.9 10035.3 8901.099999999999 13766.0 10351.4 9592.8 9532.1 15038.1 14380.0 14932.8 True False 9659.462429929627 11089.997534919718 11458.456439675183 11081.869899585556 11741.039635709934 11446.778277296784 11335.687588785542 10883.304365831944 11631.994360911092 11131.548012656265 11224.573635686189 0.8605638613496536 0.9880105823940951 1.0208366759914527 0.9872864893819274 1.0460120817758056 1.0197962656598503 1.0098991691538366 0.9695962376005757 1.036297211675782 0.9917123245791566 1.0 13.454373024928922 -5.255954690206906 2.8428350570330716 1.0140791100296693 0.8317467674757807 0.7962378753737198 0.021370322544346506 0.13079978781058707 1.4405610810741993 0.0029170275258228037 0.0552399530228705 5.546835798852895e-06 5.255954690206906 -0.18233234255388864 GNVFSSPTAAGT(ph)PNKETAGLK ddPTM_A549_PD325901_60min_R1 2 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 GNVFSSPTAAGT(0.999)PNKETAGLK;GNVFSSPTAAGT(1)PNKETAGLK 254.55 1.3508999999999996e-98 68957000.0 17566.7 15202.9 16968.9 19222.0 21543.0 19264.2 18766.5 18878.8 20093.4 17223.1 18218.4 True False 19350.058452078956 16484.101737582183 18120.51159628508 20409.299283670618 20029.893999315358 19107.318742225147 19480.669426922846 18502.247523867914 19248.94427468072 16135.630526687357 15977.652295952888 1.2110701931459789 1.0316973628070238 1.1341160303554092 1.2773653416428556 1.2536193445884973 1.1958777415043007 1.2192447968001698 1.1580078963512368 1.2047417178778166 1.009887449533151 1.0 13.963767818490373 -10.709491637837555 0.7912771768037921 0.9898938439709469 1.1875805307426888 0.5587549804426755 0.06232590156469224 0.470050349709246 0.4798697111922976 0.05861423926482545 0.012514014032603129 1.952128321113046e-11 10.709491637837555 0.19768668677174184 GNVVPS(ph)PLPTR ddPTM_A549_MK2206_60min_R1 2 GNVVPSPLPTR 11 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(1)PLPTR;GNVVPS(1)PLPTR 156.0 3.5663e-13 1115530000.0 13216.8 12091.7 10439.5 9552.400000000001 14931.5 12120.099999999999 10493.0 13635.599999999999 14196.9 16018.3 15084.1 True False 15447.472720263995 12707.115882173506 11919.978077585032 11892.73842882353 12735.096129638447 13402.640937328752 12399.442276408006 15568.488057273647 10981.324817790723 12399.754904807496 11338.30167001861 1.362415039733075 1.1207248009439008 1.0513018990405347 1.0488994538107055 1.1231925644837375 1.1820677670597515 1.093589025699971 1.3730881846653225 0.9685158445579353 1.0936165984713249 1.0 13.46891693907697 GNVVPS(ph)PLPTR ddPTM_A549_PD325901_60min_R1 2 GNVVPSPLPTR 11 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(1)PLPTR;GNVVPS(1)PLPTR 122.97 7.535800000000001e-06 1708100000.0 28596.0 28091.0 29996.0 28320.0 34985.0 27329.0 28965.0 28418.0 31177.0 31738.0 31161.0 True False 31499.044868737423 30458.32715537309 32031.708940601162 30069.26208061345 32527.774291697915 27106.441684901074 30067.278925256163 27851.180696510266 29866.739110937997 29734.057263559036 27328.394545854073 1.1526123430297177 1.1145304238149567 1.1721035747949058 1.1002937633295837 1.1902555869910267 0.9918783058924084 1.10022119575325 1.0191297790940121 1.092883047367633 1.0880279561855901 1.0 14.7381130882665 -7.259587494424102 24.999060058017236 1.0442694514695157 1.143128602099923 0.5803008865706338 0.04106362442406033 97.13055021228438 1311188.1201579596 0.006360834159176669 0.010669697954339709 5.50063091790281e-08 7.259587494424102 0.09885915063040729 GNVVPS(ph)PLPTRR ddPTM_A549_MK2206_60min_R1 7 GNVVPSPLPTRR 12 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(1)PLPTRR;GNVVPS(0.62)PLPT(0.38)RR;GNVVPS(1)PLPTRR;GNVVPS(0.5)PLPT(0.5)RR;GNVVPS(0.999)PLPT(0.001)RR;GNVVPS(0.995)PLPT(0.005)RR;GNVVPS(0.993)PLPT(0.007)RR 93.23700000000001 0.00011083 951504200.0 21561.2 24305.0 24806.799999999996 22727.600000000002 33690.100000000006 24941.799999999996 24636.0 23547.1 38106.299999999996 37191.0 40863.6 True False 25200.203439270954 25542.0206849514 28324.777257056026 28295.86302028075 28734.330919005606 27581.124720973094 29112.04230645076 26884.97353496936 29475.283893256863 28789.527269728707 30716.040342013937 0.8204248711316372 0.8315531689810479 0.9221493702205131 0.9212080302413581 0.9354829137824215 0.897938810271946 0.9477797913499547 0.8752747175616781 0.9596055860409863 0.9372799016138121 1.0 14.90670462727735 -2.0000000000138205 0.12033933951462114 1.0325745429860258 0.4081648043765974 0.5188450138936278 0.03564522987936327 32.7996377481355 0.26138481660782986 0.11281620972157662 3.456887117280682 0.00999999999968177 2.0000000000138205 -0.6244097386094284 GNVVPS(ph)PLPTRR ddPTM_A549_PD325901_60min_R1 8 GNVVPSPLPTRR 12 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(1)PLPTRR;GNVVPS(0.831)PLPT(0.169)RR;GNVVPS(1)PLPTRR;GNVVPS(0.5)PLPT(0.5)RR;GNVVPS(1)PLPTRR;GNVVPS(0.971)PLPT(0.029)RR;GNVVPS(0.997)PLPT(0.003)RR;GNVVPS(0.978)PLPT(0.022)RR 97.223 0.00010639 1902069000.0 27415.8 29316.300000000003 28439.600000000002 28640.5 34060.5 31114.0 30418.200000000004 31668.100000000002 34365.5 32247.200000000004 36941.200000000004 True False 30199.031833554753 31786.887486563817 30369.68227720765 30409.558637705137 31668.20798234607 30860.61789981382 31575.781246477727 31036.45490235614 32921.23754424543 30211.10628865844 32397.66658956081 0.9321360151068873 0.9811474353775281 0.9374033834582822 0.9386342239691953 0.9774842238962423 0.9525568088214644 0.9746313414019789 0.9579842676804607 1.0161607612460992 0.932508710315362 1.0 14.983602287693396 -8.754977292965387 24.9766251501465 1.0076314712949954 0.957259677980024 0.0 0.027717520237032764 60.91161399654796 235429.46576677728 0.002636026929076849 0.0029544587901180084 1.7580155291857195e-09 8.754977292965387 -0.050371793314971436 GNYAER ddPTM_A549_PD325901_60min_R1 1 GNYAER 6 0 Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;H0YFX9;Q8IUE6;Q93077 Q99878;Q93077 HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST2H2AB;HIST1H2AC Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A;Histone H2A type 2-B;Histone H2A type 1-C 0 124.37 0.041673 63528000.0 8854.0 8732.4 9869.4 9316.0 9261.3 8776.8 8993.0 9102.0 10320.0 10508.0 10207.0 False True 9752.851562029693 9468.309994360467 10539.196833523438 9891.428161828915 8610.81823775051 8705.324650738761 9335.233536158425 8920.45346961913 9886.286288766712 9844.523086693505 8951.603707504011 1.0895088612841526 1.0577222030532145 1.177352927798688 1.1049895063537118 0.9619302327394337 0.9724877167474698 1.0428559888473192 0.996520150030908 1.104415098322457 1.0997496547396275 1.0 13.127930453474841 -6.5707680398158335 24.920255251034877 1.0348080571712863 1.1094847806922623 0.36502315370228333 0.05106535426711022 110.26217343845187 57377.000905413355 0.008028911424959968 0.016713517474367407 2.6867790928710143e-07 6.5707680398158335 0.07467672352097598 GNYPGPS(ph)SPVVVR ddPTM_A549_PD325901_60min_R1 1 GNYPGPSSPVVVR 13 0 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5;H3BU05;H3BP49 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 GNYPGPS(0.787)S(0.213)PVVVR 100.11 0.00015513 24887000.0 3953.5 5197.0 4712.8 5096.6 5451.1 5096.5 4212.0 3923.8 3896.9 6366.1 11061.0 True False 4354.856409587126 5634.969428873088 5032.638948368619 5411.405406781585 5068.233541274101 5054.995793739191 4372.289964894839 3845.5367308384493 3733.12684483479 5964.143359554575 9700.567121456044 0.4489280219457383 0.5808907209568677 0.5187984254278554 0.557844231066909 0.5224677565566255 0.5211031201009247 0.45072519061530525 0.3964239082818942 0.3848359377440658 0.6148241937693395 1.0 13.243853378291249 -10.778633155712816 0.9741163775651213 1.006867019747423 0.48635618796298735 0.38830934765943814 0.12499553517453418 0.1459404059205903 0.24068294961815098 0.05367092245555187 0.012854042165086786 1.6648183123039103e-11 10.778633155712816 -0.5205108317844356 GNYPGPSS(ph)PVVVR ddPTM_A549_PD325901_60min_R1 1 GNYPGPSSPVVVR 13 0 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5;H3BU05;H3BP49 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 GNYPGPS(0.033)S(0.967)PVVVR 149.09 1.0449999999999999e-12 16105000.0 7660.6 7120.0 7204.0 7989.0 8118.5 7151.4 6324.2 6993.1 7007.3 8094.1 9429.8 True False 8438.298472564342 7720.027387642174 7692.906761171186 8482.462385664574 7548.284567304546 7093.161369439112 6564.870891735028 6853.617134519176 6712.807549542152 7583.037144652249 8269.99438042729 1.020351173700357 0.933498504655973 0.9302191038216537 1.0256914328430664 0.9127315231518386 0.8576984509477533 0.7938180595711405 0.8287329856885667 0.81170642212641 0.9169337723613364 1.0 13.013670633728234 -6.9618710309157725 10.170388666946678 0.8888871515646082 0.9708089875696005 0.3859469792730158 0.061218963438117474 0.6210763526424096 160.5124854033862 0.0122388967728618 0.023124169089072073 1.0917645012013106e-07 6.9618710309157725 0.08192183600499237 GPAADPSS(ph)PGTSGVGPAAGAGDSR ddPTM_A549_MK2206_60min_R1 2 GPAADPSSPGTSGVGPAAGAGDSR 24 0 A0A0U1RRM4 A0A0U1RRM4 1 GPAADPS(0.024)S(0.947)PGT(0.024)S(0.005)GVGPAAGAGDSR;GPAADPS(0.018)S(0.979)PGT(0.003)S(0.001)GVGPAAGAGDSR 190.83 1.0835999999999998e-50 23977000.0 2690.9 2442.8999999999996 2885.5 2262.91 3304.7 2653.5 2571.66 2348.1000000000004 3692.7 3639.7 3493.1 True False 3145.058133811393 2567.233175530459 3294.707288938321 2817.3230515858886 2818.5830077096193 2934.2916087492526 3038.8973338937794 2680.95036575466 2856.3093460301766 2817.489242118568 2625.6668653444385 1.1978130871521737 0.9777452004345135 1.2548078099413107 1.072993336957965 1.0734731983373198 1.1175414701226114 1.1573811491486117 1.021055032205302 1.0878414865685873 1.0730566315574714 1.0 11.358468168827642 -12.891037072890994 0.16861559691564756 0.8012911287289527 1.139857705841433 0.12406463061375572 0.07477682299138223 25.813088338313584 0.5271068009689535 1.9491880195818239 0.1065430522477497 1.2851769480763732e-13 12.891037072890994 0.3385665771124803 GPAADPSS(ph)PGTSGVGPAAGAGDSR ddPTM_A549_PD325901_60min_R1 1 GPAADPSSPGTSGVGPAAGAGDSR 24 0 A0A0U1RRM4 A0A0U1RRM4 1 GPAADPS(0.214)S(0.785)PGT(0.001)SGVGPAAGAGDSR 170.66 5.7696e-41 18665000.0 1509.3 1769.6 1997.8 1931.2 2405.1 2314.0 1819.4 1858.1 1976.5 2014.5 1817.0 True False 1662.5230249120657 1918.7304024117395 2133.3827217473327 2050.485837926577 2236.1740731445657 2295.155551204254 1888.6382626138823 1821.0387378487478 1893.434578463898 1887.30412620328 1593.5205189120006 1.043301925002621 1.2040826457143965 1.3387858495878866 1.2867646281245102 1.403291671870875 1.4403049875826544 1.1851985840153332 1.1427770877353298 1.1882084704856315 1.184361358265951 1.0 10.63800188071039 -9.691968155069448 0.5577442199728956 1.0072146171632883 1.2775556187604513 0.19640365172150243 0.11782331985804168 0.5635536178779694 0.37612905088268306 0.06543690218216135 0.030256986296176704 2.0325060403240062e-10 9.691968155069448 0.270341001597163 GPAAPPPT(ph)PVKPPR ddPTM_A549_PD325901_60min_R1 1 GPAAPPPTPVKPPR 14 1 E9PIE3;Q969G5 E9PIE3 PRKCDBP Protein kinase C delta-binding protein 1 GPAAPPPT(1)PVKPPR 50.07899999999999 0.010485 7922700.0 1758.5 1923.9 1810.3 2167.7 2045.1 2319.1 2263.6 2426.6 1966.7 2129.7 2255.3 True False 1937.02162546072 2086.0338049276374 1933.157844218238 2301.593905796108 1901.4592312119871 2300.2140184951545 2349.742536689449 2378.199559369126 1884.0464383834794 1995.230378543124 1977.912397524619 0.9793262977091026 1.054664406542137 0.9773728334164891 1.1636480506803943 0.961346535666436 1.1629504023403159 1.1879912071081509 1.2023786100665887 0.9525429138021411 1.008755686571447 1.0 10.949762814674404 -8.80435553963129 24.9990618053126 0.977589669628029 1.0859005298439786 0.21404116259705253 0.08404419058388357 140.3072213075098 81729.67194009527 0.014730503111350294 0.015681869257349757 1.5690777368083757e-09 8.80435553963129 0.1083108602159496 GPAAS(ph)TQEKNPRESTGNMVTGQTVCK ddPTM_A549_MK2206_60min_R1 2 GPAASTQEKNPRESTGNMVTGQTVCK 26 2 Q15021;E7EN77 Q15021 NCAPD2 Condensin complex subunit 1 1 GPAAS(0.316)T(0.316)QEKNPRES(0.316)T(0.052)GNMVTGQTVCK;GPAAS(0.311)T(0.311)QEKNPRES(0.311)T(0.054)GNMVT(0.012)GQT(0.001)VCK 48.20399999999999 0.0022045000000000003 6188400.0 1174.9 1359.29 1243.98 1388.46 1877.76 1571.9 1358.92 1038.94 1847.05 1905.05 2177.57 True False 1373.1943964528623 1428.4720550029865 1420.3950695870706 1728.632762330338 1601.5439914536314 1738.2374146572267 1605.8181738546048 1186.2129266203083 1428.696124132758 1474.6978818853138 1636.8192711253866 0.8389407558164498 0.8727121437303508 0.8677775821948169 1.0560926260000747 0.97844888541207 1.0619605018836995 0.9810601586762433 0.724706109920574 0.8728490367482449 0.9009533965661297 1.0 10.676679320557723 -7.040454417284545 0.007344853720340486 1.8366688335696608 2.3509063780332664e-05 0.0023820874981316242 0.09728824846402762 16310.643102589158 35.47110952808966 4317.053416913385 4553.012955315085 9.110570700497455e-08 7.040454417284545 -1.8366453245058805 GPAASTQEKNPRES(ph)TGNMVTGQTVCK ddPTM_A549_PD325901_60min_R1 2 GPAASTQEKNPRESTGNMVTGQTVCK 26 2 Q15021;E7EN77 Q15021 NCAPD2 Condensin complex subunit 1 1 GPAAS(0.036)T(0.036)QEKNPRES(0.732)T(0.181)GNMVT(0.015)GQT(0.001)VCK;GPAAS(0.102)T(0.102)QEKNPRES(0.693)T(0.102)GNMVT(0.002)GQTVCK 57.543 0.00053876 5883000.0 1573.4 1692.18 2042.85 2122.16 1881.94 2130.6000000000004 1914.7799999999997 1921.54 1949.5299999999997 1878.1799999999998 1986.76 True False 1733.1304097241396 1834.785947306226 2181.4900856549903 2253.241003424951 1749.7590267405453 2113.2490999981783 1987.6480007078205 1883.2133772810314 1867.5980337731949 1759.5913942677957 1742.4011151093046 0.9946793506358704 1.053021563976172 1.2520022322863016 1.2931815664521085 1.004222857508203 1.2128373206795209 1.1407522547316156 1.080815066605885 1.0718530983355326 1.0098658563802703 1.0 10.766861067131972 -9.142016467074958 0.7369092305417265 1.0135056529806141 1.1409518325238588 0.22211803436345112 0.09078866267524044 0.6149693360551653 0.722578095320984 0.028296773409996263 0.02278116441911125 7.210801375833908e-10 9.142016467074958 0.12744617954324466 GPAES(ph)PDEGITTTEGEGECEQTPEELEPVEK ddPTM_A549_MK2206_60min_R1 2 GPAESPDEGITTTEGEGECEQTPEELEPVEK 31 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GPAES(0.921)PDEGIT(0.025)T(0.025)T(0.025)EGEGECEQT(0.004)PEELEPVEK;GPAES(0.976)PDEGIT(0.008)T(0.007)T(0.007)EGEGECEQT(0.001)PEELEPVEK 58.49 0.00074391 8998800.0 897.31 681.5699999999999 704.89 743.49 1438.31 1022.91 639.46 1135.5 1436.27 1276.65 1567.83 True False 1048.7539908767703 716.2590017791542 804.8540013514927 925.6450833765347 1226.7365043177365 1131.1536572472955 755.6416046956895 1296.4606023229073 1110.957138251892 988.2538783280683 1178.49454109329 0.8899099268663906 0.6077745605123298 0.6829509796497056 0.7854470692056097 1.0409352453849232 0.9598293566959789 0.6411922824815806 1.1000989458298043 0.9426917983186044 0.838573148935645 1.0 10.202729360555319 -6.606999055756707 5.1267524227715455 0.9592168494291501 0.7175978081078064 0.321743603435231 0.1305626983886364 0.14047037925789213 6.344296833287472 0.017096072513745095 0.03629123340185447 2.471729519045921e-07 6.606999055756707 -0.2416190413213437 GPAESPDEGITT(ph)TEGEGECEQTPEELEPVEK ddPTM_A549_PD325901_60min_R1 2 GPAESPDEGITTTEGEGECEQTPEELEPVEK 31 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GPAES(0.001)PDEGIT(0.074)T(0.422)T(0.422)EGEGECEQT(0.081)PEELEPVEK;GPAES(0.003)PDEGIT(0.104)T(0.298)T(0.298)EGEGECEQT(0.298)PEELEPVEK 71.085 0.00022 8621600.0 559.03 627.32 495.98 582.0999999999999 730.02 482.85 538.21 786.55 699.88 462.48 597.51 True False 615.7823140638652 680.1864579797315 529.6401853700282 618.054994954982 678.7459136322801 478.91782968840744 558.6918760698128 770.8616432134619 670.466477498261 433.2789338726693 524.0200579279633 1.1751121063929129 1.298016073409992 1.0107250235120533 1.1794491176518012 1.2952670482044542 0.9139303399608493 1.0661650591753031 1.4710536964205896 1.2794672023612303 0.8268365443603533 1.0 9.03347822466603 -10.958350230491897 1.2877436873591204 1.0023748827957921 1.1942250868489168 0.278648218260773 0.15614718729952565 0.608396338456472 1.8291265063196869 0.09893880718191266 0.02423157539870601 1.1006513472171088e-11 10.958350230491897 0.1918502040531247 GPAESPDEGITTTEGEGECEQT(ph)PEELEPVEK ddPTM_A549_MK2206_60min_R1 1 GPAESPDEGITTTEGEGECEQTPEELEPVEK 31 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GPAESPDEGIT(0.007)T(0.009)T(0.036)EGEGECEQT(0.948)PEELEPVEK 68.934 0.00041387 1520400.0 220.27 515.83 0.0 388.29 596.59 0.0 371.32 476.56 606.91 635.88 732.23 True False 257.446190915543 542.0835437119314 0.0 483.42106743100067 508.83240129799435 0.0 438.7840375560681 544.1138394037906 469.4458540361181 492.2342663621601 550.3970824800771 0.4677462855644077 0.9848953800214837 0.0 0.878313281118272 0.9244823737168206 0.0 0.7972135963710362 0.9885841635497515 0.8529221338180163 0.8943257187050545 1.0 9.104329012462482 -7.989781134525661 24.980515796804482 0.9310511904278467 0.5563006990776437 0.26048538330488746 0.311191691859944 217.2686856725634 531121.5816536448 0.0453249854375942 0.06259037138274579 1.0238088172771068e-08 7.989781134525661 -0.374750491350203 GPAESPDEGITTTEGEGECEQT(ph)PEELEPVEK ddPTM_A549_PD325901_60min_R1 2 GPAESPDEGITTTEGEGECEQTPEELEPVEK 31 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GPAESPDEGITT(0.001)T(0.007)EGEGECEQT(0.991)PEELEPVEK;GPAESPDEGITT(0.001)T(0.003)EGEGECEQT(0.996)PEELEPVEK 103.73 2.7563e-14 5456500.0 1823.88 1413.41 1273.67 1158.1 1716.42 1457.1100000000001 1807.65 1623.81 1015.62 1670.3600000000001 1724.9 True False 2009.038954930508 1532.5230210628263 1360.1089053999035 1229.6332067640687 1595.8645805275448 1445.2437792632809 1876.441109934036 1591.4218356956972 972.9370233136879 1564.8931845345796 1512.7482350419968 1.3280722518078054 1.0130720932688977 0.8990979952206947 0.8128472261809856 1.054943938165124 0.9553762786067029 1.2404186410317921 1.052007068216157 0.6431585909513073 1.0344703423112143 1.0 10.562956186109762 -8.718779953484958 24.979432954635783 0.8314914236339968 1.034775563436957 0.11076967249100356 0.16747225596013926 163.1951284811313 95559.50426122596 0.0310471642435666 0.03520404623647304 1.910821180232773e-09 8.718779953484958 0.20328413980296034 GPAFNMAS(ph)PESDFGINLK ddPTM_A549_MK2206_60min_R1 3 GPAFNMASPESDFGINLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPAFNMAS(0.857)PES(0.143)DFGINLK;GPAFNMAS(0.846)PES(0.154)DFGINLK;GPAFNMAS(0.998)PES(0.002)DFGINLK 80.979 9.021700000000001e-05 5410000.0 2509.38 4216.39 2996.9900000000002 2298.89 4214.08 2994.34 3185.57 3404.97 4725.41 4276.46 4821.46 True False 2932.901995549306 4430.986241342208 3422.0082474008864 2862.118153201092 3594.194414358022 3311.1990713179725 3764.346834314024 3887.6349247832914 3655.11217992917 3310.40471586954 3624.1584164735045 0.8092642921506651 1.2226248778754514 0.944221486523947 0.7897331805892973 0.9917321489095836 0.9136463395934944 1.0386816473593696 1.0727000528211357 1.0085409521048987 0.9134271561701589 1.0 11.82343030341975 -7.769246468439084 24.972710206421816 1.012740506285379 0.9528172113057919 0.06638227584576484 0.11177649436590867 387.11051020842416 1238258.740712399 0.016073334466372335 0.0224290315968115 1.70119278272629e-08 7.769246468439084 -0.05992329497958704 GPAFNMAS(ph)PESDFGINLK ddPTM_A549_PD325901_60min_R1 4 GPAFNMASPESDFGINLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPAFNMAS(0.936)PES(0.064)DFGINLK;GPAFNMAS(0.978)PES(0.022)DFGINLK;GPAFNMAS(0.924)PES(0.076)DFGINLK;GPAFNMAS(0.65)PES(0.35)DFGINLK 103.43 2.2716e-09 13236400.0 10422.5 11730.3 10005.76 11448.3 14459.0 12350.1 13091.599999999999 13102.4 12498.5 11452.829999999998 11995.199999999999 True False 11480.58452736102 12718.853548491426 10684.811043122736 12155.435490024258 13443.449720842074 12249.524880262605 13589.8080019984 12841.062353366038 11973.23150970454 10729.696359247808 10519.866443837764 1.091324171143448 1.2090318462114855 1.0156793434750868 1.155474316610223 1.2779106838107115 1.164418288545671 1.2918232445773037 1.220648800240992 1.1381543267327425 1.019946062673919 1.0 13.360828768396772 -10.021210438133531 0.8745149596253755 1.0130276839377994 1.1770133790844122 0.4107827084831154 0.07529396308782338 0.38518971353816756 0.5948077068927519 0.032248877994465595 0.015392815730574381 9.523345968494043e-11 10.021210438133531 0.16398569514661276 GPAGDATVAS(ph)EKESVM ddPTM_A549_MK2206_60min_R1 2 GPAGDATVASEKESVM 16 1 Q15758;M0QXM4;Q15758-3;Q15758-2 Q15758 SLC1A5 Neutral amino acid transporter B(0);Amino acid transporter 1 GPAGDAT(0.007)VAS(0.975)EKES(0.018)VM;GPAGDATVAS(1)EKESVM 160.48 1.6668999999999998e-20 10266000.0 3642.6 3326.1 3829.1 3767.2 5372.4 4359.2 4385.9 4384.5 5747.1 5608.6 6347.1 True False 4257.381826980333 3495.3842830782505 4372.123957745185 4690.164169116037 4582.127076775246 4820.487650597228 5182.761257990842 5006.016301968107 4445.391026232845 4341.613364658128 4770.939898951557 0.892357044345899 0.7326406027136042 0.9164072594387505 0.9830692208356532 0.9604243972518279 1.010385322954196 1.0863187061169615 1.0492725559314233 0.9317642058768645 0.9100121687997421 1.0 12.220057797010153 -5.976152407580853 4.857003070935807 0.9839495721182526 0.8123016607729081 0.5812739048821094 0.058325557760107886 0.0951628560682186 5.84259388352805 0.007991227224522605 0.02519645052291548 1.0564467038079647e-06 5.976152407580853 -0.17164791134534452 GPAGDATVAS(ph)EKESVM ddPTM_A549_PD325901_60min_R1 1 GPAGDATVASEKESVM 16 1 Q15758;M0QXM4;Q15758-3;Q15758-2 Q15758 SLC1A5 Neutral amino acid transporter B(0);Amino acid transporter 1 GPAGDAT(0.001)VAS(0.99)EKES(0.009)VM 91.616 5.9795e-06 51204000.0 8560.5 8642.0 8224.4 9528.7 10369.0 9904.9 10017.0 9071.7 11015.0 10320.0 10001.0 True False 9429.55565809298 9370.291669101633 8782.55724133485 10117.266157752169 9640.717211108062 9824.237778359124 10398.20241651273 8890.757826889027 10552.077855694328 9668.393438777777 8770.940401562424 1.0750906090313 1.068333752151872 1.001324469126521 1.1534984499438525 1.099165741610865 1.1200894463504814 1.1855287962805483 1.0136607273383431 1.203072575184141 1.1023211874812744 1.0 13.09851581831682 -6.260667875168303 24.999859304898788 1.1033853665003137 1.0502580271956503 0.15972712448718296 0.061475270535184895 146.40564008269126 4744025.685047606 0.01107746173372694 0.027509499318303376 5.48696417731694e-07 6.260667875168303 -0.0531273393046634 GPAGDATVASEKES(ph)VM ddPTM_A549_MK2206_60min_R1 5 GPAGDATVASEKESVM 16 1 Q15758;M0QXM4;Q15758-3;Q15758-2 Q15758 SLC1A5 Neutral amino acid transporter B(0);Amino acid transporter 1 GPAGDATVASEKES(1)VM;GPAGDATVASEKES(1)VM;GPAGDATVASEKES(1)VM;GPAGDATVAS(0.002)EKES(0.998)VM;GPAGDATVAS(0.004)EKES(0.996)VM 123.29 4.151699999999999e-15 39575100.0 10954.4 11053.599999999999 10676.5 10574.000000000002 14062.400000000001 12175.899999999998 10380.600000000002 11326.5 15592.5 17242.2 16683.2 True False 12803.234910633431 11616.1810262571 12190.58824132732 13164.630474684902 11993.839588348634 13464.345656291698 12266.620651337176 12932.06606095148 12060.823646105964 13347.17504477203 12540.30100710381 1.0209671126219917 0.9263079905081053 0.9721128890304638 1.049785843834803 0.9564235803872956 1.0736860023267734 0.9781759340855056 1.0312404824753205 0.961765083571261 1.0643424776814483 1.0 13.614284357373936 -2.7397627490482503 16.509237465353266 0.9900824078344374 0.9877394189834287 0.0 0.047940741390073364 0.0 0.0 0.005187052501851506 0.0 0.0018206952154897456 2.7397627490482503 -0.0023429888510086982 GPAGDATVASEKES(ph)VM ddPTM_A549_PD325901_60min_R1 4 GPAGDATVASEKESVM 16 1 Q15758;M0QXM4;Q15758-3;Q15758-2 Q15758 SLC1A5 Neutral amino acid transporter B(0);Amino acid transporter 1 GPAGDATVASEKES(1)VM;GPAGDATVASEKES(1)VM;GPAGDATVASEKES(1)VM;GPAGDATVAS(0.001)EKES(0.999)VM 159.4 1.9267e-20 77053900.0 17154.8 18870.1 20460.9 20496.4 21223.3 20393.1 20070.9 22850.0 21786.9 21913.300000000003 24371.100000000002 True False 18896.34266730371 20460.34955162172 21849.499715386926 21762.416077298218 19732.648624410245 20227.025354910744 20834.709082717898 22394.238824521763 20871.272358985632 20529.690498252818 21373.60920113168 0.8840969482263761 0.957271622171252 1.022265332437633 1.0181909790016161 0.9232249190448121 0.9463551599811123 0.9747866580069571 1.047751861362565 0.9764973319471262 0.9605158541574635 1.0 14.383542925212964 -8.007557909891663 24.597306464262342 0.9938749060403336 0.9623462281348634 0.14766170027118442 0.04155924280986847 507.9707294195078 1653203.1198290775 0.0065159409570476725 0.00880356202841641 9.827478222573378e-09 8.007557909891663 -0.031528677905470204 GPAGEAGAS(ph)PPVR ddPTM_A549_MK2206_60min_R1 1 GPAGEAGASPPVR 13 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GPAGEAGAS(1)PPVR 148.52 1.1665e-12 105940000.0 11189.0 11414.0 10955.0 9841.9 13623.0 10488.0 11131.0 10794.0 14717.0 15102.0 15037.0 True False 13077.42965521411 11994.923846864247 12508.583729100445 12253.165941819683 11619.074746278982 11597.833198629054 13153.358618002241 12324.082555238623 11383.622998219756 11690.447711205486 11302.897899912487 1.1569979461033053 1.0612255328748141 1.1066705051982548 1.0840729563623286 1.027973078158031 1.02609377712939 1.1637156005898348 1.0903471538333585 1.0071419824386714 1.0342876503640717 1.0 13.464405085804103 -8.770523719395442 8.341268752513665 1.003307775901429 1.0874064126185798 0.3782198979347696 0.04265861117674638 0.08845732180561955 44.987299729912934 0.0070842009538301 0.007695913265852655 1.6961969603619667e-09 8.770523719395442 0.08409863671715079 GPAGEAGAS(ph)PPVR ddPTM_A549_PD325901_60min_R1 1 GPAGEAGASPPVR 13 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GPAGEAGAS(1)PPVR 153.32 1.4462999999999999e-13 162800000.0 15716.0 14718.0 14047.0 13808.0 17617.0 15377.0 14321.0 15219.0 16011.0 15831.0 16619.0 True False 17311.476750492286 15958.337512825501 15000.313891473019 14660.888799756727 16379.642695350629 15251.774810228108 14865.993491751899 14915.445105925468 15338.113349752313 14831.427958264632 14574.968356520938 1.1877539852597359 1.094914041832937 1.0291832904571472 1.0058950689383381 1.1238201205440195 1.046436221139675 1.0199674625777664 1.0233603765768862 1.0523599759919848 1.0175958942393828 1.0 13.831205130766653 -2.000000077183806 0.8248665711465278 1.0299424598852673 49.45114962568334 0.649406192245127 0.032803583860886484 262.666535335959 0.769984207522202 0.005441267737428022 23834.510017077573 0.009999998222777346 2.000000077183806 48.42120716579807 GPAGEAGAS(ph)PPVRR ddPTM_A549_MK2206_60min_R1 6 GPAGEAGASPPVRR 14 1 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR 130.29 4.111800000000001e-09 854871600.0 11983.2 13469.8 13329.400000000001 12061.900000000001 16049.7 12318.6 11369.699999999999 11496.3 17824.899999999998 18762.100000000002 20096.5 True False 14005.671198888364 14155.355285832493 15219.709352685659 15017.066041479264 13688.810390909033 13622.146075575112 13435.4273182194 13125.935730942163 13787.588610516232 14523.728579155637 15105.984414816196 0.9271604427945374 0.937069369140133 1.0075284691647053 0.9941136988563474 0.9061845964492605 0.9017714901264091 0.8894109082385728 0.8689228964163389 0.9127236088627988 0.9614552868802464 1.0 13.882832583085474 -4.19157085101665 18.401843820253035 0.9445663529629568 0.9417925103663068 0.0 0.04594367977185959 0.0 0.0 0.007123300743048714 0.0 6.43323104381326e-05 4.19157085101665 -0.0027738425966499225 GPAGEAGAS(ph)PPVRR ddPTM_A549_PD325901_60min_R1 4 GPAGEAGASPPVRR 14 1 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR 167.69 8.0537e-23 1122470000.0 22040.9 22316.0 22258.1 21411.299999999996 25220.8 23677.199999999997 20612.100000000002 23928.1 23270.3 24944.1 26366.399999999998 True False 24278.475942347006 24196.64763800881 23768.668514828474 22733.827372409538 23449.378015036582 23484.380733350623 21396.504744873917 23450.83527426867 22292.330215648075 23369.125269013264 23123.4999503805 1.0499481477477417 1.0464093969308763 1.0279009910191972 0.9831482007997431 1.0140929385843565 1.0156066678376767 0.9253142816090795 1.0141559592877627 0.9640551933523909 1.0106223244387673 1.0 14.497072158828562 -6.004004181056916 0.8128693358592841 0.9829109746344845 1.0646149934815614 0.41554378810576376 0.026380114998249618 0.6985184490620713 0.5974014559053724 0.004041778707617863 0.04068782545152001 9.908224059624168e-07 6.004004181056916 0.0817040188470769 GPAKAS(ph)PQPALTVK ddPTM_A549_MK2206_60min_R1 2 GPAKASPQPALTVK 14 1 Q8N9M1-2;Q8N9M1;A0A2R8Y6U9;J3QS80;Q8N9M1-3 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 GPAKAS(1)PQPALTVK;GPAKAS(1)PQPALTVK 108.56 4.1793e-06 15640400.0 6314.200000000001 9127.3 9671.4 6873.0 11424.6 8313.6 6925.700000000001 8515.1 10839.900000000001 11765.900000000001 13062.2 True False 7379.88259263142 9591.84058414964 11042.949947751886 8556.885308540694 9744.056474076113 9193.339633878953 8184.010042287141 9722.141501400072 8384.679957763294 9107.975018227562 9818.49524161979 0.7516307143836775 0.9769155403254279 1.1247089982731502 0.8715067938586724 0.9924185156979923 0.936328776217067 0.8335299698059432 0.9901865063995466 0.8539679198724187 0.9276345095753175 1.0 13.261286222257215 -7.514517020788085 24.53997225004635 0.9261438596501229 0.952671017479732 0.006914365363017039 0.09634911566814845 1561.6497198929583 4583121.640132972 0.015096509569800787 0.023038932787465206 3.058320383041447e-08 7.514517020788085 0.026527157829609127 GPAKAS(ph)PQPALTVK ddPTM_A549_PD325901_60min_R1 2 GPAKASPQPALTVK 14 1 Q8N9M1-2;Q8N9M1;A0A2R8Y6U9;J3QS80;Q8N9M1-3 Q8N9M1-2 C19orf47 Uncharacterized protein C19orf47 1 GPAKAS(0.882)PQPALT(0.118)VK;GPAKAS(0.972)PQPALT(0.028)VK 70.09100000000001 0.000701 26861000.0 11005.599999999999 11643.7 12021.599999999999 11352.599999999999 14486.2 14562.2 12154.1 13007.4 13607.599999999999 12109.7 13647.7 True False 12122.88041010549 12624.955462568701 12837.458067753396 12053.824318374718 13468.739286676975 14443.610271282025 12616.630926478712 12747.957202892097 13035.719893703683 11345.091475345667 11969.119419898354 1.0128464747332633 1.054794009455703 1.072548248320712 1.0070769532414845 1.1252907431339971 1.206739590823189 1.0540985083250056 1.065070600072629 1.0891126937903328 0.9478635041843382 1.0 13.547029395216226 -4.283440025797223 16.15913049514405 1.0586035665465998 1.0742707046197617 0.0 0.0660852037874771 0.0 0.0 0.008221454904034593 0.0 5.206669057006659e-05 4.283440025797223 0.01566713807316189 GPALTPIRDEEWGGHS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GPALTPIRDEEWGGHSPR 18 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 GPALT(0.001)PIRDEEWGGHS(0.999)PR;GPALT(0.001)PIRDEEWGGHS(0.999)PR 85.884 1.9505e-05 24118000.0 1733.4099999999999 1770.1 1457.39 1511.62 2400.77 2034.7600000000002 2182.56 1965.6599999999999 2878.8 2921.7 3132.3 True False 2025.9672301943617 1860.1905292916058 1664.0698166091904 1881.9669678592002 2047.6199132807892 2250.0769526356257 2579.102900485759 2244.298324581281 2226.75639649895 2261.6859407912225 2354.4634629178604 0.8604793669992241 0.7900698221013345 0.7067724102827772 0.7993188246492895 0.8696758074738593 0.9556644169993321 1.0954100333710448 0.9532100879577665 0.94575958878519 0.9605950469871978 1.0 11.201182619414114 -7.055999874423421 2.358538384080929 0.9812793918874895 0.783194529005909 0.7681669270553735 0.05066500970920378 0.11095598909445249 1.2209885428145215 0.007915203424197274 0.015406335083617946 8.790227710009494e-08 7.055999874423421 -0.19808486288158045 GPALTPIRDEEWGGHS(ph)PR ddPTM_A549_PD325901_60min_R1 2 GPALTPIRDEEWGGHSPR 18 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR 177.91 3.4963999999999996e-31 28612000.0 2498.5 2345.3999999999996 2434.2 2896.6 2553.9 3041.7 2485.0 2580.8 3131.0 2882.8 3738.3 True False 2752.1458807015124 2543.055089182016 2599.3994500337153 3075.516403344098 2374.522874476698 3016.9294036724204 2579.568034844177 2529.3239194015678 2999.4149583457947 2700.779516018276 3278.512799036174 0.8394494849953296 0.7756733754187662 0.7928593265818251 0.938082780780434 0.7242682948118325 0.9202127881151922 0.7868104207500808 0.7714851441620558 0.9148705959688707 0.8237819040426679 1.0 11.67882581169422 -9.192087868891498 1.4016927625042286 0.9753299573826292 0.8198505277173345 0.10422621529916498 0.0779398261447374 0.19538217448913656 0.7937678342546614 0.013334754626897647 0.011991808613265759 6.425576982927246e-10 9.192087868891498 -0.1554794296652947 GPAPGPPPAGSALGGAPPVPS(ph)RPGASPDPFGPPPQVPSRPNR ddPTM_A549_PD325901_60min_R1 2 GPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNR 42 2 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 GPAPGPPPAGS(0.003)ALGGAPPVPS(0.491)RPGAS(0.491)PDPFGPPPQVPS(0.016)RPNR;GPAPGPPPAGS(0.001)ALGGAPPVPS(0.498)RPGAS(0.498)PDPFGPPPQVPS(0.003)RPNR 72.141 3.6531000000000002e-06 8667900.0 2598.3 2514.8 2833.7 2871.7 3656.9 3387.5 2691.8999999999996 3696.9 3702.9 2891.7 3620.3 True False 2862.0775032326383 2726.731021691367 3026.0119224223736 3049.078386896102 3400.051959620123 3359.913323122045 2794.3417275642014 3623.1624293380555 3547.2799901816147 2709.1175684993896 3175.0260509725454 0.9014343370051885 0.8588058736891747 0.9530668012930076 0.9603317698644191 1.0708737204151915 1.058231733907464 0.8801004094779833 1.141144157928481 1.1172443731902748 0.8532583748941389 1.0 11.632552713855462 -6.31053800311997 1.2356156181316644 1.0518106584277764 0.8754049332442767 0.17851844959277707 0.08963257777866765 0.3524623699821523 0.9684741300640741 0.01096835586037208 0.04796889783939693 4.891724580213343e-07 6.31053800311997 -0.17640572518349973 GPAPGPPPAGSALGGAPPVPSRPGAS(ph)PDPFGPPPQVPSRPNR ddPTM_A549_PD325901_60min_R1 1 GPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNR 42 2 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 GPAPGPPPAGS(0.002)ALGGAPPVPS(0.189)RPGAS(0.806)PDPFGPPPQVPS(0.003)RPNR 75.329 2.0009000000000001e-07 6055700.0 813.02 585.58 884.69 728.28 1036.6 811.64 528.71 700.11 893.79 957.21 1024.1 True False 895.55719188631 634.9288816931887 944.7303834731447 773.2642015561144 963.7927920758627 805.0302729383848 548.8303483712132 686.14575682433 856.2271145384505 896.7715972415198 898.1421923047772 0.9971218361183616 0.7069358138758176 1.0518717320793212 0.860959665609066 1.0730959978648988 0.8963283095213996 0.6110728936615553 0.763961166397906 0.9533313565207688 0.9984739665110931 1.0 9.810800057785004 -8.966201613216155 15.037900715504874 0.9794189393293166 0.8687956691867554 0.12774799017745897 0.1338041747545127 4.0322152307676165 1793.446047665061 0.0234243262367497 0.024677342382676264 1.0809320320119051e-09 8.966201613216155 -0.11062327014256113 GPAS(ph)DS(ph)ETEDASR ddPTM_A549_MK2206_60min_R1 1 GPASDSETEDASR 13 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 2 GPAS(0.748)DS(0.732)ET(0.52)EDASR 85.45 0.00034433 11849000.0 715.97 643.68 689.92 458.23 536.15 578.28 608.33 564.79 649.45 690.46 783.73 True False 836.808232214108 676.4405626204289 787.76103024929 570.4963705707263 457.28304523361015 639.4732057688034 718.8556866489362 644.8507120968338 502.35061195853933 534.4846064547037 589.1082111523847 1.4204660813964631 1.1482450079879363 1.337209387572973 0.9684067540914922 0.7762292844961292 1.0854936218218671 1.2202438754719542 1.0946218366832952 0.8527306230817351 0.907277468445349 1.0 9.20238885159595 -2.000000235222582 0.3982553293760764 0.9498584369032259 8.509212156725157 0.4545789539777183 0.14062424013076308 40.6646752000684 0.47406849787661587 0.03374553256038368 243.90757799702837 0.009999994583801361 2.000000235222582 7.559353719821932 GPAS(ph)DSET(ph)EDASR ddPTM_A549_PD325901_60min_R1 1 GPASDSETEDASR 13 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 2 GPAS(0.995)DS(0.057)ET(0.947)EDAS(0.001)R 200.05 2.5003e-30 24989000.0 2611.8 3141.0 3407.8 3586.3 3352.4 2368.7 2871.3 3033.2 2917.1 2888.3 3557.0 True False 2876.9480132944623 3405.70309334046 3639.0738007661234 3807.8176059217512 3116.938989152154 2349.4100925399807 2980.5688927356487 2972.700446500633 2794.5044314885067 2705.9322450796376 3119.5115496807825 0.9222431036002602 1.091742421562428 1.1665524370757683 1.2206454585210311 0.9991753322635104 0.753133961879511 0.9554601242109997 0.9529377914323887 0.8958147411810244 0.8674217748469416 1.0 11.607104435538124 -6.991069977572182 24.67572377229687 0.9353993634544567 1.1051041626003664 0.4769159796515441 0.09294877808686483 129.2003492052865 357006.94609751616 0.013540046982444657 0.025560960568692278 1.0207749936809118e-07 6.991069977572182 0.16970479914590963 GPAS(ph)DSETEDAS(ph)R ddPTM_A549_PD325901_60min_R1 1 GPASDSETEDASR 13 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 2 GPAS(0.962)DS(0.044)ET(0.116)EDAS(0.878)R 184.0 4.3047e-25 43147000.0 4647.5 5307.4 4837.7 4934.0 6008.6 4484.7 4566.6 4196.3 4523.2 5002.8 5048.6 True False 5119.310778691326 5754.673224321919 5166.015413453337 5238.761974072976 5586.576664544692 4448.178090097544 4740.384461939403 4112.601504566333 4333.105633851708 4686.922354216812 4427.654205712231 1.1562128704826975 1.2997115305205333 1.1667612630608162 1.1831913086876376 1.2617463796827912 1.0046353855634964 1.0706311382274865 0.9288443300880542 0.9786458997320652 1.0585565485602044 1.0 12.11232683849239 -7.271637571455047 23.676162976058897 0.9922382006680202 1.2140296744122825 0.7873327596385538 0.0531784316537739 92.73093229223231 215284.45466788957 0.00691844091247831 0.01114469228204747 5.3501065161183244e-08 7.271637571455047 0.22179147374426234 GPAS(ph)DSETEDASR ddPTM_A549_MK2206_60min_R1 2 GPASDSETEDASR 13 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 1 GPAS(0.996)DS(0.003)ET(0.001)EDASR;GPAS(0.99)DS(0.01)ETEDASR 91.914 0.00018032 32961000.0 916.22 711.39 667.0899999999999 616.55 753.38 682.54 449.02 430.86 832.7 799.69 1062.96 True False 1070.8555365716577 747.5967124076356 761.6933929571526 767.6047776779816 642.5587999964512 754.7659297666162 530.6011217909773 491.93572445341067 644.0947795486576 619.0394735911744 798.9976957964335 1.3402485917111924 0.935668170685321 0.9533111258824141 0.9607096262184339 0.8042060739060761 0.94464093418226 0.664083419242003 0.6156910427170302 0.8061284568619812 0.7747700360689046 1.0 9.642047532392493 -2.3610977360024377 0.9958448917849705 0.8666859323398771 199.97845910734674 0.5879521812889208 0.11975475392647328 452.2106654449852 1.3646677940295606 0.020486297823229686 204418.8616725827 0.004354138747421569 2.3610977360024377 199.11177317500685 GPAS(ph)DSETEDASR ddPTM_A549_PD325901_60min_R1 2 GPASDSETEDASR 13 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 1 GPAS(0.999)DS(0.001)ETEDASR;GPAS(0.998)DS(0.001)ET(0.001)EDASR 127.76 5.4195e-08 36867000.0 1402.65 1177.1599999999999 1315.77 1801.58 1374.96 1164.32 1377.5700000000002 1299.0700000000002 1295.88 1216.87 1573.7199999999998 True False 1545.0459954236455 1276.3634044433793 1405.0660645677694 1912.8595049149553 1278.3875529544928 1154.838163949065 1429.9941801852292 1273.1590297493005 1241.4186701440908 1140.0366205276666 1380.1624166330166 1.1194667937653828 0.9247921759506675 1.0180439980357578 1.3859669571219617 0.9262587776250208 0.836740770529281 1.0361057241898963 0.9224704385555167 0.8994728846280289 0.8260162766269565 1.0 10.430622337088208 GPAS(ph)PLEAK ddPTM_A549_MK2206_60min_R1 2 GPASPLEAK 9 0 Q13099-3;Q13099;Q13099-1 Q13099-3 IFT88 Intraflagellar transport protein 88 homolog 1 GPAS(1)PLEAK;GPAS(1)PLEAK 94.616 0.00094307 13337700.0 7676.9 8353.0 7375.6 7110.6 9747.0 7180.0 6401.4 7057.0 9797.599999999999 10180.0 11049.099999999999 True False 8972.573037815104 8778.132021452338 8421.570986066012 8852.697319206965 8313.22921177283 7939.782834301728 7564.4515189362655 8057.351361156103 7578.459243552209 7880.330929682941 8305.303530353329 1.0803425792956405 1.0569309103961062 1.0139991820031335 1.0659089444296745 1.0009542916030143 0.9559894837418361 0.9107977199497312 0.9701453212045729 0.9124843199114003 0.9488311776785467 1.0 13.019817179367921 -7.011484750746458 2.9147642769446716 0.954585041969212 1.051646407508196 0.750910936435716 0.02801685421778164 0.13826817210595307 2.383791161793826 0.005440847814597362 0.010472663088168337 9.739019810601512e-08 7.011484750746458 0.09706136553898392 GPAS(ph)PLEAK ddPTM_A549_PD325901_60min_R1 1 GPASPLEAK 9 0 Q13099-3;Q13099;Q13099-1 Q13099-3 IFT88 Intraflagellar transport protein 88 homolog 1 GPAS(1)PLEAK 76.143 0.0020163 7848900.0 4414.3 3911.2 3377.8 3680.7 4500.6 3684.2 4233.1 4375.4 5383.7 4978.1 5508.9 True False 4862.436486364098 4240.8105503575935 3607.037820361469 3908.048479523794 4184.493382227116 3654.197096692618 4394.192936941202 4288.129214565102 5157.441811321063 4663.781916432137 4831.340223794339 1.0064363636443174 0.8777710436271102 0.7465915570583948 0.8088953165162462 0.8661144089208406 0.7563526738803668 0.9095184220932759 0.8875651508552588 1.0674971275921896 0.9653184624554119 1.0 12.238207735837788 -8.639035307713849 4.011513362777018 1.031796819750071 0.8478888435523602 0.4675110259412609 0.07230579082524863 0.11680120323859061 3.485087358483695 0.012282378476140263 0.013909208708294079 2.29596198107568e-09 8.639035307713849 -0.18390797619771093 GPAS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 GPASPQR 7 0 Q6NT89;H0YES3 Q6NT89 TRNP1 TMF-regulated nuclear protein 1 1 GPAS(1)PQR;GPAS(1)PQR 86.744 0.013012000000000001 63413000.0 6735.5 7752.4 6497.2 4854.9 9222.400000000001 6959.700000000001 6344.0 7021.9 10352.400000000001 12232.6 12960.900000000001 True False 7872.287732835344 8146.964046822357 7418.600657664206 6044.35071794474 7865.7971768394045 7696.170834525039 7496.622681933905 8017.275828666854 8007.597929385755 9469.247164090333 9742.35082735757 0.808048064819131 0.8362421135507464 0.7614795226663339 0.6204201455126778 0.8073818440977715 0.7899706108830903 0.7694880645113479 0.8229303143296257 0.8219369299347709 0.9719673754202802 1.0 13.25005422100979 -10.265781401305667 0.4443216794290235 1.032501917756327 0.7634707423998657 0.6922229508243944 0.0536242418108351 0.6062666728317669 0.19791694712807487 0.07093004565081139 0.016443813807429045 5.422737709356158e-11 10.265781401305667 -0.26903117535646137 GPAS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 GPASPQR 7 0 Q6NT89;H0YES3 Q6NT89 TRNP1 TMF-regulated nuclear protein 1 1 GPAS(1)PQR;GPAS(1)PQR 80.455 0.015861 96953000.0 9610.3 9669.2 7836.299999999999 8940.3 9547.2 7431.8 5972.200000000001 7007.4 8310.0 9767.900000000001 10947.2 True False 10585.930581271066 10484.057418060358 8368.118441499957 9492.522026105526 8876.637608051975 7371.277884805436 6199.475339113237 6867.6319098010445 7960.759598803431 9151.153126999763 9600.763800018412 1.10261337553693 1.092002431935702 0.8716096568779151 0.9887257122279501 0.9245761892439174 0.7677803598075498 0.6457273054776483 0.7153214111764601 0.8291798199210112 0.9531692808630718 1.0 13.228933470356813 -5.75898650514602 19.655452695702206 0.8784764322864912 1.0973093714274367 0.4115694283882546 0.1087975745443457 3.876687185459841 31023.483027273796 0.01780516140926568 0.06266031211151574 1.7418609974838907e-06 5.75898650514602 0.21883293914094548 GPAS(ph)PTRPAAPR ddPTM_A549_MK2206_60min_R1 4 GPASPTRPAAPR 12 1 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 GPAS(0.884)PT(0.116)RPAAPR;GPAS(0.759)PT(0.241)RPAAPR;GPAS(0.992)PT(0.008)RPAAPR;GPAS(0.876)PT(0.124)RPAAPR 127.36 2.638e-08 253915000.0 14648.300000000001 13988.5 12857.8 12960.6 18636.2 18197.7 16748.399999999998 14688.699999999999 21801.5 23739.700000000004 21270.9 True False 17120.574923449196 14700.454900285651 14681.229381289599 16135.94758182345 15894.83966722487 20123.368535344387 19791.367485198894 16770.868207257136 16863.495059841534 18376.885282062303 15988.748483025105 1.0707889327063795 0.9194249891348778 0.9182225486176313 1.0092064178102884 0.9941265686992364 1.2585956028208785 1.237830935061049 1.0489168820850732 1.0547101343013263 1.1493635853720903 1.0 13.964769396041472 -7.022062842080992 24.889464306212503 1.063205650498087 0.9746192822802558 0.2518216969481355 0.09392336496194133 1105.2202788714599 1246817.3144240158 0.015133950724213405 0.026362187451299958 9.504672518174806e-08 7.022062842080992 -0.08858636821783106 GPAS(ph)PTRPAAPR ddPTM_A549_PD325901_60min_R1 3 GPASPTRPAAPR 12 1 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 GPAS(0.847)PT(0.153)RPAAPR;GPAS(0.851)PT(0.149)RPAAPR;GPAS(0.984)PT(0.016)RPAAPR 133.04 1.5024e-08 383990000.0 20878.0 20787.4 21114.8 21621.9 23456.2 22311.4 21502.6 20330.4 23592.2 22852.1 26033.3 True False 22997.519190428735 22539.22715138665 22547.777301607053 22957.43565610225 21808.717431497047 22129.703355721103 22320.893209674206 19924.89422310973 22600.70187808548 21409.21450603622 22831.36913868563 1.007277270615435 0.9872043596893201 0.9875788510379758 1.0055216363351163 0.9552084808853712 0.9692674679865948 0.9776414666194297 0.8726981768845764 0.9898969151083759 0.9377104971668255 1.0 14.478729756429871 -8.977910732679153 24.999986563960334 0.9955428061465966 0.9697565931578194 0.0 0.038574407126087985 268.5640506801011 303956.5926252319 0.006146532535739896 0.0063106021736108854 1.0521781221838365e-09 8.977910732679153 -0.025786212988777257 GPAS(ph)PTRPAAPRPAEAPLLDL ddPTM_A549_PD325901_60min_R1 4 GPASPTRPAAPRPAEAPLLDL 21 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 GPAS(0.802)PT(0.198)RPAAPRPAEAPLLDL;GPAS(0.832)PT(0.168)RPAAPRPAEAPLLDL;GPAS(0.767)PT(0.233)RPAAPRPAEAPLLDL;GPAS(0.823)PT(0.177)RPAAPRPAEAPLLDL 89.66799999999999 2.2927e-05 145012700.0 4423.77 5160.51 4080.7799999999997 5168.61 5374.6900000000005 4647.9 5227.99 5338.71 5752.58 5441.46 6071.3 True False 4872.86787379265 5595.404288511422 4357.726270523615 5487.8633009350115 4997.190316073916 4610.049043406334 5426.944020315899 5232.225240913027 5510.819067735816 5097.885286954627 5324.568589141674 0.9151667017173614 1.0508652851091185 0.8184186563790862 1.0306681581915091 0.9385155308665989 0.8658070538911921 1.0192269907806235 0.9826571211014237 1.0349794495978435 0.9574269166802886 1.0 12.37844892370587 -7.825753602390794 24.999977350628825 1.014044206301262 0.9407624279875626 0.16757487652838132 0.0648811931933895 60.95574613076188 23693.96546873495 0.008953960773959099 0.012371677217041022 1.4936415889711065e-08 7.825753602390794 -0.07328177831369942 GPASDS(ph)ET(ph)EDASR ddPTM_A549_MK2206_60min_R1 1 GPASDSETEDASR 13 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 2 GPAS(0.535)DS(0.589)ET(0.876)EDASR 124.48 6.395499999999999e-06 14014000.0 1414.2 1193.3 925.6 1182.1 1372.6 1507.3 1425.5 1416.4 1342.2 1766.0 1699.3 True False 1652.8823861295748 1254.0338730036008 1056.8639981428905 1471.7145530664857 1170.692358272225 1666.8014855352365 1684.4948980291251 1617.1790375430787 1038.1938430529697 1367.0593734597323 1277.3169117058783 1.294026855028579 0.9817719169855955 0.8274093832605964 1.152192176881919 0.9165245895857947 1.3049239936150183 1.3187760082025797 1.2660750223555004 0.8127926856197686 1.0702585716445274 1.0 10.318900797348439 -8.768847643041628 24.99872929154897 0.9115965471375812 1.122889932981568 0.15156064872262864 0.1691467947137855 182.60936718291927 616202.1605624522 0.03036010351816851 0.03263653789888041 1.702755755651229e-09 8.768847643041628 0.21129338584398683 GPASDS(ph)ETEDASR ddPTM_A549_PD325901_60min_R1 2 GPASDSETEDASR 13 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 1 GPAS(0.163)DS(0.83)ET(0.007)EDASR;GPAS(0.155)DS(0.833)ET(0.012)EDASR 103.76 0.00011968 6908000.0 1491.33 1070.19 1613.12 1661.5 1679.44 1547.22 1831.54 1486.0 1454.46 1832.6599999999999 2076.0 True False 1642.728723740879 1160.3786671321313 1722.596023678575 1764.1270814597192 1561.4819281534706 1534.6199532991561 1901.2402569571443 1456.3605642555508 1393.3341042208958 1716.945534836287 1820.6651608482741 0.9022684451080001 0.6373377664850215 0.9461355447016917 0.968946470441488 0.8576436577860114 0.8428897231076551 1.0442558565086888 0.7999057682726304 0.7652884968544801 0.9430320147590111 1.0 10.830249904834156 -11.06489302860956 1.3984263840999929 0.9994567170518802 0.8523280219641325 0.1261979822137801 0.10485246587445675 0.5453893579746998 1.9147295886309694 0.0741925597650952 0.016696541813658296 8.612058503033167e-12 11.06489302860956 -0.14712869508774773 GPASPT(ph)RPAAPRPAEAPLLDL ddPTM_A549_MK2206_60min_R1 1 GPASPTRPAAPRPAEAPLLDL 21 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 GPAS(0.437)PT(0.563)RPAAPRPAEAPLLDL 49.871 0.024028 87040000.0 766.88 687.44 635.34 542.8 925.32 503.32 741.99 777.4 1336.3 978.61 1229.1 True False 896.3105955841097 722.4277597063572 725.4407655359813 675.7860243672176 789.2066537639922 556.5809883232238 876.7999785258728 887.5988306876515 1033.6301836326058 757.5413213258374 923.8805485657001 0.9701585307490325 0.7819493124169645 0.7852105628397619 0.7314647173991891 0.8542301869968087 0.6024382580489447 0.9490404142473627 0.9607289947446398 1.118792018337532 0.8199559158398779 1.0 9.85156252287484 -8.130333300947719 2.606272316427777 1.0525961111703694 0.7881520940244938 0.2915731730811386 0.1167877259714244 0.13466597431455843 1.78631818016457 0.015235341119980428 0.020238168127031143 7.407415381985142e-09 8.130333300947719 -0.2644440171458756 GPASQFYITPSTSLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GPASQFYITPSTSLSPR 17 0 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GPASQFYITPS(0.002)T(0.002)S(0.001)LS(0.994)PR;GPASQFYITPS(0.002)T(0.002)S(0.028)LS(0.967)PR 129.05 5.3208e-12 22366000.0 2654.3999999999996 3289.5 3700.6 3106.1 5057.2 3825.1000000000004 3866.1 3501.4 5208.0 5182.5 5404.3 True False 3102.3978261507136 3456.9214994094896 4225.400725505164 3867.0946394381285 4313.29257923233 4229.869543104117 4568.520326391022 3997.7341725877827 4028.396315467042 4011.7696505974304 4062.2631589078323 0.76371168109769 0.8509841347498784 1.0401592807299054 0.9519557173341334 1.0617954599455317 1.041259361503637 1.124624414440767 0.9841150157447213 0.9916630601918228 0.9875701040687926 1.0 11.988067987061699 -5.614288308238294 3.5538110852687264 1.010466089980046 0.7772613693100828 0.7647535288101751 0.046192323946065046 0.080087159881848 1.8942229491151543 0.0064425986817646655 0.031520906030254446 2.430589915922011e-06 5.614288308238294 -0.23320472066996312 GPASQFYITPSTSLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 GPASQFYITPSTSLSPR 17 0 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GPASQFYIT(0.002)PS(0.117)T(0.117)S(0.117)LS(0.648)PR;GPASQFYITPS(0.018)T(0.018)S(0.146)LS(0.818)PR 126.88 3.6686e-11 40985000.0 4523.7 5468.2 5325.299999999999 5211.8 6443.0 5424.6 5281.1 4960.1 5728.299999999999 6288.200000000001 6100.8 True False 4982.942693828071 5929.024404649572 5686.70688163033 5533.721049143399 5990.465907143338 5380.423856120399 5482.0751504288055 4861.166914376828 5487.559471699843 5891.161978849078 5350.440276157586 0.9313145155610573 1.108137666926262 1.0628483990319828 1.0342552693845666 1.119621114889892 1.005603946295116 1.0246026247331095 0.9085545606478334 1.025627647158923 1.1010611603499312 1.0 12.385441897315028 -7.459302123539377 24.999693599041123 1.004337467990366 1.0549499042593165 0.08872654951642411 0.061938581751814326 285.54341556549616 112281.42214477783 0.007646670393679526 0.012224038645044117 3.4729447672010794e-08 7.459302123539377 0.0506124362689504 GPASSHRES(ph)PR ddPTM_A549_PD325901_60min_R1 1 GPASSHRESPR 11 1 C9JAV3;A4D2B0 C9JAV3 MBLAC1 Metallo-beta-lactamase domain-containing protein 1 1 GPASSHRES(1)PR 63.185 0.0019147000000000003 9339300.0 649.23 729.69 628.03 525.22 628.08 483.97 600.26 824.74 713.11 518.55 752.1 True False 715.1393516621348 791.1835371472775 670.6518924511848 557.6616465388344 583.9658275583713 480.0287087797423 623.1032227748755 808.2899137039861 683.1404666068247 485.8086645037032 659.5964679547142 1.0842073698175625 1.1994963217444 1.016760890989534 0.8454588125191744 0.8853380148761872 0.7277611874851634 0.944673376901187 1.2254309308391882 1.035694549313031 0.7365240538811637 1.0 9.365439863144008 GPAST(ph)PTYSPAPTQPAPR ddPTM_A549_PD325901_60min_R1 1 GPASTPTYSPAPTQPAPR 18 0 Q6P1N0;Q6P1N0-2;K7EJY5 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 GPAS(0.013)T(0.658)PT(0.309)YS(0.019)PAPTQPAPR 167.69 3.8926e-30 5257800.0 1838.1 1560.9 1985.1 1770.4 2007.8 1792.4 1571.1 1835.1 1981.1 2201.4 2146.6 True False 2024.7025588622973 1692.442520979027 2119.820823376028 1879.753587129874 1866.779054533973 1777.8032886683256 1630.8890702389087 1798.4974908918998 1897.8412564608286 2062.4032283067268 1882.5818084185476 1.0754924698667612 0.8990007836104366 1.1260179047181869 0.9984976900998266 0.9916058076127647 0.9443431784575458 0.8663044883074315 0.9553356368628239 1.008105596247687 1.0955185156278744 1.0 10.87849684386755 -4.924884654737228 17.80482031848059 0.9900880507631253 2.932896482574699 0.10737983138148144 0.07198989614601735 8037933.588315386 24616674.443362005 0.00859851215249363 604166191.9537873 1.1888179263782326e-05 4.924884654737228 1.9428084318115735 GPAYGLSR ddPTM_A549_MK2206_60min_R1 2 GPAYGLSR 8 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ; 97.602 0.0068021 10076400.0 3928.2 4854.9 4077.3999999999996 4324.0 5967.9 4461.0 4671.0 4511.5 7007.9 6468.5 6568.8 False True 4591.184124730724 5101.993673045487 4655.636631404303 5383.380194111734 5090.029815629328 4933.06005902786 5519.660237596668 5151.018940889295 5420.6218393167255 5007.261357431642 4937.585670342827 0.9298439422139582 1.0332972455931575 0.9428973879618888 1.0902859319376539 1.0308742279049745 0.9990834363964255 1.1178864745071706 1.0432262414864892 1.0978284127554916 1.0141112867179836 1.0 12.269590064759495 -6.257655482739997 24.998337485848996 1.0499294776709227 0.9751412969102756 0.3912804924798159 0.04450127037403482 294.4111893829966 1945017.486107542 0.006628779628751181 0.016834499195598426 5.52515565196722e-07 6.257655482739997 -0.07478818076064708 GPAYGLSR ddPTM_A549_PD325901_60min_R1 1 GPAYGLSR 8 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 55.676 0.056423 14366000.0 2603.2 2973.0 2634.0 2889.5 3244.7 3136.5 3385.8 3120.5 3488.4 3301.1 3582.8 False True 2867.474947625448 3223.5451437444062 2812.7590795287188 3067.977852469371 3016.803465607324 3110.9573839032596 3514.648471780853 3058.259179515108 3341.7946792377725 3092.6679826307495 3142.1383132404576 0.9125871179961674 1.0259080990040805 0.8951735407942456 0.9763980915612192 0.960111607084579 0.9900765255285527 1.1185530748187305 0.9733050791011023 1.063541558675503 0.984255839279497 1.0 11.617530972434295 -7.527746068349478 24.980352458625845 1.0326360265429613 0.9579101541446392 0.3392916303072233 0.04882551136808031 106.3676795203259 545903.9018309488 0.0068773058046250855 0.010220812034135395 2.9665654310611397e-08 7.527746068349478 -0.07472587239832207 GPDEAMEDGEEGS(ph)DDEAEWVVTK ddPTM_A549_MK2206_60min_R1 5 GPDEAMEDGEEGSDDEAEWVVTK 23 0 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK 137.16 5.759499999999999e-23 30368200.0 5678.03 5961.799999999999 5002.46 4723.26 7695.849999999999 6115.120000000001 5768.09 5802.34 8873.3 8277.5 9017.1 True False 6636.342649494631 6265.230155093323 5711.884049427271 5880.4589120351975 6563.800659630848 6762.2179395118665 6816.07728963369 6624.8394639209955 6863.511717748408 6407.6070010265785 6777.905210700331 0.9791141131654933 0.924360840160815 0.8427211464111176 0.8675923798331779 0.9684113978561585 0.997685528094477 1.0056318401846482 0.9774169537606267 1.0126302307847164 0.9453668651061747 1.0 12.726623745472073 -6.946119931675809 4.404334494367059 1.0026465374401246 0.9009685943723467 0.5250021523686776 0.03731815882264276 0.09628098425123334 3.9347827353975426 0.00493724715324969 0.009464989009788944 1.1320876907785517e-07 6.946119931675809 -0.10167794306777789 GPDEAMEDGEEGS(ph)DDEAEWVVTK ddPTM_A549_PD325901_60min_R1 4 GPDEAMEDGEEGSDDEAEWVVTK 23 0 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK 199.46 3.286499999999999e-61 149907000.0 21144.0 19745.1 16900.3 19389.0 19028.3 17276.0 15893.2 16304.300000000001 20947.8 19061.8 24718.300000000003 True False 23290.523314609898 21409.088872434473 18047.255987759752 20586.614494386085 17691.817852071334 17135.309983839536 16498.024423092746 15979.09794602409 20067.43681393676 17858.234694892853 21678.105802213806 1.0743800001304278 0.9875903857913702 0.8325107439007302 0.9496500608592723 0.8161145633980905 0.7904431383525053 0.7610454794167458 0.7371076648399916 0.9257006583982739 0.823791287754908 1.0 14.403951081391568 -4.1349185622079965 19.8579872560126 0.917405882320671 0.8872786336085213 0.0 0.11151982544318247 0.0 0.0 0.015828141943340878 0.0 7.329619634085157e-05 4.1349185622079965 -0.030127248712149668 GPDEAMEDGEEGS(ph)DDEAEWVVTKDK ddPTM_A549_MK2206_60min_R1 4 GPDEAMEDGEEGSDDEAEWVVTKDK 25 1 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 GPDEAMEDGEEGS(1)DDEAEWVVTKDK;GPDEAMEDGEEGS(1)DDEAEWVVTKDK;GPDEAMEDGEEGS(1)DDEAEWVVTKDK;GPDEAMEDGEEGS(1)DDEAEWVVTKDK 142.45 1.6222e-32 49807000.0 6590.500000000001 8630.0 7976.0 7112.700000000001 13864.0 8161.799999999999 8958.4 7430.1 14545.099999999999 11706.899999999998 15881.900000000001 True False 7702.815277744985 9069.23013828968 9107.116734213154 8855.311819301238 11824.62396552975 9025.476258635632 10586.025320592158 8483.339428726933 11250.658073751858 9062.303159204843 11937.985911858752 0.6452357486947019 0.7596951617509151 0.7628687788252859 0.7417760319606927 0.9905040978297359 0.7560300644742811 0.8867513664994691 0.7106173094323975 0.9424251424669443 0.7591149148704127 1.0 13.543271835911396 -2.9487340737085197 0.09536062851989524 1.1451548436854544 4.7552562854787377e-14 0.037119261859170916 0.11221629299764103 48.747967279605625 0.3918158545598753 0.6814082738711718 7.300952282799972 0.0011252938006082564 2.9487340737085197 -1.1451548436854069 GPDEAMEDGEEGS(ph)DDEAEWVVTKDK ddPTM_A549_PD325901_60min_R1 4 GPDEAMEDGEEGSDDEAEWVVTKDK 25 1 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 GPDEAMEDGEEGS(1)DDEAEWVVTKDK;GPDEAMEDGEEGS(1)DDEAEWVVTKDK;GPDEAMEDGEEGS(1)DDEAEWVVTKDK;GPDEAMEDGEEGS(1)DDEAEWVVTKDK 197.96 1.9827999999999998e-68 169555000.0 13781.100000000002 15161.6 17379.1 17075.2 15045.4 23681.8 17863.4 18530.5 22047.000000000004 21654.0 22771.0 True False 15180.147126890384 16439.321241639827 18558.550235018054 18129.896323407163 13988.663007812253 23488.943272475768 18543.20146222756 18160.89464060397 21120.44126050773 20286.762744505253 19970.31135726205 0.7601357262449612 0.8231880288467207 0.9293070049340708 0.9078424466734399 0.7004729549559768 1.176193142523749 0.9285384253903717 0.9093946666985689 1.0575919865579584 1.0158460918100873 1.0 14.28556920557501 -7.257096174775229 24.999236935636386 1.0191034901860203 0.8346208916461116 0.5367111641829165 0.08778767830133062 231.54775074450018 1332774.2474396958 0.012667352775205455 0.021458702082885153 5.5322758306720365e-08 7.257096174775229 -0.18448259853990867 GPDGPWGVGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 GPDGPWGVGTPR 12 0 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GPDGPWGVGT(1)PR;GPDGPWGVGT(1)PR 84.169 0.00053348 9509500.0 3144.9 3150.5 2479.0 2298.1 3858.5 3390.7 2606.1 3094.0 4536.7 4137.7 4527.1 True False 3675.682234577075 3310.8469931264926 2830.5594764436337 2861.1346031656276 3290.919761324044 3749.5016234354985 3079.594636095199 3532.583974977607 3509.1446936212265 3202.9906962425466 3402.8961283962103 1.0801629247230151 0.9729497663764717 0.8318089561486792 0.8407939870072039 0.967093803969579 1.1018560314395032 0.9049922536268 1.038111021226651 1.0312229821940204 0.9412543243722578 1.0 11.732547399134337 -7.001687937589859 24.959619776383505 1.0141788952963386 0.9243620854562563 0.14268638149421975 0.07872602530515717 73.37570238209928 1085046.1701756865 0.010736095324942775 0.020086876733361594 9.961209231993434e-08 7.001687937589859 -0.08981680984008233 GPDGPWGVGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GPDGPWGVGTPR 12 0 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GPDGPWGVGT(1)PR;GPDGPWGVGT(1)PR 91.62 0.00028537 12146800.0 4068.1 3354.7 3164.7 4059.4 3733.7 3754.2 3416.0 3320.8 4411.1 4132.4 4835.6 True False 4481.090517223062 3637.4123423206715 3379.4755728870678 4310.139918433696 3471.457792565742 3723.6270399010423 3545.997749306925 3254.5640388827974 4225.716807013458 3871.4795587602043 4240.851855393985 1.0566486805059025 0.8577079479195219 0.7968860238748204 1.0163382417972424 0.8185755859758123 0.8780375186095976 0.8361522331407858 0.7674316740735196 0.9964311301369142 0.9129013912230931 1.0 12.050138371175441 -8.86128771976749 13.265470728099864 0.9984121140999752 0.8762444303824385 0.15915690335339516 0.08681504023529325 0.5049758190969665 64.14727579964355 0.01357138678306434 0.014444185023170103 1.376297370822542e-09 8.86128771976749 -0.12216768371753672 GPDMELPS(ph)HSK ddPTM_A549_PD325901_60min_R1 1 GPDMELPSHSK 11 0 Q96JB3-2 Q96JB3-2 1 GPDMELPS(0.5)HS(0.5)K 48.79600000000001 0.018488 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GPDPS(ph)SPDKAK ddPTM_A549_PD325901_60min_R1 2 GPDPSSPDKAK 11 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GPDPS(0.583)S(0.417)PDKAK;GPDPS(0.658)S(0.342)PDKAK 104.79 0.00015552 9981500.0 3461.7 2811.8 3482.8999999999996 3461.3999999999996 4359.3 3821.4 3143.4 4014.1000000000004 4028.2 3784.0 3888.9 True False 3813.1292356311506 3048.760254012957 3719.2705383791103 3675.2028165902293 4053.1178067685787 3790.279785381134 3263.0238071344797 3934.0356264994684 3858.908762442837 3545.077594218518 3410.589953768231 1.1180262908527507 0.8939099379696752 1.0905065073184272 1.0775856571469804 1.1883919971940464 1.1113267313748456 0.9567329556956234 1.1534765773155762 1.1314490497983423 1.0394323686732545 1.0 11.735805598620958 GPDPSS(ph)PDKAK ddPTM_A549_MK2206_60min_R1 1 GPDPSSPDKAK 11 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GPDPS(0.092)S(0.908)PDKAK 90.685 1.053e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GPDPSS(ph)PDKAK ddPTM_A549_PD325901_60min_R1 2 GPDPSSPDKAK 11 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GPDPS(0.064)S(0.936)PDKAK;GPDPS(0.123)S(0.877)PDKAK 89.959 8.376399999999999e-05 85939000.0 9802.8 10698.900000000001 11100.0 10425.400000000001 11910.9 12149.599999999999 11796.0 12447.7 12840.5 12443.400000000001 12095.6 True False 10797.973039560047 11600.533850792815 11853.312749722392 11069.353280198706 11074.31947437429 12050.657685787046 12244.903235018877 12199.42085846826 12300.858439041569 11657.721600396071 10607.917880325811 1.017916349030824 1.0935731197832874 1.1174023859768352 1.0434991489450258 1.0439673081287233 1.1360059364842032 1.1543173102545536 1.1500297227125185 1.1595921629310126 1.0989641635534622 1.0 13.372853891739164 -5.259360156259555 23.170850229997328 1.0895979001835632 1.0179162828017563 0.15298261670998814 0.05045714519761038 138.33090805527718 1541219.7315070466 0.00921309500345759 0.08275797436856709 5.503511062006929e-06 5.259360156259555 -0.0716816173818069 GPEEDRFS(ph)R ddPTM_A549_PD325901_60min_R1 1 GPEEDRFSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 GPEEDRFS(1)R 57.836000000000006 0.0035275999999999997 2355200.0 256.33 284.45 266.13 292.02 243.15 226.4 336.98 207.26 318.16 156.57 307.95 True False 282.3524328998276 308.42159977736185 284.1911821696955 310.05741217446104 226.0719828219621 224.55627346268074 349.80395830253156 203.12603670767535 304.78884163120347 146.68414347959663 270.07410225588893 1.045462821282676 1.1419887993745492 1.0522711352028524 1.1480457014745118 0.8370739028052536 0.8314617047210209 1.2952147406236694 0.752112235164326 1.128537831229827 0.5431255431541407 1.0 8.07721149441867 GPEEEEIGSPEPMAAPASASQKLS(ph)PLQK ddPTM_A549_MK2206_60min_R1 1 GPEEEEIGSPEPMAAPASASQKLSPLQK 28 1 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 GPEEEEIGSPEPMAAPAS(0.033)AS(0.033)QKLS(0.935)PLQK 117.49 6.4459e-21 6374100.0 1283.4 1297.7 1422.1 1205.1 1701.6 1387.0 887.24 1074.3 2320.9 1890.0 2008.8 True False 1500.0065438825443 1363.747387075147 1623.7751639574378 1500.3495540989938 1451.2968940958904 1533.771419383914 1048.440023379419 1226.5853149057677 1795.2198557157185 1463.047687337993 1509.9595199404268 0.9934084484210045 0.9031681770707015 1.075376619382155 0.9936356135945869 0.9611495374082274 1.0157698925891911 0.6943497554297241 0.812329932496575 1.1889191941957133 0.9689317283126341 1.0 10.560294157944883 -8.766139104575581 24.997516700130674 1.0892118360407574 0.933033785442292 0.16737513092016298 0.1128208767958642 119.89330175704607 637703.15745278 0.02108985797771518 0.02281296420628456 1.7134084146834682e-09 8.766139104575581 -0.15617805059846546 GPEEEEIGSPEPMAAPASASQKLS(ph)PLQK ddPTM_A549_PD325901_60min_R1 2 GPEEEEIGSPEPMAAPASASQKLSPLQK 28 1 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 GPEEEEIGSPEPMAAPAS(0.001)AS(0.002)QKLS(0.998)PLQK;GPEEEEIGSPEPMAAPAS(0.001)AS(0.006)QKLS(0.992)PLQK 185.5 7.743199999999999e-67 25765000.0 4103.2 3333.8 3900.1000000000004 3341.7999999999997 4264.4 4388.5 4258.7 4044.3 4644.3 3913.6 4312.4 True False 4519.75384338381 3614.7510259721184 4164.784239206516 3548.2153962215407 3964.8832553813513 4352.761511002536 4420.767158950058 3963.633263808025 4449.116221988299 3666.494628100844 3782.0021385559226 1.19506908716598 0.9557770973001973 1.1012114976742848 0.9381843971078112 1.0483556354876251 1.1509146085952628 1.1688959966157064 1.0480251249465062 1.176391778479295 0.9694586342832734 1.0 11.884934463730605 -7.027375443876771 24.10030057343172 1.093895015023419 1.0383909348978735 0.03497334148667264 0.08916159674700724 969.5586337524013 853563.0098064949 0.013122060742443625 0.022776037890716243 9.389112788226523e-08 7.027375443876771 -0.05550408012554553 GPEENYSRPEAPNEFYDGDHDNDKES(ph)DVEI ddPTM_A549_MK2206_60min_R1 2 GPEENYSRPEAPNEFYDGDHDNDKESDVEI 30 2 O15379;O15379-2 O15379 HDAC3 Histone deacetylase 3 1 GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI 194.08 7.631099999999999e-69 100317000.0 8091.1 9209.5 9188.4 8846.1 13312.3 12591.7 11296.2 11921.1 14714.7 13338.8 11848.4 True False 9456.679871597365 9678.224213045052 10491.453284935327 11013.39489711652 11354.078304697174 13924.145336306 13348.573319618816 13610.952431837599 11381.843944547416 10325.55581580106 8906.115280795571 1.0618187137088813 1.0866942441127383 1.1780055562000473 1.2366104131691307 1.2748631638735008 1.5634364588038632 1.4988098512942678 1.5282704077710692 1.277980756558396 1.1593781901820042 1.0 13.120580570814752 -3.8016404210457555 16.085227088970992 1.2155275020599448 1.1787245454331026 0.0 0.1902630765553692 0.0 0.0 0.029828168230673583 0.0 0.00015789180114153973 3.8016404210457555 -0.03680295662684219 GPEENYSRPEAPNEFYDGDHDNDKES(ph)DVEI ddPTM_A549_PD325901_60min_R1 2 GPEENYSRPEAPNEFYDGDHDNDKESDVEI 30 2 O15379;O15379-2 O15379 HDAC3 Histone deacetylase 3 1 GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI 142.56 2.1426999999999997e-36 267070000.0 6992.0 6855.3 6529.4 7973.700000000001 9693.0 7551.700000000001 7714.599999999999 7930.299999999999 8298.9 8365.9 9022.7 True False 7701.822692761654 7433.020189677444 6972.524348471834 8466.217339413397 9012.197119034665 7490.201458958153 8008.183324591098 7772.123945299998 7950.126093202143 7837.675646266577 7912.965099607762 0.9733169040696801 0.9393470205051065 0.8811519146997698 1.0699171843729045 1.1389153124764055 0.9465732964409809 1.012033191576702 0.9822012162906235 1.0046962160361637 0.9904853045105789 1.0 12.950002678846376 -6.257885219879341 24.999741223876512 1.0109495625093043 0.9320794561830473 0.35028315771578256 0.052004463236993974 282.32511271316616 1985847.946760652 0.007194576325952077 0.018196862908978487 5.522233676593206e-07 6.257885219879341 -0.07887010632625702 GPES(ph)ESEDHR ddPTM_A549_PD325901_60min_R1 1 GPESESEDHR 10 0 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 GPES(0.986)ES(0.014)EDHR 74.76 0.00048947 2008200.0 137.43 96.963 121.04 151.67 212.19 158.08 125.81 152.16 92.87 219.06 299.53 True False 151.38179242938125 105.1344123016781 129.2545022726485 161.03831143243787 197.28650641576047 156.79264889125702 130.59776839587363 149.12504943278915 88.96699686412451 205.22851421498652 262.68970887711123 0.576276067595016 0.40022280564809254 0.49204250453950976 0.6130362400598386 0.7510248774460099 0.596873968003848 0.4971560132832174 0.5676851600705504 0.3386771306893645 0.7812582955466839 1.0 8.037215872382642 -10.938059996916532 1.1761569915013086 1.0020303548674911 0.5238082313220187 0.5388507660053798 0.12076162459659362 0.22432931301295692 0.5476307239170469 0.08733120422468477 0.02011845074952216 1.1532939215601799e-11 10.938059996916532 -0.47822212354547244 GPEVTSQGVQT(ph)SSPACKQEKDDKEEK ddPTM_A549_PD325901_60min_R1 1 GPEVTSQGVQTSSPACKQEKDDKEEK 26 3 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 GPEVTSQGVQT(0.333)S(0.333)S(0.333)PACKQEKDDKEEK 115.18 1.3834000000000002e-17 9932400.0 1105.8 902.39 856.56 1106.2 1316.7 992.94 970.55 961.66 1022.2 1002.2 1073.5 True False 1218.0600019530648 978.4375722379808 914.6913125137129 1174.5274616375207 1224.2195343684052 984.8538258482084 1007.4848113553384 942.4789368923241 979.2404887962534 938.9209209634778 941.4663054771778 1.2937903299000135 1.039269877791393 0.9715603279610797 1.2475512451209998 1.3003328183348157 1.0460850485233668 1.0701230681269038 1.001075589651223 1.040122714004013 0.997296361538494 1.0 9.878765652335048 -7.4944074611064915 24.020921335210357 1.0228932126302506 1.1581156792963538 0.3629969689327923 0.09522322633144695 412.1915067797101 347761.6391613556 0.014366533955222794 0.02293404535861385 3.2032625688654365e-08 7.4944074611064915 0.13522246666610327 GPEVTSQGVQTS(ph)SPACKQEK ddPTM_A549_PD325901_60min_R1 1 GPEVTSQGVQTSSPACKQEK 20 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 GPEVT(0.001)S(0.003)QGVQT(0.143)S(0.427)S(0.427)PACKQEK 40.681999999999995 0.024748 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GPEVTSQGVQTSS(ph)PACKQEKDDKEEK ddPTM_A549_MK2206_60min_R1 1 GPEVTSQGVQTSSPACKQEKDDKEEK 26 3 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 GPEVTSQGVQT(0.007)S(0.18)S(0.813)PACKQEKDDKEEK 97.639 7.4523e-10 5833900.0 683.89 444.94 738.99 1007.5 768.05 887.74 745.44 563.64 1433.2 1126.6 1234.5 True False 799.3139124948054 467.5855455076025 843.78989410935 1254.3375452283933 655.0708624296828 981.68005756588 880.8767988683489 643.5376960751063 1108.582488350109 872.100277542319 927.9395795332823 0.8613857304123501 0.5038965422110564 0.9093155553659471 1.3517448472876612 0.7059412885041051 1.0579137685447442 0.9492824945686613 0.6935124983016467 1.1946709816038703 0.9398244204444341 1.0 9.857887060703527 -4.494623288170508 0.37499151850396206 1.0653228384900817 0.13829192042820881 0.058307352108437405 0.21936833335908618 10.977958241669489 0.6797947865302578 0.055306037115545936 5.1745532690541785 3.2016710704102e-05 4.494623288170508 -0.9270309180618729 GPEVTSQGVQTSS(ph)PACKQEKDDKEEK ddPTM_A549_PD325901_60min_R1 1 GPEVTSQGVQTSSPACKQEKDDKEEK 26 3 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 GPEVTSQGVQT(0.178)S(0.178)S(0.644)PACKQEKDDKEEK 86.785 4.0468000000000005e-09 10950000.0 755.35 614.93 962.24 752.43 831.4 838.3 790.23 920.14 831.6 950.79 764.02 True False 832.0325759407201 666.7523091970226 1027.543392819178 798.9058922074851 773.005332174293 831.4731627374794 820.302635080448 901.7870858641346 796.6507439668999 890.7569571371637 670.0503835218199 1.2417462871486071 0.9950778711483419 1.5335315344770886 1.1923071933910312 1.1536525479044375 1.2409114048516963 1.2242402291733563 1.3458496674896214 1.1889415535883465 1.329388026696289 1.0 9.388125770903589 -10.131935113746977 0.7542182817444907 1.0070839815875554 1.2371917381559943 0.0 0.15646787950190888 0.5341849310635166 0.5948273749794504 0.06344636060119836 0.02456783512247723 7.380144857725115e-11 10.131935113746977 0.23010775656843885 GPGAPGLAHLQESQAGS(ph)DTDVEEGKAPQAVPLEK ddPTM_A549_MK2206_60min_R1 1 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 GPGAPGLAHLQES(0.003)QAGS(0.499)DT(0.499)DVEEGKAPQAVPLEK 63.706 0.00039355 24021000.0 704.66 932.81 1092.5 811.22 1271.7 723.08 675.98 677.0 1469.0 1439.3 1254.2 True False 823.5893807170596 980.28604464635 1247.432927799382 1009.9689364170497 1084.6346146108028 799.5958456583426 798.7968159731518 772.9668232255461 1136.273845510962 1114.1611303627376 942.747525840942 0.873605454421541 1.039818209835049 1.3231887579727744 1.0713037252642434 1.1505038039143045 0.8481548068186057 0.8473072525548295 0.8199086203234005 1.2052790533683897 1.1818234467058322 1.0 9.880727648918713 -5.278938787890242 5.422165744350309 1.0636975046132298 0.868201756017138 0.08897221427429547 0.1554873556292474 0.2565507516914217 26.080870877844074 0.022446948678133936 0.17560965071884913 5.260914116935561e-06 5.278938787890242 -0.19549574859609176 GPGAPGLAHLQESQAGS(ph)DTDVEEGKAPQAVPLEK ddPTM_A549_PD325901_60min_R1 1 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 GPGAPGLAHLQESQAGS(0.545)DT(0.455)DVEEGKAPQAVPLEK 126.82 1.0128e-22 37550000.0 1564.0 1556.7 1709.6 1914.5 2078.0 1517.7 2087.9 2036.3 1487.5 2193.1 2378.3 True False 1722.776128644054 1687.888572239126 1825.623736659947 2032.75431685503 1932.048448710826 1505.340354391831 2167.35617704272 1995.684399053552 1424.98554792059 2054.6272917232127 2085.784177285863 0.8259608771631518 0.8092345270523145 0.8752697218345712 0.9745755764146997 0.92629355891697 0.7217143416777966 1.0391085523829235 0.956802923709224 0.6831893555616381 0.9850622677542826 1.0 11.026374170004006 -11.263766714753332 1.7814343219804831 1.0002768838374885 0.8422638629096277 0.1403219976931961 0.10393764786576154 0.4893313500355559 2.8019467893012777 0.08814186239607062 0.017774398463445976 5.447952159839095e-12 11.263766714753332 -0.15801302092786074 GPGAPGLAHLQESQAGSDT(ph)DVEEGKAPQAVPLEK ddPTM_A549_MK2206_60min_R1 1 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 GPGAPGLAHLQESQAGS(0.258)DT(0.742)DVEEGKAPQAVPLEK 146.03 5.953299999999999e-40 28377000.0 953.75 1393.2 1174.2 1255.5 1817.8 1340.2 1269.6 811.99 1364.7 1975.7 1536.9 True False 1114.719683051252 1464.107929161667 1340.719216313075 1563.097556361536 1550.4040280250988 1482.0190744472402 1500.2698860314115 927.0920691150837 1055.597628978086 1529.3879978167568 1155.2453137178622 0.9649203245532425 1.2673567352113373 1.1605493659163286 1.3530438408194925 1.3420561067116723 1.2828609273278417 1.298659140371819 0.8025066694548836 0.9137432685884822 1.3238642733765453 1.0 10.173983521849102 -8.250389702952765 24.851813208471523 0.9463724703609946 1.24670025092504 0.2941479107317968 0.15920131662148934 328.1790050635449 738107.4688064829 0.017896305686093367 0.02299136584652934 5.618369490334347e-09 8.250389702952765 0.3003277805640454 GPGAPGLAHLQESQAGSDT(ph)DVEEGKAPQAVPLEK ddPTM_A549_PD325901_60min_R1 1 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 GPGAPGLAHLQESQAGS(0.08)DT(0.919)DVEEGKAPQAVPLEK 110.32 1.0003e-14 36619000.0 1344.1 1770.8 1854.8 1566.8 1907.5 1968.7 1881.4 2400.3 1698.2 1991.6 2381.9 True False 1480.5520425258765 1920.0315306231403 1980.6778818184769 1663.5776775390225 1773.5237805177574 1952.6675599204048 1952.9977065415837 2352.4241335010765 1626.8305596495768 1865.8500361114168 2088.941400108142 0.708757096991438 0.9191409249315192 0.948173022812387 0.7963735495179047 0.8490059991275697 0.934764163235655 0.9349222081770602 1.126132180337512 0.7787822863606216 0.8932036274520789 1.0 11.028556306526577 -7.252940947363162 22.080358653200847 0.9180539826455859 0.8515577212818117 0.17539183161379657 0.09905711412287214 296.3111310531538 769858.6574855932 0.01686692809570564 0.028851920932732037 5.5854613717040685e-08 7.252940947363162 -0.06649626136377418 GPGDLMGPQGLS(ph)PEEMAR ddPTM_A549_MK2206_60min_R1 2 GPGDLMGPQGLSPEEMAR 18 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR 90.714 5.660700000000001e-06 4504800.0 1639.73 2088.7 1827.4 2160.8999999999996 2720.5 1745.14 1847.67 2228.52 2950.5 2867.2 2977.3 True False 1916.4763364504636 2195.005908440981 2086.5527984078635 2690.320597006485 2320.3180538245592 1929.8095564698226 2183.367722372132 2544.419534556268 2282.2164609803212 2219.497528643118 2237.954240700236 0.8563518867350993 0.9808091106251499 0.9323482850815572 1.2021338721227417 1.036803171229521 0.8623096582466326 0.9756087424240523 1.1369399285662525 1.0197779827107796 0.9917528644145366 1.0 11.127964822589549 -5.228213656134135 1.6274650409663662 1.0170425851390732 0.793635987028469 0.23065367781477075 0.08632807574751167 1.2729995484816392 2.9701672882246575 0.011900653325283726 0.4578324494434705 5.912706802432206e-06 5.228213656134135 -0.22340659811060415 GPGEGVLT(ph)LR ddPTM_A549_MK2206_60min_R1 2 GPGEGVLTLR 10 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 GPGEGVLT(1)LR;GPGEGVLT(1)LR 78.655 0.0013943 46089000.0 1073.73 705.8 468.24 794.27 1024.47 722.48 875.4 777.53 1091.87 1266.1399999999999 1357.17 True False 1254.9493738218828 741.7222052844561 534.643472872112 988.8661856561355 873.7718201072025 798.9323540565903 1034.4488486388618 887.747258585759 844.5631883581034 980.1180946275804 1020.1472330135158 1.2301649538515742 0.7270736823874021 0.5240846179553659 0.9693367326351745 0.8565154046696571 0.7831539685664229 1.0140191681774198 0.8702148374831669 0.8278836240757749 0.960761410617476 1.0 9.994561669221097 -7.74120064986806 24.982715062315147 0.9187459778587576 0.8339999457254165 0.053561337669162934 0.16892481470199666 622.5333089553286 768454.3240032628 0.025687163172426468 0.03807415227059303 1.8146770639547704e-08 7.74120064986806 -0.08474603213334109 GPGEGVLT(ph)LR ddPTM_A549_PD325901_60min_R1 2 GPGEGVLTLR 10 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 GPGEGVLT(1)LR;GPGEGVLT(1)LR 131.83 1.1284999999999999e-06 75652000.0 3615.6 3922.7 3603.2 3998.1 3997.6 3777.5 4047.2999999999997 4546.200000000001 4511.1 5198.799999999999 4558.299999999999 True False 3982.6530503359572 4253.279695716846 3847.734819801779 4245.053556656096 3716.822366971318 3746.7372924261344 4201.322216267541 4455.522474575092 4321.514154772825 4870.546880767239 3997.657997444451 0.9962465655846283 1.0639428631553283 0.9624972477039025 1.0618851235823061 0.9297499609389646 0.9372330736699536 1.0509458835531416 1.1145331785318644 1.0810114716004728 1.2183500649332164 1.0 11.964939338411497 GPGEPDS(ph)PTPLHPPT(ph)PPILSTDR ddPTM_A549_MK2206_60min_R1 1 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 2 GPGEPDS(0.823)PT(0.191)PLHPPT(0.982)PPILS(0.002)T(0.002)DR 63.901 0.0010630000000000001 2935900.0 426.08 562.72 440.35 516.24 621.88 476.41 460.82 532.34 648.85 469.3 708.42 True False 497.991887344144 591.3600444285482 502.7982514933252 642.7188231748943 530.4022757994544 526.8233899846363 544.5450290493035 607.8008252228765 501.88651100053596 363.2848040569948 532.4997626026468 0.935196449497288 1.1105357897968176 0.9442224894821504 1.206984243586402 0.9960610558905403 0.9893401405659475 1.0226202287636414 1.141410509278329 0.9425102999999747 0.6822252882919672 1.0 9.056637071935622 -8.825508985981848 24.99999999972107 0.9728520636271355 1.043632729284347 0.17671229183920856 0.11837347311954866 82.96567536081967 32372.43510772763 0.012880690089647267 0.01371253871501743 1.4944831197144776e-09 8.825508985981848 0.07078066565721153 GPGEPDS(ph)PTPLHPPTPPILSTDR ddPTM_A549_MK2206_60min_R1 1 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 GPGEPDS(0.826)PT(0.171)PLHPPT(0.002)PPILSTDR 45.07 0.0096834 12934000.0 1145.2 1444.6 1497.0 1529.6 1868.7 1193.9 1136.4 1416.5 1921.4 1897.0 2383.5 True False 1338.4817625481467 1518.123969614516 1709.2971102202966 1904.352068666353 1593.8167054519213 1320.2377055533198 1342.8691702001397 1617.2932128493144 1486.2059678453118 1468.466382476282 1791.6111687465198 0.7470827297223204 0.8473512534958431 0.9540558465128273 1.0629271026473401 0.8895996705395719 0.7368996848110793 0.7495315912434631 0.9027032433498587 0.8295360029961851 0.8196345323654561 1.0 10.807041849630421 -10.799542275110635 0.9876690188504392 1.0019998335757052 0.8601308379471178 0.0 0.10629524958804051 0.7273768459132423 1.23018652142133 0.07393392586005629 0.0174437661581744 1.586564472013018e-11 10.799542275110635 -0.14186899562858746 GPGEPDSPT(ph)PLHPPT(ph)PPILSTDR ddPTM_A549_MK2206_60min_R1 1 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 2 GPGEPDS(0.427)PT(0.573)PLHPPT(0.906)PPILS(0.05)T(0.044)DR 88.39399999999999 3.4531e-06 3025200.0 519.97 506.27 835.28 653.1 688.39 633.38 690.72 665.83 737.97 1050.9 835.2 True False 607.7282239540341 532.0369805459928 953.7352640112291 813.1095293187735 587.1287429047185 700.4038511963829 816.2148831755017 760.2134415188564 570.8209732959318 813.5009601182522 627.7967896526503 0.9680333413145998 0.847466870355231 1.5191783069469267 1.2951794955317528 0.9352210023717502 1.115653763670733 1.3001259270967283 1.21092279229314 0.9092448109072965 1.295802994737117 1.0 9.294153841243267 -8.763231035945305 24.993377824675648 0.9571433763832218 1.1529390006084563 0.0 0.20769419938741746 58.509111740165075 816192.21110855 0.03181325212019399 0.03471921181736255 1.7249200250453091e-09 8.763231035945305 0.19579562422523455 GPGEPDSPT(ph)PLHPPT(ph)PPILSTDR ddPTM_A549_PD325901_60min_R1 2 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 2 GPGEPDS(0.344)PT(0.656)PLHPPT(0.987)PPILS(0.006)T(0.007)DR;GPGEPDS(0.345)PT(0.655)PLHPPT(0.996)PPILS(0.002)T(0.002)DR 102.21 1.2435e-09 16841900.0 1981.05 1987.74 2117.83 2370.5 3021.1 2155.37 1936.5900000000001 2557.0 2445.3 2191.38 2879.3999999999996 True False 2182.1647376280694 2155.2538257741357 2261.5586793463585 2516.92040120389 2808.908358229201 2137.8173813306453 2010.287992192711 2505.998629072306 2342.532544759811 2053.0158928167507 2525.252054020481 0.8641373973555715 0.8534806742727852 0.8955774041429673 0.996700664868948 1.1123279174279288 0.8465758409846665 0.7960741934620388 0.9923756422977574 0.927643060830399 0.8129944452666109 1.0 11.302211680026263 GPGEPDSPT(ph)PLHPPTPPILSTDR ddPTM_A549_MK2206_60min_R1 1 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 GPGEPDS(0.168)PT(0.819)PLHPPT(0.011)PPILS(0.001)T(0.001)DR 78.752 6.832e-05 15609000.0 1471.1 2165.2 1331.0 1139.3 2107.3 1515.2 1688.7 1672.8 2136.7 2805.2 2844.7 True False 1719.385715058137 2275.3994316830617 1519.7558140970036 1418.428551145121 1797.3189615234303 1675.5374582916418 1995.5149311131436 1909.9245227351462 1652.7408616087623 2171.5033717039887 2138.282480274061 0.8040966200301868 1.0641248070233575 0.7107366908333919 0.6633494705354939 0.8405432762527569 0.7835903224895198 0.9332326058516744 0.893204962559649 0.7729291507813002 1.0155362501149379 1.0 11.062236739203442 -7.756475458509224 24.898231514978512 0.8928464180921878 0.8126398985970212 0.17436134547481907 0.11287887322372334 239.23247809550995 1199944.9649384955 0.019078811309213333 0.027805597647957862 1.7519614327736757e-08 7.756475458509224 -0.08020651949516655 GPGEPDSPT(ph)PLHPPTPPILSTDR ddPTM_A549_PD325901_60min_R1 2 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 GPGEPDS(0.373)PT(0.626)PLHPPT(0.001)PPILSTDR;GPGEPDS(0.444)PT(0.556)PLHPPTPPILSTDR 127.48 6.4144e-22 53459000.0 4834.4 5857.200000000001 5411.8 6442.8 5661.9 6306.2 5704.7 6274.9 6480.1 5844.0 6687.6 True False 5325.184729102822 6350.806799845188 5779.077291797085 6840.757123339558 5264.227676494622 6254.844398013947 5921.7954802316235 6149.742196936179 6207.7639321547695 5475.008842656718 5865.067596189267 0.9079494211733851 1.082819029054588 0.9853385655012651 1.1663560583315749 0.8975561816056424 1.0664573417837386 1.0096721620189364 1.0485373094304788 1.0584300743930324 0.9334945851628406 1.0 12.517932020388175 GPGEPDSPTPLHPPT(ph)PPILSTDR ddPTM_A549_MK2206_60min_R1 1 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 GPGEPDS(0.123)PT(0.401)PLHPPT(0.459)PPILS(0.007)T(0.009)DR 83.236 3.0876999999999996e-05 14258000.0 1812.0 1933.7 1352.0 1423.2 2316.1 1660.7 1614.9 1498.9 2305.4 2377.8 2476.6 True False 2117.8213008533353 2032.1170704995077 1543.733929871637 1771.8840638898764 1975.4047581191164 1836.4341717165576 1908.3064263958163 1711.3736651887323 1783.2305809673041 1840.6533285461785 1861.5918693172343 1.1376399605946264 1.0916018188480894 0.8292547659427755 0.9518112391303796 1.0611374011015768 0.9864859220673843 1.0250938768311848 0.9193065856139581 0.9579063007088281 0.9887523462493767 1.0 10.862321099421445 -5.544084547922672 24.990463639555333 0.9746173147919851 1.126130524095507 0.49479448471571263 0.057318838636783886 116.51717499359532 137312.16581788837 0.00759511257665785 0.02942067104479407 2.8570342852635497e-06 5.544084547922672 0.15151320930352197 GPGGS(ph)PGGLQK ddPTM_A549_MK2206_60min_R1 4 GPGGSPGGLQK 11 0 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 GPGGS(1)PGGLQK;GPGGS(1)PGGLQK;GPGGS(1)PGGLQK;GPGGS(1)PGGLQK 157.47 3.1173000000000003e-13 1061463300.0 28982.2 32203.100000000002 31825.5 26889.100000000002 40819.1 31457.9 32799.9 31480.7 45282.9 43092.0 46627.6 True False 33873.68681324036 33842.100239438754 36338.83445645697 33476.93070709756 34814.664462734814 34786.75409793601 38759.2172612175 35943.18563060039 35026.39545193215 33357.48727130624 35048.68006370683 0.9664753922735257 0.9655741722063451 1.0368103560649093 0.9551552482503664 0.9933231265614952 0.9925267951519223 1.1058681009032623 1.0255218046804515 0.9993641811407968 0.9517473186058202 1.0 15.097072492789588 -7.537965570449024 24.999283587906802 1.0110139419034772 0.9847702045372246 0.13124604601732992 0.0397021974848872 437.1767802730745 724411.4632209787 0.005673809529528383 0.008416840426456485 2.897573289429336e-08 7.537965570449024 -0.026243737366252518 GPGGS(ph)PGGLQK ddPTM_A549_PD325901_60min_R1 2 GPGGSPGGLQK 11 0 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 GPGGS(1)PGGLQK;GPGGS(1)PGGLQK 160.22 2.2734000000000002e-13 1626340000.0 30884.5 28857.4 30519.5 28851.9 34625.9 29075.0 32083.2 32234.3 30814.0 27075.8 30564.3 True False 34019.87170403279 31289.314373054123 32590.73679866241 30634.01633558088 32193.89623687016 28838.222839785532 33304.143732600685 31591.361599180855 29518.994738571484 25366.229367215077 26805.084863061107 1.2691573959877314 1.1672902560428948 1.2158415824892332 1.1428434751123004 1.2010369077859229 1.0758489662357384 1.2424561945146326 1.178558536955632 1.1012460840685603 0.9463215467066529 1.0 14.710219082130838 -9.755996212864424 0.30568769785916017 0.9557897044683124 1.2138451965571466 0.711183847113773 0.0516551451646668 0.8438091149523175 0.17001277656505043 0.07973644709986358 0.02973630784094332 1.753895796100568e-10 9.755996212864424 0.25805549208883427 GPGGSQGSQGPS(ph)PQGAR ddPTM_A549_MK2206_60min_R1 2 GPGGSQGSQGPSPQGAR 17 0 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 1 GPGGSQGSQGPS(1)PQGAR;GPGGSQGSQGPS(1)PQGAR 111.43 4.5001e-09 108117000.0 1265.77 1041.9 1267.96 938.86 1545.3400000000001 1145.28 901.77 947.33 1673.19 1448.75 1515.55 True False 1479.4010308946624 1094.9282596852856 1447.7757941716293 1168.8807421470271 1318.0225330995195 1266.4727694246646 1065.6099363000524 1081.6169285764502 1294.2151365353886 1121.4763687994264 1139.197107947886 1.298634819710532 0.9611403084209502 1.2708738321672948 1.0260566270683502 1.1569749641251845 1.111724003325508 0.9354043552828261 0.9494554726572656 1.1360765643679935 0.9844445363977606 1.0 10.153801673548717 -7.542308417005001 24.916981435929873 1.045663940091864 1.1333905950225303 0.2504927431159145 0.10590517085688864 351.0562236956079 450199.8774759531 0.01571134324811034 0.02330519607664337 2.8687426025544337e-08 7.542308417005001 0.08772665493066634 GPGGSQGSQGPS(ph)PQGAR ddPTM_A549_PD325901_60min_R1 2 GPGGSQGSQGPSPQGAR 17 0 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 1 GPGGSQGS(0.002)QGPS(0.998)PQGAR;GPGGSQGSQGPS(1)PQGAR 131.45 4.2137e-12 174129000.0 1948.43 2357.8 1915.79 1911.4299999999998 2377.4 2406.62 2310.33 2183.4300000000003 1933.82 2458.4 1939.1 True False 2146.2331792416458 2556.5000806998196 2045.8070299811416 2029.4946899275049 2210.419625584753 2387.0212846323166 2398.2508724110867 2139.8797757823004 1852.5482704401995 2303.1762044468314 1700.6029929676715 1.2620424567737107 1.5032903571682816 1.2029891976204656 1.19339710580298 1.2997858022861735 1.403632296604863 1.4102355942735174 1.258306485776589 1.0893478831337189 1.3543291491141194 1.0 10.731830666740887 -8.772619279699938 2.437344130878228 1.0361016012500823 1.32530645307484 0.1413609304729947 0.12985881130833143 0.12151959812120951 1.416241789247887 0.01675117224105387 0.018079555460690858 1.6880321749765472e-09 8.772619279699938 0.28920485182475764 GPGLLES(ph)PSIFNFTADR ddPTM_A549_PD325901_60min_R1 1 GPGLLESPSIFNFTADR 17 0 Q92615 Q92615 LARP4B La-related protein 4B 1 GPGLLES(0.964)PS(0.027)IFNFT(0.01)ADR 63.128 0.0029945 21083000.0 1879.6 1840.0 1678.6 1973.5 1766.2 1742.4 1724.8 1906.5 2159.9 2244.8 2260.3 True False 2070.4156083116122 1995.0632574805622 1792.5198902418024 2095.3986128563083 1642.14820505922 1728.2104720908794 1790.4382078467763 1868.473361879683 2069.1269142545775 2103.0629449000357 1982.2974292222307 1.0444525517666414 1.0064399156605577 0.9042638424573406 1.0570556072801112 0.828406565458509 0.8718219812094272 0.9032137062041533 0.9425797230705144 1.0438024505063375 1.0609219958102798 1.0 10.952957729260497 -8.750168641024343 24.30211494520119 1.0206844889071771 0.9415300928751968 0.2494434745856482 0.0682561910838779 174.24563930536164 375709.8941872493 0.011617718978463594 0.01311139528547295 1.777589019863706e-09 8.750168641024343 -0.07915439603198027 GPGPGQGS(ph)PGGGPGPR ddPTM_A549_MK2206_60min_R1 2 GPGPGQGSPGGGPGPR 16 0 H0YDS2;Q8IYL2 H0YDS2 TRMT44 Probable tRNA (uracil-O(2)-)-methyltransferase 1 GPGPGQGS(1)PGGGPGPR;GPGPGQGS(1)PGGGPGPR 88.76799999999999 1.2089e-05 11156800.0 2558.68 2863.2 2759.3 2035.0 3029.0 2219.2 1554.3 2585.5 2893.0 3268.8999999999996 3464.7 True False 2990.522630280028 3008.9246502840115 3150.6102312831445 2533.5750913546212 2583.438112492037 2454.0342710142636 1836.6961908149221 2952.0025427616697 2237.7401191716904 2530.4532196503515 2604.319369144564 1.1482933566870177 1.1553593180364616 1.2097633910076167 0.9728357901768476 0.9919820675989574 0.9422939060735611 0.7052499829996727 1.1335025103819385 0.859241821753496 0.9716370617331487 1.0 11.34669066251616 -6.357193265346362 4.080824786754753 0.9353603400399472 1.169592167158476 0.49887754212317514 0.09984770456507662 0.13863222243654352 4.110116794420966 0.013948624463821706 0.03413082550524434 4.393460585806602e-07 6.357193265346362 0.23423182711852875 GPGPGQGS(ph)PGGGPGPR ddPTM_A549_PD325901_60min_R1 2 GPGPGQGSPGGGPGPR 16 0 H0YDS2;Q8IYL2 H0YDS2 TRMT44 Probable tRNA (uracil-O(2)-)-methyltransferase 1 GPGPGQGS(1)PGGGPGPR;GPGPGQGS(1)PGGGPGPR 128.74 5.3722e-10 14070800.0 4534.9 4941.3 4626.6 4495.4 5480.5 5481.4 5485.4 5562.8 5105.9 5499.2 5746.3 True False 4995.279709583069 5357.720692493862 4940.588898005912 4773.070648205847 5095.568586698594 5436.761295752379 5694.149898726053 5451.845590067821 4891.316779245541 5151.9795735006555 5039.5415287969345 0.991217094062834 1.0631365297574766 0.9803647553600684 0.9471239835869155 1.0111174910617384 1.0788206158607192 1.129894429123871 1.0818138036793425 0.9705876519313497 1.022311165422733 1.0 12.29907677548707 -4.463060635020981 16.3553939693996 1.0090193448626135 1.0132927098604396 0.0 0.05593760002235416 705349.4915856717 0.0456864502209143 0.00823904146034433 3106720.7836157256 3.443018569133742e-05 4.463060635020981 0.004273364997826157 GPGQPS(ph)SPQR ddPTM_A549_MK2206_60min_R1 1 GPGQPSSPQR 10 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.5)S(0.5)PQR 44.309 0.058057000000000004 28555000.0 569.14 518.48 458.46 209.12 434.14 352.87 516.75 570.5 519.42 581.35 483.36 True False 665.1969178629512 544.868417392866 523.476521811354 260.3544093877534 370.27858110178045 390.2104691838511 610.6367860796569 651.3701220829747 401.77219934329696 450.0226312348902 363.3283719426548 1.8308422056506535 1.4996583241753116 1.4407807433601025 0.7165815540242089 1.0191292772484681 1.0739884339267596 1.680674654761163 1.7927862847600087 1.1058101441268942 1.238611311383958 1.0 8.505130218513962 -5.7475693504457155 2.1641677681046803 1.1315871976540988 1.760312533411803 0.23701103378832555 0.3037493709268141 0.32061261175914224 2.7971329359463173 0.04607224476696914 0.26546578183771175 1.7882599474761278e-06 5.7475693504457155 0.6287253357577043 GPGQPS(ph)SPQR ddPTM_A549_PD325901_60min_R1 1 GPGQPSSPQR 10 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.638)S(0.362)PQR 86.624 0.00074987 34757000.0 945.15 695.75 741.45 642.04 838.43 745.15 962.79 756.23 804.41 768.28 975.63 True False 1041.1009322173445 754.3832942348371 791.7692557010516 681.6973526213651 779.5415692264766 739.0817454536947 999.4295003089038 741.1463993990413 770.6034451111275 719.770669684515 855.6336950281316 1.2167600905234512 0.881666183342668 0.925360069737576 0.7967163478747201 0.9110692738682372 0.863782889510207 1.1680576701412448 0.8661959010095714 0.9006230698824823 0.841213563545847 1.0 9.740849487019158 -11.049058424740569 1.378778021430699 0.9997017692249437 0.9364762796108684 0.0 0.13184579577361702 1.413722675732857 4.829521148684676 0.08150340029388499 0.01855507672283129 8.931853172727844e-12 11.049058424740569 -0.06322548961407526 GPGQPS(ph)SPQRLDR ddPTM_A549_MK2206_60min_R1 2 GPGQPSSPQRLDR 13 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.5)S(0.5)PQRLDR;GPGQPS(0.5)S(0.5)PQRLDR 65.295 0.0045856000000000004 11123900.0 4334.4 4221.4 4288.4 3484.1 3472.7000000000003 2363.0 1970.16 1980.2 3725.1000000000004 5412.1 5823.200000000001 True False 5065.940754094206 4436.251228942764 4896.559604187522 4337.7046564071925 2961.870430257874 2613.051091567549 2328.1125698358906 2260.899414108163 2881.3707977623453 4189.502851133308 4377.13872785598 1.157363535648233 1.01350482695707 1.118666761239703 0.9909909020708368 0.6766681648467341 0.5969769874868645 0.5318800053148537 0.5165245048597311 0.6582772392899928 0.957132755348017 1.0 12.095772393751727 -6.613970306747975 4.6517334445613825 0.7592555175611617 1.0838244489413755 0.5524209835752585 0.15479425811544573 0.17934519881042785 6.836452626086921 0.028456809142773293 0.06081133914629315 2.432370307561526e-07 6.613970306747975 0.3245689313802138 GPGQPSS(ph)PQR ddPTM_A549_MK2206_60min_R1 1 GPGQPSSPQR 10 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.112)S(0.888)PQR 50.284 0.02748 27917000.0 198.6 294.04 352.92 373.6 585.25 348.55 515.57 489.31 403.99 591.51 408.05 True False 232.11882469617694 309.00538005361506 402.96936281826805 465.1320167715413 499.16050027598686 385.43332965123517 609.2423953538246 558.671190949028 312.48691003946453 457.8874801784633 306.7199233929169 0.7567777864851191 1.0074512820537271 1.3138023717554628 1.516471481950959 1.627414661409354 1.2566295837179255 1.9863150349492227 1.8214375667841909 1.018802126000664 1.4928520948797204 1.0 8.260778071562594 -8.93600642522281 24.70004840310725 1.0082948999078092 1.4189769762932396 0.031782604893078714 0.3589052122037528 60.19506708146 23233.533169915667 0.06002752277104967 0.06390362568813346 1.1587602126086714e-09 8.93600642522281 0.4106820763854304 GPGQPSS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 GPGQPSSPQR 10 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.001)S(0.999)PQR 110.84 0.00017639 37909000.0 878.9 971.17 1158.9 969.77 791.71 917.07 1007.7 942.25 966.89 823.49 936.94 True False 968.1252809880167 1053.0139042214116 1237.5499230318273 1029.670490392532 736.1030208512262 909.601685973589 1046.0485749345983 923.4560845691745 926.2549757505479 771.4947008623171 821.7023197520143 1.1781946548236497 1.2815028982018768 1.5060806003387137 1.2530942966100929 0.8958268744736884 1.1069722746408972 1.2730261918334251 1.123832880072517 1.1272390907087704 0.9388980441179117 1.0 9.682472029424657 -2.00000000000202 0.07841152632123698 0.8346049790498589 2.09140029389616 0.34876076206014983 0.1344335177366922 154.84504555819365 0.8616846900994352 2.096054974099473 21.14627104259328 0.009999999999953484 2.00000000000202 1.2567953148463011 GPGQPSS(ph)PQRLDR ddPTM_A549_MK2206_60min_R1 2 GPGQPSSPQRLDR 13 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.116)S(0.884)PQRLDR;GPGQPS(0.071)S(0.929)PQRLDR 87.13799999999999 5.4371000000000005e-05 103751000.0 4483.8 5343.7 5185.3 4511.0 6315.8 4461.4 4193.4 3665.3999999999996 6962.1 7303.2 6468.1 True False 5240.555821614895 5615.6715052118825 5920.653510771751 5616.195202506486 5386.754186489667 4933.502386762358 4955.286499751202 4184.981674816715 5385.195466189154 5653.402047707316 4861.892259521445 1.0778839887601133 1.155038245492637 1.2177673207745083 1.1551459601984857 1.1079542488709702 1.0147288593449746 1.0192094425882958 0.8607721955625239 1.1076336493559438 1.1627987100363633 1.0 12.247302207980116 -7.0548790879545855 3.18279008477019 1.03136679808356 1.155679941215824 0.37006566627979876 0.07608204475699336 0.20593957018653777 4.149761593678717 0.010835157715373744 0.020253097603452914 8.812942002147923e-08 7.0548790879545855 0.12431314313226416 GPGQPSS(ph)PQRLDR ddPTM_A549_PD325901_60min_R1 2 GPGQPSSPQRLDR 13 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.069)S(0.931)PQRLDR;GPGQPS(0.12)S(0.88)PQRLDR 73.296 0.00035037 147225000.0 6769.7 7005.3 8284.8 7805.5 7892.5 8592.5 8245.8 8290.2 8225.5 8169.1 8392.5 True False 7456.95496041026 7595.66121610249 8847.056348549551 8287.628007423307 7338.158027646869 8522.525528834296 8559.598431274897 8124.845457463918 7879.810839946771 7653.301631852676 7360.275704440817 1.013135276428723 1.0319805291423598 1.2020006727752992 1.1259942344853975 0.9969949934374601 1.1579084630881742 1.1629453535430023 1.103877868673017 1.0705863688220936 1.0398118140105896 1.0 12.845544093061187 -9.813274863280352 0.859122021661302 1.0086689129666364 1.1005527007047913 0.1793087510573671 0.06242539059594857 0.5399259851192288 0.8265922412946511 0.023471163458608498 0.012942201914082092 1.5371814562370532e-10 9.813274863280352 0.09188378773815487 GPGRPVS(ph)SPHELR ddPTM_A549_PD325901_60min_R1 2 GPGRPVSSPHELR 13 1 Q68D10-2;Q68D10 Q68D10-2 SPTY2D1 Protein SPT2 homolog 1 GPGRPVS(0.681)S(0.319)PHELR;GPGRPVS(0.5)S(0.5)PHELR 66.965 0.0012910999999999999 35259800.0 3729.29 3521.7400000000002 4174.91 3356.13 4766.88 4689.89 4434.51 4427.27 3800.9900000000002 4128.19 5131.2 True False 4107.884775441807 3818.529389347604 4458.244498373288 3563.430527775746 4432.070793643247 4651.697090768073 4603.267704706984 4338.964626723876 3641.247608598781 3867.535378878685 4500.094929356771 0.9128440266101174 0.8485441861319606 0.9907001004111117 0.7918567460720415 0.9848838442785368 1.0336886585263596 1.0229267997608575 0.964194021423471 0.8091490659107605 0.8594341762989205 1.0 12.135739720030559 -5.736306953616887 24.998396167425206 0.9287830812219952 0.8806941434354002 0.05949313903521081 0.08152671453975957 706.242648399287 702465.2440613153 0.012798546396723173 0.04952834550404279 1.8352407608594005e-06 5.736306953616887 -0.048088937786594954 GPGRPVSS(ph)PHELR ddPTM_A549_MK2206_60min_R1 4 GPGRPVSSPHELR 13 1 Q68D10-2;Q68D10 Q68D10-2 SPTY2D1 Protein SPT2 homolog 1 GPGRPVS(0.022)S(0.978)PHELR;GPGRPVS(0.092)S(0.908)PHELR;GPGRPVS(0.034)S(0.966)PHELR;GPGRPVS(0.352)S(0.648)PHELR 110.97 1.339e-05 41967000.0 3850.75 4108.95 4102.3099999999995 4109.0199999999995 4336.37 3951.96 3577.51 3797.92 5804.44 6269.849999999999 7132.62 True False 4500.662458201428 4318.078004255546 4684.079243973163 5115.730084460919 3698.4957173546045 4370.153784101263 4227.49725896049 4336.286790642196 4489.743607786008 4853.48653040006 5361.393603702456 0.8394575722053634 0.8054021628394491 0.8736682269957656 0.9541791673209952 0.6898384992291011 0.8151152679936304 0.7885071627722086 0.8087984414439663 0.8374210027567262 0.9052658486122624 1.0 12.388392338297416 -10.395039520502666 0.7258909416809662 1.0024040033431354 0.8218193640722423 0.33518416024721664 0.06572678375802148 0.42806231109312914 0.40447822165618996 0.04280466005977345 0.012292803382461172 4.026803890164345e-11 10.395039520502666 -0.18058463927089308 GPGRPVSS(ph)PHELR ddPTM_A549_PD325901_60min_R1 2 GPGRPVSSPHELR 13 1 Q68D10-2;Q68D10 Q68D10-2 SPTY2D1 Protein SPT2 homolog 1 GPGRPVS(0.169)S(0.831)PHELR;GPGRPVS(0.01)S(0.99)PHELR 106.52 3.8880999999999996e-05 45509000.0 3895.76 4712.2 4126.4 4359.2 5638.299999999999 4975.0 4057.2599999999998 5734.9 5459.700000000001 5624.2 6097.4 True False 4291.254687293066 5109.31363146734 4406.442318058964 4628.457883538491 5242.28525907904 4934.485249455992 4211.661249517863 5620.512920557981 5230.24779561818 5269.087052168023 5347.458454603211 0.8024849045061881 0.9554657927391899 0.8240255357693897 0.8655434956309406 0.9803321154494177 0.9227720591654671 0.7876005555297717 1.051062475430682 0.9780810529001617 0.9853441774067969 1.0 12.384637653530527 -8.274034397783549 24.999822097737546 0.9939661588416411 0.8831850889148584 0.5057850293173392 0.05978161529729864 508.72097635053046 1009756.7186272923 0.0092752919736455 0.011251102480031616 5.3206611592705345e-09 8.274034397783549 -0.11078106992678272 GPGS(ph)PPRT(ph)PPAPGPPSFEEQLR ddPTM_A549_MK2206_60min_R1 1 GPGSPPRTPPAPGPPSFEEQLR 22 1 A0A6E1YH78;Q6ZTN6-2;Q6ZTN6;Q6ZTN6-3 A0A6E1YH78 ANKRD13D Ankyrin repeat domain-containing protein 13D 2 GPGS(1)PPRT(1)PPAPGPPSFEEQLR 51.963 0.004982100000000001 4600200.0 1117.8 1109.6 1219.9 1118.8 1443.7 1429.3 1268.3 1106.4 1806.3 1457.9 1843.7 True False 1306.457312413829 1166.073900515207 1392.900163498824 1392.9060502248412 1231.333642457825 1580.5475773074456 1498.733692858884 1263.2355882078937 1397.17593406838 1128.559377444476 1385.8584064686215 0.9427062002263863 0.8414091187616641 1.0050811518675604 1.0050853995785747 0.8884988803404893 1.1404827289210027 1.0814479212763777 0.9115185088978971 1.0081664386108515 0.8143395978815883 1.0 10.436564149120859 -5.778410733786218 24.505812585108472 1.004506232538304 0.8920576824969675 0.10170404056137405 0.08936255457266078 145.90532321901878 210681.30564638993 0.008877509624337063 0.027709838702256774 1.6656711597375794e-06 5.778410733786218 -0.11244855004133658 GPGS(ph)PPRT(ph)PPAPGPPSFEEQLR ddPTM_A549_PD325901_60min_R1 2 GPGSPPRTPPAPGPPSFEEQLR 22 1 A0A6E1YH78;Q6ZTN6-2;Q6ZTN6;Q6ZTN6-3 A0A6E1YH78 ANKRD13D Ankyrin repeat domain-containing protein 13D 2 GPGS(0.995)PPRT(0.997)PPAPGPPS(0.008)FEEQLR;GPGS(1)PPRT(1)PPAPGPPSFEEQLR 71.085 0.00023787 16696400.0 3206.8 3946.0 3299.8 4134.2 3215.7 3464.5 3548.6000000000004 3885.1000000000004 3492.5 4386.0 5019.0 True False 3532.351975278613 4278.543268488204 3523.744271309366 4389.560144550565 2989.8403255627536 3436.286260651312 3683.6439148684285 3807.608632698009 3345.722370495907 4109.067211480556 4401.694818062373 0.8024981561155925 0.9720217882737313 0.8005426130066234 0.9972431815440695 0.6792475283143055 0.7806734457260638 0.8368694485025586 0.8650324000367928 0.7600986685325664 0.9335193331938828 1.0 12.103843407235784 -10.94823452680379 1.1864763568655066 1.0008026400485805 0.8288444246202714 0.24807920206110734 0.08774834875258107 0.4304323543781142 1.068704737482723 0.06074941307029855 0.013902717324582247 1.1265889136739076e-11 10.94823452680379 -0.17195821542830914 GPGT(ph)PGPVAR ddPTM_A549_MK2206_60min_R1 2 GPGTPGPVAR 10 0 Q8N6S5 Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 1 GPGT(1)PGPVAR;GPGT(1)PGPVAR 113.93 0.00010548 57833000.0 5908.7 6959.799999999999 6372.9 6394.2 7905.9 6995.700000000001 6054.5 6775.6 8838.6 10030.5 9334.599999999999 True False 6905.944106154585 7314.024092290677 7276.673048579113 7960.779287046541 6742.9525828824035 7735.980330630169 7154.524279282594 7736.062049404739 6836.671212343894 7764.603083515207 7016.561198146108 0.9842348568098074 1.0423943988720805 1.0370711297297217 1.1345699213953855 0.9610053119274444 1.1025315838012135 1.01966249238629 1.1025432303574485 0.9743620869650871 1.1066108973106006 1.0 12.776548426601416 -8.789846904880271 24.995217662366088 0.98789319834129 1.0483091422533568 0.0 0.06064447827860681 201.09398436792173 176937.62722614856 0.007738181207661219 0.0082386416256493 1.6223819097803508e-09 8.789846904880271 0.06041594391206684 GPGT(ph)PGPVAR ddPTM_A549_PD325901_60min_R1 2 GPGTPGPVAR 10 0 Q8N6S5 Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 1 GPGT(1)PGPVAR;GPGT(1)PGPVAR 89.31700000000001 0.00072632 77551000.0 12933.3 12918.9 12839.7 13593.1 15257.3 12849.2 12786.0 14390.7 13063.5 13376.400000000001 16318.2 True False 14246.279095007752 14007.621041883489 13711.079253388347 14432.714914830029 14185.679882827568 12744.560375338677 13272.578226767662 14103.66619921424 12514.48652454497 12531.8118211693 14311.164849592631 0.9954660745462152 0.9787897204106497 0.9580687105130115 1.0084933732868613 0.9912316734462998 0.8905327071053515 0.9274282258823584 0.9855009251476621 0.8744561785200312 0.875666792527096 1.0 13.804853483782876 -7.207943994685572 24.994019128600982 0.9388234250332862 0.9856389393004564 0.3344980650676914 0.040420874570565944 443.88261471943304 207389.8626925565 0.007148182161430153 0.01238101286423 6.195209614916649e-08 7.207943994685572 0.04681551426717023 GPGVDVNLKGPRIS(ph)APNVDFNLEGPK ddPTM_A549_PD325901_60min_R1 2 GPGVDVNLKGPRISAPNVDFNLEGPK 26 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPGVDVNLKGPRIS(1)APNVDFNLEGPK;GPGVDVNLKGPRIS(1)APNVDFNLEGPK 123.75 3.3469e-18 6193400.0 3639.8999999999996 4287.6 4556.9 4851.9 4694.0 6777.0 4978.7 6154.299999999999 5550.4 5309.5 5337.1 True False 4009.4199684472424 4648.9310993335075 4866.158636865761 5151.590843535607 4364.309633420896 6721.810358907187 5168.167152949179 6031.547658545045 5317.135990035929 4974.257263875058 4680.67053466441 0.8565909390020132 0.9932190409267551 1.0396285320292575 1.100609582619333 0.9324112007242149 1.4360785082236343 1.1041510216697448 1.2886076073665562 1.1359774097873248 1.0627232203241788 1.0 12.192499504158896 -5.176160241664367 0.9845590482573664 1.104927263506642 0.6985712393113982 0.2861090633568468 0.1302878673477215 2.5469590587689828 1.6858097090785242 0.02034834234503012 1.1362191779808548 6.665607828584688e-06 5.176160241664367 -0.40635602419524386 GPHHLDNS(ph)SPGPGSEAR ddPTM_A549_MK2206_60min_R1 4 GPHHLDNSSPGPGSEAR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPHHLDNS(0.5)S(0.5)PGPGSEAR;GPHHLDNS(0.5)S(0.5)PGPGS(0.001)EAR;GPHHLDNS(0.65)S(0.35)PGPGSEAR;GPHHLDNS(0.499)S(0.499)PGPGS(0.003)EAR 132.67 1.1219e-12 57455300.0 1897.23 1774.88 1846.71 1872.8899999999999 2099.04 1748.77 1406.83 1477.09 2654.04 2925.2599999999998 3775.54 True False 2217.436041179899 1865.213810874576 2108.6012467701566 2331.748134077227 1790.2739965814753 1933.8236806604234 1662.43280069752 1686.4720308984083 2052.9041776309814 2264.4417343186965 2837.9692183969923 0.7813460508329272 0.6572353916960838 0.7429965177568718 0.8216255902149281 0.6308292510630892 0.6814110837159575 0.585782534187081 0.5942531088659941 0.723370840079284 0.7979091949410752 1.0 11.470643226172305 -10.30205132817857 0.8073323669308308 0.991855519814897 0.6884444712039849 0.3839599280950208 0.09025572837574873 0.2567986165548943 0.31760115481753903 0.0432676916542533 0.015088712202357338 4.988255290343802e-11 10.30205132817857 -0.30341104861091206 GPHHLDNS(ph)SPGPGSEAR ddPTM_A549_PD325901_60min_R1 2 GPHHLDNSSPGPGSEAR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPHHLDNS(0.5)S(0.5)PGPGSEAR;GPHHLDNS(0.814)S(0.186)PGPGSEAR 152.0 1.7698e-17 72485000.0 2490.2 2776.8 2028.79 2413.1 3382.8999999999996 3379.8 2536.3 2823.5 3435.1 3060.5 3324.3 True False 2743.0032708116505 3010.8106811804473 2166.4758895053405 2562.1517064522714 3145.2967743714416 3352.2760293691194 2632.8202844166135 2767.183077507101 3290.734692882028 2867.259507691804 2915.4321744739464 0.9408564859879107 1.032715049090007 0.7431062565865572 0.8788239798151298 1.0788440910785282 1.1498384557596495 0.9030634660165515 0.9491502157845277 1.1287296345612294 0.983476663527309 1.0 11.509494044504853 -6.758890168690683 24.915887723691014 1.0492668155293228 0.8973090225854911 0.28028070605893185 0.09525540093817948 56.60993879091725 553290.8156288085 0.014206458423599327 0.028528496811155934 1.7422474249749607e-07 6.758890168690683 -0.15195779294383172 GPIAQWADGAIS(ph)PNGHRPQLR ddPTM_A549_MK2206_60min_R1 2 GPIAQWADGAISPNGHRPQLR 21 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 GPIAQWADGAIS(1)PNGHRPQLR;GPIAQWADGAIS(1)PNGHRPQLR 66.52 0.00051612 25403000.0 1684.96 2262.14 2053.44 1803.4399999999998 3456.8 3096.3799999999997 2674.83 2848.76 3856.4 4095.95 4095.3 True False 1969.340054683134 2377.2732636188434 2344.64866934587 2245.2828809594985 2948.3092991952703 3424.0368763893016 3160.8119874396675 3252.5804539616056 2982.931557405357 3170.672050239182 3078.3239854699473 0.6397442452382048 0.772262203341771 0.7616640354988262 0.7293848508336026 0.9577644566041906 1.1123055573588616 1.0267964003656125 1.0566075790963425 0.9690115697649586 1.0299994624364195 1.0 11.587929364162193 -6.804872137071882 4.50204853152258 1.0033453283317917 0.730052418015785 0.8862449596962545 0.050924817010373824 0.05405029813247924 2.3751007419269765 0.007652007900126921 0.015177373411873031 1.567212413460904e-07 6.804872137071882 -0.27329291031600667 GPIAQWADGAIS(ph)PNGHRPQLR ddPTM_A549_PD325901_60min_R1 1 GPIAQWADGAISPNGHRPQLR 21 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 GPIAQWADGAIS(1)PNGHRPQLR 89.197 8.412399999999999e-07 6364900.0 3236.1 2988.9 3393.1 4045.3 3942.2 4195.7 3571.2 3575.4 3866.9 3899.9 4472.1 True False 3564.6264897090946 3240.7850925454622 3623.376170367843 4295.168993457115 3665.3134718516935 4161.531610279902 3707.103970235624 3504.0858421529624 3704.3876405069777 3653.6596484389042 3922.0600509776327 0.9088658621686727 0.826296652887211 0.9238451536367123 1.0951308591989761 0.934537825584302 1.0610575963115552 0.94519306743189 0.893429931364645 0.944500490140023 0.9315664729631496 1.0 11.937395909581335 -5.999464888516292 24.941879043697305 0.9765905357445064 0.8694536300503382 0.3399902897712105 0.058680335227090236 14.257920716529531 664404.5610699606 0.007622255810776876 0.023394539457838995 1.001232899121489e-06 5.999464888516292 -0.10713690569416823 GPIHS(ph)PVELK ddPTM_A549_MK2206_60min_R1 4 GPIHSPVELK 10 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 GPIHS(1)PVELK;GPIHS(1)PVELK;GPIHS(1)PVELK;GPIHS(1)PVELK 122.39 1.1274e-05 44858700.0 5802.799999999999 5584.299999999999 6002.799999999999 4607.1 7380.699999999999 5252.2 5343.299999999999 5532.6 8015.2 8098.499999999999 7961.799999999999 True False 6782.170775161 5868.517017526192 6854.087303427119 5735.839706820581 6295.008807154165 5807.984317871807 6314.108445204508 6316.862992876895 6199.769997644288 6269.043225347474 5984.665325498654 1.1332581533447563 0.980592346997652 1.1452749536760476 0.9584228014191687 1.051856447232436 0.970477712951789 1.0550478768298384 1.0555081444509282 1.0359426401388137 1.0475177615425177 1.0 12.54705485568322 -3.9683443113283685 2.525668623485477 1.0240314345576174 45.357464531441764 0.24033125282936008 0.050600318141198544 722.2781707805367 12.584640684245105 0.006835236808244171 184459.77642149662 0.00010756121236197094 3.9683443113283685 44.33343309688415 GPIHS(ph)PVELK ddPTM_A549_PD325901_60min_R1 2 GPIHSPVELK 10 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 GPIHS(1)PVELK;GPIHS(1)PVELK 101.89 0.000127 48904000.0 3017.7 3177.0 3512.2 2901.7 3029.7 2836.9 3448.8 3909.8 4571.3 4540.3 4679.9 True False 3324.054682486674 3444.73693968247 3750.559012574325 3080.931418761158 2816.904323897588 2813.797226971197 3580.045971255774 3831.815971821235 4379.184158123963 4253.624683147554 4104.301968330362 0.8098952533550805 0.8392990979374249 0.9138116643254833 0.7506590505606698 0.6863296964096212 0.6855726622171163 0.8722667091457074 0.9336096616156206 1.0669741631864929 1.036382000147503 1.0 12.002921163800577 -8.31097579694753 2.24704514889627 1.0307121566420352 0.7852551999384253 0.726558353060212 0.06611464028497838 0.12540136495542284 1.2399360707430978 0.01256224495964691 0.015828984086281396 4.886795924962482e-09 8.31097579694753 -0.2454569567036099 GPILGS(ph)PHTPLFLPHGLEPEAGGTLPSR ddPTM_A549_PD325901_60min_R1 2 GPILGSPHTPLFLPHGLEPEAGGTLPSR 28 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 GPILGS(0.992)PHT(0.008)PLFLPHGLEPEAGGTLPSR;GPILGS(0.997)PHT(0.003)PLFLPHGLEPEAGGTLPSR 124.9 6.4125e-21 7316700.0 2607.8 2552.6000000000004 2279.27 2793.2 2639.2 2803.1000000000004 2853.0 2729.2 3396.8999999999996 2985.3 3105.1 True False 2872.5419362391067 2767.7165603504795 2433.954968563942 2965.729620182536 2453.8316967457217 2780.2724829648446 2961.572476221504 2674.7639649840203 3254.1401060379503 2796.807648525514 2723.1923848506613 1.0548435550199424 1.0163499926584365 0.8937873732697806 1.0890635699046196 0.9010864272376 1.0209607291911231 1.0875369998450974 0.9822163060766282 1.1949725344933373 1.0270327076722088 1.0 11.41108319244433 -7.654195757778535 4.179233080841774 1.0841644988790944 0.9898632817002762 0.1075374238081761 0.07691362287624554 0.279066728767482 8.867003284268803 0.013663408444470884 0.02045827885164182 2.2171967954160537e-08 7.654195757778535 -0.09430121717881823 GPKEPGFEAGPEAS(ph)DDDLWTR ddPTM_A549_PD325901_60min_R1 1 GPKEPGFEAGPEASDDDLWTR 21 1 H9KVB4;O15417;O15417-2;H7C177 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GPKEPGFEAGPEAS(0.999)DDDLWT(0.001)R 64.315 0.00013269 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GPKPEPPGSGS(ph)PAPPR ddPTM_A549_MK2206_60min_R1 4 GPKPEPPGSGSPAPPR 16 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GPKPEPPGS(0.064)GS(0.936)PAPPR;GPKPEPPGS(0.032)GS(0.968)PAPPR;GPKPEPPGS(0.212)GS(0.788)PAPPR;GPKPEPPGS(0.149)GS(0.851)PAPPR 107.78 1.9284000000000002e-07 199266000.0 12268.4 12865.8 11586.6 11725.8 15905.699999999999 11705.7 12368.0 12304.7 18080.199999999997 20315.7 19208.3 True False 14339.005986417813 13520.614265725068 13229.754106398457 14598.621526391169 13565.99260015339 12944.389404385209 14615.105506014901 14048.928906563342 13985.06356814655 15726.369260133566 14438.34898788913 0.9931195040683221 0.9364376963783146 0.916292722768757 1.0111004754516237 0.9395805996608426 0.8965283645133489 1.0122421558222505 0.9730287665402441 0.968605453426649 1.089208279514841 1.0 13.817618160336579 -9.828719266935385 0.3438693875958913 1.0061924156044637 0.9517815460588904 0.2572043240830043 0.04430314789992214 2.3038188776292214 0.5557202442957541 0.04785698121399905 0.01650304444928931 1.4834767120854618e-10 9.828719266935385 -0.05441086954557328 GPKPEPPGSGS(ph)PAPPR ddPTM_A549_PD325901_60min_R1 2 GPKPEPPGSGSPAPPR 16 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GPKPEPPGS(0.008)GS(0.992)PAPPR;GPKPEPPGS(0.012)GS(0.988)PAPPR 137.23 4.219e-11 309210000.0 9793.599999999999 10534.0 11281.9 11216.3 13274.2 12295.8 10360.8 12872.1 13447.8 12302.8 12844.7 True False 10787.839062332734 11421.737149076222 12047.557577575955 11909.105376934484 12341.865985503973 12195.6670814595 10755.085913647308 12615.355867532893 12882.635731984208 11525.999108391015 11264.883329261957 0.9576520898631911 1.013924140643944 1.0694791260093128 1.0571885237372214 1.0956053094171352 1.0826270210699578 0.9547445454414618 1.119883402144336 1.1436102226216525 1.0231796257002306 1.0 13.459544751163905 -5.458854627586326 2.112517243211866 1.0674637321428964 0.9482326414381398 0.2612460418676419 0.0513426426362146 0.5262928820948581 3.4581627065633236 0.008581983227647251 0.10111236522387682 3.4765251251230697e-06 5.458854627586326 -0.11923109070475657 GPKPEPPGSGS(ph)PAPPRR ddPTM_A549_MK2206_60min_R1 2 GPKPEPPGSGSPAPPRR 17 2 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GPKPEPPGS(0.033)GS(0.967)PAPPRR;GPKPEPPGS(0.296)GS(0.704)PAPPRR 102.07 3.2577e-09 22841000.0 3136.4 3320.3 3182.3999999999996 3378.3 4835.3 3181.7 2847.3 3151.8 4610.8 5212.4 5526.0 True False 3665.747642382119 3489.2890878520534 3633.7121733901645 4205.9836516576515 4124.033775283177 3518.385382158471 3364.6175539518276 3598.577301982684 3566.4611619346083 4034.915219830981 4153.741690158704 0.8825169969204465 0.8400351654314683 0.8748045604278608 1.0125770848059046 0.992847914701602 0.8470400050379739 0.8100208931921509 0.8663459527366978 0.8586140949458855 0.971392908083511 1.0 12.020195786373238 -10.810709781291939 1.0622821585215003 0.9998581734002224 0.8866803124465055 0.2872548424198359 0.05936325122779457 0.5315139765976269 1.0667685653709016 0.04447490827223209 0.01111649302006421 1.546287405975152e-11 10.810709781291939 -0.11317786095371696 GPKS(ph)DDDGFEIVPIEDPAK ddPTM_A549_MK2206_60min_R1 3 GPKSDDDGFEIVPIEDPAK 19 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 GPKS(1)DDDGFEIVPIEDPAK;GPKS(1)DDDGFEIVPIEDPAK;GPKS(1)DDDGFEIVPIEDPAK 90.1 2.0079000000000001e-07 6539600.0 1248.6 1357.2 1590.4 1421.7 2248.4 1540.9 1584.5 1635.1 2478.7 2013.0 2184.7 True False 1459.3331546608592 1426.2756829300988 1815.942634665571 1770.016563822538 1917.6633384374695 1703.9570152333624 1872.3831398997888 1866.8804322837389 1917.2784076705386 1558.261901910782 1642.1786953473961 0.8886567331529919 0.8685264806875211 1.1058130517771794 1.0778465028424318 1.1677555821851626 1.0376197304599042 1.1401823353357377 1.1368314773373722 1.167521179700207 0.948899109655748 1.0 10.681395408650197 -5.760976961265418 24.999005557076877 1.09289605490828 0.8785915340934786 0.5938906317515567 0.06630192858322223 5.6653206426032945 306173.7895496947 0.009205134148476875 0.03179467606313419 1.7338959761496964e-06 5.760976961265418 -0.21430452081480145 GPKS(ph)DDDGFEIVPIEDPAK ddPTM_A549_PD325901_60min_R1 1 GPKSDDDGFEIVPIEDPAK 19 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 GPKS(1)DDDGFEIVPIEDPAK 106.11 4.0668000000000004e-10 17960000.0 4724.0 4490.9 5276.7 5630.4 5383.7 4794.2 5024.4 5547.9 5430.4 4974.5 5911.3 True False 5203.577002375004 4869.363903814921 5634.808593374789 5978.177020433823 5005.567484756725 4755.157624711945 5215.606291457174 5437.242782256646 5202.179172724688 4660.409221046518 5184.247574818112 1.003728492375785 0.9392614518387004 1.086909626142321 1.1531426565104899 0.9655340360423169 0.9172319716769657 1.006048846276436 1.0488007572530735 1.0034588621873841 0.8989557604625058 1.0 12.339918900730636 GPLPAAPPVAPER ddPTM_A549_PD325901_60min_R1 2 GPLPAAPPVAPER 13 0 Q9NQC3-5;Q9NQC3;Q9NQC3-2;F8W914 Q9NQC3-5 RTN4 Reticulon-4;Reticulon 0 ; 117.02 4.4103e-05 7050500.0 6499.8 7618.8 7715.6 6721.0 8860.7 8255.4 6867.5 8277.0 8462.3 8955.2 9775.7 False True 7159.654911100142 8260.863014180926 8239.227013671903 7136.140905501516 8238.35499975554 8188.17075946915 7128.846470540191 8111.908741819115 8106.658959440949 8389.76714369601 8573.350873268046 0.8351057849999062 0.9635512574130769 0.9610276233254432 0.8323630994448399 0.9609259111793695 0.9550723959053281 0.8315122728463312 0.9461771554354877 0.945564818152695 0.9785867005461709 1.0 13.065643473059193 -9.615402646615204 0.6262985958274156 0.9965130689570882 0.9107193637722386 0.2539320659784169 0.05185064932565339 0.6328685603845361 0.5386650549687049 0.023129114222597252 0.012233300219121751 2.4243613592844385e-10 9.615402646615204 -0.08579370518484963 GPLS(ph)PFNSR ddPTM_A549_MK2206_60min_R1 2 GPLSPFNSR 9 0 A1L390-3;A1L390;A0A0U1RR71;G3V3I3;G3V278 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 GPLS(0.999)PFNS(0.001)R;GPLS(1)PFNSR 71.221 0.0032015 140881000.0 2348.1 2423.2 2387.3999999999996 1542.37 2748.7 2347.8 2235.0 2407.4 3259.5 3178.2 3496.0 True False 2744.401874466732 2546.5305296759634 2725.969219064756 1920.2507192396213 2344.369871180872 2596.242637656492 2641.0705696914038 2748.6563223532935 2521.228454351925 2460.2424126442356 2627.8467153085103 1.0443538652689406 0.9690559631355817 1.0373395081169057 0.7307316321204006 0.8921258068530995 0.9879733937798165 1.0050322015762403 1.045972851590242 0.9594275189890334 0.9362199089894032 1.0 11.359665409061344 -7.295908574059649 21.07758329442571 0.9882841174696391 0.9309971000748072 0.09687225223337326 0.08230398753588666 173.27717798651165 105956.73561723213 0.01227371349837228 0.019622784933241332 5.059311574004849e-08 7.295908574059649 -0.057287017394831885 GPLS(ph)PFNSR ddPTM_A549_PD325901_60min_R1 2 GPLSPFNSR 9 0 A1L390-3;A1L390;A0A0U1RR71;G3V3I3;G3V278 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 GPLS(1)PFNSR;GPLS(0.998)PFNS(0.002)R 89.82700000000001 0.0010791 209713000.0 3536.3999999999996 4231.5 4581.1 4140.1 5508.0 4977.6 4953.5 4796.8 4132.0 4531.4 5177.8 True False 3895.412724639915 4588.10335545054 4892.000994392183 4395.824574150699 5121.137081568443 4937.064075918022 5142.008153159207 4701.124060983198 3958.3464094170627 4245.286630666436 4540.963424778509 0.857838383675138 1.010381041700271 1.077304645903594 0.9680378727924044 1.1277644417094668 1.087228328900014 1.1323606186962438 1.0352701885531046 0.8716974877660759 0.9348867703935548 1.0 12.14878270127389 -8.660732542818048 8.665590030752947 0.9394878883008522 1.0434882776874082 0.2466954596280383 0.07839919835270047 0.28322154747839584 22.0972592223689 0.014417694672049116 0.016343722685456592 2.1840745446046554e-09 8.660732542818048 0.10400038938655598 GPNGRDPLLEVY(ph)DVPPSVEK ddPTM_A549_PD325901_60min_R1 2 GPNGRDPLLEVYDVPPSVEK 20 1 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 GPNGRDPLLEVY(1)DVPPSVEK;GPNGRDPLLEVY(1)DVPPSVEK 90.316 3.3039e-06 6012200.0 2963.2 2863.89 2719.98 3020.87 3765.9 2912.88 3487.8 3442.6 2961.5 3222.0 3669.5 True False 3264.0218826074542 3105.240061122828 2904.5741993684614 3207.4622790064536 3501.3961756497097 2889.1584710422867 3620.5301375973936 3373.9346423325446 2837.0384538936646 3018.5623701300397 3218.1747628770418 1.0142463113747824 0.9649072191302469 0.9025532835798444 0.9966712547764152 1.0880068466261505 0.8977630750106886 1.1250259555079747 1.0484000686514159 0.8815675539501646 0.9379734142938375 1.0 11.652026958358615 -8.751089266530569 24.99532667719236 0.9440735640483581 1.0029216493611561 0.14409503222458286 0.07008681646795985 351.34171228526895 848482.7348530728 0.012883770490811979 0.014529881516757458 1.7738248447488607e-09 8.751089266530569 0.05884808531279806 GPPAS(ph)SPAPAPKFS(ph)PVTPK ddPTM_A549_MK2206_60min_R1 1 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 2 GPPAS(0.501)S(0.501)PAPAPKFS(0.987)PVT(0.011)PK 65.21300000000001 0.0005903 4343000.0 1676.9 1581.6 2025.6 1672.4 2623.1 1938.2 1788.0 1974.4 2727.2 2734.0 3829.9 True False 1959.9197237312128 1662.0966844402042 2312.860538718926 2082.138075076889 2237.245464799558 2143.299037526967 2112.856455753124 2254.277246346409 2109.4935544434948 2116.3875011545365 2878.8301301373153 0.6808042278054551 0.5773514272483056 0.8034029220781451 0.7232584004453138 0.7771370187420003 0.744503475592266 0.7339288392303801 0.7830532349746123 0.7327606906569634 0.7351553948942408 1.0 11.491266947603473 -14.999999999999998 0.20232705149189495 2.3158045583111693 0.6817643301718321 0.0 0.09741680961093557 15.266342401948213 0.1806743036656907 7.9396828787508715 0.045658625883824897 1.000000000000004e-15 14.999999999999998 -1.6340402281393371 GPPAS(ph)SPAPAPKFS(ph)PVTPK ddPTM_A549_PD325901_60min_R1 1 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 2 GPPAS(0.5)S(0.5)PAPAPKFS(0.997)PVT(0.002)PK 102.67 6.1732e-10 9804500.0 4716.1 4832.2 4904.6 5262.9 6354.2 5343.0 5122.3 5529.5 4766.3 5960.1 5630.0 True False 5194.8750001906765 5239.4264526073775 5237.455649755713 5587.977380086881 5907.902912799965 5299.488379466001 5317.231929530115 5419.209784691168 4565.98898625473 5583.778268842968 4937.545691510489 1.0521168460522066 1.0611398415240867 1.060740695273136 1.1317317811751555 1.1965262261689826 1.0733041698384338 1.0768977669761013 1.0975513186660415 0.9247487054358594 1.1308813361349948 1.0 12.269578383443866 -8.751254384464982 24.97663304840981 0.964464666725902 1.0950122311897204 0.07009547245079584 0.06547432617474892 98.84978879006168 242408.69976512756 0.008236724283326283 0.009287715426050128 1.7731505681106168e-09 8.751254384464982 0.13054756446381832 GPPASS(ph)PAPAPK ddPTM_A549_MK2206_60min_R1 2 GPPASSPAPAPK 12 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.057)S(0.943)PAPAPK;GPPAS(0.07)S(0.93)PAPAPK 180.2 7.7489e-17 404320000.0 20180.0 21074.2 20658.1 16550.3 27045.0 21069.0 20471.1 21021.9 30275.0 28277.0 30552.0 True False 23585.89064636883 22146.78676481394 23587.729213521645 20605.124242971197 23066.716326294863 23298.50759552968 24190.43388778958 24001.818701868695 23417.760839240535 21889.2060607706 22965.09520769609 1.0270321299806628 0.9643672958687357 1.0271121891807746 0.8972366130694718 1.0044250249206335 1.0145182236266914 1.053356568697475 1.0451434442050638 1.0197110278642671 0.9531511131482296 1.0 14.487155144183259 -6.985686335904739 24.99949869358411 1.0162259358652188 0.9775241212869153 0.14244876755149605 0.04045298957281098 289.4476678361522 505530.77579933085 0.004985920880254273 0.009420042899613667 1.0335075749959246e-07 6.985686335904739 -0.03870181457830346 GPPASS(ph)PAPAPK ddPTM_A549_PD325901_60min_R1 4 GPPASSPAPAPK 12 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.07)S(0.93)PAPAPK;GPPAS(0.066)S(0.934)PAPAPK;GPPAS(0.112)S(0.888)PAPAPK;GPPAS(0.159)S(0.841)PAPAPK 185.25 2.9601999999999997e-19 711970000.0 45486.600000000006 44405.899999999994 44553.4 45961.4 53272.0 50609.0 49043.2 48980.7 49247.0 49295.2 51703.0 True False 50104.36614653493 48148.14103551957 47577.06164535869 48800.331292087074 49530.35849842309 50196.85708336047 50909.56581346876 48003.74151388416 47177.31985105569 46182.69265922852 45343.85877232094 1.1049868163650844 1.0618448085170562 1.049250393184467 1.0762280188177555 1.0923278221009654 1.1070265840277784 1.1227444507776492 1.0586602643352196 1.0404346063254313 1.0184993935147757 1.0 15.468619549516697 -9.063764149557839 1.1747367671794957 1.0117314810840896 1.0852673002476438 0.6577349917076001 0.021484784926646714 0.1901326576971284 0.539037056575193 0.00548032467384059 0.0050928038639806664 8.634473291047241e-10 9.063764149557839 0.07353581916355423 GPPASS(ph)PAPAPKFS(ph)PVTPK ddPTM_A549_PD325901_60min_R1 1 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 2 GPPAS(0.458)S(0.542)PAPAPKFS(0.996)PVT(0.004)PK 108.64 2.8248999999999997e-10 10254000.0 4250.6 4442.4 4703.8 4442.3 5767.9 5034.1 5633.0 4989.0 5481.2 4643.5 5099.3 True False 4682.117782873664 4816.776638604156 5023.028154247223 4716.6907818046975 5362.782602174769 4993.103958650536 5847.366897495874 4889.490481205213 5250.844225386444 4350.308617535331 4472.118427126009 1.0469574675111208 1.0770682210443252 1.1231876427465841 1.0546882553903794 1.199159344628792 1.116496362968486 1.307516111833752 1.0933275942666452 1.1741290645473539 0.9727623917891283 1.0 12.126742677665455 -4.344540540495871 16.27834300639785 1.1053083778785056 1.1124139047269803 0.0 0.09067607769250109 0.0 0.0 0.012076338789929524 0.0 4.5233423589188484e-05 4.344540540495871 0.007105526848474764 GPPASSPAPAPKFS(ph)PVTPK ddPTM_A549_MK2206_60min_R1 2 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPASS(0.001)PAPAPKFS(0.975)PVT(0.025)PK;GPPASSPAPAPKFS(0.998)PVT(0.002)PK 138.22 1.0904000000000001e-17 212318000.0 8070.3 9537.1 7888.4 8420.599999999999 11360.3 8121.3 9034.9 8454.2 13752.2 12498.5 13085.4 True False 9432.369340108542 10022.497653752325 9007.09373698183 10483.647378015097 9689.214918898406 8980.690575517363 10676.424380360122 9652.608739901643 10637.348657750741 9675.080169414765 9835.93404133237 0.9589703733750169 1.0189675542389753 0.9157334422061388 1.0658517364960887 0.9850833564135929 0.9130490848941117 1.085450993824873 0.981361678447582 1.0814782422341063 0.9836463043324947 1.0 13.263846345077807 -7.773293276471818 24.999971256040038 1.0374638140584547 0.9799364796262988 0.17187804253980643 0.051921483054529385 250.67079569572178 528666.0354656766 0.00785952485732862 0.01090578850603442 1.6854144906619395e-08 7.773293276471818 -0.05752733443215585 GPPASSPAPAPKFS(ph)PVTPK ddPTM_A549_PD325901_60min_R1 2 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPASSPAPAPKFS(0.955)PVT(0.044)PK;GPPASSPAPAPKFS(0.5)PVT(0.5)PK 145.83 2.8524e-21 424470000.0 11659.2 11943.8 14544.900000000001 12511.0 15231.7 15758.300000000001 16788.199999999997 16711.5 14944.9 14677.7 15649.800000000001 True False 12842.833400950603 12950.345942769738 15532.004379588947 13283.776055457434 14161.877938512356 15629.969629447709 17427.084137855538 16378.176022581873 14316.8178252897 13750.947517088041 13724.973812255925 0.9357273519518412 0.9435607032783938 1.1316600375382433 0.9678543826142301 1.0318327839624941 1.1387977742799544 1.2697353289150728 1.1933120052991817 1.0431216861415997 1.0018924411213757 1.0 13.74451577606848 -5.709070937749413 12.506633826350102 1.0596163540353996 0.9394430986704344 0.24261440570209614 0.09038571637116537 1.2760334742987236 301.01133377389954 0.013829709132699585 0.05355383699145116 1.9540202596388515e-06 5.709070937749413 -0.12017325536496515 GPPDFS(ph)SDEEREPT(ph)PVLGSGAAAAGR ddPTM_A549_MK2206_60min_R1 2 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;P42167;G5E972;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 GPPDFS(0.985)S(0.015)DEEREPT(0.999)PVLGS(0.001)GAAAAGR;GPPDFS(0.904)S(0.098)DEEREPT(0.933)PVLGS(0.065)GAAAAGR 137.71 1.3605000000000001e-24 98876000.0 5205.5 6340.700000000001 5452.1 5244.7 7348.6 5952.5 5876.200000000001 5925.8 9208.9 7634.4 6502.1 True False 6084.0611377439545 6663.414546680574 6225.289762613282 6529.651735443527 6267.630674631553 6582.389599050284 6943.829477235184 6765.800297001391 7123.098853591484 5909.783737678922 4887.44912116918 1.2448336518516063 1.3633726677213052 1.2737298349868167 1.336004032688835 1.282393027373798 1.3467945007426776 1.4207471638239937 1.3843213769114122 1.4574267019453881 1.2091755005861171 1.0 12.254865968561571 -10.863553425765035 1.0872031316102604 0.9981131898823163 1.352724748236892 0.5029530107169335 0.08402189517829725 0.18034460964617788 0.37516629942052465 0.04884035163404071 0.011597610485388434 1.369135950527014e-11 10.863553425765035 0.3546115583545757 GPPDFS(ph)SDEEREPT(ph)PVLGSGAAAAGR ddPTM_A549_PD325901_60min_R1 2 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;P42167;G5E972;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 GPPDFS(0.994)S(0.289)DEEREPT(0.717)PVLGSGAAAAGR;GPPDFS(0.992)S(0.022)DEEREPT(0.986)PVLGSGAAAAGR 167.61 4.0707999999999997e-48 612010000.0 44441.0 49754.0 45113.0 50373.0 54118.0 48056.0 47045.0 46078.0 52082.0 50377.0 53256.0 True False 48952.61760426495 53946.94419167818 48174.6394665069 53484.42580461655 50316.9383769646 47664.64786891604 48835.32321901178 45158.93814250829 49893.17466003373 47196.18762260737 46705.84961759905 1.0481046379642198 1.1550361385857466 1.031447663642423 1.1451333450203054 1.0773155565936834 1.0205284404237818 1.0455932954618672 0.9668797059093027 1.0682425235496342 1.0104984281203089 1.0 15.511315629394442 -7.150130098961055 4.393897166150425 1.0279502077006364 1.0963047283206675 0.4225295603418012 0.04183294019035532 0.19068361710937665 6.11303698646594 0.006108305139023014 0.010792513410265311 7.077337411257576e-08 7.150130098961055 0.06835452062003111 GPPDFS(ph)SDEEREPTPVLGSGAAAAGR ddPTM_A549_MK2206_60min_R1 2 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;P42167;G5E972;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GPPDFS(0.99)S(0.01)DEEREPTPVLGSGAAAAGR;GPPDFS(0.988)S(0.012)DEEREPTPVLGSGAAAAGR 340.26 2.7544999999999983e-233 1297240000.0 27917.0 27407.0 27507.0 24206.1 35673.0 29304.0 27947.3 29068.0 40976.0 40844.0 41519.0 True False 32628.707094880003 28801.89923523815 31407.906219659137 30136.59558665313 30425.54895573736 32404.929829579105 33024.96265428932 33188.47801701649 31695.001425226106 31617.312032610025 31208.68643389416 1.0455008147809652 0.9228808555030332 1.0063834723126512 0.9656476779465897 0.9749064261382602 1.0383304628414531 1.0581977785012635 1.0634371967982663 1.015582680557929 1.0130933289865118 1.0 14.929660015397157 -7.246674890301187 23.981886971513358 1.018375407172073 0.9800483157048371 0.2922354538456514 0.034201877278583155 570.8385433790874 927209.1389373736 0.005093616836586962 0.00879719325281241 5.66663330359896e-08 7.246674890301187 -0.038327091467235896 GPPDFS(ph)SDEEREPTPVLGSGAAAAGR ddPTM_A549_PD325901_60min_R1 4 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;P42167;G5E972;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GPPDFS(0.996)S(0.004)DEEREPTPVLGSGAAAAGR;GPPDFS(0.99)S(0.01)DEEREPTPVLGSGAAAAGR;GPPDFS(0.527)S(0.473)DEEREPTPVLGSGAAAAGR;GPPDFS(0.846)S(0.154)DEEREPTPVLGSGAAAAGR 265.38 3.102499999999999e-138 1716069700.0 23615.800000000003 24631.2 23547.800000000003 25835.6 27238.7 26513.1 24751.8 26986.1 26953.5 27407.3 29368.8 True False 26013.25863096689 26706.957667203922 25145.89531242458 27431.40633509522 25325.547680413656 26297.186103990272 25693.743293704676 26447.8410653141 25820.738128321107 25676.798400640906 25756.623784162202 1.0099638387762022 1.0368966791224432 0.9762884888619152 1.065023372821202 0.9832634856431138 1.020987312792155 0.9975586672001556 1.0268364862935542 1.002489237125804 0.9969007823311694 1.0 14.652655874823747 -8.555719253572333 0.431202674173518 0.9990595355301409 1.0175117654603734 0.06213403686409813 0.023515557027782606 1.8459161510597613 0.8572787099242283 0.009594124565275133 0.010713801105238837 2.781510773592029e-09 8.555719253572333 0.018452229930232433 GPPDFSSDEEREPT(ph)PVLGSGAAAAGR ddPTM_A549_MK2206_60min_R1 4 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;P42167;G5E972;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GPPDFSSDEEREPT(1)PVLGSGAAAAGR;GPPDFSSDEEREPT(1)PVLGSGAAAAGR;GPPDFS(0.007)S(0.006)DEEREPT(0.984)PVLGS(0.003)GAAAAGR;GPPDFSSDEEREPT(0.991)PVLGS(0.008)GAAAAGR 331.94 2.0638999999999987e-232 2047611800.0 13830.1 16298.399999999998 14841.2 13999.9 18794.9 14711.399999999998 13619.1 14713.600000000002 21966.4 22370.0 22738.100000000002 True False 16164.282766518601 17127.91894390505 16945.9053254519 17429.8761284794 16030.195107453477 16268.150583363027 16093.51418151418 16799.297858510192 16991.04547313274 17316.601463360268 17091.602230365104 0.9457441466664244 1.0021248279155142 0.9914755268143112 1.0197918190205315 0.9378989103183129 0.9518212724644899 0.9416035995105414 0.9828977782237641 0.9941165985565874 1.0131643148467044 1.0 14.061000026502239 -8.647139662214263 3.8105764859238556 0.9972723748951424 0.9715730159187618 0.22893358277531262 0.02529291739680212 0.30758782288579833 8.464712922913447 0.004439635501116116 0.005018458852913206 2.2535144011407852e-09 8.647139662214263 -0.02569935897638065 GPPDFSSDEEREPT(ph)PVLGSGAAAAGR ddPTM_A549_PD325901_60min_R1 4 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;P42167;G5E972;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GPPDFSSDEEREPT(1)PVLGSGAAAAGR;GPPDFSSDEEREPT(1)PVLGSGAAAAGR;GPPDFSSDEEREPT(0.984)PVLGS(0.016)GAAAAGR;GPPDFSSDEEREPT(0.992)PVLGS(0.007)GAAAAGR 307.47 1.7927999999999992e-189 2290452000.0 23855.8 26079.6 25418.500000000004 26497.699999999997 27413.399999999998 25705.600000000002 25983.600000000002 24904.8 25146.0 28010.5 29921.4 True False 26277.623254288246 28277.41941836415 27143.552263857524 28134.40274835702 25487.97735509594 25496.262116264515 26972.4201167715 24408.054226562355 24089.201067570535 26241.912249698176 26241.257487382252 1.0013858240948812 1.0775939160675114 1.0343845860629632 1.0721438468368012 0.9712940535472236 0.971609768644816 1.0278630942035005 0.9301404187013002 0.9179895848799737 1.000024951636416 1.0 14.679549235455976 -6.8077312330114195 8.053899668719293 0.9644388358875998 1.0476914113616358 0.47790823445550923 0.03541172994289243 0.1552493847872182 23.819658517180855 0.005762684820012846 0.010969833963865914 1.556928852742445e-07 6.8077312330114195 0.08325257547403597 GPPEDRDAEPQPGS(ph)PAAESLEEPDAAAGLSSTK ddPTM_A549_MK2206_60min_R1 1 GPPEDRDAEPQPGSPAAESLEEPDAAAGLSSTK 33 1 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 GPPEDRDAEPQPGS(1)PAAESLEEPDAAAGLSSTK 173.96 3.4742999999999997e-63 29965000.0 982.9 1460.7 1311.2 972.88 1646.3 1145.3 1157.8 1231.4 2198.9 1735.8 2067.3 True False 1148.7894904021766 1535.043390845857 1497.1478763666362 1211.2356436742434 1404.131450840422 1266.4948858113892 1368.1572731940519 1405.95472100434 1700.8526609217513 1343.681574434543 1553.9323554225625 0.7392789566375848 0.9878444100151521 0.963457560518788 0.779464845717091 0.9035988252259508 0.8150257515340749 0.8804484110391069 0.9047721518238271 1.0945474267180932 0.8646975975148895 1.0 10.601707987493619 -8.654911378269256 5.392778388364702 1.0444097155522292 0.8729818462062633 0.1779327554507948 0.09014600261140514 0.11864017173126011 5.268507113542659 0.012417605056600427 0.014059067404799152 2.2135463577473436e-09 8.654911378269256 -0.17142786934596588 GPPEDRDAEPQPGS(ph)PAAESLEEPDAAAGLSSTK ddPTM_A549_PD325901_60min_R1 2 GPPEDRDAEPQPGSPAAESLEEPDAAAGLSSTK 33 1 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 GPPEDRDAEPQPGS(1)PAAESLEEPDAAAGLSSTK;GPPEDRDAEPQPGS(1)PAAESLEEPDAAAGLSSTK 242.04 1.2494999999999997e-131 101282000.0 4413.3 4976.0 4401.9 5699.5 6026.0 5457.3 4866.799999999999 6153.6 6854.4 5336.0 6562.0 True False 4861.334967100258 5395.344983273521 4700.639404775046 6051.545170496341 5602.75454857143 5412.857558162045 5052.008737215148 6030.861620594184 6566.333404818079 4999.084049352543 5754.915599945268 0.8447274130564993 0.9375193935641444 0.8168042299038673 1.0515436873746495 0.973559811828468 0.9405624572866932 0.8778597443311238 1.047949620781848 1.140995604675858 0.8686633126991622 1.0 12.490579054994695 -8.34927782542834 5.980689912865646 1.0677334328259505 0.9251059540462909 0.11180204772372704 0.08990275496476646 0.16459725801688824 9.094483062786153 0.012543847499754892 0.015195761916308146 4.4742698609445e-09 8.34927782542834 -0.14262747877965953 GPPGS(ph)ADKAGK ddPTM_A549_MK2206_60min_R1 1 GPPGSADKAGK 11 1 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 1 GPPGS(1)ADKAGK 48.625 0.0083439 5409400.0 1787.8 1925.1 2219.0 1373.5 2095.9 1721.0 1421.2 1211.0 2324.5 2789.6 2959.1 True False 2089.536932486531 2023.0793672330774 2533.6875668529324 1710.0075616587576 1787.5958864219406 1903.1150776926586 1679.4136436892265 1382.66295853196 1798.0044614637368 2159.4274225386584 2224.273802994682 0.9394243324150354 0.9095460120553848 1.1391077678663784 0.7687936437305809 0.8036761859152349 0.8556118743701308 0.7550390790145192 0.6216244406018686 0.8083557244809378 0.970846044057743 1.0 11.119118676099829 -6.279997262342364 24.88092710033356 0.8571534009952821 0.9873780708013594 0.2796240803978265 0.11428137489101962 1041.1002214762075 1395822.2708533618 0.01881883297334532 0.04380771706140351 5.248107684835619e-07 6.279997262342364 0.13022466980607728 GPPNS(ph)PDLK ddPTM_A549_MK2206_60min_R1 2 GPPNSPDLK 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 GPPNS(1)PDLK;GPPNS(1)PDLK 96.604 0.00088658 30977000.0 13201.099999999999 14093.1 12071.2 11255.0 15797.4 13310.5 11665.1 12930.900000000001 17997.1 16920.6 18722.8 True False 15429.12294409215 14810.378593502926 13783.077673274058 14012.475505256145 13473.623386689242 14719.008275205184 13784.497674499871 14763.894674220404 13920.785585463127 13098.224708132926 14073.412037007489 1.0963313589852752 1.0523658764880548 0.9793700089949782 0.9956700953833296 0.9573814332486649 1.045873469525374 0.9794709085651804 1.0490629163274137 0.9891549788251055 0.9307071145000084 1.0 13.780684525614943 -5.5530519949352035 3.5683466691757215 0.9976036565065586 1.0907653642327815 0.49396157119632855 0.032962286139244144 0.10440554250330543 2.6862199498326795 0.0032620907308729564 0.017779630426183468 2.798646237916855e-06 5.5530519949352035 0.0931617077262229 GPPNS(ph)PDLK ddPTM_A549_PD325901_60min_R1 2 GPPNSPDLK 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 GPPNS(1)PDLK;GPPNS(1)PDLK 85.554 0.0010428 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GPPPEADLPRS(ph)PGNLTER ddPTM_A549_MK2206_60min_R1 2 GPPPEADLPRSPGNLTER 18 1 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 GPPPEADLPRS(1)PGNLTER;GPPPEADLPRS(0.993)PGNLT(0.007)ER 98.887 2.246e-07 14176900.0 2872.7 3778.2 2912.5 2804.5 4479.3 3342.7 2705.6000000000004 3033.4 4643.299999999999 4005.5 4210.0 True False 3357.5415292281336 3970.494242003023 3325.5362949342793 3491.60262589879 3820.4009036928323 3696.422295295319 3197.1724981463353 3463.393739397891 3591.5999638264466 3100.654768059435 3164.5408099109914 1.0609885385938729 1.2546825844583438 1.0508748329359723 1.1033520613681067 1.2072528474677147 1.1680754072497765 1.010311666113815 1.0944380077358855 1.1349513814383285 0.9798119077335099 1.0 11.627780457514504 -14.99997701718709 0.23680761570410813 0.26757952794686285 1.1385518921230002 0.3666578836479011 0.0668595499721044 37.94347261767834 0.47988284519195157 12.973975828166656 0.037464267325795754 1.0000529212826825e-15 14.99997701718709 0.8709723641761373 GPPPEADLPRS(ph)PGNLTER ddPTM_A549_PD325901_60min_R1 2 GPPPEADLPRSPGNLTER 18 1 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 GPPPEADLPRS(0.974)PGNLT(0.026)ER;GPPPEADLPRS(0.941)PGNLT(0.059)ER 55.228 0.0029055 13215300.0 4968.5 5026.1 5193.5 5109.799999999999 6773.0 6204.1 4864.9 5866.7 5452.8 5738.5 7010.700000000001 True False 5472.8984623836195 5449.667086099486 5545.962141052546 5425.42074080221 6297.287845581532 6153.5758665628 5050.036431675428 5749.684066162885 5223.637778622786 5376.170130661466 6148.428344488918 0.8901296649718944 0.8863512398228144 0.9020129747504683 0.8824077368755923 1.0242109841332123 1.0008372094111653 0.8213540353287156 0.9351469585421056 0.8495891122005091 0.8743974605283222 1.0 12.586001961880635 -11.06188173911058 1.3866002873323535 0.9997594679411754 0.904955208308072 0.0 0.06749004257244866 0.4841877628408644 1.667846797353629 0.04225173046172933 0.009472361382833113 8.671979866173213e-12 11.06188173911058 -0.09480425963310346 GPPPEADLPRS(ph)PGNLTEREELAGSLAR ddPTM_A549_MK2206_60min_R1 1 GPPPEADLPRSPGNLTEREELAGSLAR 27 2 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 GPPPEADLPRS(0.941)PGNLT(0.032)EREELAGS(0.027)LAR 41.208999999999996 0.026552999999999997 2787600.0 892.25 1075.6 744.23 836.61 1407.3 917.6 1111.4 789.1 1245.7 1552.0 1495.8 True False 1042.8399865818928 1130.3434457409483 849.7730049026396 1041.5794875568506 1200.2880342390376 1014.6998229464161 1313.3269938053809 900.9573415173985 963.5509389741356 1201.4021220891868 1124.3515780201574 0.9275034668588306 1.005329176245158 0.7557894003217247 0.9263823771128084 1.0675379994152674 0.9024755626110968 1.1680750216208933 0.8013128269930228 0.8569836675738282 1.0685288708401208 1.0 10.13487751288604 -4.890840452845201 18.102216030250638 0.9372851176354505 0.0019548680962279187 0.0 0.1187916139953868 3923.9497493261333 770864.5696008536 0.014725532647772424 27949.740212963006 1.2857589236036346e-05 4.890840452845201 -0.9353302495392226 GPPPEADLPRS(ph)PGNLTEREELAGSLAR ddPTM_A549_PD325901_60min_R1 3 GPPPEADLPRSPGNLTEREELAGSLAR 27 2 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 GPPPEADLPRS(0.946)PGNLT(0.042)EREELAGS(0.011)LAR;GPPPEADLPRS(1)PGNLTEREELAGSLAR;GPPPEADLPRS(0.912)PGNLT(0.04)EREELAGS(0.047)LAR 144.26 2.9446e-33 97195900.0 6669.6 6780.4 5933.1 5962.1 7150.8 7265.599999999999 6823.5 6498.6 7230.000000000001 7854.5 8336.9 True False 7346.692882099984 7351.808103815872 6335.755844628641 6330.365376088467 6648.5524769207805 7206.431362502 7083.172026462474 6368.980324946925 6926.148243002267 7358.565529542647 7311.51415196338 1.0048114151741274 1.0055110269931806 0.8665449745354434 0.8658077170497657 0.9093263500195 0.9856277663863701 0.9687695160325185 0.8710891058368049 0.9472932827658372 1.006435244000264 1.0 12.835954491567799 -10.127581081814968 0.8270048244169986 0.9968315837750235 0.9341183781776484 0.20038138382914616 0.05065757652488513 0.7701763655934637 1.0424940052981362 0.025367029994965727 0.010627177176348111 7.454506850483867e-11 10.127581081814968 -0.06271320559737503 GPPPEADLPRSPGNLT(ph)EREELAGSLAR ddPTM_A549_MK2206_60min_R1 1 GPPPEADLPRSPGNLTEREELAGSLAR 27 2 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 GPPPEADLPRS(0.453)PGNLT(0.538)EREELAGS(0.009)LAR 64.152 0.0001747 19487000.0 1153.2 734.7 841.32 667.04 926.09 1176.8 517.29 877.92 1288.4 1232.6 823.93 True False 1347.8319669669245 772.0930918425755 960.6318268340289 830.464829944563 789.8633877840048 1301.328194903381 611.2748970897838 1002.3678485172403 996.5794571520238 954.154803922121 619.3254416888269 2.176290325311918 1.2466678096368355 1.5510937580967123 1.3409183186144977 1.2753607951744097 2.101202546039145 0.9870011078874942 1.6184832416764638 1.6091369578399202 1.5406355684666437 1.0 9.274553902493148 -10.79190150984822 0.8211524859852237 0.9656049236504239 1.5306360748296821 0.0 0.3705356165716408 0.7687285297521362 0.82675824598597 0.2862443743202881 0.05661709137886809 1.614724705732965e-11 10.79190150984822 0.5650311511792582 GPPPEADLPRSPGNLT(ph)EREELAGSLAR ddPTM_A549_PD325901_60min_R1 1 GPPPEADLPRSPGNLTEREELAGSLAR 27 2 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 GPPPEADLPRS(0.369)PGNLT(0.63)EREELAGSLAR 94.26100000000001 1.7455e-09 68548000.0 984.48 1285.3 1320.8 1168.0 1201.4 999.46 1305.0 1245.2 1389.4 1425.3 1303.8 True False 1084.4236848641285 1393.6167417607421 1410.4374306156167 1240.1447072795377 1117.017808604998 991.3207291299071 1354.6624891234005 1220.3635091594972 1331.0083497686517 1335.3063147567796 1143.4408654691613 0.9483863290290769 1.2187921420745549 1.2335027312819582 1.0845726654790304 0.9768916280132058 0.8669628304067668 1.184724571276866 1.067272953078141 1.1640377652783385 1.1677965648087054 1.0 10.159166041491352 -11.135757630466582 1.5185729230958076 1.0002402765268779 1.0954932904958983 0.0 0.12150545965761601 0.8670377543426295 3.596415882481183 0.08190805315915303 0.01778177995833117 7.315472288831825e-12 11.135757630466582 0.09525301396902042 GPPQEEEEEEDEEEEAT(ph)KEDAEAPGIR ddPTM_A549_MK2206_60min_R1 2 GPPQEEEEEEDEEEEATKEDAEAPGIR 27 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GPPQEEEEEEDEEEEAT(1)KEDAEAPGIR;GPPQEEEEEEDEEEEAT(1)KEDAEAPGIR 190.97 2.2863e-58 14462900.0 2088.02 2378.5 2741.3999999999996 2048.7 5005.7 0.0 0.0 3978.4 5848.4 3898.0 4538.4 True False 2440.426728812242 2499.5554906051007 3130.171742122862 2550.6315919696362 4269.368161010691 0.0 0.0 4542.350383339013 4523.746737975705 3017.439092721424 3411.390026532077 0.7153760519412408 0.7327087993940342 0.9175648981142465 0.7476810250754401 1.2515039698790498 0.0 0.0 1.3315247884325436 1.326071396935641 0.8845189407406656 1.0 11.736143993344301 -8.316070124745401 24.99800397069776 1.1715965538134991 0.6439966275120909 0.31126390900948253 0.36411574193288015 280.37104558433583 128291.87443994365 0.06161322931228948 0.07448678445898639 4.82980809704506e-09 8.316070124745401 -0.5275999263014083 GPPQEEEEEEDEEEEAT(ph)KEDAEAPGIR ddPTM_A549_PD325901_60min_R1 1 GPPQEEEEEEDEEEEATKEDAEAPGIR 27 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GPPQEEEEEEDEEEEAT(1)KEDAEAPGIR 169.93 1.1413999999999998e-48 9341800.0 1139.7 1722.3 1402.9 1172.5 1498.6 612.66 1439.1 956.63 1447.9 1292.8 970.32 True False 1255.4015049972036 1867.4442654123766 1498.1092303230218 1244.9226620592963 1393.3435058893374 607.6707000867758 1493.8657380057355 937.5492641882835 1387.0497982078805 1211.1723873693713 850.9767913652684 1.4752476421631837 2.1944714407737655 1.7604583879655797 1.462933742366815 1.6373460710413978 0.7140861022917636 1.7554717745110833 1.1017330598219044 1.6299502081397086 1.4232731135078567 1.0 9.732975975694401 -2.0000000000072586 0.04309351096164429 8.260488895028606e-11 4.144637133193526 0.19304122266534018 0.3504843322249885 517.8130155230506 1.6485151252278758 40.94554729043502 150.057416363904 0.009999999999832863 2.0000000000072586 4.144637133110921 GPPQEEEEEEDEEEEAT(ph)KEDAEAPGIRDHESL ddPTM_A549_MK2206_60min_R1 1 GPPQEEEEEEDEEEEATKEDAEAPGIRDHESL 32 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GPPQEEEEEEDEEEEAT(0.624)KEDAEAPGIRDHES(0.376)L 51.398 0.00253 39920000.0 277.68 395.5 195.79 188.17 230.15 141.88 117.75 406.38 248.4 309.81 288.36 True False 324.54559537580275 415.62926068291637 223.5559660721657 234.27165844727236 196.2952398778615 156.89364742767822 139.14365081931223 463.9856094865544 192.13779661328982 239.82370582761027 216.75225366886772 1.497311284576588 1.917531438071564 1.0313893502288192 1.0808268633052787 0.9056202948539654 0.7238385980861105 0.641947885035059 2.1406264600846314 0.8864396718422066 1.1064415791218891 1.0 7.759903183637043 -5.774403177646453 23.802322217554593 1.0003585929083716 1.7074211727954671 0.288300016590587 0.3854241588301356 89.50751878143167 164343.5376715736 0.05071426024181652 0.1592947523217295 1.6811126740644722e-06 5.774403177646453 0.7070625798870955 GPPQEEEEEEDEEEEATKEDAEAPGIRDHES(ph)L ddPTM_A549_MK2206_60min_R1 1 GPPQEEEEEEDEEEEATKEDAEAPGIRDHESL 32 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GPPQEEEEEEDEEEEAT(0.024)KEDAEAPGIRDHES(0.976)L 93.56299999999999 7.3561e-10 42059000.0 409.45 274.84 243.42 312.3 409.11 320.97 478.91 300.26 382.48 484.84 648.82 True False 478.5551499086082 288.8281820634458 277.94061627910804 388.81351401967976 348.93046094474 354.93483235735755 565.9217478885504 342.82277450768476 295.8488906950529 375.3143072639959 487.7000874789667 0.9812488498461611 0.5922249953992519 0.5699006898191196 0.7972389671479162 0.7154611407769914 0.7277727469603232 1.1603888586814273 0.7029376932856709 0.6066205405546746 0.7695596472087618 1.0 8.929850420925336 -7.564314307668179 24.999511365313833 0.8282662061846594 0.7185396207293017 0.09765857480939044 0.1709190583155343 338.75123458516185 204379.1803138902 0.03031161796360481 0.044959419141230215 2.727003481101138e-08 7.564314307668179 -0.10972658545535774 GPPQEEEEEEDEEEEATKEDAEAPGIRDHES(ph)L ddPTM_A549_PD325901_60min_R1 2 GPPQEEEEEEDEEEEATKEDAEAPGIRDHESL 32 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 GPPQEEEEEEDEEEEAT(0.035)KEDAEAPGIRDHES(0.965)L;GPPQEEEEEEDEEEEAT(0.154)KEDAEAPGIRDHES(0.846)L 75.163 3.7476999999999997e-06 116572000.0 224.83 140.8 479.45000000000005 450.71 507.2 544.15 609.11 382.37 488.86 554.13 465.72 True False 247.65457608890185 152.66571013764295 511.9883601670634 478.54933306332214 471.5760217450098 539.7186228123572 632.2900143677816 374.7433303865381 468.3149142564437 519.1421372315823 408.43939244232075 0.6063435130681605 0.3737781246435533 1.2535234593939557 1.171653229140728 1.154580166533778 1.3214166723367056 1.5480632526331866 0.917500459849643 1.1465958546654593 1.2710383641678118 1.0 8.673978205208154 -5.761093896490366 24.999999868497397 1.1308691953654524 0.49006066726224 0.6981185925105646 0.1750896363298204 3.805899592878158 275281.9496333582 0.02472650229480891 0.08530442178855543 1.7334291817719688e-06 5.761093896490366 -0.6408085281032123 GPPQS(ph)PVFEGVYNNSR ddPTM_A549_MK2206_60min_R1 2 GPPQSPVFEGVYNNSR 16 0 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR 243.61 1.4023999999999998e-65 245240000.0 55209.0 55328.0 50430.0 47718.0 66263.0 47986.0 48599.0 47215.0 70590.0 69384.0 69964.0 True False 64526.92946954294 58143.9588750048 57581.73231022683 59408.91214214243 56515.80047806528 53063.84666947115 57428.80922435459 53907.870839873205 54601.477709066494 53710.10621071914 52590.007891832 1.2269807907666224 1.1056084835468414 1.094917734727515 1.129661593973054 1.0746490206715298 1.0090100533662925 1.0920098993420027 1.0250591890146092 1.038248136820434 1.021298690830984 1.0 15.682501092863703 -2.0000000000000053 0.24169951072411147 1.0070227865799117 2.1391065213462266 0.7711138799054277 0.030399367068290703 14.448480040900058 0.173675332470863 0.014648564291839163 6.67994264441709 0.009999999999999877 2.0000000000000053 1.1320837347663149 GPPQS(ph)PVFEGVYNNSR ddPTM_A549_PD325901_60min_R1 2 GPPQSPVFEGVYNNSR 16 0 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR 269.72 1.4856999999999998e-91 425070000.0 43903.0 44402.0 46435.0 45674.0 54888.0 50553.0 51566.0 53637.0 60557.0 63451.0 64715.0 True False 48360.00024031961 48143.91236883253 49586.35833633869 48495.179246819855 51032.856233320446 50141.31312879374 53528.37234799793 52567.16795758747 58011.999882640135 59444.69303138458 56755.465262185 0.8520765360114295 0.8482691868779345 0.8736842893855558 0.8544583155612188 0.8991707846560918 0.8834622867976359 0.9431404024391425 0.9262045111382762 1.0221394470937821 1.0473827103130342 1.0 15.792471702825438 -8.101745346697381 0.9258757365970486 1.0115486445147823 0.8603484564156728 0.8922718899475893 0.02246232413294002 0.10227760752361531 0.17423141024653738 0.004108120511563284 0.005944466654186714 7.911423869823366e-09 8.101745346697381 -0.1512001880991095 GPPS(ph)PGPAAQPPAPPR ddPTM_A549_MK2206_60min_R1 2 GPPSPGPAAQPPAPPR 16 0 H9KV50;Q9NZV5-2;Q9NZV5 H9KV50 SEPN1 Selenoprotein N 1 GPPS(1)PGPAAQPPAPPR;GPPS(1)PGPAAQPPAPPR 113.4 2.2445999999999999e-07 8019900.0 3846.2 4253.4 3674.4 3176.5 4996.4 3323.3 3383.5 3587.6 5307.3 4902.9 4844.2 True False 4495.344529438244 4469.8798922597125 4195.48517153872 3954.7426425985054 4261.436178691059 3674.9694001719963 3998.2381532666077 4096.1532865642075 4105.20502401656 3795.3314847880665 3641.251446881432 1.234560313951486 1.227566938857783 1.1522096819575491 1.0860943552760038 1.1703218634738304 1.0092599903583814 1.0980395645818195 1.1249300814071432 1.1274159678075744 1.0423151326279863 1.0 11.830218654294653 -2.0000000000000004 0.06925896176350652 0.885354877218469 1.7030458935380053 0.5864227088501912 0.04846408002657946 120.70357113620165 0.6005994031228463 1.232813190171871 9.626682598657007 0.00999999999999999 2.0000000000000004 0.8176910163195363 GPPS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 GPPSPGR 7 0 Q12852;Q12852-2 Q12852 MAP3K12 Mitogen-activated protein kinase kinase kinase 12 1 GPPS(1)PGR 82.279 0.015034 11948000.0 1786.9 2129.0 1765.3 1378.5 2128.7 1551.0 1508.7 1430.6 2757.1 2938.6 2515.6 True False 2088.4850344894185 2237.3570063057637 2015.6460846171608 1716.2325618832172 1815.5710498718395 1715.1257905295238 1782.8112610708824 1633.3919310287547 2132.621252183985 2274.768219053665 1890.9070929719924 1.1044884448589631 1.183218897756233 1.0659678056678674 0.9076239484541601 0.9601587812642105 0.9070386360621303 0.9428338746504924 0.8638139531548883 1.1278297384944933 1.2030036946333238 1.0 10.884862764924186 -5.976666313134719 7.230807155116837 1.0119488969828998 1.1401616463346997 0.25637158390312076 0.09747082457957008 0.20199876282149196 42.0546019225516 0.013582723063214085 0.04191692006226924 1.0551973378599807e-06 5.976666313134719 0.12821274935179994 GPPS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 GPPSPGR 7 0 Q12852;Q12852-2 Q12852 MAP3K12 Mitogen-activated protein kinase kinase kinase 12 1 GPPS(1)PGR;GPPS(1)PGR 67.494 0.023479 26186000.0 4844.799999999999 5044.8 5051.799999999999 4770.3 5644.0 5420.5 4871.3 4944.6 6311.700000000001 5357.799999999999 6159.2 True False 5336.640529446744 5469.9430007271385 5394.645526941222 5064.950596862653 5247.584910742977 5376.357245161047 5056.679987177645 4845.97607403634 6046.441198527995 5019.507593632129 5401.657446385689 0.9879635246062395 1.0126415928850026 0.998701894832454 0.937666012170333 0.9714768037084981 0.9953162151662227 0.9361348877391564 0.8971276172425259 1.1193677604591048 0.9292532233769728 1.0 12.399186436898734 -8.764877288781095 24.99998839232065 1.056368105356388 0.9687674367792765 0.011363787151093208 0.05589817522197223 69.74306808891451 507159.79405477707 0.009064346050918081 0.009841566716716592 1.7183938559483994e-09 8.764877288781095 -0.08760066857711157 GPPS(ph)PPAPVMHS(ph)PSR ddPTM_A549_MK2206_60min_R1 5 GPPSPPAPVMHSPSR 15 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.959)PS(0.041)R;GPPS(1)PPAPVMHS(0.852)PS(0.148)R;GPPS(0.999)PPAPVMHS(0.889)PS(0.112)R;GPPS(1)PPAPVMHS(0.959)PS(0.041)R;GPPS(1)PPAPVMHS(0.928)PS(0.072)R 101.67 2.4313999999999997e-06 217821100.0 9635.6 9738.5 9564.0 9606.2 13174.699999999999 10594.6 9537.7 10734.4 15985.0 15394.7 16079.0 True False 11261.853712197792 10234.148053503366 10920.319012790196 11959.719431238707 11236.719082419553 11715.713539873701 11270.576632011505 12256.034072721272 12364.423022799672 11917.026577916498 12086.140542175495 0.9317990034038333 0.8467672552532827 0.9035406277697104 0.9895399933092263 0.9297193792516459 0.9693510925998948 0.9325207325433609 1.014056888545431 1.0230249250911065 0.9860076123003153 1.0 13.561066002996274 -6.924338251771238 0.5166674776709378 1.0122190516684655 0.8785216281171851 0.5551792421569197 0.03395090603773473 0.5751934092767972 0.2510788394214378 0.0076405697278058285 0.03478827925865163 1.1903145662541083e-07 6.924338251771238 -0.13369742355128034 GPPS(ph)PPAPVMHS(ph)PSR ddPTM_A549_PD325901_60min_R1 6 GPPSPPAPVMHSPSR 15 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.89)PS(0.11)R;GPPS(1)PPAPVMHS(0.749)PS(0.251)R;GPPS(1)PPAPVMHS(0.879)PS(0.121)R;GPPS(0.999)PPAPVMHS(0.599)PS(0.402)R;GPPS(1)PPAPVMHS(0.918)PS(0.082)R;GPPS(1)PPAPVMHS(0.654)PS(0.346)R 79.77600000000001 5.3713999999999994e-05 290636000.0 12358.199999999999 13368.600000000002 13243.6 13443.3 16474.2 14381.7 13408.4 15051.6 14384.9 14094.2 15528.1 True False 13612.795366374003 14495.218839105788 14142.390336236345 14273.662109050525 15317.10902490466 14264.58020343744 13918.663999358012 14751.384030248224 13780.352677837245 13204.289806668774 13618.242140736058 0.9996000383672308 1.0643972026129893 1.0384886823191672 1.0481280888929063 1.1247493521272327 1.04746119624118 1.0220602523818625 1.0832076473455128 1.0119039252956348 0.9696031007681208 1.0 13.733252870086353 -8.887261715314448 7.09982371392197 1.0052227272232959 1.0542573685679988 0.3905335437800036 0.03243163172839622 0.1776023365392257 10.47132007698787 0.0051855722394072296 0.0055028951323285715 1.2963977979905207e-09 8.887261715314448 0.04903464134470292 GPPS(ph)PPAPVMHSPS(ph)R ddPTM_A549_MK2206_60min_R1 1 GPPSPPAPVMHSPSR 15 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.173)PS(0.827)R 79.393 0.0020442999999999998 7944500.0 1428.8 1755.1 2188.5 1138.9 1967.6 2076.7 1659.8 1943.1 2618.7 2713.9 2837.1 True False 1669.9465091938455 1844.4270933617863 2498.86220822787 1417.9305511271637 1678.16864646396 2296.4550155981055 1961.3641752008018 2218.540375494178 2025.5686312045993 2100.8281051145927 2132.569770023391 0.7830677020126422 0.8648847598273682 1.1717610571777266 0.6648929245168899 0.7869232088221682 1.076848714578242 0.9197186430994418 1.0403131502093101 0.9498252576197692 0.9851157672049107 1.0 11.058377226777829 -7.255883428906922 24.96912143352179 0.9826568322831823 0.8620070971430274 0.24386188136629328 0.12218508534837909 592.5260541209527 2662882.143324409 0.01741476749542779 0.029616248103290225 5.547746027228883e-08 7.255883428906922 -0.12064973514015498 GPPS(ph)PPAPVMHSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 GPPSPPAPVMHSPSR 15 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.199)PS(0.801)R 55.18899999999999 0.016730000000000002 11554000.0 3943.5 4620.4 4070.4 4060.7 5615.4 5485.5 4314.2 5128.9 5242.2 6770.0 6798.1 True False 4343.8412169487365 5009.777323295207 4346.641821303607 4311.520216481181 5220.993676078334 5440.82790671173 4478.379241820826 5026.600065955789 5021.888564241559 6342.541044624569 5961.9767967064745 0.7285907619345934 0.8402879605406577 0.7290605061906289 0.7231695733641497 0.8757151954973263 0.9125879036827788 0.7511567714075607 0.8431096324850832 0.8423193741739752 1.0638318901422639 1.0 12.541575045207264 -14.999999999996376 0.13530219487106454 1.6992958318249196 0.7267920864863155 0.6995287968946664 0.05914858788164674 31.229946056075885 0.28631187066281233 5.82922226181987 0.14838138746452975 1.000000000008344e-15 14.999999999996376 -0.9725037453386041 GPPS(ph)PPAPVMHSPS(ph)RK ddPTM_A549_MK2206_60min_R1 1 GPPSPPAPVMHSPSRK 16 1 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.299)PS(0.701)RK 54.559 0.0048741999999999995 20474000.0 1693.0 1789.4 1718.0 1676.6 2058.7 1818.2 1796.9 1837.0 2739.3 2705.3 2733.0 True False 1978.7370101240058 1880.4728168546424 1961.638233372391 2087.3670752654343 1755.8679571433981 2010.6007171765202 2123.3734705496568 2097.400375576557 2118.8529237632238 2094.17085108755 2054.3206730372303 0.9632074661442815 0.9153745282008183 0.95488414205178 1.0160862920097797 0.8547195090761649 0.9787180470729179 1.033613446244658 1.0209702911063223 1.0314129393589684 1.0193982266611779 1.0 11.004445684083953 -7.523393566725967 17.56208486883937 1.0165761070983657 0.9416299784801587 0.512006698724935 0.0372219692113671 0.26331810233705194 8905.797635950406 0.005425021855919244 0.008134088928943005 2.996445846440105e-08 7.523393566725967 -0.07494612861820693 GPPS(ph)PPAPVMHSPSR ddPTM_A549_PD325901_60min_R1 4 GPPSPPAPVMHSPSR 15 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 1 GPPS(1)PPAPVMHSPSR;GPPS(0.999)PPAPVMHS(0.001)PSR;GPPS(1)PPAPVMHSPSR;GPPS(1)PPAPVMHSPSR 74.732 0.00021872 50104800.0 8579.7 8942.3 8606.6 9707.2 10386.4 9958.6 7982.3 9923.0 10809.6 10562.0 13075.9 True False 9450.704827958683 9695.89900400458 9190.695631690156 10306.791697349252 9656.895095134803 9877.500463363307 8286.070794582161 9725.07798055709 10355.310103396585 9895.1135174778 11467.647194959502 0.8241189031445485 0.8455002878241948 0.8014456213590039 0.8987712581426037 0.8420990749854428 0.861336270242502 0.7225606659946975 0.8480447484320635 0.9030021526951201 0.8628721610678 1.0 13.485281805048698 -9.452565915204923 0.8877951897868374 0.9825734183778656 0.8305750057607627 0.2500244090420648 0.05661509485037796 0.21618239623412328 0.36229871719232504 0.013768603927268731 0.009762592188977936 3.527232478552075e-10 9.452565915204923 -0.1519984126171029 GPPS(ph)PRPAGPTPR ddPTM_A549_MK2206_60min_R1 2 GPPSPRPAGPTPR 13 1 Q14681 Q14681 KCTD2 BTB/POZ domain-containing protein KCTD2 1 GPPS(1)PRPAGPTPR;GPPS(1)PRPAGPTPR 68.173 0.0011116 87131000.0 3725.2 3343.6000000000004 2730.1 2501.0 3428.6000000000004 2874.3 2620.1 2623.3999999999996 3933.8 4167.5 4533.9 True False 4353.922687604219 3513.7749583297104 3117.2692322060325 3113.7451122741572 2924.257481838958 3178.4565181940757 3096.1382548762613 2995.274983825551 3042.8005809877604 3226.0588555455474 3408.0075007257565 1.2775566622658618 1.0310349838084072 0.9146896629605981 0.9136555924865382 0.8580548843323318 0.932643639286945 0.9084892724610845 0.8788933073614681 0.89283858100071 0.9466114305377961 1.0 11.734712795474648 -5.302031984369151 2.3441835234664503 0.9297148004853463 1.3436308217528319 0.8854363513178908 0.037738891264102147 0.1646788018816893 1.1404689659922198 0.007100598742623388 0.13324287831568202 4.988477476009587e-06 5.302031984369151 0.4139160212674856 GPPS(ph)PRPAGPTPR ddPTM_A549_PD325901_60min_R1 2 GPPSPRPAGPTPR 13 1 Q14681 Q14681 KCTD2 BTB/POZ domain-containing protein KCTD2 1 GPPS(0.999)PRPAGPT(0.001)PR;GPPS(0.999)PRPAGPT(0.001)PR 77.191 0.00026067 132437000.0 8931.099999999999 8766.599999999999 8855.3 7744.8 10139.7 8350.5 8547.2 8449.3 9193.0 8816.0 11041.8 True False 9837.778697271677 9505.39214838538 9456.27390924475 8223.178706283019 9427.522452066009 8282.496296599453 8872.4683732073 8280.772083152373 8806.650179518641 8259.35625545203 9683.72859973722 1.0159081386831346 0.9815839064968549 0.9765116619957067 0.8491748422716189 0.9735426137739792 0.8553003330580958 0.9162243945424148 0.8551222804175947 0.909427612392774 0.8529107533720182 1.0 13.241346930985719 -6.016459144736335 24.0088357593265 0.9335114919162452 0.9938215054194758 0.22476019270112257 0.0551120107234628 572.7525685812263 835476.2694611584 0.008123406738999936 0.022179571839199937 9.628105829245974e-07 6.016459144736335 0.06031001350323062 GPPT(ph)PRT(ph)TPTMSEEPPLDLTGK ddPTM_A549_PD325901_60min_R1 2 GPPTPRTTPTMSEEPPLDLTGK 22 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 2 GPPT(0.897)PRT(0.396)T(0.364)PT(0.299)MS(0.044)EEPPLDLTGK;GPPT(0.985)PRT(0.354)T(0.315)PT(0.305)MS(0.041)EEPPLDLTGK 90.09700000000001 5.5673e-07 13298100.0 4053.5 3961.2000000000003 3477.3 3877.6 4371.6 5190.3 4708.1 4777.3 3586.9 4749.4 5434.2 True False 4465.008335971016 4295.024225832611 3713.2904887035725 4117.11054533145 4064.553897201276 5148.031917638481 4887.269321871175 4682.013003780653 3436.1550667807496 4449.522073462327 4765.827850232027 0.9368799034051627 0.901212624711886 0.7791491017710153 0.8638815069937967 0.8528536961324339 1.08019678415112 1.0254817159695004 0.9824133709640197 0.7209985703981017 0.933630465323186 1.0 12.21851112454485 -5.303530462788677 5.273939268941932 0.8907774778259187 0.937639106157158 0.0 0.10431256577709423 0.8956059281398128 61.88029468366524 0.017527185827834416 0.1216629484099496 4.971295022665013e-06 5.303530462788677 0.0468616283312393 GPPVT(ph)PSSEK ddPTM_A549_MK2206_60min_R1 1 GPPVTPSSEK 10 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 GPPVT(0.855)PS(0.126)S(0.019)EK 80.979 0.0012194 5336700.0 2952.3 2987.7 3148.4 3056.7 4141.4 3405.9 3017.1 2888.9 4541.6 4297.3 4458.6 True False 3450.57606319498 3139.7611685015145 3594.890462135994 3805.5916372204756 3532.2055460794054 3766.3100773465553 3565.268016025026 3298.4104218852003 3512.934851444918 3326.5369453955336 3351.4065689000363 1.029590409953601 0.936848783921795 1.0726512549970537 1.1355207310671076 1.0539471930553352 1.123799813575795 1.0638124449326902 0.9841868940919842 1.0481971611692271 0.9925793475088088 1.0 11.71055099936206 -10.343568585647928 0.5421551945636947 0.9964128178351568 1.0534999161061869 0.1358098392102295 0.05299914652870885 2.0605701253122 1.0120568011149065 0.0569826127466855 0.013546703887036687 4.533476975119673e-11 10.343568585647928 0.05708709827103009 GPPVT(ph)PSSEKR ddPTM_A549_PD325901_60min_R1 2 GPPVTPSSEKR 11 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 GPPVT(0.992)PS(0.004)S(0.004)EKR;GPPVT(0.991)PS(0.007)S(0.001)EKR 80.96 0.00051134 75510000.0 11351.9 11052.6 10993.2 11886.5 12053.400000000001 11594.599999999999 12592.599999999999 12346.3 11786.2 12360.3 13576.8 True False 12504.336531172903 11984.041391103076 11739.26465948182 12620.70210879985 11206.810765972601 11500.17742177738 13071.818283935125 12100.043361015016 11290.867001614564 11579.868548578008 11906.939670426216 1.0501721581936345 1.0064753599842586 0.9859178751563797 1.0599450789312754 0.9411999284591527 0.9658382204069507 1.0978319069174565 1.0162177432601276 0.9482593608547611 0.9725310507232543 1.0 13.539515037953842 -8.733628926510832 24.495401488553895 0.9755669192061691 1.0142667882245453 0.1578834305878386 0.042919578995879434 255.0045500749263 224607.34779533074 0.007506420523950939 0.008510497341024229 1.8465925262055549e-09 8.733628926510832 0.03869986901837619 GPQASS(ph)PR ddPTM_A549_MK2206_60min_R1 3 GPQASSPR 8 0 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 GPQAS(0.077)S(0.923)PR;GPQAS(0.291)S(0.709)PR;GPQAS(0.156)S(0.844)PR 57.96 0.015606 90302100.0 2469.82 2438.2599999999998 1827.0500000000002 1349.08 1703.0300000000002 1215.68 1278.57 1365.6599999999999 1736.9 2786.25 3038.1 True False 2886.665234698447 2562.3570193494998 2086.1531631449516 1679.6046605625024 1452.5165429901995 1344.3224506969261 1510.8696189218524 1559.2464871583443 1343.4949232593528 2156.834189865335 2283.6559227056023 1.2640543638808857 1.1220416323986764 0.9135146597186778 0.7354893720471518 0.6360487709853 0.5886711904936257 0.6616012525791637 0.6827852093020209 0.5883088209136266 0.9444654811702049 1.0 11.157129581597301 -5.78712022515302 1.9478323245032558 0.7514552586153644 1.2548963763841177 0.6617926044489845 0.1283619423689759 0.23243866410644665 1.6149904180717851 0.024396581348058527 0.14447471356371772 1.6325999349041044e-06 5.78712022515302 0.5034411177687532 GPQASS(ph)PR ddPTM_A549_PD325901_60min_R1 2 GPQASSPR 8 0 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 GPQAS(0.09)S(0.91)PR;GPQAS(0.111)S(0.889)PR 63.816 0.0097137 107285000.0 2634.25 2633.2 2495.01 2261.72 2532.01 2187.82 1772.8799999999999 2219.57 2677.3999999999996 2846.8 3270.2 True False 2901.677120767647 2855.1090052162044 2664.336382313952 2401.421307661196 2354.170352560297 2170.0031192894103 1840.3479185571616 2175.29893513102 2564.8781889093043 2667.0525621620727 2867.9861315057924 1.011747263660639 0.9955100458303726 0.9289920732340092 0.8373197071215844 0.8208443990362937 0.7566295720370458 0.641686477608912 0.7584760997393359 0.8943133164882684 0.9299391419169023 1.0 11.485822332392214 -5.866886628591819 3.1943698004614034 0.8842339008038347 1.006650362438421 0.2003573419319996 0.10135263630868313 0.4212240644332743 8.389378768364411 0.018228390883464028 0.06939087523932261 1.3586680769502052e-06 5.866886628591819 0.12241646163458642 GPQERT(ph)PCGPALR ddPTM_A549_MK2206_60min_R1 1 GPQERTPCGPALR 13 1 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 GPQERT(1)PCGPALR 42.647 0.03218 4448400.0 1065.7 1248.2 1216.5 966.45 1511.2 1237.8 1116.2 1082.6 1745.9 1843.2 1833.2 True False 1245.5641061365338 1311.7280485067408 1389.0179923734079 1203.23029338559 1288.904481874535 1368.7831744148586 1318.9990916731745 1236.0618653234515 1350.4564376293995 1426.8198398420045 1377.9658462538785 0.9039150785360244 0.9519307405715381 1.0080206241319956 0.8731931177080168 0.9353675095638512 0.9933360671717781 0.9572073903420681 0.8970192321411989 0.9800362188226467 1.035453704256125 1.0 10.428324415047696 -8.964447724371592 14.788282721026208 0.9911961804322748 0.9423751075500999 0.33197657570825745 0.04002894722355384 2.297546501093354 955.2112970837178 0.006459711468014705 0.006817072765278484 1.0853061790799733e-09 8.964447724371592 -0.048821072882174854 GPQES(ph)PQK ddPTM_A549_MK2206_60min_R1 1 GPQESPQK 8 0 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 GPQES(1)PQK 82.914 0.0034476999999999997 22770000.0 11144.0 9308.8 7364.1 5446.9 5790.1 3201.1 3130.3 4137.1 5622.4 15549.0 16895.0 True False 13024.83475535849 9782.578158900458 8408.440113141816 6781.39074452063 4938.383960099092 3539.838277281795 3699.034990740491 4723.546594337385 4348.935377127863 12036.470100750497 12699.505221721181 1.0256174967415947 0.7703117553090475 0.662107693672983 0.5339885787772083 0.38886428044869814 0.2787382827503602 0.29127394541432033 0.3719472933684259 0.34244919791752687 0.9477904761331464 1.0 13.632484669611909 -5.413827068266776 1.647336112329328 0.5742626811376145 1.1059245129802222 0.27759756435031047 0.23775663761394855 1.0390017174932704 3.363026154879719 0.04341487935202154 0.7941185406423225 3.856318818688463e-06 5.413827068266776 0.5316618318426077 GPQES(ph)PQK ddPTM_A549_PD325901_60min_R1 1 GPQESPQK 8 0 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 GPQES(1)PQK 82.494 0.0035256999999999997 32032000.0 16167.0 15309.0 12497.0 11661.0 12604.0 9247.4 7583.1 8821.1 10807.0 15169.0 18917.0 True False 17808.261938483636 16599.14315694018 13345.121570565836 12381.273485947506 11718.738521439485 9172.092240365693 7871.6790201315425 8645.156240480921 10352.81937235484 14211.226751242264 16590.328924743142 1.0734122282484735 1.0005312873685037 0.804391620630418 0.7462946359961454 0.7063596252128509 0.5528577692444816 0.4744739574386356 0.5210961325539101 0.62402737277345 0.8565970461289264 1.0 14.018054869423187 -4.165306326589466 13.080992132914487 0.774658080914016 1.1945450976036252 0.0 0.19780801666715206 0.0 0.0 0.0304242647080589 0.0 6.83429425048116e-05 4.165306326589466 0.41988701668960915 GPQES(ph)PQKMSEEVR ddPTM_A549_MK2206_60min_R1 1 GPQESPQKMSEEVR 14 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 GPQES(0.815)PQKMS(0.185)EEVR 55.33 0.004518199999999999 3660200.0 1796.7 1630.1 1344.4 1305.6 2047.1 1772.4 1230.5 1040.8 2377.6 2368.8 2577.7 True False 2099.9390349024225 1713.0651272799555 1535.0561355912953 1625.4720586106114 1745.9743017769713 1959.9541915760997 1454.0659221500107 1188.3365873163193 1839.0773962470128 1833.686434796951 1937.5859490991832 1.0837914240030075 0.8841234258931269 0.7922518927766632 0.8389161055623474 0.9011080528266138 1.0115443872243788 0.7504523465532101 0.6133078059679351 0.9491591312901662 0.9463768229994975 1.0 10.92004459277227 -8.979215139085255 24.98266803726407 0.9775703538751764 0.8552296859504098 0.13710530931054132 0.11863901485180826 179.93439168723722 216277.53037875897 0.021300649707770927 0.021774873242224702 1.049022639225295e-09 8.979215139085255 -0.12234066792476661 GPQES(ph)PQKMSEEVR ddPTM_A549_PD325901_60min_R1 1 GPQESPQKMSEEVR 14 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 GPQES(0.826)PQKMS(0.174)EEVR 42.58 0.01822 27855000.0 4375.8 4090.9 4118.5 4513.1 4640.2 4964.5 5026.2 5427.1 4399.0 4975.0 5703.8 True False 4820.027994706295 4435.6545000148 4398.006176552404 4791.863937006235 4314.28835982097 4924.070757974732 5217.474791442171 5318.852233022412 4214.125327934574 4660.877650961187 5002.2687593672335 0.9635683779845546 0.8867285452643077 0.8792022956217038 0.9579381211841136 0.8624663262528721 0.9843674930008373 1.043021685244709 1.063287977692591 0.8424428055856086 0.9317527456383149 1.0 12.288366856653186 -7.272282384058056 24.480419278322497 0.9487981572492904 0.9096433290924403 0.13899615784619512 0.06494229575674511 1467.927784239665 3314159.222846576 0.01222567048767261 0.019657685064206912 5.3421689150508375e-08 7.272282384058056 -0.03915482815685012 GPQGS(ph)PLLSR ddPTM_A549_MK2206_60min_R1 2 GPQGSPLLSR 10 0 Q8TEP8;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8-1;K7EPA2 Q8TEP8 CEP192 Centrosomal protein of 192 kDa 1 GPQGS(1)PLLSR;GPQGS(0.999)PLLS(0.001)R 95.094 0.00056448 19249300.0 2537.6 2374.8999999999996 2072.84 2324.8 3020.1 2513.5 2497.7 2533.9 3409.5 3739.3999999999996 3679.8 True False 2965.8848416365477 2495.772265981941 2366.799881061483 2894.3761043642394 2575.8472907022788 2779.4769016737323 2951.499759247525 2893.0880847432973 2637.253693852706 2894.6669428739083 2766.0041026865697 1.072263355920491 0.9023024454511266 0.8556747543370067 1.0464106331414997 0.931252158375472 1.0048708528574042 1.0670626830888599 1.0459449723640297 0.9534525604250511 1.046515780675224 1.0 11.43358758103523 -6.282742057653385 24.98592207676731 0.9910339374402036 0.9393023791103782 0.12653241972311902 0.06483523125756127 1258.554211578381 1476156.3288933197 0.008715228545214757 0.02026730565144915 5.215043584159563e-07 6.282742057653385 -0.051731558329825456 GPQGS(ph)PLLSR ddPTM_A549_PD325901_60min_R1 2 GPQGSPLLSR 10 0 Q8TEP8;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8-1;K7EPA2 Q8TEP8 CEP192 Centrosomal protein of 192 kDa 1 GPQGS(1)PLLSR;GPQGS(0.996)PLLS(0.004)R 116.81 7.8145e-05 47009000.0 10433.2 10940.3 10497.7 10698.4 12761.6 10182.5 10702.099999999999 11215.4 10635.1 10985.0 12221.6 True False 11492.3707834841 11862.277475986195 11210.13704979826 11359.215870170718 11865.269241129974 10099.57709599711 11109.37427191382 10991.7000486889 10188.143731556485 10291.405225288177 10718.42067910561 1.0722074760404976 1.106718781724103 1.0458758230726284 1.0597844785392934 1.1069979054153025 0.9422635478084129 1.0364749252257222 1.0254962347312995 0.9505265781755664 0.9601605995321818 1.0 13.387804725058112 -7.257430681039773 24.99999997070077 0.9830032016690728 1.0770629166419035 0.6739757880536394 0.03199480274480149 165.05011555901163 1029321.38179621 0.004996316288990441 0.008462751044107096 5.528016351224569e-08 7.257430681039773 0.09405971497283061 GPQPPTVS(ph)PIR ddPTM_A549_MK2206_60min_R1 4 GPQPPTVSPIR 11 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GPQPPTVS(1)PIR;GPQPPTVS(1)PIR;GPQPPTVS(1)PIR;GPQPPTVS(1)PIR 145.81 2.0724e-11 1294533000.0 57547.3 65830.9 61320.7 57256.8 81104.0 63718.9 59523.4 62134.5 90159.0 85711.0 90113.0 True False 67259.87734359658 69181.41162349189 70016.89733245538 71284.71857035544 69173.70903781914 70461.59170481739 70338.0312966307 70942.2556539258 69738.13045433814 66348.82557112532 67735.45510772185 0.9929788946812428 1.0213471144981678 1.033681654919204 1.0523989018304976 1.0212333987836943 1.0402468189334533 1.0384226574512547 1.0473430132137456 1.029566131111563 0.9795287485056189 1.0 16.047623568130525 -10.371146741037485 0.8749280935952399 1.0010943092741993 1.0316626589060653 0.4413570269215139 0.016673353647834933 0.4710295885937411 0.6841362996297128 0.008368897655580925 0.002922904096588056 4.254546346479436e-11 10.371146741037485 0.030568349631866054 GPQPPTVS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 GPQPPTVSPIR 11 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GPQPPTVS(1)PIR;GPQPPTVS(1)PIR 164.68 9.050399999999999e-14 2207900000.0 41334.0 41886.0 39838.0 40369.0 49787.0 44262.0 44190.0 42871.0 45014.0 46238.0 50547.0 True False 45530.197251517435 45415.88021892979 42541.646245355034 42862.50144534899 46290.132875825744 43901.544947019305 45871.67463169585 42015.90427335111 43122.21812040164 43318.52478897353 44330.0394438332 1.0270732402393834 1.0244944689587379 0.9596573064018117 0.9668951795013944 1.0442159189701603 0.990333992430645 1.0347763098613059 0.9477975837712904 0.9727538856589133 0.9771821846416069 1.0 15.435997025729533 -8.250891737186578 24.810564642494615 0.9838240667158789 1.0049206172553158 0.20727810738115227 0.028192618573465632 1169.1792200395873 2750195.779973103 0.00466034059137821 0.005981942771957567 5.6118785394102065e-09 8.250891737186578 0.02109655053943693 GPRIS(ph)APNVDFNLEGPK ddPTM_A549_MK2206_60min_R1 2 GPRISAPNVDFNLEGPK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPRIS(1)APNVDFNLEGPK;GPRIS(1)APNVDFNLEGPK 132.65 1.0205e-12 84033000.0 2454.49 3406.4 3434.5 2862.4 3645.3999999999996 1938.63 2293.34 1918.48 4307.1 4680.2 5072.799999999999 True False 2868.7479054809614 3579.7712100892195 3921.5637441894546 3563.68812849802 3109.1664890321795 2143.774539841555 2710.0101925262143 2190.4304150985895 3331.5487270253666 3622.939569459932 3813.0837578423916 0.7523432706089371 0.9388126349773155 1.028449410827641 0.934594767599469 0.8153942285263308 0.5622154340125473 0.7107135233923253 0.5744511671409049 0.8737150659681553 0.9501337498838338 1.0 11.89674250617896 -5.238464925789437 21.332342606930435 0.8757278545992192 0.7523422783080724 0.0 0.1571566389810964 2325.7624153855127 2159267.0918611423 0.024262440040825766 1.319145498586373 5.774775086965007e-06 5.238464925789437 -0.12338557629114677 GPRIS(ph)APNVDFNLEGPK ddPTM_A549_PD325901_60min_R1 2 GPRISAPNVDFNLEGPK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPRIS(1)APNVDFNLEGPK;GPRIS(1)APNVDFNLEGPK 139.26 1.6802e-13 147515000.0 4631.4 4240.3 3953.7 4360.4 5178.299999999999 6075.7 5402.2 5374.2 4844.5 4612.4 5748.5 True False 5101.576318543524 4597.644962334146 4222.021857529499 4629.732004813093 4814.594072165192 6026.221513591917 5607.783677197267 5267.007365021656 4640.902512202551 4321.172276842889 5041.470942743884 1.0119221902659479 0.9119649829483734 0.8374583341804626 0.9183296020929367 0.9549978819365741 1.1953300102354791 1.1123308536109822 1.0447362336982986 0.9205453259394731 0.8571252965490735 1.0 12.299629012868966 -7.0021667716329725 24.620214610055356 0.9986880377203425 0.916360977477069 0.1893452981135637 0.09304543289597902 113.74763002055829 1292512.0250692386 0.014015591974974087 0.026183930400597494 9.950232492043483e-08 7.0021667716329725 -0.08232706024327352 GPRPGSPS(ph)ALLPGPGRPPPPPTKPPETEAQR ddPTM_A549_PD325901_60min_R1 1 GPRPGSPSALLPGPGRPPPPPTKPPETEAQR 31 3 H3BSG4;H3BMZ6;H3BQN8;Q9UJJ7 H3BSG4 RPUSD1 RNA pseudouridylate synthase domain-containing protein 1 1 GPRPGS(0.146)PS(0.854)ALLPGPGRPPPPPTKPPETEAQR 63.282 0.00018117 6594100.0 2017.2 1397.0 2010.3 1779.0 2067.2 1909.2 2146.7 2149.0 1750.5 2122.7 2566.5 True False 2221.9846590158477 1514.730092771927 2146.73104691594 1888.884789597857 1922.0070034528487 1893.6521081932424 2228.3938432193127 2106.1365091421144 1676.9325725277272 1988.672359737752 2250.8367703839563 0.9871816065261868 0.672963100968685 0.9537479905971781 0.8391922570536485 0.8539077683207501 0.8413102776307568 0.9900290738715739 0.935712681103411 0.7450262918184288 0.8835258006730167 1.0 11.136245721686844 -11.136799998835118 1.514116933247502 0.9997709855728881 0.8516050953797636 0.007469241726366094 0.1002704711518204 0.46216780907028404 1.9028048664861141 0.06789815912707788 0.014667264434587173 7.297935171719306e-12 11.136799998835118 -0.14816589019312454 GPRT(ph)PNLNPNPLINVR ddPTM_A549_MK2206_60min_R1 1 GPRTPNLNPNPLINVR 16 1 A0A0A0MTU3;Q4ZIN3-2;Q4ZIN3 A0A0A0MTU3 TMEM259 Membralin 1 GPRT(1)PNLNPNPLINVR 59.281000000000006 0.0021555999999999997 951330.0 472.37 800.14 790.81 762.58 798.26 599.51 901.05 654.01 1186.9 917.37 1108.6 True False 552.0945076623015 840.8637083257361 902.9587493208504 949.4121342335169 680.8370114486279 662.9497502774692 1064.7591216198832 746.7179203216241 918.0690450898305 710.1354798588645 833.3040241965136 0.6625367112497035 1.0090719400239445 1.083588610041214 1.1393346325777758 0.8170331495819942 0.7955676812153847 1.2777558858503566 0.8960930208414901 1.1017216027188261 0.85219254826423 1.0 9.702699136960357 -7.7275565618151 24.999993324652383 1.0511055223122856 0.9350195133664795 0.08218652382173641 0.1643320725956387 313.7532066228274 231498.03546227192 0.02293701472907132 0.034020180801898274 1.872593183609728e-08 7.7275565618151 -0.11608600894580612 GPRT(ph)PPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPIS(ph)PDR ddPTM_A549_PD325901_60min_R1 1 GPRTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDR 45 3 Q69YN4;Q69YN4-3;Q69YN4-4;Q69YN4-2 Q69YN4 KIAA1429 Protein virilizer homolog 2 GPRT(1)PPGPPPPDDDEDDPVPLPVS(0.219)GDKEEDAPHREDY(0.06)FEPIS(0.721)PDR 54.476000000000006 0.00052539 4852200.0 669.3 827.18 588.15 663.04 1011.3 791.34 752.99 877.35 630.46 991.99 845.46 True False 737.246843287382 896.889361588462 628.0653958332636 703.9944749269047 940.2697767956009 784.8955894079407 781.6454465019385 859.8505659822393 603.9639586837076 929.355582105927 741.4737798125151 0.9942992771420699 1.2096036110882362 0.8470500413272505 0.9494529598941621 1.268109274252897 1.0585614903421199 1.0541781351993067 1.1596506705869711 0.8145452679883334 1.2533896779747473 1.0 9.53425186640165 -8.760266186337345 24.999986227185616 0.9124241561803158 1.0669890600518859 0.0 0.15684057803552454 33.462032699988136 713053.2790669452 0.021525608608466883 0.023746608753370715 1.7367360279639123e-09 8.760266186337345 0.15456490387157007 GPRT(ph)PPITTK ddPTM_A549_MK2206_60min_R1 4 GPRTPPITTK 10 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GPRT(1)PPITTK;GPRT(1)PPITTK;GPRT(0.999)PPIT(0.001)TK;GPRT(1)PPITTK 93.228 0.00023899 104987000.0 12948.9 13311.0 12180.300000000001 12079.0 15885.800000000001 12823.2 11853.5 13824.2 16347.3 17539.5 17702.399999999998 True False 15134.35774979016 13988.473044122127 13907.64969379846 15038.355542246907 13549.019863792018 14180.142512648737 14007.12751581077 15783.822684836925 12644.662651273891 13577.31476828821 13306.405518614796 1.1373738556680975 1.0512585855401118 1.0451845672629292 1.1301591193210838 1.0182328987973364 1.0656628864054714 1.0526605022081814 1.1861822986498032 0.9502688486071487 1.020359311107303 1.0 13.699833285823876 -8.795985616777324 24.999999240920822 0.976515823815261 1.0807768494523617 0.41554514590975733 0.04952840490318146 103.99087661114625 75254.37131091609 0.008062055324181505 0.008582893096705492 1.599611004605034e-09 8.795985616777324 0.10426102563710071 GPRT(ph)PPITTK ddPTM_A549_PD325901_60min_R1 2 GPRTPPITTK 10 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GPRT(1)PPITTK;GPRT(1)PPITTK 95.631 0.00021908 166577000.0 9413.3 9731.5 10261.099999999999 9554.0 11088.400000000001 8944.2 9180.7 9956.0 9033.9 10595.6 10328.0 True False 10368.931286294797 10551.607657702225 10957.479951006884 10144.128881291697 10309.589036903337 8871.361400640062 9530.076562371803 9757.41976966909 8654.236599233498 9926.592007743586 9057.721474586207 1.1447615512783795 1.1649295782948839 1.2097391139428324 1.1199426820259033 1.1382099864551554 0.9794252810191805 1.0521494383671337 1.077248819920779 0.9554540425553169 1.0959259495442888 1.0 13.144932461783466 -7.230946509249648 0.8243384427629271 0.9840844871753902 1.179330413763272 0.5193717872985029 0.05369398757798406 0.2126932692409948 0.2822004089437631 0.007791288233338057 0.020201819170310466 5.875617162897513e-08 7.230946509249648 0.19524592658788187 GPRT(ph)PS(ph)PPPPIPEDIALGK ddPTM_A549_MK2206_60min_R1 2 GPRTPSPPPPIPEDIALGK 19 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK 83.60600000000001 7.0317e-05 2616100.0 1243.51 1275.6 1151.06 1200.5500000000002 2218.6 1663.81 1524.31 1642.5 2080.74 1851.41 1912.54 True False 1453.38408709941 1340.5225914718787 1314.2976163595026 1494.6848038947376 1892.2468789616478 1839.873269852307 1801.2573960117697 1875.329404945287 1609.455712259005 1433.175195139912 1437.6035345812745 1.0109769850577974 0.932470294643737 0.9142281475694293 1.0397058493112907 1.3162508532039716 1.279819662093555 1.2529583801673216 1.3044830231942266 1.1195407311848222 0.9969196379009653 1.0 10.489450145726508 -6.523197150230178 24.999431832055198 1.1260275309215475 0.954952525306505 0.390520147066855 0.11508544890748001 12.299927601687594 965739.1845035714 0.019938860657439585 0.04182603734331519 2.997801342603141e-07 6.523197150230178 -0.17107500561504252 GPRT(ph)PS(ph)PPPPIPEDIALGK ddPTM_A549_PD325901_60min_R1 4 GPRTPSPPPPIPEDIALGK 19 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK 59.356 0.0019947 7326700.0 2523.31 2960.0 2616.6 3122.7599999999998 3514.64 3243.1000000000004 3568.75 3028.46 3246.29 3588.1499999999996 3206.49 True False 2779.4745736373557 3209.449588120905 2794.17821089402 3315.645792897473 3267.7838112497666 3216.689268846379 3704.5607341449313 2968.0549895190898 3109.859720577569 3361.5935966424904 2812.1120576148246 0.9883939603725638 1.1412950559456347 0.9936226415045439 1.1790589154934796 1.1620389743719648 1.1438695197568722 1.317358859905129 1.0554540248429976 1.1058804403460678 1.195398166136283 1.0 11.457438369024217 -10.147978015145316 0.78703091843563 1.005761022857601 1.1260596111021748 0.0 0.1033470711710538 0.6969562236693433 0.8464331688805048 0.04390729734644419 0.017353073661374643 7.112495176141573e-11 10.147978015145316 0.12029858824457373 GPS(ph)FMTSPSPK ddPTM_A549_MK2206_60min_R1 1 GPSFMTSPSPK 11 0 E7ESG2;Q9HAW4-2;Q9HAW4 E7ESG2 CLSPN Claspin 1 GPS(0.369)FMT(0.369)S(0.259)PS(0.002)PK 43.083999999999996 0.025203 3150700.0 2025.8 2037.5 1733.8 2211.9 2683.3 2075.4 1808.8 1946.4 3394.2 2566.2 2969.9 True False 2367.705513945193 2141.200047133862 1979.6789109552112 2753.815599295964 2288.5901245460154 2295.0174504609768 2137.435546513562 2222.3081606000055 2625.419119423624 1986.4936376966978 2232.391864929847 1.0606137529620492 0.9591506225996524 0.8867972250102347 1.233571776782345 1.0251740120088344 1.0280531328370064 0.9574643144386887 0.9954830043558869 1.1760565699365366 0.8898498820497732 1.0 11.124374578840483 -8.66352190085775 20.004310111250458 1.0833103291869548 1.017635682116758 0.0 0.1071385241781547 6.740970617817197 1362.7000011572693 0.01698232500979488 0.019256131251947303 2.1700917661441333e-09 8.66352190085775 -0.06567464707019677 GPS(ph)PAPAS(ph)SPK ddPTM_A549_PD325901_60min_R1 2 GPSPAPASSPK 11 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(1)PAPAS(0.572)S(0.428)PK;GPS(1)PAPAS(0.741)S(0.259)PK 98.94200000000001 1.038e-07 18002000.0 4252.6 3525.4 4319.4 4470.2 5169.3 4969.5 4167.9 3804.7 4819.5 4508.1 4998.2 True False 4684.320821401347 3822.497830392375 4612.540458662243 4746.314101439202 4806.226201116876 4929.030039632473 4326.511715262394 3728.8122737705908 4616.9531752627145 4223.45779664284 4383.453086200307 1.0686371518719366 0.8720289131018891 1.0522618510924946 1.0827797191171569 1.0964475053348957 1.1244628247875437 0.987009928059417 0.8506563662126071 1.0532685269970146 0.963500170661994 1.0 12.097852092301922 -11.315659497133213 1.899064274688954 0.999856459596903 1.0247549465167398 0.020212277013247015 0.0844310828985032 2.1832963776668066 14.190669552026637 0.06583406569490326 0.012750312900851882 4.8343768643955406e-12 11.315659497133213 0.02489848691983687 GPS(ph)PAPAS(ph)SPKR ddPTM_A549_MK2206_60min_R1 4 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(0.999)PAPAS(0.667)S(0.334)PKR;GPS(0.999)PAPAS(0.606)S(0.394)PKR;GPS(0.999)PAPAS(0.654)S(0.347)PKR;GPS(0.993)PAPAS(0.593)S(0.414)PKR 59.294 0.0061158 104506900.0 9452.4 9580.9 8839.5 8502.3 12652.1 11107.1 9649.8 10154.0 12821.9 14461.0 14261.599999999999 True False 11047.734031007769 10068.52688666739 10093.074018565341 10585.363881682752 10790.992850135519 12282.445949703724 11403.043750965602 11593.360595320819 9917.760122366915 11194.250056399313 10720.051119863794 1.0305672899765181 0.9392237755294696 0.9415136090035344 0.9874359518741965 1.0066176671620783 1.1457450913592082 1.0637116953515504 1.0814650476655676 0.9251597787616639 1.0442347644832446 1.0 13.388024165027797 -4.97471146117794 15.721941607498755 0.9900952598532297 1.1314937171207848 0.0 0.0677352085791036 14836573.866695674 248149683.5920019 0.010152279890065924 52774863.57696222 1.0599577114983462e-05 4.97471146117794 0.14139845726755518 GPS(ph)PAPAS(ph)SPKR ddPTM_A549_PD325901_60min_R1 2 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(0.999)PAPAS(0.563)S(0.438)PKR;GPS(0.999)PAPAS(0.66)S(0.34)PKR 66.98899999999999 0.008214299999999999 49395000.0 6773.200000000001 7369.9 6600.5 6511.4 7773.200000000001 7256.5 6982.4 6291.0 7467.8 6951.1 7851.700000000001 True False 7460.810277833695 7990.987337666298 7048.449622030866 6913.59438953765 7227.237248084213 7197.405469884906 7248.119052915888 6165.52106980597 7153.954335974044 6512.206359717855 6885.990676027163 1.0834766744322941 1.1604702523757493 1.0235926758613376 1.0040086771547028 1.0495566416093276 1.0452243995830404 1.0525891471432622 0.8953716843199584 1.038914322216521 0.9457181495161475 1.0 12.749448512090613 -5.809931630118581 8.876317104442013 1.0158891586213659 1.1218059987783149 0.44126996610564073 0.04929637021893985 0.16459366058988928 28.110758359816295 0.005897121141158268 0.018525488598753755 1.5490604643874113e-06 5.809931630118581 0.10591684015694902 GPS(ph)PAPASS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(0.999)PAPAS(0.256)S(0.745)PKR;GPS(0.968)PAPAS(0.358)S(0.674)PKR 50.077 0.0074012 153159000.0 10403.6 10845.9 11912.7 12526.9 12763.2 10978.7 9832.8 10778.9 11175.099999999999 13722.8 13614.0 True False 11459.765813274464 11759.922056689367 12721.167458884507 13300.658162345924 11866.756862649676 10889.29310717639 10206.992584714615 10563.906383616539 10705.44940945706 12856.3400660523 11939.564306256458 0.959814405226615 0.9849540364322209 1.0654632893277756 1.1139986201486631 0.9939020016359701 0.9120343781280432 0.8548881954901858 0.8847815642720681 0.8966365216398468 1.0767846913237398 1.0 13.54346257086977 -7.04924538991507 5.7446524615638115 0.934493367066441 1.0330399229923581 0.29521629213427614 0.0678339989439364 0.18394568151412108 14.4157737316948 0.009554273749882235 0.0169284602814516 8.928008808708152e-08 7.04924538991507 0.0985465559259171 GPS(ph)PEPLK ddPTM_A549_MK2206_60min_R1 2 GPSPEPLK 8 0 Q92674-2;Q92674 Q92674-2 CENPI Centromere protein I 1 GPS(1)PEPLK;GPS(1)PEPLK 78.556 0.0042587 9546300.0 5788.0 6686.0 6080.2 5407.299999999999 7871.4 6905.6 5830.8 6063.0 8433.599999999999 8406.8 8967.6 True False 6764.872896986265 7026.288841785028 6942.463787282195 6732.088742742924 6713.527487180529 7636.34600843371 6890.180884902302 6922.44881715877 6523.403065691795 6507.698041223827 6740.697426830832 1.0035864938929322 1.0423682294086396 1.0299325644922508 0.9987228793190388 0.9959692687670335 1.1328717972175724 1.022176259903977 1.0269632916031048 0.9677638162077838 0.9654339349694634 1.0 12.718682152356532 -8.676642418035671 6.368871600896507 0.9848283510377204 1.0329987548933852 0.2985517003771323 0.036324342366552305 0.21160581288303312 12.949195458614753 0.0061609652427835546 0.006974504011982564 2.1055113261841303e-09 8.676642418035671 0.048170403855664845 GPS(ph)PPGAK ddPTM_A549_PD325901_60min_R1 2 GPSPPGAK 8 0 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 GPS(1)PPGAK;GPS(1)PPGAK 62.823 0.010181 18311500.0 7270.700000000001 7655.700000000001 7691.9 7219.2 8556.2 7599.4 8047.5 7633.5 8419.1 7574.3 9387.8 True False 8008.816111593551 8300.872706681483 8213.918589152221 7665.113588007227 7955.242029287569 7537.513005973044 8353.752016260967 7481.243854135094 8065.274505208905 7096.057405361877 8233.160114167345 0.9727511672962912 1.0082243745506199 0.9976629235010244 0.9310050432296776 0.9662440568352916 0.9155066707621469 1.014647097884822 0.9086722170338484 0.979608606339436 0.8618874535369742 1.0 13.007230567796876 -9.424529803455739 1.886379457271667 0.9939715530027422 0.9654903118446799 0.0 0.05212957677477549 0.4693498128761828 3.397488697623398 0.007110315353788487 0.006034270629611948 3.7624453160349236e-10 9.424529803455739 -0.028481241158062276 GPS(ph)PSPVGSPASVAQSR ddPTM_A549_MK2206_60min_R1 2 GPSPSPVGSPASVAQSR 17 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 GPS(0.994)PS(0.006)PVGSPASVAQSR;GPS(0.996)PS(0.004)PVGSPASVAQSR 151.59 6.9368e-17 66789000.0 5496.8 6278.4 6009.1 5486.4 7580.0 6324.9 6419.799999999999 6284.0 9069.8 9701.4 8758.9 True False 6424.5254561427255 6597.943742785388 6861.280738159516 6830.568246293855 6464.992041165283 6994.196719871169 7586.194560762804 7174.776243942881 7015.504781494435 7509.847002085084 6583.8233966578055 0.9758046455808724 1.0021447030512316 1.0421422818908779 1.0374774405038425 0.9819510110868336 1.0623305484502643 1.1522475776938124 1.0897583078527084 1.0655669751190116 1.1406513433968113 1.0 12.684709922337921 -5.094125666183453 0.8844680008120539 1.0448132529744851 0.9162694158573933 0.17603789464453412 0.0517783286462387 4.128417517004683 1.9609865214652669 0.007766743819545882 0.548525543451483 8.051454329573701e-06 5.094125666183453 -0.12854383711709183 GPS(ph)PSPVGSPASVAQSR ddPTM_A549_PD325901_60min_R1 2 GPSPSPVGSPASVAQSR 17 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 GPS(0.967)PS(0.033)PVGSPASVAQSR;GPS(0.971)PS(0.029)PVGSPASVAQSR 169.21 9.275299999999999e-30 86565000.0 10727.0 10868.099999999999 10209.0 10316.8 12410.400000000001 10778.1 10288.7 11518.0 11256.6 12115.3 13433.599999999999 True False 11815.997143199975 11783.992928600268 10901.844131704142 10954.045304847208 11538.736317555751 10690.32672706766 10680.242108692666 11288.264454303799 10783.524247880952 11350.337890389965 11781.352362606622 1.0029406454816947 1.0002241309751525 0.9253474300884174 0.9297782603985905 0.979406774571914 0.9073938541213811 0.906537872731078 0.9581467480874388 0.9153044502859687 0.9634155350802788 1.0 13.524217532881066 -4.1511550185570485 12.05333152163873 0.9545829753828579 0.9545479085409514 0.0 0.036604966927367914 0.0 0.0 0.005506082655864822 0.0 7.060654838506417e-05 4.1511550185570485 -3.506684190646148e-05 GPS(ph)SVEDIK ddPTM_A549_MK2206_60min_R1 2 GPSSVEDIK 9 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 GPS(0.749)S(0.251)VEDIK;GPS(0.5)S(0.5)VEDIK 171.87 1.5644e-07 202295000.0 19379.3 23812.0 19301.4 18574.8 27126.0 20844.0 18692.8 21256.8 29715.0 29547.0 29288.0 True False 22650.052061604332 25023.92909072468 22038.628752976638 23125.626833854447 23135.801333594907 23049.698244872616 22089.03979647762 24270.016496219774 22984.599945104314 22872.31217871729 22014.9812923214 1.0288472091277423 1.1366772816406057 1.0010741531115215 1.0504495337418445 1.0509116962849492 1.0470005828672728 1.0033640048643626 1.1024318473840768 1.0440435828633252 1.0389430667694874 1.0 14.426197997865291 -10.298987278321258 0.6963309761299822 0.9991756869541935 1.0526584584957501 0.05686338744176023 0.03901280175994671 0.8428892594989548 0.74937352304358 0.02394460561354453 0.007338753958920778 5.023573047327093e-11 10.298987278321258 0.05348277154155667 GPS(ph)SVEDIK ddPTM_A549_PD325901_60min_R1 1 GPSSVEDIK 9 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 GPS(0.5)S(0.5)VEDIK 153.1 1.7606e-05 129680000.0 20197.0 18118.0 21023.0 19767.0 21512.0 19701.0 21353.0 20005.0 20353.0 20171.0 21059.0 True False 22247.384571754446 19644.867445126525 22449.747201568818 20987.962695885813 20001.071332371168 19540.56158784573 22165.600099809937 19605.984581381086 19497.634189464057 18897.399617595605 18468.876503999894 1.2045878679699993 1.0636742002618265 1.2155448219444625 1.13639628763235 1.0829609114576861 1.0580265444740904 1.200159635861414 1.0615688819585167 1.0557022342556333 1.0232024462074292 1.0 14.172808486724872 -8.718304007005575 0.27682826194292304 0.9800337404504698 1.1713130747008242 0.46662912110676846 0.053193049598586194 0.9130465359130934 0.23551888486164316 0.059527268294192685 0.05594276230980657 1.912916410932554e-09 8.718304007005575 0.19127933425035448 GPS(ph)TPNVK ddPTM_A549_PD325901_60min_R1 1 GPSTPNVK 8 0 Q9Y4E8-2;Q9Y4E8-3 Q9Y4E8-2 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GPS(0.5)T(0.5)PNVK 123.29 0.0011417999999999999 49469000.0 10362.0 11396.0 11610.0 11840.0 14362.0 12522.0 12137.0 14237.0 13559.0 13608.0 14896.0 True False 11413.942611898772 12356.380914265479 12397.924416601536 12571.329909409014 13353.26266621024 12420.024983655876 12598.880176621231 13953.031866289564 12989.162382692633 12748.788557644184 13063.886433524032 0.8737019163461771 0.9458426462248646 0.9490226725169985 0.9622963253223759 1.0221508533588919 0.9507144023989749 0.9644052128538472 1.0680613259530365 0.9942801056016803 0.9758802346083432 1.0 13.67329653403507 -3.164524884456994 0.47292642964504095 1.0002862342959438 3.978928110846003e-09 0.5854857923753007 0.030384310382275913 12.723785281803728 0.3873776405000536 0.00547996319974461 10.930398510615976 0.0006846602519071724 3.164524884456994 -1.0002862303170157 GPS(ph)WDPFR ddPTM_A549_MK2206_60min_R1 2 GPSWDPFR 8 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(1)WDPFR;GPS(1)WDPFR 56.563 0.01852 12517900.0 1169.97 969.31 684.85 576.12 1741.04 1281.8899999999999 964.61 1206.4299999999998 1568.58 1270.69 1207.44 True False 1367.4323329797887 1018.6437387422443 781.9720280122713 717.2694258630092 1484.935322341742 1417.538748950285 1139.8671508859172 1377.4451470369213 1213.2991345075452 983.6402464674673 907.5993243512887 1.5066475880831753 1.1223496001061097 0.8615828670555586 0.7902930363855011 1.6361132963635767 1.5618552272099564 1.255914499165855 1.517679784547501 1.3368224302885605 1.0837824798630489 1.0 9.825911724792679 -5.251308942982135 22.90586918982085 1.2019313683323432 1.5066481141366925 0.08643916759888282 0.26717680785388725 888.2710349604432 2008325.361349262 0.03913009479725644 0.6813681522825087 5.606490066571845e-06 5.251308942982135 0.3047167458043494 GPS(ph)WDPFR ddPTM_A549_PD325901_60min_R1 2 GPSWDPFR 8 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(1)WDPFR;GPS(1)WDPFR 60.019 0.011501 26493000.0 1311.85 1529.2199999999998 1268.9 1315.0900000000001 1219.9699999999998 908.5500000000001 878.8399999999999 713.63 1163.97 963.73 1431.3600000000001 True False 1445.0280462670728 1658.0927361980564 1355.0151845155633 1396.3201225139105 1134.2835158680195 901.1510700287923 912.2847371197007 699.3960898180954 1115.0523887147092 902.8799233288096 1255.3117941386245 1.1511307812244596 1.320861274418133 1.0794252000518754 1.1123293264937766 0.9035870778592878 0.7178703125681603 0.7267395569605848 0.5571493019373807 0.888267276640893 0.7192475427575759 1.0 10.293830029706148 -6.587017653801644 2.102618688640615 0.8782406711929891 1.2014537045833291 0.5810694737880546 0.1426179920284591 0.2338054347340784 2.070962996844444 0.023753283241033585 0.0599797847042977 2.588107708039803e-07 6.587017653801644 0.32321303339034 GPS(ph)WDPFRDWYPHSR ddPTM_A549_MK2206_60min_R1 2 GPSWDPFRDWYPHSR 15 1 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(0.999)WDPFRDWY(0.001)PHSR;GPS(0.996)WDPFRDWY(0.004)PHSR 46.621 0.012816999999999999 8056400.0 103.63 130.53 244.59 203.316 442.16999999999996 448.46000000000004 320.73 329.36 485.15 0.0 177.43 True False 121.12021048975231 137.1734194612922 279.2765398722663 253.1284291272021 377.1273787390571 495.9157395363447 379.0024894036348 376.04778862269717 375.26429962535263 0.0 133.3692341811181 0.9081570516125829 1.0285237094111823 2.094010223474802 1.8979521827608956 2.8276939659630242 3.718366852604711 2.841753510325641 2.8195992196522384 2.8137246339417095 0.0 1.0 7.059282091578961 -5.765157341450178 3.564540630560435 2.2121042989455977 0.9122098785096255 0.20228455053907002 0.9647819474753782 0.26913075908109807 7.133957559925063 0.13169623427851285 0.5368015386004034 1.7172861152876155e-06 5.765157341450178 -1.2998944204359721 GPS(ph)WDPFRDWYPHSR ddPTM_A549_PD325901_60min_R1 1 GPSWDPFRDWYPHSR 15 1 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(0.999)WDPFRDWY(0.001)PHSR 60.333999999999996 0.0023758000000000004 6250100.0 134.15 453.9 257.22 298.0 346.44 421.02 430.89 168.06 488.7 348.23 325.0 True False 147.7688092439896 492.1517459621883 274.6764959895131 316.4067831928958 322.10724955311764 417.59135270873605 447.28775474205526 164.70791145948053 468.16163850002874 326.24269837069653 285.027060344744 0.5184378250446161 1.7266842852286526 0.963685678325729 1.1100938374419524 1.13009357484698 1.4650937079576016 1.569281717325558 0.5778676286394147 1.6425164611871628 1.14460254396934 1.0 8.15495508439209 -7.046469176435719 23.65892035370029 1.2828872805495497 1.1179536392637992 0.02297158291219714 0.3807393866323282 683.3673672665763 347922.6984953168 0.05671628324971128 0.09823883134254918 8.985263622095432e-08 7.046469176435719 -0.1649336412857505 GPSES(ph)SKER ddPTM_A549_MK2206_60min_R1 1 GPSESSKER 9 1 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 GPSES(0.5)S(0.5)KER 47.288000000000004 0.009684100000000001 22734000.0 5031.4 4065.4 2626.4 1360.5 626.04 632.21 355.77 485.21 673.42 5483.8 5475.6 True False 5880.577314080288 4272.311495272638 2998.86301288082 1693.8225610751658 533.9503453101736 699.1100425729663 420.40880383852834 553.990003393305 520.8914452307632 4245.005771335496 4115.857401127936 1.428761188973344 1.0380125157158813 0.7286119805946125 0.411535773958296 0.12973004000669372 0.16985769292720823 0.10214367575594742 0.1345989302840001 0.1265572138354489 1.0313782421548832 1.0 12.006977283840191 -5.670720509325893 1.6999111411629244 0.4415372167882913 1.4472743462658457 0.5104095574777652 0.3243389789108816 0.3871363871988485 1.8040456227302866 0.05699936510202782 0.48979444804923666 2.1344180782646385e-06 5.670720509325893 1.0057371294775543 GPSESS(ph)KER ddPTM_A549_MK2206_60min_R1 1 GPSESSKER 9 1 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 GPSES(0.15)S(0.85)KER 60.598 0.0022345 15596000.0 9559.7 6497.4 3734.7 2126.1 655.64 689.28 526.8 445.22 603.68 8674.4 8536.1 True False 11173.143647774634 6828.089907360762 4264.336618263023 2646.994595444255 559.1962245210563 762.2191520929658 622.5127409903499 508.33129842906624 466.9474438788679 6714.847015367559 6416.350785624993 1.7413548637033098 1.0641702948439504 0.6646046578090338 0.4125389468067278 0.08715175388693888 0.11879324830565992 0.0970197487308533 0.07922436216671898 0.07277461277912103 1.046521183101664 1.0 12.647537301587025 -4.176536640279041 12.297171867497246 0.5239387654851786 0.6895369643128914 0.0 0.5430872339289251 0.0 0.0 0.07569970971369122 0.0 6.65983331672459e-05 4.176536640279041 0.16559819882771276 GPSESS(ph)KER ddPTM_A549_PD325901_60min_R1 2 GPSESSKER 9 1 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 GPSES(0.374)S(0.626)KER;GPSES(0.05)S(0.95)KER 86.463 0.00033221 72881000.0 19301.9 18045.3 13625.5 12372.1 14858.199999999999 11633.0 8294.3 9820.6 11944.2 17700.1 20097.7 True False 21261.414678692243 19566.040760985852 14550.208366787618 13136.29651792223 13814.611290007317 11538.26470490886 8609.944125315113 9624.720428888344 11442.22681107437 16582.51266528203 17625.81030981712 1.206265942102542 1.1100789363475718 0.8255057844735529 0.745287523638312 0.7837716988428576 0.6546232202716005 0.4884850099923972 0.5460583235442868 0.6491745122606559 0.9408085287316408 1.0 14.105401963476908 -5.736806096165282 2.7746548549670003 0.7644865931217706 1.195722004892888 0.5515439587373585 0.14675857457728753 0.2044575026914815 3.073674761817141 0.02615547914446499 0.1264829981453481 1.833132696917858e-06 5.736806096165282 0.43123541177111746 GPSFMT(ph)SPSPK ddPTM_A549_MK2206_60min_R1 1 GPSFMTSPSPK 11 0 E7ESG2;Q9HAW4-2;Q9HAW4 E7ESG2 CLSPN Claspin 1 GPS(0.036)FMT(0.482)S(0.482)PS(0.001)PK 55.426 0.018082 1800200.0 2754.4 3619.4 2881.2 2686.9 3451.9 2452.5 2715.1 2424.6 4111.7 4070.3 4958.1 True False 3219.2753813854456 3803.612000292663 3289.797484279708 3345.1906206195254 2944.1300827042796 2712.021922162255 3208.398525176345 2768.294475026084 3180.406515035685 3150.8164030538783 3726.866933401351 0.863802072602402 1.0205923818217115 0.8827246969285408 0.8975878882712117 0.7899745645110272 0.7276948629038144 0.8608835739268474 0.7427940209551782 0.8533727047058975 0.8454330297696633 1.0 11.863747593680786 -10.434405769393432 0.938437604758931 0.9938904646778692 0.8500799031239993 0.0 0.08745782397406254 0.49627282883198376 0.8299658178374721 0.043275326449972715 0.015065006282321174 3.67785184540546e-11 10.434405769393432 -0.14381056155386995 GPSFMT(ph)SPSPK ddPTM_A549_PD325901_60min_R1 2 GPSFMTSPSPK 11 0 E7ESG2;Q9HAW4-2;Q9HAW4 E7ESG2 CLSPN Claspin 1 GPS(0.062)FMT(0.79)S(0.139)PS(0.009)PK;GPS(0.145)FMT(0.425)S(0.215)PS(0.215)PK 59.265 0.0046297 8855900.0 5497.6 5878.200000000001 5736.7 5957.299999999999 7099.2 6333.4 5576.5 5957.3 6130.200000000001 6960.1 7331.4 True False 6055.712304880784 6373.5765435446965 6126.026959579499 6325.268890990055 6600.576682910444 6281.822890232079 5788.716759077887 5838.476978088555 5872.569012344745 6520.638098181904 6429.684277573716 0.9418366506739189 0.9912736408808254 0.9527725927300424 0.9837604177629913 1.026578662024322 0.9770033206984413 0.9003111986802403 0.9080503374718958 0.9133526249224787 1.0141459232960206 1.0 12.65053218203464 -7.556729969472339 24.997467479365632 0.9489303601568319 0.9810027818474478 0.13990333898371066 0.03894417626597628 321.2586685793776 237232.58235294413 0.006650020532876883 0.009863599896759 2.7750450032769837e-08 7.556729969472339 0.03207242169061597 GPSLDIDT(ph)PDVNIEGPEGK ddPTM_A549_MK2206_60min_R1 2 GPSLDIDTPDVNIEGPEGK 19 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPSLDIDT(1)PDVNIEGPEGK;GPSLDIDT(1)PDVNIEGPEGK 233.37 1.3960999999999997e-75 13517900.0 4215.0 4116.8 4703.4 3869.3 6614.5 4976.7 4226.6 4783.5 7170.0 5475.6 6751.9 True False 4926.388953143935 4326.327535725485 5370.412844495757 4817.278673699479 5641.515812175166 5503.331090733904 4994.518510003441 5461.575773854361 5546.006448137234 4238.658157030639 5075.216887039908 0.9706755519599526 0.8524419018964905 1.0581642053977363 0.9491769082816734 1.1115812265247935 1.0843538735826699 0.984099521491872 1.0761265765412036 1.0927624516500045 0.8351678857024794 1.0 12.309253761180779 -5.773802389296021 24.999419500730625 1.0444261606199101 0.9115587254778609 0.16528574778322747 0.08262627785170756 123.83929600154563 250418.89970262 0.0075294920039894325 0.023651731473591536 1.6834398780004702e-06 5.773802389296021 -0.13286743514204924 GPSLDIDT(ph)PDVNIEGPEGK ddPTM_A549_PD325901_60min_R1 2 GPSLDIDTPDVNIEGPEGK 19 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPSLDIDT(1)PDVNIEGPEGK;GPSLDIDT(1)PDVNIEGPEGK 282.67 1.7246999999999995e-126 33268000.0 5293.6 6861.099999999999 6190.0 6037.1 7067.799999999999 5536.1 6287.5 5844.299999999999 5323.2 5692.3 6319.2 True False 5831.002375057645 7439.308976032539 6610.09062349384 6409.99795575111 6571.382110586317 5491.015837088103 6526.774253152017 5727.730851735342 5099.484415926646 5332.887206546002 5541.978460709252 1.0521517570660863 1.342356169150551 1.1927312006636512 1.156626284493132 1.1857465988320213 0.9908042544765453 1.177697513518797 1.0335173426499238 0.9201559428785696 0.9622713701170734 1.0 12.436185388356131 -7.7535957801752655 0.7887493168642631 0.9628274764209377 1.2036132228256906 0.516266057108849 0.08471792301430542 0.3106017111124169 0.38972985326568305 0.016640236752620233 0.030619811605307096 1.7636167700068397e-08 7.7535957801752655 0.24078574640475292 GPSPAPAS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 GPSPAPASSPK 11 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 GPSPAPAS(0.666)S(0.334)PK 64.439 0.0062052 5657100.0 2267.2 2436.7 2753.2 2273.2 2469.0 2751.7 2276.3 2107.0 2532.9 2821.0 3744.5 True False 2497.3644749755736 2642.0492605993923 2940.048708336547 2413.610401188223 2295.585957587599 2729.291067523227 2362.9258421391564 2064.9742320904747 2426.451021397016 2642.8815785651277 3283.9502383412137 0.7604757361478901 0.8045338902376128 0.8952780934407891 0.7349716731418513 0.6990318948155388 0.8311000074416001 0.7195376515000774 0.6288080154142448 0.7388817872656509 0.8047873404744702 1.0 11.68121655080269 -10.618922946871784 0.9316278016757888 0.9979304013660784 0.7583761724001764 0.19016597943174252 0.08689391076263774 0.2972392571245251 0.4661948768650289 0.04640998593343255 0.013064219158221648 2.4047894232284293e-11 10.618922946871784 -0.23955422896590195 GPSPAPAS(ph)SPKR ddPTM_A549_PD325901_60min_R1 1 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 GPSPAPAS(0.5)S(0.5)PKR 58.32 0.005173 50816000.0 3050.1 2868.0 2948.4 3497.5 3549.8 3131.6 3273.1 3679.0 3629.2 3734.2 4087.2 True False 3359.743906635056 3109.6964252468733 3148.496154169505 3713.5326316011838 3300.4742941451836 3106.0972878786715 3397.659611609046 3605.619458880334 3476.6773448829604 3498.4219747174425 3584.5003108954998 0.9372977026735719 0.8675397281441417 0.8783640343395396 1.0359972965585957 0.9207627306135289 0.8665356447138064 0.9478753848288058 1.005891796946046 0.9699196661568702 0.9759859593493653 1.0 11.80755630198861 -7.729366241105712 0.28848532080708994 1.003763227615476 0.8887174148475231 0.25634689301964353 0.047827034566186935 1.9236208701640571 0.3768719343589127 0.03518833819142263 0.07766591179628372 1.864806433853657e-08 7.729366241105712 -0.11504581276795289 GPSPAPASS(ph)PKR ddPTM_A549_MK2206_60min_R1 1 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 GPSPAPAS(0.17)S(0.83)PKR 92.15100000000001 0.00011204 40466000.0 3596.0 3791.5 3153.3 3255.6 4329.8 3474.9 3069.2 3448.4 4561.4 4794.2 4958.9 True False 4202.916886240949 3984.4711551941277 3600.4853558167433 4053.222146149439 3692.8921556513765 3842.611611548062 3626.833911631703 3937.2212602820873 3528.250183059018 3711.186890283495 3727.4682713224724 1.127552692688593 1.068948375992607 0.9659332001609026 1.0873927961595746 0.9907239678102401 1.030890495061072 0.9730019540434437 1.0562722399472488 0.9465540485492118 0.9956320537550274 1.0 11.8639803568219 -2.00000000009538 0.36176885850377266 0.9802735618588415 2.717898503971284 0.41509102764659234 0.04142299290094728 33.697023848752266 0.41010325683939874 0.010316340721794512 40.98467001686549 0.009999999997803792 2.00000000009538 1.7376249421124426 GPSQATS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 GPSQATSPIR 10 0 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GPSQAT(0.014)S(0.986)PIR;GPSQAT(0.019)S(0.98)PIR 63.211999999999996 0.0066518 19817600.0 4676.1 4991.4 4034.4 4953.8 6719.8 4926.9 4350.299999999999 4746.7 7166.200000000001 6547.8 6961.200000000001 True False 5465.311360331286 5245.440940006851 4606.53858481815 6167.481222384534 5731.326321665236 5448.261287788468 5140.693198804702 5419.559261159087 5543.06714206988 5068.647432355403 5232.541920653776 1.0444849641354477 1.0024651535618205 0.8803634361026944 1.1786778426065514 1.0953235365478236 1.0412264957272885 0.9824466343047285 1.035741202524746 1.0593450040391277 0.968677845149897 1.0 12.353296249380444 -4.885227330447076 17.46725655754419 1.029964725134004 2.5133620083380186 0.001026833806076044 0.07227439446333021 1372.544424549342 218585.6494519266 0.0091478394047968 3764.3761331886008 1.3024848173022669e-05 4.885227330447076 1.4833972832040145 GPSQATS(ph)PIR ddPTM_A549_PD325901_60min_R1 1 GPSQATSPIR 10 0 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GPSQAT(0.044)S(0.956)PIR 69.721 0.0034661 18950000.0 5304.6 6253.1 4962.4 5987.1 6706.7 4927.0 4559.6 5586.8 6104.0 5457.2 6432.4 True False 5843.119086959879 6780.070682256358 5299.178305335351 6356.909569309346 6235.6445288589475 4886.876145541642 4733.11807310886 5475.366891240189 5847.470107231788 5112.631460668419 5641.255578343175 1.0357834361186646 1.2018726306755367 0.9393615005990755 1.1268607637125274 1.1053646554851435 0.8662745514141209 0.839018549572428 0.9705936586635369 1.0365547219098301 0.9062931805989879 1.0 12.461800584706374 GPSQEEEDNHS(ph)DEEDR ddPTM_A549_MK2206_60min_R1 2 GPSQEEEDNHSDEEDR 16 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDR;GPSQEEEDNHS(1)DEEDR 208.44 1.3814e-46 31549000.0 1726.49 1620.44 1522.9 1521.82 2928.4 2728.6 1733.3 2382.8999999999996 2574.3 2175.0 2318.9900000000002 True False 2017.879303372116 1702.9134745411513 1738.8701196756795 1894.6659683170967 2497.6362392280225 3017.3386409019076 2048.2181738013924 2720.6833723251907 1991.2251603123668 1683.6659893968954 1743.1207821319445 1.157624488249245 0.9769337225492676 0.9975614641854788 1.0869390048805472 1.43285322786024 1.730998030561896 1.1750294040418099 1.5608117350294148 1.1423334405301366 0.9658917538334135 1.0 10.767456822998678 -4.040866417795334 16.27926804545218 1.1599873260888434 1.1362770223078276 0.0 0.25049199113589043 0.0 0.0 0.034651503113899446 0.0 9.1019319080106e-05 4.040866417795334 -0.023710303781015796 GPSQEEEDNHS(ph)DEEDR ddPTM_A549_PD325901_60min_R1 3 GPSQEEEDNHSDEEDR 16 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDR;GPSQEEEDNHS(1)DEEDR;GPSQEEEDNHS(1)DEEDR 225.5 2.2317e-55 42084500.0 2714.17 2660.7 2500.97 2805.65 3320.8 2838.9 2800.5199999999995 2485.21 2577.65 3087.2200000000003 3265.64 True False 2989.710540333651 2884.9265267274623 2670.700863754343 2978.948628406534 3087.5584641380715 2815.780939634297 2907.0953211033457 2435.6405369404724 2469.3203345193347 2892.29240233174 2863.986982597568 1.0438980897958043 1.0073113265727565 0.932511523265403 1.0401404219039776 1.0780630229463297 0.9831682045846628 1.0150518625844729 0.8504370137644287 0.8621967730732212 1.0098832222025325 1.0 11.483809219937227 -8.214650308094672 24.124530380805393 0.9267713158843658 1.0131395732526314 0.3327952015118416 0.05688409768624404 273.5477446332592 141041.67713464363 0.010442001653643646 0.013480540374811502 6.100278911731572e-09 8.214650308094672 0.08636825736826559 GPSQEEEDNHS(ph)DEEDRAS(ph)EPK ddPTM_A549_MK2206_60min_R1 2 GPSQEEEDNHSDEEDRASEPK 21 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 GPSQEEEDNHS(1)DEEDRAS(1)EPK;GPS(0.019)QEEEDNHS(0.981)DEEDRAS(1)EPK 214.19 8.319799999999997e-67 82619000.0 2137.57 1495.79 1454.15 1145.5 2047.11 1789.48 1669.23 1962.6 2664.21 2719.6000000000004 2311.85 True False 2498.3395574310507 1571.9193219643485 1660.3703358896762 1426.147551423449 1745.98283079022 1978.8415858393128 1972.507484136905 2240.804560210425 2060.770688869136 2105.2404711557692 1737.7538411859193 1.4376832312026855 0.9045696143543563 0.9554692365154358 0.820684447717971 1.004735417300925 1.1387352678724996 1.1350902742305433 1.289483301433074 1.185881820559105 1.2114722012175563 1.0 10.76300801856814 -7.251398407192787 21.4021381071305 1.1137577656828666 1.0027860088082081 0.10584706112632358 0.16343888253261873 197.88824374227292 421789.0138696377 0.024279307357348668 0.041627605237782514 5.605335254410327e-08 7.251398407192787 -0.11097175687465843 GPSQEEEDNHS(ph)DEEDRAS(ph)EPK ddPTM_A549_PD325901_60min_R1 4 GPSQEEEDNHSDEEDRASEPK 21 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 GPS(0.071)QEEEDNHS(0.93)DEEDRAS(1)EPK;GPSQEEEDNHS(1)DEEDRAS(1)EPK;GPSQEEEDNHS(1)DEEDRAS(1)EPK;GPS(0.001)QEEEDNHS(0.999)DEEDRAS(1)EPK 142.28 4.6096e-21 239149000.0 3948.07 3828.1099999999997 4102.67 2831.7799999999997 4311.67 3350.1899999999996 4069.89 4153.24 3499.94 4290.88 4329.610000000001 True False 4348.875159984478 4150.718264453213 4381.1018575588805 3006.6926191609987 4008.833173653997 3322.907163391952 4224.77189107926 4070.4003700462517 3352.8496931692057 4019.953104513836 3797.0954176591013 1.1453162698412114 1.0931298289607163 1.1538034670352892 0.79184015370744 1.0557630853863114 0.8751181621452419 1.1126325326014115 1.0719773727876563 0.8830038027425258 1.0586916214478819 1.0 11.89068053772864 -6.218914241363896 24.99987750895334 0.95949199178248 1.1269879279539305 0.3103273362832537 0.09540940666231572 371.9387242153227 218656.64805739667 0.012549261452687394 0.03320195315862748 6.040679008085534e-07 6.218914241363896 0.16749593617145053 GPSQEEEDNHS(ph)DEEDRAS(ph)EPKSQDQDSEVNELSR ddPTM_A549_PD325901_60min_R1 3 GPSQEEEDNHSDEEDRASEPKSQDQDSEVNELSR 34 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 GPSQEEEDNHS(1)DEEDRAS(0.828)EPKS(0.172)QDQDSEVNELSR;GPSQEEEDNHS(1)DEEDRAS(0.999)EPKS(0.001)QDQDSEVNELSR;GPSQEEEDNHS(1)DEEDRAS(0.602)EPKS(0.397)QDQDS(0.002)EVNELSR 154.16 4.6678e-51 145430000.0 2276.7200000000003 2809.88 2473.36 2445.82 3153.35 2845.5 2281.86 2745.79 2597.32 2927.68 3033.38 True False 2507.8509383673218 3046.678448874719 2641.217083121927 2596.8927465397583 2931.8695744669308 2822.3271914225193 2368.697430981705 2691.0230644194157 2488.163672823601 2742.825785159006 2660.2934901801227 0.9426970924916711 1.1452414781003861 0.9928292095858551 0.9761677634913614 1.1020850087741334 1.0609082049933616 0.8903895151889146 1.0115511970212026 0.9352966813654582 1.0310237555681478 1.0 11.37736970086613 -7.72641036348824 24.99993261464965 0.9671070726400757 1.0398231902312065 0.18936003938475532 0.06407958986973192 188.8094482727055 134751.4802547234 0.008937304494563012 0.01325586827562792 1.8775418949526384e-08 7.72641036348824 0.07271611759113084 GPSQEEEDNHS(ph)DEEDRASEPK ddPTM_A549_MK2206_60min_R1 4 GPSQEEEDNHSDEEDRASEPK 21 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK 351.37 1.3791999999999993e-231 617182000.0 7463.210000000001 8549.23 8174.01 7502.37 10823.3 8613.189999999999 7988.92 7931.23 11296.300000000001 12510.849999999999 12059.8 True False 8722.817390034008 8984.349290286247 9333.207529667212 9340.450986794182 9231.206907538815 9524.632048827198 9440.403353744545 9055.506140873193 8737.70608648433 9684.640295837315 9065.01882645239 0.9622503336209504 0.9911010073216018 1.0295850133738529 1.030384069312472 1.018332899717922 1.0507018497340153 1.0414102314047882 0.9989506160151109 0.9638927677664676 1.0683530262040741 1.0 13.14609430085891 -8.518904808306127 24.049595841414206 0.9828689564602164 1.0189914980187211 0.0 0.035302751362304534 101.19693020168427 612430.2935585101 0.004517565853628225 0.0051823784810086275 3.0275769608162805e-09 8.518904808306127 0.036122541558504695 GPSQEEEDNHS(ph)DEEDRASEPK ddPTM_A549_PD325901_60min_R1 4 GPSQEEEDNHSDEEDRASEPK 21 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3;H3BPD0 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK 270.88 1.6370999999999997e-112 781228000.0 9295.2 9726.0 9708.2 9814.8 10923.5 10217.1 10069.900000000001 10369.3 10300.6 11523.0 11344.8 True False 10238.841861235429 10545.644153399975 10367.0568321491 10421.03790497192 10156.271044029218 10133.895325068703 10453.115554960716 10162.476176941522 9867.7016033014 10795.435813472523 9949.461520612476 1.0290850253577482 1.0599210953831397 1.0419716494879128 1.0473971765589998 1.020786001633183 1.018537063948047 1.0506212354613171 1.0214096668335004 0.9917824781630953 1.0850271435401229 1.0 13.280402731668719 -8.586411524478269 3.88376274998135 0.9961752472798989 1.0381821702464775 0.0 0.029301479074905705 0.0872448085546376 2.6793187875172264 0.002087389725428167 0.0023900793099542058 2.5917223595208134e-09 8.586411524478269 0.0420069229665786 GPSS(ph)VEDIK ddPTM_A549_PD325901_60min_R1 1 GPSSVEDIK 9 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 GPS(0.032)S(0.968)VEDIK 172.56 1.4449000000000002e-07 131000000.0 12496.0 13869.0 13526.0 13460.0 15488.0 13553.0 14719.0 13719.0 12898.0 14223.0 16069.0 True False 13764.584720931005 15037.789303259739 14443.955698445508 14291.393630122075 14400.176310699364 13442.628861482835 15279.139599545852 13445.363782652707 12355.941914003208 13324.957352687634 14092.614869783672 0.9767232588214693 1.0670687762497957 1.0249308472493033 1.0141051722604446 1.0218242990216913 0.9538775440678161 1.0841947885985472 0.9540716117546962 0.8767671598331898 0.9455276735943453 1.0 13.782651706573853 -8.493681778841687 23.324772111925768 0.9404179113663018 1.0195802755532684 0.424346074241453 0.04293225101014033 266.2477064411017 212699.19322661424 0.00867056576959594 0.01047025894126612 3.2086195193065256e-09 8.493681778841687 0.07916236418696654 GPSSEGPEEEDGEGFS(ph)FKYSPGKLR ddPTM_A549_MK2206_60min_R1 1 GPSSEGPEEEDGEGFSFKYSPGKLR 25 2 P84157-2;P84157-3;P84157;Q6ZR64 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 GPSSEGPEEEDGEGFS(0.5)FKYS(0.5)PGKLR 68.76 2.9575e-05 10994000.0 1820.2 2032.7 1467.9 1625.7 2588.3 1623.4 1744.2 1506.7 3043.8 2432.4 3157.6 True False 2127.405260382584 2136.155747636319 1676.0702926468762 2023.996572980445 2207.564498700278 1795.1871104742934 2061.098562709506 1720.279339075229 2354.3841599498073 1882.919150624832 2373.4807746733823 0.8963229376380093 0.9000097116566188 0.7061655230291564 0.8527545681337865 0.9300957994926518 0.7563520756646244 0.8683864578566627 0.7247917730919724 0.9919541734117467 0.7933155265957201 1.0 11.212788648566486 -8.797658310512862 19.211483343020078 0.9962018343940674 0.8306138449835972 0.07470570979273405 0.09261010329180457 7.745316399397612 4108.08198924022 0.011423147593912527 0.012161842124833662 1.5934619206318002e-09 8.797658310512862 -0.16558798941047015 GPSSEGPEEEDGEGFS(ph)FKYSPGKLR ddPTM_A549_PD325901_60min_R1 1 GPSSEGPEEEDGEGFSFKYSPGKLR 25 2 P84157-2;P84157-3;P84157;Q6ZR64 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 GPSSEGPEEEDGEGFS(0.562)FKYS(0.438)PGKLR 106.1 1.2574e-12 19822000.0 2664.4 3028.4 3216.4 3115.9 2989.3 3508.2 3277.7 3690.0 3363.4 3154.1 3653.8 True False 2934.8879265723876 3283.613896170725 3434.6842457844223 3308.3620662776652 2779.341880525156 3479.630382340002 3402.434667126262 3616.400055250998 3222.047994538564 2954.9495877179256 3204.40576334654 0.915891476710902 1.0247185090384632 1.0718630845918182 1.0324416789285005 0.8673501690443016 1.085889440763591 1.0617989475755123 1.128571199258545 1.0055056171081154 0.9221521261501873 1.0 11.645841127696814 GPSSEGPEEEDGEGFSFKYS(ph)PGK ddPTM_A549_MK2206_60min_R1 3 GPSSEGPEEEDGEGFSFKYSPGK 23 1 P84157-2;P84157-3;P84157;Q6ZR64 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 GPSSEGPEEEDGEGFS(0.004)FKYS(0.996)PGK;GPSSEGPEEEDGEGFS(0.001)FKYS(0.999)PGK;GPSSEGPEEEDGEGFS(0.05)FKYS(0.95)PGK 121.23 5.2341e-16 30036000.0 6419.1 6085.2 5431.5 5920.0 7917.499999999999 7979.000000000001 7636.8 9217.8 9074.9 7887.5 8705.3 True False 7502.487148072655 6394.910688009314 6201.768372853406 7370.400265758902 6752.846238248826 8823.332483968457 9024.307707659647 10524.451378328567 7019.449639637457 6105.708271893339 6543.533755942553 1.1465497738525796 0.9772870327446135 0.9477705173020967 1.1263639098775067 1.0319876828198806 1.348404824221391 1.3791183853012392 1.6083742777013594 1.0727307142356677 0.933090360594289 1.0 12.675854240772903 -4.28421326475185 16.736977527515137 1.109206307477401 12.536328069503408 0.0 0.20772059010661043 0.0 0.0 0.028757170702111628 0.0 5.197407098611514e-05 4.28421326475185 11.427121762026008 GPSSEGPEEEDGEGFSFKYS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 GPSSEGPEEEDGEGFSFKYSPGK 23 1 P84157-2;P84157-3;P84157;Q6ZR64 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 GPSSEGPEEEDGEGFSFKYS(1)PGK;GPSSEGPEEEDGEGFS(0.017)FKYS(0.983)PGK 241.54 7.643799999999999e-99 64850000.0 19829.3 18809.5 19658.7 17364.4 21345.3 16248.8 17170.6 18144.1 18252.4 18729.2 18660.9 True False 21842.355938440884 20394.642576946004 20992.85759936645 18436.959550586296 19846.079765287395 16116.475160072465 17824.036579112853 17782.2016917289 17485.315102430784 17546.635115654728 16365.7276011915 1.334640076549402 1.2461800094644848 1.2827329227842013 1.126559111813886 1.212661010185854 0.9847698527561409 1.0891074942378476 1.0865512444698318 1.0684104934728214 1.0721573487742306 1.0 13.998390123899496 -3.7745761938957205 0.2589684090647308 1.0098099124342648 2.0133879374387753 0.7664462816314244 0.053288484823541045 5.47827042785411 0.14845003430483822 0.022670808111774667 2.0292296115566613 0.0001680443077990301 3.7745761938957205 1.0035780250045105 GPSSEGPEEEDGEGFSFKYS(ph)PGKLR ddPTM_A549_MK2206_60min_R1 1 GPSSEGPEEEDGEGFSFKYSPGKLR 25 2 P84157-2;P84157-3;P84157;Q6ZR64 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 GPSSEGPEEEDGEGFS(0.027)FKYS(0.973)PGKLR 151.65 2.4346999999999998e-33 12128000.0 1894.7 2129.0 1647.1 1981.7 2883.3 2170.7 2723.7 2156.4 2952.0 2948.8 2900.8 True False 2214.4790390324592 2237.3570063057637 1880.6835472570808 2467.216588961894 2459.170389484413 2400.402033205956 3218.5610338561423 2462.076303698033 2283.376713375329 2282.6640319694557 2180.451301992826 1.0156058229819367 1.026098131272608 0.862520316568514 1.1315164831734508 1.1278263299147528 1.1008739479813678 1.4760985631344001 1.1291590421890256 1.047203719380678 1.0468768689689205 1.0 11.09041105441754 -6.2842374536002215 24.730038660414856 1.0817865693934845 0.9738770539789067 0.1688151191389845 0.13095992616235969 1228.1621195759005 1332237.5807577 0.020645732261005606 0.04800779903689437 5.197117627304717e-07 6.2842374536002215 -0.10790951541457783 GPSSEGPEEEDGEGFSFKYS(ph)PGKLR ddPTM_A549_PD325901_60min_R1 1 GPSSEGPEEEDGEGFSFKYSPGKLR 25 2 P84157-2;P84157-3;P84157;Q6ZR64 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 GPSSEGPEEEDGEGFS(0.211)FKYS(0.789)PGKLR 127.83 3.6656e-24 13322000.0 3797.8 3921.2 4920.7 4872.1 4774.5 5827.0 4684.7 5279.4 4572.3 4671.6 4901.5 True False 4183.349860207408 4251.6532854525985 5254.648292572882 5173.038551658075 4439.15559113082 5779.546843935694 4862.978822066203 5174.098225390821 4380.142131601557 4376.634378739756 4298.646573168503 0.973178368819442 0.9890678875511122 1.2223959804864155 1.2034109954392143 1.0326868039906683 1.344503844538126 1.1312813787530651 1.2036575087811952 1.0189584226211423 1.0181424093011138 1.0 12.069666784120884 -8.836665435151234 7.888322940162582 1.0085519091875843 1.1406914177923213 0.22245133601247502 0.10407768695122184 0.253889301686586 23.286707130817728 0.01802216428441656 0.01916036566514674 1.4565807458995807e-09 8.836665435151234 0.132139508604737 GPSSVEDIK ddPTM_A549_MK2206_60min_R1 2 GPSSVEDIK 9 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 133.57 0.00012994 35937000.0 13707.400000000001 15619.3 13161.2 12475.5 18832.9 15122.2 13506.8 14028.400000000001 21225.1 20576.6 21317.1 False True 16020.874006245607 16414.255654575667 15027.65606348121 15531.998060046484 16062.605357791772 16722.421166696055 15960.81072514893 16016.968660173196 16417.648739519886 15928.331768930644 16023.475747969967 0.999837629377965 1.0243879613107791 0.937852454726315 0.9693276480300631 1.0024420176020026 1.043620087783678 0.9960891741712794 0.9995939028523448 1.0245997184225062 0.9940622134338502 1.0 13.967899504853111 -6.957419259334191 7.961739429222876 1.0120417496925507 0.9828965429316522 0.2138677890394105 0.023845614102352045 0.2680960695327211 43.47767443473767 0.003439639306366105 0.006504560518217773 1.1030132784730372e-07 6.957419259334191 -0.02914520676089849 GPSSVEDIK ddPTM_A549_PD325901_60min_R1 2 GPSSVEDIK 9 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 137.14 0.00012175 66956000.0 23811.0 24590.0 24540.0 24020.0 29052.0 25943.0 27392.0 27670.0 26424.0 26629.0 30853.0 False True 26228.275191268247 26662.285598612514 26205.431971007878 25503.660846621995 27011.487743959067 25731.728809374246 28434.417549477534 27118.10014330492 25313.49117193525 24947.640395466442 27058.276593281207 0.9693254151220017 0.9853652543870063 0.9684811920916983 0.9425456480459943 0.998270811921046 0.9509744170389495 1.0508584111575692 1.0022109150158724 0.9355174962702835 0.9219966508015203 1.0 14.723782333072851 -5.784069329195766 24.523971304903 0.975403326350518 0.9773453973112429 0.00044549886105615943 0.03546591227088435 4588.097304045513 4972068.736711995 0.004882689205183706 0.015187667199556217 1.6441092426289805e-06 5.784069329195766 0.001942070960724962 GPST(ph)PNVK ddPTM_A549_MK2206_60min_R1 1 GPSTPNVK 8 0 Q9Y4E8-2;Q9Y4E8-3 Q9Y4E8-2 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GPS(0.009)T(0.991)PNVK 74.6 0.0052935000000000005 32550000.0 7457.2 8638.7 8101.8 7483.6 10471.0 9089.2 7872.5 8561.7 10750.0 10541.0 11498.0 True False 8715.793048964399 9078.372931128977 9250.757065853577 9317.082335951574 8930.72977084982 10051.013111077336 9302.831346709427 9775.347194106584 8315.142164222489 8159.780778957557 8642.729271343605 1.0084537852947735 1.0504057973017644 1.070351364183764 1.0780254759157963 1.0333228648571844 1.1629443426399029 1.076376576731901 1.131048640678629 0.962096798726846 0.9441208353028778 1.0 13.07727125497425 -8.77459398721056 24.999940247375292 0.98210125951932 1.0768071010015188 0.5550634594413153 0.042456682466673834 129.91180067931 246892.7009163026 0.007168878522592638 0.007654069369231678 1.6803742306033636e-09 8.77459398721056 0.09470584148219874 GPST(ph)PYTK ddPTM_A549_MK2206_60min_R1 2 GPSTPYTK 8 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 GPS(0.068)T(0.932)PYTK;GPS(0.086)T(0.914)PYTK 142.56 0.0010622 53110000.0 15856.0 16787.199999999997 15507.599999999999 15929.3 23657.0 17464.7 16340.6 15058.0 24299.0 23535.0 21948.9 True False 18532.105158019032 17641.596776071434 17706.810866033593 19831.979215093448 20177.086638238397 19312.802961870406 19309.475503847585 17192.51761319095 18795.31529752951 18218.427154232617 16498.382371177042 1.1232680114381965 1.0692925148159742 1.073245271425379 1.2020559815452123 1.2229736336750272 1.1705876689832455 1.1703859850879423 1.042072927296592 1.1392217051754874 1.1042553593654443 1.0 14.010036957991066 -10.760680453079909 0.5484748177077637 0.9741237840040062 1.139892911150989 0.14118793979051802 0.06140304538062168 1.0402548894911334 0.42064759461270096 0.08964762371777832 0.013060275474328129 1.7350801723878298e-11 10.760680453079909 0.16576912714698278 GPST(ph)PYTK ddPTM_A549_PD325901_60min_R1 2 GPSTPYTK 8 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 GPS(0.065)T(0.935)PYTK;GPS(0.072)T(0.926)PYT(0.003)K 149.27 0.00073125 89787000.0 18153.7 18864.1 20316.0 19878.5 21704.0 21958.0 21366.0 23049.0 22866.0 23095.0 23367.0 True False 19996.65025995239 20453.843910564712 21694.765930032445 21106.349797650935 20179.585914735213 21779.1813281517 22179.09482192383 22589.269613409288 21905.021538656947 21636.777758582637 20493.00713561734 0.9757792073959575 0.9980889468883969 1.0586423840318886 1.0299293636104576 0.9847059429195536 1.0627616134627191 1.082276245508939 1.102291599467049 1.0689022549836278 1.055812727502417 1.0 14.322844079922074 -5.606994323910953 4.699456893362579 1.0410080290360872 0.9805202734035694 0.3266086755210761 0.033396279341100954 0.21541198407605402 8.254583737396533 0.005476770063323117 0.02347688294255902 2.471756449865979e-06 5.606994323910953 -0.06048775563251785 GPSTPKS(ph)PGASNFSTLPK ddPTM_A549_MK2206_60min_R1 2 GPSTPKSPGASNFSTLPK 18 1 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GPS(0.007)T(0.045)PKS(0.812)PGAS(0.132)NFS(0.003)TLPK;GPS(0.034)T(0.028)PKS(0.935)PGAS(0.002)NFSTLPK 165.62 6.5407e-24 125041000.0 14796.8 15359.3 16040.4 14981.8 17553.9 12585.5 14942.1 12777.0 19143.8 22463.6 23677.3 True False 17294.13809297276 16141.022765125455 18315.169917687133 18652.34167255855 14971.744563510725 13917.289256421238 17656.886156324796 14588.178877921418 14807.75986636674 17389.05715835224 17797.572949763766 0.971713285951291 0.9069226916886834 1.0290824467686892 1.0480272633357082 0.8412239469825828 0.7819768063715659 0.992095169727014 0.819672374379286 0.8320100672245475 0.9770465449101053 1.0 14.119392894219898 -6.76220678778811 24.999689216940524 0.9014390490502943 0.9859458656090827 0.2628838400137692 0.07699743834545628 28.60664354175523 931971.3352714631 0.012676701300331248 0.02500159835336075 1.728992909304473e-07 6.76220678778811 0.08450681655878844 GPSTPKS(ph)PGASNFSTLPK ddPTM_A549_PD325901_60min_R1 2 GPSTPKSPGASNFSTLPK 18 1 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 GPS(0.001)T(0.036)PKS(0.963)PGASNFSTLPK;GPS(0.061)T(0.039)PKS(0.9)PGAS(0.001)NFSTLPK 194.97 5.1906e-49 233850000.0 23938.1 22258.1 21881.2 24366.2 28347.0 27639.0 28553.0 27847.0 27465.0 25633.5 28695.0 True False 26368.278289702164 24133.86820180875 23366.18981434466 25871.244834344754 26356.004511841093 27413.91714768124 29639.600039801124 27291.5697394511 26310.741562110277 24014.996435359524 25165.69691259211 1.0477865318527428 0.9589986037594267 0.9284936513183931 1.0280360970810076 1.04729881327679 1.0893366968098623 1.1777778355492479 1.0844750230539124 1.0455002161670803 0.9542750402967457 1.0 14.619170930430906 -6.46183752141132 7.64517504742813 1.045255127890828 0.9764592122687586 0.23503733068953647 0.05959598678933794 0.37668383397262156 42.31724862654999 0.008670279899391932 0.020144200007360374 3.452728889367936e-07 6.46183752141132 -0.06879591562206933 GPSTS(ph)RSPNKR ddPTM_A549_MK2206_60min_R1 1 GPSTSRSPNKR 11 2 O14578-3 O14578-3 CIT Citron Rho-interacting kinase 1 GPST(0.002)S(0.499)RS(0.499)PNKR 83.204 0.00012907 33967000.0 3477.4 3874.5 3573.5 2540.6 3631.3 2238.3 2527.5 2911.6 3671.6 6295.2 7382.9 True False 4064.3001057325546 4071.695500672463 4080.276034316788 3163.0471140518666 3097.140580354023 2475.155420336709 2986.7140335100767 3324.3282164010334 2839.9884623404005 4873.109947793717 5549.522172325858 0.73236937875485 0.7337019970795028 0.7352481722956528 0.5699674703211796 0.5580913967329878 0.4460123490774968 0.5381930084727126 0.5990296305110131 0.5117536923273763 0.8781134296741353 1.0 12.438147841837836 -10.794611422497741 0.9802373932907561 1.0061642709362024 0.5970732571913465 0.6332019269910388 0.0973406526306849 0.2661060127047291 0.44275067928844114 0.07761014632140073 0.018296948590608302 1.604680508797958e-11 10.794611422497741 -0.4090910137448559 GPSTSRS(ph)PNKR ddPTM_A549_MK2206_60min_R1 1 GPSTSRSPNKR 11 2 O14578-3 O14578-3 CIT Citron Rho-interacting kinase 1 GPS(0.041)T(0.3)S(0.3)RS(0.359)PNKR 54.523999999999994 0.0038551 36806000.0 3552.3 3603.3 2980.8 2614.3 3323.2 2580.3 1812.9 2159.5 3754.9 5845.8 5539.9 True False 4151.8413946033725 3786.692579061323 3403.5222619536808 3254.803617360385 2834.3616822164204 2853.34563333548 2142.2804634423032 2465.615738191383 2904.421145343165 4525.229719915574 4164.18993653822 0.9970345872491319 0.9093467485321484 0.8173311769691038 0.7816174734974201 0.6806513932869945 0.6852102514102725 0.5144531099902775 0.5920997302637695 0.6974756650407912 1.0867010844556946 1.0 12.023820158835532 -5.602627485961505 1.926005489409531 0.7821605115460305 1.0034079786351104 0.18178476137220223 0.15813211219950704 0.7111320603446488 4.293330183686787 0.02498062878313643 0.21910239212862642 2.49673537170819e-06 5.602627485961505 0.22124746708907994 GPSTSRS(ph)PNKR ddPTM_A549_PD325901_60min_R1 1 GPSTSRSPNKR 11 2 O14578-3 O14578-3 CIT Citron Rho-interacting kinase 1 GPS(0.004)T(0.047)S(0.043)RS(0.906)PNKR 52.071000000000005 0.004808 57952000.0 993.98 969.23 815.49 755.27 863.15 879.21 797.11 673.4 834.69 848.0 993.26 True False 1094.8881178705988 1050.9104136129815 870.8340553397397 801.9213125573767 802.5253217058463 872.0500052611461 827.4444572453283 659.9685087279197 799.6108820126641 794.4571352794144 871.095316793909 1.256909659324499 1.2064241344803541 0.9997000770763745 0.920589626757346 0.9212830171783767 1.0010959632646756 0.9498896863442695 0.7576306473061438 0.9179372987053296 0.9120209005409837 1.0 9.766686779485374 -5.775326731161625 2.9192364333254033 0.9430629962359948 1.251054508024954 0.7750453723012289 0.06308749753721901 0.09797958198667141 1.6574428124917824 0.009624714179501918 0.042711239685061894 1.6775414846816364e-06 5.775326731161625 0.3079915117889592 GPSYEDLYTQNVVINMDDQEDLHRAS(ph)LEGK ddPTM_A549_PD325901_60min_R1 2 GPSYEDLYTQNVVINMDDQEDLHRASLEGK 30 1 C9IYL4;P29083 C9IYL4 GTF2E1 General transcription factor IIE subunit 1 1 GPSYEDLYTQNVVINMDDQEDLHRAS(1)LEGK;GPSYEDLYTQNVVINMDDQEDLHRAS(1)LEGK 134.78 5.2605e-28 9014500.0 2404.5 2480.7 2371.8 2475.8 3486.3999999999996 2776.5 2712.0 2944.8 2882.9 3066.5 3022.5 True False 2648.6030699006546 2689.7572950174067 2532.7646107920327 2628.724543050239 3241.5272914270554 2753.8891045456403 2815.2066440633434 2886.063653849092 2761.741738554802 2872.8806666678374 2650.7516612061195 0.9991894407398062 1.0147149332704894 0.955489210045274 0.9916902369700457 1.2228709836786924 1.0389087536372956 1.0620408864640285 1.0887717986134933 1.0418711714767654 1.0837984971253953 1.0 11.37218580061276 -6.5754430016512435 24.99994050446024 1.0443655129758966 0.9891680831359974 0.22801234010864802 0.05999631331093048 145.3429246112379 69125.63360351915 0.009031347205972746 0.018800251536503568 2.6580123736383564e-07 6.5754430016512435 -0.05519742983989928 GPT(ph)PKPDLLR ddPTM_A549_MK2206_60min_R1 4 GPTPKPDLLR 10 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 GPT(1)PKPDLLR;GPT(1)PKPDLLR;GPT(1)PKPDLLR;GPT(1)PKPDLLR 50.563 0.010661 41143300.0 8563.9 9416.3 8852.900000000001 9352.8 12132.6 10211.0 10386.7 9801.5 14123.8 13163.0 13574.899999999998 True False 10009.276952747183 9895.549449730837 10108.374340059634 11644.236419863146 10347.910611958032 11291.521242486762 12273.828942377499 11190.892640834849 10924.781851074002 10189.469157899473 10203.87768181965 0.9809287473703072 0.969783229307211 0.9906404854372005 1.1411579776784073 1.01411550928281 1.1065911994030444 1.2028592781199154 1.0967293993315672 1.070650020681725 0.9985879364326518 1.0 13.31682988951291 -6.029739645916432 23.39499081156094 1.0604854282855865 0.9765699118525608 0.31701015966057644 0.06032191994117317 329.49125339051744 259198.42546248346 0.009291017335191802 0.024637576576480087 9.338139427533207e-07 6.029739645916432 -0.08391551643302564 GPTEADELMK ddPTM_A549_MK2206_60min_R1 1 GPTEADELMK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 125.48 3.8086999999999996e-05 5023100.0 4295.7 4593.2 4630.5 4094.2 6003.6 4266.7 4446.2 5072.6 7034.5 6981.7 7078.0 False True 5020.709140218363 4826.974260856566 5287.174528306672 5097.279183795619 5120.478392920828 4718.199361993763 5254.016987454998 5791.656584185975 5441.196981788193 5404.5291209987645 5320.337257137768 0.9436824955941612 0.9072684733248243 0.9937667995038089 0.9580744485619039 0.9624349257279116 0.8868233598657348 0.9875345741299024 1.0885882424870499 1.0227165532576492 1.0158245351360096 1.0 12.377301985985977 -7.993630901676579 24.875867021942533 1.0178758461170856 0.9438355789975336 0.589468092198884 0.03434690255429784 96.49614920040736 376883.3049983978 0.0054101584875001435 0.007465618357221896 1.0147734553227728e-08 7.993630901676579 -0.07404026711955203 GPTEADELMK ddPTM_A549_PD325901_60min_R1 1 GPTEADELMK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 45.973 0.024459 9557100.0 7349.8 6046.9 6663.6 7411.7 7234.6 6856.0 7078.8 6762.7 6881.8 7633.2 5753.4 False True 8095.946285363214 6556.493484597394 7115.831967481994 7869.503875808003 6726.466654015079 6800.167009099557 7348.187607667991 6627.812643264481 6592.581878104149 7151.238449309936 5045.768273807543 1.6045021978890845 1.2994043976676433 1.4102573842758694 1.5596245108318592 1.3330906789620125 1.3476970483165178 1.4563069901192747 1.313538847526806 1.3065566075093216 1.4172744488548625 1.0 12.300858236932472 -10.680565133010347 0.28066742213960466 0.8008535115229374 1.470427371477783 0.0014021398508031746 0.15160102517348673 1.3546389838316921 0.14106741285621316 0.30017149076065025 0.0483163836121612 2.0865791671999334e-11 10.680565133010347 0.6695738599548455 GPTPSS(ph)PLPSVPVSVPASDPR ddPTM_A549_PD325901_60min_R1 2 GPTPSSPLPSVPVSVPASDPR 21 0 Q494U1-3;Q494U1;Q494U1-2;J3KSM5 Q494U1-3 PLEKHN1 Pleckstrin homology domain-containing family N member 1 1 GPT(0.006)PS(0.075)S(0.918)PLPSVPVSVPASDPR;GPT(0.016)PS(0.218)S(0.766)PLPSVPVSVPASDPR 155.22 2.2339e-27 7316400.0 2543.6000000000004 3299.7 3100.7 3003.7 3629.7 3313.3 3234.6000000000004 3740.6 3930.8 4038.2999999999997 3470.6 True False 2801.8243995006474 3577.777299298158 3311.1321480238053 3189.231727102351 3374.76239378522 3286.3175833211126 3357.694473041037 3665.9907985560685 3765.602145725216 3783.3210488194118 3043.738201946057 0.9205208245930158 1.1754550036565745 1.0878505076115896 1.0478009327685511 1.1087558028569993 1.0796978469501612 1.1031482506919443 1.2044369638006862 1.237163611284842 1.2429850393836408 1.0 11.571628559733238 -7.884134554159628 4.444633172677915 1.1232974363623396 1.0764497522060497 0.15041747520761994 0.08805288522852632 0.6398812473965231 22.099684182977626 0.016231284597892852 0.02270515989825014 1.3057662698127958e-08 7.884134554159628 -0.046847684156289926 GPTRPPRPS(ph)TPDLSK ddPTM_A549_MK2206_60min_R1 1 GPTRPPRPSTPDLSK 15 2 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 GPT(0.083)RPPRPS(0.517)T(0.4)PDLSK 62.765 0.00097146 6579600.0 1557.8 1781.4 1370.8 1410.9 1744.5 1256.9 1109.3 1707.2 2342.8 2435.6 2063.6 True False 1820.7185554466491 1872.0656510254034 1565.2000525651197 1756.5705633377086 1487.8863609251757 1389.9043237373053 1310.8454509882208 1949.2008280807286 1812.1595406828314 1885.396268402335 1551.151167537369 1.173785375372053 1.2068879489015394 1.0090570702080925 1.1324302879689454 0.9592142868237443 0.8960469829281297 0.8450791118375257 1.2566156470586354 1.168267528405915 1.2154819645306514 1.0 10.599123575826058 -5.753119664876903 24.938041151187093 1.0568921993408444 1.1903367213408678 0.15252646192623254 0.12413350849383303 262.48786468098723 786777.9815056609 0.017232320286136592 0.06457780602443679 1.7655512761990872e-06 5.753119664876903 0.13344452200002332 GPTRPPRPS(ph)TPDLSK ddPTM_A549_PD325901_60min_R1 1 GPTRPPRPSTPDLSK 15 2 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 GPT(0.016)RPPRPS(0.492)T(0.492)PDLSK 68.567 0.00052751 12890000.0 2701.6 2719.0 2420.9 3112.1 3201.2 3326.4 3111.8 2923.3 2904.4 3038.6 3419.9 True False 2975.864443187197 2948.13967233133 2585.19683205432 3304.3273489080907 2976.3587555404697 3299.310901264407 3230.221251842299 2864.9924882155137 2782.3381683230687 2846.742277429281 2999.27398053228 0.9921949320078693 0.9829511046563759 0.8619408726359592 1.101709070380317 0.9923597426775451 1.1000365163968382 1.077001058525848 0.9552286676081072 0.9276705584027 0.9491437914331757 1.0 11.550397601567274 -4.205911921594499 16.083568782435922 0.9846994555626938 1.0022080222730136 0.0 0.07155430005235539 0.0 0.0 0.009535151117693739 0.0 6.224265054588426e-05 4.205911921594499 0.01750856671031986 GPTRPPRPST(ph)PDLSK ddPTM_A549_PD325901_60min_R1 1 GPTRPPRPSTPDLSK 15 2 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 GPT(0.008)RPPRPS(0.169)T(0.823)PDLSK 67.43 0.0010334 16630000.0 2711.6 2305.3 2173.7 2601.8 3265.5 2297.3 2916.7 2335.6 2710.5 3063.9 2294.3 True False 2986.8796358255845 2499.575721451054 2321.2203535199615 2762.5072768834775 3036.1425453634283 2278.5915504673867 3027.696614579481 2289.014625757246 2596.587111017653 2870.4448311115557 2012.1156447659905 1.4844472998334841 1.2422624554175439 1.1536217411549026 1.3729366321808794 1.50893044008737 1.1324356810179206 1.5047329026317484 1.137615838190781 1.2904760806229092 1.4265804446072925 1.0 10.974497509952547 -10.805673974709997 0.41777761663583546 0.8994429071342993 1.3307076612934186 0.0 0.18462603239971762 1.578282512375279 0.3352416646903808 0.29697603864676686 0.03688207176444709 1.5643215396644482e-11 10.805673974709997 0.43126475415911925 GPTS(ph)SPCEEEGDEGEEDR ddPTM_A549_MK2206_60min_R1 2 GPTSSPCEEEGDEGEEDR 18 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.052)S(0.474)S(0.474)PCEEEGDEGEEDR;GPT(0.055)S(0.516)S(0.429)PCEEEGDEGEEDR 63.727 0.002601 7114400.0 521.8 535.98 286.48 368.32 802.87 389.02 609.38 579.1800000000001 673.79 623.58 702.23 True False 609.8670832148294 563.2590926443228 327.1071717674754 458.55841653451284 684.7688865554578 430.1858381894232 720.096458057516 661.28053866436 521.177640821532 482.71284490488114 527.8469104379562 1.155386289386104 1.0670879785523135 0.6197008361687171 0.8687337321990679 1.2972869084093017 0.8149822035190026 1.3642145929395508 1.2527884990663174 0.9873651441648286 0.9144940234742925 1.0 9.043975760311632 GPTS(ph)SPCEEEGDEGEEDR ddPTM_A549_PD325901_60min_R1 1 GPTSSPCEEEGDEGEEDR 18 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.043)S(0.478)S(0.478)PCEEEGDEGEEDR 54.233999999999995 0.011912 2659400.0 299.42 489.31 166.68 227.77 179.68 136.66 347.46 231.97 244.42 217.74 308.22 True False 329.816897978646 530.5458709335942 177.99190712826388 241.83883559679813 167.05989666234896 135.54708626947857 360.68278043740764 227.34317637305543 234.1478773934459 203.99185924025912 270.31089396756005 1.220139126239682 1.962724709856736 0.6584710831137447 0.8946692160539454 0.6180287231871527 0.5014488475841656 1.3343257282138732 0.8410433373075183 0.8662169472960491 0.7546564485290043 1.0 8.078475845769665 -5.768507457183071 24.999475466794927 0.8887563511897125 1.5914319625067586 0.5393981081437793 0.2669284816204692 78.47057806199726 277551.3309297688 0.033958398108940496 0.10889532251807611 1.704090058477176e-06 5.768507457183071 0.702675611317046 GPTS(ph)SPCEEEGDEGEEDRTSDLR ddPTM_A549_PD325901_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLR 23 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.062)S(0.5)S(0.438)PCEEEGDEGEEDRTSDLR 99.135 3.1622e-08 6345500.0 702.11 964.15 1072.2 1219.3 845.19 777.84 704.45 596.37 836.52 837.59 1009.8 True False 773.387690333936 1045.4023041847195 1144.9659396623742 1294.6133917687844 785.82677014721 771.5055289320301 731.2582302398313 584.4749325067858 801.3639734766605 784.7044244559964 885.6010016496075 0.8732913455307165 1.180443904464257 1.2928688399512287 1.461847253285972 0.8873372643927139 0.8711660527652385 0.8257197415966308 0.6599754645919385 0.9048815120849696 0.8860699378098363 1.0 9.790513043640017 -6.7978827289741455 24.955055596609252 0.9111023001933238 1.2070478336819837 0.5108990420467334 0.15535062035379363 119.96535001192676 82147.50392302412 0.023676373321406565 0.044745095152713917 1.5926387236790702e-07 6.7978827289741455 0.2959455334886598 GPTS(ph)SPCEEEGDEGEEDRTSDLRDEASSVTR ddPTM_A549_MK2206_60min_R1 2 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.083)S(0.482)S(0.435)PCEEEGDEGEEDRTSDLRDEASSVTR;GPT(0.085)S(0.453)S(0.453)PCEEEGDEGEEDRT(0.004)S(0.004)DLRDEASSVTR 93.29 6.491199999999999e-10 46040300.0 1212.0900000000001 1278.02 1282.0 1073.38 1352.8200000000002 1095.38 1108.44 851.5699999999999 1600.52 1479.23 1860.2600000000002 True False 1416.6611592446582 1343.0657591352237 1463.806877289527 1336.3581481858591 1153.8219700698178 1211.292384545604 1309.829200120241 972.28265532375 1238.0047755052449 1145.070915630148 1398.3061014358723 1.013126637858433 0.9604948142299286 1.0468429450364225 0.9556978595842491 0.8251569301492697 0.8662569542547012 0.9367256559741981 0.6953289085453797 0.8853603472329703 0.8188986048579164 1.0 10.44946449851117 -6.522309753077333 24.999092250114195 0.9108529232025819 1.0020357425453517 0.27639939702358884 0.08386223244616456 28.34376517270121 1245294.8608653925 0.01313238894725388 0.027597245266039353 3.0039330347699996e-07 6.522309753077333 0.09118281934276973 GPTSS(ph)PCEEEGDEGEEDR ddPTM_A549_PD325901_60min_R1 1 GPTSSPCEEEGDEGEEDR 18 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.01)S(0.093)S(0.897)PCEEEGDEGEEDR 71.241 0.0010203 1885100.0 323.0 210.0 370.5 142.29 390.32 268.12 332.32 278.17 224.74 231.44 458.53 True False 355.7907222199674 227.69743699506407 395.6443579974907 151.07893013596353 362.9052697308999 265.9365196149027 344.9666194524818 272.6216811298564 215.29495935440232 216.82683890220252 402.13371686115545 0.8847572518839825 0.5662231925548313 0.9838626839989513 0.375693267690176 0.9024492463938308 0.6613136587766464 0.8578405763762114 0.677937884089397 0.5353815169612777 0.5391908954927702 1.0 8.65153149360533 -11.02922215802931 1.3339004419879756 0.999309142424623 0.696085622237843 0.0 0.22010776650758057 0.421738044385509 1.3421035915302364 0.11405627868307307 0.02591882839040501 9.349273011815058e-12 11.02922215802931 -0.30322352018678 GPTSS(ph)PCEEEGDEGEEDRT(ph)SDLRDEASSVTR ddPTM_A549_MK2206_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 GPT(0.115)S(0.431)S(0.455)PCEEEGDEGEEDRT(0.506)S(0.48)DLRDEAS(0.005)S(0.005)VT(0.004)R 40.295 0.037110000000000004 8185300.0 607.24 479.59 1110.6 719.42 649.74 800.43 674.79 642.17 994.55 896.45 1014.1 True False 709.7272664073845 503.9990825054864 1268.0997799670422 895.6779322959912 554.1641067053737 885.1309713175674 797.3906083767614 733.1995640631451 769.286012969998 693.9413223884357 762.2709822638325 0.9310695053609401 0.6611809897428909 1.6635813371787718 1.17501249967034 0.7269909515112171 1.1611762639696173 1.0460723639362852 0.9618620951379396 1.009202804343059 0.9103604079582462 1.0 9.57416014716633 GPTSS(ph)PCEEEGDEGEEDRT(ph)SDLRDEASSVTR ddPTM_A549_PD325901_60min_R1 2 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 GPT(0.068)S(0.454)S(0.478)PCEEEGDEGEEDRT(0.512)S(0.486)DLRDEAS(0.001)S(0.001)VT(0.001)R;GPT(0.1)S(0.429)S(0.471)PCEEEGDEGEEDRT(0.514)S(0.468)DLRDEAS(0.006)S(0.006)VT(0.006)R 72.072 7.2692e-05 26251000.0 1405.06 1344.49 1729.0700000000002 1588.59 1751.29 1453.51 1880.3899999999999 1008.66 1415.3400000000001 1949.69 1614.13 True False 1547.700656849497 1457.7948907880652 1846.4150879425683 1686.713596350342 1628.2854320225124 1441.6730964697051 1951.949270438889 988.5414850215375 1355.8581817774311 1826.5862406638234 1415.6022428131132 1.0933160530841453 1.0298054401857304 1.3043318469694816 1.1915166176894936 1.1502421957079914 1.0184167931274137 1.3788825783151744 0.6983186767612688 0.95779601131674 1.2903244890556225 1.0 10.467200237277337 -8.254056450548827 24.999901731543122 0.9583821051974435 1.1613018152692614 0.21392789214314056 0.16256883941826492 455.17672915992523 1541310.107903654 0.01976188712812469 0.025254489944984245 5.571133294135356e-09 8.254056450548827 0.20291971007181786 GPTSS(ph)PCEEEGDEGEEDRTS(ph)DLRDEASSVTR ddPTM_A549_MK2206_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 GPT(0.07)S(0.452)S(0.477)PCEEEGDEGEEDRT(0.142)S(0.807)DLRDEAS(0.018)S(0.017)VT(0.016)R 56.952 0.0029404 5882100.0 332.66 550.48 310.05 379.82 531.02 435.04 300.48 420.32 645.6 617.28 600.79 True False 388.80487524385796 578.4970807098154 354.0197521869094 472.87591705076744 452.90766143794036 481.0756440438195 355.07332652388084 479.9016471760142 499.37263081135234 477.83601928042094 451.5972620395307 0.8609548992567272 1.28100218787238 0.7839280304492195 1.0471186537206556 1.0029016991655166 1.065275820918747 0.7862610258536054 1.0626761663891706 1.1057919805714846 1.0581021176310708 1.0 8.818892929087664 GPTSS(ph)PCEEEGDEGEEDRTSDLR ddPTM_A549_MK2206_60min_R1 2 GPTSSPCEEEGDEGEEDRTSDLR 23 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.03)S(0.154)S(0.816)PCEEEGDEGEEDRTSDLR;GPT(0.033)S(0.23)S(0.737)PCEEEGDEGEEDRTSDLR 87.95200000000001 3.5341e-07 10323100.0 1225.44 1226.1999999999998 1023.51 907.6600000000001 1376.3000000000002 1173.29 1057.22 1340.83 1556.1 1235.35 1455.73 True False 1432.2643128684945 1288.608342476339 1168.6591084045265 1130.0367407464053 1173.8480931735855 1297.4467690331305 1249.3031891226606 1530.8967586196588 1203.6458345810806 956.283577012164 1094.2320648958964 1.3089218994919125 1.1776371610888 1.0680176042142495 1.0327212818918035 1.0727597287923232 1.185714448202144 1.1417168525778099 1.3990604075062505 1.0999913758655882 0.8739312324055714 1.0 10.095703022216567 -9.505939954374055 1.6889403854796785 1.0272438161236874 1.162000474518628 0.330611285663557 0.11289201933730798 0.3530850776803056 2.0437861331844793 0.0246739745110744 0.02001653190592705 3.11932083208836e-10 9.505939954374055 0.13475665839494066 GPTSS(ph)PCEEEGDEGEEDRTSDLR ddPTM_A549_PD325901_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLR 23 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.027)S(0.272)S(0.701)PCEEEGDEGEEDRTSDLR 96.79299999999999 9.9019e-08 6188200.0 671.03 615.15 663.91 634.13 481.91 904.65 595.55 550.58 516.57 555.86 568.31 True False 739.1524716138233 666.9908493691125 708.9669250151524 673.2987698862786 448.06230409924626 897.2828303357513 618.2139811474643 539.5982499783457 494.86035932056416 520.762904736339 498.41147281391255 1.483016567497422 1.338233338818308 1.4224530607461618 1.3508893888116058 0.898980718821726 1.8002852648433352 1.2403686810361232 1.0826360936916288 0.9928751369359544 1.0448453399281432 1.0 8.961193467569293 -8.241642053263424 3.198269527100633 0.9997532872630368 1.3675073594053393 0.40056751777971045 0.1989042275644731 0.17293164262049604 3.6482375191897827 0.030641965735592122 0.0391229394135597 5.732683256962746e-09 8.241642053263424 0.3677540721423025 GPTSS(ph)PCEEEGDEGEEDRTSDLRDEAS(ph)SVTR ddPTM_A549_MK2206_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 GPT(0.051)S(0.318)S(0.628)PCEEEGDEGEEDRT(0.004)S(0.004)DLRDEAS(0.39)S(0.366)VT(0.24)R 58.43600000000001 0.00077787 4448000.0 324.12 402.82 386.74 280.66 467.27 583.99 464.2 449.34 468.51 703.03 453.62 True False 378.82353202681225 423.3218174166686 441.5855473657968 349.42171259930626 398.5352019888261 645.7874341788114 548.5391312978747 513.0353210460366 362.3932330567327 544.2150347244598 340.97363472489883 1.1110053489398122 1.2415089446965868 1.2950724114551342 1.0247763375641152 1.1688153024217505 1.893951227929513 1.608743537430517 1.5046187411526966 1.0628189283582452 1.5960619218067646 1.0 8.413516379105753 -8.848913907346715 6.941104648287599 1.0279669343456226 1.3588831695001067 0.0 0.28937428486247974 0.2214257131003235 14.809599241567263 0.0440214856885541 0.04676327996392534 1.416074468591905e-09 8.848913907346715 0.3309162351544841 GPTSS(ph)PCEEEGDEGEEDRTSDLRDEAS(ph)SVTR ddPTM_A549_PD325901_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 GPT(0.253)S(0.253)S(0.492)PCEEEGDEGEEDRT(0.002)S(0.002)DLRDEAS(0.378)S(0.355)VT(0.266)R 58.131 0.00084899 2501400.0 203.65 282.16 261.87 234.96 281.8 354.13 345.22 154.81 260.17 293.64 161.73 True False 224.3243980807937 305.9386134406061 279.6420729522344 249.47294556712342 262.00734015722367 351.2460826914273 358.35753601163265 151.72219310390443 249.23595966554632 275.09952028708415 141.8382352909399 1.5815509662867522 2.1569544545803323 1.9715563464155486 1.7588553964690987 1.8472264521607433 2.4763850309540874 2.5265228044932053 1.0696847207150488 1.75718457829309 1.9395300549446166 1.0 7.148102681653804 -10.074016563606662 0.47803208176735573 0.9338731104756061 1.9964804990008331 0.02360508414570439 0.45973040919034597 0.7821168281353017 0.3291962997875256 0.36711212894656675 0.10756349349385387 8.433025943373352e-11 10.074016563606662 1.062607388525227 GPTSS(ph)PCEEEGDEGEEDRTSDLRDEASSVTR ddPTM_A549_MK2206_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.034)S(0.153)S(0.813)PCEEEGDEGEEDRTSDLRDEASSVTR 97.07700000000001 2.9483e-10 47712000.0 659.68 978.65 944.73 644.91 973.2 548.45 648.99 567.77 1024.1 1038.1 970.7 True False 771.0178563724774 1028.4591048478794 1078.7069197985443 802.9129789511095 830.0435691902449 606.4866149683545 766.9030823373715 648.2531362227008 792.1429851516516 803.5924890082383 729.6484000428972 1.0566977962634443 1.4095269787303237 1.4783927707305675 1.1004107990970788 1.1375939002147408 0.8312039263468517 1.051058403324511 0.8884459092688877 1.0856502736181979 1.1013420833390355 1.0 9.511057621286565 -6.482582918212566 3.566490888380276 1.0212572075120496 1.3239495182064014 0.5026574977957446 0.1296432955060513 0.13685336162267234 3.564791266705104 0.017361044081700434 0.04129580014087422 3.2916760060110345e-07 6.482582918212566 0.30269231069435176 GPTSS(ph)PCEEEGDEGEEDRTSDLRDEASSVTR ddPTM_A549_PD325901_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.025)S(0.142)S(0.834)PCEEEGDEGEEDRTSDLRDEASSVTR 150.07 3.4551e-37 64740000.0 632.71 588.41 848.02 753.16 589.21 710.73 849.61 677.21 585.24 1010.8 1005.6 True False 696.9422534235161 637.9973757250748 905.5717367585215 799.6809826495349 547.8259222641514 704.9420505217802 881.9423734744311 663.7025152890321 560.6443980269217 946.9779154957926 881.9175750236149 0.7902578122505999 0.7234206390636805 1.0268212839893494 0.9067525189393375 0.6211758760442918 0.7993287246859823 1.0000281187851547 0.7525675120730646 0.6357106535856364 1.0737714524743829 1.0 9.78450001600942 -11.132444720611899 1.5154523895172454 0.9993521228770904 0.7872438542740134 0.30561285401957805 0.12798034724252358 0.46307125596931953 1.9141074648304264 0.09714052696172912 0.021167492053057426 7.371489977417527e-12 11.132444720611899 -0.21210826860307697 GPTSSPCEEEGDEGEEDRT(ph)SDLRDEASSVTR ddPTM_A549_MK2206_60min_R1 2 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPTSSPCEEEGDEGEEDRT(0.499)S(0.499)DLRDEASSVTR;GPTSS(0.001)PCEEEGDEGEEDRT(0.493)S(0.493)DLRDEAS(0.004)S(0.004)VT(0.004)R 61.013999999999996 0.00043754 16400300.0 424.74 798.0 630.6 325.15 997.9 683.3 609.49 511.81 653.94 903.45 710.3199999999999 True False 496.425728103999 838.6147914664151 720.0285622611351 404.8117645965383 851.1102319101367 755.6063524621691 720.2264436336525 584.3606348523879 505.82363412759565 699.3600175267248 533.9279401653145 0.9297616602538087 1.5706516336394827 1.3485500722030024 0.7581767765725104 1.5940544929089429 1.4151841393207831 1.348920686583018 1.0944559947011923 0.9473631104058402 1.3098397085385518 1.0 9.060501236217203 -8.462625352686239 3.6944264864137444 0.9759953839962171 1.2907972280576243 0.07323969037738853 0.2558956883538774 0.22722918031420766 6.176088431024047 0.03775510681082791 0.045176865632760195 3.446471149172963e-09 8.462625352686239 0.3148018440614072 GPTSSPCEEEGDEGEEDRT(ph)SDLRDEASSVTR ddPTM_A549_PD325901_60min_R1 5 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPT(0.019)S(0.085)S(0.079)PCEEEGDEGEEDRT(0.401)S(0.401)DLRDEAS(0.005)S(0.005)VT(0.005)R;GPTSSPCEEEGDEGEEDRT(0.5)S(0.5)DLRDEASSVTR;GPT(0.004)S(0.017)S(0.077)PCEEEGDEGEEDRT(0.449)S(0.449)DLRDEAS(0.001)S(0.001)VT(0.001)R;GPTSSPCEEEGDEGEEDRT(0.5)S(0.5)DLRDEASSVTR;GPTSSPCEEEGDEGEEDRT(0.459)S(0.459)DLRDEAS(0.027)S(0.027)VT(0.027)R 103.99 1.0412000000000001e-14 49131700.0 2098.81 1656.1299999999999 2085.76 1847.8999999999999 2133.82 1940.6699999999998 2011.33 2100.0499999999997 1580.77 2157.07 1988.5900000000001 True False 2311.8796461377387 1795.69788728874 2227.3122162937816 1962.0405861146035 1983.9478444793726 1924.865826947088 2087.872263792006 2058.162855292645 1514.3357341757521 2020.8722320721313 1744.0060367106291 1.3256144746483656 1.029639719983772 1.2771241437298673 1.1250193776939037 1.13758083556941 1.1037036492015697 1.1971703192782195 1.180135166948474 0.8683087686049193 1.1587530028758959 1.0 10.768189318536912 -8.752762942644601 24.999062223653365 0.9378124728552484 1.1666067285014439 0.2593175583763335 0.10506114516465252 86.92505762301852 250453.3702703981 0.013740053013599696 0.015462421676161426 1.7670020662686256e-09 8.752762942644601 0.2287942556461955 GPTSSPCEEEGDEGEEDRTS(ph)DLRDEASSVTR ddPTM_A549_MK2206_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPTSSPCEEEGDEGEEDRT(0.168)S(0.691)DLRDEAS(0.043)S(0.049)VT(0.049)R 52.465 0.0022533 3659800.0 245.37 250.46 300.41 176.06 505.0 318.5 335.61 227.29 479.97 422.92 227.18 True False 286.7824572794609 263.20734419884496 343.0126552313156 219.19470790363374 430.7151689694549 352.2034585968107 396.5859927937952 259.50905354643186 371.2575613545924 327.3820782693034 170.76493615096882 1.679398966459508 1.541343030551367 2.008683181470387 1.2836048948002383 2.5222693761245627 2.062504554713954 2.3224088137343597 1.5196858289280575 2.1740854400365497 1.917150473911538 1.0 7.41586796078515 -10.866237303731038 1.0148076791482752 0.978248383443737 1.9193748555500767 0.0 0.4429482508582528 0.38929183247345367 0.6839884334537331 0.2728839988373987 0.060150554724686375 1.3607009759119776e-11 10.866237303731038 0.9411264721063397 GPTSSPCEEEGDEGEEDRTSDLRDEAS(ph)SVTR ddPTM_A549_MK2206_60min_R1 2 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPTSSPCEEEGDEGEEDRTSDLRDEAS(0.493)S(0.493)VT(0.014)R;GPTSSPCEEEGDEGEEDRT(0.002)S(0.002)DLRDEAS(0.447)S(0.447)VT(0.1)R 175.02 1.6736e-58 67667000.0 893.6600000000001 1752.98 1258.87 1056.21 2437.82 2008.55 1841.5 1289.07 2011.1599999999999 1773.6100000000001 1892.31 True False 1044.4879601107023 1842.1991944170384 1437.3966954863233 1314.981497415068 2079.2199073606257 2221.0934278324144 2176.076713237907 1471.799620111307 1555.6354711625772 1372.9502691743578 1422.3972019008704 0.7343152522480108 1.295136964523799 1.0105452215213921 0.9244826238815333 1.4617716518156723 1.561514199313791 1.5298657156593323 1.0347318021607579 1.0936716334112926 0.9652369024204825 1.0 10.47410867591674 -4.1053042097255155 16.3229323913907 1.1200180569654405 1.1058151360038868 0.0 0.2621017460962832 0.0 0.0 0.034878396212636824 0.0 7.846857941592948e-05 4.1053042097255155 -0.014202920961553733 GPTSSPCEEEGDEGEEDRTSDLRDEAS(ph)SVTR ddPTM_A549_PD325901_60min_R1 4 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPTSSPCEEEGDEGEEDRT(0.003)S(0.003)DLRDEAS(0.45)S(0.45)VT(0.094)R;GPTSSPCEEEGDEGEEDRT(0.112)S(0.112)DLRDEAS(0.259)S(0.259)VT(0.259)R;GPTSSPCEEEGDEGEEDRTSDLRDEAS(0.596)S(0.404)VTR;GPTSSPCEEEGDEGEEDRT(0.005)S(0.005)DLRDEAS(0.758)S(0.116)VT(0.116)R 208.33 7.256799999999998e-91 82967500.0 2961.16 2918.86 2401.36 2493.87 2912.37 2540.44 2566.13 2629.7400000000002 2196.32 2560.84 2623.0699999999997 True False 3261.7747833092235 3164.842575940062 2564.3307301507543 2647.910685910292 2707.8151783310627 2519.751498920197 2663.7854813902177 2577.28777270888 2104.016308308538 2399.148125364313 2300.449019010733 1.4178861415115782 1.3757499295946345 1.1147087846587007 1.151040802916371 1.17708115065967 1.0953302933893188 1.1579415407065752 1.1203411818346647 0.9146111437032987 1.0429042789203056 1.0 11.167699769429534 -2.000000000000006 0.23348851155501357 0.945676420958926 3.769527270884637 0.7238203609382271 0.07387998380319778 15.648976477802345 0.185916349722429 0.044479913149903634 17.230338023036534 0.009999999999999856 2.000000000000006 2.823850849925711 GPTSSPCEEEGDEGEEDRTSDLRDEASSVT(ph)R ddPTM_A549_MK2206_60min_R1 1 GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR 31 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPTSSPCEEEGDEGEEDRT(0.04)S(0.04)DLRDEAS(0.261)S(0.261)VT(0.398)R 96.024 3.5813e-09 5320600.0 228.74 566.2 470.86 278.6 309.67 698.26 613.51 597.97 628.9 501.74 724.75 True False 267.345719843925 595.0171615642666 537.635028268757 346.85701250682905 264.11795321736855 772.1494097325249 724.9768255979301 682.7340787063217 486.45515414693244 388.39658552643635 544.7745729175751 0.49074559117570016 1.0922263834334522 0.9868944972769528 0.6366982413463501 0.4848206328773164 1.4173741729486917 1.330783156260892 1.2532414555435207 0.8929476123338332 0.7129491808811002 1.0 9.089515557622143 -7.247611765478401 24.978007342835213 1.0346099677327605 0.7661097601389747 0.30947399676145804 0.2582375359178652 1023.5579339141784 1848940.8479079718 0.03846143732677901 0.06638409282220871 5.654422220763035e-08 7.247611765478401 -0.2685002075937858 GPTSTSIDNIDGT(ph)PVRDER ddPTM_A549_MK2206_60min_R1 4 GPTSTSIDNIDGTPVRDER 19 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER;GPT(0.002)S(0.002)T(0.001)S(0.003)IDNIDGT(0.993)PVRDER;GPTSTSIDNIDGT(1)PVRDER 172.93 1.3283e-33 373020000.0 6889.200000000001 7167.4 6454.49 5808.3 7644.4 7135.299999999999 5954.38 6044.0 9989.1 10095.0 9710.3 True False 8051.928535231132 7532.1900455593795 7369.83373743875 7231.333760744497 6519.918886475451 7890.352709971189 7036.213771256869 6900.755508973706 7726.584799314872 7814.532488718011 7298.964519353606 1.1031603885566232 1.0319532346797087 1.0097094893251268 0.990734198196226 0.8932662803316178 1.0810235738301623 0.9640016405888755 0.9454430817790623 1.058586430832402 1.0706357686761387 1.0 12.833476092660954 -12.680754375297264 13.611099863919446 1.017477749367737 1.0151259252289044 0.0 0.060691571513036384 0.0 0.0 0.0 0.007504212057342783 2.085670145761741e-13 12.680754375297264 -0.0023518241388325034 GPTSTSIDNIDGT(ph)PVRDER ddPTM_A549_PD325901_60min_R1 4 GPTSTSIDNIDGTPVRDER 19 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER 253.73 1.3541999999999999e-96 517312000.0 19135.4 22456.3 21292.600000000002 22042.0 25387.500000000004 24234.6 21707.5 22229.2 21720.1 23092.100000000002 23431.0 True False 21078.011721263047 24348.77121139169 22737.64387880533 23403.484278985925 23604.36958212036 24037.241452556034 22533.590791299783 21785.821167529943 20807.279730682352 21634.06086507756 20549.135541346775 1.0257371498111014 1.1849048911278868 1.1065012361739048 1.1389035919246302 1.1486794436985521 1.1697446544255288 1.096571227824163 1.0601818808238839 1.0125622894849355 1.052796640595796 1.0 14.32679008360511 -8.416942813754089 1.7700863867017493 1.0050464017513812 1.1316295462403219 0.5398019035351489 0.041924024028168014 0.13552943590548447 0.8273835938417247 0.006422027801133733 0.007838819125874969 3.828751555422501e-09 8.416942813754089 0.1265831444889407 GPTTGEGALDLSDVHS(ph)PPKSPEGK ddPTM_A549_PD325901_60min_R1 2 GPTTGEGALDLSDVHSPPKSPEGK 24 1 O95684;O95684-2 O95684 FGFR1OP FGFR1 oncogene partner 1 GPTTGEGALDLS(0.001)DVHS(0.593)PPKS(0.406)PEGK;GPTTGEGALDLSDVHS(0.592)PPKS(0.408)PEGK 149.66 1.975e-28 10686100.0 3402.8 3586.4 3356.8 4232.9 4532.1 4357.5 3970.7 4687.2 4162.3 4239.2 5659.799999999999 True False 3748.2497509910368 3888.638514471894 3584.612634078208 4494.356619386602 4213.780930896217 4322.01396472452 4121.807161350411 4593.710118962732 3987.3730057881526 3971.5361885336 4963.680480428253 0.7551351795850583 0.7834183787221519 0.7221682878687101 0.905448414157158 0.8489226789498472 0.8707276751124858 0.8303933296276138 0.9254645090625171 0.8033097661121276 0.8001192268908789 1.0 12.277194534671462 -14.999999999999998 0.19444396444323128 1.7766363231159645 0.7908878094602433 0.0 0.0793376874825567 26.149287419594977 0.30323674194133166 7.786617879670264 0.052775550484803216 1.000000000000004e-15 14.999999999999998 -0.9857485136557212 GPVGT(ph)VSEAQLAR ddPTM_A549_MK2206_60min_R1 2 GPVGTVSEAQLAR 13 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;Q9NZM1-7;Q9NZM1-8 Q9NZM1-5 MYOF Myoferlin 1 GPVGT(1)VSEAQLAR;GPVGT(0.987)VS(0.013)EAQLAR 135.81 2.1283e-08 18539700.0 2129.15 2736.3999999999996 2780.2 2412.8 3702.9 2352.8 2123.93 2603.3999999999996 3913.8999999999996 3777.1 3666.1 True False 2488.498467280287 2875.671071890599 3174.4741655540874 3003.936108314708 3158.2083152019677 2601.7717343377585 2509.8205884047716 2972.439922578121 3027.4078992139907 2923.8504866901235 2755.7061907873353 0.9030347558820471 1.0435332625460294 1.1519639416447025 1.0900785135792908 1.1460613347534097 0.9441397428491475 0.9107721994439794 1.0786490709769252 1.0985960365930838 1.0610167718405232 1.0 11.428206362947455 -7.248257089517448 24.805649266252264 1.0326006839774364 1.0716439392246007 0.06863483514681035 0.08121911661252022 2103.346519389437 3957946.5247826776 0.01282577181901538 0.022138302950873448 5.646026477598921e-08 7.248257089517448 0.03904325524716423 GPVGT(ph)VSEAQLAR ddPTM_A549_PD325901_60min_R1 1 GPVGTVSEAQLAR 13 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;Q9NZM1-7;Q9NZM1-8 Q9NZM1-5 MYOF Myoferlin 1 GPVGT(1)VSEAQLAR 98.368 0.00017008 17557000.0 2483.3 2798.0 2521.1 3131.6 3626.2 3233.4 2779.1 3034.1 3395.5 3351.7 3768.3 True False 2735.402787891162 3033.7972795818555 2692.1970066058675 3325.031819620377 3371.5082217108734 3207.0682624303545 2884.8601712818718 2973.5824952945964 3252.7989431693204 3140.0730899952982 3304.8229892218424 0.8277002419833818 0.9179908544197695 0.8146266881421614 1.0061149509260987 1.0201781555945701 0.9704205861825884 0.8729242627185744 0.899770579239029 0.984258144468799 0.9501486464588724 1.0 11.690357285771526 -2.0000000000000004 0.25329889723912913 0.9933888111450109 0.004547704719056538 0.26937083331841016 0.058653974926410196 36.267136773104866 0.44197320847209964 0.027269144591995784 15.596553118110247 0.00999999999999999 2.0000000000000004 -0.9888411064259544 GPVGTVS(ph)EAQLAR ddPTM_A549_MK2206_60min_R1 2 GPVGTVSEAQLAR 13 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;Q9NZM1-7;Q9NZM1-8 Q9NZM1-5 MYOF Myoferlin 1 GPVGT(0.079)VS(0.921)EAQLAR;GPVGT(0.092)VS(0.908)EAQLAR 183.0 4.1005e-25 132339000.0 18179.2 20012.0 18304.6 17641.6 25198.3 18467.4 18249.5 19920.8 26554.0 26460.0 27006.0 True False 21247.404521232325 21030.525321836987 20900.467524207386 21963.792791961525 21491.663449986154 20421.608010332002 21565.197924645756 22744.63440489137 20539.561398024554 20482.667622731897 20299.664872317382 1.0466874529641803 1.036003572182922 1.0295966783525239 1.081978098166217 1.0587201111528841 1.0060071503042847 1.0623425588692441 1.1204438372728107 1.0118177579391627 1.0090150626409637 1.0 14.309168289667452 -8.967735395879847 24.99998897653295 1.0052136667395533 1.054132764275024 0.3726118636909006 0.027968802313972068 134.13381662538353 103933.38534476388 0.004881651893713965 0.005159494588392145 1.07712127520115e-09 8.967735395879847 0.048919097535470746 GPVGTVS(ph)EAQLAR ddPTM_A549_PD325901_60min_R1 3 GPVGTVSEAQLAR 13 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;Q9NZM1-7;Q9NZM1-8 Q9NZM1-5 MYOF Myoferlin 1 GPVGT(0.45)VS(0.55)EAQLAR;GPVGT(0.475)VS(0.525)EAQLAR;GPVGT(0.039)VS(0.961)EAQLAR 221.69 5.775499999999999e-46 178749000.0 38660.9 42191.6 39536.7 42199.8 47916.1 43788.4 43102.6 45075.6 42798.5 44772.5 49119.2 True False 42585.72610734966 45747.23420343307 42219.89821549094 44806.385803300545 44550.638437571135 43431.80178839773 44742.893029647705 44176.53179687586 40999.82788079286 41945.55670907737 43077.849792263245 0.9885759459377202 1.0619665193142775 0.9800836954279367 1.0401258655985133 1.034189000899771 1.0082165660041382 1.0386519579183708 1.0255045692835378 0.9517612433886243 0.9737151903206358 1.0 15.39465861988057 -8.742131719480696 24.90935469558073 0.9772205875744496 1.023172541721955 0.42047697924455907 0.02452350363094744 168.23647918140495 217046.3716581379 0.004337532531714431 0.004914716060363752 1.8107908049621884e-09 8.742131719480696 0.045951954147505414 GPVRS(ph)EDESVEAK ddPTM_A549_MK2206_60min_R1 2 GPVRSEDESVEAK 13 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GPVRS(0.999)EDES(0.001)VEAK;GPVRS(0.998)EDES(0.002)VEAK 137.46 1.0909e-08 13082600.0 5138.8 5127.5 4292.7 3559.2 5301.5 5432.1 4681.9 4601.7 5967.7 5797.4 6459.2 True False 6006.103808402389 5388.467848676747 4901.469408846137 4431.204159778561 4521.656372854583 6006.9212164638475 5532.540626504782 5254.005067115206 4616.025478458658 4487.763313530833 4855.202375148949 1.2370449971651558 1.1098338302554152 1.0095293728504509 0.9126713610249089 0.9313013183545964 1.2372133543206973 1.1395077277978662 1.0821392521159372 0.9507380170362202 0.9243205466575751 1.0 12.245315716153893 -5.458916289173352 2.4131634235753214 1.0058707672544165 1.2471409009677543 0.3022815898138096 0.09602482191523298 0.3438878089669516 3.165354812322514 0.014113745009411479 0.14237416189799307 3.4760315594709512e-06 5.458916289173352 0.24127013371333783 GPVRS(ph)EDESVEAK ddPTM_A549_PD325901_60min_R1 1 GPVRSEDESVEAK 13 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GPVRS(0.991)EDES(0.009)VEAK 121.99 6.7444e-06 6630000.0 3315.5 3623.8 3693.4 3430.7 4167.7 3666.4 3785.4 3811.9 3883.8 4143.0 4054.0 True False 3652.087119257903 3929.190343727205 3944.0563342184396 3642.6065473149906 3874.9751297844605 3636.542053991046 3929.455468450363 3735.8686641223003 3720.577392278312 3881.4102729511987 3555.38370042336 1.0271991511979504 1.1051382002058832 1.1093194621297269 1.0245326114537918 1.0898894342467298 1.0228268902616677 1.1052127701385535 1.050763849673229 1.0464629715873652 1.0916994057460006 1.0 11.795789549943173 -9.980159394227837 0.39799075821479096 0.9903258522216887 1.0737942625659196 0.0 0.04155713942846021 1.0551058363576862 0.3150729778001865 0.03576085023853866 0.010781795331192376 1.046744302733034e-10 9.980159394227837 0.08346841034423091 GPVS(ph)PSVSFQPLAR ddPTM_A549_MK2206_60min_R1 4 GPVSPSVSFQPLAR 14 0 Q7Z434-4;Q7Z434 Q7Z434-4 MAVS Mitochondrial antiviral-signaling protein 1 GPVS(0.99)PS(0.009)VSFQPLAR;GPVS(0.996)PS(0.004)VSFQPLAR;GPVS(0.99)PS(0.01)VSFQPLAR;GPVS(0.959)PS(0.041)VSFQPLAR 273.07 3.2911999999999996e-84 173504000.0 20613.4 20275.3 17994.800000000003 17717.9 22494.3 15817.399999999998 16236.300000000001 16168.599999999999 24376.899999999998 22528.5 23640.699999999997 True False 24092.43797075616 21307.226167191748 20546.73322577971 22058.78629538675 19185.41826801903 17491.186769259642 19186.22554392866 18460.548564260815 18855.57107191024 17439.29620327723 17770.061739872377 1.3557880846692651 1.1990518929589704 1.1562555902480096 1.2413455067458408 1.0796483742637137 0.9843064714858589 1.0796938032510435 1.0388567487550775 1.0610864130878173 0.9813863597416222 1.0 14.117161073389477 -2.0000000000000004 0.30179996390848224 1.0165310338418738 3.8444208516227603 0.8125814612477502 0.0490783075527838 14.466011716949803 0.1809064103790969 0.015959137434462343 22.50782842382894 0.00999999999999999 2.0000000000000004 2.8278898177808864 GPVS(ph)PSVSFQPLAR ddPTM_A549_PD325901_60min_R1 2 GPVSPSVSFQPLAR 14 0 Q7Z434-4;Q7Z434 Q7Z434-4 MAVS Mitochondrial antiviral-signaling protein 1 GPVS(0.935)PS(0.065)VSFQPLAR;GPVS(0.871)PS(0.123)VS(0.006)FQPLAR 253.97 1.1069999999999998e-69 231890000.0 22729.5 23193.7 24474.6 22579.9 27384.0 23941.0 23880.0 24065.6 25996.4 29793.0 31716.0 True False 25036.982107426466 25148.314497297222 26135.593533725732 23974.609140326396 25460.64230967146 23746.03243361325 24788.766467637404 23585.592728902033 24903.861712916205 27911.8648954948 27815.133064288948 0.9001208820234166 0.904123465423375 0.9396177783265928 0.8619268182148915 0.9153521664205033 0.8537091078704959 0.8911971195803119 0.8479410353489518 0.8953349838505558 1.0034776691875706 1.0 14.763582386839001 -10.43396078241376 0.8134289393127102 0.9991141946101358 0.8899040966255429 0.7226315551220397 0.026464213748091193 0.2620906932509875 0.3177000695939024 0.01667137877930281 0.005101519851297006 3.6816221786331324e-11 10.43396078241376 -0.10921009798459291 GPVSGS(ph)PDSMNASR ddPTM_A549_MK2206_60min_R1 3 GPVSGSPDSMNASR 14 0 A0A499FJS7;O14920-4;O14920-2;O14920 A0A499FJS7 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta 1 GPVS(0.027)GS(0.968)PDS(0.006)MNASR;GPVS(0.005)GS(0.974)PDS(0.021)MNASR;GPVS(0.048)GS(0.815)PDS(0.137)MNASR 139.77 7.5422e-10 26660100.0 7259.5 8245.6 7545.9 6679.2 9928.4 7208.5 7391.5 6718.5 9613.8 10532.599999999999 10878.3 True False 8484.726122265343 8665.265820194829 8616.02208684792 8315.604299840681 8467.945512071954 7971.2986853849625 8734.439872874276 7670.867949543327 7436.289650083923 8153.278344791611 8176.917884193517 1.0376435525501408 1.0597227394132596 1.0537004539941899 1.0169607201162254 1.0355913599720759 0.974853703837967 1.0681824125638444 0.938112386376239 0.9094245234452857 0.997108991463935 1.0 12.99734143698545 -8.269483646754155 24.690400829360613 0.9545994633336856 1.0338766851138683 0.5303263871797855 0.03331085699325534 333.6630041433268 1024115.5821855749 0.006488422532806718 0.007914085360539388 5.376706785907469e-09 8.269483646754155 0.0792772217801827 GPVSGS(ph)PDSMNASR ddPTM_A549_PD325901_60min_R1 2 GPVSGSPDSMNASR 14 0 A0A499FJS7;O14920-4;O14920-2;O14920 A0A499FJS7 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta 1 GPVS(0.059)GS(0.898)PDS(0.043)MNASR;GPVS(0.065)GS(0.935)PDSMNASR 134.04 2.2148000000000003e-09 37259000.0 5458.5 5320.2 5076.4 5804.8 6311.4 5963.9 6265.799999999999 6278.2 6000.0 5387.8 7278.7 True False 6012.642901664687 5768.551925243523 5420.915030873043 6163.349312342691 5868.1090371479795 5915.331975724739 6504.248447777318 6152.976375847375 5747.840865562044 5047.613388512302 6383.466043480891 0.941908809525993 0.903670809236097 0.8492118535523734 0.9655176780703651 0.9192668993893656 0.9266645949759169 1.0189211321049911 0.9638927087473264 0.9004263242587499 0.7907323943028055 1.0 12.640124264442997 -6.77296551751805 1.3849195739994633 0.9562253937818809 0.903153093664841 0.0 0.06361923776740042 0.56112402997247 2.1476425810284723 0.007302121047314621 0.019462727892084676 1.6866869410738841e-07 6.77296551751805 -0.053072300117039894 GPVSGSPDS(ph)MNASR ddPTM_A549_MK2206_60min_R1 1 GPVSGSPDSMNASR 14 0 A0A499FJS7;O14920-4;O14920-2;O14920 A0A499FJS7 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta 1 GPVS(0.002)GS(0.038)PDS(0.961)MNASR 90.15 2.483e-05 16406000.0 1154.3 1133.8 1061.3 1027.9 1611.6 1475.6 1282.8 1148.8 1818.6 2254.0 2286.4 True False 1349.1176200745058 1191.5055771486493 1211.8082986484987 1279.7355461441853 1374.5357748736103 1631.7470125759933 1515.8681551678444 1311.645918052449 1406.6900037074433 1744.8198345290136 1718.6237785701878 0.784998809452588 0.6932905223387078 0.705103882396335 0.7446280926060872 0.7997886401974246 0.949449805665745 0.8820244279576847 0.7631954907220445 0.8184979291266071 1.0152424610234474 1.0 10.7470380457692 -14.999999999998582 0.09526069019540462 1.6813252283918874 0.6292619139661686 0.6698322762378421 0.0622822470251544 59.063721006137534 0.40753950114059573 8.13284064237027 0.5599316270279885 1.000000000003264e-15 14.999999999998582 -1.0520633144257188 GQAGASRPHAPGT(ph)PAGR ddPTM_A549_MK2206_60min_R1 2 GQAGASRPHAPGTPAGR 17 1 Q8TDD1-2 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 GQAGASRPHAPGT(1)PAGR;GQAGASRPHAPGT(1)PAGR 60.032 0.0020985 5926100.0 485.02 721.59 619.53 766.6700000000001 502.77 665.0699999999999 513.29 517.77 820.6 1010.31 822.4300000000001 True False 566.8795183994953 758.3158488399137 707.3886698027927 954.5041844171245 428.81319901539155 735.4472659622631 606.5481488666225 591.165483104123 634.7354102289282 782.0802693092315 618.1979330867209 0.9169870814174549 1.2266554258012003 1.1442753719196925 1.5440106369349935 0.6936503279366959 1.189663094294258 0.9811552520696244 0.9562721766997468 1.0267511039055632 1.2650968685777233 1.0 9.271925020401591 -6.766869151789743 24.99990653226438 1.001362201263877 1.2047654354099384 0.18546447082003525 0.19184034175264925 135.4891347375426 623826.1722747259 0.022641196522376797 0.04367487533344055 1.7105306017524307e-07 6.766869151789743 0.20340323414606143 GQAGLPGGLVS(ph)PGSGDR ddPTM_A549_MK2206_60min_R1 2 GQAGLPGGLVSPGSGDR 17 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GQAGLPGGLVS(0.752)PGS(0.248)GDR;GQAGLPGGLVS(0.75)PGS(0.25)GDR 138.91 7.647399999999999e-13 15239200.0 4806.7 5316.6 4537.1 3624.3 5861.0 5161.5 4033.9 4304.8 6497.0 6914.4 6950.1 True False 5617.953447467841 5587.192230965345 5180.5290038613975 4512.2536627010095 4998.854664019754 5707.686504073595 4766.80741435264 4915.0185828970925 5025.439873577068 5352.432237740643 5224.198356998192 1.0753713897448371 1.069483172184857 0.9916409465811542 0.8637217338152022 0.9568654025786417 1.0925478157673196 0.9124476309302376 0.9408177574867671 0.9619542617184754 1.0245461354986019 1.0 12.350993960111667 -5.796814168289222 4.642166439961936 0.9721767325847132 1.0740400068590892 0.32758582586457197 0.05620713325424247 0.15513625769761377 7.571983007104581 0.007421508639447486 0.026270373120361994 1.5965621593923528e-06 5.796814168289222 0.10186327427437603 GQAGLPGGLVS(ph)PGSGDR ddPTM_A549_PD325901_60min_R1 2 GQAGLPGGLVSPGSGDR 17 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 GQAGLPGGLVS(0.991)PGS(0.009)GDR;GQAGLPGGLVS(0.919)PGS(0.081)GDR 127.32 6.1225e-12 23822000.0 6645.0 8370.0 8669.7 9187.5 8211.0 9473.0 8961.2 9553.099999999999 8525.1 9488.3 11055.1 True False 7319.595508209552 9075.369274517558 9258.077977141287 9754.991008673593 7634.287686412222 9395.85502876314 9302.223369756795 9362.55592623803 8166.8196938338315 8889.207118716588 9695.392784052865 0.7549560570922859 0.9360496760321942 0.954894575531702 1.0061470665447154 0.7874139662468568 0.9691051448908384 0.9594478095882035 0.965670616422855 0.8423402615793705 0.9168485812496112 1.0 13.243083631279509 -5.2602695370092825 24.215333157869615 0.930327977627849 0.7549559751406166 0.4013555099841457 0.0626590077475661 57.13418299915584 1182417.3133842896 0.009603678750886456 0.081967924776303 5.491999170764549e-06 5.2602695370092825 -0.1753720024872324 GQDTVAIEGFT(ph)DEEDTES(ph)GGEGQYR ddPTM_A549_PD325901_60min_R1 1 GQDTVAIEGFTDEEDTESGGEGQYR 25 0 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 2 GQDTVAIEGFT(0.999)DEEDT(0.056)ES(0.945)GGEGQYR 76.476 8.172e-06 1510500.0 250.84 396.88 121.18 0.0 191.16 221.9 182.61 157.0 166.42 136.91 210.16 True False 276.3050921413521 430.32647045048105 129.40400351453695 0.0 177.73358106619904 220.09291997071045 189.55932347802627 153.86851183588266 159.42594614113924 128.2654792347932 184.31165231400436 1.499118957875882 2.3347762610111658 0.7020934481889216 0.0 0.964310063063194 1.1941345932689431 1.0284717276316402 0.8348279118769064 0.8649802882214503 0.6959162788919739 1.0 7.526003471835182 -5.769643252848935 24.99969238397399 0.8793816730117435 1.916947668733717 0.5956220274772599 0.348087878135766 80.65316754638683 245777.85982896993 0.04678395219463364 0.14908042878244432 1.699639231983276e-06 5.769643252848935 1.0375659957219736 GQDVVQEWQET(ph)SPTREEPAGEQK ddPTM_A549_MK2206_60min_R1 1 GQDVVQEWQETSPTREEPAGEQK 23 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GQDVVQEWQET(0.559)S(0.429)PT(0.011)REEPAGEQK 110.03 5.5359e-11 10403000.0 2806.3 2414.3 2075.1 1876.7 3375.2 2903.0 2744.3 2778.3 3856.2 4083.4 4123.1 True False 3279.9348325522733 2537.1775576909367 2369.380383044849 2336.491584248264 2878.712551100405 3210.1935331445566 3242.9037872054223 3172.1325331869075 2982.7768570860253 3160.957103955532 3099.2204782289814 1.058309615463873 0.8186502301187625 0.7645084948582967 0.7538965364553312 0.9288505194523679 1.0358067635701058 1.046361112410611 1.0235259335275142 0.9624280937865071 1.019920049625456 1.0 11.59768967641523 -6.983644448165272 7.9818976898833 0.9935542881601311 0.8404499217911037 0.4810316265376632 0.07884433797878893 0.11678045972557514 40.284103013259156 0.011256942720487073 0.02106998333677522 1.0383781760463733e-07 6.983644448165272 -0.15310436636902747 GQDVVQEWQET(ph)SPTREEPAGEQK ddPTM_A549_PD325901_60min_R1 1 GQDVVQEWQETSPTREEPAGEQK 23 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GQDVVQEWQET(0.495)S(0.495)PT(0.01)REEPAGEQK 88.708 4.7098e-07 21491000.0 3128.2 2773.8 3126.5 2408.7 2611.8 3111.1 2518.8 2736.2 3687.5 3652.9 3174.1 True False 3445.772561140874 3007.5578606519452 3338.683091171808 2557.4799284453943 2428.356178220855 3085.7642330819176 2614.654312340248 2681.624344492624 3532.527198626672 3422.2552705921844 2783.7058222777 1.2378364601477372 1.080415120226707 1.199366349868109 0.9187321116973481 0.8723465528530278 1.1085094582864599 0.9392710578163286 0.9633289275870572 1.269001620198598 1.2293882648102545 1.0 11.442791042125402 -8.726712645667844 24.998545468956188 1.1270287760953137 1.0359353278167265 0.14523073692339084 0.1267075901713707 368.302513139179 265127.7380838421 0.024261629035306074 0.027509525642511204 1.8762355233301357e-09 8.726712645667844 -0.09109344827858723 GQDVVQEWQETS(ph)PTREEPAGEQK ddPTM_A549_MK2206_60min_R1 1 GQDVVQEWQETSPTREEPAGEQK 23 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GQDVVQEWQET(0.422)S(0.565)PT(0.013)REEPAGEQK 133.4 1.1002e-22 9609800.0 2221.3 2238.0 1762.9 1985.5 2928.0 2380.0 2384.5 2372.0 3652.6 3536.0 3378.1 True False 2596.201134429092 2351.904640729119 2012.9057285286326 2471.947589132483 2497.2950786981464 2631.850020283862 2817.7327845320588 2708.238263945341 2825.2919320036335 2737.2151441413453 2539.224539182973 1.0224385809001562 0.9262294863792839 0.7927245887346025 0.9735049228564334 0.983487297071287 1.0364778615170016 1.1096824014778541 1.0665611576110359 1.1126593526513044 1.0779728621487246 1.0 11.310172260286555 -6.966438266032823 1.8956336573313572 1.0594609284853014 0.9156985392046386 0.551276649912986 0.05905953641148435 0.2199523644946796 1.5830826717253719 0.00999459339351089 0.02115306599272567 1.0803431782792814e-07 6.966438266032823 -0.14376238928066276 GQDVVQEWQETS(ph)PTREEPAGEQK ddPTM_A549_PD325901_60min_R1 1 GQDVVQEWQETSPTREEPAGEQK 23 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 GQDVVQEWQET(0.172)S(0.789)PT(0.038)REEPAGEQK 95.212 1.4452e-07 20913000.0 3890.1 3674.2 3490.5 3400.1 3282.2 4299.5 3223.5 3653.1 4186.6 4560.8 4751.1 True False 4285.02008825974 3983.837728606022 3727.3863200816236 3610.1164548126317 3051.669594975299 4264.486297494683 3346.172056466884 3580.2360546984887 4010.651761293676 4272.830309649004 4166.7448197043495 1.0283855320335606 0.9561031214982574 0.8945559378762483 0.8664116981055697 0.7323869656102026 1.023457514683433 0.8030662306563594 0.859240536585709 0.9625383686391074 1.0254600400396447 1.0 12.024705033701853 -8.91397849070985 4.623532979542984 0.9840435826470331 0.8923871972179093 0.2210258950916859 0.08376322170476254 0.2503582805560582 9.23866679707621 0.014469746001338166 0.01519482588713706 1.219049973282279e-09 8.91397849070985 -0.0916563854291238 GQES(ph)FKK ddPTM_A549_MK2206_60min_R1 2 GQESFKK 7 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 GQES(1)FKK;GQES(1)FKK 72.434 0.0082667 53111000.0 15800.9 20139.9 16554.4 13663.7 18682.4 15757.5 14792.599999999999 17417.6 19514.9 20662.7 21812.4 True False 18467.705625084694 21164.934885531897 18902.06284664722 17011.3071133868 15934.24370842563 17424.948191018033 17480.223941484146 19886.598139162896 15094.806308891675 15994.981719131618 16395.779088385385 1.1263695080014247 1.2908770465518735 1.1528615227584558 1.0375418588944914 0.971850353833646 1.0627703689519519 1.0661417092321628 1.2129096172837786 0.9206519694806509 0.9755548445064323 1.0 14.001036836342637 -5.536762067250176 0.3228799993543101 0.967718424450088 1.3779012651845088 0.3163779229093654 0.08846484978896027 4.311316417264519 0.3548824158032842 0.03382638400369191 0.6720654065340022 2.9056140893881837e-06 5.536762067250176 0.4101828407344208 GQES(ph)FKK ddPTM_A549_PD325901_60min_R1 2 GQESFKK 7 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 GQES(1)FKK;GQES(1)FKK 85.355 0.005705600000000001 134888000.0 32855.0 26198.7 25802.6 22194.1 33367.0 22348.7 23971.0 23409.5 24061.6 25082.7 28777.0 True False 36190.41541342735 28406.556393345658 27553.71959963846 23564.979150541767 31023.41702990092 22166.699596887865 24883.229522434507 22942.57915810251 23050.374628467944 23498.974041359626 25237.611432432936 1.4339873450511615 1.1255643771755794 1.091772082845728 0.9337246202411349 1.2292532957390978 0.8783200286696453 0.9859581834458783 0.9090630157107075 0.9133342388672263 0.9311092733269132 1.0 14.623287755097817 -2.000000000054784 0.58966229804208 0.9592320530825433 27.974594145323213 0.7024968947135484 0.08826242230470721 55.96540191650759 0.40985607801247076 0.014191642987118313 1948.7552582460362 0.009999999998738547 2.000000000054784 27.015362092240668 GQES(ph)FKKQEK ddPTM_A549_MK2206_60min_R1 1 GQESFKKQEK 10 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 GQES(1)FKKQEK 40.941 0.01931 10210000.0 2894.0 5772.5 4447.1 2921.6 5296.7 3166.4 2895.2 3934.1 4872.3 4697.7 5409.7 True False 3382.4364484931325 6066.2955936590015 5077.7656505415425 3637.392131155609 4517.562446496062 3501.4663463137886 3421.220363924184 4491.770722675955 3768.7318294643 3636.4863073056536 4066.322189875414 0.8318171287348889 1.4918384009912564 1.2487366749207636 0.894516460159556 1.1109701188322396 0.8610892553059275 0.8413549650449623 1.1046273543842269 0.926815843281658 0.894293697720266 1.0 11.989508814483251 -6.255551247835469 24.79508287640929 0.964971451797346 1.2209015197610624 0.2797099915000504 0.16654300474704262 350.9508009937909 1477856.2415756255 0.020516878448063228 0.05273363807139454 5.551990983712358e-07 6.255551247835469 0.2559300679637164 GQES(ph)FKKQEK ddPTM_A549_PD325901_60min_R1 1 GQESFKKQEK 10 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 GQES(1)FKKQEK 55.841 0.0033649 19689000.0 5847.7 3606.6 3539.8 3218.8 4921.8 4603.8 4192.2 3418.9 3271.0 3710.0 3836.7 True False 6441.354199150787 3910.5408393638004 3780.0321145466046 3417.617965574808 4576.109747288229 4566.308179185024 4351.736465059865 3350.7073574248348 3133.5312452089083 3475.7499668474397 3364.810222845169 1.91432912186774 1.1621876362635335 1.1234012809644693 1.0156941221739948 1.3599904435082306 1.357077480382804 1.293308144249569 0.9958087189213277 0.9312653723927707 1.0329705798113227 1.0 11.716309422995161 -2.961007357889573 1.1558949690275129 1.0472276119798898 199.99978533686323 0.6436181629893702 0.16021634786267155 171.27676905077578 1.2792028887507911 0.027689536736685783 89166.09719871805 0.0010939378324378154 2.961007357889573 198.95255772488335 GQES(ph)PLKK ddPTM_A549_MK2206_60min_R1 2 GQESPLKK 8 1 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 GQES(1)PLKK;GQES(1)PLKK 67.08 0.0034203000000000002 68023000.0 13686.599999999999 14744.900000000001 12626.6 12275.2 18256.1 14742.400000000001 13829.8 13791.3 19769.0 19097.7 18970.9 True False 15996.563474756766 15495.352429440041 14417.241744761257 15282.624551054676 15570.651873709428 16302.430982786882 16342.495644169214 15746.259009084906 15291.353064605997 14783.516306071317 14259.901959795825 1.1217863572875368 1.0866380759929086 1.0110337213684242 1.0717201698961396 1.0919185782349075 1.1432358391207553 1.146045441984456 1.1042333287760109 1.072332271828953 1.0367193510692965 1.0 13.799676442495164 -9.984829413632715 0.8417926191699326 1.0066637259448754 1.0945274893040393 0.3848144701814268 0.036662484753614034 0.38174337018001586 0.5488545586221707 0.01680080105005608 0.008035116268888807 1.0355488396474751e-10 9.984829413632715 0.0878637633591639 GQES(ph)PLKK ddPTM_A549_PD325901_60min_R1 2 GQESPLKK 8 1 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 GQES(1)PLKK;GQES(1)PLKK 67.749 0.0032884 111158000.0 23644.1 23339.3 25220.4 23965.5 28186.0 25064.0 27728.0 26751.4 26417.4 27223.0 27695.0 True False 26044.431626133526 25306.18472028048 26932.008006585456 25445.794505400485 26206.312596421238 24859.887093942714 28783.204213343808 26217.82234093269 25307.16854698313 25504.135134093747 24288.690573069794 1.0722863609210131 1.0418916838744217 1.1088291452173404 1.047639617658666 1.0789512311329625 1.023516974665824 1.1850455308306052 1.0794251037148057 1.0419321894216307 1.0500415844718933 1.0 14.567997094526957 -9.239868777405029 1.5007274762343346 1.012554327777822 1.0790004692073003 0.1906993214491255 0.04228744383491503 0.290448742780482 1.35324688736283 0.008851126512156905 0.007869394809156214 5.756138334697369e-10 9.239868777405029 0.06644614142947836 GQES(ph)PLKKS(ph)PSAGDVHILTGFAK ddPTM_A549_PD325901_60min_R1 1 GQESPLKKSPSAGDVHILTGFAK 23 2 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 2 GQES(0.977)PLKKS(0.888)PS(0.135)AGDVHILTGFAK 52.685 0.0023991 3130200.0 1968.5 2258.8 2634.9 2352.6 2468.5 2330.8 2226.6 2779.1 3105.6 2406.2 2813.0 True False 2168.340670866891 2449.1570032592886 2813.7201589408573 2497.9147588577393 2295.1210758626917 2311.8187375742787 2311.3344814422703 2723.6686703382256 2975.082432014916 2254.272121355338 2467.0188330762003 0.8789315435274248 0.9927597513332967 1.1405345274289393 1.012523587322199 0.9303216680356007 0.9370900240317995 0.9368937320029282 1.1040323786024775 1.2059423268792788 0.9137636450648486 1.0 11.268553013790974 -8.274204120196408 23.858815213360558 1.10047648208476 0.9807843882600611 0.0770689793281023 0.09511708961892783 444.44088448948366 830710.927686155 0.01603639575907938 0.019458002316516655 5.318582249550736e-09 8.274204120196408 -0.11969209382469881 GQEVETS(ph)VTYYR ddPTM_A549_MK2206_60min_R1 2 GQEVETSVTYYR 12 0 D6RFH4;H3BUX2;O43169 D6RFH4 CYB5B Cytochrome b5 type B 1 GQEVET(0.049)S(0.95)VT(0.001)YYR;GQEVET(0.175)S(0.825)VTYYR 188.13 2.0203999999999999e-19 34541000.0 9812.599999999999 11187.599999999999 8717.599999999999 7257.9 11727.5 9900.5 8402.2 9251.0 11388.0 11361.3 11409.2 True False 11468.726984963268 11757.001053896825 9953.886765568774 9036.085825819515 10002.400285325306 10948.16433857998 9928.770980161573 10562.357579999307 8808.63618289914 8794.774439234467 8575.980762098929 1.3373079188387025 1.3709220414598222 1.1606703701528138 1.0536504309517571 1.1663272764708568 1.2766078472289473 1.1577417505460397 1.2316209507697429 1.027128724661839 1.0255123796572032 1.0 13.066085954163976 -2.00000000062827 0.11416278434758646 0.895605894568263 2.2456987306298717 0.5273404307409362 0.08474721075080782 47.343732523152276 0.36202253877583945 0.38820041881674044 10.165298896354102 0.009999999985533551 2.00000000062827 1.3500928360616087 GQEVETS(ph)VTYYR ddPTM_A549_PD325901_60min_R1 1 GQEVETSVTYYR 12 0 D6RFH4;H3BUX2;O43169 D6RFH4 CYB5B Cytochrome b5 type B 1 GQEVET(0.013)S(0.987)VTYYR 174.39 7.2765e-16 24212000.0 9798.2 10013.0 9141.4 9912.1 10359.0 8569.5 8472.6 9023.6 9889.6 9697.3 9720.9 True False 10792.906050946396 10856.830650626564 9761.790375703804 10524.34790498759 9631.419576609933 8499.712833208669 8795.029429384622 8843.617219122742 9473.974504010399 9085.010823048427 8525.29092586222 1.2659868319807324 1.2734850628606014 1.1450389741059221 1.2344854851886702 1.1297467336149403 0.9969997396128784 1.0316398004323966 1.0373390534151568 1.1112787336406624 1.0656540524016895 1.0 13.057533351659563 -6.9527127998801745 3.3481693190311708 1.0473796910598137 1.2269290167987186 0.8069931111360379 0.043090686391799145 0.09798155081882451 2.270107645171844 0.007705299908608178 0.014997544854775715 1.1150316632977504e-07 6.9527127998801745 0.17954932573890492 GQFSTDELVAEVEKR ddPTM_A549_MK2206_60min_R1 1 GQFSTDELVAEVEKR 15 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 62.055 0.0050449 1233000.0 986.35 885.47 906.83 799.08 1320.9 657.03 850.49 935.41 1326.3 1383.5 1707.1 False True 1152.8217660577743 930.5366408518379 1035.4321299005164 994.8546358720644 1126.5973597856487 726.5564784987836 1005.0130240791245 1068.0072320729814 1025.8951676658874 1070.9663891175203 1283.1799564368296 0.8984100478462603 0.7251801558962769 0.8069266705004757 0.7753040646259819 0.8779730030338193 0.5662155762752921 0.7832206379453379 0.8323129010202545 0.7994943830907569 0.8346190132921107 1.0 10.325507796518439 -10.433519306198349 0.6125032371547444 1.0149557023553348 0.7762634649763722 0.15037364021827326 0.09558821289339003 0.594710809446097 0.371731603734275 0.07401135469596062 0.017486563379534584 3.6853665849907914e-11 10.433519306198349 -0.2386922373789626 GQFSTDELVAEVEKR ddPTM_A549_PD325901_60min_R1 2 GQFSTDELVAEVEKR 15 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ; 131.72 2.3665e-09 6712300.0 2798.1000000000004 2604.0 2260.0 2627.8 2875.9 3421.8999999999996 2589.8 3015.3999999999996 3173.7 2765.7 3748.2 False True 3082.1610521476496 2823.4482187387935 2413.377190484018 2790.113237833192 2673.9067053163944 3394.0331809273275 2688.3562561929375 2955.25548146446 3040.320425839044 2591.0732300026852 3287.1951617974446 0.9376264263124304 0.8589232095349418 0.7341752076455291 0.8487823510629509 0.8134310783830362 1.0325012704969618 0.8178267866283118 0.8990203915512338 0.9248980593463125 0.7882322473929054 1.0 11.682641396875582 -9.139420739759224 0.34502471335752266 1.0106132243932868 0.8366743835104077 0.0 0.0941110192741073 0.9906752164846919 0.32205151732061 0.06338186466399623 0.04148283297387689 7.254028545340795e-10 9.139420739759224 -0.17393884088287914 GQGESDPLDHEPAVS(ph)PLLPR ddPTM_A549_MK2206_60min_R1 2 GQGESDPLDHEPAVSPLLPR 20 0 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR 68.074 0.00038573 11540600.0 1588.49 1470.0 1501.03 1425.24 2101.23 1863.52 1981.0 1776.7 2318.4 2509.6000000000004 2517.0 True False 1856.5882771481868 1544.8167211223447 1713.8986248189535 1774.4238639814548 1792.1418504825508 2060.716449495537 2340.9220575206577 2028.552665915552 1793.2861017240382 1942.6796170071036 1891.9594343339586 0.9813044843647909 0.8165168306931373 0.9058855035241867 0.9378762735502938 0.9472411606507053 1.0891969521645621 1.2373003432522067 1.072196702055443 0.9478459575722049 1.0268082823303242 1.0 10.885665440721725 -6.849564219019955 2.6404299575132835 1.0116060112258218 0.8996769459384668 0.34043980841837385 0.08563517146862963 0.34118393204395686 4.832212921381341 0.014543654149954526 0.030378038247540613 1.4139556283343588e-07 6.849564219019955 -0.11192906528735502 GQGESDPLDHEPAVS(ph)PLLPR ddPTM_A549_PD325901_60min_R1 1 GQGESDPLDHEPAVSPLLPR 20 0 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 GQGES(0.001)DPLDHEPAVS(0.999)PLLPR 45.332 0.010209000000000001 12302000.0 1013.1 1081.5 1316.7 789.66 1418.5 1051.2 1362.5 1132.7 1461.7 1144.7 1296.2 True False 1115.9491661951988 1172.6418005245798 1406.0591799603137 838.4355047520205 1318.8694535593393 1042.6393757242497 1414.3506830886074 1110.10740991404 1400.2698321986734 1072.4234466442763 1136.7756172887912 0.981679365059515 1.031550802718068 1.2368836545894286 0.7375558483139253 1.160184502113831 0.9171901295797878 1.244177532996206 0.9765404825990597 1.2317908749118984 0.9433906131818742 1.0 10.150731800307392 -7.747409621410186 24.998171102415554 1.109339338820155 1.0164231096658691 0.031181491365931402 0.15034072807299342 472.24802687665664 841447.7470426677 0.021774540978997295 0.032212034320355194 1.7889177720219395e-08 7.747409621410186 -0.09291622915428577 GQGPRS(ph)PHK ddPTM_A549_MK2206_60min_R1 2 GQGPRSPHK 9 1 Q86U38-2;Q86U38 Q86U38-2 NOP9 Nucleolar protein 9 1 GQGPRS(1)PHK;GQGPRS(1)PHK 54.471000000000004 0.0083038 382120000.0 2194.25 1670.6000000000001 1521.67 1203.53 2037.0 1512.94 1754.31 1581.29 1989.2600000000002 2759.86 2785.46 True False 2564.585755738097 1755.6264042904684 1737.4656871803072 1498.3949040285145 1737.359998397584 1673.0383065917072 2073.045418843548 1805.4426999975237 1538.6957861954636 2136.4057091939853 2093.753407214884 1.2248747855887743 0.8385067688681671 0.8298330076470124 0.7156501328500203 0.8297825295045725 0.7990617714705891 0.9901096335891426 0.862299587800613 0.7348982840544916 1.0203712155558171 1.0 11.031875822853838 -5.2596646817064165 24.680360320888635 0.8570411856485155 1.2248749336428193 0.5322568728477126 0.09767644306604618 85.01032402468071 1182100.8728000263 0.014787592522564749 0.13111524085425777 5.499653376070619e-06 5.2596646817064165 0.3678337479943038 GQGPRS(ph)PHK ddPTM_A549_PD325901_60min_R1 5 GQGPRSPHK 9 1 Q86U38-2;Q86U38 Q86U38-2 NOP9 Nucleolar protein 9 1 GQGPRS(1)PHK;GQGPRS(1)PHK;GQGPRS(1)PHK;GQGPRS(1)PHK;GQGPRS(1)PHK 79.82 0.00048026 782329000.0 22019.309999999998 20503.719999999998 15411.47 14931.550000000003 17269.09 13291.99 10860.81 13584.949999999999 15136.75 20939.29 24532.489999999998 True False 24254.694141440723 22231.6404422116 16457.385030897673 15853.83793148954 16056.168693526288 13183.744440385246 11274.124067813273 13313.987515062892 14500.60503696604 19617.179655878404 21515.14925426717 1.1273309729250525 1.0333017066010977 0.7649207930841393 0.7368686010089005 0.7462727078382603 0.6127656510572648 0.5240086384981615 0.6188192030516491 0.6739718542315056 0.9117845023542035 1.0 14.393065228092432 -5.682388209312645 3.786171596602412 0.772605277119399 1.1072642188617445 0.4892765269975896 0.13315654973367938 0.19740218614270102 5.35065937699019 0.02427608742616047 0.10715414006490218 2.077838508102795e-06 5.682388209312645 0.33465894174234556 GQGPRS(ph)PHKVGR ddPTM_A549_MK2206_60min_R1 2 GQGPRSPHKVGR 12 2 Q86U38-2;Q86U38 Q86U38-2 NOP9 Nucleolar protein 9 1 GQGPRS(1)PHKVGR;GQGPRS(1)PHKVGR 55.452 0.0047213 11731000.0 542.5 528.98 796.52 824.39 1094.08 683.03 865.8 592.23 1554.44 1449.94 1529.9499999999998 True False 634.060737148419 555.9028225437401 909.4785131814766 1026.365587008273 933.142281319012 755.3077812413802 1023.1046529032743 676.1804161283095 1202.3618219306054 1122.3975469729357 1150.0211905281037 0.5513470033167394 0.4833848516203973 0.7908363086456112 0.8924753695511936 0.8114131191708752 0.6567772728557582 0.8896398269265389 0.5879721362506366 1.0455127538810536 0.9759798829946056 1.0 10.167444729473607 -4.873462007872312 0.18832681548558636 1.0843190409402068 8.473128651735883e-18 0.45309924651846656 0.13643382576548677 10.104531824140377 0.2826246090727172 0.17262157275495327 2.6584774629393872 1.338252280486012e-05 4.873462007872312 -1.0843190409402068 GQGPRS(ph)PHKVGR ddPTM_A549_PD325901_60min_R1 1 GQGPRSPHKVGR 12 2 Q86U38-2;Q86U38 Q86U38-2 NOP9 Nucleolar protein 9 1 GQGPRS(1)PHKVGR 50.843 0.0072215000000000005 6962800.0 364.76 282.57 457.63 452.74 340.87 732.81 575.72 494.42 519.17 418.21 601.64 True False 401.79016667788045 306.3831655795013 488.68752375274414 480.70472155285796 316.9284671376609 726.8422383223815 597.6293396460721 484.55840523501365 497.35109036230773 391.80414922783507 527.6420941101901 0.7614823971833692 0.5806647517313465 0.9261723604081692 0.9110431614890643 0.600650461127681 1.377528909152179 1.1326415127168876 0.9183467555828116 0.9425917604262322 0.7425566564937722 1.0 9.043415853950131 -6.27781233586134 1.0018170568070242 0.9942807583804825 0.6773332102978562 0.21582079595283732 0.1945018899398705 0.6587753839199038 1.0963960182286643 0.02735483304413585 0.1515786134013187 5.274577333440599e-07 6.27781233586134 -0.31694754808262626 GQGRSS(ph)VDLEESSTK ddPTM_A549_MK2206_60min_R1 1 GQGRSSVDLEESSTK 15 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 GQGRS(0.452)S(0.547)VDLEESSTK 43.534 0.033558 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GQGS(ph)SPVAMQK ddPTM_A549_PD325901_60min_R1 1 GQGSSPVAMQK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 GQGS(0.5)S(0.5)PVAMQK 179.83 4.6206e-16 41237000.0 13783.0 14305.0 15695.0 14273.0 17125.0 14750.0 15317.0 15025.0 15134.0 13559.0 15979.0 True False 15182.240013491684 15510.53255340187 16760.157081702066 15154.610793665093 15922.199078042786 14629.880890346907 15899.896816784016 14725.314588115516 14497.970609902657 12702.882426006589 14013.684299226657 1.083386758921743 1.106813327759768 1.195985061731908 1.0814151703489852 1.1361893659129634 1.043971062710058 1.134597902827128 1.0507810989382806 1.034558100520555 0.9064627227764503 1.0 13.774548680175004 -8.49705112212113 0.6112726795188452 1.0055629994941058 1.1232817198865257 0.5783010985798208 0.0479748365448373 0.316718730053721 0.2537542118485034 0.010079615732790374 0.011957390515019572 3.183822722234697e-09 8.49705112212113 0.11771872039241993 GQGSS(ph)PVAMQK ddPTM_A549_MK2206_60min_R1 5 GQGSSPVAMQK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 GQGS(0.143)S(0.857)PVAMQK;GQGS(0.123)S(0.877)PVAMQK;GQGS(0.061)S(0.939)PVAMQK;GQGS(0.078)S(0.922)PVAMQK;GQGS(0.176)S(0.824)PVAMQK 177.16 1.6319000000000003e-15 134478400.0 19336.9 23991.2 23705.6 20222.1 27686.6 22092.2 19617.3 20932.9 30087.0 32486.5 33786.4 True False 22600.49597818481 25212.24960529958 27067.410538435724 25176.515407804556 23613.93781621723 24429.98194038451 23181.509479555796 23900.20267931765 23272.342539066227 25147.777087145856 25396.304422797326 0.8899127842355353 0.992752692894462 1.065801153105501 0.9913456300045186 0.9298178751952535 0.9619502717275124 0.9127906601539478 0.9410897854044984 0.9163672852407417 0.9902140354157837 1.0 14.632330956121635 -6.736045855296756 23.543825849495573 0.9528343805243438 0.9912850962933233 0.10962557753055391 0.04586256578887646 207.00525942281158 191924.09078373908 0.007063719895085864 0.014698222883528313 1.8363444413568362e-07 6.736045855296756 0.038450715768979515 GQGSS(ph)PVAMQK ddPTM_A549_PD325901_60min_R1 5 GQGSSPVAMQK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 GQGS(0.194)S(0.806)PVAMQK;GQGS(0.032)S(0.968)PVAMQK;GQGS(0.056)S(0.944)PVAMQK;GQGS(0.166)S(0.834)PVAMQK;GQGS(0.072)S(0.928)PVAMQK 115.83 7.5126e-06 159755000.0 35964.200000000004 34577.6 36117.2 33837.5 40760.8 38660.6 37151.3 40135.5 37280.7 39240.200000000004 42800.99999999999 True False 39615.25910855528 37491.57570209773 38568.33038236699 35927.56552446178 37897.902025126205 38345.76089148106 38565.11305147144 39334.96596680933 35713.9218261265 36762.56707522556 37536.74833789349 1.05537269110131 0.9987965756812729 1.0274819234523869 0.9571304685492101 1.009621336509538 1.0215525475543354 1.027396211955307 1.0479055248134141 0.9514388807640314 0.9793753775447195 1.0 15.196016060086427 -8.767169401837275 24.999999480720493 0.9770683619420566 1.0159250300293008 0.31829873135371434 0.026720212515710617 136.07936783273638 593711.0876679994 0.005071884485306234 0.005472469857751641 1.7093484329192971e-09 8.767169401837275 0.038856668087244195 GQGT(ph)PPSGPGVVR ddPTM_A549_MK2206_60min_R1 1 GQGTPPSGPGVVR 13 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GQGT(0.989)PPS(0.011)GPGVVR 70.165 0.0031 20577000.0 2582.6 3080.1 2377.5 2318.6 3187.0 2249.3 2136.4 2365.5 3769.7 4214.0 3520.4 True False 3018.479741492179 3236.863933829204 2714.6652501995695 2886.65710408591 2718.1965217933707 2487.3194330355004 2524.5562259904773 2700.816869039926 2915.8689689739076 3262.054473249893 2646.1875219027693 1.140690036706737 1.2232178963272047 1.0258778819452525 1.0908739763122413 1.0272123571343963 0.9399634048787922 0.9540352696452775 1.020644548689382 1.1019132033686037 1.2327374557734585 1.0 11.369699586389473 -5.76934939439051 24.991219202757936 1.034049817709292 1.1819539730518138 0.31106188382544475 0.07829074121434064 97.17393630965411 307019.53799548885 0.008222554790437675 0.02624056350173476 1.7007896550190654e-06 5.76934939439051 0.14790415534252177 GQGT(ph)PPSGPGVVR ddPTM_A549_PD325901_60min_R1 2 GQGTPPSGPGVVR 13 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GQGT(1)PPSGPGVVR;GQGT(0.999)PPS(0.001)GPGVVR 162.16 1.1449e-18 54218000.0 11149.8 11482.8 11619.099999999999 11483.599999999999 13062.6 12379.400000000001 12353.3 11801.4 11486.7 12321.8 12058.099999999999 True False 12281.719487951063 12450.495854890098 12407.64199732428 12192.915890852133 12145.128039523597 12278.586270776983 12823.411591485139 11566.011818980796 11003.953945075258 11543.799445148457 10575.030142593716 1.1613886033745857 1.177348498019164 1.1732961353319682 1.1529911240386879 1.1484721911671816 1.1610923189071345 1.2126122969461313 1.0937095840886204 1.0405600548365284 1.0916091291931895 1.0 13.36837415509406 -8.620890089739728 2.3054405634327257 1.0172451687560253 1.168270252223088 0.7709380353037347 0.029371336878468265 0.05646972382758391 0.5970937313161288 0.003798800969829256 0.0043111014276524156 2.393921527967112e-09 8.620890089739728 0.15102508346706256 GQKPALDCSQVS(ph)PPRPAT(ph)SPENNASLSDTSPMDSSPSGIPK ddPTM_A549_PD325901_60min_R1 1 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 2 GQKPALDCS(0.013)QVS(0.712)PPRPAT(0.31)S(0.296)PENNAS(0.163)LS(0.163)DT(0.163)S(0.163)PMDS(0.013)S(0.004)PSGIPK 59.776 0.0017717 12868000.0 507.94 589.04 636.03 444.82 623.63 597.88 787.4 962.1 510.27 479.51 764.68 True False 559.5056948743351 638.6804680360597 679.1948205590929 472.295521140483 579.8283802067048 593.0110635064822 817.3649378818128 942.9101607471506 488.8251264117239 449.23365676631124 670.6292077059046 0.8342996225713133 0.9523600533607304 1.0127725019351448 0.7042573089772163 0.8646035298554737 0.8842607161937677 1.2188030710410949 1.4060081933691309 0.7289052143790485 0.6698689105758672 1.0 9.38937150752444 -5.2498503545037325 20.780773868707318 0.9271905451478774 0.8342991177211045 0.016287569304066607 0.21074630075654124 769.9820433246632 1380380.0242442046 0.028988996943319335 0.5217143883916577 5.625351253651519e-06 5.2498503545037325 -0.09289142742677281 GQKPALDCSQVS(ph)PPRPATSPENNASLSDTSPMDS(ph)SPSGIPK ddPTM_A549_PD325901_60min_R1 1 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 2 GQKPALDCS(0.078)QVS(0.366)PPRPAT(0.133)S(0.138)PENNAS(0.099)LS(0.087)DT(0.087)S(0.088)PMDS(0.41)S(0.443)PS(0.07)GIPK 48.626999999999995 0.014058000000000001 10456000.0 792.0 753.81 577.55 789.28 1157.4 978.25 1110.4 987.56 989.74 979.7 1137.7 True False 872.4032569604161 817.3362141964254 616.746016090285 838.032033015063 1076.108216813239 970.2834563377538 1152.656879634195 967.862341074167 948.1446697135633 917.8415748033524 997.7701124745095 0.8743529657315766 0.819162855228645 0.6181243638985442 0.8399049265333377 1.0785131798991734 0.9724519147315531 1.1552329191095536 0.9700253885875876 0.9502636507743522 0.919892832355009 1.0 9.962563644819001 -6.5894133698721165 5.941081225684588 0.9943625541672076 0.7679831968318924 0.6136178553646912 0.0842912936668974 0.0978341846396283 6.399866450384691 0.011533359658505594 0.02432416453075364 2.5738701314401256e-07 6.5894133698721165 -0.22637935733531522 GQKPALDCSQVS(ph)PPRPATSPENNASLSDTSPMDSSPSGIPK ddPTM_A549_MK2206_60min_R1 2 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 GQKPALDCS(0.029)QVS(0.42)PPRPAT(0.108)S(0.108)PENNAS(0.108)LS(0.108)DT(0.095)S(0.023)PMDSSPSGIPK;GQKPALDCS(0.037)QVS(0.137)PPRPAT(0.137)S(0.137)PENNAS(0.137)LS(0.137)DT(0.137)S(0.137)PMDS(0.003)S(0.001)PSGIPK 61.736999999999995 0.0001056 56591000.0 1009.06 1446.72 1326.24 905.71 1528.52 922.99 1142.21 1132.73 1835.63 1567.74 1715.56 True False 1179.364658851583 1520.3518685592649 1514.320774521421 1127.6089906588668 1303.6767328182007 1020.6601891688238 1349.734771994281 1293.2979463401373 1419.8627358987649 1213.5864451572822 1289.5391049527075 0.9145629274226895 1.1789885725218252 1.1743116348355773 0.8744279148480888 1.0109633184532327 0.7914922356745866 1.046679985748692 1.002914871967041 1.1010621782972894 0.9411009255138403 1.0 10.332639807820954 GQKPALDCSQVS(ph)PPRPATSPENNASLSDTSPMDSSPSGIPK ddPTM_A549_PD325901_60min_R1 1 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 GQKPALDCS(0.038)QVS(0.61)PPRPAT(0.158)S(0.158)PENNAS(0.009)LS(0.009)DT(0.009)S(0.009)PMDSSPSGIPK 61.168 0.0001107 72865000.0 384.25 419.11 373.42 432.39 372.88 217.32 429.48 420.51 365.83 447.46 471.73 True False 423.2587771301007 454.42987056667266 398.7625267568769 459.09774827106116 346.69019516616595 215.55021797221642 445.8240964204739 412.1225981662869 350.4554373080939 419.2072992359989 413.71020054284986 1.023080350870541 1.0984255886618035 0.9638692162621096 1.1097085536413074 0.8380025310259607 0.521017411921152 1.0776241335975902 0.9961625254236424 0.8471036896074686 1.013287317271694 1.0 8.692476719238416 -6.760169981032237 24.999989603139795 0.906559428355031 1.0462532824174735 0.1987732310585072 0.14408463129314947 47.748783703345346 940343.9843573098 0.020954961984050054 0.04180542023259204 1.7371207939096125e-07 6.760169981032237 0.1396938540624425 GQKPALDCSQVSPPRPAT(ph)SPENNASLSDTSPMDSSPSGIPK ddPTM_A549_PD325901_60min_R1 1 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 GQKPALDCS(0.001)QVS(0.078)PPRPAT(0.458)S(0.458)PENNAS(0.004)LS(0.001)DTSPMDSSPSGIPK 107.68 4.6998e-15 55907000.0 546.15 512.14 741.98 476.93 712.43 428.69 695.1 492.33 563.18 584.33 550.42 True False 601.5947459456197 555.2998351554861 792.3352246882004 506.3888829133815 662.3913745500739 425.19889077171666 721.5524108733148 482.5100919245867 539.5115031112051 547.4353040776186 482.72182939985834 1.2462555229655754 1.150351613155469 1.6413909138380327 1.0490283473257198 1.3722009948743956 0.8808362598814792 1.4947581959787928 0.9995613675156665 1.1176447184540013 1.1340595571536822 1.0 8.91504825885023 -8.235879902598008 0.3151748501585552 0.9935663710164643 1.3299294185675885 0.13288972972938629 0.2045436669834358 1.6009757312836022 0.447216783611519 0.13183633181036553 0.18991831318308522 5.809250411198485e-09 8.235879902598008 0.33636304755112423 GQKPPPT(ph)PSGK ddPTM_A549_PD325901_60min_R1 2 GQKPPPTPSGK 11 1 A0A1B0GV68;M0QYB0;Q9Y4F1-3;C9JME2;Q9Y4F1;Q9Y4F1-2 A0A1B0GV68;C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 GQKPPPT(0.994)PS(0.006)GK;GQKPPPT(0.974)PS(0.026)GK 58.831 0.0042067 17057700.0 4357.0 4871.1 4994.1 5171.9 5753.1 4692.5 4950.5 5195.0 5712.2 5236.3 5724.1 True False 4799.3194325461245 5281.60469212694 5333.029657962938 5491.356516762875 5349.0221031175415 4654.285835793419 5138.893986517542 5091.381649601338 5472.136098710588 4905.679124367454 5020.07198805954 0.9560260179458612 1.052097401130794 1.0623412713299294 1.093880033956546 1.0655269716929208 0.9271352775147131 1.0236693813834992 1.0142049081589688 1.090051320324948 0.9772129037264458 1.0 12.29349233729866 -11.303962733643308 1.8793140830819532 0.999836661525144 1.04247336841073 0.05417462731735545 0.05086852942017902 0.7911348855954288 5.045514641498692 0.040333549802533196 0.007922217664984986 4.9663493534798795e-12 11.303962733643308 0.04263670688558585 GQKS(ph)PGALETPSAAGSQGNTASQGK ddPTM_A549_MK2206_60min_R1 2 GQKSPGALETPSAAGSQGNTASQGK 25 1 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 GQKS(1)PGALETPSAAGSQGNTASQGK;GQKS(0.999)PGALET(0.001)PSAAGSQGNTASQGK 185.38 1.4673e-57 69100000.0 1866.1399999999999 1941.31 2319.8 1991.27 2665.98 1914.6 1612.15 1965.71 2513.9 3149.3 2962.6 True False 2181.0988092574194 2040.1143869945693 2648.7825225711736 2479.1312393915077 2273.817873602352 2117.2017011913786 1905.056786992392 2244.3554122343994 1944.5056638733884 2437.8709427161584 2226.904656399597 0.9794307102414365 0.9161211195691576 1.1894458592823898 1.1132633057580938 1.02106655849317 0.9507374710035482 0.8554729909597654 1.007836328234643 0.8731876590609028 1.094735212713438 1.0 11.120824075978613 -7.205983547773556 3.7757707887390817 0.9377163352123906 1.0511748425910163 0.1335069914411352 0.09096841905877152 0.2401576254605665 7.013935841117641 0.012611786240054344 0.022152396816095172 6.223238600004372e-08 7.205983547773556 0.11345850737862573 GQKS(ph)PGALETPSAAGSQGNTASQGK ddPTM_A549_PD325901_60min_R1 2 GQKSPGALETPSAAGSQGNTASQGK 25 1 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 GQKS(0.996)PGALET(0.004)PSAAGSQGNTASQGK;GQKS(0.996)PGALET(0.004)PSAAGSQGNTASQGK 235.42 1.9588999999999997e-111 118442000.0 9600.1 10115.7 9821.699999999999 9754.9 11203.1 11276.3 12222.0 12365.7 12566.400000000001 11977.3 11300.8 True False 10574.695084779914 10968.185540052238 10488.259624680042 10357.438018014695 10416.232904596856 11184.469551445345 12687.114898135027 12119.056412796012 12038.277908833154 11221.05123394119 9910.873241673497 1.0669791477420136 1.10668205238797 1.0582578718269482 1.0450580655661572 1.050990427442701 1.1285049539748524 1.2801207914543713 1.2228040978102201 1.2146536047110652 1.1321960194948941 1.0 13.274796462752875 -7.272766922743541 21.174291652118566 1.1304370840839935 1.066327819524538 0.25364852780825364 0.07225687269936572 196.1808913387132 366716.9735973162 0.01529204747468626 0.024635180224476447 5.336212025954671e-08 7.272766922743541 -0.06410926455945543 GQLKKS(ph)PEALK ddPTM_A549_PD325901_60min_R1 1 GQLKKSPEALK 11 2 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 GQLKKS(1)PEALK 55.213 0.0035876 27271000.0 3639.3 3838.4 3640.4 3593.0 4139.2 4500.6 4261.6 4505.8 4498.1 3861.3 4278.7 True False 4008.7590568889423 4161.875438865974 3887.4594355035492 3814.931449704948 3848.476871464799 4463.948605769176 4423.777520037001 4415.92828426828 4309.060499564106 3617.4968590264184 3752.4470249140204 1.0683053032522944 1.109109711938261 1.0359798312123067 1.0166516474119602 1.0255912597601504 1.1896100267721854 1.1789047228823604 1.1768129583040448 1.1483334663899325 0.9640367565506953 1.0 11.873615989437216 GQLTKS(ph)PLAQMEEER ddPTM_A549_MK2206_60min_R1 1 GQLTKSPLAQMEEER 15 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 G3V1Q4 SEPT7 Septin-7 1 GQLT(0.059)KS(0.941)PLAQMEEER 44.586999999999996 0.0122 18224000.0 1336.6 1300.4 1821.7 1538.6 1970.1 1405.6 1388.5 1165.2 1997.2 1820.9 2516.4 True False 1562.1854032674225 1366.5848055425145 2080.0444526976066 1915.5570690703796 1680.3008997756895 1554.3396590382333 1640.772476964884 1330.3706682753418 1544.8373888730368 1409.5574253300265 1891.5084308931155 0.8258939678792782 0.7224841207275258 1.0996749571533604 1.0127139999930685 0.8883391013923739 0.8217460909250714 0.8674412707693608 0.7033384818946746 0.8167224441836664 0.7452028245332611 1.0 10.885321491491132 -10.861434698518728 1.188149482058452 0.9977305397488492 0.8613300003652261 0.0 0.1316441979943222 0.6853460077563808 1.761911954147021 0.07344784602890335 0.019111669386854904 1.3758316678233802e-11 10.861434698518728 -0.13640053938362307 GQLTKS(ph)PLAQMEEER ddPTM_A549_PD325901_60min_R1 4 GQLTKSPLAQMEEER 15 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 G3V1Q4 SEPT7 Septin-7 1 GQLT(0.015)KS(0.985)PLAQMEEER;GQLT(0.073)KS(0.927)PLAQMEEER;GQLT(0.005)KS(0.995)PLAQMEEER;GQLT(0.006)KS(0.994)PLAQMEEER 161.47 2.7897e-20 248685000.0 34658.0 36845.6 36687.1 36648.6 43911.299999999996 37593.7 37141.0 40409.1 37932.9 38664.2 41383.2 True False 38176.4546461289 39950.70802164446 39176.9072234541 38912.300786990476 40827.12177376114 37287.54937135152 38554.42107933503 39603.108800174305 36338.71212821309 36222.93581352633 36293.328749718814 1.0518862821703747 1.1007727700357048 1.0794520252914974 1.0721612518744772 1.1249208375265785 1.0273940323437654 1.0623004945401635 1.0911952737452095 1.0012504606234176 0.9980604442023514 1.0 15.147416763467087 -8.76856732459497 24.843712014745595 1.0005904871687616 1.076575011594973 0.6658874264284906 0.024127712834480692 59.81325887191887 208472.57695388448 0.003960759255681869 0.004259623852970222 1.7038551661763582e-09 8.76856732459497 0.0759845244262114 GQLTKS(ph)PLAQMEEERR ddPTM_A549_MK2206_60min_R1 2 GQLTKSPLAQMEEERR 16 2 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 G3V1Q4 SEPT7 Septin-7 1 GQLT(0.043)KS(0.957)PLAQMEEERR;GQLT(0.085)KS(0.915)PLAQMEEERR 69.763 0.00061532 78597000.0 6469.8 7914.6 7871.1 7046.3 9895.4 6472.9 7314.3 5562.3 12203.9 14341.6 15589.9 True False 7561.744068576665 8317.419334010141 8987.340336843678 8772.643816320422 8439.799768357116 7157.857981636727 8643.213632167262 6350.773058829327 9439.736135623709 11101.822599326219 11718.497570648778 0.6452827269868197 0.7097684053664619 0.7669362290396503 0.7486150646387629 0.7202117607206072 0.6108170384883599 0.7375701176758227 0.5419443081795788 0.8055415021177574 0.9473759355578875 1.0 13.516499993139043 -9.6712453501636 0.916913918443734 0.9704024584367639 0.6929567962025942 0.6944612911410051 0.0709230794857422 0.18957900533081518 0.3335118894286549 0.023928277354719342 0.015037008357393728 2.1318402118679157e-10 9.6712453501636 -0.27744566223416967 GQLTKS(ph)PLAQMEEERR ddPTM_A549_PD325901_60min_R1 4 GQLTKSPLAQMEEERR 16 2 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 G3V1Q4 SEPT7 Septin-7 1 GQLT(0.231)KS(0.769)PLAQMEEERR;GQLT(0.051)KS(0.949)PLAQMEEERR;GQLT(0.288)KS(0.712)PLAQMEEERR;GQLT(0.013)KS(0.987)PLAQMEEERR 135.18 5.0248e-11 287486000.0 9956.4 9796.8 10047.7 10705.4 11518.199999999999 11199.7 11370.800000000001 12608.599999999999 12304.1 11372.7 13539.100000000002 True False 10967.166398485713 10622.410717872592 10729.597343728443 11366.648244272568 10709.201367632832 11108.493356448704 11803.522016340508 12357.111581744643 11787.00146566032 10654.625781122872 11873.876531426231 0.9236382380648177 0.8946034338287565 0.9036305300405256 0.9572819975168854 0.9019128116490946 0.9355405816329814 0.9940748486899357 1.0406973282094898 0.9926835127907907 0.8973165379413871 1.0 13.535503396216942 -7.707458354660583 3.6542294411729808 1.0005731289397595 0.9168278956259568 0.41983498166856603 0.03685087601923734 0.07292541423187007 1.9928889901801827 0.003062841588322626 0.004551343271714199 1.961289238284568e-08 7.707458354660583 -0.08374523331380268 GQNQDYR ddPTM_A549_PD325901_60min_R1 1 GQNQDYR 7 0 P19338;H7BY16 P19338 NCL Nucleolin 0 78.324 0.046606 14319000.0 4284.1 4016.7 4714.0 3961.6 4535.5 4679.0 3896.9 3776.0 4703.6 4708.7 4620.5 False True 4719.018678212268 4355.201405609876 5033.920387584808 4206.299034553608 4216.942126625577 4640.895775317505 4045.1986619655036 3700.6847177853037 4505.924049209608 4411.3918784082325 4052.2077917627407 1.1645549588560116 1.0747724769847824 1.242266104373442 1.0380264909178896 1.0406529830966973 1.1452758628892228 0.9982702935887233 0.9132514688185519 1.1119676681855195 1.088639108630025 1.0 11.984492440158332 -6.298769819578916 24.275270096028848 1.0449874870486506 1.1519553436802286 0.3670431614917139 0.06898586436296028 348.79613525844576 226814.9759047012 0.010008632085043904 0.023258687908325158 5.026089066905659e-07 6.298769819578916 0.10696785663157793 GQPEGPLPS(ph)SSPR ddPTM_A549_PD325901_60min_R1 1 GQPEGPLPSSSPR 13 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 GQPEGPLPS(0.727)S(0.137)S(0.137)PR 58.699 0.010920000000000001 57115000.0 4756.5 5408.4 6251.3 6701.4 7361.2 7298.9 5843.9 6039.1 6443.2 6766.0 7672.2 True False 5239.376378449772 5864.18484878145 6675.550810120681 7115.330258016348 6844.174706761375 7239.460178342581 6066.29281240478 5918.645412917697 6172.414710831562 6338.793605307218 6728.56803808291 0.7786762872568893 0.8715353423775828 0.9921205778611202 1.0574806136676347 1.017181466847648 1.0759288064515482 0.9015726344848222 0.8796292731854467 0.9173444744701124 0.9420717111620758 1.0 12.716083790363971 -5.525469464347891 3.161213041144002 0.9701254491522555 0.7856760658474462 0.5090223532404654 0.059796052568132474 0.1788721658181587 3.4163647398854518 0.009215590486372596 0.05923401440942735 2.9821572188238162e-06 5.525469464347891 -0.1844493833048093 GQPEGPLPSSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GQPEGPLPSSSPR 13 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 GQPEGPLPS(0.037)S(0.276)S(0.688)PR;GQPEGPLPSS(0.004)S(0.996)PR 147.39 1.4073e-12 62273000.0 3636.3 4309.9 3746.3 4637.3 6630.9 5356.4 4230.7 5297.3 7702.5 7582.6 7669.5 True False 4250.0185410005415 4529.255500928703 4277.581672690914 5773.438708176307 5655.503393900112 5923.210692709441 4999.363426932182 6048.20849730087 5957.896048365001 5869.685393655592 5764.951482568254 0.7372167057869465 0.7856537066485328 0.7419978616689547 1.0014722111077112 0.9810149159105529 1.027451958723282 0.8671995665616589 1.0491343275982656 1.0334685498013578 1.0181673534294307 1.0 12.493092750968845 -6.264289253097671 24.714530088633698 1.0054652468677523 0.7580258419253112 0.8385440833253553 0.04724229578725404 54.8067756030682 475295.5526910242 0.00650993560909718 0.015770058028302978 5.441401185536333e-07 6.264289253097671 -0.2474394049424411 GQPEGPLPSSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GQPEGPLPSSSPR 13 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 GQPEGPLPSS(0.018)S(0.981)PR 151.18 6.0045e-13 53341000.0 9692.6 11188.0 11102.0 10538.0 12302.0 12674.0 9700.3 12367.0 11288.0 12623.0 12055.0 True False 10676.585616685003 12130.852024289417 11855.448481749374 11188.908326465558 11437.949959596044 12570.787146051307 10069.450224707838 12120.330483276177 10813.604615077396 11825.98162574534 10572.3114229412 1.009862951399401 1.1474172050935134 1.1213676941093367 1.0583218634844964 1.0818778885737765 1.18902921444156 0.9524360210254318 1.1464220072987898 1.0228231256613012 1.1185805215767444 1.0 13.368003206966163 -8.898951537360992 0.8694578661463763 1.0037599479381252 1.094026292412881 0.0 0.07318796328201957 0.4859711983721242 0.7577185654648717 0.014763987653448026 0.014238124415628968 1.2619683489618005e-09 8.898951537360992 0.09026634447475579 GQPS(ph)PLAQVQQ ddPTM_A549_MK2206_60min_R1 1 GQPSPLAQVQQ 11 0 P45983-5;P45983-3;P45983-2 P45983-5 1 GQPS(1)PLAQVQQ 72.49600000000001 0.0019533000000000003 2817400.0 955.13 1006.2 1055.9 859.98 1398.8 858.44 759.31 1123.1 1293.8 1559.3 1956.4 True False 1116.3325933134922 1057.4112821723156 1205.642497449306 1070.6751386059693 1193.0383729791556 949.2795510136466 897.2667983321611 1282.3028643494993 1000.7563657740518 1207.0530470191172 1470.5718861068563 0.7591146028697955 0.7190476658517331 0.819846012860401 0.7280671885006856 0.8112751129341703 0.6455172711935477 0.6101482061564197 0.8719756419009381 0.6805218943926783 0.8208051972315545 1.0 10.522161594011173 -10.831562758139093 0.8917012831593017 1.0133307623317944 0.735314278972042 0.28540065569070316 0.08960568961683635 0.33080458285886744 0.42864523766722784 0.06389178685050861 0.012974914042272013 1.4737955533504862e-11 10.831562758139093 -0.2780164833597524 GQPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GQPSPR 6 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 GQPS(1)PR;GQPS(1)PR 87.181 0.038958 45242000.0 11298.3 8412.3 6150.799999999999 5036.0 3845.9 2769.5 2915.9 2984.4 3060.0 13648.400000000001 13969.5 True False 13205.17682308567 8840.450138161565 7023.07592888644 6269.82022607463 3280.173204632924 3062.5666517546856 3445.6812859790457 3407.4478393416853 2366.914885815891 10565.216960774533 10500.487611413682 1.2575774870427998 0.8419085346619797 0.6688333141074886 0.5970980070734566 0.31238294125193616 0.29165947002554216 0.32814488369413475 0.3245037721522477 0.2254099974598449 1.0061644136687988 1.0 13.358168703463182 -5.309792006850954 1.3535178374987578 0.5348101575705599 1.518137881863905 0.4260763263014825 0.2586993227575175 1.125310825534205 1.8942698924294945 0.04652669635751762 1.4719697765684043 4.900134413614905e-06 5.309792006850954 0.9833277242933451 GQPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GQPSPR 6 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 GQPS(1)PR 83.31299999999999 0.041167 34000000.0 3428.2 3590.1 3031.8 3062.4 3568.2 3247.5 2064.0 2462.4 2947.1 4263.7 5010.5 True False 3776.2283402925464 3892.6503264570465 3237.5561796944457 3251.55749278498 3317.5819416217373 3221.053436705195 2142.5466494641373 2413.2855002845695 2823.2436358163163 3994.489254352408 4394.240264176431 0.8593586406910518 0.8858528647583196 0.7367726808404794 0.7399589684007383 0.7549841934379341 0.7330171413166652 0.4875806784920291 0.5491928877805382 0.6424873165977074 0.909028413151882 1.0 12.101398038915622 -10.763609868569443 1.0710366850061028 0.9960670996917789 0.7054702792630285 0.3975345063887712 0.11449002539179327 0.3823801183715315 0.7950335173096025 0.08062118831126183 0.021642310814981598 1.7234160431007905e-11 10.763609868569443 -0.29059682042875035 GQPSSAEPEDAAGS(ph)R ddPTM_A549_MK2206_60min_R1 2 GQPSSAEPEDAAGSR 15 0 Q03169;H0YKI8 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 1 GQPSSAEPEDAAGS(1)R;GQPSSAEPEDAAGS(1)R 69.108 0.0023667 2397200.0 709.2 575.06 535.22 583.25 547.3 430.97 665.1700000000001 496.03000000000003 880.05 941.78 938.5600000000001 True False 828.8956217247162 604.3280977201462 611.1222440428238 726.146276183087 466.7928950039261 476.574959345267 786.0227789000584 566.3437715281651 680.7200801510701 729.0312439053833 705.4896490617715 1.1749224426284097 0.8566080289396736 0.8662384272477327 1.0292798443588602 0.6616580351316459 0.6755236734926764 1.114152106902472 0.8027669467317401 0.9648902447489592 1.0333691569747618 1.0 9.462481105542976 -8.966252262361055 17.02237831776989 0.9845127550563005 0.8910786371669683 0.07771935023853416 0.15396499757827345 11.962572676280603 6033.90568402613 0.025780931378218203 0.02719452937667045 1.0808059767820087e-09 8.966252262361055 -0.0934341178893322 GQPSSAEPEDAAGS(ph)R ddPTM_A549_PD325901_60min_R1 2 GQPSSAEPEDAAGSR 15 0 Q03169;H0YKI8 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 1 GQPSSAEPEDAAGS(1)R;GQPSSAEPEDAAGS(1)R 78.932 0.00047795 3394400.0 870.1600000000001 858.64 1208.35 900.27 927.4 1125.45 986.56 765.16 1087.76 914.4000000000001 856.51 True False 958.498002622065 931.0006061973417 1290.3558973988331 955.8776332384841 862.2626233563137 1116.284708341759 1024.104080666347 749.8982835435922 1042.0452299872954 856.6646279475198 751.1646998642362 1.2760157696378727 1.239409421616336 1.71780689059543 1.27252736105843 1.1479008844693541 1.4860718408938993 1.3633549085193184 0.9983140630531854 1.38723935000624 1.1404484637022365 1.0 9.552985456537144 -13.525457165256478 0.2856216632316156 7.0259399340834595e-15 1.358190256354227 0.22148321671212157 0.1782120620908739 17.264816960014315 0.47965920585886845 9.957003308462337 0.07181407744792292 2.982241673831024e-14 13.525457165256478 1.3581902563542199 GQRPETLHER ddPTM_A549_MK2206_60min_R1 1 GQRPETLHER 10 1 Q5BJF2;Q86XC5;J3KTD1 Q5BJF2 TMEM97 Transmembrane protein 97 0 57.836000000000006 0.044191 9755100.0 165.43 133.16 185.41 224.69 123.85 0.0 154.23 306.22 335.21 335.93 280.84 False True 193.35053962481646 139.937275227654 211.70392598927546 279.7390600867174 105.63182906310296 0.0 182.25159461454373 349.6276227594191 259.28547022037407 260.0431796864826 211.0996772103094 0.9159205839627588 0.6628966802646533 1.0028623860867587 1.3251515292845548 0.500388396889241 0.0 0.8633437863240995 1.6562205465198336 1.2282608559465453 1.2318502004501546 1.0 7.721780562455805 -8.01404678343773 24.964682542443914 1.1570695649927898 0.7323459207409752 0.3301384134198645 0.3487299340562653 742.264248473757 1319191.2068431021 0.05856864739298772 0.07721313751929368 9.681735562323981e-09 8.01404678343773 -0.42472364425181464 GQRPETLHER ddPTM_A549_PD325901_60min_R1 1 GQRPETLHER 10 1 Q5BJF2;Q86XC5;J3KTD1 Q5BJF2 TMEM97 Transmembrane protein 97 0 90.05 0.0023886 7582100.0 612.63 507.07 546.99 500.72 752.29 511.72 424.92 486.74 521.84 533.71 731.72 False True 674.8237466056307 549.80256846232 584.1120307180769 531.6483371823716 699.4517456596086 507.55272198022533 441.09056312514576 477.0315888598568 499.9088795474831 500.01145951648164 641.7230787552498 1.051580921656404 0.8567598496360329 0.9102244411266599 0.8284700282458437 1.0899588448904394 0.790921721195886 0.687353435972303 0.7433605002724148 0.7790102866756113 0.7791701375090854 1.0 9.325807058626117 GQS(ph)LDNLIK ddPTM_A549_PD325901_60min_R1 2 GQSLDNLIK 9 0 O95171-2;O95171 O95171-2 SCEL Sciellin 1 GQS(1)LDNLIK;GQS(1)LDNLIK 119.45 0.00015245 6938100.0 4101.0 3848.3 4248.799999999999 3679.4 4701.1 4142.1 4398.3 4110.0 4139.4 4978.799999999999 5183.200000000001 True False 4517.330501003367 4172.609746610026 4537.149118109953 3906.668181476312 4370.910953914564 4108.3681109088775 4565.679713342111 4028.0228257673734 3965.435413151253 4664.4377183126735 4545.699259011934 0.9937592092234598 0.917924725956683 0.9981190702651455 0.8594207313058093 0.9615486429836181 0.90379232694815 1.004395463314157 0.8861173157862879 0.8723488262646727 1.026121054767391 1.0 12.150286524056671 GQS(ph)PAGDGSPEPPTPR ddPTM_A549_MK2206_60min_R1 2 GQSPAGDGSPEPPTPR 16 0 A0A0A0MRW6;Q9H6R4-2;Q9H6R4-4;Q9H6R4;Q9H6R4-3 A0A0A0MRW6 NOL6 Nucleolar protein 6 1 GQS(1)PAGDGSPEPPTPR;GQS(0.995)PAGDGS(0.005)PEPPTPR 149.22 1.2464e-14 15495600.0 3620.2000000000003 3459.8 3114.8 2955.0 4466.799999999999 3172.5 3461.2 3900.2 4460.700000000001 5361.6 6227.799999999999 True False 4231.201254607754 3635.8890419993813 3556.525476896579 3678.9751326549917 3809.739637134181 3508.211844264935 4090.055237501517 4453.065293861558 3450.3585722741645 4150.41083620708 4681.265381464053 0.9038584463426549 0.776689366169253 0.759735923320862 0.7858933072289105 0.813826887964787 0.7494152880449926 0.873707193293614 0.9512524779077733 0.73705681928143 0.88660020272319 1.0 12.192682838575362 -10.953390518041685 1.1003743623607407 1.0048408151475552 0.8093292994786265 0.26664770384031833 0.07221747423277568 0.3426495802613337 0.7062607624389823 0.05358591687179837 0.011246635279815302 1.113293009162441e-11 10.953390518041685 -0.19551151566892866 GQS(ph)PAGDGSPEPPTPR ddPTM_A549_PD325901_60min_R1 2 GQSPAGDGSPEPPTPR 16 0 A0A0A0MRW6;Q9H6R4-2;Q9H6R4-4;Q9H6R4;Q9H6R4-3 A0A0A0MRW6 NOL6 Nucleolar protein 6 1 GQS(0.989)PAGDGS(0.011)PEPPTPR;GQS(0.992)PAGDGS(0.008)PEPPTPR 142.55 2.9812e-14 19754300.0 4850.2 4570.4 4746.1 5043.1 4570.5 5100.1 4267.4 5160.5 4521.0 4620.2 6348.1 True False 5342.588733471474 4955.563647820197 5068.198886617791 5354.600833288903 4249.483847369022 5058.566476532767 4429.7982422108835 5057.569779166068 4330.998092201 4328.479783511732 5567.323943921445 0.9596331715715335 0.890115915247004 0.9103474016724655 0.9617907790573605 0.7632902073192137 0.9086172328908303 0.7956781906049238 0.9084382065979939 0.7779317560512535 0.777479418677924 1.0 12.44276831589743 -2.5507702340133025 0.8364741587357223 0.8831590808978484 9.178489441085137 0.08125871170716281 0.0773732341654982 553.5942565568207 4.36403123446267 0.013715330691588963 8576.45412056606 0.0028133888762567846 2.5507702340133025 8.29533036018729 GQS(ph)PLPR ddPTM_A549_MK2206_60min_R1 1 GQSPLPR 7 0 H3BTS1;H3BN52;Q9BQ65-3;Q9BQ65-2;Q9BQ65 H3BTS1 USB1 U6 snRNA phosphodiesterase 1 GQS(1)PLPR 68.657 0.021021 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GQS(ph)PLPR ddPTM_A549_PD325901_60min_R1 2 GQSPLPR 7 0 H3BTS1;H3BN52;Q9BQ65-3;Q9BQ65-2;Q9BQ65 H3BTS1 USB1 U6 snRNA phosphodiesterase 1 GQS(1)PLPR;GQS(1)PLPR 76.572 0.017619 25366000.0 7272.2 7823.400000000001 8497.1 8566.5 8714.0 9492.6 8902.2 8999.2 8537.8 9502.5 10469.0 True False 8010.468390489309 8482.705374224688 9073.764303213164 9095.633249066914 8101.958701668016 9415.295412861498 9240.978092470754 8819.703896264176 8178.985956999268 8902.5105282932 9181.37936845885 0.8724689470961174 0.9239031559207384 0.9882789871840628 0.990660867397931 0.8824337146443365 1.0254772224319832 1.0064912603673306 0.9606077194198998 0.8908232226082342 0.9696266945331047 1.0 13.164495198491018 -5.424310435589566 3.463233744808565 0.9577169704594427 0.8733828707481602 0.2798669215699956 0.04389239632298141 0.3246883568839975 6.526230640880389 0.0070641196534511515 0.054565285410367745 3.7643462568022543e-06 5.424310435589566 -0.08433409971128247 GQS(ph)PNKR ddPTM_A549_PD325901_60min_R1 1 GQSPNKR 7 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 GQS(1)PNKR 64.04 0.010906 14161000.0 4039.5 4149.9 3391.5 3632.1 3378.7 2903.7 1984.3 2687.7 2942.3 4031.5 5102.6 True False 4449.587066277274 4499.626637075318 3621.6675847462625 3856.4465679024056 3141.391767882228 2880.0532299186666 2059.8136223506244 2634.0917150401383 2818.645363123867 3776.950401979906 4475.012548046437 0.9943183440278258 1.0055003396671205 0.8093089227933671 0.8617733529229844 0.701985018847288 0.643585509313477 0.4602922562194456 0.5886221964204433 0.6298631194574738 0.8440088963837054 1.0 12.127676012397414 -5.883178710700436 1.5882119125655443 0.7570149228031642 1.0219216862880334 0.33759336707473064 0.14366618251028546 0.6051680746165918 2.675712905604491 0.028076014065770198 0.17181733753443593 1.308643309922465e-06 5.883178710700436 0.2649067634848692 GQS(ph)PPSKDGSGDYQSR ddPTM_A549_MK2206_60min_R1 1 GQSPPSKDGSGDYQSR 16 1 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GQS(0.996)PPS(0.003)KDGS(0.001)GDYQSR 81.35600000000001 6.9146e-05 11992000.0 1760.0 1627.2 1606.7 1342.9 1849.0 1438.1 1296.4 1581.6 2195.6 2168.6 2287.7 True False 2057.044972131276 1710.017529666857 1834.5542197668353 1671.9105602850714 1577.014549355489 1590.2787874664796 1531.939099126593 1805.7966434468597 1698.300105652734 1678.7117538418897 1719.6009526920134 1.1962339104959197 0.9944269494558294 1.0668488040175041 0.9722665934022173 0.9170816908926998 0.9247952468140462 0.8908689523161533 1.0501254030011486 0.9876129127481971 0.9762216933026746 1.0 10.747858099376971 GQS(ph)PPSKDGSGDYQSR ddPTM_A549_PD325901_60min_R1 1 GQSPPSKDGSGDYQSR 16 1 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GQS(0.965)PPS(0.031)KDGS(0.001)GDY(0.002)QS(0.001)R 58.49 0.0019065999999999998 26208000.0 2235.2 2365.3 2345.0 2541.5 2570.7 2599.3 2317.0 2362.0 2521.5 2812.4 2785.0 True False 2462.1158585327275 2564.6321320210727 2504.1458016305423 2698.482682834712 2390.142900433551 2578.132162595169 2405.1747029110484 2314.8880570468455 2415.5301237524495 2634.8245840328145 2442.4626555695754 1.00804647019611 1.0500189741582795 1.0252544889152388 1.1048204469703278 0.9785790972006392 1.0555461950323888 0.9847334604795291 0.9477680454062132 0.9889732063023722 1.0787573672926356 1.0 11.254120788703668 -7.771183704950763 24.973741252174158 0.9896997757039652 1.0375213649893729 0.1419369516211254 0.04191387404273838 163.48212452394117 418987.77893606975 0.00474523657348159 0.006600834118172727 1.693621253417798e-08 7.771183704950763 0.047821589285407695 GQS(ph)SPQR ddPTM_A549_PD325901_60min_R1 1 GQSSPQR 7 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GQS(0.775)S(0.225)PQR 54.157 0.043148 5321100.0 544.51 602.81 306.93 442.29 524.94 435.4 230.7 409.96 377.49 594.88 607.28 True False 599.7882543529245 653.6109142618786 327.76011552002655 469.6092487865299 488.0700253446875 431.8542467564097 239.47941474388392 401.7830261926014 361.62540805683597 557.3191752771439 532.5884098650959 1.1261759423282423 1.227234581442427 0.6154097788253557 0.881748907952168 0.9164112780229581 0.8108592653486356 0.44965194568267797 0.7543968639767672 0.6789960152314155 1.0464350424341986 1.0 9.056877222881853 -5.747726388926443 24.998355160585497 0.8053405091046402 1.1767054724594046 0.44155438732366303 0.165275833779004 173.4270954793607 316146.59359512577 0.023727872952132852 0.09091964176694907 1.7876134394714884e-06 5.747726388926443 0.37136496335476443 GQSLDNLIKVT(ph)PEVK ddPTM_A549_PD325901_60min_R1 1 GQSLDNLIKVTPEVK 15 1 O95171-2;O95171 O95171-2 SCEL Sciellin 1 GQS(0.002)LDNLIKVT(0.998)PEVK 50.883 0.0089115 1549700.0 1902.5 1536.2 2048.8 1760.3 1720.9 2135.4 1594.6 2008.7 1947.5 2202.2 2080.6 True False 2095.640399453523 1665.6609652943698 2187.843888435247 1869.0297330686394 1600.029920782705 2118.010010389614 1655.283375598601 1968.6349027053354 1865.6533476136794 2063.1527161701956 1824.6993900100754 1.1484852852622216 0.9128413011006556 1.199016068297785 1.0242946006894424 0.8768731603367665 1.1607446256547052 0.9071540137849561 1.078881767310979 1.0224442216771816 1.1306808822678478 1.0 10.833443091523925 -6.5005104378829515 24.6975870880488 1.0096834208878924 1.0764316580639532 0.05063320612061695 0.10341276667076357 1171.0925052932569 1293041.4038281473 0.01185716197493882 0.02734246988426901 3.1585631342457557e-07 6.5005104378829515 0.06674823717606082 GQSPPSKDGS(ph)GDYQSR ddPTM_A549_PD325901_60min_R1 1 GQSPPSKDGSGDYQSR 16 1 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GQS(0.27)PPS(0.213)KDGS(0.508)GDYQS(0.008)R 70.414 0.00039389 15428000.0 7274.9 6830.9 6226.6 5975.5 7510.1 6594.4 7037.1 7390.0 6931.7 7258.6 9311.1 True False 8013.44249250168 7406.563916045634 6649.174519587515 6344.593063654862 6982.616484438484 6540.697392766354 7304.900691348875 7242.600652657148 6640.38475463607 6800.290757239572 8165.893727925989 0.9813307348217194 0.9070120384638887 0.8142617013063067 0.7769624826193141 0.8550951943642255 0.8009775305302179 0.8945623020254767 0.8869330037799374 0.8131853016807048 0.8327674818965273 1.0 12.995395076913884 -10.87015116628201 1.0046635024924797 1.004026350299254 0.8535756519152272 0.0 0.07376376373052855 0.40977440730740106 0.7011620924611864 0.04580769295086595 0.0099353604083102 1.3484934264346045e-11 10.87015116628201 -0.1504506983840267 GQSQLS(ph)NPTDDSWK ddPTM_A549_MK2206_60min_R1 2 GQSQLSNPTDDSWK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GQS(0.004)QLS(0.907)NPT(0.082)DDS(0.007)WK;GQS(0.017)QLS(0.963)NPT(0.02)DDSWK 174.59 9.186e-23 16544300.0 9321.7 8438.099999999999 6765.1 5630.2 13496.8 10452.5 10351.9 10397.5 14693.6 13726.7 14116.0 True False 10894.975066315968 8867.563247960854 7724.492906046319 7009.599252749286 11511.438599102848 11558.576612192046 12232.706232835993 11871.377466008302 11365.523060857635 10625.828936392814 10610.607618219363 1.0268002981854047 0.8357262436822613 0.7279972254164477 0.6606218517319571 1.0848990946886659 1.089341631326083 1.1528751861327284 1.1188216446364565 1.0711472396116142 1.0014345378437437 1.0 13.373219654340469 -6.779729532781217 24.999913184328417 1.057298127508388 0.8083685850155161 0.6365509554334003 0.09441393816106144 123.9251833395249 169387.04547044358 0.014241850892802511 0.02695041883759947 1.6606207765591678e-07 6.779729532781217 -0.2489295424928718 GQSQLS(ph)NPTDDSWK ddPTM_A549_PD325901_60min_R1 2 GQSQLSNPTDDSWK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GQSQLS(0.992)NPT(0.008)DDSWK;GQS(0.001)QLS(0.804)NPT(0.184)DDS(0.011)WK 223.76 6.3856e-47 27731000.0 14458.2 11489.4 11349.2 12272.0 11743.900000000001 12595.599999999999 9802.7 8807.4 16131.0 14468.1 18931.199999999997 True False 15925.985820435706 12457.652060052807 12119.42496028373 13030.013568265824 10919.048978255565 12493.025609657869 10175.747112743262 8631.729497728358 15453.070167063554 13554.5816968586 16602.78241476436 0.959235953503384 0.7503351997779956 0.7299634878974435 0.784809030363406 0.6576638002884132 0.7524657793833517 0.6128940835660337 0.5198965620396506 0.930751833097662 0.8164042241982835 1.0 14.01913741868798 -8.92468204526272 9.56230014603086 0.9695564502145776 0.7196065015351405 0.34529591595875386 0.1141416849838154 0.1861514514910504 22.086303074131866 0.0183764199725212 0.019526472006937943 1.1893726697128714e-09 8.92468204526272 -0.2499499486794371 GQSQT(ph)SPDHR ddPTM_A549_PD325901_60min_R1 1 GQSQTSPDHR 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GQS(0.007)QT(0.759)S(0.234)PDHR 113.47 0.00011308 50645000.0 761.58 771.91 617.89 589.7 685.19 630.58 434.01 550.67 709.58 790.16 721.14 True False 838.8950409544366 836.9615647183807 659.8237310744117 626.1244296941296 637.0646181771756 625.4447655481326 450.5264880493847 539.6864548577416 679.7588202309194 740.2691627504505 632.4443516831037 1.3264329718842651 1.3233758234870814 1.0432913651903826 0.9900071492896488 1.0073054119018947 0.9889324869194526 0.712357517069151 0.8533342948221319 1.074812065949991 1.1704890094763216 1.0 9.304794733482444 -5.797811434517595 3.966370847269737 0.9929223870811031 1.3327602778386083 0.5851628496715444 0.1116143230632608 0.10993369807557109 3.638271806159844 0.01552619817875793 0.057943854979490735 1.5929001951863026e-06 5.797811434517595 0.33983789075750515 GQSQT(ph)SPDHRS(ph)DTS(ph)SPEVR ddPTM_A549_PD325901_60min_R1 1 GQSQTSPDHRSDTSSPEVR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 GQS(0.062)QT(0.506)S(0.445)PDHRS(0.981)DT(0.099)S(0.539)S(0.367)PEVR 108.44 4.0639000000000003e-10 25534000.0 921.34 911.47 943.64 955.5 1424.3 1215.3 1077.1 1187.5 876.48 1321.4 1396.3 True False 1014.8737585453397 988.2827757042437 1007.6810849682913 1014.5190649020528 1324.2620815682528 1205.4029997314306 1118.0896299117355 1163.8143809242713 839.644593641303 1237.9665784884648 1224.5639518749733 0.8287633789900727 0.8070487247244612 0.8228897179484951 0.8284737300560634 1.0814152086876543 0.9843528366859038 0.9130512360745136 0.9503908547547181 0.6856682269273837 1.0109448155753484 1.0 10.258052404128417 -6.555469265760458 24.999159254056462 0.8868026146430882 0.8195425993660403 0.10821568908765522 0.1049046584097097 500.3389231658985 383792.73198371707 0.019353193160503847 0.04028709738139976 2.7831123227381926e-07 6.555469265760458 -0.06726001527704784 GQSQTS(ph)PDHR ddPTM_A549_MK2206_60min_R1 3 GQSQTSPDHR 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GQSQT(0.116)S(0.884)PDHR;GQS(0.005)QT(0.146)S(0.849)PDHR;GQS(0.006)QT(0.1)S(0.894)PDHR 102.4 0.00039957 133854000.0 1863.73 1319.6399999999999 1108.42 849.56 1478.6100000000001 1312.34 1710.96 1746.44 1624.42 2428.25 2948.0 True False 2178.2820601762637 1386.8040393618303 1265.6106231866286 1057.7022381381971 1261.1084277028226 1451.2109477392105 2021.8192849750365 1994.0032182481873 1256.4914636657013 1879.7066385071332 2215.9302393390985 0.9830102146292912 0.6258337987099472 0.5711419072308418 0.47731748019904136 0.5691101666083804 0.6548992030417141 0.9124020463649813 0.899849274516376 0.5670266334920588 0.8482697718262809 1.0 11.113696748655816 -7.635093647610818 7.3503124044966235 0.8076095448305962 0.6290427890942513 0.2674563592407596 0.1570727671420057 0.3285050787303186 20.138400703756997 0.02995100256105813 0.04447358600133952 2.3168950003413345e-08 7.635093647610818 -0.17856675573634495 GQSQTS(ph)PDHR ddPTM_A549_PD325901_60min_R1 3 GQSQTSPDHR 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GQSQT(0.043)S(0.957)PDHR;GQS(0.001)QT(0.077)S(0.921)PDHR;GQSQT(0.009)S(0.991)PDHR 115.57 8.73e-05 225132000.0 1829.1 1943.3200000000002 1659.93 1394.81 2039.85 1632.0 1273.69 1431.06 1540.31 2241.62 2582.66 True False 2014.7888854877483 2107.0903964821327 1772.5828317699716 1480.9642458566532 1896.5779731004702 1618.7095330878751 1322.1609699399107 1402.5163856551485 1475.5761272723125 2100.083730642738 2265.009192830637 0.8895279064937559 0.9302789600817694 0.782594100448101 0.6538446954406645 0.8373378700199758 0.7146591449657361 0.583733158401699 0.6192100191445093 0.6514658447934374 0.9271855219352166 1.0 11.145301190308546 -10.856616611368707 1.137464754764126 0.9980494650338746 0.7329232226479608 0.38102708827971454 0.10844810046628406 0.3868228909329664 0.8988301943384428 0.07928379348068104 0.019897128518516414 1.3911802022344498e-11 10.856616611368707 -0.26512624238591376 GQSQTS(ph)PDHRS(ph)DT(ph)SSPEVR ddPTM_A549_MK2206_60min_R1 1 GQSQTSPDHRSDTSSPEVR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 GQS(0.064)QT(0.455)S(0.483)PDHRS(0.519)DT(0.519)S(0.508)S(0.45)PEVR 41.208 0.035882 13923000.0 0.0 0.0 111.07 157.13 240.74 0.0 131.44 0.0 0.0 214.62 295.36 True False 0.0 0.0 126.82139614707309 195.62685705383373 205.32746490634966 0.0 155.3209466130819 0.0 0.0 166.13719293993645 222.01396047869588 0.0 0.0 0.5712316282887205 0.8811466478595872 0.9248403319486415 0.0 0.6995999092948313 0.0 0.0 0.7483186759144307 1.0 7.794506587431794 -10.994766592992752 1.2970616466564602 0.996788199052491 0.32437946895826947 0.23430251785401313 0.3628027175588969 0.4542890938686266 1.3708245240689345 0.26479849689791646 0.06177221002060924 1.0121232631305365e-11 10.994766592992752 -0.6724087300942216 GQSQTS(ph)PDHRS(ph)DT(ph)SSPEVR ddPTM_A549_PD325901_60min_R1 1 GQSQTSPDHRSDTSSPEVR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 GQS(0.059)QT(0.492)S(0.526)PDHRS(0.876)DT(0.388)S(0.362)S(0.296)PEVR 63.696999999999996 0.00092966 27290000.0 709.51 734.84 705.9 599.98 620.29 772.29 624.38 860.12 1055.3 740.79 787.96 True False 781.5389328863444 796.7675457212039 753.8066189215346 637.0394019465559 576.7229702843305 766.0007262919333 648.141122573846 842.9642318489136 1010.9494109046044 694.0163929759879 691.0459152899836 1.1309508031147064 1.152987852314931 1.0908198749792404 0.9218481548787321 0.834565341497345 1.1084657464048486 0.9379132532776301 1.2198382382380202 1.4629265415459112 1.0042985243386582 1.0 9.43263776082307 -8.282238855396603 20.674096825466776 1.2248049261455833 1.024666969367512 0.14799626550715173 0.1505397617489963 108.26850113068251 107615.24274118632 0.03098319578859919 0.037502330958746694 5.221089579896955e-09 8.282238855396603 -0.20013795677807145 GQSS(ph)PPPAPPICLR ddPTM_A549_MK2206_60min_R1 2 GQSSPPPAPPICLR 14 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 GQS(0.061)S(0.939)PPPAPPICLR;GQS(0.008)S(0.992)PPPAPPICLR 123.64 1.1904e-06 9992400.0 4887.0 5643.9 5124.5 4639.1 6433.700000000001 5400.9 5010.9 5175.3 7939.700000000001 6644.9 8386.3 True False 5711.806124321332 5931.150402954015 5851.231156529 5775.679708257116 5487.311252670852 5972.419653172735 5921.3156678598025 5908.914623691538 6141.370627095563 5143.81247491652 6303.750259894664 0.90609651220808 0.9408923511276801 0.9282143034370106 0.9162291445780766 0.8704836052249546 0.9474391286041421 0.9393322107844336 0.9373649621376777 0.9742407890375697 0.8159924271813511 1.0 12.621994664324953 -8.718608128563352 0.7802256625988372 0.9943363085874932 0.9165746604794178 0.0 0.05704488786441668 0.2070404016288124 0.2591960904990723 0.004934079033846534 0.005179599556612101 1.9115773299689133e-09 8.718608128563352 -0.0777616481080754 GQSS(ph)PPPAPPICLR ddPTM_A549_PD325901_60min_R1 2 GQSSPPPAPPICLR 14 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 GQS(0.186)S(0.814)PPPAPPICLR;GQS(0.49)S(0.51)PPPAPPICLR 135.37 4.9708e-09 15989300.0 6073.700000000001 6219.3 6615.8 6225.6 6067.200000000001 5330.8 6182.9 7147.1 5477.6 6642.0 6708.1 True False 6690.297552778379 6743.42223763525 7064.787972037243 6610.14117263655 5641.060802703716 5287.387732221108 6418.193642912697 7004.545483708515 5247.395520867111 6222.622986469187 5883.046226149473 1.137216553397246 1.1462466855455773 1.200872422289504 1.1235915745919558 0.9588673258472525 0.8987499892010485 1.0909643399340556 1.1906324061460039 0.8919521144578184 1.057721246317993 1.0 12.52234765696202 -6.6887542285504535 4.647583172257592 0.9740509047538999 1.1596464430410345 0.3217331093818976 0.08718136386827448 0.14688789206728575 5.9802716922182135 0.01340713975712539 0.028275534986201792 2.0476030672986332e-07 6.6887542285504535 0.1855955382871346 GQT(ph)PEAGADKR ddPTM_A549_MK2206_60min_R1 1 GQTPEAGADKR 11 1 Q07617 Q07617 SPAG1 Sperm-associated antigen 1 1 GQT(1)PEAGADKR 42.317 0.049048 5467700.0 1535.8 1504.5 1271.0 1368.9 2057.3 1250.7 1518.6 1679.2 2725.9 2241.9 2219.8 True False 1795.0054932950084 1581.0726237609308 1451.246911883766 1704.2805614522554 1754.6738952888306 1383.0482438525319 1794.5099629232054 1917.231742334325 2108.488002367823 1735.4532329328285 1668.562396636679 1.075779663327665 0.9475657769514035 0.8697588503786517 1.0214065502660095 1.051608198066627 0.8288861397334268 1.0754826829014 1.1490320926558628 1.2636554716910209 1.0400889031366052 1.0 10.704389922417038 -7.9873795570428205 24.69505343325038 1.1289859471742716 0.9658217946195923 0.3626914245147269 0.09240731856786479 182.6327678684432 357365.12341280264 0.017671957032073495 0.024408906193993503 1.0294859951216021e-08 7.9873795570428205 -0.1631641525546793 GQT(ph)PLTEGSEDLDGHS(ph)DPEESFAR ddPTM_A549_PD325901_60min_R1 1 GQTPLTEGSEDLDGHSDPEESFAR 24 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 2 GQT(0.992)PLT(0.005)EGS(0.004)EDLDGHS(1)DPEESFAR 172.45 6.815899999999998e-41 31627000.0 1232.2 963.89 982.07 1228.0 1286.5 953.28 975.53 1226.9 885.82 1229.3 1553.4 True False 1357.2920369023034 1045.1203930722493 1048.7191758666547 1303.8507710096499 1196.1406781840608 945.5168037389772 1012.6543279804987 1202.428517015569 848.5920659220285 1151.68178820635 1362.3416478139254 0.9962934327672321 0.7671499984965565 0.7697916139827896 0.9570659262321367 0.8780034583127088 0.694037949479263 0.7433189241519917 0.8826189223129454 0.6228922585488871 0.8453692875457417 1.0 10.41187283221018 -5.251126054272531 23.284808698276418 0.8158259044539509 0.9962936967888546 0.19131932485162784 0.10654511465180308 941.563092653261 2125689.289444648 0.019202183550958096 0.3448557942478802 5.60885155101543e-06 5.251126054272531 0.18046779233490373 GQTPEAGADKRS(ph)PR ddPTM_A549_MK2206_60min_R1 4 GQTPEAGADKRSPR 14 2 Q07617 Q07617 SPAG1 Sperm-associated antigen 1 1 GQTPEAGADKRS(1)PR;GQTPEAGADKRS(1)PR;GQTPEAGADKRS(1)PR;GQTPEAGADKRS(1)PR 126.0 8.036099999999999e-08 153103000.0 5541.6 5598.9 5470.8 5049.3099999999995 5597.700000000001 4511.23 4802.97 4560.23 6355.1 8403.599999999999 8100.200000000001 True False 6476.886600887881 5883.860095164557 6246.641703803074 6286.3911766721385 4774.2857452283515 4988.60536428788 5675.607478349319 5206.656567618657 4915.679997009335 6505.220923446323 6088.696785852974 1.063755813220468 0.9663578762594397 1.0259406772097903 1.0324690812783623 0.7841227627431466 0.8193223508647784 0.9321547250532389 0.8551348097537509 0.8073451790916684 1.0684094071757915 1.0 12.571917753880099 -6.72968278270258 24.999754126860864 0.8905966948675627 1.0184193014353007 0.35251033200707993 0.08253836130114045 175.39873580896412 138078.3748403789 0.01191471613236123 0.02480073194553289 1.863447738859489e-07 6.72968278270258 0.12782260656773803 GQTPEAGADKRS(ph)PR ddPTM_A549_PD325901_60min_R1 4 GQTPEAGADKRSPR 14 2 Q07617 Q07617 SPAG1 Sperm-associated antigen 1 1 GQTPEAGADKRS(1)PR;GQTPEAGADKRS(1)PR;GQTPEAGADKRS(1)PR;GQTPEAGADKRS(1)PR 140.28 5.5376000000000005e-11 402271000.0 12855.8 12597.9 11651.8 12014.0 14343.9 13619.4 12841.2 14124.800000000001 13128.800000000001 12656.599999999999 13755.4 True False 14160.911352060242 13659.569245333894 12442.56121596535 12756.077494226345 13336.433947768632 13508.488121897672 13329.878892974257 13843.069783308765 12577.042192631825 11857.460116011127 12063.573002664902 1.173857144059395 1.1322988008873018 1.0314159174248565 1.0574045924377848 1.105512765150304 1.119775054945461 1.104969389253882 1.1475099276351015 1.042563607801229 0.9829144411354543 1.0 13.558369649124101 -8.957221101511236 4.104882572923306 1.017719157633547 1.105627099705488 0.5667539503717215 0.03920569712995131 0.13144343438194167 4.406381306012755 0.007361851136085717 0.007611352815838368 1.1035166709655754e-09 8.957221101511236 0.08790794207194108 GQTPLT(ph)EGSEDLDGHS(ph)DPEESFAR ddPTM_A549_MK2206_60min_R1 1 GQTPLTEGSEDLDGHSDPEESFAR 24 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 2 GQT(0.084)PLT(0.708)EGS(0.208)EDLDGHS(0.995)DPEES(0.005)FAR 82.126 1.8701e-05 2701200.0 168.31 285.34 482.26 229.26 447.13 180.13 192.04 283.86 504.39 431.32 473.01 True False 196.71661321557676 299.86258721431966 550.6517196892721 285.42871029187256 381.3577693095296 199.19123703938314 226.9311821939763 324.098024284791 390.1464703453192 333.8845124352501 355.5485625881231 0.553276356353769 0.8433801139049701 1.5487384217811104 0.80278403662827 1.0725898215803071 0.5602363727458843 0.6382565029713237 0.9115436212865098 1.0973085294041118 0.9390686605644664 1.0 8.473902813529964 -8.649872075349496 5.960523104195726 1.0456036649869809 0.8733276989336286 0.05351669559265981 0.2652432402617376 0.4326980746603609 21.299012574330153 0.045268160810981416 0.05128631488276437 2.2393806675609935e-09 8.649872075349496 -0.17227596605335227 GQTPLTEGS(ph)EDLDGHS(ph)DPEESFAR ddPTM_A549_MK2206_60min_R1 2 GQTPLTEGSEDLDGHSDPEESFAR 24 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 2 GQTPLT(0.004)EGS(0.996)EDLDGHS(1)DPEESFAR;GQT(0.002)PLT(0.046)EGS(0.953)EDLDGHS(0.998)DPEES(0.002)FAR 146.94 2.6591e-28 11336800.0 672.0799999999999 637.38 495.77 535.29 853.99 389.73 809.3399999999999 594.35 1002.95 1026.26 853.18 True False 785.510673221584 669.8199195299044 566.0776408376196 666.4360740300813 728.3692022737124 430.9709699181635 956.3866017333512 678.6009326205366 775.7834263820416 794.4271532314757 641.3118594298949 1.2248497539401146 1.0444527255824525 0.8826869993342147 1.0391762825382973 1.1357488428815408 0.672014658049958 1.491297233429532 1.058144992396976 1.2096820212738426 1.2387532548325166 1.0 9.324882276168422 -7.751245017244478 24.999432764288255 1.1245624742067921 1.0044934220822352 0.17932307708256368 0.18307227454846453 402.1346489826525 986143.2065851573 0.027173628696649563 0.04004867334730062 1.773188813292574e-08 7.751245017244478 -0.12006905212455687 GQTPLTEGS(ph)EDLDGHS(ph)DPEESFAR ddPTM_A549_PD325901_60min_R1 2 GQTPLTEGSEDLDGHSDPEESFAR 24 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 2 GQTPLT(0.005)EGS(0.995)EDLDGHS(0.975)DPEES(0.025)FAR;GQT(0.078)PLT(0.013)EGS(0.909)EDLDGHS(0.633)DPEES(0.367)FAR 149.74 1.6039e-28 38052200.0 1105.16 971.75 943.56 1120.4299999999998 1119.76 1443.31 1342.25 1133.05 959.15 1289.3799999999999 1435.7 True False 1217.3550296242079 1053.6427828569217 1007.5956556872131 1189.6364164188465 1041.1119205622877 1431.5561618879058 1393.3300582573825 1110.4504288894702 918.8402610339722 1207.9683267530322 1259.1180016521516 0.9668315662446693 0.8368101968793905 0.8002392582467224 0.9448172568876508 0.8268581016204937 1.1369515486312558 1.10659211958619 0.8819272120900445 0.7297491258391318 0.9593765835831086 1.0 10.298197780126369 -5.2014313567151875 19.481507400380554 0.8974290384300303 0.9668389918313063 0.0 0.1221704435022121 14890.380765573103 4831476.275434558 0.01936785455701457 24.038774669829188 6.288812453488267e-06 5.2014313567151875 0.06940995340127598 GQTPLTEGS(ph)EDLDGHSDPEESFAR ddPTM_A549_MK2206_60min_R1 1 GQTPLTEGSEDLDGHSDPEESFAR 24 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 1 GQT(0.151)PLT(0.151)EGS(0.555)EDLDGHS(0.143)DPEES(0.001)FAR 67.95100000000001 6.476600000000001e-05 25400000.0 246.3 142.83 283.87 199.86 253.56 204.84 125.02 135.52 449.65 312.82 239.99 True False 287.86941854314404 150.09943692374455 324.1270345211997 248.82570897205628 216.26165988890085 226.51603283821262 147.73451571490799 154.73037501259384 347.80499294350176 242.15374473707462 180.39385961295454 1.595782800815862 0.8320651115608456 1.7967742095913517 1.3793468885577715 1.1988304943023158 1.255674851262764 0.8189553459961494 0.8577363738686938 1.928031218411411 1.3423613489762316 1.0 7.495006421623519 -8.737823632303492 24.99979748724171 1.4382372537550463 1.2162383361680418 0.06258368669322723 0.35478905536776634 582.5308928482466 616671.3141421023 0.07262692345829486 0.0823283358747427 1.8288427613824578e-09 8.737823632303492 -0.22199891758700452 GQTPLTEGS(ph)EDLDGHSDPEESFAR ddPTM_A549_PD325901_60min_R1 3 GQTPLTEGSEDLDGHSDPEESFAR 24 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 1 GQT(0.006)PLT(0.11)EGS(0.441)EDLDGHS(0.441)DPEES(0.002)FAR;GQT(0.001)PLT(0.032)EGS(0.943)EDLDGHS(0.024)DPEESFAR;GQT(0.001)PLT(0.201)EGS(0.743)EDLDGHS(0.056)DPEESFAR 99.93 2.6082e-09 44444800.0 895.0999999999999 824.9300000000001 1015.9300000000001 1021.6 1122.8 1106.67 1004.35 1021.38 987.04 1635.38 844.6899999999999 True False 985.969893062207 894.4497461920869 1084.877119083376 1084.7019117780612 1043.9384014497184 1097.6576464352695 1042.5710888514086 1001.0077746428905 945.5581413240601 1532.1218277043035 740.7984849310831 1.3309556014466368 1.2074130338904487 1.4644699485100903 1.4642334370850822 1.4092069877098043 1.4817223155327932 1.4073612595851888 1.3512551591355033 1.2764039891523618 2.068203241326604 1.0 9.532937337799645 -9.86576151139622 0.6202151196112529 1.0075527686963248 1.3982567106317785 0.0 0.32338893706108185 0.2585108636657055 0.20460923154745075 0.04628733990969128 0.019613862941020698 1.362192511925494e-10 9.86576151139622 0.39070394193545366 GQTPLTEGSEDLDGHS(ph)DPEESFAR ddPTM_A549_MK2206_60min_R1 1 GQTPLTEGSEDLDGHSDPEESFAR 24 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 1 GQTPLT(0.001)EGS(0.005)EDLDGHS(0.99)DPEES(0.004)FAR 115.54 3.0705e-16 25086000.0 405.6 753.38 647.58 436.47 891.48 432.69 421.69 667.16 994.58 1160.2 1207.7 True False 474.05536403207117 791.7238240538446 739.4165815874813 543.4051695938832 760.344472936415 478.47696860362373 498.3056145562271 761.7319730918106 769.3092180178977 898.1100142061058 907.7947591756538 0.5222054426295094 0.872139672598231 0.8145195531409847 0.5985991482120211 0.8375731025665594 0.5270761521449154 0.5489188051809489 0.839101531918427 0.8474484020115831 0.9893315698601934 1.0 9.826222349197128 -9.048216752360121 1.0684964532082675 0.957117524426118 0.6903288828196654 0.47091386660848755 0.1254017164983499 0.2937887233420231 0.6911196834531665 0.029593008589908334 0.0273286812196365 8.949180087696528e-10 9.048216752360121 -0.26678864160645255 GQVS(ph)EGGQLR ddPTM_A549_PD325901_60min_R1 2 GQVSEGGQLR 10 0 A0A2R8Y871;Q96L92-3;Q96L92 A0A2R8Y871 SNX27 Sorting nexin-27 1 GQVS(1)EGGQLR;GQVS(1)EGGQLR 78.903 0.0012981 6559900.0 1543.3899999999999 1498.67 1679.88 1553.8899999999999 1758.74 1737.68 1629.35 1649.43 1716.63 1581.75 1845.41 True False 1700.0738166163326 1624.9681804828233 1793.886758739069 1649.8702561597606 1635.2121697236175 1723.528910205967 1691.3558058645317 1616.5308246971965 1644.4860108416296 1481.878035056857 1618.4362690178293 1.0504422380796286 1.004035939869883 1.1084074134273536 1.0194224435918058 1.01036549972769 1.0649346799747108 1.045055550374532 0.9988226633590033 1.0160956241048706 0.915623347934581 1.0 10.660384840705186 -8.255198952833876 24.254187206419257 1.0071547305290303 1.042890665810147 0.2956955966073964 0.03877320623588502 317.2983082302378 1233218.7280179672 0.004172646247634074 0.005311127158949107 5.556496526119007e-09 8.255198952833876 0.03573593528111685 GQVSESEDS(ph)ITKQIESLETEMEFR ddPTM_A549_PD325901_60min_R1 1 GQVSESEDSITKQIESLETEMEFR 24 1 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVS(0.009)ES(0.188)EDS(0.643)IT(0.159)KQIESLETEMEFR 61.111999999999995 9.8055e-05 8499000.0 690.03 521.1 931.94 982.63 811.25 779.33 877.82 938.71 801.9 679.39 670.47 True False 760.0813376267622 565.0149258006089 995.1870526104765 1043.3248233853526 754.2705986605666 772.9833948660379 911.2259204615353 919.9866926462507 768.1989316823668 636.4931994545773 588.0064404595095 1.2926411775911526 0.9608992128709791 1.6924764494633213 1.7743425098711936 1.2827590767052257 1.3145832114729465 1.5496869723900295 1.5645860816206514 1.3064464584470237 1.0824595712883296 1.0 9.199688146822945 -9.907128225377422 0.8093284118696349 1.0280519382239541 1.4258420749268639 0.30897530473595614 0.21555649329221502 0.48789958336491573 0.6561209716928896 0.09405416337888399 0.04652768875858362 1.2384308860223542e-10 9.907128225377422 0.39779013670290975 GQVSESEDSIT(ph)KQIESLETEMEFR ddPTM_A549_PD325901_60min_R1 1 GQVSESEDSITKQIESLETEMEFR 24 1 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 GQVSES(0.009)EDS(0.42)IT(0.571)KQIESLETEMEFR 69.766 4.3155e-05 9687500.0 919.88 691.54 924.45 839.54 1038.5 937.06 1069.6 988.15 954.58 850.07 936.43 True False 1013.2655404201348 749.8185027598411 987.1887361694469 891.3964790663205 965.5593426305062 929.4288940412526 1110.3042133075776 968.4405730613217 914.4623222413697 796.3964351261461 821.2550465188574 1.2338012956086821 0.9130153975164936 1.202048913250458 1.0854076122208065 1.1757119140068935 1.1317177264004934 1.3519602929856493 1.1792202400050453 1.1134937022519376 0.9697309483843269 1.0 9.681686520433875 -9.901086278546648 0.9769894940576722 1.015443059425434 1.1523610816846408 0.2773022476859409 0.10290537370877686 0.5152817920123813 1.003900420213633 0.035132067651221933 0.019638562709098407 1.2557804609251994e-10 9.901086278546648 0.1369180222592068 GRAEGEWEDQEALDYFS(ph)DKESGK ddPTM_A549_MK2206_60min_R1 5 GRAEGEWEDQEALDYFSDKESGK 23 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDY(0.002)FS(0.981)DKES(0.017)GK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(1)DKESGK 235.63 1.0699999999999997e-98 903718200.0 25893.3 25432.2 19877.8 19473.899999999998 40404.4 31170.899999999998 26787.0 26245.399999999998 42779.8 39917.899999999994 42639.6 True False 30263.456009594745 26726.590350290953 22696.770940238493 24245.006374216577 34460.96628338504 34469.38394843118 31653.85116345577 29965.765823166555 33090.24360530281 30900.418665814406 32051.01052690753 0.9442278265825007 0.8338766831658363 0.7081452524307792 0.75645060719263 1.0751912565893764 1.0754538899637307 0.9876085228851572 0.9349398140819815 1.0324243467307472 0.9641012298152917 1.0 14.968082223419218 -6.7595840107533185 24.999999118302195 1.0154080979948863 0.8050087692364966 0.6703698402677405 0.06711091825415276 20.994922414428707 282886.2956430143 0.009525832580202714 0.019060080431588907 1.7394661798338252e-07 6.7595840107533185 -0.21039932875838974 GRAEGEWEDQEALDYFS(ph)DKESGK ddPTM_A549_PD325901_60min_R1 6 GRAEGEWEDQEALDYFSDKESGK 23 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 GRAEGEWEDQEALDYFS(0.999)DKES(0.001)GK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDY(0.008)FS(0.982)DKES(0.01)GK;GRAEGEWEDQEALDY(0.003)FS(0.957)DKES(0.04)GK 215.71 2.7887e-74 1804405700.0 38213.45 36675.15 33771.159999999996 35868.509999999995 33549.39 38660.299999999996 32200.140000000003 31367.25 41746.48 42491.68 46537.49 True False 42092.85131274493 39765.893601950105 36063.07400008241 38084.026399403374 31192.996585512275 38345.463334581604 33425.53394829271 30741.605591618405 39992.02062289477 39808.74807312453 40813.67375545516 1.0313418871566002 0.9743277177207061 0.8836027409873196 0.9331192929995198 0.7642780890642813 0.9395249142318718 0.8189788096158594 0.7532182909045153 0.979868189825706 0.9753777205073015 1.0 15.316764957095486 -8.963087164540047 24.996464983966888 0.9911184377928041 0.8856903787116498 0.22635397724648387 0.08050400387847091 163.70766736165274 110859.43231458397 0.014058915005563732 0.014926513879119918 1.0887115628885114e-09 8.963087164540047 -0.10542805908115427 GRAEGEWEDQEALDYFS(ph)DKESGKQK ddPTM_A549_PD325901_60min_R1 2 GRAEGEWEDQEALDYFSDKESGKQK 25 3 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 GRAEGEWEDQEALDYFS(0.997)DKES(0.003)GKQK;GRAEGEWEDQEALDYFS(1)DKESGKQK 166.19 5.471599999999999e-42 42857000.0 5049.6 4420.2 6347.200000000001 7880.7 4397.6 11705.7 5598.6 7961.1 10301.6 9332.8 9553.099999999999 True False 5562.231674680955 4792.705766693247 6777.959160814236 8367.472940631724 4088.727746896407 11610.372660212468 5811.6577866714715 7802.309615137868 9868.659576778991 8743.525415254386 8378.129262090386 0.6638990042620981 0.5720496326524142 0.8090062767930011 0.9987280786527274 0.4880239512891269 1.3857953603971516 0.6936701028197593 0.9312710953794895 1.177907295060844 1.0436130956844214 1.0 13.032412427679864 -6.4777412651743465 0.4847081381043958 1.0765001651484376 0.5404489921098196 0.29136246731184434 0.21786186435424199 1.4384114512798085 0.4437385502396021 0.04712056185610331 0.3589549667737063 3.328577972479851e-07 6.4777412651743465 -0.536051173038618 GRAPS(ph)RDEGSLLLGSR ddPTM_A549_MK2206_60min_R1 4 GRAPSRDEGSLLLGSR 16 2 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 GRAPS(1)RDEGSLLLGSR;GRAPS(0.977)RDEGS(0.023)LLLGSR;GRAPS(1)RDEGSLLLGSR;GRAPS(1)RDEGSLLLGSR 180.04 9.6973e-30 55765000.0 5257.45 5126.01 4684.9800000000005 4957.72 6512.9 4692.75 3661.92 4677.08 6283.849999999999 6473.410000000001 5997.79 True False 6144.779027688392 5386.902014041057 5349.38061151629 6172.361622560507 5554.861037586458 5189.333690204662 4327.243463339752 5340.070412956775 4860.568008246466 5011.062185021503 4508.373212417112 1.362970352757007 1.1948660326532576 1.1865434291870174 1.369088434284984 1.2321209393860904 1.1510435018804623 0.9598237012458317 1.1844783387162745 1.0781201509358913 1.1115011887702348 1.0 12.13839123438174 -7.4216705503845715 2.8735363762566095 1.0459905603794954 1.2671102367105616 0.5948707844247558 0.07842349566614312 0.1278688177638633 2.0457333457229545 0.01169433343180972 0.019302458561807616 3.7872977479328123e-08 7.4216705503845715 0.2211196763310661 GRAPS(ph)RDEGSLLLGSR ddPTM_A549_PD325901_60min_R1 2 GRAPSRDEGSLLLGSR 16 2 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 GRAPS(0.999)RDEGS(0.001)LLLGSR;GRAPS(0.999)RDEGS(0.001)LLLGSR 99.09200000000001 4.905699999999999e-07 16855800.0 640.49 580.14 756.33 719.46 612.59 882.7 635.5699999999999 801.89 1115.65 1605.3899999999999 1774.67 True False 705.512073296183 629.0304338015073 807.6591019817606 763.8994101877875 569.5637917207724 875.5115838582523 659.7569641472486 785.8956748794643 1068.763110277382 1504.0254014224292 1556.3968405600215 0.4532983201394358 0.40415812818996094 0.5189287724916927 0.4908127479318975 0.36595023639076035 0.5625246473407298 0.42390022065956867 0.5049455604116261 0.6866906192721521 0.9663508446093042 1.0 10.603994241459809 -9.534004960028374 0.5516508253552002 0.9928887788398405 0.44053082713913033 0.9167879518792701 0.05974334935417382 0.1435852253532781 0.09705606012123168 0.032540354388559685 0.017180579431615925 2.924118981619007e-10 9.534004960028374 -0.5523579517007102 down GRAS(ph)PGGVSTSSSDGK ddPTM_A549_MK2206_60min_R1 4 GRASPGGVSTSSSDGK 16 1 P54259 P54259 ATN1 Atrophin-1 1 GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK 140.51 5.703300000000001e-13 114862200.0 9250.83 10281.9 8416.300000000001 7871.389999999999 11274.499999999998 8645.1 8210.210000000001 8590.1 12613.699999999999 11553.0 12818.399999999998 True False 10812.143942921113 10805.204792454302 9609.857894954639 9799.880903360121 9616.035985239841 9559.918743847067 9701.898882320382 9807.772981077936 9756.717089939839 8943.169276093025 9635.237510157494 1.1221460738796445 1.121425889197171 0.9973659585271146 1.0170876320411468 0.9980071560356026 0.9921829880964506 1.006918498074657 1.0179067169583058 1.0126078448667488 0.9281732045178037 1.0 13.234104514286674 -5.758802959192504 24.999999829818517 1.0057908480380575 1.1217860331241418 0.7877824982565294 0.024674585165331574 7.488233550041927 71003.04051526455 0.0011517387009120645 0.004089004536945078 1.7425973160888716e-06 5.758802959192504 0.11599518508608431 GRAS(ph)PGGVSTSSSDGK ddPTM_A549_PD325901_60min_R1 4 GRASPGGVSTSSSDGK 16 1 P54259 P54259 ATN1 Atrophin-1 1 GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK 196.62 9.477000000000001e-40 326545000.0 23472.6 21152.5 21327.7 22260.3 26617.0 22075.9 22932.0 22802.899999999998 24220.6 23960.199999999997 25028.3 True False 25855.52107238517 22935.09540970522 22775.12597587877 23635.26817419067 24747.513743665106 21896.12118964132 23804.689808871888 22348.07827097101 23202.692411405333 22447.348882926683 21949.977767465713 1.1779292601702887 1.0448801202750944 1.0375922115800997 1.0767786839958853 1.1274505152504484 0.997546394880444 1.0844972173117748 1.0181367155685854 1.0570713399899838 1.0226592992817594 1.0 14.421931858044333 GRAS(ph)PGGVSTSSSDGKAEK ddPTM_A549_MK2206_60min_R1 3 GRASPGGVSTSSSDGKAEK 19 2 P54259 P54259 ATN1 Atrophin-1 1 GRAS(0.999)PGGVS(0.001)T(0.001)SSSDGKAEK;GRAS(1)PGGVSTSSSDGKAEK;GRAS(1)PGGVSTSSSDGKAEK 145.14 2.2771e-21 51335600.0 5844.299999999999 8176.0 7236.5 5659.8 9818.0 5634.700000000001 6525.6 4968.3 10695.7 10333.7 11898.599999999999 True False 6830.674960583416 8592.123477480467 8262.744514434993 7046.451254078074 8373.785205825956 6230.960213988852 7711.217051265428 5672.571739780623 8273.141027523205 7999.3099929336595 8943.849235346057 0.7637287683236671 0.9606740063913901 0.9238465784710077 0.787854431426519 0.936261891885743 0.6966754525964192 0.8621810194195503 0.6342427729397139 0.925008998902596 0.8943923116816882 1.0 13.126680153830241 -8.979833411088569 18.537033956322084 0.966918978938202 0.8257231662569238 0.22178070976792663 0.09832126941287432 6.83210431665031 6280.877203522037 0.01664502528524357 0.017058693338549005 1.0475302880517378e-09 8.979833411088569 -0.14119581268127823 GRAS(ph)PGGVSTSSSDGKAEK ddPTM_A549_PD325901_60min_R1 4 GRASPGGVSTSSSDGKAEK 19 2 P54259 P54259 ATN1 Atrophin-1 1 GRAS(0.999)PGGVSTSSSDGKAEK;GRAS(1)PGGVSTSSSDGKAEK;GRAS(1)PGGVSTSSSDGKAEK;GRAS(1)PGGVSTSSSDGKAEK 159.1 2.8964000000000003e-27 138598000.0 9850.8 9718.7 9700.3 10215.9 12080.3 13280.900000000001 11351.8 12709.7 11974.5 12411.0 13493.8 True False 10850.845964224327 10537.72895678062 10358.620690642538 10846.912941007722 11231.82140277257 13172.744753668363 11783.798960943313 12456.195062933233 11471.253407445447 11627.367341925494 11834.148144245868 0.9169097624910456 0.8904509921911357 0.8753161245221712 0.9165774172162809 0.949102653259739 1.1131130515780607 0.9957454323970892 1.0525637258470373 0.9693349506549086 0.9825267691598979 1.0 13.530668240053469 -6.8889506740056206 3.6102742268841777 1.000468500003958 0.8969350759910735 0.6340119274974616 0.040955656858355505 0.13328641171561018 3.3618519584524598 0.006208905447411797 0.012263361322330645 1.291365935140059e-07 6.8889506740056206 -0.10353342401288446 GRAS(ph)S(ph)HS(ph)SQTQGGGSVTK ddPTM_A549_PD325901_60min_R1 1 GRASSHSSQTQGGGSVTK 18 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 3 GRAS(0.964)S(0.907)HS(0.589)S(0.488)QT(0.051)QGGGSVTK 59.324 0.0010149 6712500.0 1346.7 1236.8 1149.5 1171.7 1435.2 1574.8 1299.1 1764.2 1641.4 1416.5 1716.0 True False 1483.4159926118582 1341.029476549977 1227.5119825050351 1244.0732478762272 1334.3965031712119 1561.9753509232758 1348.5379613947964 1729.0116470118746 1572.4176661222562 1327.061948258597 1504.9428786202484 0.9856958783524553 0.8910833066165612 0.8156535373823852 0.8266581180920369 0.8866758480525216 1.0378967687832215 0.8960725224542435 1.1488885535622824 1.0448354475512516 0.8818022046625883 1.0 10.55549301397582 -7.232157066026716 6.257849739651604 1.022977848998459 0.8743764470123918 0.3381812676470225 0.0806999869493063 0.11803934919468065 15.908447461525762 0.009981050793041336 0.017151007964993747 5.859262213489567e-08 7.232157066026716 -0.14860140198606708 GRAS(ph)SESQGLGAGVR ddPTM_A549_MK2206_60min_R1 2 GRASSESQGLGAGVR 15 1 Q9BV36-2;H7C2D8;Q9BV36-3 Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 GRAS(0.844)S(0.142)ES(0.013)QGLGAGVR;GRAS(0.908)S(0.092)ESQGLGAGVR 86.016 2.3416e-05 13402200.0 1729.19 1951.61 1711.65 1629.81 1704.63 1424.81 1632.3200000000002 1905.42 2491.1000000000004 2589.0 2692.2 True False 2021.0349973634554 2050.938612999712 1954.3877078881571 2029.1135231649514 1453.881185109706 1575.5824484876664 1928.8914149076847 2175.5191201040193 1926.86982746927 2004.1431018614094 2023.652439059946 0.998706575474143 1.0134836266411644 0.9657724173208495 1.0026986274913603 0.7184441147339917 0.7785835245599669 0.9531732710997147 1.075045832037551 0.9521742915321789 0.9903593439159941 1.0 10.982745814070885 -7.995421126201048 24.99900671606224 0.98553557158312 0.9110509324826059 0.16609744356274936 0.09223106363488574 231.3501776735181 1263077.718386258 0.015481708358902502 0.02134832852979923 1.01059902242334e-08 7.995421126201048 -0.07448463910051406 GRAS(ph)SHSS(ph)QTQGGGSVTK ddPTM_A549_PD325901_60min_R1 1 GRASSHSSQTQGGGSVTK 18 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 GRAS(0.372)S(0.345)HS(0.357)S(0.726)QT(0.197)QGGGS(0.002)VTK 43.888000000000005 0.01649 9161200.0 580.84 414.42 611.7 799.53 877.37 764.84 764.42 791.38 679.83 856.22 813.26 True False 639.8064492081916 449.3446278071164 653.2136404509179 848.9151522356242 815.746557962184 758.6113966218943 793.5104214066739 775.5953050744005 651.2591092725078 802.1581230765808 713.2341756798969 0.8970496241270132 0.6300099506291529 0.9158473650372069 1.1902334200774776 1.1437289263159134 1.0636217703655901 1.1125524385455212 1.0874342979079168 0.9131069871290017 1.1246770702089763 1.0 9.47823202327973 -5.989511304632684 18.066454475327397 1.0127940823439063 0.7658743741712766 0.5160231515569431 0.10660892583709775 5.424577687692766 9337.11453641142 0.015749676571627257 0.04869873965812051 1.0244451137812737e-06 5.989511304632684 -0.24691970817262976 GRAS(ph)SHSSQTQGGGS(ph)VTK ddPTM_A549_MK2206_60min_R1 1 GRASSHSSQTQGGGSVTK 18 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 GRAS(0.514)S(0.108)HS(0.159)S(0.217)QT(0.005)QGGGS(0.966)VT(0.031)K 68.23100000000001 0.00048119 5202100.0 447.48 492.35 560.33 392.83 643.18 326.5 466.36 381.63 634.03 882.96 556.14 True False 523.003684164377 517.40851200312 639.7932196190644 489.0733676348089 548.5690740153941 361.0500132868408 551.0915753383817 435.72722119285845 490.4232173378592 683.4987227576474 418.03508931684064 1.2510999615345153 1.237715505769329 1.5304773115209642 1.1699337690385276 1.3122560474812632 0.8636835101016861 1.3182902330973796 1.0423221215829765 1.1731628034845505 1.6350271549563735 1.0 8.707480235092158 -2.000000000000132 0.0733643736961135 0.8086384715942075 2.1742521788259945 0.0 0.23573114069435627 164.43078826030603 0.8620558182517231 2.6243344474064947 23.001341158642262 0.009999999999996963 2.000000000000132 1.365613707231787 GRAS(ph)SHSSQTQGGGSVTK ddPTM_A549_PD325901_60min_R1 2 GRASSHSSQTQGGGSVTK 18 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 GRAS(0.754)S(0.19)HS(0.024)S(0.032)QTQGGGSVTK;GRAS(0.515)S(0.119)HS(0.193)S(0.169)QT(0.003)QGGGSVTK 82.885 4.8348e-05 14444100.0 1530.7800000000002 1621.9299999999998 1645.71 1434.47 2174.29 2042.7199999999998 1835.87 2024.99 2072.31 1904.54 1978.5700000000002 True False 1686.183658699324 1758.6157332638304 1757.397777058165 1523.073953982258 2021.5753712932938 2026.0847655816567 1905.7350374766113 1984.5999858760763 1985.2180173521467 1784.2870193691704 1735.2184331886167 0.971741439837527 1.0134837779657626 1.0127818742847214 0.8777419170124164 1.1650264500582044 1.1676251973986627 1.098268091801362 1.1437176714571888 1.1440738407234032 1.0282780457157694 1.0 10.760901568585139 -6.768562263263113 24.99999241501533 1.0909010028874757 0.9752509028838661 0.5271521636368718 0.06151697897895708 139.66042307764576 490184.316291685 0.0107897131465324 0.020701673872363296 1.7038750232711274e-07 6.768562263263113 -0.11565010000360965 GRASS(ph)HS(ph)S(ph)QTQGGGSVTK ddPTM_A549_PD325901_60min_R1 1 GRASSHSSQTQGGGSVTK 18 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 3 GRAS(0.572)S(0.66)HS(0.815)S(0.776)QT(0.176)QGGGS(0.001)VTK 44.632 0.011186 7107100.0 1083.9 1135.3 1451.1 1742.4 1507.5 1726.9 1701.0 1773.6 1561.1 1740.4 2125.7 True False 1193.936730074993 1230.9757153356966 1549.5803721731681 1850.0240907224886 1401.6184005926716 1712.83669895187 1765.7324858229144 1738.2241566377168 1495.4923958714846 1630.510846981478 1864.2523759225314 0.6404372849379738 0.6603052951596986 0.8312074009863355 0.992367833141153 0.7518394068823843 0.9187794104884899 0.9471531368971092 0.932397447409743 0.8021941745582785 0.8746191599592916 1.0 10.864381464850297 -5.835845102954706 3.3517278073677024 0.9041712007785795 0.6431976477330085 0.6499292728903776 0.07057480538353023 0.12263080449786827 2.704298497773652 0.011680057678966703 0.04482849144925843 1.4593346590593258e-06 5.835845102954706 -0.260973553045571 GRASS(ph)HSS(ph)QTQGGGSVTK ddPTM_A549_PD325901_60min_R1 1 GRASSHSSQTQGGGSVTK 18 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 GRAS(0.462)S(0.496)HS(0.186)S(0.756)QT(0.099)QGGGS(0.001)VTK 49.593 0.0054942 10713000.0 661.22 688.18 591.07 856.92 570.41 824.26 765.6 907.82 909.59 772.03 838.92 True False 728.3465676355631 746.1753437679197 631.1835645926498 909.850002193477 530.346369407672 817.5474998425324 794.7353269523953 889.7128179289872 871.3630954844299 723.2838940445359 735.738158352039 0.9899535036581056 1.0141860053028358 0.8578915711078811 1.236649196273069 0.7208357530287421 1.1111935551551873 1.080187724301948 1.209279154314671 1.1843385932791275 0.9830724230269651 1.0 9.52304860706371 GRCETS(ph)ASELER ddPTM_A549_PD325901_60min_R1 1 GRCETSASELER 12 1 H3BTQ3;P41440-3;P41440;P41440-2 H3BTQ3 SLC19A1 Folate transporter 1 1 GRCET(0.169)S(0.767)AS(0.063)ELER 41.378 0.026576 2600500.0 420.48 495.85 472.7 473.58 364.11 492.99 399.57 436.44 325.31 481.66 496.63 True False 463.16682005898423 537.6370196857262 504.78026457601544 502.8319610217837 338.5361697113085 488.97525289031336 414.77585500309345 427.7348618194435 311.63835199599816 451.2479053993902 435.5476583969545 1.063412490297119 1.2343930895289725 1.1589552942010377 1.154482067180595 0.7772655028322285 1.1226676196354737 0.9523087703643908 0.982062131601703 0.7155091893800829 1.0360471390437982 1.0 8.766686779485374 -6.884209877649871 0.7797986008172476 0.8773403916343869 1.1833891938297938 0.25941364763890307 0.13078284269213375 0.5473819974435298 0.6098681424274462 0.024959086179248868 0.0899421812977694 1.3055398189869105e-07 6.884209877649871 0.30604880219540687 GRDIVVLGVEK ddPTM_A549_PD325901_60min_R1 2 GRDIVVLGVEK 11 1 O14818;O14818-4 O14818 PSMA7 Proteasome subunit alpha type-7 0 ; 84.169 0.00054827 4008400.0 1932.19 1846.6399999999999 1657.92 1576.38 2110.01 2249.7 2184.6 2138.17 2539.7 2073.3 2286.9 False True 2128.3445063969016 2002.262833583643 1770.4364210828596 1673.7494123812648 1961.8101767393325 2231.3791890856587 2267.7361484589887 2095.5225219880836 2432.9652410446556 1942.3914841684095 2005.625797853524 1.0611872407478575 0.9983232344371117 0.8827351657411016 0.8345272653415994 0.9781536410425692 1.1125600755004956 1.1306875643931098 1.044822281519698 1.2130703761631316 0.9684715295581111 1.0 10.96983674308458 -7.17775555254653 4.459736312190697 1.101572070151975 0.9402095232249507 0.3479588038515733 0.08396063762255061 0.18110839933888384 6.539495097585264 0.013962736405731594 0.02454377972493463 6.641167706924684e-08 7.17775555254653 -0.16136254692702423 GRDS(ph)PYQSR ddPTM_A549_MK2206_60min_R1 9 GRDSPYQSR 9 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GRDS(0.994)PY(0.001)QS(0.005)R;GRDS(1)PYQSR;GRDS(0.836)PY(0.145)QS(0.019)R;GRDS(0.999)PYQS(0.001)R;GRDS(0.983)PYQS(0.017)R;GRDS(1)PYQSR;GRDS(0.967)PY(0.002)QS(0.031)R;GRDS(0.98)PY(0.017)QS(0.002)R;GRDS(0.998)PY(0.001)QS(0.002)R 118.31 4.6651000000000004e-05 3326892200.0 10210.179999999998 10545.359999999999 9883.59 9091.969999999998 17296.289999999997 12293.079999999998 11077.98 11473.73 18136.989999999998 14586.800000000001 14881.37 True False 11933.40876906552 11082.073781125655 11285.231680429002 11319.503058154041 14752.028653256808 13593.925566113918 13090.705570304242 13100.166364324437 14028.990723821547 11291.631749027421 11185.915124081976 1.0668245411029695 0.9907167771430017 1.0088787153527752 1.0119425127573574 1.3188039145315347 1.215271653264003 1.170284721910814 1.1711304992938218 1.2541656688971974 1.0094508695777469 1.0 13.449395668219035 GRDS(ph)PYQSR ddPTM_A549_PD325901_60min_R1 15 GRDSPYQSR 9 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GRDS(0.98)PYQS(0.02)R;GRDS(0.998)PY(0.001)QS(0.001)R;GRDS(0.945)PY(0.04)QS(0.015)R;GRDS(0.998)PYQS(0.002)R;GRDS(1)PYQSR;GRDS(1)PYQSR;GRDS(1)PYQSR;GRDS(0.981)PY(0.005)QS(0.014)R;GRDS(1)PYQSR;GRDS(1)PYQSR;GRDS(1)PYQSR;GRDS(0.985)PY(0.014)QS(0.001)R;GRDS(0.997)PY(0.002)QSR;GRDS(1)PYQSR;GRDS(0.999)PYQSR 129.69 4.1648000000000005e-05 3817924800.0 16910.629999999997 17666.47 15913.81 15583.039999999999 19423.770000000004 17453.890000000003 16324.570000000003 17480.02 17799.39 19672.09 18681.219999999998 True False 18627.384708652156 19155.285427381867 16993.816844113495 16545.56898914839 18059.511403568755 17311.751306658793 16945.810444497474 17131.367288289595 17051.343537346078 18429.990880140114 16383.548370010585 1.1369566767812533 1.1691780678259438 1.0372488584475377 1.009889226404359 1.1022954854289044 1.0566545729707275 1.0343186995752451 1.0456445027285945 1.0407601059461493 1.1249083815002774 1.0 13.999960231120209 -2.0000000000000004 0.27120051915482224 1.0145868662041861 2.0103376847024106 0.21317893755437467 0.046974779806411675 23.363775129211607 0.2890833015371163 0.013785620033133847 11.089805521996118 0.00999999999999999 2.0000000000000004 0.9957508184982244 GRDS(ph)YGGPPR ddPTM_A549_MK2206_60min_R1 2 GRDSYGGPPR 10 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 GRDS(1)YGGPPR;GRDS(1)YGGPPR 102.62 0.00010979 13697200.0 1165.3000000000002 1184.85 1040.13 1124.04 1491.24 1125.0900000000001 758.45 1299.47 1646.75 1765.61 1493.07 True False 1361.9741511503269 1245.153804096469 1187.6360743175944 1399.4298504600724 1271.8805714336831 1244.1462770257012 896.2505474641816 1483.6738519599705 1273.763754319384 1366.7574747305991 1122.299512364324 1.2135567521374802 1.1094665821188237 1.058216689246908 1.2469308193068034 1.1332808732619333 1.1085688475482673 0.7985841012940209 1.3219945617140534 1.1349588414557656 1.2178188261449752 1.0 10.132242029538212 -7.378151294890176 4.746840035299116 1.0665812153625944 1.1495138997394816 0.018914442894311323 0.13267159389626568 0.46489660272818917 16.29068445720607 0.01882647322826161 0.030413385145790596 4.1864769568187915e-08 7.378151294890176 0.08293268437688717 GRDS(ph)YGGPPR ddPTM_A549_PD325901_60min_R1 2 GRDSYGGPPR 10 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 GRDS(1)YGGPPR;GRDS(1)YGGPPR 113.24 3.1469e-05 23782000.0 2159.1 2145.8 2523.7 2251.8 2149.3999999999996 2118.0 2225.51 2596.0 2358.0 2950.9 2736.7 True False 2378.2902425545885 2326.6340966857556 2694.9734582409387 2390.8885717911485 1998.433559027453 2100.7517102206625 2310.2030008957995 2544.2207434773977 2258.9014601658832 2764.579670396257 2400.10324937065 0.9909116381464919 0.9693891699433518 1.1228573016380063 0.9961607161767239 0.8326448287387128 0.8752755577375754 0.9625431745495017 1.0600463726485676 0.9411684521314688 1.151858642381814 1.0 11.22888075472546 -6.5248322063512925 24.999976245539397 0.9603561617544563 1.028156802230523 0.04925851810145998 0.08837617869695327 88.06391016144383 1127026.627085089 0.01006444968726911 0.021063707245725427 2.986536271669407e-07 6.5248322063512925 0.06780064047606671 GRDVESVQT(ph)PSK ddPTM_A549_MK2206_60min_R1 3 GRDVESVQTPSK 12 1 P46013 P46013 MKI67 Antigen KI-67 1 GRDVES(0.003)VQT(0.952)PS(0.045)K;GRDVES(0.003)VQT(0.948)PS(0.05)K;GRDVES(0.014)VQT(0.976)PS(0.009)K 78.505 0.00048699 94158700.0 5666.900000000001 7245.700000000001 6567.4 6007.6 8770.6 7135.299999999999 6242.7 6765.5 10900.100000000002 10861.9 10457.6 True False 6623.334177597002 7614.475181113045 7498.756073253696 7479.462269691416 7480.456358343568 7890.352709971189 7376.917783182342 7724.530343474795 8431.244753882942 8408.189246082822 7860.689304922846 0.8425894881062229 0.9686777947506963 0.9539565529650835 0.95150208582946 0.9516285491221296 1.0037736391679755 0.9384568575382395 0.9826784959732756 1.0725833863708085 1.069650372877236 1.0 12.940440112819067 -2.0000501348476747 0.24969633548917533 1.033851190633033 0.030452383725226597 0.6029361647664307 0.038203000364710485 25.825794523000575 0.31350331862906466 0.02072892543487845 11.055068663097297 0.009998845669100167 2.0000501348476747 -1.0033988069078064 GRDVESVQT(ph)PSK ddPTM_A549_PD325901_60min_R1 1 GRDVESVQTPSK 12 1 P46013 P46013 MKI67 Antigen KI-67 1 GRDVES(0.001)VQT(0.979)PS(0.02)K 96.24700000000001 0.00010175 60083000.0 8057.3 8383.9 9122.1 7966.4 9757.5 8750.9 8244.2 8945.7 9348.9 9425.4 10547.0 True False 8875.271164529242 9090.440676299608 9741.18056164348 8458.466434992895 9072.166861547586 8679.635571751647 8557.93754239934 8767.270995734116 8955.998244675495 8830.278635451168 9249.785862941591 0.9595109871772484 0.9827730945339627 1.0531249810517902 0.9144499732562411 0.9807975012583136 0.9383607037354023 0.9252038554412295 0.9478350229554365 0.9682384411250936 0.95464681737432 1.0 13.175204251583123 -10.218293170704179 0.9767078501847698 0.997266898280945 0.9638723821518348 0.0 0.037297130999161626 0.8051753665698954 1.5185148590776731 0.015077024218403477 0.006630724374304242 6.049323769917106e-11 10.218293170704179 -0.03339451612911015 GRECS(ph)PTSSLER ddPTM_A549_MK2206_60min_R1 2 GRECSPTSSLER 12 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GRECS(0.989)PT(0.008)S(0.002)SLER;GRECS(0.946)PT(0.046)S(0.008)S(0.001)LER 102.39 5.9012e-05 36627000.0 2198.32 2254.44 2087.73 1810.08 2724.02 2836.1000000000004 2232.51 2376.08 2961.6 3445.1 3615.2 True False 2569.342672236151 2369.181366508204 2383.8015069607354 2253.549681257578 2323.3202664874734 3136.214219549184 2638.1281689224857 2712.896616439817 2290.8023287033793 2666.8495172741364 2717.4460655558687 0.9454990495682856 0.871841173423096 0.8772212766891164 0.8292895707560628 0.8549646287136983 1.1541035751550983 0.9708116022471422 0.9983258364632451 0.842998268756728 0.9813808454478442 1.0 11.408035686344386 GRECS(ph)PTSSLER ddPTM_A549_PD325901_60min_R1 1 GRECSPTSSLER 12 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GRECS(0.959)PT(0.023)S(0.015)S(0.002)LER 50.608000000000004 0.008006300000000001 24323000.0 1003.1 937.63 853.22 961.7 955.19 836.14 794.33 970.79 888.39 1039.7 1003.4 True False 1104.9339735568087 1016.6473707127711 911.1246400286614 1021.1020248208313 888.1007496266093 829.3307530613332 824.558662824054 951.4268318799778 851.0540577594438 974.0531645636884 879.9881610766656 1.2556236804423844 1.1552966456604403 1.0353828384621677 1.1603588207044886 1.0092189746507703 0.9424339891648621 0.937011086393715 1.0811813998905473 0.9671198947928789 1.106893487489575 1.0 9.78134030435321 -4.636263847690606 0.5195230719285038 0.9846206300304055 1.6581314750111908 0.5451332563728211 0.06571121688691174 2.745791107959962 0.31147583241473736 0.009919500814435808 1.3000198003128756 2.3106605639854052e-05 4.636263847690606 0.6735108449807854 GREDVSNFDDEFTSEAPILT(ph)PPR ddPTM_A549_MK2206_60min_R1 1 GREDVSNFDDEFTSEAPILTPPR 23 1 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 GREDVSNFDDEFT(0.007)S(0.013)EAPILT(0.98)PPR 49.968 0.0039854 1518500.0 1077.9 1000.6 723.94 793.52 1432.6 1171.5 1128.5 1071.8 1432.5 1201.9 1395.2 True False 1259.8231678751724 1051.5262660918484 826.6055778041961 987.9324356224665 1221.8664377537443 1295.4673524212367 1333.5338424593956 1223.7309322498377 1108.0410372324388 930.389955244198 1048.7333344389103 1.2012807512685755 1.0026631475907384 0.7881942441034772 0.942024443373898 1.165087823214338 1.2352685948657607 1.271566182429834 1.1668656769688301 1.0565517475662762 0.8871558905314781 1.0 10.034432169450309 -5.248532032410251 22.824373077594213 1.0515929514357754 1.2012810715356916 0.08416984915728476 0.14199810866708076 1285.7508845645714 2273483.2346339896 0.019750130196180497 0.44783233143630025 5.642453225703442e-06 5.248532032410251 0.14968812009991628 GREDVSNFDDEFTSEAPILT(ph)PPREPR ddPTM_A549_MK2206_60min_R1 4 GREDVSNFDDEFTSEAPILTPPREPR 26 2 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR 364.19 1.821799999999999e-282 883838000.0 18451.9 19404.5 19301.1 15650.0 25219.1 19906.8 19617.8 17370.4 28290.3 29469.899999999998 27665.9 True False 21566.129614357425 20392.106166679278 22038.28620846557 19484.2507025552 21509.403797539766 22013.324362935615 23182.10032308368 19832.707394618938 21882.592220325907 22812.629122265564 20795.693490003912 1.0370478688159088 0.9805927451508827 1.0597524059036045 0.9369368091485337 1.0343201013170789 1.0585520686538774 1.1147548570201262 0.9536930039939344 1.0522655679092618 1.096988140031548 1.0 14.34399717599836 GREDVSNFDDEFTSEAPILT(ph)PPREPR ddPTM_A549_PD325901_60min_R1 4 GREDVSNFDDEFTSEAPILTPPREPR 26 2 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR 364.19 1.821799999999999e-282 1382598000.0 16552.99 17469.039999999997 17214.72 17398.1 19457.9 19456.809999999998 18817.399999999998 19100.800000000003 17163.2 19505.3 20821.600000000002 True False 18233.43735913283 18941.217308401217 18383.01441972082 18472.741123048047 18091.24423011087 19298.3601902448 19533.506454276372 18719.819559712283 16441.890390635755 18273.732029204682 18260.675198997313 0.9985083881309066 1.0372681788590858 1.0066996000635413 1.0116132575460506 0.9907215386594388 1.0568262115140443 1.0697034058931705 1.0251438873815675 0.9003988194006416 1.0007150245029321 1.0 14.15645249033904 -8.728344984635418 24.336033788460217 0.952966115297489 1.0254095686898141 0.3406501331515235 0.03412869689832024 105.1662863400471 77334.10307019962 0.007012071180690599 0.007950642100040211 1.8691967419338177e-09 8.728344984635418 0.07244345339232516 GREETVAEDVCIDLTCDSGSQAVPS(ph)PATR ddPTM_A549_MK2206_60min_R1 2 GREETVAEDVCIDLTCDSGSQAVPSPATR 29 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GREETVAEDVCIDLT(0.004)CDS(0.024)GS(0.024)QAVPS(0.815)PAT(0.133)R;GREETVAEDVCIDLT(0.006)CDS(0.007)GS(0.007)QAVPS(0.781)PAT(0.199)R 76.00399999999999 2.7846e-06 4742800.0 1165.62 1338.97 1231.0 1098.91 1794.51 1378.79 1331.9499999999998 1381.26 2019.71 1635.7199999999998 1475.29 True False 1362.3481593270787 1407.1178537967244 1405.574310408274 1368.1429993319446 1530.5399561730223 1524.6926426332711 1573.94807395994 1577.0578349313419 1562.2489098141216 1266.2097159431219 1108.9347770673603 1.2285196456097123 1.268891446905404 1.267499531510224 1.233745236983256 1.3801893382950983 1.3749164280566668 1.4193333156367711 1.4221375932513893 1.408783403786448 1.1418252381728742 1.0 10.114958799333388 -10.7785898481387 1.0163095570265184 0.9991474388211535 1.3377036459892615 0.5978967054620834 0.08053221232444616 0.23383715350618184 0.4271337220383183 0.05681383451222116 0.014198265346869578 1.664984335222502e-11 10.7785898481387 0.33855620716810797 GREETVAEDVCIDLTCDSGSQAVPS(ph)PATR ddPTM_A549_PD325901_60min_R1 2 GREETVAEDVCIDLTCDSGSQAVPSPATR 29 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GREETVAEDVCIDLTCDSGSQAVPS(0.994)PAT(0.006)R;GREETVAEDVCIDLTCDSGSQAVPS(0.996)PAT(0.004)R 185.97 5.362799999999999e-67 39616000.0 2561.3 3400.1000000000004 3373.8 2584.34 2895.1000000000004 3078.7 3062.2 3388.8 2980.3 3943.3 3429.5 True False 2821.321290470598 3686.6383596519863 3602.7663563075157 2743.968812338014 2691.7581635527986 3053.6280879397327 3178.7336967001347 3321.207725537831 2855.0483552724254 3694.319365032211 3007.69324139169 0.9380349204645431 1.2257361585007058 1.1978503348434826 0.9123167132125322 0.8949576793633698 1.0152724506328936 1.0568676529090788 1.1042375199144558 0.9492485190914501 1.2282899446629776 1.0 11.55444171680703 -6.260262148198531 24.999897436009935 0.9840850837415267 1.1310600404525653 0.0717464080415362 0.11504428389041622 87.46263616668129 1857345.1694958983 0.012079791101264961 0.030126484268339308 5.492092608948568e-07 6.260262148198531 0.14697495671103855 GREPAGERHPRPTETAS(ph)DSEGNFETPEAETPIR ddPTM_A549_MK2206_60min_R1 1 GREPAGERHPRPTETASDSEGNFETPEAETPIR 33 3 E5RFM9 E5RFM9 TACC1 1 GREPAGERHPRPT(0.096)ET(0.175)AS(0.528)DS(0.2)EGNFETPEAETPIR 46.975 0.001666 23543000.0 2668.8 3169.6 3108.0 2555.8 3600.5 3241.5 3101.4 3011.4 4320.3 4509.8 4523.4 True False 3119.2281941045158 3330.919101543798 3548.7611346457493 3181.9711147342205 3070.87121955351 3584.5133784664454 3664.8842348281532 3438.2751720257147 3341.7589481014356 3491.0330478078704 3400.1149405110154 0.9173890438055944 0.9796489706442637 1.043717990931328 0.9358422201621192 0.9031668850265332 1.054233001290161 1.0778706893589147 1.0112232180918461 0.9828370530318574 1.0267397158294862 1.0 11.73136780199635 -7.267939551007188 24.963756952378393 1.00437794823814 0.9610280287004661 0.32076446185489094 0.04470891959855879 750.3026110591188 2881519.43316891 0.007105789901388172 0.011523345893005956 5.395857216584113e-08 7.267939551007188 -0.043349919537673975 GREQSTLES(ph)EEWNPWEGDEKNEQQHR ddPTM_A549_PD325901_60min_R1 2 GREQSTLESEEWNPWEGDEKNEQQHR 26 2 F5GXF8;Q9Y2B1 F5GXF8 TMEM5 Transmembrane protein 5 1 GREQS(0.052)T(0.052)LES(0.897)EEWNPWEGDEKNEQQHR;GREQS(0.012)T(0.012)LES(0.976)EEWNPWEGDEKNEQQHR 98.94 5.4422e-10 22428500.0 2058.81 2259.0 2222.37 1935.7400000000002 2380.8999999999996 2059.51 1700.6100000000001 2108.71 3008.2 2422.8999999999996 2740.8 True False 2267.8188755841825 2449.373857961189 2373.1933923964466 2055.3062634154894 2213.673797659098 2042.7380333883648 1765.3276441594999 2066.6501247990072 2881.7758152972915 2269.917680505298 2403.6989753626904 0.9434704173978337 1.0190019145769311 0.9873089004576204 0.8550597576825807 0.9209446858149449 0.8498310538573738 0.7344212658297332 0.8597790929653217 1.1988921428326793 0.9443435737051032 1.0 11.231040517672911 -8.748829736992267 24.999999999989164 1.0939212922522934 0.8958672767572892 0.3045238934726431 0.09524324855703963 156.70626949031424 310687.2291666447 0.017774860763216938 0.020088408532744725 1.7830776772382594e-09 8.748829736992267 -0.19805401549500423 GRES(ph)PAAGPR ddPTM_A549_MK2206_60min_R1 4 GRESPAAGPR 10 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 GRES(1)PAAGPR;GRES(1)PAAGPR;GRES(1)PAAGPR;GRES(1)PAAGPR 124.48 5.8939e-06 362665000.0 4208.74 4553.320000000001 3861.1099999999997 4033.44 5329.1 4056.82 3429.38 4020.37 6433.200000000001 6446.199999999999 6392.1 True False 4919.07241818624 4785.06453919782 4408.6734570759445 5021.632981068003 4545.19644941608 4486.109999700828 4052.4539553862696 4590.269759366749 4976.090471709408 4989.998942919664 4804.765157014739 1.0237903950424334 0.9958997750830428 0.9175627347029607 1.0451359883295537 0.945976816948129 0.933679348126164 0.8434239391429715 0.9553577769904453 1.0356573753546605 1.0385520998116822 1.0 12.23025020263509 -8.750175386525038 24.272799736496523 1.016838203879729 0.9554719512866808 0.24256237349776255 0.05222990589017514 173.19324367301178 373213.543474254 0.009080624115259898 0.010247109091371314 1.7775614104066477e-09 8.750175386525038 -0.061366252593048176 GRES(ph)PAAGPR ddPTM_A549_PD325901_60min_R1 4 GRESPAAGPR 10 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 GRES(1)PAAGPR;GRES(1)PAAGPR;GRES(1)PAAGPR;GRES(1)PAAGPR 128.61 4.0078e-07 461113000.0 5666.4 5390.599999999999 5649.599999999999 6697.7 6745.8 6026.299999999999 6085.3 7010.5 6739.099999999999 6265.6 6852.4 True False 6241.648756616789 5844.884780312345 6033.015829804648 7111.4017174196515 6271.9982797466255 5977.223810813397 6316.879421503933 6870.670077869139 6455.879062851526 5869.988946706017 6009.598240942535 1.0386133159606787 0.9725916019630031 1.0038966979027937 1.1833406215028963 1.0436634910161542 0.9946128794586341 1.0511317343092814 1.1432827624083495 1.0742613406115145 0.9767689471676525 1.0 12.553052830478098 -6.0503558145799445 24.9998600246728 1.0518056276725318 1.0012618770666468 0.12704944319477318 0.06033465757876279 568.5590769088546 282268.3458392522 0.008402956095504503 0.022232400103823956 8.905210412097208e-07 6.0503558145799445 -0.05054375060588501 GRES(ph)PRPPEPATDSASKPAEPTDVPTVDFGGAEPQEK ddPTM_A549_PD325901_60min_R1 1 GRESPRPPEPATDSASKPAEPTDVPTVDFGGAEPQEK 37 3 A0A0G2JNU3;A0A0G2JN16 A0A0G2JNU3 1 GRES(0.995)PRPPEPAT(0.005)DSASKPAEPTDVPTVDFGGAEPQEK 216.25 5.0999999999999986e-114 25027000.0 2625.4 2960.8 2321.3 2825.1 3355.0 3102.3 3564.1 2800.6 3327.4 3694.2 3662.7 True False 2891.9286752826706 3210.3170069285043 2478.837377110863 2999.6000107323825 3119.3563741216676 3077.035897364287 3699.7337758503536 2744.7398359718004 3187.5609493451916 3460.9475815438855 3212.2111197682907 0.9002922184925618 0.9994103398658545 0.7716919233159467 0.9338116016947091 0.9710931996109518 0.9579183256131202 1.1517716731262764 0.8544705605059325 0.9923261051331902 1.077434655600575 1.0 11.649351000504037 -6.744817062303101 2.9571353565158343 0.9938415158760237 0.8957648923320288 0.2471114074675408 0.0849801383013527 0.2766768167655824 4.9667210182096815 0.010925070072806202 0.0234845040956339 1.799628812442882e-07 6.744817062303101 -0.09807662354399482 GREVS(ph)PSDVR ddPTM_A549_MK2206_60min_R1 2 GREVSPSDVR 10 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GREVS(0.974)PS(0.026)DVR;GREVS(0.954)PS(0.046)DVR 90.79299999999999 0.0001825 104471000.0 1919.76 1856.4099999999999 2041.7400000000002 1626.98 2660.25 2374.08 2081.43 1846.42 2906.7200000000003 3029.98 2897.26 True False 2243.7685543742828 1950.8933396317898 2331.289433414288 2025.5901730379064 2268.930749011865 2625.30356981324 2459.5988885336815 2108.1556894240953 2248.3525610780275 2345.5054135874984 2177.7903816918574 1.030295924363101 0.8958131857099129 1.070483850517873 0.9301125535618762 1.0418499264604169 1.205489560374366 1.1294011164760935 0.9680250712588485 1.032400813218466 1.077011558736589 1.0 11.088649382037696 -4.8862807611997185 20.070245882372088 1.0239123077097354 2.2536264722701462 0.0 0.084414238354864 23086.906351635815 2768346.2974384273 0.011052326580346999 418428.5236402252 1.299329320518611e-05 4.8862807611997185 1.2297141645604108 GREVS(ph)PSDVR ddPTM_A549_PD325901_60min_R1 2 GREVSPSDVR 10 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GREVS(0.948)PS(0.052)DVR;GREVS(0.999)PS(0.001)DVR 107.99 7.0158e-05 139062000.0 2921.5 2425.39 2542.02 3124.6 3499.8 2141.66 2836.4 2778.1000000000004 2808.6000000000004 3121.7 2913.7 True False 3218.088529305371 2629.7861272069454 2714.536763608047 3317.599445518528 3253.986121654546 2124.219031025109 2944.340754137634 2722.688616122713 2690.564309169593 2924.595329247344 2555.333371466095 1.2593615241126161 1.0291362201786354 1.062302396203831 1.2983039640010223 1.273409629440094 0.8312884161201876 1.1522335156012737 1.0654925288908976 1.0529210549251782 1.1445063731819027 1.0 11.31929580360843 -7.233686700347924 24.999671981725985 1.0274447324737424 1.1754046437138852 0.2855566146635675 0.1114154603677207 682.5661279108854 614857.556417559 0.015166324186635785 0.026264950285967335 5.8386615290562614e-08 7.233686700347924 0.14795991124014285 GREVS(ph)PSDVREDSNLESSQLTVQAEFDMSAIPR ddPTM_A549_PD325901_60min_R1 1 GREVSPSDVREDSNLESSQLTVQAEFDMSAIPR 33 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GREVS(0.34)PS(0.34)DVREDS(0.302)NLES(0.009)S(0.009)QLTVQAEFDMSAIPR 54.841 0.0017690999999999998 5334000.0 776.48 813.87 701.81 902.63 1177.4 939.76 1098.3 812.24 630.59 1282.9 1228.1 True False 855.3076779856353 882.4576811770136 749.4390469263668 958.383405078535 1094.7034858094928 932.1069061364345 1140.0964075128213 796.0392360100467 604.0884952357948 1201.8974750589166 1077.0514855673234 0.7941195842974142 0.8193272958647747 0.6958247186592098 0.8898213483023224 1.0163891888908834 0.8654246511209804 1.0585347337525743 0.7390911638645974 0.560872440482823 1.1159145975513252 1.0 10.07287150037271 -6.274277602855038 24.37836388846901 0.8300522633800049 0.7747141979261151 0.0 0.1628359183580768 2495.36911555053 4738429.618324153 0.02650502302285189 0.06199881572841812 5.317682421166311e-07 6.274277602855038 -0.05533806545388986 GRGFGS(ph)EEGSR ddPTM_A549_PD325901_60min_R1 1 GRGFGSEEGSR 11 1 Q9Y5S9 Q9Y5S9 RBM8A RNA-binding protein 8A 1 GRGFGS(0.996)EEGS(0.004)R 56.793 0.0040367 11588000.0 2756.2 2450.3 2958.3 2446.7 2646.3 3321.6 3288.5 2959.7 3233.7 3194.1 3517.1 True False 3036.0073949928005 2656.7953803285977 3159.0680277030433 2597.827102141134 2460.4330172393943 3294.549990872969 3413.6456670362486 2900.6664616602666 3097.798834494662 2992.4239808914854 3084.518996733846 0.9842725553668453 0.861332150374772 1.024168770251743 0.8422146548268747 0.7976715396613581 1.068091976208129 1.1067027535414469 0.9403950712353342 1.0043053188438384 0.9701428274749228 1.0 11.59082981613374 -7.278029715157388 24.88016676175211 1.009795060745049 0.9031496904879165 0.37766986522719204 0.07205953668195296 646.2624193848125 969184.1271548943 0.010347015558294344 0.0165677707769385 5.271937887048743e-08 7.278029715157388 -0.1066453702571325 GRGGPES(ph)PPSNR ddPTM_A549_MK2206_60min_R1 1 GRGGPESPPSNR 12 1 M0QXZ8;Q6ZW31-2;Q6ZW31 M0QXZ8 SYDE1 Rho GTPase-activating protein SYDE1 1 GRGGPES(0.998)PPS(0.002)NR 45.013999999999996 0.015040999999999999 4954100.0 428.94 316.96 235.36 291.38 453.32 301.19 287.84 222.83 462.96 668.73 654.87 True False 501.3345854238578 333.09191015437955 268.73758708179645 362.7681130805451 386.6372285093728 333.06172588625907 340.1368021386907 254.41683488825478 358.10029919520383 517.6634285468444 492.2477055074608 1.0184599741445808 0.6766753941717073 0.5459397455286327 0.7369625272434038 0.7854525763828323 0.6766140749054461 0.6909870748671989 0.5168471727582257 0.7274798748447925 1.0516319786867923 1.0 8.943240671146404 -10.339897536608955 0.8595787629634482 0.9897809925831521 0.7013789428692854 0.4712350369395548 0.12687646267991218 0.40418304351876155 0.5686561733819495 0.06666896281379275 0.02365710142024225 4.571960434633224e-11 10.339897536608955 -0.28840204971386674 GRHDS(ph)GPLFTFK ddPTM_A549_PD325901_60min_R1 1 GRHDSGPLFTFK 12 1 P35368 P35368 ADRA1B Alpha-1B adrenergic receptor 1 GRHDS(1)GPLFTFK 62.378 0.0021241 4094100.0 1703.5 1919.4 2362.5 2155.5 2744.9 2503.8 2678.8 2413.5 2226.8 1931.1 2272.9 True False 1876.4380659495812 2081.154574134887 2522.83345686659 2288.6403395043167 2552.1076933909267 2483.409882932245 2780.7431998956067 2365.3608491458767 2133.215339905595 1809.170016436412 1993.3477091002133 0.9413501003277525 1.044049949054954 1.265626385877948 1.1481390472199138 1.2803123517988413 1.2458488158361711 1.395011611471849 1.1866273196328543 1.0701672017214283 0.9076038305695607 1.0 10.960977672932605 -8.872173979301914 3.0329183803771014 1.0289145720407828 1.1969603477709312 0.33497968457550775 0.12066111632390318 0.24361183978067483 4.272591126561584 0.02207866793242872 0.023203533361826543 1.3422271543418826e-09 8.872173979301914 0.16804577573014834 GRIT(ph)PSQVK ddPTM_A549_PD325901_60min_R1 1 GRITPSQVK 9 1 C9JJN9;Q8N3P4-2;Q8N3P4-3;Q8N3P4 C9JJN9 VPS8 Vacuolar protein sorting-associated protein 8 homolog 1 GRIT(0.996)PS(0.004)QVK 45.879 0.016812999999999998 4936900.0 1717.4 1724.9 1652.6 1755.1 2058.3 1820.7 2039.5 1876.2 1973.0 2070.4 2346.7 True False 1891.749183716943 1870.2633765370758 1764.755373891102 1863.5085408786947 1913.732108749515 1805.8728228511604 2117.1142885572235 1838.7777191495727 1890.081671292319 1939.6745906633266 2058.0707769569563 0.9191856785965666 0.9087458980892918 0.8574804101248901 0.9054637778949762 0.9298670046611035 0.8774590471185382 1.0286887663249213 0.8934472709769349 0.9183754477515956 0.9424722474954486 1.0 11.007076881961519 -14.999999999894513 0.16586329379557269 1.3400274107691506 0.8911636202756558 0.17843125048154973 0.043418057622705834 39.81816156144932 0.4206286665010197 4.400085986865453 0.055375199726862535 1.0000000002428931e-15 14.999999999894513 -0.4488637904934948 GRKDDDS(ph)DDESQSSHTGK ddPTM_A549_MK2206_60min_R1 2 GRKDDDSDDESQSSHTGK 18 2 O94874;O94874-2;O94874-3 O94874 UFL1 E3 UFM1-protein ligase 1 1 GRKDDDS(0.675)DDES(0.091)QS(0.107)S(0.127)HTGK;GRKDDDS(0.951)DDES(0.016)QS(0.016)S(0.018)HTGK 62.273999999999994 0.00059707 13743900.0 515.74 424.58 192.16 554.17 617.3299999999999 345.06 352.71 547.45 665.1800000000001 566.61 795.97 True False 602.7843033676047 446.18930847219394 219.41117748826477 689.9416748776364 526.5215747721059 381.5740201677097 416.79284144781 625.052713995311 514.5177920741874 438.61240747226475 598.3086813455704 1.0074804564292277 0.7457510184688169 0.36671902703269904 1.153153374485537 0.8800166054552 0.6377544435918365 0.6966184085954776 1.0446993892677512 0.8599537464792572 0.7330871524141089 1.0 9.224746186151076 -9.591457780284076 0.3630450478325566 1.0169378196783017 0.776519746983362 0.0 0.21694537821550922 2.3462436788774985 0.7037548339293072 0.21859322497044348 0.09478229042635204 2.561782294338515e-10 9.591457780284076 -0.24041807269493964 GRKDDDS(ph)DDESQSSHTGK ddPTM_A549_PD325901_60min_R1 3 GRKDDDSDDESQSSHTGK 18 2 O94874;O94874-2;O94874-3 O94874 UFL1 E3 UFM1-protein ligase 1 1 GRKDDDS(0.766)DDES(0.047)QS(0.156)S(0.031)HTGK;GRKDDDS(0.812)DDES(0.18)QS(0.007)S(0.001)HTGK;GRKDDDS(0.978)DDES(0.006)QS(0.007)S(0.008)HTGK 72.145 0.00017051 28250800.0 3068.17 3397.2 2718.0899999999997 3128.0000000000005 4071.4 4141.89 3158.9 4418.36 3938.1499999999996 3588.5699999999997 4164.97 True False 3379.6483597326232 3683.493966474439 2902.555932602969 3321.209455796571 3785.438909567497 4108.1598210792545 3279.1136681164076 4330.232343663636 3772.6432507855275 3361.987077770814 3652.7050939201526 0.9252453381352833 1.0084290605900634 0.7946318845817062 0.909246536580424 1.0363384976981243 1.1246897067921515 0.897721985159552 1.1854864360309878 1.0328354339541423 0.9204102141634066 1.0 11.834749565130842 -6.759105617670993 24.168533510623572 1.0294547316976552 0.9082656378975694 0.29266935986631737 0.08884144647232271 35.076263227652795 363237.8333518115 0.011159813805244312 0.022381071559613632 1.7413833284811155e-07 6.759105617670993 -0.1211890938000858 GRLDSSEMDHS(ph)ENEDYTMSSPLPGKK ddPTM_A549_PD325901_60min_R1 4 GRLDSSEMDHSENEDYTMSSPLPGKK 26 2 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GRLDS(0.004)S(0.004)EMDHS(0.99)ENEDY(0.001)T(0.001)MSSPLPGKK;GRLDS(0.007)S(0.007)EMDHS(0.985)ENEDY(0.001)TMSSPLPGKK;GRLDS(0.001)S(0.001)EMDHS(0.998)ENEDYTMSSPLPGKK;GRLDS(0.312)S(0.312)EMDHS(0.376)ENEDYTMSSPLPGKK 93.04299999999999 2.4279e-09 44586600.0 4403.46 3773.2299999999996 4799.7 5198.5 5817.5 5900.199999999999 5092.8 6176.900000000001 5331.1 5253.5 5324.3 True False 4850.496017544084 4091.2133342518378 5125.43650494077 5519.599538349893 5408.898869285481 5852.150727405076 5286.6092908870905 6053.696883815689 5107.052406399635 4921.7931134320825 4669.444853518527 1.0387735950857477 0.876166966865241 1.0976543605774984 1.1820676143526474 1.1583601560707497 1.2532861851865227 1.1321708375897226 1.2964489513681905 1.0937172547506073 1.0540424542595048 1.0 12.18903532395816 -5.787638190606384 22.47718776618767 1.101153563515575 0.9574705062602962 0.2945853516224489 0.09429445291498219 73.90113906427923 63403.766656869295 0.015419771952644734 0.047981020515839815 1.63065395970405e-06 5.787638190606384 -0.14368305725527875 GRLDYLSSLK ddPTM_A549_MK2206_60min_R1 1 GRLDYLSSLK 10 1 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 66.595 0.005049199999999999 2336100.0 1113.0 1129.6 1136.9 1142.1 1808.0 1204.6 1425.4 1214.3 2048.7 1661.5 1680.9 False True 1300.8471897625632 1187.0918150882987 1298.1295154371783 1421.9145512708176 1542.0455950431176 1332.0699724512353 1684.3767293235476 1386.4307436377856 1584.6727211016375 1286.165996038135 1263.4861395200437 1.0295698140833676 0.9395368718007745 1.0274188808515892 1.125389908757492 1.2204689444625718 1.0542814288071607 1.3331184859403256 1.0973058589819151 1.2542066521628816 1.0179502218573657 1.0 10.30319412262473 -6.184601707870477 3.398961458779774 1.1391064367315036 0.98482199883149 0.29205017043280557 0.09762576525264646 0.2636201131124845 5.897994093057549 0.01547876275396701 0.04455868399113919 6.537298144200665e-07 6.184601707870477 -0.15428443790001356 GRLGEEDS(ph)DVDIEGYDDEEEDGKPK ddPTM_A549_PD325901_60min_R1 2 GRLGEEDSDVDIEGYDDEEEDGKPK 25 2 H7C2K9;P21675-3;P21675-5;P21675-9;P21675-4 H7C2K9 TAF1 1 GRLGEEDS(1)DVDIEGYDDEEEDGKPK;GRLGEEDS(1)DVDIEGYDDEEEDGKPK 124.12 4.6647e-18 14543400.0 3456.8 3969.3 4064.8 4294.3 4183.299999999999 4268.799999999999 3687.2 3818.1000000000004 4204.3 3968.0 4641.299999999999 True False 3807.7317912383396 4303.806841259559 4340.661771628068 4559.549157937088 3889.4794396015404 4234.03630811613 3827.518413713259 3741.9450002584963 4027.607891847085 3717.459802816883 4070.4495236248003 0.9354573172172624 1.057329618333395 1.0663838837541066 1.1201586290343521 0.9555405163550331 1.040188874359423 0.9403183583283433 0.9192952715763527 0.9894749630159855 0.9132799169332103 1.0 11.990972413230441 -6.791047180766399 24.998434450008624 0.9860842493147203 1.0472645480221159 0.2759786920075826 0.05576118959789941 218.10848180177936 184152.55120870165 0.00726490636304469 0.013730630046476957 1.6179042626498817e-07 6.791047180766399 0.06118029870739561 GRLGS(ph)PGAPQQEDAMDDKELIEYFK ddPTM_A549_PD325901_60min_R1 1 GRLGSPGAPQQEDAMDDKELIEYFK 25 2 H0YGG4 H0YGG4 EIF2B1 1 GRLGS(1)PGAPQQEDAMDDKELIEYFK 61.89 7.1611e-05 1672200.0 972.59 1134.8 1107.0 1136.4 1204.8 1277.8 1431.8 914.75 1557.2 1265.3 1147.7 True False 1071.326620817084 1230.433578580947 1182.1276769317735 1206.5928470483448 1120.179004334362 1267.3940204532391 1486.287932511024 896.5045936425075 1491.7562993088693 1185.4087420625515 1006.5401758697315 1.0643654833661973 1.2224386150485782 1.174446589685623 1.1987527929580672 1.1129004397330067 1.2591588998006056 1.4766305092856846 0.8906793937637468 1.4820633443864992 1.177706335505449 1.0 9.975189042983185 -7.2713294714443215 23.862173799891913 1.2275803420234626 1.1619083190643111 0.026270094392081833 0.16859372647926069 1513.981329010407 3652833.693576787 0.030500528885404218 0.04915155020081994 5.3539033700502065e-08 7.2713294714443215 -0.06567202295915142 GRLGS(ph)VDSFER ddPTM_A549_MK2206_60min_R1 2 GRLGSVDSFER 11 1 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 GRLGS(1)VDSFER;GRLGS(1)VDSFER 128.76 3.0427e-08 79348000.0 1893.27 2322.4 2335.0 1777.27 3054.6000000000004 2180.02 1993.44 1604.79 4059.3 3487.3 3499.1 True False 2212.8076899926014 2440.600240227573 2666.138111131861 2212.7012297846813 2605.272386404152 2410.708269419841 2355.6222444946916 1832.273896963255 3139.875031370078 2699.516507964965 2630.1768997528616 0.8413151564826391 0.9279224680503043 1.013672544756354 0.8412746800386669 0.9905312401796815 0.9165574641182339 0.8956136162233165 0.6966352328375405 1.193788536301535 1.0263630968010626 1.0 11.360944119850194 -8.781285400122078 24.99991373399606 1.09151124589686 0.8985379206083841 0.433863701080201 0.09210323923714439 164.00312693589973 206592.92618170654 0.017656161675518003 0.018808614772510727 1.6546822183309328e-09 8.781285400122078 -0.192973325288476 GRLGS(ph)VDSFER ddPTM_A549_PD325901_60min_R1 2 GRLGSVDSFER 11 1 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 GRLGS(1)VDSFER;GRLGS(0.999)VDS(0.001)FER 145.92 5.6992e-12 70036000.0 3061.9 2322.29 2968.2 2542.63 3247.4 3235.5 3124.5 4220.1 5078.0 6917.9 6726.6 True False 3372.7418339483565 2517.9975283774647 3169.6399012365755 2699.682480368297 3019.3138269218157 3209.151160726608 3243.4045572920036 4135.926794895593 4864.589319220678 6481.102613383797 5899.270843430636 0.5717218150280734 0.4268319924964082 0.5372935037838197 0.4576298583365831 0.5118113589044807 0.5439911551611982 0.5497975331822277 0.7010911864643944 0.8246085742338533 1.098627743223738 1.0 12.52632093141197 -8.72551964906715 0.7147050331930958 0.9643393924316931 0.48539384970966837 0.9214576771854851 0.059893020030800666 0.0847298910805239 0.09069722210490463 0.012282412936037443 0.012722611916630294 1.881396583045888e-09 8.72551964906715 -0.4789455427220247 down GRLPNNSS(ph)RPS(ph)TPTINVLESK ddPTM_A549_MK2206_60min_R1 1 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 GRLPNNS(0.479)S(0.514)RPS(0.509)T(0.474)PT(0.024)INVLESK 51.586000000000006 0.0034823999999999996 10259000.0 2725.0 3164.5 3094.2 2176.8 3489.9 2587.7 2488.4 2886.2 3232.3 3256.6 3269.3 True False 3184.913380146434 3325.5595333276588 3533.004087136701 2710.1160977202667 2976.5403330425765 2861.5286964237603 2940.510069628674 3295.3276886167987 2500.1892109224527 2520.931798193073 2457.442581910214 1.2960275872125337 1.3532603194100439 1.437675131514338 1.1028197027552298 1.2112349460180911 1.1644335934797072 1.1965732551695931 1.340958162308428 1.0173947620696844 1.0258354830954006 1.0 11.262941993085064 -7.887486485682041 0.31649082047460225 0.9633019584390861 1.3838604472816283 0.5192318195722265 0.09879742382554248 0.8362939108759302 0.20473072510873463 0.06442095664350789 0.1259593406452382 1.2957270171507694e-08 7.887486485682041 0.4205584888425422 GRLPNNSS(ph)RPS(ph)TPTINVLESK ddPTM_A549_PD325901_60min_R1 2 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 GRLPNNS(0.405)S(0.595)RPS(0.59)T(0.402)PT(0.007)INVLESK;GRLPNNS(0.452)S(0.532)RPS(0.497)T(0.462)PT(0.056)INVLESK 93.96600000000001 5.4185e-07 26942000.0 5485.0 5886.3 5578.9 5622.6 6573.7 5880.1 5429.1 5929.799999999999 5526.9 6757.9 7138.9 True False 6041.833162156414 6382.35915897165 5957.517702651015 5969.895232148912 6111.98599003386 5832.21441514094 5635.707371417515 5811.525487161894 5294.623613312479 6331.205040689573 6260.860557215675 0.9650164073999651 1.0194060545903625 0.9515493354639474 0.9535263048253928 0.9762213890852055 0.9315355871357465 0.9001490002715893 0.9282311008291152 0.845670266080339 1.0112355933870507 1.0 12.612145254327933 -7.314854669295296 4.52886575388472 0.9232846908122839 0.9735590693210066 0.10686194337614197 0.04601970867747378 0.3294783348505746 14.55764795512102 0.008566233561424653 0.014055229202074972 4.8433441635281704e-08 7.314854669295296 0.05027437850872263 GRLPNNSS(ph)RPST(ph)PTINVLESK ddPTM_A549_MK2206_60min_R1 1 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 GRLPNNS(0.364)S(0.388)RPS(0.333)T(0.529)PT(0.385)INVLESK 48.118 0.007272800000000001 12002000.0 2802.9 3135.1 3569.7 2820.3 4229.5 3236.6 3049.0 3053.7 4498.2 3523.0 4253.7 True False 3275.9609956742906 3294.663198905214 4075.937137176618 3511.27362660808 3607.3461527847694 3579.0948637187985 3602.9638331047377 3486.571326564032 3479.364882149356 2727.1518531702363 3197.388893852348 1.0245738333466454 1.0304230446411746 1.2747705307332067 1.0981690820779548 1.1282162641274731 1.11938052659167 1.1268456708635577 1.0904433093101995 1.0881894563527028 0.8529309207315253 1.0 11.642678512393488 -10.069083039146516 0.5522976797294663 0.9960818786909281 1.1176765519580045 0.3928743420142278 0.07713851830433148 0.8418342772720867 0.4867252217630589 0.0476913575656495 0.015335514332928044 8.529370128587992e-11 10.069083039146516 0.1215946732670764 GRLPNNSSRPS(ph)TPTINVLESK ddPTM_A549_MK2206_60min_R1 1 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 GRLPNNS(0.199)S(0.199)RPS(0.295)T(0.295)PT(0.013)INVLESK 41.086999999999996 0.027627 3248300.0 985.97 1190.6 1154.1 1386.4 1886.5 1226.3 1661.0 1475.3 2334.2 2083.6 2249.2 True False 1152.3776313478822 1251.196454536233 1317.7687340716407 1726.0680622378602 1608.9983490314385 1356.0662520479398 1962.7821996677512 1684.4282929167628 1805.507426951455 1612.9133128769536 1690.661565237958 0.6816134317134529 0.7400632274739912 0.7794396945944452 1.0209423918588454 0.9516974787351804 0.8020920803609063 1.1609551195963295 0.9963131164454443 1.0679295395807573 0.9540131189117903 1.0 10.723372176214188 -5.764034183213744 0.6112123674150576 1.032398388024565 0.5459513575752042 0.6295639360577494 0.08748461041777865 0.8726173927658163 0.3129117868467305 0.014510274550252951 0.2630752485257189 1.721733052460019e-06 5.764034183213744 -0.4864470304493609 GRLPNNSSRPS(ph)TPTINVLESK ddPTM_A549_PD325901_60min_R1 2 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 GRLPNNS(0.063)S(0.063)RPS(0.413)T(0.413)PT(0.048)INVLESK;GRLPNNS(0.086)S(0.086)RPS(0.405)T(0.405)PT(0.017)INVLESK 108.44 1.0903e-10 45041900.0 5522.9 5281.2 5845.299999999999 6354.1 6834.4 6336.6 6280.700000000001 6513.9 6326.6 6463.299999999999 7551.5 True False 6083.580742255909 5726.265258373011 6241.99720864435 6746.578325791871 6354.375321400035 6284.9968304930335 6519.715475430917 6383.975154444302 6060.715003344142 6055.206134966318 6622.713372902572 0.9185933921204302 0.8646403575009816 0.9425135676540138 1.0187030520445146 0.9594821583853431 0.9490063175931279 0.9844477796830102 0.9639516003463038 0.9151407681543494 0.9143089537502468 1.0 12.693206705260673 -6.6333314182499 0.006911506261730986 1.877553385702344 4.659136534839108e-06 0.023139809395050892 0.04158865178592764 9570.864552508752 15.951649301688455 2098.8295803768215 2235.406497082671 2.3263153253500894e-07 6.6333314182499 -1.8775487265658093 GRLPNNSSRPST(ph)PTINVLESK ddPTM_A549_MK2206_60min_R1 2 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 GRLPNNS(0.019)S(0.019)RPS(0.173)T(0.788)PT(0.001)INVLESK;GRLPNNS(0.009)S(0.009)RPS(0.199)T(0.752)PT(0.031)INVLESK 114.21 5.6529e-15 51573000.0 3440.3 5208.799999999999 4506.4 5097.0 7202.7 5584.700000000001 5322.1 5921.799999999999 7906.1 8053.5 7929.2 True False 4020.938532740471 5473.9056714163735 5145.475282228958 6345.765228813022 6143.192371358993 6175.669247176165 6289.0566796217545 6761.233284751904 6115.380973447389 6234.208756601332 5960.160805212878 0.6746359140551504 0.9184157693578979 0.8633114861143715 1.0646969832194606 1.0307091657637881 1.0361581589836972 1.055182382683571 1.1344045078177072 1.0260429497302745 1.0459799593240449 1.0 12.541135539804818 -4.779338814387663 0.8466455384734899 1.029807556550047 0.15798774519102343 0.8190529991927714 0.05121942733366461 1.4642461375488642 0.43849761798149756 0.008046454147888054 1.444183719330311 1.6621154467955204e-05 4.779338814387663 -0.8718198113590236 GRLPNNSSRPST(ph)PTINVLESK ddPTM_A549_PD325901_60min_R1 1 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 GRLPNNS(0.011)S(0.011)RPS(0.163)T(0.814)PT(0.002)INVLESK 107.03 2.3277000000000001e-10 36098000.0 3581.3 3664.9 3558.6 3666.1 4297.2 3667.8 3482.3 3402.6 3269.0 3443.9 3553.4 True False 3944.8709395862825 3973.7539849676664 3800.1079956001895 3892.5466706828015 3995.37949653521 3637.930652855215 3614.8208320876765 3334.7324737119375 3131.6152982537224 3226.4515662603503 3116.3543268585054 1.2658608507983677 1.2751290669098843 1.219408192081596 1.2490706326731307 1.2820684291579967 1.1673674657279725 1.1599518068061467 1.07007487722796 1.0048970591256872 1.0353288579713047 1.0 11.605643560596917 -8.081379644595449 1.0688080683820254 0.9992278709691591 1.2574866114400352 0.9440643493945866 0.0251186970835548 0.05705617736632511 0.1291689636107601 0.0041437875750602055 0.005943522552656312 8.291256588377305e-09 8.081379644595449 0.25825874047087605 GRLS(ph)GDEGS(ph)EDGDDYDTPPILK ddPTM_A549_PD325901_60min_R1 2 GRLSGDEGSEDGDDYDTPPILK 22 1 A0A087WXS2;E0YMJ8;A0A0C4DGS8;A0A087WZC2;P35680-3;P35680-4;P35680-2;P35680 A0A087WXS2 HNF1B Hepatocyte nuclear factor 1-beta 2 GRLS(1)GDEGS(0.999)EDGDDY(0.001)DTPPILK;GRLS(0.998)GDEGS(0.588)EDGDDY(0.414)DTPPILK 108.72 9.7627e-11 71301000.0 5590.5 5884.6 6145.9 5599.5 5944.599999999999 6195.6 5901.8 6500.7 6276.799999999999 5714.8 6512.1 True False 6158.043444491418 6380.515894005494 6562.997732298999 5945.3683976128195 5527.0718037566785 6145.1450877446305 6126.396228588882 6371.038438799504 6013.007924159972 5353.96655270613 5711.1529836030995 1.0782487287893276 1.1172027631415506 1.1491546017313095 1.0410101803755143 0.9677681231136823 1.0759902782130921 1.072707428110919 1.1155432987158558 1.0528535904087157 0.9374580873735193 1.0 12.479566314980294 -14.999999999546237 0.0940145292255517 0.7507729182210139 1.1326417500885233 0.3895974810463374 0.04847413535818765 115.96634241947297 0.7911127540104934 5.7207051923708665 0.4068036382563733 1.0000000010448284e-15 14.999999999546237 0.3818688318675094 GRLS(ph)GIEER ddPTM_A549_MK2206_60min_R1 2 GRLSGIEER 9 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 GRLS(1)GIEER;GRLS(1)GIEER 90.61399999999999 0.00029467 16660300.0 871.19 1028.47 717.8 704.98 1216.78 936.6 928.64 892.56 1082.04 1486.6999999999998 1273.72 True False 1018.2255734494579 1080.8147300494545 819.594833477708 877.7001316477554 1037.7932738587187 1035.7103903352372 1097.3618674891384 1019.0831133503597 836.9596676628188 1150.8534374420067 957.4201711163482 1.063509631578172 1.1288823472240288 0.8560450867899133 0.9167345311143387 1.0839475761709259 1.081772059520746 1.1461653938308178 1.064405309282457 0.8741821959808169 1.2020359212822056 1.0 9.903008391135279 -8.74538999291446 24.869809468850576 0.9405860326057393 1.0412644356732774 0.0 0.11649566273857692 283.43502428635134 439205.0669815215 0.01634943641110743 0.01850910659116003 1.7972562687478158e-09 8.74538999291446 0.10067840306753817 GRLS(ph)GIEER ddPTM_A549_PD325901_60min_R1 2 GRLSGIEER 9 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 GRLS(1)GIEER;GRLS(1)GIEER 88.021 0.00031521 17221000.0 1821.62 1646.3000000000002 2524.3 1876.2800000000002 2427.26 2290.67 2097.78 2224.0 2579.6 2382.44 2431.79 True False 2006.549521394233 1785.0394786903537 2695.6141778490296 1992.1735542589486 2256.7776311924163 2272.015542989219 2177.612165849263 2179.6405753057506 2471.1883828006426 2232.012331810247 2132.6952463869093 0.9408514999007077 0.8369876013530136 1.2639471965888167 0.9341107491255375 1.0581810200101118 1.0653259282301764 1.0210611054431942 1.0220122068534514 1.1587161302052833 1.0465688126756951 1.0 11.058462109722617 -5.722390764818957 24.999982558207847 1.0675250937205136 0.8889193124286874 0.38452952045119504 0.08496639209801918 121.17636796296725 77578.77602314168 0.01166835524565321 0.04518999297512338 1.8950000910944663e-06 5.722390764818957 -0.17860578129182625 GRLS(ph)GLGGPR ddPTM_A549_MK2206_60min_R1 1 GRLSGLGGPR 10 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GRLS(1)GLGGPR 46.88 0.009558200000000001 2973500.0 398.81 496.13 511.15 466.14 651.91 465.33 443.81 639.24 577.84 614.72 884.97 True False 466.1193780316328 521.3808978574345 583.6387561049465 580.3443209258196 556.014902579955 514.5709117389451 524.4445322303094 729.8542275903957 446.96016262086744 475.85432505841817 665.2075250705295 0.7007127256749115 0.7837868307370011 0.8773784632743976 0.8724259709243184 0.8358517930490981 0.7735494448659267 0.7883923624807228 1.097182758888682 0.6719108635661899 0.7153471768196926 1.0 9.37766067878555 -11.134862464951555 1.4995625360289708 1.0000245006033879 0.8082925533640185 0.0 0.13533435084315054 0.4274609944000326 1.721225470552338 0.08091724580826315 0.017361817543455324 7.330566452720348e-12 11.134862464951555 -0.19173194723936937 GRLS(ph)GLGGPR ddPTM_A549_PD325901_60min_R1 2 GRLSGLGGPR 10 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GRLS(1)GLGGPR;GRLS(1)GLGGPR 61.375 0.0021054000000000003 9890300.0 1822.27 1575.08 1203.44 1274.22 1961.93 1704.8 1561.37 1828.24 1663.6599999999999 1674.6599999999999 1585.21 True False 2007.2655089157288 1707.8175193437407 1285.1126752726047 1352.9256754364146 1824.1308050910645 1690.9166740246392 1620.7887897644482 1791.774318973466 1593.7421557334915 1568.921681800736 1390.2392194741283 1.4438274225028673 1.2284342834104045 0.9243824064744133 0.9731603428280293 1.3120985076086833 1.2162774940734624 1.165834460041724 1.2888244655126493 1.1463797981014665 1.1285264146081249 1.0 10.441117434556709 -10.112099783600335 0.8450308500629726 1.0102644528293643 1.1817159520416518 0.07858715263071725 0.14324339099249353 0.7368428719733386 1.0460230393799579 0.06625120229324598 0.028608193752859012 7.725030742194968e-11 10.112099783600335 0.17145149921228753 GRLS(ph)KEDIER ddPTM_A549_MK2206_60min_R1 1 GRLSKEDIER 10 2 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 GRLS(1)KEDIER 50.563 0.0055303999999999996 3737800.0 607.6 497.16 362.5 516.4 757.94 463.63 497.87 501.91 652.24 760.51 710.72 True False 710.1480256062289 522.4633204579488 413.9079508716483 642.9180231820773 646.4480300370469 512.6910188673135 588.326534466335 573.05727953491 504.50868141325384 588.7102628028658 534.2286091258762 1.3292961355405475 0.9779770523948949 0.7747768348626989 1.2034511297214923 1.2100588006598674 0.959684693236846 1.1012636246287442 1.0726817503700645 0.9443685208823781 1.1019819095164791 1.0 9.061313427333001 -8.751003844769354 24.006875925859898 0.9737295816186261 1.0704927603552974 0.012632973720933305 0.14503096806880414 237.55740733440422 546497.239564648 0.023271949215301624 0.026237787174763563 1.7741737742223769e-09 8.751003844769354 0.09676317873667128 GRLS(ph)PVPVPR ddPTM_A549_MK2206_60min_R1 10 GRLSPVPVPR 10 1 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 1 GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR 126.32 2.0964e-06 5427700200.0 18644.61 22333.99 19859.609999999997 20259.170000000002 25941.609999999997 20068.17 19317.47 19447.559999999998 30826.95 30714.75 31049.15 True False 21791.364351050295 23470.694694815797 22676.001324717505 25222.667559468704 22125.63353364297 22191.770429226868 22827.204249618182 22204.31118565465 23844.695045523575 23776.2666426797 23338.789142054124 0.9336972975939216 1.0056517736185375 0.9716014479884758 1.080718772767008 0.9480197708189937 0.950853546606647 0.9780800585102285 0.9513908819564567 1.0216766131434754 1.018744652859359 1.0 14.510442092948221 -8.78339294493794 24.98886014491098 1.010236179251592 0.9798321925643235 0.14649190993793604 0.03815370467291376 374.45549781469765 426225.70999126515 0.006487453482999872 0.006909220946396787 1.6466718264907828e-09 8.78339294493794 -0.030403986687268403 GRLS(ph)PVPVPR ddPTM_A549_PD325901_60min_R1 10 GRLSPVPVPR 10 1 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 1 GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR 113.07 3.2732e-05 4983836300.0 14655.67 16281.019999999997 14937.819999999998 17741.59 17413.94 15760.389999999998 15487.320000000002 16290.749999999998 19784.230000000003 18122.949999999997 17688.43 True False 16143.50282946598 17653.07869364465 15951.590293608833 18837.44772022566 16190.84492923167 15632.04260918064 16076.69843758668 15965.818211403852 18952.767614613094 16978.663844118 15512.86524619625 1.0406525534297646 1.137963774807699 1.0282813677840823 1.2143113100814562 1.0437043494077705 1.0076824855429987 1.0363461670324687 1.0291985366996381 1.2217451330765803 1.0944892239221353 1.0 13.921177558167622 -11.29232109227332 1.8501280302347982 0.9996605752052578 1.1062698608839017 0.0 0.07917628801545096 0.5066729014682173 3.1311197415332446 0.06368704718059655 0.012607710184327743 5.101277015372707e-12 11.29232109227332 0.10660928567864392 GRLS(ph)VASTPISQR ddPTM_A549_PD325901_60min_R1 1 GRLSVASTPISQR 13 1 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 GRLS(1)VASTPISQR 90.37899999999999 5.1595e-05 7157700.0 1621.9 1542.8 1875.8 1976.2 2233.3 2236.4 1826.8 2066.6 1752.4 2047.3 2205.1 True False 1786.5540940203255 1672.8171704570716 2003.103068101735 2098.2653857241626 2076.4407124667423 2218.1874998760563 1896.3198736633176 2025.3800417836633 1678.752722135154 1918.0331286055957 1933.8866792806 0.9238152954675287 0.8650026852035376 1.0357913364638736 1.0849991409552038 1.0737137468877815 1.1470100723281342 0.9805744534983523 1.0473106120866909 0.8680719196843762 0.9918022338925765 1.0 10.917287543784091 -11.710613282641036 4.160742647461912 1.0012352418856498 0.9730179764483079 0.0 0.08925557830703211 1.568419507674592 48.39395520799324 0.10734265758863737 0.014589707487680582 1.9470930982471785e-12 11.710613282641036 -0.028217265437341932 GRLT(ph)PSDMPLLELK ddPTM_A549_PD325901_60min_R1 1 GRLTPSDMPLLELK 14 1 Q9H1I8-2;Q9H1I8-3;Q9H1I8 Q9H1I8-2 ASCC2 Activating signal cointegrator 1 complex subunit 2 1 GRLT(0.928)PS(0.072)DMPLLELK 56.215 0.0041029 1061500.0 1382.3 1171.4 1182.1 1308.4 1339.1 1286.3 1451.1 1369.0 1301.1 1861.5 1250.4 True False 1522.630078404524 1270.117989028657 1262.3244145447607 1389.216896408003 1245.0462356442092 1275.824799271406 1506.3224045723887 1341.6942210402767 1246.4192916971297 1743.9645723144224 1096.6087269386708 1.3884898423662455 1.1582234919599448 1.1511165136070978 1.266830057322439 1.1353605028476488 1.1634275452403526 1.373618837392885 1.22349402123198 1.136612595794924 1.5903252723356778 1.0 10.098833144588577 -9.572717343909305 0.827582269069263 1.019821832974309 1.2267244683500715 0.0 0.19067280085152397 0.31500511685888993 0.4592642955597934 0.028195917837512602 0.01796514178685118 2.6747466736100974e-10 9.572717343909305 0.2069026353757626 GRLT(ph)PSPDIIVLS(ph)DNEASSPR ddPTM_A549_MK2206_60min_R1 3 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 2 GRLT(0.98)PS(0.02)PDIIVLS(0.622)DNEAS(0.18)S(0.198)PR;GRLT(0.793)PS(0.207)PDIIVLS(0.489)DNEAS(0.255)S(0.255)PR;GRLT(0.787)PS(0.213)PDIIVLS(0.428)DNEAS(0.296)S(0.276)PR 60.993 0.0010412000000000002 6331200.0 1689.85 1963.0299999999997 1695.46 1730.78 2184.44 1805.63 2043.66 1880.42 2858.7599999999998 2735.5 2314.49 True False 1975.0553671341122 2062.9398422209497 1935.9017224409529 2154.821177697667 1863.1117697101708 1996.7005681198102 2414.9665684364795 2146.975293544728 2211.255424501645 2117.5486501127402 1739.7382563256256 1.135260065675329 1.1857759836689081 1.112754585583253 1.2385892934542393 1.0709149855939326 1.1477017079206477 1.3881206323168145 1.2340794862321407 1.2710276482462808 1.2171650778003011 1.0 10.764654553548866 -10.885152184819415 1.14946697679034 1.0006488096995247 1.2033078011292482 0.0 0.10342669563627326 0.3723450986624135 0.8780300422123721 0.059362731786021625 0.01445321422871669 1.3027102047096362e-11 10.885152184819415 0.20265899142972343 GRLT(ph)PSPDIIVLS(ph)DNEASSPR ddPTM_A549_PD325901_60min_R1 2 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 2 GRLT(0.99)PS(0.01)PDIIVLS(0.652)DNEAS(0.165)S(0.183)PR;GRLT(0.985)PS(0.015)PDIIVLS(0.979)DNEAS(0.01)S(0.011)PR 101.86 6.383099999999999e-10 14642500.0 2167.5 2489.1000000000004 2430.9700000000003 2851.9 2899.1 2985.5 2582.9 2669.7 2350.1099999999997 3145.6000000000004 2502.3999999999996 True False 2387.543004370835 2698.8651924972105 2595.950242810149 3028.0553858651638 2695.4772173520464 2961.187077839371 2681.193672917113 2616.4507391608645 2251.3430494276695 2946.986279168547 2194.620664020577 1.0879069187277322 1.2297638661402424 1.182869680108785 1.3797625418862696 1.2282201027005246 1.3492933546039036 1.2217116683869764 1.1922109283193791 1.0258461001197248 1.3428226241931147 1.0 11.099755878896264 -8.692247839428179 2.5940171992037704 1.0097606020884788 1.2458248236958573 0.0 0.12429960830655411 0.11302806653501003 1.5123158616205559 0.012798566785196999 0.014200921596432626 2.0311975338424704e-09 8.692247839428179 0.2360642216073785 GRNDS(ph)GEENVPLDLTR ddPTM_A549_MK2206_60min_R1 4 GRNDSGEENVPLDLTR 16 1 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR 187.78 2.5207e-34 126472400.0 4169.53 4371.91 4477.64 3897.1 6198.18 5251.570000000001 4414.36 5132.07 7306.48 7172.030000000001 7110.8 True False 4873.244728778701 4594.421545062575 5112.6366817680755 4851.889674947469 5286.4359326794 5807.287651689968 5216.392071598632 5859.556638805213 5651.573946051008 5551.863441808834 5344.992111903815 0.9117403032130791 0.8595749907339159 0.9565283867083243 0.9077449645139495 0.9890446649876237 1.0864913418219224 0.9759400879154193 1.0962703996803687 1.0573587065665457 1.038703767110207 1.0 12.383972103491736 -6.8829713581459275 3.4816757102055185 1.0331612517693778 0.9080958067980845 0.7156591007529993 0.03899395641115926 0.10565822218051811 2.5022168790318813 0.005842850391614244 0.01160527520540898 1.309268266795299e-07 6.8829713581459275 -0.12506544497129324 GRNDS(ph)GEENVPLDLTR ddPTM_A549_PD325901_60min_R1 3 GRNDSGEENVPLDLTR 16 1 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR 202.34 1.3746999999999999e-39 124797300.0 10985.4 11135.4 10539.2 11818.0 12882.300000000001 11767.7 11645.1 12427.3 12153.5 13979.4 14177.599999999999 True False 12100.629720975949 12073.819237689704 11254.453489358038 12547.971019374638 11977.491689522365 11671.867752768507 12088.260652943238 12179.427752471753 11642.730659934723 13096.738298260678 12433.845079211214 0.9732009401667401 0.9710446897779468 0.905146671657904 1.0091786522540993 0.9632974846653148 0.9387174826782507 0.9722061499024323 0.9795383226090829 0.9363741132178656 1.0533136141576822 1.0 13.601984888240189 -11.034952519001031 1.3230169899817532 1.0000495783780368 0.9584843079444124 0.3400614037456384 0.03073970216043159 0.4854031411425334 1.5111502442779496 0.018005192733430337 0.00401915416764701 9.226722965174934e-12 11.034952519001031 -0.041565270433624346 GRNDS(ph)GEENVPLDLTREPSDNLR ddPTM_A549_MK2206_60min_R1 4 GRNDSGEENVPLDLTREPSDNLR 23 2 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 GRNDS(1)GEENVPLDLTREPSDNLR;GRNDS(1)GEENVPLDLTREPSDNLR;GRNDS(1)GEENVPLDLTREPSDNLR;GRNDS(1)GEENVPLDLTREPSDNLR 139.93 7.091100000000001e-24 136666000.0 2889.24 3183.84 2951.1099999999997 3024.58 4038.13 2786.14 2677.05 2527.64 4610.29 4316.77 4562.74 True False 3376.8730768639566 3345.8838567198395 3369.621773508497 3765.602235778556 3444.1264262784634 3080.9674855099483 3163.435332703521 2885.9407105728515 3566.0666761203047 3341.6086588730304 3429.6857327822486 0.9846013133467336 0.9755657274188715 0.9824870370192705 1.097943814439174 1.0042105005010182 0.8983235566048755 0.9223688638484265 0.8414592284616418 1.0397648513490536 0.9743191998417395 1.0 11.743860670818655 GRNDS(ph)GEENVPLDLTREPSDNLR ddPTM_A549_PD325901_60min_R1 3 GRNDSGEENVPLDLTREPSDNLR 23 2 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 GRNDS(1)GEENVPLDLTREPSDNLR;GRNDS(1)GEENVPLDLTREPSDNLR;GRNDS(1)GEENVPLDLTREPSDNLR 185.44 2.2797000000000003e-50 164977000.0 5382.5 5422.7 5274.5 5139.7 5075.9 6228.299999999999 5150.0 5527.5 5557.2 6738.7 6598.6 True False 5928.92743761293 5879.689959967305 5632.459288145111 5457.167595894383 4719.38629490437 6177.578789786281 5345.9860681881355 5417.249676260136 5323.650209683568 6313.217331966265 5787.014031971784 1.024522733979408 1.016014464019529 0.9732928340984146 0.9430023092643144 0.8155131936489108 1.0674898584411108 0.9237900649027148 0.936104465330688 0.9199304132099476 1.0909282917040362 1.0 12.498603426926742 -5.836119767312244 3.0787237427344074 0.9529654525597823 1.022779564128691 0.07870716100097463 0.07110437440959107 0.33884674980363316 6.331710120363364 0.008087869883593066 0.032324462016959404 1.458412012074886e-06 5.836119767312244 0.06981411156890871 GRNS(ph)ATSADEQPHIGNYR ddPTM_A549_MK2206_60min_R1 2 GRNSATSADEQPHIGNYR 18 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;F5H6N2;F5H4F6;F5H4J8;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 GRNS(0.993)AT(0.006)S(0.002)ADEQPHIGNYR;GRNS(0.992)AT(0.006)S(0.002)ADEQPHIGNYR 104.52 1.6145000000000002e-09 19413300.0 2135.61 2541.8 2037.75 2409.7 3714.2 2332.3 2451.0 2418.5 3568.5 3695.2999999999997 3835.3 True False 2496.0487573484515 2671.1667630944044 2326.7335914171067 3000.076608175543 3167.8461001709898 2579.1024379445585 2896.3149737421163 2761.329781345618 2760.240447723532 2860.5291635026892 2882.8891611049 0.8658150271694153 0.926558953126956 0.8070839568890535 1.0406493071782648 1.0988442229797266 0.8946242098867542 1.0046570686165648 0.9578341819729577 0.9574563201956882 0.9922438927226599 1.0 11.493299655036967 -6.2645621866616175 24.999880617844713 0.9853571502535732 0.8724932765787595 0.5064972965522536 0.05525592145881605 179.00915327263667 1433079.122457426 0.007520959462052434 0.018193010838244966 5.437982596289727e-07 6.2645621866616175 -0.11286387367481365 GRPARPS(ph)PSPTGGR ddPTM_A549_MK2206_60min_R1 2 GRPARPSPSPTGGR 14 2 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 GRPARPS(0.837)PS(0.16)PT(0.003)GGR;GRPARPS(0.946)PS(0.053)PT(0.001)GGR 52.172 0.0073485 14526800.0 1275.69 952.03 934.62 1098.06 1637.73 1293.2600000000002 959.44 1256.75 1747.29 2118.8900000000003 1822.68 True False 1490.995284373947 1000.4842605510917 1067.1631697756138 1367.0847492937862 1396.822086487813 1430.1119148034911 1133.757828807482 1434.898161135458 1351.5316048487728 1640.2312773669848 1370.0582525911082 1.0882714523664363 0.7302494318463733 0.7789180991080874 0.9978296519204943 1.0195348145570367 1.0438329261539114 0.8275252724935414 1.047326388072713 0.9864774744378225 1.1971982025325674 1.0 10.420021520138144 -6.280369540141954 23.985058794780393 0.9911243121240182 0.8522566414738251 0.22216487991357825 0.11758469025834192 415.23313459488884 526112.003402931 0.012730547115877308 0.02963534570693792 5.243610927632206e-07 6.280369540141954 -0.13886767065019312 GRPARPS(ph)PSPTGGR ddPTM_A549_PD325901_60min_R1 2 GRPARPSPSPTGGR 14 2 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 GRPARPS(0.9)PS(0.099)PT(0.001)GGR;GRPARPS(0.903)PS(0.097)PT(0.001)GGR 55.864 0.0049768 24425000.0 2021.4 1669.63 2244.8 1942.87 2512.6 1792.79 1917.61 2248.3999999999996 1977.6399999999999 2184.64 2739.2 True False 2226.611039923971 1810.3355796669953 2397.145627078994 2062.8766673220834 2336.123643999433 1778.1901126376297 1990.5856979064567 2203.5538981643217 1894.5266682283527 2046.701457567006 2402.295765219456 0.926867986931894 0.7535856349901264 0.9978561598388401 0.8587105289816944 0.9724546318658737 0.7402044903805537 0.8286180772268945 0.9172700256427507 0.7886317312203573 0.8519772990483686 1.0 11.23019806799006 -11.001247257997191 1.2731511340480557 1.0001916112548095 0.8572592895985687 0.0 0.09116929036243453 0.44687726160530516 1.2864780187006157 0.05522806116632634 0.012510088907036946 9.971322023390522e-12 11.001247257997191 -0.1429323216562408 GRPGS(ph)PLAAEETPGR ddPTM_A549_MK2206_60min_R1 2 GRPGSPLAAEETPGR 15 1 I3L4Y1 I3L4Y1 ABR 1 GRPGS(1)PLAAEETPGR;GRPGS(1)PLAAEETPGR 139.11 1.0699999999999999e-10 29027000.0 2444.45 2254.8599999999997 1948.54 2166.93 3029.7 2692.3999999999996 2176.15 2223.6499999999996 3541.7 3289.8999999999996 3185.8 True False 2857.013398935395 2369.622742714238 2224.8722719763905 2697.8279472771824 2584.0351434193203 2977.3079809295236 2571.5282864581427 2538.8591971425185 2739.5106049327246 2546.709305065217 2394.6779363929772 1.1930679092650003 0.9895371342851728 0.9290903959000185 1.126593228374096 1.0790741853627155 1.2433020472949872 1.0738514133268164 1.060209040455234 1.143999601490945 1.0634871881357204 1.0 11.22561592358291 -5.229503172129582 22.618772723645318 1.0720169643829263 1.1930686909034036 0.16185521742440334 0.07987568529504692 5539.422409145804 3923050.058801433 0.011820897827369763 1.8414206638112889 5.895176711547532e-06 5.229503172129582 0.12105172652047735 GRPGS(ph)PLAAEETPGR ddPTM_A549_PD325901_60min_R1 2 GRPGSPLAAEETPGR 15 1 I3L4Y1 I3L4Y1 ABR 1 GRPGS(1)PLAAEETPGR;GRPGS(1)PLAAEETPGR 134.52 4.465e-10 29727000.0 4109.8 4100.7 4030.3 4343.6 4739.0 4761.8 4443.1 4402.3 4501.1 4609.6 5346.6 True False 4527.0238705251495 4446.280380407903 4303.820394162719 4611.894306968666 4406.148988662464 4723.0214795697575 4612.18460185761 4314.4926729624585 4311.934419996886 4318.549069320743 4689.002094889872 0.965455715078215 0.9482359552053752 0.917854227203923 0.9835556081313679 0.9396773342166632 1.007255143843284 0.9836175178688918 0.9201302506698477 0.9195846648684763 0.9209953380117162 1.0 12.19506520826903 -7.251479893529545 0.003676215168602142 1.9062789226856003 4.3498332516934014e-08 0.0 0.03399439579364803 38046.0439720485 46.783496311967724 11989.519796576298 12269.377001030001 5.604283628365563e-08 7.251479893529545 -1.9062788791872678 GRPIT(ph)MFIPSDVDNYDDIR ddPTM_A549_MK2206_60min_R1 1 GRPITMFIPSDVDNYDDIR 19 1 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 GRPIT(0.994)MFIPS(0.006)DVDNYDDIR 43.523 0.023434 1158000.0 314.41 411.98 345.6 330.45 569.62 363.7 359.43 458.21 479.43 571.65 423.91 True False 367.47472141351943 432.9480222911454 394.6112767482531 411.4102648344643 485.8296525710515 402.18649259547897 424.73377846272103 523.1626707092726 370.83987049238976 442.51386797183255 318.64144767918475 1.153254619228008 1.3587310296400832 1.238417913370631 1.2911385754457192 1.524690702071488 1.2621913926289 1.3329520737376024 1.6418537968607407 1.1638155462617643 1.3887517496385633 1.0 8.315790129180336 -8.971919911673155 9.776724471257001 1.0719463820573625 1.3507882262530926 0.09810930585919586 0.16067161779798905 0.1856606642819941 60.586682132719396 0.02320901541817694 0.024170821267717336 1.0667928305580237e-09 8.971919911673155 0.2788418441957301 GRPLAEES(ph)EQER ddPTM_A549_MK2206_60min_R1 1 GRPLAEESEQER 12 1 Q8N357 Q8N357 SLC35F6 Solute carrier family 35 member F6 1 GRPLAEES(1)EQER 68.48100000000001 0.0011621 2767700.0 386.27 402.45 366.39 235.07 402.52 274.51 243.7 279.7 494.15 502.15 661.88 True False 451.4629326051977 422.93298599706606 418.34961136514 292.66216055269336 343.3098412150197 303.5584659950096 287.9771354961051 319.34833154532555 382.22581399539956 388.7139662416787 497.51692904130294 0.9074323028065605 0.8500876277959879 0.840875127950489 0.5882456323981633 0.6900465515345684 0.6101470086253261 0.5788288170435257 0.641884351876625 0.7682669506984111 0.7813080189868441 1.0 8.958601806945385 -10.09023899853215 0.8621320985616905 0.9813251384562145 0.7134056037974438 0.16322768471716254 0.12247140507525944 0.3756140639451115 0.5577106857410358 0.05254864224870268 0.023469440700628397 8.12383326838318e-11 10.09023899853215 -0.2679195346587707 GRPLAEES(ph)EQER ddPTM_A549_PD325901_60min_R1 2 GRPLAEESEQER 12 1 Q8N357 Q8N357 SLC35F6 Solute carrier family 35 member F6 1 GRPLAEES(1)EQER;GRPLAEES(1)EQER 63.681000000000004 0.0019187000000000002 8404100.0 1488.21 1279.22 1022.8799999999999 1229.04 1590.9 1175.46 1218.1599999999999 1398.1 1422.38 1636.37 1493.1599999999999 True False 1639.2919836377016 1387.0243588229812 1092.2987878771203 1304.95500944764 1479.1606723070518 1165.8874434825204 1264.517745402729 1370.2137987117674 1362.6023150596895 1533.0493189353483 1309.5107859211012 1.251835419197891 1.059192771632925 0.8341273700230003 0.9965210088206667 1.129552110765258 0.8903229022756334 0.9656413364425063 1.0463554889683235 1.0405430254636996 1.1707038501840301 1.0 10.354812227306534 -5.308492314785003 4.071582177058513 1.0043736674073211 1.2631772297106596 0.36973038952215553 0.09080734319864564 0.1281527847432705 4.078263737044315 0.009991891055689768 0.08644602091480566 4.914820773210808e-06 5.308492314785003 0.25880356230333845 GRPPAEKLS(ph)PNPPK ddPTM_A549_MK2206_60min_R1 4 GRPPAEKLSPNPPK 14 2 A0A0U1RRJ4;A0A0U1RRD6;F6VDE0;A0A0U1RQZ9;B1ALF6;B4DNT1;A0A1W2PS06;A0A0U1RRG6;A0A0U1RR26;B1ALG2;F6T8Q0;A0A0U1RQX3;A0A0U1RR83;B1ALG1;A0A0U1RRN2;A0A0U1RQW7;F6XE55;A0A0U1RR09;A0A0U1RQU0;F6UH26;A0A0A0MSS5;A0A0U1RRF8;P51531-2;P51531 A0A0U1RRJ4 SMARCA2 Probable global transcription activator SNF2L2 1 GRPPAEKLS(1)PNPPK;GRPPAEKLS(1)PNPPK;GRPPAEKLS(1)PNPPK;GRPPAEKLS(1)PNPPK 99.055 7.4736e-06 157785900.0 12641.37 13335.2 12230.48 12080.57 18005.5 13952.6 13301.4 14057.300000000001 19928.499999999996 17925.7 18757.7 True False 14774.924204176792 14013.904720755572 13964.945972349451 15040.310192317398 15356.914801741626 15429.05487101369 15718.092203889595 16049.965323675728 15414.726569275152 13876.271920060664 14099.645403816487 1.0478933179537637 0.9939189475617801 0.9904466085770799 1.0667154925929054 1.089170284919706 1.094286730561136 1.1147863477215554 1.138324040357166 1.093270513391968 0.9841575105360196 1.0 13.783371259862292 -6.272880229578434 23.415193546567025 1.0647372407496893 1.0090695575716744 0.25443654526493253 0.04570237840142821 396.31490056772446 811112.2683530471 0.007398147272066727 0.01736329641110605 5.334819997150361e-07 6.272880229578434 -0.05566768317801496 GRPPAEKLS(ph)PNPPK ddPTM_A549_PD325901_60min_R1 4 GRPPAEKLSPNPPK 14 2 A0A0U1RRJ4;A0A0U1RRD6;F6VDE0;A0A0U1RQZ9;B1ALF6;B4DNT1;A0A1W2PS06;A0A0U1RRG6;A0A0U1RR26;B1ALG2;F6T8Q0;A0A0U1RQX3;A0A0U1RR83;B1ALG1;A0A0U1RRN2;A0A0U1RQW7;F6XE55;A0A0U1RR09;A0A0U1RQU0;F6UH26;A0A0A0MSS5;A0A0U1RRF8;P51531-2;P51531 A0A0U1RRJ4 SMARCA2 Probable global transcription activator SNF2L2 1 GRPPAEKLS(1)PNPPK;GRPPAEKLS(1)PNPPK;GRPPAEKLS(1)PNPPK;GRPPAEKLS(1)PNPPK 97.579 8.6173e-06 247933000.0 21045.0 21249.7 21209.0 20933.2 26226.3 24084.0 23576.1 25070.199999999997 26946.8 25230.199999999997 25115.3 True False 23181.472907489846 23040.486794828626 22648.370280077666 22226.19622125343 24384.255163823254 23887.867889024747 24473.301386836956 24570.15519380856 25814.31970602121 23637.160866187132 22026.277319004155 1.052446247350613 1.046045432967895 1.0282432184097117 1.0090763817849868 1.1070529445656552 1.0845168043178328 1.1110956714288494 1.1154928650884441 1.1719783298900333 1.0731346256951517 1.0 14.426938064000918 -6.766455025341626 24.99845880525577 1.0896382727892686 1.0344087481513042 0.34281240815687675 0.04009779735035283 186.7135763434549 930603.7008095175 0.009057156362157863 0.017512548148968684 1.712162475606211e-07 6.766455025341626 -0.05522952463796438 GRPPLT(ph)PSQR ddPTM_A549_MK2206_60min_R1 1 GRPPLTPSQR 10 1 Q9UMN6;A0A669KBI7;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GRPPLT(0.577)PS(0.423)QR 55.105 0.0070688999999999995 8352700.0 1289.5 1787.1 1847.6 1911.3 2149.7 2078.3 1766.4 1707.1 2739.9 2993.1 2983.9 True False 1507.1360747518636 1878.0557566787365 2109.6174621529854 2379.568585801518 1833.481977690371 2298.224326536114 2087.3320153480518 1949.0866527744904 2119.317024721227 2316.9566312017696 2242.9152785495025 0.671954080997001 0.8373279965765263 0.9405693930255266 1.0609266469219423 0.817454852274263 1.024659445907551 0.9306334640949672 0.8689970019888439 0.9448939266630674 1.033011212398602 1.0 11.131159411316812 -5.415413986226967 2.0423516383892677 0.9610973277965564 0.637534399657188 0.6128611592992026 0.06831635257728333 0.2336267115509474 1.3295091744699787 0.008725852991435617 0.12364975575066041 3.842253490229688e-06 5.415413986226967 -0.3235629281393685 GRPPLT(ph)PSQR ddPTM_A549_PD325901_60min_R1 1 GRPPLTPSQR 10 1 Q9UMN6;A0A669KBI7;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GRPPLT(0.868)PS(0.132)QR 63.766000000000005 0.0025266 13135000.0 2413.9 1984.3 2053.2 2006.7 3121.7 2529.3 2076.9 2862.3 2963.1 2253.8 3264.1 True False 2658.957350980743 2151.523924901456 2192.542498894597 2130.649301453637 2902.442561280358 2508.7022193867415 2155.937566023287 2805.209181069087 2838.571211457817 2111.494683364087 2862.6363928347046 0.9288491397776614 0.7515882667763214 0.7659172168643632 0.7442961693586858 1.0139054224788344 0.876360765085683 0.7531300766732676 0.9799390478269053 0.9915933502986534 0.7376049185461501 1.0 11.48312871798641 -8.357195503249933 6.805808871770546 0.9953257169787559 0.8330515864848861 0.02878844912681 0.1110847955043918 0.16265172400159522 9.964887064207291 0.013024232432742772 0.015757430949378433 4.393437946523325e-09 8.357195503249933 -0.16227413049386985 GRPRPS(ph)PLVK ddPTM_A549_MK2206_60min_R1 2 GRPRPSPLVK 10 2 Q27J81-2;Q27J81 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 GRPRPS(1)PLVK;GRPRPS(1)PLVK 72.29 0.00045362 15119900.0 1908.7399999999998 2467.4 1890.89 1641.1799999999998 2882.1 2255.1000000000004 2198.3 2330.3999999999996 2970.5 2737.0 3289.2 True False 2230.888647787416 2592.9801208824983 2159.046635099837 2043.2691736753707 2458.1469078947853 2493.7331851857716 2597.702654743898 2660.7413365506836 2297.6864929137573 2118.7097990709453 2472.400862698154 0.9023167243813476 1.0487701084413776 0.8732591335304946 0.826431184563466 0.9942347719504461 1.0086281811373976 1.0506802088351486 1.07617715909021 0.929334125213931 0.8569442888637313 1.0 11.271696958220314 GRPRPS(ph)PLVK ddPTM_A549_PD325901_60min_R1 4 GRPRPSPLVK 10 2 Q27J81-2;Q27J81 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 GRPRPS(1)PLVK;GRPRPS(1)PLVK;GRPRPS(1)PLVK;GRPRPS(1)PLVK 77.597 0.00028569999999999995 40849200.0 7148.1 7230.530000000001 7683.1 8362.8 9064.7 8569.7 8186.299999999999 9921.599999999999 10039.9 9088.7 10693.1 True False 7873.769849846905 7839.872138647245 8204.52136823352 8879.351162703184 8428.026743517332 8499.911204474984 8497.834126215243 9723.705904655375 9617.957917692735 8514.83793091275 9377.9164891458 0.8396075886323123 0.8359929572545544 0.8748767786245065 0.946836237343373 0.8987099376788127 0.9063752289021726 0.9061537427903966 1.0368727335021375 1.0255964561877644 0.9079669178935432 1.0 13.195051716500554 -8.174428254455815 4.496592508136527 1.0142520875196972 0.8863690818776754 0.5561974947789289 0.044073310227492224 0.07975110199807968 2.878430705031709 0.005413845409030296 0.007022735257142995 6.692243669274226e-09 8.174428254455815 -0.12788300564202182 GRPS(ph)KTPS(ph)PSQPK ddPTM_A549_PD325901_60min_R1 1 GRPSKTPSPSQPK 13 2 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 GRPS(0.593)KT(0.593)PS(0.788)PS(0.026)QPK 58.246 0.0037544000000000006 13099000.0 3214.5 3113.1 3502.1 2860.5 4017.4 3497.1 3337.4 2955.7 4064.6 3367.8 4006.2 True False 3540.833673610173 3375.4518624253997 3739.773565838087 3037.1865883331498 3735.231683277612 3468.6207770598116 3464.406583295353 2896.7462447982048 3893.778997027249 3155.156533247657 3513.4627973941942 1.0077902849110225 0.9607193976634242 1.0644124561705162 0.864442506858396 1.0631197478589771 0.9872370869082091 0.9860376452156475 0.82447044748748 1.1082454039118106 0.8980190527668943 1.0 11.778677907203047 GRPS(ph)LYVQR ddPTM_A549_MK2206_60min_R1 2 GRPSLYVQR 9 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GRPS(1)LYVQR;GRPS(1)LYVQR 109.72 0.00010909 39907000.0 1669.81 2941.6 1776.5 1685.9 2709.1 1703.74 1973.5 1765.6499999999999 2942.3 2679.51 2531.3999999999996 True False 1951.633105065072 3091.314875410536 2028.4344130302998 2098.945575682928 2310.5949787230693 1884.0286359489182 2332.0594046022316 2015.9362945763457 2275.8737478876114 2074.2068299994853 1902.7835169141767 1.025672698820787 1.6246277350688059 1.066035308272954 1.103092157896593 1.2143236254591154 0.9901434499518506 1.2256041656195495 1.0594669738603126 1.1960760263356132 1.090090812518343 1.0 10.89389571761389 -14.999999860779543 0.03811888977221721 0.21118532593070707 1.665385844600489 0.10137575693678658 0.16206816721555384 886.9904378333198 2.602587787609221 85.77493665830212 28.226845014325264 1.0000003205670013e-15 14.999999860779543 1.454200518669782 GRPS(ph)LYVQR ddPTM_A549_PD325901_60min_R1 4 GRPSLYVQR 9 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GRPS(1)LYVQR;GRPS(1)LYVQR;GRPS(1)LYVQR;GRPS(1)LYVQR 136.53 1.2396e-05 73864100.0 6913.2 7692.5 7741.1 7813.1 7913.400000000001 6791.299999999999 7342.7 7879.9 8920.599999999999 8354.5 9351.0 True False 7615.022974771146 8340.773971831095 8266.45759701586 8295.697442162465 7357.590083747952 6735.993904448337 7622.130466579611 7722.729212838037 8545.69820422213 7826.99544421211 8200.886280872928 0.9285609766997743 1.0170576308666088 1.0079956377758663 1.0115610871852554 0.8971701145165479 0.8213738946921889 0.9294276503207757 0.9416944642739279 1.0420456901290551 0.9544084841741007 1.0 13.001564116822799 -8.752425137991002 24.875027190142152 1.019854909188137 0.9449703370579529 0.12241584869267286 0.05788350043775389 192.2507108478432 530520.3138797728 0.010291617414570851 0.011587700721359187 1.768377017478321e-09 8.752425137991002 -0.07488457213018418 GRPSKT(ph)PS(ph)PSQPK ddPTM_A549_PD325901_60min_R1 1 GRPSKTPSPSQPK 13 2 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 GRPS(0.182)KT(0.807)PS(0.942)PS(0.068)QPK 50.077 0.014336000000000002 17332000.0 3036.5 3058.1 3227.2 3657.0 3744.4 3358.9 3370.3 3251.3 3966.1 3552.5 3610.0 True False 3344.763244646848 3315.816819402883 3446.217198730099 3882.8845843504023 3481.4062614787385 3331.546232039747 3498.5586107989243 3186.450270904492 3799.41860948427 3328.1945437265554 3165.992885675467 1.0564658119669907 1.047322890207775 1.0885107210197809 1.2264350314615398 1.0996254215321706 1.0522911302527955 1.1050431056330388 1.006461601768464 1.2000717457941037 1.0512324771116732 1.0 11.628442298250809 -11.172676571584454 1.5827361609535653 1.0001012635107835 1.111664466377684 0.11749182681481585 0.06440972478034428 0.4345328512809699 1.9574748788907137 0.049911047951085225 0.010585869864790954 6.719290666305442e-12 11.172676571584454 0.11156320286690047 GRPVS(ph)PQSR ddPTM_A549_MK2206_60min_R1 3 GRPVSPQSR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GRPVS(0.996)PQS(0.004)R;GRPVS(0.994)PQS(0.006)R;GRPVS(0.93)PQS(0.07)R 57.348 0.011356999999999999 80106000.0 2343.96 2333.02 2159.38 2089.7400000000002 2856.64 2803.48 2553.35 2426.29 3920.8999999999996 3525.87 3550.2 True False 2739.5631436800154 2451.760752865885 2465.61255435371 2601.7263938119945 2436.4320401681266 3100.1423928005875 3017.260643902259 2770.224037701492 3032.8224103906928 2729.373518176936 2668.587359464608 1.0265967625019579 0.9187485446823729 0.9239392315971922 0.9749451838571146 0.913004414686631 1.1617166594922945 1.1306583736901175 1.038086322291984 1.1364898359554398 1.0227784031490441 1.0 11.381860525144553 -7.246748338842563 24.81443277783241 1.0753530389396397 0.9494075172533775 0.5775944195212295 0.05527632893609169 498.1027832410141 841338.4418825909 0.009454653013065568 0.016329096984898296 5.665675035015552e-08 7.246748338842563 -0.12594552168626227 GRPVS(ph)PQSR ddPTM_A549_PD325901_60min_R1 1 GRPVSPQSR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GRPVS(0.998)PQS(0.002)R 70.41199999999999 0.002964 33538000.0 786.51 910.86 818.26 750.76 1234.6 1086.5 800.2 953.31 809.27 1108.8 1169.1 True False 866.3559162019401 987.6213688634485 873.7920441971037 797.1327401003304 1147.8859551387802 1077.6519042279267 830.6520488862419 934.295484192772 775.2591962122323 1038.7901787710075 1025.3081115355087 0.8449712885861005 0.9632434950547497 0.852223867505063 0.7774567772672145 1.1195522031125824 1.0510517688327146 0.8101487148504575 0.9112338756333104 0.7561231472666285 1.013149283697081 1.0 10.001841798479106 -5.667604355036481 0.003413447390579508 1.7744659246196486 1.8250595467924138e-07 0.0 0.11477439619391316 369738.2724770204 209.62344770831788 53234.40558179175 55758.86683115153 2.149788052546172e-06 5.667604355036481 -1.774465742113694 GRQS(ph)QQEAEEEEREEEEEAQIIQR ddPTM_A549_MK2206_60min_R1 1 GRQSQQEAEEEEREEEEEAQIIQR 24 2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 1 GRQS(1)QQEAEEEEREEEEEAQIIQR 53.843999999999994 0.0011481 5273000.0 0.0 189.38 120.68 0.0 170.32 0.0 0.0 0.0 118.91 0.0 0.0 True False 0.0 199.01863309261873 137.79423865156008 0.0 145.26615362153973 0.0 0.0 0.0 91.97707486025081 0.0 0.0 0.0 GRQS(ph)QQEAEEEEREEEEEAQIIQR ddPTM_A549_PD325901_60min_R1 2 GRQSQQEAEEEEREEEEEAQIIQR 24 2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 1 GRQS(1)QQEAEEEEREEEEEAQIIQR;GRQS(1)QQEAEEEEREEEEEAQIIQR 70.79899999999999 2.4435999999999998e-05 5925000.0 0.0 348.86 140.39 310.9 143.14 0.0 254.51 0.0 0.0 316.99 0.0 True False 0.0 378.25965652427664 149.91770963365101 330.10358689487 133.08634020619232 0.0 264.1955173232158 0.0 0.0 296.9751973021483 0.0 0.0 GRRPLLPFETEVGPCGVGEASLDKADSEGSNSGGT(ph)WPK ddPTM_A549_PD325901_60min_R1 1 GRRPLLPFETEVGPCGVGEASLDKADSEGSNSGGTWPK 38 3 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 GRRPLLPFETEVGPCGVGEAS(0.001)LDKADS(0.02)EGS(0.02)NS(0.115)GGT(0.844)WPK 82.823 1.1571e-06 5383000.0 1165.5 1300.7 1602.3 1491.3 1774.2 2199.9 1840.7 1742.5 1623.0 1986.1 1872.9 True False 1283.8207020042487 1410.3145538070467 1711.04171341263 1583.4142140119648 1649.5863126577217 2181.984743774521 1910.748845769688 1707.7444705351934 1554.7909541345336 1860.697307050054 1642.5451732912968 0.7816045018912668 0.8586153834546227 1.0417014650404295 0.9640004060522447 1.004286724944262 1.3284168857300325 1.163285416340161 1.0396940664427825 0.9465742430809844 1.1328134758824493 1.0 10.68171733276656 -5.635043891800307 3.5536970631065525 1.019501294386622 0.7942675898283355 0.36859353736485045 0.1126647647222708 0.21442799869247062 5.0166319670528265 0.016720727840609573 0.07975084918061058 2.3171604552279372e-06 5.635043891800307 -0.2252337045582865 GRRPS(ph)GPDGAAR ddPTM_A549_MK2206_60min_R1 4 GRRPSGPDGAAR 12 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C528 E7EX82 PHC3 Polyhomeotic-like protein 3 1 GRRPS(1)GPDGAAR;GRRPS(1)GPDGAAR;GRRPS(1)GPDGAAR;GRRPS(1)GPDGAAR 80.488 0.0002674 170426000.0 7132.869999999999 8183.28 7424.36 6684.15 9837.22 5959.24 5736.98 6682.7699999999995 9845.3 9722.15 9813.07 True False 8336.7240740716 8599.773998385072 8477.245887264637 8321.7670500629 8390.177969286531 6589.842821376633 6779.315005328052 7630.073112624791 7615.355269713454 7525.909562673576 7376.213892045898 1.130217235574129 1.165879152129603 1.149267905097767 1.1281894982785996 1.137464028576237 0.8933909615179076 0.9190778771530055 1.0344159245236422 1.0324206132261744 1.0202943776873257 1.0 12.84866477564081 -7.152955068005304 9.257001390979205 1.0016537901728428 1.1437296508103127 0.7535966457586065 0.04458672543776229 0.16663468447834398 13.163166158776692 0.0071652888630333155 0.012425470726249591 7.031450633270274e-08 7.152955068005304 0.1420758606374699 GRRPS(ph)GPDGAAR ddPTM_A549_PD325901_60min_R1 2 GRRPSGPDGAAR 12 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C528 E7EX82 PHC3 Polyhomeotic-like protein 3 1 GRRPS(1)GPDGAAR;GRRPS(1)GPDGAAR 78.244 0.00032965 194242000.0 6254.1 7049.700000000001 6111.799999999999 7196.9 7707.6 7987.9 6946.1 8475.0 7549.6 8404.0 8653.0 True False 6889.011627974918 7643.802959924307 6526.583501239037 7641.4361676542 7166.2447657765015 7922.849190779808 7210.437636551765 8305.959476491122 7232.316566441205 7873.370005764387 7588.735855886371 0.9077943624340679 1.007256426509459 0.8600356667015295 1.0069445442256304 0.9443265521249953 1.0440275351835149 0.9501500346673457 1.094511606969219 0.953033114313934 1.0375074525300856 1.0 12.88964386380231 -6.34819027537419 24.999999961687784 0.9876338247970904 0.933230729301767 0.2508957147528704 0.05525025658931306 90.50375654644215 26079.460215302446 0.006928835483225996 0.016101159262182852 4.4854882631427655e-07 6.34819027537419 -0.054403095495323406 GRRPS(ph)QDDVEAAPEETR ddPTM_A549_MK2206_60min_R1 2 GRRPSQDDVEAAPEETR 17 2 O94761 O94761 RECQL4 ATP-dependent DNA helicase Q4 1 GRRPS(1)QDDVEAAPEETR;GRRPS(1)QDDVEAAPEETR 99.11 2.3008000000000003e-07 41722000.0 1540.92 1426.31 1311.58 1007.1500000000001 1382.01 1253.1 808.65 785.36 1385.27 1807.1100000000001 1284.48 True False 1800.9896241230263 1498.9030867374229 1497.581766080652 1253.9017952126815 1178.7181597375761 1385.7022102595397 955.5712376648565 896.6871850641289 1071.5085568216268 1398.882595907597 965.5081661554553 1.8653282149796453 1.5524499318383664 1.5510814082949227 1.2986962090704806 1.2208267118351768 1.435205064890595 0.9897080844689625 0.9287204567462503 1.1097871508308967 1.448856306910163 1.0 9.915144651148637 -4.039326615338149 0.32587172451632496 1.0157417090037533 3.5022780688554387 0.6323949542095094 0.16878473233449087 3.64467821560251 0.14573821270944365 0.0336156307005901 4.229374429003259 9.134260322670349e-05 4.039326615338149 2.4865363598516854 GRRPS(ph)QDDVEAAPEETR ddPTM_A549_PD325901_60min_R1 2 GRRPSQDDVEAAPEETR 17 2 O94761 O94761 RECQL4 ATP-dependent DNA helicase Q4 1 GRRPS(1)QDDVEAAPEETR;GRRPS(1)QDDVEAAPEETR 69.922 0.00045252 12893600.0 770.49 724.45 798.7 554.91 991.3299999999999 764.97 929.28 999.6400000000001 1138.91 1968.83 2115.4 True False 848.7095775952404 785.501943957496 852.9045849732677 589.185530407952 921.7024007028409 758.7403379449948 964.6442589215275 979.7013959975908 1091.0455733662109 1844.5177377973703 1855.2192106254506 0.4574713180708789 0.4234011482086149 0.45973251036233487 0.3175827023747343 0.49681589939557985 0.4089761110705621 0.5199624138197214 0.5280785097451118 0.5880952326913359 0.994231693609688 1.0 10.857373948811345 -10.238761424343481 0.38426686953588335 1.11109553051258 0.4059788042304865 0.9543338903794704 0.046024953165521694 0.24225586865380186 0.05880051934301901 0.06872242242840271 0.015822195718279905 5.7708339175683285e-11 10.238761424343481 -0.7051167262820935 GRRS(ph)PILLPK ddPTM_A549_MK2206_60min_R1 5 GRRSPILLPK 10 2 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 GRRS(1)PILLPK;GRRS(1)PILLPK;GRRS(1)PILLPK;GRRS(1)PILLPK;GRRS(1)PILLPK 67.456 0.0015017000000000001 289939000.0 7895.79 8717.2 8195.18 7316.700000000001 10534.6 8309.8 8081.0 7351.299999999999 12000.7 11531.8 12755.5 True False 9228.406318468407 9160.868245828364 9357.379753998115 9109.291828459149 8984.974295100234 9189.137520401182 9549.213097841717 8393.369287412048 9282.56061117998 8926.758370817075 9587.957316109183 0.962499729005189 0.955455676720291 0.9759513361909045 0.9500763852123324 0.9371103769938725 0.958404091449393 0.9959590748070635 0.8754074523579646 0.9681478864725346 0.9310386014984448 1.0 13.227007771040176 -9.743392002119341 1.2862643536618295 0.9935803308270322 0.9532062062217356 0.0 0.034374157172133574 0.37498970102182994 1.2575264060092586 0.007620925252539151 0.005247267606747757 1.8055436736371285e-10 9.743392002119341 -0.04037412460529666 GRRS(ph)PILLPK ddPTM_A549_PD325901_60min_R1 4 GRRSPILLPK 10 2 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 GRRS(1)PILLPK;GRRS(1)PILLPK;GRRS(1)PILLPK;GRRS(1)PILLPK 81.431 0.00036723 793830000.0 16344.0 16568.600000000002 18336.600000000002 17406.600000000002 17872.399999999998 19584.0 19369.2 20942.8 20122.5 18647.1 20777.3 True False 18003.23084818313 17964.894069506765 19581.031942933307 18481.766148743143 16617.104280432806 19424.5143970545 20106.305505232936 20525.079424691234 19276.821302878703 17469.718923666005 18221.823818156474 0.9880037820497676 0.9858998884407114 1.074592320633816 1.0142654397924569 0.9119341974909941 1.066002755316932 1.1034189390635387 1.1264009371136474 1.0578974692791736 0.9587250484915203 1.0 14.153379744931271 GRRT(ph)PPVQPPPTR ddPTM_A549_MK2206_60min_R1 2 GRRTPPVQPPPTR 13 2 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 GRRT(1)PPVQPPPTR;GRRT(1)PPVQPPPTR 67.605 0.0014815999999999998 29757000.0 947.4200000000001 826.45 604.01 558.13 975.01 674.74 586.97 733.05 1104.06 1219.79 1038.48 True False 1107.321333804894 868.5127749466405 689.6677004303016 694.8718750554079 831.5873205879368 746.1405389438372 693.6148511372542 836.9620823714724 853.9921728215331 944.2385918190527 780.5967554100627 1.4185574384346455 1.1126266781500955 0.8835134090046348 0.8901803270888287 1.065322543072944 0.9558591344027239 0.8885699899852707 1.0722079954480466 1.0940247533733527 1.2096368390911716 1.0 9.608433655929067 -5.315725394280619 3.4180004259966887 1.0135399045793836 1.4481232605349519 0.5990213148262731 0.0970608516801653 0.11948369509402393 2.327995646029224 0.011732736516544199 0.1227795907463338 4.833643381723516e-06 5.315725394280619 0.4345833559555683 GRRT(ph)PPVQPPPTR ddPTM_A549_PD325901_60min_R1 4 GRRTPPVQPPPTR 13 2 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 GRRT(1)PPVQPPPTR;GRRT(1)PPVQPPPTR;GRRT(1)PPVQPPPTR;GRRT(1)PPVQPPPTR 73.168 0.00045755 80674000.0 11016.6 10730.800000000001 9500.8 10400.0 11533.7 11452.900000000001 9424.3 11496.8 10893.9 11995.7 11907.900000000001 True False 12134.997122007726 11635.122175745884 10145.581420951574 11042.384379886287 10723.612701104941 11359.631379596894 9782.946893674834 11267.487304934883 10436.067267557728 11238.289454801034 10443.30379039748 1.1619883291306474 1.114122734459211 0.9714915533033082 1.0573650447705694 1.0268410185448404 1.0877430751408352 0.9367674339484563 1.078919806517094 0.9993070657538081 1.0761239623359933 1.0 13.35029056732047 -2.0000000000190123 0.602445457458588 1.0069204449376288 11.525614485969117 0.350463717708941 0.051030697953412175 85.70661834449149 0.6018041304514022 0.007170622904001932 1191.4370283765343 0.009999999999562225 2.0000000000190123 10.518694041031488 GRRT(ph)PPVQPPPTREDR ddPTM_A549_MK2206_60min_R1 1 GRRTPPVQPPPTREDR 16 3 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 GRRT(1)PPVQPPPTREDR 66.12 0.0011607000000000002 8669500.0 598.59 983.32 790.57 669.56 901.74 432.31 595.12 718.1 834.91 917.65 1095.4 True False 699.61735787958 1033.3667879006964 902.6847137119978 833.6022300576906 769.0952405277552 478.056757255847 703.2456006419458 819.8928740890175 645.8042180773018 710.3522276643959 823.3819484979804 0.8496875103417404 1.2550272565311542 1.096313461035528 1.0124125645192419 0.9340686201959426 0.5806014549237104 0.8540940227373356 0.9957625080130459 0.784331280586589 0.8627250439000099 1.0 9.68541800970192 -6.696782757304991 3.072805685294647 0.8769132492931098 1.0807828831438935 0.31289764016694754 0.13901241904989278 0.25651417594891013 4.900763245111027 0.02129227883822078 0.04649748771916628 2.010098051995088e-07 6.696782757304991 0.20386963385078372 GRRT(ph)PPVQPPPTREDR ddPTM_A549_PD325901_60min_R1 2 GRRTPPVQPPPTREDR 16 3 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 GRRT(1)PPVQPPPTREDR;GRRT(1)PPVQPPPTREDR 68.168 0.00090628 29767000.0 3182.4 3169.2 2989.2 3091.1 3222.3 3619.4 2988.2 3203.7 3381.2 3710.5 4477.0 True False 3505.4749052409443 3436.279606308366 3192.0650875198367 3282.0302266025496 2995.9767643315204 3589.9248064082462 3101.917586205783 3139.7996902459704 3239.0999224397297 3476.2183967621095 3926.3573820412894 0.8928058666474393 0.8751825857792561 0.8129838363975674 0.8358969668971503 0.7630422992147318 0.9143143267671335 0.7900242602452849 0.7996724151008403 0.8249630910459153 0.8853545560223162 1.0 11.938975779379819 -10.612312353628802 0.8246980663377973 1.0035212469816055 0.8328009501270884 0.3009024207670853 0.0541060456172514 0.3007289401160119 0.35400808411094253 0.03194247309838243 0.00805030378825506 2.4416738184097503e-11 10.612312353628802 -0.17072029685451706 GRS(ph)FAGNLNTYK ddPTM_A549_MK2206_60min_R1 8 GRSFAGNLNTYK 12 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK 166.79 5.5037e-15 1347804200.0 46878.2 53332.700000000004 49019.0 44617.200000000004 67262.3 51242.899999999994 50379.0 50244.7 75145.20000000001 67501.2 72516.20000000001 True False 54790.09409804796 56047.10662762015 55970.63129317885 55548.416002942235 57368.10477182997 56665.389665715884 59532.212183661395 57367.0400929403 58124.93218222618 52252.63203838055 54508.426194695334 1.0051674194801836 1.0282283041419853 1.0268253039128437 1.0190794319493324 1.0524630552883754 1.039571193329197 1.0921653098370865 1.0524435229157865 1.0663476500791504 0.9586156799270364 1.0 15.734191645946357 -5.445064078922789 0.9424329120143747 1.0393864632725147 0.9978378472058572 0.05127708035427536 0.0335098593498485 3.1850794836041514 2.5647703524907177 0.004686497715307245 0.12558819308618185 3.588689806351435e-06 5.445064078922789 -0.041548616066657496 GRS(ph)FAGNLNTYK ddPTM_A549_PD325901_60min_R1 4 GRSFAGNLNTYK 12 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK;GRS(1)FAGNLNTYK 197.17 1.4982000000000002e-24 2619378000.0 35581.7 37361.1 37760.9 36752.8 43693.600000000006 38233.0 40212.1 39960.3 41746.100000000006 38730.5 39437.6 True False 39193.927990136894 40509.65101579187 40323.58174873803 39022.93698433507 40624.71227073696 37921.64312411073 41742.39347040544 39163.26046825108 39991.6565929733 36285.04962021153 34587.025215544265 1.133197427239917 1.1712383693982975 1.1658586275472922 1.1282536367654192 1.1745650866926598 1.096412394179185 1.2068801294783045 1.1323107501783687 1.1562618162084681 1.0490942598874948 1.0 15.077943314297043 -10.67172629181357 0.6702146280942959 0.9852015443782572 1.1540896998320689 0.7042945738788255 0.031170248588018926 0.2795934701781455 0.19314037908795592 0.027130632069539144 0.005196393765372793 2.1294806993872557e-11 10.67172629181357 0.16888815545381164 GRS(ph)FAGNLNTYKR ddPTM_A549_MK2206_60min_R1 3 GRSFAGNLNTYKR 13 2 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 GRS(1)FAGNLNTYKR;GRS(1)FAGNLNTYKR;GRS(0.999)FAGNLNT(0.001)YKR 131.45 7.9222e-09 122789000.0 7943.8 8797.3 10057.0 8868.5 15151.400000000001 10331.8 9580.2 8016.200000000001 16579.3 16808.3 18803.5 True False 9284.519232736602 9245.044993693602 11483.23382597563 11041.282898122094 12922.649130938215 11425.104218306213 11320.798331882597 9152.520898582903 12824.11502170176 13011.293356128666 14134.071999800793 0.6568891988711717 0.6540963562251488 0.8124504973610914 0.7811820187613103 0.9142905972971093 0.8083377683704482 0.800958020593227 0.6475501821917915 0.9073192086387069 0.9205622665790898 1.0 13.786889542857494 -8.491339394764505 0.04578003736693628 1.7032696444970559 3.157072676116632e-12 0.4446024376170803 0.08518750083197713 21.99041943549406 0.8077850453786236 14.646482416576571 15.029534579164773 3.225972086528505e-09 8.491339394764505 -1.7032696444938988 GRS(ph)FAGNLNTYKR ddPTM_A549_PD325901_60min_R1 4 GRSFAGNLNTYKR 13 2 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 GRS(1)FAGNLNTYKR;GRS(1)FAGNLNTYKR;GRS(0.999)FAGNLNT(0.001)YKR;GRS(1)FAGNLNTYKR 180.32 1.3047999999999998e-23 209601800.0 12757.7 12321.57 14513.3 15213.8 14831.8 22221.9 17615.4 19885.1 21658.0 14869.800000000001 21016.3 True False 14052.852312277639 13359.951946453675 15498.259813562703 16153.521872953273 13790.06553493225 22040.932214047465 18285.76368651675 19488.47608094084 20747.789577723786 13930.918290304055 18431.428333302305 0.7624396795600827 0.7248462628539006 0.8408604874946187 0.8764118320535549 0.748182142238866 1.195834192308549 0.9920969420192811 1.0573502893277478 1.1256745382145035 0.7558241303053745 1.0 14.169880255701226 -7.249918286879044 24.9960021463109 1.0634881919776957 0.794463311283749 0.48565526150070193 0.11365305703192677 263.0367637755693 570680.8864738038 0.010498552574894824 0.018083705661939484 5.6244714046028935e-08 7.249918286879044 -0.2690248806939467 GRS(ph)GGQVRDEYR ddPTM_A549_MK2206_60min_R1 3 GRSGGQVRDEYR 12 2 C9JQX9;B3KSB0;P52298-3;P52298-2;P52298 C9JQX9 NCBP2 Nuclear cap-binding protein subunit 2 1 GRS(0.99)GGQVRDEY(0.01)R;GRS(1)GGQVRDEYR;GRS(0.986)GGQVRDEY(0.014)R 63.29 0.0023316 25455900.0 1204.4099999999999 1141.17 1338.8600000000001 1076.79 1896.98 1142.31 1250.01 802.9 2072.18 1970.96 2230.1 True False 1407.68496300263 1199.2506786688346 1528.730480286939 1340.6035983389406 1617.9367549142114 1263.18848599599 1477.12063660848 916.7135337781253 1602.8345385914931 1525.7187671088307 1676.3046223711399 0.8397548656827383 0.7154133339872853 0.9119646035006115 0.7997374584833222 0.9651806320414682 0.7535554511620952 0.8811767365522662 0.5468657197171182 0.9561714005920219 0.9101679651462722 1.0 10.711068627762781 -8.968413941584654 24.99104325813538 0.9806640552374497 0.8053440933289687 0.28342760292020397 0.10736769013482306 131.8698514301482 104336.83810736258 0.017108814714737478 0.01806261356393251 1.0754396849926525e-09 8.968413941584654 -0.17531996190848098 GRS(ph)GGQVRDEYR ddPTM_A549_PD325901_60min_R1 4 GRSGGQVRDEYR 12 2 C9JQX9;B3KSB0;P52298-3;P52298-2;P52298 C9JQX9 NCBP2 Nuclear cap-binding protein subunit 2 1 GRS(1)GGQVRDEYR;GRS(1)GGQVRDEYR;GRS(1)GGQVRDEYR;GRS(1)GGQVRDEYR 73.834 0.00045203 43732900.0 3512.09 3160.87 3615.17 3699.7900000000004 3456.4599999999996 3690.89 3380.9100000000003 3601.53 3819.58 3695.9300000000003 4438.07 True False 3868.634791335992 3427.247607974231 3860.517175983234 3928.3176254672585 3213.690173739662 3660.83261555068 3509.5723801549425 3529.6946588043734 3659.056335547246 3462.5683490486394 3892.2155252436874 0.993941565220436 0.8805390106858625 0.9918559624833548 1.0092754627767717 0.8256711769676363 0.9405523902280513 0.9016901446985549 0.9068600225018071 0.9400960228989776 0.8896137242635996 1.0 11.926375883936114 -10.224961805284549 0.8567528329785975 0.9965845029226477 0.9306735045223224 0.0 0.06046318448642865 0.6792416021111307 0.9721909189790451 0.02452481314710204 0.00968679108917033 5.957145322824884e-11 10.224961805284549 -0.06591099840032522 GRS(ph)IDQDYER ddPTM_A549_MK2206_60min_R1 2 GRSIDQDYER 10 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GRS(1)IDQDYER;GRS(1)IDQDYER 137.81 1.0372999999999999e-07 96042000.0 2090.6 2049.01 1828.96 1547.92 2286.09 1315.58 1705.97 1567.44 2338.9 2597.8 2809.3 True False 2443.4421697372973 2153.295856970678 2088.3340298654066 1927.1604694887694 1949.809189365112 1454.7938023886736 2015.9226665666422 1789.6294200836778 1809.1428844558127 2010.9551757495442 2111.6732772643577 1.15711184871494 1.0197107100584433 0.9889475101805585 0.9126224640136461 0.923347948926579 0.6889293992834621 0.9546565220440925 0.8474935205895663 0.8567342798406443 0.9523041264956991 1.0 11.044170919673983 -5.387515061859005 1.1736418206057653 0.9075663180471076 1.2323638253807438 0.5061241463137532 0.07907682589180888 0.9427421825874682 1.2325148388534068 0.012942724405249753 0.35181492657254504 4.0971790005377825e-06 5.387515061859005 0.3247975073336362 GRS(ph)IDQDYER ddPTM_A549_PD325901_60min_R1 2 GRSIDQDYER 10 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GRS(1)IDQDYER;GRS(1)IDQDYER 154.13 4.9683999999999995e-09 130194000.0 3292.1000000000004 3717.1000000000004 3598.5 4031.0 4563.9 3654.9 3570.2 3565.7 3867.9 3779.2 4057.7999999999997 True False 3626.3115684840723 4030.353062163583 3842.715849538381 4279.985714934774 4243.34740860026 3625.135706178233 3706.0659146884013 3494.579316262464 3705.3456139845725 3540.580667037694 3558.716324513545 1.018994277095061 1.1325300177486073 1.0798039234171488 1.202676843178789 1.1923814717601298 1.0186638595515947 1.0414052643532914 0.9819774878347889 1.041202859711239 0.9949038766167096 1.0 11.797141220732986 -7.286598500835603 23.778139104792437 1.0185661152493182 1.1274539050951182 0.5565907651707362 0.04973680577481273 241.854899004678 228579.03694373483 0.00735859932687569 0.011766967008968694 5.168940097228116e-08 7.286598500835603 0.10888778984580005 GRS(ph)KDRDPNR ddPTM_A549_MK2206_60min_R1 2 GRSKDRDPNR 10 3 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 GRS(1)KDRDPNR;GRS(1)KDRDPNR 53.967 0.0059281 315800000.0 2286.4700000000003 1412.1 1167.43 904.56 792.26 612.39 550.57 516.054 914.13 2606.07 2821.3999999999996 True False 2672.370237175566 1483.9698584332389 1332.9891285133483 1126.1772406072407 675.7196035004761 677.1927033284177 650.6014423064863 589.2062348490932 707.0810145656471 2017.3569770057788 2120.768513321347 1.2600952062374562 0.6997321249876468 0.6285406069263763 0.5310231802920953 0.3186201602183483 0.3193147668284939 0.30677626446253475 0.277826755323868 0.33340791799020236 0.9512386497319243 1.0 11.050371440698324 -5.147901583072929 1.897660738072914 0.5639510725185309 1.6285398787866678 0.42279232940120803 0.24600910196631878 1.1422808697295914 3.305124526744715 0.04377020611415279 2.350214677838656 7.1137470239270515e-06 5.147901583072929 1.0645888062681368 GRS(ph)KDRDPNR ddPTM_A549_PD325901_60min_R1 1 GRSKDRDPNR 10 3 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 GRS(1)KDRDPNR 50.675 0.024769 10358000.0 616.98 576.56 488.1 333.38 392.76 194.42 339.3 432.87 358.5 519.3 655.57 True False 679.6153554033297 625.1487346374959 521.2254011837388 353.9721254390856 365.17389254844284 192.83670797974548 352.2122471720841 424.23606827005443 343.433491717332 486.5113093757076 574.9390460006275 1.1820650556451995 1.0873304552650151 0.9065750618425903 0.615668961607974 0.6351523610870643 0.3354037429204887 0.6126079792669008 0.7378800782815356 0.5973389598537672 0.8461963276976262 1.0 9.167265202016141 -3.1113197508961723 13.070799888369523 0.7797172206738472 0.8993112839082864 0.0 0.24002074537540105 0.0 0.0 0.035168138817451566 0.0 0.0007738918073339546 3.1113197508961723 0.11959406323443922 GRS(ph)MNSTGSGK ddPTM_A549_PD325901_60min_R1 2 GRSMNSTGSGK 11 1 E9PHV5;P28290-3;P28290 E9PHV5 SSFA2 Sperm-specific antigen 2 1 GRS(1)MNSTGSGK;GRS(0.991)MNS(0.008)T(0.001)GSGK 56.599 0.004139100000000001 7169200.0 3112.2 3176.7 2523.0 3390.9 3459.2 3530.0 3064.8999999999996 3119.5 3714.1 3513.7 3908.9 True False 3428.1482529194523 3444.411657629619 2694.225952031494 3600.348191707347 3216.237725592151 3501.2528503677695 3181.5364466776346 3057.279125299592 3558.009293130666 3291.844382348205 3428.1300805586766 1.0000053009542662 1.0047494046866183 0.7859170710326199 1.0502367492194473 0.938190106563286 1.021330220292334 0.9280675971779767 0.8918212125723516 1.0378863139729 0.9602448871519305 1.0 11.743206138282968 -8.787457888740644 24.982797721903285 1.0178907647540918 0.9529814467788099 0.06333513542352698 0.07106644770445632 287.0348133145478 275607.545853612 0.011363194568617915 0.012098876281584415 1.6313310831828308e-09 8.787457888740644 -0.06490931797528188 GRS(ph)PDELPSAGGDGGK ddPTM_A549_MK2206_60min_R1 1 GRSPDELPSAGGDGGK 16 1 A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;A0A2R8Y5N1;B4E2I7 A0A140T8Z0 DIAPH1 Protein diaphanous homolog 1 1 GRS(0.999)PDELPS(0.001)AGGDGGK 78.94 9.8168e-05 13777000.0 4731.7 4676.8 4209.3 3395.4 5705.4 4745.5 4014.6 4114.1 6469.1 6230.7 6401.4 True False 5530.295281041796 4914.829143772093 4806.242034769741 4227.273152425299 4866.143217897681 5247.665660192041 4744.000854175891 4697.286273902834 5003.859179029925 4823.180542590913 4811.755710347794 1.1493300188014046 1.0214211692423696 0.9988541239601595 0.8785302926610443 1.0113030483723282 1.0905927017256534 0.9859188910970283 0.9762104638440413 1.0399237783973547 1.0023743583279903 1.0 12.232347684363091 GRS(ph)PDELPSAGGDGGK ddPTM_A549_PD325901_60min_R1 2 GRSPDELPSAGGDGGK 16 1 A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;A0A2R8Y5N1;B4E2I7 A0A140T8Z0 DIAPH1 Protein diaphanous homolog 1 1 GRS(1)PDELPSAGGDGGK;GRS(1)PDELPSAGGDGGK 90.912 2.8092e-06 55462000.0 10253.0 9885.7 10647.0 10749.0 11392.8 11524.3 11536.1 11845.6 13759.099999999999 12428.4 13984.0 True False 11293.877012140327 10718.80263286717 11369.569445612104 11412.94131724978 10592.60903102632 11430.449921669484 11975.11259829614 11609.330215306574 13180.852875559125 11643.668702955993 12264.056651879704 0.9208924365502928 0.874001395877791 0.9270643285775672 0.9306008314549433 0.8637116846164273 0.9320284670992242 0.9764397652599495 0.9466142031826981 1.074754728366238 0.9494141321641216 1.0 13.582148645976874 -8.18214685974088 1.3839583124119443 1.0337386140213045 0.9056943781892752 0.44396810030049094 0.041333727511944134 0.16573712525266251 0.6217563831429708 0.006819017077116404 0.009158346042581094 6.5743548331856834e-09 8.18214685974088 -0.12804423583202929 GRS(ph)PKGEFKDEEETVTTK ddPTM_A549_MK2206_60min_R1 3 GRSPKGEFKDEEETVTTK 18 3 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 GRS(1)PKGEFKDEEETVTTK;GRS(1)PKGEFKDEEETVTTK;GRS(1)PKGEFKDEEETVTTK 127.14 3.7995e-13 158121000.0 9533.2 12085.3 12170.400000000001 9281.0 13802.4 9433.5 10286.9 9559.4 15430.800000000001 14575.4 15081.5 True False 11142.171095637425 12700.39014951012 13896.345724933273 11554.845416639926 11772.085243928714 10431.746708549492 12155.896574209626 10914.47422443469 11935.748437924136 11282.807016945073 11336.347321774969 0.9828713587696304 1.1203247209191523 1.2258221568636163 1.0192741179026215 1.038437241713367 0.9202035199214555 1.072293943469821 0.9627857999260537 1.0528742723855886 0.9952771114619031 1.0 13.468668244728732 -6.453941529743592 24.999460014429655 1.0175162373686564 1.1127065015707795 0.3148947200041733 0.06582719272086938 154.68809615037642 56095.70490313753 0.008702072895705812 0.02022178619722154 3.516077752602905e-07 6.453941529743592 0.09519026420212318 GRS(ph)PKGEFKDEEETVTTK ddPTM_A549_PD325901_60min_R1 4 GRSPKGEFKDEEETVTTK 18 3 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 GRS(1)PKGEFKDEEETVTTK;GRS(1)PKGEFKDEEETVTTK;GRS(0.997)PKGEFKDEEET(0.003)VTTK;GRS(1)PKGEFKDEEETVTTK 172.42 6.942699999999999e-31 321571000.0 19812.9 20615.3 21477.9 20892.2 22783.5 25095.3 21944.8 24519.0 26151.300000000003 24378.5 26525.1 True False 21824.291022513928 22352.623680401633 22935.519451104727 22182.663744371184 21183.265558808052 24890.932197120204 22779.92137265534 24029.9493102166 25052.251804595446 22839.23734953917 23262.680856462695 0.9381674948461857 0.9608790929267194 0.9859362122802334 0.9535729730053246 0.9106115365427905 1.0699941400006423 0.9792474699375313 1.0329828044535438 1.0769288354671978 0.9817973040366116 1.0 14.505729746156609 -7.264126567361777 24.998895023432244 1.0342421366352774 0.9526605669871845 0.5157772472204165 0.03464516585982312 140.07586598418996 1303123.8859368039 0.005456559013746087 0.008965564749352327 5.44343990400481e-08 7.264126567361777 -0.08158156964809293 GRS(ph)PPERPVPGT(ph)PKEPSLGEQSR ddPTM_A549_PD325901_60min_R1 1 GRSPPERPVPGTPKEPSLGEQSR 23 3 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 GRS(1)PPERPVPGT(0.959)PKEPS(0.038)LGEQS(0.002)R 50.042 0.0032346 13568000.0 1193.7 1099.1 1164.3 1026.2 1308.4 1324.7 869.08 1048.7 1250.0 1299.2 1513.3 True False 1314.883545244506 1191.7250142917856 1243.3163995046646 1089.5860433307028 1216.5024977349597 1313.9120824028846 902.1533149788239 1027.7828558107656 1197.466846992092 1217.1682902771415 1327.1736935990814 0.9907396082262251 0.8979420101825701 0.9368151324134452 0.820982248657989 0.9166113701636149 0.990007629551311 0.6797552719209867 0.7744147286581486 0.902268371327309 0.9171130321129084 1.0 10.374141480159611 -10.017738440107221 1.099941427177053 0.986509839456133 0.8771327530725133 0.08648565135781894 0.09035329381184037 0.5294624722111387 1.2900418508777274 0.030750216988369116 0.016937389338441973 9.599786179242686e-11 10.017738440107221 -0.10937708638361976 GRS(ph)PPERPVPGTPK ddPTM_A549_MK2206_60min_R1 4 GRSPPERPVPGTPK 14 2 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GRS(1)PPERPVPGTPK;GRS(0.998)PPERPVPGT(0.002)PK;GRS(1)PPERPVPGTPK;GRS(1)PPERPVPGTPK 91.40100000000001 2.1422e-05 355079000.0 19553.0 20785.300000000003 21154.300000000003 17722.1 26677.8 20389.899999999998 18427.3 19508.199999999997 29894.5 29071.800000000003 31580.1 True False 22853.06837504707 21843.182988805627 24154.297834825138 22064.015295575296 22753.530959867952 22547.54568427978 21775.30188316528 22273.54709135688 23123.443481706916 22504.460188758007 23737.889603579595 0.9627253625613333 0.9201821793590171 1.01754192298471 0.9294851254278357 0.9585321753470787 0.9498546863609848 0.9173225693947804 0.9383120177624427 0.9741153854814447 0.9480396347181769 1.0 14.534904058683129 -9.223736903398164 1.580272871695882 0.9920823114139283 0.9495691252254931 0.04470269857377651 0.02946820314109889 0.27815649383872787 1.4359446785744303 0.005511893692898814 0.004960709139681721 5.973970815186733e-10 9.223736903398164 -0.04251318618843525 GRS(ph)PPERPVPGTPK ddPTM_A549_PD325901_60min_R1 4 GRSPPERPVPGTPK 14 2 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GRS(0.993)PPERPVPGT(0.007)PK;GRS(1)PPERPVPGTPK;GRS(0.999)PPERPVPGT(0.001)PK;GRS(1)PPERPVPGTPK 110.24 2.3728e-06 621706000.0 28490.5 28247.800000000003 27608.1 27511.4 33773.9 28828.1 31190.8 33102.0 30748.9 31967.699999999997 35477.3 True False 31382.834586402423 30628.341241662714 29481.751686991967 29210.7166950773 31401.737777629707 28593.333511526096 32377.78296226068 32441.754641983352 29456.630665180146 29949.25396635819 31113.817009134134 1.0086462415456552 0.9843967788545874 0.9475453197637873 0.938834238386819 1.0092537912790014 0.9189915047431148 1.040623943785344 1.0426799975219812 0.9467379285714933 0.9625708718916081 1.0 14.925267773533031 GRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK ddPTM_A549_MK2206_60min_R1 2 GRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 32 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK 195.42 3.140499999999999e-88 34199000.0 2850.6000000000004 3107.2 2644.4 2447.67 4239.3 3497.9 2238.28 2514.6 5113.0 4616.5 4079.6 True False 3331.7115895212605 3265.343208075747 3019.4156835447934 3047.3492598800817 3615.704585766753 3868.0454562818973 2644.9465032343974 2871.0522506395237 3954.913663783219 3573.6294437015054 3066.5227287679045 1.08647868749367 1.0648358081427711 0.984638285970886 0.9937474884148253 1.1790894461165478 1.2613783749243679 0.8625230390179134 0.9362566348213832 1.2897062939338657 1.1653686470921254 1.0 11.5823879287955 -6.750174307910266 24.972713563029565 1.1152425757136 1.0313267811408897 0.05159172907412113 0.12624756169179954 524.2768791404519 1162223.252083 0.021375887611156663 0.044177107064927015 1.777565825167731e-07 6.750174307910266 -0.08391579457271026 GRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK ddPTM_A549_PD325901_60min_R1 2 GRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 32 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK 172.52 8.249799999999998e-63 238187000.0 2952.06 3087.98 3245.0299999999997 3299.06 2909.35 2900.56 3449.04 3313.8199999999997 2714.94 2990.16 3118.13 True False 3251.7509580082888 3348.214911866753 3465.2572497505994 3502.835443491121 2705.0072927126284 2876.9388010376024 3580.295104587105 3247.7232604585015 2600.840513258169 2801.3607872961034 2734.6197774546354 1.1891053318699374 1.224380420075528 1.2671806436564415 1.2809222958050628 0.9891712606680663 1.0520434411965807 1.309247864768834 1.1876324771853508 0.9510793912559985 1.0244059559547214 1.0 11.417124538771755 -8.75719006845329 24.96905259883089 0.9768985956364095 1.1873999253273837 0.47269811703504094 0.09165254692910141 62.63812419751925 368062.2559773431 0.01617059890272553 0.018020484697738034 1.7490810378988791e-09 8.75719006845329 0.21050132969097424 GRS(ph)PRSPS(ph)GHPHVR ddPTM_A549_PD325901_60min_R1 1 GRSPRSPSGHPHVR 14 2 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 2 GRS(0.993)PRS(0.269)PS(0.738)GHPHVR 47.09 0.012943999999999999 2771400.0 170.41 197.01 138.36 250.29 140.16 200.08 177.94 243.69 271.85 195.32 176.91 True False 187.70989775078843 213.61272410665515 147.74994162626945 265.74984485016745 130.3156451257504 198.45061481631257 184.71160407250414 238.8294117788932 260.4250898838404 182.98746186648026 155.15119152488825 1.2098514739455117 1.3768036326836002 0.9522965320093495 1.7128443696646556 0.8399268084566794 1.2790788963066295 1.1905264939127072 1.539333403962817 1.6785245883339859 1.1794138354208303 1.0 7.277530966244622 GRS(ph)QSDLSSSSSR ddPTM_A549_PD325901_60min_R1 1 GRSQSDLSSSSSR 13 1 J3KP75 J3KP75 PHACTR2 Phosphatase and actin regulator 1 GRS(0.5)QS(0.5)DLSSSSSR 55.864 0.0047051 6968300.0 605.82 742.33 681.23 521.87 558.92 507.49 702.68 756.38 751.74 764.3 972.57 True False 667.3224004188878 804.8887543073621 727.4623643687733 554.1047246472364 519.6633873693236 503.3571696977732 729.4208719212503 741.2934075313685 720.1469820462684 716.0419675637456 852.9500556291931 0.7823698421903802 0.94365285399228 0.8528780314483341 0.649633259286784 0.6092541807573775 0.5901367452593261 0.855174188813647 0.8690935684206513 0.8443014655940666 0.8394887400945711 1.0 9.736317456985802 -9.503192403688988 0.6223478469992956 0.9839076266703324 0.7559001575539588 0.20190941235087856 0.11364291709472893 0.5591146993887427 0.4774306708506058 0.05227332316041468 0.030179590756435986 3.139117675443438e-10 9.503192403688988 -0.2280074691163736 GRS(ph)RT(ph)PPTSR ddPTM_A549_MK2206_60min_R1 2 GRSRTPPTSR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GRS(0.999)RT(0.998)PPT(0.001)S(0.001)R;GRS(0.995)RT(0.996)PPT(0.004)S(0.005)R 53.001000000000005 0.010891 42580000.0 929.51 910.46 986.1899999999999 679.09 1242.05 805.02 597.98 779.44 779.34 1575.53 1361.31 True False 1086.388563662354 956.7985251109179 1126.0465712278922 845.4670804855087 1059.3460903336854 890.206682070972 706.6252256215064 889.928006934889 602.8207343502467 1219.6166787468921 1023.2591567553276 1.0616944461139295 0.9350500494369862 1.10045100871464 0.8262492203504114 1.0352666607868788 0.8699718699745094 0.6905633054505548 0.8696995292539371 0.5891183385660996 1.191894224151581 1.0 9.998955861627687 -7.469217346003042 5.2753052633241335 0.798136717233287 0.9839130495781248 0.050636982770342454 0.16675601062624656 0.24344988086862626 14.859554274114698 0.023918301952314713 0.038083130860973015 3.394553470427788e-08 7.469217346003042 0.1857763323448377 GRS(ph)RT(ph)PPTSR ddPTM_A549_PD325901_60min_R1 2 GRSRTPPTSR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GRS(0.996)RT(0.997)PPT(0.005)S(0.001)R;GRS(0.999)RT(0.999)PPT(0.001)S(0.001)R 50.353 0.013502000000000002 109775000.0 838.71 754.73 805.1300000000001 531.16 904.9 818.11 525.34 592.24 580.6700000000001 692.46 911.4300000000001 True False 923.855221774331 818.333745825165 859.7709634399993 563.9685468481156 841.342945735528 811.4475834035059 545.3321011770785 580.4273085967079 556.2664592343191 648.7379574240368 799.3298880308001 1.1557871607307302 1.0237747369126682 1.0756146821409363 0.7055516818437603 1.052560348779438 1.015159817684984 0.682236595106607 0.7261423816224706 0.6959160010952634 0.8116022772803403 1.0 9.642647224346623 -7.726274762959299 24.989628047094453 0.8290401239510762 0.9974022223561263 0.3810906716812349 0.13478118428502073 223.6765458485109 158954.58603327005 0.024703922762133297 0.03664099955200378 1.878128214685535e-08 7.726274762959299 0.16836209840505012 GRS(ph)RTPPTSR ddPTM_A549_MK2206_60min_R1 1 GRSRTPPTSR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRS(0.98)RT(0.014)PPT(0.003)S(0.003)R 40.066 0.03393 6556500.0 358.71 297.4 479.35 386.06 520.61 252.02 327.18 439.2 523.44 716.23 608.03 True False 419.2514783825055 312.53638970189456 547.3290379319304 480.6447173308918 444.02895864789684 278.68858912266325 386.6243709134827 501.45794499358954 404.88167576191836 554.4331455566615 457.03937022569573 0.917320269751532 0.6838281558710303 1.1975533697712908 1.0516483888325403 0.9715332804450214 0.60976932684167 0.8459323115261589 1.09718763341101 0.8858792089661317 1.2130971239586443 1.0 8.836174636858734 -10.989336594182108 0.9455378811950568 1.006694136582138 0.915463546721958 0.09377484993196794 0.17412485202002181 2.4395610999087554 3.3667939761051575 0.1686073457841673 0.028450477831792335 1.0248573162855814e-11 10.989336594182108 -0.09123058986018007 GRS(ph)SESSCGVDGDYEDAELNPR ddPTM_A549_MK2206_60min_R1 1 GRSSESSCGVDGDYEDAELNPR 22 1 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 GRS(0.492)S(0.492)ES(0.008)S(0.008)CGVDGDYEDAELNPR 170.1 1.2199e-40 8878600.0 470.37 477.14 391.81 527.69 848.48 664.81 685.13 510.46 1209.8 905.53 1367.0 True False 549.7569565576066 501.42438797028234 447.3745496028153 656.9740736889046 723.6697159746599 735.1597529348375 809.6092525336338 582.8192682181865 935.7822316536153 700.9701440821016 1027.5361727193176 0.5350244314053735 0.4879870911437506 0.43538569393509846 0.63936831727321 0.7042766329670984 0.7154587570277724 0.787913140216804 0.5672007309249149 0.910704904117506 0.6821853699096772 1.0 10.004973467166806 -7.766477291084588 0.2943856759789544 1.0400115936783334 0.39390277703879184 0.37757307900244275 0.13054953222521612 0.5922455741502185 0.12210295025445983 0.06295686194344884 0.13515291936067306 1.7120746973959263e-08 7.766477291084588 -0.6461088166395416 GRS(ph)SESSCGVDGDYEDAELNPR ddPTM_A549_PD325901_60min_R1 1 GRSSESSCGVDGDYEDAELNPR 22 1 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 GRS(0.472)S(0.472)ES(0.028)S(0.028)CGVDGDYEDAELNPR 67.832 0.00021483 10142000.0 588.17 691.96 732.31 483.7 583.33 509.61 514.89 548.13 834.74 607.44 604.7 True False 647.8805854121309 750.2738976338311 782.0089603377662 513.5770504375962 542.3589131792522 505.45990512065686 534.484420708619 537.1971171503338 799.6587806865438 569.086134733641 530.3257335091283 1.2216653737037242 1.4147416393870256 1.4745823386002175 0.9684181211409312 1.0226901674005167 0.9531121595327158 1.007841760142343 1.0129569115866546 1.5078634321500062 1.0730879132868734 1.0 9.050734945240464 -11.337906093524815 1.9673601677679236 0.9985906010235565 1.2284030149938336 0.012119639112882608 0.20413142832674105 0.6497426874828652 4.542061378068904 0.18618303875524786 0.03567780529519979 4.592973148795585e-12 11.337906093524815 0.22981241397027719 GRS(ph)YDSSMESR ddPTM_A549_MK2206_60min_R1 5 GRSYDSSMESR 11 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 GRS(0.962)Y(0.004)DS(0.01)S(0.003)MES(0.021)R;GRS(0.996)Y(0.001)DS(0.003)SMESR;GRS(0.976)YDS(0.009)S(0.012)MES(0.003)R;GRS(1)YDSSMESR;GRS(0.966)Y(0.005)DS(0.014)S(0.014)MES(0.001)R 125.73 7.2643e-07 47128800.0 5011.21 4903.9 4371.42 4220.83 7154.7300000000005 4774.93 4699.110000000001 5006.16 6152.87 7358.72 7777.79 True False 5856.979735678393 5153.487563749568 4991.353088549906 5254.933539480256 6102.278694813518 5280.209923257989 5552.877460734932 5715.798510722007 4759.2547691143845 5696.380041147001 5846.3500869162945 1.0018181683621525 0.8814880202406451 0.8537554225020137 0.8988400388886074 1.0437757924332949 0.9031634857232916 0.9498024200025017 0.977669558912243 0.8140557267970062 0.9743480900836036 1.0 12.513320506815912 -5.2428402907684415 22.63214700567878 0.9188358461031708 1.0018184315052323 0.07031770908797985 0.06533425026058363 2154.135875034478 2621086.078245053 0.010531119468920259 0.42211608441863835 5.7168883321327875e-06 5.2428402907684415 0.08298258540206149 GRS(ph)YDSSMESR ddPTM_A549_PD325901_60min_R1 7 GRSYDSSMESR 11 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 GRS(0.99)YDS(0.008)S(0.002)MESR;GRS(1)YDSSMESR;GRS(0.976)Y(0.007)DS(0.008)S(0.008)MES(0.001)R;GRS(1)YDSSMESR;GRS(0.679)Y(0.065)DS(0.127)S(0.127)MES(0.002)R;GRS(0.942)Y(0.003)DS(0.02)S(0.028)MES(0.008)R;GRS(0.917)Y(0.003)DS(0.036)S(0.036)MES(0.007)R 145.52 5.978e-12 103269100.0 7983.860000000001 9164.98 7464.73 8486.23 9988.03 8722.39 8231.01 8044.130000000001 8012.459999999999 9738.67 10042.579999999998 True False 8794.375589792915 9937.345029100103 7971.331466868041 9010.405153473312 9286.505229632916 8651.357747739185 8544.245589731492 7883.6835166520905 7675.724170280212 9123.76871418818 8807.406325159749 0.9985204798228043 1.1282941495173788 0.9050713879404737 1.0230486502858014 1.054397275064345 0.9822821189735749 0.970120518378209 0.8951197691573627 0.8715078976603239 1.0359200401739943 1.0 13.10450151007961 -7.7320684338615315 2.3855491618891427 0.9346432782215354 1.0207641240308005 0.17010992648047496 0.06574695466906329 0.3074964056153537 3.590315250501768 0.010646011532037659 0.01609286488724905 1.8532395765697856e-08 7.7320684338615315 0.08612084580926516 GRSECDSS(ph)PEPK ddPTM_A549_MK2206_60min_R1 4 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRS(0.001)ECDS(0.119)S(0.88)PEPK;GRS(0.001)ECDS(0.359)S(0.64)PEPK;GRS(0.001)ECDS(0.157)S(0.842)PEPK;GRSECDS(0.177)S(0.823)PEPK 97.911 0.00020976 125456500.0 2676.07 3309.8999999999996 3272.6499999999996 2654.48 3847.67 3382.41 2682.11 2895.52 4570.710000000001 4714.59 5167.4 True False 3127.72519237008 3478.3597722740474 3736.7609804692406 3304.8277191641337 3281.682839977628 3740.334381137955 3169.414669205821 3305.968827158098 3535.451482924036 3649.560844575038 3884.1919670152124 0.8052447507566328 0.895516957403878 0.9620433315866043 0.8508404700974941 0.8448817328921621 0.9629633171843965 0.8159778651829461 0.8511342526920864 0.9102154355261787 0.9395933248323781 1.0 11.923398788976595 -9.967675917655408 0.7374430700692802 0.9948420921676039 0.8771686312204229 0.3033237764767247 0.05221129922905695 0.4147765637221341 0.45737408696876664 0.02378858923485758 0.010470239320861954 1.0772688010178752e-10 9.967675917655408 -0.11767346094718101 GRSECDSS(ph)PEPK ddPTM_A549_PD325901_60min_R1 4 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRSECDS(0.083)S(0.917)PEPK;GRSECDS(0.058)S(0.942)PEPK;GRSECDS(0.133)S(0.867)PEPK;GRSECDS(0.026)S(0.974)PEPK 136.7 2.298e-08 170391700.0 11612.39 12104.6 13053.2 11672.050000000001 14015.3 11707.0 12975.600000000002 15391.8 9489.0 12675.4 14427.5 True False 12791.2712842103 13124.697123097398 13939.068647268141 12393.006019351136 13030.913678160181 11611.662073443475 13469.393558520762 15084.798474366482 9090.210328886376 11875.073080802707 12653.00896345784 1.0109272285471198 1.037278734331241 1.1016406206242697 0.9794512953513589 1.02986678629516 0.9176996639280193 1.0645209844884058 1.1921906099910071 0.7184228158803252 0.9385177166236246 1.0 13.627192887034859 -8.762635623617017 24.999989591411275 0.8670330054596674 1.0377061869581345 0.3606468226184444 0.09151324701004113 28.511957975740486 595861.6871778467 0.02000603543977564 0.02188303098810801 1.7272864907534788e-09 8.762635623617017 0.1706731814984671 GRSS(ph)ESSCGVDGDYEDAELNPR ddPTM_A549_MK2206_60min_R1 1 GRSSESSCGVDGDYEDAELNPR 22 1 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 GRS(0.402)S(0.572)ES(0.018)S(0.008)CGVDGDYEDAELNPR 149.07 1.0671e-27 9808600.0 1232.4 1899.8 1386.1 1891.2 2215.9 1866.0 1390.9 2069.3 2772.2 2906.8 2666.2 True False 1440.398990712832 1996.4917052981166 1582.669822629494 2354.544084899194 1889.9440453849793 2063.458881449448 1643.6085258987803 2362.6296119654694 2144.3011262937275 2250.1518611397228 2004.1089566234389 0.7187228947570016 0.9961991830333636 0.7897124641845853 1.1748583215087143 0.9430345786035472 1.02961412084401 0.8201193455409547 1.1788927963008922 1.0699523692097495 1.1227692255469093 1.0 10.968745229775674 -4.3539226526717245 0.683639918234175 1.0297885975814538 6.109612745126799e-11 0.3567659638432664 0.11850524950093279 6.8357589578951155 0.9009138208753997 0.017066505946215307 7.320281364980099 4.426672038425701e-05 4.3539226526717245 -1.0297885975203578 GRST(ph)DEYS(ph)EADEEEEEEEGKPSR ddPTM_A549_MK2206_60min_R1 1 GRSTDEYSEADEEEEEEEGKPSR 23 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 GRS(0.472)T(0.516)DEY(0.017)S(0.994)EADEEEEEEEGKPS(0.001)R 57.299 0.0016675000000000001 3629200.0 334.72 364.04 286.33 216.2 426.97 353.84 418.4 444.71 418.23 482.43 453.38 True False 391.2125528816935 382.56808105944117 326.9358995119425 269.16900970558686 364.16327860373883 391.2831139400174 494.417864142677 507.7490043672564 323.50157277607167 373.4487279378137 340.79323334856156 1.1479469502305621 1.1225812123685934 0.9593380018128299 0.7898308515717569 1.068575438031877 1.148153999700502 1.4507854492433216 1.4899034214330582 0.9492605519112404 1.0958220157964589 1.0 8.412752880058575 GRST(ph)DEYS(ph)EADEEEEEEEGKPSR ddPTM_A549_PD325901_60min_R1 1 GRSTDEYSEADEEEEEEEGKPSR 23 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 GRS(0.464)T(0.534)DEY(0.003)S(0.999)EADEEEEEEEGKPSR 99.446 4.0155000000000005e-08 4503900.0 578.29 549.41 407.11 546.97 504.42 527.35 536.11 595.88 600.61 893.16 823.69 True False 636.9975750854029 595.7107088545629 434.73893275130484 580.7550946410004 468.99127935453066 523.055436442335 556.511959420649 583.9947059411829 575.368450377537 836.7657251723608 722.3813518011151 0.8818023520363245 0.8246485147620104 0.6018136150211647 0.8039453028417779 0.6492294937918782 0.7240710673637957 0.7703852792338789 0.8084299303755663 0.7964885153014671 1.1583434747949277 1.0 9.496616840052926 -10.28120661895753 0.5072095890980285 1.024102774222116 0.7450410775629498 0.6279974786124063 0.09010874143197402 0.6050286039360598 0.26318013874091756 0.07853373428191268 0.019130386392990435 5.233513888776918e-11 10.28120661895753 -0.27906169665916625 GRT(ph)PPNLLSTLQYPR ddPTM_A549_MK2206_60min_R1 1 GRTPPNLLSTLQYPR 15 1 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 GRT(0.999)PPNLLSTLQYPR 43.12 0.031498000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GRT(ph)SSTNEDEDLNPEQK ddPTM_A549_MK2206_60min_R1 1 GRTSSTNEDEDLNPEQK 17 1 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 Q99081 TCF12 Transcription factor 12 1 GRT(0.354)S(0.354)S(0.246)T(0.046)NEDEDLNPEQK 150.53 3.9604e-17 49278000.0 4183.4 4947.5 4755.2 4187.1 6201.6 4636.9 5049.8 5059.0 6909.4 8314.4 7624.3 True False 4889.455645689757 5199.306617518912 5429.558863406517 5212.9396879660635 5289.352855209843 5127.573680274892 5967.283294330047 5776.1287425377195 5344.431932044546 6436.171265398412 5730.975890024789 0.8531628364028256 0.9072288415257009 0.9474056369451995 0.9096076807860233 0.922941041231106 0.894712136060428 1.0412333621428367 1.0078787371259967 0.9325518087324267 1.1230497892341635 1.0 12.484565111571042 -7.726582126123823 24.999887960925673 0.97593520734392 0.9087435052667888 0.43019722104229485 0.055900601632043974 137.69266426916735 98753.94570704702 0.005991118491276767 0.008886046613839411 1.876799477552136e-08 7.726582126123823 -0.06719170207713121 GRT(ph)SSTNEDEDLNPEQK ddPTM_A549_PD325901_60min_R1 1 GRTSSTNEDEDLNPEQK 17 1 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 Q99081 TCF12 Transcription factor 12 1 GRT(0.342)S(0.342)S(0.204)T(0.113)NEDEDLNPEQK 167.61 4.1741e-30 76512000.0 10019.0 11376.0 11671.0 14808.0 14233.0 12709.0 14209.0 14097.0 13938.0 14048.0 15922.0 True False 11036.121504402023 12334.69544407548 12463.064243424327 15722.656528591939 13233.3231811844 12605.502117655515 14749.731270463139 13815.824276117444 13352.23433070063 13161.006882553322 13963.694937873894 0.7903439278430969 0.8833403693616896 0.8925334088773748 1.125966773017018 0.9476949503738801 0.9027339951022177 1.056291428313667 0.9894103485922355 0.956210687078619 0.9425160705034145 1.0 13.769393123619212 -5.7944246393828465 2.339607159110035 0.9852953103852856 0.8169257462690408 0.4922611249887403 0.061432160686751905 0.18160675444315774 1.9119812119198965 0.00795548559686775 0.039854678247417216 1.605370804667516e-06 5.7944246393828465 -0.16836956411624482 GRT(ph)SSTNEDEDLNPEQKIER ddPTM_A549_MK2206_60min_R1 2 GRTSSTNEDEDLNPEQKIER 20 2 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 Q99081 TCF12 Transcription factor 12 1 GRT(0.329)S(0.329)S(0.329)T(0.012)NEDEDLNPEQKIER;GRT(0.307)S(0.307)S(0.307)T(0.079)NEDEDLNPEQKIER 109.39 2.1628e-10 9761800.0 1915.75 2137.9 1833.38 1578.15 2217.76 1768.26 1663.5 1394.13 2715.0 2796.7 3600.7 True False 2239.0817644093704 2246.7099782907903 2093.3808523284483 1964.796820845845 1891.530441848907 1955.3760995240086 1965.7364173072253 1591.7521968440624 2100.056834964098 2164.9235276074933 2706.546815735512 0.8272835893292662 0.8301020197502995 0.773450819382766 0.7259423001378624 0.6988722422430658 0.7224615839473774 0.7262894570597075 0.5881118285447056 0.7759174246514562 0.7998840127282886 1.0 11.402237627543876 -10.226813422082 0.8569131181949222 0.9875501506602896 0.7394008084178025 0.2549885522381242 0.08432450596278161 0.2564747950393817 0.36710338914669866 0.03488938441617589 0.013759263451759346 5.93180106862236e-11 10.226813422082 -0.24814934224248708 GRT(ph)SSTNEDEDLNPEQKIER ddPTM_A549_PD325901_60min_R1 1 GRTSSTNEDEDLNPEQKIER 20 2 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 Q99081 TCF12 Transcription factor 12 1 GRT(0.33)S(0.33)S(0.33)T(0.009)NEDEDLNPEQKIER 92.275 1.0909e-06 12899000.0 1887.8 1950.8 1578.1 1815.7 1535.8 2800.1 2295.7 2489.5 2095.7 2401.3 2836.8 True False 2079.448066275091 2115.2007623331942 1685.199355886207 1927.851665246109 1427.9307062223716 2777.296913970196 2383.0641197552436 2439.8449695250315 2007.6250169930631 2249.681508191579 2487.891583956831 0.8358274450882073 0.8501981259846959 0.6773604471968213 0.7748937605150725 0.5739521430235879 1.1163255392154527 0.9578649387788571 0.9806878182547712 0.8069584020217092 0.9042522281511985 1.0 11.2807079024876 -7.25879745899626 24.999713371606497 0.9297591419400332 0.7466193462634862 0.5239940015219684 0.10133292415734299 193.8792236099237 1834618.2313966432 0.016712985313142643 0.028125566152618027 5.510646353412174e-08 7.25879745899626 -0.18313979567654692 GRWES(ph)QQDVSQTTVSR ddPTM_A549_MK2206_60min_R1 4 GRWESQQDVSQTTVSR 16 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 GRWES(1)QQDVSQTTVSR;GRWES(1)QQDVSQTTVSR;GRWES(1)QQDVSQTTVSR;GRWES(0.982)QQDVS(0.015)QT(0.003)TVSR 180.04 1.3163e-29 136024600.0 7480.9 7271.25 6175.95 5459.139999999999 10010.5 6961.389999999999 7561.2 6270.91 11310.600000000002 10976.6 11743.0 True False 8743.493029555031 7641.325566980165 7051.7925770641605 6796.629545070105 8537.96871082916 7698.0396692033055 8934.9721662419 7159.830696356437 8748.767159316738 8496.97843642022 8826.889009687595 0.9905520529326883 0.8656872833218745 0.7988989744093021 0.7699915040973937 0.9672681622549755 0.8721124351687932 1.012244762162035 0.8111386342910232 0.9911495601354999 0.9626243659679764 1.0 13.107689341887353 -8.490052264419557 0.6404459390272851 1.0030035646870574 0.867577042051882 0.18444836425056277 0.07830563710796311 0.564229588415139 0.4891753151655199 0.020712094215723682 0.024695846192028074 3.2355471695284215e-09 8.490052264419557 -0.1354265226351754 GRWES(ph)QQDVSQTTVSR ddPTM_A549_PD325901_60min_R1 3 GRWESQQDVSQTTVSR 16 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 GRWES(0.999)QQDVS(0.001)QTTVSR;GRWES(1)QQDVSQTTVSR;GRWES(1)QQDVSQTTVSR 174.22 1.0332999999999999e-28 159437900.0 12688.800000000001 11924.300000000001 13085.3 12928.300000000001 11799.0 12225.699999999999 13054.0 11563.4 14917.2 16739.6 16965.2 True False 13976.957634999153 12929.202609334487 13973.347146301126 13726.851728700389 10970.278944340253 12126.137952617917 13550.777113422891 11332.758915688188 14290.281959960352 15682.658799201981 14878.587951263542 0.9394008141620845 0.868980487374576 0.9391581507648689 0.9225910263570849 0.7373198975786286 0.8150059664491295 0.910756931895013 0.761682422606896 0.9604595548159374 1.0540421477207556 1.0 13.860949993873458 -8.942153933120204 10.992639498570787 0.9825913260779247 0.8624476860439858 0.4595778913655657 0.0682710817841715 0.385006349651371 71.64501874351221 0.011363432058398638 0.012069604145967848 1.1424733200797369e-09 8.942153933120204 -0.12014364003393885 GRYEAEGQALTEKVS(ph)LLEK ddPTM_A549_MK2206_60min_R1 1 GRYEAEGQALTEKVSLLEK 19 2 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 GRYEAEGQALT(0.001)EKVS(0.999)LLEK 98.74 1.6157e-07 2560800.0 615.44 759.27 538.2 556.25 866.58 700.83 540.93 682.27 780.97 1021.8 964.2 True False 719.3112259366318 797.9135998956208 614.5248528527483 692.5312749710112 739.1072299515844 774.9913654266966 639.2099790886672 778.9838618642442 604.0815419528224 790.9746703290792 724.7625294337718 0.9924784970583415 1.1009310877578053 0.847898212029328 0.955528530858319 1.0197922766909868 1.0693038532664851 0.8819578180842994 1.0748125492536615 0.8334889255723076 1.091357014478986 1.0 9.501364559069634 -8.759828323237356 24.999989097023878 0.9213697754468314 0.9901173328501088 0.0 0.09654590891658928 72.97169379304897 1132358.9775055235 0.015400000655319846 0.017016952110513586 1.7384879178273234e-09 8.759828323237356 0.06874755740327743 GRYPDHSVDRR ddPTM_A549_MK2206_60min_R1 3 GRYPDHSVDRR 11 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 0 ;; 56.043 0.005295899999999999 14767100.0 1204.47 997.79 1229.98 1295.04 1312.3600000000001 783.9300000000001 842.76 982.3700000000001 1566.84 1858.2599999999998 1931.5000000000002 False True 1407.7550895357708 1048.5732490943285 1404.4096590706492 1612.324858136555 1119.3135824727794 866.8849522693811 995.8785831378651 1121.62395588195 1211.9532417293358 1438.4777753823798 1451.8552433118948 0.9696249650374751 0.7222298875350541 0.9673207198446209 1.110527282636391 0.7709539829325277 0.5970877305177404 0.6859351768886546 0.7725453078389284 0.8347617624500171 0.9907859492252141 1.0 10.503681901792676 -4.236485130401155 19.856953091004737 0.8741321613554567 0.8380416277069049 0.0 0.15400653215651008 0.0 0.0 0.02147773327341238 0.0 5.801160344951798e-05 4.236485130401155 -0.03609053364855175 GRYPDHSVDRR ddPTM_A549_PD325901_60min_R1 2 GRYPDHSVDRR 11 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 0 ; 84.884 0.0001595 24026000.0 1225.79 1323.37 1332.94 1632.1799999999998 1335.33 1468.83 1337.35 1616.58 1409.02 1751.25 1687.35 False True 1350.2312984210962 1434.8950342674189 1423.401324019367 1732.9960516502697 1241.5410274384153 1456.8683354690345 1388.2435860759997 1584.3360437175231 1349.803789399039 1640.6757761298059 1479.8166469929358 0.9124314834306237 0.9696437982254085 0.9618768155580573 1.1710883609613445 0.8389830118219653 0.9844924629206372 0.9381186438853643 1.0706299641492587 0.9121425901931232 1.1087020675593453 1.0 10.531202718042767 GRYRS(ph)PYSGPK ddPTM_A549_PD325901_60min_R1 3 GRYRSPYSGPK 11 2 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23 G3XAC6 RBM39 RNA-binding protein 39 1 GRY(0.24)RS(0.752)PY(0.006)S(0.001)GPK;GRY(0.323)RS(0.672)PY(0.003)S(0.001)GPK;GRY(0.012)RS(0.978)PY(0.008)S(0.002)GPK 51.54600000000001 0.0080105 31109800.0 8876.5 7962.299999999999 7851.599999999999 10161.6 9675.0 13233.7 9535.400000000001 10869.7 10023.9 10419.0 12628.300000000001 True False 9777.635745466072 8633.310964694281 8384.456791506338 10789.258953331973 8995.46137693804 13125.929134819244 9898.274864971096 10652.895306385308 9602.63034205123 9761.14256188234 11075.099157389332 0.8828485963434838 0.7795244847929074 0.7570547831991381 0.9741907318394847 0.81222400351479 1.1851748637448174 0.8937414215715571 0.9618780974324435 0.8670468955254755 0.8813593831681121 1.0 13.435031995100259 -6.265882720669547 24.86850468972074 0.9453837485685629 0.8037808060006969 0.2981749417502878 0.09593665597691597 313.8916475691721 1756796.0190017335 0.013059019924939609 0.031319068681324454 5.421472751422696e-07 6.265882720669547 -0.14160294256786599 GS(ph)ASGSEPAGDSDR ddPTM_A549_MK2206_60min_R1 2 GSASGSEPAGDSDR 14 0 A0A0C4DG27;P50747 A0A0C4DG27 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 GS(0.973)AS(0.013)GS(0.013)EPAGDSDR;GS(0.986)AS(0.014)GSEPAGDSDR 90.73100000000001 6.777600000000001e-05 4075400.0 414.52 464.11 430.61 634.11 633.2 354.0 369.46000000000004 271.56 540.81 874.05 552.7 True False 484.4808419590095 487.7312166259127 491.67697303404265 789.4669784662792 540.0571187949679 391.4600450338178 436.586099632298 310.05446161762075 418.31739849610847 676.6014979459117 415.4493362560108 1.1661610686999864 1.173984825734226 1.1834823891283301 1.9002725713341588 1.299934965986251 0.942256999521573 1.050876873620186 0.7463111252308201 1.0069035186478918 1.6286017063918765 1.0 8.698528741887545 -7.21213273135814 5.729743950785052 0.9820353826976249 1.360151893380214 0.16920634186394234 0.2825478120367606 0.154866255839744 12.236070962184215 0.030134089297108643 0.052260231241300324 6.135744526624461e-08 7.21213273135814 0.378116510682589 GS(ph)ASGSEPAGDSDR ddPTM_A549_PD325901_60min_R1 1 GSASGSEPAGDSDR 14 0 A0A0C4DG27;P50747 A0A0C4DG27 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 GS(0.983)AS(0.015)GS(0.002)EPAGDSDR 79.633 0.00057021 1899500.0 177.49 196.2 183.1 188.98 284.2 247.67 266.38 321.71 185.36 368.41 386.62 True False 195.50865413876792 212.73446256395988 195.526267069745 200.65286539527992 264.2387724367743 245.6530576347267 276.517236668729 315.29324167338734 177.5699638067634 345.1485297267559 339.0681909861077 0.5766057074542221 0.6274090823597075 0.5766576525538961 0.5917773201069783 0.779308644872561 0.7244945535005718 0.8155210191334594 0.9298815107262761 0.5236998589880665 1.017932495298261 1.0 8.405431636895061 -10.996761202139357 1.214373958225461 1.0038650640518576 0.673393634417477 0.532066460321282 0.11724630907233903 0.34587176415666404 0.8899013743983634 0.09697868667210807 0.02106161728522237 1.0074854848852558e-11 10.996761202139357 -0.3304714296343806 GS(ph)DGEDSASGGK ddPTM_A549_MK2206_60min_R1 1 GSDGEDSASGGK 12 0 Q14674-2;Q14674 Q14674-2 ESPL1 Separin 1 GS(1)DGEDSASGGK 85.845 2.5455e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GS(ph)DGEDSASGGK ddPTM_A549_PD325901_60min_R1 1 GSDGEDSASGGK 12 0 Q14674-2;Q14674 Q14674-2 ESPL1 Separin 1 GS(1)DGEDSASGGK 110.29 8.4613e-05 7965300.0 1207.7 1241.5 1174.2 1254.6 1384.3 1205.7 694.03 1226.6 1441.5 1277.6 1805.9 True False 1330.3048149382498 1346.1255620446286 1253.8882730382015 1332.0937925966678 1287.071543575745 1195.8811789485615 720.4416914377886 1202.1345007509146 1380.9187679512806 1196.9321179634205 1583.7857485433024 0.8399525100928624 0.8499417066246092 0.7917032175541886 0.8410820679639718 0.8126550859291023 0.7550776233770768 0.4548858278971254 0.7590259615965013 0.8719100858316158 0.7557411847305148 1.0 10.629161468299099 -9.258204669991185 1.5246051704617642 0.9616383967443525 0.763765408284715 0.0533380633198286 0.12290250410099729 0.2766747286548362 1.3301350279070367 0.025422707798778973 0.022477820382150224 5.518173230042453e-10 9.258204669991185 -0.19787298845963752 GS(ph)DNEEEDKEAAQLR ddPTM_A549_PD325901_60min_R1 1 GSDNEEEDKEAAQLR 15 1 H0YE58 H0YE58 EEF1D 1 GS(1)DNEEEDKEAAQLR 67.43 0.00083415 4635300.0 1554.0 755.49 571.06 1003.8 1424.3 1456.3 971.55 1065.9 938.43 924.47 1009.6 True False 1711.760936005665 819.1577936923856 609.8155656627448 1065.8024462047938 1324.2620815682528 1444.440375634726 1008.5228669025593 1044.6397883176269 898.9910505782319 866.0988064289629 885.4256003817031 1.9332634331644942 0.9251571146567822 0.6887259250239162 1.2037176762737953 1.495622083885274 1.6313514935778162 1.1390260982603049 1.179816562642064 1.0153208244607799 0.978172311773673 1.0 9.79022727657146 -8.556444023512631 2.029112519999514 1.0053409208780726 1.2693237917827243 0.13817281119151903 0.3161234135629733 0.5302941448495558 4.308611872080403 0.057739850463586075 0.06698505018266909 2.7768727359042094e-09 8.556444023512631 0.26398287090465167 GS(ph)DSEDEVLR ddPTM_A549_PD325901_60min_R1 1 GSDSEDEVLR 10 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 GS(0.988)DS(0.012)EDEVLR 60.434 0.008011399999999998 760570.0 153.23 0.0 146.85 229.31 274.32 203.08 140.06 102.44 267.04 162.35 160.8 True False 168.785796798036 0.0 156.81612408078675 243.47395789920446 255.05270955262463 201.4261838109594 145.39005994377283 100.39675383737465 255.81723745661463 152.0991932931757 141.0226193951842 1.1968703852043177 0.0 1.1119927055201322 1.7264886933983508 1.8085943279630676 1.4283253613841038 1.0309697874519679 0.7119195081466705 1.8140156419853777 1.078544661455705 1.0 7.139782772767841 -5.9875359362198814 24.39764118737319 1.3722321659311962 0.5878249475881436 0.29252932829935974 0.427251807456756 148.6599977176593 290986.82586217014 0.06165628500085263 0.191502305525476 1.0291153682807818e-06 5.9875359362198814 -0.7844072183430526 GS(ph)DSLIK ddPTM_A549_MK2206_60min_R1 2 GSDSLIK 7 0 Q99623;Q99623-2 Q99623 PHB2 Prohibitin-2 1 GS(0.995)DS(0.005)LIK;GS(0.992)DS(0.008)LIK 74.464 0.018573 8959200.0 4066.6 4096.9 3200.3 3053.0 5207.2 4112.4 3991.9 4159.9 5619.4 5218.5 4963.1 True False 4752.942661175595 4305.414710725258 3654.1506625504467 3800.985137054376 4441.227777936129 4547.571438409812 4717.176558009449 4749.578564159451 4346.6148723378465 4039.6372255943465 3730.62529540837 1.2740337838339022 1.1540732101999993 0.9795008539313642 1.018860066630815 1.1904781172749683 1.2189837033504634 1.2644466234160048 1.2731320323178 1.1651169785632538 1.082831135725774 1.0 11.865201747576515 -10.457418623403248 0.9610592482083227 1.0070566727127557 1.1659865983306543 0.2014036008833101 0.09468601307830715 0.550075996750042 0.9650964710457638 0.05382830438274069 0.018680640163519453 3.488039356864725e-11 10.457418623403248 0.15892992561789865 GS(ph)DSLIK ddPTM_A549_PD325901_60min_R1 2 GSDSLIK 7 0 Q99623;Q99623-2 Q99623 PHB2 Prohibitin-2 1 GS(0.988)DS(0.012)LIK;GS(0.853)DS(0.147)LIK 102.62 0.010609 11664300.0 4612.1 4776.8 5484.9 5189.5 5735.7 4743.4 5377.799999999999 5592.6 5056.6 5514.6 5852.2 True False 5080.316996751432 5179.357700181061 5857.138297383094 5510.0436287903785 5332.844219090799 4704.77132306926 5582.455121845078 5481.051205690174 4844.088686800173 5166.4072148724745 5132.416500152343 0.9898489330709297 1.0091460231310776 1.1412047906106684 1.0735768674710686 1.0390513355516853 0.916677616270934 1.0876855223420345 1.0679279839287172 0.9438222105817772 1.0066227506514958 1.0 12.325422535822842 -8.759830334119743 24.999821658977776 0.9734715988421515 1.0414233134425115 0.16013198411829688 0.057035546027725606 48.43933436293433 752602.582767189 0.010050165965747659 0.011104004497927675 1.7384798682508588e-09 8.759830334119743 0.06795171460035998 GS(ph)EDSPPKHAGNNESHSSR ddPTM_A549_PD325901_60min_R1 1 GSEDSPPKHAGNNESHSSR 19 1 P48651;P48651-2 P48651 PTDSS1 Phosphatidylserine synthase 1 1 GS(0.544)EDS(0.456)PPKHAGNNESHSSR 95.926 9.5633e-07 8350300.0 598.19 457.32 353.91 441.25 622.71 381.59 622.73 755.41 782.23 650.09 491.08 True False 658.9178084357967 495.8599613646798 377.92846083371626 468.5050103485409 578.9729978328768 378.48245755576124 646.4283309209314 740.3427549423195 749.3555933780998 609.0432064549466 430.680273212606 1.5299465738717986 1.1513412436234287 0.8775151413706643 1.0878255622292285 1.3443220733424812 0.8788014708278101 1.5009471552968507 1.7190078138936449 1.7399347961502274 1.4141423332716505 1.0 8.750473433971822 -7.786458987162226 24.992221456357797 1.4022204405982763 1.139557134706523 0.2729115806715182 0.2558200745934522 370.33795390944664 369931.26315548964 0.0524529140346975 0.07248986089592817 1.6350875542297924e-08 7.786458987162226 -0.26266330589175335 GS(ph)ESPNSFLDQESR ddPTM_A549_PD325901_60min_R1 1 GSESPNSFLDQESR 14 0 A0A5H1ZRR2;Q6P9H4;G9CGD6-3;G9CGD6;G9CGD6-2;Q5T4Y8 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 GS(0.603)ES(0.389)PNS(0.007)FLDQESR 51.211000000000006 0.024263999999999997 1367800.0 639.68 582.47 645.61 607.22 481.3 1018.2 607.68 548.81 728.92 606.79 625.32 True False 704.6198426924728 631.5567910786426 689.4249769683128 644.7266003033227 447.49514839486056 1009.908116783134 630.8055949352552 537.8635540168839 698.2860272875813 568.4771758445706 548.4096042300782 1.2848422734713059 1.1516151179833842 1.25713512610015 1.1756296668226034 0.815987074156199 1.8415215725497032 1.1502453459414776 0.9807697565253254 1.273292848814924 1.036592305203454 1.0 9.099110026854255 -10.944687857856827 0.8368725245157002 0.9776103360107544 1.2169344240946949 0.09105489752807261 0.2387995961771595 1.5405793056398749 1.5982343372457708 0.25768454223747905 0.04130215691477946 1.1358268795920971e-11 10.944687857856827 0.23932408808394046 GS(ph)FMLGLETHDR ddPTM_A549_MK2206_60min_R1 1 GSFMLGLETHDR 12 0 Q92905 Q92905 COPS5 COP9 signalosome complex subunit 5 1 GS(1)FMLGLETHDR 83.499 0.00017214 839990.0 0.0 0.0 0.0 136.07 192.21 0.0 0.0 0.0 95.604 180.91 0.0 True False 0.0 0.0 0.0 169.40715610841443 163.93616361904733 0.0 0.0 0.0 73.94984664821644 140.04230535254828 0.0 0.0 GS(ph)FSQADVHR ddPTM_A549_MK2206_60min_R1 2 GSFSQADVHR 10 0 Q04206;Q04206-4;Q04206-3;Q04206-2;A0A087X0W8;E9PKH5;Q2TAM5 Q04206 RELA Transcription factor p65 1 GS(0.96)FS(0.04)QADVHR;GS(0.855)FS(0.145)QADVHR 69.03 0.0011694000000000001 5311200.0 553.79 937.99 653.6700000000001 526.0699999999999 843.58 606.61 608.87 505.99 759.3599999999999 1271.94 1231.01 True False 647.2562131344204 985.7296845207812 746.3702351621254 654.9571736161798 719.4904994836685 670.8010675648708 719.4937976590624 577.7156320293856 587.3661724487429 984.6078705993046 925.3162428523817 0.6994972995818025 1.0652895073820048 0.8066109731969721 0.7078198169278943 0.7775617309664484 0.7249424969533206 0.777565295342865 0.6243439867093635 0.6347734377147933 1.0640771500607733 1.0 9.853802705697364 -10.980632295724067 1.2834785506940019 0.9985165611923971 0.7500859307592636 0.4504953209353765 0.11460736255404046 0.3888445381827429 1.1505315548679984 0.08280761780505713 0.019537076898060314 1.0456051274503236e-11 10.980632295724067 -0.24843063043313351 GS(ph)FSQADVHR ddPTM_A549_PD325901_60min_R1 1 GSFSQADVHR 10 0 Q04206;Q04206-4;Q04206-3;Q04206-2;A0A087X0W8;E9PKH5;Q2TAM5 Q04206 RELA Transcription factor p65 1 GS(0.795)FS(0.205)QADVHR 57.802 0.0038318000000000007 3445200.0 788.99 1020.1 1790.6 1065.4 884.05 1041.2 832.41 961.54 954.69 961.0 1138.0 True False 869.0876839762602 1106.0674070412617 1912.1208837525157 1131.207338301044 821.9573778069328 1032.7208124087604 864.0878180622301 942.3613303864623 914.5676993239053 900.3222959947136 998.0332143763654 0.8708003616085277 1.1082470914882356 1.9158890267468005 1.1334365650424714 0.8235771775597107 1.0347559555460988 0.8657906426512739 0.9442184055721127 0.9163700026710888 0.9020965264741135 1.0 9.962944018782856 -6.522564147509895 24.99995194612294 0.9500271155821578 1.3201984930840474 0.31474580368623284 0.2408233620005895 9.511229186038824 755802.6229522192 0.03274124654844298 0.06874829727096186 3.0021739517068804e-07 6.522564147509895 0.37017137750188955 GS(ph)FSSENYWR ddPTM_A549_PD325901_60min_R1 1 GSFSSENYWR 10 0 Q6P6C2-3;Q6P6C2;K7ER58;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 GS(0.986)FS(0.013)S(0.001)ENYWR 113.42 0.00010812 3804100.0 2983.8 3073.0 2499.6 2817.5 3381.5 2981.3 2102.1 2554.8 3540.9 3036.0 3381.1 True False 3286.7131794425345 3331.972494694437 2669.2378873158646 2991.530575993233 3143.9951055417037 2957.0212812468644 2182.0965658132563 2503.8425097981712 3392.0882868114404 2844.3064418729987 2965.246134558812 1.10841158888537 1.1236748463682555 0.9001741394101878 1.008864168518116 1.0602813266998785 0.9972262493773821 0.7358905354876796 0.8443961803429544 1.1439483040810494 0.9592142819861368 1.0 11.533936147399405 -8.782423081549709 24.976880594526705 1.0679755722868502 0.972095562545039 0.03213902308771677 0.11709079676943442 396.9511684104518 472488.63689669815 0.021710172772179886 0.023123614463844897 1.6503532716127452e-09 8.782423081549709 -0.09588000974181121 GS(ph)GDTSSLIDPDTSLSELR ddPTM_A549_MK2206_60min_R1 2 GSGDTSSLIDPDTSLSELR 19 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 GS(1)GDTSSLIDPDTSLSELR;GS(0.931)GDT(0.023)S(0.023)S(0.023)LIDPDTSLSELR 146.78 9.039200000000002e-21 9285000.0 938.71 1225.34 1073.08 834.11 1463.19 1157.58 1108.07 1130.31 1575.29 1353.8 1378.67 True False 1097.1412987439485 1287.7045721496957 1225.2588797830304 1038.4669874446204 1247.9566892760727 1280.074347260584 1309.3919759096 1290.534903929198 1218.4893302212138 1047.975639745066 1036.3081896437027 1.0587017546596453 1.2425884355815295 1.1823305962720332 1.002083161961366 1.2042331632109726 1.235225543957818 1.2635159974561114 1.2453196035948553 1.175798225275193 1.011258668239778 1.0 10.017237397291122 -10.441321917598763 0.8780215484751128 1.0045876222805257 1.181047219977399 0.4222458208584273 0.07749766030011215 0.43473720729177373 0.625633755156726 0.04582887614172755 0.01492784817446596 3.619745879424431e-11 10.441321917598763 0.17645959769687325 GS(ph)GGGGGGGGQGSTNYGK ddPTM_A549_MK2206_60min_R1 2 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK 252.66 1.6097e-86 43457000.0 6194.0 5556.3 5049.7 4627.6 6177.1 5518.299999999999 4708.9 5443.5 7057.5 6325.3 6343.599999999999 True False 7239.39577123927 5839.091937123866 5765.823391769832 5761.362207740855 5268.456772754887 6102.242843248918 5564.446177011117 6215.13279501959 5458.987518511651 4896.410336888361 4768.30904554664 1.5182312434217116 1.2245623933661103 1.2091966642042256 1.2082610738332233 1.1048899562572103 1.2797498620497563 1.1669642474637898 1.3034249113580862 1.1448476737492654 1.0268651402663092 1.0 12.219262028018507 -2.000000065044223 0.027684943303389054 3.9539966068725e-09 2.923676581630622 0.5447554653946054 0.09148327470682796 665.5326783152218 1.3760449260916217 47.52784180332883 110.041722814082 0.009999998502301531 2.000000065044223 2.923676577676625 GS(ph)GGGGGGGGQGSTNYGK ddPTM_A549_PD325901_60min_R1 2 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK 231.93 1.4322999999999997e-64 52905000.0 12505.4 13296.900000000001 13312.1 13724.7 14624.1 13477.3 14713.8 13318.7 14895.3 15001.400000000001 15094.6 True False 13774.939002011084 14417.476428474616 14215.539158160316 14572.443547944758 13596.953666406162 13367.54533718457 15273.741710700295 13053.048080181983 14269.302340801049 14054.209043845063 13238.05989255316 1.0405557244653303 1.0890928538996048 1.0738385589384605 1.1007990344674474 1.0271107531440382 1.0097813007104048 1.1537749364083383 0.9860242502396253 1.0778998173915195 1.061651719203281 1.0 13.6924040826247 -11.045558467858026 0.6755645182019905 0.9860710743021849 1.0644087835830967 0.0 0.047629346071212775 1.4416753312503767 0.8142174658676096 0.07109853555272673 0.00801318354660452 9.004125345556657e-12 11.045558467858026 0.07833770928091177 GS(ph)GGLFSPSTAHVPDGALGQR ddPTM_A549_MK2206_60min_R1 3 GSGGLFSPSTAHVPDGALGQR 21 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GS(0.998)GGLFS(0.002)PSTAHVPDGALGQR;GS(0.991)GGLFS(0.008)PSTAHVPDGALGQR;GS(0.459)GGLFS(0.383)PS(0.079)T(0.079)AHVPDGALGQR 93.76700000000001 5.4339e-07 7589600.0 2643.99 3091.24 2610.88 2474.21 4275.9 3414.76 2808.54 2928.6000000000004 4718.0 4795.9 4167.9 True False 3090.2308726507804 3248.570912246419 2981.1420435083305 3080.3915610715076 3646.920774250477 3776.1076366657644 3318.8153636693933 3343.7380184613517 3649.3805330978325 3712.5028591027904 3132.8954018118816 0.9863817575472112 1.0369228766359826 0.951561307084882 0.983241112770631 1.1640735825847595 1.2053091956028557 1.0593444523395152 1.0672996029575488 1.1648587217394 1.1850069609587661 1.0 11.61328088781939 -6.734927599320236 24.759137379770085 1.0920671326229265 0.9902003121766314 0.4538391134685811 0.0645577096197933 200.4871531638502 187232.20556241495 0.010706544707992609 0.02228215694132274 1.8410788998046845e-07 6.734927599320236 -0.10186682044629514 GS(ph)GGLFSPSTAHVPDGALGQR ddPTM_A549_PD325901_60min_R1 1 GSGGLFSPSTAHVPDGALGQR 21 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GS(0.298)GGLFS(0.21)PS(0.23)T(0.262)AHVPDGALGQR 53.481 0.0027605999999999998 9814400.0 3464.9 3701.6 3872.6 2809.6 3850.1 3625.3 3215.5 3655.5 3019.9 3941.2 4091.8 True False 3816.6540972754365 4013.5468227663278 4135.417923835579 2983.1426109354366 3579.682258123943 3595.7767587643857 3337.867612089115 3582.588184815728 2892.984104985135 3692.3519593905994 3588.5345400573055 1.0635690014048154 1.1184361688496482 1.152397413950916 0.8312982855914767 0.9975331763329716 1.0020181549393599 0.9301478291012387 0.9983429572224536 0.8061742398441389 1.0289303107367154 1.0 11.809179091544257 -6.251608290960756 24.995859718961707 0.9235214218572368 1.112164402639474 0.4623299424149474 0.07418446292167798 437.24273130245194 1111701.2506273712 0.01164519716793183 0.030395291431317542 5.602626989167303e-07 6.251608290960756 0.18864298078223707 GS(ph)GGSSGDELREDDEPVK ddPTM_A549_MK2206_60min_R1 1 GSGGSSGDELREDDEPVK 18 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GS(0.361)GGS(0.319)S(0.319)GDELREDDEPVK 70.99 0.00029919 9880300.0 837.81 921.06 825.88 819.25 1212.9 891.1 899.87 1050.1 1319.5 1306.8 1241.8 True False 979.2118455121041 967.9380198346577 943.0022026644884 1019.9662867775305 1034.4840167189143 985.3956105356924 1063.364730894051 1198.954890796375 1020.6353568085191 1011.5929723879837 933.4267880635316 1.049050507264268 1.0369726176840526 1.0102583456178944 1.0927116082596386 1.1082647615728214 1.0556753064479478 1.1392052858265254 1.2844659121940378 1.0934283972349976 1.0837410982029068 1.0 9.866393061032051 -4.078149376754208 12.333805241836018 1.0696951715954155 1.0497202291741285 0.0 0.07616950488789784 0.0 0.0 0.011088304423449716 0.0 8.353156597491556e-05 4.078149376754208 -0.019974942421286945 GS(ph)GLAGPK ddPTM_A549_MK2206_60min_R1 1 GSGLAGPK 8 0 Q9Y6W5 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 1 GS(1)GLAGPK 79.97399999999999 0.0039949 21051000.0 9925.3 12635.0 10406.0 11163.0 13209.0 10148.0 9379.9 10249.0 17876.0 13766.0 13893.0 True False 11600.447989712813 13278.067531551582 11881.727273849308 13897.93550112612 11265.973597856497 11221.854624302778 11084.106414607786 11701.82713624612 13827.114542106166 10656.251039097782 10442.984672706269 1.1108364469816454 1.2714820472977493 1.1377712068182317 1.3308394043179717 1.0788078265882346 1.0745830790724187 1.0613925771218595 1.120544317835681 1.324057726355248 1.0204219744714274 1.0 13.350246481985595 -11.141793882255822 1.5282975888225887 1.0004156894297256 1.1873717163865996 0.27152554731318224 0.09522093450740204 0.4046357816004961 1.6997082585724705 0.07547248078929703 0.016318179896709382 7.214498006481437e-12 11.141793882255822 0.18695602695687397 GS(ph)GLAGPK ddPTM_A549_PD325901_60min_R1 2 GSGLAGPK 8 0 Q9Y6W5 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 1 GS(1)GLAGPK;GS(1)GLAGPK 105.2 0.0020029 54736000.0 20426.0 22417.9 22247.9 22929.5 25179.0 23148.3 22105.2 23743.9 25368.0 25142.0 25124.6 True False 22499.632483173547 24307.135108626895 23757.776281490875 24345.8031383272 23410.51390283439 22959.787919594408 22946.425482429582 23270.3092877708 24301.871179596314 23554.529829239447 22034.433477961706 1.0211123651387326 1.1031431841866182 1.0782113506686166 1.1048980752183744 1.0624513639639979 1.04199583540726 1.0413894010653837 1.0560883859821124 1.1029042885945963 1.0689873126440081 1.0 14.427472183855198 -6.995175510871391 23.99753494102997 1.0494524595214785 1.0794249344131965 0.12035675117509159 0.030840010528528635 152.49122451654222 758490.0724725601 0.005861411928531923 0.011045214919566029 1.0111707285482528e-07 6.995175510871391 0.02997247489171806 GS(ph)GSDDTELR ddPTM_A549_PD325901_60min_R1 1 GSGSDDTELR 10 0 P39880-9;Q13948-9;Q13948-10;Q13948-2;Q13948 P39880-9 CUX1 Homeobox protein cut-like 1;Protein CASP 1 GS(0.907)GS(0.092)DDTELR 51.927 0.024197999999999997 758530.0 258.12 250.3 108.44 167.23 343.02 352.94 221.6 210.05 305.14 174.77 302.4 True False 284.32415238209916 271.3936594279262 115.79939050269333 177.5594172931139 318.92745855475823 350.06577365688423 230.03310926417294 205.86038796896275 292.31602695293384 163.73499237356518 265.20671707154037 1.0720850343522852 1.0233287543569904 0.4366382261406149 0.6695132734711869 1.2025617679537375 1.3199732552869423 0.8673728622119354 0.7762261463137499 1.102219544741322 0.6173862946668773 1.0 8.050973505809985 -6.756273283323894 24.99415636615964 1.0442678112547565 0.7903330646311931 0.0819947638189058 0.24589784966474199 147.45305875572487 713386.0475329857 0.030815085317514052 0.06265505313434289 1.7527772054814256e-07 6.756273283323894 -0.2539347466235634 GS(ph)GSPEDTPR ddPTM_A549_PD325901_60min_R1 1 GSGSPEDTPR 10 0 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 GS(0.499)GS(0.499)PEDT(0.002)PR 47.894 0.032253 18239000.0 124.26 196.6 0.0 203.75 223.71 184.32 197.01 209.21 186.1 147.19 264.94 True False 136.87478372462283 213.16817196775997 0.0 216.33517475017615 207.997381357603 182.81895903110126 204.5073233580086 205.03714242793 178.27886418018278 137.89639828039748 232.3540595930354 0.5890785121824724 0.9174282228643682 0.0 0.9310582958140862 0.8951742944448969 0.7868119857742356 0.880153863961749 0.8824340869578498 0.767272431101206 0.5934753131575188 1.0 7.860181041008456 GS(ph)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_A549_MK2206_60min_R1 4 GSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 33 2 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 1 GS(0.985)IDREDGS(0.015)LQGPIGNQHIYQPVGKPDPAAPPK;GS(0.997)IDREDGS(0.003)LQGPIGNQHIYQPVGKPDPAAPPK;GS(0.998)IDREDGS(0.002)LQGPIGNQHIYQPVGKPDPAAPPK;GS(0.999)IDREDGS(0.001)LQGPIGNQHIYQPVGKPDPAAPPK 180.9 2.0609999999999996e-76 57154100.0 5686.599999999999 5413.4 5712.5 4425.05 7687.8 5928.799999999999 5107.01 5533.7 8460.8 6950.900000000001 8220.2 True False 6646.3590559782415 5688.9189374991165 6522.618398218733 5509.187448648042 6556.934803967083 6556.181680781072 6034.887610791813 6318.118921245501 6544.442309121267 5380.686862390292 6178.897474021455 1.0756545296182984 0.9207013000972417 1.0556281967199517 0.8916133455540991 1.0611820039958662 1.061060117657862 0.9766932751619335 1.0225317619865661 1.0591602040067354 0.8708166602557886 1.0 12.593133719771886 GS(ph)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_A549_PD325901_60min_R1 3 GSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 33 2 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 1 GS(0.99)IDREDGS(0.01)LQGPIGNQHIYQPVGKPDPAAPPK;GS(0.994)IDREDGS(0.006)LQGPIGNQHIYQPVGKPDPAAPPK;GS(0.997)IDREDGS(0.003)LQGPIGNQHIYQPVGKPDPAAPPK 198.52 1.0965999999999998e-88 84749000.0 5538.4 6154.8 6274.6 6621.6 7566.0 6164.9 6629.799999999999 6660.0 7159.700000000001 7403.0 8134.4 True False 6100.65429084541 6673.486596272478 6700.43208823497 7030.601193255292 7034.590261283016 6114.695098366079 6882.100666965761 6527.161075331075 6858.8027075274285 6935.573316596119 7133.920368210114 0.8551615347475559 0.9354585209572281 0.9392356155380095 0.9855171953677492 0.986076364495218 0.8571297102802177 0.9647010776337648 0.9149472854248759 0.9614352773113849 0.9721966266265235 1.0 12.800479396593872 -14.999999999869372 0.07559922704647663 1.23319565535134 0.8618227939289664 0.2108574095646607 0.041943591160322584 160.6201487075269 0.9026709904264197 6.297238439812274 0.7291336621578348 1.0000000003007819e-15 14.999999999869372 -0.37137286142237347 GS(ph)ITEYTAAEEK ddPTM_A549_MK2206_60min_R1 2 GSITEYTAAEEK 12 0 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 GS(0.831)IT(0.163)EYT(0.006)AAEEK;GS(0.942)IT(0.058)EYTAAEEK 119.25 1.9437e-13 1094800.0 1934.6 1635.0 1060.1 1386.9 1806.6 1547.7 1787.2 1663.0 2080.7 1866.5 1763.7 True False 2261.113183571117 1718.2145163503624 1210.4381206042335 1726.690562260306 1540.8515331885485 1711.476586719888 2111.9111061084914 1898.7353427239045 1609.4247721951378 1444.8563536594522 1325.724614356298 1.7055677771125903 1.2960568867348343 0.9130388826581142 1.3024504060360198 1.1622711960709162 1.2909744363092261 1.5930239834416322 1.43222455264273 1.213996296641584 1.0898616032417852 1.0 10.372565407952798 -9.735754558600004 1.0349662394719432 1.0363538528121568 1.3157580336607837 0.2228049486983701 0.20067856193562064 0.4783187106022975 1.0555903819675145 0.06356831008250667 0.04060062143485594 1.8375765558034546e-10 9.735754558600004 0.27940418084862695 GS(ph)KSPAKVSDGGSSSTDFK ddPTM_A549_PD325901_60min_R1 3 GSKSPAKVSDGGSSSTDFK 19 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659;A0A087X146 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GS(0.553)KS(0.441)PAKVS(0.003)DGGS(0.001)S(0.001)S(0.001)T(0.001)DFK;GS(0.499)KS(0.499)PAKVS(0.001)DGGSSSTDFK;GS(0.499)KS(0.499)PAKVS(0.001)DGGSSSTDFK 53.342 0.0039201999999999996 11209200.0 3930.63 3943.5299999999997 4774.3099999999995 4776.58 4866.1 7353.300000000001 6348.5 6745.2 6099.400000000001 5240.7 6002.73 True False 4329.664664023132 4275.865112919737 5098.323386858298 5071.618498199737 4524.321923133661 7293.417162778842 6590.095641532496 6610.661694492965 5843.0634292348595 4909.801307616544 5264.43226444063 0.8224371492570013 0.8122177089829204 0.9684469532062672 0.9633742526153709 0.8594130754979693 1.3854138103444287 1.2518150696032793 1.255721673758752 1.1099133079748555 0.9326364289612972 1.0 12.362062238811435 GS(ph)KSPDLLMYQGPPDTAEIIK ddPTM_A549_MK2206_60min_R1 4 GSKSPDLLMYQGPPDTAEIIK 21 1 P82909 P82909 MRPS36 28S ribosomal protein S36, mitochondrial 1 GS(0.542)KS(0.457)PDLLMY(0.001)QGPPDTAEIIK;GS(0.575)KS(0.424)PDLLMY(0.001)QGPPDTAEIIK;GS(0.5)KS(0.5)PDLLMYQGPPDTAEIIK;GS(0.566)KS(0.434)PDLLMYQGPPDTAEIIK 117.36 3.4494e-15 26897800.0 4086.9099999999994 5334.34 4986.9 3838.69 5713.2 5673.72 4294.6900000000005 4046.2799999999997 7009.499999999999 6558.18 6025.35 True False 4776.680492643769 5605.835121191675 5694.117407453304 4779.169222325345 4872.795848230278 6274.109284489476 5074.979581632206 4619.852581212799 5421.8594418713965 5076.682583146176 4529.089303799806 1.0546668816259022 1.2377400278878368 1.2572323099648455 1.0552163805460244 1.0758886657726334 1.3852915815163187 1.1205298110095578 1.0200400723688192 1.1971191288550165 1.1209058251262458 1.0 12.145005271141942 -11.020205748596972 0.6928441685249226 0.9679922783160041 1.1629073647097803 0.056560128112359775 0.10958615920657694 1.3345587180172203 0.8164820985650398 0.16552093279926625 0.019809277612807527 9.545402619494475e-12 11.020205748596972 0.1949150863937762 GS(ph)KSPDLLMYQGPPDTAEIIK ddPTM_A549_PD325901_60min_R1 4 GSKSPDLLMYQGPPDTAEIIK 21 1 P82909 P82909 MRPS36 28S ribosomal protein S36, mitochondrial 1 GS(0.5)KS(0.5)PDLLMY(0.001)QGPPDTAEIIK;GS(0.5)KS(0.5)PDLLMYQGPPDTAEIIK;GS(0.496)KS(0.496)PDLLMY(0.007)QGPPDTAEIIK;GS(0.564)KS(0.436)PDLLMYQGPPDTAEIIK 115.83 3.2563e-15 47846900.0 11110.9 11026.8 10938.2 11963.300000000001 12193.2 12536.3 12296.199999999999 13038.2 11165.6 12786.499999999998 12967.399999999998 True False 12238.870388587737 11956.067134557969 11680.53202873995 12702.2458703744 11336.791696256427 12434.208529197016 12764.138619738813 12778.142872729977 10696.348661419934 11979.158207842263 11372.492007121333 1.0761819292485664 1.0513146219026759 1.0270864135517286 1.1169272189789528 0.9968608189970544 1.0933583001342932 1.1223695397408102 1.1236009543667687 0.9405457180996034 1.0533450540427765 1.0 13.473260800216346 -8.767557370996817 24.99999263209699 0.9719243639159325 1.0743672113209644 0.3178349859155922 0.04678756404045662 79.6619784148814 325522.7497427585 0.00738991080614291 0.007962290848855295 1.707822099122296e-09 8.767557370996817 0.10244284740503184 GS(ph)LAS(ph)LDSLR ddPTM_A549_PD325901_60min_R1 1 GSLASLDSLR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 2 GS(0.948)LAS(0.882)LDS(0.17)LR 53.568999999999996 0.024093 1676200.0 400.73 553.45 403.91 433.03 594.99 386.33 422.92 419.64 571.53 542.29 443.78 True False 441.4118145981661 600.0911738329438 431.3217615081415 459.7772796175153 553.1999550040689 383.18385656730305 439.0144520307037 411.2699509987887 547.5105816491123 508.0497168522093 389.1978733532017 1.134157827726822 1.5418665283619213 1.1082325753530309 1.1813458168623185 1.4213848350143305 0.9845476627760479 1.127998075242032 1.0567117118483234 1.4067666324379935 1.305376394981347 1.0 8.604360016771519 -11.121377932945391 1.48166224734566 1.0002490473428072 1.2411177951536134 0.0 0.1863801848792192 0.5079516629986861 1.9991637145225618 0.11930276157289835 0.02588844635766102 7.561745682925101e-12 11.121377932945391 0.24086874781080625 GS(ph)LASLDSLR ddPTM_A549_MK2206_60min_R1 1 GSLASLDSLR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GS(0.77)LAS(0.226)LDS(0.004)LR 95.477 0.00055645 22002000.0 808.22 917.33 747.09 871.1 1295.9 931.7 999.93 1078.9 1163.9 1167.4 1217.6 True False 944.6277769181476 964.0181787667752 853.0385959081373 1084.5195391051657 1105.27482666835 1030.2918755875935 1181.6043376964324 1231.8373789926768 900.2785083663778 903.6835292054883 915.2363159495544 1.0321135213456862 1.0532997456144535 0.932041901137973 1.1849612173441573 1.2076387348349822 1.1257113137153756 1.291037426187052 1.3459227497049764 0.9836568902233103 0.9873772636173422 1.0 9.83800048817693 GS(ph)LASLDSLR ddPTM_A549_PD325901_60min_R1 2 GSLASLDSLR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GS(0.814)LAS(0.186)LDSLR;GS(0.985)LAS(0.015)LDSLR 174.87 1.0937e-10 57033000.0 5010.3 5011.4 5153.0 5074.200000000001 5970.1 4800.1 5034.5 4561.200000000001 4585.2 5556.7 5376.2 True False 5518.941967612087 5433.728265509827 5502.713567506263 5387.621809655675 5550.780771726901 4761.0095770680855 5226.0906524841075 4470.223287807822 4392.499989462514 5205.849013687645 4714.961482539732 1.1705168723116033 1.1524438292087444 1.167074977787985 1.1426650736399255 1.1772695900660786 1.009766377667957 1.1084057996734797 0.94809327803881 0.9316088807360686 1.1041127341051988 1.0 12.203030269947211 -7.666275548102918 1.136013760664146 0.9663747347830185 1.163474190976029 0.5632087783032877 0.058593094622909875 0.14437770544245088 0.3760706173870151 0.0075262459463742454 0.01309541935751233 2.1563758128975863e-08 7.666275548102918 0.1970994561930106 GS(ph)LASLDSLRK ddPTM_A549_MK2206_60min_R1 3 GSLASLDSLRK 11 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GS(0.924)LAS(0.076)LDSLRK;GS(0.86)LAS(0.106)LDS(0.034)LRK;GS(0.5)LAS(0.5)LDSLRK 148.18 1.1925999999999997e-11 86636300.0 5891.6 6696.7 6431.4 5759.299999999999 8752.3 6118.6 6578.000000000001 6091.299999999999 9077.2 8520.5 9279.199999999999 True False 6885.9580442094475 7037.5334260816335 7343.469228237019 7170.328758544804 7464.848264101703 6766.066190802029 7773.1374529888435 6954.760428823884 7021.2286933098 6595.713132255752 6974.91854710833 0.9872456570929041 1.0089771484140502 1.052839424380301 1.0280161280904832 1.0702416399108328 0.9700566601752092 1.1144413229329309 0.9971099134494117 1.0066395250193523 0.9456329973903724 1.0 12.76796065395244 GS(ph)LASLDSLRK ddPTM_A549_PD325901_60min_R1 2 GSLASLDSLRK 11 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GS(0.74)LAS(0.186)LDS(0.074)LRK;GS(0.918)LAS(0.081)LDS(0.001)LRK 94.68799999999999 0.00011999999999999999 224490000.0 2996.7 3037.3 3022.7 3468.8 3666.1000000000004 3498.7 3261.1000000000004 3801.8999999999996 3740.8 3821.6 3919.5 True False 3300.9227779460566 3293.2639304052777 3227.838598971702 3683.059897783612 3408.605783358402 3470.207747190288 3385.2029450423934 3726.0681219671483 3583.587184982416 3580.303523801666 3437.4263477576137 0.9602890197485673 0.958060943634071 0.9390277121362512 1.0714585638136613 0.9916156561672913 1.009536611440143 0.984807411873919 1.0839703152906326 1.0425204273307993 1.0415651599741933 1.0 11.747113086517452 -6.242099320167618 24.878202158518523 1.0224904179772774 0.9530193897602998 0.5441324772802898 0.0305459689106975 492.52164753945664 633557.0631283665 0.004292565366556553 0.01133684261724763 5.7266505144205e-07 6.242099320167618 -0.06947102821697759 GS(ph)LDESSLGFGYPK ddPTM_A549_MK2206_60min_R1 1 GSLDESSLGFGYPK 14 0 Q2KJU6;Q9BUZ4 Q2KJU6 TRAF4 TNF receptor-associated factor 4 1 GS(1)LDESSLGFGYPK 201.95 1.6243999999999998e-31 9006900.0 1506.0 1350.2 1362.1 1446.6 2117.3 1567.6 1564.9 1639.0 2226.5 2098.2 2019.5 True False 1760.1759818350574 1418.9194128295162 1555.2662617441988 1801.0170649403408 1805.8479747703498 1733.4823915113363 1849.2220736062982 1871.3332692269867 1722.201304989896 1624.2151627368128 1518.0024146354494 1.159534375482378 0.9347280341252104 1.0245479498250325 1.186438867011195 1.1896212794918557 1.1419496930956035 1.2181944216804106 1.232760403530972 1.1345181591186633 1.069968760969903 1.0 10.567958370263831 -4.329919792607903 13.749186777782612 1.0972486015923169 1.1055892338233202 0.0 0.0946983151864963 0.0 0.0 0.014029275222379243 0.0 4.678215326229009e-05 4.329919792607903 0.008340632231003342 GS(ph)LDESSLGFGYPK ddPTM_A549_PD325901_60min_R1 2 GSLDESSLGFGYPK 14 0 Q2KJU6;Q9BUZ4 Q2KJU6 TRAF4 TNF receptor-associated factor 4 1 GS(0.894)LDES(0.096)S(0.009)LGFGYPK;GS(1)LDESSLGFGYPK 148.52 2.7919e-13 30433000.0 5247.299999999999 5238.4 5073.6 5290.5 5937.7 6060.7 5436.4 5573.2 5166.9 5516.700000000001 6241.5 True False 5780.002033141905 5679.858352166399 5417.925006035272 5617.282169402735 5520.65643595297 6011.3436686186815 5643.285176912227 5462.0381539091795 4949.753161378757 5168.374620514091 5473.83506812837 1.0559328078400105 1.037637831880907 0.9897859432377427 1.0262059597136186 1.0085536679936193 1.0981959802954198 1.030956378238447 0.9978448539146021 0.9042569057659224 0.9441962638967996 1.0 12.41833625024219 -8.518321461265428 5.200402035215258 0.954485260835339 1.033688932779762 0.5621000000243475 0.03308678807715241 0.1273157818026615 10.58255080916477 0.00708511609535788 0.008288292885132015 3.0316463533657095e-09 8.518321461265428 0.07920367194442302 GS(ph)LGKDTTSPMELAALEK ddPTM_A549_MK2206_60min_R1 1 GSLGKDTTSPMELAALEK 18 1 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 GS(0.916)LGKDT(0.028)T(0.028)S(0.028)PMELAALEK 64.203 0.00069734 850720.0 600.18 679.61 792.32 736.19 863.53 889.22 718.68 1033.6 1384.1 1508.6 1008.3 True False 701.4757110078123 714.199246150991 904.6828900265506 916.5565830488246 736.5058809112735 983.3166701835352 849.2548532553991 1180.1159652672447 1070.60355995352 1167.8062122317965 757.9112823356887 0.9255380245113168 0.9423256557812566 1.1936527547637887 1.2093190910474794 0.971757378570155 1.2974033941719467 1.1205201361275594 1.5570634621382455 1.4125710817421713 1.5408217814529908 1.0 9.56588517270254 -7.265631350762658 24.741296937307617 1.229767167834624 1.0596153451936532 0.2824207010441725 0.1874293831680762 497.05430876793696 2933646.7254137974 0.03055335196698573 0.04990933871536564 5.424611611405821e-08 7.265631350762658 -0.17015182264097084 GS(ph)LTLTISGESPK ddPTM_A549_MK2206_60min_R1 2 GSLTLTISGESPK 13 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.996)LT(0.004)LTISGESPK;GS(0.999)LT(0.001)LTISGESPK 151.44 5.4476e-13 3815200.0 2804.1 3527.4 3054.6 3144.8999999999996 4274.3 2947.1 3291.1000000000004 3462.5 4790.3 4449.5 5084.2 True False 3277.363526337109 3706.929593256434 3487.7882116759647 3915.400641179928 3645.556132130972 3258.9601658733463 3889.0502693115805 3953.3199784615254 3705.3046985372084 3444.354859688043 3821.6528232184 0.8575775136939523 0.9699807294726076 0.9126386861951339 1.0245306997516792 0.9539213269144818 0.8527619636387633 1.0176356799559887 1.0344529347205962 0.9695555483286393 0.9012736161594563 1.0 11.899981007778312 GS(ph)LTLTISGESPK ddPTM_A549_PD325901_60min_R1 2 GSLTLTISGESPK 13 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.999)LT(0.001)LTISGESPK;GS(0.998)LT(0.002)LTISGESPK 129.77 4.5663e-08 5524300.0 5128.4 5893.8 5205.1 5293.1 6435.1 5435.1 5523.6 5865.7 6639.6 5894.3 6920.299999999999 True False 5649.031392671458 6390.491210292897 5558.349386809012 5620.042765497708 5983.120775889814 5390.838347601661 5733.803620629898 5748.70401194737 6360.560701830963 5522.13289207247 6069.1469713961 0.9307784799569615 1.0529471835846609 0.9158370052670536 0.9260020876055531 0.9858256529440254 0.8882365797053015 0.9447462135376397 0.9472013182480211 1.0480155995246607 0.9098696930719081 1.0 12.567278042227363 -8.749988524452712 24.6395411531828 1.0226740326004744 0.9496105975882186 0.0 0.053699511039870446 137.3898421587113 295630.188531857 0.007109675276531676 0.008026333812356295 1.7783263988907755e-09 8.749988524452712 -0.07306343501225576 GS(ph)LTQR ddPTM_A549_MK2206_60min_R1 1 GSLTQR 6 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 GS(0.659)LT(0.341)QR 89.698 0.037883 123000000.0 4513.0 4530.7 3969.4 3416.7 5133.6 4020.4 3890.2 4356.1 4797.8 5887.5 5735.8 True False 5274.684067743435 4761.293277815648 4532.320607420472 4253.791653381491 4378.454240438797 4445.836059474471 4596.998984435572 4973.590514996757 3711.1059605122473 4557.509660953666 4311.442559973267 1.2234151317966626 1.1043387941703602 1.0512306598950896 0.9866283950696695 1.0155427515346385 1.0311713533537223 1.0662322228558407 1.1535792129462106 0.8607573703904936 1.0570730324149151 1.0 12.073954944211287 -2.0000000000097984 0.3029082284641351 0.95043170641552 3.1283112098986745 0.20343340359449735 0.07980081128676066 34.429034440263436 0.4305788392990374 0.02881785617202926 41.45830903370824 0.009999999999774384 2.0000000000097984 2.1778795034831546 GS(ph)LTQR ddPTM_A549_PD325901_60min_R1 2 GSLTQR 6 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 GS(0.958)LT(0.042)QR;GS(0.982)LT(0.018)QR 91.78299999999999 0.022558 160480000.0 4301.1 3833.2 4635.4 4790.0 4920.4 3874.9 3396.0 4167.9 4378.2 5185.7 5406.4 True False 4737.744505697528 4156.237216616568 4949.986118924613 5085.867421120709 4574.808078458495 3843.344099119 3525.236638362505 4084.767964845704 4194.199479600627 4858.274017002898 4741.4470739933095 0.9992191058472234 0.8765756849661784 1.0439821517939394 1.0726403441296508 0.9648548232355426 0.8105846251452692 0.7434938286453346 0.8615023854743692 0.8845821569127452 1.0246395121966838 1.0 12.211111716752715 -7.009641501236119 24.73618960383903 0.9109931391692466 0.9959565567560595 0.24224198592856183 0.08768320072198432 633.5821681366282 1625521.6308883808 0.014259834083536586 0.025897149620384405 9.780442378250299e-08 7.009641501236119 0.08496341758681292 GS(ph)NRSSLMDTADGVPVSSR ddPTM_A549_MK2206_60min_R1 1 GSNRSSLMDTADGVPVSSR 19 1 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 GS(0.545)NRS(0.227)S(0.227)LMDTADGVPVSSR 75.956 0.00012067 5601400.0 1490.8 1273.0 1132.2 1301.4 1369.6 1150.4 1139.5 1110.8 1780.4 1938.3 1493.2 True False 1742.410593439379 1337.7902625773766 1292.7629847638075 1620.2430584220656 1168.1336542981494 1272.134564426283 1346.532400073089 1268.2593016823284 1377.142242714579 1500.4366837921855 1122.397229776506 1.5524010102789823 1.1919044586770406 1.1517873979617939 1.4435558244781943 1.0407488750936693 1.1334085034044437 1.1996932675441594 1.129955837413165 1.2269651119762637 1.3368143149203562 1.0 10.132367637976452 -2.000000065635978 0.02504487340648823 2.3784974847472203e-08 2.8798183183428248 0.05679435431310331 0.15387583347200523 1237.265113659052 2.3174643311350116 90.76328143845387 194.09502845717734 0.00999999848867587 2.000000065635978 2.87981829455785 GS(ph)PAT(ph)SPHLGR ddPTM_A549_MK2206_60min_R1 3 GSPATSPHLGR 11 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 2 GS(0.993)PAT(0.552)S(0.455)PHLGR;GS(0.998)PAT(0.591)S(0.411)PHLGR;GS(0.996)PAT(0.637)S(0.367)PHLGR 67.964 0.0062204999999999995 15809400.0 1079.75 947.0799999999999 898.4300000000001 979.3 1045.93 952.1700000000001 1260.7399999999998 897.9300000000001 1531.15 1361.18 1376.55 True False 1261.9854026470136 995.2823266942522 1025.8408835906625 1219.2285439624468 892.0750825350932 1052.9279974007081 1489.8001387171096 1025.2143272952953 1184.3469697441176 1053.6884926194336 1034.7146441527261 1.219645831610306 0.9618906355667142 0.9914239538290001 1.1783234642057372 0.8621459912414471 1.0176022958125774 1.439817390365659 0.9908184184778692 1.1446121657183248 1.0183372764403507 1.0 10.015017237673899 -6.1596441878315735 16.13898859455127 1.0784483752691612 1.048122816382177 0.0034755185220850526 0.15164423594505644 16.058306903472126 2520.440623214543 0.020410483186287222 0.05400440457834333 6.923980118426973e-07 6.1596441878315735 -0.030325558886984183 GS(ph)PAT(ph)SPHLGR ddPTM_A549_PD325901_60min_R1 2 GSPATSPHLGR 11 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 2 GS(0.999)PAT(0.631)S(0.37)PHLGR;GS(1)PAT(0.862)S(0.138)PHLGR 80.623 0.0013093 11630500.0 2211.3 2243.8 2464.3 1996.6100000000001 1988.12 2020.4499999999998 2288.0 2366.0 2247.7200000000003 2253.3 2984.5 True False 2435.7895481269793 2432.8929006167846 2631.5422170397205 2119.936065069691 1848.4813098416585 2003.9961250780634 2375.07109204164 2318.8082739089077 2153.256145056853 2111.0262534494163 2617.425420304273 0.9306051393983258 0.9294984612527999 1.0053933902475076 0.8099317935191638 0.7062211956460538 0.7656363805181892 0.9074073605373407 0.885911879636039 0.8226618907088246 0.8065277570369176 1.0 11.353932714926078 -10.851037574438456 0.9973512632233527 1.003447298489838 0.8591559605160222 0.0 0.0979821274339947 0.6476479216105329 1.097742441373162 0.06867513679661377 0.015205553675729757 1.4091668743662348e-11 10.851037574438456 -0.14429133797381577 GS(ph)PATS(ph)PHLGR ddPTM_A549_MK2206_60min_R1 1 GSPATSPHLGR 11 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 2 GS(0.962)PAT(0.241)S(0.797)PHLGR 62.287 0.0025616999999999997 14305000.0 444.35 330.02 401.43 238.02 454.43 374.55 293.49 382.34 471.72 450.97 579.14 True False 519.3454166855299 346.8166083706096 458.35881025767105 296.33491068512376 387.58394897978087 414.18463239383215 346.8133340039062 436.53786586714244 364.8761731820497 349.0955637877324 435.3235545491334 1.1930101444279033 0.7966869808591202 1.052915252271142 0.6807233552800496 0.8903353492581014 0.9514408950896421 0.7966794591739985 1.0027894454718094 0.8381723648286241 0.8019220649553233 1.0 8.76594427356205 -5.2470582911832615 24.18511858828365 0.9058859159696251 1.1930104592443782 0.3838043678993275 0.10959624823725989 1269.6351083120105 2135128.517687924 0.013884671249414117 0.3974327552457713 5.661632932691352e-06 5.2470582911832615 0.2871245432747531 GS(ph)PATS(ph)PHLGR ddPTM_A549_PD325901_60min_R1 2 GSPATSPHLGR 11 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 2 GS(0.962)PAT(0.241)S(0.797)PHLGR;GS(0.998)PAT(0.093)S(0.909)PHLGR 78.814 0.00035563 29192000.0 1214.15 954.1300000000001 1122.26 1169.37 1186.1499999999999 993.8399999999999 973.03 1123.73 1135.1399999999999 1140.6399999999999 1263.44 True False 1337.4096141900109 1034.537883619526 1198.4233122976082 1241.5993290680422 1102.8389159953545 985.746496546602 1010.0591891124469 1101.3163236008695 1087.4340133556836 1068.6197957371603 1108.0448896060411 1.2069994877784411 0.933660624514364 1.0815656689899094 1.120531614481328 0.9953016582094092 0.8896268606022617 0.9115688349698247 0.9939275330193852 0.9813988797352013 0.9644192268393583 1.0 10.113800614334542 -6.8904169331585905 6.681934641973057 0.9769048806079108 1.0740626708383703 0.41332223070138385 0.06910401725560623 0.20095059443953503 11.203923595976548 0.009612428239269867 0.018287022658486394 1.2870133945731803e-07 6.8904169331585905 0.09715779023045945 GS(ph)PDGSLQTGKPSAPK ddPTM_A549_MK2206_60min_R1 4 GSPDGSLQTGKPSAPK 16 1 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 GS(1)PDGSLQTGKPSAPK;GS(0.997)PDGS(0.003)LQTGKPSAPK;GS(0.995)PDGS(0.005)LQTGKPSAPK;GS(0.977)PDGS(0.023)LQTGKPSAPK 137.19 1.2713999999999999e-10 205079900.0 9764.42 10639.2 10068.020000000002 9058.029999999999 15438.2 12159.8 10891.0 11532.800000000001 15212.6 12941.199999999999 14490.2 True False 11412.415378851178 11180.689836302616 11495.816627682141 11277.247756630413 13167.261230859873 13446.541964978018 12869.753724612565 13167.609717718728 11766.970389530332 10017.773931946253 10891.883430824753 1.0477908115095398 1.0265157451704376 1.0554480040750545 1.0353808712931185 1.2089058163802644 1.23454699551075 1.1815912102208428 1.2089378114765275 1.0803430338070847 0.9197467082318644 1.0 13.410965826842641 -4.112295762276219 12.741669375685412 1.079336071461031 1.0901208990249625 0.0 0.09824979986315774 0.0 0.0 0.01320508039626792 0.0 7.721545549953949e-05 4.112295762276219 0.01078482756393151 GS(ph)PDGSLQTGKPSAPK ddPTM_A549_PD325901_60min_R1 6 GSPDGSLQTGKPSAPK 16 1 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 GS(0.972)PDGS(0.028)LQTGKPSAPK;GS(1)PDGSLQTGKPSAPK;GS(0.918)PDGS(0.082)LQTGKPSAPK;GS(1)PDGSLQTGKPSAPK;GS(0.862)PDGS(0.138)LQTGKPSAPK;GS(1)PDGSLQTGKPSAPK 185.02 3.5792000000000003e-34 330605500.0 38894.5 41914.899999999994 45735.2 45498.399999999994 49066.299999999996 39574.5 44417.9 44526.1 45404.0 48151.8 50534.4 True False 42843.04100738242 45447.21572335435 48839.065700099396 48308.7328336364 45620.0523575457 39252.21839288364 46108.24749090748 43637.99200545026 43495.8277766632 45111.48713036237 44318.9891639552 0.9666971610947035 1.0254569560516227 1.1019896126110293 1.0900233454089263 1.0293567885489738 0.8856749473159828 1.040372272940004 0.9846341901890939 0.9814264403854798 1.017881679644709 1.0 15.43563735604531 -7.012700483127792 24.84331882708039 0.9867551674419014 1.04995800238511 0.26103560009693305 0.04872405908315332 550.5575015283957 1076943.6506068883 0.0067548403648179335 0.012087268620717913 9.711795230009743e-08 7.012700483127792 0.06320283494320866 GS(ph)PDGSLQTGKPSAPKK ddPTM_A549_PD325901_60min_R1 2 GSPDGSLQTGKPSAPKK 17 2 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 GS(0.973)PDGS(0.027)LQTGKPSAPKK;GS(1)PDGSLQTGKPSAPKK 68.82 0.00033909 7787900.0 1303.0 923.06 1340.6 1319.3 1468.4 1582.1 1211.8 1265.4 1581.9 1305.5 1441.2 True False 1435.279600782098 1000.8495056793523 1431.5811776826877 1400.790164652306 1365.264649704994 1569.2159021435832 1257.9157121224036 1240.1606043129034 1515.4182442054337 1223.0705072019769 1263.9415365195232 1.1355585359860734 0.7918479429320447 1.1326324330038149 1.1082713275723326 1.0801643986354632 1.2415257009945924 0.9952325133536535 0.9811851011146413 1.1989622940776155 0.9676638292700692 1.0 10.303714018015702 GS(ph)PEEELPLPAFEK ddPTM_A549_MK2206_60min_R1 2 GSPEEELPLPAFEK 14 0 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK 255.91 8.224799999999998e-70 141170000.0 73210.0 82616.0 77786.0 66806.0 110766.0 86568.0 84795.0 86291.0 124614.0 111044.0 106425.0 True False 85566.0581873469 86820.80151853319 88817.22445931609 83173.47299903519 94472.46813083296 95728.56830081242 100201.1538957416 98523.0135051044 96389.12796766701 85959.08327659262 79996.73531942448 1.0696193769118738 1.0853043086303513 1.1102606138196973 1.0397108415352965 1.1809540446070372 1.1966559375025896 1.2525655390265804 1.2315879280786282 1.2049132703076972 1.074532391020217 1.0 16.287653504117177 -6.756543504783038 24.997695901137526 1.133741126863306 1.0793036037340908 0.18213784436521352 0.07323321047729557 313.884802474312 1602632.5985867665 0.014601406394222027 0.029640732124364744 1.7516869528679395e-07 6.756543504783038 -0.054437523129215126 GS(ph)PGGPEFLK ddPTM_A549_PD325901_60min_R1 2 GSPGGPEFLK 10 0 Q4VC44-2;Q4VC44;I3L188;Q4VC44-4 Q4VC44-2 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 1 GS(1)PGGPEFLK;GS(1)PGGPEFLK 121.68 4.5832e-12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GS(ph)PGGYLGAK ddPTM_A549_MK2206_60min_R1 1 GSPGGYLGAK 10 0 O60551 O60551 NMT2 Glycylpeptide N-tetradecanoyltransferase 2 1 GS(0.999)PGGY(0.001)LGAK 72.887 0.0019166 9502400.0 3756.8 4049.1 3812.5 4464.9 5093.8 4451.3 4338.5 4132.4 5945.2 5213.8 5196.4 True False 4390.855995058398 4255.181894895568 4353.169828132855 5558.80070043698 4344.50876771606 4922.333611466195 5126.749291546382 4718.180354944236 4598.621692533537 4035.9989588586363 3905.99046665593 1.1241338227887636 1.0893989453432011 1.1144855230176158 1.4231475339969493 1.1122681442270805 1.2602011329741918 1.3125350241665057 1.2079344266765846 1.177325375417671 1.0332843854363043 1.0 11.931472712707837 -10.244582498411976 0.7651588388292361 1.0047860082854618 1.2061192411280137 0.35742377675172876 0.09564912764313382 0.5109060561619547 0.5701163402672927 0.05525660398894656 0.019457622597562823 5.694000508403299e-11 10.244582498411976 0.2013332328425519 GS(ph)PGVSQR ddPTM_A549_MK2206_60min_R1 2 GSPGVSQR 8 0 H0YA01;H7C380;H7C0Z7;C9JIE2;H0Y8P0;Q86TI0-2;Q86TI0 H0YA01 TBC1D1 TBC1 domain family member 1 1 GS(1)PGVSQR;GS(1)PGVSQR 103.01 0.0021735 13069600.0 1995.47 1799.27 2019.8899999999999 1681.8400000000001 1865.02 1866.42 1934.79 2143.26 2192.44 2718.6000000000004 2756.9 True False 2332.256551442498 1890.845157696463 2306.340774858301 2093.890875500666 1590.6780285770537 2063.923325570675 2286.316298672587 2447.0736684584695 1695.8558406072507 2104.466371850301 2072.2856434307864 1.125451290383557 0.9124442683326521 1.1129454002489845 1.0104257982669371 0.7675959313908077 0.9959646886100764 1.1032824098937735 1.180857318688557 0.8183504267296207 1.0155290987618086 1.0 11.017007162183713 -8.788433096217936 24.999991882405368 0.9142210653918743 1.0176521339965048 0.0668257329169486 0.11893540573495502 341.82423254140207 316575.9302102835 0.021811016297296378 0.023222672199381837 1.627672041895081e-09 8.788433096217936 0.10343106860463047 GS(ph)PGVSQR ddPTM_A549_PD325901_60min_R1 2 GSPGVSQR 8 0 H0YA01;H7C380;H7C0Z7;C9JIE2;H0Y8P0;Q86TI0-2;Q86TI0 H0YA01 TBC1D1 TBC1 domain family member 1 1 GS(1)PGVSQR;GS(1)PGVSQR 101.46 0.002294 17194300.0 3217.8 3524.4 3498.1 2931.6 3890.3999999999996 3064.0 2693.3999999999996 3141.0 3459.7999999999997 3389.0 3637.2000000000003 True False 3544.4686871808385 3821.4135568828765 3735.502101784135 3112.678273853334 3617.1517251513937 3039.047799865962 2795.898810885032 3078.350290933169 3314.396637778592 3175.0179616296414 3189.847458110471 1.1111718455905193 1.197992570825477 1.1710597923064592 0.975807876310534 1.1339575865781493 0.9527251192338093 0.876499220605741 0.9650462385297421 1.0390454970978138 0.9953510327137668 1.0 11.639271719094397 -6.2562351734835495 24.64731352729706 1.006127771428164 1.1638665342094232 0.5771973620081688 0.06312554736047675 207.9866224978434 985027.2624361204 0.00904625019203046 0.023169314788778532 5.543254605772555e-07 6.2562351734835495 0.1577387627812592 GS(ph)PHS(ph)EGGKRSPEPNK ddPTM_A549_MK2206_60min_R1 1 GSPHSEGGKRSPEPNK 16 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 2 GS(1)PHS(0.626)EGGKRS(0.375)PEPNK 46.027 0.010568000000000001 10621000.0 561.61 755.22 796.78 663.62 1029.4 494.04 512.88 523.55 1206.1 1088.0 1051.1 True False 656.3960379537762 793.6574721945696 909.7753850910681 826.2069297910334 877.9766236379342 546.3189848827896 606.063657173748 597.7648158046304 932.9202757459298 842.2200443511829 790.0828611157822 0.8307939208133069 1.0045243496026977 1.1514936342325564 1.0457218735566995 1.1112462589025478 0.6914704922357879 0.767088728285846 0.7565849675063783 1.1807878915743442 1.0659895130009158 1.0 9.625860155788466 -8.77986256000439 24.99663480184968 1.0853720485820992 0.9282772255562811 0.1913009102591008 0.1479308362094185 330.690718487062 448680.4363021998 0.02888647433203309 0.0307795704490263 1.6601121955143648e-09 8.77986256000439 -0.15709482302581812 GS(ph)PHS(ph)EGGKRSPEPNK ddPTM_A549_PD325901_60min_R1 2 GSPHSEGGKRSPEPNK 16 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 2 GS(0.999)PHS(0.558)EGGKRS(0.443)PEPNK;GS(0.997)PHS(0.686)EGGKRS(0.317)PEPNK 61.276 0.0012549000000000002 52573000.0 7637.3 8428.3 8089.5 7939.1 8783.3 6987.9 7549.4 7228.6 8088.9 8524.1 9047.3 True False 8412.633073716894 9138.582420121418 8638.502116115253 8429.480175995699 8166.391308740039 6930.9928592308615 7836.696548190193 7084.419902272999 7748.951662907473 7985.886871267989 7934.539455560013 1.0602547407867338 1.151747051143301 1.0887213006499008 1.0623780023034435 1.0292205810404735 0.8735217586414633 0.9876687351650564 0.8928583620954452 0.9766101367707621 1.0064713794663904 1.0 12.95393077181052 -6.772492845745098 2.434033133186027 0.9730710007733576 1.101328704173353 0.6343336103514496 0.0468287045823445 0.14914796334257951 1.8038303081879785 0.0068856380641951 0.015123586747404865 1.6885236747820935e-07 6.772492845745098 0.12825770339999543 GS(ph)PHSDLK ddPTM_A549_MK2206_60min_R1 1 GSPHSDLK 8 0 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 GS(0.997)PHS(0.003)DLK 77.37899999999999 0.0044779 7430500.0 2322.8 2749.6 2233.0 2089.7 3897.6 3138.0 2701.2 3415.3 4271.5 4271.6 4175.1 True False 2714.8318529923454 2889.5428955088414 2549.6729773693537 2601.676593810198 3324.2682031195013 3470.061077164184 3191.973075100861 3899.4292339175886 3304.012070183847 3306.642593244958 3138.307443101991 0.8650624268694751 0.9207328943695638 0.8124356914022374 0.829006284750301 1.0592551123142038 1.1057110050805854 1.017100183131142 1.2425262038901081 1.0528006354017594 1.0536388334141602 1.0 11.615770976965532 -6.765032365180486 24.99981844792761 1.0497985928121198 0.858205734006697 0.697787564490699 0.06798166906121673 46.798411260432175 325624.4107552907 0.01055250209533844 0.020512650537329483 1.717780367241137e-07 6.765032365180486 -0.19159285880542287 GS(ph)PHSDLK ddPTM_A549_PD325901_60min_R1 1 GSPHSDLK 8 0 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 GS(0.896)PHS(0.104)DLK 43.308 0.04451 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GS(ph)PHSDLKER ddPTM_A549_MK2206_60min_R1 2 GSPHSDLKER 10 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 GS(1)PHSDLKER;GS(1)PHSDLKER 94.74700000000001 0.00015942 31274000.0 5662.8 6805.2 5611.8 5934.9 8838.5 6650.0 6160.5 5819.4 9646.4 10557.400000000001 9576.3 True False 6618.542197832376 7151.555612640664 6407.637624004184 7388.950766427785 7538.368358290149 7353.698586087258 7279.783107196376 6644.31777116506 7461.505802135425 8172.4760075672575 7198.24041756547 0.9194666771175788 0.9935144143267451 0.8901672148054375 1.0264940232333635 1.0472515394032524 1.0215966902331342 1.0113281420042488 0.9230474929610988 1.0365735748319163 1.1353435747470193 1.0 12.813428573009347 -6.280938692823141 24.8645787935792 1.0134053921418922 0.9402959293741587 0.3517788563727844 0.053015590629816325 510.5887261457845 651077.4179746503 0.005278933843172719 0.012282800451680289 5.236743558542292e-07 6.280938692823141 -0.07310946276773345 GS(ph)PHSDLKER ddPTM_A549_PD325901_60min_R1 2 GSPHSDLKER 10 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 GS(0.999)PHS(0.001)DLKER;GS(0.999)PHS(0.001)DLKER 109.15 6.1668e-05 74665000.0 10572.5 13065.5 11693.7 12006.0 14343.099999999999 13718.1 12417.5 13667.0 12442.9 11378.2 12509.6 True False 11645.812416936857 14166.575538376243 12487.304801930517 12747.583352395653 13335.690137008783 13606.384341821551 12890.05475761673 13394.400963445913 11919.968184350331 10659.778510184242 10970.998504888039 1.061508887431546 1.2912749493188282 1.138210418711378 1.161934654053236 1.2155402382989275 1.2402138543505714 1.1749208380507636 1.2208916952707765 1.0864980228590393 0.971632482260832 1.0 13.421407215454124 -9.142389446482063 1.2649532237794818 1.0242608915833709 1.1920805730559714 0.6003949335998422 0.061408446181519805 0.18109707457889074 0.5984690888480831 0.012598557023337857 0.011420086754668369 7.204611276767587e-10 9.142389446482063 0.1678196814726005 GS(ph)PHSVINIFTK ddPTM_A549_PD325901_60min_R1 2 GSPHSVINIFTK 12 0 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 GS(0.982)PHS(0.018)VINIFTK;GS(0.993)PHS(0.007)VINIFTK 83.69200000000001 0.00016715 2973200.0 1444.54 1215.98 1670.8200000000002 1479.0 1417.67 1808.33 1667.17 1522.9099999999999 1904.5099999999998 1679.5 1413.44 True False 1591.1886373858579 1318.4549020821812 1784.211892656863 1570.3544709472912 1318.0977498959955 1793.6035600299015 1730.615066660429 1492.5343653502166 1824.4700678119286 1573.456083374736 1239.5958405343845 1.283635024702812 1.0636167523067848 1.4393496931126333 1.2668277995111037 1.06332863244182 1.4469260878260826 1.3961123537768312 1.2040491880860067 1.4718265487446356 1.2693299153830864 1.0 10.275654103741703 -11.030217338166851 1.3285008114731482 1.0003337482040764 1.3086550911799018 0.03615576960624978 0.1563510999597092 0.36125280900678064 1.1380707441809064 0.0992662777425336 0.0224269440542994 9.327873802089413e-12 11.030217338166851 0.30832134297582536 GS(ph)PHY(ph)FSPFRPY ddPTM_A549_MK2206_60min_R1 1 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(0.994)PHY(0.634)FS(0.372)PFRPY 85.45700000000001 0.0035426000000000003 70200000.0 434.74 600.37 429.53 322.7 849.13 795.53 764.75 808.58 1093.7 634.58 713.53 True False 508.11348362747174 630.9262686123959 490.44381279420486 401.7615144865537 724.2241018357093 879.7124565699243 903.6951759156608 923.1986911723967 845.9786962800126 491.22793726504966 536.3408085738217 0.9473705440736293 1.176353278599265 0.9144256878352011 0.7490787724224707 1.3503057948573522 1.6402116760594043 1.6849271237045476 1.7212911574401075 1.5773155477942202 0.915887677037421 1.0 9.06700621767891 -6.829275273070576 8.89235391710501 1.3779827227978154 0.961365296795416 0.4134800091016121 0.2647866570226798 0.29227059866328 35.24955007575075 0.04463019956035333 0.08457033944919096 1.4815787041137897e-07 6.829275273070576 -0.41661742600239937 GS(ph)PHYFS(ph)PFRPY ddPTM_A549_MK2206_60min_R1 3 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(0.997)PHY(0.155)FS(0.847)PFRPY;GS(1)PHYFS(1)PFRPY;GS(0.99)PHY(0.004)FS(0.996)PFRPY(0.009) 109.44 0.00017265 132447000.0 6982.58 8396.86 7851.56 6048.45 13027.46 11133.89 9275.130000000001 11452.189999999999 15617.900000000001 11174.68 11956.01 True False 8161.068796309321 8824.224308111137 8965.0292710229 7530.320521525234 11111.137891371905 12312.07084972197 10960.301061772627 13075.573003360958 12080.470586661442 8650.312026847685 8987.00274791067 0.9080968399844581 0.9818873495017706 0.997554971606871 0.8379123421627871 1.2363563473879053 1.369986323035711 1.2195724613882772 1.4549425843227668 1.3442157441723217 0.9625358163886998 1.0 13.133624327908661 -6.771779605275257 24.834847207718287 1.2131338250084904 0.9396997722561428 0.49444364868207724 0.14319385734221757 151.36240545552383 363538.33388061204 0.02393575884481703 0.045591946605877176 1.691299010272757e-07 6.771779605275257 -0.27343405275234767 GS(ph)PHYFS(ph)PFRPY ddPTM_A549_PD325901_60min_R1 4 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(0.999)PHYFS(0.999)PFRPY(0.002);GS(0.992)PHY(0.372)FS(0.636)PFRPY;GS(0.987)PHY(0.021)FS(0.992)PFRPY;GS(0.978)PHY(0.007)FS(0.998)PFRPY(0.017) 110.92 4.100899999999999e-05 236739000.0 10986.25 12006.48 13564.59 12043.869999999999 12680.740000000002 10069.61 11383.15 13216.7 12255.849999999999 12244.119999999999 13022.66 True False 12101.566012350213 13018.308206345228 14485.164647906025 12787.792496286644 11790.08856857812 9987.606434728554 11816.342002348683 12953.082550199433 11740.779245366435 11471.024173605403 11420.955377443343 1.0595931436919097 1.139861576909467 1.2682971055569108 1.119678001854629 1.0323206928786206 0.8744983326398694 1.0346194002023892 1.1341505261269191 1.0280032499343053 1.00438394114217 1.0 13.479395718573238 -6.709353886902211 4.011600304402343 1.0145645525633724 1.1591447349651012 0.4380201733632537 0.07227613713962502 0.15295779720818098 5.059848904029947 0.010437316869115356 0.022053408533118705 1.952747601726405e-07 6.709353886902211 0.14458018240172876 GS(ph)PHYFSPFRPY ddPTM_A549_MK2206_60min_R1 8 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GS(0.994)PHY(0.006)FSPFRPY;GS(1)PHYFSPFRPY;GS(0.987)PHY(0.012)FS(0.001)PFRPY;GS(0.923)PHYFS(0.063)PFRPY(0.014);GS(0.657)PHY(0.343)FSPFRPY;GS(1)PHYFSPFRPY;GS(0.77)PHY(0.229)FS(0.002)PFRPY;GS(0.998)PHYFS(0.002)PFRPY 212.1 1.3065e-31 1192813300.0 26550.66 31944.87 31320.160000000003 30263.309999999998 41374.08 30013.53 30773.39 31191.530000000002 50403.15 42141.05 46284.01 True False 31031.7623066858 33570.72743542828 35761.82964571635 37677.822308571616 35288.00763991234 33189.541823231186 36364.5166257878 35613.02489755437 38986.91700229126 32621.357536769683 34790.41294330841 0.8919630346800598 0.9649419077069413 1.0279219652836797 1.0829943976223648 1.0143026384140588 0.9539852797181261 1.0452453290808712 1.0236447884532565 1.1206224273859906 0.9376536458456748 1.0 15.086402182615547 -5.520855917723043 1.979594811740808 1.0462163993629887 0.8826261967100038 0.28892647410467776 0.053070536069014816 0.3261676310427864 1.949515186319422 0.007538377023996826 0.07955953076835645 3.01400579002895e-06 5.520855917723043 -0.16359020265298496 GS(ph)PHYFSPFRPY ddPTM_A549_PD325901_60min_R1 9 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GS(0.998)PHY(0.002)FSPFRPY;GS(0.999)PHYFS(0.001)PFRPY;GS(0.997)PHYFS(0.001)PFRPY(0.002);GS(0.995)PHY(0.005)FSPFRPY;GS(1)PHYFSPFRPY;GS(0.992)PHY(0.008)FSPFRPY;GS(1)PHYFSPFRPY;GS(0.999)PHY(0.001)FSPFRPY;GS(0.895)PHYFS(0.086)PFRPY(0.019) 190.35 1.0770999999999999e-19 1958433000.0 38356.5 38320.1 39522.99999999999 44292.0 52429.1 52334.0 46034.100000000006 50721.1 47884.8 48764.299999999996 50450.50000000001 True False 42250.42364343712 41549.46931140266 42205.26845110613 47027.8162455696 48746.66088657593 51907.80925528239 47785.95286632612 49709.42787056677 45872.368379877546 45685.31377583248 44245.408332069295 0.9549109215207264 0.9390685017429796 0.9538903592966852 1.0628858003211963 1.1017337781295626 1.1731795730238372 1.080020609318021 1.1234934820239217 1.0367712743342232 1.0325436129542855 1.0 15.433240123552519 -6.252894085285144 19.479135050210083 1.0493616119239952 0.9482674951435821 0.5145359912275491 0.050209061517564005 28.045245233535564 63922.771805450306 0.008780095255837788 0.02265957498077673 5.586064097411419e-07 6.252894085285144 -0.10109411678041313 GS(ph)PKVDEK ddPTM_A549_MK2206_60min_R1 2 GSPKVDEK 8 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 GS(1)PKVDEK;GS(1)PKVDEK 68.355 0.0021128 43822000.0 18636.8 18311.8 15168.400000000001 11268.5 10085.2 7900.9 7122.2 8432.9 10837.7 26175.0 27240.0 True False 21782.236213986464 19243.792403978325 17319.50720552142 14029.283005862184 8601.680439783655 8736.967993807039 8416.211548749943 9628.289399673135 8382.978254250613 20262.049320672984 20475.55621424594 1.063816581394326 0.9398422295648989 0.8458625994966287 0.6851722541291094 0.42009508067961576 0.42670235193553685 0.4110370170503273 0.4702333503875328 0.409413945415467 0.9895725961561715 1.0 14.321615022460179 -2.1359886720706958 12.14693758333796 0.6816976436899904 1.0395014841141543 0.0 0.26307453594363456 0.0 0.0 0.039362782948560146 0.0 0.007311581544138828 2.1359886720706958 0.3578038404241639 GS(ph)PKVDEK ddPTM_A549_PD325901_60min_R1 3 GSPKVDEK 8 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 GS(1)PKVDEK;GS(1)PKVDEK;GS(1)PKVDEK 81.625 0.0010282 151501700.0 28687.4 28238.4 25449.899999999998 26025.699999999997 30350.8 25060.5 25058.0 26361.0 26683.5 30257.4 34693.6 True False 31599.723729452326 30618.149070673408 27177.083256681086 27633.248380346788 28219.06451257582 24856.415596782284 26011.595902263743 25835.20917519555 25562.085289370818 28346.942600239814 30426.50714085049 1.0385590295715108 1.0062985188847267 0.8932041765711997 0.9081965357517662 0.9274500152759576 0.8169329289660783 0.8548991766242104 0.8491020364447063 0.8401255251231674 0.9316528666605093 1.0 14.893041106441723 -5.6859088439836665 4.350782993920955 0.903739706247805 1.0305589846699776 0.4922195802186211 0.0503686083145725 0.18955468452944743 6.644556753815785 0.00955497234110005 0.040157938900830435 2.0610624735174916e-06 5.6859088439836665 0.12681927842217267 GS(ph)PLPK ddPTM_A549_MK2206_60min_R1 2 GSPLPK 6 0 F2Z2A4;H7C1J2;H7C1M5;Q9H147 F2Z2A4 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 1 GS(1)PLPK;GS(1)PLPK 87.323 0.020124 14164000.0 3583.8 3707.6 3940.3 3024.0 5005.8 4447.7 4062.5 4606.0 5013.8 4733.8 5138.2 True False 4188.65782450231 3896.3010035600028 4499.093789847053 3764.8801357525167 4269.453451143163 4918.352661855684 4800.603664148245 5258.914605283405 3878.182305393367 3664.431292233115 3862.2431328942153 1.084514278458563 1.0088181581257072 1.1648913947257398 0.9747910750847167 1.1054336312441833 1.273444600099544 1.242957395214749 1.3616218410731118 1.0041269210535713 0.9487831724066352 1.0 11.91522327121371 -8.929049742880265 24.99998179560501 1.0018131680200255 1.1495472658530725 0.31966772441413493 0.10813386701910144 45.308948726495856 15964.353918885367 0.019629733545764957 0.020897379209388993 1.177471101536805e-09 8.929049742880265 0.14773409783304703 GS(ph)PLVLK ddPTM_A549_MK2206_60min_R1 1 GSPLVLK 7 0 Q6UB99;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 GS(1)PLVLK 72.547 0.01968 1764400.0 900.12 1091.0 667.67 891.05 1247.4 765.98 965.22 899.13 1320.9 1215.2 981.65 True False 1052.0382501788654 1146.5272399622293 762.355645678548 1109.3572900007543 1063.9091124207887 847.0354951836268 1140.58797998995 1026.5844309701415 1021.7182590438587 940.685476006946 737.8792128382713 1.4257594357919006 1.5538142557940924 1.0331713272503333 1.5034402253094827 1.4418472480454287 1.1479324535047994 1.545765160672638 1.391263519975523 1.3846687117174548 1.274850218897718 1.0 9.527240863375951 -10.600864902025078 0.7342774077665918 0.9804366201641149 1.3815806407208582 0.167706659831929 0.17131085221143966 0.5240594901308909 0.4682615520662455 0.12406219094347957 0.028322616290125124 2.506888961190733e-11 10.600864902025078 0.40114402055674325 GS(ph)PMMNR ddPTM_A549_PD325901_60min_R1 1 GSPMMNR 7 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 GS(1)PMMNR 40.778 0.040066000000000004 5229500.0 2327.2 2219.6 2856.5 2492.5 3176.1 2502.2 2362.2 2386.7 2508.1 2640.9 2830.6 True False 2563.4556308059073 2406.653481686878 3050.359267529911 2646.4560641217854 2953.02169295017 2481.8229128017656 2452.094813645438 2339.0953961700707 2402.693279152694 2474.153123301187 2482.4541446517924 1.0326296001594328 0.9694654327741684 1.228767618568752 1.066064430564939 1.1895573979935017 0.9997457226545808 0.9877704363354463 0.9422511997691582 0.9678701555591931 0.9966561229868076 1.0 11.277551353515653 -7.451674046502622 10.026487348547562 0.981328474499861 1.0957914056021407 0.4226244145080653 0.06717680787346662 0.4292648885762976 58.84940715694707 0.009693472618268362 0.015494124559736753 3.534483458564348e-08 7.451674046502622 0.11446293110227967 GS(ph)PNLTLPK ddPTM_A549_PD325901_60min_R1 2 GSPNLTLPK 9 0 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 GS(0.984)PNLT(0.016)LPK;GS(0.987)PNLT(0.013)LPK 64.55 0.0062231000000000005 11246400.0 8830.8 9812.099999999999 9911.2 9699.599999999999 11887.400000000001 9467.9 10625.2 10898.3 10995.9 10405.400000000001 12174.5 True False 9727.296315108631 10639.000102567943 10583.833632887263 10298.722262610107 11052.4700333037 9390.796561472238 11029.54780033253 10680.92485694904 10533.780562272279 9748.401268203326 10677.113680514112 0.9110417483763509 0.9964303482114528 0.9912635520780221 0.9645605142713264 1.0351552267795574 0.8795257634664486 1.0330083700861605 1.00035694819302 0.9865756680568628 0.913018401779715 1.0 13.382234078860412 GS(ph)PPEDYR ddPTM_A549_MK2206_60min_R1 1 GSPPEDYR 8 0 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 GS(0.996)PPEDY(0.004)R 57.598 0.01636 3150700.0 480.1 921.29 703.19 569.11 754.44 642.58 748.23 714.05 1077.7 773.16 1051.0 True False 561.1291426819465 968.179725852248 802.9129157887851 708.5419755483185 643.4628754006249 710.5773890899172 884.1737057540045 815.2687741864128 833.6026707332626 598.5026190170593 790.0076938756412 0.7102831365212964 1.2255320212168133 1.0163355648472652 0.8968798418561396 0.8145020363585413 0.8994562896013676 1.1191963225274442 1.0319757396119082 1.0551829775780435 0.7575908736798611 1.0 9.625722893522923 -7.742790062690035 24.99939381508847 1.0336087728801715 0.9382825494676077 0.010822891001742385 0.14900895161114436 402.23558478468976 539195.1827779791 0.018384537059602055 0.02724228825881119 1.8080479224884734e-08 7.742790062690035 -0.0953262234125638 GS(ph)PPEDYR ddPTM_A549_PD325901_60min_R1 2 GSPPEDYR 8 0 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 GS(0.996)PPEDY(0.004)R;GS(0.975)PPEDY(0.025)R 57.858999999999995 0.015816999999999998 7418900.0 1397.83 1488.3 1247.12 1150.04 1811.7 1631.83 1113.3 1539.73 1851.75 2035.39 1728.1399999999999 True False 1539.7366725719414 1613.7242641893051 1331.7570627417833 1221.0753588696564 1684.4524420256994 1618.5409175115117 1155.6672407211352 1509.0188772551815 1773.9273871340863 1906.8751280381698 1515.589735582049 1.0159323703657963 1.064750061512899 0.8787055173808852 0.8056767146161181 1.1114171615703112 1.0679281335261388 0.7625198387064236 0.9956644874449853 1.170453550513672 1.258173688610956 1.0 10.56566355891996 -8.537228196331508 24.149531389724952 1.080627087193026 0.957408977228926 0.26874719170579997 0.12216646894267237 198.8297849136731 334620.44048741355 0.0200449730201572 0.02273454814398851 2.902497161342244e-09 8.537228196331508 -0.12321810996409988 GS(ph)PPLR ddPTM_A549_MK2206_60min_R1 1 GSPPLR 6 0 E5RGI2;Q8TB36 E5RGI2 GDAP1 Ganglioside-induced differentiation-associated protein 1 1 GS(1)PPLR 82.71600000000001 0.041517 10771000.0 2458.2 2448.5 2295.3 1992.3 3137.9 2502.5 2489.8 3050.7 3397.9 2988.4 2626.7 True False 2873.084062780171 2573.1181916109254 2620.8080541674353 2480.413589437747 2676.319066750993 2767.312888974943 2942.164431506783 3483.1460673769175 2628.281075331313 2313.3183644660617 1974.4178967679802 1.455154994027992 1.303228762169846 1.327382647036153 1.2562758844001847 1.3554977753858435 1.4015841800790454 1.4901427080472445 1.7641382166757338 1.331167570772972 1.1716457636718367 1.0 10.94721166137986 -10.107429599871727 0.9702142341966807 1.033291186191256 1.4044568431210473 0.43637691133412904 0.13788298070990423 0.2886846681563493 0.5438376326211276 0.05748299437038002 0.02753614939817583 7.808550082609388e-11 10.107429599871727 0.3711656569297914 GS(ph)PPLR ddPTM_A549_PD325901_60min_R1 1 GSPPLR 6 0 E5RGI2;Q8TB36 E5RGI2 GDAP1 Ganglioside-induced differentiation-associated protein 1 1 GS(1)PPLR 81.191 0.042414 12512000.0 2660.0 2273.8 2871.6 2485.7 3139.4 2227.3 2644.6 2200.5 2516.9 2985.7 2738.3 True False 2930.0412418114984 2465.421105901794 3066.4840443335866 2639.2360435657065 2918.8993743420424 2209.1616072589604 2745.2417001806475 2156.609301241144 2411.1234457555183 2797.1823924572495 2401.5064595138874 1.2200846806818904 1.0266143970317883 1.2769001857918398 1.0989918570112613 1.215445148097951 0.9199065855130527 1.143133173473262 0.8980235271479071 1.004004563970058 1.1647615526395272 1.0 11.229723973768797 -7.255681685447673 24.98689297029045 0.9999255978967404 1.1620341821520113 0.3416785121187681 0.0982634101425666 289.79132236073497 1257617.4723074285 0.010933013600686615 0.018611285543614745 5.5503237285773475e-08 7.255681685447673 0.16210858425527086 GS(ph)PPLRAEGK ddPTM_A549_MK2206_60min_R1 2 GSPPLRAEGK 10 1 E5RGI2;Q8TB36 E5RGI2 GDAP1 Ganglioside-induced differentiation-associated protein 1 1 GS(1)PPLRAEGK;GS(1)PPLRAEGK 83.226 0.00027638 86693000.0 6900.4 6192.1 6235.9 4908.5 6974.1 7054.3 6928.1 6787.200000000001 7817.7 7990.0 7660.5 True False 8065.01882141742 6507.251441402498 7120.244388525549 6111.082720350935 5948.219128534405 7800.781343734636 8186.8460912210385 7749.306384928258 6047.003432301592 6185.053450703997 5758.186430955614 1.4006178712902442 1.1300869673861136 1.2365428722918044 1.0612860131617439 1.0330021786993884 1.3547288607743182 1.4217751004394574 1.3457894213477564 1.0501576329299305 1.0741321985432037 1.0 12.491398783994317 -8.870333709263743 6.660608243124226 1.0220798863400575 1.2393057635842053 0.34619124435059434 0.12562269350945177 0.17385837922437042 9.674338223342366 0.023104304141292473 0.024518389694286605 1.3479267457703285e-09 8.870333709263743 0.21722587724414777 GS(ph)PPLRAEGK ddPTM_A549_PD325901_60min_R1 4 GSPPLRAEGK 10 1 E5RGI2;Q8TB36 E5RGI2 GDAP1 Ganglioside-induced differentiation-associated protein 1 1 GS(1)PPLRAEGK;GS(1)PPLRAEGK;GS(1)PPLRAEGK;GS(1)PPLRAEGK 70.089 0.00091616 133236100.0 19295.3 19257.8 20227.6 19742.4 22915.4 19131.699999999997 20026.1 19986.5 22336.1 23322.899999999998 24214.300000000003 True False 21254.144651550894 20880.72239125497 21600.36657444005 20961.84320975647 21305.901357838342 18975.897778294922 20788.204194202408 19587.853578394057 21397.39139288006 21850.288113688974 21236.09460709457 1.000849970052888 0.9832656511277326 1.017153434945792 0.9870856010762696 1.0032871745975578 0.8935681503300255 0.9789090027531461 0.92238492721021 1.0075954071956152 1.0289221496681982 1.0 14.374230853364367 GS(ph)PPTSSNIVQGQIK ddPTM_A549_PD325901_60min_R1 1 GSPPTSSNIVQGQIK 15 0 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 GS(1)PPTSSNIVQGQIK 150.76 4.9087e-14 4984700.0 2304.6 2404.1 2728.7 2836.9 2624.8 2676.5 2794.6 2986.5 2934.3 2854.2 2749.9 True False 2538.561295443148 2606.7019441896828 2913.885991006079 3012.128869932636 2440.443103068419 2654.7034713907474 2900.9500322637987 2926.931914636072 2810.981575303118 2673.9853248991794 2411.679733052346 1.0526112819425713 1.0808657171449987 1.20823919987009 1.2489754873547536 1.011926695581452 1.1007694906615224 1.2028753206762688 1.2136486758677516 1.1655700119623242 1.1087646872227293 1.0 11.235822617183938 -10.696563137225834 0.9797669668747725 1.000826770604872 1.1448987239132107 0.10993088073967716 0.07752846669625735 0.4952478868064436 0.8530297813267642 0.04882003148906133 0.01310586688065155 2.011114803420209e-11 10.696563137225834 0.14407195330833877 GS(ph)PPVPSGPPMEEDGLR ddPTM_A549_MK2206_60min_R1 2 GSPPVPSGPPMEEDGLR 17 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 GS(0.946)PPVPS(0.054)GPPMEEDGLR;GS(0.996)PPVPS(0.004)GPPMEEDGLR 53.403 0.005100199999999999 8579500.0 2485.3 3068.5 2498.43 2594.7 3678.0 3227.4 2730.9 3481.8999999999996 3796.0 3789.9 3866.0 True False 2904.7578802487833 3224.67354337681 2852.744942610352 3230.4016164805084 3136.971072217138 3568.921325825264 3227.0691806578334 3975.4699878715332 2936.2120609663802 2933.7589578001366 2905.965503828001 0.9995844329268097 1.1096737174371056 0.9816857560258228 1.1116448602797007 1.0794935686899365 1.2281361637376484 1.1104981034382015 1.3680375705199128 1.0104084364038513 1.0095642752591258 1.0 11.50480186177198 -8.948480530086913 24.999997025741397 1.0045903707262502 1.123932502396736 0.21547599251332217 0.09940627365760381 107.72480036193411 52273.8867835154 0.016980529697891697 0.018075335557760842 1.1259509454185213e-09 8.948480530086913 0.11934213167048568 GS(ph)PQAISR ddPTM_A549_MK2206_60min_R1 2 GSPQAISR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GS(0.992)PQAIS(0.008)R;GS(0.793)PQAIS(0.207)R 79.97399999999999 0.0039949 10093500.0 1779.2 1644.4099999999999 1162.9 1432.12 2314.2 1490.41 1337.76 1586.5900000000001 1765.51 1996.52 2285.21 True False 2079.485462736344 1728.1034451570033 1327.816706396249 1782.9894642903107 1973.7842456022033 1648.1241969459113 1580.8136757540813 1811.4939912280938 1365.624803940135 1545.5047453566392 1717.7292884125175 1.2106013891502965 1.0060394596601852 0.7730069664372924 1.0379921191994723 1.1490659552218065 0.9594784277498503 0.9202926715041517 1.054586426073128 0.7950174763581119 0.8997370865027027 1.0 10.746286972454795 -8.738373974058314 24.925312244223463 0.9032026623794777 1.005968859517508 0.15958770639965958 0.11700786470479554 367.7486096461196 397402.26843325817 0.021744219001251026 0.02464761162260691 1.826526703660636e-09 8.738373974058314 0.10276619713803037 GS(ph)PQAISR ddPTM_A549_PD325901_60min_R1 2 GSPQAISR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 GS(0.995)PQAIS(0.005)R;GS(0.995)PQAIS(0.005)R 60.342 0.011349 7835100.0 1848.6 1731.67 2108.91 1773.5 1923.7199999999998 1737.65 1559.0 1869.53 1809.48 1669.55 2057.17 True False 2036.2685111326068 1877.603908196394 2252.0333145060413 1883.0450670892626 1788.6045436737204 1723.4991545160224 1618.3285981175345 1832.2407575320867 1733.4338482362023 1564.1343280728147 1804.1511314750692 1.1286573921707763 1.0407132060279618 1.2482509226734153 1.0437291168338485 0.9913828794438978 0.955296440773725 0.8970027897798082 1.015569441809485 0.9608030158864526 0.8669641366430221 1.0 10.817104481069695 -6.538979637168107 4.3418789356565455 0.9763750914406755 1.1323957796730117 0.6110576238744079 0.06290386999317207 0.09295336203727232 4.206987619020628 0.007257727299200302 0.01619738007953308 2.890815421293372e-07 6.538979637168107 0.15602068823233628 GS(ph)PQINR ddPTM_A549_MK2206_60min_R1 1 GSPQINR 7 0 E9PC87;O94876;D6RBT7 E9PC87 TMCC1 Transmembrane and coiled-coil domains protein 1 1 GS(1)PQINR 60.518 0.028723000000000002 6365100.0 1677.2 1446.1 1245.5 1361.8 2035.3 1856.8 1462.5 1376.0 1795.6 1853.5 2437.5 True False 1960.2703563969183 1519.700313207498 1422.1306284431396 1695.4410611335259 1735.910066145606 2053.285343555913 1728.2173190933695 1571.0522138232668 1388.8994669839908 1434.7930626883428 1832.2014784223375 1.0698989054876529 0.8294395191275982 0.7761868141639644 0.9253573262005156 0.9474449652995337 1.1206656951963305 0.9432463293182658 0.8574669501828261 0.7580495285812875 0.7830978631912289 1.0 10.839362443085081 -5.246002175161711 23.274505193118994 0.8971044141799439 1.0698992397866451 0.1903400725500709 0.10406864791303196 1632.5110099412332 2461211.4049103777 0.01617012948911549 0.49058963807535927 5.675417628713868e-06 5.246002175161711 0.17279482560670123 GS(ph)PQINR ddPTM_A549_PD325901_60min_R1 1 GSPQINR 7 0 E9PC87;O94876;D6RBT7 E9PC87 TMCC1 Transmembrane and coiled-coil domains protein 1 1 GS(1)PQINR 51.276 0.05015 5612500.0 2280.2 2145.9 2300.3 2421.8 2889.3 1703.7 2086.1 1669.3 2656.6 2702.4 2370.4 True False 2511.68422540548 2326.7425240367056 2456.412190827607 2571.389085693136 2686.3655355438837 1689.8256320599355 2165.4876770577216 1636.0045019594836 2544.952340575355 2531.770002805532 2078.8558272036357 1.2082051061636447 1.119241889499626 1.18161738716236 1.2369251643352437 1.2922327274409582 0.8128633116097317 1.0416728513446833 0.7869735267597409 1.2242081953315094 1.2178670447825772 1.0 11.021573992550195 GS(ph)PQQIDHAK ddPTM_A549_MK2206_60min_R1 2 GSPQQIDHAK 10 0 A0A087WTP3;Q92945;M0R3J3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 GS(1)PQQIDHAK;GS(1)PQQIDHAK 120.53 1.5533e-05 50027000.0 4909.1 5428.6 5634.5 5082.7 7271.5 5556.9 5890.0 6141.9 8007.0 8191.8 8389.5 True False 5737.636064028209 5704.892552574665 6433.556825341528 6327.961728171075 6201.871982497801 6144.927469628315 6960.13675860509 7012.533133779883 6193.427284551581 6341.266690547813 6306.155611579155 0.909846888886305 0.9046545794238774 1.0202026752286992 1.0034579096893645 0.9834632007986177 0.9744332122640934 1.1037052028695764 1.1120139694782827 0.9821240809819873 1.0055677469969482 1.0 12.622545055267482 -5.7579010993497635 24.962459752523312 1.0074522595831261 0.9072506889937655 0.46098498788529707 0.0454833914492607 66.71189384414478 470627.33247689373 0.006783897969858471 0.024328435921912493 1.7462197693186637e-06 5.7579010993497635 -0.10020157058936063 GS(ph)PQQIDHAK ddPTM_A549_PD325901_60min_R1 2 GSPQQIDHAK 10 0 A0A087WTP3;Q92945;M0R3J3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 GS(1)PQQIDHAK;GS(1)PQQIDHAK 138.21 9.984700000000001e-08 77787000.0 10980.1 10031.4 11821.4 11050.9 14342.4 11585.8 12674.2 11576.3 13484.5 13487.4 14928.1 True False 12094.791668877597 10876.781283201366 12623.671291853007 11733.488994585141 13335.039302593907 11491.449086059742 13156.523616588354 11345.401615068336 12917.793358611907 12635.80326222591 13092.038337022688 0.9238280058098364 0.8307935711159014 0.964225047841084 0.8962308765476392 1.018560972654964 0.8777433116402756 1.0049255339700092 0.8665878698953183 0.9866907677838036 0.9651517156418187 1.0 13.67640211165151 -2.0000073761375123 0.10063391098864681 1.0463580650569706 0.5765145093365619 0.14617628989204 0.05624265498512216 90.51209249662159 0.6246671382970068 0.32035029414019933 5.899265351446184 0.009999830159599507 2.0000073761375123 -0.4698435557204087 GS(ph)PRPQAPK ddPTM_A549_MK2206_60min_R1 4 GSPRPQAPK 9 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK 81.771 0.00047593 1091825000.0 32462.5 33520.4 33315.8 28454.7 38864.1 31880.0 29673.3 31839.5 41348.5 44041.4 44358.700000000004 True False 37941.37636807472 35226.445182795534 38040.481405930135 35426.10277738002 33147.24237296196 35253.52043976868 35064.55451258341 36352.84662937928 31983.13076998636 34092.41715191929 33343.21055216121 1.1379041112048962 1.0564803028697025 1.1408763816076033 1.0624682563774233 0.994122696166505 1.0572923199647808 1.0516250214636462 1.0902623360911774 0.9592096933782913 1.022469539895867 1.0 15.025105404829945 -6.939321610373701 0.3750911052244852 0.9797886994815234 1.1368505403181743 0.36918834241006393 0.04312888894701641 1.23867380126653 0.26900369324880674 0.015592586004108653 0.07474885289408074 1.1499484961553859e-07 6.939321610373701 0.15706184083665098 GS(ph)PRPQAPK ddPTM_A549_PD325901_60min_R1 7 GSPRPQAPK 9 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK 84.68700000000001 0.0011075 1622621100.0 48447.299999999996 49836.7 50372.200000000004 50962.200000000004 57782.5 50063.200000000004 47123.799999999996 48260.100000000006 52829.9 52102.2 57298.5 True False 53365.63423098275 54036.61361091388 53790.76040464561 54110.01935044627 53724.056538803336 49655.50189760103 48917.12199613278 47297.514446183966 50609.64302392605 48812.45820018291 50251.14774511792 1.0619784149341627 1.075330933434525 1.0704384440626349 1.0767917108063119 1.069111034265338 0.9881466220326329 0.9734528302567029 0.9412225703994808 1.007134071456964 0.9713700162186886 1.0 15.616868927627678 -7.257208210196144 23.921339164972043 0.9948240565389922 1.0713062679235679 0.8323568348686727 0.019636989371324798 74.21309147089664 419569.37072631816 0.0031305914965043687 0.005297921541404293 5.530848847513447e-08 7.257208210196144 0.07648221138457567 GS(ph)PRYS(ph)PR ddPTM_A549_MK2206_60min_R1 4 GSPRYSPR 8 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 GS(1)PRY(0.004)S(0.997)PR;GS(1)PRYS(1)PR;GS(1)PRY(0.003)S(0.997)PR;GS(1)PRY(0.001)S(1)PR 86.243 0.002338 496068000.0 17075.6 16736.6 13507.0 12448.6 22379.5 16615.9 15694.399999999998 18202.9 22154.9 22828.8 21783.0 True False 19957.543821661817 17588.421452201517 15422.49570323685 15498.507558838895 19087.505195944377 18374.183509258248 18545.86932839587 20783.216819043264 17136.850524105386 17671.758224709814 16373.67991978411 1.2188795627760727 1.0741886697656555 0.9419077311143748 0.9465500507379679 1.1657431493381758 1.122178007587467 1.1326634830565567 1.2693064064316517 1.0466095958917059 1.0792783486232227 1.0 13.999090977805627 -8.984874817637994 22.443096080563617 1.0205626718240994 1.1035436375063667 0.0803636778136505 0.09598715658234055 44.99919633733471 66774.27721519236 0.017832198104524983 0.01801003666920631 1.0354405822110172e-09 8.984874817637994 0.08298096568226732 GS(ph)PRYS(ph)PR ddPTM_A549_PD325901_60min_R1 4 GSPRYSPR 8 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 GS(0.999)PRY(0.003)S(0.998)PR;GS(1)PRY(0.001)S(1)PR;GS(1)PRY(0.035)S(0.965)PR;GS(0.999)PRY(0.022)S(0.978)PR 79.283 0.0023698 774720000.0 12376.7 13138.0 12930.2 12502.8 16170.1 11398.7 11159.3 12889.0 13834.099999999999 14653.4 14866.4 True False 13633.173472755021 14245.185367815011 13807.721127609062 13275.069560080987 15034.36795981661 11305.872766426937 11583.973268103264 12631.9187837751 13252.70088637865 13728.18182323512 13037.927045874165 1.0456549898451242 1.0925958795208077 1.059042674424114 1.018188667061292 1.153125639292039 0.8671526329796934 0.8884827493929717 0.9688594466995775 1.0164730052368602 1.0529420647110757 1.0 13.670426887280103 -7.245420299637677 24.997112849382926 0.9859862619701083 1.0708694783488169 0.42111144986206583 0.060542724758238776 801.1870420611028 1250218.9817559985 0.009139382252667947 0.015798058435729814 5.6830267511670285e-08 7.245420299637677 0.08488321637870855 GS(ph)PSGGS(ph)TAEASDTLSIR ddPTM_A549_PD325901_60min_R1 2 GSPSGGSTAEASDTLSIR 18 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 2 GS(0.994)PS(0.052)GGS(0.849)T(0.104)AEASDTLSIR;GS(0.987)PS(0.068)GGS(0.743)T(0.144)AEAS(0.02)DT(0.021)LS(0.016)IR 90.87200000000001 6.4114999999999995e-06 5608800.0 1362.17 1700.48 1910.17 1817.98 2308.7 2203.73 2002.3 2014.72 2082.1 2073.51 2084.6099999999997 True False 1500.4564956234456 1843.7854174350782 2039.8056229853357 1930.2724956678546 2146.54487658262 2185.7835535243526 2078.4986222006023 1974.5348290827355 1994.5965776977896 1942.5882247325687 1828.2161854315589 0.8207215905756002 1.0085160782010274 1.1157354580053835 1.055822889573754 1.1741198298580418 1.1955826509699061 1.136899803624681 1.0800335566532782 1.0910069572690912 1.0625593626248373 1.0 10.83622096294041 -5.311810357965911 2.848659549965138 1.075845677869349 0.7897160835365413 0.6538588900729951 0.05740468846176711 0.21979100193982914 2.621086835354392 0.00991792437734911 0.1363408328888964 4.877414241551578e-06 5.311810357965911 -0.2861295943328077 GS(ph)PSGGSTAEAS(ph)DTLSIR ddPTM_A549_MK2206_60min_R1 1 GSPSGGSTAEASDTLSIR 18 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 2 GS(0.996)PS(0.259)GGS(0.158)T(0.141)AEAS(0.422)DT(0.012)LS(0.012)IR 46.159 0.0316 2041800.0 562.23 440.46 461.48 510.01 828.78 430.66 577.53 464.55 761.45 922.69 342.71 True False 657.1206787962312 462.8775326432298 526.9248032227538 634.9624728952185 706.8675598782277 476.23215535102844 682.4597253305934 530.4013851247082 588.9827907857878 714.253688163964 257.605648685177 2.5508783761155267 1.796845430237122 2.045470687122684 2.4648623822345366 2.7439909159061147 1.848686772909384 2.6492420830594274 2.0589664389421762 2.286373741383252 2.7726631454299437 1.0 8.00902041847859 -10.65551733501397 0.6613071716251101 0.8773907959419666 2.281208046916028 0.0 0.6028958975684704 0.3841948449633953 0.2590004820299078 0.3065385154178433 0.05923160912567625 2.210460023264596e-11 10.65551733501397 1.4038172509740612 GS(ph)PSPASVSSGR ddPTM_A549_MK2206_60min_R1 2 GSPSPASVSSGR 12 0 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 GS(0.981)PS(0.019)PASVSSGR;GS(0.949)PS(0.051)PASVSSGR 159.36 6.4935e-14 96811000.0 16492.3 16863.4 15436.7 13336.0 20625.0 16500.3 14635.5 15855.3 21739.0 25071.0 23124.0 True False 19275.797041977632 17721.67503059494 17625.856179918286 16603.320598675797 17591.08982177229 18246.3507939873 17294.58090501949 18102.837329819795 16815.15121004955 19407.4436874343 17381.672610066926 1.1089725065246994 1.0195609725344323 1.014048335584801 0.9552199590423576 1.0120481622455642 1.0497465464525884 0.9949894519934178 1.0414899495538301 0.9674069686659922 1.1165463832401326 1.0 14.085279296577623 -8.764453934043514 24.99404531836152 0.9846088465135866 1.021128035889707 0.0 0.05398039088699975 102.32715362517696 848406.8137812624 0.006325475387126698 0.006873183060583855 1.720069780713698e-09 8.764453934043514 0.03651918937612042 GS(ph)PSPASVSSGR ddPTM_A549_PD325901_60min_R1 2 GSPSPASVSSGR 12 0 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 GS(0.999)PS(0.001)PASVSSGR;GS(0.807)PS(0.193)PASVSSGR 156.46 8.7697e-14 134950000.0 14720.2 14619.0 14063.7 14770.400000000001 18450.0 14750.5 13533.0 13572.2 15259.6 16011.1 16344.3 True False 16214.583867561503 15850.994435384968 15018.14725389827 15682.734061987736 17154.135649044634 14630.376818512685 14048.005720541749 13301.491823815082 14618.29207868843 15000.156413528579 14334.054715054162 1.131193105502265 1.1058276775473488 1.0477249844822798 1.0940891725156554 1.196739930888412 1.0206725946948783 0.9800440977658614 0.927964353997153 1.0198295157430752 1.0464698727412316 1.0 13.807159146152976 -7.463946639660067 10.833192248958348 1.0002068060785734 1.1096588264764131 0.6453998638998569 0.04294901258313774 0.4144361255875098 75.30142174810048 0.006230477664881759 0.00995512395248452 3.436001623325136e-08 7.463946639660067 0.10945202039783974 GS(ph)PSPEKPDVEK ddPTM_A549_PD325901_60min_R1 1 GSPSPEKPDVEK 12 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GS(0.981)PS(0.019)PEKPDVEK 63.037 0.0019307000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GS(ph)PSPPQAEAR ddPTM_A549_MK2206_60min_R1 1 GSPSPPQAEAR 11 0 M0R1G0;M0QZE8;M0R0K4;M0QYB1;M0R0E3;M0R0S2;M0R0S1;M0R2P6;Q8TBC3;M0QZF4 M0R1G0 SHKBP1 SH3KBP1-binding protein 1 1 GS(0.5)PS(0.5)PPQAEAR 62.799 0.0071694 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GS(ph)PSSHLLGADHGLR ddPTM_A549_PD325901_60min_R1 1 GSPSSHLLGADHGLR 15 0 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 GS(0.97)PS(0.023)S(0.007)HLLGADHGLR 60.949 0.0016619 5862000.0 966.29 1221.5 1201.1 1130.5 1321.4 1271.3 1216.0 1326.7 1376.0 1520.6 1289.5 True False 1064.3870494548994 1324.440091854623 1282.6138688010426 1200.3284174482174 1228.5894225825239 1260.946954298171 1262.2755454207318 1300.2379277239836 1318.1715051688957 1424.5890564927809 1130.8996748139923 0.9411860956012453 1.1711384496352109 1.1341535393155047 1.061392486159875 1.0863823289935948 1.1149945325659136 1.1161693415716543 1.1497376440026332 1.1655954409799485 1.2596953454134594 1.0 10.143255234265489 -2.058256794863127 24.582103205229647 1.0902971179777934 0.022107797851923516 0.0 0.08467868879675312 0.0 0.0 0.009982956137587248 0.0 0.008744665572287032 2.058256794863127 -1.0681893201258699 GS(ph)PTGGAQLLK ddPTM_A549_MK2206_60min_R1 2 GSPTGGAQLLK 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(0.999)PT(0.001)GGAQLLK;GS(0.993)PT(0.007)GGAQLLK 160.69 2.131e-13 159350000.0 12679.4 13973.8 12292.2 12036.3 16717.0 12424.6 12351.2 13383.0 18356.2 17750.0 17510.9 True False 14819.372738432552 14685.006733074431 14035.418796426151 14985.19404033003 14257.951444875993 13739.362925218005 14595.253163477611 15280.081233718593 14198.550008827984 13740.262672089606 13162.460253745936 1.1258816705041956 1.1156733961567094 1.0663218369401555 1.1384797181868305 1.0832284519771513 1.0438293951397033 1.1088544908862241 1.1608833712808362 1.0787155087353206 1.0438977521834667 1.0 13.684141554347624 -10.072552972765166 0.7532685502357745 1.003489252617414 1.1028757016060036 0.437756916132915 0.03407350231790483 0.3354382963203556 0.3777752256623225 0.016875412735749613 0.006889709885993788 8.461493540379709e-11 10.072552972765166 0.09938644898858962 GS(ph)PTGGAQLLK ddPTM_A549_PD325901_60min_R1 2 GSPTGGAQLLK 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(0.948)PT(0.052)GGAQLLK;GS(0.937)PT(0.063)GGAQLLK 153.81 8.9503e-13 369560000.0 14759.5 13885.0 14612.099999999999 14437.2 18091.1 14363.8 15396.0 15047.5 14380.9 15385.7 15732.1 True False 16257.87357463038 15055.137679411735 15603.764975695356 15328.953054739835 16820.44354690684 14246.825975102716 15981.903205014476 14747.365807964605 13776.520783926873 14414.244276260013 13797.15143399862 1.1783500132185332 1.0911772441892038 1.1309410533282196 1.11102303457847 1.2191243697926148 1.032591839210811 1.1583480315822468 1.068870330119338 0.9985047167039922 1.044726104892983 1.0 13.752082817839067 -8.567494974382955 2.994656128783752 0.9990653821401138 1.1288289771097955 0.5357328974598328 0.04745639675327579 0.10992712432874668 2.0108670722176822 0.0071100592012820615 0.008216170468974635 2.7071045301125015e-09 8.567494974382955 0.1297635949696817 GS(ph)PTGGAQLLKR ddPTM_A549_MK2206_60min_R1 2 GSPTGGAQLLKR 12 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(0.647)PT(0.353)GGAQLLKR;GS(0.991)PT(0.009)GGAQLLKR 98.895 0.00010452 67190000.0 14682.7 16918.1 17816.7 13740.7 24304.0 17856.6 13817.9 14530.2 27964.0 24856.0 25919.0 True False 17160.78080244994 17779.15902695234 20343.375967710075 17107.172116843467 20728.91379531413 19746.17355974822 16328.43356820531 16589.900346871247 21630.198649331884 19241.012336758275 19482.596971991214 0.8808261458737154 0.9125661764965015 1.0441819433495618 0.878074526791129 1.0639707747953038 1.0135288220628866 0.8381035439823332 0.8515240740606298 1.1102317971484053 0.9875999777863163 1.0 14.249898376728128 -8.771055359304771 24.99996294522014 1.0520539019809887 0.9399584566671251 0.22095787615894058 0.07872533477798262 190.54765067043462 495390.9710246544 0.014236854933798984 0.015250253784336736 1.6941218378028766e-09 8.771055359304771 -0.11209544531386362 GS(ph)PTGGAQLLKR ddPTM_A549_PD325901_60min_R1 2 GSPTGGAQLLKR 12 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(0.959)PT(0.041)GGAQLLKR;GS(0.973)PT(0.027)GGAQLLKR 63.754 0.0028607 118240000.0 5175.4 5711.2 5352.0 5555.8 6327.7 6316.6 5734.3 6216.1 7226.5 7030.8 7135.700000000001 True False 5700.80279807189 6192.502867458144 5715.218904190472 5898.969147862718 5883.264181379926 6265.159703862053 5952.52192442936 6092.115009063888 6922.795335830685 6586.874088116163 6258.054136929201 0.9109545352813531 0.9895252952376625 0.9132581436879202 0.9426203447254478 0.9401107840634337 1.001135427527052 0.9511777613592579 0.9734839098169357 1.1062217079553212 1.0525434814068757 1.0 12.611498423704562 -8.604154263934761 6.84732992099791 1.0500356973586744 0.952026885813651 0.6329095576304107 0.034281111181086496 0.1290128681741692 9.02965045098774 0.00742999948514355 0.008428178798632445 2.4879734186290027e-09 8.604154263934761 -0.09800881154502339 GS(ph)PTRPNPPVR ddPTM_A549_MK2206_60min_R1 4 GSPTRPNPPVR 11 1 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GS(0.987)PT(0.013)RPNPPVR;GS(0.877)PT(0.123)RPNPPVR;GS(0.981)PT(0.019)RPNPPVR;GS(0.996)PT(0.004)RPNPPVR 143.56 7.3316e-12 964009000.0 18627.6 21878.4 20655.7 19784.7 29106.1 21574.8 20549.199999999997 21654.799999999996 32185.8 31755.800000000003 32672.3 True False 21771.48347890486 22991.91710979803 23584.98885743314 24631.952388168927 24824.631246617515 23857.83101580682 24282.723646846807 24724.43421504367 24895.76769016115 24582.14272463907 24558.86620039307 0.8865019786034097 0.9361961957930305 0.9603451830791626 1.0029759593614582 1.0108215519420107 0.9714549043564955 0.9887558916078202 1.0067416799008397 1.0137181206583017 1.0009477849692274 1.0 14.583956337455112 -5.33369252818858 0.8911812791470547 1.0040082171075662 0.828560037714301 0.8909146333395681 0.012343976496490985 0.45064367823192997 0.28279162930695334 0.002050040121200275 0.07480838025326236 4.637751470664059e-06 5.33369252818858 -0.17544817939326518 GS(ph)PTRPNPPVR ddPTM_A549_PD325901_60min_R1 6 GSPTRPNPPVR 11 1 Q14195-2;H0YBT4;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GS(0.93)PT(0.07)RPNPPVR;GS(0.965)PT(0.035)RPNPPVR;GS(0.957)PT(0.043)RPNPPVR;GS(0.946)PT(0.054)RPNPPVR;GS(0.795)PT(0.205)RPNPPVR;GS(0.991)PT(0.009)RPNPPVR 138.31 5.815100000000001e-09 1304243300.0 34353.700000000004 34022.0 35626.299999999996 37109.8 40077.5 38079.8 35778.59999999999 36064.3 38273.3 39614.4 44114.4 True False 37841.26233414272 36889.15334021938 38044.11495634546 39401.98806352927 37262.59465986917 37769.69073411745 37140.174201801135 35344.96924460396 36664.806299985976 37113.1400233642 38688.608464222074 0.9780983042886395 0.9534887607636039 0.9833415174786496 1.0184390089906414 0.9631412485235381 0.9762483644002238 0.9599769977808099 0.9135756143126679 0.9476899727187748 0.9592782345140478 1.0 15.239621219008553 GS(ph)PTSAYPER ddPTM_A549_MK2206_60min_R1 4 GSPTSAYPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.983)PT(0.016)S(0.001)AYPER;GS(0.999)PT(0.001)SAYPER;GS(0.57)PT(0.318)S(0.112)AYPER;GS(0.965)PT(0.029)S(0.007)AYPER 164.6 3.9994e-09 308894000.0 13517.599999999999 13839.099999999999 12933.599999999999 11381.0 16521.8 13099.7 12543.399999999998 12924.5 18682.5 18418.7 18415.7 True False 15799.040406410073 14543.451078424649 14767.778961085667 14169.345510912503 14091.465106296115 14485.901559122893 14822.373415600508 14756.587454621234 14450.943579822024 14257.902877657287 13842.573442536295 1.141336939406211 1.0506320330390775 1.0668376817641685 1.023606309168791 1.0179801584433 1.0464746038196726 1.0707816344360814 1.066029197235559 1.0439492078413897 1.030003773275621 1.0 13.756824555736113 -6.153093991246393 0.008324341952444208 7.326276468909585e-08 2.1309264300572095 0.3263834590063214 0.0292599558041872 3945.326723170751 6.477110679887369 790.5087528591029 868.6878321816 7.029201754380198e-07 6.153093991246393 2.1309263567944448 GS(ph)PTSAYPER ddPTM_A549_PD325901_60min_R1 4 GSPTSAYPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.991)PT(0.002)S(0.007)AYPER;GS(0.998)PT(0.002)SAYPER;GS(0.985)PT(0.015)SAYPER;GS(0.993)PT(0.007)SAYPER 202.68 1.3554000000000002e-19 430360000.0 19744.1 20515.7 21082.5 20374.3 25020.3 21486.899999999998 21370.9 20876.4 22280.8 23105.6 24298.4 True False 21748.50649716181 22244.6300388554 22513.28522937139 21632.774237607442 23262.960443349122 21311.91781035898 22184.181294105198 20460.00382478102 21344.415459569147 21646.708472773633 21309.850840248404 1.0205846422953324 1.0438660601434835 1.056473149349785 1.0151537145792275 1.091652898827984 1.0000969959914816 1.041029402805834 0.9601195230394453 1.0016220019360933 1.0158076016134754 1.0 14.37923287446326 -7.786733401114711 1.9061147243958783 0.9983416365544115 1.0430390590936869 0.35849243288813204 0.026645139614127563 0.23851408813820651 1.7757008386548923 0.0038241284858592435 0.005795825446419615 1.634054731728633e-08 7.786733401114711 0.04469742253927533 GS(ph)PTSAYPERR ddPTM_A549_MK2206_60min_R1 1 GSPTSAYPERR 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.823)PT(0.169)S(0.008)AYPERR 88.163 0.00012779 4806500.0 1470.5 2053.7 1397.3 1346.0 2181.9 1506.9 1043.8 1224.6 1869.0 2383.2 2145.7 True False 1718.6844497267284 2158.224557938067 1595.4581510426335 1675.7700604242357 1860.9454003454528 1666.3591578007351 1233.4449488339537 1398.1908001802128 1445.6744841797056 1844.8334647957165 1612.8634716926397 1.0656106235222957 1.338132207602849 0.9892084352113574 1.0390030463431463 1.1538145869175525 1.0331681429004984 0.7647547176076221 0.8668996630650108 0.896340272783613 1.1438249406564047 1.0 10.655408604712742 -7.527116157915691 24.92328185373596 0.928128484950797 1.115531668253355 0.34474814952802457 0.12002416592401964 86.95388210668463 511437.1552721491 0.016105385386800918 0.02394388401252922 2.970871325866755e-08 7.527116157915691 0.1874031833025579 GS(ph)PTSAYPERR ddPTM_A549_PD325901_60min_R1 1 GSPTSAYPERR 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(0.909)PT(0.078)S(0.006)AY(0.006)PERR 53.136 0.0089476 9172400.0 2177.2 2245.5 2073.0 2331.1 2563.3 2331.0 2213.6 2291.6 2215.6 2599.1 2452.5 True False 2398.227741230073 2434.7361655829345 2213.6862459616686 2475.086752687781 2383.2626509049373 2312.0171088405878 2297.839759328397 2245.8922402745784 2122.486036956545 2434.9923824348184 2150.858047678415 1.1150097719459744 1.1319836602935889 1.0292107600271756 1.1507438881702727 1.108052041592133 1.0749277997848923 1.0683363143414466 1.044184316440009 0.9868089803729753 1.1321027833813073 1.0 11.070696597582875 -8.248961503996364 1.2532024651196647 0.9931073559147249 1.1044189032656366 0.07623074745308211 0.051357056516759717 0.1531778792525292 0.4690576125062977 0.005314962044340149 0.006985101929867736 5.636876190647945e-09 8.248961503996364 0.11131154735091175 GS(ph)PVFLPR ddPTM_A549_MK2206_60min_R1 1 GSPVFLPR 8 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 GS(1)PVFLPR 120.12 2.0598e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GS(ph)PVPPVPER ddPTM_A549_MK2206_60min_R1 2 GSPVPPVPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(1)PVPPVPER;GS(1)PVPPVPER 107.03 0.00027721 21610000.0 4221.0 4456.7 3406.1 3760.2 5187.6 4174.2 3376.5 4660.4 5124.700000000001 5168.7 5291.4 True False 4933.401606458023 4683.526993895206 3889.1361971418546 4681.449168801792 4424.510911972165 4615.911073390289 3989.9663438760745 5321.02597187642 3963.963632464277 4001.087080181946 3977.3993447893126 1.2403586310540187 1.1775350141873415 0.9778088293389274 1.17701260622342 1.1124130439073465 1.1605349810894583 1.003159602040772 1.3378153689413554 0.9966219855839626 1.0059555838725789 1.0 11.957609705699682 GS(ph)PVPPVPER ddPTM_A549_PD325901_60min_R1 2 GSPVPPVPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GS(1)PVPPVPER;GS(1)PVPPVPER 79.86 0.0012300999999999998 25652000.0 8058.2 9403.0 6940.6 7970.4 9206.2 7632.6 7186.7 8034.799999999999 8189.3 8531.5 9856.2 True False 8876.262531866696 10195.423809831365 7411.630853218308 8462.713505908241 8559.588271665842 7570.44263618047 7460.193801213133 7874.539610821332 7845.132200057878 7992.8196340051 8643.949883599593 1.0268757514094196 1.1794866868878344 0.8574356576593072 0.9790331526522132 0.9902403862736626 0.8758082517974892 0.8630538008286659 0.9109885777752964 0.9075864975735997 0.9246721396626905 1.0 13.077474992341699 -5.760160063701006 24.99999421973138 0.9397560099217874 1.1031812213800212 0.5694949532738305 0.05893367654090655 19.28021041161852 376722.1554609744 0.008579611421148495 0.029942427611427267 1.7371604623827822e-06 5.760160063701006 0.16342521145823374 GS(ph)PVRVK ddPTM_A549_MK2206_60min_R1 2 GSPVRVK 7 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 GS(1)PVRVK;GS(1)PVRVK 78.334 0.0046903 30709000.0 4903.3 6207.8 6291.200000000001 5747.8 8314.9 5002.9 5344.5 3957.8 9323.6 7727.7 7866.6 True False 5730.857165824592 6523.7505043423735 7183.386760065423 7156.011258028551 7091.789224681428 5532.303557343751 6315.526469671457 4518.830270254161 7211.819486729748 5982.007202879263 5913.106112884985 0.9691788133713239 1.1032696487767673 1.214824598600121 1.210194967148519 1.1993340030255888 0.935600249974976 1.0680556629805062 0.7642058478212289 1.2196330234992392 1.0116522667915833 1.0 12.529700451695188 -7.205514084823514 24.99952495493709 1.0643587810273731 1.1454830484161653 0.1327257802549081 0.12879700584876938 687.8604685924197 307484.5980608342 0.02104406911083166 0.03644939060866223 6.22996942373185e-08 7.205514084823514 0.08112426738879219 GS(ph)PVRVK ddPTM_A549_PD325901_60min_R1 2 GSPVRVK 7 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 GS(1)PVRVK;GS(1)PVRVK 93.649 0.0033802 53234000.0 6400.5 7328.9 7853.6 8161.9 6644.200000000001 10755.099999999999 9725.1 11010.3 8205.5 8493.1 7801.4 True False 7050.274048200933 7946.532123776781 8386.592523533314 8666.042025980187 6177.534313245659 10667.514031442033 10095.194002278917 10790.69092908675 7860.651370394897 7956.844216558482 6841.877257149194 1.0304590075529318 1.161454937747285 1.2257736010639508 1.2666175817353187 0.9029004878435445 1.5591501616453827 1.4755006006180946 1.5771535389371936 1.148902717040293 1.162962139995166 1.0 12.7401765071411 -9.208003234892502 2.677411234403656 1.0533229484419082 1.2748373582382047 0.11291654048025346 0.20199085441804496 0.31331985161664366 4.639151917224902 0.04103261380795222 0.03851698589706915 6.19436461115726e-10 9.208003234892502 0.22151440979629644 GS(ph)PVTTR ddPTM_A549_MK2206_60min_R1 2 GSPVTTR 7 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GS(0.999)PVT(0.001)TR;GS(0.967)PVT(0.028)T(0.005)R 87.258 0.012933000000000002 117652000.0 6763.799999999999 5930.9 4216.7 2293.87 4722.3 4252.7 4354.6 4318.9 4545.7 8418.400000000001 7966.2 True False 7905.364080966775 6232.757477077897 4814.691466042702 2855.868252975736 4027.655925592985 4702.717891286207 5145.774453144603 4931.117301076529 3516.1062079912717 6516.677593167276 5987.972684064832 1.320207104819382 1.040879410432931 0.8040603590018938 0.4769340816426503 0.6726242984226308 0.7853606119147906 0.8593516912390928 0.8235036399212705 0.5871947641558751 1.0882944757763227 1.0 12.547851924786858 -5.507654284443503 2.4836261817735052 0.7740003155821784 1.3252791915826254 0.49407188638108257 0.16368445641448048 0.22595209529031227 2.3547276885632997 0.024487010309913074 0.20765185941352315 3.107031924057605e-06 5.507654284443503 0.551278876000447 GS(ph)PVTTREPT(ph)PR ddPTM_A549_PD325901_60min_R1 1 GSPVTTREPTPR 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 2 GS(0.971)PVT(0.228)T(0.207)REPT(0.594)PR 42.338 0.044932 6761400.0 565.61 594.38 769.67 517.58 413.07 449.84 512.71 297.43 375.23 649.98 525.1 True False 623.0303108199254 644.4704885767911 821.9044346016965 549.5497410905333 384.0573882141393 446.1766521839765 532.2214596156775 291.4975253206788 359.46038799747424 608.9401518737191 460.51602888315455 1.3528960378011188 1.3994528923124863 1.7847466386674589 1.193334665078442 0.8339718145002616 0.9688623722089458 1.155706699083685 0.6329801940393255 0.780559992383412 1.3222995806476558 1.0 8.847107561917152 -6.536010802640011 4.431777179723982 0.8973543734317116 1.5033183172415374 0.57335205381294 0.20582702375655945 0.07750602954525937 3.7444163761898484 0.0238687069419535 0.053259433053438394 2.910644717795699e-07 6.536010802640011 0.6059639438098258 GS(ph)PVTTREPTPR ddPTM_A549_MK2206_60min_R1 2 GSPVTTREPTPR 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GS(0.995)PVT(0.003)T(0.002)REPTPR;GS(0.999)PVT(0.001)TREPTPR 92.06299999999999 7.4758e-05 55316000.0 2183.34 2361.6000000000004 2046.2800000000002 1729.81 2890.2 2348.8 2206.6400000000003 2166.9 3248.8 3136.3 3540.8 True False 2551.8344144619878 2481.7953527908367 2336.473273681756 2153.613527654121 2465.0554086247894 2597.3484569927436 2607.557924789192 2474.0647108529333 2512.9519872675373 2427.80765174505 2661.5216388914096 0.9587877765761433 0.9324723558605245 0.8778712295778874 0.8091662664637042 0.9261827417084412 0.9758885364819369 0.9797244879343927 0.9295677610509465 0.9441786797999676 0.9121878313025074 1.0 11.378035580474394 -7.046994809163098 5.665264725474546 0.9695181881741917 0.8928120033409641 0.29635403372403524 0.04242783421185322 0.1541775036410681 12.01942799168488 0.006310023060545166 0.011202362937226599 8.974395209422231e-08 7.046994809163098 -0.07670618483322755 GS(ph)PVTTREPTPR ddPTM_A549_PD325901_60min_R1 2 GSPVTTREPTPR 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GS(0.973)PVT(0.019)T(0.006)REPT(0.001)PR;GS(0.974)PVT(0.01)T(0.012)REPT(0.003)PR 73.80199999999999 0.00038468 69566000.0 6149.1 6599.5 5658.5 5922.1 6759.5 6202.9 6024.9 7160.5 6406.4 6634.1 7522.4 True False 6773.352105271832 7155.663025947268 6042.5198373246985 6287.894666935058 6284.736039009058 6152.38563896494 6254.180866451781 7017.67821019642 6137.161286856113 6215.2217938174135 6597.192488422471 1.026702209638192 1.0846527577457936 0.9159229244756497 0.9531167504919396 0.9526379668379014 0.9325763420973194 0.9480064250705664 1.0637370703540736 0.9302686404294441 0.9421010232344464 1.0 12.687636484170817 -5.753665054114284 24.998789588486563 0.9648817080701628 1.0556774983811603 0.44566959131214046 0.04091626375577024 125.75546332464322 404363.26742039406 0.005727520730987068 0.02138218355056804 1.7633354794485732e-06 5.753665054114284 0.09079579031099749 GS(ph)RGPGNPLDHQITNER ddPTM_A549_MK2206_60min_R1 4 GSRGPGNPLDHQITNER 17 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 GS(1)RGPGNPLDHQITNER;GS(1)RGPGNPLDHQITNER;GS(1)RGPGNPLDHQITNER;GS(1)RGPGNPLDHQITNER 142.42 9.2975e-17 96111000.0 5262.67 5447.57 4578.860000000001 4740.7300000000005 6753.59 5425.88 4824.459999999999 4872.860000000001 8093.05 8054.58 7975.57 True False 6150.880036071648 5724.828044547242 5228.211199801813 5902.209062819457 5760.145857426575 6000.043020192351 5701.0019331782505 5563.602827507882 6259.987096945195 6235.0447838512455 5995.015854465984 1.025998960701589 0.9549312601538049 0.8720929730164199 0.9845193417499654 0.9608224560633242 1.000838557536528 0.9509569401607657 0.928038050702281 1.0441985891132917 1.040038080834507 1.0 12.54954785366926 -8.765510223327349 24.999975135855152 1.020871556884849 0.9586252377549873 0.3728827302251365 0.03912626138798679 86.01429123114121 528231.6704952823 0.006862398427915966 0.0074339983700289864 1.7158913174247101e-09 8.765510223327349 -0.06224631912986167 GS(ph)RGPGNPLDHQITNER ddPTM_A549_PD325901_60min_R1 4 GSRGPGNPLDHQITNER 17 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 GS(1)RGPGNPLDHQITNER;GS(1)RGPGNPLDHQITNER;GS(1)RGPGNPLDHQITNER;GS(1)RGPGNPLDHQITNER 147.0 8.502399999999999e-17 156111000.0 13342.099999999999 12010.7 13538.0 14627.6 14454.4 16176.7 14724.2 14104.5 16681.399999999998 14647.7 18197.0 True False 14696.580170065108 13022.883840555322 14456.770090607364 15531.113630310061 13439.17280897294 16044.962318567796 15284.537488391392 13823.174682733794 15980.338769131113 13722.841722207886 15958.8843602871 0.9209027296818333 0.8160272075761216 0.9058759850771477 0.9731954489850477 0.8421122996802748 1.0053937328159916 0.9577447359933388 0.8661742494439075 1.0013443551792005 0.8598872836221875 1.0 13.962072179973202 -7.429030964329309 0.3275016926338845 1.0111407346392127 0.8547337690054595 0.0 0.07001105984450064 1.4056641552696236 0.29454477440123833 0.026620772025153734 0.07885347227558015 3.723651564160351e-08 7.429030964329309 -0.15640696563375323 GS(ph)SAGFDR ddPTM_A549_PD325901_60min_R1 2 GSSAGFDR 8 0 G3V4S5;G3V2S7;G3V3U4;G3V3I1;G3V295;G3V5Z7;P60900 G3V4S5 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 1 GS(0.581)S(0.419)AGFDR;GS(0.666)S(0.334)AGFDR 57.858999999999995 0.015816999999999998 6200500.0 1956.49 1865.9299999999998 1800.54 1853.04 2090.8 1669.73 1694.02 1890.46 1693.08 2162.56 2291.8999999999996 True False 2155.111424508186 2023.1784695819053 1922.7354719265913 1967.4980722408175 1943.9494208684284 1656.1322724772178 1758.4868581033122 1852.7532922628197 1621.9257354442973 2026.015592535201 2010.0108295511347 1.0721889617825862 1.0065510293960511 0.9565796580090898 0.9788494884279748 0.9671338045987251 0.8239419649530231 0.8748643700074036 0.9217628407885579 0.806923879015367 1.0079625257480032 1.0 10.972987559050186 -5.766021768471056 0.7930755198363224 0.9021561768459534 1.09520493058495 0.36566125233153957 0.06255660680798597 1.284714444054454 0.8791613829644402 0.012132361750049232 0.18633911055009733 1.7138713996819493e-06 5.766021768471056 0.19304875373899666 GS(ph)SDDEEESR ddPTM_A549_PD325901_60min_R1 1 GSSDDEEESR 10 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 GS(0.5)S(0.5)DDEEESR 125.74 1.1815999999999998e-05 10154000.0 251.94 428.24 514.05 410.72 621.69 231.64 262.39 373.38 367.74 336.75 495.06 True False 277.5167633315745 464.3292877084107 548.9365242337656 436.0892415872019 578.024639114068 229.75360063999716 272.37539503531735 365.93264298905643 352.2851666502977 315.48754752988526 434.17075844390484 0.6391880566213439 1.0694623686141276 1.2643332457514835 1.0044187295113403 1.3313301918022864 0.5291779701227426 0.6273462450846018 0.8428311577237074 0.8113977272741946 0.7266439330474773 1.0 8.762118752971961 -7.250487840319786 24.982436006668856 0.8556958831258132 1.070245090645498 0.28271284199259583 0.21199121579741048 976.436212551325 2227426.6796727097 0.03204651000205335 0.05516316077360518 5.61710005284496e-08 7.250487840319786 0.21454920751968487 GS(ph)SEEDEDAR ddPTM_A549_PD325901_60min_R1 2 GSSEEDEDAR 10 0 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 GS(0.554)S(0.446)EEDEDAR;GS(0.5)S(0.5)EEDEDAR 68.893 0.0038710999999999997 10299200.0 331.17999999999995 448.18 336.14 525.8 481.19 357.86 387.11 310.42999999999995 265.006 415.14 336.51 True False 364.80114979816955 485.9497014878468 358.9524817740255 558.2774718215585 447.3928744153813 354.9457068081048 401.84168288472 304.238230122376 253.8687194031891 388.9279895517642 295.1214033126457 1.236105364447954 1.6466094835319056 1.2162875269123006 1.8916875074293764 1.5159621409817647 1.2027108262022 1.361614841804669 1.0308917845584793 0.8602179189770442 1.3178576178690153 1.0 8.205164744002031 -8.040382849975039 1.3309409222221782 0.9320170241607862 1.4968052800755327 0.38698312607794105 0.22362318953701915 0.1870802295049695 0.6592133968330026 0.032602451830329275 0.046504858550513235 9.11207215351211e-09 8.040382849975039 0.5647882559147465 GS(ph)SEEDEDARTPDR ddPTM_A549_MK2206_60min_R1 1 GSSEEDEDARTPDR 14 1 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 GS(0.5)S(0.5)EEDEDARTPDR 58.09 0.0030125 10699000.0 187.99 221.83 351.75 347.98 466.16 274.52 134.87 308.21 277.58 314.13 447.6 True False 219.71811608577195 233.12019948746237 401.6334392251102 433.2351156214157 397.5884815184179 303.5695241883721 159.3741332144428 351.89971135353846 214.70857320417466 243.1678148272401 336.4485668684464 0.6530511279356502 0.6928851017475545 1.1937439441736468 1.287671157745824 1.1817214298727496 0.9022761696205108 0.4736953844025709 1.0459242392645816 0.6381616518762796 0.722748850115686 1.0 8.394242165649777 -7.518639394309944 24.983536237230584 0.8145144516962434 1.014275817755584 0.16312425020473542 0.2359509527034328 309.2717596066078 1822616.5627489968 0.039234349004390316 0.058987956819259925 3.029427794586893e-08 7.518639394309944 0.19976136605934058 GS(ph)SFQSGRDDTWR ddPTM_A549_MK2206_60min_R1 1 GSSFQSGRDDTWR 13 1 Q96KP1 Q96KP1 EXOC2 Exocyst complex component 2 1 GS(0.498)S(0.498)FQS(0.005)GRDDTWR 97.235 4.5722e-05 19115000.0 1685.9 1311.3 1606.2 1434.1 2673.5 1757.1 1710.1 1477.7 2160.7 2358.1 2769.1 True False 1970.4387037023407 1378.0395689848508 1833.9833122483906 1785.4545643791955 2280.231691564034 1943.0351557314157 2020.8030341070566 1687.1685002664553 1671.304899928887 1825.4035722284232 2081.4560467279157 0.9466636140599288 0.6620555697782581 0.8811059523122977 0.8577911444183318 1.09549836286411 0.9334980475739086 0.9708602962257086 0.8105712839426578 0.8029498881594 0.876983962787967 1.0 11.023377378649622 -11.057836276449468 1.3932947454059104 0.9994054222841802 0.8752255598564646 0.0 0.11079304111079596 0.6672694531318157 2.3288288542684645 0.07620267248042362 0.01728521904700006 8.753136952758197e-12 11.057836276449468 -0.12417986242771561 GS(ph)SFQSGRDDTWR ddPTM_A549_PD325901_60min_R1 2 GSSFQSGRDDTWR 13 1 Q96KP1 Q96KP1 EXOC2 Exocyst complex component 2 1 GS(0.552)S(0.447)FQS(0.001)GRDDTWR;GS(0.553)S(0.444)FQS(0.003)GRDDTWR 88.385 5.3303e-05 49421000.0 5916.9 6054.8 5293.9 6338.9 5402.7 6589.799999999999 5742.5 6216.9 7723.5 7488.5 8386.9 True False 6517.57933220844 6565.05924532245 5653.1758888067925 6730.439456313581 5023.232990303167 6536.13485364123 5961.033979916575 6092.899052436294 7398.908154194745 7015.674832004597 7355.364468939494 0.8860987595830384 0.8925539003601556 0.7685786221307228 0.9150381989546719 0.6829346134396822 0.8886214790908408 0.8104335284932582 0.8283612699500635 1.0059199901567255 0.9538174296638391 1.0 12.844581115537684 -8.761653368796289 24.99081909865951 1.0027955609140387 0.8325340372310417 0.5214991529390132 0.06453812527048083 2.5117888392265573 293331.7810863627 0.009820747871580287 0.010781402337478192 1.731197559537719e-09 8.761653368796289 -0.17026152368299696 GS(ph)SMGVRNSPQALR ddPTM_A549_MK2206_60min_R1 1 GSSMGVRNSPQALR 14 1 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 GS(0.38)S(0.349)MGVRNS(0.271)PQALR 43.023999999999994 0.017006999999999998 22412000.0 1535.6 1883.0 1497.8 985.47 1846.8 1240.8 1115.2 822.97 1670.7 2230.5 2326.4 True False 1794.7717381845387 1978.8366570567182 1710.210562249808 1226.9101942394293 1575.1381664411665 1372.1006324236196 1317.8174046173847 939.6285177399226 1292.2891175596758 1726.6285008504726 1748.6906746263494 1.026351752329231 1.131610459053626 0.9779949004504392 0.7016164791417949 0.9007528828834942 0.7846445642633753 0.7536023515988434 0.5373326062602223 0.7390038365909426 0.9873836041468049 1.0 10.772059398592978 -6.030784938715345 5.936263139681618 0.8270957157083337 1.0747864170623824 0.42076441713719515 0.1284038984669606 0.15586654853602 17.273248764281583 0.02069435380301453 0.05837376290403776 9.315690713908672e-07 6.030784938715345 0.2476907013540487 GS(ph)SPGIQDTLEAEDGAFETDEAPEDR ddPTM_A549_MK2206_60min_R1 2 GSSPGIQDTLEAEDGAFETDEAPEDR 26 0 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 GS(0.5)S(0.5)PGIQDTLEAEDGAFETDEAPEDR;GS(0.48)S(0.48)PGIQDT(0.04)LEAEDGAFETDEAPEDR 124.82 3.4172000000000002e-18 6653300.0 206.6 369.5 492.23 252.38 343.09000000000003 357.42 504.68 568.49 603.25 581.3199999999999 541.62 True False 241.46902911495545 388.3059717378954 562.0356156070384 314.21311132976876 292.62191548857476 395.24194716380555 596.3738233162672 649.0751984276081 466.61483819229903 449.9994082557257 407.12080604845386 0.5931139492935097 0.9537856232571931 1.3805131235178072 0.7717933022867233 0.7187594226116464 0.9708222750884549 1.4648571491708269 1.594306134160969 1.1461336076662327 1.1053215693480638 1.0 8.66931314256167 -7.5394973999357875 24.989326341313514 1.148649582329089 0.9024784482016934 0.30097817991979436 0.2523101609694129 349.3840486966444 525364.0104072272 0.0421636961758761 0.06254756708080962 2.887371065449743e-08 7.5394973999357875 -0.24617113412739555 GS(ph)SPGIQDTLEAEDGAFETDEAPEDR ddPTM_A549_PD325901_60min_R1 2 GSSPGIQDTLEAEDGAFETDEAPEDR 26 0 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 GS(0.498)S(0.498)PGIQDT(0.005)LEAEDGAFETDEAPEDR;GS(0.499)S(0.499)PGIQDT(0.002)LEAEDGAFETDEAPEDR 93.397 3.4550999999999998e-09 13594500.0 216.31 144.61 423.37 197.3 334.5 334.57 261.02 632.72 319.49 285.78 0.0 True False 238.26963196099427 156.79679220883912 452.1024341306278 209.48677289918894 311.00587396235386 331.84537284632995 270.9532589356246 620.0999032407622 306.062946356403 267.73580202848007 0.0 0.0 GS(ph)SPGPRPVEGTPASR ddPTM_A549_MK2206_60min_R1 2 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 GS(0.5)S(0.5)PGPRPVEGTPASR;GS(0.5)S(0.5)PGPRPVEGTPASR 123.29 4.7963e-08 30875000.0 1733.27 1958.47 1493.9299999999998 1307.78 2029.49 1775.6399999999999 1331.31 1603.27 2287.1800000000003 2804.8 2999.6 True False 2025.8036016170322 2058.1477576982857 1705.7917380570525 1628.1861587084752 1730.9547094491459 1963.5370462255594 1573.1917942442342 1830.5384323084518 1769.1373818759434 2171.193731981799 2254.7165352515467 0.898473741574359 0.9128188512923949 0.7565437656520075 0.7221245479209772 0.767703914166768 0.8708576069437031 0.6977337371008908 0.8118707623281027 0.7846384918974173 0.9629564062870415 1.0 11.138730352780108 -10.66056837661678 0.8192479932817518 1.006563087263104 0.7994740677877064 0.5148833179873318 0.06651067769785231 0.4145994438168625 0.47100948293008926 0.05414522967177164 0.012756411004748839 2.1849002953616394e-11 10.66056837661678 -0.2070890194753976 GS(ph)SPGPRPVEGTPASR ddPTM_A549_PD325901_60min_R1 1 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 GS(0.497)S(0.497)PGPRPVEGT(0.005)PASR 54.637 0.0037984000000000004 10351000.0 1984.0 1924.5 2015.3 2242.7 2038.1 2082.9 1727.2 2080.7 2183.6 2595.3 2609.4 True False 2185.414219456394 2086.6843690333385 2152.070376983381 2381.2264854587484 1894.9508870632978 2065.937552983294 1792.9295411601056 2039.1988062224268 2091.8308856735475 2431.4323150833297 2288.460342349462 0.9549714185620212 0.911828940365657 0.9404009923868485 1.0405364870837341 0.8280461985711471 0.9027631000423135 0.7834654190770829 0.8910789356868954 0.9140778395687454 1.062475180403207 1.0 11.160161575774136 -10.322757268906503 0.9207903900523049 0.9950725317351354 0.9069065696143322 0.31244310016017907 0.06619709829110756 0.6221215722914756 1.0201412723788523 0.03167154454468019 0.012115849308307962 4.7560096933367764e-11 10.322757268906503 -0.08816596212080319 GS(ph)SPSIRPIQGSQGSSSPVEK ddPTM_A549_PD325901_60min_R1 1 GSSPSIRPIQGSQGSSSPVEK 21 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GS(0.82)S(0.16)PS(0.011)IRPIQGS(0.003)QGS(0.003)S(0.001)S(0.001)PVEK 42.106 0.019886 5631000.0 2419.2 2546.1 2412.3 3103.6 3331.2 2816.1 3098.4 2996.8 3224.6 3235.4 3452.3 True False 2664.795403079088 2760.6687825387266 2576.0131843383165 3295.3023232129894 3097.2280040161236 2793.16661527498 3216.311307509538 2937.0264730558793 3089.081275848562 3031.11629184318 3027.6889859328016 0.8801417237570358 0.9118072547627251 0.8508182961681158 1.0883886484125578 1.022967688691412 0.9225407986925157 1.0622991074886192 0.9700555396217521 1.0202769472693531 1.0011319874420068 1.0 11.564001299266614 -6.248252420317632 24.99722032105888 1.009671492317389 0.8840109015005612 0.6428610728040504 0.04314070865692355 351.53139562610903 666362.4663965978 0.0054752376299630435 0.014383501034418149 5.646087179653873e-07 6.248252420317632 -0.1256605908168279 GS(ph)SRQGS(ph)PGSVSK ddPTM_A549_MK2206_60min_R1 1 GSSRQGSPGSVSK 13 1 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 2 GS(0.504)S(0.504)RQGS(0.967)PGS(0.024)VS(0.001)K 61.648 0.0021721 40173000.0 3701.9 3910.3 4106.6 3230.9 3095.7 2304.6 1942.0 1733.7 4106.8 5644.1 5818.3 True False 4326.690217234531 4109.3175677583 4688.977630481413 4022.470645040613 2640.326630848992 2548.4712423303295 2294.8362623448343 1979.4572842335733 3176.616357211991 4369.09389000231 4373.455533089101 0.9893070100974507 0.939604286968883 1.0721448051786753 0.9197465515785005 0.6037163544644643 0.5827134226125923 0.5247192397367131 0.45260715908901084 0.7263401521241152 0.9990027009412143 1.0 12.09455791003093 -2.094513722497031 11.099355386651041 0.8150457218395291 1.1155728550618553 0.0 0.21598622539431986 0.0 0.0 0.031301582272996814 0.0 0.008044263305171565 2.094513722497031 0.30052713322232627 GS(ph)SRQGS(ph)PGSVSK ddPTM_A549_PD325901_60min_R1 2 GSSRQGSPGSVSK 13 1 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 2 GS(0.51)S(0.514)RQGS(0.899)PGS(0.069)VS(0.009)K;GS(0.548)S(0.548)RQGS(0.814)PGS(0.079)VS(0.011)K 46.876999999999995 0.010405 119774000.0 9787.2 9542.5 9305.5 10940.2 12027.900000000001 12904.2 11684.4 13568.0 12757.2 11576.8 12744.7 True False 10780.789339044168 10346.679964406663 9937.027188517277 11615.951307003073 11183.101798002384 12799.11247357387 12129.056235949016 13297.375596109905 12221.059248358017 10845.838872290946 11177.182695309724 0.9645354856343276 0.9256965951490115 0.8890457872436089 1.039255743030618 1.0005295701836514 1.1451107870809658 1.085162206486857 1.189689384042177 1.0933935305080353 0.9703553362192228 1.0 13.448268969903202 -6.467012450545228 2.4278775246617097 1.0649892245439556 0.9266607305182719 0.4838892323231998 0.06359214635323635 0.20905595964923715 2.417366608543027 0.009620782558052246 0.025001713476160748 3.411831302936755e-07 6.467012450545228 -0.1383284940256837 GS(ph)SSDEEGGPK ddPTM_A549_MK2206_60min_R1 2 GSSSDEEGGPK 11 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GS(0.994)S(0.002)S(0.003)DEEGGPK;GS(0.974)S(0.026)SDEEGGPK 132.32 7.619799999999999e-08 5065600.0 2748.0 3054.5 2617.2 2023.92 952.5799999999999 406.33 674.22 499.64 899.78 3554.5 4324.4 True False 3211.795217850423 3209.9610031756483 2988.358314541458 2519.7804908572225 812.4567438750959 449.3275708999754 796.7170467549612 570.465500083326 695.981266653406 2751.535981292537 3250.5321326316125 0.9880829005219436 0.9875186191674045 0.9193443388981668 0.7751901498100935 0.24994576602364962 0.13823200404304337 0.245103575121389 0.17549911116290992 0.21411302465419516 0.8464878576865226 1.0 11.66646020042355 -6.546624147730695 5.347103475220856 0.496565187554845 0.9513971743712082 0.4351555225199242 0.2723689137342109 0.20044349189720626 16.316825546110188 0.05288134227328692 0.11455102158958722 2.840376116974701e-07 6.546624147730695 0.45483198681636317 GS(ph)SSDEEGGPK ddPTM_A549_PD325901_60min_R1 2 GSSSDEEGGPK 11 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 GS(0.997)S(0.003)SDEEGGPK;GS(0.976)S(0.024)SDEEGGPK 170.04 4.7490000000000005e-15 10716200.0 2740.9 2672.5 1893.54 2302.65 2743.5 2034.3600000000001 1964.73 2447.7 2385.8999999999996 2309.31 2364.3 True False 3019.154150256063 2897.7209541395664 2022.0470111810212 2444.8794608024195 2550.806024561191 2017.792846649908 2039.4988752915094 2398.878703316496 2285.6289201907457 2163.4997724906902 2073.5060885325506 1.456062351084178 1.3974981651442 0.9751825771642909 1.1791040664523416 1.2301897923851441 0.9731309002704344 0.9835991736753913 1.156919054437991 1.1023015234106774 1.0434016974706977 1.0 11.017856568164857 -5.7130001850243985 7.144352868714214 1.064374133322066 1.43279377773293 0.7215800694312065 0.08505340841157677 0.08204849953800603 9.532931755462396 0.01207050651009895 0.04688709856484307 1.9364211389643708e-06 5.7130001850243985 0.36841964441086406 GS(ph)VLQEAKL ddPTM_A549_MK2206_60min_R1 2 GSVLQEAKL 9 1 Q8WTV0-3;Q8WTV0-4;B7ZKQ9;Q8WTV0-2 Q8WTV0-3 SCARB1 1 GS(1)VLQEAKL;GS(1)VLQEAKL 57.348 0.010989 2051770.0 1169.77 1406.7 1537.8400000000001 1200.75 1917.5500000000002 1534.46 1040.9 1259.39 1587.67 2297.9 2335.5 True False 1367.19857786932 1478.2950214985042 1755.928836326775 1494.9338039037154 1635.4809351631259 1696.8355387078889 1230.0180563721628 1437.9123892201187 1228.0652799880113 1778.8027940391385 1755.5308934791262 0.7787949405776585 0.8420786139335927 1.0002266794900203 0.8515565345256003 0.9316161516940985 0.9665654674667021 0.7006530394543513 0.819075525563923 0.6995406828496313 1.0132563321138097 1.0 10.777691669360939 GS(ph)VLQEAKL ddPTM_A549_PD325901_60min_R1 2 GSVLQEAKL 9 1 Q8WTV0-3;Q8WTV0-4;B7ZKQ9;Q8WTV0-2 Q8WTV0-3 SCARB1 1 GS(1)VLQEAKL;GS(1)VLQEAKL 94.616 0.00075799 3125100.0 2001.13 2829.2 2302.8 1818.63 3044.0 2832.6 2348.3 3181.4 2956.7 2749.2 3179.8999999999996 True False 2204.2832444459564 3067.626613078263 2459.0818558613255 1930.962644691598 2830.199941229911 2809.532244745538 2437.665841539067 3117.944481239981 2832.4401812012175 2575.6150428185933 2788.792459046927 0.7904077757006245 1.0999838310401298 0.8817729866860439 0.6924009846725944 1.0148478177530411 1.0074368336845327 0.8740936722025353 1.1180267183831751 1.0156511188248147 0.9235592395781265 1.0 11.445424858166065 GS(ph)VSQPSTPSPPKPTGIFQTSANSSFEPVK ddPTM_A549_MK2206_60min_R1 1 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK 30 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GS(0.258)VS(0.223)QPS(0.052)T(0.207)PS(0.258)PPKPT(0.002)GIFQTSANSSFEPVK 84.23100000000001 8.229399999999999e-07 11431000.0 701.29 947.25 1024.7 762.27 1067.4 569.7 921.33 912.95 1526.7 1037.0 1294.6 True False 819.650607105649 995.4609789681234 1170.017868298423 949.026184219601 910.3868739762302 629.9852758637463 1088.7237351113117 1042.3634582921156 1180.904887638928 802.7409797722214 973.1150908576648 0.842295649102761 1.0229632530832133 1.2023427437213168 0.9752455728367826 0.9355387482212937 0.647390305404166 1.1188026425032152 1.0711615389433722 1.213530546112614 0.8249188480518965 1.0 9.926466633209001 GS(ph)YGDLGGPIITTQVTIPK ddPTM_A549_MK2206_60min_R1 2 GSYGDLGGPIITTQVTIPK 19 0 P61978-3;P61978;P61978-2;Q5T6W2;S4R359 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK 270.95 3.533899999999999e-111 10785100.0 3633.8 5343.5 4987.4 4937.5 6212.6 4737.8 5528.1 5996.700000000001 7670.200000000001 6399.8 6785.4 True False 4247.0966021196755 5615.461326066152 5694.688314971751 6147.187721652795 5298.7347697814575 5239.150851302891 6532.484213114568 6846.750589123539 5932.911946792499 4954.080735145866 5100.397912486945 0.8326990707375611 1.100984947138774 1.1165184388907867 1.205236890753772 1.0388865458534007 1.027204336053124 1.28077932843662 1.3423953790666256 1.1632253107678852 0.9713125956343797 1.0 12.31639408938894 -5.260962404308334 4.993679110841722 1.1142929273889237 0.8186759739182486 0.3582611642337009 0.11167973248807055 0.15880376551530972 12.211050575130011 0.016256250382623877 0.16149655755355877 5.483244298203744e-06 5.260962404308334 -0.29561695347067507 GS(ph)YGDLGGPIITTQVTIPK ddPTM_A549_PD325901_60min_R1 2 GSYGDLGGPIITTQVTIPK 19 0 P61978-3;P61978;P61978-2;Q5T6W2;S4R359 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK 281.5 1.9570999999999994e-126 34753000.0 7249.799999999999 7771.3 8220.900000000001 7305.1 10341.2 7918.8 8266.4 8412.7 8854.2 7333.5 8558.4 True False 7985.794358979316 8426.214724379724 8778.819710287646 7756.319435914169 9614.869787203275 7854.311918269772 8580.982375547648 8244.90209886452 8482.088765309913 6870.4615584570565 7505.771056167562 1.0639538961713086 1.1226314606886156 1.1696093105683003 1.033380764996919 1.2809969442516698 1.0464363833500905 1.1432512810921105 1.0984750317010545 1.130075604736185 0.915357197420981 1.0 12.873784569935063 -10.751103423810047 0.6554555010694276 0.9844810853099424 1.1245155204149095 0.4249952531645005 0.06963361301897986 0.8655343524801727 0.5424281471415255 0.07004389852775858 0.011844661751685283 1.7737670219447256e-11 10.751103423810047 0.14003443510496716 GS(ph)YREHYR ddPTM_A549_MK2206_60min_R1 2 GSYREHYR 8 1 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 GS(0.897)Y(0.103)REHYR;GS(0.937)Y(0.063)REHYR 73.931 0.0014276 11043600.0 1923.06 1539.89 1683.0900000000001 1397.56 2075.85 1748.05 1501.1399999999999 1495.31 1996.02 1990.75 2261.5 True False 2247.625513697028 1618.2638235980185 1921.7774704346552 1739.9622627388517 1770.4952148618665 1933.0274907383207 1773.877706929107 1707.2747716948181 1543.9246569889654 1541.0381923640794 1699.907135775226 1.322204881899046 0.951971898664938 1.1305190913021537 1.0235631265500624 1.0415246677898375 1.1371371118203952 1.0435144777012466 1.004334140238921 0.9082405882630016 0.906542575139732 1.0 10.731240220192156 -8.26346932289435 2.479585083293447 0.9570360726282505 1.0890265157200456 0.35878528626278994 0.09138568556656299 0.25469533579992315 3.0905141295696725 0.01427576178013967 0.018219274084804234 5.451684031964713e-09 8.26346932289435 0.13199044309179508 GS(ph)YREHYR ddPTM_A549_PD325901_60min_R1 2 GSYREHYR 8 1 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 GS(0.902)Y(0.098)REHYR;GS(0.995)Y(0.005)REHYR 64.73 0.0031414000000000004 6339400.0 1755.5 1582.3 1226.4 1223.4 1464.2 1480.5 1332.4 1250.1 1180.6 1564.5 1838.0 True False 1933.7170676692044 1715.6459740823332 1309.6308789423015 1298.9666394570088 1361.3596432157804 1468.4432988582103 1383.1052111172562 1225.1657748155214 1130.9834876470914 1465.7172030007596 1611.937652041969 1.1996227429886088 1.0643376757835445 0.8124575273015606 0.805841738240623 0.8445485726394184 0.9109802088176406 0.8580389008006404 0.7600577933417629 0.7016297970423268 0.909289016944309 1.0 10.65458022776531 -5.6004832552345265 3.421724400270799 0.8464078351922624 1.1802596884079697 0.6876812373235198 0.07669797370067394 0.13732854491008809 3.057846260914835 0.015206344247747453 0.07788023768734904 2.5090929188076745e-06 5.6004832552345265 0.3338518532157073 GSADRNS(ph)PSPSSVASSDSGSTDEIQDEFER ddPTM_A549_MK2206_60min_R1 1 GSADRNSPSPSSVASSDSGSTDEIQDEFER 30 1 Q5TF58;H0Y4W3;J3KNZ4 Q5TF58 IFFO2 Intermediate filament family orphan 2 1 GS(0.183)ADRNS(0.237)PS(0.116)PS(0.116)S(0.116)VAS(0.116)S(0.116)DS(0.001)GSTDEIQDEFER 54.703 0.0014896 1766000.0 300.81 358.78 239.6 216.76 348.84 409.38 293.4 245.0 344.56 300.87 535.11 True False 351.579373901596 377.04036952671754 273.57888283819864 269.86620973072615 297.5260981055538 452.700319875549 346.706982168885 279.72950028103236 266.5177101492558 232.90325803671004 402.2274187153134 0.8740810734000091 0.9373810734508315 0.6801597059494122 0.6709294224462873 0.7396962122965949 1.125483492203099 0.8619675487967559 0.6954510987203932 0.662604531039915 0.5790337684601089 1.0 8.651867619245786 GSADYNSLS(ph)EEER ddPTM_A549_MK2206_60min_R1 1 GSADYNSLSEEER 13 0 Q96CW6 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 1 GSADYNS(0.022)LS(0.978)EEER 100.11 0.00015514 1902200.0 1052.9 1443.9 1378.9 1370.1 1706.8 1619.9 1217.5 1372.9 1697.9 1876.4 2006.6 True False 1230.6037790664886 1517.3883426044572 1574.4487543639061 1705.7745615061267 1455.7319809842884 1791.3167427974054 1438.7039904247365 1567.5127793299157 1313.3283609891496 1452.5199367836035 1508.3058406573377 0.8158847800590474 1.0060216580101295 1.0438524548030275 1.1309208752799962 0.9651437670955799 1.1876349573881702 0.9538542858109812 1.0392539344983076 0.870730806436966 0.9630141962127375 1.0 10.558713279622651 -8.736096504037244 24.96692416031033 0.938956200579409 1.023837619714151 0.10186195945718757 0.09525035319890103 329.35299863931664 324467.09805399185 0.016359164965766476 0.018546171011699503 1.8361302937826113e-09 8.736096504037244 0.08488141913474201 GSAITGPVAK ddPTM_A549_MK2206_60min_R1 1 GSAITGPVAK 10 0 J3KTJ3;P62829 J3KTJ3 RPL23 60S ribosomal protein L23 0 126.07 2.6002e-05 4476100.0 2906.9 2881.4 3194.9 2801.7 3861.3 2913.3 2600.1 2756.8 4448.6 3745.5 4034.0 False True 3397.513653118414 3028.0509525455277 3647.9848613512536 3488.116625773091 3293.307885033179 3221.5834723079706 3072.5045137604557 3147.5848423459183 3440.9992029544323 2899.3889486372755 3032.246467263882 1.120460915627392 0.9986163675137727 1.203063438521532 1.150340733654332 1.0860950521627166 1.0624411660094817 1.013276640580243 1.0380372691755861 1.13480194967772 0.956185118834852 1.0 11.566171308173708 -7.032853604023613 4.27414349807356 1.0589997943667895 1.1160860487712398 0.23029010905512926 0.06392916878021453 0.3392559109786442 14.063126735157816 0.009781013695456607 0.01790576583168739 9.27142300359819e-08 7.032853604023613 0.057086254404450365 GSAITGPVAK ddPTM_A549_PD325901_60min_R1 2 GSAITGPVAK 10 0 J3KTJ3;P62829 J3KTJ3 RPL23 60S ribosomal protein L23 0 ; 136.57 1.4285e-06 12306600.0 7138.5 7156.2 6851.1 7278.3 8869.3 8474.4 8931.3 8190.6 7920.3 8819.2 9640.0 False True 7863.195264914048 7759.278088686088 7316.056845011091 7727.864060781388 8246.350965423931 8405.38729607836 9271.185508894881 8027.2320575986 7587.43733458518 8262.354206905917 8454.341112994874 0.9300778333663168 0.9177862573772392 0.8653609722188562 0.9140705298610623 0.9753984201972583 0.9942096236404194 1.0966183390263806 0.9494805036030802 0.8974605156305786 0.9772913224670032 1.0 13.0454766075936 -6.695317523618922 5.521462447547234 0.9661736772831098 0.9035803803544722 0.3287724630808091 0.049140927360547815 0.2669213099646199 15.335602846507921 0.008535212152865186 0.017866980656402777 2.0168912245892813e-07 6.695317523618922 -0.06259329692863758 GSALDDAVNPLHENGDDS(ph)LSPR ddPTM_A549_MK2206_60min_R1 2 GSALDDAVNPLHENGDDSLSPR 22 0 Q9BVI0 Q9BVI0 PHF20 PHD finger protein 20 1 GSALDDAVNPLHENGDDS(0.549)LS(0.451)PR;GSALDDAVNPLHENGDDS(0.608)LS(0.392)PR 66.012 0.00029255 2869300.0 1594.8899999999999 2167.0 1895.7 2018.4499999999998 2747.63 2698.3999999999996 1764.01 2359.3 3275.3999999999996 2696.7 3196.3 True False 1864.0684406832104 2277.29104399464 2164.538765427267 2512.9703406116637 2343.457266763451 2983.9428969470464 2084.5077832847132 2693.7380000532225 2533.527129739009 2087.5135970605106 2402.5704966077187 0.7758642018268184 0.9478560763191067 0.9009262240102683 1.0459507199309335 0.9753958396110617 1.241979330537934 0.8676156584074888 1.12118999374071 1.0545068847370735 0.8688667408544103 1.0 11.230363048070776 -5.072350019034006 0.8384461598971866 1.0351761495866938 0.5785999060179978 0.30688889731544655 0.10434355797930106 2.0857798456830747 0.8635388290242404 0.0127826660020572 0.9452993961036695 8.465448674695614e-06 5.072350019034006 -0.45657624356869597 GSALGDLAPSRPPS(ph)FSPCPAEDLFPGHR ddPTM_A549_MK2206_60min_R1 2 GSALGDLAPSRPPSFSPCPAEDLFPGHR 28 1 O75427 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 GSALGDLAPS(0.098)RPPS(0.451)FS(0.451)PCPAEDLFPGHR;GSALGDLAPS(0.111)RPPS(0.444)FS(0.444)PCPAEDLFPGHR 63.115 0.00028746 4432000.0 642.14 670.63 705.0699999999999 744.25 840.74 791.69 637.51 829.75 826.22 675.02 981.99 True False 750.5175331843054 704.7622025076722 805.0595280581325 926.5912834106522 717.0682597215438 875.46611031871 753.3373149368982 947.3696035028025 639.082489202224 522.5325131782497 738.134781454749 1.0167757326177638 0.9547879604300659 1.0906673798401496 1.2553144854988199 0.9714597899157571 1.1860518326928073 1.0205958774252413 1.2834642497616549 0.8658073095305056 0.7079093497645772 1.0 9.527740462405106 -8.795662989143947 24.99998296263596 0.9366312271219451 1.0938745575693962 0.37486442603432035 0.12703041754125025 160.39784916963745 117168.22470346175 0.018586979113804265 0.019787814482485035 1.6007997612514598e-09 8.795662989143947 0.1572433304474511 GSALGDLAPSRPPSFS(ph)PCPAEDLFPGHR ddPTM_A549_PD325901_60min_R1 2 GSALGDLAPSRPPSFSPCPAEDLFPGHR 28 1 O75427 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 GSALGDLAPS(0.032)RPPS(0.157)FS(0.811)PCPAEDLFPGHR;GSALGDLAPS(0.026)RPPS(0.144)FS(0.83)PCPAEDLFPGHR 101.37 6.6914e-15 10969800.0 1440.14 1240.19 1217.55 1396.31 980.6999999999999 1487.0700000000002 1194.25 1580.99 1869.65 1587.24 1603.1599999999999 True False 1586.3419526249656 1344.7051637471843 1300.1802647229272 1482.5568974499074 911.8190152313314 1474.9597949564866 1239.6978372686756 1549.4559141873378 1791.0751123830119 1487.0213955199267 1405.9814832685531 1.1282808283769996 0.9564174064519564 0.9247492091434485 1.054464027508624 0.6485284664713945 1.0490606117568322 0.8817312688832075 1.1020457471354763 1.2738966577420443 1.0576393880116943 1.0 10.457361878949817 -8.359082415666869 5.874042210693486 1.1319656157139402 0.94503661445624 0.24646344687452404 0.13220148856216912 0.23799327254852418 11.8533640385855 0.02379313641426591 0.02881386782830202 4.3743908486586e-09 8.359082415666869 -0.18692900125770018 GSALGTPAAAEPVT(ph)PTSK ddPTM_A549_MK2206_60min_R1 2 GSALGTPAAAEPVTPTSK 18 0 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 GSALGTPAAAEPVT(0.993)PT(0.006)S(0.001)K;GSALGTPAAAEPVT(0.992)PT(0.006)S(0.002)K 137.81 4.712100000000001e-13 5077700.0 3956.2 4383.3 4530.3 3692.0 5771.4 5358.9 5096.7 4247.6 7085.3 5617.6 7581.7 True False 4623.909840196451 4606.391247411955 5172.76466161056 4596.540165740177 4922.43470532735 5925.975241050079 6022.704417246612 4849.710307729439 5480.490862899125 4348.58025840736 5698.954645724978 0.8113610526212974 0.8082870515327578 0.9076690346168775 0.8065584745771284 0.8637434426715208 1.0398354802657357 1.0568086239753622 0.8509824361152633 0.9616659902724912 0.7630487569627195 1.0 12.476481595915372 -7.1280143665613505 5.582349569158246 0.9802431650628902 0.8368889051814693 0.22619955721356289 0.0861048451438627 0.12210809884522676 5.079266784058293 0.008264397169833652 0.014470072571144833 7.447073384084777e-08 7.1280143665613505 -0.14335425988142092 GSALGTPAAAEPVT(ph)PTSK ddPTM_A549_PD325901_60min_R1 1 GSALGTPAAAEPVTPTSK 18 0 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 GSALGTPAAAEPVT(0.998)PT(0.002)SK 133.71 1.1757e-12 5902800.0 2232.0 2212.4 2680.7 2060.6 2398.0 2690.8 2395.3 2680.4 2937.6 2569.0 3032.2 True False 2458.5909968884434 2398.846712418475 2862.628422358633 2187.878582037856 2229.572752650895 2668.887016931896 2486.454452258453 2626.937319266879 2814.1428877791773 2406.7929015717173 2659.2586226994868 0.9245400112278888 0.902073492191346 1.0764761268133822 0.8227400536984554 0.8384189238381012 1.0036207062187263 0.9350179147804678 0.9878457464961428 1.0582434005318608 0.9050616141759523 1.0 11.376808376089365 -8.247370671981969 1.7017047441535826 1.0273909907179293 0.9242931194904114 0.05761670907362959 0.07652394777502672 0.3243726344748869 1.8311132888982118 0.011902695026100474 0.015458019554293666 5.657562078497699e-09 8.247370671981969 -0.1030978712275179 GSASYS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 GSASYSPPR 9 0 A0A087WTY1;P0DPB5 A0A087WTY1 POLR1D 1 GSAS(0.001)YS(0.999)PPR;GSAS(0.001)YS(0.999)PPR 119.22 0.00015539 158942000.0 23110.8 23538.9 20844.7 19945.9 28124.2 21891.3 18785.9 20058.7 30325.0 33373.0 34794.0 True False 27011.338035188342 24736.929467229074 23800.791899404827 24832.64639540548 23987.167435902447 24207.822835731127 22199.054861371693 22902.08215219241 23456.435919074134 25834.016121444867 26153.689534452005 1.0327926390502786 0.9458294377412163 0.9100357281542351 0.9494892245583046 0.9171618942828078 0.9255987689171883 0.8487924746575083 0.8756730908663467 0.8968690971182172 0.9877771198367238 1.0 14.674726863214293 -4.156024562948722 15.844432516394127 0.9372403555770235 0.932997403320381 0.0 0.05254343713400431 0.0 0.0 0.007612924849530578 0.0 6.981929143704044e-05 4.156024562948722 -0.004242952256642507 GSASYS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 GSASYSPPR 9 0 A0A087WTY1;P0DPB5 A0A087WTY1 POLR1D 1 GSAS(0.001)YS(0.999)PPR;GSASYS(1)PPR 118.03 1.1061e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GSAT(ph)PSGQESR ddPTM_A549_PD325901_60min_R1 1 GSATPSGQESR 11 0 Q14781 Q14781 CBX2 Chromobox protein homolog 2 1 GS(0.015)AT(0.825)PS(0.109)GQES(0.051)R 54.7 0.019537 2761800.0 409.25 323.29 286.61 319.69 497.37 404.26 390.22 379.45 359.47 338.0 387.02 True False 450.79675872607316 350.5347828863537 306.0610781259399 339.4365252313318 462.4364470333509 400.9678405919758 405.07003563657736 371.88157207723356 344.3627259905981 316.65862231655893 339.4189935219164 1.328142406081836 1.0327494618055886 0.9017205400032436 1.000051652116558 1.362435384758429 1.1813358952939244 1.193421827792975 1.0956416086750933 1.0145652793834077 0.9329431421347734 1.0 8.40692348857744 -8.681961671349873 3.465854619662935 1.0062705362299165 1.1343524638510782 0.21987230342870356 0.12910439877726487 0.32938350822822354 7.830118169447388 0.023031274439095327 0.0257809108487399 2.0798802387894864e-09 8.681961671349873 0.12808192762116177 GSDALSETSS(ph)VSHIEDLEK ddPTM_A549_MK2206_60min_R1 2 GSDALSETSSVSHIEDLEK 19 0 H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 H3BND4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GSDALSET(0.01)S(0.124)S(0.865)VSHIEDLEK;GSDALS(0.002)ET(0.021)S(0.177)S(0.799)VSHIEDLEK 206.28 7.867399999999999e-56 22193000.0 3524.2000000000003 3696.5 3840.8999999999996 2761.2 5248.6 4263.9 4560.0 4879.5 7778.0 6230.4 7565.900000000001 True False 4118.99880158241 3884.636060971937 4385.597375180452 3437.6941239549787 4476.53789277838 4715.103067852251 5388.492974403942 5571.184067842027 6016.295418913723 4822.948312799272 5687.078221782795 0.7242732807517425 0.6830635889784148 0.7711512316434516 0.6044745631927188 0.7871419590524057 0.8290905952009489 0.9474976014510924 0.9796214946548709 1.057888635304848 0.8480538027991755 1.0 12.473471932349812 -7.636129049851727 1.2766126386168895 1.0263258949449152 0.7007577992852388 0.7391734901599809 0.06977625896930346 0.08180209730141648 0.26918188828916295 0.007463553303995761 0.012818499611880765 2.311377866199187e-08 7.636129049851727 -0.32556809565967637 GSDALSETSS(ph)VSHIEDLEK ddPTM_A549_PD325901_60min_R1 2 GSDALSETSSVSHIEDLEK 19 0 H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 H3BND4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GSDALSETS(0.017)S(0.983)VSHIEDLEK;GSDALSET(0.002)S(0.014)S(0.983)VS(0.001)HIEDLEK 257.22 5.990199999999998e-98 36155000.0 5982.6 7005.8 5777.799999999999 7698.3 8975.8 8260.0 6670.9 7844.5 7780.5 8194.1 10290.400000000001 True False 6589.949147842659 7596.203352857238 6169.916252733878 8173.806506892178 8345.370772828985 8192.733298594272 6924.764749956549 7688.035293608796 7453.51264241758 7676.7231275861495 9024.74603622017 0.7302088193279204 0.8417082677307951 0.683666468615445 0.9057104182308503 0.9247208441473521 0.9078076286815525 0.7673085449900201 0.8518838383654697 0.8258972177724938 0.8506303774949647 1.0 13.139670618607495 -14.999999999926422 0.20349012474368777 1.8280438022690755 0.7989629959894464 0.08109720358610972 0.08362055885875352 31.984427273646368 0.3796011473959103 10.55548055054287 0.05926061323923525 1.0000000001694208e-15 14.999999999926422 -1.029080806279629 GSDALSETSS(ph)VSHIEDLEKVER ddPTM_A549_MK2206_60min_R1 2 GSDALSETSSVSHIEDLEKVER 22 1 H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 H3BND4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GSDALSET(0.001)S(0.126)S(0.871)VS(0.003)HIEDLEKVER;GSDALSETS(0.107)S(0.893)VSHIEDLEKVER 180.36 9.0222e-42 10011500.0 799.02 906.53 689.24 977.16 950.55 837.2 806.5899999999999 900.8900000000001 1338.81 1420.43 1741.5500000000002 True False 933.875041836552 952.6685048973058 786.9845960242069 1216.5642438663797 810.7253541859711 925.7919483116169 953.1369623299287 1028.593916359915 1035.5716726402516 1099.5538764685214 1309.0750706651986 0.7133853991750138 0.7277416904847275 0.6011760621369907 0.9293311522983857 0.6193115829285527 0.7072107391375052 0.7280995442420257 0.78574097040687 0.7910712653889529 0.8399471513194348 1.0 10.354332117599112 -10.258193182605906 0.40389869961813 1.0505578444106471 0.7074297553735472 0.35729374580970497 0.09226628448823825 0.7799264043246551 0.20805687922086213 0.11064725356259497 0.025150507882918033 5.518319191418725e-11 10.258193182605906 -0.3431280890370999 GSDALSETSS(ph)VSHIEDLEKVER ddPTM_A549_PD325901_60min_R1 2 GSDALSETSSVSHIEDLEKVER 22 1 H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 H3BND4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GSDALSETS(0.113)S(0.887)VSHIEDLEKVER;GSDALSETS(0.114)S(0.867)VS(0.018)HIEDLEKVER 171.79 1.5559e-40 19571000.0 1608.26 1595.14 1919.1799999999998 2276.74 2448.5 2825.3 1751.53 2814.0 2678.2 2368.3999999999996 2938.6000000000004 True False 1771.529371261564 1729.568045944316 2049.427095766867 2417.369058948299 2276.525806866438 2802.291693525231 1818.1854326239934 2757.8725624597073 2565.6445676913777 2218.8588198063267 2577.170829320201 0.6873930711565803 0.6711111371691789 0.7952236120519256 0.9379933341810895 0.8833429980529982 1.0873519371102038 0.7054966678726491 1.0701163194475438 0.9955275523462821 0.8609669155659391 1.0 11.331572454938671 -5.567952558236568 0.5240432252693666 0.9957837136529559 0.47297830883436115 0.45476216497631816 0.10653426969669572 1.4803215971803287 0.32780577197217653 0.017384163877137204 0.442383144868054 2.704253757131875e-06 5.567952558236568 -0.5228054048185948 GSDASWKNDQEPPPEALDFS(ph)DDEKEK ddPTM_A549_MK2206_60min_R1 3 GSDASWKNDQEPPPEALDFSDDEKEK 26 2 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 GSDASWKNDQEPPPEALDFS(1)DDEKEK;GSDASWKNDQEPPPEALDFS(1)DDEKEK;GSDASWKNDQEPPPEALDFS(1)DDEKEK 130.61 1.8305999999999998e-24 26454900.0 5292.64 6000.8099999999995 5847.8 5928.34 9880.0 7463.1 6475.2 6910.26 10943.8 9802.3 9928.3 True False 6185.9082393755 6306.225597468147 6677.105972709593 7380.783566133292 8426.665087956857 8252.840288395162 7651.6600236535905 7889.8105167837 8465.046773657492 7587.953622006983 7462.829102859686 0.8288958723448615 0.8450180903984067 0.8947151114784323 0.9890061080596158 1.1291515552363163 1.1058594769686942 1.025302860107241 1.0572144166828634 1.134294602889106 1.0167663653317949 1.0 12.865506933765758 -6.29466335606623 2.228950228986032 1.0683056801688442 0.8414080080212376 0.8208988880841782 0.04318776841525718 0.11488833572024273 1.1012191293334779 0.007828581154140549 0.023669064611612934 5.073838551375755e-07 6.29466335606623 -0.2268976721476066 GSDASWKNDQEPPPEALDFS(ph)DDEKEK ddPTM_A549_PD325901_60min_R1 2 GSDASWKNDQEPPPEALDFSDDEKEK 26 2 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 GSDASWKNDQEPPPEALDFS(1)DDEKEK;GSDASWKNDQEPPPEALDFS(1)DDEKEK 159.75 2.531e-41 64048000.0 8172.0 7493.4 7338.4 8097.6 6053.4 8857.8 6841.9 7682.4 9895.7 9204.7 10630.2 True False 9001.615424091566 8124.895116089587 7836.4279533840345 8597.770361016079 5628.2300670962995 8785.665013594225 7102.272248531335 7529.168505273792 9479.818142223723 8623.513671116074 9322.752790389846 0.965553375326082 0.8715124490338256 0.8405701759529699 0.9222351546078643 0.6037090324756906 0.942389572171294 0.7618213641632282 0.8076121586142527 1.0168475294116759 0.9249964967434761 1.0 13.186540296478357 -8.765463867771484 24.975136996682007 1.007955790188589 0.8362815809868519 0.2834137791392778 0.09728056442101246 67.57154469646615 419333.88985134405 0.015159805256332343 0.0164287704354779 1.716074477341085e-09 8.765463867771484 -0.17167420920173704 GSDASWKNDQEPPPEALDFS(ph)DDEKEKEAK ddPTM_A549_MK2206_60min_R1 3 GSDASWKNDQEPPPEALDFSDDEKEKEAK 29 3 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 GSDASWKNDQEPPPEALDFS(1)DDEKEKEAK;GSDASWKNDQEPPPEALDFS(1)DDEKEKEAK;GSDASWKNDQEPPPEALDFS(1)DDEKEKEAK 139.73 4.8406999999999994e-29 28771300.0 4861.799999999999 5583.4 4585.3 3448.07 8098.9 5284.700000000001 5581.4 3676.45 9390.699999999999 9825.8 11217.3 True False 5682.352980402181 5867.571211370407 5235.564488639363 4292.847304789742 6907.562538547955 5843.923446300053 6595.468133188186 4197.598046155922 7263.721443866427 7606.1449556855305 8431.734828269495 0.6739245358322554 0.695891335635688 0.6209356194511509 0.5091297807892274 0.8192338444264908 0.6930867212174228 0.7822195867777095 0.4978332610843533 0.8614741321694545 0.9020854083532172 1.0 13.041613780674671 -8.960878166407978 4.801442062133215 0.9414141596895094 0.6661283434531808 0.6006060852580626 0.09540316842048521 0.09316241185760982 4.509521956997609 0.01749643296774911 0.018138199159235018 1.0942632993225386e-09 8.960878166407978 -0.27528581623632853 GSDDAPYS(ph)PTAR ddPTM_A549_MK2206_60min_R1 2 GSDDAPYSPTAR 12 0 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 GSDDAPYS(0.99)PT(0.01)AR;GSDDAPYS(0.771)PT(0.229)AR 140.63 1.1797e-11 36479000.0 3691.7 4220.0 3751.8 3902.6000000000004 5266.4 4104.0 3010.7 4552.9 5131.4 6263.4 6980.4 True False 4314.768706600587 4434.779974922648 4283.861655393798 4858.737175194372 4491.719536357896 4538.282555985278 3557.705218867969 5198.287517671477 3969.146093161979 4848.493589879781 5246.9740307607335 0.8223346792465466 0.845207151574118 0.8164442267637261 0.9260074753009454 0.8560590370802089 0.8649332985791992 0.67804894745251 0.9907210302921591 0.7564638341818726 0.924055190945327 1.0 12.357269934222488 -10.995691112700923 1.2349186261500806 1.0012135689785893 0.8336316349315618 0.2416528740295466 0.0798609627033208 0.38019998803277955 1.0193472613616148 0.05435351081305577 0.012034283568733695 1.009970961714613e-11 10.995691112700923 -0.16758193404702748 GSDDAPYS(ph)PTAR ddPTM_A549_PD325901_60min_R1 2 GSDDAPYSPTAR 12 0 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 GSDDAPYS(0.97)PT(0.03)AR;GSDDAPYS(0.985)PT(0.015)AR 166.24 1.0964e-14 54623000.0 4136.6 5145.1 4752.1 4907.799999999999 5811.9 4692.3 4898.4 5078.7 5322.299999999999 4962.7 5097.4 True False 4556.544586796032 5578.695633730017 5074.606082698717 5210.943659577493 5403.692193966533 4654.087464527106 5084.811292507331 4977.401344336928 5098.622239796811 4649.35427506032 4470.452115080916 1.0192581129377687 1.247904124710447 1.135143818134123 1.1656413099691985 1.2087574265111494 1.0410775788933524 1.1374266319404016 1.1133999909194499 1.1405160168468833 1.0400188069067744 1.0 12.12620502909103 -11.50843587032371 0.36348837981890286 0.8995125216039402 1.1477328586485294 0.3190258431061008 0.06296247590042191 3.232476371511791 0.3513323489469686 0.3369481341479172 0.01854430574989262 3.1014453266573775e-12 11.50843587032371 0.24822033704458912 GSDIDNPTLT(ph)VMDISPPS(ph)RSPR ddPTM_A549_PD325901_60min_R1 1 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 2 GSDIDNPT(0.359)LT(0.526)VMDIS(0.115)PPS(0.593)RS(0.407)PR 65.581 0.00052952 4316300.0 741.32 869.74 1056.3 800.63 898.76 941.23 913.33 950.97 801.61 1067.2 790.98 True False 816.5782606690599 943.0360421527956 1127.9868700479062 850.0830967373421 835.6341981536777 933.5649349438114 948.0872729433536 932.0021573284673 767.9211193738647 999.816809870509 693.6944744353403 1.1771439600030627 1.3594400372302469 1.6260571643821657 1.2254430849104 1.2046141766285148 1.34578689804863 1.3667216734212655 1.343534065320481 1.107001926170659 1.44129274012792 1.0 9.43815658273718 -8.871606267639876 2.6835775210728023 1.0425672670620227 1.337300373643495 0.0 0.16612093130144884 0.14439729466786863 2.008370894675582 0.021794639011654005 0.02285054546253866 1.3439828668850098e-09 8.871606267639876 0.2947331065814722 GSDIDNPTLTVMDIS(ph)PPSRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 2 GSDIDNPT(0.009)LT(0.009)VMDIS(0.968)PPS(0.485)RS(0.529)PR 71.92699999999999 0.00010562 3473400.0 875.77 900.86 945.79 1233.4 964.59 1032.9 1011.4 1183.9 1195.6 892.62 1007.0 True False 964.6775256922011 976.7786337684446 1009.9769968972917 1309.5843167453602 896.8405260548493 1024.4884048569031 1049.8893804593163 1160.2861857484165 1145.353089810997 836.2598208645175 883.1453838989452 1.0923201811159389 1.1060224642245466 1.1436135151818438 1.4828637964043423 1.015507234035966 1.1600450203724681 1.1888069615720835 1.3138110744868972 1.2969020850841646 0.9469107081470148 1.0 9.786507144483059 -10.9512691163427 1.239850011971507 1.0010757656945644 1.2091857464860305 0.3246198571379548 0.12317334715030986 0.4825146728642738 1.3296110444777463 0.08378259327105023 0.019963446923734585 1.1187444237956003e-11 10.9512691163427 0.20810998079146614 GSDIDNPTLTVMDISPPS(ph)RSPR ddPTM_A549_MK2206_60min_R1 1 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 GSDIDNPT(0.041)LT(0.041)VMDIS(0.027)PPS(0.497)RS(0.393)PR 66.793 0.00024368 10471000.0 1672.0 1656.0 1710.0 1719.7 2561.9 1481.8 1842.2 1874.5 3179.0 2174.5 2710.5 True False 1954.1927235247128 1740.2833266521093 1952.5037130772944 2141.026577200266 2185.0479037284085 1638.6030924607664 2176.9038941769604 2140.2161154154905 2458.961575819842 1683.2789397441622 2037.4080440056384 0.9591562815677706 0.8541653360858592 0.9583272819707641 1.0508580171259698 1.0724645512994555 0.8042586742904956 1.0684673109943488 1.0504602265178686 1.206906776997606 0.8261864601431327 1.0 10.9925192311465 -7.974661552798375 24.92099141829224 1.0951102629521006 0.9544262769148515 0.0 0.11744644071455947 205.2756766251864 201893.20803467266 0.01583283037129792 0.021875811944281315 1.0600795270261561e-08 7.974661552798375 -0.14068398603724908 GSDIDNPTLTVMDISPPS(ph)RSPR ddPTM_A549_PD325901_60min_R1 2 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 GSDIDNPT(0.001)LT(0.001)VMDIS(0.006)PPS(0.496)RS(0.496)PR;GSDIDNPTLTVMDIS(0.018)PPS(0.546)RS(0.436)PR 85.98200000000001 4.346e-06 16372800.0 4677.56 6056.96 5485.3 5753.849999999999 7071.16 6162.679999999999 5327.64 5931.71 6626.34 6624.98 6560.5 True False 5152.422447762324 6567.401276102969 5857.565443788493 6109.252246558534 6574.506115777694 6112.4931773100425 5530.3862555964715 5813.397390713529 6347.857973518064 6206.677632173838 5753.600090435981 0.8955127862165856 1.1414420837172439 1.018069617581752 1.0618138470752847 1.142676934864882 1.062377134530194 0.9612044926079325 1.0103930233832112 1.103284530336041 1.0787467906382637 1.0 12.49024923330359 -11.203496641003573 1.6467311030923877 1.0000182401025315 1.0555241181562056 0.0 0.07452306939733201 0.8433467281224436 4.1181749171349615 0.04983999427157032 0.010405507327740147 6.258977048303432e-12 11.203496641003573 0.05550587805367413 GSDIDNPTLTVMDISPPSRS(ph)PR ddPTM_A549_MK2206_60min_R1 1 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 GS(0.001)DIDNPT(0.033)LT(0.033)VMDIS(0.026)PPS(0.182)RS(0.725)PR 60.621 0.00041497 10647000.0 1752.3 2088.2 1894.8 1684.4 2688.0 2030.5 1800.3 1974.1 3193.5 2576.6 3253.6 True False 2048.0454003782024 2194.480460576652 2163.5111318940662 2097.07807561559 2292.5987607720676 2245.366162263184 2127.391206539345 2253.9347204276974 2470.1773489715843 1994.5442704735838 2445.6413252081716 0.8374267229083047 0.8973026575717759 0.8846395870048154 0.8574757279410495 0.9374223182857457 0.9181093478914205 0.869870485345296 0.9216129516603764 1.0100325519979199 0.8155506083067227 1.0 11.255997120135516 -8.651364724090495 3.678603167790539 1.0049093997096883 0.8888138542466877 0.0 0.06275582699349606 0.06895846352486011 1.7924184565734576 0.004438597981714761 0.005011123026012449 2.231697237866396e-09 8.651364724090495 -0.1160955454630006 GSDIDNPTLTVMDISPPSRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GSDIDNPTLTVMDISPPSRSPR 22 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 GSDIDNPTLTVMDISPPS(0.205)RS(0.795)PR 208.86 1.5165999999999995e-73 14536000.0 1779.9 2002.8 2363.1 2398.6 2321.3 2222.3 2203.8 2233.7 2010.8 2073.4 2464.7 True False 1960.5941377068748 2171.582984827212 2523.474176474684 2546.75607438416 2158.2598960502596 2204.202325601216 2287.6668149656334 2189.147101196249 1926.2930687453604 1942.485170151342 2161.557525020586 0.907028434363875 1.0046380721727637 1.1674332731212653 1.178204162926409 0.9984744199808908 1.019728737304932 1.0583418615906817 1.012763748295526 0.8911597523767103 0.8986506940789568 1.0 11.077855515509647 -8.553064311863276 6.47152276315502 0.9485625076559462 1.051625328995264 0.3010936255181871 0.07680346232566554 0.18988498931452472 25.20607609907401 0.01407583330560997 0.01607975798668798 2.7985668672661913e-09 8.553064311863276 0.10306282133931777 GSDRT(ph)PER ddPTM_A549_MK2206_60min_R1 1 GSDRTPER 8 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 GS(0.006)DRT(0.994)PER 46.706 0.015475999999999998 83262000.0 790.8 773.31 634.45 409.06 342.93 111.95 0.0 64.05 162.62 1355.5 1604.6 True False 924.2677067962574 812.6681759259325 724.4245501531518 509.2797183634012 292.4854512766239 123.79647469360432 0.0 73.12928364489841 125.78682965077783 1049.2916085643647 1206.133535292916 0.7663062834678533 0.6737796041203445 0.6006172027852799 0.4222415706563701 0.24249839898995285 0.10263911173279806 0.0 0.06063116686921285 0.10428930625847314 0.8699630495801932 1.0 10.236173926593253 -10.852360758217767 1.1266994612302257 0.9958431507682317 0.3102797090597484 0.45754243441596676 0.25209895773418756 0.36694871913229166 0.8348676360197388 0.19347077280543024 0.04838595452505346 1.4048800384701831e-11 10.852360758217767 -0.6855634417084833 GSDRT(ph)PER ddPTM_A549_PD325901_60min_R1 2 GSDRTPER 8 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 GS(0.001)DRT(0.999)PER;GS(0.007)DRT(0.993)PER 46.352 0.016094 179050700.0 4069.5 3944.8 3223.1000000000004 2763.57 3399.3 2747.7 1742.87 2934.6000000000004 3066.0 3696.0 4793.5 True False 4482.632644192439 4277.242140276806 3441.838948074796 2934.2694423771504 3160.54489494837 2725.323642197031 1809.1958715850585 2876.067100850837 2937.1466823022047 3462.633929236695 4203.929888500095 1.066295766838248 1.0174389806017596 0.8187193981255471 0.6979824878630546 0.7518072324645759 0.6482799938343855 0.4303582408769797 0.6841377418587203 0.6986669045877305 0.8236659556832228 1.0 12.037522893458686 -5.758894328929647 3.6219216954025257 0.7801402317131481 1.055266836426941 0.3944049121668317 0.13936185008410631 0.24351489897892434 6.704102323774064 0.0254496896459498 0.10398727188504114 1.742230735536784e-06 5.758894328929647 0.275126604713793 GSDS(ph)DSEGDNPEK ddPTM_A549_MK2206_60min_R1 2 GSDSDSEGDNPEK 13 0 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GS(0.01)DS(0.967)DS(0.023)EGDNPEK;GS(0.002)DS(0.995)DS(0.003)EGDNPEK 114.56 1.9788e-05 87265000.0 3330.3 4031.5 3438.8 3140.7 905.95 672.8 543.37 657.1 1229.3 4044.7 3850.6 True False 3892.3732219822637 4236.686130071246 3926.4735488480687 3910.171640991382 772.6859551047079 743.9952494315049 642.0932955047953 750.245937284352 950.8655127887172 3130.9994608338493 2894.3897488463813 1.344799270220484 1.4637579931175009 1.3565807958009268 1.3509485522984117 0.2669598852098885 0.2570473619622373 0.22184064732841 0.2592069494384362 0.32852020470557025 1.0817477024584452 1.0 11.499043488103323 -6.747193723532724 24.445067386334784 0.5512812349469902 1.3834717718277305 0.6881239230675271 0.2865688604904143 101.87941008635042 174820.16186509855 0.048792087649671516 0.10116513864581664 1.789807305696189e-07 6.747193723532724 0.8321905368807403 GSDS(ph)DSEGDNPEK ddPTM_A549_PD325901_60min_R1 2 GSDSDSEGDNPEK 13 0 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GS(0.018)DS(0.808)DS(0.175)EGDNPEK;GSDS(0.998)DS(0.002)EGDNPEK 385.65 1.5687999999999989e-285 221330000.0 15696.5 16068.1 15088.0 15785.5 20131.2 15679.7 16161.9 15621.0 17399.1 18286.0 17212.5 True False 17289.99712484744 17422.215178001847 16111.96241151454 16760.534483528365 18717.25396086977 15552.009721787965 16776.949948631023 15309.426900562563 16667.876334000095 17131.418839291717 15095.471619027408 1.1453764122913452 1.154135201449529 1.0673374650452043 1.1103021426904074 1.2399250870226015 1.030243381212754 1.1113895857009304 1.01417347446538 1.104164000612655 1.1348713886950081 1.0 13.881828210385963 -14.999999978777524 0.11505101220603031 0.635270650266419 1.1722158176938253 0.003207502616213276 0.06685518819851073 65.31426503910971 0.5277893019548815 5.5948382568327455 0.23308637161644735 1.0000000488665586e-15 14.999999978777524 0.5369451674274063 GSDS(ph)DSEGDNPEKK ddPTM_A549_MK2206_60min_R1 3 GSDSDSEGDNPEKK 14 1 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GS(0.009)DS(0.99)DS(0.001)EGDNPEKK;GS(0.013)DS(0.9)DS(0.088)EGDNPEKK;GS(0.008)DS(0.991)DS(0.001)EGDNPEKK 137.68 2.2148000000000003e-09 67757000.0 7564.6 8690.9 7652.349999999999 7029.01 2165.18 794.07 780.82 1284.26 2001.63 11443.2 12032.0 True False 8841.31954328651 9133.229688164747 8737.568297524578 8751.117765544252 1846.6848901966023 878.0979603389937 922.6848869022111 1466.3077878813008 1548.2640009462943 8858.173172352437 9044.12233369336 0.9775762884529636 1.0098525153888536 0.966104611939322 0.967602763724509 0.2041861909935565 0.09709045587184177 0.10202038991277257 0.16212825675949286 0.1711900772481068 0.9794397781807772 1.0 13.142764791238383 -6.73884998430377 22.65931933889823 0.46421038821719157 0.981384278565194 0.44464649648112653 0.31107819168894607 85.06382113184796 85325.28293153114 0.05650012749186598 0.11750720943706859 1.8245258283210303e-07 6.73884998430377 0.5171738903480023 GSDS(ph)DSEGDNPEKK ddPTM_A549_PD325901_60min_R1 3 GSDSDSEGDNPEKK 14 1 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GS(0.025)DS(0.931)DS(0.044)EGDNPEKK;GSDS(0.964)DS(0.036)EGDNPEKK;GSDS(0.764)DS(0.236)EGDNPEKK 238.67 1.7272e-57 159854700.0 13592.0 12112.6 13719.6 12603.6 14800.1 14471.0 13014.0 14362.5 13731.9 15433.900000000001 13807.5 True False 14971.84983409844 13133.371311173401 14650.694558656878 13382.095747147576 13760.592033573195 14353.15297384476 13509.254891534043 14076.028670336722 13154.795996968574 14459.400920034153 12109.265032954017 1.2363962464570903 1.0845721251812057 1.2098747957689127 1.105112136098243 1.1363688874696585 1.1853033965962634 1.1156131156408013 1.162418084997758 1.0863414056236493 1.1940775002185933 1.0 13.5638236834347 -9.539871241645683 0.5098646489833555 0.9981962077572023 1.1602687700204382 0.0 0.07134739220601465 0.3533870568179688 0.2052501272178782 0.023358235900135648 0.011798732548365038 2.8848866790922746e-10 9.539871241645683 0.16207256226323585 GSDS(ph)DTDASNLETPR ddPTM_A549_MK2206_60min_R1 2 GSDSDTDASNLETPR 15 0 P0CG40 P0CG40 SP9 Transcription factor Sp9 1 GS(0.105)DS(0.541)DT(0.35)DAS(0.004)NLET(0.001)PR;GS(0.029)DS(0.941)DT(0.029)DAS(0.001)NLETPR 59.607 0.0070524 1372800.0 406.73 404.0 563.16 429.55 611.07 505.1 441.59 621.85 1134.6 830.33 784.67 True False 475.376080406224 424.5618743764813 643.0245561734549 534.7897692832322 521.1824124795344 558.5493467417556 521.8211869664549 709.9991418357548 877.6149115838921 642.7578763107699 589.8147832097046 0.8059751873618388 0.7198223687545845 1.0902143765779977 0.9067079776687987 0.8836374185864235 0.9469910938857685 0.8847204271937092 1.2037662704417489 1.4879500083195814 1.0897622348713525 1.0 9.204118172561026 -8.282434525449506 5.875748659187703 1.2356049684347068 0.8942249345421023 0.5096568813422977 0.1416732562658589 0.13099715517670646 16.48938120733416 0.03124368988333762 0.03851787644511111 5.2187377637684935e-09 8.282434525449506 -0.3413800338926045 GSDS(ph)DTDASNLETPR ddPTM_A549_PD325901_60min_R1 1 GSDSDTDASNLETPR 15 0 P0CG40 P0CG40 SP9 Transcription factor Sp9 1 GS(0.025)DS(0.971)DT(0.004)DASNLETPR 74.76899999999999 0.00070946 1946000.0 619.75 795.69 856.37 632.63 962.92 808.1 822.74 916.41 992.56 702.27 1152.5 True False 682.666563764164 862.7455887742976 914.4884179711505 671.7061182930257 895.2878210936609 801.5191015247015 854.0498209206031 898.1314836402629 950.8461549203772 657.928552349852 1010.7498062994388 0.6754060792388826 0.8535698779235835 0.9047623974515308 0.6645622033332649 0.8857660080801719 0.7929945635698179 0.8449665937087376 0.888579426919215 0.940733452526317 0.6509311683755475 1.0 9.981210211792975 -8.549556649524723 0.6617987309437005 0.9891838508273274 0.7906617959112824 0.0 0.12388112197714858 0.3262061826299199 0.30061117625971595 0.01806380880482078 0.020742831191485983 2.8212615527406912e-09 8.549556649524723 -0.19852205491604502 GSDS(ph)EDEVLR ddPTM_A549_PD325901_60min_R1 1 GSDSEDEVLR 10 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 GS(0.042)DS(0.958)EDEVLR 112.94 0.00012085 11513000.0 949.7 878.29 850.06 1152.5 1064.8 1012.5 977.05 1046.4 892.19 897.13 1341.7 True False 1046.1128448678116 952.3065806590231 907.7501834260378 1223.6873074825915 990.0121213605811 1004.2545356933052 1014.2321724122745 1025.5287311150798 854.6943569743006 840.4850586948362 1176.6794057370553 0.8890381184266086 0.8093169439491564 0.7714507273605558 1.0399496256298384 0.8413609658957629 0.853464869697668 0.8619443558434456 0.8715447267241864 0.7263612780228207 0.7142855178708327 1.0 10.20050558655426 -11.115183527043081 1.4810121093433637 0.9995459876718807 0.8369597808347435 0.0 0.1130205458615697 0.37033058929804247 1.4598500170556612 0.05847182948122878 0.012821247346453794 7.670372811611567e-12 11.115183527043081 -0.1625862068371372 GSDS(ph)LIK ddPTM_A549_PD325901_60min_R1 1 GSDSLIK 7 0 Q99623;Q99623-2 Q99623 PHB2 Prohibitin-2 1 GS(0.024)DS(0.976)LIK 92.838 0.012225 20992000.0 4116.3 4814.2 4380.7 4911.2 5163.2 5853.4 4750.0 5650.2 4706.5 5717.8 5527.1 True False 4534.1837457401 5219.909529436371 4678.0006452890875 5214.5536698555325 4800.554644073024 5805.731851088584 4930.763849299734 5537.502328503851 4508.702172294626 5356.7771321941445 4847.30173917365 0.93540365129262 1.076869114058132 0.9650731266600654 1.0757641984021589 0.9903560583565826 1.1977244585723528 1.0172182617499508 1.1423886166921111 0.9301467940106514 1.1051049471303076 1.0 12.242966176132805 -8.788506707497616 24.99971124183256 0.9670137631646011 1.0508466417219988 0.0 0.08433791029334109 235.23226323188837 217262.2188338181 0.012182431379720082 0.012970842016455769 1.6273961809910835e-09 8.788506707497616 0.08383287855739774 GSDSDS(ph)EGDNPEKK ddPTM_A549_MK2206_60min_R1 1 GSDSDSEGDNPEKK 14 1 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GS(0.011)DS(0.246)DS(0.743)EGDNPEKK 140.75 2.8235e-13 63539000.0 7649.1 7236.0 8140.1 6556.5 2192.5 985.13 651.63 732.0 1371.0 10109.0 10455.0 True False 8940.08107745985 7604.2814925450875 9294.488581766365 8162.842794332468 1869.986154387188 1089.3758027236297 770.0227361646571 835.7632416559823 1060.4706890371197 7825.369878994585 7858.734956679198 1.137597988320195 0.9676215745235371 1.1826952598607374 1.0386967927191393 0.2379500218158996 0.1386197408016364 0.09798303930713542 0.1063483176698383 0.13494165344459386 0.9957543958577892 1.0 12.940081381037688 -6.722629619040514 10.019546041117215 0.4522592547981772 1.081760729063501 0.5181396555626767 0.3181911868935782 0.3681147161610411 91.62635333936606 0.057253475437038424 0.11890276975982023 1.893958161379946e-07 6.722629619040514 0.6295014742653238 GSDSDS(ph)EGDNPEKK ddPTM_A549_PD325901_60min_R1 1 GSDSDSEGDNPEKK 14 1 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GSDS(0.403)DS(0.597)EGDNPEKK 169.06 7.218899999999999e-23 160180000.0 9383.0 8346.1 8320.2 9121.4 10258.0 9001.7 8436.3 10180.0 10272.0 9092.0 9475.2 True False 10335.55525260048 9049.455137640494 8884.858805427048 9684.808161797586 9537.513468178848 8928.393139704125 8757.348013020493 9976.95191394449 9840.303561842216 8517.929568349577 8309.8104682416 1.2437774955398637 1.089008608827562 1.0692011375449735 1.165466793594264 1.147741396103952 1.0744400457539462 1.0538565285561314 1.200623281610858 1.184179061538148 1.0250449875966925 1.0 13.020599856766466 -10.90594973322226 1.1597461338932786 1.0000318684818843 1.1360373026411066 0.40432320318159953 0.0578410400073205 0.37830797602569116 0.9042001229528412 0.04101834194595866 0.009774954556593924 1.2417960291346304e-11 10.90594973322226 0.13600543415922228 GSDSS(ph)PTPR ddPTM_A549_MK2206_60min_R1 1 GSDSSPTPR 9 0 A0A3B3IRY9;O15079;O15079-2 A0A3B3IRY9 SNPH Syntaphilin 1 GS(0.074)DS(0.254)S(0.336)PT(0.336)PR 53.756 0.021190999999999998 2288800.0 513.12 549.6 469.27 491.44 714.25 469.29 596.99 564.76 940.77 962.73 964.87 True False 599.7221114204548 577.572292468599 535.819542360106 611.8428220615799 609.1847711612534 518.94995631051 705.4553554362737 644.8164595049623 727.6870971009852 745.2486243549769 725.2661499427122 0.826899354764904 0.7963590917819902 0.7387902253571735 0.8436114412756042 0.8399465095804789 0.7155303695774318 0.9726847937022798 0.8890756304508289 1.0033380120642115 1.0275519192696958 1.0 9.50236670592409 -8.139023876473573 1.290113059145887 1.0012049659815208 0.7958887542947993 0.7201671303793975 0.05518891992895725 0.14358863379511438 0.47024283843674597 0.009114939865106569 0.012514739021943574 7.260660389607887e-09 8.139023876473573 -0.20531621168672143 GSEDS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 GSEDSPPK 8 0 P48651;P48651-2;P48651-3 P48651 PTDSS1 Phosphatidylserine synthase 1 1 GS(0.006)EDS(0.994)PPK;GSEDS(1)PPK 137.28 0.0010875 61866000.0 25706.0 27500.0 22152.0 19013.9 8205.8 3327.2 2437.8 3199.4 4526.4 31041.0 34190.0 True False 30044.544348640116 28899.632538003047 25293.4866971276 23672.306353566408 6998.737690157531 3679.282095583387 2880.7167046056834 3652.924747751569 3501.1776271755043 24028.81654108922 25699.679404003975 1.1690630017726686 1.1245133483455254 0.9841946391435105 0.9211129050068343 0.27232782090920316 0.14316451336782668 0.11209154243989797 0.1421389228373973 0.13623429195891157 0.9349850697882855 1.0 14.649462741881502 -6.618213806956777 4.6982804622268866 0.4594648085326123 1.075776923064976 0.5204562314427333 0.3018657394287446 0.18801801120473452 7.173392316823673 0.0566516095934197 0.12085401202365907 2.4087193032441756e-07 6.618213806956777 0.6163121145323638 GSEDS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 GSEDSPPK 8 0 P48651;P48651-2;P48651-3 P48651 PTDSS1 Phosphatidylserine synthase 1 1 GSEDS(1)PPK;GSEDS(1)PPK 109.02 0.0017048999999999999 169321000.0 17009.9 17730.5 17327.5 18285.5 20313.0 15119.9 13288.6 14777.7 17512.6 18336.5 18506.0 True False 18736.732525973446 19224.71146019515 18503.448348722042 19414.95380561643 18886.284956045718 14996.768547386866 13794.304944800937 14482.947180618625 16776.60632370698 17178.730260673336 16229.879319199483 1.1544591402973914 1.1845258416341313 1.1400853934158952 1.1962475766932597 1.163673776286419 0.9240221847888984 0.8499326873295151 0.8923632083625977 1.0336864491568174 1.0584632160728016 1.0 13.986364652002202 -7.247076494969463 23.491963600686518 0.9864084651844746 1.1687685906221923 0.734966880442321 0.06107436193118557 183.61769809513044 300324.88708535343 0.010219603254268678 0.017637236655833135 5.6613956259794434e-08 7.247076494969463 0.18236012543771773 GSEDS(ph)PPKHAGNNESHSSR ddPTM_A549_MK2206_60min_R1 2 GSEDSPPKHAGNNESHSSR 19 1 P48651;P48651-2 P48651 PTDSS1 Phosphatidylserine synthase 1 1 GS(0.156)EDS(0.844)PPKHAGNNESHSSR;GS(0.069)EDS(0.929)PPKHAGNNES(0.001)HSSR 51.233999999999995 0.0062453000000000005 9602100.0 427.14 663.5 564.74 675.91 330.56 344.53999999999996 325.46000000000004 512.3 781.6800000000001 1056.9099999999999 998.0999999999999 True False 499.2307894296327 697.2693159623641 644.8286239317372 841.507980342753 281.9350618901841 380.99899411285764 384.5918691775233 584.9200938529501 604.6307280864592 818.1532969441259 750.244223841368 0.665424369245381 0.9293897824260957 0.8594916207819816 1.1216453970603069 0.3757910463430593 0.5078332921539643 0.5126222328088748 0.7796395830387971 0.8059118735905157 1.0905159559310604 1.0 9.551216496277405 -9.766513889936641 0.9095093884952141 0.9717119210449511 0.7244879664504356 0.25338065289479805 0.20389553213122782 0.6343661483846078 1.0895769911983755 0.07363153892019064 0.043315331446966886 1.711930423565609e-10 9.766513889936641 -0.24722395459451552 GSEDS(ph)PPKHAGNNESHSSR ddPTM_A549_PD325901_60min_R1 1 GSEDSPPKHAGNNESHSSR 19 1 P48651;P48651-2 P48651 PTDSS1 Phosphatidylserine synthase 1 1 GS(0.012)EDS(0.988)PPKHAGNNESHSSR 101.41 9.9703e-10 12435000.0 421.52 458.24 416.98 326.8 448.59 460.97 653.22 578.38 340.17 605.62 598.6 True False 464.3124000933768 496.85749299341967 445.2787703044366 346.9856937833501 417.08258595148664 457.2160131541163 678.0786445556994 566.8437571696678 325.8738378730403 567.3810498442446 524.9759948380423 0.8844450120745416 0.9464384998150299 0.8481888213608839 0.6609553526164503 0.7944793477274302 0.8709274664933389 1.291637429564546 1.0797517653060345 0.6207404549489429 1.0807752267211463 1.0 9.036107645087013 -3.6105827305736318 17.96453479228371 0.8646496231554094 0.8843853235375997 0.0 0.19233400688010166 0.0 0.0 0.027400155258101938 0.0 0.0002451417428561561 3.6105827305736318 0.019735700382190302 GSEEDEEEKLEDDDKS(ph)EESSQPEAGAVSR ddPTM_A549_MK2206_60min_R1 1 GSEEDEEEKLEDDDKSEESSQPEAGAVSR 29 2 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 GSEEDEEEKLEDDDKS(0.986)EES(0.007)S(0.007)QPEAGAVSR 65.758 0.00012407 5920400.0 902.06 793.93 451.08 447.12 688.61 622.72 573.9 774.46 1117.3 871.33 828.2 True False 1054.3056747504193 834.3376458507908 515.0499268391262 556.6644200719795 587.3163811961512 688.6158170719185 678.1702013180746 884.2420766842785 864.2333339614682 674.4959478350333 622.5350828428222 1.6935682884503562 1.3402259066923052 0.8273428133353347 0.894189637522045 0.9434269607973835 1.106147807650192 1.0893686476610975 1.4203891492289311 1.3882484020256736 1.0834665650567523 1.0 9.282011332043261 -14.999999925325278 0.008245035010950499 0.00031152367802271617 2.2105348351822514 0.02604991615652852 0.24976805990536233 98083.44294150805 62.99321218491354 9526.983336908432 7476.47813489947 1.0000001719449153e-15 14.999999925325278 2.2102233115042287 GSEEDEEEKLEDDDKS(ph)EESSQPEAGAVSR ddPTM_A549_PD325901_60min_R1 2 GSEEDEEEKLEDDDKSEESSQPEAGAVSR 29 2 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 GSEEDEEEKLEDDDKS(0.991)EES(0.007)S(0.001)QPEAGAVSR;GSEEDEEEKLEDDDKS(0.999)EESSQPEAGAVSR 140.61 3.8837e-36 16730600.0 2035.86 1940.54 2506.8 2676.4 2113.44 2147.2 2324.8 2405.5 2716.3999999999996 2245.6 2934.8 True False 2242.5390084790815 2104.0761161257215 2676.9265226129814 2841.7151494545856 1964.9992653721886 2129.7139151018914 2413.271536179375 2357.520415421756 2602.239154535457 2103.812432763506 2573.838205230015 0.8712820424851351 0.8174857735230826 1.0400523689381453 1.104076838893854 0.7634509664901735 0.8274466945025266 0.9376158653934151 0.9159551717863604 1.0110344734364933 0.8173833259948426 1.0 11.329705651410794 -8.747674222054782 8.10702446370484 1.0052437772989105 0.910632462736342 0.0 0.10832770037178827 0.20652772213034756 79.4311043815609 0.016247984372264584 0.018097698123957055 1.7878281781010878e-09 8.747674222054782 -0.09461131456256844 GSEEDPLLS(ph)PVETWK ddPTM_A549_MK2206_60min_R1 2 GSEEDPLLSPVETWK 15 0 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK 171.76 2.9403999999999998e-27 10059100.0 2389.1 2528.0 2289.92 2064.14 4073.3 3132.3 3418.5 3307.3 4249.2 4035.0 3845.0 True False 2792.3216721129706 2656.664402038969 2614.665089268979 2569.854392662767 3474.1229658678812 3463.7579069475355 4039.597200219267 3776.1199031814626 3286.7629845780666 3123.490697570794 2890.180383398517 0.9661409675853949 0.9192036653833487 0.9046719382249894 0.8891674746061755 1.202043646072608 1.1984573443386803 1.3976972591133463 1.3065343342830331 1.1372172489501207 1.0807251739415418 1.0 11.496943822409934 -6.754053909072276 24.98991305886962 1.1285922546659302 0.918673374361475 0.5377679206873242 0.11142827915422951 155.76308831137544 527044.1860336246 0.020291741700012956 0.04158574119995735 1.761757345500407e-07 6.754053909072276 -0.20991888030445516 GSEEDPLLS(ph)PVETWK ddPTM_A549_PD325901_60min_R1 2 GSEEDPLLSPVETWK 15 0 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK 242.41 1.0490999999999998e-64 20310300.0 10879.4 9510.5 9108.5 8914.3 9143.7 9576.8 7566.799999999999 6634.9 10220.2 11371.2 14495.1 True False 11983.868679009027 10311.983212102654 9726.657583860038 9464.916065155809 8501.478056052543 9498.809715977923 7854.7587147118375 6502.561714521641 9790.680535702872 10653.220491378866 12712.294592009532 0.9426991006440044 0.8111818946191175 0.7651378367186242 0.7445482006926663 0.6687603087326384 0.7472144109961483 0.617886775503853 0.5115175444886957 0.7701741384955729 0.8380249855187496 1.0 13.63393684244376 -10.158825080623576 0.9660519453942055 0.9788273688967065 0.7276921222548896 0.26003532688263153 0.11310935675498918 0.34058252424262275 0.6324150939039422 0.04676292998392764 0.021437670097656424 6.937051511255593e-11 10.158825080623576 -0.25113524664181697 GSEEDS(ph)PKK ddPTM_A549_MK2206_60min_R1 2 GSEEDSPKK 9 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 GS(0.019)EEDS(0.981)PKK;GS(0.011)EEDS(0.989)PKK 57.019 0.0060065 75293000.0 12135.2 8742.2 6695.1 4079.0 1773.58 1066.0 1436.24 1512.54 2390.1 13060.8 13006.1 True False 14183.325082845151 9187.140639044737 7644.565853464201 5078.35518311327 1512.6887314472197 1178.8034124464693 1697.1862170083152 1726.9471769594797 1848.7461662054102 10110.356208880456 9776.326419901025 1.4507826839714648 0.9397334176918519 0.7819466663779414 0.5194543394925517 0.1547297692892024 0.120577337725432 0.17360163154469402 0.17664581794691786 0.18910438203475277 1.0341672090959921 1.0 13.255076740492887 -5.49153422809216 1.3433070867060186 0.47509280232252266 1.6119991584125613 0.49336010729502133 0.31723463190270745 0.7282250030196049 1.5288530269298624 0.05613735466304369 0.9972635604304766 3.224525174493375e-06 5.49153422809216 1.1369063560900385 GSEEDS(ph)PKK ddPTM_A549_PD325901_60min_R1 1 GSEEDSPKK 9 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 GSEEDS(1)PKK 103.88 0.00026462 96940000.0 17850.0 16542.0 13818.0 11780.0 12418.0 8199.6 6270.8 8856.7 12672.0 14293.0 20653.0 True False 19662.11885952452 17936.052394154056 14755.77257438414 12507.623845678901 11545.802519774315 8132.825176168716 6509.438725513427 8680.046170553258 12139.439908067045 13390.537540741365 18112.811930153857 1.085536521625966 0.9902411874709782 0.814659404143595 0.6905401488134735 0.6374384366324197 0.4490095302446854 0.3593831123855838 0.4792213491767607 0.6702128832827741 0.7392854070575899 1.0 14.14472291494717 -5.7538793030938535 2.3324661603058416 0.729380061999966 1.0752658717434396 0.3535215496476821 0.18238419048597576 0.39819481019576014 4.119612300020819 0.03457092341343654 0.18493636574391642 1.762465793853746e-06 5.7538793030938535 0.3458858097434736 GSEEDS(ph)PKKESK ddPTM_A549_MK2206_60min_R1 5 GSEEDSPKKESK 12 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 GS(0.001)EEDS(0.996)PKKES(0.003)K;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GS(0.018)EEDS(0.803)PKKES(0.18)K 141.0 2.3558e-12 1055487800.0 86222.7 64269.5 47389.6 29064.5 4574.59 2316.62 2824.38 3474.6699999999996 6538.94 100184.3 104213.1 True False 100774.98381737697 67540.5430327705 54110.15787207468 36185.30380475501 3901.673870922728 2561.7631907520995 3337.533286633114 3967.215113230591 5057.88053054149 77552.59704898196 78334.11113475899 1.2864763812027267 0.8622111370687515 0.6907611140054734 0.4619354618386497 0.049808108043897216 0.03270303516108163 0.042606384859483766 0.05064479644641336 0.06456804650327065 0.9900233234991 1.0 16.257353055501955 -10.958968172622132 1.2628212356513624 0.9950396296527471 0.34745885294389767 0.24766756887351482 0.3965646856467191 0.5437303747842981 1.5605995015886958 0.2967468799279917 0.0711972295322423 1.099086383296932e-11 10.958968172622132 -0.6475807767088494 GSEEDS(ph)PKKESK ddPTM_A549_PD325901_60min_R1 4 GSEEDSPKKESK 12 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 GS(0.001)EEDS(0.994)PKKES(0.005)K;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK 155.98 3.0032e-14 2930120000.0 46190.9 39440.8 32060.4 28271.800000000003 32667.699999999997 23366.199999999997 19189.399999999998 20964.100000000002 27560.4 37790.7 47580.2 True False 50880.166164056674 42764.61463349965 34236.211538846816 30018.084876083587 30373.23344944688 23175.91341423892 19919.663117842592 20545.954579481695 26402.132231872714 35404.58875259877 41728.137035738415 1.2193251311574234 1.0248388179149608 0.8204586634079764 0.7193727544168661 0.7278837639800088 0.5554025427588515 0.4773676596389201 0.4923765123251234 0.6327177321446291 0.8484584088255896 1.0 15.348732892067916 -5.5862736701578255 1.805417728376591 0.7418889292172206 1.246068616964359 0.5385820117846847 0.15328899456826448 0.4203597299911307 2.1223920339310616 0.029389373010048868 0.28912203811335935 2.5925451579898274e-06 5.5862736701578255 0.5041796877471385 GSEGDCS(ph)PEDKNSVTAK ddPTM_A549_MK2206_60min_R1 2 GSEGDCSPEDKNSVTAK 17 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GSEGDCS(0.998)PEDKNS(0.002)VTAK;GSEGDCS(1)PEDKNSVTAK 163.95 3.5821999999999995e-23 38760000.0 10550.0 12404.0 13174.8 10548.7 15579.5 13285.8 10090.7 10210.5 17638.8 17958.5 20889.2 True False 12330.582077264175 13035.310618232346 15043.184747982887 13133.131973549132 13287.776188038857 14691.694537599706 11924.049573863562 11657.869643344822 13643.639963375588 13901.662377280076 15701.835127409176 0.7852956025337362 0.830177524630727 0.9580526496373314 0.836407456006457 0.8462562547764668 0.935667354700078 0.7594048388044083 0.7424526845906569 0.8689200881723184 0.8853527160664989 1.0 13.938645561245567 -10.15841661544575 0.8980942969919791 0.9899583178252717 0.8427015579192223 0.18793551647117712 0.07022502526016 0.36807927820355213 0.5882878208863999 0.02923720957351885 0.012713095650764299 6.943579056563578e-11 10.15841661544575 -0.14725675990604936 GSEGSQS(ph)PGSSVDDAEDDPSR ddPTM_A549_MK2206_60min_R1 2 GSEGSQSPGSSVDDAEDDPSR 21 0 Q8IX07 Q8IX07 ZFPM1 Zinc finger protein ZFPM1 1 GS(0.016)EGS(0.037)QS(0.879)PGS(0.034)S(0.034)VDDAEDDPSR;GS(0.004)EGS(0.146)QS(0.811)PGS(0.019)S(0.019)VDDAEDDPSR 91.475 2.3943e-06 8131600.0 177.44 238.62 0.0 205.1 197.45 168.81 509.36 153.86 404.09000000000003 380.95000000000005 563.1899999999999 True False 207.38753400850769 250.76473877157412 0.0 255.34950920728886 168.40536656043335 186.67336215299096 601.9041187373663 175.6701261764883 312.5642601991316 294.8931304187345 423.3343797467389 0.4898906016860193 0.5923561864302042 0.0 0.6031863260433808 0.3978069691887117 0.4409596080164075 1.4218172384143648 0.4149677762566402 0.7383389470662036 0.696596223994742 1.0 8.725653847049156 -7.571117429643359 24.999957927650527 0.8712654854568535 0.41419977536535446 0.3840203825424614 0.2732100632978378 83.21294234436463 43125.23388693304 0.03940699546908932 0.05845002831079732 2.684618448840694e-08 7.571117429643359 -0.457065710091499 GSEGSQS(ph)PGSSVDDAEDDPSR ddPTM_A549_PD325901_60min_R1 2 GSEGSQSPGSSVDDAEDDPSR 21 0 Q8IX07 Q8IX07 ZFPM1 Zinc finger protein ZFPM1 1 GSEGS(0.024)QS(0.841)PGS(0.132)S(0.003)VDDAEDDPSR;GSEGS(0.015)QS(0.7)PGS(0.142)S(0.142)VDDAEDDPSR 153.11 1.2105e-22 11921800.0 659.03 462.16 649.49 616.85 688.58 646.72 615.8100000000001 792.73 817.8299999999999 680.55 582.84 True False 725.9342404477562 501.1078451506609 693.5682971006485 654.9514235320057 640.216516272041 641.4533267393325 639.2449865341621 776.9183782653453 783.459449180434 637.5799568566104 511.1543749271713 1.4201859087114073 0.9803454097836063 1.3568665967095894 1.2813182389866513 1.2524915126927325 1.2549111544447331 1.250590854524606 1.5199290397857588 1.5327257040342468 1.2473334634912436 1.0 8.997615258446428 GSEGYLAATY(ph)PTVGQTSPR ddPTM_A549_PD325901_60min_R1 1 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAAT(0.009)Y(0.372)PT(0.33)VGQT(0.145)S(0.145)PR 55.33 0.0038256 11052000.0 1663.2 2072.9 1510.5 1768.9 1849.3 1754.6 1850.6 2019.4 1670.9 1887.6 2221.4 True False 1832.046839616874 2247.590557843182 1613.011613374384 1878.1609355366204 1719.411547738658 1740.3111193357763 1921.0255956871763 1979.1214828113464 1600.6778837112706 1768.416613860168 1948.1818826148133 0.9403879873669367 1.1536862024538017 0.8279574036534156 0.9640583111345784 0.8825723938213079 0.893300125037588 0.9860607024580331 1.0158812688243495 0.8216265113619016 0.90772664998128 1.0 10.927912658641441 -5.765284857551712 24.99999815313107 0.9206773472038945 1.0470370835628664 0.28173247610838115 0.07689317085263313 91.11452952220235 592367.9026906167 0.011500496541971906 0.037819891222938044 1.7167819654662835e-06 5.765284857551712 0.1263597363589719 GSEGYLAATYPTVGQTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAATYPTVGQT(0.021)S(0.979)PR;GSEGYLAATYPTVGQT(0.209)S(0.791)PR 321.84 2.319099999999999e-183 133968000.0 8498.1 8127.8 7704.799999999999 7724.6 12034.4 8811.7 9204.9 8405.4 13751.4 13811.900000000001 13094.2 True False 9932.371521402722 8541.470303359309 8797.456496209317 9617.127346770469 10264.155701873275 9744.148245266937 10877.311179844479 9596.891190457916 10636.729856473403 10691.782197218843 9842.548758464722 1.0091259657576754 0.867810819429625 0.8938189397988391 0.9770972522233748 1.0428351389213049 0.9900025373902102 1.1051315514682971 0.9750412648151184 1.0806885612149673 1.086281862512875 1.0 13.264816238952273 -6.539746572785081 3.3580738835859343 1.0357436537939397 0.9186974621081332 0.5067788499468485 0.050488790953770374 0.14190425022256184 3.344746725450718 0.00693982696663273 0.01607503191153646 2.8857149354405695e-07 6.539746572785081 -0.11704619168580654 GSEGYLAATYPTVGQTS(ph)PR ddPTM_A549_PD325901_60min_R1 3 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAATYPTVGQT(0.017)S(0.983)PR;GSEGYLAATYPTVGQT(0.029)S(0.971)PR;GSEGYLAATY(0.007)PT(0.014)VGQT(0.359)S(0.619)PR 307.23 1.8468999999999992e-162 271912100.0 9920.699999999999 9726.7 10498.599999999999 10285.999999999998 11553.0 11409.199999999999 11757.900000000001 12606.3 11558.9 11769.7 11762.4 True False 10927.842160766664 10546.403144856618 11211.098129210408 10921.342858799082 10741.557135686315 11316.28725790821 12205.353318669753 12354.857457048964 11073.119630157516 11026.559133370434 10315.699367996982 1.0593408910954472 1.0223643369809092 1.0867996176770405 1.0587108512178074 1.0412824911329326 1.0969966120780346 1.1831823401654336 1.197675214865042 1.0734240340999395 1.068910477129529 1.0 13.332554013719825 -10.05054130347854 1.135714815878798 1.0101284629485885 1.090546838812487 0.10433899992721407 0.0549541916833723 0.4521919030028171 1.171520448319741 0.01967286905240149 0.010775269011607119 8.901407773470243e-11 10.05054130347854 0.08041837586389855 GSENKTDLDNS(ph)IGIK ddPTM_A549_PD325901_60min_R1 1 GSENKTDLDNSIGIK 15 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 GS(0.019)ENKT(0.017)DLDNS(0.965)IGIK 77.023 0.00016286 5031400.0 2472.7 3285.6 2788.8 3054.2 3846.5 3118.4 2880.7 2858.3 2703.2 3015.8 2830.9 True False 2723.726683694469 3562.489042814201 2978.064738416741 3242.85099740853 3576.3351097046166 3093.0047843022244 2990.3266148795237 2801.288964207027 2589.5939046312214 2825.381873320352 2482.717246553649 1.097074863227125 1.4349153322874053 1.1995182868893757 1.3061700851798772 1.4404923132785494 1.24581435465345 1.204457180547042 1.1283157468276337 1.0430482602180864 1.1380199969377778 1.0 11.277704248865886 -8.32412907099064 1.2719765257690283 1.0159070998438775 1.2990987585959106 0.49050979458050925 0.0987387761844953 0.17608681670906803 0.5531551492580479 0.015892262864635444 0.0202355247902582 4.741010629357657e-09 8.32412907099064 0.2831916587520331 GSENKTDLDNS(ph)IGIKK ddPTM_A549_PD325901_60min_R1 2 GSENKTDLDNSIGIKK 16 2 Q9H501 Q9H501 ESF1 ESF1 homolog 1 GS(0.002)ENKT(0.013)DLDNS(0.985)IGIKK;GS(0.01)ENKT(0.008)DLDNS(0.982)IGIKK 57.989 0.0015856 9264200.0 3611.5 3518.3 3952.4 3979.5 5260.200000000001 3984.3 3884.0 4677.0 4716.2 4330.2 4560.6 True False 3978.136821354217 3814.7994884749232 4220.633631711963 4225.30467689976 4890.741698704855 3951.853181790454 4031.8077454063496 4583.71356596448 4517.994515027286 4056.7904330034426 3999.6751120253534 0.9946149899509638 0.95377733981578 1.05524411695897 1.0564119731115242 1.222784741690753 0.9880435463142697 1.0080338108673843 1.146021473639988 1.1295903763392088 1.014279990093787 1.0 11.965667101335624 -5.843958893062222 5.2292859786460735 1.0702047758234554 0.9745388363704246 0.220503398773659 0.06898053926804093 0.2302199137428871 10.586835207269937 0.010152189602266928 0.03345172731720067 1.4323234654564592e-06 5.843958893062222 -0.09566593945303081 GSES(ph)PEMGPEVTPAPR ddPTM_A549_MK2206_60min_R1 3 GSESPEMGPEVTPAPR 16 0 A0A0A0MSQ2;F8W689;P48382-2;P48382;H0Y4B4 A0A0A0MSQ2 RFX5 DNA-binding protein RFX5 1 GS(0.024)ES(0.976)PEMGPEVTPAPR;GS(0.02)ES(0.979)PEMGPEVTPAPR;GS(0.013)ES(0.986)PEMGPEVT(0.001)PAPR 75.819 0.00017267 11472700.0 2306.8999999999996 2541.77 2104.6800000000003 2313.13 3125.64 2400.59 1636.0700000000002 2454.62 3115.38 3331.74 3903.8 True False 2696.2483217100207 2671.1352362225452 2403.1552718359767 2879.8469538403524 2665.8624965102704 2654.6188404173254 1933.3227413668976 2802.569901958477 2409.7514042395783 2579.0976200060745 2934.3787206010734 0.9188481032733653 0.9102898741289244 0.8189656144124839 0.9814162478831121 0.9084929896043547 0.904661290575866 0.6588524950081696 0.9550811837213716 0.8212134948095482 0.8789245920777998 1.0 11.518839366672994 -10.935806622227792 1.1658762893209906 1.000742827798277 0.8708481575288513 0.006871539486815181 0.09000281231742424 0.5545369933944417 1.3265777478025982 0.058390665336803885 0.013376472809891012 1.1592934384188284e-11 10.935806622227792 -0.1298946702694258 GSES(ph)PEMGPEVTPAPR ddPTM_A549_PD325901_60min_R1 3 GSESPEMGPEVTPAPR 16 0 A0A0A0MSQ2;F8W689;P48382-2;P48382;H0Y4B4 A0A0A0MSQ2 RFX5 DNA-binding protein RFX5 1 GS(0.003)ES(0.997)PEMGPEVTPAPR;GS(0.022)ES(0.974)PEMGPEVT(0.004)PAPR;GS(0.018)ES(0.982)PEMGPEVTPAPR 122.93 6.311600000000001e-08 15956300.0 2433.74 2355.8100000000004 2294.08 2460.44 2865.73 2628.3 2238.6400000000003 2922.91 2619.21 2366.97 3102.21 True False 2680.8114931753057 2554.342376415916 2449.770064223708 2612.41579073533 2664.4510110317974 2606.8959962100894 2323.832670230813 2864.6102670714613 2509.1337122481273 2217.519110250372 2720.6578365294426 0.985354151183904 0.9388693947910466 0.9004329876882688 0.9602147523511485 0.9793407224006734 0.9581859068083065 0.8541436703393646 1.052910891112147 0.922252581180461 0.8150672533960057 1.0 11.409739812149347 -11.012029715174354 1.1920170749249097 1.001102547577998 0.9470192554910931 0.0 0.07315929299665827 0.7784867963983901 1.9005434800801073 0.03575450060806945 0.0074261876434136365 9.726806690181402e-12 11.012029715174354 -0.05408329208690488 GSES(ph)PNSFLDQESR ddPTM_A549_MK2206_60min_R1 3 GSESPNSFLDQESR 14 0 A0A5H1ZRR2;Q6P9H4;G9CGD6-3;G9CGD6;G9CGD6-2;Q5T4Y8 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 GS(0.033)ES(0.576)PNS(0.389)FLDQES(0.003)R;GSES(0.691)PNS(0.309)FLDQESR;GS(0.001)ES(0.992)PNS(0.006)FLDQESR 154.99 6.505199999999999e-19 28774600.0 4156.120000000001 4070.6 3821.0 3945.09 4875.139999999999 3967.34 4158.0599999999995 4172.5599999999995 5966.610000000001 5823.3 6297.620000000001 True False 4857.571448621729 4277.776153061641 4362.875255946395 4911.637227101823 4158.013364058906 4387.161285492848 4913.52567919957 4764.033157929074 4615.182361718284 4507.812485542503 4733.747148530086 1.026157776536521 0.9036765207009352 0.921653632746554 1.0375791255827795 0.878376734876945 0.9267840355298954 1.0379780594587331 1.0063978933493296 0.9749532911049931 0.9522714974208668 1.0 12.208766931735026 -7.740185752336265 24.99913767178713 0.9929246674892764 0.9465440674115757 0.17381627708264435 0.048950052342004356 305.87346027992913 359776.63525101007 0.006897729196060536 0.010225337766819739 1.818922719756821e-08 7.740185752336265 -0.04638060007770073 GSES(ph)PNSFLDQESR ddPTM_A549_PD325901_60min_R1 2 GSESPNSFLDQESR 14 0 A0A5H1ZRR2;Q6P9H4;G9CGD6-3;G9CGD6;G9CGD6-2;Q5T4Y8 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 GS(0.001)ES(0.999)PNSFLDQESR;GS(0.026)ES(0.974)PNSFLDQESR 228.11 3.836099999999999e-47 38251000.0 7288.6 7719.1 8330.6 8095.3 8369.5 7765.4 8405.7 9538.8 7708.900000000001 9286.3 9937.900000000001 True False 8028.533306416269 8369.615647183804 8895.96461196733 8595.328295239757 7781.655193207538 7702.161157010167 8725.583513275535 9348.54115095616 7384.921741421873 8699.961433190125 8715.601301538563 0.9211680328928072 0.9603027212484258 1.0206943048664845 0.9862002629379599 0.892842033955115 0.8837211444780644 1.0011453267986465 1.0726214781424046 0.8473221165036787 0.9982055319182994 1.0 13.089384485997813 -6.710065524411523 24.99887758396855 0.937697435859256 0.9747209667070988 0.0 0.06618655401254601 288.76775998355345 140514.60645073804 0.010853712460541067 0.022593782323543383 1.9495504381058545e-07 6.710065524411523 0.03702353084784282 GSES(ph)PNSFLDQEYR ddPTM_A549_MK2206_60min_R1 2 GSESPNSFLDQEYR 14 0 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2;A0A2R8Y7K8;A0A2R8Y604 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 GSES(0.866)PNS(0.134)FLDQEYR;GS(0.001)ES(0.999)PNSFLDQEYR 241.39 1.5296999999999997e-57 36915000.0 4891.5 5738.4 5586.5 5149.4 7727.1 6266.4 5435.7 5741.0 8730.7 8707.5 8306.0 True False 5717.065614306892 6030.460049311881 6378.7497035709375 6411.0032311653495 6590.453826027477 6929.506288700328 6423.296329159535 6554.804331075128 6753.210390063001 6740.469702378612 6243.390966061919 0.9156987998002931 0.9658949891321085 1.0216803237607266 1.0268463509676944 1.0555888397590565 1.1098946592273369 1.0288153287333042 1.0498788825985754 1.0816574561440055 1.0796167882195322 1.0 12.60811409598554 -5.554985209401108 1.396728383062701 1.0454540795716365 0.8959596318173717 0.6959640838623811 0.029136953657611493 0.40870150109517156 1.0218625428430126 0.005122257244292579 0.07320621789858839 2.7862160560946203e-06 5.554985209401108 -0.1494944477542648 GSES(ph)PNSFLDQEYR ddPTM_A549_PD325901_60min_R1 1 GSESPNSFLDQEYR 14 0 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2;A0A2R8Y7K8;A0A2R8Y604 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 GSES(0.762)PNS(0.238)FLDQEYR 173.46 1.0840000000000002e-22 27699000.0 8470.6 7699.2 8415.2 9118.9 9429.1 9002.5 8804.0 10758.0 10130.0 9428.3 9849.1 True False 9330.529076273855 8348.038604344749 8986.306076708453 9682.153742475486 8766.832544629093 8929.186624769365 9139.041037733661 10543.423250512267 9704.271328023922 8832.995528956257 8637.723138588988 1.0802070090195135 0.9664628595294893 1.0403558822766816 1.1209150359566988 1.0149471572506543 1.0337430919588364 1.0580381995464798 1.2206252829995874 1.123475616470055 1.0226069286123434 1.0 13.076435359833331 -8.001152478253093 24.388645425464002 1.0753119093203685 1.0418481294535318 0.09220226235788509 0.06472523530672573 95.94451280582165 2030422.7428714659 0.011726782954313779 0.016094053734915 9.973498386487208e-09 8.001152478253093 -0.033463779866836685 GSES(ph)PNSFLDQEYRK ddPTM_A549_MK2206_60min_R1 1 GSESPNSFLDQEYRK 15 1 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2;A0A2R8Y7K8;A0A2R8Y604 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 GS(0.009)ES(0.978)PNS(0.013)FLDQEYRK 96.14299999999999 7.461e-06 7937700.0 2046.2 2704.3 2746.1 2132.7 3550.5 2610.0 2268.6 2176.7 3900.3 3019.7 3647.0 True False 2391.5485352130772 2841.937319000785 3135.5382727962296 2655.2115957405426 3028.2261533189085 2886.188467622217 2680.775254765958 2485.253890864176 3016.8882774992544 2337.5476727272667 2741.3492479205197 0.872398340717518 1.0366929062966228 1.1437937997775096 0.9685783734978979 1.104648069054318 1.0528350117415965 0.9779035840834542 0.906580543412844 1.1005121947842829 0.8526996968738803 1.0 11.420670423896858 -5.262461456978976 7.798235967218171 1.0396852187816676 0.8709028234995773 0.1272354691264712 0.0863724689218521 0.08191198567241749 55.989170126066696 0.0091165069646037 0.07370106324601013 5.464350430671932e-06 5.262461456978976 -0.16878239528209038 GSES(ph)PNSFLDQEYRK ddPTM_A549_PD325901_60min_R1 2 GSESPNSFLDQEYRK 15 1 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2;A0A2R8Y7K8;A0A2R8Y604 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 GS(0.001)ES(0.962)PNS(0.037)FLDQEYRK;GS(0.002)ES(0.796)PNS(0.202)FLDQEYRK 148.24 3.651e-14 24743000.0 7818.200000000001 8324.4 7971.6 8398.7 9751.900000000001 9894.0 9067.9 9447.599999999999 10270.0 9895.9 10669.7 True False 8611.897908545356 9025.92640248434 8512.600713124963 8917.468624168363 9066.960186228633 9813.42654434525 9412.983896645279 9259.160206501183 9838.387614887028 9271.071185155142 9357.394540800975 0.9203307470893702 0.9645768769424719 0.9097191185011528 0.9529862810941223 0.9689620488581556 1.048734933806183 1.0059406873998866 0.9895019565679889 1.0514024573815695 0.9907748513467678 1.0 13.191891168495761 -6.995122409338926 2.7785609573799195 1.0219099226147568 0.9365638696164192 0.6827144189251864 0.024401769831785203 0.11202301807653939 1.7527528988588106 0.0037737547295294714 0.007359907537621588 1.0112943727580902e-07 6.995122409338926 -0.08534605299833753 GSES(ph)PVTISR ddPTM_A549_MK2206_60min_R1 1 GSESPVTISR 10 0 P60484-2 P60484-2 PTEN Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 1 GS(0.001)ES(0.794)PVT(0.205)ISR 103.34 0.00037467 3243600.0 642.91 717.3 624.84 504.13 738.73 565.03 817.45 666.22 987.4 991.07 1026.8 True False 751.4174903596125 753.8075061639852 713.4517076486648 627.6418726312556 630.0637955897138 624.8210995634414 965.970083755811 760.6587252131806 763.7554765537942 767.1865986719914 771.8172217616639 0.9735692197234351 0.9766658282688073 0.9243790984868405 0.8132001397930333 0.8163380886365822 0.809545423380544 1.2515529020601477 0.98554256599378 0.989554851873519 0.9940003630923094 1.0 9.592115425248801 GSES(ph)PVTISR ddPTM_A549_PD325901_60min_R1 2 GSESPVTISR 10 0 P60484-2 P60484-2 PTEN Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 1 GS(0.006)ES(0.728)PVT(0.266)ISR;GS(0.03)ES(0.97)PVTISR 134.57 7.4752e-07 7634400.0 1681.42 1679.0700000000002 1421.8899999999999 1433.6399999999999 2008.0900000000001 1988.87 1388.87 1620.23 2184.0 1781.55 1676.8200000000002 True False 1852.1165206040187 1820.5711215966774 1518.3880059191679 1522.1926867673258 1867.0486859344198 1972.673302127747 1441.7242078688253 1587.913241604153 2092.2140750645844 1669.0626289587742 1470.581770237765 1.2594447708300958 1.2379938052015467 1.0325083831779538 1.0350955775286241 1.269598687893808 1.3414237426653286 0.980376771320731 1.079785751286321 1.422711825624163 1.1349675772799213 1.0 10.522171290741309 -6.782636565462514 24.97124149071454 1.1927683259768573 1.1404020028306987 0.004039939684506222 0.1432343882319714 1064.5267663405004 1254058.2974210049 0.02650073391192051 0.050115876967407935 1.6495422152724523e-07 6.782636565462514 -0.05236632314615863 GSESATYVPVAPPT(ph)PAWQPEIKPEPAWHDQDETSSVK ddPTM_A549_PD325901_60min_R1 1 GSESATYVPVAPPTPAWQPEIKPEPAWHDQDETSSVK 37 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 GSESATYVPVAPPT(1)PAWQPEIKPEPAWHDQDETSSVK 83.559 2.7875e-06 2162000.0 446.19 572.01 699.75 372.82 529.98 474.68 375.18 494.45 747.39 856.25 546.31 True False 491.4868803322827 620.2152901692698 747.2392429385808 395.848244664347 492.7560331317437 470.8143634596522 389.4576802063735 484.5878068614789 715.9797974187364 802.1862288714605 479.1173333444218 1.02581736482276 1.2944956214377183 1.5596163839921335 0.8262031388035478 1.0284663042602082 0.9826702786417437 0.8128649353756632 1.0114178159217724 1.4943725630231832 1.6743001620749023 1.0 8.904235197521151 GSESPNS(ph)FLDQESR ddPTM_A549_MK2206_60min_R1 1 GSESPNSFLDQESR 14 0 A0A5H1ZRR2;Q6P9H4;G9CGD6-3;G9CGD6;G9CGD6-2;Q5T4Y8 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 GS(0.009)ES(0.32)PNS(0.671)FLDQESR 62.042 0.0062634 1871600.0 373.13 463.54 759.82 531.31 777.76 727.03 590.56 365.55 731.46 556.7 725.0 True False 436.1052218473538 487.1322060605791 867.5739013277125 661.4809738514122 663.3525342924416 803.9638320365442 697.8571076675418 417.36783194992364 565.785477901598 430.9410833550587 544.9624910179257 0.8002481437442798 0.8938820819588401 1.5919882847481608 1.213810096573516 1.2172443887897262 1.475264527903259 1.2805598902119428 0.765865245459976 1.0382099451372835 0.790772008088321 1.0 9.090013124463042 -8.22422147265505 24.964502727718017 0.9996343106584663 1.2235070053169719 0.25819538618117466 0.2316166421876688 733.4535058214008 491976.49009686103 0.0359754867560825 0.04644356153331933 5.967309003065459e-09 8.22422147265505 0.22387269465850557 GSESPVT(ph)ISR ddPTM_A549_MK2206_60min_R1 1 GSESPVTISR 10 0 P60484-2 P60484-2 PTEN Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 1 GS(0.001)ES(0.323)PVT(0.676)ISR 106.29 0.00031439 3522700.0 721.14 995.75 819.29 578.84 1016.6 1030.4 801.13 866.37 1329.4 1328.4 1336.1 True False 842.850801819743 1046.4294218078733 935.4776415714011 720.6558259851149 867.0594866818768 1139.436244075836 946.6849510053136 989.1806006468491 1028.2930226155695 1028.3135173861322 1004.3094955159318 0.8392341261164273 1.0419391895426655 0.9314635037786131 0.7175634893453846 0.8633389314281579 1.1345469192148652 0.9426227226090146 0.9849360232710828 1.0238806137019714 1.0239010205294028 1.0 9.971988214149356 -7.222343606184084 24.96319621603555 1.011327661474353 0.88175463392163 0.4028777782352406 0.08435843237232826 453.69897142052037 289693.2120376592 0.012248564473793331 0.021214884055445454 5.993167197419412e-08 7.222343606184084 -0.12957302755272293 GSET(ph)PGAT(ph)PGSK ddPTM_A549_MK2206_60min_R1 2 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 GS(0.001)ET(0.999)PGAT(0.999)PGS(0.001)K;GS(0.001)ET(0.999)PGAT(0.993)PGS(0.007)K 152.16 6.468e-12 87208000.0 5401.0 5295.8 4851.799999999999 3807.4 5842.4 4393.3 4838.8 4774.4 6724.5 7461.299999999999 7905.1 True False 6312.556758227854 5565.333599809327 5539.858195969831 4740.213170920681 4982.990699380483 4858.196089963483 5717.947325558289 5451.185820986777 5201.411486819921 5775.7871479021 5942.045500339045 1.0623541603422033 0.9366023197721688 0.9323150076272109 0.7977409749976183 0.8385985430599885 0.8175965817976791 0.9622860217465569 0.9173921372153309 0.8753570612212808 0.9720200135748777 1.0 12.536743937102694 -10.843389164176452 0.942277060463037 1.0038434303108446 0.8989737125330604 0.1577056553099877 0.07089595237217924 0.8077962827324231 1.194073113476283 0.060596873687138994 0.012798322359002627 1.4342036909217503e-11 10.843389164176452 -0.1048697177777842 GSET(ph)PGAT(ph)PGSK ddPTM_A549_PD325901_60min_R1 2 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 GS(0.001)ET(0.999)PGAT(0.993)PGS(0.007)K;GS(0.003)ET(0.997)PGAT(0.997)PGS(0.003)K 175.88 2.118e-15 160107000.0 9371.4 9731.9 9425.900000000001 10425.0 10280.400000000001 11383.5 10943.3 10754.7 11198.0 10529.0 12012.2 True False 10322.777629139955 10552.041367106021 10065.598256541292 11068.92857310717 9558.340169454661 11290.79655018739 11359.753269903533 10540.189071601064 10727.387002093958 9864.197143109614 10534.775551609648 0.9798763702718564 1.0016389352968926 0.9554639495858392 1.0507037875539653 0.9073131290390146 1.0717643195029654 1.0783099473028481 1.0005138714123425 1.0182833938455271 0.9363462083064907 1.0 13.362871956729904 -6.247189081411463 24.88727256210743 1.0127288851908365 0.981257675039498 0.05550995217293053 0.050090510405719955 1453.1320137589776 2537801.253031164 0.005867580061472873 0.015427463667133165 5.65992815677432e-07 6.247189081411463 -0.03147121015133847 GSET(ph)PGATPGSK ddPTM_A549_MK2206_60min_R1 2 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GSET(1)PGATPGSK;GS(0.001)ET(0.999)PGATPGSK 210.64 1.9339999999999999e-31 274490000.0 7248.0 6848.5 6179.9 5123.799999999999 8520.2 6437.4 6611.200000000001 6118.8 9136.8 8794.1 8575.099999999999 True False 8471.285203413341 7197.059397691414 7056.30274645986 6379.131230016123 7266.889866640691 7118.601395199718 7812.369463241084 6986.158638039104 7067.329388471447 6807.5067022322955 6445.666009279749 1.3142606506786625 1.1165734289257143 1.0947360189468371 0.9896775943451247 1.1274071377850847 1.1044012185786778 1.212034482083575 1.0838536511170782 1.096446725333999 1.0561370527780385 1.0 12.654113719842146 -14.999999999999998 0.09773378657123606 0.6024853250066141 1.210381126462972 0.2359427896559284 0.07596110506135433 107.0543586921498 0.7551271668093634 8.739442525988839 0.5644374351230872 1.000000000000004e-15 14.999999999999998 0.6078958014563579 GSET(ph)PGATPGSK ddPTM_A549_PD325901_60min_R1 2 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GSET(1)PGATPGSK;GSET(1)PGATPGSK 226.42 3.4721000000000003e-40 356440000.0 15586.5 16352.5 15322.1 14902.099999999999 19228.6 15770.3 15679.8 16079.5 16308.2 16385.4 17519.1 True False 17168.83000582514 17730.582564103737 16361.949845272211 15822.568871875344 17878.049471068818 15641.871905426295 16276.503369315791 15758.781758376264 15622.823067293164 15350.823047650147 15364.361762724942 1.1174450504984834 1.1540071001920442 1.064928703056673 1.0298227232752386 1.1636050847515362 1.0180619375530855 1.0593673606933527 1.0256710953401407 1.0168221308870289 0.9991188234640738 1.0 13.907300218014587 -6.262937701056556 0.2706870364129219 0.9942012510339525 1.1900822055884805 0.5428518057975729 0.03862783089967706 2.7118539544899303 0.22829859888784854 0.02113935802327799 0.16842905611412512 5.458361549179075e-07 6.262937701056556 0.19588095455452803 GSETDS(ph)AQDQPVK ddPTM_A549_MK2206_60min_R1 1 GSETDSAQDQPVK 13 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GSET(0.027)DS(0.973)AQDQPVK 142.1 2.5331e-12 7480300.0 2345.4 2457.7 2951.1 2533.9 3290.8 2502.0 2349.4 2084.4 3397.9 3276.3 3704.3 True False 2741.246180475395 2582.7864323145486 3369.6103553581274 3154.7056137510945 2806.7276792964 2766.759979306817 2776.2555688738194 2379.8700832072795 2628.281075331313 2536.1815545108275 2784.420076520971 0.9844944746629177 0.927585048712062 1.2101659457822649 1.1329847964940625 1.0080115794895794 0.9936575312888062 0.9970677888311476 0.8547094252318559 0.9439240499282895 0.9108473164292407 1.0 11.44316116703963 -7.172310992362109 2.532987964621695 0.9652469805357083 1.0638399342195597 0.293106652478097 0.07997668003880183 0.33470030045314264 4.194667036069446 0.012399557239392895 0.022813343850892863 6.724949193719003e-08 7.172310992362109 0.09859295368385135 GSETDS(ph)AQDQPVK ddPTM_A549_PD325901_60min_R1 1 GSETDSAQDQPVK 13 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GSET(0.041)DS(0.959)AQDQPVK 160.81 1.3576e-18 11627000.0 4842.1 4940.6 5328.1 5314.2 5648.4 4755.4 6119.1 5751.5 5624.2 5515.3 5994.8 True False 5333.666427434382 5356.961701037206 5689.696906468099 5642.446064576126 5251.675869922148 4716.6735990478455 6351.965698999999 5636.781820535534 5387.834432682342 5167.063016753014 5257.4776041682235 1.0144915164651875 1.0189224005043995 1.082210393432243 1.0732230338180981 0.998896479513013 0.8971362227598233 1.2081774145769153 1.0721456646941476 1.024794557072534 0.9828026680810724 1.0 12.360155084032026 -9.197817327927948 2.50970105758704 1.0088255145374734 1.0455310136870857 0.06659018876032041 0.07140654597961305 0.6676389088278293 8.700249815393825 0.014000706083565864 0.013148933930398728 6.34136384340622e-10 9.197817327927948 0.0367054991496123 GSETPGAT(ph)PGSK ddPTM_A549_MK2206_60min_R1 2 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GSET(0.001)PGAT(0.998)PGS(0.001)K;GSET(0.047)PGAT(0.888)PGS(0.064)K 157.5 8.430399999999999e-14 74360000.0 8535.7 7526.4 7867.9 7601.900000000001 11893.2 8664.099999999999 9068.8 7980.3 12107.8 12064.1 13558.5 True False 9976.317482170987 7909.461612146401 8983.686528725631 9464.365841262259 10143.726034826777 9580.929311235877 10716.483571551411 9111.53196364376 9365.402632183543 9338.81143111866 10191.550254436625 0.9788812529112594 0.7760803228834813 0.8814838081002269 0.9286483022680672 0.9953074636914018 0.9400855681465212 1.051506719194783 0.8940280660125571 0.9189379827771108 0.9163288408506108 1.0 13.315085898597522 -6.369589164389685 3.2314054940851773 0.9628098417192639 0.8678310964090927 0.24459630346551609 0.06080085992960979 0.2265356767545807 4.4554490539368485 0.008268656891789995 0.021066623159926415 4.269832471107662e-07 6.369589164389685 -0.09497874531017114 GSETPGAT(ph)PGSK ddPTM_A549_PD325901_60min_R1 2 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GSETPGAT(0.997)PGS(0.003)K;GSET(0.06)PGAT(0.939)PGS(0.001)K 186.51 2.7028000000000006e-19 85429000.0 13900.3 14475.7 13765.9 14364.599999999999 17562.0 15867.9 15855.599999999999 15866.9 16782.4 16007.5 18029.3 True False 15311.44822313998 15695.618041473574 14700.136755081388 15251.868717626412 16328.505705610944 15738.677083385468 16458.99353451723 15550.422232157742 16077.094090368077 14996.783718142953 15811.810397149222 0.9683551622842976 0.9926515463595112 0.9296934624090698 0.9645871240889807 1.0326778082638075 0.9953747665873265 1.0409303628814504 0.9834688022164365 1.0167775660443465 0.9484545628530169 1.0 13.94871494025393 -6.739789994252404 24.10454627236862 1.0092139460454794 0.963443308092721 0.29753430880836385 0.027406428348556156 89.82997443499873 100016.27723791549 0.002710914689698193 0.00563839850004202 1.8205809988488017e-07 6.739789994252404 -0.045770637952758375 GSFLDKIS(ph)PSVLR ddPTM_A549_MK2206_60min_R1 1 GSFLDKISPSVLR 13 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 GS(0.001)FLDKIS(0.926)PS(0.073)VLR 61.126999999999995 0.0021585999999999997 5136300.0 875.6 1054.3 999.03 973.38 1404.5 962.21 1060.4 1142.4 1714.2 1574.9 1636.9 True False 1023.3798736353101 1107.9593667206034 1140.7074763015253 1211.858143696688 1197.899910529899 1064.0304235366946 1253.0609539600746 1304.3386984532701 1325.9364370149012 1219.1289961844468 1230.4125538582668 0.8317371847566462 0.9004779439597874 0.9270934961810583 0.9849201716095981 0.9735758195684722 0.8647753310059789 1.0184071594773543 1.0600824043636334 1.0776356538764948 0.9908294517652331 1.0 10.264926412918962 -7.884993737114843 6.333528402409887 1.0393869584357243 0.9200211041450229 0.5983420494221421 0.046934035449461 0.11897231335767511 6.2152892694365764 0.007854704689595987 0.010896922992187886 1.3031855713291677e-08 7.884993737114843 -0.11936585429070135 GSFLDKIS(ph)PSVLR ddPTM_A549_PD325901_60min_R1 2 GSFLDKISPSVLR 13 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 GS(0.002)FLDKIS(0.499)PS(0.499)VLR;GS(0.004)FLDKIS(0.808)PS(0.188)VLR 75.376 0.00029965 28942000.0 3264.5 2924.8999999999996 3359.6000000000004 3432.8 4138.8 3849.5 3580.3 3609.1 3501.6 3997.9 4235.2 True False 3595.909636802119 3171.3915879374426 3587.60265891598 3644.836259545545 3848.1049660848753 3818.1509482976576 3716.550275715335 3537.1136692158234 3354.4399291420114 3745.471911714117 3714.2972491448 0.9681265110459485 0.8538335451390276 0.9658900239451781 0.9812990224152771 1.036025042683615 1.027960524477886 1.0006065821929178 0.9522968766245695 0.90311563780049 1.0083931523187852 1.0 11.85887356108431 -5.950079366493214 24.427446516003606 0.9692193863121402 0.9107001177676356 0.22714662409463793 0.045441566335620506 117.07521884230849 57286.19061743952 0.0073025952899529265 0.02270471149019903 1.1218134262914202e-06 5.950079366493214 -0.05851926854450462 GSFLDKISPS(ph)VLR ddPTM_A549_MK2206_60min_R1 1 GSFLDKISPSVLR 13 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 GS(0.002)FLDKIS(0.421)PS(0.577)VLR 52.861999999999995 0.0064637 5873300.0 548.17 1146.2 942.01 719.12 1310.8 979.67 813.71 907.25 1838.4 1349.7 1196.4 True False 640.6876945302281 1204.5366841839675 1075.6011828982118 895.3044322825231 1117.98305640626 1083.3380291476847 961.5505741671556 1035.8554658365983 1422.005335321547 1044.8018325926396 899.3008610397886 0.7124286457253615 1.339414579000024 1.196041535704282 0.995556071465733 1.2431691159659592 1.2046447146676906 1.0692201195664293 1.151845295287411 1.5812342642232073 1.1617934307153004 1.0 9.812660039792735 -8.549558873425473 24.95568095032377 1.2793174110695529 1.1243325548796634 0.07471143221784848 0.20096225520504443 440.20557788813267 411751.2987957738 0.041473329453886904 0.04702688680245315 2.8212471058851997e-09 8.549558873425473 -0.15498485618988944 GSFS(ph)DTGLGDGK ddPTM_A549_PD325901_60min_R1 2 GSFSDTGLGDGK 12 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 GSFS(0.986)DT(0.014)GLGDGK;GSFS(0.862)DT(0.138)GLGDGK 211.96 1.5964e-31 36255000.0 16096.2 18465.6 16117.3 18322.300000000003 19256.0 17511.199999999997 17687.9 18247.6 17688.5 19247.3 19072.300000000003 True False 17730.274374603854 20021.760917028845 17211.11689919827 19454.026858037552 17903.524989593676 17368.594593019847 18361.022713690272 17883.637303034735 16945.113858415705 18032.022193235243 16726.528009270958 1.060009247871199 1.197006390443459 1.0289712778204012 1.1630642562075544 1.0703670827364977 1.0383861243285524 1.0977187078820763 1.0691780920178073 1.0130682140982032 1.0780493228027175 1.0 14.029850390159298 -8.225369751109492 0.5310380996827883 0.99828240217144 1.1143081194748363 0.1598211609982768 0.05269779800694559 0.47767494821625306 0.2951160092418421 0.013046728346688425 0.018930040531801688 5.951552224949655e-09 8.225369751109492 0.11602571730339628 GSFSEQGINEFLR ddPTM_A549_MK2206_60min_R1 2 GSFSEQGINEFLR 13 0 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ; 117.79 4.075e-05 4022200.0 2414.1 3086.6000000000004 2667.1 2262.8 3173.2 2328.8 2776.8 2796.8 3816.9 3012.1 3351.5 False True 2821.541060921655 3243.6947560654603 3045.334884882133 2817.186101580951 2706.4264835126223 2575.23207026767 3281.3086165186087 3193.254964840779 2952.3782443368214 2331.6645180056976 2519.230053305627 1.1200013501027224 1.2875738568652044 1.2088355650116882 1.1182726634609486 1.0743070010463571 1.0222298145771007 1.3025045538072295 1.2675519493151193 1.1719367353778731 0.9255464839132839 1.0 11.298767158067502 -10.468936227797775 0.8843176369256008 1.0038034277165162 1.1749342708399158 0.44056581904809344 0.08870184973558011 0.5110372168028644 0.7420433338726183 0.05290309927020183 0.016836887318698708 3.39675147140358e-11 10.468936227797775 0.17113084312339955 GSFSEQGINEFLR ddPTM_A549_PD325901_60min_R1 1 GSFSEQGINEFLR 13 0 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 107.97 0.00021575 3986900.0 2229.6 2606.2 2418.0 2535.2 3061.1 2670.8 2555.4 3223.2 3194.3 3101.0 3602.5 False True 2455.9473506552295 2825.8336204596962 2582.1000206152025 2691.7935461430507 2846.0988962217084 2649.0498903009197 2652.6471453685353 3158.9107474485145 3060.0546794774723 2905.2023307800278 3159.415338129049 0.7773423522434372 0.8944166303038542 0.8172714709121712 0.8519910357012713 0.900830879015457 0.8384620592079677 0.8396006417248665 0.9998402898553904 0.9685509348984751 0.9195379587225903 1.0 11.625441891538385 -8.260162990491496 24.99105638252877 0.9858359438415526 0.8485660463968868 0.7109066755422473 0.03834199194157948 34.06621887376973 667001.4674518025 0.005025831892917746 0.006307011647312705 5.493346701521065e-09 8.260162990491496 -0.13726989744466578 GSGDTSNFDDYEEEDIRVS(ph)ITEK ddPTM_A549_MK2206_60min_R1 2 GSGDTSNFDDYEEEDIRVSITEK 23 1 A0A087WVC4;A0A0A0MS54;P22694-10;P22694-4;P22694-3;P22694;P22694-5;P22694-7;P22694-6;P22694-9;P22694-2 A0A087WVC4 PRKACB cAMP-dependent protein kinase catalytic subunit beta 1 GSGDTS(0.001)NFDDY(0.004)EEEDIRVS(0.945)IT(0.05)EK;GSGDTSNFDDYEEEDIRVS(0.974)IT(0.026)EK 109.45 4.515e-11 5535400.0 2272.99 2675.02 2618.5 2143.5 3325.4 2535.1099999999997 2535.1 2391.0 3652.7 3323.8 3525.2 True False 2656.615142729926 2811.167092065777 2989.842674089411 2668.657596225371 2836.2380651307417 2803.3736575301755 2995.6948551340834 2729.9315721304006 2825.3692821633012 2572.9512715206442 2649.7955494295074 1.0025736299926562 1.060899620225799 1.1283295704580358 1.0071183026931736 1.0703610947423376 1.0579584746203279 1.1305381110550385 1.0302423417980855 1.066259350753153 0.9709999218900464 1.0 11.371665334450004 -10.644925977140765 0.7340304546280584 0.9962039277094117 1.063807471759942 0.33190357657117486 0.040229691839820655 0.832181910374138 0.7280965819517106 0.03360765876774306 0.007255164882793094 2.2650303353710244e-11 10.644925977140765 0.06760354405053026 GSGDTSNFDDYEEEDIRVS(ph)ITEK ddPTM_A549_PD325901_60min_R1 2 GSGDTSNFDDYEEEDIRVSITEK 23 1 A0A087WVC4;A0A0A0MS54;P22694-10;P22694-4;P22694-3;P22694;P22694-5;P22694-7;P22694-6;P22694-9;P22694-2 A0A087WVC4 PRKACB cAMP-dependent protein kinase catalytic subunit beta 1 GSGDTSNFDDYEEEDIRVS(0.999)IT(0.001)EK;GSGDTSNFDDYEEEDIRVS(0.999)IT(0.001)EK 180.35 3.4152999999999996e-42 31846000.0 10711.099999999999 10973.6 11715.4 11844.9 12643.599999999999 13194.5 11890.8 12614.2 13619.5 13519.9 13003.6 True False 11798.482986904926 11898.383783852552 12510.477494423216 12576.532571280302 11755.557154052074 13087.048366622526 12343.310900895434 12362.599885351543 13047.119778087039 12666.251206679424 11404.239636612048 1.0345698935532013 1.043329863540758 1.0970023336110646 1.1027944845094921 1.0308058694515818 1.1475599236452387 1.0823440487227751 1.084035435879722 1.1440587179701753 1.1106616144767625 1.0 13.477282639521912 -5.645917983761717 6.479880122911218 1.0778684246296812 1.0369499097368122 0.13301039339780674 0.04226701453142205 0.4430343512854121 22.94645897131211 0.007567682978843023 0.02999394808137017 2.2598625035303267e-06 5.645917983761717 -0.04091851489286902 GSGEKPVSAPGDDT(ph)ESLHS(ph)QGEEEFDMPQPPHGHVLHR ddPTM_A549_PD325901_60min_R1 1 GSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHR 38 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 GSGEKPVS(0.003)APGDDT(0.499)ES(0.499)LHS(1)QGEEEFDMPQPPHGHVLHR 119.06 1.2576e-21 21156000.0 1665.6 1996.9 1681.3 1805.8 1942.6 1748.0 1754.2 1701.3 2085.2 2308.7 2649.2 True False 1834.6904858500866 2165.1857711211587 1795.4031284782209 1917.340164730641 1806.1584776061834 1733.7648675475539 1820.9570409350722 1667.3662368559687 1997.56629547833 2162.928287994793 2323.3651946624495 0.7896694372735664 0.9319179679954395 0.7727597592504464 0.8252426993119357 0.7773889708581054 0.7462300251078023 0.7837584229627018 0.7176513794243234 0.8597728415952046 0.9309463243074168 1.0 11.182000224482119 -9.814958545848487 0.8795299463862557 0.9824924181884548 0.7975626521976243 0.5553323301276031 0.05680831399453785 0.23873627068131087 0.3824564949169865 0.020971868694145485 0.011712481846493787 1.5312336135755358e-10 9.814958545848487 -0.18492976599083044 GSGEKPVSAPGDDTES(ph)LHS(ph)QGEEEFDMPQPPHGHVLHR ddPTM_A549_MK2206_60min_R1 1 GSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHR 38 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 GSGEKPVSAPGDDT(0.089)ES(0.955)LHS(0.955)QGEEEFDMPQPPHGHVLHR 70.616 5.2554e-05 6713200.0 750.81 1116.7 899.77 792.35 1410.7 1192.4 1160.6 1505.6 2000.8 1774.9 1672.0 True False 877.5283724578884 1173.5352601886548 1027.3709157400913 986.4757855699431 1203.1878987429902 1318.57897654894 1371.465996950266 1719.0234107066212 1547.6219946210556 1373.9488572784146 1256.7962551475484 0.6982264379478647 0.9337513979550179 0.8174522413893391 0.7849130529547372 0.9573452290417077 1.0491588999794865 1.091239722694157 1.3677820917001438 1.2314024554754615 1.0932152698983912 1.0 10.295535071641629 -7.172492708129338 1.7714399143197048 1.133021858787542 0.817103764632461 0.693644652300766 0.10355569592763397 0.1988546433265947 1.2188065206475265 0.01945534113629342 0.03804553000855845 6.722135955857229e-08 7.172492708129338 -0.315918094155081 GSGEKPVSAPGDDTES(ph)LHS(ph)QGEEEFDMPQPPHGHVLHR ddPTM_A549_PD325901_60min_R1 1 GSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHR 38 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 GSGEKPVSAPGDDT(0.023)ES(0.979)LHS(0.998)QGEEEFDMPQPPHGHVLHR 156.61 6.160399999999999e-52 18217000.0 2145.9 1994.8 1942.0 1858.3 2618.2 2315.0 2227.4 1735.9 2082.6 2360.5 2477.9 True False 2363.7501882719152 2162.9087967512087 2073.7957981946734 1973.0829704944897 2434.3066642996564 2296.1474075358046 2312.1649258800476 1701.2761127127942 1995.0755644365856 2211.4576271545498 2173.1340087022822 1.0877148757537793 0.9952947163358877 0.9542880420122226 0.9079435334375647 1.120182489690701 1.0566064487237865 1.0639771484966036 0.7828675571318012 0.9180637532924043 1.0176351841620448 1.0 11.085561427303247 GSGFPFLES(ph)ENEK ddPTM_A549_MK2206_60min_R1 1 GSGFPFLESENEK 13 0 E9PM59;Q9H5J8 E9PM59 TAF1D TATA box-binding protein-associated factor RNA polymerase I subunit D 1 GSGFPFLES(1)ENEK 47.18899999999999 0.035097 1185000.0 734.13 1002.7 885.6 504.05 837.65 730.76 689.03 943.81 1100.2 870.35 1257.1 True False 858.0331962447344 1053.7331471220232 1011.1913966673985 627.5422726276645 714.4327946282451 808.0885381607707 814.2178320512157 1077.5979577969017 851.0064566583795 673.7373305156729 944.9273758050131 0.9080414201289799 1.1151472315259308 1.070126046254013 0.6641169350110548 0.7560716441510624 0.8551858680910106 0.8616723918677435 1.1404029403623346 0.9006051453778452 0.7130043511986253 1.0 9.884059642291316 -11.233557194226366 0.4448140762306181 1.037676266490268 0.9124211191622572 0.0 0.16239894543618572 8.74926965762041 1.6600268422288624 0.5250889298447623 0.03810582053142081 5.840402870917242e-12 11.233557194226366 -0.12525514732801069 GSGFPFLES(ph)ENEK ddPTM_A549_PD325901_60min_R1 2 GSGFPFLESENEK 13 0 E9PM59;Q9H5J8 E9PM59 TAF1D TATA box-binding protein-associated factor RNA polymerase I subunit D 1 GSGFPFLES(1)ENEK;GSGFPFLES(1)ENEK 79.875 0.00072823 2646400.0 1999.58 2154.18 2674.3999999999996 2632.2 2927.9 2845.2 2877.7 2833.9 2799.0 2976.6000000000004 3260.6000000000004 True False 2202.5758895870044 2335.7203086953677 2855.9008664736552 2794.7850158400674 2722.254404706653 2822.0296345230527 2987.212448237861 2777.375641348456 2681.367763784695 2788.6569680102675 2859.5668706463784 0.7702480792446489 0.8168091233227219 0.9987179862061087 0.9773455709424737 0.9519813761485189 0.986873104277208 1.0446380809981302 0.971257455056701 0.9376831824809178 0.975202572332193 1.0 11.481580927857383 -5.689011373666611 4.72309359871431 0.9767497983133331 0.7828771061590208 0.8744996250206308 0.02768856417261111 0.05594782849582798 2.295089257636222 0.0044655324375933135 0.018363848756642816 2.04639104342513e-06 5.689011373666611 -0.19387269215431224 GSGFTVTGGTEELPEEEGGGGS(ph)GGRR ddPTM_A549_MK2206_60min_R1 2 GSGFTVTGGTEELPEEEGGGGSGGRR 26 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GSGFTVTGGTEELPEEEGGGGS(1)GGRR;GSGFTVTGGTEELPEEEGGGGS(1)GGRR 138.34 8.3214e-25 30190000.0 2429.5 3285.1000000000004 2276.69 2414.8999999999996 3414.8999999999996 2481.9 2451.6 2404.6000000000004 3724.4 3036.6 3754.6 True False 2839.540204427804 3452.297558203411 2599.5588763309597 3006.5506084089807 2912.572733690674 2744.5330106481165 2897.02398597559 2745.459413778655 2880.829346644675 2350.629950989707 2822.2291983115915 1.0061338059029963 1.22325201662174 0.9211012620400054 1.0653105744238136 1.0320114097866788 0.9724699228149305 1.0265020246083292 0.9727981750812923 1.0207637807617258 0.8328983175413179 1.0 11.462619441215361 -5.7688898566103886 24.999998326320718 1.0068903427894942 1.1146929193580335 0.25412101089043415 0.07875092911676297 106.40533485435752 357047.2891717343 0.006836280157170967 0.02187876496157903 1.7025902552662802e-06 5.7688898566103886 0.10780257656853931 GSGFTVTGGTEELPEEEGGGGS(ph)GGRR ddPTM_A549_PD325901_60min_R1 2 GSGFTVTGGTEELPEEEGGGGSGGRR 26 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GSGFTVTGGTEELPEEEGGGGS(1)GGRR;GSGFTVTGGTEELPEEEGGGGS(1)GGRR 158.13 6.237000000000001e-41 36378000.0 5092.0 5256.3 4800.8 6142.1 5873.3 6393.0 4840.2 5491.2 6928.8 6072.2 6824.0 True False 5608.936091467721 5699.266847986455 5126.6111575556115 6521.483567278805 5460.77966978503 6340.937527592393 5024.3964596590695 5381.673708236935 6637.606631551046 5688.800255711863 5984.6912609001065 0.9372139425324555 0.9523075793769982 0.8566208237088845 1.089694235337708 0.9124580419815542 1.0595262564369454 0.8395414634811743 0.8992399897714228 1.109097586189056 0.9505586851035419 1.0 12.547061107794566 -8.757567882695135 24.99999421419177 1.0515183049770631 0.9449985125616218 0.11881778221371686 0.08113646536573363 93.41328322867989 603209.5605721179 0.013095738412961097 0.014576569790611124 1.7475600874982598e-09 8.757567882695135 -0.1065197924154413 GSGGFGS(ph)TGKN ddPTM_A549_PD325901_60min_R1 2 GSGGFGSTGKN 11 1 H0YNW5;A0A0C4DGL3;P33316-2;P33316 H0YNW5;P33316-2;P33316 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 GSGGFGS(0.771)T(0.229)GKN;GSGGFGS(0.772)T(0.228)GKN 113.95 1.902e-05 38051000.0 15527.599999999999 15270.5 15653.400000000001 16333.8 18829.5 17666.1 16829.4 15919.4 17777.9 18338.3 20583.9 True False 17103.95052118505 16557.39862682442 16715.733855540948 17342.70172924872 17506.980878248563 17522.233138776788 17469.85202640105 15601.87507847229 17030.756687312583 17180.416608366137 18052.21079209286 0.9474712387402896 0.9171950636692547 0.9259660242202961 0.9606968325921103 0.9697970558773269 0.9706419529762963 0.9677403076886909 0.8642639540474536 0.9434166753011941 0.9517070682495806 1.0 14.139887909375323 GSGGGGGGGGQGSTNYGK ddPTM_A549_PD325901_60min_R1 2 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 0 ; 108.17 1.0329e-08 3827000.0 1132.34 1218.23 1255.38 1095.83 1541.38 1295.09 1549.27 1521.5500000000002 1021.54 1407.78 1450.47 False True 1247.2943232153496 1320.8945174785567 1340.5776360131983 1163.516930289499 1433.1187862723268 1284.543216425721 1608.2283176430738 1491.2014916171158 978.6082263010417 1318.8925305467615 1272.0713852868948 0.9805222707167828 1.038380811608816 1.0538540930317783 0.9146632364716598 1.1266024869737246 1.0098043484690236 1.2642594875132454 1.1722624287164511 0.7693029161884124 1.0368070108339926 1.0 10.312963917791947 -8.757705853233277 24.9999910419688 0.8910597115680969 1.0696203942404172 0.19807710956979474 0.11133668537475569 85.07522161570824 569669.9426620879 0.020651620345216247 0.022979033089147893 1.7470049952266856e-09 8.757705853233277 0.17856068267232028 GSGGGGGPQVPHQS(ph)PPKR ddPTM_A549_MK2206_60min_R1 2 GSGGGGGPQVPHQSPPKR 18 1 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 GSGGGGGPQVPHQS(1)PPKR;GSGGGGGPQVPHQS(1)PPKR 55.705 0.0021382 29339000.0 2896.9 2925.8 2391.4 1882.42 2552.3999999999996 2369.3 2336.0 2113.1800000000003 2933.4 4330.9 4119.9 True False 3385.8258975949375 3074.710722897791 2730.5364792123055 2343.612984505045 2176.9453411438353 2620.017753385948 2760.420962326229 2412.7297363423327 2268.989583677232 3352.5466820593197 3096.8151265444867 1.0933251612513715 0.9928622140026291 0.8817240834970717 0.7567816898130804 0.7029626413550014 0.846036216669297 0.891374153615164 0.7791003459203987 0.7326848684729316 1.082578889944969 1.0 11.596569544336433 -5.627870600707141 2.457947330478112 0.8447274686135792 1.0856403438133102 0.3349454304702285 0.10796668164389861 0.2781901929516355 3.0670071766722686 0.015713707558463564 0.10077023590327584 2.355751082165457e-06 5.627870600707141 0.24091287519973104 GSGGGGGPQVPHQS(ph)PPKR ddPTM_A549_PD325901_60min_R1 1 GSGGGGGPQVPHQSPPKR 18 1 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 GSGGGGGPQVPHQS(1)PPKR 49.528 0.0079364 9414800.0 1599.5 1318.3 1282.3 1622.1 1716.4 1627.3 1556.1 1568.8 1631.1 1519.6 2090.2 True False 1761.8800625103347 1429.397767574253 1369.3245890963087 1722.293432943611 1595.845985258548 1614.047808329595 1615.3182370305933 1537.5090533002078 1562.5505393030423 1423.652196663441 1833.1186508694902 0.9611380374503498 0.7797628194422969 0.7469917937100289 0.9395428016220814 0.8705633890646421 0.8804928189258318 0.8811858611903877 0.8387395177998609 0.8524001098138895 0.7766285046459868 1.0 10.840084453781058 -10.705058914034499 0.682376893264753 1.0143276085388326 0.8568809535097123 0.0 0.08833013684198708 0.6743315323575938 0.47850218488215013 0.062079842128111684 0.011571068858231592 1.97215518608933e-11 10.705058914034499 -0.15744665502912036 GSGGLFS(ph)PSTAHVPDGALGQR ddPTM_A549_PD325901_60min_R1 1 GSGGLFSPSTAHVPDGALGQR 21 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GS(0.261)GGLFS(0.587)PS(0.105)T(0.048)AHVPDGALGQR 45.558 0.008559700000000002 11601000.0 2980.3 2555.2 3344.1 2771.7 2898.7 3062.2 3206.9 2772.1 2730.6 3091.2 3534.0 True False 3282.857862019098 2770.5356714751815 3571.0507357069073 2942.9016140125805 2695.105311972122 3037.2624584691725 3328.940334383014 2716.808290829621 2615.8423779172867 2896.0211044525063 3099.34040387177 1.059211778712036 0.8939113845043166 1.1521970065778724 0.9495251345532222 0.869573832098382 0.9799705946061787 1.0740802559875071 0.8765762829522434 0.8439997022106749 0.9343991711380678 1.0 11.597745501027891 -6.496579197191253 24.573694776811802 0.9322652461180124 1.0259661798029407 0.19731128790110064 0.08327396652356898 805.5496479095916 752686.3135312678 0.0126139966191934 0.02921278258295096 3.18728429504047e-07 6.496579197191253 0.09370093368492827 GSGGS(ph)SGDELREDDEPVK ddPTM_A549_MK2206_60min_R1 1 GSGGSSGDELREDDEPVK 18 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GS(0.098)GGS(0.487)S(0.416)GDELREDDEPVK 81.665 6.277399999999999e-05 8645100.0 1091.1 917.84 1143.4 1009.7 1283.8 1033.3 1003.3 1141.9 1466.1 1530.5 1944.7 True False 1275.2510051661557 964.5541355883898 1305.5513131769453 1257.0765453271554 1094.9547206395762 1142.6431201509722 1185.586623074445 1303.7678219220838 1134.0306908806135 1184.7589870215863 1461.7773190104278 0.8723975865417423 0.6598502542380116 0.8931259886155286 0.8599644617404191 0.7490571281957106 0.7816807014932354 0.8110582970852536 0.8919059045222354 0.7757889496112258 0.8104921123168245 1.0 10.513507838614634 -10.882681167592295 0.7261953508662096 1.0253461763938663 0.8057596379774604 0.0 0.08677515844602413 0.5687588338870012 0.42699762581144335 0.07906635553543993 0.012171053037128234 1.31014339706326e-11 10.882681167592295 -0.21958653841640585 GSGGS(ph)SGDELREDDEPVK ddPTM_A549_PD325901_60min_R1 1 GSGGSSGDELREDDEPVK 18 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GS(0.095)GGS(0.453)S(0.453)GDELREDDEPVK 74.047 0.00015283 14892000.0 1200.9 1085.3 1333.3 999.68 1132.2 1086.4 1192.8 905.19 1126.3 1127.3 1382.7 True False 1322.814483944145 1176.7620398606814 1423.7857557842215 1061.427963161993 1052.678177877958 1077.5527185947717 1238.1926567252044 887.1352753421819 1078.9655278137552 1056.1220856137786 1212.6366656574698 1.090858062770961 0.9704160142829444 1.1741239532884076 0.8753058465261775 0.8680903420541178 0.8886031151058277 1.0210747306192318 0.7315755002849045 0.8897681872655232 0.8709303582216592 1.0 10.243931634646717 -6.276473331376387 24.95223721939188 0.9228414217539566 1.0676610185764177 0.446400267457849 0.08724735806745118 643.1034446746876 1067374.609672333 0.012629690175818206 0.029462034131262894 5.290864857069444e-07 6.276473331376387 0.14481959682246115 GSGGSS(ph)GDELREDDEPVK ddPTM_A549_PD325901_60min_R1 1 GSGGSSGDELREDDEPVK 18 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GS(0.002)GGS(0.158)S(0.84)GDELREDDEPVK 129.77 4.8755e-13 14976000.0 2519.5 2576.6 2209.3 2472.3 2493.4 2048.7 1700.8 2379.4 2379.2 2400.5 2855.8 True False 2775.2777852421314 2793.739124578488 2359.2363836001527 2625.0083559993154 2318.2721857630277 2032.016066444319 1765.5248747134708 2331.941000396809 2279.2104978908683 2248.9320203281072 2504.5547044077534 1.1080923009419335 1.1154634073920606 0.9419783802079245 1.0480938393477994 0.9256224995537577 0.811328282376178 0.7049256586834907 0.9310800823367275 0.9100262389476649 0.8979368733173297 1.0 11.290338407903288 -5.852106663093546 1.1962994504243707 0.9253105251455559 1.1396501289717995 0.43521642055038845 0.08741594360121664 0.6325430022239065 1.3444849961470713 0.0147858798783004 0.12890317371570717 1.405702240066776e-06 5.852106663093546 0.21433960382624362 GSGHSQEQPAPQPSGGDPS(ph)PPQER ddPTM_A549_MK2206_60min_R1 2 GSGHSQEQPAPQPSGGDPSPPQER 24 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 GSGHSQEQPAPQPS(0.041)GGDPS(0.959)PPQER;GSGHSQEQPAPQPS(0.061)GGDPS(0.939)PPQER 63.085 0.00011295 2912900.0 475.40999999999997 320.51 361.57 309.71000000000004 560.1600000000001 133.44 0.0 299.32 431.28999999999996 539.8 483.90999999999997 True False 555.6475853414375 336.8225899911037 412.84606288734307 385.5889639034102 477.761206039465 147.56053222969686 0.0 341.74952662905537 333.60350362860635 417.8588050926183 363.7417917634271 1.5275879701577526 0.9259936515905456 1.1349976060926559 1.060062309678708 1.3134625079050433 0.40567384768827525 0.0 0.9395388002358683 0.9171437299280081 1.1487786516551504 1.0 8.506770882150805 -7.210277680449909 24.999310166149325 0.8434111026444775 1.167075884413936 0.2831571369267455 0.3380966443761583 516.8086787474336 252529.86215186332 0.05243665311166377 0.09082288623856484 6.1620088759129e-08 7.210277680449909 0.32366478176945845 GSGHSQEQPAPQPSGGDPS(ph)PPQER ddPTM_A549_PD325901_60min_R1 2 GSGHSQEQPAPQPSGGDPSPPQER 24 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 GSGHSQEQPAPQPS(0.088)GGDPS(0.912)PPQER;GSGHSQEQPAPQPS(0.045)GGDPS(0.955)PPQER 63.085 0.00011295 3836200.0 478.48 557.97 544.86 422.77 644.6700000000001 766.58 543.05 630.5699999999999 747.3 190.57 649.52 True False 527.0549373616408 604.9920900958856 581.8374761093461 448.88354271966597 599.3906031907643 760.3372266387893 563.7160649183622 617.9927866774046 715.8935798057529 178.53737767712033 569.6331576465179 0.9252532621858035 1.0620731640613335 1.021424873708636 0.7880221449437073 1.052239665379016 1.3347840034105098 0.9896124503134568 1.0848960921282886 1.25676247984496 0.31342518475357173 1.0 9.153889316029744 -6.995634251151682 24.987265090557262 1.1262226919363127 0.9571299994558985 0.0 0.27005742654794773 130.35047297329137 746045.5950833249 0.018562201759190215 0.034979268342337 1.0101032044108607e-07 6.995634251151682 -0.16909269248041425 GSGIFDES(ph)TPVQTR ddPTM_A549_PD325901_60min_R1 1 GSGIFDESTPVQTR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 GSGIFDES(0.5)T(0.5)PVQTR 234.83 3.025199999999999e-57 82866000.0 4720.7 5776.6 4814.4 4575.4 4397.0 4410.9 5516.9 4999.4 5768.8 5267.9 6607.9 True False 5199.941988804333 6263.414354979462 5141.134135339052 4858.01206651267 4088.1698888265164 4374.979092829235 5726.848648463516 4899.683045046569 5526.357397542389 4935.283894974564 5795.17019092934 0.8972889177514296 1.080799035856276 0.8871411823911588 0.838286349918848 0.7054443189995286 0.7549353942489899 0.988210606381714 0.845476989220369 0.9536143401262487 0.851620182389004 1.0 12.50063531517845 -8.987928883985022 1.2729716826902613 0.9863813140615286 0.8723521663295484 0.0 0.10489912863867826 0.5022387247534232 1.6511212273659794 0.022454864120396226 0.021763842702923933 1.0281846502737034e-09 8.987928883985022 -0.11402914773198025 GSGIFDEST(ph)PVQTR ddPTM_A549_MK2206_60min_R1 2 GSGIFDESTPVQTR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 GSGIFDES(0.002)T(0.998)PVQTR;GSGIFDES(0.018)T(0.982)PVQTR 310.36 6.798299999999999e-136 87937000.0 10425.7 10073.599999999999 10538.5 9646.3 14442.4 11288.6 10443.3 11063.3 15799.7 14724.9 16090.5 True False 12185.303276107406 10586.303212175539 12033.017766236882 12009.643933038862 12317.942091731595 12483.152159233778 12340.712429735222 12631.55665493528 12221.093176936372 11398.534863112802 12094.784774791637 1.0074840935991214 0.8752783459396378 0.9948930874170253 0.9929605327140482 1.0184507059112842 1.0321103179323694 1.0203333634721765 1.0443804408378066 1.0104432120535118 0.9424338733889682 1.0 13.56209747651479 -5.978202937333849 24.978420360760946 1.010617457060328 0.9398072869360165 0.3084949929907087 0.03762893467040886 140.5218992936416 161029.64723602138 0.0038857193096544025 0.01208013079207708 1.0514704274047632e-06 5.978202937333849 -0.07081017012431146 GSGIFDEST(ph)PVQTR ddPTM_A549_PD325901_60min_R1 1 GSGIFDESTPVQTR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 GSGIFDES(0.024)T(0.976)PVQTR 179.46 2.2126e-23 84867000.0 4436.6 5679.3 3893.4 4801.0 4675.6 4311.6 4814.0 4553.4 5820.3 4488.2 6518.0 True False 4887.000365947701 6157.914542505086 4157.629536916141 5097.546866137894 4347.201985944342 4276.487759106427 4997.1994043218765 4462.578864926802 5575.693031638459 4204.814286038995 5716.327321006285 0.8549196173544883 1.0772501637329377 0.7273253093184041 0.89175209533672 0.7604886392648126 0.7481180693399493 0.8741975614234393 0.7806723818154667 0.9753977892674155 0.7355796912796085 1.0 12.48087281321484 -8.834621763641408 7.283900446192647 0.9889330973268206 0.8409086397491035 0.0 0.11900474330819992 0.18004865390758765 15.102617613061009 0.015518051950860577 0.016497118337194007 1.4634511705445934e-09 8.834621763641408 -0.1480244575777171 GSGS(ph)PEDTPR ddPTM_A549_MK2206_60min_R1 1 GSGSPEDTPR 10 0 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 GS(0.018)GS(0.952)PEDT(0.03)PR 83.86200000000001 0.00094601 10683000.0 228.61 269.4 293.18 289.85 276.86 133.92 204.2 194.81 346.7 344.5 325.83 True False 267.1937790221201 283.1113092995643 334.7573325146203 360.8632630118612 236.13426075422421 148.09132551109857 241.30049679238687 222.42491408060368 268.1730035661338 266.677210734359 244.91741854947702 1.0909545780964653 1.1559459959046219 1.3668171684040278 1.4734079149987502 0.964138288541211 0.6046582002544743 0.9852320762708044 0.9081629040429825 1.0949527606259608 1.0888454251794515 1.0 7.936151571930258 -6.787169119539978 24.999362276725723 0.9921879845786226 1.270295772245148 0.4789233049434577 0.1577826945842427 175.62771910358205 170641.8480480799 0.024455856960522993 0.04622845928907087 1.6324161414575518e-07 6.787169119539978 0.27810778766652544 GSGS(ph)PEDTPR ddPTM_A549_PD325901_60min_R1 1 GSGSPEDTPR 10 0 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 GS(0.096)GS(0.809)PEDT(0.095)PR 66.595 0.0049956 20024000.0 278.58 198.95 172.44 111.21 284.05 201.33 130.1 148.84 310.46 239.22 245.82 True False 306.8612365202433 215.7162147150857 184.14281536595757 118.07918912376483 264.0993079193023 199.6904352307488 135.05102669345172 145.87126943727884 297.4124458537322 224.11560837445933 215.58569838136927 1.4233840130591984 1.000605403487784 0.8541513502449987 0.5477134615622032 1.2250316690864755 0.9262693988053795 0.6264377818539132 0.6766277658141951 1.3795555460623001 1.0395662145361828 1.0 7.7521176649030075 -8.764408612090865 24.99993381884365 1.1792345518305565 0.9006957261923241 0.1301929623611371 0.25813677880510527 99.08523328311692 834262.4840273017 0.04705984817187016 0.0511651860338825 1.7202492925247987e-09 8.764408612090865 -0.2785388256382324 GSGS(ph)PTHSLSQK ddPTM_A549_MK2206_60min_R1 3 GSGSPTHSLSQK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L2R2 I3L419 FAM64A Protein FAM64A 1 GSGS(0.997)PT(0.003)HSLSQK;GS(0.372)GS(0.536)PT(0.092)HSLSQK;GSGS(0.987)PT(0.013)HSLSQK 187.11 2.3531e-19 35928200.0 7911.6 8769.2 7987.799999999999 7690.8 10338.0 6682.1 6811.4 7842.799999999999 13780.1 13332.7 14733.699999999999 True False 9246.884659951023 9215.514823718417 9120.590151648421 9575.046345253128 8817.293894665789 7389.195386781005 8048.9432118103 8954.540917567669 10658.929352297886 10320.833810037697 11074.915660566645 0.8349395104538349 0.8321069980271892 0.823535856270509 0.8645705880493562 0.7961499811741821 0.6672010526536993 0.7267724160166181 0.8085425832587796 0.9624388734850667 0.9319108268053062 1.0 13.435008091734208 -8.772723005563433 3.9566949816392327 0.9838335722137136 0.7911648195390288 0.6595070746630578 0.05439501055517402 0.08774463079038126 2.9850941246080795 0.010277608770180333 0.011170425588396482 1.6876290575192314e-09 8.772723005563433 -0.19266875267468475 GSGS(ph)PTHSLSQK ddPTM_A549_PD325901_60min_R1 4 GSGSPTHSLSQK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L2R2 I3L419 FAM64A Protein FAM64A 1 GS(0.029)GS(0.719)PT(0.252)HSLSQK;GS(0.001)GS(0.998)PT(0.001)HSLSQK;GS(0.028)GS(0.967)PT(0.005)HSLSQK;GS(0.007)GS(0.991)PT(0.002)HSLSQK 225.33 3.7075999999999995e-40 71289000.0 19928.4 20232.2 19528.0 22222.3 30041.2 24426.199999999997 24006.0 27271.800000000003 24810.399999999998 25353.8 27707.899999999998 True False 21951.516497487304 21937.23849891208 20853.287511403494 23594.92100049491 27931.209748513797 24227.281125680787 24919.56146658724 26727.842554686784 23767.70516849009 23752.956741093418 24300.003954849646 0.9033544413521116 0.9027668694899114 0.8581598402267635 0.970984245283877 1.1494323128675645 0.9970072914677718 1.0254961897491357 1.0999110372306176 0.9780947037149217 0.977487772645113 1.0 14.568668928180568 -6.451907292474665 5.945407684460706 1.0121494960303534 0.8919156660502356 0.5700745004716838 0.05304739557276188 0.1480284738106908 9.517410283930339 0.0077651366594081615 0.01813427656575245 3.532585707791234e-07 6.451907292474665 -0.12023382998011778 GSGS(ph)QSSVPSVDQFTGVGIR ddPTM_A549_MK2206_60min_R1 2 GSGSQSSVPSVDQFTGVGIR 20 0 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 GS(0.014)GS(0.986)QSSVPSVDQFTGVGIR;GS(0.096)GS(0.903)QS(0.001)SVPSVDQFTGVGIR 134.37 5.604999999999999e-17 5903400.0 2967.1000000000004 3441.9 3790.0 3376.0 4026.6 2584.85 2561.5 3051.5 4767.6 4842.5 5693.1 True False 3467.8739413697194 3617.07800845646 4327.47898980289 4203.120151554401 3434.292474004765 2858.3771113154376 3026.891393406951 3484.059469826815 3687.746212292757 3748.575886737688 4279.346148433317 0.8103747210632447 0.84524081086095 1.011247709276146 0.9821874664411472 0.8025273849983067 0.6679471611245796 0.7073256727584671 0.8141569644003539 0.8617545962349537 0.8759693085613218 1.0 12.063174665289855 -10.13420334943858 0.8962438805465116 0.9885346354922652 0.8345247595878075 0.10328016821391306 0.10108362575699686 0.5755854150314048 0.9193467141094119 0.04736794367555397 0.020990589308854397 7.341700276840489e-11 10.13420334943858 -0.1540098759044577 GSGSPT(ph)HSLSQK ddPTM_A549_MK2206_60min_R1 1 GSGSPTHSLSQK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L2R2 I3L419 FAM64A Protein FAM64A 1 GS(0.017)GS(0.079)PT(0.904)HS(0.001)LSQK 84.46799999999999 0.00042565 15469000.0 2256.3 2493.1 2425.1 2242.0 2555.2 2352.2 2226.2 2051.3 3718.8 3681.0 3988.2 True False 2637.108278761249 2619.9881411089223 2769.015645955406 2791.290100647203 2179.3334648529735 2601.1082427360066 2630.6717236004492 2342.078056842781 2876.4977377033124 2849.4595434344715 2997.819871279574 0.8796753614271159 0.8739644987377511 0.9236764598446316 0.9311066776856687 0.7269727863678341 0.8676666225531967 0.8775282827375439 0.78126043505179 0.959529878783385 0.9505105929590836 1.0 11.54969798395223 -8.914433249760664 7.029641555328443 0.982330096774275 0.8596286407488601 0.43791640424728784 0.056652521546999575 0.13456630156845115 9.258697967734046 0.00985043082368709 0.010437609580135202 1.2177741480423362e-09 8.914433249760664 -0.12270145602541482 GSGSPT(ph)HSLSQK ddPTM_A549_PD325901_60min_R1 1 GSGSPTHSLSQK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L2R2 I3L419 FAM64A Protein FAM64A 1 GS(0.015)GS(0.077)PT(0.908)HS(0.001)LSQK 98.59200000000001 0.00022321 11900000.0 2600.1 2960.7 2599.0 2954.9 3541.2 2984.4 2832.2 3450.7 2940.0 3821.6 3571.2 True False 2864.060237907546 3210.2085795775515 2775.3837690566206 3137.417461935193 3292.478328476794 2960.096035874667 2939.9809208393053 3381.873081478216 2816.4420241254024 3580.303523801666 3131.965039702001 0.9144611135825623 1.024982251999529 0.886147748737544 1.0017408949857598 1.0512500256995416 0.9451242265961926 0.9387017043839792 1.0797927303173196 0.8992571719106355 1.143149262018047 1.0 11.6128523934181 -4.90967275435702 13.748954790215658 0.9668496200724986 7.088703359109903e-05 0.0 0.07920211165906081 470827.3145160678 1317102.615330696 0.008211106818587366 13379004.371419955 1.2311961411373985e-05 4.90967275435702 -0.9667787330389075 GSGSRPGIEGDT(ph)PR ddPTM_A549_MK2206_60min_R1 4 GSGSRPGIEGDTPR 14 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GS(0.001)GS(0.001)RPGIEGDT(0.999)PR;GSGSRPGIEGDT(1)PR;GS(0.001)GS(0.001)RPGIEGDT(0.998)PR;GSGSRPGIEGDT(1)PR 92.264 2.455e-05 40531700.0 5217.820000000001 5571.599999999999 4923.71 5411.29 6896.700000000001 4898.68 5155.1 5309.62 7908.599999999999 8436.9 8280.800000000001 True False 6098.460452548871 5855.170641772282 5621.966115272396 6737.056292922038 5882.204566003249 5417.055066119389 6091.71494130477 6062.274895029286 6117.31472743907 6530.998430318473 6224.448821546536 0.9797591123953748 0.9406729510738425 0.9032070592036057 1.082353873583322 0.9450161347043974 0.8702867067310001 0.9786754001764308 0.9739456566891723 0.9827881797763988 1.0492492777369757 1.0 12.603730376039216 -8.64996050051172 1.5634767131847442 0.9931407469262316 0.9559306669927579 0.14498077999462677 0.05284274538049391 0.6763106717051957 3.2275871028211793 0.009515186242994692 0.01064179797017245 2.238924761604099e-09 8.64996050051172 -0.037210079933473694 GSGSRPGIEGDT(ph)PR ddPTM_A549_PD325901_60min_R1 4 GSGSRPGIEGDTPR 14 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GSGSRPGIEGDT(1)PR;GS(0.001)GS(0.001)RPGIEGDT(0.997)PR;GS(0.002)GS(0.002)RPGIEGDT(0.996)PR;GSGSRPGIEGDT(1)PR 78.078 0.00026776 52199000.0 6390.610000000001 6095.650000000001 5975.9 5972.92 7028.500000000001 6087.4 6200.5 6632.499999999999 6569.4 7373.499999999999 7458.599999999999 True False 7039.380022681567 6609.351818185536 6381.460510005949 6341.8537029144645 6534.842407008681 6037.826232671038 6436.463420543793 6500.209584404404 6293.310963703886 6907.935951630618 6541.239483960948 1.0761538451454125 1.010412756541264 0.9755735936061085 0.9695186544483847 0.999022039023651 0.9230400824607823 0.9839822309404717 0.9937275038382024 0.9620976237202475 1.056059171747007 1.0 12.675348319151864 -5.321104912190882 2.237984028721172 0.9786724921018339 1.0939841137814115 0.4103364924989177 0.03106417659352843 0.2557279620768891 1.6119200071075583 0.0030176590251015144 0.05503250714294573 4.774139312028852e-06 5.321104912190882 0.11531162167957754 GSGSRPGIEGDT(ph)PRR ddPTM_A549_MK2206_60min_R1 1 GSGSRPGIEGDTPRR 15 2 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GSGSRPGIEGDT(1)PRR 47.754 0.0097759 11707000.0 798.64 899.08 788.55 792.03 950.05 729.84 858.57 756.62 1297.9 1730.2 1359.1 True False 933.4309071266599 944.839331718828 900.3782473374855 986.0773855555774 810.2989035236246 807.0711843714171 1014.5610554899102 863.8732020515695 1003.9277223204062 1339.346618323912 1021.5979607482251 0.9136969169779949 0.9248641520650858 0.8813430350605267 0.9652303777440666 0.7931680902437945 0.7900086094340996 0.993111864423495 0.8456097557388065 0.982703334279488 1.311031021775891 1.0 9.996611834998056 -8.837882984377599 7.232000508856817 0.9922410149692761 0.8890567570577457 0.30619511945677913 0.11330381165802851 0.16936951516930243 13.495904954676508 0.010226219113066528 0.010869533135349996 1.4525029249732153e-09 8.837882984377599 -0.10318425791153041 GSGSRPPT(ph)PK ddPTM_A549_MK2206_60min_R1 2 GSGSRPPTPK 10 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79;M0QXV1 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GSGS(0.001)RPPT(0.999)PK;GS(0.013)GS(0.011)RPPT(0.976)PK 69.345 0.0014454000000000001 56705000.0 10896.099999999999 10896.3 11653.1 10537.099999999999 14178.0 11970.8 10649.3 11290.8 14615.400000000001 16211.7 15024.8 True False 12735.095295931591 11450.875128139733 13305.684806351475 13118.689973028388 12092.434981483037 13237.542110426066 12584.139963228045 12891.305476624819 11305.035235997897 12549.46571048537 11293.727496615362 1.1276255159997615 1.0139145938815566 1.178148207519535 1.1615908013505685 1.0707213349274667 1.1721145312203831 1.1142592175169277 1.1414571035548926 1.001001240678591 1.1111889953291634 1.0 13.463234105991509 -8.767325900718808 24.9625153857571 1.0004727968610847 1.1216747561022014 0.2544639507113935 0.05582077000237064 63.84765971335877 270753.0768081619 0.00738420617387356 0.007961700542708382 1.7087325767761672e-09 8.767325900718808 0.12120195924111665 GSGSRPPT(ph)PK ddPTM_A549_PD325901_60min_R1 2 GSGSRPPTPK 10 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79;M0QXV1 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GS(0.003)GS(0.003)RPPT(0.994)PK;GS(0.001)GS(0.001)RPPT(0.998)PK 51.726000000000006 0.0097413 83108000.0 7874.3 7664.3 8174.700000000001 7755.9 8586.4 8180.0 7948.8 8457.7 8422.400000000001 8723.099999999999 9667.8 True False 8673.693139246721 8310.197458863191 8729.484300464477 8234.964328073089 7983.320885471917 8113.384792070356 8251.295933750256 8289.004538562704 8068.435817684964 8172.32197730644 8478.721889233593 1.02299535856468 0.9801238402943259 1.0295754966971267 0.9712506714638168 0.9415712638964201 0.9569113007908482 0.9731768586758193 0.9776242984320791 0.9516099151607252 0.9638624882464627 1.0 13.049631089186759 -6.28625096129419 23.44179999561037 0.9721404497237288 1.0078207906251522 0.5018611360205392 0.018914109382222922 293.7006421751955 277485.72305886645 0.0032091086793120606 0.007461168918481738 5.173078142073415e-07 6.28625096129419 0.03568034090142336 GSGTAEVELKK ddPTM_A549_MK2206_60min_R1 2 GSGTAEVELKK 11 1 P14618;P14618-2;H3BTN5;P14618-3;H3BQ34;H3BT25;H3BUW1;H3BTJ2 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 82.85 0.00066652 52716000.0 17445.9 20294.9 18290.7 18823.8 25852.0 19429.2 17880.9 18248.3 27695.0 26080.0 26222.0 False True 20390.341408696037 21327.82372347339 20884.59629519465 23435.631845032505 22049.205045937317 21485.185047940846 21129.628075881436 20835.05240807493 21422.126719827134 20188.50988665337 19710.353709616633 1.0344990104742584 1.0820619476284485 1.0595749118903486 1.1890010798536974 1.1186610535142028 1.0900456361398667 1.0720065396681513 1.0570613148311774 1.0868463872048797 1.0242591373082994 1.0 14.266666045861395 -10.786683405648033 0.4530117159991579 0.9750611535278333 1.0944887697797243 0.3636574775297182 0.03857070857138086 1.4855050859143994 0.3807662203617285 0.08165625681650027 0.010528435937841606 1.6342428530030464e-11 10.786683405648033 0.11942761625189102 GSGTAEVELKK ddPTM_A549_PD325901_60min_R1 2 GSGTAEVELKK 11 1 P14618;P14618-2;H3BTN5;P14618-3;H3BQ34;H3BT25;H3BUW1;H3BTJ2 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 104.59 0.00019288 100913000.0 28168.0 24913.0 28134.0 28273.0 32333.0 32341.0 30890.0 30649.0 31850.0 31446.0 31166.0 False True 31027.5946238144 27012.505942181095 30043.342423485585 30019.3589973582 30062.04162279458 32077.625618624385 32065.535853656602 30037.681651324634 30511.45526135853 29460.49419339207 27332.779577551682 1.1351788988668117 0.9882824344863328 1.0991689424869207 1.0982914822908458 1.0998530733948635 1.1735954452641775 1.1731531278286793 1.0989618368705714 1.1162953688916981 1.0778447947382517 1.0 14.738344560187816 -10.629063948379653 0.8695179835562634 0.9989489069208258 1.1082723838726467 0.16217698894408183 0.05170966234309709 0.4991635012683489 0.6627645980609713 0.03485358046073309 0.009062053655744366 2.3492868709083664e-11 10.629063948379653 0.10932347695182087 GSGTAS(ph)DDEFENLR ddPTM_A549_MK2206_60min_R1 4 GSGTASDDEFENLR 14 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GS(0.112)GT(0.09)AS(0.799)DDEFENLR;GSGT(0.05)AS(0.95)DDEFENLR;GSGT(0.002)AS(0.998)DDEFENLR;GSGT(0.065)AS(0.935)DDEFENLR 302.53 1.6555999999999992e-135 1391963100.0 21548.25 26019.269999999997 22845.6 19691.82 29157.059999999998 24633.370000000003 21127.47 23943.760000000002 31898.93 31868.65 30154.93 True False 25185.067795868035 27343.539705712228 26085.44960671264 24516.31678399939 24868.095098123835 27240.05686309238 24966.057820598668 27337.86130468967 24673.873287123868 24669.499831261346 22666.62864727061 1.111107795860973 1.206334657492383 1.150830589438086 1.0816040252616708 1.0971236827986908 1.2017692303073257 1.1014455748629801 1.2060841393800108 1.0885550591174908 1.0883621122116858 1.0 14.46828220531891 -9.660307174317063 0.8152350145017483 1.0110434803625452 1.1438171742008236 0.31456738718132604 0.05072689025899427 0.2728609798371356 0.3837803343871194 0.01613335581912694 0.009611124269573595 2.186214778186883e-10 9.660307174317063 0.13277369383827842 GSGTAS(ph)DDEFENLR ddPTM_A549_PD325901_60min_R1 7 GSGTASDDEFENLR 14 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GSGT(0.001)AS(0.999)DDEFENLR;GSGT(0.002)AS(0.998)DDEFENLR;GSGT(0.001)AS(0.999)DDEFENLR;GSGT(0.047)AS(0.953)DDEFENLR;GSGT(0.001)AS(0.999)DDEFENLR;GSGT(0.001)AS(0.999)DDEFENLR;GSGT(0.004)AS(0.995)DDEFENLR 319.29 1.2818999999999996e-156 1847424400.0 29104.7 29762.47 30502.899999999998 31762.719999999998 35241.19 32941.49 31597.260000000002 31675.859999999997 34016.53999999999 35522.299999999996 35976.8 True False 32059.38771825227 32270.657798297547 32573.010222838468 33724.63107602902 32765.97038990543 32673.22542715621 32799.71101998412 31044.06012306853 32586.94311950432 33279.41591572636 31551.88167572553 1.0160848106538505 1.022780768828916 1.032363475421453 1.0688627519155252 1.0384791223121872 1.0355396791530624 1.0395484921337863 0.9839051896214579 1.0328050622912648 1.0547521779447437 1.0 14.945438426065916 -11.752932729337639 0.2754132164559461 0.9705604731888477 1.0356587965906452 0.0 0.024923625537284028 8.277571768933601 0.49679318095897446 0.18118925048653348 0.010225186931690193 1.7663113948171342e-12 11.752932729337639 0.06509832340179744 GSGVTS(ph)SPHK ddPTM_A549_MK2206_60min_R1 2 GSGVTSSPHK 10 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GS(0.001)GVT(0.062)S(0.684)S(0.253)PHK;GSGVT(0.066)S(0.523)S(0.41)PHK 60.255 0.0024896000000000002 8917900.0 1921.48 2075.84 2040.99 1509.14 2164.5 1487.52 1475.99 2124.16 3108.3 3014.3 3435.9 True False 2245.7788483243216 2181.4913893704806 2330.4330721366237 1878.8793677478695 1846.1049172958114 1644.9283790641377 1744.1582774759804 2425.2661849671736 2404.27501293514 2333.367536477732 2582.6712039841264 0.8695566221747074 0.8446647742094423 0.9023344003455064 0.7274946051396086 0.7148044685083955 0.6369097144563385 0.6753311357579609 0.939053403788243 0.9309257056129383 0.9034706132465452 1.0 11.334648272456045 -8.37907388455999 5.9385881607015065 0.9656706526834428 0.7672611933488562 0.5218292413651202 0.08030515665556567 0.13791702317946303 6.274364613247166 0.014507827224377686 0.01755460949617157 4.177592890984715e-09 8.37907388455999 -0.19840945933458654 GSHQIS(ph)LDNPDYQQDFFPK ddPTM_A549_MK2206_60min_R1 2 GSHQISLDNPDYQQDFFPK 19 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GS(0.003)HQIS(0.997)LDNPDYQQDFFPK;GS(0.016)HQIS(0.984)LDNPDYQQDFFPK 144.22 3.7625e-21 20360300.0 2100.4700000000003 2754.6 2759.6000000000004 1873.69 2714.4 2445.3199999999997 2025.77 2726.8 3202.9 3247.1 3118.5 True False 2454.977984438966 2894.797374152114 3150.952775794209 2332.7441341131394 2315.1153557439366 2704.0821393279543 2393.826187008393 3113.33225047477 2477.4482639802973 2513.5778547911077 2344.090383778486 1.047305172798729 1.23493419630259 1.3442112973114653 0.995159636444113 0.987639116548124 1.1535741787265006 1.0212175279477649 1.3281622039916088 1.056891099901553 1.0723041535367002 1.0 11.194812483140272 -11.421059035438445 0.13423719142985163 0.8101088881866878 1.210904255765683 0.039790072270467935 0.12401319783663767 31.362883635508133 0.8106239688160999 2.398814883036502 0.49831218141647626 3.792634266291475e-12 11.421059035438445 0.40079536757899525 GSHQIS(ph)LDNPDYQQDFFPK ddPTM_A549_PD325901_60min_R1 2 GSHQISLDNPDYQQDFFPK 19 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GS(0.008)HQIS(0.992)LDNPDYQQDFFPK;GS(0.006)HQIS(0.994)LDNPDYQQDFFPK 153.1 3.4807e-22 50481000.0 5892.799999999999 5858.0 6091.9 5983.6 7650.5 5813.299999999999 7087.4 6918.4 6204.1 6591.299999999999 7936.7 True False 6491.032717949917 6351.674218652786 6505.332967570615 6353.193382258426 7113.155272792188 5765.958412193473 7357.114885374095 6780.407084620195 5943.363252338915 6175.124193121701 6960.536214886553 0.9325477976922948 0.9125265672877918 0.9346022729768446 0.9127448211059949 1.0219263363042674 0.8283784803621556 1.0569753045231451 0.9741213715861265 0.853865717935322 0.8871621384448679 1.0 12.764982735098078 GSIDREDGSLQGPIGNQHIY(ph)QPVGKPDPAAPPK ddPTM_A549_MK2206_60min_R1 3 GSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 33 2 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 1 GSIDREDGSLQGPIGNQHIY(1)QPVGKPDPAAPPK;GSIDREDGSLQGPIGNQHIY(1)QPVGKPDPAAPPK;GSIDREDGSLQGPIGNQHIY(1)QPVGKPDPAAPPK 116.94 1.4251e-21 21277100.0 4162.3 4466.2 3716.41 3400.4900000000002 6167.400000000001 3966.7999999999997 3883.8499999999995 4000.7 6422.400000000001 5437.1 6333.5 True False 4864.794481535236 4693.510503317427 4243.452821238351 4233.610202653798 5260.18362990538 4386.564143051267 4589.495271631299 4567.811476629902 4967.736654465351 4208.855333770053 4760.7171542924625 1.0218616909742122 0.9858830825699361 0.8913473923592112 0.8892799268355184 1.1049141252095975 0.9214082670498827 0.9640344349155919 0.9594797020258538 1.043484940075936 0.8840801075474884 1.0 12.216963202104694 -8.75047525401108 24.946547193511535 1.0205345551515907 0.9657164306862726 0.0 0.07127502548272875 286.0093296910396 650753.9860579311 0.009781465591282934 0.011036943269864825 1.7763344804909721e-09 8.75047525401108 -0.054818124465318196 GSIDREDGSLQGPIGNQHIY(ph)QPVGKPDPAAPPK ddPTM_A549_PD325901_60min_R1 1 GSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 33 2 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 1 GSIDREDGS(0.002)LQGPIGNQHIY(0.998)QPVGKPDPAAPPK 58.498000000000005 0.013763999999999998 3744200.0 1428.2 1488.0 1441.4 1335.9 1515.2 1428.5 1069.8 1439.1 1458.1 1194.5 1535.2 True False 1573.1898126147287 1613.3989821364537 1539.2220718423305 1418.4155089509704 1408.7775791562294 1416.8667696176647 1110.5118244170221 1410.396021547889 1396.8211276793363 1119.0790661453555 1346.3801324346184 1.1684588733272356 1.1983235219157558 1.1432299354113327 1.0535030002159143 1.04634459854126 1.0523527015030945 0.8248129912678652 1.0475466679662842 1.037464155946439 0.8311761583422645 1.0 10.394870077784292 -6.315235111448611 1.4370710297338523 1.0083475501675614 1.1896990542821695 0.5077819584422514 0.08028664193929184 0.23396163265419997 0.8978180603661048 0.008860892727864042 0.03405349066858011 4.839103249745938e-07 6.315235111448611 0.1813515041146081 GSISLNSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 GSISLNSSPR 10 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 GSISLNS(0.007)S(0.993)PR 99.17399999999999 0.00047908 18517000.0 3445.4 3670.3 3976.6 3675.2 4629.7 4247.1 3380.0 3495.9 5736.9 4753.8 5571.8 True False 4026.899288057444 3857.102592881183 4540.541675686062 4575.624164985997 3948.677262926506 4696.52530300319 3994.1022485713415 3991.4545307447365 4437.501309946791 3679.913278342511 4188.168286143006 0.9614941456342293 0.9209521512406298 1.0841354419087983 1.0925120129783057 0.9428172396966756 1.1213793195803845 0.9536632665373661 0.9530310766047492 1.0595327137710127 0.8786450369050093 1.0 12.032103697491022 -5.744953780127168 24.988038541097637 1.0262934496603364 0.9412231122340852 0.07985021556781391 0.0731131139917784 249.663527144744 378420.9234669848 0.007572676085643831 0.029152962424038885 1.7990623704957016e-06 5.744953780127168 -0.08507033742625125 GSISTPNS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 GSISTPNSPVK 11 0 Q96AY4;A0A087WW06 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 GS(0.001)IS(0.014)T(0.057)PNS(0.928)PVK;GSIS(0.001)T(0.008)PNS(0.991)PVK 99.844 0.00027219 12588200.0 10578.6 10803.8 10505.8 10796.4 12865.400000000001 12197.3 10129.0 12008.2 12530.8 12019.0 14186.0 True False 11652.531684446274 11714.27414193939 11218.78676450753 11463.269107596578 11961.778687220534 12097.969232801923 10514.464637801475 11768.687030749341 12004.174053030813 11260.11828882463 12441.211932463193 0.9366074420805425 0.9415701786554262 0.9017438835869392 0.921394890612317 0.9614641043135307 0.9724108309122491 0.8451318645545934 0.945943779001223 0.96487175993747 0.9050660297364838 1.0 13.602839408731082 -9.096310967853071 1.4251953403223998 0.9889877527917135 0.927552832403454 0.0 0.0410925643752074 0.26870925106117133 1.1195563603105259 0.007045533625915112 0.006602942973736107 8.011042433504222e-10 9.096310967853071 -0.061434920388259484 GSIT(ph)EYTAAEEKEDGRR ddPTM_A549_MK2206_60min_R1 1 GSITEYTAAEEKEDGRR 17 2 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 GS(0.448)IT(0.552)EYTAAEEKEDGRR 141.86 1.2072000000000002e-16 8434200.0 2015.1 2057.6 1616.4 1892.7 2296.4 1670.6 1546.1 1831.9 2230.8 2445.2 2615.6 True False 2355.199615535075 2162.323051279821 1845.6298256246412 2356.4115849665327 1958.6026020226864 1847.3817831454699 1827.00635695744 2091.577434958462 1725.5273618555848 1892.8276217348468 1966.0743331123967 1.1979199239159348 1.099817547517012 0.9387385789747401 1.1985363652228815 0.9961996700918819 0.9396296732183923 0.9292661656719738 1.0638343625835283 0.8776511308827201 0.9627446886702414 1.0 10.941102152620003 -4.097003436795263 0.3858241689645466 0.9464467151879962 1.6841396938274953 0.40970161443344577 0.0794420572082426 8.726967180198315 0.4446962096489189 0.020021673077072123 3.625645875703213 7.998279255328656e-05 4.097003436795263 0.7376929786394991 GSKPGGVGTGLGGSSGTET(ph)LEK ddPTM_A549_MK2206_60min_R1 2 GSKPGGVGTGLGGSSGTETLEK 22 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 1 GSKPGGVGTGLGGSS(0.004)GT(0.052)ET(0.944)LEK;GSKPGGVGTGLGGSSGT(0.004)ET(0.996)LEK 140.55 3.7219999999999996e-25 33665000.0 3893.5 4322.8 3759.7 3626.8 5265.8 5099.9 3997.6 4747.5 6471.1 6147.6 6045.4 True False 4550.6276130642755 4542.81205582835 4292.881994185205 4515.366162813241 4491.20779556308 5639.568032960363 4723.912174227453 5420.472663608981 5005.406182223269 4758.852890306371 4544.160335447959 1.001423206299713 0.9997032940037146 0.9447030204232476 0.9936634778464789 0.9883471233460209 1.241058329075094 1.0395566673511254 1.1928436198267716 1.1015029868504498 1.0472458141900591 1.0 12.149798024230641 -7.05202068251433 24.999421998530156 1.0741847084618208 0.9840553981507886 0.3857688733624932 0.0689457160135445 369.3995747655558 177520.60068655014 0.011202716291101724 0.019403796565310823 8.871137637921435e-08 7.05202068251433 -0.09012931031103222 GSKPGGVGTGLGGSSGTET(ph)LEK ddPTM_A549_PD325901_60min_R1 2 GSKPGGVGTGLGGSSGTETLEK 22 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 1 GSKPGGVGTGLGGSSGT(0.006)ET(0.994)LEK;GSKPGGVGTGLGGSSGT(0.01)ET(0.99)LEK 200.06 7.008499999999999e-61 69055000.0 10710.0 11263.1 11202.599999999999 12845.7 13376.0 13123.1 12291.3 13914.6 12225.2 13336.7 12694.2 True False 11797.271315714714 12212.280964852887 11962.875802706318 13639.149714298588 12436.51590469491 13016.22982454994 12759.05214755744 13637.06238720747 11711.417358278186 12494.618485944548 11132.89387516385 1.059676975995703 1.0969547632262102 1.0745522176757705 1.2251216859909078 1.1170964211236472 1.1691685890932264 1.1460678859089237 1.2249341941209122 1.0519652382930689 1.1223154218525824 1.0 13.442541033925682 -8.943779066680614 7.315889909379225 1.0226623936393016 1.1392361359852714 0.2267752445102269 0.059487469484461014 0.13191589265861045 13.96154500415254 0.009239122506737292 0.009749938933724155 1.1382061642672128e-09 8.943779066680614 0.11657374234596984 GSKPGGVGTGLGGSSGTET(ph)LEKK ddPTM_A549_PD325901_60min_R1 1 GSKPGGVGTGLGGSSGTETLEKK 23 2 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 1 GSKPGGVGTGLGGS(0.025)S(0.121)GT(0.121)ET(0.732)LEKK 64.733 0.00023778 16590000.0 2511.1 2258.1 2570.0 2735.0 2987.4 2840.9 2900.0 2727.7 2668.8 2784.8 2930.8 True False 2766.0250234258833 2448.3980118026398 2744.4156546654553 2903.934738364328 2777.5753299705093 2817.7646522973937 3010.3610869408894 2673.2938836607455 2556.639617001997 2608.967252743058 2570.3301798719253 1.0761360719671078 0.9525616712498154 1.067728837390924 1.1297905464071645 1.0806297773420341 1.0962656371399715 1.1711962573971295 1.0400585514635907 0.9946736170406674 1.0150319492700575 1.0 11.32773798192835 -8.540220001879316 6.231122310571162 0.9982405144047471 1.0806913960172775 0.322694176188578 0.050250072310638196 0.13558582933345553 19.71246511574856 0.008779921318903431 0.010095143381959274 2.88257090048048e-09 8.540220001879316 0.08245088161253034 GSKPS(ph)PLSVK ddPTM_A549_MK2206_60min_R1 2 GSKPSPLSVK 10 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 GS(0.117)KPS(0.882)PLS(0.001)VK;GS(0.074)KPS(0.924)PLS(0.001)VK 71.344 0.00074494 168183000.0 16358.3 16099.5 16607.2 14657.5 23024.8 16761.2 16763.6 16080.400000000001 24394.3 23437.6 23251.3 True False 19119.1811179631 16918.895783475633 18962.350680594867 18248.588158000166 19637.882420768132 18534.859058815917 19809.329128446898 18359.845944159646 18869.029999692335 18143.029881879847 17477.360506765657 1.0939398492445056 0.9680463921841151 1.084966501277716 1.0441272382598024 1.1236183182904602 1.0605067654032136 1.1334279636091795 1.050493061412355 1.0796269832843437 1.0380875232765556 1.0 14.093199699895237 -10.714501369558564 0.8872789751116977 0.9983992167196173 1.0704259995329972 0.15801520002887237 0.043262492441100045 0.6438855573206939 0.868518821384006 0.030805505072948613 0.007324002259457476 1.9297392506988233e-11 10.714501369558564 0.07202678281337993 GSKPS(ph)PLSVK ddPTM_A549_PD325901_60min_R1 2 GSKPSPLSVK 10 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 GS(0.017)KPS(0.982)PLS(0.001)VK;GS(0.405)KPS(0.587)PLS(0.008)VK 93.23700000000001 0.00016823 283830000.0 25661.0 24296.0 27329.0 25569.0 29808.0 28144.0 28503.0 28313.0 28689.0 27798.0 28303.0 True False 28266.08582937023 26343.509186819407 29183.710282627322 27148.339058587742 27714.388912017483 27914.804595113455 29587.697262440066 27748.275003881172 27483.301098684922 26042.829535963643 24821.910427499355 1.1387554520402745 1.061300630495964 1.1757237770987876 1.0937248016377907 1.1165292451186049 1.1246033892777079 1.19199919558411 1.117894413684605 1.1072194132260305 1.0491871531013048 1.0 14.599326536847371 -10.255772041570522 0.686925974049042 0.9993256800386194 1.1269987166227085 0.5230715645049273 0.0363835717252926 0.33321418784693874 0.2916369340362556 0.02223033231686397 0.007040401274057793 5.549169089070328e-11 10.255772041570522 0.12767303658408902 GSKS(ph)PAKVSDGGSSSTDFK ddPTM_A549_MK2206_60min_R1 3 GSKSPAKVSDGGSSSTDFK 19 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659;A0A087X146 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GS(0.108)KS(0.74)PAKVS(0.12)DGGS(0.008)S(0.008)S(0.009)T(0.009)DFK;GS(0.033)KS(0.965)PAKVS(0.001)DGGSS(0.001)STDFK;GS(0.13)KS(0.87)PAKVSDGGSSSTDFK 105.16 5.3933e-10 49702500.0 3082.77 4578.3 5100.21 4241.12 5614.5 3489.42 3577.2 2563.84 7274.6 7336.7 7568.7 True False 3603.066209509735 4811.315914499613 5823.496469283007 5280.19459039111 4788.614487483179 3858.668108310468 4227.130935973197 2927.2721714307027 5626.91471514911 5679.334374440557 5689.182904506726 0.6333187506865953 0.8456954179990057 1.0236085861591624 0.9281112382954619 0.841705139008599 0.6782464499873606 0.7430119591733718 0.5145329690686942 0.9890549855044579 0.9982689025416344 1.0 12.474005748395241 -8.939388217661474 24.999998806638015 0.9951737562980647 0.7871452681818787 0.3498616770918448 0.13280568313317312 61.19421611691794 25240.04448547643 0.024103137831509084 0.025659384668163043 1.149772143288253e-09 8.939388217661474 -0.20802848811618602 GSKS(ph)PAKVSDGGSSSTDFK ddPTM_A549_PD325901_60min_R1 1 GSKSPAKVSDGGSSSTDFK 19 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659;A0A087X146 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GS(0.323)KS(0.576)PAKVS(0.063)DGGS(0.024)S(0.006)S(0.007)T(0.002)DFK 60.464 0.00059583 72568000.0 1892.7 1898.8 2742.3 2524.4 2099.8 4008.6 3263.0 3396.5 3049.5 2564.9 2804.0 True False 2084.8455106679035 2058.8185398391793 2928.4089687895244 2680.326454671632 1952.3172919167441 3975.955290647094 3387.1752505821137 3328.7541429972953 2921.340119921908 2402.9517762714263 2459.1257760205003 0.8477994623120584 0.8372156316342951 1.1908333430299143 1.0899509414313453 0.7939070506088944 1.616816565227182 1.37738999916606 1.353633138840128 1.187958805689634 0.9771569228801391 1.0 11.263929810486898 -5.757046062125421 24.386540303714625 1.1480424947148895 0.842507346172218 0.26024238534394484 0.21277438646228694 88.96803062983395 493818.04708250694 0.0300548832159057 0.10871431855806916 1.7496611062910938e-06 5.757046062125421 -0.3055351485426715 GSKS(ph)PLKR ddPTM_A549_PD325901_60min_R1 2 GSKSPLKR 8 2 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 GS(0.236)KS(0.764)PLKR;GS(0.003)KS(0.997)PLKR 50.108000000000004 0.0094061 659970000.0 13187.6 11880.0 11606.5 12029.0 14755.0 14974.7 10474.4 12011.2 13753.5 14751.599999999999 14351.5 True False 14526.395443802003 12881.169292863626 12394.186885554327 12772.004010158866 13718.659701986648 14852.75100804597 10873.009023811614 11771.627193395885 13175.4882240846 13820.181458476198 12586.356481654144 1.1541382500150585 1.0234232052492078 0.9847319121796746 1.0147499023069402 1.0899627483126628 1.180067562022045 0.8638726417498263 0.935268853266169 1.0468071711848599 1.0980287646087632 1.0 13.61957308940515 -7.745852561639928 24.999582884584658 1.0039823048629304 1.0660948820783116 0.21491262250524734 0.07829725373377044 392.3993868739134 629365.0213091661 0.01177858957681964 0.017433469717030147 1.7953430232568374e-08 7.745852561639928 0.062112577215381215 GSKS(ph)PSPRPNMPVR ddPTM_A549_MK2206_60min_R1 2 GSKSPSPRPNMPVR 14 2 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 GS(0.168)KS(0.416)PS(0.416)PRPNMPVR;GS(0.372)KS(0.53)PS(0.098)PRPNMPVR 43.45399999999999 0.017513 28226000.0 4716.7 5544.1 5362.3 4550.200000000001 6324.9 5926.3 5473.5 5603.9 8004.5 8521.6 8018.200000000001 True False 5512.7636477565875 5826.27100923428 6122.754772300803 5664.999204266242 5394.515588544363 6553.417132440438 6467.964099868415 6398.269986223986 6191.493530559901 6596.564641491767 6027.059648937839 0.9146688383494119 0.9666854732823253 1.0158775802691498 0.9399275159429684 0.8950493113993072 1.0873323833115474 1.0731541541999303 1.0615906194576268 1.0272826039893335 1.094491348306847 1.0 12.55723862766931 -7.2594210583155165 24.9999687717315 1.026917981210126 0.951062042047437 0.5667074744199534 0.04401628398455805 139.56739629665918 1728750.8766136975 0.00643463291335944 0.010792064066869967 5.50273934683996e-08 7.2594210583155165 -0.07585593916268885 GSKS(ph)PSPRPNMPVR ddPTM_A549_PD325901_60min_R1 2 GSKSPSPRPNMPVR 14 2 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 GS(0.128)KS(0.861)PS(0.011)PRPNMPVR;GS(0.195)KS(0.799)PS(0.006)PRPNMPVR 61.126999999999995 0.0021962 37824000.0 7857.4 7318.8 7347.700000000001 8160.400000000001 9335.8 9002.2 7639.200000000001 8747.1 8408.0 8712.0 9082.9 True False 8655.077463687838 7935.580961330832 7846.35910730948 8664.44937438693 8680.085614761565 8928.889067869895 7929.913936330635 8572.632228532797 8054.640999607607 8161.922833200778 7965.7608812470025 1.0865349327850933 0.99621129476944 0.9850106253856279 1.0877114570165896 1.089674388192624 1.1209084983821558 0.9954998718326132 1.0761849817403497 1.0111577688165165 1.024625639016554 1.0 12.959596457733898 -8.870471379809468 6.570594131344301 1.0049053958259668 1.0528730979615588 0.1586197826541822 0.04307041708483917 0.25691037896912833 14.075780839633317 0.007574478835093179 0.008037170447295301 1.3474995232084893e-09 8.870471379809468 0.04796770213559198 GSKSPAKVS(ph)DGGSSSTDFK ddPTM_A549_PD325901_60min_R1 1 GSKSPAKVSDGGSSSTDFK 19 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659;A0A087X146 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GS(0.093)KS(0.341)PAKVS(0.529)DGGS(0.028)S(0.007)S(0.002)T(0.001)DFK 72.227 0.00015209999999999998 23428000.0 2268.7 2110.8 2548.3 2816.9 2894.2 4525.6 4168.8 3981.9 3547.6 2253.3 3140.4 True False 2499.016753871331 2288.6845238532446 2721.2429621727547 2990.8935153559332 2690.921376447964 4488.745014057896 4327.44596525489 3902.477880759878 3398.5067091113187 2111.0262534494163 2754.150708635797 0.9073638367121745 0.8309946571467361 0.9880515810700343 1.0859585519332025 0.9770421669411287 1.6298109613185578 1.571245157966823 1.4169442029891233 1.2339581484975048 0.7664890112331808 1.0 11.427391791358103 -6.438878938154136 1.5991467561944879 1.2049448191640817 0.8827253766551825 0.25990643064408836 0.2420929113195812 0.46657895797003923 2.297522089627308 0.03664330503417747 0.11679937150373226 3.640164934766995e-07 6.438878938154136 -0.3222194425088992 GSLAEAVGS(ph)PPPAATPTPTPPTR ddPTM_A549_MK2206_60min_R1 2 GSLAEAVGSPPPAATPTPTPPTR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGS(0.875)PPPAAT(0.109)PT(0.015)PTPPTR;GSLAEAVGS(1)PPPAATPTPTPPTR 178.07 6.391799999999999e-41 21764000.0 3057.0 3188.0 3477.6 3132.3 4359.8 2817.3 2783.8999999999996 3408.6000000000004 4470.7 5274.0 4582.4 True False 3572.9468635257444 3350.2555829510443 3970.7759722792935 3899.7136406142886 3718.4791953921367 3115.424816027615 3289.6985946147192 3891.7794883997 3458.0935882408803 4082.599737047923 3444.4636121938547 1.0373013815204906 0.9726494340339954 1.1527995123020676 1.1321686275937968 1.0795524685551128 0.9044731391554265 0.9550684707391749 1.1298651768659387 1.0039570677996927 1.185264295606138 1.0 11.75006362193764 GSLAEAVGS(ph)PPPAATPTPTPPTRK ddPTM_A549_MK2206_60min_R1 1 GSLAEAVGSPPPAATPTPTPPTRK 24 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGS(1)PPPAATPTPTPPTRK 127.53 8.1693e-23 5544600.0 1288.2 1713.8 1417.2 1458.9 1845.7 1806.8 1535.2 1619.7 2688.2 2112.6 2469.8 True False 1505.6166665338126 1801.025099768349 1618.1802702766906 1816.330565492509 1574.1999749840052 1997.9943767432273 1814.1259680493251 1849.2974351232158 2079.3269921732917 1635.3621927355778 1856.4804969876873 0.8110059162898916 0.9701287477518241 0.8716387125543947 0.9783730927632555 0.8479485658687455 1.0762269681718497 0.9771855782987829 0.9961308174924937 1.1200370785188392 0.8808938178392423 1.0 10.858354443890862 -7.372878669611399 1.073151870427085 1.0526782510036687 0.8961424842176201 0.17212173047332602 0.08298349971602777 0.31019301995741605 0.7082732773718874 0.011531375206627071 0.02389382155667505 4.237613372205244e-08 7.372878669611399 -0.15653576678604864 GSLAEAVGSPPPAAT(ph)PTPTPPTR ddPTM_A549_MK2206_60min_R1 2 GSLAEAVGSPPPAATPTPTPPTR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGSPPPAAT(0.965)PT(0.028)PT(0.007)PPTR;GSLAEAVGSPPPAAT(0.997)PT(0.002)PTPPTR 180.8 1.9666e-42 9472300.0 1718.4 1630.47 1547.67 2135.3 2511.8999999999996 1563.8200000000002 1558.75 1995.08 2446.73 2455.6400000000003 2686.9 True False 2008.423909153628 1713.4539586995563 1767.1528781393765 2658.4485958572595 2142.4028374938093 1729.3023944202973 1841.9546982131885 2277.888699676253 1892.54956162494 1900.9092184839508 2019.6685753325041 0.9944324200929725 0.8483837297005352 0.8749717155194361 1.3162796254427989 1.0607695062746119 0.856230777436143 0.9120083961844789 1.127852721727493 0.9370594684394512 0.9411985915416832 1.0 10.9799028529097 GSLAEAVGSPPPAAT(ph)PTPTPPTR ddPTM_A549_PD325901_60min_R1 2 GSLAEAVGSPPPAATPTPTPPTR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGS(0.008)PPPAAT(0.961)PT(0.025)PT(0.005)PPT(0.001)R;GSLAEAVGS(0.024)PPPAAT(0.94)PT(0.034)PT(0.001)PPTR 146.89 3.2753000000000004e-27 9907800.0 1497.19 1852.19 1831.59 2151.1 2499.1000000000004 1970.42 1935.33 1954.9 2815.3 1769.0 2032.9899999999998 True False 1649.183626626976 2008.2805515613709 1955.8927116454074 2283.9685614974424 2323.5718374269604 1954.3735528106681 2008.9800422032106 1915.9079859106175 2696.9827314694726 1657.3050381005705 1782.9451181854195 0.924977224372123 1.1263838303701041 1.0970010751850872 1.2810088982559016 1.3032211781099354 1.0961490249344965 1.1267761535183072 1.0745748516704317 1.5126560565219802 0.9295322784737657 1.0 10.8000465799187 -4.930614316010039 0.9904531713326115 1.2216275564099153 0.5899263368072648 0.06108752783580318 0.1609581368809613 4.609594969116375 2.2426860296577478 0.028524714986356125 3.6126823645155386 1.1732368197015126e-05 4.930614316010039 -0.6317012196026505 GSLAEAVGSPPPAAT(ph)PTPTPPTRK ddPTM_A549_MK2206_60min_R1 2 GSLAEAVGSPPPAATPTPTPPTRK 24 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGS(0.001)PPPAAT(0.958)PT(0.034)PT(0.006)PPT(0.001)RK;GSLAEAVGSPPPAAT(0.924)PT(0.062)PT(0.011)PPT(0.002)RK 91.583 1.4912e-07 7808500.0 2952.4 2641.0 2865.3 2467.2 3591.2 2588.0 2705.3999999999996 2294.08 4439.8 4185.1 4409.0 True False 3450.6929407502134 2775.415619376948 3271.642625193197 3071.6641107568157 3062.9392372338734 2861.860442224636 3196.9361607351784 2619.2728653253494 3434.1923889037225 3239.6830033218143 3314.1236177903947 1.041208276669798 0.8374508435588724 0.9871818322137541 0.9268405361429358 0.9242079024427001 0.8635346089270823 0.9646399861410879 0.7903365014101922 1.0362294183804104 0.977538371209517 1.0 11.694411701176493 GSLAEAVGSPPPAAT(ph)PTPTPPTRK ddPTM_A549_PD325901_60min_R1 2 GSLAEAVGSPPPAATPTPTPPTRK 24 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGS(0.005)PPPAAT(0.862)PT(0.11)PT(0.019)PPT(0.003)RK;GSLAEAVGS(0.002)PPPAAT(0.972)PT(0.021)PT(0.004)PPT(0.001)RK 97.441 4.8145e-08 6873500.0 2702.5 2644.8 2972.3 2894.5 3849.6000000000004 3072.1 3667.1 3007.8 3050.5 3451.6 4161.7 True False 2976.855810524652 2867.686577926409 3174.0181518918803 3073.2866911135466 3579.2173763990354 3047.0818361515085 3806.653497214118 2947.807069426547 2922.2980933995022 3233.665386946257 3649.8372831899146 0.815613294388542 0.7857025821765087 0.8696327824011447 0.8420338915568122 0.9806512177635606 0.8348541591663492 1.0429652616971319 0.8076543803756091 0.8006653082477826 0.8859752191802018 1.0 11.833616431951256 -10.969274709101677 1.2373446249271156 0.9999888217731991 0.861253270164531 0.062373909426871266 0.08219407461902987 0.46184720095139803 1.257759137243752 0.05393796953641585 0.012476133827134783 1.0733102847265439e-11 10.969274709101677 -0.13873555160866813 GSLAPQDS(ph)DSEVSQNR ddPTM_A549_PD325901_60min_R1 2 GSLAPQDSDSEVSQNR 16 0 J3KN34;P26045-2;P26045;P26045-3 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 GSLAPQDS(0.998)DS(0.002)EVSQNR;GSLAPQDS(0.999)DS(0.001)EVSQNR 330.85 1.4032999999999997e-186 48107000.0 10369.1 10854.5 11117.8 11067.7 12974.2 13791.599999999999 12275.7 12580.9 12436.4 12814.6 12617.8 True False 11421.76339867203 11769.246808871058 11872.32076476249 11751.326692429577 12062.936950560155 13679.285782190405 12742.858481020787 12329.964079974878 11913.741356745973 12005.483969046683 11065.890590824338 1.0321594366876152 1.063560742108722 1.072875306991272 1.0619413409141774 1.0901008691123832 1.2361667296379248 1.151543870457834 1.1142315188077758 1.0766183940608143 1.0849089705442634 1.0 13.433831944494202 -9.903764207020258 0.9193287892365407 1.0095493713404384 1.1027793097063743 0.08546274368976314 0.05706392011951503 0.4621174615929261 0.7992695224489842 0.0212584289193293 0.011449533555086882 1.2480609442987296e-10 9.903764207020258 0.09322993836593585 GSLAS(ph)LDS(ph)LR ddPTM_A549_PD325901_60min_R1 2 GSLASLDSLR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 2 GS(0.017)LAS(0.983)LDS(1)LR;GS(0.09)LAS(0.91)LDS(1)LR 51.286 0.029344 10393800.0 2191.46 2124.26 2233.19 2102.89 2713.9 2080.55 2435.29 2371.2 2477.67 2723.52 2836.15 True False 2413.935405932416 2303.27884529112 2384.747702662392 2232.780739290298 2523.2850264467343 2063.606690604154 2527.96629359182 2323.9045558295866 2373.5421462295194 2551.556482401168 2487.321529836142 0.9704959238186788 0.9260076824257031 0.9587613318409594 0.8976647017715427 1.0144587244468397 0.8296501541319024 1.0163407759182448 0.9343000203044434 0.9542562623119666 1.0258249493660185 1.0 11.280377297853088 -10.239091875682421 0.48589562284827975 1.0061355519411461 0.9402825591523465 0.2089775999164848 0.05003649125023004 1.60680908052193 0.648008308500774 0.047977725219563803 0.01193006495281764 5.766444604429161e-11 10.239091875682421 -0.06585299278879964 GSLAS(ph)LDS(ph)LRK ddPTM_A549_MK2206_60min_R1 2 GSLASLDSLRK 11 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 2 GS(0.002)LAS(0.998)LDS(1)LRK;GS(0.003)LAS(0.997)LDS(1)LRK 82.069 0.00018091 33669000.0 4162.7 3950.4 3087.5 3350.1 5759.299999999999 4261.5 3573.6000000000004 3886.6000000000004 5785.0 5274.5 5528.4 True False 4865.26199175617 4151.458486477356 3525.3539263895595 4170.874650391705 4912.1145992985785 4712.44910144524 4222.876862572352 4437.537452213306 4474.706736746709 4082.986786700655 4155.54570392207 1.1707877468810555 0.999016442668202 0.8483492127308995 1.0036887926548772 1.1820624652647778 1.1340145042798002 1.0162027236487219 1.0678591377361313 1.0768036391762963 0.9825392566004189 1.0 12.02082222799875 -5.2506634459214006 23.797354505221 1.0373159717541611 1.170787898673113 0.18605418236659244 0.0830876505858215 1103.12836800068 2436030.7799290186 0.011659945492194328 0.22281076195515231 5.614829255311528e-06 5.2506634459214006 0.13347192691895193 GSLAS(ph)LDS(ph)LRK ddPTM_A549_PD325901_60min_R1 4 GSLASLDSLRK 11 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 2 GS(0.006)LAS(0.994)LDS(1)LRK;GS(0.021)LAS(0.98)LDS(0.999)LRK;GS(0.003)LAS(0.997)LDS(1)LRK;GS(0.002)LAS(0.998)LDS(1)LRK 75.08800000000001 0.0012651 131024000.0 16406.2 16322.199999999999 17781.3 19244.7 19220.7 20303.7 19355.499999999996 20969.399999999998 19876.4 21336.299999999996 21079.7 True False 18071.7453463939 17697.729076765874 18988.045945643145 20433.401411115163 17870.70433981529 20138.353398870284 20092.084144236007 20551.14886682392 19041.064030042915 19989.12237672425 18487.030535228 0.9775364038025061 0.9573051249654144 1.0271009132299767 1.1052830454397882 0.9666616986303846 1.0893233156344715 1.086820520253347 1.1116522379114717 1.0299687661444155 1.0812511148631434 1.0 14.174225891141646 -5.800269618473388 6.875526798738044 1.0344365969399851 0.967407213150453 0.25906317006449797 0.04764665776994137 0.19544005461733582 25.51848946285707 0.0067897720561249765 0.021952648183984416 1.5839095652563431e-06 5.800269618473388 -0.06702938378953216 GSLAS(ph)LDSLR ddPTM_A549_MK2206_60min_R1 3 GSLASLDSLR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GS(0.075)LAS(0.925)LDSLR;GSLAS(1)LDSLR;GSLAS(0.996)LDS(0.004)LR 153.1 2.0350999999999998e-08 104613000.0 5428.2 6049.3 4365.6 3815.86 6624.5 5665.459999999999 5417.8 5751.0 7233.0 6712.099999999999 7560.1 True False 6344.347453251699 6357.183531350607 4984.707725035223 4750.745871300463 5650.044825422089 6264.975216772017 6402.144130860892 6566.221861698846 5594.737048727561 5195.831948244093 5682.718521854653 1.1164282427244192 1.1186870345420226 0.8771695634518913 0.8359988011072516 0.9942503405180273 1.1024609423602658 1.1265988463513483 1.155471951750981 0.9845177140502857 0.9143215396402115 1.0 12.472365541810706 -5.629637679321485 24.907221118333393 1.0033500012433545 1.1176389881582405 0.18521862058676608 0.09556538486444105 10.383042876269306 2375.0305510999683 0.013407790727123479 0.0519281522476274 2.346185360957859e-06 5.629637679321485 0.11428898691488598 GSLAS(ph)LDSLR ddPTM_A549_PD325901_60min_R1 2 GSLASLDSLR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GSLAS(1)LDSLR;GSLAS(1)LDSLR 141.88 4.9836e-08 184085000.0 7086.1 6140.700000000001 5337.6 4858.4 6261.9 5348.200000000001 5182.0 5271.9 5596.6 5940.8 5570.9 True False 7805.4756554888945 6658.198339788527 5699.841633596237 5158.492333773032 5822.085746382254 5304.646032390062 5379.203845699203 5166.747818774457 5361.394364700757 5565.69687413673 4885.714616844721 1.5976118679911366 1.362789041511497 1.1666341734215524 1.0558316926633091 1.1916548965650102 1.085746190352783 1.1010065604636536 1.0575214117011265 1.0973613453016702 1.1391776455684908 1.0 12.254353880382011 -2.0000000001018132 0.5503481519513278 1.052124474280408 26.460501468376506 0.8940467541119471 0.05313817978038243 23.302358044242535 0.19281388641519365 0.009231813922405812 703.3321081496138 0.009999999997655664 2.0000000001018132 25.4083769940961 GSLAS(ph)LDSLRK ddPTM_A549_PD325901_60min_R1 2 GSLASLDSLRK 11 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GS(0.492)LAS(0.508)LDSLRK;GS(0.191)LAS(0.809)LDSLRK 136.38 3.1110000000000005e-08 17238000.0 5689.6 5693.1 6206.0 5722.700000000001 7446.3 6688.7 5863.8 6794.9 6604.0 6380.799999999999 6804.9 True False 6267.204003537854 6172.877516936189 6627.176479709656 6076.178181805314 6923.2975763404365 6634.229444831415 6086.950117794479 6659.370389004073 6326.456846028625 5977.915199045861 5967.940439815231 1.0501451994604505 1.0343396652811272 1.1104629053427408 1.0181365318708566 1.1600815467512915 1.1116447142419559 1.019941498944137 1.1158573809778587 1.060073723896697 1.0016713905460723 1.0 12.54301742219693 -10.077795615510183 0.7270410872801495 1.0022400757204766 1.0776243370453131 0.3076796000741693 0.043030458469026055 0.5849056197893021 0.6106017085133298 0.022194065753355308 0.008764327848759178 8.35996356154296e-11 10.077795615510183 0.07538426132483655 GSLASLDS(ph)LR ddPTM_A549_MK2206_60min_R1 1 GSLASLDSLR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GSLASLDS(1)LR 118.28 6.7219e-05 10133000.0 1278.0 1300.3 1207.6 864.22 1509.3 1267.4 1105.1 1176.8 1582.6 1820.4 1988.2 True False 1493.6951558998703 1366.479715969649 1378.8558385451115 1075.9539387963098 1287.283969357621 1401.515426767969 1305.8823653539014 1343.6150037988518 1224.1436268928849 1409.170375677292 1494.4750684715032 0.9994781361107412 0.9143543072734139 0.9226355578854567 0.7199544251325369 0.8613619567934377 0.9377977969223602 0.8738067251195513 0.8990548133887936 0.8191127792749973 0.9429199626050251 1.0 10.545423114168864 -10.98096318850137 1.2425812865558379 1.0002357531082837 0.8752926780026912 0.17228765384676248 0.06994443261978495 0.4715343652233487 1.2911421364113789 0.04997469115575018 0.011399704886939498 1.0448087751395051e-11 10.98096318850137 -0.12494307510559255 GSLASLDS(ph)LR ddPTM_A549_PD325901_60min_R1 2 GSLASLDSLR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GSLASLDS(1)LR;GSLASLDS(1)LR 150.04 2.8388e-08 28843000.0 4570.4 4555.0 4385.6 4484.7 5422.0 4849.5 4575.5 5402.6 5555.5 5794.6 6111.7 True False 5034.3836434493505 4938.86583577389 4683.233188755183 4761.70973350731 5041.177424884552 4810.0072798466 4749.623156309668 5294.840904742294 5322.0216547716545 5428.7279670873795 5359.999645258377 0.9392507419105751 0.9214302542245435 0.8737375930422153 0.8883787404201915 0.9405182385308802 0.8973894772738804 0.8861237818385553 0.987843517755878 0.992914553544734 1.0128224489510558 1.0 12.388017189863046 -8.309664012319912 6.642683576559256 0.9960973474301972 0.9062531373745935 0.8194165667363155 0.020704193462577916 0.0683083633016977 7.570356586679638 0.003322333032500835 0.004036559582941914 4.9015787857259476e-09 8.309664012319912 -0.08984421005560372 GSLASLDS(ph)LRK ddPTM_A549_MK2206_60min_R1 4 GSLASLDSLRK 11 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GSLASLDS(1)LRK;GSLASLDS(1)LRK;GSLASLDS(1)LRK;GS(0.382)LAS(0.198)LDS(0.42)LRK 175.74 9.421099999999998e-16 382634100.0 9606.499999999998 10647.800000000001 10617.300000000001 8480.9 12759.5 9758.6 8591.699999999999 9927.0 14062.7 12674.1 13846.6 True False 11227.842343624492 11189.727539569045 12122.9927911436 10558.720880722067 10882.594452407448 10791.248574765588 10152.700677233846 11334.182650162475 10877.520903517354 9811.012007455261 10408.107073281126 1.078759304124352 1.0750972737679105 1.1647644192924183 1.014470816487619 1.045588249216266 1.0368118331976073 0.9754608216221239 1.088976369128513 1.045100787965688 0.9426317329729745 1.0 13.345420088502683 -2.0000000001025 0.13572660249530835 0.9951876710350375 1.3545855607681156 0.3577147078761498 0.046224805461011265 64.31279238904067 0.5610245958192318 0.10004319663899407 4.4916543038218855 0.009999999997639855 2.0000000001025 0.3593978897330782 GSLASLDS(ph)LRK ddPTM_A549_PD325901_60min_R1 2 GSLASLDSLRK 11 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;E9PKY0;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 GSLASLDS(1)LRK;GSLASLDS(1)LRK 151.99 2.2554e-12 481190000.0 4186.3 4594.0 4990.3 4551.0 5227.5 4661.5 5502.3 5094.8 5415.2 5473.4 5538.9 True False 4611.2900942088245 4981.152502644405 5328.97176711168 4832.104933929086 4860.338433895981 4623.538289515402 5711.693037474089 4993.180217206719 5187.617975865266 5127.808589903712 4857.650413980008 0.9492840573578176 1.025424243850271 1.0970266101848825 0.9947411859903701 1.0005533580408004 0.9518054811456076 1.1758139328092034 1.0279002792866 1.0679273998259802 1.0556149893261577 1.0 12.246042953276278 GSLDES(ph)SLGFGYPK ddPTM_A549_MK2206_60min_R1 1 GSLDESSLGFGYPK 14 0 Q2KJU6;Q9BUZ4 Q2KJU6 TRAF4 TNF receptor-associated factor 4 1 GS(0.069)LDES(0.783)S(0.147)LGFGYPK 187.44 3.2803e-26 8800600.0 1865.9 1764.7 1910.7 1301.3 2863.4 2357.7 2260.1 1784.7 3153.7 2573.3 2882.1 True False 2180.818303124857 1854.5156923568716 2181.6659909805767 1620.118558417577 2442.1976531230434 2607.1902490854036 2670.7309147917404 2037.6866904145227 2439.391985424044 1991.9897427655326 2166.395028086573 1.0066577308622349 0.856037642403028 1.007049020467653 0.7478407849968691 1.1273094802475003 1.2034694574553906 1.2327995957185207 0.94058870335124 1.1260143943270542 0.9194951599039255 1.0 11.081080617681783 -6.788903211177011 24.997901837304354 1.0799542168724805 0.9082742971134026 0.3511939394595147 0.11379716472781026 171.72813986018087 156308.5651979369 0.01529261523155235 0.02890507036004697 1.6259110732351094e-07 6.788903211177011 -0.17167991975907793 GSLEKGS(ph)PEDKEAK ddPTM_A549_MK2206_60min_R1 1 GSLEKGSPEDKEAK 14 2 C9JMA6;P0DN79;P35520;P35520-2 C9JMA6 CBS Cystathionine beta-synthase 1 GS(0.125)LEKGS(0.875)PEDKEAK 40.856 0.020699000000000002 15825000.0 1553.5 1635.6 1286.6 1450.3 1946.2 1659.0 1269.5 1516.9 2342.7 2121.0 2061.8 True False 1815.6928205715546 1718.845053787555 1469.0592264592071 1805.6235651064412 1659.9165581155503 1834.5542788449272 1500.1517173258335 1731.9252203114202 1812.082190523166 1641.8646269015253 1549.798157214841 1.1715672857906578 1.109076718013725 0.9479035831990337 1.1650701458771553 1.0710533822666328 1.1837375533739338 0.9679658672596259 1.1175166341815 1.1692375436680595 1.0594054582256944 1.0 10.597864618518454 -11.075447570068338 1.4121402876935125 1.0003194351993332 1.1053416274489405 0.09237913797030894 0.07754893707342583 0.5355929875182942 1.916287110393407 0.05250217955338274 0.011726328335204081 8.405284732531228e-12 11.075447570068338 0.1050221922496073 GSLEKGS(ph)PEDKEAK ddPTM_A549_PD325901_60min_R1 2 GSLEKGSPEDKEAK 14 2 C9JMA6;P0DN79;P35520;P35520-2 C9JMA6 CBS Cystathionine beta-synthase 1 GS(0.211)LEKGS(0.789)PEDKEAK;GS(0.048)LEKGS(0.952)PEDKEAK 60.062 0.0014759999999999999 39561000.0 6429.6 7142.3 6594.5 6657.4 8238.5 7910.2 6792.9 7040.1 6932.1 8258.9 7796.6 True False 7082.328258778649 7744.206686904026 7042.042425949941 7068.612477947599 7659.856181282066 7845.781953818448 7051.4075267175085 6899.679682648388 6640.7679440271095 7737.431644527308 6837.6676267194825 1.035781299328313 1.132580158860321 1.0298895486571804 1.0337753842151753 1.1202440070865285 1.1474354095773196 1.031259182467834 1.0090691825508717 0.9712036774172892 1.1315893177217078 1.0 12.739288580943528 -8.106669484930395 3.098023325160626 0.9875059791111217 1.0827269283934642 0.029451339693889467 0.05845397684934495 0.14554433122603422 2.679110520023607 0.006409497624840572 0.008508921591594179 7.822228802968155e-09 8.106669484930395 0.09522094928234248 GSLGKDTT(ph)SPMELAALEK ddPTM_A549_PD325901_60min_R1 2 GSLGKDTTSPMELAALEK 18 1 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 GS(0.008)LGKDT(0.153)T(0.722)S(0.117)PMELAALEK;GS(0.022)LGKDT(0.072)T(0.503)S(0.402)PMELAALEK 72.771 0.00019798 19990600.0 6348.5 6770.5 7239.8 7297.2 8226.7 7967.2 7765.700000000001 8100.099999999999 7622.5 7482.700000000001 9294.6 True False 6992.99504648131 7341.073796071813 7731.136364454068 7747.931470856368 7648.884972574278 7902.317764716739 8061.227963054094 7938.537151094482 7302.152832957785 7010.241044994431 8151.42312332387 0.8578864010226729 0.9005879936555639 0.9484400757375452 0.9505004652116535 0.9383496423696046 0.9694402615545303 0.988935041292152 0.973883582166131 0.895813249107871 0.8600021050233368 1.0 12.992836240168684 -5.491637062958756 1.6966264413578627 0.9548673312408344 0.8447733236287712 0.3246407626646278 0.03882766845099507 0.48637041931748826 1.8837250674851087 0.005427834676649509 0.07479431738618578 3.223761742364482e-06 5.491637062958756 -0.11009400761206323 GSLGKDTTS(ph)PMELAALEK ddPTM_A549_PD325901_60min_R1 1 GSLGKDTTSPMELAALEK 18 1 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 GS(0.004)LGKDT(0.049)T(0.213)S(0.734)PMELAALEK 67.979 0.00047584 3313700.0 2271.3 1939.6 2034.6 2539.3 2740.9 2588.4 2223.6 2671.2 2799.4 2287.7 3044.4 True False 2501.880703957314 2103.0568990267925 2172.6801910437093 2696.1467938312767 2548.3886395916747 2567.3209285812845 2308.2203148006097 2617.920820484138 2681.7509531757323 2143.2542315786764 2669.9581000416583 0.9370486765010575 0.7876741208013637 0.8137506693493841 1.0098086534725805 0.9544676523395305 0.9615585085553319 0.8645155572908038 0.9805100763353896 1.004416868239951 0.8027295377950823 1.0 11.382601386374008 -6.578318893835273 0.38215745740180057 1.0059924271373304 0.8125898540548261 0.0 0.08586931605751356 1.732889599480797 0.33001056608301915 0.01909776286056021 0.13286733372776358 2.6404692010900095e-07 6.578318893835273 -0.1934025730825043 GSLGS(ph)PGNR ddPTM_A549_MK2206_60min_R1 2 GSLGSPGNR 9 0 E9PNW1;Q9Y6N9-3;Q9Y6N9-2;Q9Y6N9-4;Q9Y6N9;Q9Y6N9-5 E9PNW1 USH1C Harmonin 1 GS(0.001)LGS(0.999)PGNR;GS(0.002)LGS(0.998)PGNR 80.706 0.0016515999999999998 19959800.0 4932.6 5720.200000000001 4881.9 4819.1 5600.1 4768.8 5041.2 5086.8 7093.200000000001 7448.2 7663.0 True False 5765.102289508371 6011.3337470503675 5574.226828580137 5999.779716337622 4776.3327084076145 5273.431250726755 5957.120785650245 5807.86947767165 5486.601525512836 5765.646447000444 5760.065611959128 1.0008744132252219 1.0436224432182775 0.9677366898402773 1.0416165579573948 0.8292149829840353 0.9155158301978339 1.0342105779632074 1.0082991877059997 0.9525241368989753 1.0009688839359276 1.0 12.491869529924976 -6.1104273863068865 2.014953674288519 0.9713318201735496 1.0180721932651733 0.08444577986090074 0.05815959961969089 0.681204344346285 5.268791674781274 0.008373032443487869 0.031443007500913 7.754835927626489e-07 6.1104273863068865 0.04674037309162371 GSLGS(ph)PGNR ddPTM_A549_PD325901_60min_R1 1 GSLGSPGNR 9 0 E9PNW1;Q9Y6N9-3;Q9Y6N9-2;Q9Y6N9-4;Q9Y6N9;Q9Y6N9-5 E9PNW1 USH1C Harmonin 1 GS(0.001)LGS(0.999)PGNR 72.848 0.0024647 11860000.0 5061.7 4514.2 4377.2 4481.3 4184.4 4632.6 4386.2 4161.7 4423.6 4556.9 5444.8 True False 5575.560057773405 4894.627476586277 4674.263114241881 4758.099723229272 3890.5021793963333 4594.873641533634 4553.1192412207365 4078.6916287095105 4237.691475483375 4269.176556314579 4775.124117430961 1.167626206284473 1.0250262309871874 0.9788778258515 0.9964347745141234 0.814743676545405 0.962252190421743 0.9535080406811156 0.8541540551418936 0.8874515868633114 0.8940451496811388 1.0 12.22132251755392 -5.028789994785114 1.0497159248732553 0.934056404469652 1.3816103878807038 0.6374210298888168 0.05522434516291045 1.5029230721324944 0.9415225158796137 0.009107579776085306 0.8400350804581878 9.358581035018865e-06 5.028789994785114 0.4475539834110518 GSLGS(ph)QGAKDEPEEELQK ddPTM_A549_MK2206_60min_R1 2 GSLGSQGAKDEPEEELQK 18 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GS(0.003)LGS(0.997)QGAKDEPEEELQK;GS(0.041)LGS(0.959)QGAKDEPEEELQK 171.58 7.218899999999999e-31 17685000.0 6342.2 7806.7 7441.200000000001 6821.299999999999 10565.0 7729.5 8044.8 7630.799999999999 11344.4 10213.8 11747.4 True False 7412.6083080971475 8204.027684888302 8496.474052485824 8492.518806219787 9010.90249537087 8547.430559573157 9506.43602642211 8712.489268344898 8774.911513284242 7906.49548620782 8830.196368253772 0.8394613210128461 0.9290877963239114 0.9622066937301935 0.9617587709319807 1.0204645649520063 0.9679774042514828 1.0765826296456495 0.986669934053556 0.9937391137564857 0.8953929399161686 1.0 13.108229805928335 -4.552902338834328 0.7427358252235037 1.0012111679352993 0.49601642369520893 0.5104142464264356 0.04216150609154838 2.174987896874702 0.40236059008669967 0.0040405283303819334 1.1759512841358513 2.7996108061390312e-05 4.552902338834328 -0.5051947442400904 GSLGS(ph)QGAKDEPEEELQK ddPTM_A549_PD325901_60min_R1 2 GSLGSQGAKDEPEEELQK 18 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GS(0.018)LGS(0.982)QGAKDEPEEELQK;GS(0.05)LGS(0.95)QGAKDEPEEELQK 157.3 3.6443000000000005e-23 25183000.0 10825.0 10333.2 9490.0 10468.1 12566.6 11034.7 11106.599999999999 12117.6 12402.7 12319.9 13248.0 True False 11923.946031056188 11204.015028368556 10134.048468005903 11114.69076221997 11683.965368416484 10944.837061743126 11529.267740764715 11875.904961926704 11881.457650551065 11542.019411472713 11618.579985991286 1.0262825616756168 0.9643187929916929 0.8722278006627913 0.9566307393520669 1.005627656951541 0.9420115947852059 0.9923129809895653 1.0221477130807448 1.022625627647848 0.9934105050177489 1.0 13.504146133975599 -7.951661428556254 4.837062154752417 1.011710953461086 0.9592435915314778 0.2712432559554827 0.03725122080227174 0.19136229113628211 9.890808351264354 0.005899610896601372 0.00815499186814356 1.1177342821882274e-08 7.951661428556254 -0.052467361929608214 GSLLLDGAGAGGAGGS(ph)RPCSNR ddPTM_A549_PD325901_60min_R1 2 GSLLLDGAGAGGAGGSRPCSNR 22 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GSLLLDGAGAGGAGGS(0.987)RPCS(0.013)NR;GSLLLDGAGAGGAGGS(0.99)RPCS(0.01)NR 89.197 5.5957e-07 11844100.0 4454.1 4687.2 4779.5 5632.0 5639.5 4591.0 4587.6 5483.299999999999 4781.6 5069.4 6219.299999999999 True False 4906.276953064885 5082.206793729829 5103.865611468302 5979.875848799958 5243.400975218815 4553.612418141201 4762.183628431048 5373.931279934365 4580.645980461912 4749.317218850781 5454.365527390977 0.8995137800036179 0.9317686481054075 0.9357395623445992 1.0963467370805915 0.9613218895740062 0.8348564824402885 0.8730957990468554 0.9852532348533145 0.8398127990246745 0.8707368794776307 1.0 12.41319567117924 -7.029186696302858 24.772926264029536 0.9170154859246865 0.9697052000001738 0.15648892832264805 0.06867683601126512 1229.4618000922665 1043534.3002942449 0.011733436109553774 0.02034691547935749 9.35003644518119e-08 7.029186696302858 0.05268971407548728 GSLLPT(ph)SPR ddPTM_A549_PD325901_60min_R1 1 GSLLPTSPR 9 0 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128 H7C179 BRD8 Bromodomain-containing protein 8 1 GS(0.004)LLPT(0.558)S(0.438)PR 45.368 0.0506 92594000.0 1167.3 1599.2 1315.9 1156.3 1368.7 1501.0 1570.6 1336.0 1606.6 1733.8 1417.6 True False 1285.8034366791585 1733.9701963928887 1405.2048871495217 1227.722024852165 1272.5672337586657 1488.7763536549646 1630.3700424652966 1309.352431928275 1539.080189101997 1624.3275721078408 1243.244186906798 1.034232414050733 1.3947140993331497 1.1302726382704298 0.9875147921718804 1.0235859110870438 1.1974931146543728 1.3113836039898734 1.0531739828086026 1.2379548646281961 1.3065233597827484 1.0 10.279893970143931 -10.995041300547967 1.2549262493328976 0.9994860132752462 1.1619822930554364 0.0 0.1512235184186926 0.6290291381923563 1.7536565897891132 0.08765416343606738 0.01975519986021713 1.0114832596246053e-11 10.995041300547967 0.1624962797801902 GSLLPTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GSLLPTSPR 9 0 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128 H7C179 BRD8 Bromodomain-containing protein 8 1 GSLLPT(0.005)S(0.995)PR;GSLLPT(0.09)S(0.91)PR 72.607 0.0025738000000000002 107912000.0 1867.26 2176.29 1866.44 1648.79 2063.79 1765.46 1790.5 1754.71 2811.3999999999996 2537.8 2711.3999999999996 True False 2182.407837876048 2287.053865313842 2131.1292574479435 2052.743624016996 1760.2092248860818 1952.279805382497 2115.8106733925997 2003.4455160739997 2174.6223888832665 1964.5092174213542 2038.0845491669013 1.070813199956862 1.1221584827031394 1.0456530168579492 1.007192574447457 0.8636585884553193 0.9578993208012502 1.0381368497481962 0.9830041235987679 1.0669932166318503 0.9638997647199562 1.0 10.992998187065542 -5.974107443416212 4.200954434059999 1.010974170341359 1.0958822541473792 0.32376615218851723 0.054701084891504693 0.2238235092739539 9.09911348851914 0.008399129806026813 0.027093928369149454 1.0614329287450726e-06 5.974107443416212 0.08490808380602011 GSLLPTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GSLLPTSPR 9 0 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128 H7C179 BRD8 Bromodomain-containing protein 8 1 GSLLPT(0.023)S(0.977)PR 72.928 0.0024283 69595000.0 1494.6 1477.5 1564.0 1462.8 1427.0 1584.4 1494.5 1673.0 1616.6 1435.8 1366.2 True False 1646.3306917336333 1602.0141102867015 1670.142445096021 1553.1538337401598 1326.7724428827469 1571.4971717061455 1551.3740153217793 1639.6307025568904 1548.6599238779343 1345.1433429648387 1198.1660610553524 1.3740421676470578 1.3370551565078024 1.3939156677705833 1.2962759372203647 1.107336024619256 1.311585449450939 1.2947904850145056 1.3684502973758854 1.2925252802719722 1.1226685404358956 1.0 10.226612158446692 -10.578437816246359 0.6229864209364304 0.9692591211734585 1.3113782239899665 0.5662634032533234 0.08054113441240769 0.43929497960734676 0.26648579357368407 0.08140637256083791 0.016440653448006246 2.6397462631109455e-11 10.578437816246359 0.34211910281650804 GSLPQLVS(ph)PIVSR ddPTM_A549_MK2206_60min_R1 2 GSLPQLVSPIVSR 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 GS(0.002)LPQLVS(0.997)PIVS(0.001)R;GSLPQLVS(1)PIVSR 73.91 0.0011875 30954000.0 3191.7 3740.0 3752.0 2616.8 4987.7 4049.9 4175.5 3369.0 5534.4 4909.4 5204.5 True False 3730.380930426929 3930.3500251684136 4284.090018401171 3257.9161174726173 4254.015937166237 4478.457729893952 4934.134301452551 3846.566067129787 4280.867236620739 3800.3631302736176 3912.0790131073045 0.9535545979333235 1.0046704097744172 1.0950929171030173 0.8327838232707127 1.0874054237946837 1.144776911429706 1.2612563000187063 0.9832536751537946 1.094269114268352 0.9714433470133435 1.0 11.933719793670768 -5.5110821567035275 4.2054013008367 1.0537344356032676 0.960850448231665 0.07642802814460803 0.10420417015842455 0.40540271946241135 16.51327487382507 0.013948002678375055 0.077074449831555 3.0826047501138548e-06 5.5110821567035275 -0.09288398737160264 GSLPQLVS(ph)PIVSR ddPTM_A549_PD325901_60min_R1 4 GSLPQLVSPIVSR 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 GSLPQLVS(1)PIVSR;GSLPQLVS(1)PIVSR;GSLPQLVS(1)PIVSR;GSLPQLVS(1)PIVSR 130.72 4.1658999999999996e-08 52230500.0 9483.8 9191.1 8249.0 9087.1 10665.300000000001 10093.4 7935.4 8341.9 10654.6 10575.3 11434.9 True False 10446.588394395445 9965.666253168261 8808.826745266671 9648.389528698526 9916.206121287574 10011.202696856108 8237.385989417497 8175.514260406048 10206.82421436956 9907.573753208007 10028.479791803433 1.0416921219638637 0.9937364844982277 0.8783810635452823 0.9620989151899607 0.9888045174496315 0.9982771970123082 0.821399270919422 0.815229668916333 1.0177837943804697 0.9879437321403145 1.0 13.291815305235309 GSLS(ph)NAGDPEIVK ddPTM_A549_PD325901_60min_R1 1 GSLSNAGDPEIVK 13 0 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 GS(0.018)LS(0.982)NAGDPEIVK 60.657 0.007991700000000001 3813800.0 3258.5 3804.5 3281.0 2964.9 4489.0 4450.2 3056.9 3693.2 3497.2 3332.1 3765.9 True False 3589.300521219085 4125.118566893913 3503.668390255783 3148.035139223546 4173.708126209285 4413.95904665911 3173.2320022998665 3619.536228740647 3350.224845840598 3121.710637340255 3302.7181740069886 1.0867716626467112 1.249007135806915 1.0608438884765616 0.9531649306317364 1.2637191265840213 1.336462517873246 0.9607940596548011 1.0959264575545913 1.014384113124606 0.9451943741093936 1.0 11.68943815216338 -7.819236695644559 24.999995318429765 1.0119318131424455 1.1534876682023323 0.34746092485377633 0.1053956663021817 74.75959917982075 32336.56604816051 0.01622114256316129 0.022412736023121282 1.5162237822825245e-08 7.819236695644559 0.14155585505988677 GSLS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 GSLSPAR 7 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 GSLS(1)PAR;GSLS(1)PAR 119.86 0.006702199999999999 591650000.0 8728.4 8932.6 8248.5 7360.400000000001 11363.3 7698.700000000001 7811.3 7989.9 11705.7 12441.9 12687.6 True False 10201.540531108307 9387.231185780585 9418.261331764947 9163.698330420908 9691.773622872492 8513.371324016543 9230.51209889506 9122.492793042524 9054.377640161787 9631.266148725164 9536.918760053846 1.0696893606599946 0.9843044092081146 0.9875580959349359 0.9608657220405188 1.0162374102909701 0.8926752484959278 0.9678715244548171 0.956545087838309 0.9494028278909933 1.0098928585893485 1.0 13.219307512358593 GSLS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 GSLSPAR 7 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 GS(0.005)LS(0.995)PAR 55.503 0.039876999999999996 345660000.0 4333.9 4538.6 4056.2 4592.9 5565.8 4241.5 4641.7 4359.9 4682.4 4752.6 5098.3 True False 4773.874337551444 4921.083750218083 4331.478123912069 4876.593001767281 5174.877408967619 4206.958630264841 4818.342433535703 4272.938374224618 4485.615011484617 4452.520024916211 4471.24142078649 1.0676843158944704 1.1006079267695783 0.9687417243397614 1.0906575026560497 1.157369267718351 0.940892748646267 1.0776296737491213 0.9556492195567935 1.003214675600227 0.9958129311060582 1.0 12.126459729707992 -7.2738756474781905 24.910609004336603 1.000284543010101 1.073066079768622 0.36883673851141163 0.05275863507078046 634.6616861842025 1271265.0225812176 0.007362957063963099 0.011823627743137359 5.322606408436681e-08 7.2738756474781905 0.07278153675852095 GSLS(ph)PGGER ddPTM_A549_MK2206_60min_R1 2 GSLSPGGER 9 0 E7EWN3;Q9C0A6;H0Y3R4;Q9C0A6-2;Q9C0A6-3;H7C1F2 E7EWN3 SETD5 SET domain-containing protein 5 1 GS(0.001)LS(0.999)PGGER;GS(0.003)LS(0.997)PGGER 97.47200000000001 0.00086194 14448200.0 2752.3 2969.8 2986.8 2585.44 3862.6000000000004 2685.8 2647.4 2769.7 3586.1 3813.7 4391.4 True False 3216.820952725516 3120.9501349585976 3410.373152175006 3218.8729160648104 3294.4166567552816 2970.009573310249 3128.39831149934 3162.313456850511 2773.8540758249537 2952.182521270318 3300.894183525681 0.9745301648202589 0.9454862717305026 1.0331664581057216 0.9751518034506444 0.9980376448288685 0.8997590980447563 0.9477426835167134 0.958017216254066 0.8403341402668666 0.8943584244548838 1.0 11.68864117561586 -7.253280805794619 24.4825478003872 0.9260069045231282 0.98516231054083 0.3394186005899279 0.04291650824556119 630.6500067600929 1892474.1138969813 0.008814371135502323 0.015095813716860768 5.581092162177732e-08 7.253280805794619 0.05915540601770186 GSLS(ph)PGGER ddPTM_A549_PD325901_60min_R1 2 GSLSPGGER 9 0 E7EWN3;Q9C0A6;H0Y3R4;Q9C0A6-2;Q9C0A6-3;H7C1F2 E7EWN3 SETD5 SET domain-containing protein 5 1 GS(0.011)LS(0.989)PGGER;GS(0.003)LS(0.997)PGGER 80.986 0.0016291 9358100.0 4564.8 3816.7 3704.9 4286.5 4694.9 4373.8 3797.5 4066.7 4199.6 4657.3 5271.7 True False 5028.215135571853 4138.346703709816 3956.336793373558 4551.2673696521715 4365.146420525726 4338.181222928768 3942.0159405717354 3985.586478235568 4023.1054165023957 4363.237283180211 4623.314320059652 1.0875780419590804 0.8951039053854382 0.8557360628084035 0.9844166012907919 0.9441595613748807 0.9383271226241858 0.852638533241857 0.8620626248453175 0.8701777854572708 0.9437466244181111 1.0 12.174711733451874 -7.535103731222468 24.749573076648584 0.9230507004044377 0.9459363068525414 0.07348103664179984 0.06747980696881814 890.8047871122013 1803432.5366609269 0.011841653071482381 0.017570823990284985 2.9167302698684807e-08 7.535103731222468 0.022885606448103668 GSLS(ph)PRSPVSSLQIR ddPTM_A549_PD325901_60min_R1 1 GSLSPRSPVSSLQIR 15 1 Q5JT35;P55197-1;P55197 Q5JT35 MLLT10 Protein AF-10 1 GS(0.037)LS(0.579)PRS(0.382)PVS(0.002)S(0.001)LQIR 70.334 0.00053249 4767000.0 1024.3 960.1 1004.2 1092.1 1051.5 1172.5 1292.8 1096.1 1195.0 1125.3 1282.1 True False 1128.2861819501945 1041.010996471243 1072.3510507451563 1159.5565366609442 977.6462674780721 1162.9515487411363 1341.9982114473044 1074.2374256261846 1144.778305724441 1054.2483659551008 1124.4098279015273 1.003447456570085 0.9258287953726531 0.9537012432081569 1.0312579167197522 0.8694750287825586 1.0342772891904894 1.193513413122562 0.9553789009751198 1.0181148166064389 0.9376015219669789 1.0 10.134952253420792 GSLS(ph)PVTKPR ddPTM_A549_MK2206_60min_R1 2 GSLSPVTKPR 10 1 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8;F5H4Q7 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 GS(0.011)LS(0.989)PVTKPR;GS(0.029)LS(0.971)PVTKPR 92.792 0.00017083 40024000.0 6172.2 7910.5 6060.0 5819.9 9172.7 6826.4 6140.7 6562.9 9470.1 9916.1 9733.099999999999 True False 7213.916464198101 8313.110661522653 6919.399123537076 7245.7757612652385 7823.407981002215 7548.765117002411 7256.385703491727 7493.2111730383085 7325.137470642177 7676.04612296945 7316.10265010562 0.9860327020006965 1.1362758368901014 0.9457766593033222 0.9903873835286652 1.0693409257850244 1.031801421880464 0.9918376013200101 1.024208042369407 1.0012349226041033 1.0491988002462804 1.0 12.836859601924687 -6.918395006792061 0.2560481932030887 0.9958309681462071 1.046254287549223 0.0 0.049699559620163335 9.27275771237674 0.9727459984719483 0.03432912508551561 0.14583133512014063 1.2067157834702023e-07 6.918395006792061 0.05042331940301581 GSLS(ph)PVTKPR ddPTM_A549_PD325901_60min_R1 2 GSLSPVTKPR 10 1 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8;F5H4Q7 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 GSLS(1)PVTKPR;GSLS(0.999)PVTKPR 111.79 4.2139e-05 59841000.0 8939.8 10293.0 10332.7 10946.4 13258.6 12028.7 11542.7 11949.3 11786.400000000001 12449.3 13043.1 True False 9847.361914867073 11160.427233286646 11033.939157572671 11622.534266921852 12327.361675686896 11930.742255302768 11981.963764907792 11710.961837455496 11291.058596310078 11663.24907338917 11438.881387023172 0.8608675605324839 0.9756572216884408 0.9645994904790353 1.01605514330335 1.0776719557273895 1.0429990356257726 1.0474768781587962 1.0237855819312005 0.9870771637792494 1.0196144779174414 1.0 13.481658356814378 -4.9003916606574025 1.2293877481641757 1.0092914129284594 0.6666076305298436 0.7065312929151062 0.02953286758067734 1.6162841877367806 1.1277709120300994 0.005042294249444222 0.8696026192203482 1.257790584371967e-05 4.9003916606574025 -0.34268378239861574 GSLSLS(ph)FEREPSTSDLGTTDVQK ddPTM_A549_MK2206_60min_R1 1 GSLSLSFEREPSTSDLGTTDVQK 23 1 P57078-2;P57078 P57078-2 RIPK4 Receptor-interacting serine/threonine-protein kinase 4 1 GS(0.02)LS(0.135)LS(0.845)FEREPSTSDLGTTDVQK 104.3 1.0036e-10 4179700.0 1817.7 1852.6 1560.3 1731.9 2798.2 1530.7 1637.7 1719.2 3209.4 2576.5 2729.4 True False 2124.4833215017156 1946.8894269056148 1781.5740020552628 2156.215577747945 2386.5884867531267 1692.6776580035742 1935.248891267836 1962.9018648291856 2482.476024358665 1994.4668605430368 2051.6146523921743 1.0355177172402121 0.9489547292107461 0.8683765247913173 1.0509846842991721 1.1632732706263207 0.8250465827147018 0.9432808880611881 0.9567595272048043 1.2100108670330016 0.9721449679731505 1.0 11.002544064686193 -8.727572076365764 24.990418529636983 1.0991718382764553 0.9725499009061932 0.09120700427805906 0.10401950595748176 210.91990537658634 155636.0032878612 0.01890554955936618 0.021436359035062566 1.8725262890851417e-09 8.727572076365764 -0.12662193737026206 GSLSLS(ph)FEREPSTSDLGTTDVQK ddPTM_A549_PD325901_60min_R1 1 GSLSLSFEREPSTSDLGTTDVQK 23 1 P57078-2;P57078 P57078-2 RIPK4 Receptor-interacting serine/threonine-protein kinase 4 1 GS(0.039)LS(0.162)LS(0.799)FEREPSTSDLGTTDVQK 78.429 2.2241e-05 3790600.0 2595.0 2871.5 2732.6 2703.6 3405.8 3383.6 2691.8 3318.6 3209.3 3463.0 3382.7 True False 2858.4424896619685 3113.4913825301273 2918.0506684586862 2870.5952316789035 3166.5883573721508 3356.0450834290045 2794.23792200948 3252.4079196086627 3074.4242816413785 3244.345589000722 2966.64934470205 0.963525566230697 1.0494976051316323 0.9836183280878299 0.9676220200426844 1.0673955663237245 1.1312577569783742 0.9418834507689733 1.0963236775579597 1.0363288425481754 1.0936060221591717 1.0 11.534618696294547 -5.243804962615002 21.73585906643414 1.0242939853627786 0.9635252544245333 0.0838120818185576 0.05746098065469841 1005.0150197280907 1238636.4941507138 0.006890996880934477 0.23084568836696454 5.704203849582598e-06 5.243804962615002 -0.06076873093824531 GSLSNAGDPEIVKS(ph)PSDPK ddPTM_A549_PD325901_60min_R1 2 GSLSNAGDPEIVKSPSDPK 19 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 GS(0.001)LS(0.001)NAGDPEIVKS(0.949)PS(0.049)DPK;GSLSNAGDPEIVKS(0.935)PS(0.064)DPK 76.21 0.00011788 10409500.0 7272.3 7253.1 6976.5 7948.3 9142.4 7789.2 7968.9 7194.700000000001 9134.7 8738.0 10620.3 True False 8010.578542415695 7864.344191756663 7449.967243102551 8439.248439100977 8500.269363567784 7725.7673377010315 8272.160850249396 7051.196064367034 8750.800325774933 8186.2811887635935 9314.070427628576 0.8600513174834604 0.8443509476188251 0.7998615966015797 0.906075222930182 0.9126267006048406 0.8294727206253327 0.8881359567253716 0.7570477504068341 0.9395248182596087 0.8789155345530144 1.0 13.18519607568938 -8.953864278293818 7.14907456341323 0.9736739984013233 0.851953780641078 0.3358667803676054 0.05220764472369563 0.10090007887151398 11.950692042257286 0.00792970369797665 0.00833104376638846 1.112079209721177e-09 8.953864278293818 -0.12172021776024533 GSLSPRS(ph)PVSSLQIR ddPTM_A549_PD325901_60min_R1 1 GSLSPRSPVSSLQIR 15 1 Q5JT35;P55197-1;P55197 Q5JT35 MLLT10 Protein AF-10 1 GS(0.105)LS(0.251)PRS(0.613)PVS(0.015)S(0.016)LQIR 45.357 0.012323 6110300.0 1007.0 1313.2 1019.2 1278.7 1380.8 1275.7 1390.4 1551.6 1195.5 1589.0 1598.5 True False 1109.2298986857804 1423.8679726758003 1088.3690409474834 1357.6823948615963 1283.817371501399 1265.3111221569868 1443.3124328560748 1520.6521207933467 1145.2572924632377 1488.670268819564 1401.8946337263803 0.7912362826707833 1.015674030287863 0.7763558078929844 0.9684625093775676 0.9157730835226041 0.9025721988775002 1.029544159834325 1.0847121347139312 0.8169353565603042 1.061898828204032 1.0 10.453162205256795 GSLTLTISGES(ph)PK ddPTM_A549_PD325901_60min_R1 2 GSLTLTISGESPK 13 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 GSLTLT(0.056)IS(0.04)GES(0.904)PK;GSLTLTIS(0.017)GES(0.983)PK 117.7 1.4850999999999999e-05 3977100.0 5269.5 5735.9 5510.8 5028.7 6287.8 6827.9 6339.5 6010.7 5749.9 6741.9 5652.6 True False 5804.455760799131 6219.284423142799 5884.796027132446 5339.311377993675 5846.166619732401 6772.295846183031 6580.75314160751 5890.811873197069 5508.251698815868 6316.21528342015 4957.366034783692 1.1708749606286437 1.2545542087279358 1.1870812011542782 1.0770460241446844 1.179288876131474 1.3661076867563868 1.3274696876190326 1.1882947177722587 1.1111246698684039 1.2741071042771506 1.0 12.275358071021481 -9.165228042031464 1.275143519128717 1.0319995825495019 1.2213280364706907 0.0 0.10551381763182625 0.24255645331974332 0.8157839205086026 0.019253130223047327 0.017298199942037486 6.835526289916002e-10 9.165228042031464 0.1893284539211888 GSLVGLVDYPDDEEEDEEEES(ph)SPRK ddPTM_A549_MK2206_60min_R1 1 GSLVGLVDYPDDEEEDEEEESSPRK 25 1 Q5MIZ7-5;Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7 Q5MIZ7-5 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B 1 GSLVGLVDYPDDEEEDEEEES(0.5)S(0.5)PRK 81.97 1.1226999999999999e-06 4920900.0 2390.1 2884.3 2924.5 2410.0 3804.6 3500.0 2817.4 3167.5 4967.9 4135.5 4636.7 True False 2793.490447665318 3031.0985501586247 3339.2380753769285 3000.4501081890126 3244.9483799231434 3870.3676768880296 3329.285110983695 3616.5028250619152 3842.6785821061308 3201.2876777705133 3485.2794235900906 0.8015111869532171 0.8696859510438831 0.9580976643580764 0.8608922681723841 0.9310439667935179 1.1104899224697657 0.9552419494544544 1.0376507549390845 1.1025453385737127 0.9185167926860093 1.0 11.767058609871311 -7.070158364143746 4.832312605509146 1.0445694938179368 0.8798350438279158 0.5170835944404907 0.06500757381116094 0.10404861323834722 4.625967868155842 0.008538194782916167 0.015200551193801964 8.508277299210153e-08 7.070158364143746 -0.16473444999002107 GSLVGLVDYPDDEEEDEEEES(ph)SPRK ddPTM_A549_PD325901_60min_R1 2 GSLVGLVDYPDDEEEDEEEESSPRK 25 1 Q5MIZ7-5;Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7 Q5MIZ7-5 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B 1 GSLVGLVDYPDDEEEDEEEES(0.59)S(0.41)PRK;GSLVGLVDYPDDEEEDEEEES(0.5)S(0.5)PRK 169.36 4.3437999999999995e-48 14603500.0 3893.3999999999996 4100.3 3795.3 4322.700000000001 4466.1 5138.8 4418.1 4716.9 4288.5 4155.1 5156.3 True False 4288.655101830407 4445.846671004102 4052.8718809929173 4589.703361436008 4152.4165432085765 5096.951316563713 4586.233213177087 4622.817729163537 4108.269258660474 3892.7462768861988 4522.107788478781 0.9483752494261296 0.9831359354880984 0.8962351342704918 1.0149478022459888 0.918248024469455 1.1271184931835307 1.0141804281759232 1.0222705750051646 0.9084854786361649 0.8608256279967407 1.0 12.142779665086442 -5.243217842193767 20.7340259027764 0.9730335644525695 0.9483750314345416 0.010577200070143067 0.07141561720545692 1861.365029808017 2117635.336860182 0.008935115787452126 0.2889793780085265 5.7119205476105765e-06 5.243217842193767 -0.024658533018027895 GSLVGLVDYPDDEEEDEEEES(ph)SPRKRPR ddPTM_A549_MK2206_60min_R1 3 GSLVGLVDYPDDEEEDEEEESSPRKRPR 28 3 Q5MIZ7-5;Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7 Q5MIZ7-5 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B 1 GSLVGLVDYPDDEEEDEEEES(0.5)S(0.5)PRKRPR;GSLVGLVDYPDDEEEDEEEES(0.5)S(0.5)PRKRPR;GSLVGLVDYPDDEEEDEEEES(0.5)S(0.5)PRKRPR 173.33 8.2672e-58 34759800.0 2752.2799999999997 3411.17 2767.63 2379.55 4532.74 3641.77 3045.37 2480.71 4418.5 5322.299999999999 4720.1 True False 3216.7975772144705 3584.7839827149023 3160.1215505404157 2962.5398568220576 3865.9799504843686 4027.139684188723 3598.6743090922205 2832.3582393557517 3417.7168048946114 4119.988733502115 3547.9689018671875 0.9066588987072486 1.0103763820557559 0.8906846812770373 0.834996004407751 1.0896318590757157 1.1350549555463585 1.0142913899832515 0.7983041333494124 0.9632882641941906 1.1612245900278018 1.0 11.792777649059065 -6.751631049760409 24.997569197790625 0.9884362772437584 0.9163721026842828 0.16998091251131742 0.10242129581755102 354.6445585465132 903843.076687079 0.013171689868079388 0.02715946372018679 1.7716133744211124e-07 6.751631049760409 -0.07206417455947556 GSLVGLVDYPDDEEEDEEEES(ph)SPRKRPR ddPTM_A549_PD325901_60min_R1 3 GSLVGLVDYPDDEEEDEEEESSPRKRPR 28 3 Q5MIZ7-5;Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7 Q5MIZ7-5 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B 1 GSLVGLVDYPDDEEEDEEEES(0.5)S(0.5)PRKRPR;GSLVGLVDYPDDEEEDEEEES(0.5)S(0.5)PRKRPR;GSLVGLVDYPDDEEEDEEEES(0.5)S(0.5)PRKRPR 177.71 5.8499e-58 85877000.0 5599.650000000001 5389.099999999999 6789.280000000001 6522.3 7116.099999999999 6688.6 6900.8 7819.599999999999 7467.3 7689.7 8413.6 True False 6168.122345755549 5843.258370048091 7250.041368057235 6925.167657781958 6616.289685212272 6634.130259198265 7163.413720262652 7663.63194364247 7153.475349235245 7204.17102966759 7378.78053820474 0.8359270632618998 0.7919002794287954 0.982552785046128 0.9385246819479001 0.8966643811881168 0.8990822026551764 0.9708126814685714 1.0386041303116238 0.96946579617012 0.9763362648295226 1.0 12.849166692159983 -2.5978532724705805 0.27591756845358967 0.9955832679493655 6.961552035246281e-20 0.5765970654470576 0.04577796249271344 16.672229450909963 0.27890588087844975 0.017792100708403258 7.597958097453751 0.002524333481112869 2.5978532724705805 -0.9955832679493655 GSNNLKT(ph)PEGK ddPTM_A549_MK2206_60min_R1 2 GSNNLKTPEGK 11 1 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 GS(0.014)NNLKT(0.986)PEGK;GS(0.007)NNLKT(0.993)PEGK 72.175 0.00084058 52160000.0 10341.7 11231.5 11358.1 10663.3 15539.5 10949.8 10505.2 10532.7 16067.199999999999 14664.900000000001 16952.4 True False 12087.12612971024 11803.135376384775 12968.849370469718 13275.808978693733 13253.66013505118 12108.500568111021 12413.858858488647 12025.742480040928 12428.004854046092 11352.088904784618 12742.65121756178 0.9485566169347786 0.92626998690177 1.0177512629864807 1.0418404107613932 1.040102244718519 0.9502340102837642 0.9741974920713521 0.9437394365363452 0.9753076217701033 0.8908733913347087 1.0 13.637377853415224 -7.580595087814017 0.0018484411633006464 1.9646307111830168 2.2884763538747205e-05 0.0 0.04798791417015287 258846.56914571542 196.5192982979927 103969.30590061193 104898.12859423715 2.626666360728949e-08 7.580595087814017 -1.964607826419478 GSNNLKT(ph)PEGK ddPTM_A549_PD325901_60min_R1 2 GSNNLKTPEGK 11 1 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 GSNNLKT(1)PEGK;GSNNLKT(1)PEGK 95.06700000000001 0.00011318 83092000.0 22580.7 22143.4 21719.9 22207.0 27661.0 26742.0 24086.0 26801.0 26584.0 26952.0 29893.0 True False 24873.07604096726 24009.502030269054 23193.943026368943 23578.675954243736 25718.18678526957 26524.222018281835 25002.605910364913 26266.433030022225 25466.76692835024 25250.24612034291 26216.350507339797 0.9487619580766414 0.9158216748569603 0.8847128825148767 0.8993881870644966 0.9809979759795034 1.0117434923238398 0.9537027628374486 1.0019103544815822 0.9714077831397739 0.9631487843158639 1.0 14.678179246214583 -6.7838923901766295 9.035179120556942 0.986534110563436 0.9104598724925065 0.7101477966833045 0.021779180336266798 0.08704020947223506 31.69796081057915 0.0030194412576841027 0.005793436572349343 1.6447792173976764e-07 6.7838923901766295 -0.0760742380709295 GSNPLDGRDS(ph)PSAGGPVGQLEPIPIPAPASPGTRPTLK ddPTM_A549_MK2206_60min_R1 2 GSNPLDGRDSPSAGGPVGQLEPIPIPAPASPGTRPTLK 38 2 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 GS(0.007)NPLDGRDS(0.775)PS(0.218)AGGPVGQLEPIPIPAPASPGTRPTLK;GS(0.002)NPLDGRDS(0.884)PS(0.114)AGGPVGQLEPIPIPAPASPGTRPTLK 86.194 1.5e-07 11196700.0 715.55 901.56 1178.55 1056.8200000000002 1577.1599999999999 1021.03 897.1800000000001 1065.63 1703.19 1307.83 1703.18 True False 836.3173464821219 947.4455531258915 1345.686111723534 1315.7409474424533 1345.1618532512186 1129.074716895139 1060.1859927139747 1216.686315855006 1317.4201844355443 1012.3902946726174 1280.2334006233252 0.6532538098716472 0.740056893270083 1.0511256080870417 1.0277352135960833 1.0507161058259227 0.8819288079387795 0.8281193040251777 0.9503628910655048 1.029046878322432 0.7907857224938052 1.0 10.322191138032306 -5.664585277726797 4.769781416258586 0.9937337232725427 0.6753987567335288 0.5178687611033237 0.09220714447576853 0.07996561185871205 3.005054841025728 0.01037704594773821 0.04309038923751358 2.1647847621187125e-06 5.664585277726797 -0.31833496653901394 GSNPLDGRDS(ph)PSAGGPVGQLEPIPIPAPASPGTRPTLK ddPTM_A549_PD325901_60min_R1 2 GSNPLDGRDSPSAGGPVGQLEPIPIPAPASPGTRPTLK 38 2 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 GS(0.02)NPLDGRDS(0.773)PS(0.207)AGGPVGQLEPIPIPAPASPGTRPTLK;GS(0.001)NPLDGRDS(0.977)PS(0.022)AGGPVGQLEPIPIPAPASPGTRPTLK 106.24 8.079200000000001e-15 34909000.0 2064.3 1502.74 1831.57 2043.26 2066.38 2404.8 1906.62 2403.0 2240.0 2285.1 1863.05 True False 2273.8662163426593 1629.3811736664888 1955.8713543251386 2169.4675296198534 1921.2445974240034 2385.216106108899 1979.1774674424958 2355.070279882969 2145.8605898098313 2140.818396022395 1633.9066608470011 1.3916744884092151 0.9972302657863171 1.1970520723082394 1.327779353378254 1.1758594560279527 1.459823968691349 1.211316114236605 1.4413738167039014 1.313331196469594 1.3102452222776397 1.0 10.674109854572002 -10.688858442214372 0.9841238967085244 1.002295974338773 1.2751492023958326 0.0 0.1552144027704529 0.43535851202867715 0.7596578879335311 0.081134448440907 0.022089026138047817 2.0471117817160977e-11 10.688858442214372 0.2728532280570597 GSNRSS(ph)LMDTADGVPVSSR ddPTM_A549_MK2206_60min_R1 1 GSNRSSLMDTADGVPVSSR 19 1 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 GS(0.214)NRS(0.146)S(0.64)LMDTADGVPVSSR 110.26 3.9174000000000003e-16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GSPATS(ph)PHLGR ddPTM_A549_MK2206_60min_R1 2 GSPATSPHLGR 11 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 GS(0.012)PAT(0.313)S(0.676)PHLGR;GS(0.001)PAT(0.229)S(0.77)PHLGR 75.89 0.00039326 31272000.0 3903.8 3772.3999999999996 3461.8 3049.5 4358.6 3150.3999999999996 3256.9 3316.7000000000003 4381.7 4811.2 6541.5 True False 4562.6660012534485 3964.399046776825 3952.7352946964784 3796.627636897255 3717.455713802505 3483.7732369337286 3848.636572003552 3786.8523819677553 3389.2519461370885 3724.3465784764803 4917.0650137845 0.9279246844331875 0.8062531277628074 0.8038810313907546 0.7721328935561741 0.7560314340731698 0.7085066451566776 0.7827101250876863 0.7701448671822914 0.6892835332938775 0.7574328523287057 1.0 12.263581715363507 -10.91183139201856 1.1451911486656712 1.0009713433821452 0.7707821943573064 0.0 0.0913281411132052 0.2460775540145897 0.5692725737870958 0.0450910787676501 0.010515869106598017 1.2250917294882149e-11 10.91183139201856 -0.23018914902483878 GSPATS(ph)PHLGR ddPTM_A549_PD325901_60min_R1 2 GSPATSPHLGR 11 0 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 GS(0.005)PAT(0.109)S(0.886)PHLGR;GS(0.01)PAT(0.441)S(0.549)PHLGR 76.07300000000001 0.00038826 44067000.0 5330.299999999999 5688.1 5367.6 5655.299999999999 6459.7 5904.3 5940.700000000001 5174.5 5896.9 6728.3 6738.8 True False 5871.428132040538 6167.456149388687 5731.877614000897 6004.615036881818 6005.992956755206 5856.2173383644285 6166.77658937578 5071.290538183276 5649.073800022136 6303.473989741142 5909.970320772804 0.9934784463135465 1.043568040893683 0.9698657189282434 1.0160144147892503 1.0162475665309003 0.9909046950338413 1.0434530555424844 0.8580906946957628 0.955854850940004 1.0665830194756176 1.0 12.52893517002574 GSPHSEGGKRS(ph)PEPNK ddPTM_A549_MK2206_60min_R1 2 GSPHSEGGKRSPEPNK 16 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GSPHS(0.025)EGGKRS(0.975)PEPNK;GSPHS(0.009)EGGKRS(0.991)PEPNK 93.92 1.8550999999999998e-06 20818300.0 1822.17 2030.8000000000002 2216.31 1991.1999999999998 2683.3 2129.34 2055.91 1719.3600000000001 2909.5 3067.6000000000004 3377.7 True False 2129.707748220708 2134.159045751876 2530.6160844037045 2479.044089388365 2288.5901245460154 2354.665345458502 2429.4422348699136 1963.0845453191657 2250.5028955167745 2374.6270294592723 2538.9238702224106 0.8388230041864724 0.8405762263225809 0.9967278318518552 0.9764152909284357 0.9014016337345059 0.9274265262834496 0.956878724629539 0.7731955133996196 0.8864003060161192 0.9352887880215385 1.0 11.31000142100267 -10.695574271462373 1.0620791676607053 0.9976047087593867 0.9020947215074393 0.11398193334796525 0.06494003494181946 0.5775065261906204 1.2011559111335612 0.03869176278530601 0.011232855854165832 2.0156992236382063e-11 10.695574271462373 -0.09550998725194737 GSPHSEGGKRS(ph)PEPNK ddPTM_A549_PD325901_60min_R1 2 GSPHSEGGKRSPEPNK 16 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 GS(0.012)PHS(0.29)EGGKRS(0.698)PEPNK;GS(0.021)PHS(0.359)EGGKRS(0.62)PEPNK 49.655 0.0057317 39620000.0 2453.7 2460.2 2015.67 2499.6000000000004 3246.7 2254.35 2533.6 2727.2 2369.12 2789.3 3566.2 True False 2702.79781768153 2667.529688072652 2152.465487408373 2653.994614996517 3018.6629925069496 2235.9913210273603 2630.0175344391187 2672.803856552988 2269.5541252367243 2613.1831219750848 3127.5800080043905 0.8641818309249584 0.8529053393504449 0.6882207591491138 0.8485776888853906 0.9651753063970576 0.7149269771851737 0.8409113524540174 0.8545916810161538 0.7256582147949125 0.8355287843275587 1.0 11.610831075743752 -10.974646236775126 1.2275850882148782 1.0006077664029338 0.8094475322315112 0.056156095689898544 0.0897419179953063 0.3455478179037316 0.9213149549055152 0.0556130419525007 0.012652620163068128 1.0601169129236496e-11 10.974646236775126 -0.19116023417142258 GSPHYFSPFRPY ddPTM_A549_MK2206_60min_R1 2 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 0 ; 77.541 0.001075 13560300.0 1929.26 2276.39 2704.3999999999996 2353.3999999999996 2796.5 2247.7 2544.6000000000004 2517.32 3875.4 3040.3 3425.3 False True 2254.8719221215833 2392.248527752173 3087.924585758029 2929.9831056481416 2385.1385545011485 2485.550122097492 3006.920882164094 2874.1578189691763 2997.6280877421245 2353.494118419945 2574.7034765292433 0.8757792664968163 0.9291355488349191 1.1993321226724791 1.1379885615402294 0.926374076177645 0.96537335066175 1.1678707507776738 1.1163063417475958 1.1642614829506475 0.9140835594755583 1.0 11.330190574210816 -7.746555327683634 24.998356258235134 1.089216923877754 1.0133990581785157 0.07064492874211414 0.1116798740101404 465.11752411760875 781181.0572534545 0.017160802806982633 0.02539588417978809 1.792440186855357e-08 7.746555327683634 -0.07581786569923832 GSPHYFSPFRPY ddPTM_A549_PD325901_60min_R1 3 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 0 ;; 67.385 0.0048384 8168000.0 2097.8900000000003 2292.52 2446.07 2066.86 2806.17 2806.8 1803.37 2381.07 2597.95 2251.24 2604.1800000000003 False True 2310.8662484150095 2485.718705999638 2612.0750196138256 2194.525248020364 2609.074299960951 2783.9423513915726 1871.9982321919279 2333.5776909367196 2488.767196114486 2109.0963222009773 2283.8823692571564 1.0118149163551842 1.0883742260369258 1.1436994543915218 0.9608749021229774 1.142385586526317 1.2189517239878966 0.8196561510305823 1.0217591423921395 1.0897090102429265 0.9234697682293379 1.0 11.157272631658993 GSPRYS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GSPRYSPR 8 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 GS(0.028)PRY(0.084)S(0.888)PR 50.284 0.008816500000000001 9554300.0 1141.4 1189.9 1181.3 1119.9 1260.5 1132.1 1113.2 989.64 1356.4 1127.7 1297.9 True False 1257.2740877457297 1290.1770489544137 1261.4701217339702 1189.073679522563 1171.9668284889297 1122.8805529465583 1155.5634351664137 969.900853842439 1299.3952250080595 1056.496829545514 1138.2665280659794 1.1045515762305294 1.133457777368315 1.1082379132041467 1.0446355490597705 1.029606686652036 0.9864829767545187 1.0151958321482257 0.8520858954628058 1.1415562111062447 0.9281629596370546 1.0 10.152622692655882 -6.2395023135835075 3.913096377296319 1.0393415869211577 1.1192427026746459 0.20905891376583274 0.0758728767565726 0.3300847057531735 11.465555714707227 0.011380282669162547 0.030721765020917148 5.760997495399054e-07 6.2395023135835075 0.07990111575348813 GSPS(ph)PPQAEAR ddPTM_A549_PD325901_60min_R1 1 GSPSPPQAEAR 11 0 M0R1G0;M0QZE8;M0R0K4;M0QYB1;M0R0E3;M0R0S2;M0R0S1;M0R2P6;Q8TBC3;M0QZF4 M0R1G0 SHKBP1 SH3KBP1-binding protein 1 1 GS(0.034)PS(0.966)PPQAEAR 97.779 2.8137e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GSPTDAEGS(ph)PGLSR ddPTM_A549_MK2206_60min_R1 2 GSPTDAEGSPGLSR 14 0 Q8TER5;Q8TER5-4;Q8TER5-3;G3V485;G3V3N2;G3V5C1 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GSPTDAEGS(0.999)PGLS(0.001)R;GSPTDAEGS(1)PGLSR 116.79 3.5123000000000002e-06 21540000.0 2996.3999999999996 3423.9 3055.7 3577.6 4313.6 3715.4 4166.6 4134.0 5254.1 6080.0 5844.3 True False 3502.119065053498 3598.161885340676 3489.0442082165414 4454.112160604564 3679.075154191369 4108.561161917085 4923.617286656018 4720.00715984403 4064.054739073618 4706.523777256608 4392.999015525605 0.7972046095791087 0.819067309740831 0.7942283155278812 1.0139114861767498 0.8374859956009306 0.9352520106188806 1.1207872501803708 1.0744384743002953 0.9251207944073191 1.0713691855206326 1.0 12.10099046078375 -6.304291702560856 0.9925061185449532 0.9808894356927992 0.782608261392152 0.5188541671448703 0.07933062723802352 0.4714095453191627 0.7751226471097994 0.01236388803873022 0.0669034308966234 4.962588872929623e-07 6.304291702560856 -0.19828117430064718 GSPTDAEGS(ph)PGLSR ddPTM_A549_PD325901_60min_R1 2 GSPTDAEGSPGLSR 14 0 Q8TER5;Q8TER5-4;Q8TER5-3;G3V485;G3V3N2;G3V5C1 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 GSPTDAEGS(1)PGLSR;GSPTDAEGS(1)PGLSR 171.26 1.4053e-22 32622000.0 5561.700000000001 5594.2 5144.8 5361.8 6251.8 6476.700000000001 5282.700000000001 5912.6 6135.9 5711.2 5779.200000000001 True False 6126.319689692857 6065.642866846606 5493.957066195657 5692.986208468687 5812.695135539144 6423.955902543045 5483.736039304362 5794.668554655031 5878.0294611670215 5350.593857320511 5068.395037367216 1.208729715131909 1.196758110235506 1.0839638634500557 1.1232325354469441 1.1468512404192068 1.267453672253609 1.0819472434320936 1.1432945758831534 1.1597417758147697 1.0556781422664883 1.0 12.30731325906977 -10.804601736560121 0.5633977284048045 0.9688861098063978 1.1594915793610585 0.4521884403832426 0.05358797800278978 0.7939446683908955 0.3336836812785811 0.08059863788166825 0.011283447472463147 1.568188495380277e-11 10.804601736560121 0.19060546955466073 GSPVSSPQNS(ph)PGTQR ddPTM_A549_MK2206_60min_R1 1 GSPVSSPQNSPGTQR 15 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 GSPVSS(0.001)PQNS(0.987)PGT(0.012)QR 94.09 2.295e-05 1346700.0 417.38 436.55 389.64 391.52 590.43 508.09 340.78 452.5 722.58 923.94 845.27 True False 487.8235400387225 458.7685303441902 444.8968109727699 487.44241757600076 503.57852913789134 561.8557465571544 402.6953148722314 516.6432607231309 558.9167837231523 715.221312295802 635.366130734789 0.7677833558338462 0.7220538019765597 0.7002211629667058 0.7671835088412453 0.7925800649076341 0.8843023248774353 0.6338004111212567 0.8131425893376512 0.87967670400809 1.1256837242310382 1.0 9.311444376578887 -9.280231358931637 0.554121405693702 0.9947845485890777 0.7440658676931898 0.6888651522261688 0.07484795248764194 0.2986136796084307 0.21002496459478032 0.028212611004603302 0.01845574757660972 5.245279573715132e-10 9.280231358931637 -0.2507186808958879 GSQITQQS(ph)TNQSR ddPTM_A549_PD325901_60min_R1 1 GSQITQQSTNQSR 13 0 P50750;P50750-2 P50750 CDK9 Cyclin-dependent kinase 9 1 GSQIT(0.001)QQS(0.952)T(0.021)NQS(0.027)R 57.136 0.0080664 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GSQPPPAAES(ph)QSSLRR ddPTM_A549_PD325901_60min_R1 1 GSQPPPAAESQSSLRR 16 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 GSQPPPAAES(0.529)QS(0.235)S(0.235)LRR 90.729 4.2857e-06 53866000.0 4630.6 4582.7 4057.5 3898.9 5136.3 3814.8 3920.1 4077.1 4786.3 4195.3 5188.7 True False 5100.695103132452 4968.9002119870465 4332.866349729604 4139.726197955639 4775.544007273062 3783.733533592911 4069.281550661032 3995.7790420769234 4585.148455806603 3930.4080420256228 4550.522793879304 1.1209030993083164 1.0919405169600473 0.9521689146481236 0.909725406391501 1.0494495299960749 0.8314942491184165 0.8942448450394387 0.8780923034714735 1.0076091612976585 0.8637267013170951 1.0 12.151816585755807 -5.7049312787166855 5.479953783206251 0.9707532353082545 1.1114603016568214 0.38543367752433133 0.07263409273392823 0.1606530469275241 9.797016152210515 0.009844413708841402 0.03913821540271436 1.972734870282246e-06 5.7049312787166855 0.1407070663485669 GSQPPPAAESQSS(ph)LRR ddPTM_A549_MK2206_60min_R1 2 GSQPPPAAESQSSLRR 16 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 GSQPPPAAES(0.001)QS(0.067)S(0.932)LRR;GSQPPPAAES(0.001)QS(0.077)S(0.922)LRR 123.34 2.3832e-08 100926000.0 6017.1 5693.1 5366.0 5148.5 7239.0 7345.1 5371.3 7153.1 8297.9 8331.8 8050.0 True False 7032.639376029036 5982.854472803823 6126.979487937287 6409.88273112495 6174.152689445311 8122.35360671722 6347.195682766641 8167.073830450004 6418.438899023418 6449.640593313588 6050.962831302486 1.1622347669445594 0.988744211392883 1.0125627373286044 1.0593161633658896 1.0203587200214728 1.3423241611564918 1.0489563164942446 1.349714757492903 1.0607301809589587 1.0658866651681755 1.0 12.562949007450086 -4.2645817300447035 16.274183859441184 1.0715846445162032 1.0722893729509735 0.0 0.12712953775824218 0.0 0.0 0.016607739405199058 0.0 5.437737890933523e-05 4.2645817300447035 0.0007047284347703187 GSQPPPAAESQSS(ph)LRR ddPTM_A549_PD325901_60min_R1 1 GSQPPPAAESQSSLRR 16 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 GSQPPPAAESQS(0.062)S(0.938)LRR 107.09 3.1336e-07 57370000.0 4728.0 4270.0 4070.4 4556.8 5759.1 4680.5 4713.8 4777.3 4805.0 4555.9 5001.8 True False 5207.983079430357 4629.847885566302 4346.641821303607 4838.263186756331 5354.600683816416 4642.383559814828 4893.186238490333 4682.013003780653 4603.062559837606 4268.239696485243 4386.610309022589 1.187245438401111 1.0554500079579465 0.9908885255577016 1.1029617052612952 1.2206693338596362 1.0583077211728045 1.1154823186426648 1.0673419050127306 1.049343852215413 0.9730154711272448 1.0 12.098890832776236 -9.11813433237024 0.7836933361363005 1.0098943011153287 1.1017399031031851 0.3390834229332236 0.060398782098244945 0.5273538558112566 0.6929410942842185 0.01745843107400478 0.014531372097893921 7.618433265129269e-10 9.11813433237024 0.0918456019878564 GSQS(ph)PKR ddPTM_A549_PD325901_60min_R1 1 GSQSPKR 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 GS(0.132)QS(0.868)PKR 57.59 0.014556999999999999 148550000.0 1596.4 1772.7 1508.9 1320.9 1392.7 1323.5 1367.4 1452.1 1339.8 1508.2 1874.2 True False 1758.4653527924343 1922.0916502911923 1611.3030277528044 1402.488993018442 1294.8815565541706 1312.7218548050273 1419.437155269991 1423.136726349588 1283.4928652800045 1412.9719946089776 1643.6852815326758 1.0698309296489716 1.1693793647035111 0.9802989938866665 0.8532588377932501 0.7877916600596079 0.7986455007864782 0.8635699128159244 0.8658206910647551 0.7808629058740459 0.8596365803625335 1.0 10.682718375508095 -5.981216529732952 3.6538278684413283 0.8733501367340746 1.1179409840733965 0.7251879314812835 0.06316603690039176 0.1271196816160342 3.6644192208068604 0.012512829883498795 0.04126825887030343 1.044199474388788e-06 5.981216529732952 0.2445908473393219 GSQTGT(ph)SIGGDAR ddPTM_A549_MK2206_60min_R1 2 GSQTGTSIGGDAR 13 0 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 GS(0.008)QT(0.009)GT(0.492)S(0.492)IGGDAR;GS(0.011)QT(0.041)GT(0.474)S(0.474)IGGDAR 68.809 0.0038654 3079500.0 858.85 767.5 959.86 879.6800000000001 1308.0 812.37 944.9000000000001 988.0699999999999 1445.8400000000001 1534.06 1424.92 True False 1003.8028831334926 806.5624717424487 1095.9825813066493 1095.201639490336 1115.5949326971229 898.3344541924367 1116.5760990162905 1128.131948337468 1118.3595485320411 1187.5147805490592 1071.0730382086388 0.9371936808458413 0.7530415228184794 1.0232566241604508 1.022527503186946 1.0415675615950026 0.8387238051430125 1.0424836208030737 1.0532726603073306 1.0441487262180444 1.108715034536924 1.0 10.064841147820824 -5.780129261289358 24.99467057177696 1.0143124753035564 0.8451176093034347 0.4478575534626099 0.0744654505991675 122.48247871426547 163800.81029389077 0.008901443276115554 0.027744252858352247 1.6590930295939145e-06 5.780129261289358 -0.16919486600012168 GSQTGT(ph)SIGGDAR ddPTM_A549_PD325901_60min_R1 1 GSQTGTSIGGDAR 13 0 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 GSQT(0.001)GT(0.499)S(0.499)IGGDAR 68.03399999999999 0.0043032 2428500.0 426.56 544.73 681.28 431.72 516.52 783.36 521.31 636.28 605.44 526.57 701.61 True False 469.86405718312517 590.6363088301011 727.515757669448 458.38636389274114 480.2414170972645 776.9805758821806 541.1487373217781 623.5888962479964 579.9954622743143 493.32228033500184 615.3164178722337 0.7636137173259844 0.9598903778197948 1.1823441347220995 0.7449603985504608 0.780478796190651 1.2627333731301726 0.8794641612084271 1.0134442672671875 0.9425970857074488 0.8017375548679685 1.0 9.26518467681528 GSQTGTS(ph)IGGDAR ddPTM_A549_PD325901_60min_R1 1 GSQTGTSIGGDAR 13 0 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 GSQT(0.001)GT(0.141)S(0.858)IGGDAR 83.499 0.00044916 2530100.0 778.16 709.23 646.17 583.6 748.62 851.55 669.85 793.63 818.04 655.09 762.98 True False 857.1582303488848 768.9993011429019 690.0229819358669 619.647646548235 696.0395137987964 844.6152591305029 695.3415083059847 777.8004270593091 783.6606236107293 613.7275056016415 669.1382969287167 1.280988151900978 1.1492382137930799 1.0312113132711265 0.9260382336392353 1.0402027757095265 1.2622431909923693 1.039159634858053 1.162391138916038 1.171148964582747 0.9171908235092721 1.0 9.386160606431398 -10.978361187107744 1.2688820480642087 1.000448109715112 1.1176236099797268 0.23933918135780774 0.10347514699988769 0.7174893511064815 2.067725833527431 0.07171283749910264 0.01678226541054557 1.051087358652537e-11 10.978361187107744 0.11717550026461465 GSRPAS(ph)PAAK ddPTM_A549_MK2206_60min_R1 4 GSRPASPAAK 10 1 A0A590UJ53;Q9P2N6-8;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6 A0A590UJ53 KANSL3 KAT8 regulatory NSL complex subunit 3 1 GS(0.015)RPAS(0.985)PAAK;GS(0.222)RPAS(0.778)PAAK;GS(0.024)RPAS(0.976)PAAK;GS(0.01)RPAS(0.99)PAAK 60.157 0.0022716 114868100.0 6069.910000000001 6485.15 5502.42 6641.95 7314.429999999999 6165.94 6497.41 6168.33 8154.11 10140.199999999999 10858.93 True False 7094.362412948498 6815.216434684746 6282.745895269448 8269.228048168467 6238.4870363668315 6818.415678180278 7677.905293162699 7042.709667218364 6307.217104437977 7849.521777325244 8162.357989778323 0.8691559990180202 0.8349568155696435 0.7697219238775482 1.0130930373948284 0.7642996109922225 0.8353487664617189 0.9406479479064381 0.8628278343142891 0.7727199802234196 0.9616733041058917 1.0 12.994770271262986 -10.991687212754199 1.2574218066020881 1.0002853807162828 0.84495402550107 0.319165664092818 0.07196464236276887 0.37880357062825903 1.0625823457346786 0.05040121929321764 0.011443520516081366 1.0193252614222685e-11 10.991687212754199 -0.1553313552152128 GSRPAS(ph)PAAK ddPTM_A549_PD325901_60min_R1 4 GSRPASPAAK 10 1 A0A590UJ53;Q9P2N6-8;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6 A0A590UJ53 KANSL3 KAT8 regulatory NSL complex subunit 3 1 GSRPAS(1)PAAK;GS(0.064)RPAS(0.936)PAAK;GS(0.068)RPAS(0.932)PAAK;GS(0.123)RPAS(0.877)PAAK 99.941 0.00012911 202073200.0 17107.699999999997 17408.0 17427.199999999997 16761.2 19291.1 16557.3 15476.900000000001 16631.0 17031.7 19410.6 20618.7 True False 18844.46110997689 18875.03325338131 18609.914590266846 17796.501256552907 17936.159686682102 16422.462838355324 16065.881898784646 16299.281658232887 16315.916878332177 18185.011403366283 18082.73061270823 1.0421247494962587 1.0438154312886938 1.0291540027250154 0.9841711209282648 0.9918944251747509 0.9081848969653898 0.8884654780785056 0.9013728074220181 0.9022927580896235 1.0056562691138125 1.0 14.142324930309012 -6.580634560285717 1.4861979410223765 0.9409855655741526 1.041950881753163 0.5614960124223732 0.03824798153120414 0.28517280662654904 1.2387706115799801 0.006983834409321298 0.020697822025350136 2.6264276372214333e-07 6.580634560285717 0.1009653161790105 GSRPPLILQSQSLPCS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GSRPPLILQSQSLPCS(0.625)S(0.375)PR;GSRPPLILQSQS(0.022)LPCS(0.489)S(0.489)PR 147.87 2.1374000000000002e-21 39009000.0 3627.3999999999996 4329.8 3899.4 3794.1 5861.2 4578.4 3639.9 4159.7 7348.6 6322.299999999999 7729.799999999999 True False 4239.616438584652 4550.168325928928 4452.39355483836 4723.654670323623 4999.025244284688 5062.883249104043 4301.222714371247 4749.350213546982 5684.153833302824 4894.08803897195 5810.277328372918 0.7296754008421649 0.7831241210655147 0.7662962201642768 0.812982651836072 0.860376357574758 0.8713668837080842 0.7402783845389598 0.8174050815706875 0.9782930335434757 0.8423157385402231 1.0 12.50439131072212 -8.753800054693253 4.478133394492135 0.9906697120433693 0.798109199435697 0.4764771730851749 0.060937012684331195 0.059411881407819236 2.854958656852945 0.0074903109490429024 0.00822501498030199 1.7627874312342188e-09 8.753800054693253 -0.19256051260767226 GSRPPLILQSQSLPCS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GSRPPLILQSQSLPCS(0.65)S(0.35)PR 177.69 3.8720999999999994e-35 32316000.0 3043.3 3415.3 3608.1 4465.6 4069.7 4095.8 3987.2 4487.1 4326.4 4752.2 5329.7 True False 3352.2535756409525 3703.1193169963913 3852.9673632678723 4741.429969886562 3783.8583117028147 4062.4451627581598 4138.935077879556 4397.601270438149 4144.576453461271 4452.145280984476 4674.180687751947 0.7171852779301142 0.7922499287842917 0.8243086052201722 1.0143873946317121 0.8095233292152997 0.8691245448433869 0.8854888919303165 0.9408282572305054 0.886695814802703 0.952497470337575 1.0 12.190497789489966 -2.0000000000000004 0.12581659759642397 1.0155014259350081 0.21723250664768182 0.5354996555517926 0.05951231370590692 47.04204082372471 0.3878930052657076 0.18977657101788126 6.672341445513079 0.00999999999999999 2.0000000000000004 -0.7982689192873264 GSRPPLILQSQSLPCSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GSRPPLILQSQS(0.001)LPCS(0.435)S(0.564)PR 92.01 1.2073999999999999e-06 24968000.0 1412.7 1713.8 1772.9 1712.1 1979.3 2061.0 1744.3 2208.7 2242.0 2108.5 2640.1 True False 1556.116264025227 1858.2279405816225 1893.2196553137687 1817.8525285387798 1840.2807962143113 2044.2158993223713 1810.6802910175848 2164.64574580837 2147.7765367650163 1975.3689501611377 2315.3844369727976 0.6720768435585323 0.8025569797001507 0.8176696815795395 0.7851190927565765 0.7948057207382585 0.8828840112595038 0.7820214484057437 0.9348969057762573 0.9276112003124125 0.8531494462076431 1.0 11.177036037226554 -6.921023353614948 0.17736957493243813 1.0524811961673062 0.5882507036635674 0.49953336195500075 0.06137450032926714 2.291903552564568 0.13779937696335778 0.08492712582016061 0.27389703775763713 1.1994348033851285e-07 6.921023353614948 -0.4642304925037388 GSRSS(ph)PEPK ddPTM_A549_PD325901_60min_R1 1 GSRSSPEPK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GS(0.011)RS(0.175)S(0.814)PEPK 53.556999999999995 0.0060249 19941000.0 4259.2 4833.9 3900.3 3449.6 4573.5 4374.6 3222.1 4192.4 3694.2 5253.0 5537.2 True False 4691.59084854268 5241.269717573527 4164.997812409213 3662.6739573899786 4252.27313771846 4338.974707994008 3344.7187787007733 4108.779293125822 3538.9456209265527 4921.32468351741 4856.159503202824 0.9661113572254773 1.0793034524744722 0.8576731900305656 0.75423263073923 0.8756452779019969 0.8934992158170024 0.6887580147428852 0.8460964452291824 0.7287539914190384 1.013419077415313 1.0 12.245600093138005 -5.7765016684915915 22.850231760767056 0.8487252431652788 1.0227073097478372 0.3085667167069073 0.09915194307407635 73.32179573779462 111234.95544054593 0.015380060721347302 0.04817801313418894 1.6730092089461304e-06 5.7765016684915915 0.17398206658255844 GSS(ph)AGFDR ddPTM_A549_MK2206_60min_R1 1 GSSAGFDR 8 0 G3V4S5;G3V2S7;G3V3U4;G3V3I1;G3V295;G3V5Z7;P60900 G3V4S5 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 1 GS(0.149)S(0.851)AGFDR 63.816 0.0097137 2305000.0 810.05 971.31 753.28 664.53 981.55 636.29 857.61 782.2 993.16 1116.4 1077.4 True False 946.7666361789428 1020.7455301995537 860.10643098647 827.3398798318857 837.165295251423 703.6217854648816 1013.4266359163518 893.079245387034 768.2108457506241 864.2044646265266 809.8518452727086 1.1690615286060497 1.2604102048515171 1.0620540485362957 1.021594115838914 1.033726477426889 0.8688277856895477 1.2513728799063137 1.1027686738014402 0.9485819538905139 1.0671142748776665 1.0 9.66151419451248 -2.000000000064888 0.3128064795352204 0.9841766030758059 3.296307976118352 0.17466383371274774 0.10389376191562183 40.3753657397762 0.5046719888308608 0.03140709476400147 53.883109124342994 0.009999999998505897 2.000000000064888 2.312131373042546 GSS(ph)DDEEESR ddPTM_A549_PD325901_60min_R1 1 GSSDDEEESR 10 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 GS(0.095)S(0.905)DDEEESR 88.441 0.00070372 6269700.0 403.69 470.14 422.7 394.33 437.36 410.79 286.81 428.72 333.76 504.93 488.1 True False 444.67231161912923 509.76034775647366 451.38696390159055 418.68686851159254 406.64134241008975 407.4446624369904 297.7247114984539 420.16884327566635 319.7332278816646 473.04863362810687 428.0667943208296 1.0387918836933987 1.1908430051559102 1.0544778756263042 0.9780877051579783 0.9499483440551995 0.9518249671372939 0.6955099424864843 0.9815497227303179 0.746923686031179 1.1050813562370456 1.0 8.741692117982597 -6.540367019795107 1.2256098252051013 0.8759052110622805 1.1179149989751698 0.2813661824647745 0.1159463805587565 0.35265411227563037 1.008098472567641 0.017034217322697148 0.05936597141307192 2.881595254091295e-07 6.540367019795107 0.2420097879128893 GSS(ph)DGRGS(ph)DSESDLPHR ddPTM_A549_PD325901_60min_R1 1 GSSDGRGSDSESDLPHR 17 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 2 GS(0.47)S(0.511)DGRGS(0.87)DS(0.071)ES(0.078)DLPHR 45.395 0.011408 4095200.0 552.66 621.66 456.53 461.64 825.58 482.57 371.52 593.48 661.62 539.08 618.45 True False 608.765636353211 674.0494699159598 487.5128711379068 490.154454339491 767.5941088963832 478.6401099155736 385.6583969035445 581.6425758239468 633.8144122455269 505.04239680003155 542.3845706775599 1.1223874521222577 1.2427519261359536 0.898832484354955 0.9037027984169577 1.4152211371674643 0.882473683419211 0.7110423447735077 1.0723803870330324 1.1685701373358588 0.9311518507414774 1.0 9.083172328198133 -5.736249938909648 24.951042975203226 1.0445006542650732 1.182569691549228 0.09300942496795217 0.17943516938989254 457.022142388343 452689.44360117667 0.024342834222637097 0.0942020962508045 1.8354817093119051e-06 5.736249938909648 0.13806903728415487 GSS(ph)EEDEDAR ddPTM_A549_MK2206_60min_R1 1 GSSEEDEDAR 10 0 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 GS(0.043)S(0.957)EEDEDAR 50.108000000000004 0.027832 1052300.0 255.87 313.26 0.0 167.78 0.0 0.0 0.0 0.0 0.0 104.95 156.84 True False 299.05460057910744 329.2035959583574 0.0 208.88610753193043 0.0 0.0 0.0 0.0 0.0 81.24172210905942 117.89229943620896 2.5366762885214964 2.792409661468077 0.0 1.7718384366992337 0.0 0.0 0.0 0.0 0.0 0.6891181400106543 1.0 6.88132567630261 -5.756625535320405 24.995565182610388 0.43478920032076934 2.6645439632395154 0.7175893258722886 0.550933027550102 48.94892415264072 254154.65592972917 0.08151575117547602 0.29654036498984987 1.7513561214655988e-06 5.756625535320405 2.229754762918746 GSS(ph)EEDEDARTPDR ddPTM_A549_PD325901_60min_R1 2 GSSEEDEDARTPDR 14 1 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 GS(0.462)S(0.537)EEDEDART(0.001)PDR;GS(0.409)S(0.454)EEDEDART(0.137)PDR 57.498999999999995 0.0033349000000000005 43281000.0 488.37 582.89 470.13 551.41 651.86 570.93 411.16999999999996 477.98 414.67 530.02 250.22 True False 537.9489628810078 632.0121859526332 502.03584892135063 585.4693433570286 606.0756023949177 566.2805353712379 426.81729935085696 468.4463139319439 397.24286195376885 496.5544467462212 219.44452627526735 2.4514120812756754 2.8800544569512216 2.287757445777461 2.667960569782571 2.76186247468605 2.5805179330875885 1.944989499603489 2.134691267461067 1.810219961720414 2.2627789135344027 1.0 7.777712474490327 -9.160553227616937 0.39660021508653087 0.9473089129588421 2.7114455364895695 0.34522751970368504 0.4116781975727332 0.21937283403399152 0.08848844490323012 0.14189191017981043 0.09280607753262778 6.909502405817872e-10 9.160553227616937 1.7641366235307274 GSS(ph)FQSGR ddPTM_A549_MK2206_60min_R1 2 GSSFQSGR 8 0 Q96KP1 Q96KP1 EXOC2 Exocyst complex component 2 1 GS(0.094)S(0.879)FQS(0.027)GR;GS(0.005)S(0.99)FQS(0.005)GR 115.06 0.0013135999999999998 87149000.0 5453.200000000001 5310.9 5013.299999999999 4440.9 6327.5 4672.3 4629.200000000001 5691.8 6824.4 7170.6 7737.2 True False 6373.566842060385 5581.202125312015 5724.261324427132 5528.920699359578 5396.733131988564 5166.7196847782725 5470.265718664628 6498.630080406448 5278.684296327434 5550.756479802013 5815.839704143303 1.0958979556330875 0.9596554253955576 0.9842536272705508 0.9506659365836169 0.9279370489086624 0.8883875669918161 0.9405805518964903 1.1174018561372512 0.9076392343769052 0.9544204727388824 1.0 12.50577179098554 -5.261274618899338 21.433438538210826 0.9602090399576054 1.0958981142770257 0.30500622058154037 0.05748090332623074 1.751515279373534 226096.8217614175 0.008081027701054077 0.06463304251826098 5.4793038068226755e-06 5.261274618899338 0.13568907431942023 GSS(ph)FQSGRDDTWR ddPTM_A549_MK2206_60min_R1 1 GSSFQSGRDDTWR 13 1 Q96KP1 Q96KP1 EXOC2 Exocyst complex component 2 1 GS(0.141)S(0.718)FQS(0.141)GRDDTWR 112.34 9.6049e-06 17849000.0 2065.8 2107.8 1212.7 1245.8 3222.8 2371.3 2044.2 1848.1 2731.4 3035.8 3509.2 True False 2414.456536039084 2215.078016858283 1384.6790952332367 1551.0210559260875 2748.7303892173445 2622.229392058455 2415.6046794466088 2110.0738345688806 2112.7422611495176 2350.0106715453308 2637.768791007043 0.9153404742184763 0.8397544259414086 0.5249433157121387 0.5880049309909157 1.042066461089616 0.9941088851298996 0.915775744895512 0.7999464705787576 0.800958093200776 0.8909085131180688 1.0 11.36510239789214 -6.760251678058429 24.999831439382884 0.9112071030116731 0.7120590946642328 0.38845891846201375 0.12242957563582951 29.544199997170008 621846.3664845757 0.01973615223279009 0.03935116014775474 1.7367940472863424e-07 6.760251678058429 -0.1991480083474403 GSS(ph)LKIEER ddPTM_A549_PD325901_60min_R1 2 GSSLKIEER 9 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1;C9J813 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 GS(0.195)S(0.805)LKIEER;GS(0.038)S(0.962)LKIEER 111.79 8.5214e-05 80597000.0 13479.3 14129.400000000001 16468.9 15224.7 22404.0 28195.0 15112.5 14817.8 16260.5 13910.2 15514.3 True False 14847.708613063793 15320.134125133623 17586.578589540823 16165.095141197571 20830.420329604116 27965.38926802245 15687.61445737732 14522.247354660782 15577.12773241193 13031.907598070411 13606.139453250664 1.0912506566670903 1.125972152334031 1.2925472835234821 1.188073604326872 1.530957432942339 2.0553507748548907 1.1529805725774307 1.0673304800790682 1.144860214459317 0.957796121585167 1.0 13.731970160445618 -7.981816152893031 24.99988633502086 1.0721376739959114 1.383264008360389 0.28626773684053863 0.2513424313444114 269.2346063545818 370153.6186748892 0.0409446772419749 0.05656818791892112 1.0427587603744099e-08 7.981816152893031 0.3111263343644777 GSS(ph)PGPRPVEGT(ph)PASR ddPTM_A549_PD325901_60min_R1 1 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 2 GS(0.461)S(0.539)PGPRPVEGT(0.913)PAS(0.087)R 65.16 0.0015344000000000002 11135000.0 850.43 800.62 913.76 1126.1 1297.8 1289.3 933.74 1171.1 1124.2 1164.5 813.24 True False 936.7650275465231 868.0910571761347 975.7732484852547 1195.6566394413423 1206.6470051669444 1278.8003682660528 969.2739866621336 1147.741491789822 1076.9537835108083 1090.973271265187 713.2166355531072 1.3134368729636428 1.217149199699921 1.3681302424031825 1.6764284227808257 1.6918379984661696 1.7930041231782674 1.3590176369210054 1.6092466644440173 1.5099953223547837 1.5296520255996628 1.0 9.478196543536948 -10.545022893691174 0.7790992738941028 0.9886195174145976 1.5105284452987688 0.0 0.22919285895597524 0.4486379185904477 0.47316682784797304 0.13934416919554335 0.036055232614736483 2.8508679809722006e-11 10.545022893691174 0.5219089278841712 GSS(ph)PGPRPVEGTPASR ddPTM_A549_MK2206_60min_R1 4 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 GS(0.103)S(0.897)PGPRPVEGTPASR;GS(0.023)S(0.977)PGPRPVEGTPASR;GS(0.158)S(0.842)PGPRPVEGTPASR;GS(0.046)S(0.953)PGPRPVEGTPASR 108.45 1.774e-07 1145143000.0 6294.92 6732.389999999999 6144.92 6313.79 7100.5 5912.92 4775.58 5202.7699999999995 7907.4 9083.6 10063.7 True False 7357.348599982163 7075.039894637316 7016.362056469547 7860.668833436803 6056.02585597547 6538.621269721361 5643.241069891222 5940.27858031488 6116.386525523064 7031.608451165816 7564.605546009796 0.9726017510408117 0.9352820648221747 0.9275251715101737 1.0391379676873138 0.8005739121678226 0.8643704195746698 0.7460059927206565 0.7852727474267681 0.8085532666999876 0.9295406625497973 1.0 12.885049140183751 -6.761700426114491 24.99999974781845 0.8757361022524242 0.963317711972082 0.3392620265968075 0.07479916782843732 10.562719508897763 1011726.2011111451 0.014161074589903939 0.02800705327325931 1.731009988420775e-07 6.761700426114491 0.0875816097196579 GSS(ph)PGPRPVEGTPASR ddPTM_A549_PD325901_60min_R1 4 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 GS(0.032)S(0.967)PGPRPVEGT(0.001)PASR;GS(0.007)S(0.993)PGPRPVEGTPASR;GS(0.145)S(0.855)PGPRPVEGTPASR;GS(0.008)S(0.992)PGPRPVEGTPASR 131.03 3.5992999999999997e-10 1309253000.0 7991.5 7848.5 7870.500000000001 7794.3 9898.900000000001 9771.199999999999 8625.8 8758.1 10043.400000000001 8999.0 9899.8 True False 8802.791196968636 8509.920639313148 8404.639459161272 8275.736208860357 9203.635413351105 9691.626586831033 8954.059539218872 8583.412824903458 9621.310824864313 8430.801604221053 8682.187360002765 1.0138909507437572 0.9801586036390763 0.9680324911991528 0.9531856277353731 1.0600595255235512 1.116265542883648 1.0313137885584653 0.9886233121903886 1.1081666895588913 0.9710458038558578 1.0 13.083842840681847 -6.769340066222405 24.854042621392182 1.05138441865336 0.9781424351890644 0.2658896011090712 0.04567927899917859 141.5312791316205 445231.6187024491 0.006940261628692075 0.013287614743096074 1.7008261865037124e-07 6.769340066222405 -0.07324198346429567 GSS(ph)PLPTATTPKPLIPTEASIR ddPTM_A549_MK2206_60min_R1 2 GSSPLPTATTPKPLIPTEASIR 22 1 A0A3B3IUD2;Q9BUK6-7;Q9BUK6-3;Q9BUK6-2;Q9BUK6 A0A3B3IUD2 MSTO1 Protein misato homolog 1 1 GS(0.149)S(0.85)PLPTATTPKPLIPTEASIR;GS(0.171)S(0.827)PLPT(0.002)ATTPKPLIPTEASIR 98.01899999999999 1.123e-07 19733300.0 4459.6 3914.7 3701.6 4001.2 5345.1 4600.9 4266.8 4204.5 6390.5 5658.5 6131.3 True False 5212.2714532480895 4113.941508964382 4226.54254054205 4981.494179620694 4558.842870611155 5087.764184169753 5042.0223296462145 4800.5007507412265 4943.061953531515 4380.240920001074 4608.728994728566 1.1309563784743801 0.8926412279111835 0.9170733504565666 1.0808824266556993 0.9891757306245452 1.103940845727554 1.0940157981545988 1.0416105516796512 1.0725434190609509 0.9504227575566202 1.0 12.170153220603911 -7.144691040409708 21.637500338441285 1.045069994134915 0.9957072649531599 0.06980730146374925 0.07386338741823253 13.473679871618755 2460.971745377273 0.010113510616276768 0.017517154331855442 7.166530600129669e-08 7.144691040409708 -0.049362729181755216 GSS(ph)PLPTATTPKPLIPTEASIR ddPTM_A549_PD325901_60min_R1 2 GSSPLPTATTPKPLIPTEASIR 22 1 A0A3B3IUD2;Q9BUK6-7;Q9BUK6-3;Q9BUK6-2;Q9BUK6 A0A3B3IUD2 MSTO1 Protein misato homolog 1 1 GS(0.035)S(0.964)PLPT(0.001)ATTPKPLIPTEASIR;GS(0.131)S(0.869)PLPTATTPKPLIPTEASIR 136.4 1.124e-22 33058000.0 5058.1 5632.700000000001 5640.700000000001 5422.299999999999 7208.400000000001 5846.5 6238.9 6595.7 6797.5 6539.799999999999 6803.4 True False 5571.594588423584 6107.387396962372 6023.511822284601 5757.223156063217 6702.106851629987 5798.888042400897 6476.324753557076 6464.143589273449 6511.824713942998 6126.875911910747 5966.624930305946 0.9337933343395014 1.0235916398802711 1.009534182664929 0.9649044850834974 1.123265988714717 0.971887475773268 1.0854251489250213 1.0833835987310823 1.091374904574251 1.0268578942830557 1.0 12.542699374744993 -6.720968735744647 24.999997680846217 1.0495641578252644 0.987756888390213 0.34956715439852926 0.04652313278362036 166.55773808570711 102887.16273732187 0.007080518861136279 0.014739140496745793 1.9012151408291335e-07 6.720968735744647 -0.061807269435051326 GSS(ph)PQNTTTPK ddPTM_A549_MK2206_60min_R1 3 GSSPQNTTTPK 11 0 Q27J81-2;Q27J81 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 GS(0.135)S(0.827)PQNT(0.03)T(0.008)T(0.001)PK;GS(0.08)S(0.915)PQNT(0.004)T(0.001)TPK;GS(0.064)S(0.936)PQNTTTPK 88.803 0.0003037 9415100.0 3426.46 3830.6 3652.2000000000003 3015.1800000000003 4944.3 3566.5000000000005 4103.3 3673.4999999999995 4833.4 5331.7 4850.3 True False 4004.762679095983 4025.561178184526 4170.136877719821 3753.8992353565727 4217.000019674607 3943.904662748903 4848.816496024489 4194.2298746219285 3738.642617353764 4127.265266973529 3645.8366485299935 1.0984481931494954 1.1041529191406965 1.143807932097349 1.0296399968633125 1.156661810773916 1.0817557238443722 1.3299598867051652 1.150416290952873 1.0254553283019934 1.1320488724138664 1.0 11.832034207631255 -8.801586374257374 5.920004099573816 1.0114676859656322 1.1377274321889157 0.13130368056312536 0.07964838377524756 0.13915270295993584 12.223529094712385 0.012426340279196495 0.013300319518605072 1.5791145157719929e-09 8.801586374257374 0.1262597462232835 GSS(ph)PQNTTTPK ddPTM_A549_PD325901_60min_R1 2 GSSPQNTTTPK 11 0 Q27J81-2;Q27J81 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 GS(0.007)S(0.993)PQNTTTPK;GS(0.015)S(0.985)PQNTTTPK 136.24 3.9936e-08 18021400.0 7556.299999999999 8521.0 8783.2 8560.2 10414.8 9273.3 9649.8 9750.5 8956.9 9106.7 9655.2 True False 8323.410013345943 9239.0945744521 9379.280769672232 9088.944112375251 9683.30037710948 9197.781319352815 10017.028419573178 9556.018628380729 8580.472641458782 8531.701407840852 8467.671609355615 0.9829632509779569 1.0911021353549148 1.1076575949531882 1.073369933516696 1.143561161064721 1.0862231961370028 1.1829731810224828 1.1285296678041505 1.0133213753800439 1.0075616770984002 1.0 13.0477496049357 -8.7969707640836 9.212570182674288 1.0062052297172797 1.1024537780036223 0.4321631085821106 0.047180309794943275 0.19773380882974068 48.232423165698215 0.008076169572367127 0.008616811105896252 1.5959865825409897e-09 8.7969707640836 0.09624854828634266 GSS(ph)PQVMSR ddPTM_A549_PD325901_60min_R1 3 GSSPQVMSR 9 0 C9JBA5;C9JMW0;Q5DX21-3;Q5DX21-2;Q5DX21 C9JBA5 IGSF11 Immunoglobulin superfamily member 11 1 GS(0.114)S(0.866)PQVMS(0.019)R;GS(0.021)S(0.753)PQVMS(0.226)R;GS(0.163)S(0.837)PQVMSR 86.189 0.00043059 46048000.0 1941.5299999999997 2267.16 2112.88 2354.94 2818.99 2325.41 2069.3 2096.01 2112.7200000000003 2134.0299999999997 2476.84 True False 2138.632696321156 2458.2215297987127 2256.272742579591 2500.3992953432157 2620.99386738755 2306.472631947227 2148.0483438644083 2054.2034362619643 2023.9297255817085 1999.2869816041605 2172.204381982387 0.9845448771120731 1.1316713796310924 1.038701864932471 1.1510884132649217 1.2066055520040848 1.0618119782275297 0.988879481913238 0.9456768678402474 0.9317400067735059 0.9203954278830708 1.0 11.0849441368837 -7.715224914364926 3.373023629519776 0.9655801592216475 1.1054255775650128 0.587550221393716 0.0582923595816101 0.13475074994227276 3.1541597800962737 0.009093582287297564 0.01352089232663794 1.926526936425291e-08 7.715224914364926 0.13984541834336528 GSS(ph)PTPPCSPVQPSK ddPTM_A549_MK2206_60min_R1 2 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GS(0.006)S(0.99)PT(0.003)PPCSPVQPSK;GS(0.002)S(0.998)PTPPCSPVQPSK 235.38 2.3468999999999997e-64 21246000.0 2801.2 3797.4 4374.4 3499.1 5069.0 4473.2 4209.4 4040.8 5487.0 5582.4 5689.1 True False 3273.9740772353 3990.671439993192 4994.755697359831 4356.379657080568 4323.356814863696 4946.551054930156 4974.193492643847 4613.595774431001 4244.203260938495 4321.331962854821 4276.339458827701 0.7656020081560163 0.9331980022669153 1.1679979443748543 1.0187169889162189 1.0109947670171358 1.156725536537781 1.1631895785016686 1.0788656557437455 0.9924851153191624 1.010521265783576 1.0 12.062160664411094 -5.409508711113948 3.662677569673018 1.0351229353308693 0.7688439865081743 0.5881640518050395 0.07177293864402531 0.15419998129111126 3.3617154786226355 0.011061515427374607 0.08385618318388995 3.894854952936441e-06 5.409508711113948 -0.266278948822695 GSS(ph)PTPPCSPVQPSK ddPTM_A549_PD325901_60min_R1 2 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GS(0.011)S(0.987)PT(0.003)PPCSPVQPSK;GS(0.075)S(0.919)PT(0.006)PPCSPVQPSK 194.23 2.7206e-35 33972000.0 4844.200000000001 4740.6 4024.7000000000003 4687.299999999999 5287.3 3971.9 4845.9 4950.6 3660.5 4262.6 5199.799999999999 True False 5335.979617888444 5140.106999137144 4297.840344487181 4976.823875369329 4915.938288194779 3939.554163279246 5030.313376278225 4851.856399329431 3506.6619147316424 3993.4587085401317 4560.2575642480015 1.1701048773477254 1.1271527817716063 0.9424556143893829 1.0913471016170597 1.0779957532958842 0.8638885211583195 1.1030765928037527 1.0639435012108829 0.7689613723188682 0.8757090257025129 1.0 12.154899595054179 -7.503040230361206 0.6832117608182394 0.9016818911383855 1.0961281521275446 0.29347176526477003 0.10271456979903852 0.7045167775436173 0.652925097834793 0.02531486323545767 0.058943855608629914 3.140217790001737e-08 7.503040230361206 0.19444626098915907 GSS(ph)RQGS(ph)PGSVSK ddPTM_A549_MK2206_60min_R1 2 GSSRQGSPGSVSK 13 1 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 2 GS(0.486)S(0.556)RQGS(0.94)PGS(0.018)VS(0.001)K;GS(0.533)S(0.593)RQGS(0.804)PGS(0.064)VS(0.006)K 56.482 0.019223 39872200.0 5532.0 6748.099999999999 7300.7 5889.5 5845.5 3945.8999999999996 4025.6000000000004 2662.9 6784.8 10328.1 10239.8 True False 6465.666355585353 7091.549466534488 8336.049039803152 7332.427764389699 4985.6346934870235 4363.452518923564 4756.999411789581 3040.374229789227 5248.053633099234 7994.975036823029 7696.975055897044 0.840026933779872 0.9213423994535739 1.083029239313499 0.9526375895907255 0.6477394895111782 0.566904853820528 0.6180349263500604 0.3950089753064539 0.6818332650147324 1.038716505999025 1.0 12.910075856535414 -6.7348271428599125 22.324713953461334 0.7603079657408207 0.956820560272662 0.256059390094485 0.1848165829425473 100.8100245320988 84566.20843269216 0.03081767460118289 0.06412460481555377 1.841504808189336e-07 6.7348271428599125 0.19651259453184133 GSS(ph)RQGS(ph)PGSVSK ddPTM_A549_PD325901_60min_R1 2 GSSRQGSPGSVSK 13 1 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 2 GS(0.004)S(0.996)RQGS(0.99)PGS(0.01)VSK;GS(0.092)S(0.911)RQGS(0.95)PGS(0.047)VS(0.001)K 160.93 4.204e-18 32288000.0 8624.0 9432.2 8491.3 9282.1 10732.599999999999 13295.7 12362.3 12061.2 10944.5 11345.3 11208.9 True False 9499.50213134675 10227.084596308778 9067.57068033493 9855.434235821396 9978.779201459967 13187.424227375288 12832.754091410132 11820.629904171647 10484.54072552397 10628.955821798983 9830.276359071393 0.9663514823345323 1.040365928967115 0.9224125903609376 1.0025592237523198 1.0151066803174396 1.3415110364833145 1.3054316707554257 1.2024717792662616 1.066556050161176 1.081246898210605 1.0 13.263016260358908 -7.017008785115843 24.846536459412466 1.0922154658792016 0.9859694659421712 0.2802836422297137 0.11148046318802848 1162.0119990116566 1697475.7398875805 0.020077160336559558 0.035331587008605725 9.615928266287598e-08 7.017008785115843 -0.10624599993703043 GSS(ph)SLDR ddPTM_A549_MK2206_60min_R1 1 GSSSLDR 7 0 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 GS(0.055)S(0.545)S(0.4)LDR 60.59 0.028669 62426000.0 12652.0 12606.0 10536.0 8907.1 11295.0 8945.7 8756.0 9162.0 12755.0 15597.0 16059.0 True False 14787.348288298244 13247.591555420593 12030.163228644657 11089.339899854913 9633.520462396018 9892.328036324936 10346.851860500194 10460.741557448233 9866.012865549568 12073.626867413055 12071.107094147412 1.2250200559870588 1.0974628467875653 0.996608110160616 0.9186680072809145 0.7980643686830315 0.8195046203443228 0.8571584842882215 0.8665933850027764 0.8173246073123677 1.0002087441728411 1.0 13.559270377596896 -5.688007136717055 1.471598947243786 0.8896914279491157 1.2409573934871725 0.741090655063989 0.06483441517472711 0.2756144297959651 0.8979105363217804 0.011532595339811984 0.111928441045653 2.0511284725630216e-06 5.688007136717055 0.3512659655380568 GSS(ph)SLDR ddPTM_A549_PD325901_60min_R1 1 GSSSLDR 7 0 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 GS(0.058)S(0.537)S(0.405)LDR 57.96 0.033905000000000005 91721000.0 14701.0 13118.0 10957.0 11589.0 14277.0 12247.0 12035.0 13206.0 12978.0 14504.0 15015.0 True False 16193.434697695795 14223.499897624997 11700.607909793544 12304.826209471366 13274.232772976158 12147.264492479902 12492.998510804702 12942.595970093422 12432.5797922107 13588.214964731878 13168.25018792718 1.2297332194175763 1.0801359098314582 0.8885469020417618 0.9344313810769321 1.0080483423033795 0.9224661074268371 0.9487212296633339 0.9828637659056143 0.9441330180382695 1.0318922234018402 1.0 13.684776030920787 -5.456867377675601 3.367496283043515 0.9641972955461581 1.2239541076920226 0.7950396804650777 0.04071812287462527 0.07527118311324016 1.5231259619804167 0.005134399235405328 0.037715453587948256 3.4924695019954698e-06 5.456867377675601 0.25975681214586455 GSS(ph)SLDRLYSR ddPTM_A549_PD325901_60min_R1 2 GSSSLDRLYSR 11 1 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 GS(0.066)S(0.467)S(0.467)LDRLYSR;GS(0.042)S(0.738)S(0.219)LDRLYSR 98.94200000000001 7.6614e-05 60316000.0 5805.9 5920.7 5634.4 7809.0 7498.400000000001 10424.3 8188.5 10127.7 7964.4 6585.299999999999 8599.5 True False 6395.310693922316 6419.658167698457 6016.7842663996225 8291.344194474237 6971.738252075682 10339.407956965644 8500.11784841913 9925.69507847305 7629.6839649470585 6169.503034145669 7541.816016721927 0.8479802052638852 0.8512085356450768 0.7977898496938985 1.0993829836329123 0.9244110750802921 1.3709440715658958 1.1270651298801813 1.3160882016301538 1.0116507679357742 0.8180394510375847 1.0 12.880696240896043 -6.261265532990068 24.999823723090785 1.0618195808670579 0.8342144215471873 0.34657617738422 0.15145714924552717 13.713133537673135 1971783.2463166183 0.019865955053927836 0.0491856678301015 5.47941844097094e-07 6.261265532990068 -0.22760515931987058 GSS(ph)TPTKGIENK ddPTM_A549_MK2206_60min_R1 1 GSSTPTKGIENK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GS(0.223)S(0.384)T(0.324)PT(0.069)KGIENK 54.7 0.016648 1894200.0 862.74 1180.9 979.6 943.61 1398.6 1180.9 948.17 931.05 1917.3 1837.2 2036.4 True False 1008.3494200321232 1241.0027659682828 1118.5220101348048 1174.7944923602627 1192.8677927142164 1305.862054182021 1120.4402156887247 1063.0291887210408 1483.0346112989562 1422.175244009186 1530.7056782191783 0.6587480757275535 0.8107389837424948 0.7307231076820022 0.7674855519756205 0.779292720793979 0.8531111321813739 0.7319762588143294 0.694470010693217 0.9688568040227808 0.9290977777411419 1.0 10.579981194937202 -8.798323682115191 9.170100798929486 0.9855038743015423 0.7584681893432083 0.7562195030676572 0.05340774939320724 0.08837532304238546 20.650827282304633 0.008530771264556184 0.009099193484442027 1.5910224870599152e-09 8.798323682115191 -0.22703568495833404 GSS(ph)TPTKGIENK ddPTM_A549_PD325901_60min_R1 2 GSSTPTKGIENK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GS(0.009)S(0.488)T(0.488)PT(0.015)KGIENK;GS(0.02)S(0.477)T(0.477)PT(0.026)KGIENK 81.44800000000001 0.00020449999999999998 283550000.0 20611.0 21277.7 24534.0 24851.7 23689.8 30889.0 29284.0 29160.0 27681.0 28837.0 28107.0 True False 22703.413546983753 23070.846453094644 26199.024774926966 26386.733066694233 22025.910173373304 30637.45022521531 30398.418644819656 28578.380924422545 26517.663833270486 27016.226898646804 24650.01718495298 0.9210303334328916 0.9359363232889629 1.062840020692543 1.0704549562262127 0.8935454287155021 1.2428977227617195 1.2332007080050091 1.1593655578409714 1.0757665454877479 1.0959922135526226 1.0 14.58930103193916 -5.750455671793791 5.313501719231595 1.0660375673523945 0.9254680676970989 0.2683635876784528 0.09681007774345532 0.19807516077139725 16.34170255532878 0.014367664408839721 0.05369157029177327 1.7764145767239438e-06 5.750455671793791 -0.14056949965529564 GSS(ph)VPENDR ddPTM_A549_MK2206_60min_R1 1 GSSVPENDR 9 0 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 GS(0.105)S(0.895)VPENDR 63.076 0.0068911 1172100.0 199.22 205.82 223.81 236.68 227.78 222.73 307.66 399.68 350.93 549.67 342.99 True False 232.84346553863224 216.29535887170124 255.549623405748 294.6666106249691 194.2738637383414 246.29914076379177 363.55783958445545 456.33586396866497 271.44491532005566 425.49916523760544 257.81611695757033 0.9031377412954834 0.8389520462264106 0.9912088756181394 1.1429332428952197 0.7535365361596602 0.9553287190510517 1.4101439579290824 1.770005185687308 1.0528624762614367 1.650397850447927 1.0 8.010198644040502 -7.554850165175878 24.868528682710203 1.1223358854962546 0.9285629579785434 0.19767870380910746 0.2844677656796337 324.7922004951028 252633.90583765003 0.04085894757377892 0.06060387015590381 2.7870825669758602e-08 7.554850165175878 -0.19377292751771125 GSS(ph)VPENDR ddPTM_A549_PD325901_60min_R1 1 GSSVPENDR 9 0 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 GS(0.037)S(0.963)VPENDR 66.056 0.0055412 2150600.0 519.42 552.51 629.28 528.23 732.02 422.04 606.93 343.06 694.09 490.98 658.41 True False 572.1511360232056 599.0719567340135 671.9867249680457 560.8575674026288 680.6054405319054 418.60304616691616 630.0270532748395 336.2173991746362 664.9198110629932 459.979439008829 577.4297440048704 0.9908584411584793 1.037480252712719 1.1637549536457161 0.9713000988011075 1.1786809522686534 0.7249419527016701 1.0910886732387057 0.5822654663452882 1.1515163844025758 0.7965981035520562 1.0 9.173501613980235 -4.221706295081132 14.368696175558105 1.0249669944057724 1.0080108303822322 0.0 0.1921770924363239 0.0 0.0 0.02232015155851303 0.0 6.001968404949656e-05 4.221706295081132 -0.016956164023540277 GSSAAASPGS(ph)PPPGR ddPTM_A549_MK2206_60min_R1 2 GSSAAASPGSPPPGR 15 0 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 GSSAAASPGS(1)PPPGR;GSSAAASPGS(1)PPPGR 184.66 2.6435999999999997e-33 54962000.0 5719.1 6653.1 5618.799999999999 4959.9 7927.0 5899.299999999999 5590.2 5383.5 8172.5 8646.6 8289.1 True False 6684.344261429532 6991.714372312292 6415.6303292623925 6175.075722658368 6760.9488008334 6523.56001036159 6605.866979279142 6146.627611277296 6321.441798800773 6693.327054675494 6230.687702478192 1.0728100300663286 1.1221416810108151 1.0296825383674169 0.9910745037345229 1.0851047466468753 1.0470048126095153 1.0602147459022422 0.9865086977208853 1.0145656628379054 1.074251731797325 1.0 12.605175691924149 -2.0000000259916138 0.17611917624677303 0.9937373538176965 1.4070481786388602 0.10527110876039958 0.039236030142664684 37.262848171486304 0.38634369485201575 0.03592956821719874 4.141361335542006 0.009999999401520994 2.0000000259916138 0.41331082482116377 GSSAAASPGS(ph)PPPGR ddPTM_A549_PD325901_60min_R1 2 GSSAAASPGSPPPGR 15 0 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 GSSAAASPGS(1)PPPGR;GSSAAASPGS(1)PPPGR 176.4 1.4470000000000002e-27 66685000.0 8065.200000000001 7536.3 8066.2 8410.4 9272.5 9011.3 8310.6 9470.0 8854.2 10180.8 9056.2 True False 8883.97316671357 8171.410449647155 8613.620838000965 8929.891306595731 8621.23158838842 8937.914960486994 8626.864430734813 9281.113420928712 8482.088765309913 9537.982550533796 7942.3448119817585 1.118557979667576 1.0288410592952133 1.0845186203709671 1.1243394133586555 1.0854768701785018 1.1253496507735758 1.0861860867234565 1.168560877252181 1.0679577588363955 1.2009026019803208 1.0 12.955349280595929 -9.790608770897567 0.978185416561331 1.010137365467398 1.0991652642215546 0.0 0.06696145572474908 0.2699910222553801 0.5323217749088303 0.011520546470947357 0.006929089392850133 1.6195383228531252e-10 9.790608770897567 0.08902789875415662 GSSANASKWS(ph)PPQNYK ddPTM_A549_MK2206_60min_R1 1 GSSANASKWSPPQNYK 16 1 H3BRF9;Q96K21-2;Q96K21;H3BRM1;Q96K21-3 H3BRF9;Q96K21-3 ZFYVE19 Abscission/NoCut checkpoint regulator 1 GS(0.033)S(0.031)ANAS(0.025)KWS(0.909)PPQNY(0.001)K 44.788000000000004 0.013632 9372000.0 3177.6 2673.6 2651.5 2298.2 3571.8 3076.2 2688.2 1998.2 4584.6 4426.5 4320.8 True False 3713.901195138831 2809.674820131089 3027.5225703066913 2861.2591031701168 3046.3929515348477 3401.7214421837016 3176.6111433755837 2281.4509692308516 3546.1954201018075 3426.5505756622338 3247.8261119865597 1.1435037058887345 0.8650939807896698 0.9321689234325671 0.8809766916431385 0.9379790809279184 1.0473841039793261 0.9780730352686842 0.7024547776159676 1.0918673900102207 1.055028950908445 1.0 11.665258677625374 GSSANASKWS(ph)PPQNYK ddPTM_A549_PD325901_60min_R1 2 GSSANASKWSPPQNYK 16 1 H3BRF9;Q96K21-2;Q96K21;H3BRM1;Q96K21-3 H3BRF9;Q96K21-3 ZFYVE19 Abscission/NoCut checkpoint regulator 1 GSSANAS(0.175)KWS(0.824)PPQNYK;GS(0.02)S(0.018)ANAS(0.022)KWS(0.94)PPQNY(0.001)K 101.92 3.2869999999999997e-07 31936000.0 11460.599999999999 10759.0 10741.8 12846.1 10309.0 14304.3 12630.4 11103.4 15343.9 13242.800000000001 17461.2 True False 12624.07167515219 11665.698688713783 11470.803143690817 13639.574421390125 9584.931404119297 14187.810523375552 13111.056783620072 10881.9339765512 14699.04924284958 12406.647347969621 15313.583095666605 0.8243708605809253 0.761787663660173 0.7490606915462387 0.890684716710736 0.6259104315587392 0.9264853584390957 0.8561717203421975 0.7106066495718131 0.9598700154641846 0.8101727251201203 1.0 13.902524265884212 -8.859558671288227 6.628755196096682 0.9822700773747534 0.7950986476267007 0.2115300027250271 0.0953956497680386 0.11391251209941923 6.627588613790193 0.013075108057806737 0.013880569889587384 1.3817877198037541e-09 8.859558671288227 -0.18717142974805268 GSSDAVS(ph)PDTFTAEVSSDAVPDVR ddPTM_A549_PD325901_60min_R1 1 GSSDAVSPDTFTAEVSSDAVPDVR 24 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 GS(0.011)S(0.011)DAVS(0.742)PDT(0.209)FT(0.025)AEVSSDAVPDVR 62.848 0.0001153 1743200.0 423.72 800.56 429.56 511.41 810.82 594.34 346.33 335.08 502.1 435.18 732.55 True False 466.7357424738223 868.026000765564 458.7125247541215 542.9986342036201 753.870800377147 589.4998920927987 359.50977766904793 328.39656653482524 480.99848309978404 407.7026605317168 642.4509940170531 0.7264923656751839 1.351116285676606 0.7140039147358616 0.8451985276081725 1.1734292691547092 0.9175795470512591 0.55959097427983 0.5111620490793549 0.7486928770897295 0.6346050738943908 1.0 9.327442599902225 -7.533323850229844 24.978735793477494 0.8190666011473868 0.9716024597576659 0.16239636713082362 0.22583722069311188 427.08487174344873 1021340.402324048 0.03586781979133757 0.05323092158159263 2.9287085141891062e-08 7.533323850229844 0.15253585861027907 GSSDAVSPDTFTAEVSSDAVPDVRS(ph)PATPACR ddPTM_A549_MK2206_60min_R1 2 GSSDAVSPDTFTAEVSSDAVPDVRSPATPACR 32 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 GSSDAVSPDT(0.001)FT(0.001)AEVS(0.001)S(0.001)DAVPDVRS(0.956)PAT(0.04)PACR;GSSDAVSPDT(0.002)FT(0.002)AEVS(0.006)S(0.006)DAVPDVRS(0.787)PAT(0.198)PACR 58.172 0.00075033 5565800.0 1330.63 1816.44 1752.6 1034.87 1898.13 1694.8400000000001 1356.37 1787.99 2479.5 2112.19 2014.88 True False 1555.2078132199097 1908.8890373574645 2001.1450336486919 1288.4131964570797 1618.9175914376071 1874.1868438562594 1602.804871862339 2041.4430579897262 1917.8972089478757 1635.0448120203366 1514.5296881409631 1.0268585854720864 1.260384033607532 1.3212979906026363 0.8507018426549074 1.0689243031114015 1.2374711823290596 1.0582855419821653 1.347905606588361 1.2663318678830477 1.0795726388350313 1.0 10.564654143095106 GSSDAVSPDTFTAEVSSDAVPDVRS(ph)PATPACR ddPTM_A549_PD325901_60min_R1 2 GSSDAVSPDTFTAEVSSDAVPDVRSPATPACR 32 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 GSSDAVSPDT(0.005)FT(0.005)AEVS(0.02)S(0.02)DAVPDVRS(0.947)PAT(0.003)PACR;GSSDAVSPDT(0.001)FT(0.001)AEVS(0.001)S(0.001)DAVPDVRS(0.981)PAT(0.015)PACR 74.767 5.2602999999999994e-06 10981800.0 3106.5 3345.3 3039.8 2937.1 2901.4 3521.8 3209.6 3345.4 3658.9 3268.8 4258.1 True False 3421.8695931155703 3627.2201713313693 3246.0991078023553 3118.517996361925 2697.6156732866157 3493.11962844907 3331.7430843605107 3278.6733725844692 3505.129157167493 3062.407410143101 3734.3806943198615 0.9163151465302847 0.9713043388555732 0.8692469711885021 0.8350830436504002 0.7223729700053865 0.9353946248067962 0.8921808880996578 0.8779697735615062 0.9386105606476948 0.8200576376160957 1.0 11.86665329251852 -9.193243939377107 0.8013446158620683 0.98842987258773 0.8722734193007976 0.0 0.07904090173241646 0.4340825914445578 0.5974770031255846 0.01880139126205969 0.015047745856966232 6.408495159566504e-10 9.193243939377107 -0.11615645328693236 GSSDGRGS(ph)DSESDLPHR ddPTM_A549_MK2206_60min_R1 2 GSSDGRGSDSESDLPHR 17 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 GS(0.116)S(0.116)DGRGS(0.731)DS(0.037)ESDLPHR;GS(0.091)S(0.091)DGRGS(0.621)DS(0.091)ES(0.105)DLPHR 92.492 1.9981999999999998e-06 12522900.0 744.0 742.2 705.1 603.4300000000001 1125.55 767.6199999999999 828.09 788.52 1090.1100000000001 1470.81 1694.51 True False 869.5690109464027 779.9748098074854 805.0937825092396 751.2703770890017 959.9830860070695 848.849038895083 978.543234029421 900.2951247412227 843.2018255479604 1138.5529994780916 1273.7164009031533 0.6827022171731619 0.6123614403131098 0.6320824493885548 0.5898254717897162 0.753686680430883 0.6664348816527683 0.7682583291975874 0.7068254158483404 0.6620012311610903 0.8938826560377008 1.0 10.314828375006286 -12.112981441439825 0.32024580944671016 1.3983303552341269 0.6470870911931312 0.7472684281495295 0.05985807377813754 2.111195594478101 0.13500873686888545 0.636890703018627 0.01930525808501523 7.709364125272314e-13 12.112981441439825 -0.7512432640409956 GSSDGRGS(ph)DSESDLPHR ddPTM_A549_PD325901_60min_R1 4 GSSDGRGSDSESDLPHR 17 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 GS(0.031)S(0.031)DGRGS(0.819)DS(0.059)ES(0.059)DLPHR;GS(0.175)S(0.142)DGRGS(0.651)DS(0.032)ESDLPHR;GS(0.001)S(0.001)DGRGS(0.993)DS(0.003)ES(0.002)DLPHR;GS(0.048)S(0.04)DGRGS(0.901)DS(0.011)ESDLPHR 107.78 3.765300000000001e-09 39842900.0 1484.32 1861.15 1676.2199999999998 1927.81 2201.77 2243.79 2171.24 2501.92 2663.33 2373.69 3071.15 True False 1635.0070737013698 2017.9956422064922 1789.9783691297005 2046.886445325826 2047.1252708941468 2225.5173181662035 2253.8677263481154 2452.0172428817286 2551.3995020795587 2223.8148083035308 2693.418019623881 0.607037994766846 0.74923224969301 0.6645750329463007 0.7599586957585073 0.7600473658299854 0.8262799543002178 0.8368057649895927 0.910373816844122 0.9472720103193807 0.8256478541767804 1.0 11.39522243876354 -7.450098259649225 0.4091764710566606 0.999757147093045 0.6277619903162197 0.7110966887814621 0.06003585093234608 0.19960718946932782 0.06432007255849438 0.00979524639340477 0.02861516163322109 3.547331213579202e-08 7.450098259649225 -0.37199515677682526 GSSDGRGSDS(ph)ESDLPHR ddPTM_A549_MK2206_60min_R1 1 GSSDGRGSDSESDLPHR 17 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 GS(0.061)S(0.061)DGRGS(0.365)DS(0.513)ESDLPHR 85.97399999999999 1.7647e-05 6447700.0 783.55 655.49 518.75 391.91 790.05 487.17 337.42 652.96 1042.2 861.34 1049.9 True False 915.7940840417394 688.8516411758408 592.3165503852898 487.92796759350875 673.8346915729063 538.7220060427265 398.72484636477583 745.5190796061337 806.1433640514117 666.7626957733893 789.1808542340974 1.1604362664506358 0.8728691750186636 0.7505460214948257 0.6182714202653135 0.8538406474988107 0.6826344090234653 0.5052388742397198 0.9446745642729287 1.02149381821202 0.8448794622881274 1.0 9.624212146043277 -8.504982071823672 24.347342647353198 1.0087253685935362 0.7699851879886735 0.18826435600465818 0.16466750567167576 462.3672796879552 629023.605674208 0.02582945652803809 0.03089858187070714 3.126208417943752e-09 8.504982071823672 -0.23874018060486268 GSSEQAES(ph)DNMDVPPEDDSKEGAGEQK ddPTM_A549_MK2206_60min_R1 4 GSSEQAESDNMDVPPEDDSKEGAGEQK 27 1 Q12906-5;Q12906-2;Q12906-3;Q12906;K7ER69;K7EKJ9;K7EM82;K7EJ09;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 GSSEQAES(0.998)DNMDVPPEDDS(0.002)KEGAGEQK;GSS(0.001)EQAES(0.998)DNMDVPPEDDS(0.001)KEGAGEQK;GSSEQAES(0.903)DNMDVPPEDDS(0.096)KEGAGEQK;GSS(0.001)EQAES(0.89)DNMDVPPEDDS(0.109)KEGAGEQK 169.73 6.6781e-49 117225000.0 15141.3 16098.3 16120.4 15079.1 20812.7 17770.4 16522.699999999997 17952.8 23263.1 22944.6 22438.0 True False 17696.7812707564 16917.634708601247 18406.51512063813 18773.480176926532 17751.179400416975 19650.851932963156 19524.660716706996 20497.66437814414 17994.044993537143 17761.39892428322 16866.025342703764 1.0492561769102298 1.003059960177269 1.0913368589595285 1.1130945077731627 1.0524814850996371 1.1651145740430247 1.1576325968912027 1.215322754570117 1.0668811784586438 1.0530874087632505 1.0 14.041832406880793 -9.603317772610822 1.4390619256821207 1.0160205082102833 1.1034189953225524 0.19183615985390645 0.05878378342972174 0.35659958759617144 1.4996587660522933 0.015618238925620823 0.011828264392759347 2.492770103399954e-10 9.603317772610822 0.08739848711226905 GSSEQAES(ph)DNMDVPPEDDSKEGAGEQK ddPTM_A549_PD325901_60min_R1 4 GSSEQAESDNMDVPPEDDSKEGAGEQK 27 1 Q12906-5;Q12906-2;Q12906-3;Q12906;K7ER69;K7EKJ9;K7EM82;K7EJ09;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 GSSEQAES(1)DNMDVPPEDDSKEGAGEQK;GSSEQAES(1)DNMDVPPEDDSKEGAGEQK;GS(0.002)S(0.004)EQAES(0.994)DNMDVPPEDDSKEGAGEQK;GS(0.001)S(0.001)EQAES(0.998)DNMDVPPEDDSKEGAGEQK 173.25 4.573899999999999e-49 131084000.0 16563.7 17183.8 16976.4 15933.099999999999 20522.0 16740.6 18461.4 18502.1 17963.100000000002 18854.8 20202.5 True False 18245.234630448533 18631.939132551346 18128.52059138624 16917.251400304438 19080.605517056574 16604.270103928247 19163.95867946571 18133.061100883348 17208.173375362923 17664.304710219712 17717.720574199047 1.0297732461712745 1.0515991069236978 1.023185827740472 0.9548209844182626 1.0769221377631495 0.9371561107080426 1.0816266460016708 1.0234420971334839 0.971240815278567 0.996985172908917 1.0 14.112905389321181 -8.747063228908972 24.630864725763615 0.9864192746863252 1.0220296492319194 0.10573686543073746 0.04237239478991907 284.4892647609452 487419.4034919227 0.006641427779625031 0.007512342568515652 1.790345178806935e-09 8.747063228908972 0.03561037454559424 GSSFRFS(ph)GR ddPTM_A549_MK2206_60min_R1 1 GSSFRFSGR 9 1 A0A1B0GV68;C9JME2;Q9Y4F1;Q9Y4F1-2 A0A1B0GV68;C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 GSSFRFS(1)GR 71.555 0.0012687000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GSSFRFS(ph)GR ddPTM_A549_PD325901_60min_R1 2 GSSFRFSGR 9 1 A0A1B0GV68;C9JME2;Q9Y4F1;Q9Y4F1-2 A0A1B0GV68;C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 GS(0.001)S(0.027)FRFS(0.972)GR;GSSFRFS(1)GR 99.75200000000001 0.00022228 33476000.0 3970.6000000000004 4392.3 4383.1 4462.6 4721.9 5224.2 4787.3 4753.1 5029.4 4963.3 4931.0 True False 4373.692388998768 4762.454535778193 4680.563523721459 4738.244666700052 4390.25003367067 5181.6558472779925 4969.483321211081 4658.295691765186 4818.031808209622 4649.916390957924 4324.51826018441 1.0113710073251632 1.1012682220874952 1.0823317748048695 1.0956699409330277 1.015199790943525 1.1982041780202892 1.1491414817148136 1.0771825695948254 1.1141198899699332 1.0752449431811713 1.0 12.078323713977394 -10.764402799778786 0.9517240885942587 0.9984814300422118 1.096475327974005 0.07938500038079754 0.05474985564395194 0.5422406805202649 0.8500014728633326 0.03699359806597714 0.008824876166389384 1.7202723153654422e-11 10.764402799778786 0.09799389793179314 GSSFRYS(ph)GR ddPTM_A549_MK2206_60min_R1 2 GSSFRYSGR 9 1 H7C3M7;X6R7S7;Q6ZUT3-2;Q6ZUT3;O94887-3;O94887-2;O94887 H7C3M7;O94887-3 FARP2;FRMD7 FERM domain-containing protein 7;FERM, RhoGEF and pleckstrin domain-containing protein 2 1 GSSFRY(0.04)S(0.96)GR;GSS(0.001)FRY(0.039)S(0.96)GR 59.198 0.0027325 11487700.0 2733.7 3619.9 2907.7 2345.2 3907.4 2228.06 2660.6 2733.97 3754.8999999999996 4557.0 4509.2 True False 3195.0817274518568 3804.1374481569883 3320.0555827572202 2919.7741052800293 3332.626636101481 2463.8318303334704 3143.9965806357723 3121.518619931975 2904.421145343165 3527.57053502605 3389.4411924110786 0.9426573721372152 1.1223494470635484 0.9795288940816521 0.8614322950394806 0.9832377807773137 0.7269138747265959 0.9275855228511254 0.9209537627975434 0.8569026516365387 1.0407528364629077 1.0 11.72683172457511 -6.001920824576075 24.876543133791053 0.9152460248274832 1.0371123654573489 0.21662429267585748 0.08826555374201363 72.97569214518118 945166.52842233 0.011506744155460739 0.034994529885347216 9.95586904415304e-07 6.001920824576075 0.12186634062986568 GSSFRYS(ph)GR ddPTM_A549_PD325901_60min_R1 2 GSSFRYSGR 9 1 H7C3M7;X6R7S7;Q6ZUT3-2;Q6ZUT3;O94887-3;O94887-2;O94887 H7C3M7;O94887-3 FARP2;FRMD7 FERM domain-containing protein 7;FERM, RhoGEF and pleckstrin domain-containing protein 2 1 GS(0.002)S(0.003)FRY(0.047)S(0.948)GR;GS(0.001)S(0.004)FRY(0.09)S(0.905)GR 45.257 0.020696 11199000.0 2762.8 2435.8 2473.9 2389.1 2710.0 2747.6 2199.3 2629.7 2703.6 2744.3 2987.3 True False 3043.2774221341356 2641.0734144408448 2641.7937307692087 2536.6692809602237 2519.658948992464 2725.2244565638757 2282.9955650031384 2577.2485705402596 2589.977094022259 2571.0244296548317 2619.8810380549357 1.1616090112219521 1.0080890605634685 1.008364002943638 0.9682383452202508 0.9617455572956553 1.040209237358025 0.8714119197939195 0.9837273269681254 0.9885857626364294 0.9813515928050014 1.0 11.355285588903943 -5.07462522403422 1.888349166711168 0.9850231596058798 1.2909843264086889 0.6298683031424037 0.04000180665923612 0.7230094363027116 1.7322657848952927 0.005317474610194611 0.4556498060928918 8.42121539950249e-06 5.07462522403422 0.30596116680280905 GSSGCSEAGGAGHEEGRAS(ph)PLRR ddPTM_A549_MK2206_60min_R1 1 GSSGCSEAGGAGHEEGRASPLRR 23 2 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 GSSGCS(0.001)EAGGAGHEEGRAS(0.999)PLRR 46.678000000000004 0.0026837 2578100.0 176.98 224.95 0.0 0.0 168.73 116.77 250.66 0.0 198.56 265.02 204.69 True False 206.84989725442787 236.3989941608649 0.0 0.0 143.9100405152794 129.12652389434726 296.2016774044059 0.0 153.58647703516445 205.1517979356162 153.85982384339212 1.3444048750827393 1.5364569401917825 0.0 0.0 0.9353321544275248 0.839247833962036 1.9251398448622818 0.0 0.9982234036059608 1.333368210173126 1.0 7.265472751468104 -6.970410932121455 24.97514128132842 0.9792183911179739 0.6946485758080099 0.04667872346143498 0.6101669540372783 573.2374329637313 483848.0620782517 0.0854290910869928 0.16144443009682494 1.0705059065697628e-07 6.970410932121455 -0.28456981530996406 GSSMGVRNS(ph)PQALR ddPTM_A549_MK2206_60min_R1 5 GSSMGVRNSPQALR 14 1 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 GS(0.052)S(0.054)MGVRNS(0.895)PQALR;GSSMGVRNS(1)PQALR;GS(0.012)S(0.012)MGVRNS(0.977)PQALR;GSSMGVRNS(1)PQALR;GS(0.004)S(0.004)MGVRNS(0.992)PQALR 107.98 4.509100000000001e-06 175040000.0 12188.500000000002 14201.2 13755.9 12457.3 16155.300000000001 12146.0 11522.5 11230.22 16792.9 21442.2 19884.399999999998 True False 14245.620819785265 14923.980421770508 15706.693465918086 15509.33905922945 13778.876770796505 13431.281658137726 13615.989100344168 12822.138076106345 12989.334962750874 16598.39212774535 14946.554698478398 0.9531039833036244 0.9984896668721797 1.0508571227800794 1.037653116193282 0.9218764490387363 0.8986205804007174 0.910978441187541 0.8578657981569274 0.8690521143359697 1.1105162669651965 1.0 13.867525349441191 -6.770784567908512 24.810169714461793 0.9245851217593941 1.0121184615868581 0.17674664226661863 0.07037624407432184 157.29813571036235 417605.6077411866 0.008492409024430197 0.016207103118092446 1.6951784864314574e-07 6.770784567908512 0.08753333982746403 GSSMGVRNS(ph)PQALR ddPTM_A549_PD325901_60min_R1 5 GSSMGVRNSPQALR 14 1 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 GS(0.006)S(0.01)MGVRNS(0.984)PQALR;GS(0.028)S(0.028)MGVRNS(0.945)PQALR;GSS(0.002)MGVRNS(0.998)PQALR;GSSMGVRNS(0.999)PQALR;GS(0.023)S(0.019)MGVRNS(0.958)PQALR 106.93 5.1043e-06 302431000.0 15534.8 13791.6 14594.4 15319.8 17704.4 15644.9 15415.5 17154.4 17386.3 17120.4 18733.0 True False 17111.881459884688 14953.866533624408 15584.863747256617 16266.069252209814 16460.904020864265 15517.493121450063 16002.145288185266 16812.24203463353 16655.614273486888 16039.415022214254 16428.959758271045 1.041568164488919 0.9102138390774248 0.948621457266065 0.9900851600796439 1.00194438741486 0.9445207334954905 0.9740206028643473 1.0233296740634796 1.0137960356925055 0.9762891417479627 1.0 14.003953514792114 -8.183495388108879 6.972466268405733 1.0079339030736179 0.9701550730512937 0.14964440425215786 0.03379896945654742 0.28144198671543585 21.710211671023018 0.004919413265271492 0.006359039579202732 6.553972456379762e-09 8.183495388108879 -0.037778830022324184 GSSMGVRNS(ph)PQALRR ddPTM_A549_MK2206_60min_R1 1 GSSMGVRNSPQALRR 15 2 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 GS(0.008)S(0.038)MGVRNS(0.953)PQALRR 40.085 0.041984 12633000.0 527.23 667.36 373.97 446.49 539.58 500.5 307.81 308.16 1096.7 849.75 906.9 True False 616.2135344640751 701.3257734749715 427.00456934474585 555.8800700436975 460.20849677730365 553.4625777949881 363.73509264282364 351.8426237004201 848.2992010700281 657.7908848229939 681.6917008333204 0.9039475377370697 1.0288019827990422 0.6263895670473363 0.8154420383351786 0.6750976962382422 0.8118957251766727 0.5335771173364483 0.5161315933145689 1.2444030051019275 0.9649389658387958 1.0 9.412975609022247 -8.77051861173619 24.998923769718555 1.115412538885269 0.7408351230392983 0.4505647326026849 0.1605712249919843 114.7161708375335 315860.67302595265 0.029628080450315283 0.03176060989937152 1.6962169091465e-09 8.77051861173619 -0.3745774158459706 GSSMGVRNS(ph)PQALRR ddPTM_A549_PD325901_60min_R1 3 GSSMGVRNSPQALRR 15 2 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 GS(0.005)S(0.049)MGVRNS(0.947)PQALRR;GSSMGVRNS(1)PQALRR;GSS(0.001)MGVRNS(0.999)PQALRR 85.176 5.0438e-05 98414000.0 4680.5 5388.3 4920.6 5418.4 5415.1 7228.9 5857.2 7116.6 7177.5 6269.8 7711.5 True False 5155.660914398011 5842.390951240494 5254.541505971536 5753.08226192076 5034.762057080846 7170.03023513416 6080.098951182823 6974.653830135301 6875.8546354286 5873.9237579892415 6763.034387226138 0.7623295431021175 0.8638712472430224 0.7769502866784459 0.8506658302354706 0.7444531210118327 1.0601794733850156 0.8990193754842903 1.031290605783236 1.0166818977610927 0.8685337707410998 1.0 12.723454973947758 -7.26220106710716 24.999936012728263 1.0042094282598828 0.8047943002498766 0.6499033149180127 0.06419150905458156 20.428098462577246 670488.3619380979 0.006584072624103709 0.01090779594707092 5.467627672739675e-08 7.26220106710716 -0.19941512801000616 GSSNSYAIK ddPTM_A549_MK2206_60min_R1 2 GSSNSYAIK 9 0 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 0 ; 119.68 0.00041388 8399900.0 5205.9 5037.1 4208.6 3552.1 5495.7 4378.7 4694.3 4739.9 7260.6 6785.9 7382.0 False True 6084.528647964888 5293.466874806368 4805.44276424392 4422.364659459828 4687.289810109771 4842.05112765418 5547.193545996579 5411.79534033496 5616.085692795704 5252.960476987771 5548.8456671645945 1.096539535055049 0.9539762307916697 0.8660256659651255 0.7969882250698122 0.8447324166622442 0.8726231396751787 0.999702258583656 0.9753011103479355 1.0121178402976683 0.9466762624291877 1.0 12.437971961806355 -7.771472935672262 23.970128451782266 1.0026916619947266 0.897926283348105 0.21303716472289091 0.07462500395013127 114.7172117283949 274058.7342580518 0.01172755500243445 0.016314973076341024 1.6924937138338682e-08 7.771472935672262 -0.10476537864662161 GSSNSYAIK ddPTM_A549_PD325901_60min_R1 2 GSSNSYAIK 9 0 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 0 ; 119.68 0.00041388 14397400.0 8024.8 8175.1 7806.200000000001 8144.2 9990.7 9522.9 8777.7 9969.8 10391.3 10248.7 10931.099999999999 False True 8839.47178845447 8864.04436751595 8335.975674493955 8647.248737179805 9288.987698043917 9445.348659707437 9111.74017684174 9770.944517843205 9954.589797719147 9601.595332945919 9586.643997952095 0.9220611290398145 0.9246243387581193 0.8695405478992119 0.9020099983922462 0.9689509384126747 0.9852612302830019 0.9504619321201659 1.0192247172139157 1.038381085168663 1.0015596005230838 1.0 13.22681014319235 -7.3226374252407584 0.9291597948522589 1.0175110036499648 0.9022186041712662 0.7550657051801462 0.024960368919652996 0.195805263555328 0.334324627355136 0.004796742259207912 0.01092760457085523 4.7573222964429374e-08 7.3226374252407584 -0.11529239947869863 GSSPSIRPIQGSQGS(ph)SSPVEKEVVEATDSR ddPTM_A549_MK2206_60min_R1 1 GSSPSIRPIQGSQGSSSPVEKEVVEATDSR 30 2 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GS(0.001)S(0.001)PS(0.005)IRPIQGS(0.085)QGS(0.337)S(0.284)S(0.284)PVEKEVVEAT(0.001)DSR 74.767 2.8472000000000005e-06 14159000.0 2479.3 2199.2 2437.5 2058.3 2799.5 2348.3 2259.7 1956.3 3647.1 3845.5 4072.2 True False 2897.7452269347 2311.129886457319 2783.1741524128092 2562.5835924005974 2387.6972584752243 2596.795547324618 2670.2582399694256 2233.6115159174824 2821.0376732219393 2976.798879184259 3060.960352997513 0.9466784579868927 0.7550342441365155 0.9092486773594844 0.837182876247035 0.7800484106685731 0.8483597459149214 0.8723596296680277 0.7297093912798214 0.9216184948163003 0.9725048794797891 1.0 11.579768643181254 -9.072434100114656 2.9821709188105516 0.9699268634494529 0.8343622467712158 0.46381379981341875 0.06245866680570095 0.13966585061808626 2.5780919696532085 0.01123081745792561 0.011074289228096546 8.463809889942889e-10 9.072434100114656 -0.13556461667823705 GSSPSIRPIQGSQGSS(ph)SPVEK ddPTM_A549_PD325901_60min_R1 2 GSSPSIRPIQGSQGSSSPVEK 21 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GSSPSIRPIQGSQGS(0.115)S(0.539)S(0.346)PVEK;GSSPSIRPIQGS(0.002)QGS(0.079)S(0.525)S(0.394)PVEK 143.29 4.0431000000000003e-22 13524000.0 4508.0 4384.5 4747.6 4360.3 4830.6 4031.0 4601.2 4741.7 4634.0 5019.7 5748.9 True False 4965.6488413858015 4753.99720240409 5069.800685638024 4629.625828040211 4491.315320665312 3998.1728724737904 4776.301183873252 4647.123073708309 4439.249095169084 4702.75528533264 5041.821745279689 0.9848917895668956 0.9429125904450967 1.0055493711939598 0.9182446468629343 0.8908120016083912 0.7930016320424269 0.9473363845806279 0.921715068181276 0.8804851340341907 0.9327492170336061 1.0 12.299729396958687 -6.2811712018692045 23.8307239547791 0.9252665465337833 0.9742973876286402 0.2184979789644248 0.051301701688241524 762.2750658897015 920622.2149920756 0.008932856130650172 0.020789556250952336 5.233940703736681e-07 6.2811712018692045 0.04903084109485689 GSSPSIRPIQGSQGSS(ph)SPVEKEVVEATDSR ddPTM_A549_MK2206_60min_R1 1 GSSPSIRPIQGSQGSSSPVEKEVVEATDSR 30 2 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GSSPS(0.001)IRPIQGS(0.003)QGS(0.101)S(0.447)S(0.447)PVEKEVVEATDSR 73.337 3.3084e-06 14745000.0 3357.1 3264.8 3063.3 3173.0 4261.8 2868.1 2292.5 2729.4 5027.0 4805.3 5556.8 True False 3923.696406785173 3430.9643749117226 3497.7220024968847 3950.385142441381 3634.8948655723234 3171.600438309304 2709.01757539935 3116.300808436935 3888.3925264694367 3719.7793925742085 4176.893200121945 0.9393815495858551 0.8214153942963051 0.837397997725862 0.9457711636787959 0.8702388812493943 0.7593204533495636 0.6485723827748959 0.7460810365814368 0.9309293630864 0.8905612890618342 1.0 12.028214540055474 -8.93866685668839 4.857841989633897 0.9706102136312927 0.8196812170818246 0.27280002819521465 0.0847680515378461 0.16147861669696145 7.186184129959409 0.015986561511364312 0.016710949855587926 1.1516834960304347e-09 8.93866685668839 -0.15092899654946812 GSSPSIRPIQGSQGSS(ph)SPVEKEVVEATDSR ddPTM_A549_PD325901_60min_R1 1 GSSPSIRPIQGSQGSSSPVEKEVVEATDSR 30 2 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GS(0.003)S(0.003)PS(0.003)IRPIQGS(0.009)QGS(0.2)S(0.39)S(0.39)PVEKEVVEATDSR 58.95 0.00040592 24152000.0 7053.6 7173.3 4444.1 5197.4 6438.4 5798.9 5651.4 6045.4 6650.0 6646.7 8333.2 True False 7769.676279414128 7777.819165698541 4745.703350544263 5518.431593848171 5986.188995274198 5751.675681019171 5866.46711956474 5924.8197544754485 6370.523625997933 6227.026227667078 7308.269228507141 1.0631349279125064 1.0642491296516337 0.6493607723197777 0.7550941845878631 0.8190980392353437 0.7870092769138535 0.80271633900426 0.8107008060629028 0.8716870474815881 0.8520521115146537 1.0 12.835314066886609 -10.08072652228132 0.8081059828930857 0.9913410351347094 0.8394155505672869 0.012278900942155668 0.12385815596690404 0.740890279739906 0.9643287713143252 0.057903952264035496 0.02481308169919989 8.303734938526686e-11 10.08072652228132 -0.1519254845674225 GSSS(ph)LDRLYSR ddPTM_A549_MK2206_60min_R1 2 GSSSLDRLYSR 11 1 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 GS(0.064)S(0.423)S(0.513)LDRLYSR;GS(0.024)S(0.125)S(0.85)LDRLYSR 76.58800000000001 0.00033939 15158000.0 2288.5299999999997 2827.4 2643.3999999999996 2370.4 4159.799999999999 3698.3999999999996 3533.7 3631.4 5987.5 5093.2 5915.5 True False 2674.777914813403 2971.302583198176 3018.273868507906 2951.1481064113 3547.8989304537376 4089.7622332007677 4175.727549046315 4146.162070696082 4631.340810072759 3942.642582618974 4446.518090505572 0.6015443680583967 0.6682313042968722 0.6787949148239553 0.6636986618164759 0.7979049805350817 0.9197673662755207 0.9391005420539135 0.9324514117122732 1.041565718570184 0.8866808820675893 1.0 12.118460339877346 -7.176910045784312 0.8520919137460553 1.016871171062676 0.6260255294703707 0.8840202167787146 0.05001372263274952 0.08044328043892572 0.11370996136078518 0.005924022118625757 0.01568195031243005 6.654109666634914e-08 7.176910045784312 -0.3908456415923054 GSSSANPVNS(ph)VR ddPTM_A549_MK2206_60min_R1 1 GSSSANPVNSVR 12 0 Q99661-2;Q99661;Q5JR89 Q99661-2 KIF2C Kinesin-like protein KIF2C 1 GSSSANPVNS(1)VR 61.211999999999996 0.006451899999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GSSSANPVNS(ph)VR ddPTM_A549_PD325901_60min_R1 1 GSSSANPVNSVR 12 0 Q99661-2;Q99661;Q5JR89 Q99661-2 KIF2C Kinesin-like protein KIF2C 1 GSSSANPVNS(1)VR 85.45700000000001 0.0003945 3542100.0 2130.9 2397.3 2087.8 2040.1 2925.2 2511.0 2166.8 2353.1 2701.9 3000.4 3025.7 True False 2347.2273993143317 2599.328884325083 2229.490662961299 2166.1123435967324 2719.74404339216 2490.5512485193954 2249.2587597184556 2306.1655745287594 2588.3485391103486 2810.954231948534 2653.5580814925916 0.8845585162372053 0.9795635914111949 0.8401891326634313 0.8163048544911905 1.0249423452839366 0.9385704672868864 0.8476387893696592 0.8690842648643181 0.9754256208533549 1.0593151329732378 1.0 11.373712411690972 -8.870976382698112 5.703799845828869 0.9892631576737795 0.9018043248508321 0.374052617458722 0.06256040551800586 0.18854111687517336 8.774068943115658 0.010418546055574527 0.011041065803492733 1.3459335450723776e-09 8.870976382698112 -0.08745883282294742 GSSSAS(ph)IVK ddPTM_A549_MK2206_60min_R1 2 GSSSASIVK 9 0 Q14126 Q14126 DSG2 Desmoglein-2 1 GSS(0.057)S(0.057)AS(0.886)IVK;GS(0.001)S(0.027)S(0.027)AS(0.945)IVK 138.23 4.3043e-05 45399000.0 18910.9 26284.0 20509.0 16565.0 28530.0 22357.0 19158.1 20585.7 29897.0 29461.0 30529.0 True False 22102.597592884857 27621.74333195899 23417.48459152176 20623.425743631098 24333.27479346246 24722.802900624476 22638.87878353686 23503.78601606223 23125.377235698583 22805.73963844688 22947.806742463803 0.9631681947183681 1.20367683247246 1.0204672217405788 0.898710102236849 1.0603747480771186 1.0773492725505713 0.9865378002179491 1.0242279918006114 1.0077380158909128 0.9938091206008793 1.0 14.486068652884533 -5.972556376326991 24.985688691323613 1.0060094840415892 1.0905849405416517 0.16058383118854413 0.06706978652939273 225.2743361514798 205095.5123594468 0.008136419802985862 0.025296346556833237 1.0652305757367711e-06 5.972556376326991 0.08457545650006248 GSSSAS(ph)IVK ddPTM_A549_PD325901_60min_R1 2 GSSSASIVK 9 0 Q14126 Q14126 DSG2 Desmoglein-2 1 GS(0.001)S(0.036)S(0.036)AS(0.926)IVK;GSSS(0.014)AS(0.986)IVK 129.88 4.998e-05 95090000.0 19255.8 22653.0 20945.6 19407.8 25931.0 21810.0 22397.0 23841.0 22837.0 25299.0 25956.0 True False 21210.634640629254 24562.04781071042 22367.09437212481 20606.57572768818 24109.69601709356 21632.38659108244 23249.330091108674 23365.4725520973 21877.240307806736 23701.616822445638 22763.576548640543 0.9317795292539813 1.0790065330123741 0.9825826062232119 0.9052433251715368 1.0591347965719125 0.9503070198507246 1.0213390695188072 1.0264411878410513 0.961063401485267 1.0412079477845109 1.0 14.47443962715941 -5.903578214803665 18.629917724914556 0.9849346739730676 1.011736812681942 0.0 0.053080619389429824 6.220221951194348 1189.0808722222346 0.006259340159258564 0.0194614692678927 1.2485955569739928e-06 5.903578214803665 0.02680213870887438 GSSSQGPSQTS(ph)TPTDVTAIHL ddPTM_A549_MK2206_60min_R1 1 GSSSQGPSQTSTPTDVTAIHL 21 0 Q5T8J1;P30281-4;P30281-2;P30281-3;P30281 Q5T8J1 CCND3 G1/S-specific cyclin-D3 1 GSSSQGPS(0.01)QT(0.05)S(0.448)T(0.448)PT(0.037)DVT(0.006)AIHL 72.819 4.9279e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GSST(ph)PTKGIENK ddPTM_A549_MK2206_60min_R1 3 GSSTPTKGIENK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GS(0.012)S(0.203)T(0.763)PT(0.021)KGIENK;GS(0.023)S(0.131)T(0.797)PT(0.049)KGIENK;GS(0.002)S(0.161)T(0.834)PT(0.003)KGIENK 85.845 0.00139 189295700.0 5853.799999999999 6418.9 6804.9 5412.97 7867.1 5730.300000000001 6463.4 4882.7 9561.5 8973.4 10378.300000000001 True False 6841.778328330713 6745.594592661375 7769.9371445144325 6739.147892997456 6709.860011484351 6336.676542534714 7637.716116395269 5574.837677641619 7395.835516577982 6946.302707703038 7801.081683491508 0.8770294435974368 0.8646999052626595 0.9960076640342092 0.8638735199066953 0.860119183943891 0.8122817834280932 0.9790586006243276 0.714623677052245 0.9480525671496173 0.8904281469584743 1.0 12.929458463920724 -8.981504751657184 22.239081037762737 0.9770824572541278 0.8731812163341603 0.13920146795840038 0.07599268245774475 30.056277599707542 36141.818513397666 0.01202650065634621 0.012236532655840517 1.0435067155600592e-09 8.981504751657184 -0.10390124091996744 GSST(ph)PVKN ddPTM_A549_MK2206_60min_R1 1 GSSTPVKN 8 1 O00399 O00399 DCTN6 Dynactin subunit 6 1 GS(0.002)S(0.192)T(0.806)PVKN 76.064 0.014533 3155200.0 1031.5 989.5 785.93 699.49 921.17 903.78 845.53 820.75 921.73 1050.3 923.03 True False 1205.5919822462558 1039.8613235037817 897.3866919408406 870.865081401299 785.6671132665201 999.4173997193894 999.1518562824041 937.0938259414585 712.9596267003534 813.0365005349697 693.8161766679674 1.737624493040905 1.4987562390051012 1.2934069889383595 1.2551812867546617 1.132385118259514 1.4404642516683068 1.4400815228621544 1.3506370382452382 1.0275915302585217 1.171832724396186 1.0 9.43840966794094 -2.000000002200714 0.1266748314641484 0.8466766082934779 3.3283541438327373 0.46187759673180007 0.1537962585092346 38.943311646289125 0.3227695281184567 0.48187582088599085 17.30860837978682 0.009999999949326691 2.000000002200714 2.4816775355392595 GSST(ph)PVKN ddPTM_A549_PD325901_60min_R1 2 GSSTPVKN 8 1 O00399 O00399 DCTN6 Dynactin subunit 6 1 GS(0.001)S(0.026)T(0.973)PVKN;GS(0.002)S(0.108)T(0.889)PVKN 76.679 0.014180000000000002 15289400.0 4923.1 4791.799999999999 4541.8 4920.7 4760.200000000001 4499.3 3735.1 3910.1 4567.799999999999 5469.3 5793.9 True False 5422.88948780533 5195.621802823563 4850.033860062088 5224.640463279471 4425.859973798499 4462.659192538158 3877.2412744251433 3832.109988085889 4375.831250952384 5123.967464603423 5081.2870305581955 1.0672275459333003 1.022501144213616 0.9544892526036453 1.028212032081472 0.8710116053633569 0.8782537112547096 0.7630431524745446 0.754161291231942 0.8611659260019572 1.0083995322028756 1.0 12.310978245720946 -6.757630135130923 24.993027983979076 0.8979971924464963 1.0138771831215425 0.4031593930432439 0.08012617095733739 108.56573354805329 712305.9713006573 0.013582553641840566 0.02744497718052887 1.7473096075129376e-07 6.757630135130923 0.11587999067504617 GST(ph)PYKGDDEGIFISR ddPTM_A549_MK2206_60min_R1 1 GSTPYKGDDEGIFISR 16 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YDF9;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 GS(0.158)T(0.842)PYKGDDEGIFISR 125.79 8.050699999999999e-09 16850000.0 3310.9 3858.0 3511.1 3852.2 5547.2 4838.5 3889.5 3696.0 6733.4 5899.8 6202.6 True False 3869.6989762667263 4054.3557211496623 4009.0267760150227 4795.989172931828 4731.214228331407 5350.506858463641 4596.17180349652 4219.919318525288 5208.2956510302965 4567.031082410945 4662.323236948671 0.8299937133486501 0.8695998786654477 0.8598774843073282 1.0286693841653578 1.0147761079362276 1.1476053003063258 0.9858114870869731 0.9051108436846774 1.117103080660479 0.9795612295212521 1.0 12.186833314048899 -6.272673086668408 3.870794406455132 1.0437555135552272 0.8514919211287416 0.5595956122032998 0.06498187991200645 0.11551873786782094 3.9558740412741495 0.00971935299445743 0.02544873724806627 5.337365122096854e-07 6.272673086668408 -0.1922635924264856 GSTAENAEY(ph)LR ddPTM_A549_MK2206_60min_R1 2 GSTAENAEYLR 11 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GSTAENAEY(1)LR;GSTAENAEY(1)LR 129.89 1.0437000000000001e-07 5794100.0 1711.6599999999999 2632.9 1513.95 1362.89 2154.43 1873.43 1661.4700000000003 1787.3200000000002 2304.9700000000003 2685.9 2907.8 True False 2000.546361930806 2766.9033639748445 1728.650875095536 1696.7981111824574 1837.5162009561639 2071.6751191178137 1963.337592583973 2040.678083437937 1782.8979752807356 2079.1533245614364 2185.7130088026547 0.9152831839650879 1.2659042394090745 0.7908864833276992 0.7763133148537065 0.8406941778521806 0.9478257716243764 0.8982595540571449 0.9336441130282842 0.815705432552381 0.9512471748065441 1.0 11.093888267575634 -5.7748184491373715 24.999722799824983 0.8940384193229926 1.0905937972574902 0.3772386445225584 0.1017702785865161 165.0958403688848 308494.94861794345 0.01449987102407373 0.04545570175444221 1.6795059658689564e-06 5.7748184491373715 0.19655537793449762 GSTAENAEY(ph)LR ddPTM_A549_PD325901_60min_R1 2 GSTAENAEYLR 11 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GSTAENAEY(1)LR;GSTAENAEY(1)LR 146.11 2.113e-11 12438400.0 5332.9 4624.4 2305.18 2275.6000000000004 4397.4 3203.9 2451.3 2377.2 2370.8900000000003 2388.1 2790.6000000000004 True False 5874.292082126514 5014.114417333214 2461.623376973428 2416.1586437374276 4088.541794206444 3177.8085006496603 2544.58556290283 2329.784881122677 2271.249738292066 2237.314958444304 2447.3738910709008 2.4002430129529952 2.0487733548302183 1.0058223575705028 0.9872454113172654 1.6705832358199324 1.29845648523248 1.0397208093894441 0.9519529850435846 0.9280354532581174 0.9141696602251972 1.0 11.25701880683468 -2.0000000000105547 0.5143247787487703 0.990535310304765 54.00161954020753 0.7407259867854952 0.25033359644476916 35.251507841544395 0.322779788092744 0.04629654057292379 2045.739702525122 0.009999999999756969 2.0000000000105547 53.011084229902764 up GSTDSLDS(ph)LSSR ddPTM_A549_MK2206_60min_R1 1 GSTDSLDSLSSR 12 0 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 GSTDSLDS(0.997)LS(0.003)SR 146.36 6.7896e-12 3055700.0 875.94 1153.3 817.66 774.88 1224.5 1098.3 738.19 982.11 1649.3 1052.2 915.87 True False 1023.7772573231078 1211.9980438574146 933.6164830612745 964.7256347856849 1044.377672085342 1214.5213770074647 872.3095677138697 1121.3271000857335 1275.7361833908983 814.5072892153624 688.4342022739146 1.487109812298034 1.76051398936043 1.3561448283329285 1.4013330999522875 1.517033390606884 1.7641793115389555 1.2670921416057053 1.6288079476324147 1.8530982033970875 1.1831301909827046 1.0 9.427174963830966 -10.986708452275725 1.263150954240389 1.0003298749271798 1.583414887036734 0.4869903643688185 0.18161672932177678 0.26710153095884376 0.7589863844847169 0.1332513040868196 0.030636739611718856 1.0310780647263511e-11 10.986708452275725 0.5830850121095541 GSTDSLDS(ph)LSSR ddPTM_A549_PD325901_60min_R1 1 GSTDSLDSLSSR 12 0 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 GSTDS(0.042)LDS(0.958)LSSR 127.56 9.315200000000001e-08 4971000.0 1442.8 1138.4 1214.9 1028.3 1437.9 1137.1 923.45 1254.1 1406.6 1461.7 1343.2 True False 1589.2719938667783 1234.336963215148 1297.3504197871832 1091.8157555612565 1336.9068644857055 1127.8398346043034 958.5923950812291 1229.0859916775823 1347.4854935832618 1369.4080125447172 1177.9949152463396 1.3491331526965322 1.0478287700902564 1.1013208996032757 0.926842502824334 1.1349003694180926 0.9574233470850357 0.8137491789434171 1.043371219832947 1.1438805687047289 1.1624905972181974 1.0 10.202117596525943 -5.259103738837302 5.570776333638842 1.0409704454082145 1.3602948120802234 0.4479190776571861 0.1005222917211047 0.10921264806184638 13.295806628110444 0.013824250600135129 0.13154979334601763 5.506761420604514e-06 5.259103738837302 0.3193243666720089 GSTIETEQKEDKGEDS(ph)EPVTSK ddPTM_A549_MK2206_60min_R1 2 GSTIETEQKEDKGEDSEPVTSK 22 2 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 GSTIETEQKEDKGEDS(1)EPVTSK;GSTIETEQKEDKGEDS(1)EPVTSK 141.5 1.9922999999999996e-27 23034000.0 9487.2 10474.400000000001 10338.4 8894.3 14475.9 11095.5 9799.8 9369.8 15279.4 14489.9 14516.3 True False 11088.40742022945 11007.502220220334 11804.540577355729 11073.403899280294 12346.514286108773 12269.618445403186 11580.296809334146 10697.99784380904 11818.640296188012 11216.621526327392 10911.502080501403 1.0162127394031453 1.0087980682229334 1.0818437727698522 1.0148377205617003 1.131513717819997 1.124466490028784 1.0612926363298656 0.9804331030579292 1.0831359613913876 1.0279631020161037 1.0 13.413562096694525 -5.727051790534227 24.956398451684084 1.0498692277333308 1.0125053261778396 0.10505403220951604 0.04625326234802603 391.5110424006458 284129.35099718766 0.006976212575600838 0.027016161401236534 1.8747709243438945e-06 5.727051790534227 -0.037363901555491186 GSTIYTGYPLS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 GSTIYTGYPLSPTK 14 0 H3BLW0;Q5SQL3;J3KP92;Q86Z02-4;Q86Z02-3;Q86Z02 H3BLW0 HIPK1 Homeodomain-interacting protein kinase 1 1 GSTIYT(0.002)GY(0.002)PLS(0.976)PT(0.021)K 86.46700000000001 0.00010442 1761800.0 1521.4 1333.4 1534.3 1433.3 1628.4 1402.6 1432.6 1617.5 2142.3 1938.1 2390.2 True False 1778.1751253412062 1401.2643645881185 1751.8868110961937 1784.4585643432815 1388.8645171284354 1551.0222010294729 1692.884876125237 1846.7855783859982 1657.0724705501236 1500.281863931092 1796.6473738359257 0.9897184896915635 0.7799328822084625 0.9750866177795556 0.993215803128568 0.7730312232406212 0.8632869329934055 0.9422465981796133 1.0279065359626052 0.9223136908675612 0.8350452547223668 1.0 10.811091564996257 -7.951227893919902 6.674435737581851 0.9679657111758662 0.8933516053286503 0.0582035905428524 0.08451278402668845 0.2667859705383113 27.602491601688975 0.01158406619280034 0.016009307721595895 1.1188506179710255e-08 7.951227893919902 -0.07461410584721584 GSTIYTGYPLS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 GSTIYTGYPLSPTK 14 0 H3BLW0;Q5SQL3;J3KP92;Q86Z02-4;Q86Z02-3;Q86Z02 H3BLW0 HIPK1 Homeodomain-interacting protein kinase 1 1 GSTIYT(0.003)GY(0.002)PLS(0.984)PT(0.011)K 112.15 7.6601e-06 3501500.0 3150.4 3492.6 4385.3 4039.2 4672.1 4319.1 3177.5 4267.7 4639.5 5359.9 5012.4 True False 3470.2262887980974 3786.933659280767 4682.912828951137 4288.69221031122 4343.947813869994 4283.926681593041 3298.421501294715 4182.577375554117 4444.517949295853 5021.474999273744 4395.906576221522 0.7894222110108882 0.8614681849166607 1.0652894341026486 0.9756104084444721 0.9881801941304701 0.974526325187572 0.7503393086506073 0.9514709430311025 1.0110583271576519 1.1423070331922127 1.0 12.10194501047286 -5.579213097608605 5.815983811352796 0.9824509431249023 0.8057291268015843 0.328507746148089 0.08989594054894115 0.12879025199738656 8.890197945500212 0.010844622115349502 0.044503899441422044 2.6350381202416733e-06 5.579213097608605 -0.17672181632331807 GSVFLESDS(ph)SPPSSSDAGLR ddPTM_A549_PD325901_60min_R1 1 GSVFLESDSSPPSSSDAGLR 20 0 Q8TBP0 Q8TBP0 TBC1D16 TBC1 domain family member 16 1 GSVFLESDS(0.499)S(0.499)PPS(0.001)SSDAGLR 167.05 3.5853e-28 7442900.0 4649.4 5378.3 4652.8 4852.4 5509.0 4816.6 5622.3 5153.4 4902.8 5560.2 5763.1 True False 5121.403665292622 5831.548216145493 4968.566987559312 5152.1217274000255 5122.066845018258 4777.375206538639 5836.259703140607 5050.61139423591 4696.752365946266 5209.12802309033 5054.275235300906 1.0132815145330563 1.1537852500425438 0.983042425718533 1.0193591538932671 1.013412726169693 0.9452146913511364 1.1547174285994626 0.9992751006040576 0.9292632765905643 1.0306379808341017 1.0 12.30328851439626 -8.51914626392682 24.89448504409225 0.9664740504977594 1.0399016542505695 0.1037426713466223 0.0652329104430973 166.84218973643235 1112789.4148547105 0.010429213052252256 0.011954965347863953 3.0258941802895022e-09 8.51914626392682 0.0734276037528101 GSVFLESDSS(ph)PPSSSDAGLR ddPTM_A549_PD325901_60min_R1 1 GSVFLESDSSPPSSSDAGLR 20 0 Q8TBP0 Q8TBP0 TBC1D16 TBC1 domain family member 16 1 GSVFLESDS(0.176)S(0.818)PPS(0.004)S(0.001)SDAGLR 160.43 6.4315e-27 6105800.0 3050.0 2732.2 2201.1 3052.6 3172.4 3134.1 2656.3 3058.3 3374.3 2710.7 3271.3 True False 3359.6337547086696 2962.452082656733 2350.479882289545 3241.152169042393 2949.5815681858626 3108.576928707544 2757.3869500831324 2997.299807310065 3232.489905444333 2539.545939389045 2868.950838479267 1.1710321800039964 1.0325907446455331 0.8192820353573762 1.129734300626921 1.0281046048698887 1.0835239443682119 0.961113349556289 1.0447372492791933 1.1267149865690154 0.8851828010880701 1.0 11.486307531371022 -8.52225888336046 24.560612533739974 1.0612001797311892 1.0276867742258795 0.0 0.10487565868629208 66.78588525866438 2646320.751793964 0.015757204004205556 0.01797194222093328 3.0042849116165095e-09 8.52225888336046 -0.03351340550530968 GSVIS(ph)PTELEAPILVPHTAQR ddPTM_A549_MK2206_60min_R1 2 GSVISPTELEAPILVPHTAQR 21 0 Q8N1B4-2;Q8N1B4 Q8N1B4-2 VPS52 Vacuolar protein sorting-associated protein 52 homolog 1 GS(0.049)VIS(0.774)PT(0.178)ELEAPILVPHTAQR;GS(0.151)VIS(0.673)PT(0.175)ELEAPILVPHTAQR 77.445 6.8926e-05 5536100.0 1710.1399999999999 1506.77 1262.8600000000001 1194.24 2508.8999999999996 1719.87 1857.44 1990.25 2077.2200000000003 2173.4 2592.19 True False 1998.769823091238 1583.4581570649766 1441.9525374835034 1486.8288536114708 2139.8441335197326 1901.86550184269 2194.912804907204 2272.3740323849975 1606.73298663872 1682.4274305081447 1948.477682195528 1.0258109915013456 0.8126642514482124 0.7400405714982189 0.7630720470640058 1.0982133144622805 0.9760776421620002 1.126475722541505 1.166230464505247 0.8246093867640645 0.863457377973352 1.0 10.928131691678285 -6.742567544977369 24.998952547986804 0.9656297129188357 0.8269620327248445 0.2741064980672139 0.12309995282188575 328.0607733560498 434569.90425235743 0.019502165989796295 0.040543935786071475 1.8089745420765697e-07 6.742567544977369 -0.13866768019399123 GSVIS(ph)PTELEAPILVPHTAQR ddPTM_A549_PD325901_60min_R1 2 GSVISPTELEAPILVPHTAQR 21 0 Q8N1B4-2;Q8N1B4 Q8N1B4-2 VPS52 Vacuolar protein sorting-associated protein 52 homolog 1 GS(0.027)VIS(0.827)PT(0.146)ELEAPILVPHTAQR;GS(0.027)VIS(0.827)PT(0.146)ELEAPILVPHTAQR 93.09299999999999 6.0003e-07 7409500.0 2471.3 2285.5 2375.7 2574.5 2738.8999999999996 2585.0 2317.5 2340.1 2812.0 2636.8999999999996 2894.7 True False 2722.184556725094 2478.1071059629485 2536.929288244637 2733.5210178862762 2546.5291126920515 2563.9486170540195 2405.693730684659 2293.424869727063 2693.82141899341 2470.40568398383 2538.6702510151717 1.0722875708794941 0.9761437528060192 0.9993142225659916 1.0767530823639608 1.0030956606805224 1.0099573255048542 0.9476196168930022 0.9033961259088142 1.0611151321902466 0.9731101087256039 1.0 11.309857299529341 GSVPLSS(ph)SPPATHFPDETEITNPVPK ddPTM_A549_MK2206_60min_R1 2 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GSVPLS(0.07)S(0.477)S(0.428)PPAT(0.024)HFPDET(0.001)EITNPVPK;GS(0.006)VPLS(0.078)S(0.436)S(0.395)PPAT(0.078)HFPDET(0.006)EIT(0.001)NPVPK 79.395 5.2723e-06 9040000.0 1663.1100000000001 2347.2 2025.16 1756.8 1760.19 1932.1799999999998 1895.66 2210.32 2676.4 2665.1 2331.1000000000004 True False 1943.8023088643445 2466.6624542982086 2312.358140102696 2187.21607886575 1501.2683827095927 2136.6420051227174 2240.07688417951 2523.6396288211063 2070.199673332566 2063.0520590076635 1752.223534912949 1.1093346654317786 1.4077327493610872 1.3196707463568993 1.2482517414505632 0.8567790312120058 1.2193889435624243 1.2784195849137467 1.4402498188945292 1.1814700762111463 1.177390908124149 1.0 10.774971119041219 -10.045663618873792 0.9513298409271488 1.0190829231141276 1.2311068962850102 0.07468496957721149 0.15639972792294046 0.5444354012981427 0.9924187781153581 0.06030079530566461 0.02990188181038264 9.00194553817591e-11 10.045663618873792 0.21202397317088262 GSVPLSS(ph)SPPATHFPDETEITNPVPK ddPTM_A549_PD325901_60min_R1 1 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GSVPLS(0.084)S(0.479)S(0.42)PPAT(0.016)HFPDETEITNPVPK 83.788 2.155e-06 9473400.0 1340.3 1276.4 1320.3 1354.7 1334.4 1525.6 1196.9 990.16 1523.5 1336.5 1687.2 True False 1476.3662693232895 1383.96670752619 1409.9034976088715 1438.3767422530725 1240.6763474300894 1513.1760194110677 1242.4486844688104 970.4104820345071 1459.4725931139624 1252.1131619114835 1479.6850960420068 0.9977570722800447 0.9353116492341156 0.9528402370073246 0.9720830101624802 0.8384732337635629 1.0226338181405257 0.839671013644878 0.6558222993731891 0.9863399969479245 0.8462024556851637 1.0 10.531074461382604 -8.958191848510399 24.99991503765471 0.9939741826703496 0.9014673155280947 0.0 0.1056260712007231 193.09373070704626 115464.29478432304 0.016737446603136034 0.01780220457550824 1.1010528147449147e-09 8.958191848510399 -0.09250686714225498 GSVPLSSS(ph)PPATHFPDETEITNPVPK ddPTM_A549_MK2206_60min_R1 5 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GSVPLS(0.023)S(0.179)S(0.784)PPAT(0.013)HFPDETEITNPVPK;GSVPLS(0.02)S(0.125)S(0.811)PPAT(0.045)HFPDETEITNPVPK;GSVPLS(0.006)S(0.138)S(0.829)PPAT(0.027)HFPDETEITNPVPK;GSVPLS(0.018)S(0.173)S(0.808)PPATHFPDETEITNPVPK;GSVPLS(0.011)S(0.097)S(0.892)PPATHFPDETEITNPVPK 328.04 3.0271999999999986e-211 1461008500.0 30769.25 36308.5 36090.8 32880.97 48276.7 39879.8 33506.95 44025.4 55121.7 53545.58 57403.3 True False 35962.34716406266 38156.44756385756 41209.01813329239 40936.80912608283 41175.2613817578 44099.85396593124 39594.72909401403 50266.13527213287 42636.722961267216 41449.5962889796 43148.4763595163 0.8334557833380192 0.884305792073287 0.9550515246456398 0.9487428660283228 0.954269185282059 1.0220489270232391 0.9176391018794687 1.1649573638084392 0.988139711029768 0.9606271133102938 1.0 15.397021996024838 -5.06449649547943 0.5814926696365416 1.0040604034359808 0.6775026556305513 0.4709183791879117 0.05865783560636852 2.625667124191227 0.5090822349004459 0.009520339349637648 0.6047736621200547 8.619925344892321e-06 5.06449649547943 -0.32655774780542945 GSVPLSSS(ph)PPATHFPDETEITNPVPK ddPTM_A549_PD325901_60min_R1 4 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GSVPLS(0.014)S(0.111)S(0.873)PPAT(0.001)HFPDETEITNPVPK;GSVPLS(0.033)S(0.157)S(0.781)PPAT(0.029)HFPDETEITNPVPK;GSVPLS(0.01)S(0.095)S(0.894)PPATHFPDETEITNPVPK;GS(0.065)VPLS(0.066)S(0.388)S(0.411)PPAT(0.062)HFPDET(0.004)EIT(0.005)NPVPK 319.77 3.811999999999999e-210 2278305700.0 23620.84 28289.2 27466.929999999997 30124.260000000002 35374.5 30392.870000000003 31737.899999999998 33266.1 30032.399999999998 31923.710000000003 36462.4 True False 26018.810288056648 30673.230164956032 29331.00104186778 31984.96712304168 32889.917155399955 30145.36054344395 32945.70315214529 32602.581538749397 28770.242668484254 29908.041502465552 31977.755954197528 0.8136534134954305 0.9592052115504917 0.9172313743303078 1.000225505781409 1.028524865925831 0.9426978111479066 1.0302693909896046 1.0195393818580272 0.8996954855022513 0.9352764323207521 1.0 14.964781080489542 -4.469561723571315 1.3591824319400088 0.9678928326301346 4.093508979051766e-14 0.517912479250936 0.04399963741510386 7.068450557884546 2.276681185901255 0.007329367102433371 15.875871132794458 3.391862796810773e-05 4.469561723571315 -0.9678928326300936 GSVS(ph)QPSTPSPPKPTGIFQTSANSSFEPVK ddPTM_A549_PD325901_60min_R1 1 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK 30 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GS(0.002)VS(0.548)QPS(0.15)T(0.15)PS(0.15)PPKPTGIFQTSANSSFEPVK 155.71 2.4042999999999998e-46 23997000.0 1429.5 979.11 1444.2 1264.3 1730.9 1327.6 950.95 1188.4 1526.1 1711.0 1757.5 True False 1574.6217876577211 1061.6230358868434 1542.2120966800974 1342.3929395663693 1609.327555280833 1316.7884657643767 987.1389226298066 1164.6964297182346 1461.9633241557067 1602.9671679989133 1541.3386417104243 1.0215936621885782 0.68876689856342 1.0005666859611746 0.8709266758385523 1.0441103023894616 0.8543148339570179 0.6404425970495219 0.7556395448736498 0.9485023502254931 1.039983767759238 1.0 10.589968150436173 -8.952340640548181 10.089032609071314 0.977356268064833 0.8571865151550853 0.18965605321572487 0.1253421039867905 0.5618410307526535 114.99282889996026 0.02154376501030431 0.022799248807261814 1.1159875752575773e-09 8.952340640548181 -0.12016975290974774 GSVSQPS(ph)TPSPPKPTGIFQTSANSSFEPVK ddPTM_A549_MK2206_60min_R1 1 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK 30 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GS(0.122)VS(0.33)QPS(0.419)T(0.101)PS(0.029)PPKPTGIFQTSANSSFEPVK 96.027 4.3243999999999996e-10 12838000.0 1061.6 751.91 953.79 702.77 948.44 804.73 841.24 420.4 974.98 1122.0 1018.2 True False 1240.7721263719104 790.1790073327223 1089.0517640327434 874.9486815485438 808.9257323908706 889.8859944634587 994.082418813063 479.9929874210038 754.1485867231297 868.5394207371578 765.3528391095891 1.6211766168077768 1.0324375463897357 1.4229407776153877 1.143196492961937 1.0569317719288456 1.1627133904654372 1.298855074438056 0.6271525535587316 0.9853606705117937 1.1348222366923155 1.0 9.579981194937202 -2.0000000000000013 0.30961504231181286 0.9723549290388042 5.703700323782061 0.38763222047107915 0.19198704808890094 33.00465239033561 0.41269226212538623 0.05483430643883223 88.90647330109066 0.009999999999999969 2.0000000000000013 4.731345394743257 GSVSQPSTPS(ph)PPKPTGIFQTSANSSFEPVK ddPTM_A549_PD325901_60min_R1 1 GSVSQPSTPSPPKPTGIFQTSANSSFEPVK 30 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 GS(0.01)VS(0.049)QPS(0.06)T(0.394)PS(0.487)PPKPTGIFQTSANSSFEPVK 100.64 9.1803e-15 24808000.0 727.57 787.23 906.81 1300.3 1174.5 892.4 888.62 849.23 929.8 1166.2 857.65 True False 801.4323707912747 853.5726348839247 968.3515796915098 1380.616577804437 1092.0071718050365 885.1325902742765 922.4369203715224 832.2914414419531 890.7237394665984 1092.5659329750636 752.1644870912912 1.0655014754691599 1.1348217704145949 1.2874199677204112 1.835524810727829 1.45181963592559 1.176780618421894 1.2263765920918372 1.1065284997175582 1.1842140313100027 1.4525625069060957 1.0 9.554904381945608 -7.842155056096528 1.5740267506100676 1.0897421582944147 1.35547183170248 0.03458402826737539 0.22247768006819546 0.4099754525771659 2.0678270308292945 0.03554202171951234 0.0539159996754922 1.438284975897143e-08 7.842155056096528 0.2657296734080654 GSVSSVS(ph)PKPPSSFK ddPTM_A549_MK2206_60min_R1 1 GSVSSVSPKPPSSFK 15 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 GSVS(0.001)S(0.007)VS(0.977)PKPPS(0.014)S(0.001)FK 86.8 1.1461e-05 26279000.0 5938.6 6975.7 7954.0 6302.5 10510.0 8099.3 6758.1 6883.0 11013.0 10678.0 10574.0 True False 6940.89049516977 7330.733334376281 9081.99680340163 7846.612782929972 8963.992922512814 8956.36255011978 7985.959291736681 7858.68632830345 8518.573084147185 8265.832383806925 7948.183972446276 0.8732674682960964 0.9223155075158688 1.1426505519859513 0.9872208305861543 1.127803905091781 1.126843890524996 1.0047526981536108 0.9887398625329906 1.0717634510824434 1.0399649042425074 1.0 12.956409550941688 -5.593394181221631 7.34266362387547 1.044261667013578 0.8852094112628988 0.5399570528877093 0.05582914002767271 0.11525967612085733 9.894584051819955 0.007718492268727435 0.030407303307191665 2.5503854307029663e-06 5.593394181221631 -0.15905225575067927 GSVSSVS(ph)PKPPSSFK ddPTM_A549_PD325901_60min_R1 2 GSVSSVSPKPPSSFK 15 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 GSVS(0.005)S(0.029)VS(0.961)PKPPS(0.004)SFK;GSVS(0.001)S(0.032)VS(0.967)PKPPSSFK 127.59 9.5851e-10 100969000.0 28688.0 26497.0 28608.0 26788.0 34412.0 33721.0 30953.0 32452.0 29812.0 28621.0 30541.0 True False 31600.384641010627 28729.99518122958 30549.510913879127 28442.63392003788 31995.019834955216 33446.387356161926 32130.933353131524 31804.71940189849 28559.105314022607 26813.865175509585 26784.65061535026 1.1797945433307415 1.072629081253143 1.14056036618119 1.0619005014662177 1.1945281756491868 1.2487147148745643 1.1996024818302955 1.1874233440129784 1.0662489395196892 1.001090720225508 1.0 14.70911885691038 -8.995538324696353 2.4329730192726013 1.025056511289038 1.1589354148599662 0.5688852829322176 0.05383725321271936 0.16205845482271056 1.9260483131807702 0.011228190057222672 0.01128927833811158 1.0103263394628504e-09 8.995538324696353 0.13387890357092824 GSWSS(ph)APTSR ddPTM_A549_MK2206_60min_R1 1 GSWSSAPTSR 10 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 GSWS(0.108)S(0.873)APT(0.019)SR 110.18 0.00019381 27485000.0 7106.0 7403.9 7605.1 5821.3 9812.8 7436.6 7369.6 7121.8 10896.0 11308.0 12677.0 True False 8305.319074980027 7780.726885386202 8683.617537031656 7247.518761328089 8369.350118937555 8223.536075984439 8708.560926352471 8131.336959597779 8428.073397336586 8753.51494625292 9528.95103259896 0.8715879687666739 0.816535509393216 0.9112878749533521 0.7605788650328886 0.878307600732299 0.8630053872510585 0.9139055176755659 0.8533297035298134 0.8844702180233456 0.9186231429153914 1.0 13.218101692568517 -10.926374513854304 0.30473302973748884 1.074219316155695 0.8421481202042707 0.36644665048654856 0.04641008201486392 1.8054535709288693 0.1920615051147121 0.14689190904859348 0.017537731792243404 1.1847466412360924e-11 10.926374513854304 -0.23207119595142434 GSWSS(ph)APTSR ddPTM_A549_PD325901_60min_R1 2 GSWSSAPTSR 10 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 GSWS(0.077)S(0.896)APT(0.027)SR;GSWS(0.063)S(0.936)APT(0.001)SR 148.9 3.1391e-08 78106000.0 15212.3 13576.900000000001 12923.099999999999 13541.3 13965.5 13248.8 12066.400000000001 11642.7 19188.9 16077.4 20442.5 True False 16756.641497296627 14721.0730111347 13800.139278913286 14377.715346476372 12984.611458359506 13140.906165425642 12525.593454987442 11410.477214978548 18382.457264197248 15062.270220213759 17928.202095684414 0.9346526443569152 0.8211126209179828 0.7697447410097629 0.8019608028591614 0.7242561964138666 0.7329740090663556 0.698653071185679 0.6364540713050764 1.0253374636278882 0.8401439329959066 1.0 14.12994319638402 -8.778637085110143 24.99659935214681 1.0119649496719227 0.7636041995405423 0.44369268466251577 0.08882592439845788 93.65506809022915 136125.66356530157 0.01293528914871131 0.013786935946216616 1.6648032494760267e-09 8.778637085110143 -0.24836075013138048 GSYGDLGGPIITTQVTIPK ddPTM_A549_MK2206_60min_R1 2 GSYGDLGGPIITTQVTIPK 19 0 P61978-3;P61978;P61978-2;Q5T6W2;S4R359 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 176.08 5.7773000000000006e-34 2763500.0 2210.96 2376.77 1820.03 2124.89 3617.1 2481.0 2345.64 2277.17 3755.5 3187.6000000000004 3128.8999999999996 False True 2584.11599521782 2497.7374409945264 2078.137621586005 2645.4881453899357 3085.0293815433974 2743.5377732454886 2771.8124255440475 2599.965821040645 2904.8852463011676 2467.5189461156524 2351.907776753087 1.098731855372878 1.0620048395106563 0.8835965602592488 1.1248264798214789 1.3117135850464414 1.166515881431824 1.1785378886627338 1.1054709911415035 1.235118687481654 1.0491563361902616 1.0 11.199615774840817 -6.484729049619939 24.6985642719735 1.1371466064473288 1.0169522578995283 0.27812749873780995 0.09376186224546763 623.3931540197884 403591.4994195785 0.015693478024308802 0.03646069207999429 3.2754498197512704e-07 6.484729049619939 -0.12019434854780053 GSYGDLGGPIITTQVTIPK ddPTM_A549_PD325901_60min_R1 2 GSYGDLGGPIITTQVTIPK 19 0 P61978-3;P61978;P61978-2;Q5T6W2;S4R359 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 187.98 3.6036e-43 5073600.0 3333.8 2761.8999999999996 2880.1000000000004 3492.7 5081.200000000001 3762.8 3435.0 3789.2 4225.4 3873.8999999999996 3669.1 False True 3672.244921786155 2994.6550058888943 3075.560905448242 3708.4361465027737 4724.314041188381 3732.1570043523648 3565.720804704126 3713.621433430107 4047.8211322243083 3629.301292876092 3217.823960341231 1.1412199570410106 0.9306460026394138 0.9557890497906844 1.152467068493553 1.46817044667894 1.1598387762507032 1.1081155615256224 1.1540784950324938 1.2579374080473504 1.1278744075518743 1.0 11.651869686394772 -6.274036330226403 22.221617798519077 1.154662297270109 1.0013611145081012 0.26249993367603675 0.12151603905642412 214.05205634484497 377600.08102215256 0.020043764131768026 0.04697477801347739 5.320637484434237e-07 6.274036330226403 -0.15330118276200788 GSYGS(ph)DAEEEEYR ddPTM_A549_MK2206_60min_R1 2 GSYGSDAEEEEYR 13 0 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GS(0.001)YGS(0.999)DAEEEEYR;GSYGS(1)DAEEEEYR 245.72 4.1239e-57 28675000.0 6352.7 5989.7 5278.799999999999 5342.7 7665.099999999999 6189.299999999999 6675.5 7132.1 8723.2 8671.400000000001 9261.400000000001 True False 7424.880451396793 6294.55014592279 6027.413216720707 6651.66173984292 6537.573943896572 6844.247617875166 7888.351940928398 8143.0970161402065 6747.409128087963 6712.5247174511505 6961.538778363338 1.066557364367995 0.9041894825733691 0.8658162237713996 0.9554872782604437 0.9390989768261493 0.9831515467740097 1.1331333764089087 1.1697265899673195 0.9692410461116878 0.9642300260272728 1.0 12.76519051926234 -7.420809542542464 4.898970179119571 1.0135902720461067 0.940617521973987 0.22835292897611992 0.07772787228393761 0.35297031953841423 13.421796271890445 0.012631667480970839 0.020305080980084714 3.794813679555901e-08 7.420809542542464 -0.07297275007211979 GSYGS(ph)DAEEEEYR ddPTM_A549_PD325901_60min_R1 2 GSYGSDAEEEEYR 13 0 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GSYGS(1)DAEEEEYR;GSYGS(1)DAEEEEYR 251.85 4.2990999999999997e-122 21600000.0 4183.4 3903.0 3374.5 4150.1 4791.2 3916.4 4147.9 3790.4 4227.1 4178.6 4949.4 True False 4608.0956883436875 4231.919507579692 3603.5138625169543 4406.442251439049 4454.682640742691 3884.5061368782804 4305.750604317974 3714.7974984887237 4049.4496871362194 3914.762482875664 4340.655176831618 1.0616129364386147 0.9749494800157578 0.8301774077219545 1.0151560241316961 1.0262696434675802 0.8949123988498218 0.9919586857071835 0.8558149281971467 0.9329120886520273 0.9018828548673552 1.0 12.083697103605273 -7.243236366032194 24.746955061610162 0.955588520428509 0.9747099519297219 0.055047111793504855 0.06945644815034112 3530.044148993319 4799088.618975766 0.010256113189181456 0.01774025074086595 5.711676923891408e-08 7.243236366032194 0.019121431501212927 GSYGS(ph)DAEEEEYRQQLSEHSK ddPTM_A549_MK2206_60min_R1 2 GSYGSDAEEEEYRQQLSEHSK 21 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GS(0.024)YGS(0.976)DAEEEEYRQQLSEHSK;GS(0.023)YGS(0.977)DAEEEEYRQQLSEHSK 156.89 8.1287e-28 11290500.0 2390.9 2761.2 2135.13 2010.8200000000002 2805.3 2206.25 1714.94 2070.24 2994.2 2978.1000000000004 2953.8 True False 2794.425468107196 2901.733285961237 2437.9235397091934 2503.4709902691393 2392.644086158439 2439.713910609775 2026.5223994570822 2363.702859844099 2316.0184807548803 2305.3451416197227 2220.28993926724 1.25858583542897 1.3069163781910813 1.0980203515734432 1.1275423745312099 1.0776268647814895 1.0988267196377748 0.9127287223243886 1.0645919787503921 1.0431153336303607 1.038308151042901 1.0 11.116532369629407 -5.836250639569037 0.6704640804321725 1.0185184561865055 1.368260682121334 0.7371795784974211 0.05401209945553339 0.5802012722297387 0.27340092764551405 0.008620633461185877 0.1325203701499409 1.4579725938367244e-06 5.836250639569037 0.3497422259348284 GT(ph)AGKSPDLSSQK ddPTM_A549_PD325901_60min_R1 1 GTAGKSPDLSSQK 13 1 Q9Y2I7 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 GT(0.632)AGKS(0.363)PDLS(0.005)SQK 63.631 0.0025371 29770000.0 3121.7 3262.9 4261.9 3733.4 3795.5 4042.4 3636.5 3543.7 4158.2 3529.0 3187.2 True False 3438.6126859259202 3537.8760341485454 4551.138162886655 3964.0036388334097 3528.917173764168 4009.4800346534485 3774.8889974691538 3473.018123521131 3983.445314530018 3306.1783377370903 2795.19460532544 1.230187221803674 1.2656993639756384 1.6282008251646483 1.4181494309130176 1.2624942703598636 1.4344189227521176 1.3504923736891834 1.2424960025696576 1.4251048234497548 1.1828079273758318 1.0 11.448733013656993 -10.853372483884607 0.7425739923502627 0.9578261009167667 1.3706031247176986 0.3886251232311482 0.12265028018575384 0.49544737245772513 0.40026255490993234 0.13013271159937925 0.021353884306197987 1.401611060952333e-11 10.853372483884607 0.41277702380093195 GT(ph)EPSPGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_A549_MK2206_60min_R1 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 2 GT(0.538)EPS(0.044)PGGT(0.09)PQPS(0.406)RPVS(0.922)PAGPPEGVPEEAQPPR 61.261 0.0006707999999999999 5482100.0 1387.4 1002.4 1365.4 890.94 1808.7 1472.0 1740.1 1428.6 2150.4 1823.2 2076.9 True False 1621.5592013266657 1053.4178784034273 1559.0342513659277 1109.2203399958169 1542.642625970402 1627.7660629654797 2056.2536457807664 1631.1084249040116 1663.3378334831668 1411.3378537326075 1561.1484104760411 1.0386963791816586 0.6747711308767937 0.9986457667343307 0.7105156259023332 0.9881460440394669 1.0426722097927414 1.317141683636441 1.0448131734039543 1.0654578528994338 0.9040382350978714 1.0 10.608391978211253 -6.96814672599537 9.335363126719171 1.0557297271653983 0.8522267393114571 0.3354659665943486 0.1357213071308649 0.25946550250964573 71.42053676291194 0.01746795144908984 0.03296778893872881 1.0761015922653542e-07 6.96814672599537 -0.20350298785394116 GT(ph)HSPPLTPEVAGLHGPRPL ddPTM_A549_MK2206_60min_R1 1 GTHSPPLTPEVAGLHGPRPL 20 1 O75808 O75808 CAPN15 Calpain-15 1 GT(0.525)HS(0.457)PPLT(0.019)PEVAGLHGPRPL 45.736999999999995 0.015769 1990800.0 561.62 403.97 433.82 351.22 616.86 378.93 495.0 609.82 498.83 569.19 639.54 True False 656.4077257092997 424.53034750462155 495.34219930245143 437.2689157668648 526.1207111495011 419.0281210866233 584.935092616217 696.2638524954252 385.8458014678239 440.609583680377 480.7245675939369 1.3654549194243815 0.8831051627534418 1.0304074987922438 0.9096038464508461 1.094432751341949 0.8716594685058243 1.2167780305963178 1.44836336528478 0.8026338312581184 0.9165530812907307 1.0 8.909066724559555 GT(ph)HSPPLTPEVAGLHGPRPL ddPTM_A549_PD325901_60min_R1 1 GTHSPPLTPEVAGLHGPRPL 20 1 O75808 O75808 CAPN15 Calpain-15 1 GT(0.562)HS(0.438)PPLTPEVAGLHGPRPL 62.611000000000004 0.0011890999999999998 3421200.0 576.92 625.61 761.87 580.58 727.53 909.03 477.43 778.83 822.25 658.15 780.17 True False 635.4884936939428 678.3323502784859 813.5750796964868 616.441108007152 676.4308026422462 901.6271610679357 495.5988599097208 763.295624669685 787.6936919513989 616.5942966794181 684.2140359051044 0.9287861112835758 0.9914037343317023 1.1890651711350215 0.9009477673045689 0.9886245635803682 1.317756014571126 0.7243330798587371 1.1155801907219989 1.1512387215345672 0.9011716572925366 1.0 9.418303889500223 -5.529273157524854 24.744565383029048 1.0590149661987676 0.9444404475743998 0.013583502988917306 0.15555156392445407 239.6435328502142 927360.063517966 0.018956632296480223 0.07381254961582005 2.9561525550249978e-06 5.529273157524854 -0.11457451862436774 GT(ph)LSDSEIETNSATSTIFGK ddPTM_A549_MK2206_60min_R1 1 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GT(0.333)LS(0.333)DS(0.333)EIETNSATSTIFGK 66.87100000000001 0.0012856 1093800.0 508.82 599.86 640.9 548.69 912.81 627.03 439.53 791.3 798.36 928.44 1034.1 True False 594.6963765453611 630.3903117907822 731.7892571410744 683.1190746316303 778.5368581920949 693.3818984111724 519.386911631527 903.4691982546157 617.5327347189459 718.7047591704162 777.3044302919135 0.7650752438423969 0.8109953928270314 0.9414448556098592 0.8788308004047882 1.001585515085407 0.8920338948161863 0.668189825492791 1.1623106250858772 0.7944541554806706 0.9246116851546949 1.0 9.602335928761809 -11.093813580084225 1.3978522712695918 1.0005854280137767 0.8736115047565968 0.048772239721332045 0.12567061332612986 0.7304719146745781 2.530586173757933 0.08724958834149679 0.018682313511553514 8.057242222655219e-12 11.093813580084225 -0.12697392325717993 GT(ph)LSDSEIETNSATSTIFGK ddPTM_A549_PD325901_60min_R1 1 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GT(0.599)LS(0.392)DS(0.009)EIETNSATSTIFGK 129.62 3.1655e-23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GT(ph)PDTDLEVQR ddPTM_A549_MK2206_60min_R1 2 GTPDTDLEVQR 11 0 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 GT(0.998)PDT(0.002)DLEVQR;GT(0.999)PDT(0.001)DLEVQR 83.182 0.0006678999999999999 3392700.0 1038.74 1342.6 1040.34 1281.3600000000001 1952.08 1480.08 1679.03 1547.56 2420.8999999999996 2162.46 2229.6 True False 1214.0539172452507 1410.9326052917415 1187.8758554753397 1595.2932575224356 1664.931617904739 1636.7010832024102 1984.0880172836492 1766.9313692037308 1872.5700153829055 1673.9587841063046 1675.928786170437 0.7244066259040824 0.8418810017075832 0.7087865936056165 0.951886065020545 0.9934381649408702 0.9765934547507453 1.1838737025439894 1.0542997911273058 1.117332687901257 0.9988245311612352 1.0 10.710745131777191 -6.565131340192378 1.478597795229698 1.0618567282403544 0.7583036204511641 0.7760812443421169 0.06705585194163113 0.14119330989409368 0.6051376255521226 0.010287837887955339 0.03096156863874577 2.7218780278823867e-07 6.565131340192378 -0.3035531077891903 GT(ph)PDTDLEVQR ddPTM_A549_PD325901_60min_R1 2 GTPDTDLEVQR 11 0 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 GT(0.999)PDT(0.001)DLEVQR;GT(0.999)PDT(0.001)DLEVQR 100.55 0.00028096 7478900.0 2600.3999999999996 2858.6 2331.6000000000004 2291.6 2816.4 2034.5300000000002 1960.55 2267.3999999999996 2198.1 2115.56 2245.1 True False 2864.390693686696 3099.504254257571 2489.836397049797 2433.146927398792 2618.5857800525355 2017.9614622262718 2035.1598031041258 2222.17492825911 2105.7215010986542 1981.9831805562721 1968.9669328614916 1.454768308131965 1.57417791153713 1.264539467623932 1.2357479888515492 1.3299287745005222 1.0248833683019636 1.0336180710492868 1.1285994148361 1.0694549847205497 1.00661069898003 1.0 10.943223167258928 -6.073332661572409 0.4943145006170108 1.026046999966039 1.6703370135459044 0.8163457405030679 0.08013049469663377 0.6306904854443881 0.16494998555658075 0.01629771488652606 0.2029977489955663 8.44631625047914e-07 6.073332661572409 0.6442900135798653 GT(ph)PGKGATPAPPGK ddPTM_A549_MK2206_60min_R1 2 GTPGKGATPAPPGK 14 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GT(0.918)PGKGAT(0.082)PAPPGK;GT(0.926)PGKGAT(0.074)PAPPGK 66.809 0.0016009 16190800.0 6808.5 7486.799999999999 6430.8 6616.6 9730.1 7241.299999999999 6526.8 6966.8 10009.3 10211.1 11036.9 True False 7957.6083481567 7867.846141291682 7342.784139214885 8237.667297030464 8298.815179385525 8007.569559614082 7712.635075732379 7954.365234930189 7742.2095315676415 7904.405418083054 8296.1331270562 0.959194871428055 0.9483751069076092 0.885085138673564 0.9929526408110471 1.0003232894516334 0.9652171001811645 0.9296662622950375 0.958803952770309 0.933231110566193 0.9527818921208481 1.0 13.018223329753773 -7.499421383541732 0.005195006264382378 1.9081128754992382 3.979393369439996e-06 0.030547462304844508 0.03207017389551822 10896.416903103605 22.2362398791029 4028.858401348651 4137.814914964154 3.1664936136637226e-08 7.499421383541732 -1.9081088961058688 GT(ph)PGKGATPAPPGK ddPTM_A549_PD325901_60min_R1 3 GTPGKGATPAPPGK 14 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GT(0.5)PGKGAT(0.5)PAPPGK;GT(0.944)PGKGAT(0.056)PAPPGK;GT(0.773)PGKGAT(0.227)PAPPGK 61.815 0.002522 28744900.0 11402.2 11490.5 12447.0 12279.6 15687.0 13560.7 14139.400000000001 13502.9 15326.0 15309.4 15746.2 True False 12559.742950144006 12458.84476091326 13291.72826989141 13038.08300300498 14585.199237212093 13450.266155235753 14677.482604376559 13233.574066679872 14681.901517600654 14342.761871281442 13809.51722338587 0.9094990611890891 0.9021926371049888 0.9625049199679765 0.9441374953300686 1.05617010365233 0.9739852550716444 1.0628526954961774 0.9582937515200994 1.0631726859167412 1.0386142860224354 1.0 13.753375263837547 -6.308642248202715 1.0873703261481922 1.0255748157360385 0.900617751008853 0.5880845001875781 0.03660591725894983 0.29942965935225696 0.6127550088853908 0.005619728357575171 0.027694813691040845 4.913124300608952e-07 6.308642248202715 -0.12495706472718549 GT(ph)PGPDSSGSLGSGEFTGVK ddPTM_A549_MK2206_60min_R1 2 GTPGPDSSGSLGSGEFTGVK 20 0 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;M0R2S2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GT(1)PGPDSSGSLGSGEFTGVK;GT(1)PGPDSSGSLGSGEFTGVK 128.76 1.1324000000000002e-16 7211000.0 2873.0 3545.6000000000004 3674.2 2838.8 5366.8 4179.6 3671.0 3922.7999999999997 6217.3 5169.1 5418.3 True False 3357.89216189384 3726.0558955179467 4195.256808531341 3534.306127438576 4577.3508293569685 4621.882497806061 4337.973181806327 4478.868913071155 4809.091476987953 4001.396719904135 4072.786572527487 0.8244704459949154 0.914866475118443 1.0300703790446482 0.8677857443546959 1.123886741385606 1.1348206972057995 1.0651118354857154 1.099706265799158 1.1807865183575112 0.9824714967622158 1.0 11.991800498997568 -5.972188640287933 0.7923342183479072 1.0917139433248066 0.8147207183568246 0.5012533178938487 0.07753204572998094 0.7555239991116006 0.5932606596041465 0.013666346244395604 0.14811567733424652 1.0661329348053175e-06 5.972188640287933 -0.27699322496798207 GT(ph)PGPDSSGSLGSGEFTGVK ddPTM_A549_PD325901_60min_R1 1 GTPGPDSSGSLGSGEFTGVK 20 0 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;M0R2S2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GT(0.987)PGPDS(0.004)S(0.004)GS(0.005)LGSGEFTGVK 73.887 0.00043298 3911000.0 3389.4 3374.3 3613.3 3109.2 3545.1 3517.2 3476.3 3123.2 3812.8 3403.2 4313.8 True False 3733.4893928555953 3658.664103106878 3858.5202665380134 3301.248222494467 3296.104405931063 3488.557089323943 3608.59249880435 3060.9053258969966 3652.561275369161 3188.321371206256 3783.2299474312526 0.9868523575709612 0.9670742074747657 1.0199010687039738 0.8726004679509257 0.8712408317049458 0.9221107724875705 0.9538390605240692 0.8090719751188526 0.9654610811719724 0.842751145319906 1.0 11.885402751754295 -8.984885078042735 21.487035828311477 0.9847626284919695 0.924667907184262 0.0 0.07065883421191965 23.760517804335073 33779.947244031406 0.0102860145491821 0.01039623941585267 1.0354161197451018e-09 8.984885078042735 -0.060094721307707544 GT(ph)PPLTPSDSPQTR ddPTM_A549_MK2206_60min_R1 1 GTPPLTPSDSPQTR 14 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(0.995)PPLT(0.003)PS(0.001)DSPQTR 73.877 0.0010199999999999999 12071000.0 3706.7 3355.4 3165.3 3481.3 3887.2 2832.9 2763.5 3191.9 4298.5 4548.5 4983.5 True False 4332.300339885795 3526.1755279278327 3614.1871362593893 4334.218656281498 3315.3980293427044 3132.6755976731743 3265.5921786765975 3644.3615997837846 3324.896613293987 3520.990690929555 3745.95941239701 1.1565262361221342 0.9413277453723026 0.9648228233062193 1.1570383389466745 0.8850597842492925 0.8362812440801647 0.871763897886702 0.9728780263136344 0.8875954721480582 0.9399436308031167 1.0 11.871119552675832 -2.0000000065271224 0.7309027772962075 0.9393408919834159 30.581599975034266 0.3393829789760755 0.08262651997175652 313.9450233360704 1.3686014737554262 0.013813454030511395 15301.230776976043 0.009999999849707454 2.0000000065271224 29.64225908305085 GT(ph)PPPVFT(ph)PPLPK ddPTM_A549_MK2206_60min_R1 2 GTPPPVFTPPLPK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 2 GT(1)PPPVFT(1)PPLPK;GT(1)PPPVFT(1)PPLPK 58.486999999999995 0.0027469 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GT(ph)PPPVFT(ph)PPLPK ddPTM_A549_PD325901_60min_R1 2 GTPPPVFTPPLPK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 2 GT(1)PPPVFT(1)PPLPK;GT(1)PPPVFT(1)PPLPK 77.078 0.0035618000000000004 1832200.0 1079.9 1032.7 1009.2 1128.4 1074.5 920.2 1158.1 1177.3 1082.0 1391.4 1237.5 True False 1189.5306530196376 1119.7292532609645 1077.690380812598 1198.098705217663 999.0308268237649 912.7061962913377 1202.1721292366362 1153.8178279260171 1036.5273027563558 1303.54676654219 1085.295345158833 1.096043264467839 1.031727684317205 0.9929927237040513 1.1039379377807257 0.9205151678574247 0.8409749478449695 1.1076912239595926 1.0631371755834407 0.9550647272007418 1.2010986432005897 1.0 10.083871986330609 -6.758300281448001 24.999952756839527 0.9807677699833737 1.0499160792495577 0.0 0.09735599711528206 115.20725976289656 917497.6495670142 0.010316002203458728 0.020783051240567604 1.7446154675206863e-07 6.758300281448001 0.06914830926618398 GT(ph)PPPVFTPPLPK ddPTM_A549_MK2206_60min_R1 2 GTPPPVFTPPLPK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(1)PPPVFTPPLPK;GT(1)PPPVFTPPLPK 102.87 0.00013619 16933700.0 6805.2 7085.5 7677.6 6866.2 9734.6 8100.1 7870.9 7800.7 11387.9 10761.8 12002.1 True False 7953.751388833951 7446.121685382563 8766.399127205985 8548.419308235434 8302.653235346643 8957.247205588787 9300.94064742017 8906.473113641827 8808.558832739467 8330.701905605298 9021.64732889138 0.8816296069745992 0.8253616455984403 0.9717071403503021 0.9475452760007081 0.9203034581897039 0.9928616004422656 1.0309581286373684 0.987233571536241 0.9763803118894364 0.9234124990595272 1.0 13.139175174487454 -5.872454885506937 0.7291167117658909 0.991168327232577 0.8220611658545892 0.5309373872367174 0.03876687630175421 0.6217365820578367 0.3701729565015939 0.005289258852058419 0.07226113700376693 1.3413592685143782e-06 5.872454885506937 -0.16910716137798776 GT(ph)PPPVFTPPLPK ddPTM_A549_PD325901_60min_R1 4 GTPPPVFTPPLPK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(1)PPPVFTPPLPK;GT(1)PPPVFTPPLPK;GT(1)PPPVFTPPLPK;GT(1)PPPVFTPPLPK 131.69 3.9779e-08 26145600.0 18019.4 17359.3 17176.699999999997 18576.100000000002 21889.0 19432.7 17858.0 20748.2 19931.4 20157.9 20848.499999999996 True False 19848.71622281882 18822.229133468638 18342.414153887992 19723.503507615944 20351.59215295057 19274.446534091156 18537.59596227256 20334.360874351965 19093.752571310546 18885.12675383127 18284.266669530454 1.0855626086385746 1.0294221514956716 1.0031801923155297 1.07871449613475 1.1130658134003908 1.0541547485856118 1.0138550425521995 1.1121234032447065 1.0442722651343217 1.032862137440935 1.0 14.158315144951858 -10.00327629384919 0.8453745507787458 1.0037575025858263 1.0588973958706083 0.15996319566578077 0.03567395439388484 0.5377702988978816 0.7776528312139673 0.014960103323776208 0.007071587559905945 9.924844387575458e-11 10.00327629384919 0.05513989328478197 GT(ph)PPSTLSVK ddPTM_A549_MK2206_60min_R1 1 GTPPSTLSVK 10 0 A0A087WZE9 A0A087WZE9 HMGN3 1 GT(0.989)PPS(0.005)T(0.005)LSVK 64.439 0.0064126999999999995 1885400.0 2272.6 2369.8 2360.3 1799.9 2951.7 2259.5 2297.2 2291.2 3490.5 3439.8 3544.1 True False 2656.15932026451 2490.412697765804 2695.0260315651094 2240.875580800582 2517.5088400933464 2498.5987902652882 2714.571504561562 2615.9846165057197 2699.907323183126 2662.7467909551465 2664.002157816042 0.9970559942947036 0.9348388440523834 1.011645588821332 0.8411688309733425 0.9450100604112155 0.9379116991082499 1.0189824721414553 0.9819754120057893 1.013477904010603 0.9995287665750523 1.0 11.379379535640798 -7.756293960274662 24.970227081228007 1.0051693494942382 0.9425252824510775 0.3261385246994115 0.041524603826406985 102.85044366913053 499121.08134591446 0.005998813015549558 0.008744611611176753 1.7526937569764198e-08 7.756293960274662 -0.06264406704316072 GT(ph)PPVDPK ddPTM_A549_PD325901_60min_R1 2 GTPPVDPK 8 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 GT(1)PPVDPK;GT(1)PPVDPK 70.1 0.0071594 19949400.0 7457.1 8142.7 7823.5 7290.7 9260.900000000001 7405.6 7223.0 7974.0 7736.5 8047.9 8349.0 True False 8214.139302373122 8828.913905808136 8354.449756527314 7741.0299806189405 8610.446332370588 7345.291248918852 7497.875217577256 7814.952314518011 7411.3618094034555 7539.754220536798 7322.125928671592 1.1218243693690968 1.2057855862921374 1.1409868988750116 1.057210713941292 1.1759489547501851 1.0031637423984405 1.0240024947150217 1.0673064613538856 1.0121871546052545 1.02972200887901 1.0 12.838046870529038 -7.005050913339254 0.5847277512560629 1.0044799579165935 1.1755131307882023 0.5992621974369534 0.044182633223835525 0.414837300701944 0.24752749625394616 0.008484118531278645 0.03333540287881169 9.884372111007144e-08 7.005050913339254 0.1710331728716088 GT(ph)PQDLAR ddPTM_A549_PD325901_60min_R1 1 GTPQDLAR 8 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 GT(1)PQDLAR 80.758 0.0040788000000000005 30524000.0 2227.1 2093.6 1978.5 1955.8 2473.8 2014.0 2147.2 2144.1 2519.6 2715.8 2695.1 True False 2453.1935524956325 2270.0350194898383 2112.772907687006 2076.6053240559254 2300.048822146699 1997.5986517395709 2228.9128709929246 2101.3342434860897 2413.70997414502 2544.3239245186733 2363.619785646522 1.0378968594665954 0.9604061673857222 0.8938717303506994 0.8785699530298654 0.9731044037260695 0.845143818760667 0.9430082133041754 0.8890322615535692 1.0211921514630564 1.0764522872796665 1.0 11.20678226540651 -8.772010189376326 24.999884167295438 1.0100074117410422 0.925240149703154 0.4117972378743816 0.053989534279885724 155.9073316352787 368718.62999796733 0.008447279936571675 0.009037515890048229 1.6904012711422251e-09 8.772010189376326 -0.0847672620378882 GT(ph)PSQS(ph)PVVGR ddPTM_A549_MK2206_60min_R1 2 GTPSQSPVVGR 11 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 GT(0.998)PS(0.044)QS(0.958)PVVGR;GT(0.984)PS(0.26)QS(0.756)PVVGR 113.07 5.3778e-05 52021000.0 1374.42 1284.71 1104.79 1128.59 1595.6399999999999 1224.87 996.3599999999999 1144.83 1654.49 1364.29 1694.3700000000001 True False 1606.3884946571973 1350.0962515599228 1261.4658346027272 1405.0946006643308 1360.9234697315267 1354.484930397097 1177.3857149072605 1307.1131583948327 1279.7506566776249 1056.0959414594447 1273.6111667669566 1.261286440142474 1.0600537171695208 0.9904638617490611 1.1032367156697778 1.0685549131813998 1.0634995717220643 0.9244467586571473 1.0263047251013984 1.004820537123786 0.8292137891192717 1.0 10.314709174972151 -2.1948576679892304 1.0340890570151071 1.0106227255201499 199.99852136485745 0.5178952924232152 0.07158935575559602 522.7208222474733 0.9024580249934182 0.006874336457968328 246259.3045300389 0.006384726995636012 2.1948576679892304 198.98789863933732 GT(ph)PSQS(ph)PVVGR ddPTM_A549_PD325901_60min_R1 2 GTPSQSPVVGR 11 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 GT(1)PS(0.428)QS(0.572)PVVGR;GT(0.995)PS(0.034)QS(0.971)PVVGR 114.87 3.3596e-05 83685000.0 1725.31 1727.7 1612.28 1908.97 1838.8999999999999 2063.52 1725.35 1930.6599999999999 1652.8899999999999 1722.92 1871.35 True False 1900.4622010939077 1873.299342363678 1721.6990162272448 2026.8827413145698 1709.7420078606062 2046.7153772778754 1791.0091383977456 1892.1514717265302 1583.4247813798086 1614.1345371646328 1641.1858134650367 1.157981128950573 1.1414303773492775 1.049057944628598 1.2350111271283846 1.0417723537658583 1.247095460176227 1.091289678294493 1.1529172725004426 0.9648053062539718 0.983517237305817 1.0 10.68052287329344 -8.760505557817112 24.99999999906751 0.9833802769354442 1.1385107754594819 0.5613364494077264 0.06172472266111064 11.56371078371965 309579.8696901189 0.009432358219123044 0.010398293863359612 1.7357790493627964e-09 8.760505557817112 0.1551304985240377 GT(ph)PSQSPVVGR ddPTM_A549_MK2206_60min_R1 2 GTPSQSPVVGR 11 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 GT(0.922)PS(0.069)QS(0.009)PVVGR;GT(0.891)PS(0.047)QS(0.062)PVVGR 146.67 2.4176999999999997e-17 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GT(ph)SDEEDSVLGIAR ddPTM_A549_PD325901_60min_R1 1 GTSDEEDSVLGIAR 14 0 A6QL64 A6QL64 ANKRD36 Ankyrin repeat domain-containing protein 36A 1 GT(0.5)S(0.5)DEEDSVLGIAR 66.00399999999999 0.0046815 1215000.0 392.5 416.47 375.56 510.39 606.46 579.94 616.47 331.83 511.54 554.83 671.61 True False 432.34631105677175 451.5673885015919 401.0477600257423 541.9156311202082 563.8643417734202 575.2171609184942 639.9301031953277 325.21139033440073 490.0417527282681 519.79793911212 589.006227686565 0.7340267228665728 0.7666597860521942 0.6808888279516744 0.9200507662689508 0.9573147367016909 0.976589268296483 1.0864572785737359 0.552135741606215 0.8319805966279866 0.8824999035302669 1.0 9.202139077828805 -14.999998880003318 0.02249058788040966 2.092691708256046 6.547196497448641e-08 0.09252466094330813 0.1435612709998622 2728.4111729301535 4.761888240026062 307.10670648045476 158.82804706220267 1.0000025788909896e-15 14.999998880003318 -2.092691642784081 GT(ph)SPSSSSRPQR ddPTM_A549_MK2206_60min_R1 2 GTSPSSSSRPQR 12 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GT(0.458)S(0.395)PS(0.127)S(0.014)S(0.004)S(0.004)RPQR;GT(0.493)S(0.432)PS(0.069)S(0.003)S(0.002)S(0.001)RPQR 47.532 0.013952 500100000.0 2279.36 2365.22 2099.73 2109.9 2525.1000000000004 1806.9499999999998 1831.55 1985.04 3268.6000000000004 2968.4 2957.7 True False 2664.0602429983765 2485.5995953285656 2397.503287403383 2626.8255947170096 2153.661134979743 1998.1602496436649 2164.3189270327916 2266.4254989300416 2528.2673188816407 2297.8363783566638 2223.2214616327174 1.198288289751355 1.1180170928644957 1.078391572220014 1.1815402289198345 0.9687119219324692 0.8987679743682534 0.9735057727642354 1.0194330785497165 1.1372089387014552 1.033561621283176 1.0 11.118435951284072 -6.752719192065178 24.99459818880604 1.037360075098813 1.1375085860543543 0.4596521118262513 0.06688307980451628 217.0199077535411 622037.6018186623 0.012024000534489128 0.024730814742189317 1.7671800820195588e-07 6.752719192065178 0.10014851095554134 GT(ph)TPLAPPPKPVR ddPTM_A549_MK2206_60min_R1 1 GTTPLAPPPKPVR 13 1 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCR2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 GT(0.5)T(0.5)PLAPPPKPVR 52.966 0.009093200000000001 3827600.0 1515.9 1972.7 2220.8 1820.5 2607.4 1950.9 1659.3 1657.3 3349.4 3314.2 3087.8 True False 1771.7468598032958 2073.102003917039 2535.7428339193298 2266.5225817253518 2223.854914001893 2157.3429430973893 1960.7733316729064 1892.2273502683877 2590.766247892727 2565.519918188135 2321.014041055381 0.7633503410421725 0.8931880493813753 1.092515077059297 0.9765225636871842 0.9581393626514604 0.9294829350176748 0.8447916716528476 0.8152588983942463 1.1162217039905058 1.1053444196406392 1.0 11.180539535004842 -8.77197998080369 24.998168300171933 1.054882471006979 0.9171462068580896 0.4031150558454498 0.08804793934181013 188.22178419268542 446386.8271259677 0.016519573996197412 0.0176760880433292 1.6905188558404482e-09 8.77197998080369 -0.1377362641488895 GT(ph)TVTPDKRK ddPTM_A549_PD325901_60min_R1 1 GTTVTPDKRK 10 2 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 GT(0.358)T(0.358)VT(0.285)PDKRK 42.041000000000004 0.028418000000000002 7226200.0 959.8 833.46 1146.7 969.25 1420.8 1212.9 1037.2 1444.9 1071.7 1404.1 1322.2 True False 1057.238189432585 903.6985992281242 1224.521957667267 1029.1183711735378 1321.0079094939083 1203.0225445357132 1076.6712135776177 1416.0803359978788 1026.660175937141 1315.444886374795 1159.5777821163717 0.9117440897349685 0.7793341793585967 1.0560067436203928 0.8874940405423002 1.1392145743624948 1.0374660183123288 0.9285027966063308 1.2212034050991891 0.8853741351126616 1.1344171185946204 1.0 10.179383880937396 -5.759631190615161 24.999999241117735 0.9826713000148368 0.845539135205172 0.19598970964036955 0.1141517718515445 54.70445526552657 756275.8608982009 0.014444368160804792 0.0507746843614658 1.7392772220646574e-06 5.759631190615161 -0.13713216480966484 GT(ph)VIKVPLK ddPTM_A549_PD325901_60min_R1 1 GTVIKVPLK 9 1 A0A590UK71;A0A590UJ75;A0A590UJ40;A0A1Y0BRN3;A0A5F9ZI03;A0A0D9SGC1;A0A0A0MRM8;A0A590UKB0;A0A590UK22;A0A590UK86;A0A590UJY4;E7EW20;Q9UM54-5;Q9UM54-2;Q9UM54-1;Q9UM54-4;Q9UM54-6;Q9UM54 A0A590UK71 MYO6 Unconventional myosin-VI 1 GT(1)VIKVPLK 73.848 0.00099982 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GT(ph)VIKVPLKVEQANNAR ddPTM_A549_PD325901_60min_R1 2 GTVIKVPLKVEQANNAR 17 2 A0A590UK71;A0A590UJ75;A0A590UJ40;A0A1Y0BRN3;A0A5F9ZI03;A0A0D9SGC1;A0A0A0MRM8;A0A590UKB0;A0A590UK22;A0A590UK86;A0A590UJY4;E7EW20;Q9UM54-5;Q9UM54-2;Q9UM54-1;Q9UM54-4;Q9UM54-6;Q9UM54 A0A590UK71 MYO6 Unconventional myosin-VI 1 GT(1)VIKVPLKVEQANNAR;GT(1)VIKVPLKVEQANNAR 78.975 0.0001145 30821000.0 5042.0 5397.2 6359.5 6169.4 6874.700000000001 6477.700000000001 6976.2 7321.4 6541.9 7275.799999999999 6226.9 True False 5553.860128275777 5852.04098547505 6791.09391278014 6550.469826276006 6391.844788427484 6424.947758874591 7241.6831085231215 7175.368933472813 6266.96669307006 6816.404746304207 5461.030775571345 1.016998503857492 1.071600074413204 1.2435553271661688 1.199493299978827 1.170446578880295 1.1765082496174726 1.3260652441141902 1.3139220832759564 1.1475794498547567 1.2481901359713652 1.0 12.41495757178722 -10.004122155450013 1.0044486080959336 1.0182969230030163 1.1888654355103283 0.0 0.11132198468469555 0.3854125091666439 0.7857700683346863 0.03413912295342846 0.018051518194646333 9.905532894948236e-11 10.004122155450013 0.17056851250731198 GTAAFS(ph)PSHPLLPLR ddPTM_A549_MK2206_60min_R1 2 GTAAFSPSHPLLPLR 15 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 GT(0.005)AAFS(0.991)PS(0.004)HPLLPLR;GT(0.004)AAFS(0.819)PS(0.177)HPLLPLR 91.65700000000001 8.9173e-06 5586200.0 165.27 466.11 529.4 553.13 684.99 447.14 502.26 567.36 996.48 620.86 864.26 True False 193.16353553644092 489.8330080832216 604.4768805281398 688.6468748309488 584.2288784007662 494.4560580124899 593.514140641255 647.7850174671286 770.7788710515746 480.60729479400305 649.6403896374517 0.2973391719751919 0.7540063947633941 0.9304792161483116 1.0600431959214631 0.8993112000422419 0.7611227163514782 0.9136041263882634 0.997144001204484 1.1864700584299066 0.7398051329016322 1.0 9.34349752075568 -5.256137409507948 1.3386419413374908 1.0341798483704632 1.5647175276831687e-17 0.5933408994200877 0.14205701189001177 0.5534044194820367 0.8371400889682066 0.020069103175571913 0.7781268848293812 5.544502587573284e-06 5.256137409507948 -1.0341798483704632 GTAAFS(ph)PSHPLLPLR ddPTM_A549_PD325901_60min_R1 2 GTAAFSPSHPLLPLR 15 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 GT(0.001)AAFS(0.539)PS(0.461)HPLLPLR;GT(0.001)AAFS(0.677)PS(0.322)HPLLPLR 120.63 1.7506e-07 16526400.0 812.04 1193.13 1017.3599999999999 1019.88 1193.1100000000001 1065.72 1032.95 869.54 1077.41 1221.1399999999999 1693.22 True False 894.4777030077473 1293.6792523900992 1086.4041674826642 1082.875671284465 1109.3100696060512 1057.0411296583395 1072.2594775019281 852.1963425590664 1032.1302044942008 1144.0370119989439 1484.9646742059317 0.6023562166460689 0.8711852038378487 0.7316027016357185 0.7292265533949625 0.7470279184918943 0.711829141810111 0.7220774312865772 0.5738832427207529 0.695053708968613 0.7704136211931808 1.0 10.536212895853712 -10.609645298515884 0.8975871215989837 0.9996764422033452 0.7139096452956594 0.21548674223156827 0.09835041207044719 0.26996197264531047 0.38912214282777496 0.04947662360239064 0.013588402781682907 2.4567145698842027e-11 10.609645298515884 -0.2857667969076858 GTADVT(ph)HDLQEMKEESR ddPTM_A549_PD325901_60min_R1 1 GTADVTHDLQEMKEESR 17 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 GT(0.009)ADVT(0.991)HDLQEMKEESR 57.00899999999999 0.0047718000000000005 2437800.0 239.28 346.11 329.97 283.05 360.83 401.24 314.95 316.37 511.26 389.36 464.97 True False 263.5715294513739 375.2779043731505 352.36374847080185 300.533355646809 335.4865455959226 397.972434470698 326.93559459725276 310.05975216253637 489.7735201545416 364.7757431514067 407.7816376876789 0.6463545807161727 0.9202913267531112 0.864099105758848 0.7369958033200807 0.8227112615916088 0.9759449609536028 0.8017418254807581 0.7603573175112216 1.201068108244885 0.8945369517368741 1.0 8.67165300236964 -8.755899039433624 24.993904598516647 1.0949488322814598 0.8235757472219364 0.39261340754835394 0.11201927168227484 68.59845013662402 309465.0295000478 0.01797009618260428 0.020095902843788767 1.754288274355288e-09 8.755899039433624 -0.2713730850595234 GTAGKS(ph)PDLSSQK ddPTM_A549_MK2206_60min_R1 3 GTAGKSPDLSSQK 13 1 Q9Y2I7 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 GT(0.026)AGKS(0.932)PDLS(0.035)S(0.007)QK;GT(0.083)AGKS(0.899)PDLS(0.016)S(0.003)QK;GT(0.024)AGKS(0.689)PDLS(0.13)S(0.158)QK 61.038000000000004 0.0023394 75669000.0 4124.700000000001 4437.2 4048.6 3432.2 5159.200000000001 4227.1 4534.0 3475.0 6166.1 5674.799999999999 6266.8 True False 4820.848520766973 4663.034527186438 4622.752358341945 4273.089154077314 4400.288514350916 4674.408916278112 5357.769110953391 3967.5918917411714 4769.488195238352 4392.858738680234 4710.580605118812 1.0234085614686939 0.9899065355381654 0.9813551122166496 0.907125790276024 0.9341286952120693 0.9923211824883341 1.137390389866443 0.8422723702954446 1.012505377798976 0.9325514425773074 1.0 12.201689175604574 -7.506688650624708 24.67418549475988 1.0029580157647795 0.9656305658319772 0.0 0.07232438596316003 1433.9161507013016 2185331.658338001 0.009922243355977863 0.015590335434345706 3.113947952617072e-08 7.506688650624708 -0.03732744993280235 GTAGKS(ph)PDLSSQK ddPTM_A549_PD325901_60min_R1 4 GTAGKSPDLSSQK 13 1 Q9Y2I7 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 GTAGKS(0.996)PDLS(0.003)S(0.001)QK;GT(0.003)AGKS(0.995)PDLS(0.002)SQK;GT(0.074)AGKS(0.914)PDLS(0.01)S(0.002)QK;GT(0.182)AGKS(0.818)PDLSSQK 113.28 7.006900000000001e-06 90708200.0 18781.83 19466.51 20526.9 19747.49 22194.8 21336.780000000002 20452.4 20965.62 22614.5 21073.609999999997 22152.789999999997 True False 20688.54755514752 21107.021115422784 21919.978872277174 20967.24760749623 20635.913815903285 21163.020337866867 21230.727273982713 20547.44426188928 21664.091209042144 19743.01866815521 19428.137268105987 1.0648755086320434 1.0864150702740256 1.1282594193042836 1.0792206848320403 1.0621663585721124 1.089297447604971 1.0927824413118559 1.0576126768272731 1.115088436430125 1.0162074930655418 1.0 14.24585996431774 -10.891616309895253 1.0398599255654748 0.997897325887144 1.088184067187362 0.6731608334278925 0.020873605693716688 0.24250615889152474 0.44733595987184527 0.016650396047135117 0.0036240423747920985 1.2834639955445749e-11 10.891616309895253 0.09028674130021797 GTAQYSSQKS(ph)VEER ddPTM_A549_PD325901_60min_R1 1 GTAQYSSQKSVEER 14 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 GTAQYS(0.007)S(0.034)QKS(0.959)VEER 84.035 7.5337e-05 11187000.0 3055.8 3539.3 3149.9 3086.4 4121.5 3908.6 3733.8 4060.8 3315.0 3551.1 3796.9 True False 3366.022566438939 3837.569232174429 3363.671155887439 3277.039918277025 3832.020058403113 3876.769657492201 3875.891802213756 3979.804158364029 3175.682078223029 3326.882939965484 3329.9053705321817 1.0108463129992746 1.1524559424825676 1.0101401636377014 0.9841240376609538 1.1507894765762319 1.164228176512001 1.1639645488166876 1.195170347356742 0.9536853828718547 0.999092337399902 1.0 11.701265463939476 -8.781934623117534 24.99652970312882 0.9781291945028778 1.1040286564310429 0.36823445884511574 0.06970412031377152 179.13348142873605 218474.95479438218 0.012662428224365868 0.013487614147922395 1.6522104963962102e-09 8.781934623117534 0.12589946192816504 GTAS(ph)PKEFYAK ddPTM_A549_PD325901_60min_R1 2 GTASPKEFYAK 11 1 O00291;O00291-4 O00291 HIP1 Huntingtin-interacting protein 1 1 GT(0.389)AS(0.609)PKEFY(0.001)AK;GT(0.217)AS(0.778)PKEFY(0.005)AK 50.088 0.0075726 11536400.0 5435.8 5025.1 5306.5 5298.6 6725.3 6205.4 5892.3 6366.2 6253.4 6077.9 6370.5 True False 5987.638414375543 5448.582812589982 5666.631000576746 5625.882488006302 6252.93812902547 6154.865279793816 6116.534700890276 6239.2211468127125 5990.591344784285 5694.140356739096 5586.968885926746 1.071715009807565 0.9752305630902383 1.0142585570595648 1.006965065113854 1.1192004567586302 1.1016466004128944 1.094785889410889 1.1167452824963733 1.0722435487110444 1.0191823997950495 1.0 12.447850070544833 -4.90023900312873 20.384180656229365 1.046779220864437 3.7680595216488912 0.0028688626122126415 0.049373749299410775 3116.0496269544146 588442.4154250881 0.007470210067949304 29891.795906225412 1.2582327842174414e-05 4.90023900312873 2.7212803007844544 GTDDLNPVTSTPAKPS(ph)SPPPEFSFNTPGK ddPTM_A549_MK2206_60min_R1 1 GTDDLNPVTSTPAKPSSPPPEFSFNTPGK 29 1 B5MCR8;Q6NXT4-4;Q6NXT4-3;Q6NXT4;Q6NXT4-2 B5MCR8 SLC30A6 Zinc transporter 6 1 GTDDLNPVT(0.048)S(0.048)T(0.048)PAKPS(0.414)S(0.414)PPPEFS(0.026)FNT(0.002)PGK 56.533 0.0010933 2362000.0 1165.8 1584.8 1500.1 1305.8 2033.2 1761.5 1524.9 1595.3 1743.2 2086.4 1998.1 True False 1362.5585389265013 1665.459550771899 1712.8367368346487 1625.7210586195888 1734.1189733637536 1947.9007608109328 1801.9545913746854 1821.4386604013498 1348.3679833183849 1615.0807909322689 1501.9166252454033 0.9072131675111248 1.1088894834623553 1.1404339682003204 1.0824309627399966 1.154604020100257 1.2969433376454291 1.1997700545329923 1.2127428578824997 0.8977648696698263 1.0753465031178913 1.0 10.552589012505246 -8.764299009091074 24.999361816006928 0.9517222939775059 1.1430718495516203 0.27207266791410956 0.10130302244881899 50.7705982085737 443843.9167735982 0.017188785795545034 0.01869627457714867 1.7206834870269513e-09 8.764299009091074 0.19134955557411448 GTDDLNPVTSTPAKPSS(ph)PPPEFSFNTPGK ddPTM_A549_MK2206_60min_R1 2 GTDDLNPVTSTPAKPSSPPPEFSFNTPGK 29 1 B5MCR8;Q6NXT4-4;Q6NXT4-3;Q6NXT4;Q6NXT4-2 B5MCR8 SLC30A6 Zinc transporter 6 1 GTDDLNPVTSTPAKPS(0.279)S(0.721)PPPEFSFNTPGK;GTDDLNPVT(0.001)S(0.001)T(0.007)PAKPS(0.151)S(0.84)PPPEFSFNTPGK 127.21 1.2427999999999999e-27 14709000.0 2728.9 2451.9 2482.87 2249.84 2665.66 2966.2 2605.6 2380.0 3264.3 3383.6000000000004 3176.9 True False 3189.4716048005916 2576.6912370883524 2834.978300636386 2801.0509009991547 2273.5449451784493 3280.081315195792 3079.0037925673028 2717.372288444314 2524.9412620159515 2619.2424099877417 2387.9880520204806 1.3356313077454363 1.0790218296562286 1.1871827826934502 1.1729752578239163 0.9520755111210876 1.3735752624141104 1.2893715234304262 1.1379337874597575 1.05735087739639 1.096840667930309 1.0 11.221579902950767 -8.75197324508174 2.676771676458412 1.0241405454848709 1.1907534310683277 0.2359262007151509 0.113038456166019 0.23892592397271292 3.3859859193183746 0.019694377522149597 0.021437751224955198 1.7702180100813422e-09 8.75197324508174 0.16661288558345677 GTDDLNPVTSTPAKPSS(ph)PPPEFSFNTPGK ddPTM_A549_PD325901_60min_R1 2 GTDDLNPVTSTPAKPSSPPPEFSFNTPGK 29 1 B5MCR8;Q6NXT4-4;Q6NXT4-3;Q6NXT4;Q6NXT4-2 B5MCR8 SLC30A6 Zinc transporter 6 1 GTDDLNPVT(0.029)S(0.029)T(0.025)PAKPS(0.206)S(0.711)PPPEFSFNTPGK;GTDDLNPVTSTPAKPS(0.036)S(0.962)PPPEFS(0.001)FNTPGK 108.6 2.7124e-15 24488000.0 2926.6 2710.8 2381.9 2860.3 3545.3 3398.5 2569.0 3550.2 3873.0 3663.8 3001.3 True False 3223.7062775509494 2939.248629553428 2543.5500575282676 3036.9742347873816 3296.2903586210246 3370.8237427690856 2666.764700810741 3479.3884759219786 3710.2312787203 3432.4670427319825 2632.1591268082466 1.2247383696212972 1.1166682893969098 0.9663359755200567 1.1537958339433732 1.2523142408255927 1.2806306839269794 1.013147219577282 1.321876189203303 1.4095771190016626 1.3040499747042986 1.0 11.362030994296653 -6.520340287416936 23.21173098554313 1.2036677395840465 1.0966690119209792 0.1367066977667485 0.13014164614358587 84.61957650361889 773752.5437659204 0.02384712881048026 0.05043653374246683 3.0175863920022563e-07 6.520340287416936 -0.10699872766306728 GTDDS(ph)PKDSQEDLQER ddPTM_A549_MK2206_60min_R1 4 GTDDSPKDSQEDLQER 16 1 Q969E4;Q6IPX3-2;Q6IPX3;Q5H9L2 Q969E4 TCEAL3;TCEAL6;TCEAL5 Transcription elongation factor A protein-like 3;Transcription elongation factor A protein-like 6;Transcription elongation factor A protein-like 5 1 GT(0.017)DDS(0.979)PKDS(0.004)QEDLQER;GT(0.025)DDS(0.832)PKDS(0.143)QEDLQER;GTDDS(0.985)PKDS(0.014)QEDLQER;GTDDS(0.716)PKDS(0.284)QEDLQER 186.01 1.0736e-34 179334500.0 6074.59 7207.219999999999 6942.030000000001 6844.27 10153.77 7626.820000000001 6902.75 7316.130000000001 10429.9 10594.12 10171.3 True False 7099.832282533485 7574.036713474408 7926.514240522782 8521.11645725096 8660.163883617784 8433.885030126623 8156.890324356752 8353.213832208447 8067.54430312783 8200.900934064111 7645.485496400865 0.9286306652305799 0.9906547749047342 1.036757475277955 1.1145291507337634 1.1327160175366997 1.1031196166805757 1.0668897780522417 1.092568135292487 1.0552036632501167 1.0726461959707738 1.0 12.900392401815285 -5.530721735716084 2.3321057511296455 1.0525824209644143 0.9276763769795491 0.517608256906102 0.04040036479864896 0.31243022840617185 2.8477924280742393 0.00730300045205657 0.06222930294908161 2.946308809322192e-06 5.530721735716084 -0.12490604398486527 GTDDS(ph)PKDSQEDLQER ddPTM_A549_PD325901_60min_R1 3 GTDDSPKDSQEDLQER 16 1 Q969E4;Q6IPX3-2;Q6IPX3;Q5H9L2 Q969E4 TCEAL3;TCEAL6;TCEAL5 Transcription elongation factor A protein-like 3;Transcription elongation factor A protein-like 6;Transcription elongation factor A protein-like 5 1 GT(0.003)DDS(0.993)PKDS(0.004)QEDLQER;GT(0.001)DDS(0.997)PKDS(0.002)QEDLQER;GTDDS(1)PKDSQEDLQER 160.81 8.729999999999999e-21 208168500.0 6187.33 6271.1 6515.7 7050.200000000001 7446.7 7646.4 6626.5 8362.3 8174.4 7987.4 8128.4 True False 6815.463186728397 6799.587605427363 6957.894584087044 7485.6748418340685 6923.669481720362 7584.130253555838 6878.675083659932 8195.50736640256 7830.858395241725 7483.07420086179 7128.658330172976 0.9560653451268747 0.9538383368224034 0.9760454579000999 1.0500818660574562 0.9712443998634396 1.0638930780922713 0.9649326374003707 1.1496563570334135 1.0985038183267384 1.0497170511299023 1.0 12.799414860273178 -6.302181477363371 0.7378056943413209 1.0508880711413386 0.9401985431382407 0.3639043741610075 0.04979401176725892 0.9955723999759261 0.7852029240707162 0.009459585964739376 0.06826616287871151 4.986760636099283e-07 6.302181477363371 -0.11068952800309795 GTDDSPKDS(ph)QEDLQER ddPTM_A549_PD325901_60min_R1 1 GTDDSPKDSQEDLQER 16 1 Q969E4;Q6IPX3-2;Q6IPX3;Q5H9L2 Q969E4 TCEAL3;TCEAL6;TCEAL5 Transcription elongation factor A protein-like 3;Transcription elongation factor A protein-like 6;Transcription elongation factor A protein-like 5 1 GT(0.001)DDS(0.103)PKDS(0.896)QEDLQER 113.59 1.7327000000000002e-07 3607200.0 793.42 867.99 869.53 860.33 957.41 608.96 1016.2 879.32 891.33 928.15 1111.2 True False 873.9674143150675 941.1385635111695 928.5415347086584 913.4706301488047 890.1648244851932 604.0008316600442 1054.8720470859764 861.781272786805 853.8704997835697 869.5464506009298 974.5294444771681 0.8968096544111586 0.9657364062674241 0.95281013823735 0.9373453365884483 0.9134304043145292 0.6197871547986821 1.0824424578078418 0.8843050127122098 0.8761874816842178 0.8922731432372868 1.0 9.928561965570305 -10.854676791204435 1.0168956215112985 1.0019881166855014 0.9023358274243403 0.0 0.1095385863912628 1.0463097170881568 1.856990725267441 0.07734119011351243 0.01737637809737193 1.3974079471796544e-11 10.854676791204435 -0.0996522892611611 GTDS(ph)QAMEEEKPEGHV ddPTM_A549_MK2206_60min_R1 4 GTDSQAMEEEKPEGHV 16 1 Q13451 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed 1 GT(0.16)DS(0.84)QAMEEEKPEGHV;GT(0.13)DS(0.87)QAMEEEKPEGHV;GT(0.141)DS(0.859)QAMEEEKPEGHV;GT(0.206)DS(0.794)QAMEEEKPEGHV 90.22 2.9902999999999996e-06 17232900.0 2631.5099999999998 3183.4700000000003 2331.1800000000003 2381.11 3571.01 2811.07 2685.2200000000003 2707.59 3345.8399999999997 3583.5699999999997 3528.22 True False 3075.6445537574837 3345.495025300239 2661.7763776909524 2964.4820568920886 3045.719159488341 3108.5355615627523 3173.089715949331 3091.399174146612 2588.0125822085733 2774.0390481025443 2652.0656000817476 1.1597166200046785 1.2614676745541729 1.00366159027473 1.117801179880585 1.1484328138016118 1.1721186540283672 1.1964597390997882 1.1656571293150977 0.9758478757572212 1.0459918668742723 1.0 11.372900746289856 -8.761520031199844 24.99999993521701 0.9885948218106332 1.1525296050520748 0.5230915920070819 0.06133114390493865 1.0169514587641126 315177.09525759437 0.010083536520171478 0.01107422173454964 1.7317291554253615e-09 8.761520031199844 0.16393478324144162 GTDS(ph)QAMEEEKPEGHV ddPTM_A549_PD325901_60min_R1 4 GTDSQAMEEEKPEGHV 16 1 Q13451 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed 1 GT(0.185)DS(0.815)QAMEEEKPEGHV;GT(0.167)DS(0.833)QAMEEEKPEGHV;GT(0.151)DS(0.849)QAMEEEKPEGHV;GT(0.129)DS(0.871)QAMEEEKPEGHV 89.859 2.5172e-06 21458700.0 3029.19 2932.7 3476.39 3050.3199999999997 3962.6599999999994 3217.86 3461.58 3216.93 3525.29 3572.19 3312.5 True False 3336.7111388281824 3179.848921311544 3712.318730631298 3238.731338620649 3684.33643203486 3191.6548150380813 3593.312321149257 3152.765807517235 3377.1343208262024 3346.6413137662416 2905.0834996675835 1.1485766723090707 1.0945809033287341 1.2778698894734293 1.114849655437182 1.268237705544933 1.098644777474826 1.2369050051609274 1.0852582405559057 1.1624913091870281 1.151994878683929 1.0 11.50436391570156 -10.822712454925384 0.4644193448418709 0.9529905094782222 1.1742848737869114 0.04158368649813815 0.07902273739413687 1.1731626073166257 0.3113935221254447 0.12199787835319652 0.01515879339129806 1.5041375214206465e-11 10.822712454925384 0.2212943643086892 GTDTQTPAVLS(ph)PSK ddPTM_A549_MK2206_60min_R1 3 GTDTQTPAVLSPSK 14 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.909)PS(0.091)K;GTDTQTPAVLS(0.987)PS(0.013)K;GTDTQTPAVLS(1)PSK 273.23 3.012399999999999e-84 1113130000.0 32120.0 36824.0 29234.0 30916.0 40513.0 35358.0 31489.0 37180.0 44698.0 42738.0 44103.0 True False 37541.0707413958 38698.18431197904 33379.82078836349 38490.42138787196 34553.59136724657 39099.56009125913 37210.14369978191 42450.3788589746 34573.974368038784 33083.4561171699 33151.00791912218 1.1324262246560939 1.1673305501416484 1.0069021391385606 1.1610633825003522 1.0423089232021614 1.1794380486605267 1.1224438119819078 1.2805154812348358 1.042923776326445 0.9979623002076714 1.0 15.01676511407475 -8.976499934248753 24.605201939736965 1.0189368355871364 1.1337566319701897 0.3962702860613381 0.06801126165090633 101.32491208666094 106091.1995375616 0.011466462866472136 0.01183433396910398 1.0556016630317291e-09 8.976499934248753 0.11481979638305329 GTDTQTPAVLS(ph)PSK ddPTM_A549_PD325901_60min_R1 4 GTDTQTPAVLSPSK 14 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.998)PS(0.002)K;GTDTQTPAVLS(0.997)PS(0.003)K;GTDTQTPAVLS(0.94)PS(0.06)K;GTDTQTPAVLS(0.987)PS(0.013)K 273.23 3.012399999999999e-84 2561703000.0 73450.0 72190.0 71985.0 71992.0 84455.0 71610.0 74030.0 74077.0 80379.0 76931.0 86096.0 True False 80906.5899289678 78273.7046508271 76870.33498097009 76438.7823343052 78523.17215393293 71026.83190221981 76847.2521607703 72599.47612271788 77000.95015550203 72073.56353087336 75506.73780751102 1.0715148379899897 1.0366452971438112 1.0180592780598638 1.0123438590231542 1.0399492076337835 0.9406687928074471 1.017753572623898 0.9614966588517623 1.019789125995619 0.9545315507420036 1.0 16.204317767931048 -4.949447349916066 0.8269405983473402 1.003366885153522 1.1452300151267543 0.3779362524042492 0.029917545225912962 2.769195717602474 0.9716010572145821 0.0038728981614685157 0.4042631221330929 1.1234471583766972e-05 4.949447349916066 0.14186312997323225 GTDTQTPAVLS(ph)PSKTQATLK ddPTM_A549_PD325901_60min_R1 2 GTDTQTPAVLSPSKTQATLK 20 1 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.971)PS(0.028)KT(0.001)QATLK;GTDTQTPAVLS(0.954)PS(0.035)KT(0.01)QAT(0.001)LK 91.175 1.0022e-06 13424300.0 5916.4 5911.299999999999 6324.0 5955.700000000001 7478.299999999999 7664.7 7029.5 7939.4 6328.6 7105.0 9269.2 True False 6517.028572576522 6409.465996709157 6753.184669301295 6323.57006262392 6953.050006734445 7602.281224423186 7297.01146919 7781.042438661186 6062.630950299327 6656.389087453111 8129.147162300003 0.8016866274484616 0.7884549103052167 0.8307371652244264 0.7778884963419428 0.8553234266664694 0.9351880428096778 0.8976355481705212 0.9571781988087017 0.7457892973589629 0.8188299405284476 1.0 12.9888882901901 -6.94965718586702 5.277400980577479 0.8888065230658734 0.8018190514110053 0.30721438607386975 0.06483924355293633 0.28446313521448363 17.52325863455597 0.01336473181633551 0.025440111032057663 1.1229044789938412e-07 6.94965718586702 -0.08698747165486809 GTDTQTPAVLS(ph)PSKTQATLKPK ddPTM_A549_MK2206_60min_R1 6 GTDTQTPAVLSPSKTQATLKPK 22 2 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.989)PS(0.011)KTQATLKPK;GTDTQTPAVLS(0.987)PS(0.012)KTQAT(0.001)LKPK;GTDT(0.001)QT(0.001)PAVLS(0.827)PS(0.157)KT(0.007)QAT(0.008)LKPK;GTDTQTPAVLS(0.843)PS(0.15)KT(0.007)QAT(0.001)LKPK;GTDTQTPAVLS(0.889)PS(0.106)KT(0.004)QAT(0.001)LKPK;GTDTQT(0.002)PAVLS(0.764)PS(0.225)KT(0.007)QAT(0.001)LKPK 199.1 4.0903e-61 1569428500.0 21503.5 26140.8 26111.2 23950.299999999996 36517.7 25937.800000000003 27469.0 25041.2 43622.6 36674.1 39725.700000000004 True False 25132.765089900517 27471.255063615616 29814.160791171813 29818.124575169808 31145.994704704663 28682.520779881826 32459.761735504795 28590.866785458697 33742.15075097787 28389.39533873136 29860.712316456324 0.8416666295013256 0.919979897749329 0.9984410443799475 0.998573786826142 1.0430425896953575 0.9605437564888499 1.0870390964389731 0.957474372428222 1.129984790496189 0.9507273315474756 1.0 14.865960960399057 -3.7538154679522893 0.4834482769730091 1.053222782896476 2.7678861447166585e-15 0.4123785827054325 0.05775589048197533 8.568454373405277 0.4379705149900396 0.01103342249327905 7.150679195058979 0.00017627248704182277 3.7538154679522893 -1.0532227828964733 GTDTQTPAVLS(ph)PSKTQATLKPK ddPTM_A549_PD325901_60min_R1 6 GTDTQTPAVLSPSKTQATLKPK 22 2 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.979)PS(0.02)KT(0.001)QATLKPK;GTDTQTPAVLS(0.807)PS(0.159)KT(0.032)QAT(0.002)LKPK;GTDTQT(0.001)PAVLS(0.991)PS(0.008)KTQATLKPK;GTDTQT(0.001)PAVLS(0.984)PS(0.015)KT(0.001)QATLKPK;GTDTQTPAVLS(0.996)PS(0.004)KTQATLKPK;GTDTQTPAVLS(0.99)PS(0.009)KT(0.001)QATLKPK 194.21 5.2132999999999996e-52 2459034000.0 37506.6 37773.200000000004 39819.399999999994 46084.99999999999 44988.1 48259.99999999999 44029.0 47552.399999999994 52728.9 45349.799999999996 49000.1 True False 41314.24242110043 40956.48012905694 42521.783937504115 48931.56578337113 41828.291056519476 47866.986560552024 45704.54768859326 46603.93007786383 50512.887702689084 42486.40588855469 42973.39833722612 0.9613910935526728 0.9530658899177167 0.9894908381185485 1.138647807171063 0.9733531132045778 1.1138748251866035 1.0635544187111974 1.0844832357019512 1.1754455001742743 0.9886675834931684 1.0 15.391156249526158 -6.089820421850031 5.447940588010632 1.08051496089285 0.9601380315404544 0.33930753070546227 0.060545773907097304 0.1822044915536863 8.5185714943705 0.009630395823714815 0.02639045888572091 8.131666861794443e-07 6.089820421850031 -0.12037692935239552 GTDVNVFNTILTTR ddPTM_A549_PD325901_60min_R1 1 GTDVNVFNTILTTR 14 0 P04083 P04083 ANXA1 Annexin A1 0 131.08 2.5141e-08 23436000.0 12495.0 11614.0 12249.0 12885.0 15144.0 13774.0 13185.0 14660.0 15169.0 15157.0 15685.0 False True 13763.483201667164 12592.752539336541 13080.290799220676 13680.877186041818 14080.337683963791 13661.829110755149 13686.76239010884 14367.594799452485 14531.499681618441 14199.984433290203 13755.844435407116 1.0005553106024074 0.9154474375214063 0.9508897007843745 0.9945501528664911 1.0235894822800875 0.9931654268777586 0.9949779858573813 1.0444720327361905 1.056387323210403 1.0322873670146984 1.0 13.74775708520724 -6.468096982515743 2.5870934740226375 1.023460212460184 0.9513985756268271 0.534974264777661 0.026343236754472546 0.1738356307584457 2.284745545136298 0.004335922864582286 0.01105938349099437 3.403321814666806e-07 6.468096982515743 -0.07206163683335687 GTEAPAVVT(ph)EEEDDDEETAPPVIAPRPDHTK ddPTM_A549_MK2206_60min_R1 2 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK 31 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK 174.36 5.0994999999999995e-58 204573000.0 2085.59 2087.75 2196.2 2118.95 2957.7 2533.7 2310.25 1819.68 3323.7 3173.2 3103.3 True False 2437.586604220038 2194.007557498757 2507.6541840119003 2638.092845123281 2522.626248041499 2801.8144522660587 2729.992520639628 2077.6252125362817 2570.88725685826 2456.371916116888 2332.6649632771455 1.0449793016119593 0.9405583708071005 1.0750168684700068 1.130935169282537 1.0814353058647042 1.20112167686945 1.1703320295102644 0.8906659315607158 1.1021245216657423 1.0530324563481022 1.0 11.187763395015187 -3.1721690468327455 16.933034624011977 1.0578447162412674 0.5625613124182158 0.0 0.08871584778327021 0.0 0.0 0.011755209993733454 0.0 0.0006727147546513494 3.1721690468327455 -0.4952834038230516 GTEAPAVVT(ph)EEEDDDEETAPPVIAPRPDHTK ddPTM_A549_PD325901_60min_R1 3 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK 31 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK 175.02 4.5823e-58 341265000.0 4139.9 5052.7 4800.4 4849.6 5059.8 5038.4 5413.299999999999 4666.08 5448.1 6344.199999999999 5802.0 True False 4560.179600366697 5478.508761452191 5126.184011150211 5149.148777759284 4704.417103362386 4997.3689408761975 5619.306093771423 4573.011373931054 5219.135303278098 5943.6261292920535 5088.390781908324 0.8961928821544776 1.076668242724384 1.007427344097914 1.0119405129155927 0.9245392708612025 0.9821118611102447 1.1043385491835174 0.8987146565453086 1.0256946698816123 1.1680757992142627 1.0 12.312993756674272 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTKSIYT(ph)R ddPTM_A549_PD325901_60min_R1 2 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTKSIYTR 36 2 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 GTEAPAVVTEEEDDDEET(0.002)APPVIAPRPDHT(0.287)KS(0.287)IYT(0.424)R;GTEAPAVVTEEEDDDEETAPPVIAPRPDHT(0.238)KS(0.238)IYT(0.524)R 166.5 1.2342999999999998e-52 30127000.0 3415.7 3315.8 3433.5 3704.9 3997.6 4402.9 3845.1 3883.8 3822.7999999999997 3524.3999999999996 4019.8999999999996 True False 3762.4593494945616 3595.2341028011133 3666.517957312778 3933.743258561608 3716.822366971318 4367.044242176844 3991.4273846194546 3806.334562217841 3662.141010145097 3301.868782522134 3525.4777842456533 1.0672197017686258 1.0197863446671487 1.0400059741398435 1.1158042964106527 1.054274794633717 1.238709902439865 1.132166369748803 1.0796648837860376 1.0387644552775661 0.9365734191482461 1.0 11.783603074159851 -8.913149286542405 2.00613563449475 1.0145834448021873 1.0953988861766215 0.3500194444966751 0.060366971585499266 0.30913875687834513 2.458058963092521 0.01146846283679138 0.01176139013619949 1.221379744856876e-09 8.913149286542405 0.0808154413744342 GTEASS(ph)GTEAATGLEGEEK ddPTM_A549_MK2206_60min_R1 2 GTEASSGTEAATGLEGEEK 19 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 GTEAS(0.108)S(0.874)GT(0.017)EAATGLEGEEK;GT(0.001)EAS(0.175)S(0.812)GT(0.012)EAATGLEGEEK 129.32 1.8754999999999999e-16 5560000.0 1982.91 1665.73 1861.51 1675.4099999999999 2039.48 2424.5 1553.62 1696.1599999999999 2114.5299999999997 2456.9 2114.4700000000003 True False 2317.576730505015 1750.5085420919206 2125.500109316088 2085.885525212013 1739.4751936828184 2681.058980747151 1835.892643616985 1936.5958742721446 1635.5923312105463 1901.8845836088442 1589.3887425967914 1.4581559994683793 1.101372178609927 1.337306633897118 1.3123822192197172 1.0944302970466566 1.68684910676211 1.1550935239527669 1.2184532470691063 1.0290700364080005 1.1966138507445874 1.0 10.634256315845986 -8.580982621331296 1.8134880689719095 1.0100860343127567 1.308016108823752 0.24698872526324478 0.16830592688665597 0.22859092368690342 1.4742173925905573 0.02689855432840498 0.03091420902471378 2.6243235558565183e-09 8.580982621331296 0.2979300745109954 GTEASS(ph)GTEAATGLEGEEK ddPTM_A549_PD325901_60min_R1 2 GTEASSGTEAATGLEGEEK 19 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 GTEAS(0.028)S(0.968)GT(0.004)EAATGLEGEEK;GTEAS(0.114)S(0.884)GT(0.002)EAATGLEGEEK 125.45 9.4272e-15 7150000.0 2857.7 2119.4700000000003 2118.5 2756.8999999999996 3284.2 2517.5 2519.3 2652.9 2620.1 2614.0 2696.5 True False 3147.8116002724505 2298.0851751806126 2262.274149575395 2927.1874516258194 3053.5291218749253 2496.9983146744657 2615.173340113857 2599.9858283402123 2509.986308643184 2448.9515938919685 2364.8475945218543 1.331084340303504 0.9717688279380472 0.9566257693797817 1.2377911618518758 1.291216029713033 1.0558812840450003 1.10585280259577 1.0994306078594889 1.0613733901742939 1.0355642365981386 1.0 11.207531494986835 -9.028623505135661 0.6886397685188208 1.0109115312301724 1.1340369749837762 0.14800130419277602 0.11249122759920727 0.837456746024233 0.8634543724970158 0.03526975528025026 0.029967157760224232 9.362169396451638e-10 9.028623505135661 0.12312544375360379 GTEGLGFS(ph)ITSR ddPTM_A549_PD325901_60min_R1 2 GTEGLGFSITSR 12 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 GTEGLGFS(0.997)IT(0.003)SR;GTEGLGFS(0.996)IT(0.004)SR 78.529 0.00098007 7629100.0 3545.7 4020.2 4090.8 4345.4 4936.0 4441.2 4521.9 4622.3 4536.799999999999 4893.3 5319.2 True False 3905.656853793619 4358.996362893129 4368.42628797877 4613.8054888805655 4589.312388275571 4405.032339675167 4693.983378978624 4530.104600375799 4346.13407314698 4584.336202904199 4664.972121186962 0.8372304811973578 0.9344099492247384 0.9364313814735643 0.989031738887782 0.983781310810462 0.9442783847879341 1.0062189563062771 0.9710893190125117 0.9316527430910228 0.9827145980323145 1.0 12.187652743928725 -4.860274340365721 1.1623451852340374 0.9703287530662463 0.6445165468600624 0.7515997481534674 0.022763975285709705 1.6108006403099515 0.9471551593348349 0.004098548023530314 0.7969226562583902 1.3795125622083209e-05 4.860274340365721 -0.3258122062061839 GTEKRES(ph)PS(ph)PAPKPR ddPTM_A549_MK2206_60min_R1 3 GTEKRESPSPAPKPR 15 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 GT(0.022)EKRES(0.98)PS(0.997)PAPKPR;GT(0.009)EKRES(0.992)PS(0.999)PAPKPR;GT(0.057)EKRES(0.945)PS(0.998)PAPKPR 60.13399999999999 0.0017411999999999998 41826500.0 6006.200000000001 5145.7 5049.400000000001 5292.700000000001 7438.6 4878.61 5192.5 4963.42 7926.799999999999 9125.3 9643.0 True False 7019.899722508449 5407.5941509382665 5765.480847258767 6589.411737598333 6344.391793853836 5394.861272040779 6135.910037191329 5666.999984836249 6131.392456498497 7063.888392203903 7248.376966739115 0.9684788408109721 0.7460420692456099 0.7954168048536981 0.9090878920667897 0.8752844702981885 0.7442854168314328 0.8465219269565307 0.781830196034314 0.8458986728523965 0.9745476021208912 1.0 12.823442272317605 -10.37729493238546 0.7521383396564576 1.0003955400270164 0.8302900449718145 0.44422384463255415 0.0651864113613945 0.4331411960595043 0.446860644867603 0.04107824045705605 0.012427758229286497 4.1947401953429894e-11 10.37729493238546 -0.1701054950552019 GTEKRES(ph)PS(ph)PAPKPR ddPTM_A549_PD325901_60min_R1 3 GTEKRESPSPAPKPR 15 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 GT(0.002)EKRES(0.998)PS(1)PAPKPR;GT(0.008)EKRES(0.992)PS(1)PAPKPR;GT(0.03)EKRES(0.97)PS(0.999)PAPKPR 78.917 0.00014601 77525000.0 6713.1 7223.2 7508.2 8189.500000000001 9594.8 9333.1 9169.3 9000.0 9143.6 9880.2 9888.5 True False 7394.608970076981 7831.924413822604 8017.751602474389 8695.346815296036 8920.894348263062 9257.094327979446 9518.24272913348 8820.487939636583 8759.32628972552 9256.362485834525 8672.277188366155 0.852672119382535 0.9030989489506998 0.9245266760188648 1.002660157929549 1.0286680366063974 1.0674352453122489 1.0975482589396688 1.0170901768994713 1.0100376290412099 1.0673508566183654 1.0 13.0821951543486 -6.0540423923021285 1.7021565947529818 1.019347811492052 0.8685136194789375 0.7838355708260341 0.03333194886808183 0.15655726844806395 0.8403863397964372 0.005141415233178211 0.023149982031490265 8.829937055335885e-07 6.0540423923021285 -0.15083419201311454 GTEKRES(ph)PSPAPK ddPTM_A549_PD325901_60min_R1 2 GTEKRESPSPAPK 13 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 GT(0.306)EKRES(0.69)PS(0.004)PAPK;GT(0.114)EKRES(0.853)PS(0.032)PAPK 71.781 0.00042399 51824000.0 3974.3999999999996 4425.2 3969.3 5025.4 4601.3 4415.2 5334.1 5258.4 4706.2 4652.6 5083.200000000001 True False 4377.878162201358 4798.12713424075 4238.680567339917 5335.807544488517 4278.120561623257 4379.244075054897 5537.092094431517 5153.517086865002 4508.414780251346 4358.834041982314 4457.998625059705 0.9820277057942622 1.0762962346531657 0.9508034712063531 1.196906502952781 0.9596504892519929 0.9823341017733594 1.2420578291132514 1.156015853817358 1.0113091455228895 0.977755806715606 1.0 12.122180456302406 -8.961526611932257 24.993500737778525 1.004989232866503 1.0691765891105127 0.10384962801311082 0.09327664634798585 291.1552435328417 189144.49145650316 0.015888463671248576 0.016882269854765205 1.0926306728398623e-09 8.961526611932257 0.06418735624400962 GTEKRES(ph)PSPAPKPR ddPTM_A549_PD325901_60min_R1 1 GTEKRESPSPAPKPR 15 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 GT(0.166)EKRES(0.825)PS(0.009)PAPKPR 48.31399999999999 0.008031 64330000.0 1671.0 1462.9 1595.8 1648.3 1946.2 1749.3 1613.4 2173.0 1729.5 1891.1 2075.4 True False 1840.638689874816 1586.1837170479957 1704.1005843249552 1750.1117474390928 1809.5056260255096 1735.0542807785655 1674.7988198863566 2129.657810314477 1656.8151294982588 1771.6956232628543 1820.1389570445597 1.0112627295574963 0.8714629786417805 0.9362475198552856 0.961526448662374 0.99415795646926 0.9532537469533919 0.920148878416295 1.1700523204956268 0.9102684842197449 0.973384815706398 1.0 10.829832880682996 -6.327548779205523 4.067740597289676 0.9720511760736961 0.9326695219591115 0.0510511781280234 0.07217299920175028 0.5917050292889002 19.37704838280084 0.010233963059344016 0.02539162901802966 4.7038257020161196e-07 6.327548779205523 -0.03938165411458461 GTENGVNGTLTSNVADS(ph)PR ddPTM_A549_MK2206_60min_R1 4 GTENGVNGTLTSNVADSPR 19 0 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR 272.3 2.3523999999999994e-111 259313400.0 7258.22 7569.06 6259.879999999999 5504.99 9797.0 7833.9400000000005 6431.610000000001 7562.88 9604.5 9520.699999999999 10589.600000000002 True False 8483.230089558338 7954.292823930814 7147.625113110111 6853.712797128389 8355.874278007424 8662.922331051492 7600.150284891692 8634.941400348629 7429.0960852348735 7369.967257586681 7959.910061908179 1.065744464897221 0.999294308863583 0.8979529991569598 0.861028924174225 1.0497448103081108 1.0883191221603807 0.9548035374497379 1.08480389014328 0.9333140735831308 0.9258857449728427 1.0 12.958536414680749 -5.322105772733527 4.192412209807915 0.9767872382421683 1.0684299426842654 0.11417152139118125 0.07051143474619272 0.3290525776607727 10.604849333914927 0.009539776536532738 0.0759638061127951 4.763149658248746e-06 5.322105772733527 0.0916427044420971 GTENGVNGTLTSNVADS(ph)PR ddPTM_A549_PD325901_60min_R1 2 GTENGVNGTLTSNVADSPR 19 0 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR 386.03 0.0 327330000.0 22323.3 20906.1 21891.4 23097.0 25555.0 22186.8 23617.0 24078.0 25664.0 22282.3 23726.0 True False 24589.544982455103 22667.93041696433 23377.082047682226 24523.649232907086 23760.104959963985 22006.118056810083 24515.757858718294 23597.745401174398 24585.431328964045 20875.3917752789 20807.852411505828 1.1817435310555242 1.0893930795294358 1.1234740416918627 1.178576661729232 1.1418816555439277 1.0575871849533913 1.1781974119136946 1.1340788532374384 1.1815458338876617 1.003245859420635 1.0 14.344840451054498 -10.86235882920706 1.0530963522783094 0.998142773866661 1.141228616752254 0.659457601057746 0.0384446875737435 0.2639070770760039 0.5084706713173812 0.028486640770536382 0.006559719211848105 1.3729071626146038e-11 10.86235882920706 0.14308584288559312 GTENTFPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 GTENTFPSPK 10 0 J3QSD2;J3QRZ1;A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2 J3QSD2 NDEL1 Nuclear distribution protein nudE-like 1 1 GT(0.001)ENT(0.032)FPS(0.967)PK 55.261 0.017539 11330000.0 6582.1 7348.5 7578.2 7106.5 9535.0 7212.9 7069.9 7546.3 12153.0 10226.0 10860.0 True False 7692.997563105265 7722.50726201874 8652.902712539382 8847.592819022908 8132.414130938124 7976.164290464482 8354.409315732102 8616.011134574508 9400.364904353102 7915.939497734559 8163.162279247826 0.9424040953665958 0.9460190791074549 1.0599939602495176 1.0838437992976109 0.996233304293378 0.9770924572627051 1.0234280576499697 1.055474684911986 1.1515592343729906 0.9697148270417519 1.0 12.994912422252469 -8.237268784383785 3.490106146250399 1.0727305128367661 1.0047744520195718 0.029486970039811156 0.06019145206532897 0.32630764155209535 8.439066738351643 0.011198936574192762 0.014297915324935906 5.790701995832468e-09 8.237268784383785 -0.0679560608171943 GTENTFPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GTENTFPSPK 10 0 J3QSD2;J3QRZ1;A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2 J3QSD2 NDEL1 Nuclear distribution protein nudE-like 1 1 GTENT(0.024)FPS(0.976)PK;GTENT(0.003)FPS(0.997)PK 103.46 0.0003715 30446000.0 21131.0 21349.0 22640.0 22707.0 25839.0 24713.0 24046.0 24783.0 22978.0 23555.0 25317.0 True False 23276.203564179992 23148.15515432203 24176.486545379717 24109.559818661335 24024.157779710786 24511.745521569042 24961.083688476087 24288.6836231126 22012.31456814745 22067.73328007856 22203.1694976858 1.048327968068074 1.042560845051186 1.0888754665364146 1.085861179466933 1.0820147899251402 1.1039750664482322 1.124212635095982 1.0939286675104727 0.9914041583316181 0.9939001403551254 1.0 14.438478015233287 -8.763336092434843 24.999837680311288 0.9959408470135805 1.0845589988251563 0.7677201316956448 0.021704091911199947 17.60111066661571 231992.89183662017 0.004088689328706134 0.0044607240837134165 1.724502814756191e-09 8.763336092434843 0.08861815181157573 GTEPS(ph)PGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_A549_MK2206_60min_R1 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 2 GT(0.133)EPS(0.518)PGGT(0.24)PQPS(0.376)RPVS(0.732)PAGPPEGVPEEAQPPR 42.931000000000004 0.012536 6661700.0 1211.8 1824.6 1591.7 1206.1 2209.9 1481.8 1401.2 1428.8 2227.8 2130.1 2061.6 True False 1416.3222143344772 1917.4643465032843 1817.4269942135252 1501.5945541438866 1884.8266374368293 1638.6030924607664 1655.7799025734214 1631.336775516486 1723.2068570655686 1648.9089305813004 1549.64782273456 0.9139639300981226 1.2373549127566696 1.172800017881762 0.9689908456065347 1.2162935408838904 1.057403539321104 1.0684878707805863 1.0527145275097247 1.1119990179605717 1.0640539781945946 1.0 10.597724666533002 -11.173263877964816 0.564857226024217 0.9665841727393962 1.0969994802014431 0.027726770145258706 0.09442888717611937 2.9642111179470634 0.9961053345238241 0.22024119935701003 0.018249410775793482 6.7102101568295404e-12 11.173263877964816 0.13041530746204688 GTEPSPGGT(ph)PQPSRPVSPAGPPEGVPEEAQPPR ddPTM_A549_MK2206_60min_R1 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GTEPS(0.007)PGGT(0.38)PQPS(0.329)RPVS(0.285)PAGPPEGVPEEAQPPR 83.594 2.019e-06 26142000.0 1171.1 1032.9 1553.1 1224.8 1815.2 1692.0 1352.6 1338.5 2308.0 2401.6 1995.4 True False 1368.7530493539407 1085.4701981273938 1773.352933789675 1524.8760549833605 1548.1864845808996 1871.0463169412994 1598.3499116620096 1528.2364739843324 1785.241685118651 1859.076892016361 1499.887109761613 0.9125707131195265 0.7237012646237855 1.1823242711056607 1.0166605506901911 1.0322020067410027 1.2474580951886955 1.06564680852284 1.0189009986406412 1.190250701869417 1.2394778779796545 1.0 10.550638203839203 -5.76190863549749 24.999964738472332 1.0915826581101438 0.8181359595572869 0.5642236844480787 0.09791349361211638 6.239923950926205 332538.17675041896 0.0128479166716686 0.043889669790696036 1.7301803068198772e-06 5.76190863549749 -0.27344669855285686 GTEPSPGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_A549_MK2206_60min_R1 1 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GTEPSPGGT(0.009)PQPS(0.193)RPVS(0.798)PAGPPEGVPEEAQPPR 87.75299999999999 2.081e-09 42114000.0 418.66 773.51 241.65 487.68 774.3 720.33 835.26 677.04 800.26 1078.0 1178.6 True False 489.3195727457273 812.8783550716629 275.91960366381755 607.1616218927875 660.4014957090078 796.5548424836446 987.0159302194375 773.0124933480406 619.0023877526224 834.4790512964847 885.9210922947968 0.5523286182048622 0.9175516444315241 0.3114494124404516 0.6853450348721914 0.7454405380487931 0.8991261743417043 1.114112688820598 0.8725523075037195 0.6987105207634505 0.9419338342367919 1.0 9.79103439552499 -6.9362085987488005 2.627344154729704 0.878774940168382 0.61440349516715 0.41835193780339053 0.16482502645789554 0.2622626390981173 3.6703104924491625 0.026466720972466003 0.053339765072121036 1.1582209100682486e-07 6.9362085987488005 -0.264371445001232 GTEPSPGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_A549_PD325901_60min_R1 2 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GTEPSPGGTPQPS(0.011)RPVS(0.989)PAGPPEGVPEEAQPPR;GTEPSPGGTPQPS(0.002)RPVS(0.998)PAGPPEGVPEEAQPPR 180.14 3.753999999999999e-64 94598000.0 1968.12 2196.58 2928.4 2310.4 2861.8 2681.8999999999996 2939.0 2584.7 2954.4 2893.8 2771.3 True False 2167.9220935466315 2381.693505498181 3127.1388338997344 2453.108160700893 2660.797040674033 2660.0594955811093 3050.845253282509 2533.1461308420758 2830.2368422027525 2711.084974141003 2430.4476687181227 0.8919846830892871 0.9799402538686809 1.2866513746206532 1.0093235876972089 1.0947765199476203 1.0944730593537484 1.255260622373984 1.042254957161089 1.164491989945 1.115467330992111 1.0 11.247006355676614 -5.532995093813976 24.96143013015179 1.0979315629912987 0.9139734873053463 0.3853088389942162 0.0884989294393935 142.11496893612923 350660.4636377839 0.012631012310478744 0.04902927666015154 2.930926355476906e-06 5.532995093813976 -0.18395807568595235 GTFS(ph)DQELDAQSLDDEDDNMHHAVYPAVNR ddPTM_A549_MK2206_60min_R1 2 GTFSDQELDAQSLDDEDDNMHHAVYPAVNR 30 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 GT(0.176)FS(0.824)DQELDAQSLDDEDDNMHHAVYPAVNR;GT(0.027)FS(0.973)DQELDAQSLDDEDDNMHHAVYPAVNR 157.88 4.5908999999999994e-46 18315800.0 1027.8 1091.71 872.47 801.3599999999999 1047.98 1012.42 950.39 1300.78 1333.85 1250.74 1702.1799999999998 True False 1201.2675127025707 1147.273375929575 996.1993652330679 997.6932359744175 893.8235302507109 1119.5536124099947 1123.0635609525793 1485.1695484716786 1031.7351047207596 968.1969653233447 1279.4817282219221 0.9388703927581329 0.8966703866290648 0.7785960074767713 0.7797635667379931 0.6985824889370206 0.8750055492905106 0.877748807334111 1.16075870074018 0.8063695494538616 0.7567102710164016 1.0 10.321343829623 -7.694717165187742 3.269100818740223 0.9276629646797778 0.8171458226651891 0.14829491974697984 0.11464271153535796 0.34461771460771906 7.463323181344 0.017973451291030833 0.026918550663566795 2.0196812553592622e-08 7.694717165187742 -0.11051714201458873 GTFS(ph)DQELDAQSLDDEDDNMHHAVYPAVNR ddPTM_A549_PD325901_60min_R1 2 GTFSDQELDAQSLDDEDDNMHHAVYPAVNR 30 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 GT(0.185)FS(0.815)DQELDAQSLDDEDDNMHHAVYPAVNR;GT(0.05)FS(0.95)DQELDAQSLDDEDDNMHHAVYPAVNR 178.33 4.9502000000000004e-58 28256000.0 3305.3 3111.5 3367.3 3956.1 4125.4 3224.6 3306.3999999999996 3075.8999999999996 3442.5 3878.3999999999996 3674.2 True False 3640.851622766744 3373.717024810201 3595.8252272198397 4200.459312045016 3835.6461358573806 3198.339926712723 3432.2268613315014 3014.54876150313 3297.8236966162244 3633.517162108114 3222.2966926727972 1.1298933555825885 1.0469914308268757 1.1159199695659345 1.3035606937115598 1.1903454280232117 0.9925653134254987 1.0651492362997068 0.9355279941657556 1.0234388733089566 1.127617196259548 1.0 11.653873620836107 -7.2655530305297065 24.966985650718904 1.0083813435631777 1.1570335977693074 0.43747693627596373 0.07410716399503085 206.3032263447997 1252114.6396212566 0.00999236505532171 0.016311773595052474 5.4255899686592854e-08 7.2655530305297065 0.1486522542061297 GTGAS(ph)GSFK ddPTM_A549_MK2206_60min_R1 2 GTGASGSFK 9 0 P10412;Q02539;P22492;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2;Histone H1.5 1 GTGAS(0.967)GS(0.033)FK;GTGAS(0.932)GS(0.068)FK 104.79 0.00059487 23657000.0 9088.4 10633.400000000001 8693.7 8301.099999999999 11236.099999999999 8864.5 8542.2 9521.8 11926.0 13418.599999999999 13718.1 True False 10622.299729953338 11174.594641076415 9926.597386187175 10334.869872650532 9583.284574371664 9802.535506221126 10094.207167972225 10871.544309289524 9224.780041908598 10387.328940377554 10311.517169700697 1.0301393631158218 1.0837003379009813 0.9626708875930917 1.0022647203670916 0.9293767751782572 0.9506394980386436 0.9789255064844371 1.0543108381019242 0.8946093858054796 1.0073521451236702 1.0 13.331968996656208 -5.772209651163215 24.737383056297478 0.9608841745531989 1.0569198456052251 0.29358564731314596 0.04409009584736876 128.2458269156528 294560.65321764967 0.006765919188413777 0.02134585738124674 1.6896250857275868e-06 5.772209651163215 0.09603567105202626 GTGAS(ph)GSFK ddPTM_A549_PD325901_60min_R1 2 GTGASGSFK 9 0 P10412;Q02539;P22492;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2;Histone H1.5 1 GTGAS(0.966)GS(0.033)FK;GT(0.005)GAS(0.745)GS(0.249)FK 93.44200000000001 0.00097643 38054000.0 14306.4 13677.2 13506.6 14468.099999999999 15693.7 14462.7 14306.3 14869.6 15201.6 15125.099999999999 17099.7 True False 15758.775196184964 14829.825644137576 14423.239097783831 15361.761677560844 14591.428652325845 14344.920566292907 14850.734075207738 14573.014163024469 14562.729616988003 14170.09860473429 14996.5453039293 1.0508270322802913 0.988882795576389 0.9617707815682552 1.0243533671408875 0.9729860015494829 0.9565483433397385 0.9902770120873533 0.9717580861244182 0.9710722917745841 0.9448908610319425 1.0 13.87234257047556 -5.267536153357039 4.900115312490178 0.9835689074988665 1.054065204908886 0.47089790567544376 0.02151221041507056 0.09972365373595987 7.096739372347535 0.0025180557286456026 0.023627279069551387 5.4008715270034245e-06 5.267536153357039 0.07049629741001961 GTGASGS(ph)FK ddPTM_A549_PD325901_60min_R1 2 GTGASGSFK 9 0 P10412;Q02539;P22492;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2;Histone H1.5 1 GTGAS(0.001)GS(0.999)FK;GTGAS(0.001)GS(0.999)FK 129.16 5.0579e-05 216168000.0 111124.0 42470.0 10837.9 13365.2 66179.0 30766.0 19258.9 11490.7 11648.9 15472.5 20381.9 True False 122405.22667483479 46049.09594847795 11573.425067587059 14190.738049428488 61530.81534515574 30515.451896434784 19991.80797837445 11261.508974220233 11159.337243140946 14495.563709446638 17875.055511509356 6.847823582758708 2.5761651995333916 0.6474623287259267 0.7938849778839223 3.442272685840746 1.7071528464225778 1.1184193506701092 0.6300125315397871 0.6242966482512848 0.8109381087019989 1.0 14.125660101779212 -5.292610637223693 2.5067017137383685 1.0502793571818319 7.893243342913519 0.8075506142622176 0.7930560365228657 0.14838953873918484 1.2156133191892695 0.11593002053557694 2.088410871390059 5.097877117848087e-06 5.292610637223693 6.8429639857316875 GTGASGS(ph)FKLNK ddPTM_A549_MK2206_60min_R1 1 GTGASGSFKLNK 12 1 P10412;Q02539;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1.3;Histone H1.2;Histone H1.5 1 GT(0.036)GAS(0.027)GS(0.938)FKLNK 71.344 0.00071072 8770000.0 2400.5 11687.0 4170.6 2671.9 3624.1 2679.3 4166.4 5514.7 4007.2 3737.7 4061.9 True False 2805.6457134097313 12281.818380786972 4762.053792842198 3326.5156199461508 3090.9996908162384 2962.8217476246014 4923.380949244861 6296.42561306044 3099.575598183475 2893.350974054611 3053.2181272630514 0.918914272241909 4.022581377700836 1.5596834534422772 1.0895112898232682 1.01237434142547 0.9703930817024584 1.612521852036248 2.0622259369017457 1.0151831506915554 0.9476397864335531 1.0 11.576114946555085 -5.9852824226559 24.998467130205174 1.1348462539384234 2.5508444929842837 0.2909255648093718 0.7403353823996368 166.87974989482532 283448.94886137155 0.09011645322175964 0.2800350571960052 1.0344692302834547e-06 5.9852824226559 1.4159982390458603 GTGASGS(ph)FKLNK ddPTM_A549_PD325901_60min_R1 2 GTGASGSFKLNK 12 1 P10412;Q02539;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1.3;Histone H1.2;Histone H1.5 1 GTGAS(0.029)GS(0.971)FKLNK;GTGAS(0.031)GS(0.968)FKLNK 103.79 5.273e-05 41241000.0 43319.0 17657.0 7586.1 7898.1 26762.0 20332.4 11661.900000000001 8036.099999999999 8789.0 9452.1 10227.400000000001 True False 47716.71299023769 19145.01735724688 8100.938364925141 8385.94769911345 24882.329443887935 20166.81967558574 12105.699986136544 7875.81368130151 8419.628894570807 8855.292792894521 8969.494636830272 5.3198886807183925 2.1344588666828765 0.9031655285974874 0.934940934651917 2.774106061864049 2.248378586768684 1.3496524025365353 0.8780666024328816 0.9386960174989545 0.9872677504631289 1.0 13.13081098714468 -5.280282404718971 2.6642168322558337 1.1904842941685188 6.047968801320544 0.7769820091090068 0.6089352644469781 0.15571840131106138 1.482964252535444 0.09226057436904155 1.636818592644352 5.2446630941094e-06 5.280282404718971 4.857484507152026 GTGASGS(ph)FKLNKK ddPTM_A549_PD325901_60min_R1 1 GTGASGSFKLNKK 13 2 P10412;Q02539;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1.3;Histone H1.2;Histone H1.5 1 GT(0.074)GAS(0.391)GS(0.535)FKLNKK 53.395 0.004531800000000001 24033000.0 12420.0 6101.9 3031.6 2678.3 7552.6 7500.2 3830.1 2963.3 3228.0 3279.3 3789.8 True False 13680.869256879248 6616.128527619913 3237.342606491748 2843.732508139372 7022.131431055531 7439.120857883388 3975.856551411141 2904.194656836123 3092.338385672382 3072.244438351161 3323.6786255215734 4.116182940139815 1.990604168771482 0.9740239569593534 0.8555979168091544 2.112758850129071 2.238219062685699 1.1962217167693894 0.8737892510231424 0.9303963271079232 0.9243506320858698 1.0 11.69856517586148 -5.3022530368551175 2.38292507740551 1.12991457562661 4.6676254086466855 0.7514087368141497 0.47637372073551265 0.19007279062865878 1.3766489729800773 0.07233322696961975 1.3275529074890882 4.985939026169507e-06 5.3022530368551175 3.5377108330200757 GTGASGSFK ddPTM_A549_MK2206_60min_R1 4 GTGASGSFK 9 0 P10412;Q02539;P22492;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2;Histone H1.5 0 ;;; 131.44 0.00013485 60955000.0 18025.600000000002 19809.600000000002 17958.399999999998 16412.9 23614.5 18062.4 17374.199999999997 17404.0 25196.699999999997 24966.399999999998 26130.0 False True 21067.88059639178 20817.82402635728 20505.171158437002 20434.061236803078 20140.838331939005 19973.75117914924 20530.867244712477 19871.070297514627 19489.68768086183 19326.472900082143 19641.199848687447 1.0726371483766393 1.0599059215696776 1.0439877052525022 1.0403672583255454 1.025438287227903 1.0169313144320975 1.0452959800256034 1.0117034830151959 0.9922860024340242 0.9839761852111933 1.0 14.261595443768128 -6.17607752323196 0.3231625515644741 0.9934534587850995 1.0999264403535314 0.8359350696441559 0.01098372343336961 1.2022149478456503 0.13426316091914087 0.004648784037513715 0.04630675579668889 6.666877522687382e-07 6.17607752323196 0.10647298156843188 GTGASGSFK ddPTM_A549_PD325901_60min_R1 2 GTGASGSFK 9 0 P10412;Q02539;P22492;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2;Histone H1.5 0 ; 126.07 0.0001827 112433000.0 22431.0 21939.0 22490.0 22832.0 25106.0 23194.0 23696.0 25086.0 24660.0 25651.0 28197.0 False True 24708.178607170554 23787.876524927186 24016.306643356464 24242.280784765742 23342.641170998086 23005.11575394619 24597.764246948733 24585.6400504137 23623.62595746 24031.391482372943 24728.947755509995 0.9991601280998779 0.9619445501730609 0.9711819071640546 0.9803199482826431 0.943939928288982 0.9302909279194984 0.9946951439317901 0.9942048603720162 0.9553025139210094 0.9717919144787863 1.0 14.59391323228964 GTGDS(ph)LRESK ddPTM_A549_MK2206_60min_R1 2 GTGDSLRESK 10 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 GT(0.281)GDS(0.719)LRESK;GT(0.018)GDS(0.982)LRESK 58.098 0.0033104999999999996 11613200.0 4102.6 4721.2 3721.8 3554.0 5221.799999999999 3744.5 3451.0 4291.3 5942.1 6525.799999999999 7451.0 True False 4795.018581060097 4961.488914124362 4249.607204287176 4424.730159545123 4453.680137276634 4140.740504602067 4078.0020295324543 4899.604916555074 4596.223837583858 5051.617247635064 5600.71106286147 0.8561446086472929 0.885867679735201 0.7587620851335259 0.7900300711610849 0.7951990537075119 0.7393240711986512 0.7281221944431024 0.8748183688754347 0.8206500542514314 0.9019599816767074 1.0 12.451394287143186 -10.417738319687501 0.6054203615427131 1.0133626248469354 0.7985466120175002 0.47850277053295753 0.05611679523852509 0.4328635562672282 0.26521429803812235 0.04806682069750753 0.011450664612724629 3.821744773417323e-11 10.417738319687501 -0.2148160128294352 GTGIVSAPVPK ddPTM_A549_MK2206_60min_R1 1 GTGIVSAPVPK 11 0 H0YEN5;P15880;I3L404;E9PM36;E9PMM9;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 0 89.029 0.00083945 5420600.0 5421.6 5616.3 6029.3 4983.8 8554.4 6060.7 6498.7 6948.7 9448.9 8608.4 9782.6 False True 6336.633534606208 5902.1456808431485 6884.3454019046385 6204.831223731286 7296.059091945154 6702.03925123294 7679.429669464669 7933.699504501262 7308.7392367927305 6663.756461206546 7353.310433975122 0.8617388850236112 0.8026515042222298 0.9362239584087618 0.8438146708811013 0.9922142084787493 0.9114315669670278 1.0443499888135759 1.078928949856995 0.9939386215796826 0.9062253689736025 1.0 12.844178176986695 -6.825901173923731 1.0493756781306958 1.0056706553600046 0.8467820898861321 0.5236715500102236 0.057196261052323095 0.2397997957151754 0.5106896906843741 0.007479457605982137 0.022683616883916704 1.4931341417351338e-07 6.825901173923731 -0.15888856547387242 GTGIVSAPVPK ddPTM_A549_PD325901_60min_R1 1 GTGIVSAPVPK 11 0 H0YEN5;P15880;I3L404;E9PM36;E9PMM9;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 0 137.95 6.6814e-08 8975600.0 6387.2 6632.0 6675.0 7136.2 8443.8 8107.2 7179.8 7512.9 7535.0 7182.2 7762.0 False True 7035.623841991879 7190.901915006024 7128.005640035761 7576.9868665139 7850.736617528622 8041.177651133596 7453.03121793731 7363.049315743967 7218.330153668339 6728.714666278082 6807.3232073720155 1.0335375047820008 1.0563479499869508 1.0471084481953876 1.1130640687529534 1.1532780769137916 1.1812539828321025 1.0948549071191482 1.0816365098942453 1.0603771752531483 0.98845235657258 1.0 12.732871894261724 -9.51916313515238 0.8476359302522533 1.0101215201171447 1.0977336489248684 0.43894961581818837 0.042526762134073144 0.40867373800537793 0.6255862585181836 0.015248835038036937 0.010174574375825633 3.0257766343528405e-10 9.51916313515238 0.08761212880772362 GTGLQPGEEELPDIAPPLVT(ph)PDEPK ddPTM_A549_PD325901_60min_R1 2 GTGLQPGEEELPDIAPPLVTPDEPK 25 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 GTGLQPGEEELPDIAPPLVT(1)PDEPK;GTGLQPGEEELPDIAPPLVT(1)PDEPK 79.021 3.8347e-06 3601700.0 1411.26 1828.79 1415.5900000000001 1447.35 1488.71 1724.16 1667.5 1847.1599999999999 1477.37 1661.03 1305.53 True False 1554.5300762852985 1982.9085514390633 1511.660450034192 1536.7495223296564 1384.1481453706897 1710.1190126034267 1730.9576249910112 1810.3169447310124 1415.2812765925664 1556.1522823268472 1144.9580864365353 1.3577178891530242 1.7318612575683796 1.3202757969411338 1.3421884526030972 1.208907261992959 1.4936083974268852 1.511808725137082 1.5811207119077 1.2360987649751973 1.3591347148523802 1.0 10.161079071109258 -9.372437500758709 1.1544776146443303 1.0559784886741346 1.4391114844507344 0.20187703359629616 0.16923199189916582 0.22342416665780038 0.6209827961601627 0.03724008726539199 0.02988553107860832 4.24192024916694e-10 9.372437500758709 0.38313299577659987 GTGNAS(ph)PDAR ddPTM_A549_MK2206_60min_R1 2 GTGNASPDAR 10 0 B1AM27;O14795;O14795-2;A0A0U1RRB5;I6L9J0;F8W8M9;A0A1B0GVW8;A0A1B0GUS7 B1AM27 UNC13B Protein unc-13 homolog B 1 GT(0.001)GNAS(0.999)PDAR;GT(0.02)GNAS(0.98)PDAR 67.252 0.0046743999999999996 50244000.0 1826.85 1820.95 1409.83 1279.8200000000002 1589.92 753.8199999999999 1141.39 1210.43 1503.97 2315.7 2747.0 True False 2135.177617805695 1913.6285770936965 1609.7650934548299 1593.3759574533026 1356.0448741542882 833.5887320547811 1348.7657886085335 1382.0121592864077 1163.3231963465769 1792.5817616765032 2064.844086656886 1.0340623931866368 0.9267666210052611 0.7796061232212173 0.771668896334483 0.6567299114335607 0.4037054116780383 0.6532046643736047 0.6693058174304936 0.5633951753858913 0.8681438822719092 1.0 11.011817134636601 -5.63069564280132 1.7718305477900853 0.7319434581707004 1.04911240501753 0.3385470476354623 0.14886399031482586 0.6090829283427232 3.0519681964793177 0.028217796002317663 0.2540311296564784 2.3404768897957805e-06 5.63069564280132 0.3171689468468296 GTGNAS(ph)PDAR ddPTM_A549_PD325901_60min_R1 2 GTGNASPDAR 10 0 B1AM27;O14795;O14795-2;A0A0U1RRB5;I6L9J0;F8W8M9;A0A1B0GVW8;A0A1B0GUS7 B1AM27 UNC13B Protein unc-13 homolog B 1 GTGNAS(1)PDAR;GT(0.001)GNAS(0.999)PDAR 138.42 3.0068e-07 71348000.0 4112.5 3777.9 4001.2 3625.4 4109.9 3669.4 2965.5 3793.2 3637.4 4772.0 5215.4 True False 4529.997972537513 4096.276891541204 4272.745493170201 3849.3327241192096 3821.2348023852837 3639.517622985692 3078.3537252838646 3717.5416502921657 3484.53272739923 4470.695105605384 4573.93886314455 0.9903932055233402 0.8955687896372633 0.9341501102252862 0.841579400008163 0.8354363529376544 0.795707536082708 0.673020304247687 0.8127659248458741 0.7618231969553785 0.9774278230146289 1.0 12.159221366977558 -5.580361585287648 1.207363444554283 0.8526596293276614 0.9968544027160762 0.19668528619944492 0.08912037652691511 1.6440218289891233 2.8739930021634827 0.01639985602178915 0.25520081738933187 2.6280789924074024e-06 5.580361585287648 0.1441947733884148 GTGPPS(ph)PTKDR ddPTM_A549_MK2206_60min_R1 1 GTGPPSPTKDR 11 1 Q7L8A9 Q7L8A9 VASH1 Vasohibin-1 1 GTGPPS(0.908)PT(0.092)KDR 78.763 0.00028541 8004900.0 1202.1 1442.1 1344.2 1483.2 1525.3 1392.2 1537.5 1628.2 2068.6 2285.3 2568.4 True False 1404.9850914767076 1515.4967302928799 1534.8277725839173 1846.584066583379 1300.9303905526926 1539.5216799324323 1816.8438482776444 1859.0023361533742 1600.0654028754088 1769.0491427902189 1930.5953957661263 0.7277470435068356 0.7849893010293225 0.7950022961568523 0.9564842382992378 0.6738493178869511 0.7974336224507038 0.9410795510349068 0.9629165905141188 0.8287937526342479 0.9163230921765457 1.0 10.914830128037119 -7.754366386731267 23.026195869000453 0.9225725609012846 0.7916745986628275 0.4635618224542909 0.07508744094836776 53.33318002537878 173624.162164306 0.01323797402742192 0.019377762624063738 1.7604902057282317e-08 7.754366386731267 -0.13089796223845707 GTGPPSPT(ph)KDR ddPTM_A549_MK2206_60min_R1 1 GTGPPSPTKDR 11 1 Q7L8A9 Q7L8A9 VASH1 Vasohibin-1 1 GTGPPS(0.396)PT(0.604)KDR 60.157 0.0033520000000000004 7170300.0 1972.8 1579.6 1648.1 1085.2 1766.1 1476.8 1253.5 1457.3 1948.2 2303.0 2411.4 True False 2305.7604096707832 1659.9948929828943 1881.82536229397 1351.0740487164799 1506.3090295385227 1633.0739957794985 1481.2447244331877 1663.8767377940749 1506.9358106361158 1782.7507004970348 1812.5828287456927 1.2720855417494876 0.9158173997111132 1.038201031395731 0.745386101694135 0.8310290738994193 0.900965169635633 0.8172011236905565 0.9179590093245436 0.8313748683578313 0.9835416468833583 1.0 10.823831207453285 -4.49960938229925 1.3811865336457714 0.8973886887970013 3.1193713183511647 0.6228290949705633 0.08362745629362639 4.781650261978959 1.6768453342216638 0.012844213523453654 24.740501473173584 3.1651231886146826e-05 4.49960938229925 2.221982629554163 GTGQS(ph)DDSDIWDDTALIK ddPTM_A549_PD325901_60min_R1 3 GTGQSDDSDIWDDTALIK 18 0 B4DP61;Q16637-2;Q16637;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-3 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GTGQS(0.989)DDS(0.011)DIWDDTALIK;GT(0.198)GQS(0.802)DDSDIWDDTALIK;GTGQS(0.927)DDS(0.073)DIWDDTALIK 325.79 2.0689999999999994e-173 121138700.0 12186.0 13108.27 11760.99 12374.21 12055.09 12565.099999999999 11193.48 11567.99 14729.2 13367.84 15938.6 True False 13423.113749140937 14212.949916377569 12559.161505978156 13138.536847830079 11208.382066202781 12462.77399154562 11619.454006707281 11337.2573645374 14110.182946172743 12523.792301030151 13978.253243109957 0.96028548887232 1.016790128865586 0.8984786072729589 0.9399269436119435 0.8018442555923446 0.8915830737069145 0.831252217614146 0.8110639553712239 1.0094382109672977 0.8959483050718997 1.0 13.770896468807049 -8.79248694126863 24.975596136289838 1.0044569692772143 0.894451635149491 0.13512916914318118 0.06923994417858799 148.54248376261452 119491.39113432264 0.011187503930740703 0.011910586896063882 1.6125495141024009e-09 8.79248694126863 -0.11000533412772329 GTGS(ph)ADSIATLPK ddPTM_A549_MK2206_60min_R1 1 GTGSADSIATLPK 13 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 GT(0.161)GS(0.787)ADS(0.045)IAT(0.007)LPK 88.163 0.00019184 2666900.0 2815.2 3980.4 3009.1 3972.9 4522.9 3351.1 2857.1 2781.2 6562.5 5000.2 4787.2 True False 3290.336934968162 4182.985358336992 3435.8356274975918 4946.260678350258 3857.587401449402 3705.711177719851 3376.1980870985744 3175.443617067785 5076.10422815908 3870.651347210279 3598.4061200013984 0.9143873218420614 1.1624550478297226 0.9548215273422935 1.3745698827202795 1.0720266898189643 1.0298201631889208 0.9382482061522456 0.882458374950338 1.4106535112710143 1.0756571710168097 1.0 11.813142304561019 -8.749176307810746 24.998943017750605 1.1939197337811198 1.0506101424480387 0.08984070434720992 0.1611174026654662 389.3133026345026 793635.9291922939 0.03233553956365891 0.03653326553001458 1.7816553331572387e-09 8.749176307810746 -0.14330959133308108 GTGS(ph)ADSIATLPK ddPTM_A549_PD325901_60min_R1 1 GTGSADSIATLPK 13 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 GT(0.016)GS(0.912)ADS(0.072)IATLPK 141.58 2.6432e-12 4839000.0 4532.9 3495.2 4095.0 4335.0 4993.7 4075.5 4230.6 4255.1 4191.2 4427.5 5297.0 True False 4993.076671055386 3789.752770405465 4372.911325235421 4602.763104500682 4642.959739329765 4042.3104792277163 4391.5977980731495 4170.228692438627 4015.0584392906057 4147.946894398121 4645.502580449569 1.074819480688391 0.8157896168983962 0.9413214715752525 0.9907998165518722 0.999452623031466 0.870155684820763 0.9453439583813883 0.89769161037363 0.8642893572350676 0.8928951868102726 1.0 12.18161896977366 -7.24148238156993 24.812710441697256 0.9279128648366568 0.9563588756429753 0.09830977478668346 0.06881187128348416 2598.9547114660977 3231304.325419655 0.01098869145165695 0.01901332413204683 5.734791309378546e-08 7.24148238156993 0.028446010806318478 GTHLPES(ph)PKLEDFYR ddPTM_A549_MK2206_60min_R1 2 GTHLPESPKLEDFYR 15 1 E9PSF3;E9PI60;Q9ULD4-3;Q9ULD4-2;Q9ULD4 E9PSF3 BRPF3 Bromodomain and PHD finger-containing protein 3 1 GTHLPES(1)PKLEDFYR;GT(0.002)HLPES(0.998)PKLEDFYR 84.035 8.1856e-05 7822200.0 928.19 1214.94 1292.0900000000001 880.22 1596.92 1233.76 1162.35 1279.69 1949.2799999999997 1624.0 1627.63 True False 1084.8457799332557 1276.7752565716887 1475.3277910117204 1095.8739395145774 1362.0151834271323 1364.315664296394 1373.5339492978985 1461.0899763862622 1507.771192360523 1257.1372720830161 1223.4445506972515 0.8867143012856551 1.0435906194882665 1.2058803892427479 0.8957283261346249 1.1132626996874588 1.1151430308131733 1.1226777286433698 1.194242906679812 1.2323984699602701 1.0275392304183812 1.0 10.256733001325095 -6.955991976936732 24.999894511585676 1.1204939187314193 1.0221375786963345 0.20460305740853224 0.09986113902661777 207.72273216507963 118001.31565214427 0.016327035591397813 0.030855191511211903 1.1066442276973371e-07 6.955991976936732 -0.09835634003508487 GTHLPES(ph)PKLEDFYR ddPTM_A549_PD325901_60min_R1 2 GTHLPESPKLEDFYR 15 1 E9PSF3;E9PI60;Q9ULD4-3;Q9ULD4-2;Q9ULD4 E9PSF3 BRPF3 Bromodomain and PHD finger-containing protein 3 1 GTHLPES(1)PKLEDFYR;GTHLPES(1)PKLEDFYR 82.87700000000001 0.000109 15634200.0 1701.92 1771.36 1681.1799999999998 1511.78 1728.71 1913.43 1544.1599999999999 1544.15 1754.11 2313.69 2288.13 True False 1874.6976655127164 1920.6387237884612 1795.2749845566036 1605.1592170985084 1607.2913733257424 1897.8476604756947 1602.9238537967744 1513.3507168877584 1680.3908567818407 2167.603218543195 2006.7045156511358 0.9342170961848931 0.9571108794586293 0.8946384335882518 0.7998981437372538 0.8009606600223392 0.9457534209314722 0.7987841963253157 0.7541472623819288 0.8373882869529434 1.080180565517814 1.0 10.970612482235163 -10.673344492612646 1.013469633533063 0.9973845421202263 0.856791306934756 0.4746609769702279 0.07028334696826895 0.4445349951426718 0.8347751286620867 0.042802943853363556 0.012219439148732828 2.1215609222809002e-11 10.673344492612646 -0.1405932351854703 GTKT(ph)PINR ddPTM_A549_MK2206_60min_R1 2 GTKTPINR 8 1 O94776;O94776-2 O94776 MTA2 Metastasis-associated protein MTA2 1 GT(0.055)KT(0.945)PINR;GT(0.228)KT(0.772)PINR 63.623999999999995 0.0038823 31899000.0 7512.6 7672.7 6379.9 5978.2 10216.6 7613.7 7388.0 7532.6 10284.0 10959.3 11203.0 True False 8780.543214564443 8063.207657248578 7284.665753837325 7442.859268371601 8713.751673848185 8419.37668043497 8730.303968179018 8600.369117620012 7954.690420173403 8483.586518435584 8420.98591292941 1.0426977678567277 0.9575134955241398 0.8650609120070606 0.8838465406935294 1.0347662095562076 0.9998089021272476 1.0367318100811318 1.0213019243287393 0.9446269715235998 1.0074338808013037 1.0 13.039773435819136 -6.762889728212428 24.99994931178397 0.9872875875372893 0.9335664739134519 0.25395091919408674 0.05049600356501898 51.94790440727584 895461.4600204116 0.007819907310199955 0.01536458092451177 1.7262761554274905e-07 6.762889728212428 -0.05372111362383736 GTKT(ph)PINR ddPTM_A549_PD325901_60min_R1 2 GTKTPINR 8 1 O94776;O94776-2 O94776 MTA2 Metastasis-associated protein MTA2 1 GT(0.014)KT(0.986)PINR;GTKT(1)PINR 89.805 0.0010498 73232000.0 8159.0 8670.9 8875.3 9443.0 10198.1 8989.5 9696.6 10640.3 10765.3 10331.7 11430.5 True False 8987.29567366165 9401.627173526194 9477.63122951452 10026.27266339099 9481.82063753507 8916.29249245922 10065.609419183122 10428.070869346122 10312.871878339176 9679.354698781051 10024.620963909532 0.8965222431868055 0.9378536313117245 0.945435369939245 1.0001647642826001 0.9458532818020109 0.8894393637983424 1.004088778560422 1.0402459012554273 1.0287542955955542 0.9655581725861254 1.0 13.291260068217083 -7.905663248819939 7.905701438499425 1.0162404177584563 0.9399129998155784 0.5403817851794489 0.032618360192757476 0.12631427549725857 9.356967661835807 0.004705394442002465 0.006511254195196518 1.2426154559789474e-08 7.905663248819939 -0.0763274179428779 GTLDEEDEEADS(ph)DTDDIDHR ddPTM_A549_MK2206_60min_R1 11 GTLDEEDEEADSDTDDIDHR 20 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 GTLDEEDEEADS(0.871)DT(0.129)DDIDHR;GTLDEEDEEADS(0.882)DT(0.118)DDIDHR;GTLDEEDEEADS(0.867)DT(0.133)DDIDHR;GTLDEEDEEADS(1)DTDDIDHR;GTLDEEDEEADS(0.867)DT(0.133)DDIDHR;GTLDEEDEEADS(0.983)DT(0.017)DDIDHR;GTLDEEDEEADS(0.886)DT(0.114)DDIDHR;GTLDEEDEEADS(0.968)DT(0.032)DDIDHR;GTLDEEDEEADS(0.999)DT(0.001)DDIDHR;GTLDEEDEEADS(1)DTDDIDHR;GTLDEEDEEADS(0.997)DT(0.003)DDIDHR 346.73 3.425399999999999e-230 1026782300.0 9250.85 11293.1 9045.98 9391.710000000001 12581.77 10179.23 10208.390000000001 12031.45 15389.909999999998 13799.670000000002 15101.42 True False 10812.167318432166 11867.870553269902 10328.835987381837 11692.679371609885 10731.008299969937 11256.389362173983 12063.12232345953 13736.944882270302 11904.119957636218 10682.314962712953 11351.320636010933 0.9525030315971909 1.0455057110817807 0.9099237276951402 1.0300721604599932 0.9453532891958741 0.9916369841993724 1.0627065088083654 1.2101627046540482 1.048699119631207 0.9410636264492762 1.0 13.470572532941206 -7.65346353899715 5.7648348629011785 1.0432082225497192 0.9788191056420015 0.20941070205891044 0.07022943840014377 0.294583619356587 14.053165602058828 0.010382773905592124 0.01544306760922843 2.2209381335114004e-08 7.65346353899715 -0.06438911690771776 GTLDEEDEEADS(ph)DTDDIDHR ddPTM_A549_PD325901_60min_R1 11 GTLDEEDEEADSDTDDIDHR 20 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 GTLDEEDEEADS(0.996)DT(0.004)DDIDHR;GTLDEEDEEADS(0.967)DT(0.033)DDIDHR;GTLDEEDEEADS(1)DTDDIDHR;GTLDEEDEEADS(1)DTDDIDHR;GTLDEEDEEADS(0.861)DT(0.139)DDIDHR;GTLDEEDEEADS(0.866)DT(0.134)DDIDHR;GTLDEEDEEADS(0.87)DT(0.13)DDIDHR;GTLDEEDEEADS(0.5)DT(0.5)DDIDHR;GTLDEEDEEADS(0.998)DT(0.002)DDIDHR;GTLDEEDEEADS(0.949)DT(0.051)DDIDHR;GTLDEEDEEADS(0.898)DT(0.102)DDIDHR 468.7 0.0 1803255400.0 17173.12 18730.170000000002 19122.35 16204.720000000001 21043.54 16440.6 16999.1 17195.48 18911.71 19995.460000000003 20817.359999999997 True False 18916.52250021724 20308.627159437332 20420.10766303189 17205.64875081068 19565.51434667191 16306.713204463551 17646.010052764443 16852.502661806906 18116.916595943054 18732.94324315346 18256.95669211773 1.0361268210919443 1.1123774625704947 1.118483655704134 0.9424160357590736 1.0716744677999448 0.8931780624480433 0.966536227825032 0.9230729384970726 0.9923294939821413 1.0260715166860879 1.0 14.15615867766963 -7.18977982726115 24.99993233337161 0.9812472468915272 1.0564730047991908 0.37332693409734496 0.05597504065039415 148.58933895344597 51838.12669292358 0.008134790224365406 0.014089869507666455 6.459816370630727e-08 7.18977982726115 0.07522575790766362 GTLDPVEK ddPTM_A549_MK2206_60min_R1 1 GTLDPVEK 8 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 118.06 0.0034650999999999996 16980000.0 6317.7 6671.3 5328.3 5274.7 8992.3 6481.3 6155.8 5633.8 9028.5 8034.2 7942.9 False True 7383.973307064639 7010.840674573807 6083.933061046631 6567.001736790279 7669.544582027782 7167.146864061254 7274.229178034158 6432.408402788898 6983.559165551882 6219.268640005764 5970.458717112118 1.2367514217795699 1.1742549453494782 1.019005967432499 1.099915776650191 1.2845821310255208 1.2004348750489255 1.2183702329580242 1.0773725617351262 1.1696855294445105 1.041673501933867 1.0 12.543626064306133 -10.737141981576611 0.6162379844776636 0.976820589777605 1.1659923602989992 0.3661512219606573 0.07262011384130279 0.9161531914469954 0.4972967384026239 0.09634339964333544 0.015759286241363298 1.8317154915063634e-11 10.737141981576611 0.18917177052139422 GTLDPVEK ddPTM_A549_PD325901_60min_R1 1 GTLDPVEK 8 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 134.48 0.0029928 25984000.0 11614.0 11035.0 11348.0 10965.0 12835.0 11395.0 11885.0 12333.0 12425.0 13068.0 13499.0 False True 12793.044730225083 11964.958177335862 12118.143521067543 11642.283146678197 11933.513878346228 11302.202898000214 12337.290178721545 12087.008639948672 11902.820459101396 12242.884249801165 11838.708577211393 1.080611508154759 1.0106641361514288 1.023603498813548 0.9834082045983208 1.0080080779517901 0.9546820773809813 1.0421145261122386 1.0209735767307624 1.0054154455675524 1.0341401826013168 1.0 13.5312240930443 -4.682726832594102 1.410979937997523 1.0031035167119289 1.2993191554105288 0.4315415549714333 0.023334965063323547 3.10795031290727 1.7277633041850926 0.0028387695034474162 1.955553423121843 2.0762190303263398e-05 4.682726832594102 0.2962156386985999 GTLGRHS(ph)PYR ddPTM_A549_MK2206_60min_R1 2 GTLGRHSPYR 10 1 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 GTLGRHS(1)PYR;GT(0.166)LGRHS(0.802)PY(0.032)R 55.261 0.007394700000000001 8333400.0 1503.58 2041.1399999999999 1431.316 1654.23 1366.44 1354.1000000000001 1193.9899999999998 1562.73 2700.86 2700.84 2754.04 True False 1757.3475449983778 2145.0253075861633 1634.2981313373907 2059.5164242612054 1165.4384861121223 1497.3899632211665 1410.9225277431042 1784.251763159909 2089.1195223871596 2090.7183681851566 2070.13586036277 0.8489044504984425 1.0361761025724514 0.7894641905536561 0.9948701743180741 0.562976811535399 0.7233293195349818 0.6815603529982107 0.8619008043497383 1.0091702493483026 1.0099425879317794 1.0 11.015509737719876 -8.670227644019223 4.211545819579351 1.004518257511803 0.8063681743847507 0.32816341698104445 0.12530973327644007 0.18916900890434277 6.218833189446879 0.02196746127261066 0.024757064699787026 2.136841728156753e-09 8.670227644019223 -0.1981500831270523 GTLS(ph)DSEIETNSATSTIFGK ddPTM_A549_MK2206_60min_R1 2 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GT(0.211)LS(0.646)DS(0.137)EIET(0.003)NS(0.003)ATSTIFGK;GT(0.331)LS(0.553)DS(0.115)EIETNSATSTIFGK 102.58 1.6205e-09 7268900.0 1363.54 1130.88 1300.07 1032.75 1822.35 1164.12 1451.52 1350.27 2111.1499999999996 1893.31 2139.0 True False 1593.672216647658 1188.4369616209779 1484.4394750060792 1285.7737963619086 1554.2847290524471 1287.3064057196848 1715.242395220791 1541.6749075284463 1632.9778958137958 1465.6099560390976 1607.8272666032333 0.9911961625172088 0.739157113644255 0.9232580550410564 0.7996964742850088 0.9666988247662309 0.800649691953107 1.0668076296805735 0.9588560534773468 1.01564261891372 0.9115468971585547 1.0 10.65089670672579 -7.7633145825429795 24.99999945804452 1.0072139609062138 0.8677627004514635 0.35626643526731894 0.07916936745593742 29.714025872654844 396146.74472791835 0.009866882710758607 0.014014952000162409 1.724588228661325e-08 7.7633145825429795 -0.13945126045475031 GTLS(ph)DSEIETNSATSTIFGK ddPTM_A549_PD325901_60min_R1 2 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GT(0.134)LS(0.707)DS(0.159)EIETNSATSTIFGK;GT(0.103)LS(0.853)DS(0.044)EIETNSATSTIFGK 105.92 3.4791000000000004e-10 6952400.0 2181.1 1808.12 1642.5900000000001 1136.77 1759.35 1897.96 1558.88 1666.02 1818.15 1901.8600000000001 1660.48 True False 2402.523666359043 1960.496617997691 1754.0660350960807 1206.9857011080135 1635.779325428004 1882.5036430266327 1618.2040314518676 1632.7899241325943 1741.7394782869378 1781.7762350265414 1456.2514866499712 1.6497999750619452 1.346262397649261 1.2045076356496747 0.8288305366023142 1.123280793478211 1.2927050446192037 1.1112119343990918 1.1212279878173654 1.1960430559241635 1.223536079695563 1.0 10.508043807240298 -5.4660359203136775 1.9515564880577392 1.0992968921749664 1.6968332589017354 0.6444460613576649 0.11784996205439625 0.23524557623029826 1.2711280080535219 0.01707697226685094 0.21611440263384754 3.4195115870774402e-06 5.4660359203136775 0.597536366726769 GTLVQTK ddPTM_A549_MK2206_60min_R1 2 GTLVQTK 7 0 P10412;Q02539;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1.3;Histone H1.2;Histone H1.5 0 ; 111.04 0.02278 72492000.0 18941.199999999997 22242.0 19907.6 18432.3 26020.0 20565.1 19866.5 19346.8 30334.0 26707.0 28443.0 False True 22138.011492120986 23374.02279673685 22730.797028337736 22948.214327457397 22192.492468485572 22741.285231991442 23475.98589385873 22089.268147090093 23463.397433444177 20673.870151182957 21379.818113134977 1.0354630415924915 1.0932751005199948 1.0631894484814521 1.073358725786299 1.0380112848037428 1.0636800140979696 1.0980442288906072 1.0331831650859207 1.0974554277909934 0.9669806376173841 1.0 14.383961959062747 -10.958492338935374 1.1824283392451709 0.9994341069018416 1.069094334099428 0.5943810740200466 0.025297556595950343 0.28313512750117414 0.6942416033035536 0.016252614250502707 0.0036479271801669742 1.1002912545408721e-11 10.958492338935374 0.06966022719758624 GTLVQTK ddPTM_A549_PD325901_60min_R1 2 GTLVQTK 7 0 P10412;Q02539;P16402;P16403;P16401 P10412;P16402;P16403;P16401 HIST1H1E;HIST1H1A;HIST1H1D;HIST1H1C;HIST1H1B Histone H1.4;Histone H1.1;Histone H1.3;Histone H1.2;Histone H1.5 0 ; 126.57 0.01624 100676000.0 23836.0 26164.0 24226.0 23656.0 28205.0 26774.0 27226.0 26607.0 29640.0 26109.0 30488.0 False True 26255.813172864233 28368.93210256599 25870.122042772487 25117.177393325983 26223.97810196768 26555.961420891406 28262.100328638848 26076.30251221228 28394.33387587649 24460.473284210184 26738.16927935556 0.9819600174771969 1.0609900702689294 0.9675352778451707 0.9393753600295612 0.9807693947923023 0.9931854774139367 1.0569945920141925 0.9752463693296196 1.0619400894361024 0.9148148113152992 1.0 14.706613069288442 -7.602547649104248 9.038316834803053 1.0269558974652655 0.9866876634522648 0.0 0.04888432633870841 0.3714021749605943 38.51563080026612 0.005887317865736988 0.008736388186030442 2.497194391651061e-08 7.602547649104248 -0.040268234013000725 GTNES(ph)LER ddPTM_A549_MK2206_60min_R1 2 GTNESLER 8 0 P08670;B0YJC4;B0YJC5;P14136-2;P14136;A0A1W2PR46;A0A1X7SBR3;P14136-3;A0A1W2PRT3 P08670 VIM;GFAP Vimentin;Glial fibrillary acidic protein 1 GT(0.051)NES(0.949)LER;GTNES(1)LER 88.596 0.0026815000000000003 28919000.0 2065.48 2639.2 2377.9900000000002 1278.58 2559.7 2263.2200000000003 1911.15 2278.51 2617.95 2852.5 2917.4 True False 2414.082527862335 2773.5240070653667 2715.224739567646 1591.8321573976382 2183.1715208140868 2502.7124381961507 2258.3812166737043 2601.4957701442245 2024.9885050070948 2208.1182688527115 2192.929063856135 1.1008484349317322 1.2647577401287617 1.2381726268851967 0.7258931370075857 0.9955504520402085 1.1412646580529513 1.0298469083639556 1.186310954158111 0.923417240613462 1.0069264461158023 1.0 11.098643429606483 GTNES(ph)LER ddPTM_A549_PD325901_60min_R1 4 GTNESLER 8 0 P08670;B0YJC4;B0YJC5;P14136-2;P14136;A0A1W2PR46;A0A1X7SBR3;P14136-3;A0A1W2PRT3 P08670 VIM;GFAP Vimentin;Glial fibrillary acidic protein 1 GTNES(1)LER;GT(0.012)NES(0.988)LER;GTNES(1)LER;GTNES(1)LER 84.68700000000001 0.0031176 64153000.0 4489.41 3815.86 3961.84 3924.4300000000003 4817.16 4365.5 4318.73 4626.15 4699.23 4872.85 4838.15 True False 4945.1715982710375 4137.435913961833 4230.714286879295 4166.833128072806 4478.819299899826 4329.948815376912 4483.081633449736 4533.877809105531 4501.737705112521 4565.177419394215 4243.088221559764 1.1654651848019288 0.9751001388420123 0.9970837432468185 0.982028397830737 1.0555564876408359 1.0204710789127118 1.0565610233297835 1.0685325339379517 1.0609578377933602 1.0759091447115965 1.0 12.050898959869478 GTNESLER ddPTM_A549_MK2206_60min_R1 2 GTNESLER 8 0 P08670;B0YJC4;B0YJC5;P14136-2;P14136;A0A1W2PR46;A0A1X7SBR3;P14136-3;A0A1W2PRT3 P08670 VIM;GFAP Vimentin;Glial fibrillary acidic protein 0 ; 98.044 0.0067713999999999995 20722000.0 4060.3999999999996 4215.3 4285.3 3519.7 4897.6 4111.0 3837.2 3986.6 5565.200000000001 5766.2 5859.7 False True 4745.696252751041 4429.840764997974 4893.019977573173 4382.0266580053385 4177.169527811487 4546.023291339058 4534.369570478684 4551.712758450462 4304.691085798235 4463.611415200174 4404.574770507227 1.0774470862721968 1.0057363073184558 1.1108949745470427 0.9948807515647436 0.9483706703724426 1.032114001510194 1.0294681795029466 1.033405719191887 0.9773227405792251 1.0134034833710288 1.0 12.10478702887183 -5.204688722890253 0.4194990788112955 0.9924939039161409 1.1255673825749026 0.19468981884494485 0.03846274662160201 5.190249214787093 0.5837127792129313 0.008814117976534329 0.3475173033265241 6.241820527068101e-06 5.204688722890253 0.13307347865876173 GTNESLER ddPTM_A549_PD325901_60min_R1 2 GTNESLER 8 0 P08670;B0YJC4;B0YJC5;P14136-2;P14136;A0A1W2PR46;A0A1X7SBR3;P14136-3;A0A1W2PRT3 P08670 VIM;GFAP Vimentin;Glial fibrillary acidic protein 0 ; 125.82 0.0030166 31991000.0 8549.5 8596.400000000001 8658.0 8645.400000000001 9890.6 7686.700000000001 8614.7 8466.3 8594.4 9769.0 9895.0 False True 9417.438946190745 9320.848797068422 9245.583944783464 9179.406722872016 9195.918376717655 7624.102063717266 8942.53712264472 8297.433004816136 8233.207255831077 9152.183672812032 8677.977729573058 1.0852112369564777 1.0740807464053024 1.065407659814118 1.0577817792260717 1.059684486787693 0.8785574590420572 1.0304862954614518 0.9561482252414533 0.94874722111509 1.0546447522702163 1.0 13.08314316841115 -7.0399425298547715 24.353394179847218 0.971958033117369 1.0690249525805797 0.5130733886856225 0.04368108867672132 180.04759801137686 109776.72935622156 0.005180183269729788 0.008973414456470496 9.121315336443582e-08 7.0399425298547715 0.09706691946321078 GTNS(ph)SDSEELSAGESITK ddPTM_A549_MK2206_60min_R1 1 GTNSSDSEELSAGESITK 18 0 Q4LE39-2;Q4LE39;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 GT(0.009)NS(0.58)S(0.407)DS(0.005)EELSAGESITK 99.569 4.0042000000000003e-07 8080500.0 868.28 858.26 740.18 885.68 1391.7 718.12 967.25 1021.8 1385.0 1643.7 1339.8 True False 1014.8244365921274 901.941768075145 845.148654003246 1102.6716397596863 1186.9827735738427 794.110981750524 1142.9868047132038 1166.6432791312595 1071.2997113905253 1272.3870284007724 1007.0906834011271 1.007679301693947 0.8955914129094361 0.8391981655008727 1.0949079938221304 1.1786255132111714 0.7885198372292234 1.1349393093908198 1.1584292242594227 1.0637569476589266 1.2634284572107166 1.0 9.975977881217013 -6.26739728751869 24.979911151425927 1.044185796259602 0.9122998042841025 0.22610115535267727 0.1251989904836388 512.5964257908056 2149183.0766538805 0.014466749436715288 0.03447451858554265 5.402598734007667e-07 6.26739728751869 -0.13188599197549944 GTNSS(ph)DSEELSAGESITK ddPTM_A549_MK2206_60min_R1 1 GTNSSDSEELSAGESITK 18 0 Q4LE39-2;Q4LE39;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 GTNS(0.185)S(0.814)DS(0.001)EELSAGESITK 146.78 1.2607e-31 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GTNTS(ph)SPYDAGADYLR ddPTM_A549_PD325901_60min_R1 1 GTNTSSPYDAGADYLR 16 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 GTNT(0.051)S(0.474)S(0.474)PYDAGADYLR 176.19 2.6079e-28 9312900.0 3699.8 4112.7 3175.0 4336.7 4274.9 3793.7 3898.3 3981.8 3883.6 3636.2 4357.9 True False 4075.4009723511926 4459.291662521907 3390.4745928260004 4604.5681096396975 3974.645771604382 3762.805364997226 4046.6519397316115 3902.379875338328 3720.3857975827937 3406.609711442226 3821.905927004187 1.0663268668011692 1.1667716965543777 0.8871161817118912 1.2047832148629054 1.0399643129677765 0.9845363640194862 1.0588046950971377 1.021055973085455 0.9734373029163043 0.8913379283808034 1.0 11.900076552691003 -7.677498221562742 0.8113686373736647 0.988260333634192 1.0759832843780133 0.2085570402002337 0.08365996178611962 0.7311835951670266 0.9691157722727772 0.014115081843904621 0.027029821342066336 2.101366374130984e-08 7.677498221562742 0.0877229507438213 GTNTSS(ph)PYDAGADYLR ddPTM_A549_MK2206_60min_R1 2 GTNTSSPYDAGADYLR 16 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 GTNTS(0.024)S(0.976)PYDAGADYLR;GTNT(0.003)S(0.037)S(0.96)PYDAGADYLR 213.51 2.7112e-46 12749400.0 3586.0 4151.200000000001 3799.6 3516.8 4848.5 4136.4 3628.8 4049.3999999999996 5510.8 5655.9 5901.8 True False 4191.2291307174755 4362.478348791211 4338.44041415701 4378.416157875149 4135.292072769114 4574.111102479901 4288.105988051976 4623.4148507673945 4262.612598939283 4378.228261806852 4436.220178606341 0.9447748222528869 0.9833773287063727 0.9779587665822195 0.9869699838141598 0.9321656514506536 1.0310829756689126 0.9666125249444009 1.042196884875958 0.9608658784556547 0.9869276288225831 1.0 12.11511525582008 -7.248244056795922 24.977521916262415 0.9880015090653063 0.9680025459639641 0.21107225680849395 0.02804409658873737 1467.7561228466748 2778328.724753637 0.004146998870047718 0.007153789193022912 5.6461959114691725e-08 7.248244056795922 -0.019998963101342193 GTNTSS(ph)PYDAGADYLR ddPTM_A549_PD325901_60min_R1 1 GTNTSSPYDAGADYLR 16 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 GTNTS(0.074)S(0.926)PYDAGADYLR 190.11 1.9546e-34 8056800.0 4631.4 4779.0 4122.3 4261.7 5142.0 4746.9 5078.1 4512.0 4934.1 5022.3 5409.8 True False 5101.576318543524 5181.743101901961 4402.06406740366 4524.935529977058 4780.843658936992 4708.24282022968 5271.3498743429445 4422.004620404475 4726.736935794947 4705.191120888922 4744.428895547685 1.0752772211068433 1.0921742565822128 0.9278385585111603 0.9537366097368207 1.0076752680229817 0.9923729333678152 1.111060991827644 0.9320414991473931 0.9962710032878056 0.9917297159420843 1.0 12.212018719822293 GTPAGTT(ph)PGASQAPK ddPTM_A549_MK2206_60min_R1 2 GTPAGTTPGASQAPK 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GTPAGT(0.014)T(0.986)PGASQAPK;GTPAGT(0.116)T(0.884)PGASQAPK 172.1 2.9999000000000003e-27 17580900.0 2914.7 2334.84 2255.31 3021.7 3890.0 2437.0 2641.0 2673.1000000000004 4138.6 3739.7 3737.8 True False 3406.630102426721 2453.673383092036 2575.146870842311 3762.0166356492664 3317.7861530518408 2694.8817224503246 3120.8355143422827 3052.0201110254175 3201.2137079861573 2894.8991726655495 2809.601101968003 1.2124960016710291 0.8733173479229293 0.9165524846351081 1.338986033645181 1.1808744489485985 0.9591688017785434 1.1107753026421698 1.0862823583346441 1.1393837031683418 1.030359495032159 1.0 11.4561496004949 -11.022594522862951 1.3233354648679925 1.000197010185015 1.0918094099271225 0.04750483218954615 0.12898064405602508 1.1203494937523886 3.507585329660912 0.09096211580195596 0.02072269506732623 9.493043635309302e-12 11.022594522862951 0.09161239974210744 GTPAGTT(ph)PGASQAPK ddPTM_A549_PD325901_60min_R1 2 GTPAGTTPGASQAPK 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GTPAGT(0.232)T(0.767)PGAS(0.001)QAPK;GTPAGT(0.088)T(0.912)PGASQAPK 208.47 2.8066e-45 22158000.0 9305.5 9233.2 9337.5 9348.9 11043.0 10274.900000000001 9164.9 10738.8 10564.5 9204.2 12151.4 True False 10250.18750965297 10011.314167918223 9971.198900948899 9926.360320107586 10267.377776281835 10191.224621032241 9513.675284725718 10524.606209574367 10120.510804038371 8623.045241201402 10656.854834071153 0.9618398363541537 0.9394248419253056 0.9356605730491763 0.9314530857990019 0.9634529076492516 0.9563069760929612 0.8927282423243148 0.9875902762535553 0.9496714520012011 0.8091547999352083 1.0 13.379494096745724 -10.664367009439632 0.44687336601715416 1.0132949517036707 0.9425579818477807 0.0 0.06142653380344406 1.2360986603318178 0.3293812500556814 0.03941191680950175 0.005858472388976468 2.1658730159130857e-11 10.664367009439632 -0.07073696985588995 GTPGGGGPRPPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 GTPGGGGPRPPSPR 14 1 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 GTPGGGGPRPPS(1)PR;GTPGGGGPRPPS(1)PR 104.2 6.6575e-06 55316000.0 5136.4 5757.9 5156.4 4872.1 7571.1 5532.4 5517.5 5273.0 8362.9 7846.900000000001 7894.5 True False 6003.298747076752 6050.952516020646 5887.655056205705 6065.764718716878 6457.401219375527 6117.834895890094 6519.958330323184 6020.463897885237 6468.716502807091 6074.279840091269 5934.077772884161 1.0116649927489823 1.019695519271848 0.9921769281672401 1.0221916447462926 1.0881895159653447 1.030966416356323 1.0987315265930977 1.0145576327623844 1.0900963469616067 1.0236265975224934 1.0 12.534808119774675 -6.534000578542376 24.8779758090353 1.0476612284857525 1.0087230279263504 0.2629309961215158 0.031156645057543494 261.0837024504371 584005.5000103595 0.005311189113745746 0.011064357777473575 2.9241484824566636e-07 6.534000578542376 -0.038938200559402114 GTPGGGGPRPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 GTPGGGGPRPPSPR 14 1 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 GTPGGGGPRPPS(1)PR;GTPGGGGPRPPS(1)PR 120.63 6.164999999999999e-07 68413000.0 9204.7 8478.1 8905.7 9041.6 10369.6 8894.7 9738.5 10150.1 9980.0 9888.0 10667.3 True False 10139.154367858007 9192.579240894544 9510.094356324566 9600.079097036525 9641.275069177946 8822.264512228388 10109.103946611674 9947.648292900592 9560.575306384873 9263.669992503363 9355.28972558612 1.0837883876677883 0.9826076487779343 1.0165472834384877 1.0261658781962595 1.030569373261597 0.9430241896303925 1.0805762561221295 1.0633180355381628 1.0219432627764922 0.9902066386215508 1.0 13.191566617892327 GTPGKGAT(ph)PAPPGK ddPTM_A549_MK2206_60min_R1 1 GTPGKGATPAPPGK 14 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GT(0.029)PGKGAT(0.971)PAPPGK 42.338 0.032862999999999996 1579700.0 1185.9 1170.9 1305.7 929.14 1415.9 1010.3 1271.5 977.64 1441.1 1856.3 1452.3 True False 1386.0509275286813 1230.4938086817376 1490.8678936637564 1156.7793417106798 1207.6229856313887 1117.2092754171358 1502.5150914374146 1116.2234638969321 1114.6931509638166 1436.9605407436586 1091.6538285590805 1.2696799033427912 1.127183156867519 1.3656965740060796 1.0596576601921153 1.1062325382263174 1.0234098449430504 1.3763658882785645 1.0225068008695413 1.0211049710100377 1.3163152119755426 1.0 10.092299724255394 -7.421948714548274 0.28299369700536897 0.9765142083434718 1.2850545101772253 0.0 0.15032632417821024 2.090748295511411 0.33797786146016 0.07646395331239995 0.21953979740130794 3.784872773064204e-08 7.421948714548274 0.30854030183375347 GTPGS(ph)PSGTQEPR ddPTM_A549_MK2206_60min_R1 1 GTPGSPSGTQEPR 13 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GTPGS(0.979)PS(0.021)GTQEPR 131.35 3.8972e-08 12862000.0 1293.7 1354.1 1756.8 1056.5 1162.6 1096.5 873.62 1100.6 1524.4 2152.0 2107.8 True False 1512.0449320717228 1423.0179061712697 2005.9406568036204 1315.3425474280875 991.5830800869078 1212.530902202207 1032.345445679555 1256.6134204461382 1179.1258339665828 1665.8617053710889 1584.3750876794259 0.9543478333065422 0.8981572086288672 1.2660768730854293 0.8301964336958996 0.625851219069117 0.765305458051701 0.6515789434631873 0.7931287421886015 0.7442213924820061 1.0514313929355033 1.0 10.62969820661691 -6.458319810458803 24.995197313003864 0.8253633300671581 1.0291816828135474 0.32133861706595457 0.14824050201756478 220.1501528365195 85234.6956253064 0.022027620704324822 0.05118752870622491 3.480808970671597e-07 6.458319810458803 0.20381835274638926 GTPKPPGPPAQPPGPPNAS(ph)SNPDLR ddPTM_A549_MK2206_60min_R1 2 GTPKPPGPPAQPPGPPNASSNPDLR 25 1 Q8N4C8-4;Q8N4C8 Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.5)S(0.5)NPDLR;GTPKPPGPPAQPPGPPNAS(0.5)S(0.5)NPDLR 66.479 5.9087e-05 12069200.0 1714.0600000000002 2027.17 1978.78 1574.38 2723.89 2410.49 2340.09 2003.83 3121.65 3335.6000000000004 3350.4 True False 2003.3514232564414 2130.34429425686 2259.4007586918647 1960.1031706766037 2323.2093893152637 2665.566451846238 2765.2540623844106 2287.8790389720025 2414.6012592507095 2582.0856433251884 2518.4032136640803 0.7954847787625403 0.845910727360205 0.8971560814539355 0.7783118922504892 0.9224930212565823 1.058435137544177 1.0980187951559917 0.9084641516333347 0.9587826310536084 1.025286828302786 1.0 11.29829357160419 -6.979214304774205 6.2244099276061355 0.9888873243258883 0.8362301389248555 0.6841619202185432 0.05594291577053033 0.08362158492689946 11.533602347442441 0.008160759933205107 0.015308728507218773 1.0490246544754473e-07 6.979214304774205 -0.1526571854010328 GTPKPPGPPAQPPGPPNAS(ph)SNPDLR ddPTM_A549_PD325901_60min_R1 2 GTPKPPGPPAQPPGPPNASSNPDLR 25 1 Q8N4C8-4;Q8N4C8 Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.5)S(0.5)NPDLR;GTPKPPGPPAQPPGPPNAS(0.5)S(0.5)NPDLR 73.548 2.0409000000000002e-06 14882100.0 1276.71 1368.6399999999999 1927.83 1573.73 1646.6 1568.8899999999999 1982.62 1537.21 1691.6399999999999 1547.12 1704.09 True False 1406.320659335773 1483.9800960424975 2058.6641367835414 1670.935727899851 1530.9484964616202 1556.1134800038208 2058.0696890312915 1506.5491406320843 1620.546253636563 1449.4345791668486 1494.4977331165385 0.9409988574576916 0.992962426880295 1.3774956570128234 1.118058389031731 1.0243899756669883 1.041228397689699 1.3770978994658714 1.0080638513184055 1.0843417274760065 0.9698472918686081 1.0 10.545444993371632 -9.813036254570434 0.7525958288888732 1.0084573520902305 1.1163665672688754 0.10060049105438484 0.13807517944156905 1.1586305072228402 1.3690969710501815 0.05808785784390769 0.029445315597011187 1.538026241692141e-10 9.813036254570434 0.10790921517864493 GTPKPPGPPAQPPGPPNAS(ph)SNPDLRR ddPTM_A549_MK2206_60min_R1 1 GTPKPPGPPAQPPGPPNASSNPDLRR 26 2 Q8N4C8-4;Q8N4C8 Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.828)S(0.172)NPDLRR 65.69 6.7946e-05 14218000.0 838.6 980.0 867.81 630.44 1141.6 1406.5 885.59 908.41 1518.2 1519.2 1641.8 True False 980.1351781984591 1029.8778140815632 990.8785071611728 784.897828301527 973.6721522683756 1555.3348964408615 1046.4902397373646 1037.179899388949 1174.3301240672176 1176.0116648697776 1234.095748625145 0.7942132361207688 0.8345201863217724 0.8029186619150658 0.6360104790701607 0.78897618223959 1.260303261050527 0.8479813992578907 0.8404371383212593 0.9515713228697937 0.9529338920257391 1.0 10.269238616513935 -7.036720759301061 24.992781629324288 0.9742429533122547 0.7665882019090579 0.44720049933746386 0.11324001912437247 389.9572196130569 265411.0254005049 0.016070642289008594 0.027840852050043604 9.189232516851497e-08 7.036720759301061 -0.2076547514031969 GTPKPPGPPAQPPGPPNAS(ph)SNPDLRR ddPTM_A549_PD325901_60min_R1 2 GTPKPPGPPAQPPGPPNASSNPDLRR 26 2 Q8N4C8-4;Q8N4C8 Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.825)S(0.175)NPDLRR;GTPKPPGPPAQPPGPPNAS(0.812)S(0.188)NPDLRR 64.152 8.1273e-05 52770000.0 2222.31 2592.0 2416.0 2362.43 3154.5 2923.9 2534.9 2869.1000000000004 2764.7 3116.6 3442.7 True False 2447.917275221844 2810.43693662479 2579.9642885882245 2508.3519356321895 2932.938802434216 2900.0887278159566 2631.3670066505038 2811.873549734594 2648.5092735032295 2919.817344117715 3019.2697250733872 0.8107646875313018 0.9308333446613415 0.8544994397695009 0.8307810046918617 0.9714066875436004 0.9605265484339814 0.8715243241762857 0.9313091594247174 0.8772019444002652 0.9670607829006549 1.0 11.559983929769286 -14.999999999943878 0.24965260142482879 1.671398895268286 0.8824874753170465 0.3391138072521509 0.049221993571976284 33.108525777906806 0.42566376509232834 11.010807282163674 0.024881533835204663 1.0000000001292261e-15 14.999999999943878 -0.7889114199512394 GTPPLTPSDS(ph)PQTR ddPTM_A549_MK2206_60min_R1 2 GTPPLTPSDSPQTR 14 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GTPPLT(0.002)PS(0.368)DS(0.629)PQT(0.001)R;GTPPLT(0.001)PS(0.028)DS(0.971)PQT(0.001)R 141.34 6.4484e-13 16896900.0 3792.0 3980.8 3717.0 3265.8 5193.5 4383.1 4193.8 4341.1 6275.9 6096.9 6587.8 True False 4431.996894501019 4183.405716628454 4244.126492110118 4065.921146607335 4429.54302978785 4846.916732733691 4955.759174573514 4956.4642190611785 4854.418670552923 4719.606055519052 4951.867445969509 0.8950152529039058 0.8448137520388329 0.8570759493097003 0.8210884461208112 0.8945197096083829 0.9788058314603633 1.0007859113044661 1.0009282908199433 0.980320802913272 0.9530962019915329 1.0 12.27375698095862 -7.182647330390492 2.9462087926927505 0.9920439736448035 0.8540844734166941 0.8956518666447751 0.02118405207923993 0.04625295474006989 0.7850479165639769 0.0025920199812821173 0.004672349761397959 6.566783066369086e-08 7.182647330390492 -0.13795950022810932 GTPPLTPSDS(ph)PQTR ddPTM_A549_PD325901_60min_R1 2 GTPPLTPSDSPQTR 14 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GTPPLTPSDS(1)PQTR;GTPPLTPS(0.003)DS(0.991)PQT(0.006)R 223.58 6.493799999999999e-47 30424000.0 10478.7 10347.6 10171.6 9440.5 11449.2 9880.6 9323.1 10370.2 9955.9 10339.0 13402.3 True False 11542.489909988766 11219.628566905365 10861.905942799673 10023.6182440689 10645.047689595754 9800.135669502484 9677.895672296074 10163.358225735486 9537.488145574865 9686.19377553522 11753.902064179578 0.9820134494028926 0.9545450102989688 0.924110638619468 0.8527906893674249 0.9056607441061556 0.8337772099844813 0.8233772596923191 0.8646795056008397 0.8114316499744106 0.8240832467929292 1.0 13.520852162220402 -5.818497172618992 2.5328176228692234 0.8905696422480943 0.974758376039435 0.2849012190311021 0.05484370161057267 0.43779137618769476 5.488022840226759 0.01055337257477264 0.048279426502719304 1.5188078298720082e-06 5.818497172618992 0.08418873379134073 GTPPPVFTPPLPKGT(ph)PPLTPSDSPQTR ddPTM_A549_MK2206_60min_R1 1 GTPPPVFTPPLPKGTPPLTPSDSPQTR 27 1 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GT(0.003)PPPVFT(0.14)PPLPKGT(0.798)PPLT(0.021)PS(0.023)DS(0.007)PQT(0.008)R 42.708999999999996 0.024319999999999998 2031300.0 811.97 854.4 1126.0 944.84 1244.5 730.47 750.06 663.1 1254.1 998.17 1220.3 True False 949.0106852394496 897.8853105625378 1285.6837315351067 1176.3258424154797 1061.435698579181 807.7678505532575 886.3361930661006 757.0964556585811 970.0483523861789 772.6827037408276 917.2658314333443 1.0346081285470974 0.9788714239573038 1.4016479056306532 1.282426317545614 1.1571734847253092 0.8806256843678759 0.9662806164719859 0.8253839069482418 1.0575433196616026 0.842375980072661 1.0 9.841196089475606 -7.123637227449047 7.203776321431435 0.9969259782229115 1.1817429645099693 0.40647958317187516 0.13240202341579443 0.24489040482804736 13.421440463553871 0.019186016958638807 0.03336909598899389 7.522509979420515e-08 7.123637227449047 0.18481698628705778 GTPPPVFTPPLPKGT(ph)PPLTPSDSPQTR ddPTM_A549_PD325901_60min_R1 1 GTPPPVFTPPLPKGTPPLTPSDSPQTR 27 1 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 GTPPPVFT(0.01)PPLPKGT(0.905)PPLT(0.058)PS(0.016)DS(0.005)PQT(0.005)R 45.22 0.007341800000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GTPQT(ph)PKDDPAITLLNNR ddPTM_A549_MK2206_60min_R1 2 GTPQTPKDDPAITLLNNR 18 1 Q9NRU3;Q9NRU3-2 Q9NRU3 CNNM1 Metal transporter CNNM1 1 GT(0.022)PQT(0.955)PKDDPAIT(0.023)LLNNR;GT(0.112)PQT(0.888)PKDDPAITLLNNR 52.50899999999999 0.005742499999999999 8497500.0 4293.1 4536.9 3814.5 3902.9 5730.5 4381.7 3865.3999999999996 4507.4 6274.7 6515.5 6805.1 True False 5017.6703237822585 4767.808831333311 4355.453458206631 4859.110675207839 4887.551041147446 4845.368585662941 4567.693145451968 5146.337753333571 4853.490468636915 5043.644024788724 5115.205858794607 0.9809322366088835 0.932085425875087 0.8514717840178947 0.9499345303676369 0.9554944954452318 0.9472480129675069 0.8929636991243869 1.006086146950555 0.9488358049739635 0.9860099796603795 1.0 12.320576586311262 -10.367029871521696 0.2652740692790306 1.0251359310061987 0.9238838693518767 0.25247583047613753 0.037974299541580415 3.7284412284831285 0.4150038287975932 0.12241795366097642 0.027350597150703523 4.2950688352643904e-11 10.367029871521696 -0.10125206165432199 GTPQT(ph)PKDDPAITLLNNR ddPTM_A549_PD325901_60min_R1 2 GTPQTPKDDPAITLLNNR 18 1 Q9NRU3;Q9NRU3-2 Q9NRU3 CNNM1 Metal transporter CNNM1 1 GT(0.002)PQT(0.965)PKDDPAIT(0.033)LLNNR;GT(0.003)PQT(0.987)PKDDPAIT(0.01)LLNNR 84.32700000000001 4.4452e-05 16698600.0 4419.1 4633.2 4737.6 4731.6 5706.9 5200.0 5031.3 5664.299999999999 5922.200000000001 5550.2 6086.0 True False 4867.723778830525 5023.656024216813 5059.122025503137 5023.860185756729 5306.067031736193 5157.652924054502 5222.768874733004 5551.321092942609 5673.3105290052545 5199.759424796942 5337.460582332653 0.9119924547907692 0.941207142746018 0.9478518758994052 0.9412453934341057 0.9941182609010032 0.9663121337376569 0.9785119335626972 1.0400678388741358 1.062923171326883 0.974200997756965 1.0 12.38193779499087 -7.426204691324757 0.8621022682876598 1.030401353219762 0.9342713779714943 0.5651694282665498 0.028068354663220375 0.26496105569605116 0.3917783447119238 0.005326425758471306 0.011745289644252426 3.747963119146925e-08 7.426204691324757 -0.09612997524826772 GTPSQS(ph)PVVGR ddPTM_A549_MK2206_60min_R1 5 GTPSQSPVVGR 11 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 GTPSQS(1)PVVGR;GTPS(0.002)QS(0.998)PVVGR;GT(0.001)PS(0.016)QS(0.983)PVVGR;GT(0.024)PS(0.055)QS(0.921)PVVGR;GTPS(0.024)QS(0.976)PVVGR 145.81 2.0724e-11 1200957800.0 7120.67 8704.81 7276.499999999999 7210.3 9826.339999999998 7967.169999999999 8333.42 7595.55 11395.8 11399.99 12758.34 True False 8322.465012332961 9147.847647750335 8308.417115910483 8976.823823682667 8380.898402873881 8810.250641220578 9847.49454446431 8672.2424728963 8814.669495353179 8824.724341363093 9590.09206572917 0.8678190944666571 0.953885279208192 0.866354260101544 0.9360518921149822 0.8739121945266384 0.9186825924961235 1.0268404596088274 0.9042918893226409 0.9191433653544354 0.9201918272399939 1.0 13.227328949971536 -7.539046874981726 24.989048721492214 0.9606041895671996 0.9021477097006403 0.2702657555621404 0.0421530181598725 231.8297065075017 358308.8830586592 0.0066712520262700616 0.009896455542046637 2.8903678976177144e-08 7.539046874981726 -0.05845647986655933 GTPSQS(ph)PVVGR ddPTM_A549_PD325901_60min_R1 6 GTPSQSPVVGR 11 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 GTPS(0.001)QS(0.999)PVVGR;GTPSQS(1)PVVGR;GTPS(0.03)QS(0.969)PVVGR;GT(0.001)PS(0.009)QS(0.991)PVVGR;GT(0.001)PS(0.004)QS(0.995)PVVGR;GT(0.001)PS(0.009)QS(0.989)PVVGR 190.24 5.2117e-19 1459677100.0 20355.949999999997 20315.77 19304.010000000002 21332.029999999995 23452.78 22203.969999999998 21473.870000000003 21939.5 23204.149999999998 21867.36 26201.600000000002 True False 22422.47105874163 22027.851236101018 20614.096203042223 22649.661044544788 21805.537640498686 22023.1482300228 22291.06987380256 21501.89946129522 22228.96027010525 20486.651157692984 22978.969305627234 0.9757822798975877 0.9586091936119476 0.8970853274082278 0.9856691457000292 0.9489345388158384 0.9584045279450213 0.9700639561907498 0.9357207964949803 0.9673610671763978 0.8915391671930248 1.0 14.488026468612324 -10.019113206711712 0.529147150735734 1.0024630099666159 0.9521389476830893 0.0 0.039247631865361086 0.7457818750017596 0.40074411675885535 0.017080387325672203 0.005611430401920384 9.56944593864385e-11 10.019113206711712 -0.050324062283526594 GTQEAEEEGS(ph)EATPEAGPEGQETAEITDFQR ddPTM_A549_PD325901_60min_R1 1 GTQEAEEEGSEATPEAGPEGQETAEITDFQR 31 0 A0A2R8Y4Z8 A0A2R8Y4Z8 1 GT(0.1)QEAEEEGS(0.449)EAT(0.449)PEAGPEGQET(0.003)AEITDFQR 50.645 0.0025224 1666500.0 303.88 186.55 0.0 215.48 204.64 0.0 0.0 0.0 257.55 258.2 150.85 True False 334.72967389536757 202.27122319728193 0.0 228.78971020941324 190.2667923696744 0.0 0.0 0.0 246.72606915425064 241.89720793531245 132.2964063169374 2.5301494062769065 1.5289245477515734 0.0 1.729372071236089 1.4381856443920296 0.0 0.0 0.0 1.8649491397610491 1.8284488193565034 1.0 7.047630062735615 GTQEVAPPTPLTPTSHT(ph)ANTSPRPVSGMER ddPTM_A549_MK2206_60min_R1 2 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 H7BYT1;P48730-2;P48730 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPT(0.003)PLT(0.011)PT(0.071)S(0.071)HT(0.255)ANT(0.255)S(0.255)PRPVS(0.079)GMER;GTQEVAPPTPLT(0.007)PT(0.044)S(0.044)HT(0.283)ANT(0.283)S(0.283)PRPVS(0.055)GMER 65.315 0.00041421 39775000.0 6629.0 7681.4 6117.700000000001 7079.400000000001 9056.2 6330.700000000001 6765.3 6175.9 11886.3 9883.8 12626.9 True False 7747.813136510353 8072.350450087879 6985.281851165472 8813.853317806337 7724.044976675597 7000.610472021445 7994.467438538371 7051.352737900522 9194.072028520719 7651.042715402776 9491.292245288618 0.81630750969198 0.8505006738249907 0.7359674184126925 0.9286252166749418 0.8138033027599308 0.7375824377862222 0.8422949406606614 0.7429286292813018 0.9686849578448671 0.8061118041329595 1.0 13.212388809100238 -8.83630037367806 6.982759710177397 0.985961699148843 0.8105944818522984 0.22198404146953366 0.07673902326539812 0.08520911565565849 6.57006141356598 0.008982173590535327 0.009547480861529477 1.4578056407225455e-09 8.83630037367806 -0.1753672172965446 GTQEVAPPTPLTPTSHTANT(ph)SPRPVSGMER ddPTM_A549_MK2206_60min_R1 2 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 H7BYT1;P48730-2;P48730 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLT(0.003)PT(0.054)S(0.091)HT(0.091)ANT(0.329)S(0.329)PRPVS(0.102)GMER;GTQEVAPPTPLTPT(0.001)S(0.003)HT(0.122)ANT(0.402)S(0.402)PRPVS(0.07)GMER 119.23 6.1208e-21 40587000.0 6991.7 7806.4 7765.6 7049.3 9259.400000000001 6924.799999999999 6662.1 6608.4 13494.2 11501.8 12782.3 True False 8171.728029346724 8203.712416169707 8866.87885045206 8776.378816455108 7897.354525853012 7657.577739689778 7872.517334380808 7545.160937376215 10437.785245809408 8903.535391652978 9608.102136466812 0.8505038678066877 0.8538327652693395 0.9228543498511016 0.9134352124698006 0.8219473954048855 0.7969917087606752 0.8193623696506384 0.7852914998414866 1.0863524447969384 0.9266695196609427 1.0 13.230035771986959 -8.764411167004969 24.999998174879387 1.0407775506089336 0.8473693725544049 0.5952088277243799 0.05616298116129787 27.85377025021746 234317.61168825644 0.009171657045440911 0.009971380269104001 1.7202391724877373e-09 8.764411167004969 -0.1934081780545287 GTQEVAPPTPLTPTSHTANT(ph)SPRPVSGMER ddPTM_A549_PD325901_60min_R1 3 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 H7BYT1;P48730-2;P48730 H7BYT1 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPT(0.001)PLT(0.001)PT(0.008)S(0.008)HT(0.048)ANT(0.406)S(0.319)PRPVS(0.209)GMER;GTQEVAPPTPLTPTS(0.001)HT(0.024)ANT(0.483)S(0.483)PRPVS(0.009)GMER;GTQEVAPPT(0.003)PLT(0.003)PT(0.032)S(0.104)HT(0.076)ANT(0.376)S(0.302)PRPVS(0.104)GMER 130.77 1.1896e-27 82046000.0 8980.2 9325.9 8200.9 9355.5 9099.2 10356.400000000001 7963.1 9248.7 9356.4 10354.6 11704.900000000001 True False 9891.863293126169 10111.826322248895 8757.462390017874 9933.367987117905 8460.103582535881 10272.06091205348 8266.140128075522 9064.227423035212 8963.183045757452 9700.80878887291 10265.271503474452 0.9636241272116478 0.9850520094696354 0.8531155154594562 0.967667341653437 0.8241480587895234 1.0006613959091806 0.8052529468195467 0.882999287448683 0.8731559650150231 0.9450123930564827 1.0 13.325484164963445 -10.865852285340576 1.131949873177539 0.9996089110334757 0.9032895100567166 0.11590962926702386 0.06483178000158703 0.5415813462421297 1.2399005466853126 0.0404433669620648 0.00996916767765115 1.3619078233769858e-11 10.865852285340576 -0.09631940097675906 GTQS(ph)IPNDS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 2 GT(0.135)QS(0.866)IPNDS(0.999)PAR 45.115 0.040999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GTQS(ph)IPNDS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 2 GT(0.112)QS(0.889)IPNDS(0.999)PAR 57.136 0.017136000000000002 1101000.0 728.57 526.11 643.39 614.64 976.86 707.49 530.79 470.7 896.7 761.77 780.08 True False 802.5338900551134 570.4471360832058 687.0543144183681 652.6049168512794 908.2487235840509 701.7284360075623 550.9895039094325 461.31151924299314 859.0148173582477 713.6717121955185 684.1351053345475 1.173063454568185 0.8338223424512804 1.0042670067082629 0.9539123365583623 1.3275867829350902 1.025716164155049 0.8053811295650357 0.6742988565356666 1.2556216026046239 1.0431736460103556 1.0 9.418137451360407 GTQS(ph)IPNDSPAR ddPTM_A549_MK2206_60min_R1 1 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 1 GT(0.177)QS(0.823)IPNDSPAR 78.763 0.00096027 2483700.0 506.45 577.6 453.16 569.79 546.43 621.04 619.67 479.06 752.3 1052.7 604.3 True False 591.9263784862983 606.9973728709293 517.4249021158518 709.3885755788447 466.05087085144396 686.7580405870123 732.2560178615988 546.9682220597197 581.9052511762399 814.8943388680974 454.23563216845895 1.303126255552702 1.3363050581769789 1.1391112133712096 1.5617193485951781 1.0260112546137798 1.5118982130673524 1.6120620356573712 1.2041508488635468 1.2810647381366882 1.793990345887008 1.0 8.827297071373055 -10.195581614214726 0.6760691590008284 1.0007765289433832 1.3391183346227842 0.0 0.2879328390421787 0.6054931494789868 0.5219428425936357 0.10479048130420965 0.03479143044146845 6.374092854841491e-11 10.195581614214726 0.338341805679401 GTQS(ph)IPNDSPAR ddPTM_A549_PD325901_60min_R1 1 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 1 GT(0.178)QS(0.814)IPNDS(0.007)PAR 57.803999999999995 0.013462 2416200.0 794.47 752.66 909.49 826.72 904.6 901.93 777.94 915.22 877.3 854.68 891.15 True False 875.1240095420983 816.0892996605 971.2134606076588 877.7846167826535 841.0640167005838 894.5849811139385 807.5449324051021 896.9652191237997 840.4301318929305 800.7153589393981 781.5441994652882 1.1197370668745734 1.0442010832130117 1.24268526498199 1.1231413621689093 1.0761566873326134 1.1446377335101325 1.0332684101009295 1.1476832912808763 1.075345620206676 1.024529846792064 1.0 9.61018365550923 -9.926105512027231 0.3580189312806166 0.9792542036199727 1.1290700374547118 0.352602039825074 0.0540082152599808 1.2398137834646517 0.3074691206851064 0.07201438237310544 0.02260860598732962 1.1854807001426556e-10 9.926105512027231 0.14981583383473907 GTQS(ph)TEGS(ph)PVSK ddPTM_A549_MK2206_60min_R1 2 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 2 GT(0.006)QS(0.974)T(0.132)EGS(0.878)PVS(0.009)K;GT(0.002)QS(0.943)T(0.056)EGS(0.599)PVS(0.4)K 128.44 1.0002e-07 46053000.0 12369.0 15090.0 13707.0 12747.900000000001 18417.0 15013.6 14089.7 13896.1 19114.1 20803.0 19873.2 True False 14456.584806983956 15858.016545398765 15650.858710614302 15871.136072274972 15707.883696852381 16602.329186778894 16649.616109969113 15865.914730021434 14784.786868945585 16103.587851689024 14938.135967582684 0.9677636378699629 1.0615793416134596 1.0477116251035805 1.0624575989077216 1.051529034876917 1.1114056815929165 1.1145711985819728 1.062108067864165 0.9897343886164992 1.0780185617961633 1.0 13.866712514416674 -8.75821573852175 24.72070853113267 0.9951523475082966 1.0628877754185437 0.03205431008183268 0.04406118742496443 51.140871716539806 392177.4821894049 0.006238304613808397 0.006930310006296531 1.7449551201299186e-09 8.75821573852175 0.06773542791024711 GTQS(ph)TEGS(ph)PVSK ddPTM_A549_PD325901_60min_R1 1 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 2 GT(0.009)QS(0.973)T(0.053)EGS(0.928)PVS(0.036)K 129.29 9.2973e-08 32665000.0 6593.8 7167.4 7883.3 7457.6 8880.9 7124.7 7672.1 6979.6 9077.3 7731.0 8198.7 True False 7263.197721901001 7771.421951992485 8418.308144133918 7918.239014561536 8257.136221441759 7066.67880538676 7964.0659638342095 6840.386402609721 8695.812648161054 7242.86334061929 7190.311875841398 1.0101366738075008 1.0808184799471006 1.170784840699114 1.101237213529762 1.148369690219525 0.9828056039029363 1.107610643509433 0.9513337558545428 1.2093790642625615 1.0073086488716099 1.0 12.81183863279142 GTQSIPNDS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 1 GTQSIPNDS(1)PAR;GTQSIPNDS(1)PAR 191.06 1.0664000000000001e-19 83329000.0 5034.9 5735.9 4350.1 5090.4 6437.1 6533.200000000001 5749.6 6595.4 6992.799999999999 6066.299999999999 5889.1 True False 5884.668028513497 6027.83280999024 4967.00959196347 6337.548228516735 5490.211117174807 7224.538887612823 6794.227895972126 7530.3181475653855 5408.94196520698 4695.9186167716725 4426.673939108508 1.329365593549593 1.361706982015529 1.1220635764656703 1.431672699569343 1.2402564979250505 1.6320467662607603 1.5348381176094532 1.7011232928264697 1.221897532913005 1.060823245932902 1.0 12.112007395672881 -9.275400216672105 1.9030451203572845 1.0707556885100233 1.410785931711529 0.43892765449908044 0.16388995597826703 0.21064749600694596 1.5722195853866385 0.036792143306309484 0.03303534717612638 5.303954420770226e-10 9.275400216672105 0.34003024320150566 GTQSIPNDS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 1 GTQSIPNDS(1)PAR;GTQS(0.006)IPNDS(0.994)PAR 148.48 4.9365e-12 112579000.0 10225.599999999999 9570.6 10513.1 9001.0 9709.3 8196.3 8372.1 8986.7 8968.9 9290.3 10620.3 True False 11263.695384311146 10377.148050023618 11226.582186405985 9556.971327245823 9027.352263266615 8129.552050274608 8690.704846888912 8807.453218570237 8591.968323189903 8703.70887250748 9314.070427628576 1.209320400981653 1.1141367386745977 1.2053357630949701 1.026078920221252 0.9692166634781437 0.8728248420969311 0.9330727005358948 0.9456073246391238 0.9224719084905476 0.9344688705261918 1.0 13.18519607568938 -6.453760597509942 2.9437839501364564 0.9525016264415154 1.170498592316045 0.8711077746777718 0.03946978108101195 0.07916094032435375 1.3376705574063354 0.006410668589383469 0.015985647653385806 3.517542897486719e-07 6.453760597509942 0.21799696587452955 GTQST(ph)EGS(ph)PVSK ddPTM_A549_PD325901_60min_R1 1 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 2 GTQS(0.48)T(0.52)EGS(0.919)PVS(0.081)K 137.73 3.0981e-08 34296000.0 6620.9 6738.2 7933.2 6869.1 7908.8 8949.1 6861.5 8065.3 7506.3 7334.3 8515.2 True False 7293.048893951029 7306.051761714953 8471.594658207001 7293.388706142014 7353.313171878822 8876.22149666465 7122.618137256865 7904.431264394545 7190.8363148613935 6871.211046320533 7467.884382300202 0.9765883509440031 0.9783295224858044 1.134403563917743 0.9766338540843289 0.9846581435174696 1.188585821936716 0.9537665251136374 1.0584565667793429 0.9629013984073661 0.9201014229151889 1.0 12.866483876611133 -8.766011180598275 24.98682431744527 0.9824812155852783 1.032354816124043 0.14054541533362408 0.07240633115611309 198.34149105781802 1084017.6284737966 0.011427178711569317 0.012362228057054421 1.7139131834814198e-09 8.766011180598275 0.04987360053876466 GTQSTEGS(ph)PVSK ddPTM_A549_MK2206_60min_R1 2 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 1 GTQSTEGS(0.999)PVS(0.001)K;GTQSTEGS(0.998)PVS(0.002)K 158.93 6.834299999999999e-14 59642000.0 6654.7 6552.4 5933.8 5592.6 9251.400000000001 6653.599999999999 6523.200000000001 6638.0 8884.0 9904.3 9642.900000000001 True False 7777.85066820568 6885.889172436771 6775.3020658819005 6962.787251061355 7890.531315255476 7357.67953569777 7708.381002331528 7578.95682802242 6871.788184832802 7666.911751164906 7248.30179949898 1.073058336056496 0.9500003397916932 0.9347433720751288 0.9606094563477807 1.0886041356336582 1.0150901189305268 1.0634740682106187 1.045618275517487 0.9480549202997861 1.0577528313866376 1.0 12.82342731117977 -8.765719252719778 24.99909406434826 0.9754703809561094 1.013537192683632 0.0 0.05549248176787867 200.20679824590235 1169422.4586500942 0.009221889395624664 0.009985765119375278 1.7150656439875197e-09 8.765719252719778 0.03806681172752269 GTQSTEGS(ph)PVSK ddPTM_A549_PD325901_60min_R1 2 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 1 GTQST(0.001)EGS(0.999)PVSK;GTQSTEGS(1)PVSK 204.17 6.1231e-25 105873000.0 13497.7 13467.4 13076.7 13715.400000000001 14444.3 13749.1 13943.8 14591.5 12836.6 14700.0 14641.0 True False 14867.976567518448 14602.345061844406 13964.163498585121 14562.569108066584 13429.782198129833 13637.131888099582 14474.438939340132 14300.461085689687 12297.122342478964 13771.839491282302 12840.249816945843 1.1579195716189667 1.1372321621478927 1.0875305151895098 1.1341344067034989 1.0459128435652365 1.0620612591276892 1.1272708199366634 1.1137214064804828 0.9577011754280599 1.0725523013662086 1.0 13.648385651025464 -8.757299216431695 24.999617882779777 0.9800255518357827 1.106383042754587 0.4737248331697398 0.04296194659867132 38.40638713883376 231909.46026408972 0.006015027286349523 0.00670132075493483 1.748641509699708e-09 8.757299216431695 0.12635749091880444 GTRPEDSSVLIPTDNS(ph)TPHKEDLSSK ddPTM_A549_PD325901_60min_R1 1 GTRPEDSSVLIPTDNSTPHKEDLSSK 26 2 Q7KZ85-2;U3KQE3;U3KQP6;U3KQ49;L0R819;U3KQP1 Q7KZ85-2 SUPT6H;ASNSD1 Transcription elongation factor SPT6 1 GTRPEDS(0.001)S(0.002)VLIPT(0.123)DNS(0.405)T(0.405)PHKEDLS(0.029)S(0.033)K 50.505 0.0022353 7207700.0 3568.7 3052.4 3682.4 3600.3 3927.3 4111.5 3574.9 3530.6 3546.6 3753.2 4273.4 True False 3930.9917968619156 3309.63646039873 3932.3098080700674 3822.682354125446 3651.4599964494846 4078.017307163478 3710.9447757603407 3460.17941329788 3397.548735633726 3516.2223114748817 3747.798891314553 1.048880132274949 0.8830880621873133 1.0492318083510603 1.019980651305606 0.9742945398995843 1.0881099614534278 0.9901664639371068 0.9232564269434986 0.9065451039828939 0.9382099769610516 1.0 11.871827824028578 -8.013217430334501 24.371865796462277 0.9524048547286236 1.0081511170687614 0.2530204605060269 0.05400875859492587 620.7599066234377 1144631.7657336376 0.009143605111845176 0.01208508678798098 9.700242012478367e-09 8.013217430334501 0.0557462623401378 GTS(ph)AEQDNR ddPTM_A549_MK2206_60min_R1 1 GTSAEQDNR 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R1E7 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 GT(0.015)S(0.985)AEQDNR 85.958 0.0012317 12917000.0 960.13 634.49 419.21 234.03 0.0 0.0 0.0 0.0 114.35 1238.0 1048.8 True False 1122.176471075228 666.7828308740931 478.6602816135276 291.3673605060061 0.0 0.0 0.0 0.0 88.44990757942712 958.334940171658 788.3540145925524 1.4234423245186443 0.8457911275034333 0.6071641328051272 0.3695894929343316 0.0 0.0 0.0 0.0 0.11219567090698583 1.215614967936654 1.0 9.622699814895137 -10.876922282317038 1.1705528548072086 0.9937142494327752 0.3331502243961517 0.2829301256638609 0.4357531011532623 0.5920639052743824 1.4620395883562052 0.3082499662529036 0.07733552060517247 1.327632018318199e-11 10.876922282317038 -0.6605640250366235 GTS(ph)AEQDNR ddPTM_A549_PD325901_60min_R1 2 GTSAEQDNR 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R1E7 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 GT(0.035)S(0.965)AEQDNR;GT(0.133)S(0.867)AEQDNR 107.03 0.00050265 89219000.0 1065.3600000000001 953.53 791.87 882.94 1005.83 644.9 441.78 711.96 851.36 976.61 1006.93 True False 1173.5145629234196 1033.8873195138256 845.611060101141 937.4771984977692 935.1839707251255 639.6481482159138 458.5921796512918 697.7593992781847 815.5802998841508 914.9466779306945 883.0839934551793 1.3288821580061636 1.1707689496993472 0.957565833338887 1.0615945996595064 1.058997759733022 0.7243344381242927 0.5193075438464139 0.7901393349324696 0.9235591471804265 1.0360811482391934 1.0 9.786406854350927 -5.318623657003191 0.8975787505840582 0.9072244892968087 1.545122279983566 0.4626814122630515 0.1543827730129478 1.6324292350196299 1.025718513007221 0.026325951782205648 0.9967369365903878 4.8014934748012715e-06 5.318623657003191 0.6378977906867573 GTS(ph)DEEDSVLGIAR ddPTM_A549_PD325901_60min_R1 1 GTSDEEDSVLGIAR 14 0 A6QL64 A6QL64 ANKRD36 Ankyrin repeat domain-containing protein 36A 1 GT(0.146)S(0.816)DEEDS(0.038)VLGIAR 54.343 0.018137 1504400.0 467.38 459.53 488.96 791.25 489.35 612.65 605.35 486.45 499.57 651.68 585.32 True False 514.8280735330289 498.25620582067495 522.143765955339 840.123715440868 454.979744165853 607.6607815234602 628.3869255102308 476.7473731373574 478.574810201472 610.5328135835952 513.3293506491866 1.002919612685203 0.9706365030375737 1.0171710721294334 1.636617338124925 0.8863310535243285 1.1837639534053068 1.2241398718299188 0.9287358545433541 0.932295824495985 1.1893588644629014 1.0 9.003740941703398 -8.273588427879453 24.466384312081416 0.9641883072210398 1.1330483907717943 0.05765088825879072 0.19916138006178102 791.9847100862684 1594936.8199662887 0.02965001984843822 0.03598412400970515 5.3261276654912195e-09 8.273588427879453 0.16886008355075455 GTS(ph)PRPPEGGLGYSQLGDDDLK ddPTM_A549_MK2206_60min_R1 2 GTSPRPPEGGLGYSQLGDDDLK 22 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;P21127-10;P21127-5;P21127-12;P21127-4;Q9UQ88-8;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 GT(0.02)S(0.98)PRPPEGGLGYSQLGDDDLK;GT(0.006)S(0.994)PRPPEGGLGYSQLGDDDLK 215.2 7.3846e-74 70410000.0 12846.0 14004.0 13443.0 12188.0 19614.7 16243.5 15626.1 17665.5 19091.9 16338.1 17758.5 True False 15014.09074545362 14716.743784079808 15349.419540876064 15174.060547140109 16729.403613435978 17962.376388437344 18465.1601024854 20169.6387233248 14767.61513349947 12647.311862696755 13348.574340333573 1.124771107584694 1.1024955481284786 1.1498920521045315 1.1367551440524035 1.2532726856745302 1.3456400609136867 1.3833057847002983 1.5109957220211108 1.1063065430798984 0.9474653652324572 1.0 13.704398046408945 -8.978614861435167 17.941164642348845 1.0468943175774788 1.2503142558517548 0.41634716798782834 0.1233672562723921 5.603825232024019 4702.006850844596 0.0237845903712323 0.024461209991320912 1.0504735907284327e-09 8.978614861435167 0.20341993827427607 GTS(ph)PRPPEGGLGYSQLGDDDLK ddPTM_A549_PD325901_60min_R1 2 GTSPRPPEGGLGYSQLGDDDLK 22 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;P21127-10;P21127-5;P21127-12;P21127-4;Q9UQ88-8;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 GT(0.124)S(0.876)PRPPEGGLGYSQLGDDDLK;GT(0.119)S(0.881)PRPPEGGLGYSQLGDDDLK 173.96 7.8351e-41 136222000.0 11006.5 11832.0 12224.1 11364.8 13296.099999999999 11592.3 11953.599999999999 11072.4 12026.099999999999 12422.900000000001 13762.7 True False 12123.871777442946 12829.124164407613 13053.700935484821 12066.777884666519 12362.227805054861 11497.89615221481 12408.500789260905 10851.552295870239 11520.684838889281 11638.51597389462 12069.975148943417 1.0044653470976075 1.0628956568755363 1.0815018899709599 0.999735105976819 1.0242131945182198 0.9526031338367182 1.0280469210698517 0.8990534083096404 0.9544911813590421 0.9642535158751702 1.0 13.55913508525854 -6.846063137160581 1.5036995990799074 0.9737869702582642 1.048327043627228 0.44808942617808667 0.03728137417300901 0.2907986892466578 1.3204682811757757 0.005770669842728113 0.014086941663906545 1.4254003557095876e-07 6.846063137160581 0.07454007336896384 GTS(ph)PSSSSR ddPTM_A549_MK2206_60min_R1 1 GTSPSSSSR 9 0 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GT(0.102)S(0.791)PS(0.096)S(0.01)S(0.001)SR 69.27600000000001 0.0040828 24669000.0 1012.0 824.69 509.22 410.72 526.48 469.42 280.45 442.04 748.14 1198.2 1185.8 True False 1182.8008589754838 866.6631984642086 581.4350530837542 511.3464184379216 449.0354894238387 519.0937128242227 331.40413479639994 504.70052369072454 578.6874845340852 927.5257878139589 891.3331335849056 1.327002009022493 0.972322430086857 0.6523206993834573 0.5736872098328794 0.5037796447864967 0.582379015505066 0.37180726521800667 0.5662310809212708 0.6492381610527904 1.0406050811591485 1.0 9.799820926063186 -5.428216178041338 2.6921992957972125 0.7176389823782033 1.351066035297917 0.4983111378563967 0.196383003512458 0.27059051062462536 3.1378943397065653 0.032298336243382526 0.31635520219909324 3.730644119190234e-06 5.428216178041338 0.6334270529197136 GTS(ph)PSSSSR ddPTM_A549_PD325901_60min_R1 1 GTSPSSSSR 9 0 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GT(0.032)S(0.627)PS(0.093)S(0.121)S(0.121)S(0.006)R 52.725 0.023349 30951000.0 1332.3 1152.4 963.38 878.49 1180.6 935.76 774.59 727.05 841.07 1181.6 1160.6 True False 1467.5541152125788 1249.516792348152 1028.7607600745553 932.7523321044529 1097.6787288488933 928.1394808102395 804.0674463219124 712.5484173903087 805.7227527997119 1106.993574346883 1017.8535576495694 1.441812630297682 1.2275997690999283 1.0107158857411402 0.9163914839167703 1.0784250058364548 0.9118595438753508 0.7899637823919066 0.7000500337550793 0.7915900541334152 1.0875764652266442 1.0 9.991314295142267 -4.944935671056002 0.7288020674780286 0.8806937723881472 2.073990766150723 0.6936138972013492 0.11233250898746053 1.6490286668831609 0.4499191122964928 0.018573449027077183 1.791188454015619 1.135178949180875e-05 4.944935671056002 1.193296993762576 GTS(ph)PSSSSRPQR ddPTM_A549_PD325901_60min_R1 3 GTSPSSSSRPQR 12 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GT(0.016)S(0.55)PS(0.083)S(0.117)S(0.117)S(0.117)RPQR;GT(0.001)S(0.881)PS(0.022)S(0.013)S(0.061)S(0.022)RPQR;GT(0.098)S(0.711)PS(0.152)S(0.035)S(0.004)S(0.001)RPQR 130.99 5.6943e-08 494691000.0 5126.76 4730.88 4992.780000000001 5142.639999999999 5386.53 5269.26 5897.52 5489.37 5863.139999999999 5118.41 5986.81 True False 5647.224901078765 5129.567860624804 5331.620074825133 5460.289193017157 5008.198715319694 5226.348893577588 6121.953350846774 5379.8802090225445 5616.732615418572 4795.232719086682 5250.470323515441 1.0755655309175574 0.9769730223311334 1.0154557108810318 1.0399619189469549 0.9538571607365005 0.9954058534851973 1.1659818975508147 1.0246472939628877 1.0697579967765443 0.9132958427762418 1.0 12.358230946109762 GTSDSSSGNVS(ph)EGESPPDSQEDSFQGR ddPTM_A549_PD325901_60min_R1 1 GTSDSSSGNVSEGESPPDSQEDSFQGR 27 0 S5FZ81;Q8WUB8-3;Q8WUB8-2;Q8WUB8 S5FZ81 PHF10 PHD finger protein 10 1 GTSDS(0.001)S(0.001)S(0.005)GNVS(0.979)EGES(0.014)PPDSQEDSFQGR 93.6 3.4683999999999997e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GTSELDRPLQGT(ph)LTLLR ddPTM_A549_PD325901_60min_R1 1 GTSELDRPLQGTLTLLR 17 1 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 GTSELDRPLQGT(0.5)LT(0.5)LLR 49.089 0.0084805 1164400.0 441.72 492.63 501.42 216.93 427.91 295.76 264.54 367.77 408.8 489.69 491.14 True False 486.5630892229226 534.1456589851356 535.4493764834057 230.3292734162244 397.85507780935995 293.3514286189155 274.60721446184243 360.4345388400161 391.61955764029415 458.77088982898175 430.7328935929771 1.1296167449953392 1.240085600450749 1.243112342818612 0.5347380635245262 0.9236700603258658 0.6810518374204297 0.63753481228516 0.8367936236154052 0.9091935244916696 1.0650936964719004 1.0 8.750649691231011 -6.199139425192915 24.999990525209427 0.8801048642328256 1.2078535049947534 0.5099093042647822 0.15936223609127764 164.88424686196953 66164.98001884295 0.023183825939425556 0.06133863260898341 6.322088554922599e-07 6.199139425192915 0.3277486407619278 GTSFFPTAGGFRS(ph)PSPGLFR ddPTM_A549_MK2206_60min_R1 1 GTSFFPTAGGFRSPSPGLFR 20 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 GTSFFPT(0.007)AGGFRS(0.955)PS(0.037)PGLFR 58.015 0.0013465999999999999 1544100.0 829.58 1184.5 1233.4 1076.7 1519.7 1121.6 1293.1 1492.3 1807.0 1540.3 1753.1 True False 969.5928227162857 1244.7859905914395 1408.3146664968026 1340.4915483348989 1296.1541431344172 1240.286967542175 1528.0395318424848 1703.8380949770792 1397.7173851860498 1192.3451602151902 1317.7568869014153 0.7357903664584098 0.9446249175130018 1.0687211582770215 1.0172525460951618 0.9836064269656029 0.9412107649527041 1.1595762063786514 1.292983639025783 1.0606792490173618 0.9048293900545499 1.0 10.363868516606258 -7.7259988642304 24.995829019702224 1.062338447933685 0.9585373856879842 0.22925156697933924 0.11972572858167412 267.4672950087655 188641.4471572628 0.01831331902626451 0.02716243613218689 1.879321731610593e-08 7.7259988642304 -0.10380106224570085 GTSFFPTAGGFRS(ph)PSPGLFR ddPTM_A549_PD325901_60min_R1 1 GTSFFPTAGGFRSPSPGLFR 20 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 GTSFFPTAGGFRS(0.967)PS(0.033)PGLFR 83.245 3.2355e-05 2979800.0 2215.7 1939.0 1974.6 2378.5 2337.5 2742.1 2309.3 2289.5 2736.4 2273.0 2568.8 True False 2440.6362328878695 2102.406334921092 2108.6082302344007 2525.414543034573 2173.3220639372253 2719.769246740358 2397.181675197449 2243.8341264219944 2621.3986240873314 2129.482392087394 2252.8538849648567 1.08335309678814 0.9332191266163222 0.9359720327655843 1.1209846141770388 0.9646973016943475 1.2072550576367207 1.0640644256584104 0.9959962966959115 1.1635901651598786 0.9452376855415161 1.0 11.137538031314682 -6.260634751159879 24.992118143174686 1.075636234566636 0.979085190295768 0.09888298571091902 0.087104232417495 88.09983134277348 2736366.9007346015 0.011639218332557091 0.028949996575845148 5.487382688687692e-07 6.260634751159879 -0.09655104427086791 GTSGS(ph)LADVFANTR ddPTM_A549_MK2206_60min_R1 2 GTSGSLADVFANTR 14 0 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 GTS(0.002)GS(0.998)LADVFANTR;GTS(0.001)GS(0.999)LADVFANTR 175.66 7.6352e-23 9521500.0 4947.9 5247.4 4714.2 3803.6 6264.700000000001 4964.2 5075.7 4943.6 8042.5 6561.700000000001 6392.2 True False 5782.984555459285 5514.470246542443 5382.744446894136 4735.482170750095 5343.170928797911 5489.508349030733 5997.888989075013 5644.370439140045 6220.8865912334295 5079.407412701435 4804.840324254876 1.2035747631959233 1.1476906357752097 1.1202754063900928 0.9855649410127825 1.1120392288221397 1.1424954792607045 1.248301417801049 1.1747259135016859 1.2947124506573797 1.0571438528478339 1.0 12.230272772428366 -7.311486332663795 5.119768110310042 1.154877504043104 1.1089044932750496 0.044408512821323076 0.08949845900180727 0.7257184255535754 43.81532444501219 0.017990166236928704 0.029316165888167954 4.881054617846275e-08 7.311486332663795 -0.04597301076805449 GTSGS(ph)LADVFANTR ddPTM_A549_PD325901_60min_R1 2 GTSGSLADVFANTR 14 0 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 GT(0.005)S(0.04)GS(0.956)LADVFANTR;GT(0.005)S(0.042)GS(0.953)LADVFANTR 174.59 9.186e-23 13130900.0 6381.9 6050.200000000001 7023.7 6053.0 7718.4 6452.1 6833.0 6592.6 7085.4 6580.1 7303.1 True False 7029.785789893527 6560.071587178745 7500.3705189392 6426.8800626395905 7176.286211034476 6399.556236786935 7093.033554161068 6461.105421205352 6787.625278142215 6164.631363033111 6404.864998165236 1.0975697055140599 1.0242326089711447 1.1710427184784984 1.003437240984886 1.1204430090392576 0.9991711361004765 1.1074446621736709 1.0087808912531688 1.0597608661676126 0.9624920064355855 1.0 12.644952446403067 -14.999999999793 0.11622919509655791 0.7782950812924918 1.1026732054048438 0.2951726485035605 0.05221012331413876 89.95607178100423 0.7329117058346998 4.707703796473699 0.1904740289410854 1.0000000004766365e-15 14.999999999793 0.324378124112352 GTSPS(ph)SSSRPQR ddPTM_A549_PD325901_60min_R1 1 GTSPSSSSRPQR 12 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GT(0.085)S(0.375)PS(0.527)S(0.011)S(0.001)S(0.001)RPQR 58.071000000000005 0.0035957999999999997 271470000.0 1373.8 1546.4 1910.8 1441.9 1870.7 1939.3 1632.9 1775.5 1574.1 1760.9 2102.0 True False 1513.2671646618924 1676.720555091272 2040.4783785738343 1530.9628882075037 1739.3084855646493 1923.5069837728656 1695.0409030571664 1740.0862596471943 1507.9460510802014 1649.7164734829269 1843.4673256758517 0.8208809256258982 0.9095472058212656 1.1068698371563241 0.83048007788596 0.9434984072348471 1.0434179966100945 0.9194851893758034 0.9439203154898578 0.8179944553817131 0.8948986784336457 1.0 10.848206130438452 GTSPSSSS(ph)RPQR ddPTM_A549_PD325901_60min_R1 1 GTSPSSSSRPQR 12 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GTS(0.288)PS(0.002)S(0.002)S(0.008)S(0.699)RPQR 103.13 0.00016594 152310000.0 1767.0 2149.2 1847.9 2073.0 2026.3 2069.8 2076.1 2571.0 1996.3 2247.3 2585.5 True False 1946.3845392033509 2330.320626618055 1973.3096063254059 2201.044501875412 1883.9796783555096 2052.9442350400027 2155.1071215855104 2519.719388089518 1912.402453320251 2105.4050944733835 2267.4998908348803 0.8583835205772395 1.027704846221644 0.8702578616658035 0.9706922195550802 0.8308620811716287 0.9053778760201486 0.9504331754529931 1.1112324186978337 0.843396932917212 0.9285138680638196 1.0 11.146886765959664 -7.761449862370854 24.999996996840338 0.9426675912748872 0.9131523728132693 0.07503546889416923 0.07972749452056732 1.1124876854575387 2632735.823072116 0.013636799468003698 0.019513524893285335 1.7320089729892467e-08 7.761449862370854 -0.029515218461617865 GTSS(ph)PDYR ddPTM_A549_MK2206_60min_R1 2 GTSSPDYR 8 0 Q66K14-2;Q66K14;G3V133 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 GTS(0.024)S(0.976)PDYR;GTS(0.027)S(0.973)PDYR 139.02 0.0010918 304710000.0 4461.9 4392.299999999999 4563.1 3710.7 5853.4 5053.8 4502.7 4953.4 6428.9 6651.6 6546.0 True False 5214.959637018485 4615.849308969842 5210.216194820468 4619.821666579651 4992.372613952092 5588.5897615590675 5320.782306107149 5655.55961915129 4972.764414843716 5148.998940263167 4920.447539590816 1.059854737817642 0.9380954215708793 1.0588907112408215 0.9389027378927883 1.0146175878886126 1.1357889128158074 1.081361454074079 1.1493994344306342 1.0106325440586348 1.0464493115379008 1.0 12.264573826605508 -4.882672437028792 20.01184937507496 1.023022204159639 9.273657981214704 0.0 0.06672139446888715 2315.112966890413 395788.79636611126 0.00910009242278045 2026.241029348147 1.3101697349643271e-05 4.882672437028792 8.250635777055065 GTSS(ph)PDYR ddPTM_A549_PD325901_60min_R1 2 GTSSPDYR 8 0 Q66K14-2;Q66K14;G3V133 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 GTS(0.133)S(0.867)PDYR;GTS(0.011)S(0.989)PDYR 139.38 0.0010927 425140000.0 4628.2 4322.6 4600.9 4122.2 5395.8 4875.7 4955.0 4706.2 5160.7 5597.1 5363.6 True False 5098.051456899236 4686.880672166019 4913.144741459257 4376.818931804542 5016.81762249946 4835.993915733181 5143.565236480042 4612.331149057519 4943.813725817672 5243.6981507929395 4703.911202661754 1.0837899010539258 0.9963794957510895 1.0444807586246752 0.9304637658397711 1.0665204776103439 1.0280793381041475 1.0934656320828304 0.9805310836751311 1.0510006487835415 1.1147527929153385 1.0 12.199645110846422 GTT(ph)PPPPSWEPNSQTK ddPTM_A549_PD325901_60min_R1 2 GTTPPPPSWEPNSQTK 16 0 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 GT(0.143)T(0.857)PPPPSWEPNSQTK;GT(0.11)T(0.89)PPPPSWEPNSQTK 108.56 6.638e-07 6766300.0 2646.3 2344.8999999999996 2417.0 2305.8 2129.8900000000003 2012.06 2185.3 2400.8999999999996 3215.1 2870.9 3287.8999999999996 True False 2914.9504278969057 2542.5129524272666 2581.0321546017126 2448.2240291482517 1980.2938741216092 1995.6744504563678 2268.4627873420436 2353.0121660303857 3079.9805278114227 2689.63088404914 2883.5091437153346 1.0109038267661117 0.8817426356939856 0.8951010820364913 0.849043268853232 0.6867652486685187 0.6920992273619038 0.7867021307306076 0.8160238267871709 1.0681362098415055 0.93276308483753 1.0 11.493609881904304 -8.756383166161768 24.99524232170958 1.0321754369799359 0.8215532240277971 0.397332510131696 0.09245341919264197 74.16496291488983 366631.91105732124 0.016237181544926173 0.01813620245362132 1.752333783383616e-09 8.756383166161768 -0.2106222129521388 GTTATSAQANSTPTSVASVVTSAES(ph)PASR ddPTM_A549_MK2206_60min_R1 1 GTTATSAQANSTPTSVASVVTSAESPASR 29 0 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GTTATSAQANSTPTSVASVVT(0.001)S(0.006)AES(0.778)PAS(0.214)R 105.75 4.6726999999999996e-15 3020900.0 1129.8 1296.5 1036.3 1271.5 1764.9 1188.7 1278.1 1050.1 2058.9 2077.4 1844.6 True False 1320.4826190419967 1362.4863122007607 1183.2629227263153 1583.0175570798049 1505.2855479488921 1314.4874450048 1510.3142260056302 1198.954890796375 1592.562437387691 1608.1138971830392 1386.5349116298837 0.9523616087601848 0.9826556120387523 0.8533956936831685 1.1417076799162267 1.085645615788654 0.9480377551111272 1.0892724109126417 0.8647130921406033 1.1485916611472986 1.1598077218933402 1.0 10.437268227185315 -6.259742177230215 24.999279614220086 1.0544722930688444 0.9347894390928178 0.27664096925962744 0.09008876739790544 156.66089182393316 2307542.1442986443 0.012402802237671318 0.030992796975207914 5.498672105265518e-07 6.259742177230215 -0.11968285397602663 GTTVT(ph)PDKR ddPTM_A549_MK2206_60min_R1 1 GTTVTPDKR 9 1 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 GT(0.003)T(0.003)VT(0.994)PDKR 57.019 0.0088678 6476500.0 1919.7 1491.5 1791.6 1735.0 2303.8 2063.7 1866.1 1552.9 2528.6 2315.5 2341.4 True False 2243.698427841141 1567.41097928842 2045.6758200872985 2160.075077887111 1964.9140718254066 2282.0793642268086 2205.146214810349 1773.0283305567968 1955.8761373444638 1792.4269418154086 1759.9657606474093 1.2748534534079736 0.8905917457802376 1.1623384192058315 1.2273392620391208 1.1164501695206879 1.2966612278794207 1.2529483607676428 1.007422059111299 1.111314879571855 1.0184442117533345 1.0 10.781331646806091 -9.724524952538935 0.6389050607243866 1.0089130872347118 1.1558277251256517 0.2021088643917024 0.11303538269397882 0.8450358141476011 0.7335508516842767 0.05486479193226597 0.02682321088789174 1.8857106222250366e-10 9.724524952538935 0.14691463789093984 GTTVT(ph)PDKR ddPTM_A549_PD325901_60min_R1 2 GTTVTPDKR 9 1 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 GT(0.004)T(0.004)VT(0.992)PDKR;GT(0.033)T(0.029)VT(0.937)PDKR 68.069 0.0028587 16986600.0 7577.3 6644.200000000001 7103.200000000001 6254.3 6682.2 6553.3 6654.0 7250.4 6930.0 7170.6 7865.799999999999 True False 8346.541917886563 7204.130051821932 7585.265867011543 6640.613906454123 6212.865324338536 6499.932097539689 6907.221611208509 7105.785084171232 6638.756199724161 6717.847092257745 6898.356465414427 1.2099319540433657 1.0443255705819974 1.0995758054894673 0.9626371063524304 0.9006297884847404 0.9422435807902539 1.0012851098429791 1.0300692809652223 0.9623678093482416 0.9738329884717204 1.0 12.752036965156737 -5.113752317349929 0.9999610137863388 0.9785884608386453 1.366737955281766 0.7094399952318897 0.043640605156811806 1.0303029036975266 0.6526176045079528 0.006724767191554916 0.45805620714224143 7.695692084637522e-06 5.113752317349929 0.38814949444312075 GTTVT(ph)PDKRK ddPTM_A549_MK2206_60min_R1 2 GTTVTPDKRK 10 2 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 GT(0.052)T(0.101)VT(0.847)PDKRK;GT(0.016)T(0.016)VT(0.969)PDKRK 66.262 0.001782 9126900.0 1577.74 1627.04 1572.06 1227.49 2438.6 1394.06 1464.1999999999998 1275.1100000000001 2405.0 2990.6000000000004 2474.2 True False 1844.023939960455 1709.8493863502717 1795.001746889058 1528.2251051041198 2079.8851703938863 1541.5785038978656 1730.2261870882119 1455.8607473605998 1860.271339995821 2315.021382938097 1859.7878555538662 0.9915238098010288 0.919378724430405 0.9651647856117901 0.821720122830352 1.1183453877186829 0.8289001884243221 0.9303352433027533 0.782810116225341 1.0002599675229145 1.2447771266086995 1.0 10.860922348363289 -8.913501363897359 24.999999870192266 1.0001526659450761 0.9200450727736468 0.20641379121914916 0.11410702411288597 29.37688928699242 8485.615675631745 0.013839788588937576 0.014733547921799619 1.2203899881160804e-09 8.913501363897359 -0.08010759317142935 GTTVT(ph)PDKRK ddPTM_A549_PD325901_60min_R1 1 GTTVTPDKRK 10 2 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 GT(0.006)T(0.005)VT(0.989)PDKRK 69.45100000000001 0.0012429000000000001 5669100.0 1413.5 1183.6 1163.3 1372.2 1252.8 1548.1 1374.5 1193.3 1325.6 1230.7 1284.8 True False 1556.9974794362975 1283.3461258445618 1242.2485334911757 1456.9576775076891 1164.8076499253714 1535.4927868709185 1426.8073496552609 1169.4986953742593 1269.8896418981735 1152.9933919674238 1126.7777450182377 1.3818141921245493 1.1389523191406214 1.1024787621014551 1.2930302217533656 1.0337510259456875 1.3627290684961704 1.26627221380927 1.0379142652975721 1.1270098717450436 1.0232660318905764 1.0 10.137987259106227 -9.486874854364025 0.42614132713461544 0.9927224025584857 1.2206517218839148 0.33641370248203706 0.10964016353933775 0.8977314978599701 0.37721231164422875 0.08075346375265607 0.03992152588831266 3.2593060713841996e-10 9.486874854364025 0.22792931932542915 GTVEEQRPPELS(ph)PGAGDRER ddPTM_A549_MK2206_60min_R1 2 GTVEEQRPPELSPGAGDRER 20 2 O75427 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 GTVEEQRPPELS(1)PGAGDRER;GTVEEQRPPELS(1)PGAGDRER 84.68 1.462e-05 10053200.0 1758.51 1877.54 1842.44 1343.71 2073.84 1773.77 1680.6 1654.42 2463.3 2841.8 2660.8 True False 2055.303496558277 1973.098766378262 2103.725696562648 1672.9190103214344 1768.7808831992363 1961.4691640667659 1985.9432659612405 1888.9391014487576 1905.3664830817925 2199.835406284184 2000.049925655859 1.0276260958257326 0.9865247567413804 1.0518365914654813 0.8364386252872406 0.8843683652642897 0.9807101007358896 0.9929468462193549 0.9444459746820241 0.9526594604667092 1.0998902467711205 1.0 10.965820297960652 -10.770052301980984 0.9465535815702707 1.0007602344578685 0.9599654205519983 0.13395034271187778 0.06528434904714234 1.5735684307643238 2.4287059603577794 0.044697226469589714 0.010522638844665188 1.6980391456978865e-11 10.770052301980984 -0.04079481390587025 GTVPDDAVEALADS(ph)LGKK ddPTM_A549_MK2206_60min_R1 2 GTVPDDAVEALADSLGKK 18 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;E7EQ12;H0Y9H6;E7EQA0;A0A0A0MR45;H0YD33;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 GTVPDDAVEALADS(1)LGKK;GTVPDDAVEALADS(1)LGKK 129.32 7.617399999999999e-13 11577500.0 2406.75 2686.8 2545.96 2432.39 3251.9 2951.6 2757.38 2930.9 4742.200000000001 3216.8 3600.8 True False 2812.9505606119037 2823.5466437493287 2907.0154113136073 3028.325659194137 2773.549817765883 3263.936352886489 3258.360253895159 3346.364050504808 3668.0992717372937 2490.1226458353735 2706.6219829756524 1.0392846057946201 1.0431994794652224 1.0740382031914346 1.1188580002091038 1.024727440777175 1.2059077231383923 1.2038475540322506 1.2363618087612755 1.3552314637246077 0.9200112396551734 1.0 11.402277694058935 -7.265948054311576 24.711405443056606 1.1827651462769802 1.063134381007998 0.11655758075993461 0.11350022785458037 468.9182750162738 2570075.138093976 0.019337589753521726 0.031579363337952866 5.4206572266267255e-08 7.265948054311576 -0.11963076526898209 GTVPDDAVEALADS(ph)LGKK ddPTM_A549_PD325901_60min_R1 2 GTVPDDAVEALADSLGKK 18 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;E7EQ12;H0Y9H6;E7EQA0;A0A0A0MR45;H0YD33;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 GTVPDDAVEALADS(1)LGKK;GTVPDDAVEALADS(1)LGKK 135.21 3.6251e-13 23981900.0 2993.1000000000004 3038.3999999999996 2912.7 3044.6 3255.5 3328.8 2535.5 3148.7 2958.6 2986.9 3899.2 True False 3296.9573085962375 3294.4566312657253 3110.3733374879657 3232.6580272117117 3026.8449108653 3301.6913564601236 2631.989839978837 3085.8967083926364 2834.2603308086454 2798.306624252457 3419.62311906531 0.9641288509879413 0.9633975782004314 0.9095661215257335 0.9453258194415582 0.8851399132231365 0.9655132280666587 0.7696724897269505 0.9024084236616426 0.8288224263682418 0.8183084880468704 1.0 11.739621617312253 -5.7521184310143125 1.1117636935238293 0.9068696556444151 0.9769961775701088 0.11823686629777208 0.0653480220479987 1.9290777869630338 3.1544405531218946 0.011205616933988447 0.12848192276762102 1.7696263198609555e-06 5.7521184310143125 0.07012652192569369 GTYFPAILNPPPS(ph)PATER ddPTM_A549_MK2206_60min_R1 2 GTYFPAILNPPPSPATER 18 0 H0YGW5;F5H7J9;O75581 H0YGW5 LRP6 Low-density lipoprotein receptor-related protein 6 1 GTYFPAILNPPPS(0.956)PAT(0.044)ER;GTYFPAILNPPPS(0.992)PAT(0.008)ER 177.6 9.157799999999999e-31 21122400.0 8608.8 9755.0 9033.0 9211.9 14269.2 9989.7 9538.1 8509.900000000001 14550.300000000001 13332.0 13573.3 True False 10061.754975047575 10251.487833026167 10314.01522820303 11468.815913537903 12170.219582294934 11046.803423373824 11271.049306833818 9716.204385475741 11254.680282054558 10320.29194052387 10202.675005977399 0.98618793298353 1.0047843165660153 1.0109128461075552 1.1240989159037915 1.1928459521806603 1.0827359900126075 1.1047151164013844 0.9523193064351603 1.103110730809403 1.0115280487203173 1.0 13.31665983683405 -6.0283681019459285 22.245186154364227 1.0636856518740723 0.9985766671163995 0.19657202129646245 0.06274303381616186 253.22830240733856 198573.59984800743 0.00953950862666008 0.02533101844991687 9.367676791227526e-07 6.0283681019459285 -0.0651089847576728 GTYFPAILNPPPS(ph)PATER ddPTM_A549_PD325901_60min_R1 4 GTYFPAILNPPPSPATER 18 0 H0YGW5;F5H7J9;O75581 H0YGW5 LRP6 Low-density lipoprotein receptor-related protein 6 1 GTYFPAILNPPPS(0.904)PAT(0.096)ER;GTYFPAILNPPPS(0.802)PAT(0.198)ER;GTYFPAILNPPPS(0.802)PAT(0.198)ER;GTYFPAILNPPPS(0.988)PAT(0.012)ER 175.19 1.5846e-30 27699500.0 17971.1 16806.1 17507.3 18354.800000000003 21963.7 21309.3 18844.4 20409.5 25985.3 19886.8 20663.2 True False 19795.512842375407 18222.40902801307 18695.450657947295 19488.534309224713 20421.045482651563 21135.764125875896 19561.533954051345 20002.416511556996 24893.228207314885 18631.144054097473 18121.757394816977 1.092361651858177 1.0055541872128184 1.0316577057418503 1.07542187463555 1.1268799729375147 1.1663197815417703 1.0794501619167554 1.1037790693124447 1.373665239246312 1.0281091203343329 1.0 14.145435250046527 -6.879652236277871 1.1237683129803324 1.1687658280743003 1.0362041708416 0.0321463372910461 0.09831058924241264 0.7725073128735154 1.9116932277786345 0.021858724851591817 0.06072240033187348 1.3193127627247397e-07 6.879652236277871 -0.1325616572327002 GTYVPSS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 GTYVPSSPTR 10 0 Q9Y4P8-4;Q9Y4P8 Q9Y4P8-4 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 1 GTYVPS(0.002)S(0.996)PT(0.001)R;GTYVPS(0.001)S(0.997)PT(0.001)R 166.69 1.236e-09 156470000.0 5398.700000000001 5358.299999999999 4332.5 4164.2 5865.1 3985.2 4235.2 3945.4 6066.8 6388.3 6653.4 True False 6309.868574457452 5631.014582850245 4946.9136473142535 5184.429186938043 5002.351559450986 4406.911218838338 5004.681018683235 4504.6725322807515 4692.679486688837 4945.1785931329605 5001.177155501611 1.2616766769631822 1.1259378357864753 0.9891498528246166 1.0366417796727803 1.000234825504648 0.8811747878177955 1.000700607691485 0.9007224483790435 0.9383149888075035 0.9888029236662715 1.0 12.288051994853921 -4.930332266149525 0.8648856203332703 0.9630176159451386 1.6142821682676614 0.8204718362775087 0.042814953863222316 1.083594926494586 0.4057078606397908 0.006697328689925396 0.7651924702245652 1.1739990185609195e-05 4.930332266149525 0.6512645523225228 GTYVPSS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 GTYVPSSPTR 10 0 Q9Y4P8-4;Q9Y4P8 Q9Y4P8-4 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 1 GTYVPS(0.002)S(0.995)PT(0.003)R;GTYVPS(0.002)S(0.98)PT(0.019)R 169.82 2.0112999999999998e-10 189883000.0 11342.3 10481.2 9680.1 10875.0 10920.7 11362.5 10146.8 10932.900000000001 12048.099999999999 13174.2 13753.5 True False 12493.761946240053 11364.4875077746 10337.04979717006 11546.724051083025 10153.667706369743 11269.967567224863 10532.942026542014 10714.834732805866 11541.760255396346 12342.37876367697 12061.906690619813 1.0358032329959972 0.9421800217218083 0.8569996487544442 0.9572884575589172 0.8417962405782784 0.9343437862928572 0.873240217878088 0.8883201476876351 0.9568769309392876 1.0232527145376835 1.0 13.558170359397355 -9.19481260103127 1.6867366647699231 0.9863398483431748 0.9137431467940481 0.2942280095115387 0.05307787957177182 0.31049503351236984 1.8245794724758417 0.010700765846000748 0.009801668082668568 6.385389576361955e-10 9.19481260103127 -0.07259670154912667 GVAGPGPIGREPDPDS(ph)DWEPEER ddPTM_A549_MK2206_60min_R1 2 GVAGPGPIGREPDPDSDWEPEER 23 1 Q9NPE2;Q9NPE2-3 Q9NPE2 NGRN Neugrin 1 GVAGPGPIGREPDPDS(1)DWEPEER;GVAGPGPIGREPDPDS(1)DWEPEER 95.823 1.2692999999999999e-07 22890000.0 3673.2 3024.3 3240.3 3432.3 4016.1000000000004 3557.0 3656.3999999999996 3264.1000000000004 5554.5 4695.4 5641.0 True False 4293.146358882158 3178.223952170277 3699.8232640259366 4273.213654081801 3425.3370100955012 3933.399379054491 4320.720550791791 3726.7961708870084 4296.414618713843 3634.705878903073 4240.184016320167 1.012490576436811 0.7495485903294571 0.8725619571663824 1.0077896708337435 0.8078274426090053 0.9276482727907837 1.0189936413518008 0.8789232157243259 1.0132613589828292 0.8572047498206088 1.0 12.049911161165609 -7.99341091252855 0.722119554776544 1.0069982247900335 0.8819654948116128 0.0 0.09263681542106349 0.5757588964358761 0.609204654115706 0.016716333746763526 0.027000477408508576 1.0152876126674474e-08 7.99341091252855 -0.12503272997842074 GVAGPGPIGREPDPDS(ph)DWEPEER ddPTM_A549_PD325901_60min_R1 2 GVAGPGPIGREPDPDSDWEPEER 23 1 Q9NPE2;Q9NPE2-3 Q9NPE2 NGRN Neugrin 1 GVAGPGPIGREPDPDS(1)DWEPEER;GVAGPGPIGREPDPDS(1)DWEPEER 140.9 1.5877e-27 56342000.0 9182.3 8676.3 8426.7 8219.9 9264.8 8898.0 8571.8 7994.400000000001 10633.7 10483.6 12869.9 True False 10114.480336348008 9407.482250477498 8998.586535863571 8727.624554252632 8614.072409824861 8825.537638122498 8898.004539668935 7834.945420514524 10186.802568687855 9821.663706857633 11286.983889017909 0.8961189663953776 0.8334806129767633 0.7972534225568516 0.7732468337041306 0.7631863830519191 0.7819217006865433 0.7883420962730867 0.6941575798772802 0.9025265446333705 0.8701761075794558 1.0 13.46237239978911 -9.090533877801247 2.4065229179138954 0.9644260757336383 0.7910700356567981 0.47904328375679484 0.058124385578485045 0.11454608029895165 1.3677206069823369 0.010686010604648088 0.01039520898283872 8.118319182827246e-10 9.090533877801247 -0.17335604007684013 GVAPADS(ph)PEAPR ddPTM_A549_MK2206_60min_R1 3 GVAPADSPEAPR 12 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPR;GVAPADS(1)PEAPR;GVAPADS(1)PEAPR 183.39 3.5678000000000004e-19 85356500.0 11947.1 11486.0 11329.100000000002 9959.2 17451.199999999997 14569.099999999999 13864.2 14630.9 19404.4 16621.100000000002 16419.8 True False 13963.478401448623 12070.588339327383 12935.736734399978 12399.204447085482 14884.151597464852 16110.792491814123 16383.145678888397 16704.874880252064 15009.334382459436 12866.381966144709 12342.310496573984 1.131350439232966 0.9779844983382953 1.0480806440569388 1.0046096677382481 1.2059453213072577 1.3053303509327696 1.3273969799606062 1.3534641576947082 1.2160878942906008 1.0424613746118443 1.0 13.591324873706702 -6.758277108529333 24.996438391162666 1.1625420016642578 1.0365814813884113 0.28373664965993617 0.11408785535453418 128.06839128126987 1012309.2365636969 0.02073598313596677 0.04176407348631293 1.7447085585283015e-07 6.758277108529333 -0.12596052027584648 GVAPADS(ph)PEAPR ddPTM_A549_PD325901_60min_R1 4 GVAPADSPEAPR 12 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPR;GVAPADS(1)PEAPR;GVAPADS(1)PEAPR;GVAPADS(1)PEAPR 184.43 3.2265999999999996e-19 127084000.0 16790.600000000002 16797.1 16420.2 16356.099999999999 19630.699999999997 17454.2 17384.800000000003 16880.8 20409.4 18167.6 19788.3 True False 18495.169351413595 18212.650566427576 17534.57351468393 17366.379149601755 18251.9073542385 17312.05878212156 18046.388077327592 16544.09920126859 19551.663893600326 17020.49463549798 17354.464548368927 1.0657297607693623 1.049450446348649 1.0103782496897566 1.0006865438688484 1.0517125033370114 0.9975564923867759 1.0398700592017802 0.9533050792295116 1.1266071528226955 0.9807559655937448 1.0 14.083019232740794 -8.763026796730717 24.999991435376057 1.0597867040917868 1.0218573956427808 0.0 0.046765532457643706 75.62586894326401 1191015.2734667182 0.008904612406298805 0.00973026977643034 1.7257314080525659e-09 8.763026796730717 -0.037929308449005994 GVAPADS(ph)PEAPRR ddPTM_A549_MK2206_60min_R1 6 GVAPADSPEAPRR 13 1 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR 202.4 4.7673e-31 235839500.0 12647.390000000001 14138.949999999999 12388.880000000001 11428.66 15382.01 12115.300000000001 11787.89 11821.76 18071.36 19270.640000000003 18798.24 True False 14781.960233001913 14858.562162661745 14145.809474192405 14228.682213052043 13119.336705425434 13397.33300451473 13929.59702808036 13497.53068262161 13978.225814031972 14917.389039959266 14130.118202969395 1.0461313925806746 1.0515525736748097 1.0011104840736373 1.0069754554538641 0.9284661682920989 0.9481401933141173 0.9858089527625539 0.9552312647876612 0.9892504516412677 1.0557157998030355 1.0 13.786485913878378 -5.900690928525956 2.1757117246203186 0.983881572000782 1.0515092509672321 0.37514472264746146 0.03195574047205826 0.21414360708855093 1.9571034893375412 0.003742596529686328 0.017047487314033855 1.2569241523530738e-06 5.900690928525956 0.06762767896645017 GVAPADS(ph)PEAPRR ddPTM_A549_PD325901_60min_R1 5 GVAPADSPEAPRR 13 1 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR 200.19 6.732099999999999e-31 314957200.0 12293.1 12658.500000000002 12954.9 13159.93 14601.96 13541.890000000003 13390.53 14877.7 14378.59 13084.25 14782.05 True False 13541.08646229809 13725.276220009611 13834.097418142224 13972.788987730482 13576.3687036273 13431.60933763932 13900.113946729172 14580.952602170137 13774.307865193625 12258.10822202793 12963.951561135453 1.044518440109945 1.0587262807396265 1.0671204187167265 1.0778186667728238 1.0472400054569633 1.036073705945173 1.0722127339938723 1.124730567945215 1.0625084335001322 0.9455533804041997 1.0 13.66221791480255 -10.401319828962498 0.9269162696085343 1.002737446382663 1.0654940049231945 0.5691531972826281 0.0286809384868711 0.33331410580841164 0.5461933844961682 0.012478481566585195 0.00444514109562743 3.968991520245123e-11 10.401319828962498 0.06275655854053142 GVDLLLEGVQGES(ph)SPTRR ddPTM_A549_MK2206_60min_R1 1 GVDLLLEGVQGESSPTRR 18 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.364)S(0.272)PT(0.364)RR 89.66799999999999 2.6274e-06 6845400.0 1001.6 888.58 819.47 567.92 1150.8 983.66 996.87 1022.6 1079.2 1065.0 1175.2 True False 1170.6455932310719 933.804926567954 935.6831682780406 707.0604254948979 981.5188444555423 1087.7502482993373 1177.9883753057136 1167.556681581157 834.7629231282705 824.4157603253769 883.3654061300225 1.3252110452905426 1.0570992706844888 1.0592255048533308 0.8004167025200732 1.11111306560614 1.2313706658094232 1.3335233269620765 1.321714291140471 0.9449803188301464 0.9332669749170948 1.0 9.786866525229662 -8.808870751972572 24.999866613707333 0.9740183823828765 1.1437261549841258 0.2502007281648355 0.14926174046281077 143.64159126281757 75709.14219588433 0.027720684652368845 0.029510949690549935 1.5528490761972304e-09 8.808870751972572 0.16970777260124925 GVDLLLEGVQGES(ph)SPTRR ddPTM_A549_PD325901_60min_R1 2 GVDLLLEGVQGESSPTRR 18 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.458)S(0.458)PT(0.084)RR;GVDLLLEGVQGES(0.532)S(0.405)PT(0.064)RR 104.06 2.5302e-09 29570000.0 1092.81 1062.3899999999999 1138.51 965.06 1221.1100000000001 1452.37 907.85 1521.27 1088.68 1458.24 1339.0700000000002 True False 1203.7512667157973 1151.9213337580293 1215.7761350167964 1024.6695643897183 1135.3434462008076 1440.5423802517385 942.3987285445816 1490.9270764367725 1042.9265655866818 1366.1664775352046 1174.3728790641128 1.0250162347712737 0.9808820982616904 1.035255630209784 0.8725248876713699 0.9667657235967433 1.2266482017191531 0.8024697652210793 1.2695516926659016 0.8880710583318444 1.1633157593216363 1.0 10.19767484077984 GVDLLLEGVQGESSPT(ph)RR ddPTM_A549_MK2206_60min_R1 1 GVDLLLEGVQGESSPTRR 18 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.308)S(0.308)PT(0.383)RR 56.528999999999996 0.0052287 8154600.0 269.99 253.94 240.29 322.31 553.84 303.96 268.88 321.53 740.52 466.03 437.6 True False 315.55771137825195 266.8644613345635 274.36673521365066 401.2759644690458 472.3708696674116 336.12484544768154 317.7320155609059 367.10786214432756 572.7934023674457 360.75349932810843 328.93184285440594 0.9593407212871338 0.8113062542646102 0.8341142433421769 1.219936510210905 1.4360752232689604 1.0218677599920278 0.9659509179886321 1.116060576436254 1.7413741320902743 1.0967424017010954 1.0 8.36164486746594 -6.318895305330256 4.634126718631217 1.2905746480349038 0.8613139499943874 0.2370990712391119 0.22744565629116148 0.21371676011686458 9.647512389183566 0.043138140223885894 0.10522394832638678 4.798491111455265e-07 6.318895305330256 -0.4292606980405165 GVDPNS(ph)R ddPTM_A549_PD325901_60min_R1 1 GVDPNSR 7 0 Q9UK76;J3KT51;Q9UK76-2;F2Z3M5 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GVDPNS(1)R 69.812 0.021736000000000002 5262000.0 1032.9 1197.9 938.06 849.96 1119.1 824.89 811.17 1105.5 990.62 1149.4 1072.3 True False 1137.7592476192085 1298.8512370304154 1001.7223926130257 902.4600988007837 1040.4982766854116 818.172369331408 842.0395182392557 1083.4499352520274 948.9876863738449 1076.8266878421693 940.4138978697508 1.2098494611750095 1.381148492140116 1.0651930972970012 0.9596413885897039 1.1064258823081778 0.8700130561498003 0.8953924651120796 1.1520990254464396 1.009117037214694 1.1450561186743669 1.0 9.877152049735045 -5.8812112724416155 5.2734441219854435 1.002852851116878 1.292856201215898 0.549321144038635 0.09522234388902506 0.08417435265640745 3.511948404753722 0.010869372843106375 0.035385276559705296 1.3145851667214004e-06 5.8812112724416155 0.29000335009902 GVDPNS(ph)RNSSR ddPTM_A549_MK2206_60min_R1 3 GVDPNSRNSSR 11 1 Q9UK76;J3KT51;Q9UK76-2;F2Z3M5 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GVDPNS(0.512)RNS(0.403)S(0.085)R;GVDPNS(0.537)RNS(0.417)S(0.046)R;GVDPNS(0.446)RNS(0.446)S(0.107)R 59.306000000000004 0.0027118000000000003 106169000.0 2720.7 3413.6899999999996 2254.46 2361.63 3132.33 2272.25 1998.5399999999997 2181.6499999999996 3161.65 3890.35 3876.83 True False 3179.8876452713434 3587.43223995111 2574.1763280609566 2940.2294560175987 2671.568406372461 2512.697986802521 2361.6488484792217 2490.905568522914 2445.541323117586 3011.5172330345813 2914.106115935209 1.0912051650702632 1.2310575172036295 0.8833502369678943 1.0089644436554797 0.9167711469954788 0.8622534275819033 0.810419646547878 0.8547751761344219 0.8392080541421023 1.0334274433476183 1.0 11.508837698147575 -5.767551812902595 24.987363552115905 0.9094755068917973 1.1611313628848705 0.6132540303188616 0.07624338308723638 63.69550024883288 260389.4676932552 0.011029620094910151 0.035594391232670844 1.7078439559435965e-06 5.767551812902595 0.25165585599307316 GVDPNSRNS(ph)SR ddPTM_A549_PD325901_60min_R1 2 GVDPNSRNSSR 11 1 Q9UK76;J3KT51;Q9UK76-2;F2Z3M5 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GVDPNS(0.154)RNS(0.746)S(0.1)R;GVDPNS(0.045)RNS(0.946)S(0.008)R 111.74 1.6629e-05 152495000.0 5018.8 5035.799999999999 4761.8 4207.299999999999 6390.5 5483.6 5667.1 4762.3 4675.0 6219.2 6373.2 True False 5528.304881354715 5460.184539141636 5084.964383029557 4467.17536552842 5941.653326028166 5438.943379681788 5882.764591656111 4667.312190547921 4478.5260077504245 5826.518650624691 5589.336803043459 0.9890806505602754 0.9768930968998866 0.9097616698032465 0.7992317376716305 1.0630336899348891 0.973092796397637 1.0524977826444235 0.8350386378588807 0.8012625049382986 1.04243470306747 1.0 12.448461396402895 -8.27742933951188 24.83375489897728 0.8981960295022686 0.9620302867386288 0.03661318971645855 0.0920722301547874 1509.7856079820383 2344818.926886657 0.01629396753029154 0.01973274622229622 5.279230938249574e-09 8.27742933951188 0.06383425723636016 GVEEEEEDGEMRE ddPTM_A549_MK2206_60min_R1 2 GVEEEEEDGEMRE 13 1 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F 0 ; 71.34899999999999 0.001355 4988700.0 849.24 660.6 718.1800000000001 708.4 1179.5500000000002 651.5 495.66999999999996 742.75 1206.58 897.09 907.0 False True 992.570950075435 694.2217183492662 820.0287231917251 881.9580318012847 1006.0397575404369 720.4412975693006 585.7268229435967 848.0370870764766 933.2915565123316 694.4367459439367 681.7668680734605 1.455880296559799 1.0182684886272058 1.2027993168822733 1.2936358058782251 1.4756360343284325 1.0567267658593127 0.8591306652943489 1.2438813424196795 1.3689306421557716 1.0185838861695915 1.0 9.413134680089268 GVEEEEEDGEMRE ddPTM_A549_PD325901_60min_R1 2 GVEEEEEDGEMRE 13 1 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F 0 ; 90.15 0.00010971 7683200.0 1170.75 993.19 1139.33 1151.8400000000001 1447.6 1235.04 1019.51 1234.74 1211.46 1161.64 1527.93 False True 1289.603678139402 1076.889606900608 1216.651785147857 1222.9865407815605 1345.925569948889 1224.9822437162068 1058.3080109472778 1210.1121420652078 1160.546549165632 1088.2938521532776 1340.0042963462924 0.9623877189466372 0.8036463836995873 0.9079461823109275 0.912673596731147 1.0044188467296276 0.9141629225042717 0.7897795655080371 0.9030658672996396 0.8660767374627255 0.8121569871982215 1.0 10.388021910947787 -10.826906876312972 1.0434602728091826 1.0007334226169589 0.8932944541666493 0.0 0.08043416378172268 0.5286659044736102 1.0103592952409564 0.0420330568780741 0.010088959136262836 1.489680468519563e-11 10.826906876312972 -0.10743896845030954 GVEFPMADLDALS(ph)PIHTPQR ddPTM_A549_MK2206_60min_R1 1 GVEFPMADLDALSPIHTPQR 20 0 Q6ZVM7-2;Q6ZVM7-5;Q6ZVM7 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 GVEFPMADLDALS(0.969)PIHT(0.031)PQR 48.181999999999995 0.004089199999999999 1143500.0 474.97 320.62 411.79 213.39 554.57 395.22 443.65 549.24 769.59 835.79 487.85 True False 555.1333240984046 336.9381885212559 470.18801403982394 265.6705595794411 472.993487634437 437.04191807419653 524.2554623013831 627.0964519769554 595.2790937826963 646.9844585186353 366.70338102495873 1.513848393071186 0.9188303297872321 1.2822025603516913 0.7244835289952205 1.289853085925717 1.1918131675051298 1.429644474059815 1.7100918192359773 1.6233258938569213 1.7643264065640014 1.0 8.518469757611744 -7.3079763556406485 2.3689548873658226 1.3459458790870988 1.1097108750989564 0.18146602169492365 0.2896524268428817 0.5526636561959462 6.0731884304494335 0.04816308838317667 0.08466047602821712 4.920663245926207e-08 7.3079763556406485 -0.23623500398814246 GVEFPMADLDALS(ph)PIHTPQR ddPTM_A549_PD325901_60min_R1 2 GVEFPMADLDALSPIHTPQR 20 0 Q6ZVM7-2;Q6ZVM7-5;Q6ZVM7 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 GVEFPMADLDALS(0.997)PIHT(0.003)PQR;GVEFPMADLDALS(0.997)PIHT(0.003)PQR 96.708 3.4128999999999995e-07 6734300.0 1301.57 1028.04 884.31 1231.1 1018.01 1369.26 1416.71 1477.42 1386.65 1452.56 1292.51 True False 1433.7044282348086 1114.6765387066932 944.3245943880191 1307.142250969039 946.5084895438442 1358.1092005367066 1470.6236743034585 1447.9516990864317 1328.373922705269 1360.8451137045597 1133.5394638959551 1.2648032767268567 0.9833592690946724 0.8330760634855995 1.1531510746669675 0.8350026793868396 1.19811373471631 1.297373158274482 1.27737211204791 1.1718814959822141 1.2005273367610503 1.0 10.146618903685999 -7.309790599725522 24.99864867378908 1.1247331012226152 1.009875130028009 0.20440744866230454 0.14462235126284784 674.3286679468081 348641.451577501 0.02316421169390604 0.03703057954590804 4.900150290203745e-08 7.309790599725522 -0.11485797119460606 GVEFPMADLDALSPIHT(ph)PQR ddPTM_A549_MK2206_60min_R1 1 GVEFPMADLDALSPIHTPQR 20 0 Q6ZVM7-2;Q6ZVM7-5;Q6ZVM7 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 GVEFPMADLDALS(0.393)PIHT(0.607)PQR 51.175 0.0034595 884390.0 202.72 386.66 212.81 223.25 592.1 197.95 368.83 415.8 509.29 394.16 408.81 True False 236.9341799718479 406.33934244160935 242.98965799998763 277.9462600220733 505.00287435012694 218.89693761142442 435.84163678715004 474.74092333409504 393.9366281690111 305.1189822439912 307.29119441798383 0.7710412282415263 1.3223266719738744 0.7907472209225367 0.9045044735125246 1.6434017099208238 0.7123436713701476 1.418334285864076 1.544921989168172 1.2819652346860626 0.9929310952820928 1.0 8.263462616153952 GVEGELGNEES(ph)LDRNEEGLDR ddPTM_A549_PD325901_60min_R1 1 GVEGELGNEESLDRNEEGLDR 21 1 Q92667;Q92667-2 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 GVEGELGNEES(1)LDRNEEGLDR 49.638000000000005 0.0036524 951850.0 356.66 373.48 325.03 387.15 236.96 265.92 443.23 206.77 387.12 481.2 372.07 True False 392.86786064078507 404.9544703281742 347.08849036416854 411.0633762185556 220.3167470676214 263.75443568549497 460.0973601947623 202.64581014207297 370.85069264606295 450.8169498778942 326.3077487460581 1.2039795626996461 1.2410200857452551 1.0636844871075453 1.2597413876875376 0.6751808619754173 0.8082996395245156 1.410010525226059 0.6210266563414578 1.1365059336505963 1.3815698573212023 1.0 8.350089436918804 GVEGPQGS(ph)PRPPAPIQQLNR ddPTM_A549_PD325901_60min_R1 1 GVEGPQGSPRPPAPIQQLNR 20 1 H3BLX4;Q96JM2-2;Q96JM2;Q96JM2-3 H3BLX4 ZNF462 Zinc finger protein 462 1 GVEGPQGS(1)PRPPAPIQQLNR 49.765 0.0041378 5137900.0 3572.5 3682.8 2893.2 3124.4 3625.5 2915.4 2980.1 3364.1 3474.9 4055.9 4243.5 True False 3935.1775700644994 3993.162480787722 3089.5499502249377 3317.3870919727638 3370.8573872960037 2891.6579489977908 3093.5093362732905 3297.0003864146047 3328.862037290258 3799.809781815778 3721.576401762834 1.0573953468214403 1.0729760858587354 0.8301723830690354 0.8913929834683458 0.9057606302800335 0.7769981418702225 0.8312362833147693 0.8859150076437726 0.8944763395730488 1.0210215703259207 1.0 11.861698138593683 -5.742830317418445 24.97171887334806 0.9126050582893797 1.0651858633408688 0.4601669506370103 0.0693190775430934 195.33734774757733 262121.1859818194 0.01065238370062147 0.0411089970275806 1.8078803424060463e-06 5.742830317418445 0.1525808050514892 GVEPS(ph)PSPIKPGDIK ddPTM_A549_MK2206_60min_R1 1 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.683)PS(0.317)PIKPGDIK 132.79 5.739400000000001e-10 168210000.0 5115.6 4931.8 4617.2 5126.7 6976.6 5641.3 4271.4 5635.4 5343.8 6159.2 7138.5 True False 5978.9882155879295 5182.807554579034 5271.988388316066 6382.741730146312 5950.351381846139 6238.258621608127 5047.458090102848 6434.235207688692 4133.437832295085 4767.832442249824 5365.8134374227075 1.114274337957553 0.965894102547931 0.9825142915979377 1.1895198751472158 1.1089374334833741 1.162593275811779 0.940669695092349 1.1991164588046441 0.7703282793000806 0.8885572519159176 1.0 12.389581179442393 -8.761416628974075 24.999999999985842 0.8915439130487885 1.0780228987446796 0.44817094754400466 0.09702056226719094 0.4832803383354195 530042.1347450485 0.019285151959499206 0.02118478008951884 1.732141516105088e-09 8.761416628974075 0.18647898569589105 GVEPS(ph)PSPIKPGDIKR ddPTM_A549_MK2206_60min_R1 1 GVEPSPSPIKPGDIKR 16 2 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.674)PS(0.326)PIKPGDIKR 123.55 1.1057999999999999e-08 129310000.0 3383.6 5132.3 4053.6 3942.6 5358.2 3600.4 3635.6 3416.0 5954.1 5814.7 6071.7 True False 3954.668958922378 5393.512148174293 4628.461433526386 4908.537176990038 4570.015877964619 3981.391938247903 4296.14146003135 3900.2284610612496 4605.505856743917 4501.155231515463 4563.929319604887 0.8665053032120019 1.1817694294707495 1.0141395953798613 1.0755068348462034 1.0013336223971714 0.8723605602622664 0.9413251518985575 0.8545768761815322 1.0091098117931918 0.9862456046767047 1.0 12.156060733816046 -6.9889427067333525 20.65986326733481 0.9767672298609825 1.0429072657096206 0.14125239498139386 0.08584006457412889 47.66884453643127 89059.1856836051 0.012186297113300559 0.02299555130144349 1.0257872418678813e-07 6.9889427067333525 0.06614003584863803 GVEPS(ph)PSPIKPGDIKR ddPTM_A549_PD325901_60min_R1 2 GVEPSPSPIKPGDIKR 16 2 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.553)PS(0.447)PIKPGDIKR;GVEPS(0.5)PS(0.5)PIKPGDIKR 100.39 4.2891000000000005e-07 225444000.0 8634.5 10641.0 11408.2 10061.099999999999 11205.2 12954.7 12298.5 12560.7 12939.2 12307.4 13211.400000000001 True False 9511.068083617052 11537.754414592742 12182.429055079547 10682.551296584037 10418.185407841458 12849.201218317097 12766.52614749743 12310.16698482147 12395.410421280076 11530.308663605978 11586.481553964783 0.8208762978923879 0.9957944834982828 1.0514347257482006 0.9219840593392712 0.8991673062541109 1.1089821494533192 1.101846672610362 1.0624594642891438 1.0698166102925772 0.9951518595099663 1.0 13.500154911788112 -7.256209142914879 24.994193141869122 1.046684791316074 0.9464991051791337 0.45589818236742075 0.0636801165901428 381.45859320644644 1822908.4794989727 0.009691407624239838 0.01648031374629117 5.5435868651037046e-08 7.256209142914879 -0.10018568613694023 GVEPSPS(ph)PIKPGDIK ddPTM_A549_MK2206_60min_R1 2 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.012)PS(0.988)PIKPGDIK;GVEPS(0.009)PS(0.991)PIKPGDIK 137.69 2.119e-10 202297200.0 6091.84 6660.469999999999 7016.5599999999995 6978.2 8583.9 6198.150000000001 6633.099999999999 7015.7 8696.33 8831.7 9881.0 True False 7119.993660811475 6999.459473832475 8011.613715221992 8687.859313263298 7321.219681023571 6854.034119001018 7838.24840976289 8010.196959680152 6726.625140185393 6836.6128361179635 7427.274998273275 0.9586279843504868 0.9423993962065145 1.0786747113961133 1.1697236624849745 0.9857208306849605 0.9228194890581638 1.0553330005399235 1.0784839610142882 0.9056652866292454 0.9204739070126485 1.0 12.85861728040879 -8.763642590352937 24.99975675158402 0.9554530546670505 1.024334004688367 0.19976811544657924 0.07166701050047135 86.1229324971119 977230.5542097819 0.01340141194824763 0.014606049552082742 1.7232861977433884e-09 8.763642590352937 0.06888095002131656 GVEPSPS(ph)PIKPGDIK ddPTM_A549_PD325901_60min_R1 4 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.013)PS(0.987)PIKPGDIK;GVEPS(0.127)PS(0.873)PIKPGDIK;GVEPS(0.207)PS(0.793)PIKPGDIK;GVEPS(0.027)PS(0.973)PIKPGDIK 157.88 4.4647000000000004e-20 599924000.0 47835.1 46207.2 46890.2 45760.3 56235.0 47158.6 48597.3 50714.6 49276.6 47593.3 50430.5 True False 52691.28413766058 50101.24290818252 50072.45094567867 48586.80980181836 52285.24760021814 46774.55599698402 50446.69684496296 49703.05751816597 47205.675865992416 44588.25091567662 44227.86820527883 1.1913593459467622 1.1327980511211406 1.1321470597061756 1.0985564480817385 1.1821787873098895 1.057581065853887 1.1406088263359226 1.123795008329921 1.0673287630977921 1.008148317452813 1.0 15.432668085186606 -9.504467456188351 0.2590760257216623 0.9622661131119358 1.1651616823421551 0.7009471183907781 0.03323201031326731 0.882141952590811 0.15450101137555197 0.06388968792744329 0.030834424756907636 3.12991500263015e-10 9.504467456188351 0.20289556923021934 GVEPSPS(ph)PIKPGDIKR ddPTM_A549_MK2206_60min_R1 3 GVEPSPSPIKPGDIKR 16 2 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.017)PS(0.983)PIKPGDIKR;GVEPS(0.014)PS(0.986)PIKPGDIKR;GVEPS(0.025)PS(0.975)PIKPGDIKR 129.15 1.065e-10 145463000.0 10494.699999999999 12680.199999999999 13043.0 11416.4 19232.9 13155.499999999998 12853.8 11849.3 20943.6 18231.7 18134.2 True False 12265.948789219374 13325.568018486765 14892.693526121133 14213.418512501676 16403.765887668575 14547.606278085846 15189.16907771783 13528.97456195933 16199.908040056758 14113.146307534429 13630.97766154106 0.8998583295919391 0.9775944432866333 1.0925623895738545 1.0427292058884328 1.2034181476175962 1.0672459921294566 1.1143125207059146 0.9925168170534441 1.188462665136909 1.0353730053680432 1.0 13.73460142055346 -5.554956734459977 2.214724877935587 1.0898424338353874 0.8936691992740794 0.4314622319458339 0.06527467380508026 0.30034517706700226 2.462042206786569 0.0106664972830589 0.09023816922428682 2.7863987430557817e-06 5.554956734459977 -0.19617323456130797 GVEPSPS(ph)PIKPGDIKR ddPTM_A549_PD325901_60min_R1 2 GVEPSPSPIKPGDIKR 16 2 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.025)PS(0.975)PIKPGDIKR;GVEPS(0.178)PS(0.822)PIKPGDIKR 94.057 2.3372e-06 224775000.0 10262.3 10502.2 10412.3 10949.900000000001 12330.9 12275.2 11361.400000000001 12487.8 12523.3 10901.5 13322.599999999999 True False 11304.12114129404 11387.257251474108 11118.941292246353 11626.250453972787 11464.820123295634 12175.234841029594 11793.764294196639 12238.721032510422 11996.989251948857 10213.177429538377 11684.004658919657 0.967486873831772 0.9746022518726908 0.9516378687642912 0.9950569854572268 0.9812406326407362 1.0420429635600092 1.0093940081745165 1.0474765621705988 1.0267874416491494 0.874116172295563 1.0 13.512247218094409 -6.8390219022863885 1.821762802941106 1.0171852959149494 0.9673827023635213 0.0 0.04631632557062158 0.1813301115972355 1.2196945902553966 0.0027385034192410093 0.006258079912085065 1.4486987911015437e-07 6.8390219022863885 -0.04980259355142813 GVGDDQLGEES(ph)EERDDHLLPM ddPTM_A549_MK2206_60min_R1 5 GVGDDQLGEESEERDDHLLPM 21 1 H0YF90;F5GX30;P20645 H0YF90 M6PR Cation-dependent mannose-6-phosphate receptor 1 GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM 138.93 6.6917e-19 89085100.0 4850.35 4356.599999999999 3424.84 3735.4100000000003 5107.25 5179.279999999999 3924.57 4024.4799999999996 6087.490000000001 5650.98 5679.209999999999 True False 5668.970500327805 4578.332331456876 3910.53381093312 4650.58561768893 4355.980290533163 5727.347971872179 4637.6135685430845 4594.962364453097 4708.683234723977 4374.41969322394 4268.905418777816 1.327968166123209 1.0724838998114063 0.9160507032392166 1.0894093828437148 1.0203974703614485 1.3416432106176563 1.0863706532694346 1.0763795197338035 1.1030188708355289 1.0247169389094437 1.0 12.059650483468815 -10.467416034457433 0.6599307068477006 0.9943456096411412 1.1106652558703045 0.10139503786875348 0.11703410227346285 1.5859901157017193 1.164182757900477 0.10024170397146467 0.02431004369343958 3.408662207575491e-11 10.467416034457433 0.11631964622916335 GVGDDQLGEES(ph)EERDDHLLPM ddPTM_A549_PD325901_60min_R1 4 GVGDDQLGEESEERDDHLLPM 21 1 H0YF90;F5GX30;P20645 H0YF90 M6PR Cation-dependent mannose-6-phosphate receptor 1 GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM 136.44 1.6927999999999998e-18 130669000.0 4509.9 5327.58 4622.800000000001 3813.9 3358.72 4730.320000000001 5037.9 4297.8 4921.87 5622.9400000000005 5188.54 True False 4967.741727987092 5776.553863743636 4936.531007154656 4049.475941004645 3122.815094154968 4691.797842252596 5229.62004134466 4212.077007441123 4715.020920163977 5267.906608783056 4550.382472864982 1.0917195988712867 1.2694655665080037 1.0848606763480586 0.8899199056678504 0.6862752994450599 1.0310776885747313 1.1492704344151583 0.925653400029282 1.0361812327382969 1.157684357347287 1.0 12.151772097778935 -5.999649068947322 11.881613288902937 0.9907696830914656 1.1798082904912548 0.2644544396046007 0.1278069990319107 0.07484909823671905 559.4221070338265 0.016532495630092067 0.04923098990998714 1.0008083751697956e-06 5.999649068947322 0.18903860739978917 GVGGS(ph)AERLEESVV ddPTM_A549_PD325901_60min_R1 2 GVGGSAERLEESVV 14 1 Q6PJG9 Q6PJG9 LRFN4 Leucine-rich repeat and fibronectin type-III domain-containing protein 4 1 GVGGS(1)AERLEESVV;GVGGS(1)AERLEESVV 73.92699999999999 0.00079668 16769900.0 830.49 1248.19 775.39 1310.42 889.81 1147.3799999999999 1274.95 1044.52 1038.55 990.16 1221.4 True False 914.8007334255758 1353.3793518231857 828.0126281988506 1391.3616672202493 827.3128152778534 1138.0361176926272 1323.4689199294103 1023.6862291899112 994.9033551549105 927.6411286182375 1071.1755430925243 0.8540157020244427 1.2634524383519141 0.7729943364916144 1.2989109732689896 0.7723410234790928 1.0624179435679364 1.2355294409621278 0.9556661704901237 0.9287958090254627 0.8660029017653843 1.0 10.064979211432163 GVGQADWT(ph)PDLGLR ddPTM_A549_PD325901_60min_R1 2 GVGQADWTPDLGLR 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GVGQADWT(1)PDLGLR;GVGQADWT(1)PDLGLR 101.3 3.1545e-05 5385400.0 2800.5 2788.8 2098.0 2775.1 2694.5699999999997 3274.8 2306.48 2509.06 3125.8 2450.5099999999998 3424.6 True False 3084.804698380864 3023.821963294453 2240.382896298882 2946.5116242906197 2505.312698961854 3248.1311145564778 2394.2543585542844 2459.0148299805064 2994.433496262305 2295.7843803933474 3003.3959103280317 1.027105579977946 1.00680098580949 0.7459499057698945 0.981060010822483 0.8341599888135371 1.081486161510327 0.7971823995367908 0.8187448153353623 0.9970159065493475 0.7643961864963055 1.0 11.552378949440149 -8.93151414169534 24.998469763357726 0.9986839676823338 0.9106206401853919 0.0 0.1228971156689387 71.21873281224042 25995.27543574938 0.016542852433887343 0.017611137898325108 1.1708084772989667e-09 8.93151414169534 -0.0880633274969419 GVGS(ph)PEPGPTAPYLGR ddPTM_A549_MK2206_60min_R1 1 GVGSPEPGPTAPYLGR 16 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 GVGS(1)PEPGPTAPYLGR 206.55 3.7354e-40 32150000.0 4868.2 5286.9 5265.2 4138.5 6837.5 4922.3 4676.6 4722.2 7138.6 6689.6 7651.2 True False 5689.833143937206 5555.980627824302 6011.884532219043 5152.432685784326 5831.712807581478 5443.174518841703 5526.277685109096 5391.58631113098 5521.7184980017355 5178.414713871024 5751.195877622562 0.9893304392701849 0.96605658128289 1.0453277301179742 0.8958889238726897 1.0140000326318568 0.9464422069192 0.9608919262533546 0.9374722102770323 0.9600991890201994 0.9004065978729427 1.0 12.489646259385012 -10.779411069046564 1.1170192509623453 0.9993626310536851 0.9677355970151608 0.0 0.047497156752888806 0.9079701462836847 2.0726847321924806 0.021265203600982267 0.005822550014419404 1.661838939494788e-11 10.779411069046564 -0.03162703403852429 GVGS(ph)PEPGPTAPYLGR ddPTM_A549_PD325901_60min_R1 2 GVGSPEPGPTAPYLGR 16 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 GVGS(1)PEPGPTAPYLGR;GVGS(1)PEPGPTAPYLGR 233.28 1.0875999999999999e-55 108572000.0 12534.3 13174.9 11611.2 12213.7 13854.5 13079.8 12567.6 13743.7 13478.4 13256.0 15260.900000000001 True False 13806.772908736026 14285.195060315576 12399.205855817716 12968.112509674733 12881.407715430287 12973.282445393874 13045.866895254598 13469.571121775925 12911.949720398583 12419.013897716888 13383.906046815706 1.0315951756117512 1.0673412537675655 0.9264265463644472 0.9689333191904841 0.9624550314663205 0.9693195992271981 0.9747428627802169 1.0064006034307602 0.9647370263384798 0.9279065359750949 1.0 13.708211602552637 -5.743771945031331 24.999982559194446 0.9778658602766043 1.0494682465406622 0.5683645301124551 0.026384279668299634 124.1240170726352 175636.6666842692 0.0031234588424464598 0.012044298315544627 1.8039647829034129e-06 5.743771945031331 0.0716023862640579 GVGS(ph)PPGR ddPTM_A549_MK2206_60min_R1 2 GVGSPPGR 8 0 O96028-5;O96028-3;O96028;H0Y9L4;O96028-6 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GVGS(1)PPGR;GVGS(1)PPGR 92.838 0.0025751 70168000.0 7025.0 7440.0 8063.9 7022.0 9003.0 6657.8 6689.5 6718.8 9999.5 10493.6 10569.5 True False 8210.648255239888 7818.664221190646 9207.48227595555 8742.390315229559 7678.670626201985 7362.323976910039 7904.895559709463 7671.210475462038 7734.629215920262 8123.0884718782845 7944.8014466399545 1.033461730967785 0.9841233004630147 1.1589317036802238 1.100391290323174 0.9665025208967907 0.9266844522620186 0.994977107080836 0.9655635231395714 0.973545942950081 1.0224407150305477 1.0 12.955795449418096 -6.76817557697257 24.998329064699966 0.980235282093222 1.0695556512343427 0.47364097250082093 0.04597027987050747 105.24236280184668 390560.65781982115 0.0065317841832904676 0.012542723299140003 1.705392791850668e-07 6.76817557697257 0.08932036914112074 GVGS(ph)PPGR ddPTM_A549_PD325901_60min_R1 2 GVGSPPGR 8 0 O96028-5;O96028-3;O96028;H0Y9L4;O96028-6 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GVGS(1)PPGR;GVGS(1)PPGR 80.219 0.0039493 94037000.0 19627.0 18459.1 18213.0 17864.6 20909.5 20353.7 18236.3 20109.2 21313.1 19691.1 22499.8 True False 21619.518591366264 20014.71313921708 19449.043703666117 18968.055768549686 19440.888853859014 20187.94621544774 18930.292375786274 19708.106230637783 20417.384525301735 18447.800585495843 19732.4672379836 1.0956317996438998 1.0143036295375256 0.9856366904908924 0.9612612320489514 0.9852234198284481 1.0230827180387951 0.9593474626095819 0.9987654353076069 1.0347101697450036 0.9348957919456282 1.0 14.268283733455121 -8.653129656825337 18.99420431294934 1.016416268864147 0.9999506174009092 0.0 0.043395163675538216 5.654999685250695 963.9216526282455 0.006182838823164212 0.007010667235639721 2.2226462297301906e-09 8.653129656825337 -0.01646565146323775 GVGS(ph)PPGRK ddPTM_A549_MK2206_60min_R1 2 GVGSPPGRK 9 1 O96028-5;O96028-3;O96028;H0Y9L4;O96028-6 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GVGS(1)PPGRK;GVGS(1)PPGRK 51.445 0.010886 17487300.0 5249.1 5459.7 5453.0 5017.0 6747.3 5531.7 4885.1 5440.5 7249.799999999999 7333.0 7897.799999999999 True False 6135.019751826295 5737.575409735823 6226.317396146478 6246.165225221687 5754.781108094259 6117.060822354718 5772.659436241377 6211.707535832473 5607.7318755516435 5676.470207010317 5936.558291808791 1.0334303901793298 0.9664817774387017 1.0488092746831938 1.052152597211096 0.9693800389418653 1.0304052485755901 0.9723916034323187 1.0463482763073901 0.944609923781788 0.9561887423631733 1.0 12.535411058384533 -8.764847270274508 24.99993126651847 0.9738435769905908 1.0132606044694168 0.2847624843340495 0.0333116818154932 99.06271582732211 726712.5564116809 0.005873789251879865 0.00637737921721322 1.718512635721592e-09 8.764847270274508 0.03941702747882603 GVGS(ph)PPGRK ddPTM_A549_PD325901_60min_R1 2 GVGSPPGRK 9 1 O96028-5;O96028-3;O96028;H0Y9L4;O96028-6 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GVGS(1)PPGRK;GVGS(1)PPGRK 47.082 0.014706 22999400.0 6162.299999999999 5646.8 5197.3 4659.5 6397.0 6148.3 5991.1 5899.7 6391.6 6260.9 6585.9 True False 6787.892159554508 6122.675653446321 5550.0200319037995 4947.306732507711 5947.696788451953 6098.230283262372 6219.094588955717 5782.025855274881 6122.983279387727 5865.5857055081215 5775.876051459848 1.1752143049951485 1.0600427708102946 0.9608966644118058 0.8565465547442423 1.0297479958817117 1.0558104483078457 1.0767361580385448 1.001064739575476 1.0600960312921097 1.0155317831007817 1.0 12.495824067423372 -6.963705665963089 24.999423017680343 1.032918613905802 1.004083541776044 0.012622076914037716 0.07485299167660636 622.4942613957792 428769.9212175981 0.011164181524875388 0.021098293587143123 1.0871621755117687e-07 6.963705665963089 -0.028835072129757888 GVGSGPHPPDTQQPS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 GVGSGPHPPDTQQPSPSK 18 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 GVGSGPHPPDTQQPS(0.999)PS(0.001)K;GVGSGPHPPDTQQPS(0.997)PS(0.003)K 166.91 2.1280000000000002e-24 200259000.0 12014.8 15205.2 12901.0 13893.699999999999 17185.9 12501.900000000001 12262.599999999999 13539.599999999999 23641.1 20723.4 24207.4 True False 14042.604506342528 15979.07973333978 14730.55579088314 17297.6571237119 14657.876876024067 13824.842759910427 14490.555690334597 15458.879763285973 18286.428597079102 16041.969546973633 18196.034489748046 0.7717398268427316 0.8781627525680205 0.8095475857216353 0.9506278488017645 0.8055533684706172 0.7597722881707868 0.796357893171659 0.8495741075889787 1.0049677916021749 0.8816189898965047 1.0 14.151336453856466 -8.729047974222437 4.942267551644813 1.002710509352642 0.8276100302714425 0.45375687039002877 0.061804724022852135 0.07242618143089352 4.251518823892853 0.008510801686262585 0.009481152653356308 1.866173533093893e-09 8.729047974222437 -0.17510047908119952 GVGSGPHPPDTQQPS(ph)PSK ddPTM_A549_PD325901_60min_R1 4 GVGSGPHPPDTQQPSPSK 18 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 GVGSGPHPPDTQQPS(0.956)PS(0.044)K;GVGSGPHPPDT(0.001)QQPS(0.975)PS(0.024)K;GVGSGPHPPDT(0.17)QQPS(0.75)PS(0.08)K;GVGS(0.001)GPHPPDT(0.077)QQPS(0.892)PS(0.031)K 163.04 1.7425e-23 308290900.0 30227.0 32744.6 31491.0 34785.1 42554.9 42993.2 37158.5 42007.2 38064.8 40019.7 45907.7 True False 33295.622788058696 35504.1023591837 33628.16863076648 36933.69662430601 39565.99063043518 42643.077633550005 38572.58705141141 41169.3334419891 36465.0688299077 37492.84931219529 40261.343932887394 0.8269873664316812 0.8818409643345823 0.8352470470638557 0.9173488268516738 0.9827290091554988 1.0591568355152967 0.9580551289025271 1.0225523894735173 0.9057091807638663 0.9312369049253058 1.0 15.29710771010357 -6.4883787235563535 3.4501777984174677 0.9692469369438257 0.85205513938482 0.6475565039493324 0.04221659754440476 0.14447360340669257 3.5237248549087488 0.006993904446756498 0.016654662011179766 3.248039307853114e-07 6.4883787235563535 -0.11719179755900566 GVGYET(ph)ILK ddPTM_A549_MK2206_60min_R1 4 GVGYETILK 9 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 GVGYET(1)ILK;GVGYET(1)ILK;GVGYET(1)ILK;GVGYET(1)ILK 125.75 7.4342e-05 51892600.0 7624.4 8872.199999999999 8027.599999999999 7922.700000000001 11849.7 10035.5 8846.0 9501.0 13710.2 12787.3 13063.9 True False 8911.212321316878 9323.757083769837 9166.034390116532 9863.761855663519 10106.624827202668 11097.44994897424 10453.20369552133 10847.795845592193 10604.861590690532 9898.640048834453 9819.773084702178 0.9074763993476886 0.9494880384043636 0.9334262931590468 1.0044796117570038 1.0292116467484738 1.130112666886621 1.06450562608274 1.10468905462709 1.0799497604696602 1.008031444662926 1.0 13.261473971792965 -6.453563931691435 2.03503118550204 1.052613521373268 0.9286817770847069 0.6929688575031918 0.03767850183404141 0.17925393734385328 1.4487086662235604 0.006548584727480242 0.018280715008589563 3.5191361415604995e-07 6.453563931691435 -0.12393174428856102 GVGYET(ph)ILK ddPTM_A549_PD325901_60min_R1 2 GVGYETILK 9 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 GVGYET(1)ILK;GVGYET(1)ILK 155.06 1.5566e-05 90735000.0 11495.6 11984.3 12704.7 12345.5 15239.0 10979.3 13344.8 13402.0 14615.5 15142.2 16708.4 True False 12662.624849386566 12994.259019904503 13566.91734156739 13108.053496335211 14168.665211695996 10889.888220975308 13852.643666554755 13134.68659633439 14001.261361770348 14186.118907815988 14653.372723274222 0.8641440498728519 0.8867759842937375 0.9258562924574222 0.8945417375151762 0.9669217783010217 0.7431659882423313 0.9453553068060806 0.8963592781252554 0.9554975244389905 0.9681128826596974 1.0 13.838945143249832 -8.96618829168119 1.124622914718166 0.987296728524173 0.8880612498980206 0.32079316040556705 0.05504251011819782 0.3161212970645869 0.8132375018868672 0.011672236449333373 0.011272827347522427 1.0809651889948026e-09 8.96618829168119 -0.09923547862615245 GVGYET(ph)ILKEQK ddPTM_A549_MK2206_60min_R1 2 GVGYETILKEQK 12 1 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 GVGYET(1)ILKEQK;GVGYET(1)ILKEQK 121.31 5.202999999999999e-06 54742000.0 5651.2 6233.0 7290.799999999999 6438.799999999999 10031.8 7880.3 7553.8 7462.1 11742.2 10423.0 11026.599999999999 True False 6604.984401425151 6550.233076704472 8324.745070937972 8016.306289048713 8556.135509045107 8714.188115480214 8926.227682029046 8519.875526722824 9082.610448440308 8068.437060912115 8288.390901321738 0.7968958607359921 0.7902900761666436 1.00438615529227 0.9671728064575675 1.0323035690414495 1.0513727235150763 1.0769554414483025 1.027928777510261 1.0958231285872286 0.9734624195421879 1.0 13.01687633041091 -5.795992207843957 1.3210281150433725 1.0457924660155618 0.7503271551362976 0.802167756490602 0.04315242195138929 0.17885568402315913 0.4753918242651253 0.006260192254630089 0.054510385680433135 1.599586728305993e-06 5.795992207843957 -0.2954653108792642 GVGYET(ph)ILKEQK ddPTM_A549_PD325901_60min_R1 2 GVGYETILKEQK 12 1 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 GVGYET(1)ILKEQK;GVGYET(1)ILKEQK 144.29 3.4043e-12 59420000.0 19532.8 21279.0 23297.0 23150.0 25753.0 25996.0 26731.0 30753.0 29073.0 31802.0 29957.0 True False 21515.755476712646 23072.25600865701 24878.07451624168 24579.922922535352 23944.198123026905 25784.297194946343 27748.262832764452 30139.60728973823 27851.162914080887 29794.016292636723 26272.478913069215 0.8189465313838222 0.8781910563140557 0.9469252824812854 0.9355768446466655 0.9113794782081218 0.9814185132762624 1.0561722372897637 1.1471931289569068 1.0600888864060085 1.1340390220207095 1.0 14.681264710468906 -7.410040825936413 2.397449522298797 1.0416061122320133 0.8996751096546287 0.6956658235886413 0.054572558762713275 0.15623765361697392 1.7580516151740162 0.008358919391062168 0.014118870020951357 3.890085744494359e-08 7.410040825936413 -0.14193100257738456 GVHDLEKDNFFSLT(ph)PK ddPTM_A549_MK2206_60min_R1 2 GVHDLEKDNFFSLTPK 16 1 Q562F6-2;Q562F6 Q562F6-2 SGOL2 Shugoshin-like 2 1 GVHDLEKDNFFS(0.002)LT(0.998)PK;GVHDLEKDNFFS(0.002)LT(0.998)PK 115.98 9.392200000000001e-08 8432200.0 1228.45 1366.72 1417.59 1178.1 1862.17 1509.7 1323.1799999999998 1557.92 1743.81 1729.25 2049.31 True False 1435.7823272810606 1436.2802102668913 1618.625578141077 1466.7345528869193 1588.2472598016825 1669.4554519422454 1563.5846784806583 1778.759930929902 1348.839819292355 1338.611223983716 1540.4097689213047 0.9320781757223527 0.9324013903603509 1.050775975846053 0.9521716769649042 1.0310550425253904 1.0837736072728927 1.0150446394374546 1.1547316608979348 0.8756370197761734 0.8689968416138381 1.0 10.589098462175809 GVHDLEKDNFFSLT(ph)PK ddPTM_A549_PD325901_60min_R1 2 GVHDLEKDNFFSLTPK 16 1 Q562F6-2;Q562F6 Q562F6-2 SGOL2 Shugoshin-like 2 1 GVHDLEKDNFFS(0.021)LT(0.979)PK;GVHDLEKDNFFS(0.026)LT(0.974)PK 124.26 2.4325e-08 12572100.0 1389.6 1193.51 1464.33 1515.46 1709.45 1604.64 1594.96 1820.6399999999999 1733.78 1719.53 1975.38 True False 1530.6711690305472 1294.09127632371 1563.70823953162 1609.0665223406238 1589.3841292823488 1591.5723438566972 1655.6570755956006 1784.3259069355504 1660.91525598236 1610.9585823431737 1732.4207829655413 0.8835446815700045 0.7469843868465356 0.9026145696860547 0.9287965938542015 0.917435385739056 0.9186984822083807 0.9556899177585845 1.0299610374571693 0.9587250812930223 0.9298887419172784 1.0 10.758573669558105 -6.362206434590193 0.5478603794960014 0.985296364654894 0.790526815945396 0.5642086883405772 0.04572096972372878 0.6886410694720226 0.26821118143397776 0.008259040495829855 0.06862845457353944 4.34303736111118e-07 6.362206434590193 -0.19476954870949803 GVIS(ph)TPVIR ddPTM_A549_MK2206_60min_R1 2 GVISTPVIR 9 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A494C0Y9;A0A0C4DG79 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 GVIS(0.5)T(0.5)PVIR;GVIS(0.5)T(0.5)PVIR 68.22399999999999 0.0045593000000000005 43844000.0 1549.04 1627.55 1782.2 1437.0900000000001 1976.7399999999998 1730.33 1527.0700000000002 1774.07 2523.3 2384.02 2660.1 True False 1810.4800816080863 1710.3853431718849 2034.9427587405564 1789.1771145134223 1685.964164571643 1913.432372099904 1804.5188522857504 2025.549855361513 1951.7765788821023 1845.468226226202 1999.5237549748754 0.9054556501784774 0.855396360716593 1.0177137199183344 0.8948016296690128 0.8431828631077343 0.9569440559729417 0.9024743255968093 1.013016149631573 0.9761207257608334 0.9229538892121794 1.0 10.96544070558551 -8.255150858386086 24.56517372329237 0.990230538098639 0.9113824761230573 0.28812814332770176 0.049448864918154166 288.7698698500219 1128037.1887828512 0.006993017679375296 0.008915463046432329 5.557111895277151e-09 8.255150858386086 -0.0788480619755817 GVIS(ph)TPVIR ddPTM_A549_PD325901_60min_R1 4 GVISTPVIR 9 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A494C0Y9;A0A0C4DG79 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 GVIS(0.5)T(0.5)PVIR;GVIS(0.5)T(0.5)PVIR;GVIS(0.5)T(0.5)PVIR;GVIS(0.5)T(0.5)PVIR 110.87 3.4525e-06 63223800.0 5333.17 5257.08 6210.47 5680.99 6280.17 5995.299999999999 6028.18 6530.9 6852.24 6093.450000000001 7070.200000000001 True False 5874.589492327755 5700.112581323864 6631.949840789947 6031.8918498356015 5839.07252461033 5946.476264535381 6257.585688646672 6400.6360761080605 6564.264182106477 5708.708527085317 6200.610221690493 0.9474211863499696 0.9192825185792478 1.069564059613129 0.9727900374603948 0.9416932069338176 0.9590146859633073 1.0091886870677456 1.0322590595547922 1.0586480922706412 0.9206688249997648 1.0 12.598194487336697 -7.9230836564902 4.042147103393676 1.0285748388442795 0.9698049044654315 0.030248852775032864 0.049848382187292276 0.20808942259134813 6.667377218917961 0.006489468629243314 0.009045090811952018 1.1937581332380195e-08 7.9230836564902 -0.05876993437884792 GVISYQT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 GVISYQTLPR 10 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 GVISYQT(1)LPR;GVISYQT(1)LPR 136.5 5.5464e-07 76270000.0 8409.5 9584.7 11260.7 10939.6 11786.599999999999 10312.7 9606.6 10513.0 11462.5 12173.7 11800.900000000001 True False 9263.2262492533 10392.436306507572 12024.918818090002 11615.314246365779 10958.74987756257 10228.716790364786 9972.184419933228 10303.309967711048 10980.77098691749 11405.050504423365 10349.464112068585 0.8950440475899988 1.0041521178269393 1.1618880637566207 1.122310693634956 1.0588712380560354 0.9883329880275642 0.9635459683660907 0.9955404314795665 1.060998991639841 1.1019943043354152 1.0 13.337268447479204 -7.22450299677802 22.42922971180518 1.018735961702018 1.0563972179105767 0.03579786511343852 0.07250133806065151 435.65491284786015 264545.2942758519 0.010637604749404384 0.01842430736116022 5.963442048443072e-08 7.22450299677802 0.03766125620855876 GVITVK ddPTM_A549_MK2206_60min_R1 2 GVITVK 6 0 P10809;E7EXB4 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 79.454 0.018645 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GVLDLDRPGEPAGEES(ph)PGPLQER ddPTM_A549_MK2206_60min_R1 2 GVLDLDRPGEPAGEESPGPLQER 23 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GVLDLDRPGEPAGEES(1)PGPLQER;GVLDLDRPGEPAGEES(1)PGPLQER 177.8 1.9573999999999999e-41 19838600.0 4528.9 4533.0 4122.2 4402.3 5820.799999999999 5173.6 4370.6 4659.799999999999 6262.9 6798.4 6454.4 True False 5293.26759902576 4763.710337991559 4706.78994505685 5480.863697626755 4964.568030767134 5721.06691804226 5164.681446037247 5320.340920038992 4844.36314979619 5262.636718306141 4851.594347622207 1.091036723138244 0.9818855404360587 0.970153233722781 1.129703620071401 1.0232858881122853 1.1792137817223294 1.0645328269393515 1.0966170167640912 0.9985095213433164 1.084723153098195 1.0 12.244243213286344 -8.779276173926482 24.418003590958175 0.9992961480114507 1.0652686900358417 0.02050928953488529 0.06313314944350827 206.76737357150645 283056.7530233954 0.009939953836497737 0.010593697629300016 1.662355199293851e-09 8.779276173926482 0.06597254202439096 GVLDLDRPGEPAGEES(ph)PGPLQER ddPTM_A549_PD325901_60min_R1 1 GVLDLDRPGEPAGEESPGPLQER 23 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 GVLDLDRPGEPAGEES(1)PGPLQER 84.169 7.2311e-06 17494000.0 1672.9 2121.8 1497.7 1859.4 2005.2 1776.1 1289.7 2004.7 2553.1 2031.0 1568.0 True False 1842.7315764761104 2300.611532457749 1599.3429284017313 1974.25091499621 1864.3616695644605 1761.6360304640777 1338.7802392509188 1964.7146858432732 2445.8020856444086 1902.7623133873713 1375.1459403709493 1.3400261909503428 1.6729944545646935 1.163035050643646 1.4356664678540596 1.3557554982575477 1.2810538712631996 0.973555024196035 1.428731764508781 1.7785763778531367 1.3836802753270652 1.0 10.425369020591482 -11.177376888159882 1.5993879924350904 1.0007967978824674 1.4316492152464722 0.0 0.239273678232995 0.39680784324038526 1.8288658079593243 0.17715345932451598 0.03766411219476922 6.6469607124641515e-12 11.177376888159882 0.4308524173640047 GVLEGDDVLFYDES(ph)PPPRPK ddPTM_A549_MK2206_60min_R1 2 GVLEGDDVLFYDESPPPRPK 20 1 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 GVLEGDDVLFY(0.005)DES(0.995)PPPRPK;GVLEGDDVLFYDES(1)PPPRPK 196.55 2.9195999999999993e-55 10729000.0 1750.1 2006.0 1899.1 1770.1 2656.7 2173.7 1947.4 2088.8 2926.5 2711.1 2892.1 True False 2045.4740941630362 2108.0968316812414 2168.4209365526835 2203.7745794628077 2265.9029493092103 2403.7194912147183 2301.2173724461036 2384.8937966817143 2263.6524226601973 2098.6606270592765 2173.911752100612 0.9409186422523965 0.9697251186227892 0.9974742233475564 1.0137369087467971 1.0423159758530718 1.1057116227887573 1.058560620145909 1.0970517981593477 1.0412807329795566 0.9653844619181889 1.0 11.086077661370044 -5.8843311308766655 1.3938878489395397 1.0362864507229383 0.9418391173923748 0.44645060521799207 0.037816749286738026 0.415010617612266 1.3292293355346618 0.0056836352611539616 0.0396678353624518 1.305175368536971e-06 5.8843311308766655 -0.09444733333056354 GVLEGDDVLFYDES(ph)PPPRPK ddPTM_A549_PD325901_60min_R1 2 GVLEGDDVLFYDESPPPRPK 20 1 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 GVLEGDDVLFYDES(1)PPPRPK;GVLEGDDVLFYDES(1)PPPRPK 248.03 5.876499999999999e-88 35142000.0 11732.8 12053.0 12379.0 13823.9 16499.3 14144.2 13453.0 14780.900000000001 14733.0 13862.6 15304.6 True False 12923.905218769152 13068.748610007176 13219.113380974184 14677.770906645197 15340.446087494955 14029.014324694568 13964.961276764066 14486.083354108265 14113.82324538761 12987.313070193884 13422.231223852834 0.9628730874343678 0.9736643924582763 0.9848670582788288 1.09354180105027 1.1429132632012204 1.0452073199099277 1.040435158943376 1.0792604532370775 1.051525861088262 0.9675971791570651 1.0 13.712336895202453 -6.084526961707314 7.266851194335307 1.0435346780907488 0.9708808819320031 0.3780158651548873 0.044177137119612145 0.23404109420854596 17.514388644563205 0.006385190374487641 0.017089635596774427 8.23138733544661e-07 6.084526961707314 -0.07265379615874579 GVLFHSGGK ddPTM_A549_PD325901_60min_R1 1 GVLFHSGGK 9 0 I3L3N5;P43034 I3L3N5 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha 0 51.346000000000004 0.028201 860020.0 1049.0 1146.6 1326.8 1244.6 1539.6 1715.2 1462.9 972.89 1343.0 1611.7 1350.8 False True 1155.4937077670156 1243.2280059930501 1416.8446266965468 1321.4761153083148 1431.463807331659 1701.2319798727478 1518.5714600295955 953.4849457325599 1286.558380408305 1509.9369869455581 1184.6601634267095 0.9753798966487335 1.0494385177914054 1.1959924630184475 1.1154896198128719 1.2083328633175723 1.4360506349363682 1.2818625179705758 0.8048594653293147 1.0860147239921094 1.2745739525654036 1.0 10.21025754559639 -8.22687084059203 24.98749881593409 1.0240710107715556 1.1843439772099462 0.15785735874237317 0.1523768015561204 692.6197939012393 500653.56361341925 0.02225103412903579 0.02872536093416119 5.931016871081006e-09 8.22687084059203 0.16027296643839062 GVLGKS(ph)PLSALAR ddPTM_A549_MK2206_60min_R1 2 GVLGKSPLSALAR 13 1 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 GVLGKS(0.536)PLS(0.464)ALAR;GVLGKS(0.684)PLS(0.316)ALAR 56.513999999999996 0.0043246000000000005 47719000.0 2226.8900000000003 2460.5 2354.6 2173.73 2902.1000000000004 2400.6 2332.1 2199.66 3176.6000000000004 2881.1000000000004 2903.1000000000004 True False 2602.734589766715 2585.728940354782 2688.5176858548516 2706.293947582449 2475.204934388623 2654.629898610688 2755.8123828086455 2511.468541176227 2457.105171987828 2230.2575089891498 2182.1801485160577 1.1927221460320983 1.184929182915145 1.232032876700449 1.2401789785425383 1.1342807494934963 1.2165035505505397 1.2628711633559095 1.1508988123112083 1.125986401103835 1.022031801776671 1.0 11.091554492025958 -9.598319162947071 0.5702856481841357 1.0043597574108594 1.2107435628677632 0.8047071083263502 0.03615319746607621 0.2269226690244806 0.16154054606974708 0.019651679508624762 0.009992128562730209 2.5216269481251827e-10 9.598319162947071 0.20638380545690382 GVLGKS(ph)PLSALAR ddPTM_A549_PD325901_60min_R1 2 GVLGKSPLSALAR 13 1 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 GVLGKS(0.987)PLS(0.013)ALAR;GVLGKS(0.999)PLS(0.001)ALAR 128.45 1.4291e-08 113571000.0 10068.0 9399.3 8696.0 8933.6 9734.2 9655.8 9988.9 10306.2 9143.9 10195.5 9671.1 True False 11090.095948330138 10191.411997846213 9286.162853296026 9485.408182322328 9050.503373166954 9577.166366170286 10369.033055635819 10100.634755942512 8759.613681768793 9551.754390025088 8481.616010154017 1.3075451582638618 1.2015884691838516 1.0948577301989175 1.1183491649429296 1.0670729920255617 1.1291676438434255 1.2225303578023603 1.190885645359356 1.0327764981675618 1.126171519506415 1.0 13.050123453662623 -2.000000000706278 0.07749233681971919 0.8458353141434949 1.8553670014711607 0.17093554656196286 0.07778443149019237 104.69991533521006 0.5765450937498153 1.1554812039499907 11.363537108287238 0.009999999983737344 2.000000000706278 1.0095316873276658 GVLHTFS(ph)PSPK ddPTM_A549_MK2206_60min_R1 2 GVLHTFSPSPK 11 0 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GVLHT(0.017)FS(0.982)PS(0.002)PK;GVLHT(0.027)FS(0.971)PS(0.001)PK 72.49600000000001 0.00060046 2593700.0 1112.7 1184.4 1102.3 1230.8 1527.6 970.57 993.96 993.69 1719.1 1720.9 1825.8 True False 1300.4965570968577 1244.6809010185748 1258.622715160878 1532.3460552527122 1302.8920635994834 1073.2750731877757 1174.549665973364 1134.5486005479956 1329.7265948385943 1332.1474947830432 1372.4034704834887 0.9476051212831029 0.9069351162308573 0.9170938009341185 1.1165419559255974 0.949350603973978 0.7820404831894427 0.8558340832230465 0.8266873590375734 0.9689035501856756 0.9706675357748377 1.0 10.422488963909135 -8.977002314875563 21.914574033461424 0.9862812604201636 0.9134266081257784 0.12146601548251035 0.08107518330961493 62.31065390518397 59378.02031524017 0.01526564272789622 0.015742610141138008 1.05438127631535e-09 8.977002314875563 -0.07285465229438526 GVLHTFS(ph)PSPK ddPTM_A549_PD325901_60min_R1 2 GVLHTFSPSPK 11 0 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GVLHT(0.055)FS(0.944)PS(0.001)PK;GVLHT(0.12)FS(0.879)PS(0.001)PK 74.46 0.00043238 10463000.0 1282.9 1797.21 1593.15 1687.6399999999999 1841.6 1755.67 1739.47 1811.15 1893.21 1792.52 2075.67 True False 1413.1390635789364 1948.6671940090434 1701.2707393892108 1791.8816898914718 1712.2523691751003 1741.3724056105334 1805.6664827245065 1775.0251924303113 1813.6449675151207 1679.3399812866235 1820.3757487562302 0.7762897657499899 1.0704752550897627 0.9345711952884465 0.9843471553143757 0.940603812342037 0.9566005297534447 0.9919196539276169 0.9750872552785299 0.9963025319109484 0.9225238154452622 1.0 10.83002055646856 -5.247336844111765 24.995617240572557 0.9887092142616428 0.7762896218230029 0.6661141212949302 0.04016132459777305 851.1621809145362 1508592.7428495053 0.004451603931265318 0.12885765092396007 5.658002771938208e-06 5.247336844111765 -0.21241959243863995 GVLLYGPPGTGK ddPTM_A549_PD325901_60min_R1 2 GVLLYGPPGTGK 12 0 Q8NB90-3;Q8NB90-2;Q8NB90;J3QRR3;J3QRW1;J3QLH6;J3KRP2;J3QSA9;J3QQM1;P62195-2;P62195 Q8NB90-3 SPATA5;PSMC5 Spermatogenesis-associated protein 5;26S protease regulatory subunit 8 0 ; 119.68 9.032e-13 2003300.0 6062.7 7028.7 6550.3 6850.0 8340.3 8230.6 6898.7 7468.6 8417.6 7326.7 8395.6 False True 6678.180840876154 7621.033216224791 6994.842748153749 7273.108942521256 7754.506100473002 8163.572722446732 7161.2338036134925 7319.632913996648 8063.837544992508 6864.09091161756 7362.994424093332 0.9069925163902994 1.0350453602527663 0.9499997345190281 0.9877922654296802 1.0531728877993658 1.1087299884044095 0.9725980207428061 0.9941108864683104 1.0951845241938338 0.9322417641872374 1.0 12.846076893637498 -6.655126374500861 4.771987292651311 1.041761483566745 0.9709348930442449 0.10953482072305798 0.05795898632090902 0.21638424708761875 8.203497554871015 0.007448057880727842 0.01577983699280277 2.2124508191964836e-07 6.655126374500861 -0.07082659052250018 GVLNS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 GVLNSPVK 8 0 G5EA31;P53992;P53992-2 G5EA31 SEC24C Protein transport protein Sec24C 1 GVLNS(1)PVK;GVLNS(1)PVK 98.04799999999999 0.0024445 2962900.0 2096.7 2009.7 2412.7 2225.4 2755.4 2456.5 2404.0 2686.0 2540.0 3186.8 2825.0 True False 2309.555440491041 2179.064472042763 2576.4403307437137 2362.8579037498985 2561.8702096139605 2436.4950784499806 2495.4855355192776 2632.4256228737645 2433.2526330879336 2985.584904137308 2477.5429091504693 0.9321959397599172 0.8795264308015347 1.0399175413785893 0.9537101839984296 1.034036665985497 0.9834320404506884 1.0072421051932299 1.0625146443079783 0.9821233061599234 1.205058807704381 1.0 11.274694328666188 -5.756113787893946 24.999999755382248 0.9993619122054348 0.9058611667321058 0.2398953951919639 0.06956432285415155 62.71541695510937 294395.9493561583 0.00399705901609566 0.014615549942518359 1.753421034280493e-06 5.756113787893946 -0.09350074547332898 GVNLPGAAVDLPAVSEK ddPTM_A549_MK2206_60min_R1 2 GVNLPGAAVDLPAVSEK 17 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 151.78 1.7704e-16 4314500.0 2536.1 3381.6 3533.3 3086.4 4329.1 3767.3 3473.7 3812.9 4644.0 3807.1 5079.9 False True 2964.131678308029 3553.7089960185845 4034.3750698339213 3842.568138553762 3692.295124724095 4165.953185468653 4104.826325698893 4353.390251516519 3592.1414149441143 2947.0734658542174 3818.4206318923602 0.7762716484273352 0.930675098059433 1.0565559582770578 1.0063239514420481 0.9669691950345033 1.0910147380499722 1.0750063236654455 1.1401023279509765 0.9407401020572987 0.7718043007728265 1.0 11.898760321432068 -5.354363271735953 2.9872166398541804 1.0036102131219748 0.7603520951085858 0.3437606842481401 0.092324296066268 0.20293671657447493 2.8038794596224874 0.009515663660003656 0.10330484558477067 4.422183178754086e-06 5.354363271735953 -0.24325811801338904 GVNLPGAAVDLPAVSEK ddPTM_A549_PD325901_60min_R1 2 GVNLPGAAVDLPAVSEK 17 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 184.21 8.6391e-39 5256400.0 3888.1000000000004 3390.2 3728.6 3918.0 4495.5 4859.5 3892.9 4120.0 4567.8 4384.2 4623.8 False True 4282.81704973206 3675.904051907936 3981.6452178932336 4160.005961576396 4179.751588633072 4819.925843162089 4041.04643977662 4037.823367922524 4375.831250952384 4107.380863787746 4055.1019126831625 1.0561552192650625 0.9064886977096167 0.9818853640742843 1.0258696454866212 1.0307389749096174 1.188607819716388 0.9965338792441736 0.995739060291778 1.0790927935167485 1.0128921423506203 1.0 11.98552245732289 -6.338215200143302 3.1426598128757766 1.0426662587437532 0.9732076140131599 0.16052647897712868 0.06117601138433373 0.3310311252406394 6.343290615743193 0.008713035446820625 0.022751021352430633 4.589705289452268e-07 6.338215200143302 -0.06945864473059327 GVNLPGAAVDLPAVSEKDIQDLK ddPTM_A549_MK2206_60min_R1 1 GVNLPGAAVDLPAVSEKDIQDLK 23 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 151.42 1.1354000000000001e-27 8105500.0 4779.7 5828.7 6300.1 6856.6 7573.4 5362.8 6307.4 5711.2 9556.3 7659.8 7650.9 False True 5586.396507554465 6125.355933609396 7193.54891389372 8536.46730780447 6459.362892422314 5930.287936461464 7453.372935691977 6520.780089816455 7391.81330827529 5929.4458600378575 5750.970375902136 0.9713832870645147 1.0650995455090535 1.250840891832153 1.4843525091998728 1.1231779108945688 1.0311804006695477 1.29602005375011 1.1338573603404385 1.2853158380451162 1.031033977306434 1.0 12.489589690873196 -10.986184396051485 1.2509696681939881 0.9996839394495782 1.1956350755887837 0.17351411522589455 0.13771310203032489 0.6022874133849634 1.672479843738341 0.10061867072335703 0.02292282132903242 1.0323230011525844e-11 10.986184396051485 0.19595113613920545 GVNLPGAAVDLPAVSEKDIQDLK ddPTM_A549_PD325901_60min_R1 2 GVNLPGAAVDLPAVSEKDIQDLK 23 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 288.0 1.5316999999999997e-140 28680000.0 19631.9 20196.8 20618.9 22580.0 25852.0 28475.0 25773.0 29511.0 26692.0 25603.0 26227.0 False True 21624.916035759066 21898.85521667577 22018.222545518118 23974.71531709927 24036.244704558358 28243.109040856158 26753.805618526738 28922.379954068372 25570.22806393035 23986.422210564695 23001.24526665108 0.9401628383621682 0.9520725927142024 0.9572621956012868 1.0423224933764608 1.0449975393031392 1.2278947819318775 1.1631459648541898 1.257426700979629 1.111688857168267 1.042831461187973 1.0 14.489424349040391 -6.428877563774232 1.9912975650036815 1.0912928396737192 0.9456086007454033 0.46822792709202266 0.07644861165355832 0.32807012027621235 2.526500336036093 0.01376590420824202 0.03947857350558788 3.724967056604667e-07 6.428877563774232 -0.14568423892831583 GVNTFS(ph)PEGR ddPTM_A549_MK2206_60min_R1 2 GVNTFSPEGR 10 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 GVNTFS(1)PEGR;GVNT(0.001)FS(0.999)PEGR 122.33 3.717e-05 27664000.0 2480.5 2698.6 2432.94 2221.87 3274.3999999999996 2494.7 2506.18 2424.95 4086.3 3529.5 3602.4 True False 2899.1477575975173 2835.947213347456 2777.9674758446035 2766.2282497435353 2792.740097571451 2758.687498152163 2961.5204654806266 2768.6940885979157 3160.759574480221 2732.183498655792 2707.8246588178977 1.0706556453559817 1.0473156761137887 1.025903751484901 1.0215684537532552 1.031359282617148 1.0187836532061383 1.0936898945197877 1.0224790883640857 1.167268923483418 1.0089957227321094 1.0 11.402918607015227 -7.761038250286177 24.99999755027352 1.076859697204659 1.0351321150935282 0.0 0.04660108454225419 20.90352014785995 1302711.4659731034 0.009482513296415748 0.01360542489399439 1.733651300491216e-08 7.761038250286177 -0.0417275821111307 GVNTFS(ph)PEGR ddPTM_A549_PD325901_60min_R1 2 GVNTFSPEGR 10 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 GVNTFS(1)PEGR;GVNT(0.001)FS(0.999)PEGR 151.13 2.5540000000000002e-08 34138000.0 7384.1 7402.6 6232.7 7045.299999999999 8484.4 7638.5 7037.6 7102.9 6332.1 7348.3 8580.099999999999 True False 8133.728396112884 8026.4430814269635 6655.688502269798 7480.472179962773 7888.4850135910165 7576.294588536606 7305.419719122485 6961.227087382744 6065.983857470903 6884.327083931277 7524.802093735196 1.0809225671044096 1.0666650074570614 0.8845001395865305 0.9941088266215892 1.0483312272303622 1.0068430364227494 0.9708454293043324 0.9251043417046597 0.8061320127636529 0.9148848033708223 1.0 12.877437923392712 -8.108280291068409 2.689093751544291 0.9069951977466931 1.0102306160168428 0.3576492386471196 0.0638282168200185 0.3092187111036846 4.366356187540473 0.01384676613982327 0.01848695627651592 7.793269751987088e-09 8.108280291068409 0.1032354182701497 GVNTGAVGS(ph)YIYDRDPEGK ddPTM_A549_MK2206_60min_R1 2 GVNTGAVGSYIYDRDPEGK 19 1 H0YFA4;P52943;P52943-2;H0YHD8 H0YFA4 CRIP2 Cysteine-rich protein 2 1 GVNTGAVGS(1)YIYDRDPEGK;GVNT(0.022)GAVGS(0.976)Y(0.003)IYDRDPEGK 124.31 4.3853000000000005e-15 13026800.0 4377.700000000001 5163.4 4801.9 4391.9 6928.2 5418.8 5638.200000000001 5064.1 8676.0 8415.2 8778.5 True False 5116.548735510847 5426.195005335453 5482.8816256291575 5467.91569715988 5909.070957731042 5992.213819291672 6662.587957957081 5781.951683155816 6710.899852725049 6514.200475389773 6598.556175725326 0.7754042853091913 0.8223306524686812 0.8309214136570517 0.8286533525735782 0.8955096842956717 0.9081098439891657 1.0097039080257153 0.8762449737756839 1.0170254937607428 0.9872160366466409 1.0 12.687934668831078 -7.129489425672581 0.5247088897108211 1.0096097942785267 0.7763022555085837 0.7882312453742535 0.038040935934970765 0.30421975416175845 0.1480112268537922 0.008470373025980714 0.03120026218736455 7.421822683870159e-08 7.129489425672581 -0.23330753876994303 GVNTGAVGS(ph)YIYDRDPEGK ddPTM_A549_PD325901_60min_R1 2 GVNTGAVGSYIYDRDPEGK 19 1 H0YFA4;P52943;P52943-2;H0YHD8 H0YFA4 CRIP2 Cysteine-rich protein 2 1 GVNTGAVGS(1)YIYDRDPEGK;GVNTGAVGS(1)YIYDRDPEGK 155.05 5.8390000000000005e-27 19318700.0 7347.6 7977.3 8494.9 8368.5 9844.2 9524.8 8392.3 8770.3 9679.599999999999 10146.8 9726.6 True False 8093.522942982766 8649.57506733678 9071.41499798349 8885.40323875754 9152.77735264635 9447.233186737372 8711.673568942773 8595.369486332753 9272.800073715724 9506.129316336282 8530.2898619975 0.9487981151777112 1.0139837223903372 1.0634357266564534 1.0416296963532357 1.0729737794048517 1.1074926338464606 1.0212634869247923 1.0076292394969113 1.0870439602558069 1.1143969865181433 1.0 13.05837905028083 -5.354785733802485 2.7985086549156404 1.045976171491339 0.9404650219774199 0.39965445016880197 0.037524602551479144 0.2912522716371163 3.432591234112008 0.005288387160951977 0.062493204107512704 4.4178835701611175e-06 5.354785733802485 -0.10551114951391904 GVPAGNS(ph)DTEGGQPGR ddPTM_A549_MK2206_60min_R1 4 GVPAGNSDTEGGQPGR 16 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GVPAGNS(0.994)DT(0.006)EGGQPGR;GVPAGNS(0.964)DT(0.036)EGGQPGR;GVPAGNS(0.999)DT(0.001)EGGQPGR;GVPAGNS(0.989)DT(0.011)EGGQPGR 159.34 2.3341e-20 72843000.0 5331.57 5295.56 4255.87 4822.219999999999 6197.8 4654.92 4575.599999999999 4556.85 7615.300000000001 7092.5 7915.7 True False 6231.408671628376 5565.081384834453 4859.416361037582 6003.664116477677 5286.1118301760125 5147.500544714184 5406.927292474268 5202.797442267845 5890.4467091352135 5490.2993240448195 5950.013227793925 1.0472932467645595 0.9353057164375091 0.816706816438339 1.0090169360352237 0.8884201812330986 0.8651242186603866 0.9087252558056891 0.8744177942267999 0.989988842649885 0.9227373308009347 1.0 12.538677160419052 -8.834364326038093 8.431908579300572 0.99546228104668 0.9153305526343312 0.08295234094022386 0.06509430225501298 0.25980018830961166 27.017935620425405 0.010199701430141933 0.010846237388560094 1.4643189205675037e-09 8.834364326038093 -0.08013172841234883 GVPAGNS(ph)DTEGGQPGR ddPTM_A549_PD325901_60min_R1 4 GVPAGNSDTEGGQPGR 16 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GVPAGNS(0.983)DT(0.017)EGGQPGR;GVPAGNS(0.971)DT(0.029)EGGQPGR;GVPAGNS(0.995)DT(0.005)EGGQPGR;GVPAGNS(0.5)DT(0.5)EGGQPGR 187.78 3.0345999999999997e-34 101871000.0 8517.6 8558.4 9227.6 9042.9 11072.8 9808.9 8854.0 10254.5 9290.099999999999 9955.099999999999 10538.5 True False 9382.300481674283 9279.646403707411 9853.840426066523 9601.459395084019 10295.084727086249 9729.01957053043 9190.9438150947 10049.965953000372 8899.66940419299 9326.533287052005 9242.331309055653 1.015144357839833 1.0040374114932664 1.0661639467968123 1.0388568721483173 1.1139056135110743 1.0526586036791301 0.9944399857305913 1.0873842991490033 0.9629247325805208 1.0091104695536992 1.0 13.174041091258557 -8.773664434133106 24.99956380092946 0.9824922324280803 1.046261192261138 0.3273362679339078 0.03515322102262252 160.1159507149968 327427.24520089844 0.006100912090379772 0.006517691549531618 1.683974713514188e-09 8.773664434133106 0.06376895983305775 GVPHPEDDHS(ph)QVEGPESLR ddPTM_A549_MK2206_60min_R1 2 GVPHPEDDHSQVEGPESLR 19 0 H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 H3BND4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GVPHPEDDHS(1)QVEGPESLR;GVPHPEDDHS(1)QVEGPESLR 128.88 2.3443999999999997e-16 58153000.0 1542.52 2038.51 1611.37 1556.5900000000001 2274.5 1525.96 1476.15 1537.77 2483.5 2300.13 2931.8 True False 1802.8596650067805 2142.261451819804 1839.8864959890977 1937.9546198779817 1939.9240630119316 1687.4360743497318 1744.3473474049065 1755.7536067231135 1920.991215334562 1780.5290354903364 2203.7531464363533 0.8180860310612148 0.9720968318452606 0.8348877454647508 0.8793882486392864 0.8802819254728894 0.7657101146189863 0.7915348187820659 0.7967106522626224 0.871690741969426 0.8079530315678031 1.0 11.105746914035057 -10.161939682866452 0.8524207258620701 0.9915382540250901 0.8463759813305569 0.0 0.07656223121246572 0.3459897795793545 0.4957578176152665 0.026860454009985827 0.011182632138864744 6.887479466895337e-11 10.161939682866452 -0.1451622726945332 GVPHPEDDHS(ph)QVEGPESLR ddPTM_A549_PD325901_60min_R1 2 GVPHPEDDHSQVEGPESLR 19 0 H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 H3BND4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 GVPHPEDDHS(1)QVEGPESLR;GVPHPEDDHS(1)QVEGPESLR 138.0 5.1369e-17 61273000.0 3416.7 3734.9 2980.3 3239.9 3985.8 3274.9 2842.3999999999996 3533.3 4267.5 4653.5 4502.2 True False 3763.560868758399 4049.6531306326897 3182.561079999786 3440.0212646532327 3705.85115826353 3248.230300189635 2950.5690874209595 3462.825559679774 4088.1518156310067 4359.677215828719 3948.4579417972536 0.9531723331578167 1.0256290405842272 0.8060263340556573 0.871231583408334 0.9385565739562381 0.8226579459805794 0.7472712463736979 0.8770070773765339 1.0353793495822745 1.104146803661859 1.0 11.94707360780143 -8.756946969862765 24.94137309036593 1.016706918613025 0.8778676235834252 0.47088641461666436 0.07673471075040499 78.03435276520472 433237.77548092365 0.012857511128266585 0.014337750314944095 1.7500603691560543e-09 8.756946969862765 -0.1388392950295999 GVPLYR ddPTM_A549_PD325901_60min_R1 2 GVPLYR 6 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90;A0A2R8YEM5;E5RGZ4;K7EKN2;K7EPM1;E5RG95;P13929-3;P13929-2;P13929;E5RI09 P06733 ENO1;ENO3 Alpha-enolase;Enolase;Beta-enolase 0 ; 119.58 0.048824 69926000.0 20527.0 20749.0 21271.0 20706.0 25200.0 22015.0 20492.5 22430.0 24393.0 23484.0 26964.0 False True 22610.88592882129 22497.591048621845 22714.577972913965 21984.962593262073 23430.03893528047 21835.717139049986 21272.353301426272 21982.616054005404 23367.84703894248 22001.216232195482 23647.59893887903 0.9561599038981806 0.9513689363038691 0.9605447906835445 0.9296911136765172 0.9907999114768109 0.923379882900072 0.8995565831612775 0.9295918841833779 0.9881699659800721 0.9303784409174528 1.0 14.529406086377339 -8.833905213477683 5.87476264566124 0.9947459465729968 0.9426663776386378 0.05603469219704604 0.02963098923552293 0.12076524657926939 7.2742236469710635 0.004070331005972291 0.0043275658942028335 1.4658677375912948e-09 8.833905213477683 -0.052079568934358944 GVPPPEDLRS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 GVPPPEDLRSPSR 13 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 GVPPPEDLRS(0.942)PS(0.058)R;GVPPPEDLRS(0.93)PS(0.07)R 46.68 0.010084000000000001 12145100.0 2148.0299999999997 2361.82 2376.44 1966.33 3178.2000000000003 2214.08 2089.07 2009.62 2926.08 3275.5 3353.8999999999996 True False 2510.564949708605 2482.0265498511403 2713.454926260471 2448.0809382719085 2710.6909901360837 2448.3724760126424 2468.6269776399195 2294.4897892031354 2263.3275519895956 2535.5622750664515 2521.0340670689943 0.9958472923880157 0.9845271756826337 1.0763261638170518 0.9710622201619423 1.0752298136484877 0.9711778622885371 0.9792120661463316 0.9101383512324989 0.8977774563042642 1.005762797174077 1.0 11.299799898320428 -7.627871665044386 2.5809784423804265 0.9479997234318948 1.0189208335993774 0.29230259184754304 0.04450977378424078 0.26067288652720993 3.530257202496671 0.0076156167711189555 0.011826210109102113 2.355745308869574e-08 7.627871665044386 0.07092111016748259 GVPRT(ph)PVR ddPTM_A549_MK2206_60min_R1 2 GVPRTPVR 8 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 GVPRT(1)PVR;GVPRT(1)PVR 67.334 0.0031909000000000004 57718000.0 2021.94 2185.47 1818.52 1790.81 2440.1000000000004 2020.01 2064.7 1998.12 3074.7 2952.3 3022.6000000000004 True False 2363.1940403131325 2296.7010881028914 2076.4134808803046 2229.5585303925154 2081.1645223809255 2233.7661174258833 2439.8292640903087 2281.359628985862 2378.285359286967 2285.3733795386006 2272.0050004838376 1.0401359327157624 1.0108697329512015 0.9139123727448308 0.9813176159021292 0.9160034955634906 0.9831695427387654 1.0738661506337934 1.0041173450322654 1.0467782239830001 1.0058839567042837 1.0 11.149750294753492 -7.542596559383044 24.646801111026484 1.0247198245061542 0.9695995061259594 0.30197796420252987 0.03940671208030506 191.48967398730636 239356.70104200928 0.006089607369068695 0.009033032590469676 2.866839902438854e-08 7.542596559383044 -0.05512031838019482 GVPRT(ph)PVR ddPTM_A549_PD325901_60min_R1 2 GVPRTPVR 8 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 GVPRT(1)PVR;GVPRT(1)PVR 64.374 0.0037426 70281000.0 3352.7 3258.3999999999996 3434.3 4034.7 3958.7 3646.1 3386.8999999999996 3997.3 3666.7 3997.8999999999996 4113.6 True False 3693.063635872707 3532.9968033557957 3667.372250123567 4283.914255531462 3680.654568773603 3616.4073704606044 3515.790332882794 3917.5707156788135 3512.6013502927244 3745.471911714117 3607.6532782588924 1.0236747688943753 0.9793060837212364 1.016553412220782 1.1874517657636277 1.0202351182012541 1.0024265336845055 0.9745366479839678 1.0859055495403627 0.9736526986839374 1.038201740251973 1.0 11.81684497642257 -6.995594804824359 24.999860580082647 0.9959491676295094 1.0515315133775078 0.05497391489220005 0.05766810844684896 178.18884630045932 1011223.4904938787 0.008177924113033464 0.01541421718413904 1.010194954761996e-07 6.995594804824359 0.055582345747998474 GVQKPAGPS(ph)TSPDGNSR ddPTM_A549_MK2206_60min_R1 2 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.333)T(0.333)S(0.333)PDGNS(0.001)R;GVQKPAGPS(0.333)T(0.333)S(0.333)PDGNSR 73.707 0.00045643 13080500.0 497.88 819.81 604.23 650.0799999999999 578.25 595.13 458.6 540.6400000000001 929.68 979.6600000000001 657.79 True False 581.9099720026815 861.5348273083736 689.918899738417 809.3496291832002 493.1901910031433 658.1062615846784 541.9216837854489 617.2773756405602 719.1089643938943 758.3541255965805 494.4425889195609 1.176900989201297 1.742436526738059 1.3953468313601471 1.6368930333282243 0.9974670508882452 1.3310064228543697 1.0960254960432063 1.2484308380259348 1.4543831387285362 1.5337556727338357 1.0 8.949659205219229 -13.296593525098336 0.31949280529353413 3.9632783129921316e-16 1.3817234903788649 0.0 0.26331042048917525 16.34517762527461 0.5685549010632538 10.665429860663181 0.07262126501810286 5.0513385290515485e-14 13.296593525098336 1.3817234903788644 GVQKPAGPS(ph)TSPDGNSR ddPTM_A549_PD325901_60min_R1 2 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.33)T(0.33)S(0.33)PDGNS(0.01)R;GVQKPAGPS(0.392)T(0.304)S(0.304)PDGNSR 67.358 0.0016515 2218100.0 536.23 267.99 326.56 373.88 474.74 507.1 590.08 444.96 659.52 438.14 584.78 True False 590.6676748483384 290.5744578109869 348.722325364806 396.97371845691197 441.3959001640893 502.9703457284693 612.5358173041658 436.0849237356326 631.8026679425803 410.4757656265599 512.8557672258444 1.15172278951526 0.5665812424861116 0.6799617897467076 0.7740455383864254 0.8606628381147042 0.980724753177979 1.1943627359745097 0.8503071459925603 1.231930512081686 0.8003727204763991 1.0 9.002409336921946 -7.27708236135309 1.9971249143139231 1.095023314010554 0.7705632797145214 0.17204734509241093 0.18663825657698416 0.23394442383782804 1.8189621470000172 0.02544236742521105 0.046479864549716046 5.283450447933703e-08 7.27708236135309 -0.32446003429603265 GVQKPAGPST(ph)SPDGNSR ddPTM_A549_MK2206_60min_R1 2 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.174)T(0.784)S(0.041)PDGNSR;GVQKPAGPS(0.325)T(0.336)S(0.336)PDGNS(0.003)R 101.17 6.7118e-09 166521000.0 4983.6 5335.8 5323.9 5021.6 6680.700000000001 5173.700000000001 4588.299999999999 4091.5 7528.3 7656.7 7677.1 True False 5824.709842678083 5607.369428955516 6078.909074884328 6251.892225428192 5697.977879869776 5721.17749997589 5421.934718082805 4671.482654693241 5823.152070224761 5927.046152190902 5770.66419281892 1.00936558566801 0.9717026050369366 1.0534158411867027 1.0833921393672703 0.9874041686501884 0.9914244372589534 0.9395685725102358 0.8095225261082575 1.0090956388471117 1.0270994731536425 1.0 12.494521664631426 -6.964047903628728 24.990129732703725 0.9822637355518284 1.0280964865455402 0.16646526441902665 0.06180679999401197 337.5385193470438 234620.19804809784 0.009553547437640392 0.0180544685133208 1.0863057951096354e-07 6.964047903628728 0.04583275099371176 GVQKPAGPST(ph)SPDGNSR ddPTM_A549_PD325901_60min_R1 1 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.042)T(0.572)S(0.383)PDGNS(0.002)R 88.945 2.7338999999999998e-06 96839000.0 4170.2 4021.7 3987.8 3918.3 4487.2 4894.6 4058.4 4560.2 4107.8 4007.9 4698.7 True False 4593.555634061019 4360.622773157376 4258.436088589454 4160.324491895045 4172.034551999622 4854.740000399455 4212.844632841691 4469.243233592306 3935.1634512592946 3754.840510007508 4120.789687513381 1.114727026225141 1.058200758551383 1.0334029182545186 1.0095939874100976 1.0124356903341902 1.1781091413400824 1.0223391515483673 1.0845598956760139 0.954953722385648 0.9111944056221178 1.0 12.008705119422435 -8.761012456446828 24.999797299895537 0.9787281446239896 1.0618062478951715 0.4461949107723703 0.05219212937548401 8.678269206623842 508181.0444319557 0.008260263369567858 0.009087685366693443 1.7337542694511373e-09 8.761012456446828 0.08307810327118192 GVQKPAGPSTS(ph)PDGNSR ddPTM_A549_PD325901_60min_R1 5 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.021)T(0.28)S(0.698)PDGNS(0.002)R;GVQKPAGPST(0.004)S(0.996)PDGNSR;GVQKPAGPS(0.001)T(0.023)S(0.972)PDGNS(0.004)R;GVQKPAGPS(0.078)T(0.232)S(0.689)PDGNS(0.001)R;GVQKPAGPS(0.003)T(0.063)S(0.93)PDGNS(0.005)R 172.91 5.26e-30 144904700.0 9579.6 10900.119999999999 11074.5 9865.2 12381.1 12203.8 11190.8 12103.0 11839.8 12631.800000000001 13150.9 True False 10552.11393987121 11818.711366374459 11826.082166378439 10474.550998505218 11511.494248476238 12104.416298956996 11616.672017840732 11861.596170380171 11342.21438001358 11834.225992243522 11533.422670423679 0.914916087045961 1.0247358224963328 1.025374904251559 0.9081910286151367 0.9980987064660628 1.0495077345944819 1.0072180955988492 1.0284541293017953 0.9834213749141065 1.0260810108512908 1.0 13.493533091749082 -6.961693806269789 24.997722675958684 1.0008081396639705 0.9735033945396534 0.18766707009096373 0.03946494700383921 304.8609369021126 198943.83482822115 0.005510160566965486 0.010413212779559101 1.0922101137277468e-07 6.961693806269789 -0.02730474512431713 GVQVETIS(ph)PGDGR ddPTM_A549_PD325901_60min_R1 2 GVQVETISPGDGR 13 0 Q1JUQ3;A0A087WTS4;A0A087WV48;A0A087WZM5;P62942 Q1JUQ3 FKBP12-Exin;FKBP1A Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP1A 1 GVQVET(0.002)IS(0.998)PGDGR;GVQVET(0.004)IS(0.996)PGDGR 108.23 7.5246e-05 16135400.0 14605.900000000001 18225.4 16144.4 15975.2 16454.8 14923.699999999999 14713.6 16458.2 17048.300000000003 18717.3 18835.3 True False 16088.680215704728 19761.318420046868 17240.056068163798 16961.951821688406 15299.071613978294 14802.166335136963 15273.534099590863 16129.928289791873 16331.819238060234 17535.486483685603 16518.677506804186 0.9739690244014789 1.1963014842990312 1.0436704791326346 1.0268347338763428 0.9261680668852863 0.8960866467088435 0.9246220887416419 0.9764660810859596 0.9886880612163423 1.0615551079354013 1.0 14.011810568077447 -6.317863827224402 2.704886812975592 0.9765476436085543 1.0878482720081932 0.3211299742882098 0.06488729702540975 0.22042417459308952 3.149394799379081 0.008448045972041913 0.02335897461929964 4.809901389793575e-07 6.317863827224402 0.11130062839963895 GVQVETISPGDGR ddPTM_A549_PD325901_60min_R1 1 GVQVETISPGDGR 13 0 Q1JUQ3;A0A087WTS4;A0A087WV48;A0A087WZM5;P62942 Q1JUQ3 FKBP12-Exin;FKBP1A Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP1A 0 139.32 1.4480999999999999e-08 8343100.0 5875.3 7099.9 5969.9 7200.6 8689.1 7228.8 5711.5 6952.1 5909.5 7211.7 6870.3 False True 6471.756130832739 7698.233490101213 6375.053313925018 7645.364708250892 8078.807591767678 7169.931049501003 5928.854257952724 6813.434911683059 5661.1442658398155 6756.352031243575 6025.296654419984 1.074097509553367 1.277652194013387 1.0580480397174241 1.2688777244921996 1.3408149100577973 1.1899714587897259 0.9839937513455851 1.130804888533566 0.9395627452943687 1.1213310179984763 1.0 12.55681655858968 -7.744348018612637 5.65928387473657 0.9857602315011279 1.209092619709931 0.3681147478729583 0.09934435743154522 0.09164180593005744 9.027065548909906 0.013840846660858925 0.020170205080520053 1.8015734849195755e-08 7.744348018612637 0.22333238820880308 GVQVPVS(ph)PGTIPQPVAR ddPTM_A549_PD325901_60min_R1 2 GVQVPVSPGTIPQPVAR 17 0 Q6IE81-2;Q6IE81;Q6IE81-3;D6RCS1;D6RC05;D6RBB3;D6RFK0;D6RGE7 Q6IE81-2 JADE1 Protein Jade-1 1 GVQVPVS(0.943)PGT(0.057)IPQPVAR;GVQVPVS(0.874)PGT(0.126)IPQPVAR 140.22 1.5749000000000002e-13 20681400.0 6983.9 6621.4 7371.8 7272.6 8289.5 8024.1 7977.5 8338.1 8075.700000000001 7946.1 9129.2 True False 7692.900386724552 7179.408615805317 7872.094678234549 7721.81198472702 7707.274117222518 7958.754389981873 8281.088127955496 8171.790054387089 7736.306413003235 7444.3818899100925 8006.366274766886 0.9608479206065974 0.8967124872156006 0.9832293962174187 0.9644589967190639 0.9626432082570346 0.9940532467350304 1.0343129259592372 1.0206615303301272 0.9662693595951537 0.9298078097391121 1.0 12.96693190222397 -6.246345692019587 1.1058805463970514 0.9904768404863434 0.9310079033687549 0.2649529090307692 0.03203447738247633 0.49352511804455845 1.0284777147955553 0.004293920862774198 0.022454772138001296 5.670930279989475e-07 6.246345692019587 -0.059468937117588494 GVQYLNEIK ddPTM_A549_MK2206_60min_R1 1 GVQYLNEIK 9 0 P13639 P13639 EEF2 Elongation factor 2 0 87.639 0.0031613 1267600.0 1352.7 1741.8 1465.4 1692.4 2442.4 1386.0 1430.4 1507.1 2368.2 2063.3 2002.5 False True 1581.002689660214 1830.4501801706797 1673.2157550546576 2107.0380759747236 2083.1261954277156 1532.6656000476605 1690.2851646024976 1720.7360403001783 1831.8064812382966 1597.1990969759163 1505.2239838115815 1.050343807076966 1.2160649842527416 1.1116058294644504 1.3998169698566767 1.3839310413807981 1.018230918807572 1.122945942119722 1.1431760713398078 1.2169660468734569 1.061103938120513 1.0 10.555762466856818 -7.280084619173844 24.996573611763303 1.1046785368074639 1.234043110409976 0.2786479014087909 0.11027267759356615 1020.4262298948844 1368022.2345931698 0.018748035863277987 0.030001994012106268 5.2470521523060034e-08 7.280084619173844 0.1293645736025122 GVREEDALLENGS(ph)QSNESDDVSTDR ddPTM_A549_MK2206_60min_R1 1 GVREEDALLENGSQSNESDDVSTDR 25 1 Q8IVJ1 Q8IVJ1 SLC41A1 Solute carrier family 41 member 1 1 GVREEDALLENGS(0.772)QS(0.174)NES(0.043)DDVS(0.006)T(0.006)DR 42.106 0.019534 1213000.0 610.56 627.85 755.54 629.05 866.5 605.75 655.08 852.18 996.91 971.05 1051.8 True False 713.6076012411773 659.8048832358262 862.6869329698347 783.167278239128 739.0389978456094 669.8500629356924 774.0995565071347 972.9791246917957 771.1114767381431 751.6891305764857 790.6090317967644 0.9026049191715012 0.834552676101273 1.0911675661094633 0.9905873152742463 0.9347717621768686 0.8472582983442131 0.9791180284746941 1.2306703889792039 0.9753385627099269 0.9507722532187268 1.0 9.626820626154077 -7.994971768152805 24.968419071177102 1.0109022306886157 0.9366784675431458 0.1912257434098903 0.09518432945131658 237.38565627730068 1178761.6464309192 0.015009686761345556 0.020700502336932703 1.0116452153644877e-08 7.994971768152805 -0.07422376314546997 GVS(ph)MPNMLEPK ddPTM_A549_MK2206_60min_R1 4 GVSMPNMLEPK 11 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK 122.39 8.566e-06 15355200.0 8164.200000000001 8031.4 8673.9 7650.400000000001 11331.400000000001 8824.1 8635.4 8590.900000000001 12857.6 12901.0 13035.199999999999 True False 9542.117364473957 8440.163955117006 9903.9894484568 9524.748343439513 9664.566070614808 9757.860405036474 10204.340401571882 9808.686383527842 9945.3741293681 9986.655139866374 9798.200086781882 0.9738643097671184 0.8613994285035151 1.0107968158169816 0.9720916351043631 0.986361370967781 0.9958829497879077 1.0414505022547864 1.001070226843 1.0150205181852492 1.0192336399966688 1.0 13.25830103752602 -5.7842721199296445 24.999998573625895 1.0048364519793072 0.9176318620025896 0.5649590511903021 0.0294534814096348 92.77550659455407 101581.78776204448 0.0035889359686890896 0.011168990175980087 1.6433417166664245e-06 5.7842721199296445 -0.08720458997671754 GVS(ph)MPNMLEPK ddPTM_A549_PD325901_60min_R1 4 GVSMPNMLEPK 11 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK 80.979 2.6029e-05 35023400.0 10803.099999999999 10121.699999999999 11673.3 10502.8 12731.0 11332.8 10630.7 12057.8 12026.5 13103.1 12495.5 True False 11899.822759178107 10974.691181109238 12465.520335255349 11151.534102410553 11836.818479565705 11240.509434177859 11035.257105842253 11817.297719838889 11521.068028280319 12275.768029810964 10958.632715500775 1.085885718420514 1.0014653712762678 1.137506900621198 1.0176026874809776 1.0801364355265555 1.0257218875743845 1.0069921487772004 1.0783551220877718 1.0513234933025897 1.1201915739403445 1.0 13.419780187189286 -14.999999566712658 0.19346800199652528 0.755543430864727 1.0632764954499885 0.0 0.052868896576320996 51.852652640551334 0.5996997004649336 4.788591577563226 0.0331289675100608 1.0000009976814724e-15 14.999999566712658 0.3077330645852615 GVS(ph)PEGR ddPTM_A549_PD325901_60min_R1 1 GVSPEGR 7 0 C9J069 C9J069 C9orf172 Uncharacterized protein C9orf172 1 GVS(1)PEGR 51.854 0.048745 8099500.0 543.35 583.86 505.54 506.22 579.36 363.05 492.46 593.45 504.3 447.1 688.57 True False 598.5104920068711 633.0639312568484 539.848984458978 537.4880596909653 538.6677522834958 360.09344116884404 511.2008347844522 581.6131741974816 483.1060247504901 418.8700296974367 603.880255204863 0.9911079006943682 1.0483269254135241 0.8939669409721588 0.8900573500430569 0.8920108707656881 0.5962994121188552 0.8465268244463965 0.9631266615931541 0.8000030148139204 0.6936309410469752 1.0 9.238118692389651 -5.80771215633921 6.8251765874710015 0.8803147977368228 1.0195638823135287 0.208257778178504 0.11532658853692081 0.22992302700524753 25.75253780013045 0.01591258042346926 0.05117043497760322 1.5569972433735571e-06 5.80771215633921 0.13924908457670593 GVS(ph)PSQAQGLGSNLVTEVR ddPTM_A549_MK2206_60min_R1 1 GVSPSQAQGLGSNLVTEVR 19 0 U3KQS6;A0A0A0MQU7;F5H0K0;A0A0A0MTK8;P20823-6;P20823-3;P20823-2;P20823;P20823-7 U3KQS6 HNF1A Hepatocyte nuclear factor 1-alpha 1 GVS(0.852)PS(0.148)QAQGLGSNLVTEVR 65.107 0.0020479 9836400.0 811.24 1010.5 888.82 615.16 1373.3 1042.8 1229.5 965.5 1378.8 1203.3 1514.0 True False 948.1574790862368 1061.93013380553 1014.8680410861753 765.8742276155821 1171.2893891995095 1153.148403845383 1452.8842350942193 1102.3625817197417 1066.5040014911601 931.4736942718547 1138.0320157257108 0.833155364685946 0.9331285228635229 0.8917745960240009 0.672981266811894 1.029223583356388 1.0132829199097995 1.2766637625460218 0.9686569151719135 0.9371476256852598 0.8184951577815356 1.0 10.152325429546478 -6.814588686896497 24.999989858932626 0.9998220543024355 0.8441424075726611 0.3282522936858896 0.11873202112450074 87.11510489355028 40976.247088200515 0.015915577137020222 0.030077636973856483 1.5325382161168965e-07 6.814588686896497 -0.1556796467297744 GVS(ph)PSQAQGLGSNLVTEVR ddPTM_A549_PD325901_60min_R1 4 GVSPSQAQGLGSNLVTEVR 19 0 U3KQS6;A0A0A0MQU7;F5H0K0;A0A0A0MTK8;P20823-6;P20823-3;P20823-2;P20823;P20823-7 U3KQS6 HNF1A Hepatocyte nuclear factor 1-alpha 1 GVS(0.559)PS(0.441)QAQGLGSNLVTEVR;GVS(0.836)PS(0.164)QAQGLGSNLVTEVR;GVS(0.984)PS(0.016)QAQGLGSNLVTEVR;GVS(0.797)PS(0.203)QAQGLGSNLVTEVR 211.33 3.7235e-66 37066000.0 8939.5 7490.6 9191.7 8950.4 9110.1 10141.0 8371.8 10141.6 9928.0 9895.7 10015.0 True False 9847.031459087919 8121.85915026299 9815.504036182283 9503.245880166762 8470.238004138839 10058.41505823784 8690.393430224738 9939.317832068713 9510.760685549998 9270.883813189273 8783.218490315736 1.1211188096874887 0.9247019369059357 1.1175293028409496 1.0819776247903794 0.9643660821460851 1.1451855682889045 0.989431543779385 1.1316259345054067 1.082833211542721 1.0555223945995686 1.0 13.100533977176346 -4.9651115748376125 16.920641526383953 1.0459300614753544 1.413735509802628 0.08121156674261354 0.06857362763446989 8212531.105923014 105900795.58862221 0.008714110612958311 91147379.43502964 1.0836484775212346e-05 4.9651115748376125 0.3678054483272737 GVS(ph)PTPSK ddPTM_A549_MK2206_60min_R1 1 GVSPTPSK 8 0 F8W130;Q12815;F8W052;F8VXF3;B7Z5Q9;F8W1E3;Q12815-3;Q12815-2;F8VXV6;F8VR46;F8VVX4;F8VVT5;F8VVS4 F8W130 TROAP Tastin 1 GVS(0.496)PT(0.496)PS(0.008)K 66.27 0.0085585 4427400.0 1774.2 2345.3 1922.4 1860.8 2110.4 1562.6 1881.0 2133.9 2649.6 2504.6 3094.0 True False 2073.6415849746063 2464.6657524137654 2195.025226912156 2316.6960835344867 1799.9629556299749 1727.9532948300678 2222.753351941625 2436.386859794671 2049.4698305417583 1938.8091204797547 2325.674409944086 0.8916302196507639 1.0597638869290482 0.9438230981631384 0.9961394740505334 0.7739531156784967 0.7429901999358591 0.9557457150655343 1.0476044494350552 0.8812367809434819 0.8336545787277109 1.0 11.18343342100978 -11.011329552164334 1.1901503457239297 1.0017015673786065 0.9189923990117025 0.0 0.10660465985310844 1.1184345248658354 2.72087445887054 0.07848110144559356 0.01629223577001385 9.742500748608129e-12 11.011329552164334 -0.082709168366904 GVS(ph)PTPSKIPVR ddPTM_A549_PD325901_60min_R1 2 GVSPTPSKIPVR 12 1 F8W130;Q12815;F8W052;F8VXF3;B7Z5Q9;F8W1E3;Q12815-3;Q12815-2;F8VXV6;F8VR46;F8VVX4;F8VVT5;F8VVS4 F8W130 TROAP Tastin 1 GVS(0.813)PT(0.187)PSKIPVR;GVS(0.827)PT(0.173)PSKIPVR 93.478 7.3707e-05 26052000.0 5709.9 6068.9 6817.0 6370.9 7310.7 8309.4 6558.0 7889.099999999999 6923.9 7427.1 8778.4 True False 6289.564844593786 6580.347501806403 7279.642613951135 6764.416023636304 6797.221652545833 8241.731001372787 6807.5682786753005 7731.745711620778 6632.91256151084 6958.151638483185 7698.712450862468 0.816963211022277 0.8547335082074954 0.9455662437600997 0.8786425089663535 0.8829036927836365 1.070533683908338 0.8842476351890068 1.0042907513391552 0.861561281038334 0.9038071863177173 1.0 12.910401471238911 -4.453515169595835 0.631730442982529 0.9413971586985926 0.527360367289816 0.28802000611048406 0.06216812781746817 8.198485880089901 1.0762893827475617 0.011273874326279014 3.11935762639544 3.519531288388355e-05 4.453515169595835 -0.4140367914087767 GVS(ph)QEK ddPTM_A549_MK2206_60min_R1 2 GVSQEK 6 0 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 GVS(1)QEK;GVS(1)QEK 89.355 0.03803 24507000.0 18171.5 12552.2 8875.7 6313.5 2328.2 2188.5 2136.27 2438.0 2917.9 18535.199999999997 19484.0 True False 21238.404949479234 13191.053365218968 10134.407722900667 7860.307783423782 1985.7248641478907 2420.085617391273 2524.402606673225 2783.593966061865 2257.0003089288193 14348.08544674453 14645.58506895624 1.4501574945269735 0.9006846297441272 0.6919769797645186 0.5367015210669197 0.13558521935439546 0.16524335531811893 0.1723661154393973 0.19006369175118562 0.1541078965641945 0.9796867369373785 1.0 13.838178207401194 -5.360641575375233 1.33944285838313 0.4672135809708903 1.7439850315423502 0.5071871450860232 0.30524266368023206 0.9036663926984024 1.5922580565230415 0.055373139333613194 1.481565571587341 4.358714513875706e-06 5.360641575375233 1.2767714505714598 GVS(ph)QEK ddPTM_A549_PD325901_60min_R1 1 GVSQEK 6 0 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 GVS(1)QEK 85.676 0.039779 26490000.0 7055.3 5781.9 5104.0 4863.0 5333.3 3908.9 3291.0 3470.7 5226.8 6646.8 7411.5 True False 7771.548862162648 6269.161004579815 5450.388132845323 5163.376465325679 4958.707406886162 3877.0672143916627 3416.240805904301 3401.47416578852 5007.135772686619 6227.119913650016 6499.932485369449 1.1956353207753236 0.9644963264912255 0.8385299609055137 0.7943738611051433 0.7628859865925691 0.5964780746751548 0.5255809677398712 0.5233091533557959 0.7703365817963599 0.9580283991666836 1.0 12.666209017644942 -5.34362093215809 1.6610389787587323 0.8015200749496331 1.2966364119191272 0.4094667914727075 0.15440489712197913 0.8526409981784553 2.5425494276470606 0.027314082172859057 0.6378374071823946 4.532930577670135e-06 5.34362093215809 0.4951163369694941 GVS(ph)QEKEAQISSAIVSSVQSK ddPTM_A549_MK2206_60min_R1 2 GVSQEKEAQISSAIVSSVQSK 21 1 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 GVS(1)QEKEAQISSAIVSSVQSK;GVS(0.998)QEKEAQIS(0.002)SAIVSSVQSK 123.79 1.1790999999999998e-15 72386000.0 4770.700000000001 5761.4 6344.6 5602.0 8083.8 5917.299999999999 5398.7 6028.7 9342.2 8759.8 8734.2 True False 5575.877527583337 6054.630651070932 7244.359683035206 6974.490251483332 6894.6837285451065 6543.464758414151 6379.573908095293 6883.286687119424 7226.206616427846 6780.9550960546785 6565.257088343129 0.8493007132170841 0.9222229334813355 1.1034388426156 1.0623331512587393 1.0501772643126022 0.9966806585582656 0.9717173024987058 1.0484413016119305 1.100673822698925 1.0328544647694802 1.0 12.680635791258632 -5.588464336303249 4.830067671456348 1.0438106763034516 0.8645000418800226 0.7075120578487751 0.039442296515090354 0.08409986764249848 3.729632461964482 0.00659495299034387 0.028413440798782486 2.5795007809720697e-06 5.588464336303249 -0.17931063442342898 GVS(ph)QEKEAQISSAIVSSVQSK ddPTM_A549_PD325901_60min_R1 2 GVSQEKEAQISSAIVSSVQSK 21 1 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 GVS(1)QEKEAQISSAIVSSVQSK;GVS(1)QEKEAQISSAIVSSVQSK 201.32 3.3447e-56 155065000.0 7261.4 8490.1 9087.2 8489.1 10119.2 9632.2 9735.8 10680.7 9806.0 10019.6 8986.0 True False 7998.57198243985 9205.590523008543 9703.912037772727 9013.452426855072 9408.462301344847 9553.75855674573 10106.301196634184 10467.66505965294 9393.887921283564 9386.960746044366 7880.778966947294 1.0149468746663992 1.1681066759539418 1.2313391960962006 1.1437260789394441 1.193849280737957 1.212286069285164 1.2823987627391826 1.328252588171205 1.1919999229368552 1.191120926676682 1.0 12.944122522999713 -10.410444058702543 0.9301416308424878 1.0083947623037548 1.1993105482640927 0.02466337417612452 0.0930538616006759 0.3650119644656391 0.601594771420501 0.041758634038271014 0.014783066416022736 3.886475562656621e-11 10.410444058702543 0.19091578596033787 GVS(ph)RS(ph)PPK ddPTM_A549_MK2206_60min_R1 1 GVSRSPPK 8 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 2 GVS(1)RS(1)PPK 40.589 0.02833 20649000.0 3087.6 3125.0 2630.1 2430.7 3083.3 2679.8 2686.9 2807.8 3483.0 3812.5 4058.1 True False 3608.7113954275696 3284.0491520458013 3003.0877285173037 3026.221609118268 2629.750654422813 2963.374657292728 3175.0749502030585 3205.814248526868 2694.1060612080855 2951.2536021037554 3050.3617721377173 1.1830437387426858 1.076609726112688 0.9845021518259838 0.9920861311468209 0.8621110710353098 0.9714830169852188 1.0408847170865052 1.0509619802506929 0.8832087019370279 0.9675093718590283 1.0 11.574764640753216 -5.450566852341847 1.484167499372204 0.9566362627812394 1.2283122486692548 0.5707033720277275 0.05533372941298744 0.4667547782121221 1.2087922104322457 0.009189986854291357 0.16671965175872858 3.5435057976182356e-06 5.450566852341847 0.27167598588801545 GVS(ph)RS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 GVSRSPPK 8 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 2 GVS(1)RS(1)PPK;GVS(1)RS(1)PPK 42.243 0.023596000000000002 89421000.0 8651.400000000001 6875.6 7837.1 6861.400000000001 9508.099999999999 6641.2 6631.5 7776.8 8116.1 7439.9 8745.6 True False 9529.683759175943 7455.030941920301 8368.972734310757 7285.213094629981 8840.283857164295 6587.116269082846 6883.865361396038 7621.685623218421 7775.0085414980185 6970.143444298721 7669.946642926132 1.2424706719394216 0.9719795050720407 1.0911383251967373 0.9498388233703055 1.1525873997203808 0.8588216549274221 0.8975115058648961 0.9937077763438913 1.0136978656388416 0.9087603563353562 1.0 12.905000826112119 -5.257532309456119 24.78840887628357 0.9990144056445942 1.2424707784511966 0.4430053064725761 0.08178018399038202 223.97754727027592 1420958.7116099624 0.009744978035874641 0.10155908467277103 5.526722902096022e-06 5.257532309456119 0.24345637280660237 GVS(ph)SESSGDR ddPTM_A549_PD325901_60min_R1 1 GVSSESSGDR 10 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.978)S(0.022)ESSGDR 90.05 0.00067004 5687000.0 368.9 510.99 578.01 377.58 702.03 632.49 304.69 451.72 464.97 531.41 406.98 True False 406.3504564301733 554.0529206195606 617.2372344564903 400.90225905360234 652.7218346720219 627.339211141391 316.2851446827656 442.7100902325153 445.42892787673054 497.856681909002 356.92404005878143 1.1384788101223215 1.5522992526037591 1.729323792129099 1.1232145052139895 1.8287415848047834 1.7576266676743748 0.8861413331270063 1.2403481989041867 1.2479656114039652 1.3948533190059447 1.0 8.479473264895391 -7.761434261958917 24.999999999999947 1.1155272251856352 1.5283014943738378 0.34792370514733784 0.24808456046191718 0.10538139939912931 494152.8836916453 0.03587929419520223 0.05133717402854232 1.732071190078999e-08 7.761434261958917 0.4127742691882026 GVS(ph)SESSGDREK ddPTM_A549_MK2206_60min_R1 1 GVSSESSGDREK 12 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.428)S(0.158)ES(0.38)S(0.034)GDREK 97.79700000000001 6.0275e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GVS(ph)SESSGDREK ddPTM_A549_PD325901_60min_R1 1 GVSSESSGDREK 12 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.792)S(0.194)ES(0.01)S(0.004)GDREK 76.358 0.00021384 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GVSAVAGPHDIGAS(ph)PGDKK ddPTM_A549_MK2206_60min_R1 2 GVSAVAGPHDIGASPGDKK 19 1 Q8IYB7;Q8IYB7-4;Q8IYB7-5;Q8IYB7-3;Q8IYB7-2;C9JGP4 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 GVSAVAGPHDIGAS(1)PGDKK;GVSAVAGPHDIGAS(1)PGDKK 110.26 1.4522e-10 30343000.0 5272.200000000001 5935.4 5903.4 5953.200000000001 7533.9 6734.4 5711.299999999999 6730.0 9950.900000000001 9091.9 10259.9 True False 6162.018467085518 6237.486507856843 6740.590888760523 7411.734267249307 6425.673290096981 7447.029738067074 6748.969281735351 7683.998109760604 7697.037038322005 7038.033475401217 7712.083671165268 0.7990082485910658 0.808793936089957 0.8740297922289066 0.9610547010739862 0.8331954843957347 0.965631346287229 0.8751161903194971 0.9963582395365246 0.9980489536311022 0.9125981739170882 1.0 12.912904988631462 -4.878554263274805 0.2514324390111118 1.014785289830677 0.5629716764836616 0.5103353107781752 0.051668953452303344 4.279047876058466 0.17639678954446383 0.022897385067303627 0.6186042877527945 1.3226524378081411e-05 4.878554263274805 -0.4518136133470154 GVSAVAGPHDIGAS(ph)PGDKK ddPTM_A549_PD325901_60min_R1 2 GVSAVAGPHDIGASPGDKK 19 1 Q8IYB7;Q8IYB7-4;Q8IYB7-5;Q8IYB7-3;Q8IYB7-2;C9JGP4 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 GVS(0.001)AVAGPHDIGAS(0.999)PGDKK;GVSAVAGPHDIGAS(1)PGDKK 75.646 9.803200000000001e-05 57631000.0 4558.8 5625.200000000001 5778.5 6094.2 7221.1 6263.6 5847.9 5943.700000000001 6388.5 6683.6 7284.4 True False 5021.606019988814 6099.255345641115 6170.6637589433185 6470.6248930676 6713.914847442613 6212.591318289959 6070.445034593669 5825.148240757556 6120.013561607185 6261.59635536969 6388.464979616169 0.7860426622062381 0.9547294013667067 0.96590711205778 1.0128606658584778 1.0509433594556539 0.9724701220265941 0.95021966215089 0.9118228337079405 0.9579787290271545 0.9801409846259967 1.0 12.641253606705702 -5.229120514163148 2.7930753563936634 0.9787976155752153 0.7413478228980265 0.7219757380402678 0.03407714361053545 0.2167211069943055 2.134708535020361 0.005167368856371172 0.12124213190175646 5.9003732556662096e-06 5.229120514163148 -0.2374497926771888 GVSMS(ph)LPSSPLLPR ddPTM_A549_PD325901_60min_R1 1 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVS(0.038)MS(0.936)LPS(0.015)S(0.011)PLLPR 45.79 0.014756 2206100.0 2495.4 2666.3 2248.5 2483.9 2573.1 2893.1 2246.2 2882.4 2660.3 2727.1 3164.4 True False 2748.7311709836126 2890.9984583806627 2401.0967313289007 2637.3248616538026 2392.3743327131015 2869.5395528042486 2331.6803701678027 2824.9082708009423 2548.49684244245 2554.910440590204 2775.198860784335 0.9904627772176146 1.0417265945272116 0.8651980819314316 0.9503192361892344 0.8620551004539406 1.0339942096953914 0.840184969486769 1.017912017304071 0.9183114329047347 0.920622473831705 1.0 11.43837543817463 -10.986712834973645 1.1982933725441844 1.0006991758758217 0.943415628365857 0.0 0.07110272694928874 0.9686141267790693 2.4233856209773275 0.04660691235950546 0.010144290789313488 1.0310676596185803e-11 10.986712834973645 -0.05728354750996467 GVSMSLPS(ph)S(ph)PLLPR ddPTM_A549_PD325901_60min_R1 1 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 2 GVS(0.014)MS(0.05)LPS(0.968)S(0.968)PLLPR 48.091 0.034977 1912900.0 890.37 896.94 760.81 690.37 913.68 988.97 712.2 639.89 842.01 950.76 952.12 True False 980.759706944249 972.5282816112036 812.443141722189 733.0125869559714 849.5062688248828 980.9161562119589 739.3031607307938 627.1268919660062 806.6232478686491 890.7288513422833 835.0152759859621 1.1745410355351835 1.1646832214690563 0.9729679984152139 0.8778433257888021 1.0173541649544198 1.1747283964999575 0.8853768092539933 0.751036430112626 0.9659981931662405 1.0667216240930877 1.0 9.705658780639979 -7.781426714367013 24.998919707344584 0.9556419102690515 1.0536001958120864 0.2329952006568522 0.11344129743300906 373.26362811173374 466853.7487431894 0.01847636293151348 0.025546738261818917 1.6541438920583577e-08 7.781426714367013 0.09795828554303487 GVSMSLPS(ph)SPLLPR ddPTM_A549_MK2206_60min_R1 5 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVSMS(0.002)LPS(0.619)S(0.379)PLLPR;GVSMS(0.001)LPS(0.5)S(0.5)PLLPR;GVS(0.311)MS(0.037)LPS(0.326)S(0.326)PLLPR;GVSMS(0.001)LPS(0.499)S(0.499)PLLPR;GVSMS(0.002)LPS(0.499)S(0.499)PLLPR 95.417 5.0103000000000005e-05 25422300.0 4969.55 6045.05 5726.3099999999995 4858.549999999999 7698.320000000001 6268.03 5325.530000000001 5908.150000000001 9059.060000000001 8434.419999999998 8418.18 True False 5808.288546167605 6352.7172245038255 6538.386863878149 6048.894968108595 6565.907325902838 6931.308774218422 6293.109866223116 6745.648355450535 7007.197374346172 6529.078664040905 6327.7135760514275 0.9179126830503681 1.0039514507336473 1.0332937458838305 0.9559369107669348 1.0376429411648633 1.0953891466344854 0.9945314038929833 1.066048308662527 1.1073821989772727 1.0318227248388085 1.0 12.627468582361175 -3.251751561924079 0.5081481658186991 1.0503634881281136 7.873494480111456e-12 0.4229502260233027 0.04087409036224714 21.46049437379296 0.7222340282324966 0.009046432796786115 20.951287565495104 0.0005600779023300557 3.251751561924079 -1.0503634881202402 GVSMSLPS(ph)SPLLPR ddPTM_A549_PD325901_60min_R1 6 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVSMSLPS(0.5)S(0.5)PLLPR;GVS(0.001)MS(0.001)LPS(0.499)S(0.499)PLLPR;GVS(0.011)MS(0.028)LPS(0.48)S(0.48)PLLPR;GVSMS(0.001)LPS(0.5)S(0.5)PLLPR;GVS(0.008)MS(0.044)LPS(0.474)S(0.474)PLLPR;GVSMSLPS(0.5)S(0.5)PLLPR 96.745 1.7986e-05 40658300.0 9099.35 9174.0 9139.1 9891.2 11659.4 10533.8 9856.199999999999 9696.94 11543.1 12131.0 11315.4 True False 10023.10931341258 9947.125176155801 9759.334283872788 10502.156959454935 10840.483966746398 10448.016225270258 10231.283084519591 9503.526924597732 11057.983649211537 11365.04658971059 9923.677534230514 1.0100196503603718 1.0023627976467804 0.9834392794615863 1.0582928479113742 1.0923857541071313 1.0528371351478423 1.030997132789536 0.9576618034812676 1.1143030001799608 1.1452454546722473 1.0 13.276659140879435 -6.2662125149352885 24.22299244198896 1.049426069318297 0.9989827973531581 0.20427971869226236 0.04945543586955301 346.7105362854994 1759512.9343886245 0.006994308363641562 0.016732495974450437 5.417357359683717e-07 6.2662125149352885 -0.05044327196513898 GVSMSLPSS(ph)PLLPR ddPTM_A549_PD325901_60min_R1 2 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVSMS(0.001)LPS(0.13)S(0.869)PLLPR;GVSMSLPS(0.144)S(0.856)PLLPR 137.84 2.6076e-09 12604600.0 4318.7 4324.4 4768.5 4651.8 5257.0 5056.7 4418.6 5049.9 5396.4 5964.4 5566.8 True False 4757.131244741093 4688.83236448312 5092.119085319931 4939.131120995679 4887.766455665454 5015.519911743542 4586.752240950698 4949.17578293009 5169.608074486505 5587.806766109129 4882.118890852684 0.9743988934096275 0.9604092954942756 1.0430141500365162 1.0116777635730698 1.0011567855963834 1.0273244105424806 0.9395003160501898 1.0137352025988235 1.0588861496536823 1.1445454096946814 1.0 12.253291713159905 -8.518750695031525 24.9406490112059 1.028254892689522 0.995330813417473 0.22244442645546347 0.04635167439786864 234.8065840362804 1418638.6256748177 0.005682210150686106 0.006519835025290663 3.0286515141794005e-09 8.518750695031525 -0.0329240792720491 GVSNDT(ph)SSLETER ddPTM_A549_PD325901_60min_R1 1 GVSNDTSSLETER 13 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A0A0G2JRR0 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 GVS(0.088)NDT(0.343)S(0.343)S(0.224)LET(0.002)ER 56.138999999999996 0.017269999999999997 3651600.0 1009.3 961.55 985.61 1050.7 1120.4 1370.3 1121.1 1486.5 1207.3 1125.4 1002.6 True False 1111.7633929926099 1042.583193060018 1052.4994215544043 1115.5993526871655 1041.7069691701681 1359.1407311215162 1163.76407398946 1456.8505913633087 1156.5613794988435 1054.3420519380345 879.2865560050477 1.26439257532129 1.1857149252877157 1.1969925098551857 1.2687551573127442 1.184718408414046 1.5457312770669882 1.32353220465113 1.656855300941216 1.3153406834213033 1.1990881069856616 1.0 9.780189600371257 -10.413971622433523 0.9882046151037079 1.0174217862069626 1.3238889161803886 0.21716513082828526 0.15222620028628792 0.3965193798222686 0.7454837813105503 0.07397053894711214 0.027461794919709896 3.855035463236256e-11 10.413971622433523 0.30646712997342607 GVSNDTSS(ph)LETER ddPTM_A549_PD325901_60min_R1 1 GVSNDTSSLETER 13 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A0A0G2JRR0 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 GVS(0.013)NDT(0.214)S(0.214)S(0.552)LET(0.006)ER 67.887 0.004139 2348400.0 1464.4 1095.1 1287.9 1278.9 1385.3 1401.8 1114.9 1263.9 1377.3 1461.5 1276.2 True False 1613.064809965699 1187.3879202537846 1375.3046387718439 1357.8947484073637 1288.0013070255566 1390.384205565309 1157.3281295966892 1238.6905229896308 1319.4168706897667 1369.2206405788502 1119.2354904983465 1.4412202111706374 1.0608919484183734 1.228789339193918 1.2132341763061434 1.150786691415643 1.2422624348216762 1.0340345167944789 1.1067291320775543 1.1788554615099707 1.2233534874498988 1.0 10.128297900270741 -14.999117820432796 0.03127235139013122 3.515796177661707e-05 1.8536413430811673 0.1250151084351736 0.10948170573989936 702.6153915151018 1.6984194250907796 79.02927525792852 31.678494117468453 1.0020333579950872e-15 14.999117820432796 1.8536061851193908 GVSNESVPDS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 GVSNESVPDSPAR 13 0 Q86XJ1;G3V1N3 Q86XJ1 GAS2L3 GAS2-like protein 3 1 GVSNESVPDS(1)PAR;GVSNESVPDS(1)PAR 153.7 6.367899999999999e-14 8266200.0 2532.5 2891.6 2876.9 2746.7 3874.7 2858.7 2318.5 3088.6000000000004 3515.2 4468.3 4124.6 True False 2959.924086319578 3038.7700889778043 3284.8876796210916 3419.641623304048 3304.736762784052 3161.2057365485184 2739.741438849896 3526.4185084408014 2719.0128126209206 3458.9079266308727 3100.347986831086 0.9547070518832186 0.9801383915241652 1.0595222515581635 1.1029863866343974 1.0659244629380702 1.0196293286998521 0.8836883635279369 1.1374266770760817 0.8770024604238268 1.1156515143857373 1.0 11.598214439096994 -8.78490056760662 24.999068023183888 0.9419178436557212 1.0241319910801243 0.0 0.08858673742300784 281.984466918931 300467.2288100986 0.013440823166006975 0.014312719734342724 1.6409654317678726e-09 8.78490056760662 0.08221414742440314 GVSNESVPDS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 GVSNESVPDSPAR 13 0 Q86XJ1;G3V1N3 Q86XJ1 GAS2L3 GAS2-like protein 3 1 GVSNESVPDS(1)PAR;GVSNESVPDS(1)PAR 122.78 6.8673e-06 13208000.0 3433.7 3788.0 3555.0 3527.2 3760.0 3531.3 3598.2999999999997 3491.0 3640.8 3409.7 4437.3 True False 3782.2866962436606 4107.228053987155 3796.263677951632 3745.067133147588 3495.9105712958153 3502.5422635987843 3735.2352755653137 3421.369266363479 3487.789837223049 3194.4109600969596 3891.540230362257 0.9719253746200059 1.0554247960594307 0.9755170069508042 0.962361150458662 0.8983359709403254 0.9000401014157674 0.9598346809889222 0.8791812659855219 0.8962492048806023 0.820860320336351 1.0 11.926125556302614 -6.158781358872973 2.637686436939788 0.938333447143889 1.0133235719718177 0.2911700512812402 0.05276121805787257 0.2853676383834631 3.824610123387454 0.0069709707549142136 0.022001494820675847 6.937749920552305e-07 6.158781358872973 0.07499012482792866 GVSPS(ph)QAQGLGSNLVTEVR ddPTM_A549_MK2206_60min_R1 1 GVSPSQAQGLGSNLVTEVR 19 0 U3KQS6;A0A0A0MQU7;F5H0K0;A0A0A0MTK8;P20823-6;P20823-3;P20823-2;P20823;P20823-7 U3KQS6 HNF1A Hepatocyte nuclear factor 1-alpha 1 GVS(0.446)PS(0.554)QAQGLGSNLVTEVR 121.26 3.2604e-14 8946800.0 926.55 1155.2 1254.3 1047.7 1862.6 1199.1 1108.6 1392.7 1503.1 1725.7 1894.9 True False 1082.9289880274057 1213.9947457418587 1432.178600767748 1304.3865470330406 1588.6140073712997 1325.9879661018385 1310.0182700491675 1590.1194899648713 1162.6502499574717 1335.863171449299 1424.3440334205075 0.7603001540483119 0.8523184829345597 1.0055004740170999 0.9157805392708435 1.115330264385848 0.930946411112159 0.9197344456895074 1.116387229949116 0.8162706640230815 0.9378795713008148 1.0 10.476081938945951 -5.521977183907356 4.151305700715143 0.9449869738007493 0.7739333338369644 0.3344592562902339 0.08732353775834166 0.20907728088104072 8.27597710855947 0.013480012843501109 0.07243677475896804 3.006234233985748e-06 5.521977183907356 -0.17105363996378486 GVSRS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 GVSRSPPK 8 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 GVS(0.023)RS(0.977)PPK;GVS(0.028)RS(0.972)PPK 59.067 0.0037073 9054700.0 3412.9 3702.2 2998.1000000000004 2777.7 3689.4 2464.3 3157.6 3146.5 4250.1 4609.7 4637.0 True False 3988.914082606152 3890.6261666252653 3423.2756620918326 3458.2366246956913 3146.6941473186275 2725.0705903300504 3731.2950473635674 3592.526010752114 3287.4591360150716 3568.3655684243113 3485.504925310512 1.1444293346539434 1.1162302880058796 0.9821462701811745 0.9921766569839543 0.9027943482358726 0.7818295049711579 1.0705177950741696 1.030704614606754 0.9431801723023538 1.0237729238343902 1.0 11.76715195093527 -5.745580867780098 3.242900912117473 0.9663994346597548 1.14118263215291 0.42104230630890593 0.07308754411610358 0.16689094428953108 3.5388494028257136 0.01001152422885449 0.04376120138299797 1.796466538074925e-06 5.745580867780098 0.17478319749315518 GVSRS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 GVSRSPPK 8 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 GVS(0.047)RS(0.953)PPK 55.083999999999996 0.0060244 8040500.0 2912.4 3022.9 3068.4 3083.9 3528.4 2948.0 3092.2 3052.8 3231.1 4059.2 3655.0 True False 3208.064704004438 3277.650391868472 3276.6400757881233 3274.385498954935 3280.577356319193 2923.992465406286 3209.875363116765 2991.9095091247295 3095.3081034529214 3802.901419252594 3205.4581709539702 1.0008131545980188 1.0225216543359281 1.0222064681670666 1.021503112605101 1.0234347732395668 0.9121917396713626 1.0013780220883308 0.9333796760275032 0.9656367166169362 1.1863831054519174 1.0 11.646314867316075 GVSS(ph)ES(ph)SGDREK ddPTM_A549_PD325901_60min_R1 1 GVSSESSGDREK 12 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 2 GVS(0.346)S(0.631)ES(0.561)S(0.462)GDREK 60.49 0.027420999999999997 4323300.0 860.64 1142.6 886.84 777.05 1194.8 718.2 792.2 748.82 924.58 926.46 1036.5 True False 948.0115392303184 1238.8909119550492 947.0262954021453 825.0466136914076 1110.8813698362342 712.351217318451 822.3476045084735 733.8841976620743 885.723117913559 867.9631574893474 909.0170709148532 1.0428973993593105 1.3628906998503387 1.0418135431153552 0.907624994172072 1.2220687656813976 0.7836499886647081 0.9046558429104595 0.8073381910457175 0.9743745703500918 0.9548370270052373 1.0 9.82816357758569 -5.970779712673123 11.381720405209744 0.9669246387049648 1.2029994642384694 0.36281326518908286 0.12934938464075935 0.49682505061994514 189.89670537143743 0.016477274789257285 0.05113387655485909 1.0695972738137054e-06 5.970779712673123 0.23607482553350456 GVSS(ph)ESSGDR ddPTM_A549_PD325901_60min_R1 1 GVSSESSGDR 10 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.336)S(0.526)ES(0.135)S(0.003)GDR 57.348 0.013369999999999998 3004100.0 539.84 556.02 547.26 482.48 772.12 320.45 404.78 518.93 483.39 507.78 351.15 True False 594.6441593907966 602.8777567523598 584.4003545417189 512.2816938084172 717.8889548693949 317.8403614448588 420.184124404115 508.5795340572903 463.0747993340059 475.7186841417233 307.960776123252 1.9309087568762597 1.957644620661289 1.8976454141284222 1.663464095191759 2.331105161853734 1.0320806611997002 1.3644079278328256 1.6514425650549298 1.5036811023903713 1.5447379050354493 1.0 8.266602801422081 -7.857966952087294 0.07667042910203709 4.293498970315714e-19 3.1943615038729605 0.3156554505851825 0.31654241682530715 12.469134584767843 0.5062952794978772 8.946880330357967 11.58984378277894 1.3868613589470782e-08 7.857966952087294 3.1943615038729605 GVSS(ph)ESSGDREK ddPTM_A549_MK2206_60min_R1 1 GVSSESSGDREK 12 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.292)S(0.706)ES(0.002)SGDREK 154.1 1.3809e-28 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GVSS(ph)ESSGDREK ddPTM_A549_PD325901_60min_R1 1 GVSSESSGDREK 12 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.295)S(0.577)ES(0.045)S(0.083)GDREK 100.38 5.1749e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GVSSESS(ph)GDREK ddPTM_A549_PD325901_60min_R1 1 GVSSESSGDREK 12 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.002)S(0.038)ES(0.123)S(0.836)GDREK 62.338 0.0063463 3008300.0 993.08 963.8 780.83 941.04 1305.4 979.01 1091.3 937.28 1104.2 1381.8 1221.9 True False 1093.8967505331436 1045.0228084563944 833.8218193122283 999.1659035430962 1213.7132073855214 971.0372671497306 1132.8300186822744 918.5852151180637 1057.794313958935 1294.5529121805366 1071.614046262286 1.0207935910774764 0.9751858069622735 0.7780990014273701 0.9323934368237485 1.1326029288425878 0.9061445867909627 1.0571250186888699 0.8571978113967655 0.9871038156400121 1.2080402610397332 1.0 10.065569681313484 -8.7354756763358 0.2317831101233622 1.0117350397679101 0.9385854611396385 0.08028504401582826 0.11065008580636457 6.276994520282623 1.3011461442181962 0.16426236560672333 0.15176696154042676 1.8387569348035525e-09 8.7354756763358 -0.07314957862827165 GVSSS(ph)FDMPK ddPTM_A549_PD325901_60min_R1 1 GVSSSFDMPK 10 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 GVS(0.034)S(0.426)S(0.54)FDMPK 133.81 8.3535e-07 4360000.0 5712.0 5853.9 6345.3 5985.8 6830.9 6909.8 5820.7 6558.2 7323.8 7350.2 7621.5 True False 6291.878035047843 6347.228697263837 6775.9302153886065 6355.529271261865 6351.121149325688 6853.528879736889 6042.209923709254 6427.391556191628 7016.006155200549 6886.107117607017 6684.103816669131 0.9413196155566678 0.9496005554902993 1.0137380270022847 0.9508423934727267 0.9501829001349387 1.0253474613373357 0.9039670970760371 0.9615936156112205 1.0496554732892844 1.03022144875041 1.0 12.706518425995144 -8.746088339498398 24.81112520063051 1.0234484167938844 0.9627817695212374 0.4262815446760342 0.03328901821911315 160.522368349308 259444.00180156046 0.005800212634027201 0.006564375092589997 1.7943685986058142e-09 8.746088339498398 -0.060666647272647034 GVSTVIDAAS(ph)GTFDR ddPTM_A549_PD325901_60min_R1 2 GVSTVIDAASGTFDR 15 0 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 GVSTVIDAAS(0.99)GT(0.01)FDR;GVSTVIDAAS(0.99)GT(0.01)FDR 127.71 7.554600000000001e-22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GVT(ph)PAGFPK ddPTM_A549_MK2206_60min_R1 2 GVTPAGFPK 9 0 Q8WX93-4;Q8WX93-3;Q8WX93;A0A3B3ISX8 Q8WX93-4 PALLD Palladin 1 GVT(1)PAGFPK;GVT(1)PAGFPK 121.83 0.00012858 40398000.0 3980.2 4659.6 4056.6000000000004 3992.7000000000003 5501.0 3822.7999999999997 3796.3999999999996 3972.3 6316.0 5422.6 6859.6 True False 4651.960453452786 4896.753737239235 4631.8868786370485 4970.911679239114 4691.810187130638 4227.326158630732 4486.156738602437 4535.385689658547 4885.436084579465 4197.630893840739 5156.172004671125 0.9022120381628931 0.9496878173969224 0.8983189223402339 0.9640701812770834 0.9099405882659057 0.8198574746538856 0.8700556797830441 0.8796032571352953 0.94749284549732 0.8140983058823453 1.0 12.332084676008465 -9.275973142515367 1.3978673976780756 0.9851404187765221 0.9005525320913513 0.0 0.06386124462351071 0.24510197761668626 0.9922179799166859 0.009351963818898155 0.008116650104279498 5.296962001625033e-10 9.275973142515367 -0.08458788668517081 GVT(ph)PAGFPK ddPTM_A549_PD325901_60min_R1 4 GVTPAGFPK 9 0 Q8WX93-4;Q8WX93-3;Q8WX93;A0A3B3ISX8 Q8WX93-4 PALLD Palladin 1 GVT(1)PAGFPK;GVT(1)PAGFPK;GVT(1)PAGFPK;GVT(1)PAGFPK 130.94 5.2031000000000004e-05 65944000.0 17032.1 16708.3 16741.7 17124.8 19874.699999999997 17403.100000000002 15950.100000000002 19018.600000000002 20501.1 18709.4 19505.200000000004 True False 18761.186253630683 18116.367078783955 17877.89243802049 18182.56000275739 18478.7696359928 17261.374923579428 16557.089783729614 18639.25910319694 19639.510061495683 17528.085291033814 17106.184053650173 1.0967487661064514 1.0590536745054036 1.0451128306552768 1.0629232063522394 1.0802391449804225 1.0090722085909125 0.9679008323423604 1.0896211010438435 1.148094162900401 1.0246636675988303 1.0 14.062230347391475 GVTDTREPS(ph)PGSHSALPGKK ddPTM_A549_MK2206_60min_R1 3 GVTDTREPSPGSHSALPGKK 20 2 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 GVT(0.019)DT(0.119)REPS(0.821)PGS(0.02)HS(0.021)ALPGKK;GVT(0.004)DT(0.21)REPS(0.773)PGS(0.013)HSALPGKK;GVT(0.012)DT(0.047)REPS(0.804)PGS(0.118)HS(0.019)ALPGKK 65.207 0.00043659 21477700.0 2490.66 3362.45 3034.46 2746.9 4227.4 3134.5200000000004 2718.99 2876.13 4160.5 4134.5 4656.5 True False 2911.0225172093665 3533.5843428148496 3464.7920568330546 3419.8906233130256 3605.555060002919 3466.212825874019 3212.995287823368 3283.830235278717 3218.1533929532725 3200.5135784650406 3500.162537137894 0.8316820965662151 1.0095486439050585 0.9898946177700187 0.9770662325040176 1.0301107510713503 0.9903005329313547 0.9179560245366934 0.9381936411341418 0.9194297004232203 0.9143899874667311 1.0 11.773206202742026 -5.250206476622635 24.33568988283776 0.9680073082079161 0.8316819802354997 0.5114991512901234 0.03848582765916361 767.2130798368241 1662094.3978369127 0.0056974393585636895 0.11556700353627221 5.620740348018324e-06 5.250206476622635 -0.13632532797241648 GVTDTREPS(ph)PGSHSALPGKK ddPTM_A549_PD325901_60min_R1 2 GVTDTREPSPGSHSALPGKK 20 2 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 GVT(0.001)DT(0.164)REPS(0.803)PGS(0.031)HS(0.001)ALPGKK;GVT(0.004)DT(0.016)REPS(0.934)PGS(0.045)HS(0.001)ALPGKK 89.365 1.1038e-06 21641000.0 2822.0 3224.9 2620.8999999999996 3549.5 3284.1 3508.1000000000004 3048.3 3797.1 3355.8 2905.2 3611.0 True False 3108.487362553401 3496.6736407875323 2798.77003475202 3768.744553500613 3053.436145529943 3479.5311967068487 3164.3047245937655 3721.363861732676 3214.7673961088517 2721.7651761954653 3166.869892014988 0.9815645948673818 1.1041418687910476 0.8837653993329176 1.1900534856209926 0.9641811156274341 1.0987288127877344 0.999189999113102 1.1750921220716395 1.0151245569685807 0.8594496360769922 1.0 11.628841881424915 -8.975063385120867 24.996363533030312 1.0066725192221857 1.050638405657844 0.09704512267824883 0.09749559096111145 393.42670084663683 394373.39603634377 0.013531895205333593 0.014038379142725934 1.059099138764524e-09 8.975063385120867 0.04396588643565824 GVTDTREPSPGS(ph)HSALPGKK ddPTM_A549_MK2206_60min_R1 1 GVTDTREPSPGSHSALPGKK 20 2 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 GVT(0.001)DT(0.183)REPS(0.364)PGS(0.451)HS(0.003)ALPGKK 52.79 0.0028585999999999998 7932900.0 1370.5 1248.9 1508.1 1105.8 1360.7 1239.7 1304.3 829.73 1959.6 2052.2 1535.3 True False 1601.8068944919955 1312.4636755168 1721.9712571297466 1376.7210496412479 1160.5428325083908 1370.8842311537405 1541.2744268673375 947.3467684415543 1515.7537288381748 1588.6065946852002 1154.0426378756154 1.3879962853371115 1.1372748566143183 1.4921210019584594 1.192955099280858 1.0056325428709818 1.1878973845171712 1.3355437453373007 0.820894079083117 1.3134295727828604 1.376557973290778 1.0 10.172480812211631 -13.747189757850226 0.36505105990041753 5.9848166027750555e-21 1.2255173046781895 0.0 0.20838152038072424 29.075359746012577 0.8731497260187686 21.315565458953348 0.04856582146508474 1.7898236490765654e-14 13.747189757850226 1.2255173046781895 GVTDTREPSPGS(ph)HSALPGKK ddPTM_A549_PD325901_60min_R1 1 GVTDTREPSPGSHSALPGKK 20 2 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 GVTDT(0.003)REPS(0.415)PGS(0.557)HS(0.025)ALPGKK 82.59299999999999 2.8020999999999998e-05 8801800.0 995.62 1514.3 1254.8 1275.1 1681.7 1349.4 1314.3 1594.2 1640.4 1730.2 1676.4 True False 1096.6946094632942 1641.9153754363128 1339.9582737253745 1353.8600310377892 1563.5831935500466 1338.410933792144 1364.3164057125555 1562.4024303742942 1571.4596926446627 1620.95487672222 1470.2134275751655 0.7459424522275526 1.116787089983484 0.9114039149644948 0.9208595198798594 1.0635076270041124 0.9103514555703628 0.927971667326378 1.062704503353079 1.0688650118210956 1.1025303172449414 1.0 10.521809887719531 -8.259612526648521 24.968050775405903 1.0356920933532112 0.9505146449828562 0.25191690567340463 0.09262115126775593 208.7350509983435 2852839.4797627837 0.013490330689176658 0.01696483923356494 5.50031387712711e-09 8.259612526648521 -0.08517744837035501 GVTEAIQNFS(ph)FR ddPTM_A549_PD325901_60min_R1 2 GVTEAIQNFSFR 12 0 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 GVTEAIQNFS(1)FR;GVTEAIQNFS(1)FR 96.866 0.00025531 5973500.0 2248.23 2266.91 2483.8999999999996 2736.3 2485.89 2567.7 2406.25 2539.36 2677.2 2788.8 2961.9 True False 2476.4686545405507 2457.950461421336 2652.472390904093 2905.3150364118137 2311.2896622549342 2546.7895025182224 2497.8211605005245 2488.710472710617 2564.686594213786 2612.714692060416 2597.605077031071 0.9533661126698394 0.9462371640536856 1.0211222692618591 1.1184590999230875 0.8897771576950487 0.9804375287982853 0.9615861866713803 0.9580788452858605 0.9873273720057135 1.0058167483436762 1.0 11.342966394155575 -9.570896161823871 1.5545647111009906 0.9967780657623474 0.9802818650362733 0.024926706297910717 0.05378078837656207 1.5220647814408088 7.45659115684782 0.012824201998796886 0.009996992912896194 2.6859865781716793e-10 9.570896161823871 -0.01649620072607405 GVTEAIQNFSFRS(ph)QEDMNEPLKR ddPTM_A549_PD325901_60min_R1 2 GVTEAIQNFSFRSQEDMNEPLKR 23 2 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 GVTEAIQNFS(0.187)FRS(0.813)QEDMNEPLKR;GVTEAIQNFS(0.276)FRS(0.724)QEDMNEPLKR 75.17399999999999 4.2562e-05 34752000.0 6069.8 6178.2 5978.6 7202.0 7028.1 7393.1 5509.299999999999 7558.2 7881.0 7817.700000000001 7378.9 True False 6686.001627649409 6698.858596394782 6384.343748242371 7646.851183071253 6534.470501628759 7332.893044774491 5718.959426304639 7407.445771706805 7549.788976915748 7324.089087822976 6471.342078701022 1.0331707930654588 1.035157547681273 0.9865563696988007 1.1816484262575389 1.0097550743199792 1.1331332752303531 0.8837362260801075 1.144653718134722 1.166649650891458 1.1317728221984402 1.0 12.65984922555053 GVTIPYRPKPS(ph)SSPVIFAGGQAYTIQGQYAIPQPDLTK ddPTM_A549_MK2206_60min_R1 2 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTK 38 2 F8VRH0;Q15366-4;Q15366-5;Q15366-7;Q15366-8 F8VRH0;Q15366-4 PCBP2 Poly(rC)-binding protein 2 1 GVT(0.01)IPY(0.004)RPKPS(0.328)S(0.328)S(0.328)PVIFAGGQAYTIQGQYAIPQPDLTK;GVT(0.003)IPYRPKPS(0.332)S(0.332)S(0.332)PVIFAGGQAYTIQGQYAIPQPDLTK 97.801 2.9075e-10 20823000.0 1259.04 1571.6399999999999 1418.6 1131.42 2280.7 1886.42 1769.33 1326.74 2398.3 2011.2200000000003 2315.5 True False 1471.535171427364 1651.6297629828043 1619.7788113283323 1408.6179507913746 1945.2120512250203 2086.0397122957474 2090.7943584215172 1514.8094579708443 1855.088879298121 1556.8840051470463 1740.497445451045 0.8454681592744423 0.9489412163743735 0.9306413034743474 0.8093191716385054 1.1176184465590664 1.1985307520834403 1.2012625263461354 0.8703313308100178 1.065838323489972 0.8945051940272076 1.0 10.765283981264439 -6.764740741251839 24.999982256744193 1.0503546853415522 0.8916208605461191 0.36373732210497145 0.10550245832048281 70.54153303172917 534190.9565642687 0.014236756439796489 0.02771338496449984 1.7189342250670465e-07 6.764740741251839 -0.15873382479543308 GVTIPYRPKPS(ph)SSPVIFAGGQAYTIQGQYAIPQPDLTK ddPTM_A549_PD325901_60min_R1 1 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTK 38 2 F8VRH0;Q15366-4;Q15366-5;Q15366-7;Q15366-8 F8VRH0;Q15366-4 PCBP2 Poly(rC)-binding protein 2 1 GVT(0.001)IPYRPKPS(0.333)S(0.333)S(0.333)PVIFAGGQAYTIQGQYAIPQPDLTK 150.94 9.964899999999999e-41 21105000.0 1447.6 1383.7 1436.1 1388.0 1245.5 1681.7 1642.2 1590.1 1761.2 1495.7 1624.0 True False 1594.5592863332038 1500.3092550955726 1533.5623819708394 1473.7336076232857 1158.020376741739 1668.0047927658582 1704.6948196463197 1558.384208090682 1687.1828887379781 1401.2612467422405 1424.2582953841986 1.1195717037428705 1.053396887318714 1.0767445672887275 1.0347375980883726 0.8130690763709816 1.1711392506342455 1.1969000462703798 1.094172463759674 1.184604572222523 0.983853315991567 1.0 10.475995093661451 GVTIPYRPKPS(ph)SSPVIFAGGQLTK ddPTM_A549_MK2206_60min_R1 1 GVTIPYRPKPSSSPVIFAGGQLTK 24 2 F8VZX2;H3BRU6 F8VZX2 PCBP2 1 GVTIPYRPKPS(0.383)S(0.383)S(0.234)PVIFAGGQLTK 181.31 8.2921e-51 20446000.0 3011.3 3606.9 2976.4 3141.3 5278.8 4330.7 3622.9 3539.0 5748.3 5570.4 5601.1 True False 3519.533820783474 3790.47580368448 3398.4982757913763 3910.9186410183156 4502.295512784078 4788.971799513995 4281.134034422814 4040.6640877329537 4446.319228148847 4312.0427711891825 4210.192287504145 0.8359556002298171 0.9003094264683864 0.8072073776483139 0.9289168698127938 1.0693800200401526 1.1374710399160792 1.0168500016327577 0.9597338581721432 1.056084597690592 1.0241914090212294 1.0 12.039670410090002 -6.560621563969913 4.372470199148674 1.031894195521905 0.8541627360010297 0.7595911863238684 0.0472350755926772 0.08042828500446353 3.452639063326802 0.00713335583563647 0.01566738144861784 2.7502896598494394e-07 6.560621563969913 -0.17773145952087532 GVTIPYRPKPSS(ph)SPVIFAGGQDR ddPTM_A549_MK2206_60min_R1 1 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 GVTIPYRPKPS(0.064)S(0.468)S(0.468)PVIFAGGQDR 161.72 1.3568e-33 82503000.0 3217.5 4170.8 4028.8 3437.0 5596.4 4221.2 4393.1 3785.4 6379.8 6072.6 6114.5 True False 3760.53533967749 4383.075905072839 4600.144420611581 4279.065154292795 4773.1769735062535 4667.884582194216 5191.269404792531 4321.992042301305 4934.785486447132 4700.795442396135 4596.100898384977 0.8182012150775244 0.9536509319482102 1.0008797722930811 0.9310207171031462 1.0385274559972126 1.0156183872800666 1.1294942212031702 0.9403605660223886 1.0736895458890308 1.0227789916552847 1.0 12.166194754535109 -4.026089886056847 0.6320438342016391 1.0330417315153084 1.4014856267525924e-16 0.5745107670712217 0.051074376240578624 6.518362111166276 0.5499268048701739 0.008361343270424357 7.007615849519593 9.416946735279325e-05 4.026089886056847 -1.0330417315153082 GVTIPYRPKPSS(ph)SPVIFAGGQDR ddPTM_A549_PD325901_60min_R1 1 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 GVTIPYRPKPS(0.074)S(0.542)S(0.384)PVIFAGGQDR 133.44 8.053499999999999e-23 1767500000.0 8540.1 8070.0 9216.2 8940.4 11226.0 11172.0 9654.8 10839.0 11412.0 9023.4 8955.7 True False 9407.08466511067 8750.087221667465 9841.666753512749 9492.628202878404 10437.52448759756 11081.0189360648 10022.21869730928 10622.807641968988 10932.39332629901 8453.660984056922 7854.205674859772 1.1977130539401901 1.1140639275178756 1.2530441856156842 1.208604484761966 1.3289089845210744 1.4108389052674812 1.2760321173392515 1.3524992955011514 1.391915844690965 1.076322843329138 1.0 12.939249662423855 -10.905107611745397 1.1603794839117219 1.0001865969521067 1.289502323470198 0.534976391280744 0.08655986947233733 0.2895001545249821 0.6930666218173798 0.066756935636733 0.015937265015537754 1.244206277670323e-11 10.905107611745397 0.28931572651809145 GVTIPYRPKPSS(ph)SPVIFAGGQLTK ddPTM_A549_MK2206_60min_R1 1 GVTIPYRPKPSSSPVIFAGGQLTK 24 2 F8VZX2;H3BRU6 F8VZX2 PCBP2 1 GVT(0.002)IPYRPKPS(0.066)S(0.466)S(0.466)PVIFAGGQLTK 150.95 6.7656e-29 21260000.0 2112.8 2334.6 1851.8 2126.8 2971.8 2264.3 2122.3 2037.4 2674.8 3007.1 2839.6 True False 2469.388986999408 2453.4211681171605 2114.4130853079137 2647.8660954756797 2534.652156719656 2503.9067230793053 2507.894438503833 2326.2076892758178 2068.962070777889 2327.794021478348 2134.4489510269 1.156921080643023 1.1494400777009919 0.9906130967857784 1.2405384978646459 1.1874972017954402 1.1730928124913254 1.1749610770954562 1.0898399271421606 0.9693190693469128 1.0905831317063959 1.0 11.059647943157202 -8.593628985642502 3.5886805986435992 0.9855751737468563 1.1517227636439165 0.41488864078188625 0.06600993484404266 0.10997084323561658 2.857904290034747 0.010005336672334827 0.011448483259768315 2.5490069192455906e-09 8.593628985642502 0.16614758989706013 GVTIPYRPKPSS(ph)SPVIFAGGQLTK ddPTM_A549_PD325901_60min_R1 2 GVTIPYRPKPSSSPVIFAGGQLTK 24 2 F8VZX2;H3BRU6 F8VZX2 PCBP2 1 GVTIPYRPKPS(0.053)S(0.473)S(0.473)PVIFAGGQLTK;GVTIPYRPKPS(0.071)S(0.547)S(0.382)PVIFAGGQLTK 240.34 1.6543999999999997e-99 78177000.0 9245.1 9101.099999999999 11944.2 11179.1 11510.400000000001 11284.2 11824.0 10676.400000000001 11910.9 11122.3 11616.5 True False 10183.655746117096 9868.08163731322 12754.805238309395 11869.607617421818 10701.9492127243 11192.305216464587 12273.968790341065 10463.450826526227 11410.326294270491 10420.036079856407 10187.74414306068 0.9995986945798626 0.9686228372779468 1.2519754186207408 1.1650869368864871 1.0504729076862287 1.0986048588674224 1.2047778799687863 1.0270625841789855 1.120005188002544 1.0228011160796526 1.0 13.314547012612179 -10.816234737297123 0.8301622243988906 0.9931555905849759 1.1023029117469068 0.14016556229903843 0.08221366499666836 1.0744802618852058 1.1730226987670986 0.07831636644486144 0.015125497705999455 1.5267406279039225e-11 10.816234737297123 0.10914732116193082 GVTIPYRPKPSSS(ph)PVIFAGGQAYTIQGQYAIPQPDLTK ddPTM_A549_PD325901_60min_R1 1 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTK 38 2 F8VRH0;Q15366-4;Q15366-5;Q15366-7;Q15366-8 F8VRH0;Q15366-4 PCBP2 Poly(rC)-binding protein 2 1 GVTIPYRPKPS(0.062)S(0.403)S(0.536)PVIFAGGQAYTIQGQYAIPQPDLTK 211.29 9.395599999999997e-114 20200000.0 1999.7 1930.4 2192.8 2545.7 2758.4 2440.9 2128.0 1961.9 2803.0 2301.6 1760.8 True False 2202.708071898665 2093.081582739389 2341.6165943775914 2702.9421072958216 2564.659499963398 2421.022119677815 2208.98220448628 1922.7683654192247 2685.19965769507 2156.2765832064874 1544.232762630847 1.4264093634084023 1.355418453351223 1.5163624623455558 1.7503463031641218 1.6607985285806857 1.567783159549871 1.4304723082826751 1.2451285919769517 1.7388568114047807 1.3963416884983881 1.0 10.59267451148047 -10.94247079197267 1.1180039183951702 0.9901964777047476 1.5373465590639575 0.2175237031445557 0.18705190908507227 0.28855160317243334 0.6215739824432401 0.12642683380020184 0.027446826551907513 1.1416400818629328e-11 10.94247079197267 0.5471500813592098 GVTIPYRPKPSSS(ph)PVIFAGGQDR ddPTM_A549_MK2206_60min_R1 3 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 GVTIPYRPKPS(0.001)S(0.005)S(0.994)PVIFAGGQDR;GVTIPYRPKPS(0.004)S(0.029)S(0.967)PVIFAGGQDR;GVTIPYRPKPS(0.066)S(0.066)S(0.867)PVIFAGGQDR 210.96 5.193999999999999e-74 1778849000.0 13690.7 15111.2 16183.0 15036.699999999999 23368.4 16636.0 18052.4 16298.3 24397.8 21020.8 24376.1 True False 16001.3554545214 15880.295534846233 18477.99274194728 18720.692175023105 19930.939315932297 18396.41047791693 21332.287405949493 18608.63393645041 18871.7372552807 16272.186680420364 18322.841623864908 0.8733009749797843 0.8666939255842643 1.008467634074853 1.0217133651714814 1.087764645085012 1.004015144351638 1.164245581764178 1.015597597711769 1.0299569053034259 0.8880820461399594 1.0 14.161355642741166 -5.797934001387131 4.407583364641663 1.0296829564511163 0.8674351953904357 0.47354533911253227 0.06286735926280065 0.0885537675784961 3.773662674373283 0.0064832078160995555 0.023297919943888322 1.5924507092931886e-06 5.797934001387131 -0.16224776106068062 GVTIPYRPKPSSS(ph)PVIFAGGQDR ddPTM_A549_PD325901_60min_R1 3 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 GVTIPYRPKPS(0.001)S(0.044)S(0.955)PVIFAGGQDR;GVTIPYRPKPSS(0.051)S(0.949)PVIFAGGQDR;GVTIPYRPKPS(0.099)S(0.135)S(0.767)PVIFAGGQDR 215.03 3.135099999999999e-74 2294230000.0 30755.7 28590.1 29166.7 30796.2 36671.6 36019.3 31274.1 35022.200000000004 38830.9 31572.5 31886.6 True False 33877.996022850326 30999.48806396469 31146.12765561514 32698.411330755218 34095.91332615203 35725.970762960875 32464.252989344164 34323.65474661559 37198.9723110922 29579.006961803454 27964.750345811422 1.2114535479099886 1.1085201076578828 1.1137638373474779 1.1692724206870242 1.2192461189362607 1.277535837837792 1.160899081446893 1.2273899935515287 1.3302093475210974 1.057724692551522 1.0 14.771321830328244 -4.860875636713957 17.429711034631868 1.1706322694137965 12.074057583052848 0.01787942984745239 0.09121900630958896 1105.1129337503912 138224.35053781225 0.016244690366502636 787.7221586772896 1.377603899003931e-05 4.860875636713957 10.903425313639051 GVTIPYRPKPSSSPVIFAGGQDR ddPTM_A549_MK2206_60min_R1 2 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 0 ; 87.46799999999999 4.3891000000000006e-07 14917300.0 5529.5 4574.5 5454.9 4880.4 5962.2 4770.2 4669.8 4876.200000000001 7325.3 9235.6 10654.2 False True 6462.744416704484 4807.322510730722 6228.486844716565 6076.098219089483 5085.168278078584 5274.97939779751 5518.242213129721 5567.416282736201 5666.131246100369 7149.271545597229 8008.468099038879 0.8069888444058482 0.6002799101250916 0.7777376107003617 0.7587091743324412 0.6349739070183561 0.6586752088618018 0.6890509077250345 0.6951911668855075 0.7075174897406883 0.892713994384923 1.0 12.96731058756041 -10.549427959364184 0.6841099269473357 1.0182866183183932 0.6970715962140839 0.6605836902183397 0.06558429920439064 0.27941589559803104 0.2153876156869469 0.050576781180875136 0.011503586351311589 2.822097672965195e-11 10.549427959364184 -0.3212150221043093 GVTQEVDGLS(ph)QTDGTLTYFDKVDK ddPTM_A549_PD325901_60min_R1 1 GVTQEVDGLSQTDGTLTYFDKVDK 24 1 Q8NB49;H7C0E8;A0A067XG54;Q8NB49-2;Q8NB49-3;Q8NB49-4 Q8NB49 ATP11C Phospholipid-transporting ATPase IG;Phospholipid-transporting ATPase 1 GVTQEVDGLS(0.974)QT(0.022)DGT(0.005)LTYFDKVDK 134.69 2.4532e-23 8509900.0 1841.0 1729.0 1579.4 1652.9 2023.6 1876.8 1877.3 1969.2 1969.6 2122.9 2095.3 True False 2027.89696472743 1874.7088979260275 1686.5875817037438 1754.995878991736 1881.469317041014 1861.5159630510561 1948.7416787979764 1929.9227611924841 1886.8245614684995 1988.859731703619 1837.591383201054 1.1035625130081241 1.0201990034695936 0.9178251471585244 0.9550523010913133 1.0238779601608303 1.0130195320182258 1.0604869486290802 1.0502458701295119 1.0267922339631796 1.0823188168411293 1.0 10.843600281447976 GVTQEVDGLSQT(ph)DGTLTYFDKVDK ddPTM_A549_MK2206_60min_R1 1 GVTQEVDGLSQTDGTLTYFDKVDK 24 1 Q8NB49;H7C0E8;A0A067XG54;Q8NB49-2;Q8NB49-3;Q8NB49-4 Q8NB49 ATP11C Phospholipid-transporting ATPase IG;Phospholipid-transporting ATPase 1 GVTQEVDGLS(0.421)QT(0.502)DGT(0.068)LT(0.008)YFDKVDK 86.95299999999999 1.468e-07 4609200.0 744.53 929.7 949.38 1057.8 1501.5 1226.4 1408.7 609.79 1565.7 1660.9 1364.6 True False 870.1884619891465 977.0177589302342 1084.0163597200713 1316.961047486447 1280.6313390250218 1356.1768339815665 1664.6425554918476 696.2295999035533 1211.0714499091298 1285.7015364548524 1025.7321589559476 0.8483583695717185 0.952507679904179 1.05682204682307 1.2839229383496464 1.2485046196938254 1.3221549330791826 1.622882290427768 0.6787635483830574 1.1806897534945495 1.2534476229774423 1.0 10.00243834563431 -5.724260636877046 2.5634115904007455 1.136097235440068 0.8684611003638779 0.1778724773879481 0.22411929441851772 0.43067111310432415 5.4303942776699605 0.03126806125915911 0.16294139951070832 1.88685863256177e-06 5.724260636877046 -0.2676361350761901 GVVPLAGTNGETTTQGLDGLSER ddPTM_A549_MK2206_60min_R1 2 GVVPLAGTNGETTTQGLDGLSER 23 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 189.31 1.7369e-49 8740000.0 2022.5299999999997 2547.6 2590.0 2500.7 2936.9 1931.23 2195.41 2480.6000000000004 3543.4 3788.0 3585.6 False True 2363.8836178890174 2677.2619583206033 2957.3009455381234 3113.3716122606875 2504.885900487905 2135.5914767532763 2594.287579152664 2832.232646518894 2740.825557647068 2932.2881691197435 2695.1965624743093 0.8770728082700091 0.9933457157064488 1.0972487078356878 1.1551556779229768 0.9293889489782924 0.7923694718550357 0.9625596942625192 1.050844560264198 1.0169297467235077 1.087968206084299 1.0 11.396174778183775 -5.270225232566946 5.439959970033966 1.0038571820533735 0.872899914544892 0.14336925492143637 0.09199271367055523 0.2185017502396215 23.907409278844487 0.01240762701510904 0.10488793714908733 5.367533546785247e-06 5.270225232566946 -0.13095726750848147 GVVPLAGTNGETTTQGLDGLSER ddPTM_A549_PD325901_60min_R1 2 GVVPLAGTNGETTTQGLDGLSER 23 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 231.06 1.5194999999999998e-87 17208300.0 4463.1 4584.1 4155.1 4638.0 5522.3 5162.9 5451.1 4963.9 5238.1 5679.0 6234.6 False True 4916.190626439436 4970.4181949003505 4437.090072646083 4924.478726337755 5134.432698900768 5120.855054154039 5658.544593456374 4864.891120395782 5017.960872983427 5320.426970815797 5467.783724385667 0.899119437463082 0.9090370880495648 0.8114969970112731 0.9006352435585856 0.9390336117359228 0.9365504036517818 1.0348881518886595 0.8897372986241108 0.9177321426602734 0.9730500032558574 1.0 12.416740463610617 -6.771118193781856 2.6315430926052223 0.9583300250129003 0.8744781387685366 0.42644309805009806 0.043275709432956784 0.2208153449403645 3.1258393748636033 0.006983930404911082 0.015119809468841257 1.693876747054615e-07 6.771118193781856 -0.08385188624436368 GVVVLAK ddPTM_A549_MK2206_60min_R1 2 GVVVLAK 7 0 S4R3Z2;A0A0A0MSS8;P42330;P17516;B4DK69;P52895;Q04828;H0Y804;P42330-2 S4R3Z2;B4DK69;Q04828;P42330-2 AKR1C3;AKR1C4;AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 140.79 0.014888 48081000.0 8205.3 8317.3 8138.5 8472.2 10688.5 8967.8 9473.8 7926.7 12210.8 10784.0 10927.6 False True 9590.154039675426 8740.615043939375 9292.661677707338 10547.889380331517 9116.235808970328 9916.76664365614 11195.066829146504 9050.333999500652 9445.073296640743 8347.886910186728 8213.975333582744 1.1675411296240676 1.0641150830102288 1.131323299659106 1.2841394029035602 1.1098445562282981 1.20730416648703 1.3629291998693496 1.1018214240915072 1.1498784587317505 1.0163028949035782 1.0 13.003864899598817 -10.192655473908308 0.7077878502900357 1.0026082122886473 1.1790157263639898 0.3889919929973933 0.08119395656029255 0.5465608228081686 0.5217370268245854 0.04992486178200384 0.017289992735640358 6.417184503727494e-11 10.192655473908308 0.1764075140753425 GVVVLAK ddPTM_A549_PD325901_60min_R1 2 GVVVLAK 7 0 S4R3Z2;A0A0A0MSS8;P42330;P17516;B4DK69;P52895;Q04828;H0Y804;P42330-2 S4R3Z2;B4DK69;Q04828;P42330-2 AKR1C3;AKR1C4;AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 140.79 0.014888 95221000.0 21351.6 20718.1 23592.0 24185.0 26541.0 25531.0 24470.0 25633.0 28241.0 24793.0 25496.0 False True 23519.19871378284 22464.08699717827 25193.09499022078 25678.85252187979 24676.851721479317 25323.08400077608 25401.219240497794 25121.729706300495 27054.128980722955 23227.565748800138 22360.15363246029 1.0518352914910192 1.0046481507428957 1.1266959701765153 1.148420218571385 1.103608326091994 1.1325093922438216 1.1360037886154226 1.1235043425565385 1.2099258987848998 1.0387927619191588 1.0 14.448642480254128 -5.765237916869443 24.995569786515517 1.1122489751828215 1.028241711135517 0.2738812154809076 0.053379382528500094 120.85871564921253 795313.6551491625 0.01025386602108671 0.033753276735503525 1.716967533727901e-06 5.765237916869443 -0.08400726404730441 GVVVVIK ddPTM_A549_MK2206_60min_R1 2 GVVVVIK 7 0 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5 P46779 RPL28 60S ribosomal protein L28 0 ; 127.32 3.0964000000000004e-05 1342000.0 1351.4 1221.7 1127.8 1261.8 1528.5 1406.5 1315.2 1269.1 1905.9 1458.0 1575.4 False True 1579.4832814421634 1283.8793116973934 1287.7389986015046 1570.941056644355 1303.6596747917065 1555.3348964408615 1554.154815775451 1448.9988114557477 1474.2166930968963 1128.6367873750223 1184.1847011719183 1.3338149698092208 1.084188395971349 1.0874477582146642 1.3266013782222374 1.1008921779698309 1.3134225555368495 1.312426021242628 1.2236256810460044 1.2449212455100547 0.9530918498255184 1.0 10.209678405056982 -10.676444658398575 0.8794564732179709 0.9962180897516179 1.2220111652190884 0.5047088650242071 0.0935819023564467 0.45189291389247155 0.6057022949222588 0.06659771084742527 0.016493562028856264 2.106470306760103e-11 10.676444658398575 0.22579307546747052 GVVVVIK ddPTM_A549_PD325901_60min_R1 2 GVVVVIK 7 0 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5 P46779 RPL28 60S ribosomal protein L28 0 ; 140.79 5.4686999999999995e-09 2608700.0 1666.1 1635.7 1987.0 1644.2 1674.3 1525.4 1870.3 1612.5 1917.5 1731.9 1763.9 False True 1835.241245482005 1773.5461794896496 2121.849768801657 1745.7584997508698 1556.702944021432 1512.977648144759 1941.4752899674306 1580.337422518222 1836.9141432858694 1622.5475384320966 1546.9514822833667 1.1863599256345845 1.1464782184841502 1.371633042860346 1.1285153540653101 1.0063036635923912 0.9780382031836831 1.2550330842320472 1.021581762981717 1.1874413414533889 1.0488677615390671 1.0 10.59521223428237 -14.999999999999998 0.26396261374870117 0.009689368394556513 1.1604344520056082 0.15464891897251853 0.10860991500018392 56.47423076457363 0.7360253909463124 29.53940428276738 0.051132359531433524 1.000000000000004e-15 14.999999999999998 1.1507450836110518 GVYSSTNELTTDST(ph)PKK ddPTM_A549_MK2206_60min_R1 1 GVYSSTNELTTDSTPKK 17 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 GVYSSTNELT(0.003)T(0.055)DS(0.238)T(0.704)PKK 72.793 0.00042942 6908900.0 3141.1 3617.5 3098.3 2927.0 3809.7 3492.4 3233.6 3376.7 4928.6 4941.2 5049.5 True False 3671.2408874781545 3801.6152984082173 3537.6855287879416 3644.115131398025 3249.298176679075 3861.9634499325034 3821.103263603637 3855.3575657100473 3812.2799693569273 3824.9794881875605 3795.56979088968 0.9672436787462199 1.0015927799649602 0.9320565089540113 0.9600969899551882 0.8560765196514647 1.017492408966418 1.0067271777679452 1.0157519893228872 1.004402548072586 1.007748427487349 1.0 11.8901007639223 GWDS(ph)SHEDDLPVYLAR ddPTM_A549_MK2206_60min_R1 1 GWDSSHEDDLPVYLAR 16 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GWDS(0.874)S(0.126)HEDDLPVYLAR 133.86 9.365200000000001e-11 2152600.0 276.61 445.86 308.46 307.22 526.9 315.0 332.89 280.65 398.48 335.79 600.65 True False 323.2950055347909 468.5523695779649 352.20426627825844 382.48891379163007 449.39370798020923 348.33309091992294 393.3718040020452 320.43299695457847 308.2249162418025 259.93480578371657 451.4920279033339 0.7160591672817079 1.037786584524774 0.780089668280182 0.8471664839085982 0.9953524762488742 0.7715154850851593 0.8712707638024287 0.7097201659188196 0.6826807500304182 0.5757240210659258 1.0 8.818556703713714 -4.03412151491644 19.172852753601152 0.8454157056002262 0.5963994029791124 0.0 0.1440160474946198 0.0 0.0 0.01795376492369555 0.0 9.244394810287724e-05 4.03412151491644 -0.24901630262111374 GWDS(ph)SHEDDLPVYLAR ddPTM_A549_PD325901_60min_R1 1 GWDSSHEDDLPVYLAR 16 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GWDS(0.882)S(0.118)HEDDLPVYLAR 153.72 2.2052999999999998e-16 3036400.0 569.4 357.87 446.59 515.09 497.22 391.82 353.8 370.59 404.89 348.29 632.69 True False 627.2050688298744 388.02896084487423 476.8982829638308 546.9059394457335 462.29698251587934 388.62914782750687 367.2640526067886 363.19829172776923 387.87388134290296 326.2989099604569 554.8731409523572 1.1303575944464896 0.6993111257446707 0.8594726393591621 0.9856413999550434 0.8331579750326631 0.7003927909728749 0.6618883227550616 0.6545609526249431 0.6990316393350292 0.5880603797120426 1.0 9.11601415972598 -5.246626640912008 23.97709269116773 0.8197024893249637 1.1303579866013216 0.3052855186228083 0.13847582361321498 1613.7531687442643 2612074.4590435554 0.020502669684723484 0.6063027738874541 5.6672628920357046e-06 5.246626640912008 0.3106554972763579 GWDSS(ph)HEDDLPVYLAR ddPTM_A549_MK2206_60min_R1 1 GWDSSHEDDLPVYLAR 16 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GWDS(0.466)S(0.534)HEDDLPVYLAR 70.335 0.00044099 2364200.0 400.6 381.12 295.38 112.42 294.35 433.67 232.96 223.69 483.38 356.6 257.12 True False 468.2114862703348 400.5173801048627 337.26932559577244 139.9629050467256 251.05150492308715 479.560671553152 275.28581651691724 255.39874252189435 373.89520179924324 276.043812330544 193.27000784900565 2.4225770541497065 2.072320400678885 1.745068101095478 0.7241832636343306 1.2989677380218452 2.4812989707529485 1.424358696834055 1.3214608172491382 1.934574360297812 1.4282806494539302 1.0 7.594473963461114 -10.915901329984449 1.0308052044370737 0.9768818315274066 1.7069932802443788 0.10696038922944406 0.5064367771231877 0.7456764742747389 1.3310422090632488 0.41690550422962075 0.08665025516992568 1.213664559006768e-11 10.915901329984449 0.7301114487169722 GWDSS(ph)HEDDLPVYLAR ddPTM_A549_PD325901_60min_R1 1 GWDSSHEDDLPVYLAR 16 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GWDS(0.422)S(0.578)HEDDLPVYLAR 182.18 1.7289999999999999e-34 2918400.0 448.23 544.5 542.16 530.19 349.9 317.59 339.55 406.24 428.25 429.68 578.0 True False 493.73397963051434 590.3869259229161 578.9542378729269 562.9386321511454 325.32423108946955 315.00365233662893 352.47176105888957 398.137224510885 410.2521417794912 402.5499314703523 506.9096642438832 0.9740078251752766 1.1646787732949406 1.1421250741717597 1.1105304788198034 0.6417795004455672 0.6214197016868771 0.6953344667134008 0.7854204656065389 0.8093200242915701 0.7941255806807392 1.0 8.985584858976953 -6.727090502953288 24.960163147441694 0.8442653350737697 1.1057738803587547 0.5888137041230302 0.12301826094752585 145.5894201331432 105794.22046286821 0.02205719944669829 0.04591391220236861 1.8746038172631372e-07 6.727090502953288 0.261508545284985 GWGS(ph)PGRPK ddPTM_A549_MK2206_60min_R1 2 GWGSPGRPK 9 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2;S4R3B3;H7C453;S4R3U7 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 GWGS(1)PGRPK;GWGS(1)PGRPK 81.525 0.00044227 42924000.0 12631.900000000001 11138.599999999999 7622.4 7981.099999999999 16411.2 12296.2 12217.599999999999 11501.0 18318.8 19678.0 18349.8 True False 14763.85589969606 11705.507163192744 8703.370937169802 9936.469858285194 13997.13421978519 13597.375722443037 14437.379772824032 13131.30197033532 14169.621049112462 15232.726133035454 13793.038231283781 1.070384613754668 0.8486532819610157 0.6309973764467511 0.720397470931998 1.0147970291301376 0.9858144010362442 1.0467149826409405 0.9520238942390816 1.0273023833845802 1.1043778663997565 1.0 13.751652657896361 -6.776057990154361 24.952068408111998 1.0091163097853904 0.8064963569176052 0.45014612848575963 0.10632891066359318 150.4191096750233 256745.81450929298 0.01469156413061745 0.02784951056117844 1.6747192404162753e-07 6.776057990154361 -0.2026199528677851 GWGS(ph)PGRPK ddPTM_A549_PD325901_60min_R1 1 GWGSPGRPK 9 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2;S4R3B3;H7C453;S4R3U7 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 GWGS(1)PGRPK 61.343999999999994 0.0021401999999999997 37051000.0 3803.4 3457.0 3066.9 3462.7 3734.6 3610.9 3112.5 2505.1 4907.4 4351.3 5016.7 True False 4189.518368084908 3748.333522342557 3275.0382767678925 3676.5831146377177 3472.294579670572 3581.494027590079 3230.947890725351 2455.133815287067 4701.159043943196 4076.558175402498 4399.6777034814695 0.9522330157888014 0.8519563874818596 0.7443814064326465 0.835648282084034 0.7892156684392909 0.8140355428207933 0.7343601300996886 0.558025832970519 1.0685235057611524 0.9265583640766943 1.0 12.103182128271259 -8.798261526765465 24.999990518549474 1.0323584071465983 0.78697204379356 0.47674838103136497 0.09778833604462941 83.20235451145176 56488.95528798808 0.01623738085960441 0.017286237211654024 1.5912502072821883e-09 8.798261526765465 -0.24538636335303832 GWLRDPS(ph)ASPGDAGEQAIR ddPTM_A549_MK2206_60min_R1 1 GWLRDPSASPGDAGEQAIR 19 1 P18206;P18206-2 P18206 VCL Vinculin 1 GWLRDPS(0.923)AS(0.077)PGDAGEQAIR 107.98 3.0608999999999997e-10 9959200.0 2325.3 2383.4 2495.3 2238.9 2966.3 2761.6 2404.7 2715.8 3451.3 3512.6 3947.2 True False 2717.7537918732132 2504.704879675508 2849.171061544895 2787.4306005080407 2529.9611994338484 3053.8306789982803 2841.602863059026 3100.7729667886842 2669.5860605935886 2719.1012203933506 2967.0013028220105 0.9159934609021809 0.8441873204751216 0.9602864207828142 0.9394773766552869 0.8526997264974305 1.0292650279909494 0.9577356303673631 1.045086486426359 0.8997589782163086 0.9164475990647951 1.0 11.534789844973506 -7.253815293105796 24.997930611107105 0.9644738576472517 0.9045491160099265 0.3164980916003922 0.05159972928913157 722.4937854957994 2368916.9374397285 0.008145237193666484 0.01392864216604144 5.574227722924422e-08 7.253815293105796 -0.059924741637325196 GWLRDPSAS(ph)PGDAGEQAIR ddPTM_A549_MK2206_60min_R1 4 GWLRDPSASPGDAGEQAIR 19 1 P18206;P18206-2 P18206 VCL Vinculin 1 GWLRDPS(0.022)AS(0.978)PGDAGEQAIR;GWLRDPS(0.005)AS(0.995)PGDAGEQAIR;GWLRDPS(0.024)AS(0.976)PGDAGEQAIR;GWLRDPS(0.032)AS(0.968)PGDAGEQAIR 93.404 1.0028e-06 61379000.0 5615.6 6643.799999999999 5691.4 5429.5 8955.2 6435.5 5595.67 5785.4 9519.0 9922.0 10331.4 True False 6563.37599176159 6981.941042035801 6498.526100940411 6759.727743739517 7637.90194288171 7116.500338460831 6612.330807474316 6605.49816704442 7362.961698719427 7680.613308871727 7765.82824786565 0.8451611061016524 0.8990594202176321 0.836810433288485 0.8704451769967165 0.9835270236604706 0.9163865219935453 0.8514649817669662 0.8505851476769225 0.9481231703447798 0.9890269348903842 1.0 12.922924085046189 -9.060818919863637 2.2413278907782557 0.9811823729171559 0.8842264143097562 0.5263992340990581 0.041193555567071605 0.17251742867509043 1.7720079650489617 0.008589903331119943 0.008416961609115777 8.693228199870496e-10 9.060818919863637 -0.0969559586073997 GWLRDPSAS(ph)PGDAGEQAIR ddPTM_A549_PD325901_60min_R1 2 GWLRDPSASPGDAGEQAIR 19 1 P18206;P18206-2 P18206 VCL Vinculin 1 GWLRDPS(0.009)AS(0.991)PGDAGEQAIR;GWLRDPS(0.001)AS(0.999)PGDAGEQAIR 201.58 2.9686e-55 125319000.0 13370.6 11738.2 11164.4 12341.0 11542.3 12667.2 10666.2 10159.2 14562.5 13967.599999999999 16806.1 True False 14727.973469084518 12727.419309216479 11922.083320991045 13103.275541555453 10731.60866677332 12564.04252299677 11072.108077768591 9956.566786261783 13950.488767457875 13085.683352274473 14739.056242645542 0.9992480676253235 0.8635165711893646 0.8088769813155369 0.8890172698875272 0.7281069079391126 0.8524319546759275 0.7512087541760568 0.6755226808520991 0.9464981025782336 0.8878236935152436 1.0 13.84735652965102 -8.96287593528254 16.910635466781127 0.9763999913907949 0.8193393694622411 0.27522647024029445 0.0865655101189775 3.773421010492142 1718.7651433158674 0.014370922027108386 0.015209656702125754 1.089241211960303e-09 8.96287593528254 -0.15706062192855386 GWNGS(ph)LR ddPTM_A549_MK2206_60min_R1 1 GWNGSLR 7 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 GWNGS(1)LR 67.494 0.022101 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GWS(ph)QEGPVK ddPTM_A549_MK2206_60min_R1 2 GWSQEGPVK 9 0 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWS(1)QEGPVK;GWS(1)QEGPVK 100.88 0.00075677 5849400.0 4822.0 5509.2 3384.8 4582.4 6513.200000000001 4932.5 4458.1 4058.3 6795.700000000001 6641.6 6553.0 True False 5635.835713418759 5789.594748304228 3864.815536856155 5705.088205711755 5555.11690798387 5454.453876071487 5268.0790634189025 4633.576453022505 5256.484800502955 5141.257947208473 4925.709246400648 1.1441673536733863 1.1753829669371665 0.7846211263241497 1.1582267487429594 1.127780108426649 1.1073438571424423 1.0695067044950803 0.9406922376525548 1.0671528784091375 1.0437599318240987 1.0 12.266115755950887 -10.631364323333605 0.009403121346755947 5.814122837351727e-05 2.051314026901894 0.04702028235237665 0.10645051372959129 8442.582657941372 18.839831367744047 2145.4330469404667 1966.0903347602875 2.3368760447903436e-11 10.631364323333605 2.0512558856735206 GWSQEGPVKS(ph)PAECR ddPTM_A549_MK2206_60min_R1 1 GWSQEGPVKSPAECR 15 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWS(0.011)QEGPVKS(0.989)PAECR 50.358000000000004 0.006546 8411800.0 2111.5 1725.4 1472.9 1370.7 2282.6 1778.6 1835.2 1953.0 2330.5 2233.9 2142.2 True False 2467.8695787813576 1813.215490220743 1681.7793678313137 1706.5215615330617 1946.8325637419355 1966.8102714608729 2168.6320847864267 2229.843730811656 1802.645471043769 1729.2604384890692 1610.2326182877248 1.5326168099896147 1.1260581046661844 1.0444325551047833 1.0597981572052166 1.2090380865667356 1.2214448081124591 1.3467818625438652 1.3847960260442418 1.1194938237933911 1.0739196429444555 1.0 10.653053403441941 -9.22782565903331 2.1318817026440167 1.0402280078330473 1.22535349394912 0.23306765501451954 0.13921269948964576 0.29748665090903326 2.79212180064133 0.029383324087030666 0.027065033042140443 5.917991553388922e-10 9.22782565903331 0.1851254861160727 GWSQEGPVKS(ph)PAECREEHSK ddPTM_A549_MK2206_60min_R1 2 GWSQEGPVKSPAECREEHSK 20 2 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWS(0.041)QEGPVKS(0.958)PAECREEHS(0.001)K;GWSQEGPVKS(1)PAECREEHSK 75.226 7.5325e-05 19599100.0 3692.8999999999996 3321.4 2128.4 2276.1800000000003 3985.3 3504.0 2473.4 3038.3 4485.3 4362.9 4215.1 True False 4316.171237263401 3490.445073153574 2430.2391245109425 2833.8442021816045 3399.0676492949874 3874.7909542330463 2922.7847637918203 3468.988329403513 3469.3867115522917 3377.317859834353 3168.3743391581497 1.3622668205330264 1.1016517303574047 0.7670303014626318 0.894415841953375 1.0728112544296562 1.2229586972550075 0.9224871971941347 1.0948795685314248 1.0950053056149047 1.0659466017300596 1.0 11.629527082624527 -5.307669906154277 4.197698272377922 1.0283706844238156 1.3761342688712006 0.4187130660301387 0.11670124276642764 0.14642483692866445 5.092217771944635 0.01607445496640431 0.13484584272070566 4.924136619250818e-06 5.307669906154277 0.347763584447385 GWSQEGPVKS(ph)PAECREEHSK ddPTM_A549_PD325901_60min_R1 2 GWSQEGPVKSPAECREEHSK 20 2 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWSQEGPVKS(0.994)PAECREEHS(0.006)K;GWS(0.001)QEGPVKS(0.994)PAECREEHS(0.004)K 72.532 0.00014161 12113000.0 2340.2 2107.12 2365.6 2504.3 2320.94 2427.96 2237.41 2339.0 2453.0 2640.3 3511.5 True False 2577.775381235815 2284.6943973382836 2526.1438415084035 2658.984923322043 2157.9251812083276 2408.187498747572 2322.5558619077296 2292.3468100899977 2349.9089405372815 2473.591007403584 3079.607761232519 0.837046656943136 0.7418783736354478 0.8202810349125084 0.8634167496245904 0.700714294973943 0.781978643209994 0.7541726226128868 0.74436323967847 0.7630546234228226 0.8032162532327185 1.0 11.588530896309443 -10.637937515697457 0.8256140068588298 1.0058036284269438 0.7768766743405643 0.12848943589361317 0.07227258504863866 0.24171734870766834 0.2824252954931342 0.03474394783993573 0.008489558528126651 2.3017729621460593e-11 10.637937515697457 -0.22892695408637953 GWSQEGPVKS(ph)PAECREEHSKTPEER ddPTM_A549_PD325901_60min_R1 2 GWSQEGPVKSPAECREEHSKTPEER 25 3 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWS(0.154)QEGPVKS(0.799)PAECREEHS(0.023)KT(0.023)PEER;GWSQEGPVKS(0.904)PAECREEHS(0.048)KT(0.048)PEER 54.466 0.0011887 22273000.0 2803.3999999999996 3209.7 3179.1000000000004 2698.7 2782.8 3448.0 3108.8 3034.2 3589.8 3579.2 4454.0 True False 3087.999104245997 3480.1926834431283 3394.852843481302 2865.3925698076087 2587.3457281388282 3419.9206311807584 3227.107085200637 2973.6805007161474 3438.9331898657706 3353.2087011699064 3906.1862362322768 0.7905406750970828 0.890943870305569 0.8690965146494953 0.7335524720325243 0.6623713186380125 0.8755139730560959 0.8261528995384901 0.7612746348685155 0.8803812675308599 0.8584354401914676 1.0 11.931545019264064 -9.60816297197828 0.7144311397726951 0.9880586295909334 0.800242839538915 0.23559070510484825 0.07605003523562213 0.34279903242076604 0.37639664537637807 0.027720278829620828 0.01592365235464612 2.4651141126954717e-10 9.60816297197828 -0.18781579005201843 GYADS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 GYADSPSK 8 0 Q01518-2;Q01518;Q5T0R8;Q5T0S3;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 1 GYADS(0.995)PS(0.005)K;GYADS(0.913)PS(0.087)K 110.31 0.0016045000000000002 517260000.0 16766.7 19942.4 18367.7 17529.1 25439.2 20436.2 21048.1 19574.9 27726.6 30140.4 29050.9 True False 19596.50905354174 20957.38297912262 20972.516053034964 21823.73028691121 21697.127379104477 22598.745119548334 24872.267318980586 22349.702020617056 21446.56937028198 23331.662706583076 21836.759765948504 0.8974091973159803 0.9597295204851246 0.9604225296162661 0.9994033236076714 0.9936056270096553 1.0348946163151935 1.139009064786505 1.0234898519819968 0.9821314883779153 1.0684580934468892 1.0 14.414471178279548 -5.474022592908874 1.0224527330122726 1.0082244027189413 0.8714241816521374 0.4104938878471365 0.04603339277131319 1.2360576641259202 1.2579679299355095 0.007155476334449412 0.1688800204247488 3.357201489231262e-06 5.474022592908874 -0.1368002210668039 GYADS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 GYADSPSK 8 0 Q01518-2;Q01518;Q5T0R8;Q5T0S3;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 1 GYADS(0.998)PS(0.002)K;GYADS(0.985)PS(0.015)K 140.05 0.0010927999999999999 1084630000.0 30997.0 31478.0 30841.0 28644.0 35339.0 30401.0 32086.0 30905.0 29447.0 27980.0 30609.0 True False 34143.792621214634 34130.76153205062 32934.05572199893 30413.274824756056 32856.910552931615 30153.424335419433 33307.05028813291 30288.575530496524 28209.444994700923 26213.33802490333 26844.287046437752 1.2719202622945254 1.271434829802261 1.226855295692023 1.1329514832017828 1.2239814935704072 1.1232715655013383 1.2407500422907587 1.128306200797977 1.0508546919462451 0.9764959665182037 1.0 14.712327468626428 -8.237725874060532 0.35837772051150635 0.9856588030995264 1.2710223362048798 0.8013704020834852 0.045198459549780336 0.3733963122562173 0.12520653396759318 0.025509099078667948 0.037068218688093985 5.784610558333622e-09 8.237725874060532 0.28536353310535345 GYCPAKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 GYCPAKSPK 9 1 A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2;E7ETI4;E7EMC5 A0A669KBI3 AFF1 AF4/FMR2 family member 1 1 GYCPAKS(1)PK;GYCPAKS(1)PK 76.143 0.00056223 27524000.0 7873.200000000001 7678.5 7395.2 6952.8 10286.5 8633.4 7837.4 8117.4 11305.5 10196.5 10701.0 True False 9202.003678740884 8069.302852474779 8443.950560789004 8656.236312123056 8773.36947644415 9546.980657612889 9261.354131051185 9268.066308494908 8744.822301173712 7893.103568223195 8043.64636742459 1.1440089803061764 1.0031896585053879 1.0497665082574463 1.0761582392755793 1.090720436439724 1.1868971137613096 1.151387530978252 1.1522220004634978 1.0871714023367272 0.9812842593613926 1.0 12.973633940748714 -10.165828866431903 0.9328013212367359 1.0074050578926672 1.1027967055554118 0.415812169237583 0.05091343354621087 0.45390143139943817 0.7837067837930595 0.023585261580065197 0.010483312370639713 6.826076224151379e-11 10.165828866431903 0.09539164766274455 GYCPAKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 GYCPAKSPK 9 1 A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2;E7ETI4;E7EMC5 A0A669KBI3 AFF1 AF4/FMR2 family member 1 1 GYCPAKS(1)PK;GYCPAKS(1)PK 66.595 0.0014769 47586000.0 7956.1 7811.200000000001 8831.599999999999 7100.6 7540.8 7010.6 7912.4 7946.5 6268.1 7670.2 8104.3 True False 8763.797415028745 8469.477237408784 9430.965484725073 7539.187935367369 7011.160222347736 6953.5079979570255 8213.510711831415 7788.000823591344 6004.673554904913 7185.9022629954825 7107.522477390495 1.2330312627089075 1.191621590272948 1.3268991430875676 1.0607336043396318 0.9864422159269571 0.9783307784219607 1.15560812335932 1.095740583074552 0.844833565283287 1.0110277225086968 1.0 12.795131041064858 -6.563214358243633 0.5386307124723386 0.9394585973923582 1.3041284997847575 0.4675750607313689 0.09557474114307997 0.8343427711423745 0.34418137410078314 0.022580898154949295 0.14907814041388928 2.7339189907031416e-07 6.563214358243633 0.3646699023923994 GYDVIAQAQSGTGK ddPTM_A549_MK2206_60min_R1 2 GYDVIAQAQSGTGK 14 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;Q14240-2;Q14240;E7EQG2;J3QR64;J3KS25;J3QLN6;J3QKZ9;J3KS93;J3KSN7;E7EMV8;J3KT04 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 176.05 1.9549999999999998e-22 6427600.0 3859.3 5057.1 4472.299999999999 4451.2 5243.0 4686.8 4965.7 4294.0 5927.5 7019.0 6381.3 False True 4510.655489173995 5314.4847893794595 5106.539389471095 5541.744199821964 4471.761645360104 5182.7540651539475 5867.903412938075 4902.687649823479 4584.930714272447 5433.403025092786 4796.647095079576 0.9403767673050302 1.107958264186474 1.0646060233844197 1.1553370698266947 0.9322682191790301 1.0804951797413744 1.223334403516448 1.022107224617938 0.9558615890203163 1.1327502143458497 1.0 12.227810584341686 -8.519059133726246 24.99330910998972 0.9796740938012829 1.07497264731572 0.0 0.09174507593344194 170.4908786813927 1115598.659306305 0.01282539358226126 0.01470653288527178 3.0265013103052475e-09 8.519059133726246 0.09529855351443706 GYDVIAQAQSGTGK ddPTM_A549_PD325901_60min_R1 2 GYDVIAQAQSGTGK 14 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;Q14240-2;Q14240;E7EQG2;J3QR64;J3KS25;J3QLN6;J3QKZ9;J3KS93;J3KSN7;E7EMV8;J3KT04 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 173.06 3.1638999999999998e-22 9707000.0 12021.599999999999 11797.3 12459.0 13359.6 15083.0 14506.8 13024.0 14230.8 14413.0 14371.300000000001 14708.1 False True 13242.023982165823 12791.499873627945 13304.542662053265 14184.792150147003 14023.622113525214 14388.661430514214 13519.635447006265 13946.955530153364 13807.271732557621 13463.893665378597 12899.096942327782 1.0265853525538475 0.9916585580230224 1.0314321011415173 1.0996732727544882 1.0871785967827992 1.115478199353514 1.0481071277666125 1.0812350347090642 1.0704060752694793 1.0437857569081026 1.0 13.65498244656002 -3.922263038895875 12.325127715864744 1.0465590020310673 0.839475614306955 0.0 0.03909394273511971 0.0 0.0 0.006017783855995556 0.0 0.00011960159215983292 3.922263038895875 -0.20708338772411228 GYEEVHVPALKPKPFGS(ph)EEQLLPVEK ddPTM_A549_PD325901_60min_R1 1 GYEEVHVPALKPKPFGSEEQLLPVEK 26 2 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 1 GYEEVHVPALKPKPFGS(1)EEQLLPVEK 47.104 0.002991 1754700.0 820.36 1139.3 1471.2 1125.8 1366.1 1045.8 1283.9 1225.0 1272.7 1423.8 1076.3 True False 903.6423432828867 1235.3128093736982 1571.0444790442873 1195.3381091226918 1270.1498487891524 1037.2833515338855 1332.7595170770376 1200.5664140060906 1219.2128449334684 1333.901025012772 943.9219232278407 0.9573274240657387 1.308702318460213 1.6643796911421813 1.2663527350176451 1.345609014404222 1.0989079986475847 1.411938301548846 1.2718916516957535 1.2916458606705958 1.4131476260783906 1.0 9.882523721363494 -10.639088796478793 0.5821368963639183 0.9586103778545625 1.3074024015996568 0.0 0.20748737186893973 1.1111386542822215 0.5546189282844842 0.20464243710619248 0.03628915143443036 2.2956792222254574e-11 10.639088796478793 0.3487920237450943 GYES(ph)PTLSK ddPTM_A549_MK2206_60min_R1 2 GYESPTLSK 9 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 GYES(0.493)PT(0.493)LS(0.014)K;GYES(0.949)PT(0.051)LS(0.001)K 147.3 2.8471999999999998e-05 33402000.0 12528.6 13029.4 11883.5 10570.7 16574.3 13373.5 11696.0 12463.9 17480.3 17485.9 18975.1 True False 14643.121385138587 13692.540806932979 13568.758990850296 13160.521974536763 14136.24242584245 14788.674893389174 13821.011804523783 14230.695994092894 13521.039960303102 13535.823045515037 14263.058983881712 1.0266466262031428 0.960000293233488 0.9513218031408252 0.922699821224122 0.991108740545589 1.0368515554833957 0.9690075474091866 0.9977309923610783 0.947976165251988 0.949012624908268 1.0 13.799995807866821 GYES(ph)PTLSK ddPTM_A549_PD325901_60min_R1 2 GYESPTLSK 9 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 GYES(0.909)PT(0.09)LS(0.001)K;GYES(0.84)PT(0.158)LS(0.002)K 141.88 3.8636999999999996e-05 51797000.0 16562.0 16788.0 16544.5 16503.8 19546.6 16822.5 17075.7 16939.9 18013.1 18014.300000000003 19658.1 True False 18243.362047700008 18202.78367749113 17667.30926016055 17523.202243150703 18173.714248109263 16685.5031374821 17725.525107681577 16602.02040540554 17256.072049242608 16876.874023660326 17240.27832296312 1.0581825714148032 1.0558288756421064 1.0247693760621397 1.016410635309219 1.0541427410660102 0.9678209843780718 1.028146110847418 0.9629786767010915 1.0009160946235103 0.9789212046061484 1.0 14.073495444690932 -6.166614713883511 0.6449901922404679 0.9978162341611897 1.0686131611489316 0.5173497757668091 0.022913023828377052 0.831407216105318 0.435418393563229 0.003592444780078617 0.034713343826325 6.8137357397632e-07 6.166614713883511 0.07079692698774187 GYESPT(ph)LSKDYEGYPAPAMPDFQPGDTTVR ddPTM_A549_MK2206_60min_R1 2 GYESPTLSKDYEGYPAPAMPDFQPGDTTVR 30 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 GY(0.008)ES(0.3)PT(0.338)LS(0.338)KDY(0.007)EGY(0.008)PAPAMPDFQPGDTTVR;GY(0.045)ES(0.271)PT(0.299)LS(0.299)KDY(0.043)EGY(0.043)PAPAMPDFQPGDTTVR 59.693999999999996 0.00054905 6965100.0 1071.94 1412.26 1076.48 504.18 1318.4 897.39 835.5 887.97 1636.05 1552.84 1826.47 True False 1252.857265583182 1484.138001749824 1229.1410509084478 627.7041226335003 1124.4651064739198 992.3512141607283 987.2995351128267 1013.8424667940745 1265.4872872349956 1202.0523655057825 1372.907090992429 0.9125579391374059 1.0810185273913837 0.8952834893000243 0.45720801265565164 0.8190394775083297 0.7228101746079486 0.719130625510238 0.7384640034608616 0.9217574120913141 0.8755525944853696 1.0 10.423018281669453 -8.931515758214717 3.7345202983235595 0.9675803417892938 0.7912810330567837 0.13980371348699738 0.1492151814490393 0.26619275153746 7.016797645402576 0.028145947610482495 0.02925495055348912 1.1708041193548832e-09 8.931515758214717 -0.1762993087325101 GYESPT(ph)LSKDYEGYPAPAMPDFQPGDTTVR ddPTM_A549_PD325901_60min_R1 1 GYESPTLSKDYEGYPAPAMPDFQPGDTTVR 30 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 GYES(0.098)PT(0.767)LS(0.135)KDYEGYPAPAMPDFQPGDTTVR 118.8 4.5441999999999995e-21 13986000.0 1427.5 1617.4 1983.4 1692.7 1988.3 1748.7 1562.6 2352.8 2010.5 1789.1 2091.9 True False 1572.4187491300424 1753.7039742657946 2118.005451153098 1797.254234599378 1848.6486672626256 1734.459166979638 1622.0655980875295 2305.8715582641053 1926.005676702082 1676.1359206702843 1834.6095616466785 0.857086315258652 0.9559003784389601 1.154472044314461 0.9796385411761553 1.0076523669719382 0.945410513080969 0.8841475766819958 1.2568731824304018 1.0498177470378873 0.9136199634574269 1.0 10.841257348596868 GYFEHREDR ddPTM_A549_MK2206_60min_R1 1 GYFEHREDR 9 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0;M0QZV6 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 0 64.04 0.023009 4252300.0 163.17 244.78 307.66 186.17 228.05 130.41 177.09 138.27 293.85 196.46 221.87 False True 190.70910687651147 257.2382564600869 351.29081424874886 231.78165835748882 194.50414709600832 144.209899640848 209.26496070991087 157.87019593411569 227.2934441820258 152.07954955260428 166.77355569951345 1.1435212619686794 1.542440319036967 2.106393982998671 1.3897986247598186 1.1662769093108434 0.8647048330652622 1.2547850277112091 0.9466140796239931 1.3628865993092747 0.9118924694908808 1.0 7.38174673703628 -6.590931705404328 4.393395983396606 1.1415006108904224 1.6141322790966341 0.43725144607856503 0.25655292461088297 0.1588357900412373 6.03123250862864 0.03659810038693525 0.07918777060554016 2.564887343902858e-07 6.590931705404328 0.4726316682062117 GYFEHREDR ddPTM_A549_PD325901_60min_R1 2 GYFEHREDR 9 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0;M0QZV6 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 0 ; 63.534 0.023826 3518800.0 340.98 371.61 351.42 371.28999999999996 343.78 279.47 450.72 250.41899999999998 279.46999999999997 406.32 201.52 False True 375.59603858379126 402.9268788654086 375.26947446012997 394.2237400392291 319.63407877661575 277.19408897798314 467.87239624344795 245.42419659509483 267.72484778310405 380.6648858569949 176.7343175405318 2.125201510440399 2.279845162346596 2.123353741833793 2.2306009694400117 1.808556952745251 1.5684225499352278 2.6473205812795655 1.388661806096656 1.5148435884372298 2.153882116130016 1.0 7.465438393435791 -8.978856501220026 0.35046443397314153 0.9259488693495923 2.2540259794453044 0.030986606843360076 0.45158230395112914 0.4996409299909964 0.1721803298693145 0.234515466823903 0.17748800557383906 1.0498892738204702e-09 8.978856501220026 1.328077110095712 GYFEYIEENK ddPTM_A549_MK2206_60min_R1 2 GYFEYIEENK 10 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 172.47 4.2385e-10 5004800.0 4044.7 4739.3 4443.4 3949.3 5437.9 5415.8 4788.4 4583.1 6447.4 6549.4 6415.1 False True 4727.346476579185 4980.510126813013 5073.540934905057 4916.878677290813 4637.992113542572 5988.896361282917 5658.390297946453 5232.768460155095 4987.074194382149 5069.885991244152 4822.053622247028 0.9803595826411174 1.0328607927201243 1.0521535703165488 1.0196648694668804 0.9618292281414562 1.2419804569680732 1.1734399368436927 1.0851742577090377 1.0342220524827392 1.0513956061902183 1.0 12.235431978762985 -3.5625895958025353 16.64622697110689 1.0415516085787309 0.5042994879738485 0.0 0.08096769051251426 0.0 0.0 0.011162806373379325 0.0 0.0002737854751198637 3.5625895958025353 -0.5372521206048824 GYFEYIEENK ddPTM_A549_PD325901_60min_R1 1 GYFEYIEENK 10 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 148.96 8.652799999999999e-08 2740200.0 4299.4 3905.3 4197.8 3831.5 4328.1 3507.4 4033.3 4180.2 4137.6 4343.6 4499.3 False True 4735.871922949005 4234.4133366515425 4482.68795142204 4068.1630530321477 4024.1091871344197 3478.836897274764 4186.789438606447 4096.82263169654 3963.711060891585 4069.3443547165884 3945.9146234126356 1.2001962472399297 1.0731132679676172 1.1360326766383948 1.0309810123346728 1.0198165878343706 0.8816300476025206 1.0610441021112338 1.0382441138965626 1.004510091874101 1.0312803856858932 1.0 11.946144025895451 -6.339299542827093 2.1950169260925136 1.001184675822849 1.1358700368909995 0.5560369094794464 0.05114417270246943 0.16796355362745907 1.5608814151681316 0.006800849215288688 0.019987188933960932 4.578260047354993e-07 6.339299542827093 0.13468536106815043 GYFVQPTVFSNVTDEMR ddPTM_A549_MK2206_60min_R1 1 GYFVQPTVFSNVTDEMR 17 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 46.132 0.018112 46551000.0 11947.0 14988.0 16467.0 13222.0 19360.0 13152.0 13731.0 11595.0 23125.0 23080.0 25578.0 False True 13963.361523893374 15750.825181075983 18802.268212423274 16461.390593558135 16512.169646036917 14543.73591040897 16225.744963057123 13238.626758198241 17887.224423036758 17866.211970243854 19226.27668311242 0.7262644636836119 0.8192342927692737 0.9779464075297752 0.8561923280765615 0.8588334558058521 0.7564509837301777 0.8439358920341117 0.6885694498418673 0.9303530120706194 0.9292601092096426 1.0 14.230791780245838 -8.961750079194687 11.225333691678332 0.9693385566145838 0.8222682966764546 0.40437668461446186 0.0745738967653305 0.39789141111575754 115.20349187821131 0.013253042989514184 0.013971772355974398 1.0920686017386924e-09 8.961750079194687 -0.14707025993812917 GYGFGLIK ddPTM_A549_MK2206_60min_R1 2 GYGFGLIK 8 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 ; 119.7 0.0033702 4909300.0 2697.86 3199.1000000000004 2751.1 2577.1 3245.1000000000004 2922.9 2780.3999999999996 2210.1000000000004 3668.1000000000004 3702.9 4045.1 False True 3153.1928116557306 3361.92052553911 3141.2473479806686 3208.489615690417 2767.7500887579768 3232.199337936006 3285.562689919454 2523.3884431473844 2837.281206752049 2866.4123182242597 3040.5900309194635 1.037033200658826 1.1056803092005394 1.033104534329729 1.0552194090829736 0.9102674351402181 1.0630171463657008 1.0805674742431197 0.8299009131409671 0.9331350750676721 0.9427158180076868 1.0 11.570135592569262 -6.632744458948203 0.7185036249794348 0.9645309803721984 1.0788376776271782 0.27164394966831484 0.06898762121965636 0.9687483571534357 0.8266132791985031 0.012467048444086677 0.06204014659240459 2.3294615213354003e-07 6.632744458948203 0.11430669725497977 GYGFGLIK ddPTM_A549_PD325901_60min_R1 2 GYGFGLIK 8 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 ; 146.21 0.0023055999999999997 8058700.0 5075.4 5135.4 5929.1 5392.0 6053.1 6409.6 6293.200000000001 6038.200000000001 7355.5 6570.4 6184.0 False True 5590.650871687997 5568.178180687869 6331.484380574688 5725.05159387951 5627.951138061358 6357.4023426961085 6532.691169771175 5917.76336412374 7046.373914440271 6155.54382268852 5423.407203605842 1.0308373798616781 1.0266937317533105 1.1674366579675401 1.0556189824863444 1.037715024296815 1.172215565607776 1.2045363596205365 1.0911523221397088 1.299252232020375 1.1349956939607826 1.0 12.404983780401123 -7.2634355071917165 24.92644785632829 1.1476237835955438 1.0669252609117723 0.23617818176816852 0.07744838987551857 312.99587395932264 3908515.3831615355 0.016655907510733953 0.02741884766816886 5.4521085358695874e-08 7.2634355071917165 -0.08069852268377153 GYGYGQGAGTLSTDKGESLGIK ddPTM_A549_MK2206_60min_R1 1 GYGYGQGAGTLSTDKGESLGIK 22 1 E9PP21;P21291;E9PS42;E9PND2 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 0 72.876 0.00027135 2013600.0 1858.6 1989.8 1792.2 1968.0 2798.3 1793.1 1977.3 2111.3 3116.4 2922.7 3250.1 False True 2172.28624159272 2091.072320877035 2046.3609091094293 2450.1600883468773 2386.673776885595 1982.8446518365506 2336.549815414234 2410.5832405850747 2410.540375868182 2262.4600400966933 2443.010471803256 0.8891841711956696 0.8559407931369015 0.8376390247721499 1.002926559925199 0.9769396424747712 0.8116398495717277 0.9564223495487351 0.986726527948836 0.9867089820899919 0.9260951052848769 1.0 11.254444332297648 -6.7432864255122835 0.28953718230584347 1.0079632045635865 0.8225626417345586 0.21633152315308712 0.05923977853406325 2.64446881796431 0.315358243453793 0.0304670332114832 0.16285676893660989 1.8059826530737594e-07 6.7432864255122835 -0.18540056282902784 GYHT(ph)LPADFTK ddPTM_A549_MK2206_60min_R1 2 GYHTLPADFTK 11 0 A0A2R8Y661;A0A2R8YGD3 A0A2R8Y661 1 GY(0.033)HT(0.967)LPADFTK;GYHT(1)LPADFTK 89.62899999999999 0.00026829 14505800.0 1474.0300000000002 1547.53 1832.2 1380.85 1693.29 1177.1399999999999 1384.44 1292.6 1893.29 1867.52 2648.5 True False 1722.810227426514 1626.2926669649405 2092.033510584922 1719.1583119887116 1444.2092840876999 1301.704173477707 1635.974827518374 1475.830008421479 1464.4628379628648 1445.6459349510303 1990.8043551185892 0.8653839956683683 0.8169023052333361 1.0508483695075617 0.8635496037410989 0.7254400867541153 0.6538584116168293 0.8217657467505999 0.7413234779334035 0.7356136398825734 0.726161730174091 1.0 10.959135732858131 -4.755659154760076 13.892384586664159 0.8454723394334608 50.262995954957695 0.0 0.11910183888935827 669.5928523601059 38070.92692044384 0.018369494001645635 9.228924719785127 1.75525753169525e-05 4.755659154760076 49.41752361552423 GYHT(ph)LPADFTK ddPTM_A549_PD325901_60min_R1 3 GYHTLPADFTK 11 0 A0A2R8Y661;A0A2R8YGD3 A0A2R8Y661 1 GY(0.001)HT(0.999)LPADFTK;GYHT(1)LPADFTK;GYHT(1)LPADFTK 85.554 0.00037318 15732000.0 3234.23 2455.21 3377.08 3575.25 3050.4700000000003 3337.3900000000003 3021.03 3272.94 3943.5 3962.3 3932.1000000000004 True False 3562.5666486857126 2662.119163260243 3606.2689568317574 3796.0850725181226 2836.215510750199 3310.21140234813 3135.9969498210485 3207.6586441282416 3777.7684088906544 3712.1197017896498 3448.476627635597 1.0330841798769388 0.7719696117196799 1.0457571113956914 1.100800580203108 0.8224546131532905 0.9599054190539006 0.9093861691535383 0.9301668506094909 1.0954890569987223 1.0764520403128892 1.0 11.751743473475443 -8.748362099682915 24.98658768710161 1.04509205546507 0.9443615594468772 0.21724925657720673 0.09265243300322394 270.1345008675248 516142.13524689846 0.015478012910544013 0.01749904910797856 1.7849986842249346e-09 8.748362099682915 -0.10073049601819284 GYISPYFINTSK ddPTM_A549_PD325901_60min_R1 1 GYISPYFINTSK 12 0 P10809;E7ESH4 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 124.42 1.7028e-05 9611700.0 4000.8 2696.6 3468.1 3710.0 4431.5 4111.4 4215.3 4316.9 5134.8 5172.4 4149.7 False True 4406.958270766704 2923.851945718521 3703.46612137948 3939.1582739786686 4120.246727845056 4077.9181215303242 4375.715548200669 4230.796042957466 4919.002212748 4845.813781272692 3639.313207115644 1.2109312993864194 0.8034076154813382 1.017627752988779 1.0823905637681204 1.13214952749576 1.1205185949802596 1.2023465140744685 1.162525949864756 1.3516292588201222 1.3315187524388057 1.0 11.829450502620405 -6.603948628602507 1.708136453269165 1.1691183315545546 0.9904767721605505 0.26890779284469246 0.12658733288533994 0.4467576189432617 2.5983751010420595 0.02178443349290799 0.05905549923137886 2.489151735195532e-07 6.603948628602507 -0.17864155939400406 GYKDDKSDRGPT(ph)PTK ddPTM_A549_MK2206_60min_R1 1 GYKDDKSDRGPTPTK 15 3 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 GY(0.001)KDDKS(0.014)DRGPT(0.859)PT(0.126)K 40.179 0.025733999999999996 2989500.0 1398.2 1129.6 1095.4 1099.1 1964.1 1379.8 1162.9 1036.8 1895.3 2187.5 1865.2 True False 1634.1819772920178 1187.0918150882987 1250.7441914063545 1368.3795493404741 1675.1834918275365 1525.8095201628867 1374.183877178584 1183.7695750668338 1466.0175761721748 1693.34223071527 1402.0193630988074 1.165591589034886 0.8467014410304107 0.8921019383369303 0.9760061703541804 1.1948362026362955 1.088294185032133 0.9801461472980657 0.8443318303753039 1.0456471677623023 1.2077880486419015 1.0 10.453290559013277 -6.534713579291735 24.95804527660359 1.0227423749050346 0.9523328242273079 0.05980744545722916 0.1217698583318703 437.98216475373397 923642.6178167153 0.015113693502668984 0.031480961239303655 2.91935171521967e-07 6.534713579291735 -0.0704095506777267 GYLDDPTVPR ddPTM_A549_MK2206_60min_R1 2 GYLDDPTVPR 10 0 P11413;P11413-2;P11413-3;E7EUI8 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 161.02 2.4163000000000003e-08 21951000.0 4715.1 5377.200000000001 5707.4 5053.2 7021.5 5333.9 5335.200000000001 5138.6 6826.7 7994.5 7998.099999999999 False True 5510.893606872825 5650.876512121815 6516.795141530614 6291.234226846769 5988.646651324803 5898.329757643732 6304.53678005261 5867.012286302501 5280.463349999786 6188.536897578617 6011.951033669618 0.9166564358241366 0.9399405418431348 1.0839734231090112 1.046454668644678 0.9961236573261659 0.9811007648948643 1.0486673535337165 0.9758915622307309 0.8783277376057834 1.0293724720843598 1.0 12.553617543455669 -8.526293650092894 24.97363155220508 0.9417313366550507 1.0039608062744234 0.004518603224165529 0.0584708897522527 135.1180185184394 988127.2302870668 0.010539139384571551 0.011977609121734978 2.9765031733716155e-09 8.526293650092894 0.0622294696193727 GYLDDPTVPR ddPTM_A549_PD325901_60min_R1 2 GYLDDPTVPR 10 0 P11413;P11413-2;P11413-3;E7EUI8 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 193.41 1.2582e-14 44440000.0 5680.1 6266.9 5704.5 6008.4 6175.2 6544.0 5661.0 6388.1 5758.6 5956.7 6891.9 False True 6256.739570531382 6795.033656687464 6091.641673945172 6379.52522193354 5741.475255283487 6490.707833656287 5876.432452818066 6260.684334132495 5516.586068070934 5580.592945423217 6044.239991353666 1.0351573695752814 1.1242163888938583 1.0078424554053638 1.0554718593337629 0.9499085515295081 1.0738666636237637 0.9722367843143803 1.035810017982154 0.9127013612898321 0.9232910925784384 1.0 12.561345229655554 -6.917368228128223 0.5645572988980733 0.9630338250127467 1.0776241401104794 0.3528314614525182 0.0500534379672189 0.8886690681816146 0.4747401916133006 0.010963241358609016 0.048011827818549374 1.2095721307457632e-07 6.917368228128223 0.11459031509773265 GYLDKLEPSK ddPTM_A549_MK2206_60min_R1 1 GYLDKLEPSK 10 1 P25705-2;P25705;P25705-3 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 50.284 0.027775 2203500.0 1718.6 2197.0 1972.6 1687.1 2683.1 2109.1 2090.4 1943.8 3227.3 2715.5 2573.9 False True 2008.657664264097 2308.817915854279 2252.344341763899 2100.439575736797 2288.419544281078 2332.2835620927262 2470.1986214241224 2219.339602637839 2496.3217029390935 2102.0666640033437 1934.7295939738472 1.0382110608740962 1.1933543183737998 1.1641649297035281 1.0856502026324977 1.1828110509132015 1.2054829622481358 1.276766856266692 1.14710583305826 1.290269043650571 1.0864911926455798 1.0 10.917916227934283 -3.8574173901016646 14.573598770295757 1.1523650085443842 0.4434097719521478 0.0 0.08796966742199964 0.0 0.0 0.014606925671115597 0.0 0.00013886174225055968 3.8574173901016646 -0.7089552365922364 GYLDKLEPSK ddPTM_A549_PD325901_60min_R1 2 GYLDKLEPSK 10 1 P25705-2;P25705;P25705-3 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ; 64.374 0.019322 3629400.0 4662.4 4023.3 4377.7 4737.7 5623.3 5396.0 5515.8 5181.3 4967.2 5152.0 4484.1 False True 5135.72341572253 4362.35761077258 4674.79704724862 5030.336968902622 5228.338807331849 5352.056765038101 5725.706787361572 5077.954906848785 4758.445857903298 4826.701840754182 3932.5841270519013 1.30594114449945 1.1092852612520874 1.1887341494085535 1.2791428756220051 1.3294919163627206 1.360951626748878 1.4559654930138526 1.2912514374245623 1.210004847746388 1.2273613697293144 1.0 11.941261913210203 -9.907105127604423 0.8320209055453954 1.0214059615211717 1.2852258065378013 0.2035601368526896 0.10589956511409923 0.3107435975165309 0.4414540786680309 0.039889927422290236 0.020107618756675334 1.2384967532100767e-10 9.907105127604423 0.2638198450166296 GYLDPAVT(ph)R ddPTM_A549_PD325901_60min_R1 2 GYLDPAVTR 9 0 Q96PY5-3;Q96PY5 Q96PY5-3 FMNL2 Formin-like protein 2 1 GYLDPAVT(1)R;GYLDPAVT(1)R 93.111 0.0016966999999999998 4868400.0 1446.9 1164.2 1294.4 1249.3 1802.7 1345.2 1230.7 1216.0 1254.6 1548.3 1626.6 True False 1593.7882228485173 1262.3112197602559 1382.2457678595197 1326.4664236338413 1676.0845709773853 1334.2451371996383 1277.5349619648805 1191.7459260664539 1201.8735249890237 1450.5400737654693 1426.538511866957 1.1172416374253193 0.8848770707972184 0.9689508950238785 0.9298497114514294 1.1749311757337972 0.9353025705933931 0.8955488767652893 0.8354109728918412 0.8425103949111707 1.016825036056756 1.0 10.478302980147781 -7.5019938768175445 24.551829519897158 0.913572359933713 1.0060731407720023 0.20593272127592266 0.09163302979384881 838.7807258423791 986054.2534120161 0.014230153955321467 0.0225913291251263 3.147792694985555e-08 7.5019938768175445 0.09250078083828928 GYLT(ph)DLNSMIPTHGGDINDIKK ddPTM_A549_MK2206_60min_R1 4 GYLTDLNSMIPTHGGDINDIKK 22 1 O94906-2;O94906 O94906-2 PRPF6 Pre-mRNA-processing factor 6 1 GY(0.442)LT(0.474)DLNS(0.072)MIPT(0.012)HGGDINDIKK;GYLT(1)DLNSMIPTHGGDINDIKK;GYLT(0.999)DLNS(0.001)MIPTHGGDINDIKK;GYLT(0.999)DLNS(0.001)MIPTHGGDINDIKK 163.16 2.1034e-33 58286500.0 5340.49 6990.79 7161.18 6755.389999999999 9106.51 8018.91 6842.4400000000005 6776.799999999999 10456.23 9717.57 9590.0 True False 6241.8341495553195 7346.591350921687 8176.74300585664 8410.460853260975 7766.954442320854 8867.465733678348 8085.622778022039 7737.432153079589 8087.910600168199 7522.364187854529 7208.538329464701 0.8658945634015699 1.0191513196084008 1.1343135920404874 1.1667359551774108 1.0774659282275911 1.2301336732070671 1.12167299506091 1.0733704669992596 1.1219903717663662 1.0435352971776641 1.0 12.815491039466238 -5.3486727601623025 3.012263391215952 1.087809208202987 0.8498531228252955 0.558400966374582 0.06135711077259098 0.2203725878217787 3.099263547711171 0.010138187221244068 0.11100763482864633 4.480507821925292e-06 5.3486727601623025 -0.23795608537769164 GYLT(ph)DLNSMIPTHGGDINDIKK ddPTM_A549_PD325901_60min_R1 7 GYLTDLNSMIPTHGGDINDIKK 22 1 O94906-2;O94906 O94906-2 PRPF6 Pre-mRNA-processing factor 6 1 GYLT(1)DLNSMIPTHGGDINDIKK;GYLT(0.995)DLNS(0.005)MIPTHGGDINDIKK;GYLT(1)DLNSMIPTHGGDINDIKK;GYLT(0.997)DLNS(0.003)MIPTHGGDINDIKK;GYLT(1)DLNSMIPTHGGDINDIKK;GYLT(0.996)DLNS(0.004)MIPTHGGDINDIKK;GYLT(0.985)DLNS(0.015)MIPTHGGDINDIKK 134.76 1.7684e-22 69110000.0 14528.55 17292.8 16162.16 16314.4 18964.7 20180.2 18265.2 20011.42 20246.8 19274.3 19879.6 True False 16003.47770064678 18750.12494508687 17259.021368563353 17322.103435309324 17632.684896663246 20015.85914192398 18960.292181100944 19612.276529444705 19395.897406143606 18057.317408627383 17434.535227167307 0.917918229085305 1.075458835052256 0.9899329774888143 0.9935512022320625 1.011365354276102 1.1480580859267375 1.0875134859664128 1.1249096275812354 1.1124986788245443 1.0357211805961783 1.0 14.089660284564653 -7.0294533175114 24.154294280004073 1.0695653318164684 1.0000557344175527 0.39331752453134605 0.052180848561286824 518.6057185630636 425301.9337902838 0.008932733553290736 0.015492379081608549 9.344298050949416e-08 7.0294533175114 -0.06950959739891571 GYLTDLNS(ph)MIPTHGGDINDIKK ddPTM_A549_MK2206_60min_R1 1 GYLTDLNSMIPTHGGDINDIKK 22 1 O94906-2;O94906 O94906-2 PRPF6 Pre-mRNA-processing factor 6 1 GY(0.199)LT(0.339)DLNS(0.429)MIPT(0.032)HGGDINDIKK 40.141999999999996 0.040260000000000004 1849400.0 499.45 504.36 477.34 480.97 756.34 469.72 464.55 505.56 711.74 764.45 482.14 True False 583.7449496198667 530.0297697042624 545.0339897077869 598.8076715915639 645.0833879175398 519.4254586250988 548.9527217674012 577.2246782125661 550.5320264152293 591.760214066417 362.4113316129416 1.6107248827509382 1.462508822076068 1.50390990061505 1.6522873855144675 1.7799757668904634 1.433248392960984 1.5147228408235518 1.5927335264148061 1.5190806092211329 1.632841366832376 1.0 8.501484254999419 -10.5489098919636 0.5562271580454978 0.9262500639260207 1.5785798020533086 0.0 0.2077538020777981 0.34510807671246413 0.16218850484881508 0.11412475032592487 0.02183554303784227 2.825466145835798e-11 10.5489098919636 0.6523297381272879 GYNDDYYEES(ph)YFTTR ddPTM_A549_MK2206_60min_R1 1 GYNDDYYEESYFTTR 15 0 P50402;Q5HY57 P50402 EMD Emerin 1 GYNDDYYEES(0.982)YFT(0.007)T(0.011)R 99.45100000000001 9.6025e-06 1312500.0 1067.9 1003.4 1312.2 1195.2 2004.4 1670.4 1176.9 1283.6 1826.0 2003.6 1683.9 True False 1248.1354123516987 1054.4687741320822 1498.2896914035227 1488.0240536545662 1709.555415212624 1847.160619278218 1390.7274959596475 1465.5542308601343 1412.4139155228152 1550.9853684393659 1265.7411567242561 0.9860905649792402 0.8330840539791344 1.183725190133742 1.1756148133047828 1.3506358753767327 1.4593509972123195 1.0987455757217033 1.1578625085187206 1.1158789520427295 1.2253574596984134 1.0 10.30576668935648 -3.8839026433768504 14.236741042800151 1.1041217891894273 1.1305663706194293 0.0 0.16905953682552843 0.0 0.0 0.023389078056238202 0.0 0.00013064637277755188 3.8839026433768504 0.026444581430002057 GYNVNDEK ddPTM_A549_PD325901_60min_R1 2 GYNVNDEK 8 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 0 ; 118.5 4.6847e-05 5468200.0 4668.8 4074.5 4039.8 3832.8 4226.3 3763.4 3516.6 4382.6 4912.0 4628.6 5405.8 False True 5142.7731390111 4417.872414458991 4313.965121290856 4069.5433510796347 3929.459267943487 3732.7521181512925 3650.4261373573554 4295.185604916814 4705.565721940125 4336.349406078184 4740.920870189594 1.084762492314164 0.9318595554374474 0.9099424435485961 0.8583866853101241 0.828838821725861 0.7873474838237526 0.7699825070506547 0.9059812898216639 0.9925425567695553 0.914663949222331 1.0 12.210951598178248 -8.7015914882614 4.235912020048983 0.9968057450285667 0.8757625903737123 0.14882910907461178 0.08336345682226223 0.19740414597155467 7.137389436054998 0.014368028208717852 0.016081957533827768 1.9879639827709767e-09 8.7015914882614 -0.12104315465485438 GYRDDRS(ph)PAREPGDVSAR ddPTM_A549_MK2206_60min_R1 4 GYRDDRSPAREPGDVSAR 18 3 A0A1W2PR91;A0A1W2PQT1;C9J366;P0DPB3-2;P0DPB3;B3KU38-2;B3KU38 A0A1W2PR91 IQCJ-SCHIP1 1 GYRDDRS(1)PAREPGDVSAR;GY(0.042)RDDRS(0.958)PAREPGDVSAR;GYRDDRS(1)PAREPGDVSAR;GY(0.01)RDDRS(0.99)PAREPGDVSAR 154.65 4.8538e-23 218309000.0 5648.45 5907.2 5965.55 5019.099999999999 7077.6 6389.8 5682.72 6380.300000000001 8568.1 7458.500000000001 8119.200000000001 True False 6601.770268656198 6207.851248308786 6811.554693303068 6248.779725315961 6036.494415640029 7065.9643947940385 6715.196665680866 7284.72706384927 6627.439030444162 5773.619669846779 6102.978561479651 1.0817292248615757 1.0171838530600554 1.1161033296586946 1.0238901648379641 0.9891062789800291 1.1577894832193076 1.1003146411270999 1.193634713028241 1.0859351648840394 0.9460330905122794 1.0 12.575297807188528 -10.488102609844411 1.0530219889931236 1.0047214740077637 1.0837825651605204 0.3127768287434862 0.06011640477727539 0.5742809537293027 1.224366966967048 0.028947204276098606 0.010513573316914784 3.250104987658521e-11 10.488102609844411 0.07906109115275672 GYRDDRS(ph)PAREPGDVSAR ddPTM_A549_PD325901_60min_R1 4 GYRDDRSPAREPGDVSAR 18 3 A0A1W2PR91;A0A1W2PQT1;C9J366;P0DPB3-2;P0DPB3;B3KU38-2;B3KU38 A0A1W2PR91 IQCJ-SCHIP1 1 GYRDDRS(1)PAREPGDVSAR;GY(0.004)RDDRS(0.996)PAREPGDVSAR;GYRDDRS(1)PAREPGDVSAR;GY(0.004)RDDRS(0.996)PAREPGDVSAR 193.76 1.7939999999999998e-41 279048000.0 12827.099999999999 12429.3 13155.5 12535.1 13743.9 13568.4 13262.3 13463.0 14413.4 14495.500000000002 14417.4 True False 14129.297749188065 13476.76073163215 14048.311340448005 13309.364657722368 12778.575877881 13457.903448988685 13767.004083909023 13194.46990348082 13807.654921948657 13580.251656182498 12644.151199428661 1.117457196322242 1.0658493811938212 1.1110521472633759 1.052610368841822 1.0106313722710318 1.0643579973637767 1.088804132975814 1.0435235782435934 1.0920191244290538 1.074034266277687 1.0 13.626182571831237 -10.882709641614163 1.0074789222634097 0.9978515410987022 1.0715214942037028 0.0 0.036186983761268415 0.4332997146303505 0.7422898825706026 0.02387136721410259 0.005096040263999282 1.3100575018230784e-11 10.882709641614163 0.07366995310500057 GYS(ph)DEIYVVPDDSQNR ddPTM_A549_MK2206_60min_R1 1 GYSDEIYVVPDDSQNR 16 0 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GY(0.011)S(0.976)DEIY(0.013)VVPDDSQNR 55.885 0.011423 1288300.0 1106.8 1259.1 1342.7 1185.0 1806.6 700.58 1138.4 1318.6 1604.0 1361.0 1611.9 True False 1293.6007813380083 1323.1828119490767 1533.1150500285867 1475.325053196672 1540.8515331885485 774.7149105926336 1345.2325443117206 1505.5155880431394 1240.6965610616621 1053.549154744448 1211.6207438231645 1.0676614674457974 1.0920767234257542 1.2653423588564312 1.2176459182610322 1.2717275938397397 0.639403802338418 1.1102752665549087 1.2425633975963593 1.0239974574442754 0.8695370726487108 1.0 10.242722468101656 GYS(ph)DRDGYGR ddPTM_A549_MK2206_60min_R1 3 GYSDRDGYGR 10 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 GYS(1)DRDGYGR;GYS(1)DRDGYGR;GY(0.433)S(0.567)DRDGYGR 72.096 0.0019136 15848500.0 3384.19 3717.75 2925.44 2389.74 4180.5599999999995 3496.72 2508.75 2924.8599999999997 4133.7 4831.3 5354.2 True False 3955.358536498261 3906.9675952058487 3340.3113815116003 2975.2264072795047 3565.605161954344 3866.740589465117 2964.5574012140073 3339.4678620080795 3197.423550162467 3739.905974516424 4024.6043715974874 0.9827943746252652 0.9707705986650943 0.8299726067697256 0.739259348888136 0.8859517191596766 0.9607753290617955 0.7366084035826073 0.829763016105492 0.7944690347024875 0.9292605258071471 1.0 11.974631254426605 -10.928827226583063 1.2003488481675935 0.9995527337578182 0.8518079187559118 0.17075684809013936 0.08456681920069603 0.4924356756234569 1.2668473701659257 0.059359982678755585 0.014158095405362772 1.1780745483986545e-11 10.928827226583063 -0.1477448150019064 GYS(ph)DRDGYGR ddPTM_A549_PD325901_60min_R1 6 GYSDRDGYGR 10 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 GY(0.314)S(0.686)DRDGYGR;GYS(1)DRDGYGR;GYS(1)DRDGYGR;GYS(1)DRDGYGR;GY(0.006)S(0.994)DRDGYGR;GYS(1)DRDGYGR 95.417 0.00015551 96955700.0 11330.130000000001 12401.23 12395.43 11922.26 13111.970000000001 12359.369999999999 11764.419999999998 12459.09 12199.57 13379.23 14301.079999999998 True False 12480.356456799136 13446.325174220472 13236.658419575808 12658.670922782987 12191.03046104086 12258.71938845607 12212.12144083763 12210.583675982978 11686.864498047466 12534.463134486321 12542.137822015417 0.9950740961315355 1.0720919643075457 1.0553749773297252 1.0092913267595431 0.9720057803576156 0.9774027013909975 0.9736873899919596 0.9735647821178893 0.9318080110340777 0.9993880877695648 1.0 13.614495657701372 -6.580040780297873 2.7846256395023126 0.9688228965168012 1.0436084865469015 0.565374270209898 0.024797124035290753 0.14815875596668404 2.319942887732051 0.004159449346030383 0.00976720766291154 2.6300210210476894e-07 6.580040780297873 0.07478559003010032 GYS(ph)FSLTTFSPSGK ddPTM_A549_MK2206_60min_R1 1 GYSFSLTTFSPSGK 14 0 H3BT36;A0A024RA52;P25787 H3BT36 PSMA2 Proteasome subunit alpha type;Proteasome subunit alpha type-2 1 GYS(0.998)FS(0.002)LTTFSPSGK 154.47 6.774299999999999e-19 2460500.0 2162.2 2470.5 2308.5 1746.7 3793.9 2501.7 2191.4 2608.1 3387.4 3047.1 3364.5 True False 2527.126499285366 2596.237897641328 2635.8800126543447 2174.6415784123424 3235.82233574894 2766.428233505938 2589.549014058945 2977.806161971267 2620.1593085662576 2358.7579936971415 2529.001794523877 0.9992584840222054 1.0265860242816116 1.0422610289806413 0.8598813900097496 1.2794859785214716 1.0938814830009878 1.0239411532511258 1.1774630482347619 1.0360448593748595 0.9326834005434993 1.0 11.304352345368173 GYS(ph)FSLTTFSPSGK ddPTM_A549_PD325901_60min_R1 1 GYSFSLTTFSPSGK 14 0 H3BT36;A0A024RA52;P25787 H3BT36 PSMA2 Proteasome subunit alpha type;Proteasome subunit alpha type-2 1 GYS(0.697)FS(0.3)LT(0.003)TFSPSGK 226.59 4.7286e-47 5132900.0 7363.7 6893.7 7304.9 8174.4 9271.6 9318.1 8265.2 7567.8 9301.0 8765.6 8328.6 True False 8111.2574031305685 7474.656292442251 7800.65444193217 8679.31412259062 8620.39480128359 9242.216483006214 8579.736708890983 7416.854292175749 8910.111315098758 8212.138520053344 7304.234999345345 1.1104869166801936 1.023331846950732 1.0679632353875959 1.1882577878954494 1.1801913276415952 1.265322991912851 1.1746249552020105 1.01541835563074 1.2198555106588633 1.124298235309977 1.0 12.834517466596521 -2.086867774557048 19.823108631315428 1.1169015799673612 0.0074114908016393866 0.0 0.08542336019163449 0.0 0.0 0.013358569261179785 0.0 0.008187140161355294 2.086867774557048 -1.1094900891657218 GYS(ph)PDTR ddPTM_A549_MK2206_60min_R1 1 GYSPDTR 7 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 GYS(0.902)PDT(0.097)R 64.207 0.028587 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GYS(ph)PDTR ddPTM_A549_PD325901_60min_R1 1 GYSPDTR 7 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 GYS(0.51)PDT(0.49)R 54.711999999999996 0.041798 5494200.0 1137.4 1155.5 1070.6 1306.8 1169.6 950.15 1037.7 1117.4 1238.6 1532.3 1459.5 True False 1252.8680106903755 1252.8780402276034 1143.2573540407916 1387.5180680418664 1087.4513309009542 942.4122934212287 1077.1902413512282 1095.1125804166575 1186.5459493475246 1435.5503164960462 1279.9907525327822 0.9788102048481698 0.9788180404807383 0.8931762606710796 1.0840063221521832 0.8495774901101117 0.7362649234429468 0.841560955983266 0.8555628845362383 0.9269957200859822 1.1215317873628778 1.0 10.321917671978543 GYS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 GYSPGR 6 0 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 GYS(1)PGR;GYS(1)PGR 70.69 0.050479 51504000.0 6027.8 6361.6 5781.5 5145.2 8047.8 6290.3 6329.4 6482.700000000001 8712.0 9137.0 9188.3 True False 7045.145274439148 6685.378267409457 6601.403635763964 6405.7742309768055 6863.979280856194 6955.935370836796 7479.37005091936 7401.642577436116 6738.745910205239 7072.945354077902 6906.591525820698 1.020061089192905 0.9679707048572046 0.955812083440034 0.9274870545085 0.9938302062884137 1.0071444568325234 1.0829321558915561 1.0716780556320207 0.9756977642317548 1.0240862410402123 1.0 12.753758186015567 -6.982450463345322 24.57427188423585 1.0040681753201042 0.9661932916181895 0.24332188420663747 0.03876863912316108 311.4628553215489 436132.14774003037 0.006283218708548811 0.011872017231154414 1.0412368667873061e-07 6.982450463345322 -0.03787488370191472 GYS(ph)PGRGDSNR ddPTM_A549_MK2206_60min_R1 3 GYSPGRGDSNR 11 1 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 GY(0.002)S(0.998)PGRGDSNR;GYS(1)PGRGDSNR;GY(0.013)S(0.926)PGRGDS(0.061)NR 71.933 0.00062743 45421000.0 3902.7999999999997 4667.299999999999 4099.6 4067.0 5036.0 3680.1 3037.4 2960.3999999999996 5022.0 6555.5 6313.299999999999 True False 4561.497225701102 4904.845634349873 4680.9849252232025 5063.415182574568 4295.21107114886 4069.525739347325 3589.2562632575723 3380.045765844767 3884.525018486076 5074.607997007521 4745.533371784099 0.9612190808356265 1.0335709919380212 0.9863980628721974 1.0669854757908825 0.9051060723094361 0.8575486505992842 0.7563441202623299 0.7122583492809846 0.8185644719269304 1.0693440756691392 1.0 12.212354531989162 -6.889721536553634 5.976803659515955 0.8789046912313305 1.011176156241572 0.31808510653435595 0.09753686985457068 0.22754400796973007 11.219320245883372 0.015202357378280093 0.029022096835780567 1.2890758238561469e-07 6.889721536553634 0.13227146501024145 GYS(ph)PGRGDSNR ddPTM_A549_PD325901_60min_R1 4 GYSPGRGDSNR 11 1 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 GYS(0.999)PGRGDS(0.001)NR;GY(0.018)S(0.978)PGRGDS(0.004)NR;GYS(0.999)PGRGDS(0.001)NR;GY(0.002)S(0.996)PGRGDS(0.002)NR 72.652 0.0011677 64518200.0 12482.150000000001 12422.48 12022.800000000001 12808.820000000002 14480.21 14442.900000000001 12962.460000000001 13923.1 13656.6 14411.17 15365.4 True False 13749.328679126837 13469.365986297349 12838.739506969585 13599.991720459158 13463.17000361261 14325.281810928238 13455.75350863029 13645.392848039355 13082.660594105775 13501.246266774342 13475.553209295784 1.0203164549595036 0.9995408557331682 0.9527430382682243 1.0092343898043112 0.999081061423539 1.0630570477096473 0.9985306947805427 1.0126035373914306 0.9708440455773659 1.0019066421303457 1.0 13.71805688042519 -5.302765234417946 4.863167879321582 0.9938981026168032 1.0209837943957734 0.0 0.02655409803635479 0.36258667049611615 19.933061094099646 0.0037888940577112265 0.028099919347910708 4.980062183207393e-06 5.302765234417946 0.027085691778970133 GYS(ph)SLLK ddPTM_A549_PD325901_60min_R1 1 GYSSLLK 7 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 GYS(0.664)S(0.336)LLK 76.899 0.017471 3711300.0 1248.6 1310.7 1400.2 1702.9 1495.5 1061.3 1593.9 1113.3 1130.7 1245.6 1504.2 True False 1375.3569528292621 1421.1572889020492 1495.2259920866022 1808.0842654334963 1390.461239194918 1052.657124672894 1654.556736715547 1091.094358133045 1083.1806111151677 1166.9526034245737 1319.1929359094283 1.0425745282520902 1.0772929798341655 1.1334399627116103 1.3705988079651403 1.054024169888659 0.7979553983490753 1.2542189180045333 0.8270923292815117 0.8210933985698173 0.8845958552833647 1.0 10.365439863144008 -7.003696994732527 24.99120858835605 0.9270154334867015 1.1566921749331642 0.3602462920279196 0.1406713343043927 132.54913182370473 896027.1466261585 0.02066252427455869 0.038451857838140105 9.91523485008895e-08 7.003696994732527 0.22967674144646277 GYS(ph)SNYRRSPERPTGDLR ddPTM_A549_PD325901_60min_R1 1 GYSSNYRRSPERPTGDLR 18 3 Q5T200;Q5T200-2;Q5T9K0 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GY(0.056)S(0.333)S(0.333)NY(0.046)RRS(0.23)PERPT(0.001)GDLR 47.391999999999996 0.006534100000000001 16359000.0 1960.3 1859.4 1728.3 2230.4 2255.8 3193.5 2513.3 2461.3 2429.2 2217.7 2380.2 True False 2159.3082129034115 2016.0981635648686 1845.5928311121818 2368.166742394076 2097.360390087527 3167.493194801552 2608.9450068305323 2412.2074406475026 2327.109171770552 2077.6740435249503 2087.450489330952 1.034423678041576 0.9658184344343647 0.8841372959718493 1.134478041274692 1.0047473704441015 1.5173979986546955 1.2498236581729534 1.1555758821473356 1.1148092774724505 0.995316561587463 1.0 11.027526264455348 -6.275012637671718 24.207326309708776 1.110360373442761 0.9618956645237979 0.21425343180297196 0.14637008110403218 723.6798207653036 1290651.9576050881 0.02226527138422363 0.052021765416341105 5.308689960823441e-07 6.275012637671718 -0.14846470891896302 GYSDEIYVVPDDS(ph)QNR ddPTM_A549_MK2206_60min_R1 1 GYSDEIYVVPDDSQNR 16 0 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 GYSDEIYVVPDDS(1)QNR 97.417 2.48e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GYSFTTT(ph)AER ddPTM_A549_MK2206_60min_R1 1 GYSFTTTAER 10 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;A0A2R8YEA7 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 1 GYS(0.002)FT(0.035)T(0.162)T(0.801)AER 54.784 0.019597 4194700.0 4133.5 4925.5 4258.1 3624.8 5606.9 3725.6 4084.3 4379.0 5774.6 5482.6 6843.9 True False 4831.133745627628 5176.1869114885085 4861.962608569838 4512.876162723453 4782.132437415517 4119.84051914687 4826.3644419644725 4999.736660125063 4466.662320141319 4244.076852168929 5144.370747969082 0.9391107255508139 1.0061846560207557 0.9451034629433086 0.8772455143333256 0.9295854967885877 0.8008444027431965 0.9381836338039684 0.9718849797322408 0.8682621333045811 0.8249943598727647 1.0 12.328778904190708 -5.993858598348521 23.834368787966252 0.9249103097754034 0.9733968105736982 0.09827962600150197 0.06116311507156587 177.4013748991003 688450.7994288106 0.008667239742346759 0.02682658215372821 1.01424155821773e-06 5.993858598348521 0.04848650079829475 GYSFTTT(ph)AEREIVR ddPTM_A549_MK2206_60min_R1 2 GYSFTTTAEREIVR 14 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;A0A2R8YEA7 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 1 GY(0.001)S(0.004)FT(0.061)T(0.265)T(0.669)AEREIVR;GYS(0.002)FT(0.038)T(0.181)T(0.778)AEREIVR 59.63399999999999 0.003082 13951300.0 1828.7799999999997 1794.8200000000002 1752.58 1852.06 2451.2 1691.0900000000001 1798.2 1503.5700000000002 2698.3 2990.8 2592.2 True False 2137.4333546217235 1886.1686717039502 2001.1221973479542 2305.814783142134 2090.6317270850063 1870.0400213453097 2124.909663722184 1716.7056519900068 2087.1393582996793 2315.17620279919 1948.4851989195404 1.096971819856244 0.9680179622354096 1.027014317818581 1.1833884005999826 1.0729523263734762 0.9597404293254423 1.0905444213281545 0.8810462881329258 1.0711599756862533 1.188192860835168 1.0 10.92813725721267 GYSFTTT(ph)AEREIVR ddPTM_A549_PD325901_60min_R1 2 GYSFTTTAEREIVR 14 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;A0A2R8YEA7 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 1 GYSFT(0.003)T(0.02)T(0.977)AEREIVR;GYS(0.005)FT(0.162)T(0.065)T(0.768)AEREIVR 104.41 9.2777e-06 29885000.0 2364.1 2139.6 2288.9 1863.6599999999999 2473.8 2661.9 2353.1 2763.8 2507.7 2298.29 2380.0 True False 2604.1016916415647 2319.9116009268528 2444.238518273837 1978.7740455210455 2300.048822146699 2640.2223689501316 2442.648508165726 2708.6738408408437 2402.310089761655 2153.1755771713747 2087.27508806305 1.2476082843771779 1.1114546492669946 1.17101887156716 0.9480178520011507 1.101938520370642 1.2649134673476152 1.1702571080041277 1.297708124976684 1.150931232543455 1.0315724982706898 1.0 11.027405034671581 -10.386869211754048 0.9587558717615042 1.008105327462866 1.1581310996417467 0.27667363771828224 0.09042551187451194 0.5180935816287805 0.9164874309804115 0.04646640047523042 0.01727828507810015 4.103276549922559e-11 10.386869211754048 0.1500257721788807 GYSS(ph)LLK ddPTM_A549_MK2206_60min_R1 2 GYSSLLK 7 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 GYS(0.114)S(0.886)LLK;GYS(0.122)S(0.878)LLK 94.11399999999999 0.012062999999999999 3486800.0 1483.3899999999999 1929.19 1842.87 1385.9699999999998 2279.3 1630.2 2041.9099999999999 2189.5 2357.2 2250.3 2434.07 True False 1733.7499665964854 2027.3775307632766 2104.2166770285085 1725.5327122185568 1944.0179893704517 1802.7066819608192 2412.8986160888467 2499.8683300625316 1823.2979636749078 1741.9556670987756 1829.6232420855213 0.9475994438178685 1.1080847051616716 1.1500819560151565 0.9431082162312742 1.062523663152932 0.9852884684094738 1.31879534572291 1.366329565868994 0.9965428519571038 0.9520843565111161 1.0 10.837330882496623 GYSS(ph)LLK ddPTM_A549_PD325901_60min_R1 1 GYSSLLK 7 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 GYS(0.14)S(0.86)LLK 63.565 0.026432 3498400.0 1268.3 1765.7 1286.7 904.45 1384.2 1247.9 1086.7 1095.1 1341.2 1223.9 1580.5 True False 1397.0568823268873 1914.501735724689 1374.0231995556583 960.3158223450149 1286.9785672307635 1237.737516139927 1128.0549631650572 1073.2573714106697 1284.8340281486358 1146.6227451279199 1386.1085196149781 1.0078986331567676 1.381206239361752 0.9912811155199617 0.6928143134216963 0.9284832673766769 0.8929585949617679 0.813828749482327 0.7742953428414034 0.926936102020011 0.8272243687286616 1.0 10.436824496380773 -5.968464176122067 13.434996456773932 0.9152709100312707 1.1925960121420536 0.4908912561668318 0.12250354869219184 0.9746242021523246 413.01771360240065 0.016758637035941965 0.05206877707647941 1.075315296834406e-06 5.968464176122067 0.2773251021107829 GYSSLDQSPDEKPLVALDT(ph)DSDDDFDMSR ddPTM_A549_PD325901_60min_R1 1 GYSSLDQSPDEKPLVALDTDSDDDFDMSR 29 1 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRW1;Q5T586;A0A0A0MRW2;Q8IW50-3;Q8IW50-2;Q8IW50-5;Q8IW50-6 Q5T593 FAM219A Protein FAM219A 1 GYSSLDQSPDEKPLVALDT(0.428)DS(0.428)DDDFDMS(0.145)R 48.76 0.0029831 3202600.0 1112.2 1214.6 1163.2 986.47 985.45 1078.4 1011.9 1081.5 747.1 1151.4 1056.3 True False 1225.109725241635 1316.9586046390702 1242.141746889828 1047.4020114640803 916.2353916179416 1069.617867942381 1050.4084082329266 1059.9286340796627 715.7019851102339 1078.700407500846 926.3817964373942 1.3224673994599905 1.421615374679992 1.3408529309046857 1.1306375141352043 0.9890472752611581 1.1546188321659956 1.133882824848787 1.144159609089743 0.7725777728606326 1.164423147830869 1.0 9.8554630941732 -6.646125347772756 0.47622749412644316 0.9041415676034417 1.4722219089616144 0.392411243073833 0.13525001091935085 0.8034372877579307 0.25780273967002976 0.03249194769071834 0.20571447842274806 2.2587837371285293e-07 6.646125347772756 0.5680803413581728 GYSSLDQSPDEKPLVALDTDS(ph)DDDFDMSR ddPTM_A549_PD325901_60min_R1 1 GYSSLDQSPDEKPLVALDTDSDDDFDMSR 29 1 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRW1;Q5T586;A0A0A0MRW2;Q8IW50-3;Q8IW50-2;Q8IW50-5;Q8IW50-6 Q5T593 FAM219A Protein FAM219A 1 GYSSLDQSPDEKPLVALDT(0.184)DS(0.778)DDDFDMS(0.038)R 83.559 6.806100000000001e-07 7872600.0 2426.3 2530.0 2836.0 2306.8 3623.2 2551.5 2710.1 3548.4 2946.9 2860.8 2900.2 True False 2672.616189852344 2743.2119790357715 3028.468014253397 2449.285796877087 3368.7189313614376 2530.72142994713 2813.2343385236227 3477.624378334049 2823.0520411207976 2680.1685997728164 2543.493785882543 1.050765763488979 1.0785212034964458 1.1906724644120086 0.9629611876669997 1.324445512727116 0.9949784206250849 1.1060511938886004 1.3672627775370725 1.1099111217766366 1.0537350689232567 1.0 11.312595854157541 -10.121164865726914 1.1205940759382005 1.0136068274283434 1.1314966093750818 0.09860746246689067 0.11914480145172492 0.6131008437824675 1.540744364922989 0.04004720191618148 0.020739670709874033 7.565456426379622e-11 10.121164865726914 0.11788978194673838 GYT(ph)ISDSAPSR ddPTM_A549_PD325901_60min_R1 1 GYTISDSAPSR 11 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 GYT(0.953)IS(0.044)DS(0.003)APSR 112.84 3.6976999999999998e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GYT(ph)ISDSAPSRR ddPTM_A549_PD325901_60min_R1 2 GYTISDSAPSRR 12 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 GYT(0.995)IS(0.005)DSAPSRR;GYT(0.776)IS(0.222)DS(0.002)APSRR 140.31 1.1123e-09 32586000.0 4708.9 4222.0 5044.5 5272.0 5445.8 5237.8 5162.4 5508.1 5498.4 5361.6 5475.4 True False 5186.9440614910345 4577.80275711029 5386.85010504276 5597.63946641928 5063.305794990096 5195.145093387055 5358.857956973672 5398.236624479145 5267.3213692010595 5023.06766098362 4801.960511420341 1.0801721607570698 0.9533195340159619 1.1218022497751483 1.1656987709721065 1.0544247048571527 1.0818800115143836 1.1159729331861186 1.1241734728223398 1.0969105965519637 1.046045182803446 1.0 12.22940782437946 -10.64636722492874 0.9409553951704438 1.0005196771151461 1.0880426542190653 0.16833144187626692 0.05270385806113618 0.5952452368973514 0.9473997559355207 0.03444608113765262 0.00946780588618323 2.2575260741947494e-11 10.64636722492874 0.08752297710391921 GYT(ph)SDSEVYTDHGR ddPTM_A549_MK2206_60min_R1 2 GYTSDSEVYTDHGR 14 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.828)S(0.158)DS(0.014)EVYTDHGR;GYT(0.662)S(0.282)DS(0.055)EVYTDHGR 86.54799999999999 8.8077e-05 21043500.0 1106.08 1334.52 900.3699999999999 892.5999999999999 1529.79 1035.73 1220.12 1333.9099999999999 1583.1799999999998 1733.6100000000001 1830.28 True False 1292.7592629403182 1402.441367804212 1028.0560047622243 1111.2870400703368 1304.759917500559 1145.3302611380686 1441.8000105109065 1522.9958274280473 1224.592257818954 1341.9862969555654 1375.7709628417792 0.9396616863245951 1.0193857885380446 0.7472581065664315 0.8077558475103102 0.9483845441871076 0.8325006793080482 1.0479942152091495 1.1070126267835758 0.8901134643003717 0.9754431029592102 1.0 10.426024596071478 -7.74862936184166 24.98034215293818 0.968047175769158 0.8821647445937987 0.2833615319987086 0.08820218404710731 331.1785099595745 645817.1919756345 0.014640194537255626 0.021635940125191003 1.783900544918578e-08 7.74862936184166 -0.08588243117535932 GYT(ph)SDSEVYTDHGR ddPTM_A549_PD325901_60min_R1 3 GYTSDSEVYTDHGR 14 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.757)S(0.241)DS(0.001)EVYTDHGR;GYT(0.878)S(0.119)DS(0.003)EVYTDHGR;GYT(0.75)S(0.239)DS(0.011)EVYTDHGR 110.6 9.6445e-06 32404200.0 3615.35 3593.55 2980.4 3412.44 3834.81 3405.59 3445.87 3366.08 3532.5299999999997 3925.71 3662.6000000000004 True False 3982.3776705199975 3896.391070064824 3182.667866601138 3623.218668586457 3565.4661749763036 3377.8560041597652 3577.0044685024177 3298.940893761324 3384.0700488039806 3677.840000634138 3212.1234191343374 1.2397959701041756 1.2130265751478801 0.9908298814554461 1.1279823953847046 1.1100028578407461 1.0515959580002976 1.1135949656213444 1.027028063152811 1.053530517739565 1.144987138017664 1.0 11.649311611126373 -2.0000000000000004 0.278290791600312 1.019681696249399 2.578313961018642 0.3466587603442155 0.06312313228371136 22.763822776912843 0.282823097455082 0.019066448692190593 17.50954450079988 0.00999999999999999 2.0000000000000004 1.558632264769243 GYT(ph)SDSEVYTDHGRPGK ddPTM_A549_MK2206_60min_R1 2 GYTSDSEVYTDHGRPGK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.491)S(0.491)DS(0.017)EVYTDHGRPGK;GY(0.002)T(0.483)S(0.483)DS(0.032)EVYTDHGRPGK 93.381 2.3606e-06 12873100.0 2049.03 2847.3 2681.1 2494.7 3300.2 2660.9 2568.8999999999996 2564.2 3639.9 3879.1 4119.2 True False 2394.8561700262208 2992.215408198402 3061.3202953985565 3105.901611991338 2814.7449517485034 2942.4746718375304 3035.635877619798 2927.6832025331537 2815.4684617259004 3002.8086158480464 3096.2889558635034 0.7734601660775343 0.9663876501358134 0.9887062670947665 1.003104573334356 0.9090705008065108 0.9503230201642867 0.9804110407302764 0.9455458596617549 0.9093041708507833 0.9698089095210474 1.0 11.59632439947084 -11.994498163315114 0.007215901335999378 1.9529138028251234 2.9444566410546413e-06 0.1434835688550511 0.05763292671041087 18443.84884494342 19.376078199696966 2772.491478806457 2478.035974626121 1.0127490318459391e-12 11.994498163315114 -1.9529108583684824 GYT(ph)SDSEVYTDHGRPGK ddPTM_A549_PD325901_60min_R1 5 GYTSDSEVYTDHGRPGK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.498)S(0.498)DS(0.003)EVYTDHGRPGK;GYT(0.885)S(0.113)DS(0.003)EVYTDHGRPGK;GYT(0.532)S(0.463)DS(0.004)EVYTDHGRPGK;GYT(0.82)S(0.17)DS(0.01)EVYTDHGRPGK;GYT(0.495)S(0.495)DS(0.011)EVYTDHGRPGK 132.13 2.1921e-12 47089800.0 6266.6 6688.5 6494.799999999999 6943.7 8155.900000000001 7560.4 6783.099999999999 6548.7 6909.0 7547.3 8729.3 True False 6902.780618772909 7252.163368292788 6935.576184405131 7372.59657871312 7583.057720327537 7498.830609042629 7041.234582354743 6418.08104114423 6618.638756694692 7070.762189969727 7655.651439591919 0.9016581636769057 0.9472953968081076 0.9059420010343141 0.9630266786422701 0.9905176300361642 0.9795156778248449 0.9197433605637187 0.8383455140019205 0.8645428555518844 0.9236003292159589 1.0 12.902309430340294 -7.590189185554741 0.004181682769262986 1.8548166156008654 3.337276297323303e-07 0.0 0.04942459887538799 37027.50937912196 64.84306244936259 14238.137566115012 14521.796556699765 2.569276321500791e-08 7.590189185554741 -1.8548162818732357 GYTIS(ph)DSAPSR ddPTM_A549_MK2206_60min_R1 1 GYTISDSAPSR 11 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 GYT(0.077)IS(0.491)DS(0.422)APS(0.01)R 111.5 6.4117e-05 20276000.0 2178.4 2567.4 2600.4 3108.9 4438.3 4736.5 4351.1 5339.7 7011.9 7340.9 6906.9 True False 2546.060663233391 2698.0696937479647 2969.1758219217522 3870.580639563824 3785.4319493804583 5237.713286165759 5141.638548449338 6096.618827145423 5423.715845703408 5682.585591523529 5191.726109257531 0.4904073538651105 0.519686446659224 0.5719053277150582 0.7455286658250461 0.7291278217913951 1.0088577817743942 0.9903524261961969 1.174295157110532 1.044684509845812 1.094546490307093 1.0 12.341998560287545 -6.812536801166324 1.0323815024193177 1.0363118231307278 0.5033052499635446 0.9277776712853669 0.0633657490181475 0.09930819539823661 0.20384682028232792 0.010167823294301544 0.03154482875550334 1.5397960415759233e-07 6.812536801166324 -0.5330065731671831 down GYTS(ph)DSEVYTDHGR ddPTM_A549_MK2206_60min_R1 1 GYTSDSEVYTDHGR 14 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GY(0.002)T(0.35)S(0.583)DS(0.065)EVYTDHGR 53.816 0.0045143 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GYTS(ph)DSEVYTDHGR ddPTM_A549_PD325901_60min_R1 1 GYTSDSEVYTDHGR 14 0 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.304)S(0.692)DS(0.004)EVYTDHGR 112.1 2.3907e-06 11280000.0 2930.8 3584.4 3975.9 3902.1 4198.4 4109.4 3850.4 3893.5 3773.8 4012.3 4255.7 True False 3228.3326584590723 3886.469967452893 4245.728483028942 4143.123854687912 3903.518867693713 4075.9344088672287 3996.9290790197247 3815.8410881083396 3615.200309743006 3758.962693256597 3732.275879105006 0.8649769639304428 1.0413136899153506 1.1375709139826664 1.1100797446091866 1.0458816534831747 1.0920774725379174 1.0709093348099932 1.0223898799848024 0.9686315874939893 1.0071502790833324 1.0 11.865839914663779 -8.522110576755571 4.1181606727387 0.9853241781108977 1.0579582059961457 0.12828588401603003 0.06678513549336614 0.2613260105764558 10.391967777783265 0.011236258135795252 0.013151089713146944 3.005311015789164e-09 8.522110576755571 0.07263402788524798 GYTS(ph)DSEVYTDHGRPGK ddPTM_A549_MK2206_60min_R1 4 GYTSDSEVYTDHGRPGK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.079)S(0.895)DS(0.026)EVYTDHGRPGK;GYT(0.034)S(0.966)DSEVYTDHGRPGK;GYT(0.096)S(0.892)DS(0.012)EVYTDHGRPGK;GYT(0.085)S(0.831)DS(0.085)EVYTDHGRPGK 221.41 5.537499999999999e-64 1422960000.0 22326.399999999998 24678.5 22137.5 21565.2 30156.0 23818.6 22559.6 25071.4 35445.9 34728.1 39083.6 True False 26094.550491927115 25934.530239603915 25276.930379092748 26848.674968098618 25720.092347411635 26339.06844249294 26658.38730380769 28625.347727942335 27417.46024547108 26882.99809028704 29378.06346751479 0.8882324909121915 0.8827855610115823 0.860401517174305 0.9139021364627019 0.8754863088866287 0.8965556382440844 0.9074249340255385 0.9743783064392662 0.933263020409372 0.9150704613329363 1.0 14.842451679531726 -9.186156278971891 0.23710510923537492 1.0250245779241691 0.8591689933284062 0.3952660781574159 0.031239767844411875 0.6837043859708996 0.12512464163552986 0.041651013424416676 0.026705849769269402 6.513939506144426e-10 9.186156278971891 -0.16585558459576288 GYTS(ph)DSEVYTDHGRPGK ddPTM_A549_PD325901_60min_R1 3 GYTSDSEVYTDHGRPGK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.109)S(0.891)DSEVYTDHGRPGK;GYT(0.109)S(0.891)DSEVYTDHGRPGK;GY(0.016)T(0.292)S(0.674)DS(0.016)EVYT(0.002)DHGRPGK 172.56 2.7893e-30 1976120000.0 13599.800000000001 12518.400000000001 12556.9 14260.599999999999 16452.3 14164.8 15564.3 13915.400000000001 15886.3 15924.7 15207.9 True False 14980.441684356385 13573.369501328621 13409.086744773795 15141.444873827537 15296.747205353764 14049.446565124474 16156.607953611752 13637.846430579883 15218.65405709639 14919.211724273702 13337.424710821037 1.123188472224501 1.0176904309207575 1.0053730038224409 1.1352600072443406 1.1469041090775998 1.0533852576296647 1.2113738824334979 1.0225247171978489 1.1410489196425646 1.1185976339322325 1.0 13.70319250667175 -4.903088130149422 17.95342816093827 1.0762441362757567 3.7029077287011676 0.009938207805653354 0.0676904440302342 495.4093748349463 95451.66446387873 0.009711597254499877 2115.0694141832673 1.2500053444338123e-05 4.903088130149422 2.6266635924254107 GYTSDLNYDSEPVPPPPT(ph)PR ddPTM_A549_MK2206_60min_R1 2 GYTSDLNYDSEPVPPPPTPR 20 0 H0YGW5;F5H7J9;O75581 H0YGW5 LRP6 Low-density lipoprotein receptor-related protein 6 1 GYTSDLNYDSEPVPPPPT(1)PR;GYTSDLNY(0.002)DS(0.012)EPVPPPPT(0.985)PR 150.7 2.3751e-21 8445200.0 1185.56 1104.7 942.64 1190.08 1923.91 1370.85 986.82 925.8199999999999 1953.99 2200.3999999999996 1608.69 True False 1385.6535438408832 1160.9245114447992 1076.3205263714508 1481.6496534247212 1640.905387588166 1515.9124371034166 1166.1124203950212 1057.0578202048375 1511.4143848808462 1703.3281117558297 1209.207875414659 1.1459183917121925 0.9600702534679553 0.8901038012197542 1.2253059904333135 1.3570085185109055 1.2536408899781464 0.9643605901881349 0.8741737807838488 1.2499210562638416 1.4086313415480594 1.0 10.239846564857343 -6.2624878402192365 24.99899412650423 1.1244862864996017 0.9948347636203998 0.130074679523826 0.16953981966744575 166.5281956005194 3970687.5746740974 0.022988684287531636 0.05641828740115217 5.464018483347428e-07 6.2624878402192365 -0.1296515228792019 GYTSDLNYDSEPVPPPPT(ph)PR ddPTM_A549_PD325901_60min_R1 2 GYTSDLNYDSEPVPPPPTPR 20 0 H0YGW5;F5H7J9;O75581 H0YGW5 LRP6 Low-density lipoprotein receptor-related protein 6 1 GYTSDLNY(0.001)DS(0.005)EPVPPPPT(0.994)PR;GYTSDLNYDSEPVPPPPT(1)PR 194.18 1.7361999999999997e-45 12670400.0 3401.5 3527.3 3921.7 4145.6 4770.299999999999 4005.6000000000004 3261.1000000000004 3672.8999999999996 4271.9 4253.5 4287.200000000001 True False 3746.8177759480463 3824.557950060428 4187.8501450978665 4401.66429665929 4435.250584641605 3972.9797216524485 3385.2029450423934 3599.641128165692 4092.366898932418 3984.93328409315 3759.9015787999588 0.9965201741115552 1.0171962935479566 1.1138190873694347 1.1706860417511677 1.1796187989732423 1.0566712022606979 0.9003434994494837 0.9573764240165519 1.0884239422667472 1.059850424426539 1.0 11.876479182300205 -7.5188369833709645 24.9842457158089 1.0234604779784642 1.0985756344999518 0.2659533733489967 0.07049045637402965 239.51123404069511 1480545.2569418566 0.0121097109231292 0.018204142787230555 3.0280498225612834e-08 7.5188369833709645 0.07511515652148759 GYVLGETSNLPS(ph)PGK ddPTM_A549_PD325901_60min_R1 1 GYVLGETSNLPSPGK 15 0 B1AKT1;Q9H040 B1AKT1 SPRTN SprT-like domain-containing protein Spartan 1 GYVLGETSNLPS(1)PGK 157.86 1.6035999999999998e-19 3963200.0 3124.6 2113.2 2583.0 2900.9 3028.3 3622.3 2741.8 3062.0 3457.5 3940.9 4618.3 True False 3441.8070917910522 2291.2867802760456 2758.2979128408047 3080.0820045780915 2815.602655067853 3592.8011897697374 2846.1406993705305 3000.92600790747 3312.1932987801283 3692.070901441797 4050.2783778157927 0.8497705023542425 0.5657109380001865 0.6810144033428837 0.7604618046622015 0.6951627499209653 0.8870504332364532 0.7027024895274923 0.7409184574433596 0.8177692962838534 0.9115597884984964 1.0 11.983805353274766 -10.347920298098117 0.2786477934187081 1.1070238195264899 0.6875654916069522 0.48781181316524913 0.08472570542946785 1.6143407552228426 0.19798448214555778 0.226340037406607 0.05011300590174364 4.488277514288749e-11 10.347920298098117 -0.41945832791953763 GYYS(ph)PGIVSTR ddPTM_A549_MK2206_60min_R1 2 GYYSPGIVSTR 11 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 GYYS(0.999)PGIVS(0.001)TR;GYYS(0.985)PGIVS(0.014)TR 162.49 1.5787000000000001e-13 26869000.0 7694.799999999999 7585.9 6826.1 7150.6 9364.3 6956.0 6680.1 6542.1 9314.9 9995.400000000001 10969.9 True False 8993.494120202125 7971.989908001359 7794.143623296436 8902.497321002631 7986.8238748132035 7692.0793029808965 7893.787701385036 7469.462709340982 7205.090022838703 7737.432197893211 8245.771076162131 1.0906795783115544 0.9667973843037856 0.9452292031037202 1.0796440064579338 0.9685963630378336 0.9328514255286673 0.9573134675306896 0.9058537570773223 0.8737921482768356 0.9383515654783957 1.0 13.009438693514777 -6.993714974699801 24.80903478693951 0.937618590177358 1.0129573501170746 0.39584448104789693 0.04916679416853215 160.22261896569856 632442.7787668891 0.00849525086699671 0.016024498609605003 1.0145770291223721e-07 6.993714974699801 0.0753387599397165 GYYS(ph)PYSVSGSGS(ph)TAGSR ddPTM_A549_PD325901_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYS(0.998)PYS(0.002)VS(0.002)GS(0.266)GS(0.612)T(0.114)AGS(0.006)R;GYY(0.002)S(0.995)PYS(0.003)VS(0.012)GS(0.099)GS(0.804)T(0.085)AGSR 127.59 1.5054e-22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 GYYS(ph)PYSVSGSGSTAGS(ph)R ddPTM_A549_MK2206_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYY(0.002)S(0.967)PYS(0.031)VSGS(0.001)GS(0.032)T(0.123)AGS(0.845)R;GYYS(0.797)PY(0.002)S(0.199)VS(0.004)GS(0.089)GS(0.057)T(0.095)AGS(0.756)R 100.02 1.5108e-07 6425000.0 2461.7 2678.4 2534.5 2302.7 4212.3 2576.3999999999996 2217.8999999999996 2421.8 3605.3 3554.3 3331.3999999999996 True False 2877.174777213387 2814.719119628631 2893.930210990877 2866.861603372132 3592.6762500000686 2849.032937924093 2620.8637210373877 2765.097566451444 2788.7053064810552 2751.3811614314427 2504.1214380374045 1.1489757379611596 1.1240345922818569 1.1556668806202082 1.1448572580485648 1.4347052804339293 1.137737529277738 1.0466200565302775 1.104218639100258 1.1136461930802735 1.0987411072155617 1.0 11.290088812510147 -9.415898826337216 0.43250102692142856 0.9996774488193543 1.1853699912378448 0.2013900947620022 0.09309393825862476 0.9190456587162797 0.40507982449168933 0.06652566545900403 0.0352636443226095 3.8379664471637435e-10 9.415898826337216 0.18569254241849054 GYYS(ph)PYSVSGSGSTAGSR ddPTM_A549_MK2206_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.904)PYS(0.096)VSGSGSTAGSR 203.06 6.843100000000001e-49 88452000.0 3930.8 4076.9 3401.9 3295.6 4823.2 3029.4 3301.5 3419.1 5822.8 5823.8 6063.3 True False 4594.22294116683 4284.396796152168 3884.3405739869277 4103.0221479451075 4113.713669254405 3349.9690972470307 3901.3398146918007 3903.767895554599 4503.945097100904 4508.19953519524 4557.615271433091 1.0080321983216078 0.9400523170541745 0.8522747846519174 0.9002563629410866 0.9026022216133426 0.7350267404632578 0.8560046389051764 0.8565373913904547 0.9882240665050012 0.9891575454936737 1.0 12.154063430102976 -8.770408930203901 23.415591433013304 0.9944391749665159 0.8779525670804985 0.37877898083786377 0.06325062972060164 63.784981470662274 166514.07013720178 0.011254018959156916 0.012076361964302654 1.6966453446256116e-09 8.770408930203901 -0.11648660788601739 GYYS(ph)PYSVSGSGSTAGSR ddPTM_A549_PD325901_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.545)PYS(0.455)VSGSGSTAGSR;GYYS(0.569)PYS(0.431)VSGSGSTAGSR 328.73 1.5409999999999994e-175 205071000.0 38246.0 34574.0 36000.0 36997.0 40005.0 41182.0 35976.0 36017.0 39762.0 39377.0 41025.0 True False 42128.70576478289 37487.672317463555 38443.17648558613 39282.22066371663 37195.18680975775 40846.627445848586 37345.08636682257 35298.61268021011 38090.94141607968 36890.72949987915 35979.185078901915 1.1709188430031183 1.0419266649662449 1.0684838025452972 1.0918040688684638 1.0337973672330032 1.1352849531269935 1.0379636527321352 0.98108427422135 1.058693834575372 1.0253353270502994 1.0 15.134874889764712 -2.000000000011552 0.08997358644944611 0.9647597567308961 1.363068398043977 0.37416211775487607 0.04237736372504072 108.68724334112503 0.682264305288353 0.3869341860402245 5.358191213801734 0.009999999999734003 2.000000000011552 0.39830864131308097 GYYSPYS(ph)VSGSGSTAGSR ddPTM_A549_MK2206_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.366)PYS(0.633)VS(0.001)GSGSTAGSR 240.5 1.7311999999999998e-74 91657000.0 4368.1 4920.8 4693.8 4101.2 5893.7 4928.3 3715.2 4298.9 5670.3 7133.2 6380.0 True False 5105.3284902083105 5171.247701563833 5359.451420141635 5105.994184109864 5026.744537337182 5449.809434859227 4390.203749672262 4908.282239829098 4385.986103608443 5521.805165777447 4795.6699209577455 1.0645704509180904 1.0783160198254598 1.1175605303275953 1.0647092623693635 1.04818401186654 1.1364021137157085 0.9154516098963484 1.0234820829472064 0.9145721402636726 1.1514147672354156 1.0 12.227516648212976 -7.763400511416617 24.999999881571483 0.9614223095618867 1.083545319745881 0.18061495337360167 0.06854894934333905 23.184533470558037 295551.77843723557 0.006449446211091385 0.009156958569670729 1.7242470379011378e-08 7.763400511416617 0.12212301018399441 GYYSPYS(ph)VSGSGSTAGSR ddPTM_A549_PD325901_60min_R1 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.349)PYS(0.651)VSGSGSTAGSR;GYYS(0.083)PYS(0.917)VSGSGSTAGSR;GYYSPYS(0.5)VS(0.5)GS(0.001)GSTAGSR 293.77 3.3169999999999995e-133 115934000.0 19093.5 18961.4 18420.5 17780.4 21541.399999999998 21836.7 18416.600000000002 18965.8 22304.8 19353.9 22257.4 True False 21031.85806410819 20559.34372303908 19670.625901464984 18878.65492578176 20028.406377795654 21658.869155134806 19117.453790950214 18587.512240617736 21367.40682303138 18131.89145104277 19519.88090128342 1.0774583190579485 1.0532514940543165 1.0077226393410859 0.9671501082027862 1.0260516690180623 1.1095799848712575 0.9793837312651458 0.9522349206237021 1.0946484218367585 0.9288935492352625 1.0 14.252656630009062 -11.384230171990069 2.1036176907328383 0.999631001652853 1.0397029660336057 0.09253318180960524 0.05440275852903984 0.8094389067231266 6.474859851739639 0.04297679064072831 0.007960083843385927 4.128286486997948e-12 11.384230171990069 0.04007196438075267 GYYSPYSVS(ph)GSGSTAGSR ddPTM_A549_MK2206_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYS(0.001)PYS(0.009)VS(0.936)GS(0.04)GS(0.009)T(0.003)AGS(0.002)R;GYYSPYS(0.004)VS(0.926)GS(0.016)GS(0.016)T(0.016)AGS(0.021)R 78.95 0.00010193 17740000.0 1264.4 1613.8 1372.2 1552.6 1769.5 1682.8 1423.5 1323.0 2038.4 1970.9 2168.7 True False 1477.799808387946 1695.9355269028833 1566.798593616761 1932.9870696988621 1509.2088940424767 1860.8727790477642 1682.1315239175462 1510.5393015175748 1576.7056546559186 1525.6723211505016 1630.151936924933 0.9065411480451454 1.0403542691253935 0.961136540789149 1.1857711087625291 0.9258087297613501 1.1415333361858624 1.0318863449566953 0.9266248545930071 0.9672139258566084 0.9359080504044804 1.0 10.670790720549544 -8.096374460353386 24.97894126008072 0.9797197311959985 1.0320810189162377 0.12454657326510565 0.08149862887545523 88.04050391801893 22810.138309044327 0.011811929118529511 0.015249135821917063 8.009871329664856e-09 8.096374460353386 0.05236128772023918 GYYSPYSVS(ph)GSGSTAGSR ddPTM_A549_PD325901_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVS(0.999)GS(0.001)GSTAGSR 283.49 3.953599999999999e-116 26736000.0 3892.5 4004.0 4382.6 4016.9 4610.4 4921.1 3892.7 4016.2 5048.0 5034.0 5479.5 True False 4287.663734492952 4341.43113203922 4680.02959071472 4265.014789958196 4286.581409016552 4881.024193185506 4040.8388286671757 3936.09374035205 4835.850114892869 4716.1523808921875 4805.556237412383 0.8922304771115743 0.9034190669209445 0.9738788517923465 0.8875174026170072 0.8920052533449739 1.0157043122678677 0.840868076250632 0.8190714135667869 1.0063039273673755 0.9813957319187807 1.0 12.230487715559448 -8.807369449921929 24.968416025858073 1.0029769319601352 0.9062492093135673 0.38485712489537993 0.05193776405363773 83.75368380914553 45529.63484776526 0.008836270288097556 0.009406943321468839 1.5582263714342934e-09 8.807369449921929 -0.09672772264656782 GYYSPYSVSGS(ph)GS(ph)T(ph)AGSRTGSR ddPTM_A549_PD325901_60min_R1 1 GYYSPYSVSGSGSTAGSRTGSR 22 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 3 GYYS(0.001)PY(0.002)S(0.007)VS(0.159)GS(0.473)GS(0.473)T(0.473)AGS(0.473)RT(0.469)GS(0.469)R 44.586999999999996 0.015609 8640400.0 2211.3 2432.6 2253.7 2528.0 2061.2 1910.8 2044.5 2454.3 1882.2 2777.1 2387.5 True False 2435.7895481269793 2637.6037392104436 2406.6496345990413 2684.148818495436 1916.4284227539717 1895.239078323722 2122.304566293329 2405.3470611388984 1803.0976795268132 2601.753432057148 2093.852635609466 1.1633051470300748 1.2596892896632652 1.1493882585956334 1.281918685607094 0.9152642311889105 0.9051444433538501 1.0135883157200227 1.1487661644530036 0.8611387682505071 1.2425675942088663 1.0 11.031944194286748 -6.7658263642077054 24.99999309583341 0.9522362631447543 1.2122844197026692 0.3350972311021384 0.11843531545160801 49.62933021886886 282823.47214729403 0.012678669321904788 0.024562357233418947 1.7146427038193441e-07 6.7658263642077054 0.2600481565579149 GYYSPYSVSGS(ph)GSTAGS(ph)R ddPTM_A549_MK2206_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYSPYSVS(0.005)GS(0.726)GS(0.265)T(0.021)AGS(0.982)R 93.76799999999999 4.4304e-06 22383000.0 2979.4 3312.6 3466.9 2921.1 5225.8 3455.2 3909.1 3329.3 6297.9 5789.0 5168.9 True False 3482.249880663594 3481.197190741413 3958.558551384601 3636.7696311331624 4457.091742575401 3820.826970623864 4619.332869790008 3801.2384705536374 4871.435705679704 4481.26087936489 3885.319475617322 0.8962583135098083 0.8959873731331451 1.0188502068431946 0.9360284666308764 1.1471622270823 0.9834009776034669 1.1889197011414516 0.9783593072355201 1.253805700213546 1.1533828575712892 1.0 11.923817515711796 -6.329342220638775 0.7762157158101611 1.1129294355034813 0.8750004240772234 0.423978703684996 0.08964901450604912 0.7876782647906097 0.7147982260850422 0.017806375908586372 0.11846495025551251 4.684441063966728e-07 6.329342220638775 -0.23792901142625789 GYYSPYSVSGS(ph)GSTAGSR ddPTM_A549_MK2206_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVS(0.173)GS(0.207)GS(0.207)T(0.207)AGS(0.207)R;GYYSPYSVS(0.014)GS(0.461)GS(0.461)T(0.054)AGS(0.011)R 114.63 5.8106e-10 3191500.0 822.5 543.91 764.22 664.98 1079.9 614.43 799.81 783.9 1131.3 966.93 1179.3 True False 961.3178918056667 571.5926957725538 872.5978874900175 827.9001298520864 921.0481405348797 679.4485747743753 945.12512409167 895.0202255930664 875.0623563148749 748.4998414379498 886.4472629757794 1.0844614586304306 0.6448129738183552 0.9843765375965289 0.9339530555634501 1.039033204798835 0.7664850501015535 1.066194418513867 1.009671147935533 0.9871567016601916 0.8443816938700405 1.0 9.791890993818633 -7.0881742615521075 0.6250179810858567 0.9978716225570691 0.883436949478595 0.0 0.13043948692085522 1.4475468534368292 1.0289623933729775 0.022447280940105507 0.0781895163147499 8.162547817337231e-08 7.0881742615521075 -0.1144346730784741 GYYSPYSVSGSGS(ph)TAGS(ph)R ddPTM_A549_MK2206_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYSPYS(0.001)VS(0.006)GS(0.415)GS(0.545)T(0.052)AGS(0.981)R 120.63 3.4889999999999995e-10 25538000.0 2070.5 2966.3 2239.9 1885.0 4319.3 3078.9 2385.5 2500.4 4523.1 3468.1 3195.4 True False 2419.949781135119 3117.271999908305 2557.5515011238786 2346.825084620866 3683.9366917421107 3404.7071543915886 2818.9144715878483 2854.8393571538495 3498.625071906489 2684.6538012999426 2401.893991446455 1.0075173133173085 1.2978391265432323 1.064806153074093 0.9770727155229588 1.5337632322080923 1.4175093349316492 1.173621517696648 1.1885784165830835 1.4566109430165013 1.1177236842510296 1.0 11.229956763187136 -5.2486213324344995 22.636961934123782 1.2270924952392999 1.0075167774057716 0.10843839775793318 0.17702365062832784 1104.496461840898 1950428.983038313 0.028121802907767602 0.6273779670860441 5.64129313863996e-06 5.2486213324344995 -0.21957571783352825 GYYSPYSVSGSGS(ph)TAGS(ph)R ddPTM_A549_PD325901_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYSPYSVSGS(0.041)GS(0.738)T(0.221)AGS(1)R;GYYS(0.01)PYS(0.004)VS(0.02)GS(0.036)GS(0.892)T(0.076)AGS(0.962)R 154.46 1.9265000000000001e-22 106898000.0 9143.5 11319.9 10262.3 9484.4 12406.9 11928.6 11410.1 12821.3 12610.9 14008.1 13834.5 True False 10071.74138891106 12273.86770019251 10958.761390223079 10070.22984736477 11535.482145481405 11831.457436514731 11844.3175993463 12565.569113384734 12080.90772858606 13123.626175362699 12132.944204121119 0.8301151987075038 1.0116149463560151 0.9032235874373169 0.8299906171120675 0.9507570422654068 0.9751513925610913 0.9762113300845162 1.0356570426753193 0.9957111419405207 1.081652231690399 1.0 13.566642059709364 -7.192535139806891 2.491303313504295 0.9988352043702264 0.9025457608021844 0.49470090627269037 0.05403188789270189 0.1900617345305004 2.309567687018673 0.006832710324475193 0.012498653182036837 6.418962820409371e-08 7.192535139806891 -0.09628944356804203 GYYSPYSVSGSGS(ph)TAGSR ddPTM_A549_MK2206_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVSGS(0.001)GS(0.982)T(0.017)AGSR 234.36 1.5587999999999996e-65 145090000.0 5592.8 5204.5 4318.6 3467.1 7089.5 4435.1 4499.0 4576.9 8261.9 6992.1 7178.5 True False 6536.727909168071 5469.386819783158 4931.04241830152 4316.539655644034 6046.6439414038605 4904.4193382188905 5316.410064000726 5225.689591168397 6390.592841543238 5412.579753775652 5395.88033347887 1.2114293692932336 1.0136227050567106 0.9138531830861312 0.7999694931820409 1.120603788020893 0.9089192189436267 0.9852720474571928 0.9684591333031386 1.1843466583001574 1.003094846302126 1.0 12.397642638098201 -8.723818550395306 24.987531288747878 1.0870526541490655 0.9836208636829645 0.061720047728530125 0.11284046516647536 243.2174975055913 161543.47469040405 0.019912696811160466 0.022578617386747022 1.888780322644709e-09 8.723818550395306 -0.10343179046610096 GYYSPYSVSGSGS(ph)TAGSR ddPTM_A549_PD325901_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVSGS(0.001)GS(0.722)T(0.073)AGS(0.204)R;GYYSPYSVSGS(0.003)GS(0.867)T(0.078)AGS(0.052)R 213.02 1.6376999999999998e-55 663560500.0 8894.300000000001 8675.3 9728.0 8707.6 9506.6 10677.7 8941.9 8970.5 10006.0 11598.7 12674.8 True False 9797.242788362402 9406.397976967999 10388.200579216164 9245.44867560557 8838.889211989577 10590.744351380154 9282.188897695434 8791.576340278889 9585.482616802308 10866.356102553473 11115.87995217712 0.8813735692101953 0.8462126271097137 0.934536952891576 0.8317334044071596 0.7951587503658153 0.9527580719604556 0.835038605817028 0.79090241871108 0.8623233300504408 0.9775524879094456 1.0 13.440334538655947 -10.478802483528188 0.8308324074438728 0.9992534486466165 0.8588571197717023 0.5113924617407672 0.04854702790398006 0.3676342957919938 0.4614317987253318 0.030743311696419456 0.009132329492261077 3.3204543697863006e-11 10.478802483528188 -0.14039632887491416 GYYSPYSVSGSGS(ph)TAGSRT(ph)GSR ddPTM_A549_PD325901_60min_R1 1 GYYSPYSVSGSGSTAGSRTGSR 22 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYS(0.009)PY(0.014)S(0.005)VS(0.098)GS(0.358)GS(0.471)T(0.103)AGS(0.085)RT(0.541)GS(0.314)R 66.372 0.00048764 45404000.0 5658.6 4401.6 3712.2 3730.5 3961.1 3747.6 3157.2 3820.3 4515.4 5978.2 8265.7 True False 6233.056906358849 4772.538279416543 3964.132215272026 3960.924512419789 3682.8860010531557 3717.08078811282 3277.3489736861297 3744.1011195326287 4325.6334407264785 5600.7354317540085 7249.071300589387 0.8598421298259364 0.6583654762822531 0.54684690643748 0.5464044079822674 0.5080493553365544 0.5127664819368796 0.45210604749047845 0.5164939016709925 0.5967155324261719 0.772614201118237 1.0 12.823580463809625 -10.416167305565502 0.7692419734377068 1.0008926157207299 0.5683307790357512 0.45620309874118126 0.1215543211914781 0.30045070108568883 0.32217822321232237 0.07389846241715922 0.021886251065437658 3.835594563846462e-11 10.416167305565502 -0.4325618366849786 GYYSPYSVSGSGS(ph)TAGSRTGS(ph)R ddPTM_A549_MK2206_60min_R1 1 GYYSPYSVSGSGSTAGSRTGSR 22 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYS(0.001)PY(0.003)S(0.009)VS(0.15)GS(0.172)GS(0.487)T(0.292)AGS(0.284)RT(0.238)GS(0.363)R 46.63 0.004247600000000001 18343000.0 4948.7 5223.0 2805.7 3233.5 5276.8 4498.7 4036.6 4114.7 6693.4 6593.8 6814.2 True False 5783.91957590116 5488.828390763267 3203.590448994716 4025.7076451573325 4500.58971013469 4974.749448004627 4769.9979694032745 4697.971325740258 5177.355587163422 5104.2560004070165 5122.046077647378 1.1292205279335927 1.0716085539949607 0.6254513138753657 0.7859569367650812 0.8786702895499661 0.9712426191779973 0.9312680708241883 0.9172059865377269 1.0107983233023643 0.9965267635295204 1.0 12.32250451606181 -8.721611654305864 5.022756114330844 1.005240434279888 0.9058308104586005 0.08639834601266794 0.12657248267491503 0.34226472823556703 19.976276229907533 0.022598023645265898 0.025261380866417688 1.8984027122824174e-09 8.721611654305864 -0.09940962382128748 GYYSPYSVSGSGST(ph)AGS(ph)RTGSR ddPTM_A549_PD325901_60min_R1 1 GYYSPYSVSGSGSTAGSRTGSR 22 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 GYYSPYS(0.007)VS(0.252)GS(0.377)GS(0.137)T(0.609)AGS(0.54)RT(0.042)GS(0.035)R 78.08800000000001 7.693e-05 50740000.0 5275.5 5432.3 4368.1 3865.1 3806.4 4003.0 3477.3 4290.6 4872.2 6318.7 8014.2 True False 5811.06487638216 5890.098985658508 4664.545533519135 4103.838448721012 3539.051595367125 3970.4008951904216 3609.63055435157 4205.020617089414 4667.438377531897 5919.736203643908 7028.50420619953 0.8267854305694914 0.8380302284607178 0.663661199690931 0.5838850384554368 0.5035284167925069 0.5648998390992365 0.5135702346407754 0.5982810131038057 0.6640727871251692 0.8422469461457208 1.0 12.779001974826189 -10.367110351715372 0.7813024593551599 0.9962913759168917 0.6334101063104615 0.46083936633531153 0.11342616803370244 0.3637747226988357 0.41057104085566737 0.07424532243828903 0.02351555584281382 4.294272979088925e-11 10.367110351715372 -0.3628812696064302 GYYSPYSVSGSGST(ph)AGSR ddPTM_A549_MK2206_60min_R1 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVSGSGS(0.049)T(0.949)AGS(0.003)R;GYYSPYSVSGSGS(0.004)T(0.993)AGS(0.003)R;GYYSPYSVSGSGS(0.062)T(0.876)AGS(0.062)R 471.13 0.0 677030000.0 42844.0 45838.0 45607.0 36427.7 62538.0 45290.0 47485.0 47245.0 75180.0 69063.0 67012.0 True False 50075.01976476842 48170.95841007214 52074.75838731938 45352.48813530161 53338.74304358766 50082.55773893109 56112.409844204194 53942.123431744345 58151.85003779042 53461.62033366342 50371.070962887214 0.9941225947263078 0.9563219024182334 1.033822735785932 0.9003677561018459 1.0589161997942627 0.9942722436025095 1.1139808777452267 1.0708949085376454 1.1544692007965442 1.0613556414763006 1.0 15.620307784685334 -7.3478802100152105 1.674438390777247 1.0765761510554228 0.9785539754391592 0.406357383216424 0.05284290548823296 0.34239263783505536 1.8786001944353286 0.010323697496037534 0.01894975767532536 4.488691829351498e-08 7.3478802100152105 -0.09802217561626358 GYYSPYSVSGSGST(ph)AGSR ddPTM_A549_PD325901_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVSGSGS(0.069)T(0.862)AGS(0.069)R 316.58 9.005299999999995e-173 630120000.0 13047.0 14396.0 14257.0 13564.0 15298.0 15620.0 15618.0 15039.0 16854.0 18795.0 19227.0 True False 14371.52183530625 15609.201442766393 15224.565754305604 14401.81747392092 14223.521255234955 15492.795898794491 16212.351536497528 14739.035347132729 16145.684991363794 17608.28049242524 16862.20088999507 0.8522921728345303 0.9256918206939329 0.902881293706972 0.8540888326426012 0.8435151109885225 0.9187884784356296 0.9614611783042437 0.8740872821576874 0.9575075695453011 1.0442456834251599 1.0 14.041505231716435 -8.88074037439246 0.527960269176287 0.9974284841953667 0.8799126224463121 0.6482350958273448 0.036716807052915516 0.35434996196583407 0.22989800623059298 0.013350964146443687 0.011797231906559544 1.3160113218820743e-09 8.88074037439246 -0.1175158617490546 GYYSPYSVSGSGSTAGS(ph)R ddPTM_A549_PD325901_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 GYYSPYSVSGS(0.05)GS(0.204)T(0.147)AGS(0.599)R 162.59 6.252100000000001e-23 6695200.0 1408.8 1663.4 1709.6 1643.6 1874.1 1686.8 2003.2 1642.6 2256.0 1965.5 2251.6 True False 1551.820338896255 1803.5805557028073 1825.623736659947 1745.1214391135684 1742.4696812940124 1673.0632600567574 2079.4328721931015 1609.837054405228 2161.188165451329 1841.3979945656708 1974.6674740683882 0.785864131189164 0.9133591247071629 0.9245221084736015 0.8837545875600572 0.8824116992741158 0.8472632896564409 1.053054703893444 0.8152446300685231 1.0944567598506365 0.9325104194742503 1.0 10.94739401445673 -8.768198350898205 24.99996370477568 1.0446045847533427 0.8940262761777289 0.30265800526644193 0.07625705789941664 93.3574298439568 345307.8318691353 0.011798465697404871 0.012698577858588184 1.7053033652704764e-09 8.768198350898205 -0.15057830857561383 GYYSPYSVSGSGSTAGSR ddPTM_A549_MK2206_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 327.82 1.8073999999999995e-173 27133000.0 5328.8 6516.5 5470.8 4448.2 8020.5 7285.200000000001 5642.9 6252.1 10038.5 8319.1 8557.7 False True 6228.171163348375 6848.162015778067 6246.641703803074 5538.009199687286 6840.695074692101 8056.115028475625 6668.141887119295 7138.354321253232 7764.795778190459 6439.809532134124 6432.5869094953205 0.9682218446446169 1.0646046624988936 0.9710932462618161 0.8609303344992474 1.0634438634003314 1.252391167320844 1.0366190120612695 1.1097175089412485 1.2071031277834159 1.001122817731097 1.0 12.65118332873945 -6.987297277354624 24.73169281850474 1.1077242200438442 0.9721638621497626 0.35312852001508876 0.0851564700276603 195.1612218147011 379968.3090719096 0.013766907813480816 0.026005957450948688 1.0296810558804363e-07 6.987297277354624 -0.1355603578940816 GYYSPYSVSGSGSTAGSR ddPTM_A549_PD325901_60min_R1 4 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ;;; 273.3 1.3375999999999996e-100 23898000.0 8156.299999999999 7922.5 7886.9 7972.2 9809.4 9089.7 8884.3 8951.4 10657.099999999999 10628.5 11014.5 False True 8984.321571649287 8590.156879016171 8422.152461782482 8464.624687820147 9120.421584592863 9015.676496880433 9222.396898175497 8772.857304762543 10209.21914806355 9957.41469612884 9659.786326668258 0.9300745656087462 0.8892698646243233 0.8718777183022177 0.876274526326885 0.9441639055114145 0.9333204888798007 0.9547205897002878 0.9081833705309686 1.056878361778919 1.0308110717355006 1.0 13.237775561832303 -8.753646813528778 24.999869430374755 1.0268592273654842 0.9131093937522123 0.770926777660315 0.028090466464133653 67.86621291136966 217726.04155356128 0.005718857016823485 0.006426329187077768 1.763409541976181e-09 8.753646813528778 -0.11374983361327184 HAAFVT(ph)PDQK ddPTM_A549_MK2206_60min_R1 2 HAAFVTPDQK 10 0 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 HAAFVT(1)PDQK;HAAFVT(1)PDQK 89.40299999999999 0.00060861 16978000.0 3058.7 3339.7 3580.0 2665.9 4537.1 2802.1000000000004 2978.1 3192.7 4538.6 4244.9 3591.4 True False 3574.933781964733 3509.6764649879533 4087.697832056554 3319.0456196767977 3869.6986002600274 3098.6163621165592 3519.182220849204 3645.275002233678 3510.6143466549 3285.974141788913 2699.5562624024533 1.3242671885575903 1.3000938390758112 1.5142110164500637 1.2294782168099856 1.4334572885753503 1.1478243314547425 1.303615068099129 1.350323774689396 1.3004412597537978 1.2172275079255361 1.0 11.39850656947784 -11.117775011883186 0.37598019026815904 0.8361517842482253 1.345395947455419 0.27481288416924 0.1115947221930306 1.4984495255948622 0.21498434685288645 0.316598802548238 0.02748878122445764 7.624739106023441e-12 11.117775011883186 0.5092441632071936 HAAFVT(ph)PDQK ddPTM_A549_PD325901_60min_R1 2 HAAFVTPDQK 10 0 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 HAAFVT(1)PDQK;HAAFVT(1)PDQK 77.593 0.0012385 21520000.0 2768.2 3295.2 3861.3 4065.8999999999996 4311.4 4248.7 3819.5 4642.2 4565.8 3740.6000000000004 3505.7 True False 3049.2256261588655 3572.8980685054057 4123.351037883159 4317.041408671121 4008.58213752255 4214.099995851998 3964.8531626105987 4549.607679264552 4373.915303997197 3504.417877625211 3074.5211244632897 0.9917725404118536 1.1620990469301513 1.3411360244281816 1.404134573778456 1.303806991478166 1.370652477330967 1.2895839716511077 1.4797776613288887 1.4226330302936978 1.1398255974699043 1.0 11.586146004004062 -10.871086746081293 1.140155377103415 1.0014380828024463 1.320690483303159 0.30058220927171064 0.13355609942619903 0.37039652385682 0.8610714148545816 0.09213528674311967 0.022705380687864894 1.3455915584398982e-11 10.871086746081293 0.3192524005007127 HADDDRPPRR ddPTM_A549_MK2206_60min_R1 2 HADDDRPPRR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 81.33800000000001 0.00037489 22328000.0 608.98 610.23 961.96 632.38 939.78 708.8 1003.94 646.71 1121.02 898.8599999999999 1018.92 False True 711.7609358684686 641.2881004969311 1098.3803928841126 787.3131283886173 801.5396069190379 783.8047455366391 1186.342902790152 738.3831229663114 867.1107599010875 695.8069017146175 765.8940432386001 0.9293203702940049 0.8373065519418716 1.434115335640406 1.0279661205608104 1.046541116222434 1.0233853526557057 1.5489647860083549 0.9640799918537579 1.1321549861316196 0.9084897680786006 1.0 9.581001007685291 HADDDRPPRR ddPTM_A549_PD325901_60min_R1 3 HADDDRPPRR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;; 76.465 0.00049016 34153700.0 770.13 1156.8 1303.5100000000002 1322.8 1723.5 1644.95 1353.1999999999998 1601.1599999999999 1668.8899999999999 1385.54 1068.03 False True 848.3130306602587 1254.287595789953 1391.9740272424 1404.506351703229 1602.4473057522175 1631.5540725814337 1404.6967664994522 1569.2236077142788 1598.7523570213073 1298.056767942265 936.6690807999904 0.905669940482856 1.339093626020719 1.4860894373213887 1.499469108667138 1.710793425980923 1.741868185921068 1.4996723979612188 1.6753233771462128 1.7068486510260856 1.385822159127555 1.0 9.871395632736263 -10.882980700209078 1.1354105055492842 1.0003648287217315 1.5326352583807124 0.1256854731567133 0.25080038399191557 0.3942683904353126 0.9035223622552107 0.16423051417536047 0.03961763734961081 1.3092401035655381e-11 10.882980700209078 0.5322704296589809 HADDHT(ph)PK ddPTM_A549_MK2206_60min_R1 1 HADDHTPK 8 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HADDHT(1)PK 43.512 0.033079000000000004 1639100.0 314.54 330.71 325.8 139.13 387.53 727.02 583.71 582.36 527.86 424.46 423.75 True False 367.62666223532483 347.5417264233812 372.0033390178845 173.216856245783 330.5248503578868 803.9527738431818 689.7625513353776 664.9113134027021 408.3005528192077 328.5741911997273 318.52118009496 1.1541670859241608 1.0911102562152046 1.1679077005396625 0.5438158184461775 1.0376856266178223 2.5240166873785324 2.165515496111562 2.0874948196677963 1.2818631172265593 1.0315615153182913 1.0 8.315245497584451 -7.03273352991871 24.99810065875948 1.4043865646259415 0.9819695478205546 0.21954742282219042 0.5121416822811445 1198.1668252036227 915020.2474270093 0.08941561136789343 0.1549527520581179 9.273986728849465e-08 7.03273352991871 -0.4224170168053869 HADGEKEDQFNGS(ph)PPRPQPR ddPTM_A549_MK2206_60min_R1 6 HADGEKEDQFNGSPPRPQPR 20 2 Q69YN4;Q69YN4-3;Q69YN4-4;Q69YN4-2 Q69YN4 KIAA1429 Protein virilizer homolog 1 HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR 291.91 1.9567999999999996e-144 438140000.0 30931.4 42340.7 39665.7 37563.899999999994 63593.100000000006 49203.50000000001 44344.299999999996 45765.5 69188.8 64001.6 51751.0 True False 36151.86411987577 44495.66077824817 45290.892708660824 46767.057186307546 54238.6392312702 54410.18171136005 52401.08530808344 52252.89977596563 53517.6472718099 49543.594108958314 38899.79844506025 0.9293586487584119 1.1438532474941017 1.1642963336333727 1.2022442032021976 1.3943167162645742 1.398726571506681 1.3470785814505337 1.343269165000032 1.3757821225576534 1.2736208435354934 1.0 15.247475059617848 -5.089333912388955 1.2813712812249662 1.2357418867103296 0.6998112486640757 0.40282548090311643 0.11898716262495464 2.42146363380179 2.5400266189757668 0.02460550636923822 1.880371774475544 8.14078129852671e-06 5.089333912388955 -0.5359306380462538 HADGEKEDQFNGS(ph)PPRPQPR ddPTM_A549_PD325901_60min_R1 2 HADGEKEDQFNGSPPRPQPR 20 2 Q69YN4;Q69YN4-3;Q69YN4-4;Q69YN4-2 Q69YN4 KIAA1429 Protein virilizer homolog 1 HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR 252.21 4.6960999999999994e-98 384400000.0 22680.8 28271.0 33137.0 33557.0 39337.0 36832.0 36060.0 38516.0 41290.0 33079.0 31287.0 True False 24983.33811927751 30653.49638708312 35385.87608896855 35629.73967652348 36574.10482528283 36532.05240361067 37432.28303278914 37747.768164782516 39554.72488984282 30990.386294702526 27438.89734463389 0.9105080938743844 1.1171548186530134 1.2896245663417236 1.2985120804605306 1.3329291030142463 1.3313965187728323 1.3642050758322333 1.3757028094339472 1.441556648324222 1.12943264102277 1.0 14.743934886300998 -5.412086756257083 2.5071031329532354 1.2603810774185817 0.8866208286502535 0.46444145442632045 0.11894853412039591 0.39176237265702957 3.745937777956783 0.023837715803927753 0.26649402360661684 3.871802926417905e-06 5.412086756257083 -0.37376024876832825 HAEAT(ph)LGSGNLR ddPTM_A549_MK2206_60min_R1 4 HAEATLGSGNLR 12 0 D6RCK3;Q9H8S9-2;Q9H8S9;Q7L9L4;Q7L9L4-2 D6RCK3 MOB1B;MOB1A MOB kinase activator 1A;MOB kinase activator 1B 1 HAEAT(0.994)LGS(0.006)GNLR;HAEAT(0.989)LGS(0.011)GNLR;HAEAT(0.997)LGS(0.003)GNLR;HAEAT(0.999)LGS(0.001)GNLR 223.22 4.821000000000001e-40 354887000.0 19092.399999999998 21809.3 23426.1 22724.3 27597.5 22568.3 20661.6 22395.199999999997 32905.7 34579.6 29053.7 True False 22314.73035563589 22919.30021494799 26748.273235625733 28291.754520132607 23537.94430818718 24956.462526374904 24415.54527191764 25569.788182423574 25452.6114896052 26768.04434342478 21838.86444867243 1.0217898649484216 1.0494730744272394 1.2248014679742996 1.2954773626910094 1.0778007420444444 1.1427545871274452 1.1179860257524445 1.1708387238961018 1.1654732117334263 1.225706785549099 1.0 14.414610222214714 -10.742101830203712 0.8924761937786931 0.995922975387436 1.1443880065164347 0.0 0.09909465305109384 0.600895043309447 0.8127895346328774 0.06000847506046842 0.013830321431883145 1.8109154325885537e-11 10.742101830203712 0.14846503112899867 HAEAT(ph)LGSGNLR ddPTM_A549_PD325901_60min_R1 2 HAEATLGSGNLR 12 0 D6RCK3;Q9H8S9-2;Q9H8S9;Q7L9L4;Q7L9L4-2 D6RCK3 MOB1B;MOB1A MOB kinase activator 1A;MOB kinase activator 1B 1 HAEAT(0.993)LGS(0.007)GNLR;HAEAT(0.998)LGS(0.002)GNLR 202.27 4.0305e-57 80121000.0 6715.5 8236.6 8580.6 10259.0 11214.0 10879.0 10489.0 12217.0 11783.0 10056.0 8007.7 True False 7397.252616310188 8930.727188350218 9162.931115339461 10892.675130120524 10426.36732619981 10790.405030920956 10888.16463480103 11973.322350948903 11287.80148648626 9421.062443832305 7022.803664992638 1.053319011776466 1.2716754752618562 1.304739752446015 1.5510436642873089 1.4846445698280446 1.5364810901248893 1.5504014000955906 1.70492055909717 1.6073069994472204 1.341495917192522 1.0 12.777831387282857 -10.850871820686892 1.128426110236228 1.0031322566352494 1.468018805980747 0.16039998375342002 0.19851931584685203 0.35604187405972787 0.8134287345725093 0.1272675476846354 0.03194426605099462 1.4097048026262461e-11 10.850871820686892 0.46488654934549767 HAELSGS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 HAELSGSPLK 10 0 F6RRE2;E7EV10;Q9BTC8 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 HAELS(0.002)GS(0.998)PLK;HAELS(0.004)GS(0.996)PLK 85.845 0.00024752 26340300.0 2794.6 3120.4 3249.3 3382.2 4332.9 3864.1000000000004 3572.2 3898.1 4246.0 3655.1000000000004 3447.9 True False 3078.3057347242157 3383.367059044753 3469.8170376281964 3591.1108124664815 4028.5720516935194 3832.6320507382743 3708.142025782846 3820.349337499708 4067.5553858627413 3424.316362216733 3023.830158038902 1.0180154221097668 1.1189011558899948 1.1474907174940467 1.1876033456837696 1.3322745793058166 1.2674759660522463 1.226306317477749 1.2634139941171123 1.3451666175922872 1.1324433527171267 1.0 11.562161393455105 -5.4485559797336425 1.4746821240145622 1.197847211348836 0.9874986334269339 0.28976130097655595 0.09254732776609777 1.2949160368583008 3.289292670697561 0.019424248147381376 0.3569875536709126 3.5599509998638364e-06 5.4485559797336425 -0.2103485779219022 HAEPLTDTGSET(ph)PTAR ddPTM_A549_MK2206_60min_R1 2 HAEPLTDTGSETPTAR 16 0 Q86X53 Q86X53 ERICH1 Glutamate-rich protein 1 1 HAEPLTDT(0.002)GS(0.039)ET(0.799)PT(0.16)AR;HAEPLTDT(0.003)GS(0.06)ET(0.763)PT(0.173)AR 89.859 9.8508e-06 9378000.0 900.46 904.5 935.5699999999999 1037.3500000000001 1503.5 1116.27 1085.45 1138.99 1693.42 1777.1599999999999 1737.28 True False 1052.4356338666635 950.5351865681359 1068.2478940606568 1291.5007965684108 1282.3371416744073 1234.392950479943 1282.6622147076216 1300.4453205105838 1309.86307383606 1375.6983217087757 1305.8654295112037 0.8059296234379977 0.7278967381224949 0.8180382678945034 0.988999913300278 0.981982609153224 0.9452681130719469 0.9822315421794516 0.9958494122915492 1.0030612988402279 1.0534763311895858 1.0 10.350790518315305 -6.191896945530414 3.3509394340303986 0.9941969504731907 0.7674334474458239 0.9100350631629904 0.029618045797438933 0.038834442982833804 0.8542819240560672 0.0033372774554205845 0.00959380789687493 6.42840239864121e-07 6.191896945530414 -0.2267635030273668 HAEPLTDTGSET(ph)PTAR ddPTM_A549_PD325901_60min_R1 2 HAEPLTDTGSETPTAR 16 0 Q86X53 Q86X53 ERICH1 Glutamate-rich protein 1 1 HAEPLT(0.001)DT(0.022)GS(0.219)ET(0.645)PT(0.113)AR;HAEPLTDT(0.009)GS(0.177)ET(0.637)PT(0.177)AR 74.77600000000001 0.00047323 14183900.0 1299.85 807.04 1103.5 1242.37 1518.23 1085.07 1090.97 915.66 1440.72 1262.27 1568.21 True False 1431.809815101005 875.0520931071258 1178.390145884564 1319.1083732730121 1411.594762409161 1076.2335496738117 1132.4874603516912 897.3964429786257 1380.171548638759 1182.5700567796544 1375.33011170225 1.0410662886809408 0.636248770867142 0.8568053123086697 0.959121277174938 1.0263679609704945 0.7825274386974298 0.8234295539054317 0.6524953066489002 1.0035201999107812 0.8598445178488705 1.0 10.42556222573976 -8.899385808295463 21.073952010016757 1.0017248785071198 0.8460751948924862 0.08824338367084328 0.13129246163441638 4.117689334135029 852.4415208828884 0.020868401128679718 0.022215871192981646 1.2607070797422297e-09 8.899385808295463 -0.1556496836146336 HAHGDQYK ddPTM_A549_PD325901_60min_R1 2 HAHGDQYK 8 0 P48735-2;P48735 P48735-2 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial 0 ; 63.486000000000004 0.010608 1899810.0 735.91 675.13 484.29999999999995 716.45 741.31 745.31 662.26 492.64 708.45 783.39 622.6600000000001 False True 810.6190414516909 732.0255744689415 517.1675103324822 760.7034893239938 689.2429429806656 739.2404424667432 687.4626667025774 482.8139087313962 678.6763102012382 733.9266217058257 546.0767673669488 1.4844415472211012 1.3405177041290242 0.9470600861233116 1.3930339739445858 1.2621722515389726 1.3537298904532842 1.2589121306466808 0.8841502469687715 1.2428221648645712 1.3439989861583816 1.0 9.092959968968376 -14.999999995280177 0.06717760789264592 0.16875987357090527 1.5659931507178495 0.02318543729306899 0.18523930092086896 219.97625850192634 1.1091166017073755 29.42317993219238 4.283017210062984 1.0000000108677936e-15 14.999999995280177 1.3972332771469442 HAIMRS(ph)PQMVSAIVR ddPTM_A549_MK2206_60min_R1 5 HAIMRSPQMVSAIVR 15 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y7Z0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 HAIMRS(0.994)PQMVS(0.006)AIVR;HAIMRS(0.999)PQMVS(0.001)AIVR;HAIMRS(0.999)PQMVS(0.001)AIVR;HAIMRS(1)PQMVSAIVR;HAIMRS(1)PQMVSAIVR 65.092 0.0011806 16373300.0 1809.27 1986.51 1842.83 1885.3100000000002 2440.0699999999997 2181.76 1831.54 1577.046 3086.7900000000004 2689.16 2763.98 True False 2114.630543595427 2087.61487392976 2104.1710044270335 2347.211034634783 2081.138935341182 2412.6323950649235 2164.3071101622345 1800.5971000008199 2387.6369935907283 2081.6768882972665 2077.607484032727 1.0178200453392845 1.0048167856411492 1.0127856299125115 1.1297663551340045 1.0016997682842383 1.1612551521916443 1.0417305130039385 0.8666685665310476 1.1492242937805657 1.0019586973457761 1.0 11.020707400728595 -6.054252730529688 24.98971595868325 1.0604018050361468 1.0106886886060003 0.0017475260114243607 0.08053722871563535 689.3288653766934 317515.99555978016 0.011714845921894625 0.0309948357910253 8.825661560940253e-07 6.054252730529688 -0.04971311643014653 HAIMRS(ph)PQMVSAIVR ddPTM_A549_PD325901_60min_R1 4 HAIMRSPQMVSAIVR 15 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y7Z0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 HAIMRS(1)PQMVSAIVR;HAIMRS(1)PQMVSAIVR;HAIMRS(0.998)PQMVS(0.002)AIVR;HAIMRS(0.996)PQMVS(0.004)AIVR 84.035 5.934100000000001e-05 18046600.0 1299.83 1750.89 1748.0800000000002 1492.41 1791.01 1644.96 1794.3799999999999 1892.04 2306.35 2086.3300000000004 1533.56 True False 1431.7877847157292 1898.4436450489884 1866.7152208589848 1584.5927761909722 1665.2156362490734 1631.5639911447488 1862.6661128224125 1854.3017779233346 2209.422130048169 1954.598767744695 1344.941842037802 1.0645722662225616 1.4115432992794266 1.3879523727439491 1.1781868380197473 1.2381320769424538 1.2131111845495628 1.3849417533178798 1.3787226480468262 1.6427640668094177 1.4532961252682608 1.0 10.393328073787691 -7.7528336674966765 24.651894924175274 1.323624297605763 1.258923139751957 0.08383840056813208 0.16974751596460633 782.6718698880106 2242025.2049096404 0.03744422638217776 0.05504766656743855 1.766714333428921e-08 7.7528336674966765 -0.06470115785380615 HAIPS(ph)AERGPGLLESPSIFNFTADR ddPTM_A549_MK2206_60min_R1 1 HAIPSAERGPGLLESPSIFNFTADR 25 1 Q92615 Q92615 LARP4B La-related protein 4B 1 HAIPS(1)AERGPGLLESPSIFNFTADR 76.16199999999999 2.4794e-06 1072400.0 0.0 301.24 200.79 289.58 562.36 243.11 331.11 287.59 499.63 356.02 413.4 True False 0.0 316.5718292999287 229.26504125660213 360.5271129997402 479.6375889537874 268.8357388366426 391.26840104273856 328.35676320743687 386.4646027451613 275.59483473337144 310.7413707404285 0.0 1.0187630586349268 0.7378001864068303 1.1602160090260372 1.5435266563023655 0.8651430551267312 1.2591448641371177 1.0566882756069291 1.2436857114464706 0.8868945711241777 1.0 8.279570518098831 -5.2903540491386885 3.868824696652694 1.1129760804527975 1.175380037762407e-53 0.6761213522648439 0.2133665923392886 0.09243982906685952 2.6771812348694866 0.027209567070738773 0.2747073643713762 5.12443455269892e-06 5.2903540491386885 -1.1129760804527975 HAIPS(ph)AERGPGLLESPSIFNFTADR ddPTM_A549_PD325901_60min_R1 1 HAIPSAERGPGLLESPSIFNFTADR 25 1 Q92615 Q92615 LARP4B La-related protein 4B 1 HAIPS(0.985)AERGPGLLES(0.013)PS(0.001)IFNFTADR 45.836000000000006 0.0084554 1959500.0 225.49 375.72 420.43 417.85 387.09 529.68 408.14 239.49 546.41 315.78 600.45 True False 248.3815788030355 407.38324298945463 448.9629080509719 443.65964549379675 359.90213378800445 525.366461694844 423.6719910427778 234.71318407372948 523.4462878919597 295.84159690864794 526.5984565661586 0.4716716802071188 0.7736126794710297 0.8525716368000159 0.8425008466352353 0.6834469970437306 0.9976604662319974 0.8045446881964993 0.44571567035013054 0.9940140943542571 0.5617973110627229 1.0 9.040559482697606 -4.111823664934324 0.09195468132770111 1.2190488137258952 7.156499210093723e-12 0.0 0.21723306123711433 71.78005876665664 0.7287659323287995 1.849621518912684 11.420224049256792 7.72994377584061e-05 4.111823664934324 -1.2190488137187387 HALEHPEPGAEHNGLEGPNDS(ph)GRETPQPVPAQ ddPTM_A549_MK2206_60min_R1 2 HALEHPEPGAEHNGLEGPNDSGRETPQPVPAQ 32 1 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 HALEHPEPGAEHNGLEGPNDS(0.5)GRET(0.5)PQPVPAQ;HALEHPEPGAEHNGLEGPNDS(0.5)GRET(0.5)PQPVPAQ 93.569 1.3407e-08 20059400.0 1116.59 1520.34 1515.19 1369.4 1954.8400000000001 1366.75 1501.1 1100.74 2120.9 2152.44 2116.85 True False 1305.0430939954897 1597.718812102819 1730.0667257412783 1704.9030614747026 1667.2856255608904 1511.378577824776 1773.8304394468753 1256.7732658748714 1640.5195363813466 1666.202309065497 1591.1777229121321 0.8201743118971234 1.004110847642283 1.0872869201404827 1.0714724300906082 1.0478311765887895 0.9498490055898282 1.114790896016604 0.789838399430805 1.0310096180701362 1.0471503497522934 1.0 10.635879267813419 -5.2643313900040765 5.893173731751606 1.0129226245989174 0.814886435891704 0.3111522646512048 0.08310732014571835 0.11235627270136198 17.883780783963022 0.01032223483607563 0.08908551719446044 5.440873265658485e-06 5.2643313900040765 -0.1980361887072134 HALTS(ph)PSLGGQGR ddPTM_A549_MK2206_60min_R1 2 HALTSPSLGGQGR 13 0 M0QZ22;Q5PRF9;M0QX45 M0QZ22 SAMD4B Protein Smaug homolog 2 1 HALT(0.124)S(0.87)PS(0.006)LGGQGR;HALT(0.104)S(0.894)PS(0.002)LGGQGR 57.53 0.004111600000000001 19288000.0 3472.8 3980.5 2716.5 2834.4 4532.2 3151.4 3343.6 3417.7 5155.6 4768.0 5154.7 True False 4058.9237381917605 4183.090447909858 3101.740547704367 3528.828127241052 3865.519383769036 3484.8790562699837 3951.08883974057 3902.16944126728 3987.8648318014384 3690.905488480186 3874.6457275173843 1.0475599638350548 1.079605915503946 0.8005223614835508 0.910748588491493 0.9976445991736653 0.8994058557459039 1.0197290584995407 1.007103543313502 1.0292205048528649 0.9525788286314044 1.0 11.919848690398835 -7.802095888515677 24.969427276938735 1.013944807059201 0.95431736476694 0.07744587204310893 0.07330442410846831 227.32720220285543 139613.49387426954 0.011156155657996346 0.015414545143118028 1.577262985043648e-08 7.802095888515677 -0.059627442292261024 HALYPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 HALYPPSPR 9 0 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 HALY(0.022)PPS(0.978)PR;HALY(0.007)PPS(0.993)PR 63.727 0.0020277 14460100.0 1303.81 4257.5 1954.19 5884.1 2895.5 2234.69 2490.2 2351.0 6077.5 3088.8 2443.98 True False 1436.171831385807 4616.294466697548 2086.8130848991 6247.54749323932 2692.130068932721 2216.491425549109 2584.9659236897264 2304.1074606761804 5822.083810075556 2893.7726408620942 2143.3859536656855 0.6700481679137728 2.153739254847041 0.9736058414165527 2.9148028531933643 1.256017407564212 1.0341074698928563 1.206019811443122 1.07498486529485 2.716302120072424 1.350094058381354 1.0 11.065675940231634 HAPEHHPGHGDRLS(ph)PGER ddPTM_A549_PD325901_60min_R1 1 HAPEHHPGHGDRLSPGER 18 1 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 HAPEHHPGHGDRLS(1)PGER 58.015 0.023369 13635000.0 324.47 208.48 281.93 479.59 469.93 223.89 237.07 264.81 513.39 440.64 451.35 True False 357.40995553781096 226.04934126062366 301.06346518281407 509.21318507208326 436.9237379704901 222.0667140704929 246.0918285796817 259.5281568105739 491.8140036618166 412.8179151999073 395.83681134338525 0.9029224804151949 0.571067002317093 0.7605747028960476 1.2864220064423086 1.1037976394556752 0.5610057167670841 0.6217002096002613 0.6556443195108382 1.242466565938386 1.0428992538589117 1.0 8.628761973643405 -8.76443278566616 24.998620048968302 1.1144981023270502 0.8097989824673559 0.24971830487723123 0.22101993197793005 81.1045819820407 677320.8743731295 0.041804193678950115 0.04544800446708727 1.7201535431652721e-09 8.76443278566616 -0.3046991198596942 HAPHCLS(ph)EEEGEQDRPR ddPTM_A549_MK2206_60min_R1 3 HAPHCLSEEEGEQDRPR 17 1 E9PH18;A0A0J9YX62;O75190-3;O75190;O75190-4 E9PH18 DNAJB6 DnaJ homolog subfamily B member 6 1 HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR 145.91 9.815299999999999e-17 276434000.0 1000.22 1269.59 626.77 1305.6799999999998 1961.4599999999998 1379.67 1345.26 1402.79 1956.5 1928.2200000000003 1619.52 True False 1169.0326829688322 1334.2067081426646 715.6554106698568 1625.5716586142028 1672.9318323303496 1525.6657636491746 1589.6763286725097 1601.6397783642003 1513.355873888493 1492.6337627930493 1217.3484875218642 0.9603106217748809 1.0959940574277844 0.5878804779449017 1.3353379704141677 1.3742423385565696 1.253269527409482 1.305851483751039 1.3156789487820628 1.2431574765983455 1.2261351437923735 1.0 10.249526508794743 -6.284669100872756 24.997107362007064 1.1853395992752445 0.9028548478368262 0.4923157429597417 0.1576764592500349 666.0846802162497 716761.2516256988 0.02557533484092025 0.0594643426781098 5.191954754443728e-07 6.284669100872756 -0.2824847514384182 HAPHCLS(ph)EEEGEQDRPR ddPTM_A549_PD325901_60min_R1 3 HAPHCLSEEEGEQDRPR 17 1 E9PH18;A0A0J9YX62;O75190-3;O75190;O75190-4 E9PH18 DNAJB6 DnaJ homolog subfamily B member 6 1 HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR 71.07300000000001 0.00046573 297206000.0 1585.29 1767.92 2055.14 1424.9699999999998 1971.36 2132.56 1421.71 2142.8999999999996 2100.51 1772.1799999999998 2225.33 True False 1746.2274737711841 1916.9088229157792 2194.614158960763 1512.9871605583244 1832.8984744227978 2115.1931384080153 1475.8139520395634 2100.1581784274717 2012.2328694202884 1660.2842523578697 1951.6285175291366 0.8947540262334346 0.9822098855896437 1.1245040432895799 0.7752434169561352 0.9391636051431257 1.0838093004943175 0.7561961401896407 1.076105498338578 1.0310532211160144 0.8507173560160292 1.0 10.930462754098961 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAK ddPTM_A549_MK2206_60min_R1 4 HAPSPEPAVQGTGVAGVPEESGDAAAIPAK 30 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK 167.74 1.1951999999999999e-57 470223000.0 6287.9 7460.2 7833.700000000001 6340.2 12562.699999999999 9214.3 7893.1 9700.5 12706.699999999999 12286.1 10169.2 True False 7349.143795604688 7839.892314909469 8944.636454464086 7893.54928462239 10714.743471708054 10189.351110042682 9327.17410005871 11075.575581535324 9828.652738430315 9510.661476932966 7643.9069843579255 0.9614381507576656 1.0256394185529203 1.170165528278654 1.03265899242041 1.401736506427161 1.3330030220008713 1.220210308569339 1.448941700127929 1.2858153243548271 1.2442147054372934 1.0 12.900094507506235 -5.674341749629798 1.3814180041937945 1.1946173276631897 0.9366860679655399 0.2965845817952312 0.1351807590615848 0.9069110884966682 2.4742488519692225 0.02445585428212095 0.2626971089485103 2.1166948364626184e-06 5.674341749629798 -0.25793125969764985 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAK ddPTM_A549_PD325901_60min_R1 3 HAPSPEPAVQGTGVAGVPEESGDAAAIPAK 30 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK 146.6 2.0737e-36 668583800.0 6052.37 5671.0599999999995 6634.4 7150.700000000001 7116.469999999999 7160.799999999999 6794.4 7606.3 7645.099999999999 7258.47 7170.5 True False 6666.802146880695 6148.980128786804 7084.650279888133 7592.382498582015 6616.633697688702 7102.4848189556715 7052.964610038344 7454.586379473085 7323.803033551402 6800.16896546176 6288.573957544576 1.0601453035123087 0.9778019898151477 1.1265909135708712 1.2073297618569347 1.052167588766376 1.1294269363620386 1.1215523038536754 1.185417620878834 1.1646206410222517 1.0813531034811812 1.0 12.61851718290655 -5.7685111571411065 24.996100380249636 1.10210868689042 1.0189736421439415 0.2546466908292291 0.06059150230253256 209.1380536201321 739237.8132019853 0.01067294831336227 0.03422978170729974 1.7040755405979243e-06 5.7685111571411065 -0.08313504474647848 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAKK ddPTM_A549_MK2206_60min_R1 5 HAPSPEPAVQGTGVAGVPEESGDAAAIPAKK 31 1 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK 196.19 2.848699999999999e-78 236573700.0 10115.61 13408.980000000001 14670.480000000001 13364.020000000002 20912.579999999998 15984.239999999998 14710.69 15210.09 23095.600000000002 20713.97 17958.099999999995 True False 11822.87766508003 14091.439807615709 16750.97466235448 16638.205499933654 17836.3671847272 17675.68166732021 17383.431954744356 17366.16683644705 17864.483476094607 16034.66979052305 13498.608151653816 0.8758590168891983 1.043917983935941 1.2409408788047673 1.2325867462042879 1.3213486149341949 1.3094447567288356 1.2877943977220037 1.2865153682025647 1.323431517930676 1.18787578766471 1.0 13.720523037475425 -5.492156612026232 2.8080280378148443 1.2048487145023739 0.8764088916537583 0.5722573988090671 0.09430451518555419 0.2602326682669531 3.607642097602808 0.01935313650618076 0.1512850387927785 3.2199074429701813e-06 5.492156612026232 -0.3284398228486155 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAKK ddPTM_A549_PD325901_60min_R1 4 HAPSPEPAVQGTGVAGVPEESGDAAAIPAKK 31 1 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK 217.86 2.0284999999999992e-91 410288400.0 7184.49 10306.32 9486.48 9740.06 12772.900000000001 10843.800000000001 11599.9 12200.8 11014.0 11201.7 9795.55 True False 7913.854135858 11174.869756433192 10130.289579638416 10341.681384918771 11875.775568112856 10755.491688050437 12041.340542208834 11957.445472657555 10551.119882216732 10494.422750305923 8590.759449107569 0.9212054164408144 1.3008011483308461 1.1792076870096482 1.203814569152334 1.382389489365407 1.2519838032675616 1.4016619384517537 1.3918962046946532 1.2281940781513572 1.221594297043914 1.0 13.068569960266842 -10.250193411987901 0.9123722714747349 1.015147705040175 1.2586218903747477 0.05968895333526347 0.14197103423682048 0.4357408219873638 0.7094632769747784 0.05943958517218081 0.02413935948240347 5.6209094361075665e-11 10.250193411987901 0.24347418533457277 HAQDSDPRS(ph)PTLGIAR ddPTM_A549_MK2206_60min_R1 3 HAQDSDPRSPTLGIAR 16 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 HAQDS(0.003)DPRS(0.964)PT(0.033)LGIAR;HAQDS(0.002)DPRS(0.986)PT(0.012)LGIAR;HAQDS(0.03)DPRS(0.812)PT(0.157)LGIAR 129.2 2.1781000000000002e-10 179909000.0 4425.76 5514.4 4965.0599999999995 4987.0599999999995 5641.0 5401.5 4824.4 5380.8099999999995 8196.7 7444.6 6733.6 True False 5172.720088556654 5795.059406093233 5669.180167047688 6208.889923877627 4811.216372587515 5973.083144774489 5700.931031954904 6143.556295539515 6340.160537440227 5762.859689500749 5061.461282094215 1.0219815583408762 1.1449380096207091 1.1200678719213724 1.2266990850730475 0.9505587624680676 1.1801104092024357 1.1263409348053146 1.213791028546123 1.252634404192645 1.1385762664801666 1.0 12.305338246671987 HAQDSDPRS(ph)PTLGIAR ddPTM_A549_PD325901_60min_R1 3 HAQDSDPRSPTLGIAR 16 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 HAQDSDPRS(0.995)PT(0.005)LGIAR;HAQDSDPRS(0.999)PT(0.001)LGIAR;HAQDS(0.034)DPRS(0.756)PT(0.21)LGIAR 159.75 9.350700000000001e-21 160912000.0 6461.6 7272.4 6725.1 7623.0 9615.7 9056.6 8257.1 8904.7 8928.699999999999 9227.8 7956.900000000001 True False 7117.576875221493 7885.27067049002 7181.505727311538 8093.8553969108825 8940.326404364143 8982.846052306159 8571.32845895849 8727.088772897992 8553.45778939064 8645.155133173805 6978.25174294491 1.0199656213918395 1.1299779602336812 1.0291267772866062 1.1598686454804186 1.281169945381078 1.2872631116221789 1.2282916659784018 1.2506124878227811 1.225730756709699 1.2388712032228062 1.0 12.768649928876382 -3.906934233538437 10.117840538483366 1.1410043067296305 0.6286438994499405 0.0 0.10658082060155936 0.0 0.0 0.01635297181135187 0.0 0.0001238984195262492 3.906934233538437 -0.51236040727969 HAS(ph)APSHVQPSDSEK ddPTM_A549_MK2206_60min_R1 3 HASAPSHVQPSDSEK 15 0 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 HAS(0.951)APS(0.049)HVQPSDSEK;HAS(0.854)APS(0.146)HVQPSDSEK;HAS(0.829)APS(0.171)HVQPSDSEK 107.57 1.2668e-06 31520100.0 2600.7799999999997 3115.75 2756.79 3387.5200000000004 3801.0 3050.57 2897.7400000000002 3937.04 6100.200000000001 6177.9 5713.7 True False 3039.7280810338502 3274.328366555745 3147.7442755405577 4217.462552071552 3241.8779351542526 3373.3792925955204 3424.2218490458936 4495.127476679326 4718.514440017678 4782.308099262106 4294.830599902241 0.7077643716851231 0.7623882456808134 0.7329146522361573 0.9819857742858471 0.7548325503753381 0.7854510705666261 0.7972891524810863 1.04663673505112 1.0986497209284762 1.1135033124172489 1.0 12.068385513231725 -8.259166039245741 7.252758681645482 1.0480424648312092 0.7914769687701926 0.7680268323761353 0.07268839075697629 0.05044420843200934 20.110851692732147 0.011950819794728822 0.014981977533565222 5.505971521368246e-09 8.259166039245741 -0.25656549606101664 HAS(ph)APSHVQPSDSEK ddPTM_A549_PD325901_60min_R1 2 HASAPSHVQPSDSEK 15 0 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 HAS(0.966)APS(0.034)HVQPSDSEK;HAS(0.834)APS(0.166)HVQPSDSEK 142.3 5.4554e-14 44848000.0 2900.5 3456.9 4510.299999999999 5047.1 6264.8 6251.799999999999 4836.7 6103.700000000001 5395.2 5669.1 5076.7 True False 3194.9566247647554 3748.2250949916033 4816.396080637195 5358.8479042042445 5824.782060386709 6200.887413577683 5020.763265243793 5981.956915239984 5168.458506313388 5311.152058505344 4452.298083852808 0.7175971969064548 0.8418630164465688 1.0817775427267244 1.20361390977824 1.3082641707013063 1.39273860302986 1.1276790481420467 1.34356613204646 1.1608518587418677 1.1929012744603398 1.0 12.120334469817262 -5.706655871885983 2.6081587919798386 1.1465568314656798 0.7321538519774619 0.6410466281023486 0.11828494591435586 0.18141559739600044 2.359430454049377 0.020463123616902525 0.10826187713664497 1.9649166291598695e-06 5.706655871885983 -0.4144029794882179 HAS(ph)DDDDAESR ddPTM_A549_MK2206_60min_R1 2 HASDDDDAESR 11 0 C9JLZ4;Q53TQ3 C9JLZ4 INO80D INO80 complex subunit D 1 HAS(1)DDDDAESR;HAS(1)DDDDAESR 65.179 0.0058144 3770900.0 654.05 957.51 872.01 679.06 377.65999999999997 0.0 0.0 130.8 125.08 1336.36 915.0799999999999 True False 764.4376500127621 1006.2431691441192 995.6741303160999 845.4297304841614 322.10671428317664 0.0 0.0 149.3413005582001 96.7495797117162 1034.4753478576715 687.8403810768049 1.1113590755111604 1.4629021453623572 1.4475366054510865 1.2291074408290081 0.46828700835929826 0.0 0.0 0.2171162157191299 0.14065702214263145 1.5039468113782652 1.0 9.425930004489608 -6.731097095267864 4.81387500032409 0.45646901940216056 1.346749778887367 0.46604897950462143 0.43148568959170236 0.1259520840700113 6.971342299543653 0.05987010531039598 0.12408295287945631 1.85738915195987e-07 6.731097095267864 0.8902807594852065 HAS(ph)DDDDAESR ddPTM_A549_PD325901_60min_R1 3 HASDDDDAESR 11 0 C9JLZ4;Q53TQ3 C9JLZ4 INO80D INO80 complex subunit D 1 HAS(1)DDDDAESR;HAS(1)DDDDAESR;HAS(1)DDDDAESR 117.79 1.6788e-05 10684800.0 578.6850000000001 898.0340000000001 1163.56 1071.18 1206.484 1209.97 933.36 1016.94 1248.1899999999998 871.137 1302.4699999999998 True False 637.432675194619 973.7144768305969 1242.5261786546832 1137.3443557737119 1121.7447259838466 1200.1164054842743 968.879525554189 996.6563339260036 1195.7329149976479 816.1332611508295 1142.274447037596 0.5580381114606506 0.8524347886410776 1.0877650129328225 0.9956839695778278 0.9820273305535357 1.0506375316340895 0.8482020481740672 0.872519153790718 1.0468000208694963 0.7144808879051883 1.0 10.15769360419902 -5.361464513789184 2.8457735974287233 1.001507506789219 0.5243722017746406 0.47635869231268024 0.1115436220968836 0.11789881562135895 1.4555757595719179 0.010121256055686076 0.11428101505500537 4.35046306820882e-06 5.361464513789184 -0.47713530501457835 HAS(ph)PDKWNDKPK ddPTM_A549_MK2206_60min_R1 4 HASPDKWNDKPK 12 2 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 HAS(1)PDKWNDKPK;HAS(1)PDKWNDKPK;HAS(1)PDKWNDKPK;HAS(1)PDKWNDKPK 97.79700000000001 5.1935e-05 113594200.0 11965.8 11964.2 10608.6 9438.3 21286.5 17817.199999999997 15682.6 16778.899999999998 22251.199999999997 21350.7 15871.4 True False 13985.334504277513 12573.126676770042 12113.059000322677 11750.683923701388 18155.284048056048 19702.604277899824 18531.92542113755 19157.36045822618 17211.338727864877 16527.562041294856 11930.093351644009 1.172273685716825 1.0539001084209807 1.0153364808879266 0.9849616073693256 1.5218056986581907 1.651504619214462 1.5533763965546659 1.6058013875965378 1.442682653065166 1.385367369234986 1.0 13.542317711553835 -6.742994484647238 24.9638650823789 1.32262375437332 1.0534751115860723 0.3982692208640639 0.19632336675277207 328.276130664237 444296.1796939119 0.038472755289564474 0.07996960839316616 1.807197076489259e-07 6.742994484647238 -0.2691486427872476 HAS(ph)PDKWNDKPK ddPTM_A549_PD325901_60min_R1 4 HASPDKWNDKPK 12 2 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 HAS(1)PDKWNDKPK;HAS(1)PDKWNDKPK;HAS(1)PDKWNDKPK;HAS(1)PDKWNDKPK 129.01 1.7005e-08 154697000.0 20119.3 21186.9 22447.100000000002 22392.6 23334.1 28176.100000000002 21614.0 21466.8 30511.6 25641.200000000004 24120.2 True False 22161.796524954145 22972.39441843203 23970.495191377806 23775.74004471555 21695.19331427491 27946.64318335619 22436.53259763463 21038.627833621194 29229.30355894716 24022.210256045422 21153.56831054554 1.0476623234249316 1.0859819998775226 1.1331655652360062 1.1239588373779377 1.0256044273844502 1.3211313936771674 1.060650017446442 0.9945663788143467 1.3817670442095427 1.1356103094942047 1.0 14.368613425859573 HAS(ph)PEDIKK ddPTM_A549_MK2206_60min_R1 2 HASPEDIKK 9 1 E9PH18;A0A0J9YX62;O75190-3;O75190;C9JN01;C9JB42;C9JDR7;C9JDX6;F8WCZ4;C9J2P2;C9J2C4;O75190-2 E9PH18 DNAJB6 DnaJ homolog subfamily B member 6 1 HAS(1)PEDIKK;HAS(1)PEDIKK 56.225 0.0067018 9273700.0 3539.3 4214.9 4734.5 3691.1 5835.7 4761.7 4441.200000000001 4345.4 6663.8 6227.3 5568.5 True False 4136.647312422853 4429.42040670651 5405.923292142949 4595.4196656997765 4977.276260505046 5265.579933439351 5248.108552176047 4961.373757229376 5154.459939901936 4820.548604952317 4185.6877672183755 0.9882837761622835 1.058230009748221 1.2915256924993928 1.0978887870448328 1.189117903032869 1.2579963500093139 1.2538222734333837 1.18531864609827 1.23144874308849 1.1516741986122492 1.0 12.031248981949398 -4.140072351386968 16.106967961375442 1.1392136375219892 1.146945532209356 0.0 0.1018682184682414 0.0 0.0 0.01565653602502541 0.0 7.243152825555858e-05 4.140072351386968 0.0077318946873667915 HAS(ph)PEDIKK ddPTM_A549_PD325901_60min_R1 2 HASPEDIKK 9 1 E9PH18;A0A0J9YX62;O75190-3;O75190;C9JN01;C9JB42;C9JDR7;C9JDX6;F8WCZ4;C9J2P2;C9J2C4;O75190-2 E9PH18 DNAJB6 DnaJ homolog subfamily B member 6 1 HAS(1)PEDIKK;HAS(1)PEDIKK 57.019 0.0060065 14845900.0 5256.9 5090.9 6299.2 6356.6 6705.3 6741.4 7153.6 7252.1 6795.6 6689.9 6485.6 True False 5790.576618074761 5519.928009515106 6726.7015921667835 6749.232745113959 6234.342860029212 6686.500273504049 7425.834162600123 7107.4511763376095 6510.004564335572 6267.498572294521 5687.912315605763 1.0180495578645474 0.9704664388672514 1.1826310285605008 1.1865922627879268 1.096068735610467 1.1755631772238275 1.3055465257834713 1.2495711575646302 1.1445332141415503 1.1018978888086168 1.0 12.47368350932128 -4.244376681936508 16.24403092071294 1.107669174024601 1.1107661651952276 0.0 0.10256931184068205 0.0 0.0 0.015502033893120075 0.0 5.696699591400511e-05 4.244376681936508 0.003096991170626673 HAS(ph)PILPITEFSDIPR ddPTM_A549_MK2206_60min_R1 5 HASPILPITEFSDIPR 16 0 P42167;G5E972;H0YJH7 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR 190.11 1.9546e-34 455748100.0 24995.260000000002 29868.13 29490.07 25615.8 42791.44 36022.35 33035.38 33832.214 49461.06999999999 41682.350000000006 38980.36 True False 29213.84881256477 31388.290239901973 33672.20536485922 31891.672149936945 36496.875861477805 39834.21116729929 39037.480929115016 38628.03394130998 38258.21661809859 32266.278185350686 29300.46080879382 0.9970440056627691 1.0712558565113603 1.1492039522720858 1.0884358562840566 1.2456075725104008 1.3595080100359385 1.332316279387622 1.3183421992365634 1.305720646093604 1.1012208441331661 1.0 14.838635733662294 -5.6808972035350545 1.1921019637959644 1.1939690173607187 0.978313513839984 0.29475037614894883 0.1097577041346073 1.2431791584444678 2.3085325551966465 0.022089990099502587 0.2741964146109974 2.0849843354999887e-06 5.6808972035350545 -0.2156555035207347 HAS(ph)PILPITEFSDIPR ddPTM_A549_PD325901_60min_R1 3 HASPILPITEFSDIPR 16 0 P42167;G5E972;H0YJH7 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR 165.58 5.3628e-21 171229000.0 11943.400000000001 12458.210000000001 15082.4 15120.0 17880.9 18163.5 16902.1 18364.2 16557.9 16015.1 15273.6 True False 13155.885175733616 13508.10707879179 16105.982361839007 16053.928059988539 16625.007269756206 18015.582478089244 17545.318664683997 17997.911624563792 15862.029044648292 15003.903852845939 13395.044027327642 0.9821457211259544 1.0084406629223082 1.2023836822768703 1.1984975956209196 1.2411312150851477 1.3449438793433675 1.3098365805210683 1.3436246710235291 1.1841714750834471 1.1201085880894466 1.0 13.709411702641116 -3.9293860003751124 16.013281811564656 1.1449552479702845 1.1474091366776609 0.0 0.13155570466200528 0.0 0.0 0.020408641827438352 0.0 0.0001176559783845984 3.9293860003751124 0.002453888707376395 HAS(ph)TSSPADK ddPTM_A549_MK2206_60min_R1 2 HASTSSPADK 10 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HAS(0.733)T(0.257)S(0.005)S(0.005)PADK;HAS(0.966)T(0.033)S(0.001)SPADK 83.045 0.001004 5251000.0 2065.84 1768.3 1767.33 1823.17 2896.8 1796.52 1776.76 2498.2 3738.5 2412.14 2911.4 True False 2414.5032870611785 1858.2989169800271 2017.9639691420434 2269.8467318452117 2470.684557367755 1986.626553966538 2099.5742932460394 2852.327500416632 2891.735719157746 1867.2358986960126 2188.41902944771 1.103309400334782 0.8491513243005409 0.9221104102952878 1.037208460217992 1.1289814812071346 0.907790750872744 0.9594023196626598 1.3033735596498046 1.3213811798591113 0.8532350859548347 1.0 11.095673290537476 -8.23628245110281 24.406603641796433 1.1673745532532052 0.9834270933212368 0.13113873838606538 0.14630282528739447 586.0744387267232 568594.9204860291 0.023194147445835245 0.029935877212720608 5.8038682990223184e-09 8.23628245110281 -0.18394745993196837 HASTS(ph)SPADKAK ddPTM_A549_PD325901_60min_R1 1 HASTSSPADKAK 12 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HAS(0.033)T(0.112)S(0.465)S(0.39)PADKAK 41.996 0.024615 6087500.0 833.13 1173.9 1388.8 1099.1 1429.0 1806.2 1494.0 1273.9 1251.6 916.72 1289.6 True False 917.70874428211 1272.8286728024088 1483.0523195328342 1166.9889107627907 1328.6319697823726 1791.4909060437017 1550.8549875481697 1248.4910651447829 1198.9996045562432 858.8381427515861 1130.9873754479452 0.811422624340645 1.1254136875739087 1.3112898974185705 1.0318319515287133 1.1747540234533098 1.5840061038118607 1.3712398751877575 1.103894784546378 1.0601352681601426 0.7593702294081134 1.0 10.14336711011688 -8.522715142878589 5.070613391874495 1.0301429446596766 1.211919810649305 0.20798701409318843 0.20246350505041724 0.2548979597762816 19.39539867339763 0.03207467617204513 0.037430611943027596 3.001130338244952e-09 8.522715142878589 0.1817768659896284 HASTSS(ph)PADKAK ddPTM_A549_PD325901_60min_R1 2 HASTSSPADKAK 12 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HAS(0.028)T(0.156)S(0.205)S(0.611)PADKAK;HAS(0.017)T(0.114)S(0.187)S(0.682)PADKAK 71.87899999999999 0.00094719 12351000.0 1996.3400000000001 2489.0 2317.44 2693.7 3522.0 3236.2 2796.3 3319.7999999999997 2364.0 2676.3999999999996 2823.1 True False 2199.006967172167 2698.756765146259 2474.7154142987984 2860.0837311634314 3274.626870240389 3209.845460158692 2902.7147266940733 3253.5839846672798 2264.6493010314443 2507.4116472427168 2475.8765971053763 0.8881730897828648 1.0900207095545307 0.9995310013399151 1.1551802438406031 1.322613119760838 1.296448079807944 1.1723987900235928 1.3141139540117408 0.9146858545692931 1.0127369232271952 1.0 11.273723694052393 -8.78328393602673 24.999967520380007 0.9597127436026404 1.1583876570291083 0.27733358602288405 0.12787617790803407 206.74302025307074 236605.64287553038 0.023308480691061634 0.024823995345813372 1.6470851967728972e-09 8.78328393602673 0.19867491342646793 HAVSEGTK ddPTM_A549_MK2206_60min_R1 3 HAVSEGTK 8 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q96A08;Q16778;P33778;P23527;P06899;Q8N257;A0A2R8Y619 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ;; 94.11399999999999 0.0027335000000000003 81727000.0 2064.25 1291.8400000000001 1427.05 1187.78 2858.3 2404.2 2022.4 2269.46 3888.4 2395.73 2367.2 False True 2412.644933932945 1357.5891381052318 1629.4271483900309 1478.78615332147 2437.8478563671138 2658.6108482212 2389.8439016303782 2591.16290492976 3007.6836084988577 1854.532929093253 1779.3589086036343 1.3559068506455996 0.7629653194422762 0.9157383260405493 0.8310780619756802 1.3700708972088345 1.4941397350282555 1.343092666732327 1.4562339797782535 1.690318683856289 1.0422478119091847 1.0 10.797141825867305 -6.770862438807157 24.51031621383464 1.3598041633797067 0.9482692383512563 0.3794138539961135 0.23013206766575792 137.54102317409735 357758.9248517026 0.04027879176018504 0.07686732388888508 1.69487456076865e-07 6.770862438807157 -0.41153492502845035 HAVSEGTK ddPTM_A549_PD325901_60min_R1 2 HAVSEGTK 8 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q96A08;Q16778;P33778;P23527;P06899;Q8N257;A0A2R8Y619 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ; 107.9 0.0019268 82101000.0 2287.23 2379.48 2244.51 2299.03 2912.9500000000003 2403.61 2257.0 2465.24 2334.3900000000003 2433.69 2711.55 False True 2519.4279058302673 2580.007130385787 2396.835945935082 2441.0358616240374 2708.3544411319544 2384.0357970743557 2342.8913700777894 2416.0688542566313 2236.2837063598977 2280.026398063867 2378.0465399316645 1.059452732957306 1.0849270975411298 1.0079011935586244 1.0264878422834327 1.1388988380394698 1.0025185617867947 0.9852167864406534 1.0159888857036665 0.9403868548443798 0.958781234840503 1.0 11.215561234510835 -7.506164729053871 21.23707916231633 0.9768326757823815 1.0606868650679175 0.5498516250121435 0.03625227808406421 62.37907466155065 79259.35755349872 0.005790438105790524 0.009095035473645015 3.117706805296267e-08 7.506164729053871 0.08385418928553601 HAVSEGTKAVTKYTSSK ddPTM_A549_PD325901_60min_R1 2 HAVSEGTKAVTKYTSSK 17 2 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;Q5QNW6-2;Q99880;Q96A08;Q16778;P33778;P23527;Q8N257;A0A2R8Y619 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BL;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-L;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 3-B 0 ; 95.205 9.129000000000001e-07 7323900.0 4038.3 4500.4 1538.73 1827.77 5329.2 3837.9 1732.97 2094.0699999999997 3995.6 5973.0 2083.37 False True 4448.265243160667 4879.664502155176 1643.157470935166 1940.6672017331498 4954.895376741934 3806.645414851688 1798.919121667571 2052.3021310838644 3827.6788270732836 5595.86376064144 1827.128697570553 2.4345659115722476 2.6706736688244437 0.8993112926965654 1.0621403978349 2.7118480396757083 2.0834030027075845 0.9845607066757307 1.1232389561899574 2.0949147326965902 3.0626544085712175 1.0 10.835362541401208 -10.971420327746282 1.0798464457781662 0.9718756821492217 1.7890194158781962 0.0 0.8927398373633935 0.8647391650191129 1.6861529817663905 0.5655011458017276 0.11303967155193433 1.0680207052561795e-11 10.971420327746282 0.8171437337289745 HAYKDDS(ph)PR ddPTM_A549_MK2206_60min_R1 2 HAYKDDSPR 9 1 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 HAY(0.009)KDDS(0.991)PR;HAYKDDS(1)PR 75.695 0.0005722 117369000.0 3372.1 3913.1000000000004 3179.9 3074.1 4065.9 3687.1000000000004 3766.7 4756.4 4599.3 4936.1 4872.8 True False 3941.228040070381 4112.260075798533 3630.857635797947 3827.2546380015942 3467.8114960651596 4077.2664747011004 4451.060633045463 5430.634265864086 3557.5658935728834 3821.031581729662 3662.7492775615838 1.0760299822362371 1.1227249708274336 0.9912929771199441 1.0449130824890989 0.9467782895513392 1.1131710542348328 1.2152239467531025 1.4826661216296637 0.9712829418510665 1.0432140701351669 1.0 11.838711233757058 HAYKDDS(ph)PR ddPTM_A549_PD325901_60min_R1 2 HAYKDDSPR 9 1 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 HAY(0.001)KDDS(0.999)PR;HAYKDDS(1)PR 88.803 0.00046725 121464000.0 5375.8 5047.0 7710.7 5223.2 7672.5 5355.2 5220.5 5254.4 6927.7 5803.3 4550.4 True False 5921.547258545206 5472.328402448038 8233.994470205806 5545.825201252121 7133.610068688071 5311.5890267109 5419.168984267216 5149.596870002939 6636.5528607256965 5436.878647602626 3990.729647362226 1.4838257115360354 1.371260116822274 2.063280451896378 1.389676999271994 1.787545311019305 1.330981924626673 1.3579393903190493 1.2903898096446338 1.6629923465530407 1.3623770909152588 1.0 11.962436831208327 -10.93718025849151 0.8093762359917378 0.9395114821554912 1.537128233352098 0.17048930960690367 0.24602252620640314 0.6227205865390301 0.5959040864898184 0.25468512067399746 0.039974293800437814 1.1556324852199263e-11 10.93718025849151 0.5976167511966067 HAYKDDS(ph)PRR ddPTM_A549_PD325901_60min_R1 1 HAYKDDSPRR 10 2 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 HAY(0.001)KDDS(0.999)PRR 44.61600000000001 0.011254 4650600.0 891.33 960.15 1028.5 882.32 1035.2 723.98 800.72 820.11 923.56 1154.5 725.74 True False 981.8171654375345 1041.0652101467185 1098.300194872926 936.818902505892 962.4911232461253 718.0841469148041 831.1918377707962 803.7522626861512 884.7459849664141 1081.6046729717978 636.4785808449063 1.5425769145824224 1.63566417076398 1.725588618261066 1.4718781286595581 1.5122129042715735 1.1282141591655275 1.3059227172537586 1.262811172088767 1.390064036077915 1.6993575361734872 1.0 9.313968154288188 -2.6360120925690924 0.04306585025670234 1.374796096768788e-11 3.7080169003886603 0.0 0.22779982195696513 193.88275177671278 0.6862448564698383 16.24886900724029 52.51617652821204 0.0023120004135483404 2.6360120925690924 3.708016900374912 HAYKDDS(ph)PRRR ddPTM_A549_PD325901_60min_R1 1 HAYKDDSPRRR 11 3 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 HAYKDDS(1)PRRR 81.494 0.00013637 3406100.0 194.06 379.89 481.54 402.78 571.29 472.25 235.95 622.01 580.82 391.06 351.22 True False 213.7608283405786 411.90466352407094 514.2202001352539 427.6588058202498 531.1645612435068 468.40415257398826 244.92920636679423 609.6035225925946 556.410155255958 366.3684048612828 308.0221665670185 0.6939787182299076 1.3372565621326804 1.6694259567951306 1.38840269382756 1.7244361571878553 1.520683260540843 0.7951674682916151 1.9790897823581115 1.8063964728814284 1.189422206020259 1.0 8.266890366816948 -5.277094146389702 4.084905960242728 1.437593604646854 0.6408414349662515 0.29361094481792005 0.33596504124944615 0.2351473390289347 8.346925170761185 0.05176813134067083 0.5347514262432429 5.283307077905419e-06 5.277094146389702 -0.7967521696806026 HCAPS(ph)PDRS(ph)PELSSSR ddPTM_A549_MK2206_60min_R1 1 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 2 HCAPS(0.999)PDRS(0.952)PELS(0.015)S(0.016)S(0.018)R 71.535 0.00031986 37677000.0 575.52 594.41 764.39 749.19 803.25 836.7 744.89 845.13 1479.9 809.91 1016.9 True False 672.6537058869276 624.662930069614 872.7919960462879 932.7415836324169 685.0929890588411 925.2390386434904 880.2268709876645 964.9297656020767 1144.7050129146846 626.9507684930758 764.3756649877638 0.8800040826753629 0.8172198026210237 1.1418364503535832 1.220265932520691 0.8962778649812303 1.2104506736989091 1.1515631793455319 1.2623763547175764 1.497568624104496 0.8202128838090522 1.0 9.578138038523997 -5.604419677667907 0.5982564050870698 1.2307909654201399 0.6649789639759011 0.12283472442619259 0.19357977371090135 2.3865677057067716 0.7309064461626508 0.03597628773106999 0.8532753940621537 2.4864533887838906e-06 5.604419677667907 -0.5658120014442388 HCAPS(ph)PDRS(ph)PELSSSR ddPTM_A549_PD325901_60min_R1 2 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 2 HCAPS(1)PDRS(0.692)PELS(0.094)S(0.107)S(0.107)R;HCAPS(1)PDRS(1)PELSSSR 84.499 0.00032710000000000004 55774300.0 1459.3600000000001 1491.1599999999999 1178.12 1365.83 1219.89 1139.72 1045.79 1517.0700000000002 949.5 1654.81 1300.56 True False 1607.5131528759507 1616.8252864264755 1258.0743078110759 1450.1942170750087 1134.209134792035 1130.4384981929616 1085.5881107282457 1486.8108487316078 909.5958169751938 1550.3250141883595 1140.5993649291088 1.409358274520749 1.4175225202996369 1.102994045494027 1.271431724113876 0.9943974805408813 0.991091642649846 0.9517698712691444 1.303534698026083 0.7974717897828459 1.3592196014283386 1.0 10.155576419208735 -5.546240559350232 0.4402134570741192 0.9221070123064818 1.7362549165092862 0.1568297966734844 0.18745592988286752 1.992812340012763 0.29995661261981416 0.03202214246271578 0.804278954102959 2.8428859729018625e-06 5.546240559350232 0.8141479042028044 HCAPS(ph)PDRSPELSSSR ddPTM_A549_MK2206_60min_R1 2 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 HCAPS(0.986)PDRS(0.009)PELS(0.001)S(0.002)S(0.002)R;HCAPS(0.988)PDRS(0.01)PELS(0.001)S(0.001)S(0.001)R 52.611999999999995 0.0072465 6513800.0 1010.73 909.14 881.88 783.13 1333.87 861.84 526.04 927.87 1105.1599999999999 1347.2800000000002 1350.1 True False 1181.3165140240021 955.4113427490945 1006.943844730177 974.9968851560418 1137.6594899669042 953.0393367569088 621.6146588279487 1059.3984139826991 854.8430245778719 1042.928512273403 1014.8329091355886 1.1640502622547197 0.9414469457468541 0.9922262430254344 0.9607462237172835 1.1210313340507814 0.9391096092544791 0.6125290707781893 1.0439141305390565 0.8423485451472081 1.0276849547200293 1.0 9.987026493840448 -7.505666985637912 24.81124783644115 0.9071121025148794 1.0246531804568237 0.1981087309863413 0.12563780113020112 931.57610441527 1342894.604054742 0.01831187631306987 0.028866657208612607 3.1212820467658555e-08 7.505666985637912 0.11754107794194435 HDAELRVPS(ph)PTEEPYAPEL ddPTM_A549_MK2206_60min_R1 2 HDAELRVPSPTEEPYAPEL 19 1 Q6N075;Q6N075-2 Q6N075 MFSD5 Molybdate-anion transporter 1 HDAELRVPS(0.817)PT(0.183)EEPYAPEL;HDAELRVPS(0.799)PT(0.198)EEPY(0.003)APEL 104.18 5.1041e-10 35394000.0 1308.13 1255.72 1155.55 1104.08 1653.82 1674.3 1459.1 1768.0300000000002 2092.17 1552.31 1789.12 True False 1528.9103632920944 1319.6307843862248 1319.4243658751263 1374.5796495640345 1410.5452688021057 1851.4733146896083 1724.199583103681 2018.65366686479 1618.296835508964 1201.6420928738833 1344.8321267999888 1.1368782265263973 0.9812606035269767 0.9811071133574717 1.0221198781403515 1.0488634534322738 1.3767319190203804 1.2820927971183975 1.5010450945042122 1.2033448660686603 0.8935257188814901 1.0 10.393210379415283 -7.027938804621431 24.753850743053153 1.1669710074790378 1.0248404723300875 0.20206916359715055 0.16214598767852714 1003.9341522069147 889487.1108286332 0.025499299111636634 0.0442331844521011 9.376941258147329e-08 7.027938804621431 -0.14213053514895035 HDAELRVPS(ph)PTEEPYAPEL ddPTM_A549_PD325901_60min_R1 2 HDAELRVPSPTEEPYAPEL 19 1 Q6N075;Q6N075-2 Q6N075 MFSD5 Molybdate-anion transporter 1 HDAELRVPS(0.975)PT(0.025)EEPYAPEL;HDAELRVPS(0.965)PT(0.035)EEPYAPEL 110.67 1.6173e-10 43426000.0 2458.3 3041.3 3586.7 2937.1 3747.7 3983.8 3053.7 2806.3 3124.5 3034.4 3001.4 True False 2707.8648062951884 3297.6010244432787 3830.115030579216 3118.517996361925 3484.4744808631194 3951.357253624679 3169.9102245487566 2750.3261450002396 2993.188130741434 2842.8074661460555 2632.246827442199 1.0287275410742802 1.2527704431303717 1.4550744218394622 1.1847361591816388 1.3237643387147873 1.501134776735312 1.204260250786973 1.0448587557697924 1.1371228942271985 1.0799927409955175 1.0 11.362079062500662 -8.086492309871545 4.565391254879725 1.0658584958956328 1.2975068020420943 0.4225272185421549 0.12249915020124424 0.16272252601801487 5.976195665933959 0.020084944153115004 0.02632013514838925 8.194221327030365e-09 8.086492309871545 0.2316483061464616 HDDGTQS(ph)DSENAGAHR ddPTM_A549_MK2206_60min_R1 4 HDDGTQSDSENAGAHR 16 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 HDDGT(0.023)QS(0.935)DS(0.042)ENAGAHR;HDDGT(0.052)QS(0.935)DS(0.013)ENAGAHR;HDDGT(0.005)QS(0.992)DS(0.003)ENAGAHR;HDDGT(0.004)QS(0.996)DSENAGAHR 128.59 6.5471e-10 124368000.0 468.89 734.84 559.39 609.608 441.43 524.76 380.62 517.1800000000001 837.1800000000001 1609.74 1095.11 True False 548.0271687401327 772.240217244587 638.7199134843902 758.9619873663428 376.496231758785 580.2897548925041 449.7737271749185 590.4918487973237 647.5600667017474 1246.0986159870154 823.1639635015738 0.6657569974381962 0.9381365699728066 0.7759327932279788 0.9220058469735134 0.4573769606692278 0.704950387312958 0.5463962796204922 0.7173441440335777 0.7866720306209193 1.5137915059915434 1.0 9.685036015039215 -9.988297277872013 0.8229907191747297 0.9814180329548711 0.7219608545772125 0.38656681477293087 0.21056742197439038 0.4579159959512378 0.6287640033996129 0.0593705902568471 0.027862612170296123 1.0273128539449142e-10 9.988297277872013 -0.2594571783776586 HDDGTQS(ph)DSENAGAHR ddPTM_A549_PD325901_60min_R1 6 HDDGTQSDSENAGAHR 16 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 HDDGTQS(0.999)DS(0.001)ENAGAHR;HDDGT(0.117)QS(0.754)DS(0.129)ENAGAHR;HDDGTQS(0.997)DS(0.003)ENAGAHR;HDDGT(0.035)QS(0.483)DS(0.483)ENAGAHR;HDDGT(0.031)QS(0.793)DS(0.175)ENAGAHR;HDDGT(0.103)QS(0.752)DS(0.145)ENAGAHR 131.11 1.3199e-10 209759400.0 625.8399999999999 905.57 1044.3400000000001 530.01 1238.08 693.56 861.3 822.3100000000001 691.692 1181.98 1157.3799999999999 True False 689.3748160809427 981.885561998192 1115.215192526584 562.7475139599549 1151.1215319441283 687.911877309085 894.0772428214445 805.9083819602841 662.6225906637233 1107.3495810820314 1015.0295972363077 0.6791672065109745 0.967346730254606 1.0987021418518814 0.5544148815878739 1.1340768141917907 0.6777259295513263 0.8808385935304855 0.7939752536818507 0.6528111027184746 1.090952996934365 1.0 9.987306080213916 HDDGTQS(ph)DSENAGAHRR ddPTM_A549_MK2206_60min_R1 2 HDDGTQSDSENAGAHRR 17 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 HDDGT(0.007)QS(0.847)DS(0.146)ENAGAHRR;HDDGT(0.005)QS(0.965)DS(0.03)ENAGAHRR 58.997 0.0011541 22865000.0 2129.73 1455.4299999999998 1124.49 945.9100000000001 547.95 355.272 346.86 413.62 492.84000000000003 2685.4700000000003 2163.99 True False 2489.1763571006486 1529.5051703558454 1283.9595908294075 1177.6579924635141 467.3472808649757 392.8666472295327 409.8799721714363 472.2519016581248 381.21252690375917 2078.8204618600835 1626.6115599143195 1.5302832086301932 0.940301426627271 0.7893461613521541 0.7239946041730739 0.2873133896144159 0.24152456364580777 0.2519839292135772 0.29032862749543 0.23435990269480148 1.2780066938474135 1.0 10.66765405657437 -5.1898084290330155 1.0717972154941875 0.5303810349360862 2.1193371821182025 0.4461130182480004 0.3285726696183199 1.4478713669056222 1.1815257527219372 0.05091341542941268 2.7000366767390984 6.459390953965485e-06 5.1898084290330155 1.5889561471821163 HDDGTQS(ph)DSENAGAHRR ddPTM_A549_PD325901_60min_R1 1 HDDGTQSDSENAGAHRR 17 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 HDDGT(0.115)QS(0.757)DS(0.128)ENAGAHRR 44.806999999999995 0.009832899999999999 4691000.0 157.61 0.0 0.0 0.0 0.0 0.0 107.95 0.0 0.0 0.0 0.0 True False 173.6104511736504 0.0 0.0 0.0 0.0 0.0 112.0580963225066 0.0 0.0 0.0 0.0 0.0 HDKS(ph)STEEEMEIEK ddPTM_A549_MK2206_60min_R1 2 HDKSSTEEEMEIEK 14 1 Q14789;Q14789-2;E7EU81;Q14789-4;Q14789-3;H0Y867 Q14789 GOLGB1 Golgin subfamily B member 1 1 HDKS(0.753)S(0.123)T(0.123)EEEMEIEK;HDKS(0.835)S(0.148)T(0.017)EEEMEIEK 143.71 1.4611e-13 12455600.0 10725.0 12086.7 12715.699999999999 9713.0 17360.4 11549.2 11781.599999999999 10878.5 17733.0 18608.5 19094.0 True False 12535.117798924963 12701.861403530227 14518.977464547923 12092.685436033144 14806.708157182828 12771.328678261496 13922.164216499443 12420.560689009024 13716.503813782083 14404.82692583546 14352.43283240866 0.8733793040730983 0.8849970978333831 1.0116039304335356 0.8425530066740413 1.0316514510173067 0.889837202332908 0.9700212067923673 0.8653975833952449 0.9556919007354202 1.0036505374411848 1.0 13.809007683542003 -14.999999999702672 0.10553722379084435 1.2548496541184835 0.8798364505558108 0.20932379240426424 0.05834320486486705 107.82618810723244 0.811636646890063 5.878386166156116 0.3109780157372968 1.0000000006846239e-15 14.999999999702672 -0.37501320356267265 HDLS(ph)TEGDSR ddPTM_A549_MK2206_60min_R1 1 HDLSTEGDSR 10 0 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 HDLS(0.439)T(0.439)EGDS(0.122)R 47.559 0.032922 1865100.0 217.54 329.5 182.97 185.27 354.9 343.07 265.83 356.75 599.39 493.02 674.29 True False 254.2554336576351 346.2701425917091 208.91789729927044 230.6611583170863 302.69468013318703 379.37343968856493 314.1278700407455 407.3204050010539 463.6291220291456 381.6464395827394 506.8451835427274 0.5016431879266368 0.6831872016053563 0.41219272488491254 0.4550919409055436 0.5972132910831334 0.7484996444808546 0.6197708496410409 0.8036387011788907 0.9147351836087071 0.7529842483953807 1.0 8.985401331395074 -8.222978118860452 0.6887380818581714 0.9834202259770984 0.5185382495948997 0.6420425543403667 0.10632558342557187 0.1694537994104304 0.16472500474215954 0.01954710118553821 0.0275165442879874 5.984417457024e-09 8.222978118860452 -0.46488197638219875 HDLS(ph)TEGDSR ddPTM_A549_PD325901_60min_R1 2 HDLSTEGDSR 10 0 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 HDLS(0.5)T(0.5)EGDSR;HDLS(0.499)T(0.499)EGDS(0.002)R 74.944 0.0015792 4492600.0 1272.73 1181.26 1304.0900000000001 1251.53 1898.63 1729.82 1458.47 1468.42 1300.04 1587.96 1735.25 True False 1401.9366126656946 1280.8089258323303 1392.593389530224 1328.8341656691434 1765.27677871792 1715.7329194399929 1513.972873955408 1439.1312111467957 1245.4038398108805 1487.6959345970506 1521.8252506560525 0.9212204962832136 0.8416268065470585 0.9150810113906854 0.8731844639167924 1.1599733793068006 1.1274178284926917 0.9948401587519596 0.9456612778151712 0.8183619237977502 0.9775734329258311 1.0 10.57158699009612 HDS(ph)DT(ph)SPPR ddPTM_A549_MK2206_60min_R1 1 HDSDTSPPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(0.997)DT(0.715)S(0.288)PPR 70.028 0.005710100000000001 4123100.0 242.51 274.85 298.62 182.53 451.93 465.5 337.72 506.21 577.02 419.35 518.15 True False 283.43975919974764 288.8386910207324 340.96880631528734 227.2498581940831 385.451695668051 514.7589010261083 399.0793524815128 577.9668177031076 446.3258913115964 324.6185437487764 389.4790547875011 0.7277406980316097 0.7416026291280853 0.8754483768101962 0.5834713199611468 0.9896596259286717 1.3216600345991893 1.0246490731041995 1.4839483936265712 1.1459560811430818 0.8334685517964182 1.0 8.605401935605443 -6.952757698886442 6.471011370435388 1.118776694634234 0.7455245020409013 0.5449425511744724 0.17145225751917395 0.11274138254537507 11.196468153074118 0.022500298509030788 0.04264794801810906 1.1149163930654059e-07 6.952757698886442 -0.37325219259333264 HDS(ph)DTS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 HDSDTSPPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(0.997)DT(0.259)S(0.744)PPR 63.32 0.0078092 3336700.0 0.0 130.34 107.23 208.29 261.4 128.68 192.51 0.0 250.02 175.39 196.0 True False 0.0 136.97374927284784 122.43682640542583 259.3210593504932 222.94840627448616 142.2968321891291 227.48657511019783 0.0 193.39086919989833 135.76927718635477 147.327790675191 0.0 0.9297210570056643 0.8310504477417875 1.760163905004252 1.513281406398156 0.965851938300266 1.544084616131456 0.0 1.3126570914666138 0.9215455995378432 1.0 7.202885783675954 -5.352943513518033 2.501825627531807 1.1366202313612552 2.4446568180693146e-17 0.321023023119683 0.4493656260888012 0.36863376542909415 3.262278001626637 0.05853077047713738 0.8082227185604465 4.436663456116451e-06 5.352943513518033 -1.1366202313612552 HDS(ph)DTS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 HDSDTSPPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(0.993)DT(0.232)S(0.775)PPR;HDS(0.987)DT(0.31)S(0.703)PPR 83.883 0.0016097000000000001 10211300.0 1126.07 1319.98 1142.5 1023.1800000000001 1676.59 1606.77 1560.54 650.03 1560.45 1432.99 1348.9699999999998 True False 1240.3877974310797 1431.2193470702127 1220.0369204106155 1086.3795047896213 1558.8321023215026 1593.6849978428963 1619.927203660254 637.0646417113298 1494.8697131110484 1342.5107668443966 1183.0552418253828 1.0484614357629118 1.2097654416051846 1.0312594689392292 0.9182829899924227 1.3176325561233462 1.3470926305891993 1.369274355406096 0.5384910350664417 1.2635671270975941 1.1347828227978463 1.0 10.20830172541232 -3.878365196257345 10.304084716253428 1.1149585697759772 0.7961948241113156 0.0 0.23095539048803757 0.0 0.0 0.029336119112790403 0.0 0.00013232283705057996 3.878365196257345 -0.3187637456646616 HDS(ph)DTS(ph)PPRR ddPTM_A549_PD325901_60min_R1 2 HDSDTSPPRR 10 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(0.903)DT(0.285)S(0.812)PPRR;HDS(0.822)DT(0.3)S(0.878)PPRR 55.261 0.0043504 57708000.0 1772.83 1653.6 2245.69 2048.5 2978.3999999999996 2427.52 2229.38 1394.24 2393.1000000000004 2369.61 1772.5100000000002 True False 1952.8063965115316 1792.9546753097054 2398.096027830999 2175.0311925189476 2769.2074589221975 2407.7510819616914 2314.220275863547 1366.4307894398785 2292.5263292294226 2219.9924201998288 1554.5025068666534 1.2562259551756676 1.1533945216490453 1.5426774915048174 1.399181527795068 1.781410738605996 1.548888516632177 1.4887208387513156 0.8790148509918692 1.474765282849478 1.428104754024859 1.0 10.602237227903414 -11.430491567240143 0.4601715658343543 0.7675688468024614 1.4183134650613978 0.0 0.2579652920404083 3.132267394457213 0.5664020842122016 1.0338983433052835 0.056792742745880434 3.711149354162733e-12 11.430491567240143 0.6507446182589364 HDS(ph)IPAADTFEDLSDVEGGGSEPTQR ddPTM_A549_PD325901_60min_R1 1 HDSIPAADTFEDLSDVEGGGSEPTQR 26 0 O95671;O95671-2;O95671-3 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 HDS(0.929)IPAADT(0.056)FEDLS(0.015)DVEGGGSEPTQR 41.431999999999995 0.024138999999999997 769900.0 259.38 307.71 151.96 258.5 407.36 210.6 205.29 311.53 210.41 263.52 317.63 True False 285.71206665453616 333.64180160833877 162.27291940971304 274.46695790390436 378.74843891570856 208.88494342420742 213.1024232889984 305.31628975944295 201.56719942048503 246.88130222739537 278.5635236224648 1.0256621647339574 1.1977225060540273 0.5825347026757186 0.985293962162424 1.359648363110971 0.7498646653655477 0.7650047663017597 1.09603829600187 0.7235950952920442 0.886265721430175 1.0 8.121862547016613 HDS(ph)LKK ddPTM_A549_MK2206_60min_R1 1 HDSLKK 6 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 HDS(1)LKK 53.472 0.036129 7106000.0 2819.9 3306.5 2916.2 2138.2 4121.4 3942.9 4034.4 4047.7 3616.9 3882.0 3681.6 True False 3295.830180064194 3474.786726796621 3329.761010570762 2662.059095987444 3515.147519585565 4360.135060914803 4767.39825788054 4621.473870561365 2797.677925002447 3005.0535038339085 2767.3571130090986 1.1909667041419376 1.255633655107958 1.2032277998809235 0.9619499714992843 1.2702182537487376 1.5755592367960742 1.7227260751673235 1.6699954801049093 1.0109565953200665 1.0858929227844938 1.0 11.434293112897473 -8.871167313071663 13.72248499776583 1.0048495284303491 1.3513156761103486 0.3070794422609683 0.21560955608593022 0.5374694076098595 64.198120790155 0.04147124008871452 0.04414005506247808 1.345341957739111e-09 8.871167313071663 0.3464661476799995 HDS(ph)PDLAPNVTYSLPR ddPTM_A549_MK2206_60min_R1 4 HDSPDLAPNVTYSLPR 16 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR 112.56 9.0359e-08 79913700.0 2435.34 2890.1000000000004 2895.9900000000002 2576.25 4379.02 3210.75 2596.88 2841.1000000000004 4556.65 4040.34 3925.0 True False 2846.365853653514 3037.1937453848227 3306.68492867527 3207.4313656522586 3734.8719588527183 3550.5094338766394 3068.6994814408113 3243.8346255038405 3524.5760504748264 3127.6243878620035 2950.31417551084 0.9647670330434123 1.0294475654813744 1.120790780901402 1.0871490881464851 1.2659234700677375 1.2034343539910888 1.0401263387176294 1.0994878621501991 1.1946443127076642 1.0600987562012654 1.0 11.526652878227097 -5.545658692074522 2.6850576439722005 1.1109848529699622 0.966088577733746 0.29693825288828724 0.07419169279564493 0.37090199407723107 4.817891312476446 0.012617557690574916 0.08932989734104936 2.8466974211612294e-06 5.545658692074522 -0.14489627523621618 HDS(ph)PDLAPNVTYSLPR ddPTM_A549_PD325901_60min_R1 2 HDSPDLAPNVTYSLPR 16 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR 121.26 2.7088e-08 132117000.0 1833.85 2166.97 1921.6 2158.17 3190.0 2606.2 2545.7799999999997 1863.08 2132.34 2443.8 2809.3 True False 2020.0211019909832 2349.5881668818756 2052.0113315195085 2291.4752593403077 2965.9454049025658 2584.975971282857 2642.6610510042688 1825.9194078420135 2042.7251652120958 2289.4980509384836 2463.7739096199684 0.8198889898556345 0.9536541310498309 0.832873228954692 0.9300671828665328 1.2038220687871706 1.0491936622876177 1.072606963116958 0.7411067227851509 0.8291041467872275 0.9292646707552941 1.0 11.266654156589512 -4.262649701641003 1.1534338698870223 0.9413175064845306 2.6935219003978505e-07 0.08007802967442268 0.12297334859042491 34.40536349595481 6.321842699282129 0.01983447258791613 67.1300096879199 5.461982424757662e-05 4.262649701641003 -0.9413172371323406 HDS(ph)PDPS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 HDSPDPSPPR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(1)PDPS(1)PPR 49.928999999999995 0.009837299999999998 7279100.0 0.0 0.0 0.0 141.81 155.97 110.31 113.86 0.0 139.41 300.65 110.82 True False 0.0 0.0 0.0 176.55345636609275 133.0270196122096 121.98293098214823 134.54688817228782 0.0 107.83385759202389 232.73295618950652 83.30033552359525 0.0 0.0 0.0 2.1194807350575804 1.5969565881823973 1.4643750258076205 1.6152022357001998 0.0 1.294518886559339 2.793901785948794 1.0 6.380250401489615 -6.225027516828239 23.871003782998535 1.2029627920842887 1.0206127054322528e-06 0.4425072024826363 0.6915921625244357 203.0170319320401 133093.93036630936 0.06924935998377942 0.18320813872369912 5.956244036673989e-07 6.225027516828239 -1.2029617714715832 HDS(ph)PDPS(ph)PPR ddPTM_A549_PD325901_60min_R1 3 HDSPDPSPPR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(1)PDPS(1)PPR;HDS(1)PDPS(1)PPR;HDS(1)PDPS(1)PPR 70.488 0.0035591999999999998 33970500.0 768.51 744.43 807.8100000000001 832.5699999999999 1098.28 713.66 687.61 718.3399999999999 1022.53 816.36 789.06 True False 846.5285694528401 807.1657286773119 862.6328443561482 883.9959579963396 1021.1406016603112 707.8481895732185 713.7773748246295 704.0121451731715 979.5566200438594 764.8148902791311 692.0106222634573 1.2232884037010574 1.166406558958879 1.2465601200377714 1.2774311976670656 1.4756140567905183 1.0228863066551768 1.0314543619142384 1.0173429749827525 1.4155225202178032 1.1052068648564128 1.0 9.434650372967933 -7.286644741812099 24.957737552823968 1.161317795831059 1.2699055736860212 0.23585431107903476 0.13696426893168367 1615.385248012239 1599511.177151559 0.027219551828107997 0.04352523257541879 5.1683897699192464e-08 7.286644741812099 0.10858777785496221 HDS(ph)PDPS(ph)PPRR ddPTM_A549_MK2206_60min_R1 2 HDSPDPSPPRR 11 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(1)PDPS(1)PPRR;HDS(1)PDPS(1)PPRR 48.70399999999999 0.007385500000000001 19703500.0 543.94 844.4 601.71 618.0799999999999 1039.53 808.8900000000001 563.4 694.03 928.37 1044.81 910.94 True False 635.7437739437987 887.376353275991 687.0415258454606 769.5096277466652 886.6165140570641 894.4862029022747 665.7624872322762 792.410877877734 718.0956773022544 808.7866953479405 684.7284573349928 0.9284611543941877 1.2959536642156175 1.0033780814652722 1.123817214697993 1.2948439699845873 1.3063371228700975 0.9723014723580594 1.1572629549556743 1.048730587446488 1.1811787383509522 1.0 9.419388161899429 -8.795039560012803 1.0384488656195472 1.0141796273528798 1.1497148710660983 0.0 0.1339138361707234 0.570302199887124 1.230210493862519 0.026286418196443975 0.027234642897688247 1.6030993572444443e-09 8.795039560012803 0.13553524371321846 HDS(ph)PDPS(ph)PPRR ddPTM_A549_PD325901_60min_R1 2 HDSPDPSPPRR 11 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(1)PDPS(1)PPRR;HDS(1)PDPS(1)PPRR 52.265 0.005714899999999999 25191000.0 626.36 848.53 977.27 1095.1 1276.5700000000002 1191.56 1067.9299999999998 917.96 952.3000000000001 1101.81 958.8299999999999 True False 689.947606098139 920.0386010162944 1043.5934190019098 1162.7418398474501 1186.908127127421 1181.8563304204592 1108.570660543719 899.6505676743113 912.2781427124565 1032.2415285639293 840.8999885241569 0.820487115606993 1.0941118011322983 1.2410434454084072 1.3827349931210606 1.4114735917769896 1.4054659847180002 1.3183145150106903 1.0698663098488872 1.0848830481179739 1.22754375389586 1.0 9.71579041517769 -8.355647235125153 5.455803285228845 1.0421314785068005 1.2518234346961423 0.11183912835876153 0.1705647981826009 0.24728268603672876 11.420376113522341 0.02831727256713041 0.03432784824526612 4.409128588836897e-09 8.355647235125153 0.20969195618934178 HDS(ph)PEDVK ddPTM_A549_MK2206_60min_R1 8 HDSPEDVK 8 0 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK 161.51 0.00021157 691439000.0 22057.440000000002 26829.1 28235.5 27213.8 32964.9 26822.9 25704.5 28061.5 27758.1 40065.9 29563.4 True False 25780.19661936779 28194.586593648626 32239.718474031517 33881.18222167389 28115.80687833897 29661.281474399977 30374.674925562747 32039.303559739532 21470.93467057713 31014.98536302396 22221.991871668073 1.1601208734234238 1.2687695484937744 1.4508023700222636 1.524669004351077 1.265224424556883 1.3347715022889837 1.3668745403641758 1.4417836053926398 0.9662020756092301 1.3956888087321513 1.0 14.439700518264894 -8.767973256018996 24.995483541362123 0.9840398381892136 1.3550053059648692 0.18295586753686965 0.15653887638632913 52.554081116917274 201046.160083374 0.016839232227923797 0.018133014363823505 1.7061874532897048e-09 8.767973256018996 0.37096546777565564 HDS(ph)PEDVK ddPTM_A549_PD325901_60min_R1 10 HDSPEDVK 8 0 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK 160.18 0.00025749 890487600.0 31871.46 35708.1 39616.3 42513.2 49071.9 43648.700000000004 42952.0 29064.539999999997 43315.7 38572.1 39196.5 True False 35107.0271566712 38717.34690458785 42304.90035016464 45139.1438095175 45625.2590328647 43293.239458880395 44586.56186423624 28484.82494900945 41495.29176340429 36136.65102324424 34375.578987085435 1.021278133812977 1.1263038484132464 1.2306672817367867 1.3131166118387658 1.3272579074233384 1.2594184806354893 1.2970417714560376 0.8286354961384336 1.207115428630123 1.0512303236207432 1.0 15.069096392558105 -11.409398801199599 0.34573382101246264 0.8768670846312939 1.2054855312969137 0.16593851395518988 0.1387882146400118 6.0130568737433245 0.628178764646262 0.7871109619550917 0.050639775772636966 3.895840775611327e-12 11.409398801199599 0.3286184466656198 HDS(ph)PEDVKR ddPTM_A549_MK2206_60min_R1 4 HDSPEDVKR 9 1 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR 109.24 9.062399999999999e-05 416485000.0 8241.9 11053.9 11525.2 10567.8 15654.7 12192.7 11877.5 11873.499999999998 16765.0 16413.4 12527.599999999999 True False 9632.931224891336 11616.496294975697 13159.646663133577 13156.91147440657 13351.914367655692 13482.923421140771 14035.488005149731 13556.60498606872 12967.754268203727 12705.601540398633 9416.651175829194 1.022967830603866 1.2336122553624052 1.3974869003231172 1.3971964373256103 1.4179047432411633 1.4318172319846516 1.4904967533655955 1.4396418358222745 1.3771089133565402 1.3492696398281767 1.0 13.200998373056354 -10.564277356046746 0.8663416730432586 1.0005470246443537 1.3644966158865834 0.012656856349612666 0.15839498591101944 0.3815658460990176 0.513663640063844 0.08650031859059892 0.02423828423213244 2.7272355160254843e-11 10.564277356046746 0.3639495912422297 HDS(ph)PEDVKR ddPTM_A549_PD325901_60min_R1 4 HDSPEDVKR 9 1 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR 120.77 2.9784e-05 770122000.0 11998.5 14330.199999999999 16671.3 16260.099999999999 18603.9 17208.0 17857.6 13732.100000000002 18538.9 17203.9 13831.2 True False 13216.578887171152 15537.856245841273 17802.714670670888 17264.449447633557 17297.226243970814 17067.863753294227 18537.18074005366 13458.202492875955 17759.774503761375 16117.642817964057 12130.050083200695 1.0895733155690122 1.2809391667195307 1.4676538471449885 1.423279321125282 1.4259814366245949 1.4070728180201064 1.528203149443415 1.1094927391532095 1.4641138644891063 1.3287367082091368 1.0 13.566297886696752 -10.882849991878766 0.9375089809727312 0.9816116462288801 1.3679210712447978 0.03831599955743459 0.16642499057700622 0.42744684715540915 0.6120409603031339 0.11965444081568373 0.02370378093489601 1.3096342010032531e-11 10.882849991878766 0.3863094250159177 HDS(ph)PEDVKRR ddPTM_A549_MK2206_60min_R1 2 HDSPEDVKRR 10 2 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVKRR;HDS(1)PEDVKRR 107.17 5.6186e-05 59405000.0 2006.52 3529.2 3560.2 3029.9 5164.0 2399.8999999999996 2388.8199999999997 2236.25 6363.6 5356.9 4256.3 True False 2345.1715212959366 3708.82120556801 4065.089894326185 3772.225636017381 4404.382440709435 2653.855825075311 2822.837672613075 2553.2452857284 4922.254760581045 4146.772569471369 3199.3432420959966 0.7330165424074775 1.1592445464332979 1.2706013661925841 1.1790624983226463 1.3766520524456067 0.8295001893378221 0.8823178568248088 0.7980529416580148 1.5385203737490547 1.2961324420929214 1.0 11.643560065207359 -8.755340249774319 24.999961587858127 1.2543012850297464 1.0460907884579382 0.18765550136416453 0.22776224538777842 252.34087871631968 1034328.4537597774 0.0466194851993373 0.05220651499407926 1.75654690093538e-09 8.755340249774319 -0.20821049657180812 HDS(ph)PEDVKRR ddPTM_A549_PD325901_60min_R1 2 HDSPEDVKRR 10 2 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVKRR;HDS(1)PEDVKRR 136.7 1.028e-07 94878000.0 2630.2 3600.5 5524.4 6319.0 5054.2 10791.3 8070.599999999999 5185.1 7578.700000000001 5829.4 4728.0 True False 2897.215967749098 3903.92677095585 5899.319004915891 6709.310278509758 4699.210428043433 10703.41923064411 8377.731099401777 5081.679112867743 7260.193594639182 5461.330689148372 4146.485973261383 0.6987159697227476 0.9415024664572179 1.422727351052832 1.618071379422178 1.1332994874084452 2.5813229080395095 2.0204412009170127 1.2255387201685846 1.7509268429838047 1.3170985563114805 1.0 12.017673496653806 -5.6748080534393255 2.7960761550003745 1.487883192750166 0.7273571020279437 0.30332275210338155 0.42955823973678636 0.3111547927514403 4.632442688101082 0.06740953226584068 0.3562593522891396 2.1144233519946993e-06 5.6748080534393255 -0.7605260907222222 HDSDT(ph)S(ph)PPRR ddPTM_A549_MK2206_60min_R1 1 HDSDTSPPRR 10 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(0.428)DT(0.805)S(0.767)PPRR 45.137 0.020621 15453000.0 455.43 695.76 587.18 641.84 766.03 746.4 632.19 581.42 769.83 929.22 516.92 True False 532.2954498055383 731.1712121687634 670.450953359488 799.0908288132929 653.3480017538046 825.3835525797786 747.0507398000938 663.8380655240728 595.4647341658979 719.308556628682 388.554497733774 1.3699376867598412 1.8817726121645366 1.7255004311360749 2.0565733596547022 1.6814835642475545 2.1242414060158605 1.9226408242787882 1.7084812282340764 1.5325127817048012 1.851242388967354 1.0 8.601973151589736 -9.658525365083868 0.6851801774353561 1.0475583489626448 1.8359194916915549 0.0 0.309015871936999 0.24649218386648508 0.2481230585695 0.08475697027542399 0.04569219529745905 2.19520273400046e-10 9.658525365083868 0.7883611427289101 HDT(ph)PDPS(ph)PLR ddPTM_A549_MK2206_60min_R1 3 HDTPDPSPLR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDPS(1)PLR;HDT(1)PDPS(1)PLR;HDT(1)PDPS(1)PLR 90.61399999999999 0.0010045 66366000.0 1995.8 2698.73 3055.2299999999996 2627.96 3337.11 2933.8199999999997 2174.62 2930.1000000000004 4312.3 3242.08 2990.66 True False 2332.642247374773 2836.0838297921805 3488.507555149205 3271.810317973606 2846.2255396428845 3244.274885087896 2569.720305262784 3345.450648054909 3335.5709353280595 2509.6918762776495 2247.9965839829943 1.0376538220720086 1.2616050442422002 1.5518295623778382 1.4554338477581763 1.2661164878640294 1.4431849710997775 1.1431157518530393 1.488192051487662 1.4837971548062159 1.1164126734707862 1.0 11.134424127927982 -10.891986712201675 1.1313323623940494 0.9991226055316464 1.362806487220153 0.3310914251476367 0.15533432356492788 0.37937246080835185 0.8589613895639108 0.1083118169440333 0.02569302123561482 1.2823698178099362e-11 10.891986712201675 0.3636838816885066 HDT(ph)PDPS(ph)PLR ddPTM_A549_PD325901_60min_R1 3 HDTPDPSPLR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDPS(1)PLR;HDT(1)PDPS(1)PLR;HDT(1)PDPS(1)PLR 81.92 0.0016539999999999999 62871000.0 3224.17 3846.6400000000003 4191.02 3823.6400000000003 5294.66 5580.3 3809.83 2755.9 4346.8 4123.4800000000005 3728.07 True False 3551.485364891495 4170.809852584253 4475.44781985059 4059.8175586835046 4922.781347185403 5534.855886942569 3954.815165468972 2700.931412538273 4164.119112404183 3863.1227690825012 3269.541024182861 1.086233614633754 1.27565606968539 1.3688306055034485 1.2417087073248005 1.505649053116172 1.6928540874711508 1.2095933760174726 0.8260888585159449 1.2736096845412421 1.1815489515223292 1.0 11.67487241010715 -10.186564851648614 0.3731574351555559 0.9555660744964596 1.3277859805004153 0.12332801968606844 0.2096523312184104 2.3588337109383306 0.5541075829464913 0.34745843264435894 0.08421925577636102 6.50781424711411e-11 10.186564851648614 0.3722199060039557 HDT(ph)PDPS(ph)PR ddPTM_A549_MK2206_60min_R1 3 HDTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDPS(1)PR;HDT(1)PDPS(1)PR;HDT(1)PDPS(1)PR 69.979 0.0057439 14677500.0 397.03 304.40999999999997 345.9 325.15 744.07 456.34 468.23999999999995 433.669 507.53 612.56 653.59 True False 464.03895754845496 319.9031687597636 394.95382125931917 404.8117645965383 634.6182886635692 504.6295959060239 553.3131470032674 495.14290880561214 392.57526535886876 474.18227055860336 491.2855648336638 0.9445401834787599 0.6511552377242639 0.8039190432819658 0.8239846508284785 1.2917503262658125 1.0271614556329942 1.1262556578282623 1.0078515312642136 0.7990775497175137 0.9651866541593764 1.0 8.940418039592666 -6.5472995215384655 24.999792553636556 0.9633232606387695 0.7898249034121926 0.313884415966885 0.13887844042753514 271.39053615015564 277824.3319001318 0.02258348202616665 0.04701285337306282 2.835962464730343e-07 6.5472995215384655 -0.17349835722657692 HDT(ph)PDPS(ph)PR ddPTM_A549_PD325901_60min_R1 3 HDTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDPS(1)PR;HDT(1)PDPS(1)PR;HDT(1)PDPS(1)PR 76.143 0.0030769 17620400.0 499.13 420.96 549.1800000000001 296.882 583.44 524.13 592.6800000000001 317.75 382.74 413.55 471.79 True False 549.8013101599144 456.43577655924855 586.4506572876169 315.21972687205795 542.4611871587318 519.8616590547477 615.2347617269402 311.41222697994715 366.65476881420267 387.4383824231153 413.76282092322106 1.328783743626731 1.1031338570749594 1.4173594814030916 0.7618367599310015 1.3110438147834274 1.2564242913241706 1.4869261582134872 0.752634628420937 0.8861472086740246 0.9363779509203641 1.0 8.692660205974404 -8.271702670508038 24.96733361838634 0.9302138442602086 1.2248585628113922 0.42902641754824555 0.18890865750869026 551.6697345469228 1342034.949455272 0.02974551255075624 0.036163432678835546 5.349304616071254e-09 8.271702670508038 0.29464471855118357 HDT(ph)PDPSPLR ddPTM_A549_PD325901_60min_R1 2 HDTPDPSPLR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 HDT(0.982)PDPS(0.018)PLR;HDT(0.978)PDPS(0.022)PLR 73.781 0.001761 5139800.0 3097.3 3090.8 3861.8999999999996 3842.9 4218.6 3675.5 3026.7 3184.8999999999996 4676.1 3874.6000000000004 3447.5 True False 3411.735615888253 3351.272563163545 4123.991757491253 4080.2672051408704 3922.30008937993 3645.5679466081424 3141.8827247737895 3121.3746709942825 4479.579778575782 3629.957094756629 3023.4793555030938 1.1284137295921954 1.1084158908060107 1.3639887270885762 1.3495270598472242 1.2972802616432206 1.2057525512693754 1.0391612957618472 1.0323783641231112 1.4815976072144867 1.2005893435818151 1.0 11.561994012877618 -7.4816188897783755 20.76869311190489 1.1991450534172226 1.2533922189512958 0.05146199495690573 0.14550339859875758 344.8812641201745 173598.00592738943 0.030032648422386825 0.0480002551040434 3.298990844098652e-08 7.4816188897783755 0.05424716553407327 HDT(ph)PDPSPR ddPTM_A549_MK2206_60min_R1 1 HDTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 HDT(1)PDPSPR 57.019 0.012786 3405500.0 346.13 591.5 230.83 359.21 821.66 551.53 408.23 491.77 791.28 525.69 451.99 True False 404.5482819339764 621.6048234992293 263.56516496469715 447.21646612554946 700.7949024464201 609.8925385240162 482.4001067852894 561.479903482462 612.0563434145089 406.9362638924386 339.7484087106101 1.19072899699307 1.8296033404786247 0.7757657084104136 1.3163165879798961 2.0626878139209803 1.79512993405514 1.4198745142502984 1.652634387938275 1.8014987788679961 1.1977576743826859 1.0 8.408322983590974 -3.7430054456519466 12.570861889447256 1.447164914099084 1.4065355896675291 0.0 0.3826391835504062 0.0 0.0 0.05487751583375639 0.0 0.00018071514658574888 3.7430054456519466 -0.04062932443155498 HDT(ph)PDPSPR ddPTM_A549_PD325901_60min_R1 2 HDTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 HDT(1)PDPSPR;HDT(1)PDPSPR 63.408 0.0060012 5111800.0 1040.64 713.9 671.5999999999999 1158.87 1023.22 937.22 685.12 499.40000000000003 993.75 972.33 1006.25 True False 1146.2850067213224 774.062858432268 717.1788146588793 1230.4507679152719 951.3525571173681 929.5875910543008 711.1926165120492 489.4390752282792 951.9861433587138 910.9369178611246 882.4876291443036 1.2989247314807206 0.8771373477301107 0.8126786041797385 1.3942980357791164 1.078035006609485 1.0533718098186455 0.8058952817295024 0.5546129589406931 1.078752961423152 1.0322376062590324 1.0 9.785432244365616 -7.5416389105796755 24.63326671452099 0.9763686578402831 1.0799371611160995 0.12203681679352674 0.20898851667597218 558.194274437793 732941.0190842703 0.033484636293257805 0.0496704516208011 2.8731684538428666e-08 7.5416389105796755 0.10356850327581635 HDT(ph)PDS(ph)SPR ddPTM_A549_MK2206_60min_R1 3 HDTPDSSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDS(0.579)S(0.421)PR;HDT(0.999)PDS(0.539)S(0.462)PR;HDT(1)PDS(0.571)S(0.429)PR 88.681 0.0016964000000000003 6735100.0 253.23 146.97 229.70299999999997 145.73 117.53 0.0 0.0 100.05 0.0 370.73 277.13 True False 295.9690331209109 154.45014524037475 262.2783394181249 181.4338565420683 100.24149269104953 0.0 0.0 114.23239389027457 0.0 286.98183551683263 208.31097260110042 1.420803856010355 0.7414402770618088 1.2590711672225154 0.8709759945747085 0.48121081400260335 0.0 0.0 0.5483743485227773 0.0 1.3776606768880144 1.0 7.702595023873721 -6.647446710132122 3.324602902905487 0.43437635723912965 1.09768798890057 0.30579732786925784 0.43170759499404815 0.2240417322316869 4.872508361677437 0.06249193489458087 0.1376017528694971 2.2519217206207059e-07 6.647446710132122 0.6633116316614402 HDT(ph)PDS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 HDTPDSSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDS(0.687)S(0.313)PR;HDT(1)PDS(0.558)S(0.443)PR 84.17 0.0020976999999999997 11076300.0 788.06 1093.61 852.7 1105.8899999999999 1077.18 723.78 727.91 292.975 1046.19 926.1299999999999 666.98 True False 868.0632710608899 1185.7723527246283 910.5693497016467 1174.1983136415815 1001.5225928692631 717.8857756484938 755.6110133776353 287.13138379055863 1002.2222725237256 867.6539937456653 584.9456883345767 1.484006615267802 2.0271494881869976 1.5566733251665923 2.007362969004337 1.7121633902811384 1.2272691122699209 1.2917626857443243 0.4908684507241388 1.713359534929122 1.4833069309665299 1.0 9.192158867790667 -7.2188488215583195 5.183844968859759 1.2633081871766125 1.7799380020059943 0.4119852738791179 0.32635131357269787 0.19565930550967128 13.099963648032666 0.05388351982204734 0.09331885179517242 6.041589012306466e-08 7.2188488215583195 0.5166298148293818 HDT(ph)PDS(ph)SPRR ddPTM_A549_MK2206_60min_R1 1 HDTPDSSPRR 10 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(0.988)PDS(0.54)S(0.472)PRR 43.382 0.028464999999999997 5923500.0 308.52 351.3 393.67 356.34 540.17 310.17 361.56 572.3 441.47 471.63 404.99 True False 360.59063341019373 369.1796694763805 449.4983255714257 443.6433159967102 460.7117085588723 342.9919835258175 427.25077189155445 653.4252775952435 341.4777498827257 365.08845543873923 304.4198058446205 1.1845176512406144 1.2127320968886441 1.47657385275666 1.457340512933482 1.5134091137093264 1.1267071883650195 1.4034920320185353 2.1464611206301063 1.121733025665945 1.199292714959173 1.0 8.249918414793171 -8.973294802113474 24.997523565865453 1.053705268388341 1.438192156226043 0.24188747744285732 0.2605295774544295 156.10074424203768 146120.18204813727 0.044950874989790494 0.046902618050793606 1.063420915657613e-09 8.973294802113474 0.3844868878377019 HDT(ph)PDS(ph)SPRR ddPTM_A549_PD325901_60min_R1 2 HDTPDSSPRR 10 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(0.995)PDS(0.556)S(0.448)PRR;HDT(0.989)PDS(0.545)S(0.466)PRR 46.063 0.01648 19184200.0 696.7 824.45 668.1899999999999 738.8299999999999 1022.7900000000001 694.73 700.19 395.78 932.84 968.1300000000001 780.1 True False 767.428471116568 893.9292949075265 713.5373915528834 784.4658510953255 950.9527588339485 689.0723492169973 726.8361136086702 387.88585741659614 893.6359788384832 907.0021065779008 684.1526454613384 1.121721119121121 1.3066225802645715 1.0429505700028834 1.1466240119065008 1.3899716169228598 1.00719094457691 1.0623888081563282 0.5669580611722062 1.3061938512799083 1.3257306137671812 1.0 9.418174439273109 HDYDDS(ph)SEEQSAEDSYEASPGSETQR ddPTM_A549_MK2206_60min_R1 1 HDYDDSSEEQSAEDSYEASPGSETQR 26 0 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 HDYDDS(0.825)S(0.175)EEQSAEDSYEASPGSETQR 109.44 6.725300000000001e-13 3464500.0 0.0 0.0 0.0 0.0 0.0 242.32 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 267.9621415610024 0.0 0.0 0.0 0.0 0.0 0.0 HEAPS(ph)SPISGQPCGDDQNASPSK ddPTM_A549_MK2206_60min_R1 2 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 HEAPS(0.5)S(0.5)PIS(0.001)GQPCGDDQNASPSK;HEAPS(0.498)S(0.498)PIS(0.003)GQPCGDDQNASPSK 98.96700000000001 4.0201000000000004e-08 16106700.0 2543.0 3065.2 2548.0 2414.5 4366.5 3641.0 3126.6 3911.3 5085.700000000001 4139.9 4203.7 True False 2972.1962296192255 3221.2055874722496 2909.3447139888553 3006.0526083910217 3724.1936342675713 4026.2882032998077 3694.6627486340676 4465.738752853887 3933.797070194074 3204.693714714579 3159.805273782145 0.9406263905818602 1.0194316764389126 0.9207354447214086 0.9513410947608527 1.1786149181939554 1.2742203567755053 1.1692691253128147 1.4132955565038974 1.24494920710272 1.01420607823681 1.0 11.625619938252767 -6.759848628042551 24.97691239389035 1.1610013642661536 0.9597550348564177 0.48132521857204624 0.11155413241811478 37.642780887240676 591021.6480669546 0.019228291408528823 0.03842438550943668 1.7384066392599047e-07 6.759848628042551 -0.20124632940973597 HEAPSS(ph)PISGQPCGDDQNAS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 2 HEAPS(0.169)S(0.83)PIS(0.001)GQPCGDDQNAS(0.924)PS(0.076)K 92.23100000000001 2.8821999999999997e-07 4680100.0 835.84 1074.0 873.71 779.09 1228.3 1091.9 861.67 906.58 1293.4 1298.6 1119.2 True False 976.9093576739806 1128.6620125751006 997.6152158788078 969.9670849746786 1047.6186971191717 1207.444133255441 1018.22428536286 1035.0904912848089 1000.4469651353827 1005.2453580831309 841.2717516513966 1.1612292410345773 1.341614062708707 1.1858418090474483 1.1529771243009839 1.245279774416199 1.4352605218055363 1.210339326578017 1.2303877899774367 1.1892078429728907 1.1949115801283687 1.0 9.716428091838136 -10.048346440786476 0.616390492644049 0.9991731491304059 1.2511061792945448 0.16907422235439507 0.09543586621678195 0.4244945995883054 0.3140054018078548 0.05129972418752078 0.018254033548910965 8.946508094707458e-11 10.048346440786476 0.2519330301641389 HEAPSS(ph)PISGQPCGDDQNAS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 HEAPSSPISGQPCGDDQNASPSK 23 0 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 2 HEAPS(0.465)S(0.532)PIS(0.003)GQPCGDDQNAS(0.94)PS(0.06)K 84.152 9.1076e-06 6174100.0 964.92 1232.4 1435.3 1792.4 1640.3 1330.1 1752.0 1480.0 1325.9 1736.0 1658.1 True False 1062.8779680634398 1336.2586731081765 1532.7080891600492 1903.1124771642487 1525.0909867277996 1319.2681065932486 1818.6733187311866 1450.4802389624613 1270.1770339414527 1626.3886637323858 1454.164211561909 0.7309201805494917 0.9189186905328313 1.0540130729209576 1.3087328528874516 1.0487749420608479 0.9072346136040789 1.2506657118027684 0.9974666048234739 0.8734756527786935 1.1184353533123275 1.0 10.50597447952423 -8.527913402536234 24.261930961609067 0.9400007351633919 1.0408423768544295 0.0 0.16086700623210465 196.56197031554214 947222.2379885345 0.026325372433824625 0.029904296004225554 2.9654226300043388e-09 8.527913402536234 0.1008416416910376 HEDEQALLDQNS(ph)QTPPPS(ph)PFSVQAFNK ddPTM_A549_MK2206_60min_R1 1 HEDEQALLDQNSQTPPPSPFSVQAFNK 27 0 A0A499FJI4;O75592-2;O75592;A0A087WY34 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 2 HEDEQALLDQNS(0.758)QT(0.31)PPPS(0.866)PFS(0.066)VQAFNK 52.347 0.002614 2252800.0 417.71 464.22 314.17 534.78 656.68 550.71 492.51 594.23 574.21 760.19 560.31 True False 488.20923597099744 487.84681515606474 358.7240301388851 665.8011240071863 560.0832418987357 608.985766668288 581.9926918472988 678.4639222530524 444.1523518249484 588.462551025116 421.169563230695 1.1591750178385554 1.1583145073777503 0.8517330345222371 1.5808386505899874 1.3298283893130018 1.4459396400748856 1.381848886189606 1.610904446771299 1.0545689684172752 1.3972105356122007 1.0 8.718257370291342 -8.96290251069119 24.951142461265622 1.0240743558271483 1.3115540229849458 0.019611003263184545 0.23029762093599582 148.55212275007904 99914.22153969496 0.03564042140466074 0.037843296316071195 1.0891745609990641e-09 8.96290251069119 0.2874796671577975 HEDEQALLDQNS(ph)QTPPPSPFSVQAFNK ddPTM_A549_MK2206_60min_R1 2 HEDEQALLDQNSQTPPPSPFSVQAFNK 27 0 A0A499FJI4;O75592-2;O75592;A0A087WY34 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 HEDEQALLDQNS(0.499)QT(0.499)PPPS(0.002)PFSVQAFNK;HEDEQALLDQNS(0.5)QT(0.5)PPPS(0.001)PFSVQAFNK 102.67 8.0068e-13 20743000.0 466.71000000000004 1204.6100000000001 871.81 1003.24 949.49 992.41 1234.5 1102.1799999999998 1436.87 1215.8899999999999 1436.5900000000001 True False 545.4792380360154 1265.9195036946853 995.4457673087228 1249.0338450371553 809.8212787817973 1097.4261674915576 1458.7926703731716 1258.4173902846867 1111.4212392098948 941.21960452772 1079.8450551330232 0.505145840547299 1.1723158777985423 0.9218412980426127 1.1566787652542339 0.7499421096872436 1.0162811435538488 1.3509277682375154 1.1653684797673733 1.029241402668628 0.8716246836096071 1.0 10.07660860239531 -7.508917193515084 24.744387079938743 1.0566915431287967 0.9267415397023883 0.1432560834501171 0.20422930163162797 1118.1230901235997 1981677.034029725 0.02847456351416569 0.04441805503667586 3.0980099372944774e-08 7.508917193515084 -0.1299500034264084 HEDEQALLDQNSQT(ph)PPPSPFSVQAFNK ddPTM_A549_PD325901_60min_R1 2 HEDEQALLDQNSQTPPPSPFSVQAFNK 27 0 A0A499FJI4;O75592-2;O75592;A0A087WY34 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 HEDEQALLDQNS(0.123)QT(0.875)PPPS(0.003)PFSVQAFNK;HEDEQALLDQNS(0.066)QT(0.934)PPPS(0.001)PFSVQAFNK 128.52 4.3878999999999996e-24 17344900.0 1992.33 1394.73 1345.83 1945.1 1782.38 1740.68 1992.4299999999998 2404.6 2134.96 2394.5 1995.03 True False 2194.5898749241733 1512.268791905361 1437.166116933234 2065.244409357388 1657.1917776771909 1726.504479200614 2068.2530139495293 2356.6383666277934 2045.2350557233913 2243.310861352072 1749.6539575371526 1.254299380440531 0.8643245056491401 0.8214002035900958 1.1803730677490463 0.9471540189637766 0.9867691104079094 1.1820926103929963 1.3469168325975978 1.168936890013557 1.2821454503551095 1.0 10.772853902085135 -7.742280266966445 24.7988789688666 1.1130638466975173 0.9989187293509929 0.19154941500648526 0.15212034983621583 387.51160187912404 501580.0185877492 0.02334191064272751 0.03459015706731463 1.8101715421464924e-08 7.742280266966445 -0.11414511734652444 HEDGTQS(ph)DSEDPLAK ddPTM_A549_PD325901_60min_R1 1 HEDGTQSDSEDPLAK 15 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 HEDGT(0.021)QS(0.777)DS(0.203)EDPLAK 94.384 6.8297e-06 8838000.0 2746.8 2709.8 2498.3 2304.2 3199.9 3697.5 3091.7 3413.1 3310.2 3112.1 3386.6 True False 3025.6531139127155 2938.1643560439284 2667.849661498331 2446.525200782114 2975.1500630557143 3667.388785902217 3209.3563353431555 3345.023042974849 3171.083805530581 2915.6014748856924 2970.0696694261856 1.0187145254734946 0.9892577222310003 0.8982448085178274 0.8237265361033703 1.0017105301204972 1.2347820738530866 1.0805660110872752 1.1262439657252565 1.0676799396908527 0.981660970750556 1.0 11.536281057626441 -6.996666853666339 24.999353387591004 1.0597263534785677 0.9314231353052095 0.4252233140416112 0.07913858684647954 90.46746944372647 678513.4862171836 0.012036158978179546 0.02266910476815583 1.0077043802359808e-07 6.996666853666339 -0.1283032181733582 HEDLQTDES(ph)SMDDRHPR ddPTM_A549_PD325901_60min_R1 1 HEDLQTDESSMDDRHPR 17 1 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 HEDLQT(0.013)DES(0.493)S(0.493)MDDRHPR 43.696000000000005 0.018571 3409600.0 420.37 439.65 311.6 651.38 667.61 473.12 421.79 536.13 462.9 575.92 545.48 True False 463.0456529399622 476.70084845180907 332.7470498030179 691.6142632086857 620.7193767294677 469.267067582436 437.8414492623441 525.4364665641511 443.4459227781117 539.5563129128781 478.38941808261865 0.967926202874315 0.9964703031317512 0.6955568773587545 1.4457139666271688 1.2975190363058333 0.9809311198045623 0.9152406652664047 1.098344667969657 0.9269559610148564 1.1278600498217872 1.0 8.90204166741991 -7.480468538952743 24.9827583469567 0.9721842397525345 1.08128751650771 0.016410450440306867 0.18940309987912585 1075.3389705845295 633454.8610847481 0.027831951585844256 0.04449030517758312 3.3077407304023305e-08 7.480468538952743 0.1091032767551755 HEEAPGHRPTTNPNASK ddPTM_A549_MK2206_60min_R1 3 HEEAPGHRPTTNPNASK 17 1 E9PP21;P21291;E9PS42;E9PND2 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 0 ;; 111.43 1.6043e-08 108157500.0 1628.58 2243.9 2448.47 2255.22 2672.92 2399.12 2105.58 2421.83 3872.21 3221.85 2228.55 False True 1903.4444890417922 2358.104925528183 2795.699863367464 2807.749001240672 2279.737008795714 2652.993285993033 2488.1366309310183 2765.131819043314 2995.160617648742 2494.0318473279945 1675.139530148963 1.136290114813616 1.4077065719525383 1.6689355203257927 1.6761284362927014 1.360923653083983 1.5837446602177154 1.4853309746142513 1.6506874617169487 1.7880066488445863 1.4888502136333746 1.0 10.71006555400572 -10.953467288307094 1.2223229707848307 1.0006722757723416 1.5561665366576658 0.05355984819177084 0.2227877592019417 0.28214294266639556 0.7508719389754278 0.13030516978145923 0.030499649479897063 1.1130962296735853e-11 10.953467288307094 0.5554942608853242 HEEAPGHRPTTNPNASK ddPTM_A549_PD325901_60min_R1 2 HEEAPGHRPTTNPNASK 17 1 E9PP21;P21291;E9PS42;E9PND2 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 0 ; 88.992 1.5664e-05 131000000.0 3686.6000000000004 4472.0 4972.9 5041.6 7224.9 6186.9 5861.7 6286.5 5381.0 5167.3 4157.0 False True 4060.8609180685226 4848.871134485366 5310.390898476983 5353.008181695649 6717.447948551898 6136.515937660158 6084.770201145318 6161.110825836156 5154.855282931559 4841.035796143065 3645.715353394157 1.113872182667214 1.330019122302314 1.456611496981797 1.4683011872311986 1.8425596343658486 1.6832131263202073 1.66901955071188 1.6899593711012488 1.4139489190049888 1.3278699313801519 1.0 11.831986209100647 -10.014868199236382 0.8543754845820876 1.0372894806757933 1.533830130206743 0.26404653044410187 0.21018801276604904 0.3530509723411527 0.5206502208634728 0.08895993939039654 0.04197866760910841 9.663441029920687e-11 10.014868199236382 0.4965406495309497 HEEQPAPGYDT(ph)HGR ddPTM_A549_MK2206_60min_R1 1 HEEQPAPGYDTHGR 14 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HEEQPAPGY(0.008)DT(0.992)HGR 76.71300000000001 0.00068484 9060600.0 485.8 329.55 367.96 293.12 439.89 549.32 409.57 402.75 384.49 674.95 713.46 True False 567.791163330326 346.32268737814195 420.1422609730532 364.9344131586566 375.18276371875936 607.4486777908954 483.9835674400485 459.8410458701458 297.4036289043633 522.4783262268666 536.2881915057233 1.0587426169801586 0.6457772012577421 0.783426276445562 0.6804819105452222 0.6995916927899678 1.132690757343317 0.902469185609289 0.8574513725149557 0.5545593462898193 0.974249171438806 1.0 9.066864676879124 HEEQPAPGYDT(ph)HGR ddPTM_A549_PD325901_60min_R1 2 HEEQPAPGYDTHGR 14 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HEEQPAPGY(0.005)DT(0.995)HGR;HEEQPAPGY(0.043)DT(0.957)HGR 65.949 0.0039559 19933400.0 1071.6299999999999 1057.69 1074.54 1296.76 1398.8 1256.74 1018.69 1241.37 1611.52 1373.92 1200.62 True False 1180.4210887076895 1146.825248263378 1147.4647461339375 1376.8579200443605 1300.5531135980289 1246.5055261108191 1057.456805398558 1216.6099015140746 1543.7934186117573 1287.1704567253457 1052.9513513572513 1.121059474576988 1.089153118788559 1.0897604572660065 1.3076177909545343 1.2351502392979692 1.1838206242900748 1.0042788814844097 1.1554284060188231 1.4661583525409907 1.2224405762585202 1.0 10.040223066916536 -6.217857730915727 24.01126556812799 1.207650314916027 1.098907129544971 0.10517655106801083 0.12293309933975864 682.0283709617553 375760.7108160646 0.024411731213545985 0.06458672515967598 6.055392088409165e-07 6.217857730915727 -0.10874318537105587 HEEQPAPGYDTHGR ddPTM_A549_MK2206_60min_R1 1 HEEQPAPGYDTHGR 14 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 49.216 0.027681 2182800.0 240.65 298.97 236.19 267.32 358.36 315.35 117.7 387.71 422.33 364.42 537.26 False True 281.26583667238145 314.1862959958824 269.68529356241305 332.8134120004506 305.6457187166215 348.72012768761147 139.08456646652274 442.6690798120776 326.6729293224263 282.097268899318 403.8435143783323 0.6964723380672729 0.7779901987024201 0.6677965200891255 0.824114787414071 0.756841964361185 0.8635031027412274 0.3444021298215632 1.096140123714782 0.8089096833096336 0.6985311360851548 1.0 8.657652560066508 -10.03212431595482 0.36773374480727156 1.0407578995985722 0.7234914589538437 0.0 0.18737322329109238 1.809772819379726 0.4478976055431657 0.22530521649296856 0.06377978079373356 9.287005100050105e-11 10.03212431595482 -0.31726644064472853 HEEQQRELEEEEENS(ph)DEDELDSHTMVK ddPTM_A549_MK2206_60min_R1 4 HEEQQRELEEEEENSDEDELDSHTMVK 27 1 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 HEEQQRELEEEEENS(0.97)DEDELDS(0.023)HT(0.007)MVK;HEEQQRELEEEEENS(1)DEDELDSHTMVK;HEEQQRELEEEEENS(0.999)DEDELDS(0.001)HTMVK;HEEQQRELEEEEENS(1)DEDELDSHTMVK 107.0 4.8272e-13 25581300.0 3239.08 4110.18 3575.24 3193.4700000000003 4860.98 3811.84 3475.76 3083.9700000000003 5193.1 6535.52 5716.47 True False 3785.7575160971423 4319.370606001794 4082.2627924809735 3975.8702933603176 4145.9362813012685 4215.206378705391 4107.260601033823 3521.13219176202 4016.871141676633 5059.141492884229 4296.91273245413 0.8810412851775449 1.0052265137660448 0.950045543547597 0.9252853248172782 0.964863970819665 0.9809848701064793 0.9558631642695734 0.819456295951109 0.9348272566341942 1.1773898628829638 1.0 12.069084761859084 -10.523066366666809 1.0868090518485425 0.9964508916686384 0.9379185706398997 0.2627232707809617 0.07285804516839822 0.6157931056111098 1.3984175195473694 0.023510598629998047 0.008454716906668562 2.998704237291255e-11 10.523066366666809 -0.05853232102873873 HEEQQRELEEEEENS(ph)DEDELDSHTMVK ddPTM_A549_PD325901_60min_R1 5 HEEQQRELEEEEENSDEDELDSHTMVK 27 1 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 HEEQQRELEEEEENS(1)DEDELDSHTMVK;HEEQQRELEEEEENS(0.999)DEDELDS(0.001)HTMVK;HEEQQRELEEEEENS(1)DEDELDSHTMVK;HEEQQRELEEEEENS(1)DEDELDSHTMVK;HEEQQRELEEEEENS(1)DEDELDSHTMVK 163.55 8.702599999999999e-42 55870600.0 6755.67 6457.17 7795.92 7737.2 9014.95 8727.66 8694.47 8267.58 9610.71 8584.029999999999 8504.66 True False 7441.5006451386 7001.338377340084 8324.998011875303 8215.109271543864 8381.771011889155 8656.584830606445 9025.342813646543 8102.676631108957 9206.8052808443 8042.032880840277 7458.640735481634 0.9977019820432567 0.9386882443652087 1.116154847393615 1.1014217687766648 1.1237665560181873 1.160611582942459 1.2100519563453327 1.086347622639011 1.234381116796046 1.0782169521295453 1.0 12.864697021998365 -5.769820230136679 24.035050918245904 1.1216020604709276 0.9681951097104196 0.4831290196894682 0.06190855731548776 86.98454146285854 249464.58681677314 0.01184106484617974 0.03776388451312858 1.6989467611507321e-06 5.769820230136679 -0.15340695076050803 HEERQDEHGYISR ddPTM_A549_MK2206_60min_R1 2 HEERQDEHGYISR 13 1 P04792 P04792 HSPB1 Heat shock protein beta-1 0 ; 61.211999999999996 0.017535 7866700.0 0.0 0.0 290.24 175.38 145.75 124.46 154.02 0.0 263.5 468.44000000000005 294.84 False True 0.0 0.0 331.4003963061716 218.34810787310735 124.31036807385748 137.63027459013838 182.00344033282784 0.0 203.8176707230349 362.61907865429055 221.62309082996578 0.0 0.0 1.4953333385302774 0.985222735841316 0.5609089179666354 0.6210105367392942 0.8212295914258545 0.0 0.9196590028581832 1.6361971908987591 1.0 7.791964392869341 -6.397281714676606 0.13531566004848877 1.180893371389818 3.8920415919722006e-14 0.21197182088542144 0.4809165531293108 28.23611634802929 0.9295121352922808 1.9577986400930791 6.83489328375345 4.0060677092509113e-07 6.397281714676606 -1.1808933713897791 HEERQDEHGYISR ddPTM_A549_PD325901_60min_R1 1 HEERQDEHGYISR 13 1 P04792 P04792 HSPB1 Heat shock protein beta-1 0 57.434 0.030931999999999998 7113400.0 0.0 118.93 0.0 0.0 110.37 143.03 112.46 149.29 128.17 0.0 0.0 False True 0.0 128.95264848487133 0.0 0.0 102.61799195582957 141.8652111014454 116.73972684047332 146.3122938342606 122.7834606231812 0.0 0.0 0.0 HEHPPNPPVS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 HEHPPNPPVSPGK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 HEHPPNPPVS(1)PGK;HEHPPNPPVS(1)PGK 73.983 0.0014219 26455000.0 1720.96 1846.69 1881.13 1162.03 2751.0 1840.63 1576.3600000000001 2053.83 2735.2 2562.45 2190.88 True False 2011.4159745676354 1940.678633149267 2147.9025203398182 1446.7274021655096 2346.331544227663 2035.4042448886912 1862.7642072656563 2344.966692090582 2115.6815672168686 1983.5907653011845 1646.824030788074 1.2213909543238137 1.1784371595674197 1.3042696002632153 0.8784954403860564 1.4247615412223766 1.2359573377822677 1.1311252279785144 1.4239327628516676 1.2847040896072102 1.204494668657436 1.0 10.68547069068423 -10.78070966357406 1.0716945871046717 1.0022626590178378 1.232218496238905 0.04030742719163083 0.15301253760911607 0.5245004245705125 1.0861148753272285 0.08821748589568357 0.023166159703675294 1.6568772560536783e-11 10.78070966357406 0.22995583722106705 HEHPPNPPVS(ph)PGK ddPTM_A549_PD325901_60min_R1 1 HEHPPNPPVSPGK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 HEHPPNPPVS(1)PGK 66.02199999999999 0.0061758 21572000.0 1627.6 1895.3 1808.3 1808.5 2275.5 2455.3 1506.9 1456.4 1880.3 2226.4 2078.0 True False 1792.8327538242067 2055.023582555928 1931.0221121912607 1920.2069375984963 2115.676730048837 2435.3048508521197 1564.24590410732 1427.350959476302 1801.2775299193856 2085.824724040199 1822.4191735273178 0.9837653048580223 1.127634965878021 1.0595927326937307 1.0536582173254405 1.1609166325625926 1.3363033522845094 0.8583348588676777 0.783217703265075 0.9883991323648049 1.14453620458956 1.0 10.831639115380487 -7.794684363751313 24.999991997913586 0.9658877486415173 1.116701197382075 0.32477207920314943 0.11821755831038512 176.5452200016341 132760.13860656813 0.017273080756179865 0.02386695241737069 1.604411019812804e-08 7.794684363751313 0.1508134487405578 HELLQPFNVLYEK ddPTM_A549_MK2206_60min_R1 2 HELLQPFNVLYEK 13 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 97.551 0.00017521 3418800.0 1206.77 1480.37 1449.4099999999999 1597.98 2041.82 1425.46 1716.17 1375.8400000000001 2206.48 2537.7 2356.5 False True 1410.44327330617 1555.7145098284936 1654.9581326148298 1989.485171736048 1741.4709827825995 1576.3012310562324 2027.9758745357033 1570.8695333332873 1706.7158030245255 1964.431807490806 1771.3160139086092 0.7962685721978358 0.8782817394597103 0.9343099252871188 1.1231678346011358 0.9831509279588383 0.8899040141222149 1.1448978378853727 0.8868375383040692 0.9635298216823908 1.1090239076854869 1.0 10.790605905576097 -5.6699324160959 2.4058368607447433 0.9886817276546228 0.807685826674386 0.37550834310233194 0.08509600873751368 0.2283708737777196 2.4478845136695786 0.009906649472043085 0.059714824539361736 2.138294820112849e-06 5.6699324160959 -0.18099590098023677 HELLQPFNVLYEK ddPTM_A549_PD325901_60min_R1 2 HELLQPFNVLYEK 13 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 116.84 1.7426e-05 7774300.0 2127.66 2080.95 2608.7 2932.8999999999996 3121.0 3189.9 2894.4 2682.7 3252.8 2462.6000000000004 2329.8999999999996 False True 2343.658476899493 2256.3189595946606 2785.7420693874597 3114.0585719008186 2901.7917268654915 3163.9225120079764 3004.5479758764527 2629.1914439625616 3116.096127916703 2307.1110157300545 2043.3370704529812 1.1469759496801644 1.1042323815397055 1.3633296775504087 1.5240063017162766 1.4201238595559773 1.5484094904158794 1.4704123070651205 1.2867145034371172 1.5250034724940928 1.129089786061875 1.0 10.996711496447062 -10.907858498778051 1.1171568843747404 0.9963301601595663 1.3906447232667338 0.3947357499248111 0.14588593640806732 0.3663768199158993 0.7995806372274823 0.11376538469002638 0.02602059739977187 1.2363501937220968e-11 10.907858498778051 0.3943145631071675 HELQANCYEEVKDR ddPTM_A549_PD325901_60min_R1 1 HELQANCYEEVKDR 14 1 P23528;E9PP50;G3V1A4;E9PK25 P23528 CFL1 Cofilin-1 0 107.61 6.0323000000000005e-05 13334000.0 1361.4 1864.3 1588.7 1572.9 1743.8 1452.6 1437.1 1887.8 1562.4 1579.9 1361.2 False True 1499.6083257902899 2021.411103761418 1696.5187356291863 1670.0544606849173 1621.3215037834163 1440.7705072079946 1491.789626911295 1850.1463480495488 1496.7377613923563 1480.1448443725792 1193.7810293577402 1.256183746358481 1.6932846594563047 1.4211305875265259 1.3989621376236934 1.3581397793326426 1.2068968024924436 1.2496342212054459 1.5498205303571764 1.2537791475858922 1.2398796831014345 1.0 10.22132251755392 -12.600363018593091 0.14205907302410586 0.3013367595024871 1.5598048860305542 0.24554400391852493 0.1536124088305272 16.592455205383796 0.3073565715219619 3.950393478640409 0.3752268374134987 2.509787670142392e-13 12.600363018593091 1.258468126528067 HELS(ph)PPQK ddPTM_A549_MK2206_60min_R1 2 HELSPPQK 8 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 HELS(1)PPQK;HELS(1)PPQK 64.711 0.0028565 17571700.0 2658.7799999999997 2876.05 2699.3599999999997 2534.77 3879.7 3033.05 2787.87 2664.1 3802.8 3890.1 3085.7 True False 3107.5170630699945 3022.428660397223 3082.16983797212 3155.788763790149 3309.001269407513 3354.0053378243565 3294.3898922262097 3041.744333464073 2941.471871823747 3011.323708208215 2319.435529012434 1.3397729853664477 1.3030880240435518 1.3288447984085343 1.3605848165712182 1.426640761520289 1.446043787754006 1.4203412213957465 1.3114157713877836 1.2681843642690782 1.2983002418223593 1.0 11.179558030282166 -9.936671208514824 0.6125838513713823 1.00332003401701 1.3741219844584986 0.3050169103208088 0.0958239595077491 0.19679167084285185 0.14881200837798855 0.03398751117749282 0.01337973922841684 1.1569878319176118e-10 9.936671208514824 0.37080195044148856 HELS(ph)PPQK ddPTM_A549_PD325901_60min_R1 2 HELSPPQK 8 0 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 HELS(1)PPQK;HELS(1)PPQK 59.426 0.0038571999999999994 19263500.0 1946.15 2447.25 2720.4 2927.5 2956.8 2755.5 2431.33 2595.3 2988.3 3239.5 2713.6 True False 2143.721715320092 2653.4883461246227 2905.022703094128 3108.325026165108 2749.1245684062405 2733.0601215831143 2523.8555936248245 2543.534705526535 2862.712143093177 3034.957417143472 2379.844402927685 0.9007823001717611 1.1149839640189505 1.2206775785510886 1.3061043076350898 1.1551698779232233 1.1484196690426076 1.0605128597987232 1.0687819348178722 1.2028988700149756 1.2752755656671784 1.0 11.216651536152112 -7.689128736531512 9.165395757805117 1.0934029416876745 1.1517721735747726 0.0 0.11615602358976415 0.8398395776281515 98.59203777592973 0.01795033707356043 0.026624097664626912 2.0458381055525044e-08 7.689128736531512 0.05836923188709808 HELS(ph)PPQKR ddPTM_A549_MK2206_60min_R1 4 HELSPPQKR 9 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR 95.48299999999999 0.00020236 220672000.0 16235.5 18182.300000000003 17526.7 17083.899999999998 27623.300000000003 21891.8 20366.8 22783.8 29591.3 27486.2 18774.6 True False 18975.655480134854 19107.70140711756 20012.249607012753 21269.456266925412 23559.94916236425 24208.37574539926 24067.18392787065 26013.473422461153 22888.917797595997 21277.04833000505 14112.348667400214 1.344613566979745 1.353970331760347 1.4180665514055373 1.507152123874196 1.6694562838280893 1.7154037443335746 1.7053989024141878 1.8433128344222927 1.621907050133322 1.507690096911751 1.0 13.784670490010129 -10.60680569893121 0.9360802500998681 1.0070508883387679 1.5782082555067072 0.12135100655707154 0.2094373108378035 0.2977735768331075 0.4740196020452715 0.11048530788662633 0.031700537335608875 2.4728302288181783e-11 10.60680569893121 0.5711573671679393 HELS(ph)PPQKR ddPTM_A549_PD325901_60min_R1 5 HELSPPQKR 9 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR 104.43 0.00013436 255860500.0 27710.260000000002 30775.54 34383.11 32082.269999999997 45562.8 35630.43 35608.1 36291.7 40027.770000000004 36805.45 32879.83 True False 30523.385195984778 33369.10276256702 36716.55460703673 34063.91895377832 42362.62611112687 35340.267591311414 36963.18573099996 35567.83357321211 38345.542027219766 34481.547605742606 28835.81935241516 1.0585232492597187 1.1572101473777672 1.273296734117649 1.1813057412195667 1.469097360938307 1.2255683516186082 1.2818496772800765 1.2334601329867572 1.3297885369089786 1.1957887231962627 1.0 14.815574395836348 -10.870306496670445 1.0689515898513267 0.9971423422833586 1.2542495266418332 0.12342030250236602 0.11343234011669129 0.3742501428836469 0.7452917722905092 0.07325875068992836 0.01693162935697594 1.348011208578565e-11 10.870306496670445 0.25710718435847457 HERPAGPGT(ph)PPPDSGPLAK ddPTM_A549_MK2206_60min_R1 4 HERPAGPGTPPPDSGPLAK 19 1 H0YME5;Q9P2K8-2;Q9P2K8 H0YME5 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 1 HERPAGPGT(0.999)PPPDS(0.001)GPLAK;HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(0.998)PPPDS(0.002)GPLAK;HERPAGPGT(1)PPPDSGPLAK 142.41 8.1584e-21 101660000.0 11152.6 13337.300000000001 12408.5 12188.300000000001 17874.2 12751.0 12253.2 13720.6 18597.1 19214.1 15240.300000000001 True False 13034.886225108672 14016.11160178575 14168.211885216142 15174.434047153576 15244.928857809567 14100.30235657123 14479.447832010163 15665.537067575224 14384.886543466244 14873.621465227996 11455.712899117922 1.1378502883144308 1.2235040913835207 1.2367813343425427 1.3246171740496389 1.330770855734645 1.2308533288798587 1.2639499575033053 1.3674868779909328 1.2556954482137785 1.2983584344517964 1.0 13.483779621170589 -10.460698308319593 0.7957574199763466 0.9994506363606628 1.266776920493828 0.0 0.10472728678562161 0.27074836195677043 0.3093468241544288 0.04223583852128611 0.012292374041644022 3.461797752875781e-11 10.460698308319593 0.26732628413316517 HERPAGPGT(ph)PPPDSGPLAK ddPTM_A549_PD325901_60min_R1 4 HERPAGPGTPPPDSGPLAK 19 1 H0YME5;Q9P2K8-2;Q9P2K8 H0YME5 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 1 HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(0.976)PPPDS(0.024)GPLAK;HERPAGPGT(0.998)PPPDS(0.002)GPLAK;HERPAGPGT(0.998)PPPDS(0.002)GPLAK 115.36 3.6671e-14 127647000.0 13587.599999999999 15679.7 17710.699999999997 17904.600000000002 20880.199999999997 19094.199999999997 18343.300000000003 18404.5 19891.1 18382.0 16772.9 True False 14967.003149337548 17001.083346911935 18912.654605090844 19010.526477703086 19413.646784779485 18938.70316586183 19041.36431933891 18037.407809449054 19055.146240163536 17221.357382908263 14709.939632173404 1.0174754977649194 1.1557548006334009 1.2857057933620144 1.2923592450456758 1.3197638651295474 1.287476606935852 1.2944556398920812 1.226205427111193 1.295392552018796 1.170729303690813 1.0 13.844503705507062 -10.77982455691756 0.9319064960075708 0.9937380212187938 1.249086582772276 0.21315774387441233 0.09672389834239994 0.3836900107172826 0.5677691406523171 0.06805376878588608 0.015559404531068062 1.6602574705545735e-11 10.77982455691756 0.25534856155348207 HES(ph)EEGDSHRR ddPTM_A549_PD325901_60min_R1 1 HESEEGDSHRR 11 1 H0Y8P7;Q6UN15;Q6UN15-5;Q6UN15-3 H0Y8P7;Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 HES(0.997)EEGDS(0.003)HRR 50.088 0.0059838 4715100.0 213.02 235.52 184.46 213.22 225.24 237.92 129.27 101.52 280.08 323.69 261.65 True False 234.6456335829644 255.36809695751182 196.9785648480894 226.3901151422457 209.41991943581638 235.98245840212456 134.18944058925825 99.4951039591007 268.30921160443626 303.2521581587188 229.46870873600702 1.0225604827580792 1.1128667536596497 0.8584114406409286 0.986583819594753 0.9126295283978966 1.0283862218164626 0.5847831773160711 0.4335889825987784 1.169262742107088 1.3215403521863027 1.0 7.842153625203627 HEYALPLAPPEPEYAT(ph)PIVER ddPTM_A549_MK2206_60min_R1 2 HEYALPLAPPEPEYATPIVER 21 0 Q8N8Z6 Q8N8Z6 DCBLD1 Discoidin, CUB and LCCL domain-containing protein 1 1 HEYALPLAPPEPEYAT(1)PIVER;HEYALPLAPPEPEYAT(1)PIVER 107.23 5.8216e-10 17246700.0 1815.66 2122.5299999999997 2171.5299999999997 1834.3400000000001 2899.38 2402.05 2369.21 2787.73 3567.7999999999997 2863.4700000000003 3697.4 True False 2122.0990193749267 2230.557710941368 2479.485607051891 2283.753382346653 2472.8850427854622 2656.2333366482544 2799.664789449026 3182.89926456507 2759.69899660586 2216.6101382337165 2779.2335369512803 0.7635554879288026 0.8025801651012783 0.8921472679736723 0.8217205758289203 0.8897723094900937 0.9557431217392575 1.0073513982276416 1.1452435436773682 0.9929712490563679 0.797561668986356 1.0 11.44047135289808 -7.1796626050096695 1.605627804907042 1.010487023608216 0.8202502036562883 0.46172823340512814 0.08149694287307528 0.14793893028768676 0.745433520420289 0.008242236363026643 0.016458873861943446 6.612069274098619e-08 7.1796626050096695 -0.19023681995192765 HEYALPLAPPEPEYAT(ph)PIVER ddPTM_A549_PD325901_60min_R1 2 HEYALPLAPPEPEYATPIVER 21 0 Q8N8Z6 Q8N8Z6 DCBLD1 Discoidin, CUB and LCCL domain-containing protein 1 1 HEYALPLAPPEPEY(0.001)AT(0.999)PIVER;HEYALPLAPPEPEY(0.001)AT(0.999)PIVER 93.949 1.5296000000000001e-06 20093000.0 2515.0 2826.1000000000004 2853.3999999999996 3043.7 3828.4 3526.2 3431.0 3293.3 4295.3 3352.1000000000004 3825.3999999999996 True False 2770.3209485548564 3064.265365198812 3047.0488828880966 3231.702436255761 3559.506391263007 3497.483796307882 3561.5685825152414 3227.612547956128 4114.783478308109 3140.4478339270345 3354.9000512085668 0.8257536457924813 0.9133700910389099 0.9082383487968382 0.9632783054420875 1.0609873131632441 1.0425001469262702 1.061601993547386 0.9620592264122488 1.226499572416711 0.936077911708792 1.0 11.712054071125205 -6.331199685132216 0.6735660012036983 1.096408510250723 0.8193997119420791 0.3553472118548995 0.0813348749799511 0.7400092284366214 0.4715410672380112 0.015926130008874433 0.11969061431419674 4.6644486338078525e-07 6.331199685132216 -0.277008798308644 HFAESETLDQLPLT(ph)NPEHFGTPVIAK ddPTM_A549_MK2206_60min_R1 1 HFAESETLDQLPLTNPEHFGTPVIAK 26 0 P29374;P29374-3;P29374-2;C9J1W3 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 HFAESET(0.002)LDQLPLT(0.499)NPEHFGT(0.499)PVIAK 51.645 0.0037348 821530.0 410.08 539.21 486.33 377.8 601.72 528.98 491.25 382.24 796.29 769.16 823.54 True False 479.2914785065872 566.6534858478773 555.2989068894037 470.3610169600865 513.2077850936639 584.9563124914945 580.5037661570029 436.42369056090524 615.9315864138348 595.4062217951803 619.0322894522795 0.7742592537954116 0.91538599117221 0.8970435247904965 0.7598327663590254 0.8290484904232552 0.94495282791963 0.9377600749560792 0.7050095738092328 0.994991047977177 0.9618338686694298 1.0 9.273870853847095 -8.93175139789421 24.999912932225993 0.9977905579553547 0.8523089454467113 0.41196632518014875 0.07388209137570895 32.102210315353545 11758.922156972982 0.012188110074265707 0.012975178589993364 1.1701690362792868e-09 8.93175139789421 -0.14548161250864333 HFAESETLDQLPLTNPEHFGT(ph)PVIAK ddPTM_A549_PD325901_60min_R1 1 HFAESETLDQLPLTNPEHFGTPVIAK 26 0 P29374;P29374-3;P29374-2;C9J1W3 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 HFAESET(0.001)LDQLPLT(0.329)NPEHFGT(0.67)PVIAK 54.732 0.0024418000000000005 2075300.0 1676.3 777.48 1067.4 1233.9 1166.8 1418.9 837.85 1177.8 1145.0 1192.8 1260.0 True False 1846.4767419731625 843.0009681662972 1139.8401827976293 1310.1152006097793 1084.8479932414784 1407.344948834795 869.7348402391121 1154.307855033775 1096.8796318447576 1117.486404435478 1105.0279877980854 1.6709773529379215 0.7628774813623392 1.031503450938751 1.1855945868125544 0.9817380240324788 1.2735830805870503 0.7870704179829635 1.0445960353763404 0.9926261089824843 1.011274299633096 1.0 10.109867194863554 -7.748641844375433 24.99973383502204 0.9865196504363429 1.12184247542148 0.13874935956360823 0.21935229150923363 436.97619663955345 853622.6545899555 0.030126839284519643 0.04452309113815124 1.7838492726143663e-08 7.748641844375433 0.13532282498513704 HFAESETLDQLPLTNPEHFGT(ph)PVIGK ddPTM_A549_MK2206_60min_R1 1 HFAESETLDQLPLTNPEHFGTPVIGK 26 0 Q4LE39-2;Q4LE39;Q4LE39-3;X6RCR8 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 HFAESETLDQLPLT(0.065)NPEHFGT(0.935)PVIGK 90.946 7.364000000000001e-09 1762300.0 546.33 606.28 479.24 780.41 681.38 530.26 571.77 713.49 741.9 950.19 975.74 True False 638.5371475139087 637.1370623687449 547.2034382778727 971.6104850339367 581.1499046186278 586.371761241899 675.6532078892411 814.6293924714844 573.8608345708525 735.5414190643846 733.4368289459738 0.8706096044175393 0.8687006668104983 0.7460812120169392 1.3247364281259826 0.7923653158429494 0.7994850246129269 0.9212152720231218 1.1107015087341507 0.7824270774560791 1.0028694906437072 1.0 9.518528901425178 HFAESETLDQLPLTNPEHFGT(ph)PVIGK ddPTM_A549_PD325901_60min_R1 1 HFAESETLDQLPLTNPEHFGTPVIGK 26 0 Q4LE39-2;Q4LE39;Q4LE39-3;X6RCR8 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 HFAESET(0.001)LDQLPLT(0.083)NPEHFGT(0.916)PVIGK 54.324 0.0048233 1373600.0 1528.9 1201.0 1337.5 1931.5 2168.2 1885.7 1707.7 2367.0 2343.7 1769.2 1940.0 True False 1684.112802483307 1302.2124849098673 1428.270793040874 2050.804368245228 2015.913111883934 1870.3434844018427 1772.6874579892954 2319.7883281244212 2245.2024394362943 1657.4924100664387 1701.3922986732423 0.9898439083076783 0.7653804980340758 0.8394717633050588 1.2053683150232075 1.1848608421796416 1.0993017223954462 1.0419040096582366 1.363464692965525 1.3196265442056596 0.9741976682032492 1.0 10.732500113550765 -6.258376144036286 24.81904253510918 1.1629912124044355 0.8549468797150324 0.4989281959928161 0.12590933882890812 158.29253069919423 1282514.034490105 0.019773003025939376 0.04997658695564553 5.515994900017728e-07 6.258376144036286 -0.3080443326894031 HFAS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 HFASPSK 7 0 A0A1X7SBT5;Q92664 A0A1X7SBT5 GTF3A Transcription factor IIIA 1 HFAS(0.995)PS(0.005)K;HFAS(0.997)PS(0.003)K 80.165 0.0049159 14720600.0 2102.16 3738.2 3191.5 3195.6000000000004 4334.1 3733.6000000000004 2670.3999999999996 3582.0 5211.9 4569.6 3552.3 True False 2456.9532151224325 3928.458412856833 3644.102690225837 3978.5221434559357 3696.559631347551 4128.687073836898 3155.577113782518 4089.75946941493 4031.4129716940633 3537.3241862749683 2670.1658715075578 0.9201500331270631 1.471241339265134 1.364747684445686 1.4899906353794001 1.3843932584085117 1.5462286885967382 1.1817906698061797 1.5316499671632307 1.5097987037853775 1.3247582197123278 1.0 11.3827136500088 -10.856246174718564 1.0850348327624129 0.9983497084651727 1.395264246496796 0.06730926211154653 0.19909882487781239 0.3898386914030927 0.8093693475582917 0.11768563091982231 0.02818405929939432 1.3923673321711767e-11 10.856246174718564 0.39691453803162324 HFAS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 HFASPSK 7 0 A0A1X7SBT5;Q92664 A0A1X7SBT5 GTF3A Transcription factor IIIA 1 HFAS(0.967)PS(0.033)K 52.255 0.014685 9429000.0 1281.5 1490.6 1970.4 2112.2 2214.0 2226.7 1924.7 2161.7 2132.8 1790.8 1707.8 True False 1411.596936609562 1616.2180932611552 2104.123192977749 2242.6657968457525 2058.496277885355 2208.566493460033 1997.9455117362518 2118.5831976791555 2043.1658330117887 1677.7285823801603 1497.7514266361663 0.942477444191056 1.0790963470427506 1.4048547412860402 1.4973551398195668 1.3743911314500152 1.474588142052585 1.3339633507967892 1.4145092169515265 1.364155491142199 1.1201649035636099 1.0 10.548582492359715 -10.661042644998199 0.9086673517902132 0.9981841998893594 1.3304707652451337 0.2653204243478514 0.16251076278060225 0.5395906192514115 0.7867020927022164 0.11779183346079293 0.030725660353919035 2.1825155919583898e-11 10.661042644998199 0.3322865653557744 HFCSSSVS(ph)EDLGCRR ddPTM_A549_PD325901_60min_R1 2 HFCSSSVSEDLGCRR 15 1 A0A0C4DFW0;Q5VVW2-3;Q5VVW2-2;Q5VVW2 A0A0C4DFW0 GARNL3 GTPase-activating Rap/Ran-GAP domain-like protein 3 1 HFCSS(0.001)S(0.037)VS(0.962)EDLGCRR;HFCSS(0.001)S(0.038)VS(0.961)EDLGCRR 45.115 0.0379 12325000.0 6524.2 7197.0 6482.0 6922.9 7506.4 7912.5 6542.1 7685.8 8480.7 8669.3 9747.3 True False 7186.531981137811 7803.516447873697 6921.907499432486 7350.511809953349 6979.176359674181 7848.063223381009 6791.063195474481 7532.500689606543 8124.285671428676 8121.918918488006 8548.443893225614 0.8406830612566718 0.9128581231091368 0.8097271954861738 0.8598654798188954 0.8164265270788019 0.9180692207151718 0.7944209823797517 0.8811546035385253 0.9503818207038744 0.950104957105045 1.0 13.061446109123073 -8.835017561861099 1.9664662207192602 0.9812342691322459 0.851656360714022 0.6345173953622554 0.038577491148665176 0.11954410253597675 0.9062199197980514 0.006852565200780981 0.007209129342421001 1.4621180486001258e-09 8.835017561861099 -0.12957790841822392 HFDETVNR ddPTM_A549_MK2206_60min_R1 2 HFDETVNR 8 0 P04843;B7Z4L4 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 0 ; 62.107 0.011306 4064000.0 1021.26 894.0 612.12 491.74 836.26 524.28 699.9100000000001 847.9200000000001 1080.71 1292.4499999999998 1333.83 False True 1193.6237205902194 939.5007814172627 698.9278203794581 612.2163220750473 713.247261786923 579.7589616111019 827.074587218215 968.1152566460928 835.9309105392457 1000.4846473544908 1002.6031991647444 1.1905245480810471 0.9370614239012488 0.6971130961498285 0.610626739057961 0.7113953579852128 0.578253652186719 0.8249271375826848 0.9656016033587534 0.8337604659905821 0.9978869488826502 1.0 9.969535027337779 -10.033992396978157 0.5791561023647265 0.9996029597097525 0.7934112709999275 0.1547495837355758 0.16536995266775076 1.2679233170861712 0.8238005227979142 0.1227877439430959 0.042285772990523385 9.247143624053765e-11 10.033992396978157 -0.20619168870982507 HFDKS(ph)PTK ddPTM_A549_MK2206_60min_R1 3 HFDKSPTK 8 1 H3BPM0;H3BS25;Q9BY12-2;Q9BY12;H3BPB0 H3BPM0 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum 1 HFDKS(0.999)PT(0.001)K;HFDKS(0.816)PT(0.184)K;HFDKS(1)PTK 63.623999999999995 0.0041336 20012100.0 3868.4900000000002 4559.07 4383.2300000000005 3491.34 5454.78 5228.799999999999 4714.0599999999995 4641.8 6142.6 5273.2 4783.4 True False 4521.396536500066 4791.107189637584 5004.837924135545 4346.718456732211 4652.389087903373 5782.108145403468 5570.5436822189995 5299.789364916307 4751.3109077165645 4081.980457603548 3595.5497648760625 1.25749797170612 1.3325103260815894 1.3919534567499054 1.2089162272746463 1.2939298277418614 1.6081290827587185 1.5492884389019197 1.473985818994495 1.321442121071669 1.1352868753143937 1.0 11.811996662397839 -10.157285834066213 0.8339576022818681 1.0199153962289542 1.3864051737598264 0.49247166285668875 0.12109621224000808 0.32047168864240005 0.4389637168845427 0.06243931591005631 0.025650905035500465 6.961681751591443e-11 10.157285834066213 0.3664897775308722 HFDKS(ph)PTK ddPTM_A549_PD325901_60min_R1 5 HFDKSPTK 8 1 H3BPM0;H3BS25;Q9BY12-2;Q9BY12;H3BPB0 H3BPM0 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum 1 HFDKS(0.999)PT(0.001)K;HFDKS(0.989)PT(0.011)K;HFDKS(0.979)PT(0.021)K;HFDKS(0.982)PT(0.018)K;HFDKS(0.999)PT(0.001)K 76.22800000000001 0.0019783 21560100.0 4772.34 5172.95 5025.81 4999.34 7401.0 5838.73 5231.24 5350.599999999999 6187.490000000001 5940.91 5326.939999999999 True False 5256.824443588981 5608.892650969604 5366.891689250658 5308.13787747507 6881.179292063916 5791.181318704761 5430.3177008443645 5243.878085535504 5927.451312876086 5565.799928717959 4671.760150254863 1.1252342317492905 1.2005951655423954 1.1487943551549564 1.1362179792525287 1.4729307735733224 1.2396144349124663 1.162370825169207 1.1224630368169544 1.2687833112649674 1.191371078503318 1.0 12.189750492330282 -10.876993736568236 0.9401544550301169 0.9898049337976408 1.2137628966017013 0.03614154314747553 0.11036131691341165 0.5287233291416082 0.764656360272923 0.08572219379483083 0.017182796062180393 1.3274136016629671e-11 10.876993736568236 0.22395796280406055 HFELGGDK ddPTM_A549_MK2206_60min_R1 2 HFELGGDK 8 0 H0Y5B4;H7BZ11;J3KQN4;P83881;R4GN19;Q969Q0 H0Y5B4 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a;60S ribosomal protein L36a-like 0 ; 51.066 0.032232 3764900.0 1209.67 1442.73 1243.31 1244.49 1889.27 1380.39 1505.74 1267.1100000000001 1891.01 1926.49 1677.25 False True 1413.8327224079767 1516.158794601932 1419.630053512357 1549.3901058672786 1611.3608857008353 1526.4619535712764 1779.3134673857423 1446.7267228616286 1462.6992543224535 1491.2945709945875 1260.7425352549196 1.121428589003783 1.2025919267452714 1.1260269355672297 1.2289504498664314 1.2781046412263875 1.2107642209934868 1.4113218342601321 1.1475195628020143 1.1601887089711767 1.1828700383247168 1.0 10.300057967912833 -9.895070996255814 0.7468595214768613 1.0128593882695642 1.218602597583416 0.12672390713763748 0.09193073311239129 0.3651256510665068 0.4190392009614505 0.03582950975758276 0.01691570466058089 1.2732949122176478e-10 9.895070996255814 0.20574320931385182 HFELGGDK ddPTM_A549_PD325901_60min_R1 2 HFELGGDK 8 0 H0Y5B4;H7BZ11;J3KQN4;P83881;R4GN19;Q969Q0 H0Y5B4 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a;60S ribosomal protein L36a-like 0 ; 58.981 0.014485 6283300.0 1164.58 1429.3 1511.38 1660.2199999999998 2447.5 1988.27 2119.92 1704.06 1409.07 1850.4099999999999 1414.3600000000001 False True 1282.8073042815167 1549.7521271287856 1613.951335466255 1762.7680187668093 2275.596043416624 1972.0781883288184 2200.5947156647353 1670.0711864907903 1349.8516880729176 1733.5747968070534 1240.402686366746 1.0341861706531592 1.2493943653638422 1.3011511126226818 1.4211256055322805 1.8345623307879597 1.589869330342405 1.7740970249834596 1.3463943643838625 1.0882366693567538 1.3975903276095396 1.0 10.276592840204287 -8.71489984768818 3.4634942272083036 1.0385419796288822 1.4671925788592142 0.1762890357978537 0.24162190023991714 0.1714205067715778 4.178103842250046 0.04065648724356567 0.04505931632920054 1.92796946946555e-09 8.71489984768818 0.428650599230332 HFFHHADEDDEEEDDS(ph)PPER ddPTM_A549_MK2206_60min_R1 3 HFFHHADEDDEEEDDSPPER 20 0 A0A087WZV0;O43314;O43314-2;D6RFG4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 HFFHHADEDDEEEDDS(1)PPER;HFFHHADEDDEEEDDS(1)PPER;HFFHHADEDDEEEDDS(1)PPER 190.88 1.1791e-44 86955200.0 4118.68 5829.200000000001 4665.27 4508.599999999999 6180.1 5445.79 4961.4 4653.19 7013.5 6875.299999999999 7224.889999999999 True False 4813.812491941843 6125.881381473722 5326.875437139245 5613.207202398744 5271.015476728964 6022.0598831771595 5862.822158598179 5312.79393229672 5424.953448258086 5322.164954896774 5430.750416180001 0.8863991388003958 1.127999063117078 0.9808728129484136 1.033596975046974 0.9705869489094668 1.1088817238287092 1.0795602282017773 0.9782798923088328 0.9989325659480421 0.9800054406920056 1.0 12.406935846761742 -8.31654838945586 24.99992708710959 0.9978906493130616 1.0302167184287752 0.06583439281028447 0.06437094983148975 696.5943714373389 316005.0483960941 0.009552413326805129 0.011548317621977788 4.824492221674334e-09 8.31654838945586 0.03232606911571356 HFFHHADEDDEEEDDS(ph)PPER ddPTM_A549_PD325901_60min_R1 3 HFFHHADEDDEEEDDSPPER 20 0 A0A087WZV0;O43314;O43314-2;D6RFG4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 HFFHHADEDDEEEDDS(1)PPER;HFFHHADEDDEEEDDS(1)PPER;HFFHHADEDDEEEDDS(1)PPER 170.55 4.899099999999999e-56 198427000.0 14391.3 15652.4 17189.0 20261.7 20820.2 22600.0 17497.1 18085.9 21107.0 19513.8 26878.0 True False 15852.294181684883 16971.48268010257 18355.54890585389 21513.21919134059 19357.86097779074 22415.95309300613 18162.961715280504 17725.16253638593 20219.946191569692 18281.695337754063 23572.176393680107 0.6725002357412789 0.7199794536007614 0.7786955518784919 0.9126530716573316 0.821216533191256 0.9509496585566036 0.7705254454209048 0.7519527361562673 0.8577886850104696 0.7755624696010477 1.0 14.524797346767752 -14.999999999999998 0.04049691782570062 1.9245120152568322 0.2755797543189194 0.03644195951650819 0.09455887185225942 324.98949200062333 1.0114647880554144 36.770288184177716 11.303877972354453 1.000000000000004e-15 14.999999999999998 -1.648932260937913 HFKDEDEDEDVAS(ph)PDGLGR ddPTM_A549_MK2206_60min_R1 4 HFKDEDEDEDVASPDGLGR 19 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR 209.64 1.2157999999999998e-66 284159000.0 35774.3 42823.0 45201.8 41214.9 61828.0 49144.1 44257.7 47370.3 68794.5 63711.8 55301.899999999994 True False 41812.127242338596 45002.50778817834 51612.09493437263 51312.552350207145 52733.183103056326 54344.49604278657 52298.75120905199 54085.18509045952 53212.65559224229 49319.26013023316 41568.91197520584 1.0058508932655688 1.0826000886196037 1.241603219375988 1.2343972914377213 1.2685726086482494 1.3073350602777587 1.258121724240607 1.3010969621413022 1.280107009391573 1.1864457785099136 1.0 15.343217366902708 -10.797080463989582 1.0501016124504756 1.0003263190115668 1.2270527789483134 0.09312064084640292 0.1038080529511158 0.3980505680361554 0.7810119930435163 0.06605026541995636 0.016628974614178022 1.595583497824882e-11 10.797080463989582 0.22672645993674667 HFKDEDEDEDVAS(ph)PDGLGR ddPTM_A549_PD325901_60min_R1 4 HFKDEDEDEDVASPDGLGR 19 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR 217.89 3.49e-67 507738000.0 31085.0 36272.5 38986.2 40016.3 46268.2 42609.9 46185.1 46478.3 46755.600000000006 40996.2 37908.6 True False 34240.72631643249 39329.31087334981 41632.03797506553 42488.01596738881 43018.48124862475 42262.89910166732 47942.69925395643 45551.25384497902 44790.624728978815 38407.69293554472 33246.082522414654 1.029917623928992 1.1829757941205197 1.2522389050498515 1.2779856375181409 1.293941360448152 1.2712144076876872 1.4420555932156294 1.3701239481153356 1.3472451889265684 1.1552546953359117 1.0 15.020896733442937 -10.790469856349656 1.0568551553697423 1.0012661611768179 1.2821718623114597 0.2895651153510159 0.1098615317696004 0.35498825388724753 0.7088810143420454 0.07292303059712606 0.018643099778198297 1.6200564353967702e-11 10.790469856349656 0.28090570113464186 HFLPLDFSTQVNSSLT(ph)SPTGR ddPTM_A549_MK2206_60min_R1 1 HFLPLDFSTQVNSSLTSPTGR 21 0 P19793 P19793 RXRA Retinoic acid receptor RXR-alpha 1 HFLPLDFSTQVNS(0.001)S(0.01)LT(0.51)S(0.378)PT(0.101)GR 78.098 0.0001859 2969700.0 1213.8 1380.8 1079.9 1562.8 2146.2 1376.6 888.82 1335.9 2088.4 1649.4 2143.2 True False 1418.6597654391715 1451.0768221263484 1233.0460583346019 1945.6860701567587 1830.4968230539487 1522.2708982868742 1050.3070889275675 1525.2679160221667 1615.3807344895122 1276.7993944419493 1610.98429068913 0.8806167593554324 0.9007392750587419 0.7653991820163202 1.2077622863252462 1.136259883869456 0.9449321803353483 0.6519660650932096 0.9467925446806832 1.002729042006053 0.7925585629986333 1.0 10.653726710515762 -7.499846538684635 0.011813773392162767 1.9035926525348967 7.368779972981171e-05 0.0 0.15989813885941603 4104.4154162733275 19.07356022189325 1489.5022217274168 1582.5443906308183 3.163395272893412e-08 7.499846538684635 -1.903518964735167 HFLPLDFSTQVNSSLTS(ph)PTGR ddPTM_A549_MK2206_60min_R1 1 HFLPLDFSTQVNSSLTSPTGR 21 0 P19793 P19793 RXRA Retinoic acid receptor RXR-alpha 1 HFLPLDFS(0.324)T(0.055)QVNS(0.007)S(0.016)LT(0.133)S(0.36)PT(0.105)GR 59.358999999999995 0.00082422 2296800.0 845.39 1621.3 1081.0 999.44 1703.7 1099.7 1470.1 982.88 1455.3 1400.7 1507.5 True False 988.0711641988971 1703.8172448677929 1234.3020548751774 1244.302844866566 1453.0879868777438 1216.0695240782188 1737.1981407173755 1122.206249943759 1125.6768736365575 1084.2808971716013 1133.1461451165844 0.8719715179344663 1.5036165036704021 1.089269958861472 1.0980956430280624 1.2823482594367754 1.0731797741350502 1.533075100863219 0.9903455567316078 0.993408377628767 0.9568764822123137 1.0 10.146118226348193 HFLPLDFSTQVNSSLTS(ph)PTGR ddPTM_A549_PD325901_60min_R1 2 HFLPLDFSTQVNSSLTSPTGR 21 0 P19793 P19793 RXRA Retinoic acid receptor RXR-alpha 1 HFLPLDFSTQVNSSLT(0.061)S(0.612)PT(0.327)GR;HFLPLDFS(0.014)T(0.025)QVNS(0.01)S(0.011)LT(0.202)S(0.534)PT(0.202)GR 134.69 3.2558999999999998e-18 10946300.0 5526.700000000001 5987.9 5220.8 6374.8 7251.6 7065.2 6797.0 6695.7 6920.3 6613.5 7252.9 True False 6087.766515458495 6492.521347536874 5575.114883220778 6768.55691777876 6742.2726326619 7007.6633536595955 7055.663554461118 6562.1490108249645 6629.463856991501 6195.922481333031 6360.839279921214 0.9570696959244501 1.0207019957305525 0.876474728864684 1.064098088304881 1.0599658843676067 1.101688479345825 1.109234684915433 1.0316482970319985 1.04223099582444 0.9740731071277396 1.0 12.635001418897454 -6.291743161883576 24.997472434446657 1.038617886684854 0.9583440821739633 0.424620078303786 0.04897247924378445 554.9166795857218 457747.6121480921 0.00694713175857748 0.016145381717862204 5.10806997644079e-07 6.291743161883576 -0.08027380451089083 HFNYPST(ph)PPSER ddPTM_A549_MK2206_60min_R1 2 HFNYPSTPPSER 12 0 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 1 HFNY(0.096)PS(0.174)T(0.609)PPS(0.121)ER;HFNY(0.006)PS(0.124)T(0.726)PPS(0.144)ER 53.995 0.019174 10459900.0 1778.28 2223.8 1602.99 1994.77 2611.5 1869.65 1457.77 2135.89 3464.0 3208.6 2914.7 True False 2078.4101892281847 2336.981921382223 1830.318085979983 2483.4887395486276 2227.3518094331303 2067.495122026772 1722.62793931948 2438.6589483887906 2679.4095308713204 2483.775031530521 2190.899548372343 0.9486560854751518 1.066676892200926 0.8354185326934582 1.1335475154000805 1.0166380339472287 0.9436740828956535 0.7862651396314587 1.1130856958734199 1.2229723324658586 1.1336781886580607 1.0 11.097307623674249 HFNYPST(ph)PPSER ddPTM_A549_PD325901_60min_R1 2 HFNYPSTPPSER 12 0 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 1 HFNY(0.001)PS(0.025)T(0.964)PPS(0.01)ER;HFNYPS(0.006)T(0.983)PPS(0.011)ER 89.992 5.6674e-06 7142100.0 1586.8 1441.6 1435.1 1352.4 1976.4 1674.7 1819.7 1656.2 1827.0 1668.0 1918.8 True False 1747.8907678595795 1563.0886912956398 1532.4945159573522 1435.9346764767529 1837.5844822098547 1661.0617984450157 1888.949679278048 1623.1657917362356 1750.2175435636427 1562.6821953373383 1682.7997642753683 1.0386801834454975 0.9288619623551723 0.9106814420177084 0.8533009731523714 1.0919804727932907 0.9870822623749813 1.1225041263845494 0.9645626450602626 1.0400628647088652 0.9286204030401954 1.0 10.7166478057904 -6.765381371766167 24.999938044134126 1.0248782493810156 0.9310083668842659 0.28410267790238775 0.06554982953784488 78.51027358183092 497913.2717485856 0.007959782545105484 0.015448135377113401 1.7164004836381694e-07 6.765381371766167 -0.09386988249674966 HFRHDT(ph)PDS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 HFRHDTPDSSPR 12 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HFRHDT(1)PDS(0.613)S(0.388)PR;HFRHDT(1)PDS(0.531)S(0.47)PR 69.594 0.016439 13509800.0 752.51 798.05 995.1500000000001 676.09 1086.23 945.6800000000001 952.78 738.5699999999999 865.97 1333.42 1270.22 True False 879.5152908968789 838.667336252848 1136.2772339584023 841.7320803508336 926.44700592018 1045.7512299084215 1125.8877930159174 843.2645592757633 669.8291776699306 1032.1994958995904 954.789317711434 0.9211616370038765 0.8783794714661004 1.1900816367342513 0.8815893357169191 0.9703156379470305 1.0952690928874413 1.1792002404411006 0.8831943797789987 0.7015465770767798 1.0810756642875974 1.0 9.899038615252907 -8.494758165004983 24.148772665797992 0.8555534896134042 1.0152150545642002 0.05238328367675915 0.13710085837792002 549.7191989320385 472076.38850913494 0.023561199075318756 0.02844691801218829 3.2006768965765013e-09 8.494758165004983 0.1596615649507961 HFRHDT(ph)PDS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 HFRHDTPDSSPR 12 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HFRHDT(0.997)PDS(0.546)S(0.457)PR;HFRHDT(0.953)PDS(0.634)S(0.413)PR 65.092 0.003239 41369000.0 1927.62 1576.87 1921.2400000000002 2002.75 1830.07 1784.4 1784.4 1769.0900000000001 1927.7799999999997 1883.75 2136.62 True False 2123.310563361158 1709.758368925746 2051.6268997546545 2126.4553189247385 1701.532196598759 1769.8684380159334 1852.3063184611456 1733.8041121257422 1846.7621106355334 1764.8097035172148 1873.8292851501149 1.1331398117150555 0.9124408410496024 1.0948846386453481 1.1348180625506583 0.9080508080875932 0.9445195739238044 0.988513912734988 0.9252732497383532 0.9855551545014876 0.9418198965632206 1.0 10.871773807197036 -6.763404525422618 24.999970175488386 0.978795621632179 1.0595125310145612 0.3866576087884501 0.06394207604239738 52.35333329592994 666036.2479889579 0.008783698329215555 0.017213387946465403 1.7242311014656998e-07 6.763404525422618 0.08071690938238218 HFS(ph)GLEEAVYR ddPTM_A549_MK2206_60min_R1 2 HFSGLEEAVYR 11 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 1 HFS(1)GLEEAVYR;HFS(1)GLEEAVYR 69.03 0.0011627 3617400.0 441.12 358.78 346.65 129.32 296.28 498.77 298.59000000000003 280.55 489.15000000000003 513.56 560.5699999999999 True False 515.5702716514479 377.04036952671754 395.81018253698454 161.00340580539543 252.69760447974267 551.5495103432696 352.83993798843676 320.3188216483413 378.35830601204 397.5464393170898 421.3649980550602 1.2235716635962197 0.8948070467814445 0.9393523058725054 0.38209962039693895 0.5997119021421955 1.30895900914674 0.8373736300287828 0.76019323656894 0.8979348255276759 0.9434728588090793 1.0 8.718926667124828 HFS(ph)GLEEAVYR ddPTM_A549_PD325901_60min_R1 2 HFSGLEEAVYR 11 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 1 HFS(1)GLEEAVYR;HFS(1)GLEEAVYR 71.176 0.00081464 5432500.0 134.95 248.64999999999998 349.19 247.884 291.53 300.58 184.32 121.01 424.03 339.3 134.65 True False 148.65002465506066 269.6046081372508 372.8881332500509 263.1952316945896 271.0539385239014 298.1321761369815 191.33439846377414 118.59636061949146 406.2094937040455 317.8765400946997 118.08890361667633 1.2587975677849255 2.2830647070143315 3.157689857638683 2.2287888500424824 2.295337921027354 2.524641748768677 1.62025721811134 1.0042972454419796 3.439861674240163 2.6918408957927666 1.0 6.883729596090585 -7.725159100969384 24.983428569477688 2.040805498278465 2.32772002086917 0.03895904571648823 0.7745230781684571 783.3009660872843 539397.383021766 0.15286733015513135 0.22673483771986622 1.8829591532357437e-08 7.725159100969384 0.28691452259070527 HFS(ph)PIK ddPTM_A549_MK2206_60min_R1 2 HFSPIK 6 0 Q9H9E1 Q9H9E1 ANKRA2 Ankyrin repeat family A protein 2 1 HFS(1)PIK;HFS(1)PIK 58.917 0.020863999999999997 9353500.0 1156.52 1597.74 1533.52 1474.8600000000001 2666.5 2094.7 1923.27 2596.2 3212.4 2636.5 2261.8 True False 1351.7123018007176 1679.0581415006902 1750.9961953674206 1836.2007662089816 2274.261382291192 2316.359763650674 2272.7032637898815 2964.2193005290455 2484.7965291486807 2040.9128188712261 1700.1326374956484 0.7950628509736949 0.9876042047954555 1.0299174057070606 1.080033831309636 1.3376964432853042 1.3624582650579242 1.336779974495195 1.7435223788747674 1.4615309854935015 1.2004432912231826 1.0 10.731431588667784 -6.214621762151459 1.3140126880891845 1.2893956359874743 0.8701788451365114 0.4922755026462271 0.18212471064149188 0.47892090628588996 1.4751882775618883 0.03581326437955133 0.1655062621998986 6.100679892968474e-07 6.214621762151459 -0.41921679085096286 HFS(ph)PIK ddPTM_A549_PD325901_60min_R1 2 HFSPIK 6 0 Q9H9E1 Q9H9E1 ANKRA2 Ankyrin repeat family A protein 2 1 HFS(1)PIK;HFS(1)PIK 77.67399999999999 0.013673 12871200.0 1543.56 1865.92 1827.48 1803.3 2571.7 1729.5700000000002 2352.8 2197.4 2287.8 2070.25 1938.17 True False 1700.2610748911866 2023.1676268468093 1951.5037823299704 1914.6857454085527 2391.072663883363 1715.484955357107 2442.3370915015603 2153.5711331730477 2191.651722038808 1939.534061688925 1699.7873770719166 1.0002786806312716 1.1902474710289668 1.148086995263881 1.1264266173730646 1.4066892695733901 1.0092350246253925 1.4368485873267118 1.2669650111667654 1.2893681595719257 1.141045102376275 1.0 10.731138578537715 -4.2007552848850995 12.811985846255283 1.1698155708759441 1.1712866298153024 0.0 0.1471278812980561 0.0 0.0 0.020588003542003287 0.0 6.298609953040433e-05 4.2007552848850995 0.001471058939358283 HFS(ph)QSEETGNEVFGALNEEQPLPR ddPTM_A549_MK2206_60min_R1 4 HFSQSEETGNEVFGALNEEQPLPR 24 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 HFS(0.946)QS(0.054)EETGNEVFGALNEEQPLPR;HFS(0.959)QS(0.041)EETGNEVFGALNEEQPLPR;HFS(0.957)QS(0.042)EETGNEVFGALNEEQPLPR;HFS(0.913)QS(0.087)EETGNEVFGALNEEQPLPR 205.59 2.1446999999999996e-62 79667900.0 3107.34 4213.450000000001 3597.2700000000004 3692.3399999999997 5370.400000000001 4293.83 3706.26 4409.599999999999 5402.4 5148.030000000001 4941.0 True False 3631.7830248309074 4427.896607899963 4107.416977743603 4596.963465755442 4580.421274125863 4748.200240586325 4379.639467393496 5034.674303833634 4178.765025860055 3985.0864475378894 3714.013335337341 0.9778594466196324 1.1922134381614387 1.1059241329758256 1.2377347765602202 1.2332807829592318 1.2784553559377703 1.1792201782699567 1.3555886447500705 1.1251346316128672 1.0729865748249736 1.0 11.858763280008256 -9.636521270633137 1.1888275303036233 1.025828425875763 1.1951107134151142 0.27113277254239687 0.09478634847120257 0.3155126635466611 0.9148450210750432 0.025452476161467338 0.01806960910920798 2.3092913529643694e-10 9.636521270633137 0.16928228753935115 HFS(ph)QSEETGNEVFGALNEEQPLPR ddPTM_A549_PD325901_60min_R1 2 HFSQSEETGNEVFGALNEEQPLPR 24 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 HFS(0.994)QS(0.006)EETGNEVFGALNEEQPLPR;HFS(0.935)QS(0.065)EETGNEVFGALNEEQPLPR 228.25 7.464399999999999e-89 119125000.0 1376.23 1371.0500000000002 1639.47 1783.44 1519.67 1679.19 1885.8000000000002 1504.2199999999998 1528.17 1846.6100000000001 2143.7 True False 1515.943856473022 1486.5931952003937 1750.734293133998 1893.599038313885 1412.933621776891 1665.5152333736694 1957.565150949355 1474.217152062238 1463.9463292543255 1730.0147294555666 1880.0384900339322 0.8063366066753564 0.7907248724325653 0.9312225799709024 1.0072129099227687 0.7515450504161696 0.8858942208909824 1.0412367413360901 0.7841420055371474 0.7786789137641024 0.9202017610949774 1.0 10.876546483167472 -11.044797118829289 1.3690520634418222 0.9994025579691309 0.8578296216544024 0.11390656163782176 0.0942094974980316 0.5154096824458422 1.7342620616363253 0.0662199492078664 0.015070755241951192 9.019924059984551e-12 11.044797118829289 -0.14157293631472856 HFVGMLPEK ddPTM_A549_PD325901_60min_R1 1 HFVGMLPEK 9 0 F6RFD5;P60981;P60981-2 F6RFD5 DSTN Destrin 0 71.223 0.0036735 2035400.0 950.66 1536.4 1177.8 1127.4 1268.7 1612.5 1356.0 1399.2 1600.5 1490.0 1248.8 False True 1047.1703033610975 1665.8778199962685 1257.7325906867604 1197.0369374888273 1179.5908887773944 1599.3683346226715 1407.6033220316717 1371.2918583488338 1533.2365508886755 1395.921145715009 1095.2055167954354 0.9561404570213555 1.5210641239925604 1.1483986990559345 1.0929792802645388 1.0770498054363988 1.4603362657471022 1.2852412633478238 1.2520863320349456 1.3999532757787014 1.2745746111647298 1.0 10.096985903566821 -11.018692119485458 1.3198160663674914 1.0006903057611196 1.264340571321032 0.0 0.1820873600960376 0.48157137870494543 1.5004900984521559 0.11217749742426034 0.02564651100246929 9.578728869376386e-12 11.018692119485458 0.26365026555991244 HGAEVIDTPVFELK ddPTM_A549_PD325901_60min_R1 1 HGAEVIDTPVFELK 14 0 E7ETE2;B4DDD8;B3KWE1;P12081-4;P12081 E7ETE2 HARS Histidine--tRNA ligase, cytoplasmic 0 48.111999999999995 0.0326 748850.0 435.12 342.45 288.6 311.44 396.85 469.85 319.49 449.51 419.58 416.68 340.43 False True 479.2930620815859 371.30946332837965 308.1861314927823 330.67694146844116 368.9766250581768 466.0236973782711 331.64836678163635 440.5441704162269 401.94651172875376 390.37075368894637 298.5592681635731 1.6053531515859467 1.2436708651260109 1.0322443961911605 1.1075755360147506 1.2358572129672551 1.5609084931268937 1.1108292461379379 1.4755668886985074 1.34628716837736 1.307515107771071 1.0 8.221873544708874 -10.743296416710407 1.0051659009067277 1.0006506891095195 1.2931871420685754 0.0 0.19844340983418082 0.582278505295942 1.0490336271823035 0.11992822003047039 0.031076368235525422 1.8059411058662928e-11 10.743296416710407 0.29253645295905595 HGANKENLELNGS(ph)ILSAR ddPTM_A549_MK2206_60min_R1 4 HGANKENLELNGSILSAR 18 1 O43663-3 O43663-3 PRC1 Protein regulator of cytokinesis 1 1 HGANKENLELNGS(1)ILSAR;HGANKENLELNGS(0.999)ILS(0.001)AR;HGANKENLELNGS(1)ILSAR;HGANKENLELNGS(0.993)ILS(0.007)AR 143.93 4.2838000000000006e-17 46239100.0 5015.03 5786.75 6118.129999999999 6287.87 8661.9 6794.889999999999 6281.06 6199.34 9902.4 9480.2 8001.19 True False 5861.444458288355 6081.27085779233 6985.772831631333 7828.398432273209 7387.745984349544 7513.920749717058 7422.247298642453 7078.115429682509 7659.522210883422 7338.616235715151 6014.273701389958 0.9745889111986569 1.0111396919609577 1.1615322445363356 1.3016365434888655 1.228368769223483 1.2493479882667324 1.2341053412529428 1.176886151364659 1.2735573056998106 1.2201999110913633 1.0 12.554174809150807 -5.734416311508767 4.586463510407395 1.1698025419144544 0.985725988151882 0.4611105472220145 0.0818318574541128 0.1973750605345749 9.661741314627257 0.016049990087813718 0.06336736106468267 1.8432476483364517e-06 5.734416311508767 -0.18407655376257248 HGANKENLELNGS(ph)ILSAR ddPTM_A549_PD325901_60min_R1 6 HGANKENLELNGSILSAR 18 1 O43663-3 O43663-3 PRC1 Protein regulator of cytokinesis 1 1 HGANKENLELNGS(1)ILSAR;HGANKENLELNGS(1)ILSAR;HGANKENLELNGS(1)ILSAR;HGANKENLELNGS(0.999)ILS(0.001)AR;HGANKENLELNGS(1)ILSAR;HGANKENLELNGS(0.995)ILS(0.005)AR 142.99 4.6848e-17 70964100.0 8755.97 10098.710000000001 11219.779999999999 12907.52 15117.83 12850.449999999999 12778.53 12874.369999999997 13498.57 12144.8 13143.509999999998 True False 9644.869628595565 10949.763733125825 11981.221740818044 13704.788195295178 14056.00577448219 12745.80019575311 13264.823951829927 12617.580590602116 12931.272045441634 11377.975255355468 11526.941593574602 0.8367240824723056 0.9499279270426328 1.0394102931428635 1.1889353376210876 1.2194046148648268 1.105739982482251 1.1507669960975653 1.0946165110817827 1.1218302739253785 0.9870766814414874 1.0 13.492722157665915 -5.60370003036836 2.223048999541252 1.0902715723089562 0.8403668065062507 0.6002052819194047 0.06836325427090376 0.22184128928760186 1.906243986687464 0.010960685049147927 0.08195602639917118 2.490576979796671e-06 5.60370003036836 -0.2499047658027055 HGANKENLELNGS(ph)ILSGGYPGSAPLQR ddPTM_A549_MK2206_60min_R1 2 HGANKENLELNGSILSGGYPGSAPLQR 27 1 O43663-2;O43663-4;O43663;G3V3N7 O43663-2 PRC1 Protein regulator of cytokinesis 1 1 HGANKENLELNGS(1)ILSGGYPGSAPLQR;HGANKENLELNGS(1)ILSGGYPGSAPLQR 127.0 1.059e-19 23811000.0 1439.56 1723.65 1706.1100000000001 1921.5 2839.8 1955.0700000000002 1754.17 1828.56 3123.9 2835.5 2469.2 True False 1682.522534137102 1811.3764226955989 1948.0620525838008 2392.2675862594124 2422.069181860313 2161.9542097295657 2072.879982655737 2087.7639797301404 2416.341637843221 2194.958580659725 1856.0294935468446 0.9065171323984872 0.9759416156874132 1.0495857201391146 1.2889167950062177 1.304973434032977 1.164827507992938 1.1168356913846742 1.124854958926571 1.301887521854854 1.1826097528575326 1.0 10.858003920696373 -5.9103234849453 3.138242858914928 1.1634915040022566 0.9371398923529044 0.5214863545408143 0.090102422965748 0.21526445445400144 4.193294108338805 0.01716848211887471 0.06334249021654369 1.2293527443284492e-06 5.9103234849453 -0.22635161164935225 HGANKENLELNGS(ph)ILSGGYPGSAPLQR ddPTM_A549_PD325901_60min_R1 3 HGANKENLELNGSILSGGYPGSAPLQR 27 1 O43663-2;O43663-4;O43663;G3V3N7 O43663-2 PRC1 Protein regulator of cytokinesis 1 1 HGANKENLELNGS(1)ILSGGYPGSAPLQR;HGANKENLELNGS(0.996)ILS(0.004)GGYPGSAPLQR;HGANKENLELNGS(1)ILSGGYPGSAPLQR 114.76 1.1547e-17 52350300.0 3855.2 3522.4700000000003 4921.4 4058.0 4923.8 5078.9 4900.1 6062.8 5078.6 5102.0 4436.3 True False 4246.577065951762 3819.320909009539 5255.39579878232 4308.653443613325 4577.969274187855 5037.539122303929 5086.575986937607 5941.872697825407 4865.1641033072365 4779.858849287235 3890.6632240227327 1.0914789642371139 0.9816631995869769 1.3507711914855813 1.1074341816607847 1.1766552411736335 1.2947764512743893 1.3073801802044347 1.5272133196051434 1.2504716607871609 1.2285460277759848 1.0 11.925800390632086 -4.147391645861481 16.25655243821094 1.1730367920012927 1.1575868936887348 0.0 0.15854758746673409 0.0 0.0 0.02333881555784041 0.0 7.122104705179967e-05 4.147391645861481 -0.015449898312557941 HGANTVPIKDYENKNS(ph)K ddPTM_A549_PD325901_60min_R1 1 HGANTVPIKDYENKNSK 17 2 P78504-2;P78504 P78504-2 JAG1 Protein jagged-1 1 HGANTVPIKDY(0.131)ENKNS(0.868)K 43.534 0.012903999999999999 2987700.0 1011.4 1271.9 1097.3 1313.8 2251.5 1648.8 1517.1 1789.7 1569.4 1609.4 1476.0 True False 1114.0765834466724 1379.0874767334387 1171.7693766009354 1394.9504421437132 2093.3624072533335 1635.3727194578978 1574.8340706889742 1754.00302950751 1503.4435757355116 1507.782209338078 1294.4613571348993 0.8606487766560431 1.0653755472359923 0.9052177341117972 1.07763003851365 1.617168713237361 1.2633615599600099 1.2165941161616742 1.3550060956549055 1.1614433814101364 1.1647950717318694 1.0 10.33813618253667 -6.517543855263077 24.99459795462831 1.1628172616145984 0.9618290875334367 0.3271187502737988 0.16707437795473581 311.3191624474936 1458563.879893547 0.02776421818611501 0.05917982442550767 3.0370793907414265e-07 6.517543855263077 -0.20098817408116176 HGAPAAPS(ph)PPPR ddPTM_A549_MK2206_60min_R1 2 HGAPAAPSPPPR 12 0 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR 98.943 7.6783e-05 64858000.0 3450.2 4896.2 4747.0 4457.4 6263.8 5293.8 4935.9 5239.200000000001 7773.5 7623.700000000001 5936.799999999999 True False 4032.50941070871 5145.395666638927 5420.195980104039 5549.4632001002865 5342.403317605684 5853.986402259963 5832.689138675527 5981.872644377076 6012.814661728699 5901.5008751104 4462.528712655477 0.9036377512312119 1.1530224224769419 1.2146019284386167 1.2435691863141016 1.1971695111910279 1.3118092407245228 1.3070367753902297 1.3404670377610852 1.3474007785488753 1.3224566731355878 1.0 12.123645736374671 -5.25723674939849 2.748635437234807 1.2081547581450438 0.8438734681318029 0.4529560438779697 0.10237779834657494 0.464455404156379 4.647655307923593 0.019557666117706925 0.3829493280568102 5.530485405575431e-06 5.25723674939849 -0.36428129001324094 HGAPAAPS(ph)PPPR ddPTM_A549_PD325901_60min_R1 3 HGAPAAPSPPPR 12 0 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR 81.128 0.00023374 107067500.0 6263.700000000001 5818.3 6941.0 6685.6 7024.0 7191.3 7137.4 7498.799999999999 7015.4 7152.199999999999 7502.2 True False 6899.586212907775 6308.628560325625 7412.057999623703 7098.554327900748 6530.658471484525 7132.736437067917 7409.017662735146 7349.230551305203 6720.567134710659 6700.608871397907 6579.476960364124 1.0486526899435993 0.9588343569450678 1.1265421315820674 1.0788934091058655 0.9925801869702272 1.084088671491172 1.126080037572639 1.1169931281131014 1.0214439803036754 1.0184105684636486 1.0 12.683757185236397 -8.962264227471376 14.985688016042436 1.0094570086919652 1.0657356924801265 0.18500576157351822 0.05019706840647905 2.992197380201435 1187.7083118842638 0.00892207507338552 0.009435568929892686 1.0907764993028271e-09 8.962264227471376 0.056278683788161254 HGAPS(ph)PSHPISAPQAAAAAALR ddPTM_A549_PD325901_60min_R1 1 HGAPSPSHPISAPQAAAAAALR 22 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;H0YF36;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 HGAPS(0.465)PS(0.465)HPIS(0.071)APQAAAAAALR 88.23899999999999 2.6239e-06 4523200.0 1814.5 2019.4 1677.0 1958.7 2390.6 2137.6 1876.0 1894.9 1905.2 1639.2 2374.5 True False 1998.7067042357007 2189.5819250849163 1790.8113046202213 2079.684450469545 2222.6925031222827 2120.1920943190216 1947.3922065865888 1857.1047329797075 1825.1310695114673 1535.7006322523778 2082.4515531956754 0.9597854515119634 1.0514443525588106 0.8599534053371323 0.9986712282828938 1.0673441596811206 1.0181231304351022 0.9351440630626782 0.8917877249676437 0.8764338679143192 0.7374484318234112 1.0 11.024067217334611 -7.778550771296635 23.757926038100535 0.9351907291236945 0.9928808262377143 0.19497955359018238 0.08369241970641 205.32338940742306 285075.8554326632 0.01066629846457295 0.014761088709550679 1.665134153513524e-08 7.778550771296635 0.057690097114019845 HGDLPDIQIK ddPTM_A549_PD325901_60min_R1 2 HGDLPDIQIK 10 0 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 ; 67.334 0.0049812 4635300.0 2624.1 2576.0 2384.5 2913.0 3977.8 4089.2000000000003 3077.5 3745.5 4014.2 3009.1000000000004 3800.9 False True 2890.496700239681 2793.088560472788 2546.326509163337 3092.929394096995 3698.413050665025 4055.898910969939 3194.615946572617 3670.7930642120923 3845.497133756529 2819.1049124637807 3333.4133958902717 0.8671281827220537 0.837906442662154 0.7638796053026831 0.9278565322591652 1.1094972664430873 1.2167404486855462 0.9583617653037644 1.1012114695218338 1.1536214315624937 0.8457111607997447 1.0 11.70278453016831 -6.581593833403555 3.896551975583886 1.0804386487096702 0.82591495766703 0.5067182198115121 0.09907980756948731 0.0970929540636355 3.014240893286573 0.011375853399638973 0.025114288371215956 2.620632765130062e-07 6.581593833403555 -0.25452369104264017 HGENEHNLQGR ddPTM_A549_MK2206_60min_R1 2 HGENEHNLQGR 11 0 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;F2Z2I2 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 0 ; 64.439 0.0060981 13093400.0 261.21000000000004 551.53 475.59 441.46 404.16 344.15 411.99 456.12 644.6 722.12 553.4300000000001 False True 305.29586202864226 579.6005212249028 543.0358133932335 549.6177198178926 344.70859938751465 380.56772457171854 486.84325011506127 520.7764068089157 498.5991292146807 558.9925904658792 415.9980571090354 0.7338877112799171 1.3932769908898546 1.3053806480901444 1.3212026124291123 0.8286303108794679 0.9148305336242704 1.1703017401051392 1.2518722092791343 1.1985611968471168 1.3437384644307704 1.0 8.700432980146608 -10.951358242877552 1.2560031424169735 1.0011327045735157 1.1394932535422433 0.0 0.2270033798088873 1.1780580256590363 3.3474384534721047 0.13657071321181327 0.03296582719669968 1.118514857021359e-11 10.951358242877552 0.13836054896872763 HGENEHNLQGR ddPTM_A549_PD325901_60min_R1 1 HGENEHNLQGR 11 0 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;F2Z2I2 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 0 71.555 0.0024075 6351700.0 438.52 270.44 408.71 277.82 531.01 485.15 378.34 335.75 512.75 531.02 528.78 False True 483.03822757863844 293.2309279092625 436.4475183728865 294.9803104250009 493.7136894850508 481.1990992509699 392.73793573559203 329.05320285922056 491.2009006361565 497.4913065755598 463.7434122125965 1.041606661912421 0.6323128699774068 0.9411400935929704 0.6360851769680156 1.0646268528742244 1.0376408302062758 0.8468862853744367 0.7095587650275252 1.0592083632898541 1.0727727736377892 1.0 8.857182977199328 -8.79447433052233 24.99730184943995 1.0279595445568688 0.8629420680379872 0.22506341244978922 0.1481513396147679 207.705159068746 157168.04026512156 0.02446004615926186 0.026040511113515786 1.6051871317350785e-09 8.79447433052233 -0.16501747651888155 HGERDVEVER ddPTM_A549_MK2206_60min_R1 2 HGERDVEVER 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 69.979 0.011904999999999999 5500400.0 323.1 324.1 277.587 195.837 184.64300000000003 192.305 0.0 221.719 170.95 386.78 499.40999999999997 False True 377.6313809634178 340.59530565697395 316.9530106444365 243.81707379145698 157.48225929510312 212.6545874582723 0.0 253.14834723596002 132.23009795105438 299.4061293696236 375.3927139851897 1.005963533374056 0.9073039858477685 0.8443238209917447 0.6494986841994921 0.4195133614162694 0.5664856549844015 0.0 0.6743560484925859 0.35224471073850205 0.7975810883251081 1.0 8.552256838879465 -3.7756204644868347 14.96090699873685 0.6559409697018137 0.9854562153209333 0.0 0.29331904101801354 0.0 0.0 0.04382380208898139 0.0 0.00016764072698530487 3.7756204644868347 0.3295152456191196 HGERDVEVER ddPTM_A549_PD325901_60min_R1 1 HGERDVEVER 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 73.781 0.0059240000000000004 2636600.0 182.76 0.0 150.3 147.27 224.27 250.68 248.25 228.55 245.86 0.0 142.82 False True 201.313660659199 0.0 160.50026182732213 156.36653342556292 208.51804888949812 248.63854519268907 257.6972895976124 223.99139095599352 235.5273592011808 0.0 125.2540454105734 1.6072427840498713 0.0 1.2813978287185397 1.2483950750892325 1.664760991998235 1.9850739700875168 2.057396938780699 1.788296659175889 1.880397223332306 0.0 1.0 6.96871338959858 -5.987426539224138 24.528363319894854 1.5362800798712548 0.7628904573278796 0.11621323751190316 0.6534508628239083 182.8633284880937 356723.8716180135 0.07001676441169345 0.21748236681575142 1.02937463086627e-06 5.987426539224138 -0.7733896225433752 HGES(ph)AWNLENR ddPTM_A549_MK2206_60min_R1 2 HGESAWNLENR 11 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 1 HGES(1)AWNLENR;HGES(1)AWNLENR 96.059 8.6994e-05 15947100.0 969.74 1057.77 864.44 662.26 1565.16 1086.9 913.72 1315.48 1430.8899999999999 1382.15 1194.73 True False 1133.4084041332856 1111.6059748990358 987.0305904868628 824.5137297299813 1334.927037354914 1201.915036574171 1079.731096616747 1501.95331848854 1106.7956996617972 1069.921355055135 898.0455681294437 1.2620834001709775 1.2378057576904713 1.0990874244196402 0.9181201477864611 1.4864802909004486 1.3383675386068246 1.2023121486649497 1.6724689389837837 1.232449375555812 1.191388714587941 1.0 9.810644841028951 -10.19505793919113 1.0711216291530152 1.0244029873078382 1.2675067964519835 0.0880502822432514 0.19161053531699052 0.5327988243724812 1.2166167666280407 0.0732257481266163 0.03493924782232034 6.381783411910431e-11 10.19505793919113 0.2431038091441453 HGES(ph)AWNLENR ddPTM_A549_PD325901_60min_R1 4 HGESAWNLENR 11 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 1 HGES(1)AWNLENR;HGES(1)AWNLENR;HGES(1)AWNLENR;HGES(1)AWNLENR 106.55 7.7173e-05 73586000.0 18165.81 18698.25 16303.68 20940.440000000002 20523.62 20733.600000000002 17115.41 17112.010000000002 23787.4 21271.4 21782.540000000005 True False 20009.989658237486 20274.017149014093 17410.14576679225 22233.883419610196 19082.11173384527 20564.752435803166 17766.746293461718 16770.697536437856 22787.69830091177 19928.320173800163 19103.425670897854 1.0474555717365757 1.0612765217235105 0.9113624994136448 1.1638689208229955 0.9988842871734229 1.076495534888881 0.9300293360749202 0.8778895379997905 1.192859264798069 1.0431804492614616 1.0 14.221543748452687 -8.77612350312712 24.999589065625095 1.0910724083279015 1.0114567663197291 0.10547839921827662 0.08884789200004542 383.8678349330912 653529.1875232549 0.01737884301911853 0.018538369972864607 1.67446662942145e-09 8.77612350312712 -0.0796156420081724 HGETFTFRDPHLLDPTVEY(ph)VK ddPTM_A549_MK2206_60min_R1 1 HGETFTFRDPHLLDPTVEYVK 21 1 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 HGETFTFRDPHLLDPT(0.001)VEY(0.999)VK 106.71 2.3078999999999999e-10 3545800.0 756.25 999.98 953.15 696.69 1611.7 950.83 1114.7 1131.6 2006.5 1660.0 2003.0 True False 883.886511462658 1050.8747107400823 1088.321002409136 867.3790812756022 1374.6210650060807 1051.4461994901271 1317.22656108949 1292.0077653796575 1552.0309537220853 1285.00484707993 1505.5998200122833 0.5870660315670381 0.6979774417955953 0.7228487862068536 0.5761020091437881 0.9130055986556016 0.6983570172594394 0.8748849087128234 0.85813490955991 1.0308389607202684 0.8534836614615472 1.0 10.556122645373453 -7.832185527527989 0.6648446076217721 1.021381947811833 0.6542763258560302 0.576055148111599 0.09618611858794147 0.22384581322806382 0.2013980659968715 0.01731319194173409 0.03191313793659853 1.4716836752800449e-08 7.832185527527989 -0.36710562195580265 HGETFTFRDPHLLDPTVEY(ph)VK ddPTM_A549_PD325901_60min_R1 2 HGETFTFRDPHLLDPTVEYVK 21 1 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 HGETFTFRDPHLLDPTVEY(1)VK;HGETFTFRDPHLLDPTVEY(1)VK 119.31 3.2340000000000005e-15 11599400.0 1441.92 1658.9899999999998 1917.22 2314.2 2697.5 2339.7 2171.7799999999997 2647.8 2452.0 2268.39 2512.0 True False 1588.3026569145989 1798.7989095259115 2047.3340783804288 2457.1428780704678 2508.036905869805 2320.6462589250623 2254.4282763436154 2594.987551841082 2348.950967059689 2125.1634682741415 2203.0399248799927 0.7209595427559576 0.8165076307565776 0.9293222765774226 1.115341964673798 1.1384436920753611 1.0533836598769204 1.023326109928045 1.1779121760503002 1.0662316831083507 0.9646504560692002 1.0 11.105279925367903 -5.831970241024371 2.212306644026545 1.0552420169303194 0.7407758704462243 0.7818040541746429 0.061338880600216694 0.11061480871444508 1.0381960110194697 0.008758277106937542 0.04333049937076315 1.4724133925312107e-06 5.831970241024371 -0.3144661464840951 HGGS(ph)PQPLAT(ph)TPLSQEPVNPPSEAS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(0.999)PQPLAT(0.482)T(0.482)PLS(0.037)QEPVNPPS(0.263)EAS(0.591)PT(0.146)R 64.53 0.00020517 4578500.0 551.81 581.79 566.75 256.24 496.71 900.17 735.69 679.18 869.75 759.73 950.85 True False 644.942037540772 611.4006259739925 647.1236721558809 319.01881150305053 423.64461698775807 995.4253919155134 869.3553500743932 775.4558449015167 672.7530137053499 588.1064653445994 714.7277028750277 0.9023604863033301 0.8554315489865625 0.9054128859883194 0.4463501417669715 0.5927356884078042 1.3927337472877646 1.2163448353510968 1.0849668227245244 0.9412717752497454 0.8228398913025365 1.0 9.481249898050637 -7.227003977408618 24.98573535924136 1.0276321717550567 0.7396703877331786 0.4248268044384441 0.19005417332226837 556.3123452337805 403650.94960269803 0.028684233212547584 0.04968087334290964 5.929198944039442e-08 7.227003977408618 -0.2879617840218781 HGGS(ph)PQPLAT(ph)TPLSQEPVNPPSEAS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(0.999)PQPLAT(0.731)T(0.245)PLS(0.027)QEPVNPPS(0.298)EAS(0.548)PT(0.152)R 66.376 0.00016287 11844000.0 1303.1 1760.2 1490.9 1923.4 1874.6 1935.1 1952.3 1690.7 1412.2 2302.0 1911.2 True False 1435.3897527084823 1908.5382314224385 1592.0814395100097 2042.2040496416626 1742.9345630189184 1919.341187180361 2026.5958448395522 1656.9776621715082 1352.8501450577876 2156.651327138222 1676.1345160949995 0.8563690675928588 1.1386545728256257 0.9498530244572412 1.218401047190126 1.039853631246463 1.1450997331956243 1.2090890232133906 0.9885708135358239 0.8071250440027995 1.2866815320781735 1.0 10.710922220045244 -8.519802126895486 24.983482787838543 0.9083374034711388 1.084338651994914 0.0 0.15782706146275433 107.6121253701591 873861.2896214226 0.019192736759791044 0.021965958903706253 3.0213279832827747e-09 8.519802126895486 0.1760012485237753 HGGS(ph)PQPLATT(ph)PLSQEPVNPPS(ph)EASPTR ddPTM_A549_MK2206_60min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(0.998)PQPLAT(0.413)T(0.464)PLS(0.133)QEPVNPPS(0.484)EAS(0.406)PT(0.102)R 43.302 0.018526 5926500.0 661.86 570.75 471.84 482.73 847.1 551.91 796.56 781.31 936.05 560.75 798.89 True False 773.5657870765946 599.7987371296449 538.7540070049063 600.9988716705734 722.4927121465845 610.312749871792 941.2846411603512 892.0630851615235 724.0361695646936 434.076185542211 600.5035647576699 1.2881951623197492 0.9988262723664106 0.8971703727059767 1.0008248192716447 1.2031447514189906 1.0163349323631086 1.5674921789018883 1.485525045170233 1.20571502328529 0.7228536365431573 1.0 9.230028999973657 -6.759717168979572 24.917660732132408 1.1651867956878308 1.0322175993679055 0.06103744999918537 0.23326039133785004 97.05609337381327 1404201.288266213 0.03113417921427095 0.062266473716365865 1.7389329270860347e-07 6.759717168979572 -0.13296919631992532 HGGS(ph)PQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(0.929)PQPLAT(0.03)T(0.039)PLS(0.002)QEPVNPPS(0.09)EAS(0.702)PT(0.209)R;HGGS(0.979)PQPLAT(0.012)T(0.011)PLS(0.003)QEPVNPPS(0.215)EAS(0.592)PT(0.188)R 72.051 3.2898e-05 102683000.0 4606.9 5789.4 5477.2 4157.200000000001 7269.1 5597.1 5534.4 5544.5 7705.4 8731.7 7908.299999999999 True False 5384.432092108847 6084.055731473266 6253.949320039151 5175.7141866238035 6199.825019318547 6189.381406945715 6539.928841566043 6330.449854319112 5960.1392029953495 6759.202905570983 5944.450852023536 0.9057913381983713 1.0234849076769148 1.052065106722223 0.8706799526926783 1.0429600939854822 1.0412032265080975 1.1001737594213268 1.0649343416077162 1.0026391590009485 1.1370609453806988 1.0 12.537327824716218 -5.257695951513342 23.739170740884234 1.0125941495577555 0.9057912530312877 0.17372033691770106 0.06722834687412364 203.86364946835891 1292693.2695027273 0.007495777026868242 0.07589357705158634 5.524640826511792e-06 5.257695951513342 -0.1068028965264678 HGGS(ph)PQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(0.998)PQPLAT(0.001)TPLSQEPVNPPS(0.069)EAS(0.746)PT(0.185)R;HGGS(0.997)PQPLAT(0.003)TPLSQEPVNPPS(0.304)EAS(0.559)PT(0.137)R 123.36 3.1455000000000005e-21 153775000.0 3327.4 3761.0 3683.3 3769.6000000000004 4605.4 4394.799999999999 3897.1 4501.1 4604.4 4916.0 4944.0 True False 3665.1951984975854 4077.952669230646 3933.270887482208 4002.439630617247 4281.932591767489 4359.010205891295 4045.406273074948 4411.3220294553585 4410.893080232316 4605.602921030192 4335.9193425982 0.8453098198780841 0.9405047342940255 0.9071365439942168 0.9230890416469041 0.9875489494695349 1.0053254826643658 0.932998506990407 1.0173902420454102 1.01729131280131 1.0621975542262716 1.0 12.08212220438065 -5.259628530856973 0.3932232026284668 1.0098988875863304 0.7580311638132426 0.7167850184639306 0.03180520997825695 1.9790756437570158 0.2032439674607974 0.00681888547906324 0.23409149873022317 5.50011118851014e-06 5.259628530856973 -0.25186772377308775 HGGS(ph)PQPLATTPLSQEPVNPPSEASPTR ddPTM_A549_PD325901_60min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGS(0.697)PQPLAT(0.15)T(0.15)PLS(0.002)QEPVNPPSEASPTR 42.038000000000004 0.021277 5647000.0 1494.7 1611.6 1518.2 1912.7 1804.7 1871.7 1916.4 1968.8 1860.7 1564.1 2013.1 True False 1646.440843660016 1747.4151879106912 1621.2341816782473 2030.843134943126 1677.9440978770103 1856.457495760158 1989.329650694319 1929.530739506278 1782.5012497585492 1465.342459069024 1765.5014620923212 0.9325627188712692 0.9897557297062809 0.9182853803796341 1.1502925251256062 0.9504065184338362 1.0515185263908213 1.1267788180343594 1.092908038274612 1.009628872040741 0.8299865452008324 1.0 10.78586230052169 HGGSPQPLATTPLSQEPVNPPS(ph)EASPTR ddPTM_A549_PD325901_60min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGSPQPLATTPLS(0.007)QEPVNPPS(0.584)EAS(0.327)PT(0.081)R 57.507 0.0009429 6477400.0 1740.4 1454.8 1727.6 2075.5 1774.6 1975.7 1657.0 2093.3 1921.5 2048.0 2282.7 True False 1917.0841267852368 1577.4011016210436 1844.845324902739 2203.698921197499 1649.9582180376474 1959.6105542412463 1720.0580417451918 2051.547489337918 1840.7460371962447 1918.6889304861334 2001.9423712275297 0.9576120443515762 0.7879353193637785 0.9215276880180804 1.1007803985118005 0.8241786785430509 0.9788546275883422 0.8591945834537209 1.0247784945377683 0.9194800328181054 0.9584136676769832 1.0 10.967184729394981 HGGSPQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGSPQPLAT(0.012)T(0.032)PLS(0.051)QEPVNPPS(0.27)EAS(0.49)PT(0.145)R;HGGSPQPLATTPLSQEPVNPPS(0.171)EAS(0.657)PT(0.171)R 74.146 2.6855e-06 9071800.0 1638.99 2013.01 2007.46 1560.15 2296.1 2080.5299999999997 1665.21 1770.92 2942.7 2181.7 3234.7 True False 1915.611442541726 2115.4636107391084 2292.1480139497903 1942.3868200377951 1958.3467316252777 2300.6903036559593 1967.757102172627 2021.9533332150436 2276.1831485262805 1688.8524547435434 2431.4347168216354 0.7878523035345188 0.8700474646115263 0.9427141917863539 0.7988644756116988 0.8054284649621286 0.9462274630442947 0.8092987603405093 0.8315885757599675 0.9361481650232011 0.6945909108969236 1.0 11.247592140897522 -9.063616002429148 1.6833278784140735 0.9788658574651411 0.8515616702667881 0.0 0.10077685792550231 0.18881838615787058 1.0913661430482706 0.010862470302061916 0.010458220717974098 8.63741919683346e-10 9.063616002429148 -0.127304187198353 HGGSPQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGSPQPLATTPLSQEPVNPPS(0.3)EAS(0.528)PT(0.172)R 88.454 6.7828e-10 7047300.0 1847.2 2170.8 1619.4 2193.4 2498.8 2243.5 2001.0 2262.1 2086.5 1876.5 2554.5 True False 2034.7263841632312 2353.7409344232624 1729.3022222432835 2328.881336427172 2323.2929083920167 2225.2296798300545 2077.1491499892145 2216.98064091688 1998.811660999201 1758.0174697545074 2240.312694309689 0.9082332075032921 1.05063053938929 0.771902166441161 1.0395340535910205 1.0370395678661708 0.9932674512277037 0.9271692988506007 0.9895853585742421 0.8922020868230173 0.784719684095799 1.0 11.129484396875974 -8.780460288245816 0.0017965513185225373 1.9120839092435147 4.427795746410231e-05 0.0 0.09497941209603636 303632.3300535341 423.3794981188315 225448.56331035928 225138.41328394608 1.6578289212862983e-09 8.780460288245816 -1.9120396312860506 HGGVCAPAAVAT(ph)SPPGAIPK ddPTM_A549_PD325901_60min_R1 1 HGGVCAPAAVATSPPGAIPK 20 0 A0A494BZT8;Q9Y6A5;E7EMT0 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 HGGVCAPAAVAT(0.5)S(0.5)PPGAIPK 96.993 1.1451e-06 43030000.0 2237.2 2712.0 2394.5 2036.8 2879.9 3076.4 2269.5 2910.0 2874.0 2509.8 3051.9 True False 2464.318897060407 2940.549757764828 2557.005169298221 2162.608510091577 2677.625759115645 3051.34681837717 2355.867064418053 2851.957767149163 2753.2157746042185 2351.330799674852 2676.535647588075 0.9207121523978564 1.0986402368355026 0.955341346416377 0.807987934717172 1.0004072845166672 1.1400359345584847 0.880192672397624 1.0655407372284271 1.0286490213889894 0.8784978454494798 1.0 11.386151152056655 -6.981112618232111 24.996840179291446 1.0171833584167573 0.9506513814026579 0.04926433966566768 0.09488268062362963 400.54512718089705 530105.8442873239 0.01172276598692959 0.022151753858664226 1.0444493447435043e-07 6.981112618232111 -0.06653197701409941 HGGVCAPAAVATS(ph)PPGAIPK ddPTM_A549_PD325901_60min_R1 1 HGGVCAPAAVATSPPGAIPK 20 0 A0A494BZT8;Q9Y6A5;E7EMT0 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 HGGVCAPAAVAT(0.407)S(0.593)PPGAIPK 93.26899999999999 8.4951e-07 44650000.0 2133.5 2425.1 2468.5 2805.4 2715.9 2436.0 2629.1 2841.1 2658.8 2478.3 3160.5 True False 2350.091349400311 2629.47168788919 2636.027254296371 2978.683186474328 2525.1445533463584 2416.1620236532262 2729.151839198723 2784.4320317001675 2547.0598822260595 2321.8197150506758 2771.7785360601947 0.8478640406605971 0.9486586513606243 0.9510237632632872 1.0746468910565372 0.9110195928335596 0.8717009646403996 0.9846211750661503 1.0045651178387283 0.9189261873159786 0.8376642234739683 1.0 11.436596276014736 HGHFGWPGWEMGPPGNWS(ph)PRPPR ddPTM_A549_MK2206_60min_R1 2 HGHFGWPGWEMGPPGNWSPRPPR 23 1 E7EMC7;Q13501-2;Q13501;C9JRJ8;E9PFW8 E7EMC7 SQSTM1 Sequestosome-1 1 HGHFGWPGWEMGPPGNWS(1)PRPPR;HGHFGWPGWEMGPPGNWS(1)PRPPR 92.275 3.4628e-07 5728400.0 2077.58 2120.3 2184.29 2068.34 3408.2 2853.8999999999996 2545.6800000000003 2769.79 4169.2 3234.7 2923.4 True False 2428.224712045736 2228.2142134664678 2494.055166922575 2575.0833928513093 2906.8582948152384 3155.8978037344996 3008.197104184346 3162.4162146261256 3224.882856844318 2503.979023403284 2197.4390982645577 1.1050248054489622 1.0140049911855191 1.1349826117557806 1.1718565465067945 1.3228390707669437 1.4361707708882085 1.3689558479960102 1.4391371379182545 1.4675641565635158 1.1394987125608251 1.0 11.101607466481623 -6.361636329740477 2.240406614402178 1.2754803038033662 1.067767025455284 0.3346229811322483 0.1360355681180243 0.4432717809132672 4.297292108622374 0.028241647229746262 0.080949258983197 4.3487422747331043e-07 6.361636329740477 -0.20771327834808218 HGLAHDEMKS(ph)PR ddPTM_A549_MK2206_60min_R1 7 HGLAHDEMKSPR 12 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR 100.54 7.376e-05 481264800.0 5876.01 7781.500000000001 6106.66 6472.180000000001 12461.14 9964.44 9438.81 10565.150000000001 12830.6 10251.95 7607.410000000001 True False 6867.736833348349 8177.545112526208 6972.67621315824 8057.864390547206 10628.122813172344 11018.870426940053 11153.719599064396 12062.792366914893 9924.489586257963 7936.027374711499 5718.280143165073 1.2010144066756145 1.4300707394164025 1.2193659699398458 1.4091412433122192 1.8586222687735736 1.9269553346578607 1.9505374552864774 2.109514061029918 1.735572468956505 1.387834659376954 1.0 12.481365585158334 -10.64633134269949 1.0212511157688389 1.0165242120241071 1.6566682392198873 0.21326388558966614 0.3091734848356854 0.44660863793222644 0.8600321761349726 0.19393878865066727 0.05761774961167418 2.2577126029626614e-11 10.64633134269949 0.6401440271957801 HGLAHDEMKS(ph)PR ddPTM_A549_PD325901_60min_R1 12 HGLAHDEMKSPR 12 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR 103.67 5.8385e-05 652047600.0 12123.43 14550.910000000002 15539.769999999997 15628.19 17800.430000000004 15717.19 16214.280000000002 17638.949999999997 15968.789999999997 16213.099999999997 13701.53 True False 13354.191688802537 15777.166252123088 16594.392240428253 16593.507802105312 16550.189204949787 15589.19441565774 16831.323298194467 17287.127304761423 15297.677289263092 15189.402099055045 12016.328671154835 1.111337085915371 1.3129772565222966 1.380986879982989 1.3809132769427308 1.3773082992210817 1.2973342226465192 1.4007043048512824 1.438636357064627 1.273074140022911 1.2640634685298817 1.0 13.5527085587127 -10.130011802405031 0.7586231601760088 1.0112484219451818 1.3401498163832029 0.22026117514624433 0.11165473842891724 0.2706506726468957 0.3052770601390409 0.04597697635031882 0.017921013772938286 7.412900956964898e-11 10.130011802405031 0.328901394438021 HGLAHDEMKS(ph)PREPGYK ddPTM_A549_MK2206_60min_R1 6 HGLAHDEMKSPREPGYK 17 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 HGLAHDEMKS(0.999)PREPGY(0.001)K;HGLAHDEMKS(0.994)PREPGY(0.006)K;HGLAHDEMKS(0.995)PREPGY(0.005)K;HGLAHDEMKS(0.999)PREPGY(0.001)K;HGLAHDEMKS(1)PREPGYK;HGLAHDEMKS(1)PREPGYK 133.16 8.7598e-13 177967000.0 8783.0 10822.800000000001 9194.8 8438.2 12588.100000000002 9780.26 10623.2 9508.0 14239.800000000001 14943.800000000001 12572.900000000001 True False 10265.35567626648 11373.634292083612 10498.760901171407 10505.55937880519 10736.407165355236 10815.200621588836 12553.29793107192 10855.788117028798 11014.508036287949 11567.985201080153 9450.7019356128 1.0862003421760498 1.2034697919341508 1.1108974732987014 1.1116168354878913 1.136043358313688 1.1443806709038442 1.3282926513392301 1.148675324964091 1.1654698361380231 1.2240344981666238 1.0 13.206205771817928 -10.556812551711085 0.8467662804738048 0.9996047909758161 1.1611257169133042 0.0 0.08955785888811263 0.4238918557211435 0.5421669830004033 0.04219585328309382 0.011668826678513463 2.7745173713329092e-11 10.556812551711085 0.16152092593748812 HGLAHDEMKS(ph)PREPGYK ddPTM_A549_PD325901_60min_R1 10 HGLAHDEMKSPREPGYK 17 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 HGLAHDEMKS(0.999)PREPGY(0.001)K;HGLAHDEMKS(1)PREPGYK;HGLAHDEMKS(1)PREPGYK;HGLAHDEMKS(0.985)PREPGY(0.015)K;HGLAHDEMKS(0.999)PREPGY(0.001)K;HGLAHDEMKS(1)PREPGYK;HGLAHDEMKS(0.996)PREPGY(0.004)K;HGLAHDEMKS(0.962)PREPGY(0.038)K;HGLAHDEMKS(1)PREPGYK;HGLAHDEMKS(1)PREPGYK 87.486 1.9948e-06 203655200.0 17763.93 18885.62 20633.690000000002 21161.1 22900.600000000002 24614.199999999997 20697.300000000003 21934.799999999996 25633.000000000004 23386.43 22615.899999999998 True False 19567.3110964859 20477.177476489156 22034.016283857607 22468.17308665498 21292.1408587811 24413.75011601199 21484.947077497138 21497.293206482285 24555.734151158667 21909.80681864689 19834.28767400216 0.9865396437772656 1.0324130522383048 1.1109053496657078 1.132794555365111 1.0735016658394958 1.2308861561997193 1.083222520043338 1.0838449839900182 1.2380446706611579 1.104642988886625 1.0 14.275708965203142 -5.636099528551925 2.6533308670928375 1.117641270831755 0.9900063411525438 0.30468583483943035 0.0646099022430377 0.3689222960759884 4.839627082148525 0.012235371687173997 0.07203306491641759 2.3115349881544112e-06 5.636099528551925 -0.12763492967921108 HGLLLPAS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 HGLLLPASPVR 11 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 HGLLLPAS(1)PVR;HGLLLPAS(1)PVR 128.33 1.1314999999999999e-07 39875000.0 7541.8 9023.6 8329.9 9477.4 11442.8 10239.400000000001 10190.0 10839.8 12107.9 8534.400000000001 9649.8 True False 8307.437984020286 9784.050440326953 8895.217105757883 10062.797473262912 10639.097203516962 10156.013721262247 10577.786026181953 10623.591685341407 11599.047069356446 7995.536527510183 8462.935775122192 0.9816260225489349 1.1561059542822403 1.0510793585254934 1.1890433462633268 1.2571402508798253 1.2000579930095958 1.249895580831018 1.255308083108786 1.3705701399097492 0.9447710274505468 1.0 13.046942502793872 -6.285708494489297 9.042577722015189 1.1980208903438287 1.072248561667482 0.15771264396358287 0.11998674116444046 0.5095043396036558 182.36552502618667 0.01939734550576818 0.045827825799778864 5.179543746890213e-07 6.285708494489297 -0.1257723286763468 HGLQLGAQS(ph)PGR ddPTM_A549_MK2206_60min_R1 4 HGLQLGAQSPGR 12 0 Q8N1G0;A6PVV7 Q8N1G0 ZNF687 Zinc finger protein 687 1 HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR 156.31 2.7325e-14 204184000.0 14499.1 18128.3 16822.7 15040.2 22020.0 18294.8 16855.0 16925.6 23775.8 23444.2 23333.5 True False 16946.193611038965 19050.95303777019 19208.41182104408 18725.049675180242 18780.88716971761 20230.7435928946 19917.335325346125 19324.855632476087 18390.619262150787 18148.13893729596 17539.147978161065 0.9661925215603164 1.086196037657676 1.0951735993653458 1.0676145556497845 1.0707981478406308 1.1534621646436294 1.1355930943821368 1.1018126796431904 1.0485469011978195 1.034721809742023 1.0 14.098291045374417 -9.349237973217742 1.3226988193090001 1.0129240619621336 1.0869605823405624 0.2255425214854796 0.04638112302135582 0.3315804410111585 1.2023007572737174 0.011100608150638616 0.009254287003207304 4.4746804526825285e-10 9.349237973217742 0.07403652037842878 HGLQLGAQS(ph)PGR ddPTM_A549_PD325901_60min_R1 5 HGLQLGAQSPGR 12 0 Q8N1G0;A6PVV7 Q8N1G0 ZNF687 Zinc finger protein 687 1 HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR 161.87 4.5234e-14 232610700.0 24983.100000000002 28598.899999999998 30181.2 29168.699999999997 35346.7 35407.3 30133.8 33992.4 34335.6 32916.5 34630.4 True False 27519.36592041383 31009.029670848264 32229.477726299247 30970.384352075896 32864.06973149518 35118.95468805288 31280.558248848087 33314.394915478064 32892.594137265354 30838.146572434973 30371.080340192682 0.9061042811834082 1.0210051576535895 1.061189703009912 1.0197327195862078 1.082084317165475 1.156328793532475 1.02994552378342 1.096911750991954 1.0830235134486057 1.0153786505784643 1.0 14.890410607571363 -5.254056210900015 2.4256836067814125 1.053691871683078 0.8702824301694699 0.5154568757250543 0.04288839074913958 0.4022969493154918 2.8073700915671647 0.006651624074876781 0.15444066248801935 5.571136368353194e-06 5.254056210900015 -0.18340944151360816 HGLTSGS(ph)ASPPPPALPLYPDPVR ddPTM_A549_MK2206_60min_R1 1 HGLTSGSASPPPPALPLYPDPVR 23 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 HGLT(0.002)S(0.013)GS(0.521)AS(0.464)PPPPALPLYPDPVR 82.34200000000001 1.324e-05 1247400.0 632.51 821.87 787.96 757.28 925.25 791.12 617.76 732.34 1235.6 1057.4 1195.7 True False 739.262224615201 863.6996725094017 899.704576465722 942.8136339955905 789.1469506712633 874.8357932970458 729.9989955850391 836.1514376971887 955.7385728477495 818.5326056038066 898.7746903588062 0.8225222990203195 0.9609746266493085 1.00103461536789 1.0489988693597982 0.8780253373136513 0.9733649630785625 0.8122157904709255 0.9303237470598809 1.063379491100492 0.9107205781206794 1.0 9.81181568833799 -8.749591562139438 24.734321385649004 1.0299292029278697 0.9318998154242802 0.057883173522490505 0.07773763717966355 181.86699172673 379677.69102963986 0.011928194973942747 0.013469801309330532 1.7799526025661747e-09 8.749591562139438 -0.09802938750358947 HGLTSGSAS(ph)PPPPALPLYPDPVR ddPTM_A549_MK2206_60min_R1 1 HGLTSGSASPPPPALPLYPDPVR 23 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 HGLT(0.001)S(0.004)GS(0.124)AS(0.871)PPPPALPLYPDPVR 81.34100000000001 1.6125999999999998e-05 1468200.0 648.68 766.49 907.89 1000.9 1439.5 913.94 663.16 969.74 1392.7 1156.4 1067.1 True False 758.161325296657 805.5010670565073 1036.642453839616 1246.120544932109 1227.75145689412 1010.6525241757279 783.6475879179199 1107.2036147041963 1077.2556736848983 895.1684368453194 802.1096195382464 0.9452091170943825 1.0042281596375982 1.2923949901465888 1.5535539215319074 1.5306529519006449 1.2599930228458476 0.9769831564531608 1.3803644635774155 1.3430279944841532 1.116017580440744 1.0 9.64765560445639 -10.860773070035547 1.0735881319048166 0.9978801202287415 1.2659546548292546 0.11511734829367937 0.19970304089944285 0.7502397877801156 1.5156013584672663 0.15270152038995508 0.03594352613798969 1.3779292840782302e-11 10.860773070035547 0.2680745346005131 HGLYLPTR ddPTM_A549_PD325901_60min_R1 2 HGLYLPTR 8 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 ; 60.59 0.012073 3442100.0 489.37 468.44000000000005 311.09000000000003 445.13 443.78 644.63 469.94 604.59 563.09 496.49 369.09000000000003 False True 539.0504821448465 507.91708279032287 332.2024381361388 472.62466913642163 412.6104237578876 639.3803470063956 487.823823861035 592.5309781583203 539.4252854982223 465.1415366684865 323.69426985428186 1.6653074593736614 1.5691259626528853 1.0262845810822883 1.4600958779689985 1.274691776112173 1.9752600109177922 1.507051156885291 1.8305266213858566 1.6664653524483348 1.436977975785238 1.0 8.338488016471079 -10.769838534610361 1.0427863074705097 1.0031032175537322 1.550341160511845 0.11737614767352622 0.27243643925670824 0.42204849647754134 0.8221965986463481 0.1665846727416867 0.04320991238540827 1.6988751561172295e-11 10.769838534610361 0.5472379429581127 HGNRNS(ph)NSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAK ddPTM_A549_MK2206_60min_R1 1 HGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAK 52 1 P46109 P46109 CRKL Crk-like protein 1 HGNRNS(0.332)NS(0.332)Y(0.31)GIPEPAHAY(0.022)AQPQT(0.001)T(0.001)T(0.001)PLPAVSGSPGAAITPLPSTQNGPVFAK 67.2 0.00010043 18927000.0 338.23 649.04 750.85 440.9 684.39 601.71 483.19 619.0 724.91 788.0 912.75 True False 395.31495507043286 682.0733637260175 857.3318204468342 548.9205197927529 583.7171376059506 665.3825528172274 570.979368487333 706.7451456079954 560.7190424433979 609.9902527102315 686.0889843815339 0.5761861275571775 0.9941470847850207 1.2495927495755743 0.800071903628609 0.8507892575073697 0.9698196122723468 0.8322234892053179 1.0301071168561053 0.8172686855610295 0.8890832918125036 1.0 9.42225189299563 HGNRNS(ph)NSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAK ddPTM_A549_PD325901_60min_R1 1 HGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAK 52 1 P46109 P46109 CRKL Crk-like protein 1 HGNRNS(0.802)NS(0.198)YGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAK 155.48 2.3127e-54 39215000.0 1515.7 1656.3 1146.1 1950.4 2283.9 2232.9 2015.9 1629.5 1577.2 1969.6 1631.7 True False 1669.5727482006334 1795.8822137853551 1223.8812380591744 2070.8717783202133 2123.486743027264 2214.7160027156347 2092.6161776428066 1596.9983441819797 1510.9157688607431 1845.23911986596 1431.011244198521 1.1667083364783244 1.2549742156576769 0.8552561994330411 1.447138718661896 1.4839063995032296 1.5476580017762545 1.4623338468698313 1.1159928691380931 1.0558378035016596 1.2894651438601654 1.0 10.482819292775384 -8.463870984600602 4.97363081067976 1.02858543403504 1.3168300796436623 0.1579573423509799 0.19745141110910844 0.19208868706971527 9.83798320668887 0.03210410924136517 0.038525094100464875 3.4366002345470006e-09 8.463870984600602 0.2882446456086223 HGQEEAAQS(ph)PYR ddPTM_A549_MK2206_60min_R1 4 HGQEEAAQSPYR 12 0 J3KQ72;Q9NRD1 J3KQ72 FBXO6 F-box only protein 6 1 HGQEEAAQS(0.993)PY(0.007)R;HGQEEAAQS(1)PYR;HGQEEAAQS(0.998)PY(0.002)R;HGQEEAAQS(1)PYR 96.464 0.00025638 48966000.0 2872.17 2892.3799999999997 2375.78 2510.2599999999998 3861.0199999999995 2977.75 2902.99 2295.11 3104.48 3898.42 3702.91 True False 3356.92207818539 3039.589787646153 2712.701328336124 3125.2738126898544 3293.0690726622674 3292.853528529525 3430.4257060887903 2620.4488709795914 2401.3202368358557 3017.7642144297247 2783.3752518830183 1.206061624610032 1.0920517402710253 0.9746085535900767 1.1228359563000114 1.1831207705229216 1.183043330683433 1.232469715956563 0.9414644573011838 0.862736792393087 1.084210335055662 1.0 11.442619709154576 -8.283727330419874 22.153636773250685 0.9338413344699829 1.1360859530574974 0.46069600221904916 0.08468926975088534 100.69797591573692 100090.74784527459 0.013784208643429614 0.016675673213646713 5.203225758832897e-09 8.283727330419874 0.20224461858751452 HGQEEAAQS(ph)PYR ddPTM_A549_PD325901_60min_R1 2 HGQEEAAQSPYR 12 0 J3KQ72;Q9NRD1 J3KQ72 FBXO6 F-box only protein 6 1 HGQEEAAQS(1)PYR;HGQEEAAQS(1)PYR 111.12 7.1392e-05 20787800.0 757.04 1241.07 1200.19 1014.6899999999999 1500.28 1591.76 1539.48 1452.5500000000002 1599.31 1296.16 1156.56 True False 833.8941434966074 1345.6593244355438 1281.6421107287672 1077.3650967718104 1394.9055084850236 1578.7972343063454 1598.065753835779 1423.5777507465696 1532.0965624503385 1214.3202363959506 1014.3104520378998 0.8221291043794241 1.3266740195094264 1.2635599960088733 1.062165034982361 1.3752254111967908 1.5565226909910157 1.5755193596053638 1.4034931296294848 1.5104808980052702 1.1971879358594812 1.0 9.986283573162696 -5.259308375594948 23.97074115164942 1.298665953401499 0.8221288191701591 0.3817636333864658 0.181484354668687 116.31034105963366 1308149.3741478566 0.03179718887866425 0.28860903588533643 5.504167281373596e-06 5.259308375594948 -0.4765371342313399 HGRDDS(ph)FDSLDSFGSR ddPTM_A549_MK2206_60min_R1 1 HGRDDSFDSLDSFGSR 16 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 HGRDDS(0.992)FDS(0.007)LDSFGSR 51.348 0.0054132 2873300.0 341.15 530.82 487.86 354.23 677.77 459.13 368.37 413.57 1005.2 615.7 635.85 True False 398.727779683287 557.8364706844649 557.0458838958414 441.01636590198916 578.0709308364898 507.7148318541719 435.2980607414866 472.1948140050063 777.5238049745533 476.61294237777906 477.95089643275594 0.8342442344166311 1.1671418023230933 1.1654876851438514 0.9227231692493265 1.2094776579581539 1.0622740445588923 0.9107589586930082 0.987956749384276 1.6267859539080183 0.9972006453697172 1.0 8.900718596449634 HGS(ph)ASQVQK ddPTM_A549_MK2206_60min_R1 2 HGSASQVQK 9 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 HGS(0.986)AS(0.014)QVQK;HGS(1)ASQVQK 100.88 0.00023264 23469400.0 1946.4 2766.8 1983.17 2150.8900000000003 3185.7 2148.98 2394.63 2549.89 3750.29 3566.07 3581.15 True False 2274.9047350888163 2907.618302041703 2264.413326703798 2677.858146557123 2717.0877500712713 2376.383637222527 2829.7032744072167 2911.3447162106195 2900.8553029825084 2760.4923102568223 2691.8516202880614 0.845107775608142 1.0801554885594147 0.8412103065552616 0.9948015434337197 1.0093750077430008 0.882806325323468 1.051210717960897 1.0815398197539097 1.0776430918848643 1.0254994329744727 1.0 11.394383172851645 -7.786737832437179 24.987198927432562 1.0426674497704027 0.9493596140535921 0.35136279081888344 0.07051179322657476 206.6778087327953 204134.24393849858 0.010467418832542909 0.014465848871211962 1.6340380587410478e-08 7.786737832437179 -0.09330783571681056 HGS(ph)ASQVQK ddPTM_A549_PD325901_60min_R1 2 HGSASQVQK 9 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 HGS(0.911)AS(0.089)QVQK;HGS(0.999)AS(0.001)QVQK 96.113 0.00027683 20643000.0 3750.2 4570.200000000001 3591.0 4666.5 6055.3 4842.0 3457.7 5219.9 4877.3 5081.3 5843.7 True False 4130.917543248675 4955.346793118297 3834.7068544372196 4954.739106609556 5629.996617650946 4802.568357359986 3589.284665626039 5115.784999567666 4672.324042267626 4760.465850819916 5124.961946266404 0.8060386762984841 0.9669041146204658 0.7482410395712009 0.9667855407627256 1.0985440822155697 0.9370934667834392 0.7003534276465947 0.998209362958212 0.9116797531875276 0.92887828255739 1.0 12.323325577058402 -14.99999999995178 0.17324401758299293 1.3858615459359884 0.8832272953446224 0.0347478426332809 0.11070260259555624 98.33041064207107 1.0674497474901503 12.858900931804744 0.1374359050669191 1.0000000001110289e-15 14.99999999995178 -0.502634250591366 HGS(ph)FHEDEDPIGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 HGSFHEDEDPIGSPR 15 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 HGS(1)FHEDEDPIGS(1)PR;HGS(1)FHEDEDPIGS(1)PR 143.93 5.3292e-14 41948000.0 1208.1399999999999 1880.2600000000002 1410.24 1409.8300000000002 1878.28 1672.7399999999998 1529.99 1725.26 1950.6200000000001 2239.33 1729.3799999999999 True False 1412.0444958128858 1975.9572027602048 1610.2332376199545 1755.2384132896748 1601.987500142471 1849.7482365250526 1807.9693784886579 1969.8208883871575 1508.8076845000628 1733.4637977177697 1299.9272175401118 1.0862488889839053 1.5200521814593306 1.238710303079155 1.3502589911234884 1.232367072961174 1.4229629255900822 1.3908235431133817 1.5153316753492585 1.160686278540441 1.3335083490274564 1.0 10.344215134197796 -9.061676974146316 2.778918059130423 1.061099922510619 1.3471801978163809 0.14057748384405788 0.1492255524390457 0.13988207412405926 2.2284623465763884 0.022795221533979292 0.022513989069365293 8.676069571206683e-10 9.061676974146316 0.28608027530576186 HGS(ph)FHEDEDPIGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 HGSFHEDEDPIGSPR 15 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 HGS(1)FHEDEDPIGS(1)PR;HGS(1)FHEDEDPIGS(1)PR 132.6 7.3601e-10 34364000.0 1341.82 1088.34 1264.5 1501.08 1601.6100000000001 1537.3899999999999 1566.8899999999999 1496.58 2405.91 1917.1100000000001 1869.92 True False 1478.0405786043245 1180.0582313295615 1350.3165740562133 1593.7983023999716 1489.1184388545455 1524.8700055600304 1626.5188563851073 1466.7295378557023 2304.797969477397 1796.0633474239603 1639.93169439952 0.901281793413674 0.7195776722649742 0.8233980589969921 0.9718687112657819 0.9080368675963687 0.929837511383899 0.9918210995859044 0.8943845300781033 1.4054231510668653 1.0952061927686627 1.0 10.67942001035709 -8.727911681736012 23.641404211167195 1.1914497783597717 0.8921716664461391 0.5295926306478111 0.11451832492267103 71.13958886016951 50162.48191482859 0.026698873509519515 0.030272367450181317 1.871062601564968e-09 8.727911681736012 -0.2992781119136326 HGS(ph)FHEDEDPIGSPR ddPTM_A549_MK2206_60min_R1 2 HGSFHEDEDPIGSPR 15 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 HGS(1)FHEDEDPIGSPR;HGS(1)FHEDEDPIGSPR 135.09 4.4545999999999993e-10 28734000.0 1086.47 777.46 1121.15 890.6800000000001 1229.1599999999999 1123.13 842.38 875.22 1439.65 1605.44 1324.4099999999999 True False 1269.8395743587885 817.0293931998494 1280.1459286062027 1108.896639984144 1048.3521922584057 1241.9788711266438 995.429542056665 999.2851152488365 1113.5715736486427 1242.769988973495 995.5224451435187 1.2755509235914044 0.8207041410121728 1.2859036326615936 1.1138841172227723 1.0530673591264643 1.2475649114547034 0.999906679063534 1.0037795934422908 1.118580077306148 1.2483595875071727 1.0 9.959310033226485 HGS(ph)FHEDEDPIGSPR ddPTM_A549_PD325901_60min_R1 2 HGSFHEDEDPIGSPR 15 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 HGS(1)FHEDEDPIGSPR;HGS(1)FHEDEDPIGSPR 133.86 5.4586e-10 16652300.0 1163.6999999999998 894.73 943.81 1119.62 1376.3899999999999 1201.9 936.3900000000001 1208.48 1783.19 1465.1399999999999 1379.8899999999999 True False 1281.8379673293375 970.1320371552084 1007.8626221905844 1188.7763845584889 1279.7171146877256 1192.1121248886755 972.0248338622692 1184.37591836578 1708.2487255102642 1372.6308103576432 1210.172277843412 1.059219410986374 0.8016478768494288 0.8328257394778917 0.9823199608215685 1.0574668897293251 0.9850763785575053 0.8032119489585949 0.9786837296226927 1.4115748284652905 1.1342441365486742 1.0 10.240996726127536 -8.55096250415877 22.628306788401023 1.1943957666572724 0.9288048943716309 0.43753797102921255 0.12406793234472457 60.10323647063735 48427.26327843805 0.027991077147026432 0.03173954346416361 2.812143612987916e-09 8.55096250415877 -0.2655908722856415 HGS(ph)FVNKPTR ddPTM_A549_MK2206_60min_R1 4 HGSFVNKPTR 10 1 P29353;P29353-6;P29353-2;P29353-7;Q5T181;Q5T182 P29353 SHC1 SHC-transforming protein 1 1 HGS(1)FVNKPTR;HGS(1)FVNKPTR;HGS(1)FVNKPTR;HGS(1)FVNKPTR 90.412 0.00027682 208798000.0 10250.59 13382.4 14089.7 12323.789999999999 19238.0 14545.9 16324.0 18419.5 22577.000000000004 21611.2 18164.4 True False 11980.638989135876 14063.506999148072 16087.831325231073 15343.11910323596 16408.115684424494 16085.13748321303 19289.85949872147 21030.52053235295 17463.34554806057 16729.21491036974 13653.67816806347 0.8774660455348285 1.0300160019915519 1.1782781992665676 1.1237352246315695 1.2017359338968285 1.1780809013674312 1.4127958240469785 1.5402824259871766 1.2790213254702365 1.2252533496431812 1.0 13.737002031061184 -5.299570728378464 1.2662227695743942 1.192976656359813 0.7430111259817183 0.36397163493845996 0.1413429737096274 1.5569597772230306 2.1902071787317507 0.025977236249082502 0.8906047424239619 5.016828692594808e-06 5.299570728378464 -0.4499655303780947 HGS(ph)FVNKPTR ddPTM_A549_PD325901_60min_R1 6 HGSFVNKPTR 10 1 P29353;P29353-6;P29353-2;P29353-7;Q5T181;Q5T182 P29353 SHC1 SHC-transforming protein 1 1 HGS(1)FVNKPTR;HGS(1)FVNKPTR;HGS(1)FVNKPTR;HGS(1)FVNKPTR;HGS(1)FVNKPTR;HGS(1)FVNKPTR 107.65 7.2729e-05 345591400.0 14561.149999999998 17864.0 21175.5 21785.3 26656.700000000004 25588.3 26435.0 25349.7 24470.1 22557.1 21386.8 True False 16039.387228647915 19369.461973713445 22612.596768625823 23130.92850299393 24784.425352622668 25379.91736857382 27440.998390787045 24844.080347045063 23441.706794064958 21132.840856381223 18756.359182095297 0.8551439580000693 1.0326877293010794 1.2055962753268057 1.2332312619111374 1.3213878616848906 1.3531366680587633 1.463023720348779 1.3245683826934316 1.2498004845440507 1.126702717260528 1.0 14.195092191427474 -5.479173132226831 2.3924726356548263 1.1985103881200694 0.8420091203939346 0.45322654770280846 0.12585960097476726 0.37601353371088886 3.467027137633712 0.023505342524176256 0.22529931896921138 3.317621736373467e-06 5.479173132226831 -0.3565012677261348 HGS(ph)GADS(ph)DYENTQSGDPLLGLEGK ddPTM_A549_PD325901_60min_R1 1 HGSGADSDYENTQSGDPLLGLEGK 24 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 2 HGS(0.793)GADS(0.692)DY(0.314)ENT(0.139)QS(0.061)GDPLLGLEGK 65.69 9.894399999999999e-05 26207000.0 1044.9 1248.3 1483.0 1081.6 1428.6 1345.5 1121.6 1364.5 1136.9 1422.1 1382.0 True False 1150.9774787852757 1353.4986219092314 1583.6452980034512 1148.407975508174 1328.260064402448 1334.5426940991028 1164.2831017630692 1337.2839770704584 1089.1200466762482 1332.3083633028955 1212.0227612198044 0.9496335511281229 1.1167270658737818 1.3066134966059866 0.9475135387328807 1.0959035646043975 1.1010871551256942 0.9606115817423355 1.1033488972802694 0.8985970243497207 1.0992436824883003 1.0 10.243201076864533 -8.071992549045024 1.0957532476534797 0.9559075929293305 1.0946123424873757 0.0003003882506362743 0.11043832838593437 0.48254518642014665 1.14878889707567 0.018993845057066413 0.027282180108944176 8.472419496867099e-09 8.071992549045024 0.13870474955804524 HGS(ph)GADSDYENTQSGDPLLGLEGK ddPTM_A549_MK2206_60min_R1 2 HGSGADSDYENTQSGDPLLGLEGK 24 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 HGS(0.967)GADS(0.032)DYENTQSGDPLLGLEGK;HGS(0.981)GADS(0.019)DYENTQSGDPLLGLEGK 121.72 1.4293e-16 12831700.0 1252.6100000000001 1962.4699999999998 1883.94 1571.26 2364.9 1883.74 2009.2199999999998 2035.83 3562.9 2759.1000000000004 2893.6 True False 1464.0199446257716 2062.3513406129014 2151.111020593471 1956.2187705365407 2017.026342764088 2083.076116474588 2374.2692662350614 2324.415136967893 2755.9088387821666 2135.8173937218294 2175.039260702719 0.6731004681509847 0.9481903972375147 0.9889987088777804 0.8993946941006109 0.9273516939240998 0.9577188578203324 1.0915983491111672 1.0686773241127212 1.2670616519776192 0.9819672832166636 1.0 11.086825727329158 -7.672873686888534 1.6095882012646667 1.1256227783654693 0.8929097038961709 0.419932632725896 0.10476082352966251 0.2605759096187773 1.3731974963265448 0.019464928940014607 0.03148980736620946 2.1238620904320085e-08 7.672873686888534 -0.23271307446929845 HGS(ph)GADSDYENTQSGDPLLGLEGK ddPTM_A549_PD325901_60min_R1 2 HGSGADSDYENTQSGDPLLGLEGK 24 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 HGS(0.742)GADS(0.257)DY(0.001)ENTQSGDPLLGLEGK;HGS(0.813)GADS(0.187)DYENTQSGDPLLGLEGK 134.45 2.8144e-23 53721000.0 2970.0 2980.5 3549.2 3665.4 3807.8 4449.0 3606.8 4219.3 3397.0 3816.1 3982.2 True False 3271.512213601559 3231.677195065659 3790.0700550733973 3891.803433272615 3540.3532641968623 4412.768819061249 3744.05874771669 4135.14275152318 3254.2359033857097 3575.150794740301 3492.4146452456616 0.9367479368623012 0.9253417830740822 1.085229115114651 1.1143589260143134 1.0137264969428705 1.2635294680912232 1.072054474635078 1.1840354515614246 0.9318011272847592 1.0236902423964094 1.0 11.77000914120289 -8.790018577080051 24.998729845413987 0.967794967794091 1.0753104352122251 0.14150498374992326 0.09526093091554583 245.50830011386782 214749.39248360202 0.016842103328954954 0.01793036581041234 1.6217407254168648e-09 8.790018577080051 0.10751546741813411 HGS(ph)GPPSSGGGLYR ddPTM_A549_MK2206_60min_R1 2 HGSGPPSSGGGLYR 14 0 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 HGS(0.999)GPPS(0.001)SGGGLYR;HGS(0.999)GPPS(0.001)SGGGLYR 59.345 0.0025664 28403000.0 1741.94 2187.3 2064.92 1552.24 2066.76 1982.6200000000001 1559.62 1865.58 2775.8999999999996 2536.0 2984.3 True False 2035.9368856558845 2298.624227286329 2357.7567059693365 1932.5388696827026 1762.7423418204162 2192.419532443358 1842.982765951726 2130.031678099135 2147.1630822014145 1963.1158386715078 2243.215947510064 0.9075973661455751 1.0247003770804 1.0510609594169529 0.8615037138211289 0.7858103647029765 0.9773555394329784 0.821580627579529 0.9495437478783255 0.9571807317903269 0.8751345767002668 1.0 11.131352795592546 -9.260266746839704 1.2163885547197686 0.9883668905375804 0.922725971978063 0.0 0.08348471198714251 0.6721383933783144 2.0690218070916204 0.018806069901913983 0.016075799145767795 5.492034454791566e-10 9.260266746839704 -0.06564091855951737 HGS(ph)ILNR ddPTM_A549_MK2206_60min_R1 2 HGSILNR 7 0 Q9NZN5-2;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 HGS(1)ILNR;HGS(1)ILNR 57.59 0.010699 23129000.0 423.19 811.63 375.26 575.12 964.36 680.69 281.44 513.5 1013.5999999999999 896.9000000000001 623.29 True False 494.6141259978607 852.9385002479787 428.4775107423306 716.0244258181182 822.5039214799672 752.7201639945471 332.57400498163236 586.2901975277961 784.0212183865971 694.2896670758968 468.5098910711214 1.0557175748564434 1.8205346706725125 0.9145538203318022 1.5283016206576165 1.7555742944925539 1.6066259823750053 0.7098548212531686 1.2513934256273689 1.6734357872234975 1.4819103722412155 1.0 8.871935695820605 HGS(ph)ILNR ddPTM_A549_PD325901_60min_R1 2 HGSILNR 7 0 Q9NZN5-2;Q9NZN5 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 HGS(1)ILNR;HGS(1)ILNR 76.221 0.005465 24677000.0 1889.17 2442.0 2579.1 2585.3 2669.2 3102.7 2597.5 2612.1000000000004 2559.2 2496.5 2705.5 True False 2080.95714766655 2647.795910199746 2754.1332353882003 2744.988109357697 2481.7246002401052 3077.432639896908 2696.349283906538 2559.999616347193 2451.6457238577323 2338.8705639446453 2372.740651577555 0.8770268028589606 1.1159230185731912 1.1607392630783606 1.1568850171352048 1.04593167339637 1.2969949487951102 1.1363860108831643 1.0789209577730865 1.0332548237953085 0.9857253309120022 1.0 11.212338702458727 -8.69081554857797 2.360256060750366 1.0139481760487263 1.1204069769675735 0.18859662621642515 0.09556678953652326 0.3434889244554287 3.78912725086969 0.01678683538556657 0.018607655082675412 2.0379074239745624e-09 8.69081554857797 0.10645880091884719 HGS(ph)PEFCGILGER ddPTM_A549_MK2206_60min_R1 2 HGSPEFCGILGER 13 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 HGS(1)PEFCGILGER;HGS(1)PEFCGILGER 76.82 0.00029617 11663000.0 705.38 1048.46 811.8299999999999 796.29 1794.1799999999998 985.89 1265.6 1241.3600000000001 1659.3400000000001 1577.37 1653.69 True False 824.4308991147495 1101.82213566526 926.9597013962222 991.3810857468162 1530.2584987358748 1090.2162254191833 1495.5431378082515 1417.3265815055604 1283.5021394214841 1221.0410214689573 1243.0331334778405 0.6632412901240228 0.8863980420075441 0.7457240490466356 0.7975500081587242 1.2310681489675308 0.8770612754053498 1.2031402040136467 1.1402162527559263 1.0325566590734527 0.9823077024927307 1.0 10.279649037100015 -6.648325970322716 8.90922555944057 1.0414430143054874 0.7766067443259617 0.6229715439672278 0.1087586629994218 0.1370205125880018 10.21540711889695 0.01431940359381284 0.029841665434149397 2.2473671563687042e-07 6.648325970322716 -0.2648362699795257 HGS(ph)PEFCGILGER ddPTM_A549_PD325901_60min_R1 2 HGSPEFCGILGER 13 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 HGS(1)PEFCGILGER;HGS(1)PEFCGILGER 96.67299999999999 5.0938e-05 25044000.0 717.19 909.23 1147.22 716.28 954.02 744.13 918.3100000000001 1016.3199999999999 1003.1700000000001 909.79 992.99 True False 789.9986008326267 985.8540030429631 1225.0772479942807 760.5229888100913 887.0129263903287 738.0700519955149 953.2567895685132 996.0487003123843 961.0102535176467 852.345704134267 870.8585250822387 0.9071491844878294 1.1320484035565535 1.4067465756031863 0.8733025708604875 1.0185499720595428 0.8475200399810244 1.094617279515629 1.1437548943076872 1.1035205212314994 0.9787418732035453 1.0 9.766294555280528 -11.039499280957061 1.386104624225946 1.0005695279682474 1.066567320039906 0.02756028184822512 0.14826539371901573 1.6797221410373757 5.832481475581644 0.100680159928751 0.023407973105004996 9.130629470114879e-12 11.039499280957061 0.06599779207165857 HGS(ph)PIPAR ddPTM_A549_MK2206_60min_R1 1 HGSPIPAR 8 0 H0Y7S7;O00482-3;O00482 H0Y7S7 NR5A2 Nuclear receptor subfamily 5 group A member 2 1 HGS(1)PIPAR 54.416000000000004 0.0070696 3084900.0 218.85 107.05 165.59 271.36 252.03 264.24 151.65 312.0 270.07 226.34 473.47 True False 255.78652963121002 112.49838775248092 189.07315195816903 337.8432121818135 214.95672086212218 292.20170141168376 179.20284201060463 356.2269554599269 208.89957621316918 175.209636800043 355.8943318927688 0.7187148170381052 0.3161005322961333 0.5312620489138246 0.9492795526836485 0.603990290373292 0.8210349961395967 0.5035282272059297 1.0009346132752075 0.5869707873743569 0.4923080282515817 1.0 8.47530514590056 -14.99999999999697 0.23850721895389398 2.9793702267105955 0.6167508112533479 0.0 0.2411744727247402 40.01734590444812 0.5073292012668001 37.476045334718314 0.10472559894618434 1.000000000006978e-15 14.99999999999697 -2.3626194154572477 HGS(ph)SDIS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 HGSSDISSPR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 2 HGS(0.893)S(0.105)DIS(0.552)S(0.45)PR;HGS(0.8)S(0.2)DIS(0.657)S(0.343)PR 62.408 0.008114399999999999 4576100.0 816.45 743.25 639.8199999999999 881.6800000000001 1158.85 959.18 952.94 1104.47 972.05 1147.8400000000001 932.5899999999999 True False 899.3354029612774 805.8862859361016 683.2420327502148 936.1393711594377 1077.4563738154677 951.3687560951153 989.2046531687762 1082.440479410046 931.1981188949312 1075.3651865083998 817.8873421750924 1.099583471446791 0.9853267612540926 0.8353742594098579 1.144582295001492 1.3173652632281563 1.1632026894621477 1.2094632135253274 1.3234591411225416 1.1385408122572234 1.3148084473939528 1.0 9.675758326244315 -6.299505546171832 24.770396274853425 1.1246686314617125 0.9746179293751792 0.27730957095255615 0.12531014128047244 578.9199930846916 376713.53637749 0.018848253723587432 0.04380025058476245 5.017581712767181e-07 6.299505546171832 -0.15005070208653326 HGS(ph)VSADEAAR ddPTM_A549_MK2206_60min_R1 4 HGSVSADEAAR 11 0 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5;Q9NWW5-2 A0A1B0GU90 CLN6 Ceroid-lipofuscinosis neuronal protein 6 1 HGS(0.999)VS(0.001)ADEAAR;HGS(1)VSADEAAR;HGS(0.978)VS(0.022)ADEAAR;HGS(0.996)VS(0.004)ADEAAR 116.51 5.8651e-06 283625000.0 5281.7 5704.1 5236.3 4987.43 6735.2 4988.85 4644.200000000001 5284.2 7601.1 7294.7 6109.400000000001 True False 6173.121834832817 5994.414325819022 5978.886077653004 6209.350573894244 5744.461002065491 5516.7667956693895 5487.991024501485 6033.251532183797 5879.462986462471 5646.822203610822 4592.267369137817 1.344242688550558 1.3053278139039308 1.3019464236411653 1.3521317629770389 1.2508986390189198 1.2013165506748673 1.1950504148306673 1.313784901273403 1.2802963141857138 1.2296370724318244 1.0 12.164990925129526 -14.063186137678368 0.23363688650807923 1.0967079998528274e-13 1.318274492531978 0.18721796705732974 0.0852287262905156 8.612113639823496 0.15942104823717448 3.988229833312198 0.031646715648996196 8.645972748253209e-15 14.063186137678368 1.3182744925318683 HGS(ph)VSADEAAR ddPTM_A549_PD325901_60min_R1 3 HGSVSADEAAR 11 0 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5;Q9NWW5-2 A0A1B0GU90 CLN6 Ceroid-lipofuscinosis neuronal protein 6 1 HGS(0.993)VS(0.007)ADEAAR;HGS(0.998)VS(0.002)ADEAAR;HGS(0.993)VS(0.007)ADEAAR 120.55 1.1857999999999999e-05 130423000.0 3605.2000000000003 3725.5 3772.4999999999995 4033.7 5402.1 5714.299999999999 5364.6 5903.700000000001 6649.799999999999 7856.6 6829.200000000001 True False 3971.197249992036 4039.460959643387 4028.524535885382 4282.85248780263 5022.675132233281 5667.764635370125 5568.752788621759 5785.946072136943 6370.3320313024105 7360.532935184254 5989.251693865617 0.6630539928818592 0.6744516954898944 0.6726256871140556 0.7150897485556108 0.8386148034783152 0.946322666849221 0.929791077961451 0.966054921028464 1.0636273706491761 1.2289570235832878 1.0 12.5481600464427 -7.097705238036891 0.8658396155460508 1.0266650644394326 0.6492223357176561 0.8563989418064892 0.06714669792214406 0.08640697134218059 0.12527095294800128 0.006023051451631974 0.0167686410365611 7.985364816759957e-08 7.097705238036891 -0.37744272872177653 HGS(ph)YEDAVHSGALND ddPTM_A549_MK2206_60min_R1 1 HGSYEDAVHSGALND 15 0 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 1 HGS(0.999)Y(0.001)EDAVHSGALND 46.891999999999996 0.009191 3093700.0 238.12 275.64 155.51 147.26 280.88 0.0 105.41 213.23 278.19 269.27 173.01 True False 278.3088345249428 289.6688986463694 177.56365638634492 183.33870661075258 239.562924079486 0.0 124.56163255085944 243.45600548948772 215.18040917814469 208.4417199838631 130.04684216691223 2.140066070714271 2.227419703698655 1.3653822993905989 1.4097897615648478 1.8421279601084994 0.0 0.9578212778976006 1.8720639535177437 1.6546377104794703 1.6028203108256391 1.0 7.022887557564297 -5.786897212699225 5.629282116189744 1.2847151286972052 2.1905824276304036 0.31669897659150326 0.5004834164745667 0.14303609418504123 13.005364345130902 0.07103135458224077 0.2426243017829613 1.6334384986662556e-06 5.786897212699225 0.9058672989331984 HGS(ph)YEDAVHSGALND ddPTM_A549_PD325901_60min_R1 2 HGSYEDAVHSGALND 15 0 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 1 HGS(0.999)YEDAVHS(0.001)GALND;HGS(1)YEDAVHSGALND 64.507 0.0012542999999999999 7302900.0 442.46 441.26 674.0899999999999 666.16 650.8 417.37 673.17 480.77 665.23 458.88 473.39 True False 487.37821347816356 478.4465288021046 719.8378010324658 707.3071902408701 605.0900531381164 413.9710770985826 698.7878527227587 471.18066519323116 637.2726964996396 429.9062384870494 415.16603106645675 1.1739356715341376 1.1524221468049691 1.7338552462574652 1.703673078512653 1.4574652256202003 0.9971217443662127 1.6831527640345454 1.1349210434747923 1.5349827510276957 1.0355043676929174 1.0 8.697544596821231 -10.904421745873176 1.007307087722314 0.9852933606826195 1.410208221186904 0.2629923317511663 0.24365080781793277 0.6278390331168345 1.0641544519927508 0.2013162184001224 0.04157604758375631 1.2461727609064958e-11 10.904421745873176 0.4249148605042845 HGSGADS(ph)DYENTQSGDPLLGLEGK ddPTM_A549_MK2206_60min_R1 2 HGSGADSDYENTQSGDPLLGLEGK 24 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 HGS(0.387)GADS(0.608)DY(0.005)ENTQSGDPLLGLEGK;HGS(0.457)GADS(0.543)DYENTQSGDPLLGLEGK 117.73 2.4888e-16 22841000.0 1585.15 2305.9 2178.2 2019.9299999999998 3394.2 2135.17 2138.66 2151.6000000000004 3790.8 3049.1 3357.3 True False 1852.6845668033477 2423.2604607047706 2487.1015133479314 2514.812940678102 2894.91767626955 2361.1122721888632 2527.226838736564 2456.595888998651 2932.1898526636855 2360.3061923080813 2523.5897532337685 0.734146492879553 0.9602434221329222 0.985541136454893 0.9965220921726998 1.1471427447983398 0.9356165237092503 1.0014412348513204 0.9734529496526642 1.1619122517462794 0.9352971057532418 1.0 11.301261682668585 -4.547801862226416 0.8479740045493519 1.0576205630903077 5.802052904638468e-15 0.47557259634328597 0.0777504328232469 3.622083062456658 0.8064833003235765 0.012390850905006303 4.785958867193581 2.8326840538903663e-05 4.547801862226416 -1.057620563090302 HGT(ph)PDPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 HGTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HGT(1)PDPS(1)PR;HGT(1)PDPS(1)PR 107.11 0.00076151 43732000.0 2422.6000000000004 2990.0 2908.6 2275.3 4534.0 3066.5 2971.0 2960.6 3898.0 3938.4 2975.1000000000004 True False 2831.4756531166076 3142.1782286774196 3321.0832162904185 2832.748602142099 3867.054606153483 3390.9949946220436 3510.7922427530934 3380.2741164572426 3015.1092238269066 3048.712704662406 2236.3005614171457 1.2661427099594784 1.405078674525851 1.485079096070094 1.2667119308627208 1.7292195301793096 1.5163413420927494 1.5699107281573552 1.5115473182706531 1.3482575982166858 1.3632839687391725 1.0 11.126898385779361 -9.951715927127278 0.7476737518188576 1.0235008804966972 1.4714862830612754 0.22137589327254303 0.16180325368731494 0.28422495503974526 0.3234059865800185 0.06188052550425277 0.027893921820170357 1.1175940291990041e-10 9.951715927127278 0.4479854025645782 HGT(ph)PDPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 HGTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HGT(1)PDPS(1)PR 61.343999999999994 0.011713 39156000.0 805.53 791.13 1366.5 1079.3 1274.7 1181.4 1301.0 1134.7 1389.1 1163.8 1461.3 True False 887.3068126001559 857.8013015709769 1459.2389074320408 1145.9659097318538 1185.16946947627 1171.7790700919213 1350.5102669345174 1112.0675183450699 1330.720957725372 1090.3174693846495 1281.5693639439212 0.6923595691063841 0.6693366162648942 1.1386343560377854 0.8941895319698037 0.9247798073363828 0.9143313682888536 1.053794125335859 0.8677388439770254 1.0383526597656727 0.8507674262977775 1.0 10.323695850150516 -5.745938235135485 24.993856955226374 0.9954264252015224 0.6808478299559085 0.5918640741315764 0.0879517287810334 89.23149651529367 143873.3497290189 0.010060255085963562 0.03868030117696108 1.7949888899474868e-06 5.745938235135485 -0.3145785952456138 HGT(ph)PDPSPR ddPTM_A549_PD325901_60min_R1 1 HGTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 HGT(1)PDPSPR 84.213 0.0014532 4689000.0 606.16 567.58 625.84 629.06 669.47 632.39 560.14 534.0 667.66 688.36 628.71 True False 667.696916968593 615.4119585221835 668.3132658816453 667.9156075010839 622.44873674612 627.2400255082366 581.4564342203694 523.3489510851043 639.6005720501927 644.8968321237478 551.3826557210589 1.2109501632680604 1.1161249853196626 1.2120679875352134 1.2113467853420805 1.1288870447550186 1.1375766339403202 1.0545424818631304 0.949157442032169 1.1599939994735031 1.1695994159997611 1.0 9.106910076457675 -7.402326807925338 1.9130833958920548 1.0651418864541202 1.1805419579570589 0.3872637236428452 0.06563773396853438 0.2922668443602578 2.1002846404853335 0.011267711212509746 0.01972082440823642 3.9597994599340945e-08 7.402326807925338 0.11540007150293863 HGT(ph)PQKYDPTFK ddPTM_A549_MK2206_60min_R1 2 HGTPQKYDPTFK 12 1 K7EMR2;K7ER17;K7EPV6;Q8IWA5;Q8IWA5-2 K7EMR2 SLC44A2 Choline transporter-like protein 2 1 HGT(1)PQKYDPTFK;HGT(0.752)PQKY(0.083)DPT(0.165)FK 110.38 4.677e-05 14445400.0 2679.7 3414.0 3583.2 4045.2999999999997 4655.2 3979.0 3710.8 3785.9 5728.5 4768.700000000001 4030.0 True False 3131.9678476251033 3587.758017626995 4091.351640174597 5036.398681600415 3970.4262467061512 4400.055138953565 4385.004326626785 4322.562918832489 4431.003896534749 3691.447357994013 3029.2397776582634 1.0339121619637035 1.184375711717509 1.3506199378305381 1.6625949252171033 1.3107005513361727 1.452527849200172 1.447559337813987 1.4269464407251453 1.4627445239610948 1.2186052042561206 1.0 11.564740062976075 -10.78943785495168 0.9985591536102872 0.9964277805955963 1.381361427990211 0.23322319647482526 0.16632890241766274 0.4210335588942844 0.7341608048804467 0.11610508781662907 0.028088802112388393 1.623910706161493e-11 10.78943785495168 0.3849336473946148 HGT(ph)PQKYDPTFK ddPTM_A549_PD325901_60min_R1 3 HGTPQKYDPTFK 12 1 K7EMR2;K7ER17;K7EPV6;Q8IWA5;Q8IWA5-2 K7EMR2 SLC44A2 Choline transporter-like protein 2 1 HGT(1)PQKYDPTFK;HGT(0.714)PQKY(0.261)DPT(0.025)FK;HGT(0.881)PQKY(0.097)DPT(0.022)FK 85.493 0.00022019 21093200.0 4966.5 5225.5 5980.9 7107.7 7071.2 6668.0 6749.7 6201.299999999999 6654.299999999999 7074.8 6537.3 True False 5470.695423855942 5665.871223893844 6386.799840073396 7546.726486242095 6574.543306315682 6613.6980187683575 7006.563527077565 6077.610206674257 6374.642911951583 6628.095920607079 5733.253543359061 0.9542043418248535 0.988247106297389 1.1139922195611514 1.3163078222807039 1.1467386287025634 1.1535680340579273 1.2220920414715313 1.060063044606508 1.1118717956116655 1.1560793309558988 1.0 12.485138365836852 -10.31727556801857 0.7031020043368342 0.9995192958034458 1.1253594722981755 0.0 0.10518124126783267 1.0240349826505875 0.9246856969678957 0.06902047785514817 0.020931839740645834 4.816420896802719e-11 10.31727556801857 0.12584017649472967 HGVIVAADSR ddPTM_A549_MK2206_60min_R1 1 HGVIVAADSR 10 0 P28074;H0YJM8;P28074-2 P28074 PSMB5 Proteasome subunit beta type-5 0 47.559 0.035387 1286900.0 496.06 307.79 428.55 394.06 304.2 407.54 333.56 306.4 617.19 669.51 424.7 False True 579.7828004974092 323.4551963226167 489.32483405805493 490.6047176900254 259.45258297130323 450.66561229684237 394.163534329425 349.8331383106462 477.3974504499051 518.2672260051108 319.2352688762942 1.8161614865996494 1.0132188635083355 1.5328031761041778 1.5368123936210132 0.8127315753192761 1.4117037064331333 1.234711740080843 1.0958473966302542 1.495440814325875 1.6234648127364113 1.0 8.318476238020786 -11.021412562233154 1.2837070797641215 0.998417856818242 1.3290238948055617 0.0 0.3241485338233125 0.6305998996345705 1.8362465489459636 0.1827774915388685 0.040421369480754546 9.51891475891711e-12 11.021412562233154 0.3306060379873197 HGVVPLATYMR ddPTM_A549_MK2206_60min_R1 1 HGVVPLATYMR 11 0 P46778;M0R181;G3V1B3 P46778 RPL21 60S ribosomal protein L21 0 49.5 0.030385000000000002 1449200.0 564.4 398.25 513.56 535.58 727.38 611.22 441.73 635.83 820.91 729.21 827.19 False True 659.6569217448247 418.5192239367165 586.3905303438451 666.7971240430998 620.3833655544596 675.8988947050003 521.9866231542658 725.9608496477091 634.9751957238961 564.48095454166 621.7758937174044 1.0609239251797644 0.673103007314292 0.943089843573701 1.0724074876182919 0.9977604018151631 1.0870458336105817 0.8395092643966467 1.167560301039359 1.0212283913542823 0.9078527492708092 1.0 9.280250874178824 -5.996408803670669 24.999337685903015 1.0169367979595554 0.8522841935995817 0.18553685318708846 0.11691839247813886 95.53652699103056 665031.1761469276 0.013234949147336868 0.04087484979735608 1.0083033180353087e-06 5.996408803670669 -0.16465260435997364 HGVVPLATYMR ddPTM_A549_PD325901_60min_R1 1 HGVVPLATYMR 11 0 P46778;M0R181;G3V1B3 P46778 RPL21 60S ribosomal protein L21 0 55.31399999999999 0.018567 2144000.0 596.07 892.06 800.4 786.43 1246.7 1249.3 635.21 827.6 1335.5 1038.5 1031.3 False True 656.5825875964586 967.2370268848426 854.7199571961987 835.0059949878827 1159.1360928815138 1239.1261150040953 659.3832641502497 811.0928687603596 1279.3735793263525 972.9289327684808 904.4566379493374 0.7259414769569491 1.0694122706400235 0.9450093253050738 0.9232128550475132 1.281582824699709 1.3700226887753841 0.7290380063385468 0.8967736370417267 1.414521742277285 1.075705447830412 1.0 9.820907527651608 -4.318278014305571 0.5001924051691201 1.1600438540688613 3.867071875020633e-12 0.13474842351892735 0.2079555662564507 12.18904634878629 1.0208106420872718 0.045045818716062475 10.295115545162535 4.8053163687510434e-05 4.318278014305571 -1.1600438540649942 HGVYNPNK ddPTM_A549_MK2206_60min_R1 1 HGVYNPNK 8 0 G3XAL0;P40926 G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial 0 66.682 0.0089911 2933200.0 1569.7 1611.7 1523.3 1310.5 1947.3 1886.9 1515.4 1873.0 2579.2 2552.4 2277.2 False True 1834.6269845195804 1693.72864587271 1739.3268456904332 1631.57255883058 1660.854749572712 2086.570505577149 1790.7285643446767 2138.503485821931 1995.015318136061 1975.8110672812136 1711.7083924772694 1.071810474601002 0.9894960224045299 1.0161350223756238 0.9531837116655643 0.9702907089034252 1.2189988170574781 1.0461645057152786 1.2493386696123996 1.1655112090960633 1.1542918618408604 1.0 10.741221229064529 -7.212354193713478 24.998773792312637 1.100379488562764 0.9978645628194305 0.4012460737664052 0.07690131688322757 441.5799058659629 224893.9201610563 0.013131898427878036 0.022745094403569397 6.132616487723771e-08 7.212354193713478 -0.10251492574333354 HGVYNPNK ddPTM_A549_PD325901_60min_R1 2 HGVYNPNK 8 0 G3XAL0;P40926 G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial 0 ; 69.176 0.0077294 14246500.0 2559.56 2691.0 2974.8999999999996 2804.6 3983.4 3066.8 3503.3999999999996 3684.0 4002.7000000000003 3460.2 3417.8 False True 2819.404646951518 2917.7800140653203 3176.79460352695 2977.8337722912606 3703.6197259839764 3041.8249975942986 3636.7238041340406 3610.519729957911 3834.4804387641984 3241.722381478574 2997.432267219283 0.9406066244716444 0.9734265044034319 1.0598386620005467 0.9934615720453948 1.2355974700371872 1.0148102530490868 1.2132797274207727 1.2045375535065515 1.2792550746514264 1.0814997946512128 1.0 11.549511438184522 -6.215155591978375 1.0599104062785603 1.1437353815791564 0.9442305158783251 0.3823366583815023 0.09032346487352472 0.6632781512230606 1.2341377469209176 0.017779635263475795 0.10088116538044462 6.093185613666644e-07 6.215155591978375 -0.19950486570083137 HGYIGEFEIIDDHR ddPTM_A549_MK2206_60min_R1 2 HGYIGEFEIIDDHR 14 0 I3L3P7;P62244;I3L246;H3BN98 I3L3P7 RPS15A 40S ribosomal protein S15a 0 ; 113.99 4.3835000000000005e-06 10812600.0 139.82 264.776 378.68 450.31 623.45 324.03000000000003 446.88 675.56 817.51 388.5 263.41999999999996 False True 163.41819772920167 278.2519674502651 432.382518168485 560.6359702151838 531.7413308792211 358.3186395262939 528.072311491586 771.3226988157307 632.3452902952116 300.73758017503195 198.00554397785112 0.825321324071015 1.4052736194163853 2.183688948713735 2.8314155197487625 2.685487083829843 1.8096394289160682 2.666957201716817 3.895460113490614 3.1935736625937388 1.5188341403646377 1.0 7.629397014813849 -5.622919348820389 2.667025527624922 2.3135359434800082 0.8783319837054442 0.30747597096809176 0.7647288684164034 0.37220870829123903 4.914885194385628 0.1377478465743599 0.8275965324887613 2.3827619219456565e-06 5.622919348820389 -1.435203959774564 HGYIGEFEIIDDHR ddPTM_A549_PD325901_60min_R1 2 HGYIGEFEIIDDHR 14 0 I3L3P7;P62244;I3L246;H3BN98 I3L3P7 RPS15A 40S ribosomal protein S15a 0 ; 96.756 4.4276999999999996e-05 12295100.0 0.0 459.83000000000004 495.4 630.42 764.25 810.44 854.28 835.09 787.26 554.18 310.81 False True 0.0 498.58148787352565 529.0208230822046 669.3596116122995 710.571716519369 803.8400453405256 886.7900928799535 818.4334748345688 754.1741999703955 519.1889802230493 272.58234038692297 0.0 1.8291041421311567 1.940774381536509 2.4556235398894968 2.606814937133244 2.948980642691296 3.253292533996076 3.0025183350939955 2.7667757159171296 1.9047051231788352 1.0 8.090548288009236 -5.323240549258006 3.271884390457889 2.1896082583327354 1.6668185098419385e-22 0.5187913367009578 0.64182336339107 0.26242558837799274 4.536707545701725 0.12197604510475829 1.313018232604551 4.750720177270091e-06 5.323240549258006 -2.1896082583327354 HGYIPGK ddPTM_A549_MK2206_60min_R1 1 HGYIPGK 7 0 H0YHL7;B4E3S0;Q9ULV4;Q9ULV4-2;Q9ULV4-3 H0YHL7 CORO1C Coronin;Coronin-1C 0 51.688 0.052828999999999994 1472300.0 737.68 1093.9 712.05 854.72 1007.0 922.47 829.84 961.22 1134.9 1236.6 895.77 False True 862.1823494555674 1149.5748375753283 813.0293970156062 1064.126438369839 858.8716339648333 1020.0851631139724 980.6111863770534 1097.4758786127916 877.8469620628933 957.2512011440008 673.3255870056929 1.28048356708042 1.7073090043815737 1.2074832929358617 1.5804039812329929 1.275566606319346 1.514995394204955 1.4563700018261188 1.629933422689776 1.3037481108756248 1.4216765553213817 1.0 9.395160479413907 -9.783245227500279 0.8153557825738641 1.033338717023982 1.454870509249318 0.06548903397223982 0.19174650452944608 0.27754780963470843 0.38523763881232836 0.05437956885927181 0.029683503905482914 1.6472320074852945e-10 9.783245227500279 0.4215317922253359 HHEDNLLR ddPTM_A549_MK2206_60min_R1 2 HHEDNLLR 8 0 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 ; 150.05 0.00070247 7023400.0 889.35 782.8199999999999 856.1700000000001 369.17 1210.78 796.9300000000001 868.05 571.96 1408.4099999999999 1389.8 1485.7 False True 1039.4505374800851 822.6621943054379 977.587780131805 459.61666657267085 1032.675865910567 881.2606036406795 1025.7634487788025 653.037081554038 1089.4073837686133 1075.8432147419799 1116.7596867659754 0.9307736926735153 0.7366510486134985 0.8753788229612779 0.41156273101482993 0.9247073279490354 0.7891228650925987 0.9185176192644553 0.5847606152807756 0.9755074405698045 0.9633614353124749 1.0 10.125103053284564 -8.894390152302762 11.100843957387948 0.9892007518923556 0.7723917666107141 0.27584118752113007 0.15014984717316293 0.313820498833824 30.931816874669877 0.024061918786850923 0.025599254401241833 1.2752926235972632e-09 8.894390152302762 -0.2168089852816415 HHFETLTES(ph)PCR ddPTM_A549_MK2206_60min_R1 1 HHFETLTESPCR 12 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 HHFET(0.008)LT(0.204)ES(0.787)PCR 70.529 0.00092521 6204100.0 2688.4 2753.8 2432.1 2181.1 2730.9 1687.9 2052.8 1899.2 2912.9 3340.2 3161.7 True False 3142.1361949305247 2893.9566575691924 2777.0083512136175 2715.4695979132985 2329.1882276013557 1866.5124576626586 2425.767188126404 2168.417416056067 2253.1328009454596 2585.6465001303523 2376.5626315191384 1.3221348149036656 1.2177068759678877 1.1684978608952155 1.1426038438454806 0.9800659981397165 0.7853832391825301 1.020704085789573 0.9124175341720232 0.9480637165052198 1.0879774283405121 1.0 11.214660707338066 -6.494717922666118 1.7684132149799943 0.9588691545184862 1.2494888452425612 0.7150717250136638 0.07780687799637209 0.12913516129276906 0.7906164208648762 0.010124775011581332 0.02922625756628099 3.200973489550489e-07 6.494717922666118 0.290619690724075 HHNS(ph)TAELQK ddPTM_A549_MK2206_60min_R1 7 HHNSTAELQK 10 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 HHNS(0.931)T(0.069)AELQK;HHNS(0.75)T(0.25)AELQK;HHNS(0.881)T(0.119)AELQK;HHNS(0.982)T(0.018)AELQK;HHNS(0.81)T(0.19)AELQK;HHNS(0.98)T(0.02)AELQK;HHNS(0.86)T(0.14)AELQK 116.54 5.036e-05 86262180.0 7972.179999999999 8472.47 7739.89 3370.2200000000003 9856.84 8552.800000000001 6913.42 4354.21 10359.429999999998 12928.5 10324.29 True False 9317.689082912219 8903.682534154712 8837.522785853695 4195.924051294926 8406.911893276994 9457.851619110848 8169.4989252420355 4971.432601708874 8013.035645610365 10007.942870766794 7760.483857091672 1.2006582649350588 1.1473102319539477 1.1387850227634717 0.5406781495280883 1.0832973881640904 1.2187193212789291 1.0527048410488733 0.6406085874614491 1.032543304408514 1.2896029493858625 1.0 12.92193089022715 HHNS(ph)TAELQK ddPTM_A549_PD325901_60min_R1 5 HHNSTAELQK 10 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 HHNS(0.947)T(0.053)AELQK;HHNS(0.887)T(0.113)AELQK;HHNS(0.847)T(0.153)AELQK;HHNS(0.969)T(0.031)AELQK;HHNS(0.8)T(0.2)AELQK 140.31 2.5280999999999997e-08 343848000.0 23693.04 26834.600000000002 30134.87 20818.31 34999.0 34587.7 16376.809999999998 9878.1 39200.9 34785.1 32254.0 True False 26098.339978905824 29096.045918036885 32180.003493894324 22104.209726887566 32540.790979995283 34306.02923871539 17000.03846628429 9681.073546280466 37553.42249780187 32588.762849537678 28286.96247495193 0.9226278714802224 1.0286026979320029 1.1376266901188021 0.7814274772860753 1.1503812404322349 1.2127858998325938 0.60098494072447 0.3422450733214301 1.3275876662634023 1.152077140781552 1.0 14.787849644385346 HHNS(ph)TAELQKAEAK ddPTM_A549_PD325901_60min_R1 2 HHNSTAELQKAEAK 14 1 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 HHNS(0.922)T(0.078)AELQKAEAK;HHNS(0.794)T(0.206)AELQKAEAK 177.64 1.9967e-23 23396000.0 2409.0 3262.8 3824.2 2776.3 3664.2 7942.2 2671.6000000000004 1851.1100000000001 5183.9 4092.0 4916.3 True False 2653.55990658793 3537.767606797597 4083.733208782737 2947.785745565224 3406.8392328037567 7877.521356428018 2773.269199955617 1814.188158882297 4966.038710497847 3833.6304216549124 4311.626266993434 0.6154429308731111 0.8205181497014441 0.9471445241079278 0.6836830381453173 0.7901517946682796 1.8270417862356005 0.6432072327756417 0.42076656151075903 1.1517785640453353 0.8891379225055525 1.0 12.074016414950378 -4.357421518788444 0.396749884298303 1.0368797222843744 6.986506715933915e-10 0.03616268467587558 0.3471994619355658 18.287511836272245 1.1341686504272965 0.08138429645199056 10.516666633707628 4.3911521083538704e-05 4.357421518788444 -1.0368797215857237 HHNST(ph)AELQK ddPTM_A549_MK2206_60min_R1 1 HHNSTAELQK 10 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 HHNS(0.333)T(0.667)AELQK 128.54 1.287e-06 280730000.0 3975.3 4583.0 3723.6 1704.1 4597.2 4062.9 3409.7 2110.9 5359.5 6745.5 4973.8 True False 4646.2334532462855 4816.255124424287 4251.662471353575 2121.6045764999553 3920.9579698740154 4492.833381265254 4029.1983541283157 2410.126539360127 4145.581807362833 5221.686865046787 3738.6681901033944 1.2427509522094797 1.288227486240519 1.137213107760706 0.567476028526961 1.0487579454772582 1.2017202792048263 1.0777095343186598 0.6446484193863361 1.1088391899384324 1.396670311334149 1.0 11.868308721160588 -6.002500047299514 24.834750503984875 1.004440820648232 1.2522971045708806 0.17542874270078035 0.22007955863077758 103.34861498016882 1026687.6834302787 0.025502722952807762 0.07741120996009582 9.942599656669485e-07 6.002500047299514 0.24785628392264858 HHPEES(ph)PLGAK ddPTM_A549_MK2206_60min_R1 1 HHPEESPLGAK 11 0 Q8IX21;Q8IX21-2;A0A3B3IRS8;B1AL16 Q8IX21 FAM178A Protein FAM178A 1 HHPEES(1)PLGAK 80.312 7.5133e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 HHS(ph)VEIKIEK ddPTM_A549_MK2206_60min_R1 1 HHSVEIKIEK 10 1 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 1 HHS(1)VEIKIEK 54.523999999999994 0.008015000000000001 4023200.0 973.12 1044.4 712.0 623.91 1233.3 1055.7 717.79 648.47 1462.5 1863.6 1347.2 True False 1137.3588655002197 1097.5554990069224 812.9723062637624 776.7679780083839 1051.8832037426307 1167.4134732830548 848.2031517757466 740.3926083560857 1131.246085132595 1442.6114656735879 1012.6530591715168 1.123147612303397 1.0838415872706364 0.8028142500540911 0.7670622934214825 1.0387399654953982 1.152826688972976 0.8376048875709596 0.7311414325473169 1.1171112108801635 1.4245860935371424 1.0 9.983924267739779 HHVLHDQNVDKR ddPTM_A549_MK2206_60min_R1 2 HHVLHDQNVDKR 12 1 E9PFG7;A0A0D9SFS3;E9PDF2;E9PCR7;Q02218-2;Q02218 E9PFG7 OGDH 2-oxoglutarate dehydrogenase, mitochondrial 0 ; 103.43 3.531e-05 13675200.0 2083.71 1436.24 1594.5500000000002 351.98 1053.56 1675.02 942.75 331.48 1644.13 3065.3999999999996 1875.7800000000002 False True 2435.389306181624 1509.338481322964 1820.6811670686532 438.2151158009826 898.582719642493 1852.269504611712 1114.0354718463407 378.46830511492493 1271.737180136105 2372.9240109872376 1409.9720571056628 1.7272606885422246 1.0704740379190754 1.2912888293730291 0.3107970215385218 0.6373053388639982 1.3136923496299497 0.7901117374859119 0.2684225571759417 0.901959137223385 1.6829581827729878 1.0 10.461450856169455 -5.147232953119282 1.380499016804496 0.8686496219386335 2.231603581261709 0.26069583769978577 0.39986199128899275 1.330886395199815 1.8178793667844408 0.045525804017416724 2.7026804347263766 7.124707622998407e-06 5.147232953119282 1.3629539593230757 HHYDS(ph)DEK ddPTM_A549_MK2206_60min_R1 2 HHYDSDEK 8 0 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 HHYDS(1)DEK;HHYDS(1)DEK 117.7 0.00038687 21027000.0 2655.2799999999997 2073.5 2082.04 1194.52 2848.46 2888.2 2303.85 1745.31 3028.65 2716.91 2587.95 True False 3103.4263486367795 2179.0322933654297 2377.3045794008476 1487.17745362404 2429.4553073321454 3193.827406968003 2722.4297234825694 1992.7130372877066 2342.6656107602284 2103.1581440240566 1945.2905912135734 1.595353600461667 1.120157730267968 1.2220819810359342 0.7645014376470414 1.2488906892910663 1.6418253506153686 1.3994977078381776 1.0243780781587746 1.2042754030382432 1.0811537122132469 1.0 10.925769968505001 -10.18554390075815 0.5974127500393421 0.9944146699206102 1.2472750465028584 0.10762820725162625 0.2338789983930289 1.4772412702355255 0.9702466125250848 0.18306512000819825 0.0554373592127581 6.523130984449283e-11 10.18554390075815 0.25286037658224814 HHYDS(ph)DEK ddPTM_A549_PD325901_60min_R1 2 HHYDSDEK 8 0 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 HHYDS(1)DEK;HHYDS(1)DEK 125.75 0.00033524 20068800.0 3742.0 3693.8 4153.799999999999 2964.0 4797.8 3544.8999999999996 2661.5 1399.87 3413.2 4086.0 4249.9 True False 4121.8850852851965 4005.089489392226 4435.701846828545 3147.0795482675935 4460.819079511454 3516.031509707851 2762.784838928682 1371.9484946732293 3269.7550737227266 3828.0092626788796 3727.1892423357776 1.1058963785541698 1.0745602728994497 1.1900930053255767 0.8443573276401073 1.1968319260107976 0.9433466564483866 0.7412515596329858 0.36809198714403035 0.8772710107076872 1.0270498796245504 1.0 11.863872356223665 -7.511070601472335 22.986210051243607 0.8732956268815593 1.0742203378507464 0.30134905310800286 0.18941947019412314 265.7191285660851 517259.2116287693 0.03082903425815128 0.04767896736928957 3.0826867697708446e-08 7.511070601472335 0.20092471096918718 HHYDS(ph)DEKSETR ddPTM_A549_MK2206_60min_R1 2 HHYDSDEKSETR 12 1 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 HHYDS(1)DEKSETR;HHYDS(0.957)DEKS(0.04)ET(0.003)R 169.94 5.171000000000001e-16 90538400.0 4170.54 4797.6 4578.69 1683.81 6049.7 4184.85 4356.88 3324.17 6525.1 7739.400000000001 6103.9 True False 4874.425192086575 5041.777347793579 5228.017091245536 2096.3435255891022 5159.797143989128 4627.688049321396 5148.468699631807 3795.381277343669 5047.1752684435505 5991.06416475326 4588.133170930092 1.0623983678090247 1.0988733674379214 1.139464984227066 0.456905553411419 1.1245962032403585 1.00862112691975 1.1221271283606018 0.8272168954011161 1.1000498635091716 1.3057738172710385 1.0 12.163691550961811 HHYDS(ph)DEKSETR ddPTM_A549_PD325901_60min_R1 2 HHYDSDEKSETR 12 1 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 HHYDS(0.997)DEKS(0.002)ETR;HHYDS(1)DEKSETR 199.84 5.6891e-25 212378000.0 5855.5 6022.400000000001 6231.4 3764.55 9852.6 8693.6 3874.2 1713.8200000000002 9199.3 7649.6 7147.0 True False 6449.946049408732 6529.928783614639 6654.300276452263 3997.077703586629 9160.587365624775 8622.802203953894 4021.6348010435845 1679.6365156342201 8812.68541242749 7166.6029505110955 6267.964308565803 1.029033627487992 1.041794187419165 1.0616365934564262 0.6376994996803381 1.4614932240609464 1.3756942093894773 0.6416173741684548 0.2679716145382047 1.40598844833626 1.1433700955694999 1.0 12.61378124941168 HHYDSDEKS(ph)ETR ddPTM_A549_MK2206_60min_R1 1 HHYDSDEKSETR 12 1 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 HHY(0.049)DS(0.28)DEKS(0.622)ET(0.05)R 69.714 0.0014632 75361000.0 1052.5 983.83 1126.8 618.29 983.34 816.57 796.07 693.6 1350.0 1769.6 1109.5 True False 1230.1362688455501 1033.902744722311 1286.5971835646167 769.7710777560927 838.6919886226214 902.9788954047025 940.7056145030144 791.9199240609141 1044.2271555070104 1369.8461309594236 833.9805293577776 1.475017971693943 1.2397204830650987 1.5427184907486808 0.9230084524261848 1.0056493636229995 1.0827337852840022 1.12797071560822 0.9495664421215528 1.2521001615123282 1.642539702952417 1.0 9.703869891757757 -6.258738387876977 24.99999716102121 1.0887590979329267 1.4012091325823333 0.2878348794794088 0.20183514362015934 138.00110556058374 1277310.2359847287 0.017791667620530312 0.04487004986424867 5.511395941999299e-07 6.258738387876977 0.31245003464940657 HHYEQQQEDLAR ddPTM_A549_MK2206_60min_R1 2 HHYEQQQEDLAR 12 0 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5;K7EMY3;Q8TDI0;Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y5Z7;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0 Q12873;Q14839-2 CHD3;CHD5;CHD4 Chromodomain-helicase-DNA-binding protein 3;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 4 0 ; 96.64 0.00027507 9152600.0 688.8299999999999 671.4100000000001 698.51 574.13 575.97 295.26 440.15999999999997 486.62 567.11 1206.72 1163.78 False True 805.0876637234018 705.5819011760229 797.5692214161522 714.791875773675 491.24557598284514 326.50421722227424 520.1313744766751 555.5998752112489 438.66049048857843 934.1211138965617 874.7813073059882 0.9203302093900271 0.8065809080317016 0.9117355557955148 0.8171092246757957 0.5615638695981111 0.3732409626216063 0.5945844637198441 0.6351300268661395 0.5014516049039673 1.0678338758441452 1.0 9.772778582377146 -6.539144141946467 21.980501500140097 0.6944687260491944 0.8709471973131562 0.1791375388213705 0.19367283066561855 97.82847195195669 132201.47061189948 0.03210911597866014 0.06687059427574543 2.8897206275189075e-07 6.539144141946467 0.17647847126396177 HIADLAGNSEVILPVPAFNVINGGSHAGNK ddPTM_A549_MK2206_60min_R1 1 HIADLAGNSEVILPVPAFNVINGGSHAGNK 30 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90;A0A2R8YEM5 P06733 ENO1 Alpha-enolase;Enolase 0 99.34 3.2269e-10 9654700.0 2047.1 2877.6 2576.5 2811.5 3787.8 2539.1 3632.7 3076.1 4524.0 3704.2 4284.4 False True 2392.600433210189 3024.0575487766387 2941.8864425401457 3500.317626213031 3230.619637668318 2807.7858766818294 4292.714567569557 3512.146595161155 3499.32122334349 2867.4186473213717 3220.4652365754496 0.7429362708334686 0.9390126353272904 0.9134973447713609 1.0868981246744238 1.003153085143582 0.8718572226128262 1.3329485810982724 1.0905711868189178 1.0865887274922328 0.8903740412271932 1.0 11.653053403441941 -4.419812978759158 0.6796592001757905 1.0567961377423214 3.4161559499617287e-12 0.35643243604030816 0.11841707784733492 5.702293077739613 0.8013599092864262 0.017263235980478905 6.092394502181188 3.803531534198277e-05 4.419812978759158 -1.0567961377389052 HIADLAGNSEVILPVPAFNVINGGSHAGNK ddPTM_A549_PD325901_60min_R1 1 HIADLAGNSEVILPVPAFNVINGGSHAGNK 30 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90;A0A2R8YEM5 P06733 ENO1 Alpha-enolase;Enolase 0 162.07 3.8791e-46 11736000.0 3536.8 3760.5 4464.4 4158.6 4934.1 5094.9 5426.8 5229.5 5446.2 4856.4 4998.8 False True 3895.853332345453 4077.410532475897 4767.381030618074 4415.467277134148 4587.545837720928 5053.408823608709 5633.319843658907 5125.193520036613 5217.3151536706655 4549.766075201589 4383.979290004024 0.8886568741847038 0.9300706647435268 1.087455189737837 1.0071825127463354 1.0464341946553122 1.1526990638689971 1.2849786623088124 1.1690733876691988 1.1900866332938076 1.0378165073853287 1.0 12.098025267659645 -5.596270453933829 0.8788147022393527 1.1138436401293887 0.8159409322883534 0.4894475270077102 0.08073762125083564 1.2037495079670306 0.935750414775887 0.015456147284361949 0.30609584353092956 2.5335503878622638e-06 5.596270453933829 -0.29790270784103534 HIAEDADR ddPTM_A549_MK2206_60min_R1 2 HIAEDADR 8 0 H7BYY1;P09493-2;P09493-8;P09493-7;F5H7S3;H0YKJ4;H0YK48;A0A494BZZ2;B7Z596;P09493-5;P09493-6;A0A494C0V8;H0YL42;P09493-9;P09493-3;Q6ZN40;A0A0S2Z4G6;P09493-4;P09493-10;P09493;H0YKX5 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 0 ; 64.265 0.010214 6940500.0 466.53 507.23 367.881 451.58 539.38 605.0 460.18 409.31 792.22 769.75 714.1800000000001 False True 545.268858436593 533.0458404455009 420.05205758513927 562.2171202721962 460.03791651236554 669.0206984335023 543.7887493335974 467.3309459593031 612.7834349153803 595.8629403854073 536.8293956347343 1.0157209401543297 0.9929520342589291 0.7824684359702019 1.0472919792468594 0.8569536621004662 1.2462445310813655 1.012963808903636 0.8705390385836493 1.1414863640073953 1.1099670495518845 1.0 9.068319862384584 -7.213603329998781 24.999648930065245 1.058739819847406 0.9393818933765412 0.23462386602506047 0.1117435838856777 493.27704871659137 257791.96911000853 0.01630334721200847 0.0282382267176784 6.115002937560048e-08 7.213603329998781 -0.11935792647086485 HIAEDADR ddPTM_A549_PD325901_60min_R1 1 HIAEDADR 8 0 H7BYY1;P09493-2;P09493-8;P09493-7;F5H7S3;H0YKJ4;H0YK48;A0A494BZZ2;B7Z596;P09493-5;P09493-6;A0A494C0V8;H0YL42;P09493-9;P09493-3;Q6ZN40;A0A0S2Z4G6;P09493-4;P09493-10;P09493;H0YKX5 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 0 70.525 0.007046800000000001 4148000.0 208.61 283.74 276.71 260.5 485.39 318.64 257.03 273.93 308.16 284.84 373.55 False True 229.78793362943472 307.6517655856168 295.4892045924039 276.5904933615748 451.29788090459493 316.04510148475543 266.8114173022129 268.46625125607216 295.2091068552667 266.8551537889013 327.60571812855125 0.7014161258909004 0.9390915620859077 0.9019659555406632 0.8442785887303765 1.377564114212156 0.9647117983476117 0.8144284502308873 0.819479747758026 0.9011109712664654 0.8145619536597598 1.0 8.355816728205749 -2.000010059707321 0.010395624483164861 1.7394112668106274 6.2405661363400465e-06 0.0 0.16809624378685423 37308.67713832231 29.15737270532828 2080.924108678651 2855.649670474973 0.00999976836936151 2.000010059707321 -1.7394050262444911 HIAEEADR ddPTM_A549_MK2206_60min_R1 2 HIAEEADR 8 0 P06753-2;P06753-3;P06753-6;A0A087WWU8;J3KN67;P06753-5;A0A2R2Y2Q3;P06753-4;P06753;A0A494C0P6;P06753-7;P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YGX3;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72 P06753-2;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain 0 ; 123.98 0.0012117 18262600.0 487.79 954.9200000000001 978.3 659.85 825.72 782.49 727.26 754.47 1008.9300000000001 835.9000000000001 785.71 False True 570.1170266794969 1003.5213492069037 1117.0376505868514 821.5132796217925 704.2576818246702 865.2925724251759 859.3937281940806 861.4184329674714 780.4089659301388 647.0696094422375 590.5965225071651 0.9653240494191705 1.6991656925896121 1.891371872365367 1.390989022648412 1.1924514537183482 1.4651162671122537 1.4551283244029845 1.4585565612723714 1.3213910617305928 1.095620418988138 1.0 9.206029051535387 -10.07565696373327 0.427523244390889 0.9405319443305071 1.4823860726245188 0.28762719586322816 0.22944843720637806 1.1630085563593164 0.3846956175439438 0.2653985320496091 0.07404830506713944 8.401233128782865e-11 10.07565696373327 0.5418541282940117 HIAEEADR ddPTM_A549_PD325901_60min_R1 2 HIAEEADR 8 0 P06753-2;P06753-3;P06753-6;A0A087WWU8;J3KN67;P06753-5;A0A2R2Y2Q3;P06753-4;P06753;A0A494C0P6;P06753-7;P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YGX3;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72 P06753-2;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain 0 ; 124.98 0.0011893 14052500.0 690.87 566.27 940.77 976.3799999999999 1095.72 857.16 952.5799999999999 938.9200000000001 821.47 681.9100000000001 990.81 False True 761.0066138083865 613.991560224738 1004.6163095095797 1036.6887750801325 1018.7604072287903 850.1795731504918 988.8309531717774 920.1925040315091 786.9464726388755 638.8540862245112 868.9466512620801 0.8757805933230554 0.7065929298800578 1.1561311710568762 1.1930407621393322 1.1724084623021642 0.9784024967651 1.1379650888067459 1.0589746823870008 0.9056326662815198 0.735205188139713 1.0 9.763123795672584 -5.7525823861232634 24.999915033046953 1.0155491267887926 0.7911867411401425 0.32263722975722786 0.13462109513749682 165.07503141230058 465933.0991073816 0.016924632009344114 0.06361440105870712 1.76773684437305e-06 5.7525823861232634 -0.22436238564865008 HIALS(ph)PR ddPTM_A549_MK2206_60min_R1 2 HIALSPR 7 0 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HIALS(1)PR;HIALS(1)PR 59.908 0.0089709 12352300.0 1340.35 1404.22 1600.6100000000001 1810.6299999999999 2436.3 1774.63 1839.2599999999998 1915.38 2553.0 2620.0 2425.12 True False 1566.568311588725 1475.6888000914407 1827.600566192191 2254.234431282269 2077.9234973470952 1962.420168695946 2173.429734232937 2186.8909806052393 1974.7495763032578 2028.1401803309727 1822.8957740929552 0.8593844661076276 0.8095299912721124 1.002580944103388 1.2366227753223802 1.1399025259033462 1.0765399736978467 1.1922951191844207 1.1996796589719467 1.083303611960954 1.1125925075667829 1.0 10.832016360851085 -5.893928925475904 4.425125704706412 1.0839724089352625 0.8364786770099097 0.6723709977517253 0.07479061450582682 0.11927473283936903 4.050275251928497 0.012512138950421269 0.04197539007850352 1.2766477216772532e-06 5.893928925475904 -0.24749373192535273 HIALS(ph)PR ddPTM_A549_PD325901_60min_R1 2 HIALSPR 7 0 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HIALS(1)PR;HIALS(1)PR 88.26700000000001 0.0039364000000000005 19099200.0 537.91 563.63 704.3399999999999 773.37 973.56 780.3199999999999 1068.03 1017.19 1144.21 561.16 689.36 True False 592.5182272115873 611.1290781596572 752.1407479404925 821.1393084492947 905.1805041996682 773.9653326342714 1108.6744660984405 996.9013474798826 1096.122832797458 525.7282618318354 604.5730902130853 0.9800605366056746 1.0108439956271644 1.2440857195205233 1.3582134596164037 1.4972226168396483 1.2801848861011706 1.833813783719156 1.6489343697525787 1.8130526325793348 0.8695859447639978 1.0 9.23977295524361 -5.960738338265737 1.5405061601031929 1.4457924806791922 0.9547692303678232 0.23962484349437896 0.28461901571455206 0.5328106259064691 2.2401036806725725 0.047291416820715436 0.26385638816106877 1.094615671837315e-06 5.960738338265737 -0.49102325031136895 HIEALLGS(ph)PCGK ddPTM_A549_MK2206_60min_R1 2 HIEALLGSPCGK 12 0 P49589-3;E9PLP0 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 HIEALLGS(1)PCGK;HIEALLGS(1)PCGK 86.291 9.9615e-05 4049900.0 906.24 989.76 941.16 898.4 1312.3200000000002 1126.58 1122.3200000000002 953.31 1220.67 1190.5900000000001 1561.72 True False 1059.1911565592318 1040.1345563932325 1074.6306401168565 1118.508040330708 1119.2794664197922 1245.7939478367198 1326.2310164546118 1088.4446118894314 944.190194009439 921.6348920993341 1173.9018227207107 0.9022825725786693 0.8860490172700725 0.9154348509539095 0.9528122528495453 0.953469399873388 1.0612420252908266 1.1297631461043762 0.9272024208692187 0.804317853277647 0.7851038939212936 1.0 10.197096040813035 -3.590484118164076 13.802569721921873 0.9336538460111421 0.5786574095212403 0.0 0.09644495859263386 0.0 0.0 0.013636185292735893 0.0 0.0002567532099186128 3.590484118164076 -0.35499643648990176 HIEALLGS(ph)PCGK ddPTM_A549_PD325901_60min_R1 2 HIEALLGSPCGK 12 0 P49589-3;E9PLP0 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 HIEALLGS(1)PCGK;HIEALLGS(1)PCGK 76.58800000000001 0.0003517 9606400.0 1671.26 1465.26 2062.8 2052.7200000000003 2146.38 2364.92 2214.9 1858.56 2184.57 2078.8 2038.04 True False 1840.9250848834138 1588.7426025304178 2202.7940126240846 2179.511852334634 1995.6256734090207 2345.6608756067285 2299.1892315397845 1821.489562787885 2092.7601199468118 1947.544213229774 1787.3740002000081 1.0299607606899357 0.8888697062576923 1.2324191872420607 1.2193932842766795 1.1165126454707908 1.312350339293426 1.2863503840172812 1.0190869748491693 1.1708574253136896 1.0896120302812073 1.0 10.803625828262955 -4.035534439050183 12.523438790081968 1.1097830297154687 1.1284031536964518 0.0 0.12752832070210876 0.0 0.0 0.017773437658016332 0.0 9.214368169637359e-05 4.035534439050183 0.018620123980983116 HIEDTGS(ph)TPS(ph)IGENDLK ddPTM_A549_PD325901_60min_R1 2 HIEDTGSTPSIGENDLK 17 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 2 HIEDT(0.091)GS(0.784)T(0.134)PS(0.992)IGENDLK;HIEDT(0.044)GS(0.75)T(0.352)PS(0.854)IGENDLK 72.086 0.00030142 11642600.0 2574.3 2682.8 2540.1000000000004 3204.2 2737.2 3205.8 2989.8999999999996 2878.3999999999996 2783.2 2840.3 2886.6000000000004 True False 2835.641040900501 2908.88897128742 2712.486460862149 3402.116156733812 2544.948514827368 3179.6930276796015 3103.6822806360587 2820.9880539388814 2666.231782838712 2660.96297327137 2531.5664996650416 1.1201131952392689 1.1490470314219685 1.0714656167321877 1.343877854752761 1.0052860610867211 1.2560179746810187 1.2259927918333235 1.114325084611498 1.0531944482562432 1.05111320347439 1.0 11.30581466639229 -8.749944436314985 2.20684006665475 1.0215780475213534 1.1670179905458606 0.3084823805259441 0.08663957048806996 0.2249528631468358 2.1505085370360195 0.014816322997753007 0.016081379639238468 1.7785069378619382e-09 8.749944436314985 0.14543994302450725 HIEDTGSTPS(ph)IGENDLK ddPTM_A549_MK2206_60min_R1 2 HIEDTGSTPSIGENDLK 17 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 HIEDTGS(0.001)T(0.005)PS(0.995)IGENDLK;HIEDTGST(0.002)PS(0.997)IGENDLK 121.26 2.3983e-10 20249800.0 2845.5699999999997 2951.0 3237.8 3171.0 4108.0 3722.0 3293.5 3919.8999999999996 6138.799999999999 5176.9 4395.7 True False 3325.832648492952 3101.193295259889 3696.9687264337213 3947.895142351597 3503.7186418346932 4115.859569536356 3891.886318245474 4475.557829190279 4748.371601649209 4007.434694486799 3304.1263748517194 1.006569444137017 0.9385819255775477 1.118894469222483 1.1948378162529476 1.060406971265417 1.2456725629088763 1.1778866413425642 1.3545359109913375 1.4371035072356466 1.2128575725759405 1.0 11.690053152074762 -6.038256079658963 0.9026859304131349 1.2198347858016616 0.9373790582195936 0.3884833868449301 0.1145559803813753 1.0718473506826192 1.2246686415335506 0.026445021203671683 0.2276206661204676 9.156804043481009e-07 6.038256079658963 -0.28245572758206805 HIEDTGSTPS(ph)IGENDLK ddPTM_A549_PD325901_60min_R1 2 HIEDTGSTPSIGENDLK 17 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 HIEDTGSTPS(1)IGENDLK;HIEDTGS(0.004)T(0.029)PS(0.967)IGENDLK 112.5 9.854500000000001e-10 32636000.0 10457.2 11460.6 12683.8 12777.1 14685.3 14821.3 13060.3 14456.8 13198.1 13903.099999999999 13754.8 True False 11518.80724581623 12426.424982979192 13544.59894188548 13566.312448100494 13653.855189534701 14700.60024678636 13557.316863370379 14168.447782859792 12643.429754629069 13025.255893282108 12063.046798861184 0.9548837402258662 1.030123250798655 1.1228174082159876 1.1246174100378379 1.1318745104117227 1.2186473692677853 1.1238716958845143 1.1745331025489654 1.048112468221766 1.0797650138032924 1.0 13.55830671850021 -8.965011341976243 4.977640122767277 1.0204018710393326 1.1134319674274389 0.14828044932519824 0.06852189154872068 0.19341774049063537 10.433815184049221 0.012567260693308062 0.013015954441642327 1.0838986067014252e-09 8.965011341976243 0.09303009638810633 HIEPELAGRDS(ph)PIR ddPTM_A549_MK2206_60min_R1 4 HIEPELAGRDSPIR 14 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR 147.09 9.8151e-14 90733000.0 2548.71 2672.91 3275.1099999999997 2710.91 4182.7 3365.7200000000003 2913.68 3104.18 4639.9400000000005 4307.389999999999 3342.2200000000003 True False 2978.869938023126 2808.9497020783156 3739.5698454599833 3375.0830716973746 3567.4303707891877 3721.8782564158823 3443.057940715188 3544.2070211525497 3589.000998461626 3334.3476073877214 2512.254533420598 1.1857357200057277 1.1180991673856184 1.4885314348973693 1.3434478978139128 1.4200115168791831 1.4814893184204163 1.3705052154994983 1.4107674895214066 1.4285976801781177 1.3272331935442028 1.0 11.29476692544439 -10.751357163200291 0.9428348668997899 0.9943143531970065 1.3664098245188965 0.07725644966189338 0.14440644494687285 0.3340013123756517 0.5144455900664189 0.08576243266110821 0.020628356307563166 1.772730989649978e-11 10.751357163200291 0.37209547132189 HIEPELAGRDS(ph)PIR ddPTM_A549_PD325901_60min_R1 4 HIEPELAGRDSPIR 14 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR 142.84 1.5857e-13 85039000.0 7167.47 11213.220000000001 10054.329999999998 10025.7 12048.3 8924.99 10144.72 10454.490000000002 13093.600000000002 9966.74 11237.519999999999 True False 7895.106277987466 12158.197402199014 10736.677295397863 10644.96471898327 11202.068972378562 8852.307840511005 10530.782871003787 10245.966995561255 12543.321526220541 9337.438335465506 9855.37628050852 0.8010963816370988 1.233661410396364 1.0894233756079243 1.0801175334153765 1.1366454870458333 0.898221193037415 1.0685317913057315 1.0396322478143454 1.2727389771030972 0.9474461522014773 1.0 13.266695239407284 HIEPELAGRDS(ph)PIRAEMPGNLQHYGR ddPTM_A549_MK2206_60min_R1 6 HIEPELAGRDSPIRAEMPGNLQHYGR 26 2 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR 172.36 1.2571999999999999e-48 141777800.0 6043.629999999999 7483.040000000001 7897.419999999999 6626.4 12647.4 9733.099999999999 8898.11 9301.1 12867.0 11416.699999999999 10265.099999999999 True False 7063.646991432807 7863.894773351942 9017.392908614544 8249.868297470397 10786.984213909467 10763.050181691113 10514.781407998566 10619.559408424126 9952.645044376814 8837.65954075749 7715.9923676525705 0.9154554145291067 1.0191682934160764 1.1686627563834537 1.0691908317659788 1.3980034841832252 1.3949016106875112 1.3627257398645494 1.3763050690594325 1.289872328814226 1.1453691397891006 1.0 12.913636000994252 -5.598632940642812 1.4366775194406864 1.206550374697137 0.8807695420293903 0.3816244683543353 0.1335447541518547 0.8034490828891298 2.265288840816587 0.025273562292961214 0.3123381543100729 2.519805731040457e-06 5.598632940642812 -0.3257808326677468 HIEPELAGRDS(ph)PIRAEMPGNLQHYGR ddPTM_A549_PD325901_60min_R1 2 HIEPELAGRDSPIRAEMPGNLQHYGR 26 2 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR 225.71 9.356099999999997e-96 64873000.0 2738.8 3643.6 3594.3 3479.2 3815.3 3531.0 2784.09 3779.7 3802.3 3763.7000000000003 3321.1000000000004 True False 3016.840959802004 3950.658959215311 3838.2308122817285 3694.102282163498 3547.3264900704607 3502.24470669932 2890.040068462506 3704.310918382709 3642.5025538544287 3526.0593396829413 2912.625754187478 1.0357804999371085 1.3563908626212806 1.3177905904194898 1.2683065364139188 1.217913590501792 1.2024355348997886 0.9922455929353435 1.271811496227082 1.250590656426631 1.21061187988657 1.0 11.508104624910045 -10.873255864267712 0.7185142789642512 0.9707447311885911 1.2204779325368684 0.0 0.12181962324779622 0.8322637600298911 0.6117011399971151 0.13044454821976995 0.02016448900227446 1.3388876503652047e-11 10.873255864267712 0.24973320134827737 HIISATSLST(ph)SPTELGSR ddPTM_A549_MK2206_60min_R1 1 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;Q5JSZ5-5;A0A1W2PQP5 Q5JSZ5 PRRC2B Protein PRRC2B 1 HIISATSLS(0.006)T(0.496)S(0.496)PT(0.003)ELGSR 114.75 5.123e-10 5743500.0 928.28 1098.4 832.7 1151.6 1256.0 1022.2 950.93 1092.2 1874.8 1502.6 2031.5 True False 1084.9509697329656 1154.3038683542743 950.7893812160602 1433.7420516972882 1071.2440638131397 1130.3685255185553 1123.7016719627052 1247.0226947222181 1450.1607934404014 1163.161616398977 1527.0224834522994 0.7105009791867003 0.7559180567823853 0.6226426863516189 0.9389135177996054 0.7015247486017797 0.7402435378443236 0.7358776207552854 0.8166367609093375 0.9496656461546469 0.7617187232039282 1.0 10.576505588791834 -8.690534873244077 2.0505664550911344 0.9806418660162973 0.7445960834102915 0.26248625455323193 0.09751444328694091 0.1231653410130922 1.0192330966209158 0.012520358101706689 0.01385138171496203 2.039224906104684e-09 8.690534873244077 -0.23604578260600584 HIISATSLSTS(ph)PTELGSR ddPTM_A549_MK2206_60min_R1 1 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;Q5JSZ5-5;A0A1W2PQP5 Q5JSZ5 PRRC2B Protein PRRC2B 1 HIISAT(0.002)S(0.002)LS(0.015)T(0.305)S(0.657)PT(0.018)ELGS(0.001)R 87.06200000000001 2.4071000000000002e-06 4766500.0 832.69 1569.3 1289.8 1176.4 1624.9 1019.8 992.54 1007.6 1766.0 1729.7 1833.2 True False 973.2277146840861 1649.1706669777518 1472.713034577248 1464.6180528106022 1385.879362492015 1127.714559111547 1172.8716703541409 1150.4303856455836 1366.0038197225033 1338.9595686711777 1377.9658462538785 0.7062785462570726 1.1968153430371062 1.0687587348996697 1.0628841467967405 1.0057428972275693 0.818390791163176 0.8511616405752696 0.8348758343852497 0.9913190689276552 0.9716928560393985 1.0 10.428324415047696 -5.223879476379712 23.245379713306654 0.9843975786725383 0.7062768072013534 0.3488144675655064 0.10743854980011311 7240.871708681507 4481077.892432436 0.015129236662247986 4.688769651996906 5.972009963560919e-06 5.223879476379712 -0.27812077147118486 HIISATSLSTS(ph)PTELGSR ddPTM_A549_PD325901_60min_R1 2 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;Q5JSZ5-5;A0A1W2PQP5 Q5JSZ5 PRRC2B Protein PRRC2B 1 HIISATSLS(0.003)T(0.058)S(0.934)PT(0.005)ELGSR;HIISATS(0.003)LS(0.021)T(0.226)S(0.748)PT(0.001)ELGSR 155.11 4.8850000000000006e-23 18505900.0 2190.14 2333.42 2610.1000000000004 2960.3 2739.4 2667.4 2773.4 2684.8999999999996 3108.6000000000004 2688.7 2973.4 True False 2412.481400504147 2530.0654925382023 2787.2370818063437 3143.1510076709033 2546.993994416956 2645.6775787736515 2878.943254662712 2631.3475632366976 2977.9563524476966 2518.935023143586 2607.690649935575 0.9251409482040169 0.970232221602171 1.0688526577626087 1.2053389107901111 0.9767239816118071 1.0145672681071334 1.104020239031742 1.0090719784195672 1.1419898876890437 0.9659638972919653 1.0 11.348557017622593 -5.660667080973161 3.856613677652171 1.0667208308563498 0.9353127803325479 0.24443877905047728 0.07086507900056656 0.2008650303715105 5.441631232188349 0.009727032754382801 0.043429958625179926 2.1844037781797215e-06 5.660667080973161 -0.1314080505238019 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_A549_MK2206_60min_R1 4 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(0.999)EEEPCT(0.001)STAIAS(1)PEK 186.59 2.8108999999999996e-50 201941000.0 10444.2 13440.8 11925.599999999999 10148.2 16329.300000000001 14533.300000000001 11833.0 14146.3 16401.3 16183.3 14085.500000000002 True False 12206.925623825833 14124.879309701506 13616.829403903263 12634.509455570007 13927.281601292907 16071.204159576226 13982.902931167067 16151.581346226805 12686.431737494171 12527.481290210015 10587.681609976551 1.1529365987284226 1.3340861418038796 1.2861011414503067 1.1933216280006733 1.3154231600777946 1.5179153238261969 1.3206765603898847 1.5255068995470649 1.1982256555146136 1.1832128837729339 1.0 13.370099095795512 -9.541320810230806 1.1859411570153868 1.0435513336012645 1.326900260440115 0.33394053826870773 0.12070291037030283 0.23516538513176405 0.6830023871044799 0.030824002721736948 0.022938916818394165 2.875273685942937e-10 9.541320810230806 0.2833489268388505 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_A549_PD325901_60min_R1 8 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(0.982)EEEPCT(0.008)S(0.01)TAIAS(1)PEK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(0.987)EEEPCT(0.012)S(0.001)TAIAS(1)PEK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(0.994)EEEPCT(0.006)STAIAS(1)PEK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEK 213.52 5.5207e-74 389638000.0 26057.3 29627.8 32313.399999999998 28993.099999999995 35497.299999999996 28453.7 30138.9 32276.7 27674.5 31076.5 29246.0 True False 28702.6179136296 32124.63868477315 34506.38164025942 30783.93793889242 33004.092107036966 28221.98250099416 31285.852332138908 31632.915897918683 26511.437005666132 29114.32448645132 25648.927405668866 1.1190572400811511 1.252474934982 1.3453342938868038 1.2002037142531203 1.2867630519217141 1.1003182337658535 1.2197723451478202 1.2333036542856466 1.033627511449334 1.13510884981555 1.0 14.646610875600986 -8.78917875967025 5.616336216635505 1.0150122026076862 1.2228382002887985 0.464930991974847 0.07461515476873862 0.07320555478137449 6.38591575841737 0.011194630225620547 0.012053963136791922 1.6248798023637524e-09 8.78917875967025 0.20782599768111232 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_A549_MK2206_60min_R1 7 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(1)EEEPCT(0.013)S(0.021)T(0.061)AIAS(0.905)PEKK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(1)EEEPCTS(0.001)T(0.002)AIAS(0.997)PEKK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(1)EEEPCTS(0.001)T(0.003)AIAS(0.996)PEKK;HIKEEPLS(1)EEEPCTS(0.001)T(0.008)AIAS(0.991)PEKK 178.33 4.5695e-42 383449000.0 26636.199999999997 27350.379999999997 28846.199999999997 24459.999999999996 37744.6 32283.210000000003 28140.399999999998 30713.6 42345.09999999999 40386.9 31850.8 True False 31131.739367433554 28742.397519081736 32937.02491705859 30452.701098051122 32192.419339969285 35699.39785433957 33253.14642476242 35067.34685645516 32754.002461229567 31263.471240079783 23941.367322639657 1.3003325561107144 1.200532832220576 1.3757370025358733 1.2719700043720628 1.3446357890147398 1.491117753353259 1.3889409897369258 1.4647177992751672 1.368092390874285 1.305834826339101 1.0 14.547217928374755 -10.56584280672271 0.8613674446267182 0.9998250882367219 1.356357691067171 0.1645011223640972 0.11710970754815371 0.25976759571300406 0.34482427545878414 0.05760742063164359 0.01602335328386161 2.7174226644288257e-11 10.56584280672271 0.3565326028304492 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_A549_PD325901_60min_R1 5 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(1)EEEPCT(0.011)S(0.032)T(0.031)AIAS(0.927)PEKK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(1)EEEPCT(0.005)S(0.016)T(0.093)AIAS(0.886)PEKK;HIKEEPLS(0.998)EEEPCT(0.001)S(0.001)T(0.001)AIAS(0.999)PEKK 181.93 1.2163e-50 1015859800.0 28033.210000000003 32720.4 39335.5 32882.6 43097.9 32819.0 33912.9 35309.5 33687.9 36385.9 35631.5 True False 30879.12084224155 35477.86294025378 42005.043573577066 34913.683520197024 40070.852183683506 32551.73294510475 35203.47396735094 34605.22432273312 32272.114715827927 34088.48806434347 31249.051386688465 0.9881618632236466 1.135326077621886 1.3442021984536292 1.1172717881308112 1.282306195085108 1.041687075306587 1.1265453639449352 1.1074007941717656 1.032739020345919 1.090864731940777 1.0 14.931524774748416 -8.412671607495172 0.8277683616238042 1.0082262352512419 1.169392323982279 0.18090980305800808 0.09576882783513 0.4464184269623336 0.6103572779013787 0.020076886413983662 0.024935875721179973 3.866592395787619e-09 8.412671607495172 0.1611660887310371 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEKKK ddPTM_A549_PD325901_60min_R1 1 HIKEEPLSEEEPCTSTAIASPEKKK 25 3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(1)EEEPCT(0.002)S(0.007)T(0.022)AIAS(0.968)PEKKK 85.09700000000001 1.9073000000000001e-07 8633100.0 1009.1 966.47 1012.1 1032.5 1361.4 1073.9 1271.9 1137.1 1203.6 1164.7 1235.7 True False 1111.5430891398432 1047.9178187267594 1080.787192251715 1096.2751800223652 1265.7799605750326 1065.1545144504107 1320.3028505103864 1114.4196484623067 1153.016877631746 1091.1606432310548 1083.716733747693 1.0256767792963033 0.966966538481754 0.9972967645467213 1.011588310749104 1.167998907055473 0.9828717055672926 1.2183099230594463 1.028331125430201 1.0639467323203546 1.0068688701129669 1.0 10.081771993178325 -6.538404014462891 24.99699186463077 1.050975480068775 0.9954726102674608 0.15334677516480344 0.06960051636603476 387.5261889840516 623948.3995010619 0.009734027306303456 0.020267896612575817 2.8946495069474194e-07 6.538404014462891 -0.055502869801314136 HIKEEPLS(ph)EEEPCTSTAIASPEK ddPTM_A549_MK2206_60min_R1 2 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(0.999)EEEPCT(0.001)STAIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK 236.6 1.3399999999999998e-98 86163000.0 5920.9 6706.299999999999 6294.4 6181.6 9970.9 7916.1 6642.3 8387.8 9701.5 8530.8 7107.9 True False 6920.203167893217 7047.622025076719 7187.040568183464 7696.092277502573 8504.19381837136 8753.776447718099 7849.119930676162 9576.796336560172 7504.125740112042 6603.6863551020915 5342.812261939743 1.2952360720570766 1.319084721595296 1.345179320520269 1.4404571787645888 1.5917074007919298 1.6384211195435086 1.4690989587244991 1.7924635691921642 1.4045273111257741 1.2359944597238346 1.0 12.383383608667794 -10.175929759394316 0.8900783052968294 1.0292846877640458 1.4802689763252996 0.42010227569915193 0.15570699288523715 0.29193007043222563 0.4567291498935296 0.07136387072184149 0.030358089491532965 6.669146239091866e-11 10.175929759394316 0.45098428856125383 HIKEEPLS(ph)EEEPCTSTAIASPEK ddPTM_A549_PD325901_60min_R1 4 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(0.998)EEEPCT(0.002)STAIASPEK 246.76 1.5555999999999995e-99 651320000.0 35556.4 42232.4 50101.5 45715.5 51598.0 43999.8 49676.7 51758.6 39950.200000000004 43441.4 41799.7 True False 39166.05955276177 45791.47256262071 53501.689074794245 48539.24260756652 47973.934483436606 43641.48021688718 51567.174002633314 50726.23411916381 38271.23202456282 40698.50259024428 36658.601890129845 1.0684002535106787 1.2491330875046232 1.459457980289186 1.3240887569319844 1.3086678708375226 1.190484032852258 1.4066868713975023 1.383747101736076 1.0439904974899539 1.110203349059042 1.0 15.161864144024097 -8.80887467417983 7.75125289148648 1.0201739508333945 1.3035818009270812 0.5171791647175468 0.10525913858118702 0.10999063371360794 15.405565331038785 0.017720895587948364 0.018882303410926806 1.5528350521451925e-09 8.80887467417983 0.28340785009368674 HIKEEPLS(ph)EEEPCTSTAIASPEKK ddPTM_A549_MK2206_60min_R1 4 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(1)EEEPCTSTAIASPEKK;HIKEEPLS(1)EEEPCTSTAIASPEKK;HIKEEPLS(1)EEEPCTSTAIASPEKK;HIKEEPLS(1)EEEPCTSTAIASPEKK 205.07 1.7750999999999995e-62 107066000.0 7449.4 9076.5 7838.3 7067.6 10792.9 9290.4 8209.199999999999 8783.699999999999 12389.2 11878.7 11464.400000000001 True False 8706.676599656092 9538.45508113399 8949.888803633778 8799.162317276623 9205.278707268173 10273.503961531595 9700.70537839403 10028.816373953068 9583.065981487003 9195.293419884558 8617.47307865643 1.0103514708065173 1.10687378934303 1.0385746171694654 1.021083818534948 1.068210903967615 1.1921712859163767 1.1257018490049624 1.163776931173968 1.112050585364999 1.0670521782840563 1.0 13.073049171222484 -5.239663247357529 22.00653773536171 1.074618896398337 1.0103511279649628 0.08655545268139275 0.05772205447005084 2284.176395823876 2308153.541141821 0.00945322403787185 0.4785241993767256 5.758863074293418e-06 5.239663247357529 -0.06426776843337412 HIKEEPLS(ph)EEEPCTSTAIASPEKK ddPTM_A549_PD325901_60min_R1 4 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(1)EEEPCTSTAIASPEKK;HIKEEPLS(0.999)EEEPCT(0.001)STAIASPEKK;HIKEEPLS(1)EEEPCTSTAIASPEKK;HIKEEPLS(1)EEEPCTSTAIASPEKK 185.5 5.626699999999999e-51 179728000.0 8653.900000000001 9803.3 11918.5 10355.0 14148.3 10937.1 12321.0 12788.100000000002 11348.300000000001 11689.8 10728.400000000001 True False 9532.437557335528 10629.458495684345 12727.361081762729 10994.604832088704 13154.572216985263 10848.03188378395 12789.882397309906 12533.031313429623 10871.370415776293 10951.704033006257 9408.874812930935 1.0131325739646122 1.1297268490676398 1.35269746221632 1.1685355635700931 1.398102587028418 1.1529574045214346 1.3593423923264807 1.332043582533913 1.1554378851800005 1.1639759536342178 1.0 13.19980648913935 -9.669245576120836 1.0162804907454834 1.0272987914158005 1.2394156256682949 0.15594739458332585 0.12127328875615613 0.34955624756829307 0.7486522486688866 0.03436815597582224 0.022649094451465995 2.1416792249074462e-10 9.669245576120836 0.2121168342524944 HIKEEPLSEEEPCTSTAIAS(ph)PEKK ddPTM_A549_MK2206_60min_R1 1 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLSEEEPCT(0.007)S(0.029)T(0.163)AIAS(0.802)PEKK 97.04700000000001 1.8275e-08 4454400.0 960.48 1175.2 1289.0 1027.1 1869.0 1225.9 1488.2 1384.8 1900.7 1947.7 1467.8 True False 1122.5855425185491 1235.0126603149513 1471.7995825477383 1278.7395461082717 1594.0725758493293 1355.6239243134396 1758.586676427179 1581.0996407721366 1470.1944847942025 1507.7132172636025 1103.3047507808442 1.0174754905424448 1.1193758201810453 1.3339918834810587 1.1590084654337496 1.4448161985354935 1.2286939971517579 1.5939264969017588 1.4330579467306215 1.3325370744154765 1.3665428488335116 1.0 10.107615626555724 -10.628483484460862 0.9921427202132793 1.0066229677384 1.3015245600632752 0.0 0.18769661487880593 0.4929093447515342 0.892340513181812 0.0970135791220162 0.028657653645956724 2.3524289508775932e-11 10.628483484460862 0.29490159232487523 HIKEEPLSEEEPCTSTAIAS(ph)PEKK ddPTM_A549_PD325901_60min_R1 1 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLSEEEPCT(0.138)S(0.138)T(0.138)AIAS(0.585)PEKK 48.305 0.0021099 14296000.0 1022.6 1119.3 905.49 1062.3 1075.7 1229.2 869.29 1373.1 709.23 1155.1 904.95 True False 1126.4135992016675 1213.6273391836921 966.9419965537055 1127.9158583416552 1000.1465429635398 1219.1898027399614 902.3713066437405 1345.712443323889 679.4235295137619 1082.1667888694 793.6468869506962 1.419288121357734 1.529177974661528 1.218352912929368 1.4211809771915918 1.2601908473505699 1.536186713242537 1.1369934431555309 1.6956060251106218 0.8560778611810642 1.3635368659067488 1.0 9.632353449336577 -8.780325116324255 24.999333167338804 0.9320367153432788 1.3917671533455516 0.2838391148725665 0.20057991136861283 95.29188162314404 126138.77464898907 0.02434524314493837 0.02593810932816807 1.6583449923109065e-09 8.780325116324255 0.45973043800227276 HILANFK ddPTM_A549_MK2206_60min_R1 2 HILANFK 7 0 J3KPG2;E9PJF7;Q5W0H4;A0A0B4J2C3;P13693-2;P13693;Q56UQ5;H0YCX0 J3KPG2 TPT1 Translationally-controlled tumor protein;TPT1-like protein 0 ; 95.95700000000001 0.012715 5006100.0 1404.6599999999999 1593.1 1697.51 1537.9 2220.2 1922.87 2042.7 1926.25 2501.6000000000004 2436.0 2102.52 False True 1641.732267360181 1674.1819853197321 1938.2424432665698 1914.6855690389543 1893.6115210811547 2126.3468271021957 2413.832148862923 2199.301836393218 1934.9915942343232 1885.7059081245238 1580.406257400014 1.0388039528906046 1.0593364696454646 1.2264203803237566 1.211514798852338 1.198180222467865 1.3454431840837742 1.5273491468162177 1.3916053711476517 1.2243634098346654 1.1931779561710731 1.0 10.626079748253114 -10.259510493363253 0.9883026301268995 1.018246077552385 1.249704263129222 0.09838734505409674 0.14257922661061317 0.4886099333213747 0.939602756767341 0.06461088531858845 0.02766767634728573 5.501606274450739e-11 10.259510493363253 0.23145818557683695 HILANFK ddPTM_A549_PD325901_60min_R1 2 HILANFK 7 0 J3KPG2;E9PJF7;Q5W0H4;A0A0B4J2C3;P13693-2;P13693;Q56UQ5;H0YCX0 J3KPG2 TPT1 Translationally-controlled tumor protein;TPT1-like protein 0 ; 106.29 0.010287000000000001 10514300.0 1535.2 1864.3600000000001 2168.96 2276.7 3448.3 2549.8 2257.21 2447.2 3265.8999999999996 2592.3 1838.1799999999998 False True 1691.052373845492 2021.4761601719883 2316.158668616024 2417.326588239146 3206.103303989194 2529.0352741834954 2343.1093617427064 2398.3886762087377 3128.6455804731813 2428.6217355953136 1612.0955131830826 1.0489777807932168 1.2539431712582485 1.4367378667550341 1.4994934037538103 1.988779993350855 1.5687874902585115 1.4534556684648523 1.487746015416369 1.94073214328081 1.5064999038425457 1.0 10.654721507630587 -5.569169906955691 1.9726241497551031 1.5065801701608872 1.0340462534187802 0.27739111122786386 0.24970857830892884 0.6881543204290387 4.280893442658448 0.050411000822427235 0.4682803655313949 2.6966842151601383e-06 5.569169906955691 -0.472533916742107 HIMDRT(ph)PEK ddPTM_A549_MK2206_60min_R1 3 HIMDRTPEK 9 1 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 HIMDRT(1)PEK;HIMDRT(1)PEK;HIMDRT(1)PEK 76.32600000000001 0.0011258 16095500.0 3181.26 3191.08 3108.62 2976.74 4219.4 4089.6 3621.51 4302.5 5230.0 5113.4 4112.84 True False 3718.1789136604207 3353.492341795301 3549.4690599686155 3706.041433630934 3598.7318494053825 4522.358757543225 4279.491489415265 4912.392550853639 4045.413350593825 3958.2793885894666 3091.508319390575 1.202707070312326 1.0847431076803218 1.1481350503589516 1.1987809996776917 1.16406992238494 1.4628324721554402 1.3842729979322443 1.5889954169109313 1.308556514378487 1.2803715790646029 1.0 11.594095172624112 -4.0656369299063435 16.29698197820096 1.2101390977434912 1.175199637820999 0.0 0.17012320763264863 0.0 0.0 0.026448293143357126 0.0 8.597319568890708e-05 4.0656369299063435 -0.034939459922492144 HIMDRT(ph)PEK ddPTM_A549_PD325901_60min_R1 2 HIMDRTPEK 9 1 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 HIMDRT(1)PEK;HIMDRT(1)PEK 69.352 0.0022768000000000003 10495000.0 3732.1000000000004 4041.6 3964.5 4395.5 4757.1 4538.5 4315.8 4505.4 4632.0 4773.2 4656.9 True False 4110.980044573191 4382.199815996432 4233.554810475175 4667.000052095211 4422.977707104078 4501.539960734881 4480.0401306963795 4415.536262582075 4437.3331482138965 4471.8193374005905 4084.13082252135 1.00657403575414 1.0729822345139934 1.0365864842354824 1.142715611938705 1.0829667068239357 1.1022026855535059 1.0969384491779364 1.0811446680976127 1.0864816385765272 1.094925586795944 1.0 11.995813363899337 -10.645265442461021 0.8305971024611702 0.9979388655081862 1.080839355939607 0.0 0.043202160193263436 0.4812093724177782 0.5688031442658347 0.025171575029311697 0.006130141057297622 2.2632605711803763e-11 10.645265442461021 0.08290049043142078 HIS(ph)LTLPATFR ddPTM_A549_MK2206_60min_R1 2 HISLTLPATFR 11 0 Q9H7P6 Q9H7P6 MVB12B Multivesicular body subunit 12B 1 HIS(0.982)LT(0.018)LPATFR;HIS(0.99)LT(0.01)LPATFR 60.157 0.0026021 3145700.0 187.57 106.74 392.13 193.14 407.57 360.29 388.71 304.81 746.32 471.54 625.15 True False 219.22723035378598 112.17261007659799 447.7399304146191 240.4593086703841 347.6169929047141 398.4156486588539 459.33357545626217 348.0177509414752 577.2797116281423 365.0187865012469 469.90800173773306 0.46653223512491276 0.2387118535155403 0.9528246566537795 0.5117157140996935 0.7397554236557298 0.8478588302082569 0.9774968158823294 0.7406082672661366 1.228495172445129 0.7767877651612595 1.0 8.876234524377038 -6.814304144177387 0.4850438150616802 1.1034805963769543 0.3417297654467776 0.4148528832554078 0.2048090907397497 0.6863935708602393 0.24771823328513226 0.04442333578792513 0.23296152863453085 1.5335426393697518e-07 6.814304144177387 -0.7617508309301767 HIS(ph)LTLPATFR ddPTM_A549_PD325901_60min_R1 3 HISLTLPATFR 11 0 Q9H7P6 Q9H7P6 MVB12B Multivesicular body subunit 12B 1 HIS(0.892)LT(0.107)LPATFR;HIS(0.974)LT(0.026)LPATFR;HIS(0.99)LT(0.01)LPATFR 62.891000000000005 0.0021585999999999997 4936500.0 749.64 364.79 394.18 554.22 703.4399999999999 600.59 614.245 473.47 709.84 619.6600000000001 596.12 True False 825.7429009441995 395.5321335306165 420.93142519689843 588.4529106750556 654.0328011362578 595.69899416498 637.6204296027614 464.0262694199704 680.0078933350939 580.5345618481632 522.8010191160272 1.5794592411858694 0.7565634324879434 0.8051465276571688 1.1255772065441556 1.2510166912874856 1.1394373239214637 1.2196235399098407 0.887577209020297 1.3007011625281035 1.1104311977619212 1.0 9.030118143211448 -6.485362750114349 24.63710622932594 1.1394225863012768 1.0092328873095038 0.017283123341208295 0.22547982354870988 1121.6306249976367 736584.2590043586 0.030920681798040663 0.07183535144091682 3.2706739346129033e-07 6.485362750114349 -0.13018969899177302 HIVNHDDVFEESEELS(ph)SDEEMK ddPTM_A549_MK2206_60min_R1 2 HIVNHDDVFEESEELSSDEEMK 22 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 HIVNHDDVFEESEELS(0.5)S(0.5)DEEMK;HIVNHDDVFEES(0.001)EELS(0.499)S(0.499)DEEMK 81.665 5.6261e-05 6590200.0 1201.9 1436.1799999999998 1454.96 1717.6599999999999 1871.73 1340.38 1277.19 1716.77 2386.3999999999996 1745.92 2066.87 True False 1404.7513363662395 1509.275427579243 1661.2952060695557 2138.486777108687 1596.4009964657373 1482.218121927766 1509.238890784861 1960.1274048876246 1845.8842102977248 1351.5154594058986 1553.6091362899583 0.9041858106735948 0.9714640525244432 1.0693134890006848 1.3764638268125953 1.0275435173340746 0.9540482784925718 0.9714405351586345 1.261660580581058 1.1881265159818277 0.8699198709872018 1.0 10.60140787459559 HIVNHDDVFEESEELS(ph)SDEEMK ddPTM_A549_PD325901_60min_R1 1 HIVNHDDVFEESEELSSDEEMK 22 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 HIVNHDDVFEES(0.002)EELS(0.499)S(0.499)DEEMK 73.405 0.00014442 6454000.0 1241.5 1672.7 1266.8 1618.3 2064.7 1953.2 1325.6 1387.6 1878.5 1455.0 1416.4 True False 1367.5361660560047 1813.6642993411601 1352.7726658872373 1718.2587155740364 1919.6825948283163 1937.2937867813953 1376.0464333961522 1359.9232294488586 1799.5531776597168 1363.131051688147 1242.1917792993715 1.100905825368874 1.4600517646028168 1.0890207844156208 1.3832475340830053 1.545399532358093 1.5595770468502692 1.1077568345946374 1.0947771931125567 1.448691907037665 1.0973595819938433 1.0 10.27867220997983 -10.954989404587778 1.1060617000156776 0.9920545885715336 1.3245722485871305 0.2323357645563846 0.17937026682493157 0.5372696004298547 1.1207379466112046 0.14330213923151122 0.030163165529692396 1.1092018759510418e-11 10.954989404587778 0.3325176600155969 HIVSNDSSDS(ph)DDESHEPK ddPTM_A549_MK2206_60min_R1 4 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVSNDS(0.001)S(0.008)DS(0.99)DDES(0.001)HEPK;HIVSNDS(0.021)S(0.072)DS(0.901)DDES(0.006)HEPK;HIVSNDSSDS(0.999)DDESHEPK;HIVSNDSS(0.022)DS(0.976)DDES(0.002)HEPK 177.5 2.8958999999999997e-31 119817000.0 7189.6 8228.7 8342.2 8049.299999999999 9439.0 8655.5 8277.8 9591.4 13561.4 12930.2 11654.5 True False 8403.028711156257 8647.505682380572 9525.24940072129 10021.378861346808 8050.535603767695 9571.419264944107 9781.769110421259 10951.010322430584 10489.764553105759 10009.258839586097 8760.36600216333 0.9592097760620014 0.9871169401192955 1.0873118084757047 1.1439452254474387 0.9189725180180434 1.0925821207219528 1.1165936569323358 1.2500631046381265 1.197411677835762 1.1425617191238766 1.0 13.096775430570212 -7.499804220677005 24.04083918811604 1.111143909447546 1.025979866249869 0.30225362589465643 0.08268615111633171 752.5279649050734 784042.1754662248 0.015290182627602731 0.0243276854056999 3.1637035317205886e-08 7.499804220677005 -0.08516404319767701 HIVSNDSSDS(ph)DDESHEPK ddPTM_A549_PD325901_60min_R1 2 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVSNDSS(0.004)DS(0.996)DDESHEPK;HIVSNDSS(0.001)DS(0.999)DDESHEPK 249.59 6.659799999999999e-87 100516000.0 6434.6 6654.9 8072.700000000001 9025.3 9794.4 8980.0 8872.2 9064.5 9672.9 9502.1 9320.2 True False 7087.8358550978455 7215.731778373579 8620.561967088648 9582.772283056509 9106.47513284568 8906.869857309513 9209.836426054126 8883.701436537312 9266.381651415848 8902.135784361466 8173.874485615649 0.8671329450398327 0.8827798605265831 1.0546481943488462 1.1723659691521118 1.1140952982421273 1.0896753887013786 1.1267406224871153 1.0868409408745894 1.133658422052209 1.0890962174703573 1.0 12.996804374806793 -5.779459801127534 4.446536752985956 1.0829148601323562 0.8700327040762897 0.7944909724146013 0.043211624164952396 0.08396067766468844 3.8963226649479514 0.008173680239228953 0.03011340199007621 1.6616524754026631e-06 5.779459801127534 -0.21288215605606642 HKAEEVEDETVELDVS(ph)DEEMAR ddPTM_A549_MK2206_60min_R1 8 HKAEEVEDETVELDVSDEEMAR 22 1 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR 165.37 6.0828e-34 192995400.0 10856.929999999998 13729.590000000002 12313.33 9510.0 12911.570000000002 11400.34 11725.16 11575.460000000001 16163.61 18270.460000000003 16519.989999999998 True False 12689.314357546138 14428.367487179674 14059.54534815558 11839.950426920119 11012.295156853354 12606.716411866775 13855.469799070637 13216.316903359508 12502.578142981236 14143.150396614448 12417.620554470654 1.0218796992454136 1.1619269105452816 1.1322253958785842 0.9534798051674594 0.8868281252875497 1.0152280267033962 1.115791043726354 1.064319596929647 1.0068416962926119 1.138958171138718 1.0 13.600101132565205 -6.2507501941508705 24.513163440590002 1.0055760197776544 1.1110023010538346 0.16902553192050684 0.07466072969952155 481.45702658691 1104106.3245089995 0.008962931412406444 0.023447384816274987 5.613707832234293e-07 6.2507501941508705 0.10542628127618014 HKAEEVEDETVELDVS(ph)DEEMAR ddPTM_A549_PD325901_60min_R1 8 HKAEEVEDETVELDVSDEEMAR 22 1 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR;HKAEEVEDETVELDVS(1)DEEMAR 205.33 1.5638999999999997e-61 433202000.0 32614.2 36561.99999999999 40972.2 40941.1 42901.0 42098.6 32713.4 36164.100000000006 44681.700000000004 41724.7 42499.799999999996 True False 35925.16957469492 39643.20805435014 43752.81987785369 43469.93876301562 39887.7817604154 41755.76295934633 33958.32633845937 35442.7786553124 42803.8835337973 39090.19532121813 37272.59402842939 0.9638494585939811 1.0636020670874848 1.1738603394354994 1.166270818979201 1.070163824122123 1.120280572033635 0.9110803050777176 0.9509072169293795 1.14840098065482 1.0487650870610825 1.0 15.185827608106955 HKDGGYS(ph)EEEDVK ddPTM_A549_MK2206_60min_R1 1 HKDGGYSEEEDVK 13 1 Q8WYP3-2;Q8WYP3;E7EPJ1 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 HKDGGYS(1)EEEDVK 115.31 5.1896e-06 8110700.0 3070.4 3376.6 3758.0 3305.9 4806.4 3924.2 4014.3 3811.2 5662.6 5484.2 4471.0 True False 3588.6084559271967 3548.454517375313 4290.940908622494 4115.84564840749 4099.384926999577 4339.456239326858 4743.646348059153 4351.44927131049 4380.030141314071 4245.3154110576825 3360.7273066774424 1.0678070930649375 1.055859102380867 1.2767893723768682 1.2246889654598576 1.219791001446173 1.291225334083124 1.4114939759122924 1.2947939163836883 1.303298286835523 1.2632132939267784 1.0 11.714557770103387 -3.9785283707629144 16.039102557811272 1.1876670163886716 1.1849533094203102 0.0 0.12383304095406066 0.0 0.0 0.020071304526232892 0.0 0.00010506828156173786 3.9785283707629144 -0.0027137069683613735 HKGYS(ph)PPESR ddPTM_A549_MK2206_60min_R1 1 HKGYSPPESR 10 1 Q14669-3;G5E9G6;C9JLD7 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HKGY(0.335)S(0.664)PPESR 53.251999999999995 0.0090866 3328700.0 325.25 344.0 394.54 439.74 601.91 174.34 224.03 331.7 595.76 716.56 565.76 True False 380.1442484009646 361.50813065720166 450.49170465351773 547.4763197406786 513.3698363453553 192.78854308247412 264.73335110870903 378.7194907886465 460.82131123322705 554.6885983274666 425.26617781834716 0.8938972065710421 0.8500749636657449 1.0593170304880104 1.2873732930027029 1.2071729733575045 0.4533361765835606 0.6225121227999235 0.8905469339967518 1.0836067744613052 1.3043327385522823 1.0 8.732222309177452 -5.747198958025773 24.186948412083613 0.9921106519834739 0.8719860116156835 0.03216289343712908 0.24900189187419255 520.1362849584597 883412.0470528804 0.0336194999242529 0.128837903645295 1.7897857335191698e-06 5.747198958025773 -0.12012464036779047 HKGYS(ph)PPESR ddPTM_A549_PD325901_60min_R1 4 HKGYSPPESR 10 1 Q14669-3;G5E9G6;C9JLD7 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HKGY(0.158)S(0.842)PPESR;HKGY(0.006)S(0.681)PPES(0.313)R;HKGY(0.094)S(0.906)PPESR;HKGYS(0.996)PPES(0.003)R 71.176 0.0011312000000000002 42701100.0 8250.24 8594.140000000001 11271.21 11623.11 12189.07 13876.52 12336.86 13951.9 14043.490000000002 11599.230000000001 12444.189999999999 True False 9087.79829129432 9318.398338936953 12036.142089891759 12341.043106701938 11332.951773208702 13763.51422186554 12806.34595828883 13673.618409446179 13453.290952851996 10866.852638263024 10913.633520219882 0.8327014348115315 0.8538309740447663 1.1028537899492579 1.13079141642767 1.0384215075769168 1.2611303280768622 1.173426424349167 1.2528933085496066 1.232705031548553 0.9957135373961215 1.0 13.413843883490982 -5.772323658380477 4.198471137344461 1.1331786467340417 0.8347775905809672 0.6100926087546177 0.08938211727067479 0.11094584819542967 4.445821728504473 0.01437227444279475 0.05456068477362876 1.6891815982305721e-06 5.772323658380477 -0.29840105615307444 HKLTVS(ph)DGES(ph)GEEK ddPTM_A549_PD325901_60min_R1 2 HKLTVSDGESGEEK 14 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 2 HKLT(0.05)VS(0.95)DGES(0.999)GEEK;HKLT(0.095)VS(0.905)DGES(1)GEEK 75.589 0.00024616 23467000.0 5080.8 5640.3 6070.5 6972.599999999999 6721.7 7153.5 6359.299999999999 6851.5 8383.3 7106.5 6954.200000000001 True False 5596.5990757127265 6115.627875634571 6482.480634881965 7403.281666076455 6249.590980606142 7095.244267735364 6601.306641442482 6714.841457602231 8030.97905471105 6657.794377197122 6098.877486305911 0.9176441219353934 1.0027464708655438 1.0628973363438396 1.2138761079722264 1.0247116776224208 1.1633688795465462 1.0823805948331802 1.100996285411434 1.3167962584497517 1.0916425837617125 1.0 12.574328020130709 -5.688367045824242 1.6909040838119205 1.1401650981478162 0.9136613386241982 0.35426087668931316 0.08488669710753308 0.49289107440404495 2.2966166388861358 0.016678949871048673 0.13861279566110699 2.049429362757913e-06 5.688367045824242 -0.226503759523618 HKMS(ph)PPPSGFGER ddPTM_A549_MK2206_60min_R1 10 HKMSPPPSGFGER 13 1 A0A087WZ13;Q8IY67-2;E9PAU2;K7EQG2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 HKMS(0.999)PPPS(0.001)GFGER;HKMS(1)PPPSGFGER;HKMS(0.999)PPPS(0.001)GFGER;HKMS(0.999)PPPS(0.001)GFGER;HKMS(0.993)PPPS(0.007)GFGER;HKMS(0.996)PPPS(0.004)GFGER;HKMS(0.983)PPPS(0.017)GFGER;HKMS(1)PPPSGFGER;HKMS(0.997)PPPS(0.003)GFGER;HKMS(1)PPPSGFGER 112.17 1.5216e-05 318356000.0 24725.460000000003 31617.210000000006 34225.5 29908.100000000002 48174.6 37645.0 33617.8 32476.899999999998 51452.6 47240.7 39765.799999999996 True False 28898.513168541453 33226.39094097727 39079.1905449865 37235.58584262563 41088.18015650671 41628.56891327138 39725.71910414841 37080.60003133494 39798.66825291852 36568.99305990896 29890.8543797526 0.9668011760853735 1.111590539328447 1.307396237273762 1.245718351491759 1.374607083307024 1.3926858156811217 1.3290258819452725 1.2405332935699729 1.3314663992969453 1.2234174572366852 1.0 14.867416514163848 -10.825308984282515 1.0196004962655556 0.9967183134663059 1.2658347607477938 0.06095087988394243 0.13391239186695814 0.46379103850968223 0.8386576130591938 0.0915120827206135 0.0215053211961903 1.4951715189717853e-11 10.825308984282515 0.26911644728148787 HKMS(ph)PPPSGFGER ddPTM_A549_PD325901_60min_R1 12 HKMSPPPSGFGER 13 1 A0A087WZ13;Q8IY67-2;E9PAU2;K7EQG2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 HKMS(1)PPPSGFGER;HKMS(1)PPPSGFGER;HKMS(0.999)PPPS(0.001)GFGER;HKMS(0.998)PPPS(0.002)GFGER;HKMS(0.996)PPPS(0.004)GFGER;HKMS(0.999)PPPS(0.001)GFGER;HKMS(0.998)PPPS(0.002)GFGER;HKMS(0.982)PPPS(0.018)GFGER;HKMS(1)PPPSGFGER;HKMS(0.999)PPPS(0.001)GFGER;HKMS(0.998)PPPS(0.002)GFGER;HKMS(0.999)PPPS(0.001)GFGER 91.355 5.5638999999999994e-05 547559000.0 42841.7 47832.50000000001 58117.8 56408.5 68904.9 72456.6 65683.3 69457.0 72496.79999999997 57856.4 55307.9 True False 47190.95784560736 51863.51264317336 62062.023398722136 59892.72493200155 64065.25753300034 71866.53747250924 68182.91392478085 68071.62564703776 69450.011610413 54203.33703016499 48505.37892566485 0.9729015398050624 1.0692321922204728 1.2794874459971342 1.2347646025771277 1.3207866622623692 1.4816199577091373 1.405677379188648 1.40338302998021 1.4318002074954632 1.1174706440956237 1.0 15.565857121057286 -5.638533537925218 3.2213897651526318 1.2669791215008668 0.9862042529057269 0.364247179109777 0.1381034505126894 0.2922974419874863 5.713112587556348 0.026151006921015817 0.13204756780382415 2.2986161942415026e-06 5.638533537925218 -0.2807748685951399 HKS(ph)DNETNLQQQVVWGNR ddPTM_A549_MK2206_60min_R1 3 HKSDNETNLQQQVVWGNR 18 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 HKS(1)DNETNLQQQVVWGNR;HKS(0.5)DNET(0.5)NLQQQVVWGNR;HKS(1)DNETNLQQQVVWGNR 169.05 9.1847e-31 33398200.0 4011.68 4185.889999999999 3895.25 3517.9 6940.299999999999 5647.17 5604.0 4558.73 7360.200000000001 6756.200000000001 7200.1 True False 4688.753507840676 4398.933921618235 4447.65502243528 4379.7856579245345 5919.391063759816 6244.7497811119365 6622.174260649048 5204.943938025105 5693.126451824218 5229.969727615315 5412.116457349196 0.8663437944824239 0.8127936559171515 0.8217958829019175 0.8092556197635319 1.0937294329137695 1.1538461580278996 1.2235831052113995 0.9617206094959823 1.051922385020639 0.9663446396304829 1.0 12.401977168069758 -6.757150138405658 24.9951148855251 1.0494690559001234 0.8260825606701031 0.6938693117215153 0.07527587934712744 52.02503970733162 303166.55370001047 0.011278842926743696 0.022847058984317024 1.749241859882194e-07 6.757150138405658 -0.2233864952300203 HKS(ph)DNETNLQQQVVWGNR ddPTM_A549_PD325901_60min_R1 2 HKSDNETNLQQQVVWGNR 18 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 HKS(0.999)DNET(0.001)NLQQQVVWGNR;HKS(0.998)DNET(0.002)NLQQQVVWGNR 203.71 1.6445e-49 15831900.0 7490.799999999999 7711.7 7906.700000000001 8389.8 7808.700000000001 9234.4 7570.9 8019.200000000001 11293.6 11141.9 10396.599999999999 True False 8251.260501564499 8361.592023213503 8443.29620884955 8908.018891381727 7260.243850552568 9159.198108055556 7859.014742455443 7859.250765059302 10818.969266551914 10438.398532511448 9117.884109477433 0.9049534302577792 0.9170539922219658 0.9260148634783926 0.976983122885104 0.7962641072621255 1.0045310949428696 0.8619340461112597 0.8619599317883558 1.1865657795876476 1.1448268487709148 1.0 13.15448335697677 -8.750984391986165 24.999986216111566 1.0881005097022205 0.9077288225840712 0.6330248468469762 0.0686805882437818 121.92270279030627 291541.4572418627 0.01366033428662155 0.015407174597050483 1.774253244241357e-09 8.750984391986165 -0.18037168711814933 HKS(ph)HDNVYSLGGLEGR ddPTM_A549_PD325901_60min_R1 2 HKSHDNVYSLGGLEGR 16 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 HKS(1)HDNVYSLGGLEGR;HKS(1)HDNVYSLGGLEGR 113.51 9.0452e-08 28328000.0 3257.31 3575.4 3648.2 3999.1 4852.5 4935.5 4160.9 3560.1 5591.6 5243.4 5257.2 True False 3587.9897132951164 3876.711505867393 3895.7887904087606 4246.11532438493 4511.6771402162085 4895.30692435981 4319.245326431846 3489.0910126555796 5356.604497312786 4912.330829155756 4610.5977281365795 0.7782048933480127 0.8408262300155616 0.8449639331218088 0.9209468218128501 0.9785449536582428 1.06175103815407 0.9368081062620731 0.7567545941740035 1.1618026150109855 1.0654433804055001 1.0 12.170738081633019 -5.911006017756686 0.37422340883522 1.062912727180689 0.6595135664521793 0.3663119209651562 0.09715049398165385 2.8603770262497963 0.37487542743644015 0.03273923246978088 0.4769005061538443 1.2274222233911578e-06 5.911006017756686 -0.4033991607285098 HKT(ph)DPSAAGR ddPTM_A549_MK2206_60min_R1 2 HKTDPSAAGR 10 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 EP400 E1A-binding protein p400 1 HKT(0.994)DPS(0.006)AAGR;HKT(1)DPSAAGR 56.951 0.0079657 22767000.0 627.8 700.69 517.6 490.78999999999996 865.8199999999999 664.6899999999999 520.6 651.4300000000001 778.28 923.05 467.37 True False 733.7572917636444 736.3521281110311 591.00346309287 611.0335720324001 738.4590249448183 735.0270546144874 615.18628124445 743.7721974207059 602.0008226577746 714.532363913933 351.3091302442043 2.0886371249548517 2.0960233159871855 1.6822889364761109 1.7393045595133108 2.1020205891930446 2.092251499707823 1.7511252292726287 2.1171445128787005 1.7135928754237268 2.033913446591162 1.0 8.456597261316128 -10.088354636996378 0.5789835838750972 0.9706134328907486 1.9661387895272848 0.0 0.34210141169020936 0.2680268000817728 0.17055519706164676 0.12676157548874623 0.04135897861564497 8.159158371827926e-11 10.088354636996378 0.9955253566365362 HKT(ph)DPSAAGR ddPTM_A549_PD325901_60min_R1 4 HKTDPSAAGR 10 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 EP400 E1A-binding protein p400 1 HKT(0.993)DPS(0.007)AAGR;HKT(1)DPSAAGR;HKT(0.988)DPS(0.012)AAGR;HKT(1)DPSAAGR 117.79 3.9835999999999996e-05 61468800.0 7462.0599999999995 9306.699999999999 9789.26 10191.480000000001 13299.5 10845.0 10155.1 9691.56 11318.9 12383.099999999999 10027.999999999998 True False 8219.60283792177 10091.008270866487 10453.618051202473 10820.984573069567 12365.389000784238 10756.681915648292 10541.557887583942 9498.254232918262 10843.205995535038 11601.228952686937 8794.61957272952 0.934617213393656 1.1474070239668839 1.1886378898772607 1.230409625292199 1.406017497235129 1.2230980347350968 1.1986371667822169 1.0800074016129797 1.2329363317951585 1.31912800283712 1.0 13.102405457310214 -10.86422471119407 0.8555694288309292 0.9862526427033906 1.1919146903670907 0.0 0.14423489741944667 0.7698711581463841 0.8842229635471442 0.10905208072308839 0.02023302812367745 1.3670213229872846e-11 10.86422471119407 0.2056620476637001 HKT(ph)ESVR ddPTM_A549_MK2206_60min_R1 1 HKTESVR 7 1 Q5T011-5;Q5T011 Q5T011-5 SZT2 Protein SZT2 1 HKT(0.998)ES(0.002)VR 55.567 0.015729 6777300.0 1685.2 1484.9 1623.6 1316.6 1775.8 2038.0 1900.6 2216.1 1881.1 2653.6 2168.5 True False 1969.620560815696 1560.4750674792988 1853.8508938902298 1639.1670591044203 1514.582172388036 2253.659807285088 2245.9144182351165 2530.238961521615 1455.0338534994344 2054.14991699476 1630.0016024446513 1.208354984351972 0.9573457260035342 1.137330718638468 1.0056229740179536 0.9291906033199532 1.3826120194637133 1.3778602517118563 1.552292315373679 0.8926579282604367 1.260213434093548 1.0 10.670657667423848 HKT(ph)LPK ddPTM_A549_MK2206_60min_R1 2 HKTLPK 6 1 Q07021 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial 1 HKT(1)LPK;HKT(1)LPK 81.278 0.016775 21427300.0 7308.0 8885.9 7988.400000000001 8421.599999999999 11816.5 8661.5 8651.5 9309.7 12235.6 12134.0 8568.0 True False 8541.411736554184 9338.154355252404 9121.275240670559 10484.892378059987 10078.308503222894 9578.05418096162 10223.365563170102 10629.37848476051 9464.256136238204 9392.920972571002 6440.329135229782 1.3262383889405738 1.4499498642345756 1.41627470415689 1.6280056745400948 1.5648747589766332 1.487199486213819 1.5873979960506082 1.6504402588084914 1.4695298854319396 1.458453562751941 1.0 12.652918704311002 -10.375986068347386 0.7620943201137488 1.000688930778074 1.515614902245614 0.13157043072632169 0.15993940088114295 0.22682801606348735 0.24125226566341132 0.06537043668285708 0.02004647032342372 4.2074012501286365e-11 10.375986068347386 0.51492597146754 HKT(ph)LPK ddPTM_A549_PD325901_60min_R1 2 HKTLPK 6 1 Q07021 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial 1 HKT(1)LPK;HKT(1)LPK 87.616 0.015353 21422400.0 8525.4 9527.400000000001 9697.3 9800.900000000001 12666.400000000001 12224.8 10880.4 10455.3 12190.5 10387.2 9520.0 True False 9390.892331932233 10330.307434413216 10355.417092602067 10406.279333541112 11776.7557607078 12125.245281919515 11294.459575983337 10246.760839475814 11678.175678605678 9731.350419309352 8349.1003522522 1.1247789505127945 1.2372958760313113 1.2403033447560197 1.2463952874556095 1.4105418864118666 1.4522816555497127 1.3527756404241345 1.2272892176594465 1.3987346164135452 1.1655567676443468 1.0 13.027405034671581 -10.873038945301255 1.0520043003628903 0.9950781773663481 1.3080584137382887 0.3567933949140929 0.10385308587572081 0.3194776821615872 0.6112535305987475 0.0757617944835161 0.017156811070353332 1.3395565574793966e-11 10.873038945301255 0.3129802363719406 HLAESESLLTS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 HLAESESLLTSPPK 14 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HLAESESLLT(0.178)S(0.822)PPK;HLAESESLLT(0.158)S(0.842)PPK 108.58 4.5939e-06 24317000.0 1701.95 1562.67 1832.23 1515.57 2702.3 1686.19 1817.96 1799.67 2947.5 2794.5 2895.2 True False 1989.1975513175134 1642.2032282967716 2092.067765036029 1886.884718036522 2304.795249715165 1864.6215065976642 2148.2597999446016 2054.7787337582263 2279.895956190307 2163.2205091354613 2176.2419365449637 0.914051658463854 0.7546050835248399 0.961321317223318 0.8670381203259827 1.0590712415800123 0.8568080024953324 0.9871419918298299 0.944186718973179 1.0476298236444732 0.9940165534029844 1.0 11.087623237045921 -6.592522538447879 0.438272065693971 1.0217701440052822 0.8131519248450368 0.31812124830800725 0.07132716207731903 1.305405699019718 0.3378737125197397 0.017159544331964215 0.11749480249333115 2.5555092751396097e-07 6.592522538447879 -0.20861821916024537 HLAESESLLTS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 HLAESESLLTSPPK 14 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HLAESESLLT(0.247)S(0.753)PPK;HLAESESLLT(0.37)S(0.63)PPK 109.79 3.8337e-06 37455000.0 2455.11 2234.97 2026.1499999999999 2600.0 2707.5 2867.6 2167.25 2711.3 3464.2 2580.0 2862.2 True False 2704.350959843543 2423.3187655278975 2163.656723229733 2760.596094971572 2517.3345403679323 2844.2472163497496 2249.725884714704 2657.2209945262966 3318.611721080004 2417.0983596944443 2510.167544980698 1.0773587465311356 0.9654012021522379 0.8619570942808802 1.0997656712165003 1.0028551860618091 1.133090586736759 0.8962453080923741 1.0585831212102335 1.3220678148420257 0.9629231182307516 1.0 11.293567946944005 -8.532910314341782 24.67794808603328 1.1541001057461828 1.0045685436989578 0.044171004411219905 0.11793542987756941 210.00285969536395 516610.56280133926 0.022431082212214057 0.02544910757892431 2.931498563171811e-09 8.532910314341782 -0.14953156204722506 HLDAHTAAHSQS(ph)PR ddPTM_A549_MK2206_60min_R1 1 HLDAHTAAHSQSPR 14 0 O94901-9;E9PHI4;H7C3X3;H0Y6N5 O94901-9 SUN1 SUN domain-containing protein 1 1 HLDAHT(0.002)AAHS(0.181)QS(0.817)PR 75.018 0.0010645 4852500.0 336.12 273.74 532.2 310.5 397.39 409.66 442.45 485.78 454.8 680.29 426.17 True False 392.84883865497983 287.67219676192565 607.6739626314244 386.57251393887486 338.93445741934994 453.0099492897004 522.8374378344347 554.6408026388565 351.7885261663615 526.612016518076 320.340227306358 1.226348754130333 0.8980208298560324 1.8969642612205375 1.2067560705361413 1.0580452547884638 1.414152549927685 1.6321316939518125 1.7314116534868558 1.0981715569238448 1.6439147244983676 1.0 8.323461168315879 -8.970685080025806 24.188734271817054 1.043310651995212 1.3789734803510105 0.0 0.3313496297908939 138.0426327681521 113904.82368603826 0.04852905398531593 0.050986928213265295 1.0698303641576525e-09 8.970685080025806 0.3356628283557985 HLDGEEDGS(ph)SDQSQASGTTGGR ddPTM_A549_MK2206_60min_R1 2 HLDGEEDGSSDQSQASGTTGGR 22 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 HLDGEEDGS(0.845)S(0.155)DQSQASGTTGGR;HLDGEEDGS(0.848)S(0.152)DQSQASGTTGGR 128.98 3.4529e-22 12939400.0 876.5 791.99 776.5799999999999 623.1099999999999 990.29 600.5699999999999 885.22 610.28 967.26 1012.15 1044.94 True False 1024.4317716324226 832.2989081372008 886.7107213459446 775.7719779724704 844.619652829231 664.1219187738981 1046.0530155267227 696.789058904116 748.1771543968229 783.5046120312954 785.4525591231331 1.3042567112851247 1.0596424933243151 1.128916967736224 0.987675154866807 1.0753286662814505 0.8455277292817193 1.3317838275229759 0.8871179434210519 0.9525427674869072 0.9975199684955991 1.0 9.617380329985858 -2.0000000000012466 0.5290577403769564 0.9878379345196346 12.158880135437052 0.2999577914385795 0.12305750371873321 87.51298168464716 0.7697997433072018 0.020044797156831027 1107.5332948243204 0.009999999999971297 2.0000000000012466 11.171042200917418 HLDGEEDGSS(ph)DQSQASGTTGGR ddPTM_A549_PD325901_60min_R1 2 HLDGEEDGSSDQSQASGTTGGR 22 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 HLDGEEDGS(0.443)S(0.557)DQSQASGTTGGR;HLDGEEDGS(0.454)S(0.546)DQSQASGTTGGR 129.29 3.3596e-22 15569300.0 1015.9000000000001 1244.83 710.9200000000001 964.92 1237.3000000000002 1019.02 1016.91 755.8299999999999 1037.08 1112.99 1161.6799999999998 True False 1119.033420133948 1349.7361928312646 759.1673063092477 1024.5209169076809 1150.3963164532745 1010.7214389750047 1055.6090665245038 740.7543777128355 993.4951341428481 1042.7156214559382 1018.8007244962531 1.0983830235174352 1.3248284579878393 0.7451577998088081 1.0056146332387583 1.1291671558459961 0.992069807836814 1.0361290889800363 0.7270846593470005 0.9751613934453007 1.023473576711 1.0 9.992656175325957 -7.692789977886709 2.727242452268183 0.9666718943967286 1.053772118889863 0.10126688477471579 0.14950574974051445 0.620328131721739 9.420531069112705 0.02319293832693287 0.03513067482508267 2.0286635314251408e-08 7.692789977886709 0.08710022449313437 HLDRS(ph)PESDRPR ddPTM_A549_MK2206_60min_R1 5 HLDRSPESDRPR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 HLDRS(0.999)PES(0.001)DRPR;HLDRS(1)PESDRPR;HLDRS(1)PESDRPR;HLDRS(0.961)PES(0.039)DRPR;HLDRS(0.949)PES(0.051)DRPR 146.27 1.4096e-12 585506300.0 4898.57 5843.93 6205.23 5956.879999999999 8670.6 6468.860000000001 6145.860000000001 6744.25 9929.97 8416.449999999999 6887.08 True False 5725.328857461989 6141.361075556801 7085.22492134422 7416.315867414507 7395.166225874368 7153.390471518255 7262.483208699601 7700.268090899393 7680.847649903667 6515.168099521614 5176.8279622617065 1.1059530854026387 1.1863173975118344 1.3686421439913474 1.4325984795087512 1.4285130353536977 1.3818095798557322 1.4028828583143975 1.48744909953222 1.4836976824217234 1.2585251329609957 1.0 12.337852659628181 -10.849929819693008 1.0961473007895233 0.9999596634109789 1.3755208399907652 0.2442992322714579 0.13420991918661992 0.3026923487820891 0.6455384413569787 0.08651634983266336 0.021122953923772517 1.4127658236656187e-11 10.849929819693008 0.3755611765797864 HLDRS(ph)PESDRPR ddPTM_A549_PD325901_60min_R1 4 HLDRSPESDRPR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 HLDRS(0.993)PES(0.007)DRPR;HLDRS(0.996)PES(0.004)DRPR;HLDRS(0.999)PES(0.001)DRPR;HLDRS(0.987)PES(0.013)DRPR 123.92 1.4933000000000002e-06 1329563000.0 6040.13 7175.799999999999 8790.5 8822.5 12084.1 11231.4 9254.5 10759.1 10610.1 8845.699999999999 7530.0 True False 6653.3195510913065 7780.52984947229 9387.076191570695 9367.445787648734 11235.35450388186 11139.935202158795 9606.68506175672 10544.501310149326 10164.194394616641 8287.180992383395 6603.857736602838 1.0074898364654827 1.178179506555324 1.4214534240405372 1.4184808578973938 1.701332001991545 1.6868829775684129 1.4547080577630067 1.5967184228855962 1.5391298238119397 1.2548999876921174 1.0 12.689093326035565 -10.743534921214154 0.9907660889415768 0.9994688133965542 1.4574556995390981 0.22632242425778692 0.20839791939304408 0.4542716995273832 0.7906855738267334 0.1457597818953262 0.03722414084001122 1.8049495969830256e-11 10.743534921214154 0.4579868861425439 HLDS(ph)PPAIPPR ddPTM_A549_MK2206_60min_R1 2 HLDSPPAIPPR 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLDS(1)PPAIPPR;HLDS(1)PPAIPPR 67.252 0.0014512000000000001 3694800.0 534.144 500.09000000000003 505.95 467.01 832.3700000000001 806.32 788.28 647.56 965.98 765.7 832.25 True False 624.2944486330047 525.5424449429073 577.7013179131325 581.4274709648754 709.9294756338713 891.6442472081021 931.5002723384067 739.3536130693273 747.187072353083 592.7278381982546 625.5793560685087 0.9979460520507277 0.8400891746903393 0.9234660835736834 0.9294224071249594 1.1348352031554656 1.4253095767285135 1.4890201591569079 1.1818702230134954 1.1943921504200927 0.9474862500631233 1.0 9.289049094701008 -6.769368758695197 5.245275962923351 1.1599896879835578 0.9150778370278 0.4077316323252007 0.15485265384464972 0.1721714244871451 13.69830058821162 0.025263056524510354 0.050623762908622076 1.7007138219697653e-07 6.769368758695197 -0.24491185095575785 HLDS(ph)PPAIPPR ddPTM_A549_PD325901_60min_R1 1 HLDSPPAIPPR 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLDS(1)PPAIPPR 75.479 0.00038695 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 HLDVDLDRQS(ph)LSS(ph)IDKNPSER ddPTM_A549_PD325901_60min_R1 2 HLDVDLDRQSLSSIDKNPSER 21 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 2 HLDVDLDRQS(0.996)LS(0.068)S(0.932)IDKNPS(0.003)ER;HLDVDLDRQS(0.997)LS(0.251)S(0.752)IDKNPSER 106.88 2.1818999999999997e-10 67640000.0 6373.4 8858.2 10097.1 9402.7 10507.1 10531.7 8791.0 10494.099999999999 12008.0 10587.1 9677.8 True False 7020.4228761509 9604.7116018556 10782.34992479477 9983.483423918922 9769.117543527202 10445.933326974013 9125.546315619782 10284.786943037805 11503.345518944845 9918.628699194214 8487.491952628814 0.8271492821829985 1.1316313058630652 1.270381166188343 1.1762583669757423 1.1510016855452136 1.2307444160507999 1.075175843058484 1.2117580788812787 1.3553291812408654 1.1686171550503959 1.0 13.051122586136334 -5.274975579749476 4.043484931096161 1.177069690164492 0.8008002907713055 0.5646296979020226 0.08907001607434534 0.1713550833825769 5.888664293560237 0.017282445548893372 0.18353573577828228 5.309142965458681e-06 5.274975579749476 -0.3762693993931864 HLDVDLDRQS(ph)LSSIDKNPSER ddPTM_A549_PD325901_60min_R1 1 HLDVDLDRQSLSSIDKNPSER 21 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 HLDVDLDRQS(0.998)LS(0.001)SIDKNPSER 114.35 4.1414e-15 9612100.0 568.8 672.43 816.22 673.36 950.13 732.91 576.33 888.29 732.63 750.33 721.87 True False 626.5441572715712 729.0980359932903 871.6135975295869 714.9519178884843 883.3961465705567 726.9414239555363 598.2625535298774 870.5723590999754 701.8401088894537 702.9540357478811 633.0845663109549 0.9896689804373288 1.1516597857404978 1.3767727787277515 1.1293150329893185 1.3953841138762735 1.1482532707936546 0.9449962696390015 1.3751280720250139 1.1086040416040215 1.110363564608852 1.0 9.306254414939525 -9.62459316638254 0.6915202224851786 1.0077006895365752 1.1944870151387454 0.08225525925831956 0.14605637756718884 0.7188450602517484 0.7399444304920575 0.057947306439702764 0.03225653920042066 2.3735961758989287e-10 9.62459316638254 0.18678632560217023 HLDVDLDRQSLS(ph)SIDKNPSER ddPTM_A549_PD325901_60min_R1 1 HLDVDLDRQSLSSIDKNPSER 21 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 HLDVDLDRQS(0.35)LS(0.528)S(0.099)IDKNPS(0.023)ER 68.23100000000001 0.00020493 10304000.0 3320.9 3744.8 3374.7 3727.6 4495.1 3697.4 3110.5 3854.7 4507.6 4401.3 4380.6 True False 3658.0353232826315 4060.387438376743 3603.727435719655 3957.845386006166 4179.379683253143 3667.289600269061 3228.871779630911 3777.81498454635 4318.161247601249 4123.401166869445 3841.8139709113425 0.9521635745457202 1.0568932980931274 0.9380275731739273 1.0302022471606815 1.08786623061338 0.9545724046078989 0.8404550048697357 0.9833414665963612 1.1239901984574512 1.0732953750728604 1.0 11.907571946887439 -8.660423809019822 11.84828245230796 1.0585384128141204 0.9811666380359109 0.23687827374405002 0.06786521777569512 0.5806582718162738 64.25269831576882 0.012994430484197772 0.014733468465149238 2.185627724276503e-09 8.660423809019822 -0.07737177477820956 HLDVPDIIITPPTPT(ph)GMMLPR ddPTM_A549_PD325901_60min_R1 2 HLDVPDIIITPPTPTGMMLPR 21 0 R4GN89;R4GMY0;Q96GX8 R4GN89 C16orf74 Uncharacterized protein C16orf74 1 HLDVPDIIIT(0.02)PPT(0.416)PT(0.564)GMMLPR;HLDVPDIIIT(0.034)PPT(0.391)PT(0.575)GMMLPR 46.361999999999995 0.0041140000000000005 8938700.0 1717.71 1903.7 2109.6 1676.01 2743.0 2775.7 2242.3999999999996 2524.2 2272.3 2473.75 2927.5 True False 1892.0906546887315 2064.131480035731 2252.7701420553462 1779.5333312051173 2550.3411428362815 2753.095619480403 2327.7357590883626 2473.852850803406 2176.803133136105 2317.5570028271845 2567.4360589515027 0.7369572644630649 0.803966070679356 0.8774396286135123 0.6931169035352135 0.9933416390037763 1.072313216869253 0.9066382591973762 0.9635499362012099 0.8478509622650834 0.9026736984342408 1.0 11.326112631864852 -6.77127112966847 24.998851556226814 0.9425259238929188 0.7868460859267349 0.5892485902430561 0.07057305424900799 136.57727916215597 347270.8101283696 0.011640221982428324 0.022188090838275554 1.6932803569425662e-07 6.77127112966847 -0.1556798379661839 HLEAADKGHS(ph)PAQKPK ddPTM_A549_MK2206_60min_R1 4 HLEAADKGHSPAQKPK 16 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0 Q14966-3 ZNF638 Zinc finger protein 638 1 HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK 177.61 4.6631999999999994e-29 288397000.0 6420.9 7859.700000000001 8301.0 6129.0 10966.800000000001 8358.300000000001 7613.1 7342.299999999999 10864.900000000001 10449.599999999999 9018.400000000001 True False 7504.59094406688 8259.725158506999 9478.20662120153 7630.605275141268 9353.598247632115 9242.769758209493 8996.301724437417 8383.093509850703 8404.017497680084 8089.028102437607 6778.882384822157 1.10705430748726 1.218449397647086 1.398196056981772 1.1256435562632137 1.3798142107576197 1.363465130904757 1.3271069202469181 1.2366483195844136 1.2397349622847251 1.1932686899169178 1.0 12.72683172457511 -10.321967522673598 0.6607098993820093 0.993180972322336 1.2761145828600244 0.20884264464243307 0.10666357552605196 0.45725277846464635 0.3575891482881315 0.06787407793880335 0.019377868030672363 4.764666165080322e-11 10.321967522673598 0.2829336105376884 HLEAADKGHS(ph)PAQKPK ddPTM_A549_PD325901_60min_R1 4 HLEAADKGHSPAQKPK 16 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0 Q14966-3 ZNF638 Zinc finger protein 638 1 HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK 149.94 2.7050999999999997e-15 280390000.0 6706.6 7535.59 10454.4 8973.0 11369.8 11391.6 10598.0 11397.8 12472.599999999999 10178.3 8447.4 True False 7387.449094862024 8170.640615455404 11163.898451414218 9527.241830838431 10571.224471680624 11298.830586472943 11001.312689448127 11170.461937598875 11948.419996634855 9535.64040096046 7408.42335248059 0.99716886351918 1.1028852195277956 1.5069196130207876 1.2860012687650184 1.4269195979656077 1.5251329532470241 1.4849735451153065 1.5078055621455038 1.6128154977312577 1.287134920248261 1.0 12.854950828059488 -5.6110727621167555 5.837173400098942 1.3575748014700482 1.0223445409776566 0.38926437269368563 0.16466504406530366 0.22233884943603038 11.343164400847051 0.03292639545157264 0.13305961412938333 2.4486529577955925e-06 5.6110727621167555 -0.3352302604923916 HLEELDKS(ph)HLEGELRPK ddPTM_A549_PD325901_60min_R1 1 HLEELDKSHLEGELRPK 17 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 HLEELDKS(1)HLEGELRPK 79.568 7.8557e-05 3377700.0 558.25 515.72 667.63 696.38 796.53 891.63 910.91 617.15 781.96 980.4 834.05 True False 614.9231290380706 559.1815343194977 712.9393865853298 739.3938110062707 740.5844806793234 884.3688608989848 945.5751785190786 604.8404591051907 749.0969405391497 918.4973766838893 731.4671374785655 0.8406708894096967 0.7644656959532699 0.9746704261286397 1.010836677577928 1.0124644604434128 1.2090343032326587 1.292710403612339 0.8268867159092497 1.0241019755465102 1.2556919232899981 1.0 9.514649239836787 -5.88692484036315 3.8921361719715306 1.031779782740422 0.8026827510017909 0.3495268996523143 0.13385896146409845 0.1762752062350453 4.9284852490533195 0.01615665818068776 0.05625664064153901 1.297403782148257e-06 5.88692484036315 -0.22909703173863116 HLEINPDHPIVETLR ddPTM_A549_MK2206_60min_R1 2 HLEINPDHPIVETLR 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 123.29 3.313e-07 22205200.0 469.45 443.09 957.6399999999999 766.72 1051.37 754.69 621.06 732.02 839.7 1167.12 805.8900000000001 False True 548.6816830494475 465.6413884095913 1093.4477519247594 954.5664344193683 896.7148657414177 834.5507948773223 733.8985628691469 835.7860767172299 649.5092907253601 903.4667813999566 605.7652715674984 0.9057661586139801 0.7686828715100853 1.8050684039633331 1.5758025083697855 1.4803008819258463 1.377680157724808 1.2115230062134241 1.3797193664709797 1.0722128210563608 1.4914469742745666 1.0 9.242615060787664 -8.835255309578 5.094493807806483 1.0315901439930213 1.324351884529826 0.0 0.3066826352632929 0.26654040005396995 12.495004178834552 0.05036745916070466 0.05356055381277263 1.4613178540052623e-09 8.835255309578 0.2927617405368048 HLEINPDHPIVETLR ddPTM_A549_PD325901_60min_R1 2 HLEINPDHPIVETLR 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 125.73 1.2247e-07 32972000.0 482.4 708.23 779.28 577.17 1076.23 845.0699999999999 922.1500000000001 801.78 933.4200000000001 693.77 850.08 False True 531.3728928758895 767.915027633401 832.1666269913212 612.8204800518245 1000.6393175919404 838.188030102065 957.2429228698426 785.7878689157583 894.191603455487 649.9652438004707 745.5255491011076 0.712749406799773 1.0300318058305162 1.1162147668777793 0.821997959413614 1.342193193510843 1.1242914895575102 1.283984062013711 1.0540052850813706 1.199411079249569 0.8718215553902137 1.0 9.54211398417462 -4.771505853793969 1.1849280138882439 1.1118219050746339 5.304479717854973e-12 0.33503871195473656 0.15010710462165403 3.1789705737641785 1.652584101121217 0.01937122262460466 5.78331604290224 1.692365433128089e-05 4.771505853793969 -1.1118219050693294 HLEINPDHSIIETLR ddPTM_A549_MK2206_60min_R1 2 HLEINPDHSIIETLR 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 127.71 3.3453e-09 17382000.0 380.37 309.24 405.57 340.99 453.69 197.01 475.14 423.32 490.79 410.96 483.17999999999995 False True 444.5671568463483 324.9789951291659 463.08592451038487 424.53256530762286 386.9528019995087 217.857467435346 561.4667876882207 483.3269063631291 379.6268486305818 318.1238505758843 363.1930709104018 1.224051867872835 0.8947830263241362 1.2750406370627765 1.16888949517529 1.0654190098658802 0.5998392725093881 1.545918225479396 1.3307712758715153 1.045248048590206 0.8759083695579758 1.0 8.504592868563908 -8.977935799048963 24.373901295318255 1.0199621930476714 1.1325014674030676 0.0802990232433155 0.23474094668077056 303.5931569952779 335378.4532717773 0.040161411509288855 0.04124592947511964 1.0521173948987754e-09 8.977935799048963 0.11253927435539612 HLEINPDHSIIETLR ddPTM_A549_PD325901_60min_R1 4 HLEINPDHSIIETLR 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;; 133.66 1.7964000000000001e-09 24349100.0 1497.46 1360.26 1603.845 1751.66 2165.83 2155.83 1715.03 2122.3500000000004 2404.1 1876.3700000000001 1861.2300000000002 False True 1649.4810368282126 1474.893884032885 1712.6915664034696 1859.8560598915021 2013.7095725078766 2138.273635243158 1780.2964051504268 2080.0180642986334 2303.0640374829513 1757.8956779766927 1632.310509309072 1.0105191551614825 0.9035620830850261 1.0492437294472983 1.1394008978590393 1.233655950276424 1.3099674498501215 1.0906603829341237 1.2742784246234304 1.4109227529618722 1.0769370582076192 1.0 10.672699807430845 -6.216911140189242 2.16462099356126 1.2070814654508188 0.95821700852851 0.41082905577941964 0.11239497976540562 0.3078297663484297 2.769202349140415 0.022035235344423976 0.07205434913732822 6.068604849570334e-07 6.216911140189242 -0.24886445692230885 HLFS(ph)STENLAAGSWKEPAEGGGLSSDR ddPTM_A549_MK2206_60min_R1 1 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.51)S(0.478)T(0.012)ENLAAGSWKEPAEGGGLSSDR 58.11 0.00065166 3906700.0 944.16 1241.1 868.01 954.17 1683.0 1342.4 1161.2 828.21 1953.2 2134.6 1866.2 True False 1103.5111255042411 1304.266688833293 991.1068701685508 1187.9416928343185 1435.4329294566191 1484.4518769869974 1372.1750091837396 945.6113037867494 1510.8033186194752 1652.3923774559144 1402.7710355002114 0.7866651774077601 0.9297787420940062 0.706535026092219 0.8468535939015256 1.0232838382956495 1.0582282064711006 0.9781888665062424 0.6741023872435146 1.0770134828744455 1.1779487426233397 1.0 10.45406383181996 -6.535445266013103 0.3871565307768816 1.028430651706423 0.7461781108334812 0.2793585943691196 0.1300749393286685 2.50933218746841 0.4812235374329425 0.03892758031317367 0.28398444860715427 2.914437417189587e-07 6.535445266013103 -0.2822525408729418 HLFSS(ph)TENLAAGSWK ddPTM_A549_MK2206_60min_R1 2 HLFSSTENLAAGSWK 15 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.104)S(0.879)T(0.017)ENLAAGSWK;HLFS(0.12)S(0.856)T(0.024)ENLAAGSWK 140.46 7.9264e-12 23986000.0 2943.6 3464.6 2833.33 2864.84 5501.3 4309.8 3799.1000000000004 4719.700000000001 6555.6 5537.799999999999 5139.0 True False 3440.407715889558 3640.9333414969224 3235.138798463911 3566.7259286075546 4692.0660575280435 4765.860175386298 4489.3472936530725 5388.731928475056 5070.767067142041 4286.807133830867 3862.8444708153415 0.8906410138649412 0.9425524038063122 0.8375016967175645 0.9233418418874927 1.2146660557984297 1.2337696253093913 1.1621869137033864 1.3950165400621581 1.3127028813748072 1.1097540080162842 1.0 11.915447876365901 -6.727484707763832 6.563721520128071 1.1815260634428941 0.8951937808306086 0.6779576375741385 0.10056861248789953 0.12196514733446404 15.299661988476233 0.01964483099218268 0.04060469685363635 1.8729030299093603e-07 6.727484707763832 -0.2863322826122855 HLFSS(ph)TENLAAGSWK ddPTM_A549_PD325901_60min_R1 2 HLFSSTENLAAGSWK 15 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.103)S(0.87)T(0.027)ENLAAGSWK;HLFS(0.088)S(0.797)T(0.115)ENLAAGSWK 140.46 7.9264e-12 33507000.0 6876.5 7121.0 7190.7 8409.2 9168.400000000001 8382.3 6727.7 7475.0 10546.6 8145.4 8836.2 True False 7574.597217788253 7721.111661151672 7678.704143191786 8928.61718532114 8524.443213262917 8314.037327942706 6983.726305038696 7325.905260975943 10103.363078789445 7631.098053897342 7749.403417286857 0.977442624924048 0.9963491697861446 0.9908768107313448 1.1521683289069415 1.100012833794038 1.0728615972419633 0.9011953474327923 0.9453508698016414 1.3037601134884178 0.9847336166387199 1.0 12.919869534397273 -8.731837951972366 24.999001454929203 1.1434424036442525 1.0207412452764573 0.053521671406658866 0.10491392207502914 277.0240387190137 233952.26434311867 0.021472602557904494 0.024345969477914536 1.854223359552391e-09 8.731837951972366 -0.12270115836779527 HLFSS(ph)TENLAAGSWKEPAEGGGLSSDR ddPTM_A549_MK2206_60min_R1 4 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.097)S(0.793)T(0.11)ENLAAGSWKEPAEGGGLSSDR;HLFS(0.08)S(0.46)T(0.46)ENLAAGSWKEPAEGGGLSSDR;HLFS(0.086)S(0.815)T(0.1)ENLAAGSWKEPAEGGGLSSDR;HLFS(0.128)S(0.722)T(0.151)ENLAAGSWKEPAEGGGLSSDR 166.88 1.7504e-42 49942000.0 6781.91 8219.3 7732.200000000001 7074.4 12429.7 9472.8 8333.800000000001 9488.5 15137.400000000001 14239.3 13526.7 True False 7926.530606219786 8637.62726253121 8828.742228220026 8807.628317581879 10601.307595524022 10475.205408464262 9847.943585545512 10833.523932312548 11708.803069460606 11022.632240376652 10167.647072071972 0.7795835703219891 0.8495207594544317 0.8683171402035001 0.8662405623592374 1.0426510204748558 1.030248722660435 0.968556787596945 1.06548976921805 1.1515744976654245 1.0840887928391136 1.0 13.311698238666615 -6.611537340261649 0.8475537710619662 1.0683107287072955 0.7949567803172385 0.8006466469845375 0.049768847022517874 0.29071034843079163 0.3655216266981416 0.01086704992066439 0.04794741375354498 2.446034959052629e-07 6.611537340261649 -0.273353948390057 HLFSS(ph)TENLAAGSWKEPAEGGGLSSDR ddPTM_A549_PD325901_60min_R1 4 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.099)S(0.789)T(0.112)ENLAAGSWKEPAEGGGLSSDR;HLFS(0.153)S(0.826)T(0.02)ENLAAGSWKEPAEGGGLSSDR;HLFS(0.123)S(0.855)T(0.022)ENLAAGSWKEPAEGGGLSSDR;HLFS(0.173)S(0.812)T(0.015)ENLAAGSWKEPAEGGGLSSDR 182.56 8.519199999999999e-58 113390000.0 6620.7 7149.9 7431.900000000001 8612.3 9145.5 10886.0 7804.2 9146.7 10823.7 10978.400000000001 9713.4 True False 7292.828590098261 7752.447165576228 7936.273425645217 9144.262211047564 8503.151630262202 10797.348025241798 8101.193101622101 8964.261893052664 10368.817529430657 10285.221950414532 8518.71337831581 0.8560950775338902 0.9100490674225412 0.9316281782465906 1.0734323136547914 0.9981732278851851 1.2674857746389496 0.9509878712721457 1.052302324887581 1.2171811714928975 1.2073680019092237 1.0 13.0564198344921 -6.154360823283485 1.2653740730307388 1.097402822218038 0.8614202684742475 0.47223087150545207 0.09449128670239969 0.3956675893095426 1.0993989203611632 0.015214671002415279 0.07841673308900877 7.008727529306888e-07 6.154360823283485 -0.23598255374379062 HLKS(ph)LR ddPTM_A549_PD325901_60min_R1 1 HLKSLR 6 1 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 HLKS(1)LR 43.246 0.038022 15115000.0 1394.5 1956.7 2149.5 1847.4 2413.6 2612.6 2363.9 2397.0 2311.4 1520.6 1776.5 True False 1536.068613423358 2121.5979760392474 2295.37799599354 1961.5097022501873 2244.0770624679726 2591.3238518047697 2453.859508075715 2349.189954589877 2214.259896110019 1424.5890564927809 1558.0017621613479 0.9859222567838672 1.361742988721686 1.4732833118296749 1.2589906827377848 1.4403559206215932 1.6632355076479113 1.5750043213504346 1.5078223989496315 1.4212178380583298 0.9143693486690995 1.0 10.605481149807497 -10.505061349746986 0.8675490705317549 1.0052742822635685 1.419685005389807 0.4952151483794792 0.1726738374377852 0.4310413220366958 0.5930245834133518 0.10890543737579052 0.032715417005886836 3.125637798923446e-11 10.505061349746986 0.4144107231262384 HLKS(ph)PVR ddPTM_A549_MK2206_60min_R1 1 HLKSPVR 7 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 HLKS(1)PVR 54.982 0.011472 24183000.0 1390.0 1739.6 1848.1 1808.5 2443.6 1979.4 1890.6 2294.5 2325.5 2119.8 1829.0 True False 1624.5980177627694 1828.1382095676393 2110.1883696714303 2251.5825811866503 2084.1496770173453 2188.858794180618 2234.0975476772123 2619.7524016115462 1798.7779630604102 1640.9357077349616 1374.8088221679807 1.1816901314328838 1.3297399464492734 1.5348958601704386 1.6377423136084162 1.5159559957804039 1.592118670528267 1.6250241572891504 1.9055394170953701 1.308384070611257 1.1935737400545021 1.0 10.425015299309461 -9.429491297624915 1.4255412834842547 1.0809760943649005 1.5355261319298217 0.4363626176417411 0.1864549952424531 0.2141834681494329 0.8953758076385633 0.04634429942184731 0.03780290354370839 3.7197067462046014e-10 9.429491297624915 0.4545500375649212 HLKS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 HLKSPVR 7 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 HLKS(1)PVR 53.683 0.012353 40215000.0 2055.3 2991.4 2713.0 3558.5 4375.5 3023.2 3378.3 3601.2 3003.3 3240.2 2707.9 True False 2263.95254296811 3243.4957763192115 2897.120494594311 3778.3004630601304 4068.1799746555416 2998.580061538765 3506.8630551766946 3529.37124091325 2877.0817452570814 3035.613219024008 2374.8454667924093 0.9533052043280621 1.365771298247901 1.2199195842865993 1.590966871694309 1.713029345084183 1.2626421817621694 1.4766699998856125 1.486147747406994 1.211481667117911 1.2782361048207764 1.0 11.213617923770652 -9.362652989040555 1.1211630429709376 1.049637642711439 1.3926234341432362 0.1398718091320028 0.20656756672085497 0.33967140198500534 0.8921290142298 0.050066746132821735 0.040093573947514304 4.3385740165178516e-10 9.362652989040555 0.3429857914317973 HLLANS(ph)PK ddPTM_A549_MK2206_60min_R1 2 HLLANSPK 8 0 Q9NRR4;Q9NRR4-3;Q9NRR4-2;Q9NRR4-4 Q9NRR4 DROSHA Ribonuclease 3 1 HLLANS(1)PK;HLLANS(1)PK 72.643 0.0017088000000000001 4957000.0 1633.86 2235.73 2211.0 1890.97 2681.8 1859.17 1844.33 2046.1599999999999 3148.1 2616.1 2794.0 True False 1909.6156239581849 2349.519107425075 2524.5530465578345 2354.2577348888694 2287.310772558979 2055.906135382834 2179.4208876057924 2336.2094461021916 2435.060376482682 2025.1211930396425 2100.1726895228767 0.9092660015458143 1.118726626217983 1.202069267518839 1.1209829299435927 1.0891060454074455 0.9789224217794683 1.0377341341872794 1.1123892133998459 1.1594572144616764 0.9642641308223637 1.0 11.036292244970209 -7.0122176764887065 24.28329145584291 1.0695103823044552 1.0990012184656692 0.008928896321204749 0.08662781656614753 1643.8325502148152 3267216.018271962 0.013335482931819579 0.02391786698680943 9.722597869047812e-08 7.0122176764887065 0.029490836161214062 HLLANS(ph)PK ddPTM_A549_PD325901_60min_R1 1 HLLANSPK 8 0 Q9NRR4;Q9NRR4-3;Q9NRR4-2;Q9NRR4-4 Q9NRR4 DROSHA Ribonuclease 3 1 HLLANS(1)PK 70.908 0.0019598 4169400.0 1381.6 1769.6 1878.2 1495.0 1694.3 1790.8 1768.0 1857.6 1933.6 1433.5 1648.0 True False 1521.859014919837 1918.7304024117395 2005.6659465341088 1587.3427546086536 1575.2982130176856 1776.2163185378479 1835.2822074867224 1820.5487107409915 1852.337516275128 1342.9885653573601 1445.3064475327335 1.0529663224832253 1.3275595675139917 1.3877098174978453 1.0982741807582668 1.089940625191882 1.2289548154787566 1.2698221962682807 1.259628166641635 1.281622675549004 0.9292067904699111 1.0 10.497159703659493 -10.811737214578992 1.0175761876147895 0.9977617982163115 1.2280149379286753 0.4731392211547639 0.10218468774994897 0.4354826573916928 0.7879166859600565 0.0730330661378037 0.017458777470309123 1.5426335962782226e-11 10.811737214578992 0.23025313971236383 HLLAPGPQDIY(ph)DVPPVR ddPTM_A549_MK2206_60min_R1 2 HLLAPGPQDIYDVPPVR 17 0 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 HLLAPGPQDIY(1)DVPPVR;HLLAPGPQDIY(1)DVPPVR 106.19 4.5019999999999995e-09 7939800.0 870.46 1048.75 1063.78 843.81 1162.99 874.27 966.99 676.1700000000001 2070.0699999999997 1578.98 1468.05 True False 1017.3723672962448 1102.1268954265706 1214.639999939979 1050.5434878800709 991.9157116035371 966.784671106542 1142.6795660786988 772.0191681837777 1601.2024502225152 1222.2873213507642 1103.4926688811943 0.9219566164655494 0.9987623176001628 1.1007232165588143 0.9520167351407895 0.8988874503436598 0.8761133611215945 1.035511696907996 0.6996142248652273 1.4510313438202878 1.1076533227810321 1.0 10.107861329681628 -8.762226754101048 24.99998360828153 1.212987009219476 0.9437590685860767 0.3838236685547737 0.1401120751189383 18.48072545578947 586781.2128352593 0.031003522530558717 0.0339638261856856 1.7289134221790435e-09 8.762226754101048 -0.2692279406333994 HLLAPGPQDIY(ph)DVPPVR ddPTM_A549_PD325901_60min_R1 2 HLLAPGPQDIYDVPPVR 17 0 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 HLLAPGPQDIY(1)DVPPVR;HLLAPGPQDIY(1)DVPPVR 107.07 4.056e-09 14619300.0 4354.6 4091.9 4330.7 4685.4 4632.9 5140.299999999999 4413.3 4729.9 5194.9 5272.9 5751.799999999999 True False 4796.675786312912 4436.738773524298 4624.607344614661 4974.806516684544 4307.501086637337 5098.439101061031 4581.250546550426 4635.558433965233 4976.5764187513805 4939.968194121259 5044.365063664308 0.9508978287206933 0.8795435535550593 0.9167868079030886 0.9862106437377401 0.853923344617786 1.0107196915199952 0.9081917126795999 0.9189577628622083 0.9865615109022889 0.9793042596589524 1.0 12.300456972794464 -8.809518394173615 5.681103509882964 0.9940020340029974 0.9276859183531301 0.2887969329215382 0.04208083692635302 0.1468518410523993 10.643884922113847 0.006683252030785851 0.007139467654073627 1.5505351138067582e-09 8.809518394173615 -0.06631611564986728 HLLQEARS(ph)PDPGIVPQEAPVGNSLSELSEENFDGK ddPTM_A549_MK2206_60min_R1 2 HLLQEARSPDPGIVPQEAPVGNSLSELSEENFDGK 35 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 HLLQEARS(1)PDPGIVPQEAPVGNSLSELSEENFDGK;HLLQEARS(0.997)PDPGIVPQEAPVGNS(0.002)LS(0.001)ELSEENFDGK 66.143 0.00027319 9423900.0 1180.48 1087.1299999999999 1437.4699999999998 812.86 1771.1399999999999 1262.19 1151.6999999999998 1236.95 1729.76 1777.0700000000002 1932.99 True False 1379.7161640349595 1142.4602734923367 1641.3248610743963 1012.0107364906725 1510.6076522149706 1395.7541080260864 1360.948982153732 1412.2914505005008 1337.9721218591162 1375.6286527712841 1452.9752351899865 0.9495799588453083 0.7862902586518979 1.1296303070573546 0.6965092810809986 1.0396651062104636 0.9606179611475497 0.9366635777352245 0.9719996709481659 0.9208499150256798 0.9467667579285418 1.0 10.504794398250136 HLLS(ph)PVGR ddPTM_A549_MK2206_60min_R1 4 HLLSPVGR 8 0 Q9NXE4-3;Q9NXE4-6;Q9NXE4-2;Q9NXE4;Q9NXE4-4;H7C1Q6;Q9NXE4-10;Q9NXE4-8;H7C0W5;Q9NXE4-9;Q9NXE4-7;Q9NXE4-5 Q9NXE4-3 SMPD4 Sphingomyelin phosphodiesterase 4 1 HLLS(1)PVGR;HLLS(1)PVGR;HLLS(1)PVGR;HLLS(1)PVGR 97.635 0.00089789 45472400.0 2523.42 3197.41 3333.1 3294.6899999999996 4679.35 4138.55 3285.3700000000003 3708.5 5108.25 4692.889999999999 3949.51 True False 2949.311604304264 3360.144511757682 3805.78369944908 4101.889197904255 3991.023813697463 4576.488614052845 3882.279202481899 4234.191231804932 3951.2395311990267 3632.762889646343 2968.7376660692526 0.9934564572723903 1.1318428536687346 1.2819535194863194 1.3816947333495275 1.3443504487824165 1.5415604640178027 1.3077205328223622 1.4262598141287435 1.3309493716333154 1.2236725835247986 1.0 11.535633899178235 -10.594296706164082 0.9092446178051119 1.002397934454319 1.3115362950853484 0.14000120878425482 0.15110647379322806 0.47603230754968706 0.7107689700691832 0.09423104852121753 0.026691059047076037 2.5450908748244305e-11 10.594296706164082 0.3091383606310294 HLLS(ph)PVGR ddPTM_A549_PD325901_60min_R1 4 HLLSPVGR 8 0 Q9NXE4-3;Q9NXE4-6;Q9NXE4-2;Q9NXE4;Q9NXE4-4;H7C1Q6;Q9NXE4-10;Q9NXE4-8;H7C0W5;Q9NXE4-9;Q9NXE4-7;Q9NXE4-5 Q9NXE4-3 SMPD4 Sphingomyelin phosphodiesterase 4 1 HLLS(1)PVGR;HLLS(1)PVGR;HLLS(1)PVGR;HLLS(1)PVGR 86.744 0.00116 67903300.0 5492.68 5793.27 6677.07 7204.96 8021.790000000001 7318.209999999999 7092.1 7742.4400000000005 7549.360000000001 6318.200000000001 6733.2699999999995 True False 6050.2928301027 6281.489194382833 7130.216122683686 7649.9940155486065 7458.367144073153 7258.612924104792 7361.993746446033 7588.010960373318 7232.086652806578 5919.267773729242 5905.120475715248 1.0245841477721702 1.0637359932308574 1.2074632773381393 1.2954848333762425 1.263033866073625 1.2292065765560192 1.2467135559252622 1.2849883404714504 1.2247144969435366 1.0023957678885935 1.0 12.527750778313969 -10.618548578627637 0.9160659720697081 1.001007356965096 1.2084874732013142 0.4723278092998848 0.08217548980683398 0.43734709638080294 0.659441394748031 0.05880363098459626 0.016294308202587596 2.4068632808731812e-11 10.618548578627637 0.20748011623621831 HLLTDLPLPPELPGGDLS(ph)PPDSPEPK ddPTM_A549_PD325901_60min_R1 1 HLLTDLPLPPELPGGDLSPPDSPEPK 26 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 HLLTDLPLPPELPGGDLS(0.996)PPDS(0.004)PEPK 151.35 2.6203000000000004e-33 47550000.0 4086.3 4947.9 5049.8 5612.5 6154.2 5589.9 5015.7 6365.2 6675.5 6080.4 5397.8 True False 4501.138167824935 5364.876897656562 5392.509794914248 5959.171378087674 5721.950222837426 5544.377707725437 5206.575208196356 6238.241092597197 6394.951949676572 5696.482506312445 4733.904819473416 0.9508298834630197 1.1332878674677986 1.1391250987412318 1.2588278821268217 1.2087167868900914 1.1712059957179655 1.0998478859943615 1.3177791549453077 1.350883085644279 1.20333693294368 1.0 12.208814984005816 -5.122360596949618 1.695035546398537 1.1830949045957866 0.8066208213575473 0.3614207167080805 0.09303531694988516 1.7681319838002902 3.7003720364447625 0.01870264639553036 1.1995709216546682 7.5446553090272824e-06 5.122360596949618 -0.3764740832382393 HLNT(ph)IQK ddPTM_A549_PD325901_60min_R1 2 HLNTIQK 7 0 Q7L7X3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 HLNT(1)IQK;HLNT(1)IQK 80.438 0.014128 15849400.0 3006.2 3096.4 3626.8 3667.6000000000004 4226.9 3945.8 4642.5 3975.9 4310.0 3462.9 3710.3 True False 3311.3872109525264 3357.3444948167466 3872.9364577201077 3894.1393222760526 3930.017126013375 3913.6667130258197 4819.1728779734785 3896.5975554667884 4128.865688428737 3244.2519030177905 3253.956621529553 1.017649463746071 1.0317729722034816 1.190223751630591 1.1967397772025539 1.2077656782548114 1.2027408992275268 1.4810193983803572 1.197495236932555 1.2688754549186105 0.9970175636492656 1.0 11.667979303244337 -5.755387166312414 20.445027626258803 1.1758912471848348 1.0247101658910713 0.20730949874615334 0.12344531980260286 21.49151316303183 72573.19144909024 0.019276289960566656 0.0702253848108627 1.7563571526153328e-06 5.755387166312414 -0.1511810812937635 HLPS(ph)PPLTQEVDLHSIAGPPVPPR ddPTM_A549_MK2206_60min_R1 2 HLPSPPLTQEVDLHSIAGPPVPPR 24 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLPS(1)PPLTQEVDLHSIAGPPVPPR;HLPS(1)PPLTQEVDLHSIAGPPVPPR 186.3 2.9963e-50 24069000.0 1085.5900000000001 1747.9 1369.94 908.0899999999999 1990.79 1511.5900000000001 1641.26 1467.65 1989.11 2403.7 2117.9 True False 1268.811051872723 1836.8606441154736 1564.2180916333966 1130.5720907657098 1697.9474281835658 1671.5454504877646 1939.455697186449 1675.6938819896209 1538.5797609559615 1860.702500557847 1591.966978933607 0.7970083982034899 1.1538308698751472 0.9825694328667557 0.7101730787927734 1.0665720147794464 1.0499875139416925 1.2182763354084207 1.0525933666740368 0.9664646197539806 1.1688072209916407 1.0 10.636594696031839 HLPS(ph)PPLTQEVDLHSIAGPPVPPR ddPTM_A549_PD325901_60min_R1 5 HLPSPPLTQEVDLHSIAGPPVPPR 24 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLPS(1)PPLTQEVDLHSIAGPPVPPR;HLPS(0.967)PPLT(0.033)QEVDLHSIAGPPVPPR;HLPS(1)PPLTQEVDLHSIAGPPVPPR;HLPS(1)PPLTQEVDLHSIAGPPVPPR;HLPS(0.921)PPLT(0.079)QEVDLHSIAGPPVPPR 128.4 2.1943e-22 28948000.0 6325.179999999999 6301.549999999999 5391.549999999999 6872.58 7239.4 6386.93 6396.660000000001 7441.2699999999995 6916.16 6893.05 6820.79 True False 6967.307617248587 6832.603733791643 5757.453005023942 7297.083657838357 6730.929518574187 6334.9169596598895 6640.088396686664 7292.848032286616 6625.497846794268 6457.821646624727 5981.876070550239 1.1647362023345469 1.1422175339655858 0.9624828293198568 1.2198654020538977 1.125220489222714 1.0590184224724628 1.110034430398335 1.2191573256073471 1.1075953043247895 1.07956459987823 1.0 12.546382306410786 -10.292933391463793 0.8588202442787378 1.0047567369119135 1.1214106126089278 0.13742956880880064 0.07172600873749037 0.5290289871537046 0.7506497296054867 0.03468124258668686 0.012876021881769607 5.094089940519439e-11 10.292933391463793 0.11665387569701435 HLQLAIR ddPTM_A549_MK2206_60min_R1 4 HLQLAIR 7 0 P16104;Q71UI9-2;Q71UI9;P0C0S5;C9J0D1;A0A494C189;C9J386;Q71UI9-4;Q71UI9-3;A0A0U1RR32;A0A0U1RRH7;P20671;A0A3B3IS11;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;H0YFX9;Q93077 P16104;A0A0U1RR32;Q99878;Q93077 H2AFX;H2AFV;H2AFZ;HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST1H2AC Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A;Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A type 1-C 0 ;;; 172.39 2.4879e-05 96290000.0 3633.1499999999996 5017.2 4467.88 4225.73 6530.200000000001 5418.1 4760.040000000001 4354.389999999999 7245.799999999999 6291.0 5243.3 False True 4246.3368980106525 5272.554049806141 5101.492567008058 5261.034039700227 5569.616230503629 5991.439745756297 5624.877653044241 4971.638117260096 5604.63786916496 4869.858730710744 3941.2439022817807 1.0774103311779915 1.3377893326402863 1.294386415429543 1.3348663950115736 1.413162029195682 1.5201900451498465 1.4271833442705035 1.2614388351813925 1.4220479645829982 1.2356146565533135 1.0 11.944435317498476 -10.799009507152132 0.9213121365348373 0.9884179707399642 1.3529349772727266 0.25048904525867766 0.12792177921140238 0.35444176531097427 0.5057172987277531 0.08997739090376068 0.019795342111862024 1.5885119740589982e-11 10.799009507152132 0.3645170065327624 HLQLAIR ddPTM_A549_PD325901_60min_R1 3 HLQLAIR 7 0 P16104;Q71UI9-2;Q71UI9;P0C0S5;C9J0D1;A0A494C189;C9J386;Q71UI9-4;Q71UI9-3;A0A0U1RR32;A0A0U1RRH7;P20671;A0A3B3IS11;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;H0YFX9;Q93077 P16104;A0A0U1RR32;Q99878;Q93077 H2AFX;H2AFV;H2AFZ;HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST1H2AC Histone H2AX;Histone H2A.V;Histone H2A.Z;Histone H2A;Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A type 1-C 0 ;; 160.69 0.0011814 95547600.0 3894.14 4424.01 4419.17 4572.97 5654.039999999999 4511.55 4757.179999999999 4766.75 4679.96 4256.96 4597.43 False True 4289.470226085646 4796.836848764445 4719.08145082799 4855.431970931597 5256.9197357790945 4474.8094325996335 4938.217088128782 4671.673431806964 4483.277556199291 3988.1748191026636 4031.975255509958 1.063863231854859 1.1896989799749522 1.1704142887233884 1.2042315895407174 1.3038075391447825 1.1098305790653138 1.2247637386614378 1.1586562753386982 1.1119308210219294 0.9891367298577941 1.0 11.97727106961534 -9.562399207621542 0.6712709094629482 1.0107007998805615 1.1860631777950896 0.5734461613138447 0.05963930194598571 0.32561641819479137 0.31894718036578656 0.02404913543959157 0.013810959470614352 2.7390552487401694e-10 9.562399207621542 0.17536237791452813 HLQLAIRNDEELNK ddPTM_A549_PD325901_60min_R1 2 HLQLAIRNDEELNK 14 1 P16104;A0A0U1RR32;A0A0U1RRH7;P20671;A0A3B3IS11;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;H0YFX9;Q93077 P16104;A0A0U1RR32;Q99878;Q93077 H2AFX;HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST1H2AC Histone H2AX;Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A;Histone H2A type 1-C 0 ; 100.54 0.00011165 7625000.0 2218.6 2113.2 2763.3 2930.3999999999996 2668.7 4956.799999999999 3579.3 4391.9 3208.1 2895.8 2857.8999999999996 False True 2443.830638753002 2291.2867802760456 2950.8341550727837 3111.404152578728 2481.259718515198 4916.433464221799 3715.512220168113 4304.3001091211 3073.2747134682654 2712.9586937996796 2506.3964177207504 0.9750375564992851 0.9141757321691676 1.1773214062267903 1.241385492965297 0.9899709802376709 1.9615546166047715 1.48241203741701 1.7173261494824967 1.226172640424941 1.0824140485593143 1.0 11.291398897506273 -5.849585874997948 4.132281652798045 1.2384538842394595 0.9432836071745234 0.1534784115815092 0.2950473924441685 0.3694599024942845 11.604129349410222 0.04549308668580552 0.15897671072707772 1.4138851235736142e-06 5.849585874997948 -0.29517027706493604 HLQQGSES(ph)PMMIGELR ddPTM_A549_MK2206_60min_R1 2 HLQQGSESPMMIGELR 16 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 HLQQGS(0.03)ES(0.97)PMMIGELR;HLQQGS(0.02)ES(0.98)PMMIGELR 92.993 2.496e-06 4110900.0 1520.15 1703.94 1506.35 1744.2599999999998 1847.85 1910.95 1409.52 1828.2 2652.0 2427.97 2343.6000000000004 True False 1776.7141559007712 1790.6632678838143 1719.973080815193 2171.6037783028073 1576.0337128320925 2113.165460614053 1665.6115388775959 2087.3529486276866 2051.3262343737715 1879.4898907016016 1761.6194399304977 1.0085686588306888 1.0164870046815915 0.976359048855099 1.2327315020935992 0.8946505000502678 1.1995584362405907 0.9455002034623949 1.1849057187459513 1.1644548123598726 1.0669102804495358 1.0 10.78268657928133 -7.2798990916624415 24.984016331612807 1.0850101090658701 1.0339981799088453 0.08949715525824464 0.1042800168293765 2215.246393491449 2998184.2400039183 0.015809450194712787 0.025295490959121928 5.249294134482774e-08 7.2798990916624415 -0.05101192915702479 HLS(ph)AEDFSR ddPTM_A549_MK2206_60min_R1 3 HLSAEDFSR 9 0 Q08495-2;Q08495;Q08495-3;Q08495-4 Q08495-2 DMTN Dematin 1 HLS(0.992)AEDFS(0.008)R;HLS(1)AEDFSR;HLS(0.999)AEDFS(0.001)R 66.595 0.0052967 6776000.0 2200.0099999999998 2346.83 1824.04 2183.49 3515.0 2319.04 2586.3100000000004 2829.0299999999997 3604.26 3346.75 3081.4 True False 2571.3179029196176 2466.2736228786066 2082.7162998839217 2718.4451480205894 2997.9481562923447 2564.4392735458355 3056.2090492611096 3230.0536660410166 2787.900864820516 2590.716850581178 2316.2033376863947 1.1101434235424474 1.0647914985487041 0.8991940672895765 1.1736642909495094 1.294337205854703 1.1071736370552847 1.3194908234239446 1.3945466762289735 1.2036511732192259 1.1185187450636302 1.0 11.177546196622544 -6.308840765048721 24.99310287080952 1.1544447879767006 1.028717590063543 0.2404076049356879 0.12035400435345595 614.6125587192851 324062.88070985203 0.020737312586109634 0.04818928178954141 4.910879015208471e-07 6.308840765048721 -0.12572719791315756 HLS(ph)ASTPK ddPTM_A549_MK2206_60min_R1 3 HLSASTPK 8 0 I3L2J0 I3L2J0 CIC 1 HLS(0.558)AS(0.436)T(0.006)PK;HLS(0.902)AS(0.098)T(0.001)PK;HLS(0.995)AS(0.005)TPK 81.525 0.0033077 31573300.0 9715.330000000002 11409.5 11733.599999999999 10181.900000000001 15422.3 11330.6 10473.8 11714.7 16881.0 16747.1 15543.0 True False 11355.040186986444 11990.1948160853 13397.600916820893 12676.465957082855 13153.700099797266 12529.596571356442 12376.753884936836 13375.294599764109 13057.480453417653 12963.918478633914 11683.244135022927 0.9719081494623034 1.026272726779904 1.1467363655150224 1.0850125025704582 1.125860244618731 1.0724415604563462 1.0593593476177536 1.1448271083943982 1.117624548670961 1.109616329917467 1.0 13.512153308531982 -2.906623077929914 17.61741158939017 1.0687507831004752 0.3844203238608045 0.0 0.05678132084111266 0.0 0.0 0.008273367212751383 0.0 0.001239872198758817 2.906623077929914 -0.6843304592396707 HLS(ph)ASTPK ddPTM_A549_PD325901_60min_R1 4 HLSASTPK 8 0 I3L2J0 I3L2J0 CIC 1 HLS(0.942)AS(0.058)T(0.001)PK;HLS(0.994)AS(0.005)T(0.001)PK;HLS(0.996)AS(0.004)TPK;HLS(0.928)AS(0.029)T(0.043)PK 89.04700000000001 0.0021961 60042000.0 17934.9 17899.3 22070.5 23791.8 24895.199999999997 26915.1 25455.9 27334.199999999997 24259.7 25315.3 25666.2 True False 19755.637845024437 19407.73682859881 23568.336850698037 25261.365450901787 23146.64703577754 26695.91234927295 26424.63820450297 26788.997937734934 23240.14917437926 23716.887637663865 22509.420111446998 0.8776608969583297 0.8622051004649892 1.0470432705066681 1.122257496009651 1.0283093443178701 1.1859884535940106 1.1739368705933442 1.190123859481906 1.032463255797543 1.053642764684232 1.0 14.458241270054717 -5.775328146248817 7.103211461985965 1.058977144521632 0.8691520850314632 0.559383095424469 0.07130328571135944 0.09432491895202874 23.00150516101819 0.011896684525696453 0.03999781226324145 1.677536018658697e-06 5.775328146248817 -0.1898250594901688 HLS(ph)ESSGKPLSTK ddPTM_A549_MK2206_60min_R1 4 HLSESSGKPLSTK 13 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 HLS(0.986)ES(0.011)S(0.004)GKPLSTK;HLS(0.942)ES(0.005)S(0.047)GKPLS(0.005)T(0.001)K;HLS(0.978)ES(0.011)S(0.011)GKPLSTK;HLS(0.975)ES(0.01)S(0.015)GKPLSTK 100.35 4.2815e-05 85592000.0 13859.0 17938.5 18457.7 14855.199999999997 19437.2 12940.3 11077.3 12672.6 20260.0 19680.2 18324.3 True False 16198.060379981447 18851.493028471545 21075.279406354824 18494.724666875274 16578.01362830314 14309.633956924048 13089.902023106297 14468.979858209841 15671.142348571877 15234.4291515075 13773.870585047978 1.17599917031056 1.368641654651199 1.5300912896069159 1.3427398313842116 1.2035842449615548 1.0388970818745502 0.950343038456877 1.0504657909241886 1.1377442710681087 1.1060383541025143 1.0 13.749646406647043 -6.964589678973656 2.6950399001588323 1.0545454307788569 1.3691299025272878 0.7203075781827073 0.08932103244053358 0.11699847599539517 1.72378997542346 0.014271377658914664 0.028315777765995642 1.0849514911043689e-07 6.964589678973656 0.31458447174843096 HLS(ph)ESSGKPLSTK ddPTM_A549_PD325901_60min_R1 2 HLSESSGKPLSTK 13 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 HLS(0.993)ES(0.003)S(0.005)GKPLSTK;HLS(0.992)ES(0.004)S(0.004)GKPLSTK 112.3 9.713e-06 33479000.0 3763.3 5650.1 4979.6 5415.8 7836.299999999999 8011.0 6633.0 10866.5 16152.0 24340.0 23164.0 True False 4145.347445604965 6126.253756027679 5317.545600767356 5750.32166582579 7285.90532176739 7945.761072038588 6885.4224447168735 10649.759132895666 15473.18761009302 22803.168246109613 20314.974848694306 0.20405378182741865 0.3015634428127992 0.2617549684590984 0.28305827147973933 0.35864702644392754 0.391128275137849 0.3389333482320022 0.52423196249146 0.7616641283258847 1.1224807520534652 1.0 14.310255957966028 -8.751666956193008 0.6486132940725209 0.9639286824039168 0.2615848273247325 0.9456359086071696 0.07012101034191452 0.07881284070119794 0.07139323196757336 0.016754109160953046 0.016860303181739925 1.771466907704897e-09 8.751666956193008 -0.7023438550791843 down HLS(ph)LPAGQVVPK ddPTM_A549_MK2206_60min_R1 2 HLSLPAGQVVPK 12 0 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 HLS(1)LPAGQVVPK;HLS(1)LPAGQVVPK 77.77600000000001 0.00032085 7973600.0 696.56 964.1700000000001 943.46 1224.0700000000002 1133.45 1009.31 844.35 942.3499999999999 1581.74 1270.19 1277.76 True False 814.1222987430461 1013.2421346969596 1077.2568147016984 1523.9672049505907 966.7210064721361 1116.1145142742448 997.7574655565718 1075.93099832584 1223.4784155197476 983.253196814733 960.456927618021 0.8476406128509149 1.0549584323472458 1.1216086674218142 1.5867106177578436 1.006521977898218 1.1620661813979123 1.0388362422779935 1.1202282657216083 1.2738503730240485 1.023734816774395 1.0 9.907577106419069 -11.142832676514923 1.531074184652353 1.0003674980753425 1.1581348318438776 0.054111393670042696 0.17695872861159465 0.8035274240534347 3.3883989222487267 0.12663180071918073 0.02738095625734278 7.197262182364533e-12 11.142832676514923 0.15776733376853502 HLS(ph)LPAGQVVPK ddPTM_A549_PD325901_60min_R1 2 HLSLPAGQVVPK 12 0 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 HLS(1)LPAGQVVPK;HLS(1)LPAGQVVPK 98.943 7.6783e-05 18942800.0 1801.71 1947.21 1800.81 2514.3 3076.7 2953.3 2266.73 2745.3 2620.7 2543.7 2059.7 True False 1984.6182728512013 2111.30822043409 1923.0237957502318 2669.6026006103957 2860.6032060387865 2929.2493039634946 2352.991650552249 2690.5428378538127 2510.5610927297403 2383.0903478894425 1806.3699575140602 1.0986776349970124 1.1688127405194937 1.064579150993361 1.4778825287176072 1.5836197862676868 1.6216220225422424 1.3026078300097805 1.4894749697656386 1.3898377141882903 1.3192703620741508 1.0 10.81887768202719 -10.623018295102444 0.9128504366057208 1.0011683590464449 1.3608692680077215 0.046275924328596396 0.1994423019437933 0.551498711129242 0.823507840991582 0.12862556611620118 0.03532837760791937 2.3822191138106734e-11 10.623018295102444 0.3597009089612766 HLSAS(ph)TPK ddPTM_A549_MK2206_60min_R1 1 HLSASTPK 8 0 I3L2J0 I3L2J0 CIC 1 HLS(0.214)AS(0.783)T(0.004)PK 69.375 0.0021816999999999995 12765000.0 1664.2 1797.2 1638.7 1538.7 2365.8 1797.7 1771.8 1778.4 2279.3 2451.8 2368.9 True False 1945.076274216402 1888.6698035381487 1871.0923009472283 1915.6815690748676 2017.7939539563097 1987.9314207833172 2093.713125449319 2030.4936461215834 1763.0421892941688 1897.9366771509478 1780.6367516860207 1.0923487187236136 1.0606710221777886 1.0507995520004618 1.0758407447566034 1.1331867389829697 1.1164160342647182 1.1758227069428155 1.1403188461649925 0.9901189490921198 1.0658752692562703 1.0 10.798177522611395 -8.771243591081406 24.99841934104176 0.9953339372791373 1.1049649965459565 0.45083985806668714 0.04059400046711314 92.80499343651447 236630.14513817953 0.006720575128374148 0.007197293405415964 1.6933877311527578e-09 8.771243591081406 0.10963105926681915 HLT(ph)PEPDIVASTK ddPTM_A549_MK2206_60min_R1 2 HLTPEPDIVASTK 13 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK 85.493 0.00026324 29560000.0 2785.2 3271.6 3666.8999999999996 2926.0 5005.2 3944.2000000000003 3836.9 3789.1 5764.9 4729.7 4463.5 True False 3255.273668397744 3438.110465866572 4186.921558762061 3642.870131353132 4268.9417103483465 4361.572626051937 4534.015064361946 4326.216528632079 4459.159354653605 3661.2574850806914 3355.0897636669124 0.9702493517907923 1.0247447037330302 1.2479313084565602 1.085774267741705 1.2723777934580947 1.2999868657120515 1.3513841308992398 1.2894488175791108 1.3290730408893772 1.0912547034447018 1.0 11.712135650153035 -5.662795465311129 5.073509550996508 1.1976033221967237 0.9844154088328116 0.36885373076151096 0.10933513020720308 0.22384572176157197 9.094653088564023 0.019765633777977333 0.0810046516589957 2.17372467199999e-06 5.662795465311129 -0.21318791336391207 HLT(ph)PEPDIVASTK ddPTM_A549_PD325901_60min_R1 2 HLTPEPDIVASTK 13 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK 119.45 1.0783e-05 45727000.0 3104.7 4138.0 3922.8 5300.9 5904.200000000001 5786.0 5338.7 3895.3 5486.299999999999 4086.7 3396.3 True False 3419.886858440659 4486.7237823122605 4189.024797712702 5628.324553782618 5489.509360384244 5738.880734342189 5541.867149948732 3817.6051856962645 5255.729890122176 3828.6650645594127 2978.576630919551 1.148161448303872 1.506331492611997 1.4063847658737119 1.8896020654150611 1.8429975255293378 1.9267191835082893 1.8605756495973842 1.2816877518164396 1.7645105502958365 1.2854008941100907 1.0 11.540407360958762 -10.823404147386297 0.8491861695008763 0.9598436752698956 1.6451215095484755 0.3119433092091545 0.263777350783811 0.5226404031648167 0.6017256217624474 0.2424199236522787 0.04740551932323769 1.5017438172550442e-11 10.823404147386297 0.6852778342785799 HLT(ph)S(ph)NSPR ddPTM_A549_PD325901_60min_R1 1 HLTSNSPR 8 0 P14923 P14923 JUP Junction plakoglobin 2 HLT(0.992)S(0.993)NS(0.016)PR 47.823 0.05608200000000001 2275200.0 332.67 441.18 217.59 340.75 419.67 441.66 417.86 384.93 382.56 436.3 335.81 True False 366.4424135012899 478.35978692134483 232.35696587496352 361.7973536006016 390.1938269829031 438.06326739190644 433.76189096176546 377.25226917825665 366.4823335882359 408.7519435405761 294.5074988749801 1.2442549507265568 1.6242703114476922 0.7889679100279895 1.2284826531842787 1.32490285807134 1.4874435084516013 1.4728381878856658 1.280959807880485 1.2443904993529875 1.3879169294568399 1.0 8.202160558811823 -10.087787253392994 0.7744607958300501 1.0138784233537925 1.3052012874749577 0.0 0.22904233255881606 0.6717995934614376 0.799162897869718 0.10011191860123209 0.04122729212420983 8.169824862441258e-11 10.087787253392994 0.29132286412116515 HMDPPPAPVQDRS(ph)PS(ph)PR ddPTM_A549_MK2206_60min_R1 2 HMDPPPAPVQDRSPSPR 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR 42.123000000000005 0.031785 32120000.0 1278.9 1784.52 1579.34 1702.2800000000002 1761.5900000000001 1331.53 1576.9499999999998 1386.72 2349.1000000000004 2561.1000000000004 2409.1099999999997 True False 1494.7470538969824 1875.3444456988066 1803.3141603575987 2119.338676418253 1502.4624445641628 1472.4316208019193 1863.4614026285712 1583.2918066518903 1817.0326007418662 1982.5457312388003 1810.8614989464754 0.8254342227534229 1.0356089887547149 0.9958321834147628 1.1703482997740267 0.8296948416200061 0.8131111195740546 1.029046894924155 0.8743307025816272 1.0034078264952793 1.0948080415825328 1.0 10.822460492781117 HMDPPPAPVQDRS(ph)PS(ph)PR ddPTM_A549_PD325901_60min_R1 3 HMDPPPAPVQDRSPSPR 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR 61.739 0.0018401 67724800.0 6446.9800000000005 7889.6 7179.69 8756.11 9467.380000000001 11952.3 11595.349999999999 8628.98 13561.73 10148.79 10079.37 True False 7101.472663584169 8554.484280553612 7666.946938383276 9296.955028131364 8802.423889487918 11854.964431572438 12036.61738946899 8456.868224596145 12991.777650286458 9507.993667396664 8839.671388390778 0.8033638753710459 0.9677378156600137 0.8673339314912032 1.051730841526659 0.9957863253885458 1.3411091782372897 1.3616589192757538 0.9566948648908632 1.4697127392482803 1.0756048782405645 1.0 13.109777023605616 -6.843537360198556 1.7332781919989804 1.2223527290091443 0.8975396145368488 0.40145362273187035 0.15876650897207226 0.30625206256951715 1.8608668102166357 0.02921149293815016 0.06766647520805567 1.4337143754195541e-07 6.843537360198556 -0.32481311447229544 HMDPPPAPVQDRS(ph)PSPR ddPTM_A549_MK2206_60min_R1 8 HMDPPPAPVQDRSPSPR 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HMDPPPAPVQDRS(0.72)PS(0.28)PR;HMDPPPAPVQDRS(0.816)PS(0.184)PR;HMDPPPAPVQDRS(0.5)PS(0.5)PR;HMDPPPAPVQDRS(0.949)PS(0.051)PR;HMDPPPAPVQDRS(0.953)PS(0.047)PR;HMDPPPAPVQDRS(0.847)PS(0.153)PR;HMDPPPAPVQDRS(0.624)PS(0.376)PR;HMDPPPAPVQDRS(0.952)PS(0.048)PR 126.04 4.1448e-11 266339300.0 14197.000000000002 18289.800000000003 15725.099999999999 15120.6 25672.399999999998 20580.3 17555.1 19407.200000000004 25708.8 24655.099999999995 21564.500000000004 True False 16593.10651667484 19220.672697947935 17955.15563655657 18825.147678789523 21896.023968022626 22758.093685902506 20744.634433104955 22158.230032057338 19885.79784851749 19085.495786289383 16209.439500077338 1.023669357388679 1.1857703468313159 1.107697501599047 1.1613694402388006 1.3508193153697976 1.4040025064280552 1.2797872766054605 1.3669954492844503 1.2268035454540307 1.1774309522669382 1.0 13.984546584875025 -10.392772208746853 0.9169357782953073 1.0099855104983684 1.2378113435225324 0.12717020175724414 0.11967767624816163 0.4595412378726096 0.7366317589296332 0.062081464688546965 0.022099033439260195 4.0478815095122365e-11 10.392772208746853 0.22782583302416404 HMDPPPAPVQDRS(ph)PSPR ddPTM_A549_PD325901_60min_R1 6 HMDPPPAPVQDRSPSPR 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HMDPPPAPVQDRS(0.771)PS(0.229)PR;HMDPPPAPVQDRS(0.785)PS(0.215)PR;HMDPPPAPVQDRS(0.73)PS(0.27)PR;HMDPPPAPVQDRS(0.945)PS(0.055)PR;HMDPPPAPVQDRS(0.583)PS(0.417)PR;HMDPPPAPVQDRS(0.61)PS(0.39)PR 134.86 6.000600000000001e-13 380010000.0 18097.0 21415.2 23675.600000000002 23128.7 25922.599999999995 24660.899999999998 24555.4 26152.799999999996 25578.400000000005 22857.899999999998 21857.600000000002 True False 19934.19411769273 23219.934060650943 25282.368588948437 24557.307269911154 24101.88600411513 24460.069806695326 25489.86918423046 25631.16188752528 24503.428799282035 21414.64829304638 19169.253766742393 1.0399045450729785 1.2113113188024178 1.3189020760323995 1.2810778952969333 1.2573199925982819 1.2760053210382247 1.3297267329442939 1.3370975312556999 1.2782672240373876 1.1171352079547103 1.0 14.226506555471795 -10.596836708937799 0.8744681526218683 0.9993194279409945 1.264045716032579 0.4346463905863782 0.084404936470647 0.32719206296747666 0.44536536345027944 0.054781839499012136 0.014898949978530899 2.5302491699652122e-11 10.596836708937799 0.2647262880915846 HMLDS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 HMLDSPQK 8 0 Q8IX21;Q8IX21-2;A0A3B3IRS8;B1AL16 Q8IX21 FAM178A Protein FAM178A 1 HMLDS(1)PQK 72.643 0.0017088000000000001 3603300.0 730.23 1020.6 865.29 652.5 1077.8 1030.6 911.95 786.03 1175.8 1127.7 880.95 True False 853.4749715905801 1072.5441806649417 988.0011332682175 812.362529291838 919.257047753027 1139.6574079430866 1077.6395105279987 897.4521596159173 909.4831773667726 872.9517867783355 662.1858020168856 1.2888753715212042 1.619702774354549 1.4920300771459662 1.2267894098869894 1.3882161848731183 1.72105382578714 1.6273974876020054 1.3552875293950086 1.3734561728697119 1.3182882872443034 1.0 9.371092267891967 -10.12206535864175 0.6287054711383375 0.9966417989589791 1.475306375763778 0.264278284100113 0.1682778988321407 0.4270006069984467 0.3215718010844035 0.10038915387533325 0.03376010241289264 7.54978599491308e-11 10.12206535864175 0.478664576804799 HMLDS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 HMLDSPQK 8 0 Q8IX21;Q8IX21-2;A0A3B3IRS8;B1AL16 Q8IX21 FAM178A Protein FAM178A 1 HMLDS(1)PQK;HMLDS(1)PQK 75.378 0.001491 4939200.0 732.5 1194.7 1129.7 1478.8 1424.7 1537.1 1183.6 1172.8 1477.2 1260.2 1064.7 True False 806.8628607620007 1295.3815618000147 1206.3682354379623 1570.1421174015234 1324.6339869481778 1524.582367223881 1228.6425456907723 1149.4075839561983 1415.1184211013763 1180.6307569329226 933.7486496893812 0.864111408386411 1.3872914967330163 1.2919624953024245 1.6815468680183296 1.4186194404552315 1.6327545616596557 1.3158172128007788 1.2309603706935028 1.5155239277423604 1.2643988907782289 1.0 9.866890441371012 -10.899437176442463 1.0489441686767245 0.9907654511454558 1.392084373254648 0.1031324525270424 0.22162925218046023 0.521639751704197 0.9795999785018122 0.16030487277522126 0.03479381498232657 1.260557972720282e-11 10.899437176442463 0.4013189221091922 HMT(ph)QEVVTQYYR ddPTM_A549_MK2206_60min_R1 1 HMTQEVVTQYYR 12 0 H0YD75;Q9UBE8 H0YD75 NLK Mitogen-activated protein kinase;Serine/threonine-protein kinase NLK 1 HMT(1)QEVVTQYYR 55.18600000000001 0.016926 3289300.0 602.29 841.22 897.1 912.78 1181.5 978.74 882.13 816.79 1260.4 1136.0 1118.3 True False 703.9418274232648 884.0345048588695 1024.3222695916027 1136.411140976252 1007.7029151235864 1082.3096171649684 1042.40160252433 932.572483814467 974.9214124452119 879.3768110137347 840.5952464901336 0.8374325578957783 1.0516767832677076 1.2185677635801686 1.351912404598151 1.1987968279992103 1.2875514365375036 1.2400755379914763 1.1094191737442962 1.1597988645735875 1.046135836106059 1.0 9.715267487943768 -10.392469512606597 0.7177895673376816 0.9978680844599636 1.173050372377076 0.13967198795831792 0.12975702246032278 0.9961211622927618 0.9179886869112122 0.09616907444196912 0.027410507709362413 4.0507038000520084e-11 10.392469512606597 0.17518228791711243 HMT(ph)QEVVTQYYR ddPTM_A549_PD325901_60min_R1 1 HMTQEVVTQYYR 12 0 H0YD75;Q9UBE8 H0YD75 NLK Mitogen-activated protein kinase;Serine/threonine-protein kinase NLK 1 HMT(1)QEVVTQYYR 57.62 0.0036503 5937700.0 1778.5 1976.1 2132.7 1979.1 2266.7 2084.4 2213.4 2637.5 2391.3 2506.6 2084.8 True False 1959.0520107374982 2142.6328821235525 2277.437846966933 2101.344512137784 2107.4948116904857 2067.4253374806167 2297.6321482189533 2584.8929934212756 2290.8019769697535 2348.3328482209663 1828.38281663607 1.0714670871507306 1.1718732327979609 1.2456023028902952 1.1492913262026383 1.1526551182360907 1.1307398640315087 1.2566472006372422 1.4137591810106063 1.2529115654152014 1.2843770062013167 1.0 10.836352450157047 -10.755555274434698 1.092673540808133 1.0040634528922356 1.2086506343328602 0.0 0.11875919077041246 0.3846382371916249 0.8400519529160299 0.057235490006900015 0.015827592599924414 1.7556774277328758e-11 10.755555274434698 0.2045871814406246 HNDIVDS(ph)DS(ph)DAEDR ddPTM_A549_PD325901_60min_R1 1 HNDIVDSDSDAEDR 14 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 2 HNDIVDS(1)DS(1)DAEDR 50.843 0.028775 1859100.0 183.68 274.66 245.51 317.82 280.66 252.39 316.53 0.0 363.19 298.69 254.3 True False 202.32705838193075 297.80656211935394 262.17178497156266 337.45101957840967 260.9474098244372 250.33461951963773 328.5757223618622 0.0 347.92638732724635 279.8306624252458 223.0227121405183 0.9072038288838135 1.3353194356802418 1.1755385021341591 1.5130791673172477 1.1700485897598805 1.1224624484070986 1.473283681326765 0.0 1.5600491267814502 1.254718229096483 1.0 7.801046828279019 HNDIVDS(ph)DSDAEDR ddPTM_A549_MK2206_60min_R1 1 HNDIVDSDSDAEDR 14 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 HNDIVDS(0.964)DS(0.036)DAEDR 77.468 0.00022065 3464700.0 0.0 0.0 0.0 122.71 135.69 0.0 0.0 0.0 127.82 0.0 0.0 True False 0.0 0.0 0.0 152.77395550866117 115.73018074745612 0.0 0.0 0.0 98.86897408659706 0.0 0.0 0.0 HNDIVDS(ph)DSDAEDR ddPTM_A549_PD325901_60min_R1 1 HNDIVDSDSDAEDR 14 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 HNDIVDS(0.948)DS(0.052)DAEDR 51.486999999999995 0.0072927999999999995 2847600.0 0.0 130.31 0.0 0.0 192.83 98.631 0.0 0.0 0.0 102.01 0.0 True False 0.0 141.2916810229848 0.0 0.0 179.28628602738624 97.82778183700381 0.0 0.0 0.0 95.56907119086449 0.0 0.0 HNDIVDSDS(ph)DAEDR ddPTM_A549_MK2206_60min_R1 1 HNDIVDSDSDAEDR 14 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 HNDIVDS(0.388)DS(0.612)DAEDR 56.958999999999996 0.0040016999999999995 3173600.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 111.16 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 85.98243748604392 0.0 0.0 0.0 HNDIVDSDS(ph)DAEDR ddPTM_A549_PD325901_60min_R1 1 HNDIVDSDSDAEDR 14 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 HNDIVDS(0.461)DS(0.539)DAEDR 41.202 0.029699 3474800.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 209.01 88.25 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 204.84113158482697 84.54115939764176 0.0 0.0 0.0 HNGIDGLIPHQYIVVQDTEDGVVERS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 HNGIDGLIPHQYIVVQDTEDGVVERSSPK 29 1 B7ZM87;O75044;A0A075B7E9;A0A075B7E6;Q5VZB4 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 HNGIDGLIPHQYIVVQDT(0.005)EDGVVERS(0.538)S(0.457)PK 65.021 0.0024782 1968400.0 578.01 422.21 598.2 498.02 513.21 625.41 499.32 981.25 735.2 605.47 706.01 True False 636.6891496915279 457.7911184461238 638.7974492688232 528.7815643145166 477.1639000783843 620.3168683140249 518.3218958383878 961.6781989742664 704.302100726869 567.2405208698436 619.175245766132 1.0282858593672057 0.7393562994910743 1.0316908720703326 0.8540095359597791 0.7706443423589537 1.0018437793753856 0.8371166311680404 1.553159958428798 1.1374842672455452 0.9161227370580242 1.0 9.274203984376685 HNGS(ph)SEILNK ddPTM_A549_MK2206_60min_R1 2 HNGSSEILNK 10 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2 Q8TDM6-4 DLG5 Disks large homolog 5 1 HNGS(0.844)S(0.156)EILNK;HNGS(0.5)S(0.5)EILNK 88.021 0.00021903 15238600.0 2913.0 3788.1000000000004 3462.6 3097.4 4350.3 3374.0 3159.5 3957.3 5551.0 4941.200000000001 5532.7 True False 3404.6431839877287 3980.8981097167025 3953.6487467259867 3856.2631390475717 3710.3766328075653 3731.034440520064 3733.540252769571 4518.259393722976 4293.707363125493 3824.9794881875605 4158.777895248107 0.8186643455708309 0.9572278707803432 0.9506756182491727 0.9272587371049091 0.8921795600210118 0.8971468384457871 0.8977493741696522 1.0864392154449072 1.032444499628499 0.9197364188546953 1.0 12.021943922764791 -8.24324783434135 24.994140827503866 1.0210829663326053 0.9095075197498039 0.4870025405146836 0.05067460583160053 387.8571036716881 532894.1538326697 0.006466637626725422 0.008340616326380008 5.711526099014204e-09 8.24324783434135 -0.11157544658280139 HNGS(ph)SEILNK ddPTM_A549_PD325901_60min_R1 2 HNGSSEILNK 10 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2 Q8TDM6-4 DLG5 Disks large homolog 5 1 HNGS(0.5)S(0.5)EILNK;HNGS(0.852)S(0.148)EILNK 105.17 0.00010031 28141000.0 2669.53 2807.06 3081.7 3522.3999999999996 4343.7 4155.0 3575.4 3553.5 4024.6000000000004 4027.7999999999997 4413.3 True False 2940.538720395884 3043.620797577928 3290.842693767523 3739.9706480491786 4038.613496951498 4121.163057585859 3711.4638035339535 3482.6226548331765 3855.4600579235016 3773.484020611352 3870.4920782137224 0.7597325252123955 0.7863653344518908 0.8502388397307573 0.9662778200996136 1.0434367040005326 1.0647646279353256 0.9589126469022093 0.8997880849404678 0.9961162508573953 0.974936505322305 1.0 11.918301280920325 -6.118769239039822 2.1734795506042 0.9956646446053621 0.771129041223312 0.816493181863151 0.041030752092087175 0.09732531007695212 0.881111738814769 0.0061356509018005555 0.02188466936229148 7.607303811842854e-07 6.118769239039822 -0.22453560338205003 HNGSLS(ph)PGLEAR ddPTM_A549_MK2206_60min_R1 4 HNGSLSPGLEAR 12 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HNGS(0.02)LS(0.98)PGLEAR;HNGS(0.009)LS(0.991)PGLEAR;HNGS(0.003)LS(0.997)PGLEAR;HNGS(0.008)LS(0.992)PGLEAR 163.2 1.0692e-14 126880500.0 7383.2 9746.0 9217.1 8248.5 11651.599999999999 8785.0 7913.1 9909.9 14512.9 12717.6 11410.6 True False 8629.303658090705 10242.029771468282 10524.22337649399 10269.382870289239 9937.66507478119 9714.622868988963 9350.807841174515 11314.65867279593 11225.751322339027 9844.685327243198 8577.033103460892 1.0060942465767937 1.1941226818088824 1.2270237562971973 1.1973117914335054 1.1586366701524415 1.13263208288995 1.09021473140886 1.3191809494393099 1.3088152029877744 1.1477961211634826 1.0 13.066262973512066 -11.046257042944791 1.3796459142024964 1.0011126552593559 1.197775656913262 0.07669240360965057 0.09589070305028646 0.3614986403079107 1.2381634544468028 0.0647314245332689 0.014814228373537788 8.989653594822954e-12 11.046257042944791 0.19666300165390616 HNGSLS(ph)PGLEAR ddPTM_A549_PD325901_60min_R1 4 HNGSLSPGLEAR 12 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HNGS(0.333)LS(0.667)PGLEAR;HNGS(0.06)LS(0.94)PGLEAR;HNGS(0.008)LS(0.992)PGLEAR;HNGS(0.044)LS(0.956)PGLEAR 140.19 8.050700000000001e-10 127726400.0 10948.599999999999 12669.7 13782.300000000001 14204.1 17716.6 16168.7 14349.9 17099.199999999997 16161.0 16948.4 16435.199999999997 True False 12060.093812066667 13737.420083316021 14717.649757702598 15081.454997148363 16472.24713495198 16037.027467915408 14895.993297066576 16758.143041937095 15481.80937139137 15878.275131567967 14413.774591316735 0.8367061476965242 0.9530758231498799 1.0210822754623154 1.046322384299936 1.1428128718535204 1.1126181671785382 1.0334554077209133 1.1626477808271454 1.0740982019184655 1.1016042349610136 1.0 13.815160568711216 -5.418779179881941 1.5123863648333147 1.0582331393003013 0.7903809512370488 0.6827605524790636 0.04997239433922773 0.4445021473147804 1.1591595726073822 0.008187992359485714 0.16131489711333435 3.812596282884097e-06 5.418779179881941 -0.2678521880632525 HNGSLS(ph)PGLEARDPLEAR ddPTM_A549_MK2206_60min_R1 4 HNGSLSPGLEARDPLEAR 18 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HNGS(0.005)LS(0.995)PGLEARDPLEAR;HNGS(0.104)LS(0.896)PGLEARDPLEAR;HNGS(0.007)LS(0.993)PGLEARDPLEAR;HNGS(0.016)LS(0.984)PGLEARDPLEAR 160.3 2.566e-23 48962000.0 3581.56 5771.11 5197.33 4809.610000000001 6254.41 3681.8500000000004 3905.98 3533.71 8156.55 8381.880000000001 7365.3099999999995 True False 4186.0397672650515 6064.834848596171 5934.389545665505 5987.964665911594 5334.394574166827 4071.4609231857685 4615.646006175944 4034.624214033008 6309.104448333855 6488.4074865315215 5536.300254785161 0.7561077930422856 1.0954671115162484 1.0719052928056538 1.0815823547026822 0.9635305761381309 0.7354118699878505 0.8337058674132654 0.7287582010288879 1.1395885623943065 1.1719753604265648 1.0 12.434706472640869 -8.79940023194679 24.999985677320495 1.0659168163326391 0.9193666024277448 0.2733249782216953 0.13742010502272534 209.74845166264504 138133.73050258675 0.025319751201476927 0.02695519893550929 1.5870834689255168e-09 8.79940023194679 -0.1465502139048943 HNGSLS(ph)PGLEARDPLEAR ddPTM_A549_PD325901_60min_R1 3 HNGSLSPGLEARDPLEAR 18 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HNGS(0.004)LS(0.996)PGLEARDPLEAR;HNGS(0.009)LS(0.991)PGLEARDPLEAR;HNGS(0.162)LS(0.838)PGLEARDPLEAR 83.245 6.667399999999999e-05 56765000.0 3298.17 3734.7999999999997 3794.79 4526.610000000001 4636.700000000001 4656.200000000001 4065.3 5316.5 4634.9 4420.7 4535.1 True False 3632.9977904155726 4049.54470328174 4052.327269326039 4806.208419022797 4311.034187746628 4618.281450958192 4220.0072161175185 5210.458236786435 4440.11127129892 4141.576247558619 3977.311450367538 0.9134305512030878 1.0181613267695009 1.018860936563459 1.208406351626967 1.0839066141899074 1.161156602541504 1.061020055577381 1.310045316241187 1.1163599649428047 1.0413004611886507 1.0 11.957577824000978 -6.0210812400437845 12.697440775821844 1.093302875028571 0.9789321230073252 0.3059745187478373 0.08724647639176936 1.7898837639367302 1080.3647158623596 0.013414122988982681 0.03663468307851766 9.526179486284093e-07 6.0210812400437845 -0.11437075202124569 HNGVGGS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 HNGVGGSPPK 10 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 HNGVGGS(1)PPK;HNGVGGS(1)PPK 47.18899999999999 0.010348 136606000.0 5158.8 5064.299999999999 4619.3 4539.3 6113.0 5485.4 4906.7 5086.5 7239.799999999999 7207.8 6874.1 True False 6029.4793194493295 5322.051238625774 5274.386199893532 5651.428703776921 5213.7857978421325 6065.86138708617 5798.18387664645 5807.526951752944 5599.996859584927 5579.552973965491 5167.071254491483 1.166904620138187 1.0299937772291363 1.020769008228552 1.0937392626169824 1.0090408165573568 1.1739457592758011 1.12214126553923 1.123949461061669 1.0837854915813523 1.079828920322215 1.0 12.335131063488282 -10.383177134338892 0.8899315046845914 1.0032782687747648 1.0887472691889304 0.04922727458369969 0.05706873133025289 0.5656964556479583 0.8507560778566872 0.028352538403338495 0.009929458432784906 4.138308524915093e-11 10.383177134338892 0.08546900041416561 HNGVGGS(ph)PPKSK ddPTM_A549_PD325901_60min_R1 3 HNGVGGSPPKSK 12 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 HNGVGGS(1)PPKSK;HNGVGGS(0.998)PPKS(0.002)K;HNGVGGS(0.999)PPKS(0.001)K 113.59 1.3362e-05 34229800.0 5004.3 4912.4 5358.71 6494.799999999999 7335.8 9873.6 7378.6 8398.599999999999 8496.0 6966.5 7055.200000000001 True False 5512.33285202905 5326.385188069297 5722.384285140978 6895.969045238986 6820.558715136127 9793.192675181648 7659.396660724843 8231.083334425759 8138.942665635851 6526.63400108967 6187.455126597654 0.89088853805719 0.8608361723987419 0.9248364906183314 1.1145081304259783 1.102320513940697 1.5827496886537762 1.2378912661200303 1.3302857420400964 1.315394212824179 1.0548171853455564 1.0 12.595130441894055 -6.351548627982017 2.018462434168029 1.203273842158409 0.873903716146331 0.49311271470169715 0.14970576818499248 0.27493628450601015 2.1550269998788347 0.025718521202120762 0.07772180556865016 4.450936229673136e-07 6.351548627982017 -0.32937012601207805 HNIAGTTHSGAEKDVDVSEDS(ph)PPPLPER ddPTM_A549_MK2206_60min_R1 2 HNIAGTTHSGAEKDVDVSEDSPPPLPER 28 1 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 HNIAGTTHSGAEKDVDVS(0.034)EDS(0.966)PPPLPER;HNIAGTTHSGAEKDVDVS(0.006)EDS(0.994)PPPLPER 192.94 1.8362e-67 36467000.0 4736.7 6432.5 6160.299999999999 6347.4 7809.8 5956.0 5510.700000000001 6008.4 8529.3 8728.3 8290.8 True False 5536.139158803533 6759.886774571074 7033.9231717368675 7902.513284945615 6660.988765579499 6586.259966727177 6511.922858343812 6860.109099953284 6597.427168493292 6756.570967932381 6231.965545560579 0.8883455979225163 1.084711833714576 1.1286845410670754 1.2680611321054354 1.0688423607098632 1.0568511521086608 1.04492279534226 1.1007938105242208 1.0586430750075397 1.0841797693739677 1.0 12.60547154190854 -9.779687704528538 0.5600330335690249 1.0003790466846711 1.0893735855420306 0.0 0.08727092141722433 1.3245801842152038 0.8708294034966252 0.051809241608350966 0.02218349579980969 1.6607807238148764e-10 9.779687704528538 0.08899453885735942 HNIAGTTHSGAEKDVDVSEDS(ph)PPPLPER ddPTM_A549_PD325901_60min_R1 2 HNIAGTTHSGAEKDVDVSEDSPPPLPER 28 1 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 HNIAGTTHSGAEKDVDVS(0.002)EDS(0.998)PPPLPER;HNIAGTTHSGAEKDVDVS(0.063)EDS(0.937)PPPLPER 240.95 1.4962999999999995e-120 51522000.0 6428.6 7808.8 7079.3 8918.7 10024.2 8760.2 7304.2 8017.8 8015.099999999999 8709.5 9745.7 True False 7081.226739514813 8466.874980985982 7559.743869289166 9469.587843162682 9320.134773612639 8688.85983563506 7582.1653280116 7857.878689157579 7678.253220261055 8159.580683627433 8547.040683082374 0.8285004134274303 0.9906206481203408 0.8844867071070085 1.1079376118925415 1.090451668500946 1.016592778461134 0.8871100079141304 0.9193683498794043 0.8983522490373822 0.9546673505109363 1.0 13.06120927414943 -7.734240328821528 24.954373411827138 0.9433896089334683 0.9922393660235402 0.09244422893678139 0.08042684164620892 493.5614957559229 452827.75044085836 0.013136003437249367 0.0194812048692494 1.8439947114896143e-08 7.734240328821528 0.04884975709007189 HNKS(ph)PTLSCR ddPTM_A549_PD325901_60min_R1 2 HNKSPTLSCR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 HNKS(0.999)PT(0.001)LSCR;HNKS(0.994)PT(0.006)LSCR 61.641000000000005 0.0031285 13493600.0 891.1099999999999 1184.4 1215.63 1305.05 1237.74 1240.12 1527.84 1526.37 1232.31 1228.05 1590.0 True False 981.5748311994895 1284.2135446521618 1298.1299619770298 1385.6599745164044 1150.805412371192 1230.020873880475 1585.9827872661276 1495.9253529358994 1180.5202961734612 1150.5107134196753 1394.440079840441 0.70392040890836 0.9209528349178747 0.9309327670254346 0.993703490418146 0.8252813649066032 0.8820894433995473 1.1373617340715019 1.0727785112911203 0.846590910029309 0.8250700263515967 1.0 10.445470226647993 HNLDVVS(ph)PIPANK ddPTM_A549_MK2206_60min_R1 1 HNLDVVSPIPANK 13 0 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HNLDVVS(1)PIPANK 50.07899999999999 0.0089229 6804100.0 1836.0 1860.4 2126.7 1811.3 3007.3 2338.0 2071.4 2134.4 3175.3 2669.9 2806.6 True False 2145.871914109671 1955.0864135891215 2428.2980389482327 2255.0685813123455 2564.93015374622 2585.4056081612034 2447.7465673641063 2436.957736325859 2456.0996199121546 2066.7677356739173 2109.6437617805664 1.0171726397534187 0.926737702833299 1.1510464861132375 1.0689333536620602 1.2158119774598277 1.225517622927526 1.1602653546104755 1.1551513011225343 1.1642248157760886 0.9796761771425991 1.0 11.042783688095597 -5.762939201757327 24.999984712561048 1.1118650785981254 0.9719551560859986 0.3497334986372538 0.07870252748152742 36.11266495303602 602003.7475856971 0.01214218285751421 0.04093837707435729 1.726079514346187e-06 5.762939201757327 -0.13990992251212686 HNLDVVS(ph)PIPANK ddPTM_A549_PD325901_60min_R1 2 HNLDVVSPIPANK 13 0 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HNLDVVS(1)PIPANK;HNLDVVS(1)PIPANK 58.81399999999999 0.0032825000000000003 17286500.0 3184.7 3528.5 3818.8999999999996 3508.3 4391.3 4012.7 3700.6 3660.5 4118.5 3623.1 3994.2000000000003 True False 3508.0083995477735 3825.8590782718284 4078.073518911248 3724.9997230726017 4082.870237162586 3980.0219016064457 3841.4283580460196 3587.4884558933004 3945.4137674695485 3394.3368476778846 3502.9387213199298 1.00144726432038 1.092185556940094 1.1641863713147125 1.0633927737305657 1.165555712497344 1.1361951259332188 1.0966301907212768 1.0241368009262553 1.126315382983032 0.9689969245019726 1.0 11.774350035228236 -10.917152096737398 0.8562953199958101 0.9911604907845503 1.101121484733279 0.4091406677136149 0.050920259885114706 0.6703896198790342 0.749364790055621 0.05169982061151908 0.008854443885422909 1.2101742373335439e-11 10.917152096737398 0.10996099394872882 HNLDVVS(ph)PIPANKDLSEADLR ddPTM_A549_MK2206_60min_R1 2 HNLDVVSPIPANKDLSEADLR 21 1 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HNLDVVS(0.999)PIPANKDLS(0.001)EADLR;HNLDVVS(1)PIPANKDLSEADLR 55.358000000000004 0.002938 3623400.0 1144.67 1355.0900000000001 1118.48 950.3199999999999 1620.2 1193.76 1019.76 1147.5 1949.58 1888.1999999999998 1878.63 True False 1337.8623115054015 1424.058292942639 1277.0972824577143 1183.1484426614861 1381.8707262659614 1320.0828908462438 1205.0371920127545 1310.161639071366 1508.0032428395245 1461.6543085881458 1412.1143234496635 0.9474178466210361 1.0084582170824508 0.9043866075502193 0.8378559887213416 0.9785827558849344 0.9348272083391977 0.8533566808308842 0.9278013949116835 1.0679045016380921 1.0350821348638832 1.0 10.463641177235246 -8.747392383142746 24.128796036384458 1.032066009851056 0.9231842201636346 0.505516473143697 0.048539268940815616 96.59792492716487 165927.77249319994 0.00884095472846906 0.009998088834916107 1.7889887801887303e-09 8.747392383142746 -0.10888178968742135 HNLDVVS(ph)PIPANKDLSEADLR ddPTM_A549_PD325901_60min_R1 2 HNLDVVSPIPANKDLSEADLR 21 1 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HNLDVVS(1)PIPANKDLSEADLR;HNLDVVS(1)PIPANKDLSEADLR 65.581 0.00056849 6317000.0 2482.6000000000004 2489.1000000000004 2105.3 2541.5 2588.8 2825.3 2698.8 3019.2 2759.7 2881.0 2830.3 True False 2734.631724406475 2698.8651924972105 2248.178318197347 2698.482682834712 2406.9716188751627 2802.291693525231 2801.5043108400264 2958.979687483419 2643.719406115262 2699.0931683254635 2482.1910427499365 1.1017007463603075 1.087291488050504 0.9057233224509043 1.0871373864298346 0.9696963599580793 1.1289589097947375 1.1286416970292237 1.1920837826427995 1.0650749118755878 1.0873833326443836 1.0 11.27739844196001 -5.54578074359634 24.999618301424622 1.0468968751329504 1.0980988212363914 0.0 0.07756915204959969 483.0181300559516 527258.4916041036 0.010861326544314015 0.04207228956751972 2.845897514761998e-06 5.54578074359634 0.051201946103440976 HNQGDS(ph)DDDVEETHPMDGNDS(ph)DYDPKK ddPTM_A549_PD325901_60min_R1 2 HNQGDSDDDVEETHPMDGNDSDYDPKK 27 1 B4DV59;Q9P2K3-2;Q9P2K3-4;Q9P2K3;Q9P2K3-3 B4DV59 RCOR3 REST corepressor 3 2 HNQGDS(1)DDDVEETHPMDGNDS(0.999)DY(0.001)DPKK;HNQGDS(1)DDDVEETHPMDGNDS(1)DYDPKK 135.76 1.0782e-24 60270000.0 6158.7 7919.1 8844.8 6621.9 8887.8 9865.9 9714.7 6509.2 9127.0 8960.3 8480.4 True False 6783.926690204683 8586.470349083867 9445.061316103123 7030.919723573945 8263.55158924547 9785.555381428723 10084.398224587823 6379.368899631382 8743.423929997469 8394.545128825632 7437.36456168482 0.9121412072703196 1.1545044320294466 1.2699473365553955 0.9453509593701023 1.111085992989631 1.315728884911883 1.355910166961529 0.8577458919381297 1.1756078188019845 1.1286988904741786 1.0 12.860575775974766 -10.974830383850504 0.9408481726628265 0.9900074076446539 1.1314451343741423 0.0 0.15942625281454909 1.446528634517295 1.9880495482641243 0.1537632888417229 0.026439065806867116 1.0596675034663245e-11 10.974830383850504 0.1414377267294884 HNQGDS(ph)DDDVEETHPMDGNDSDYDPK ddPTM_A549_MK2206_60min_R1 1 HNQGDSDDDVEETHPMDGNDSDYDPK 26 0 B4DV59;Q9P2K3-2;Q9P2K3-4;Q9P2K3;Q9P2K3-3 B4DV59 RCOR3 REST corepressor 3 1 HNQGDS(0.998)DDDVEET(0.001)HPMDGNDS(0.001)DYDPK 51.9 0.0090501 3090600.0 480.0 517.2 475.89 494.15 862.35 572.84 645.55 619.53 845.88 453.12 610.46 True False 561.0122651267113 543.523270860188 543.3783579043004 615.2167721832368 735.499457348137 633.4575485795826 762.8380788654518 707.3502747310527 654.2895305927925 350.7598772944928 458.8659341611079 1.2226060453852299 1.1844925290735504 1.184176722331103 1.340733156206 1.602863500191546 1.3804850206142687 1.662442168996619 1.5415183871171878 1.425883862546814 0.764406008774103 1.0 8.841928895977752 -10.599667812160963 0.9511108124683337 1.0069043041037418 1.3958866283387033 0.5389633956512938 0.1731114799674505 0.4154681978247842 0.6877370745475936 0.10520721100499751 0.030905360011545337 2.513808485233752e-11 10.599667812160963 0.3889823242349615 HNQGDS(ph)DDDVEETHPMDGNDSDYDPK ddPTM_A549_PD325901_60min_R1 1 HNQGDSDDDVEETHPMDGNDSDYDPK 26 0 B4DV59;Q9P2K3-2;Q9P2K3-4;Q9P2K3;Q9P2K3-3 B4DV59 RCOR3 REST corepressor 3 1 HNQGDS(1)DDDVEETHPMDGNDSDYDPK 57.78 0.002907 4390500.0 712.27 654.94 1112.0 672.2 819.22 835.53 695.68 760.95 748.66 658.58 803.56 True False 784.5791260545396 710.1340923121302 1187.4670069992158 713.7202673230356 761.6808133555737 828.7257206990884 722.1544830907034 745.7722552962738 717.1964237352798 616.9971464060341 704.7272141865311 1.113308965881475 1.0076722993191631 1.68500234288513 1.0127610413724197 1.0808165174021047 1.175952487737669 1.0247290987964592 1.0582424522332674 1.0176936682701292 0.8755120193821887 1.0 9.460921116935053 -7.374230422984506 0.8605656869894611 1.0092169481054054 1.2199830581410054 0.21754920940215328 0.17672002466789774 0.6871054487493489 1.0084901398042918 0.02968644903346914 0.0678627665496828 4.224444190813042e-08 7.374230422984506 0.21076611003559997 HNQGDS(ph)DDDVEETHPMDGNDSDYDPKK ddPTM_A549_MK2206_60min_R1 5 HNQGDSDDDVEETHPMDGNDSDYDPKK 27 1 B4DV59;Q9P2K3-2;Q9P2K3-4;Q9P2K3;Q9P2K3-3 B4DV59 RCOR3 REST corepressor 3 1 HNQGDS(0.999)DDDVEET(0.001)HPMDGNDSDYDPKK;HNQGDS(1)DDDVEETHPMDGNDSDYDPKK;HNQGDS(1)DDDVEETHPMDGNDSDYDPKK;HNQGDS(1)DDDVEETHPMDGNDSDYDPKK;HNQGDS(1)DDDVEETHPMDGNDSDYDPKK 145.01 5.5663e-33 63395700.0 6317.92 8603.46 8914.91 7739.7 12100.8 9138.54 7722.42 8605.58 12347.899999999998 12160.199999999999 10525.0 True False 7384.230437686149 9041.339365651189 10179.178290497015 9635.926847448332 10320.788349832832 10105.574237128103 9125.48375337642 9825.447318483448 9551.120365544453 9413.202374374314 7911.352024777475 0.9333714913152089 1.14283112890625 1.2866547030920834 1.2179873702079849 1.3045543059529232 1.2773511032600455 1.1534670338011024 1.2419428800173775 1.2072677761817963 1.1898348531190637 1.0 12.949708552401866 -10.574082398921968 0.7879907174965904 0.9948818597898076 1.2039215849441056 0.007526273340582201 0.11147983307906709 0.5910387704367127 0.6332278808443582 0.07454365599730277 0.01883174324946171 2.666352728012537e-11 10.574082398921968 0.20903972515429803 HNS(ph)HDALDR ddPTM_A549_MK2206_60min_R1 2 HNSHDALDR 9 0 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 HNS(1)HDALDR;HNS(1)HDALDR 104.59 0.00018544 43453000.0 809.25 952.03 617.7 747.0 1138.0 1037.85 912.7 1085.53 1302.0 1332.48 1623.71 True False 945.8316157370648 1000.4842605510917 705.2991482852892 930.0150335341045 970.6017074994842 1147.674598130927 1078.5257758198406 1239.4072017961996 1007.0990788667605 1031.4718425524495 1220.4979948837463 0.7749554851396181 0.8197344565456569 0.5778781704204845 0.7619963633145415 0.7952505547474783 0.9403330467906621 0.8836768108927302 1.0154930257908816 0.8251542264620334 0.8451237502038652 1.0 10.253254209626585 -7.064907982304926 2.5200058478442275 0.9226231668617525 0.728709200193829 0.5562633948320044 0.07780219731339309 0.17711585865339424 2.21994170933624 0.012822287845800064 0.024614408161197667 8.611761976396073e-08 7.064907982304926 -0.1939139666679235 HNS(ph)HDALDR ddPTM_A549_PD325901_60min_R1 2 HNSHDALDR 9 0 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 HNS(1)HDALDR;HNS(1)HDALDR 66.498 0.0016419 54677000.0 778.0699999999999 839.53 817.5799999999999 938.64 1034.69 828.3299999999999 686.02 888.47 757.02 925.67 962.27 True False 857.05909361514 910.2801394307911 873.0658953079304 996.6176609938913 962.0169438867197 821.5843551119359 712.1268665045485 870.7487688587684 725.2050820079629 867.22303822417 843.9168903321138 1.015572864382243 1.0786371855557493 1.0345401369610523 1.1809429013817745 1.1399427537326916 0.9735370443748446 0.8438353049484519 1.0317944561058556 0.8593323469596239 1.027616638746126 1.0 9.720957117842804 -7.40697702011624 5.2125577791655715 0.9337329801282018 1.090517683790195 0.45711914711625734 0.07145505162931992 0.14420863101012507 5.66417913166999 0.011031746570027782 0.017731001717681917 3.917626059481119e-08 7.40697702011624 0.15678470366199326 HNS(ph)ISEAK ddPTM_A549_MK2206_60min_R1 2 HNSISEAK 8 0 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 HNS(0.997)IS(0.003)EAK;HNS(0.999)IS(0.001)EAK 89.266 0.00081914 24861000.0 3631.7 5268.5 4690.1 3772.5 6225.5 5136.8 4001.1 5668.6 7662.0 8191.099999999999 6518.7 True False 4244.642173459747 5536.644146417058 5355.226704505156 4696.762669353962 5309.737196869981 5680.372766468127 4728.048078922719 6472.141409359425 5926.569233699785 6340.724821033983 4899.926883032489 0.8662664310682129 1.1299442376557494 1.0929197174450263 0.9585372968763992 1.08363600592829 1.1592770467939375 0.9649221696133969 1.3208648953051145 1.2095219735262506 1.294044783196807 1.0 12.258544506079023 -6.987116174234067 23.351908654645225 1.1127057625374546 1.0255024721784713 0.1864858078448347 0.12343291379974147 200.31540984737643 363065.09253970254 0.017564972019124325 0.03317525916895838 1.030110527924939e-07 6.987116174234067 -0.08720329035898322 HNS(ph)ISEAK ddPTM_A549_PD325901_60min_R1 2 HNSISEAK 8 0 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 HNS(0.977)IS(0.023)EAK;HNS(0.974)IS(0.026)EAK 57.885 0.004845 41454000.0 7533.299999999999 8195.9 9039.0 8377.0 12231.0 10543.4 10037.3 10177.099999999999 11945.2 10900.9 9388.400000000001 True False 8298.07507027765 8886.597256513554 9652.440895922591 8894.428264452645 11371.936754659337 10457.538046053125 10419.274944121315 9974.109756719496 11443.184784551962 10212.615313640767 8233.686317971062 1.0078201609607171 1.079297524016361 1.1723109823670252 1.0802486178079713 1.381147679847682 1.2700918692066547 1.2654447281262013 1.2113783998486485 1.3898009157302682 1.2403454442210704 1.0 13.0073227714403 -5.67106230049651 1.26092419320222 1.210875920550484 0.9876957144692569 0.3096395082879537 0.10788446342758776 1.1221971468670815 2.3979188885040097 0.02229211218923673 0.26654487393521975 2.132738945119127e-06 5.67106230049651 -0.22318020608122713 HNS(ph)TDLPM ddPTM_A549_MK2206_60min_R1 3 HNSTDLPM 8 0 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 HNS(0.848)T(0.152)DLPM;HNS(0.911)T(0.089)DLPM;HNS(0.905)T(0.095)DLPM 80.688 0.0013706 14787900.0 2098.35 2239.42 2428.39 2061.64 2928.57 2582.4799999999996 2125.42 2391.27 2772.54 3780.22 3328.0499999999997 True False 2452.5001802679894 2353.3969126638112 2772.772217426766 2566.7418925505353 2497.7812324532215 2855.7563194885156 2511.581302117899 2730.23984545724 2144.5641168365973 2926.2656765231877 2501.603335492702 0.980371326449706 0.9407554264394594 1.1083980334079047 1.026038723299433 0.9984721386539374 1.1415703996597293 1.0039886286061543 1.0913959886128417 0.8572758464179996 1.1697560660418795 1.0 11.288637332644798 -8.754543389337158 24.99995886357399 0.9326024821429687 1.0364065093200596 0.0 0.09563707141819819 147.20183086121614 533648.5888042735 0.012341314615373477 0.013845209900264518 1.7597728402655066e-09 8.754543389337158 0.10380402717709092 HNS(ph)TDLPM ddPTM_A549_PD325901_60min_R1 1 HNSTDLPM 8 0 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 HNS(0.886)T(0.114)DLPM 85.73100000000001 0.0010375 3294000.0 1339.1 1121.6 1073.9 1058.6 1529.9 1506.3 948.74 1672.2 1952.7 1694.7 2052.2 True False 1475.0444462066823 1216.1211682555415 1146.7813118853046 1123.987317744964 1422.4451018684767 1494.033192212174 984.844819870449 1638.8466591844783 1870.6348096971674 1587.6963527806877 1799.7924099676427 0.8195636552513305 0.67570079833674 0.6371742127226339 0.624509422042274 0.7903384268044835 0.8301141753559425 0.5471991183072913 0.9105753808651421 1.0393614282053776 0.8821552663449846 1.0 10.813614798783005 -8.47530679874223 5.327461923268148 1.0170055525305053 0.705278400077667 0.6371522849695253 0.09156116924518995 0.07077896011365264 4.702695767258786 0.013297633459136596 0.015919300064419297 3.347288930136728e-09 8.47530679874223 -0.31172715245283833 HPAHPMR ddPTM_A549_PD325901_60min_R1 1 HPAHPMR 7 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 54.525 0.048496 7348500.0 514.19 464.5 318.18 346.74 468.81 439.63 493.38 492.03 391.76 351.64 359.4 False True 566.3901902733284 503.6450451628919 339.7736081717723 368.1573422963244 435.8824029066996 436.049799038862 512.1558458878955 482.2160756599318 375.2956895820977 329.437390388742 315.196078424311 1.796945549274457 1.5978785259025161 1.0779753665411265 1.1680264048232158 1.3828928490662342 1.383423934773262 1.6248801331799596 1.5298923707127525 1.1906737274722108 1.0451823894371541 1.0 8.300105775098855 -9.040452412161947 2.329728269080973 1.0704251106955316 1.429530833692787 0.40913639031712934 0.19652033250478618 0.22022309037046395 2.433710833379997 0.040976523018490585 0.04050533699814386 9.110612763784285e-10 9.040452412161947 0.3591057229972554 HPEPVPEEGS(ph)EDELPPQVHK ddPTM_A549_MK2206_60min_R1 2 HPEPVPEEGSEDELPPQVHK 20 0 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 HPEPVPEEGS(1)EDELPPQVHK;HPEPVPEEGS(1)EDELPPQVHK 61.222 0.0028066999999999996 11695500.0 2254.1 2060.6 2072.01 1711.62 2476.1000000000004 2513.3 1443.72 2652.2 3085.7 2294.0 2331.1000000000004 True False 2634.5369725460832 2165.475738465785 2365.852174580868 2130.9669768375406 2111.868970069836 2779.2557378064835 1706.0252361856258 3028.1574720218523 2386.7938768503577 1775.7838067478058 1752.223534912949 1.5035393145070204 1.23584445438542 1.350199975882874 1.216150185394815 1.2052508872247023 1.5861308117543107 0.9736344719684304 1.7281798878316585 1.362151477419195 1.0134459281966142 1.0 10.774971119041219 -10.57315609405805 0.9478754295162998 1.0069632002559084 1.3435404046625192 0.31223052062826784 0.19534901251925482 0.4992322763437971 0.8260164202580255 0.10809468279249815 0.03264525011463912 2.6720458497300498e-11 10.57315609405805 0.3365772044066109 HPEPVPEEGS(ph)EDELPPQVHKV ddPTM_A549_MK2206_60min_R1 4 HPEPVPEEGSEDELPPQVHKV 21 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV 145.13 2.6441e-22 108778000.0 8499.2 11139.7 11029.6 10236.2 15180.9 12018.6 10358.3 11319.2 16035.5 15264.7 14928.199999999999 True False 9933.657174510303 11706.663148494272 12593.763130852236 12744.069459520482 12947.809720016628 13290.400274699003 12240.269029993047 12923.73126359616 12403.484853431602 11816.393668205423 11221.115942639726 0.8852646408155236 1.0432708483128215 1.1223271549130434 1.1357221086267901 1.1538789712363229 1.184409852160612 1.0908245750746222 1.1517331546755145 1.1053699932195629 1.0530497794166505 1.0 13.45392853899472 -2.1352323176593586 17.91032864861184 1.0747223597117295 0.005410559833566975 0.0 0.08221373417555734 0.0 0.0 0.011587422923953431 0.0 0.0073243262727786555 2.1352323176593586 -1.0693117998781625 HPEPVPEEGS(ph)EDELPPQVHKV ddPTM_A549_PD325901_60min_R1 4 HPEPVPEEGSEDELPPQVHKV 21 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV 110.14 7.902100000000001e-11 177168000.0 9523.9 11138.5 10654.3 11794.0 12955.800000000001 14337.400000000001 11095.600000000002 11395.3 12068.599999999999 11533.3 11605.7 True False 10490.759316875377 12077.180485569152 11377.364867510563 12522.488593882586 12045.829303083598 14220.640967949821 11517.849129745297 11168.011802060091 11561.398711687021 10805.085469714713 10178.27247459384 1.0307013634250353 1.1865648631155443 1.117809028586118 1.2303157166542933 1.183484656473031 1.3971566396405881 1.1316113965798418 1.097240404001441 1.1358900776674654 1.0615834363528263 1.0 13.313205097757862 -9.937236526226247 0.5927515100045762 1.0019573728941882 1.1822015376719892 0.26946954717116167 0.08865722565107341 0.6655535200260978 0.46953099931609515 0.055455626228880305 0.021309501839767646 1.1554827697326845e-10 9.937236526226247 0.18024416477780103 HPFS(ph)GEERVDSLVSLSEEDLESDQR ddPTM_A549_PD325901_60min_R1 1 HPFSGEERVDSLVSLSEEDLESDQR 25 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 HPFS(0.553)GEERVDS(0.437)LVS(0.01)LSEEDLESDQR 76.51 2.3987e-06 1844300.0 172.72 335.76 242.22 150.35 460.84 319.62 346.5 275.49 414.87 274.85 358.47 True False 190.25440725025626 364.0556735498225 258.65850578718556 159.63677803037535 428.4721882116925 317.01712068967305 359.6862471120755 269.9951358322758 397.4344566492874 257.49592409380574 314.38046252855526 0.6051724897916498 1.1580098541166668 0.8227562988704857 0.5077821208939646 1.3629097201699494 1.008386838481982 1.1441113236462812 0.858816523331987 1.2641830648531105 0.8190582901455504 1.0 8.296367752508049 -6.766766652456511 24.999983264226245 1.113255428948522 0.8044234669656999 0.27699899765920755 0.21621341927183088 109.52727016463629 513995.8753196167 0.02826132952587243 0.054543371517824166 1.7109343576024333e-07 6.766766652456511 -0.30883196198282203 HPFSGEERVDS(ph)LVSLSEEDLESDQR ddPTM_A549_MK2206_60min_R1 1 HPFSGEERVDSLVSLSEEDLESDQR 25 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 HPFS(0.121)GEERVDS(0.706)LVS(0.143)LS(0.031)EEDLESDQR 50.827 0.0033909 874090.0 0.0 0.0 170.24 119.82 142.63 184.7 133.5 76.80199999999999 188.51 286.56 126.99 True False 0.0 0.0 194.38259187969507 149.17590537892423 121.64931594081848 204.2448314060626 157.75522194801002 87.68891869626054 145.8127859886122 221.8258969754366 95.45487825429848 0.0 0.0 2.0363819579953395 1.562789750582565 1.274416961873192 2.1397002975787163 1.6526679917577294 0.918642612089988 1.527557194092865 2.3238822471123672 1.0 6.576747023825597 -5.7433313931611085 24.817262283922286 1.3799674042482681 1.5744262276892384e-06 0.6105868135693014 0.46680336469546757 104.23432551117412 142852.12916067868 0.05521621442845386 0.21296091932746342 1.805795667991289e-06 5.7433313931611085 -1.3799658298220405 HPFSGEERVDS(ph)LVSLSEEDLESDQR ddPTM_A549_PD325901_60min_R1 1 HPFSGEERVDSLVSLSEEDLESDQR 25 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 HPFS(0.111)GEERVDS(0.871)LVS(0.017)LSEEDLESDQR 85.44 3.2647e-07 1960100.0 168.21 196.11 273.97 352.06 304.21 245.67 351.25 242.77 205.03 317.99 283.54 True False 185.28655537034288 212.63687794810483 292.5632517154455 373.80594661372754 282.84333906752676 243.66934497162887 364.6170109613751 237.92776190061934 196.41330211103096 297.912057131487 248.6663775081499 0.7451210623127777 0.8551090826146601 1.1765291900223098 1.503242820197822 1.1374410240011508 0.9799046715257785 1.466289952888484 0.9568151685196017 0.7898667446691445 1.1980391563862434 1.0 7.95806764191558 -8.503156388197958 24.400608936720555 0.8993267314427383 1.130937334880179 0.03261577200297505 0.2359286608067594 732.1968103296522 905879.2966340076 0.03769949910829537 0.04523973966913368 3.1393780092886863e-09 8.503156388197958 0.23161060343744067 HPKGEEGS(ph)DDDETENGPKPK ddPTM_A549_MK2206_60min_R1 4 HPKGEEGSDDDETENGPKPK 20 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK 156.89 1.9879999999999997e-27 175048000.0 4517.95 6632.1 6784.9 5822.93 7687.800000000001 5973.9 5854.300000000001 6094.9 8206.199999999999 10425.6 7436.900000000001 True False 5280.469506727555 6969.6455620105435 7747.1008437766795 7249.548111401264 6556.934803967083 6606.054132846118 6917.950530713375 6958.870739848425 6347.508802608612 8070.44971910634 5590.112482001675 0.9446088113126403 1.2467809162070551 1.385857774547435 1.2968519210914675 1.1729522125141951 1.1817390355051782 1.2375333328241431 1.2448534376103704 1.1354885653992661 1.4437007743744936 1.0 12.448661597353693 -9.622845058021694 0.6781870247793219 1.0112037298701368 1.2252445554388565 0.0 0.16558830352560194 0.4835305210221222 0.479497929682633 0.044550801361590946 0.02455004937123622 2.3831695541742216e-10 9.622845058021694 0.21404082556871962 HPKGEEGS(ph)DDDETENGPKPK ddPTM_A549_PD325901_60min_R1 4 HPKGEEGSDDDETENGPKPK 20 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 HPKGEEGS(0.985)DDDET(0.015)ENGPKPK;HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK 223.69 1.2520999999999997e-75 233295400.0 13842.579999999998 17477.91 19601.75 20316.07 22200.98 29059.6 22677.55 24951.100000000002 26806.0 23038.300000000003 18450.260000000002 True False 15247.868531231197 18950.83481443049 20932.042629898282 21570.947502757346 20641.65975402313 28822.94825227968 23540.556574881524 24453.43073674071 25679.437040376022 21583.65780625912 16180.994985834512 0.9423319483492696 1.1711785851871783 1.2936190047783234 1.3331038988419077 1.2756730826561447 1.7812840482005239 1.4548275056935538 1.511243947491994 1.5870122364450905 1.3338894069959428 1.0 13.982012702829968 -5.298722786834903 1.3541643968773547 1.3513614693480422 0.7857718376117616 0.3301523648664907 0.1921933958314613 1.6357322098147278 2.7124865021495355 0.0376433228006586 1.238745944802637 5.026633406221439e-06 5.298722786834903 -0.5655896317362806 HPNQAT(ph)PK ddPTM_A549_PD325901_60min_R1 3 HPNQATPK 8 0 H3BQ37;H3BPW9;Q96F86 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 HPNQAT(1)PK;HPNQAT(1)PK;HPNQAT(1)PK 82.417 0.003152 61119600.0 5661.4 7167.790000000001 6377.51 6298.75 6931.99 5460.86 5324.83 5924.03 6560.41 6928.32 7492.129999999999 True False 6236.141160297595 7771.844818661192 6810.32617968307 6687.809482000844 6445.110936467258 5416.388566702364 5527.46931950878 5805.870574338366 6284.698782140318 6490.864692805511 6570.645506525134 0.949091098295388 1.1828129840429193 1.0364774926481601 1.0178314254450886 0.9808946366177859 0.8243312717637091 0.841236879088911 0.8836073363831164 0.9564811822368366 0.9878579945242223 1.0 12.681819393918488 -6.580273210807983 2.2905570759568072 0.9489159559452615 1.0675926270689895 0.3521116883903478 0.07644152208952584 0.3075402702940224 3.237142997265504 0.012113188398078538 0.02989315235875982 2.6286138339850015e-07 6.580273210807983 0.11867667112372804 HPPLYQAGLTPPLS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 HPPLYQAGLTPPLSPPK 17 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 HPPLYQAGLT(0.001)PPLS(0.999)PPK;HPPLYQAGLT(0.029)PPLS(0.971)PPK 89.859 1.9509000000000002e-06 69045000.0 7744.299999999999 8673.2 8521.8 8126.200000000001 10823.1 8519.3 8313.900000000001 8367.0 12579.5 13458.099999999999 11665.400000000001 True False 9051.348510043315 9114.628833767569 9730.31938134625 10117.119364798982 9231.03632727387 9420.806671346338 9824.428013135292 9553.047872862842 9730.263335333653 10417.905862943622 8768.559231338644 1.0322503699004493 1.039467099816362 1.1096828024574772 1.1537949505593361 1.05274265517673 1.0743847903400794 1.1204153104221495 1.0894660822636006 1.1096764107560453 1.188097792133313 1.0 13.098124096481378 -10.81289910153991 1.0046216719068946 0.9988163503261319 1.088994997921297 0.0 0.06545208703629471 0.40658212304267705 0.712813433180698 0.02659002719951399 0.0062643606184939185 1.5385120371172926e-11 10.81289910153991 0.09017864759516503 HPPLYQAGLTPPLS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 HPPLYQAGLTPPLSPPK 17 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 HPPLYQAGLT(0.004)PPLS(0.996)PPK;HPPLYQAGLT(0.018)PPLS(0.982)PPK 112.58 9.555e-10 108098000.0 10010.599999999999 10764.6 11089.400000000001 11624.9 13923.7 13642.199999999999 12214.8 14696.2 13817.7 12349.0 12126.099999999999 True False 11026.868742585775 11671.770620366991 11841.993369979415 12342.943670936547 12945.747346157326 13531.102446256991 12679.640898195026 14403.072762054124 13236.990121346118 11569.282032506468 10634.666573681236 1.036879592433595 1.0975210684322148 1.1135274705542797 1.160632877901689 1.2173157716289453 1.2723579392459639 1.1922932242722786 1.35435113665895 1.2447019405483888 1.08788385158574 1.0 13.37648718106267 -5.661234501981538 1.5647266812652063 1.1608058492836688 1.0362988647886917 0.18224425406639533 0.09201669702884643 1.1295892994072272 4.22224729385232 0.017697885461825463 0.17052510680041746 2.1815516414642353e-06 5.661234501981538 -0.1245069844949771 HPPS(ph)PPLRR ddPTM_A549_MK2206_60min_R1 1 HPPSPPLRR 9 1 Q5VY43 Q5VY43 PEAR1 Platelet endothelial aggregation receptor 1 1 HPPS(1)PPLRR 70.977 0.0013853 4702700.0 506.12 647.78 657.5 526.31 915.64 557.12 439.0 591.34 931.75 1076.9 738.58 True False 591.5406825540232 680.7492351079129 750.7433867534033 655.2559736269536 780.9505689409739 616.0740686136745 518.7606174919581 675.1642559027981 720.710112699005 833.6275420604677 555.1702022289928 1.065512306278334 1.2261991590591927 1.3522760835131094 1.1802794368215714 1.40668675264897 1.1097030534782926 0.9344172569225595 1.2161392185532158 1.2981786662997654 1.5015711194755708 1.0 9.116786325684194 HPPS(ph)PPLRR ddPTM_A549_PD325901_60min_R1 1 HPPSPPLRR 9 1 Q5VY43 Q5VY43 PEAR1 Platelet endothelial aggregation receptor 1 1 HPPS(1)PPLRR 44.847 0.022225 6584800.0 1297.5 1915.9 1597.8 1936.8 1702.3 1964.2 1944.1 1599.6 1742.2 1861.9 2404.0 True False 1429.2212448309842 2077.3596168516356 1706.2363163519317 2056.431737208054 1582.7363206161876 1948.2042064284344 2018.0837893523405 1567.694723138076 1668.9813926637 1744.3393162461584 2108.323240211585 0.6778947447771585 0.9853136261226992 0.8092859215367274 0.9753873115783123 0.7507085680359663 0.9240538496520668 0.9571984745326868 0.7435741793467812 0.79161551740814 0.8273585771748652 1.0 11.04188035718746 -10.913445897122068 1.1873343698664067 0.9993756537392542 0.8477191863830364 0.0 0.11039362116717419 0.5154001468723038 1.2993587943387128 0.06304500376424925 0.015216190215783989 1.2205458625812024e-11 10.913445897122068 -0.15165646735621774 HPPVLT(ph)PPDQEVIR ddPTM_A549_MK2206_60min_R1 4 HPPVLTPPDQEVIR 14 0 P05771-2 P05771-2 1 HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR 67.685 0.0032361999999999994 16759900.0 1656.42 2301.71 1951.8899999999999 1683.27 2705.3500000000004 2012.85 1625.08 1798.15 2960.08 2907.08 2741.33 True False 1935.9832004191398 2418.8572076017067 2228.697352349963 2095.6712255648627 2307.3965987554757 2225.848450978305 1920.3360006237622 2053.0432691034216 2289.6266062764375 2250.3686089452535 2060.582104140925 0.9395321819638284 1.17387082161919 1.081586289559244 1.0170287421954325 1.1197790149291091 1.0802037184081443 0.9319385996630148 0.9963414051678148 1.1111552418490034 1.092103345177528 1.0 11.008836233782594 HPPVLT(ph)PPDQEVIR ddPTM_A549_PD325901_60min_R1 2 HPPVLTPPDQEVIR 14 0 P05771-2 P05771-2 1 HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR 111.7 7.6459e-06 24695000.0 999.75 1520.3000000000002 1900.45 1586.97 1807.35 1935.1 2007.3899999999999 1660.01 2061.3 1809.03 1492.53 True False 1101.2438840229486 1648.421016493315 2029.4259653342278 1684.993532629629 1680.407971019015 1919.341187180361 2083.7823249359567 1626.899798297347 1974.6707293638403 1694.8075370690094 1308.9582719272034 0.8413132088630808 1.2593380949159778 1.5504130336762123 1.287278264530757 1.2837750500212044 1.4663119736846 1.5919394602762742 1.242896609608519 1.5085818789750236 1.2947758331315733 1.0 10.354203391232295 -10.950821829808502 1.1981893578459866 0.9989488966472052 1.3612739142170012 0.03704574064215471 0.21433949654309295 0.4690868177476057 1.1913147590941495 0.14015963650772714 0.03227322224495094 1.1198972293452444e-11 10.950821829808502 0.36232501756979596 HPRPTETAS(ph)DSEGNFETPEAETPIR ddPTM_A549_MK2206_60min_R1 4 HPRPTETASDSEGNFETPEAETPIR 25 1 E5RFM9 E5RFM9 TACC1 1 HPRPT(0.002)ET(0.012)AS(0.827)DS(0.159)EGNFETPEAETPIR;HPRPT(0.004)ET(0.017)AS(0.953)DS(0.026)EGNFETPEAETPIR;HPRPT(0.043)ET(0.192)AS(0.574)DS(0.192)EGNFETPEAETPIR;HPRPT(0.001)ET(0.026)AS(0.828)DS(0.145)EGNFETPEAETPIR 195.27 3.819699999999999e-68 150451000.0 7681.400000000001 8632.300000000001 7933.41 8039.900000000001 11371.9 9711.300000000001 8277.1 9152.6 14222.8 13265.0 11685.099999999999 True False 8977.832527800676 9071.647198465584 9058.486831792117 10009.675860924828 9699.108574264837 10738.94332016078 9780.9419294822 10450.00907866194 11001.358509144518 10268.42728705739 8783.367177646296 1.0221401822582683 1.0328211282744688 1.031322800081272 1.139617148922055 1.1042585808036247 1.2226453822278356 1.113575435440606 1.189749769912529 1.2525217592113216 1.1690764008125012 1.0 13.100558399733865 -6.258329025059764 21.692401433019683 1.1336635713449952 1.0291672928032793 0.3935256292382273 0.06444287242631985 54.97881671174639 383411.876999481 0.013144444164478812 0.03314924767834859 5.516593392849094e-07 6.258329025059764 -0.10449627854171584 HPRPTETAS(ph)DSEGNFETPEAETPIR ddPTM_A549_PD325901_60min_R1 1 HPRPTETASDSEGNFETPEAETPIR 25 1 E5RFM9 E5RFM9 TACC1 1 HPRPT(0.005)ET(0.006)AS(0.883)DS(0.105)EGNFETPEAETPIR 209.72 4.8411e-81 40076000.0 3413.5 3530.8 4057.6 3855.4 3951.5 3792.8 4495.3 3480.5 5346.3 4791.7 4373.7 True False 3760.036007114113 3828.3529073436775 4332.973136330951 4093.539301751307 3673.9602719349514 3761.9126942988337 4666.371101422546 3411.0786971005714 5121.613603259059 4489.15124424336 3835.7626271686386 0.9802577407897571 0.9980682538141235 1.1296249422841182 1.067203500226224 0.9578174222545358 0.9807470013011944 1.2165432418499318 0.8892830523296623 1.3352269420904102 1.1703412542910716 1.0 11.905297727853704 -8.75214333996916 24.999976896786304 1.158301618220604 1.0336213541160828 0.2423862291835338 0.11028849092169929 287.41975915033015 772961.4917329509 0.02361112794987399 0.026597220510310948 1.7695248258750324e-09 8.75214333996916 -0.12468026410452127 HPS(ph)SPSALR ddPTM_A549_MK2206_60min_R1 1 HPSSPSALR 9 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 HPS(0.688)S(0.312)PSALR 78.939 0.0019105999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 HQAQIDHYLGLANK ddPTM_A549_MK2206_60min_R1 1 HQAQIDHYLGLANK 14 0 Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4;F8W914;H7C106;Q9NQC3-3;Q9NQC3-6 Q9NQC3-5 RTN4 Reticulon-4;Reticulon 0 84.566 0.00022994 3481300.0 1760.8 1838.9 2010.9 1517.7 2710.9 2293.6 1736.4 1902.4 2910.4 2349.9 2373.4 False True 2057.979992573153 1932.492155423048 2296.075857676683 1889.5365681321416 2312.130201107514 2536.307229631538 2051.881403674343 2172.0710258556555 2251.1990469537795 1819.0559579235698 1784.0192774923391 1.15356376387698 1.0832238080629968 1.2870241295285234 1.059145824246989 1.296023103717523 1.4216815152337554 1.150145309280804 1.2175154457460635 1.2618692383852037 1.0196391826440794 1.0 10.800915489265785 -10.795443284145277 0.9574208379257356 0.9952845892481021 1.2173215037951846 0.3888477601198359 0.09861305735685083 0.48297092980736445 0.7584881693855041 0.07577299897655776 0.01742226860411738 1.6016097938461135e-11 10.795443284145277 0.2220369145470824 HQAS(ph)DS(ph)ENEELPKPR ddPTM_A549_MK2206_60min_R1 2 HQASDSENEELPKPR 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 HQAS(1)DS(1)ENEELPKPR;HQAS(1)DS(1)ENEELPKPR 109.03 9.949600000000002e-07 48162000.0 5796.200000000001 6551.4 5722.4 5607.4 8677.4 6802.0 5857.8 8217.5 8589.8 7808.599999999999 7687.1 True False 6774.456856515513 6884.838276708109 6533.922367083924 6981.213251725754 7400.965954882269 7521.783125197823 6922.086435408636 9382.355790038297 6644.2240150919415 6044.631836691769 5778.180916832965 1.1724203437071696 1.1915234873749343 1.1307922789418616 1.2082026077425376 1.280847045360213 1.3017562505330018 1.1979698342852596 1.6237559752941744 1.1498816168486565 1.0461132878485306 1.0 12.496399660550003 -9.379363151296708 2.020508737408836 1.046399394703122 1.2565023377154314 0.32274988360645707 0.1283039842046161 0.24618115901022794 2.0483552889430223 0.028031959451925742 0.024352270931805062 4.174811284596678e-10 9.379363151296708 0.21010294301230936 HQAS(ph)DS(ph)ENEELPKPR ddPTM_A549_PD325901_60min_R1 2 HQASDSENEELPKPR 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 HQAS(1)DS(1)ENEELPKPR;HQAS(1)DS(1)ENEELPKPR 82.265 8.5141e-05 97497000.0 9267.5 9833.3 10549.6 12391.4 13618.0 10889.7 9635.0 10442.599999999999 10717.3 11113.5 11298.8 True False 10208.32977762709 10661.986700969344 11265.559295898323 13156.788635088746 12661.518659549582 10801.017893668528 10001.665197474302 10234.31415093878 10266.889151414689 10411.791713358229 9909.119228994445 1.0301954736559376 1.0759772341594178 1.1368880558965206 1.3277455171385466 1.2777642863052365 1.0900078648831226 1.0093394747142677 1.0328177423673341 1.0361051183412342 1.0507282708732524 1.0 13.274541113977735 -7.525751782695521 5.338413880322128 1.0192068777741252 1.172960780594627 0.43044521973526184 0.0786687903480535 0.12792268784568098 11.64677157368672 0.012836797150290841 0.019739740792562934 2.980219261646393e-08 7.525751782695521 0.15375390282050172 HQAS(ph)DS(ph)ENEEPPKPR ddPTM_A549_MK2206_60min_R1 2 HQASDSENEEPPKPR 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 HQAS(1)DS(1)ENEEPPKPR;HQAS(1)DS(1)ENEEPPKPR 73.809 0.00022200000000000003 21352800.0 3482.5 3644.4 3377.3999999999996 2752.67 3914.6 3665.5 2577.91 3378.3999999999996 3998.4 4815.8 4400.4 True False 4070.2608610495267 3829.8843935090285 3856.366105583189 3427.0742735720505 3338.767525639264 4053.380777038021 3046.282877992467 3857.2985459160764 3092.7687841327615 3727.907435281642 3307.659235138318 1.2305562851849576 1.1578836032511894 1.1658897823015695 1.0361025818999576 1.0094049260487516 1.2254529529455953 0.9209784507517683 1.1661716856859876 0.93503246987395 1.1270530518013746 1.0 11.691594896106205 -4.361658535041874 0.25967802330848344 0.9646793661906623 1.588304968374019 0.15802590006667228 0.09809220845599809 9.203805870771868 0.3203480930505048 0.04097212658938529 1.9932914305725817 4.3485199309817905e-05 4.361658535041874 0.6236256021833566 HQAS(ph)DS(ph)ENEEPPKPR ddPTM_A549_PD325901_60min_R1 2 HQASDSENEEPPKPR 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 HQAS(1)DS(1)ENEEPPKPR;HQAS(1)DS(1)ENEEPPKPR 72.421 0.00032956 37627000.0 6793.0 8330.7 8793.5 9693.099999999999 10805.1 8943.0 9021.0 8800.0 10779.099999999999 8548.8 8934.9 True False 7482.620359257706 9032.757325594195 9390.27978961116 10291.82077237268 10046.187051571385 8870.171173042201 9364.299091480616 8624.477096533548 10326.091912329968 8009.027309052663 7835.9639429977005 0.9549074515515419 1.1527308434932197 1.1983566869271283 1.3134083882008618 1.282061418946263 1.1319821323282988 1.195041115502918 1.1006274606764201 1.3177819586009545 1.0220857787649233 1.0 12.935895043755835 -11.059783468973237 1.371882629592649 1.0001189768972791 1.2016574898086259 0.28905056902883797 0.10051502894707784 0.40541456200205467 1.3625288884879723 0.07485639196878413 0.016654562328155802 8.713979442247792e-12 11.059783468973237 0.20153851291134672 HQAS(ph)INELK ddPTM_A549_PD325901_60min_R1 1 HQASINELK 9 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 HQAS(1)INELK 102.4 0.0002133 12177000.0 1417.7 1393.1 1733.0 1726.8 2190.8 1850.3 1824.0 2125.4 1583.0 2083.5 1985.7 True False 1561.6238603444215 1510.501426084875 1850.6118013755777 1833.4605141526595 2036.9257658496997 1835.2317702650093 1893.4133181310976 2083.007229655955 1516.4720150307855 1951.9474544276643 1741.4714883894105 0.896726630757923 0.867370747184528 1.0626713177412423 1.0528225850245325 1.1696578321437454 1.0538396881606786 1.0872491055723281 1.196119054227188 0.8707992207402061 1.1208609887911005 1.0 10.766091137778554 -8.793433379551136 24.99963227618853 0.9389885354888462 1.0484329234590113 0.0 0.1109925432831372 245.08223809209812 191502.51317043212 0.018601572363156807 0.01980360553232901 1.6090391843663832e-09 8.793433379551136 0.10944438797016509 HQAS(ph)INELKR ddPTM_A549_MK2206_60min_R1 2 HQASINELKR 10 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 HQAS(1)INELKR;HQAS(1)INELKR 144.28 9.5897e-09 86924000.0 3476.7000000000003 7619.6 6802.6 4247.0 8549.1 7254.0 4489.9 6681.7 7349.6 7322.1 5193.1 True False 4063.481962845913 8007.405094057019 7767.31096992959 5287.5151906550755 7291.538714924292 8021.613465184507 5305.656711793036 7628.85143684805 5684.927334899497 5668.0325245807 3903.509947731298 1.0409815825389634 2.0513346196827 1.9898273794444703 1.3545540453222504 1.8679441867855624 2.054974515908851 1.359201534730726 1.9543568580584516 1.456362968462153 1.4520348610549678 1.0 11.930556230914673 -9.68878981758507 0.6996938082598974 1.037414722298879 1.7331681902923328 0.18064227124967314 0.34449529982177113 0.42194476582702956 0.44047720688796066 0.1296537572490817 0.06913316471025355 2.0474352796942805e-10 9.68878981758507 0.6957534679934538 HQEGEIFDTEKEK ddPTM_A549_PD325901_60min_R1 1 HQEGEIFDTEKEK 13 1 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 79.61399999999999 0.0026677 18019000.0 2021.5 1901.5 2326.6 2376.1 2599.6 2451.5 2230.7 3160.0 2490.1 2335.2 2715.4 False True 2226.721191850353 2061.7460783148313 2484.4970669823515 2522.8663004853684 2417.0130641331384 2431.535796792233 2315.5905091858763 3096.9713210279574 2385.4497565560073 2187.755073472274 2381.423014338826 0.9350380753200943 0.8657622211177173 1.0432825466214548 1.059394439918862 1.0149448668212329 1.021043209102991 0.972355812152413 1.3004708959226192 1.0016908974982337 0.9186755399185887 1.0 11.217608195267513 -5.766566856130702 24.989810673162385 1.0272186828242034 0.9004001358707246 0.23830512874865162 0.09280112663090014 118.65554695296666 578305.8348602159 0.011860100808731622 0.03855923863938872 1.7117216506851176e-06 5.766566856130702 -0.12681854695347872 HQEGEIFDTEKEKYEITEQR ddPTM_A549_MK2206_60min_R1 1 HQEGEIFDTEKEKYEITEQR 20 2 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 116.39 1.0653e-14 9066700.0 630.07 786.81 1016.7 633.93 1153.6 825.71 622.32 829.86 1479.5 950.11 992.64 False True 736.410412267473 826.8552682627702 1160.8833480033245 789.2428784581991 983.9069681646797 913.0860841380618 735.3874885594429 947.4951963396628 1144.3956122760162 735.4794911199475 746.1400925297023 0.9869599819663329 1.1081769717794046 1.5558517222516255 1.0577676851304985 1.318662511256909 1.2237461748535028 0.9855890280150957 1.2698623299108471 1.533754349529824 0.9857123326886091 1.0 9.543302720822112 HQEGEIFDTEKEKYEITEQR ddPTM_A549_PD325901_60min_R1 1 HQEGEIFDTEKEKYEITEQR 20 2 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 83.06299999999999 3.6033e-05 6508300.0 764.17 744.88 847.34 1044.9 908.45 1208.2 860.33 1123.4 935.36 1034.2 907.8 False True 841.7479758477792 807.6536517565871 904.845587869349 1109.441099859922 844.6436059823627 1198.3608197774338 893.0703289406397 1100.9929057097484 896.0500720020191 968.9004355023244 796.146355018334 1.0572779370802936 1.0144537454272313 1.136531722045643 1.393514010165095 1.0609149946593825 1.5052016657789475 1.1217414025842944 1.3829026519682983 1.1254841102442583 1.2169878432464998 1.0 9.636889854526805 -9.526399105896717 1.322193467523783 1.0298983771173291 1.2068579829118768 0.0068902279948714895 0.1621077068774235 0.43920920941538555 1.5754859623230593 0.03703634614018384 0.028519247644986836 2.975780503751319e-10 9.526399105896717 0.17695960579454773 HQGVMVGMGQK ddPTM_A549_MK2206_60min_R1 13 HQGVMVGMGQK 11 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;Q562R1;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTBL2;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;;;;;;;;;;;; 102.52 6.5525e-05 223479900.0 21899.700000000004 27759.9 27994.0 26303.499999999996 37607.4 28663.9 28861.700000000004 27708.6 41615.6 37899.100000000006 34771.7 False True 25595.833963740504 29172.760337880376 31963.970142623242 32747.858680808964 32075.40127822154 31697.094872443096 34105.49729810399 31636.3789040286 32189.73304645744 29337.666987931912 26136.927239900713 0.9792977471607996 1.1161511095055257 1.2229429209194471 1.2529345312947109 1.2272062811291427 1.2127322611991747 1.30487784524412 1.2104092655441305 1.2315806196727095 1.1224604452793112 1.0 14.673801921741303 -10.721084695449447 0.9396131961746139 0.9980797654595404 1.2014797363497112 0.21501620349698525 0.08812025206325923 0.4357126590481204 0.6733826866403001 0.06034670056619951 0.015060926813178877 1.9007075706767936e-11 10.721084695449447 0.2033999708901708 HQGVMVGMGQK ddPTM_A549_PD325901_60min_R1 18 HQGVMVGMGQK 11 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;Q562R1;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTBL2;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;;;;;;;;;;;;;;;;; 125.75 2.9497000000000003e-06 444113000.0 45449.2 50003.200000000004 51139.799999999996 50899.70000000001 66381.2 61753.5 56943.299999999996 60603.500000000015 62754.299999999996 57710.0 52988.200000000004 False True 50063.16932606731 54217.14515024566 54610.454356599395 54043.65886739408 61718.813514707894 61250.5999703077 59110.30844206937 59394.71564997398 60116.95500495669 54066.18075114982 46470.98731987499 1.077299455280908 1.1666880407995495 1.1751515839484492 1.1629548237353753 1.3281149610589749 1.3180395662502242 1.271983055474888 1.2781031580228916 1.2936448840897665 1.163439467704756 1.0 15.504042676138047 -10.812789310644975 1.0442790416165686 0.9991831086664267 1.2360204401766852 0.2332962073281012 0.0874721599829437 0.32871844904823344 0.6328061025305103 0.05726840007037639 0.014031232467818419 1.5389010265549047e-11 10.812789310644975 0.23683733151025854 HQGVMVGMGQKDS(ph)YVGDEAQSK ddPTM_A549_MK2206_60min_R1 2 HQGVMVGMGQKDSYVGDEAQSK 22 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 1 HQGVMVGMGQKDS(0.792)Y(0.208)VGDEAQS(0.001)K;HQGVMVGMGQKDS(0.524)Y(0.475)VGDEAQS(0.001)K 60.943000000000005 0.00044505 9170800.0 2025.5299999999997 2816.0 2635.91 2491.12 3400.2 2654.8 2226.5 2012.49 4008.2000000000003 3801.2 4404.8 True False 2367.3899445460593 2959.3223718915096 3009.7216738816187 3101.4445118306267 2900.035084217703 2935.729173886384 2631.0262297171876 2297.76662049214 3100.3490997801478 2942.5062799519474 3310.9665937044965 0.7150147479734278 0.8937940894717553 0.9090160195528195 0.9367187569115747 0.8758877512481876 0.8866683159740747 0.7946399201731138 0.6939866517714602 0.9363879133287485 0.888715182311672 1.0 11.693036739268944 -8.976819720009061 17.622443191960716 0.9719396091503886 0.8451332721394671 0.24147495276140685 0.07836231884909127 4.911677115683838 3734.4879789904458 0.013707197763192402 0.014163938701612503 1.054824673813203e-09 8.976819720009061 -0.12680633701092148 HQGVMVGMGQKDS(ph)YVGDEAQSK ddPTM_A549_PD325901_60min_R1 2 HQGVMVGMGQKDSYVGDEAQSK 22 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 1 HQGVMVGMGQKDS(0.712)Y(0.286)VGDEAQS(0.002)K;HQGVMVGMGQKDS(0.902)Y(0.098)VGDEAQSK 95.366 2.0410999999999997e-07 15670700.0 1565.3200000000002 2179.94 2574.0 2384.83 3088.5 2976.8 2244.69 3063.4 3558.3999999999996 2513.5 2525.0 True False 1724.2301340723207 2363.651194300095 2748.687118719408 2532.1355327580973 2871.574414746576 2952.5579277548936 2330.1129062914997 3002.2980838091894 3408.85282266933 2354.797181043406 2214.441007293781 0.7786299695467905 1.0673805201921638 1.241255517607361 1.1434648854577363 1.2967491142407372 1.3333197488801696 1.0522352587477952 1.3557814698700108 1.539373960038436 1.063382213970627 1.0 11.112726849002794 -4.805399647332707 1.0336498631453643 1.2579147675519422 0.0020776191503438417 0.4170967884563702 0.15222853138583842 3.603265273503274 1.5796592946205648 0.02959267912702563 6.257166147241556 1.565309974485047e-05 4.805399647332707 -1.2558371484015984 HQIGNT(ph)LIR ddPTM_A549_PD325901_60min_R1 2 HQIGNTLIR 9 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 HQIGNT(1)LIR;HQIGNT(1)LIR 101.39 0.00065481 9621300.0 978.45 1156.53 995.03 972.0 1081.32 975.89 1039.05 1230.69 1200.13 1151.71 1227.03 True False 1077.78152370318 1253.9948419423874 1062.5587194014654 1032.038232427834 1005.3718135514871 967.9426753952982 1078.591616339976 1206.1429224923727 1149.692709664497 1078.9908340479421 1076.1130887840354 1.0015504271219577 1.1653002412221853 0.987404326251727 0.9590425422610515 0.9342622295278621 0.8994804407490616 1.0023032222001327 1.1208328706932333 1.0683753609609967 1.0026742033842915 1.0 10.07161398342535 -8.021921282925184 24.67182647824238 1.0408664570223034 0.9912047320957529 0.1254832301009915 0.06967522458174372 1288.5511131927483 1450229.4601770455 0.012085555569906235 0.015676915451814124 9.507771090175312e-09 8.021921282925184 -0.04966172492655052 HQLLS(ph)PATK ddPTM_A549_MK2206_60min_R1 2 HQLLSPATK 9 0 B8ZZW4;P14778 B8ZZW4 IL1R1 Interleukin-1 receptor type 1;Interleukin-1 receptor type 1, membrane form;Interleukin-1 receptor type 1, soluble form 1 HQLLS(1)PATK;HQLLS(1)PATK 63.727 0.0020277 4845400.0 1334.8899999999999 1884.0299999999997 1377.72 1401.1599999999999 1859.98 1782.04 1466.79 1318.08 2396.4 2177.69 2109.67 True False 1560.1867970729077 1979.9190796572325 1573.1014126203793 1744.4442629004632 1586.379405900607 1970.6142899775843 1733.2867565627078 1504.9218764507066 1853.6192262644438 1685.7483165286096 1585.7807150700517 0.9838603674808762 1.2485453132590087 0.9920043784558747 1.1000539017296616 1.0003775369601016 1.242677673684872 1.0930179312252135 0.9490100756990394 1.1689000935936849 1.0630399906547874 1.0 10.6309775707396 -11.136271686756231 1.5033845878352312 1.000004243852214 1.0985117400683 0.019967241717559703 0.09916895916020425 0.6832678255595871 2.7663495929164403 0.06656635827866586 0.014285120551928605 7.30681839161579e-12 11.136271686756231 0.0985074962160859 HQLLS(ph)PATK ddPTM_A549_PD325901_60min_R1 2 HQLLSPATK 9 0 B8ZZW4;P14778 B8ZZW4 IL1R1 Interleukin-1 receptor type 1;Interleukin-1 receptor type 1, membrane form;Interleukin-1 receptor type 1, soluble form 1 HQLLS(0.999)PAT(0.001)K;HQLLS(0.999)PAT(0.001)K 54.7 0.0059072 3700600.0 1280.93 1166.9 1192.42 1441.51 1530.09 1436.94 1454.53 1705.25 1586.0900000000001 1619.96 1712.74 True False 1410.9690706291735 1265.2387582359054 1273.3447918039622 1530.5487987932584 1422.6217569239404 1425.2380370559392 1509.8829350993558 1671.2374510072536 1519.4321530765499 1517.6754491358972 1502.083837953407 0.9393410906754861 0.8423223299971034 0.8477188553861931 1.0189503143037841 0.9470987710394821 0.9488405380872945 1.0051921849825474 1.112612631052817 1.0115494985598008 1.0103799873139796 1.0 10.552749622963077 -6.559828655926957 1.0436189565995937 1.0116926049754122 0.8720323763671366 0.5287800036367046 0.05127711419137959 0.34075110257812097 0.6843037844031926 0.008077623969478137 0.031390287342402054 2.7553155554408326e-07 6.559828655926957 -0.13966022860827565 HQNS(ph)LPELEAAEAGAPGSGPVDLFR ddPTM_A549_MK2206_60min_R1 1 HQNSLPELEAAEAGAPGSGPVDLFR 25 0 Q96BZ8 Q96BZ8 LENG1 Leukocyte receptor cluster member 1 1 HQNS(1)LPELEAAEAGAPGSGPVDLFR 50.583 0.0025355 1822100.0 436.32 316.42 353.38 266.52 679.89 359.08 491.41 329.96 729.09 579.08 541.16 True False 509.96014900018076 332.5244264609064 403.4945977352361 331.81741196453737 579.8790816448369 397.07760726198705 580.6928360859298 376.73284046012 563.952279117486 448.2654258114735 406.7750367438079 1.2536662846431261 0.8174651746644289 0.991935495759938 0.8157270776021592 1.4255522813954096 0.9761602148463983 1.4275527838048172 0.9261454278901365 1.3863984467480248 1.1019983659759258 1.0 8.668087335364023 -6.745234546434084 24.999626177767723 1.1836781516518518 0.9604130987813241 0.20030803126080432 0.19936922540936797 298.2992038320549 460191.48521595885 0.028711768246513107 0.05962522370350909 1.7978996735744445e-07 6.745234546434084 -0.22326505287052767 HQNS(ph)LPELEAAEAGAPGSGPVDLFR ddPTM_A549_PD325901_60min_R1 2 HQNSLPELEAAEAGAPGSGPVDLFR 25 0 Q96BZ8 Q96BZ8 LENG1 Leukocyte receptor cluster member 1 1 HQNS(1)LPELEAAEAGAPGSGPVDLFR;HQNS(1)LPELEAAEAGAPGSGPVDLFR 100.69 3.2259e-12 10339300.0 1819.1 2121.3 2506.8999999999996 1931.77 2771.9 2224.62 2215.72 2324.8599999999997 2438.8 2564.2 2168.35 True False 2003.773692849358 2300.0693957029985 2677.033309214329 2051.0910455320122 2577.2113065358717 2206.503432290411 2300.040437088508 2278.4888434826107 2336.3057171554533 2402.2959743908896 1901.6566963031555 1.0536989650890822 1.2095082146921483 1.40773742937856 1.078581139024388 1.355245303500891 1.1603058725478061 1.209492986594171 1.1981599244027703 1.2285633477889364 1.263264804347169 1.0 10.893041106441723 -10.73392845646481 0.6744852070124421 0.9758211139131652 1.2185607718954004 0.0 0.1250200995817346 0.7248458000355366 0.4921460784979058 0.10293137128780071 0.018268835974997958 1.845319382973842e-11 10.73392845646481 0.24273965798223518 HQPGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 HQPGSPR 7 0 Q9Y548 Q9Y548 YIPF1 Protein YIPF1 1 HQPGS(1)PR;HQPGS(1)PR 69.628 0.021875 36290000.0 2711.37 2629.49 1750.39 1568.46 5418.6 4671.4 4723.8 4914.1 5387.2 3641.3 2750.6000000000004 True False 3168.9829693679417 2763.319809540131 1998.6216224171724 1952.7327704108457 4621.531117976016 5165.724447375641 5582.053314142398 5610.688723800083 4167.007801590642 2818.727801007319 2067.550107301941 1.5327236608080665 1.3365189069812378 0.9666617584544458 0.9444669628631508 2.2352692211203067 2.4984760606922736 2.6998394352951016 2.713689358233633 2.0154325580183388 1.3633177696890892 1.0 11.0137065783537 -6.7502625116377715 24.996469409597186 1.8006079576825191 1.1888781685869496 0.2952646641491401 0.559689526022908 354.9209280260009 793756.3818056165 0.10470184347912642 0.21637926440006303 1.7772048442717488e-07 6.7502625116377715 -0.6117297890955695 HQPGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 HQPGSPR 7 0 Q9Y548 Q9Y548 YIPF1 Protein YIPF1 1 HQPGS(1)PR 56.81 0.036699 10513000.0 1051.4 1359.2 1230.3 854.04 1031.4 1330.3 1077.4 1247.6 1263.2 1503.0 1344.6 True False 1158.1373540002292 1473.744554112815 1313.7955563949058 906.7921111344319 958.958022136836 1319.4664778595595 1118.4010465759027 1222.715639276734 1210.1120968963285 1408.1003234964148 1179.22272412167 0.9821192640795267 1.2497592897139225 1.114119944875953 0.7689744206802369 0.8132119594719518 1.1189289782745226 0.9484222307613097 1.0368826976154648 1.0261946892158698 1.1940919172374511 1.0 10.203620515820461 -6.033490394460156 24.96873834299813 0.9884707817327436 1.132439521140142 0.1613629976402684 0.12794083277154925 624.8482447507282 465855.0515372254 0.015276468528266347 0.04044683917816789 9.257838609863803e-07 6.033490394460156 0.1439687394073983 HQPS(ph)TPDPFLKPR ddPTM_A549_MK2206_60min_R1 1 HQPSTPDPFLKPR 13 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 HQPS(0.5)T(0.5)PDPFLKPR 58.07899999999999 0.0051534 15444000.0 609.24 904.83 765.05 621.76 1195.0 814.22 752.95 825.72 932.93 1270.9 1071.3 True False 712.064817512079 950.8819821585925 873.5455939706334 774.0912279118669 1019.2170830069281 900.3802199645064 889.7512686573348 942.7683386614451 721.6228445830782 983.8028073216161 805.2666436241433 0.8842596711908931 1.1808287226192555 1.0847904863402726 0.9612855990508065 1.26568893803907 1.1181143874435178 1.104915093282598 1.1707529997995054 0.8961290651943288 1.2217106161183602 1.0 9.653322763980604 -8.76492950566741 24.999960792725567 0.9509498340491452 1.1009176985707299 0.0 0.12938476647247799 76.37287291380922 547061.7243679381 0.01682217349388657 0.018261127952079143 1.7181872593041064e-09 8.76492950566741 0.14996786452158462 HQPST(ph)PDPFLKPR ddPTM_A549_MK2206_60min_R1 1 HQPSTPDPFLKPR 13 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 HQPS(0.132)T(0.868)PDPFLKPR 114.69 1.1016e-05 25730000.0 1737.1 1753.3 2089.4 2203.2 2938.4 2163.3 1902.5 1874.2 3257.7 2600.8 2050.0 True False 2030.2800119825215 1842.5354810502092 2385.7083380723384 2742.984098905406 2506.165252474944 2392.2189701176794 2248.159623641116 2139.873589496779 2519.8361514779176 2013.2774736659526 1540.928422878274 1.317569318495791 1.1957307384911289 1.548227875254656 1.780085342174319 1.6263995233430248 1.5524530111848378 1.4589643427056898 1.3886911018876176 1.6352713818927154 1.30653536126317 1.0 10.589584133953554 -10.84899325099482 0.9588082919189643 0.9822599479935445 1.510812811084062 0.318062603553955 0.17638941304278358 0.3629913722800986 0.5587553784594239 0.13858156285766932 0.02955331370694137 1.4158157817880935e-11 10.84899325099482 0.5285528630905174 HQPST(ph)PDPFLKPR ddPTM_A549_PD325901_60min_R1 2 HQPSTPDPFLKPR 13 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 HQPS(0.137)T(0.863)PDPFLKPR;HQPS(0.343)T(0.657)PDPFLKPR 69.431 0.0018652 21512000.0 1910.21 2144.16 2345.0 2516.1000000000004 3079.3 3133.2 2267.73 3056.5 3026.3 2765.7 2600.3 True False 2104.133112977721 2324.8558881301738 2504.1458016305423 2671.513782522299 2863.0205910083005 3107.684258009148 2354.0297060994703 2995.5357097221354 2899.1151352417382 2591.0732300026852 2280.4795846598086 0.9226713219147743 1.0194591978673577 1.0980785877125487 1.1714701593879093 1.2554467096601494 1.3627327685429544 1.0322520411646805 1.3135551529916438 1.2712743208680006 1.1361966348798556 1.0 11.1551215396015 -5.664960202283593 1.765360929150894 1.1648203594586106 0.919728921447934 0.38110600453051313 0.10762032603404036 0.5013885707417872 2.559241410928428 0.018919016077827543 0.15794605395845715 2.1629167192046633e-06 5.664960202283593 -0.24509143801067668 HQPWQS(ph)PERPLSR ddPTM_A549_MK2206_60min_R1 4 HQPWQSPERPLSR 13 1 J3QRS2;V9GYU5;J3QL08;V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52 J3QRS2 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 HQPWQS(0.994)PERPLS(0.006)R;HQPWQS(0.997)PERPLS(0.003)R;HQPWQS(0.999)PERPLS(0.001)R;HQPWQS(0.98)PERPLS(0.02)R 74.12 0.00032662 232863000.0 5663.43 5613.429999999999 5301.08 3973.51 8309.9 7290.52 6962.4 7224.6 9422.6 7952.3 7286.79 True False 6619.278526430358 5899.129610101908 6052.852855742562 4947.020128377645 7087.524718057962 8061.997987344492 8227.377957234648 8248.709174409574 7288.396144800261 6155.869906887785 5477.278937826911 1.208497613790787 1.0770182926711351 1.10508391565393 0.9031893727764677 1.293986448108467 1.4718983785300987 1.5020921977179473 1.5059866893838014 1.330660028005056 1.1238919866531578 1.0 12.419243638092711 -4.181771992577769 11.294028049992752 1.206094078495521 1.1751904479648656 0.0 0.19984010364772287 0.0 0.0 0.030245896322633574 0.0 6.580032026408077e-05 4.181771992577769 -0.030903630530655368 HQPWQS(ph)PERPLSR ddPTM_A549_PD325901_60min_R1 2 HQPWQSPERPLSR 13 1 J3QRS2;V9GYU5;J3QL08;V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52 J3QRS2 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 HQPWQS(0.999)PERPLS(0.001)R;HQPWQS(1)PERPLSR 88.385 5.3303e-05 199566000.0 11815.1 11508.0 11920.9 12377.6 12952.0 11900.400000000001 11388.4 11263.1 16051.0 15006.800000000001 13776.7 True False 13014.560254183092 12477.819547329513 12729.923960195101 13142.136240430831 12042.296201974319 11803.48708796504 11821.791793971594 11038.44863476898 15376.432288856056 14059.268086923497 12082.25323769673 1.0771633401605551 1.0327394486649735 1.053605127268615 1.087722296651361 0.9966929152256349 0.9769276355786074 0.9784426432221687 0.9136084484911249 1.2726460856557336 1.1636296484051887 1.0 13.560601909685532 -8.747996713615255 24.999934288011893 1.1287495559170468 1.0158945407218705 0.3672335045118694 0.07560092225417984 283.69794688672306 527605.4662389681 0.017950110236514164 0.020297683406549076 1.786501093577184e-09 8.747996713615255 -0.11285501519517638 HQPWQS(ph)PERPLSRLS(ph)PER ddPTM_A549_PD325901_60min_R1 2 HQPWQSPERPLSRLSPER 18 2 J3QRS2;V9GYU5;J3QL08;V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52 J3QRS2 ELAC2 Zinc phosphodiesterase ELAC protein 2 2 HQPWQS(0.999)PERPLS(0.454)RLS(0.547)PER;HQPWQS(0.998)PERPLS(0.249)RLS(0.753)PER 51.81100000000001 0.0049176 29565000.0 2684.3 2766.4 3287.6000000000004 3327.0 2885.3999999999996 3115.3999999999996 2717.6000000000004 2716.8 3910.8 3257.5 3693.2 True False 2956.808159922784 2999.5342366816453 3510.7163059448044 3532.5012338347765 2682.7394580896134 3090.029215307576 2821.0197551277806 2662.6112927116314 3746.442676173343 3051.820894071571 3238.9598131237185 0.9128881895793508 0.9260794853113147 1.0839023972202355 1.0906282997157537 0.828271918416402 0.954019004122033 0.870964728768009 0.8220575265933155 1.1566808149311978 0.942222525178024 1.0 11.66131485289806 -8.77103942179562 24.999957802596697 1.0739881565070246 0.9406766775969485 0.1264446974021156 0.09788771222071986 197.43455016424932 514147.7527908286 0.017619367486171617 0.018873890447957304 1.694184008930627e-09 8.77103942179562 -0.1333114789100761 HQQIPLHS(ph)PPSK ddPTM_A549_MK2206_60min_R1 2 HQQIPLHSPPSK 12 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;C9JAU4 E7EX82 PHC3 Polyhomeotic-like protein 3 1 HQQIPLHS(0.999)PPS(0.001)K;HQQIPLHS(1)PPSK 81.619 0.000221 7233800.0 2902.8 2958.7 2972.1 2468.3999999999996 3971.7000000000003 3192.9 2912.5 2970.2 4329.6 4329.799999999999 4240.6 True False 3392.721673353788 3109.285192370531 3393.588471132763 3073.1581108106875 3387.4681912791743 3530.770558724512 3441.6635499893578 3391.234945856007 3348.9525129504823 3351.695172823301 3187.5419853939547 1.064369250318902 0.9754491726283092 1.064641183295141 0.9641153355446296 1.0627211207887857 1.107678134093075 1.0797233623148639 1.0639028321494808 1.050637929883323 1.0514983608628636 1.0 11.63822862952636 -4.880181381826473 20.09348498541848 1.0340723696632672 8.813404722858577 0.0 0.042870372306191236 1947.599550352969 328994.6590970758 0.0059836239337805 5094.867331355847 1.3177062874211291e-05 4.880181381826473 7.77933235319531 HQQIPLHS(ph)PPSK ddPTM_A549_PD325901_60min_R1 4 HQQIPLHSPPSK 12 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;C9JAU4 E7EX82 PHC3 Polyhomeotic-like protein 3 1 HQQIPLHS(0.999)PPS(0.001)K;HQQIPLHS(0.999)PPS(0.001)K;HQQIPLHS(0.999)PPS(0.001)K;HQQIPLHS(0.995)PPS(0.005)K 106.52 0.00017467 49505300.0 8019.4 8227.6 8375.400000000001 9590.2 11198.7 9297.900000000001 9215.8 10573.900000000001 10209.6 10367.0 10496.3 True False 8833.523584429739 8920.968726764708 8943.805009371612 10182.564873075535 10412.141945417676 9222.18098510892 9566.512312079263 10362.995269435925 9780.52601684038 9712.425850756706 9205.321641527808 0.9596105305630188 0.9691099425053978 0.9715907121619282 1.1061606828749042 1.1311002864305753 1.001831477946958 1.0392371591799707 1.1257613446862655 1.0624860703093375 1.0550881575871514 1.0 13.168252416072164 -6.140752099714482 8.359490173711439 1.0470247955048382 0.9659648677943017 0.4634588263121291 0.044148902624998716 0.2650088805501224 17.11594276197464 0.007015483749091275 0.018649539726979403 7.231824866902736e-07 6.140752099714482 -0.0810599277105365 HQQQLLAS(ph)PGSSTVDNK ddPTM_A549_MK2206_60min_R1 2 HQQQLLASPGSSTVDNK 17 0 F2Z2X4;Q9C0E2 F2Z2X4 XPO4 Exportin-4 1 HQQQLLAS(1)PGSSTVDNK;HQQQLLAS(1)PGSSTVDNK 156.15 1.2762e-22 58741000.0 7281.8 8285.7 7687.799999999999 7138.0 11374.4 8426.8 7030.4 7801.200000000001 12156.599999999999 11506.1 11724.8 True False 8510.78981708268 8707.406738913887 8778.045640582226 8886.810320437 9701.240827576563 9318.51838274287 8307.732677028389 8907.043990173019 9403.149510101122 8906.864018666492 8813.20857198204 0.9656857372171156 0.9879950834926899 0.99601020092596 1.0083512999668414 1.1007615158930488 1.0573355102893234 0.9426456447926804 1.0106471346303194 1.0669382703587154 1.0106267139736362 1.0 13.105451632770327 -6.234500269126419 2.6986779044532665 1.03023704123138 0.980260060049694 0.18618135484806098 0.03930331392867087 0.36457949029921105 5.223807749947401 0.006143349315587339 0.01813703576319734 5.827734136594514e-07 6.234500269126419 -0.04997698118168592 HQQQLLAS(ph)PGSSTVDNK ddPTM_A549_PD325901_60min_R1 2 HQQQLLASPGSSTVDNK 17 0 F2Z2X4;Q9C0E2 F2Z2X4 XPO4 Exportin-4 1 HQQQLLAS(1)PGSSTVDNK;HQQQLLAS(0.996)PGS(0.004)STVDNK 178.85 4.9716999999999995e-31 76111000.0 6896.5 8442.0 8397.3 8886.5 10673.7 9977.099999999999 9493.5 10123.099999999999 9235.6 9476.4 10102.0 True False 7596.6276030650315 9153.436967201582 8967.191275067016 9435.398922294184 9924.016134265996 9895.849805496966 9854.780337542532 9921.186829081678 8847.459849664137 8878.058486747463 8859.518041854168 0.857453821661293 1.0331754982560994 1.0121533962348943 1.0650013779213992 1.120153047534067 1.1169738307148263 1.1123381984196592 1.1198336954913315 0.9986389561900473 1.0020927148413385 1.0 13.113012502907477 -5.260945417713971 6.849991656142688 1.0354167038350468 0.8545460555304691 0.4957060053315725 0.053943686788297196 0.09301323911540377 30.597858369852233 0.009018108938713645 0.07709886624495042 5.4834587689652114e-06 5.260945417713971 -0.18087064830457766 HQS(ph)DPS(ph)EDEDER ddPTM_A549_MK2206_60min_R1 1 HQSDPSEDEDER 12 0 E5RHX2;Q96BR1-2;Q96BR1;E5RJV7;E5RHR8;E5RHY6 E5RHX2 SGK3 Serine/threonine-protein kinase Sgk3 2 HQS(1)DPS(1)EDEDER 50.675 0.032906 1481700.0 136.27 0.0 140.82 0.0 238.76 0.0 109.13 175.12 176.93 174.24 0.0 True False 159.2690445183687 0.0 160.79039349447046 0.0 203.63872028345952 0.0 128.95750839839948 199.94379628250766 136.8556374991521 134.87906298506448 0.0 0.0 HQS(ph)DPS(ph)EDEDER ddPTM_A549_PD325901_60min_R1 3 HQSDPSEDEDER 12 0 E5RHX2;Q96BR1-2;Q96BR1;E5RJV7;E5RHR8;E5RHY6 E5RHX2 SGK3 Serine/threonine-protein kinase Sgk3 2 HQS(1)DPS(1)EDEDER;HQS(1)DPS(1)EDEDER;HQS(1)DPS(1)EDEDER 60.628 0.009913 12711600.0 390.12 547.1 637.28 504.95000000000005 870.6200000000001 606.0 805.82 615.0999999999999 666.65 584.27 508.72 True False 429.72469520883516 593.2060370476172 680.529653075954 536.1396146753443 809.4706546759484 601.0649369186599 836.4859210616241 602.831347963385 638.6330188378225 547.379092487858 446.15066504177923 0.9631829085553287 1.329609218428638 1.525335960246135 1.2017008080109848 1.814343714135552 1.3472241195972976 1.8748956050156116 1.3511833449960982 1.4314290415279747 1.2268929206607802 1.0 8.801387180195249 -10.483477271965269 0.8030651133233853 0.9992603572412556 1.440053088871467 0.16867390501416113 0.25105262327654404 0.6066307801714412 0.702609551325884 0.1577230412055255 0.04513036074510158 3.2849043482002704e-11 10.483477271965269 0.4407927316302115 HQS(ph)FGAAVLSR ddPTM_A549_MK2206_60min_R1 2 HQSFGAAVLSR 11 0 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 HQS(1)FGAAVLSR;HQS(1)FGAAVLSR 155.81 1.1148e-13 42496000.0 2464.9 2849.7 2815.8 4894.299999999999 4515.8 3596.6000000000004 2797.4 3259.8999999999996 5401.7 4582.799999999999 4275.8 True False 2880.9148589809 2994.7375579471745 3215.1227808672775 6093.403719713473 3851.5318020440886 3977.1898247701415 3305.651369867892 3722.0008080250473 4178.223574742383 3547.54229710717 3214.0008539233777 0.8963640614669176 0.9317787063719833 1.000349074874243 1.8958936218934623 1.1983605409881792 1.237457612967068 1.0285160210311193 1.1580584378132777 1.3000069896191735 1.1037776461000728 1.0 11.650154596982766 -11.013705374020386 1.290172616966244 0.9997048312806901 1.2001176367014594 0.0286971891645027 0.2593479411425209 1.0762188036369202 3.1822568831616715 0.18861524152785503 0.04245941750456644 9.689349601684531e-12 11.013705374020386 0.20041280542076934 HQS(ph)FGAAVLSR ddPTM_A549_PD325901_60min_R1 3 HQSFGAAVLSR 11 0 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR 113.65 7.5261e-06 87383900.0 4936.34 4822.06 4391.87 5833.7 6415.18 5417.66 4878.42 6240.469999999999 5908.54 5358.59 5569.469999999999 True False 5437.47360285856 5228.431919221044 4689.928708659756 6194.0343997060245 5964.599887969547 5373.540373179447 5064.070942673858 6115.998930295994 5660.224611301327 5020.247712897308 4884.460497779206 1.1132188714251636 1.0704215791279774 0.9601733314850439 1.2681102452404387 1.2211379108668077 1.1001297636909149 1.0367718082634334 1.2521339732559462 1.1588228861457337 1.0277998389340726 1.0 12.253983505983351 -10.761386574206043 1.0496057056487125 1.0011585053098642 1.1317541741929897 0.20522982847530125 0.08844915717869992 0.627694699035361 1.245330509136088 0.05902910504651276 0.015583068294008002 1.73226139078694e-11 10.761386574206043 0.13059566888312557 HQYQQR ddPTM_A549_MK2206_60min_R1 1 HQYQQR 6 0 A0A087WZK9;B3KS98;O15372 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 0 92.279 0.039535 4254600.0 455.2 326.44 343.7 273.4 451.08 431.22 580.99 449.69 616.78 363.89 521.93 False True 532.0266314284983 343.0544016620258 392.441828178167 340.3830122733923 384.7267295420629 476.8514141793302 686.548362543628 513.4349346178669 477.0803147952695 281.68699626741903 392.3203764648086 1.3561024696769004 0.8744241243681565 1.000309572789598 0.867614920592647 0.980644270911514 1.2154643061781016 1.7499686575805777 1.3087134021546862 1.21604775947207 0.7180024621858675 1.0 8.615888458305463 -7.258550172807661 23.772621667088117 1.1827079339089284 0.998868587787454 0.10755416018021025 0.2610893619770929 231.0560378612101 1901134.7282403968 0.036527184292236704 0.061483286797250444 5.513784995105297e-08 7.258550172807661 -0.18383934612147435 HRAEAPPLEREDS(ph)GTFSLGK ddPTM_A549_MK2206_60min_R1 2 HRAEAPPLEREDSGTFSLGK 20 2 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 HRAEAPPLEREDS(0.997)GT(0.003)FSLGK;HRAEAPPLEREDS(0.964)GT(0.036)FSLGK 202.2 1.0685e-55 69261000.0 2499.91 3392.2 3538.6 2678.6000000000004 5204.6 3514.2999999999997 3441.2 3281.7 5255.1 5340.4 5043.8 True False 2921.833691068577 3564.848490742323 4040.4266895294227 3334.8571202469257 4439.010234491929 3886.180893396458 4066.4214963857103 3746.891024784749 4064.828240670289 4133.999930931117 3791.2852582016767 0.7706710236977771 0.9402744051058929 1.065714240517455 0.8796112381764571 1.1708457507619692 1.025029938063746 1.072570703454411 0.988290452869277 1.072150461872226 1.090395380296971 1.0 11.888471294351938 -4.828356220000914 1.1556171770160493 1.0363491145268136 0.3403348051102138 0.5637912934176451 0.0698532627699833 1.9027946287087951 1.0488471499527872 0.009167991643105625 2.037299872435945 1.484717337666524e-05 4.828356220000914 -0.6960143094165998 HRAEAPPLEREDS(ph)GTFSLGK ddPTM_A549_PD325901_60min_R1 2 HRAEAPPLEREDSGTFSLGK 20 2 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 HRAEAPPLEREDS(0.999)GT(0.001)FSLGK;HRAEAPPLEREDS(0.992)GT(0.008)FSLGK 191.65 6.1223e-45 129298000.0 4268.9 4859.6 5215.3 5831.4 5363.5 6861.1 5597.5 6198.299999999999 6676.700000000001 5679.9 4872.6 True False 4702.275585401915 5269.135546767682 5569.241620146594 6191.592333929705 4986.7862630705085 6805.225476390459 5810.51592556953 6074.670044027712 6396.101517849684 5321.270144662204 4273.30108995631 1.1003848047248155 1.23303634259517 1.3032645027602148 1.4489014940889662 1.1669634687785349 1.592498476736175 1.3597253746585258 1.4215403773689674 1.496758918505103 1.2452364185544924 1.0 12.061135255246189 -10.9195994012927 1.1779783901524055 1.000274632364146 1.3620571104148465 0.1819187080168383 0.15412242703896908 0.33677285979899435 0.831206276649114 0.09831769603455014 0.023326014801611436 1.2033739301221595e-11 10.9195994012927 0.3617824780507004 HRAS(ph)FLGGR ddPTM_A549_PD325901_60min_R1 1 HRASFLGGR 9 1 Q6UXT9 Q6UXT9 ABHD15 Abhydrolase domain-containing protein 15 1 HRAS(1)FLGGR 71.555 0.00085052 12929000.0 1217.7 1296.1 1760.8 1548.4 1727.3 1391.5 1730.8 1930.1 2202.9 1494.5 1403.3 True False 1341.3200075766388 1405.3268956633449 1880.298476550557 1644.0411513284564 1605.9804068615065 1380.168085350354 1796.666541130102 1891.6026413658406 2110.3197737911055 1400.137014947034 1230.7029962516287 1.0898811587051611 1.1418895541357832 1.527824732918837 1.3358553252374765 1.3049293060574858 1.1214469206250033 1.4598701283756008 1.5370098611339407 1.7147270951793725 1.1376725491133548 1.0 10.265266925011126 -7.783130910409234 24.937169163331674 1.3725621995599513 1.267089905933235 0.06817373532652038 0.2106594508187448 808.8115291585541 929828.8222305072 0.04496831000799656 0.06216163381528807 1.6476656569211106e-08 7.783130910409234 -0.10547229362671628 HRAS(ph)REKEER ddPTM_A549_MK2206_60min_R1 1 HRASREKEER 10 3 H0Y8P7;Q6UN15;Q6UN15-5;Q6UN15-3 H0Y8P7;Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 HRAS(1)REKEER 72.089 0.00040303 45771000.0 1435.3 1882.8 1941.3 1218.9 918.22 715.98 873.53 815.17 872.13 2736.8 1733.5 True False 1677.543550284102 1978.6264779109854 2216.605531109327 1517.5305547184996 783.1510543586791 791.7445283709408 1032.239093844533 930.722843853425 674.593947505429 2118.5549792098514 1303.0241078338959 1.2874232642347614 1.5184880049534837 1.7011239606258233 1.1646220093664976 0.6010257597310026 0.6076207827705588 0.7921872570419999 0.7142790668705492 0.5177140955794376 1.6258755048912081 1.0 10.347648060763579 -6.55325159285659 4.206280119044872 0.7430795009382254 1.4993829329745774 0.4606828177500959 0.3057608129222229 0.07783416573049978 3.114395038954032 0.028729524305644173 0.06373030558766588 2.7973603002639856e-07 6.55325159285659 0.756303432036352 HRAS(ph)REKEER ddPTM_A549_PD325901_60min_R1 2 HRASREKEER 10 3 H0Y8P7;Q6UN15;Q6UN15-5;Q6UN15-3 H0Y8P7;Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 HRAS(1)REKEER;HRAS(1)REKEER 83.617 0.00016831 212142000.0 4545.7 5749.5 6873.4 6559.6 7397.299999999999 8136.6 7750.7 9134.6 7023.0 6490.1 6337.799999999999 True False 5007.176117632528 6234.030542872003 7339.870257111878 6964.771594067515 6877.739167299608 8070.338227281136 8045.65712984578 8952.403237044933 6727.847733140371 6080.313978392604 5558.290778624365 0.9008481774448954 1.12157330214647 1.3205264980628524 1.2530419640606214 1.2373838363673728 1.4519460295811446 1.4475056182355792 1.6106396001219254 1.2104166552447735 1.0939179363871705 1.0 12.440425594894355 -9.818928335353268 1.2190974470001998 1.0387729686215956 1.2928465712266082 0.20281308655982266 0.17874777647922738 0.4254192167942196 1.2805394515258817 0.054887230629753314 0.03567451703055447 1.5173007225841375e-10 9.818928335353268 0.25407360260501255 HRDGGEALVS(ph)PDGTVTEAPR ddPTM_A549_PD325901_60min_R1 1 HRDGGEALVSPDGTVTEAPR 20 1 Q96HN2-2;Q96HN2 Q96HN2-2 AHCYL2 Putative adenosylhomocysteinase 3 1 HRDGGEALVS(0.996)PDGT(0.003)VT(0.001)EAPR 53.865 0.0011194 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 HREDS(ph)DVEMVEDDSR ddPTM_A549_MK2206_60min_R1 5 HREDSDVEMVEDDSR 15 1 H0Y4N0;H0Y806;E7EUC9;A0A087WX20;A0A669KB03;A0A669KBB4;A0A669KBK2;H0Y818;A0A669KAW3;P40692-2;P40692-3;P40692 H0Y4N0 MLH1 DNA mismatch repair protein Mlh1 1 HREDS(1)DVEMVEDDSR;HREDS(1)DVEMVEDDSR;HREDS(0.999)DVEMVEDDS(0.001)R;HREDS(1)DVEMVEDDSR;HREDS(1)DVEMVEDDSR 113.49 2.877e-07 63782000.0 954.1260000000001 1372.8500000000001 1245.49 1385.67 1884.8799999999999 1519.0240000000001 1795.02 1809.56 2626.8 2282.28 1320.24 True False 1115.1591426589348 1442.7222010835444 1422.1192102927703 1725.1592122050902 1607.6166488854371 1679.7661114334762 2121.151898884772 2066.070671545079 2031.8339941376412 1766.7113628877005 992.3879712296642 1.1237128774113871 1.4537884808255714 1.4330274565204852 1.738391901372456 1.6199477376710294 1.692650616625355 2.1374220167707803 2.0819182934926337 2.0474190065202054 1.7802627743447708 1.0 9.954760438152505 -5.2409278728989745 1.2282175808461815 1.6261086465491221 0.8931359175351694 0.21006868920244148 0.31644921577407387 3.0020458878646266 3.6100027135761428 0.06585176164101299 2.8172878753603148 5.742118186914503e-06 5.2409278728989745 -0.7329727290139527 HREDS(ph)DVEMVEDDSR ddPTM_A549_PD325901_60min_R1 4 HREDSDVEMVEDDSR 15 1 H0Y4N0;H0Y806;E7EUC9;A0A087WX20;A0A669KB03;A0A669KBB4;A0A669KBK2;H0Y818;A0A669KAW3;P40692-2;P40692-3;P40692 H0Y4N0 MLH1 DNA mismatch repair protein Mlh1 1 HREDS(1)DVEMVEDDSR;HREDS(1)DVEMVEDDSR;HREDS(1)DVEMVEDDSR;HREDS(1)DVEMVEDDSR 104.38 1.2876e-06 61168000.0 1381.98 1623.84 1666.1000000000001 1689.9100000000003 2499.38 1768.8000000000002 1969.82 1714.1100000000001 2264.76 2181.75 1445.3500000000001 True False 1522.2775922400951 1760.6866956669755 1779.1715650731956 1794.2919026359266 2323.8321711929098 1754.39547924377 2044.7825780268633 1679.9207313567179 2169.58001311505 2043.9939326602164 1267.581112828541 1.2009311095234072 1.3890130405446757 1.4035958307260252 1.4155243277742264 1.833280843075517 1.3840498738017073 1.6131374610529166 1.3252964361452675 1.7115906754667127 1.612515295450522 1.0 10.307862353256624 -10.96644675222357 1.2105791836307223 0.9977774451752675 1.4988084247434832 0.0 0.24817531479576044 0.304582732293234 0.7879059503229654 0.1273173468118671 0.02892014034270238 1.0803220683893472e-11 10.96644675222357 0.5010309795682157 HREDS(ph)DVEMVEDDSRK ddPTM_A549_MK2206_60min_R1 5 HREDSDVEMVEDDSRK 16 2 H0Y4N0;H0Y806;E7EUC9;A0A087WX20;A0A669KB03;A0A669KBB4;A0A669KBK2;H0Y818;A0A669KAW3;P40692-2;P40692-3;P40692 H0Y4N0 MLH1 DNA mismatch repair protein Mlh1 1 HREDS(0.998)DVEMVEDDS(0.002)RK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK 126.69 1.4379e-09 248122000.0 3776.69 4881.71 4771.83 4023.76 8097.32 5456.339999999999 5849.900000000001 6480.33 8469.55 8014.23 6149.32 True False 4414.102940794584 5130.16818753072 5448.547247469953 5009.58138063345 6906.214954454944 6033.726277174643 6912.751107667892 7398.936622678294 6551.210448092147 6203.809876875531 4622.274131401866 0.9549634693466036 1.1098796916172555 1.1787590031613921 1.0837914927200822 1.4941162635804972 1.30535881378907 1.495530319308725 1.600713504292812 1.4173132665554962 1.342155333178824 1.0 12.17438710835475 -5.674596464080057 1.1403177608984276 1.2753141167156266 0.9343395126757548 0.29866510468420293 0.1748283061143021 1.318267521663022 2.1641366305136724 0.03396625788178944 0.44783864535241497 2.1154537553344996e-06 5.674596464080057 -0.3409746040398718 HREDS(ph)DVEMVEDDSRK ddPTM_A549_PD325901_60min_R1 5 HREDSDVEMVEDDSRK 16 2 H0Y4N0;H0Y806;E7EUC9;A0A087WX20;A0A669KB03;A0A669KBB4;A0A669KBK2;H0Y818;A0A669KAW3;P40692-2;P40692-3;P40692 H0Y4N0 MLH1 DNA mismatch repair protein Mlh1 1 HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK 126.9 1.4729999999999998e-09 290079000.0 6232.1 7613.54 8755.58 8546.57 9658.24 9106.82 8161.16 7758.38 11449.62 8641.32 7587.98 True False 6864.778204170463 8255.159735520952 9349.786310379675 9074.472218231229 8979.878541519178 9032.657077276552 8471.73740975811 7603.633024568628 10968.432288526088 8095.7055804631045 6654.706564168338 1.0315673783624415 1.240499435387596 1.404988517558798 1.363617182926126 1.34940263029335 1.3573336390085284 1.2730444728206964 1.142594786299023 1.6482217784905218 1.216538325529437 1.0 12.700159337312783 -11.174103290622845 1.5891038413491374 1.0004971591613903 1.3609908135820445 0.09071995788466092 0.1660068704099359 0.3481522729570945 1.582433668934411 0.12950224581937536 0.02751155479523638 6.69725306054807e-12 11.174103290622845 0.3604936544206543 HREEIGNR ddPTM_A549_MK2206_60min_R1 2 HREEIGNR 8 1 H0Y8R1;F5H5I6;H0YAK1;Q12849-5;Q12849 H0Y8R1 GRSF1 G-rich sequence factor 1 0 ; 69.825 0.006959300000000001 14695800.0 815.2 811.23 1122.54 1175.0900000000001 1584.77 1244.62 1563.74 1134.41 1801.24 1701.92 1216.47 False True 952.7858302735323 852.518141956517 1281.733051507476 1462.987102751794 1351.6524323321253 1376.324862288109 1847.8513166215828 1295.2160914849223 1393.2620159892194 1317.455089965226 914.3869261359677 1.0419941526283971 0.9323385074621562 1.4017403517828564 1.5999650267683843 1.478206209754072 1.5051886930450842 2.020863667014866 1.4164857944308864 1.523711654405308 1.4408070066493086 1.0 9.836660965884372 -3.4702921993539237 14.585184202079173 1.3378227240913818 1.2676999945382392 0.0 0.3021848309090979 0.0 0.0 0.0451660922105768 0.0 0.00033861625376550885 3.4702921993539237 -0.07012272955314258 HRGS(ph)EEDPLLSPVETWK ddPTM_A549_MK2206_60min_R1 4 HRGSEEDPLLSPVETWK 17 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HRGS(1)EEDPLLSPVETWK;HRGS(0.989)EEDPLLS(0.011)PVETWK;HRGS(1)EEDPLLSPVETWK;HRGS(0.998)EEDPLLS(0.002)PVETWK 118.32 3.2619000000000004e-10 27828000.0 2736.59 3258.58 2409.379 2529.5110000000004 4876.55 3571.47 3258.52 3832.06 6214.35 4741.86 3987.7200000000003 True False 3198.4594887981425 3424.4278034794897 2751.0651717605006 3149.2413085540625 4159.215954926722 3949.400584850085 3850.550905033931 4375.266240191563 4806.8096472777725 3670.6705326352007 2997.4590685269004 1.0670569357832878 1.1424435580908274 0.9177990787752475 1.050636968364594 1.3875805673539243 1.3175828241721466 1.2846049994358328 1.45965837736753 1.6036281188120032 1.2245940473973342 1.0 11.549524337872414 -6.7499209228159645 23.83949741128696 1.3129890846149883 1.0424321359762914 0.44977601112545273 0.149045093179275 141.6722782308216 293211.9829255602 0.031984710723171224 0.06608197830914077 1.778603232093114e-07 6.7499209228159645 -0.27055694863869695 HRGS(ph)EEDPLLSPVETWK ddPTM_A549_PD325901_60min_R1 4 HRGSEEDPLLSPVETWK 17 1 Q13017-2;Q13017;A0A0A0MSK6;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 HRGS(1)EEDPLLSPVETWK;HRGS(0.999)EEDPLLS(0.001)PVETWK;HRGS(1)EEDPLLSPVETWK;HRGS(1)EEDPLLSPVETWK 125.04 7.819400000000001e-11 21812500.0 3906.9300000000003 4001.12 4327.47 4165.34 4391.96 4843.81 4007.0699999999997 5233.71 7433.570000000001 6793.96 7758.76 True False 4303.5586574701465 4338.308424331861 4621.158137391094 4422.623591626498 4083.4838810394613 4804.363617320086 4159.561241602839 5129.319548283932 7121.162903836005 6364.988206135531 6804.481706831957 0.6324594352497429 0.6375663292585584 0.679134478787896 0.6499574518932156 0.6001168137375531 0.7060587160512641 0.6112972921106514 0.7538148780874672 1.0465400908765892 0.9354111716906877 1.0 12.732269561386222 -8.644802640267539 3.6818597055656435 1.0223808502753422 0.6485289827573286 0.9321038827577864 0.04081944782331377 0.026921199408879694 0.7004323118681126 0.005575314139640887 0.006303472963551816 2.265673680942309e-09 8.644802640267539 -0.3738518675180136 HRHS(ph)PTGPPGFPR ddPTM_A549_MK2206_60min_R1 5 HRHSPTGPPGFPR 13 1 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 HRHS(0.984)PT(0.016)GPPGFPR;HRHS(0.814)PT(0.186)GPPGFPR;HRHS(0.981)PT(0.019)GPPGFPR;HRHS(0.996)PT(0.004)GPPGFPR;HRHS(0.815)PT(0.185)GPPGFPR 160.47 6.0111000000000005e-19 307046500.0 8007.150000000001 7725.4400000000005 7095.370000000001 4316.91 11128.81 11093.29 10215.47 8739.59 14674.599999999999 12247.0 11761.099999999999 True False 9358.561163977816 8118.631897977828 8101.600158279083 5374.553143793457 9491.776791245462 12267.174584670063 12071.488667814512 9978.453646371867 11350.82653052086 9480.394194089093 8840.494280153009 1.0586015744603638 0.9183459250920202 0.9164193654270271 0.607947132080542 1.0736703729965176 1.3876118456645556 1.3654766673980114 1.1287212377676197 1.2839583592066306 1.0723828208760526 1.0 13.109911318938327 -6.988242717385382 24.909099856789258 1.1742432037154855 0.8762702408622929 0.5111826090043476 0.14941298248509538 167.48498882749712 354832.8422926525 0.024453348736621246 0.04618797889428245 1.0274419235337421e-07 6.988242717385382 -0.29797296285319264 HRHS(ph)PTGPPGFPR ddPTM_A549_PD325901_60min_R1 8 HRHSPTGPPGFPR 13 1 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 HRHS(0.975)PT(0.025)GPPGFPR;HRHS(0.98)PT(0.02)GPPGFPR;HRHS(0.805)PT(0.195)GPPGFPR;HRHS(0.997)PT(0.003)GPPGFPR;HRHS(0.876)PT(0.124)GPPGFPR;HRHS(0.999)PT(0.001)GPPGFPR;HRHS(0.838)PT(0.162)GPPGFPR;HRHS(0.941)PT(0.059)GPPGFPR 151.9 1.8829e-13 277035600.0 12593.779999999999 12690.890000000001 14752.16 13736.029999999999 14477.720000000001 14471.71 11061.019999999999 8429.03 16510.66 16286.41 15498.78 True False 13872.291274549167 13760.395838982331 15753.330289544563 14584.473376312446 13460.854892622574 14353.857191840152 11481.953168922382 8260.906384203885 15816.774377566762 15258.083293143874 13592.528314861269 1.0205821134381616 1.012349985244285 1.1589698343553054 1.0729772297304427 0.9903128086851413 1.0560108361993619 0.8447253449064874 0.607753479915278 1.163637405137765 1.1225345969271652 1.0 13.730526212994818 -4.250221241180272 15.164027191008207 1.0291120250908141 1.0127718866442856 0.0 0.1539136988535042 0.0 0.0 0.021076563663886348 0.0 5.620549264922288e-05 4.250221241180272 -0.016340138446528485 HRPELIDYGK ddPTM_A549_MK2206_60min_R1 2 HRPELIDYGK 10 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;G3V2W4;G3V2X9 P12814-4 ACTN1 Alpha-actinin-1 0 ; 71.016 0.010095999999999999 4645200.0 534.34 848.29 729.1700000000001 614.74 1088.85 783.53 849.96 776.22 1137.29 937.97 830.45 False True 624.5235286412648 891.4643376604585 832.5772704471171 765.351327596727 928.6816073908732 866.4426245348799 1004.3867299395549 886.251562074053 879.6956308789391 726.0819255515437 624.2263457459813 1.0004760819489735 1.4281107225538752 1.3337746413957363 1.2260798231482752 1.4877321563239256 1.3880263632568057 1.6090104763829907 1.4197599446318443 1.4092574542454779 1.1631709082766122 1.0 9.285925437892107 -10.638635894929212 0.9059904006686437 0.9994062594898343 1.3760477451513777 0.32011521115380637 0.15400401515168108 0.4022681982161699 0.5869715069217891 0.09857674264205368 0.02636685048857607 2.2980745070846257e-11 10.638635894929212 0.37664148566154343 HRPELIDYGK ddPTM_A549_PD325901_60min_R1 2 HRPELIDYGK 10 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;G3V2N5;G3V2W4;G3V2X9 P12814-4 ACTN1 Alpha-actinin-1 0 ; 69.34899999999999 0.013005000000000001 5498600.0 934.49 826.39 919.8900000000001 1447.75 1588.28 1366.67 1365.5900000000001 1664.38 1337.5100000000002 1161.17 1083.77 False True 1029.3587368648214 896.0327855159568 982.3192671479405 1537.1742294211895 1476.7246920685425 1355.5402926379952 1417.5582747295211 1631.1826352191492 1281.2991060163147 1087.8535280334886 950.4731605840723 1.0829961113602338 0.9427228696971711 1.033505529545199 1.6172726313245767 1.5536732159391908 1.4261741928672729 1.4914237808234605 1.7161795859830238 1.3480644789895462 1.1445389235031056 1.0 9.892502078469745 -3.7184135782293724 12.383949975090907 1.2593817085384134 1.216793170616174 0.0 0.26556253809540514 0.0 0.0 0.03963811341577141 0.0 0.00019124338486106328 3.7184135782293724 -0.04258853792223927 HRPELIEYDK ddPTM_A549_MK2206_60min_R1 2 HRPELIEYDK 10 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 69.34899999999999 0.013005000000000001 9412100.0 1090.85 1450.3400000000001 1409.24 1481.12 2358.3 2089.98 1563.45 1704.31 2299.6 2050.34 1264.31 False True 1274.9588112780689 1524.1561110969938 1609.091422583067 1843.9944664900036 2011.39719402112 2311.1402963835562 1847.5086273754039 1945.9011617304736 1778.7442717066072 1587.166769977026 950.3469338191359 1.3415719732523608 1.6037891604194534 1.6931621130366052 1.9403382079422178 2.1164872768494845 2.431891148525974 1.9440359742634896 2.0475692533783727 1.8716788663255968 1.6700919564171348 1.0 9.892310469880794 -10.462224357641354 0.7993605728121379 0.9999796055844717 1.9032693933890448 0.21206828658755117 0.33012912457675214 0.3740685317832884 0.43167636959061856 0.19757691653444623 0.057650308714181316 3.4496548324412257e-11 10.462224357641354 0.903289787804573 HRPELIEYDK ddPTM_A549_PD325901_60min_R1 1 HRPELIEYDK 10 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 100.88 0.001568 9469300.0 1082.2 1394.0 1980.6 1470.6 2078.9 2061.8 1974.4 1881.7 2066.5 2064.2 1459.6 False True 1192.0641473264664 1511.4772722434252 2115.0154263153313 1561.4356220250752 1932.8852358156573 2045.0093843876116 2049.5368724331365 1844.1680173349066 1979.652191447328 1933.8660597214232 1280.0784531667337 0.9312430377821513 1.180769247778715 1.6522545325898434 1.2197968164859767 1.509974041851866 1.59756566429858 1.6011025475531373 1.4406679627898547 1.5465084866868493 1.5107402635653395 1.0 10.322016517173394 -10.846296682194358 1.0776929272312938 0.9985637164034676 1.4268370635877057 0.0 0.2561391041453494 0.4646555392172623 0.9526962605521114 0.1502970599217509 0.03625985056204171 1.4246340423076815e-11 10.846296682194358 0.42827334718423804 HRPELIEYDKLR ddPTM_A549_MK2206_60min_R1 2 HRPELIEYDKLR 12 2 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 72.958 0.0005452000000000001 4282300.0 1112.37 1214.99 1193.24 1320.95 2269.6 1354.3 1519.45 1192.07 2071.52 1626.01 1759.4 False True 1300.110861164583 1276.8278013581212 1362.4593746154096 1644.5828092996987 1935.744846520941 1497.6111270884178 1795.5143969206276 1361.049573061265 1602.3240275376893 1258.69321168701 1322.4924230302602 0.9830762267700606 0.9654707876756629 1.0302209304863708 1.2435480012289406 1.4637095931979105 1.1324156577448692 1.3576746192666422 1.0291549118615424 1.2115941079391925 0.951758353974486 1.0 10.369043741377205 -6.061483460499885 5.838761971923266 1.151161051159458 0.9791015316018212 0.2308477500408932 0.14480115846724967 0.2650185721706374 18.473805199838104 0.02096561867530676 0.05756250514776665 8.679936329908185e-07 6.061483460499885 -0.17205951955763688 HRPS(ph)AGGPDSAGR ddPTM_A549_MK2206_60min_R1 1 HRPSAGGPDSAGR 13 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 HRPS(0.995)AGGPDS(0.005)AGR 40.856 0.02851 3107500.0 418.56 377.62 393.92 409.39 513.19 369.09 358.0 353.41 414.21 625.48 568.34 True False 489.2026951904924 396.83924505457117 449.7837793306475 509.6905683782155 437.70043081868243 408.14685881788665 423.0439659729408 403.50694977273326 320.392096357451 484.1836335852737 427.20549261396985 1.1451226719890146 0.9289188737401414 1.0528511152291757 1.193080560035731 1.024566487056373 0.9553876667655467 0.9902587239326778 0.9445265960972767 0.7499718563940908 1.1333740833308767 1.0 8.738786385760854 -7.747299863904966 1.3244801906352879 0.8846611866032568 1.0652287658797976 0.045169060912931935 0.11448226386979095 0.3572975109034839 1.2722600116283427 0.018885900636701255 0.030594468950185912 1.7893699351807814e-08 7.747299863904966 0.18056757927654088 HRPS(ph)EADEEELAR ddPTM_A549_MK2206_60min_R1 2 HRPSEADEEELAR 13 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 HRPS(1)EADEEELAR;HRPS(1)EADEEELAR 171.71 2.8373000000000005e-22 129985000.0 3792.0 4575.1 3970.9 3830.1 5150.5 3815.8 3523.0 3631.4 4723.3 5137.0 4455.3 True False 4431.996894501019 4807.953048167915 4534.033329975801 4768.474671939724 4392.868272826096 4219.585423276959 4163.083497549358 4146.162070696082 3653.4800915601927 3976.5481321985553 3348.926049975399 1.3234084086549405 1.4356701152607516 1.3538768137352892 1.423881746201817 1.3117244774211616 1.2599816658561198 1.243110010619655 1.2380572185899834 1.0909408081994019 1.1874099555670292 1.0 11.709482803880297 -8.348319446466341 0.5344421762590753 1.0084464725175277 1.397164109580281 0.722886938751589 0.0664803223483783 0.12701972390981142 0.08034814440397042 0.012347862646036297 0.016324086613597424 4.484154354271209e-09 8.348319446466341 0.3887176370627532 HRPS(ph)EADEEELAR ddPTM_A549_PD325901_60min_R1 2 HRPSEADEEELAR 13 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 HRPS(1)EADEEELAR;HRPS(1)EADEEELAR 162.79 2.6561999999999997e-19 88178000.0 2134.6499999999996 2707.4 2810.0 2783.1000000000004 3238.4 2952.3999999999996 2920.4 3154.9 3756.3 3980.0 3535.5 True False 2351.3580965537253 2935.5620996211255 3000.7034979026957 2955.0057661213023 3010.9459558735048 2928.356633265099 3031.5374201041996 3091.973044528828 3598.4357738851177 3728.7021207689513 3100.655913381055 0.758342157995122 0.9467551968448166 0.9677641059599651 0.9530260205167586 0.9710674257274398 0.9444313445511999 0.9777084284074957 0.9971996670721327 1.1605401806617321 1.2025526936663715 1.0 11.598357720447598 -8.321345359773723 2.282140286511832 1.075235041939106 0.9326461035796786 0.5100165156916413 0.07737013166558047 0.23002063090518327 2.3462162054145765 0.013505235108650098 0.016951399632168924 4.771496836501757e-09 8.321345359773723 -0.14258893835942732 HRPS(ph)PPAT(ph)PPPK ddPTM_A549_MK2206_60min_R1 3 HRPSPPATPPPK 12 1 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK 81.317 0.00039635 268562000.0 15068.0 17894.0 16938.6 15976.8 20897.199999999997 16991.7 14210.599999999999 15500.9 21745.1 25813.7 23604.9 True False 17611.110022769346 18804.728168546415 19340.748183819323 19891.11671722581 17823.24956235344 18789.750415822393 16792.482075014163 17698.200044515328 16819.86956978925 19982.367241606742 17743.15186790212 0.9925581516679884 1.059830198633689 1.0900401646681106 1.1210588099180632 1.0045142878248265 1.0589860558998878 0.9464204668953012 0.9974665254673206 0.9479640198659904 1.1262016686987517 1.0 14.114974690219452 -7.749711892702869 24.76629788294077 0.9748290882781389 1.0571094026779233 0.07094975308773022 0.05854793551071709 121.19294343260115 255936.36063872336 0.005874995374424976 0.008673055742973886 1.7794594969908885e-08 7.749711892702869 0.08228031439978445 HRPS(ph)PPAT(ph)PPPK ddPTM_A549_PD325901_60min_R1 2 HRPSPPATPPPK 12 1 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK 87.287 0.00014953 487170000.0 16350.0 19371.0 19675.4 21884.4 24266.0 23320.0 21557.4 23020.0 24137.0 22825.2 23208.0 True False 18009.839963766146 21003.462152530425 21010.690961791723 23236.14968492149 22561.639873155404 23130.089651721355 22377.77865366192 22560.848041159366 23122.6058286785 21384.012976627007 20353.563127633297 0.8848494905206469 1.0319304792395187 1.0322856410957484 1.1416256475198983 1.108486004719453 1.1364147646619411 1.0994526370314208 1.1084471008680203 1.1360470736097197 1.0506274917336074 1.0 14.312993756674272 -5.115531380455469 1.4780298629945021 1.0828344314377132 0.7531084450868388 0.6589057304786101 0.04313856613682909 1.0651659260601667 1.6067088626461352 0.008359689595688629 0.5666434461790016 7.664231593605048e-06 5.115531380455469 -0.32972598635087436 HRPS(ph)PPATPPPK ddPTM_A549_MK2206_60min_R1 2 HRPSPPATPPPK 12 1 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 HRPS(1)PPATPPPK;HRPS(1)PPATPPPK 74.76899999999999 0.00036189 38445000.0 3454.5 3179.5 3661.0 3560.1000000000004 3707.0 2827.2 2483.3999999999996 2560.4 4038.3 5721.5 5685.9 True False 4037.5351455838004 3341.322969257481 4180.1848500444285 4432.3246598189635 3161.705210633205 3126.3724274565257 2934.601634349722 2923.3445408961447 3123.631497839971 4429.009176245677 4273.934107143205 0.9446882063145753 0.7817909414356641 0.9780648800967497 1.0370596618256311 0.7397646129707321 0.731497573215106 0.6866277206859599 0.6839938257377989 0.7308562601887836 1.0362839166947586 1.0 12.061348950256784 -5.234041736021978 21.759582136886905 0.8426377987781584 0.9446889183076318 0.045232942019677314 0.1371931591684667 4535.401179396404 3601736.89415965 0.020328988645306276 1.7904650911967988 5.833890374603545e-06 5.234041736021978 0.10205111952947343 HRPS(ph)PPATPPPK ddPTM_A549_PD325901_60min_R1 1 HRPSPPATPPPK 12 1 A9Z1X7;Q8IYB3;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 HRPS(1)PPATPPPK 63.29 0.0019803 22900000.0 1759.2 2099.2 1617.8 1777.2 2566.0 1889.7 1863.2 1759.1 1983.5 1805.4 2230.1 True False 1937.7926889454077 2276.106951143042 1727.5936366217024 1886.9736076859538 2385.7730122194307 1874.3109097280392 1934.1050955821622 1724.0133705127462 1900.140392807053 1691.406735888508 1955.8118377686576 0.9907868699456245 1.163765811817461 0.883312803031541 0.9648032449986397 1.2198376991834277 0.9583288502161839 0.9889014158891378 0.8814822250383937 0.9715353778484546 0.8648105626654742 1.0 10.93355186467831 HRS(ph)EDCGGGPR ddPTM_A549_MK2206_60min_R1 2 HRSEDCGGGPR 11 1 Q9UGU0-2;Q9UGU0;A9JX13 Q9UGU0-2 TCF20 Transcription factor 20 1 HRS(1)EDCGGGPR;HRS(1)EDCGGGPR 62.287 0.0020468 22123000.0 994.0899999999999 1370.01 1351.52 784.77 1519.53 972.96 774.3199999999999 957.42 1481.85 1312.56 1254.9 True False 1161.8680888329434 1439.7376572141645 1543.185858653932 977.0386852296634 1296.0091499092189 1075.9179814014226 915.0039210395744 1093.1372169757792 1146.2133410281954 1016.0517843874902 943.2736965219243 1.2317401546518565 1.5263201576836305 1.6359894952483327 1.0357955372149554 1.373948149606964 1.1406212060917096 0.9700301454534486 1.1588759667596347 1.2151439664379047 1.0771547941323034 1.0 9.881532628038574 -6.613430969821378 1.313561510129031 1.1042503993765975 1.4546039775144637 0.4402514234014857 0.15394559559683682 0.3086358978763048 1.038812930840561 0.023876209881719686 0.07430333259261597 2.435392869674789e-07 6.613430969821378 0.35035357813786616 HRS(ph)EDCGGGPR ddPTM_A549_PD325901_60min_R1 2 HRSEDCGGGPR 11 1 Q9UGU0-2;Q9UGU0;A9JX13 Q9UGU0-2 TCF20 Transcription factor 20 1 HRS(1)EDCGGGPR;HRS(1)EDCGGGPR 73.887 0.00040643 26190000.0 1207.4 1218.62 2296.0 1496.9 1473.96 1275.5100000000002 1498.5 1857.49 1103.98 1651.25 1247.19 True False 1329.9743591590986 1321.3173841472624 2451.8203669696045 1589.3601132934407 1370.434134485952 1265.1226694539923 1555.5262375106645 1820.4409047772845 1057.5835597938642 1546.9897931959122 1093.7935365888047 1.2159281570696303 1.208013523528428 2.241575109884133 1.4530714071049926 1.252918479258802 1.1566375436807836 1.422138809086272 1.6643368642080867 0.9668950532402413 1.4143343706532432 1.0 10.09512472676886 -8.776837437617719 24.90329185595238 0.9843670406149485 1.4526071444397302 0.1334938770566877 0.3157914607766101 183.7664086796865 297204.4580883546 0.05059441098451451 0.05395817985887066 1.6717162435353665e-09 8.776837437617719 0.46824010382478165 HRS(ph)EPQHPK ddPTM_A549_MK2206_60min_R1 1 HRSEPQHPK 9 1 A0A087WZ32;A0A087X038;A8K727;Q9HB19 A0A087WZ32 PLEKHA2 Pleckstrin homology domain-containing family A member 2 1 HRS(1)EPQHPK 64.55 0.0026238000000000004 49905000.0 672.84 895.28 671.74 480.55 906.74 605.88 696.33 756.64 875.53 1193.1 687.22 True False 786.3989426413676 940.8459279499407 767.0028328786786 598.2847715727091 773.3597471512153 669.9938194494056 822.8441475584862 863.8960371128169 677.2238529341126 923.5778813560628 516.5643076928812 1.5223640714815205 1.8213529543921032 1.4848157750277502 1.1581999814211208 1.497121918092354 1.2970191890372427 1.5929171553364483 1.672388169773508 1.3110155751154804 1.7879243060385193 1.0 9.012804152833018 -9.706924823710716 0.7553023548614616 1.0299157657613005 1.5005439704748584 0.0 0.2846237661828896 0.3447558219717614 0.41647909153049373 0.07274358024956044 0.04009320265364252 1.9637001635295965e-10 9.706924823710716 0.47062820471355793 HRS(ph)IHEVDISNLEAALR ddPTM_A549_MK2206_60min_R1 4 HRSIHEVDISNLEAALR 17 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 HRS(1)IHEVDISNLEAALR;HRS(0.999)IHEVDIS(0.001)NLEAALR;HRS(1)IHEVDISNLEAALR;HRS(0.996)IHEVDIS(0.004)NLEAALR 224.97 6.121899999999999e-64 78183500.0 1308.63 1453.48 1545.7099999999998 1268.89 2707.48 2324.2999999999997 1712.6 1885.61 2849.66 2044.6000000000001 2281.12 True False 1529.4947510682687 1527.455923684969 1764.9149206670775 1579.7681069626374 2309.2132785770677 2570.2558832545287 2023.7572517465323 2152.9009919384375 2204.21655997193 1582.7234399636295 1714.654948290774 0.8920131438648462 0.8908240839987012 1.0293120038095154 0.9213329530453948 1.3467510071801732 1.4989930690233897 1.1802708491080856 1.255588475153279 1.2855161104974313 0.9230565260616089 1.0 10.743702566905844 -6.739764995032957 24.937811950273158 1.1907490888290546 0.9371843516983032 0.43514707995923774 0.1518428438098045 205.818368381267 236806.3671891317 0.023463319961347047 0.04880886650288761 1.820685799659692e-07 6.739764995032957 -0.25356473713075145 HRS(ph)IHEVDISNLEAALR ddPTM_A549_PD325901_60min_R1 3 HRSIHEVDISNLEAALR 17 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 HRS(0.998)IHEVDIS(0.002)NLEAALR;HRS(0.999)IHEVDIS(0.001)NLEAALR;HRS(1)IHEVDISNLEAALR 162.85 7.1183e-23 64590000.0 556.0 540.52 945.2299999999999 951.48 903.3100000000001 502.366 624.47 857.97 846.3199999999999 706.58 629.9200000000001 True False 612.444710694433 586.0715173551047 1009.3789919297384 1010.2507586321354 839.8646218503258 498.27489785491656 648.2345475730959 840.8571152855558 810.7521135570779 661.966418214303 552.4438333918808 1.1086099141231431 1.0608707744220032 1.8271160449604054 1.8286940636651206 1.5202715119358758 0.9019467097598335 1.173394485359863 1.5220680627800338 1.4675738320387113 1.1982510767655385 1.0 9.109683983860592 HRS(ph)LDR ddPTM_A549_MK2206_60min_R1 1 HRSLDR 6 1 Q9NRR4;H0YB67;Q9NRR4-3;Q9NRR4-2;Q9NRR4-4;H7C5U6 Q9NRR4 DROSHA Ribonuclease 3 1 HRS(1)LDR 47.198 0.030032999999999997 29561000.0 1584.1 1970.0 2297.3 2124.6 2724.5 2229.8 2493.3 2509.1 3149.1 3155.1 1641.8 True False 1851.4573524733833 2070.264585449673 2623.0916842412075 2645.1270953769194 2323.729659123327 2465.755955978552 2946.3003362020495 2864.7726087964825 2435.833878079354 2442.360718687885 1234.095748625145 1.5002542181479965 1.6775558847488692 2.1255171546968583 2.1433726664432204 1.8829411427047684 1.9980264568008994 2.387416324450028 2.3213535999844477 1.9737803009150752 1.9790690644618278 1.0 10.269238616513935 -10.445049395128052 0.8358179783987376 1.0132292817263808 2.011440197992948 0.024837195203536444 0.3725186785921011 0.28352192832204964 0.36448606572308767 0.16688224278301844 0.05174377457599758 3.588811144469999e-11 10.445049395128052 0.9982109162665673 HRS(ph)LDR ddPTM_A549_PD325901_60min_R1 1 HRSLDR 6 1 Q9NRR4;H0YB67;Q9NRR4-3;Q9NRR4-2;Q9NRR4-4;H7C5U6 Q9NRR4 DROSHA Ribonuclease 3 1 HRS(1)LDR 58.981 0.018865 42228000.0 926.08 1162.5 1444.4 1315.5 1689.9 1248.2 1400.4 1423.9 1210.5 1738.9 1196.8 True False 1020.0949598559364 1260.467954794105 1542.4256698827958 1396.7554472827333 1571.207253838511 1238.0350730393905 1453.6929883282833 1395.49919747206 1159.6268946271432 1629.1055572374692 1049.601187140276 0.9718881536665068 1.200901799881108 1.4695349898424377 1.330748730466195 1.4969564374440099 1.1795290327486367 1.3849955641618399 1.3295518474728591 1.1048262033569545 1.5521186305782486 1.0 10.035625541476549 -8.896670945657815 2.980530665022806 1.0423663214674828 1.305559020863188 0.0 0.2073179191510289 0.18053765030354277 3.0673552378795357 0.025652666040840533 0.026765532250770732 1.2686126987290387e-09 8.896670945657815 0.2631926993957052 HRS(ph)LTAHSLLPLAEK ddPTM_A549_MK2206_60min_R1 1 HRSLTAHSLLPLAEK 15 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 HRS(0.79)LT(0.204)AHS(0.005)LLPLAEK 110.77 1.0866e-06 14189000.0 1489.8 1847.8 1609.4 1405.3 2430.6 1830.1 1632.3 1749.0 3056.6 2527.8 2257.3 True False 1741.2418178870312 1941.8451274080737 1837.6371203664307 1749.598563086315 2073.06195979635 2023.7599672779374 1928.867781166567 1996.9261060878594 2364.284980387207 1956.7682243666543 1696.7501116893293 1.0262217199169092 1.1444496829734825 1.0830334459426265 1.0311468677873659 1.2217838947022992 1.192727174930331 1.1368013285386704 1.1769123174535505 1.3934196698141144 1.1532447888973139 1.0 10.72855839275276 -6.76531571484801 24.999160619948366 1.1879359447950568 1.0772884452942155 0.25174599540662557 0.09141930240751599 166.8064839118538 1075775.7720847877 0.02021336638140003 0.039245571201087646 1.7166599897791551e-07 6.76531571484801 -0.1106474995008413 HRS(ph)LTAHSLLPLAEK ddPTM_A549_PD325901_60min_R1 2 HRSLTAHSLLPLAEK 15 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 HRS(0.905)LT(0.095)AHSLLPLAEK;HRS(0.83)LT(0.17)AHSLLPLAEK 126.4 2.7798e-08 22632700.0 2676.76 3320.1 3579.3 3755.2 4715.7 4637.5 3673.6000000000004 3588.0 4158.6 3689.6 3896.6000000000004 True False 2948.5027046734363 3599.896478891962 3822.212822079401 3987.1501753220186 4384.4855002818285 4599.733737558224 3813.4008582710544 3516.434525268451 3983.8285039210546 3456.6380263289248 3417.3429025825553 0.8628056325413505 1.0534197420374312 1.1184750641180543 1.1667398587097737 1.2830101120283786 1.3459971295482556 1.1158964631232031 1.028996687049172 1.1657678545838623 1.011498735967255 1.0 11.738659302413106 -2.2047772027482244 10.481550477861163 1.1032702721557448 0.005543672263394139 0.0 0.1294952886572974 0.0 0.0 0.017784184483898628 0.0 0.006240548995509792 2.2047772027482244 -1.0977265998923507 HRS(ph)NS(ph)FSDER ddPTM_A549_MK2206_60min_R1 2 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 HRS(0.985)NS(0.845)FS(0.17)DER;HRS(0.999)NS(0.861)FS(0.14)DER 75.02 0.00045801 79032000.0 3579.4 5266.700000000001 4269.4 3760.9 7162.7 5454.9 4585.1 6120.5 9033.400000000001 5684.2 4906.799999999999 True False 4183.51521207198 5534.752534105478 4874.865118486664 4682.320668833217 6109.0763183713125 6032.133897330434 5418.153319504275 6988.099618245132 6987.349323375576 4400.1352721516505 3688.3061392093214 1.1342646337293518 1.5006217827926798 1.321708376282374 1.2695043448418808 1.6563365642096461 1.635475383457071 1.4690085678912186 1.8946636625297057 1.8944602372062005 1.192996217254061 1.0 11.848742692920904 -6.7386060619983885 24.822693036725674 1.5012670351418556 1.3214733696953478 0.13873831066468112 0.2643349436415782 595.6478523351576 647540.4657322695 0.05143738852827001 0.10701760212002315 1.8255508644836152e-07 6.7386060619983885 -0.17979366544650777 HRS(ph)NS(ph)FSDER ddPTM_A549_PD325901_60min_R1 1 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 HRS(0.894)NS(0.75)FS(0.356)DER 82.925 0.00029467 41718000.0 1799.8 1402.6 2115.1 2041.2 2268.9 2105.6 2466.6 2843.1 2901.9 3822.6 3823.8 True False 1982.5143710572668 1520.8020244251288 2258.643405129536 2167.2802880984514 2109.540291280074 2088.452691709456 2560.4678127753095 2786.3921401311977 2779.943234629083 3581.2403836310036 3353.49684106533 0.5911782431938916 0.4534973779614489 0.6735188706520493 0.6462747367341952 0.6290568893483499 0.6227686473818183 0.7635217607546357 0.8308915356681905 0.8289684965816034 1.0679122579681108 1.0 11.711450527722212 -8.143632070624175 0.24829013059317567 1.0476158563872797 0.4527089663307191 0.8854199057317701 0.059093746817300466 0.45245346988733354 0.08815547004776304 0.06433957775167982 0.09665831297449134 7.184026561445503e-09 8.143632070624175 -0.5949068900565606 down HRS(ph)NSFS(ph)DER ddPTM_A549_PD325901_60min_R1 1 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 HRS(0.889)NS(0.435)FS(0.677)DER 71.87899999999999 0.00070132 37046000.0 1751.8 2541.5 2696.9 3109.4 2935.8 2419.5 2334.3 3115.2 4286.4 4370.2 4222.1 True False 1929.6414463929991 2755.6811243950247 2879.9278517771454 3301.460576040236 2729.599535960174 2399.7963941826683 2423.133063877973 3053.064892172875 4106.257514357526 4094.2648261770028 3702.8084660970612 0.5211291548187839 0.7442137905932913 0.7777685176389175 0.8916098702561666 0.7371700591462954 0.6481016817789038 0.6544041059817691 0.8245268206894192 1.1089575796194826 1.1057187709448433 1.0 11.854404210310303 -8.614067799743436 4.313023013172383 1.0509658595567375 0.7209593630632737 0.7445665911571107 0.09185663434047622 0.08513467574545185 2.9263463028091805 0.016526173937520684 0.018787624210684226 2.4318243359638263e-09 8.614067799743436 -0.3300064964934638 HRS(ph)NSFSDER ddPTM_A549_MK2206_60min_R1 2 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 HRS(0.998)NS(0.002)FSDER;HRS(0.999)NS(0.001)FSDER 85.42 0.00023293 34108000.0 1771.1100000000001 3072.2 2631.9 2451.5 2989.0 2465.2 2359.74 2912.8999999999996 3770.0 3376.0 3236.1000000000004 True False 2070.0300685178545 3228.5618575728345 3005.1429955837016 3052.1176100520156 2549.3220595043567 2726.065827732677 2788.474213030692 3325.8124953821184 2916.1010194529113 2613.3592552661717 2432.4870581836017 0.8509932505308362 1.3272678457675666 1.235419931823899 1.2547312840920548 1.0480310885633235 1.1206907837644562 1.1463469882190924 1.3672477656944184 1.1988146081362654 1.074356900059987 1.0 11.24821641396693 -10.633761367163894 1.0047250033159532 1.0041789932111678 1.179778975483828 0.11990228933304714 0.13509371655201424 0.6449082250822203 1.200184484257419 0.0760364938750949 0.02258486049076963 2.324013426849489e-11 10.633761367163894 0.17559998227266016 HRS(ph)NSFSDER ddPTM_A549_PD325901_60min_R1 2 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 HRS(0.992)NS(0.008)FSDER;HRS(0.986)NS(0.013)FS(0.001)DER 83.087 0.00027912 24881300.0 2167.02 2013.3400000000001 2509.3 2969.0 3759.7 2646.7 2998.7 3521.1000000000004 4322.1 4504.3 4761.4 True False 2387.0142751241924 2183.0112276173454 2679.5961876467013 3152.388386911771 3495.631642260873 2625.1461527105866 3112.8171694516045 3450.8688982504864 4140.457167507621 4219.897729291354 4175.777985001429 0.5716334258425321 0.5227795240691174 0.6416998694066788 0.7549224116403046 0.8371210478182729 0.6286603746989408 0.7454460415836832 0.8264014300198255 0.9915415001418482 1.0105656345831588 1.0 12.027829294354358 -7.588888023258696 0.3770465431941588 1.0304315075919968 0.5242177542717684 0.7939103325809977 0.07558538195531914 0.4706659744601023 0.13693721337470555 0.03432949413688294 0.08878099928502611 2.576985510924237e-08 7.588888023258696 -0.5062137533202283 down HRS(ph)YER ddPTM_A549_MK2206_60min_R1 2 HRSYER 6 1 Q9NRR4;H0YB67;Q9NRR4-3;Q9NRR4-2;Q9NRR4-4;H7C5U6 Q9NRR4 DROSHA Ribonuclease 3 1 HRS(0.998)Y(0.002)ER;HRS(0.999)Y(0.001)ER 49.418 0.027927999999999998 89249000.0 2820.7 3261.8 3193.0 2874.1 4919.2 3975.1000000000004 3887.9 3680.6 5161.799999999999 5173.5 3328.4 True False 3296.7652005060722 3427.8116877257585 3645.815412781168 3578.25462902325 4195.592196424836 4395.742443542174 4594.281104207251 4202.336321364765 3992.660541700805 4004.802756848204 2501.8664208331916 1.3177223104533924 1.3701018004727052 1.457238237190541 1.4302340841329135 1.6769848947521293 1.7569852678538564 1.8363414872794155 1.6796805322505066 1.595872788592421 1.600726051359086 1.0 11.288789048128208 -10.564752485220781 0.8811728508813466 1.0032635477238698 1.573413555277087 0.0 0.2326636233222714 0.326212048107817 0.45687990915553917 0.1165372707008957 0.03317229281082314 2.72425348273376e-11 10.564752485220781 0.5701500075532171 HRS(ph)YER ddPTM_A549_PD325901_60min_R1 1 HRSYER 6 1 Q9NRR4;H0YB67;Q9NRR4-3;Q9NRR4-2;Q9NRR4-4;H7C5U6 Q9NRR4 DROSHA Ribonuclease 3 1 HRS(0.999)Y(0.001)ER 51.854 0.025619 55272000.0 666.7 854.96 1034.0 1047.3 1270.5 1001.2 1112.8 1126.2 995.71 1256.1 989.34 True False 734.3828932014005 927.0104796823812 1104.1734579471126 1111.9893424091263 1181.2644629870567 993.0465591468025 1155.1482129475257 1103.7370575131915 953.8637713747974 1176.7896316326323 867.6574519429821 0.8463972637552594 1.068406060025748 1.272591453544818 1.2815994836660498 1.3614410391356648 1.1445145280813658 1.3313413148942055 1.2720884895779392 1.0993552458274516 1.3562836681658152 1.0 9.760981774007863 -9.12432129099578 2.088314768030849 1.0346738983942863 1.2054658130213811 0.0 0.16909165191488887 0.3291433583472661 2.959866192177364 0.02866900246575965 0.027368498923865725 7.510670491407261e-10 9.12432129099578 0.17079191462709487 HRSLT(ph)AHSLLPLAEK ddPTM_A549_MK2206_60min_R1 1 HRSLTAHSLLPLAEK 15 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 HRS(0.386)LT(0.614)AHSLLPLAEK 110.74 1.4587000000000001e-06 11719000.0 1364.8 1468.8 1623.0 1254.3 2352.1 1682.7 1565.5 1844.6 2518.2 2065.4 2206.5 True False 1595.1448738436159 1543.5556462479587 1853.1658048680983 1561.6035563076668 2006.1092058080285 1860.762197114141 1849.931085839774 2106.077698850579 1947.8317207390755 1598.824705517401 1658.5651536980058 0.9617619605036405 0.930657226703686 1.117330724533916 0.9415388673914019 1.2095450102367844 1.1219108233193662 1.1153804128315916 1.269819092819345 1.1744077200682221 0.9639806443253647 1.0 10.695719971536732 -5.912759342120771 1.1402349910421916 1.107992073031667 0.9303052993247178 0.2575131123739297 0.09753951781672257 0.7794202354612952 1.5152281459473713 0.01513902495332504 0.12477280520767979 1.2224768900403139e-06 5.912759342120771 -0.17768677370694919 HRSLT(ph)AHSLLPLAEK ddPTM_A549_PD325901_60min_R1 2 HRSLTAHSLLPLAEK 15 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 HRS(0.401)LT(0.599)AHSLLPLAEK;HRS(0.41)LT(0.586)AHS(0.004)LLPLAEK 105.77 2.8056e-06 21574600.0 2194.8 2197.37 1890.6 2659.5 3320.6000000000004 2936.5 2143.2799999999997 2920.5 3342.1 2918.5 2576.8 True False 2417.614480273636 2382.5500815706846 2018.9074851013659 2823.77127483727 3087.37251144811 2912.5861175934724 2224.8436932478185 2862.248336412072 3201.643159465819 2734.2254119256736 2259.8699356810357 1.0698024882326083 1.0542863746061908 0.8933733102179382 1.249528227378403 1.366172655647856 1.2888290921555774 0.9845007706504747 1.266554455732207 1.41673779933754 1.2099038837390816 1.0 11.142024026971727 -6.276447627408383 24.26230236980782 1.2120373784575416 1.0106672834297212 0.3464865074377871 0.1320569426521946 620.3317924992167 1002827.1705463496 0.024417197188378682 0.0569697566679266 5.291178009207572e-07 6.276447627408383 -0.20137009502782033 HS(ph)DPHLLER ddPTM_A549_MK2206_60min_R1 2 HSDPHLLER 9 0 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 HS(1)DPHLLER;HS(1)DPHLLER 58.132 0.0036984 9761500.0 875.98 823.84 949.78 1087.79 1791.04 997.42 1116.49 1147.27 1676.44 1611.74 1149.3899999999999 True False 1023.8240083452017 865.7699370948519 1084.473085734825 1354.2985988327487 1527.5803885763407 1102.9663223661883 1319.3417809193538 1309.8990358670205 1296.7290167245715 1247.6468145979559 863.9647414497846 1.1850298504394563 1.0020894320780245 1.2552284065609138 1.5675391990651777 1.7681050108745981 1.276633489134458 1.527078267922623 1.5161487188342102 1.50090501905041 1.4440945963886556 1.0 9.754828626731197 -10.794781430579897 1.0381526816835676 0.9996498958239001 1.4076851511132022 0.0 0.23844652850797385 0.5094112316506425 0.9733547459891897 0.15136458593334515 0.03779487385657497 1.6040524665880505e-11 10.794781430579897 0.4080352552893022 HS(ph)DPHLLER ddPTM_A549_PD325901_60min_R1 1 HSDPHLLER 9 0 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 HS(1)DPHLLER 50.148999999999994 0.0088352 9489500.0 684.78 714.36 968.59 660.45 1035.6 1032.4 1008.6 969.97 939.34 1027.9 662.67 True False 754.298361491608 774.5616242466381 1034.3243420048302 701.244496509221 962.8630286260493 1023.9924766911292 1046.982824927098 950.6231874232553 899.8628064428415 962.9982185774892 581.1657910112355 1.297905646130891 1.3327722247706486 1.77974058005908 1.2066169539832121 1.6567785707941551 1.7619627523316024 1.8015217707589692 1.6357177282736473 1.5483753867843277 1.6570111893576198 1.0 9.18280597431646 -10.46439244761964 0.8235167421073046 1.0039049748696212 1.5641040995882303 0.0 0.2704114024607318 0.3853297593593145 0.476009690711694 0.127560991927589 0.03818664193175909 3.432476340360382e-11 10.46439244761964 0.5601991247186091 HS(ph)EGLREVPDDE ddPTM_A549_MK2206_60min_R1 6 HSEGLREVPDDE 12 1 Q6P9B6 Q6P9B6 TLDC1 TLD domain-containing protein 1 1 HS(1)EGLREVPDDE;HS(1)EGLREVPDDE;HS(1)EGLREVPDDE;HS(1)EGLREVPDDE;HS(1)EGLREVPDDE;HS(1)EGLREVPDDE 89.46600000000001 7.668699999999999e-05 31964600.0 1375.2199999999998 1473.09 1632.1799999999998 1563.21 1647.59 982.8000000000001 1429.5500000000002 884.12 1847.781 2688.38 2061.3700000000003 True False 1607.3235150990756 1548.0639889238867 1863.6476669067229 1946.1965201751643 1405.231693549275 1086.7992436701593 1689.280730605076 1009.4467175039438 1429.2615537999254 2081.073090839 1549.4749380822377 1.0373343095748526 0.9990894017556055 1.2027607682466501 1.2560361399481188 0.9069083074609193 0.7013984008126486 1.0902278501489504 0.6514766342418685 0.9224166965674846 1.3430827693248872 1.0 10.59756370496416 -6.7855631466483555 24.989136340570013 0.9249353005511302 1.1205365947278698 0.17121129485564723 0.18578491303142655 207.72903026751771 215180.23918003 0.019894796559231723 0.03761086443629374 1.6384638104558022e-07 6.7855631466483555 0.19560129417673966 HS(ph)EGLREVPDDE ddPTM_A549_PD325901_60min_R1 5 HSEGLREVPDDE 12 1 Q6P9B6 Q6P9B6 TLDC1 TLD domain-containing protein 1 1 HS(1)EGLREVPDDE;HS(1)EGLREVPDDE;HS(1)EGLREVPDDE;HS(1)EGLREVPDDE;HS(1)EGLREVPDDE 92.45700000000001 7.4465e-05 28640700.0 1919.3600000000001 2191.71 2008.73 2827.3500000000004 3020.0099999999998 3169.4 2770.08 2697.92 3168.493 2924.02 2966.1670000000004 True False 2114.212014241847 2376.4130935069147 2145.0544972747625 3001.9889881222625 2807.8949160689044 3143.5894572112206 2875.4969102459404 2644.1078691227044 3035.3322579412124 2739.396878183625 2601.347263081811 0.8127373243267584 0.9135316638546684 0.8245936741000587 1.1540131649189398 1.0794002615177172 1.208446677544703 1.1053875624584413 1.01643786919484 1.1668308576169335 1.0530685068698853 1.0 11.345043287281992 -6.256840595783977 24.996013945798392 1.0911372224812563 0.8566119518500521 0.7463627239202901 0.0641804841600511 178.47746692438608 970083.6369494944 0.010544186536545751 0.0269154324790344 5.535532490982548e-07 6.256840595783977 -0.2345252706312042 HS(ph)EKSPPSTENK ddPTM_A549_PD325901_60min_R1 1 HSEKSPPSTENK 12 1 H3BQL3;Q6PH81 H3BQL3 C16orf87 UPF0547 protein C16orf87 1 HS(0.536)EKS(0.459)PPS(0.004)T(0.001)ENK 50.155 0.012511 2803200.0 1292.8 1108.6 1141.0 1353.3 1342.6 1363.8 1121.3 1454.0 1163.2 1425.9 1462.7 True False 1424.0441042909408 1202.0256126320378 1218.4351213903822 1436.8902674327044 1248.3004077185542 1352.6936649664483 1163.9716850989034 1424.998829359066 1114.314749136962 1335.8684306543844 1282.797172819253 1.1101085459685445 0.9370348158706178 0.9498267903978772 1.1201227270206675 0.9731081687490127 1.0544875632938768 0.9073700112238303 1.1108527985194188 0.8686601223855127 1.0413715113812534 1.0 10.325077363975131 -8.774368286326197 24.99838693383761 0.937978402334709 1.014356156068705 0.028458652795836148 0.08196958928448922 302.3617678729826 584622.5571278308 0.013548302319704414 0.01446638878266167 1.6812477404754707e-09 8.774368286326197 0.07637775373399613 HS(ph)EVETDSK ddPTM_A549_MK2206_60min_R1 2 HSEVETDSK 9 0 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 HS(0.999)EVET(0.001)DSK;HS(1)EVETDSK 76.143 0.0020163 5029800.0 1151.51 1122.14 1436.89 1470.9 2559.3 1708.07 1413.15 2169.96 2728.4 2795.8999999999996 2067.08 True False 1345.8567362834576 1179.2521329525355 1640.6626083530011 1831.27056603121 2182.830360284209 1888.8168336748959 1669.9010628901146 2477.5584752237905 2110.4217563595016 2164.304248163117 1553.7669874942542 0.8661895555226775 0.7589633081690741 1.0559257736572731 1.1786005113832951 1.4048633919069418 1.2156371250498592 1.0747435595752672 1.594549565774548 1.3582614210145882 1.3929400390038345 1.0 10.601554449159313 -5.97431993878533 2.7934623165457673 1.216487489836932 0.81088841315996 0.5172671579881563 0.16691495414542068 0.19991617138953952 3.124486660823302 0.026770577202260115 0.09733865077901449 1.0609137086744649e-06 5.97431993878533 -0.40559907667697204 HS(ph)EVETDSK ddPTM_A549_PD325901_60min_R1 2 HSEVETDSK 9 0 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 HS(1)EVETDSK;HS(1)EVETDSK 84.65799999999999 0.0011352 2362900.0 951.61 915.49 900.57 1025.8 1290.5 943.17 1202.0 954.23 1145.4 1453.3 923.31 True False 1048.2167466617434 992.6415552124344 961.6880957673425 1089.161336239169 1199.8597319833111 935.4891362270171 1247.7427677596388 935.1971340710469 1097.2628212357947 1361.5383899782712 809.7487233443247 1.2944963251470498 1.2258636865924877 1.1876376807307536 1.3450608872106011 1.4817679823288856 1.1552832493064944 1.5409011855015526 1.1549226409504056 1.3550658242522626 1.6814332035684014 1.0 9.661330478233577 -10.792967354638773 0.8258956664598877 0.9808155061285752 1.3073169574953154 0.0 0.234834232665974 0.480674494866668 0.5241748995473714 0.10375206270497009 0.020608962273923306 1.6107667099029104e-11 10.792967354638773 0.32650145136674025 HS(ph)LEEGLDMVNR ddPTM_A549_MK2206_60min_R1 2 HSLEEGLDMVNR 12 0 Q7Z309;Q7Z309-2;Q7Z309-5 Q7Z309 FAM122B Protein FAM122B 1 HS(1)LEEGLDMVNR;HS(1)LEEGLDMVNR 68.044 0.0013570000000000001 3004200.0 268.0 489.4 189.43 477.63 596.5 493.75 528.23 432.5 587.69 564.69 456.93999999999994 True False 313.23184802908054 514.3083696035885 216.2940224375624 594.6493714416256 508.7556401787717 545.9982972752757 624.2025534801303 493.8081994756999 454.5791533480851 437.1261368057626 343.46918709756005 0.9119649150364956 1.4973930382218035 0.6297334100485863 1.7313034000709926 1.4812264368688863 1.5896572903355919 1.8173465828328579 1.43770742187548 1.32349325769058 1.2726793355166381 1.0 8.424036869267965 -10.098292781932734 0.9251604382900199 1.0308640121110726 1.3925369631201965 0.05662963810754551 0.3346008906560327 0.6980713243803159 1.1955951249114567 0.13386017673043077 0.06251398592165966 7.9745689620688e-11 10.098292781932734 0.3616729510091239 HS(ph)LEEGLDMVNR ddPTM_A549_PD325901_60min_R1 1 HSLEEGLDMVNR 12 0 Q7Z309;Q7Z309-2;Q7Z309-5 Q7Z309 FAM122B Protein FAM122B 1 HS(1)LEEGLDMVNR 55.841 0.0042994999999999995 1674700.0 137.34 0.0 157.48 0.0 211.88 378.08 135.63 126.65 191.02 125.28 103.01 True False 151.28265569563575 0.0 168.16753980416954 0.0 196.99827974631847 375.00104183202455 140.79147386958377 124.12386639499705 182.99209368994366 117.36979941958143 90.34042303419106 1.6745843180121034 0.0 1.8614871854266535 0.0 2.1806216213063414 4.150977261752452 1.5584548880881213 1.3739571083037767 2.0255837591184047 1.2991947068386052 1.0 6.497299764340239 -6.781875290128125 24.986825063804584 1.7372293927233444 0.8906924303798897 0.20103350915543405 0.9605315978040974 365.3628658007302 446725.545282375 0.14501553457850794 0.27427849576287505 1.6524362355863377e-07 6.781875290128125 -0.8465369623434548 HS(ph)PAPRPLVQQPEPLPIQVAFR ddPTM_A549_MK2206_60min_R1 2 HSPAPRPLVQQPEPLPIQVAFR 22 1 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 H3BMG9 FAM65A Protein FAM65A 1 HS(1)PAPRPLVQQPEPLPIQVAFR;HS(1)PAPRPLVQQPEPLPIQVAFR 65.581 0.00041931 16988900.0 460.38 504.57 517.11 509.55 835.87 607.3199999999999 675.12 689.4000000000001 875.3599999999999 815.86 902.52 True False 538.0808887896573 530.25045780728 590.4439737247949 634.3897728745686 712.9146302702933 671.5861992936111 797.7805651051722 787.1245611989538 677.0923576626786 631.5566593606218 678.3993757151699 0.7931624173775387 0.7816199082557954 0.8703486395493035 0.9351272946054731 1.0508774857269545 0.9899569830612296 1.1759747925241684 1.1602672251417767 0.9980733796355379 0.9309511210779544 1.0 9.405991032062271 -6.263774243149286 1.6147714136813172 1.0275729373500277 0.7852162930559996 0.6712052793864552 0.07058009613540918 0.19391286548094824 0.9470144688765135 0.010740821765003912 0.03991766310060557 5.447857721647453e-07 6.263774243149286 -0.24235664429402815 HS(ph)PAPRPLVQQPEPLPIQVAFR ddPTM_A549_PD325901_60min_R1 2 HSPAPRPLVQQPEPLPIQVAFR 22 1 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 H3BMG9 FAM65A Protein FAM65A 1 HS(1)PAPRPLVQQPEPLPIQVAFR;HS(1)PAPRPLVQQPEPLPIQVAFR 72.881 0.000113 26079000.0 1128.94 1231.92 1256.41 1288.39 1326.72 1427.3400000000001 1328.3 1292.5700000000002 1507.04 1523.84 1447.6799999999998 True False 1243.549157718298 1335.7382218236153 1341.6775380070912 1367.9709241540093 1233.5357641355276 1415.7162162730685 1378.84918337365 1266.7886773484515 1443.704349672771 1427.624482339838 1269.6245375996286 0.9794621330093153 1.0520734140417467 1.0567514239632507 1.0774610001948417 0.9715752394543894 1.1150668361763416 1.0860290917033812 0.9977663788252402 1.1371112536957266 1.124446196541638 1.0 10.310186200691371 -7.27526658073764 24.879316721895904 1.0655913502495016 1.033236409522346 0.1603099132720328 0.05213997335089775 1794.5216937126604 3228884.0228831824 0.008936646544489123 0.014334887366352987 5.3055867416899964e-08 7.27526658073764 -0.0323549407271555 HS(ph)PASS(ph)SSKTEK ddPTM_A549_PD325901_60min_R1 1 HSPASSSSKTEK 12 1 A0A5F9ZI40;A0A5F9ZHN5;A0A5F9ZGY4;A0A5F9ZHF7;Q01484;A0A5F9ZH30;A0A5F9ZHT4;A0A5F9ZI65;A0A5F9ZI46;A0A5F9ZHT8;A0A5F9ZH19;A0A5F9ZI30;A0A5F9ZGZ5;I6L894;A0A5F9ZHD2;A0A5F9ZHR8;D6RHE1;A0A5F9ZGY3;A0A5F9ZHE4;A0A5F9ZHS1;A0A5F9ZGX3 A0A5F9ZI40 ANK2 Ankyrin-2 2 HS(0.703)PAS(0.181)S(0.323)S(0.299)S(0.273)KT(0.221)EK 41.378 0.027737 175850000.0 6854.1 7590.3 4053.0 3585.6 3197.2 1936.5 1595.1 1769.9 2144.1 5747.4 5722.4 True False 7549.923186278268 8229.961219160168 4328.060952668908 3807.074368511564 2972.6397017412205 1920.7297860445287 1655.8024033722115 1734.5979560403096 2053.990933308597 5384.5081831425805 5018.581077282352 1.504393985075694 1.6398980294280376 0.8624072991987263 0.7585957683826361 0.5923267266115297 0.3827236735775995 0.32993437345618354 0.34563513657123657 0.4092772243147396 1.0729144553460883 1.0 12.293063807776528 -5.871895256026896 3.012365925367265 0.631582000738916 1.5903990593465187 0.6905378800008132 0.2441093585294573 0.12230403459842623 2.1804009633573505 0.03974591095504512 0.1547207768963694 1.3430888508138779e-06 5.871895256026896 0.9588170586076027 HS(ph)PNPLLVAPTPPALQK ddPTM_A549_MK2206_60min_R1 1 HSPNPLLVAPTPPALQK 17 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 HS(1)PNPLLVAPTPPALQK 62.589 0.00095992 2396400.0 1331.4 1218.9 1598.3 1472.2 1736.9 1667.0 1716.6 1231.5 2328.4 2072.7 2062.0 True False 1556.1077703952167 1280.9368036571598 1824.9629734569814 1832.8890660895693 1481.4043108575172 1843.4008335349574 2028.4839999696928 1406.0688963105767 1801.0211176907583 1604.4756304473317 1549.9484916951226 1.0039738602496124 0.8264383045763318 1.1774345942690556 1.182548372355913 0.9557764782475828 1.1893303831786672 1.3087428458678736 0.9071713697871405 1.1619877223926627 1.035179968266284 1.0 10.598004556928855 -5.762420469006173 24.999837934344082 1.0937060099353924 0.9152060810815975 0.2649148849239209 0.11936804819271644 24.907726929791487 634783.2347355213 0.016146515168714144 0.05480582122728605 1.7281424208637514e-06 5.762420469006173 -0.17849992885379484 HS(ph)PPMVR ddPTM_A549_MK2206_60min_R1 2 HSPPMVR 7 0 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256;I3L4G9 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 HS(1)PPMVR;HS(1)PPMVR 67.169 0.0072926 7479400.0 653.33 709.05 572.53 325.84000000000003 811.5699999999999 601.09 292.23 557.84 642.64 684.64 666.73 True False 763.5961316150716 745.1376164025843 653.7233630690894 405.67081462751327 692.1891280802778 664.6969448287501 345.32440831361026 636.9155283133509 497.083066085204 529.9793484968692 501.162540188113 1.5236496553163237 1.486818260843866 1.3044138590719734 0.8094595706918626 1.381166932030599 1.3263101120431986 0.689046727602569 1.2708761673892917 0.9918599779995972 1.0574999246710253 1.0 8.969134773020812 -2.0000000001725238 0.33395654058311064 0.9941989665584948 7.352371904696892 0.37804707309807617 0.2069169289630461 33.40823501466516 0.4147502899113448 0.05392792489514804 133.76760419515173 0.009999999996027494 2.0000000001725238 6.358172938138398 HS(ph)PQQPSNGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 HS(1)PQQPS(0.216)NGS(0.784)LR;HS(1)PQQPS(0.18)NGS(0.82)LR 58.688 0.0040442 7640200.0 972.4 1057.12 1141.33 957.31 1409.72 877.36 984.95 986.08 1199.8899999999999 1210.6999999999998 1277.5900000000001 True False 1071.1173321569547 1146.2072123629628 1218.787517174834 1016.4408644912444 1310.7061304699835 870.2150710477811 1022.4328112353206 966.4118608352048 1149.462796029873 1134.2561953806446 1120.4545293102815 0.9559668010948223 1.02298413936399 1.0877616942876596 0.9071683302640895 1.1697985917168947 0.776662549245492 0.9125161124251066 0.8625176975544909 1.025889731319528 1.0123179171571193 1.0 10.129868386728017 HS(ph)PQQPSNGSLR ddPTM_A549_MK2206_60min_R1 3 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HS(1)PQQPSNGSLR;HS(1)PQQPSNGSLR;HS(0.999)PQQPS(0.001)NGSLR 131.06 6.8067e-08 14590100.0 2284.02 2615.7 2580.22 2196.94 3494.0299999999997 2507.04 2664.97 2821.87 3618.2 3703.6 3707.4399999999996 True False 2669.506737072315 2748.827957441984 2946.1339944773636 2735.190398624386 2980.0628155135514 2772.333308761535 3149.1605530695756 3221.878714114433 2798.683477078121 2866.95418773809 2786.7803278613774 0.9579178919785687 0.9863812837919239 1.0571819978140427 0.9814876225724679 1.0693569154769018 0.994815874450022 1.1300354468507015 1.1561294164104272 1.004271290814615 1.028769350449032 1.0 11.444383568985572 -5.562830558385679 5.978819170789119 1.0262397467895765 0.9643168560030496 0.14023535905630735 0.05614922424816077 0.2636044406605629 24.140373208524622 0.00832499580062255 0.034488614342792955 2.7363361098255373e-06 5.562830558385679 -0.06192289078652691 HS(ph)PQQPSNGSLR ddPTM_A549_PD325901_60min_R1 4 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HS(1)PQQPSNGSLR;HS(0.997)PQQPS(0.002)NGSLR;HS(1)PQQPSNGSLR;HS(1)PQQPSNGSLR 122.46 1.056e-05 25454500.0 3972.2499999999995 4323.04 4998.83 4583.62 6437.02 5395.1 5415.5599999999995 4615.81 5393.889999999999 5659.0 4511.05 True False 4375.509895784105 4687.357752510196 5338.080664206735 4866.739797243693 5984.905921713455 5351.164094339705 5621.65209930814 4523.7440485171055 5167.203561057744 5301.6897742290175 3956.2194479020263 1.105982606223835 1.1848073177527831 1.3492883128708915 1.2301491010122083 1.5127841113281106 1.3525953665632513 1.420965690436937 1.1434512438171336 1.3060962944808079 1.3400899126160686 1.0 11.949906737963147 -10.670911554881151 0.6630460691818396 0.9710684828511826 1.2996770139643448 0.0 0.15203759338776304 0.66766924072435 0.44940775801444816 0.12531511716865695 0.023795621111764937 2.1334793571247706e-11 10.670911554881151 0.32860853111316213 HS(ph)PQVK ddPTM_A549_MK2206_60min_R1 2 HSPQVK 6 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 HS(1)PQVK;HS(1)PQVK 41.652 0.045905 5280800.0 1328.83 1211.5900000000001 905.41 773.96 2318.16 2223.7 1920.58 2294.56 2775.8 1391.01 1380.6 True False 1553.1040172256835 1273.2547558806955 1033.8107525481355 963.5802347443847 1977.161734847984 2459.0104580274055 2269.5245256098074 2619.8209067952885 2147.0857320417485 1076.7798749015983 1037.758917378412 1.4965942390060467 1.22692730899118 0.9961954893721845 0.9285203129630362 1.9052225923942843 2.369539222307394 2.1869477463446745 2.524498573727975 2.0689638952616467 1.0376011777588585 1.0 10.019255613618629 -6.76487363229634 24.999609787626714 1.7361723203624075 1.1548453268697447 0.3073565723703712 0.4855616580158561 122.38295253300736 890895.0077887069 0.0870137595547912 0.1692722616710463 1.7184083237983259e-07 6.76487363229634 -0.5813269934926628 HS(ph)PS(ph)TS(ph)PR ddPTM_A549_MK2206_60min_R1 1 HSPSTSPR 8 0 K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644 K7ER53 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 3 HS(0.924)PS(0.953)T(0.154)S(0.969)PR 42.348 0.029276 56863000.0 1120.7 1615.7 1375.5 1227.3 1411.2 1151.8 1476.0 1591.7 1931.3 1661.6 1711.9 True False 1309.846761515637 1697.9322287873276 1570.5665832384889 1527.98855509559 1203.6143494053356 1273.6827114970388 1744.1700943465378 1817.3283493768124 1493.863633652363 1286.2434059686816 1286.7879839635684 1.0179196400956767 1.3195120330214394 1.2205325219161782 1.1874439100597403 0.935363373302538 0.989815515353071 1.3554448099322 1.4122981967698143 1.1609244508570553 0.9995767927571025 1.0 10.329558653930507 -10.258935132552187 1.0584770591014045 1.0149387798449319 1.1788948755891229 0.17890261659411544 0.14464823215910574 0.6542501402548033 1.450266093012179 0.06208823877232581 0.02792404757114095 5.5088997273966946e-11 10.258935132552187 0.163956095744191 HS(ph)PS(ph)TS(ph)PR ddPTM_A549_PD325901_60min_R1 2 HSPSTSPR 8 0 K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644 K7ER53 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 3 HS(0.987)PS(0.958)T(0.086)S(0.968)PR;HS(0.949)PS(0.967)T(0.303)S(0.782)PR 50.473 0.011420999999999999 64109000.0 6046.0 6540.6 6847.6 5966.0 7385.099999999999 7038.3 6511.3 6365.299999999999 7112.3 7220.099999999999 7059.599999999999 True False 6659.785469170043 7091.799316237692 7312.319313963877 6334.506270230928 6866.396053211896 6980.982418340932 6759.091084620077 6238.339098018747 6813.394764689486 6764.221653810027 6191.313954491553 1.0756659278017444 1.1454433369661174 1.1810609779623724 1.023127936459351 1.1090369675455722 1.127544568027681 1.0917054334995602 1.0075953414530172 1.1004763794519963 1.092534105608205 1.0 12.596029903223373 -14.999999990858546 0.15466396555073061 0.6336439437834337 1.1300044418939617 0.07962092018728695 0.05231388569520096 43.450683994534714 0.43828704162272414 4.865563728810869 0.07884862858591096 1.0000000210489754e-15 14.999999990858546 0.49636049811052796 HS(ph)PSPRPR ddPTM_A549_MK2206_60min_R1 2 HSPSPRPR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 HS(0.977)PS(0.023)PRPR;HS(0.985)PS(0.015)PRPR 47.082 0.010679000000000001 10870500.0 1210.18 974.0699999999999 956.46 643.3299999999999 1033.73 1234.4 773.35 842.48 1586.81 1601.06 1463.9299999999998 True False 1414.4287979396754 1023.6460024106401 1092.1004101812325 800.9458788801812 881.6696863738506 1365.0233886715957 913.8576845954573 961.9041199867925 1227.4000686148725 1239.3794340155373 1100.39577858741 1.285381883012486 0.9302525712382372 0.9924614683483917 0.7278707302097834 0.8012296153168268 1.240484028777256 0.8304809073046303 0.8741437750893586 1.115416918620407 1.1263033338845976 1.0 10.10380679487533 -8.767373537704568 24.96900696434937 1.054502429227577 0.9523231423567423 0.0876541930357514 0.16571201500120172 290.21359999822903 1221120.19416661 0.027996779640235423 0.030184397380667544 1.7085451592317707e-09 8.767373537704568 -0.10217928687083477 HS(ph)PTEDEESAK ddPTM_A549_MK2206_60min_R1 3 HSPTEDEESAK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.844)PT(0.156)EDEESAK;HS(0.9)PT(0.1)EDEESAK;HS(0.626)PT(0.374)EDEESAK 150.69 2.6489e-12 19186300.0 2804.52 2911.7 3461.01 2380.52 5173.91 3661.7799999999997 3546.73 5066.4 4043.24 3956.5 2796.99 True False 3277.8544120690945 3059.8930931237633 3951.8332608173378 2963.7475068656045 4412.83469283713 4049.2671291071583 4191.124931383262 5784.577715199269 3127.4525957275278 3062.7239020914103 2102.420190003075 1.5590862510049908 1.4554146253320028 1.8796591088727883 1.409683716394138 2.098930895840891 1.9260027792547199 1.9934763523066874 2.7513899184876114 1.4875487833490382 1.456761077854247 1.0 11.03783532001899 -9.331171461591213 1.9499343622463146 1.1527018521475774 1.8659100312524073 0.29484771518265507 0.3740969226781928 0.2152496403783116 1.6779871184377777 0.08093237633001112 0.07134017987079082 4.664751772669934e-10 9.331171461591213 0.7132081791048299 HS(ph)PTEDEESAK ddPTM_A549_PD325901_60min_R1 3 HSPTEDEESAK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.866)PT(0.134)EDEESAK;HS(0.578)PT(0.422)EDEESAK;HS(0.956)PT(0.044)EDEESAK 171.62 1.2477e-15 22388400.0 3352.9 4388.5 4514.1 4160.849999999999 4871.0 3352.79 4124.400000000001 3400.42 4716.5 4382.1 3622.8999999999996 True False 3693.283939725477 4758.334296442088 4820.453971488453 4417.856254524028 4528.877764037747 3325.4859898539826 4281.356298958277 3332.5959555221166 4518.281907070566 4105.413458146138 3177.3062674553034 1.1623946918669 1.4976001354295083 1.5171511858531481 1.3904407956436249 1.4253828189074493 1.046636902434135 1.3474798897454743 1.048874636246881 1.422047963506284 1.292105045143839 1.0 11.63358844592621 -13.42744596701554 0.31040149315273413 7.438522474522849e-14 1.3567679207314194 0.025115030722854814 0.1789831752226355 14.559296405441511 0.4595163235094069 9.173717583486587 0.057467271809197126 3.7372661989066145e-14 13.42744596701554 1.356767920731345 HS(ph)PTEDEESAKAEADAYIR ddPTM_A549_MK2206_60min_R1 4 HSPTEDEESAKAEADAYIR 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.968)PT(0.032)EDEESAKAEADAYIR;HS(0.754)PT(0.246)EDEESAKAEADAYIR;HS(0.507)PT(0.493)EDEESAKAEADAYIR;HS(0.752)PT(0.248)EDEESAKAEADAYIR 162.81 3.3014000000000004e-27 32738100.0 4439.910000000001 6320.44 5522.5599999999995 4693.95 9345.64 7269.2 6555.5 6943.05 10071.39 9032.15 7176.09 True False 5189.258262622373 6642.123399218032 6305.742050112361 5843.967960719424 7970.908736094446 8038.421919095561 7746.54949423356 7927.248599698865 7790.236245704994 6991.781041899388 5394.068802991488 0.9620304175105201 1.2313753572320745 1.1690140189934672 1.0834062697677171 1.4777172904568574 1.490233479157245 1.436123597447888 1.4696231896972662 1.4442226323447374 1.296197971746639 1.0 12.397158208367891 -6.710156832632965 24.99998682319054 1.2887136989650434 1.1241331570495672 0.30673913336709835 0.15949824314571825 189.52875231420785 92393.13949364227 0.03153871230127834 0.06565300247312414 1.9491405980572418e-07 6.710156832632965 -0.16458054191547622 HS(ph)PTEDEESAKAEADAYIR ddPTM_A549_PD325901_60min_R1 1 HSPTEDEESAKAEADAYIR 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.966)PT(0.034)EDEESAKAEADAYIR 191.65 2.3183e-44 13845000.0 1080.2 1256.9 1431.0 1118.3 1660.4 1479.4 1225.2 1704.7 1698.3 1762.6 1346.8 True False 1189.86110879879 1362.8233740909345 1528.1162653020483 1187.3748511564274 1543.7792320690357 1467.3522568935075 1271.825656455166 1670.69842118872 1626.9263569973361 1651.3091351928024 1181.1521380686197 1.0073732844817187 1.1538084977938383 1.293750581360986 1.0052683417209767 1.3070113343682987 1.242305888971147 1.076767010331804 1.4144650526735616 1.3774062667808666 1.3980494823410028 1.0 10.205979087416559 -5.311847817981299 3.7200750344942 1.1982202663441468 0.9960313358449455 0.13750477967087593 0.14564566878136367 0.4192242256501834 10.30960837932548 0.02208858297080061 0.21020830634161017 4.876993558948748e-06 5.311847817981299 -0.20218893049920128 HS(ph)PTGPPGFPR ddPTM_A549_MK2206_60min_R1 2 HSPTGPPGFPR 11 0 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 HS(0.986)PT(0.014)GPPGFPR;HS(0.956)PT(0.044)GPPGFPR 61.11 0.0024475 14152300.0 1688.02 1657.8600000000001 1472.17 1571.1399999999999 2032.29 1597.52 1661.8600000000001 1636.1 2255.27 2675.28 2169.17 True False 1972.9165078733167 1742.2379927074082 1680.9458428543862 1956.0693705311542 1733.3428331582845 1766.5685060520477 1963.7984505357301 1868.0221853461092 1744.454945926144 2070.9323899373458 1630.5052229535918 1.2100031818968733 1.0685264715383231 1.030935577016689 1.1996707173913963 1.0630710093761042 1.0834485417053636 1.2044110149971747 1.145670776792892 1.069886144103321 1.270116992441115 1.0 10.671103347102147 -9.460986658757403 1.107408973960588 1.0153967675025353 1.1208132706094731 0.0 0.09719204254021041 0.3344953827059664 0.8552240274075539 0.015595773553265729 0.01185354791831814 3.4595000502090694e-10 9.460986658757403 0.10541650310693784 HS(ph)PTGPPGFPR ddPTM_A549_PD325901_60min_R1 2 HSPTGPPGFPR 11 0 P98175-5;P98175-2;P98175 P98175-5 RBM10 RNA-binding protein 10 1 HS(0.961)PT(0.039)GPPGFPR;HS(0.876)PT(0.124)GPPGFPR 79.46600000000001 0.00029541 18699800.0 1617.6100000000001 1583.85 1461.32 1774.51 2251.6 2066.15 1432.21 2068.2400000000002 1912.38 2321.0 1749.63 True False 1781.8285763784563 1717.3265980220574 1560.49396283102 1884.1174524953863 2093.4553835983147 2049.3239594298493 1486.7135352853845 2026.9873306971072 1832.0093190805903 2174.4516638956616 1534.4366018183837 1.16122658587973 1.1191903243098738 1.0169817123638456 1.2278887575170023 1.3643153331440778 1.335554663517084 0.9688986390989077 1.320997770970157 1.193929626619678 1.417101013700291 1.0 10.583493323994212 -10.560036299652266 0.8389353219901373 0.9987268599675517 1.1900065039714156 0.0 0.1709649644426665 0.7090169533511808 0.8862309577248475 0.08340167788027425 0.022770978820175806 2.7539985061557e-11 10.560036299652266 0.19127964400386388 HS(ph)PTPQQSNR ddPTM_A549_MK2206_60min_R1 3 HSPTPQQSNR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 HS(0.58)PT(0.419)PQQSNR;HS(0.998)PT(0.002)PQQSNR;HS(0.892)PT(0.104)PQQS(0.004)NR 158.3 1.2315e-08 82793000.0 2204.25 3050.92 2786.71 2323.4799999999996 3244.44 3262.6099999999997 3030.84 3574.7599999999998 4811.0 3355.23 2750.7300000000005 True False 2576.27351126157 3206.1987964670643 3181.907381444223 2892.7327043049804 2767.1871738836808 3607.857224654758 3581.504396171588 4081.493177243356 3721.316181588315 2597.281212691562 2067.647824714123 1.2459924173101242 1.5506503371338682 1.53890200420575 1.3990451709081237 1.3383261601942669 1.7449089644430076 1.7321636467113415 1.9739788993358534 1.799782408352269 1.256152610539789 1.0 11.013774761994874 -10.862558386640153 1.1502125970680934 1.0052112294764917 1.6090202538939735 0.3896644111334602 0.21617215049427183 0.3211462624879362 0.7646087856323939 0.1508913978891618 0.03796947100206991 1.3722764594740177e-11 10.862558386640153 0.6038090244174819 HS(ph)PTPQQSNR ddPTM_A549_PD325901_60min_R1 5 HSPTPQQSNR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 HS(0.816)PT(0.184)PQQSNR;HS(0.999)PT(0.001)PQQSNR;HS(0.766)PT(0.234)PQQSNR;HS(0.844)PT(0.156)PQQSNR;HS(0.993)PT(0.007)PQQSNR 147.26 3.5702e-08 211581000.0 3934.8300000000004 4706.87 4618.17 5283.07 5686.18 4916.45 4259.45 4838.05 5154.8099999999995 5688.650000000001 4629.02 True False 4334.291044931255 5103.5344536617 4931.586787512206 5609.393235177489 5286.802333056078 4876.412061243805 4421.545700610474 4741.551297373198 4938.171262034644 5329.467668168915 4059.6798857754675 1.0676435499552528 1.2571273098511409 1.2147723284271192 1.3817328934805904 1.3022707409961733 1.2011814227841089 1.0891365390909102 1.1679618666454243 1.216394248063076 1.3127802728590994 1.0 11.987150257045004 -7.604237085369028 4.216167139080997 1.1100408508532817 1.2515881350784732 0.05755688285229932 0.10585343173653042 0.21905667905280704 7.438337862113689 0.016288672888253104 0.024587288876277907 2.4874989988773223e-08 7.604237085369028 0.14154728422519147 HS(ph)PVQMNR ddPTM_A549_MK2206_60min_R1 3 HSPVQMNR 8 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 HS(1)PVQMNR;HS(1)PVQMNR;HS(1)PVQMNR 88.49600000000001 0.00082508 112457000.0 5439.7 5722.200000000001 5324.9 4594.1 8750.1 7102.9 6477.900000000001 6829.8 9654.8 9448.2 9068.099999999999 True False 6357.788372103695 6013.435538507676 6080.050889921215 5719.654706236984 7462.971881187378 7854.524163476569 7654.850578704226 7797.945065385286 7468.003215547468 7313.845057940115 6816.240503171939 0.9327412037684258 0.8822217372918872 0.8919947714714381 0.8391216101567046 1.0948809505349 1.1523249744226989 1.1230311746104087 1.1440243432954735 1.0956190897419524 1.0730027871722858 1.0 12.734760524951797 -6.765882882887457 24.99999040391486 1.0708328620717351 0.8866038816191147 0.8103040658445441 0.04802348130751319 50.83263207429183 285996.1103723617 0.009107721777221597 0.017636340995710927 1.71441957633251e-07 6.765882882887457 -0.18422898045262037 HS(ph)PVQMNR ddPTM_A549_PD325901_60min_R1 2 HSPVQMNR 8 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 HS(1)PVQMNR;HS(1)PVQMNR 50.978 0.007360800000000001 96266000.0 2245.77 2271.47 1789.72 2273.91 2190.3199999999997 2632.0699999999997 1866.1200000000001 2138.81 2302.04 2431.6 2842.32 True False 2473.758917151507 2462.8947486246575 1911.1811616606449 2414.3642562756963 2036.4794793937904 2610.635294580027 1937.1362177800456 2096.149756686013 2205.2932643597405 2278.0683610205474 2492.732658950995 0.9923883767754411 0.9880300399566739 0.7667012163530278 0.9685612484780948 0.8169666619005957 1.0472985481237482 0.7771135066667124 0.8409043581785967 0.8846890405358527 0.9138839469368594 1.0 11.28351244936585 -10.640662428688254 0.9950578138193104 0.9978997199873002 0.8961436070377578 0.029016954658159566 0.09182354599987057 0.7428037143476657 1.3493202359450256 0.05075405379236247 0.01481694776732031 2.287376059488094e-11 10.640662428688254 -0.10175611294954245 HS(ph)S(ph)ISPVRLPLNSSLGAELSR ddPTM_A549_PD325901_60min_R1 1 HSSISPVRLPLNSSLGAELSR 21 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HS(0.687)S(0.711)IS(0.602)PVRLPLNSSLGAELSR 65.423 0.0039802 9098700.0 273.81 449.53 360.23 472.65 524.67 363.91 250.78 408.27 455.61 403.59 330.92 True False 301.6069896317316 487.4134707256724 384.677374038964 501.84451703396707 487.81898921323824 360.94643761397606 260.3235701320814 400.12673456838115 436.4622961264537 378.1072585228999 290.218937874716 1.0392395197929216 1.6794681776972216 1.3254730268671322 1.7291928662856841 1.6808654624179755 1.2437039438473594 0.896990293047175 1.3787064948225778 1.5039070135211823 1.3028345472276663 1.0 8.180997853516049 -7.351061817961269 8.67382528772299 1.2267846997594767 1.5051271955182075 0.23956370812290573 0.23871306310435822 0.4422442318649023 39.57613783048051 0.03995369102034043 0.06391778395993293 4.455928177042156e-08 7.351061817961269 0.2783424957587308 HS(ph)SIS(ph)PVRLPLNSSLGAELSR ddPTM_A549_MK2206_60min_R1 1 HSSISPVRLPLNSSLGAELSR 21 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HS(0.558)S(0.558)IS(0.882)PVRLPLNS(0.002)SLGAELSR 59.691 0.0067591000000000005 4456800.0 128.82 121.38 185.92 118.4 250.77 133.35 196.14 211.16 285.25 145.76 0.0 True False 150.56166665338122 127.55772354410216 212.2862516580879 147.40800531517797 213.88206519301025 147.46100848943394 231.7760991227168 241.09257665037862 220.64133045064779 112.83271476528348 0.0 0.0 HS(ph)SNPPLESHVGWVMDSR ddPTM_A549_PD325901_60min_R1 1 HSSNPPLESHVGWVMDSR 18 0 Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8 Q6PKG0 LARP1 La-related protein 1 1 HS(0.5)S(0.5)NPPLESHVGWVMDSR 89.51100000000001 7.670499999999999e-06 38929000.0 342.64 509.82 518.58 690.45 513.66 805.9 482.49 752.11 428.26 594.72 668.5 True False 377.4245605617635 552.7843206134459 553.7739572748685 733.097528374278 477.58229363080005 799.3370175952934 500.8514209786585 737.108576031119 410.26172151426675 557.1692777044499 586.2787379706508 0.6437630023360278 0.9428694660271277 0.9445574628745799 1.2504248933055746 0.8145993751775932 1.3634078226376143 0.8542889048173724 1.2572664302692464 0.6997724715966154 0.9503487703358293 1.0 9.195442926569628 -8.783252957389834 24.996993599689798 0.8582259344769947 1.0127894535969326 0.06044314500519765 0.21383802495438342 419.28174909040854 480468.48959203326 0.036819057507831994 0.0392128578345494 1.6472026891109982e-09 8.783252957389834 0.15456351911993793 HS(ph)SPHQS(ph)EDEEDPR ddPTM_A549_PD325901_60min_R1 1 HSSPHQSEDEEDPR 14 0 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 2 HS(0.5)S(0.5)PHQS(1)EDEEDPR 56.215 0.005051 58699000.0 175.11 153.18 139.55 158.61 198.52 122.15 305.16 139.54 225.61 176.55 261.69 True False 192.8870382908313 166.08901618525672 149.02070218232075 168.4069794705543 184.5766400568206 121.15525089870343 316.77303078995936 136.75676523298768 216.12839627990877 165.40260286978852 229.50378898958786 0.8404525221131849 0.723687469023842 0.6493169582881332 0.7337873601650846 0.8042422343850475 0.5279008744565868 1.3802518563400743 0.5958802067498418 0.9417203839267076 0.7206966107095187 1.0 7.842374161763981 HS(ph)SPHQS(ph)EDEEDPRNGPLEEDGERYDEDEEAAK ddPTM_A549_MK2206_60min_R1 1 HSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAK 33 2 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 2 HS(0.569)S(0.569)PHQS(0.861)EDEEDPRNGPLEEDGERYDEDEEAAK 64.914 0.00035456 7263100.0 258.23 396.17 284.1 378.44 804.93 492.3 517.7 613.29 699.82 728.37 593.34 True False 301.8129108826473 416.3333608211151 324.3896519796837 471.1578169888171 686.5258632843236 544.3948592377077 611.7593887826577 700.2257356218544 541.311887382901 563.8307111250655 445.9973026490708 0.6767146552007878 0.933488517415325 0.7273354570821855 1.0564140504669008 1.5393049671076389 1.220623658493424 1.3716661180438021 1.5700223554329904 1.2137111237393015 1.264202065295249 1.0 8.800891174658922 -6.430646748241375 4.868196526821916 1.197751404944543 0.7997437684404789 0.5788913393872501 0.18348738429863545 0.17430366777563636 6.829362906408706 0.03064332187591016 0.07243719923011303 3.70982353258496e-07 6.430646748241375 -0.3980076365040641 HS(ph)SPHQS(ph)EDEEDPRNGPLEEDGERYDEDEEAAK ddPTM_A549_PD325901_60min_R1 1 HSSPHQSEDEEDPRNGPLEEDGERYDEDEEAAK 33 2 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 2 HS(0.504)S(0.504)PHQS(0.992)EDEEDPRNGPLEEDGERYDEDEEAAK 51.577 0.0026583 6891100.0 352.46 669.23 655.63 433.38 619.55 739.41 462.76 396.44 723.74 563.5 707.66 True False 388.24147973266156 725.6283607628895 700.1249944234675 460.1488983226079 576.0349453314685 733.388490110604 480.37058503198847 388.53269319883634 693.3237246736461 527.9205138324885 620.6223062263434 0.6255680400747122 1.1691947799540579 1.1281015641873 0.7414314530853968 0.9281570120062463 1.1816985673137155 0.7740143726912635 0.626037268240141 1.117142773822229 0.8506309047163925 1.0 9.277571740498589 HS(ph)SPMGR ddPTM_A549_MK2206_60min_R1 1 HSSPMGR 7 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 HS(0.614)S(0.386)PMGR 41.028999999999996 0.034012 5288600.0 388.95 205.94 185.0 258.2 293.73 212.59 365.1 262.35 367.52 372.55 497.13 True False 454.59525108548837 216.42146635913986 211.2357818241516 321.45901159103863 250.52270610177817 235.08613269417904 431.433944069052 299.53891591317904 284.27730680884184 288.390696252788 373.67890090998844 1.2165397885148217 0.5791642659837285 0.5652868848354752 0.8602546485986146 0.6704224014031874 0.6291126743353552 1.1545579453868484 0.8015944041361109 0.7607528980538251 0.771760716354321 1.0 8.54565529667811 HS(ph)SPMGR ddPTM_A549_PD325901_60min_R1 1 HSSPMGR 7 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 HS(0.5)S(0.5)PMGR 41.028999999999996 0.034012 5012500.0 516.33 430.72 307.11 351.87 625.83 408.27 360.08 403.22 436.36 570.2 503.83 True False 568.7474414979436 467.0182860119717 327.9523314024545 373.60421074524925 581.873859796293 404.9451844814873 373.7830414433367 395.17746078002926 418.02130668277545 534.1974746890592 441.86210404151535 1.2871604880705194 1.056932200657997 0.7422051549631004 0.8455221828893186 1.3168675350842551 0.916451491942021 0.8459269034943484 0.8943456729271814 0.9460447113688212 1.208968747948723 1.0 8.787452394561038 HS(ph)SPTEERDEPAYPR ddPTM_A549_MK2206_60min_R1 2 HSSPTEERDEPAYPR 15 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 HS(0.5)S(0.5)PTEERDEPAYPR;HS(0.561)S(0.438)PT(0.001)EERDEPAYPR 124.43 1.001e-07 30143000.0 889.29 822.88 596.82 744.33 1642.17 792.64 790.7900000000001 1032.36 1646.2 1476.3 1096.6799999999998 True False 1039.3804109469447 864.7610771953433 681.4580503150823 926.6908834142439 1400.6089683694452 876.516638688151 934.4663068484408 1178.700191469903 1273.3383284412148 1142.8028046651202 824.3440891717773 1.2608574800253805 1.0490292689114482 0.826666994118617 1.1241554292519946 1.6990586658741547 1.0632897720765995 1.1335876839819448 1.4298643090340455 1.5446684766315777 1.3863177035857683 1.0 9.687102847720803 -6.532639633851 24.998750016017453 1.2820627668961968 1.0341260034986386 0.23682947512870545 0.21735938287311576 284.61302081345457 728925.3029843225 0.03658020392593419 0.07621785356395024 2.93332623272423e-07 6.532639633851 -0.2479367633975582 HS(ph)SPTEERDEPAYPR ddPTM_A549_PD325901_60min_R1 2 HSSPTEERDEPAYPR 15 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 HS(0.499)S(0.499)PT(0.002)EERDEPAYPR;HS(0.56)S(0.44)PTEERDEPAYPR 109.04 1.4383e-06 34657000.0 931.1400000000001 1017.8199999999999 753.0699999999999 1055.06 1169.95 1030.45 1406.95 775.49 1134.19 1057.4299999999998 974.81 True False 1025.668647330962 1103.5952634396003 804.1778587777873 1120.2286599848874 1087.7767481083881 1022.0583568446085 1460.4922521625813 760.0222435898639 1086.5239385519699 990.6636893378667 854.914549829723 1.1997323563334472 1.2908837072189356 0.9406529096246623 1.3103399166712137 1.2723806704717393 1.1955093723088188 1.7083488080223617 0.8890037533473267 1.2709152496800733 1.1587867928264661 1.0 9.739636417144434 -10.85306856260727 0.7221040903451665 0.9716265760137424 1.2359913302383867 0.054869004874060656 0.20616729194291702 1.3825842311740746 1.0412134748428892 0.22887090503091265 0.036606645810157594 1.402592258107e-11 10.85306856260727 0.26436475422464434 HS(ph)SYER ddPTM_A549_MK2206_60min_R1 2 HSSYER 6 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 1 HS(0.606)S(0.394)YER;HS(0.866)S(0.134)YER 60.681999999999995 0.019524 43120000.0 483.28 572.4100000000001 294.69 513.9300000000001 939.2 981.1800000000001 970.21 938.1 1198.6299999999999 1121.29 914.8100000000001 True False 564.8458489384105 601.5432240392114 336.4814732203203 639.8428730711944 801.0449241507171 1085.0078163454277 1146.4845983983437 1071.0785478107603 927.1422188187903 867.9898102302735 687.6374295284262 0.8214297603400899 0.8747970924906499 0.48932978161336477 0.930494539120698 1.1649233880419576 1.5778777735957648 1.6672806760745842 1.5576210686281193 1.3483009781108246 1.262278306789569 1.0 9.425504265604904 -6.689835578421026 3.144706284202133 1.271026842181167 0.7404704537437299 0.6243414081835095 0.21548344603483296 0.18106991487701254 3.607137956654989 0.03955332697467991 0.08634213703560767 2.0425110821302502e-07 6.689835578421026 -0.5305563884374371 HS(ph)SYPAGTEDDEGMGEEPSPFR ddPTM_A549_PD325901_60min_R1 2 HSSYPAGTEDDEGMGEEPSPFR 22 0 Q92934 Q92934 BAD Bcl2-associated agonist of cell death 1 HS(0.402)S(0.386)Y(0.093)PAGT(0.119)EDDEGMGEEPSPFR;HS(0.551)S(0.449)YPAGTEDDEGMGEEPSPFR 114.9 2.1089000000000004e-15 15175900.0 4243.91 4527.26 4559.4 5532.709999999999 5391.900000000001 4847.200000000001 4572.98 4865.929999999999 5163.879999999999 4859.15 5265.17 True False 4674.748618998583 4908.78808862035 4868.828301899486 5874.452931003909 5013.191545045188 4807.726010284037 4747.007256330676 4768.875208901759 4946.860081476421 4552.342439732275 4617.587468662574 1.0123790075930201 1.0630633684654638 1.0544095450150035 1.2721909375558338 1.0856733259667295 1.0411770308438866 1.028027576856186 1.0327633729227448 1.0713083650387714 0.9858703209472292 1.0 12.172923574383182 -7.227234553893866 4.794533267819539 1.0342627483694897 1.1036725323946026 0.2256964027482692 0.06461801022729746 0.2615646030271551 15.228515803632096 0.009722546266734465 0.016792425417888297 5.9260518375176676e-08 7.227234553893866 0.06940978402511289 HS(ph)TSGTDEGEDGDEPDDGSNDVVDLLPR ddPTM_A549_PD325901_60min_R1 2 HSTSGTDEGEDGDEPDDGSNDVVDLLPR 28 0 Q14008-2;Q14008;Q14008-3 Q14008-2 CKAP5 Cytoskeleton-associated protein 5 1 HS(0.25)T(0.25)S(0.25)GT(0.25)DEGEDGDEPDDGS(0.001)NDVVDLLPR;HS(0.258)T(0.258)S(0.236)GT(0.248)DEGEDGDEPDDGSNDVVDLLPR 74.456 2.6198000000000003e-06 1831590.0 302.92 416.77 584.69 283.54 895.57 676.4200000000001 650.59 772.85 643.53 683.95 567.02 True False 333.67221540208243 451.8926705544423 624.3705794265934 301.0536218339383 832.6682527487748 670.9114597863364 675.3485584665083 757.4349004609039 616.4846720358569 640.7652802763627 497.2801346359286 0.6709944599865674 0.9087285798884454 1.2555711276978938 0.6054004591483375 1.6744450356103453 1.349161997547977 1.358084732182089 1.5231553559151145 1.2397130492397428 1.288539870480616 1.0 8.95791498923498 -5.138417731135518 0.9538336364316103 1.1966022015046935 0.2846707814052742 0.31064207427712276 0.26703323226698533 2.638986491845073 1.5549002891122041 0.041690307586251175 2.61291533661258 7.270801177277399e-06 5.138417731135518 -0.9119314200994193 HS(ph)WGPGK ddPTM_A549_MK2206_60min_R1 2 HSWGPGK 7 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 HS(1)WGPGK;HS(1)WGPGK 69.423 0.006771600000000001 55960000.0 2484.0 2732.3 1825.76 1402.1399999999999 4729.5 3695.2 3352.5 3144.6000000000004 4985.8 4214.1 3974.3 True False 2903.2384720307336 2871.3623994031177 2084.6802217473687 1745.6643629444557 4033.7968151307678 4086.223611324755 3961.605854537105 3590.3566799336104 3856.5242606865586 3262.1318831804397 2987.371624900061 0.9718370650078925 0.9611667913928104 0.697830897358513 0.5843479091768018 1.3502828980193295 1.3678323705245259 1.3261175213410672 1.2018446751008829 1.290942254569876 1.091973913118215 1.0 11.544661002743124 -6.767185141039308 24.99993127237151 1.1898266850110333 0.8074675421502517 0.6507098084612346 0.1490665564389592 86.3467032135042 375698.3308343332 0.025941319061550186 0.04998917501782719 1.7092864857982804e-07 6.767185141039308 -0.38235914286078154 HS(ph)WGPGK ddPTM_A549_PD325901_60min_R1 3 HSWGPGK 7 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 HS(1)WGPGK;HS(1)WGPGK;HS(1)WGPGK 58.981 0.00966 88144370.0 7879.000000000001 8201.5 7267.799999999999 7968.0 7033.200000000001 9587.2 8246.199999999999 6410.400000000001 11146.6 8823.0 9902.7 True False 8678.87027978676 8892.669188166748 7761.036612831749 8460.16526335904 6539.212295222798 9509.125021826028 8560.013653493777 6282.539543138483 10678.147165345643 8265.914274257402 8684.730678387376 0.9993252066393724 1.0239430003623307 0.893641599289393 0.9741425009773551 0.7529551044681367 1.0949245720987322 0.985639505758772 0.7234006183718591 1.229531180732989 0.9517755449605098 1.0 13.084265394970293 -8.78181323541619 24.99997274930944 1.1083897044560487 0.93563868290809 0.14608554332491674 0.12516971726117643 227.44622048807736 279089.3484419711 0.02200052300002712 0.023434670096786833 1.652672362880366e-09 8.78181323541619 -0.17275102154795863 HS(ph)YIDLQR ddPTM_A549_MK2206_60min_R1 2 HSYIDLQR 8 0 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 HS(0.958)Y(0.042)IDLQR;HS(0.715)Y(0.285)IDLQR 52.79 0.0081128 6184300.0 462.12 575.3499999999999 397.97 614.54 826.6600000000001 524.71 831.02 705.11 1068.93 698.6099999999999 620.9100000000001 True False 540.1145582507417 604.632857481456 454.40813023004137 765.1023275877486 705.0594090698804 580.234463925691 982.0055771028856 805.0615018088113 826.8190617304507 540.7935157942828 466.7209107557798 1.1572538230097995 1.2954912530110336 0.973618536812932 1.6393144381484597 1.5106659950764785 1.2432150575514052 2.1040530956984225 1.72493128817636 1.7715492121224 1.158708562936583 1.0 8.866416296390776 -6.262705291873767 24.99690346766104 1.4667373364739642 1.1574582116254573 0.22100215804914625 0.30346428345433646 188.76724202557457 3727476.737153414 0.05214755160173545 0.1276700655644705 5.461283328970963e-07 6.262705291873767 -0.30927912484850695 HS(ph)YPPALGSPGALAGAGVGAAGPLER ddPTM_A549_MK2206_60min_R1 2 HSYPPALGSPGALAGAGVGAAGPLER 26 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HS(0.993)Y(0.007)PPALGSPGALAGAGVGAAGPLER;HS(1)YPPALGSPGALAGAGVGAAGPLER 201.51 8.920199999999999e-69 33500000.0 5096.8 5018.2 4701.8 5237.5 6994.8 5539.1 5453.6 5943.200000000001 7929.6 7524.799999999999 7084.6 True False 5957.0152352038 5273.604945534797 5368.5859404367375 6520.687735120313 5965.874185955533 6125.243885442996 6444.448527458183 6785.666800286654 6133.558260969175 5824.942453799428 5325.298294987032 1.1186256440904794 0.9902928725136586 1.0081286799446436 1.2244737053055903 1.120289203624801 1.150216109247625 1.2101572851843179 1.2742322447315935 1.1517774068624471 1.0938246331257604 1.0 12.378646624394058 -4.85805289223305 19.30778676681638 1.1024512149632169 10.045686945551392 0.0 0.0919873834270899 6697.836921927191 926847.446785021 0.014295717675318185 46100.21030712306 1.3865869477343209e-05 4.85805289223305 8.943235730588174 HS(ph)YPPALGSPGALAGAGVGAAGPLER ddPTM_A549_PD325901_60min_R1 1 HSYPPALGSPGALAGAGVGAAGPLER 26 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HS(1)YPPALGSPGALAGAGVGAAGPLER 190.35 4.6011e-58 33644000.0 7693.4 8001.2 7127.2 8015.3 9902.5 8704.6 8376.7 10027.0 8752.2 8849.9 9681.9 True False 8474.428304418258 8675.489204213845 7610.894651335263 8510.386876932947 9206.982561770434 8633.712623600932 8695.479902406127 9827.003618970673 8384.375470595358 8291.115803666618 8491.08767862086 0.9980380164670132 1.0217170676563945 0.8963391899129984 1.0022728770497424 1.0843113285653707 1.0167970171052618 1.0240713830219765 1.1573315446634036 0.9874324453986991 0.9764492038566818 1.0 13.051733654464467 -6.510274236677735 24.904495418767173 1.0167796661166801 0.9723843306443644 0.14650340926176342 0.05721775165111221 1061.5891006238894 2097528.326127654 0.008334000075228871 0.01851224031082041 3.0883446712798096e-07 6.510274236677735 -0.04439533547231578 HSAIS(ph)PK ddPTM_A549_MK2206_60min_R1 1 HSAISPK 7 0 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 HSAIS(1)PK 89.88600000000001 0.0038733000000000005 96672000.0 3101.9 4191.5 4209.6 3926.4 5983.2 4894.4 3919.1 5234.9 6509.0 6520.8 4563.1 True False 3625.4248858261385 4404.82944665599 4806.584579280802 4888.368176262791 5103.0792058971165 5412.322159360219 4631.1497403479125 5976.963106208878 5034.7218927371305 5047.746751107715 3429.9563348467564 1.0569886412236542 1.284223184390127 1.4013544517894134 1.4251983696116626 1.4877971343402283 1.5779565775731752 1.3502066172964335 1.7425770251025419 1.4678676348111797 1.471665017955174 1.0 11.743974494908272 -10.621423808810363 0.9691978644917427 1.0074952857018071 1.4286944218049276 0.0 0.2120023597736908 0.3726969449875879 0.6404514965178324 0.10371732610757686 0.03022453311417168 2.3909813644262315e-11 10.621423808810363 0.42119913610312043 HSAIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 HSAISPK 7 0 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 HSAIS(1)PK;HSAIS(1)PK 73.233 0.0058911 352600000.0 7235.3 8867.2 9215.3 9983.3 11037.6 10233.0 11020.1 11636.3 9802.099999999999 9137.7 9019.5 True False 7969.82232965366 9614.470063441106 9840.705674100607 10599.945767280651 10262.357053652848 10149.66584074034 11439.475935930102 11404.204867999246 9390.151824720957 8560.744062550359 7910.158679321295 1.0075426616267935 1.2154585581924184 1.244059199447685 1.3400421150831003 1.2973642463684907 1.2831178554323512 1.4461752791173628 1.441716320787859 1.1871003105498572 1.0822468182502865 1.0 12.9494909203935 -9.675776651472583 1.124237090187325 1.036057781351428 1.2841134849237084 0.37157067346114536 0.11647645350509378 0.29675537153823855 0.7708143677686239 0.03499193320386949 0.023887983724646723 2.1097128519838715e-10 9.675776651472583 0.24805570357228035 HSAS(ph)PVVFTSAR ddPTM_A549_MK2206_60min_R1 2 HSASPVVFTSAR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 HS(0.014)AS(0.986)PVVFTSAR;HS(0.028)AS(0.972)PVVFTSAR 77.372 0.00033134 12054100.0 1815.48 1789.0 1808.55 1827.22 2119.9 2028.65 1774.47 1925.26 2619.8999999999996 2940.2 2379.54 True False 2121.8886397755036 1880.0524585631795 2065.029584962538 2274.888982027022 1808.0655182145504 2243.3203964911154 2096.8682298882795 2198.1715008614706 2026.4968331206044 2276.006777942416 1788.6345460369594 1.1863175987945265 1.05111044775959 1.154528514244557 1.271857902480664 1.0108635787118412 1.2542083576891625 1.1723290453794863 1.2289662557015426 1.132985403648091 1.2724828461942197 1.0 10.804642930587848 -10.145962531298155 0.8138955569742166 1.0075243742116342 1.1624655107690947 0.0 0.10877917362140756 0.43274558600092766 0.5644247738460121 0.035331814997179405 0.014377689074319614 7.145579718154505e-11 10.145962531298155 0.15494113655746045 HSAS(ph)PVVFTSAR ddPTM_A549_PD325901_60min_R1 2 HSASPVVFTSAR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 HS(0.114)AS(0.886)PVVFTSAR;HS(0.017)AS(0.983)PVVFTSAR 78.615 0.00029905 20491100.0 1539.04 1363.85 1750.45 1895.09 2091.8500000000004 1873.73 1661.38 2090.7 1968.6200000000001 1721.77 1994.48 True False 1695.282207818635 1478.786425931991 1869.2460633109515 2012.145405238337 1944.9256724907334 1858.4709641132008 1724.6047250420204 2048.9993483775793 1885.885747460459 1613.0571483608935 1749.1716040504166 0.9691914754921734 0.8454210110132613 1.068646471839863 1.150341910753052 1.1119124435744467 1.0624863562898508 0.9859551350184804 1.1714112804214725 1.0781593658926685 0.9221834750951058 1.0 10.772456117756978 -5.77391887962467 24.996844213023106 1.0590206184598092 0.9073062463542456 0.39447817499820637 0.07351297166387928 130.46275512937092 261322.8857694876 0.009048128883238684 0.028411248850449867 1.6829883913370907e-06 5.77391887962467 -0.1517143721055636 HSCS(ph)PMGDGDPEAMEESPR ddPTM_A549_PD325901_60min_R1 1 HSCSPMGDGDPEAMEESPR 19 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 HS(0.063)CS(0.937)PMGDGDPEAMEESPR 42.321999999999996 0.017252 1482000.0 215.8 315.38 264.53 282.23 411.89 166.59 394.21 370.74 170.15 361.3 332.63 True False 237.7078571364365 341.9581794262061 282.4825965481139 299.6627061091643 382.96026734335993 165.23334627273843 409.2118772699892 363.3452998600965 162.9991872125636 338.4874563401562 291.71861871529904 0.8148532246014301 1.1722192465196677 0.9683392777332497 1.0272320204615333 1.3127727980815225 0.5664134397742946 1.4027622887840319 1.2455334577554031 0.5587548300152951 1.1603217437091353 1.0 8.188433657844946 -8.754596553074078 24.999573508616905 0.7916342234260242 1.0660038627664394 0.01840492272412597 0.26545029282852506 194.2749033674134 709762.9386296258 0.043420063095522536 0.04870028557247482 1.7595574325682835e-09 8.754596553074078 0.27436963934041525 HSCSGS(ph)SPPR ddPTM_A549_MK2206_60min_R1 1 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HS(0.001)CS(0.021)GS(0.858)S(0.121)PPR 76.22800000000001 0.0014880000000000002 14227000.0 266.86 548.74 330.77 385.03 606.8 368.18 389.85 360.9 878.7 1100.8 560.68 True False 311.8994438994046 576.668522141956 377.6781597512141 479.36236728465326 517.5405238230994 407.14056322189595 460.680698699863 412.058680209896 679.675852995563 852.1285154611973 421.44768201921494 0.7400668154230927 1.3683039360403082 0.8961448261898252 1.1374184453642286 1.228006573303453 0.9660524439741333 1.0930910724023375 0.97772202289894 1.6127170275065714 2.0219081793937743 1.0 8.719209737724618 -8.666964232330564 21.666256453457457 1.2897470429790878 1.0636452519887947 0.2514022981626628 0.3015354511240162 8.812319265888165 2011.1752560795364 0.04275482742409764 0.048479383967370136 2.1529590410442504e-09 8.666964232330564 -0.22610179099029315 HSCSGS(ph)SPPR ddPTM_A549_PD325901_60min_R1 1 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSCS(0.014)GS(0.875)S(0.11)PPR 110.38 0.00018846 12127000.0 398.67 517.23 588.05 699.32 893.72 567.0 710.48 961.12 408.5 438.38 602.61 True False 439.142684914658 560.8187873188426 627.9586092319145 742.5154081290461 830.9481903666211 562.3825399882505 737.5177051895736 941.9497076159462 391.33216559701583 410.7006119856011 528.4927902595268 0.8309341073489542 1.061166391775073 1.1882065769024834 1.4049679046036168 1.5722980628715248 1.0641252829808359 1.395511384038751 1.7823321812079653 0.740468314439719 0.7771167735020915 1.0 9.045739980156997 -8.809027101071496 24.99998761563479 0.8774432534754486 1.2861657173528218 0.3777974000159262 0.25490307967051484 98.12145987685781 51547.19584587219 0.045865647134953606 0.048827534374080696 1.5522901401141212e-09 8.809027101071496 0.4087224638773732 HSCSGSS(ph)PPR ddPTM_A549_MK2206_60min_R1 3 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSCS(0.018)GS(0.361)S(0.621)PPR;HSCSGS(0.264)S(0.736)PPR;HSCS(0.001)GS(0.09)S(0.91)PPR 123.96 2.506e-05 35989700.0 6018.8 5559.6 4172.6 3824.11 5279.6 4215.5 4246.45 4701.2 7017.0 8234.8 8979.0 True False 7034.626294468021 5842.559893028429 4764.337422915974 4761.017121670823 4502.977833843828 4661.581411977572 5017.97499806088 5367.609496821178 5427.66070384644 6374.552960683012 6749.266492206839 1.0422801207495183 0.8656584978196734 0.7059044754592518 0.7054125255193607 0.6671803282687492 0.6906797082853597 0.7434844962567376 0.7952878291320967 0.8041852711125846 0.9444808510737431 1.0 12.720515003780003 -10.23461088126698 0.685104708661264 1.0000962035294314 0.7680256409854124 0.34517302354899393 0.10120327897014468 0.5770833522896587 0.5057116320048026 0.06951765551262164 0.022445387198049914 5.826250037460978e-11 10.23461088126698 -0.23207056254401903 HSCSGSS(ph)PPR ddPTM_A549_PD325901_60min_R1 3 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSCS(0.001)GS(0.03)S(0.969)PPR;HSCSGS(0.001)S(0.999)PPR;HSCSGS(0.207)S(0.792)PPR 128.81 1.4142e-06 51587000.0 3434.56 4241.3099999999995 3595.34 4903.57 6567.1 5505.43 4746.14 5997.4 4465.7 5419.1900000000005 4409.17 True False 3783.2340028105605 4598.7400785787395 3839.3413929357584 5206.452382084521 6105.849551265095 5460.595603399499 4926.756954887464 5877.7771521307195 4278.022158890073 5077.021418555249 3866.870042031494 0.9783711274721313 1.1892667787104505 0.9928808962296356 1.3464254876663155 1.5790159702541577 1.4121487259837486 1.2740942678019636 1.5200348313342276 1.1063268515335407 1.312953723132622 1.0 11.91695056372795 -8.965441306380457 14.107552271018031 1.0468809707832547 1.2905432113151702 0.05475489973693093 0.1961836238916128 1.777990003081263 725.1270848801878 0.03305022511805597 0.034823595966827145 1.0828260459884586e-09 8.965441306380457 0.24366224053191554 HSCSPMGDGDPEAMEES(ph)PR ddPTM_A549_MK2206_60min_R1 1 HSCSPMGDGDPEAMEESPR 19 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 HSCSPMGDGDPEAMEES(1)PR 44.848 0.0097234 2422100.0 188.03 113.55 320.31 197.91 300.88 0.0 124.34 287.17 282.31 201.48 355.46 True False 219.76486710786577 119.32920998873615 365.7347744653732 246.39795888451752 256.62095057332596 0.0 146.93096851697052 327.877226921241 218.36723575643276 155.9655280660628 267.1894718030784 0.822505713360723 0.44660895200497686 1.3688218027352657 0.9221843855663429 0.9604455925660815 0.0 0.5499130168768785 1.2271337815394543 0.8172748509992633 0.5837263235469514 1.0 8.06171935149113 -9.787507714889173 0.6544026415041716 0.9823857646435106 0.7732162963419859 0.0 0.3716221809850766 1.8943456394925864 1.7030889491392296 0.1791154666379792 0.08434571150294734 1.631143933021676e-10 9.787507714889173 -0.20916946830152472 HSCSPMGDGDPEAMEES(ph)PR ddPTM_A549_PD325901_60min_R1 2 HSCSPMGDGDPEAMEESPR 19 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 HSCSPMGDGDPEAMEES(1)PR;HSCS(0.001)PMGDGDPEAMEES(0.999)PR 59.678000000000004 0.00076424 8734100.0 867.37 932.31 900.78 978.0500000000001 1009.0799999999999 1027.37 1022.1400000000001 847.02 1101.8000000000002 1048.65 944.5799999999999 True False 955.4247638759538 1010.87903564223 961.9123476301747 1038.4619271872878 938.2057019370166 1019.0034393434372 1061.0380970364702 830.1255216256644 1055.4951776127107 982.438060036272 828.4026481859645 1.1533337875828165 1.2202749929105756 1.1611652253123161 1.2535714721111901 1.1325479270153211 1.2300823054765098 1.280824125031385 1.002079753660219 1.2741330317135433 1.185942684016781 1.0 9.694188355258127 -10.961377439945133 1.126530688061897 0.9958103027924338 1.1964201693262078 0.006316789199503958 0.09278664961070894 0.34996294250627763 0.7614658818823329 0.05689439404614278 0.01208532478104084 1.0930060353890966e-11 10.961377439945133 0.200609866533774 HSDENDGGQPHKR ddPTM_A549_MK2206_60min_R1 1 HSDENDGGQPHKR 13 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 0 46.481 0.0066293 8359100.0 170.41 527.14 232.07 106.13 403.2 402.88 511.29 410.71 569.04 632.96 762.47 False True 199.1710418755061 553.9691744030154 264.981015610437 132.13185476435672 343.8898141158103 445.51249418989977 604.1847747550419 468.9294002466232 440.15334857015495 489.9738963901884 573.1276558985353 0.3475160199052874 0.9665720519707189 0.46234205047216986 0.2305452431137766 0.6000230674205878 0.7773355370391896 1.0541888330407228 0.8181936352581822 0.7679848355600525 0.8549123242395614 1.0 9.162712704009602 -7.314184357471319 3.2484184814185975 0.8923646706455383 0.5226015305306942 0.4850271261167498 0.18653718376580272 0.17986151454772034 3.810365669829798 0.029094049734519345 0.04917668238995665 4.8508253951113005e-08 7.314184357471319 -0.369763140114844 HSDENDGGQPHKR ddPTM_A549_PD325901_60min_R1 2 HSDENDGGQPHKR 13 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 0 ; 85.522 5.3176999999999996e-05 15605700.0 1139.22 1179.81 1636.27 1189.81 1439.9099999999999 916.31 972.06 1289.05 1312.31 1449.74 1696.29 False True 1254.8727757505624 1279.2367292435556 1747.317121890835 1263.3018614454334 1338.7756890198293 908.8478751616124 1009.0522752316422 1263.3388865098382 1257.1581743809538 1358.2031689858243 1487.6570836682652 0.8435228719889512 0.85990027089389 1.174542938068967 0.849188885875758 0.8999222359219209 0.6109256529203457 0.6782828424031168 0.8492137740471056 0.8450591121987958 0.9129813475809672 1.0 10.538826297192944 -5.53971927054251 24.96209992799194 0.8922462571479376 0.8476166862726082 0.0 0.14227434854342383 1108.9763332884058 1643794.93805221 0.021152746687258032 0.08196482292512644 2.8858963537384704e-06 5.53971927054251 -0.04462957087532937 HSDS(ph)KEDDGQEIA ddPTM_A549_PD325901_60min_R1 2 HSDSKEDDGQEIA 13 1 H0YN29;H0YL10;A0A0C4DGH0;Q5ZPR3-2;Q5ZPR3 H0YN29 CD276 CD276 antigen 1 HS(0.003)DS(0.997)KEDDGQEIA;HS(0.015)DS(0.985)KEDDGQEIA 86.54799999999999 0.00017814 9583400.0 3056.3 3589.8 3529.3 3785.7999999999997 4850.2 3722.6 3833.7 4382.4 4193.0 4148.2 3675.8999999999996 True False 3366.573326070857 3892.3250444041946 3768.819521404977 4019.640267824378 4509.53868428164 3692.2843798240974 3979.5935513811332 4294.989594073709 4016.782791550275 3886.281944063759 3223.787603449984 1.0442912934053312 1.2073763917445322 1.1690657031411495 1.2468688270662436 1.3988324415217956 1.145324951269353 1.2344465705874395 1.3322805725406233 1.245982454691387 1.2055018574749765 1.0 11.654540980902839 -10.621143441838313 0.9010074399298119 0.9999931491543265 1.229008469672691 0.05380159459179257 0.10604092215378012 0.4030543666449006 0.5839518750889932 0.059538565271154156 0.01618425685573482 2.392525405760212e-11 10.621143441838313 0.2290153205183646 HSDS(ph)PRHGDGGR ddPTM_A549_MK2206_60min_R1 1 HSDSPRHGDGGR 12 1 Q86XP3-2;Q86XP3 Q86XP3-2 DDX42 ATP-dependent RNA helicase DDX42 1 HS(0.133)DS(0.867)PRHGDGGR 53.995 0.009079700000000001 2115500.0 0.0 0.0 0.0 0.0 178.16 133.74 0.0 0.0 237.63 321.64 217.84 True False 0.0 0.0 0.0 0.0 151.9529000071249 147.89227803057295 0.0 0.0 183.80718441713395 248.9813006113185 163.74431592185513 0.0 0.0 0.0 0.0 0.9279888535467848 0.9031903012813748 0.0 0.0 1.1225255874216333 1.5205492734791577 1.0 7.3553010168298165 -7.993779042730522 0.4166161497372607 1.1147815873897184 2.3893495047513687e-14 0.497285208756318 0.4013541502938765 0.737998455485699 0.29250728318415886 0.16491102677166986 0.296135333773153 1.0144273676355162e-08 7.993779042730522 -1.1147815873896945 HSEEAEFTPPLKCS(ph)PK ddPTM_A549_PD325901_60min_R1 1 HSEEAEFTPPLKCSPK 16 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HSEEAEFT(0.318)PPLKCS(0.682)PK 65.521 0.0011724 5575300.0 1154.4 1145.8 1345.2 940.8 1193.4 916.11 1027.9 1226.7 1178.6 882.9 806.65 True False 1271.5938381756366 1242.3605871854502 1436.4933613447351 998.9110792881752 1109.5797010064969 908.6495038953025 1067.0172969884632 1202.2325061724662 1129.0675406919047 827.1535433233438 707.4371637756545 1.7974654192451922 1.7561426665159379 2.0305596523626823 1.4120138585268813 1.5684498324693208 1.2844243282975973 1.5082856140801224 1.6994194929710016 1.5959969287815918 1.1692254601224967 1.0 9.46645819986036 -12.65781741813479 0.2016422902668532 4.635272745424776e-14 1.7703752669027535 0.5820901374082899 0.18424633972604804 9.475848230799324 0.2569446136399467 4.430012855624045 0.19296797561141255 2.1987840699291008e-13 12.65781741813479 1.770375266902707 HSEEGET(ph)PDRR ddPTM_A549_MK2206_60min_R1 2 HSEEGETPDRR 11 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 HSEEGET(1)PDRR;HSEEGET(1)PDRR 79.633 0.00058425 12671400.0 659.2 784.97 739.04 797.14 1209.48 832.9100000000001 884.54 797.6600000000001 979.16 1010.55 953.51 True False 770.4568441073509 824.9216201220453 843.8469848611945 992.439335784974 1031.5670941884678 921.0479833590887 1045.2494683287846 910.7307477312993 757.3818233972181 782.2660531425444 716.7271514627623 1.0749653372764407 1.1509562857197049 1.1773615428674558 1.3846822096240012 1.4392744743702695 1.2850747756371859 1.4583645480648304 1.2706798477950734 1.0567226619662504 1.0914419127920916 1.0 9.48528019831373 -8.782253926344724 4.243920967420907 1.0247268278494037 1.2885223722054966 0.44623061306891 0.1139544913646043 0.1268092509924659 5.104294575619202 0.02119282267453178 0.02294559512666065 1.6509961999284317e-09 8.782253926344724 0.26379554435609287 HSEEGET(ph)PDRR ddPTM_A549_PD325901_60min_R1 2 HSEEGETPDRR 11 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 HSEEGET(1)PDRR;HSEEGET(1)PDRR 107.65 8.3274e-05 17051000.0 1279.74 1480.0100000000002 1765.13 1854.0900000000001 2126.1400000000003 1780.16 1920.0299999999997 1802.52 1951.6599999999999 1813.26 1502.17 True False 1409.6582627052055 1604.7356367955476 1884.9223363889628 1968.612928356095 1976.8072611848115 1765.6629671701678 1993.0977923307291 1766.5673245504163 1869.6385172804696 1698.7704541471119 1317.4126130401987 1.0700203176680776 1.2180964573371529 1.4307759905525115 1.4943024750712828 1.5005224950920464 1.3402505408655074 1.512888044795054 1.3409370056611962 1.4191745993427958 1.2894748671237115 1.0 10.3634915524716 -10.701804542214157 0.8412263691177926 0.9868587221616417 1.3790836332192316 0.1589301170311006 0.1510725366040716 0.41967424460195984 0.4997241390877123 0.10645435232493523 0.024402249425181564 1.9869889768034057e-11 10.701804542214157 0.39222491105758983 HSENET(ph)SDREDGLPK ddPTM_A549_MK2206_60min_R1 1 HSENETSDREDGLPK 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 HS(0.01)ENET(0.495)S(0.495)DREDGLPK 46.356 0.012652 11128000.0 2491.1 3385.7 2976.0 3211.7 4586.7 3450.0 3225.8 3741.3 5249.8 4800.3 4518.7 True False 2911.536778452399 3558.0176685060705 3398.041549776622 3998.5666441786925 3912.002505964748 3815.076710075344 3811.88610456847 4271.6407322507175 4060.7286822079286 3715.9088960468594 3396.5820802244166 0.8571960605350748 1.0475288347134504 1.0004296877030303 1.177232450073605 1.1517467894390696 1.1232105157380083 1.1222711580450349 1.257629178791547 1.1955338002429876 1.0940141613775882 1.0 11.729868002767665 -4.964955635767846 1.0663876441121278 1.1173452548443468 0.5875973896034985 0.5650263949723757 0.07025522486642688 2.2878904358010628 1.3499189591339138 0.013507699822716756 1.5890958481719994 1.0840376454338061e-05 4.964955635767846 -0.5297478652408483 HSENETS(ph)DREDGLPK ddPTM_A549_MK2206_60min_R1 2 HSENETSDREDGLPK 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 HSENET(0.129)S(0.871)DREDGLPK;HSENET(0.118)S(0.882)DREDGLPK 78.021 0.00022286 19790500.0 2030.6499999999999 2243.68 2293.1 2223.3500000000004 2879.1000000000004 2409.5 2197.3 2213.5 3517.5 2886.3 2910.1 True False 2373.374075374076 2357.8737284678778 2618.2960610862815 2768.0708498099757 2455.5882039207086 2664.4716907033453 2596.5209676881095 2527.270403559447 2720.791866293266 2234.2828253775906 2187.441855325885 1.0849998456395498 1.077913784417644 1.1969671581035957 1.2654374529180747 1.1225844462754302 1.2180765784544212 1.1870125650957153 1.1553543228617311 1.2438236288058604 1.0214135840628902 1.0 11.095028953653742 -10.920326510141926 1.145506181142115 0.9988747375154805 1.178834941734846 0.5352295260343227 0.057790721708576576 0.3059799097328633 0.7059053240031404 0.04402010455978817 0.010138786150614486 1.2013608910059432e-11 10.920326510141926 0.17996020421936554 HSENETS(ph)DREDGLPK ddPTM_A549_PD325901_60min_R1 2 HSENETSDREDGLPK 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 HSENET(0.244)S(0.756)DREDGLPK;HSENET(0.217)S(0.783)DREDGLPK 71.376 0.0006416 31525000.0 4791.299999999999 4948.5 5375.799999999999 4987.9 6372.6 6022.4 5137.6 6299.799999999999 6214.3 5271.2 5626.2 True False 5277.709248831361 5365.527461762262 5740.6341153115 5295.991254657196 5925.010560276523 5973.355571120357 5333.114179402591 6174.145546902509 5953.134581810367 4938.375532411379 4934.2130674203045 1.0696151902476807 1.087413005569185 1.1634345815376002 1.0733203415202408 1.2008015218066426 1.2105994389584265 1.0808439170606872 1.2512928530932823 1.206501320568788 1.00084359247041 1.0 12.268604299585434 -2.0003199389107116 3.9595014068493217 1.1205395879289524 0.00016143797541690041 0.0 0.08379171305595567 0.0 0.0 0.012220472524399175 0.0 0.009992635847204535 2.0003199389107116 -1.1203781499535355 HSGNITFDEIVNIAR ddPTM_A549_MK2206_60min_R1 1 HSGNITFDEIVNIAR 15 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 63.128 0.004938199999999999 1008700.0 0.0 145.79 169.58 138.49 252.93 0.0 127.93 109.39 150.44 198.63 256.76 False True 0.0 153.2100882805623 193.6289939553494 172.42005621705238 215.72433205434498 0.0 151.1732250472579 124.89636749282495 116.36558020331451 153.7593450454738 192.99940578450025 0.0 0.7938370983982924 1.0032621249184162 0.893370917470977 1.1177460944891147 0.0 0.7832833703957371 0.6471334302048682 0.6029323237049045 0.7966829971339848 1.0 7.5924525954386795 -10.774550194042828 0.9576903076900959 1.0055568064131495 0.6664940860257369 0.05891705758034449 0.3474202926555296 1.047023072801893 1.6596247795265002 0.24877117464156348 0.05889654055647332 1.6805436838752462e-11 10.774550194042828 -0.3390627203874126 HSGNITFDEIVNIAR ddPTM_A549_PD325901_60min_R1 2 HSGNITFDEIVNIAR 15 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 ; 96.414 1.845e-05 4211500.0 852.63 821.6800000000001 671.1 757.11 1043.81 648.05 624.64 794.8499999999999 992.81 845.6800000000001 860.0 False True 939.1883699269682 890.9258572862105 716.6448816521348 803.8749651784334 970.4963865490128 642.7724956602924 648.4110170161233 778.9960932022373 951.0856482897761 792.2836204753482 754.2254519891687 1.2452355823447545 1.181246078260171 0.9501732933595384 1.0658284774908096 1.2867457389424586 0.8522285928763952 0.8597045025542773 1.032842489136026 1.261009749513776 1.0504599365956242 1.0 9.558852026065734 -5.535871910951486 24.3633652332709 1.0817663431770554 1.229238284374322 0.14707455541579306 0.13619164992656627 244.1653640696878 457833.2920006863 0.02130400106115633 0.08262419348855793 2.9115757197475327e-06 5.535871910951486 0.14747194119726648 HSGS(ph)LTR ddPTM_A549_PD325901_60min_R1 1 HSGSLTR 7 0 H0Y8F0;H0Y547;E9PEJ6;P98196 H0Y8F0 ATP11A Phospholipid-transporting ATPase;Probable phospholipid-transporting ATPase IH 1 HS(0.091)GS(0.791)LT(0.118)R 68.37100000000001 0.02282 37468000.0 5473.3 6218.7 5184.6 6158.8 6367.0 5873.7 4871.6 6094.5 5753.3 6188.9 7604.7 True False 6028.945386769497 6742.771673529546 5536.458133532496 6539.215088350357 5919.803884957572 5825.86653461903 5056.991403841811 5972.940416457243 5511.508808639683 5798.13179779572 6669.370110165153 0.9039752311212195 1.011005771482455 0.8301320877505473 0.9804846605204262 0.8876106419607565 0.8735257510659825 0.7582412312272448 0.8955778908346317 0.8263912060059899 0.8693672268927569 1.0 12.70333479691862 -4.875267300054946 15.379421855483544 0.9049290759480506 0.825548968177699 0.0 0.07502586786471745 42755276.82557849 36052270.58459171 0.011550650492472244 117942060.4390185 1.3327009274247011e-05 4.875267300054946 -0.07938010777035165 HSGS(ph)RSDEDRYQNGAER ddPTM_A549_MK2206_60min_R1 2 HSGSRSDEDRYQNGAER 17 2 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 HS(0.022)GS(0.489)RS(0.489)DEDRYQNGAER;HS(0.069)GS(0.533)RS(0.398)DEDRYQNGAER 94.837 6.796699999999999e-07 53024500.0 1044.44 1105.37 1008.8800000000001 862.04 1412.45 1191.46 1188.6000000000001 1223.25 1491.7 1948.85 1427.31 True False 1220.71593789363 1161.6286115829964 1151.9543544148657 1073.2398386984462 1204.6804760612015 1317.5395063728606 1404.5532345123952 1396.6494335460118 1153.8323317554127 1508.6034314648916 1072.8695352479942 1.1378046423990045 1.082730540311675 1.0737133608221907 1.0003451523584985 1.1228583126677552 1.228051932771407 1.3091556693216497 1.3017886962585583 1.075463785527943 1.4061387539689785 1.0 10.067258934573458 -8.97748435628738 11.43398105970048 1.0332189305981605 1.155110103775308 0.0 0.14393668771038445 0.5007015645211351 249.37169106366835 0.018212638845013885 0.018828081080054616 1.053211624160746e-09 8.97748435628738 0.12189117317714748 HSGS(ph)RSDEDRYQNGAER ddPTM_A549_PD325901_60min_R1 2 HSGSRSDEDRYQNGAER 17 2 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 HS(0.125)GS(0.438)RS(0.438)DEDRYQNGAER;HS(0.225)GS(0.388)RS(0.388)DEDRYQNGAER 110.75 1.3647e-09 15508800.0 992.0799999999999 851.54 789.33 822.72 1191.77 1083.49 728.13 878.78 1066.92 872.76 1216.27 True False 1092.7952312693046 923.3022642798894 842.8986804268809 873.5375458673122 1108.064186583302 1074.6664166699647 755.8393855980244 861.2520435104259 1022.0810627142425 817.653784653847 1066.6765005707748 1.0244860842856796 0.8655878926608336 0.7902102277268214 0.8189338992655087 1.03880059792297 1.0074904772861448 0.7085928912782623 0.8074163469895259 0.9581921624478749 0.7665433561312388 1.0 10.058906989609154 -8.937461555994187 7.457340961153582 0.981745072344827 0.8803480503384287 0.0 0.11895132082735074 0.3066328200568321 30.551371240675802 0.017989451812095495 0.01902247989554373 1.154884211202002e-09 8.937461555994187 -0.10139702200639833 HSGSRS(ph)DEDRYQNGAER ddPTM_A549_PD325901_60min_R1 1 HSGSRSDEDRYQNGAER 17 2 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 HS(0.098)GS(0.433)RS(0.469)DEDRYQNGAER 107.56 1.89e-09 58038000.0 439.06 650.09 504.97 867.32 721.97 921.1 834.58 913.84 1003.8 780.81 816.82 True False 483.63304798111153 704.8753657910536 539.2403008312896 920.8923865733633 671.2613178612877 913.5988669897321 866.340398599699 895.6127443063883 961.6137768085297 731.5095233461315 716.3563182485963 0.6751291719790163 0.9839731259918078 0.752754302704646 1.2855228091305633 0.9370494832828998 1.2753413960574393 1.2093707789411219 1.2502336079006773 1.3423679701179407 1.0211531673714875 1.0 9.484533557573922 -6.065984533364719 1.1028520948475324 1.179043717585699 0.7400379395668643 0.491172123526492 0.15261402178019498 0.45608778890569984 0.8792317104065814 0.024764494709515472 0.16569544702565273 8.590441143081477e-07 6.065984533364719 -0.43900577801883467 HSHSHS(ph)PMSTR ddPTM_A549_MK2206_60min_R1 2 HSHSHSPMSTR 11 0 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 HSHS(0.007)HS(0.989)PMS(0.003)T(0.001)R;HSHS(0.012)HS(0.988)PMSTR 84.859 0.00031439 25613000.0 1220.05 391.69 455.9 0.0 879.73 2028.77 1776.03 273.51 2803.3 1839.72 1050.48 True False 1425.9646126413434 411.6253479567425 520.5534753169229 0.0 750.3228823712842 2243.4530948114643 2098.7116616953135 312.28088008924544 2168.3570259502226 1424.1259742589698 789.6168242269111 1.8058944147212925 0.5212975905873736 0.659248206655906 0.0 0.9502366962683472 2.8411921149324018 2.657886201639758 0.3954840759567019 2.7460876711602396 1.8035658949558053 1.0 9.625008919146223 -7.024317047851721 22.551243348826326 1.8591614819917033 0.693131390519693 0.32811020847230377 0.798972742454369 219.5230076472083 203582.6579461046 0.1315985700226826 0.22897131895852782 9.455466322593411e-08 7.024317047851721 -1.1660300914720103 HSHSHS(ph)PMSTR ddPTM_A549_PD325901_60min_R1 3 HSHSHSPMSTR 11 0 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 HS(0.003)HS(0.025)HS(0.968)PMS(0.002)T(0.002)R;HSHS(0.068)HS(0.932)PMSTR;HSHS(0.005)HS(0.995)PMSTR 93.348 0.00019004 28223400.0 1573.74 808.5529999999999 607.77 1107.28 1958.0 3147.01 1753.31 659.15 3192.5699999999997 1760.21 922.76 True False 1733.5049262738448 876.6925989270004 649.0169270179076 1175.6741707846627 1820.4768347333 3121.38179394784 1820.033171498045 646.0027361568286 3058.3973853612347 1649.0700402006814 809.2663698575877 2.1420696458434345 1.0833177203215278 0.8019818334130451 1.452765386743495 2.2495397097171628 3.8570511641267524 2.248991480788123 0.7982572367000871 3.7792221440011677 2.037734547761919 1.0 9.660470833370743 -6.741815245667727 4.884943886206293 2.3363739183904397 1.2945748197151439 0.1783530547376052 0.9369170095649404 0.2957545235671211 17.96002119752809 0.16962839753249687 0.34899428590764253 1.8121108233936642e-07 6.741815245667727 -1.0417990986752959 HSLDS(ph)DEEEDDDDGGSSK ddPTM_A549_MK2206_60min_R1 4 HSLDSDEEEDDDDGGSSK 18 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HSLDS(1)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK 210.98 2.0449999999999996e-55 1036395000.0 6569.33 8381.89 8583.1 8052.200000000001 11481.2 8894.199999999999 8362.58 10184.7 11680.300000000001 11715.0 9891.0 True False 7678.072299301788 8808.492399053173 9800.312643107434 10024.989361476997 9792.330689053668 9835.378340507858 9881.952539011158 11628.412414335624 9034.730699606316 9068.573363579142 7434.791722287319 1.0327219088444919 1.1847665312059654 1.3181690905649688 1.3483887290917682 1.317095495721708 1.3228855236151789 1.3291498818168597 1.5640535537097917 1.2151962068450217 1.2197481385247453 1.0 12.86007661195229 -9.853356627679302 1.0587105362100784 1.033415307364609 1.2996326832034344 0.1693128961583208 0.1357925707160188 0.31474376230598894 0.7194030787180727 0.041658330090954473 0.02503282950263185 1.4016622350735292e-10 9.853356627679302 0.2662173758388253 HSLDS(ph)DEEEDDDDGGSSK ddPTM_A549_PD325901_60min_R1 4 HSLDSDEEEDDDDGGSSK 18 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HSLDS(1)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK 335.54 1.1427999999999994e-195 1198737000.0 11797.2 14668.800000000001 16425.2 16757.0 21296.5 14904.0 15910.5 12092.8 15456.6 14181.9 12841.900000000001 True False 12994.843059360368 15904.991256158073 17539.91284475138 17792.04183209178 19800.70730893652 14782.626765405457 16515.982784059674 11851.59961738192 14807.012853774391 13286.452413701805 11262.427711511287 1.1538225498289667 1.4122169450110333 1.5573829456702215 1.579769680910502 1.7581207015160938 1.3125613006417955 1.4664673733868894 1.0523130466150243 1.3147265610095944 1.1797147785571818 1.0 13.459230225603457 -9.455031291969217 0.41912436272614884 0.9974472393044788 1.4857360390267431 0.36450328645097607 0.179978344448994 0.7251419507294927 0.2984697753421408 0.1386672202011313 0.07026782773781906 3.50726602341033e-10 9.455031291969217 0.48828879972226436 HSLDS(ph)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR ddPTM_A549_MK2206_60min_R1 1 HSLDSDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 42 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HS(0.009)LDS(0.991)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 144.35 1.0321e-40 30190000.0 845.96 875.56 718.51 931.78 1764.0 1069.8 853.38 970.95 1526.7 1358.3 1453.3 True False 988.7373662637358 920.1222641808705 820.4055221538983 1160.0661418291934 1504.517936756671 1183.0055259242329 1008.4280996703576 1108.5851359096664 1180.904887638928 1051.4590866196802 1092.4055009604858 0.905101050291672 0.8422900318351224 0.751008230398479 1.0619372941725556 1.3772522524226027 1.0829362584535578 0.9231261640331434 1.0148110156301435 1.0810133110833202 0.9625172023531519 1.0 10.093292768788608 -6.274503841218186 24.358146917919598 1.0577956186026363 0.8337488005864941 0.4385949622036216 0.11585757832751187 385.022123960248 717857.8592196178 0.016594806862123834 0.038796025433160373 5.314912985879039e-07 6.274503841218186 -0.22404681801614212 HSLDS(ph)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR ddPTM_A549_PD325901_60min_R1 2 HSLDSDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 42 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HS(0.187)LDS(0.812)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR;HS(0.037)LDS(0.963)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 192.38 2.6105999999999998e-82 409790000.0 6102.700000000001 7541.9 5928.2 5791.2 5587.9 5544.9 5000.5 4205.9 5909.799999999999 8463.7 7536.3 True False 6722.241611429712 8177.482381300353 6330.5233011625505 6148.909271230527 5195.425181208485 5499.744172805735 5190.796763878598 4122.01002503528 5661.431657883096 7929.300537575921 6609.382876541835 1.0170755329197887 1.2372535430386475 0.9578085306013941 0.9303303176843287 0.7860681213745689 0.8321116018751987 0.7853678415729078 0.6236603480281354 0.8565749274378962 1.1997036161604084 1.0 12.690299857073358 -5.945688462762753 4.859193609798198 0.8823497206368449 1.126473901389685 0.30351130596891773 0.1447361335711232 0.15794499753813018 7.868669680940939 0.017556361821598025 0.056757735860451665 1.1332129718666034e-06 5.945688462762753 0.24412418075284004 HSLEEDEGS(ph)DFITENR ddPTM_A549_MK2206_60min_R1 2 HSLEEDEGSDFITENR 16 0 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 HSLEEDEGS(0.998)DFIT(0.002)ENR;HSLEEDEGS(1)DFITENR 105.38 2.7405e-07 2031400.0 320.20000000000005 388.49 236.07 281.63 152.28 330.73 0.0 480.34000000000003 445.64000000000004 420.34 457.12 True False 374.2419318616106 408.2624816250473 269.5482757579863 350.6293626428513 129.8798137240962 365.7276290791937 0.0 548.4296659795551 344.7032515408475 325.3849020611915 343.6044881298129 1.089164853167526 1.1881756371901835 0.7844725114770666 1.0204446529533817 0.3779921922178966 1.0643854830587158 0.0 1.5961073994247705 1.0031977562837289 0.9469751219846171 1.0 8.424605070722393 HSLEEDEGS(ph)DFITENR ddPTM_A549_PD325901_60min_R1 2 HSLEEDEGSDFITENR 16 0 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 HSLEEDEGS(1)DFITENR;HSLEEDEGS(1)DFITENR 95.814 1.6809e-06 3959500.0 345.18 330.26 101.25 448.05 294.09 333.08 565.3499999999999 201.77 305.64 202.11 513.48 True False 380.22241949191476 358.09216924757095 108.121433865711 475.7250309046203 273.43413295542183 330.3675069123219 586.8647036213906 197.74553906449705 292.7950136917304 189.34874010769164 450.32521521790505 0.8443285133565779 0.7951856950188676 0.24009633529713142 1.0564032721872452 0.6071925881900961 0.7336198279558085 1.3032019611369448 0.43911718105505415 0.650185696463947 0.4204711033470974 1.0 8.814823451046195 HSLS(ph)LDDIR ddPTM_A549_MK2206_60min_R1 4 HSLSLDDIR 9 0 Q96NE9-3;Q96NE9-2;Q96NE9 Q96NE9-3 FRMD6 FERM domain-containing protein 6 1 HSLS(1)LDDIR;HS(0.011)LS(0.989)LDDIR;HSLS(1)LDDIR;HSLS(1)LDDIR 141.27 3.9785e-05 19011500.0 2949.77 3533.9100000000003 3894.07 3715.0979999999995 5188.22 3987.23 4416.87 4130.867 5916.94 5922.57 4242.4 True False 3447.6190610475437 3713.7709244499774 4446.307680691752 4625.297176777088 4425.039710793473 4409.156032090932 5219.35810610867 4716.430047499621 4576.7625374115905 4584.657323596497 3188.894995716482 1.0811328267875222 1.164594923770943 1.39430984295949 1.450438845741258 1.3876404575056427 1.3826595225034313 1.6367293727512602 1.4790170431560201 1.4352189531356088 1.4376946653166343 1.0 11.638840877814129 -10.678128262463508 0.9605915296663536 1.0018898381793848 1.386165746260339 0.0 0.18972798060160626 0.3921963391722685 0.6486316678209286 0.10165135646498409 0.02740007455252576 2.0983200842454736e-11 10.678128262463508 0.38427590808095413 HSLS(ph)LDDIR ddPTM_A549_PD325901_60min_R1 2 HSLSLDDIR 9 0 Q96NE9-3;Q96NE9-2;Q96NE9 Q96NE9-3 FRMD6 FERM domain-containing protein 6 1 HS(0.001)LS(0.999)LDDIR;HS(0.003)LS(0.997)LDDIR 96.64 0.00027223 11678800.0 367.53 308.47 391.23 374.29999999999995 470.78 290.86 625.36 587.11 316.23 349.49 524.3 True False 404.8413750387142 334.46584947555914 417.7812204571072 397.4196609030229 437.714036902831 288.49133259432574 649.1584170101228 575.3996304711153 302.9399528194475 327.42314175566344 459.81442381153624 0.8804451406349232 0.7273931224320322 0.9085865923778478 0.8643044678953198 0.9519362904592931 0.6274081839428539 1.4117835008938144 1.2513735991608517 0.6588309046686479 0.712076709211419 1.0 8.844907912105267 -5.793924506767278 23.58781143258501 0.9001990356049084 0.8039189330596251 0.029787893523904763 0.2293892895501354 345.8289972403551 251110.38765985242 0.033419218649475384 0.10392124869180756 1.6072206112353766e-06 5.793924506767278 -0.0962801025452833 HSLS(ph)STK ddPTM_A549_MK2206_60min_R1 2 HSLSSTK 7 0 P42858;A0A3B3IU44 P42858 HTT Huntingtin 1 HS(0.014)LS(0.958)S(0.023)T(0.004)K;HS(0.001)LS(0.974)S(0.022)T(0.003)K 65.305 0.007723399999999999 13431200.0 1734.8400000000001 1923.5300000000002 1749.94 1443.88 2022.64 1851.1999999999998 1474.38 1724.13 2910.2 2588.26 2420.5 True False 2027.6385792342182 2021.42946093909 1998.1078056505735 1797.6306648182358 1725.1123353750068 2047.0927552728922 1742.255761316158 1968.530707426677 2251.044346634446 2003.5702683753625 1819.423047598469 1.11444041665328 1.1110277313499228 1.0982095715935651 0.9880223663160704 0.9481644951414973 1.1251329139613426 0.9575869469257481 1.0819532653634465 1.2372297633613532 1.1012118764901637 1.0 10.829265318421601 -8.522046902246075 24.999985767088955 1.1145286546404516 1.0477803763414906 0.11528187638935283 0.07801469404401483 62.12571330716144 1867141.5510090217 0.01708849891999538 0.01949802564627252 3.0057516747010673e-09 8.522046902246075 -0.06674827829896102 HSLS(ph)STK ddPTM_A549_PD325901_60min_R1 2 HSLSSTK 7 0 P42858;A0A3B3IU44 P42858 HTT Huntingtin 1 HS(0.002)LS(0.964)S(0.028)T(0.006)K;HS(0.003)LS(0.779)S(0.184)T(0.034)K 54.416000000000004 0.013069999999999998 18739400.0 3466.7 4155.6 4184.8 3859.7 4831.1 3917.0 4252.9 3454.1 4445.7 5252.200000000001 4578.1 True False 3818.6368319503445 4505.806996079469 4468.805693246692 4098.1049029853 4491.780202390219 3885.101250677212 4414.746436776177 3385.2052658109683 4258.862689338195 4920.575195653943 4015.0227229669918 0.9510872280016579 1.1222369851869236 1.113021270759924 1.020692829343918 1.1187434075269482 0.967641161394531 1.0995570240543495 0.8431347714289882 1.0607319019582067 1.2255410579638695 1.0 11.971192437340923 -7.262691042731124 24.996030892388745 1.0159763528809713 1.0685164567244014 0.01012127613733016 0.09947039148642949 208.14764230238703 4156752.022763722 0.010809936374537874 0.017921004977399194 5.461462515870722e-08 7.262691042731124 0.05254010384343011 HSLSGS(ph)SPGMK ddPTM_A549_MK2206_60min_R1 1 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HS(0.003)LS(0.017)GS(0.841)S(0.139)PGMK 63.091 0.0016874000000000001 5156700.0 1187.8 1603.8 1205.2 1555.7 2093.0 1578.2 1274.1 1437.4 2331.9 2356.0 2297.8 True False 1388.271601078142 1685.4265696163363 1376.115482456581 1936.8465698380276 1785.1224725803338 1745.2040764756264 1505.5874777824697 1641.1558518528811 1803.7283732791088 1823.7779636869361 1727.1928439461944 0.8037733632026266 0.9758184070318212 0.7967352848177096 1.1213840866853222 1.0335397572061409 1.0104280379533537 0.8716962226074229 0.9501868060680817 1.0443120926543734 1.055920287117488 1.0 10.75421345581652 -6.252220809949036 24.99969349260938 1.011163808122724 0.8704799602032872 0.4549268749612624 0.07387333719641614 481.40463501316657 1305510.429891758 0.009926947267180615 0.025877466002010185 5.594730742060983e-07 6.252220809949036 -0.1406838479194369 HSLSGSS(ph)PGMK ddPTM_A549_MK2206_60min_R1 1 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSLS(0.004)GS(0.131)S(0.865)PGMK 68.515 0.00098903 7653000.0 1464.3 1620.2 1446.3 1737.6 2119.3 1427.9 1390.9 1423.5 2130.4 2513.2 2001.0 True False 1711.4380413021745 1702.6612595662732 1651.4070878501118 2163.3120780038294 1807.5537774197337 1578.9994302366904 1643.6085258987803 1625.2854842859167 1647.8678015497296 1945.4663745067944 1504.0964752094753 1.137851241266836 1.1320159894192583 1.0979396036548257 1.4382801327305452 1.2017538816238473 1.0497993022799839 1.0927547221795564 1.0805726301961869 1.0955865057261245 1.293445205525031 1.0 10.554681391466486 -7.258261569302485 12.578584008552347 1.0533986616267632 1.2051078076675297 0.0834508281728934 0.11293009520509104 0.26688031360927755 1021.9992994365455 0.013501269555944639 0.022617366415000426 5.517450311142346e-08 7.258261569302485 0.15170914604076646 HSLSGSS(ph)PGMK ddPTM_A549_PD325901_60min_R1 2 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HS(0.003)LS(0.237)GS(0.166)S(0.593)PGMK;HS(0.001)LS(0.009)GS(0.23)S(0.76)PGMK 58.781000000000006 0.0026146999999999998 14596000.0 2551.7 2855.1 2727.3 3496.7 4386.0 3257.7 2871.3 3422.1 3703.7 3097.4 3116.2 True False 2810.746705537742 3095.7092969743203 2912.390978587198 3712.683217418117 4077.942490878576 3231.170371286994 2980.5688927356487 3353.843530914484 3548.0463689636895 2901.8296353944106 2732.9271552193577 1.0284747985945268 1.1327448999370948 1.065667254622978 1.3585006136470255 1.4921519159742334 1.1823111952018512 1.0906141010905994 1.22719828975657 1.29825866825159 1.0618027743083025 1.0 11.41623129073456 -10.922926793412865 1.14627423654624 0.9985091672301191 1.218386705470701 0.20865911176270224 0.13084519185823384 0.5697430958880032 1.3151521994716482 0.10029938564197156 0.023026368290784086 1.1941893853121438e-11 10.922926793412865 0.21987753824058187 HSNS(ph)LGPIFDHEDLLK ddPTM_A549_PD325901_60min_R1 1 HSNSLGPIFDHEDLLK 16 0 E9PC85;Q5S007 E9PC85 LRRK2 Leucine-rich repeat serine/threonine-protein kinase 2 1 HS(0.019)NS(0.981)LGPIFDHEDLLK 102.33 1.3779e-06 2494700.0 301.94 311.85 358.59 342.53 495.71 581.52 466.35 366.43 369.54 353.87 364.54 True False 332.5927265235202 338.13069393767034 382.9260737768425 363.6873001579281 460.89303970666214 576.7842939223417 484.09720444651174 359.1212661912258 354.0095189099663 331.52658780816785 319.70389100945556 1.0403149160098382 1.0576370930927137 1.1977523093878049 1.137575457744966 1.441624742981407 1.8041203443009792 1.5142049191768958 1.12329338581808 1.1073043802882465 1.0369801467269681 1.0 8.3205924925603 -8.468394420347863 7.720999971476665 1.0538821735062511 1.3166968721150685 0.24528363317588997 0.21062753089312997 0.3519197889871879 45.155463377594515 0.03870006793593118 0.04664622398287921 3.400991759504014e-09 8.468394420347863 0.26281469860881734 HSPAPPPDPGFPAPS(ph)PPPADSPSEGFSLK ddPTM_A549_MK2206_60min_R1 2 HSPAPPPDPGFPAPSPPPADSPSEGFSLK 29 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 HSPAPPPDPGFPAPS(0.996)PPPADS(0.003)PS(0.001)EGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK 89.565 9.171900000000001e-10 11301000.0 1040.74 1763.71 1456.67 1138.42 2627.8 2007.54 1456.06 1688.8899999999999 2517.8999999999996 2310.3 2183.9 True False 1216.391468349945 1853.475305585503 1663.2477097826315 1417.3329511056163 2241.254101025611 2219.9765503028 1720.6072544540787 1928.295329508705 1947.5996702600746 1788.4016254269648 1641.5773574262737 0.7409894287632286 1.129081914538253 1.0132009327847538 0.8633969911279502 1.3653051992259035 1.3523435494891098 1.0481426578347248 1.17466004315018 1.18641967218261 1.0894409680643302 1.0 10.680867021503005 -5.259512311185357 23.89807848902822 1.1095468373606072 0.7409892038000819 0.37134467481006594 0.14172344416718152 81.94779646003803 1016100.4294918046 0.020234734665801897 0.18077900060777655 5.501583246480141e-06 5.259512311185357 -0.3685576335605253 HSPAPPPDPGFPAPS(ph)PPPADSPSEGFSLK ddPTM_A549_PD325901_60min_R1 2 HSPAPPPDPGFPAPSPPPADSPSEGFSLK 29 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK 110.59 1.8147e-15 12955900.0 4579.4 5063.4 5261.0 5087.1 5635.6 5473.799999999999 6552.4 6150.4 5344.7 6726.4 6823.1 True False 5044.2973168239 5490.1104880038465 5618.043096963021 5401.318613357654 5239.77489776455 5429.223187632602 6801.755167610862 6027.725447104539 5120.080845694911 6301.693956065394 5983.901955194531 0.8429779355667792 0.9174800204134307 0.9388594831648412 0.9026415629468751 0.8756451788478893 0.9073048369249398 1.1366755703118374 1.0073235644965681 0.8556425028405168 1.0531078221619243 1.0 12.546870821867344 -7.552334343108735 24.999980344806662 0.9540188113478532 0.8987369616530333 0.23001792303260704 0.07593918169477057 405.0337188050016 343764.4290333499 0.01289248132939133 0.01912279446073199 2.803274696304988e-08 7.552334343108735 -0.05528184969481986 HSPASS(ph)S(ph)SKTEK ddPTM_A549_PD325901_60min_R1 1 HSPASSSSKTEK 12 1 A0A5F9ZI40;A0A5F9ZHN5;A0A5F9ZGY4;A0A5F9ZHF7;Q01484;A0A5F9ZH30;A0A5F9ZHT4;A0A5F9ZI65;A0A5F9ZI46;A0A5F9ZHT8;A0A5F9ZH19;A0A5F9ZI30;A0A5F9ZGZ5;I6L894;A0A5F9ZHD2;A0A5F9ZHR8;D6RHE1;A0A5F9ZGY3;A0A5F9ZHE4;A0A5F9ZHS1;A0A5F9ZGX3 A0A5F9ZI40 ANK2 Ankyrin-2 2 HS(0.008)PAS(0.034)S(0.483)S(0.522)S(0.518)KT(0.435)EK 41.967 0.025787 148680000.0 7183.3 7508.3 4116.6 2923.5 3107.9 2054.3 1687.3 1916.0 1923.0 6431.3 6684.9 True False 7912.543327934033 8141.050791381139 4395.977231126773 3104.077955249769 2889.611825672942 2037.5704619009946 1751.5111248259889 1877.783876927077 1842.1829974126358 6025.226620427476 5862.699679072552 1.3496415919407552 1.3886180833108972 0.7498213232410011 0.5294622145374531 0.4928807518467436 0.34754815587335824 0.29875504813561743 0.3202933767236961 0.3142209388600406 1.0277222014177323 1.0 12.517349440217924 -5.834775806769226 3.6121712065678153 0.5743924319157542 1.3837809123681768 0.6216428681130084 0.24499437977613917 0.13380346963712167 3.4046236876425118 0.041727822803542314 0.15518062288962264 1.4629321802527416e-06 5.834775806769226 0.8093884804524226 HSPEEDFRQS(ph)PQEHFR ddPTM_A549_MK2206_60min_R1 4 HSPEEDFRQSPQEHFR 16 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 HSPEEDFRQS(1)PQEHFR;HSPEEDFRQS(1)PQEHFR;HSPEEDFRQS(1)PQEHFR;HSPEEDFRQS(1)PQEHFR 174.78 1.2713999999999999e-27 112247200.0 3271.01 3680.95 3072.92 2921.75 4652.139999999999 3538.33 3341.21 3823.31 5394.4 4664.530000000001 4312.51 True False 3823.076519483595 3868.2946323913575 3508.7062631517397 3637.578881162344 3967.8163686525927 3912.753732046634 3948.264607677233 4365.275900895811 4172.577013086678 3610.809433343223 3241.594747778917 1.1793813900096854 1.1933307317461086 1.082401267325548 1.1221571985994696 1.2240322055590909 1.2070459253821235 1.218000680184503 1.3466445501513786 1.2871988443174933 1.1138990880390849 1.0 11.662488026376927 -10.900995222663635 1.190614416237097 1.0016422175893065 1.2114876722975312 0.3443269932346942 0.07453091181880107 0.3103747659927025 0.7911929437636296 0.05224800214117483 0.012878115558085582 1.256043780381189e-11 10.900995222663635 0.2098454547082247 HSPEEDFRQS(ph)PQEHFR ddPTM_A549_PD325901_60min_R1 3 HSPEEDFRQSPQEHFR 16 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 HSPEEDFRQS(1)PQEHFR;HSPEEDFRQS(1)PQEHFR;HSPEEDFRQS(1)PQEHFR 184.15 1.988e-34 122368000.0 5033.77 6215.98 6184.539999999999 6169.3 6752.57 7121.49 6849.1 6702.2 7166.8 7657.6 6292.110000000001 True False 5544.7946247343825 6739.822449583709 6604.260075060191 6550.36364950313 6278.29277830186 7063.49494656248 7109.746248471328 6568.519363225812 6865.604319218342 7174.097829145806 5518.220358971592 1.0048157311658614 1.2213760979345492 1.1968097766017811 1.1870427825256138 1.1377386856424705 1.2800313302238033 1.2884128914700212 1.1903329218353216 1.244170017251333 1.3000745462225096 1.0 12.429987353612766 -10.794252739118352 0.9922395619484957 0.9975849803076754 1.2008894487955954 0.0 0.11429791622176519 0.3622280678000354 0.6208286202113232 0.05273840551080637 0.012593389990160915 1.6060063602638194e-11 10.794252739118352 0.20330446848792005 HSPIAPSS(ph)PSPQVLAQK ddPTM_A549_MK2206_60min_R1 2 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 HSPIAPS(0.177)S(0.774)PS(0.049)PQVLAQK;HSPIAPS(0.009)S(0.983)PS(0.008)PQVLAQK 108.71 2.3975e-09 14817500.0 3431.3 4807.200000000001 3791.3 3447.6 5187.200000000001 4153.3 4283.0 4162.1 5547.5 5345.299999999999 6189.6 True False 4010.419552769345 5051.865946788663 4328.963349350846 4292.262154768643 4424.1697514422885 4592.799449262588 5061.165659950015 4752.09042089667 4291.000107537138 4137.793017527919 4652.551495730421 0.8619828402650994 1.0858269814798798 0.9304493143866269 0.9225609128039935 0.9509125810863748 0.987157144521094 1.0878258230122917 1.0213944811266666 0.922289653639498 0.8893599611578961 1.0 12.183806403183754 -5.180206456605637 21.43371466995431 0.975935860807054 0.8619673736941994 0.22361269384602378 0.0627290615506588 54222.288128184904 14300425.913035095 0.008119717853296609 134.6585302121811 6.603794396211124e-06 5.180206456605637 -0.11396848711285457 HSPIAPSS(ph)PSPQVLAQK ddPTM_A549_PD325901_60min_R1 1 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 HS(0.003)PIAPS(0.162)S(0.659)PS(0.176)PQVLAQK 57.989 0.0021160999999999997 5033000.0 2238.7 2729.2 2381.1 2739.1 3302.9 2997.0 2759.1 3104.7 2535.4 3097.6 3056.6 True False 2465.9711759561646 2959.1992621282347 2542.695764717477 2908.2879860525527 3070.915698386422 2972.5934256521846 2864.0990603374535 3042.7743229099665 2428.845955091002 2902.017007360278 2680.6575773838317 0.9199127843709196 1.1039079691096705 0.9485343395477621 1.0849158842924187 1.145582980942855 1.108904565331789 1.068431523854923 1.1350850435285882 0.9060634881465974 1.0825765408622166 1.0 11.3883712283537 -8.767316424436308 24.99945557394647 0.9556410916687679 1.0668700852989643 0.06824379444394046 0.0800306061538911 120.45965497440251 512403.59633338556 0.012526140821315139 0.013506659309676117 1.7087698616369001e-09 8.767316424436308 0.11122899363019645 HSPQQPSNGS(ph)LR ddPTM_A549_MK2206_60min_R1 2 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HSPQQPS(0.08)NGS(0.92)LR;HSPQQPS(0.283)NGS(0.717)LR 77.42 0.00033008 184576000.0 3228.3 4027.2999999999997 3496.5 3259.3999999999996 1550.59 1311.66 1147.8 1453.42 1700.3600000000001 5208.2 5273.0 True False 3773.158115642841 4232.272368010896 3992.3562764764674 4057.9531463200246 1322.5002650541517 1450.4589905905586 1356.3404026361493 1659.446735912074 1315.2311749169628 4031.6640027480075 3963.5685726034803 0.9519598428858347 1.0677934014475539 1.0072630770341582 1.023813029089225 0.33366403048893484 0.3659477473447169 0.34220182590287157 0.41867491517172417 0.33183005436261437 1.017180333554769 1.0 11.952584220940578 -6.738337597403242 24.32049421219708 0.5861775317001651 1.016253522027197 0.46503030931811407 0.23902809448537105 162.2127350106262 170768.71799051698 0.04229093812279175 0.08798486254950609 1.8266797005725633e-07 6.738337597403242 0.43007599032703203 HSPQQPSNGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HSPQQPS(0.035)NGS(0.965)LR;HSPQQPS(0.063)NGS(0.937)LR 68.283 0.0013154000000000002 202302000.0 4740.8 4638.6 4517.0 4727.8 5272.6 4393.7 4518.6 4578.4 5289.3 4533.700000000001 5580.3 True False 5222.0825260075 5029.511101168115 4823.550782927571 5019.825468387156 4902.270765482534 4357.919163926593 4690.557795672796 4487.08022031468 5067.009115036218 4247.441408273919 4893.9584764362335 1.0670467579876577 1.027697951542611 0.9856133447294932 1.025718851632468 1.0016984796839457 0.8904691743727292 0.9584384130468647 0.9168611139467941 1.0353600545311532 0.8678948603108895 1.0 12.25678614535735 -5.41902669709176 2.3450428641667704 0.9960272945359302 1.0732324115317644 0.07419714955667189 0.05870222009176526 0.6081482906797807 4.961274075916952 0.006952908715365585 0.08231374642916035 3.810423991114155e-06 5.41902669709176 0.07720511699583421 HSPT(ph)EDEESAK ddPTM_A549_MK2206_60min_R1 1 HSPTEDEESAK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.416)PT(0.584)EDEESAK 114.72 1.9835e-05 7894200.0 484.53 557.3 595.38 837.97 1013.6 584.31 661.23 1083.2 579.0 777.52 663.34 True False 566.3068183788449 585.6641895792394 679.8138366619646 1043.272687617903 864.5007827078011 646.1412963664125 781.3669319002447 1236.7469171608743 447.8574244730064 601.8776919889076 498.6143707473529 1.1357611244337593 1.1745834535442912 1.3634060238637309 2.0923438007897444 1.7338063911235368 1.2958737940062526 1.5670766382627228 2.480367574057612 0.8982040044327865 1.2071005717038952 1.0 8.961780653645386 HSPT(ph)EDEESAK ddPTM_A549_PD325901_60min_R1 1 HSPTEDEESAK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.267)PT(0.733)EDEESAK 184.31 1.1362e-18 15377000.0 1525.5 1601.3 1687.4 1840.3 1906.2 1330.6 1609.7 1318.9 2149.7 1920.6 1294.0 True False 1680.367636986255 1736.247170762838 1801.917111160501 1953.9711513754567 1772.3150880330022 1319.7640347590238 1670.9580143616379 1292.5935048429653 2059.3555847831217 1799.3329882283542 1134.846203341843 1.4807007610705183 1.5299405026425759 1.5878073221325482 1.721793795160518 1.561722709926658 1.1629452791687924 1.472409221127125 1.1390032420574658 1.8146560994069734 1.5855302532887374 1.0 10.148281078468782 -11.046040091888884 1.3341019025255794 0.9988067187054029 1.5260582179028626 0.0 0.2572475737171033 0.32181451325982524 1.0173806886861376 0.15280557662935365 0.03378383142260367 8.994145482563315e-12 11.046040091888884 0.5272514991974596 HSPT(ph)EDEESAKAEADAYIR ddPTM_A549_MK2206_60min_R1 2 HSPTEDEESAKAEADAYIR 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.162)PT(0.838)EDEESAKAEADAYIR;HS(0.436)PT(0.561)EDEES(0.002)AKAEADAYIR 56.247 0.0044895000000000004 4418200.0 1279.78 1617.78 1777.6899999999998 1402.6699999999998 1738.232 1811.3700000000001 1542.59 1470.2600000000002 2175.14 2417.39 2646.3399999999997 True False 1495.775576383048 1700.1180919029287 2029.7931729241946 1746.3242129682494 1482.540375422006 2003.0479711099076 1822.8586353916155 1678.6738574824103 1682.474262984829 1871.29992004973 1989.1807427315553 0.7519555886756876 0.8546825612077442 1.0204166616538173 0.8779112804853451 0.7453019947227986 1.006971326476502 0.9163866290443043 0.8439021258456609 0.8458126638982263 0.9407390087036783 1.0 10.957958654245298 -10.83077795782736 1.008203759537993 1.0020901092424328 0.8762217740791928 0.15262964887524977 0.08395960651424697 0.6660081555474519 1.169230834660386 0.06134276671067085 0.014141213901666618 1.47646121213232e-11 10.83077795782736 -0.12586833516324003 HSPT(ph)EDEESAKAEADAYIR ddPTM_A549_PD325901_60min_R1 1 HSPTEDEESAKAEADAYIR 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.04)PT(0.96)EDEESAKAEADAYIR 108.96 5.1142e-10 7009800.0 927.53 830.09 1006.4 1318.9 873.61 1350.7 1129.0 1221.4 1306.1 1209.5 1423.9 True False 1021.6921627885032 900.0445975011082 1074.70035597483 1400.3654575607716 812.2506473908879 1339.700347023157 1171.9647128125055 1197.0382188302358 1251.2091590850982 1133.1319635854384 1248.7693268457886 0.8181592395203607 0.720745279494085 0.860607586101885 1.1213964240280412 0.6504409020379417 1.0728165067979747 0.9384957554752882 0.9585743284180289 1.0019537893723514 0.9073989400809247 1.0 10.286291291031178 -4.957572552316716 0.34189815922903727 1.0060090015718244 0.5179068610125754 0.20036987125213923 0.12202817449048908 6.638705777303949 0.45486493507841963 0.03267697943355642 1.3923115994976616 1.1026240164286396e-05 4.957572552316716 -0.48810214055924894 HSPT(ph)PQQSNR ddPTM_A549_MK2206_60min_R1 1 HSPTPQQSNR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 HS(0.389)PT(0.611)PQQSNR 58.172 0.010439 64702000.0 421.92 697.45 410.64 335.08 1000.8 601.21 631.18 704.05 1073.7 1099.2 958.87 True False 493.1297810463794 732.9472259501896 468.8749267474032 417.17461504231284 853.5836457517432 664.8296431491012 745.857235873745 803.8512435626966 830.5086643465755 850.8899565724453 720.7561155342879 0.6841839707191776 1.0169143350339311 0.6505320130372142 0.5788013532608964 1.1842891476806852 0.9224058302388054 1.034826094150932 1.115288828270033 1.1522741832456453 1.1805518374848485 1.0 9.493367362651423 -6.767200015241411 24.999747338360102 1.068920883850001 0.7470529480160865 0.6386740318020548 0.1267248386991159 71.14718882638921 308762.9538885816 0.01795102583783618 0.03458923574500108 1.7092279452495827e-07 6.767200015241411 -0.3218679358339146 HSPTEDEES(ph)AKAEADAYIR ddPTM_A549_MK2206_60min_R1 1 HSPTEDEESAKAEADAYIR 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HSPTEDEES(1)AKAEADAYIR 177.47 6.2618e-35 4239700.0 479.92 632.5 345.05 565.2 805.58 557.87 503.45 634.93 808.01 549.61 674.04 True False 560.9187630825235 664.6915483740697 393.9832784779651 703.6740253727919 687.080249145373 616.9034331158643 594.9203482376455 724.9332718915746 624.9970251268289 425.4527192792776 506.65726544237623 1.1070970483227356 1.3119155565522376 0.7776130045899323 1.3888560835269874 1.3561046016886082 1.217595157896787 1.1742066852987973 1.4308159012752253 1.233569649062719 0.839724895502689 1.0 8.984866338085787 -10.551209182813393 0.9707974440790536 1.0066476684509615 1.2228185299172194 0.27541419532833145 0.17648262637958542 0.6727544481924949 1.1822196498443196 0.09335086374833056 0.029546712061096846 2.8105467729171098e-11 10.551209182813393 0.21617086146625786 HSQPAT(ph)PTPLQSR ddPTM_A549_MK2206_60min_R1 1 HSQPATPTPLQSR 13 0 Q9NR12-2;Q9NR12 Q9NR12-2 PDLIM7 PDZ and LIM domain protein 7 1 HSQPAT(0.974)PT(0.026)PLQSR 88.992 0.00016854 7375400.0 661.73 799.4 735.5 763.42 1239.4 1160.8 890.63 902.01 1151.9 1332.6 1385.4 True False 773.4138462547894 840.0860454865316 839.8049596306131 950.4579342712262 1057.085901823252 1283.6350855233222 1052.445942498548 1029.8726797897705 890.9964892063152 1031.5647344691047 1041.3669449051506 0.7426909890300323 0.8067147220262959 0.8064448019397273 0.9127022313520768 1.0150945418375394 1.2326443544261314 1.0106388988507855 0.988962329588417 0.8556028147095341 0.9905871696004921 1.0 10.024262803168654 -6.316611414590341 2.7638467760428704 0.9685982990560836 0.7811644794918262 0.5142482318574658 0.09091669840080434 0.23932656786332293 3.577770740699916 0.01566195836905644 0.04305076660433844 4.82379213861597e-07 6.316611414590341 -0.18743381956425742 HSS(ph)APPK ddPTM_A549_PD325901_60min_R1 2 HSSAPPK 7 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 HS(0.114)S(0.886)APPK;HS(0.114)S(0.886)APPK 52.716 0.014341 10642600.0 3360.9900000000002 3684.54 3421.31 3452.4799999999996 3962.48 3579.58 3020.25 3449.5 3964.95 4802.3 4474.5 True False 3702.1952305699365 3995.049116694254 3653.5006706083554 3665.7318484490206 3684.169074613893 3550.429087285967 3135.1872664942143 3380.697016419602 3798.3169399850385 4499.0819584343535 3924.1648661924864 0.9434351911320379 1.0180635250859233 0.9310262935393055 0.9341431803821697 0.9388415625331626 0.9047604288682332 0.7989438194874324 0.8615073860797808 0.9679300104611673 1.1465068649879877 1.0 11.938169939532644 -8.951084147602367 8.288957284792883 0.9859597913002948 0.9170141489118251 0.30823969147963537 0.07072589179949054 0.2795619823961529 41.899227290704005 0.01001663045502366 0.010570530292481164 1.1192210055360604e-09 8.951084147602367 -0.06894564238846967 HSS(ph)ETFSSTPSATR ddPTM_A549_MK2206_60min_R1 3 HSSETFSSTPSATR 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 HS(0.211)S(0.681)ET(0.104)FS(0.003)S(0.001)T(0.001)PSATR;HS(0.034)S(0.965)ET(0.001)FSSTPSATR;HS(0.186)S(0.69)ET(0.122)FS(0.001)STPSATR 77.77600000000001 0.00069679 25255200.0 4182.92 4958.1 3927.1 4315.3 6041.6 4973.71 4128.29 5409.6 6892.9 5792.0 6391.5 True False 4888.894633424637 5210.446112242652 4484.021831360142 5372.54869372118 5152.888643259125 5500.024690918503 4878.34685554869 6176.4273662051955 5331.669155699459 4483.583177281299 4804.314153573897 1.0176051101462258 1.0845348463248674 0.9333323525532793 1.1182758916222364 1.072554474695608 1.1448095430701741 1.0154096296803823 1.2856002269565558 1.1097669688676097 0.9332410483494281 1.0 12.230114776460121 -6.29730520355344 24.98851391246726 1.078645151438926 1.0190950333121884 0.10767508361742761 0.09182511607740512 1119.8391265815806 780215.5549551551 0.012226492633868923 0.028413067945719028 5.043067678158352e-07 6.29730520355344 -0.059550118126737495 HSS(ph)ETFSSTPSATR ddPTM_A549_PD325901_60min_R1 2 HSSETFSSTPSATR 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 HS(0.21)S(0.785)ET(0.005)FSSTPSATR;HS(0.007)S(0.956)ET(0.036)FSSTPSATR 102.5 2.732e-05 21194900.0 5994.2 6599.4 6985.8 7472.4 9014.0 8205.3 8390.3 8826.3 8917.9 8193.5 8348.5 True False 6602.726771303188 7155.554598596316 7459.898397027987 7933.953176948305 8380.887736611827 8138.478757258541 8709.597457848326 8650.252522401595 8543.111675832622 7676.161011688538 7321.687425501832 0.9018039677992172 0.9773094892952046 1.018876928704271 1.083623585092409 1.144666147235505 1.1115577986724454 1.1895614974646866 1.1814561343157453 1.1668227799614204 1.048414192738146 1.0 12.837960468669998 -5.7949275000256755 1.4013553986609677 1.1034081434955811 0.9012008842474378 0.6127830084973622 0.055712529889928177 0.4228792720351769 1.3090861807781593 0.01113046878577941 0.09106210541747888 1.6035130545841217e-06 5.7949275000256755 -0.2022072592481433 HSS(ph)IS(ph)PVRLPLNSSLGAELSR ddPTM_A549_MK2206_60min_R1 1 HSSISPVRLPLNSSLGAELSR 21 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HS(0.392)S(0.614)IS(0.986)PVRLPLNS(0.003)S(0.003)LGAELS(0.001)R 40.104 0.028096 9026600.0 361.14 524.39 599.63 428.59 695.89 751.63 594.47 690.05 1074.9 819.05 942.32 True False 422.09160297470936 551.079211149215 684.6665505687353 533.5945692401361 593.5255028399089 831.1669877083858 702.477504055682 787.8667006894948 831.4368662625818 634.0260361450705 708.3159372910513 0.5959086627204737 0.7780132877664917 0.9666118105251691 0.7533284811871723 0.8379389359920976 1.1734410366187402 0.9917573035872969 1.112309718319603 1.1738220509938058 0.895117563738433 1.0 9.468249193437691 -7.15676341530237 5.191162349053108 1.084441740580496 0.7890626295022407 0.5873080359704811 0.11251186181690896 0.11007989076838312 4.48555554509378 0.015480849404064422 0.027127739162050545 6.97006109245394e-08 7.15676341530237 -0.2953791110782553 HSS(ph)IS(ph)PVRLPLNSSLGAELSR ddPTM_A549_PD325901_60min_R1 2 HSSISPVRLPLNSSLGAELSR 21 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HS(0.122)S(0.878)IS(1)PVRLPLNSSLGAELSR;HS(0.178)S(0.872)IS(0.951)PVRLPLNSSLGAELSR 82.84899999999999 2.812e-05 21029000.0 2946.0 3679.8 3527.7 3660.1000000000004 3937.1 4019.7 3234.4 3798.7 3919.0 3918.0 4193.0 True False 3245.075751269423 3989.9096602592217 3767.1109357833966 3886.17606430979 3660.571678257649 3986.964895927288 3357.486861931592 3722.9319484774996 3754.298058689608 3670.616811349939 3677.2875816169594 0.8824645011425823 1.085014313322973 1.0244265242173256 1.0568050439506227 0.9954542844451779 1.0842135153797678 0.9130335301258254 1.0124125094509115 1.020942195942909 0.9981859536087501 1.0 11.844426291322664 HSS(ph)NPPLESHVGWVMDSR ddPTM_A549_MK2206_60min_R1 2 HSSNPPLESHVGWVMDSR 18 0 Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8 Q6PKG0 LARP1 La-related protein 1 1 HS(0.192)S(0.808)NPPLESHVGWVMDSR;HS(0.23)S(0.77)NPPLESHVGWVMDSR 112.18 3.5722000000000003e-10 29951000.0 6424.8 7946.099999999999 7670.200000000001 7049.4 9246.8 7837.0 7629.4 6485.9 11601.3 11886.5 14790.0 True False 7509.149168721033 8350.522549462765 8757.949695933019 8776.503316459586 7886.607969161892 8666.30613822043 9015.563223446796 7405.296187235704 8973.624073469244 9201.331394467223 11117.234816765686 0.6754511614162032 0.7511330548554668 0.7877812999618687 0.7894502060192083 0.7094037410515295 0.7795379229690231 0.8109537463264337 0.6661095415622525 0.8071813019489609 0.8276636723181267 1.0 13.440510371547175 -10.172156483221553 0.5862631253330712 1.010446014467233 0.7469082598365708 0.37593006082649627 0.06828245006186409 0.2882522106689083 0.1824878579236096 0.0368763323669634 0.011157056786945133 6.727342157525687e-11 10.172156483221553 -0.2635377546306621 HSS(ph)NPPLESHVGWVMDSR ddPTM_A549_PD325901_60min_R1 4 HSSNPPLESHVGWVMDSR 18 0 Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8 Q6PKG0 LARP1 La-related protein 1 1 HS(0.235)S(0.765)NPPLESHVGWVMDSR;HS(0.217)S(0.783)NPPLESHVGWVMDSR;HS(0.231)S(0.769)NPPLESHVGWVMDSR;HS(0.147)S(0.853)NPPLESHVGWVMDSR 90.884 6.6889e-06 71299600.0 11384.32 12783.4 12151.170000000002 15685.06 14683.29 15142.85 12120.679999999998 13083.679999999998 17406.100000000002 17094.9 24619.13 True False 12540.047785706565 13860.701981346208 12975.821467121099 16653.890532844154 13651.986365000574 15019.531650195924 12581.939110090583 12822.715738451594 16674.582148343252 16015.525096566125 21591.133083523375 0.5807961878237936 0.6419626949510856 0.6009791805240277 0.7713300857541873 0.632295966691006 0.6956342491194976 0.582736397456237 0.5938880413940325 0.7722884243193313 0.741763993330572 1.0 14.398151336253346 -9.717307035504389 0.6778514756398208 0.9846556828878418 0.637409550962692 0.39486512982273003 0.09334165405110031 0.18927490588169749 0.18488684065515237 0.029194494099245943 0.014915140294554735 1.9173127684929847e-10 9.717307035504389 -0.34724613192514975 HSS(ph)PAPAQPK ddPTM_A549_MK2206_60min_R1 2 HSSPAPAQPK 10 0 I3L4X5;Q70CQ4 I3L4X5 USP31 Ubiquitin carboxyl-terminal hydrolase 31 1 HS(0.111)S(0.889)PAPAQPK;HS(0.352)S(0.648)PAPAQPK 102.4 0.00012283 25820000.0 3574.7 4602.6 4309.200000000001 4059.7999999999997 5566.7 4262.7 3945.6 4504.7 5387.6 6496.700000000001 6755.0 True False 4178.021966975951 4836.8526807059225 4920.309356954778 5054.451182251348 4747.845804162897 4713.776084648745 4662.4644473263525 5143.255020065165 4167.317202229311 5029.090957845894 5077.547071484262 0.8228425868151797 0.9525963250778924 0.9690327411413794 0.9954513687598049 0.9350668220934903 0.9283569444627168 0.9182513488670478 1.0129408841820338 0.8207343316683672 0.9904567869177422 1.0 12.309915993773792 HSS(ph)PHQS(ph)EDEEDPR ddPTM_A549_MK2206_60min_R1 1 HSSPHQSEDEEDPR 14 0 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 2 HS(0.469)S(0.531)PHQS(1)EDEEDPR 55.864 0.0052902 30128000.0 182.33 359.24 282.42 304.72 559.16 499.44 376.34 335.72 767.43 464.14 555.23 True False 213.10284645948605 377.52378156189866 322.4714027177129 379.37641367940074 476.908304714773 552.2904092985593 444.7161065761357 383.30933809938034 593.608330333885 359.29045164077013 417.3510674315629 0.5106081260818401 0.9045712615166723 0.7726622210462938 0.9090102872244619 1.1427029710256493 1.323323341898781 1.065568393805678 0.9184338270854795 1.42232373811102 0.8608830303271872 1.0 8.705117650569255 -6.117075561026064 0.8359846989687549 1.1831230667657675 0.5790935105262754 0.4217676858396162 0.18334945839920055 0.5995553867062758 0.5883642258151297 0.03071414684477404 0.25386628984676857 7.637028986405125e-07 6.117075561026064 -0.6040295562394921 HSS(ph)PHQS(ph)EDEEDPR ddPTM_A549_PD325901_60min_R1 2 HSSPHQSEDEEDPR 14 0 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 2 HS(0.426)S(0.574)PHQS(1)EDEEDPR;HS(0.099)S(0.901)PHQS(0.999)EDEEDPR 74.12 0.00033013 58790100.0 524.0 659.93 486.20000000000005 642.94 706.16 805.81 695.86 426.53 859.31 599.23 451.42 True False 577.1960942515881 715.5446171245362 519.1964557581106 682.652943577317 656.5617577197486 799.2477505254544 722.3413330892024 418.0225245436883 823.1961890310201 561.3945155347685 395.89820178715206 1.4579406818369631 1.8073954715996325 1.311439287711763 1.7243143325625252 1.6584105579563553 2.018821371043146 1.8245633090234568 1.0558838677636404 2.079312776150465 1.418027444935435 1.0 8.628985704279259 -11.03945302616324 1.3187367465742499 0.9977476367551 1.7023878237906807 0.1948209842597186 0.30903046595704015 0.3371510226639813 1.0394955293084651 0.21232141992401202 0.04688547287602088 9.131601985061613e-12 11.03945302616324 0.7046401870355806 HSS(ph)PMGR ddPTM_A549_MK2206_60min_R1 1 HSSPMGR 7 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 HS(0.417)S(0.583)PMGR 41.448 0.032854 5136100.0 485.24 367.31 114.31 269.31 391.8 359.28 320.13 439.02 452.47 336.53 349.69 True False 567.1366490210113 386.0045100921419 130.520876866588 335.2909620897854 334.1667390143215 397.2987711292378 378.29347717016077 501.25242944236237 349.9862674461162 260.5076392697644 262.8523220469774 2.1576246487168245 1.4685223515855208 0.4965559210211622 1.2755868370448014 1.2713098229910202 1.5114904370456044 1.4391863622287175 1.9069735642387733 1.3314939153688208 0.9910798475777058 1.0 8.038108669561295 -10.102856373698522 1.0590020464709264 1.0389159420871863 1.4020102849128788 0.1453760520546662 0.3944191363148444 0.7490400169009699 1.6832417856475241 0.14799280521235025 0.07518793679764442 7.891210460964935e-11 10.102856373698522 0.36309434282569253 HSS(ph)PSGTVAAR ddPTM_A549_PD325901_60min_R1 1 HSSPSGTVAAR 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 HS(0.035)S(0.959)PS(0.005)GT(0.001)VAAR 60.255 0.0084129 3149000.0 462.86 620.12 460.56 655.73 636.69 659.71 668.74 726.99 656.57 569.06 555.98 True False 509.84920646047703 672.3796887113289 491.8163711722653 696.232952829119 591.9710908612591 654.3375404861533 694.1892666485692 712.4896141373779 628.9766461836787 533.1294544836126 487.5979846476025 1.0456343596845585 1.3789632235606388 1.0086513616903308 1.4278831634882605 1.2140556554783326 1.3419611259448847 1.4236918291413254 1.4612234598391733 1.2899492327439654 1.0933791181867099 1.0 8.92954835276132 -10.465152555388896 0.9316336158769677 1.0101227642251194 1.291877620157614 0.285853397079991 0.14437629070087854 0.4384678383421564 0.7166706458397517 0.07570150336326739 0.02535768492718954 3.426474030462159e-11 10.465152555388896 0.2817548559324947 HSS(ph)PTEERDEPAYPR ddPTM_A549_MK2206_60min_R1 2 HSSPTEERDEPAYPR 15 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 HS(0.016)S(0.963)PT(0.021)EERDEPAYPR;HS(0.022)S(0.969)PT(0.009)EERDEPAYPR 183.77 8.052199999999999e-34 91479000.0 3010.2 4055.0 4224.299999999999 3590.2 5795.299999999999 4474.9 3981.5 4536.1 6379.1 5999.7 5175.7 True False 3518.2481676758903 4261.382179694629 4823.369260323045 4469.799161170204 4942.819046987486 4948.430947801783 4704.88701262923 5179.106066223637 4934.244035329461 4644.363603027381 3890.430847946866 0.9043338142181884 1.0953496788006214 1.2398033659610033 1.1489213755152834 1.2705068513416726 1.2719493395990487 1.2093485777062931 1.3312422887446658 1.2683027222893466 1.1937915836438515 1.0 11.925714220792916 -5.336600468368761 3.038865337351982 1.1745893851985751 0.8823512209531743 0.4673293917353021 0.09026933925097039 0.30690909735476857 4.394330878053745 0.017159006455459643 0.1939981350802105 4.60680184005168e-06 5.336600468368761 -0.29223816424540083 HSS(ph)PTEERDEPAYPR ddPTM_A549_PD325901_60min_R1 2 HSSPTEERDEPAYPR 15 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 HS(0.011)S(0.966)PT(0.024)EERDEPAYPR;HS(0.001)S(0.903)PT(0.096)EERDEPAYPR 206.81 4.8109e-40 119739000.0 4357.6 6015.5 6145.0 6393.799999999999 6623.700000000001 6527.9 6278.0 5796.299999999999 6355.9 5575.0 5028.0 True False 4799.980344104427 6522.447296399088 6562.036652886854 6788.730504626633 6158.474162524495 6474.738946718346 6516.91272545342 5680.688249390611 6088.78362623763 5222.99354856455 4409.587875118073 1.088532642968568 1.4791512225446786 1.4881292399034336 1.5395385457523862 1.3966099184177374 1.4683319915798199 1.477896100500984 1.2882583158042866 1.380805598771426 1.1844629694389972 1.0 12.106428110896783 -10.54562650460488 0.5304980427600441 0.9407628142368031 1.425900532561908 0.4386614017903412 0.1291659486237755 0.6098577013304712 0.25686621548591265 0.14599642725881298 0.027142448742570723 2.8469084102163592e-11 10.54562650460488 0.485137718325105 HSS(ph)PTGGPR ddPTM_A549_MK2206_60min_R1 2 HSSPTGGPR 9 0 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8;A0A494C1G2;F6RJN6;A0A494C1B5;A0A494C0L9;A0A494C0K4;Q02297-3;Q02297-12;A0A494C043 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 1 HS(0.077)S(0.923)PTGGPR;HS(0.045)S(0.853)PT(0.102)GGPR 140.05 4.1534e-05 116215000.0 2157.38 2880.1 2478.8 2051.44 5463.950000000001 4346.31 4383.91 4891.679999999999 6463.09 6276.969999999999 5047.43 True False 2521.4930011230517 3026.684788098273 2830.331113436254 2554.042892092641 4660.210193050801 4806.233639352921 5180.409700749815 5585.090620141715 4999.210434433927 4858.998117455004 3794.013829018772 0.6645977360011821 0.7977527032053677 0.7459991557722522 0.6731770117857429 1.2283060639913506 1.2667939169309603 1.3654166627246058 1.4720796686147453 1.3176574097324387 1.280701214183941 1.0 11.88950922198302 -6.763926782697522 24.999980006683476 1.2080752636260903 0.7277379315338769 0.8148601799733952 0.1247138873060517 30.640648596548335 307962.83271050546 0.024354665608355062 0.04759534219966092 1.7221588876774963e-07 6.763926782697522 -0.4803373320922134 HSS(ph)PTGGPR ddPTM_A549_PD325901_60min_R1 2 HSSPTGGPR 9 0 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8;A0A494C1G2;F6RJN6;A0A494C1B5;A0A494C0L9;A0A494C0K4;Q02297-3;Q02297-12;A0A494C043 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 1 HS(0.001)S(0.991)PT(0.008)GGPR;HS(0.041)S(0.959)PTGGPR 161.44 7.2338999999999995e-06 143748000.0 9407.8 10800.4 9757.0 11641.2 13507.8 10777.7 8529.0 9919.599999999999 10469.5 9332.9 8988.7 True False 10362.87293034369 11710.5876120071 10419.168693607337 12360.250484916569 12559.058727380223 10689.929984535049 8853.57576224788 9721.745796224339 10029.503323666977 8743.619101237326 7883.146884064002 1.3145604265337898 1.4855219348608582 1.3217017070517831 1.5679335507376064 1.5931529517442717 1.356048560524102 1.1231017121025142 1.2332315938292504 1.272271526989037 1.1091533913839398 1.0 12.944555940707902 -7.640198678023761 3.9105859883478447 1.140881208605813 1.4585027193205264 0.6694214893637667 0.1037794671403198 0.12427645104295051 3.563545848898151 0.01996691113469793 0.03004558849683802 2.289819882223855e-08 7.640198678023761 0.31762151071471334 HSS(ph)YPAGTEDDEGMGEEPSPFR ddPTM_A549_MK2206_60min_R1 6 HSSYPAGTEDDEGMGEEPSPFR 22 0 Q92934 Q92934 BAD Bcl2-associated agonist of cell death 1 HS(0.202)S(0.796)Y(0.001)PAGTEDDEGMGEEPSPFR;HS(0.176)S(0.822)Y(0.002)PAGTEDDEGMGEEPSPFR;HS(0.174)S(0.826)YPAGTEDDEGMGEEPSPFR;HS(0.18)S(0.82)YPAGTEDDEGMGEEPSPFR;HS(0.176)S(0.824)YPAGTEDDEGMGEEPSPFR;HS(0.19)S(0.81)YPAGTEDDEGMGEEPSPFR 213.71 1.0159999999999998e-73 66801300.0 8303.94 10736.91 9912.46 8331.76 13529.320000000002 10209.1 10992.49 10336.61 15573.07 14797.52 15634.080000000002 True False 9705.442060158968 11283.37285794947 11318.195880543939 10373.041574026916 11539.17495018184 11289.420185747886 12989.683143904722 11801.8561220405 12045.794510082633 11454.749954676034 11751.706457342807 0.8258751267646518 0.9601476091073812 0.9631108402535022 0.8826838563131008 0.981914838671947 0.9606622005686611 1.1053444187919101 1.00426743680841 1.0250251360351221 0.9747307760158334 1.0 13.520582644322028 -7.119104758925241 1.9595423210629352 1.0171516503941267 0.9161010218724833 0.4854961240578174 0.04940975902437229 0.209190328487639 1.5749653933491148 0.0068937895516719356 0.01350572403453112 7.601428959368793e-08 7.119104758925241 -0.10105062852164337 HSS(ph)YPAGTEDDEGMGEEPSPFR ddPTM_A549_PD325901_60min_R1 3 HSSYPAGTEDDEGMGEEPSPFR 22 0 Q92934 Q92934 BAD Bcl2-associated agonist of cell death 1 HS(0.216)S(0.781)Y(0.001)PAGT(0.002)EDDEGMGEEPSPFR;HS(0.292)S(0.703)Y(0.004)PAGT(0.001)EDDEGMGEEPSPFR;HS(0.177)S(0.823)YPAGTEDDEGMGEEPSPFR 150.03 9.477199999999999e-28 42573300.0 11583.51 12613.710000000001 10097.880000000001 13388.11 15018.400000000001 13666.440000000002 12190.380000000001 12305.080000000002 13628.58 13970.11 17077.02 True False 12759.459407870643 13676.7116095191 10783.182860285287 14215.063148096095 13963.559394667303 13555.14504373374 12654.291581731894 12059.645526251485 13055.818177263589 13088.034870446108 14976.654800148937 0.8519565669460283 0.9132020328987679 0.7199994260519413 0.9491480799807666 0.9323550272740773 0.9050849622039056 0.8449344496880606 0.8052295847889581 0.8717446153017931 0.8738957427473025 1.0 13.87042779759329 -10.469392775979435 0.8054241719607209 1.0001651000380185 0.8667309075540238 0.027915200713831245 0.07094328759541273 0.5143933444490731 0.6026744038207493 0.04033415250084351 0.011758487339389957 3.393182543093871e-11 10.469392775979435 -0.13343419248399468 HSTENDS(ph)PTNVQQ ddPTM_A549_PD325901_60min_R1 1 HSTENDSPTNVQQ 13 0 B3KVN2;P49354-2;P49354 B3KVN2 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha 1 HST(0.002)ENDS(0.996)PT(0.002)NVQQ 79.633 0.00074686 2645900.0 217.02 308.96 205.41 194.98 296.83 235.44 407.53 351.56 379.79 287.27 313.95 True False 239.05171063832003 334.9971434952143 219.35035783067357 207.0234717682912 275.9816848079088 233.52265469988316 423.03877715897266 344.5478600065154 363.8287470553016 269.1317231741952 275.3361402930228 0.8682177006763894 1.2166842432624283 0.7966638800022143 0.7518935638015743 1.0023445687667407 0.8481365884309985 1.5364447860304835 1.2513717219971012 1.3213984428927554 0.9774660271178907 1.0 8.105050178565778 -7.670789627190091 24.99586630443364 1.1910315126541893 0.9190616658283871 0.4018803888530985 0.18293439484631407 17.691123732865698 4872.571751990035 0.02968773451994614 0.04403402258798186 2.1340784131612396e-08 7.670789627190091 -0.27196984682580216 HSTPS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 HSTPSPTR 8 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 HST(0.016)PS(0.964)PT(0.019)R 53.327 0.025269999999999997 5964200.0 1084.1 891.76 960.15 888.55 1353.7 1044.9 1174.4 1186.6 1529.4 1543.8 987.0 True False 1267.0695762997254 937.1467749850758 1096.3137076673477 1106.2447898885255 1154.5725232355462 1155.4706244515153 1387.7732783201716 1354.8041838100926 1182.9933419499419 1195.0545077843342 741.9006601857832 1.707869589956197 1.2631701591293907 1.4777095728595444 1.491095572837885 1.5562360100157124 1.557446551081607 1.8705648246392612 1.8261261332087628 1.594544128931901 1.6108012459310583 1.0 9.535082214017143 -10.51601150128905 0.89789390559186 1.0107233979103125 1.5861931798224143 0.0 0.23716039649272133 0.3005082866270449 0.4460325963665788 0.10699713967272985 0.03278646147636173 3.047814274218134e-11 10.51601150128905 0.5754697819121017 HSYIDTIPQS(ph)SRSPSYR ddPTM_A549_MK2206_60min_R1 2 HSYIDTIPQSSRSPSYR 17 1 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 HSYIDT(0.038)IPQS(0.331)S(0.331)RS(0.257)PS(0.042)Y(0.001)R;HSYIDT(0.003)IPQS(0.308)S(0.308)RS(0.308)PS(0.073)YR 77.08 0.00017282 10438300.0 1316.31 1442.48 1798.99 1326.6999999999998 2218.53 2087.3999999999996 1306.3400000000001 1545.69 2639.7 3024.8 2170.5 True False 1538.4709473102957 1515.8960706697683 2054.1138332098963 1651.7415595578254 1892.18717586892 2308.28728249602 1543.6850684611495 1764.7962909770959 2041.8121647347077 2341.495579185163 1631.5049472474598 0.9429765750363654 0.9291397327524276 1.2590300977483564 1.0124036475307705 1.1597802256507168 1.4148208906080066 0.9461724716590821 1.0816983999677807 1.2514900234777004 1.4351752859441467 1.0 10.671987646813626 -5.735279114351517 24.879713038556034 1.129390220510595 0.9360578471485448 0.21434120751013808 0.15782046255185384 237.18694038159896 225572.73865866574 0.018583399077630576 0.07192555697332555 1.8395893458306205e-06 5.735279114351517 -0.19333237336205022 HSYIDTIPQS(ph)SRSPSYR ddPTM_A549_PD325901_60min_R1 2 HSYIDTIPQSSRSPSYR 17 1 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 HSYIDT(0.002)IPQS(0.362)S(0.362)RS(0.234)PS(0.04)YR;HSYIDTIPQS(0.372)S(0.372)RS(0.222)PS(0.033)YR 118.96 4.5725e-10 19704800.0 2029.0500000000002 2609.2 2562.9 3356.0 3077.8 2783.3 2541.4 2829.3 2913.7 4791.299999999999 3315.6000000000004 True False 2235.0376622923372 2829.086440988196 2736.833805969687 3563.292497971001 2861.6259458335817 2760.633727600173 2638.1143677074406 2772.867391957088 2791.247321664688 4488.776500311625 2907.8022193201023 0.7686346916727129 0.9729294592978502 0.9412035618466545 1.2254246434973024 0.9841198712967083 0.9493884106896583 0.9072537155997771 0.9535955965414441 0.9599164974560522 1.5437007615191873 1.0 11.50571342912256 -2.000027595441998 0.004674286128545417 1.8813088748857802 3.7421896005863356e-05 0.0012532430741735157 0.19422045026308435 226943.84886859503 79.8993252142772 14972.98738176879 17261.322936362336 0.009999364611652977 2.000027595441998 -1.8812714529897743 HSYPPALGS(ph)PGALAGAGVGAAGPLER ddPTM_A549_PD325901_60min_R1 1 HSYPPALGSPGALAGAGVGAAGPLER 26 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HS(0.001)YPPALGS(0.999)PGALAGAGVGAAGPLER 91.603 4.3619e-09 37919000.0 1559.6 1750.6 1772.8 1943.0 1676.2 1784.1 2016.1 2080.1 2167.7 1803.7 1848.3 True False 1717.929443883162 1898.129205731234 1893.1128687124187 2063.0146971268337 1558.469494576077 1769.5708811164698 2092.8237887522505 2038.6107736931176 2076.599107379808 1689.8140741786315 1620.9708173390477 1.0598151586117261 1.1709829599814534 1.1678883101795219 1.2727031696433846 0.9614420431913935 1.0916734972572553 1.2910928231192877 1.2576480414617575 1.281083585939388 1.0424703863284814 1.0 10.66264240262475 -11.020270310137052 1.341413251260146 1.0011139867409762 1.184836573479441 0.24667534968356097 0.0997839962552123 0.4458313696800661 1.4429707923668667 0.07281113489303259 0.01688385959168795 9.543983720302372e-12 11.020270310137052 0.18372258673846487 HT(ph)AAQLGEK ddPTM_A549_MK2206_60min_R1 2 HTAAQLGEK 9 0 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 HT(1)AAQLGEK;HT(1)AAQLGEK 92.11200000000001 0.00090299 69149000.0 7648.5 7437.700000000001 7546.0 6914.4 11114.3 8807.7 8301.2 9380.7 11659.2 11239.8 8647.1 True False 8939.379812128442 7816.247161014736 8616.13626835161 8608.428310399211 9479.40119302418 9739.724967921919 9809.420587526754 10710.442952188898 9018.409815916542 8700.721373619877 6499.786422180836 1.3753343927767188 1.2025390764135593 1.325602982730114 1.324417104079379 1.4584173351720087 1.4984684626997335 1.5091912180455087 1.647814598282644 1.387493254415373 1.3386165034482125 1.0 12.666176597768885 -10.378164492263302 0.8966899854854439 1.0159751528085461 1.4118817157322006 0.1884159773406764 0.14657405807728296 0.29328606778058824 0.4489904468046289 0.06808714102323664 0.024124718239785493 4.1863497397775564e-11 10.378164492263302 0.39590656292365445 HT(ph)AAQLGEK ddPTM_A549_PD325901_60min_R1 2 HTAAQLGEK 9 0 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 HT(1)AAQLGEK;HT(1)AAQLGEK 88.803 0.00098669 89226000.0 5441.1 5323.4 6540.6 6640.700000000001 7903.5 6030.1 7017.700000000001 5540.1 6749.4 6793.5 6857.4 True False 5993.476466473884 5772.021600473923 6984.484447822905 7050.880956876045 7348.385425594812 5980.992864873283 7284.762413732787 5429.598359375626 6465.746189670746 6364.557250614036 6013.983272640147 0.996590145792464 0.9597668198933977 1.1613741061765053 1.1724144609701748 1.221883249829669 0.994514383184777 1.2113040697791575 0.9028289759429319 1.0751187518405376 1.0582931415138417 1.0 12.554105139851577 -8.254567070176211 24.99822136798876 1.0265156115813165 1.1024420988648145 0.1780645709715758 0.09393858835062734 875.8828077500453 3186050.103517751 0.01514807338057762 0.019353289236444655 5.564586910421754e-09 8.254567070176211 0.07592648728349793 HT(ph)LGGHR ddPTM_A549_MK2206_60min_R1 1 HTLGGHR 7 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 HT(1)LGGHR 52.255 0.042532 10107000.0 319.25 353.1 399.0 376.85 477.53 448.0 342.11 431.08 342.77 423.83 624.69 True False 373.13159508688045 371.0712817879593 455.5841997180349 469.17826691743926 407.2859695801659 495.40706264166784 404.26695865643234 492.18691012713214 265.1331422912133 328.086508637281 469.5622324330873 0.7946371520415066 0.7902494199016252 0.9702317781338083 0.9991822904630586 0.8673737823201193 1.055040266067956 0.8609443663338926 1.048182490267185 0.5646389849485921 0.6987071914563175 1.0 8.87517256484818 HT(ph)LGGHR ddPTM_A549_PD325901_60min_R1 1 HTLGGHR 7 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 HT(1)LGGHR 48.283 0.051127 11274000.0 261.36 309.84 242.69 359.85 247.7 274.28 249.04 168.69 185.72 417.87 287.48 True False 287.893074796937 335.95130418357445 259.16040281352514 382.07711722135423 230.30240651861007 272.0463546172441 258.5173534799171 165.3253456152551 177.91483425869714 391.48561688585977 252.1217824858677 1.1418810067038712 1.332496148770508 1.0279175415081478 1.5154466760236036 0.9134569978360332 1.0790275712591126 1.025366991027076 0.6557360652664834 0.7056702221620612 1.5527639580598471 1.0 7.97797695742287 -7.412327205247126 1.2705448165399078 0.8472365991413962 1.2287730679106732 0.03560423701147075 0.2714109416707265 0.29160694871027704 0.9321886234572196 0.02957819867129597 0.0566025745248617 3.8696598795416893e-08 7.412327205247126 0.38153646876927705 HTDDEMT(ph)GY(ph)VATR ddPTM_A549_MK2206_60min_R1 3 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 2 HT(0.008)DDEMT(0.977)GY(0.857)VAT(0.157)R;HT(0.01)DDEMT(0.988)GY(0.984)VAT(0.018)R;HT(0.001)DDEMT(0.999)GY(0.987)VAT(0.014)R 70.438 0.0016034000000000003 18561700.0 920.25 1309.17 1243.65 1177.27 2088.01 1661.58 1671.127 1597.807 2196.08 2148.51 1549.8400000000001 True False 1075.5657020476174 1375.8011610828162 1420.0182706248984 1465.701202849658 1780.8664949701213 1837.40729273246 1974.7491444817388 1824.3010353287161 1698.6713864191377 1663.160098795 1164.9719545920304 0.9232545880679824 1.1809736325923978 1.2189291467726229 1.2581429081380264 1.5286775685460816 1.5772116105369371 1.695104450109522 1.5659613333503644 1.4581221287975186 1.4276396030301293 1.0 10.18607950867639 -5.24887079166588 1.2584093289447715 1.3278547618291603 0.742524881080147 0.3010149190187109 0.19941087177974884 2.1185499782476542 2.7309316025211126 0.0391957651678484 1.6120182829755543 5.638053704069943e-06 5.24887079166588 -0.5853298807490133 HTDDEMT(ph)GY(ph)VATR ddPTM_A549_PD325901_60min_R1 1 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 2 HTDDEMT(0.999)GY(0.997)VAT(0.004)R 70.889 0.0014649 6700400.0 1091.4 1703.2 1866.5 1787.1 1926.3 1871.7 1884.3 1695.3 1671.3 1516.1 1370.4 True False 1202.1981245537847 1846.7346413809194 1993.1719141762935 1897.4851082014231 1791.0033333742376 1856.457495760158 1956.008067628525 1661.4859115628772 1601.061073102307 1420.3731872607555 1201.8494876813452 1.0002900836386028 1.5365773004935184 1.6584205714657319 1.5788042742873947 1.4902060130919645 1.5446672106518997 1.6274983578868365 1.382440920092482 1.3321643762490896 1.1818228503812027 1.0 10.231040517672911 -9.730247192026063 0.6464543648916311 1.0210373823718093 1.5028352738040236 0.4023592230860399 0.17599405636315613 0.38134630400795183 0.3384548375019761 0.08146528436841166 0.03993848273135978 1.861027574220618e-10 9.730247192026063 0.4817978914322143 HTDDEMT(ph)GYVATR ddPTM_A549_MK2206_60min_R1 8 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 HTDDEMT(0.995)GY(0.005)VATR;HT(0.003)DDEMT(0.879)GY(0.118)VATR;HTDDEMT(0.998)GY(0.002)VATR;HTDDEMT(0.998)GY(0.002)VATR;HT(0.004)DDEMT(0.95)GY(0.041)VAT(0.005)R;HTDDEMT(0.996)GYVAT(0.004)R;HTDDEMT(0.998)GY(0.002)VATR;HT(0.001)DDEMT(0.908)GYVAT(0.091)R 103.39 3.2515e-05 60779100.0 5000.290000000001 5252.830000000001 5477.660000000001 6377.7699999999995 8000.960000000001 6547.05 5518.549999999999 6124.24 9277.289999999999 8910.429999999998 6709.56 True False 5844.216706646763 5520.176610349041 6254.474554956121 7940.32393630897 6824.029382807619 7239.854485419939 6521.19910173177 6992.369774698403 7175.998627787876 6897.557674437602 5043.391077564461 1.15878713682244 1.0945366967288264 1.2401327715352413 1.5744017892309645 1.353063698185995 1.4355132041269716 1.2930187251869762 1.3864421114999348 1.4228519100393238 1.3676428356153871 1.0 12.300178384592918 -10.831168483519255 1.0412725823486755 0.9971430510696085 1.3363282325639638 0.0 0.1657821068533188 0.3946896836977114 0.7492534239612172 0.09918097018071957 0.023612753698243262 1.4751341474442423e-11 10.831168483519255 0.3391851814943553 HTDDEMT(ph)GYVATR ddPTM_A549_PD325901_60min_R1 8 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 HTDDEMT(0.998)GY(0.002)VATR;HTDDEMT(0.991)GY(0.009)VATR;HTDDEMT(0.997)GY(0.003)VATR;HTDDEMT(0.997)GY(0.003)VATR;HTDDEMT(1)GYVATR;HTDDEMT(1)GYVATR;HTDDEMT(0.991)GY(0.008)VAT(0.001)R;HTDDEMT(0.999)GYVAT(0.001)R 116.84 1.7181e-05 83112600.0 6590.96 7770.22 7568.68 7563.040000000001 9051.68 8423.2 7227.260000000001 7954.2300000000005 9455.28 8560.689999999999 8484.429999999998 True False 7260.069407191695 8425.043708989462 8082.336138970175 8030.191803889928 8415.921223400781 8354.60425190306 7502.297334208423 7795.576642677279 9057.907463221913 8020.166572423504 7440.898897233094 0.9756978971843522 1.1322615486849745 1.0862042678708617 1.0791964673617542 1.1310355562726768 1.1227950234627873 1.0082514811480854 1.047665980998085 1.2173136052943958 1.0778491527960163 1.0 12.861261201189654 -5.250383415587863 23.49187332044822 1.0970160093800685 0.9756977349142768 0.2316192439860637 0.058824949274029835 986.9771300293397 2097046.1640982076 0.010832393882126012 0.21021435726967036 5.618450829140877e-06 5.250383415587863 -0.12131827446579169 HTDDEMTGY(ph)VATR ddPTM_A549_MK2206_60min_R1 4 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 HT(0.001)DDEMT(0.176)GY(0.688)VAT(0.134)R;HTDDEMT(0.158)GY(0.839)VAT(0.002)R;HTDDEMT(0.228)GY(0.767)VAT(0.004)R;HTDDEMT(0.22)GY(0.746)VAT(0.034)R 108.35 7.8341e-05 14869500.0 1924.5499999999997 2864.67 2656.41 3076.9700000000003 3890.13 2662.16 2736.9300000000003 2942.79 3819.3 4134.18 4049.64 True False 2249.366989270026 3010.4694670051326 3033.1288821378075 3830.8277881304343 3317.897030224052 2943.868004201211 3234.1947536042503 3359.9394944164032 2954.2346481688314 3200.265866687294 3044.0026236218378 0.7389504108224675 0.9889838608033765 0.9964278146806942 1.2584837340161061 1.0899783740252915 0.9671042926692738 1.0624809349724267 1.1037899469411938 0.9705098889349189 1.0513347925040648 1.0 11.57175388696103 -5.2412331414357105 3.004331656902046 1.0227025691776088 0.6850497211308417 0.5173874417413187 0.0831869908230556 0.29533935732802713 3.716897345900335 0.01232046187333784 0.24324737612001424 5.738083431292267e-06 5.2412331414357105 -0.3376528480467671 HTDDEMTGY(ph)VATR ddPTM_A549_PD325901_60min_R1 3 HTDDEMTGYVATR 13 0 Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5 Q16539-5 MAPK14 Mitogen-activated protein kinase 14 1 HT(0.002)DDEMT(0.194)GY(0.782)VAT(0.022)R;HTDDEMT(0.149)GY(0.793)VAT(0.058)R;HTDDEMT(0.034)GY(0.958)VAT(0.008)R 83.397 0.00016577 14936300.0 2961.7 2902.37 2470.08 2831.02 4128.85 3526.29 3154.77 2848.1000000000004 3286.2200000000003 2586.17 2748.41 True False 3262.369603711696 3146.9629057683997 2637.714482597683 3005.885675687085 3838.853819759235 3497.573063377722 3274.8264987063826 2791.2924112087735 3148.111601537883 2422.8787848414677 2410.3729936064574 1.353470857981387 1.3055916715445102 1.0943179705357848 1.2470624603164042 1.5926389110489705 1.4510505521987989 1.358638894226287 1.1580333909368838 1.306068235035941 1.005188322001691 1.0 11.235040698498544 -10.58201716048806 0.5539795832162597 0.9568740450887218 1.3288849770214997 0.48869463629167675 0.12577805869936737 0.9005356399437145 0.41187204241713044 0.17034211669223387 0.031230973853250552 2.618079556730467e-11 10.58201716048806 0.3720109319327779 HTGPEEEATVHDGS(ph)EEEDDDYGLISSVEEIPEDAAS(ph)ITMR ddPTM_A549_PD325901_60min_R1 1 HTGPEEEATVHDGSEEEDDDYGLISSVEEIPEDAASITMR 40 0 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 2 HT(0.005)GPEEEAT(0.034)VHDGS(0.961)EEEDDDYGLIS(0.007)S(0.007)VEEIPEDAAS(0.803)IT(0.183)MR 88.93299999999999 1.0430999999999998e-09 8935700.0 0.0 0.0 322.41 0.0 209.44 198.56 0.0 295.01 262.58 303.43 0.0 True False 0.0 0.0 344.29068140882845 0.0 194.72965692877543 196.94299319235824 0.0 289.1257941191319 251.54467574654686 284.2713780163121 0.0 0.0 HTGPEEEATVHDGS(ph)EEEDDDYGLISSVEEIPEDAASITMR ddPTM_A549_PD325901_60min_R1 1 HTGPEEEATVHDGSEEEDDDYGLISSVEEIPEDAASITMR 40 0 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 HT(0.01)GPEEEAT(0.031)VHDGS(0.959)EEEDDDYGLISSVEEIPEDAASITMR 96.626 7.009400000000001e-10 157470000.0 1201.8 901.27 789.79 852.21 813.41 973.63 805.96 1078.3 784.65 981.54 837.93 True False 1323.8058512816006 977.2231859073396 843.3898987930859 904.8490761906635 756.2788877121617 965.7010800859978 836.6312488382347 1056.7924605900148 751.6738891938766 919.565396889336 734.8699220759122 1.8014152049413328 1.3297906970349405 1.147672361403252 1.2313050908854484 1.0291330002672745 1.3141115877460565 1.1384752916201277 1.4380673760666558 1.0228665871512272 1.251330840010002 1.0 9.52134509362312 -2.0000000000000004 0.6217990011806955 1.0701619735481223 52.393693214370536 0.5258427503485261 0.1519794089011937 80.28871486655895 0.527959422763707 0.02549065447852577 5648.836258735669 0.00999999999999999 2.0000000000000004 51.32353124082241 HTGPNS(ph)PDTANDGFVR ddPTM_A549_MK2206_60min_R1 13 HTGPNSPDTANDGFVR 16 0 P31943;G8JLB6;E9PCY7;P55795;D6RBM0;D6RIU0;D6RIH9;D6RJ04;D6RDU3;D6RIT2;D6RFM3;D6R9T0;E5RGV0;D6RAM1;E7EQJ0;E5RGH4;H0YAQ2 P31943 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 1 HTGPNS(1)PDTANDGFVR;HT(0.053)GPNS(0.922)PDT(0.025)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HT(0.001)GPNS(0.999)PDTANDGFVR;HTGPNS(0.961)PDT(0.039)ANDGFVR;HTGPNS(0.999)PDT(0.001)ANDGFVR;HTGPNS(1)PDTANDGFVR;HT(0.001)GPNS(0.991)PDT(0.009)ANDGFVR;HT(0.001)GPNS(0.999)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HT(0.042)GPNS(0.955)PDT(0.003)ANDGFVR;HTGPNS(1)PDTANDGFVR 296.95 1.7752999999999994e-124 3414513100.0 23614.3 28347.4 28018.3 24350.499999999996 37048.5 28840.5 27002.899999999998 28461.8 40720.0 40523.799999999996 37225.6 True False 27599.81652579523 29790.16157846499 31991.716248019624 30316.373593135464 31598.71472785117 31892.382567225515 31908.977398800886 32496.34731060689 31496.985016478106 31369.445434998608 27981.456145706055 0.9863609807179606 1.0646394320345796 1.143318492126757 1.0834451729485035 1.1292734217729483 1.139768509585575 1.140361574917449 1.1613529739621387 1.1256378100005182 1.121079806270642 1.0 14.77218342137757 -10.676225216998938 0.9783975380960582 1.0010652325606633 1.1112126315502349 0.0 0.058507388781812025 0.42124585051424146 0.727929029768561 0.031462475524715455 0.008653530002991645 2.1075349382807704e-11 10.676225216998938 0.1101473989895716 HTGPNS(ph)PDTANDGFVR ddPTM_A549_PD325901_60min_R1 11 HTGPNSPDTANDGFVR 16 0 P31943;G8JLB6;E9PCY7;P55795;D6RBM0;D6RIU0;D6RIH9;D6RJ04;D6RDU3;D6RIT2;D6RFM3;D6R9T0;E5RGV0;D6RAM1;E7EQJ0;E5RGH4;H0YAQ2 P31943 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 1 HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HT(0.006)GPNS(0.994)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HT(0.002)GPNS(0.997)PDT(0.001)ANDGFVR;HTGPNS(0.999)PDTANDGFVR;HTGPNS(0.5)PDT(0.5)ANDGFVR 373.62 2.6141999999999987e-264 3559857400.0 43713.07000000001 49091.439999999995 57029.96 57484.259999999995 65632.98 66605.31 60898.57 62717.36 67654.93999999999 62154.200000000004 59758.86 True False 48150.788686538704 53228.54793522366 60900.35603460882 61034.93218397328 61023.145906289006 66062.89843828019 63216.0984063262 61466.41305398292 64811.638148191334 58229.77320469788 52408.89906262494 0.9187521498782469 1.0156394980100478 1.1620231892648076 1.164591000300175 1.164366109529808 1.260528261800342 1.2062092418844252 1.1728239698478475 1.236653303301525 1.1110665220255322 1.0 15.677524182599427 -5.564015957340305 3.0310166573720805 1.1437067451508125 0.9268140874785005 0.5577183637324319 0.0678190629503813 0.2229457073314421 3.8795946382694257 0.01360144122952146 0.0823897198040939 2.7288775134540447e-06 5.564015957340305 -0.21689265767231203 HTIIPAKS(ph)PEK ddPTM_A549_MK2206_60min_R1 4 HTIIPAKSPEK 11 1 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3 Q9NZM1-5 MYOF Myoferlin 1 HTIIPAKS(1)PEK;HTIIPAKS(1)PEK;HTIIPAKS(1)PEK;HTIIPAKS(1)PEK 76.58800000000001 0.00033939 108326000.0 8747.4 10839.5 11249.699999999999 10246.900000000001 15116.3 11954.400000000001 11985.400000000001 11250.800000000001 16353.5 14118.100000000002 12808.2 True False 10223.747266602912 11391.18425075215 12845.076620471133 12757.390960000823 12892.712294441531 13219.406673311514 14162.992038469512 12845.635354129952 12649.458361173247 10928.811404553713 9627.570451663169 1.0619239109111638 1.1831836814847008 1.3341971045511423 1.3250893383799622 1.3391449441135284 1.3730781550425168 1.4710868239892076 1.3342551393026536 1.3138785558290094 1.1351577700130726 1.0 13.232956059931109 -10.533330832025857 0.8411231808141423 1.0000347098672575 1.3100328921417548 0.4021282740742016 0.10685532383140596 0.38090397510122087 0.48340131762105126 0.0719976562364073 0.020334250297667503 2.928661432124006e-11 10.533330832025857 0.30999818227449727 HTIIPAKS(ph)PEK ddPTM_A549_PD325901_60min_R1 4 HTIIPAKSPEK 11 1 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3 Q9NZM1-5 MYOF Myoferlin 1 HTIIPAKS(1)PEK;HTIIPAKS(1)PEK;HT(0.001)IIPAKS(0.999)PEK;HTIIPAKS(1)PEK 76.58800000000001 0.00051318 151848000.0 10797.4 12259.6 12424.800000000001 12728.600000000002 15826.8 15001.6 14871.4 14886.6 15873.8 12985.099999999999 13253.6 True False 11893.54409937423 13292.759517069948 13268.021644391962 13514.816713251994 14715.180167495904 14879.431943364621 15437.33926494234 14589.67508468822 15206.679388626473 12165.21856994897 11623.491221492619 1.0232333704853036 1.143611610639903 1.1414833453703217 1.1627157844161473 1.2659862589551876 1.2801172780043528 1.3281155352358902 1.2551887214153805 1.3082712499071103 1.0466062509218108 1.0 13.504755839981971 -4.981976145946927 1.1887518345481993 1.1872425928920358 0.855620131871819 0.2067564004235266 0.10022033570404902 4.734339154981197 3.5577945934304607 0.019303863236871003 2.2660472835087155 1.0423746812791887e-05 4.981976145946927 -0.33162246102021686 HTKEDSAS(ph)VK ddPTM_A549_MK2206_60min_R1 1 HTKEDSASVK 10 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 HT(0.001)KEDS(0.015)AS(0.984)VK 45.28 0.020111 4527200.0 710.39 905.69 581.46 471.87 1295.6 940.89 669.03 1003.6 1456.1 1304.7 1401.7 True False 830.28646463201 951.7857524852354 663.9197713484926 587.4781711830492 1105.018956270942 1040.4543552877653 790.5840909354096 1145.863373396098 1126.2956749138948 1009.9673638464965 1053.619205048037 0.7880327737516472 0.903348902454603 0.6301325641821639 0.5575811150445618 1.0487839923348412 0.9875051159876386 0.7503508735865962 1.087549816770714 1.0689779281904266 0.9585696226944247 1.0 10.04113783261198 -6.778944228010926 24.998126718340153 1.0132611376543574 0.7264833831398388 0.5291010827957947 0.11897995859621914 132.76755912587234 189600.99627878863 0.017592591660406807 0.033299840033584466 1.6636262791247383e-07 6.778944228010926 -0.2867777545145186 HTLGDS(ph)DNES ddPTM_A549_MK2206_60min_R1 2 HTLGDSDNES 10 0 G3V1D1;G3V192;P02794 G3V1D1 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed 1 HTLGDS(1)DNES;HTLGDS(1)DNES 130.94 1.1675e-06 514510000.0 4384.6 4793.1 3915.9 3240.5 5663.8 4630.799999999999 4119.0 4859.6 6638.4 6829.3 6757.099999999999 True False 5124.613286822044 5037.04831701463 4471.233502947001 4034.422645471574 4830.662522790495 5120.8281823237385 4867.368982800397 5548.463181900833 5134.812999346469 5286.55638684516 5079.125583527212 1.0089558138594483 0.9917156475419611 0.8803156034275375 0.7943144108419266 0.9510815283751713 1.00821058627331 0.958308453444508 1.0924051966534931 1.0109639769490764 1.0408398650332045 1.0 12.310364430302572 -7.144179516234542 4.292060560328186 1.0088050965651452 0.9165477153114507 0.3630407660422015 0.06136080038976553 0.21335827711324784 6.555759440327188 0.009167064019741156 0.01623320946091205 7.174976513046261e-08 7.144179516234542 -0.09225738125369443 HTLGDS(ph)DNES ddPTM_A549_PD325901_60min_R1 2 HTLGDSDNES 10 0 G3V1D1;G3V192;P02794 G3V1D1 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed 1 HTLGDS(0.999)DNES(0.001);HT(0.009)LGDS(0.96)DNES(0.032) 84.17 0.00092412 532250000.0 6046.4 5834.799999999999 5219.0 6303.5 6350.9 7269.9 6794.4 5603.5 6755.0 6655.1 7358.200000000001 True False 6660.226076875577 6326.519073232384 5573.192724396504 6692.852878712813 5904.834693415582 7210.696344727659 7052.964610038344 5491.733796639287 6471.11084114527 6234.89585023353 6453.188047472914 1.032083061562686 0.9803711013364729 0.8636340183173464 1.0371389814579715 0.915025976304523 1.1173851268058719 1.0929426754889475 0.8510109663997573 1.0027773549353445 0.9661729682083465 1.0 12.655796351241968 HTNYTMEHIR ddPTM_A549_MK2206_60min_R1 2 HTNYTMEHIR 10 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;H0YJ11;H0YJW3;A0A494C060;O43707;O43707-2;F5GXS2;O43707-3;H7C144 P12814-4;O43707 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 0 ; 117.28 7.3327e-05 32976000.0 1576.73 1335.49 1444.25 1384.97 1943.5300000000002 1865.6399999999999 1307.16 1701.01 2535.6000000000004 2316.8999999999996 2155.2 False True 1842.8434766525831 1403.4607366610057 1649.066367024492 1724.2877121736663 1657.639311578623 2063.060786488395 1544.6540518468967 1942.1333766246466 1961.290648521168 1793.5106808430662 1620.0043595059776 1.1375546404174866 0.8663314567184207 1.017939462537852 1.0643722666891402 1.0232313893797929 1.2734908856155966 0.9534875895753397 1.198844537194272 1.210669981850707 1.1071023792738433 1.0 10.661781980135686 -6.6469850646624264 1.8549628632830903 1.1084089695340005 0.9964552110036984 0.15816736828399536 0.10642460721727405 0.5157382015989509 3.572386411009764 0.01695303898758029 0.04313095128754083 2.254316736514195e-07 6.6469850646624264 -0.1119537585303021 HTNYTMEHIR ddPTM_A549_PD325901_60min_R1 5 HTNYTMEHIR 10 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;H0YJ11;H0YJW3;A0A494C060;O43707;O43707-2;F5GXS2;O43707-3;H7C144 P12814-4;O43707 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 0 ;;;; 126.29 7.579500000000001e-06 59934000.0 2553.94 2387.47 2783.62 2981.4800000000005 3546.2200000000003 2825.04 2589.4500000000003 3297.26 3579.2900000000004 3120.2 3993.1400000000003 False True 2813.2141086887436 2588.670475726695 2972.5331924668703 3165.6392481676326 3297.1457409948543 2802.0338108790284 2687.992936751412 3231.4935626495694 3428.864888616264 2923.190039503338 3502.009094600035 0.8033143354843404 0.7391958175432286 0.8488079591370575 0.9039494651938306 0.9415011931519333 0.800121797284781 0.767557383245005 0.922754189197398 0.9791136447656413 0.8347180034485878 1.0 11.773967115069004 -8.531031105144097 3.537019448806572 0.9898289190958915 0.8326052805837031 0.2569732419239251 0.07184035149570588 0.11817962985392651 3.1713507997078265 0.010040623509837292 0.011729513288044693 2.944210755274456e-09 8.531031105144097 -0.15722363851218846 HTPDQS(ph)PGMESR ddPTM_A549_MK2206_60min_R1 1 HTPDQSPGMESR 12 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 HT(0.004)PDQS(0.996)PGMESR 58.071000000000005 0.0031462 3264500.0 449.74 322.68 236.01 406.95 514.09 288.39 390.43 407.26 562.4 746.96 587.84 True False 525.6451169126819 339.10303372228424 269.47976685577333 506.6527682686799 438.46804201090515 318.9072383822112 461.36607719222144 464.9903521814415 435.0172979682537 578.2212172137499 441.8631044413484 1.1896107903764899 0.7674391238232378 0.6098716189406198 1.1466283633462577 0.9923164835526703 0.7217331231703732 1.0441380431062033 1.0523403006669523 0.984506951577797 1.3085980961112387 1.0 8.78745566089737 HTPDQS(ph)PGMESR ddPTM_A549_PD325901_60min_R1 1 HTPDQSPGMESR 12 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 HT(0.012)PDQS(0.987)PGMES(0.001)R 45.083999999999996 0.012965 3792000.0 352.75 519.36 455.2 297.88 616.33 564.59 571.18 665.06 599.79 622.59 844.52 True False 388.5609203191751 563.1282898940784 486.09260933996705 316.2793710654355 573.0411070230718 559.9921662292181 592.9165674616887 651.7948565705234 574.5829121259095 583.2795611481257 740.6493938533642 0.5246219379153417 0.7603169523494784 0.6563059571425303 0.427029811527873 0.7737009059599987 0.7560826632365906 0.8005360868209607 0.8800315803668469 0.7757825995597412 0.787524523733837 1.0 9.532646955718342 -12.800084021683553 0.05071560497862423 2.0742964515704925 2.8170494258881895e-11 0.41510688694704445 0.11473182967753447 110.00498573741527 0.6621065619589155 21.573886621712088 8.23706631862715 1.5845865974683121e-13 12.800084021683553 -2.074296451542322 HTPFYALPSSLERT(ph)PTK ddPTM_A549_MK2206_60min_R1 2 HTPFYALPSSLERTPTK 17 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 HTPFYALPS(0.059)S(0.398)LERT(0.453)PT(0.089)K;HTPFYALPS(0.115)S(0.249)LERT(0.521)PT(0.115)K 97.271 1.0255e-06 12131700.0 2075.77 2439.2 2749.3 2347.62 3864.7 3151.3 3046.8 2164.36 4277.9 3911.3 3777.5 True False 2426.109228295988 2563.3448613344376 3139.192080914272 2922.7870053886654 3296.207749537132 3484.768474336357 3600.3641215820016 2471.164658074511 3308.9624804025466 3027.734613484177 2839.442496303746 0.8544315412107074 0.9027634349599545 1.1055663514935508 1.0293524201294493 1.160864413992529 1.2272720714973684 1.267982755864501 0.8702992440563097 1.1653563982049293 1.0663130587872587 1.0 11.471391979612937 -5.704395445693714 4.456523827158728 1.092145052150091 0.8668298905235069 0.3948031828820108 0.10545378598614097 0.1643116582370777 6.5180057089186505 0.01518374997117307 0.06251075843324458 1.9751703349269843e-06 5.704395445693714 -0.22531516162658416 HTPFYALPSSLERT(ph)PTK ddPTM_A549_PD325901_60min_R1 2 HTPFYALPSSLERTPTK 17 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 HTPFYALPS(0.006)S(0.224)LERT(0.68)PT(0.09)K;HTPFYALPS(0.007)S(0.139)LERT(0.667)PT(0.188)K 119.38 5.7922e-10 18918600.0 3611.8 4010.9 4292.299999999999 4409.0 5587.9 5598.0 4466.5 5381.7 5734.5 4857.5 4461.0 True False 3978.4672771333694 4348.9126192547765 4583.601289696703 4681.333916434488 5195.425181208485 5552.411744010987 4636.4751016625805 5274.357771638021 5493.498907260926 4550.796621013863 3912.325280608935 1.0169060575950217 1.1115928015519938 1.1715798050880082 1.1965605057526967 1.3279635021553835 1.4192101488930338 1.1850944819549705 1.3481388671284236 1.404151882382819 1.1631948507884684 1.0 11.93381060924985 -5.6131952491304125 1.481103097709285 1.2315027307470239 1.0020207485539359 0.2858137723666059 0.11673640860621025 0.9864237203752294 3.0571626694123837 0.023713975854052206 0.2730303527413313 2.4367150792259516e-06 5.6131952491304125 -0.22948198219308802 HTPPTIGGS(ph)LPYR ddPTM_A549_MK2206_60min_R1 2 HTPPTIGGSLPYR 13 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7 H7C3Q7 ABI2 Abl interactor 2 1 HTPPT(0.041)IGGS(0.959)LPYR;HTPPT(0.222)IGGS(0.778)LPYR 118.2 4.3248000000000005e-06 53922000.0 4218.5 5186.799999999999 5188.1 4524.8 6744.799999999999 5399.9 4745.4 4894.3 8253.1 7599.5 7029.799999999999 True False 4930.479667577154 5450.785965385971 5923.85059287503 5633.376203125988 5752.648854782531 5971.313833836478 5607.577754547463 5588.082013165124 6383.786027492521 5882.767671918029 5284.106647390092 0.9330772440053609 1.0315435189178488 1.1210694613442214 1.0660981276576629 1.0886700891292305 1.130051725353766 1.0612158551563562 1.057526349496593 1.2081107467135581 1.1132946521477998 1.0 12.367443868981148 -5.396141559320531 2.6166853466266797 1.0953730421353318 0.9215789087491691 0.4726282685527805 0.05028251452979982 0.3429517992302982 3.5746243447678667 0.010041575379350697 0.11229582745853273 4.016598675191919e-06 5.396141559320531 -0.17379413338616267 HTPPTIGGS(ph)LPYR ddPTM_A549_PD325901_60min_R1 2 HTPPTIGGSLPYR 13 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7 H7C3Q7 ABI2 Abl interactor 2 1 HTPPT(0.16)IGGS(0.84)LPYR;HT(0.001)PPT(0.143)IGGS(0.855)LPYR 117.03 4.8887e-06 84043000.0 6766.299999999999 7768.900000000001 8071.1 7887.3 9956.3 9514.2 8154.3 8021.6 9213.5 8088.2 9397.2 True False 7453.209794913204 8423.612467956922 8618.853381467065 8374.480607642034 9257.003835370355 9436.719509622959 8464.616348704172 7861.602895176533 8826.288635809318 7577.509671659148 8241.403973758857 0.904361661998937 1.022108914303707 1.045799163456861 1.016147325662824 1.123231413585019 1.145037852733595 1.0270842656974513 0.953915488211519 1.070969056232745 0.919444028685696 1.0 13.0086744149639 -5.2557133483250835 3.124289658146346 1.0412283660478556 0.8825366279868851 0.25006413425525764 0.06281145365031046 0.3258392130164218 4.761653300304835 0.007546331731224646 0.12730342165752373 5.549919088820172e-06 5.2557133483250835 -0.15869173806097048 HTPS(ph)PGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPR ddPTM_A549_MK2206_60min_R1 1 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPR 40 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 HT(0.172)PS(0.828)PGLPAEGAPEAPRPS(0.515)S(0.484)PPPEVLEPHS(0.001)LDQPPATSPR 63.443999999999996 0.00025958 8789400.0 308.81 473.59 541.79 486.47 617.93 408.23 532.52 487.26 686.08 668.41 808.26 True False 360.9295783203746 497.6937081335586 618.6239688351739 605.6551718384682 527.0333155669209 451.42862763885734 629.2719909494705 556.3305971711661 530.6839754446297 517.4157167690938 607.5467351588256 0.5940770601392829 0.8191858820596754 1.0182327268591977 0.9968865550403082 0.867477817042574 0.7430352292500498 1.0357589869772987 0.9157000852382647 0.8734866714507117 0.8516475965158966 1.0 9.246851581190278 -5.368281816845228 3.061486761845912 0.9334199298323019 0.5761458225283225 0.557488055363067 0.08457408959826451 0.15872562572360277 2.3375221225873806 0.011672989894227761 0.11746071699325562 4.282705223556166e-06 5.368281816845228 -0.35727410730397946 HTPS(ph)PGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPR ddPTM_A549_PD325901_60min_R1 1 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPR 40 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 HT(0.186)PS(0.814)PGLPAEGAPEAPRPS(0.528)S(0.472)PPPEVLEPHSLDQPPATSPR 101.0 2.6105e-14 16326000.0 1540.8 1545.8 1302.9 1477.1 1567.0 1561.0 1161.1 1274.6 1481.6 1451.8 1964.0 True False 1697.2208817229905 1676.0699909855716 1391.3226289741713 1568.3371122625047 1456.9393258565274 1548.2877335479002 1205.2862958782991 1249.1771030956431 1419.3335044027876 1360.1331002342622 1722.440450821776 0.9853582345405594 0.9730786281673303 0.8077623980035835 0.9105319789222619 0.8458575883778287 0.8988918791411409 0.6997549873513812 0.7252367433078228 0.8240247166313494 0.7896546435526075 1.0 10.750238390790967 -4.292365462416585 16.58036217304892 0.8857790649422269 0.8725072804249684 0.0 0.1011214042726317 0.0 0.0 0.014687436888792902 0.0 5.1007558647721935e-05 4.292365462416585 -0.013271784517258522 HTPSPGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPR ddPTM_A549_MK2206_60min_R1 1 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPR 40 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPR 96.055 5.238e-10 7242700.0 620.33 765.6 790.22 567.71 880.66 677.69 732.98 785.37 1196.4 1056.9 1139.0 True False 725.0265383876103 804.5657698580048 902.2850784490868 706.7989754854705 751.1160806032473 749.4027059857855 866.1529781532014 896.6986025947518 925.417310258213 818.1455559510712 856.1548651991964 0.8468404115404085 0.9397432667404295 1.0538806880915845 0.8255503813799199 0.8773133356294012 0.8753120918274832 1.0116779257590025 1.0473556117515286 1.0808994352241423 0.9556046332350376 1.0 9.741727971268856 -7.871084325501746 4.986365610385982 1.0394549099005288 0.9071943965704029 0.43660705792276056 0.06419535228776034 0.1346244765461079 5.40523910590868 0.009911551356523282 0.013833679543292855 1.3455990582369646e-08 7.871084325501746 -0.1322605133301259 HTPSPGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPR ddPTM_A549_PD325901_60min_R1 3 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPR 40 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPR;HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPR;HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPR 144.88 3.3820999999999995e-40 71073000.0 6512.8 7628.0 7707.799999999999 7183.299999999999 8185.8 7417.8 6439.3 7542.5 7064.8 7050.9 7991.6 True False 7173.974661530045 8270.838330468323 8230.897658766693 7626.996126542039 7610.857647476936 7357.391896163748 6684.351085220162 7392.0589205232145 6767.891024503785 6605.704970685874 7008.683862926329 1.0235837144086424 1.1800843770709053 1.174385636411064 1.0882208807970897 1.0859182403326695 1.04975371126125 0.9537241536286458 1.0547000071760713 0.9656436439234675 0.9425029149378412 1.0 12.774927835502648 -7.27409964249494 1.3744216961919546 0.9870539556723583 1.1273133963071504 0.6055688323976602 0.04872682879728392 0.18882695832015942 0.6990449997108855 0.007177039564353968 0.01433722825777698 5.319861888403742e-08 7.27409964249494 0.14025944063479212 HTRDS(ph)EAQR ddPTM_A549_MK2206_60min_R1 2 HTRDSEAQR 9 1 F8VSL7;P27105-2;P27105 F8VSL7 STOM Erythrocyte band 7 integral membrane protein 1 HT(0.021)RDS(0.979)EAQR;HTRDS(1)EAQR 151.13 7.063800000000001e-20 47670000.0 4657.0 4734.4 3704.1 2290.2 4351.1 4504.6 4020.3 5375.3 3806.0 7578.5 6515.9 True False 5442.987747281452 4975.360737742606 4229.397078134269 2851.2991028109836 3711.058953867317 4981.2737820885195 4750.736470393896 6137.265236165848 2943.9470769330974 5866.511586503165 4897.822200308554 1.111307745499327 1.0158312274849763 0.8635260540629311 0.582156514916233 0.7576957272220962 1.01703850780347 0.9699691569233787 1.2530600305946613 0.6010726720025962 1.1977796144036394 1.0 12.257924687108494 HTRDS(ph)EAQR ddPTM_A549_PD325901_60min_R1 3 HTRDSEAQR 9 1 F8VSL7;P27105-2;P27105 F8VSL7 STOM Erythrocyte band 7 integral membrane protein 1 HT(0.019)RDS(0.981)EAQR;HTRDS(1)EAQR;HT(0.151)RDS(0.849)EAQR 147.58 4.5478e-15 88312000.0 796.76 1241.1 962.42 1109.7 907.44 720.4 620.01 753.15 766.24 1146.3 1268.1 True False 877.646488656289 1345.691852640828 1027.7356087016062 1178.2436486884446 843.704544898052 714.5333012478586 643.6048198324904 738.1278324152553 734.037597471377 1073.922422371218 1112.1317391482153 0.7891569476548532 1.2100111931626887 0.9241131895837733 1.0594461134531281 0.7586372326216025 0.6424898023278444 0.5787127524347332 0.6637053924749863 0.6600275593551339 0.9656431738867 1.0 10.119111979340861 -6.766072924758049 24.989678468903172 0.7826161354874935 1.0058790622404168 0.34722385013206136 0.15664170343560857 124.85035932082047 673349.0494672107 0.02633016177785177 0.05095786244034636 1.7136695317390303e-07 6.766072924758049 0.22326292675292325 HTRDS(ph)EAQRLPDSFK ddPTM_A549_MK2206_60min_R1 2 HTRDSEAQRLPDSFK 15 2 F8VSL7;P27105-2;P27105 F8VSL7 STOM Erythrocyte band 7 integral membrane protein 1 HT(0.02)RDS(0.98)EAQRLPDSFK;HT(0.371)RDS(0.629)EAQRLPDSFK 94.384 4.5637e-06 18430200.0 3100.1 3747.8 3577.1 3550.3 5347.4 4494.700000000001 4282.200000000001 4886.9 6883.4 6416.4 5607.4 True False 3623.3210898319144 3938.5470118519183 4084.386568449583 4420.123659379025 4560.804543657946 4970.32617065961 5060.220310305381 5579.633040503578 5324.320890531076 4966.9307836166645 4214.927823632992 0.8596401270541446 0.9344281033161674 0.969028827860001 1.048683119695551 1.082059938982972 1.1792197585901991 1.2005473218148257 1.3237790239772835 1.2632057091648747 1.1784141962686079 1.0 12.041292211350608 -6.311328737113863 1.1469621467227809 1.1524945299997256 0.8820115648435755 0.6619823381759329 0.0811312304379776 0.4095982820972342 0.949875198916967 0.01785664835394654 0.08344449692379022 4.882826162510416e-07 6.311328737113863 -0.2704829651561501 HTRDS(ph)EAQRLPDSFK ddPTM_A549_PD325901_60min_R1 2 HTRDSEAQRLPDSFK 15 2 F8VSL7;P27105-2;P27105 F8VSL7 STOM Erythrocyte band 7 integral membrane protein 1 HT(0.005)RDS(0.995)EAQRLPDSFK;HT(0.033)RDS(0.967)EAQRLPDSFK 99.86 1.7633000000000001e-06 34759000.0 3552.1 4501.4 4880.5 4848.1 5499.2 4863.1 4938.6 5562.8 4970.6 5489.4 5459.5 True False 3912.706577082187 4880.748775664674 5211.720078830646 5147.556126166035 5112.955163210092 4823.496525955665 5126.541125505613 5451.845590067821 4761.702967727116 5142.798347173134 4788.016110621941 0.8171874293409477 1.0193676593604208 1.0884925945150314 1.0750916469864158 1.0678650708520574 1.0074102539577952 1.0707025638724719 1.138643952758056 0.9945043746121799 1.0740979621526605 1.0 12.225212291303418 -2.9545661950256674 16.674835159736926 1.0179781443075953 0.37876418609007156 0.0 0.08119406316775094 0.0 0.0 0.010148079326717045 0.0 0.0011102832934125181 2.9545661950256674 -0.6392139582175237 HTRDS(ph)EAQRLPDSFKDSPSK ddPTM_A549_MK2206_60min_R1 2 HTRDSEAQRLPDSFKDSPSK 20 3 F8VSL7;P27105-2;P27105 F8VSL7 STOM Erythrocyte band 7 integral membrane protein 1 HT(0.006)RDS(0.994)EAQRLPDSFKDSPSK;HT(0.046)RDS(0.954)EAQRLPDSFKDSPSK 109.26 1.125e-10 28361000.0 2173.74 3280.9 2470.4 2759.2 4569.4 2661.9 3576.1 2738.1 6319.7 5222.8 4148.799999999999 True False 2540.6141691594553 3447.8837961430627 2820.739867126401 3435.2041238651927 3897.2473130475755 2943.5804911737846 4225.831080211828 3126.234060079568 4888.298040487147 4042.965852607869 3118.538458945063 0.8146810445361293 1.1056088746487385 0.9045070003980642 1.1015429724818115 1.249703142787578 0.943897447450283 1.3550678100796418 1.0024676947986422 1.5674964746597213 1.2964296916112172 1.0 11.606654335526677 -6.5250343146711955 0.6951079053100196 1.2512774192007816 0.8971869721617233 0.2810127105481761 0.18129389627551143 1.1816182091992364 0.8911049955471758 0.04105302719299717 0.2372721510440431 2.985146745840537e-07 6.5250343146711955 -0.35409044703905834 HTRDS(ph)EAQRLPDSFKDSPSK ddPTM_A549_PD325901_60min_R1 2 HTRDSEAQRLPDSFKDSPSK 20 3 F8VSL7;P27105-2;P27105 F8VSL7 STOM Erythrocyte band 7 integral membrane protein 1 HT(0.076)RDS(0.924)EAQRLPDSFKDSPSK;HT(0.061)RDS(0.939)EAQRLPDSFKDSPSK 91.541 6.0262e-07 31518000.0 4338.9 6096.5 5807.1 6602.9 7007.1 6587.299999999999 5969.7 6761.2 7378.6 7562.4 7035.9 True False 4779.3819338706435 6610.273450668608 6201.20472692909 7010.7461367260785 6514.945469182689 6533.655212812355 6196.880200245188 6626.342561941209 7068.503101772681 7084.908773392744 6170.528904244879 0.7745498008416707 1.0712652923675985 1.004971344136012 1.1361661610406184 1.0558163765671489 1.0588484900083153 1.0042705084781598 1.0738694631805004 1.145526293039493 1.1481850070451556 1.0 12.591178439324967 -5.2607013535109335 24.805153366726014 1.0651412295705491 0.7745497005018822 0.7235458402813616 0.052407361266996105 24.2111242764306 813559.6441282509 0.007839713290709049 0.06526574981128938 5.486541221478533e-06 5.2607013535109335 -0.2905915290686669 HTVLYIS(ph)PPPEDLLDNSR ddPTM_A549_MK2206_60min_R1 2 HTVLYISPPPEDLLDNSR 18 0 O94916-2;O94916;O94916-4;O94916-5 O94916-2 NFAT5 Nuclear factor of activated T-cells 5 1 HT(0.002)VLY(0.12)IS(0.877)PPPEDLLDNS(0.001)R;HT(0.003)VLY(0.084)IS(0.913)PPPEDLLDNSR 57.745 0.0020418 5153300.0 514.56 670.5799999999999 974.2 745.66 892.64 611.55 714.41 1005.8799999999999 1052.54 849.74 1038.71 True False 601.4051482158344 704.7096577212395 1112.3562089356133 928.3467334739491 761.3338384730574 676.2638150859643 844.2090495271751 1148.4665703783048 814.1413705609989 657.7831438299394 780.7696400623859 0.7702721998357676 0.9025833249163365 1.4246919345464466 1.1890148974027364 0.9751068681566877 0.8661502450734749 1.0812524030259685 1.4709416343167991 1.0427420954738282 0.8424804322275908 1.0 9.60875314510508 -8.986818790766483 24.838669984345383 1.0188566454311643 1.0935163058675395 0.04466241474291244 0.2130983506186048 237.92467635353975 448356.059799967 0.037865154507286954 0.038073687991664634 1.030816138426645e-09 8.986818790766483 0.07465966043637517 HTVLYIS(ph)PPPEDLLDNSR ddPTM_A549_PD325901_60min_R1 2 HTVLYISPPPEDLLDNSR 18 0 O94916-2;O94916;O94916-4;O94916-5 O94916-2 NFAT5 Nuclear factor of activated T-cells 5 1 HT(0.001)VLY(0.027)IS(0.972)PPPEDLLDNSR;HTVLY(0.024)IS(0.975)PPPEDLLDNSR 62.203 0.00089815 6589000.0 2050.76 1616.13 1880.69 1811.0900000000001 1767.95 2288.0 1622.19 2212.8 1878.97 1921.52 1978.65 True False 2258.9516455102807 1752.3269469087284 2008.3249329076941 1922.95691601618 1643.775291096393 2269.3672865839817 1683.923328146428 2168.6639680919807 1800.0034251941852 1800.194899271346 1735.2885936957784 1.301772888796103 1.009818743276968 1.1573434760096066 1.1081481910283926 0.9472633526596965 1.3077751417421206 0.9703995832532075 1.249742536181379 1.0372934114437868 1.0374037527886537 1.0 10.760959900243872 -8.97492607526855 24.5439665314954 1.0164528657444556 1.1232680248639069 0.13934298436536885 0.11724845082080979 178.68148936541394 174906.96966086363 0.01823437584763639 0.018922856538227548 1.0594340445579756e-09 8.97492607526855 0.10681515911945128 HVAEDLGK ddPTM_A549_PD325901_60min_R1 1 HVAEDLGK 8 0 A0A2R8Y4F5;H0YFD6;P40939 A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase 0 87.616 0.0029086 2187900.0 518.09 664.95 635.77 768.04 800.28 728.74 866.46 789.77 949.52 822.99 710.76 False True 570.6861154023005 720.9876701422279 678.9171753955864 815.4800864546027 744.0710936161208 722.8053830529769 899.4336094451052 774.0174177874206 909.6149764447454 771.0262709476481 623.3410258788628 0.9155279240567827 1.1566504372557396 1.0891584978517426 1.308240678214367 1.1936822104193094 1.1595665182375525 1.442923812333663 1.2417238488291635 1.4592573546113998 1.236925276754503 1.0 9.283877858217705 -4.454834348954483 0.8604950682448985 1.2374670004555628 6.30312698406535e-07 0.37014682786047426 0.12612379344819133 9.000457156073182 1.798023389585747 0.026659340577892866 14.709449760273767 3.508856852242806e-05 4.454834348954483 -1.2374663701428643 HVDSLS(ph)QRSPK ddPTM_A549_MK2206_60min_R1 1 HVDSLSQRSPK 11 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 HVDS(0.001)LS(0.887)QRS(0.112)PK 113.53 1.1304e-05 22190000.0 2266.6 3128.8 2946.2 3470.3 3069.0 2216.2 2569.8 2483.6 4440.9 4917.6 4088.1 True False 2649.146666950425 3288.0425558146867 3364.0154616773802 4320.523655787686 2617.5541654797175 2450.7168130055 3036.69939597001 2835.6579057060067 3435.043240660062 3806.710744578472 3072.911944179837 0.8620965114109329 1.0700087134101945 1.0947321377200214 1.4060030792521905 0.8518155459799044 0.7975226291945046 0.9882155594212797 0.9227917874694734 1.1178462979279669 1.2387959088084075 1.0 11.585390711041313 -5.255006453317797 22.772470125870587 1.0402434774406306 0.8620962168034338 0.09478007895166496 0.16393462682508625 391.0125281272592 1384033.9577456343 0.02094021528761809 0.2589339849308586 5.558959969762176e-06 5.255006453317797 -0.17814726063719677 HVDSLS(ph)QRSPK ddPTM_A549_PD325901_60min_R1 1 HVDSLSQRSPK 11 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 HVDS(0.021)LS(0.895)QRS(0.084)PK 103.3 9.0542e-05 79046000.0 3603.7 5141.8 4837.7 5705.0 7099.7 7351.1 6331.4 7826.5 7207.5 6257.1 6226.8 True False 3969.544971096273 5575.117531148669 5166.015413453337 6057.384893004934 6601.041564635344 7291.235078849439 6572.3448916750185 7670.394317729521 6904.593839756409 5862.025638156637 5460.943074937396 0.7268973356111719 1.0209074613385494 0.9459932730598112 1.1092195633396849 1.2087731869849272 1.335160425369024 1.2035182937244522 1.404591516973001 1.2643592407041457 1.0734456590584107 1.0 12.414934402848818 -5.38291785167026 0.9331941394768346 1.173669432652272 0.5901587660949719 0.5828180637882256 0.1191333396203862 1.2613605052289378 0.9303691498267298 0.022490885857396517 0.7095011397077965 4.140779917220092e-06 5.38291785167026 -0.5835106665573002 HVDSLSQRS(ph)PK ddPTM_A549_MK2206_60min_R1 3 HVDSLSQRSPK 11 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 HVDSLSQRS(1)PK;HVDSLSQRS(1)PK;HVDS(0.002)LS(0.031)QRS(0.967)PK 137.84 7.0286e-09 114183000.0 8547.099999999999 13545.500000000002 11590.4 12261.5 10860.3 8535.7 8994.3 8560.3 14359.099999999999 18845.199999999997 17154.1 True False 9989.64152346774 14234.908092491652 13234.09300353864 15265.568050439657 9262.764256552417 9438.942108460908 10628.447885895032 9773.748739819268 11106.786776770892 14588.056231440174 12894.263540924972 0.7747353303088399 1.1039721692760212 1.0263550889537107 1.1839038345996593 0.718363187409147 0.7320264611082863 0.8242772339933575 0.7579920100747488 0.8613742647278129 1.1313601730831149 1.0 13.654441755142892 -6.759255277663714 24.999999847256497 0.8830194119949729 1.0283732900168776 0.2079167915268414 0.14742038601783625 75.5480882229949 864729.4884907865 0.020131546714628967 0.04034866965470836 1.7407833426935706e-07 6.759255277663714 0.1453538780219047 HVDSLSQRS(ph)PK ddPTM_A549_PD325901_60min_R1 4 HVDSLSQRSPK 11 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 HVDSLS(0.002)QRS(0.998)PK;HVDS(0.001)LS(0.132)QRS(0.867)PK;HVDS(0.03)LS(0.138)QRS(0.832)PK;HVDS(0.04)LS(0.384)QRS(0.576)PK 115.8 5.672e-06 264622500.0 8915.5 10752.5 9659.58 12113.57 14936.999999999998 14863.7 12860.9 16095.699999999999 13597.4 11037.8 11868.4 True False 9820.594996755792 11658.650910902026 10315.137186573282 12861.79770698646 13887.876649852558 14742.654955244021 13350.328587254517 15774.658636667624 13025.94856423223 10340.871424277266 10408.662039986339 0.9435021484056832 1.1200912150008981 0.9910147093782306 1.2356821325907263 1.334261463817379 1.4163832871706314 1.2826171640473436 1.51553183070668 1.2514527337126728 0.9934870960889454 1.0 13.345497011843602 -6.262584999664894 24.919749974324983 1.2040780474113804 1.0283915384535867 0.27115353679504184 0.15708849271454534 143.54564807973773 3122488.2471959926 0.026063990545775614 0.06386952890386768 5.462796221380805e-07 6.262584999664894 -0.1756865089577937 HVEVSQAPLPPAPAYLS(ph)SPLALPSQR ddPTM_A549_MK2206_60min_R1 2 HVEVSQAPLPPAPAYLSSPLALPSQR 26 0 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 HVEVSQAPLPPAPAY(0.003)LS(0.494)S(0.494)PLALPS(0.008)QR;HVEVSQAPLPPAPAY(0.017)LS(0.49)S(0.49)PLALPS(0.003)QR 65.244 0.00010747 5975100.0 1590.2 1779.4499999999998 1608.4499999999998 1419.89 2538.0 2089.56 1471.9 1972.8000000000002 2809.4 2888.8 2317.66 True False 1858.5868833427023 1870.0164043545271 1836.5523960813866 1767.7631137412845 2164.66356206827 2310.675852262329 1739.3251774177984 2252.4504414466155 2173.075385689921 2236.2180736412674 1742.121057838077 1.066852888885435 1.0734135816457926 1.0542048084537228 1.0147188714514643 1.2425448577922342 1.3263577992276911 0.9983951285086077 1.2929356609935265 1.247373353254019 1.2836180721082329 1.0 10.766629163176605 -6.737200310576497 24.998795451905877 1.1471367390527625 1.053942056756112 0.20779040567651774 0.11160500029286673 424.40849364687836 437708.6555696761 0.017910603138043144 0.037270166844443856 1.83146949492428e-07 6.737200310576497 -0.09319468229665051 HVEVSQAPLPPAPAYLS(ph)SPLALPSQR ddPTM_A549_PD325901_60min_R1 2 HVEVSQAPLPPAPAYLSSPLALPSQR 26 0 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 HVEVSQAPLPPAPAY(0.001)LS(0.556)S(0.442)PLALPSQR;HVEVSQAPLPPAPAY(0.003)LS(0.547)S(0.446)PLALPS(0.004)QR 80.342 1.1754e-06 11595500.0 1762.8600000000001 1689.03 2004.1999999999998 2119.3 2151.1400000000003 2137.17 2376.8999999999996 2534.9 2686.7 1811.6399999999999 2087.8 True False 1941.8242494510575 1831.3704857513007 2140.21706423366 2250.2043477204825 2000.0513474301288 2119.7655960964557 2467.3542301895864 2484.339430909419 2573.7873422509238 1697.2527412235838 1831.013835654637 1.06051861085845 1.000194782851838 1.1688699574836772 1.2289390194126926 1.0923190794541737 1.1577004798211052 1.3475344544884011 1.3568108457362915 1.4056624216226772 0.9269469777746218 1.0 10.83842697724732 -5.870533229225271 4.467368664073773 1.2104703995310737 1.03098067363336 0.14193353503774941 0.14213919229509125 0.29075342448873515 9.913017115970845 0.022328032430434287 0.07542428386337882 1.347307634691502e-06 5.870533229225271 -0.17948972589771373 HVIADQEVMETNRVES(ph)VEPSENEASK ddPTM_A549_MK2206_60min_R1 2 HVIADQEVMETNRVESVEPSENEASK 26 1 Q9H307 Q9H307 PNN Pinin 1 HVIADQEVMET(0.007)NRVES(0.993)VEPSENEASK;HVIADQEVMET(0.02)NRVES(0.977)VEPS(0.003)ENEASK 114.61 2.5574999999999998e-17 9396900.0 1709.4299999999998 2475.8999999999996 1817.12 2036.52 3571.1000000000004 3073.8 1869.17 2883.1000000000004 3936.6 3095.6 2969.9 True False 1997.9399924490706 2601.9127345760626 2074.814939828662 2535.4674914228567 3045.7959206075666 3399.067475776693 2208.773994071624 3291.788254123444 3044.9663854584414 2396.301810012429 2232.391864929847 0.8949772769897887 1.1655268841690694 0.9294134118759938 1.1357627355905697 1.364364370098294 1.5226123733807408 0.9894203740708556 1.474556642960571 1.3639927798044227 1.07342346460653 1.0 11.124374578840483 -6.517384443337532 23.754273082712963 1.2239157057033496 1.0167046046139534 0.26939564423288753 0.18184598295651477 169.02165271837603 730750.9665016275 0.028794571290897946 0.061500578775550034 3.038194384277117e-07 6.517384443337532 -0.20721110108939622 HVINFDLPSDIEEYVHR ddPTM_A549_PD325901_60min_R1 2 HVINFDLPSDIEEYVHR 17 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 ; 76.85 0.00041217 2242900.0 0.0 0.0 0.0 0.0 139.71 107.46 107.8 118.59 140.93 0.0 0.0 False True 0.0 0.0 0.0 0.0 129.89725157333473 106.58488138824944 111.90238799042345 116.22462941794475 135.0072021972765 0.0 0.0 0.0 HVLEDS(ph)PAGK ddPTM_A549_PD325901_60min_R1 1 HVLEDSPAGK 10 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;B7ZB24;H0YGQ3;F5H8D6;F8WDQ8 F5H1U9 MPDZ Multiple PDZ domain protein 1 HVLEDS(1)PAGK 95.01799999999999 0.00017401 4981100.0 1548.4 1715.6 1217.3 1721.5 2274.0 2139.2 1641.2 1731.9 1810.3 1621.5 1862.0 True False 1705.5924281281673 1860.1796328987243 1299.9132982195556 1827.833145189833 2114.2820848741194 2121.7790644494985 1703.6567640991009 1697.3558958507333 1734.219386487828 1519.1182132730783 1632.985804190504 1.0444624954799626 1.1391278651199566 0.7960346592626643 1.1193196784070745 1.2947339036558259 1.2993248679839546 1.0432771428430325 1.039418647421824 1.061992934682924 0.9302703118268246 1.0 10.67329653403507 -9.103533552672328 0.960488630574773 1.0169987032611871 1.103828719288413 0.11155159292721706 0.13090139953899257 1.058727920967162 2.0393231625322867 0.03437790681329761 0.03031077584452201 7.878915582659643e-10 9.103533552672328 0.08683001602722595 HVLHVQLNRPNK ddPTM_A549_MK2206_60min_R1 2 HVLHVQLNRPNK 12 1 Q13011;M0R248;M0QZW4;M0QYT0 Q13011;M0QYT0 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial 0 ; 93.05799999999999 0.00060481 3061400.0 786.06 671.8499999999999 414.72 704.1 887.23 835.15 588.6700000000001 440.35 864.5899999999999 995.1399999999999 797.0899999999999 False True 918.7277106781308 706.0442952966309 473.53353209790384 876.6045316082498 756.7196423064739 923.5250186722969 695.6237191320979 502.7709610153165 668.7617454665225 770.337182845254 599.1505544351427 1.5333837278082365 1.1784088157312376 0.7903414735956208 1.463078895812223 1.262987469017502 1.5413905767690772 1.1610165658411291 0.8391396073885147 1.1161831371365527 1.2857155470239026 1.0 9.226774758473546 -8.000621232216016 24.99970579440176 1.0383064581063977 1.279416530855963 0.19880529184482676 0.21845310292570091 25.909396470152537 1042705.4370101766 0.03180901866888952 0.04367047800591185 9.985705825518244e-09 8.000621232216016 0.24111007274956542 HVLQT(ph)AVADSPR ddPTM_A549_MK2206_60min_R1 1 HVLQTAVADSPR 12 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 HVLQT(0.901)AVADS(0.099)PR 56.482 0.014481 4658100.0 1742.6 1692.1 1665.1 1547.8 2693.9 2170.7 2156.4 2063.9 3114.2 2880.4 2345.0 True False 2036.7082775204315 1778.2206624565426 1901.2362179210527 1927.011069483383 2297.6308785877522 2400.402033205956 2548.1899671062843 2356.4641454286634 2408.838672355504 2229.7156394753183 1762.6717812924644 1.1554665475083694 1.008821200480487 1.0786104583389808 1.0932330624084865 1.3034933122393515 1.3617975046073982 1.4456406428869277 1.336870636064081 1.3665837837315595 1.264963598521103 1.0 10.783548146963485 -6.672469377639584 7.106350008737816 1.23231767835248 1.0763486571638452 0.34663140106824475 0.12146186847203662 0.344127629526263 23.375010762126823 0.02481575253997756 0.051817270831677614 2.1258402341831116e-07 6.672469377639584 -0.15596902118863487 HVLS(ph)DLEDDEVR ddPTM_A549_MK2206_60min_R1 2 HVLSDLEDDEVR 12 0 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6-4;Q8N4C6-9;Q8N4C6-2;Q8N4C6;Q8N4C6-5;Q8N4C6-10;Q8N4C6-7 H0YDJ4 NIN Ninein 1 HVLS(1)DLEDDEVR;HVLS(1)DLEDDEVR 104.87 0.00017183 3284400.0 595.69 651.88 779.8 846.8299999999999 977.61 819.37 536.26 1209.3400000000001 937.1200000000001 664.99 703.7 True False 696.2279087777722 685.0579075953972 890.3873657647214 1054.3033880156438 833.8048640321357 906.0751895462129 633.6915005381263 1380.7676484484232 724.8638162731329 514.7682971443872 528.9518688680198 1.3162405688588084 1.2951233333600864 1.6833050758856176 1.9931934266002298 1.576334092204863 1.7129633958667232 1.1980135392928168 2.610384289601484 1.3703776448023017 0.9731855154345403 1.0 9.046992642351173 -9.286891289038216 2.3692042332854206 1.1247550184903001 1.661895621679585 0.3022553321429251 0.37924788565789336 0.24611171783184577 2.830802156098793 0.07528017115284973 0.06837025769382639 5.165456528561418e-10 9.286891289038216 0.5371406031892849 HVLS(ph)DLEDDEVR ddPTM_A549_PD325901_60min_R1 2 HVLSDLEDDEVR 12 0 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6-4;Q8N4C6-9;Q8N4C6-2;Q8N4C6;Q8N4C6-5;Q8N4C6-10;Q8N4C6-7 H0YDJ4 NIN Ninein 1 HVLS(1)DLEDDEVR;HVLS(1)DLEDDEVR 137.59 2.1295000000000003e-08 4677900.0 528.0799999999999 540.47 570.54 595.78 708.23 514.71 614.5799999999999 723.69 738.01 529.31 434.17 True False 581.6902928480511 586.0173036796301 609.2602753357309 632.5799774854478 658.4863680608604 510.5183724115567 637.9681782110798 709.2554352261777 706.9940061989073 495.8892762673902 380.7698424303927 1.5276690221452818 1.539032870721 1.600074920447797 1.6613184842785642 1.729355360334862 1.3407531677220024 1.6754692917354785 1.8626880498180063 1.856748952822204 1.3023333809794615 1.0 8.572775409231951 -10.867789170322643 1.1113537751573994 0.9993673105942522 1.6554834619878394 0.5510811248715465 0.1644587298109707 0.22017744942986517 0.4820873105088035 0.11140544320793133 0.026884165334791467 1.355847453196888e-11 10.867789170322643 0.6561161513935871 HVLS(ph)DLEDDEVRDLGSTGTSSVQR ddPTM_A549_PD325901_60min_R1 3 HVLSDLEDDEVRDLGSTGTSSVQR 24 1 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6-4;Q8N4C6-9;Q8N4C6-2;Q8N4C6;Q8N4C6-5;Q8N4C6-10;Q8N4C6-7 H0YDJ4 NIN Ninein 1 HVLS(0.996)DLEDDEVRDLGS(0.001)T(0.001)GT(0.001)SSVQR;HVLS(1)DLEDDEVRDLGSTGTSSVQR;HVLS(1)DLEDDEVRDLGSTGTSSVQR 94.721 4.2912e-08 6574700.0 1461.91 1394.89 1583.83 1955.32 1465.0200000000002 2105.51 1591.68 1686.14 1491.0500000000002 1954.1100000000001 1931.61 True False 1610.3220269987394 1512.442275666881 1691.3182281434963 2076.0956755460843 1362.1220492446278 2088.363424639616 1652.2522534007153 1652.5086149487597 1428.3863537660477 1830.727161109502 1694.03421548465 0.9505841217841274 0.8928050341853236 0.9983967340704646 1.22553349664908 0.8040699749709218 1.2327752329619572 0.9753358216132717 0.9754871535909266 0.8431862477803599 1.08069078202517 1.0 10.72624729865423 -8.369609347645131 3.3037610114047293 0.9257926613299691 1.0153122412139692 0.0 0.13284409358575078 0.4744203486620408 9.809588567410058 0.02080714404537487 0.025458622600528814 4.269634040962756e-09 8.369609347645131 0.08951957988400017 HVS(ph)FQDEDEIVR ddPTM_A549_MK2206_60min_R1 3 HVSFQDEDEIVR 12 0 Q7Z699 Q7Z699 SPRED1 Sprouty-related, EVH1 domain-containing protein 1 1 HVS(1)FQDEDEIVR;HVS(1)FQDEDEIVR;HVS(1)FQDEDEIVR 61.11 0.008334399999999999 2906260.0 839.06 1148.11 1231.4 515.19 1274.6000000000001 915.26 795.92 1227.98 1147.26 1146.3 1207.57 True False 980.672814952539 1206.5438950256964 1406.0310364230295 641.4115731277582 1087.1080284524098 1012.1122056995829 940.5283614446448 1402.049925531029 887.407441797758 887.3500338600744 907.6970417634719 1.0803966189504044 1.3292363415458812 1.5490091646562991 0.7066361832375537 1.1976551409051401 1.1150330552287064 1.0361699093095955 1.5446232179044335 0.9776471674664761 0.977583921763293 1.0 9.826067045354911 HVS(ph)FQDEDEIVR ddPTM_A549_PD325901_60min_R1 1 HVSFQDEDEIVR 12 0 Q7Z699 Q7Z699 SPRED1 Sprouty-related, EVH1 domain-containing protein 1 1 HVS(1)FQDEDEIVR 63.894 0.0020783 2023300.0 165.07 158.71 0.0 153.34 111.53 90.794 98.76100000000001 191.81 192.65 0.0 170.98 True False 181.82778488188868 172.0850486927934 0.0 162.81146353959272 103.69651755761234 90.05460376665475 102.51940389909288 187.98419907796588 184.55359045842135 0.0 149.9505439315211 1.2125850304679464 1.1476120338141662 0.0 1.0857677422893837 0.6915381220955631 0.6005620346917886 0.6836881095003635 1.2536413283289847 1.2307630610710065 0.0 1.0 7.228342945231693 -8.256185895711766 24.532006844063805 1.1228664780707818 0.7611822683239952 0.0 0.46506795137638124 385.4039362626749 1799707.1467432997 0.050459377979156665 0.06413825076427308 5.54388361384092e-09 8.256185895711766 -0.3616842097467866 HVS(ph)PVTPPR ddPTM_A549_MK2206_60min_R1 2 HVSPVTPPR 9 0 Q13443 Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 1 HVS(1)PVTPPR;HVS(1)PVTPPR 119.34 4.7319e-05 217300000.0 1699.5 2153.0 2252.5 2061.33 2589.3 2172.76 2035.7600000000002 2144.55 3284.7 2938.7 2735.8 True False 1986.334051214262 2262.578503793474 2571.938370588658 2566.3559425366207 2208.41740002497 2402.6800210386386 2405.6312406957386 2448.5465299089287 2540.720694588058 2274.845628984211 2056.4253557611605 0.9659159500486926 1.1002483009921886 1.2506840393614418 1.2479694122360767 1.0739108005248026 1.1683769674923679 1.1698120887083323 1.1906809663911333 1.2355034854390041 1.106213567446607 1.0 11.00592299042811 -10.953407020728468 1.2229242177474984 1.0002227896973017 1.166204432003514 0.13007243537483348 0.08631235599607506 0.42286199295602617 1.1267210202878533 0.05836189405897852 0.013668498492052716 1.1132507061226036e-11 10.953407020728468 0.16598164230621237 HVS(ph)PVTPPR ddPTM_A549_PD325901_60min_R1 4 HVSPVTPPR 9 0 Q13443 Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 1 HVS(0.998)PVT(0.002)PPR;HVS(0.841)PVT(0.159)PPR;HVS(0.999)PVT(0.001)PPR;HVS(0.84)PVT(0.16)PPR 110.84 0.00010608 397741000.0 21717.84 22976.08 21967.699999999997 22930.050000000003 28901.6 24606.699999999997 23286.36 24645.82 25878.6 25303.0 25897.03 True False 23922.619128971208 24912.354896159777 23458.560224511413 24346.387110578064 26871.651321107227 24406.31119352538 24172.535172585118 24154.23978582824 24791.012437255642 23705.364261763007 22711.859484798904 1.053309577975448 1.0968875055269547 1.032877129246607 1.0719680230001931 1.1831550533804809 1.0746064720002595 1.0643133464595378 1.0635078031367147 1.091544814014384 1.0437438765253482 1.0 14.471158207993021 -10.80623271617356 0.7010701190214739 0.990157878245408 1.0832817375987702 0.2324476289770676 0.03858248517232314 0.7674994636790143 0.5512434864586052 0.04348280295435362 0.0072376565065680725 1.562310256240997e-11 10.80623271617356 0.0931238593533622 HVSPVT(ph)PPR ddPTM_A549_MK2206_60min_R1 1 HVSPVTPPR 9 0 Q13443 Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 1 HVS(0.122)PVT(0.878)PPR 53.568999999999996 0.012197 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 HVTLPSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 HVTLPSSPR 9 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HVTLPS(0.251)S(0.749)PR;HVTLPS(0.17)S(0.83)PR 94.465 0.00029122 47164000.0 1294.8 1736.71 1812.31 1253.65 2073.3 1476.83 1186.75 1465.28 2485.5 2165.9 2170.3 True False 1513.3305851793043 1825.1011209118274 2069.322809501234 1560.7943062784873 1768.3203164839033 1633.1071703595865 1402.3671134591823 1672.9879272318 1922.5382185279068 1676.6216857171214 1631.3546127671784 0.9276527453539507 1.1187641893604034 1.2684690338363367 0.9567474135074755 1.0839582655081947 1.0010742959125456 0.8596335232598037 1.025520701715491 1.1784919130898275 1.0277481502768788 1.0 10.671854704034239 -3.9585898547477982 10.515096670198993 1.0625390599867088 1.0555134264842174 0.0 0.11293559326181384 0.0 0.0 0.015510334531704355 0.0 0.00011000442245763066 3.9585898547477982 -0.007025633502491413 HVTLPSS(ph)PR ddPTM_A549_PD325901_60min_R1 3 HVTLPSSPR 9 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HVTLPS(0.036)S(0.964)PR;HVTLPS(0.056)S(0.943)PR;HVTLPS(0.003)S(0.996)PR 128.6 5.1039e-05 83623000.0 5274.030000000001 6578.429999999999 5849.2 7106.599999999999 9224.400000000001 8087.1 6809.5 8263.2 8036.799999999999 6787.99 7015.55 True False 5809.4456430643195 7132.817383102092 6246.161886096956 7545.558541740379 8576.509966452431 8021.241338869456 7068.639248801375 8098.383993645 7699.041244724841 6359.39515295438 6152.681825235598 0.9442135654141135 1.159302168665119 1.0151933845299692 1.226385299300187 1.3939466089852648 1.3036983817316616 1.148871248275658 1.3162364353750566 1.2513309583386476 1.0335972724724583 1.0 12.586999672776587 -4.540417708288655 1.1357418991641277 1.1706204812427103 0.21365820776772498 0.23481637237907727 0.1241781905436581 10.207234544040546 3.258029827092493 0.021422695014149718 17.373033338698733 2.8812589495675647e-05 4.540417708288655 -0.9569622734749854 HVVFGK ddPTM_A549_MK2206_60min_R1 2 HVVFGK 6 0 P62937;P62937-2;O43447;C9JQD4;H0YEL5;O43447-2;P45877;P23284 P62937;P23284 PPIA;PPIH;PPIC;PPIB Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase H;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase C;Peptidyl-prolyl cis-trans isomerase B 0 ; 72.054 0.052351 65339000.0 3537.4 5368.2 4874.7 4529.0 6798.6 5238.5 5397.4 4956.4 7492.3 7533.0 4978.1 False True 4134.426638873395 5641.418450563927 5566.005760314554 5638.605203314535 5798.534946050963 5792.834592965128 6378.037714922766 5658.984878338398 5795.306012744572 5831.290068104281 3741.9003814294288 1.1049002425056593 1.507634590851633 1.487481010434678 1.5068827677236436 1.5496230137040388 1.5480996291922207 1.7044915857664593 1.5123291112781123 1.5487601010187049 1.558376619817092 1.0 11.869555435669751 -10.654040284790385 0.850417457157241 0.9892682180986551 1.5077323545784402 0.0 0.21235661799639208 0.31062414584780046 0.387329753493339 0.10290084187708191 0.02536684809357164 2.2179906713111248e-11 10.654040284790385 0.5184641364797852 HVVFGK ddPTM_A549_PD325901_60min_R1 1 HVVFGK 6 0 P62937;P62937-2;O43447;C9JQD4;H0YEL5;O43447-2;P45877;P23284 P62937;P23284 PPIA;PPIH;PPIC;PPIB Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase H;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase C;Peptidyl-prolyl cis-trans isomerase B 0 72.054 0.052351 54017000.0 1425.8 1507.4 1879.4 1860.0 2665.4 1703.2 2315.7 2234.1 2320.4 1879.1 1320.1 False True 1570.546166381516 1634.4338882207596 2006.9473857502946 1974.887975633511 2478.1914991308167 1689.3297038941598 2403.8252306996633 2189.539122882454 2222.881657408363 1760.4533053107873 1157.7360688033743 1.356566672406448 1.4117499940293783 1.7335102877330733 1.7058188207565628 2.140549617403087 1.459166514212722 2.0763154016478347 1.891224763469227 1.9200245352171792 1.5205998610118248 1.0 10.17709068166119 -10.785347973250754 1.012851318558429 0.9963070020627856 1.757541648707932 0.23452167342389352 0.28676507125988654 0.3260066093300785 0.5891725673233876 0.17839998840733903 0.04402544651459998 1.6392757967723455e-11 10.785347973250754 0.7612346466451465 HVVLGAIENKVES(ph)K ddPTM_A549_MK2206_60min_R1 2 HVVLGAIENKVESK 14 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 HVVLGAIENKVES(1)K;HVVLGAIENKVES(1)K 94.544 2.2511999999999997e-05 7945600.0 1783.3600000000001 1943.0 2494.0 1871.04 3637.7 3419.0 3011.5 2834.2 4316.6 2547.9 2937.7 True False 2084.3475690341083 2041.890400775997 2847.6867019969427 2329.444883994178 3102.5991488320524 3780.79631065148 3558.6505685126012 3235.956529373476 3338.8969921937482 1972.3276204065994 2208.1880136046366 0.9439176176088504 0.9246904648498766 1.289603369120907 1.0549123850154418 1.4050430170424586 1.7121713764217588 1.6115704580351722 1.465435238954637 1.5120528558360151 0.893188264882835 1.0 11.108647298602094 -5.872760662691448 1.3273367166089152 1.330075153989158 0.8880796334066303 0.274385095375449 0.24528314192339376 0.6861589420972966 1.930283727242913 0.04020075784141557 0.30162270772008765 1.3404151793761752e-06 5.872760662691448 -0.44199552058252767 HVVLGAIENKVES(ph)K ddPTM_A549_PD325901_60min_R1 1 HVVLGAIENKVESK 14 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 HVVLGAIENKVES(1)K 100.41 1.3318e-05 5294700.0 1228.1 1238.8 1345.3 1218.0 1773.2 1439.3 1092.5 1258.6 1887.0 1485.4 1165.5 True False 1352.7758079205635 1343.198023568978 1436.6001479460845 1293.2330937212987 1648.6565492079098 1427.578817998395 1134.0756853389391 1233.4962356474011 1807.6959522192642 1391.6115905000493 1022.1508887132289 1.323459992901394 1.314089767372712 1.4054677873974162 1.2652076205200302 1.6129287440950915 1.3966419574271989 1.109499290037903 1.206765311528743 1.7685216264840768 1.3614541706772167 1.0 9.997392465605142 HVVS(ph)PEQIATSDK ddPTM_A549_MK2206_60min_R1 2 HVVSPEQIATSDK 13 0 Q9H582;Q9H582-2;A0A087WZL9 Q9H582 ZNF644 Zinc finger protein 644 1 HVVS(1)PEQIATSDK;HVVS(1)PEQIATSDK 87.566 5.9538000000000005e-05 11138300.0 1497.12 2091.6000000000004 1981.87 1788.0100000000002 2605.4 2163.32 1827.5700000000002 2022.79 2899.3999999999996 2932.3 2727.6 True False 1749.7972549302142 2198.0535060540797 2262.9289671558463 2226.0725302668184 2222.14911135251 2392.2410865044035 2159.6158125507473 2309.5266770345693 2242.69052939039 2269.891393429205 2050.261642069647 0.8534507104000015 1.072084392036542 1.1037269198830257 1.085750464521054 1.0838368458717054 1.1667979527186312 1.0533366904190393 1.1264546093264496 1.093855771074415 1.1071227919661275 1.0 11.001592314212386 -5.260843096954264 24.13101802197194 1.0685198618677116 0.8534506079144437 0.6790843845516228 0.04457512553617903 16.837783854171885 681129.5595522433 0.0073440588479986345 0.060571132932592295 5.484750836422927e-06 5.260843096954264 -0.21506925395326792 HVVS(ph)PEQIATSDK ddPTM_A549_PD325901_60min_R1 2 HVVSPEQIATSDK 13 0 Q9H582;Q9H582-2;A0A087WZL9 Q9H582 ZNF644 Zinc finger protein 644 1 HVVS(1)PEQIATSDK;HVVS(1)PEQIATSDK 87.51899999999999 5.9582e-05 19366800.0 1496.95 1495.6399999999999 1669.85 1913.53 2016.9 1930.5500000000002 1941.88 1927.15 2115.5 2063.51 1885.44 True False 1648.9192620036551 1621.682831749036 1783.1760626237774 2031.7244021580586 1875.23990192727 1914.8282408718135 2015.7793060375086 1888.711481430071 2026.5928918494176 1933.2196264391807 1653.5428327889063 0.9972038397230673 0.9807322795587131 1.0783972614826243 1.2287098718400309 1.1340739802696518 1.1580155064034336 1.2190668823725874 1.1422210806868083 1.2256065290013176 1.1691379189606868 1.0 10.6913447017374 -5.908983130714351 4.283940336247361 1.1320859865252846 0.9904043655308677 0.4804744596650914 0.06444145118887533 0.2111837065165441 7.065341165456409 0.01255470351918283 0.04216985859711274 1.2331527316078576e-06 5.908983130714351 -0.14168162099441683 HWGGNVLGPK ddPTM_A549_PD325901_60min_R1 1 HWGGNVLGPK 10 0 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 67.563 0.0048608 2234700.0 1968.0 1609.6 1840.8 1426.1 2304.9 2334.9 2186.2 1765.7 2202.9 2144.4 2288.5 False True 2167.7899112349724 1745.2466408916914 1965.7277576296385 1514.1869580919076 2143.011775473332 2315.885348533629 2269.3970373345433 1730.4817283351465 2110.3197737911055 2009.0022180344074 2007.02900799676 1.0800989435616926 0.869567222963879 0.9794216973434058 0.7544419896567595 1.0677532646188796 1.1538873326226322 1.1307245826006551 0.8622106214908978 1.051464510668653 1.0009831497351485 1.0 10.970845753076937 HWPFMVVNDAGRPK ddPTM_A549_MK2206_60min_R1 2 HWPFMVVNDAGRPK 14 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 88.101 0.00027698 2966200.0 890.73 1018.6299999999999 1201.94 1030.89 1605.9099999999999 1234.31 1222.6799999999998 1350.35 1832.2800000000002 1639.12 1663.53 False True 1041.0634477423243 1070.4739160794927 1372.3931654363284 1283.4580962784112 1369.682766336113 1364.9238649313322 1444.8251293737299 1541.7662477734364 1417.2715055499143 1268.8416535817196 1250.4295899076562 0.8325646291041517 0.8560849205100359 1.097537339577576 1.0264137274400185 1.0953697652318541 1.091563952059173 1.1554630033030726 1.2329892544267889 1.133427677166996 1.0147245905108684 1.0 10.288208108153839 -5.748378788037939 7.80804956315262 1.085088959029435 0.8427482664406186 0.6909603184564593 0.06421567674646654 0.07267409963195366 24.6889378316752 0.010427203278292756 0.03806678481771184 1.7849300945451828e-06 5.748378788037939 -0.2423406925888164 HWPFMVVNDAGRPK ddPTM_A549_PD325901_60min_R1 2 HWPFMVVNDAGRPK 14 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 102.62 9.6552e-05 4834800.0 1657.5900000000001 1596.17 1892.39 2153.7799999999997 2231.9 2296.7 2041.4 2302.4 2639.3 2332.2 2304.7 False True 1825.8673165467362 1730.6848476591026 2020.8189652655099 2286.814099010722 2075.1390436370034 2277.996436668457 2119.0865940969443 2256.4768258021427 2528.3793994129833 2184.944493984259 2021.2365106970203 0.9033417449584308 0.8562505369855399 0.9997934207949932 1.1313936231154453 1.0266680977979143 1.1270311141781688 1.0484110013262034 1.116384358713172 1.2509072471390672 1.0809939769150443 1.0 10.981022430153008 -5.996100431725052 2.945861350468924 1.1104078311515255 0.8793941868180788 0.6235212610242016 0.06485541387204594 0.1629746657379543 2.8554115327816945 0.013007059602166655 0.04525677100995298 1.00901952071403e-06 5.996100431725052 -0.23101364433344673 HWVAPGGPYSAET(ph)PGVPSPIAALK ddPTM_A549_MK2206_60min_R1 1 HWVAPGGPYSAETPGVPSPIAALK 24 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 HWVAPGGPY(0.031)S(0.049)AET(0.726)PGVPS(0.195)PIAALK 61.766999999999996 0.00036493 9889800.0 907.3 1287.0 1410.0 1034.4 1421.1 1658.6 1430.0 1357.6 1900.7 1758.1 1603.7 True False 1060.430058644719 1352.5028027785418 1609.959202011101 1287.82804643598 1212.0580725197874 1834.111951110426 1689.8124897801833 1550.0439574756301 1470.1944847942025 1360.9439889465202 1205.4570301316523 0.8796912972741182 1.1219834212015256 1.3355591794385833 1.0683317731328272 1.0054759665613415 1.5215075322179803 1.4018023434610796 1.2858558361937995 1.2196158370187922 1.1289858990642632 1.0 10.235364510035662 -4.440766021897894 16.571538940228816 1.1552087778600708 1.1346395958250517 0.0 0.18598267117825468 0.0 0.0 0.025890124594471247 0.0 3.6243821103968196e-05 4.440766021897894 -0.020569182035019118 HWVAPGGPYSAETPGVPS(ph)PIAALK ddPTM_A549_MK2206_60min_R1 1 HWVAPGGPYSAETPGVPSPIAALK 24 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 HWVAPGGPYSAET(0.061)PGVPS(0.939)PIAALK 95.319 4.2176e-08 10521000.0 2105.3 2638.4 3064.4 2788.5 4055.6 3407.6 3535.9 2977.4 5028.4 4503.5 4428.0 True False 2460.6231703568037 2772.6832904824437 3498.977999037462 3471.682625180522 3459.0266124208333 3768.1899702181845 4178.327260569054 3399.455567905084 3889.4754287047767 3486.1562221834115 3328.4053934170697 0.73927988916958 0.8330365333400388 1.0512475451330991 1.0430468091557676 1.0392443838908887 1.1321307127043245 1.2553540710013755 1.0213466107910225 1.1685702217636689 1.0473953170122672 1.0 11.700615446342297 -5.6520189175995466 1.7293867807146757 1.0896916403567698 0.7120886498931019 0.7306692932062393 0.07097064308646979 0.21111621447156964 1.0125167929544876 0.011623118131333219 0.10226369614507093 2.2283380821248977e-06 5.6520189175995466 -0.37760299046366785 HWVAPGGPYSAETPGVPS(ph)PIAALK ddPTM_A549_PD325901_60min_R1 2 HWVAPGGPYSAETPGVPSPIAALK 24 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 HWVAPGGPYSAET(0.001)PGVPS(0.999)PIAALK;HWVAPGGPY(0.008)S(0.061)AET(0.229)PGVPS(0.702)PIAALK 108.92 1.505e-11 38529000.0 3534.9 4123.1 4351.3 4458.1 5217.5 5903.2 4652.6 4830.0 5880.299999999999 5442.5 4985.0 True False 3893.760445744159 4470.568107020711 4646.605384492529 4733.466711920295 4851.040799397852 5855.126296399722 4829.657239000408 4733.6618609383 5633.171440294081 5098.859621177138 4371.876602518611 0.8906382315321955 1.0225741743134389 1.06284001287128 1.0827082148643843 1.1096014916347816 1.3392707134109458 1.1047103287906324 1.0827528522216905 1.2885019300519245 1.1662862621144696 1.0 12.094036965761832 -5.322138583746197 0.9125690187011221 1.1445404370674617 0.7780053483330556 0.43810401430171886 0.09008499482191176 1.8817788309643806 1.2342006595663038 0.017910484903056176 0.6683650690728857 4.762789815177242e-06 5.322138583746197 -0.3665350887344061 HYAHTDCPGHADYVK ddPTM_A549_MK2206_60min_R1 2 HYAHTDCPGHADYVK 15 0 P49411 P49411 TUFM Elongation factor Tu, mitochondrial 0 ; 77.185 0.00021488 9120200.0 1526.6399999999999 1617.1100000000001 1307.62 1447.8 2004.19 1596.3600000000001 1241.41 1736.2199999999998 2001.43 2099.62 1884.1299999999999 False True 1784.2995092355063 1699.413991764731 1493.060178534579 1802.5110649942117 1709.3763059344394 1765.2857556219942 1466.9581279286826 1982.334501950749 1548.1093006269589 1625.3143837505806 1416.2485216573853 1.2598774028356294 1.199940522992368 1.0542360014521348 1.272736414146295 1.2069748210109459 1.2464519670291645 1.0358055846102163 1.3997080820468526 1.0931056781017936 1.1476194741926602 1.0 10.467858734760007 -8.976865061597906 14.014138978727647 1.0410476462273814 1.2042566122026026 0.23500278845379963 0.10077675750668615 0.9584060870809537 579.9315532117763 0.016070726008844315 0.01662217454983203 1.054714552842105e-09 8.976865061597906 0.16320896597522117 HYEDGYPGGSDNYGS(ph)LSR ddPTM_A549_MK2206_60min_R1 4 HYEDGYPGGSDNYGSLSR 18 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 HYEDGYPGGSDNYGS(1)LSR;HYEDGYPGGS(0.011)DNYGS(0.928)LS(0.061)R;HYEDGYPGGSDNYGS(1)LSR;HYEDGYPGGSDNYGS(0.949)LS(0.051)R 275.37 1.0462999999999998e-115 934756000.0 11985.599999999999 16457.4 16249.4 14947.8 22381.9 17118.1 16735.1 18319.6 30936.7 27792.0 21816.4 True False 14008.476260213993 17295.011364761143 18553.809260396592 18610.01167103224 19089.55215912365 18929.525979924863 19775.651047356867 20916.45940142202 23929.58684575832 21513.767897617705 16398.785777991012 0.8542386277778518 1.0546519479492784 1.131413600468997 1.1348408304722744 1.1640832691859384 1.1543248528394332 1.2059216648770412 1.2754883004505264 1.459229187436211 1.3119122469720634 1.0 14.001301376287799 -4.382840337152374 0.6360805470785249 1.2193378895576739 6.302347206119645e-10 0.5206763187134489 0.10638500481041104 7.885630542280237 0.9741675932160955 0.027110751725394754 9.099722748723678 4.14151904520364e-05 4.382840337152374 -1.219337888927439 HYEDGYPGGSDNYGS(ph)LSR ddPTM_A549_PD325901_60min_R1 3 HYEDGYPGGSDNYGSLSR 18 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 HYEDGYPGGSDNYGS(0.998)LS(0.002)R;HYEDGYPGGS(0.027)DNYGS(0.912)LS(0.061)R;HYEDGYPGGSDNYGS(1)LSR 309.45 2.493799999999999e-152 699435000.0 13243.8 16413.3 18481.800000000003 20726.4 23667.7 23127.0 22644.1 24130.0 23753.5 22500.9 20458.4 True False 14588.300826429737 17796.50639348135 19736.08608809183 22006.62265493031 22005.362401132457 22938.661379732417 23505.833616826963 23648.70822038121 22755.22300002133 21080.189333972394 17942.1464964828 0.8130744462090688 0.9918827937878002 1.099984669725035 1.2265323248388518 1.2264620849822048 1.2784792156406193 1.3100903853078456 1.3180534572614857 1.2682553341364167 1.1748978494911266 1.0 14.131064875970807 -5.512796031978589 1.6568363390051208 1.1789712935303946 0.774674919200668 0.6426246237999989 0.09189094128644719 0.4552894439407564 1.699869171580896 0.018829101287323628 0.25040200104489885 3.07046370452897e-06 5.512796031978589 -0.40429637432972665 HYGGLTGLNK ddPTM_A549_PD325901_60min_R1 2 HYGGLTGLNK 10 0 P18669;Q8N0Y7;P15259 P18669 PGAM1;PGAM4;PGAM2 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4;Phosphoglycerate mutase 2 0 ; 120.15 5.7279e-05 7621200.0 3196.3999999999996 3539.0 3431.8 3703.6000000000004 5025.8 4806.3 3809.8 4153.8 5382.5 4374.8 4060.5 False True 3520.896174934686 3837.243950121582 3664.7025850898463 3932.3629605141227 4672.805146068755 4767.159086323684 3954.784023802554 4070.949200406937 5156.292243147955 4098.574381391961 3561.0842416302567 0.9887146543106846 1.0775493332235522 1.0290974142785663 1.1042600213001126 1.312186072837624 1.3386819190048953 1.110556155220878 1.1431768877624937 1.4479557048578595 1.150934407413974 1.0 11.798100849412394 -6.5607736714234495 6.172094000588848 1.2186081824206976 1.0407471392422865 0.32684831377150636 0.11668803684935461 0.23328153619315145 24.04779111462193 0.023777358119718914 0.05043629651187102 2.7493265660894875e-07 6.5607736714234495 -0.17786104317841112 HYGIT(ph)SPISLAAPK ddPTM_A549_MK2206_60min_R1 1 HYGITSPISLAAPK 14 0 G3XAH6;P51003;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 HYGIT(0.425)S(0.425)PIS(0.15)LAAPK 61.641000000000005 0.0057427 47505000.0 1669.5 1914.6 1942.6 1759.4 2585.2 1988.7 1936.4 1539.3 3264.0 2728.5 2674.4 True False 1951.2707846438448 2012.0449620822048 2218.0898906572797 2190.4530789824666 2204.9205045937324 2199.142914007779 2288.218814832408 1757.5004889085417 2524.7092115369487 2112.1299549744526 2010.2726703149535 0.9706498095793816 1.0008816176001505 1.1033776280258374 1.089629835458731 1.096826583355124 1.0939525500604028 1.1382629076253163 0.8742597533463908 1.2559038626045675 1.0506683924840607 1.0 10.973175484290786 -5.698670437428072 3.842603827370579 1.101678171855678 0.977135675770649 0.09316736760401778 0.09053150360226599 0.3164351298701622 9.124024406014176 0.014787165554078696 0.06388852261231155 2.0013800324966984e-06 5.698670437428072 -0.1245424960850291 HYGIT(ph)SPISLAAPK ddPTM_A549_PD325901_60min_R1 1 HYGITSPISLAAPK 14 0 G3XAH6;P51003;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 HY(0.003)GIT(0.408)S(0.408)PIS(0.181)LAAPK 46.926 0.029068 57764000.0 2042.8 2235.9 1895.1 2641.4 1938.7 2426.3 2422.1 2678.1 2332.0 2337.6 2238.3 True False 2250.1835521701228 2424.3271398917327 2023.7128821620624 2804.5532789453505 1802.5324001519152 2406.5410172372012 2514.2743409239774 2624.683194571193 2233.9941497484488 2190.0035370626883 1963.0032897527412 1.146296373478597 1.2350092088725433 1.030926892851498 1.4287053381854549 0.9182523582927674 1.2259485400762256 1.2808304265453747 1.3370752908426335 1.1380491114866351 1.1156392597480262 1.0 10.938846875248132 -9.82565877522173 1.0496335336599503 1.021811369892624 1.195149570006354 0.11775259397514737 0.13600335827590748 0.46900819385294706 1.0564034931074526 0.03996906755307293 0.024333785812866895 1.4939677576737876e-10 9.82565877522173 0.1733382001137298 HYGITS(ph)PISLAAPK ddPTM_A549_MK2206_60min_R1 2 HYGITSPISLAAPK 14 0 G3XAH6;P51003;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 HY(0.001)GIT(0.077)S(0.492)PIS(0.429)LAAPK;HYGIT(0.005)S(0.994)PIS(0.001)LAAPK 159.64 4.0763000000000004e-19 45852600.0 2809.7 3919.2999999999997 3810.8 3534.5 5596.4 3936.1000000000004 4553.4 4009.9 6445.6 6493.700000000001 5448.0 True False 3283.9086694302528 4118.775629316192 4351.228742570145 4400.452658669734 4773.1769735062535 4352.61548942828 5380.6938398357215 4578.315604803718 4985.681891508138 5026.768659929484 4095.1112428491892 0.8019095147084359 1.0057786919728555 1.0625422569821965 1.0745624227800226 1.1655793189601602 1.0628808917044048 1.3139310560198807 1.1179954177797469 1.217471662146919 1.227504788473607 1.0 11.999686927572817 -4.739848719823683 0.9549244892700236 1.1218394463620212 0.23646615374465887 0.5853068711382474 0.08494188323800486 3.043987480575408 1.0601258657568968 0.01456389517372209 3.5348557869763164 1.8203348353918304e-05 4.739848719823683 -0.8853732926173623 HYGITS(ph)PISLAAPK ddPTM_A549_PD325901_60min_R1 4 HYGITSPISLAAPK 14 0 G3XAH6;P51003;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 HYGIT(0.124)S(0.871)PIS(0.005)LAAPK;HY(0.001)GIT(0.456)S(0.472)PIS(0.072)LAAPK;HYGIT(0.153)S(0.844)PIS(0.003)LAAPK;HYGIT(0.062)S(0.938)PISLAAPK 194.12 9.740899999999999e-28 132830400.0 9316.2 10554.599999999999 12231.4 12541.099999999999 13736.7 14302.900000000001 11717.400000000001 13182.699999999999 14755.599999999999 13727.2 14125.5 True False 10261.97376577604 11444.073183371918 13061.496357383287 13315.735264095376 12771.881581042344 14186.421924511376 12163.312069007305 12919.760706871904 14135.473445981219 12860.462249301387 12388.153048922102 0.8283699535556625 0.9237917176336202 1.0543538093049127 1.0748765543588423 1.0309754432807585 1.1451603696279602 0.9818503227214842 1.042912583970381 1.141047692110258 1.0381258770790194 1.0 13.596673491500702 -5.580081896913421 2.3098058023154824 1.064192485469679 0.8261906611984839 0.6874014977762555 0.048613356349442347 0.17023219574134568 1.5771441115873843 0.008153767448112362 0.06189794907101996 2.6297720368930726e-06 5.580081896913421 -0.23800182427119498 HYNGEAYEDDEHHPR ddPTM_A549_MK2206_60min_R1 6 HYNGEAYEDDEHHPR 15 0 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ;;;;; 164.65 4.6005e-20 331783600.0 3907.04 4012.0299999999997 4236.513000000001 4060.153 4852.0 4838.11 4358.0869999999995 4030.7 6334.66 5143.21 4495.4 False True 4566.452834043057 4216.225190234341 4837.314247368553 5054.8906672671965 4138.277227405532 5350.075588922502 5149.894995908144 4602.064068501046 4899.869624373359 3981.3552888855215 3379.0681132717004 1.351394136184399 1.2477479141881174 1.4315527492237916 1.4959422236602746 1.2246800267659435 1.5832991255516367 1.5240577648261382 1.3619329099717996 1.450065361254047 1.1782406141054882 1.0 11.722409716456756 -10.695125261192297 0.8255322584446158 0.9842409537424298 1.4105699597047225 0.5118345520896055 0.1155755354997627 0.3173196017347052 0.36187320468343165 0.08658396900023325 0.019650645349223898 2.0177843012076673e-11 10.695125261192297 0.42632900596229273 HYNGEAYEDDEHHPR ddPTM_A549_PD325901_60min_R1 2 HYNGEAYEDDEHHPR 15 0 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ; 121.24 1.9284000000000002e-07 209360000.0 2012.4699999999998 2718.71 2697.33 2584.0 3226.7 3776.3 2886.6 3144.7 3106.8999999999996 3448.7 3043.3 False True 2216.774472897889 2947.8252330135747 2880.3870341629477 2743.6078113102085 3000.067723510693 3745.5470648282767 2996.45114260813 3081.9764915305755 2976.327797535784 3230.9484934411744 2668.993393068185 0.8305657401233053 1.1044707868777652 1.0792035085751006 1.0279560145917968 1.1240446421869619 1.4033556900350816 1.1226896066473624 1.1547336533447312 1.1151499307813189 1.2105494535252426 1.0 11.382080018842018 -5.260007989237749 23.43585146695988 1.094281934858544 0.8305655426784244 0.34573074501167955 0.10806008699662123 48.45348790928914 793103.7239572749 0.015426949277055985 0.13309116848210195 5.49530764651787e-06 5.260007989237749 -0.26371639218011955 HYQGEEKS(ph)D ddPTM_A549_MK2206_60min_R1 4 HYQGEEKSD 9 1 P13984 P13984 GTF2F2 General transcription factor IIF subunit 2 1 HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D 144.92 9.1865e-06 819299300.0 8542.18 10671.65 10793.7 9131.93 14909.399999999998 10660.539999999999 10135.59 10357.51 14930.26 14424.140000000001 13620.550000000001 True False 9983.891147750192 11214.791402697456 12324.408963650516 11369.253259947916 12716.247010362747 11788.631266906263 11977.09550579798 11825.718761044058 11548.579948726001 11165.716755999705 10238.191526943745 0.9751615919154947 1.0953879279542293 1.2037681587823879 1.1104747581667689 1.2420403522338421 1.1514368759250344 1.169844837760456 1.1550593412833148 1.127990223501262 1.0905946354505092 1.0 13.321673279894233 -10.345794218240854 0.7517314584785877 1.000571266632068 1.1422537452736339 0.16452062724220096 0.06951106708744736 0.5322215271412135 0.5540755122702276 0.041623821074555194 0.013015430970571375 4.510303656410635e-11 10.345794218240854 0.1416824786415658 HYQGEEKS(ph)D ddPTM_A549_PD325901_60min_R1 6 HYQGEEKSD 9 1 P13984 P13984 GTF2F2 General transcription factor IIF subunit 2 1 HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D 132.86 1.3245e-05 1062742000.0 23307.11 26414.52 28043.22 28216.880000000005 34029.03 32517.95 33276.880000000005 33775.520000000004 34062.72 31581.1 28378.9 True False 25673.230649412475 28640.564302166003 29946.401546781068 29959.772592415953 31638.94832658046 32253.134596491953 34543.24987820744 33101.84075721713 32631.182334699606 29587.063956335773 24888.475208669115 1.0315308766070979 1.150756085378423 1.2032236324525893 1.2037608708941885 1.2712288744615432 1.2959064115449543 1.3879215013612158 1.3300067794304709 1.3110960820666733 1.1887857214342346 1.0 14.603190225928033 -4.011319157896795 12.705942209410313 1.1921402754281603 1.1886368427317633 0.0 0.11801595057068263 0.0 0.0 0.019896236394116456 0.0 9.742733925347292e-05 4.011319157896795 -0.0035034326963969686 HYQIHR ddPTM_A549_MK2206_60min_R1 2 HYQIHR 6 0 Q9BZE4 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 0 ; 97.306 0.037228 3457900.0 462.07 377.62 347.22 394.31 483.78999999999996 417.26 366.42 381.64 743.46 473.47 576.95 False True 540.0561194731241 396.83924505457117 396.46101710801065 490.91596770124875 412.6251318727377 461.41417624522865 432.9937709826955 435.7386387234822 575.0674970616604 366.5127981608038 433.6773919900585 1.2452946117271988 0.9150563353869002 0.9141841941281067 1.1319842278347367 0.9514564039856536 1.0639571828448138 0.9984236646410688 1.004752949476949 1.3260259992405672 0.8451277491753725 1.0 8.760478425887948 HYQIHR ddPTM_A549_PD325901_60min_R1 1 HYQIHR 6 0 Q9BZE4 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 0 69.439 0.056010000000000004 1574300.0 158.99 184.06 203.95 277.01 308.55 191.7 77.119 276.81 256.38 188.35 200.22 False True 175.13054775774813 199.57138215862622 217.7912734509804 294.12027856464437 286.8785124397139 190.13885875793238 80.05380574613608 271.28880739675606 245.60524018546616 176.4575488559879 175.5942092991528 0.9973594713444409 1.1365487674973636 1.2403101122767561 1.6749998746459998 1.6337583886435032 1.0828310313696077 0.4559023105924389 1.5449758194165288 1.3987092237594145 1.0049166744181426 1.0 7.456101458605025 HYS(ph)DHWEDER ddPTM_A549_MK2206_60min_R1 1 HYSDHWEDER 10 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 HY(0.002)S(0.998)DHWEDER 66.498 0.0015504000000000002 1916000.0 246.72 326.95 366.57 219.47 462.8 484.22 311.42 367.13 508.91 417.18 345.25 True False 288.36030427512975 343.59035848363993 418.55513807177954 273.24015985238253 394.7227330674529 535.4598390007776 368.00098291422694 419.17180178847104 393.6426975622759 322.9387482559066 259.5148965847432 1.1111512597927773 1.3239716216885542 1.612836656315421 1.0528881518874869 1.5210022170675597 2.0633106077821086 1.4180341389152518 1.6152128733449902 1.5168404694400035 1.2443938768287726 1.0 8.019673543818795 -10.623658550347185 0.9069319154079323 1.0007633258125768 1.4787956043365351 0.18455442864771376 0.2658725385770595 0.5633732526622357 0.8282576136184291 0.17427366255982615 0.047528352981210595 2.378709733379661e-11 10.623658550347185 0.47803227852395835 IAAAILNTPDLR ddPTM_A549_MK2206_60min_R1 1 IAAAILNTPDLR 12 0 P00505-2;P00505 P00505-2 GOT2 Aspartate aminotransferase, mitochondrial 0 78.934 0.0026198000000000003 1063200.0 1139.1 1241.7 1051.4 1243.7 1693.0 1439.3 1555.6 1424.1 1962.1 1613.3 1938.8 False True 1331.3522316788278 1304.8972262704872 1200.504329783314 1548.4065558318148 1443.9619427035389 1591.6057706699846 1838.2323839874493 1625.9705361233387 1517.6874828298546 1248.854409514488 1457.3424518421446 0.9135479653364522 0.895395055994588 0.8237626841006547 1.0624864141400405 0.990818555294473 1.0921288737991028 1.261359251330285 1.1157093063940056 1.041407584683635 0.8569395669054185 1.0 10.509124211839783 -6.270486710495929 24.56486118785412 1.0495153552827137 0.8793512170567932 0.4032194773869353 0.09477667778302466 343.32418888443794 932177.5857075925 0.011970587416209733 0.028197425075676234 5.364302860706821e-07 6.270486710495929 -0.17016413822592047 IAAAILNTPDLR ddPTM_A549_PD325901_60min_R1 1 IAAAILNTPDLR 12 0 P00505-2;P00505 P00505-2 GOT2 Aspartate aminotransferase, mitochondrial 0 102.52 0.00058024 2067800.0 1875.3 2322.8 2212.2 2664.8 2572.9 2330.5 2175.0 2653.0 2762.3 2637.1 2185.6 False True 2065.6790754771055 2518.5505078673095 2362.333195039269 2829.3986438000957 2392.1883800231403 2311.521180674813 2257.770815205667 2600.083833761763 2646.2101371570075 2470.5930559496987 1916.7850556599162 1.077679038334284 1.3139451919402698 1.2324455410708313 1.476116811034914 1.2480211972435016 1.2059365622917986 1.1778946254505074 1.3564816910921702 1.3805461021011365 1.2889254581020906 1.0 10.904472849879003 -10.895633268621623 1.1283511559844337 0.9988727790794782 1.2848717021074079 0.0 0.13229362199814715 0.32914550674921567 0.7394722829353755 0.07396073932029905 0.017403758348379865 1.2716474694874785e-11 10.895633268621623 0.2859989230279296 IAAASSDLYLRPGS(ph)EQPGRPGSHGYVR ddPTM_A549_PD325901_60min_R1 1 IAAASSDLYLRPGSEQPGRPGSHGYVR 27 2 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 IAAASSDLYLRPGS(0.673)EQPGRPGS(0.327)HGYVR 83.557 5.2194e-07 6046100.0 699.55 609.82 520.08 564.87 727.09 560.12 509.61 723.68 548.8 753.32 877.8 True False 770.5678010185089 661.2116715634766 555.3757562951009 599.7607369871512 676.0217067243282 555.558568427194 529.003487419292 709.2456346840229 525.7358445034082 705.7552466376048 769.8361648326653 1.0009503790796872 0.8588992070893424 0.7214207147774353 0.7790758142903271 0.8781371122922901 0.7216581836577559 0.6871637259783429 0.9212942533534877 0.6829191307447661 0.9167603171656798 1.0 9.588407636448554 -11.021678871582635 1.3024879765643345 1.0002792843701256 0.7902447137580112 0.23379913011515874 0.10055408092872947 0.3844235483485345 1.159085091192451 0.07114710649397638 0.01596747544314213 9.513079550232478e-12 11.021678871582635 -0.2100345706121144 IAAASSDLYLRPGSEQPGRPGS(ph)HGYVR ddPTM_A549_PD325901_60min_R1 1 IAAASSDLYLRPGSEQPGRPGSHGYVR 27 2 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 IAAASSDLYLRPGS(0.022)EQPGRPGS(0.977)HGYVR 65.587 0.00010957 6729000.0 593.15 510.79 550.24 603.38 671.07 781.59 538.02 591.81 628.48 631.26 778.78 True False 653.3661513460486 553.8360659176607 587.5825952619141 640.649412224595 623.9363582658204 775.2249901753387 558.494645515841 580.0058852840364 602.0671711980725 591.4021358684945 682.994997093169 0.9566192345870453 0.8108932983034876 0.8603029271995686 0.9380001536632083 0.9135299100598064 1.1350375822293006 0.8177141090239279 0.8492095663255881 0.8815103679536076 0.8658952677333007 1.0 9.415731200654205 -10.806184472105866 1.083427281273324 0.9993526287909524 0.905107098078848 0.0 0.09322776571875489 0.8076660070736006 1.7015372766907697 0.056535802250294816 0.014499632609554409 1.5624838167890982e-11 10.806184472105866 -0.0942455307121044 IAAEEEEENDGHYQEEEEGGAHS(ph)LKDVCDLR ddPTM_A549_MK2206_60min_R1 1 IAAEEEEENDGHYQEEEEGGAHSLKDVCDLR 31 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 IAAEEEEENDGHYQEEEEGGAHS(1)LKDVCDLR 264.83 4.921699999999999e-152 18827000.0 718.54 705.23 621.45 690.78 1283.2 1236.5 700.88 796.45 1351.8 1073.1 1391.5 True False 839.8119853836403 741.1231947191231 709.5809546736161 860.0211310102923 1094.4429798447613 1367.345609277728 828.2208236623316 909.3492265258291 1045.6194583810202 830.6859646996825 1045.9521465537152 0.8029162597454562 0.7085631949425542 0.6784067101077222 0.8222375505838934 1.0463604701714295 1.3072735820495853 0.7918343361990491 0.8693984992736272 0.9996819279220458 0.7941911754153299 1.0 10.030601132892352 -6.599942960275667 4.288834089068498 0.9997507225140324 0.730222551712373 0.37208695849750906 0.13760575748453654 0.1357390127495232 4.776331658829917 0.017525434563439905 0.03791238783870161 2.512216361372673e-07 6.599942960275667 -0.26952817080165936 IAAPELHKGDS(ph)DS(ph)EEDEPTK ddPTM_A549_MK2206_60min_R1 3 IAAPELHKGDSDSEEDEPTK 20 1 Q92733 Q92733 PRCC Proline-rich protein PRCC 2 IAAPELHKGDS(1)DS(0.983)EEDEPT(0.017)K;IAAPELHKGDS(0.993)DS(0.977)EEDEPT(0.03)K;IAAPELHKGDS(1)DS(0.988)EEDEPT(0.012)K 66.138 0.00045379 12840600.0 3957.3999999999996 3937.8 3979.7 3797.1 5787.9 4096.400000000001 3962.0 3994.3 6068.7 5339.2 6161.3 True False 4625.3123708592675 4138.217200296303 4544.081302300412 4727.389670458298 4936.507577184769 4529.878329029753 4681.8441150413155 4560.504257030722 4694.149139722512 4133.071011764556 4631.279166770688 0.9987116311289909 0.8935365481718114 0.9811719697020386 1.0207524746893255 1.0659058543920408 0.9781052201585076 1.0109181386933939 0.9847180644501472 1.0135750773572265 0.8924253673627012 1.0 12.17719500788308 -5.994329356014787 24.96223143830326 1.0080538351563346 0.9439316148097662 0.10319486231266528 0.04667449898937098 98.64344529569907 434217.5733415243 0.003836010978283169 0.01187794298062858 1.0131427569950883e-06 5.994329356014787 -0.06412222034656845 IAAPELHKGDS(ph)DS(ph)EEDEPTK ddPTM_A549_PD325901_60min_R1 4 IAAPELHKGDSDSEEDEPTK 20 1 Q92733 Q92733 PRCC Proline-rich protein PRCC 2 IAAPELHKGDS(1)DS(0.908)EEDEPT(0.092)K;IAAPELHKGDS(1)DS(1)EEDEPTK;IAAPELHKGDS(0.999)DS(0.668)EEDEPT(0.333)K;IAAPELHKGDS(1)DS(1)EEDEPTK 155.05 3.3047e-26 124213000.0 28904.2 29343.3 31355.9 29294.2 31964.899999999998 28303.7 29778.2 32298.7 31287.2 34027.0 34376.6 True False 31838.533105852588 31816.162871320306 33483.899932344175 31103.63620204473 29719.795696918514 28073.204051261837 30911.425696256276 31654.477090660013 29972.30778816879 31878.529412915836 30148.496131221942 1.0560570904523636 1.0553150887805418 1.1106325100464323 1.031681184582658 0.98578037085374 0.931164325048674 1.025305725423705 1.049952108817742 0.9941559823652135 1.0573837339734589 1.0 14.879798418884096 -6.51548298971563 5.291776187163612 0.9978817172912311 1.0724154240026709 0.40107658356634024 0.03523856531211188 0.1009612252389651 8.883700983313537 0.004332701146797632 0.00969489954327367 3.0515255478154994e-07 6.51548298971563 0.07453370671143977 IAAPELHKGDS(ph)DS(ph)EEDEPTKKK ddPTM_A549_PD325901_60min_R1 2 IAAPELHKGDSDSEEDEPTKKK 22 3 Q92733 Q92733 PRCC Proline-rich protein PRCC 2 IAAPELHKGDS(1)DS(0.997)EEDEPT(0.003)KKK;IAAPELHKGDS(1)DS(0.999)EEDEPT(0.001)KKK 54.744 0.0020204999999999997 17483400.0 3079.7 3143.6000000000004 4423.5 3735.3 4006.9 4191.700000000001 4125.0 4689.4 4269.7 3700.3999999999996 4426.4 True False 3392.348876844688 3408.5222044651605 4723.705310666396 3966.020997518199 3725.4691670545776 4157.564184953707 4281.979132286614 4595.8662382368675 4090.259357281708 3466.7561124857834 3881.9808612614606 0.8738705825928093 0.8780368389960459 1.2168285933103273 1.0216487765551294 0.9596825178174567 1.0709903870063633 1.1030397328891448 1.183897191276576 1.0536526334013319 0.8930379196561137 1.0 11.922577290031736 -5.636261827429716 15.38620624326165 1.0495520712040107 0.874923633783446 0.3818436334465899 0.08799579916419878 0.5163460252325506 66.9273275372169 0.010463905174254736 0.04053004835382792 2.3106713127934605e-06 5.636261827429716 -0.17462843742056477 IAAPELHKGDS(ph)DSEEDEPTK ddPTM_A549_PD325901_60min_R1 1 IAAPELHKGDSDSEEDEPTK 20 1 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 IAAPELHKGDS(0.936)DS(0.064)EEDEPTK 143.9 1.9133e-21 6017200.0 3260.0 3236.5 3427.1 3483.2 3896.0 3803.2 3834.3 3334.7 3244.0 3272.1 4149.3 True False 3590.952800114844 3509.2512134977364 3659.683614826454 3698.349353078838 3622.3584004703443 3772.2280001469394 3980.2163847094675 3268.1867924784565 3107.665961313879 3065.49904757992 3638.962404579834 0.986806787450025 0.9643548966268931 1.005694263348404 1.016319747745748 0.9954371597550464 1.0366218665516806 1.0937778251570136 0.8981095238481343 0.8539978202035587 0.8424102001498617 1.0 11.82931143092097 -8.28671109411442 24.984358898209564 0.9266572321142763 1.0121333013354121 0.5141653735784835 0.05143271679275837 705.5824574386958 697557.3547372163 0.010104128691677384 0.012217271725455477 5.1676001942302484e-09 8.28671109411442 0.08547606922113582 IAAPELHKGDSDS(ph)EEDEPTK ddPTM_A549_MK2206_60min_R1 2 IAAPELHKGDSDSEEDEPTK 20 1 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 IAAPELHKGDS(0.186)DS(0.805)EEDEPT(0.009)K;IAAPELHKGDS(0.191)DS(0.809)EEDEPTK 64.68 0.0007542000000000001 25376000.0 2318.73 2604.3999999999996 2903.4 2865.7 3867.6 3004.3 2692.2 2569.2 4070.3 3475.9 4183.9 True False 2710.07493649429 2736.9528357081867 3315.1457780986057 3567.79662864616 3298.68116337874 3322.21303190706 3181.337891598748 2933.391967845014 3148.3835489334692 2690.691775882606 3144.922160234344 0.8617303699155303 0.8702768133072784 1.0541264963618615 1.1344626184262396 1.0488911951744264 1.0563736915064077 1.0115792154810248 0.932739132604297 1.0011006277811554 0.8555670502452465 1.0 11.618808594156592 -5.7509434856112245 24.58447145825427 1.0153062359362566 0.8660034538453452 0.3982589265113483 0.06831755582263703 96.17226711840723 225257.85552777123 0.0072674088240053695 0.027533203433289802 1.7744203697510486e-06 5.7509434856112245 -0.1493027820909114 IAAPELHKGDSDS(ph)EEDEPTK ddPTM_A549_PD325901_60min_R1 1 IAAPELHKGDSDSEEDEPTK 20 1 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 IAAPELHKGDS(0.161)DS(0.839)EEDEPTK 109.39 2.6398e-10 4585800.0 2000.1 1665.8 2642.4 1914.1 2191.7 1803.5 2202.2 1668.0 1903.0 2238.7 2061.6 True False 2203.1486796042013 1806.1828121256078 2821.729154042024 2032.329609763496 2037.762552954533 1788.8128939485193 2286.0059260900775 1634.7304314793128 1823.023527860762 2097.3480999410676 1808.036269559152 1.2185312411577829 0.9989748781787458 1.5606595960212888 1.1240535624094712 1.1270584485848807 0.9893678152732412 1.2643584448930703 0.9041469239319542 1.008289246490207 1.1600143953154534 1.0 10.820207903448532 -7.351312418054496 0.8536665601121805 1.0015168371396064 1.232578381469847 0.18106332489243127 0.15708979100244744 0.543674549621792 0.7836333986337554 0.025389456061211364 0.05920247689834834 4.453357723227662e-08 7.351312418054496 0.23106154433024062 IAASSS(ph)FR ddPTM_A549_MK2206_60min_R1 2 IAASSSFR 8 0 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 IAASS(0.001)S(0.999)FR;IAASS(0.018)S(0.982)FR 146.79 0.00080571 778660000.0 10722.8 13211.099999999999 12493.8 11255.9 15316.5 11257.5 10034.9 11438.2 15889.0 15039.2 15173.900000000001 True False 12532.5464927098 13883.48856082952 14265.608707862624 14013.596005296544 13063.463139644855 12448.761177876288 11858.11143615045 13059.599878018376 12290.166869519173 11641.834274821982 11405.8018516647 1.0987869731298767 1.217230383395026 1.2507326440867925 1.2286375116407295 1.1453349189770656 1.0914411226650729 1.0396560969906499 1.1449962087595182 1.0775364178122555 1.0206940666010984 1.0 13.477480254235935 -8.109106666664282 0.3426527541538422 1.0032380935637162 1.2197375756910962 0.596547138401295 0.05188464843588107 0.6588930330132662 0.1988340832771875 0.03122954697189911 0.05065162197213972 7.778454816703713e-09 8.109106666664282 0.21649948212738002 IAASSS(ph)FR ddPTM_A549_PD325901_60min_R1 4 IAASSSFR 8 0 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 IAASS(0.009)S(0.991)FR;IAASS(0.008)S(0.992)FR;IAASS(0.005)S(0.994)FR;IAAS(0.046)S(0.409)S(0.545)FR 160.56 0.00024425 1567020700.0 17689.7 17546.9 18846.9 19242.8 21947.9 20421.0 21744.6 21238.9 19363.4 20690.600000000002 21540.7 True False 19485.545321531157 19025.63884385091 20125.96396961648 20431.38405243039 20406.355220144524 20254.698146560982 22572.102652101672 20815.273477905277 18549.62363603736 19384.191984920126 18891.330457747787 1.031454368188222 1.0071095249963213 1.065354502936152 1.0815217116722973 1.0801968270993527 1.0721689608819502 1.1948392254630384 1.1018426428175911 0.9819119768999496 1.0260892967954094 1.0 14.205436689386001 -8.76622539817252 24.999059731914194 0.9914584278384486 1.080155136912994 0.3511209711187634 0.045704900549364505 84.21625976262493 439889.8694298894 0.00827420031949997 0.008948549374573355 1.7130679970800406e-09 8.76622539817252 0.08869670907454541 IAAYGHEVGK ddPTM_A549_PD325901_60min_R1 2 IAAYGHEVGK 10 0 Q16719-2;Q16719;A0A087X297;B8ZZA3;A0A087WYM2 Q16719-2 KYNU Kynureninase 0 ; 82.749 0.00036339 1834200.0 1333.4 1621.2 1523.8 1374.4 1833.8 1749.6 1567.6 1660.7 1533.5 1770.9 1644.4 False True 1468.765786402801 1757.8242136018941 1627.2142313537818 1459.2935665111268 1705.0002142665596 1735.351837678031 1627.2558758236346 1627.5760357060526 1469.0523278898993 1659.0850717763146 1442.1492247104525 1.0184561772362306 1.2188920421566092 1.1283258372104217 1.0118880497988108 1.1822633781943621 1.203309482780082 1.1283547138822245 1.1285767157922435 1.0186548678309266 1.1504253813327934 1.0 10.49400473815285 -8.777253540073769 4.69863813739993 1.0081201324162072 1.1315721377072245 0.060310208151139744 0.07556883169580746 0.12503030296828957 6.7861241968015715 0.01046048977298167 0.011350844205429268 1.67011532034499e-09 8.777253540073769 0.1234520052910173 IACDEEFS(ph)DS(ph)EDEGEGGR ddPTM_A549_PD325901_60min_R1 2 IACDEEFSDSEDEGEGGR 18 0 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 2 IACDEEFS(1)DS(1)EDEGEGGR;IACDEEFS(1)DS(1)EDEGEGGR 78.285 0.00042433 3203700.0 1425.69 1417.4099999999999 940.21 1470.26 1392.38 1284.77 1243.96 1291.69 1142.46 1336.1799999999998 1107.76 True False 1570.4249992624946 1536.860115100828 1004.0183045420256 1561.0746209972713 1294.5840322502313 1274.3072590841355 1291.299578521032 1265.9262296387976 1094.4463792116687 1251.8133667660945 971.512542669212 1.6164742402067007 1.5819251400278727 1.0334589214705396 1.6068496827722354 1.3325448467123095 1.3116735020044112 1.329164083639323 1.3030467174007756 1.1265385994963053 1.2885200260274163 1.0 9.924088811555352 -2.000032773189914 0.07619618749747023 0.62172020803735 3.0856611356446018 0.27547136435091346 0.17449865441268253 86.41948395170797 0.4687627029000971 2.377116737209016 22.54943501684659 0.009999245397887194 2.000032773189914 2.463940927607252 IACDEEFS(ph)DS(ph)EDEGEGGRR ddPTM_A549_MK2206_60min_R1 4 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 2 IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR 126.02 1.5576e-15 64524000.0 8331.86 9772.4 8113.9 7806.7 11481.04 9943.6 8368.529999999999 8804.95 12779.82 12361.259999999998 11959.78 True False 9738.074273580502 10269.773418704763 9264.573027799914 9719.341850456078 9792.194224841722 10995.825151972516 9888.983576993109 10053.078626528471 9885.21117517896 9568.842780732082 8989.83655286396 1.0832315155360828 1.1423759885192843 1.0305607864303639 1.0811477820872852 1.0892516418134597 1.2231396074124943 1.1000181726154632 1.1182715689447975 1.0995985429823807 1.0644067580609864 1.0 13.134079170533488 -10.382236866055383 0.7504792616462237 0.9997539171068112 1.1087898858740362 0.23016223027460714 0.04857419287663507 0.5017665929424491 0.5141983057039466 0.030526929902501047 0.009167876787385065 4.147277866428168e-11 10.382236866055383 0.10903596876722499 IACDEEFS(ph)DS(ph)EDEGEGGRR ddPTM_A549_PD325901_60min_R1 4 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 2 IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR 133.74 2.8206e-17 174487000.0 14244.490000000002 15991.300000000001 17595.4 14542.900000000001 12266.5 13658.66 14215.100000000002 16037.900000000001 11269.7 15771.57 17693.7 True False 15690.580138560688 17338.94297247222 18789.52965373563 15441.18190367772 11404.943357127699 13547.428401474293 14756.06340930119 15718.011503010845 10796.073700437433 14775.750378607021 15517.487069605528 1.0111547100492968 1.1173808552052493 1.2108616278816904 0.9950826338320418 0.7349736014581145 0.8730426737722221 0.9509312521486964 1.012922481101859 0.6957359559579696 0.9521999478606711 1.0 13.9216073233017 -6.5269629998066065 9.716691958997997 0.8667292506151515 1.1119150929475083 0.4639460958854703 0.10450831403339567 0.08491836078434502 120.70954468241271 0.018253505252857762 0.03897837199691923 2.9719192168608854e-07 6.5269629998066065 0.24518584233235685 IACDEEFS(ph)DSEDEGEGGRR ddPTM_A549_MK2206_60min_R1 3 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 IACDEEFS(0.5)DS(0.5)EDEGEGGRR;IACDEEFS(1)DSEDEGEGGRR;IACDEEFS(0.845)DS(0.155)EDEGEGGRR 187.06 6.229099999999999e-44 52352400.0 2178.43 2643.32 1907.38 1851.44 3049.8599999999997 2767.08 2314.92 2172.9300000000003 3622.29 2892.8700000000003 2957.8999999999996 True False 2546.0957264999633 2777.853697467427 2177.8751650581094 2305.042883114299 2601.22963412511 3059.8905689609524 2735.5109991901663 2480.9494818190337 2801.847098608509 2239.3686578145275 2223.371796112997 1.1451506810292222 1.2493878452195002 0.9795371016514526 1.036732986873398 1.1699481115451325 1.376238816337599 1.2303434828005444 1.1158500283921682 1.2601792932278937 1.0071948658022456 1.0 11.118533503183553 -4.43560628113776 16.40024582044119 1.1433945701457895 1.1457222371328932 0.0 0.12264323874463007 0.0 0.0 0.017519243610029715 0.0 3.667699270211658e-05 4.43560628113776 0.002327666987103738 IACDEEFS(ph)DSEDEGEGGRR ddPTM_A549_PD325901_60min_R1 3 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 IACDEEFS(1)DSEDEGEGGRR;IACDEEFS(0.998)DS(0.002)EDEGEGGRR;IACDEEFS(0.5)DS(0.5)EDEGEGGRR 207.07 5.0425e-56 76118700.0 2621.73 2628.4100000000003 3474.5 2872.4500000000003 2764.75 2379.7400000000002 2651.05 3291.68 2039.56 2592.18 3489.91 True False 2887.8860995843834 2849.915335105697 3710.3004638658053 3049.8747126927306 2570.5634978697103 2360.360186440283 2751.937158460225 3226.0248601269964 1953.8443859609533 2428.5093124157925 3060.6731943622344 0.9435460489227908 0.931140031662069 1.212249798737149 0.9964718606058972 0.8398686611183098 0.7711898777001317 0.8991280622607138 1.0540246067660344 0.638370796842975 0.7934559354096057 1.0 11.579633292923463 -6.7125850352798375 5.057621083292049 0.8442463156709825 1.0313376644328496 0.28285732124658025 0.1252117361149109 0.2283167654527856 12.67006780849366 0.022342294587826845 0.0466440789343545 1.9382730830496162e-07 6.7125850352798375 0.18709134876186706 IACDEEFSDS(ph)EDEGEGGRR ddPTM_A549_MK2206_60min_R1 2 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 IACDEEFS(0.01)DS(0.99)EDEGEGGRR;IACDEEFSDS(1)EDEGEGGRR 272.71 8.341399999999999e-112 31498000.0 3055.8999999999996 3831.0 2622.1 2546.8999999999996 4129.8 3679.9 3679.8 3149.8999999999996 4832.0 3994.1 4543.5 True False 3571.6612104181618 4025.981536475986 2993.953208222206 3170.8906143346835 3522.3118907129815 4069.304575480076 4348.372027897282 3596.4079711641784 3737.559715118424 3091.830035977077 3415.2235557792364 1.0458059778763829 1.1788339681785183 0.8766492615559067 0.9284577019764656 1.0313561713266268 1.191519239961321 1.2732320320697523 1.0530519927687727 1.094382155098963 0.9053082427781591 1.0 11.737764303077274 -4.181329876208242 12.46180649007128 1.058364844014771 1.0270234332632504 0.0 0.11960262797520477 0.0 0.0 0.014935840240745329 0.0 6.586733979258815e-05 4.181329876208242 -0.03134141075152064 IACDEEFSDS(ph)EDEGEGGRR ddPTM_A549_PD325901_60min_R1 3 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 IACDEEFS(0.096)DS(0.904)EDEGEGGRR;IACDEEFSDS(1)EDEGEGGRR;IACDEEFS(0.002)DS(0.998)EDEGEGGRR 301.27 4.403399999999998e-145 43273600.0 4409.57 5219.3 5665.290000000001 3689.8 4574.23 4617.76 5125.86 5173.88 3310.03 4665.63 5223.8099999999995 True False 4857.226300246135 5659.148728134944 6049.770647556287 3917.710565856195 4252.9518650368245 4580.154493573448 5320.927407278217 5070.682904569661 3170.920950039391 4371.041325558604 4581.314486459931 1.0602254690442363 1.235267464143872 1.3205316215327232 0.8551498870979025 0.9283256754380033 0.9997467991141165 1.1614412027386924 1.1068183421059739 0.6921421699844104 0.9541020024879783 1.0 12.161545885388191 -6.75807232022022 0.5167879157103121 0.8766004291398668 1.2220513469764482 0.14552266331125685 0.15598965080087338 1.3938886853450712 0.5688116130901386 0.04122410145737186 0.22361799431308343 1.7455314567778418e-07 6.75807232022022 0.34545091783658144 IACEEEFS(ph)DS(ph)EEEGEGGR ddPTM_A549_PD325901_60min_R1 2 IACEEEFSDSEEEGEGGR 18 0 Q13547 Q13547 HDAC1 Histone deacetylase 1 2 IACEEEFS(1)DS(1)EEEGEGGR;IACEEEFS(1)DS(1)EEEGEGGR 118.47 4.6407999999999996e-10 6692800.0 1814.1100000000001 2005.59 2195.92 1817.3400000000001 1923.1599999999999 2193.81 2030.46 2332.1 1179.23 1816.8200000000002 2191.96 True False 1998.2771117228026 2174.608107918716 2344.9483363396757 1929.5929643214004 1788.0838761418238 2175.944338715388 2107.730266410345 2285.584436002942 1129.671063982788 1702.105675139559 1922.3628159792788 1.0394900978694035 1.1312162770954035 1.2198260998640498 1.0037610737588254 0.930149013120059 1.1319113752244168 1.0964268809666073 1.188945404584635 0.5876471676379765 0.8854237405088812 1.0 10.908664932644752 -8.745904209319644 24.993976179877354 0.8052778106191284 1.091282324343223 0.4978856325060458 0.11959904094991992 176.54779326392094 284041.2110400805 0.02746190427078917 0.031085139559496055 1.7951295280550006e-09 8.745904209319644 0.28600451372409463 IACEEEFS(ph)DS(ph)EEEGEGGRK ddPTM_A549_MK2206_60min_R1 2 IACEEEFSDSEEEGEGGRK 19 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 2 IACEEEFS(1)DS(1)EEEGEGGRK;IACEEEFS(1)DS(1)EEEGEGGRK 96.71799999999999 4.5924e-07 16914300.0 6885.6 8240.8 7052.0 6151.700000000001 8666.5 7258.0 6693.3 6848.6 10799.599999999999 10214.1 11006.9 True False 8047.720943242676 8660.221520697287 8052.079640129283 7658.866776160311 7391.669330443127 8026.036742529525 7909.385970521462 7819.410022957871 8353.507843417414 7906.727715999465 8273.582955014077 0.9727008222435818 1.0467316962657507 0.97322764320015 0.9257013337273392 0.8934060818189441 0.9700799262144909 0.9559807417810564 0.9451056531945495 1.0096602510469663 0.9556594475441519 1.0 13.014296522402303 -8.769681033376797 24.97844774110709 1.0045617885542801 0.9604643035550567 0.05467555500481491 0.038431359147777885 203.15306376905048 615706.038369147 0.006617645347612613 0.007104252177667463 1.6994913819021285e-09 8.769681033376797 -0.04409748499922339 IACEEEFS(ph)DS(ph)EEEGEGGRK ddPTM_A549_PD325901_60min_R1 2 IACEEEFSDSEEEGEGGRK 19 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 2 IACEEEFS(1)DS(1)EEEGEGGRK;IACEEEFS(1)DS(1)EEEGEGGRK 125.45 2.3427e-15 156085000.0 24554.0 29428.0 29302.0 26189.0 26478.0 27501.0 27015.0 28389.0 23347.0 28138.0 31748.0 True False 27046.704004300576 31908.000837574993 31290.609927240155 27806.63505046557 24618.276624141134 27277.040973927506 28043.07060817523 27822.75912426034 22365.80678137951 26361.361877938867 27843.197267153642 0.9713936134844441 1.1459891093476022 1.1238152582481393 0.9986868527943376 0.8841756350009086 0.9796662614643747 1.0071785340995079 0.9992659556049832 0.8032772445915988 0.9467792662244691 1.0 14.765037266620322 -6.503007105946438 4.306566485017744 0.9243294984409455 1.0853634763772366 0.38130116801374636 0.07158184502760559 0.1645928245024316 7.2165253589591805 0.012735769205111803 0.029302247749607394 3.1404573091478214e-07 6.503007105946438 0.16103397793629115 IACEEEFS(ph)DSEEEGEGGR ddPTM_A549_MK2206_60min_R1 2 IACEEEFSDSEEEGEGGR 18 0 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.982)DS(0.018)EEEGEGGR;IACEEEFS(0.998)DS(0.002)EEEGEGGR 145.1 8.9823e-17 5821700.0 918.8699999999999 917.12 1170.1 839.04 1094.23 973.4 1022.47 610.54 1228.92 1309.6100000000001 1263.48 True False 1073.9527917853784 963.7974906637583 1336.0377746618374 1044.6048376659369 933.2702165177157 1076.4045419093736 1208.2395639339456 697.085914700332 950.5715821819811 1013.7681914363532 949.7230457259714 1.1308062878104062 1.0148195255460273 1.4067656678169431 1.0999046957604757 0.9826761819855818 1.1333878300137137 1.2722020060178316 0.7339886273555437 1.0008934567396552 1.067435602409148 1.0 9.89136305183818 -8.229608943602885 24.999016810557823 0.9804511337090911 1.1445861566992477 0.32528372030594455 0.1346713276359588 677.8051933220504 532336.1011031086 0.020575267359634327 0.026561444591791234 5.893741128948123e-09 8.229608943602885 0.1641350229901566 IACEEEFS(ph)DSEEEGEGGR ddPTM_A549_PD325901_60min_R1 1 IACEEEFSDSEEEGEGGR 18 0 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.94)DS(0.06)EEEGEGGR 171.26 2.6777999999999997e-30 4311800.0 584.23 878.23 886.33 729.03 1098.0 821.15 638.3 994.26 783.43 934.75 1025.9 True False 643.5405995126054 952.2415242484533 946.4816837352657 774.0605273527403 1020.8802678943634 814.4628266514147 662.5908557911624 974.4287043181195 750.5051615512122 875.7297254745665 899.7208037159172 0.7152669993343851 1.0583744649624878 1.0519726562131524 0.8603341438319642 1.1346634018887283 0.9052395179567034 0.7364405191639567 1.0830345372627295 0.8341533934211226 0.9733349744251043 1.0 9.813333571678628 IACEEEFS(ph)DSEEEGEGGRK ddPTM_A549_PD325901_60min_R1 1 IACEEEFSDSEEEGEGGRK 19 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.5)DS(0.5)EEEGEGGRK 120.33 1.5784e-14 52586000.0 10034.0 11995.0 12799.0 10120.0 11382.0 10433.0 11676.0 14073.0 11368.0 11425.0 11607.0 True False 11052.644293359608 13005.860746456157 13667.617106639365 10745.089415812428 10582.567585768349 10348.037107050128 12120.336569352363 13792.302974945072 10890.242493284886 10703.623550197297 10179.412582835213 1.0857840964219154 1.2776631893658552 1.3426724769645404 1.055570675456369 1.03960493787362 1.0165652509752137 1.1906715118110043 1.3549213044180966 1.069830150282767 1.0514971726606328 1.0 13.313366690640647 -8.979457031904706 19.89338378676309 1.0308057411853673 1.1699331142379206 0.21622290398678412 0.1120630738330156 16.156711650193227 15647.149343201196 0.02100468923299277 0.02152763071449419 1.0484385185408672e-09 8.979457031904706 0.1391273730525533 IACEEEFSDS(ph)EEEGEGGR ddPTM_A549_PD325901_60min_R1 1 IACEEEFSDSEEEGEGGR 18 0 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.331)DS(0.669)EEEGEGGR 183.7 1.1480999999999998e-39 4704900.0 650.54 883.41 1014.9 891.43 908.42 646.95 985.91 1203.3 1027.0 684.24 868.79 True False 716.5823418977633 957.8580610276642 1083.777217089482 946.4916065155801 844.615713078868 641.6814536955886 1023.4293445606526 1179.2992375294107 983.8387614887032 641.0369696268713 761.9343377135698 0.9404778160387156 1.2571399051288683 1.4224023822600067 1.2422220126682229 1.1085150928010548 0.8421742162469816 1.343198874107424 1.5477701675295001 1.2912382508459053 0.8413283637413033 1.0 9.573522863691803 -10.801448737091814 1.157235624490436 1.0053265488448517 1.2306216718000034 0.22933586517312976 0.1989006155275575 0.7179391527211834 1.7677097717448083 0.1223505348595146 0.0336618202426138 1.5796150500853357e-11 10.801448737091814 0.22529512295515164 IACEEEFSDS(ph)EEEGEGGRK ddPTM_A549_MK2206_60min_R1 2 IACEEEFSDSEEEGEGGRK 19 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.44)DS(0.56)EEEGEGGRK;IACEEEFS(0.206)DS(0.794)EEEGEGGRK 173.18 1.399e-34 92174000.0 22063.8 25233.3 22405.5 20659.5 29645.8 25752.9 22521.2 22120.0 32771.6 31821.8 32594.9 True False 25787.630031880693 26517.56718986154 25582.936808978542 25721.078427440203 25284.94209155379 28478.0547846085 26613.010520865362 25255.577739658915 25348.8849254915 24633.23327880008 24500.686756524417 1.052526824580277 1.082319342856789 1.0441722333422319 1.0498105087030183 1.0320095245828376 1.1623370017179182 1.0862148798248867 1.0308110132028636 1.0346193630160678 1.0054099104891565 1.0 14.580534568219994 -8.854312311120333 1.3203285742003967 1.012093292960441 1.0713734830271895 0.36943362820236236 0.03415449091048871 0.33028608658439873 1.1454625577760207 0.007405984359850712 0.007605794588966085 1.3985812090393554e-09 8.854312311120333 0.05928019006674856 IACKS(ph)PPPESMDTPTSTR ddPTM_A549_MK2206_60min_R1 3 IACKSPPPESMDTPTSTR 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(0.999)PPPES(0.001)MDTPTSTR;IACKS(0.999)PPPES(0.001)MDTPTSTR;IACKS(0.585)PPPES(0.404)MDT(0.01)PT(0.001)STR 99.07799999999999 1.9292e-07 93060000.0 8061.099999999999 9276.199999999999 9806.6 9008.1 10694.5 9280.6 8789.1 9072.699999999999 13430.400000000001 12872.8 13270.3 True False 9421.616605026946 9748.318958146323 11197.323340739054 11215.084904388978 9121.35321691848 10262.6669320363 10385.96570204686 10358.783008978458 10388.435843941737 9964.825539452124 9974.918268351974 0.9445307070755135 0.9772830910379892 1.1225478785390632 1.1243285010135626 0.9144288676387804 1.0288472201919974 1.0412081004211375 1.0384829960807194 1.0414557357228436 0.9989881893136036 1.0 13.284089305011971 -10.955668467987726 1.2423442970380674 1.0001307522370364 1.0291052909440201 0.02456516010523946 0.06119052109179544 1.7491488255115744 4.835025861179058 0.042412494754125264 0.010059038712401045 1.1074688817071511e-11 10.955668467987726 0.028974538706983743 IACKS(ph)PPPESMDTPTSTR ddPTM_A549_PD325901_60min_R1 3 IACKSPPPESMDTPTSTR 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(1)PPPESMDTPTSTR;IACKS(0.998)PPPES(0.002)MDTPTSTR;IACKS(0.981)PPPES(0.019)MDTPTSTR 125.08 2.6932e-11 144579000.0 34659.8 35624.1 35126.1 35585.9 39562.0 35817.9 37609.9 39178.7 36888.9 39433.7 47638.0 True False 38178.43738080381 38626.26792978982 37509.96837639854 37783.96022155726 36783.301601490704 35526.21089778691 39041.16532542697 38397.25009340442 35338.5878176053 36943.84945220267 41778.828002162816 0.9138226036122262 0.9245416823992815 0.8978224179590848 0.9043805685406314 0.8804292355828292 0.8503400549184332 0.9344724874380362 0.9190600102859914 0.8458491898282997 0.8842720396630118 1.0 15.350484401413938 -10.973458547018643 1.2201667936427358 1.000469030312268 0.8926764284766822 0.0 0.04314014338088759 0.24342614475964444 0.6399394265602628 0.02203169160794484 0.004990437270386739 1.0630200426515647e-11 10.973458547018643 -0.10779260183558592 IACKS(ph)PPPESVDT(ph)PTSTK ddPTM_A549_MK2206_60min_R1 2 IACKSPPPESVDTPTSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 IACKS(0.987)PPPES(0.025)VDT(0.85)PT(0.111)S(0.023)T(0.005)K;IACKS(1)PPPES(0.01)VDT(0.972)PT(0.015)S(0.002)TK 100.88 4.175e-09 22832000.0 1946.29 2501.0 2451.3999999999996 2546.7 2887.6 2178.83 2420.2 2232.2 3527.5 2903.5 3444.8999999999996 True False 2274.776169778058 2628.2902173652956 2799.0453814255425 3170.6416143257075 2462.837865180591 2409.392344409699 2859.9190124237753 2548.6211858257952 2728.5268822599837 2247.5973334316723 2589.4362555967623 0.8784831697870131 1.0150047956131591 1.0809477836636197 1.2244524681666669 0.9511096710171785 0.9304698423072129 1.1044562329898626 0.9842378549837827 1.0537146362891125 0.8679871259907459 1.0 11.33842232860435 IACKS(ph)PPPESVDT(ph)PTSTK ddPTM_A549_PD325901_60min_R1 2 IACKSPPPESVDTPTSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 IACKS(1)PPPES(0.001)VDT(0.889)PT(0.095)S(0.013)T(0.003)K;IACKS(0.997)PPPES(0.003)VDT(0.976)PT(0.019)S(0.004)T(0.001)K 130.29 8.8587e-13 23310500.0 4148.4 4394.8 4506.6 4761.1 4998.6 4337.3 4892.2 4687.1 4592.9 4553.2 4717.200000000001 True False 4569.542514109327 4765.165219551941 4812.444976387293 5055.182333757368 4647.5155802338495 4301.9784668272305 5078.375348114562 4593.612113541184 4399.876385239983 4265.710174946024 4137.014304794545 1.1045508130860242 1.1518367761091393 1.163265249242664 1.2219397762049609 1.1233984796348577 1.039875173223719 1.2275459966935667 1.1103689219100525 1.0635390794130921 1.0311083938004104 1.0 12.014374230734163 -9.085675513355332 0.7582560261937639 1.0110063295871325 1.1507186243664493 0.49208961960061504 0.05106569756777836 0.3012264899157137 0.37149495965534046 0.014897654853787275 0.012533594095805237 8.209647056756563e-10 9.085675513355332 0.1397122947793168 IACKS(ph)PPPESVDTPTSTK ddPTM_A549_MK2206_60min_R1 4 IACKSPPPESVDTPTSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(1)PPPESVDTPTSTK;IACKS(0.75)PPPES(0.25)VDTPTSTK;IACKS(1)PPPESVDTPTSTK;IACKS(1)PPPESVDTPTSTK 191.4 8.807899999999999e-41 494707300.0 18456.5 19768.300000000003 19876.9 16483.0 23261.899999999998 19129.899999999998 17000.1 16229.400000000001 24114.699999999997 25891.1 24470.2 True False 21571.505981898226 20774.42203276385 22695.74330670529 20521.33573994999 19840.105324852586 21154.213320600087 20088.798117141305 18529.96715045301 18652.758953262895 20042.2825278501 18393.57399683703 1.1727740343234914 1.1294391202240648 1.2338952348580035 1.1156796250407264 1.0786432983749816 1.1500871621925015 1.0921639329363497 1.0074152610927836 1.0140910600881827 1.0896350285864282 1.0 14.166914212020306 -7.815955005020085 0.7216258261119831 1.0013669049415137 1.1663560146620318 0.5812411559182442 0.045086950396262454 0.21176440144385614 0.2232556439474928 0.00760210094069216 0.013810272496164802 1.5277243295669066e-08 7.815955005020085 0.16498910972051806 IACKS(ph)PPPESVDTPTSTK ddPTM_A549_PD325901_60min_R1 2 IACKSPPPESVDTPTSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(1)PPPESVDTPTSTK;IACKS(0.997)PPPES(0.003)VDTPTSTK 193.71 1.8766999999999998e-41 603530000.0 19012.1 17882.4 19818.2 19166.5 19561.4 19234.2 20030.2 22108.0 17031.8 20362.6 23484.0 True False 20942.194396031708 19389.412606288264 21163.182228517857 20350.37117472026 18187.474747166474 19077.563052278678 20792.46022194602 21667.038596609516 16316.012675679947 19076.901960896943 20595.616877341447 1.0168277318787937 0.9414339333346113 1.0275575795838785 0.988092335175889 0.8830750181207574 0.9262923837579793 1.0095575357502953 1.052021831909624 0.7922080107068915 0.9262602851136089 1.0 14.330049717824235 -6.921483433328771 0.6346760160235199 0.9151847015959025 0.9987130105321195 0.011205215608892094 0.07207875201399186 1.8076796328330287 1.2685425676022617 0.01843310881096132 0.07464941988342395 1.1981648277177618e-07 6.921483433328771 0.08352830893621699 IACKS(ph)PQPDPVDTPASTK ddPTM_A549_MK2206_60min_R1 2 IACKSPQPDPVDTPASTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(0.974)PQPDPVDT(0.026)PASTK;IACKS(1)PQPDPVDTPASTK 164.58 1.027e-23 99234000.0 12899.2 15102.6 13776.4 11352.0 17045.9 14417.7 13463.3 14060.3 20460.0 19369.2 18448.7 True False 15076.2696048385 15871.257831579802 15730.100674174288 14133.240509610652 14538.470690567196 15943.371444305305 15909.407338222041 16053.390582862856 15825.842667906243 14993.684267506376 13867.37863178264 1.0871751615900358 1.1445030999012655 1.1343240198347564 1.0191717472268829 1.0483935772292594 1.1497033338200413 1.1472541249980206 1.1576369989689397 1.141228136054135 1.0812197939949773 1.0 13.759407478505302 -10.785274774700744 1.0432847052497256 1.0002800945486228 1.11550378354486 0.1960351052206244 0.04880290220747751 0.38179359125743945 0.7406609415068628 0.031954605090191227 0.008122437018226372 1.639552113255954e-11 10.785274774700744 0.11522368899623725 IACKS(ph)PQPDPVDTPASTK ddPTM_A549_PD325901_60min_R1 2 IACKSPQPDPVDTPASTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(1)PQPDPVDTPASTK;IACKS(1)PQPDPVDTPASTK 150.83 8.922299999999999e-18 159093000.0 34059.0 37153.0 39635.0 39305.0 41218.0 36780.0 41262.0 38247.0 33484.0 41803.0 43744.0 True False 37516.64460708937 40284.013698464834 42324.86944461687 41732.78058186832 38322.98987438055 36480.47587437012 42832.24798943279 37484.13358080892 32076.78392374657 39163.55144585541 38363.76531606306 0.9779187287276259 1.0500536995412637 1.1032511823570998 1.0878176382857456 0.998937136609335 0.9509096819309235 1.1164766449944568 0.9770712877631479 0.8361218889616108 1.0208474356779957 1.0 15.227456704082336 -8.52042698944187 24.94794978612341 0.9217701354802081 1.0407361251857252 0.23302218803654673 0.0667301626513909 78.4455249846714 798231.5091678338 0.012466990178816448 0.014259838580094358 3.016984024835726e-09 8.52042698944187 0.11896598970551708 IACRS(ph)PQPDPVGT(ph)PTIFKPQSK ddPTM_A549_PD325901_60min_R1 2 IACRSPQPDPVGTPTIFKPQSK 22 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 IACRS(1)PQPDPVGT(0.983)PT(0.017)IFKPQSK;IACRS(1)PQPDPVGT(0.783)PT(0.184)IFKPQS(0.032)K 78.65 6.682e-05 14941800.0 3348.4 4478.3 5406.5 3788.6000000000004 5382.2 4938.299999999999 4550.8 5220.0 4315.5 4124.9 4489.299999999999 True False 3688.3271030382016 4855.702057595218 5773.4176019256 4022.6132174651166 5004.172839582005 4898.084122088145 4723.9831842933145 5115.8830049892185 4134.134542555501 3864.453110040163 3937.144560017412 0.9368025600314482 1.233305504427235 1.4663971601540755 1.0217082853181614 1.2710157738175287 1.2440701750779715 1.1998500721224274 1.2993891707564311 1.050033718481807 0.9815370127082844 1.0 11.942933969521604 -8.872471278827993 6.14544347676641 1.0219262232783597 1.2148286151724614 0.30917571473495353 0.13209974293658222 0.18053203864412284 9.129440430408886 0.021780565099759838 0.023095819783704123 1.341308637159284e-09 8.872471278827993 0.19290239189410174 IACRS(ph)PQPDPVGTPTIFKPQSK ddPTM_A549_MK2206_60min_R1 2 IACRSPQPDPVGTPTIFKPQSK 22 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACRS(1)PQPDPVGTPTIFKPQSK;IACRS(1)PQPDPVGTPTIFKPQSK 115.63 1.3248e-15 63902000.0 5683.4 6941.700000000001 6510.2 5942.5 7254.0 6724.200000000001 5724.4 5982.799999999999 7990.900000000001 8498.0 7792.5 True False 6642.618974210734 7295.002879602028 7433.444253143738 7398.412766768961 6186.9462093156935 7435.750380837285 6764.449382166209 6830.8802215565665 6180.9739088451615 6578.295897882681 5857.407187940946 1.1340544990429142 1.245432090604997 1.2690673560218744 1.2630866404508452 1.0562602207429241 1.26946106737223 1.1548538739278114 1.1661952127248005 1.055240605701848 1.12307300599246 1.0 12.516046474073475 -8.73488344061363 0.932220085079599 1.013207961098987 1.2107116385534624 0.38864704324607435 0.07119139222684548 0.2191593593361058 0.3822312390255517 0.01394012646409562 0.014737133692418362 1.8412661087141753e-09 8.73488344061363 0.1975036774544754 IACRS(ph)PQPDPVGTPTIFKPQSK ddPTM_A549_PD325901_60min_R1 2 IACRSPQPDPVGTPTIFKPQSK 22 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACRS(1)PQPDPVGTPTIFKPQSK;IACRS(1)PQPDPVGTPTIFKPQSK 130.23 2.0572999999999998e-22 147807000.0 7497.4 7747.2 9972.7 8314.1 8608.9 8434.0 8673.2 9439.3 7005.6 8114.7 9440.7 True False 8258.530528705836 8400.083732800762 10649.50739271681 8827.64307430891 8004.240563092704 8365.316300283783 9003.263372157155 9251.025756512397 6711.178994630241 7602.336457136638 8279.553749528077 0.9974608268201123 1.0145575458435252 1.2862417124019296 1.0661979306326832 0.9667478230392471 1.0103583542483305 1.0874092547162133 1.117333860782013 0.8105725498808155 0.9182060636504668 1.0 13.015337296264423 -8.749684834489255 24.9994853803958 0.9105481445754863 1.0690144918923294 0.3792945488822812 0.0904074991840062 190.66102096031992 405496.27035861264 0.017794294507165954 0.02009720510905801 1.7795703676032478e-09 8.749684834489255 0.15846634731684317 IADGS(ph)VKR ddPTM_A549_MK2206_60min_R1 1 IADGSVKR 8 1 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 1 IADGS(1)VKR 42.718 0.031956 10520000.0 1778.2 2193.4 1742.6 1397.9 2506.3 1620.8 1878.1 2023.2 2410.9 2190.2 2671.9 True False 2078.316687183998 2305.034691231122 1989.7268832798186 1740.385562754115 2137.6265900755343 1792.311980200034 2219.326459479834 2309.9947957901422 1864.8349994161852 1695.4322988400381 2008.3934893114445 1.0348154872263233 1.1477007386741618 0.9907057027763889 0.8665560668346853 1.0643465045330316 0.8924107699704346 1.1050257189594384 1.1501704263053045 0.9285207352746017 0.8441733693437228 1.0 10.971826237946546 -5.83370897491922 8.791292288500603 0.9831952642304068 1.0909316373655105 0.16219884362292414 0.09542438668571693 0.31276975081056685 34.45346770757722 0.011731365982511486 0.03672511912820249 1.4665302483619728e-06 5.83370897491922 0.10773637313510365 IADGS(ph)VKR ddPTM_A549_PD325901_60min_R1 2 IADGSVKR 8 1 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 1 IADGS(1)VKR;IADGS(1)VKR 85.29 0.001257 29523000.0 8792.0 8430.4 8089.200000000001 8858.0 10584.0 8659.0 8409.8 8393.5 9306.2 9160.5 10294.0 True False 9684.557367671689 9140.85939449137 8638.181756311202 9405.138542022383 9840.616352817802 8588.483974882301 8729.839541019133 8226.085057926632 8915.092777182246 8582.104466659293 9027.903259042443 1.0727360595021367 1.012511890325784 0.9568314489479168 1.0417854813189427 1.0900223529711992 0.9513265404433732 0.966984170136652 0.9111844491341108 0.9875042433859484 0.9506198970467885 1.0 13.140175243682808 -7.2868627235195085 24.99497055489452 0.982119386145462 1.0295994898648264 0.38952858108893873 0.04133821979939999 884.1878598729488 869286.9953210873 0.006392992123150036 0.010221465468238619 5.165796295249696e-08 7.2868627235195085 0.0474801037193644 IADGS(ph)VKREDIFYTSK ddPTM_A549_MK2206_60min_R1 2 IADGSVKREDIFYTSK 16 2 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 1 IADGS(1)VKREDIFYTSK;IADGS(1)VKREDIFYTSK 112.55 9.679999999999999e-08 16884700.0 6200.4 7121.5 7183.9 7215.0 9524.4 6517.299999999999 5929.0 6022.0 10149.1 10145.599999999999 10036.1 True False 7246.875934774294 7483.953931614129 8202.685043494714 8982.675323893653 8123.373376896388 7206.956360166392 7006.222553780907 6875.636941601532 7850.345054782365 7853.70191357478 7543.859387731045 0.9606324246393365 0.992059043914002 1.0873327062319256 1.1907267702394646 1.0768192988999552 0.955340759914935 0.9287318590767315 0.9114216726764186 1.0406271712261463 1.0410721501977684 1.0 12.88108707009799 -7.24191534571614 24.134378611801818 0.9991234467883016 1.0662682980733362 0.2386944696708444 0.06792871937137147 786.3773948981669 972069.7339754684 0.010946508631162285 0.01893979518522767 5.7290769338546465e-08 7.24191534571614 0.06714485128503467 IADGS(ph)VKREDIFYTSK ddPTM_A549_PD325901_60min_R1 3 IADGSVKREDIFYTSK 16 2 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 1 IADGS(1)VKREDIFYTSK;IADGS(1)VKREDIFYTSK;IADGS(1)VKREDIFYTSK 106.73 2.556e-07 23690800.0 13808.099999999999 13610.6 13958.9 13456.599999999999 16537.9 16023.4 16282.099999999999 17519.6 16263.7 15643.099999999999 16321.8 True False 15209.888147014035 14757.613028404854 14906.23489568468 14287.783619844018 15376.334956657734 15892.910742941329 16901.724225407 17170.157834139674 15580.193247540232 14655.39199633186 14314.322072414898 1.062564337316748 1.0309683513999046 1.041351090207091 0.9981460209965499 1.0741923284155692 1.1102803655346365 1.1807561783158618 1.199508977601409 1.0884338894096 1.023827179673024 1.0 13.805171725337303 -4.941228132067424 13.209524199173831 1.0635636730161653 1.0566450196303785 0.0 0.06507604431085323 16185746.325516876 113166517.36442935 0.010209651325816721 2827016.319211217 1.1449113689607704e-05 4.941228132067424 -0.006918653385786788 IADGSVK ddPTM_A549_MK2206_60min_R1 2 IADGSVK 7 0 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 111.65 0.022300999999999998 72094000.0 10928.3 10762.0 11057.0 9959.400000000001 13180.3 10105.7 10582.2 10259.2 14532.3 14903.800000000001 13940.2 False True 12772.729868717168 11309.739831781404 12625.048862862952 12399.453447094462 11241.49532983783 11175.078466379253 12504.84876178451 11713.473017482309 11240.75725331446 11537.021228861355 10478.463610052546 1.2189506347537067 1.0793318803847705 1.2048568695463209 1.1833274331552774 1.0728190456331086 1.066480629436782 1.1933857125569387 1.1178616878761647 1.0727486081576505 1.10102221644338 1.0 13.355139578805652 -9.605804253721754 0.22350574753105856 0.944275855378857 1.1863174897551378 0.23653967773527718 0.058980686022658456 1.8225825713173494 0.2384168175575229 0.1480743732490417 0.0687205441796441 2.4785389390861263e-10 9.605804253721754 0.2420416343762808 IADGSVK ddPTM_A549_PD325901_60min_R1 4 IADGSVK 7 0 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ;;; 117.16 0.019502000000000002 113457000.0 25051.9 23182.8 23864.3 23379.0 30572.0 25679.9 25310.4 26461.0 27653.8 26790.6 28919.1 False True 27595.150445765965 25136.495916043667 25483.874905693705 24823.06773243861 28424.728187674395 25470.77140854371 26273.601122382326 25933.21459674708 26491.60695467995 25099.036943887582 25362.23403327903 1.0880409986579658 0.9910994387584642 1.0047961418641222 0.9787413719101813 1.1207501732842982 1.0042794879631765 1.0359340225276468 1.0225130232107644 1.044529709800762 0.9896224800604673 1.0 14.630394210467557 -5.2418131958096135 23.15176302655899 1.0225451568506945 1.0880411668990544 0.21347513581091593 0.037483649232834496 1813.9723027348516 2139735.7325870455 0.004764373293644996 0.21455614533305414 5.730424621951255e-06 5.2418131958096135 0.06549601004835992 IADGSVKR ddPTM_A549_MK2206_60min_R1 2 IADGSVKR 8 1 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 71.37899999999999 0.0062165 8814300.0 3042.5 3949.2 3932.3 3588.2 5009.9 2631.6000000000004 3409.3999999999996 1869.85 5454.299999999999 6145.700000000001 5719.6 False True 3555.9996180167086 4150.19741160297 4489.959269551951 4467.309161080421 4272.9503465743965 2910.0741652852976 4028.8438480115747 2134.9069636754607 4218.909758727323 4757.382101625982 4299.265467070523 0.827117944972989 0.9653270874735895 1.0443549727138308 1.0390866056764811 0.9938791589638549 0.6768770590172914 0.9371005067888466 0.496574817262951 0.9813094332139591 1.1065569544528764 1.0 12.069874479933691 -4.348393211609733 15.842727561489701 0.9376131367354336 0.9117286646720274 0.0 0.17442780872105873 0.0 0.0 0.021954215163019958 0.0 4.483392783002834e-05 4.348393211609733 -0.02588447206340616 IADGVNEINTENMVSSIEPEKQDS(ph)PPPKPPR ddPTM_A549_MK2206_60min_R1 7 IADGVNEINTENMVSSIEPEKQDSPPPKPPR 31 2 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 IADGVNEINTENMVSSIEPEKQDS(1)PPPKPPR;IADGVNEINTENMVS(0.021)S(0.034)IEPEKQDS(0.945)PPPKPPR;IADGVNEINTENMVS(0.001)S(0.001)IEPEKQDS(0.998)PPPKPPR;IADGVNEINTENMVSSIEPEKQDS(1)PPPKPPR;IADGVNEINTENMVSSIEPEKQDS(1)PPPKPPR;IADGVNEINTENMVS(0.001)S(0.006)IEPEKQDS(0.992)PPPKPPR;IADGVNEINTENMVS(0.005)S(0.005)IEPEKQDS(0.99)PPPKPPR 217.37 4.065999999999998e-91 146628000.0 9309.320000000002 11156.769999999999 11074.869999999999 8850.59 14463.0 11046.3 10731.830000000002 9877.88 16942.5 13925.129999999997 13852.400000000001 True False 10880.505624977912 11724.60193858241 12645.45309757212 11018.98494731809 12335.51185902025 12215.212134059493 12681.664595942417 11278.099739738786 13105.050801612986 10779.4334615772 10412.466773209266 1.044949853090805 1.1260157841510907 1.2144531524564586 1.0582492302082886 1.1846867920634214 1.1731333602416478 1.2179308584755035 1.0831342836797087 1.2585923285087064 1.0352430117051725 1.0 13.346024271423326 -2.001497835746785 13.565900470933476 1.1326459605519648 0.0006859454756797945 0.0 0.08365460763864964 0.0 0.0 0.012911671280254403 0.0 0.009965570463420472 2.001497835746785 -1.131960015076285 IADGVNEINTENMVSSIEPEKQDS(ph)PPPKPPR ddPTM_A549_PD325901_60min_R1 4 IADGVNEINTENMVSSIEPEKQDSPPPKPPR 31 2 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 IADGVNEINTENMVSSIEPEKQDS(1)PPPKPPR;IADGVNEINTENMVSSIEPEKQDS(1)PPPKPPR;IADGVNEINTENMVS(0.001)S(0.006)IEPEKQDS(0.993)PPPKPPR;IADGVNEINTENMVS(0.001)S(0.006)IEPEKQDS(0.994)PPPKPPR 261.1 3.897199999999999e-140 336236000.0 14381.199999999999 15061.0 17942.399999999998 16356.2 19635.8 18590.5 16605.3 18708.2 18250.4 19678.5 18621.9 True False 15841.168837120107 16330.243326584103 19160.079160416117 17366.48532637463 18256.649147832555 18439.105131660628 17237.223778268824 18335.050274701014 17483.3991554756 18435.996151646174 16331.524353950124 0.9699749082692691 0.9999215610656875 1.1731960070084853 1.0633719761850753 1.1178778387221888 1.129049850585487 1.0554571272521562 1.1226784393990934 1.0705307585845083 1.1288594837864623 1.0 13.995371835191717 -10.254429930662521 0.832852737364179 1.0031753685041696 1.0809722087391906 0.0 0.06687223815096581 0.680063775646345 0.9104974026014214 0.02911196413945503 0.01092496375459663 5.566344347541677e-11 10.254429930662521 0.07779684023502109 IADGYEQAAR ddPTM_A549_PD325901_60min_R1 1 IADGYEQAAR 10 0 E7ENZ3;B7ZAR1;E9PCA1;P48643-2;P48643 E7ENZ3 CCT5 T-complex protein 1 subunit epsilon 0 91.867 2.876e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IADLTLQNS(ph)AIK ddPTM_A549_PD325901_60min_R1 1 IADLTLQNSAIK 12 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 IADLTLQNS(1)AIK 64.104 0.006642100000000001 1098600.0 1538.3 1300.7 1416.6 1431.2 1983.4 2133.4 1789.1 1972.5 1613.5 2020.5 2156.8 True False 1694.4670835633938 1410.3145538070467 1512.7389947078136 1519.601973508968 1844.0928263585424 2116.026297726517 1857.1851795330858 1933.1569401036859 1545.6902060973935 1892.925285179314 1891.5272730816753 0.8958195357145281 0.7455956749221823 0.7997447439619837 0.8033730177377951 0.9749226736520417 1.1186866443004484 0.9818442514483868 1.0220084942017187 0.8171651702273136 1.000739091694597 1.0 10.885335862770772 -6.754256656886406 24.65771276836471 0.9446903597503252 0.8056384840329994 0.4768605357337711 0.08134557826511683 136.37064734933693 468144.3809950794 0.014176374991524972 0.02902404028394381 1.7609350714396283e-07 6.754256656886406 -0.1390518757173258 IADPEHDHTGFLT(ph)EY(ph)VATR ddPTM_A549_MK2206_60min_R1 3 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 2 IADPEHDHT(0.001)GFLT(0.998)EY(0.861)VAT(0.14)R;IADPEHDHT(0.039)GFLT(0.961)EY(0.997)VAT(0.004)R;IADPEHDHT(0.063)GFLT(0.92)EY(0.867)VAT(0.15)R 114.63 4.7948e-14 12429800.0 863.67 1195.05 905.42 836.8399999999999 1253.6599999999999 1054.6299999999999 853.6199999999999 889.12 1289.8400000000001 1429.75 1320.19 True False 1009.4363812958063 1255.872940528746 1033.822170698505 1041.865837567175 1069.24827471336 1166.2302465932642 1008.7117045637472 1015.155482815802 997.6932994512317 1106.7684819954993 992.3503876095938 1.017217702436102 1.2655539376106197 1.041791471648245 1.0498971437667854 1.0774906606213963 1.1752202257939535 1.0164874394754508 1.0229808901079203 1.0053840981052147 1.1153000954244796 1.0 9.954705799512546 -7.891445093453164 8.28200600441997 1.0048963215371016 1.1051608897842211 0.15493574524644238 0.07308554230721227 0.1976472381777758 13.945742818834374 0.009465249937711253 0.013095460609444463 1.283970088693147e-08 7.891445093453164 0.10026456824711949 IADPEHDHTGFLT(ph)EY(ph)VATR ddPTM_A549_PD325901_60min_R1 1 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 2 IADPEHDHT(0.002)GFLT(0.983)EY(0.958)VAT(0.057)R 86.98700000000001 4.83e-06 3845600.0 1545.3 1384.4 1270.2 1405.7 1480.7 1546.3 1400.4 1557.1 1883.6 3172.8 2998.4 True False 1702.1777184102646 1501.0682465522232 1356.4034103330973 1492.5268964236698 1376.7007401376907 1533.7074454741319 1453.6929883282833 1526.0424189786804 1804.4388423954456 2972.4688665265635 2629.6158084236336 0.647310421909375 0.5708317700797757 0.5158180925091926 0.5675836339447585 0.5235368359619714 0.5832439250483279 0.5528157321200938 0.5803290404971712 0.6861986593688552 1.1303814256837994 1.0 11.3606363192481 -9.987959061825944 0.5382867862361981 1.0155211092193834 0.5528151809047894 0.9066547865135136 0.05944801051164497 0.14746265747568627 0.08323061274846127 0.031050432723418286 0.010637537995520717 1.0281132072411625e-10 9.987959061825944 -0.462705928314594 IADPEHDHTGFLT(ph)EYVAT(ph)R ddPTM_A549_MK2206_60min_R1 1 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 2 IADPEHDHTGFLT(0.996)EY(0.448)VAT(0.556)R 116.48 1.668e-13 6844400.0 789.66 762.66 727.28 600.51 758.74 778.39 572.22 812.81 1030.6 1048.0 1161.9 True False 922.9353026665817 801.4761364157604 830.4192400273997 747.634976957918 647.1303510968006 860.7587131465351 676.1849670643467 928.0283066262282 797.170745530018 811.2560721323895 873.3681631913495 1.056754003138963 0.9176841682516906 0.9508238049266516 0.8560364442711152 0.7409594010527476 0.9855622742203717 0.7742267185393141 1.062585454495097 0.9127545279611514 0.928882121335866 1.0 9.770446131422887 -10.556039427600435 0.5051891248328622 1.0128972294145517 0.9079481196656952 0.017477936470664757 0.09813286183346494 2.559423674056772 0.9567866368128817 0.12905359325223442 0.023000265638660786 2.779460921819288e-11 10.556039427600435 -0.10494910974885652 IADPEHDHTGFLT(ph)EYVATR ddPTM_A549_MK2206_60min_R1 4 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHT(0.002)GFLT(0.998)EYVATR;IADPEHDHT(0.001)GFLT(0.999)EYVATR;IADPEHDHT(0.002)GFLT(0.944)EY(0.05)VAT(0.004)R;IADPEHDHT(0.007)GFLT(0.993)EYVATR 172.61 3.1988999999999993e-34 55016000.0 3884.0699999999997 3627.27 3546.29 3348.64 4817.64 3943.7700000000004 3352.76 4038.15 5314.73 4885.92 4481.67 True False 4539.606059605638 3811.8825496771724 4049.207247163086 4169.056950326162 4108.971537889116 4361.097123737345 3961.9130931716104 4610.570128815715 4110.952140879831 3782.187278581188 3368.747651200426 1.3475648904684165 1.1315429187219883 1.2019918576329645 1.2375687887576121 1.2197326613125554 1.2945751879584402 1.1760789181581515 1.368630306034581 1.2203205958199115 1.1227279898016214 1.0 11.717996646634042 -10.376056054033626 0.7907431145015497 1.002283418932839 1.2410561606716586 0.4383949258802534 0.0753744350653482 0.2984185248186568 0.34516152461449146 0.04034133889282437 0.012797209785689665 4.2067232904683754e-11 10.376056054033626 0.23877274173881968 IADPEHDHTGFLT(ph)EYVATR ddPTM_A549_PD325901_60min_R1 2 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHT(0.002)GFLT(0.997)EY(0.001)VATR;IADPEHDHTGFLT(1)EYVATR 116.45 2.8536e-14 13591300.0 0.0 152.45 144.17 326.8 343.7 165.91 301.76 326.93 476.43 1019.59 584.66 True False 0.0 165.29749652332157 153.95424316463763 346.9856937833501 319.55969770063075 164.5588839672852 313.2436419294081 320.40912467837666 456.4073039299539 955.2129133956819 512.750526465102 0.0 0.32237411370960684 0.30025175054620995 0.6767144563955237 0.6232264643464586 0.32093362263663155 0.6109084745147065 0.6248830730360719 0.8901157197758961 1.8629194200558155 1.0 9.002113257763522 -7.213106309194229 0.272153894311897 1.06142408493731 2.364600869465205e-15 0.6068976600431368 0.29375991096821574 1.0312597080710888 0.13975073886469108 0.10608532746982852 0.3602291454235463 6.122005152872506e-08 7.213106309194229 -1.0614240849373076 IADPEHDHTGFLTEY(ph)VATR ddPTM_A549_MK2206_60min_R1 2 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHTGFLTEY(0.999)VAT(0.001)R;IADPEHDHTGFLTEY(0.999)VAT(0.001)R 143.67 2.364e-21 31270000.0 1442.85 1244.6799999999998 1455.63 1378.98 1972.8899999999999 1512.08 1180.7 1504.49 2257.6 1799.43 2216.7 True False 1686.3678057043246 1308.0288955418773 1662.06022214427 1716.8301619047656 1682.6804944715798 1672.0873019625299 1395.217906771652 1717.7560648073893 1746.257204646389 1392.9375132415894 1666.2322121923269 1.012084506207874 0.7850219711098086 0.9974961532867213 1.0303666855929192 1.0098715426090648 1.0035139698580784 0.8373490180794844 1.0309223721868097 1.04802751493369 0.8359804252066686 1.0 10.702373758614657 -5.765080624657846 0.3834158871626193 1.0189779852574652 0.8668716770643882 0.0 0.09560425139329103 5.779042587591521 0.7384324371494564 0.021417081343440347 0.37655656662330483 1.7175894954239156e-06 5.765080624657846 -0.15210630819307702 IADPEHDHTGFLTEY(ph)VATR ddPTM_A549_PD325901_60min_R1 4 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHTGFLT(0.002)EY(0.995)VAT(0.003)R;IADPEHDHTGFLTEY(0.999)VAT(0.001)R;IADPEHDHTGFLT(0.002)EY(0.994)VAT(0.004)R;IADPEHDHTGFLT(0.022)EY(0.869)VAT(0.109)R 182.09 1.0395999999999999e-43 41693600.0 2403.17 2671.0600000000004 2030.2200000000003 2108.6400000000003 3166.28 2957.2 2945.6400000000003 4595.65 5912.459999999999 7758.420000000001 8786.029999999999 True False 2647.1380492797516 2896.1596002858873 2168.0029379046305 2238.8859037310986 2943.8914158730104 2933.1175436565336 3057.7379421160563 4503.986155532318 5663.979867333493 7268.55203713976 7705.4040092330215 0.3435430570684952 0.37586083699382355 0.2813613582502378 0.29056048210429297 0.3820554266000179 0.3806572037159787 0.3968303204416165 0.5845230373560432 0.7350659174452907 0.9433057667618981 1.0 12.911654886676176 -8.844605859418138 0.613934938725277 0.961238243361892 0.3104185085382052 0.9704195504326959 0.042608551183907314 0.08188891360106072 0.06808657659664431 0.01674507156843898 0.015680439158900387 1.4301913287383578e-09 8.844605859418138 -0.6508197348236868 down IAEFTTNLTEEEEKS(ph)KSLAK ddPTM_A549_PD325901_60min_R1 1 IAEFTTNLTEEEEKSKSLAK 20 2 P35579 P35579 MYH9 Myosin-9 1 IAEFTTNLT(0.002)EEEEKS(0.534)KS(0.464)LAK 49.902 0.0030142 5025000.0 1685.1 1649.7 1968.0 1937.0 2661.2 2680.9 2027.2 2163.7 2349.3 2596.3 2557.0 True False 1856.1701114949442 1788.7260086226524 2101.5603145453756 2056.644090753821 2474.2864926416023 2659.0676392495634 2104.346205326405 2120.543306110186 2250.5670909108185 2432.3691749126715 2242.505210158495 0.8277216494688787 0.7976463111522624 0.9371484645945781 0.9171189798968011 1.1033581912912147 1.1857576192929453 0.9383907764377836 0.9456135470741275 1.0035950332314962 1.084666008308073 1.0 11.130895621717924 -6.055447529381724 1.7609472264308987 1.0108281221668332 0.8094154713412975 0.5346281415289069 0.07542591488282291 0.23349084124552716 1.3513348355678054 0.010625965833391864 0.04651305982318455 8.801414422484923e-07 6.055447529381724 -0.2014126508255356 IAEFTTNLTEEEEKSK ddPTM_A549_PD325901_60min_R1 2 IAEFTTNLTEEEEKSK 16 1 P35579 P35579 MYH9 Myosin-9 0 ; 139.6 4.3826000000000003e-11 3639800.0 3214.4 3780.3 3760.1000000000004 3947.0 5324.200000000001 5147.1 4699.7 5197.7 5081.0 5022.7 4707.9 False True 3540.723521683788 4098.879147964006 4015.2829973181224 4190.797225712617 4950.246559492871 5105.183724115565 4878.549655274516 5094.027795983228 4867.46323965346 4705.565864820653 4128.858145836987 0.8575551391257655 0.9927391552787522 0.9724923587812336 1.0150015034878543 1.1989383952277621 1.23646382214971 1.1815735690007714 1.2337618818702685 1.1788884644925832 1.139677290576123 1.0 12.011527137709221 -6.546959915162418 4.302909263142407 1.1235165448177564 0.9510487999437199 0.6097401793698766 0.07621760012238725 0.1702613711815483 7.364141052294315 0.014588388694149723 0.03240160404664594 2.838180976907554e-07 6.546959915162418 -0.1724677448740365 IAEKGS(ph)TIETEQKEDKGEDSEPVTSK ddPTM_A549_PD325901_60min_R1 1 IAEKGSTIETEQKEDKGEDSEPVTSK 26 3 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 IAEKGS(0.494)T(0.494)IET(0.012)EQKEDKGEDSEPVTSK 40.545 0.015763 3031200.0 964.76 979.85 765.66 1066.6 1631.5 1502.0 1515.0 1579.8 1576.9 1054.3 1544.6 True False 1062.7017249812252 1062.4253982838738 817.6222918876082 1132.4814595756459 1516.9090683694483 1489.768209986513 1572.6541540398102 1548.2896496708752 1510.628376817465 987.731318072036 1354.6239920261287 0.7844994118196065 0.784295424071731 0.6035787766202781 0.8360116654081836 1.1198008283469036 1.0997651147151524 1.1609525324349017 1.1429663572952655 1.1151643450209372 0.7291553404385474 1.0 10.403676737629237 -6.630837995983027 4.238550946369578 1.077600860577737 0.728394904383086 0.5849988557498096 0.12267692629404774 0.06535056891463849 2.1083614186294826 0.010725994774378236 0.023040993577099544 2.3397098532622124e-07 6.630837995983027 -0.349205956194651 IAEPS(ph)VCGR ddPTM_A549_PD325901_60min_R1 2 IAEPSVCGR 9 0 A0A3B3ITP6;A0A3B3IT92;P33991;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 IAEPS(1)VCGR;IAEPS(1)VCGR 68.76 0.0043164 15599700.0 9489.5 10283.3 10014.099999999999 10606.0 11875.7 11902.3 10700.900000000001 10814.7 10735.400000000001 11187.3 12381.2 True False 10452.867054199318 11149.909780244483 10693.717045675226 11261.108532026345 11041.591800940889 11805.371614994987 11108.12860525716 10598.99232453198 10284.228471359134 10480.931968763436 10858.390890893366 0.9626534133124504 1.0268473379048828 0.98483441544214 1.0370881510142287 1.0168718286059464 1.0872118837511944 1.0229995140968116 0.9761107728605593 0.9471226975245691 0.9652380425495186 1.0 13.406522705000338 -8.267261083012789 9.21205328836909 0.974401904110021 1.0218713868999725 0.34433652402373094 0.03150253230834439 0.13994519818874482 158.47955655452918 0.005551075577476077 0.0068815339702196915 5.404293376064431e-09 8.267261083012789 0.047469482789951445 IAFDAESEPNNS(ph)SGSMEK ddPTM_A549_PD325901_60min_R1 1 IAFDAESEPNNSSGSMEK 18 0 H7C0N5;H7C0S6;H7C3P3;Q92556 H7C0N5 ELMO1 Engulfment and cell motility protein 1 1 IAFDAESEPNNS(0.804)S(0.061)GS(0.134)MEK 88.311 2.5155000000000003e-06 3392100.0 1067.1 1334.2 1038.9 1453.8 1599.4 1342.8 1108.1 1692.8 1779.8 1428.9 1172.4 True False 1175.4312064424994 1446.6377163753068 1109.4060014132067 1543.5979241806433 1487.0636616304594 1331.8646820039207 1150.2693518755862 1659.0357760240893 1705.0011954212207 1338.6790101423996 1028.2022324559323 1.143190677222029 1.4069583499346352 1.0789764565705267 1.5012590669966284 1.446275464777493 1.2953333886687541 1.118718979172111 1.613530610667288 1.6582352591753349 1.301960808765093 1.0 10.005908334278454 -4.305256327140105 1.2017548560177065 1.3356410988385379 4.02747424246185e-13 0.06479847625672497 0.20409440848779803 43.88510697962969 9.003252899839488 0.03867991922017884 125.83589822653282 4.9515785492379666e-05 4.305256327140105 -1.335641098838135 IAGEASR ddPTM_A549_MK2206_60min_R1 2 IAGEASR 7 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;P57053;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST2H2BD;HIST2H2BC Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 138.25 0.015218 291510000.0 11070.8 11799.9 9861.3 8117.9 12286.7 8951.5 9563.7 9102.599999999999 13765.2 14488.0 13764.0 False True 12939.280384926664 12400.46450855207 11259.780623256787 10106.78586442638 10479.342706093072 9898.741788475203 11301.300495462057 10392.921425543364 10647.40417850748 11215.150737647004 10346.018932925153 1.2506530742707922 1.1985735372171853 1.0883201254758659 0.9768767996608397 1.0128864806871394 0.9567681880973041 1.0923332509567345 1.0045333855391418 1.02913055229613 1.0840063999840486 1.0 13.336788116297727 -5.817783468954465 2.323760012305243 1.012911112345443 1.2432177672961877 0.8006575041828198 0.0393132982035823 0.0723324017208262 0.7537978854868321 0.004374944307384142 0.021287114860130147 1.5213058351027612e-06 5.817783468954465 0.23030665495074465 IAGEASR ddPTM_A549_PD325901_60min_R1 2 IAGEASR 7 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;P57053;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST2H2BD;HIST2H2BC Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 138.25 0.015218 437060000.0 19568.5 20963.8 18646.3 19043.6 21474.9 19421.8 18442.4 20446.8 21074.6 20992.8 23570.0 False True 21555.079714431693 22730.49299846249 19911.75004731068 20219.879920846408 19966.577108383117 19263.635300077258 19144.235624068515 20038.972533795702 20188.90785089565 19667.311025346346 20671.03942254036 1.0427670942820295 1.0996298992916842 0.9632679634676848 0.9781743195167053 0.9659203245779177 0.9319142064559934 0.9261380249312973 0.969422588007092 0.9766759879951186 0.9514427708894252 1.0 14.335323314613804 -5.7672416195052625 24.99896899053124 0.9759374885467128 1.0711985052843116 0.7017915626691269 0.026150928947906073 59.44647793626794 256130.4691983591 0.004026479432971061 0.013023927837164826 1.7090642135712915e-06 5.7672416195052625 0.09526101673759879 IAGPGLGSGVR ddPTM_A549_PD325901_60min_R1 2 IAGPGLGSGVR 11 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 64.42 0.017215 7871500.0 10824.4 10652.9 11356.6 10807.7 12344.0 12652.6 12468.3 13111.9 12008.2 12462.099999999999 13594.8 False True 11923.285119497885 11550.657269355797 12127.327168783544 11475.267082932418 11477.000024488174 12549.56142055616 12942.78797941555 12850.372868413438 11503.537113640361 11675.240879204706 11922.72578453762 1.0000469133460228 0.9687933345188269 1.0171606214839954 0.9624701004039274 0.9626154481697884 1.0525748597549287 1.0855561230973567 1.0778049500290334 0.9648412050673095 0.9792425901756565 1.0 13.54142648332583 -4.928946101369305 20.079284527304438 0.9981074319320579 1.051854494184591 0.0 0.04490779972573048 1066419.384972289 3120889.9325112137 0.0065407738536974675 2580836.1504276865 1.177752130773254e-05 4.928946101369305 0.05374706225253323 IAGS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 IAGSSPR 7 0 P42695;E9PKK4;G3V1A9 P42695 NCAPD3 Condensin-2 complex subunit D3 1 IAGS(0.885)S(0.115)PR 64.734 0.025554 422060000.0 2938.4 2902.9 2844.1 2863.6 3421.8 2830.8 2916.0 2490.5 3068.3 3225.8 3361.1 True False 3236.7042048642506 3147.537570728437 3037.117728962652 3040.478068292539 3181.464572569156 2807.7469033487496 3026.969975696425 2440.8250237405464 2939.3500213006714 3022.122437481528 2947.706007768367 1.098041730190955 1.067792229765599 1.030332645439759 1.0314726299975918 1.0793018585248133 0.9525193136456723 1.0268900520334003 0.8280422190367732 0.9971652578494348 1.0252455399273348 1.0 11.525376927722956 -7.256538727145129 24.95096445580285 0.9838804512456246 1.0583567115350476 0.39001738814876097 0.054670110779449776 388.80097490170346 1979520.9424594247 0.007900565447016707 0.013402103171176412 5.53938145660775e-08 7.256538727145129 0.074476260289423 IAGSSPR ddPTM_A549_PD325901_60min_R1 1 IAGSSPR 7 0 P42695;E9PKK4;G3V1A9 P42695 NCAPD3 Condensin-2 complex subunit D3 0 79.307 0.012637 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IAHFLDR ddPTM_A549_PD325901_60min_R1 1 IAHFLDR 7 0 P60228;E5RIP5;E5RJ25;E5RII3;H0YBR5;E5RHS5 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 0 64.757 0.027448 2452800.0 235.85 265.86 168.24 182.13 268.81 205.94 234.08 207.33 232.91 228.48 249.72 False True 259.7933183764065 288.264955235751 179.65777810930595 193.3797564527587 249.9297129441565 204.26289291918937 242.98804249349087 203.19464050276142 223.1216026663426 214.05373380735918 219.00602310550622 1.1862382353349752 1.3162421341118975 0.820332589769715 0.8829883019226277 1.1412001797948397 0.9326816222802496 1.1095039261839448 0.9278038915161357 1.0187920839001479 0.9773874287660058 1.0 7.774826737158041 -5.745244395981035 24.999996696710845 0.9962661086747369 1.2512402864842973 0.5535351805792894 0.09325995813534037 128.96660526517715 199080.84480846138 0.011685934359698929 0.04497824948303348 1.797858898715037e-06 5.745244395981035 0.25497417780956044 IAIEDPYS(ph)VKR ddPTM_A549_MK2206_60min_R1 1 IAIEDPYSVKR 11 1 Q5VYS8-4;Q5VYS8-6;Q5VYS8 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 IAIEDPY(0.022)S(0.978)VKR 40.725 0.040524 2621100.0 970.88 1151.1 1093.2 648.22 1515.4 1158.3 920.3 946.12 1430.4 1654.7 1145.3 True False 1134.7408082629624 1209.686073254375 1248.2321983252025 807.033929099702 1292.4866674382408 1280.8705371826873 1087.5065974438473 1080.23540737098 1106.4166838794272 1280.9021207609403 860.8904013280422 1.318101359374513 1.4051568833712949 1.44993160151354 0.9374409656034506 1.5013370638636483 1.4878439058058583 1.263234664675339 1.2547885371988907 1.2852003950475308 1.48788059291284 1.0 9.749685771734889 -10.5548033412378 0.4471515117488938 0.9298431072652895 1.3433593914070185 0.0 0.2062612138351418 1.2996856224712594 0.36857810612429126 0.24000970141303452 0.04051574784944775 2.7873830755532048e-11 10.5548033412378 0.41351628414172903 IAIEDPYS(ph)VKR ddPTM_A549_PD325901_60min_R1 1 IAIEDPYSVKR 11 1 Q5VYS8-4;Q5VYS8-6;Q5VYS8 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 IAIEDPY(0.012)S(0.988)VKR 51.211000000000006 0.01047 4232800.0 1615.7 2102.3 1774.6 1676.5 1802.2 2336.3 1711.0 2123.2 2410.4 2100.5 2159.5 True False 1779.7246745845246 2279.468199022493 1895.0350275366986 1780.053597392246 1675.6196892524779 2317.2739473977977 1776.1130412951256 2080.851110381822 2309.099270391792 1967.874071526428 1893.8951901983835 0.939716560766016 1.203587300300246 1.0006018481615109 0.9398902360620005 0.8847478455642303 1.2235492013446982 0.9378095738809494 1.0987150298237227 1.2192328711442137 1.0390617610261186 1.0 10.887140777683296 -7.259164402681602 24.999668452477955 1.0992278674288087 1.0027617144999037 0.14343167221094522 0.10936578973182758 340.678430346673 3743709.8651424567 0.01787789570030256 0.03003697358178101 5.505992269715042e-08 7.259164402681602 -0.09646615292890504 IAIS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 IAISPLK 7 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 IAIS(1)PLK;IAIS(1)PLK 59.8 0.029432999999999997 3724500.0 1962.9 2537.28 3079.9 2644.2200000000003 4061.1 3265.1000000000004 2882.5 3229.9 4408.0 3590.1 2839.3 True False 2294.1895317025464 2666.4167144008857 3516.6761321092126 3292.0540187035454 3463.717569706638 3610.6107148020296 3406.212938315649 3687.7482161539047 3409.5950381295575 2779.0939165672635 2134.22344930648 1.0749528276657478 1.2493615489359107 1.647754424801191 1.542506722889445 1.6229404521031667 1.6917678961756815 1.5959963983258194 1.7279110195102794 1.5975810964112087 1.30215695899618 1.0 11.059495516274296 -10.662167101579119 0.9345332617311487 1.00064828437415 1.5386973026666024 0.2984407572009754 0.20527042426399975 0.3761195735687248 0.5859700579548998 0.13434019701492808 0.035967471988645 2.1768720257132613e-11 10.662167101579119 0.5380490182924524 IAKEEIFGPVQQIMK ddPTM_A549_MK2206_60min_R1 4 IAKEEIFGPVQQIMK 15 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;;; 106.19 1.4238999999999998e-06 44953200.0 7640.3 9196.8 9533.7 8844.4 12964.600000000002 9704.4 8941.7 8394.8 13813.3 12671.1 12811.699999999999 False True 8929.7958525992 9664.877837291142 10885.722017172515 11011.278397040205 11057.524514101768 10731.313166740634 10566.291146760466 9584.788607996774 10684.609605307402 9808.689709538858 9630.201305068082 0.9272699053445249 1.003600810733293 1.1303732572489102 1.1434110303847236 1.1482132266832812 1.1143394438798564 1.097203559098993 0.9952843460242717 1.1094897465626619 1.0185342340016135 1.0 13.233350240445047 -5.511921733989404 4.534667833612132 1.072642697647611 0.9397769234749472 0.4313763424685654 0.05414502926092534 0.1635531516830632 8.411456330159021 0.008702009196435117 0.0462460597137816 3.07665122086571e-06 5.511921733989404 -0.13286577417266388 IAKEEIFGPVQQIMK ddPTM_A549_PD325901_60min_R1 4 IAKEEIFGPVQQIMK 15 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;;; 133.47 5.585e-10 87867100.0 15755.7 15592.5 16620.5 17758.8 21458.2 19442.0 17310.800000000003 19754.7 19677.8 19123.0 19537.0 False True 17355.207065266688 16906.534696883504 17748.46707718567 18855.72074283891 19951.05005877125 19283.670797974544 17969.571966833242 19360.677011237647 18850.81049739279 17915.5705164484 17134.072855246963 1.012906108891209 0.9867201359369859 1.0358580372062887 1.1004809482331999 1.1644079155798408 1.1254574998535336 1.0487624348655915 1.1299518319317075 1.1001943704015542 1.0456107352760624 1.0 14.064580507599945 -5.9941786464150635 4.960431106203175 1.0710544367364803 1.001230872441432 0.3249817613068541 0.04614189389608691 0.2278635133707876 16.181116880296045 0.008216592486249692 0.0252328056957952 1.0134944005047964e-06 5.9941786464150635 -0.06982356429504821 IALEARPLLSQEDS(ph)EEEENELEAINR ddPTM_A549_MK2206_60min_R1 1 IALEARPLLSQEDSEEEENELEAINR 26 1 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 IALEARPLLS(0.013)QEDS(0.987)EEEENELEAINR 77.27600000000001 1.5706e-06 3549600.0 728.08 507.17 433.56 582.59 954.64 594.31 537.35 485.59 1224.4 719.38 686.49 True False 850.962104153034 532.982786701782 495.0453273928606 725.3245761534592 814.2137206039613 657.1994897289497 634.9795394289382 554.4238695570059 947.0753549650243 556.8715583688919 516.0155868398564 1.6491015501381108 1.0328811770315598 0.9593611898907546 1.4056253234431098 1.5778859037772626 1.2736039501320515 1.2305433316804089 1.0744324080448162 1.8353619137069705 1.079175847728249 1.0 9.011270834332047 IALEARPLLSQEDS(ph)EEEENELEAINR ddPTM_A549_PD325901_60min_R1 2 IALEARPLLSQEDSEEEENELEAINR 26 1 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 IALEARPLLSQEDS(1)EEEENELEAINR;IALEARPLLS(0.049)QEDS(0.951)EEEENELEAINR 151.73 2.0396e-33 9493800.0 1679.29 1611.23 1989.3600000000001 1853.33 2194.6 2095.67 2054.37 2819.0 1706.17 2319.66 2532.3999999999996 True False 1849.7702845720403 1747.0140067121774 2124.36993259349 1967.805984882179 2040.4588669589891 2078.6035583371727 2132.5501745443985 2762.7728335372803 1634.4656082659992 2173.1962717243478 2220.930854206247 0.8328806279892679 0.786613416353547 0.9565223197156817 0.886027577650753 0.9187403845079373 0.9359154763420395 0.9602055689872273 1.2439706658605927 0.7359371883057347 0.9785069479351443 1.0 11.116948761812347 -5.755264902686612 24.94318135352688 0.9149312514093049 0.8097469928596297 0.10986304450578321 0.11974387989613766 288.3594836734341 1164856.6802303107 0.018713409877466333 0.06895794306038014 1.7568516761064912e-06 5.755264902686612 -0.10518425854967517 IALEARPLLSQEDS(ph)EEEENELEAINRK ddPTM_A549_PD325901_60min_R1 2 IALEARPLLSQEDSEEEENELEAINRK 27 2 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 IALEARPLLSQEDS(1)EEEENELEAINRK;IALEARPLLSQEDS(1)EEEENELEAINRK 118.33 4.0002e-18 19890400.0 3168.5 2761.5 2680.8 3105.3999999999996 3328.0 3312.3 2756.3999999999996 3248.6 2678.2 3089.3 3859.9 True False 3490.163787473582 2994.2212964850914 2862.7352089599813 3297.213505124893 3094.2527609767235 3285.3257269895635 2861.2963103599545 3183.8041245226013 2565.6445676913777 2894.2410707767644 3385.156769922087 1.031019838869652 0.8845148097983087 0.8456728605292541 0.9740209181510912 0.9140648340041106 0.9705091817845645 0.8452477993879765 0.940518959952298 0.7579101182219188 0.854979921902813 1.0 11.725006932628377 -7.761400484067426 24.999999999827168 0.8850045781717925 0.9308036672162471 0.1274680450207747 0.07267519619292902 2.865667585609924 1839422.1195448004 0.014856557986980802 0.021259244857019174 1.7322059096998875e-08 7.761400484067426 0.04579908904445462 IALLEEAK ddPTM_A549_PD325901_60min_R1 2 IALLEEAK 8 0 A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4;P35241-2 A0A2R8Y5S7 RDX Radixin 0 ; 107.66 0.00027036 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IALS(ph)PITK ddPTM_A549_MK2206_60min_R1 2 IALSPITK 8 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 IALS(0.762)PIT(0.238)K;IALS(0.856)PIT(0.144)K 66.435 0.008481200000000001 2459100.0 2435.6 2528.8 2649.4 2274.3 2925.7 2637.46 2715.6 2416.3999999999996 3577.2 3462.0 3329.8999999999996 True False 2846.669735297121 2657.5051186218943 3025.124758729228 2831.5036020972057 2495.3334056513536 2916.5542665957464 3208.9893687042413 2758.9320999146394 2766.969911614577 2679.931795536576 2502.993929435297 1.1373058886880165 1.0617305489116615 1.2086025152333186 1.1312466917312995 0.9969394557078802 1.1652262645534075 1.2820603881481345 1.1022528131089333 1.1054640920518877 1.070690489505581 1.0 11.28943907669344 -10.052018349965577 0.7582242186461478 1.0060178293313162 1.134452343014126 0.19791136740111237 0.0725433016123299 0.551408557771364 0.632454719523841 0.03565455622793639 0.014901778178170493 8.87118528397145e-11 10.052018349965577 0.12843451368280978 IALS(ph)PITK ddPTM_A549_PD325901_60min_R1 3 IALSPITK 8 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 IALS(0.856)PIT(0.144)K;IALS(0.988)PIT(0.012)K;IALS(0.847)PIT(0.153)K 77.67699999999999 0.0044224 3576650.0 4169.21 3652.7 3920.8599999999997 4337.25 4762.61 4108.05 4553.36 5157.94 5013.81 5222.0 5493.799999999999 True False 4592.465129989818 3960.525848151765 4186.9531376465375 4605.152081890562 4428.100703712543 4074.5954028196365 4726.640606494198 5055.060840374348 4803.097001693938 4892.282028807907 4818.097428067553 0.9531698348889073 0.8220103282013241 0.8690054944210301 0.9558030219695248 0.9190558658936396 0.8456855561042234 0.9810180630552263 1.0491819469914365 0.9968866494300779 1.0153970736059001 1.0 12.234247851664945 -7.8921535977852155 6.235543342515131 1.002833231090077 0.8939630588227732 0.6601176752019713 0.041010548754277815 0.10246856124883874 5.345820598404872 0.00619016511198337 0.008587834927210129 1.281877138461929e-08 7.8921535977852155 -0.10887017226730378 IALTDNALIAR ddPTM_A549_MK2206_60min_R1 2 IALTDNALIAR 11 0 P18124;A8MUD9 P18124 RPL7 60S ribosomal protein L7 0 ; 117.52 4.7851000000000007e-05 6961400.0 4027.7 4188.5 3867.3999999999996 3827.7 5413.6 4735.3 4378.9 3842.2 6517.7 6329.0 5890.1 False True 4707.477292189284 4401.676759470029 4415.855473657966 4765.48667183198 4617.266611352554 5236.386302962257 5174.489448600307 4386.84361624401 5041.451356628179 4899.2745043186 4427.42561150991 1.0632538421314923 0.9941842383589817 0.9973867120834589 1.0763561243001392 1.0428784166015388 1.1827158178218296 1.168735491602223 0.9908339520916175 1.1386868575548725 1.1065740984065393 1.0 12.112252352044171 -6.273590356194621 22.39688148598781 1.0761801222918306 1.0158658644136775 0.18464228128946525 0.06179205969508101 294.7527794067331 543296.5131877675 0.009979912427512661 0.023397495592146003 5.326104016952288e-07 6.273590356194621 -0.06031425787815303 IANPVEGSTDR ddPTM_A549_PD325901_60min_R1 1 IANPVEGSTDR 11 0 F8VRH0;F8VZX2;H3BRU6;Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4;Q15366-4;Q15366-5;Q15366-7;Q15366-8 F8VRH0;F8VZX2;Q15366-6;Q15366-4 PCBP2 Poly(rC)-binding protein 2 0 64.82 0.016631 4040300.0 2615.1 3230.7 2700.9 2766.4 3406.4 2878.1 2321.5 2737.0 3645.6 3391.1 3090.5 False True 2880.583026865131 3502.962427142635 2884.1993158311016 2937.2742450497544 3167.1462154420387 2854.6617078310146 2409.845952873543 2682.4083878650376 3492.3881099154974 3176.985367271253 2710.3880922936346 1.0627935663735413 1.2924209773140989 1.0641277992740816 1.0837098397093827 1.168521299384059 1.053229873591752 0.8891147211446899 0.9896768641700608 1.2885195739478417 1.17215146284928 1.0 11.404283726182344 -4.919225378217755 16.474408528993116 1.112414370196125 0.00029640114109914795 0.0 0.11845770097775436 35206405.775819175 104676865.82310331 0.01885254212908135 1398298995.378777 1.2044107461655297e-05 4.919225378217755 -1.112117969055026 IAPPET(ph)PDSK ddPTM_A549_MK2206_60min_R1 1 IAPPETPDSK 10 0 Q9NZI8;Q9NZI8-2 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 1 IAPPET(0.998)PDS(0.002)K 105.2 0.00034486 12278000.0 7286.1 7953.7 7060.9 5988.8 8824.5 6925.5 6793.8 7010.9 10061.0 10155.0 10652.0 True False 8515.815551957781 8358.509357000536 8062.2417939575835 7456.0562688474465 7526.427739744467 7658.351813225164 8028.1455196283905 8004.716544980769 7782.1995641155745 7860.978447046203 8006.814419755787 1.0635709915976197 1.0439244521987405 1.0069225251512057 0.9312138233715752 0.9400027707865906 0.9564792452700245 1.0026641181816294 0.9997379888348803 0.9719470386267473 0.9817860181260412 1.0 12.96701265277136 -5.822984037449668 3.167787575518221 0.9798431339618074 1.0571419716066608 0.6277603421761848 0.023578370382174755 0.13739191059065683 2.7313549949138434 0.0037033114237089177 0.014806147203422429 1.5031972152843956e-06 5.822984037449668 0.07729883764485335 IAPPET(ph)PDSK ddPTM_A549_PD325901_60min_R1 2 IAPPETPDSK 10 0 Q9NZI8;Q9NZI8-2 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 1 IAPPET(0.945)PDS(0.055)K;IAPPET(0.972)PDS(0.028)K 108.35 0.00025671 8389100.0 5764.2 5199.7 4676.0 6630.5 6204.1 6475.7 5828.5 5835.9 7043.4 6782.6 7254.9 True False 6349.377340620242 5637.896967348737 4993.341479072242 7040.050926041927 5768.345418983079 6422.964046211495 6050.306756977581 5719.498396325013 6747.390392083286 6354.345478474246 6362.593292600258 0.9979228670807253 0.8861004794861951 0.7847965836319499 1.1064750805665289 0.9066028824585891 1.0094883879630414 0.9509183565157515 0.8989256633732713 1.0604780286570494 0.9987037024454157 1.0 12.635399189765547 -7.609066090715439 0.5238131525977451 1.0255100238851542 0.9147684791346609 0.074851251423391 0.08264389269674385 1.1531202307603938 0.6346134195235971 0.02132994080823263 0.050841711290319495 2.4599932151331598e-08 7.609066090715439 -0.11074154475049336 IAQLEEQLDNETK ddPTM_A549_MK2206_60min_R1 1 IAQLEEQLDNETK 13 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 161.1 3.5919e-18 1620500.0 1278.9 1737.2 1434.4 1230.4 2568.5 1545.4 1473.8 1765.6 2209.6 1916.2 2201.9 False True 1494.7470538969824 1825.616059818868 1637.8194889111512 1531.8480552347557 2190.677052471376 1708.9332022465046 1741.5703828237995 2015.8792069232275 1709.1291280061405 1483.3290891413021 1655.1074606515472 0.9031117854477935 1.1030196547480964 0.9895547738431495 0.925527853419095 1.323585993388609 1.0325209950861851 1.0522400655110427 1.2179748172542582 1.0326393715446895 0.8962131610218088 1.0 10.692709174151426 -5.246301616457459 23.03390290456547 1.047846649077271 0.9031114691849046 0.1198689137773844 0.11760764239680087 1457.5657162077664 2217745.915006581 0.014374349312558056 0.41742296355384273 5.671505839049342e-06 5.246301616457459 -0.1447351798923665 IAQLEEQLDNETK ddPTM_A549_PD325901_60min_R1 2 IAQLEEQLDNETK 13 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 185.27 2.4750999999999997e-52 2233200.0 1841.4 1763.9 1822.8 1560.7 2476.6 1929.9 2019.8 2070.5 2110.0 1897.7 2394.2 False True 2028.3375724329653 1912.5500434075884 1946.506169386844 1657.1008943931276 2302.6521598061745 1914.1835342563068 2096.6645942769683 2029.2022532241733 2021.3240377226523 1777.8788981364924 2099.7285780842662 0.9659998885587221 0.9108558426882706 0.9270275166530247 0.789197666636047 1.0966427679462505 0.9116337960227004 0.998540771488621 0.9664116945417587 0.9626596784079835 0.8467184362269239 1.0 11.035987134287053 -6.760820036769606 24.999993839333744 0.9831566783086303 0.9012233169286643 0.16914327105012228 0.07092590975672336 14.3659845719575 579840.2157996629 0.007559785608421814 0.015021422142613414 1.7345226014619148e-07 6.760820036769606 -0.08193336137996599 IAQLEEQLDNETKER ddPTM_A549_PD325901_60min_R1 1 IAQLEEQLDNETKER 15 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 77.74600000000001 0.00054971 1899400.0 2038.3 1473.9 1909.7 1802.0 2156.5 2098.9 2261.0 1866.4 1843.3 2138.1 2312.2 False True 2245.226715482848 1598.1107256524995 2039.3037259589958 1913.3054473610662 2005.0348795211253 2081.8072542880764 2347.043592266675 1829.1731878375247 1765.8325112484204 2003.1000011095718 2027.814058243439 1.10721528256281 0.7880952985585064 1.005666036128337 0.9435310104410836 0.988766633395349 1.0266263052202174 1.1574254467393148 0.9020418713449577 0.8708059321662086 0.9878124638531822 1.0 10.985709654188389 IAQLSES(ph)PVILTPNAK ddPTM_A549_PD325901_60min_R1 1 IAQLSESPVILTPNAK 16 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 IAQLS(0.001)ES(0.85)PVILT(0.149)PNAK 179.81 5.996899999999999e-29 23590000.0 2585.9 2027.4 3067.6 2912.8 3353.6 3464.2 3479.7 3148.9 3414.9 2974.7 3378.3 True False 2848.4186643610333 2198.25611316092 3275.785782977334 3092.717040551229 3118.054705291929 3435.9887037518474 3612.121887664903 3086.0927192357376 3271.3836286346395 2786.876934334521 2962.790516808152 0.9613972530969442 0.7419546203790089 1.1056420507604348 1.0438527540188862 1.0524047135978567 1.1597136835220727 1.2191620930244786 1.0416169154478125 1.1041562371945683 0.9406257102972152 1.0 11.532740909258287 -5.773830564340195 24.999997074168775 1.0709789951212638 0.8516759242237986 0.5021815643578309 0.08537877707676579 109.36342592820527 220649.1383643637 0.01096781205917333 0.03444539157875508 1.683330667645783e-06 5.773830564340195 -0.21930307089746526 IAQLSESPVILT(ph)PNAK ddPTM_A549_MK2206_60min_R1 4 IAQLSESPVILTPNAK 16 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 IAQLSES(0.007)PVILT(0.993)PNAK;IAQLSESPVILT(1)PNAK;IAQLSES(0.003)PVILT(0.997)PNAK;IAQLSES(0.001)PVILT(0.999)PNAK 183.73 5.2019e-34 31998800.0 5648.6 5558.01 5316.0 5413.6 6861.6 5217.2 4888.72 5091.3 8307.7 7738.3 7644.5 True False 6601.945584989049 5840.888968819865 6069.8887360929175 6739.932243025735 5852.267729506556 5769.280641102926 5776.937143383339 5813.007366452322 6426.019214670806 5990.21265551724 5746.159672533154 1.1489318016251067 1.0164856707236174 1.0563383341237802 1.1729455196385943 1.018465908192667 1.0040237253900708 1.0053561809285083 1.0116334556867088 1.118315463001734 1.0424723636119386 1.0 12.48838236725949 -5.2479439946844435 23.543622270007862 1.0508466856050573 1.1489319499448012 0.23954670325371707 0.0523749449839055 1281.6635957793515 2235860.988347965 0.008100133297480891 0.19767318772145448 5.650098320900621e-06 5.2479439946844435 0.09808526433974385 IAQLSESPVILT(ph)PNAK ddPTM_A549_PD325901_60min_R1 2 IAQLSESPVILTPNAK 16 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 IAQLSES(0.002)PVILT(0.998)PNAK;IAQLSESPVILT(1)PNAK 233.48 9.8946e-56 27606800.0 5805.97 6600.2 5727.43 6045.06 7163.799999999999 7009.0 6897.9 6569.07 6222.55 6082.3 7536.799999999999 True False 6395.387800270791 7156.422017403914 6116.127841634461 6418.449626872642 6660.639401768341 6951.921027826542 7160.403359175709 6438.0447455142785 5961.037863000521 5698.262539988189 6609.82137971159 0.9675583397610427 1.0826952206863074 0.9253090954027156 0.9710473639384035 1.0076882595061847 1.0517562621533167 1.083297557957329 0.9740119098037098 0.9018455296382943 0.8620902461114349 1.0 12.690395570300325 -8.51207760525072 24.50943330489085 0.9528218790151209 1.0129950715421119 0.29052346930639095 0.05712877974224137 505.05804145225704 1146054.9361452349 0.009417451139104869 0.011029950463504867 3.075547187824199e-09 8.51207760525072 0.06017319252699094 IAQVS(ph)PGPR ddPTM_A549_MK2206_60min_R1 2 IAQVSPGPR 9 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 IAQVS(1)PGPR;IAQVS(1)PGPR 153.1 1.7606e-05 238880000.0 14222.2 16213.0 14311.099999999999 15093.3 18442.0 14993.1 13872.099999999999 14830.3 19450.0 19394.9 21305.7 True False 16622.55966059399 17038.172448677942 16340.62917439793 18791.159177563983 15729.206229969672 16579.659890385694 16392.481006629147 16932.54044088894 15044.606055267663 15013.578619656942 16014.906682593966 1.0379429608953301 1.0638945818645404 1.020338706822312 1.1733542723659718 0.9821603423431239 1.0352642209526914 1.0235764298549146 1.0572987265228537 0.9394126580593262 0.9374752483556253 1.0 13.967127771233626 -8.750373688471129 24.994258675331025 0.9713893105857612 1.0493359844960488 0.40925770302799414 0.04766542470013155 168.31058653979278 380165.45509704656 0.007947927129148612 0.008970291121009817 1.7767499485108504e-09 8.750373688471129 0.07794667391028764 IAQVS(ph)PGPR ddPTM_A549_PD325901_60min_R1 2 IAQVSPGPR 9 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 IAQVS(1)PGPR;IAQVS(1)PGPR 82.494 0.0015086 399170000.0 14517.0 14861.699999999999 17161.8 15414.7 16578.9 16519.699999999997 15902.199999999999 17066.6 18396.3 17138.0 19509.6 True False 15990.755153149436 16114.147616140684 18326.502950287006 16366.831009676273 15414.455258100055 16385.16904028908 16507.366923017744 16726.19327451131 17623.167485856502 16055.903755210631 17110.042881544057 0.9345829968899754 0.9417946949462291 1.0710962606677683 0.9565628282165524 0.9009010301620596 0.9576345982138438 0.9647764787792322 0.977565830215026 1.0299896737760916 0.9383906204308532 1.0 14.062555755093516 -8.600072698508246 4.651959546322257 1.0140753087944712 0.9624313439195353 0.0 0.04578681598087725 0.22376362113712714 9.087417073689204 0.0070181347388711315 0.007988902447955455 2.5114659907235998e-09 8.600072698508246 -0.05164396487493583 IAS(ph)DEEIQGTK ddPTM_A549_MK2206_60min_R1 2 IASDEEIQGTK 11 0 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;A0A3B3ISX8 Q8WX93-4 PALLD Palladin 1 IAS(0.996)DEEIQGT(0.004)K;IAS(1)DEEIQGTK 203.29 2.9805e-24 1060420000.0 25349.0 25522.0 22443.0 19644.1 24834.0 18435.5 15394.400000000001 16927.9 23633.4 24442.0 24363.0 True False 29627.29147645212 26820.96078672412 25625.754872861817 24456.90538185716 21180.951497400878 20386.33237350552 18191.36321165876 19327.481664519528 18280.472634784717 18920.53522429375 18312.99471540652 1.6178288661617428 1.464586278953051 1.3993208249715243 1.3354945906953075 1.156607743657654 1.1132167452849602 0.9933581860510542 1.0553971081671056 0.9982240981812526 1.0331753772842034 1.0 14.160580113218021 -6.363862720861921 0.6402164695131283 0.9957703134719927 1.6535528232395307 0.9737375039440324 0.03399849579656282 0.10943101587928777 0.062478912073721936 0.005397789939661935 0.04050228336071306 4.3265056892494616e-07 6.363862720861921 0.6577825097675379 IAS(ph)DEEIQGTK ddPTM_A549_PD325901_60min_R1 2 IASDEEIQGTK 11 0 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;A0A3B3ISX8 Q8WX93-4 PALLD Palladin 1 IAS(1)DEEIQGTK;IAS(1)DEEIQGTK 190.03 5.4713000000000005e-19 561980000.0 22561.8 22900.2 22875.6 23387.3 26110.0 21999.6 25767.0 31436.0 41322.0 57419.0 69690.0 True False 24852.25732688068 24830.080222258897 24428.07577815762 24831.880404587955 24276.123674610044 21820.442551544118 26747.57728524342 30808.984318935072 39585.38004112581 53793.554540812154 61118.57180130841 0.40662365946104534 0.4062608056840644 0.3996833541459598 0.4062902596172308 0.39719716870233457 0.3570182009893921 0.43763420016092086 0.5040854753460636 0.6476816927236899 0.8801507128748148 1.0 15.899323210893602 -9.531974524603827 0.5185876256252907 0.9983748948094818 0.37815040298838726 0.959055257649675 0.04213338792316541 0.09511944291809867 0.05716488202905292 0.024051347038744765 0.01233397042346102 2.937821977392379e-10 9.531974524603827 -0.6202244918210946 down IAS(ph)DEEIQGTKDAVIQDLER ddPTM_A549_MK2206_60min_R1 2 IASDEEIQGTKDAVIQDLER 20 1 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;A0A3B3ISX8 Q8WX93-4 PALLD Palladin 1 IAS(1)DEEIQGTKDAVIQDLER;IAS(1)DEEIQGTKDAVIQDLER 254.11 5.0782999999999986e-98 273809000.0 5852.4 6575.1 5693.4 4899.8 7167.2 4344.6 3926.3 4144.700000000001 8150.3 7137.9 6819.0 True False 6840.142042557426 6909.7445054772315 6500.809731014185 6100.251219960379 6112.9143743324275 4804.3426882879285 4639.657887149604 4732.223917611408 6304.2700633546565 5525.44343251315 5125.654105174122 1.3344915404362936 1.3480707756893209 1.2682888071693919 1.1901410229384077 1.1926115670118491 0.937313090135785 0.9051835711009203 0.9232429306601935 1.2299444976185134 1.0779977187566085 1.0 12.32352040909975 -6.512226156170406 1.4996296170456558 1.0702755153163181 1.3333668713974671 0.6098823856873532 0.09893601146166184 0.3048182206929415 1.332145752233659 0.019066939247320214 0.05941582338058365 3.0744953733207655e-07 6.512226156170406 0.263091356081149 IAS(ph)DEEIQGTKDAVIQDLER ddPTM_A549_PD325901_60min_R1 2 IASDEEIQGTKDAVIQDLER 20 1 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;A0A3B3ISX8 Q8WX93-4 PALLD Palladin 1 IAS(1)DEEIQGTKDAVIQDLER;IAS(0.999)DEEIQGT(0.001)KDAVIQDLER 367.34 2.303799999999999e-257 743110000.0 37748.1 40010.0 46520.0 45467.0 48085.0 67699.0 69876.0 95225.0 119038.0 194422.0 169529.0 True False 41580.25932331752 43381.78311510719 49677.12694748523 48275.39332695098 44707.67548424451 67147.68178953191 72535.16941761428 93325.66267243287 114035.24682579577 182146.1617397338 148678.00773287428 0.279666508566779 0.29178345726188404 0.33412558928512665 0.32469760701721306 0.300701335496569 0.45163156820189787 0.4878675099543723 0.627703209745106 0.7669947194253489 1.2251049399786877 1.0 17.181831735941483 -8.536135155798402 0.5222009990203496 0.9735784110029183 0.26931020916204745 0.9228016349985222 0.08477506406913946 0.06743022685138327 0.04187409351410777 0.012991823892529982 0.014912841847204735 2.909811421346644e-09 8.536135155798402 -0.7042682018408708 down IAS(ph)HDFDPTGLVQR ddPTM_A549_MK2206_60min_R1 2 IASHDFDPTGLVQR 14 0 Q9NZN5-2 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 IAS(1)HDFDPTGLVQR;IAS(1)HDFDPTGLVQR 76.34100000000001 0.00024426 14510300.0 1529.65 1326.3400000000001 1294.55 1128.99 1710.45 1045.79 1091.3400000000001 949.34 1752.04 1990.3600000000001 1756.19 True False 1787.8175236480713 1393.8450407438165 1478.1366560024624 1405.5926006822876 1458.845070819414 1156.4548036607805 1289.6223514662263 1083.9118522318165 1355.2057374329645 1540.7362936349452 1320.0795546217541 1.3543255915059902 1.0558795762450837 1.1197330121713738 1.064778706526544 1.1051190556749595 0.8760493256727565 0.9769277517791306 0.8210958562587485 1.0266091408568745 1.1671541220683601 1.0 10.366409160912342 -2.0000000000170246 0.6445288051818344 0.9925114986923469 29.870950057201128 0.5149529319191066 0.09519389439903737 98.64431967598537 0.5985088163960925 0.013105186885651314 4069.1397274295828 0.009999999999607994 2.0000000000170246 28.87843855850878 IAS(ph)HDFDPTGLVQR ddPTM_A549_PD325901_60min_R1 2 IASHDFDPTGLVQR 14 0 Q9NZN5-2 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 IAS(1)HDFDPTGLVQR;IAS(1)HDFDPTGLVQR 100.43 9.700199999999999e-06 17783700.0 1906.98 2395.0 2044.65 2156.03 2316.9 2326.06 2349.8599999999997 2416.2 3041.0 3073.8 3385.4 True False 2100.575205755522 2596.8350552532324 2183.4122444792706 2289.203076400601 2154.1689368710845 2307.1173385627353 2439.2852081927304 2368.0069955277686 2913.197345362364 2879.7197434220093 2969.01726181876 0.7074984819956055 0.8746446471188463 0.7353989727704568 0.7710305715764958 0.7255494821715803 0.7770643061702652 0.8215800020975539 0.797572660145861 0.9811991943683744 0.9699235435424688 1.0 11.535769765816877 -8.745084010554285 3.7956783883216123 0.9924721684124186 0.7758196587795586 0.814954138368878 0.04408133453352521 0.0564278559931728 1.7349756522966924 0.007195881927949909 0.007906679875935475 1.7985229725850315e-09 8.745084010554285 -0.21665250963285998 IAS(ph)HSHVK ddPTM_A549_PD325901_60min_R1 1 IASHSHVK 8 0 Q9Y265-2;Q9Y265 Q9Y265-2 RUVBL1 RuvB-like 1 1 IAS(0.995)HS(0.005)HVK 53.751000000000005 0.007496300000000001 4565700.0 1677.7 1640.9 1652.9 1677.9 1880.9 1545.6 1647.8 1927.7 1683.1 1799.2 2008.9 True False 1848.018868942537 1779.184401739051 1765.075733695148 1781.5400722126165 1748.7920727527394 1533.0131460420462 1710.5079307107594 1889.2505112486042 1612.3651601379136 1685.5982049466072 1761.818035466327 1.0489272057278003 1.0098570714586466 1.0018490548758394 1.0111941394339679 0.9926065220974197 0.8701313729236971 0.9708766151085594 1.0723301006216273 0.9151712195471676 0.956737966699526 1.0 10.782849211822414 -7.005843756271491 24.172427567300215 0.9623808187972859 1.014436846065632 0.2116590128919449 0.04836067251720404 234.9974422416399 972067.547652986 0.007619272175574357 0.014070619838324914 9.866343777925985e-08 7.005843756271491 0.05205602726834602 IAS(ph)LEVENQSLR ddPTM_A549_MK2206_60min_R1 2 IASLEVENQSLR 12 0 P29692;E9PK01;P29692-2;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PMW7;E9PN91;H0YCK7;E9PIZ1 P29692 EEF1D Elongation factor 1-delta 1 IAS(1)LEVENQSLR;IAS(1)LEVENQSLR 77.185 0.0010937000000000002 2851400.0 2080.0 2179.4 1539.8000000000002 1264.1 2580.6000000000004 1611.15 1507.5 1761.25 2137.5 2139.8999999999996 2616.8999999999996 True False 2431.0531488824167 2290.3221510299586 1758.1667937990749 1573.804556747606 2200.9971585001495 1781.640823605187 1781.3932366039344 2010.9125811019112 1653.3596628860996 1656.4951037749051 1967.0515072342218 1.2358868793937203 1.16434274476639 0.8938082136299268 0.8000830435601853 1.118932143060589 0.9057418258001124 0.9056159587344346 1.022297877664302 0.840526878328067 0.8421208583927854 1.0 10.941819019735815 -5.684500256738413 4.842293689607182 0.9303809783535582 1.2159217103782054 0.5931478645864178 0.0881375152145662 0.10214317508349616 4.269519252638675 0.012047666571066094 0.04941494161746295 2.067758159538943e-06 5.684500256738413 0.28554073202464725 IAS(ph)LEVENQSLR ddPTM_A549_PD325901_60min_R1 1 IASLEVENQSLR 12 0 P29692;E9PK01;P29692-2;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PMW7;E9PN91;H0YCK7;E9PIZ1 P29692 EEF1D Elongation factor 1-delta 1 IAS(1)LEVENQSLR 88.28200000000001 0.00027818 2268100.0 2423.1 2192.5 1859.7 1987.0 2317.8 2451.5 1876.3 2449.1 2362.7 2726.1 2475.8 True False 2669.0913282080596 2377.2696695794198 1985.9104252845718 2109.7324771955823 2155.005723975916 2431.535796792233 1947.7036232507558 2400.2507792182164 2263.4039355105742 2553.973580760864 2171.292295389285 1.2292639428951346 1.094863954810472 0.9146214120971325 0.9716483044109611 0.9924991345255758 1.1198565029478402 0.8970250699948058 1.105448024807679 1.0424224966472213 1.1762458634354291 1.0 11.084338236650863 -5.407263407243221 3.610488822065973 1.013970656298717 1.2275153335003475 0.3416931422274908 0.08178585415749673 0.1469399827822239 3.110544653474602 0.008323770035126256 0.06412574339004698 3.9150435080716154e-06 5.407263407243221 0.2135446772016305 IAS(ph)PVSR ddPTM_A549_MK2206_60min_R1 2 IASPVSR 7 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 IAS(0.996)PVS(0.004)R;IAS(0.944)PVS(0.056)R 88.921 0.012722 253900000.0 9164.5 9402.400000000001 8575.3 8301.5 11580.5 9413.9 8687.5 8423.8 12764.8 13054.1 11062.2 True False 10711.243549486977 9880.941999102537 9791.406485819716 10335.367872668498 9877.023790595591 10410.07264955893 10265.906297178552 9617.89944680555 9873.593181196955 10105.169743533803 8315.150438811728 1.288159923059391 1.1883058607072619 1.177538104436142 1.242956209718975 1.1878346475240755 1.2519403859452691 1.2346025935094922 1.156671730425119 1.1874220741829338 1.215272028797819 1.0 13.021526649842015 -10.615208874584656 0.43567164570645694 0.9480208926483982 1.224496958127322 0.0 0.07235429746644748 0.49184731844992086 0.12734976187689176 0.06005336577460015 0.00938509475898848 2.425443293915176e-11 10.615208874584656 0.2764760654789238 IASDGLK ddPTM_A549_MK2206_60min_R1 2 IASDGLK 7 0 D6RAT0;P61247;H0Y9Y4;D6RG13;D6RB09;D6RED7;D6RAS7;H0Y8L7;E9PFI5;D6RGE0;D6RI02 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 102.71 0.029314999999999997 8691100.0 4419.3 5299.799999999999 4331.7 4827.0 6329.5 4328.3 4592.9 4874.700000000001 7564.9 6749.5 6961.0 False True 5165.16979848849 5569.537182723943 4946.0001952847415 6009.615216692263 5398.4389346379485 4786.317833106991 5427.3704785394375 5565.703653142647 5851.462228662952 5224.783262268669 5232.391586173494 0.9871527605344684 1.0644343205201519 0.9452656808703812 1.1485407996933121 1.0317345033776202 0.9147476358143292 1.0372638188780006 1.06370166710189 1.1183150443337118 0.9985459184811531 1.0 12.35325479917743 -8.000460709578569 24.99999364314758 1.0576605096976754 1.017400585280496 0.032522762616538525 0.06523114850849264 39.08528491626667 2121102.129618661 0.010803217520645926 0.014837199417084083 9.989397394660025e-09 8.000460709578569 -0.040259924417179516 IASDGLK ddPTM_A549_PD325901_60min_R1 2 IASDGLK 7 0 D6RAT0;P61247;H0Y9Y4;D6RG13;D6RB09;D6RED7;D6RAS7;H0Y8L7;E9PFI5;D6RGE0;D6RI02 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 102.72 0.029310000000000003 19822000.0 9764.5 10121.0 9509.6 9870.2 11499.3 10428.7 11325.0 11400.599999999999 11255.3 11483.6 12244.5 False True 10755.784851755017 10973.932189652585 10154.978641870272 10479.85983714939 10691.628838431376 10343.77212482447 11755.979072277789 11173.206089402313 10782.278882360086 10758.52353619656 10738.504124280673 1.0016092304174165 1.0219237300323412 0.9456604499419058 0.9759143094663933 0.9956348402620335 0.9632414352233958 1.0947501566532454 1.0404806814888437 1.0040764297869416 1.0018642644901186 1.0 13.390505419168266 IASLEVENQSLR ddPTM_A549_PD325901_60min_R1 2 IASLEVENQSLR 12 0 P29692;E9PK01;P29692-2;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PMW7;E9PN91;H0YCK7;E9PIZ1 P29692 EEF1D Elongation factor 1-delta 0 ; 119.74 4.6161e-05 12381500.0 5457.2 6182.1 6390.799999999999 6062.6 6954.5 7552.8 5837.7 6909.799999999999 7521.3 6905.9 7400.4 False True 6011.21092662169 6703.087263081834 6824.518119002328 6437.073032836409 6466.039911722538 7491.292500922863 6059.856868012016 6771.978618366766 7205.2059170253 6469.860295431733 6490.197715000748 0.926198428859574 1.0328017045750448 1.0515115900443013 0.991814628074958 0.9962778016419478 1.1542471939812082 0.933693723075017 1.043416382017876 1.1101673991182053 0.9968664406752957 1.0 12.664046713288085 -5.262006374322099 3.9979886522354398 1.0435847459980507 0.9156849371311827 0.18438988250749155 0.05863666535775968 0.2651792207787796 8.77201112996273 0.008161783049451346 0.09785721166054574 5.470079341703815e-06 5.262006374322099 -0.12789980886686803 IASPVS(ph)R ddPTM_A549_PD325901_60min_R1 1 IASPVSR 7 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 IAS(0.496)PVS(0.504)R 70.332 0.021345 187320000.0 4885.9 4563.9 4307.1 4483.3 5423.2 4693.4 4746.8 5045.0 4475.9 5221.1 5533.4 True False 5381.912971190523 4948.515870008444 4599.405706696336 4760.223258686945 5042.293141024327 4655.178506491809 4927.442071548629 4944.3735172740635 4287.793488361526 4891.438854961502 4852.826879112637 1.1090263686007757 1.0197181958638724 0.9477786496965167 0.9809175924193231 1.039042452292536 0.959271497305717 1.0153756139039596 1.0188646000448642 0.8835661347856634 1.0079565945397841 1.0 12.244609678640021 -8.723040581373327 24.99706882149817 0.9450172883465106 1.007736322654575 0.11432612329891245 0.051335996405370295 188.57025387375322 122756.42760826934 0.009553463034415595 0.010832508052982274 1.8921668024102015e-09 8.723040581373327 0.06271903430806447 IASPVS(ph)RK ddPTM_A549_MK2206_60min_R1 1 IASPVSRK 8 1 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 IAS(0.143)PVS(0.857)RK 62.201 0.0043806999999999995 19903000.0 6360.9 7519.5 6198.9 6089.2 7538.1 5742.2 5894.2 5160.7 6231.4 6377.6 7541.3 True False 7434.464410926042 7902.210431618683 7077.997232160722 7581.054273354575 6429.255475660689 6349.8357926361305 6965.099844239405 5892.245028980908 4819.997849501025 4936.895730564434 5668.587080708253 1.3115198382022835 1.3940352894131343 1.2486351768766288 1.3373798735764277 1.134190122533567 1.120179632460151 1.2287188579925918 1.0394556783001223 0.8502996921234202 0.8709217412159084 1.0 12.468773466800378 -7.710391829686433 0.7533623881283756 0.9295297594535258 1.3263582986351514 0.7929613317989349 0.07988398574080245 0.2213784389609713 0.2533162668082928 0.018781099022612453 0.03612898575140379 1.9480862019843887e-08 7.710391829686433 0.39682853918162564 IATGS(ph)FLK ddPTM_A549_MK2206_60min_R1 2 IATGSFLK 8 0 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 IAT(0.001)GS(0.999)FLK;IAT(0.008)GS(0.992)FLK 78.556 0.0042587 6368800.0 3192.0 3536.6000000000004 3700.6 3146.7 4520.700000000001 3773.6 3434.8 3504.3 5031.1 5264.299999999999 5192.799999999999 True False 3730.73156309263 3716.597833960059 4225.400725505164 3917.6416412607305 3855.7110185350775 4172.919847287047 4058.858699228653 4001.04525646866 3891.5638830157923 4075.0909737848638 3903.284446010878 0.9557929007468068 0.9521719171039119 1.0825244185889362 1.0036782344326776 0.9878119496199105 1.0690791063284495 1.0398572677368596 1.0250457817794172 0.9969972562447853 1.0440158871715257 1.0 11.930472885511312 IATGS(ph)FLK ddPTM_A549_PD325901_60min_R1 4 IATGSFLK 8 0 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 IAT(0.003)GS(0.997)FLK;IAT(0.005)GS(0.995)FLK;IAT(0.028)GS(0.972)FLK;IAT(0.033)GS(0.967)FLK 90.15 0.0026425 14108600.0 8639.83 9154.029999999999 9178.029999999999 9236.7 11420.2 8953.56 8521.14 9339.5 9798.2 10982.7 10386.1 True False 9516.939181293317 9925.472234171079 9800.906307777892 9807.229980932281 10618.084549551195 8880.645175903352 8845.416645646726 9153.216345803992 9386.41572815834 10289.250447680697 9108.675542912448 1.0448214053138103 1.0896723884181152 1.0759968627276526 1.076691110000442 1.1657111398389015 0.9749655846303001 0.9710980047510238 1.0048899318766713 1.0304918298974877 1.1296099415558682 1.0 13.153025577264007 -7.282477768130238 24.999929978711833 1.0078687796702892 1.0889466244416306 0.34134914397830385 0.04861394023327732 418.61638466352196 497440.87380478944 0.0048868121639218855 0.007817218535505563 5.2182181601685644e-08 7.282477768130238 0.08107784477134139 IATGS(ph)FLKR ddPTM_A549_MK2206_60min_R1 2 IATGSFLKR 9 1 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 IAT(0.06)GS(0.94)FLKR;IAT(0.051)GS(0.949)FLKR 80.979 0.00068163 12606700.0 3764.8 4367.1 4085.3 3858.3 5443.700000000001 4401.0 4073.5 3594.9 6032.1 4914.1 5835.9 True False 4400.206199477173 4589.366736607749 4664.656970195712 4803.583673205669 4642.938941225788 4866.710898852633 4813.602221761941 4104.488083919525 4665.838981284325 3804.0013970093264 4386.68496735381 1.0030823348893274 1.0462038579844049 1.0633672134905061 1.095037302417307 1.0584163156869135 1.10942794731585 1.0973211565419665 0.9356696718514265 1.06363666778171 0.8671699530098745 1.0 12.098915386652704 -11.649942776009487 0.3572864273794829 0.9559911928527477 1.059629725172364 0.26197639112948556 0.060974603074069045 7.462395580227035 0.7284348278950414 0.32527944051106017 0.015231048810323097 2.239016138857071e-12 11.649942776009487 0.1036385323196164 IATGS(ph)FLKR ddPTM_A549_PD325901_60min_R1 2 IATGSFLKR 9 1 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 IAT(0.001)GS(0.999)FLKR;IAT(0.2)GS(0.8)FLKR 77.64 0.00079327 28607000.0 6419.8 6938.0 6860.299999999999 6851.5 8071.5 8397.2 7119.299999999999 8219.6 7515.1 7342.0 8203.2 True False 7071.5333699930225 7522.689608913115 7325.881212335181 7274.701594114515 7504.5856851633425 8328.81598728279 7390.228857330443 8055.653629848546 7199.266481464225 6878.42486700644 7194.258404369244 0.9829412529439188 1.0456518498618852 1.0182955352126355 1.0111815819260002 1.0431354092877216 1.1577032015175464 1.0272398407099448 1.11973370666755 1.0006961213808971 0.9560992225173631 1.0 12.812630263986208 -8.919849117424087 24.99999998534679 1.0003010353155215 1.0512903602828194 0.24863405868452382 0.04862451963993479 35.46494605099662 11059.718468470866 0.00797014053048934 0.008484843888084221 1.2026821978567704e-09 8.919849117424087 0.05098932496729791 IATISLES(ph)KSPPK ddPTM_A549_MK2206_60min_R1 1 IATISLESKSPPK 13 1 Q8TEK3-1;Q8TEK3;H7C2S2 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 IAT(0.006)IS(0.006)LES(0.528)KS(0.459)PPK 53.777 0.0059275 3835100.0 1902.5 1928.4 2279.2 2287.7 2837.6 1889.0 1983.6 2087.9 3395.6 2669.7 2519.7 True False 2223.5954883407676 2026.54732313764 2602.424832073549 2848.186602698757 2420.1927989459905 2088.892726183282 2343.9944438657144 2383.8662189255815 2626.502021658966 2066.6129158128238 1893.9889498177477 1.174027698817745 1.0699889898157262 1.3740443587719833 1.5038031784572072 1.2778283628206373 1.1029065013205537 1.2375966840203947 1.2586484304224548 1.386756782246119 1.0911430692410782 1.0 10.887212198314403 -10.949908268700348 1.1917154999498394 0.9988815127186105 1.2753488409332654 0.3145151374362918 0.12236318359560738 0.41121504364899647 1.0311882894978759 0.0935330442476055 0.02144738803313997 1.1222554710863853e-11 10.949908268700348 0.2764673282146549 IATISLESKS(ph)PPK ddPTM_A549_MK2206_60min_R1 1 IATISLESKSPPK 13 1 Q8TEK3-1;Q8TEK3;H7C2S2 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 IAT(0.001)IS(0.002)LES(0.188)KS(0.809)PPK 62.861000000000004 0.0019010000000000001 3599800.0 2199.2 2410.7 2345.3 2227.7 2964.9 1995.2 2327.1 2223.3 4057.8 3170.6 3574.1 True False 2570.3711947222164 2533.39433306778 2677.8988060118 2773.4866000052516 2528.7671375792816 2206.3307396934274 2749.903947529694 2538.4595835706887 3138.7147789750697 2454.359257922667 2686.552329858165 0.9567545609126168 0.9429908752983527 0.9967789483382883 1.0323590458971912 0.9412685208007046 0.8212498655516266 1.0235810101174816 0.9448762845072536 1.1683058409440237 0.9135721015537573 1.0 11.391540224434863 -8.735946044320283 24.891487189451876 1.0794777674568354 0.9579268226299718 0.03286192205264049 0.08115352030352334 179.18467862156885 174954.35938542848 0.013238895846242561 0.015008745581988094 1.836766524535259e-09 8.735946044320283 -0.12155094482686368 IATISLESKS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 IATISLESKSPPK 13 1 Q8TEK3-1;Q8TEK3;H7C2S2 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 IAT(0.002)IS(0.029)LES(0.151)KS(0.817)PPK 68.257 0.0010992 6614300.0 5173.3 4254.3 5001.4 5453.3 6066.4 5504.3 4431.9 5332.6 5172.0 4925.5 6705.2 True False 5698.489607617827 4612.82479146715 5340.825079861401 5790.13795565711 5640.316991943869 5459.4748057448505 4600.558379728737 5226.2371096562265 4954.638826114485 4614.503089408911 5880.502907764856 0.9690480043965811 0.7844269212716803 0.9082259057825067 0.9846331251722664 0.9591555484984395 0.9284027049006195 0.7823409752342733 0.8887398223637114 0.8425535883286747 0.7847123216818298 1.0 12.521723826035437 -10.951211599280969 1.2262031528090729 0.9997138898233384 0.8888002520573756 0.0 0.09089116401079843 0.504390006437292 1.3537304692735872 0.04650604755557816 0.010958300322554357 1.1188925978018104e-11 10.951211599280969 -0.11091363776596286 IATTTASAATAAAIGAT(ph)PR ddPTM_A549_MK2206_60min_R1 2 IATTTASAATAAAIGATPR 19 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 IATTTASAATAAAIGAT(1)PR;IATTTASAATAAAIGAT(1)PR 331.98 1.2368999999999994e-205 24098000.0 4487.700000000001 5269.6 4978.200000000001 4390.9 7118.8 5597.1 5745.299999999999 5244.9 7933.6 6500.0 7621.8 True False 5245.114046269049 5537.800131718574 5684.183616632389 5466.670697114989 6071.633950217337 6189.381406945715 6789.146641632222 5988.380636832599 6136.652267355862 5031.645485553944 5729.096709021277 0.9155219945946926 0.9666096442391208 0.9921605281478028 0.9541941731419787 1.0597890485347692 1.0803415828536556 1.1850291566804494 1.0452573836645211 1.0711378388311774 0.8782615726543598 1.0 12.484091975800641 -6.760790129967266 24.999014351022446 1.05196847870764 0.9603020722657862 0.26338415905207013 0.0706823655235528 14.18688027080294 546211.2598170447 0.007989410882758502 0.015878529276337195 1.7346420499304017e-07 6.760790129967266 -0.09166640644185375 IATTTASAATAAAIGAT(ph)PR ddPTM_A549_PD325901_60min_R1 2 IATTTASAATAAAIGATPR 19 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 IATTTASAATAAAIGAT(1)PR;IATTTASAATAAAIGAT(1)PR 350.0 4.229999999999999e-230 39169000.0 8919.8 8857.1 10256.7 10571.3 11205.2 11369.400000000001 8436.7 10203.3 12378.8 10380.599999999999 11990.4 True False 9825.3315295903 9603.518900995154 10952.781340547534 11224.265191835762 10418.185407841458 11276.811375912557 8757.763235239385 9999.787177165994 11858.562084436573 9725.167144435722 10515.656813408064 0.9343526233247208 0.9132590642127192 1.0415689228828875 1.0673860312295644 0.9907308304848514 1.07238297863943 0.832830834120864 0.9509427090104056 1.1277053154983365 0.9248273614288721 1.0 13.360251343918026 -8.742699461846017 24.99964577886887 1.0603052966304851 0.9776173499158799 0.0 0.08285967612660103 308.1122234109423 411031.50199421763 0.01369298523198649 0.015512816243390053 1.8084251498367169e-09 8.742699461846017 -0.08268794671460522 IAVAVLEET(ph)TRER ddPTM_A549_MK2206_60min_R1 2 IAVAVLEETTRER 13 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 IAVAVLEET(0.901)T(0.099)RER;IAVAVLEET(0.981)T(0.019)RER 114.74 7.7243e-06 3897900.0 839.78 749.0 758.17 672.39 1105.53 870.38 706.3 708.62 1435.03 964.7 942.01 True False 981.5143333502293 787.1209007623369 865.6899065168493 837.1255801847342 942.9080014867352 962.4830338885156 834.6255675047157 809.0690550577349 1109.9979962720179 746.7735999867524 708.082918846616 1.3861573372635523 1.1116224947841764 1.2225826714291548 1.1822423022833448 1.3316350054349873 1.3592801185718297 1.1787116244298377 1.1426190824877027 1.5676101862195382 1.0546414552735701 1.0 9.467774504326218 -6.738940372788579 24.6965038107499 1.267967936481675 1.2172871366165163 0.0 0.16071128208844593 1161.4269073887883 1274855.590828621 0.02986279294200754 0.0621266154071327 1.8241461344234227e-07 6.738940372788579 -0.05068079986515861 IAVAVLEET(ph)TRER ddPTM_A549_PD325901_60min_R1 1 IAVAVLEETTRER 13 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 IAVAVLEET(0.5)T(0.5)RER 74.76899999999999 0.00044406 1970900.0 364.65 445.02 506.74 512.08 450.23 583.61 407.51 490.57 372.09 514.88 546.0 True False 401.668999558858 482.52339719782566 541.1304236751648 543.7100185819396 418.60739800917946 578.8572736552788 423.0180160480283 480.7851965052801 356.45235127783013 482.3703889300292 478.8454613791701 0.8388280394304489 1.0076808409294773 1.1300732017311006 1.1354603153508998 0.8742014528100714 1.208860311608791 0.8834123953679175 1.004050858330208 0.7443995610842307 1.0073613051290213 1.0 8.903416317396127 -7.8899811818761885 18.993597579941458 0.8878055778529111 1.0344116550084068 0.11068048714876544 0.12628236879240046 2.2569827960750573 378.35856084454065 0.020946995236199556 0.028942558474483897 1.2883053731824647e-08 7.8899811818761885 0.14660607715549567 IAVHS(ph)PK ddPTM_A549_MK2206_60min_R1 1 IAVHSPK 7 0 Q9NXL9;Q9NXL9-4 Q9NXL9 MCM9 DNA helicase MCM9 1 IAVHS(1)PK 78.334 0.0051708 5051700.0 846.96 866.88 895.16 903.46 1421.6 907.02 973.25 1048.1 1498.1 1496.6 1677.5 True False 989.9061418160827 911.0004892561486 1022.1071484200405 1124.8077405578601 1212.4845231821332 1003.0002543688516 1150.0769270479454 1196.6713846716316 1158.782741974113 1158.517020566158 1260.9304533552706 0.7850600635284791 0.7224827402907301 0.8105975596832214 0.8920458202629693 0.9615792210869162 0.7954445478732947 0.9120859314545464 0.9490383720112009 0.918990209880848 0.9187794754924066 1.0 10.300272990648292 -2.0000003567039206 0.15515738125681833 1.0122075080760944 1.7111088871390731e-10 0.5932842390125334 0.05293795532802581 24.662093702400075 0.2361436146693129 0.08004012029240545 5.714680401584837 0.00999999178659207 2.0000003567039206 -1.0122075079049835 IAVHS(ph)PK ddPTM_A549_PD325901_60min_R1 2 IAVHSPK 7 0 Q9NXL9;Q9NXL9-4 Q9NXL9 MCM9 DNA helicase MCM9 1 IAVHS(1)PK;IAVHS(1)PK 60.59 0.0088132 12629600.0 2771.7 3019.3 3329.5 3192.7 3905.8999999999996 3532.7 3015.1000000000004 4211.0 3437.3 3427.4 3513.8999999999996 True False 3053.0809435823035 3273.747007234271 3555.4598919099753 3389.905827852206 3631.563058623493 3503.9308624629525 3129.8412804260292 4127.008301534406 3292.842234532737 3210.9933790762584 3081.712576447374 0.9907091812896849 1.0623141925222228 1.1537285855544457 1.1000071368628803 1.1784236746731234 1.1370076785364311 1.015617518760993 1.3391931269242696 1.068510496306166 1.0419509605201145 1.0 11.5895165962647 -9.242373825007562 2.877461365798906 1.0245141144658596 1.1222521960538856 0.15232705897244703 0.08885423750616435 0.28085613357959105 4.766970168022851 0.016948481961904488 0.015778583659916936 5.723032009817005e-10 9.242373825007562 0.097738081588026 ICNGGLS(ph)PGNPGDSK ddPTM_A549_MK2206_60min_R1 1 ICNGGLSPGNPGDSK 15 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ICNGGLS(1)PGNPGDSK 155.57 1.9876e-19 3607700.0 2122.5 2573.6 3027.9 2303.8 3373.4 2403.7 2732.3 2693.8 4023.7 3198.8 3768.0 True False 2480.7261098571767 2704.585247265622 3457.301750191072 2868.2311034215127 2877.177328715957 2658.0579385530727 3228.7235425359404 3075.65439941651 3112.338374528561 2476.188858336915 2832.3016084904084 0.875869329177616 0.9549072172109319 1.22066863918274 1.0126856175286552 1.0158442589910004 0.9384798322978724 1.1399645902319073 1.0859205072639868 1.0988725089159588 0.8742673629510459 1.0 11.46775918917353 -7.754672121088081 24.994949659572285 1.0578018398028037 1.011794129137792 0.013522840324441732 0.10312682727817023 417.6583994469939 1542622.1534074775 0.01408919220564322 0.020637003447534497 1.759251293073699e-08 7.754672121088081 -0.046007710665011636 ICNGGLS(ph)PGNPGDSK ddPTM_A549_PD325901_60min_R1 1 ICNGGLSPGNPGDSK 15 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ICNGGLS(1)PGNPGDSK 171.81 5.9452e-51 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ICRDPQT(ph)PVLQTK ddPTM_A549_MK2206_60min_R1 2 ICRDPQTPVLQTK 13 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 ICRDPQT(1)PVLQTK;ICRDPQT(1)PVLQTK 139.08 2.4728000000000004e-09 45246000.0 5559.700000000001 6667.8 6012.0 5415.6 8275.9 6136.3 6248.299999999999 5372.5 9167.0 8242.4 9830.8 True False 6498.041438385374 7007.162539523513 6864.592001766482 6742.422243115524 7058.526073018437 6785.639193053721 7383.535230694763 6134.068327591207 7090.689136690931 6380.43611540459 7389.5410437227965 0.8793565662518749 0.948254092921765 0.9289605350521405 0.9124277412117521 0.9552049350905836 0.9182761355413172 0.9991872549333581 0.8301013948358704 0.9595574467665037 0.8634414610667313 1.0 12.851269047611742 -9.237523378338588 2.4765775600663673 0.9859545151400758 0.9251686541818104 0.0 0.055716957357836154 0.2239659741226335 2.8295477813628658 0.007816063235248019 0.00723739471221983 5.787308340745013e-10 9.237523378338588 -0.060785860958265436 ICRDPQT(ph)PVLQTK ddPTM_A549_PD325901_60min_R1 2 ICRDPQTPVLQTK 13 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 ICRDPQT(1)PVLQTK;ICRDPQT(1)PVLQTK 121.03 3.8105e-06 94304000.0 8268.4 8786.5 10387.9 8458.2 7633.3 8178.3 8544.8 9922.5 7507.9 8428.2 9137.9 True False 9107.801881125626 9526.969191224429 11092.885361517223 8980.643804034058 7097.163341455417 8111.698636306724 8869.977039893967 9724.587953449334 7192.369072425548 7896.0420136343855 8013.996229920726 1.136486918613851 1.1887913243151935 1.3841889917668395 1.1206199187496866 0.8855960419544172 1.0121914714685316 1.1068107327998715 1.2134505276084375 0.8974759740430642 0.9852814734494194 1.0 12.968306115734023 -6.534374621572531 7.582514867712168 0.98400478102573 1.2353844106824843 0.45068139584217604 0.10447639821783396 0.0872035607153404 30.075031761255303 0.016062802132097778 0.034308078223064205 2.9216310972910917e-07 6.534374621572531 0.2513796296567543 ICS(ph)DEEEDEEK ddPTM_A549_MK2206_60min_R1 1 ICSDEEEDEEK 11 0 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 ICS(1)DEEEDEEK 54.471000000000004 0.018869 1429800.0 646.22 904.23 619.95 785.72 1205.0 1056.5 1180.7 1060.9 1249.1 1038.4 1277.4 True False 755.2861374378829 950.2514447213996 707.8682321182857 978.2214352723117 1027.746096253848 1168.2981287520586 1395.217906771652 1211.285823869989 966.1808444028198 803.8247187998796 960.186325553515 0.7866037219416616 0.9896531740062136 0.7372196554769967 1.018782927061995 1.0703611048213868 1.2167410612503506 1.4530699611529627 1.2615112209307122 1.0062430787543752 0.8371549327538088 1.0 9.907170579846833 -6.445512743142969 5.4995025641884325 1.0768774652645554 0.8537865066293373 0.3388448767277713 0.16523574871023314 0.2484242478213536 13.098605238696532 0.024624475884814243 0.057713187411890805 3.5849842900000556e-07 6.445512743142969 -0.2230909586352181 ICTEQSNS(ph)PPPIR ddPTM_A549_MK2206_60min_R1 2 ICTEQSNSPPPIR 13 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICTEQS(0.002)NS(0.998)PPPIR;ICTEQS(0.001)NS(0.999)PPPIR 162.48 1.0153000000000001e-18 26800000.0 8566.6 10640.2 8591.900000000001 8762.099999999999 11455.0 9793.900000000001 8919.0 9852.2 14695.5 12262.0 12753.7 True False 10012.432646738513 11181.740732031272 9810.360615432046 10908.814893345616 9769.984674346739 10830.283997335346 10539.466850594015 11248.779521097082 11366.99271389131 9492.00568367114 9586.604305786654 1.0444191005875585 1.1663922255852122 1.0233405179256567 1.1379227248130865 1.019128813781267 1.1297309925265178 1.0993952096502195 1.1733851906568322 1.1857162715091913 0.9901322074951594 1.0 13.226804169901927 -4.9855429619292915 15.829797326408087 1.096734909265444 0.9558228131434648 0.03468429292130837 0.0697844516154255 3913895.7633145615 86262055.58709045 0.010339790942580581 12385421.933988485 1.0338488239816328e-05 4.9855429619292915 -0.14091209612197908 ICTEQSNS(ph)PPPIR ddPTM_A549_PD325901_60min_R1 2 ICTEQSNSPPPIR 13 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICTEQS(0.003)NS(0.997)PPPIR;ICTEQS(0.001)NS(0.999)PPPIR 143.25 2.2883e-12 35686000.0 15471.3 15572.599999999999 16377.8 16320.599999999999 16716.699999999997 15783.4 16270.900000000001 16999.8 16821.1 16825.3 18832.9 True False 17041.934986630902 16884.957654044454 17489.295995712022 17328.686395228106 15542.576661484243 15654.8652233696 16890.09800327812 16660.725652914894 16114.167663950959 15762.947686576344 16516.572691589325 1.0318081907700565 1.0223039591405498 1.0588937742887805 1.049169626096359 0.941029168200188 0.9478277070969736 1.0226151828629073 1.0087277768830925 0.9756362875547854 0.9543715867035328 1.0 14.011626727697347 -6.732390779249678 24.999885288017698 0.9865619794150511 1.0405517709478165 0.5534904647530772 0.02614825747344718 136.2092668296922 117224.1364614999 0.0036442320592129673 0.007585079826567376 1.8518645611984784e-07 6.732390779249678 0.0539897915327654 ICTEQSNS(ph)PPPIRR ddPTM_A549_MK2206_60min_R1 2 ICTEQSNSPPPIRR 14 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICTEQS(0.149)NS(0.851)PPPIRR;ICTEQS(0.029)NS(0.971)PPPIRR 85.493 7.1444e-05 31799000.0 2405.85 2832.4 2621.3 2824.4 3601.1000000000004 2668.3 2658.2 2318.0 3661.1 3849.1 4361.7 True False 2811.8986626147894 2976.557061841448 2993.0397561926943 3516.3781267921363 3071.3829603483227 2950.657734925811 3141.1605317018757 2646.583598577277 2831.8666955753447 2979.5856366839503 3278.5695132039814 0.8576602238538057 0.907882858622878 0.912910262887105 1.072534260027251 0.9368058075263483 0.8999832771708662 0.9580887393271028 0.8072372990472005 0.8637506949815755 0.9088066074805139 1.0 11.67885076829679 -7.015207944430145 24.511957694866176 0.9229111105984499 0.942693476677784 0.017585048755553445 0.06807300392826363 2870.6593801567083 4626893.933537213 0.011639997943644481 0.020614861740369434 9.655884351349122e-08 7.015207944430145 0.019782366079334146 ICTEQSNS(ph)PPPIRR ddPTM_A549_PD325901_60min_R1 2 ICTEQSNSPPPIRR 14 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICTEQSNS(1)PPPIRR;ICTEQSNS(1)PPPIRR 101.78 1.9319e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IDAGTMAEPS(ph)ASPSK ddPTM_A549_PD325901_60min_R1 1 IDAGTMAEPSASPSK 15 0 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 IDAGT(0.002)MAEPS(0.661)AS(0.333)PS(0.004)K 49.298 0.012029 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IDAGTMAEPSAS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 IDAGTMAEPSASPSK 15 0 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 IDAGTMAEPS(0.202)AS(0.781)PS(0.017)K 65.472 0.00083788 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IDASKNEEDEGHS(ph)NS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 2 IDAS(0.002)KNEEDEGHS(0.875)NS(0.581)S(0.542)PR 45.784 0.0093875 6663600.0 1139.0 1975.0 1703.6 1480.2 1964.3 1468.3 1280.0 1275.6 1988.1 2498.7 2245.1 True False 1331.235354123592 2075.5190640929454 1945.196096841215 1842.849066448703 1675.354072092476 1623.6745314213417 1512.5594314116313 1456.4202063611617 1537.798524343323 1934.2419345774817 1687.5797083922 0.7888429491676536 1.2298791303139958 1.1526543529576168 1.0920071255208632 0.9927555206791555 0.9621320541761299 0.8962891790472434 0.863023061440298 0.9112449721313742 1.1461633041441837 1.0 10.720739930343399 -6.937458305725127 2.9480833772079142 0.9446593251411143 1.0838236471767908 0.11561885208106948 0.12337842066682064 0.2709176384378502 4.7895354793173315 0.01535372914880794 0.030463755675790304 1.1548928544121311e-07 6.937458305725127 0.13916432203567652 IDASKNEEDEGHS(ph)NSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 2 IDASKNEEDEGHS(0.729)NS(0.604)S(0.667)PR 61.523999999999994 0.00089182 6071400.0 1382.7 1207.8 1361.4 1060.8 1945.5 1322.8 1042.2 1340.3 2007.9 1882.9 2099.3 True False 1616.0659562306334 1269.2718610690936 1554.466991218378 1320.6960476211223 1659.319527188266 1462.7778179964243 1231.5542495446894 1530.2916294966024 1553.1138559574274 1457.5515822691566 1577.9858722674926 1.024132081682342 0.8043619929532124 0.9850956326907294 0.8369504891215175 1.051542701585725 0.9269904399679323 0.7804596170274978 0.9697752409517103 0.9842381248481489 0.923678473860303 1.0 10.623868573599728 -8.506436656179755 24.753187181493807 0.991738469174918 0.9137062511467097 0.07047827609644186 0.08357066412066284 803.6427722345453 1209867.7628928644 0.012272589952683292 0.01463736010565541 3.115755309879515e-09 8.506436656179755 -0.07803221802820837 IDASKNEEDEGHS(ph)NSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 2 IDASKNEEDEGHS(0.999)NS(0.009)S(0.991)PR;IDASKNEEDEGHS(1)NS(0.04)S(0.96)PR 131.77 4.145e-13 65824000.0 10317.2 11045.7 11528.7 12538.6 13712.7 14101.3 11659.1 13828.6 12966.3 15028.5 15842.7 True False 11364.594548878797 11976.559903887515 12311.106909704919 13313.080844773289 12749.567258246841 13986.463688071104 12102.793430604319 13552.777724673171 12421.371502522863 14079.597945220139 13894.14833514978 0.8179410694881059 0.8619858961480136 0.8860641626057754 0.9581789774831688 0.9176213576180594 1.0066441893878288 0.8710712696212084 0.9754306199817228 0.8940002080659346 1.013347317561106 1.0 13.76218978441448 -2.0000000000561395 0.016099788558304504 1.6574702735155542 8.380156519455899e-07 0.46125185803200786 0.04670828404091287 3135.7022663245502 3.789831319797364 152.47448234979905 248.8016426472968 0.00999999999870734 2.0000000000561395 -1.6574694354999022 IDASKNEEDEGHSNS(ph)SPR ddPTM_A549_MK2206_60min_R1 4 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHS(0.001)NS(0.582)S(0.417)PR;IDASKNEEDEGHS(0.11)NS(0.445)S(0.445)PR;IDASKNEEDEGHS(0.011)NS(0.555)S(0.434)PR;IDASKNEEDEGHSNS(0.653)S(0.347)PR 209.24 1.0085e-55 1725301000.0 9591.0 10968.099999999999 10496.800000000001 9950.77 12403.099999999999 9398.32 8754.59 10043.93 16751.7 18239.0 18640.2 True False 11209.726322563107 11526.329441457134 11985.40407919868 12388.709096707036 10578.62042028722 10392.843984300085 10345.185681751525 11467.687835745592 12957.466696967991 14118.797232464365 14011.323896651505 0.8000476190006615 0.8226438505366186 0.8554083944960412 0.8841926136378697 0.7550050586451256 0.741746037773334 0.7383446245378618 0.8184585496939512 0.9247853231103044 1.0076704625919428 1.0 13.774305658579868 -8.910114339945753 2.000755347732569 0.9720268621735083 0.8001249565160414 0.7511856737726598 0.045518442717833986 0.12664096067264066 1.0011711031955959 0.009970195726337425 0.010234197806751971 1.2299449114162062e-09 8.910114339945753 -0.17190190565746688 IDASKNEEDEGHSNS(ph)SPR ddPTM_A549_PD325901_60min_R1 4 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHSNS(0.979)S(0.021)PR;IDASKNEEDEGHSNS(0.943)S(0.057)PR;IDASKNEEDEGHSNS(0.751)S(0.249)PR;IDASKNEEDEGHS(0.081)NS(0.46)S(0.46)PR 211.92 7.825199999999999e-56 4816284800.0 21023.43 21981.629999999997 21801.37 27096.37 30516.260000000002 30209.789999999997 26779.839999999997 30308.11 29353.26 28869.08 31830.460000000003 True False 23157.713136968836 23834.099104637193 23280.942070487858 28770.051234578805 28372.903172981827 29963.77148626396 27798.961465690725 29703.59096979768 28119.64456091128 27046.281361972 27915.51520991065 0.829564239199401 0.8537939896654868 0.8339785920276546 1.0306115082685192 1.0163847222461004 1.0733734004531692 0.9958247682930622 1.064053116929478 1.007312397763956 0.9688619808231212 1.0 14.768779562353107 -6.259575306871149 24.99810541828878 1.0146786033229314 0.8405804344040503 0.8850189518600243 0.028925584143515856 35.40618801998794 474808.25595082977 0.003693718479970688 0.009248459896679146 5.500785283601774e-07 6.259575306871149 -0.17409816891888108 IDASKNEEDEGHSNSS(ph)PR ddPTM_A549_MK2206_60min_R1 4 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHSNS(0.362)S(0.638)PR;IDASKNEEDEGHSNS(0.18)S(0.82)PR;IDASKNEEDEGHS(0.002)NS(0.236)S(0.763)PR;IDASKNEEDEGHSNS(0.019)S(0.981)PR 223.44 1.6425999999999997e-64 3153201000.0 15288.5 17368.1 18413.399999999998 16552.5 21392.399999999998 13938.599999999999 14808.899999999998 15846.0 29562.399999999998 32063.2 34937.3 True False 17868.825032061945 18252.062104846922 21024.69700022072 20607.86324306995 18245.606298340917 15413.573400306137 17499.485440493532 18092.219026339753 22866.563601452173 24820.100851140494 26261.404189573226 0.6804215381276736 0.6950147057290137 0.8005930242133938 0.7847205387155974 0.6947688770421924 0.5869287601317948 0.6663575684746321 0.6889280898971523 0.8707289007238641 0.9451170497956471 1.0 14.680656438323009 -9.049436467583808 1.5279483516967918 0.9583491956393188 0.6995391457813758 0.7620666046201724 0.05968892477602386 0.1297939292672117 0.6173021564025112 0.01449082013350175 0.013923785907277296 8.924081593531266e-10 9.049436467583808 -0.258810049857943 IDASKNEEDEGHSNSS(ph)PR ddPTM_A549_PD325901_60min_R1 5 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHSNS(0.002)S(0.998)PR;IDASKNEEDEGHSNS(0.031)S(0.969)PR;IDASKNEEDEGHS(0.002)NS(0.165)S(0.833)PR;IDASKNEEDEGHS(0.002)NS(0.168)S(0.83)PR;IDASKNEEDEGHSNS(0.184)S(0.816)PR 264.97 8.014199999999997e-101 2421133000.0 77090.09999999999 78144.6 82346.8 100587.1 110703.2 116254.9 103273.90000000001 118875.1 105868.6 112296.2 130665.40000000001 True False 84916.23020126767 84730.11969049746 87935.3490395353 106800.13671712129 102927.78913730725 115308.15863858914 107204.04477814626 116504.04287478808 101419.31090997369 105205.79876741054 114594.38415621569 0.7410156337636005 0.739391553210783 0.7673617663467814 0.931984036595814 0.8981922621705051 1.0062287038551596 0.9355087124688861 1.016664505269029 0.8850286308246863 0.9180711562967468 1.0 16.806176819155557 -6.25320855637798 2.5039062661724594 0.9509379451030927 0.7379751216830275 0.8264202776176062 0.04091065279646787 0.10048750971461944 1.2290401649290437 0.006895861339142537 0.02058106475361144 5.582020712303051e-07 6.25320855637798 -0.21296282342006523 IDASKNEEDEGHSNSSPR ddPTM_A549_MK2206_60min_R1 2 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 ; 212.69 6.0693999999999996e-55 69539000.0 5278.5 6578.2 6034.1 5023.9 6792.6 5098.9 4242.9 4862.7 8610.9 10541.9 10472.9 False True 6169.381753065308 6913.002282236055 6889.82611408169 6254.755725531438 5793.417538102807 5638.462213624111 5013.780009012824 5552.002616394183 6660.544898781711 8160.477468332481 7872.189892664323 0.7836932082665115 0.8781549195958694 0.8752108635618602 0.7945382175498477 0.7359346785449606 0.7162507879641338 0.6368977473072518 0.7052678723575762 0.8460853954994556 1.0366210139235585 1.0 12.942549306393724 -9.717252861372309 1.00178315434987 0.9742517431501879 0.7709690966512333 0.6137595378640568 0.07327431510588804 0.2692712415746676 0.5590506059782604 0.02570625754656119 0.016363699129303452 1.9175519500577508e-10 9.717252861372309 -0.20328264649895467 IDASKNEEDEGHSNSSPR ddPTM_A549_PD325901_60min_R1 2 IDASKNEEDEGHSNSSPR 18 1 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 ; 245.03 2.4911999999999997e-74 128904000.0 9876.3 10054.1 9312.2 11116.0 12907.599999999999 13314.0 11530.5 14933.0 13620.6 14830.3 14413.5 False True 10878.934705452217 10901.394291867025 9944.181890807648 11802.610073732318 12001.014704802623 13205.57519824263 11969.299487231703 14635.149600288118 13048.173548912395 13893.912327045162 12640.730874704517 0.8606254506392628 0.8624022139164362 0.7866777632855899 0.9336968084140316 0.9493924697675483 1.0446844671512174 0.9468834995279884 1.1577771685318172 1.0322325250214144 1.0991383698270483 1.0 13.62579226069327 -6.7338020858627905 1.6491789943984934 1.0236462698105067 0.8396250649991532 0.6889617794936305 0.05866441478725625 0.1547834973522077 0.8494306608915129 0.007881791936600225 0.019879543038286537 1.8458564104095037e-07 6.7338020858627905 -0.18402120481135342 IDDEIDT(ph)EVEETQEEK ddPTM_A549_MK2206_60min_R1 1 IDDEIDTEVEETQEEK 16 0 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 IDDEIDT(1)EVEETQEEK 182.18 5.960399999999999e-34 2857100.0 1008.7 1549.0 1218.8 1282.5 2104.5 1722.3 1902.6 1991.5 2182.4 1721.8 1379.5 True False 1178.9438996527367 1627.8374836860626 1391.644166958249 1596.7125575736134 1794.930837814292 1904.5526428297883 2248.2777923466956 2273.801223712961 1688.0898845766656 1332.8441841579663 1036.9320777368678 1.1369538323337567 1.56985931734204 1.3420784223355784 1.5398429577552288 1.7310013609876715 1.8367188012801434 2.168201602224152 2.1928159737092843 1.6279657277658603 1.2853726996920904 1.0 10.018105680914019 -10.292398735959758 0.9776655784942571 1.0461490860999965 1.6892162250513059 0.3022431977477401 0.30744356609200263 0.4001421568299255 0.7490119143509661 0.14865193203639068 0.06133701246832689 5.1003650844925807e-11 10.292398735959758 0.6430671389513094 IDDEIDT(ph)EVEETQEEK ddPTM_A549_PD325901_60min_R1 2 IDDEIDTEVEETQEEK 16 0 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 IDDEIDT(1)EVEETQEEK;IDDEIDT(1)EVEETQEEK 175.45 3.203e-28 7384000.0 1624.22 1807.88 2087.9 1968.73 2071.61 2102.78 2272.6000000000004 1742.3899999999999 1715.37 2020.3899999999999 1812.55 True False 1789.109618712433 1960.2363923554126 2229.5974495626483 2090.3339807897646 1926.107260266523 2085.655656854488 2359.0850366144373 1707.636664571487 1643.2789642598602 1892.8222305980846 1589.6178407011255 1.1254966904015864 1.2331494665980975 1.40259966419303 1.314991520142848 1.211679443291215 1.3120484706780702 1.4840579768367008 1.0742435199508755 1.0337572479276318 1.1907404296388786 1.0 10.634464254200886 -8.439402926764805 6.994332608651125 1.0177971409808224 1.2969724798159048 0.49730861236745616 0.10358655706016957 0.1102324290243697 7.972525255590201 0.014650667310203338 0.017695669882531472 3.635775620972455e-09 8.439402926764805 0.2791753388350824 IDDIFER ddPTM_A549_PD325901_60min_R1 1 IDDIFER 7 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 75.109 0.050638 1776400.0 742.15 708.33 706.28 733.82 688.48 766.9 848.83 936.98 1143.5 822.16 801.3 False True 817.4925216580456 768.0234549843512 754.2124080066609 779.1463947738614 640.1235399270593 760.6546206648844 881.1326901475992 918.2911988534097 1095.4426716283658 770.2486772892969 702.7451798592105 1.1632844238388427 1.0928903918461863 1.0732373975980334 1.108718234011875 0.9108899758733359 1.0824046076235994 1.2538438048399383 1.3067200247995756 1.558804959498732 1.0960568629493983 1.0 9.456857842945178 -7.767975740506292 4.910973915940962 1.2745252142165566 1.0661345789829628 0.25076881626463376 0.14310145012931894 0.24532279835221094 15.741494365809299 0.032045213303834454 0.04612083190395383 1.706177692656992e-08 7.767975740506292 -0.2083906352335938 IDDIPGLSDT(ph)SPDLSSR ddPTM_A549_PD325901_60min_R1 2 IDDIPGLSDTSPDLSSR 17 0 Q9UHW9-3;Q9UHW9-4;Q9UHW9;H0YKJ2;H0YKE6;H0YMQ9 Q9UHW9-3 SLC12A6 Solute carrier family 12 member 6 1 IDDIPGLS(0.007)DT(0.494)S(0.494)PDLS(0.002)S(0.003)R;IDDIPGLS(0.005)DT(0.647)S(0.349)PDLSSR 101.75 1.721e-08 8489900.0 1962.15 2254.83 1560.4499999999998 1976.59 2624.3 2306.68 2099.85 2436.8999999999996 2315.0 2073.2 2603.8 True False 2161.346023541515 2444.8524374265744 1666.3515207481355 2098.6794751384073 2439.978221343515 2287.895162857315 2179.7609408320104 2388.294117788931 2217.7086006293566 1942.297798185475 2283.549106848137 0.9464854585609098 1.070637119252091 0.7297200291208596 0.9190428481895467 1.0685026277850838 1.0019032023424173 0.9545496237830506 1.0458693927915428 0.9711674664576596 0.8505609940074057 1.0 11.157062099315738 -6.590221562221321 16.62268818937375 0.9941404923663544 0.9133290174868319 0.11001053858609333 0.09073834509361485 3.6169818558599935 891.38026401847 0.010820981387614767 0.02252587905494343 2.5690847890138533e-07 6.590221562221321 -0.08081147487952245 IDDIPGLSDTS(ph)PDLSSR ddPTM_A549_MK2206_60min_R1 1 IDDIPGLSDTSPDLSSR 17 0 Q9UHW9-3;Q9UHW9-4;Q9UHW9;H0YKJ2;H0YKE6;H0YMQ9 Q9UHW9-3 SLC12A6 Solute carrier family 12 member 6 1 IDDIPGLS(0.006)DT(0.195)S(0.797)PDLS(0.001)S(0.001)R 76.574 0.00020192 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IDDLMQEIT(ph)EQQDIAQEISEAFSQR ddPTM_A549_PD325901_60min_R1 1 IDDLMQEITEQQDIAQEISEAFSQR 25 0 Q96CF2 Q96CF2 CHMP4C Charged multivesicular body protein 4c 1 IDDLMQEIT(0.333)EQQDIAQEIS(0.333)EAFS(0.333)QR 44.05 0.021222 11646000.0 3296.8 1825.3 1314.0 2966.3 1961.2 3296.4 1881.3 1462.8 1864.3 1982.0 2351.0 True False 3631.488709024113 1979.1244368909076 1403.1759417238943 3149.5216140439134 1823.4520777727007 3269.5552113179374 1952.8939009868618 1433.623306455599 1785.9499542778858 1856.8561817497634 2061.841904216904 1.761283783008265 0.9598817604992791 0.6805448753631895 1.5275281812841586 0.8843801622439404 1.5857448646431154 0.9471598656486608 0.695311945849745 0.8661915109132468 0.9005812608387185 1.0 11.009718000129297 -7.965586201459752 24.996322691382563 0.9123773123302928 1.1993055344061412 0.2361703749703754 0.3097751020753842 240.66429990695337 174805.08640870097 0.045415034804825845 0.06274974283215826 1.082464839474551e-08 7.965586201459752 0.28692822207584834 IDDRDS(ph)DEEGASDR ddPTM_A549_MK2206_60min_R1 7 IDDRDSDEEGASDR 14 1 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(1)DEEGASDR;IDDRDS(1)DEEGASDR;IDDRDS(1)DEEGASDR;IDDRDS(1)DEEGASDR;IDDRDS(0.997)DEEGAS(0.003)DR;IDDRDS(0.796)DEEGAS(0.204)DR;IDDRDS(1)DEEGASDR 200.94 5.321299999999999e-32 1636353100.0 6126.21 5408.94 5775.570000000001 5125.2699999999995 7191.85 6154.08 5450.44 6170.259999999999 7501.88 8109.360000000001 8636.710000000001 True False 7160.16447654565 5684.231942549317 6594.632672595217 6380.961380082109 6133.938391986087 6805.300660852313 6440.7143963618855 7044.913250628738 5802.716158040688 6277.4499438048815 6491.976545930251 1.1029251917175023 0.8755780157759042 1.0158127691834191 0.9828996354095371 0.9448491300898777 1.0482632851035918 0.9921037685201588 1.0851723201380197 0.8938288850840578 0.9669551175042593 1.0 12.664442072420547 -8.784386820081215 24.999914504574274 0.9498636572484545 1.000077347043782 0.11124303167229843 0.06413260754673478 393.80339438126225 429024.09856260614 0.011392886824781718 0.012132096482756288 1.6429077561555886e-09 8.784386820081215 0.05021368979532759 IDDRDS(ph)DEEGASDR ddPTM_A549_PD325901_60min_R1 12 IDDRDSDEEGASDR 14 1 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(0.999)DEEGAS(0.001)DR;IDDRDS(1)DEEGASDR;IDDRDS(1)DEEGASDR;IDDRDS(1)DEEGASDR;IDDRDS(0.803)DEEGAS(0.197)DR;IDDRDS(0.951)DEEGAS(0.049)DR;IDDRDS(1)DEEGASDR;IDDRDS(1)DEEGASDR;IDDRDS(0.997)DEEGAS(0.003)DR;IDDRDS(0.969)DEEGAS(0.031)DR;IDDRDS(0.967)DEEGAS(0.033)DR;IDDRDS(0.999)DEEGAS(0.001)DR 229.93 7.726499999999998e-48 2427950420.0 12423.47 12274.899999999998 11778.6 11472.81 14890.76 13287.260000000002 12052.929999999998 13197.030000000002 13852.1 13794.49 14092.99 True False 13684.691528724767 13309.34890176529 12577.966626475698 12181.459417058 13844.884387933216 13179.052959937013 12511.610846766367 12933.804883780243 13269.944408975336 12923.503547217615 12359.64157282423 1.1072077979036212 1.0768393907982923 1.0176643515400567 0.985583549917984 1.120168761072705 1.066297342223456 1.0122956052606153 1.0464546894481517 1.073651232585307 1.0456212238090445 1.0 13.593349285525811 -10.904401071076991 1.0561329466430647 0.998710155362462 1.0557629219733122 0.05200079358595766 0.04034801341661641 0.6906694909576873 1.3160549623473006 0.030323203970179506 0.006578667373058643 1.2462320869679314e-11 10.904401071076991 0.057052766610850236 IDDRDS(ph)DEEGASDRR ddPTM_A549_MK2206_60min_R1 4 IDDRDSDEEGASDRR 15 2 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(0.5)DEEGAS(0.5)DRR;IDDRDS(0.974)DEEGAS(0.026)DRR;IDDRDS(0.5)DEEGAS(0.5)DRR;IDDRDS(1)DEEGASDRR 109.03 7.022800000000001e-07 47792800.0 1782.94 1715.8000000000002 1619.33 1655.17 2551.6800000000003 1464.18 1893.58 2049.48 2535.4700000000003 2715.92 3048.86 True False 2083.8566833021227 1803.1268912256578 1848.975343682722 2060.6867243034035 2176.3312521900575 1619.1185557559756 2237.6189751034676 2340.0000662692646 1961.1900933135992 2102.3917857116408 2291.74391774471 0.9092886282656015 0.7867924846507733 0.8067984076956933 0.8991784415124844 0.9496398071961595 0.7065006448667003 0.9763826393419618 1.0210565186410718 0.8557631933168142 0.9173764003181432 1.0 11.162230129262875 -14.99999999999871 0.1493947747584975 1.442890982412659 0.8299153173800431 0.14218769447735002 0.08551849091009626 67.15299471184454 0.66137046664345 8.8990616422091 0.16277099809312573 1.0000000000029695e-15 14.99999999999871 -0.6129756650326159 IDDRDS(ph)DEEGASDRR ddPTM_A549_PD325901_60min_R1 6 IDDRDSDEEGASDRR 15 2 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(1)DEEGASDRR;IDDRDS(1)DEEGASDRR;IDDRDS(1)DEEGASDRR;IDDRDS(0.611)DEEGAS(0.389)DRR;IDDRDS(0.758)DEEGAS(0.242)DRR;IDDRDS(1)DEEGASDRR 138.07 1.3535e-10 84397200.0 4179.77 3797.66 3735.24 3584.95 4064.79 3286.6000000000004 3678.45 3818.87 4110.85 3480.3399999999997 4491.009999999999 True False 4604.097173415954 4117.7021360889285 3988.735848222801 3806.384219487822 3779.293173164232 3259.835019268759 3818.4354276750737 3742.6996420044416 3938.0852703659557 3260.590738441461 3938.644240857997 1.1689548209647374 1.04546180977034 1.0127179822044279 0.9664199117051091 0.9595416448023618 0.8276540910835436 0.9694796468449923 0.9502507495292668 0.9998580804820495 0.8278459640038908 1.0 11.943483395666078 -5.2257916347603315 1.4309458168052445 0.9776649446466248 1.2573022779187486 0.46761494198936016 0.06584074022711477 0.7906976888428 1.3403868880369918 0.0076686359255533874 0.32263872287761913 5.945773557420204e-06 5.2257916347603315 0.2796373332721238 IDDRDSDEEGAS(ph)DRR ddPTM_A549_PD325901_60min_R1 1 IDDRDSDEEGASDRR 15 2 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(0.1)DEEGAS(0.9)DRR 40.515 0.033988 33169000.0 122.99 320.52 163.24 284.08 229.15 174.71 135.27 326.39 222.54 150.91 262.65 True False 135.47585425954733 347.5313452650378 174.31844804186343 301.6269764075095 213.05529452458413 173.28721968491593 140.4177738725843 319.8798954019983 213.18741770369627 141.3815168455383 230.34571507552943 0.5881414126376319 1.5087380511987545 0.7567687898370722 1.3094533853543022 0.9249370862172286 0.7522919175123173 0.6095957714105594 1.3886947942448635 0.9255106726591071 0.6137796693946743 1.0 7.847656950743627 IDDVIDS(ph)RVEDPEEGHLK ddPTM_A549_MK2206_60min_R1 2 IDDVIDSRVEDPEEGHLK 18 1 C9JMT8;C9JPR8;B7Z3L9;C9K0N9;C9J111;C9J8A7;Q8NCW6-2;Q8NCW6 C9JMT8 GALNT11 Polypeptide N-acetylgalactosaminyltransferase 11 1 IDDVIDS(1)RVEDPEEGHLK;IDDVIDS(1)RVEDPEEGHLK 97.45700000000001 6.9775e-07 5942200.0 480.40000000000003 545.1800000000001 428.64 453.62 592.84 733.59 554.69 760.46 691.0899999999999 897.57 499.52 True False 561.4797753476503 572.9273333479453 489.4275974113747 564.7569203637759 505.63402133039926 811.2180068823689 655.4699929763427 868.2575338110763 534.5592184439553 694.8083136105618 375.4753979493437 1.4953836613907814 1.5258718320214426 1.3034877919682093 1.504111650052685 1.346650204226205 2.1605090807888625 1.745706899989154 2.3124219018158283 1.423686402260832 1.8504762692982086 1.0 8.552574571763929 -9.62760154925258 1.3318054575197567 1.095395531540854 1.6537186868838893 0.0 0.3825484065210811 0.30575230854708435 1.1045443882345836 0.0839361737099759 0.06176323708880391 2.3572109547906176e-10 9.62760154925258 0.5583231553430354 IDDVVNTR ddPTM_A549_MK2206_60min_R1 1 IDDVVNTR 8 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 57.96 0.043227 2426800.0 1703.8 1941.8 1570.9 1575.4 2241.6 2071.2 1593.4 1819.8 2506.8 2681.2 2256.8 False True 1991.3597860893553 2040.6293259016115 1793.6772414462685 1961.373070722394 1911.8636094295641 2290.37300924871 1882.9001546963227 2077.762222903766 1939.0138025370175 2075.515057825727 1696.3742754886284 1.1738917613070727 1.2029357880434863 1.0573593736733673 1.156214815953534 1.127029357291371 1.350157829167142 1.1099556164596796 1.2248253542428198 1.1430341939006936 1.2235006671672677 1.0 10.728238795258955 -10.185324614666783 0.7409883276528925 1.0037869092242375 1.173514595779925 0.0 0.09587981177800894 0.4448624830564467 0.4703444642637336 0.03947777769512309 0.014321844626106922 6.526425507285273e-11 10.185324614666783 0.16972768655568737 IDDVVNTR ddPTM_A549_PD325901_60min_R1 2 IDDVVNTR 8 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 ; 72.485 0.015604 9665400.0 3572.0 3101.3999999999996 3103.8500000000004 3469.2 3820.3 3634.2 3345.4 3687.8 3959.7 3688.4 3846.4 False True 3934.626810432582 3362.7658623642474 3314.495925966292 3683.4846048751447 3551.9753073195243 3604.6042801151693 3472.7110276731214 3614.2439359768655 3793.28757922767 3455.5137945337187 3373.3171843385335 1.166396930801547 0.9968721227807236 0.9825627845951357 1.0919473039702998 1.0529621477074422 1.068563696544886 1.0294647191186315 1.071421315717625 1.124497748637144 1.0243667006994788 1.0 11.719952262300097 IDEDGENTQIEDTEPMS(ph)PVLNSK ddPTM_A549_MK2206_60min_R1 2 IDEDGENTQIEDTEPMSPVLNSK 23 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 IDEDGENTQIEDTEPMS(1)PVLNSK;IDEDGENTQIEDTEPMS(1)PVLNSK 192.75 4.8231e-51 89424000.0 3408.1 3681.7 3876.4 3691.3 4785.0 3685.2999999999997 3334.6 3342.3999999999996 5469.1 5437.6 4413.0 True False 3983.303959954889 3869.082804187849 4426.131808989955 4595.668665708755 4081.1328386511736 4075.2759998958463 3940.4536562384596 3816.1954356707033 4230.357582358066 4209.242383422786 3317.1303073960116 1.2008283036314698 1.1663945777352132 1.334325576273343 1.3854350718336452 1.230320325237664 1.2285546910259877 1.187910419874872 1.1504508662689419 1.275306421615661 1.268940919817857 1.0 11.695719971536732 -11.24416305818272 0.49739104934037087 0.8924445645840602 1.250748214757401 0.0 0.10514598245039708 1.2418316082010799 0.2982423512165297 0.2330380832014433 0.016747837501389907 5.6995024124163735e-12 11.24416305818272 0.35830365017334076 IDEDGENTQIEDTEPMS(ph)PVLNSK ddPTM_A549_PD325901_60min_R1 4 IDEDGENTQIEDTEPMSPVLNSK 23 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 IDEDGENTQIEDTEPMS(1)PVLNSK;IDEDGENTQIEDTEPMS(1)PVLNSK;IDEDGENTQIEDT(0.001)EPMS(0.999)PVLNSK;IDEDGENTQIEDTEPMS(1)PVLNSK 174.55 3.5951e-41 149488000.0 10001.9 10256.900000000001 9547.599999999999 10682.8 12414.8 10579.5 10178.3 11117.599999999999 12255.400000000001 12276.8 11626.4 True False 11017.28552499038 11121.284959593686 10195.557550382833 11342.65229360089 11542.827276734917 10493.34405962205 10565.640776279477 10895.850746411523 11740.348157301512 11501.640752828202 10196.426505821953 1.08050457860896 1.0907041749620474 0.99991477843354 1.112414460803936 1.132046337032312 1.0291197659916014 1.0362101634574339 1.0685950357402383 1.151417915933392 1.1280070273895464 1.0 13.315776005704137 -11.151822795451258 1.548549983409118 1.0001935956780383 1.0865260349113908 0.0 0.0572150688834973 0.4010103785072155 1.730626586971283 0.03491078377560817 0.007516767545825482 7.04980662529127e-12 11.151822795451258 0.08633243923335243 IDEELT(ph)GK ddPTM_A549_PD325901_60min_R1 1 IDEELTGK 8 0 J3KT10;Q9BW27-3;Q9BW27;J3KSH3;J3KRC0 J3KT10 NUP85 Nuclear pore complex protein Nup85 1 IDEELT(1)GK 78.098 0.0046036 3617500.0 4420.0 4913.5 4541.2 4719.9 5028.0 4336.9 4773.4 5416.8 4930.9 5462.6 5345.3 True False 4868.715146167975 5327.57788892975 4849.3931404539935 5011.437503329355 4674.850625658341 4301.58172429461 4955.054349104706 5308.757674602607 4723.671420666648 5117.69050374685 4687.861986648492 1.038579028144295 1.1364621876888086 1.0344573185527983 1.069024113253001 0.997224457326771 0.9175999072809634 1.056996635826141 1.1324475186604233 1.0076387560299653 1.0916896696879201 1.0 12.194714381276185 -2.000000000703992 0.2201614830647747 1.001584398588676 1.4596297308057993 0.0 0.06288317908775848 65.4561913068044 0.7601655694770779 0.03654631238700281 10.807911904324289 0.009999999983789986 2.000000000703992 0.4580453322171232 IDENS(ph)DKEMEVEES(ph)PEKIK ddPTM_A549_PD325901_60min_R1 3 IDENSDKEMEVEESPEKIK 19 2 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 2 IDENS(1)DKEMEVEES(1)PEKIK;IDENS(1)DKEMEVEES(1)PEKIK;IDENS(1)DKEMEVEES(1)PEKIK 117.73 1.6481e-14 77703000.0 14935.8 15422.1 15685.400000000001 15125.100000000002 18562.4 13756.5 15364.599999999999 16912.4 14974.0 16563.0 17256.6 True False 16452.071420845168 16721.77449086466 16749.905567972575 16059.343075405597 17258.641060803588 13644.471624953037 15949.308260831735 16575.068914478867 14344.694853487685 15517.209353340728 15134.147598600348 1.0870827916576355 1.1049036215565349 1.1067624032900047 1.061132975661663 1.1403774773810003 0.9015685578628109 1.053862343876359 1.0952099420526187 0.9478363257679822 1.025311088863426 1.0 13.885519800013636 -7.292912295053168 0.6876180277886296 0.9806687277783342 1.108642385695388 0.24794856315799463 0.060467667396518016 0.5480597189058298 0.5007139129463443 0.011711116371551623 0.0321516317189955 5.0943373984721374e-08 7.292912295053168 0.12797365791705373 IDENS(ph)DKEMEVEESPEK ddPTM_A549_MK2206_60min_R1 4 IDENSDKEMEVEESPEK 17 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 IDENS(1)DKEMEVEESPEK;IDENS(1)DKEMEVEESPEK;IDENS(1)DKEMEVEESPEK;IDENS(1)DKEMEVEESPEK 196.81 1.2686e-48 41553700.0 11210.7 11133.1 9234.099999999999 9673.1 13879.7 13146.4 11416.6 12334.9 15473.900000000001 12788.7 15229.899999999998 True False 13102.79208470005 11699.727236685145 10543.634232121078 12043.00993424196 11838.014516327417 14537.543322125952 13490.848441135962 14083.409849046962 11969.086356740687 9899.723787862114 11447.895506143317 1.1445590220201312 1.0219980808181457 0.9210106981202805 1.0519846139213347 1.034077792723977 1.2698878422086075 1.1784566371955727 1.230218238932155 1.0455272194192968 0.8647636399676777 1.0 13.482794788185712 -4.459693868604694 16.45984008675547 1.0600564700257387 1.060154544690889 0.0 0.11970528036705179 0.0 0.0 0.014771365221921256 0.0 3.469813491975816e-05 4.459693868604694 9.807466515043828e-05 IDENS(ph)DKEMEVEESPEK ddPTM_A549_PD325901_60min_R1 4 IDENSDKEMEVEESPEK 17 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 IDENS(1)DKEMEVEESPEK;IDENS(1)DKEMEVEESPEK;IDENS(1)DKEMEVEESPEK;IDENS(1)DKEMEVEESPEK 180.37 1.1387e-31 61979000.0 22085.9 24893.5 21978.4 24069.300000000003 26957.5 22236.7 22957.6 23827.4 23814.3 27289.2 27051.100000000002 True False 24328.044309219746 26991.36260874585 23469.98639085572 25556.005995653577 25064.09819832631 22055.61168775439 23831.264030880764 23352.14381476631 22813.467787459027 25566.155254795995 23723.9861910514 1.0254619149287902 1.1377245961695464 0.9892935445944793 1.0772222589344285 1.056487640672308 0.9296756249197988 1.0045219146127233 0.9843263112155516 0.9616203450693367 1.0776500647449987 1.0 14.534058816705487 -7.192340049377405 10.472564126438996 0.9802910226390598 1.0591338798201628 0.2842124414210928 0.04852614568022787 0.4102377918652776 60.96011272058303 0.005285750761373782 0.009159589671998931 6.421846945299737e-08 7.192340049377405 0.07884285718110307 IDEPLEGS(ph)EDR ddPTM_A549_MK2206_60min_R1 1 IDEPLEGSEDR 11 0 P61978-3;P61978;P61978-2;S4R359 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IDEPLEGS(1)EDR 62.408 0.007526899999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IDEPLEGSEDR ddPTM_A549_MK2206_60min_R1 2 IDEPLEGSEDR 11 0 P61978-3;P61978;P61978-2;S4R359 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 202.05 1.0532e-23 14862500.0 4047.1 4157.1 3014.9 3056.1 4912.7 4009.9 3912.2 4312.4 4788.5 4767.700000000001 4713.8 False True 4730.151537904822 4368.6786335902725 3442.4581547115395 3804.844637193544 4190.048337814339 4434.224956443803 4622.996099662961 4923.695906171117 3703.912395663198 3690.673258688545 3543.2333657383433 1.3349816536623034 1.2329638447847258 0.9715584042526637 1.0738340505553141 1.18254935684746 1.2514628585633094 1.304739378547711 1.3896053118547869 1.045348136388237 1.0416116799914696 1.0 11.790850772558633 -8.966136796611174 23.89443460253884 1.0200063715193883 1.2086609446940118 0.3623611047200592 0.11131292953784969 89.95314912924891 63472.9501746359 0.020865459336955713 0.022088060462100205 1.0810933685610982e-09 8.966136796611174 0.18865457317462342 IDEPLEGSEDR ddPTM_A549_PD325901_60min_R1 2 IDEPLEGSEDR 11 0 P61978-3;P61978;P61978-2;S4R359 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 201.33 1.1856e-23 18871100.0 4792.4 5007.4 4419.7 4336.0 6044.4 4376.0 4787.6 4178.5 4872.6 4850.1 5316.4 False True 5278.9209200215855 5429.391171471831 4719.647419815139 4603.824872229513 5619.862196047988 4340.3633068581785 4969.7947378752415 4095.156539530161 4667.821566922938 4543.863858276757 4662.516503436302 1.1322042326565471 1.1644765584143966 1.0122532362806076 0.9874120271395216 1.2053281080948703 0.9309057251935313 1.065903945693806 0.8783146475754041 1.0011378111976066 0.9745518015706546 1.0 12.186893116600165 -7.281175904357371 24.997119567416988 0.9914598378233246 1.0927313646776435 0.40748703305546774 0.07349424906337308 724.7095488716875 917872.5707852383 0.010444283241731685 0.016711919812867473 5.2338840315660676e-08 7.281175904357371 0.10127152685431895 IDFDSVSSIMASS(ph)Q ddPTM_A549_PD325901_60min_R1 1 IDFDSVSSIMASSQ 14 0 K7EK53;A0A087WVB9;K7ERF1;Q9UBQ5 K7EK53 EIF3K Eukaryotic translation initiation factor 3 subunit K 1 IDFDSVSSIMAS(0.131)S(0.869)Q 66.595 0.0014700999999999998 1936100.0 549.23 885.44 847.35 752.48 860.76 639.01 616.05 1223.8 915.34 761.84 697.37 True False 604.9874252782441 960.0591362519501 904.8562665294833 798.9589805939264 800.303187060794 633.8061144230903 639.4941198654948 1199.3903489474724 876.8714429805932 713.7372923835721 611.5979109926595 0.9891914514493907 1.569755420998279 1.479495351873992 1.3063468109254475 1.308544670732859 1.0363117712328114 1.0456120081044065 1.961076595243419 1.4337384533530846 1.167004137121944 1.0 9.256439668733616 -10.751789978549661 1.1181531619467149 1.0089974929734602 1.3573641443590925 0.11608907471748509 0.26870582268999343 0.6266870646481283 1.4452921741668048 0.15959315631309348 0.04532402378441102 1.7709651763238774e-11 10.751789978549661 0.3483666513856323 IDFIPVSPAPSPT(ph)R ddPTM_A549_PD325901_60min_R1 1 IDFIPVSPAPSPTR 14 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 IDFIPVS(0.008)PAPS(0.415)PT(0.578)R 66.533 0.0044207000000000005 1232200.0 981.17 1200.8 1280.4 1141.0 1533.4 1414.6 1328.5 1361.0 1645.2 1254.7 1324.4 True False 1080.7776561008225 1301.995630207966 1367.295643670681 1211.4769786009858 1425.69927394282 1403.079966609135 1379.056794483094 1333.853787316154 1576.0579653371137 1175.4780278715584 1161.5071960633197 0.9304958761890475 1.1209535632846717 1.177173631213683 1.0430215006045833 1.227456255781215 1.207982155740898 1.1872993978488573 1.1483818540573543 1.356907620270305 1.012028192210595 1.0 10.181782376985911 -4.462674129512668 1.0986852868730748 1.1728397051017851 3.0033500614237485e-08 0.2625819707642455 0.10066123709718512 9.523458721914986 2.5331155356445043 0.018713612115834586 19.842002147427166 3.446084088107119e-05 4.462674129512668 -1.1728396750682846 IDFSSIAVPGT(ph)SSPR ddPTM_A549_MK2206_60min_R1 2 IDFSSIAVPGTSSPR 15 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 IDFSSIAVPGT(0.333)S(0.333)S(0.333)PR;IDFSSIAVPGT(0.333)S(0.333)S(0.333)PR 74.76899999999999 0.00075183 29019000.0 3899.7 5125.1 4725.5 4988.799999999999 5948.700000000001 4643.7 4452.799999999999 4951.5 6582.1 6058.8 6549.6 True False 4557.874021488825 5385.945698927979 5395.646956810966 6211.056223955739 5073.654110195239 5135.093251761412 5261.816122023214 5653.39028833278 5091.264859453845 4690.112871980653 4923.15356023587 0.9258037486993308 1.094003189831425 1.0959737271637042 1.2616011562430658 1.0305699483304678 1.0430495796916373 1.068789762018132 1.1483270263992993 1.0341470760887501 0.9526643470686191 1.0 12.265367024668679 -8.955845195667752 9.275705864562923 1.0149898932607888 1.0869546434733646 0.1862729783168996 0.07972481673919768 0.44681087132184316 88.10666649582141 0.013330563870707043 0.01406538574737641 1.107018310499326e-09 8.955845195667752 0.07196475021257576 IDFSSIAVPGTSS(ph)PR ddPTM_A549_PD325901_60min_R1 4 IDFSSIAVPGTSSPR 15 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 IDFSSIAVPGT(0.046)S(0.186)S(0.768)PR;IDFSSIAVPGT(0.048)S(0.236)S(0.716)PR;IDFSSIAVPGT(0.013)S(0.051)S(0.936)PR;IDFSSIAVPGTS(0.009)S(0.991)PR 240.87 1.333e-64 51551600.0 17493.800000000003 17189.0 16499.300000000003 17775.3 20313.4 21513.800000000003 19901.0 21542.699999999997 21724.300000000003 20871.6 23359.0 True False 19269.75769774511 18637.577354800746 17619.041716350883 18873.239910364704 18886.656861425647 21338.598745677657 20658.343445245046 21113.013948578788 20811.303219288267 19553.76361403045 20485.99108490115 0.9406309715690326 0.9097718180955987 0.8600531769896501 0.9212754136300929 0.9219303466038182 1.0416190584699077 1.008413181457983 1.0306073970782783 1.015879736207973 0.9544943924359226 1.0 14.322350069716197 -7.165400946898817 5.1264331463028165 1.0117330281407728 0.9067852959581404 0.7576670633560845 0.027528359751033956 0.06400075912076474 2.6784511846012364 0.0032140871998163146 0.005630373627960873 6.832805416006917e-08 7.165400946898817 -0.10494773218263242 IDFT(ph)PVSPAPS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 IDFTPVSPAPSPTR 14 0 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 IDFT(0.692)PVS(0.335)PAPS(0.823)PT(0.15)R 49.595 0.041852999999999994 1131000.0 1671.4 1464.0 1213.4 1797.4 1895.6 1529.0 1210.0 1730.7 1474.9 1649.4 1714.5 True False 1841.0792975803517 1587.3764179084471 1295.7486207669506 1908.4213158084244 1762.4595954649865 1516.5483309383346 1256.0472121374057 1696.1798307921163 1412.9150821029095 1545.2566025116346 1503.6273691109648 1.2244252368649746 1.055698007709849 0.8617484939324265 1.269211611209763 1.1721385442106305 1.0085931940936999 0.8353447389562061 1.128058630506972 0.9396710322839562 1.0276858710182188 1.0 10.554231365411908 -7.448157930017892 6.964708651007206 0.9734980950359899 1.1066018588692461 0.21680166082403762 0.11868922434627918 0.30028446049709634 24.019163191159862 0.017122827857521082 0.027373678213520426 3.563215344978115e-08 7.448157930017892 0.13310376383325617 IDFTPVS(ph)PAPS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 IDFTPVSPAPSPTR 14 0 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 IDFT(0.125)PVS(0.876)PAPS(0.861)PT(0.138)R 48.823 0.033327999999999997 1573500.0 1799.6 1402.9 1465.7 1556.8 1921.6 1671.8 1450.1 2011.1 1279.8 1619.7 1578.0 True False 1982.2940672045004 1521.127306477978 1565.171215970101 1652.9600002506706 1786.6334451601165 1658.1854150835225 1505.2843490251664 1970.9870328225695 1226.0144566243837 1517.4318655802683 1383.9160037661727 1.432380333640126 1.099147132006856 1.1309726975558216 1.1944077500024024 1.2909984712207918 1.1981835679123272 1.087699213629081 1.4242100152456858 0.8859023620566006 1.0964768536896365 1.0 10.434540666489733 -8.781965615330737 24.99163701595773 0.9461205323526208 1.219180241196195 0.41560559302384903 0.12147430105656151 122.68229492944657 149370.69589322226 0.01886385138874803 0.02009304564118288 1.652092595213803e-09 8.781965615330737 0.2730597088435741 IDGATQS(ph)SPAEPK ddPTM_A549_MK2206_60min_R1 2 IDGATQSSPAEPK 13 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGATQS(0.5)S(0.5)PAEPK;IDGATQS(0.5)S(0.5)PAEPK 225.85 3.923799999999999e-46 54938000.0 12532.7 13999.0 13693.2 13029.5 16776.4 15067.3 13839.8 14789.7 18866.1 19384.9 18244.0 True False 14647.91336490321 14711.489305436528 15635.101663105257 16221.728084916485 14308.613783562692 16661.711685135717 16354.312514727117 16886.18526655667 14592.958472970971 15005.837626602248 13713.511291215236 1.068137332142392 1.0727733395939658 1.140123877180965 1.1829011359992092 1.0433953405302312 1.2149850852428346 1.192569296617968 1.2313538748733026 1.0641299783170122 1.0942374500551777 1.0 13.7433103944185 -8.98250507487622 4.8185965334010925 1.027007653632284 1.1433940392454005 0.28143650759402583 0.06260628162006565 0.13520916610717734 7.161161681591093 0.011272533522865407 0.011569804056860472 1.0411059418812511e-09 8.98250507487622 0.11638638561311643 IDGATQSS(ph)PAEPK ddPTM_A549_MK2206_60min_R1 2 IDGATQSSPAEPK 13 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGATQS(0.07)S(0.93)PAEPK;IDGAT(0.001)QS(0.081)S(0.918)PAEPK 233.97 3.0766e-47 182583000.0 10787.2 12000.0 11337.3 10720.6 16226.5 11403.8 11214.900000000001 11133.0 15403.0 14402.7 16980.3 True False 12607.815638280967 12610.748743855871 12945.099617702457 13347.147481266025 13839.603345114569 12610.542546770213 13252.502161983064 12711.136843382583 11914.245093536658 11149.12006689042 12763.622877560947 0.9877928672153189 0.9880226691769595 1.014218278139552 1.0457177879119997 1.0843005530541996 0.9880065141175665 1.0383025485092943 0.9958878419801452 0.9334532372060651 0.8735074808964389 1.0 13.639750267087654 -8.524338472584278 24.883828079414332 0.9683696319405837 1.0211978534671797 0.3824523951210307 0.04206172565642401 41.345547569724545 704802.8565486318 0.006103327236947465 0.006945080464246276 2.9899334879973054e-09 8.524338472584278 0.05282822152659605 IDGATQSS(ph)PAEPK ddPTM_A549_PD325901_60min_R1 1 IDGATQSSPAEPK 13 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGATQS(0.305)S(0.695)PAEPK 193.97 1.2992e-26 215190000.0 17166.0 17992.0 19220.0 17857.0 21537.0 16785.0 19297.0 19151.0 18458.0 19148.0 20758.0 True False 18908.67968305872 19508.248982929486 20524.384779249052 18959.986333810535 20024.315418616494 16648.30852504902 20031.357894723573 18769.018281331144 17682.274449424036 17938.99201218188 18204.897595803694 1.0386589423835733 1.0715934478766977 1.1274100648596899 1.0414772307305311 1.0999411182204168 0.9144961369563828 1.1003279633575576 1.0309873034197943 0.9712921677461056 0.9853937336245656 1.0 14.15203900506455 -7.483037169675957 0.6814957411211255 0.9884242296790651 1.0803412333836686 0.26062661794615405 0.05230362864453929 0.6154111848890477 0.5661737580603381 0.010336040720094612 0.024472557982790497 3.2882348687229946e-08 7.483037169675957 0.09191700370460354 IDGATQSS(ph)PAEPKSEDADR ddPTM_A549_MK2206_60min_R1 1 IDGATQSSPAEPKSEDADR 19 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGAT(0.009)QS(0.209)S(0.78)PAEPKS(0.002)EDADR 79.426 8.263299999999999e-05 97362000.0 4712.3 5494.7 6119.6 5303.4 5192.4 5021.0 3948.1 3259.5 7596.7 9536.7 9164.5 True False 5507.621035326259 5774.356760238742 6987.451299735563 6602.733238078669 4428.604838330689 5552.318887329944 4665.418664965833 3721.544106800099 5876.059579437111 7382.352846474194 6888.701722667287 0.7995150983534997 0.8382358523723287 1.014335005497965 0.9584873179154153 0.6428794592395191 0.806003672514957 0.677256593882453 0.5402388224408601 0.8529995659562273 1.0716609810789959 1.0 12.75001639607388 -9.798671331249954 1.2645532040925362 0.9716993125704567 0.7934693484184044 0.31252607184677084 0.13269317665548555 0.4337482471857765 1.4032320350071321 0.03939065990617132 0.02621101913333668 1.589749396357432e-10 9.798671331249954 -0.17822996415205228 IDGPPT(ph)PASLR ddPTM_A549_PD325901_60min_R1 2 IDGPPTPASLR 11 0 E9PQ01;O94913 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 IDGPPT(0.999)PAS(0.001)LR;IDGPPT(0.999)PAS(0.001)LR 122.55 8.7843e-06 12065200.0 3646.2 3648.2 3875.5 4173.7 4005.0 3746.5 4042.1 4126.4 4180.7 4087.1 4517.6 True False 4016.359539809429 3955.6466173590147 4138.514735274695 4431.499969839559 3723.702616499932 3715.9897461481182 4195.924327421993 4044.095714901824 4004.9997177758755 3829.03980849115 3961.963839425894 1.0137294792653677 0.9984055326290422 1.044561460680667 1.1185109580610666 0.9398628476729138 0.937916118559674 1.0590516464759057 1.020730092147391 1.0108622592467218 0.9664499636235939 1.0 11.951999997570201 -6.77671667256293 24.99999857490479 1.0016519458810709 1.0406135563543586 0.22693883395096126 0.04416237120687889 343.2193085434941 561648.1338726648 0.006258210172770971 0.011861104231299395 1.6721811653430508e-07 6.77671667256293 0.03896161047328772 IDGTRT(ph)PRDER ddPTM_A549_MK2206_60min_R1 2 IDGTRTPRDER 11 2 M0QZ39;M0R1C6;M0QXT0;B4DLJ1;Q15853-4;Q15853-3;Q15853-2;Q15853;M0QYU7 M0QZ39 USF2 Upstream stimulatory factor 2 1 IDGT(0.189)RT(0.811)PRDER;IDGT(0.073)RT(0.927)PRDER 75.669 0.0024293 34408000.0 2555.2 2993.0 2375.6000000000004 2320.3999999999996 2297.98 2192.08 2186.8 2012.45 2642.2 3478.1 3872.0 True False 2986.4552913578627 3145.3309158633865 2712.495801629485 2888.8981041667125 1959.9501861156991 2424.0444506150616 2584.1132536023106 2297.7209503696463 2043.7459187263878 2692.3947943546395 2910.4755382364265 1.0261056147434502 1.0806931288518125 0.9319768422699387 0.9925862857164611 0.6734123549113598 0.8328688624141082 0.8878663364984432 0.7894658175900449 0.7022034344135993 0.9250704082488421 1.0 11.50703917683534 -6.560654940348189 24.85490402705264 0.840124045708238 1.01013203781241 0.4549132885014995 0.09333788354626377 143.3287927941243 94302.95527877421 0.017323314785653174 0.036061411629183686 2.7500783028447563e-07 6.560654940348189 0.17000799210417195 IDHYLGK ddPTM_A549_MK2206_60min_R1 2 IDHYLGK 7 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 70.268 0.022994999999999998 23527000.0 2442.36 3339.2 2720.6 2111.19 3720.7 2547.74 2974.1000000000004 2785.9700000000003 3768.0 3619.1 3690.6 False True 2854.5706580309898 3509.151017123627 3106.4219893556033 2628.431644774921 3173.389958781487 2817.340155747059 3514.4554726260435 3180.889779175295 2914.554016259568 2801.5427964258897 2774.122164621735 1.0289996217308708 1.2649590785422806 1.1197855772076926 0.9474822984709185 1.143925815254857 1.0155789790646141 1.2668711989132089 1.1466293084497325 1.0506220863049056 1.0098844355716734 1.0 11.43781560599815 -8.981611739218083 3.169168608260059 1.0202620140047547 1.1183992638589189 0.1816530924143389 0.09230808007472618 0.2940683052951212 5.918169140019933 0.016727196066142442 0.017037975481326476 1.0432496814676599e-09 8.981611739218083 0.09813724985416417 IDHYLGK ddPTM_A549_PD325901_60min_R1 2 IDHYLGK 7 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 70.268 0.022994999999999998 56116000.0 2139.8 2159.62 2443.8 2208.1 2706.8999999999996 2462.2 1988.31 2406.2 2664.6 2331.62 2557.6 False True 2357.0309207624964 2341.618756587049 2609.6509637632066 2344.4893220410513 2516.776682298042 2442.148659539807 2063.97622509498 2358.2064533726157 2552.6161283961055 2184.4011152832413 2243.0314139622064 1.0508238565410528 1.0439527248754368 1.1634482457619193 1.045232495384282 1.1220425477021196 1.088771492159296 0.9201726789234154 1.051347938639414 1.1380206770653438 0.97386113350263 1.0 11.131234110369432 IDHYRHT(ph)AAQLGEK ddPTM_A549_MK2206_60min_R1 11 IDHYRHTAAQLGEK 14 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 IDHYRHT(1)AAQLGEK;IDHY(0.003)RHT(0.997)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHY(0.001)RHT(0.999)AAQLGEK;IDHYRHT(1)AAQLGEK 127.61 6.9767000000000005e-09 1203161700.0 25543.9 25030.7 21748.8 19819.11 29867.0 24864.999999999996 23090.5 22926.020000000004 35885.799999999996 36036.5 34714.899999999994 True False 29855.08583160459 26304.655715236102 24833.106874254627 24674.792839713653 25473.60386457567 27496.197795948825 27285.744961726796 26175.85354299165 27757.723597847023 27895.82962156378 26094.232247500964 1.144125856949242 1.0080639838620005 0.9516703399707376 0.9456033274202482 0.9762158787796974 1.0537270280708153 1.045661918807362 1.003127943934756 1.0637493885456382 1.069041976670356 1.0 14.671443334716642 -7.2618809584356665 24.809955875876565 1.0313297813417466 0.9990208797293538 0.07598619235163484 0.05369103187626226 85.74474558754838 4817560.627690635 0.00811867214737596 0.013497316081126405 5.471659223430275e-08 7.2618809584356665 -0.03230890161239275 IDHYRHT(ph)AAQLGEK ddPTM_A549_PD325901_60min_R1 9 IDHYRHTAAQLGEK 14 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHY(0.001)RHT(0.999)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHY(0.002)RHT(0.998)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHYRHT(1)AAQLGEK;IDHY(0.005)RHT(0.995)AAQLGEK 156.17 3.3122e-19 1747965800.0 23943.12 26208.370000000003 27642.730000000003 29136.95 30941.81 29777.65 29945.61 29875.77 34527.0 33428.21 32626.81 True False 26373.80791640664 28417.04131818252 29518.731887039077 30936.673226685376 28768.56400904962 29535.15069114839 31085.20657541655 29279.874330261835 33075.95026087677 31317.547115705976 28613.91920838922 0.9217125317343523 0.9931195063223294 1.0316214172571152 1.0811756684353522 1.0054045305550126 1.0321952220543447 1.0863666158078331 1.023273817089599 1.1559391784114406 1.0944864591119727 1.0 14.804429494661234 -3.647115252859425 0.5918267088578885 1.0683497868967593 8.167939331863791e-12 0.48775171706100295 0.04296120405471617 15.802262418733152 0.8427592757833466 0.010004633728609338 17.717746716123155 0.00022536410626131057 3.647115252859425 -1.0683497868885914 IDIIPNPQER ddPTM_A549_MK2206_60min_R1 2 IDIIPNPQER 10 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 127.3 4.4021e-06 14095700.0 3434.0 3499.8 3030.8 3441.1000000000004 5168.2 3512.9 3262.0 3413.2 5465.2 4533.2 4584.4 False True 4013.5752467606835 3677.924871145564 3460.6130137980463 4284.169654476849 4407.964626273144 3884.6327463257016 3854.6631759880784 3897.031552486607 4227.340926131047 3509.146971555865 3445.966956996662 1.164716695443511 1.0673128666187401 1.004250202333382 1.2432416526160555 1.2791662489169404 1.1272983156261487 1.1186013168703208 1.1308963786127164 1.2267502790611182 1.0183344806690393 1.0 11.750693152445027 -10.980087006024272 1.2398445977652004 0.999655906907317 1.1565104421937982 0.3462037636182502 0.07501121416023948 0.43533541921108593 1.1861470187194247 0.05785187999604027 0.01318470191681671 1.0469187886130264e-11 10.980087006024272 0.1568545352864812 IDIIPNPQER ddPTM_A549_PD325901_60min_R1 2 IDIIPNPQER 10 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 114.84 0.00025688 20234400.0 2690.3 3028.0 2709.6 2698.1 3470.2 3293.3999999999996 3342.8 2959.3 3157.5 2788.8999999999996 3003.5 False True 2963.4172755058153 3283.180186766926 2893.4897501484515 2864.755509170308 3226.465123540089 3266.579642323288 3470.0120832503476 2900.274439974061 3024.801255502027 2612.8083780433485 2634.088540755198 1.1250256890211434 1.246419828327271 1.0984785459485287 1.0875699373222196 1.2248886374241068 1.240117631500251 1.3173483083660842 1.101054271752971 1.1483293779619157 0.9919212424401844 1.0 11.363088125002745 -10.14174899003042 0.6626160429548583 1.0010784755070097 1.1832234396807033 0.4982808592847192 0.0700759577779002 0.5023305387084501 0.4216582620806795 0.045860519706794396 0.015790254295013552 7.21524379447534e-11 10.14174899003042 0.18214496417369364 IDIS(ph)PSTFR ddPTM_A549_MK2206_60min_R1 4 IDISPSTFR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.992)PS(0.008)TFR;IDIS(0.999)PS(0.001)TFR;IDIS(0.996)PS(0.004)TFR;IDIS(0.999)PS(0.001)TFR 203.55 1.1878e-16 1195096000.0 23417.6 27270.100000000002 24485.9 21366.4 29905.4 25193.9 24056.800000000003 24943.399999999998 32898.8 32293.0 31518.100000000002 True False 27369.918374648485 28658.031609985323 27958.3688117189 26601.168959174163 25506.355275443824 27859.901775642677 28427.60916373699 28479.203335958784 25447.274328588162 24997.98887153746 23691.28591469253 1.155273650961875 1.2096444115856364 1.1801119159336164 1.1228250359629919 1.076613374524582 1.17595566048886 1.1999183693995754 1.202096139420484 1.074119590646898 1.055155425566603 1.0 14.53206888679797 -9.087440516257757 1.8901251885387074 1.0253803586597692 1.1640240651300071 0.6345246139368808 0.040829570164316695 0.13599160927439233 0.9951592277416093 0.009052154047189247 0.008706101603972434 8.176350187818521e-10 9.087440516257757 0.13864370647023794 IDIS(ph)PSTFR ddPTM_A549_PD325901_60min_R1 3 IDISPSTFR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.943)PS(0.056)T(0.001)FR;IDIS(0.958)PS(0.041)TFR;IDIS(0.495)PS(0.495)T(0.01)FR 213.03 3.2356000000000003e-23 1881203300.0 14409.4 17266.609999999997 16456.54 17535.43 20205.67 15135.380000000001 16358.03 16730.02 21051.64 17352.539999999997 17784.11 True False 15872.231680360377 18721.72782187305 17573.3797656141 18618.553685248982 18786.493444977317 15012.122483399242 16980.54378310749 16396.32662665321 20166.9127798501 16256.897662996997 15596.777212761743 1.0176609862307484 1.2003587386344392 1.1267314731683826 1.1937436453227486 1.204511239001712 0.9625143886209955 1.0887213141195289 1.051263758081846 1.2930179424085726 1.0423241571787742 1.0 13.92896033302799 -5.233900646760194 22.418806956528545 1.131020970010689 1.0176604119515253 0.06153430083257694 0.09628681811437993 4965.669786871415 4042203.06855995 0.015866415636016696 1.576100979469593 5.835785938639492e-06 5.233900646760194 -0.11336055805916367 IDIS(ph)PSTFRK ddPTM_A549_MK2206_60min_R1 2 IDISPSTFRK 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.657)PS(0.324)T(0.019)FRK;IDIS(0.847)PS(0.122)T(0.031)FRK 45.915 0.017112 109554000.0 3249.8 4135.299999999999 4350.1 3697.5 5656.200000000001 3362.7 3166.6 2473.9 5803.0 5663.6 6161.700000000001 True False 3798.286790018309 4345.7691067055985 4967.00959196347 4603.387665987081 4824.180472722833 3718.538682020394 3741.930230865682 2824.5829010010016 4488.629765486799 4384.1888264589725 4631.579835731246 0.8200844905480563 0.9382908771601639 1.0724223198409502 0.9939130554272927 1.0415842204652785 0.8028661523510803 0.8079165994285179 0.6098530093792606 0.9691357862080602 0.9465860423340376 1.0 12.177288666572775 -5.267970353812447 6.079013035915625 0.9465825674680302 0.8171844702348345 0.004244412062502478 0.12924828063034585 0.2873887160200733 52.56951314948715 0.01879686337831011 0.15272136757247376 5.395474523153987e-06 5.267970353812447 -0.12939809723319562 IDIS(ph)PSTFRK ddPTM_A549_PD325901_60min_R1 2 IDISPSTFRK 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.785)PS(0.177)T(0.038)FRK;IDIS(0.994)PS(0.006)TFRK 122.46 1.5131e-05 210340000.0 11369.400000000001 10713.4 11965.3 13249.5 13038.2 17218.8 13801.400000000001 16860.1 15832.4 13566.0 16327.7 True False 12523.61311829009 11616.25581668057 12777.337211193995 14067.891523202255 12122.441811348175 17078.575801674935 14326.619829415873 16523.812079007417 15167.019286654082 12709.440444811962 14319.49640981808 0.8745847451523048 0.8112195767384635 0.8923035311795803 0.9824292084431605 0.8465690038538292 1.1926799178471883 1.0004974629968766 1.153938071989596 1.059186639849632 0.8875619701330982 1.0 13.805693136129744 -7.233638448953532 24.967269941133754 1.0471071219671058 0.8837372373310171 0.49160494378243613 0.08481743296558199 416.34219384173326 373905.9998100803 0.010390924860922324 0.01799507416796309 5.839310257563387e-08 7.233638448953532 -0.1633698846360887 IDIS(ph)PSTLR ddPTM_A549_MK2206_60min_R1 2 IDISPSTLR 9 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.982)PS(0.016)T(0.002)LR;IDIS(0.541)PS(0.399)T(0.059)LR 153.66 1.6553e-05 552980000.0 5483.2 5260.6 4589.4 4260.8 6097.7 5621.7 5241.5 5902.4 7383.0 7400.5 6628.2 True False 6408.630108630803 5528.342070160682 5240.245930290601 5304.696191274581 5200.736407574348 6216.5845626175515 6193.8127029250545 6739.083275341895 5710.76228822834 5728.7219101295295 4982.235010986233 1.2862962294029192 1.1096108589759894 1.0517861800447859 1.0647221938702802 1.0438560999443627 1.2477501661221275 1.2431795548116849 1.3526225199095727 1.1462249925255725 1.1498297245106328 1.0 12.282577359470027 -10.223654529530872 1.0407294155737605 1.0140068624107221 1.1657457585399944 0.05593194405178881 0.10563118151684506 0.49492841765351675 1.0631188428768537 0.04271119947148339 0.01954931986777796 5.975104022656565e-11 10.223654529530872 0.15173889612927227 IDIS(ph)PSTLR ddPTM_A549_PD325901_60min_R1 4 IDISPSTLR 9 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.982)PS(0.018)TLR;IDIS(0.996)PS(0.004)TLR;IDIS(0.843)PS(0.156)T(0.001)LR;IDIS(0.831)PS(0.084)T(0.084)LR 180.09 1.3858999999999999e-08 1519468300.0 16992.519999999997 16286.62 16335.039999999999 15803.499999999998 21428.1 16220.71 16075.050000000001 16829.670000000002 18470.6 19728.3 17684.79 True False 18717.58812116792 17659.150625297854 17443.63404497524 16779.646302647412 19923.06417893188 16088.613915719256 16686.794824354896 16493.98902922929 17694.34491524172 18482.651771147262 15509.672943120397 1.2068331930539162 1.1385894912201162 1.124693867430176 1.0818826653653155 1.2845573373466346 1.0373277357119035 1.0758959834647341 1.0634646578118532 1.1408586744629179 1.1916854622873003 1.0 13.92088064372402 -7.366512747249546 20.458262722235997 1.0667675137363404 1.1588970962236402 0.2372496956034612 0.06883320665077962 7.244165350069329 1403.036613173594 0.009990092712930918 0.01597026377617796 4.3001861169950857e-08 7.366512747249546 0.09212958248729985 IDIS(ph)PSTLRK ddPTM_A549_MK2206_60min_R1 5 IDISPSTLRK 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.765)PS(0.117)T(0.117)LRK;IDIS(0.746)PS(0.242)T(0.011)LRK;IDIS(0.972)PS(0.014)T(0.014)LRK;IDIS(0.748)PS(0.251)T(0.001)LRK;IDIS(0.662)PS(0.121)T(0.217)LRK 129.34 5.6573e-07 260473500.0 13900.4 15632.599999999999 15979.2 14882.4 21209.4 14304.2 14563.8 12330.699999999999 23649.100000000002 22145.5 22930.1 True False 16246.447687848622 16428.232567766783 18245.290837429646 18528.588668096327 18089.525355922287 15817.8609496405 17209.853943119324 14078.614486184997 18292.61660985248 17142.81616928229 17235.92333143469 0.942592246173347 0.9531391067286283 1.058561847055451 1.0749983225037958 1.0495245893169418 0.9177263466235115 0.9984874968509624 0.8168181196599182 1.0613076107440444 0.9945980751734611 1.0 14.073130965751078 IDIS(ph)PSTLRK ddPTM_A549_PD325901_60min_R1 5 IDISPSTLRK 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.936)PS(0.064)TLRK;IDIS(0.782)PS(0.078)T(0.14)LRK;IDIS(0.739)PS(0.26)TLRK;IDIS(0.757)PS(0.122)T(0.122)LRK;IDIS(0.856)PS(0.064)T(0.08)LRK 125.28 6.3604999999999995e-06 968737000.0 18828.5 19546.300000000003 20077.0 21150.8 22177.8 25134.1 23289.3 25607.8 24136.699999999997 23253.1 25156.799999999996 True False 20739.955459190904 21193.53529874583 21439.545952808683 22457.236879047974 20620.107837256463 24929.416222784293 24175.587055893964 25097.032340069516 23122.318436635233 21784.89529760113 22062.67308209432 0.9400472636302212 0.9606059619287988 0.9717564989986932 1.0178837711770237 0.9346151194159416 1.1299363467891193 1.0957687205869198 1.1375336182829918 1.0480288744069233 0.9874096042913936 1.0 14.429319975947983 -7.234069735288846 24.986758715827673 1.0455737197933448 0.9680540040649779 0.4756899061395834 0.050465111322284636 712.004935666902 650016.0375201325 0.008259265319013276 0.014303496553761483 5.833514271763368e-08 7.234069735288846 -0.07751971572836691 IDISNVK ddPTM_A549_MK2206_60min_R1 1 IDISNVK 7 0 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 73.248 0.053051 3888800.0 3468.4 2807.3 2975.4 3823.9 4936.3 3703.6 3856.2 3562.2 5121.3 4239.4 4578.2 False True 4053.7811257614276 2950.179579052217 3397.356460754492 4760.7556716613935 4210.17680907707 4095.512493749289 4556.8216245387 4067.152758779971 3961.3337270355937 3281.716595608829 3441.3065881079565 1.1779773240111722 0.8572847270414918 0.9872286510288442 1.3834151505457337 1.2234239238160531 1.1901039296824227 1.3241545058163673 1.1818629507858256 1.151113283752364 0.9536251745047596 1.0 11.748740713046015 -4.887463261018234 20.230009220677623 1.1134532146223297 13.37863450489781 0.004363833731865774 0.1541289635945589 3457.090416522634 622113.7919493035 0.021257022643479166 2065.8898936728424 1.295796310292315e-05 4.887463261018234 12.26518129027548 IDISPS(ph)TLR ddPTM_A549_MK2206_60min_R1 1 IDISPSTLR 9 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.128)PS(0.872)TLR 164.97 3.1186e-06 540870000.0 5217.7 4924.8 3965.7 3748.1 4884.3 5084.9 4534.4 5256.9 6671.8 6376.2 6377.2 True False 6098.320199482587 5175.451284478449 4528.095891783989 4666.3846682586 4165.8259401930845 5622.980742916556 5358.2417857757055 6002.081673581057 5160.64795267531 4935.811991536776 4793.565238233819 1.272188839914381 1.079666391770092 0.9446196446159889 0.9734684804202062 0.8690454250974116 1.173026852345152 1.1177988656622393 1.2521122328132772 1.0765782243899829 1.0296745212036307 1.0 12.226883351536692 IDISPS(ph)TLR ddPTM_A549_PD325901_60min_R1 1 IDISPSTLR 9 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.025)PS(0.902)T(0.073)LR 146.71 2.9583e-05 276770000.0 4587.9 4715.6 5012.8 4245.3 5457.6 4774.2 4858.0 4009.6 5635.6 5540.9 5575.6 True False 5053.660230566529 5113.000161399639 5352.998752415174 4507.522539224164 5074.277003697882 4735.320498080964 5042.873848399599 3929.625382529651 5398.7553303269115 5191.046628384088 4889.8365466404775 1.0335028957232948 1.0456382565410054 1.0947193635936374 0.9218145629675537 1.0377191456806716 0.9684005698174774 1.031297017865406 0.8036312349191852 1.104076849774474 1.0615992127488503 1.0 12.255570525444414 IDISPS(ph)TLRK ddPTM_A549_MK2206_60min_R1 2 IDISPSTLRK 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.257)PS(0.371)T(0.371)LRK;IDIS(0.407)PS(0.506)T(0.087)LRK 56.205 0.006547399999999999 190530000.0 3708.3999999999996 5093.6 4562.1 3714.85 6759.3 4030.3 4398.72 3622.8 6830.099999999999 6358.5 6367.5 True False 4334.287258324787 5352.842483475354 5209.07437978358 4624.988416765955 5765.015923990571 4456.783670903383 5197.91048604607 4136.34299435969 5283.093255428466 4922.110433829962 4786.274015940195 0.9055660507296256 1.1183735961727768 1.0883360130312834 0.9663024727299159 1.2044893177429408 0.931159322692458 1.0860035319196022 0.8642093997510432 1.1038008350198225 1.028380409779586 1.0 12.224687278722302 IDISPST(ph)LR ddPTM_A549_PD325901_60min_R1 1 IDISPSTLR 9 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.327)PS(0.262)T(0.411)LR 57.348 0.014488999999999998 4571900.0 810.04 957.35 916.26 1022.1 1130.3 1055.6 691.32 1061.9 1116.8 964.3 1125.9 True False 892.2746644800694 1038.0292443201172 978.4429135189769 1085.2327956424792 1050.9116273233135 1047.0035435830641 717.62856090482 1040.7195714555653 1069.864779776615 903.4139334315327 987.4214376681455 0.9036411712786276 1.0512524892830817 0.9909071002444793 1.0990573571152364 1.0642989783623737 1.060341110332408 0.7267702862513726 1.0539770879527253 1.083493571198094 0.9149223411282202 1.0 9.947522157197044 IDKTDYMVGS(ph)YGPR ddPTM_A549_PD325901_60min_R1 1 IDKTDYMVGSYGPR 14 1 J3KTF8;J3QQX2;P52565 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 1 IDKT(0.004)DY(0.001)MVGS(0.984)Y(0.011)GPR 47.68 0.0086924 3086600.0 1585.6 1353.1 1477.0 1365.3 1693.2 1382.7 1585.7 1492.2 1623.6 2071.1 2006.3 True False 1746.5689447429738 1467.1304857048626 1577.2381019225202 1449.6314801787264 1574.2754732228934 1371.4397496327238 1646.044681228335 1462.4369003917461 1555.365738221089 1940.3303925438634 1759.5378189835694 0.992629385909939 0.8338158292911138 0.8963934079198377 0.8238706008695702 0.8947096540001076 0.7794318114884067 0.935498324315191 0.8311483189582993 0.8839626641952918 1.1027500356114723 1.0 10.780980807941868 -10.372495507620377 0.7030978696724614 1.0024647976855854 0.8699710637932754 0.48844147512593195 0.06476666324728936 0.5042437228059482 0.44630308104514926 0.036339400316910866 0.010387168367593772 4.2413537118070176e-11 10.372495507620377 -0.13249373389231 IDLNLDIS(ph)PQRPR ddPTM_A549_PD325901_60min_R1 2 IDLNLDISPQRPR 13 1 O14733;O14733-4;O14733-3;O14733-2 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 1 IDLNLDIS(1)PQRPR;IDLNLDIS(1)PQRPR 60.918 0.0021896 5710800.0 580.3199999999999 597.9300000000001 485.23 837.03 929.11 587.74 558.25 552.88 781.34 600.37 624.7 True False 639.2336591909952 648.3196595355173 518.1606257250264 888.7314420669442 863.8525188554934 582.9536403045762 579.4945092361212 541.8523746740304 748.5029969830414 562.4625357402149 547.8658602995741 1.1667703821542394 1.1833547342793267 0.9457800955907257 1.6221697799913724 1.576759169449137 1.064044472465972 1.0577306439924044 0.9890237993251568 1.36621580430976 1.02664279068723 1.0 9.097678896154425 IDLPEVQIEHDPELEKES(ph)PGLK ddPTM_A549_MK2206_60min_R1 2 IDLPEVQIEHDPELEKESPGLK 22 1 Q14966-3;Q14966;Q14966-5 Q14966-3 ZNF638 Zinc finger protein 638 1 IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK 107.23 1.8394999999999997e-10 47722000.0 1224.1100000000001 1547.71 1428.74 1410.99 2534.0 1667.27 1847.85 1718.71 2108.9 1969.0900000000001 1901.7800000000002 True False 1430.7098413838728 1626.4818281960977 1631.3568158023704 1756.682613341749 2161.251956769502 1843.699404755744 2183.580426042174 1962.3424058286241 1631.2375172212842 1524.2712014076028 1429.5155395421668 1.0008354591528879 1.1377853428001303 1.1411955803746265 1.228865699427349 1.511877203840463 1.2897372247847185 1.5274968096824697 1.3727324758268151 1.1411121265206554 1.0662851569251102 1.0 10.481310587526215 -9.158300044989497 2.0422647112589485 1.0484051409163997 1.2803708444223512 0.2706336678443054 0.1517433689781524 0.27982560687939056 2.4114424750449044 0.03317634274669128 0.031245686179649422 6.945443056340636e-10 9.158300044989497 0.23196570350595147 IDLPEVQIEHDPELEKES(ph)PGLK ddPTM_A549_PD325901_60min_R1 4 IDLPEVQIEHDPELEKESPGLK 22 1 Q14966-3;Q14966;Q14966-5 Q14966-3 ZNF638 Zinc finger protein 638 1 IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK 193.6 6.843399999999999e-51 89539000.0 7735.0 7165.099999999999 7465.999999999999 7132.900000000001 8527.3 7533.400000000001 8094.700000000001 8370.199999999999 8588.3 8600.8 8419.8 True False 8520.251505793954 7768.928122920636 7972.687656705165 7573.483033008746 7928.371865587983 7472.050488090808 8402.748238089805 8203.249794705123 8227.363617617746 8057.74402017829 7384.217977509772 1.1538461529364676 1.0520989692588412 1.0796928911074544 1.0256310222795997 1.073691471423995 1.0118946259236319 1.1379333957478215 1.1109165276119812 1.1141821168708665 1.091211560211235 1.0 12.850229425732282 -10.904739294183186 1.176890757402781 1.000347724531796 1.0840871873720417 0.0 0.049320444885992326 0.4300899749568208 1.0651236563014073 0.028836871132562135 0.006987175375743683 1.2452619148463867e-11 10.904739294183186 0.0837394628402457 IDLS(ph)PESSDR ddPTM_A549_MK2206_60min_R1 1 IDLSPESSDR 10 0 O15062 O15062 ZBTB5 Zinc finger and BTB domain-containing protein 5 1 IDLS(0.76)PES(0.193)S(0.047)DR 84.289 0.00091565 4310900.0 1082.0 1218.3 664.86 1013.4 1262.8 982.37 1276.7 1087.3 1530.1 1544.8 1613.7 True False 1264.615147639796 1280.3062662199675 759.1471454248943 1261.6830454932551 1077.0437928210442 1086.3237413555705 1508.6598641275243 1241.4281047165969 1183.534793067612 1195.828607089804 1212.9737541456918 1.0425742051858953 1.0555102794633002 0.6258562007877643 1.0401569211049169 0.8879366013814666 0.8955871779110983 1.2437695860864582 1.0234583398640358 0.9757299273974697 0.9858651953537418 1.0 10.24433261898407 IDLS(ph)PESSDR ddPTM_A549_PD325901_60min_R1 1 IDLSPESSDR 10 0 O15062 O15062 ZBTB5 Zinc finger and BTB domain-containing protein 5 1 IDLS(0.802)PES(0.194)S(0.004)DR 103.91 0.00035965 5666100.0 2546.8 2465.4 2840.2 2768.0 2777.0 2400.9 2492.2 2759.9 2705.5 2881.6 3255.3 True False 2805.3492611449315 2673.1679103220526 3032.9530515100487 2938.973073415892 2581.953100129916 2381.3478664158574 2587.0420347841673 2704.851629400334 2591.7972436296864 2699.6552842230667 2854.9187370469103 0.9826371674756484 0.9363376531995939 1.0623605541386774 1.0294419365701197 0.9043875983666889 0.8341210681460908 0.9061701130800552 0.9474355939805825 0.9078357327643611 0.9456154562968591 1.0 11.479233965687 -6.7576327176060245 24.99981719291569 0.9385598669216276 1.0022164391836825 0.3545934659304285 0.04959255635748997 124.27739704072874 816164.8264321466 0.008608762622891581 0.017406290160141162 1.74729921739672e-07 6.7576327176060245 0.0636565722620549 IDRDSYS(ph)PR ddPTM_A549_MK2206_60min_R1 4 IDRDSYSPR 9 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 IDRDS(0.198)Y(0.06)S(0.742)PR;IDRDSYS(1)PR;IDRDSYS(1)PR;IDRDS(0.002)YS(0.998)PR 180.19 1.0056000000000001e-08 447412000.0 12697.599999999999 13746.6 12515.3 12459.3 18166.1 13618.5 12509.400000000001 12662.9 19253.5 18229.6 19911.2 True False 14840.64445348528 14446.243223524089 14290.157731155698 15511.829059319236 15493.890754487158 15059.600630771323 14782.196055703647 14457.904853504833 14892.61299152165 14111.520698992937 14966.69951883603 0.9915776310473724 0.9652257136146194 0.9547968617376941 1.0364228292147606 1.0352242814113854 1.0062071876179763 0.9876724014603099 0.9660048853996925 0.9950499088178298 0.9428612287721267 1.0 13.869468490539246 -6.2308468864247395 24.999532038533573 1.0000107526020472 0.9700026342384036 0.14252243876495574 0.026837992821860248 708.412317431655 578898.9183691214 0.003004790864881344 0.007949642620466178 5.876965125502606e-07 6.2308468864247395 -0.030008118363643588 IDRDSYS(ph)PR ddPTM_A549_PD325901_60min_R1 4 IDRDSYSPR 9 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 IDRDS(0.009)YS(0.991)PR;IDRDSYS(1)PR;IDRDS(0.006)YS(0.994)PR;IDRDSYS(1)PR 171.67 1.3289999999999998e-07 538230000.0 13802.5 13044.599999999999 13319.3 14785.5 15742.599999999999 14596.4 14990.599999999999 15577.599999999999 15828.0 15520.6 16861.9 True False 15203.719639136541 14143.91422202768 14223.227793457421 15698.766754693144 14636.894085021677 14477.531757820998 15561.075486171063 15266.892547609203 15162.804203352684 14540.62666723784 14787.993196390898 1.028112431296432 0.9564458161557439 0.9618091924013522 1.06158871905111 0.9897823112735744 0.9790058438324363 1.0522777012075473 1.0323843367290149 1.025345630200402 0.9832724747795104 1.0 13.852138664437218 IDRT(ph)DAISEEK ddPTM_A549_MK2206_60min_R1 2 IDRTDAISEEK 11 1 H0Y5E8;Q9NR31-2;Q9NR31 H0Y5E8 SAR1A GTP-binding protein SAR1a 1 IDRT(1)DAISEEK;IDRT(1)DAISEEK 123.02 2.9457e-06 56648000.0 7112.5 5603.9 5931.5 5097.6 7077.1 6743.700000000001 5859.1 6351.7 8091.4 7406.3 8052.5 True False 8312.916116070284 5889.114573807827 6772.675891297052 6346.512228839959 6036.06796497768 7457.31385789423 6923.622628581167 7252.072926265439 6258.710819310682 5733.211686101257 6052.8420123060005 1.3733905658150898 0.9729503201693849 1.118924940966171 1.048517740251092 0.9972287320081679 1.2320351072657778 1.1438631000949284 1.1981269148478166 1.0340119247431423 0.9471933472648213 1.0 12.563396979830923 -8.911251017922497 7.300910638662405 1.0148751281051194 1.125545427517901 0.24623284241770305 0.1082612018224446 0.2705144169789671 19.00995015621102 0.017420857386619512 0.018473302631297747 1.226729988389425e-09 8.911251017922497 0.11067029941278173 IDRT(ph)DAISEEK ddPTM_A549_PD325901_60min_R1 2 IDRTDAISEEK 11 1 H0Y5E8;Q9NR31-2;Q9NR31 H0Y5E8 SAR1A GTP-binding protein SAR1a 1 IDRT(1)DAISEEK;IDRT(1)DAISEEK 158.17 1.1489e-13 68865000.0 11958.4 12788.599999999999 12977.900000000001 11939.2 14913.3 10856.0 12073.2 13048.3 13744.400000000001 13630.7 15366.900000000001 True False 13172.407964691198 13866.3402035956 13858.658336452449 12676.657268109471 13865.841256092 10767.592335295332 12532.652232708537 12788.041420306663 13166.7706654385 12770.055275770186 13476.868718805079 0.9774086428779225 1.0288992564160746 1.0283292525595829 0.9406233400805467 1.0288622339063203 0.7989684072733207 0.9299379918438309 0.9488881792298492 0.9769903484379958 0.9475535854965602 1.0 13.718197712225157 -6.250923243684216 24.26109056074657 0.968470063042377 1.0132810717269254 0.12279749473210588 0.05899389476724103 924.0099738176292 2131713.535397144 0.008516888201990033 0.022266381094325556 5.611471432638225e-07 6.250923243684216 0.04481100868454835 IDS(ph)FVKR ddPTM_A549_MK2206_60min_R1 2 IDSFVKR 7 1 Q96CC6 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 IDS(1)FVKR;IDS(1)FVKR 67.563 0.009798399999999999 12365700.0 2523.5 2063.1 1796.43 1554.37 2391.23 1919.29 1702.6 1769.4099999999999 2210.52 2715.8999999999996 2776.9 True False 2949.40510634845 2168.10297778742 2051.1907867154628 1935.19071977832 2039.4832346432263 2122.3879938784075 2011.9403811886282 2020.2292860908633 1709.8407494750797 2102.376303725531 2087.3190914588677 1.4130111291642782 1.0387022217442043 0.9826915276676006 0.927117817154529 0.9770826334069469 1.016800930228176 0.9638873085678741 0.9678583855997245 0.8191563793344309 1.0072136609722377 1.0 11.027435448876268 IDS(ph)FVKR ddPTM_A549_PD325901_60min_R1 2 IDSFVKR 7 1 Q96CC6 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 IDS(1)FVKR;IDS(1)FVKR 67.563 0.009798399999999999 10757700.0 2883.6000000000004 2663.8 2748.5 3148.5 3717.2 3299.2 3327.1 3558.7 5017.9 5810.1 5574.5 True False 3176.3409492058795 2888.2877746069144 2935.0297380731536 3342.9756942376916 3456.1166956438306 3272.332409046273 3453.7146111589796 3487.7189367538563 4807.015113217295 5443.249294442132 4888.871839667001 0.6497083690011869 0.5907881959948548 0.6003490855004842 0.6837928675310486 0.7069354257973838 0.6693430542595618 0.7064440886211132 0.7133995431124694 0.9832565202905214 1.1133957839264799 1.0 12.255285870678962 -8.713475429059754 3.30659624534133 0.9942146240134755 0.6588792168803947 0.9120452106865953 0.050599215672733205 0.039123535072622936 0.8639283930487288 0.007095118216030933 0.007857771678221501 1.9343032919833498e-09 8.713475429059754 -0.33533540713308074 IDS(ph)LSAQLSQLQK ddPTM_A549_MK2206_60min_R1 2 IDSLSAQLSQLQK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IDS(1)LSAQLSQLQK;IDS(0.997)LS(0.003)AQLSQLQK 163.27 8.5432999999999985e-19 4058900.0 4833.7 5672.200000000001 5355.9 5515.6 9382.0 7161.799999999999 6095.1 8003.4 9722.6 8283.4 9006.7 True False 5649.51038738122 5960.890752074939 6115.4471560647235 6866.922247604691 8001.920228260248 7919.656922381917 7202.500773747688 9137.906459384545 7520.446623801822 6412.174186928846 6770.087817725727 0.8344811085890844 0.880474657428798 0.9033039630672152 1.0143032753024899 1.1819522055990597 1.169801210206807 1.0638711000010663 1.3497471089605804 1.1108344273041 0.947133088900298 1.0 12.72495883240264 -6.32448377852701 2.678571115505163 1.0937939296756707 0.8653831051323265 0.5197822977628738 0.10145202137010917 0.1926062250016125 2.6916353022807944 0.015069657193006047 0.041600550197489414 4.737140016883552e-07 6.32448377852701 -0.22841082454334416 IDS(ph)LSAQLSQLQK ddPTM_A549_PD325901_60min_R1 2 IDSLSAQLSQLQK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IDS(1)LSAQLSQLQK;IDS(1)LSAQLSQLQK 154.47 2.6524000000000002e-18 6165200.0 3345.6 3377.2 3564.1000000000004 3862.2 4231.7 3475.2 3678.6 4058.7999999999997 3304.6 3978.2999999999997 4168.5 True False 3685.242849099454 3661.8084962844296 3805.9812586743756 4100.759322307387 3934.479990572475 3446.8991233988895 3818.5911360071577 3977.8440499329977 3165.719154056054 3727.1094590590747 3655.800926298666 1.0080534808635209 1.0016432979002075 1.0410800082945875 1.1217129720625192 1.076229277767583 0.9428574457112794 1.04452928728625 1.0880909902171247 0.8659440756970326 1.0195055841929022 1.0 11.835971796397994 -8.753686291512006 24.999794482116393 0.936695812225519 1.0400214181550198 0.23361691966554265 0.05887044696069486 143.62723452313512 463125.0337528783 0.011075034005920213 0.012444326718571446 1.7632492528377556e-09 8.753686291512006 0.1033256059295008 IDS(ph)LSLNGEFGYQK ddPTM_A549_MK2206_60min_R1 1 IDSLSLNGEFGYQK 14 0 Q8TEQ0;Q8TEQ0-2 Q8TEQ0 SNX29 Sorting nexin-29 1 IDS(0.573)LS(0.426)LNGEFGY(0.001)QK 47.261 0.031994 921740.0 920.49 871.57 804.12 985.42 1404.3 1273.0 1003.4 909.19 1546.5 1275.9 1275.9 True False 1075.8462081801802 915.9291902235387 918.1563074618201 1226.8479442371843 1197.7293302649612 1407.708015050989 1185.7047917800248 1038.0704667775985 1196.2202192530312 987.673303848965 959.0588169514089 1.1217729185786616 0.9550292161799131 0.9573514066430181 1.2792207553411639 1.2488590992492221 1.467801546859989 1.2363212462287378 1.0823845716546838 1.24728556592128 1.0298360083779992 1.0 9.905475485020302 -6.247276114472198 24.80533670546294 1.1683976496456943 1.0057489786692386 0.2643563819668968 0.13231063819189912 971.7753607700762 1701949.4783012115 0.02132108207648181 0.05611174344833532 5.658794014997286e-07 6.247276114472198 -0.16264867097645563 IDS(ph)PGFK ddPTM_A549_MK2206_60min_R1 1 IDSPGFK 7 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 IDS(1)PGFK 47.823 0.058542 1367000.0 740.03 938.29 744.63 965.08 1031.9 998.73 1041.0 937.87 1313.3 1449.9 1288.9 True False 864.9289720035842 986.0449532393776 850.2297309173953 1201.5246433240882 880.108876949664 1104.4149456966804 1230.1362250777408 1070.8159446064153 1015.8396469091535 1122.3665830007174 968.8305581696617 0.8927556678617045 1.0177682205877545 0.8775835193758442 1.240180373329716 0.9084239442368407 1.1399464399462875 1.2697124535395996 1.1052664839860407 1.0485214760652293 1.1584756214968277 1.0 9.920100559993337 -6.16898938652583 24.793390494571412 1.058729245340191 0.9382090488446184 0.27100981622201326 0.11052222714582065 70.51059349477926 18905.955297299348 0.014973549501360933 0.03961628790792488 6.77658068305826e-07 6.16898938652583 -0.12052019649557266 IDS(ph)PGFK ddPTM_A549_PD325901_60min_R1 2 IDSPGFK 7 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 IDS(1)PGFK;IDS(1)PGFK 71.223 0.020675 6379300.0 2655.5 3047.3 2524.1000000000004 2567.5 2915.8 2838.3 2977.4 3077.2 2616.5 3338.3999999999996 3310.4 True False 2925.084405124223 3304.106665500281 2695.4006046463332 2726.088643784427 2711.004266963921 2815.1858258353677 3090.706586295796 3015.8228319833015 2506.53760412385 3127.6128542650927 2903.241786354587 1.0075235272764045 1.138074920604196 0.9284106536751021 0.9389809200863701 0.9337852188907607 0.9696697805421899 1.0645708534584701 1.0387777022767626 0.8633582004450092 1.0772829424559343 1.0 11.503449011448922 -8.741188061899637 24.99852164431404 0.9354746881006097 1.0010957646536434 0.0 0.0788480743234568 370.0310686495489 456771.48997654545 0.013143750038754566 0.0148945325024527 1.8147296628930174e-09 8.741188061899637 0.06562107655303362 IDS(ph)PGFKPASQQK ddPTM_A549_MK2206_60min_R1 7 IDSPGFKPASQQK 13 1 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 IDS(1)PGFKPASQQK;IDS(0.999)PGFKPAS(0.001)QQK;IDS(0.995)PGFKPAS(0.005)QQK;IDS(1)PGFKPASQQK;IDS(1)PGFKPASQQK;IDS(1)PGFKPASQQK;IDS(1)PGFKPASQQK 131.53 3.1734e-08 789000100.0 36794.41999999999 42681.59 39099.11 37048.229999999996 55806.0 42707.399999999994 42330.5 39725.27 59564.8 58828.6 60572.99999999999 True False 43004.41855879911 44853.90062318926 44643.95172691081 46125.04801315824 47597.01132576121 47226.66872112222 50021.403915132854 45356.44867603704 46073.46790543997 45539.178401762845 45531.05237024666 0.9445074585383701 0.9851276939186255 0.9805165794077814 1.013045945832338 1.045374724456503 1.037240877656138 1.0986217385965917 0.9961651733241352 1.011913090230872 1.000178472297326 1.0 15.474563184652006 -5.743794182655057 1.3902397906820168 1.0170022871712376 0.9479996295941999 0.40544303017234395 0.029430224915383052 0.5621185472122698 1.647369405638077 0.0046134255280102475 0.04223353983500593 1.8038724150178008e-06 5.743794182655057 -0.06900265757703772 IDS(ph)PGFKPASQQK ddPTM_A549_PD325901_60min_R1 6 IDSPGFKPASQQK 13 1 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 IDS(1)PGFKPASQQK;IDS(1)PGFKPASQQK;IDS(1)PGFKPASQQK;IDS(1)PGFKPASQQK;IDS(0.999)PGFKPAS(0.001)QQK;IDS(1)PGFKPASQQK 153.09 1.6103e-13 1477095000.0 75415.8 69342.7 73967.6 73918.7 84655.09999999999 78269.40000000001 82124.09999999999 84144.29999999999 81819.4 80775.0 86827.9 True False 83071.95649782228 75186.45268722688 78987.48613931217 78484.49021745202 78709.21782024055 77631.99995653679 85249.37756553202 82465.97592657348 78380.81515262787 75674.85271485218 76148.61874740744 1.0909187568244703 0.9873646288533195 1.0372806157038978 1.0306751653341593 1.033626336432009 1.0194800803157031 1.1195131174777142 1.0829608899423553 1.0293136821381468 0.9937784028082403 1.0 16.21653024759047 -9.509392544325408 1.5366317020767817 1.0076898451403176 1.0471645566366106 0.2276184937524246 0.035469418978503336 0.42973168296227676 2.0673992741819363 0.008488233125335528 0.006778504159085733 3.094620909894834e-10 9.509392544325408 0.039474711496293 IDS(ph)PGFKPASQQVYR ddPTM_A549_MK2206_60min_R1 2 IDSPGFKPASQQVYR 15 1 A0A087X0K9;G5E9E7;Q07157-2 A0A087X0K9 TJP1 Tight junction protein ZO-1 1 IDS(1)PGFKPASQQVYR;IDS(0.988)PGFKPAS(0.012)QQVYR 81.357 9.5667e-05 90479000.0 5604.799999999999 6062.4 6214.6 10412.0 7608.0 6297.8 6229.9 5736.1 9820.9 8657.2 8984.8 True False 6550.753215796238 6370.950265395984 7095.923728239855 12962.940467412443 6488.873278256659 6964.229015858697 7361.792188868219 6549.209741069508 7596.481830754667 6701.532507313474 6753.626192134981 0.9699608816705015 0.9433377098684191 1.0506835182118166 1.9194044945082387 0.960798405723633 1.0311836660383982 1.0900502899377944 0.9697323415229098 1.124800457508478 0.992286560828289 1.0 12.721446614188482 IDS(ph)PGFKPASQQVYR ddPTM_A549_PD325901_60min_R1 2 IDSPGFKPASQQVYR 15 1 A0A087X0K9;G5E9E7;Q07157-2 A0A087X0K9 TJP1 Tight junction protein ZO-1 1 IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR 152.0 8.4552e-15 159338000.0 15767.4 15184.3 16216.7 15699.7 16489.1 16511.1 16375.4 17223.300000000003 17331.3 17494.7 19140.300000000003 True False 17368.094840653615 16463.93425030549 17317.26278093902 16669.434812394313 15330.962500306869 16376.639075837753 16998.57480796271 16879.767770082533 16602.92573221924 16390.081656335824 16786.16444035849 1.0346672643630255 0.9808038226244066 1.0316390526536023 0.9930460809925388 0.9133094433083878 0.9756033985026307 1.0126538953171176 1.0055762190378044 0.9890839441737688 0.9764042116095101 1.0 14.034984998447385 -5.321708423910975 0.001193420847418274 1.1942628668906192 0.7907830308585324 0.0 0.03161142641898091 4178226.17277023 813.9396745876776 136540.77931681857 138647.83258300295 4.767509598482196e-06 5.321708423910975 -0.4034798360320868 IDS(ph)PPIR ddPTM_A549_MK2206_60min_R1 1 IDSPPIR 7 0 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 IDS(1)PPIR 49.418 0.054666 3191900.0 482.06 647.51 589.07 393.04 635.95 553.22 551.26 601.42 729.09 732.28 799.91 True False 563.4199427645468 680.4654932611761 672.6089837792056 489.3348176442362 542.4025974378711 611.7613732022845 651.4168063749813 686.673126771504 563.952279117486 566.8574394094524 601.2702706071022 0.9370493941030247 1.1317131854433955 1.1186466663320518 0.8138350448462305 0.9020944888730447 1.0174482310335906 1.0834009899030035 1.1420373837511884 0.9379347469617344 0.9427664514945945 1.0 9.23186981701313 IDS(ph)PPIRR ddPTM_A549_MK2206_60min_R1 2 IDSPPIRR 8 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 IDS(1)PPIRR;IDS(1)PPIRR 70.1 0.0028257 20789200.0 575.36 793.5799999999999 874.25 488.55 844.65 874.06 656.15 660.19 831.97 937.96 1229.7 True False 672.4667017985515 833.9698323457618 998.2317959987271 608.2447719318427 720.4031039010893 966.552449045929 775.3639616568295 753.7739542470806 643.5301233830868 726.0741845584882 924.3315520065433 0.7275167664013606 0.9022410092302661 1.0799499312035392 0.6580374440442524 0.7793773806998525 1.0456772214988577 0.8388374928602899 0.8154800651463043 0.6962113561807 0.7855127123836928 1.0 9.852266620029319 -11.141788019985922 1.532946335662519 0.9994873962400885 0.8244708357286382 0.0 0.14097529484234664 0.5397959021646417 2.2839262209478117 0.0943403677342484 0.020463437055215902 7.214595391140267e-12 11.141788019985922 -0.17501656051145031 IDS(ph)PPIRR ddPTM_A549_PD325901_60min_R1 2 IDSPPIRR 8 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 IDS(1)PPIRR;IDS(1)PPIRR 86.18 0.0011877 38325000.0 3988.9 4320.4 3879.1 3766.5 4843.7 4047.7 4076.7 4246.7 4108.3 4924.8 4860.200000000001 True False 4393.850191527021 4684.495270445117 4142.359052923256 3999.1481506578552 4503.495221857856 4014.736873210659 4231.841049355837 4161.996237028299 3935.6424379980936 4613.847287528373 4262.426211346234 1.0308331390772107 1.0990208482613422 0.9718312640572244 0.9382328167963229 1.0565567586530686 0.9418900584187837 0.9928244712110249 0.9764383078232304 0.9233338579613958 1.0824462544939042 1.0 12.057459143914135 -5.775761593916314 24.465282200796025 0.9693212033468541 1.0649269751860466 0.2013574241549917 0.05055729512358308 101.00672136932792 172541.49465537322 0.005471632166949766 0.017134959110335066 1.6758625888265042e-06 5.775761593916314 0.0956057718391925 IDS(ph)RPPSPEPPKQEYWGSK ddPTM_A549_MK2206_60min_R1 3 IDSRPPSPEPPKQEYWGSK 19 2 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 IDS(0.538)RPPS(0.462)PEPPKQEYWGSK;IDS(0.525)RPPS(0.472)PEPPKQEY(0.002)WGS(0.001)K;IDS(0.5)RPPS(0.5)PEPPKQEYWGSK 57.278 0.0013510999999999998 47597000.0 8410.7 9189.2 9577.599999999999 8528.5 13545.500000000002 11325.6 10618.6 10615.5 16393.8 14519.199999999999 14327.3 True False 9830.220538127569 9656.891029753362 10935.847697291858 10617.982882858914 11552.974893615356 12524.06747467516 12547.862170615277 12120.279633605294 12680.630475519134 11239.302635977656 10769.435996636048 0.9127887979647352 0.8966942217558839 1.015452220590548 0.9859367645785312 1.072755796796049 1.1629269609464405 1.1651364263211872 1.1254330902185776 1.177464676839165 1.0436296422104534 1.0 13.394655076398841 -6.292795126851999 1.2281802663173873 1.100628995280326 0.904865009675997 0.648918398517343 0.05610517460109601 0.33750364149435047 0.910346453051401 0.011438764201251329 0.051306959250098386 5.095711983918726e-07 6.292795126851999 -0.19576398560432906 IDSLS(ph)LNGEFGYQK ddPTM_A549_PD325901_60min_R1 2 IDSLSLNGEFGYQK 14 0 Q8TEQ0;Q8TEQ0-2 Q8TEQ0 SNX29 Sorting nexin-29 1 IDSLS(1)LNGEFGYQK;IDS(0.001)LS(0.999)LNGEFGYQK 150.57 1.746e-13 4656200.0 5119.4 6123.1 5101.1 5687.9 5396.6 5561.9 4527.1 5696.8 7420.4 5472.4 6446.799999999999 True False 5639.11771929691 6639.115126021318 5447.291321406211 6039.228664841848 5017.561433259311 5516.6057304420665 4699.381267824174 5583.172854946856 7108.546393136103 5126.871730074372 5653.884469632293 0.99738821151817 1.1742573025113654 0.963459962909444 1.068155654272613 0.887453831115448 0.9757195712208894 0.8311774485427014 0.9874932685545244 1.2572853993244781 0.9067874940868405 1.0 12.465026688384508 -8.592743919009736 24.808781003210754 1.1215433683133602 0.9850195211337901 0.0 0.11906150615142504 51.87836230550497 18420.86345545391 0.020690415925530236 0.02346072760227844 2.5542069424254975e-09 8.592743919009736 -0.1365238471795701 IDSNIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 IDSNISPK 8 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 IDS(0.007)NIS(0.993)PK;IDSNIS(1)PK 113.46 0.0013591 331360000.0 19330.6 18153.8 17629.3 15322.3 22950.4 20508.3 17537.6 19882.8 24971.4 23463.6 21907.5 True False 22593.13269220503 19077.750878850897 20129.399829797378 19076.264187844194 19574.426562211032 22678.47469369224 20723.95490962862 22701.24778852125 19315.417771131673 18163.156463822084 16467.263133758912 1.3720028949976335 1.1585259022029182 1.2223889098201666 1.1584356205942121 1.1886873005680125 1.3771854199135227 1.258494185785082 1.378568351287366 1.1729585914938025 1.1029857430641576 1.0 14.007313177998443 -9.777448912569131 0.928816770334293 1.0244507425458218 1.2543669446642325 0.45035419681491984 0.08576804779022712 0.2657182167556164 0.4747387912099951 0.028889651196391728 0.017062817565071314 1.6693641682384363e-10 9.777448912569131 0.22991620211841068 IDSNIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 IDSNISPK 8 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 IDSNIS(1)PK;IDS(0.001)NIS(0.999)PK 110.18 0.0016146 459060000.0 26624.0 24954.0 27297.0 26310.0 28720.0 20802.9 24893.0 24760.0 23506.0 27402.0 26809.0 True False 29326.848880447116 27056.961156070603 29149.538570195687 27935.10894565465 26702.80627862122 20633.48807957952 25840.316736972258 24266.142376155767 22518.124564316895 25671.83304354542 23511.66295625306 1.2473319703082708 1.150788917245628 1.2397905934783402 1.1881383719064051 1.1357259726079671 0.8775852272963928 1.0990424958477842 1.0320895812987165 0.9577427426641496 1.0918765334171248 1.0 14.521088962517124 -7.058714814513621 5.059757562348664 0.987484461721601 1.201001295923877 0.6705461011427416 0.06398050762598165 0.07220758359333672 3.8481568017176953 0.007911268392160048 0.014088155783825272 8.735448053845997e-08 7.058714814513621 0.21351683420227596 IDSNIS(ph)PKK ddPTM_A549_MK2206_60min_R1 3 IDSNISPKK 9 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 IDS(0.093)NIS(0.907)PKK;IDS(0.001)NIS(0.999)PKK;IDS(0.003)NIS(0.997)PKK 74.76 0.00088957 43695800.0 8330.5 9447.3 9419.4 8523.42 10252.4 7525.200000000001 8446.099999999999 8623.9 10889.699999999999 11489.3 10498.699999999999 True False 9736.484738829316 9928.127217319137 10755.212558456287 10611.658282630864 8744.285541272151 8321.51166917652 9980.647041910772 9846.364234586097 8423.200337277547 8893.859150334598 7891.583040620552 1.2337809396052037 1.258065354722345 1.3628713659978866 1.3446805575014793 1.1080521482524432 1.0544793897932752 1.2647205244546151 1.2477045713013026 1.0673651020233312 1.1270057103315017 1.0 12.946099016557275 -8.378078674546055 0.33769091622334946 0.9806001981955597 1.311044012352697 0.35545327489159817 0.09356999869645534 0.6867252386017169 0.21951837780238884 0.060564887626515136 0.07753544863163056 4.187177055092911e-09 8.378078674546055 0.3304438141571373 IDSNIS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 IDSNISPKK 9 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 IDS(0.001)NIS(0.999)PKK;IDS(0.001)NIS(0.999)PKK 84.289 0.00057097 132781000.0 8605.099999999999 8971.0 10439.400000000001 9853.0 12419.3 8753.5 10153.4 9896.0 10130.3 10384.8 10663.1 True False 9478.683417260194 9727.017653727238 11147.880461211893 10461.59743221342 11547.011212259076 8682.214398213677 10539.79319315367 9698.616516738188 9704.558720067202 9729.101955718947 9351.606298960123 1.013588801136143 1.0401440504193231 1.192081884633179 1.1186952377771426 1.2347623331344773 0.9284195806210446 1.1270569842451206 1.0371070174133241 1.0377424380179827 1.0403669321280986 1.0 13.190998478593482 -8.351543725354372 0.7265730454048628 1.0114583953022251 1.1055376498932907 0.1339558743191227 0.07921245772673055 0.7371785498916965 0.7922885350646287 0.018283900679566978 0.02366362633228139 4.450986475317701e-09 8.351543725354372 0.09407925459106559 IDSNIS(ph)PKKDSK ddPTM_A549_MK2206_60min_R1 4 IDSNISPKKDSK 12 2 Q9H501 Q9H501 ESF1 ESF1 homolog 1 IDS(0.186)NIS(0.807)PKKDS(0.006)K;IDS(0.001)NIS(0.981)PKKDS(0.018)K;IDS(0.003)NIS(0.728)PKKDS(0.27)K;IDSNIS(0.84)PKKDS(0.159)K 69.594 0.0007268 75423000.0 18090.1 22454.800000000003 22788.9 21410.6 20265.4 14314.6 15858.15 12585.43 22468.2 32223.899999999998 31733.4 True False 21143.266619518163 23597.65340779456 26020.708694121127 26656.19796115835 17284.38650541304 15829.361470737542 18739.370583781547 14369.453243762899 17379.18857434268 24944.498609529503 23853.120982714823 0.8863941383116969 0.9892899727836292 1.090872289331742 1.117514055308518 0.7246173998756046 0.6636180431989717 0.7856150395313486 0.602413967303303 0.7285918093039698 1.045754080885497 1.0 14.541890422791008 -6.761637402522227 24.999999948662275 0.8172133254402714 1.023740976543825 0.38353319164524835 0.13689726181771683 5.33321629349418 673442.0747968787 0.02222618661630937 0.043978354921514536 1.731261205943413e-07 6.761637402522227 0.20652765110355364 IDSNIS(ph)PKKDSK ddPTM_A549_PD325901_60min_R1 4 IDSNISPKKDSK 12 2 Q9H501 Q9H501 ESF1 ESF1 homolog 1 IDS(0.001)NIS(0.994)PKKDS(0.005)K;IDS(0.12)NIS(0.88)PKKDSK;IDSNIS(0.793)PKKDS(0.207)K;IDS(0.001)NIS(0.999)PKKDSK 102.38 6.9541e-05 167492000.0 14357.0 14164.7 16513.5 17591.2 17534.0 19937.300000000003 19691.1 19617.3 18265.4 15869.3 16615.9 True False 15814.51207093521 15358.408980018978 17634.205413742402 18677.768471486124 16302.472329016175 19774.937238990755 20440.455585883363 19226.017562025874 17497.768757639496 14867.309689728318 14572.24963686842 1.0852485007478745 1.0539490718825966 1.210122380083793 1.281735417449243 1.1187340826065877 1.3570270707522956 1.4026973250697083 1.3193582350787636 1.2007596077251783 1.0202480783827215 1.0 13.830935994729552 -10.240110815239795 0.9265945474550372 1.0144016258435438 1.2276531925902263 0.3760582631488588 0.10601331071658039 0.4449038299273279 0.7495833960177767 0.053113845015173716 0.022032087108884744 5.7529312593962704e-11 10.240110815239795 0.21325156674668255 IDSQTNS(ph)S(ph)HLK ddPTM_A549_PD325901_60min_R1 1 IDSQTNSSHLK 11 0 Q5TG12;E9PGC5;Q15262;Q15262-2;Q15262-3;Q15262-4 Q5TG12 PTPRK Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa 2 IDS(0.151)QT(0.021)NS(0.918)S(0.91)HLK 51.998000000000005 0.027117000000000002 4103300.0 3265.3 3205.9 3331.3 3821.1 4250.4 3852.1 4125.7 3202.6 4274.1 3724.0 4504.6 True False 3596.7908522131866 3476.0724441070265 3557.3820507342525 4057.1206686522605 3951.8665670839737 3820.7297747596854 4282.705771169668 3138.7216306089017 4094.4744405831216 3488.8660044581857 3950.5627570121046 0.9104502506203741 0.8798929818130657 0.9004747600629883 1.0269728436666445 1.0003300314795798 0.9671355727682163 1.084074860870903 0.7944998785395284 1.0364281476899915 0.8831313964739773 1.0 11.947842464261011 -6.249879769814446 21.7025988098941 1.002156901074358 0.8952346005448594 0.08980191109768532 0.07834552663282822 112.94562497868525 212044.9384554835 0.009224067949096087 0.02409650992520538 5.624970254448847e-07 6.249879769814446 -0.10692230052949869 IDSRPPS(ph)PEPPK ddPTM_A549_PD325901_60min_R1 2 IDSRPPSPEPPK 12 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 IDS(0.002)RPPS(0.998)PEPPK;IDS(0.034)RPPS(0.966)PEPPK 82.102 0.00018908 9772100.0 3686.2 4247.3 4363.8 3502.3 4892.1 4097.9 3953.7 4424.0 4699.0 5105.8 5359.8 True False 4060.4203103629843 4605.234876900649 4659.953709661134 3718.6291166995925 4548.495772828793 4064.5280610544146 4104.160217047656 4335.759849439141 4501.517371212678 4783.418916638718 4700.578578571568 0.8638128780301939 0.9797166029506326 0.9913574747807365 0.7911002985146619 0.9676459390688474 0.8646867599625493 0.873118095665331 0.9223885479129063 0.9576517647707569 1.0176234343671633 1.0 12.198622628912547 -9.052667253177335 1.3615276741712374 0.9868328365247806 0.9070494510454328 0.31281549704176925 0.057121202551968814 0.359210100487156 1.3599036603684254 0.011815893212278335 0.011221615550508737 8.857940256870966e-10 9.052667253177335 -0.07978338547934782 IDSRPPS(ph)PEPPKQEYWGSK ddPTM_A549_MK2206_60min_R1 1 IDSRPPSPEPPKQEYWGSK 19 2 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 IDS(0.196)RPPS(0.804)PEPPKQEYWGSK 77.19 7.893100000000001e-05 11401000.0 2722.1 2431.8 1464.8 1738.3 3534.7 3363.1 2667.2 2980.1 3853.8 3795.5 4077.9 True False 3181.523931044628 2555.568232942391 1672.5306660325264 2164.183578035253 3014.750312388775 3718.9810097548975 3151.795715203987 3402.5383011734843 2980.9204532540134 2938.0939139107677 3065.244885685519 1.0379346674395002 0.8337240019147304 0.5456434080823782 0.7060393732787354 0.9835267408706723 1.213273701922571 1.0282361875629105 1.110037999594454 0.9724901482340629 0.9585184947641419 1.0 11.581786621629085 -6.827262693887959 6.437716248838953 1.0173702275583871 0.7682458189503133 0.47333100164031117 0.12930120123166183 0.1465070533082797 11.049424875145785 0.01904919742290522 0.0364366917251662 1.4884604727878808e-07 6.827262693887959 -0.24912440860807383 IDSRPPS(ph)PEPPKQEYWGSK ddPTM_A549_PD325901_60min_R1 2 IDSRPPSPEPPKQEYWGSK 19 2 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 IDS(0.196)RPPS(0.802)PEPPKQEY(0.001)WGS(0.001)K;IDS(0.009)RPPS(0.99)PEPPKQEYWGSK 92.426 8.4449e-07 72395000.0 6590.0 4897.2 6093.2 5882.1 5753.1 6091.5 5684.1 5075.1 7247.1 7090.0 7675.200000000001 True False 7259.011948698412 5309.904230724897 6506.721193388151 6245.423957781647 5349.0221031175415 6041.892843630386 5900.411535958867 4973.873149161072 6942.529589469116 6642.3361900130285 6731.199057101481 1.0784129078815583 0.7888496812648701 0.9666511327611825 0.9278323081520912 0.7946611083316977 0.89759533069463 0.8765765929524658 0.7389282514106588 1.0313956741696235 0.9867983599452906 1.0 12.716647805790402 -8.825892354477537 24.999999193819963 1.0148259797584116 0.8820209426796716 0.2733888188919169 0.0885084526108617 47.5102968749344 18427.830689109436 0.014065112699697385 0.014973453645164562 1.4931644639024308e-09 8.825892354477537 -0.13280503707874003 IDSVAAQPT(ph)ATSPVVYTR ddPTM_A549_MK2206_60min_R1 2 IDSVAAQPTATSPVVYTR 18 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IDSVAAQPT(0.447)AT(0.231)S(0.32)PVVYT(0.002)R;IDSVAAQPT(0.419)AT(0.29)S(0.29)PVVYT(0.001)R 96.544 2.3285e-06 4510200.0 1179.7 1467.6 1392.3 1436.6 2073.6 1479.7 1583.2 1754.1 2300.7 2073.1 2706.5 True False 1378.8045191041292 1542.2945713735724 1589.7490758581964 1788.5670644914253 1768.5761868813102 1636.2808718546344 1870.846946727262 2002.749046705953 1779.5951234629465 1604.7852701695203 2034.4013544000225 0.6777445935739463 0.7581073262844046 0.7814333550358056 0.879161361460508 0.8693349436954595 0.8043058309589063 0.9196056337069265 0.9844414635167188 0.8747512478862745 0.7888243225451436 1.0 10.990388612275387 -2.76666061504072 0.18535306899661558 0.9860198087119758 5.677454114968299e-14 0.4640898682946484 0.06834985167630403 14.174136427474702 0.1941462885313481 0.0495302364047992 3.7845555557458495 0.0017113521506331383 2.76666061504072 -0.9860198087119191 IDSVAAQPTATS(ph)PVVYTR ddPTM_A549_PD325901_60min_R1 1 IDSVAAQPTATSPVVYTR 18 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IDSVAAQPT(0.01)AT(0.149)S(0.839)PVVYT(0.001)R 98.165 1.2347e-06 3892500.0 2235.6 2105.5 2348.4 2423.5 2818.0 2984.8 2496.7 2540.0 2806.8 2710.6 2726.4 True False 2462.556466238263 2282.937874252892 2507.776546076403 2573.1940908321553 2620.0734015722355 2960.4927784072875 2591.7132847466632 2489.337707408549 2688.8399569099233 2539.4522534061093 2391.07008407357 1.0298972341466899 0.9547766455944038 1.0488093020694755 1.0761684101071216 1.095774406205828 1.2381455475213905 1.0839135590418436 1.041097759530145 1.1245341467904841 1.062056804742313 1.0 11.22344070181475 -5.949062318971793 5.360932060545278 1.0764944826530412 0.9927858143638821 0.2670082443234396 0.0595707974835849 0.24602226160050178 15.524317085282076 0.009675806326269984 0.030894423243907766 1.1244436106513596e-06 5.949062318971793 -0.08370866828915902 IDTIEIITDR ddPTM_A549_MK2206_60min_R1 2 IDTIEIITDR 10 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 152.97 5.7308000000000006e-08 8343500.0 1889.5 2359.8 1768.43 1895.26 2672.1000000000004 2742.0 2342.8 2811.7 3224.2 2199.3 2645.3999999999996 False True 2208.401406160252 2479.903740479256 2019.2199656826187 2359.598785081454 2279.0376297094676 3032.1566200077095 2768.4564343056013 3210.267085470117 2493.923847989409 1702.4766025198135 1988.4741706742352 1.1106010018784633 1.2471390260193278 1.0154620037121018 1.1866378854100885 1.1461238286724693 1.5248659825335278 1.3922516445697135 1.6144374077444548 1.2541897122776253 0.8561723494464863 1.0 10.957446107010286 -10.292242429931335 1.0590362196475192 1.0223928606987154 1.2764843678457038 0.34084933001775974 0.1766526154219683 0.5092854670299118 1.126582422595963 0.07594515678820428 0.03322646674779396 5.102201076711702e-11 10.292242429931335 0.25409150714698847 IDTIEIITDR ddPTM_A549_PD325901_60min_R1 2 IDTIEIITDR 10 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 135.55 1.755e-06 13077000.0 2725.3 2626.15 2704.8 2882.3 3319.1 3125.4 3314.3999999999996 3639.4 3465.9 3320.4 3726.9 False True 3001.970449740178 2847.464876974226 2888.363993283707 3060.3331248217555 3085.9778662733906 3099.947778623068 3440.531305709271 3566.8093119459327 3320.2402759919146 3110.749377336993 3268.51492676562 0.9184508919195291 0.8711800131786314 0.8836930710124998 0.9363069141159247 0.9441529059581624 0.9484269914871221 1.0526282984162079 1.0912629716748736 1.0158253367003833 0.9517317335354055 1.0 11.674419570401103 -7.167332556025296 1.38323189340618 1.0172619586993055 0.8954718146304415 0.6612624014884537 0.03792934497413016 0.17428863684705373 0.6537976107624949 0.005667356382558758 0.0119146988921692 6.802482668900621e-08 7.167332556025296 -0.12179014406886401 IDVPPTANT(ph)PTPVRK ddPTM_A549_PD325901_60min_R1 2 IDVPPTANTPTPVRK 15 1 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;A0A087X044;Q9UPQ3-3 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 IDVPPT(0.139)ANT(0.852)PT(0.009)PVRK;IDVPPT(0.42)ANT(0.577)PT(0.003)PVRK 95.76700000000001 1.1594000000000001e-05 21172600.0 7705.900000000001 8160.8 8812.300000000001 9815.400000000001 10513.0 9513.3 9457.6 10013.6 10340.8 10371.0 10103.5 True False 8488.197295216252 8848.539256330094 9410.355670664747 10421.674965609222 9774.603147881096 9435.826838924564 9817.514143397304 9813.870892482772 9906.212137100669 9716.173290074072 8860.833551363452 0.9579456882936414 0.9986125125856284 1.0620169779869906 1.1761506302085538 1.1031245639838296 1.0648915572364674 1.1079673358593496 1.1075561724069032 1.1179774543419068 1.0965303922878684 1.0 13.113226706224921 -5.677047836776601 3.223505758297667 1.0760468376001668 0.9663073996044506 0.484725808820055 0.0437268461201129 0.22268642726639737 4.42887097619504 0.007954000775101272 0.03817419208021788 2.1035467250174076e-06 5.677047836776601 -0.10973943799571628 IDVTAPDVS(ph)IEEPEGK ddPTM_A549_PD325901_60min_R1 2 IDVTAPDVSIEEPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IDVTAPDVS(1)IEEPEGK;IDVTAPDVS(1)IEEPEGK 171.46 5.2391e-28 5125800.0 3022.3 3055.2 3034.1 3347.2 3520.1000000000004 3186.4 3526.4 3569.3 3380.8 3991.7 4119.299999999999 True False 3329.121671100336 3312.672426225332 3240.01227152547 3553.9489419572483 3272.8603196857457 3160.451014847553 3660.599081720121 3498.107511438318 3238.7167330486955 3739.663380772218 3612.652214394169 0.9215173433622699 0.9169641110280131 0.8968514208525358 0.9837506438613093 0.9059439230395431 0.874828471518826 1.0132719300061361 0.9682934597192994 0.8964928093948337 1.0351573190112209 1.0 11.818842659631887 -7.7476442735884605 24.99955856359033 0.9556786469185268 0.9183217345050116 0.2716619331816037 0.04478146984049734 387.07512742045435 701458.1505804802 0.007197983102809579 0.01064491738750643 1.787951469002484e-08 7.7476442735884605 -0.03735691241351513 IDYIAGLDSR ddPTM_A549_PD325901_60min_R1 2 IDYIAGLDSR 10 0 H3BQF1;P07741-2;P07741;H3BQB1 H3BQF1 APRT Adenine phosphoribosyltransferase 0 ; 103.55 0.0010228 4087900.0 1767.84 1717.53 1855.03 1530.76 2271.02 2149.7 2167.8 1852.63 2351.0 2131.3999999999996 2292.8 False True 1947.3098153849758 1862.27228077206 1980.9234910015798 1625.3115685918028 2111.511389793677 2132.193555930764 2250.2968152656763 1815.6778412898805 2252.195645822729 1996.8230402529994 2010.800135256705 0.9684253453346701 0.9261349490282964 0.985141912549498 0.8082909584568485 1.050085163995732 1.0603707044502269 1.1191051640636558 0.9029628601343243 1.1200494799724126 0.9930489884307068 1.0 10.973553975851058 -6.864387821391406 16.642552916138527 1.0508128295178807 0.9268076951371176 0.35226881433605906 0.07167399062933975 0.9406049929656317 147.3221033984413 0.01030264493368962 0.019470703292690957 1.366508000206699e-07 6.864387821391406 -0.1240051343807631 IDYLLPGPGPAHS(ph)PQPSK ddPTM_A549_MK2206_60min_R1 2 IDYLLPGPGPAHSPQPSK 18 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.936)PQPS(0.064)K;IDYLLPGPGPAHS(0.988)PQPS(0.012)K 85.805 1.5253e-05 6877900.0 2978.2 3874.3 3479.7 3251.2 4584.5 3893.3999999999996 3705.7 4226.5 6128.700000000001 5033.799999999999 4751.799999999999 True False 3480.847350000777 4071.4853215267335 3973.1737838567597 4047.7441459519146 3910.1261230504283 4305.397003770246 4378.977722642253 4825.619318113401 4740.559235522825 3896.661083874067 3571.796916991698 0.9745367474398512 1.1398983246102055 1.112373932839137 1.1332514809831566 1.0947224083343696 1.2053868413651059 1.2259873179829028 1.3510340677984907 1.3272197008097264 1.0909525861722233 1.0 11.802434339595456 -3.974817837414643 0.711021819714717 1.176895390761628 7.52731710445295e-18 0.2624602446241807 0.09767452394650372 21.884445633910023 1.9123664127520437 0.021508758776257776 31.55933269823757 0.00010596981168933065 3.974817837414643 -1.176895390761628 IDYLLPGPGPAHS(ph)PQPSK ddPTM_A549_PD325901_60min_R1 2 IDYLLPGPGPAHSPQPSK 18 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.992)PQPS(0.008)K;IDYLLPGPGPAHS(0.989)PQPS(0.011)K 103.58 1.9419e-09 15307600.0 4198.6 4349.2 4600.200000000001 5569.9 5712.1 4914.8 4837.1 5442.4 6223.0 5884.4 5936.299999999999 True False 4624.838781154043 4715.722347518726 4912.397235249814 5913.940072839291 5310.901801675224 4874.775498296744 5021.178487462682 5333.847062519794 5961.468951065437 5512.857979762016 5206.172733306166 0.8883375596754455 0.905794446148547 0.9435716959260798 1.1359477250927974 1.0201163260871198 0.9363453246778908 0.9644663641949497 1.0245236444801071 1.1450770568804431 1.0589080044336312 1.0 12.346007463739895 -8.521328363941118 24.861064376794126 1.0693660712264552 0.975517989264058 0.2748000238302094 0.06975208672435695 65.53216189937991 1050845.9927948616 0.013969698709181988 0.01595474915806035 3.010728793766138e-09 8.521328363941118 -0.09384808196239725 IDYLLPGPGPAHS(ph)PQPSKR ddPTM_A549_MK2206_60min_R1 2 IDYLLPGPGPAHSPQPSKR 19 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.882)PQPS(0.118)KR;IDYLLPGPGPAHS(0.959)PQPS(0.041)KR 89.51100000000001 1.2440999999999999e-06 36763000.0 1304.94 1646.56 1461.2600000000002 1073.13 2067.2799999999997 1080.4 1174.3600000000001 1150.3600000000001 2073.83 1902.5 2006.17 True False 1525.1819692801066 1730.36287097361 1668.488640801946 1336.046898174637 1763.1858505092562 1194.7272108885227 1387.7260108379417 1313.4270528297475 1604.1108162260018 1472.7239286563652 1507.9826215247335 1.011405534460326 1.1474687083754493 1.1064375789124967 0.8859829543816288 1.169234860761515 0.7922685539177662 0.9202533179293543 0.8709828840744402 1.063746221825867 0.9766186344821944 1.0 10.558404087284213 -6.155970784890895 22.06770187114175 0.9966872893986074 1.094345722817431 0.1728116255059996 0.10454129359718783 19.385484271965407 4043.5318303620697 0.014480363484330263 0.038311456819918634 6.982793759426957e-07 6.155970784890895 0.09765843341882352 IDYLLPGPGPAHS(ph)PQPSKR ddPTM_A549_PD325901_60min_R1 4 IDYLLPGPGPAHSPQPSKR 19 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.994)PQPS(0.006)KR;IDYLLPGPGPAHS(0.972)PQPS(0.028)KR;IDYLLPGPGPAHS(0.965)PQPS(0.035)KR;IDYLLPGPGPAHS(0.969)PQPS(0.031)KR 97.25299999999999 6.5663e-07 80626100.0 8752.599999999999 8793.8 10306.170000000002 9938.199999999999 11915.0 11210.3 10859.7 10871.3 10650.400000000001 11045.8 12386.5 True False 9641.157508676437 9534.88438784378 11005.608672234814 10552.06004271018 11078.13150451853 11119.007033563115 11272.971826155856 10654.463393130134 10202.800725763664 10348.36630291198 10863.039024492844 0.8875193660759723 0.8777363651502604 1.0131242875424196 0.9713727455934291 1.0198003965134175 1.0235632044120564 1.0377364751004519 0.980799513755549 0.9392215845639011 0.9526216631993649 1.0 13.40714014495911 -5.753254871696025 24.995400277236772 0.9846408458432806 0.8826278098021397 0.6603550343566299 0.03006703847398387 99.15141442262947 302799.9476281238 0.004898785745064326 0.01833071049910068 1.7650017011367242e-06 5.753254871696025 -0.10201303604114087 IEDFLER ddPTM_A549_MK2206_60min_R1 2 IEDFLER 7 0 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 ; 77.67399999999999 0.04742 11341400.0 987.99 1116.22 765.28 1160.71 1553.46 1081.58 1092.18 1220.95 1355.1100000000001 1354.0 1560.32 False True 1154.7385579636243 1173.0308302389 873.8082114291177 1445.0840021062515 1324.9480918560191 1196.0320777053023 1290.6149685930902 1394.023401502556 1048.1797486660037 1048.1304596061595 1172.8494813587452 0.984558186124498 1.0001546224669382 0.7450301384085634 1.232113775104477 1.1296829754497293 1.0197660456137134 1.100409719325547 1.1885782648661625 0.8937035530353719 0.8936615279838819 1.0 10.195802160406233 -8.807413185275172 24.99999581449375 0.9498044712316159 1.0476020796318914 0.15179185294723363 0.12461369157567377 208.94347096756277 113619.94492405654 0.022046436528876678 0.02347025659150789 1.5580694591264893e-09 8.807413185275172 0.09779760840027552 IEDFLER ddPTM_A549_PD325901_60min_R1 1 IEDFLER 7 0 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 123.69 0.017238 8952900.0 1487.9 1419.6 1780.3 1683.2 2290.9 1815.7 1936.2 1662.7 1818.4 1663.9 2206.7 False True 1638.9505126659117 1539.2346740866326 1901.1218638135833 1787.1674411754434 2129.995087175954 1800.9135411934158 2009.883150529295 1629.5361441370828 1741.9789716563366 1558.8410700370503 1935.2898894238374 0.8468759753371367 0.7953509613719338 0.9823447506252273 0.9234623975158098 1.1006077687979257 0.9305652610677219 1.038543714568604 0.8420113973840985 0.9001126814003807 0.805481947978935 1.0 10.91833397026155 -5.761840310116925 24.999999732140715 0.9581637478672839 0.8211134382030758 0.25489201444066045 0.08121382913905074 7.771525870599833 484766.3025417368 0.009390424144238383 0.032106244388317086 1.7304525288545308e-06 5.761840310116925 -0.13705030966420806 IEDLSQQAQLAAAEK ddPTM_A549_MK2206_60min_R1 2 IEDLSQQAQLAAAEK 15 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;Q13765;E9PAV3-2;E9PAV3 F8W1N5 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form 0 ; 253.69 2.916399999999999e-76 5073200.0 2938.6 3568.3999999999996 3133.3 3116.8 4144.5 3210.2 3229.5 3468.7 4479.9 4220.6 4735.700000000001 False True 3434.563838127823 3750.016318131274 3577.649055078998 3880.416139918469 3534.849540185953 3549.9012332417014 3816.258346674894 3960.3988474482317 3465.209802930263 3267.1635286659957 3559.694991329092 0.9648477879408011 1.053465627607359 1.005043708462 1.0900979295615518 0.9930203426968719 0.9972487086362043 1.0720745333436583 1.1125669073039115 0.9734569426231794 0.9178212000253783 1.0 11.79753791536265 IEDLSQQAQLAAAEK ddPTM_A549_PD325901_60min_R1 2 IEDLSQQAQLAAAEK 15 0 F8W1N5;F8VZJ2;F8VNW4;F8W0W4;H0YHX9;Q13765;E9PAV3-2;E9PAV3 F8W1N5 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form 0 ; 249.62 4.426799999999999e-76 6907300.0 5720.9 5650.9 6597.4 5861.6 7337.6 6733.700000000001 6334.799999999999 6630.1 6639.299999999999 7329.5 7581.4 False True 6301.681556496012 6127.121174835271 7045.139237389057 6223.657719340525 6822.232289345794 6678.862979751118 6575.87428053557 6497.857454287173 6360.27330978768 6866.714119139705 6648.935862454289 0.9477729499664481 0.9215190673494625 1.059588990348377 0.9360381643150963 1.0260637838108935 1.004501038649782 0.989011537570803 0.9772778063599263 0.9565851500694043 1.03275385132156 1.0 12.698907745756053 IEDPVY(ph)GIYYVDHINR ddPTM_A549_MK2206_60min_R1 1 IEDPVYGIYYVDHINR 16 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5;H7C4S7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 IEDPVY(1)GIYYVDHINR 60.918 0.0016858 898950.0 150.03 131.12 160.82 202.94 332.83 246.59 252.26 144.18 298.76 319.02 267.13 True False 175.3513961186678 137.7934479411985 183.62669423221658 252.6603091103228 283.87114789723483 272.6839901268058 298.09237669367025 164.61795653273154 231.0913370216846 246.95316043098754 200.79424858706003 0.8732889380675624 0.6862420059878073 0.9145017624974454 1.258304512645315 1.4137414288246133 1.3580268959176682 1.484566309997788 0.8198340225933153 1.1508862362732886 1.2298816433674593 1.0 7.6495741360865175 -6.051614181639085 4.891634489070323 1.1386053587774252 0.7818739840882515 0.4228075780862848 0.191951867170439 0.17313022475044176 9.062262328398408 0.029060515637549113 0.08272095954319758 8.879444935303737e-07 6.051614181639085 -0.3567313746891737 IEDPVY(ph)GIYYVDHINR ddPTM_A549_PD325901_60min_R1 2 IEDPVYGIYYVDHINR 16 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5;H7C4S7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 IEDPVY(1)GIYYVDHINR;IEDPVY(1)GIYYVDHINR 95.428 2.4164e-06 2605800.0 461.73 404.84 485.59999999999997 441.93000000000006 590.86 424.843 408.17 572.23 459.66999999999996 455.13 392.7 True False 508.60448969233937 438.9572875861038 518.5557361500174 469.2270124041489 549.3600319563421 421.38321946424765 423.70313270919405 560.8164237442493 440.3516684454843 426.39301412702844 344.4003895304033 1.47678256225503 1.274555142590375 1.505676973411901 1.3624462302262468 1.5951202398621134 1.223527127942021 1.230263221499028 1.6283849867560647 1.2786038629222007 1.2380735535997032 1.0 8.42794296425531 -9.956117068791134 0.5947540282193158 0.9945935020648172 1.4118847393196194 0.3027416090024959 0.149812279638869 0.4271208724031774 0.30166563997031326 0.08283671399970062 0.03134495079510976 1.1063255217278736e-10 9.956117068791134 0.4172912372548022 IEDPVY(ph)GIYYVDHINRK ddPTM_A549_MK2206_60min_R1 2 IEDPVYGIYYVDHINRK 17 1 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5;H7C4S7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 IEDPVY(0.993)GIY(0.007)Y(0.001)VDHINRK;IEDPVY(0.999)GIYYVDHINRK 97.631 3.2111999999999995e-07 2099200.0 124.64 379.09000000000003 422.92 93.602 428.82 335.94 178.48 258.37 419.26 432.78 314.53 True False 145.67618484456946 398.38406177569357 482.8964154003792 116.53449420195345 365.74114605441883 371.48894782107584 210.90750571745937 294.99473872493996 324.29827942064395 335.01469742123595 236.42352041361139 0.616166211338517 1.6850441152332905 2.0425058156463263 0.4929056719825593 1.5469744525188212 1.5712859159324508 0.8920749735410716 1.2477385422941893 1.371683658433391 1.4170108660726484 1.0 7.885229757845721 -10.903796765427042 0.8836331709824933 0.9779568738182028 1.2973068276040414 0.0 0.4565809234657162 1.8209897404599706 2.2212132288898676 0.4126522865027983 0.07449163559712112 1.247967382546324e-11 10.903796765427042 0.3193499537858385 IEDPVY(ph)GIYYVDHINRK ddPTM_A549_PD325901_60min_R1 2 IEDPVYGIYYVDHINRK 17 1 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5;H7C4S7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 IEDPVY(0.995)GIY(0.005)YVDHINRK;IEDPVY(0.992)GIY(0.007)Y(0.001)VDHINRK 108.36 1.6472e-09 2553000.0 412.57 493.68 422.62 556.78 766.83 791.9100000000001 544.4300000000001 724.0799999999999 656.46 802.48 549.87 True False 454.45380268201836 535.2841461701104 451.3015346205116 591.1710360608741 712.9705062198858 785.4609475169241 565.148581573527 709.6376563702286 628.8712691011433 751.8112758479064 482.2394759131212 0.9423820018498265 1.1099965326491552 0.9358452743130815 1.2258868582699307 1.478457367825135 1.628777789353832 1.1719251736980207 1.4715461753240515 1.3040642678834504 1.558999860856166 1.0 8.91360594393584 -6.276782987040506 20.976281661317092 1.234886553471421 1.0074668617059819 0.26458427728031486 0.20436479992366582 125.414409407245 171455.89834048258 0.03116500188319892 0.07284490150517246 5.287093769936875e-07 6.276782987040506 -0.2274196917654392 IEDS(ph)EPHIPLIDDT(ph)DAEDDAPTK ddPTM_A549_PD325901_60min_R1 2 IEDSEPHIPLIDDTDAEDDAPTK 23 0 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 2 IEDS(1)EPHIPLIDDT(1)DAEDDAPTK;IEDS(1)EPHIPLIDDT(1)DAEDDAPTK 115.66 5.226e-15 20919600.0 2762.4 3026.0 2702.8 2584.6000000000004 2622.8999999999996 3229.6000000000004 2800.5 2955.6 2720.2 3167.1 3105.9 True False 3042.836814428602 3281.0116397479246 2886.2282612567296 2744.2448719475115 2438.6765525137757 3203.299208370468 2907.0745599924016 2896.648239376656 2605.8794537503136 2967.1287654993307 2723.89398992228 1.117090762594407 1.2045298575814034 1.0595963983675742 1.0074712459811301 0.895290551517887 1.1759999545583881 1.0672495224659415 1.0634217961835237 0.956674328513301 1.0892967114274483 1.0 11.41145484146674 -2.0000000009566357 0.2696054968488261 0.9824578770571144 2.3028068667055765 0.08220927168941072 0.08303777598160118 39.72882022832122 0.4910443094471398 0.03177691224110797 24.807491190305594 0.00999999997797265 2.0000000009566357 1.3203489896484621 IEDS(ph)EPHIPLIDDT(ph)DAEDDAPTKR ddPTM_A549_PD325901_60min_R1 4 IEDSEPHIPLIDDTDAEDDAPTKR 24 1 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 2 IEDS(1)EPHIPLIDDT(1)DAEDDAPTKR;IEDS(1)EPHIPLIDDT(1)DAEDDAPTKR;IEDS(1)EPHIPLIDDT(1)DAEDDAPTKR;IEDS(1)EPHIPLIDDT(1)DAEDDAPTKR 201.51 5.4644e-62 210417000.0 14032.6 15950.5 16865.8 15987.7 17265.1 16137.199999999999 17466.2 18917.0 17941.7 20366.4 20423.6 True False 15457.179221745873 17294.70461328461 18010.414610294418 16975.223918298845 16052.458937361547 16005.783993471612 18130.88579887137 18539.685594900577 17187.67274294243 19080.46202824843 17911.626675867432 0.8629690368977784 0.9655574519418715 1.005515296640259 0.94772095385227 0.8962033001161884 0.8935974539395919 1.0122411619542826 1.035064314950207 0.9595818991749983 1.0652556785339762 1.0 14.128608743709705 -7.771162243798245 24.999839519029166 0.9874876118606908 0.9331676106550065 0.40289706362592903 0.04691824238241156 208.29099356154757 535565.9585288212 0.006768009755223648 0.009415029330623687 1.693704947693509e-08 7.771162243798245 -0.054320001205684254 IEDS(ph)EPHIPLIDDTDAEDDAPTK ddPTM_A549_PD325901_60min_R1 2 IEDSEPHIPLIDDTDAEDDAPTK 23 0 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 IEDS(1)EPHIPLIDDTDAEDDAPTK;IEDS(1)EPHIPLIDDTDAEDDAPTK 325.32 7.673599999999998e-197 213180000.0 21574.0 23227.0 24194.0 23531.0 27489.0 21397.0 24777.0 25239.0 24565.0 24794.0 27865.0 True False 23764.17659806062 25184.420805163583 25835.950330340867 24984.456427221576 25558.267471901774 21222.749926152734 25719.90229349462 24735.588345387532 23532.61847708861 23228.502608629482 24437.781650788595 0.9724359165511147 1.0305526567445575 1.0572134042087717 1.0223700655094174 1.04585055375012 0.8684401157773618 1.0524646901681705 1.0121863227544357 0.9629605016267597 0.9505160059354205 1.0 14.576825709441742 IEDS(ph)EPHIPLIDDTDAEDDAPTKR ddPTM_A549_MK2206_60min_R1 1 IEDSEPHIPLIDDTDAEDDAPTKR 24 1 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 IEDS(0.999)EPHIPLIDDT(0.001)DAEDDAPTKR 262.77 1.2755999999999996e-124 91078000.0 15314.0 14388.0 12809.0 11440.0 18548.0 14608.0 12274.0 14019.0 22102.0 19402.0 20480.0 True False 17898.62880864679 15120.287743883187 14625.508807489501 14242.800513561124 15819.613770387019 16153.808863994385 14504.026922770592 16006.236181386896 17095.932289641445 15019.074724725779 15394.250780754646 1.162682683526439 0.9822035485342386 0.9500630472886541 0.9252025783136504 1.0276312888292132 1.049340373497703 0.9421716671592111 1.0397541529853036 1.1105400667510354 0.9756288200463838 1.0 13.910104034448107 -8.504480769567866 24.489674875945436 1.0534072463518844 1.0012232911521568 0.0 0.06973528669000904 1034.8942382813864 1377556.5369116792 0.011642787897002188 0.01395113909461728 3.1298190559641744e-09 8.504480769567866 -0.05218395519972763 IEDS(ph)EPHIPLIDDTDAEDDAPTKR ddPTM_A549_PD325901_60min_R1 3 IEDSEPHIPLIDDTDAEDDAPTKR 24 1 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 IEDS(0.6)EPHIPLIDDT(0.4)DAEDDAPTKR;IEDS(1)EPHIPLIDDTDAEDDAPTKR;IEDS(1)EPHIPLIDDTDAEDDAPTKR 298.5 8.340899999999997e-158 151689500.0 16037.26 16281.83 18774.59 18886.0 21928.39 18977.79 17801.0 19914.609999999997 21684.93 21710.04 25566.05 True False 17665.350829193176 17653.956955187357 20048.746578181137 20052.54532678198 20388.215535238694 18823.241170306228 18478.426796080967 19517.397480840693 20773.587803475384 20339.264369341392 22421.58792654382 0.7878724239811772 0.7873642586343184 0.8941715744604515 0.894340998170016 0.9093118472265778 0.8395141874863516 0.8241355097872111 0.8704734715838303 0.9264994018948386 0.9071286313875536 1.0 14.452600834883961 -14.999999963981008 0.061886551621432244 1.5693636992237945 0.6355700908353666 0.3678499536512193 0.04815064910899324 106.83037155555508 0.4989618470993124 8.964213014237147 1.5094553472474013 1.000000082936798e-15 14.999999963981008 -0.9337936083884278 IEDSEPHIPLIDDT(ph)DAEDDAPTK ddPTM_A549_PD325901_60min_R1 2 IEDSEPHIPLIDDTDAEDDAPTK 23 0 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 IEDSEPHIPLIDDT(1)DAEDDAPTK;IEDSEPHIPLIDDT(1)DAEDDAPTK 267.07 7.087299999999998e-124 78840000.0 6917.799999999999 7039.9 6996.799999999999 6997.6 8743.8 7584.0 6701.8 7273.3 7555.3 7662.200000000001 8909.3 True False 7620.089963384802 7633.177079531195 7471.644923176365 7429.825859297341 8129.665652472437 7522.238418467182 6956.840666365679 7128.228325706533 7237.777015263485 7178.407384360767 7813.512580705937 0.9752451134719157 0.9769200472499336 0.9562466107274529 0.9508944642444115 1.0404623488477107 0.9627217388811783 0.8903602054144438 0.9122949828363252 0.9263153979089856 0.9187170699752314 1.0 12.93175554538828 -7.513175056149027 24.873376615628075 0.9531960807784657 0.9793275473366895 0.19590533511681463 0.03671056737290425 982.726606856175 2519016.9142055833 0.006610052194570673 0.010139855682154697 3.067785171140548e-08 7.513175056149027 0.026131466558223737 IEDSEPHIPLIDDT(ph)DAEDDAPTKR ddPTM_A549_MK2206_60min_R1 5 IEDSEPHIPLIDDTDAEDDAPTKR 24 1 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 IEDSEPHIPLIDDT(1)DAEDDAPTKR;IEDS(0.109)EPHIPLIDDT(0.891)DAEDDAPTKR;IEDS(0.028)EPHIPLIDDT(0.972)DAEDDAPTKR;IEDS(0.003)EPHIPLIDDT(0.817)DAEDDAPT(0.18)KR;IEDS(0.006)EPHIPLIDDT(0.883)DAEDDAPT(0.111)KR 321.55 8.039399999999996e-197 809901600.0 41736.810000000005 41019.850000000006 39206.67 37705.76 55365.47 42104.60999999999 42016.049999999996 41259.98 63845.54 61557.85 64695.86 True False 48780.96316096498 43107.585155054716 44766.765352278446 46943.6728926759 47221.282705194644 46560.091883421876 49649.822420439596 47108.70851838933 49384.627130377055 47651.88893121641 48630.09244709932 1.0031024147040186 0.8864384784369455 0.9205568630365351 0.9653214816266711 0.9710300829997968 0.9574337522403596 1.020969114431554 0.9687151750664472 1.01551579783852 0.9798848106869832 1.0 15.569561713730316 -7.253405570183378 0.8918034819195089 1.005994451593025 0.9345741059264038 0.3234095226440721 0.0317024088364102 0.3498984217454196 0.5469982791353212 0.005030222992441495 0.01226839827493004 5.579489052833806e-08 7.253405570183378 -0.07142034566662125 IEDSEPHIPLIDDT(ph)DAEDDAPTKR ddPTM_A549_PD325901_60min_R1 3 IEDSEPHIPLIDDTDAEDDAPTKR 24 1 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 IEDSEPHIPLIDDT(1)DAEDDAPTKR;IEDSEPHIPLIDDT(1)DAEDDAPTKR;IEDS(0.084)EPHIPLIDDT(0.916)DAEDDAPTKR 296.37 2.0081999999999992e-157 1619620000.0 50595.0 52890.0 52599.0 58779.0 61608.0 57853.0 57236.0 63254.0 63593.0 64956.0 70026.0 True False 55731.367153929605 57347.225917471114 56168.68444348181 62409.64533320542 57280.866616061845 57381.86434910103 59414.147300741 61992.349348196934 60920.40736061455 60854.66707453968 61413.24593138792 0.9074812169380165 0.9337924587399362 0.9146021121605356 1.0162245031459614 0.9327119214649092 0.9343564809000516 0.9674484127922444 1.009429617471384 0.9919750444175515 0.9909045866510248 1.0 15.906262236749495 -2.309128613013676 0.18978603324756824 1.0075305296047097 0.6002666525770007 0.5086729140591562 0.02673973080829654 24.849417716957674 0.2979871664516254 0.024244222261563236 2.925619982557802 0.0049076251903629135 2.309128613013676 -0.40726387702770894 IEDSGENLETEPLESQDRELLDT(ph)SFEDLSKPK ddPTM_A549_MK2206_60min_R1 2 IEDSGENLETEPLESQDRELLDTSFEDLSKPK 32 2 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 IEDSGENLETEPLES(0.004)QDRELLDT(0.498)S(0.498)FEDLSKPK;IEDSGENLETEPLESQDRELLDT(0.5)S(0.5)FEDLSKPK 162.86 2.2324e-51 34948000.0 1834.3600000000001 2028.19 2178.35 1914.1 2416.2 2172.7799999999997 2068.84 2002.92 2596.7 3022.6 3066.1 True False 2143.9551222038226 2131.4162079000857 2487.2727856034635 2383.0545859272147 2060.7801807207857 2402.7021374253645 2444.7214485012823 2286.8400436852457 2008.5515960778177 2339.7925607131297 2304.7027499449136 0.9302523382918109 0.9248117606277123 1.0792163048631385 1.0339965038806735 0.8941631109565179 1.0425214867656114 1.0607534739825843 0.9922494533144914 0.8715013665540277 1.015225308673344 1.0 11.170364975084953 -8.563768218716444 24.995552849302605 0.9389282384210914 0.99731638415843 0.013138161978559548 0.06647848890457968 234.51449017832388 143356.67961802 0.012090462172282742 0.013709303129598078 2.7304346164037293e-09 8.563768218716444 0.05838814573733864 IEDSGENLETEPLESQDRELLDTS(ph)FEDLSKPK ddPTM_A549_PD325901_60min_R1 1 IEDSGENLETEPLESQDRELLDTSFEDLSKPK 32 2 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 IEDSGENLETEPLESQDRELLDT(0.136)S(0.864)FEDLSKPK 326.13 8.201399999999996e-241 39806000.0 4419.4 4617.3 4450.9 4973.2 5063.9 5204.0 5533.7 5479.4 5392.2 4921.8 4273.9 True False 4868.054234609674 5006.416075415757 4752.964839435984 5280.383269043317 4708.229133506619 5161.620349380703 5744.287981656828 5370.109068493855 5165.584585880608 4611.036708040356 3748.237394484315 1.2987582488166878 1.3356720902424442 1.2680533112524215 1.408764363968413 1.2561181798236611 1.377079359214611 1.532530460880035 1.4327024954172303 1.3781369860622963 1.230188011790738 1.0 11.871996613592831 -10.57054455503229 0.8514732487533813 0.9984575400019589 1.3660052745946356 0.4300715317937609 0.09930419633424922 0.24664422243019782 0.3181111883775496 0.056254439775238196 0.015387413224402166 2.688162045660479e-11 10.57054455503229 0.36754773459267676 IEDVGS(ph)DEEDDS(ph)GKDK ddPTM_A549_PD325901_60min_R1 2 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 2 IEDVGS(1)DEEDDS(1)GKDK;IEDVGS(1)DEEDDS(1)GKDK 133.21 9.725100000000001e-11 60991000.0 12294.2 14325.2 12002.8 13061.5 15785.5 12712.400000000001 12296.8 12999.6 14028.0 15320.800000000001 17356.1 True False 13542.298133488315 15532.434878293767 12817.382186699815 13868.279190181236 14676.780937018639 12608.87442918279 12764.761453067154 12740.312780011089 13438.451943684055 14353.442073335907 15221.409729382813 0.8896875108319825 1.0204333996942847 0.8420627533570457 0.9111034678614855 0.9642195563980619 0.8283644322932266 0.8386057323210057 0.8369995293811511 0.8828651342157221 0.9429771833569781 1.0 13.893814359639668 -10.599083166524405 0.9677776623541816 0.9976716752352065 0.8914042241058585 0.20402233342260934 0.05827253023048224 0.49661517546795775 0.8558416174944553 0.03452908633037947 0.010316868640695694 2.517194843824754e-11 10.599083166524405 -0.10626745112934799 IEDVGS(ph)DEEDDS(ph)GKDKK ddPTM_A549_MK2206_60min_R1 3 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 2 IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK 142.42 1.0546e-16 74817000.0 13843.1 15060.5 12468.2 11139.0 18281.0 13744.0 12559.400000000001 12595.5 21168.3 20710.8 21855.8 True False 16179.476848699123 15827.015121403445 14236.378242918314 13868.055500048706 15591.889116694258 15198.380957471163 14841.280408493165 14380.950697100989 16373.713848828918 16032.215895724708 16428.401670606316 0.9848478977506029 0.96339348396388 0.866571108277078 0.8441512313922431 0.9490813183969841 0.9251284003278356 0.9033916205644749 0.8753712616383963 0.9966711416683192 0.9758840949457388 1.0 14.003904505969047 -8.778938020842569 24.662148019039233 0.9984280571196071 0.9129175418403817 0.41288512654802034 0.04053031902040572 128.44490147148593 181026.2537394023 0.007142676563855889 0.007612808654695728 1.6636500567287e-09 8.778938020842569 -0.08551051527922549 IEDVGS(ph)DEEDDS(ph)GKDKK ddPTM_A549_PD325901_60min_R1 4 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 2 IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK 164.65 3.2479999999999996e-23 506610000.0 26528.300000000003 27149.6 27815.2 28201.0 34966.600000000006 26670.3 28982.0 30589.9 30915.5 29001.6 32450.000000000004 True False 29221.433486897724 29437.59207352949 29702.90673838542 29942.91172088203 32510.666644221354 26453.10591930978 30084.925869558934 29979.76044718768 29616.229046547236 27170.434026555973 28458.855717498314 1.0267957987126843 1.0343912758034535 1.0437140211551859 1.0521474235687989 1.1423743444551682 0.9295210665495847 1.0571375802387166 1.0534422305937696 1.0406683016540716 0.9547268623962931 1.0 14.796590034250139 -7.256434005822123 24.999899859080116 1.0200606645989496 1.057140065848223 0.21357571276109233 0.047377026878992465 629.1768305105326 3142487.0434729406 0.006271070452769468 0.01067623687281052 5.540717327366444e-08 7.256434005822123 0.03707940124927345 IEDVGS(ph)DEEDDS(ph)GKDKKK ddPTM_A549_MK2206_60min_R1 2 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 2 IEDVGS(1)DEEDDS(1)GKDKKK;IEDVGS(1)DEEDDS(1)GKDKKK 59.81399999999999 0.0011862 7508500.0 3259.9 3959.7 3018.2 3211.7 4872.5 3371.3 2614.7 3114.5 5352.5 4375.3 4942.3 True False 3810.0914230970125 4161.23181675384 3446.2261443332663 3998.5666441786925 4155.761704561722 3728.048728312179 3089.7571447749956 3555.989912756223 4140.167296186127 3386.9166912221785 3714.9905094591654 1.0255992346133052 1.1201190975208275 0.9276540910558002 1.0763329365169254 1.1186466544073956 1.003515007324989 0.8316998756545431 0.9572002683995847 1.1144489563686286 0.9116891907525362 1.0 11.859142809834118 -13.156180200005986 0.09213555981499767 1.038440590599971 1.0314268865234535 0.0 0.09442721835234646 7422.371008261632 74.8753829355525 6.800773205093399 1.0805861505464935 6.9794274950187e-14 13.156180200005986 -0.0070137040765174685 IEDVGS(ph)DEEDDS(ph)GKDKKK ddPTM_A549_PD325901_60min_R1 1 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 2 IEDVGS(1)DEEDDS(1)GKDKKK 79.783 0.00010228 10583000.0 1181.1 1562.4 1432.5 1677.4 2064.7 2019.7 1683.0 1931.0 1823.3 2135.8 1953.2 True False 1301.004402520135 1694.0689312432764 1529.7180643222819 1781.0091883481994 1919.6825948283163 2003.2522328293999 1747.0474859729381 1892.4846901598055 1746.673041696546 2000.9452235020922 1712.9687823549352 0.7595026925893859 0.9889666108884507 0.8930215658800704 1.0397207507189503 1.1206757616383396 1.1694621953795283 1.0198945269575506 1.1047981198805488 1.0196759332036835 1.168115405320613 1.0 10.742283144226375 -6.259722440065309 11.611701057289752 1.0380873877548067 0.8913143725134235 0.4932604793811699 0.08228234866601658 0.09850206269031564 513.8809018521135 0.010549748005754929 0.026252181977227715 5.498922006355167e-07 6.259722440065309 -0.1467730152413832 IEDVGS(ph)DEEDDSGK ddPTM_A549_MK2206_60min_R1 7 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(0.905)DEEDDS(0.095)GK;IEDVGS(0.994)DEEDDS(0.006)GK;IEDVGS(1)DEEDDSGK 353.96 7.824299999999996e-204 3023176000.0 103380.7 96784.4 89789.4 83135.1 117501.6 109488.4 96303.2 121399.9 125387.7 111840.3 116391.9 True False 120828.8347445524 101710.31256040369 102522.88707308921 103503.20323207621 100217.27029342852 121074.38981548222 113800.24487118796 138608.70759660102 96987.58615301219 86575.49855353805 87488.57897697836 1.3810812354872875 1.1625553157877626 1.1718430939433473 1.1830481697423834 1.1454897480938577 1.383887945503625 1.3007440079822672 1.584306308519131 1.1085742537724084 0.9895634329175632 1.0 16.41680707502344 -8.978876142699402 21.41630173421334 1.0478991238513544 1.2806036804177814 0.45794725294413297 0.12527744151271272 21.240087995514557 21535.148774821446 0.022852897129695116 0.023437330856468035 1.0498417924154045e-09 8.978876142699402 0.23270455656642697 IEDVGS(ph)DEEDDSGK ddPTM_A549_PD325901_60min_R1 9 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(0.999)DEEDDS(0.001)GK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK 330.25 4.538399999999998e-179 3935415220.0 104965.19999999998 100842.70999999999 104706.37999999999 98235.33000000002 119136.11000000002 93818.67 93255.11 92972.69 106320.38 102459.44 108751.09999999999 True False 115621.18983270397 109341.07907922161 111812.38459741238 104303.10322547829 110768.40063086733 93054.641857001 96803.98424220442 91118.27676228578 101852.1041676809 95990.13347256267 95375.40413002236 1.2122747042317237 1.146428474684734 1.1723398251081798 1.0936058848388739 1.1613937748547851 0.9756670779621806 1.0149784960306383 0.9553645155523224 1.0679074452867225 1.0064453655336785 1.0 16.541329644578074 -7.2510160599569975 24.825185700336476 1.0214730686452742 1.1539167954186924 0.7876916398221008 0.03913639075234536 278.2491525174484 662704.6835979328 0.006290417878849627 0.01081721903271327 5.610272291886898e-08 7.2510160599569975 0.1324437267734182 IEDVGS(ph)DEEDDSGKDK ddPTM_A549_MK2206_60min_R1 11 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.998)DEEDDS(0.002)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.952)DEEDDS(0.048)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.957)DEEDDS(0.043)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK 334.04 8.379899999999997e-187 28724576700.0 259596.9 264819.13999999996 247648.82 227221.33 343258.5 283785.3 251894.68 289595.3 364014.3 346375.00000000006 351037.39999999997 True False 303410.5101851515 278297.3030919995 282769.14654339815 282890.5660503534 292765.6293617855 313815.2720845633 297660.6827784494 330646.3206234107 281565.642261389 268128.6469321151 263865.1254406291 1.149869690731147 1.054695282778541 1.071642741992528 1.0721028994565072 1.1095275621319618 1.189301813039985 1.1280789088038254 1.253088372596657 1.067081683459312 1.0161579575336692 1.0 18.009441159399508 -9.234583378444931 2.3848663781439536 1.0231520457039787 1.124183472470661 0.3913763818598185 0.05591804461851456 0.20969631213762227 2.4590744990790596 0.011938195135732408 0.011043289977758428 5.8266190115063e-10 9.234583378444931 0.10103142676668231 IEDVGS(ph)DEEDDSGKDK ddPTM_A549_PD325901_60min_R1 12 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.504)DEEDDS(0.496)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(0.998)DEEDDS(0.002)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK 342.97 8.507399999999995e-211 42039540300.0 318529.31000000006 380117.36 329826.30000000005 400660.39999999997 419873.98 336993.11 341664.51999999996 344775.45 411387.88 390961.58 391688.84 True False 350866.1710623163 412151.1839491913 352210.29612466315 425408.2829422104 390383.4801313957 334248.7498418699 354666.75027459936 337898.6331786411 394098.6780434891 366276.19911687926 343513.5958001315 1.021404029861056 1.1998103975744692 1.0253169028267275 1.238403044721782 1.1364425888940208 0.9730291724358643 1.0324678691348135 0.9836543220118793 1.1472578752684648 1.0662640535776402 1.0 18.39000767451443 IEDVGS(ph)DEEDDSGKDKK ddPTM_A549_MK2206_60min_R1 17 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(0.859)DEEDDS(0.141)GKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK 277.71 8.045799999999998e-116 43830943800.0 277559.33 327914.3 265897.15 299463.0199999999 377456.9 293930.30999999994 259165.47999999998 284512.18 477241.39999999997 402732.8 410825.13999999996 True False 324404.5592299016 344603.7372347818 303605.3641354792 372831.473343406 321933.4900241314 325033.8203090517 306252.4930236897 324842.65279700863 369146.98489791335 311755.1807699232 308805.91954094876 1.0505127612584007 1.1159233532409216 0.9831591459995315 1.2073326634982695 1.0425107475358544 1.052550484758279 0.9917312902516415 1.05193143084789 1.1954012586502998 1.009550533336144 1.0 18.23634088251728 IEDVGS(ph)DEEDDSGKDKK ddPTM_A549_PD325901_60min_R1 18 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(0.999)DEEDDS(0.001)GKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK 284.95 2.6119e-116 104358859000.0 413253.8599999999 472736.65 435761.36 503745.74000000005 513737.72 435279.58000000013 453693.05999999994 459810.89999999997 534686.7 480118.49999999994 502442.31 True False 455207.0876457875 512575.82656491804 465334.746335529 534860.970270217 477654.55484611966 431734.80741696496 470958.59766866744 450639.61088482797 512215.6774220861 449803.7359724638 440645.0911142238 1.0330469959275888 1.163239615965785 1.0560307052527793 1.2138135226192062 1.0839892795317723 0.9797790015662534 1.0687934738539633 1.022681563852968 1.1624222934763384 1.020784629269513 1.0 18.74925760769247 -6.988218006857884 24.988959758297774 1.0658521297694514 1.1197165971352558 0.17422744116998057 0.06556766728992254 424.69552032926345 900749.6444393572 0.010810961738585366 0.020421384861253226 1.027500384682244e-07 6.988218006857884 0.053864467365804414 IEDVGS(ph)DEEDDSGKDKKK ddPTM_A549_MK2206_60min_R1 8 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK 247.31 5.3053999999999994e-76 10269061900.0 46145.53 56494.28 55537.100000000006 52967.009999999995 85654.2 58100.049999999996 53283.91 45754.67000000001 97364.6 94932.0 83538.79999999999 True False 53933.76731410965 59369.59754542018 63413.09588511401 65943.92982777947 73054.58064543281 64248.158727308095 62964.90672889736 52240.53459030017 75311.67355931691 73486.79526686251 62793.810406411394 0.8589026046523033 0.9454689428969325 1.009862205760321 1.0501660816723817 1.163404166312127 1.0231606954807158 1.0027247322845771 0.8319376424553827 1.1993486789842494 1.170287243141393 1.0 15.938334739047537 -5.6083016083615655 1.4393502461753764 1.0682406099774253 0.8394022474994965 0.27595527248408835 0.09728939598132846 0.6878571520891666 1.9677695075753965 0.015550415372230586 0.18713417926730724 2.4643273194544242e-06 5.6083016083615655 -0.22883836247792877 IEDVGS(ph)DEEDDSGKDKKK ddPTM_A549_PD325901_60min_R1 7 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.998)DEEDDS(0.002)GKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK 205.02 1.1790999999999998e-49 17148518000.0 52345.0 65022.4 52342.7 80355.4 74338.29999999999 79114.20000000001 69764.20000000001 76614.3 88893.20000000001 74105.4 75831.9 True False 57659.02586564766 70502.06584413261 55894.9903842247 85318.77055764559 69117.03426121263 78469.92018542932 72419.11480743503 75086.16768374442 85157.32793843008 69426.3723970933 66505.05703802023 0.8669870899093375 1.0601008251722472 0.8404622576636561 1.2828914725818485 1.0392748662962452 1.1799090727877868 1.088926437068294 1.1290294456979184 1.2804639486249376 1.0439262138727736 1.0 16.021176426723905 -6.252473623432217 24.995329811710473 1.1365283003724316 0.9362751365676235 0.45445066210185314 0.10105391703158861 538.8376971927861 1502203.8048305225 0.016086131947331824 0.04190313429471793 5.591474859658915e-07 6.252473623432217 -0.20025316380480807 IEDVGSDEEDDS(ph)GK ddPTM_A549_PD325901_60min_R1 1 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.151)DEEDDS(0.849)GK 211.45 2.7897e-38 77407000.0 8096.4 7499.3 8517.5 7539.3 9232.7 7497.1 9024.8 7525.8 10576.0 10806.0 11284.0 True False 8918.34056774534 8131.292329795643 9095.548769888328 8004.985438007373 8584.227003085878 7436.046103255587 9368.243702560054 7375.692015124112 10131.527499030704 10123.707315836507 9896.139535169514 0.901193898494538 0.8216630637531083 0.9191006995772446 0.8088998148781916 0.8674318882205249 0.7514087768092704 0.9466563875000559 0.7453100260876396 1.0237858371968842 1.022995611557239 1.0 13.272650127061846 -8.78242973696614 24.9808030712339 1.0112322291480313 0.8466718079131235 0.6098775826594842 0.060655566922921546 99.03627499128731 117863.41804799742 0.009247212304377505 0.009849292118051483 1.6503279806993718e-09 8.78242973696614 -0.16456042123490788 IEDVGSDEEDDS(ph)GKDKK ddPTM_A549_MK2206_60min_R1 1 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.245)DEEDDS(0.755)GKDKK 245.82 3.0395e-75 34371000000.0 56958.0 58596.0 57734.0 51147.0 77046.0 60976.0 57983.0 61476.0 81819.0 76185.0 79082.0 True False 66571.1179105983 61578.286116248244 65921.5493396517 63678.01729607605 65712.63546221901 67428.439847407 68517.76055589117 70190.41126235416 63287.12713809486 58974.7555872196 59443.75684783391 1.1199009187963884 1.0359083843552885 1.1089734706438534 1.0712313735331556 1.1054589909320904 1.1343233238103128 1.1526485570433445 1.1807869317888149 1.0646555751867994 0.9921101679051869 1.0 15.859237676692178 -9.452833281706525 1.408984909253556 1.0167020845978414 1.1100419877524035 0.5450984307675635 0.03920932286493616 0.22461012461512814 0.9163433338928217 0.01000299065230442 0.008061323624854034 3.5250616621686233e-10 9.452833281706525 0.09333990315456209 IEDVGSDEEDDS(ph)GKDKKK ddPTM_A549_MK2206_60min_R1 1 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.494)DEEDDS(0.506)GKDKKK 88.507 6.4678e-06 4427100.0 1065.8 1331.4 995.26 1198.8 1779.9 1324.8 1081.9 959.69 1661.5 2147.7 1818.4 True False 1245.6809836917687 1399.1625731308095 1136.4028336124597 1492.5060538161765 1518.0790678192736 1464.989456668932 1278.467225659567 1095.728996427363 1285.1729028702948 1662.5330783575705 1366.8410947130983 0.9113575736857975 1.0236468442035653 0.831408155642988 1.0919382359728185 1.110647809530427 1.0718067098914927 0.9353444453818671 0.8016506093251153 0.9402504123129648 1.2163323774710904 1.0 10.41662981349123 -7.80300234807044 24.99927470922885 0.953116881433035 1.0081846174342903 0.0 0.11959382187270426 321.36559092672303 193293.55035586088 0.014815778563239866 0.02047104656889321 1.573974354543113e-08 7.80300234807044 0.05506773600125536 IEDVGSDEEDDSGKDK ddPTM_A549_PD325901_60min_R1 2 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 242.42 1.7915999999999995e-65 104277000.0 44316.0 44068.0 41213.0 40108.0 47243.0 38281.0 39901.0 38504.0 41586.0 45408.0 46857.0 False True 48814.92769628508 47781.765016659476 44009.96201390169 42585.380068123035 43924.81465950221 37969.25222802512 41419.45438966501 37736.00751419636 39838.285039210525 42540.931130622266 41093.88605099593 1.1878878438439149 1.1627463257518198 1.070961309409556 1.036294791280538 1.0688892893943691 0.92396353513286 1.0079225493122033 0.9182876369338113 0.9694455518218148 1.0352131477132782 1.0 15.326636145231646 -5.899227910286454 0.8021457589433751 0.9788653692290381 1.231820827665159 0.769396738659927 0.039478020774944826 0.36880891237313557 0.2851245380117551 0.0056336041289833565 0.06797890918879484 1.2611655228898365e-06 5.899227910286454 0.2529554584361209 IEDVGSDEEDDSGKDKK ddPTM_A549_MK2206_60min_R1 2 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 225.68 4.484899999999999e-64 309310000.0 50457.0 54230.0 49357.0 46872.0 71514.0 54726.0 48662.0 51553.0 72541.0 70205.0 70650.0 False True 58972.908044788484 56990.07536494202 56356.56477564674 58355.64210416407 60994.385334022925 60517.068995821224 57503.25550886938 58860.79562444102 56110.579324173385 54345.64174050996 53105.65515919511 1.1104826382050101 1.0731451329260993 1.0612158838207788 1.0988592821090533 1.1485478364061177 1.1395597853827222 1.0828085132645773 1.1083715180237153 1.0565838827516656 1.0233494263011678 1.0 15.696577879669409 -9.391172365722204 0.8330238861406349 1.009770194724156 1.103652441519677 0.6389453211345233 0.026162541474574034 0.23374033019552803 0.3476453898111043 0.008892592708736172 0.006385708345128179 4.0628204920335026e-10 9.391172365722204 0.09388224679552093 IEDVGSDEEDDSGKDKK ddPTM_A549_PD325901_60min_R1 2 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 213.36 1.4922999999999997e-55 627520000.0 48635.0 49517.0 53269.0 48569.0 60435.0 50966.0 51285.0 51679.0 55170.0 53804.0 56103.0 False True 53572.389396805294 53689.9713699266 56884.154672519144 51568.996821797846 56190.25408943155 50550.949793723434 53236.6787392288 50648.22180360876 52851.39675884297 50406.806257751894 49202.686666219015 1.0888102464857143 1.0911999934911767 1.1561188733129482 1.0480931086473264 1.1420159730425854 1.0274022257493938 1.081987231721218 1.0293791911648231 1.0741567247613135 1.0244726390593542 1.0 15.586449474264473 -14.99999999909641 0.1008915001581343 0.7225910717730502 1.1434333015402038 0.43624965724998044 0.035420770138877025 62.74868943416269 0.45476538983446596 3.6631658038149855 0.21814733852713897 1.0000000020805931e-15 14.99999999909641 0.4208422297671537 IEDVGSDEEDDSGKDKKK ddPTM_A549_MK2206_60min_R1 2 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 186.75 2.3229999999999997e-40 76006000.0 6113.5 6258.2 7045.9 6801.4 10311.3 6700.7 5870.0 6093.7 11006.2 11442.8 9052.3 False True 7145.309339275316 6576.715649066571 8045.114568404275 8467.743305326452 8794.521429296512 7409.763626435323 6936.503017489277 6957.500636173578 8513.313273289821 8857.863532630256 6804.364079229754 1.0501068514376375 0.9665437611050125 1.1823462816991082 1.2444577048976766 1.2924824901920948 1.0889722448940593 1.019419733676932 1.0225056383169253 1.251154872690692 1.3017915310658914 1.0 12.732244621613805 -11.164857950159256 1.5664601547787727 1.0001297025952791 1.1415061618164752 0.0 0.13650719210161616 0.5786334229609742 2.5519699857642557 0.08351166267729498 0.01777354362069364 6.841353789526482e-12 11.164857950159256 0.14137645922119613 IEDVGSDEEDDSGKDKKK ddPTM_A549_PD325901_60min_R1 2 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 230.93 5.5476999999999985e-65 89562000.0 8363.4 8148.299999999999 8501.8 8784.6 9672.1 11968.8 10603.400000000001 10184.7 9565.0 10290.3 11001.900000000001 False True 9212.446211190329 8834.98583746134 9078.783273476558 9327.204790725882 8992.765062933582 11871.33006104299 11006.91818940312 9981.55816875741 9163.016313183498 9640.568701846414 9648.736046790284 0.954782695527764 0.9156625069457006 0.9409297994525071 0.9666763341327633 0.9320148275716471 1.2303507944952092 1.1407627005264225 1.0344938570557998 0.9496597553035598 0.9991535321409702 1.0 13.236124251036733 IEDVTPIPSDS(ph)TRR ddPTM_A549_MK2206_60min_R1 1 IEDVTPIPSDSTRR 14 1 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 1 IEDVTPIPS(0.01)DS(0.495)T(0.495)RR 59.261 0.0035604 2891900.0 292.28 346.0 295.01 135.35 351.92 359.65 239.38 213.29 394.32 303.23 457.45 True False 341.60971844007355 363.6099221145112 336.846854032124 168.51075607609235 300.15303418560495 397.70792428365166 282.87224741509095 243.52451067323003 305.00714959964773 234.73013239761866 343.8525400222761 0.9934773738124567 1.0574588807485765 0.9796259001323699 0.4900669224812926 0.8729120749439857 1.156623488248441 0.8226556866404575 0.7082236782588651 0.8870289269344591 0.6826476616470883 1.0 8.42564619252642 -10.41042049681969 1.0436469641545856 0.9925742037963824 0.8843861373455773 0.0 0.19320621886495856 1.2144855670859194 2.56944353243526 0.0808239368041375 0.03145468633984392 3.886686422268795e-11 10.41042049681969 -0.10818806645080514 IEDVTPIPSDS(ph)TRR ddPTM_A549_PD325901_60min_R1 2 IEDVTPIPSDSTRR 14 1 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 1 IEDVTPIPS(0.19)DS(0.405)T(0.405)RR;IEDVTPIPS(0.005)DS(0.497)T(0.497)RR 88.385 3.2047e-05 11150100.0 1256.56 1218.73 598.6600000000001 1204.01 1084.15 1088.97 902.26 1230.88 934.78 1457.62 932.0699999999999 True False 1384.1250461694199 1321.436654233307 639.2886676350279 1278.3789631948944 1008.0030441144579 1080.1017893668532 936.5959980356166 1206.3291327933196 895.4944473850144 1365.5856244410145 817.4312988785402 1.6932616209684468 1.6165721278916376 0.7820702100740309 1.56389774278125 1.23313487689714 1.3213364729839423 1.145779467119209 1.4757559864031637 1.0954981153933931 1.6705815232601253 1.0 9.674953673985232 -2.0000000000017835 0.11854917346183481 0.8755167451053448 2.9451167917479713 0.0 0.3076903429523329 71.10866438729032 0.5601110857731566 0.8338901252805644 24.419729687095177 0.009999999999958934 2.0000000000017835 2.0696000466426265 IEDVTPIPSDST(ph)R ddPTM_A549_MK2206_60min_R1 1 IEDVTPIPSDSTR 13 0 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 1 IEDVT(0.001)PIPS(0.291)DS(0.291)T(0.417)R 69.602 0.004611199999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IEDVTPIPSDSTR ddPTM_A549_MK2206_60min_R1 1 IEDVTPIPSDSTR 13 0 P62263;A0A2R8Y811 P62263 RPS14 40S ribosomal protein S14 0 149.49 2.658e-12 5834100.0 2748.5 3866.9 2945.1 3380.5 4460.6 3104.0 3639.4 3972.3 5236.0 4564.1 5229.7 False True 3212.379605626598 4063.7086931346885 3362.759465136805 4208.722651756413 3804.4516489210923 3432.4632197315545 4300.631870843355 4535.385689658547 4050.054360173857 3533.066640094884 3931.0211576226843 0.8171870556833404 1.0337539611697861 0.8554417110210772 1.0706436020053556 0.9678023842593266 0.8731734279973612 1.0940240966406285 1.1537423757854706 1.0302804787301523 0.8987656129104972 1.0 11.940688413347823 -7.765476477301628 24.999994205010083 1.0327747790827737 0.9446203692175857 0.22405063454509255 0.09099667047930038 121.3152535049851 751253.2967414289 0.01242883071155541 0.017511629925141065 1.7160246526722957e-08 7.765476477301628 -0.08815440986518797 IEEAMDGSET(ph)PQLFTVLPEKR ddPTM_A549_MK2206_60min_R1 5 IEEAMDGSETPQLFTVLPEKR 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 IEEAMDGS(0.019)ET(0.981)PQLFTVLPEKR;IEEAMDGS(0.062)ET(0.937)PQLFTVLPEKR;IEEAMDGS(0.003)ET(0.997)PQLFTVLPEKR;IEEAMDGSET(1)PQLFTVLPEKR;IEEAMDGSET(1)PQLFTVLPEKR 239.96 2.8828999999999998e-86 162275000.0 7543.6 8939.37 8534.400000000001 7920.799999999999 12144.7 10592.8 9415.900000000001 8659.6 14727.5 12555.3 13660.2 True False 8816.77525668721 9394.345749863574 9744.706250811023 9861.396355578221 10358.230717986806 11713.723065068432 11126.647148616245 9887.12481891276 11391.744764984809 9719.049009965443 10267.995337659408 0.8586656856329461 0.9149152722545956 0.9490368791920714 0.9604013277460378 1.00878802311065 1.140799414088805 1.083624094355361 0.9629070226249765 1.1094419495112042 0.9465381206708752 1.0 13.325866925497781 -6.385046756078668 1.242507362611315 1.0535332352801163 0.886196121407606 0.4866601390243356 0.05880659934573374 0.2766343359169357 0.7849814513400664 0.008603565574318316 0.034563284601192505 4.120531551284946e-07 6.385046756078668 -0.16733711387251038 IEEAMDGSET(ph)PQLFTVLPEKR ddPTM_A549_PD325901_60min_R1 6 IEEAMDGSETPQLFTVLPEKR 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 IEEAMDGS(0.002)ET(0.998)PQLFTVLPEKR;IEEAMDGS(0.001)ET(0.999)PQLFTVLPEKR;IEEAMDGS(0.004)ET(0.996)PQLFTVLPEKR;IEEAMDGSET(1)PQLFTVLPEKR;IEEAMDGS(0.082)ET(0.918)PQLFTVLPEKR;IEEAMDGSET(1)PQLFTVLPEKR 302.53 1.9509999999999997e-163 270468000.0 27721.600000000002 28873.5 29631.1 30499.800000000003 35204.5 32019.0 33111.799999999996 35151.3 33903.4 34908.5 36172.0 True False 30535.87642443669 31306.771176557068 31642.04463227921 32383.703375928464 32731.857368931782 31758.247879865634 34371.8876684722 34450.17974583859 32478.558000249388 32704.371352478112 31723.073313200242 0.9625762334865093 0.9868769922594496 0.9974457493408333 1.0208249073538953 1.0317996949971355 1.0011088007242588 1.0834980371895355 1.0859660224504029 1.0238149904200733 1.0309332588803601 1.0 14.953244924832562 -5.747233520306007 1.3147070902843425 1.0234023017662524 0.9604939687524539 0.384832409650947 0.028294685312428295 0.6973391277511081 1.769732174169321 0.0047816786901263555 0.046214035741817844 1.7896433034002767e-06 5.747233520306007 -0.0629083330137985 IEEDNLTYQHLLPES(ph)PEPSASHALSDYETSEK ddPTM_A549_PD325901_60min_R1 1 IEEDNLTYQHLLPESPEPSASHALSDYETSEK 32 0 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 IEEDNLTYQHLLPES(0.886)PEPS(0.056)AS(0.056)HALS(0.001)DYETSEK 75.26100000000001 2.1765e-05 1898500.0 541.14 576.25 475.33 804.23 491.28 377.18 378.3 621.78 642.64 336.67 646.39 True False 596.0761344337874 624.8126098495509 507.5887521914908 853.905460561149 456.77418762399145 374.10837113363056 392.69641351370313 609.3781101230264 615.632075640799 315.41259874353835 566.8881278038125 1.0514881247258652 1.1021797409484377 0.8953949241412869 1.5063033051499481 0.8057571947988844 0.6599333321425656 0.6927229452397471 1.0749530290638205 1.0859851273051457 0.5563930223154995 1.0 9.146920245247259 IEEDRCS(ph)NSADITGPSFIR ddPTM_A549_MK2206_60min_R1 2 IEEDRCSNSADITGPSFIR 19 1 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 IEEDRCS(0.972)NS(0.028)ADITGPSFIR;IEEDRCS(0.998)NS(0.002)ADITGPSFIR 110.83 1.5263999999999998e-10 10084200.0 2347.01 2070.19 1875.55 1913.74 3034.3 2268.6800000000003 1939.32 2160.41 2573.3 2986.9 3345.8 True False 2743.127909114675 2175.5538285035823 2141.531192433988 2382.606385911053 2587.9584895129055 2508.750211772097 2291.6693410353164 2466.6547334781408 1990.451658715696 2312.157215507857 2514.945520617623 1.0907305492808506 0.8650500818678997 0.8515219017182004 0.9473789258567836 1.029031630425677 0.9975366031610877 0.9112202718699551 0.9807984758542113 0.7914492152604876 0.9193667204926311 1.0 11.296311433008565 IEEEEEVEQELLSHS(ph)WGR ddPTM_A549_MK2206_60min_R1 2 IEEEEEVEQELLSHSWGR 18 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 IEEEEEVEQELLS(0.049)HS(0.951)WGR;IEEEEEVEQELLS(0.055)HS(0.945)WGR 105.92 1.5357000000000002e-09 9981100.0 361.82 368.45 245.79 315.01 542.39 504.41 352.16999999999996 516.4300000000001 635.37 571.58 546.6 True False 422.88637035030587 387.20253122280803 280.64671791653075 392.1874641413361 462.6051494996886 557.7863313997407 416.15473043768293 589.6355340005449 491.45970947739943 442.45968102044964 410.86413460744575 1.0292608546967639 0.942410151211556 0.6830645322319765 0.9545429525408587 1.1259321769267547 1.3575931419097207 1.012876752640607 1.4351107442461575 1.1961611347433807 1.0769002299098007 1.0 8.68251758919659 -6.6843082659876085 4.211948975331063 1.1373482886191923 0.8814161606899583 0.42331612942343744 0.14910730236733497 0.18883962229272303 6.387951268424127 0.022887425014127244 0.04859772257132532 2.0686724658927927e-07 6.6843082659876085 -0.25593212792923403 IEEEEEVEQELLSHS(ph)WGR ddPTM_A549_PD325901_60min_R1 2 IEEEEEVEQELLSHSWGR 18 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 IEEEEEVEQELLS(0.285)HS(0.715)WGR;IEEEEEVEQELLS(0.16)HS(0.84)WGR 186.63 2.556e-40 60246000.0 1580.0 1699.19 1633.43 1799.4099999999999 1799.1399999999999 2135.76 1820.33 1526.13 2293.7 1633.95 1987.5 True False 1740.4004368654764 1842.3867046078242 1744.2843824125275 1910.555468943384 1672.7746130960522 2118.3670786689713 1889.6036542727973 1495.6901399241754 2197.3037655566104 1530.782118148349 1743.0500998005507 0.9984798698927946 1.0569901030490403 1.0007081165435912 1.0960989986243082 0.9596824631073199 1.2153219686062762 1.084078796409246 0.8580878656874639 1.260608496455746 0.8782203783606158 1.0 10.767398321535355 -7.241151444103059 24.873945262749388 1.1063663719628694 1.0272042247197937 0.0 0.1253668539040496 1596.1120307078381 1956906.2509197248 0.01817983695859422 0.03146631032937905 5.7391629527368966e-08 7.241151444103059 -0.07916214724307569 IEEELGS(ph)K ddPTM_A549_MK2206_60min_R1 2 IEEELGSK 8 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 IEEELGS(1)K;IEEELGS(1)K 112.75 0.0014145 6918300.0 1815.18 1549.84 1100.52 1241.06 2914.5 2388.0 2016.12 1632.99 2856.6000000000004 1932.3 2177.59 True False 2121.5380071098 1628.7202360981316 1256.5902843952174 1545.1197557132996 2485.7809108148044 2640.696574973892 2382.4229069200137 1864.4713333221337 2209.5846610528347 1495.7920879593669 1636.8343045734148 1.2961226442909302 0.9950428284325347 0.7676954722198989 0.943968336560482 1.518651523779396 1.6132949850792013 1.4555064616274103 1.139071516348776 1.3499134609282812 0.9138323187509161 1.0 10.67669257100125 -6.7097914002065755 24.997815042543195 1.243960032937704 0.9836584720920339 0.24466299513901457 0.23224661316925857 133.5710163460137 64648.025529330895 0.03568219369758149 0.07427835254759761 1.950781371683698e-07 6.7097914002065755 -0.26030156084567013 IEEELGS(ph)K ddPTM_A549_PD325901_60min_R1 2 IEEELGSK 8 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 IEEELGS(1)K;IEEELGS(1)K 107.79 0.0018009 7818300.0 4668.1 4296.1 3403.6000000000004 3937.7999999999997 4653.6 3643.3 3991.8 4075.0 4263.6 4465.7 4712.8 True False 5142.002075526408 4658.147424164262 3634.5887635094714 4181.02896260733 4326.7471900484625 3613.630172732266 4143.710133396774 3993.720928224343 4084.415719068392 4183.734939878873 4133.155476900644 1.2440862929701046 1.1270196464172928 0.8793738304359563 1.0115827933341102 1.0468387202537535 0.8743029854376643 1.002553655809736 0.9662643833614359 0.9882076156813725 1.012237493426247 1.0 12.013027919251536 -5.552354570815865 5.304635359814764 0.9839496896892326 1.21970094757501 0.7191926524900834 0.052436931182978166 0.055688728067609564 4.176609378485204 0.006548138930533977 0.028680769190216504 2.803144133975911e-06 5.552354570815865 0.23575125788577744 IEEELGS(ph)KAK ddPTM_A549_MK2206_60min_R1 2 IEEELGSKAK 10 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 IEEELGS(1)KAK;IEEELGS(1)KAK 111.39 4.5126e-05 72020000.0 6935.7 7202.8 7161.9 6075.5 8793.5 5654.0 5816.6 6052.6 9821.7 8989.5 9369.099999999999 True False 8106.276598415277 7569.391754353761 8177.5651126832 7563.9977727395635 7499.987798679014 6252.30252717855 6873.400928710076 6910.57458531011 7597.100632032005 6958.765706521099 7042.493895994549 1.1510519878513148 1.0748169421430223 1.1611746113595112 1.074051022897105 1.0649619168210662 0.8877966554908305 0.9759896181975187 0.981268097263177 1.0787514684752357 0.9881110029046569 1.0 12.781870692822505 -6.703187178636164 2.6602676704939827 1.0182966799369915 1.1220272557792557 0.5263435659480638 0.053518230945808105 0.22481666696443606 3.2345360655215547 0.008746549749007711 0.019511246167706966 1.980673182099331e-07 6.703187178636164 0.1037305758422642 IEEELGS(ph)KAK ddPTM_A549_PD325901_60min_R1 2 IEEELGSKAK 10 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 IEEELGS(1)KAK;IEEELGS(1)KAK 101.6 0.00011736 151669000.0 9516.5 9312.3 10871.599999999999 9400.3 10591.8 10432.3 10772.599999999999 11565.7 9786.3 10189.400000000001 11071.2 True False 10482.608074322972 10097.080202519695 11609.412152241624 9980.935181369718 9847.868507726333 10347.342807618035 11182.557187992914 11335.01304038387 9375.015843774978 9546.03954506612 9709.51258611917 1.0796224816999598 1.0399162793150498 1.1956740412323654 1.0279542966593993 1.014249522865335 1.0656912708894075 1.151711487966927 1.1674131878245397 0.9655495845566551 0.9831636202535282 1.0 13.245183159375724 -8.782762612793269 24.999790490357423 0.9837317344242967 1.0907298289339595 0.43381578969996515 0.05586534252756072 164.6623526477601 193052.5797437914 0.009951602017511791 0.010599092521111568 1.6490635303433868e-09 8.782762612793269 0.1069980945096628 IEEELGSK ddPTM_A549_MK2206_60min_R1 2 IEEELGSK 8 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 135.83 0.0030021 58133000.0 5953.1 6037.5 6483.8 5537.700000000001 8102.9 5948.5 5776.5 5655.1 8743.9 8151.5 7995.299999999999 False True 6957.837740678809 6344.782961752483 7403.300336169913 6894.436748596801 6910.974143846722 6577.966321705274 6826.01527777288 6456.727743017412 6763.420611139075 6310.070488537378 6009.846350945687 1.157739704873478 1.055731310128102 1.2318618320425043 1.1471901852385824 1.1499419020519945 1.0945315300232576 1.1358052900468518 1.0743582058468775 1.1253899378101087 1.0499553765703924 1.0 12.553112391811146 -12.453564368999404 0.24839156507784182 0.8025677797471243 1.1496224264156982 0.4536767988767906 0.045211348962395564 6.670603351188181 0.2539603836960163 0.7452466309881814 0.024802663338437038 3.519132598007527e-13 12.453564368999404 0.3470546466685739 IEEELGSK ddPTM_A549_PD325901_60min_R1 2 IEEELGSK 8 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 140.5 0.0029823000000000002 95285000.0 5426.9 5778.4 6379.9 5566.0 6115.799999999999 6663.3 5945.0 6576.3 6934.6 6657.9 5944.6 False True 5977.834892927373 6265.366047296563 6812.8783794553065 5909.799178696834 5686.247306364611 6609.036294010072 6171.240228228827 6445.130537492451 6643.162877721093 6237.51905775568 5213.451885924203 1.1466174472746027 1.2017692278339467 1.3067883867595276 1.1335674152192137 1.0906875963921154 1.267689131620032 1.1837148137667781 1.236250123434275 1.2742350026585965 1.1964278551407284 1.0 12.348023198370669 -10.876455929798375 1.0987440562275763 0.9987749412553155 1.2092016273756523 0.032878737478901576 0.08381968608312933 0.28459009178660927 0.6042285192793427 0.046185075122274266 0.010879620852325805 1.3290584170043376e-11 10.876455929798375 0.21042668612033677 IEEIKTPDS(ph)FEESQGEEIGK ddPTM_A549_PD325901_60min_R1 2 IEEIKTPDSFEESQGEEIGK 20 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 IEEIKT(0.008)PDS(0.967)FEES(0.026)QGEEIGK;IEEIKT(0.032)PDS(0.963)FEES(0.006)QGEEIGK 71.54 0.00019781 4435700.0 4094.5 3631.1000000000004 3249.9 3698.6000000000004 4026.5 4084.7 3930.3 3947.5 4417.2 3596.8 3949.7000000000003 True False 4510.170625788413 3937.1055403465575 3470.45775723629 3927.054121869947 3743.692530670905 4051.43555747797 4079.869717242686 3868.764015746157 4231.56044522678 3369.6974341662703 3463.9119392111893 1.3020454055813788 1.1366067063596095 1.0018897183704363 1.1337049528932959 1.0807701224423818 1.1696127466798631 1.1778214310412765 1.116877127259523 1.2216131701634427 0.972801125808535 1.0 11.758186538491682 -10.994212644571078 1.2688028702436338 0.9999545687224994 1.1505552535590147 0.4174656074901656 0.07324237050009133 0.40887385425069206 1.1708000623650565 0.05297791091126337 0.012092588311943759 1.0134150635721113e-11 10.994212644571078 0.15060068483651523 IEEIKTPDS(ph)FEESQGEEIGKVER ddPTM_A549_MK2206_60min_R1 1 IEEIKTPDSFEESQGEEIGKVER 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 IEEIKT(0.001)PDS(0.962)FEES(0.037)QGEEIGKVER 88.001 2.5931999999999997e-07 7316400.0 2778.1 2679.0 3141.7 2327.9 4155.1 3009.6 3246.3 3124.7 5165.6 4248.3 4427.3 True False 3246.9753619760763 2815.349657065823 3587.2403013888497 2898.235604503403 3543.8902942276877 3328.0738743892034 3836.110689212174 3567.6357939924155 3995.5998477681565 3288.6060794275118 3327.8792227360864 0.9756890634109332 0.8459891326077404 1.0779358448109557 0.8708956697414509 1.064909528571774 1.0000584912011792 1.152719324368459 1.072044853556677 1.2006444886792165 0.9881987474063781 1.0 11.700387359991586 -7.158395765390286 1.4679752053321748 1.0977813853868248 0.9452939865099517 0.2954734489167158 0.08564934397328602 0.3405125778488234 1.4377353375907274 0.014365873247044171 0.029745911216531713 6.94391241903943e-08 7.158395765390286 -0.15248739887687313 IEEIKTPDS(ph)FEESQGEEIGKVER ddPTM_A549_PD325901_60min_R1 2 IEEIKTPDSFEESQGEEIGKVER 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 IEEIKT(0.001)PDS(0.995)FEES(0.004)QGEEIGKVER;IEEIKTPDS(0.996)FEES(0.004)QGEEIGKVER 140.35 2.37e-24 29119000.0 6433.6 7676.200000000001 7963.200000000001 8340.7 7978.2 8387.6 8864.1 10192.3 9666.2 9334.8 9215.8 True False 7086.734335834006 8323.10031362624 8503.63063861165 8855.886095895921 7417.8387552958175 8319.294166499913 9201.428176121644 9989.006580795323 9259.963229115972 8745.399134913063 8082.315023769518 0.8768198610166048 1.0297916239528637 1.052128086272692 1.0957115714806198 0.9177863933143507 1.0293207010656544 1.1384644311760792 1.2359090868666167 1.145706793398064 1.0820413593374498 1.0 12.980552869092733 -7.5647335113600285 8.748382905602966 1.0902891837158315 1.0020992869390526 0.3379634270384937 0.0795760671959487 0.39799097505580994 76.87969201161559 0.014304603802950453 0.021259613117767768 2.724372505050503e-08 7.5647335113600285 -0.08818989677677891 IEENS(ph)LKEEESIEGEK ddPTM_A549_PD325901_60min_R1 1 IEENSLKEEESIEGEK 16 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 IEENS(1)LKEEESIEGEK 103.31 4.1757999999999997e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IEENSLKEEES(ph)IEGEKEVK ddPTM_A549_PD325901_60min_R1 2 IEENSLKEEESIEGEKEVK 19 2 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 IEENS(0.003)LKEEES(0.997)IEGEKEVK;IEENS(0.002)LKEEES(0.998)IEGEKEVK 72.033 0.00015942 24709000.0 5160.2 5355.8 5219.2 5229.6 6808.299999999999 4754.5 5094.4 5548.0 5294.1 4689.9 6037.6 True False 5684.059705261537 5807.152062181732 5573.406297599198 5552.620514716666 6330.108495359921 4715.780928349452 5288.270179762645 5437.340787678198 5071.60738772867 4393.778913616657 5295.013475499774 1.073474077367677 1.0967209222510277 1.052576414278747 1.0486508750938688 1.1954848698024225 0.8906079182176866 0.9987264818553663 1.0268794995210073 0.9578082116684287 0.8297956056102286 1.0 12.370418640458917 -7.2671474806282195 24.99842157777982 0.9794749077052692 1.0888149824030262 0.5104390434408035 0.06634105617792799 264.9005706295604 1160122.2444622645 0.006955393743660492 0.011296669518627511 5.405707211478089e-08 7.2671474806282195 0.10934007469775697 IEEVLSPEGS(ph)PS(ph)KSPSK ddPTM_A549_PD325901_60min_R1 1 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 2 IEEVLS(0.119)PEGS(0.876)PS(0.584)KS(0.39)PS(0.032)K 57.00899999999999 0.0024690999999999997 5372900.0 2841.3 2995.0 2893.3 2855.9 3445.5 3083.4 2455.9 2640.4 2752.1 2963.0 3662.8 True False 3129.74668434549 3247.399160953413 3089.6567368262895 3032.3024567805073 3203.4999663297185 3058.2898126980103 2549.360618420047 2587.7351506462705 2636.438807685551 2775.915674331256 3212.2988204022436 0.9743012276652343 1.0109268603307502 0.9618210850133186 0.9439664944996626 0.9972608855637461 0.9520564504378991 0.7936249897513633 0.8055711175469767 0.8207327384802316 0.8641523810613785 1.0 11.649390388806296 -7.537925018600997 24.93829213963917 0.8939571743675867 0.976543087024373 0.44516418744364283 0.05898253639376632 301.090450667653 499037.69837585365 0.012591139553189301 0.018679254790930747 2.8978438603036296e-08 7.537925018600997 0.08258591265678628 IEEVLSPEGS(ph)PSKSPSK ddPTM_A549_PD325901_60min_R1 1 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLS(0.004)PEGS(0.761)PS(0.103)KS(0.128)PS(0.004)K 69.922 0.00038434 61501000.0 5731.3 5078.6 7368.2 7533.5 7109.5 8119.5 7938.9 7883.4 8204.4 8191.4 7861.2 True False 6313.1373568399395 5506.591445348254 7868.2503605859965 7998.827185180136 6610.153246443515 8053.377484011643 8241.019183832774 7726.159402592339 7859.59759956954 7674.193606046927 6894.322236252623 0.9157009406440823 0.7987139644260863 1.1412652456556407 1.1602050079875381 0.9587821717536129 1.1681173591893232 1.195334204209193 1.120655394081472 1.1400101895790684 1.1131179168988479 1.0 12.751193015595176 -5.762412897715649 24.999857735797374 1.0892725998539672 0.8572074137988505 0.6229871592887726 0.07457050629165848 13.483186406777566 346297.55859745434 0.011471918894444485 0.03893199613257003 1.7281725487675912e-06 5.762412897715649 -0.23206518605511672 IEEVLSPEGSPSKS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGSPS(0.005)KS(0.969)PS(0.027)K;IEEVLSPEGS(0.12)PS(0.085)KS(0.722)PS(0.073)K 229.07 2.3332999999999997e-64 97051000.0 15577.1 19019.9 19513.2 16381.8 23979.5 19701.8 19287.3 18762.9 28639.3 25042.3 22258.6 True False 18206.133656469374 19987.931669438705 22280.465177789385 20395.341735406942 20452.147315451573 21786.6313990036 22791.552751144987 21422.598533971355 22152.544277564375 19385.2270373673 16731.175313891865 1.0881562899740136 1.1946519771891195 1.3316736427529963 1.2190023326378467 1.222397526279591 1.3021578574288322 1.3622206643320032 1.2804000993393578 1.3240279814156963 1.1586291263873005 1.0 14.030251173399465 -10.800052648177584 1.0117761125912976 0.9977627485913285 1.2644717309223714 0.3450468937458637 0.08583889720385007 0.28669675324378385 0.5139326444127232 0.05529610842253182 0.013358362033008579 1.5847010724037864e-11 10.800052648177584 0.2667089823310429 IEEVLSPEGSPSKS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLS(0.001)PEGS(0.062)PS(0.11)KS(0.795)PS(0.031)K 197.69 1.1668e-48 61857000.0 11353.0 10346.0 12426.0 11731.0 13863.0 10430.0 11622.0 12613.0 12957.0 13159.0 12725.0 True False 12505.548202363127 11217.893729290154 13269.30308360815 12455.597226965963 12889.3107047537 10345.061538055475 12064.281569802431 12361.42382029291 12412.462349181229 12328.138494271016 11159.90567042114 1.120578306993092 1.0051961065426125 1.1890157027740726 1.1161023753076156 1.1549659186561294 0.9269846756388476 1.0810379519406066 1.1076638266805734 1.112237210219432 1.104681245375239 1.0 13.446037212326695 -10.837003743351676 0.9863783225179262 0.9978081505496879 1.090312792018061 0.0 0.07417190276813536 0.7693085407648343 1.276803699219748 0.05176092172001263 0.011564553362398883 1.4554465354727468e-11 10.837003743351676 0.09250464146837323 IEEVLSPEGSPSKS(ph)PSKK ddPTM_A549_MK2206_60min_R1 2 IEEVLSPEGSPSKSPSKK 18 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGS(0.01)PS(0.034)KS(0.944)PS(0.013)KK;IEEVLSPEGS(0.015)PS(0.164)KS(0.807)PS(0.014)KK 146.6 1.5333e-17 49272000.0 9736.9 9512.4 9171.2 8974.400000000001 11763.0 10105.8 10709.5 9721.3 14043.400000000001 12930.1 13043.8 True False 11380.250675650583 9996.54052925455 10471.814066300858 11173.128402876133 10032.678282351872 11175.18904831288 12655.277523986624 11099.324045232654 10862.592322701596 10009.18142965554 9804.664469433956 1.1606976160304636 1.0195698751771431 1.0680441027785033 1.1395727449632125 1.023255646700481 1.1397829148719505 1.2907405004464412 1.1320452708845672 1.1079004647803838 1.0208591493221584 1.0 13.259252544700482 -10.30730922869509 0.9095026294320782 1.0061774317365821 1.1181190080818357 0.26212338456878115 0.07042957108414125 0.5655736722981287 0.905676711612112 0.03623914988675627 0.013925199567839821 4.928227766729719e-11 10.30730922869509 0.11194157634525359 IEEVLSPEGSPSKS(ph)PSKK ddPTM_A549_PD325901_60min_R1 2 IEEVLSPEGSPSKSPSKK 18 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLS(0.003)PEGS(0.006)PS(0.203)KS(0.777)PS(0.011)KK;IEEVLSPEGS(0.002)PS(0.12)KS(0.865)PS(0.013)KK 122.3 4.6305e-11 32448000.0 5657.8 5384.9 5656.3 6221.6 6872.4 6711.9 6606.1 6367.5 6604.3 7391.6 6514.8 True False 6232.175690947778 5838.704421308194 6040.170532095027 6605.894101721208 6389.706332492919 6657.240511723353 6857.4987504966275 6240.495217292881 6326.744238071906 6924.893114541651 5713.520900719812 1.0907767380640236 1.021910048595886 1.057171337438192 1.1561862145089854 1.1183482905764672 1.165173039077296 1.200222922022162 1.0922328500639034 1.1073284491310493 1.2120185144801388 1.0 12.480164350839352 -10.422381871543557 0.7962589994985095 1.0007911597046735 1.1129403159962101 0.0 0.07800821839996594 0.517146855927423 0.5991156906811878 0.03342096254112146 0.010152975911289563 3.7810996953879825e-11 10.422381871543557 0.11214915629153666 IEGVY(ph)AR ddPTM_A549_PD325901_60min_R1 1 IEGVYAR 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 1 IEGVY(1)AR 81.297 0.016367 2441300.0 2239.4 2239.6 2245.6 2259.8 2839.6 2445.2 1810.9 2472.6 2247.3 2268.5 2762.6 True False 2466.742239440851 2428.338951876883 2397.9999198897835 2399.38271362183 2640.1562920881915 2425.287101903477 1879.8147904625027 2423.2820532828237 2152.8537961962647 2125.266522855367 2422.8177135642777 1.0181295215197823 1.0022788500685358 0.9897566401568099 0.9903273779899967 1.089704882586557 1.001019221679524 0.7758795801839555 1.0001916527669195 0.8885744000233261 0.8771879580361931 1.0 11.242470148952092 -7.546800478442368 24.99996091494588 0.9369487743318125 1.0171840230469105 0.36833861946405455 0.06521692001842354 247.03986447067294 258173.62585901178 0.010219173167009125 0.015157937306183903 2.8392231115809396e-08 7.546800478442368 0.08023524871509802 IEGVYAR ddPTM_A549_PD325901_60min_R1 2 IEGVYAR 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 111.73 0.022239 18388400.0 5470.8 5703.4 5666.9 5682.700000000001 6934.400000000001 6242.799999999999 5805.299999999999 5803.4 6233.9 6643.3 6645.700000000001 False True 6026.191588609901 6184.04553408404 6051.489911838001 6033.707472651909 6447.351666381309 6191.960706593741 6026.223868282054 5687.646634320771 5971.910861971202 6223.840904247333 5828.321030563279 1.0339498385571082 1.0610337868582338 1.0382904236236201 1.0352393838657132 1.1062107994003554 1.0623918404843458 1.033955376974087 0.9758636500108999 1.0246365686884695 1.0678617172269642 1.0 12.508864629539802 -7.997716757997237 5.893977060625364 1.0090406420209959 1.0564170583817003 0.28326822125804263 0.028139010390774776 0.10125505852462717 13.568002378510513 0.0035684698714996766 0.004829332498531348 1.0052712031616946e-08 7.997716757997237 0.04737641636070444 IEHAPS(ph)PSSGGTLK ddPTM_A549_MK2206_60min_R1 2 IEHAPSPSSGGTLK 14 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 IEHAPS(0.982)PS(0.017)SGGTLK;IEHAPS(0.962)PS(0.029)S(0.008)GGT(0.002)LK 103.13 8.006000000000001e-06 19778000.0 4643.5 4449.6 4509.8 4261.3 6301.6 4726.2 4757.6 5386.0 6985.9 6441.6 6969.5 True False 5427.209277324759 4676.065634221759 5149.357453354371 5305.318691297027 5374.642987679044 5226.323347002347 5621.9943366281095 6149.4819939332265 5403.604804189941 4986.438086114505 5238.780801585424 1.0359680015018589 0.8925866172538905 0.9829305039439727 1.0127010257217606 1.0259339321951595 0.9976220698947154 1.0731493737868767 1.1738383847005385 1.0314622827041429 0.9518317858623608 1.0 12.355015383416246 -6.285048979044488 2.6550035209831955 1.030908222789011 0.9600604079630473 0.1769754793602999 0.06114049303696115 0.351902619668136 4.8716579976419245 0.008425482582038454 0.024025200386393792 5.187415327806419e-07 6.285048979044488 -0.0708478148259637 IEHAPS(ph)PSSGGTLKNDK ddPTM_A549_MK2206_60min_R1 3 IEHAPSPSSGGTLKNDK 17 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 IEHAPS(0.979)PS(0.016)S(0.002)GGT(0.003)LKNDK;IEHAPS(0.922)PS(0.071)S(0.007)GGT(0.001)LKNDK;IEHAPS(0.718)PS(0.094)S(0.094)GGT(0.094)LKNDK 73.315 0.00024093 15054700.0 3176.6200000000003 3905.7999999999997 3524.7999999999997 3759.0 5016.299999999999 3257.0299999999997 3430.96 3414.8999999999996 5998.099999999999 5380.0 6071.799999999999 True False 3712.7557950975306 4104.588536979355 4024.6696420203775 4679.955168747921 4278.408915052427 3601.6867527584614 4054.321020934417 3898.972532692638 4639.539926997479 4164.654263427726 4564.004486845024 0.8134864472195251 0.8993392861050294 0.8818285901385091 1.025405470620615 0.9374243446482626 0.7891505722967008 0.8883253801831957 0.8542876204286765 1.016550255454431 0.9125000370686842 1.0 12.15608449459409 -8.769401983936337 24.99903293265195 1.0078154083554978 0.8896405581046127 0.2370928914288517 0.06553427077068456 117.62091595403356 369276.33476409747 0.01041672857067783 0.011186129002327775 1.7005837156300253e-09 8.769401983936337 -0.11817485025088503 IEHAPS(ph)PSSGGTLKNDK ddPTM_A549_PD325901_60min_R1 4 IEHAPSPSSGGTLKNDK 17 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 IEHAPS(0.99)PS(0.008)S(0.001)GGTLKNDK;IEHAPS(0.912)PS(0.07)S(0.009)GGT(0.009)LKNDK;IEHAPS(0.828)PS(0.158)S(0.014)GGTLKNDK;IEHAPS(0.923)PS(0.04)S(0.035)GGT(0.002)LKNDK 90.96799999999999 2.3904e-06 29409700.0 7609.400000000001 7692.4 8503.5 8187.8 9994.7 11107.699999999999 9073.5 10111.400000000001 9790.800000000001 9457.5 11190.800000000001 True False 8381.900686255793 8340.665544480144 9080.598645699489 8693.541810157016 9292.706751843163 11017.242573946201 9418.797007709718 9909.720194760159 9379.326724424143 8860.351835972957 9814.40254432604 0.8540408494963951 0.8498393566811765 0.9252319338530921 0.8857942978080696 0.9468438562483376 1.122558660518317 0.959691327635116 1.0097120176193735 0.9556696581440483 0.9027907502220148 1.0 13.260684730389896 -6.872302760195351 4.083611091187273 0.9899429812310175 0.8797951606477141 0.4880935957518556 0.053737776474774436 0.13221174006346037 4.039599550175746 0.006912059132070911 0.013547765263621525 1.3418292041171548e-07 6.872302760195351 -0.11014782058330341 IEIDNKVS(ph)DEEDKTSEGQER ddPTM_A549_MK2206_60min_R1 2 IEIDNKVSDEEDKTSEGQER 20 2 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 IEIDNKVS(1)DEEDKTSEGQER;IEIDNKVS(1)DEEDKTSEGQER 132.24 1.5474000000000003e-17 35578000.0 5847.0 7024.700000000001 6263.3 6319.8 8252.6 6056.6 5329.8 5405.9 10002.9 8933.1 9334.8 True False 6833.830654574759 7382.227225080363 7151.530120536261 7868.151283706605 7038.653472153112 6697.505391954303 6298.15566995134 6172.202879874413 7737.259121348942 6915.106505692602 7016.711532626391 0.9739363835606936 1.0520921646492651 1.019213927675805 1.12134455679433 1.003127097276936 0.9545077292706364 0.8975936434989665 0.8796432418768861 1.102690211129835 0.9855195661869032 1.0 12.77657933696899 IEIDNKVS(ph)DEEDKTSEGQER ddPTM_A549_PD325901_60min_R1 4 IEIDNKVSDEEDKTSEGQER 20 2 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 IEIDNKVS(1)DEEDKTSEGQER;IEIDNKVS(1)DEEDKTSEGQER;IEIDNKVS(1)DEEDKTSEGQER;IEIDNKVS(1)DEEDKTSEGQER 130.57 1.8592e-17 44461000.0 11115.6 13308.9 12314.5 13648.1 15331.7 13102.599999999999 13056.999999999998 13468.0 15189.8 14079.8 15249.6 True False 12244.047529127782 14430.487710588608 13150.236023104178 14491.112139915977 14254.854283493632 12995.896769753188 13553.891280064558 13199.370174558388 14551.425529952383 13190.799025126295 13373.995875179115 0.9155115377186251 1.078995974372195 0.9832690353606125 1.0835289822999068 1.0658635172715514 0.9717287855510974 1.0134511335702827 0.9869428925916737 1.0880387332075125 0.9863020108752376 1.0 13.707142957023562 -8.732995133071233 24.999530527315656 1.0415738902302523 1.0164904484386177 0.0 0.053908567186516515 586.2994722582312 515297.1332349863 0.009058753515846413 0.010270518625125515 1.8492893429555766e-09 8.732995133071233 -0.025083441791634575 IEKIGEGT(ph)YGVVYK ddPTM_A549_PD325901_60min_R1 1 IEKIGEGTYGVVYK 14 1 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;P06493-2 E5RIU6 CDK1;CDC2 Cyclin-dependent kinase 1 1 IEKIGEGT(0.999)Y(0.001)GVVYK 62.203 0.0024506 3358600.0 1701.7 1861.0 2463.8 2937.1 2968.6 4414.9 3367.0 3034.4 3952.8 2866.5 2750.9 True False 1874.4553312746705 2017.8330011800672 2631.0082840329746 3118.517996361925 2760.09577711403 4378.946518155427 3495.133027493095 2973.8765115592496 3786.6775622322766 2685.5087008000487 2412.556739391866 0.776958029906134 0.8363877906924183 1.090547733478871 1.2926195456642444 1.144054244216353 1.815064676679575 1.4487257316792121 1.2326659361009995 1.5695703650836357 1.1131380485074045 1.0 11.236347157271481 -5.923278137703898 1.6579363114175918 1.3191598662844544 0.7579284548898737 0.47097651493583526 0.21475031439103484 0.3461417154679308 1.7160018229788603 0.037416786198938484 0.20621250282795472 1.1932236766296078e-06 5.923278137703898 -0.5612314113945807 IEKS(ph)LVEPK ddPTM_A549_MK2206_60min_R1 1 IEKSLVEPK 9 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 IEKS(1)LVEPK 50.145 0.008016500000000001 3993900.0 967.07 1193.7 1029.9 1300.3 2031.2 1575.8 1178.4 1488.8 2343.5 1712.5 1784.6 True False 1130.2877734085191 1254.4542312950634 1175.9553064902364 1618.873558372685 1732.4131707143706 1742.5501100686174 1392.5000265433334 1699.8419592587788 1812.7009918005033 1325.6450606170959 1341.4345675456427 0.842596277712264 0.9351587186173956 0.8766400799122274 1.2068226043515926 1.2914630445852326 1.2990198346065258 1.0380677971428176 1.2671821648139698 1.351315252831984 0.9882293871720957 1.0 10.389560969242128 -6.260779948242406 24.933801975137953 1.1879834618365959 0.8898343785757673 0.5450616393782204 0.12004382909797212 38.09267471228431 1440282.360198593 0.019795911467132138 0.04916231992509371 5.48554840615212e-07 6.260779948242406 -0.29814908326082856 IEKS(ph)LVEPK ddPTM_A549_PD325901_60min_R1 2 IEKSLVEPK 9 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 IEKS(1)LVEPK;IEKS(1)LVEPK 95.01799999999999 0.00025978 13331300.0 3767.9 4048.1 4154.9 3845.8 4284.0 3905.3 4159.2 3933.7 4290.2 4598.0 4456.299999999999 True False 4150.414434218623 4389.247593808183 4436.876499443381 4083.3463315544905 3983.1066189976823 3873.4965315980885 4317.480632001567 3855.239267572048 4109.897813572383 4307.6814953004105 3908.2033508131776 1.0619750462460067 1.123085776203256 1.1352726818885213 1.0448141933824582 1.0191656527209414 0.9911194950467795 1.1047226166220934 0.9864479714879448 1.051607975495246 1.1022152914341352 1.0 11.932289819925712 -6.408895410463457 4.797594117221213 1.0254965186635967 1.1078783538532766 0.33192972122814113 0.04197658435594526 0.13587400615277725 4.809264908588401 0.00489967690868077 0.011634012446374464 3.900359062741233e-07 6.408895410463457 0.0823818351896799 IELENYRLS(ph)LR ddPTM_A549_MK2206_60min_R1 2 IELENYRLSLR 11 1 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 IELENYRLS(1)LR;IELENYRLS(1)LR 96.59100000000001 7.8485e-05 10439500.0 1022.18 1253.13 1473.65 1061.45 996.4599999999999 864.3 782.13 872.81 865.61 1690.1799999999998 1489.21 True False 1194.6989940983794 1316.9089644490095 1682.6357291089785 1321.505297650301 849.8820540025798 955.7596523240929 924.2328969452968 996.5334903685213 669.5507170951283 1308.36716411901 1119.3980568949037 1.0672691333879505 1.1764438542103433 1.5031612023487326 1.1805499299471915 0.7592313107636315 0.853815715006039 0.8256516895419891 0.8902405040194582 0.5981346072302411 1.1688131456546276 1.0 10.128507433210881 -6.6975252549361235 5.2967812848272695 0.813892165372067 1.2551915822276316 0.49014628165187235 0.17130953740466576 0.10741985513307098 5.828157059804838 0.024255521545883372 0.050804664662444994 2.0066643958008152e-07 6.6975252549361235 0.4412994168555646 IELENYRLS(ph)LR ddPTM_A549_PD325901_60min_R1 4 IELENYRLSLR 11 1 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 IELENYRLS(1)LR;IELENYRLS(1)LR;IELENY(0.003)RLS(0.997)LR;IELENY(0.003)RLS(0.997)LR 105.03 5.1007e-05 24639900.0 1727.44 1534.71 1667.05 1884.91 1550.85 2168.96 1813.4 1934.52 1675.94 2081.99 1950.1299999999999 True False 1902.8084371258851 1664.0453977652128 1780.1860377860114 2001.3366097587952 1441.9236461420526 2151.296708876395 1882.4099293305565 1895.9344809984188 1605.5060700383428 1950.532796085364 1710.2763728926027 1.1125736560972608 0.9729687108702794 1.040876238484877 1.170183159563808 0.8430939402520756 1.2578649526905943 1.10064663183461 1.10855444830347 0.9387407178659312 1.1404781279802245 1.0 10.740013761576794 -8.76235272405557 24.99701215367255 0.9710720034228013 1.073530630390559 0.0 0.11348521136062313 29.769783973272546 814752.2115092637 0.016450319385348116 0.01801274817845366 1.7284120122569353e-09 8.76235272405557 0.10245862696775765 IELGDVT(ph)PHNIK ddPTM_A549_PD325901_60min_R1 2 IELGDVTPHNIK 12 0 F8WCK0;C9JZU6;C9J5J3;A0A0D9SF32;A0A087WWJ2;C9J5D1;E7EQ69;Q9GZZ1-2;Q9GZZ1 F8WCK0 NAA50 N-alpha-acetyltransferase 50 1 IELGDVT(1)PHNIK;IELGDVT(1)PHNIK 95.631 0.00023024 10223800.0 1637.28 1661.23 1796.23 1815.36 2174.5 1391.98 2182.6 1892.28 1746.0 2270.4 2172.68 True False 1803.4954602981682 1801.2276821871926 1918.1329694084552 1927.490664218305 2021.7706216177544 1380.6441763894977 2265.6600373645488 1854.5369909350586 1672.621691878556 2127.0465565311115 1905.4541337532871 0.9464911426368029 0.9453009916534735 1.0066539705315256 1.0115649755481708 1.0610439715152584 0.7245748674464078 1.1890393986559742 0.9732782112587859 0.8778073752863801 1.11629375845502 1.0 10.895919166072167 -8.541586160782082 24.26344188691907 0.9414160775605098 0.984480880437118 0.0 0.11966660281605955 545.7777008731882 707867.7595772219 0.017764103111888575 0.02014458689307421 2.873517452656647e-09 8.541586160782082 0.04306480287660819 IENHEGVR ddPTM_A549_MK2206_60min_R1 2 IENHEGVR 8 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 195.05 9.8131e-15 121864000.0 1897.51 1670.03 1528.6100000000001 1495.04 2064.2799999999997 1517.94 1409.23 1718.1599999999999 2547.5 2319.98 2637.0 False True 2217.763298334555 1755.0273937251359 1745.389883536304 1861.3248671148956 1760.6271465351806 1678.567403272977 1665.2688496314165 1961.7144416443193 1970.4953175215612 1795.894906703913 1982.1601225024428 1.1188618281426566 0.8854115133289253 0.8805493883777561 0.9390386003553564 0.8882365892380174 0.846837439729044 0.840128317952963 0.9896851517564024 0.9941151046030756 0.9060291781254416 1.0 10.952857795425306 -8.40148271332758 8.722773605759253 0.9969357968189425 0.9091785558730914 0.0879114181758529 0.07605101529925604 0.32252188426521294 21.816243727986866 0.011157496825520571 0.013487872022854317 3.96750320880711e-09 8.40148271332758 -0.08775724094585113 IENHEGVR ddPTM_A549_PD325901_60min_R1 2 IENHEGVR 8 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 182.29 1.9388e-09 151513000.0 2696.21 3127.5 3132.4 2753.34 3175.0699999999997 3022.5 2739.7799999999997 3288.4700000000003 3428.02 2998.01 3704.6 False True 2969.927254355103 3391.0654009622053 3344.983500651389 2923.4075585111673 2952.0640365968625 2997.88576210668 2844.0438271651424 3222.8788860951936 3283.952240660666 2808.715136956414 3248.9576853942744 0.914116939012916 1.0437394787278325 1.029555883626555 0.8997985943779381 0.9086188009982091 0.9227223166321029 0.875371150554091 0.9919731797627533 1.010771009860704 0.8644972969586597 1.0 11.665761238711331 -8.49953070814528 24.10394933250859 1.0048908313487412 0.9447695991138394 0.0 0.06489409323971888 548.1102252475075 565856.5853382592 0.008545632322923264 0.010292723982133583 3.1656966150699855e-09 8.49953070814528 -0.060121232234901845 IEPEPFENCLLRPGS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 IEPEPFENCLLRPGSPAR 18 1 A0A2R8Y5T7;A0A2R8Y430;P48637-2;P48637 A0A2R8Y5T7 GSS Glutathione synthetase 1 IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR 107.45 1.1525000000000001e-09 5693700.0 1091.45 1411.73 1254.35 1347.18 1224.1999999999998 1229.69 994.6 1012.64 1677.0900000000001 1648.4899999999998 2083.0699999999997 True False 1275.660076609477 1483.5810270136383 1432.2356915195926 1677.2391604772076 1044.1218016879336 1359.8149795978409 1175.3059456890692 1156.1848210799362 1297.2317927624088 1276.0949640739718 1565.7862291927047 0.8147089639862191 0.9474990898205496 0.9147070429007613 1.071180170834665 0.6668354735922456 0.8684550638173262 0.7506171173155858 0.7384052813365509 0.8284858868833209 0.8149867078163708 1.0 10.61267154509732 -4.308941528579055 22.93362070001443 0.8851127913871946 0.8696576644360585 0.0 0.11801526495112236 0.0 0.0 0.0162704465285773 0.0 4.9097397419125564e-05 4.308941528579055 -0.015455126951136045 IEPEPFENCLLRPGS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 IEPEPFENCLLRPGSPAR 18 1 A0A2R8Y5T7;A0A2R8Y430;P48637-2;P48637 A0A2R8Y5T7 GSS Glutathione synthetase 1 IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR 85.35 1.9215e-05 16408000.0 2083.5 2245.1 2808.6000000000004 2424.3999999999996 2441.25 2459.3 2291.66 2647.7 2134.7 2446.9 3145.1000000000004 True False 2295.015386208365 2434.3024561791344 2999.2084854838117 2574.1496817881084 2269.7850218552962 2439.272276178318 2378.8703753444684 2594.8895464195307 2044.985982619216 2292.4023164094338 2758.2726384315533 0.8320480558127089 0.8825459899291757 1.0873502654143945 0.933247006087062 0.8229008946504912 0.8843477770077762 0.8624493250591697 0.9407661556962956 0.7414009601973444 0.8311006984838782 1.0 11.429549350169955 -6.590934149806563 11.79922363375586 0.8762777744550982 0.94239390064456 0.11268950117549836 0.08505322552829947 1.3525857098137668 229.96041500115598 0.01529873699736693 0.03185432229373365 2.564872907618328e-07 6.590934149806563 0.06611612618946172 IEPGAEALRTS(ph)GLAR ddPTM_A549_PD325901_60min_R1 1 IEPGAEALRTSGLAR 15 1 A0A494BYR6;Q86Y91-6;Q86Y91 A0A494BYR6 KIF18B Kinesin-like protein KIF18B 1 IEPGAEALRT(0.245)S(0.755)GLAR 40.186 0.029989 2411600.0 604.72 540.04 669.47 592.81 691.4 444.2 527.52 674.83 737.73 811.49 660.14 True False 666.1107292286649 585.551066070545 714.904260050149 629.4265273308066 642.8384492005124 440.5825824740404 547.5950622700202 661.3699862561066 706.725773625181 760.25238291025 578.9469649722442 1.1505556977237104 1.0114070916644624 1.234835491510734 1.087192032107781 1.1103580951172811 0.7610068091386621 0.9458466757767232 1.1423671359738692 1.2207090051142468 1.3131641219445687 1.0 9.177287384490148 -11.357894774888821 2.0300476079102947 0.999343341480445 1.0963105145422274 0.0 0.15895195027619582 0.8894762569556051 6.630559787207488 0.11043925502496502 0.020929532084855162 4.386369621508095e-12 11.357894774888821 0.09696717306178237 IEPGTS(ph)TPR ddPTM_A549_MK2206_60min_R1 1 IEPGTSTPR 9 0 Q86X27;Q86X27-3;H7C2H2;A0A0A0MR31 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 IEPGT(0.105)S(0.589)T(0.306)PR 56.916000000000004 0.014578 11553000.0 2385.1 2487.8 2082.6 2372.0 3019.1 2532.4 2108.0 2500.3 4078.8 3366.8 3181.9 True False 2787.646569903583 2614.4183937470534 2377.9439958215034 2953.140106483126 2574.994389377588 2800.3768871289294 2490.99631360603 2854.725181847613 3154.95831250518 2606.2375416558484 2391.7464140275024 1.1655276468918867 1.0931001624643768 0.9942291464826504 1.2347212435077026 1.0766168078168084 1.1708502501372322 1.0414968321877398 1.1935735181224723 1.3191023488115081 1.0896797111810699 1.0 11.223848719926018 -8.295239812309891 24.49344534712411 1.1581140656862208 1.1115054823790016 0.03683045728662704 0.09472024496365407 1733.1398881108516 1255913.0698797756 0.020821313242909544 0.02517251272813974 5.06710831242317e-09 8.295239812309891 -0.046608583307219176 IEPGTST(ph)PR ddPTM_A549_MK2206_60min_R1 1 IEPGTSTPR 9 0 Q86X27;Q86X27-3;H7C2H2;A0A0A0MR31 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 IEPGT(0.111)S(0.149)T(0.74)PR 46.818999999999996 0.037845 8720600.0 1681.4 2107.4 1539.7 1724.9 2556.1 2363.8 1604.8 1765.7 2986.6 2509.0 2768.7 True False 1965.179213716778 2214.6576585668217 1758.0526122953859 2147.500577433703 2180.101076045194 2613.935747036551 1896.3713871323332 2015.993382229464 2310.139868620175 1942.2151574238217 2081.1553777673544 0.9442731834011381 1.0641481564642652 0.8447483696202489 1.0318790227654808 1.047543638180436 1.2560022067361252 0.911210862673187 0.9686895095704985 1.1100275804964035 0.9332389009356011 1.0 11.02316896447166 -6.4986265449880145 24.251716693724024 1.0508548295459434 0.9583570449912013 0.09533664939032249 0.10115971530243963 741.8997728508236 741884.0061114359 0.013214391432032676 0.030539090068993146 3.1722941841627026e-07 6.4986265449880145 -0.09249778455474211 IEPIPGES(ph)PK ddPTM_A549_MK2206_60min_R1 2 IEPIPGESPK 10 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 IEPIPGES(1)PK;IEPIPGES(1)PK 119.74 5.6342e-05 33394000.0 4123.5 5326.5 5150.700000000001 4467.7 6709.299999999999 4426.8 4571.5 5440.799999999999 7599.900000000001 7070.7 6124.5 True False 4819.445990104159 5597.596098679029 5881.146710495451 5562.286700562677 5722.370857755964 4895.241037727979 5402.082375545528 6212.050061751181 5878.5347845464685 5473.423959185578 4603.617622399014 1.0468823402393428 1.2159124753202324 1.2775054734955804 1.2082425511404846 1.2430161075745363 1.0633465763772525 1.1734428917948276 1.3493844561560238 1.276938109704054 1.1889397443772263 1.0 12.168552292507052 -10.855807168773886 1.1239212626524275 1.0009625807113254 1.2130171144961024 0.049565166188805465 0.10060329896339935 0.3642916757618634 0.8229635527350994 0.05945987736236767 0.01476201694070277 1.3937755162720618e-11 10.855807168773886 0.212054533784777 IEPIPGES(ph)PK ddPTM_A549_PD325901_60min_R1 2 IEPIPGESPK 10 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 IEPIPGES(1)PK;IEPIPGES(1)PK 136.53 5.1988e-07 52109000.0 8289.6 9249.1 9597.3 8637.0 9703.8 8931.4 8949.2 9057.7 9340.4 9492.4 10337.400000000001 True False 9131.154089519021 10028.554116719279 10248.630491253216 9170.487873949804 9022.238564292646 8858.665639596238 9289.766703190146 8877.037067871806 8947.855470115957 8893.048244016883 9065.965334177723 1.0071904924559487 1.1061760934506002 1.1304511007357343 1.0115291131081257 0.995176821411369 0.9771342943701773 1.0246858840468664 0.9791607115908907 0.9869721690180632 0.9809267867472468 1.0 13.146244929417255 -6.417965896375825 5.891100654308254 0.9940686489716272 1.0833159924578135 0.6192460087644164 0.03056184063873055 0.10352209874548195 4.900405360625737 0.003964456151630026 0.009299311453434296 3.8197426476319186e-07 6.417965896375825 0.08924734348618635 IEQLQKENS(ph)PR ddPTM_A549_MK2206_60min_R1 1 IEQLQKENSPR 11 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 IEQLQKENS(1)PR 66.215 0.0014688 44917000.0 2201.9 1962.5 2117.5 2517.2 3327.1 2473.6 2291.3 2000.6 3753.6 4048.5 3628.4 True False 2573.5268887135558 2062.382867484762 2417.793340608869 3133.914113001403 2837.6879973827204 2735.354710157209 2707.5995509323993 2284.1911765805435 2903.4155932674907 3133.9410381946354 2727.368141254404 0.9435935141230727 0.7561805963371729 0.8864932108126953 1.1490616413668364 1.0404491987933748 1.0029283061505339 0.9927517704621598 0.837507464441515 1.064548474168257 1.1490715135923073 1.0 11.413293733619101 -6.021248647968712 22.74992875653012 1.0196406988372573 0.8427495041411391 0.4096452668870849 0.08953216737246793 144.94314192418938 155185.4925189328 0.010952239512901168 0.029382593368042755 9.522508128070356e-07 6.021248647968712 -0.17689119469611814 IEQLQKENS(ph)PR ddPTM_A549_PD325901_60min_R1 2 IEQLQKENSPR 11 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 IEQLQKENS(1)PR;IEQLQKENS(1)PR 119.87 3.6473000000000002e-06 93175000.0 11285.5 12846.9 11256.5 14419.5 14562.599999999999 16973.7 15250.9 14628.9 16122.2 14974.8 15808.400000000001 True False 12431.195652053997 13929.553349199461 12020.433780833342 15310.159765939467 13539.773214242668 16835.471814812296 15831.281345112708 14337.115113349968 15444.640000460733 14029.288572384652 13864.067017704168 0.8966485545821136 1.0047234575115418 0.8670207497903365 1.1043050892922448 0.9766090424225891 1.214324180149569 1.1418930191910095 1.0341204420781958 1.1140050016159184 1.0119172501452496 1.0 13.759062913040419 -6.268650338879466 24.982808101157847 1.0684427157656498 0.9309901731887924 0.4609487563791991 0.07276199995271794 407.4689001583067 1411702.222803093 0.010531351264961767 0.024942232821307052 5.387033312039623e-07 6.268650338879466 -0.13745254257685735 IERDIDNNLITS(ph)TPR ddPTM_A549_MK2206_60min_R1 1 IERDIDNNLITSTPR 15 1 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 IERDIDNNLIT(0.043)S(0.479)T(0.479)PR 57.678999999999995 0.002764 1267900.0 333.31 487.96 217.38 391.01 538.29 271.13 292.35 399.31 541.47 512.7 392.17 True False 389.5645793528839 512.7950797543259 248.20775271856257 486.80746755310605 459.1082540684509 299.820796638472 345.46621076030505 455.9134153355879 418.8279095499117 396.88071391438547 294.7833656586209 1.3215283653556833 1.7395658625737294 0.8420005388160334 1.6514075224884368 1.557442880274762 1.0170885862863945 1.1719325138596128 1.5466049596013045 1.420798994590973 1.3463470471871883 1.0 8.203511306613056 -10.748319137885296 0.9094607755544353 0.9908667669080027 1.3647827756248552 0.00945765874193849 0.2763689164885337 0.7493575716293819 1.0586234329710282 0.19038384592191387 0.04434429272636238 1.785175270731534e-11 10.748319137885296 0.3739160087168525 IES(ph)DEEEDFENVGK ddPTM_A549_MK2206_60min_R1 2 IESDEEEDFENVGK 14 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK 290.71 1.6916e-116 126282000.0 11832.3 13638.1 10149.400000000001 11265.1 16890.2 14259.5 13506.5 14318.900000000001 19827.9 16964.6 18356.3 True False 13829.30296803915 14332.22103696507 11588.737535384022 14025.050005709552 14405.673954312653 15768.43082530997 15960.456219032194 16348.64792479214 15336.912308649966 13132.285077573599 13797.924101892908 1.0022741729780886 1.0387229942074303 0.8398899319785494 1.0164608749939048 1.0440464701741887 1.1428118250880024 1.1567288021857298 1.1848628680708067 1.111537662868136 0.9517580311789082 1.0 13.75216360936567 -6.704417668060604 3.152734650971219 1.0791061730839548 0.9641459509602766 0.32245740068869666 0.07907098289795471 0.24960349808657697 5.035344717850324 0.011875928469752706 0.02575789204047521 1.9750692702376467e-07 6.704417668060604 -0.11496022212367829 IES(ph)DEEEDFENVGK ddPTM_A549_PD325901_60min_R1 2 IESDEEEDFENVGK 14 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK 320.4 1.1313999999999996e-156 304500000.0 31730.9 32545.9 30093.6 30517.7 36783.1 29571.2 32489.8 32397.0 33357.3 34896.6 38004.2 True False 34952.19760894603 35288.657212845996 32135.932663517644 32402.7090182746 34199.58195080615 29330.3819515001 33726.21711810074 31750.816420045143 31955.40868413548 32693.222720508995 33329.924328473004 1.0486731762270205 1.0587679967427857 0.9641765863856054 0.9721806956097315 1.0260923971432547 0.8800014564222642 1.0118899996808333 0.9526219173837468 0.9587603130810799 0.9808969980942894 1.0 15.024530421538245 -5.758714985914012 24.99899469419692 0.9753560194198897 1.0537206165479267 0.42621555641587616 0.036453840363032446 46.82489231830532 429637.75723581127 0.004714971814940873 0.01675589058665085 1.7429503427408518e-06 5.758714985914012 0.078364597128037 IES(ph)PKLER ddPTM_A549_MK2206_60min_R1 9 IESPKLER 8 1 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4;Q5TBM3 A0A0A0MSM0 HSPH1 Heat shock protein 105 kDa 1 IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER 134.2 0.00067304 12137011000.0 70771.48000000001 74519.4 75561.09999999999 68412.2 93197.70000000001 69836.29999999999 70992.20000000001 71679.3 102922.2 101886.0 104833.59999999999 True False 82715.97562743707 78312.11916190795 86276.80018374539 85173.1920711402 79488.44178824681 77226.33091241587 83890.56380207876 81840.06028364974 79610.48603298048 78869.88183709992 78800.52385983018 1.0496881438830492 0.9938020120425721 1.0948759723630006 1.080870886374381 1.0087298649135923 0.980023064945425 1.0645939860920557 1.0385725408275999 1.0102786394490353 1.000880171525168 1.0 16.265917600188804 -8.532436448651481 0.4191676443219861 0.9985284443625624 1.0470174860123764 0.17987343744003337 0.03327028818694941 1.1965917497348562 0.5318079996501011 0.01622032006345171 0.018434749311809252 2.9346989140362887e-09 8.532436448651481 0.048489041649814046 IES(ph)PKLER ddPTM_A549_PD325901_60min_R1 13 IESPKLER 8 1 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4;Q5TBM3 A0A0A0MSM0 HSPH1 Heat shock protein 105 kDa 1 IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER 126.66 0.00066971 16159367000.0 160537.3 159751.59999999998 163271.80000000002 168816.0 183897.9 169882.40000000002 169468.6 171210.9 183436.19999999998 175703.0 202813.6 True False 176834.92851468615 173214.42798028892 174352.40618109264 179243.3809110467 170981.54591731422 168498.93405873026 175917.82030977617 167795.96428714742 175727.01443056873 164609.08259433828 177868.81294133767 0.994187376586403 0.973832484267021 0.9802303354809886 1.007727987537435 0.9612789509856631 0.9473214065599141 0.9890312832289213 0.9433692253992141 0.9879585494761506 0.925452190703198 1.0 17.440454048790304 -8.982377509811206 17.129654259060874 0.9946885677255956 0.9744278078237621 0.0 0.027701001262606984 4.229552610672751 4112.104076875875 0.003201559461183311 0.0032655460421048446 1.0414117902388186e-09 8.982377509811206 -0.020260759901833403 IES(ph)YEGR ddPTM_A549_MK2206_60min_R1 2 IESYEGR 7 0 C9JPX5;C9JKL2;O95772-2;O95772;C9JJ39;C9J3F5 C9JPX5 STARD3NL MLN64 N-terminal domain homolog 1 IES(1)YEGR;IES(1)YEGR 120.87 0.0065764 21960000.0 4295.3 5164.1 4224.3 4277.6 4987.9 4084.9 3815.8 4038.3999999999996 6099.3 5332.7 5391.9 True False 5020.241629997426 5426.930632345508 4823.369260323045 5325.6121920287615 4254.186517431176 4517.161406662834 4509.081467484772 4610.855567081307 4717.818288580673 4128.039366279 4052.942421130419 1.2386659143796113 1.3390100496004247 1.1900907437460568 1.3140113129323407 1.04965382563827 1.1145387566110398 1.1125451582969021 1.1376563217484048 1.164047696306727 1.018528993838416 1.0 11.984753964280824 -2.0000000000098006 0.05625764558346518 0.7436429470516609 2.046285872628836 0.6055642273790982 0.06691790111172834 164.90004687033527 0.6767316510016338 3.3124222397217338 17.836312901337926 0.009999999999774334 2.0000000000098006 1.302642925577175 IES(ph)YEGR ddPTM_A549_PD325901_60min_R1 2 IESYEGR 7 0 C9JPX5;C9JKL2;O95772-2;O95772;C9JJ39;C9J3F5 C9JPX5 STARD3NL MLN64 N-terminal domain homolog 1 IES(1)YEGR;IES(1)YEGR 129.29 0.0057356 30858000.0 6359.299999999999 6529.6 6522.0 7418.0 8174.900000000001 6096.5 6709.9 6601.7 7289.2 7536.0 6138.4 True False 7004.891454530769 7079.872307633197 6964.622139972019 7876.193012499669 7600.723225873978 6046.852125288131 6965.24891629817 6470.023914566537 6982.860272875811 7060.1756738981985 5383.415714523621 1.3011983146002746 1.3151264333038222 1.2937180610411616 1.463047520415509 1.4118774452748288 1.1232370758540273 1.2938344882983879 1.2018436356515094 1.297105897662173 1.3114676718818015 1.0 12.394306121151576 -13.985331270541202 0.21352712463240842 0.04158989256139263 1.3532601394838488 0.0 0.12507281163624134 13.443030011403918 0.23872182025985864 5.496328604312284 0.06425040098946072 1.0343528834388298e-14 13.985331270541202 1.3116702469224562 IESDVQEPT(ph)EPEDDLDIMLGNK ddPTM_A549_MK2206_60min_R1 2 IESDVQEPTEPEDDLDIMLGNK 22 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IES(0.002)DVQEPT(0.998)EPEDDLDIMLGNK;IES(0.004)DVQEPT(0.996)EPEDDLDIMLGNK 56.081 0.0013997999999999999 6594400.0 744.66 634.91 696.81 595.0899999999999 762.85 759.3499999999999 891.56 826.04 1259.43 1219.42 1158.69 True False 870.340402810952 667.224207080128 795.6281358534442 740.887076714605 650.6357755412844 839.7039129842649 1053.5449114604335 943.1336996414036 974.1711158964403 943.9521750760291 870.9552947828423 0.9992940028316337 0.7660831859877365 0.9135120259551558 0.850660282051942 0.7470369368424463 0.964118271068816 1.2096429263032573 1.0828726862227271 1.1185087475004478 1.0838124307073502 1.0 9.766454858483684 -7.522295702343841 24.99991596533987 1.0710290985745459 0.8535584917942404 0.6718293371259241 0.08014609565924753 10.73633408554636 460361.3881131241 0.01256693774016689 0.018762332730982923 3.0040302226161165e-08 7.522295702343841 -0.2174706067803055 IESDVQEPT(ph)EPEDDLDIMLGNK ddPTM_A549_PD325901_60min_R1 2 IESDVQEPTEPEDDLDIMLGNK 22 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IES(0.002)DVQEPT(0.998)EPEDDLDIMLGNK;IES(0.058)DVQEPT(0.942)EPEDDLDIMLGNK 99.387 4.0572999999999995e-08 49491000.0 1789.1599999999999 1689.79 1651.5500000000002 1994.16 2071.81 1816.29 2216.1 1947.69 1500.45 1943.74 1763.93 True False 1970.7942060900207 1832.1945336185215 1763.6341145769393 2117.334734134043 1926.293212956486 1801.4987364290303 2300.4348981964513 1908.8417950167534 1437.3913044554283 1821.0119246792556 1546.9777924735515 1.2739641226127782 1.1843702880110003 1.1400513460228563 1.3686910984989094 1.2451977153960467 1.1645278588960934 1.487051016109387 1.233916740307304 0.9291609171435492 1.1771416070346654 1.0 10.595236771094646 -8.728835337854727 7.024182360066482 0.9664965521729872 1.2635919512668687 0.41159017580339063 0.11294805293491092 0.07756495574861326 11.935791922187335 0.015803964850701627 0.017763491465387447 1.8670874602499565e-09 8.728835337854727 0.2970953990938815 IESFGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 IESFGSPK 8 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 IES(0.04)FGS(0.96)PK;IES(0.007)FGS(0.993)PK 79.148 0.0041486000000000006 7027900.0 3805.4 4286.799999999999 4389.2 4052.8999999999996 5021.8 4062.0 3754.3999999999996 3660.8 5485.200000000001 5425.0 6655.0 True False 4447.6584869024755 4504.979809596782 5011.6545599057645 5045.860681941592 4283.099872338235 4491.838143862622 4436.525882259244 4179.729610729808 4242.810958064486 4199.488732173867 5002.379831343859 0.8891085117196386 0.9005673222512066 1.0018540632408182 1.008692033005029 0.8562124462243417 0.8979402395071461 0.8868830500356863 0.8355482293728481 0.8481584967778587 0.839498173621434 1.0 12.28839889036 -5.5381309630942255 24.968952902637437 0.9212248427509218 0.8919731088180604 0.0 0.06443592765634856 801.4735979190281 1312068.3871434226 0.010072580124105772 0.039040039920611974 2.8964700148347298e-06 5.5381309630942255 -0.0292517339328614 IESFGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 IESFGSPK 8 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 IESFGS(1)PK;IESFGS(1)PK 113.62 0.0013464 10106900.0 4530.4 4753.4 4852.0 4866.0 5427.7 5218.200000000001 4857.7 5127.1 5581.0 6057.6 6065.7 True False 4990.322872895792 5153.985700058751 5181.285897446218 5166.561768512182 5046.477076548484 5175.704709288699 5042.562431735437 5024.83596836786 5346.449978450292 5675.122102203521 5319.657353640354 0.9380910350326997 0.9688567058800825 0.9739886524647221 0.971220780785175 0.948647016352486 0.9729394893727233 0.9479111334651479 0.9445788768574086 1.0050365320600214 1.066820985814042 1.0 12.377117607432938 -8.771557733194538 24.99998858567294 1.00237836654699 0.9594088282126187 0.5835229899268088 0.022788352072374025 73.56608536348642 181763.40239818045 0.0020354420789908336 0.0021791655666012905 1.6921632807545376e-09 8.771557733194538 -0.04296953833437134 IET(ph)DEEES(ph)CDNAHGDANQPAR ddPTM_A549_MK2206_60min_R1 1 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 IET(1)DEEES(1)CDNAHGDANQPAR 83.09 0.00013019 4148400.0 173.21 316.99 375.62 216.04 437.64 249.22 266.15 0.0 367.8 316.31 589.81 True False 202.44361342207853 333.12343702623957 428.88856415560974 268.9698096984041 373.2637357382024 275.59229498115286 314.50600989859834 0.0 284.49388725591 244.85535131316414 443.3438990721141 0.45662884691946365 0.7513883414736106 0.9673947584555505 0.6066843600675187 0.8419282108526038 0.6216219407957279 0.7093951457476603 0.0 0.6417002418468701 0.5522921412150438 1.0 8.792282412277856 -10.405390445036662 1.0716832204951239 0.974426865382761 0.6338186903914639 0.0 0.26728319409915247 0.5160832028831964 1.1560011947419864 0.10850112218633537 0.043295324139391765 3.931964199796385e-11 10.405390445036662 -0.34060817499129714 IET(ph)DEEES(ph)CDNAHGDANQPAR ddPTM_A549_PD325901_60min_R1 1 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 IET(1)DEEES(1)CDNAHGDANQPAR 59.358999999999995 0.0038384 3755200.0 228.58 266.32 375.49 380.59 423.05 311.09 317.5 414.19 265.93 453.12 316.91 True False 251.78527332829782 288.76372105012115 400.97300940479846 404.09817991739624 393.33642744327005 308.55658618156093 329.58263624266664 405.9286555242309 254.75388689648568 424.5099258700572 277.9320790580088 0.9059237572779293 1.0389722626795146 1.442701435414762 1.4539458031868806 1.4152250030885227 1.1101870184519445 1.185838775285373 1.4605318569200039 0.9166048329502638 1.5273872929992198 1.0 8.118588550498718 -8.782546594947513 24.991541799218226 0.9606189082885211 1.2562282869507138 0.0 0.2452818750957007 190.12983697945666 225118.11875756975 0.031786816153030216 0.0338560076873189 1.649883977699903e-09 8.782546594947513 0.2956093786621926 IET(ph)DEEESCDNAHGDANQPAR ddPTM_A549_MK2206_60min_R1 1 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IET(1)DEEESCDNAHGDANQPAR 270.96 3.3969999999999987e-112 25835000.0 1757.4 2139.2 1945.8 1919.9 2753.6 2339.8 2221.1 2304.3 3043.3 3529.3 4219.8 True False 2054.0061556951728 2248.0761427380394 2221.7436987753204 2390.275586187587 2348.5490876718627 2587.396082966463 2624.645119615918 2630.9415816227875 2353.997409151471 2732.028678794697 3171.9071994447495 0.6475618694187307 0.7087458747631616 0.7004441047847308 0.7535767712895293 0.7404217525919365 0.8157225039305669 0.8274659233647721 0.8294509946833692 0.7421394325671142 0.8613204948975007 1.0 11.631134847362446 -14.999999999999998 0.17045447159653473 1.9908647284147485 0.6859818057237166 0.612499684788919 0.05737041136846835 17.07584956328437 0.18352192998626754 5.678553524430315 0.0645390967495233 1.000000000000004e-15 14.999999999999998 -1.304882922691032 IET(ph)DEEESCDNAHGDANQPAR ddPTM_A549_PD325901_60min_R1 1 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IET(1)DEEESCDNAHGDANQPAR 222.46 1.2031e-75 12010000.0 1018.7 1110.2 1387.1 1119.1 1232.3 1555.0 1121.6 1601.8 717.91 1277.4 1454.8 True False 1122.117674072697 1203.7604502472384 1481.2369473099031 1188.2242653394949 1145.7474992042116 1542.3365955586069 1164.2831017630692 1569.850842412209 687.7387392992744 1196.7447459975517 1275.8688227370264 0.8794929808422635 0.9434829261404011 1.1609633536873452 0.9313059808064639 0.898013556555387 1.208852013681114 0.9125413843606738 1.2304171200331746 0.5390356179594699 0.9379841600253733 1.0 10.317264292044529 -8.75681741456712 24.999996270033048 0.7823223796234776 1.0183455492737978 0.21003569302381508 0.1625211507417465 124.23084789460334 671958.074445791 0.032978933920637256 0.03679162971543063 1.7505825112034996e-09 8.75681741456712 0.23602316965032022 IETDEEES(ph)CDNAHGDANQPAR ddPTM_A549_PD325901_60min_R1 1 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IET(0.428)DEEES(0.572)CDNAHGDANQPAR 223.53 3.788499999999999e-76 12018000.0 1187.8 1210.0 1443.9 1070.8 1535.1 1250.5 1000.1 1698.6 1346.9 1352.7 1575.7 True False 1308.384581587856 1311.970946495369 1541.8917368760501 1136.940884036754 1427.2798718075019 1240.3163426019541 1038.1593527757186 1664.720090474079 1290.2944769709202 1267.2902911467736 1381.898889185272 0.9468019634629289 0.9493972075401763 1.1157775354932844 0.8227381127045131 1.0328395825319645 0.8975449306086417 0.7512556532900808 1.2046612841953654 0.9337112049721965 0.9170644111986598 1.0 10.432436345100673 -11.11147871649252 1.3066636762362849 1.0011020637183474 0.9590855410768447 0.0 0.12186888790658988 2.368607671927899 6.89799845922798 0.09231584977433373 0.01780737776237604 7.736085901494877e-12 11.11147871649252 -0.042016522641502685 IETELR ddPTM_A549_PD325901_60min_R1 2 IETELR 6 0 P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;B0AZS6 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ; 127.95 0.036680000000000004 21735800.0 5163.5 4781.5 5046.6 5628.799999999999 6100.1 4630.9 5354.0 5523.6 5297.0 5893.4 6335.4 False True 5687.6947188322065 5184.453785675711 5389.092623671081 5976.4781920676905 5671.650020202557 4593.187485770004 5557.749399821213 5413.427464819628 5074.385510813693 5521.289718226061 5556.185963409511 1.023668890186317 0.933095799855898 0.9699266113771515 1.0756440175735713 1.0207811721122078 0.8266799412436207 1.0002813866242055 0.9743063857959354 0.9132857582937767 0.9937193885494006 1.0 12.43987917123821 IETIAASS(ph)TPTPIR ddPTM_A549_MK2206_60min_R1 1 IETIAASSTPTPIR 14 0 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 IETIAAS(0.046)S(0.735)T(0.219)PTPIR 167.98 1.8823e-22 7561800.0 1954.2 2192.3 1817.9 2155.8 2249.4 2204.9 1890.2 2215.7 2993.3 2763.1 3199.4 True False 2284.0211843971238 2303.878705929604 2075.705555557435 2683.9710967775413 1918.5162397621611 2438.2210545058347 2233.6248728548944 2529.7822602966653 2315.3223293178767 2138.9137909437068 2404.900681052072 0.9497361792911685 0.9579932859937178 0.8631148770141212 1.1160423870824405 0.797752794898319 1.0138551973128413 0.9287805065936239 1.0519279570372784 0.9627517458662753 0.8893979729790739 1.0 11.231761598652259 IETIAASST(ph)PTPIR ddPTM_A549_MK2206_60min_R1 1 IETIAASSTPTPIR 14 0 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 IETIAAS(0.002)S(0.026)T(0.97)PT(0.002)PIR 195.94 3.501099999999999e-31 8998800.0 3216.4 3709.3 3085.7 3436.2 4960.6 3587.8 3153.8 3061.5 4983.9 5171.1 4855.1 True False 3759.249686569905 3898.0875262987174 3523.298659323162 4278.069154256881 4230.902311267086 3967.4586146111064 3726.804636551567 3495.4770004505303 3855.0546076528785 4002.9449185150743 3649.4446760567325 1.030088142240813 1.0681316946310435 0.96543418850512 1.1722520914824182 1.1593277023830992 1.0871403642972859 1.0211977348231576 0.9578106563400308 1.0563400598850317 1.096864118745952 1.0 11.83346123521608 -7.764524345306754 24.255984513205988 1.020658105698244 1.0823758339013536 0.15546047507562655 0.06185884848945018 70.39601400378028 553501.9022898652 0.009392294019879866 0.013283177539132392 1.719790931974294e-08 7.764524345306754 0.06171772820310961 IETIAASST(ph)PTPIR ddPTM_A549_PD325901_60min_R1 1 IETIAASSTPTPIR 14 0 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 IETIAAS(0.003)S(0.025)T(0.97)PT(0.002)PIR 135.81 4.8155e-09 9750100.0 4492.2 5335.7 5711.7 5416.8 5893.4 5932.1 5429.4 5445.4 5105.4 5705.7 5899.6 True False 4948.244837017144 5785.358164640778 6099.330309242284 5751.3834335546235 5479.4679151262635 5883.79094438149 5636.018788081682 5336.7872251663375 4890.837792506743 5345.4411282591445 5173.986600645698 0.9563698592492718 1.1181625719554016 1.1788454010455123 1.1115961206464795 1.0590417676076784 1.137187124459737 1.0892990691893798 1.0314652195852851 0.9452745377996112 1.033137798925117 1.0 12.337060602463822 -8.447195957029864 3.0199513446017145 0.974333421711431 1.0984052768873755 0.3657401110183417 0.05683581255185958 0.1556888027975177 2.7802346352694935 0.009263258766624543 0.011131186163226881 3.571116702463892e-09 8.447195957029864 0.12407185517594455 IETIAASST(ph)PTPIRK ddPTM_A549_MK2206_60min_R1 2 IETIAASSTPTPIRK 15 1 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 IETIAAS(0.057)S(0.372)T(0.559)PT(0.012)PIRK;IETIAAS(0.032)S(0.128)T(0.826)PT(0.014)PIRK 127.3 2.17e-09 81562000.0 4464.3 4386.0 4524.7 4654.5 6569.9 4944.1 4589.7 4607.6 7443.7 7103.7 7215.6 True False 5217.764698344122 4609.22866587932 5166.370497403991 5794.852708948445 5603.476413093906 5467.281380372034 5423.589079960914 5260.741410183203 5757.713835146321 5498.969236266081 5423.767379570958 0.962018525720192 0.8498204925307709 0.9525427873001205 1.0684183711077302 1.033133617455615 1.0080228368504474 0.9999671262431507 0.9699423006226622 1.0615709399398652 1.0138652437378448 1.0 12.405079588590606 -6.034093841819227 5.89291696595952 1.0239884019481593 0.9042664533181632 0.608885039238941 0.03596886468339585 0.08222027724089158 8.507259690063174 0.0051594422144944216 0.014500944431597523 9.244983878759711e-07 6.034093841819227 -0.11972194862999608 IETIAASST(ph)PTPIRK ddPTM_A549_PD325901_60min_R1 2 IETIAASSTPTPIRK 15 1 Q96P47;Q96P47-2;Q96P47-4;Q96P47-5;H7C5G0;H7C4U6;E7ESL9;Q96P47-3;Q96P47-6 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 IETIAAS(0.022)S(0.121)T(0.855)PT(0.002)PIRK;IETIAASS(0.028)T(0.969)PT(0.002)PIRK 216.26 6.3502e-46 142958000.0 9434.3 9242.5 9728.0 10139.9 10407.0 9895.0 10324.6 10144.8 10831.7 9942.2 11379.5 True False 10392.063190835417 10021.39791155657 10388.200579216164 10766.218593616257 9676.048222200943 9814.418400676797 10717.508302837901 9942.454005558357 10376.481317251397 9314.447795253538 9979.893640593895 1.0412999942769925 1.004158788906713 1.0409129549198253 1.0787909151480264 0.9695542428270939 0.9834191379310881 1.073910072472487 0.9962484935828123 1.0397386676591778 0.9333213489737395 1.0 13.284808724973582 -6.751294830891487 24.999443124007175 1.016120566699209 1.038611386774096 0.12447312352470241 0.0398401769199696 403.89013901256936 995308.2320707296 0.0045174709686569454 0.009318248017398199 1.772985439913854e-07 6.751294830891487 0.022490820074887008 IETIEVMEDR ddPTM_A549_MK2206_60min_R1 4 IETIEVMEDR 10 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;; 93.551 0.0016530000000000002 4527000.0 2293.9999999999995 2841.9 2110.3100000000004 2157.4500000000003 2930.7 2509.9399999999996 2332.9500000000003 2643.05 3037.71 3317.6600000000003 3414.3 False True 2681.1711170847407 2986.540571263668 2409.5836904936514 2686.0253468516125 2499.5979122748126 2775.5401848366705 2756.8168168060683 3017.710431501151 2349.673535226074 2568.1983017850607 2566.4350801138 1.044706385857948 1.1636922337935156 0.9388835545323073 1.046597814869531 0.9739571951938782 1.081476872858829 1.0741813958854656 1.1758374310280004 0.9155398293269454 1.0006870314721472 1.0 11.32555005162691 -8.793467304316255 24.99999966377677 0.9601160292858413 1.0592263762936842 0.24753691186788884 0.06913581425374289 176.2314884844194 137560.03426343412 0.012124562915729498 0.012908102441821839 1.608913499729037e-09 8.793467304316255 0.09911034700784294 IETIEVMEDR ddPTM_A549_PD325901_60min_R1 3 IETIEVMEDR 10 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;; 155.42 4.4639999999999995e-08 5970500.0 3964.55 3686.17 3769.79 4269.84 4228.16 4073.63 3704.3599999999997 4368.53 4261.62 4327.0 4178.36 False True 4367.028197452547 3996.816482514741 4025.6306189888255 4533.578319289776 3931.188627960138 4040.4557078877237 3845.3314469035718 4281.3962421045135 4082.518931582752 4053.79248154956 3664.4482088063555 1.1917287265672796 1.0907007698757052 1.0985639282101138 1.2371789860188878 1.0727914283282147 1.1026095820314097 1.0493616576876486 1.168360418306777 1.1140883153353605 1.1062490859626661 1.0 11.839380258914392 -14.999999999831825 0.19762595819000112 0.4138559039168233 1.1449636233164713 0.06325054941746333 0.06119018853406794 31.0549011676166 0.3631875835261426 7.006148630695557 0.04442403317198908 1.0000000003872367e-15 14.999999999831825 0.731107719399648 IEVASSVK ddPTM_A549_PD325901_60min_R1 2 IEVASSVK 8 0 P16615-4;P16615-5;P16615-2;P16615;P16615-3;H7C5W9 P16615-4 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 0 ; 91.853 0.0072012 4525400.0 3492.9 3839.3 3616.7000000000003 4261.9 5010.5 4074.3999999999996 4459.0 4285.299999999999 4348.0 4448.4 4717.8 False True 3847.496636662923 4162.851285024522 3862.151010983872 4525.147883522826 4658.579765286618 4041.219437263012 4628.689685058423 4199.826329747184 4165.268680577294 4167.527264831307 4137.5405085982575 0.9298994483963137 1.0061173483072048 0.9334412564560767 1.0936806235779635 1.1259297052453225 0.9767202106819064 1.1187055873989642 1.0150538275140726 1.0067016073731276 1.0072474834193728 1.0 12.014557721359642 -6.233575511802938 24.97176657545301 1.024059080173582 0.9614491507627038 0.298612821367339 0.053464209289019536 908.6846789005634 814367.6487370805 0.007637534959903345 0.020202695377446078 5.840156540891978e-07 6.233575511802938 -0.06260992941087828 IEVDEGFCS(ph)PKPSEIK ddPTM_A549_PD325901_60min_R1 2 IEVDEGFCSPKPSEIK 16 1 Q9UHV7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 IEVDEGFCS(0.995)PKPS(0.005)EIK;IEVDEGFCS(0.981)PKPS(0.019)EIK 100.92 3.5200000000000003e-07 21681000.0 9290.3 10084.3 10680.0 9097.5 10645.8 10163.1 9403.8 10208.0 8909.1 10317.9 10124.4 True False 10233.444416842609 10934.139351853928 11404.809024057222 9659.43191307842 9898.075734016222 10080.335083165062 9761.666754956814 10004.393431978917 8534.681509229798 9666.426033136175 8879.162983859465 1.1525235470330881 1.231438072679823 1.2844464106345241 1.0878764057645216 1.1147532432965737 1.1352798795887729 1.0993904237034011 1.1267270856684233 0.9612033842316144 1.0886641061446665 1.0 13.116207968450299 -7.8865083277095716 0.6016186463039516 0.9779424532561005 1.206013984784888 0.45906714332814225 0.06379133519131173 0.3035958482427915 0.2266447798230762 0.014317190953610547 0.026136997081602796 1.298648661664782e-08 7.8865083277095716 0.22807153152878756 IEVEKPFAIAKE ddPTM_A549_MK2206_60min_R1 2 IEVEKPFAIAKE 12 2 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 122.42 5.2351999999999994e-06 6359600.0 2730.1 2815.3 3475.4 2924.7 4140.4 3253.8999999999996 2917.0 2937.2 4539.4 4868.1 4534.5 False True 3190.874135463405 2958.5867448814547 3968.263979198144 3641.2516312947737 3531.352644754713 3598.2255382359876 3446.981141740413 3353.557094797748 3511.23314793224 3768.3928289577175 3408.4585041666005 0.9361634098120267 0.8680131329939299 1.1642400734370746 1.0682986537297139 1.0360556364227063 1.0556753247362145 1.0113020702838897 0.983892598574476 1.0301528223506329 1.1056003247072312 1.0 11.734903703909609 -5.721561518189428 24.999999849306207 1.0276062521830729 0.9020880767379367 0.4905785906224067 0.05438468962115245 96.78364089496553 60673.738828688554 0.0067264297766715655 0.026050607923414317 1.8986218816189763e-06 5.721561518189428 -0.12551817544513622 IEVEKPFAIAKE ddPTM_A549_PD325901_60min_R1 2 IEVEKPFAIAKE 12 2 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 151.54 1.1100000000000001e-12 12247200.0 7689.6 7383.799999999999 7975.1 8345.6 9275.900000000001 9492.5 7689.799999999999 9512.8 9963.7 9310.5 9688.599999999999 False True 8470.242531215668 8006.058739448353 8516.338244172168 8861.088757767217 8624.392784117781 9415.19622722834 7982.439547020019 9323.059741352763 9544.960338700097 8722.633441060134 8496.963621095654 0.996855218985092 0.9422258463683995 1.002280181949751 1.0428535595665656 1.014997023490339 1.1080659688659797 0.9394461248723942 1.0972225087802114 1.123337790337545 1.0265588779742687 1.0 13.052731672807765 -6.246301480172059 1.4340509285196312 1.0553214210661834 0.9670335110763516 0.2225472761416608 0.05201453972473358 0.4947671123106423 1.8650729398736299 0.008777777107799306 0.036322917621933744 5.671507618817666e-07 6.246301480172059 -0.08828790998983183 IEVKEES(ph)PQSK ddPTM_A549_PD325901_60min_R1 1 IEVKEESPQSK 11 1 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A3B3ITC5;A0A2R8Y6T6 P11171 EPB41 Protein 4.1 1 IEVKEES(0.783)PQS(0.217)K 45.33 0.012936000000000001 9904100.0 3202.6 3598.3 3751.1 3373.2 4350.0 3839.6 3777.5 4247.5 3534.8 4289.9 3467.6 True False 3527.7255943704877 3901.5413692349493 4005.672203196729 3581.5549029069657 4044.471006685317 3808.3315706153207 3921.254829627316 4162.780280400712 3386.2446485981213 4019.0349818810846 3041.107182927491 1.1600135681421653 1.282934515145622 1.3171756081746218 1.1777141308972932 1.329933725910952 1.2522845600427897 1.2894168451677392 1.3688370813663508 1.1134907271957404 1.3215696587228476 1.0 11.570380949288918 -8.981697500741411 3.3179526254453204 1.0456035176767313 1.272601849664599 0.060166684510772894 0.10357105061991749 0.08823305892620885 1.9528234971095064 0.011859428976159716 0.012093726918239206 1.0430436879490392e-09 8.981697500741411 0.22699833198786767 IEVKEESPQS(ph)K ddPTM_A549_PD325901_60min_R1 1 IEVKEESPQSK 11 1 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A3B3ITC5;A0A2R8Y6T6 P11171 EPB41 Protein 4.1 1 IEVKEES(0.408)PQS(0.592)K 66.285 0.0014585999999999998 8896400.0 3887.3 4573.1 4629.4 4473.3 5490.1 3759.5 4736.8 4823.9 4273.3 4775.1 5474.8 True False 4281.935834320991 4958.491186295845 4943.5789228436815 4749.605581398592 5104.494315816799 3728.8838784582535 4917.0615160764155 4727.683530223655 4093.7080618010486 4473.599371076336 4801.434307616631 0.8918034820404505 1.0327104087272572 1.0296046152295708 0.989205574231054 1.0631186409693072 0.7766187433915394 1.0240818057796528 0.9846398445406235 0.8526010769963261 0.9317214574777704 1.0 12.229249723700862 IEVLDS(ph)PASK ddPTM_A549_MK2206_60min_R1 2 IEVLDSPASK 10 0 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IEVLDS(0.796)PAS(0.204)K;IEVLDS(0.982)PAS(0.018)K 130.56 1.2113e-06 67514000.0 4161.0 4802.5 4234.1 4422.8 5024.799999999999 4254.9 4058.3999999999996 4531.4 6514.0 5895.6 5512.6 True False 4863.275073317181 5046.926736863983 4834.559047684544 5506.386198547036 4285.658576312312 4705.150693825967 4795.758747219503 5173.739826830486 5038.589400720495 4563.7798653279715 4143.669279979886 1.1736639062422443 1.2179849297452816 1.1667338103073737 1.3288672011425016 1.0342665610449286 1.1355034332877085 1.1573700561456928 1.2485889865360105 1.2159728637283895 1.1013861283229933 1.0 12.016693145994221 -10.742891782657694 0.9186920979150509 0.9961005622837453 1.1871015688353472 0.29623676668325805 0.07524913874787 0.4024265712851719 0.5839755031575993 0.05233067056555533 0.01240405094319689 1.8076244931164412e-11 10.742891782657694 0.1910010065516019 IEVLDS(ph)PASK ddPTM_A549_PD325901_60min_R1 2 IEVLDSPASK 10 0 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IEVLDS(1)PASK;IEVLDS(0.993)PAS(0.007)K 162.68 6.5266e-09 107711000.0 5746.3 6053.4 6499.7 5812.799999999999 6321.7 5961.4 6637.1 6593.5 5805.2 7195.9 7539.5 True False 6329.660145797523 6563.541262409145 6940.808727871227 6171.843454173366 5877.685600681053 5912.852334895873 6889.67847246048 6461.987469999313 5561.227632126798 6741.549645940024 6612.1892968283 0.9572714666281107 0.9926426736689934 1.0496990355676232 0.9334039267650494 0.8889167168127552 0.8942351873882557 1.0419663084608428 0.9772841006077919 0.8410569302355543 1.0195639210108178 1.0 12.690912312027677 -6.3533368523959854 10.053996654821269 0.9311809755481747 0.9990961765685831 0.06220682981195158 0.062212575103270544 0.6647463419509738 69.09170490980932 0.00993304983099556 0.02310066619706352 4.4326470058365024e-07 6.3533368523959854 0.06791520102040838 IEVLDS(ph)PASKK ddPTM_A549_MK2206_60min_R1 2 IEVLDSPASKK 11 1 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IEVLDS(0.975)PAS(0.025)KK;IEVLDS(0.852)PAS(0.148)KK 105.14 7.566e-05 28946000.0 4837.700000000001 5057.0 5234.7 5109.8 7184.7 5405.4 5084.799999999999 4981.0 6949.3 6781.4 7192.4 True False 5654.185489590612 5314.379699806594 5977.059173593979 6361.70122938764 6127.840147514538 5977.395840185873 6008.642341282705 5687.0720036727425 5375.29464575175 5249.477030113154 5406.328579858384 1.0458456984386104 0.9829923618785674 1.105567130318695 1.1767137597016497 1.1334568472852706 1.1056294030028133 1.1114090186209324 1.0519286646505885 0.9942597025600234 0.9709874182768709 1.0 12.400433481722741 -8.568818439217598 3.162243050785365 0.9972240376807803 1.095510407395428 0.48938202683100074 0.047118598146220415 0.1745025399581795 3.5808532988423614 0.00879378102844871 0.010152830540029367 2.698867482881228e-09 8.568818439217598 0.09828636971464777 IEVLDS(ph)PASKK ddPTM_A549_PD325901_60min_R1 2 IEVLDSPASKK 11 1 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IEVLDS(0.984)PAS(0.016)KK;IEVLDS(0.819)PAS(0.181)KK 116.84 7.735499999999999e-06 69126000.0 8052.799999999999 8986.5 8078.7 7799.5 8608.7 8160.4 9612.0 8857.3 8310.4 8790.3 8691.599999999999 True False 8870.314327841961 9743.823893124498 8626.969163169579 8281.257401050303 8004.054610402741 8093.944407971995 9977.789919888224 8680.634203082564 7961.142788194466 8235.278957838018 7622.588300591934 1.163687972909823 1.2782828494578198 1.131763755691705 1.0864101633833774 1.0500441969010952 1.061836752660964 1.3089766266287 1.1388040204674923 1.0444146363743982 1.0803782958078039 1.0 12.896065242273396 -2.0000000051071702 0.021474182083986257 0.07245192684971505 2.4946464031771 0.1567383082962981 0.08497843112243418 1608.0940668833496 2.587005219962175 104.99729609869789 201.59896401002138 0.00999999988240306 2.0000000051071702 2.422194476327385 IEVLPVDTGAGGYSGNSGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 IEVLPVDTGAGGYSGNSGSPK 21 0 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 IEVLPVDTGAGGYS(0.051)GNS(0.196)GS(0.753)PK;IEVLPVDTGAGGYS(0.001)GNS(0.203)GS(0.796)PK 171.68 4.3265e-35 23847000.0 2101.06 1948.43 1981.31 1866.95 3093.0 1853.6 1681.83 2185.28 2681.2 2709.2 3037.1000000000004 True False 2455.6675620148512 2047.5967645825924 2262.289550735189 2324.3528338105716 2638.0237972723257 2049.746721679901 1987.3967410398639 2495.0501321393226 2073.912480996589 2097.189838378884 2282.9042503041983 1.075676985439767 0.8969262571173315 0.9909699675024644 1.0181560761914785 1.1555560409162178 0.897868021143143 0.8705563278771075 1.092928068186327 0.9084535545983756 0.9186499337847535 1.0 11.15665463589875 IEVLPVDTGAGGYSGNSGS(ph)PK ddPTM_A549_PD325901_60min_R1 4 IEVLPVDTGAGGYSGNSGSPK 21 0 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 IEVLPVDTGAGGYSGNS(0.128)GS(0.871)PK;IEVLPVDTGAGGYS(0.03)GNS(0.198)GS(0.772)PK;IEVLPVDTGAGGYS(0.001)GNS(0.258)GS(0.741)PK;IEVLPVDTGAGGYSGNS(0.008)GS(0.992)PK 283.75 1.4294999999999996e-127 37584700.0 9243.3 7600.5 9093.7 9756.599999999999 10572.2 9567.9 8711.5 10052.8 9431.4 9831.6 10244.5 True False 10181.67301144219 8241.020808957068 9710.853166860414 10359.243023153713 9829.645144110003 9489.982194627131 9043.020899615709 9852.289017730958 9035.031056576976 9210.831098128647 8984.491445236097 1.1332497864240143 0.9172495582180954 1.0808461698752532 1.1530138446118237 1.0940680620628824 1.0562625889814903 1.0065144983148318 1.0965883909828862 1.0056252055721726 1.0251922609389943 1.0 13.13322112894263 -8.819595487516871 10.164416613986383 1.0026020157969209 1.0640278847506588 0.14443673736570284 0.06059785319333731 0.5352986863189751 90.35926315977375 0.010239072545676544 0.01089555675095596 1.5149716730844622e-09 8.819595487516871 0.06142586895373792 IFAPNHVVAK ddPTM_A549_MK2206_60min_R1 1 IFAPNHVVAK 10 0 M0R3D6;M0R1A7;Q02543;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 0 73.985 0.0017706 15763000.0 2472.9 2537.8 2233.8 2645.6 3480.8 2347.1 2735.4 2752.2 4031.5 3545.4 3586.0 False True 2890.265063399678 2666.9631801797877 2550.586429398865 3293.772118765496 2968.778930987878 2595.4685641211126 3232.386772408889 3142.3327782590095 3118.3716869826017 2744.491677612763 2695.4972314348734 1.0722567360461082 0.9894141789788089 0.9462396769152425 1.2219534415964315 1.1013845224420915 0.9628904581510132 1.1991801492922394 1.165771102122882 1.1568817992525344 1.0181764038213494 1.0 11.39633571242912 -6.222650794075178 24.993511923539714 1.0929757224630439 1.001314611147509 0.21682345808334302 0.0835234181641204 771.027335810687 496812.2794647491 0.012588462945564009 0.03330498231835173 5.98892957175604e-07 6.222650794075178 -0.09166111131553478 IFAPNHVVAK ddPTM_A549_PD325901_60min_R1 1 IFAPNHVVAK 10 0 M0R3D6;M0R1A7;Q02543;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 0 62.823 0.0073543 24258000.0 7391.5 7374.3 8064.2 7733.0 9206.7 8851.5 7482.2 8678.4 9064.9 8196.3 8915.9 False True 8141.879638665292 7995.758141108098 8611.485105973994 8210.64984708276 8560.053153390741 8779.416318705471 7766.939215416939 8505.302503926909 8683.933777038894 7678.784219210695 7819.30082254678 1.0412541764844707 1.0225668921769204 1.101311396172784 1.0500491071282911 1.0947338320464688 1.1227878959957927 0.9933035435880843 1.087731844182546 1.1105767605204502 0.9820295181724037 1.0 12.932823896678025 IFDLGS(ph)DNEEVVAGPAPAHAK ddPTM_A549_MK2206_60min_R1 2 IFDLGSDNEEVVAGPAPAHAK 21 0 A0A096LNM2;Q969U6-2;Q969U6 A0A096LNM2 FBXW5 F-box/WD repeat-containing protein 5 1 IFDLGS(1)DNEEVVAGPAPAHAK;IFDLGS(1)DNEEVVAGPAPAHAK 112.88 2.4785999999999997e-11 2750600.0 1631.8899999999999 1957.96 1832.05 1586.3899999999999 2608.09 1783.22 1842.88 2010.11 2639.98 2986.0 2997.6 True False 1907.3131361200617 2057.61180087667 2091.862238329388 1975.0556212157535 2224.4434159159314 1971.919156794364 2177.7074413748965 2295.049248203698 2042.0287451817762 2311.4605261329343 2253.2131904487383 0.846485873686995 0.9131900210769166 0.9283907298238316 0.8765507097099905 0.9872316678001174 0.8751587134112448 0.966489744781405 1.01856728778808 0.9062740950735764 1.0258507876356768 1.0 11.137768107002497 -9.573911076126581 0.01175469267612561 1.9045299065040764 2.8666687984196363e-07 0.4232386389792957 0.04524366309804728 1087.5908528898456 5.618980699152262 466.7709090171743 443.1676064535365 2.6674047725020827e-10 9.573911076126581 -1.9045296198371966 IFDLGS(ph)DNEEVVAGPAPAHAK ddPTM_A549_PD325901_60min_R1 1 IFDLGSDNEEVVAGPAPAHAK 21 0 A0A096LNM2;Q969U6-2;Q969U6 A0A096LNM2 FBXW5 F-box/WD repeat-containing protein 5 1 IFDLGS(1)DNEEVVAGPAPAHAK 116.65 4.0808e-15 2246900.0 1146.7 1216.7 1344.7 1254.7 1424.7 1519.5 1498.0 1560.5 1133.4 1429.8 1273.4 True False 1263.1121398440764 1319.2355790090216 1435.959428337991 1332.199969369551 1324.6339869481778 1507.1256957886203 1555.0072097370523 1529.374603311433 1085.7671395046702 1339.5221839888054 1116.7798727476832 1.1310305375905128 1.181285239107349 1.2858034634927746 1.1928939640466982 1.186119144222306 1.3495279889675527 1.392402610114356 1.369450364062004 0.9722302183269919 1.1994505064754575 1.0 10.125129130472748 -8.773676561751177 24.999913218765787 0.9868864612983114 1.2617857434421074 0.3940988202420006 0.1029329210699329 91.67639909606349 187289.38400517614 0.015072566817964875 0.01610264057907453 1.6839276893914544e-09 8.773676561751177 0.274899282143796 IFEYLDRT(ph)PR ddPTM_A549_MK2206_60min_R1 2 IFEYLDRTPR 10 1 Q03518;A0A140T9T7 Q03518 TAP1 Antigen peptide transporter 1 1 IFEY(0.009)LDRT(0.991)PR;IFEY(0.001)LDRT(0.999)PR 54.143 0.0078292 2397090.0 163.1 141.82 222.73 271.25 536.0 348.78 284.99 348.45 655.6 461.40000000000003 403.77 True False 190.62729258784717 149.03803223780332 254.3164631659097 337.7062621768753 457.1551100349064 385.68766809857334 336.76899402968843 397.84385458337033 507.10764677807117 357.16941954378314 303.5027655149073 0.6280907927294785 0.4910598820572623 0.8379378775493178 1.112695831960345 1.5062634083723103 1.270787985882881 1.1096076619214437 1.3108409536513077 1.6708501680956291 1.1768242669480382 1.0 8.245565852141892 -6.1893799944657575 2.0911038979440626 1.3142552569511 0.5614682055299975 0.7146093367739896 0.17957038149943944 0.17245873468355302 1.4421593740750898 0.03607618843053614 0.12299742223893616 6.465766332827709e-07 6.1893799944657575 -0.7527870514211024 IFEYLDRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 IFEYLDRTPR 10 1 Q03518;A0A140T9T7 Q03518 TAP1 Antigen peptide transporter 1 1 IFEY(0.023)LDRT(0.977)PR;IFEY(0.002)LDRT(0.998)PR 52.928000000000004 0.0087902 3725600.0 547.1600000000001 426.98 665.46 515.5 779.4200000000001 750.86 599.89 714.4300000000001 645.85 845.5799999999999 777.48 True False 602.7072804020975 462.9631030864404 710.6221173360598 547.3412642145564 724.6762280530277 744.7452451068393 622.7191422224039 700.1801331905075 618.7071705038743 792.1899344924138 681.8548888517896 0.8839230901710291 0.6789759971744834 1.0421896637460688 0.8027239712781885 1.0628012497986883 1.0922342235617817 0.9132722407711009 1.0268755781300867 0.9073883323557993 1.1618160219198883 1.0 9.413320929890464 -5.766670076366296 24.99999572697684 0.9675198015872363 0.7814495364789819 0.35089609812709865 0.10755755605928481 81.40516200831333 389083.17241683207 0.011681391187934695 0.03794129202757765 1.711314868364594e-06 5.766670076366296 -0.18607026510825442 IFFAGDTIPK ddPTM_A549_MK2206_60min_R1 1 IFFAGDTIPK 10 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 167.33 1.0922e-09 2105100.0 1824.2 2040.5 2369.9 1873.3 3136.1 2660.3 1680.7 1678.5 3553.0 2955.7 3217.3 False True 2132.0803625919734 2144.3527343198257 2705.9874559192285 2332.2585840956326 2674.7838443665473 2941.8111802357785 1986.0614346668208 1916.4325151906626 2748.2511729751172 2288.0053171771974 2418.3556170372053 0.881624004166949 0.8866986803813957 1.1189369490804701 0.9643985225601136 1.106034127289972 1.2164510295801214 0.821244576552393 0.7924527318023382 1.136413170012637 0.9460996145721101 1.0 11.23981069186808 -5.739832589276783 23.191516025255577 1.040242851957299 0.8841608328122342 0.09697238456961732 0.12664452152736114 136.4446561781956 146445.8502052469 0.017535621743233604 0.06773727379936702 1.8204024474453236e-06 5.739832589276783 -0.1560820191450648 IFGGEIK ddPTM_A549_PD325901_60min_R1 1 IFGGEIK 7 0 H7BZ94;P07237;I3L398;I3L312;I3L4M2;I3NI03 H7BZ94 P4HB Protein disulfide-isomerase 0 78.49600000000001 0.046389 5640200.0 2407.2 2408.7 2439.2 2741.4 2956.5 2747.2 2392.1 2719.8 3167.6 3001.6 2850.5 False True 2651.5771719130203 2611.689602333384 2604.738780101159 2910.730051828874 2748.845639371298 2724.8277140312557 2483.132674507347 2665.551455358175 3034.4767876257206 2812.078463743739 2499.9065708082867 1.0606705078004952 1.0447148836802147 1.0419344508778892 1.1643355339026757 1.0995793488724352 1.0899718196869437 0.9932901907228012 1.0662604300833256 1.2138360781397495 1.1248734239034057 1.0 11.287658462609336 IFGPIWNR ddPTM_A549_MK2206_60min_R1 1 IFGPIWNR 8 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 66.994 0.022763 1177700.0 551.79 455.01 763.35 455.42 727.89 694.67 640.56 536.81 996.27 699.18 715.02 False True 644.9186620297254 478.16806549515525 871.6045084079251 566.9979204445809 620.8183452300526 768.179518315374 756.9414604570585 612.9044614116774 770.6164357162736 541.2347523984009 537.4608004519134 1.1999361841597715 0.8896798893856016 1.6217080532664958 1.0549567893469287 1.1550951152308218 1.4292754330538437 1.4083658935137204 1.1403705365978851 1.4338095635408494 1.0070218180438726 1.0 9.070015725768139 IFGPIWNR ddPTM_A549_PD325901_60min_R1 1 IFGPIWNR 8 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 69.432 0.019584 2614300.0 1615.9 1389.8 1361.3 1647.5 1647.2 1686.3 1611.2 1218.5 1921.4 1757.0 1753.0 False True 1779.944978437293 1506.9233235035242 1453.6860041619004 1749.2623332560265 1531.5063545315081 1672.5673318909828 1672.5150976824698 1194.1960616052427 1840.6502398484868 1646.0627201485036 1537.3921131825743 1.1577690318396436 0.9801815103526346 0.9455531817140698 1.1378114394218253 0.9961715956517547 1.0879250111596972 1.0878910353066504 0.7767673915882934 1.1972548994271435 1.0706850295602004 1.0 10.586269457235813 IFHGS(ph)GVGDPFGPR ddPTM_A549_PD325901_60min_R1 1 IFHGSGVGDPFGPR 14 0 F8VWW7;Q8NCJ5 F8VWW7 SPRYD3 SPRY domain-containing protein 3 1 IFHGS(1)GVGDPFGPR 43.798 0.020125999999999998 9660900.0 1040.4 1463.5 716.62 1052.2 1581.0 2316.5 1150.3 1920.0 1694.4 1272.6 2049.2 True False 1146.0206420980005 1586.8342811536975 765.254142586132 1117.1920042804184 1469.956014153905 2297.6351920331276 1194.075295968313 1881.7040937891372 1623.1902604347224 1192.2478188167245 1797.1613909490754 0.6376837650027584 0.882967044109319 0.42581269909320923 0.6216425580400615 0.8179321131407268 1.2784801652230875 0.664422962780057 1.047042354273711 0.903196712665589 0.6634060940888019 1.0 10.811504258043476 -6.9604653995753765 5.381453896470099 0.9604504045293534 0.6487982541587365 0.3193065576349997 0.1896441760351904 0.12845274981525764 9.195062474562604 0.022412690133693125 0.0424994018957575 1.0953038152077961e-07 6.9604653995753765 -0.3116521503706169 IFIGTFK ddPTM_A549_PD325901_60min_R1 1 IFIGTFK 7 0 J3KRY3;S4R3P3;J3QLE5;P14678-2;P63162;P14678;P63162-2;P14678-3 J3KRY3 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated proteins B and B;Small nuclear ribonucleoprotein-associated protein N 0 107.43 0.025613 3160600.0 2429.4 2615.0 2763.1 3416.3 3073.8 2979.0 2632.9 2843.3 2904.2 3070.4 3046.0 False True 2676.030899570245 2835.375227343298 2950.620581870084 3627.317092019762 2857.906892034329 2954.7400116843014 2733.096450278163 2786.5881509743017 2782.14657362755 2876.5344200022564 2671.361310184894 1.001748018647851 1.0613971298203206 1.1045381883088894 1.3578534203479584 1.069831655170795 1.1060802596859478 1.023109992593625 1.0431341280380497 1.0414714636392588 1.0768047021700564 1.0 11.383359402963567 -7.6566277899654365 2.1679087470809058 1.0216597521180903 1.1274051172111401 0.1638823829611582 0.08610711938638684 0.342832682228356 3.2873508901836646 0.013661607295685899 0.02137793084572322 2.2048152800595334e-08 7.6566277899654365 0.10574536509304977 IFLGADAEEEIGT(ph)PR ddPTM_A549_MK2206_60min_R1 4 IFLGADAEEEIGTPR 15 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR 184.76 2.7721e-33 21858200.0 3309.89 4134.71 3710.67 3632.0699999999997 5547.4 3953.02 4390.07 4300.24 5954.6 5217.199999999999 5755.500000000001 True False 3868.518512958855 4345.149078225691 4236.898802926618 4521.9273130498195 4731.384808596344 4371.325952597695 5187.688893013487 4909.812188932675 4605.892607542255 4038.630896497237 4326.250506280928 0.8941966045060199 1.0043683489703903 0.9793466182264325 1.0452301147344114 1.0936455948926755 1.0104190560050383 1.1991189334695038 1.1348885557608193 1.0646384440418644 0.9335175784744504 1.0 12.078901489884695 -5.097749166541755 0.943054462039551 1.053960424506648 0.7803131233410762 0.33241841984692044 0.06847718532089689 2.36011089496193 1.2912422842437727 0.009962307260940276 0.7067248491667212 7.984557144980547e-06 5.097749166541755 -0.2736473011655719 IFLGADAEEEIGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 IFLGADAEEEIGTPR 15 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR 175.28 1.9146000000000002e-27 41817000.0 5547.8 5599.6 5843.1 5209.5 6110.6 5395.5 6024.799999999999 6286.4 5807.2 6933.0 6774.700000000001 True False 6111.0085719255 6071.497943797911 6239.647903414678 5531.278983367083 5681.412536425589 5351.5608368723215 6254.077060897061 6161.012820414605 5563.143579081986 6495.249196806821 5941.4548483616545 1.0285374084111065 1.0218874162566625 1.0501885586381674 0.9309637327114122 0.9562325527041964 0.9007155609956381 1.0526171149178405 1.0369535707426092 0.9363268292135575 1.0932085427860945 1.0 12.5366005230152 -6.2470947707238045 24.575461198321346 0.9720151659090286 1.0323727593567544 0.06189713447412559 0.0563417461216848 697.2141507416271 1194477.5411870074 0.006364454328155751 0.01675039260654182 5.661157391088079e-07 6.2470947707238045 0.060357593447725844 IFLGADAEEEIGT(ph)PRK ddPTM_A549_MK2206_60min_R1 2 IFLGADAEEEIGTPRK 16 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 IFLGADAEEEIGT(1)PRK;IFLGADAEEEIGT(1)PRK 108.56 3.8713e-07 14886100.0 1724.23 2125.1 1689.38 1571.79 2342.3 2091.68 1742.49 1353.6799999999998 2737.3 2780.1 2771.8 True False 2015.237870623813 2233.258512964008 1928.9594870166777 1956.8786205603355 1997.750772826047 2313.0201892551863 2059.0778778441063 1545.5682854711335 2117.3059205698805 2152.0734791366945 2083.485562211707 0.9672435015506197 1.0718857636783001 0.9258329032858795 0.9392331082357139 0.9588503078971908 1.1101685709786338 0.9882851675047409 0.7418185724457088 1.016232585899118 1.0329197946791522 1.0 11.024783387391418 IFLGADAEEEIGT(ph)PRK ddPTM_A549_PD325901_60min_R1 2 IFLGADAEEEIGTPRK 16 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 IFLGADAEEEIGT(1)PRK;IFLGADAEEEIGT(1)PRK 133.93 1.8603999999999999e-10 36254000.0 4382.299999999999 4186.9 4815.0 5086.1 5378.1 5054.9 4877.4 5278.3 5046.8 4921.6 5066.8 True False 4827.187869921247 4539.744756926827 5141.774854947148 5400.256845628813 5000.360809437773 5013.734570346756 5063.012126015688 5173.020165753753 4834.700546719757 4610.849336074492 4443.615721091535 1.086319828919745 1.0216330668241669 1.157115101232047 1.2152843955422605 1.125291006984168 1.1283006643776965 1.1393901821852417 1.164146607277518 1.0880104964459336 1.0376345808187657 1.0 12.11751834413286 -9.798189732146579 0.8022696610682603 1.009332474511117 1.1294253721654621 0.42531909710461846 0.04775886758314878 0.35722181168273576 0.4795292376901312 0.019999695276378116 0.010688936197447752 1.591513283720922e-10 9.798189732146579 0.12009289765434517 IFPGLS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 IFPGLSPVR 9 0 Q5VZK9-2;Q5VZK9;A0A0U1RR91;Q5VZK9-3 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 IFPGLS(1)PVR 68.735 0.0043278 2019700.0 282.14 282.63 290.7 280.72 336.25 257.3 287.2 311.98 291.71 420.27 487.28 True False 310.7826450995095 306.4482219900713 310.42865012110803 298.0594368386231 312.6329599995262 255.20463410754297 298.1295531618704 305.75731415642457 279.4504431488508 393.73408047627294 427.3476491224213 0.7272361173337831 0.717093501320008 0.7264077636991523 0.6974636164506869 0.7315658823478562 0.5971827261285229 0.6976276897137345 0.7154767664787949 0.653918288126109 0.9213437380194429 1.0 8.739266375785226 -10.74619012211492 0.8390597052455195 1.0141543375431035 0.6937994993810048 0.8420419092859872 0.04374384224740734 0.16547820495102467 0.19195753376398533 0.034764900499809834 0.007488170367260576 1.793948114029717e-11 10.74619012211492 -0.32035483816209864 IFPPETSASVAAT(ph)PPPSTASAPAAVNSSASADKPLSNMK ddPTM_A549_PD325901_60min_R1 2 IFPPETSASVAATPPPSTASAPAAVNSSASADKPLSNMK 39 1 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 1 IFPPET(0.008)S(0.008)AS(0.002)VAAT(0.978)PPPS(0.002)T(0.002)ASAPAAVNSSASADKPLSNMK;IFPPET(0.014)S(0.057)AS(0.024)VAAT(0.889)PPPS(0.005)T(0.005)AS(0.005)APAAVNSSASADKPLSNMK 87.57799999999999 5.1871e-09 13256400.0 3036.9 3371.0 3511.5 3424.5 4173.6 4082.6 3875.5 3628.1 4064.7 3624.8 3651.6000000000004 True False 3345.20385235238 3655.086000525528 3749.8115063648797 3636.023587396212 3880.4607341383567 4049.3526591817154 4022.984273254972 3555.7346993106103 3893.8747943750086 3395.92950938776 3202.476349399593 1.0445678554283613 1.1413311455713924 1.1709099762962816 1.135378747786194 1.211706289373807 1.2644442042299224 1.2562104553900013 1.1103078715873256 1.2158949417706209 1.0604073657013693 1.0 11.644972200824665 -10.81667426028642 0.947872245307014 0.9947900818601084 1.1772856917196013 0.41395538887022476 0.063772201719141 0.39405710414977424 0.5983172007161077 0.051034842113199475 0.011271618451307383 1.525196288316418e-11 10.81667426028642 0.18249560985949287 IFQGSFGGPTLYENPHYQS(ph)PNMHR ddPTM_A549_MK2206_60min_R1 2 IFQGSFGGPTLYENPHYQSPNMHR 24 0 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog 1 IFQGSFGGPT(0.001)LY(0.001)ENPHY(0.009)QS(0.99)PNMHR;IFQGSFGGPT(0.003)LY(0.003)ENPHY(0.011)QS(0.982)PNMHR 60.348 0.00029781 14871600.0 1735.0300000000002 2129.51 2505.06 2627.0 3283.6000000000004 2101.79 1804.37 2035.04 3329.2 3352.6000000000004 2806.7 True False 2027.8606465891626 2237.8929631273754 2860.3151763049136 3270.6151179305125 2800.586789758619 2324.200022744713 2132.2006728564115 2323.513152048619 2575.141515639953 2595.2453315181765 2109.718929020708 0.9611994368986666 1.0607540807183085 1.3557802117425275 1.5502610669795103 1.3274691482521792 1.1016633499247992 1.0106562744100416 1.101337775419757 1.2206088120161511 1.230137956207674 1.0 11.04283509083698 -7.278922134635792 21.744875213472067 1.0984150651883025 1.2629548194826319 0.15837070794202068 0.15867446674155622 205.42239546430602 255501.99208646122 0.02596433646863352 0.041601275283832465 5.2611158533721354e-08 7.278922134635792 0.16453975429432943 IFQGSFGGPTLYENPHYQS(ph)PNMHR ddPTM_A549_PD325901_60min_R1 2 IFQGSFGGPTLYENPHYQSPNMHR 24 0 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog 1 IFQGSFGGPT(0.052)LY(0.003)ENPHYQS(0.945)PNMHR;IFQGSFGGPTLYENPHYQS(0.999)PNMHR 96.46 6.885900000000001e-08 27050000.0 4287.6 4909.799999999999 5268.4 5307.200000000001 6662.3 5672.2 5565.200000000001 6704.7 6239.2 5589.3 5196.200000000001 True False 4722.873995635704 5323.566076944597 5625.945305462831 5635.013690474281 6194.363031687264 5626.007483811915 5776.986731394295 6570.969498764598 5976.988121402452 5236.390644124098 4557.100341425721 1.036377003311303 1.1681915424489164 1.2345449702568354 1.2365349165674344 1.3592772964374344 1.234558614535966 1.2676891660425726 1.4419189849808802 1.3115770278458492 1.1490619586589694 1.0 12.153900421842405 -10.74787900933356 1.0477922727443167 1.002955785214491 1.2605413514097883 0.2635105139428453 0.10662484308202078 0.3633240979255287 0.7210362527418785 0.06694511101933684 0.01795798876583482 1.7869853440906493e-11 10.74787900933356 0.25758556619529727 IFS(ph)KQQGK ddPTM_A549_MK2206_60min_R1 2 IFSKQQGK 8 1 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4;B1AL79;Q16512;Q16512-2;Q16512-3 Q16513-3;Q16512 PKN2;PKN1 Serine/threonine-protein kinase N2;Serine/threonine-protein kinase N1 1 IFS(1)KQQGK;IFS(1)KQQGK 64.297 0.0026454 14878600.0 5712.5 6953.299999999999 8213.0 6728.1 9664.7 6206.7 5885.4 5142.4 9891.0 11316.4 10606.2 True False 6676.6303427840385 7307.193270054418 9377.72689795545 8376.484802035884 8243.035432750676 6863.488874325979 6954.700998148451 5871.350947939508 7650.704292681364 8760.017380418873 7972.387823771484 0.8374693367119133 0.9165626950894639 1.1762758040939287 1.0506870698211008 1.0339481238195907 0.86090755066643 0.872348555022804 0.7364607790946575 0.959650290703251 1.098794686618091 1.0 12.96079617770693 -5.520920882155849 24.999295805873718 0.9695609546569559 0.8572426148355043 0.11173150389964115 0.11566675664739245 109.9328545370953 1403650.3714346068 0.015624942271644057 0.0625013418950983 3.0135549702723314e-06 5.520920882155849 -0.11231833982145156 IFS(ph)KQQGK ddPTM_A549_PD325901_60min_R1 2 IFSKQQGK 8 1 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4;B1AL79;Q16512;Q16512-2;Q16512-3 Q16513-3;Q16512 PKN2;PKN1 Serine/threonine-protein kinase N2;Serine/threonine-protein kinase N1 1 IFS(1)KQQGK;IFS(1)KQQGK 86.898 0.00075956 32679000.0 9568.6 9999.7 11455.1 12875.8 13071.0 14439.7 15222.3 15330.6 13842.6 12529.9 12664.599999999999 True False 10539.997227968986 10842.409812950207 12232.511971112159 13671.108922936535 12152.938052502022 14322.107870667285 15801.592956462175 15024.819156376956 13260.84366093819 11738.75997563389 11106.934487513989 0.9489564595719608 0.9761838268821023 1.1013400668621485 1.2308624794991903 1.0941757211374492 1.289474416794992 1.4226781452817383 1.352742214628826 1.1939247211591595 1.0568856770362853 1.0 13.439173067570453 -5.822053979921754 3.2190137554699847 1.1577586763697993 0.9550219039643218 0.31494933863524643 0.12493600555310123 0.2998234061559675 6.159421088987474 0.021464975323679678 0.08523185236015668 1.5064198165647215e-06 5.822053979921754 -0.2027367724054775 IFSNQPDS(ph)PISASQDKR ddPTM_A549_MK2206_60min_R1 2 IFSNQPDSPISASQDKR 17 1 O75161;O75161-2;D6RA06 O75161 NPHP4 Nephrocystin-4 1 IFS(0.033)NQPDS(0.873)PIS(0.093)AS(0.002)QDKR;IFSNQPDS(0.998)PIS(0.002)ASQDKR 127.32 2.5617e-12 11889800.0 4096.3 4767.4 4798.700000000001 3497.3 5809.299999999999 3883.6 4202.5 4131.8 7173.5 6399.1 6513.4 True False 4787.6552950803125 5010.040296788207 5479.22781751112 4354.138656999761 4954.7596655331745 4294.55997427496 4966.039851958892 4717.49530310681 5548.713703725586 4953.538865632038 4895.943019305046 0.9778821518555777 1.0233044537146916 1.1191363534882128 0.889336056369751 1.0120133437003271 0.8771670661486888 1.0143173301603898 0.9635519213572127 1.1333288973843487 1.0117639944133108 1.0 12.257371052201556 -8.735964859731745 24.998908048934993 1.0629608882350905 0.9855133454569971 0.13247771777399908 0.06998804630090406 283.7357186125154 278438.4369378281 0.012714385250684105 0.014414109619044244 1.836686950028238e-09 8.735964859731745 -0.0774475427780934 IFSNQPDS(ph)PISASQDKR ddPTM_A549_PD325901_60min_R1 2 IFSNQPDSPISASQDKR 17 1 O75161;O75161-2;D6RA06 O75161 NPHP4 Nephrocystin-4 1 IFSNQPDS(0.853)PIS(0.116)AS(0.031)QDKR;IFSNQPDS(0.989)PIS(0.01)AS(0.001)QDKR 119.79 4.0805e-10 17862000.0 6211.4 6557.4 6824.5 6692.8 7229.8 6548.4 6978.3 7604.0 9570.599999999999 9648.400000000001 10242.6 True False 6841.9767554089985 7110.015111197305 7287.651609052297 7106.199055548363 6722.003789455979 6495.072001515099 7243.863025172284 7452.3322547774 9168.380964658016 9039.198377393754 8982.825133191003 0.7616731544877015 0.7915121363017769 0.811287262191586 0.7910873194326561 0.7483173377848107 0.7230544851102796 0.8064125615010185 0.8296200966042939 1.0206567342362476 1.0062756697772568 1.0 13.132953534155124 -8.666484220033533 3.447701368282383 1.0103793002089767 0.7774452507628261 0.9406447498542043 0.025518141469865325 0.038734167968100176 0.9039021538953657 0.004889225334043738 0.005494930721606607 2.1553399558076393e-09 8.666484220033533 -0.2329340494461506 IFTSIGEDYDER ddPTM_A549_MK2206_60min_R1 2 IFTSIGEDYDER 12 0 P35232;C9JZ20;E7ESE2;E9PCW0;C9JW96;D6RBK0;P35232-2 P35232 PHB Prohibitin 0 ; 169.37 2.8926e-36 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IFTSIGEDYDER ddPTM_A549_PD325901_60min_R1 1 IFTSIGEDYDER 12 0 P35232;C9JZ20;E7ESE2;E9PCW0;C9JW96;D6RBK0;P35232-2 P35232 PHB Prohibitin 0 60.255 0.024425 1308100.0 2891.8 2619.3 2850.7 2872.3 2787.0 2910.6 3061.6 3282.5 2291.7 2550.1 3459.0 False True 3185.3734071693575 2840.03760343415 3044.1656446516768 3049.715447533403 2591.250734628043 2886.897038606355 3178.1108633718027 3217.027962428567 2195.387818601422 2389.086250797212 3033.5649284075985 1.0500429304611745 0.9362046537520341 1.003494474815689 1.0053239404815648 0.8541932662665183 0.9516516398156564 1.0476488680399139 1.0604777014340265 0.723698971478366 0.7875507223942324 1.0 11.566798474849202 -8.737006911195238 24.999357536917522 0.8695244481952921 0.984187625544344 0.3682605128706198 0.08542520987241492 288.0290173279317 294711.83489061886 0.01877658832306276 0.021285795647470237 1.8322852638567084e-09 8.737006911195238 0.11466317734905196 IFTTPLT(ph)PSQYYSGSK ddPTM_A549_MK2206_60min_R1 2 IFTTPLTPSQYYSGSK 16 0 P49454 P49454 CENPF Centromere protein F 1 IFT(0.001)T(0.038)PLT(0.806)PS(0.153)QYYS(0.001)GSK;IFT(0.015)T(0.098)PLT(0.5)PS(0.386)QYYS(0.001)GSK 126.63 8.3383e-09 10911200.0 2404.3999999999996 2293.44 2632.0 2255.82 3921.1000000000004 2759.2 3188.8 2676.5 4384.2 4409.9 3880.7 True False 2810.2039380638857 2410.1662999257346 3005.257177087389 2808.4960012676092 3344.311384249762 3051.1767125912706 3768.1636835042277 3055.9020714374815 3391.185700128766 3413.7005271914354 2917.01508812864 0.9633834084371237 0.8262440292936348 1.030250816774266 0.9627979000510932 1.1464840884300145 1.0459927770029807 1.291787518974277 1.047612706521152 1.1625533628296458 1.1702718100719305 1.0 11.51027713319234 -6.29903889561818 1.5188443590858407 1.093633131329746 0.9039659536869353 0.44534428905825263 0.0904155563736662 0.33176336068760803 1.4295067437920477 0.013778004481326399 0.05164587221188023 5.022976014982694e-07 6.29903889561818 -0.1896671776428107 IFTTPLT(ph)PSQYYSGSK ddPTM_A549_PD325901_60min_R1 2 IFTTPLTPSQYYSGSK 16 0 P49454 P49454 CENPF Centromere protein F 1 IFT(0.018)T(0.155)PLT(0.808)PS(0.018)QY(0.001)YSGSK;IFTTPLT(0.499)PS(0.499)QYYS(0.001)GSK 145.69 2.2933000000000002e-14 17666000.0 5151.4 4451.1 5560.9 4456.9 5966.4 5201.6 4797.3 5866.0 6877.9 5996.6 6278.7 True False 5674.366335739756 4826.2098181368065 5938.296114408222 4732.192590645691 5547.340646962594 5159.239894184982 4979.863876683289 5748.998028212022 6588.84578154153 5617.973652613845 5506.459703958598 1.030492665125734 0.876463295403259 1.0784236031254668 0.8593893072973392 1.007424179091805 0.9369431851968336 0.9043676235573397 1.0440461453080394 1.1965666028219193 1.0202514782002454 1.0 12.42690934227747 -8.481078599288638 6.866785425177837 1.0942465346451586 0.9563164308738017 0.3056219475852966 0.07788220791316003 0.19096946738805948 25.107971763616053 0.014379159797634756 0.01724479622797031 3.3030975565528197e-09 8.481078599288638 -0.13793010377135695 IFTTPLT(ph)PSQYYSGSKYEDLKEK ddPTM_A549_MK2206_60min_R1 1 IFTTPLTPSQYYSGSKYEDLKEK 23 2 P49454 P49454 CENPF Centromere protein F 1 IFT(0.009)T(0.041)PLT(0.944)PS(0.004)QY(0.001)YSGSKYEDLKEK 53.089 0.002493 1934100.0 778.69 1069.4 1013.9 1373.9 1590.2 1500.4 1057.7 1171.7 1685.1 1979.4 1956.4 True False 910.113834857331 1123.8278922232892 1157.6862659000396 1710.5055616767145 1356.2836865252027 1659.1713321150867 1249.8703989094395 1337.7920631807565 1303.4275405517499 1532.2521652469952 1470.5718861068563 0.6188842881164663 0.7642114627925292 0.7872354128602719 1.1631567132736713 0.9222831602716026 1.128249049087646 0.8499213202139375 0.909708716601664 0.8863405814199271 1.041943056115012 1.0 10.522161594011173 -6.037087839476199 9.398289730392689 0.9592695851388869 0.712183953869707 0.5762699022505011 0.10051408714639994 0.24586671490070283 61.218770019717006 0.013393651604320577 0.03600579405547924 9.181468752724881e-07 6.037087839476199 -0.24708563126917993 IFTTPLT(ph)PSQYYSGSKYEDLKEK ddPTM_A549_PD325901_60min_R1 1 IFTTPLTPSQYYSGSKYEDLKEK 23 2 P49454 P49454 CENPF Centromere protein F 1 IFT(0.001)T(0.008)PLT(0.989)PS(0.001)QYYSGSKYEDLKEK 102.27 1.5127e-10 2416300.0 2370.7 2138.3 2427.1 2022.4 3069.2 3084.9 1932.3 2842.7 2804.4 2907.1 2221.9 True False 2611.3717187828997 2318.5020453645025 2591.8176013379466 2147.3190547963495 2853.629980165191 3059.777597195337 2005.8347338951323 2786.0001184449907 2686.5408205637004 2723.54520987121 1948.620385784575 1.3401131066025875 1.1898171969657403 1.3300782544643246 1.101968895769184 1.4644360702488652 1.5702276438842528 1.029361464412434 1.4297295351979296 1.378688655913869 1.397678701167147 1.0 10.928237348634685 -10.785784609166567 0.9694633690899009 0.9948391123551706 1.3153809843670072 0.0 0.18973439076422882 0.4798067248846402 0.7799217053057981 0.10878275992935307 0.02567344013247657 1.6376285112867147e-11 10.785784609166567 0.3205418720118366 IFVGGLS(ph)PDTPEEK ddPTM_A549_MK2206_60min_R1 2 IFVGGLSPDTPEEK 14 0 D6RAF8;Q14103-3;Q14103;D6RF44;H0YA96;H0Y8G5;Q14103-4;Q14103-2 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IFVGGLS(0.999)PDT(0.001)PEEK;IFVGGLS(0.997)PDT(0.003)PEEK 147.87 3.1248e-13 6467600.0 2307.91 2721.8999999999996 2663.3 2318.54 3288.5 2747.0 3227.7 2527.6 3802.8999999999996 3183.3999999999996 4514.5 True False 2697.428785017893 2860.4330838251067 3040.995987741961 2886.5824040832167 2804.7660062496093 3037.6857166889768 3814.131309974473 2885.895040450357 2941.5492219834136 2464.26772903268 3393.425056138518 0.794898587826006 0.8429339197135772 0.8961435533226136 0.8506397979414778 0.826529526908497 0.8951680577692357 1.1239768808434183 0.8504372404600281 0.8668378329623971 0.7261889354459019 1.0 11.728526436189183 -7.522985368212772 24.999999991236095 0.9433892457657048 0.8472425394072465 0.0751069681822637 0.09680494597558541 4.12132728841119 966214.6818090038 0.012023908705765876 0.01793539928021632 2.999263565279763e-08 7.522985368212772 -0.09614670635845834 IFVGGLS(ph)PDTPEEK ddPTM_A549_PD325901_60min_R1 1 IFVGGLSPDTPEEK 14 0 D6RAF8;Q14103-3;Q14103;D6RF44;H0YA96;H0Y8G5;Q14103-4;Q14103-2 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IFVGGLS(0.868)PDT(0.132)PEEK 135.02 5.306999999999999e-09 5185900.0 1749.7 1851.0 2223.1 1602.2 2139.5 1745.7 1834.9 1856.4 2035.1 1924.4 1986.8 True False 1927.3282559389388 2006.9902660850644 2373.972934586293 1701.1642551397895 1989.2289008743082 1731.4835979849904 1904.728123595808 1819.3726456823733 1949.571824250887 1802.8930555798418 1742.4361953628847 1.1061112372826645 1.1518299903469824 1.3624446857245653 0.976313657663373 1.1416365811087996 0.9937142046250862 1.0931408155230178 1.0441545294595225 1.1188770236977679 1.0346967426284244 1.0 10.76689011302615 -2.0000000003222764 0.05697608980810176 0.8603403052905789 1.614191382811642 0.20433281117298863 0.09206375744674615 359.06486321564597 1.4912266474711848 4.125748157010433 22.68196154615872 0.009999999992579311 2.0000000003222764 0.7538510775210632 IFYYFSNS(ph)PSKR ddPTM_A549_MK2206_60min_R1 2 IFYYFSNSPSKR 12 1 Q08999;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IFYYFS(0.015)NS(0.968)PS(0.017)KR;IFYYFS(0.033)NS(0.952)PS(0.015)KR 83.729 0.00022610000000000002 15687500.0 2093.71 1879.09 2409.7 1528.88 2590.1 2043.48 2169.88 2181.28 2902.3 2890.2 3065.0 True False 2447.077061705099 1974.727654757677 2751.431694387341 1903.4556686340309 2209.0997210847227 2259.719697247758 2564.1191086183385 2490.483119889836 2244.9336840207393 2237.3018126689244 2303.8759103033685 1.0621566251729564 0.8571328194918493 1.1942621050389122 0.8261971315909061 0.9588622855967247 0.9808339447197936 1.1129588608271448 1.0809970748649806 0.9744160585997585 0.9711034360241747 1.0 11.169847298138889 -7.5506401522165065 24.99820914308073 1.0064379586191448 0.9756559497702934 0.03386775143868381 0.10052582579507564 843.9548633080791 759949.5024901173 0.014428562054489462 0.021401234898143925 2.814231681103287e-08 7.5506401522165065 -0.030782008848851405 IFYYFSNS(ph)PSKR ddPTM_A549_PD325901_60min_R1 2 IFYYFSNSPSKR 12 1 Q08999;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IFYYFS(0.001)NS(0.986)PS(0.013)KR;IFYYFS(0.005)NS(0.992)PS(0.003)KR 104.17 7.6566e-05 25776000.0 3751.7000000000003 3771.7000000000003 3754.8999999999996 4098.0 5057.4 3977.0 4160.7 4325.1 4540.0 4188.7 3975.4 True False 4132.569822144436 4089.5543957823024 4009.7300940479827 4351.124152766732 4702.185671082837 3944.612630570146 4319.037715322399 4238.832487524689 4349.199588275282 3924.2247671519867 3486.451002136909 1.1853227880189652 1.1729849044990852 1.1500893291173018 1.2480095518622945 1.3487026400774833 1.1314120370980179 1.2388063714864148 1.2158015371294855 1.2474575393744465 1.1255642958259726 1.0 11.767543491090809 -10.748885795033116 0.8624851474575231 0.991498526328332 1.2170129387517186 0.39537290329432884 0.06648953046520457 0.3156734351782491 0.3914575239624047 0.0473065625934951 0.010437085238696128 1.7828475352616975e-11 10.748885795033116 0.22551441242338655 IGAEVYHNLK ddPTM_A549_MK2206_60min_R1 2 IGAEVYHNLK 10 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90 P06733 ENO1 Alpha-enolase;Enolase 0 ; 66.435 0.0054543 1238480.0 0.0 0.0 0.0 0.0 0.0 212.2 198.174 343.58000000000004 88.67299999999999 94.829 0.0 False True 0.0 0.0 0.0 0.0 0.0 234.65486315303997 234.1796505941944 392.2835171696206 68.58870708168381 73.40706303839922 0.0 0.0 IGAEVYHNLK ddPTM_A549_PD325901_60min_R1 2 IGAEVYHNLK 10 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90 P06733 ENO1 Alpha-enolase;Enolase 0 ; 127.76 1.6504e-06 118221000.0 20609.0 21304.9 21786.2 22595.4 25297.0 25372.3 21791.2 24107.3 29098.0 22646.8 23310.6 False True 22701.210508456057 23100.338692553058 23264.742543063243 23991.066540123356 23520.225989912302 25165.676400959244 22620.476040602185 23626.460989689007 27875.112251020728 21216.877183072942 20443.543978068272 1.1104342051852554 1.1299576393082815 1.1379994861958151 1.1735277682705527 1.1504965095653024 1.2309840420993958 1.1064850627107177 1.1556930156060687 1.363516632973471 1.0378277467856991 1.0 14.31935769502207 -5.955654216460825 1.3774539338991458 1.1726042734067232 1.1121833710126128 0.0 0.09199377352391047 2.018774409424643 6.463109272155221 0.018788054862170705 0.1179881781945852 1.1075052242861714e-06 5.955654216460825 -0.060420902394110465 IGAS(ph)FLQR ddPTM_A549_PD325901_60min_R1 1 IGASFLQR 8 0 P00505-2;P00505 P00505-2 GOT2 Aspartate aminotransferase, mitochondrial 1 IGAS(1)FLQR 47.603 0.037211 1622500.0 446.48 492.73 727.49 702.94 702.97 749.19 666.57 541.18 766.87 715.98 767.76 True False 491.80632091879613 534.2540863360853 776.8618461527514 746.3590073074295 653.595812314846 743.0888450331527 691.9366861111 530.3857403525033 734.6411207622606 670.7729006100889 673.3303872316328 0.7304086229359638 0.7934501345359543 1.1537602652195507 1.1084588211977935 0.9706910971329771 1.1036021233028388 1.0276332380541537 0.7877050411064322 1.0910559432535105 0.9962017359233423 1.0 9.39517076453838 -5.651789979800675 6.20699826783426 1.0346298572822246 0.7477955162927975 0.5449449993407962 0.09351004598150366 0.10513010594771395 5.260965793389019 0.012621129351146659 0.05022574702003434 2.229513057454408e-06 5.651789979800675 -0.28683434098942706 IGDEYAEDS(ph)S(ph)DEEDIR ddPTM_A549_MK2206_60min_R1 1 IGDEYAEDSSDEEDIR 16 0 Q14137;Q14137-2;A0A075B729 Q14137 BOP1 Ribosome biogenesis protein BOP1 2 IGDEY(0.05)AEDS(0.975)S(0.975)DEEDIR 48.74100000000001 0.027645999999999997 915370.0 420.17 409.72 287.6 378.92 551.01 495.25 296.87 402.17 830.41 615.37 573.84 True False 491.08442382977194 430.57299794438546 328.3860046087892 471.755417010365 469.9571589185334 547.6570262796562 350.80743625247726 459.1788290939705 642.3234608922787 476.35748960697407 431.33969082169176 1.1385097042525065 0.9982225311196247 0.7613164556760862 1.0936981387260751 1.0895291319546234 1.269665272946208 0.8132973703027364 1.0645411003546783 1.4891359978226626 1.1043673924361668 1.0 8.752680665218804 -8.546375070601638 24.974691722277107 1.2333944746770735 1.0208208721648744 0.1528416369030382 0.17405590648028216 298.37717092623177 317149.3073210665 0.036125417158554655 0.04096340041120723 2.842005600360446e-09 8.546375070601638 -0.21257360251219914 IGDEYAEDS(ph)S(ph)DEEDIR ddPTM_A549_PD325901_60min_R1 2 IGDEYAEDSSDEEDIR 16 0 Q14137;Q14137-2;A0A075B729 Q14137 BOP1 Ribosome biogenesis protein BOP1 2 IGDEY(0.014)AEDS(0.988)S(0.998)DEEDIR;IGDEYAEDS(1)S(1)DEEDIR 109.07 6.7264e-07 15501500.0 9698.099999999999 9737.599999999999 8417.2 10037.2 10256.6 8299.2 9282.5 8907.9 10126.599999999999 9167.9 10870.2 True False 10682.643972636124 10558.221726110174 8988.44180873544 10657.175047864868 9536.211799349112 8231.614066790991 9635.750617078907 8730.224946387638 9701.014218200096 8589.037229396396 9533.23431187519 1.120568699263917 1.1075172790999372 0.9428533396623723 1.1178971059789884 1.0003123271050007 0.8634649896874117 1.0107535702836985 0.9157673734624068 1.0175994736766207 0.9009573192486579 1.0 13.21875004067372 -5.707101411094826 9.43734477588663 0.9963214613225455 1.1148342870191579 0.34818394081174076 0.06852057168914576 0.2897849324938678 47.14036595597233 0.008168875904088501 0.03166420528593165 1.962901870664963e-06 5.707101411094826 0.11851282569661237 IGDEYAEDS(ph)SDEEDIR ddPTM_A549_MK2206_60min_R1 2 IGDEYAEDSSDEEDIR 16 0 Q14137;Q14137-2;A0A075B729 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 IGDEYAEDS(0.983)S(0.017)DEEDIR;IGDEYAEDS(0.986)S(0.014)DEEDIR 222.45 9.673799999999999e-55 13227000.0 1006.5 1087.2 785.51 740.67 1562.1 1220.6 1129.1 1338.5 1320.9 1805.3 1258.1 True False 1176.372593437573 1142.533836193342 896.9071296253474 922.1341832499394 1332.3171593013574 1349.7630818312946 1334.2428546928702 1528.2364739843324 1021.7182590438587 1397.4814761646974 945.6790482064179 1.243944862338539 1.2081623658262075 0.9484265632472543 0.9751026894366183 1.408847073252009 1.4272951107368463 1.4108833829229963 1.6160202310528053 1.0804069953560431 1.4777545075310397 1.0 9.885206823522953 -8.974479746894673 24.917350360173433 1.0354734380007993 1.2747247460422082 0.0 0.22858876119854182 187.3601572983884 182935.71072435123 0.035772493177353704 0.03718092789859559 1.0605233941956937e-09 8.974479746894673 0.23925130804140893 IGDEYAEDSS(ph)DEEDIR ddPTM_A549_MK2206_60min_R1 2 IGDEYAEDSSDEEDIR 16 0 Q14137;Q14137-2;A0A075B729 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 IGDEYAEDS(0.008)S(0.992)DEEDIR;IGDEYAEDS(0.013)S(0.987)DEEDIR 338.23 4.913199999999998e-187 30951000.0 3420.0 3937.9 3032.1000000000004 2323.5 4145.1 3889.8 3695.5 3743.8999999999996 5223.799999999999 4775.0 5398.3 True False 3997.2123890278217 4138.322289869168 3462.0973733460023 2892.757604305879 3535.3612809807687 4301.41605415973 4366.924514673194 4274.609290212883 4040.617640694461 3696.3241836184725 4057.753124499407 0.9850802319377047 1.01985561045676 0.8532055221504169 0.7128964024056417 0.8712608117126188 1.0600487319421097 1.076192755125271 1.0534424246768903 0.9957771004594914 0.9109287998082626 1.0 11.986465378220224 -7.25170377628969 24.31245222963766 1.0129723901432477 0.8840473953514655 0.36261568500665664 0.08409224731006527 417.2838836835943 1042070.045463624 0.0125161526838217 0.02150174963622954 5.6013953136622685e-08 7.25170377628969 -0.1289249947917822 IGDEYAEDSS(ph)DEEDIR ddPTM_A549_PD325901_60min_R1 2 IGDEYAEDSSDEEDIR 16 0 Q14137;Q14137-2;A0A075B729 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 IGDEYAEDS(0.019)S(0.981)DEEDIR;IGDEYAEDS(0.083)S(0.917)DEEDIR 278.85 6.850399999999998e-107 36833000.0 5501.650000000001 5098.200000000001 5203.55 4898.9 5392.110000000001 4270.139999999999 4962.1 3924.62 4949.79 5146.95 6236.849999999999 True False 6060.173457899336 5527.843206134456 5556.694194488105 5201.493926790858 5013.38679536965 4235.365395600406 5150.935430865307 3846.340375295169 4741.767539658392 4821.970698616018 5469.756988649592 1.1079419927567038 1.0106195243418308 1.0158941623949507 0.9509552138394058 0.916564813715314 0.7743242349503465 0.9417119337393091 0.7032013274587502 0.8669064365195992 0.8815694570384371 1.0 12.417261022788134 -6.039424194026243 1.2950168243916949 0.9050064933217145 1.0812610475032862 0.44353668821360115 0.08198385628236135 0.5227530588335274 1.4815514443800923 0.014078476699633597 0.08293779648078853 9.132208238076779e-07 6.039424194026243 0.17625455418157177 IGEEQS(ph)AEDAEDGPPELLFIHGGHTAK ddPTM_A549_MK2206_60min_R1 2 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 0 E9PC52;Q16576;Q16576-2;Q5JNZ6 E9PC52 RBBP7 Histone-binding protein RBBP7 1 IGEEQS(1)AEDAEDGPPELLFIHGGHTAK;IGEEQS(1)AEDAEDGPPELLFIHGGHTAK 147.3 1.1869e-32 16773400.0 1423.37 1405.18 1092.06 1615.92 1855.7 1428.65 1229.17 1740.3200000000002 2426.1 2163.69 1929.88 True False 1663.600057944599 1476.69765999095 1246.930529183152 2011.820472541405 1582.728988230926 1579.8287947388808 1452.4942783658082 1987.015689506474 1876.592223685599 1674.9109262520321 1450.6375340216214 1.1468061586222569 1.0179646020167985 0.8595741527011714 1.386852625386032 1.0910575185815754 1.0890582641682383 1.0012799505738965 1.369753396630959 1.2936327508933936 1.1546033292056457 1.0 10.502471367681368 -6.238942590076015 24.995647676956548 1.1544740163025267 1.0090999762776511 0.20731792612384403 0.1403700673426541 1244.7105403268563 1382966.241002815 0.021870718914295983 0.05782395483485476 5.768427119030251e-07 6.238942590076015 -0.14537404002487553 IGEEQS(ph)AEDAEDGPPELLFIHGGHTAK ddPTM_A549_PD325901_60min_R1 2 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 0 E9PC52;Q16576;Q16576-2;Q5JNZ6 E9PC52 RBBP7 Histone-binding protein RBBP7 1 IGEEQS(1)AEDAEDGPPELLFIHGGHTAK;IGEEQS(1)AEDAEDGPPELLFIHGGHTAK 196.84 2.782099999999999e-68 30026000.0 4467.8 5315.5 6089.7 5635.8 6125.0 5281.299999999999 5899.6 5972.0 5638.700000000001 6495.5 6039.1 True False 4921.367766979475 5763.455839748875 6502.983662340942 5983.9105661695385 5694.801130102889 5238.290843809432 6124.11250638499 5852.883775056633 5401.725048107452 6085.373021471039 5296.328985009057 0.9292035636209747 1.088198232410032 1.227828497955329 1.1298222944810719 1.075235535069986 0.9890418171975536 1.1562938261046332 1.1050831229749645 1.0198998331479618 1.1489794230485537 1.0 12.3707770235557 -8.824168136539019 5.339250619572844 1.0088020394901458 1.0922680175432455 0.0 0.08601903298948961 0.23956437746348716 13.249863330107685 0.013192020375961531 0.014052956742299214 1.4991043468603564e-09 8.824168136539019 0.08346597805309974 IGEGT(ph)Y(ph)GVVYK ddPTM_A549_PD325901_60min_R1 4 IGEGTYGVVYK 11 0 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P06493-2;P24941-2;G3V317;G3V5T9;P24941;Q00526 E5RIU6;G3V5T9 CDK1;CDC2;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 2 IGEGT(1)Y(0.978)GVVY(0.022)K;IGEGT(1)Y(0.835)GVVY(0.165)K;IGEGT(1)Y(0.998)GVVY(0.002)K;IGEGT(1)Y(0.998)GVVY(0.002)K 144.28 1.8895e-11 352529000.0 50505.8 57021.3 56207.6 58426.1 62278.5 55329.7 57718.2 62563.8 59072.9 62588.4 61146.5 True False 55633.11163559515 61826.68506726977 60022.185739756416 62034.94750169945 57904.2730091613 54879.113267703586 59914.69768561092 61315.91592864835 56590.27144454336 58636.55774259684 53625.868139599675 1.0374305081788175 1.1529265112561273 1.1192767189056174 1.1568101301448235 1.0797824821860975 1.023370160177947 1.1172723121169819 1.1434018330300932 1.0552793531887765 1.0934379204818327 1.0 15.71064147788298 -9.496081369932584 0.6834482493028593 1.0045758106085498 1.106758082483397 0.05289686735323873 0.050389289339580354 0.40720057184987957 0.4153345824238528 0.017141469649742648 0.010456066449724431 3.1909399407729346e-10 9.496081369932584 0.10218227187484707 IGEGT(ph)YGVVY(ph)K ddPTM_A549_MK2206_60min_R1 2 IGEGTYGVVYK 11 0 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P06493-2;P24941-2;G3V317;G3V5T9;P24941;Q00526 E5RIU6;G3V5T9 CDK1;CDC2;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 2 IGEGT(1)Y(0.049)GVVY(0.951)K;IGEGT(1)YGVVY(1)K 175.22 1.914e-15 162874000.0 31288.0 36621.0 31913.0 27434.0 47476.0 36144.0 33357.0 33515.0 53792.0 46115.0 48995.0 True False 36568.64948184283 38484.85247906216 36438.74327218462 34155.33123155905 40492.34329107691 39968.734089554564 39417.5351199983 38265.85388538284 41608.19788817267 35697.58947174154 36828.189306790744 0.9929526857053476 1.0449835629569206 0.9894253276651233 0.9274235816220581 1.0994931885942743 1.0852755685760727 1.0703088004581889 1.0390370693116593 1.1297921149900394 0.9693006944862008 1.0 15.16852284704694 -6.777509710329989 24.999375784481437 1.0656389108095061 0.9927688633061157 0.2877196870274892 0.049519454195693154 226.53124627286374 352397.04245428415 0.0076765398946316045 0.014539502351077024 1.6691304869371574e-07 6.777509710329989 -0.07287004750339043 IGEGT(ph)YGVVYK ddPTM_A549_MK2206_60min_R1 2 IGEGTYGVVYK 11 0 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P06493-2;P24941-2;G3V317;G3V5T9;P24941;Q00526 E5RIU6;G3V5T9 CDK1;CDC2;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(1)YGVVYK;IGEGT(1)YGVVYK 152.4 4.6508e-12 831040000.0 14658.4 16015.900000000001 15913.699999999999 12700.0 19626.7 14903.0 13746.7 14826.4 21637.0 19322.1 20291.0 True False 17132.37955652788 16831.040900560118 18170.501952513525 15811.500570124666 16739.638429332266 16480.025568189238 16244.297449833031 16928.087603945696 16736.254047189013 14957.224190218743 15252.184696889284 1.1232738061467396 1.103516724656032 1.1913376551373285 1.0366711972317944 1.0975239784990507 1.0805026227849428 1.0650472553709693 1.1098795313826888 1.0973020835895337 0.9806610978995882 1.0 13.89672828620034 -14.999999999969983 0.18697317431343533 0.5554633741133194 1.1212437494161063 0.593828028338224 0.03578860388753278 27.67284446805932 0.31414085665787544 4.493966305450762 0.03568012637888728 1.0000000000691163e-15 14.999999999969983 0.5657803753027869 IGEGT(ph)YGVVYK ddPTM_A549_PD325901_60min_R1 7 IGEGTYGVVYK 11 0 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P06493-2;P24941-2;G3V317;G3V5T9;P24941;Q00526 E5RIU6;G3V5T9 CDK1;CDC2;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(1)YGVVYK;IGEGT(0.748)Y(0.252)GVVYK;IGEGT(1)YGVVYK;IGEGT(0.999)YGVVY(0.001)K;IGEGT(0.785)Y(0.215)GVVYK;IGEGT(1)YGVVYK;IGEGT(1)YGVVYK 202.69 3.5821e-24 1749668800.0 90142.7 86887.20000000001 86203.1 83555.99999999999 98406.7 92361.1 92606.1 88529.9 92090.70000000001 91816.7 100798.1 True False 99293.92054445177 94209.48927465493 92053.3607473509 88717.06435055564 91494.95287668503 91608.9418238251 96130.27581150216 86764.10169413718 88220.44813303587 86019.37789246389 88400.57271180168 1.1232271183147642 1.0657113001042553 1.0413208639208462 1.0035801989630289 1.0350040737289279 1.0362935331028131 1.0874395138241966 0.9814880043481208 0.9979624048437667 0.9730635815324317 1.0 16.4317680958381 -2.0000000000000004 0.31653659423087854 1.000042447517682 2.0437958250134525 0.5751343885246057 0.028922406835703334 25.742026602921197 0.32155350007153566 0.008599203533039003 15.75565242206561 0.00999999999999999 2.0000000000000004 1.0437533774957706 IGEGTY(ph)GVVYK ddPTM_A549_MK2206_60min_R1 3 IGEGTYGVVYK 11 0 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P06493-2;P24941-2;G3V317;G3V5T9;P24941;Q00526 E5RIU6;G3V5T9 CDK1;CDC2;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(0.187)Y(0.813)GVVYK;IGEGT(0.014)Y(0.986)GVVYK;IGEGT(0.012)Y(0.988)GVVYK 202.97 3.3745e-24 525924000.0 26185.800000000003 31162.4 26766.1 23210.2 34572.5 26819.0 27219.1 26425.3 34956.8 36237.5 37183.8 True False 30605.322858656327 32748.433054627843 30561.93545882932 28896.70004194548 29486.931047913804 29656.9687789886 32164.458140262766 30171.16719908719 27039.14061453886 28051.423581963216 27950.03623932737 1.0950011869964165 1.1716776598861378 1.0934488670117304 1.0338698595777167 1.0549872206041697 1.0610708524685013 1.1507841301116257 1.079467909835285 0.9674098589000458 1.0036274494160828 1.0 14.770562533181922 -8.71077982493006 6.170501187618538 0.9846193618950715 1.0934497780557924 0.5798694412144862 0.038721575698195426 0.09798221753004185 8.298797081706866 0.006976870745838622 0.00786437018535672 1.9463465744317267e-09 8.71077982493006 0.10883041616072087 IGEGTY(ph)GVVYK ddPTM_A549_PD325901_60min_R1 2 IGEGTYGVVYK 11 0 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P06493-2;P24941-2;G3V317;G3V5T9;P24941;Q00526 E5RIU6;G3V5T9 CDK1;CDC2;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(0.131)Y(0.869)GVVYK;IGEGT(0.181)Y(0.819)GVVYK 190.88 4.644200000000001e-19 385930600.0 32175.1 30562.8 28964.2 25807.5 31804.8 29928.0 30935.2 26836.5 31264.5 28853.4 31631.9 True False 35441.49246594326 33138.43441615594 30929.884787883722 27401.570661914953 29570.940568603513 29684.276290596787 32112.455964390974 26301.224954673016 29950.561790227428 27031.591399847963 27741.3768311351 1.27756789728497 1.1945490167223256 1.114936903678481 0.9877509263044661 1.0659507186180834 1.0700361583092408 1.1575653277724147 0.948086503232033 1.0796350149648262 0.9744141959641123 1.0 14.759751771326242 -5.7204907563072505 1.927823295091346 1.0421547786608791 1.2738381913706562 0.6542582966355938 0.05693667376052425 0.1727943783411782 1.1360512773860396 0.00762213263088032 0.05154850129882043 1.9033087479092536e-06 5.7204907563072505 0.2316834127097771 IGEGTYGT(ph)VFK ddPTM_A549_MK2206_60min_R1 2 IGEGTYGTVFK 11 0 Q00535-2;Q00535 Q00535-2 CDK5 Cyclin-dependent-like kinase 5 1 IGEGTYGT(1)VFK;IGEGT(0.001)YGT(0.999)VFK 111.63 6.5349e-05 4762300.0 4232.3 4057.1 4062.1 3775.9 5871.7 4085.0 4010.7 3657.8 7177.0 6253.1 6656.1 True False 4946.608770199546 4263.589060724806 4638.166861339926 4700.995669506593 5007.980708193959 4517.271988596462 4739.392274658307 4176.304351542694 5551.4209593139385 4840.5203670334395 5003.206670985404 0.9886876748238123 0.8521712855577626 0.9270388305639227 0.9395965385097135 1.0009541954835166 0.902875352879789 0.9472709376854228 0.8347255322795115 1.109572585019871 0.9674835930933224 1.0 12.288637332644798 -8.77053403196371 24.999415117832083 1.0517426089877664 0.9249956031325258 0.3522018706794382 0.05846719348863013 114.97079750670493 316031.25934777234 0.010040377210023668 0.010762579808378178 1.6961566836833548e-09 8.77053403196371 -0.12674700585524057 IGEGTYGT(ph)VFK ddPTM_A549_PD325901_60min_R1 2 IGEGTYGTVFK 11 0 Q00535-2;Q00535 Q00535-2 CDK5 Cyclin-dependent-like kinase 5 1 IGEGT(0.002)YGT(0.998)VFK;IGEGT(0.002)YGT(0.998)VFK 106.26 3.5771999999999996e-05 3120600.0 3607.3 4095.7 3819.7 3896.5 4835.7 4234.7 3722.3 3499.6 4927.5 4246.8 4148.5 True False 3973.510440446095 4440.859012860398 4078.927811722037 4137.177955406435 4496.0571142593535 4200.21400721031 3863.954163420715 3429.797732616912 4720.414310842828 3978.6563232365766 3638.260799508218 1.0921455770799038 1.220599417573547 1.121120237524859 1.1371306740752767 1.2357709801526826 1.1544565490681842 1.062033311065277 0.9427025498228484 1.2974370368064005 1.0935599569372183 1.0 11.829033247297291 -7.544749982017129 24.43806874048313 1.1201579692858736 1.1644689508196246 0.08876036861793035 0.09416326866771953 658.4521968024694 735726.1389366612 0.018951681563216694 0.028111430439738804 2.852660036124573e-08 7.544749982017129 0.044310981533751015 IGEGTYGVVYK ddPTM_A549_MK2206_60min_R1 3 IGEGTYGVVYK 11 0 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P06493-2;P24941-2;G3V317;G3V5T9;P24941;Q00526 E5RIU6;G3V5T9 CDK1;CDC2;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 0 ;; 166.19 1.7590999999999996e-31 11110700.0 8681.5 9941.7 9823.2 7974.9 13523.7 9543.5 8518.0 9440.900000000001 13366.8 12766.5 13934.7 False True 10146.724957703216 10447.690065565988 11216.277470351382 9928.750858006864 11534.381644737068 10553.386835537409 10065.610341222091 10779.176486543662 10339.24114239341 9882.538783280677 10474.32941184482 0.9687231094936604 0.9974567015002692 1.0708348982864275 0.947912793995099 1.1012047827800313 1.0075477312755878 0.9609789749250648 1.0291042092254716 0.9871029195149577 0.9435008576401158 1.0 13.354570262120902 -7.525215309139668 24.996276357594546 0.9942550655711465 1.0191676874068751 0.09097944563244309 0.04520134349569714 152.2401784970698 1628664.5991237278 0.0059371556062151444 0.008832483344218892 2.983902929717269e-08 7.525215309139668 0.02491262183572862 IGEGTYGVVYK ddPTM_A549_PD325901_60min_R1 2 IGEGTYGVVYK 11 0 E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P06493-2;P24941-2;G3V317;G3V5T9;P24941;Q00526 E5RIU6;G3V5T9 CDK1;CDC2;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 0 ; 152.97 8.212e-12 24159000.0 13007.6 12615.2 12200.3 11979.6 14546.0 12802.3 13032.599999999999 12155.8 14026.400000000001 14060.900000000001 14826.1 False True 14328.121976310997 13678.327177048253 13028.285724363792 12719.552684354412 13524.339140975779 12698.042313389038 13528.562724712365 11913.343032959376 13436.919186119918 13173.092374351798 13002.583690391417 1.1019442225854787 1.0519699394172093 1.0019766866789228 0.9782327103000185 1.0401270595912353 0.9765783951671523 1.0404518860901186 0.9162289062413832 1.0334037838994619 1.0131134463749987 1.0 13.666510703338137 -5.479126207785318 2.611800917175201 1.0069062340700923 1.1036179096212135 0.4432039299807131 0.03450036616292857 0.23564816574055522 2.6986043913924065 0.004553850050994264 0.03970331631566561 3.3179802165389006e-06 5.479126207785318 0.09671167555112126 IGELFSK ddPTM_A549_PD325901_60min_R1 1 IGELFSK 7 0 P78527;P78527-2;F5GX40 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 78.49600000000001 0.046389 1040600.0 1151.4 1523.2 1431.3 990.8 1596.7 1433.0 1103.1 1242.8 1454.8 1558.1 1773.0 False True 1268.289280384119 1651.5654096708647 1528.436625106095 1051.999465729936 1484.5533003159662 1421.3301231096366 1145.0790741394815 1218.011379042261 1393.6598152032768 1459.7213000929898 1554.9322399730204 0.8156556586710975 1.0621462255484013 0.9829602768623634 0.6765564689482477 0.9547382594251983 0.9140784958798578 0.7364173464943718 0.7833211941527399 0.8962833102151501 0.938768431554495 1.0 10.602635997374964 -10.065485049753816 1.0165910674726797 0.9878817553001671 0.8718557386818265 0.10708968239613326 0.10794325519990136 0.6524756620076267 1.3552962477587946 0.04030764924377708 0.02053669360923126 8.6003267232804e-11 10.065485049753816 -0.11602601661834056 IGFPS(ph)TSPAK ddPTM_A549_MK2206_60min_R1 2 IGFPSTSPAK 10 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.333)T(0.333)S(0.333)PAK;IGFPS(0.333)T(0.333)S(0.333)PAK 121.61 4.2501000000000005e-05 54049000.0 11060.2 11769.900000000001 12004.2 10729.7 15186.0 11486.0 11273.1 10642.6 17316.8 16083.8 15926.900000000001 True False 12926.891364071782 12368.937636692444 13706.576065802603 13358.476981674532 12952.159516772559 12701.440896210268 13321.276348630056 12151.22114159557 13394.57244924726 12450.458409315763 11971.81116992194 1.0797774188544997 1.033171795072098 1.1449041311509405 1.1158275712898362 1.081888056279542 1.0609456427212496 1.1127202191510104 1.0149860342037786 1.1188426094541044 1.0399811885269605 1.0 13.547353808205282 -10.944109137768876 1.0839674728344075 0.9976672633946881 1.087049975674026 0.2809993501920015 0.03820008619728957 0.40950351373711685 0.8168872969090488 0.028977164091340497 0.006074940635491797 1.137341437142723e-11 10.944109137768876 0.0893827122793378 IGFPS(ph)TSPAK ddPTM_A549_PD325901_60min_R1 2 IGFPSTSPAK 10 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.333)T(0.333)S(0.333)PAK;IGFPS(0.333)T(0.333)S(0.333)PAK 146.71 3.7142e-08 94004000.0 15513.3 15557.400000000001 16346.8 15903.0 18140.5 16233.2 18341.1 18003.4 16934.8 17140.1 17792.300000000003 True False 17088.198795712135 16868.476696700047 17456.192149293867 16885.292191666522 16866.373861327585 16101.002201300314 19039.080597135024 17644.308063605928 16223.089248353344 16057.871160852223 15603.959894682443 1.0951193742516279 1.0810381986721544 1.118702705410223 1.0821158414679555 1.0809034357410359 1.031853600622702 1.220144163765969 1.130758357666556 1.0396777073159416 1.0290894919772553 1.0 13.9296245750127 -8.931190295613929 3.9425503774394044 1.0165725267471482 1.1043756152948487 0.40643138070368534 0.04456601663665835 0.1539414309627271 4.4874176104634245 0.008264416898499135 0.00860400592778361 1.1716818550545392e-09 8.931190295613929 0.08780308854770058 IGFPST(ph)TPAK ddPTM_A549_MK2206_60min_R1 2 IGFPSTTPAK 10 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 IGFPS(0.002)T(0.499)T(0.499)PAK;IGFPS(0.004)T(0.498)T(0.498)PAK 152.64 2.2856999999999997e-08 100707000.0 12150.3 13593.9 13111.7 12010.3 18223.4 12221.599999999999 11517.8 11410.5 19410.8 17863.2 18557.3 True False 14200.973593685598 14285.77144575853 14971.136219155298 14952.824039162859 15542.762000392013 13514.881599958497 13610.435171181944 13027.973318190681 15014.284792678129 13827.890713468792 13949.010254575112 1.018063169681006 1.0241423000655523 1.0732758773508637 1.071963083134053 1.1142555433489747 0.9688774582071709 0.97572766259297 0.9339711621416049 1.0763691845271688 0.9913169795637226 1.0 13.76787513949115 -7.265116667346864 24.98642710306823 1.0191681887407151 1.0596933975566438 0.271514214332538 0.04512492668468639 533.5817185772006 3625576.1917873467 0.00786769671850333 0.012871566565291235 5.431044142283931e-08 7.265116667346864 0.04052520881592869 IGFPST(ph)TPAK ddPTM_A549_PD325901_60min_R1 3 IGFPSTTPAK 10 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 IGFPS(0.02)T(0.608)T(0.372)PAK;IGFPS(0.002)T(0.669)T(0.329)PAK;IGFPS(0.002)T(0.499)T(0.499)PAK 142.71 5.0499999999999996e-08 111309000.0 19851.7 21841.1 20691.3 23204.6 23409.9 23279.300000000003 23301.3 23207.100000000002 26081.4 23487.0 23027.4 True False 21867.029969950876 23681.72614834713 22095.536044894667 24637.895440529748 21765.66938377074 23089.721099027316 24188.04372246061 22744.216184882258 24985.289458511663 22004.0268116835 20195.175782715563 1.0827848296654194 1.1726427342422836 1.0940997138438162 1.2199891551137958 1.0777657802017901 1.143328552692723 1.19771394825701 1.1262202631753442 1.2371909869631248 1.089568471620637 1.0 14.30172308314174 -11.006793933466012 1.291814554268291 1.000107187750945 1.1589735207361227 0.28888669797032074 0.05739291547158634 0.2697936299535083 0.8024482535044829 0.03735397945611064 0.008513879334515929 9.844781157743468e-12 11.006793933466012 0.1588663329851776 IGFPSTS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 IGFPSTSPAK 10 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.011)T(0.011)S(0.978)PAK;IGFPS(0.017)T(0.017)S(0.967)PAK 111.06 0.00017059 8039100.0 5056.5 5093.7 4193.1 5173.799999999999 5539.5 5170.6 5613.700000000001 6116.6 5265.0 6066.0 6063.4 True False 5569.8321576014405 5522.963975341701 4477.6689811586475 5493.37387544766 5150.424630237546 5128.4923479069685 5827.332425434507 5994.59961462013 5043.730359530692 5682.991724769964 5317.64023905945 1.047425532229423 1.0386118140851452 0.8420406006914504 1.0330472970129496 0.968554546508494 0.9644301075948799 1.0958493172650596 1.1273044706161648 0.9484903327011822 1.0687055666208691 1.0 12.376570460714085 -5.55833294823647 24.99994389586949 0.987682965993688 1.0452236333246738 0.0 0.07605477635678064 295.2255534469745 208172.91261044942 0.009881610418253126 0.038271705428313464 2.7648212056265722e-06 5.55833294823647 0.05754066733098584 IGFPSTT(ph)PAK ddPTM_A549_PD325901_60min_R1 1 IGFPSTTPAK 10 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 IGFPS(0.009)T(0.059)T(0.932)PAK 118.4 7.0252e-05 77607000.0 5715.4 6087.7 6788.2 6206.2 8012.9 6879.0 7501.3 7723.0 7846.4 7698.9 8053.5 True False 6295.623200544901 6600.731843785011 7248.888072762665 6589.542878697143 7450.101547004321 6822.979704725179 7786.766076368859 7568.958706423703 7516.643094591008 7212.79014009751 7062.970555342757 0.8913562857461725 0.9345546313784238 1.0263228504158597 0.9329704586850514 1.0548113557359688 0.966021258514799 1.1024774937619681 1.0716395668247822 1.0642325400755173 1.0212119792346328 1.0 12.786059366757968 -5.052467167280024 0.6083889903923316 1.0364447457315251 0.7593418680517201 0.527081134057811 0.04410671706365634 2.5507102283968637 0.5361742100317067 0.007806226948536823 0.5221904049537428 8.862022181313697e-06 5.052467167280024 -0.277102877679805 IGGDPGLS(ph)PR ddPTM_A549_MK2206_60min_R1 1 IGGDPGLSPR 10 0 C9K0D8;Q66S35;Q16877-2;Q16877-3;Q16877 C9K0D8 PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 IGGDPGLS(1)PR 57.347 0.013372 9788800.0 2361.7 2636.1 2104.1 2200.3 1926.2 1852.8 1460.8 1690.2 2377.0 3347.8 3263.3 True False 2760.2972219786548 2770.266230306539 2402.4930191145804 2739.37359877522 1642.8585316217109 2048.862066210898 1726.2084510985253 1929.7910260204112 1838.6132952890105 2591.52965485192 2452.9325475017904 1.125304984350223 1.1293691027614843 0.9794370503833949 1.1167749400875935 0.6697528365771386 0.8352704473254181 0.7037325395908651 0.786728125885819 0.7495572176094126 1.05650261662975 1.0 11.260291846840257 -6.738553465961011 24.97390558523638 0.842388697671622 1.0829618394108422 0.5347251440463439 0.11571461414469825 163.52386529599204 178441.96519902302 0.017651264320622376 0.036724503808289136 1.8257719645893775e-07 6.738553465961011 0.24057314173922018 IGGELR ddPTM_A549_MK2206_60min_R1 1 IGGELR 6 0 Q96KN1 Q96KN1 FAM84B Protein FAM84B 0 86.344 0.019226 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IGGIGTVPVGR ddPTM_A549_MK2206_60min_R1 2 IGGIGTVPVGR 11 0 Q5VTE0;P68104;A0A087WVQ9;A0A2U3TZH3;Q05639 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 0 ; 134.26 1.6144000000000002e-07 57577000.0 19650.3 22959.0 22351.0 20944.0 27413.0 20386.3 20188.9 20132.0 30626.0 29775.0 30801.0 False True 22966.79023629047 24127.515034182255 25520.70788946817 26075.28094021189 23380.58401378153 22543.564734669282 23856.961800645557 22985.77265166426 23689.259899672375 23048.806820364407 23152.26163564571 0.9919890591133574 1.04212346136565 1.1022986994141406 1.1262519986412833 1.009861774271948 0.9737089658645155 1.0304376382787104 0.9928089537600456 1.0231942033343253 0.9955315460360027 1.0 14.498865510018067 -6.937513159868741 24.998374523289954 1.0083035184916893 1.0667831262423364 0.4186470221122566 0.03487737262981947 52.962777368488474 21187.664365962708 0.005049069966557991 0.009541844848785508 1.1547469933420322e-07 6.937513159868741 0.05847960775064709 IGGIGTVPVGR ddPTM_A549_PD325901_60min_R1 2 IGGIGTVPVGR 11 0 Q5VTE0;P68104;A0A087WVQ9;A0A2U3TZH3;Q05639 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 0 ; 138.4 5.547999999999999e-08 96267000.0 8043.6 7686.8 8212.599999999999 8274.2 9294.2 7601.099999999999 8255.2 8953.9 8447.6 8878.1 9858.0 False True 8860.180350614643 8334.593612826948 8769.95642237569 8785.278541928386 8641.407455249358 7539.199161736674 8569.35615341877 8775.30744030133 8092.576749320326 8317.535250853978 8645.528495010725 1.0248280779743877 0.9640351792995401 1.0143921713330506 1.0161644307804099 0.999523332811436 0.8720345050146435 0.9911893944209526 1.015011106072405 0.9360418803767168 0.9620620943709769 1.0 13.077738442147504 -7.037405448790638 24.9969499335736 0.9672243472944322 1.0032735055974509 0.21612580696541472 0.038478197961204094 820.7179670836314 548460.0515420531 0.005994135583836865 0.01038409040257418 9.174756592968285e-08 7.037405448790638 0.03604915830301869 IGGKGT(ph)AR ddPTM_A549_PD325901_60min_R1 1 IGGKGTAR 8 1 P20290;P20290-2;E9PL10;Q96K17-3;Q96K17 P20290 BTF3;BTF3L4 Transcription factor BTF3;Transcription factor BTF3 homolog 4 1 IGGKGT(1)AR 40.496 0.03891 22251000.0 5967.8 6360.8 5530.6 6003.1 5450.8 4499.6 3663.9 4722.8 5561.9 7186.0 8702.4 True False 6573.64666273784 6896.846939229545 5905.939774199519 6373.897852970709 5067.954612239156 4462.956749437627 3803.331719463012 4628.600049035076 5328.152685028255 6732.27473362957 7632.059969058769 0.8613201009148441 0.9036678127779576 0.7738329884910319 0.8351477685986758 0.6640349568511273 0.5847643712878249 0.49833619427548365 0.6064679873847877 0.6981277278518757 0.882104538083161 1.0 12.897856792054226 -10.553847028501071 0.9522972724991304 0.9925697060081278 0.712339744107063 0.3250112322224443 0.12256040679085663 0.44165798059467287 0.7423845544013438 0.07909957776028305 0.02452652281214409 2.793527631906047e-11 10.553847028501071 -0.28022996190106475 IGGNEGIDVPIPR ddPTM_A549_PD325901_60min_R1 2 IGGNEGIDVPIPR 13 0 Q96AE4;E9PEB5;Q96AE4-2 Q96AE4 FUBP1 Far upstream element-binding protein 1 0 ; 89.54799999999999 0.00051961 3132300.0 2822.7 2715.3999999999996 2950.0 2339.0 3241.6000000000004 2720.4 2682.1000000000004 2906.0 2717.0 2921.4 3398.8 False True 3109.2584260380895 2944.2362876971297 3150.2047397910865 2483.4747177455815 3013.921198912903 2698.245964345747 2784.1687832014363 2848.0375502871025 2602.8139386220114 2736.9423054307586 2980.769146768358 1.0431060820020346 0.9877438146758746 1.0568429102288663 0.8331657352391999 1.0111219790974042 0.905218026451692 0.9340437471381946 0.9554706889578624 0.8732021201453618 0.9182000251170247 1.0 11.541468931138732 -6.222611091714075 24.99943731754892 0.9364384209327357 1.025082235121356 0.42827166732485855 0.051065797502719765 494.73142097777014 318530.29002814804 0.007837317908771365 0.02073526171625368 5.989477093134195e-07 6.222611091714075 0.08864381418862033 IGIEIIK ddPTM_A549_MK2206_60min_R1 1 IGIEIIK 7 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 108.09 0.025097 3222100.0 1275.9 1376.3 1389.4 1329.1 1901.3 1206.0 1501.3 1771.1 2225.6 1861.6 1724.4 False True 1491.2407272399396 1446.347791347403 1586.4378122512242 1654.7295596655665 1621.6212886368792 1333.6181195219895 1774.0667768580333 2022.158848766271 1721.5051535528912 1441.0632670626485 1296.1838889811193 1.1504854673144773 1.1158507705911402 1.2239295872580722 1.2766163610984906 1.2510734799454835 1.0288803393246122 1.3686844836904737 1.5600863935716813 1.328133429359395 1.1117737840387858 1.0 10.340054691851876 -10.803055326689325 1.1452811110616024 1.0053213699567969 1.2600873245360111 0.23102494458485312 0.13635459032756725 0.4640492006399054 1.1148572018474097 0.08922379505560164 0.024254355084374807 1.5737823606195236e-11 10.803055326689325 0.25476595457921425 IGIEIIK ddPTM_A549_PD325901_60min_R1 2 IGIEIIK 7 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 105.12 0.027427999999999998 14259200.0 5239.4 5228.6 5037.5 4960.8 6609.8 4849.1 5394.4 5084.3 5598.6 5904.2 5669.1 False True 5771.3000309575755 5669.232471773293 5379.375042948341 5267.217349205763 6145.550450572101 4809.6105373139835 5599.686843928944 4982.88964794381 5363.310311655943 5531.407804382924 4971.836639385814 1.1607984029963063 1.1402692572122863 1.0819693873958158 1.0594107834275983 1.2360724811206345 0.9673709910766757 1.1262813423050622 1.0022231238392743 1.0787382411499524 1.1125481799953578 1.0 12.279563178916563 -2.000000000326199 0.05978028471800927 0.8757419553304997 1.5383132912131365 0.11381101970500662 0.0710254226178925 235.2938020771279 1.0221176592681265 2.27066093869923 13.533897996056105 0.00999999999248899 2.000000000326199 0.6625713358826368 IGIEIIKR ddPTM_A549_MK2206_60min_R1 2 IGIEIIKR 8 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 55.531000000000006 0.0341 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IGIEIIKR ddPTM_A549_PD325901_60min_R1 1 IGIEIIKR 8 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 55.676 0.033795 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IGIHHKNS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 IGIHHKNSPPK 11 1 A0A2R8YFF1;Q8N302 A0A2R8YFF1 AGGF1 Angiogenic factor with G patch and FHA domains 1 1 IGIHHKNS(1)PPK 91.85799999999999 0.00012437 4824900.0 2532.2 2793.2 2279.7 1937.6 2863.9 2714.5 2462.6 2485.8 2809.4 3081.6 3035.3 True False 2789.267079892884 3028.592766736251 2434.414150949743 2057.281151391122 2662.749543918642 2692.3940119896056 2556.3155905864264 2436.2187689276243 2691.330687951667 2887.0272500908536 2661.9773423520046 1.0478177389099832 1.1377229695202145 0.9145134754598637 0.7728394673612812 1.0002900857022152 1.0114263443019114 0.9603070431575423 0.9151913993283992 1.0110268953580677 1.0845423828964693 1.0 11.378282576341826 IGISDIS(ph)SLSEK ddPTM_A549_MK2206_60min_R1 2 IGISDISSLSEK 12 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 IGISDIS(0.982)S(0.018)LSEK;IGIS(0.001)DIS(0.943)S(0.052)LS(0.004)EK 142.91 9.8025e-12 3094200.0 2122.39 2310.58 2295.75 2294.68 2982.6 2196.76 1977.58 2514.2400000000002 3990.3999999999996 3033.2 3554.3 True False 2480.5975445464187 2428.178652714875 2621.3218709340335 2856.8767030121003 2543.8634910263295 2429.2196851087297 2336.8806877898555 2870.6412195370717 3086.5807713593867 2347.9980133511112 2671.669216310364 0.9284822871793165 0.9088620095223634 0.9811550976936204 1.0693227610555442 0.9521625938930655 0.9092516656921837 0.8746893790306649 1.0744747897726248 1.1553004962276074 0.8788505699046644 1.0 11.383525681122961 -8.288100698188641 22.811085712310916 1.0754708610068706 0.9497127591848686 0.08750405949108309 0.08280066739864297 190.71926326478746 163176.34006932427 0.01217928584689376 0.014727513964737057 5.151091943493366e-09 8.288100698188641 -0.12575810182200198 IGISDIS(ph)SLSEK ddPTM_A549_PD325901_60min_R1 2 IGISDISSLSEK 12 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 IGISDIS(0.983)S(0.016)LSEK;IGISDIS(0.992)S(0.008)LSEK 124.86 5.1714999999999995e-06 6320200.0 3872.8 3834.1 4539.9 3990.0 4438.9 5005.8 4465.7 4896.4 4490.6 5026.2 4390.799999999999 True False 4265.963804995324 4157.213062775122 4848.00491463646 4236.453238052531 4127.12697737367 4965.034424467701 4635.644657224808 4798.737460848509 4301.875698482156 4708.8448742233395 3850.759435574467 1.1078240218241302 1.0795826465734382 1.2589737156388272 1.1001604511865657 1.0717696201029951 1.2893649960574605 1.203826085420797 1.2461794981312875 1.117149946771575 1.2228353790999311 1.0 11.910927282649155 -9.81373579981509 0.9726541327667199 1.0171563793262748 1.166928735299611 0.0 0.0955459693967513 0.3463813355983209 0.6741839754883275 0.025037912289764333 0.014794489465605904 1.535550840947996e-10 9.81373579981509 0.14977235597333616 IGLPHS(ph)IK ddPTM_A549_MK2206_60min_R1 2 IGLPHSIK 8 0 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23 G3XAC6 RBM39 RNA-binding protein 39 1 IGLPHS(1)IK;IGLPHS(1)IK 52.57899999999999 0.0082482 4406500.0 1161.76 1406.76 1137.3899999999999 978.72 1819.6100000000001 1537.97 1179.0 1456.4699999999998 1887.68 1282.13 1811.25 True False 1357.8366856950172 1478.3580752422245 1298.6890048052526 1218.506443936411 1551.9477794227912 1700.716964578138 1393.2090387768076 1662.929082752306 1460.1234940055363 992.4959425220422 1361.4666370430596 0.9973337933892187 1.0858569979012038 0.9538897020832238 0.8949954488659811 1.1399087845394682 1.2491800520884515 1.0233148583080145 1.2214247764190433 1.0724636610829827 0.7289902782176308 1.0 10.410945914005037 -5.236019224033104 20.95189264713947 1.0545745478198267 0.9973331545477829 0.0 0.14137456426760864 2883.8300157401427 2376566.459756554 0.014162071059276518 0.9329264830557085 5.807387105695646e-06 5.236019224033104 -0.057241393272043806 IGLPHS(ph)IK ddPTM_A549_PD325901_60min_R1 2 IGLPHSIK 8 0 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23 G3XAC6 RBM39 RNA-binding protein 39 1 IGLPHS(1)IK;IGLPHS(1)IK 98.943 0.00074457 8032500.0 4006.2 4425.3 4768.799999999999 3822.2999999999997 6203.0 4540.1 4328.0 4448.9 4472.7 4593.7 5184.200000000001 True False 4412.9064747914335 4798.2355615917 5092.439445123978 4058.3947899268646 5767.322679188281 4503.126930865358 4492.704408372476 4360.163199405464 4284.7279732332245 4303.652998034254 4546.576265351455 0.9705999013854245 1.0553513856477215 1.1200602712710301 0.8926265728467103 1.2684979515553032 0.9904435047494495 0.9881511155131114 0.9589992435920173 0.9424075882958957 0.9465700665424948 1.0 12.150564837818147 -7.4985816510611105 24.989181151518054 0.9726604517699539 1.0624193893831864 0.2079909110413588 0.08835424812115464 913.3566561388791 939374.1706357609 0.01213530007166593 0.019337763308961455 3.172622127782454e-08 7.4985816510611105 0.0897589376132325 IGNLQTDLSDGLR ddPTM_A549_MK2206_60min_R1 2 IGNLQTDLSDGLR 13 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 104.87 0.00030108 4846400.0 3002.1 3699.3 3320.2 3178.2 4618.6 3452.3 3389.1000000000004 3533.7 5287.1 4731.299999999999 5271.1 False True 3508.781085701878 3887.5785690121706 3791.0542854732357 3956.859142674817 3939.210058222426 3817.62009454873 4004.8556007790307 4034.6127965023825 4089.580291763791 3662.4960439694423 3962.1403950408126 0.8855771718976998 0.9811814275632518 0.9568197760529346 0.9986670708658871 0.9942126389950525 0.9635246896669865 1.0107808410301873 1.0182912250036065 1.0321644071175489 0.9243731111985789 1.0 11.952064286454494 -2.954020325597393 0.4490006653891892 1.0136907061063933 2.6109302231680157e-16 0.3543866437392934 0.033294034068152685 11.988446207996681 0.30062137580992204 0.004237321983257317 10.074305989696466 0.001111679697878339 2.954020325597393 -1.0136907061063931 IGPLGLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 IGPLGLSPK 9 0 P30050 P30050 RPL12 60S ribosomal protein L12 1 IGPLGLS(1)PK;IGPLGLS(1)PK 105.46 0.00056737 202300000.0 11222.9 11995.6 10541.2 10471.9 17155.6 13729.2 11643.6 12330.5 18406.8 18673.7 17896.6 True False 13117.051146438684 12606.12480264979 12036.100666836475 13037.51597010145 14632.033965885892 15182.014831294613 13759.091402800374 14078.386135572517 14237.689189619574 14455.298200552097 13452.380298967473 0.9750728759463835 0.9370925087225912 0.8947190310818299 0.9691605262677665 1.0876910733046228 1.1285746086482478 1.0227997645782019 1.0465349494061724 1.0583769469193773 1.074553192765566 1.0 13.715573849110816 -6.5775787045684515 6.234206907375392 1.0403316216627936 0.9350492812333784 0.6583067571613848 0.03903170556737718 0.1103585473517055 9.102023367120765 0.006183057565849126 0.01303600659722678 2.64497331873319e-07 6.5775787045684515 -0.1052823404294152 IGPLGLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 IGPLGLSPK 9 0 P30050 P30050 RPL12 60S ribosomal protein L12 1 IGPLGLS(1)PK;IGPLGLS(1)PK 94.616 0.00094307 368060000.0 14383.7 15013.8 14932.599999999999 15056.6 16545.0 15848.2 14476.3 16543.2 16280.7 15775.1 17834.4 True False 15843.92263527971 16279.065616935683 15946.016033018439 15986.611985980384 15382.936277151413 15719.137513653965 15027.20351823532 16213.232898110653 15596.478796659329 14779.057493804585 15640.881861576332 1.0129814146990122 1.040802287301148 1.019508757507574 1.0221042603264832 0.9835082454616199 1.0050032762071988 0.960764466558079 1.0365932715047461 0.9971610894251375 0.9448992470246246 1.0 13.933034236277589 -6.654448918877741 7.262612201028443 0.9982671004830089 1.025152207297805 0.2766167672808447 0.02415552145979636 0.18772218487679468 11.538586380886867 0.002332699871457751 0.0048714444123403615 2.2159047126638363e-07 6.654448918877741 0.026885106814796056 IGPLGLS(ph)PKK ddPTM_A549_MK2206_60min_R1 1 IGPLGLSPKK 10 1 P30050 P30050 RPL12 60S ribosomal protein L12 1 IGPLGLS(1)PKK 44.543 0.023241 4763100.0 1272.3 1699.4 1872.1 1543.5 2250.3 1890.4 1199.0 1389.9 2433.2 1933.7 2381.0 True False 1487.0331352514904 1785.8922012757225 2137.5919305567245 1921.6575692903486 1919.2838509543853 2090.4408732540373 1416.8427798926143 1586.9225813902324 1882.084085021969 1496.8758269870239 1789.731987743009 0.8308691722757633 0.9978545466619676 1.1943642652620818 1.0737124789917332 1.0723861807793642 1.1680189478483007 0.7916508111805963 0.8866816887993743 1.0516010765362824 0.8363687061741018 1.0 10.80552784483108 IGPLGLS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 IGPLGLSPKK 10 1 P30050 P30050 RPL12 60S ribosomal protein L12 1 IGPLGLS(1)PKK;IGPLGLS(1)PKK 86.31299999999999 0.00032289 14956700.0 5879.4 5330.799999999999 5409.299999999999 6208.7 6182.700000000001 6829.9 7039.6 6664.0 6409.4 5389.6 6402.799999999999 True False 6476.272359814479 5780.045224444229 5776.407626763361 6592.197298019232 5748.448481157085 6774.279558846124 7307.495830216924 6531.0812921931365 6140.035207288892 5049.299736205112 5615.296190693313 1.1533269376864095 1.0293393310265568 1.0286915294578887 1.1739714298499546 1.023712425122731 1.2063975485520582 1.3013553661386965 1.1630875861931609 1.0934481457033862 0.8992045236320262 1.0 12.455146407301221 -9.812508584549919 1.0663110695945646 1.0154665503375586 1.1302548373473742 0.34258787957654513 0.08826313624311634 0.48049565889551893 1.1167625605501799 0.02708412239523923 0.016742090209362535 1.5398960871613878e-10 9.812508584549919 0.11478828700981558 IGPLGLSPK ddPTM_A549_MK2206_60min_R1 2 IGPLGLSPK 9 0 P30050 P30050 RPL12 60S ribosomal protein L12 0 ; 101.54 0.0020202 7876700.0 4254.5 4188.5 4497.0 3429.6000000000004 6012.5 4383.5 3954.1000000000004 4079.5 5761.0 5315.4 5378.7 False True 4972.555587461652 4401.676759470029 5134.742220882215 4269.852153960595 5128.06921471059 4847.359060468193 4672.508787300571 4657.781617944777 4456.142698426582 4114.647448294371 4043.0203454318867 1.22991109680663 1.0887100195880486 1.2700263125521591 1.056104542927913 1.2683758122821902 1.1989450080173625 1.1556975696597542 1.1520549539671485 1.1021816161428601 1.0177162360667846 1.0 11.981217748271654 -9.440239135365088 0.5898475966598001 1.0069898743282883 1.1845022819105313 0.5181978254924346 0.0631298999936885 0.3689686835769897 0.2868537531297508 0.02618696773456446 0.01547439573471223 3.628781883038289e-10 9.440239135365088 0.17751240758224296 IGPLGLSPK ddPTM_A549_PD325901_60min_R1 2 IGPLGLSPK 9 0 P30050 P30050 RPL12 60S ribosomal protein L12 0 ; 137.9 0.00011998 13581500.0 6458.8 7644.9 7430.1 7008.8 8303.8 7915.2 7373.299999999999 7616.299999999999 8018.4 7271.5 8936.1 False True 7114.492621282742 8289.162552778884 7934.351266820936 7441.717657860298 7720.569734554843 7850.741235476193 7653.894966324578 7464.386921628236 7681.414532737117 6812.376249038043 7837.016350605129 0.9078062751181324 1.0576936657965301 1.0124198944931755 0.9495600525684358 0.9851414606221544 1.0017512895542195 0.9766337881550531 0.9524526411192034 0.9801452732893688 0.8692563527077535 1.0 12.936088791621279 -10.655092053471375 1.1239719107999855 0.9992379121631566 0.9826559446175799 0.0 0.05335429124166367 1.5947003200523777 3.80824212885949 0.0184849651144589 0.005926685460581672 2.2126256696572897e-11 10.655092053471375 -0.016581967545576726 IGPPS(ph)PGDDEEEAAAAAGAPAAAGATGDLASAQLGGAPNR ddPTM_A549_PD325901_60min_R1 1 IGPPSPGDDEEEAAAAAGAPAAAGATGDLASAQLGGAPNR 40 0 H0Y6K5;A0A494C070;Q02447-2;Q02447 H0Y6K5 SP3 Transcription factor Sp3 1 IGPPS(1)PGDDEEEAAAAAGAPAAAGATGDLASAQLGGAPNR 159.58 2.6963999999999994e-52 15989000.0 766.42 967.6 770.89 808.54 1243.2 985.12 1117.6 321.3 738.68 1058.9 830.38 True False 844.2263941914165 1049.1430477924955 823.2072311381529 858.4816794724295 1155.8819208071695 977.0975093354947 1160.1308795741854 314.891419445026 707.6358484288954 992.0408732869954 728.2485242125185 1.1592558942763516 1.4406387557420344 1.1303932706603377 1.1788306476840948 1.5872080510661748 1.3417088766394214 1.5930425411142122 0.43239554764018157 0.97169554746999 1.362228470506995 1.0 9.508287062537962 -8.233863519785796 24.982395278676993 0.9446925843764227 1.3450774343403644 0.38187777496813635 0.24828265095208324 492.72678190499875 446387.24810308823 0.03328019898433554 0.04295949966314338 5.836284849736828e-09 8.233863519785796 0.40038484996394175 IGQGYLIK ddPTM_A549_MK2206_60min_R1 2 IGQGYLIK 8 0 P39023;G5E9G0;B5MCW2 P39023 RPL3 60S ribosomal protein L3 0 ; 105.12 0.005565 6176800.0 3815.2 4861.0 4460.7 4104.8 5790.9 4281.1 3917.1 3872.2 6316.0 5715.299999999999 6827.799999999999 False True 4459.11248731548 5108.4041369902825 5093.294335043208 5110.476184271472 4939.066281158845 4734.123160435813 4628.786366236333 4421.0962081151565 4885.436084579465 4424.209760551762 5132.268822306477 0.8688384497582736 0.9953500710616577 0.992405992629639 0.9957538003581794 0.962355334874917 0.9224230694736417 0.9018986585656137 0.8614311450132274 0.9519057270238461 0.8620378070070561 1.0 12.325381023766855 -10.100071689734518 1.1394782759467172 0.9937189186645354 0.9422268909853236 0.0 0.060326540071799516 0.5910898071899258 1.537520583129228 0.016785760879212665 0.008903249938411106 7.941971244226782e-11 10.100071689734518 -0.051492027679211794 IGQGYLIK ddPTM_A549_PD325901_60min_R1 2 IGQGYLIK 8 0 P39023;G5E9G0;B5MCW2 P39023 RPL3 60S ribosomal protein L3 0 ; 114.78 0.0036544000000000004 11664900.0 9132.400000000001 8964.400000000001 8224.6 8778.7 10769.7 10089.3 9040.400000000001 9850.900000000001 9578.0 10009.1 12090.1 False True 10059.514525082457 9719.861448564538 8782.770814537547 9320.940361125746 10013.273425448016 10007.136085896756 9384.437369096695 9654.416071618447 9175.469968392206 9377.123717836303 10603.094345458429 0.9487338504529294 0.9167004585531957 0.8283214812946966 0.8790773766073428 0.944372755650991 0.9437939303240345 0.88506591220857 0.9105281681996611 0.8653577596734571 0.8843761464645233 1.0 13.372197733524873 -10.902862593997972 1.1096105704203607 1.0009982039352525 0.8992846385469893 0.0 0.048651149629971746 0.34472148026498944 0.7415847249199172 0.0274776344545765 0.006288021103530156 1.2506546610203022e-11 10.902862593997972 -0.10171356538826326 IGQQVDREPGDVAT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 IGQQVDREPGDVATPPR 17 1 H3BT22;Q9Y5N6 H3BT22 ORC6 Origin recognition complex subunit 6 1 IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR 198.1 1.5886e-48 211240000.0 10865.3 13461.699999999999 11391.8 12074.5 15462.3 12149.6 12155.2 12624.8 17761.9 16848.6 18685.7 True False 12699.09700891929 14146.84303043039 13007.32853721281 15032.753042044897 13187.816152784957 13435.262607748238 14363.642500542705 14414.404061828465 13738.858009925907 13042.4895581391 14045.524990915392 0.9041382943772506 1.0072135459216034 0.9260834711145305 1.0702877287796677 0.9389336576108619 0.9565511162052063 1.0226490294832746 1.0262631030987923 0.9781662144214733 0.9285868322170191 1.0 13.777822929797667 -7.739536823487991 24.994922206096994 0.9949998105617845 0.9705519046296319 0.0530669924374233 0.047992600518411956 516.2172216823766 589099.2260792387 0.006228611932091223 0.009234366229470244 1.8216426108974844e-08 7.739536823487991 -0.024447905932152625 IGQQVDREPGDVAT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 IGQQVDREPGDVATPPR 17 1 H3BT22;Q9Y5N6 H3BT22 ORC6 Origin recognition complex subunit 6 1 IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR 142.23 1.3417e-16 239890000.0 9344.5 9687.2 9843.1 11902.0 11658.9 10170.4 10254.1 10262.099999999999 10105.1 10160.900000000001 12012.0 True False 10293.146760942685 10503.574341231355 10511.11195736869 12637.159508596791 10840.019085021484 10087.575634385368 10644.32538675882 10057.414365038285 9680.417788431834 9519.339039929955 10534.600150341736 0.9770799664008873 0.997054865997038 0.997770376413168 1.1995860619528924 1.0289919816909083 0.9575660670954022 1.0104157001548393 0.9547029997822963 0.9189164894993957 0.9036260421921333 1.0 13.362847936033424 -7.206327046921418 5.469484667641673 0.9640205683937412 1.0449913257486036 0.3017877970046744 0.062106992928634606 0.22737757747829784 15.101910995049431 0.00937181222172497 0.016288465556962287 6.218318362504263e-08 7.206327046921418 0.08097075735486248 IGQQVDREPGDVAT(ph)PPRK ddPTM_A549_PD325901_60min_R1 2 IGQQVDREPGDVATPPRK 18 2 H3BT22;Q9Y5N6 H3BT22 ORC6 Origin recognition complex subunit 6 1 IGQQVDREPGDVAT(1)PPRK;IGQQVDREPGDVAT(1)PPRK 148.2 2.0224e-17 31873000.0 5559.799999999999 5471.1 5714.1 5696.5 6892.2 6718.200000000001 6610.9 6569.700000000001 6381.3 6197.2 7063.799999999999 True False 6124.226803091562 5932.168797827118 6101.893187674661 6048.359867309833 6408.115648799212 6663.489206612115 6862.481417123288 6438.6621796700565 6113.116152568516 5805.907734379233 6194.9973811175505 0.9885761730518727 0.9575740606297046 0.9849710681514293 0.9763296891368073 1.03440167195732 1.0756242168757866 1.1077456526519671 1.0393325103405533 0.9867826855264523 0.9371929279705156 1.0 12.596887957141035 -6.739778232055964 23.27623997662117 1.0145404365818658 0.9760641000820705 0.19907596610706635 0.043661871802311986 176.03707803546334 189159.84013021548 0.006527846951068479 0.01357606322794934 1.8206303071458702e-07 6.739778232055964 -0.038476336499795316 IGRPMVAS(ph)PNQR ddPTM_A549_MK2206_60min_R1 1 IGRPMVASPNQR 12 1 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 IGRPMVAS(1)PNQR 42.52 0.018726 14198000.0 1825.1 1818.8 1936.6 1503.9 2308.7 1555.0 1696.9 1718.1 2403.1 2586.4 2820.1 True False 2133.132260589087 1911.369151277088 2211.2390004359554 1872.3555675126365 1969.093288316397 1719.5490678745396 2005.2047649706249 1961.645936460578 1858.8016869621447 2002.130443667188 2119.7913391995207 1.0062935068857315 0.9016779698698375 1.0431399353065416 0.883273524562884 0.9289090166110262 0.8111878919761407 0.945944408720829 0.9253957690011783 0.8768795553547589 0.9444941144175237 1.0 11.049706545338454 -2.000012987602673 0.8387955567306933 0.9296979756244615 22.77576170575654 0.12105510950467502 0.05916305549186966 1279.0218021452113 3.5281647914882224 0.010035552209867384 53303.13781300172 0.009999700953868436 2.000012987602673 21.84606373013208 IGS(ph)DPLAYEPK ddPTM_A549_MK2206_60min_R1 1 IGSDPLAYEPK 11 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 IGS(1)DPLAYEPK 134.18 5.8997999999999997e-08 10882000.0 7734.0 7412.3 6052.1 5799.2 9098.1 6801.3 6735.8 7616.6 9448.0 7378.4 7312.5 True False 9039.310121854143 7789.554409506905 6910.378784745669 7220.004260335977 7759.781542180193 7521.009051662442 7959.607670392556 8696.276374859228 7308.043085355727 5711.614315478645 5496.604435267012 1.6445262212897507 1.4171575381208066 1.2572086760341847 1.313538994003531 1.4117409454448473 1.368300946563765 1.448095413110421 1.5821179197583612 1.329555941567536 1.0391168552774324 1.0 12.424324943806237 -10.119416943326419 0.7439423814701627 1.0117576090615301 1.4174098493150074 0.6664385784487885 0.10850778609243728 0.29379662880092877 0.31871039842257065 0.061084232261643466 0.023658293604525815 7.59596677888825e-11 10.119416943326419 0.40565224025347724 IGS(ph)GRS(ph)SPVTVNQTDKEK ddPTM_A549_PD325901_60min_R1 2 IGSGRSSPVTVNQTDKEK 18 2 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 2 IGS(0.871)GRS(0.611)S(0.496)PVT(0.021)VNQT(0.001)DKEK;IGS(0.961)GRS(0.539)S(0.495)PVT(0.005)VNQTDKEK 46.578 0.007402199999999999 14103000.0 3702.7 3824.3 3769.7 3565.3 4292.0 3888.6 3858.2000000000003 4000.9 4149.4 4083.1000000000004 4878.0 True False 4078.5953782163283 4146.587182382017 4025.534511047612 3785.5204836162115 3990.544726596182 3856.9325308612188 4005.025912288051 3921.09891085467 3975.015147927191 3825.292369173797 4278.036924189731 0.9533801251584155 0.9692733503386929 0.9409770374551072 0.8848732609602703 0.9327981028008541 0.9015659750509821 0.9361831099778578 0.9165649994003581 0.9291680315919824 0.8941700216620537 1.0 12.06273321927246 -10.536538392976315 0.7721028497974284 1.0016546984915298 0.9285943384447238 0.0 0.03797922454492717 0.4027665940470115 0.4171394057882892 0.01740347155678499 0.004509388092677876 2.9071109504788513e-11 10.536538392976315 -0.07306036004680594 IGS(ph)ISR ddPTM_A549_PD325901_60min_R1 1 IGSISR 6 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 IGS(0.96)IS(0.04)R 67.98100000000001 0.054007000000000006 2574000.0 1289.7 1133.8 1021.6 1041.4 1326.0 1267.5 1194.3 955.73 1206.8 1278.6 1384.3 True False 1420.62939457304 1229.3493050714462 1090.9319193798558 1105.7249128089989 1232.8663344516629 1257.177900238286 1239.7497400460363 936.6672153943194 1156.0823927600454 1197.868977792759 1214.039875800706 1.170166996068461 1.0126103183065902 0.8985964473863299 0.9107813794664122 1.0155072819486592 1.0355326256554207 1.0211771167964097 0.7715292010293742 0.9522606430019973 0.9866800931911057 1.0 10.245600093138005 IGS(ph)LIDVNQSK ddPTM_A549_MK2206_60min_R1 1 IGSLIDVNQSK 11 0 F5H6P7;P61326-2;P61326;Q96A72 F5H6P7 MAGOHB;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 1 IGS(1)LIDVNQSK 52.693000000000005 0.030361000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IGS(ph)LIDVNQSKDPEGLR ddPTM_A549_PD325901_60min_R1 1 IGSLIDVNQSKDPEGLR 17 1 F5H6P7;P61326-2;P61326;Q96A72 F5H6P7 MAGOHB;MAGOH Protein mago nashi homolog;Protein mago nashi homolog 2 1 IGS(0.998)LIDVNQS(0.002)KDPEGLR 63.302 0.00082344 1761500.0 1469.9 1102.5 1123.7 1051.4 1763.8 1499.5 1467.5 1251.9 1406.1 1213.7 1371.2 True False 1619.1231659168113 1195.4115442240866 1199.9610393570313 1116.3425900973511 1639.9167727796696 1487.2885691576405 1523.346515546812 1226.9298724034493 1347.0065068444644 1137.0667748686622 1202.5510927529642 1.3464069640568876 0.9940629977620882 0.9978462009543365 0.9283119834365968 1.3636982101321427 1.2367778617645553 1.2667624059610312 1.0202725520748357 1.1201241385601362 0.9455455004956249 1.0 10.231882475701413 -10.226413004685103 0.6738040930496175 1.0003834073692262 1.1394677787062322 0.16774003667292825 0.14218915344503116 1.3416313175437802 1.1360101973783505 0.09614736353505045 0.030855598047697965 5.937272682327224e-11 10.226413004685103 0.13908437133700602 IGS(ph)MTGAEQALLPR ddPTM_A549_MK2206_60min_R1 1 IGSMTGAEQALLPR 14 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 IGS(0.857)MT(0.143)GAEQALLPR 50.563 0.025533 2084100.0 444.12 460.84 314.48 405.39 834.65 525.75 476.47 644.91 927.1 800.06 811.64 True False 519.0765983084901 484.2947875932117 359.0779928003202 504.7105681986484 711.8740906541693 581.384516035395 563.0384314724218 736.3279674540424 717.1133302744812 619.3258903341982 610.0873878755718 0.8508233551852354 0.7938121607129245 0.588568129642363 0.8272758595389695 1.1668395459428134 0.9529528516560142 0.9228816111623247 1.206922126382684 1.1754272330912985 1.0151429166414936 1.0 9.252872096425616 -6.633460303736066 5.196056991919565 1.0762957917536438 0.7432920803132955 0.6511438344762317 0.10551058043172909 0.09865143157270383 4.129488488206094 0.016255631273235677 0.034355626393947125 2.3256250476500796e-07 6.633460303736066 -0.33300371144034824 IGS(ph)MTGAEQALLPR ddPTM_A549_PD325901_60min_R1 4 IGSMTGAEQALLPR 14 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 IGS(1)MTGAEQALLPR;IGS(0.754)MT(0.246)GAEQALLPR;IGS(0.793)MT(0.207)GAEQALLPR;IGS(0.997)MT(0.003)GAEQALLPR 94.728 5.2703e-05 24373500.0 11630.0 10768.35 9451.400000000001 11398.669999999998 11606.900000000001 12372.14 10929.0 10536.5 13423.5 12361.1 15913.099999999999 True False 12810.669038446516 11675.83664602761 10092.828839885253 12102.73995764216 10791.671385631222 12271.385393809942 11344.909075578274 10326.34124177565 12859.35697647869 11580.618036441472 13955.889581452146 0.9179399825198054 0.8366243210712412 0.7231949479808846 0.8672137943629988 0.7732700465023542 0.8792979710959474 0.8129119257762003 0.7399271240652198 0.9214286843863551 0.82980149483502 1.0 13.768586467682939 -8.99836599587646 3.4065399991280523 0.9684505091284057 0.818151638194217 0.20280796793847233 0.07081975369281983 0.11628049874015563 2.7593603324613594 0.010607528339595534 0.01076155356913081 1.0037695203749447e-09 8.99836599587646 -0.1502988709341887 IGS(ph)PGNHK ddPTM_A549_MK2206_60min_R1 2 IGSPGNHK 8 0 Q6ZV73-2;Q6ZV73;H0YI21 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 IGS(1)PGNHK;IGS(1)PGNHK 104.22 0.00063904 117182000.0 11016.1 12377.0 10348.1 8492.2 19331.3 16483.7 14538.0 17244.6 22722.8 20866.5 21840.8 True False 12875.348362213274 13006.93643355867 11815.616183213531 10572.78938122934 16487.69137801827 18227.994193005503 17179.366417079917 19689.074859372595 17576.122080855337 16152.74315758637 16417.126584585254 0.7842632080514316 0.7922785005368383 0.7197128025014877 0.6440097374382547 1.0042982426351803 1.110303566162458 1.0464295520027458 1.1993009104199461 1.0705967326437207 0.98389587692848 1.0 14.002914020372302 -6.851925164895757 5.85792491299736 1.0536946970750516 0.7389710200992559 0.8494808574831698 0.06580664003633693 0.06163033509777118 3.2173784189043486 0.009985313743447865 0.01912758139778322 1.4062898269533247e-07 6.851925164895757 -0.31472367697579573 IGS(ph)PGNHK ddPTM_A549_PD325901_60min_R1 2 IGSPGNHK 8 0 Q6ZV73-2;Q6ZV73;H0YI21 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 IGS(1)PGNHK;IGS(1)PGNHK 92.23899999999999 0.00079623 232290000.0 13320.900000000001 12639.1 11353.900000000001 10591.8 10830.9 9927.3 9605.5 10714.8 10539.099999999999 12707.900000000001 14942.8 True False 14673.227961671719 13704.241313925306 12124.443930547133 11246.031430276884 10070.17494857656 9846.455360185822 9971.042558831283 10501.084908402014 10096.178277707484 11905.521025256216 13104.930330213669 1.119672336436792 1.045731718415161 0.9251818685822385 0.8581527064168317 0.7684264391211282 0.7513550329592085 0.7608619281128761 0.8013079538615754 0.7704106792869055 0.908476483679414 1.0 13.677822063431543 -5.758503760219917 1.9547360848756619 0.853153720003806 1.1179335131873485 0.6305906410631624 0.07420256791334676 0.27896129838788886 1.931548949163141 0.015001914086710906 0.09314976823688167 1.7437982592004773e-06 5.758503760219917 0.2647797931835425 IGS(ph)PPKTPVSNVAATSAGPSNVGTELNSVPQK ddPTM_A549_MK2206_60min_R1 1 IGSPPKTPVSNVAATSAGPSNVGTELNSVPQK 32 1 Q9HBD1;Q9HBD1-6;Q9HBD1-4 Q9HBD1 RC3H2 Roquin-2 1 IGS(0.927)PPKT(0.036)PVS(0.036)NVAATSAGPSNVGTELNSVPQK 87.75299999999999 1.8689e-09 4822700.0 480.23 450.61 593.23 673.91 1053.1 741.77 411.17 703.0 722.0 802.97 943.43 True False 561.2810835037516 473.5441242890744 677.3589343326569 839.0179802529694 898.1903850331345 820.2636090529237 485.8742667293133 802.6524028472063 558.4681527970823 621.5785193131154 709.1502936566089 0.7914839611919277 0.6677627133838262 0.9551697861393732 1.183131400717217 1.266572675873507 1.1566851433190255 0.685149919665108 1.1318509066794151 0.7875173398257221 0.8765116857077714 1.0 9.469947606992335 -5.772520911225845 23.944181995266813 0.9622397255567379 0.729623363518944 0.244889559781302 0.1736699937393768 140.78535890412041 304203.90255467774 0.02607801502173549 0.08229256013616591 1.6884145605762425e-06 5.772520911225845 -0.2326163620377939 IGS(ph)PPKTPVSNVAATSAGPSNVGTELNSVPQK ddPTM_A549_PD325901_60min_R1 1 IGSPPKTPVSNVAATSAGPSNVGTELNSVPQK 32 1 Q9HBD1;Q9HBD1-6;Q9HBD1-4 Q9HBD1 RC3H2 Roquin-2 1 IGS(0.764)PPKT(0.109)PVS(0.125)NVAAT(0.001)S(0.001)AGPSNVGTELNSVPQK 89.585 1.5945e-09 6413000.0 510.62 502.3 680.53 1126.2 1141.3 868.89 860.78 1068.9 1072.6 968.92 935.57 True False 562.4577665014235 544.6305838220034 726.7148581593318 1195.7628162142255 1061.1390252712538 861.8140479195612 893.53745393689 1047.579950964172 1027.5223520669745 907.7422258430787 820.5008210668684 0.6855054279776094 0.6637782313414865 0.8856966860976568 1.457357245126723 1.2932821004267758 1.0503512315794816 1.0890146980901916 1.2767567369427377 1.2523111807870262 1.1063270170318336 1.0 9.680360967204763 -6.016884129145079 5.851240969682722 1.15720031333259 0.6938808119249555 0.719183051462025 0.1267856504950032 0.07604127380053367 9.500726948641951 0.020543537626022578 0.05943943580596277 9.618688731752415e-07 6.016884129145079 -0.46331950140763456 IGS(ph)TIFGER ddPTM_A549_MK2206_60min_R1 1 IGSTIFGER 9 0 O94903 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein 1 IGS(0.979)T(0.021)IFGER 52.278 0.024284 498660.0 262.25 297.69 283.0 339.98 286.66 218.24 360.94 313.84 504.52 341.22 390.8 True False 306.5113886030836 312.8411494632047 323.13365543910766 423.275115262282 244.49269373620584 241.33401194401253 426.51812591696455 358.3277810946905 390.24702555288667 264.13816501241786 293.75357446869714 1.0434303281499167 1.0649781880238587 1.1000160798844725 1.4409190289100189 0.8323054253158011 0.8215525968679896 1.451958930843291 1.219824411474096 1.3284843469861234 0.8991828116139736 1.0 8.198462596641768 -7.753726355032069 24.9998149381879 1.185179381787451 1.0612647804175688 0.08791219905666237 0.205569871585931 389.03541753394234 1260955.587999766 0.03215226030096508 0.04719285933676938 1.763086601188904e-08 7.753726355032069 -0.1239146013698822 IGS(ph)TIFGER ddPTM_A549_PD325901_60min_R1 2 IGSTIFGER 9 0 O94903 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein 1 IGS(0.982)T(0.018)IFGER;IGS(0.967)T(0.033)IFGER 68.893 0.004256 3326200.0 883.09 853.9300000000001 796.69 769.6600000000001 995.01 1048.78 843.44 993.34 909.98 1052.47 1042.92 True False 972.7406467035016 925.8936779675953 850.7581742861557 817.2001501753155 925.1239301981512 1040.2390834019006 875.5375707480775 973.5270544398452 871.7367051406916 986.0168645843465 914.6474516145859 1.0635143026817233 1.0122956952792652 0.9301487395874233 0.8934591669530692 1.0114541166272006 1.1373115199365762 0.9572404856128234 1.0643740959659613 0.9530849329999818 1.0780294230785594 1.0 9.837071957414265 -5.375810738199741 3.9610338001690377 0.9863460832177225 1.0632710732601127 0.014400803893975689 0.0687405178244429 0.38573163533010163 9.44276847509896 0.008593285042108177 0.06431288810543107 4.209100173875968e-06 5.375810738199741 0.07692499004239017 IGS(ph)VTSR ddPTM_A549_MK2206_60min_R1 2 IGSVTSR 7 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 IGS(0.917)VT(0.083)S(0.001)R;IGS(0.585)VT(0.398)S(0.017)R 97.635 0.011616 51172000.0 3439.5 4798.2 3553.3 2901.6000000000004 4619.3 3749.3 2710.0 3208.3999999999996 4962.7 5211.0 4612.3 True False 4020.0035122985914 5042.407885230769 4057.2113705716656 3612.492130257775 3939.8070891497073 4146.048437416082 3202.371921191815 3663.2005253129114 3838.656373803438 4033.8314808033247 3466.9386169958325 1.1595254362426526 1.4544266404116812 1.1702576303722723 1.0419832968915 1.1363936672647594 1.1958816972100623 0.9236886703136182 1.0566095711516068 1.1072178650597817 1.1635139604227305 1.0 11.75944657815707 -5.990254542402899 5.915387385168627 1.0603160643416083 1.3103306710870786 0.4453196559865693 0.09693126627103564 0.08304728765809304 10.990244567804082 0.012279975861473549 0.03736018059486169 1.0226934103127498e-06 5.990254542402899 0.25001460674547027 IGS(ph)VTSR ddPTM_A549_PD325901_60min_R1 2 IGSVTSR 7 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 IGS(0.831)VT(0.156)S(0.013)R;IGS(0.9)VT(0.091)S(0.009)R 97.635 0.011616 90233000.0 5026.4 6345.7 6830.0 5977.4 7420.8 5951.3 6374.8 7266.700000000001 6491.299999999999 6314.6 8061.900000000001 True False 5536.676427759889 6880.474409236089 7293.524872126484 6346.610422339642 6899.588608370209 5902.834585947226 6617.396502424408 7121.75996788413 6218.493235103814 5915.895078343623 7070.337408594746 0.7830851779477271 0.9731465433137804 1.0315667344617006 0.8976389747149356 0.975849978529034 0.8348731106908283 0.9359378654801197 1.0072729993376093 0.8795185966011431 0.8367203340468906 1.0 12.787563349214622 -11.064631428298117 1.3613206856797495 1.0002008325212153 0.9236852460727569 0.0 0.08513237407496416 0.7026747551807423 2.3134385726438005 0.049273117192375995 0.01078594194148801 8.617247599249952e-12 11.064631428298117 -0.07651558644845835 IGSIS(ph)R ddPTM_A549_MK2206_60min_R1 2 IGSISR 6 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 IGSIS(1)R;IGSIS(1)R 72.492 0.048132999999999995 101654000.0 7616.4 9200.7 7860.5 7858.7 10824.6 7595.1 7346.5 8309.7 11344.5 11001.099999999999 11386.2 True False 8901.862116898092 9668.976330632893 8975.237097452671 9784.081852790443 9232.315679260913 8398.808440780653 8681.263955363713 9487.625422388961 8774.988863443907 8515.943869404231 8558.692296866633 1.040096057683613 1.129725896814019 1.0486692109188849 1.1431748581932815 1.0787063442672074 0.9813191255696253 1.0143213068358532 1.1085368060097702 1.0252721512907363 0.9950052617877088 1.0 13.063174665289855 -7.117063899542907 6.322307440879037 1.018654363981713 1.0926324023452507 0.3938981016724271 0.04165734772855477 0.17522245439700226 8.522583853280395 0.0059234419463601706 0.010334357333140556 7.637234055279593e-08 7.117063899542907 0.07397803836353778 IGSIS(ph)R ddPTM_A549_PD325901_60min_R1 2 IGSISR 6 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 IGSIS(1)R;IGSIS(1)R 78.324 0.044098000000000005 242400000.0 10919.3 11572.099999999999 11809.2 12196.8 12799.099999999999 9635.2 11576.8 11409.7 10664.900000000001 10967.3 10804.599999999999 True False 12027.819297636199 12547.321479288477 12610.64332648844 12950.168635057418 11900.13537049795 9556.734125740379 12017.361459068028 11182.124582763507 10216.691341188784 10274.822806308875 9475.702696002523 1.2693327010682096 1.324157361393553 1.3308399103539246 1.3666710586562254 1.2558578241926281 1.008551495581646 1.2682290532540392 1.1800839411604656 1.0781988068809776 1.0843335988837508 1.0 13.210017218810991 -7.921017087015086 0.37632586971222937 0.9985476559355166 1.3586547981998676 0.6004102169468011 0.08042455632715068 0.5197981875184323 0.1703957696351425 0.035304048964392924 0.06781443789691627 1.1994521106098697e-08 7.921017087015086 0.3601071422643509 IGSPPKT(ph)PVSNVAATSAGPSNVGTELNSVPQK ddPTM_A549_PD325901_60min_R1 1 IGSPPKTPVSNVAATSAGPSNVGTELNSVPQK 32 1 Q9HBD1;Q9HBD1-6;Q9HBD1-4 Q9HBD1 RC3H2 Roquin-2 1 IGS(0.285)PPKT(0.517)PVS(0.198)NVAATSAGPSNVGTELNSVPQK 94.406 1.2388e-09 8044300.0 736.84 886.94 1191.1 1000.5 1137.6 1135.9 668.72 1013.5 1067.1 1210.4 1402.8 True False 811.643454367062 961.6855465162005 1271.9352086661563 1062.298612699638 1057.6989005069468 1126.649607006444 694.1685055376249 993.2849474246304 1022.2534979402095 1133.9751374318432 1230.2644930818676 0.6597308618847145 0.7816900771533568 1.033871347030346 0.8634717320326236 0.8597329325967652 0.9157783658245199 0.5642433065744276 0.8073751238129349 0.830921727554226 0.9217328012053609 1.0 10.264752796841725 -10.365146038610142 0.8540900077578661 0.9944024042249757 0.8181689449319959 0.17652302296303568 0.11914832422925539 0.6557450412000617 0.9042005535538362 0.06660480200812713 0.022911249774948055 4.313739958871777e-11 10.365146038610142 -0.17623345929297984 IGSVAPDTINNHVKT(ph)CR ddPTM_A549_MK2206_60min_R1 2 IGSVAPDTINNHVKTCR 17 1 Q9UHY1 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 IGSVAPDTINNHVKT(1)CR;IGSVAPDTINNHVKT(1)CR 129.15 2.9668e-12 11692400.0 1560.4 1674.4 1474.28 1538.9699999999998 2009.57 1456.62 1491.5700000000002 1550.65 2498.8999999999996 2220.5 2558.0 True False 1823.7573718827512 1759.619808059356 1683.3550725822179 1916.017719086987 1713.9649150612825 1610.7585615738983 1762.5689618051927 1770.4593861664596 1932.9031399233104 1718.8875077957741 1922.7780027915237 0.9485012670391421 0.9151445489311342 0.8754807211952148 0.9964841059681763 0.8914003138026945 0.8377246667245881 0.9166783472903598 0.9207820058249443 1.0052658898308005 0.8939604599700341 1.0 10.908976488442383 -8.73042381399062 5.129659003733902 1.0026490718232401 0.9107518983520468 0.07877801760612557 0.05013422169093428 0.10241193618050722 6.717536029536252 0.006452472718502174 0.007191405029315177 1.860270872189347e-09 8.73042381399062 -0.0918971734711933 IGSVAPDTINNHVKT(ph)CR ddPTM_A549_PD325901_60min_R1 2 IGSVAPDTINNHVKTCR 17 1 Q9UHY1 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 IGSVAPDT(0.001)INNHVKT(0.999)CR;IGSVAPDTINNHVKT(1)CR 113.54 1.0922999999999998e-09 18356200.0 2402.3 2981.1000000000004 3177.1000000000004 2562.6000000000004 3169.9 3345.9 2706.7 3066.2 2702.3 3396.2 3249.3999999999996 True False 2646.179727520212 3232.327759171362 3392.7171114543244 2720.8859819131376 2947.2571595613317 3318.6520997296097 2809.704949663073 3005.0422356126332 2588.731728501387 3181.763352400883 2849.7443996437273 0.9285673928690009 1.1342518155577268 1.1905338288860148 0.9547824647899301 1.0342180723049392 1.1645437745730827 0.9859498101002813 1.0544953561408248 0.9084083922842442 1.1165083271323086 1.0 11.476616810990999 -8.709151942516343 9.959940448358104 0.9567707924553406 1.0603162342792172 0.0 0.09426696857024408 0.42525119543527923 78.11391829497016 0.013787603263304913 0.015621532758402923 1.9536558290473136e-09 8.709151942516343 0.1035454418238766 IGSVAPDTINNHVKT(ph)CREEQK ddPTM_A549_MK2206_60min_R1 1 IGSVAPDTINNHVKTCREEQK 21 2 Q9UHY1 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 IGSVAPDTINNHVKT(1)CREEQK 84.68 3.3048e-05 7819200.0 1382.6 1124.8 1264.0 975.84 1627.3 1069.0 1242.4 1214.0 1457.8 1781.7 1864.5 True False 1615.949078675399 1182.047515590757 1443.2542066255542 1214.9208438071225 1387.9263256712745 1182.1208704552294 1468.1279981139162 1386.0882177190736 1127.6106276282362 1379.2127325556094 1401.4931924178238 1.1530195704251698 0.8434200907901064 1.0297975148460659 0.866876022216825 0.9903197055683559 0.8434724312972663 1.0475455792840032 0.9890081701558793 0.8045780270133944 0.9841023417147131 1.0 10.452749021334386 -5.248478752714703 24.244790736396368 0.9231366015477896 1.153019796922764 0.338286962143138 0.08271203019225488 1181.5752829644944 2210254.5602655252 0.012131275630362837 0.2978629577407373 5.6431454901552805e-06 5.248478752714703 0.22988319537497437 IGSVAPDTINNHVKT(ph)CREEQK ddPTM_A549_PD325901_60min_R1 2 IGSVAPDTINNHVKTCREEQK 21 2 Q9UHY1 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 IGSVAPDTINNHVKT(1)CREEQK;IGSVAPDT(0.049)INNHVKT(0.951)CREEQK 129.93 1.1867e-17 10737300.0 3079.6 2875.7 3075.4 3497.8 3922.9 3259.6 3606.5 3491.6000000000004 3512.0 3524.5 4147.0 True False 3392.238724918305 3118.045331270029 3284.1151378825434 3713.8511619198325 3647.369037270306 3233.0548983169356 3743.7473310525243 3421.9572988927907 3364.4028533089836 3301.9624685050685 3636.9452899989356 0.9327164569251185 0.8573253328402257 0.9029872258220042 1.0211457324179103 1.0028660720577882 0.8889479055974147 1.029365864080298 0.9408877577297271 0.9250628164686987 0.9078944568082944 1.0 11.828511508382237 -2.000058333362489 0.00863156480154282 1.7908978719615656 1.545309446217103e-06 0.0 0.05548286845136846 20268.2904703672 13.161579215544437 1196.7623765026042 1556.3691853280984 0.009998656914893047 2.000058333362489 -1.7908963266521194 IGT(ph)PTRPCPLPPGK ddPTM_A549_PD325901_60min_R1 1 IGTPTRPCPLPPGK 14 1 B1AUU8;P42566-2;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 IGT(0.963)PT(0.037)RPCPLPPGK 58.159 0.004225199999999999 5445900.0 1911.2 1945.2 2627.2 2024.6 2059.9 2335.1 2093.3 2212.7 2288.5 2300.4 2558.0 True False 2105.223617048922 2109.1288306799934 2805.497590636996 2149.654943799786 1915.219730269216 2316.083719799938 2172.9616769977124 2168.5659626704296 2192.3223034731236 2155.152351411279 2243.382216498017 0.9384150420587872 0.9401558125803471 1.2505660292771943 0.9582205510906912 0.8537197612535807 1.0324070961993317 0.9686096559995768 0.9666502420865323 0.9772397620657797 0.9606710508633401 1.0 11.131459725357912 IGT(ph)PTRPCPLPPGKR ddPTM_A549_PD325901_60min_R1 2 IGTPTRPCPLPPGKR 15 2 B1AUU8;P42566-2;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 IGT(0.714)PT(0.286)RPCPLPPGKR;IGT(0.969)PT(0.031)RPCPLPPGKR 44.662 0.018206 12604800.0 4961.2 4635.6 5384.0 4539.6 4514.6 5345.4 4508.4 5178.8 4994.5 5415.700000000001 5681.2 True False 5464.857371757597 5026.258280639616 5749.390616622103 4820.000781820367 4197.51007052449 5301.86883466172 4679.969629091143 5075.504771309995 4784.5985338416085 5073.751777750858 4982.448416094034 1.096821665851133 1.0087928385578604 1.1539287788812294 0.9673960228571684 0.8424593131693892 1.064109127058077 0.9392911352527324 1.0186768326422357 0.9602906310854435 1.0183249988824574 1.0 12.282639153403176 -6.288709867226328 24.621596873341886 0.9758136566605763 1.0787422763561652 0.38332627925946183 0.06203183512772854 434.4042538339343 392208.1134971947 0.007871420528667527 0.018296227629144447 5.143871759533989e-07 6.288709867226328 0.10292861969558886 IGT(ph)PVKVR ddPTM_A549_PD325901_60min_R1 2 IGTPVKVR 8 1 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4 A0A0A0MSM0 HSPH1 Heat shock protein 105 kDa 1 IGT(1)PVKVR;IGT(1)PVKVR 43.512 0.027160000000000004 7225400.0 2043.1 1868.03 2395.8999999999996 2612.8999999999996 2948.3 3186.3999999999996 2793.7 2984.6 2606.0 2643.8 3329.5 True False 2250.5140079492744 2025.4554439518552 2558.5001817171064 2774.2928986735483 2741.2215790828322 3160.451014847553 2900.0157822712986 2925.0698116265944 2496.478882609115 2476.870016806269 2919.992607439465 0.7707259265710078 0.693650880756158 0.8762009106456778 0.9501027131388253 0.9387768900848703 1.0823489781431144 0.9931586041973977 1.0017387729592857 0.8549606859444319 0.8482453039421326 1.0 11.511749001293433 -5.936063142656394 3.483974909518184 0.9513209780144426 0.7325645778771002 0.6334736861213115 0.06575503734799325 0.12090647910033228 2.9572368103011963 0.01006926685114853 0.03506149985922816 1.1586088922102078e-06 5.936063142656394 -0.21875640013734243 IGTLHTS(ph)PDLK ddPTM_A549_MK2206_60min_R1 2 IGTLHTSPDLK 11 0 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 IGTLHT(0.29)S(0.71)PDLK;IGT(0.001)LHT(0.269)S(0.73)PDLK 82.85 0.00020282 52955000.0 2529.6 3642.4 2945.9 2904.3999999999996 4468.1 2790.7 2325.85 3010.0 4524.299999999999 4647.8 4282.5 True False 2956.5346372177696 3827.78260205172 3363.6729171663137 3615.978130383468 3810.8484088562795 3086.0100216832634 2748.426838709956 3436.676717738398 3499.5532738224942 3597.8587519627085 3219.037059012783 0.91845312216582 1.1891079636174264 1.0449314051071805 1.123310500654012 1.1838473242134695 0.9586748972159033 0.8538040377680044 1.0676101749485174 1.0871428969804218 1.1176816812000614 1.0 11.652413470532107 -7.272559340844264 24.93108678628755 1.0235469541226665 1.096461159754263 0.1372834664241106 0.09520585464058423 1169.4083702206694 2621824.402169434 0.013811621479650446 0.022200134263072577 5.3387632114804705e-08 7.272559340844264 0.07291420563159656 IGTLHTS(ph)PDLK ddPTM_A549_PD325901_60min_R1 3 IGTLHTSPDLK 11 0 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 IGTLHT(0.423)S(0.577)PDLK;IGTLHT(0.019)S(0.981)PDLK;IGTLHT(0.433)S(0.567)PDLK 114.86 2.2026e-05 98210700.0 7981.6 8146.400000000001 6939.4 7177.699999999999 8001.6 7653.0 7315.8 7792.0 7955.0 8278.3 9088.1 True False 8791.886156256633 8832.925717793289 7410.349414002123 7621.050227260556 7439.595220021434 7590.676505344066 7594.206772359368 7636.5824472942495 7620.679014257681 7755.606725216485 7970.321314212517 1.103078007730895 1.1082270550426359 0.9297428700632353 0.9561785437270707 0.9334122084583086 0.9523676908493669 0.9528106174110611 0.9581273007998873 0.9561319693183058 0.9730607361320356 1.0 12.96042217061898 -5.752603025252366 24.982655285275364 0.9668531580709314 1.105652616618515 0.8901813481386336 0.019904398233774514 55.73726657583501 157579.9696045344 0.0035794287298231164 0.013453757600581309 1.7676528375906697e-06 5.752603025252366 0.13879945854758358 IGTLQDRPPS(ph)PFREPPGSER ddPTM_A549_MK2206_60min_R1 3 IGTLQDRPPSPFREPPGSER 20 2 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 IGTLQDRPPS(1)PFREPPGSER;IGT(0.001)LQDRPPS(0.955)PFREPPGS(0.045)ER;IGTLQDRPPS(1)PFREPPGSER 178.35 1.2268e-35 58247800.0 3792.4999999999995 3974.39 4109.21 3851.97 5384.099999999999 3891.8799999999997 3544.49 4259.17 5932.7 5900.0 5709.200000000001 True False 4432.581282277197 4176.669475007778 4691.957767727685 4795.702822921502 4592.106022274139 4303.716158379142 4188.477952378291 4862.9203906610755 4588.9529225751385 4567.18590227204 4291.448074095921 1.0328870828085246 0.9732541097768441 1.0933274006154996 1.1175022370349459 1.0700597893734407 1.0028587283526216 0.976005739801635 1.1331653807055668 1.069325049107554 1.0642528636989763 1.0 12.067248826747583 -7.211030188603507 24.993857676331007 1.035273107882143 1.058065309888348 0.01777727603201862 0.05234212599335848 1192.3827776520868 591206.0709753908 0.008315449225824317 0.014402780013409654 6.151341121268486e-08 7.211030188603507 0.022792202006204798 IGTLQDRPPS(ph)PFREPPGSER ddPTM_A549_PD325901_60min_R1 2 IGTLQDRPPSPFREPPGSER 20 2 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 IGTLQDRPPS(1)PFREPPGSER;IGTLQDRPPS(1)PFREPPGSER 158.67 1.6538e-27 74169000.0 3718.0 2984.8 3198.1 3371.5 3649.7 3120.5 3253.5 3211.4 3795.7 3337.6 3545.8 True False 4095.448622953063 3236.3395711565126 3415.142297737586 3579.7498977679434 3393.3576627814746 3095.0876825984783 3377.3137228835108 3147.3461077054385 3636.1799289023097 3126.863366401622 3109.689078678135 1.3169961752877088 1.0407277027619153 1.0982262892949068 1.1511600700895863 1.0912208831578498 0.9953045479113096 1.0860615442361645 1.0121095801138134 1.169306588827194 1.005522831154164 1.0 11.602554624801497 -14.999955499766655 0.012739131487152578 6.37681533493523e-08 1.9940794992198863 0.25213272886786464 0.0800664090204955 8828.362572298049 8.753426327696454 825.2511483511231 567.6108776392849 1.000102470823712e-15 14.999955499766655 1.9940794354517328 IGVLDEGK ddPTM_A549_MK2206_60min_R1 2 IGVLDEGK 8 0 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 ; 121.62 0.0032593000000000006 8823100.0 3887.1000000000004 3950.2 3480.0 3938.2 4729.3 3858.9 2924.6 3980.8 4446.0 5070.5 5223.6 False True 4543.1474495292505 4151.248307331621 3973.5163283678253 4903.059176792516 4033.626234865827 4267.246236669492 3455.96196336442 4545.090590688706 3438.9880988030873 3925.0705283848124 3926.435955974122 1.1570664848402261 1.05725608513121 1.0119906125864782 1.2487302051450628 1.0272996376595964 1.0867988895060985 0.8801778513937379 1.1575613715978972 0.8758548814658809 0.9996522475841655 1.0 11.93900465018244 -7.682647924682138 8.266429017269092 0.9554373390478539 1.0966586897981967 0.2519617068231337 0.09398320763441512 0.22984806768888438 21.454260343255505 0.014309498187320396 0.021227368005486476 2.0765962973640662e-08 7.682647924682138 0.1412213507503428 IGVLDEGK ddPTM_A549_PD325901_60min_R1 2 IGVLDEGK 8 0 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 ; 106.36 0.0052974 19356000.0 4655.9 4880.799999999999 4916.0 5152.6 5962.8 5412.7 5671.7 5414.5 5844.8 4863.0 5773.4 False True 5128.563540507572 5292.122145169091 5249.629322309485 5470.864399596356 5543.993498543272 5368.620765774967 5887.539647173327 5306.503549906919 5599.163381839506 4555.9493500752305 5063.308400597986 1.0128878461959534 1.0451905604928353 1.0367982565884184 1.080492035395323 1.0949349831996242 1.0602989865560872 1.1627851162449432 1.0480308782455776 1.105830998004829 0.8997969291258585 1.0 12.305864644569105 -5.5821201875171305 1.534078154990161 1.0640459884920288 1.012276754580727 0.020713151665535667 0.0636669222462006 1.3282318389481305 4.376043503280927 0.007179434848643075 0.08604415281634228 2.6174585473043893e-06 5.5821201875171305 -0.05176923391130184 IGVPS(ph)ATEIIK ddPTM_A549_PD325901_60min_R1 2 IGVPSATEIIK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 IGVPS(0.919)AT(0.081)EIIK;IGVPS(0.983)AT(0.017)EIIK 74.944 0.0013635 1718480.0 1842.6100000000001 1750.05 1675.08 1897.21 2148.8 2251.5 2377.1 2098.35 2204.1000000000004 2196.0 2109.2 True False 2029.6704107422127 1897.5328553010095 1788.7610018743233 2014.3963528234674 1997.8757009575659 2233.164530482447 2467.5618412990325 2056.4967631262693 2111.4693419642163 2057.344185228296 1849.781771320414 1.0972485739728046 1.0258144418552193 0.9670119089764125 1.0889913524153436 1.0800602167959732 1.207258372369172 1.3339745690853217 1.1117510157202477 1.141469428827274 1.1122091357618469 1.0 10.853139362968745 -6.467728947651132 11.280927614224376 1.1031086720723045 1.0292824780840437 0.15880013900222278 0.08813574587048253 2.011386582761595 407.64215816258445 0.014940496589673244 0.03469176349448388 3.4062071194700976e-07 6.467728947651132 -0.07382619398826074 IGVPSATEIIK ddPTM_A549_PD325901_60min_R1 1 IGVPSATEIIK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 79.97399999999999 0.0025367 1769100.0 3734.6 3794.4 4734.8 4306.6 4178.7 4050.1 4272.9 4669.7 4811.9 4109.6 5082.6 False True 4113.733842732788 4114.167404447958 5056.1320006653705 4572.6089010017595 3885.2025277324005 4017.1173284063775 4435.507547720596 4576.559170191215 4609.672576832999 3850.1191546512787 4457.472421255989 0.9228848670192455 0.9229821332890497 1.1343047186460655 1.0258299926201964 0.871615606460143 0.9012096876360411 0.9950723478555582 1.0267162054368182 1.034144946102465 0.8637449188224983 1.0 12.122010156468543 -7.995223767838063 24.934959910622496 1.0170606264698747 0.9661456467193834 0.0 0.08141295476086942 240.73242448656816 1256766.6872794523 0.011057891330318804 0.015249050562050783 1.0110583777741215e-08 7.995223767838063 -0.05091497975049131 IHAGPITK ddPTM_A549_PD325901_60min_R1 1 IHAGPITK 8 0 A0A087X2I1;P62333 A0A087X2I1 PSMC6 26S protease regulatory subunit 10B 0 60.973 0.05585 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IHDLEDDLEMSSDAS(ph)DASGEEGGR ddPTM_A549_PD325901_60min_R1 1 IHDLEDDLEMSSDASDASGEEGGR 24 0 P35269;M0QXD6;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 IHDLEDDLEMS(0.299)S(0.299)DAS(0.339)DAS(0.063)GEEGGR 41.482 0.019214 1284900.0 460.44 397.88 474.19 530.27 459.54 628.93 283.91 539.42 430.56 496.16 716.51 True False 507.18352984198697 431.41074395998163 506.3713849361134 563.0235735694525 427.2634957269359 623.8082026010767 294.7143504115132 528.6608449331961 412.4650605127326 464.8323729248048 628.3838123311159 0.8071237990050824 0.6865401932611486 0.8058313645248547 0.8959867560572631 0.6799403284147568 0.9927184474834495 0.4690037277029959 0.8413024564907594 0.656390334089942 0.739726841785462 1.0 9.295502205909019 -10.93498917630397 1.1721371566021253 1.0010608295273014 0.7519093016545003 0.0 0.15171802069483034 0.4338471002183005 1.0517047379913227 0.08775334821993204 0.020239227377747516 1.1614775603822117e-11 10.93498917630397 -0.24915152787280104 IHEKDPNSATATAPPS(ph)PLKR ddPTM_A549_MK2206_60min_R1 2 IHEKDPNSATATAPPSPLKR 20 2 Q92766;Q92766-2;Q92766-5;Q92766-3;C9JU34;Q92766-6 Q92766 RREB1 Ras-responsive element-binding protein 1 1 IHEKDPNS(0.002)AT(0.002)AT(0.004)APPS(0.993)PLKR;IHEKDPNSATAT(0.001)APPS(0.999)PLKR 83.602 2.6843e-05 9026700.0 1996.69 2341.42 2849.35 1880.1299999999999 3068.35 2283.54 2771.04 2258.6 3818.3 4047.2999999999997 4104.6 True False 2333.682457616362 2460.5882769865852 3253.430675354845 2340.7619344022437 2616.999779618666 2525.182687108828 3274.5020990772573 2578.7634666724043 2953.461146572162 3133.012119028073 3085.3145388030066 0.7563839693705099 0.797516183857613 1.0544891402278425 0.7586785415111604 0.8482116642259656 0.8184522697282299 1.0613187271167654 0.8358186610279527 0.9572641976782053 1.015459551895014 1.0 11.591201860078765 -2.000000732643774 0.09950355161016386 1.0763998793551413 0.27458824498153483 0.31408547770579165 0.09378360193481626 96.88282916703182 0.6623709226650576 0.5958517769685211 10.649356692819111 0.009999983130267903 2.000000732643774 -0.8018116343736064 IHEKDPNSATATAPPS(ph)PLKR ddPTM_A549_PD325901_60min_R1 3 IHEKDPNSATATAPPSPLKR 20 2 Q92766;Q92766-2;Q92766-5;Q92766-3;C9JU34;Q92766-6 Q92766 RREB1 Ras-responsive element-binding protein 1 1 IHEKDPNSATATAPPS(1)PLKR;IHEKDPNSATATAPPS(1)PLKR;IHEKDPNSATAT(0.002)APPS(0.998)PLKR 108.94 1.4204e-10 31574600.0 5351.62 5592.1 5932.77 6918.5 8062.9 6931.0 6678.26 6421.7 7192.200000000001 6781.6 7663.2 True False 5894.912522745579 6063.365892476657 6335.4034488441885 7345.84003194647 7496.589719494956 6874.556233965725 6932.404838784098 6293.614155773806 6889.93684554922 6353.408618644907 6720.674981027211 0.8771310232063297 0.9021959713263669 0.9426736848202505 1.0930211701479584 1.1154519063424715 1.0228966961462842 1.031504254908117 0.9364556645784807 1.0251852477615482 0.9453527564687899 1.0 12.714390419880162 -6.024281152945726 4.842564542971089 1.0207932886324886 0.895069898580077 0.5170005678858162 0.05048383887166216 0.10614926528962021 6.571297635813166 0.006666717679519031 0.01962496588185459 9.456247859350919e-07 6.024281152945726 -0.12572339005241162 IHFPLATYAPVISAEK ddPTM_A549_MK2206_60min_R1 2 IHFPLATYAPVISAEK 16 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2;C9JDS9;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1B;TUBA1A;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ; 133.14 3.6266e-10 17666000.0 4391.7 3965.0 3115.4 3665.7 5891.2 4454.8 4555.0 5173.200000000001 6632.7 6367.3 6258.0 False True 5132.911593243704 4166.801564115712 3557.2105659187114 4563.796664559527 5024.61228402545 4926.203979143084 5382.584539124987 5906.516942260555 5130.404040245444 4928.922507718093 4703.9658879864555 1.0911880986111615 0.8858060758385562 0.7562152129979378 0.9702019047831726 1.068165119321528 1.047244834773187 1.1442652152031263 1.2556462106464923 1.0906550265060546 1.0478227574536962 1.0 12.199661882801667 -6.622544505689078 4.115545696633384 1.0695991119509431 0.9023291054337294 0.39914082993382916 0.09738615786182386 0.19232012671184368 6.003453868934637 0.014979735470607467 0.03234636993943623 2.3848193910958377e-07 6.622544505689078 -0.1672700065172138 IHFPLATYAPVISAEK ddPTM_A549_PD325901_60min_R1 2 IHFPLATYAPVISAEK 16 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2;C9JDS9;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1B;TUBA1A;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ; 132.05 4.1579000000000007e-10 43120000.0 8075.599999999999 6777.0 7122.0 7808.400000000001 8302.599999999999 7998.4 6395.8 7220.700000000001 9167.3 8138.700000000001 9098.400000000001 False True 8895.428967057489 7348.121573883566 7605.34174806512 8290.707133836933 7719.45401841506 7933.263682261069 6639.195668916054 7076.6774739704315 8782.030261144484 7624.821093040767 7979.3544795096 1.1148055885849288 0.9208917328780174 0.953127445032688 1.0390197797487082 0.9674283851203821 0.9942237436164931 0.8320467132980524 0.8868734296919409 1.100594074833509 0.9555686631820595 1.0 12.962056323480713 -8.770096016296824 24.99951756685928 1.0475027539027963 0.9610662728488578 0.05677994521543939 0.0787442154062858 219.73786762882145 634579.4049427721 0.013460080060317167 0.014438040233217628 1.6978682365867497e-09 8.770096016296824 -0.08643648105393853 IHFS(ph)PSEPK ddPTM_A549_MK2206_60min_R1 2 IHFSPSEPK 9 0 Q8IZT6;Q8IZT6-2 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 IHFS(0.806)PS(0.194)EPK;IHFS(0.985)PS(0.015)EPK 107.06 0.00015415 12149300.0 1186.23 1306.3400000000001 1400.03 1003.45 1750.79 1612.6799999999998 1286.23 1113.24 1921.1 2204.24 2700.8 True False 1386.4366234609563 1372.8271261707234 1598.5753060933346 1249.295295046583 1493.2511102574883 1783.332727189654 1519.921341769206 1271.0451791545163 1485.9739173663097 1706.3006530888342 2030.1168217120187 0.6829344048741786 0.6762306048048033 0.7874302054919379 0.615380987776378 0.7355493507995339 0.8784384761098383 0.7486866398591981 0.6260945998578695 0.731964733001509 0.8404938252025778 1.0 10.987347033380567 -10.566348363405007 0.6603100164917541 1.02183734255096 0.7184293332483216 0.4091792844391098 0.08421711814673787 0.4158362621143576 0.2919917439971934 0.07019304010254615 0.015142010703282652 2.7142611877443158e-11 10.566348363405007 -0.30340800930263834 IHFS(ph)PSEPK ddPTM_A549_PD325901_60min_R1 2 IHFSPSEPK 9 0 Q8IZT6;Q8IZT6-2 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 IHFS(0.983)PS(0.017)EPK;IHFS(0.896)PS(0.104)EPK 106.29 0.00016386 15482000.0 3102.4 2790.1 2956.4 3188.0 3416.3999999999996 2776.6 3457.8 2966.3 3480.5 3566.0 3424.2 True False 3417.353364133832 3025.231518856803 3157.0390822774116 3384.9155195266835 3176.4438499401654 2753.988290178797 3589.388471180763 2907.134819482666 3334.226688764784 3340.842151422631 3003.045107792222 1.1379627150010414 1.007387971298537 1.0512792745222541 1.1271610641956706 1.0577409715551767 0.9170652425542396 1.1952496024342467 0.9680623217877445 1.1102819202126604 1.1124848383908394 1.0 11.552210429986518 -6.990269884324767 24.725830566994002 1.0472864830471704 1.075933893260859 0.029957963495674145 0.07825400218346101 652.385732990144 1657807.8740872748 0.010780041940897432 0.0203535840949501 1.0226572832010355e-07 6.990269884324767 0.028647410213688662 IHGS(ph)PLQK ddPTM_A549_PD325901_60min_R1 1 IHGSPLQK 8 0 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 1 IHGS(1)PLQK 43.635 0.020713 4587200.0 1569.8 1846.6 2019.2 1569.7 1960.3 1974.9 1826.9 1487.3 2098.7 1824.8 1835.2 True False 1729.1649403743195 2002.2194626432627 2156.235054435986 1666.6568039526446 1822.6152906678683 1958.8170691760085 1896.4236792180382 1457.634634735721 2010.4989374258441 1709.5818165776832 1609.4820342913056 1.0743611320493636 1.2440147948124745 1.3397074390988335 1.0355237079030302 1.1324235075854143 1.2170481107846125 1.1782819806703093 0.9056544923644042 1.2491589807096641 1.0621937866678046 1.0 10.652380757604737 -11.03958060545632 1.277276845248884 0.9981849717364607 1.1634511074555058 0.13424408653338793 0.11393465836291539 0.5820439444543403 1.6610026561570836 0.08502874552459982 0.018151108733106113 9.128919859742784e-12 11.03958060545632 0.16526613571904514 IHLGS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.5)S(0.5)PK 95.50200000000001 0.00077109 11543000.0 2316.9 2230.4 2271.8 1754.9 2825.9 2344.2 2380.5 2638.3 4040.4 3477.0 3372.1 True False 2707.9360772334962 2343.9178331913454 2593.9754008005807 2184.8505787804547 2410.2138534470937 2592.261688045978 2813.0060363088983 3012.2871044548874 3125.255851192981 2691.543285118624 2534.7145047745475 1.0683396777556833 0.9247265633964671 1.0233797123559303 0.8619710719550201 0.950881785268938 1.022703615402457 1.1097920617924202 1.1884127773683206 1.2329814049298462 1.061872364737198 1.0 11.307607544418872 -7.614189296466349 2.958353941560987 1.1202153796170358 0.9620172612159098 0.485804637308232 0.07505744163583676 0.21889337538883502 3.8753893962080355 0.015305448805840189 0.023596928139943116 2.43114411234729e-08 7.614189296466349 -0.15819811840112596 IHLGS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.5)S(0.5)PK 105.4 0.0006109 90053000.0 1417.4 1649.9 1793.7 1797.1 2205.4 2118.5 1648.7 2353.0 1997.0 1837.0 2359.5 True False 1561.293404565269 1788.942863324554 1915.4312683943292 1908.1027854897748 2050.5003122169664 2101.247638386436 1711.4421807032581 2306.0675691072106 1913.0730347545664 1721.0115064956194 2069.296458102843 0.7545044589679926 0.8645174336038246 0.9256437186145964 0.9221021850291801 0.9909166490802824 1.0154406006729872 0.8270647610697259 1.1144210681254643 0.9245040879780443 0.8316891955024484 1.0 11.014924632613118 -4.749946510698798 0.7905714330478681 0.9698947977031338 0.41366382188263817 0.3606264327918043 0.07814561976255452 2.9488509161044236 0.7572597244773442 0.009710478380312986 1.7456346097222117 1.778498442941219e-05 4.749946510698798 -0.5562309758204956 IHLGSS(ph)PK ddPTM_A549_MK2206_60min_R1 3 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.369)S(0.631)PK;IHLGS(0.093)S(0.907)PK;IHLGS(0.026)S(0.974)PK 100.02 0.00073629 57138800.0 9178.5 9784.199999999999 9266.0 5900.5 13367.2 11032.5 9055.2 9886.7 15318.699999999999 15914.4 16971.5 True False 10727.606407219831 10282.173988302886 10580.05813179778 7346.122764883511 11400.90258742277 12199.951827219202 10700.412627592666 11288.170001748898 11849.03890893722 12319.325986969172 12757.008160428588 0.8409186756261684 0.8060019919245268 0.8293526192619703 0.5758499698754374 0.893697208941798 0.9563333090169732 0.8387870018602522 0.8848602948114488 0.9288258469326821 0.9656908447533116 1.0 13.639002400014679 -8.223029045927941 0.44798010272419514 0.9909441235220212 0.7747868811040154 0.41118078109922174 0.0839376764454049 0.6370619013536273 0.2984371732849571 0.03205035864365868 0.04720322691432095 5.983715741999003e-09 8.223029045927941 -0.21615724241800582 IHLGSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.034)S(0.966)PK 81.525 0.0011393 89011000.0 1397.8 1788.4 1861.8 1655.7 2324.3 2086.2 1811.3 1905.6 2016.9 2031.4 2121.4 True False 1539.7036269940272 1939.114744390346 1988.1529439128974 1757.9688286324754 2161.0491863996986 2069.2106788774063 1880.2300126813905 1867.5913130857195 1932.1367069586825 1903.1370573191073 1860.4812486625842 0.8275835234033401 1.0422651374660659 1.0686229411568058 0.9449000520140687 1.161553865674905 1.1121910959139567 1.0106148686169252 1.0038216264895152 1.0385144748691275 1.0229272983466973 1.0 10.861460134627075 -5.259608256429298 24.645822952661128 1.0316699041444883 0.8275834393340032 0.538163675679225 0.056169714879286424 80.73852066142672 1086581.276329647 0.00761122931319762 0.06806166282449937 5.500367959466396e-06 5.259608256429298 -0.2040864648104851 IHLGSS(ph)PKK ddPTM_A549_MK2206_60min_R1 1 IHLGSSPKK 9 1 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.108)S(0.892)PKK 51.927 0.005512899999999999 1454800.0 716.06 763.46 800.17 575.58 1108.0 871.53 760.96 489.19 1473.8 1344.0 1178.8 True False 836.9134220138194 802.3168529986842 913.6461380661151 716.5971258387676 945.0146677587251 963.7547261252068 899.2165819742153 558.5341805815438 1139.9866531749865 1040.389466551461 886.0714267750769 0.9445213971742981 0.9054764985693944 1.0311201901537423 0.8087351698574418 1.0665219972143516 1.0876715996055353 1.0148353223023805 0.6303489354287956 1.2865629324309136 1.1741598195283602 1.0 9.791279189797383 IHLGSS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 IHLGSSPKK 9 1 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.104)S(0.896)PKK;IHLGS(0.124)S(0.876)PKK 77.37899999999999 0.00042249 6155400.0 1664.26 2264.2799999999997 1985.04 2021.42 2707.8 2261.4 2045.91 2492.1 2271.87 2762.2 2329.58 True False 1833.2144500365425 2455.098822091351 2119.7567514152192 2146.278522422091 2517.613469402876 2242.983908164781 2123.768224614909 2442.3931104853705 2176.3912045407405 2587.7942205999993 2043.056428424335 0.8972901700274482 1.2016793995184925 1.0375419503464414 1.0505233690864642 1.2322779901603271 1.0978570522864295 1.0395054170152418 1.1954604270862041 1.0652624050228692 1.2666288530247702 1.0 10.996513335959708 -9.756931266410113 1.0668404960688502 1.0110603200291302 1.0968108936668366 0.0 0.11839371510931289 0.6129530089029296 1.4316177311167027 0.02533917933055871 0.01619281099291742 1.7501236499209516e-10 9.756931266410113 0.08575057363770644 IHLPALS(ph)PR ddPTM_A549_MK2206_60min_R1 2 IHLPALSPR 9 0 Q8NEA6-2;F8WEV9;Q1PHJ8 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 IHLPALS(1)PR;IHLPALS(1)PR 65.232 0.0018182000000000003 6479400.0 0.0 295.58000000000004 151.63 101.79 0.0 185.906 0.0 234.997 201.27100000000002 139.71 321.97 True False 0.0 310.62375947574327 173.1334140432222 126.72855456952676 0.0 205.57844952558463 0.0 268.30854439812964 155.68343986374185 108.14941396719098 242.01596308005728 0.0 1.2834845913572692 0.7153801420361301 0.5236371723447258 0.0 0.8494416934703627 0.0 1.1086398640133295 0.643277566828279 0.4468689279451202 1.0 7.918958398832068 -10.09759630998558 0.5066930021102724 1.0211636041783003 0.5518086036714919 0.0 0.43984896838930293 1.6496219908820675 0.7801129218787634 0.3511584083717727 0.10373261161389083 7.987367926073076e-11 10.09759630998558 -0.46935500050680845 IHLPALS(ph)PR ddPTM_A549_PD325901_60min_R1 2 IHLPALSPR 9 0 Q8NEA6-2;F8WEV9;Q1PHJ8 Q8NEA6-2 GLIS3 Zinc finger protein GLIS3 1 IHLPALS(1)PR;IHLPALS(1)PR 66.486 0.0016434999999999998 12144900.0 345.48 295.05 333.35 358.95000000000005 495.40999999999997 232.68 497.0 533.25 296.82 309.96000000000004 449.24 True False 380.5528752710662 319.9148989780652 355.9731355963928 381.1215262654022 460.6141106717182 230.7851312248082 515.9136069688357 522.6139104234679 284.34568761935435 290.3890727018956 393.98632796699354 0.965903759236405 0.8119949253794062 0.9035164682826625 0.9673470859560663 1.169111915757408 0.5857693905666249 1.309470837810536 1.3264772742754927 0.7217146064093259 0.7370536795028663 1.0 8.62200175621665 IHLQQQQQQLLQEET(ph)LPR ddPTM_A549_MK2206_60min_R1 2 IHLQQQQQQLLQEETLPR 18 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 IHLQQQQQQLLQEET(1)LPR;IHLQQQQQQLLQEET(1)LPR 144.01 8.974499999999999e-17 8018500.0 2047.19 2481.3999999999996 2273.1 1993.03 2856.8 2252.34 1808.62 2183.3 3348.0 3242.1000000000004 3288.8 True False 2392.7056230099024 2607.692661083662 2595.4597603485345 2481.3224394705153 2436.568504380076 2490.681123817711 2137.22284284352 2492.789461075827 2589.6833456573845 2509.7073582637613 2472.1001937375922 0.9678837569250571 1.05484909862859 1.0499007147539736 1.0037305307269848 0.9856269218183282 1.0075162528311712 0.8645373064803786 1.0083691055041561 1.0475640721268733 1.0152126376679378 1.0 11.27152150123732 -8.520652857945086 24.970339987510823 1.0227505914763477 0.9920237062529111 0.07136220097227541 0.04837392600896122 190.5145986323748 2137234.202281273 0.008601720423915044 0.009826097820762592 3.015415355367343e-09 8.520652857945086 -0.030726885223436584 IHMS(ph)GPK ddPTM_A549_MK2206_60min_R1 7 IHMSGPK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK 75.378 0.0055823999999999995 83140000.0 7716.48 9261.019999999999 7578.25 5441.780000000001 10395.179999999998 8127.88 7003.92 8074.9 10867.73 11225.869999999999 11336.210000000001 True False 9018.833174177013 9732.366360985343 8652.959803291225 6775.0163442907915 8866.062792411676 8987.966866749912 8276.441603791063 9219.541803344113 8406.206507198664 8689.938170294681 8521.116193520449 1.0584098338002987 1.1421468901440333 1.0154725750449256 0.7950855487034185 1.0404813865997424 1.0547875023209354 0.9712860869195237 1.0819640988295354 0.9865147143036068 1.0198121904384552 1.0 13.05682670823321 -5.88848571943093 6.572962522862375 0.9923576861750725 1.0987437035914234 0.23729967266095608 0.07263964297910878 0.2028376736312453 10.906031857947802 0.00943712716868902 0.029927774371216846 1.2927492085788241e-06 5.88848571943093 0.1063860174163509 IHMS(ph)GPK ddPTM_A549_PD325901_60min_R1 6 IHMSGPK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK 64.04 0.0080158 154096000.0 11582.300000000001 11571.300000000001 11897.699999999999 10421.800000000001 13466.800000000001 10843.5 11648.800000000001 12508.6 11714.9 12330.600000000002 14731.100000000002 True False 12758.126569561387 12546.454060480883 12705.149468682168 11065.530916374897 12520.938425937895 10755.194131150965 12092.101458467949 12259.106160193138 11222.56349266213 11552.043811646647 12919.2680881368 0.987527039653014 0.9711427903568116 0.9834264125495431 0.8565137623032911 0.9691677841591759 0.8324925264943601 0.9359741880092726 0.9489009808109904 0.8686686750441629 0.8941716924548059 1.0 13.657236719277465 IHNVGS(ph)PLK ddPTM_A549_MK2206_60min_R1 3 IHNVGSPLK 9 0 P52701;P52701-2;P52701-3;A0A087WWJ1;A0A494C0M1;P52701-4 P52701 MSH6 DNA mismatch repair protein Msh6 1 IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK 108.35 0.00013772 71772600.0 11677.3 11035.0 11736.400000000001 6479.7 14055.2 12539.0 10956.8 11239.8 15574.4 15390.8 15466.8 True False 13648.142757425303 11596.634365704123 13400.797998924189 8067.226790884789 11987.69869881085 13865.86865728543 12947.50873288357 12833.076070443862 12046.823267206204 11914.00759062517 11625.96669803594 1.1739361647862783 0.9974769984214068 1.1526609654909887 0.6938972904719953 1.031114143896182 1.1926637171279608 1.1136715826883359 1.1038287313012731 1.036199705375155 1.0247756509261197 1.0 13.505063060714493 -5.253457163768984 23.139775082572356 1.0280526784972996 1.1739363690782383 0.09233995852207244 0.1240105439860981 617.3884001498155 1789629.6801885231 0.016211275840225713 0.23331109084159024 5.578826256598241e-06 5.253457163768984 0.14588369058093864 IHNVGS(ph)PLK ddPTM_A549_PD325901_60min_R1 4 IHNVGSPLK 9 0 P52701;P52701-2;P52701-3;A0A087WWJ1;A0A494C0M1;P52701-4 P52701 MSH6 DNA mismatch repair protein Msh6 1 IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK 82.48899999999999 0.0011930999999999999 105477700.0 10618.3 11205.7 10401.5 10586.2 13675.7 11068.470000000001 11245.9 11542.1 12161.1 11192.79 13543.300000000001 True False 11696.261999220686 12150.04366540757 11107.408339300671 11240.085530995417 12715.166010603782 10978.33205005954 11673.868878492602 11311.883760897717 11650.011258364426 10486.075329226505 11877.55995805222 0.9847360939896898 1.022941050882309 0.9351591049448305 0.9463295130221897 1.0705200441428813 0.9242918654026191 0.9828507639381329 0.9523743766268248 0.9808421342016859 0.8828476022230157 1.0 13.53595086905689 -10.197709226979825 1.0270739856753033 0.9981330269355811 0.9779239753045293 0.0 0.05246811704007883 1.3167359961654341 2.7596932018024507 0.014940053305616574 0.0069216584445548745 6.34294247908985e-11 10.197709226979825 -0.0202090516310518 IHPMAYQLQLQAAS(ph)NFKSPVK ddPTM_A549_MK2206_60min_R1 1 IHPMAYQLQLQAASNFKSPVK 21 1 Q5SRQ6;P67870 Q5SRQ6 CSNK2B Casein kinase II subunit beta 1 IHPMAYQLQLQAAS(0.538)NFKS(0.462)PVK 57.278 0.001501 2764900.0 1141.4 1139.6 1185.3 933.0 2005.3 1324.4 1131.4 1347.4 2082.0 1574.1 1741.3 True False 1334.0404154492255 1197.6007723748467 1353.3933632225242 1161.585041883962 1710.3230264048466 1464.5471289344302 1336.9607349211872 1538.3980762394408 1610.4303242708108 1218.5097167400702 1308.8871525648483 1.0192172891567373 0.9149763369806718 1.034003092299029 0.8874600377945201 1.3067001406907837 1.1189254368220791 1.021448436025464 1.1753481369458407 1.230381336630182 0.9309509336632439 1.0 10.354125003447862 -6.732334566594219 24.998992927410686 1.1217280175548405 0.965424990748502 0.30365935237783637 0.10719274203908857 196.13510416652596 168465.36822605814 0.015262861341912647 0.03176814997908379 1.852104271731561e-07 6.732334566594219 -0.15630302680633856 IHPMAYQLQLQAASNFKS(ph)PVK ddPTM_A549_MK2206_60min_R1 9 IHPMAYQLQLQAASNFKSPVK 21 1 Q5SRQ6;P67870 Q5SRQ6 CSNK2B Casein kinase II subunit beta 1 IHPMAYQLQLQAAS(0.478)NFKS(0.522)PVK;IHPMAYQLQLQAAS(0.127)NFKS(0.873)PVK;IHPMAYQLQLQAAS(0.099)NFKS(0.901)PVK;IHPMAYQLQLQAAS(0.014)NFKS(0.986)PVK;IHPMAYQLQLQAAS(0.035)NFKS(0.965)PVK;IHPMAYQLQLQAASNFKS(1)PVK;IHPMAYQLQLQAAS(0.024)NFKS(0.976)PVK;IHPMAYQLQLQAAS(0.02)NFKS(0.98)PVK;IHPMAYQLQLQAAS(0.03)NFKS(0.97)PVK 216.87 7.465899999999998e-68 702768200.0 20236.5 23180.300000000003 22524.3 19938.899999999998 31376.8 25559.100000000002 24164.8 23773.0 34982.4 30728.999999999996 31842.4 True False 23651.92646507645 24360.078258933514 25718.584435360743 24823.93139509124 26761.31428459562 28263.74699724255 28555.23136576233 27142.895551759106 27058.942255413644 23787.29755778263 23935.053274467875 0.9881710390971452 1.017757427969422 1.0745154456286674 1.0371370855301816 1.1180804144331105 1.1808516435345562 1.1930297809791348 1.1340227757384236 1.1305152299066783 0.9938268064419619 1.0 14.546837396750854 -6.672143749531045 6.907333609484586 1.091018266754425 1.0309999675200763 0.2347843385280941 0.06343969571223705 0.3876607760707197 25.308871735355194 0.010938456499003497 0.02285032372860562 2.1274347580415073e-07 6.672143749531045 -0.06001829923434876 IHPMAYQLQLQAASNFKS(ph)PVK ddPTM_A549_PD325901_60min_R1 10 IHPMAYQLQLQAASNFKSPVK 21 1 Q5SRQ6;P67870 Q5SRQ6 CSNK2B Casein kinase II subunit beta 1 IHPMAYQLQLQAAS(0.004)NFKS(0.996)PVK;IHPMAYQLQLQAAS(0.002)NFKS(0.998)PVK;IHPMAYQLQLQAAS(0.129)NFKS(0.871)PVK;IHPMAYQLQLQAAS(0.021)NFKS(0.979)PVK;IHPMAYQLQLQAAS(0.424)NFKS(0.576)PVK;IHPMAYQLQLQAAS(0.189)NFKS(0.811)PVK;IHPMAYQLQLQAAS(0.006)NFKS(0.994)PVK;IHPMAYQLQLQAAS(0.005)NFKS(0.995)PVK;IHPMAYQLQLQAAS(0.012)NFKS(0.988)PVK;IHPMAYQLQLQAASNFKS(1)PVK 233.15 7.047199999999999e-77 1304559600.0 43333.5 45416.2 49441.7 49028.700000000004 53407.50000000001 50249.1 48909.799999999996 52750.2 51309.9 51922.90000000001 56203.2 True False 47732.68501956333 49243.58256216776 52797.11107909454 52057.09144674337 49656.34144587271 49839.887989635994 50771.089203469484 51698.055879268664 49153.52333798366 48644.479232782454 49290.562701439114 0.9683939968120855 0.9990468735454305 1.0711403600501612 1.0561269458833644 1.0074208676952865 1.0111446341467885 1.0300367133359414 1.0488428828133314 0.9972197646781692 0.9868923495036952 1.0 15.589023830470175 -8.804802163485164 24.955720183756206 0.9986870937516039 1.025045888339564 0.1812959183296381 0.027326649447915418 182.8074425164117 105206.5012741055 0.004831241385952672 0.005143270449799662 1.567464943284011e-09 8.804802163485164 0.026358794587959977 IHPMAYQLQLQAASNFKSPVK ddPTM_A549_MK2206_60min_R1 2 IHPMAYQLQLQAASNFKSPVK 21 1 Q5SRQ6;P67870 Q5SRQ6 CSNK2B Casein kinase II subunit beta 0 ; 157.98 6.7677999999999995e-28 9730700.0 3416.7 3840.2999999999997 3877.9 3916.2 5751.7 3003.5 3917.3 3673.9 5588.3 4996.3 5443.0 False True 3993.355429705073 4035.7548667524757 4427.844531545285 4875.6691758049 4905.632549230921 3321.328376438059 4629.022703647486 4194.6865758468775 4322.558972681351 3867.632359918948 4091.352880842167 0.9760476658965379 0.9864108485117404 1.082244592559773 1.1917009648899533 1.1990245505836548 0.811792204967271 1.1314161448461137 1.025256607780906 1.0565109142557247 0.9453186934887005 1.0 11.99836226028584 IHQDS(ph)ES(ph)GDELSSSSTEQIR ddPTM_A549_PD325901_60min_R1 1 IHQDSESGDELSSSSTEQIR 20 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 2 IHQDS(0.986)ES(0.967)GDELS(0.027)S(0.008)S(0.008)S(0.002)T(0.002)EQIR 56.122 0.0082069 1130100.0 413.11 413.32 273.96 254.96 384.81 420.73 347.46 354.28 367.13 593.52 411.24 True False 455.0486230844918 448.15192694666644 292.5525730553104 270.7083001438276 357.7822731224316 417.30371437258685 360.68278043740764 347.21360747271666 351.7008028289657 556.0450459092433 360.6600870651462 1.2617105119322398 1.2425880850678013 0.8111587157756841 0.7505912349400877 0.9920207030222483 1.1570554362374152 1.0000629217733688 0.9627170289292348 0.9751586478307422 1.5417426708733775 1.0 8.49449596394188 -5.711276275728545 12.653503412899259 0.9739463621599254 1.2525619041531562 0.13406000748750124 0.19870164908809856 0.6120682229412138 152.69830415813016 0.014339757040374315 0.05551943293056645 1.944122937515021e-06 5.711276275728545 0.2786155419932308 IHQDS(ph)ESGDELSSSSTEQIR ddPTM_A549_MK2206_60min_R1 2 IHQDSESGDELSSSSTEQIR 20 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 IHQDS(0.9)ES(0.1)GDELSSSSTEQIR;IHQDS(0.963)ES(0.037)GDELSSSSTEQIR 137.62 8.186000000000001e-18 11445900.0 1451.76 1636.81 1550.15 1241.21 1951.65 1493.22 1796.0100000000002 1634.67 2589.06 2004.68 1966.3600000000001 True False 1696.7815958757392 1720.1166376192268 1769.984579430858 1545.306505720035 1664.564870335122 1651.2315492807852 2122.3217690700035 1866.3894784669192 2002.6420438792434 1551.8213956892728 1478.058543224839 1.1479799657824707 1.1637675960156921 1.1975064097049177 1.0454974958897594 1.1261833152449847 1.1171624810463299 1.4358847819650677 1.262730415531997 1.354913885555483 1.0499052306165746 1.0 10.529487697818327 IHQDS(ph)ESGDELSSSSTEQIR ddPTM_A549_PD325901_60min_R1 2 IHQDSESGDELSSSSTEQIR 20 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 IHQDS(0.928)ES(0.072)GDELSSSSTEQIR;IHQDS(0.974)ES(0.026)GDELSSSSTEQIR 156.88 2.9787e-27 14485600.0 1783.81 1220.75 1200.01 1499.9 1508.0 1487.52 1518.76 1563.69 1251.37 1656.47 1827.4099999999999 True False 1964.9010780284843 1323.626886722498 1281.449894846339 1592.5454164799473 1402.0832823175767 1475.4061303056837 1576.557242897362 1532.5009762589266 1198.7792706563962 1551.8802015050608 1602.650154906427 1.2260324388407824 0.8258988293048772 0.7995817995107974 0.9936949817803066 0.8748529914811255 0.9206039919497138 0.9837188971472139 0.9562292628664201 0.7479980998887363 0.9683212501206601 1.0 10.646243816289534 IHQDSES(ph)GDELSSSSTEQIR ddPTM_A549_MK2206_60min_R1 2 IHQDSESGDELSSSSTEQIR 20 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 IHQDS(0.017)ES(0.983)GDELSSSSTEQIR;IHQDS(0.028)ES(0.972)GDELSSSSTEQIR 156.89 2.9751999999999997e-27 27697000.0 469.99 544.21 549.64 588.6600000000001 666.29 631.3 366.83000000000004 617.6 799.52 1030.38 1024.55 True False 549.312821847715 571.9079644911503 627.5872168747386 732.881726425952 568.2796236290259 698.1037469769752 433.47826267556974 705.1466913206756 618.4299965710853 797.6164423700113 770.1259588585045 0.7132765952493239 0.7426161368964154 0.8149150274131266 0.9516387780412484 0.7379047766047788 0.906479958176865 0.5628667073086064 0.9156251431465283 0.803024478603129 1.035696087367648 1.0 9.58895061656795 -10.642998120070011 0.5522948637042148 1.031911975895229 0.7901721896368146 0.4061226336375192 0.10416645330760613 1.0632332817192904 0.4670535652394684 0.13172303899782362 0.022368778985149024 2.2751072790048314e-11 10.642998120070011 -0.24173978625841452 IHQDSES(ph)GDELSSSSTEQIR ddPTM_A549_PD325901_60min_R1 2 IHQDSESGDELSSSSTEQIR 20 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 IHQDS(0.003)ES(0.997)GDELSSSSTEQIR;IHQDS(0.021)ES(0.979)GDELSSSSTEQIR 172.8 5.862300000000001e-35 40919000.0 823.01 1218.2 935.04 1378.6399999999999 1335.36 1649.88 958.28 1361.69 1804.4699999999998 1110.31 1262.4299999999998 True False 906.5613693320606 1320.861989273271 998.4974372522911 1463.7954616813875 1241.5689203419092 1636.443924295971 994.7478697909365 1334.5300247248601 1728.6344011134563 1040.2048371133103 1107.1591132031233 0.818817601301485 1.1930191185003967 0.9018554111554363 1.322118423833842 1.121400623935547 1.4780566810867621 0.8984687547872232 1.20536425958138 1.5613242762481918 0.9395260579158243 1.0 10.11264685577297 -4.391861327199147 0.5955028826257639 1.2505577135757469 7.069934128901554e-11 0.10859850461294618 0.2222391085676794 10.804165647584503 1.2292571761627153 0.041556609209548324 11.810006915081765 4.0563803740027405e-05 4.391861327199147 -1.2505577135050474 IHQIEYAMEAVK ddPTM_A549_PD325901_60min_R1 1 IHQIEYAMEAVK 12 0 P25786;P25786-2;B4DEV8 P25786 PSMA1 Proteasome subunit alpha type-1;Proteasome subunit alpha type 0 84.289 0.00053015 1562400.0 925.98 1363.5 1129.6 1001.3 1207.5 1326.4 1222.8 1374.3 1371.8 1164.9 1410.8 False True 1019.9848079295526 1478.4069302036667 1206.2614488366132 1063.148026882706 1122.6893656488558 1315.598238166519 1269.3343231418355 1346.8885083825069 1314.148016563002 1091.3480151969222 1237.2805437980455 0.8243763413579056 1.1948841656116584 0.9749296187377086 0.8592618967555977 0.9073846439082988 1.0632982509593691 1.025906638154509 1.088587802607807 1.0621261468551009 0.8820538079802352 1.0 10.272956942015163 -7.275086669112293 24.820857128586077 1.0367946494515279 0.961754757881765 0.08341820638520159 0.10282394766168795 1106.4531982413414 2012345.5694764839 0.013502618573414888 0.02165164910885013 5.3077850990610305e-08 7.275086669112293 -0.07503989156976287 IHRAS(ph)DPGLPAEEPK ddPTM_A549_MK2206_60min_R1 8 IHRASDPGLPAEEPK 15 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK 151.28 1.15e-14 2221429300.0 23846.16 25449.989999999998 25428.79 19003.75 38267.1 29837.089999999997 29631.9 31957.600000000006 42655.100000000006 39696.4 41358.100000000006 True False 27870.80882536247 26745.285785303717 29034.97479184956 23659.669603110746 32638.06028212085 32994.431059542614 35015.632668473714 36487.68766604539 32993.78795619782 30728.955669652845 31087.74234450824 0.8965208382295393 0.8603161171666224 0.9339685870427542 0.7610610426745997 1.0498691066219055 1.061332492205604 1.126348522849854 1.173700143989101 1.0613118054880653 0.9884589021975482 1.0 14.924058228565253 -6.785166424931498 24.87754074826548 1.0518989649491373 0.8678489142654318 0.7016641716719396 0.06319695950483516 102.8945718454175 107883.58251658098 0.009699503715971574 0.01833763823222685 1.6399612072284494e-07 6.785166424931498 -0.1840500506837055 IHRAS(ph)DPGLPAEEPK ddPTM_A549_PD325901_60min_R1 8 IHRASDPGLPAEEPK 15 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK 183.6 8.1776e-34 3505617300.0 54741.3 54150.9 55901.0 52225.0 60226.5 47615.1 50384.899999999994 50180.49999999999 53544.700000000004 54866.6 59308.100000000006 True False 60298.59647758484 58714.38638560006 59694.77802002087 55450.819638419394 55996.39841014564 47227.33841233612 52302.3249411752 49179.61056165928 51294.40246570999 51402.313512407454 52013.5796850219 1.1592856489158108 1.128828024165154 1.147676787129706 1.0660835107718476 1.0765726710071188 0.9079809291790765 1.0055513436664396 0.9455148224651283 0.9861732796768262 0.9882479503176654 1.0 15.666600710237123 -6.72988885399602 1.6483073428914932 0.9855832698430946 1.1430321689268 0.8118586049361509 0.03469498052744091 0.11321539881734073 0.6205024662985738 0.0049254850726086295 0.012457378830254141 1.8625637488202068e-07 6.72988885399602 0.1574488990837053 IHRAS(ph)DPGLPAEEPKEK ddPTM_A549_MK2206_60min_R1 10 IHRASDPGLPAEEPKEK 17 2 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK 164.18 2.4673000000000004e-23 4603678800.0 48887.41 54513.700000000004 55088.62 32904.81999999999 76094.6 60283.100000000006 59315.61 52878.329999999994 86654.09999999999 90476.2 94141.3 True False 57138.409625579705 57288.214483161304 62901.01467737078 40966.50237715351 64901.18514190713 66662.21762931686 70092.48854330795 60373.99521059393 67027.08470816299 70037.5635815501 70763.41704229775 0.8074569037759454 0.809573885457201 0.8888917085472663 0.5789220488415139 0.9171573088833944 0.9420435080102271 0.9905187097085947 0.8531808911164691 0.9471996620527606 0.9897425323551888 1.0 16.110716094493466 -6.980406849734819 24.994313391487292 0.9621944870602203 0.7780673640716128 0.5376459580872784 0.07937401788775902 135.06592188373142 172298.1084569388 0.010977073949424725 0.02074290133939886 1.046148050943054e-07 6.980406849734819 -0.18412712298860745 IHRAS(ph)DPGLPAEEPKEK ddPTM_A549_PD325901_60min_R1 10 IHRASDPGLPAEEPKEK 17 2 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK 152.13 1.3819e-17 9115344900.0 83114.09999999999 81351.2 89590.59999999999 87197.4 94061.69999999998 98822.90000000001 92975.7 102029.5 96755.5 96128.3 106033.3 True False 91551.78224663365 88206.95112606132 95670.75686804301 92583.38535833634 87455.1306872489 98018.1190670281 96513.94114175507 99994.44158190586 92689.20281131462 90058.7427326417 92991.8763004687 0.9845137649531672 0.9485446969695861 1.02880768379077 0.9956072405635469 0.9404599000096537 1.0540503425301255 1.0378749733998927 1.0753029787119357 0.9967451620378526 0.9684581741490011 1.0 16.50481706853422 -5.758476423322434 24.999999999560924 1.0073502952234543 0.9665292298161927 0.17010482177198916 0.0370857049303397 101.4055770726671 855564.785932182 0.004900173970018737 0.017461915916172615 1.7439080269653682e-06 5.758476423322434 -0.0408210654072616 IHRAS(ph)DPGLPAVFLRPGAGIPR ddPTM_A549_MK2206_60min_R1 4 IHRASDPGLPAVFLRPGAGIPR 22 2 H7BZB3 H7BZB3 CAD 1 IHRAS(1)DPGLPAVFLRPGAGIPR;IHRAS(1)DPGLPAVFLRPGAGIPR;IHRAS(1)DPGLPAVFLRPGAGIPR;IHRAS(1)DPGLPAVFLRPGAGIPR 81.949 1.6728e-05 35998900.0 1687.53 1729.98 1503.1499999999999 1246.7199999999998 2463.2799999999997 1819.8899999999999 1794.75 1912.83 2415.54 2306.3599999999997 2791.8700000000003 True False 1972.3438078526653 1818.028592657982 1716.3192726971545 1552.1664559673864 2100.9347750872844 2012.4695518547883 2120.832843379709 2183.979510296191 1868.4240468247424 1785.3516741634135 2098.571627307885 0.9398506022798236 0.8663171506755799 0.81785117570607 0.7396299634330591 1.0011260743968176 0.9589711047587395 1.010607794264512 1.0406981024030473 0.8903313198900037 0.8507461222344456 1.0 11.03519199001045 -6.78141382182045 24.99986996401047 0.9628932737015145 0.8410796033365322 0.4366286547703364 0.06758886469173903 169.88688506627267 212628.88408587957 0.009615775327838657 0.0181883619473092 1.6541929980097085e-07 6.78141382182045 -0.12181367036498225 IHRAS(ph)DPGLPAVFLRPGAGIPR ddPTM_A549_PD325901_60min_R1 4 IHRASDPGLPAVFLRPGAGIPR 22 2 H7BZB3 H7BZB3 CAD 1 IHRAS(1)DPGLPAVFLRPGAGIPR;IHRAS(1)DPGLPAVFLRPGAGIPR;IHRAS(1)DPGLPAVFLRPGAGIPR;IHRAS(1)DPGLPAVFLRPGAGIPR 77.19 3.2692e-05 66434800.0 2509.92 2518.9799999999996 2438.95 2887.43 3104.6100000000006 2538.66 2223.5800000000004 3084.21 3157.2799999999997 3065.19 3070.55 True False 2764.7252306945525 2731.2632849610786 2604.4718135977873 3065.779993270682 2886.5529039230596 2517.985994650041 2308.199553689664 3022.69301203406 3024.590501336956 2871.6533802914023 2692.8918158201664 1.0266751952129602 1.0142491684647292 0.9671654086870738 1.1384712803016732 1.071915658462466 0.9350490724719831 0.8571452964168418 1.1224710158337523 1.1231756446984356 1.0663827501056855 1.0 11.394940556865274 IHRASDPGLPAEEPKEK ddPTM_A549_PD325901_60min_R1 1 IHRASDPGLPAEEPKEK 17 2 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 0 60.528 0.0010695 6347900.0 1553.1 1299.6 1377.6 1228.8 1797.5 1653.0 1598.7 1470.1 1333.6 1530.2 1714.5 False True 1710.769568668209 1409.1218529465964 1471.0922201817632 1304.7001851927193 1671.2498010383595 1639.5385160504036 1659.539403342207 1440.7777022288608 1277.5534297189236 1433.5829108544335 1503.6273691109648 1.1377616581159462 0.9371483134014476 0.9783622261754664 0.8677018069737163 1.1114787050108719 1.090388848814183 1.1036906067514765 0.9582013016168597 0.8496476294351374 0.9534163452358906 1.0 10.554231365411908 -8.508541628371999 24.15386901324459 0.9276804899187028 1.0259488751960766 0.21842172047872566 0.08376779261808776 538.0176042027578 906404.3390791614 0.015494301644700637 0.018372116916968998 3.100690164240136e-09 8.508541628371999 0.0982683852773738 IHS(ph)MTIEAPITK ddPTM_A549_MK2206_60min_R1 1 IHSMTIEAPITK 12 0 O60658-6;O60658-2;O60658;A0A2R8Y4E6;O95263-2;O95263-3;O95263-6;O95263-4;O95263 O60658-6;A0A2R8Y4E6 PDE8A;PDE8B High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A;High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8B 1 IHS(0.982)MT(0.018)IEAPITK 84.46799999999999 0.00014697 5087400.0 768.28 605.89 754.55 381.4 855.3 557.6 804.42 561.74 919.62 940.47 1079.2 True False 897.9468813573959 636.7272130345697 861.5565360833166 474.8430171216965 729.4865030090588 616.6048618950762 950.5727014188631 641.3683652566006 711.3275383313751 728.0171738152177 811.2048555952351 1.1069298650813824 0.7849154361475813 1.0620702405080342 0.5853552451597106 0.899262988846123 0.7601099249370642 1.171803515304854 0.7906367433981714 0.8768778113506565 0.8974516964411202 1.0 9.66392247762165 IHS(ph)MTIEAPITK ddPTM_A549_PD325901_60min_R1 3 IHSMTIEAPITK 12 0 O60658-6;O60658-2;O60658;A0A2R8Y4E6;O95263-2;O95263-3;O95263-6;O95263-4;O95263 O60658-6;A0A2R8Y4E6 PDE8A;PDE8B High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A;High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8B 1 IHS(0.98)MT(0.02)IEAPITK;IHS(0.985)MT(0.015)IEAPITK;IHS(0.791)MT(0.209)IEAPITK 102.73 6.3388e-05 12595800.0 3557.5200000000004 2836.5 3228.33 3272.24 3667.26 3062.59 3351.58 3041.5600000000004 3464.79 3359.27 3923.63 True False 3918.6768114921974 3075.541809697616 3447.4238873253394 3474.3588330037614 3409.6843089601857 3037.6492824384795 3479.1262109549475 2980.8936997423402 3319.176925431788 3147.1651189033964 3441.0483839398416 1.1388031710863342 0.8937804606444569 1.0018527793492396 1.00968031987559 0.9908853141600568 0.8827685471136885 1.0110657633274858 0.8662748578761205 0.9645830442033725 0.9145948466147511 1.0 11.748632462345618 -5.243914465068213 24.234968019429267 0.9702179152825978 1.1388033829624113 0.4630183208048414 0.054739568783461624 1576.188022790518 2179637.625492556 0.006770952705482659 0.2740875681657874 5.702765780249924e-06 5.243914465068213 0.16858546767981353 IHS(ph)PIIR ddPTM_A549_MK2206_60min_R1 2 IHSPIIR 7 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 IHS(1)PIIR;IHS(1)PIIR 101.72 0.0033398000000000004 168968000.0 2165.81 1704.77 1567.9499999999998 1312.59 2276.2 2192.79 1664.71 1884.8799999999999 2601.68 2538.8 2648.61 True False 2531.345779029339 1791.5355113385988 1790.3088870874508 1634.1746089244043 1941.3739952639075 2424.8295823438 1967.1662586447326 2152.0675122029056 2012.403634029244 1965.2833167268222 1990.8870390827428 1.271466300868381 0.8998679865654302 0.8992518671035681 0.8208273884174333 0.9751301591467252 1.2179644222612382 0.9880853207779488 1.0809591252321493 1.0108075418263882 0.9871395403891338 1.0 10.959195650985004 -7.0157502290794165 24.85350353669058 1.0263540249084904 0.9543323705817128 0.061230869544681044 0.12359482911498604 1437.577509247206 2268467.638774398 0.017302570173527338 0.030572139329474377 9.643834992432919e-08 7.0157502290794165 -0.07202165432677754 IHS(ph)PIIR ddPTM_A549_PD325901_60min_R1 4 IHSPIIR 7 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR 93.162 0.0037454999999999997 274906400.0 2070.7 2075.71 1956.8000000000002 1703.77 2268.72 1666.4499999999998 1619.52 1919.99 2068.2 1570.23 2202.67 True False 2280.9159396312275 2250.637366404879 2089.6002151943035 1809.0080033575837 2109.372933859106 1652.878983709736 1681.1517198353488 1881.694293246984 1981.2807463592374 1471.0854098228724 1931.7555538755623 1.1807477064347847 1.1650735839167452 1.0817104736684033 0.9364580315186786 1.0919460951605398 0.8556356835075052 0.8702714566874455 0.9740850955349172 1.0256374013701246 0.7615277237699792 1.0 10.91569683042812 -5.955438318683227 2.9489907293294904 0.989969743409252 1.1748709321246378 0.42715262085981287 0.09537213403323538 0.1540470442883625 2.697543277335491 0.009738742425729578 0.03529245869441254 1.1080559274828273e-06 5.955438318683227 0.18490118871538574 IHS(ph)PIPDMSK ddPTM_A549_MK2206_60min_R1 4 IHSPIPDMSK 10 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 IHS(1)PIPDMSK;IHS(1)PIPDMSK;IHS(1)PIPDMSK;IHS(1)PIPDMSK 83.182 0.00030564 79525000.0 5774.13 6490.6 5854.4 4181.799999999999 8331.5 5861.200000000001 5196.49 5787.599999999999 8073.3 8184.6 8282.199999999999 True False 6748.66198007521 6820.943816405912 6684.641951953041 5206.341187728132 7105.947386671316 6481.428293650326 6140.624968543927 6608.010023781642 6244.7104404109205 6335.693175548428 6225.501162908507 1.084035132831344 1.0956457380564073 1.073751618870476 0.836292701822542 1.141425758460781 1.0411094824408085 0.9863663675994037 1.061442259966494 1.0030855792971114 1.017700103133294 1.0 12.603974265800982 -6.026245636655161 24.964894942252176 1.006824800355695 1.088555082018352 0.18535556187615365 0.06877182798756164 741.3661810970441 705189.1577131577 0.008693049978395725 0.023085326028036368 9.413570150539825e-07 6.026245636655161 0.08173028166265706 IHS(ph)PIPDMSK ddPTM_A549_PD325901_60min_R1 4 IHSPIPDMSK 10 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 IHS(1)PIPDMSK;IHS(0.999)PIPDMS(0.001)K;IHS(1)PIPDMSK;IHS(1)PIPDMSK 85.522 0.00020205 157654000.0 13393.899999999998 12940.900000000001 13132.9 13217.300000000001 14005.3 12372.9 12264.0 13243.7 13416.7 15794.4 16647.1 True False 14753.638867931953 14031.475059092507 14024.177568543178 14033.702602333755 13021.616043662045 12272.139204621926 12730.713231118303 12979.544014018336 12852.842756831053 14797.13888851084 14599.612234661501 1.0105500496036992 0.9610854612823101 0.9605856198870706 0.9612380367894842 0.8919151984562251 0.8405798049544199 0.8719898190784703 0.889033476053775 0.8803550772613415 1.0135295822022166 1.0 13.833642431219126 -5.869638513416896 1.2808657024922632 0.9229364180121514 1.0008489154563258 0.2313136835434424 0.05150567509920207 0.9202664271108719 2.3588239881197586 0.008946046184344936 0.07013895208123078 1.3500861641458311e-06 5.869638513416896 0.07791249744417439 IHVS(ph)DQELQSANASVDDSRLEELK ddPTM_A549_PD325901_60min_R1 1 IHVSDQELQSANASVDDSRLEELK 24 1 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 IHVS(1)DQELQSANASVDDSRLEELK 115.54 4.2112999999999995e-16 9339400.0 2606.5 2965.4 3096.9 3625.6 4708.6 3604.7 4144.6 4164.8 3878.4 4299.4 4170.0 True False 2871.1099611961154 3215.3046650722044 3307.0742571725464 3849.545077664975 4377.884179788158 3575.3445183344775 4302.325021012146 4081.729796777608 3715.4043354993046 4027.9351502598065 3657.1164358079486 0.7850748018532299 0.8791912211463027 0.9042846502758206 1.0526175868979446 1.1970863538614607 0.9776403297765373 1.1764254971175547 1.116106054708059 1.015938212718808 1.1013964747802554 1.0 11.836490844808301 -6.01605291958067 2.370902586288739 1.0411117242264967 0.826918602617159 0.6138312203015893 0.07572801628380497 0.17930783144894202 1.9665384643444228 0.011258390748577053 0.042446138357989355 9.637115864414453e-07 6.01605291958067 -0.21419312160933768 IHVT(ph)VRR ddPTM_A549_PD325901_60min_R1 1 IHVTVRR 7 1 Q9UBU9-2;Q9UBU9;E9PIN3;E9PMV7;E9PLA7 Q9UBU9-2 NXF1 Nuclear RNA export factor 1 1 IHVT(1)VRR 49.418 0.033757 2405300.0 296.38 325.24 366.85 505.5 400.52 317.72 287.03 432.11 327.57 392.97 480.22 True False 326.4682794165758 352.6491162298794 391.74664704825756 536.723586926204 372.3888569189895 315.1325936597304 297.95308371884266 423.4912270662627 313.8033720553598 368.15780713532024 421.1559843653941 0.7751718876997663 0.8373361161215787 0.930169964552561 1.2744056996719384 0.8842064953205216 0.7482562408191308 0.7074649174647348 1.005544840362146 0.7451001142206366 0.8741602180723312 1.0 8.718210855825081 -5.516024542792146 4.341171543211391 0.894602335857973 0.7850344782995133 0.06416429071960927 0.15028506321695317 0.5270776228758416 23.79598954146216 0.022445955470693824 0.12007856159522785 3.047722752257448e-06 5.516024542792146 -0.10956785755845966 IIAEGANGPTT(ph)PEADKIFLER ddPTM_A549_MK2206_60min_R1 2 IIAEGANGPTTPEADKIFLER 21 1 P00367;P00367-2;P00367-3;P49448 P00367 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial 1 IIAEGANGPT(0.063)T(0.937)PEADKIFLER;IIAEGANGPT(0.198)T(0.802)PEADKIFLER 56.468 0.0022886 8251000.0 3925.9 4080.8 4299.6 3615.3 5583.700000000001 4935.6 4291.799999999999 4731.799999999999 6527.4 5314.9 6198.4 True False 4588.495940960328 4288.495289493921 4909.347932600662 4501.0486622969875 4762.345126682667 5457.881916013879 5071.5645060409715 5402.547140529747 5048.954322115898 4114.260398641638 4659.166212862775 0.9848319916753894 0.9204426486555629 1.0536966719597165 0.9660631230263336 1.022145360158013 1.1714288923511793 1.0885133249892802 1.1595523520098265 1.083660485899176 0.8830464960196547 1.0 12.185856083276636 -5.773426911033363 24.59695522891525 1.0549631926650533 0.9526373305960376 0.16901324433113862 0.07981993074095461 162.2284612726339 332876.21598128526 0.009346751795815079 0.029395823407768237 1.6848959600628085e-06 5.773426911033363 -0.10232586206901573 IIAEGANGPTT(ph)PEADKIFLER ddPTM_A549_PD325901_60min_R1 2 IIAEGANGPTTPEADKIFLER 21 1 P00367;P00367-2;P00367-3;P49448 P00367 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial 1 IIAEGANGPT(0.243)T(0.757)PEADKIFLER;IIAEGANGPT(0.168)T(0.832)PEADKIFLER 57.431999999999995 0.0018795 14647600.0 4402.4 4924.2 4544.0 4499.1 4994.6 5013.8 4596.299999999999 5193.799999999999 5049.4 5438.3 5381.299999999999 True False 4849.328407124408 5339.179615481401 4852.383165291759 4776.99918880254 4643.796526434599 4972.96927512009 4771.214711691867 5090.205584542719 4837.191277761495 5094.924809893917 4719.4342148712985 1.0275232551910147 1.1313177326759292 1.02817052730633 1.0121974311560165 0.9839731448743667 1.0537214947185582 1.0109717594234928 1.0785626735728389 1.0249515212054732 1.0795626293167555 1.0 12.20439819841754 -2.0000000000000004 0.0993987301396842 0.9845433092805471 1.2071161188972965 0.0 0.043222260754129584 143.3862648001879 0.979442499487608 0.2452026431956333 4.370252301434578 0.00999999999999999 2.0000000000000004 0.2225728096167494 IIAEGANGPTTPEADKIFLER ddPTM_A549_MK2206_60min_R1 2 IIAEGANGPTTPEADKIFLER 21 1 P00367;P00367-2;P00367-3;P49448 P00367 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial 0 ; 90.316 2.7401e-06 2843800.0 1873.5900000000001 2084.73 2110.39 1706.96 2460.4 1741.05 1766.49 1760.9700000000003 3191.9 3291.6 3193.5 False True 2189.8061871224068 2190.8338523982197 2409.675035696601 2125.1652766283455 2098.4784192721722 1925.2867553845451 2087.438367183074 2010.5928902444468 2468.939746416909 2548.025273884516 2400.4658138837895 0.9122421883523724 0.912670299125652 1.0038364311457997 0.8853137021726518 0.8741963360340373 0.8020471461201786 0.8695972069711511 0.8375844715703096 1.0285252687778683 1.0614711774470078 1.0 11.229098674734196 -8.771505075040409 24.999495972737396 1.0134702760764076 0.8880041480678283 0.6111118066789087 0.050265370085498425 110.76230604305083 275092.1352887347 0.009029155436314922 0.009664782014346509 1.6923684677896905e-09 8.771505075040409 -0.12546612800857926 IIAEGANGPTTPEADKIFLER ddPTM_A549_PD325901_60min_R1 1 IIAEGANGPTTPEADKIFLER 21 1 P00367;P00367-2;P00367-3;P49448 P00367 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial 0 90.316 2.7401e-06 2540800.0 1448.1 1589.0 1579.7 1546.7 1706.9 1930.4 1967.6 1920.5 2308.0 1851.3 2159.2 False True 1595.1100459651238 1722.9106065959857 1686.9079415077892 1642.236146189435 1587.0132324853273 1914.6794624220802 2042.4780947120344 1882.1941208968967 2211.0027862861994 1734.4086020551656 1893.632088296528 0.8423547825491549 0.9098444292554633 0.8908319371717536 0.8672414015051658 0.8380789712498858 1.0111148169993707 1.0786034453764486 0.9939597731416134 1.1675989227005397 0.9159163560728438 1.0 10.886940343055764 -7.429578569516747 3.5369287601824997 1.0729079327129998 0.873247031048203 0.5450827271765543 0.06711035837658004 0.10983020550615298 2.5781509494449075 0.009968022724752458 0.01617818584963524 3.718959342671808e-08 7.429578569516747 -0.19966090166479677 IIALDGDTK ddPTM_A549_MK2206_60min_R1 2 IIALDGDTK 9 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 140.35 0.00011435 24090000.0 12173.3 14778.7 13036.2 12360.1 17925.6 14222.900000000001 13416.7 12735.1 19420.3 19638.4 19091.7 False True 14227.85543138957 15530.872705068572 14884.929183870294 15388.325054865978 15288.767985898736 15727.95783760308 15854.340721422224 14540.33942460805 15021.633057846508 15202.07180053885 14350.703985885433 0.9914395450831757 1.0822376881541065 1.037226410530821 1.0723045412964474 1.0653671067939197 1.0959711699908408 1.1047779075518307 1.013214364877788 1.0467523455728 1.0593258571489437 1.0 13.808833890808176 -9.940314921843804 0.6308852981833127 1.0016387662051447 1.061548898388436 0.006252842686998883 0.03606626455958025 0.6441747350881655 0.5175765321864373 0.018109324247241976 0.007260037542709641 1.1473213576629071e-10 9.940314921843804 0.05991013218329133 IIALDGDTK ddPTM_A549_PD325901_60min_R1 1 IIALDGDTK 9 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 141.2 0.00011057 14356000.0 8959.4 9715.6 9433.0 10030.0 13388.0 10316.0 10575.0 10325.0 10983.0 10999.0 11269.0 False True 9868.951692438324 10534.36770890116 10073.180105237063 10649.530320217264 12447.673066092664 10231.989916258899 10977.437411862045 10119.059775194191 10521.422704411325 10304.521262898916 9882.984440076683 0.9985801103175419 1.065909571422883 1.0192447601545453 1.0775621862796976 1.2595054805121277 1.0353137737186913 1.1107411408387151 1.0238870491549288 1.0645997439544372 1.0426527862487418 1.0 13.270731053873865 -10.153515278710767 0.5833022379713749 0.9983469900337153 1.078755271802691 0.07472073749839903 0.06730791397040164 1.315848199739146 0.8298579161192164 0.05107378836469719 0.0156896397114302 7.022386381725515e-11 10.153515278710767 0.08040828176897563 IIAPPER ddPTM_A549_MK2206_60min_R1 4 IIAPPER 7 0 P60709;P63261;P63267-2;Q562R1;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTBL2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;; 110.9 0.022887 165145000.0 14132.3 15421.8 14212.05 12725.9 18447.3 14524.4 13787.8 13919.3 19585.2 17572.8 17438.8 False True 16517.48673843796 16206.70374816637 16227.532394994229 15843.746071287364 15733.726606990538 16061.362367483573 16292.864787826022 15892.403401068466 15149.183471137696 13603.092275160365 13108.2646736047 1.2600818758029961 1.2363729411720534 1.2379619117449316 1.208683717165929 1.2002905799325647 1.2252851744613718 1.242945972904709 1.212395675307809 1.1556971001388663 1.0377492836677358 1.0 13.678189087802293 -9.950280656281745 0.4632042760642185 0.9815272719352668 1.2386288325352295 0.9391681691052335 0.02027669974548875 0.17322985724872525 0.0720464401919534 0.019157889119416474 0.0062651765279604634 1.1212936009771439e-10 9.950280656281745 0.2571015605999627 IIAPPER ddPTM_A549_PD325901_60min_R1 4 IIAPPER 7 0 P60709;P63261;P63267-2;Q562R1;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTBL2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;; 114.59 0.020395 312506500.0 13934.0 13538.8 14229.500000000002 14411.8 15978.1 13875.6 14806.2 14129.800000000001 14213.9 14024.6 15167.3 False True 15348.569422331351 14679.762190422729 15195.199438934662 15301.984154427428 14855.853377452577 13762.601714040513 15369.658043263527 13847.970054386335 13616.539213168731 13139.08436254679 13301.818253436428 1.1538700296379527 1.1035906453337925 1.1423400282144955 1.1503678567006637 1.1168287744132028 1.0346406372290529 1.1554554234939187 1.041058432053739 1.0236599954785126 0.9877660416200923 1.0 13.699335843766388 -8.261915841840624 0.6244239977356657 1.0027098477177818 1.1360684341644782 0.7100930763242477 0.0338502303913196 0.2563410751109354 0.20960312715864904 0.008405896303347545 0.011673208305275531 5.4712197464230746e-09 8.261915841840624 0.1333585864466964 IIAPPERK ddPTM_A549_MK2206_60min_R1 2 IIAPPERK 8 1 P60709;P63261;P63267-2;Q562R1;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTBL2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 93.162 0.0025932 69517000.0 18093.8 19302.9 20143.5 17741.6 24592.0 20673.4 18835.7 18634.5 26575.0 27622.0 26332.0 False True 21147.59108906185 20285.335160647955 23000.151195539464 22088.29279645069 20974.549376825416 22861.04546610771 22257.902876750064 21275.997440762847 20555.80493155466 21382.17101568784 19793.037673771065 1.0684358529305376 1.024872255334979 1.1620324062747749 1.1159627521813493 1.0596932983470264 1.1550043931054728 1.1245319310560067 1.0749233034076897 1.0385371497975968 1.0802874913951501 1.0 14.272705421979232 -8.858035792860273 1.633248487891108 1.0138629071888772 1.101787956662587 0.23391608524384044 0.043610048579114824 0.21730605328472838 1.145608080720666 0.007879245798592423 0.008168263215009328 1.3866415425653883e-09 8.858035792860273 0.08792504947370983 IIAPPERK ddPTM_A549_PD325901_60min_R1 2 IIAPPERK 8 1 P60709;P63261;P63267-2;Q562R1;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTBL2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 95.815 0.0025261 137654000.0 32876.0 34021.0 33403.0 36057.0 40477.0 39978.0 39368.0 37737.0 39211.0 38969.0 40456.0 False True 36213.54731796798 36888.06906670987 35669.92844855649 38284.15899861154 37634.03515806934 39652.43242266366 40866.17078299622 36984.30593089619 37563.09802992555 36508.49068950885 35480.16847171373 1.0206701060858527 1.0396813390589894 1.0053483392277025 1.0790297974242504 1.0607062136154386 1.1175942542177113 1.1518031774729713 1.042393751889358 1.0587068677498648 1.0289830139508762 1.0 15.114725239603558 -2.235009973344854 12.586462567999693 1.045661197490653 1.057193568919579 0.0 0.04533683321931875 0.0 0.0 0.006718244083500121 0.0 0.005820898502294601 2.235009973344854 0.011532371428926158 IIAPS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 IIAPSPVK 8 0 Q9HCS5 Q9HCS5 EPB41L4A Band 4.1-like protein 4A 1 IIAPS(1)PVK;IIAPS(1)PVK 79.148 0.0041486000000000006 55842000.0 7651.5 8466.8 8027.3 7775.3 10689.0 8175.799999999999 7380.0 7795.799999999999 11832.0 11428.7 11966.8 True False 8942.886138785483 8897.723955373245 9165.69184560547 9680.248849046488 9116.662259632676 9040.95772934319 8720.850471732685 8900.87852363621 9152.070891821442 8846.94873242313 8995.113293121814 0.9941938302904682 0.9891730838095125 1.018963469044252 1.076167529368259 1.013512777721633 1.0050965935311156 0.9695097979923336 0.9895237818118797 1.017449207540237 0.9835283274517532 1.0 13.13492573694437 -7.173800983840571 5.014783244417134 1.0034621757037758 1.0203346897588406 0.13871913734664842 0.024774920441839904 0.4700978893790944 20.027405963207098 0.003823296255618395 0.006696333783561485 6.701916554855293e-08 7.173800983840571 0.016872514055064736 IIAPS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 IIAPSPVK 8 0 Q9HCS5 Q9HCS5 EPB41L4A Band 4.1-like protein 4A 1 IIAPS(1)PVK;IIAPS(1)PVK 90.05 0.0026449999999999998 84993000.0 13893.5 12779.6 13904.5 13766.8 15547.7 14214.0 14660.0 15510.0 15343.8 14663.2 16495.1 True False 15303.957892145876 13856.581742010098 14848.142984550901 14617.143969328707 14455.683188653175 14098.245896636674 15217.894322259815 15200.640882640386 14698.953445501811 13737.36304956264 14466.307271054116 1.0579035551642006 0.9578520269465015 1.0263948294711538 1.0104267589128568 0.9992655981791428 0.9745573374378752 1.0519543126744972 1.0507616489700595 1.0160819323196044 0.9496108987709646 1.0 13.820409080158745 -7.728396756087358 24.999822623412634 1.0147360691598348 1.0033245577930625 0.016074343020079818 0.035183442257327446 628.9839083135294 475885.01780887874 0.004418262301841475 0.0065530884644224695 1.868973931685004e-08 7.728396756087358 -0.01141151136677232 IIDAALR ddPTM_A549_PD325901_60min_R1 2 IIDAALR 7 0 H3BRM5;H3BV69;P20674;H3BNX8 H3BRM5 COX5A Cytochrome c oxidase subunit 5A, mitochondrial 0 ; 91.906 0.03419 5522200.0 2299.8 2755.8999999999996 2804.5 2432.6 2790.6 3435.5 2900.8999999999996 2931.5 3190.3999999999996 3103.8 2802.2 False True 2533.274002976723 2988.14936483189 2994.8302348285097 2582.856177164558 2594.5978830473673 3407.5224270363933 3011.29533693339 2873.028932782738 3056.3185829148592 2907.8255383021783 2457.54716460936 1.0308139918768964 1.2159072297222309 1.2186257411277612 1.0509894639499693 1.0557672790218013 1.3865542342818216 1.2253255523631226 1.1690635989236124 1.2436459519183538 1.1832226783588067 1.0 11.263003389323602 -10.883724145579984 1.1101975838948968 0.9990861172097535 1.184450116762654 0.0 0.11157896835117467 0.4925261259235185 1.0691232467707972 0.07091435096372832 0.016703690019160423 1.3070008030479561e-11 10.883724145579984 0.1853639995529005 IIDEVVNK ddPTM_A549_PD325901_60min_R1 1 IIDEVVNK 8 0 O95816;O95816-2 O95816 BAG2 BAG family molecular chaperone regulator 2 0 106.04 0.0053653 1490700.0 1331.3 1167.1 1046.0 1223.8 1851.5 900.12 1365.2 1251.7 1325.1 1391.3 1617.5 False True 1466.4525959487387 1265.4556129378068 1116.9878501089754 1299.3913465485427 1721.4570273282457 892.7897211538344 1417.1534330661045 1226.7338615603464 1269.4106551593782 1303.4530805592558 1418.557754177303 1.033763053799112 0.8920719718399563 0.7874109085934087 0.915994673267377 1.2135262186252052 0.6293643797898173 0.9990100359981375 0.8647754086486205 0.8948600445919643 0.9188579574718814 1.0 10.470209173356144 -10.747277654188116 1.0000540543664562 0.9999816683790462 0.91112590534313 0.0024233238177332472 0.14066779078308667 1.4130233398037075 2.511498501957045 0.08839320261870251 0.022670597356453843 1.7894614454749654e-11 10.747277654188116 -0.08885576303591625 IIEDGDGAGAET(ph)PVIENR ddPTM_A549_MK2206_60min_R1 4 IIEDGDGAGAETPVIENR 18 0 A0A5H1ZRS1;Q15154-5 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR 182.15 1.3930999999999998e-39 33524300.0 3397.42 3865.56 3861.65 2894.51 5266.8 3709.24 3576.26 3553.63 5245.34 5320.64 5365.99 True False 3970.821437055818 4062.3004928582945 4409.290037195867 3603.6650799394906 4492.060696887774 4101.749314805758 4226.020150140755 4057.3679350354455 4057.278865086773 4118.703728655036 4033.4665892100425 0.984468657228547 1.0071486655487332 1.0931762888506855 0.8934411628894319 1.1136972620287768 1.0169290420747203 1.0477389750657198 1.005925757731412 1.0059036750026469 1.0211324768805603 1.0 11.977804590233147 -2.004124106116226 24.555049772526928 1.0113514865445419 0.0004992747205547765 0.0 0.05514604603131113 0.0 0.0 0.006288558887418505 0.0 0.009905488403604792 2.004124106116226 -1.010852211823987 IIEDGDGAGAET(ph)PVIENR ddPTM_A549_PD325901_60min_R1 4 IIEDGDGAGAETPVIENR 18 0 A0A5H1ZRS1;Q15154-5 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR 243.9 1.0145999999999998e-74 46884700.0 8501.849999999999 8341.73 8981.400000000001 9614.210000000001 10306.2 9859.0 9574.15 9837.94 9166.59 9360.630000000001 9610.4 True False 9364.951553268824 9044.716862403979 9590.931813545654 10208.057916244868 9582.32806645983 9778.711572741033 9938.499517425904 9641.714568985368 8781.350099975401 8769.598224304891 8428.381725345009 1.1111209551778432 1.0731261536488774 1.137932775956829 1.2111527750989481 1.1369119694288152 1.1602122318849708 1.1791705503251966 1.143957984246459 1.0418785463369535 1.0404842246209387 1.0 13.041039940629243 -8.838381609438052 3.1366500420897587 1.017302224525076 1.1459132085126842 0.6932229514917652 0.03465714130252345 0.09766953558960645 1.8489520027983006 0.006817832159337246 0.007237471146237236 1.4508362246577625e-09 8.838381609438052 0.12861098398760817 IIEQLS(ph)PQAATSR ddPTM_A549_MK2206_60min_R1 1 IIEQLSPQAATSR 13 0 Q03468;P0DP91;D6R9X7 Q03468 ERCC6 DNA excision repair protein ERCC-6 1 IIEQLS(0.998)PQAAT(0.002)S(0.001)R 69.37899999999999 0.0033438 4762200.0 2650.5 3317.0 2790.5 2143.8 3781.2 2245.8 2849.7 2590.8 3615.6 4076.9 4263.4 True False 3097.8396014965588 3485.821131947492 3186.234860434026 2669.0310962388385 3224.9904889253526 2483.4490653586104 3367.453602885726 2958.0538339922377 2796.6723729267746 3155.92545846998 3204.6801161459643 0.9666610985255231 1.0877282616711323 0.9942442755459409 0.8328541381686132 1.0063377223445984 0.7749444485414894 1.0507924288354613 0.9230418409278471 0.87268378482971 0.984786419889353 1.0 11.64596464216701 -6.009491237440042 24.56764092416694 0.9319730112593347 1.0306425938549506 0.18675536335833431 0.08118161204656915 415.51579430847204 1075557.3148050916 0.010773520844709658 0.031067862109159156 9.78382694962967e-07 6.009491237440042 0.09866958259561587 IIETMS(ph)SSK ddPTM_A549_PD325901_60min_R1 2 IIETMSSSK 9 0 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 IIET(0.003)MS(0.986)S(0.01)SK;IIET(0.001)MS(0.896)S(0.1)S(0.002)K 110.39 6.4866e-05 3713100.0 4391.0 3820.2 3926.5 4943.0 5621.0 4940.9 4739.2 5305.9 5203.8 5686.2 6005.7 True False 4836.771087516649 4142.141660993064 4192.975901962612 5248.317883632496 5226.2003513972795 4900.662948550176 4919.552849389748 5200.069662101975 4985.102382701964 5327.172361587039 5267.036973269015 0.918309689501701 0.7864272990706236 0.7960786915380658 0.996445992361261 0.9922467561782863 0.9304402026076064 0.9340266404730402 0.9872855817213912 0.946471879351159 1.0114173089392042 1.0 12.362775871544242 -6.263348039294448 24.998088107206236 0.9714612248105158 0.8288874301265639 0.7030754352476232 0.04078970300763306 65.07901650433425 852359.9765918934 0.005518168451694539 0.01344560991645345 5.45320671352373e-07 6.263348039294448 -0.14257379468395193 IIFEDDR ddPTM_A549_MK2206_60min_R1 2 IIFEDDR 7 0 D6RC06;D6REP8;D6RE99;D6RD60;P49773 D6RC06 HINT1 Histidine triad nucleotide-binding protein 1 0 ; 107.43 0.025613 6994100.0 1847.87 1987.8 1891.76 1709.8400000000001 2696.6 1844.73 1752.2 2011.1599999999999 3083.2 2595.7 2699.8999999999996 False True 2159.745279916035 2088.970529419726 2160.040014181929 2128.7508767576355 2299.9337121644185 2039.938104167331 2070.5520591558306 2296.248088919188 2384.860122858676 2009.3295672080574 2029.4403165507565 1.0642073394830085 1.029333315389214 1.0643525688171704 1.048934949895776 1.1332847255510294 1.0051727501079788 1.0202576751185015 1.1314686468936908 1.1751319333755978 0.9900904948134275 1.0 10.986866197359749 -8.251116164538786 24.396120117984204 1.0886695192875124 1.0529887837665122 0.01007514238484597 0.05840592102980217 1342.7693093963196 3173271.879760415 0.011340985983040144 0.014563463898323888 5.608979276976387e-09 8.251116164538786 -0.03568073552100026 IIFEDDR ddPTM_A549_PD325901_60min_R1 2 IIFEDDR 7 0 D6RC06;D6REP8;D6RE99;D6RD60;P49773 D6RC06 HINT1 Histidine triad nucleotide-binding protein 1 0 ; 130.77 0.015777 12995900.0 3772.5 4129.5 3892.3 3701.7 4833.700000000001 4786.6 4062.7 4339.0 4810.5 4215.8 4149.6 False True 4155.481422832285 4477.507457481508 4156.454884301303 3930.3456018293373 4494.19758735973 4747.619516592174 4217.308271694743 4252.4552411203495 4608.331413964372 3949.6136685270694 3639.2255064816936 1.1418587321481195 1.2303462507357075 1.1421262235325593 1.0799950689588045 1.2349324270659447 1.3045686529005578 1.1588477449895442 1.1685055607426509 1.2662945469459472 1.085289620413067 1.0 11.82941573595235 -10.912205438714565 1.1239898964735366 0.9982258991012692 1.197307565475094 0.41878759061254656 0.06534517159481516 0.30039523214400726 0.6641510155690494 0.04729675142668023 0.010814900384390098 1.224037043661853e-11 10.912205438714565 0.19908166637382474 IIGEDS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 IIGEDSPSR 9 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 IIGEDS(0.998)PS(0.002)R;IIGEDS(0.976)PS(0.024)R 128.35 5.125e-05 29742000.0 2965.0 3091.2 2711.8999999999996 2251.2 4399.299999999999 3219.7 3034.9 3001.2 4253.700000000001 4010.7 3879.0 True False 3465.4195127097896 3248.5288764172715 3096.4881985346865 2802.744101060208 3752.168797717468 3560.4065169361133 3586.3020456180957 3426.6292907895245 3290.2437417630895 3104.6800844478767 2915.737245046256 1.1885225661528405 1.1141363584583686 1.061991509624374 0.9612471445504839 1.2868679453514826 1.2210999200922956 1.2299812171728122 1.1752188221388118 1.12844315699335 1.0648010515085433 1.0 11.509645000092156 -10.19033827746469 0.8464883642661357 1.0077985777880236 1.150982027798297 0.2158554664550304 0.08563805136711893 0.5643639097148573 0.7926648643696373 0.04360278615908298 0.01759997192256401 6.451515165997077e-11 10.19033827746469 0.14318345001027333 IIGEDS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 IIGEDSPSR 9 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 IIGEDS(0.989)PS(0.011)R;IIGEDS(1)PSR 153.1 1.7606e-05 43592000.0 8599.599999999999 7711.8 8939.0 8504.0 9765.8 8109.8 8387.6 9215.0 8804.5 8998.6 9266.2 True False 9472.625061309083 8361.70045056445 9545.654294573731 9029.27276601472 9079.883898181033 8043.756477595621 8706.794707870828 9031.199595972348 8434.477483473505 8430.426860289312 8126.516143281438 1.1656440342077625 1.0289403605599738 1.1746305706247269 1.1110877781839676 1.1173156784642317 0.9898160953320398 1.0714055758160441 1.1113248822422943 1.0378958627242343 1.0373974174971805 1.0 12.988421282716784 -7.87214083514161 0.19489553719208008 0.9740918437257772 1.1667897169585615 0.3318081876536928 0.049491726538825415 2.601351340374003 0.3144913686214142 0.09689370868696068 0.16805196775243147 1.3423295933353025e-08 7.87214083514161 0.1926978732327843 IIGEDS(ph)PSRLDR ddPTM_A549_MK2206_60min_R1 4 IIGEDSPSRLDR 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 IIGEDS(0.812)PS(0.188)RLDR;IIGEDS(0.5)PS(0.5)RLDR;IIGEDS(0.896)PS(0.104)RLDR;IIGEDS(0.978)PS(0.022)RLDR 115.06 2.2579000000000002e-05 239121000.0 12603.1 13013.6 7899.099999999999 7027.0 9718.7 6646.599999999999 6109.099999999999 7049.4400000000005 10381.7 11825.9 13403.8 True False 14730.195163788463 13675.936654420231 9019.311157876517 8748.615315454015 8289.092104284044 7349.938800343993 7219.044392528749 8048.719708004575 8030.261526168248 9154.420976555744 10075.266533939415 1.4620154329583752 1.3573771580485383 0.8951933060524185 0.8683259431384311 0.8227169054398227 0.7295031625798764 0.7165115054982186 0.79885923423383 0.7970272050985063 0.9086033551289465 1.0 13.298530384268586 -5.7352892963382684 3.807580601894136 0.8611700170202606 1.4400479583377561 0.8843620654018463 0.07986764449852549 0.06701865408355961 2.0425339790913974 0.015012507210740302 0.062267866211943634 1.8395462173646593e-06 5.7352892963382684 0.5788779413174955 IIGEDS(ph)PSRLDR ddPTM_A549_PD325901_60min_R1 2 IIGEDSPSRLDR 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 IIGEDS(0.932)PS(0.068)RLDR;IIGEDS(0.902)PS(0.098)RLDR 137.93 5.2436e-09 346170000.0 5965.1 5200.7 5607.5 6116.299999999999 6341.299999999999 6298.5 6401.700000000001 6248.0 5714.0 5698.9 6460.8 True False 6570.6725607254775 5638.9812408582375 5988.058670636787 6494.08995987486 5895.908964297382 6247.207104261019 6645.320196644651 6123.378738538821 5473.860450970251 5339.0704814196415 5666.162558385609 1.159633613229335 0.9952028701528965 1.0568102501356564 1.1461178342410885 1.0405470904769156 1.1025463953580885 1.1728078974384422 1.0806923866800393 0.9660613147904199 0.9422727333366231 1.0 12.468156276920386 -8.71872718128304 6.762749442234032 0.9839787843729059 1.0929624944773582 0.5287856366046371 0.052023020509604966 0.11877127000119003 13.838471315077324 0.008442586445602114 0.00951455401519473 1.911053382971137e-09 8.71872718128304 0.10898371010445229 IIGEKS(ph)FRR ddPTM_A549_PD325901_60min_R1 2 IIGEKSFRR 9 2 O94806;H0Y5M6;Q15139;F8WBA3;Q9BZL6-2;Q9BZL6;Q9BZL6-3 O94806;Q15139;Q9BZL6-2 PRKD3;PRKD1;PRKD2 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase;Serine/threonine-protein kinase D2 1 IIGEKS(1)FRR;IIGEKS(1)FRR 61.353 0.0015757999999999998 4644300.0 1442.02 1543.91 1502.87 1077.61 1988.13 1738.6 1381.12 1294.27 1690.75 1491.6999999999998 1391.08 True False 1588.4128088409834 1674.0207140526165 1604.863795691467 1144.1715222701214 1848.4906074761568 1724.441418030992 1433.6792773778636 1268.454769514827 1619.6936572415052 1397.5138074248855 1219.985978782667 1.3019926757075866 1.372163896279363 1.3154772461342883 0.9378562886532555 1.5151736492255654 1.4134928171483443 1.1751604545557361 1.0397289735907649 1.327633010059408 1.1455162860308938 1.0 10.252648851747827 -13.707479432130208 0.3046998077553179 1.4985427919477265e-11 1.290503547597826 0.15446868028534666 0.16209014692622284 20.527707540222714 0.5510266578471674 12.493150736183606 0.05793508276941214 1.961194053996166e-14 13.707479432130208 1.2905035475828406 IIGS(ph)PETK ddPTM_A549_PD325901_60min_R1 2 IIGSPETK 8 0 E9PMS6;H0YDG6 E9PMS6 LMO7 1 IIGS(0.885)PET(0.115)K;IIGS(0.976)PET(0.024)K 81.33800000000001 0.0037411000000000002 8433700.0 3798.0 4248.1 3961.6000000000004 4307.5 5213.0 4775.3 4278.8 4501.4 5106.0 5263.799999999999 4725.2 True False 4183.5701640601765 4606.102295708249 4230.457999036056 4573.56449195771 4846.856863873693 4736.411540045668 4441.632075449202 4411.616045720014 4891.412576593301 4931.442769674273 4144.030355510725 1.0095413896997332 1.1115030297939448 1.0208559388109695 1.1036513006898685 1.169599749053081 1.1429480804230103 1.071814560803766 1.0645713634441538 1.1803515314719422 1.1900112563404486 1.0 12.016818855636455 -5.252202083778532 22.982128668755216 1.0917906348528537 1.0095412509843302 0.13580773798424906 0.06126552142036505 723.4390424913541 1799769.996772848 0.00956689793281518 0.1523487383208514 5.594971984224815e-06 5.252202083778532 -0.08224938386852343 IIGVHQEDELLECLS(ph)PATSR ddPTM_A549_PD325901_60min_R1 1 IIGVHQEDELLECLSPATSR 20 0 Q93009;H3BND8;A0A669KBL1;Q93009-3 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase 1 IIGVHQEDELLECLS(0.863)PAT(0.112)S(0.025)R 87.102 1.6016999999999998e-06 1330100.0 930.94 596.61 716.1 761.31 907.19 865.96 827.77 935.63 981.27 758.4 808.59 True False 1025.4483434781941 646.8884185029773 764.698852259118 808.3343896395419 843.4721040355994 858.9079088681232 859.2712403231247 916.9681256624639 940.0306343583445 710.5144945706462 709.1385560743284 1.4460479333614342 0.9122172429659481 1.078348999231352 1.1398821608492773 1.1894320183419709 1.2111989984339486 1.21171135451992 1.2930732898499342 1.3255951552855845 1.001940295707421 1.0 9.469923727862563 -6.610426766571262 4.969501020699797 1.178594654300026 1.1202603323530453 0.002532126178412142 0.15114889371480875 0.7974301514368423 33.864761603264604 0.023206649054623964 0.04934975763791684 2.4522979406324147e-07 6.610426766571262 -0.05833432194698074 IIKPFPAPQT(ph)PGR ddPTM_A549_MK2206_60min_R1 2 IIKPFPAPQTPGR 13 1 P78536 P78536 ADAM17 Disintegrin and metalloproteinase domain-containing protein 17 1 IIKPFPAPQT(1)PGR;IIKPFPAPQT(1)PGR 93.75399999999999 6.9167e-05 92124000.0 6912.5 7338.9 7469.299999999999 7669.4 9206.8 7595.9 7088.1 7251.0 10613.5 10192.9 9540.3 True False 8079.161005600817 7712.418663023657 8528.559055022355 9548.403344292443 7852.49191617421 8399.693096249659 8375.916020147492 8278.851455256177 8209.559196276778 7890.316810723505 7171.180211114923 1.1266152526858235 1.0754741110912045 1.1892824896247305 1.3314967778236781 1.0950069144829595 1.1713125104889446 1.1679968671217182 1.1544614988791422 1.1447988970563627 1.100281484837595 1.0 12.807994857508886 -10.428755252444624 0.554938399716255 0.9833193777451679 1.1685251571320296 0.2420614305171399 0.06875934575908238 0.7378419537203623 0.3668057609336799 0.06786651148835798 0.014912124687848352 3.726016275176564e-11 10.428755252444624 0.18520577938686178 IIKPFPAPQT(ph)PGR ddPTM_A549_PD325901_60min_R1 2 IIKPFPAPQTPGR 13 1 P78536 P78536 ADAM17 Disintegrin and metalloproteinase domain-containing protein 17 1 IIKPFPAPQT(1)PGR;IIKPFPAPQT(1)PGR 100.77 5.9151e-05 128492000.0 9231.7 10248.4 10180.0 10836.2 12391.0 10845.599999999999 10742.5 12494.4 12260.2 12777.7 12406.8 True False 10168.89538798165 11112.068634762934 10870.876017312965 11505.527463204215 11520.698906629379 10757.277029447214 11151.31171602156 12245.189390332824 11744.946429993965 11970.91384134408 10880.842253185145 0.9345687724684102 1.02125077969126 0.9990840565794195 1.0574114756452981 1.058805801844699 0.988643781348658 1.0248574013429192 1.1253898462454315 1.0794151920138233 1.1001826478864574 1.0 13.409502615132462 -3.9005340741376444 0.8642455462336252 1.0424209646495954 9.095611898604452e-10 0.3967667548200712 0.04089816463654261 17.09329020783212 1.4640839116573066 0.006581155462534848 28.68761058588062 0.00012573781983626336 3.9005340741376444 -1.0424209637400343 IILDLIS(ph)ESPIKGR ddPTM_A549_MK2206_60min_R1 1 IILDLISESPIKGR 14 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IILDLIS(0.587)ES(0.413)PIKGR 87.148 3.5007e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IILDLIS(ph)ESPIKGR ddPTM_A549_PD325901_60min_R1 1 IILDLISESPIKGR 14 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IILDLIS(0.667)ES(0.333)PIKGR 87.148 3.5007e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IILDLISES(ph)PIKGR ddPTM_A549_MK2206_60min_R1 1 IILDLISESPIKGR 14 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IILDLIS(0.129)ES(0.871)PIKGR 66.965 0.00076546 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IILDLISES(ph)PIKGR ddPTM_A549_PD325901_60min_R1 1 IILDLISESPIKGR 14 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IILDLISES(1)PIKGR 212.7 6.7765e-39 84164000.0 4254.6 3704.4 4093.6 5189.5 5386.3 5043.8 5549.6 5020.6 5132.3 5140.0 5141.2 True False 4686.523859929019 4016.5827885929284 4371.416312816539 5510.0436287903785 5007.98486972624 5002.724965066562 5760.793064857643 4920.460194415492 4916.607279054015 4815.459522802113 4508.864992751995 1.0394021261365356 0.8908190409448031 0.9695159025261558 1.2220467096814343 1.1106974544096089 1.1095308848476164 1.2776592499704746 1.0912857675546146 1.0904312475439975 1.0679981615202427 1.0 12.138548597209448 -6.0381343933854295 24.60075310447938 1.0834855046127811 0.956374723261389 0.34597789177015525 0.0835743407857507 447.089433159269 288420.22689261544 0.013153727463506093 0.034811451777449876 9.159370075346709e-07 6.0381343933854295 -0.1271107813513922 IILLAEGR ddPTM_A549_MK2206_60min_R1 1 IILLAEGR 8 0 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 84.244 0.0088641 1174200.0 374.61 447.43 407.84 431.56 729.38 475.24 492.09 406.12 899.37 689.88 643.19 False True 437.8350096648282 470.2022758719527 465.6778446441191 537.2922193734644 622.0891682038439 525.5295813612196 581.4963832838672 463.68875369033805 695.6641309987705 534.0356288575313 483.46817185906195 0.9056128927396352 0.972560973484359 0.9632026920272034 1.1113290401463964 1.2867220727514448 1.0869993351173883 1.202760423810033 0.9590884792008812 1.438903678651191 1.1045931458197635 1.0 8.917277105717735 -6.348365184886759 3.1132721499841574 1.1879516453697614 0.9453945120355026 0.31105857980619056 0.12828760864569513 0.2625477988502944 4.8956207848507125 0.02399047186360587 0.0624074121190614 4.4836821232255084e-07 6.348365184886759 -0.24255713333425877 IILLAEGR ddPTM_A549_PD325901_60min_R1 2 IILLAEGR 8 0 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ; 81.297 0.010384000000000001 5227900.0 1423.36 1681.73 1381.87 1157.52 1994.81 2014.6 1540.03 1502.4699999999998 1908.9099999999999 1740.27 1723.51 False True 1567.8584593777498 1823.4552891319483 1475.6520080593593 1229.017381481345 1854.701427320905 1998.1937655385018 1598.6366843867522 1472.5020571850857 1828.6851511133395 1630.389055203664 1511.5291962300612 1.0372664076143423 1.2063645834164958 0.9762643101700027 0.813095363653355 1.227036455496035 1.3219683553068253 1.0576287169139358 0.9741803604308048 1.2098245642057752 1.0786355032175718 1.0 10.561793130547667 IIMTAAAK ddPTM_A549_MK2206_60min_R1 1 IIMTAAAK 8 0 P30838;C9JMC5;A8MYB8;E9PNN6;I3L3I9;C9JKT2 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 50.966 0.023278 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IIMTAAAK ddPTM_A549_PD325901_60min_R1 2 IIMTAAAK 8 0 P30838;C9JMC5;A8MYB8;E9PNN6;I3L3I9;C9JKT2 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 98.99700000000001 0.001469 4416700.0 3846.5 3218.6 3820.9 3044.8 4555.0 4169.3 3246.5 3778.0 4605.3 3704.0 4079.6 False True 4236.993848356363 3489.8427176776827 4080.209250938225 3232.8703807574807 4235.072513896926 4135.346603127012 3370.047334052965 3702.644826216334 4411.755256362147 3470.1288078714038 3577.835062715133 1.1842339778349118 0.9754062600720685 1.140412897581101 0.9035828438396858 1.1836969674848652 1.1558237120044312 0.9419236144148907 1.0348841579652042 1.2330795520278042 0.9698962492804256 1.0 11.80487116571103 IINEPTAAAIAYGLDKK ddPTM_A549_MK2206_60min_R1 2 IINEPTAAAIAYGLDKK 17 1 P11142;E9PKE3;P11142-2;E9PN89;E9PI65;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 176.42 3.5835e-30 25494000.0 3344.2 3682.7999999999997 4046.1000000000004 3486.4 4782.3 3860.8 3708.6000000000004 3756.5 4772.6 5089.9 5048.8 False True 3908.6192021598927 3870.238789489365 4619.897820749729 4340.568156510441 4078.830005074505 4269.347293408374 4382.404615104044 4288.995378798767 3691.6137202761147 3940.088054910923 3795.0436202086976 1.0299273455900224 1.019814046110103 1.2173503872652909 1.1437465786682433 1.0747781615353875 1.124979768525979 1.1547705517184663 1.1301570701216093 0.9727460576785426 1.0382194380928482 1.0 11.889900752726309 -8.7619063518999 24.9997380498696 0.9871300766988872 1.1140670472965009 0.4205403082584639 0.05565516789064676 7.0745353923365695 378738.6869258368 0.009427516550737425 0.010339037721451196 1.7301894044394256e-09 8.7619063518999 0.12693697059761366 IINEPTAAAIAYGLDKK ddPTM_A549_PD325901_60min_R1 2 IINEPTAAAIAYGLDKK 17 1 P11142;E9PKE3;P11142-2;E9PN89;E9PI65;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 164.68 1.0266e-22 45264000.0 6162.3 6479.5 6758.8 6968.9 7589.700000000001 8186.0 7474.3 7430.1 8255.9 7510.4 7779.299999999999 False True 6787.892159554508 7025.550204807228 7217.492811966099 7399.353125479771 7056.625655043578 8119.335930059655 7758.738576593899 7281.900826699313 7908.933233665614 7036.192062267115 6822.495417045749 0.9949280643846553 1.0297625392688654 1.0578963225000437 1.0845523042775178 1.034317390292834 1.1900830170986703 1.1372288440398188 1.067336858666956 1.1592434659472899 1.0313223581927888 1.0 12.736083805043497 -5.617490267740969 1.1768545099872474 1.0870197542091917 0.9807688178923588 0.23783070648237692 0.05405326054522629 1.3137364680208883 2.226027390773629 0.009976562880817327 0.1454003249871094 2.4127355998333558e-06 5.617490267740969 -0.10625093631683291 IINEPTAAAIAYGLDKR ddPTM_A549_PD325901_60min_R1 1 IINEPTAAAIAYGLDKR 17 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 197.38 4.3547e-48 7793400.0 3072.4 3302.4 3409.0 3022.1 3449.4 3438.1 3509.4 3913.2 2974.9 3408.8 3509.7 False True 3384.307786218665 3580.7048377738092 3640.355239982312 3208.7682533129214 3207.126043783984 3410.1012534984216 3642.9521374173646 3835.1481561539867 2849.8752984934213 3193.5677862505518 3078.0291498213815 1.0995047874757966 1.1633108926150353 1.1826903069431822 1.0424749400112494 1.0419414137030165 1.1078846520008787 1.1835339953257966 1.245975255424901 0.9258766437149564 1.0375365634324403 1.0 11.587791179129905 -8.778663322900485 24.999994928290132 0.964997291133062 1.130792841490184 0.497929351754715 0.06397112832774429 124.87935671459171 181257.6066241501 0.01149067305239216 0.012247030590729851 1.664702673850532e-09 8.778663322900485 0.165795550357122 IINEPTAAAIAYGLDR ddPTM_A549_MK2206_60min_R1 2 IINEPTAAAIAYGLDR 16 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 0 ; 200.16 6.427e-39 7036700.0 3996.0 3843.1 3213.8 3123.3 4745.8 4011.9 3862.8 3506.2799999999997 5938.9 5309.6 6038.7 False True 4670.427107179871 4038.6973747927063 3669.5651655484266 3888.508640210263 4047.699106723245 4436.43659511631 4564.620759106917 4003.3059275321525 4593.748632474509 4110.157672322649 4539.12413035855 1.0289269412006472 0.889752573140952 0.808430230185964 0.8566649707160807 0.8917357160716187 0.9773772357192336 1.0056170811848568 0.881955595961181 1.0120341503222217 0.9054957640028195 1.0 12.148198226518863 -7.30032447397717 3.8766243810786545 0.9944105690803309 0.887152674067583 0.1293214496627353 0.0662540543019939 0.17649483555338424 5.739233504603955 0.00919170821460068 0.015370261466819836 5.008129219861612e-08 7.30032447397717 -0.10725789501274785 IINEPTAAAIAYGLDR ddPTM_A549_PD325901_60min_R1 2 IINEPTAAAIAYGLDR 16 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA6 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 0 ; 257.04 2.8310999999999995e-77 15093200.0 5805.8 5843.700000000001 6645.5 6198.9 7329.6 7417.0 6842.4 7570.4 7598.5 7725.700000000001 7617.700000000001 False True 6395.200541995939 6336.169107466933 7096.5035926378505 6581.791974276647 6814.794181747294 7356.598411098514 7102.791276304948 7419.402433136085 7279.161469495532 7237.897983523794 6680.771192578943 0.95725483745047 0.9484188164541848 1.0622282051091207 0.9851844621752287 1.020061005728983 1.1011600605735885 1.0631693664639779 1.1105607749862203 1.0895690422059787 1.0833925867067133 1.0 12.705798933991757 -5.654688858879658 0.882757086787678 1.0523714788460075 0.9197695879990323 0.4740107917473263 0.04049477276730617 1.1572507549205844 0.9558416063607394 0.007384802296234023 0.1289192456569317 2.2146808027198804e-06 5.654688858879658 -0.13260189084697516 IINLGPVHPGPLS(ph)PEPQPMGVR ddPTM_A549_MK2206_60min_R1 2 IINLGPVHPGPLSPEPQPMGVR 22 0 Q86T03;Q86T03-2 Q86T03 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase 1 IINLGPVHPGPLS(1)PEPQPMGVR;IINLGPVHPGPLS(1)PEPQPMGVR 49.618 0.0028445999999999996 13401400.0 2682.2 3645.1000000000004 3093.7 3005.4 4715.1 3385.2 3561.0 3148.3 5408.4 4720.4 5105.9 True False 3134.8897865059685 3830.6200205190885 3532.433179618257 3741.723134917532 4021.515036055199 3743.419617086104 4207.987605669389 3594.581166264384 4183.4060354400835 3654.058361539822 3837.964114328866 0.8168106040392611 0.9980864610530467 0.9203924462008587 0.9749239501609662 1.0478250750289857 0.9753659767453833 1.0964113994602132 0.936585402881746 1.090006553167479 0.952082472031867 1.0 11.906125506794176 -3.6392606390514364 0.4849680186681154 1.0370874525101004 1.2649099284581906e-14 0.39988057291818513 0.0589982837463806 10.015078494744436 0.4662140315638708 0.010201511479613234 8.456545356271638 0.00022947710426311023 3.6392606390514364 -1.0370874525100877 IINLGPVHPGPLS(ph)PEPQPMGVR ddPTM_A549_PD325901_60min_R1 3 IINLGPVHPGPLSPEPQPMGVR 22 0 Q86T03;Q86T03-2 Q86T03 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase 1 IINLGPVHPGPLS(1)PEPQPMGVR;IINLGPVHPGPLS(1)PEPQPMGVR;IINLGPVHPGPLS(1)PEPQPMGVR 65.071 0.00025502 10514500.0 5114.7 5288.3099999999995 5294.83 5315.07 6341.5 6011.6 5860.200000000001 6579.9 5907.6 6142.700000000001 6539.1 True False 5633.940578756866 5733.974443025558 5654.169004199335 5643.369802500215 5896.094916987347 5962.643522739628 6083.213117824486 6448.658732668304 5659.324116232387 5754.848873680261 5734.832154770207 0.9824072312335383 0.9998504382130982 0.9859345228606601 0.9840514334505999 1.0281198748045315 1.039724156142901 1.060748240515548 1.1244720958928744 0.9868334353124855 1.0034903757197853 1.0 12.48553554718493 -6.7484625231988105 24.714805722694077 1.0143680661955683 0.9887511261055587 0.13869069617806384 0.038591619440542985 488.21699620545917 929816.7877698129 0.006489641273488822 0.013440074580164421 1.7845859801086952e-07 6.7484625231988105 -0.025616940090009588 IIPELVGS(ph)PTQSTSSR ddPTM_A549_MK2206_60min_R1 2 IIPELVGSPTQSTSSR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 IIPELVGS(0.965)PT(0.027)QS(0.002)T(0.002)S(0.002)S(0.002)R;IIPELVGS(0.315)PT(0.315)QS(0.063)T(0.103)S(0.103)S(0.103)R 89.624 1.1285e-05 11586300.0 1371.8899999999999 1251.3899999999999 1574.6 1171.1100000000001 2443.8 1707.8899999999999 1527.4099999999999 1554.6399999999999 2484.1000000000004 2064.6800000000003 2437.8999999999996 True False 1603.4314925097583 1315.0804058811493 1797.901957082751 1458.0320025731257 2084.320257282285 1888.617786194371 1804.9206258847182 1775.0149808853212 1921.4553162925654 1598.2673540174642 1832.5021473828986 0.8749956963486841 0.717641945336485 0.9811186085923217 0.7956509107808822 1.1374176342761848 1.030622413671719 0.9849487098623207 0.9686291409919066 1.0485419179653928 0.8721776158898594 1.0 10.839599173616996 -6.748047382982069 24.999994784947763 1.023515551442021 0.8433558350443766 0.45335184654368654 0.08510210320090184 117.71300683685205 219743.7104996186 0.0095158397389137 0.01972052276087882 1.7862926737085413e-07 6.748047382982069 -0.1801597163976445 IIPELVGS(ph)PTQSTSSR ddPTM_A549_PD325901_60min_R1 2 IIPELVGSPTQSTSSR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 IIPELVGS(0.561)PT(0.353)QS(0.012)T(0.015)S(0.023)S(0.036)R;IIPELVGS(0.396)PT(0.396)QS(0.055)T(0.043)S(0.043)S(0.067)R 109.35 5.6082e-07 19451800.0 2326.5 2797.4 2339.5 1947.96 2656.3 2493.0 2681.8 2337.7 2448.8 2740.2 3059.0 True False 2562.6845673212197 3033.146715476156 2498.272538556354 2068.2810650618553 2469.730651737519 2472.6978345515163 2783.85736653727 2291.072739609826 2345.885451931388 2567.183304354543 2682.7623925986845 0.955240976387346 1.1306057979059667 0.9312313850263785 0.7709520122870047 0.9205923933297685 0.9216984110755753 1.0376831635248394 0.8539976353964599 0.8744290804147671 0.9569178811500393 1.0 11.389503568034478 -5.8586916419045085 10.167900047391658 0.9257443659507606 1.0426761043697543 0.27296526435514357 0.07756916373957842 0.3213716598055111 30.612026882040137 0.011197102864554725 0.03490486178548705 1.3845490886462112e-06 5.8586916419045085 0.11693173841899374 IIS(ph)PGSSTPSSTR ddPTM_A549_MK2206_60min_R1 2 IISPGSSTPSSTR 13 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IIS(0.791)PGS(0.16)S(0.047)T(0.002)PSSTR;IIS(0.999)PGS(0.001)STPSSTR 113.69 2.1154e-05 13584900.0 12120.0 12590.1 10854.0 9836.3 15119.7 11807.0 10504.2 11087.5 17431.1 16069.2 17861.4 True False 14165.559694449468 13230.882313334982 12393.260410374814 12246.193941568285 12895.612158945487 13056.408903147709 12412.677171432868 12659.187079044676 13482.983681746842 12439.156559455907 13425.921430438044 1.0550903167312289 0.9854729436550338 0.9230845327515419 0.9121306127864575 0.9605010893114354 0.9724776784070396 0.9245307471628696 0.9428914912569727 1.0042501553136929 0.926503005689797 1.0 13.712733484334109 -8.770788563534408 24.77953996275652 1.0020070225944733 0.9568911947345936 0.0 0.04350074375983843 190.69072784453292 505414.7807031104 0.006523287420274932 0.0069912001914893915 1.6951628904057584e-09 8.770788563534408 -0.045115827859879665 IIS(ph)PGSSTPSSTR ddPTM_A549_PD325901_60min_R1 1 IISPGSSTPSSTR 13 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IIS(0.989)PGS(0.008)S(0.003)TPSSTR 100.69 0.00015018 11022000.0 5266.8 6811.2 5439.4 6648.3 7012.5 6893.5 5875.4 6002.1 6009.5 7435.7 7649.2 True False 5801.481658786767 7385.203727908476 5808.55039376937 7058.950391615196 6519.966191811675 6837.36162153264 6098.991562142246 5882.38340694364 5756.941613599185 6966.208633015503 6708.396892273899 0.8648089479422973 1.1008895040801865 0.8658626624282044 1.0522559271567595 0.971911217614563 1.0192243737706204 0.9091578301168334 0.876868721604474 0.858169501006938 1.0384311997160645 1.0 12.711752330984835 -7.7748334482516634 24.94888237758919 0.9245908933056092 0.9825353305701798 0.05385591303434045 0.08167184004371209 392.2329615023933 730603.5378443358 0.01221994898991797 0.016935293964248248 1.6794479622147965e-08 7.7748334482516634 0.05794443726457066 IIS(ph)VTPVK ddPTM_A549_MK2206_60min_R1 1 IISVTPVK 8 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.5)VT(0.5)PVK 131.52 0.001073 12700000.0 3400.8 4004.4 3345.6 3263.4 4665.2 4473.8 3430.3 4204.4 5245.1 5630.2 5612.9 True False 3974.771898422751 4208.206855824705 3820.056387410172 4062.9331464995953 3978.9552599530725 4947.214546531908 4053.5411074775934 4800.386575434989 4057.093224703568 4358.33390965628 4219.062021840711 0.9420984754067729 0.9974271139035613 0.9054278812766874 0.9629944109536936 0.943090013693877 1.1725863523507805 0.9607683144959069 1.1377852590421638 0.9616102355692608 1.0330101541751706 1.0 12.042706580549366 IIS(ph)VTPVK ddPTM_A549_PD325901_60min_R1 1 IISVTPVK 8 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.5)VT(0.5)PVK 111.61 0.0015034 129050000.0 6497.3 6637.7 6183.7 5565.3 7385.5 5318.8 6412.6 7259.3 6238.6 6150.3 7513.1 True False 7156.901112940541 7197.082274010174 6603.363067608862 5909.055941286654 6866.767958591822 5275.485456242519 6656.635002109367 7114.507566689321 5976.413337315893 5761.969008383234 6589.036329464914 1.0861832831208174 1.0922814679023993 1.0021743298151025 0.8968012385760392 1.0421505687994077 0.8006459810597119 1.010259265431906 1.0797493306987245 0.9070238861167773 0.8744782575589707 1.0 12.685851765925154 -5.876299089524033 3.8361736170077543 0.9594882892610122 1.0898384498432645 0.31731018100979946 0.07680116781389354 0.19007283283007215 5.18098820207375 0.009842067448279515 0.03464560804037772 1.3295384772849868e-06 5.876299089524033 0.13035016058225235 IISNASCTTNCLAPLAK ddPTM_A549_PD325901_60min_R1 1 IISNASCTTNCLAPLAK 17 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 196.93 1.2457e-47 3344100.0 2033.1 2281.0 2906.9 1860.0 1528.0 1817.1 2377.2 2128.6 1414.4 2127.1 2337.9 False True 2239.4988153108857 2473.2278751701974 3104.1797146097338 1974.887975633511 1420.678551313831 1802.3021400575847 2467.665646853754 2086.1434031456038 1354.9576867084934 1992.794542986844 2050.353121169161 1.0922503017596643 1.2062448412592963 1.5139732188373753 0.9631940738614732 0.6928945734497312 0.8790203606634687 1.2035320264475375 1.0174556673223363 0.6608411364457375 0.9719274803993295 1.0 11.001656683313536 -6.454742677018433 7.738470499112467 0.8709359411028157 1.2622207925055073 0.42986367509826806 0.17329076936841617 0.21422919579686064 21.946385050437353 0.02740589362421154 0.06374415737309197 3.509597588461064e-07 6.454742677018433 0.39128485140269165 IISPGSST(ph)PS(ph)STRSPPPGRDESYPR ddPTM_A549_PD325901_60min_R1 1 IISPGSSTPSSTRSPPPGRDESYPR 25 2 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 2 IIS(0.072)PGS(0.303)S(0.304)T(0.328)PS(0.311)S(0.266)T(0.246)RS(0.165)PPPGRDES(0.004)YPR 42.536 0.031754000000000004 23017000.0 3001.6 2723.8 2385.7 3017.3 2622.1 2934.3 2623.6 2954.0 2822.9 3444.0 3346.5 True False 3306.320222338868 2953.3441851769317 2547.6079483795247 3203.671768214512 2437.9327417539257 2910.4040336640646 2723.4425336890067 2895.0801526318305 2704.2633298991823 3226.545252243282 2934.9017152113424 1.1265522811896886 1.006283845850784 0.8680385905856719 1.0915771903400233 0.8306692960511525 0.9916529806022776 0.9279501659539872 0.9864317219302029 0.921415295061916 1.099370801931927 1.0 11.519096475441572 -5.339660127316596 3.6189634696104767 0.9579190779536747 1.1335444346407073 0.23846119320494152 0.07892474879003304 0.18039297128061077 3.9096621491478447 0.008173322587687257 0.07283541435518837 4.574460403358567e-06 5.339660127316596 0.1756253566870326 IISPGSST(ph)PSSTRS(ph)PPPGRDESYPR ddPTM_A549_PD325901_60min_R1 1 IISPGSSTPSSTRSPPPGRDESYPR 25 2 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 2 IIS(0.026)PGS(0.098)S(0.379)T(0.497)PS(0.226)S(0.198)T(0.173)RS(0.403)PPPGRDESYPR 68.834 7.0015e-05 24343000.0 2540.1 2935.9 3068.1 3228.3 3164.9 3447.2 3228.9 2681.2 2897.2 3311.4 3634.0 True False 2797.9690820772125 3183.318596541947 3276.3197159840774 3427.7047589987433 2942.608342312268 3419.1271461155166 3351.7775564218773 2627.721362639289 2775.4407592843936 3102.317638872942 3187.0410378240013 0.877920631981434 0.9988320071069446 1.0280130306138238 1.075513216905126 0.9233041894940195 1.0728218135684802 1.0516894877231804 0.8245018910812031 0.8708519050571644 0.9734162823931174 1.0 11.63800188071039 -8.22676974090976 24.990901811989563 0.928720964830405 1.0070295118194363 0.24762763941237642 0.07166115294504405 798.7821945323038 575786.9484289809 0.012583247177064839 0.01624442407347037 5.932397716901121e-09 8.22676974090976 0.07830854698903134 IISPGSSTPSSTRS(ph)PPPGRDESYPR ddPTM_A549_MK2206_60min_R1 2 IISPGSSTPSSTRSPPPGRDESYPR 25 2 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IISPGSSTPS(0.051)S(0.051)T(0.051)RS(0.847)PPPGRDESYPR;IISPGSST(0.001)PS(0.134)S(0.134)T(0.134)RS(0.597)PPPGRDESYPR 154.88 6.4676e-41 77812000.0 12293.599999999999 14244.3 12572.0 12898.8 18460.8 14286.3 13766.0 14883.400000000001 19889.3 19630.8 19841.1 True False 14368.459130336963 14969.274027675507 14354.89864374722 16059.006579049135 15745.240774873875 15798.066783521559 16267.104010009787 16993.16752850089 15384.405306685609 15196.188645817281 14914.007283497618 0.963420417947341 1.0037056937902291 0.9625111729448427 1.0767734166804694 1.0557350868599895 1.0592771267452816 1.0907265700486397 1.1394098987268075 1.0315406861647767 1.018920559508637 1.0 13.86438033074996 -6.248235462334057 24.34551917928888 1.0389044170379593 0.9792617514172001 0.39132913235540456 0.040469336107572106 656.713138088173 1210851.482082845 0.0067895202063705615 0.0178496983401297 5.646307647854564e-07 6.248235462334057 -0.05964266562075926 IISPGSSTPSSTRS(ph)PPPGRDESYPR ddPTM_A549_PD325901_60min_R1 2 IISPGSSTPSSTRSPPPGRDESYPR 25 2 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IISPGSSTPS(0.022)S(0.086)T(0.055)RS(0.836)PPPGRDESYPR;IISPGSSTPS(0.198)S(0.198)T(0.198)RS(0.405)PPPGRDESYPR 198.68 1.3536999999999999e-68 111039000.0 14687.1 15019.8 13830.7 15525.7 16839.0 16673.1 16562.5 17564.5 18205.2 19557.4 19202.3 True False 16178.123579928431 16285.571257992677 14769.334472755443 16484.687227576982 15656.28673139634 16537.31980154869 17192.795000847767 17214.162268416316 17440.098754288356 18322.542426313248 16840.538833408853 0.9606654359439913 0.9670457352400618 0.8770108022586259 0.978869345609897 0.9296784910668563 0.9819946953681418 1.0209171553786685 1.0221859548974914 1.035602181546001 1.0880021481239273 1.0 14.039650679465053 -7.520239084889179 3.0213817541733428 1.0179981963629408 0.9424155387849007 0.6104552649727915 0.03349725477924527 0.12254534391506153 2.288677634301734 0.004059095346808936 0.006453757132693559 3.0182896543459e-08 7.520239084889179 -0.07558265757804006 IISS(ph)SPNK ddPTM_A549_MK2206_60min_R1 1 IISSSPNK 8 0 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 IIS(0.098)S(0.506)S(0.396)PNK 65.5 0.010514 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IISS(ph)SPNKK ddPTM_A549_PD325901_60min_R1 1 IISSSPNKK 9 1 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 IIS(0.01)S(0.495)S(0.495)PNKK 134.3 1.9367e-05 185840000.0 12942.0 12084.0 13016.0 12516.0 17492.0 14706.0 14590.0 15741.0 14205.0 12886.0 14683.0 True False 14255.862312603165 13102.361088801681 13899.344031566363 13289.08489410162 16263.422264124045 14586.239211758755 15145.230433954339 15427.033406424389 13608.013249218133 12072.375760861485 12877.084083205775 1.1070722393740975 1.0174944113232678 1.0793859806890453 1.0319948839530506 1.2629739899993908 1.1327284280749592 1.1761381952694296 1.1980222623958978 1.0567620092630778 0.937508498263688 1.0 13.652518322772236 -9.011875184081237 3.899469910506153 1.0231469185921993 1.1242589392414957 0.3705194829963707 0.0726804271324092 0.19842136567741742 6.40375800046064 0.013207348326648587 0.013360842996614684 9.730268308002812e-10 9.011875184081237 0.10111202064929636 IISSS(ph)PNKK ddPTM_A549_MK2206_60min_R1 4 IISSSPNKK 9 1 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 IIS(0.002)S(0.064)S(0.934)PNKK;IISS(0.437)S(0.562)PNKK;IISS(0.092)S(0.908)PNKK;IISS(0.082)S(0.918)PNKK 145.91 1.2997000000000001e-05 206296900.0 26955.5 30608.3 31267.100000000002 29746.0 38533.5 29295.699999999997 31012.3 28122.5 40201.2 40693.6 40736.5 True False 31504.929401298086 32166.131731380294 35701.244939859076 37033.7713353487 32865.27319501877 32395.75152908821 36646.83348028667 32108.95049654419 31095.69238812476 31500.887497067386 30620.5027797955 1.0288834781016778 1.0504769292228817 1.1659261507428946 1.209443607169798 1.0733093911411686 1.057975819732917 1.1968070460445723 1.048609512634483 1.015518674260398 1.0287514781714424 1.0 14.902210351216755 -8.500025425625845 7.25143203970648 1.0084911581035918 1.1126152892392427 0.37016219426856 0.05660785620874447 0.13894128046533308 31.787310596087647 0.009473202858127222 0.011241723018596501 3.1620925310948576e-09 8.500025425625845 0.10412413113565089 IISSS(ph)PNKK ddPTM_A549_PD325901_60min_R1 3 IISSSPNKK 9 1 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 IISS(0.01)S(0.99)PNKK;IIS(0.001)S(0.016)S(0.982)PNKK;IISS(0.077)S(0.923)PNKK 143.5 1.4887999999999999e-05 153146800.0 14704.599999999999 15280.8 17279.1 16324.900000000001 18762.0 18657.2 17662.3 18786.6 16345.600000000002 16084.099999999999 17677.1 True False 16197.400167045611 16568.566643972255 18451.763633669212 17333.251996462088 17444.221845386208 18505.26194897494 18334.448491681414 18411.886525197417 15658.651275355163 15068.547181070311 15502.92876436947 1.0447961422794028 1.0687378427521355 1.1902114699821802 1.118063061497081 1.1252210540680823 1.1936623221481713 1.182644181002731 1.1876392393360946 1.0100447156374472 0.9719806760450643 1.0 13.920253170190263 -8.775834510870604 24.66924242796881 1.0047433128338215 1.1403821905758211 0.6407896866640921 0.048112217473695776 93.94917816101295 161002.07969347262 0.008488668252606654 0.009057533822142102 1.675581239320543e-09 8.775834510870604 0.13563887774199967 IISTTASKTET(ph)PIVSK ddPTM_A549_MK2206_60min_R1 2 IISTTASKTETPIVSK 16 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 IISTTASKT(0.006)ET(0.99)PIVS(0.004)K;IISTTASKTET(0.999)PIVS(0.001)K 181.14 2.4190999999999997e-34 18546300.0 9361.7 10952.5 10779.8 10370.3 14781.900000000001 10470.7 9280.099999999999 8869.8 14955.400000000001 15686.6 16778.8 True False 10941.726088409861 11509.935468090122 12308.537734637785 12911.023965540453 12607.50209146453 11578.702524111855 10966.174046439903 10127.121312623265 11568.02577886633 12142.98616518315 12612.160888678038 0.867553640092894 0.9126061401914571 0.9759261591474926 1.0236964212160269 0.999630610705443 0.9180585806280096 0.8694920833339717 0.8029648053185241 0.9172120369357935 0.9627998145887858 1.0 13.622527858728485 -10.566793464366965 1.1044046897478035 0.9958387383726218 0.9234978917091532 0.11967433133372418 0.06066348115275916 0.6937204347208847 1.6199855039913986 0.03351827643370696 0.011668929695008703 2.7114808130525666e-11 10.566793464366965 -0.07234084666346863 IISTTASKTET(ph)PIVSK ddPTM_A549_PD325901_60min_R1 2 IISTTASKTETPIVSK 16 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 IISTTASKT(0.007)ET(0.991)PIVS(0.002)K;IISTTAS(0.001)KT(0.003)ET(0.996)PIVSK 132.14 1.5152e-10 39797000.0 12923.9 12625.0 13372.3 13523.2 15021.400000000001 17696.1 15089.599999999999 15927.6 14423.2 13623.9 14100.2 True False 14235.924813927673 13688.95305744136 14279.824692172318 14358.497350584461 13966.348685016743 17551.988828723246 15663.842985345955 15609.911523039513 13817.043062029075 12763.684628930676 12365.964788532185 1.1512182880489545 1.106986255543609 1.1547683449183834 1.1611303764911323 1.1294184419778313 1.419378845797816 1.2666899229627535 1.262328640747519 1.1173445257455832 1.0321624593955923 1.0 13.594087182264106 -9.414458122389714 1.2604602690300304 1.0292482491976436 1.2040696762447733 0.4071596677218946 0.08579852642302802 0.2891633559019563 0.9518389163270649 0.022933418769119703 0.018396822933473545 3.8507194412884137e-10 9.414458122389714 0.17482142704712977 IISVT(ph)PVK ddPTM_A549_MK2206_60min_R1 3 IISVTPVK 8 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.014)VT(0.986)PVK;IIS(0.135)VT(0.865)PVK;IIS(0.035)VT(0.965)PVK 119.68 0.0012898 133196000.0 10349.2 10663.3 10842.6 8692.1 12905.1 10930.8 10347.6 10067.1 15786.099999999999 13521.1 14489.5 True False 12095.891946352844 11206.016423363199 12380.243718954298 10821.664890203203 11006.776885282603 12087.490000722193 12227.624978496102 11494.142254200735 12210.573555221637 10466.674119188223 10891.357260143775 1.1105954618362384 1.0288907209362141 1.1367034817835797 0.993601130853029 1.010597359207121 1.1098240294582558 1.1226906515354438 1.0553452595171782 1.1211250593996627 0.9610073261934348 1.0 13.410896130708533 -11.026094782478015 1.3251320495584562 1.0001260135842285 1.0795332420525183 0.34946026290449217 0.04852918969180185 0.4736173037229186 1.4855143425676138 0.03341147058549346 0.007579327271519595 9.416840565205037e-12 11.026094782478015 0.07940722846828985 IISVT(ph)PVK ddPTM_A549_PD325901_60min_R1 2 IISVTPVK 8 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.46)VT(0.54)PVK;IIS(0.18)VT(0.82)PVK 96.34200000000001 0.0026358 150635000.0 6891.8 6408.7 7285.4 6092.799999999999 8470.2 6795.8 7355.299999999999 7087.799999999999 7835.8 7767.799999999999 8564.2 True False 7591.450462524988 6948.783640334605 7779.831054669149 6469.13841824723 7875.282372603673 6740.457257940313 7635.209966474597 6946.42826872846 7506.488575728513 7277.339782338961 7510.857692936789 1.0107301686282764 0.9251651308570579 1.0358112711928096 0.861304884571413 1.0485197156657073 0.8974284340760496 1.0165563346586568 0.9248515352994747 0.9994182931714464 0.9689092883736263 1.0 12.874761948552468 -8.920331651518579 24.99999999272459 0.9997449237164039 0.9646922388928086 0.026333840762833405 0.057373004919661894 55.61796789303642 17449.80351907323 0.008406895255484131 0.008949803495804745 1.2013466688305929e-09 8.920331651518579 -0.03505268482359525 IISVT(ph)PVKNIDPVK ddPTM_A549_MK2206_60min_R1 2 IISVTPVKNIDPVK 14 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IISVT(1)PVKNIDPVK;IIS(0.027)VT(0.973)PVKNIDPVK 153.36 1.2818000000000001e-14 100180000.0 18057.4 21605.6 20850.4 18714.8 26783.0 20428.4 18949.2 18973.2 29019.0 29028.0 30114.0 True False 21105.047658956428 22705.232755021036 23807.300245115075 23299.926840139284 22843.256179225562 22590.11972872557 22392.024357582268 21662.709202988077 22446.24283382068 22470.55463917843 22635.86269588114 0.9323721363090234 1.0030646085847004 1.0517513984323246 1.0293368162362542 1.0091621638693788 0.9979791816300471 0.9892277868277032 0.9570083320451427 0.9916230335636838 0.9926970728297981 1.0 14.46632267104141 -7.4177857175628885 3.6348686031217086 0.9919770659278502 1.0088944271360818 0.06575408958977136 0.02929868622818777 0.5852890633972475 14.183616754554519 0.004529656326540906 0.007361679393273626 3.821327699966698e-08 7.4177857175628885 0.016917361208231618 IISVT(ph)PVKNIDPVK ddPTM_A549_PD325901_60min_R1 2 IISVTPVKNIDPVK 14 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.002)VT(0.998)PVKNIDPVK;IISVT(1)PVKNIDPVK 174.19 3.8694000000000003e-23 165091000.0 29487.0 27253.0 31766.0 31515.0 37724.0 34116.0 35037.0 36502.0 35558.0 36200.0 36472.0 True False 32480.49853281789 29549.705954411806 33921.83178447583 33461.609974241954 35074.39638073493 33838.17060712374 36370.35220798204 35773.93897473496 34063.62091627587 33914.32582206937 31986.175215056934 1.0154542803082083 0.9238274271849107 1.0605154119367082 1.0461272643342017 1.096548622800774 1.0578998701662528 1.1370647463614634 1.1184187773064849 1.064948237394792 1.0602807492314614 1.0 14.96516087034104 -5.778755465986488 24.873924056442636 1.0529142008780012 0.9696408516391456 0.4023398986978888 0.043276666534656276 188.4041548067491 270636.6134412158 0.007130023295625339 0.022242751286223116 1.6643495158507697e-06 5.778755465986488 -0.08327334923885565 IITT(ph)PTK ddPTM_A549_PD325901_60min_R1 2 IITTPTK 7 0 D6RCT7;C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87 D6RCT7 KIF15 Kinesin-like protein;Kinesin-like protein KIF15 1 IIT(0.011)T(0.985)PT(0.004)K;IIT(0.273)T(0.72)PT(0.007)K 94.85 0.012685 17147800.0 5814.799999999999 5754.9 5627.0 5500.9 6578.9 6203.3 5542.5 6902.2 6940.5 7332.6 6999.799999999999 True False 6405.114215370486 6239.885619823303 6008.882057899809 5840.6780995496665 6116.820759972886 6152.782381497557 5753.422870472371 6764.530206328846 6648.814921238897 6869.618384610653 6138.868975388125 1.0433704060226383 1.0164552533765052 0.9788255918134989 0.9514257631114197 0.996408423847514 1.0022664445462532 0.9372121955263942 1.1019179971830502 1.0830683873357194 1.1190364889936957 1.0 12.583757162748789 -8.258467811054803 24.995780329732238 1.045024623558957 0.9893566828697818 0.42854052600147374 0.042986330139034065 270.575444412131 2275981.7227951 0.007119385530162174 0.008992094206370755 5.514830755712397e-09 8.258467811054803 -0.055667940689175244 IIVDELK ddPTM_A549_PD325901_60min_R1 2 IIVDELK 7 0 H0YAF8;H0YAM7;J3KPE3;H0Y8W2;P63244;H0Y9P0;D6RF23;D6RAC2;D6REE5 H0YAF8 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 121.52 5.4845e-05 907360.0 695.78 755.32 888.93 840.35 954.98 857.23 839.0 728.56 914.39 863.73 961.89 False True 766.4150733938363 818.973467195771 949.2581353703353 892.2565109266778 887.9054993021485 850.2490030937006 870.9286041184166 714.0282992557366 875.9613681768795 809.1939403949157 843.5836279230948 0.908522934804641 0.9708266496495267 1.1252685613486968 1.057697756799069 1.0525399852628414 1.007901261890319 1.032415252371179 0.8464226611577043 1.0383811861468897 0.9592338134716452 1.0 9.720387285684703 IIVEETKS(ph)NGQTVIEEK ddPTM_A549_PD325901_60min_R1 2 IIVEETKSNGQTVIEEK 17 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 IIVEET(0.026)KS(0.974)NGQTVIEEK;IIVEET(0.026)KS(0.969)NGQT(0.005)VIEEK 171.15 2.1571e-30 23818500.0 8923.4 9846.7 9015.8 10541.8 12345.400000000001 10098.6 9816.1 9311.7 12271.3 11347.8 11188.9 True False 9829.296998940123 10676.515965996652 9627.666404409647 11192.943043835132 11478.30169331792 10016.360349780161 10189.657057076029 9125.970838612666 11755.57993559525 10631.297971372329 9812.736232280942 1.001687680812687 1.0880263886920893 0.9811398346505563 1.140654632804021 1.1697350689563804 1.0207510028476416 1.0384113886150461 0.9300128549864588 1.197992043944169 1.0834182963563788 1.0 13.260439765481136 -8.776578868745618 24.999504162161024 1.093496213241602 1.051665800297963 0.06605536933258194 0.07766275383247571 691.6567547901145 1142114.4431211224 0.016339766752963503 0.017428657556805845 1.6727118410022104e-09 8.776578868745618 -0.04183041294363887 IIVEKPFGR ddPTM_A549_MK2206_60min_R1 1 IIVEKPFGR 9 1 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 132.84 4.8029e-05 13208000.0 5519.7 6000.1 5837.7 5130.4 7699.2 6237.8 5735.0 6092.6 8681.0 8089.2 7807.6 False True 6451.290416291476 6305.479461500803 6665.57364083703 6387.348230312409 6566.657879068567 6897.879855683475 6776.975264957587 6956.244707804967 6714.767360708409 6261.844101806606 5868.757441202147 1.099260018994754 1.074414733386766 1.1357725562213157 1.0883646656563872 1.1189179216995315 1.1753560996159564 1.1547547045272675 1.185301109732022 1.1441548620780904 1.0669795377544076 1.0 12.518839366672994 -10.645773998407762 0.9429128573935532 1.0008604370364507 1.1309225224316637 0.46768441108625003 0.03781832965134142 0.2793058629440896 0.4468109583839359 0.02402984919677349 0.006622919234804603 2.2606118592351864e-11 10.645773998407762 0.13006208539521302 IIVEKPFGR ddPTM_A549_PD325901_60min_R1 2 IIVEKPFGR 9 1 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 161.28 7.500700000000001e-06 69909000.0 21542.5 22950.0 23715.9 22341.6 27954.0 27639.0 25699.0 26756.0 25941.0 26121.0 28659.0 False True 23729.478741249677 24884.077043032004 25325.40358929201 23721.58989054497 25990.607476064695 27413.91714768124 26676.98950803239 26222.33059032404 24850.789982257513 24471.715602162254 25134.12468436929 0.9441139900132209 0.9900514680945787 1.0076103268892302 0.9438001198942582 1.034076491719962 1.0907050669932314 1.0613852617920128 1.0432959539916462 0.9887270909303645 0.9736450307887992 1.0 14.617359826469794 -4.448039255924649 0.8684233768148247 1.0098908322627629 0.7511402778099621 0.22193706768687038 0.039220069460777045 10.872683516882127 2.1756108870469952 0.00651127071948663 3.767229615205592 3.564189152263113e-05 4.448039255924649 -0.2587505544528008 IIYDS(ph)DSESEETLQVK ddPTM_A549_PD325901_60min_R1 1 IIYDSDSESEETLQVK 16 0 P35251-2;P35251;D6RAD2;E0CX09 P35251-2 RFC1 Replication factor C subunit 1 1 IIYDS(0.991)DS(0.008)ES(0.001)EETLQVK 148.57 5.7593e-41 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IIYDSDS(ph)ESEETLQVK ddPTM_A549_PD325901_60min_R1 1 IIYDSDSESEETLQVK 16 0 P35251-2;P35251;D6RAD2;E0CX09 P35251-2 RFC1 Replication factor C subunit 1 1 IIYDS(0.047)DS(0.846)ES(0.092)EET(0.016)LQVK 115.78 1.6995e-07 2509700.0 1626.5 1586.4 1648.7 1413.5 1873.4 2107.5 2091.8 1776.8 1553.8 2558.3 2041.1 True False 1791.6210826339848 1720.0914954712837 1760.5906964384972 1500.808684708584 1741.818846879145 2090.337218739398 2171.4045936768816 1741.360330127364 1488.49918948505 2396.76850139779 1790.0576395989453 1.0008734037387699 0.9609140272470013 0.9835385506541285 0.8384136083153354 0.9730518215432392 1.1677485531738123 1.2130361311512714 0.9727956751814474 0.8315370167736843 1.3389337015621325 1.0 10.805790327472698 -8.52550143606766 24.93776904504211 0.9194858379280756 1.0186509506155828 0.0 0.16226156871506794 126.15426853537899 1199523.9291959237 0.02003816951961651 0.02278541997973607 2.981937687631403e-09 8.52550143606766 0.09916511268750716 IIYGGS(ph)VTGATCK ddPTM_A549_MK2206_60min_R1 1 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 IIYGGS(0.989)VT(0.011)GATCK 174.73 6.826399999999999e-22 3482900.0 2534.3 3208.0 2509.4 2056.0 3785.9 2769.7 2618.3 2347.2 3838.9 3865.6 3810.7 True False 2962.0278823138033 3371.273497524135 2865.270653565006 2559.720092297349 3228.999125151404 3062.7878156219376 3094.0112181758423 2679.922787998526 2969.395279463601 2992.3582752242037 2864.398020030358 1.0340839023071278 1.1769570687974449 1.000304648141964 0.8936328242086342 1.1272871656003942 1.0692605546450829 1.0801610657945682 0.9355972072519877 1.03665596006526 1.044672651740099 1.0 11.48401625967588 IIYGGS(ph)VTGATCK ddPTM_A549_PD325901_60min_R1 1 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 IIYGGS(0.997)VT(0.003)GATCK 133.32 3.0637e-08 3552100.0 4952.6 4914.3 5316.5 6057.2 6705.9 5989.0 6238.1 7290.5 5638.9 5875.3 5370.6 True False 5455.384306088581 5328.445307737352 5677.309660711632 6431.339487100699 6234.900718099101 5940.22756964662 6475.494309119303 7145.085258213388 5401.9166428029675 5504.332555315028 4710.050247038407 1.158243334987525 1.131292667437631 1.2053607420178627 1.3654502924134635 1.3237439923320333 1.2611813586026446 1.3748248892229917 1.5169870560735708 1.1468915105947315 1.1686356337230268 1.0 12.20152673532105 -9.13746397496521 2.7473106383783787 1.0542938168234441 1.2897318199856511 0.3320621937422287 0.11269340697203135 0.16574275464687005 2.6004893593002465 0.02284070613489563 0.02197667327681699 7.286786164135407e-10 9.13746397496521 0.23543800316220698 IIYGGSVTGATCK ddPTM_A549_MK2206_60min_R1 2 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 0 ; 147.37 3.9102e-12 4179600.0 5639.200000000001 7112.3 6097.1 5788.9 7257.1 5536.3 5815.9 6395.8 8081.8 7315.5 9328.8 False True 6590.959094796981 7474.285690910507 6961.760461405592 7207.180759873597 6189.590203422238 6122.147591301489 6872.573747771018 7302.424236316028 6251.285203982637 5662.923469164596 7012.201498217973 0.9399272249195858 1.0658971640803483 0.9928066760738122 1.0278057128998896 0.8826885828930063 0.8730706886927486 0.9800878867382179 1.0413882484939732 0.8914868184508518 0.8075813951729323 1.0 12.775651737733737 -6.727382023853267 24.99660050276171 0.9475579600110334 1.009858180700977 0.19871705275170326 0.06990245183841443 248.7769129392238 182590.10797546804 0.008763844237461453 0.01824266723551929 1.8733459085380164e-07 6.727382023853267 0.062300220689943564 IIYIVHDEVKDK ddPTM_A549_PD325901_60min_R1 1 IIYIVHDEVKDK 12 1 G3V4X5;P25788-2;P25788 G3V4X5 PSMA3 Proteasome subunit alpha type-3 0 77.593 0.0037758 1683900.0 1241.7 981.63 1086.0 998.89 1224.1 1045.9 928.3 1138.0 1049.4 1142.3 1067.1 False True 1367.7564699087739 1064.355405130785 1159.7024906485153 1060.589166656213 1138.123438915747 1037.3825371670403 963.6269644852508 1115.3016972562702 1005.2973673868023 1070.1749830538631 935.8534649042351 1.4615070854588703 1.1373098941720532 1.2391923887007101 1.1332855050814412 1.2161342363916023 1.1084882153780287 1.0296771883874551 1.1917482160205475 1.0742038204556663 1.143528365483343 1.0 9.870138841371919 -2.0000000000000004 0.20426814375836508 1.0065898507875226 2.6612428372366987 0.5176519784335621 0.08254290841628685 20.314640406208625 0.22811064487762597 0.051636380788391986 10.970277695379707 0.00999999999999999 2.0000000000000004 1.6546529864491761 IKDNGDLVLSS(ph)PSNVTLPQVK ddPTM_A549_MK2206_60min_R1 2 IKDNGDLVLSSPSNVTLPQVK 21 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 IKDNGDLVLS(0.451)S(0.547)PS(0.002)NVTLPQVK;IKDNGDLVLS(0.036)S(0.939)PS(0.025)NVTLPQVK 116.38 3.7981e-15 44237000.0 6861.6 9633.5 10565.6 7081.700000000001 9160.1 6850.9 5809.200000000001 6046.4 11037.7 14502.0 14150.7 True False 8019.67032998634 10123.804001994626 12063.960953736518 8816.716817909593 7812.661424311093 7575.857690740628 6864.656444497232 6903.495716323401 8537.67857358498 11225.988127923574 10636.690650548093 0.7539629188682947 0.9517813702209118 1.1341836808156942 0.8288966096287929 0.7345011414719029 0.7122382270608063 0.6453752083260508 0.6490266515335458 0.8026630513264995 1.055402332993967 1.0 13.376761740474768 -5.207546284558837 19.87746119762055 0.8612525525552568 0.7539553679585029 0.02720280593895985 0.1578335015786584 10147.67653599158 3741316.180815787 0.023013436811037773 18.102467247673776 6.20088554730687e-06 5.207546284558837 -0.10729718459675386 IKDTCIQS(ph)PSKECQK ddPTM_A549_MK2206_60min_R1 1 IKDTCIQSPSKECQK 15 2 Q03188;Q03188-2 Q03188 CENPC Centromere protein C 1 IKDT(0.01)CIQS(0.949)PS(0.041)KECQK 50.883 0.0046226999999999996 8188000.0 2103.1 2716.1 2508.7 2294.1 2875.6 2331.1 2447.3 2074.1 3202.0 3141.1 3707.3 True False 2458.0518641416406 2854.3378885989123 2864.471383039185 2856.154602986062 2452.6030492842856 2577.7754547410527 2891.9427316356914 2368.1100266648527 2476.7521125432936 2431.5233284113065 2786.6750937251827 0.8820733603556762 1.0242808338245415 1.027917244277662 1.0249327628532396 0.8801180499322887 0.9250362414138218 1.037775353914614 0.8497976789605569 0.8887839555175451 0.8725535796714948 1.0 11.444329089042716 -6.739947412071388 24.946553420021655 0.9401711889535963 0.9949864699971968 0.16228915342864048 0.06599616183299832 393.4317894767281 456668.85428110766 0.009647116887127797 0.02006724810913481 1.819921216217078e-07 6.739947412071388 0.05481528104360045 IKDTCIQS(ph)PSKECQK ddPTM_A549_PD325901_60min_R1 3 IKDTCIQSPSKECQK 15 2 Q03188;Q03188-2 Q03188 CENPC Centromere protein C 1 IKDTCIQS(0.947)PS(0.053)KECQK;IKDT(0.223)CIQS(0.738)PS(0.039)KECQK;IKDTCIQS(0.92)PS(0.08)KECQK 77.391 0.00011577 40225700.0 7967.33 9208.0 10479.9 8146.03 7856.22 9462.099999999999 8432.69 9335.76 6155.52 8933.38 9989.84 True False 8776.167476361656 9983.990475478808 11191.129034758173 8649.191772123575 7304.426209687664 9385.043794749257 8753.60063249503 9149.55094303796 5896.824900797415 8369.324862219826 8761.15301081335 1.0017137545172163 1.139574946717194 1.277358016798206 0.9872207187168642 0.8337288711511215 1.0712110361690839 0.9991379698186987 1.0443318284414431 0.6730649371742883 0.9552766458809799 1.0 13.096905032744138 -7.184762050897344 0.6909166211685871 0.8611183518190291 1.12846165110733 0.17332235618735958 0.13433323282559964 0.7489580319670096 0.6785876532731376 0.03161769143697946 0.09483053009732582 6.534884996582988e-08 7.184762050897344 0.2673432992883009 IKEDLEEQEALEDGVACADEKAES(ph)DGEEK ddPTM_A549_PD325901_60min_R1 1 IKEDLEEQEALEDGVACADEKAESDGEEK 29 2 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 IKEDLEEQEALEDGVACADEKAES(1)DGEEK 85.531 2.3961999999999997e-07 1935200.0 859.17 779.43 597.46 984.52 933.99 937.7 1151.1 729.64 932.41 807.31 1138.8 True False 946.3923059124749 845.1153015098232 638.0072284188418 1045.3315643928515 868.3897644905795 930.063682093444 1194.90574040609 715.0867578084927 893.2240502431181 756.3363088236134 998.7348194479831 0.9475911798444768 0.8461858794278666 0.638815445296559 1.0466557729214079 0.8694898261087488 0.9312418711981076 1.196419426997182 0.7159926177438499 0.8943555715187916 0.7572944229997436 1.0 9.963957859331178 -6.2842452455224675 24.997819999501232 0.9480525425155452 0.8143962727639283 0.10200954012713559 0.14246718884807136 970.7538496400643 1064054.889780986 0.017567837637025935 0.04084916059700228 5.197024383722611e-07 6.2842452455224675 -0.13365626975161682 IKEEEPDPEEWQLS(ph)GDSTLNTNDLTHLR ddPTM_A549_PD325901_60min_R1 1 IKEEEPDPEEWQLSGDSTLNTNDLTHLR 28 1 H0Y6K5;A0A494C070;Q02447-2;Q02447;A0A494C1G8;A0A494C0Z6;H0Y7L6;Q02447-4;Q02447-3;Q02447-5;Q02447-6 H0Y6K5 SP3 Transcription factor Sp3 1 IKEEEPDPEEWQLS(0.681)GDS(0.159)T(0.159)LNTNDLTHLR 76.777 2.9169e-06 3300700.0 2514.4 2214.9 2832.5 2269.0 2933.7 3197.1 2091.4 2759.0 2452.1 2927.4 2713.9 True False 2769.6600369965513 2401.5573961922246 3024.730483206188 2409.1509767271136 2727.6470327155694 3171.0638775951247 2170.9893714579916 2703.969580606372 2349.0467644074483 2742.5634644067904 2380.1075048295434 1.1636701415278747 1.0090121523162952 1.270837757146945 1.012202588260672 1.1460184160508817 1.332319599497346 0.9121392067596845 1.1360703561161296 0.9869498582063756 1.1522855412378548 1.0 11.216811023397698 -7.788819670081941 24.99988084216745 1.0010408411205862 1.147284405119791 0.1853874276318973 0.11133531659815292 178.36478189499155 162857.30158558078 0.014670546586896009 0.02027287607003508 1.6262238643532163e-08 7.788819670081941 0.1462435639992048 IKEEVLS(ph)ESEAENQQAGAAALAPEIVIK ddPTM_A549_MK2206_60min_R1 2 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 1 IKEEVLS(0.953)ES(0.047)EAENQQAGAAALAPEIVIK;IKEEVLS(0.962)ES(0.038)EAENQQAGAAALAPEIVIK 188.4 5.1981999999999994e-67 87442000.0 2327.17 2546.7 2844.2 2295.8 3329.5 2836.2 2767.8 3043.3999999999996 4063.8 3648.2 3570.0 True False 2719.939402156104 2676.3161521648126 3247.5503279148757 2858.2711030623796 2839.7349605619816 3136.324801482811 3270.673433016495 3474.811270021605 3143.355788555103 2824.0690862150614 2683.4704730124085 1.013590210703066 0.9973339297303448 1.2102053518290599 1.0651397627840278 1.0582322366208687 1.1687569634265575 1.2188222176877186 1.294894542335267 1.1713770731475337 1.0523943209424695 1.0 11.389884298477208 -5.7247008314955 24.983471274385362 1.1156464547969709 1.005461790384815 0.2303337588801142 0.08581032655100874 253.41792725069666 172329.43002142376 0.014111106799384342 0.054648741074436416 1.8849471087959399e-06 5.7247008314955 -0.1101846644121558 IKEEVLS(ph)ESEAENQQAGAAALAPEIVIK ddPTM_A549_PD325901_60min_R1 1 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 1 IKEEVLS(0.938)ES(0.062)EAENQQAGAAALAPEIVIK 188.74 4.902799999999999e-67 110740000.0 2004.4 1614.1 2048.6 1923.4 2384.7 1507.3 1851.7 2139.8 1800.1 2330.0 1443.1 True False 2207.885212438708 1750.1258716844432 2187.63031523255 2042.2040496416626 2217.206898768386 1495.025048543722 1922.1674567891187 2097.1200103593733 1724.4480570163716 2182.8834023597133 1265.6078485646167 1.7445255376242894 1.3828342433790533 1.7285214513434322 1.6136151904855986 1.751890920464045 1.1812703676255625 1.5187701774835989 1.6570061672245573 1.3625453247403185 1.7247707533067376 1.0 10.305614736369675 -10.021606762398832 0.3366050915961243 0.8703151701143677 1.6325027402536378 0.0 0.2708547382785938 0.9260822089216391 0.19345807769127524 0.26566764266073245 0.07606713203184322 9.514659209617533e-11 10.021606762398832 0.7621875701392702 IKEEVLSES(ph)EAENQQAGAAALAPEIVIK ddPTM_A549_PD325901_60min_R1 1 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 1 IKEEVLS(0.066)ES(0.934)EAENQQAGAAALAPEIVIK 301.7 9.043499999999996e-187 123270000.0 13433.0 13708.0 11904.0 16158.0 15558.0 14365.0 16258.0 15154.0 15278.0 15346.0 15190.0 True False 14796.708271148062 14863.221268230182 12711.877024567146 17156.0429625195 14465.25975218626 14248.01620270057 16876.707086718976 14851.741581916986 14635.91879067616 14377.050941035246 13321.72629734358 1.1107200328908273 1.1157128540611123 0.9542214530486156 1.2878243089216224 1.085839734980196 1.069532272671125 1.266855864625013 1.1148511274307218 1.0986503148315423 1.079218310010025 1.0 13.70149342586572 -10.064419764946456 0.8037974205032767 1.0068179110865967 1.1243314733035845 0.09926438595073717 0.08860775285833733 0.6450004451066715 0.8328657263683793 0.038735023002424526 0.016763649934168345 8.621448435618863e-11 10.064419764946456 0.11751356221698783 IKEKGS(ph)FSDTGLGDGK ddPTM_A549_MK2206_60min_R1 2 IKEKGSFSDTGLGDGK 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IKEKGS(0.629)FS(0.325)DT(0.046)GLGDGK;IKEKGS(0.559)FS(0.03)DT(0.411)GLGDGK 83.06299999999999 3.5823e-05 12661800.0 3060.1000000000004 4933.4 4996.700000000001 4115.4 5430.7 4394.5 4233.6 4720.1 7051.5 6930.5 6788.1 True False 3576.5700677380228 5184.48898774488 5705.307194814807 5123.673184747325 4631.851224004788 4859.523073166989 5002.790319393971 5389.188629699999 5454.346508931616 5364.895236558709 5102.427427970733 0.7009546178220601 1.0160828470238104 1.118155480965624 1.0041638528085917 0.9077740525252121 0.9523943538183063 0.9804726064244311 1.0562009368633611 1.0689709135365093 1.0514397925875765 1.0 12.31696804255677 -8.109822789127602 4.593123275398746 1.0351218399023128 0.9614551922728695 0.16345249590692823 0.09691721436810846 0.4023603171096237 13.7172012704042 0.015563804267747759 0.020323633172992947 7.765639235497418e-09 8.109822789127602 -0.0736666476294433 IKEKGS(ph)FSDTGLGDGK ddPTM_A549_PD325901_60min_R1 1 IKEKGSFSDTGLGDGK 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IKEKGS(0.864)FS(0.132)DT(0.004)GLGDGK 87.156 2.7945e-06 10017000.0 3314.9 2852.7 3114.4 3663.7 5104.4 5212.7 3787.2 4247.9 6059.4 4637.0 4270.5 True False 3651.426207699597 3093.1070405515225 3325.7619124085963 3889.9984281335965 4745.884553224033 5170.249499465176 3931.3239684353593 4163.172302086916 5804.744490131106 4344.2190286446275 3745.2555729299393 0.9749471395467576 0.825873423140457 0.8879933151816473 1.038646990141296 1.2671724160899638 1.3804797559971198 1.0496810943558272 1.1115856370864532 1.54989275821036 1.1599259233585801 1.0 11.870848454939697 -6.563552420723362 2.9914681087535735 1.2474511672933715 0.8920661524776083 0.463004072197266 0.15031381828507828 0.21781924773411807 3.963371050074572 0.03025673670025087 0.07062120117044518 2.731791688044194e-07 6.563552420723362 -0.3553850148157631 IKEKGSFS(ph)DTGLGDGK ddPTM_A549_PD325901_60min_R1 1 IKEKGSFSDTGLGDGK 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IKEKGS(0.405)FS(0.565)DT(0.031)GLGDGK 56.303999999999995 0.0021951 9969800.0 3431.3 2765.4 3276.5 4112.0 5263.2 5350.5 3834.1 5659.6 6580.1 4403.7 4869.9 True False 3779.643050010448 2998.4499631721437 3498.8629931950845 4365.988900970428 4893.530989054293 5306.927301952623 3980.0087736000255 5546.714838129689 6303.561279914137 4125.649630459855 4270.9331728395955 0.8849689042307104 0.7020596768501012 0.8192268180278766 1.0222564306871684 1.1457755930657079 1.2425685645706863 0.9318827086572875 1.298712626412244 1.4759213091885297 0.9659831852898915 1.0 12.060335609013675 -6.5085779180446 1.6522463096788396 1.2135057531957514 0.7783244481210037 0.45211298910089026 0.16016301320923013 0.25628092302127115 1.3684569118794603 0.028685308808186715 0.08483211367321129 3.1004310812112194e-07 6.5085779180446 -0.4351813050747477 IKENEFS(ph)PTNSTSQTVSSGATNGAESK ddPTM_A549_PD325901_60min_R1 2 IKENEFSPTNSTSQTVSSGATNGAESK 27 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 IKENEFS(0.672)PT(0.138)NS(0.059)T(0.059)S(0.059)QT(0.012)VS(0.001)SGATNGAESK;IKENEFS(0.183)PT(0.126)NS(0.126)T(0.126)S(0.126)QT(0.126)VS(0.162)S(0.024)GAT(0.001)NGAESK 70.268 4.8755e-05 6132400.0 1285.3000000000002 1103.96 1175.71 1458.44 1603.6 1044.56 902.9100000000001 1464.13 1519.42 1473.52 1648.65 True False 1415.782709812149 1196.994583547957 1255.5007507185692 1548.5245264424384 1490.968668119674 1036.053449682764 937.2707341413108 1434.9267785622346 1455.5640613253809 1380.4816957275027 1445.8765016534228 0.9791864714539172 0.8278677896619397 0.8683319421007599 1.07099363235493 1.0311867344235046 0.7165573605338988 0.6482370610971966 0.9924269305997665 1.0067001294100015 0.9547715134376011 1.0 10.497728615608732 -8.481425700313936 24.97845061953521 1.0029745646077373 0.8779530152990118 0.16521193950485413 0.11861273848516937 631.6177606234058 380595.9170814446 0.020262749884633106 0.02449507153993964 3.3004586777355256e-09 8.481425700313936 -0.12502154930872544 IKFPLPHR ddPTM_A549_PD325901_60min_R1 2 IKFPLPHR 8 1 M0R3D6;M0R1A7;Q02543;M0R0P7 M0R3D6 RPL18A 60S ribosomal protein L18a 0 ; 66.07300000000001 0.030842 5316300.0 354.24 369.34000000000003 377.69 397.08000000000004 395.4 713.49 328.71 380.61 610.62 391.84000000000003 493.96999999999997 False True 390.2021840222953 400.46557799884283 403.322314634473 421.60672976588955 367.62846805594836 707.6795739968554 341.21923892701386 373.018434967231 584.9577648882497 367.09915552816733 433.21482153382556 0.900712913378076 0.9244041479951405 0.9309984206137819 0.973204767725082 0.8486054718865241 1.6335534677490242 0.7876444248119321 0.8610472597556443 1.3502718185337432 0.8473836472824928 1.0 8.758938792341366 IKGEHPGLSIGDVAK ddPTM_A549_MK2206_60min_R1 1 IKGEHPGLSIGDVAK 15 1 Q5T7C4;P09429;B2RPK0 Q5T7C4 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 0 99.705 3.1973e-05 3184900.0 921.0 1176.0 1449.9 1436.1 1772.9 1237.7 1112.5 1598.0 2196.6 1777.6 1663.0 False True 1076.4422837118784 1235.8533768978748 1655.5176219829054 1787.9445644689777 1512.1087585464288 1368.6725924812329 1314.62684956675 1824.521393669753 1699.0736072494074 1376.0389254031834 1250.0312035349114 0.861132330671308 0.9886580218182205 1.324381037290378 1.430319946744468 1.2096568103823322 1.094910741916538 1.0516752268656744 1.459580679674447 1.3592249557008398 1.1008036611501697 1.0 10.287748392848014 -5.5881748626579615 5.142476094475168 1.2067146162545523 0.8888229128243007 0.3841931252738332 0.14859868583414323 0.1707385584346211 8.515674886464843 0.024464036312494514 0.10314126639379673 2.5812206886189075e-06 5.5881748626579615 -0.31789170343025164 IKGEHPGLSIGDVAK ddPTM_A549_PD325901_60min_R1 2 IKGEHPGLSIGDVAK 15 1 Q5T7C4;P09429;B2RPK0 Q5T7C4 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 0 ; 99.705 3.1973e-05 13178600.0 3630.3 3529.4 3480.2 4485.0 4416.0 4599.1 3425.6 3690.0 4718.0 4135.2 4184.0 False True 3998.8453835143905 3826.834924430377 3716.387300142692 4762.028263825966 4105.835394372956 4561.646454426743 3555.9630825602444 3616.400055250998 4519.718867286954 3874.102766282354 3669.3945245612613 1.0897834388610803 1.0429063701968488 1.0128066838457632 1.2977694908386412 1.1189408407546144 1.2431605334049398 0.9690871501437749 0.9855577074213354 1.2317342376334863 1.0557880163473479 1.0 11.841326312723217 -11.19249042252199 1.6229652779664048 1.000059655869543 1.1262883446048113 0.059768386260215856 0.10550456168064332 0.6014699811631118 2.8511941491888035 0.07985662514042956 0.016762698135667997 6.419623785213647e-12 11.19249042252199 0.12622868873526838 IKGS(ph)SPGIQDTLEAEDGAFETDEAPEDR ddPTM_A549_MK2206_60min_R1 2 IKGSSPGIQDTLEAEDGAFETDEAPEDR 28 1 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 IKGS(0.5)S(0.5)PGIQDTLEAEDGAFETDEAPEDR;IKGS(0.581)S(0.419)PGIQDTLEAEDGAFETDEAPEDR 157.74 4.2058999999999994e-46 94050000.0 3184.2 3639.0 3485.4 3306.1 4669.4 3722.3 3134.3 3341.8 5032.6 4398.1 4707.700000000001 True False 3721.615113784322 3824.209556574291 3979.6821295670193 4116.094648416466 3982.5374455167785 4116.191315337232 3703.7617389636544 3815.510383833281 3892.7241354107996 3404.5661553868936 3538.64816408978 1.0517053239571235 1.0806978764892168 1.124633460300703 1.1631827911535868 1.125440354859686 1.1632101086251982 1.0466600710829201 1.0782395442850465 1.1000596710670998 0.9621092568445907 1.0 11.788982611229942 -10.741391697591101 0.43997545324225296 0.9708788320232934 1.1120233250597011 0.5973079241393633 0.03850197111416246 1.2471853091603808 0.3074659362809837 0.07909918297272327 0.01069033527745845 1.8138789564685625e-11 10.741391697591101 0.14114449303640775 IKGSS(ph)PGIQDTLEAEDGAFETDEAPEDR ddPTM_A549_PD325901_60min_R1 2 IKGSSPGIQDTLEAEDGAFETDEAPEDR 28 1 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 IKGS(0.143)S(0.857)PGIQDTLEAEDGAFETDEAPEDR;IKGS(0.127)S(0.872)PGIQDT(0.001)LEAEDGAFETDEAPEDR 240.26 1.0848999999999996e-120 136213000.0 5173.0 6018.200000000001 5960.200000000001 6359.5 6824.5 6432.4 6621.4 6846.6 6070.6 6931.7 7709.200000000001 True False 5698.159151838673 6525.374834874735 6364.695013594184 6752.311871527584 6345.17066324689 6380.016667055423 6873.381000369104 6710.039191946204 5815.473793080157 6494.031279028676 6761.017272645236 0.8427961240231056 0.9651468960560271 0.9413812680741768 0.9987124125310443 0.9384934851326528 0.9436474438349205 1.0166193522650042 0.9924599984524094 0.8601477497490349 0.9605109730015374 1.0 12.723024617528315 -5.25570613743094 24.072958584507507 0.9484899383030063 0.8427960459656131 0.35533990755098244 0.042800575324986274 437.4593338233806 1836724.9922525377 0.0076707296157375844 0.09240728010162867 5.550011238762114e-06 5.25570613743094 -0.10569389233739324 IKIEHAPS(ph)PSSGGTLK ddPTM_A549_MK2206_60min_R1 1 IKIEHAPSPSSGGTLK 16 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 IKIEHAPS(0.926)PS(0.065)S(0.008)GGTLK 79.51100000000001 0.00013807 9257500.0 2123.9 1953.5 2001.6 2133.1 2472.4 1950.2 2063.3 1919.1 3077.6 2643.7 2570.4 True False 2482.362395630465 2052.9248059268702 2285.4569778336313 2655.7095957584984 2108.713235168475 2156.568869562012 2438.1749022122044 2191.13830199726 2380.528513917313 2046.4863338706089 1932.098740568933 1.2848010008533515 1.062536175207256 1.182888291289216 1.3745206391348759 1.0914106980617022 1.1161794292806073 1.2619307962978386 1.1340715958191916 1.2320946460615847 1.059203803045797 1.0 10.915953110144795 -10.829128682022802 0.8975451957389837 0.9907361211538306 1.192429287044729 0.32784353337204697 0.08916805554774611 0.5232689206324594 0.6899959211734515 0.07347539949888951 0.015074287039873556 1.482078878171036e-11 10.829128682022802 0.20169316589089847 IKIEHAPS(ph)PSSGGTLK ddPTM_A549_PD325901_60min_R1 3 IKIEHAPSPSSGGTLK 16 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 IKIEHAPS(0.865)PS(0.113)S(0.022)GGTLK;IKIEHAPS(0.8)PS(0.198)S(0.001)GGTLK;IKIEHAPS(0.981)PS(0.019)SGGTLK 125.28 1.1816e-08 43897500.0 8453.3 9739.8 9803.6 10415.9 12800.1 11762.3 11415.0 11536.2 11439.400000000001 11380.6 11962.4 True False 9311.472793009443 10560.607127831066 10468.931249835892 11059.266486774766 11901.065133947764 11666.51172857814 11849.404071527673 11306.10144102617 10958.641799585077 10662.026973774648 10491.100635901443 0.8875591909913425 1.0066252812113694 0.9978868388708726 1.0541569345859683 1.134396241822455 1.1120388730858553 1.1294719670287023 1.077684966850449 1.0445655017437987 1.016292507698218 1.0 13.356878420539985 -5.051505606789183 1.2805850165105532 1.0483023085935377 0.7535557181532768 0.5383142271350276 0.04671544320627217 1.7082098272154087 1.6796977955617955 0.008309439923906365 0.7466895133975973 8.881665099186077e-06 5.051505606789183 -0.29474659044026086 IKIIAPPER ddPTM_A549_MK2206_60min_R1 1 IKIIAPPER 9 1 P60709;P63261;P63267-2;Q562R1;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTBL2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 85.676 0.0056837 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IKIIAPPER ddPTM_A549_PD325901_60min_R1 1 IKIIAPPER 9 1 P60709;P63261;P63267-2;Q562R1;A0A2R8YFE2;P68133;P68032;P63267;P62736;A6NL76 P60709;P68133 ACTB;ACTG1;ACTG2;ACTBL2;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 82.26100000000001 0.0076277 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IKIPS(ph)TPRYPR ddPTM_A549_MK2206_60min_R1 1 IKIPSTPRYPR 11 2 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 IKIPS(0.5)T(0.5)PRYPR 40.725 0.019903 3700400.0 912.77 911.01 1227.9 859.96 1266.8 788.96 990.93 1013.0 1358.9 1414.3 1356.4 True False 1066.8232609160593 957.376517761678 1402.0346837939228 1070.6502386050709 1080.455398119813 872.4472235307371 1170.9691541943184 1156.5958521823898 1051.1113197173897 1094.8086477259915 1019.568445264434 1.0463478600883627 0.9390017141157934 1.3751256134945338 1.0501013870896998 1.059718357446407 0.8557024568413946 1.1484948947106903 1.1343974576247469 1.0309374761444043 1.0737961269898297 1.0 9.993742913698814 -6.504018293589489 24.605178889247927 1.025930144105007 1.1204711646363978 0.06066124058307043 0.12179315445892941 1066.3949988691288 1391208.0231506573 0.016262348268473642 0.037225848730905335 3.1331537451217764e-07 6.504018293589489 0.0945410205313908 IKIPS(ph)TPRYPR ddPTM_A549_PD325901_60min_R1 1 IKIPSTPRYPR 11 2 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 IKIPS(0.5)T(0.5)PRYPR 40.725 0.019903 4482200.0 1015.3 843.78 1089.5 1294.8 985.29 1343.4 1389.4 1399.8 1389.1 1366.7 982.19 True False 1118.3725085756437 914.8883018461676 1163.4400216957254 1374.7768552958432 916.0866294659714 1332.4597958028498 1442.2743773088537 1371.8798908781432 1330.720957725372 1280.4063287575195 861.386856615398 1.2983394162409279 1.0621108214269603 1.3506591292409185 1.5960039844323624 1.0635019822167968 1.5468773241310112 1.6743631113387387 1.5926408446358222 1.5448586747122006 1.4864474874721827 1.0 9.750517500305449 -10.844377518191378 1.1252929323418828 1.003180575791527 1.421863550047131 0.0 0.24284674071726509 0.4380481313045807 0.9964565245361774 0.14044869412121888 0.03547702247642294 1.4309434854494972e-11 10.844377518191378 0.41868297425560397 IKIPST(ph)PR ddPTM_A549_MK2206_60min_R1 2 IKIPSTPR 8 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 IKIPS(0.088)T(0.912)PR;IKIPS(0.163)T(0.837)PR 61.593 0.0042609 22181000.0 5606.8 4720.3 4943.299999999999 4520.799999999999 6182.2 5414.6 4912.9 4906.8 7478.099999999999 6971.0 7730.9 True False 6553.09076690093 4960.54310796857 5644.334271845017 5628.396202946421 5272.806569510819 5987.569378079413 5805.510336392351 5602.35392644477 5784.322290071829 5396.246258430233 5811.104168014461 1.1276842709119757 0.8536317650735712 0.9713015132154436 0.9685588212178844 0.9073674153930082 1.0303668984349401 0.9990373892017115 0.9640773533679372 0.9953912583274545 0.928609452250453 1.0 12.504596600850983 -7.281596581482216 24.82818164355091 0.9970958794113726 0.9599512924413806 0.005616285422347156 0.06695239941592684 1451.053083844484 1787297.3776270882 0.008450329754631968 0.013518415279370782 5.2288167112271684e-08 7.281596581482216 -0.03714458696999201 IKIPST(ph)PR ddPTM_A549_PD325901_60min_R1 2 IKIPSTPR 8 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 IKIPS(0.158)T(0.842)PR;IKIPS(0.019)T(0.981)PR 87.149 0.0010762 28019000.0 5484.200000000001 5519.5 6145.4 5624.7 6434.299999999999 5338.2 6108.6 6086.299999999999 7120.1 7442.9 7390.200000000001 True False 6040.951946745345 5984.647635686934 6562.463799292254 5972.124944379461 5982.376965129964 5294.727469074569 6341.06611575418 5964.903971890017 6820.866957814718 6972.954023786741 6481.252250337622 0.9320655505162075 0.9233782924241501 1.0125302249963195 0.9214461517168014 0.9230279480046977 0.8169297019412808 0.9783705171209561 0.9203320194148117 1.0523995509447122 1.075865242465066 1.0 12.662056869502182 -8.754355052293825 24.999041732114172 1.0247442334429055 0.928664126233128 0.5124024543001313 0.04877786986745692 106.18810458003483 374714.19201152795 0.00810075190136653 0.009090441774898296 1.7605361524932142e-09 8.754355052293825 -0.09608010720977755 IKLPS(ph)FR ddPTM_A549_MK2206_60min_R1 1 IKLPSFR 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 IKLPS(1)FR 43.282 0.025207 10374000.0 652.5 1523.7 1166.3 631.35 1483.6 713.25 466.08 966.03 1090.0 1144.4 1182.5 True False 762.6260479066234 1601.2498217511002 1331.6988775216657 786.0307783423785 1265.3644053130356 788.725641582968 550.7607029627605 1102.9677108427986 843.1167403723267 885.8792451796817 888.8526146602725 0.8579893171581725 1.8014795651617814 1.4982223774305408 0.8843207134433717 1.4235930506844146 0.8873525583140981 0.6196310770523707 1.2408893135386263 0.948545041626022 0.9966548228226484 1.0 9.795800407787503 -6.654471231571874 1.3485064732274008 0.9710841943383988 1.3975351632860833 0.22095276566462996 0.2914745544485651 0.42012059341205166 1.5044512089601536 0.041191430355046806 0.1219071161920784 2.2157908693246884e-07 6.654471231571874 0.42645096894768453 IKLPS(ph)FR ddPTM_A549_PD325901_60min_R1 2 IKLPSFR 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 IKLPS(1)FR;IKLPS(1)FR 67.563 0.0065323 53358000.0 2612.3 3269.1 3743.3 2801.2 3671.9 3434.4 3249.5 3538.7999999999997 2794.3 3174.3999999999996 3752.5 True False 2877.49877292638 3544.5985299074496 3997.342848291518 2974.2237620132187 3413.9984113673167 3406.4313850716903 3373.1615006946304 3468.215857865106 2676.8652884400058 2973.9678422535076 3290.9662890573923 0.8743628831733068 1.0770692309105065 1.214641080214908 0.9037539436069715 1.0373848017583807 1.0350854690910158 1.0249760114257447 1.0538594301002342 0.8133979668344524 0.9036761792857257 1.0 11.684295532984326 -8.735235432754262 24.993364960264014 0.9118823529345923 1.0318769932290794 0.2535315044246399 0.092821436057665 244.98126956192684 233663.47418067913 0.01730507173281485 0.01961914848837406 1.8397743821263604e-09 8.735235432754262 0.11999464029448714 IKNENTEGS(ph)PQEDGVELEGLK ddPTM_A549_MK2206_60min_R1 7 IKNENTEGSPQEDGVELEGLK 21 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 IKNENTEGS(1)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENT(0.003)EGS(0.997)PQEDGVELEGLK;IKNENT(0.001)EGS(0.999)PQEDGVELEGLK;IKNENT(0.008)EGS(0.992)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENT(0.032)EGS(0.968)PQEDGVELEGLK 306.0 6.416099999999999e-164 988952600.0 41420.09 46319.8 42186.48 40448.88999999999 56701.5 44193.93 44209.38 44435.29 62173.600000000006 66643.6 62811.399999999994 True False 48410.788568025535 48677.27997213795 48169.1572173456 50358.86986581968 48360.78446202288 48870.5023390435 52241.65209051625 50734.12843486837 48091.37887083753 51588.76447400972 47213.595873549435 1.0253569479791902 1.0310013264507252 1.0202391138848101 1.0666179716684603 1.024297844026664 1.0350938418232685 1.1064959388061286 1.0745660756437163 1.0185917420829167 1.0926675572896025 1.0 15.52691474496071 -8.944917474451636 6.248726627121363 1.0080457159623404 1.047889231643428 0.0 0.035686599121772196 0.17619682703199935 13.837885197663493 0.004687693011322063 0.004926030251979791 1.1352265133011523e-09 8.944917474451636 0.03984351568108768 IKNENTEGS(ph)PQEDGVELEGLK ddPTM_A549_PD325901_60min_R1 3 IKNENTEGSPQEDGVELEGLK 21 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 IKNENT(0.004)EGS(0.996)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK 318.74 1.0118999999999997e-184 2013450000.0 35892.0 35226.4 37317.7 35595.1 41525.0 36547.8 38330.9 38226.9 41055.0 40027.4 40821.0 True False 39535.729417706105 38195.05235506156 39850.30353155992 37793.72848466255 38608.42725347306 36250.16683418446 39789.60337497332 37464.43449107707 39329.601122608285 37500.0631328812 35800.27578563938 1.1043414764297748 1.0668926849547566 1.1131283951601605 1.05568260733407 1.078439380876505 1.0125666922578722 1.1114328731214462 1.0464845219462033 1.0985837471784121 1.0474797277378423 1.0 15.127683080811098 -10.881156577833274 1.008821067353122 0.997755901818443 1.0766689962837248 0.24434083180381672 0.03210753291343101 0.3735633057227092 0.6425232854495562 0.022042844478501543 0.0047231777215431935 1.3147507346748613e-11 10.881156577833274 0.07891309446528183 IKNENTEGS(ph)PQEDGVELEGLKQR ddPTM_A549_MK2206_60min_R1 1 IKNENTEGSPQEDGVELEGLKQR 23 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 IKNENT(0.008)EGS(0.992)PQEDGVELEGLKQR 70.889 5.9025e-05 7739900.0 1156.5 1679.6 1688.4 1669.9 2058.6 1472.1 1439.3 1563.5 3188.7 2884.4 3188.0 True False 1351.6889262896711 1765.0844658483609 1927.8405082805273 2079.025574964659 1755.7826670109293 1627.8766448991062 1700.8021793990335 1785.1309130179354 2466.464541307558 2232.8120366971993 2396.3316156760666 0.5640658903164055 0.7365777149964219 0.8044965461663093 0.8675867569264251 0.7326960323542608 0.6793202719732262 0.7097524266979192 0.7449431878877516 1.0292667864383642 0.9317625415826539 1.0 11.226611853551217 -8.757818377253667 21.929697387460962 1.013820477372897 0.7349580588262941 0.6936874517926852 0.07545711477281375 6.812058764173948 41254.806235364726 0.012475918109503855 0.013858255133055506 1.7465524116237832e-09 8.757818377253667 -0.2788624185466029 IKNENTEGS(ph)PQEDGVELEGLKQR ddPTM_A549_PD325901_60min_R1 2 IKNENTEGSPQEDGVELEGLKQR 23 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 IKNENT(0.036)EGS(0.964)PQEDGVELEGLKQR;IKNENT(0.001)EGS(0.999)PQEDGVELEGLKQR 108.78 3.8593000000000006e-11 29935000.0 6208.2 6406.1 7599.6 7707.1 8160.799999999999 13236.1 10744.400000000001 10672.5 10526.5 8427.5 9543.0 True False 6838.451893764716 6945.964529209905 8115.354556107239 8183.150062905926 7587.613561231624 13128.309590014966 11153.284021561272 10459.628615085712 10084.107811889806 7895.386211753847 8369.27149806121 0.8170904594681726 0.8299365758201268 0.9696608071547453 0.9777613338032586 0.9066038260306573 1.5686322988872106 1.3326469363725377 1.2497657194546437 1.2048967241922843 0.9433779527385219 1.0 13.030886333736944 -7.079601866995189 24.999926795621445 1.1639786204890743 0.9041813080296018 0.4610399070274144 0.16502883635989105 94.40043315237519 29646.860540289646 0.026381705528704363 0.045694466701249596 8.325266277800998e-08 7.079601866995189 -0.25979731245947246 IKNENTEGSPQEDGVELEGLK ddPTM_A549_MK2206_60min_R1 1 IKNENTEGSPQEDGVELEGLK 21 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 0 114.88 1.5676e-14 2217200.0 1361.0 1109.4 967.76 1010.5 1625.9 1363.1 859.32 1133.3 2188.4 1506.7 1688.7 False True 1590.703526744696 1165.8637213694758 1105.0029200980591 1258.072545363069 1386.7322638167059 1507.342337247449 1015.4473207817524 1293.9487455856886 1692.730894156698 1166.3354235514034 1269.3491842509957 1.253164650421485 0.918473605084023 0.8705271439947296 0.9911162042503058 1.0924750108339767 1.187492264500005 0.799974769260152 1.019379664508319 1.3335423500157895 0.9188452145574288 1.0 10.309873278262357 -8.566100424586782 24.999388968529473 1.1585038137020212 1.0078251418304178 0.0 0.16044000446961781 195.80660312750678 113253.56301108263 0.028125795016121138 0.03189166729035838 2.7158112024818284e-09 8.566100424586782 -0.15067867187160333 IKPAATSHVEGS(ph)GGVSAK ddPTM_A549_PD325901_60min_R1 1 IKPAATSHVEGSGGVSAK 18 1 G3XAG1;Q96ME7-2;Q96ME7-3;Q96ME7 G3XAG1 ZNF512 Zinc finger protein 512 1 IKPAATSHVEGS(0.978)GGVS(0.022)AK 56.882 0.0033461999999999997 3401700.0 1279.7 1479.7 1478.6 1747.2 2010.0 1919.8 1614.4 1833.2 1992.3 2331.5 2199.2 True False 1409.6142019346507 1604.399512007602 1578.946687544101 1855.1205758208978 1868.8245341235622 1904.1657853076604 1675.8368754335766 1796.635387882421 1908.5705594098781 2184.2886921037198 1928.7123418774188 0.7308576667075842 0.8318500779882348 0.8186532813945422 0.9618440943946641 0.968949331399227 0.987273085759453 0.8688889675493588 0.9315206570066153 0.9895568758335758 1.132511388389583 1.0 10.913422273101865 -3.7468897902778187 0.37224794222097385 0.992146916351046 4.681168876614439e-19 0.6730253753328376 0.059895612494834605 5.3795033274532935 0.21223993133465072 0.010895446789681495 3.059234807044571 0.00017910603088431345 3.7468897902778187 -0.992146916351046 IKPNLSS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 IKPNLSSSPR 10 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 IKPNLS(0.077)S(0.462)S(0.462)PR;IKPNLS(0.05)S(0.475)S(0.475)PR 72.958 0.00052468 35247700.0 5346.6 6482.400000000001 6040.900000000001 5169.9 8637.8 6182.9 5557.3 5137.9 8180.0 8222.8 8228.1 True False 6248.975368180156 6812.3264714309435 6897.590456332527 6436.525732085632 7367.191062424466 6837.17037412314 6566.989475143639 5866.213059158842 6327.24306077581 6365.263769017376 6184.835685992543 1.0103704747294866 1.101456338906391 1.1152423130584108 1.0406947021507973 1.1911700547048854 1.1054732447634799 1.061788834587247 0.9484832511306129 1.0230252478826223 1.0291726558610874 1.0 12.594519551948999 -8.026982319376664 6.550111807958057 1.0063322858647006 1.096421721584978 0.46507544136039947 0.046850423653797865 0.12208181813552235 19.014948188412237 0.007095806388243584 0.009358384916323763 9.397615685503978e-09 8.026982319376664 0.0900894357202775 IKPNLSS(ph)SPR ddPTM_A549_PD325901_60min_R1 3 IKPNLSSSPR 10 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 IKPNLS(0.064)S(0.564)S(0.372)PR;IKPNLS(0.035)S(0.482)S(0.482)PR;IKPNLS(0.134)S(0.78)S(0.086)PR 84.289 0.00025532 77377500.0 9900.0 9452.9 9453.8 9201.8 12043.7 11038.2 10384.8 12219.3 11185.800000000001 11169.0 12805.900000000001 True False 10905.040712005193 10249.529057955433 10095.391718317616 9770.174287195929 11197.792060509428 10948.30855890355 10779.99924678061 11975.576475644593 10715.699725667328 10463.787433886535 11230.855483288495 0.9709893185102316 0.9126222907245779 0.898897838489646 0.8699403444140067 0.9970560192116918 0.9748419054269398 0.9598555749222525 1.0663102640279045 0.95413031906717 0.9316999448044402 1.0 13.455180205283558 -6.776335984595268 24.99999268412562 0.9840297115681539 0.912062103666426 0.4263609414938352 0.03921535584780255 156.18952577479553 262122.56688383792 0.005283901064910732 0.01001432668779064 1.6736475858468266e-07 6.776335984595268 -0.07196760790172785 IKPNLSSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 IKPNLSSSPR 10 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 IKPNLS(0.042)S(0.18)S(0.778)PR;IKPNLS(0.025)S(0.141)S(0.834)PR 73.881 0.00046138 39173600.0 6701.0 8010.6 7783.1 6464.400000000001 9981.7 7311.0 7044.9 6580.4 10448.0 10154.4 10312.3 True False 7831.964976279362 8418.305323960993 8886.860613597597 8048.178290197948 8513.405152678031 8084.645167350973 8324.867139337348 7513.191851629812 8081.544682027592 7860.5139874629185 7751.471304998836 1.0103843087477622 1.086026767399903 1.1464740387888117 1.0382775054598692 1.0982953838954204 1.0429820158319205 1.0739725158975606 0.9692600999225321 1.0425820291453438 1.0140673529157957 1.0 12.92025445865714 -8.21741803599976 23.494695405708725 1.0168564188030758 1.073126698674822 0.39526550507773806 0.03748858408449002 196.56323452732704 104907.96566912322 0.005948260376437108 0.0076791130720433 6.061525883560121e-09 8.21741803599976 0.056270279871746265 IKPNLSSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 IKPNLSSSPR 10 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 IKPNLS(0.004)S(0.033)S(0.963)PR 113.07 3.2732e-05 60322000.0 8758.0 7872.8 7656.3 8096.5 9426.6 7701.5 8136.7 8638.0 8554.6 8237.5 9676.7 True False 9647.105712701165 8536.268485594004 8175.9025590720275 8596.602416514357 8764.508136004562 7638.781537424191 8446.346571073085 8465.708313620087 8195.079911422843 7717.382844179456 8486.527245655343 1.1367554045902553 1.005861200759607 0.9633979038077868 1.0129705788566656 1.0327555526898864 0.9001068772076171 0.9952653572634403 0.9975468255232535 0.965657644664759 0.9093687701445077 1.0 13.050958596930032 -5.270850037764597 3.5029503584537784 0.9837466328797865 1.1537658246588427 0.5729735889088163 0.03947053312963635 0.1258851665278893 2.6869010446969863 0.004264745777913942 0.05565825819076724 5.359817004778752e-06 5.270850037764597 0.17001919177905622 IKQEIIKKFIK ddPTM_A549_MK2206_60min_R1 1 IKQEIIKKFIK 11 3 Q5VIR6-2;Q5VIR6-3;Q5VIR6-1;Q5VIR6;I3L184 Q5VIR6-2 VPS53 Vacuolar protein sorting-associated protein 53 homolog 0 0.0 0.060615999999999996 4322100.0 241.28 194.1 164.08 131.88 282.79 0.0 312.95 166.89 256.09 280.76 359.93 False True 282.0021652703601 203.97886093186872 187.34901125246927 164.19060592031815 241.19196560964778 0.0 369.808964109586 190.54716857918964 198.08602389169653 217.33612100371164 270.5494474373545 1.0423313296016155 0.7539429958699134 0.6924760446825521 0.6068783635506643 0.891489403856556 0.0 1.3668812396861942 0.7042970162536025 0.732161997623607 0.8033138602289537 1.0 8.079748484577985 -10.898731367280783 0.5289360366942728 1.065134038755573 0.7372972267051449 0.014433344184224928 0.31809566392791383 3.307410299349182 1.1317321497706603 0.5623613469409275 0.06689182549992423 1.2626082790667658e-11 10.898731367280783 -0.32783681205042814 IKQHLENDPGS(ph)NEDTDIPK ddPTM_A549_MK2206_60min_R1 1 IKQHLENDPGSNEDTDIPK 19 1 K7EML9;K7ER96;O43396 K7EML9 TXNL1 Thioredoxin-like protein 1 1 IKQHLENDPGS(1)NEDTDIPK 120.29 1.0588e-14 5312700.0 1215.4 1552.6 1650.8 1107.1 2113.6 1719.2 1510.9 1400.6 2575.0 2142.5 2042.6 True False 1420.5298063229277 1631.6207083092186 1884.9082628935655 1378.3395496996075 1802.6922398689892 1901.1246028874 1785.4109725936214 1599.1393391576066 1991.7666114300391 1658.507761969126 1535.366047107884 0.9252059526773636 1.0626916697699849 1.2276605089998585 0.8977269963054987 1.1741123514256802 1.2382223812155302 1.1628568809091084 1.0415362135758115 1.2972584714777697 1.0802034896454822 1.0 10.584366934648878 IKQHLENDPGS(ph)NEDTDIPK ddPTM_A549_PD325901_60min_R1 2 IKQHLENDPGSNEDTDIPK 19 1 K7EML9;K7ER96;O43396 K7EML9 TXNL1 Thioredoxin-like protein 1 1 IKQHLENDPGS(0.999)NEDT(0.001)DIPK;IKQHLENDPGS(1)NEDTDIPK 159.51 3.739199999999999e-27 19494000.0 4010.9 3668.5 3951.3 4178.5 4449.8 4132.3 4400.3 4936.5 4607.6 4489.1 5261.5 True False 4418.083615331481 3977.6573696018672 4219.458979097123 4436.596454937966 4137.261398976631 4098.647918859699 4567.755824436551 4838.0376348906675 4413.958595360615 4205.657459885401 4614.3688553965285 0.9574621695369041 0.862015476927029 0.9144173583267935 0.9614741677508817 0.8966039622381038 0.8882358665511337 0.9898982867601789 1.0484722367247596 0.9565682184679422 0.9114263709037614 1.0 12.17191761694088 -7.77132014942373 24.975071376296718 0.9859502727497846 0.9125062713312112 0.40441095593510756 0.04084660246329312 124.7708245355807 315375.81794328993 0.005515285809233433 0.007670158384850911 1.693089243520944e-08 7.77132014942373 -0.07344400141857343 IKQS(ph)ASGTK ddPTM_A549_PD325901_60min_R1 1 IKQSASGTK 9 1 Q01813;Q01813-2;B1APP6;H0Y3Y3;P17858;P17858-2 Q01813;P17858 PFKP;PFKL ATP-dependent 6-phosphofructokinase, platelet type;ATP-dependent 6-phosphofructokinase, liver type 1 IKQS(0.931)AS(0.057)GT(0.011)K 40.725 0.026711000000000002 2565900.0 2609.7 2943.5 1996.1 2117.9 2929.6 2328.9 1891.8 2401.5 2243.8 2842.3 2993.8 True False 2874.6348228403995 3191.5590752141466 2131.5673495244014 2248.717872900113 2723.8350025713366 2309.9342105443334 1963.793484232681 2353.600198559695 2149.500889024686 2662.836692930047 2625.581579261829 1.0948564103076128 1.2155627158655795 0.811845789276021 0.8564646745930973 1.037421584644546 0.8797800185640248 0.7479460930651384 0.8964109960054638 0.8186761005647399 1.0141892805626294 1.0 11.358421306901475 -5.7580327798555615 24.9999989803954 0.8973966747192816 1.1552096223307242 0.5531470965658576 0.0898979841433987 48.56172779214937 356362.10773675033 0.012924811198384812 0.04629980044703219 1.7456903860187443e-06 5.7580327798555615 0.2578129476114426 IKQS(ph)SQDNELK ddPTM_A549_MK2206_60min_R1 1 IKQSSQDNELK 11 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IKQS(0.592)S(0.408)QDNELK 50.806000000000004 0.0071938 18457000.0 1606.3 2082.2 2012.4 1321.1 2388.1 1500.9 1491.1 1773.6 2750.3 2498.8 2920.9 True False 1877.4041697354944 2188.175086204724 2297.788580232016 1644.7695593064332 2036.8136534969408 1659.7242417832124 1762.0135688889725 2025.0132314221996 2127.361441326615 1934.3193445080287 2195.559917261047 0.8550912935582963 0.996636470269718 1.0465615454933697 0.7491344446469388 0.9276966834218119 0.755945774348856 0.8025349502131002 0.9223220079315332 0.9689380028309548 0.881014145549298 1.0 11.10037319109459 -8.68344469569877 3.0903927272510114 0.9862570175795038 0.8791385501747471 0.07588151229713358 0.09267024886850275 0.28228912602619766 5.377779141344627 0.01568805984300033 0.017511044256878962 2.0727899977825466e-09 8.68344469569877 -0.10711846740475672 IKQS(ph)SQDNELK ddPTM_A549_PD325901_60min_R1 1 IKQSSQDNELK 11 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IKQS(0.5)S(0.5)QDNELK 44.43600000000001 0.015671 25788000.0 6995.8 6961.5 7279.3 7380.1 9863.4 8361.1 8340.0 8591.3 7979.8 9508.5 9958.9 True False 7706.008465964236 7548.170036386373 7773.31707198687 7835.952015576815 9170.628810882756 8293.009973713875 8657.383263823116 8419.93978175553 7644.4367565019975 8908.131687269239 8734.01843466853 0.8822981682035679 0.864226483244518 0.8900046559475668 0.8971760334822562 1.0499896330057148 0.9495068090073947 0.9912256687550349 0.964039616442037 0.8752485254849496 1.0199350681365167 1.0 13.092429860842861 -6.543494733091545 24.991879767706852 0.9531610476695587 0.8800828811658514 0.43850329133499766 0.04674318606644845 232.29650768317478 281602.3704518128 0.007783473814925114 0.016203990378854206 2.860917056202425e-07 6.543494733091545 -0.07307816650370724 IKQSS(ph)QDNELK ddPTM_A549_MK2206_60min_R1 1 IKQSSQDNELK 11 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IKQS(0.062)S(0.938)QDNELK 107.69 3.7387e-05 14819000.0 4176.5 4937.7 4299.9 3706.3 5699.8 4484.0 3780.4 4639.7 6633.2 6266.7 6040.6 True False 4881.391094378562 5189.007839378098 4909.690477111726 4614.343666382131 4861.366970479404 4958.493903761691 4467.249745709789 5297.391683485328 5130.790791043777 4851.048117587829 4540.552307921219 1.075065490570989 1.1428142409736401 1.0812980765680262 1.0162516261143342 1.07065542709386 1.0920464224388193 0.9838560251616196 1.1666844304918071 1.1299926623668353 1.068382828477702 1.0 12.148652080732319 -10.990575998623669 1.3013339090991805 1.0005819862291208 1.0880329433582532 0.0653754497672423 0.05359367419912089 0.4639104048586397 1.4131006625053584 0.0351230578172647 0.00827515693362564 1.0219367128762719e-11 10.990575998623669 0.08745095712913242 IKQSS(ph)QDNELK ddPTM_A549_PD325901_60min_R1 1 IKQSSQDNELK 11 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IKQS(0.253)S(0.747)QDNELK 133.47 1.8289e-08 31764000.0 7351.9 7092.9 7892.0 7785.2 9550.4 7886.7 8900.0 8036.2 8606.9 7436.9 10064.0 True False 8098.259475817272 7690.643575534719 8427.598578451272 8266.074122527954 8879.612851091377 7822.473330027047 9238.694370266869 7875.9116867230605 8245.181924300996 6967.332864810708 8826.191800952318 0.9175258886786819 0.8713433549795421 0.9548397279948031 0.9365391449612586 1.0060525593986407 0.886279553678295 1.0467361891308598 0.8923340738950716 0.9341720767286483 0.7893928686275495 1.0 13.107575383355563 -6.9289192753752245 0.009277205880386758 1.8718655627774499 2.2179016934294115e-07 0.0 0.0765200212077574 3632.760529801565 9.400491904432963 914.366236301311 982.6008086023577 1.1778248817493851e-07 6.9289192753752245 -1.8718653409872805 IKRHT(ph)PLSK ddPTM_A549_PD325901_60min_R1 2 IKRHTPLSK 9 2 A8MUA9;A8MU27;P55854;P55854-2;P61956-2;P61956 A8MUA9;P61956-2 SUMO3;SUMO2 Small ubiquitin-related modifier 3;Small ubiquitin-related modifier 2 1 IKRHT(0.998)PLS(0.002)K;IKRHT(1)PLSK 64.878 0.0020984000000000003 10784700.0 4547.5 4933.0 4304.1 4774.0 5615.6 6529.1 4550.0 5671.299999999999 5775.1 5859.799999999999 5189.0 True False 5009.158852307439 5348.721222365003 4596.202108655867 5068.879137459343 5221.179628768296 6475.929174316203 4723.152739855537 5558.181472451215 5532.392630451225 5489.811227960276 4550.785895781161 1.1007239116547354 1.1753401159398804 1.0099798614821254 1.1138469823769304 1.14731383728877 1.4230353443610166 1.0378762807176163 1.2213673857089096 1.2157004871576291 1.2063435533299083 1.0 12.151899997015024 -4.2318407762027785 16.17686637043066 1.1279385255127485 1.1393858520913103 0.0 0.11740212002705668 0.0 0.0 0.016207432991092018 0.0 5.863530976028098e-05 4.2318407762027785 0.011447326578561734 IKS(ph)PESVPVDSNK ddPTM_A549_PD325901_60min_R1 2 IKSPESVPVDSNK 13 1 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 IKS(0.968)PES(0.032)VPVDSNK;IKS(0.793)PES(0.207)VPVDSNK 110.22 1.5484e-05 42024000.0 5469.7 6101.299999999999 6389.200000000001 5771.5 7616.6 5836.7 7402.3 6747.5 6057.700000000001 6012.799999999999 6611.7 True False 6024.979917419675 6615.477963514208 6822.80953338075 6127.992446972476 7081.636291843543 5789.167850351719 7683.998577193982 6612.915819188655 5803.115935219202 5633.150781849132 5798.502815019526 1.0390578584895258 1.1408941539837696 1.1766502062753201 1.056823225315937 1.2212870318007591 0.9983901077630544 1.325169413954679 1.140452290901645 1.0007955709166385 0.9714836676905473 1.0 12.501464726250854 -8.761625412119669 12.058470800633444 1.0003651782372875 1.1405251723098688 0.36693923251686844 0.08541847964903679 0.058349832637523046 397.93220935485937 0.013308997197496458 0.01461338778143567 1.731309004859172e-09 8.761625412119669 0.14015999407258128 IKS(ph)SPSPEVVKPK ddPTM_A549_MK2206_60min_R1 2 IKSSPSPEVVKPK 13 2 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 IKS(0.497)S(0.497)PS(0.005)PEVVKPK;IKS(0.492)S(0.492)PS(0.016)PEVVKPK 64.65 0.0012046 11485400.0 7618.4 8199.2 9852.4 8280.4 11781.599999999999 8389.6 8274.6 7572.2 14047.0 12561.300000000001 12077.8 True False 8904.199668002786 8616.50425838526 11249.618469428502 10309.09837172128 10048.54224699115 9277.381903434238 9777.987711842732 8645.582538889928 10865.376928449614 9723.693605798271 9078.54892967766 0.9807954703967141 0.9491058896227367 1.2391427921541123 1.135544727640446 1.1068445326259788 1.0219014046514192 1.0770430150878645 0.9523088552871738 1.1968186780302341 1.0710625322524443 1.0 13.148246007370721 -11.293196444626165 1.8506907961072556 0.9996755203449947 1.094233493195901 0.0 0.0941415118959289 0.6660282296785195 4.117078154790238 0.07431310430744965 0.014688666273409657 5.091005372834407e-12 11.293196444626165 0.09455797285090628 IKSPES(ph)VPVDSNK ddPTM_A549_MK2206_60min_R1 2 IKSPESVPVDSNK 13 1 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 IKS(0.065)PES(0.935)VPVDSNK;IKS(0.155)PES(0.845)VPVDSNK 101.39 3.9954000000000004e-05 29474000.0 4907.3 4994.4 5259.5 5107.8 6514.2 5106.6 4645.200000000001 5199.0 6547.799999999999 7123.700000000001 6947.0 True False 5735.532268033981 5248.593627192817 6005.376186508789 6359.211229297854 5555.969809308557 5646.977022513264 5489.1727115572785 5935.974171269743 5064.7337546880035 5514.451222375483 5221.868172553837 1.0983678787947895 1.0051179872328928 1.150043621949913 1.2178038623651775 1.063981246886078 1.0814093416210315 1.0511894460316702 1.1367529732882287 0.9699083905082605 1.0560303401298914 1.0 12.350350321553847 -8.768066271822118 24.999362309555647 0.9857900659834649 1.0994514876972878 0.3180530350038301 0.05733392828494602 97.16826499510805 366557.344663121 0.0094381863218336 0.010160812194673357 1.7058220666479576e-09 8.768066271822118 0.11366142171382299 IKT(ph)LGTGSFGR ddPTM_A549_MK2206_60min_R1 1 IKTLGTGSFGR 11 1 Q15136;P17612-2;P17612 Q15136 KIN27;PRKACA cAMP-dependent protein kinase catalytic subunit alpha 1 IKT(0.992)LGT(0.003)GS(0.004)FGR 41.967 0.032975 3988000.0 1744.7 1950.2 2414.2 1913.4 2687.8 2210.1 2211.5 2183.3 2744.6 2843.0 2855.7 True False 2039.1627061803622 2049.4568500223113 2756.569862053334 2382.183085895789 2292.428180507129 2443.9713150543525 2613.3009238803324 2492.789461075827 2122.9524822255853 2200.764325450747 2146.5508766895045 0.9499717562367958 0.9547674235343839 1.2841856636096252 1.109772478148613 1.0679589314196 1.1385573673536877 1.2174418748977747 1.1612999664467796 0.9890063661103092 1.0252560744541273 1.0 11.067804652033333 -8.774088664390534 24.816202561571732 0.9948085466740026 1.1141516697030103 0.19682768041176935 0.09433886322794731 215.4530894745422 422688.5145285592 0.01658493619063439 0.017714264896117334 1.6823305659354896e-09 8.774088664390534 0.11934312302900763 IKT(ph)LGTGSFGR ddPTM_A549_PD325901_60min_R1 1 IKTLGTGSFGR 11 1 Q15136;P17612-2;P17612 Q15136 KIN27;PRKACA cAMP-dependent protein kinase catalytic subunit alpha 1 IKT(0.999)LGT(0.001)GSFGR 61.097 0.0031555 5505000.0 2656.6 2530.7 2947.7 3347.0 3676.0 3097.8 3254.1 3584.2 4265.5 3748.8 3680.7 True False 2926.296076314445 2743.970970492423 3147.7486479600625 3553.7365884114847 3417.8104415115495 3072.5725438723152 3377.9365562118437 3512.7103192494947 4086.2358686758193 3512.100128225791 3227.9972338796897 0.9065361164505604 0.8500536932599779 0.9751398219684416 1.1009106671817972 1.0588021593202315 0.9518510460987689 1.046449643995495 1.08820115531128 1.265873410853151 1.0880121244728087 1.0 11.656423627010815 -5.905944955614149 0.5691497002736319 1.1161529590828274 0.7928987557732329 0.43812190216892044 0.08027537030122188 1.6976128386286307 0.5614797565941941 0.020813901728398015 0.31292131941724577 1.2418096900206449e-06 5.905944955614149 -0.32325420330959453 IKT(ph)PPK ddPTM_A549_MK2206_60min_R1 2 IKTPPK 6 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 IKT(1)PPK;IKT(1)PPK 63.486000000000004 0.023704 27155000.0 8466.6 9442.8 9820.5 7750.5 10288.5 9290.0 8165.3 8369.7 11200.400000000001 11475.3 10784.5 True False 9895.55509150378 9923.398186540191 11213.194569751795 9649.372847933171 8775.075279093542 10273.061633797086 9648.829316644837 9556.130606131253 8663.527283363494 8883.021760058025 8106.41101294182 1.220707298915094 1.2241419995479583 1.3832501894919982 1.1903384657560572 1.0824858578086165 1.2672761863907744 1.1902714161964596 1.1788361817424464 1.0687253914873354 1.0958020443173129 1.0 12.984847609726128 -8.685976209465013 0.5194533079374088 1.0015161343376844 1.2506922477889109 0.48873219089156394 0.07265467442669114 0.34630053559055163 0.21613707289715114 0.025347479177479242 0.02594762091623136 2.0607427971146308e-09 8.685976209465013 0.24917611345122648 IKT(ph)PPK ddPTM_A549_PD325901_60min_R1 2 IKTPPK 6 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 IKT(1)PPK;IKT(1)PPK 73.931 0.018484999999999998 45207000.0 11241.8 11086.7 10461.8 10453.099999999999 11994.099999999999 10006.900000000001 11022.099999999999 10482.9 10710.7 12671.8 11238.400000000001 True False 12383.059260224247 12021.015117777033 11171.800659914032 11098.76424628744 11151.675793398701 9925.407124177127 11441.552047024545 10273.810335824042 10260.566526462562 11871.700385417083 9856.148046087303 1.2563791860999975 1.2196463630179684 1.1334854760373672 1.1260752369373581 1.1314436168423523 1.007026992468657 1.1608543209298299 1.042375813328265 1.0410321028544012 1.2044969626983146 1.0 13.266808211124271 -2.0000000000000004 0.20431865707385555 0.9958577695421816 2.288854980374875 0.2773775413913794 0.07117329889007928 13.780050785608257 0.15475304253370217 0.027350539601720927 5.816901925043652 0.00999999999999999 2.0000000000000004 1.2929972108326933 IKT(ph)VELR ddPTM_A549_MK2206_60min_R1 1 IKTVELR 7 1 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 IKT(1)VELR 44.863 0.03017 1952100.0 465.19 567.83 352.65 379.76 682.15 193.43 466.27 413.44 615.04 649.48 605.81 True False 543.702699196448 596.7301216019737 402.66107275830836 472.80121704807436 581.8066386386406 213.89863421155766 550.9852235033605 472.04638610689807 475.73442201706064 502.7620169165499 455.3706574945788 1.193978334458058 1.3104272569628135 0.8842490532300098 1.0382777398293457 1.277655090557887 0.46972423605072566 1.2099708543691576 1.0366201210769006 1.0447190968221844 1.1040720534843318 1.0 8.8308975219807 -5.751533427464819 24.999630902739845 1.0097780493200978 1.252202869450884 0.1831028604007474 0.19949293935321905 233.03155654105768 588088.6662996268 0.024069449182488555 0.09098505774906898 1.7720116488897535e-06 5.751533427464819 0.24242482013078615 IKT(ph)VELR ddPTM_A549_PD325901_60min_R1 1 IKTVELR 7 1 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 IKT(1)VELR 50.292 0.020806 3656000.0 1053.0 919.91 1006.7 1057.9 1234.2 680.21 1002.1 862.17 828.07 1053.7 1034.3 True False 1159.899784822371 997.434044124426 1075.020715778877 1123.24408033478 1147.5140497588557 674.6705952829069 1040.235463870161 844.9733429907192 793.2690975909936 987.1692021744328 907.0876569679043 1.2787074941572178 1.099600503283795 1.185134322489094 1.2382971719507412 1.2650530970673968 0.7437766241226441 1.1467860419877458 0.9315233610555205 0.8745230866029324 1.088284240879448 1.0 9.825098162978708 -7.240584541757463 24.99534811384748 0.9434579751377239 1.2068561123381178 0.5583183748301563 0.1094593064821188 404.48954180241805 484796.93161114247 0.01439389032399129 0.024913612915792013 5.746659408465002e-08 7.240584541757463 0.26339813720039396 IKTEPSS(ph)PLSDPSDIIR ddPTM_A549_MK2206_60min_R1 4 IKTEPSSPLSDPSDIIR 17 1 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 IKTEPS(0.153)S(0.843)PLS(0.003)DPSDIIR;IKTEPS(0.036)S(0.964)PLSDPSDIIR;IKT(0.002)EPS(0.161)S(0.73)PLS(0.091)DPS(0.016)DIIR;IKT(0.002)EPS(0.192)S(0.8)PLS(0.006)DPSDIIR 202.52 6.072999999999999e-49 78680200.0 8919.94 10965.48 11600.849999999999 10249.66 15135.2 10946.01 10770.05 11030.54 15363.099999999999 16210.9 16073.199999999999 True False 10425.407800404917 11523.576094648057 13246.024970674101 12760.827160124722 12908.832129478202 12104.30951282661 12726.828675214727 12594.152824611992 11883.382379829443 12548.84643104098 12081.780842247354 0.862903237240452 0.953797808875379 1.0963636192071653 1.0562041578757075 1.0684544189329135 1.0018646812811303 1.0533901286068508 1.0424086472892296 0.9835787070624428 1.038658670844318 1.0 13.5605455016727 -5.44091881100912 3.9912686500245163 1.0150165487764486 0.8698836214855047 0.6261305985083995 0.03788065849114126 0.13837725940230006 3.829725798432278 0.005949123141479113 0.04031728847448111 3.6231072410496963e-06 5.44091881100912 -0.14513292729094396 IKTEPSS(ph)PLSDPSDIIR ddPTM_A549_PD325901_60min_R1 4 IKTEPSSPLSDPSDIIR 17 1 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 IKT(0.001)EPS(0.179)S(0.82)PLS(0.001)DPSDIIR;IKTEPS(0.108)S(0.891)PLSDPSDIIR;IKT(0.017)EPS(0.156)S(0.827)PLSDPSDIIR;IKT(0.004)EPS(0.127)S(0.868)PLSDPSDIIR 185.71 7.4004e-40 232102800.0 23276.8 20657.1 24863.5 22736.1 27852.6 28758.8 24943.5 27138.4 27574.9 27203.0 27314.9 True False 25639.843600525503 22397.946313098746 26550.88662637143 24140.457259570467 25896.32946225367 28524.59786774976 25892.738542106938 26597.103322337054 26416.022847297816 25485.397937506983 23955.340463417375 1.0703184803271972 0.9349876010864069 1.1083493748259499 1.0077275794278853 1.0810253146600197 1.190740658072056 1.080875414050082 1.110278660533085 1.10271957468683 1.063871247266395 1.0 14.548059697356774 -4.879608475930093 20.69154076169563 1.0602304505559943 4.201851873714855 0.0 0.06508764777188997 15064.925967496087 2393287.685641009 0.00928818061214239 170065.64891232204 1.3194457059153679e-05 4.879608475930093 3.1416214231588606 IKVEPVALAPS(ph)PVIPR ddPTM_A549_MK2206_60min_R1 2 IKVEPVALAPSPVIPR 16 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 IKVEPVALAPS(1)PVIPR;IKVEPVALAPS(1)PVIPR 90.464 2.9265e-06 7697500.0 3081.5 3101.7 3211.2 2940.0 4672.6 3550.3 3517.9 3610.3 4329.2 4329.4 4966.0 True False 3601.581864558255 3259.563281568147 3666.5964464525186 3660.3001319816162 3985.266729755794 3925.9903895015946 4157.05689356483 4122.071081080045 3348.643112311815 3351.3855331011123 3732.8051453724406 0.9648459333654575 0.8732208499040001 0.98226301766595 0.9805762662214745 1.0676332073471153 1.0517533695453258 1.1136549409010363 1.1042824151135178 0.8970848951124943 0.8978195760514919 1.0 11.866044485737586 -5.879875314201242 8.036654884340136 0.9896671127347686 0.9193891813531093 0.14101441800114523 0.07376054233597733 0.41596291341166125 27.305677906800945 0.011635724654013104 0.03648574270347183 1.3186352639545105e-06 5.879875314201242 -0.07027793138165928 IKVEPVALAPS(ph)PVIPR ddPTM_A549_PD325901_60min_R1 2 IKVEPVALAPSPVIPR 16 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 IKVEPVALAPS(1)PVIPR;IKVEPVALAPS(1)PVIPR 93.583 2.1092e-06 20822000.0 7159.3 6129.1 6813.799999999999 6667.2 8963.2 7688.9 7760.1 6611.6 7947.3 7462.6 7887.799999999999 True False 7886.106865601897 6645.62076707832 7276.225442707963 7079.01780169018 8333.655753361345 7626.284147646667 8055.414851989659 6479.726451300139 7613.302618480203 6991.4101624247205 6917.650604883917 1.1399978570808769 0.9606759789785361 1.0518347714137064 1.0233268787371737 1.2046945168750958 1.1024384698270897 1.164472638485452 0.9366946701132028 1.100561889191852 1.010662515607355 1.0 12.756066432901576 -4.875274821076898 18.04107371626585 1.0564645543986757 16.002296641110252 0.08740553259906714 0.07840566619136113 424.2350479271418 61427.70605889081 0.01037805774050662 270.53977767780964 1.3326778481857097e-05 4.875274821076898 14.945832086711576 IKWDEQTSNTKGDDDEES(ph)DEEAVK ddPTM_A549_MK2206_60min_R1 4 IKWDEQTSNTKGDDDEESDEEAVK 24 2 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK 238.12 2.1275999999999996e-99 78377000.0 9192.7 8590.4 6380.5599999999995 6404.7 14471.8 10887.0 10166.400000000001 9741.400000000001 14942.0 12733.900000000001 13986.599999999999 True False 10744.203020063174 9027.614667434958 7285.419351761667 7973.851787517906 12343.017390677529 12039.055113794288 12013.503283986893 11122.273281786323 11557.660857470917 9857.30314592236 10513.34120947768 1.021958938265732 0.8586817917881946 0.69296898165865 0.7584507749381855 1.174033748619365 1.1451216957498906 1.142691276219289 1.0579199381220212 1.0993328026918592 0.9375994699987568 1.0 13.359933619762373 -6.756232474536613 24.99999999985161 1.071019681510481 0.8248451373196567 0.5902227665621668 0.09856064048754737 69.71370725448105 334713.6773084163 0.014000358440467486 0.028473431030108094 1.7529419141660586e-07 6.756232474536613 -0.2461745441908244 IKWDEQTSNTKGDDDEES(ph)DEEAVK ddPTM_A549_PD325901_60min_R1 3 IKWDEQTSNTKGDDDEESDEEAVK 24 2 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK 266.57 4.3158999999999987e-125 180801000.0 13204.199999999999 11575.899999999998 11075.7 12503.300000000001 11967.8 13574.1 12016.0 10713.5 15196.3 15486.0 16476.3 True False 14544.68066358171 12551.441718624588 11827.36360559462 13275.600443945415 11127.223014668642 13463.55703007852 12473.2754554075 10499.81083792184 14557.652357556746 14508.2113171427 14449.819551871107 1.0065648647977974 0.8686227307938459 0.8185128930598372 0.9187381473027708 0.7700596519371605 0.9317456859407718 0.8632132332609188 0.7266395819152094 1.0074625710929155 1.0040410030770268 1.0 13.818763856133799 -8.821570548092014 24.999959036875524 1.003524247126531 0.8627724766090495 0.42846061962718407 0.0724349938103428 44.68976281747084 18579.768961843547 0.011721968395548826 0.01247898643482386 1.5080976107641917e-09 8.821570548092014 -0.14075177051748156 IKYPENFFLLR ddPTM_A549_PD325901_60min_R1 1 IKYPENFFLLR 11 1 P62140;C9J9S3;C9JP48;A0A087WYY5;E7ETD8;F8VR82;F8VYE8;P62136-3;P62136;P62136-2;E9PMD7;F8W0W8;P36873;P36873-2 P62140;P62136-3;F8W0W8 PPP1CB;PPP1CC;PPP1CA Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit 0 53.967 0.020035 1525100.0 2163.4 1917.8 2005.3 2101.3 2563.9 2425.7 1927.0 2358.7 2687.9 2258.7 2640.1 False True 2383.026775389096 2079.419736519686 2141.3917168484963 2231.092528601448 2383.820508974826 2405.9459034382708 2000.3330394948612 2311.6538781356467 2574.9369104240373 2116.085296527847 2315.3844369727976 1.0292143012348896 0.8980883274996792 0.9248536366808336 0.9635948540443869 1.0295571097867031 1.0391129287298293 0.8639312796410413 0.9983887950624613 1.1120990835502835 0.9139239526436826 1.0 11.177036037226554 -8.53063853819802 24.2566917230571 1.05305717704177 0.9629494375103305 0.0 0.07119168889238116 120.50478749209844 376689.2691489737 0.010836171282525934 0.012299450900688817 2.94687328589599e-09 8.53063853819802 -0.09010773953143958 ILAPYTDFHYRHS(ph)PDTAEGQLKEDR ddPTM_A549_MK2206_60min_R1 1 ILAPYTDFHYRHSPDTAEGQLKEDR 25 2 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ILAPYTDFHYRHS(0.998)PDT(0.001)AEGQLKEDR 83.559 4.631100000000001e-07 4810800.0 916.74 1330.6 1321.0 1361.7 2025.6 1987.0 1522.0 1494.0 2406.9 1770.0 1596.8 True False 1071.463299858878 1398.3218565478853 1508.3376637281322 1695.316561129037 1727.6369232960935 2197.2630211361475 1798.5276989128938 1705.7790751831114 1861.7409930294984 1370.1557706816125 1200.2704905619646 0.8926848641902548 1.1650056112711673 1.256664789802448 1.4124454233106178 1.4393729887395772 1.8306398752729418 1.4984353219171673 1.4211622201796101 1.5511011956628498 1.1415391625933484 1.0 10.229143850010644 -5.372365740447583 1.5735019541239232 1.3543704164570696 0.7857573418628261 0.3414159596688614 0.2080824631716432 1.045419989548466 2.8297341796807336 0.038316601329492515 0.849984771850006 4.2426212174723115e-06 5.372365740447583 -0.5686130745942435 ILAPYTDFHYRHS(ph)PDTAEGQLKEDR ddPTM_A549_PD325901_60min_R1 1 ILAPYTDFHYRHSPDTAEGQLKEDR 25 2 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ILAPYTDFHYRHS(0.996)PDT(0.004)AEGQLKEDR 108.75 1.0180000000000001e-12 5500400.0 2004.8 1782.7 1743.7 1723.5 2266.3 2014.6 1685.1 2120.2 2416.6 1894.8 1366.1 True False 2208.3258201442445 1932.9343853861938 1862.0379677199041 1829.956680647502 2107.12290631056 1998.1937655385018 1749.227402622101 2077.9109477352767 2315.038705952872 1775.1620046314079 1198.0783604213996 1.8432231923189992 1.6133622384318198 1.554187129350179 1.5274098432124692 1.7587521617279047 1.667832281717932 1.460027541109119 1.734369817850991 1.9322932309190566 1.4816743739591716 1.0 10.226506555471795 -10.91559652842322 1.1439667143673218 0.9962433594171183 1.6863166878116813 0.35942319058773775 0.1897852234673307 0.19818163396657956 0.4566015747030482 0.1090254836101275 0.02525554826793445 1.2145166460383819e-11 10.91559652842322 0.690073328394563 ILAT(ph)PPQEDAPSVDIANIR ddPTM_A549_MK2206_60min_R1 2 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILAT(0.846)PPQEDAPS(0.154)VDIANIR;ILAT(0.944)PPQEDAPS(0.056)VDIANIR 94.384 2.7424e-06 4261400.0 668.92 715.9200000000001 803.76 468.43 901.2 661.0699999999999 609.1800000000001 703.0 1300.66 1067.01 973.58 True False 781.8173424761665 752.3572700584414 917.7452540485413 583.195371028622 768.6346738124216 731.0239886172485 719.8601206463577 802.6524028472063 1006.0625867272207 825.9716999293707 731.8132165589408 1.0683290828667322 1.028072810157899 1.2540703464797638 0.796918336308362 1.0503153761373962 0.9989215445637846 0.983666466193672 1.0967995448638637 1.374753234791014 1.1286646390634656 1.0 9.515331660783593 -8.5258897572754 24.96764522015101 1.180062044641166 1.026773072012585 0.18953114897002177 0.12876428843446658 125.93283778020397 1044240.6633026346 0.02702674949686694 0.030726295710154762 2.9792726017030964e-09 8.5258897572754 -0.1532889726285811 ILAT(ph)PPQEDAPSVDIANIR ddPTM_A549_PD325901_60min_R1 4 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILAT(0.944)PPQEDAPS(0.056)VDIANIR;ILAT(1)PPQEDAPSVDIANIR;ILAT(1)PPQEDAPSVDIANIR;ILAT(1)PPQEDAPSVDIANIR 246.12 1.1093999999999999e-85 44027600.0 3611.77 3507.1499999999996 3321.1000000000004 3855.87 4403.24 4223.17 3194.8599999999997 4449.72 4101.509999999999 3733.63 4730.450000000001 True False 3978.434231555457 3802.709838843995 3546.489817396672 4094.038332583863 4093.971612753349 4188.777903707551 3316.4421455944735 4360.966843862189 3929.13779808523 3497.887964614719 4148.634638793216 0.9589743561300282 0.9166171933497026 0.8548571099112984 0.9868399338667155 0.9868238515079824 1.0096762593984443 0.7994056923169265 1.051181225525017 0.9470917880655224 0.8431419657702633 1.0 12.018420892459512 -9.02556445004962 0.008856083900759077 1.9254928946649248 2.1856572397762142e-05 0.0 0.0799364496016856 2288.8490488993148 13.730562713175308 1504.4681064438064 1479.4701774884581 9.428346827854295e-10 9.02556445004962 -1.925471038092527 ILATDVSSKNT(ph)PDSK ddPTM_A549_MK2206_60min_R1 1 ILATDVSSKNTPDSK 15 1 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 ILAT(0.001)DVS(0.001)S(0.005)KNT(0.983)PDS(0.01)K 70.907 0.00047149 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ILATDVSSKNT(ph)PDSK ddPTM_A549_PD325901_60min_R1 1 ILATDVSSKNTPDSK 15 1 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 ILATDVSSKNT(0.991)PDS(0.008)K 134.29 6.5801e-10 57535000.0 19911.0 21519.0 21405.0 20531.0 25750.0 24109.0 20930.0 23077.0 25243.0 24117.0 24859.0 True False 21932.350062296504 23332.48165093707 22857.672018721434 21799.153240715903 23941.408832677465 23912.664297313484 21726.50260333547 22616.711131443713 24182.124494897103 22594.24850416703 21801.500594184607 1.006001856044111 1.070223655024959 1.0484448957985284 0.999892330646757 1.0981541719684957 1.096835706056491 0.9965599619840323 1.037392404882284 1.109195414803122 1.0363620800576399 1.0 14.412139818463666 -6.741899538647963 24.99792458057915 1.0535217860488602 1.0351683713051019 0.06585099592891841 0.0394643342996016 873.9309547880499 1118040.9968713028 0.006906227840395697 0.01435724246194058 1.811759141745476e-07 6.741899538647963 -0.01835341474375829 ILATDVSSKNT(ph)PDSKK ddPTM_A549_MK2206_60min_R1 2 ILATDVSSKNTPDSKK 16 2 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 ILAT(0.001)DVS(0.011)S(0.011)KNT(0.955)PDS(0.022)KK;ILAT(0.004)DVS(0.022)S(0.022)KNT(0.951)PDS(0.001)KK 78.021 0.0001353 24195000.0 4190.6 4921.1 5210.1 4231.4 6115.7 5347.5 5479.0 5101.1 6953.8 6755.299999999999 6889.8 True False 4897.870829666663 5171.562970282429 5948.9705236865575 5268.093189954766 5216.088631418803 5913.368900616784 6474.46337867526 5824.19654646357 5378.775402936774 5229.2730382403915 5178.872511193525 0.9457407609630263 0.9985885845045814 1.1486999362947352 1.0172278190993118 1.0071861433439113 1.1418255397937933 1.2501685192445784 1.1246070518004165 1.038599693526184 1.0097319497512116 1.0 12.33842232860435 -3.7638851536829385 16.470615366157034 1.0483131671481778 0.3446627616509905 0.0 0.08788256361775688 0.0 0.0 0.01220534311110656 0.0 0.00017223239720074408 3.7638851536829385 -0.7036504054971873 ILATDVSSKNT(ph)PDSKK ddPTM_A549_PD325901_60min_R1 2 ILATDVSSKNTPDSKK 16 2 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 ILAT(0.005)DVS(0.028)S(0.024)KNT(0.939)PDS(0.005)KK;ILAT(0.001)DVS(0.018)S(0.018)KNT(0.711)PDS(0.251)KK 89.66799999999999 3.8838e-06 26050000.0 6859.0 6270.9 7543.8 7358.6 9116.0 7900.2 7717.299999999999 8180.6 8940.6 8157.700000000001 7711.0 True False 7555.320630671071 6799.370750725465 8055.76763255458 7813.1240094068535 8475.723608492726 7835.863390502965 8010.986074568601 8017.431515443445 8564.857673774 7642.621429798205 6762.595884056373 1.11722196035455 1.0054379808138163 1.1912241646062298 1.1553439157627658 1.2533239829508749 1.15870643830381 1.184602216651073 1.1855553182388878 1.2665044341872735 1.1301313224728684 1.0 12.723361429124195 -2.160981988931293 19.485595463557782 1.1424341435640981 0.04890764737006115 0.0 0.08200994340238715 0.0 0.0 0.014005436756000331 0.0 0.006902684300716175 2.160981988931293 -1.093526496194037 ILATPPQEDAPS(ph)VDIANIR ddPTM_A549_PD325901_60min_R1 4 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILATPPQEDAPS(1)VDIANIR;ILATPPQEDAPS(1)VDIANIR;ILATPPQEDAPS(1)VDIANIR;ILAT(0.001)PPQEDAPS(0.999)VDIANIR 293.47 1.4793999999999997e-143 59255600.0 9561.51 9465.0 9633.93 10160.68 11848.29 10431.82 10790.75 10416.22 11206.9 10944.86 12641.119999999999 True False 10532.187456388361 10262.648767420387 10287.7464233273 10788.28212702144 11016.106984781525 10346.866716578901 11201.397896174969 10208.460320733491 10735.912966044545 10253.799671738507 11086.342378662004 0.950014630313039 0.9257019508231147 0.9279657863650531 0.9731146448972888 0.9936646919712978 0.9332985003686717 1.0103781313604758 0.9208140946812015 0.9683908902820885 0.9249037528801293 1.0 13.436495847615355 -14.999959481200717 0.006957997576714229 2.0418708689656535 0.0004812792214887172 0.0 0.03437607787098421 15673.754075165207 8.49778350117613 1380.3846927386783 1125.0618786175864 1.000093302335607e-15 14.999959481200717 -2.0413895897441647 ILATPPQEDAPSVDIANIR ddPTM_A549_MK2206_60min_R1 2 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 ; 262.37 3.057699999999999e-110 22567100.0 3008.5 3734.4 3579.0 3904.8 4388.4 3784.5 3041.2 3142.1000000000004 5191.8 5273.6 5009.9 False True 3516.2612492368994 3924.4650090879463 4086.5560170196673 4861.476175293134 3742.872173278326 4184.973278052213 3593.746674069575 3587.50229727768 4015.865589600961 4082.2900973257365 3765.803563794076 0.9337346437938572 1.0421321618629564 1.0851750357637961 1.2909532037287572 0.9939106248832994 1.1113095006569647 0.954310710367709 0.9526525312603518 1.0664033642676107 1.0840422311387898 1.0 11.878742031047722 -7.738735636588521 24.99928070112069 1.0197455021148876 1.0810825674797726 0.10701237691611576 0.09109819792212501 451.0530418732036 496657.04728788196 0.013740778750112391 0.02037223813809018 1.825006280725306e-08 7.738735636588521 0.061337065364885035 ILATPPQEDAPSVDIANIR ddPTM_A549_PD325901_60min_R1 3 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 ;; 214.58 6.9223e-66 24562700.0 5235.9 5131.799999999999 5329.6 6404.7 7140.1 6962.3 6121.8 7036.9 7354.599999999999 6117.1 7319.5 False True 5767.444713534143 5564.274796053665 5691.298705488331 6800.303772870934 6638.60400800778 6905.601337143204 6354.768448977498 6896.543509158747 7045.5117383104325 5730.865262049183 6419.247902133401 0.8984611283850504 0.8668110160077179 0.8865989898282102 1.0593614511461524 1.034171620915509 1.0757648625547185 0.9899552947418538 1.0743538206191912 1.0975603132524132 0.8927627269457162 1.0 12.648188561538698 -6.257743133928024 23.95042848293547 1.0469848658341878 0.8822424170213713 0.5532189681144406 0.05577320628100303 60.63179388315346 392868.4901067574 0.005504809052202545 0.013961139502924868 5.524040653711425e-07 6.257743133928024 -0.16474244881281652 ILCKS(ph)PQSDPADTPTNTK ddPTM_A549_MK2206_60min_R1 2 ILCKSPQSDPADTPTNTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ILCKS(0.998)PQS(0.002)DPADTPTNTK;ILCKS(0.717)PQS(0.282)DPADTPTNTK 147.35 1.8715000000000002e-17 31349000.0 6916.700000000001 7517.0 6491.4 6165.9 9334.2 7659.0 7837.1 7193.4 8904.3 8212.0 9375.5 True False 8084.069862920677 7899.583192297049 7411.978130450254 7676.5457767977705 7961.151544939974 8469.470296367266 9260.999624934457 8213.086478863584 6887.490267245237 6356.903496518306 7047.304599363535 1.1471151486272888 1.1209368178878611 1.0517465260575871 1.0892882049530064 1.1296732577245165 1.2018027852992434 1.3141193905214268 1.1654223771745775 0.9773226302531707 0.902033310308798 1.0 12.782855856402467 -8.761693303284382 24.999957638372216 0.9892912335015334 1.152262693260893 0.6000084115451387 0.06894282477851853 3.872329242138481 381238.6786115134 0.012165360561445142 0.013352223507117629 1.7310383788141318e-09 8.761693303284382 0.16297145975935967 ILCKS(ph)PQSDPADTPTNTK ddPTM_A549_PD325901_60min_R1 2 ILCKSPQSDPADTPTNTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ILCKS(0.752)PQS(0.248)DPADTPTNTK;ILCKS(0.506)PQS(0.493)DPADTPTNTK 142.45 3.2482e-17 64499000.0 9544.9 8967.8 10202.0 8035.5 8040.3 6728.6 7755.2 9115.8 6869.9 8315.9 9885.0 True False 10513.891221416005 9723.547978496837 10894.369069609713 8531.834585055416 7475.577065529189 6673.804512460219 8050.328379808274 8933.978217793245 6581.181993720779 7790.83265479963 8669.207666177837 1.2127857154045392 1.121618993674868 1.2566741378353583 0.9841539058225158 0.8623137607712992 0.7698286590246868 0.9286117820450804 1.0305414937340107 0.7591445778138054 0.8986787437558901 1.0 13.081684427092846 -6.437131642684401 3.914128155919284 0.8884512889213253 1.1879768941150557 0.7163742245806197 0.08338124421967065 0.11615389283008286 3.276560620560654 0.01469242793754202 0.035306976040713575 3.6548398986848377e-07 6.437131642684401 0.2995256051937304 ILCKSPQS(ph)DPADT(ph)PTNTK ddPTM_A549_PD325901_60min_R1 1 ILCKSPQSDPADTPTNTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 ILCKS(0.363)PQS(0.634)DPADT(0.633)PT(0.268)NT(0.102)K 48.685 0.009015500000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ILDAT(ph)DQESLELKPTSR ddPTM_A549_PD325901_60min_R1 2 ILDATDQESLELKPTSR 17 1 C9J519;Q8IZA0-3;Q8IZA0;E7EN73;Q8IZA0-2 C9J519 KIAA0319L Dyslexia-associated protein KIAA0319-like protein 1 ILDAT(0.98)DQES(0.02)LELKPTSR;ILDAT(0.815)DQES(0.185)LELKPTSR 52.853 0.006046899999999999 4027300.0 2889.6 3016.0 2725.4 2712.9 3528.0 3029.4 3080.7 3427.3999999999996 3406.5 3480.3 4080.3999999999996 True False 3182.950064788911 3270.168904652919 2910.362033161567 2880.469671557069 3280.205450939268 3004.7295707943704 3197.9377243237236 3359.037818256712 3263.3366514228524 3260.5532640482843 3578.5366677867514 0.8894557637039661 0.9138285305528108 0.8132827195428918 0.8049294834635795 0.9166331815087995 0.8396531458912594 0.8936439727196033 0.9386624003308607 0.9119192995278588 0.9111414990935015 1.0 11.805154047092502 -9.701958721506703 0.3614443857008955 1.0143783418383692 0.8566854204652722 0.314596016363489 0.04477452579915047 0.7320859276270744 0.2069289694439169 0.04484836436373838 0.017501425252720585 1.986283699175707e-10 9.701958721506703 -0.15769292137309698 ILDAVVAQEPLHR ddPTM_A549_PD325901_60min_R1 1 ILDAVVAQEPLHR 13 0 Q15029-3;Q15029;K7EJ74;K7EP67;Q15029-2 Q15029-3 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component 0 70.41199999999999 0.0030026999999999996 1955800.0 240.27 245.39 300.1 275.14 218.03 213.21 125.0 261.61 185.34 120.84 173.21 False True 264.6620335225747 266.0698764962799 320.4665906479002 292.1347729117226 202.71632496266673 211.47368844955028 129.7569434026246 256.39198332092514 177.55080433721162 113.21014177731662 151.90626806865575 1.742271973944865 1.7515398138543343 2.109633754566742 1.923125204943413 1.334482951493791 1.3921327351282988 0.8541908444750909 1.6878301769947102 1.1688181573716598 0.745263136384537 1.0 7.247037590391518 -6.9529310634254236 2.0959241062532734 1.129986760882581 1.8939118027278694 0.6431533291016475 0.2570321861519132 0.13589262836622065 1.2007018001483454 0.034806619077133144 0.07245440832120617 1.1144714221968174e-07 6.9529310634254236 0.7639250418452883 ILDEIEEHNIK ddPTM_A549_PD325901_60min_R1 2 ILDEIEEHNIK 11 0 Q15019;Q15019-3;Q15019-2;H7C2Y0;B5MCX3;C9J2Q4 Q15019 SEPT2 Septin-2 0 ; 104.52 0.00020661 3451200.0 951.98 1023.0 1046.75 907.86 1136.59 1095.28 903.0799999999999 887.71 941.77 975.1099999999999 951.94 False True 1048.6243087893645 1109.2118002188126 1117.788749619092 963.9364503003437 1056.7598394226357 1086.3604028189263 937.4472035843374 870.0039276549766 902.1906819933947 913.5413881866862 834.8574148448486 1.2560519798272891 1.3286242422904642 1.338897792297651 1.1546120728645424 1.2657967943172976 1.3012526253010732 1.1228830060263097 1.0420988209305893 1.0806524155517736 1.0942483973223864 1.0 9.705386010760739 -7.9376742168805885 3.0693582838523885 1.0399021250412288 1.2740930819533902 0.7994160759125059 0.05190213016915766 0.08004431937472146 1.5399158469478471 0.00873512289216796 0.01222208243930912 1.1543188377308682e-08 7.9376742168805885 0.2341909569121614 ILDLIESGK ddPTM_A549_PD325901_60min_R1 1 ILDLIESGK 9 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 133.57 6.582400000000001e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ILDLIESGKK ddPTM_A549_MK2206_60min_R1 2 ILDLIESGKK 10 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 84.65799999999999 0.00012423 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ILDQMPAT(ph)PSSPMYVD ddPTM_A549_PD325901_60min_R1 1 ILDQMPATPSSPMYVD 16 0 P45985;P45985-2 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 1 ILDQMPAT(0.291)PS(0.291)S(0.267)PMY(0.151)VD 55.173 0.005054 6003700.0 1790.1 1848.0 1730.1 1362.8 1837.8 2058.2 1965.0 1769.7 1949.9 2080.6 2034.6 True False 1971.829634198031 2003.7374455565646 1847.5149899364608 1446.9770608566391 1708.7192680658122 2041.438701594036 2039.7791502892574 1734.401945197207 1867.9524839599046 1949.2305609225823 1784.35709839205 1.1050644716659683 1.1229464367654918 1.0353953205898778 0.8109234761139257 0.957610598016284 1.1440751985315338 1.1431451429354458 0.9720038364294572 1.04684902234154 1.0923993648351589 1.0 10.801188651335499 -11.901803996527109 0.004163397597531848 7.706652729612287e-05 2.0261948728915593 0.0 0.09661325951020586 151068.60434530338 94.06074458034031 23617.38924940675 22175.134047939155 1.2537068635855222e-12 11.901803996527109 2.026117806364263 ILDQMPATPS(ph)SPMYVD ddPTM_A549_MK2206_60min_R1 2 ILDQMPATPSSPMYVD 16 0 P45985;P45985-2 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 1 ILDQMPAT(0.012)PS(0.414)S(0.414)PMY(0.16)VD;ILDQMPAT(0.007)PS(0.331)S(0.331)PMY(0.331)VD 59.542 0.00141 4298900.0 1725.2 1602.2 1612.2 1711.7 2170.0 1658.9 1554.6 1618.4 3103.2 2348.5 2743.5 True False 2016.3715829095884 1683.7451364504893 1840.8342024697151 2131.0665768411336 1850.7958745816184 1834.4436969113012 1837.0506969316584 1847.8131561421326 2400.3301547921133 1817.972218895912 2062.213233251973 0.9777706545553994 0.8164747996478207 0.8926497865435777 1.0333880815421708 0.8974803598088817 0.8895509287458627 0.89081510452474 0.8960339921920946 1.1639582736102183 0.8815636470478325 1.0 11.009977800030619 -8.745327779667019 24.99956920934595 1.07742474031318 0.9100949805958041 0.12489248893393567 0.08625812553585274 142.39668584904967 220949.7408290246 0.012865453045050608 0.01456642782524131 1.797513746479386e-09 8.745327779667019 -0.16732975971737596 ILDQMPATPSS(ph)PMYVD ddPTM_A549_MK2206_60min_R1 3 ILDQMPATPSSPMYVD 16 0 P45985;P45985-2 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 1 ILDQMPAT(0.036)PS(0.361)S(0.398)PMY(0.205)VD;ILDQMPAT(0.005)PS(0.186)S(0.794)PMY(0.015)VD;ILDQMPAT(0.089)PS(0.122)S(0.667)PMY(0.122)VD 73.435 0.00058928 14899800.0 2507.3599999999997 2399.59 2013.05 2112.04 3612.1499999999996 3102.2400000000002 2541.16 2956.2 4224.7 3749.2 3988.9700000000003 True False 2930.541068933564 2521.7188815224276 2298.5307600059923 2629.4898948130785 3080.807519986172 3430.5169776997523 3002.8558786921726 3375.250402982806 3267.8121954596036 2902.253116067512 2998.398659028657 0.9773687231713625 0.8410218814396576 0.7665861085832429 0.876964738126221 1.0274842908928632 1.1441163660375573 1.001486533370102 1.1256843358101791 1.0898524736261135 0.9679343696770822 1.0 11.549976497556663 -6.767139203336149 4.335295245978912 1.0543489945486793 0.8541257684809974 0.6340336149536558 0.06796356128734996 0.09190195205194385 4.070665742647883 0.0095034020864998 0.019357219501376016 1.7094672959430052e-07 6.767139203336149 -0.20022322606768184 ILDQMPATPSS(ph)PMYVD ddPTM_A549_PD325901_60min_R1 3 ILDQMPATPSSPMYVD 16 0 P45985;P45985-2 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 1 ILDQMPAT(0.104)PS(0.122)S(0.768)PMY(0.006)VD;ILDQMPAT(0.127)PS(0.153)S(0.715)PMY(0.005)VD;ILDQMPAT(0.125)PS(0.145)S(0.699)PMY(0.031)VD 72.175 0.00032653 19842900.0 7287.7 6682.8 6932.6 7118.099999999999 7015.0 7270.1 6722.0 7034.3 8510.199999999999 7401.0 7280.6 True False 8027.541939078819 7245.9830092886405 7403.087925110402 7557.768870621986 6522.290600436214 7210.89471599397 6977.809388419542 6893.9953681984025 8152.545889017688 6933.699596937436 6385.1323555259805 1.257224046754712 1.134821113460184 1.1594259152206041 1.183651089719566 1.021480877337105 1.1293258016418934 1.092821416987642 1.0796949827096425 1.2768013934687052 1.085913213832866 1.0 12.640500810100171 -11.140013842434925 1.5222443148948808 1.0002958314617214 1.1604421830084726 0.18907202921474275 0.07486666135840064 0.3613100392490897 1.5045815221653358 0.05758923893197263 0.012439125709515022 7.2441287021720505e-12 11.140013842434925 0.16014635154675116 ILDSVGIEADDDRLNK ddPTM_A549_PD325901_60min_R1 2 ILDSVGIEADDDRLNK 16 1 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ; 177.74 1.7676999999999999e-28 23572000.0 7652.099999999999 9027.4 8333.0 8481.0 8269.8 8317.400000000001 7470.299999999999 10530.3 8070.799999999999 9843.9 9775.4 False True 8428.93555882171 9788.170679663055 8898.527490399698 9004.852108251504 7688.957777261204 8249.665852025179 7754.58635440501 10320.264905639455 7731.612342963025 9222.354474029518 8573.087771366185 0.9831854967091392 1.1417322370540992 1.0379606190572865 1.0503627570835559 0.8968714636215501 0.9622747453465688 0.9045266491152766 1.2037978824979234 0.9018468665148095 1.0757331220650583 1.0 13.065599198464689 -6.634144524626598 8.686587684591254 0.9655460929093924 1.059862691092767 0.04470280186089348 0.0932593795402621 0.3191147101546037 23.246428030925006 0.012277573449365323 0.0255929988472801 2.3219639640223308e-07 6.634144524626598 0.09431659818337468 ILDWHVANTDKK ddPTM_A549_MK2206_60min_R1 2 ILDWHVANTDKK 12 1 P37837;F2Z393 P37837 TALDO1 Transaldolase 0 ; 66.262 0.0017043 3323400.0 2033.5900000000001 2208.0 2058.37 1976.28 3309.5 2717.8999999999996 2558.5 2304.4 3423.2 3076.2 3029.5 False True 2376.810275497977 2320.377768869479 2350.277817477723 2460.4686887185794 2822.6769340681394 3005.5063740039955 3023.346332239577 2631.0557569290245 2647.8506657271105 2381.2842834863127 2277.191540053525 1.043746313690464 1.0189646887652406 1.0320949187359445 1.080483852781548 1.2395430443245863 1.3198302914533715 1.327664484546835 1.1553950164715534 1.1627702892594065 1.0457110179806575 1.0 11.153039929787687 -6.525250300174976 24.836199479115006 1.1329644508487184 1.0346634167382371 0.2311253161970762 0.10054655790519561 121.29844366281326 1270308.765517994 0.01830756276905926 0.03830294384337553 2.9836625268314584e-07 6.525250300174976 -0.0983010341104813 ILDWHVANTDKK ddPTM_A549_PD325901_60min_R1 1 ILDWHVANTDKK 12 1 P37837;F2Z393 P37837 TALDO1 Transaldolase 0 72.089 0.0006688 3530400.0 1626.5 1707.7 1779.2 2007.2 1938.7 2048.5 1660.2 1684.1 2517.6 2142.5 2138.2 False True 1791.6210826339848 1851.6138721736704 1899.947211198746 2131.180185318055 1802.5324001519152 2031.8176951780092 1723.3798194963 1650.5093043491083 2411.794027189833 2007.222184358662 1875.2149551665584 0.9554217118937446 0.9874141986080781 1.0131890245243862 1.1364991407765097 0.9612404141645791 1.0835118873065628 0.9190305435374622 0.8801707237891074 1.286142700891384 1.070395785202331 1.0 10.872840265325518 -8.75265905093377 24.99999051153079 1.1351229463720196 0.9970106207501823 0.2634383846783106 0.0930736829958486 213.77087425452686 608663.2827993189 0.020228719477395615 0.022765469877747167 1.7674248181908607e-09 8.75265905093377 -0.13811232562183728 ILEAKS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 ILEAKSPLR 9 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 ILEAKS(1)PLR 42.031000000000006 0.022943 1111100.0 1344.6 1133.1 1310.1 1508.7 1566.4 1300.1 1245.5 1363.3 1858.7 1607.0 1676.4 True False 1571.5356076861997 1190.7699501385912 1495.8918798260588 1878.331567728117 1335.9846349975332 1437.675719063466 1471.7912279868651 1556.5519499311488 1437.707417733986 1243.9775838900289 1260.1036137137248 1.247147925442921 0.9449778075226716 1.1871181572263163 1.4906167614204173 1.0602180808450943 1.1409186541624208 1.1679922285511612 1.2352571113924067 1.1409438097688132 0.987202616000624 1.0 10.299326650804002 -10.134811416409947 0.6470142597381883 0.9987069472421335 1.1820395547874147 0.24007889041252894 0.1270037510043942 0.9042419265396653 0.7220738596139994 0.08237767449742547 0.02800159191261959 7.33142816461469e-11 10.134811416409947 0.18333260754528125 ILEAKS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 ILEAKSPLR 9 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 ILEAKS(1)PLR 53.568999999999996 0.0060183 2543400.0 1072.5 752.9 788.2 1001.1 914.89 680.96 906.5 818.92 1020.5 1003.9 916.04 True False 1181.3794104672302 816.3495253027801 841.6919918316389 1062.935673336939 850.6312825991567 675.4144875315687 940.9973535558339 802.5859981696882 977.6119338843442 940.513582673354 803.3728872559984 1.4705243719418406 1.0161526960302392 1.0476977816696345 1.3230912944641482 1.0588249816403117 0.840723527325543 1.1713083282781747 0.9990205182440275 1.2168843999994534 1.1707061535095782 1.0 9.649925962981163 -5.254475074089881 24.22967172625114 1.0892975460310679 1.470524647738319 0.4428129051395898 0.1243943115825865 391.1981667014156 1360971.3758475222 0.01729364786807439 0.2339833156313023 5.56576577513842e-06 5.254475074089881 0.38122710170725105 ILEDHGS(ph)PAGEIDDEDKDKDETETVK ddPTM_A549_MK2206_60min_R1 4 ILEDHGSPAGEIDDEDKDKDETETVK 26 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK 297.02 4.756899999999998e-171 442044000.0 25534.0 25136.5 25155.5 22118.0 35841.8 28645.2 26077.3 27687.6 34748.9 36671.3 36314.4 True False 29843.51495363636 26415.840483327753 28722.928160418618 27536.91099291476 30569.518699345343 31676.41605085514 30815.207859961363 31612.402089718813 26878.329632590772 28387.227860676034 27296.53225354672 1.0933079219159314 0.9677361299216117 1.052255572012689 1.00880620062414 1.119904844153724 1.1604556856023105 1.128905590414601 1.1581105539738044 0.9846792765809433 1.0399572955640766 1.0 14.736430062621993 -8.79387678436085 24.995785300592107 0.9927651851166058 1.083550402474582 0.2510525676083105 0.0582092047360166 165.97936367093968 127900.49517797174 0.010599194251260345 0.011284109654777554 1.6073972302178673e-09 8.79387678436085 0.09078521735797607 ILEDHGS(ph)PAGEIDDEDKDKDETETVK ddPTM_A549_PD325901_60min_R1 4 ILEDHGSPAGEIDDEDKDKDETETVK 26 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK 331.23 1.1456999999999994e-232 913350000.0 31747.4 31373.1 30643.300000000003 32046.899999999998 37871.8 31380.100000000002 33586.1 34564.6 33689.899999999994 33701.299999999996 34581.2 True False 34970.37267679937 34017.02124090404 32722.938611132256 34026.364229209415 35211.81541861725 31124.55086963898 34864.23741451912 33875.181937595866 32274.030662783123 31573.39416650015 30327.931628288192 1.1530747663708452 1.1216400003083253 1.0789703370542465 1.1219480657715388 1.1610358348926653 1.026266850344906 1.1495751784800161 1.1169631464744862 1.0641685380443062 1.0410665176074936 1.0 14.8883594887425 -9.533901860597046 0.5209685835869688 0.9990083578415243 1.1207505834262443 0.47080984715646546 0.03829661955839692 0.4088643116496769 0.24777371401085913 0.020312770856958547 0.01042206552501181 2.9248132358725106e-10 9.533901860597046 0.12174222558472003 ILEDSGFDEQQEFRS(ph)R ddPTM_A549_MK2206_60min_R1 2 ILEDSGFDEQQEFRSR 16 1 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 ILEDSGFDEQQEFRS(1)R;ILEDSGFDEQQEFRS(1)R 78.021 0.00010921 12967300.0 581.4300000000001 540.11 483.87 729.0699999999999 1216.46 1757.22 1190.27 1334.59 1669.48 1871.43 2411.6 True False 679.5611694013002 567.5992920036666 552.4900418986609 907.6921827291962 1037.5203454348184 1943.167854051767 1406.5266518955657 1523.7722195104595 1291.3454456117363 1448.672663235417 1812.7331632259727 0.37488207486199504 0.3131179500205958 0.30478288426932054 0.5007312720609418 0.5723513898694436 1.0719547109700749 0.7759148894217202 0.8405937787328428 0.712374811587622 0.7991648702765127 1.0 10.82395085871115 -6.880051868866563 2.153203354150988 0.8642359471244184 0.34394884415031163 0.8209367495414381 0.10783274241047529 0.10842887773154558 1.0199894860906586 0.019102838291943494 0.04091467992759821 1.318099305287755e-07 6.880051868866563 -0.5202871029741067 down ILEDSGFDEQQEFRS(ph)R ddPTM_A549_PD325901_60min_R1 2 ILEDSGFDEQQEFRSR 16 1 A0A3B3IRT3;O60343-2;O60343-3;O60343 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 ILEDS(0.001)GFDEQQEFRS(0.999)R;ILEDSGFDEQQEFRS(1)R 161.22 4.999899999999999e-21 24629000.0 2009.12 2125.84 1732.73 2566.96 2436.6 1877.62 2299.91 2241.1099999999997 2444.8900000000003 2338.36 2732.2 True False 2213.084383364028 2304.9919974361296 1850.3234775519345 2725.515289210857 2265.4616218136666 1862.329285242926 2387.4343336090424 2196.4093029332153 2342.139775633998 2190.7155505329865 2396.156720842799 0.9235975110115588 0.961953772633618 0.7722046982390706 1.137452849182675 0.945456364397082 0.7772151416656461 0.9963598427607486 0.9166384167729534 0.9774568396386853 0.914262214769678 1.0 11.226506555471795 -8.915351333031621 1.61208965721449 0.9925094869495285 0.9283055554873 0.0004625036033391039 0.09711038502141617 0.670146318628301 3.469819720716131 0.018023923674670428 0.018286093039365986 1.215202535400519e-09 8.915351333031621 -0.06420393146222847 ILEGDNGMDS(ph)DMEEEADDGSK ddPTM_A549_MK2206_60min_R1 2 ILEGDNGMDSDMEEEADDGSK 21 0 Q9H8G2;A0A3B3ISJ3;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 ILEGDNGMDS(1)DMEEEADDGSK;ILEGDNGMDS(1)DMEEEADDGSK 89.48299999999999 6.790000000000001e-07 7295700.0 1644.83 1984.52 1872.67 1823.17 2281.4 1961.2200000000003 1956.53 1545.47 2564.8 2941.4 2590.8999999999996 True False 1922.4370917674362 2085.523591429738 2138.2427651277517 2269.8467318452117 1945.8090821523053 2168.7549986475274 2312.0061752654697 1764.5451053033742 1983.876895143985 2276.93569710898 1947.5080247977169 0.9871266599618327 1.070867778142458 1.097937845647566 1.1655134166037522 0.9991276325315332 1.1136051667221196 1.1871613086193122 0.9060528032928918 1.0186745676439746 1.1691534351163868 1.0 10.927413557653534 -8.262618427533873 24.999563161524463 1.001357517419211 1.0888873542546056 0.10928955310113675 0.08118393725306913 96.9102966583826 2054796.4789865348 0.00994207645592073 0.012352009437022015 5.462375763335962e-09 8.262618427533873 0.0875298368353945 ILEGPQQSLS(ph)GSPLQPIPAS(ph)PPPQIPPGLRPR ddPTM_A549_PD325901_60min_R1 1 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 2 ILEGPQQS(0.319)LS(0.364)GS(0.319)PLQPIPAS(0.999)PPPQIPPGLRPR 79.941 3.1278e-06 7094500.0 1470.6 1280.4 1368.4 1504.6 1676.3 1863.2 1925.2 1620.9 1908.8 2049.8 1655.9 True False 1619.8942294014992 1388.3038015641914 1461.2678528576691 1597.5357248054727 1558.5624709210574 1848.0267169419922 1998.4645395098623 1588.5698779285483 1828.5797740308055 1920.3752781789442 1452.2347976149597 1.1154492593497212 0.9559775071112717 1.0062201065953966 1.100053329825965 1.0732165855553952 1.2725398950479985 1.3761304596143744 1.0938795025002122 1.2591488490937734 1.3223586718434395 1.0 10.504059012079328 -6.661058775261808 2.134668192277301 1.1524442265385753 1.022550557888054 0.2527604337175784 0.11679591407624938 0.45806288104558823 4.224820262102986 0.01927974135577365 0.04636740082718965 2.1824345319874872e-07 6.661058775261808 -0.1298936686505212 ILEGPQQSLS(ph)GSPLQPIPASPPPQIPPGLRPR ddPTM_A549_MK2206_60min_R1 1 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQS(0.013)LS(0.565)GS(0.422)PLQPIPASPPPQIPPGLRPR 134.73 1.7981e-30 28530000.0 1339.7 1620.3 1690.5 1780.3 2131.4 1884.9 1521.4 1409.9 2523.2 2291.5 2761.4 True False 1565.8086074796988 1702.7663491391402 1930.2383198579912 2216.4735799207037 1817.8738834485061 2084.3588669046417 1797.8186866794192 1609.7576426376627 1951.6992287224348 1773.8485584841317 2075.668169237104 0.7543636457339903 0.820346129682655 0.9299358868944045 1.0678361853645189 0.8758017829587144 1.0041869397991163 0.8661397391569549 0.77553708559751 0.9402751642329068 0.8545915887586676 1.0 11.019360107519438 -2.0000000024432953 0.02119879535401217 1.6042301844468518 1.47204558459851e-06 0.0 0.09682141256768091 2692.282073840052 4.276202317128164 116.93413512432107 222.65607774708366 0.009999999943741046 2.0000000024432953 -1.6042287124012673 ILEGPQQSLS(ph)GSPLQPIPASPPPQIPPGLRPR ddPTM_A549_PD325901_60min_R1 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQS(0.014)LS(0.674)GS(0.312)PLQPIPASPPPQIPPGLRPR;ILEGPQQS(0.016)LS(0.66)GS(0.324)PLQPIPASPPPQIPPGLRPR 144.29 1.7958e-40 43304000.0 4783.6 4738.0 5759.9 4704.6 6056.0 5030.0 5391.1 5485.1 6017.6 4347.6 4534.5 True False 5269.227550499806 5137.2878880124445 6150.80145109243 4995.192457078181 5630.647452065818 4989.037347691187 5596.261260623114 5375.695377522291 5764.701198767693 4073.09179403394 3976.7852465638225 1.324996755872782 1.291819288570175 1.5466767928710976 1.2560880579091673 1.415879184557685 1.254540297845354 1.4072324537661707 1.3517690909176474 1.4495882581913961 1.0242171858672358 1.0 11.957386940825138 -10.813221491651023 0.9511854111901115 0.9896657156228342 1.3701315370759148 0.7256764478897545 0.08379079313662008 0.23358704391085675 0.358270269938195 0.06307502981897531 0.014049560097085488 1.537370376252606e-11 10.813221491651023 0.3804658214530806 ILEGPQQSLSGS(ph)PLQPIPAS(ph)PPPQIPPGLRPR ddPTM_A549_MK2206_60min_R1 1 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 2 ILEGPQQS(0.012)LS(0.203)GS(0.784)PLQPIPAS(1)PPPQIPPGLRPR 87.686 1.961e-09 4443200.0 1668.7 2151.9 1790.3 1739.9 3254.8 2034.8 1901.7 2192.7 3276.4 2848.4 2999.2 True False 1950.3357642019648 2261.422518491955 2044.1914605393454 2166.17557810708 2776.0232316074885 2250.121185409077 2247.2142739964856 2503.521939862119 2534.30063133568 2204.944461700285 2254.415866290983 0.8651180083338847 1.0031079679245247 0.9067499440121028 0.9608589127217784 1.231371404502518 0.9980949917244099 0.9968055617412125 1.1104969483651528 1.1241495720597325 0.9780557769618213 1.0 11.138537954961473 -6.545887489064537 24.97713704795269 1.0656042103075745 0.9329703010566914 0.3999078475551501 0.07651013140258035 170.1423131528204 184697.40322495572 0.010703831232373331 0.02228280758256328 2.845198106078654e-07 6.545887489064537 -0.13263390925088303 ILEGPQQSLSGS(ph)PLQPIPASPPPQIPPGLRPR ddPTM_A549_MK2206_60min_R1 1 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQS(0.002)LS(0.103)GS(0.895)PLQPIPASPPPQIPPGLRPR 179.85 6.755399999999998e-64 22955000.0 1447.5 1991.1 1458.6 1830.2 1911.7 1081.3 1418.6 2251.1 2529.3 913.52 1237.7 True False 1691.80261202274 2092.4384853242855 1665.4514128038245 2278.5990821607998 1630.4914624136766 1195.7224482911506 1676.3412573441724 2570.2003187046203 1956.4175884621334 707.1551975328057 930.344931217775 1.8184681350477776 2.249099678100453 1.790144017470845 2.449198147592665 1.7525666101920336 1.285246372789939 1.8018491863549206 2.7626316137825966 2.10289487566862 0.7601000164607495 1.0 9.86162189341056 -10.651950958838306 0.9423001665403962 1.004634591102644 2.0008987556123787 0.5447447686058429 0.3876293369550605 0.3894221221230306 0.6207739655822445 0.25721946406393487 0.07031054221335693 2.2286868016020268e-11 10.651950958838306 0.9962641645097348 ILEGPQQSLSGS(ph)PLQPIPASPPPQIPPGLRPR ddPTM_A549_PD325901_60min_R1 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQS(0.025)LS(0.248)GS(0.727)PLQPIPASPPPQIPPGLRPR;ILEGPQQS(0.287)LS(0.246)GS(0.467)PLQPIPASPPPQIPPGLRPR 109.55 4.2544e-15 48382000.0 5223.9 5135.9 5716.6 4966.6 6589.2 6174.4 5923.3 5624.5 6288.5 5984.5 6625.0 True False 5754.226482368078 5568.720317442615 6104.56285270838 5273.375602033006 6126.397323505954 6124.117733515794 6148.714422854127 5512.314935165108 6024.2162138478225 5606.637648678842 5810.166999335167 0.9903719605695516 0.9584441063535386 1.0506690863458656 0.9076117093770998 1.0544270628033534 1.0540347178001166 1.0582681054705827 0.948736057981786 1.0368404582066484 0.9649701375744253 1.0 12.50436391570156 -6.836565932491739 24.99999972247682 1.0205876987321354 0.980713235497548 0.1426779164295061 0.0461762201914402 50.59628522504097 16835.383197777737 0.0059343401551863175 0.011214851673563246 1.456914506212943e-07 6.836565932491739 -0.03987446323458743 ILEGPQQSLSGSPLQPIPAS(ph)PPPQIPPGLRPR ddPTM_A549_MK2206_60min_R1 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQSLSGS(0.002)PLQPIPAS(0.997)PPPQIPPGLRPR;ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR 166.27 4.588699999999999e-52 79442000.0 3816.6 4924.08 4751.37 5281.43 6389.700000000001 4266.67 3947.32 5064.89 7200.4 5937.39 6584.599999999999 True False 4460.748773088763 5174.694639553819 5425.185711815237 6575.380587092406 5449.783594384405 4718.1661874136735 4664.496949062315 5782.853668075094 5569.520896676053 4596.129475303556 4949.462094285014 0.901259306185908 1.0455064693856073 1.0961162260601056 1.3285040802079862 1.1010860353243428 0.9532684759545061 0.9424250272465489 1.16838023161191 1.1252780182127267 0.9286119153454191 1.0 12.273056026808781 ILEGPQQSLSGSPLQPIPAS(ph)PPPQIPPGLRPR ddPTM_A549_PD325901_60min_R1 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQSLSGS(0.003)PLQPIPAS(0.997)PPPQIPPGLRPR;ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR 178.77 1.3803999999999998e-63 95165000.0 1864.87 2651.7 2605.7 3368.7 3861.7 3283.7 2719.7 3668.1 4473.200000000001 0.0 0.0 True False 2054.190229555266 2875.168065141958 2782.5384713469953 3576.7769481272057 3590.4675141417683 3256.9586359072655 2823.199671776946 3594.9368679312192 4285.206959972025 0.0 0.0 0.0 ILELDQFK ddPTM_A549_MK2206_60min_R1 1 ILELDQFK 8 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 137.0 0.0030103 1316800.0 2304.1 2410.5 2381.0 2257.0 2881.3 2584.3 2245.3 2638.2 3444.4 3426.0 3311.9 False True 2692.97575016345 2533.184153922049 2718.6616028286758 2809.96510132058 2457.4645868350294 2857.7689106804955 2653.241946366046 3012.1729291486504 2664.2488995765534 2652.064220539664 2489.463826210025 1.0817492995121172 1.0175621462146667 1.0920671247380938 1.1287430938888106 0.9871461320152173 1.1479455457809082 1.0657885117396373 1.2099685472170127 1.0702099269434342 1.0653154276104435 1.0 11.281619336769577 -10.040750345546027 1.0886444499536436 1.0092355885581876 1.0879925473170287 0.08968492830556274 0.05996465258559414 0.46034325286980954 1.097453987868525 0.01937495855547015 0.01044912804517543 9.10436487215625e-11 10.040750345546027 0.07875695875884103 ILELDQFK ddPTM_A549_PD325901_60min_R1 1 ILELDQFK 8 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 137.0 0.0030103 3637800.0 3228.6 3360.0 3261.2 3775.4 3646.7 3768.9 3862.5 3556.9 3934.8 3881.9 4003.9 False True 3556.3650952303005 3643.1589919210273 3482.524643188709 4008.5978834444927 3390.5683724320347 3738.2073279748124 4009.489551141102 3485.9548391659305 3769.4340396355874 3636.7961715108036 3511.4456828132975 1.012792284567254 1.037509709961455 0.9917637798681774 1.1415804900712254 0.9655761981531156 1.0645778592764215 1.1418344218637555 0.9927406413341002 1.0734706955841604 1.0356976869416012 1.0 11.777849403517642 ILELT(ph)PEPDRPR ddPTM_A549_MK2206_60min_R1 4 ILELTPEPDRPR 12 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61 Q14004 CDK13 Cyclin-dependent kinase 13 1 ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR 128.95 3.2938e-08 356638000.0 2798.44 2934.92 2750.63 2142.5299999999997 4036.05 3213.98 2869.02 2979.0 4821.389999999999 3744.08 4517.27 True False 3270.7482567108204 3084.2948919431224 3140.710694913331 2667.4499461818264 3442.3523915231035 3554.081230332739 3390.2837968035956 3401.2823728048766 3729.352863177735 2898.289727623509 3395.507188690407 0.9632576445736508 0.9083458583790205 0.92496069670365 0.785582181968703 1.0137962313814932 1.0467011355977989 0.99846167550338 1.0017008310669184 1.0983198255622268 0.8535660702698535 1.0 11.729411371343325 -6.94416908093275 11.688035698373163 1.039421828134831 0.8985674027769636 0.24335936185526286 0.0741387549190408 0.35977135865761967 74.22298704029316 0.007754078051403678 0.01465823294731914 1.1371844672933594e-07 6.94416908093275 -0.14085442535786752 ILELT(ph)PEPDRPR ddPTM_A549_PD325901_60min_R1 6 ILELTPEPDRPR 12 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61 Q14004 CDK13 Cyclin-dependent kinase 13 1 ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR 154.72 4.0133e-14 638379600.0 9406.13 9720.32 8967.29 9812.06 11364.85 9692.75 10054.72 9929.320000000002 10556.59 10111.689999999999 11937.429999999998 True False 10361.03339317307 10539.485479866002 9575.864224095321 10418.128661394912 10566.622142604065 9613.815457621024 10437.357871753895 9731.271923199145 10112.933233830603 9473.236167728186 10469.201787603559 0.9896679425399394 1.0067133764052256 0.9146699450796691 0.9951215835509903 1.0093054233719958 0.9182949810944148 0.9969583243789063 0.9295142190039563 0.9659698455526181 0.9048670911038622 1.0 13.353863829366867 -10.626682614845835 1.0389957710041402 0.9990158590125832 0.9693159652340547 0.0 0.043392782166560194 0.8843474374575159 1.780207881382311 0.017749330020178984 0.005482677582985983 2.362203916095933e-11 10.626682614845835 -0.02969989377852844 ILENEKDLEEAEEYKEAR ddPTM_A549_MK2206_60min_R1 2 ILENEKDLEEAEEYKEAR 18 2 E5RIW3;E5RJD8;E5RHG6;O75347 E5RIW3 TBCA Tubulin-specific chaperone A 0 ; 120.11 1.0889e-10 10242600.0 2723.7 3557.6000000000004 3514.2 2653.6000000000004 4180.3 3612.9 3375.2 3686.7 4947.0 5125.5 5039.4 False True 3183.3939719283844 3738.6666442618025 4012.566402629369 3303.7321191246306 3565.3834076099242 3995.214679951075 3988.4301507035484 4209.30101504523 3826.5123987356906 3967.645990185654 3787.9778996354953 0.8403940192562137 0.986982169199446 1.0592898134425455 0.872162458878796 0.9412365916794312 1.054709078512713 1.0529180096555848 1.111226392173586 1.0101728415849267 1.0474311348457042 1.0 11.887212198314403 -7.24638824948314 23.883889107643483 1.020912832790627 0.9454794125749969 0.38505863649709615 0.062297363350712974 501.8553358316398 796368.0688502615 0.009261289452212792 0.01599501776520943 5.670374600388631e-08 7.24638824948314 -0.07543342021563004 ILENEKDLEEAEEYKEAR ddPTM_A549_PD325901_60min_R1 2 ILENEKDLEEAEEYKEAR 18 2 E5RIW3;E5RJD8;E5RHG6;O75347 E5RIW3 TBCA Tubulin-specific chaperone A 0 ; 96.48700000000001 7.433700000000001e-07 15441700.0 3871.3 4056.8999999999996 3911.7 3980.3999999999996 4960.8 3453.3 4585.1 5297.8 4241.4 4412.4 4661.4 False True 4264.311526099569 4398.789200691786 4177.171484962981 4226.2602678557105 4612.370521830929 3425.1774697379674 4759.5884895629915 5192.131222956297 4063.1487078658106 4133.800310975104 4088.0773510492027 1.0431093054061553 1.0760043959449153 1.0217936517005757 1.0338014437938763 1.1282493274368124 0.8378455629903621 1.1642608690712386 1.2700667764086557 0.9939021106885382 1.0111844654588462 1.0 11.997206778618478 ILENSEDS(ph)SPECLF ddPTM_A549_PD325901_60min_R1 1 ILENSEDSSPECLF 14 0 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 A0A087WSW7 HELLS Lymphoid-specific helicase 1 ILENS(0.002)EDS(0.884)S(0.114)PECLF 68.809 0.0013992000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ILEPDDFLDDLDDEDYEEDT(ph)PKRR ddPTM_A549_PD325901_60min_R1 4 ILEPDDFLDDLDDEDYEEDTPKRR 24 2 J3KMZ8;Q92785 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR 334.94 1.3200999999999996e-218 561958000.0 39896.7 40281.5 42042.6 41821.6 47396.2 47510.600000000006 48312.0 46463.1 46548.0 46091.6 50641.9 True False 43946.98361360179 43676.16337293652 44895.86365869176 44404.82524825504 44067.254420013516 47123.68942568925 50150.53959734077 45536.35702090316 44591.74943503036 43181.368509958345 44413.267345453816 0.9895012513214758 0.9834035184400198 1.010866039408545 0.9998099194744419 0.9922092440813023 1.0610273065287747 1.129179242933457 1.025287256321715 1.0040186660483292 0.9722628189924971 1.0 15.438703089329811 ILEQQNSSRT(ph)LEK ddPTM_A549_MK2206_60min_R1 2 ILEQQNSSRTLEK 13 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;Q5JXL7 G3V1Q4 SEPT7;DKFZp586I031 Septin-7 1 ILEQQNS(0.008)S(0.178)RT(0.814)LEK;ILEQQNS(0.084)S(0.216)RT(0.699)LEK 145.69 7.0077e-13 875980000.0 11077.3 11165.8 11487.3 10764.6 11872.1 10450.4 11275.7 10254.6 16170.8 15974.7 15022.2 True False 12946.877426016912 11734.091527012166 13116.371873235554 13401.927483241263 10125.729816875773 11556.25439158591 13324.348734975107 11708.220953395406 12508.139619461304 12366.004175089007 11291.77314837171 1.1465761183737444 1.0391717379395138 1.1615865551750792 1.186875374411311 0.8967351437037963 1.023422472249395 1.180004996548881 1.0368806386341323 1.107721476078803 1.095133953950554 1.0 13.462984430009502 -10.86542291205989 0.9551982466807281 0.9965581333279441 1.0858658855963192 0.0 0.08617049906593058 1.0531222350136336 1.5935924526232481 0.06826523405935343 0.014153248951368979 1.3632549645912095e-11 10.86542291205989 0.08930775226837517 ILEQQNSSRT(ph)LEK ddPTM_A549_PD325901_60min_R1 2 ILEQQNSSRTLEK 13 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;Q5JXL7 G3V1Q4 SEPT7;DKFZp586I031 Septin-7 1 ILEQQNSS(0.162)RT(0.838)LEK;ILEQQNS(0.016)S(0.178)RT(0.806)LEK 191.36 4.2561e-26 1460350000.0 19389.5 21129.3 23521.0 21665.0 24484.0 24332.0 26070.0 26547.0 27726.0 27058.0 28066.0 True False 21357.90776620451 22909.94026428479 25117.276503263114 23003.19784521505 22764.328305214578 24133.848259248887 27062.108116051375 26017.499259281365 26560.772639762217 25349.553262252837 24614.059925032594 0.8677116993805413 0.9307664129388623 1.020444273710358 0.934555206060123 0.9248506087394046 0.9804903511551408 1.0994573101095406 1.0570177913974064 1.0790894602783432 1.0298810248882284 1.0 14.58719501989849 -7.552810983230776 6.561793840657877 1.044309568786206 0.9411250414307465 0.6458752138233695 0.04122545067280222 0.10666780737807628 14.786252502913248 0.007167601699868363 0.010747775492526337 2.8001997775571382e-08 7.552810983230776 -0.10318452735545958 ILESITVS(ph)SLMATPQDPKGQGVGTGR ddPTM_A549_MK2206_60min_R1 1 ILESITVSSLMATPQDPKGQGVGTGR 26 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 ILES(0.004)IT(0.066)VS(0.326)S(0.3)LMAT(0.3)PQDPKGQGVGT(0.004)GR 43.162 0.012674 1814300.0 902.46 1083.3 1201.5 1004.5 1434.8 1378.0 913.01 653.49 1438.1 1299.3 1495.2 True False 1054.773184971358 1138.4353428515894 1371.8907668200986 1250.602545093718 1223.7428206680677 1523.8190453576306 1078.8920988071366 746.1242087291905 1112.3726461738013 1005.7872275969597 1123.9005745793136 0.9384933230113967 1.0129324324597986 1.2206513617395471 1.112734145154993 1.088835479175839 1.3558308268754202 0.9599533296893062 0.6638702974313112 0.989742928630651 0.8949076549528727 1.0 10.13429869841854 ILESITVSS(ph)LMATPQDPKGQGVGTGR ddPTM_A549_PD325901_60min_R1 1 ILESITVSSLMATPQDPKGQGVGTGR 26 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 ILESIT(0.007)VS(0.153)S(0.702)LMAT(0.137)PQDPKGQGVGTGR 73.107 4.0784e-06 2852100.0 1300.9 1140.3 1741.6 1650.7 1662.4 1862.3 1734.4 1578.6 2065.0 1910.7 1605.3 True False 1432.966410328037 1236.3970828831982 1859.7954490915772 1752.6599899882979 1545.6387589686615 1847.1340462435971 1800.4035411000966 1547.1135846122565 1978.2152312309374 1790.0580759178988 1407.858276835131 1.017834276294734 0.878211325121888 1.3210104168101366 1.2449122321660686 1.0978653067574824 1.312017037962059 1.278824417715829 1.0989128735956093 1.4051238422080172 1.2714760465392538 1.0 10.45928639591143 -5.755357616139695 24.999930289953063 1.206423133071903 0.9480227449318943 0.44936479047079303 0.11693769945649234 132.28365002726048 543753.5357830696 0.02080223796996872 0.07657156124591767 1.7564766623607391e-06 5.755357616139695 -0.25840038814000876 ILESITVSSLMAT(ph)PQDPKGQGVGTGR ddPTM_A549_PD325901_60min_R1 1 ILESITVSSLMATPQDPKGQGVGTGR 26 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 ILES(0.011)IT(0.162)VS(0.246)S(0.221)LMAT(0.36)PQDPKGQGVGT(0.001)GR 56.131 0.001091 3570800.0 1839.2 1347.0 2089.3 1655.8 2157.6 2187.5 2056.6 2692.6 1741.3 1930.4 1817.7 True False 2025.9142300525216 1460.5164172969103 2231.092461981532 1758.0750054053576 2006.057619315917 2169.6857252633145 2134.8650384147004 2638.8939806961616 1668.119216533866 1808.514214555875 1594.1344233496654 1.2708553308795512 0.9161814687045079 1.3995635683554604 1.1028398732593785 1.2583992854885477 1.36104314258786 1.339200137168375 1.65537732705828 1.0464106364560777 1.134480372587241 1.0 10.63855757253701 -8.96175578255098 24.99998333580549 1.020474846226006 1.2809186887289228 0.24050544091355675 0.17655354916291385 135.71028539553916 88713.3538304126 0.029777427137152264 0.03163682340217532 1.092054260282157e-09 8.96175578255098 0.26044384250291674 ILEVHIDK ddPTM_A549_PD325901_60min_R1 1 ILEVHIDK 8 0 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 69.954 0.02072 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ILEVHVDK ddPTM_A549_PD325901_60min_R1 2 ILEVHVDK 8 0 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ; 72.547 0.0060235 2942800.0 1617.48 1799.97 1468.69 1481.6999999999998 2006.46 1855.77 2052.91 1616.38 2505.6 1782.23 1709.3600000000001 False True 1781.685378874157 1951.6597888952651 1568.3641353504313 1573.221243815145 1865.5331715112236 1840.6572243985836 2131.0346134454553 1584.14003287442 2400.2983454587084 1669.6996936427252 1499.1195565258217 1.1884878501639828 1.3018706749568367 1.0461901644356388 1.049430138488122 1.2444192081881433 1.227825503567086 1.4215241233888534 1.0567136063154505 1.601138705055219 1.1137868800219106 1.0 10.549899729141217 -6.976075708591211 18.86896301963471 1.2777834827441825 1.1499891769213557 0.033242018643929505 0.17217398800188785 35.50392836742536 27997.56320969476 0.03281496564820303 0.062000944700210406 1.0566332950580015e-07 6.976075708591211 -0.1277943058228268 ILEVVKDK ddPTM_A549_PD325901_60min_R1 2 ILEVVKDK 8 1 H3BRM5;H3BV69;P20674 H3BRM5 COX5A Cytochrome c oxidase subunit 5A, mitochondrial 0 ; 104.17 0.005188 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ILFRPVASQLPR ddPTM_A549_PD325901_60min_R1 2 ILFRPVASQLPR 12 1 P35232;C9JZ20;E7ESE2;E9PCW0;C9JW96;D6RBK0;P35232-2 P35232 PHB Prohibitin 0 ; 75.479 0.0012511 4945200.0 1891.7399999999998 2488.5 1964.97 1802.1 1919.56 2122.64 1666.1 1704.4299999999998 2617.1 1981.35 2462.4 False True 2083.788052174617 2698.2146283915104 2098.3246805245058 1913.41162413395 1784.7367277225 2105.3539235990484 1729.504347224902 1670.4338065505322 2507.1123882104043 1856.2472228606925 2159.5404104396857 0.9649220001168464 1.2494392859461008 0.9716533528989548 0.8860272375011388 0.8264428482535897 0.9749083246700603 0.8008668598485602 0.7735135672735243 1.1609471978808457 0.8595566046771765 1.0 11.076508597917123 -8.782616534193275 24.999663218178792 1.07600283291479 0.9350885559961054 0.0 0.1416791848939655 305.3326021037422 360443.98946744803 0.024260900408923605 0.025840029590974988 1.649618300020574e-09 8.782616534193275 -0.14091427691868452 ILGADTSVDLEETGR ddPTM_A549_PD325901_60min_R1 2 ILGADTSVDLEETGR 15 0 P25705-2;P25705;P25705-3;K7EK77;K7EJP1;K7ERX7;K7EQH4;K7ESA0 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ; 177.1 3.3787e-27 7543500.0 6237.2 5309.9 5180.3 6404.5 7075.299999999999 6781.1 6289.799999999999 5966.7 6463.2 6943.4 7050.799999999999 False True 6870.39595241604 5757.383908095668 5531.866309674499 6800.091419325167 6578.355336459914 6725.876969866544 6529.161780910629 5847.6894877144 6191.574180383433 6504.992539031946 6183.596298703757 1.1110679967669064 0.9310737037122823 0.8946034059232039 1.099698474939356 1.0638397170007539 1.0876966485144677 1.0558842242465458 0.9456777585788108 1.00129016858383 1.0519756182006192 1.0 12.594230419437542 -2.5119086019356462 17.07006254451302 1.009856839744017 1.4106954077939389 0.0 0.07068531565636531 0.0 0.0 0.00880145554392012 0.0 0.0030767442530403285 2.5119086019356462 0.4008385680499218 ILGEESGAPSPS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 ILGEESGAPSPSPQK 15 0 Q9UL54-3;Q9UL54 Q9UL54-3 TAOK2 Serine/threonine-protein kinase TAO2 1 ILGEESGAPS(0.2)PS(0.799)PQK 88.075 3.7926e-05 3379100.0 1425.0 1398.2 1795.0 1905.1 2538.6 1547.0 1723.6 2232.5 2212.9 2679.3 2818.9 True False 1665.505162094925 1469.3624078049409 2049.5579912127137 2371.8495855231895 2165.175302863086 1710.7025131845094 2036.755809360225 2548.963711744507 1711.681683275159 2074.044269145336 2118.8893323178363 0.7860274421567086 0.6934587783296907 0.9672793948944556 1.1193834191088412 1.021844449277876 0.8073581225278932 0.9612374645032706 1.202971610110574 0.807820237314029 0.9788355802785392 1.0 11.049092523676741 -5.766004891560371 24.994900710645656 0.9482297202204364 0.7397430846577905 0.3689274672762126 0.11583658379805924 97.56553203702968 534158.7081985936 0.017547367701661442 0.05733850506695547 1.7139380029149354e-06 5.766004891560371 -0.2084866355626459 ILGEESGAPSPS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 ILGEESGAPSPSPQK 15 0 Q9UL54-3;Q9UL54 Q9UL54-3 TAOK2 Serine/threonine-protein kinase TAO2 1 ILGEESGAPS(0.359)PS(0.641)PQK 107.98 3.9254000000000006e-06 4748000.0 2126.0 2569.3 2149.8 2374.5 2449.2 2283.5 2366.4 2533.3 2817.0 2591.8 3109.9 True False 2341.829954921521 2785.8239279591353 2295.698355797586 2521.1674721192294 2277.1766412813067 2264.903933092012 2456.4546469437682 2482.7713441645974 2698.611286381379 2428.1533056806456 2727.402015280369 0.8586302795852366 1.02142035253749 0.8417161617304132 0.9243842521176918 0.8349251883379647 0.8304254086499918 0.9006573410085464 0.9103063392396062 0.9894438998219959 0.8902806744575344 1.0 11.413311651840354 -8.702952367525132 2.8155354975491256 0.9959921765704209 0.8885174368857087 0.15201092019087137 0.06004789204403749 0.1635882456151386 2.5863817332072547 0.008786050327517716 0.009728980169711512 1.9817443673011393e-09 8.702952367525132 -0.10747473968471222 ILGQS(ph)SPEKK ddPTM_A549_MK2206_60min_R1 1 ILGQSSPEKK 10 1 P29374;P29374-3;P29374-2;H7C485 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 ILGQS(0.603)S(0.397)PEKK 60.49 0.0033393 39095000.0 2862.1 3343.3 3988.9 2752.2 4710.3 3750.8 3234.2 3417.3 5272.2 5145.2 4927.9 True False 3345.152508373254 3513.459689611111 4554.586000639773 3426.4891235509544 4017.421109696678 4147.707166420464 3821.812275837109 3901.7127400423337 4078.0551179733775 3982.8957465034073 3704.1664268789464 0.9030783509346285 0.948515613152803 1.2295846017041336 0.9250364936863927 1.0845681988111082 1.1197410397985914 1.0317604112235552 1.05333084165169 1.100937335963455 1.0752475152309267 1.0 11.85493320449106 -5.543014707549222 24.998208085660053 1.057120556092272 0.9144374788671752 0.3631623807103861 0.07271521541813464 155.88911132585994 193531.62875402873 0.009438946953334403 0.03656481993730896 2.8640809750633428e-06 5.543014707549222 -0.14268307722509688 ILGQSS(ph)PEKK ddPTM_A549_MK2206_60min_R1 1 ILGQSSPEKK 10 1 P29374;P29374-3;P29374-2;H7C485 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 ILGQS(0.148)S(0.852)PEKK 82.36200000000001 0.00044022 34667000.0 4391.3 5324.4 5095.0 3981.7 6080.6 4694.3 4838.4 4685.8 7151.2 6385.3 7257.4 True False 5132.4440830227695 5595.389217648853 5817.547612940823 4957.216678745307 5186.151794922111 5191.047710175851 5717.474650735968 5350.026499660654 5531.4646181198 4942.856295216552 5455.187285949646 0.9408373744091001 1.0257006633045047 1.0664249104562313 0.9087161299691928 0.9506826297750652 0.9515801086327298 1.048080359305329 0.9807227908453585 1.0139825322526714 0.9060837027442392 1.0 12.41341301226002 -7.7415407034571935 24.998830053780946 1.0072458690680175 0.9765159074817097 0.0 0.052539416715518365 443.53965359520674 557220.5476836395 0.006560123976161518 0.00972245960422148 1.8132567237316978e-08 7.7415407034571935 -0.030729961586307808 ILGQSS(ph)PEKK ddPTM_A549_PD325901_60min_R1 3 ILGQSSPEKK 10 1 P29374;P29374-3;P29374-2;H7C485 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 ILGQS(0.147)S(0.853)PEKK;ILGQS(0.155)S(0.845)PEKK;ILGQS(0.086)S(0.914)PEKK 118.48 2.7478e-05 115016000.0 17852.4 17426.9 18235.3 18170.6 22137.8 21578.800000000003 19504.6 19989.3 21092.4 20320.1 20766.7 True False 19664.762505757742 18895.526022710874 19472.857115766914 19292.956693573247 20582.917299263972 21403.06940722835 20246.858226326665 19590.59773019751 20205.959778796805 19037.085418150044 18212.527550957522 1.0797382434007008 1.0375015752120271 1.069201244104261 1.0593234047055111 1.130151608099109 1.1751839137837343 1.1116995249383816 1.075666058727117 1.1094539032136963 1.0452742138555706 1.0 14.152643534274363 -10.747750885892616 0.8931377745930315 0.9972704548366775 1.0949337520963738 0.3254802847281436 0.03788533921746436 0.47549486212027736 0.6427918436911121 0.031311733869675736 0.007166767037026428 1.7875126095674564e-11 10.747750885892616 0.09766329725969625 ILGSAS(ph)PEEEQEKPILDRPTR ddPTM_A549_MK2206_60min_R1 6 ILGSASPEEEQEKPILDRPTR 21 2 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 ILGS(0.001)AS(0.999)PEEEQEKPILDRPTR;ILGSAS(1)PEEEQEKPILDRPTR;ILGS(0.001)AS(0.999)PEEEQEKPILDRPTR;ILGS(0.004)AS(0.996)PEEEQEKPILDRPTR;ILGS(0.005)AS(0.995)PEEEQEKPILDRPTR;ILGS(0.038)AS(0.962)PEEEQEKPILDRPTR 217.11 3.4393999999999993e-68 302834000.0 12823.1 14900.500000000002 15285.600000000002 13429.5 18081.9 13619.500000000002 13528.300000000001 14357.9 21156.4 20254.1 21673.7 True False 14987.32578530486 15658.871804818706 17453.327927844613 16719.72810287316 15422.076462948091 15060.706450107575 15986.216996848427 16393.176294224617 16364.50917982852 15678.684742916637 16291.522126310649 0.9199463174223896 0.9611668991646755 1.0713135207702698 1.0262839759994533 0.9466320177684066 0.9244505414128666 0.9812598769412002 1.0062396973791539 1.0044800634926554 0.9623830493773025 1.0 13.991833781540056 -8.215712460574657 6.563966771476617 1.0024821089473075 0.9777211464264254 0.02002251922239562 0.04282643932373271 0.525959003802185 59.30536486026748 0.006985061993622731 0.008995500267353811 6.085377710485204e-09 8.215712460574657 -0.024760962520882113 ILGSAS(ph)PEEEQEKPILDRPTR ddPTM_A549_PD325901_60min_R1 2 ILGSASPEEEQEKPILDRPTR 21 2 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 ILGSAS(1)PEEEQEKPILDRPTR;ILGS(0.002)AS(0.998)PEEEQEKPILDRPTR 251.32 1.0242999999999997e-98 496870000.0 6859.2 6239.6 7380.6 6669.0 8064.4 7084.9 6488.299999999999 7774.700000000001 7025.299999999999 8566.8 7982.6 True False 7555.540934523844 6765.432989878108 7881.491899153254 7080.928983602084 7497.984364669672 7027.202923391104 6735.215807033992 7619.627509365842 6730.0510721388355 8025.890785980766 7000.790805870627 1.0792410663361092 0.9663812528442992 1.1258002299603211 1.0114470179089277 1.0710196280086122 1.003772733431533 0.9620650000548605 1.088395257143847 0.9613272641278242 1.146426312188978 1.0 12.773302182043713 -7.678921998620289 0.822629283784652 0.985433768177581 1.0498421449862176 0.0 0.07007529229964314 0.6491889395420132 0.884518285392222 0.009276902396372085 0.01766238772855011 2.0944886023071947e-08 7.678921998620289 0.06440837680863665 ILGTQEITARDS(ph)GVR ddPTM_A549_PD325901_60min_R1 1 ILGTQEITARDSGVR 15 1 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ILGTQEIT(0.049)ARDS(0.951)GVR 56.121 0.0035691000000000004 3509600.0 860.95 903.51 1092.9 976.3 1309.0 648.09 951.84 1102.6 912.7 1141.5 1190.1 True False 948.353010202108 979.6519585686209 1167.0707661415863 1036.6038336618253 1217.060355804847 642.8121699135545 988.0627920668336 1080.6077780270336 874.3423929997462 1069.4254951903913 1043.725244665476 0.9086232368615977 0.9386109645001531 1.1181781528295252 0.9931769294265435 1.1660735064379193 0.6158825545314677 0.9466694392196263 1.0353373970305555 0.8377131792763921 1.0246235785291868 1.0 10.027526264455348 ILHTYYK ddPTM_A549_PD325901_60min_R1 1 ILHTYYK 7 0 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 0 72.234 0.021407 1359000.0 1286.3 1487.1 1088.1 989.68 1442.8 1473.8 966.75 1561.2 1476.2 1359.9 1268.8 False True 1416.8842290759885 1612.4231359779033 1161.9450092768413 1050.8102858736406 1341.4627053897889 1461.7978614368328 1003.540200275899 1530.0606412622922 1414.1604476237812 1274.0356819180138 1112.7456435858808 1.2733226476717585 1.4490491562670025 1.0442143862566948 0.9443400582430947 1.205542985607075 1.3136855397843779 0.9018594735108901 1.3750317964234775 1.2708748452760288 1.1449478047942452 1.0 10.11990813729289 -10.905834245384256 1.1805610609944093 1.0009014689700648 1.1992736497221246 0.053459085200656786 0.16866081699509305 0.705322220892625 1.759033822386683 0.11220575292105928 0.027229067868611297 1.2421262921576696e-11 10.905834245384256 0.19837218075205976 ILIPS(ph)DIESSK ddPTM_A549_MK2206_60min_R1 2 ILIPSDIESSK 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 ILIPS(0.921)DIES(0.032)S(0.047)K;ILIPS(1)DIESSK 81.92 0.00074262 6358600.0 1891.24 2049.83 2254.07 1223.17 2444.6099999999997 2028.1799999999998 1802.25 1634.99 2497.38 2827.0 2521.2 True False 2210.4350756213385 2154.1575914681735 2573.73102019657 1522.846704910188 2085.0111073552853 2242.800661403076 2129.6954962981363 1866.7548394468772 1931.727417496368 2188.37873656323 1895.1164584198557 1.166384823370905 1.1366887675411281 1.358085941769796 0.8035636533809297 1.1002021000301814 1.1834632385986024 1.1237808034625334 0.9850343661747172 1.0193185800871776 1.1547463095686985 1.0 10.888070792067586 -2.789421589163549 0.18519787662969114 0.9834389001777261 1.719585984197204 0.048786141480172907 0.13153001638809592 45.43691603419991 0.6265356138075994 0.12072183995511886 9.03256331765148 0.0016239715282148413 2.789421589163549 0.736147084019478 ILIPS(ph)DIESSK ddPTM_A549_PD325901_60min_R1 2 ILIPSDIESSK 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 ILIPS(1)DIESSK;ILIPS(0.989)DIES(0.003)S(0.008)K 107.09 0.00014509 10521600.0 3392.8 3371.2 3774.5 3985.3 4131.2 4526.299999999999 4442.1 4663.3 4485.5 4096.0 5123.2 True False 3737.234558352651 3655.3028552274286 4030.660267912357 4231.462929727005 3841.0387638662987 4489.43931348998 4611.1465463103905 4570.28682321192 4296.990033746425 3837.3778609722667 4493.078878640596 0.8317758622308832 0.8135407710299 0.8970820180953187 0.9417735686419233 0.8548789967000145 0.9991899618838394 1.0262776752553957 1.0171837500869079 0.9563575779124763 0.8540642095589662 1.0 12.13348867410517 -6.333066205800829 0.7453990133431252 0.986298760534471 0.8058199150415803 0.46723819018603374 0.05522267216575369 0.42214139967003994 0.34682334892884176 0.006850901548072451 0.0470778755080169 4.6444446782572917e-07 6.333066205800829 -0.18047884549289062 ILIVTQT(ph)PHYMR ddPTM_A549_MK2206_60min_R1 6 ILIVTQTPHYMR 12 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 ILIVT(0.107)QT(0.86)PHY(0.033)MR;ILIVT(0.103)QT(0.862)PHY(0.035)MR;ILIVT(0.015)QT(0.984)PHY(0.001)MR;ILIVT(0.013)QT(0.987)PHYMR;ILIVT(0.01)QT(0.99)PHYMR;ILIVTQT(1)PHYMR 127.79 8.1443e-08 190902700.0 10215.39 12768.619999999999 10450.89 10734.0 15049.770000000002 11476.689999999999 10636.939999999999 11354.85 16059.060000000001 14948.4 15838.249999999998 True False 11939.49808969325 13418.488218814407 11932.983350855171 13363.83048186757 12835.968769309775 12691.145718189733 12569.534311218475 12964.434760269703 12421.7085510492 11571.546057885318 11905.175411537464 1.0028830048251556 1.1271138605660838 1.0023357857701751 1.1225227701320977 1.0781839263678774 1.066019212609885 1.0558042092380404 1.0889746947958194 1.0433872766806238 0.9719761076910449 1.0 13.539301257065791 -9.66904125217645 0.7327637691659521 1.0042526578593811 1.0700536214751855 0.3563798841074639 0.039691695043543536 0.47531790086487924 0.5440968118452405 0.013791788429693334 0.007679822578634448 2.142687064794708e-10 9.66904125217645 0.06580096361580434 ILIVTQT(ph)PHYMR ddPTM_A549_PD325901_60min_R1 11 ILIVTQTPHYMR 12 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 ILIVT(0.005)QT(0.988)PHY(0.007)MR;ILIVT(0.005)QT(0.995)PHYMR;ILIVT(0.01)QT(0.988)PHY(0.002)MR;ILIVT(0.031)QT(0.714)PHY(0.255)MR;ILIVT(0.107)QT(0.857)PHY(0.036)MR;ILIVT(0.002)QT(0.998)PHYMR;ILIVT(0.015)QT(0.796)PHY(0.188)MR;ILIVT(0.003)QT(0.994)PHY(0.003)MR;ILIVTQT(1)PHYMR;ILIVT(0.009)QT(0.991)PHYMR;ILIVTQT(1)PHYMR 202.13 8.5482e-25 520982700.0 21746.36 24905.699999999997 25640.93 26489.850000000006 29139.060000000005 28477.649999999998 26897.780000000002 27829.720000000005 30512.7 27822.100000000002 31431.309999999998 True False 23954.034458375878 27004.590745561738 27381.077701237788 28126.06787168568 27092.43294989977 28245.73746013476 27921.389736929985 27274.634402607026 29230.35732977249 26065.40785785071 27565.458129490326 0.8689873517011915 0.9796532536737144 0.9933111785268941 1.020337399783521 0.9828399304169554 1.024678687633225 1.0129122326125564 0.989449704571673 1.0603980239494373 0.9455822477321784 1.0 14.750573958328426 -4.082591210419823 0.8369461429770717 1.0223900883638153 1.9105198223920402e-17 0.5633511770580628 0.03117127684071472 5.1556319388558824 0.5818311673503552 0.004011923921336357 7.707007032650226 8.268158426728733e-05 4.082591210419823 -1.0223900883638153 ILKS(ph)PEIQR ddPTM_A549_MK2206_60min_R1 7 ILKSPEIQR 9 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 1 ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR 115.57 5.6625e-05 503009700.0 35977.6 42106.7 42338.5 39038.5 56965.7 42304.399999999994 40715.7 43630.200000000004 61007.3 58801.799999999996 58805.299999999996 True False 42049.73931213078 44249.75117774298 48342.73593925321 48602.934252504834 48586.1209920065 46781.02352861202 48113.21565744265 49814.914461883636 47189.24395863911 45518.4325403763 44202.32106628472 0.9513016126251385 1.001073023097297 1.0936696257818594 1.0995561563299145 1.0991757857952287 1.0583386211430017 1.088477131897514 1.1269750832129926 1.0675738925083884 1.0297747141404174 1.0 15.431834507150311 -2.0810834126550604 18.239778954056277 1.0491073031184948 0.005275796786270437 0.0 0.051992891530175486 0.0 0.0 0.007515838873051036 0.0 0.008296913977508957 2.0810834126550604 -1.0438315063322243 ILKS(ph)PEIQR ddPTM_A549_PD325901_60min_R1 5 ILKSPEIQR 9 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 1 ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR 104.24 0.00017222 1355669000.0 46095.200000000004 44844.1 47626.6 46696.6 54750.0 51683.7 53529.100000000006 56435.9 49689.2 49205.700000000004 52354.7 True False 50774.75077050727 48623.269687382635 50858.827478011575 49580.94292632672 50904.54887724627 51262.80508287615 55566.17919274743 55310.24170139292 47600.9357228476 46098.8437045027 45915.403803787594 1.1058326087577353 1.0589751076820906 1.1076637307895394 1.0798324487834898 1.10865950552845 1.1164620331324941 1.2101860070794748 1.204611897518156 1.0367095087797304 1.0039951712392428 1.0 15.486690612996997 -8.933903150424783 8.967629835833558 1.016114746925165 1.1220421253398523 0.5573309952671781 0.0441454472134934 0.18457102838150696 23.11086254619221 0.008525789561307813 0.009046816141353269 1.1643856635721214e-09 8.933903150424783 0.10592737841468725 ILLGLGT(ph)PRPNPR ddPTM_A549_MK2206_60min_R1 1 ILLGLGTPRPNPR 13 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;A0A2R8Y692;A0A2R8YEJ8;A0A2R8Y5B2;Q5HYF7;P49815-8;A0A2R8YGE6 P49815 TSC2;DKFZp686N1252 Tuberin 1 ILLGLGT(1)PRPNPR 46.797 0.014224 2402200.0 677.29 615.98 490.95 511.91 950.61 699.95 491.72 538.56 908.73 723.44 884.55 True False 791.5999938493137 647.330750936695 560.5740923598229 637.3279729805132 810.776528265452 774.0182444107937 581.0591590732245 614.9025292708274 702.904105943619 560.0144015490993 664.89182266194 1.1905696037591331 0.9735880768469404 0.8431057102124164 0.9585438582007627 1.2194111893562665 1.1641265812413795 0.8739153336958099 0.9248158998391993 1.05717062834296 0.8422639329613699 1.0 9.376975824216455 -5.252921788240714 23.634509208083156 1.0138360910756645 1.1905697991485173 0.16090991674717947 0.11972813627664883 697.2881394366383 1934728.9977465481 0.015031634257284604 0.23245677882882068 5.5857077826148614e-06 5.252921788240714 0.17673370807285282 ILLGLGT(ph)PRPNPR ddPTM_A549_PD325901_60min_R1 2 ILLGLGTPRPNPR 13 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;A0A2R8Y692;A0A2R8YEJ8;A0A2R8Y5B2;Q5HYF7;P49815-8;A0A2R8YGE6 P49815 TSC2;DKFZp686N1252 Tuberin 1 ILLGLGT(1)PRPNPR;ILLGLGT(1)PRPNPR 64.39399999999999 0.0023761999999999998 6463300.0 1202.75 1541.08 1678.49 1622.51 1889.71 1951.09 1452.92 1600.92 1868.81 1735.33 1933.1999999999998 True False 1324.8522945822472 1670.95222002073 1792.402424980318 1722.7287577124343 1756.9832887455898 1935.2009699218277 1508.21166566833 1568.9883947025555 1790.270414661835 1625.7609676467298 1695.4286555644906 0.7814261545208693 0.9855632760108026 1.0571971985359303 1.0161021828068928 1.036306236171645 1.14142282753709 0.8895754243142558 0.9254228360202884 1.0559396933548744 0.958908511019259 1.0 10.727434361016638 -5.273233164646759 3.58477432947786 1.020310612888851 0.756798603183773 0.48635990461226075 0.0660050157039005 0.1549561520089866 3.566116072693885 0.008624079529667431 0.10741302912215533 5.3304863473193405e-06 5.273233164646759 -0.26351200970507804 ILLS(ph)PER ddPTM_A549_PD325901_60min_R1 1 ILLSPER 7 0 P24928;P24928-2 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 ILLS(1)PER 49.418 0.054666 1106700.0 551.58 581.21 638.9 488.67 660.4 615.34 432.9 650.02 685.36 671.25 584.72 True False 607.5759955482654 630.1906064566722 682.2595960178048 518.854036049907 614.0157822563186 610.328875055327 449.3742463919696 637.0548411691749 656.5567026036003 628.867160443758 512.8031468454732 1.1848133134240513 1.2289132980819486 1.330451266172505 1.0117996335273216 1.1973713227648048 1.1901816102529534 0.8763094555021967 1.242299009060378 1.2803289266893783 1.2263324909612134 1.0 9.002261304938143 -11.041959130481805 1.3564760259481454 1.000507833203325 1.1808626863593028 0.0 0.13730774968847675 0.5301358485330327 1.7470026769053488 0.08637164456869688 0.01956093518803415 9.079059651423341e-12 11.041959130481805 0.18035485315597777 ILLVDS(ph)PGMGNADDEQQEEGTSSK ddPTM_A549_MK2206_60min_R1 4 ILLVDSPGMGNADDEQQEEGTSSK 24 0 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 1 ILLVDS(1)PGMGNADDEQQEEGTSSK;ILLVDS(1)PGMGNADDEQQEEGTSSK;ILLVDS(1)PGMGNADDEQQEEGTSSK;ILLVDS(1)PGMGNADDEQQEEGTSSK 113.5 5.5096e-13 19712600.0 5213.799999999999 6564.91 5448.75 5627.679999999999 8586.800000000001 6020.92 5444.35 5945.4 8257.0 7769.900000000001 8103.499999999999 True False 6093.761974828433 6899.035878002237 6221.464682239707 7006.4618526361555 7323.693094865183 6658.049758036765 6433.517922192128 6788.178657023877 6386.80268371954 6014.6741935700875 6091.177304777605 1.00042433012889 1.1326276568227607 1.0213895230664047 1.1502639805182897 1.2023444284113773 1.0930645136227661 1.0562027011011499 1.114428018980761 1.0485333728029984 0.9874403407782084 1.0 12.572505384322621 -9.227029673545346 0.8479699508074573 1.0093995298966927 1.1014152213601123 0.3233103778963028 0.05536823443458854 0.44163023504337445 0.6771527427072126 0.01550761193339361 0.012376077277924825 5.928848138293848e-10 9.227029673545346 0.09201569146341959 ILLVDS(ph)PGMGNADDEQQEEGTSSK ddPTM_A549_PD325901_60min_R1 2 ILLVDSPGMGNADDEQQEEGTSSK 24 0 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 1 ILLVDS(1)PGMGNADDEQQEEGTSSK;ILLVDS(1)PGMGNADDEQQEEGTSSK 137.35 1.1751e-23 28897000.0 6840.2 7987.7 6685.3 7169.5 8718.599999999999 8435.6 8316.2 9071.3 7784.1 8471.7 8857.8 True False 7534.612068510905 8660.851511835584 7139.0046599746975 7612.343731884114 8106.235613537157 8366.903270414265 8632.677541799258 8890.365805202819 7456.961346936917 7936.795416210632 7768.346754220533 0.9699119139368181 1.1148899226376778 0.918986353962133 0.979918118066542 1.0434955943660793 1.0770506949716858 1.1112631573904879 1.1444347280678087 0.9599161292440453 1.0216839782413911 1.0 12.923391884161363 ILMDS(ph)PEDADLFHSEEIK ddPTM_A549_PD325901_60min_R1 1 ILMDSPEDADLFHSEEIK 18 0 Q9Y478;F5H4Y8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 ILMDS(1)PEDADLFHSEEIK 73.294 0.00014357 1691000.0 811.78 770.19 689.7 688.16 1160.7 1121.2 1133.3 986.32 1135.5 672.73 1030.6 True False 894.1913079991489 835.0966142820404 736.5071895030213 730.666080275245 1079.1764361976211 1112.0693189326748 1176.428351665555 966.6470738469286 1087.7788838076176 630.2537129911798 903.8427335116713 0.9893217866840351 0.9239401760054718 0.8148621017746013 0.8083995734926268 1.1939869583337042 1.2303792216285099 1.3015852294290353 1.0694859160854737 1.203504595961407 0.697304619070704 1.0 9.81992795874194 -6.762505293380894 24.999999936300593 1.1279008717863892 0.8820266421191731 0.28698272031257976 0.1592986111743244 17.705143886126702 415274.8403964898 0.016437148592238 0.03236321354025579 1.727804921098462e-07 6.762505293380894 -0.24587422966721606 ILMEHIHK ddPTM_A549_MK2206_60min_R1 1 ILMEHIHK 8 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 85.064 0.0029949 2642100.0 154.82 165.93 193.37 179.22 406.45 328.68 293.44 189.35 372.61 393.82 304.57 False True 180.94983101441136 174.3751282556671 220.7927736828984 223.12890804549156 346.66174342105916 363.4606994398739 346.75424965111677 216.19094236005492 288.2144299359016 304.8557884801315 228.9368632956272 0.7903918504410975 0.7616734402030123 0.9644264820636932 0.9746307555431306 1.5142242207337893 1.587602338075784 1.5146282894745153 0.944325606841597 1.2589253901139066 1.3316151190840324 1.0 7.838805973384154 -6.278051791979922 2.3188588479745786 1.1985888430051563 0.8009819711277568 0.4389410282768176 0.21568506050640554 0.28730625080708133 2.989961431140697 0.03512737071383497 0.10586475623189891 5.271669901421859e-07 6.278051791979922 -0.3976068718773995 ILMVGLDAAGK ddPTM_A549_MK2206_60min_R1 1 ILMVGLDAAGK 11 0 P18085;F5H1V1;F5H6T5;F8WDB3;F5H0C7;C9JPM4;C9J1Z8;F5H423;P84085;P61204-2;P84077;P61204 P18085;P61204-2 ARF4;ARF3;ARF5;ARF1 ADP-ribosylation factor 4;ADP-ribosylation factor 5;ADP-ribosylation factor 3;ADP-ribosylation factor 1 0 57.59 0.007871300000000001 1093400.0 2079.0 2109.4 2150.3 2076.2 3203.9 1970.3 2237.5 2602.7 3515.6 2612.2 3026.4 False True 2429.88437333007 2216.7594500241303 2455.2448738187745 2584.86909320416 2732.610554180667 2178.795838220711 2644.024787330881 2971.640695434461 2719.3222132595884 2022.1022057483096 2274.861355609174 1.068146138813538 0.9744591443158588 1.0792942909530838 1.1362754423827164 1.2012207018431302 0.9577708253948787 1.1622795300519975 1.3062952993188897 1.1953793168777067 0.8888903056717585 1.0 11.15156290572276 -5.968723773895214 6.555921658025969 1.1147282082087282 1.0217062545234947 0.06949221266885619 0.115447872685011 0.31809132789080885 42.64626056107403 0.01503058712957474 0.046832099382856866 1.0746727235241098e-06 5.968723773895214 -0.09302195368523347 ILMVGLDAAGK ddPTM_A549_PD325901_60min_R1 1 ILMVGLDAAGK 11 0 P18085;F5H1V1;F5H6T5;F8WDB3;F5H0C7;C9JPM4;C9J1Z8;F5H423;P84085;P61204-2;P84077;P61204 P18085;P61204-2 ARF4;ARF3;ARF5;ARF1 ADP-ribosylation factor 4;ADP-ribosylation factor 5;ADP-ribosylation factor 3;ADP-ribosylation factor 1 0 64.711 0.0036783000000000002 1616300.0 2944.3 2865.8 2961.9 3609.7 4274.0 3615.4 3601.1 3596.9 4124.9 3839.4 3818.6 False True 3243.2031685208995 3107.3110235259755 3162.9123453516013 3832.6629707764923 3973.808984499553 3585.9573810820502 3738.1418310975296 3525.157007786537 3951.544797726148 3596.979628763895 3348.936408099817 0.9684278150749029 0.9278501126538442 0.9444527933411057 1.1444418477181957 1.1865883672465096 1.070774999611509 1.1162176212293464 1.052619870374519 1.1799402306263111 1.0740662677452324 1.0 11.709487266084418 -6.249416933257356 23.71893003016965 1.0960188052349669 0.9450041895266826 0.629605615419394 0.05314124758603939 257.8120579104387 508631.3662058208 0.009913368038048442 0.025972620846101604 5.630968096324688e-07 6.249416933257356 -0.15101461570828423 ILNDLS(ph)SDAPGVPR ddPTM_A549_PD325901_60min_R1 1 ILNDLSSDAPGVPR 14 0 C9J4L5;C9JBT4;H7C3I0;E7EWP8;C9J896;P16220-3;P16220;P16220-1 C9J4L5 CREB1 Cyclic AMP-responsive element-binding protein 1 1 ILNDLS(0.967)S(0.033)DAPGVPR 121.99 1.7506e-06 1927800.0 1174.4 1063.4 1165.8 1203.0 1232.1 1347.1 1329.1 1528.0 1346.2 1193.4 1156.5 True False 1293.6242234524138 1153.0164500026244 1244.9181985248986 1277.3065777887696 1145.5615465142482 1336.129664229582 1379.679627811427 1497.5228413071882 1289.623895536604 1118.0485203330823 1014.2578316575283 1.2754392256832143 1.13680803244904 1.2274178810041019 1.2593509637498779 1.1294579255475303 1.3173471503257133 1.3602849144942921 1.4764715583806682 1.2714951319913053 1.102331661078659 1.0 9.986208727112466 -10.484132483941183 0.9590074817005629 1.0101894941140668 1.2693651837042241 0.42932232984936325 0.09607953461537416 0.34068101073563245 0.5915332220768076 0.054938321390192266 0.01850424929749741 3.2799522108821194e-11 10.484132483941183 0.25917568959015735 ILNSLT(ph)LPNKK ddPTM_A549_MK2206_60min_R1 2 ILNSLTLPNKK 11 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ILNS(0.007)LT(0.993)LPNKK;ILNS(0.478)LT(0.522)LPNKK 69.714 0.0021128 50323000.0 2373.3 3355.3 2993.8 2876.3999999999996 4789.5 3549.4 3644.8 3284.7 5153.299999999999 5776.799999999999 4669.6 True False 2773.855018385886 3526.070438354969 3418.3658574332153 3581.1181291265034 4084.970894612284 3924.9951520989653 4307.012980944622 3750.3162839718657 3986.0857781290915 4471.816867838156 3510.0094455962862 0.790269958351824 1.0045757690990926 0.9738907858843376 1.0202588296790571 1.1638062398200535 1.1182292278510324 1.2270659232408245 1.0684633024783088 1.1356339177748078 1.2740184712176683 1.0 11.777259197555622 -4.567687049131185 0.8418245882967466 1.0852654151873355 0.13919432517925887 0.5440529785303082 0.08658432466441429 3.655893297767851 0.8272830893458744 0.011947614262636937 4.249729792535821 2.7059075279001948e-05 4.567687049131185 -0.9460710900080767 ILNSLT(ph)LPNKK ddPTM_A549_PD325901_60min_R1 2 ILNSLTLPNKK 11 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ILNS(0.018)LT(0.982)LPNKK;ILNS(0.089)LT(0.911)LPNKK 66.797 0.0030633 99390000.0 4830.9 4967.1 5569.4 5581.8 6039.9 5295.299999999999 5807.6 5947.5 5849.9 6475.3 6052.200000000001 True False 5321.329411679385 5385.694949038968 5947.372975522874 5926.575108812432 5615.678260523829 5252.176832451121 6028.611396040658 5828.8724467765105 5604.049046575232 6066.4484529183865 5307.817768056804 1.0025456118150657 1.0146721655462325 1.1204930605031325 1.1165747144672895 1.0580013304751668 0.9895171729631455 1.1357984880946161 1.0981674016495981 1.0558103709402364 1.1429270404547662 1.0 12.373903124542421 -10.146300237342325 0.8916835452792353 1.0043253213721943 1.0672811230526338 0.0 0.06259828970383488 0.6365424025916101 1.0042453290739188 0.021490336872510035 0.009390434166363388 7.140025497247016e-11 10.146300237342325 0.06295580168043946 ILNT(ph)SPDGHPYEK ddPTM_A549_MK2206_60min_R1 1 ILNTSPDGHPYEK 13 0 Q16600 Q16600 ZNF239 Zinc finger protein 239 1 ILNT(0.586)S(0.413)PDGHPY(0.001)EK 48.405 0.028974 6336000.0 2067.8 2521.2 2398.3 2192.7 2701.3 2411.3 2144.6 2663.3 3485.1 3938.4 4829.4 True False 2416.79408714378 2649.51831108412 2738.4150029668267 2729.911598434042 2303.9423483904734 2666.4621655086044 2534.2460598479565 3040.830931014175 2695.730414561096 3048.712704662406 3630.1266953406525 0.6657602585181912 0.7298693774200319 0.7543579695115442 0.7520155155846058 0.6346727102796809 0.7345369430028619 0.6981150446073183 0.837665234912365 0.742599540126554 0.8398364466384867 1.0 11.825804185376217 -11.060615414532412 0.3734075682222763 1.1299236746504935 0.7073868683016605 0.522106244789909 0.0660113335282833 0.9059616056899843 0.13229141499943983 0.15723121087596773 0.014637539631823408 8.697302699816534e-12 11.060615414532412 -0.42253680634883295 ILNT(ph)SPDGHPYEK ddPTM_A549_PD325901_60min_R1 2 ILNTSPDGHPYEK 13 0 Q16600 Q16600 ZNF239 Zinc finger protein 239 1 ILNT(0.499)S(0.499)PDGHPY(0.001)EK;ILNT(0.586)S(0.414)PDGHPYEK 54.768 0.017074000000000002 14587900.0 5575.9 6837.3 6958.7 7037.6 8655.0 8133.4 6776.299999999999 7450.5 6975.5 8286.900000000001 8838.2 True False 6141.96126323937 7413.503266506433 7430.959228062456 7472.296568450745 8047.10265812907 8067.164287020178 7034.175804633638 7301.893932695824 6682.343992954678 7763.663719748801 7751.157429965905 0.7923927902037705 0.9564382266119246 0.9586902724145989 0.9640233263180689 1.0381807789142616 1.040768989652125 0.9075000563708818 0.9420391726875225 0.8621091821875266 1.0016134738451508 1.0 12.920196039409506 -6.935390088012769 0.0031971005023024362 1.872896293994937 1.9851973791853587e-08 0.03682915853020485 0.06996789780958708 155176.25781298836 138.88356918894482 40177.3980440247 41183.21679628215 1.1604058564797127e-07 6.935390088012769 -1.8728962741429631 ILPKPTR ddPTM_A549_PD325901_60min_R1 1 ILPKPTR 7 1 P62081;A0A2R8Y623;B5MCP9 P62081 RPS7 40S ribosomal protein S7 0 53.166000000000004 0.046044 5318200.0 1793.4 1788.1 1837.2 2340.2 1908.0 2232.6 1935.9 2047.0 2157.4 2176.2 1878.2 False True 1975.464647768699 1938.7894623374948 1961.8834399810805 2484.748839020184 1773.9886622426634 2214.4184458161703 2009.5717338651268 2006.1709791595656 2066.731980560594 2038.7943606073852 1647.1933068907651 1.1992913275598343 1.1770260686629095 1.1910462674744127 1.50847434155156 1.0769766091335307 1.344358574401991 1.219997510588715 1.2179329352341803 1.254699112675335 1.237738371130104 1.0 10.685794157593897 -10.70343963934201 0.6643751964001241 0.9734954742307588 1.2479568262362506 0.0 0.1251850503996095 0.6847441326272417 0.4553084085196739 0.1082640001738558 0.019740003247464336 1.9795221270933942e-11 10.70343963934201 0.2744613520054918 ILPPLS(ph)PPQHR ddPTM_A549_MK2206_60min_R1 2 ILPPLSPPQHR 11 0 A0A087WV20;A0A087WTU9;Q8TCU4-3;Q8TCU4-2;Q8TCU4 A0A087WV20 ALMS1 Alstrom syndrome protein 1 1 ILPPLS(1)PPQHR;ILPPLS(1)PPQHR 110.31 2.6433000000000003e-05 11893000.0 594.3299999999999 690.23 690.31 354.8 810.0899999999999 664.34 747.03 679.64 875.0 1021.19 790.15 True False 694.6383740265799 725.3597587893037 788.2063381136759 441.72601592757735 690.9268341197339 734.6400178467987 882.7556812870558 775.9810513102069 676.8138970878769 790.5024697527432 593.9339479693991 1.1695549250913828 1.2212801798402604 1.3270942683247433 0.7437291931835088 1.1633058465203814 1.236905249074345 1.4862859486397593 1.306510688542402 1.1395440509872117 1.3309602396956635 1.0 9.214158686060687 -9.74833150117757 1.1872752261991413 1.0267849962081874 1.2005529750632697 0.0 0.19505452315544083 0.5968894636054857 1.7138970500669901 0.05114953309741747 0.034228167874459633 1.785124451919858e-10 9.74833150117757 0.17376797885508233 ILPPLS(ph)PPQHR ddPTM_A549_PD325901_60min_R1 2 ILPPLSPPQHR 11 0 A0A087WV20;A0A087WTU9;Q8TCU4-3;Q8TCU4-2;Q8TCU4 A0A087WV20 ALMS1 Alstrom syndrome protein 1 1 ILPPLS(1)PPQHR;ILPPLS(1)PPQHR 123.95 1.7782e-06 18696600.0 1123.29 1243.44 1233.69 1179.19 978.97 1277.45 1309.41 991.06 1414.22 1530.75 1485.6399999999999 True False 1237.3255738776077 1348.229052653059 1317.4156221806327 1252.025888165204 910.2105244631553 1267.0468707371979 1359.240314086646 971.2925308284705 1354.7852514825256 1434.0981837605702 1302.9156982478935 0.9496589653049013 1.034778423858198 1.0111288274078194 0.9609415941866968 0.6985951014997888 0.972470338979774 1.0432296701271584 0.7454761134082766 1.0398103678575552 1.1006837861337349 1.0 10.347528025779013 ILPT(ph)PPATLK ddPTM_A549_MK2206_60min_R1 1 ILPTPPATLK 10 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 ILPT(1)PPATLK 82.417 0.0011113 1508700.0 1262.5 1581.0 1390.3 1321.6 1876.7 1392.2 1181.3 1222.4 2035.9 1647.6 1914.0 True False 1475.5791348384857 1661.4661470030103 1587.4654457844224 1645.392059328878 1600.639916049457 1539.5216799324323 1395.9269190051264 1395.678943442995 1574.7719006642378 1275.406015692104 1438.7009762873242 1.0256329558115185 1.154837714290393 1.10340193824084 1.143665074569516 1.1125591366317331 1.0700775945153547 0.9702689732006858 0.9700966124626182 1.0945790171965093 0.8864983319767981 1.0 10.49055105404677 -7.468730459096573 4.632874389508181 1.0334198739845486 1.1114054016455708 0.37164341956581015 0.06388959018227175 0.19739904471973757 8.933456615666186 0.007980149341099203 0.012717965646325831 3.398361233382937e-08 7.468730459096573 0.07798552766102218 ILPT(ph)PPATLK ddPTM_A549_PD325901_60min_R1 2 ILPTPPATLK 10 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 ILPT(0.998)PPAT(0.002)LK;ILPT(0.999)PPAT(0.001)LK 99.522 0.00049998 6055200.0 4335.6 4366.3 4418.2 4548.8 5981.2 4441.8 4816.700000000001 4674.4 5084.6 5229.1 5671.2 True False 4775.746920299972 4734.263424531181 4718.0456207949055 4829.7690449256515 5561.101146019827 4405.627453474094 5000.0021542993745 4581.16542500414 4870.911944172799 4898.933733596212 4973.678352698807 0.9602042153989644 0.9518636085428172 0.9486028822581197 0.9710658193859545 1.1181063091870975 0.8857885735782495 1.0052926224282845 0.9210819639187801 0.9793379464375204 0.9849719636449675 1.0 12.280097496283915 -6.875353023078823 0.004021396005872318 1.9445147665272562 5.957385036554897e-09 0.012108466503645055 0.055640956836421916 50519.43918558328 55.14043711855087 13117.361958021183 13546.1726941405 1.332437898802403e-07 6.875353023078823 -1.9445147605698712 ILPTS(ph)ETK ddPTM_A549_MK2206_60min_R1 2 ILPTSETK 8 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 ILPT(0.024)S(0.976)ETK;ILPT(0.026)S(0.951)ET(0.023)K 105.2 0.0020029 25785000.0 5935.6 5815.6 6215.6 5545.5 7701.700000000001 6400.0 5501.1 6383.6 8507.1 8672.7 8185.900000000001 True False 6937.38416851273 6111.589199564016 7097.065543276738 6904.147748946957 6568.790132380298 7077.243752023831 6500.578662608227 7288.494848955088 6580.255433047173 6713.531046548259 6153.115110653295 1.1274588633164977 0.9932512377320257 1.1534101695885908 1.1220573034613557 1.067555216220044 1.150188745822507 1.056469535463971 1.184521127572607 1.0694185489321242 1.0910784091987291 1.0 12.58710126696458 -9.775013346445009 0.9622965476996119 1.0102114139239857 1.1030618382533441 0.07515507709486491 0.056866966040997814 0.36410325798407883 0.6965314287633247 0.01606997689368354 0.009682044148506565 1.678752427042862e-10 9.775013346445009 0.09285042432935842 ILPTS(ph)ETK ddPTM_A549_PD325901_60min_R1 2 ILPTSETK 8 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 ILPT(0.27)S(0.729)ET(0.001)K;ILPT(0.006)S(0.991)ET(0.002)K 130.41 0.0010703 40051000.0 14059.7 13495.8 13296.1 14038.7 15819.7 13419.0 15322.2 14250.4 14800.3 15258.4 16226.2 True False 15487.0303937959 14633.138429514223 14198.453301944488 14905.838614799013 14708.578847002233 13309.720113055273 15905.294705629562 13966.164592777463 14178.294860429663 14294.982019985173 14230.480266356584 1.088299910046608 1.028295472508373 0.9977494108552462 1.047458577349571 1.0335967986812054 0.9352966213320183 1.117692053108885 0.981426089026383 0.9963328429575005 1.0045326476985519 1.0 13.796696731940816 -2.0000000000000004 0.4782539180469865 1.0024364380493107 3.019683550661649 0.17233579244777253 0.043856751478237956 96.93058746291968 0.9711612971834944 0.007691247032083327 195.73402902859522 0.00999999999999999 2.0000000000000004 2.0172471126123384 ILQEDPTNT(ph)AAR ddPTM_A549_MK2206_60min_R1 2 ILQEDPTNTAAR 12 0 H0YAS9;Q15006 H0YAS9 EMC2 ER membrane protein complex subunit 2 1 ILQEDPT(0.018)NT(0.982)AAR;ILQEDPT(0.084)NT(0.916)AAR 77.22 0.0011558 3976200.0 2465.7 3265.3999999999996 2486.8 2109.59 3123.8999999999996 2613.0 2501.6 2259.1400000000003 3480.3 3213.6 3819.1000000000004 True False 2881.8498794227758 3431.5949123489127 2839.4656337313527 2626.4396447030927 2664.3784482053065 2889.5059256309783 2956.1083387651074 2579.380013326086 2692.017606897071 2487.645528057868 2870.7120682021523 1.0038798078511575 1.1953810869294272 0.9891154411419713 0.9149087690804043 0.9281245854356732 1.006546758080338 1.0297474175515053 0.8985157522055078 0.9377525655448291 0.8665604452681358 1.0 11.487192920463773 -5.924219380750704 8.847268162014002 0.9651781621621626 1.0989907553293685 0.4385818245906008 0.06343160040211625 0.17530861407631265 18.58277571732715 0.007376939836119505 0.02304606087361519 1.1906404126074587e-06 5.924219380750704 0.13381259316720595 ILQQS(ph)VVK ddPTM_A549_MK2206_60min_R1 1 ILQQSVVK 8 0 Q9H2J4 Q9H2J4 PDCL3 Phosducin-like protein 3 1 ILQQS(1)VVK 85.355 0.0029933000000000004 2688900.0 1409.3 1585.5 1934.4 1570.7 1674.9 1288.3 1766.2 1484.6 2436.5 2569.7 1985.5 True False 1647.1553859230723 1666.195177781956 2208.727007354806 1955.5215705114024 1428.5244287266135 1424.627050895672 2087.0956779368926 1695.0465963968184 1884.6366402909864 1989.2029852658409 1492.4455529877134 1.103661961152048 1.116419406018809 1.4799380807783409 1.3102800076000503 0.9571702135912852 0.9545588098967657 1.3984400796121201 1.1357510449902308 1.262784184332989 1.3328479429508655 1.0 10.543462585085214 -10.900779481076125 1.1048585803601034 0.997943183521961 1.1970170960918731 0.0 0.18535907086959616 0.7636626357133793 1.6272192689945617 0.11883270596372246 0.027158715373326443 1.2566678919190725e-11 10.900779481076125 0.19907391256991214 ILQRT(ph)PGR ddPTM_A549_PD325901_60min_R1 1 ILQRTPGR 8 1 F8WE79;F8VUZ7;Q15075 F8WE79 EEA1 Early endosome antigen 1 1 ILQRT(1)PGR 52.79 0.010451 2667100.0 474.8 354.83 468.72 526.14 809.14 706.61 414.87 460.6 534.19 412.22 559.52 True False 523.0013464707138 384.73276937599354 500.5301578423316 558.6384728493628 752.3087977814621 700.8556024357987 430.65810487557474 451.41297166629016 511.73985199576464 386.1923588500946 490.70258708951116 1.0658214572961093 0.7840447136379429 1.0200275503153762 1.138446153632076 1.5331258028281605 1.4282696298643167 0.8776356925891172 0.919931917098179 1.0428717220160406 0.7870192026920119 1.0 8.938705067399265 ILRLS(ph)GKPQNAPEGYQNR ddPTM_A549_MK2206_60min_R1 1 ILRLSGKPQNAPEGYQNR 18 2 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ILRLS(1)GKPQNAPEGYQNR 48.641000000000005 0.004171500000000001 4476500.0 1021.2 1266.5 1788.0 1398.2 1862.7 1545.6 1308.2 1308.6 2020.5 1780.8 1957.2 True False 1193.5535940570783 1330.959440341122 2041.565285954504 1740.7590627675843 1588.6992975037692 1709.1543661137537 1545.8830063849202 1494.0980574194239 1562.859976075493 1378.516043180686 1471.1732240279784 0.8112937175332791 0.9046925396705087 1.3877123730982734 1.183245476696141 1.0798859519438586 1.1617628286043693 1.0507824511327029 1.0155826880322623 1.0623222000985595 0.9370181707130293 1.0 10.522751412106423 -7.985371340412973 23.553463099377847 1.029402678105515 1.0980775274249939 0.057825147631687 0.1432878486686015 333.6445634901191 537193.4537222867 0.022517086511601288 0.03110337901911052 1.0342574540074641e-08 7.985371340412973 0.06867484931947887 ILRLS(ph)GKPQNAPEGYQNR ddPTM_A549_PD325901_60min_R1 1 ILRLSGKPQNAPEGYQNR 18 2 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ILRLS(1)GKPQNAPEGYQNR 62.611000000000004 0.00058249 9848300.0 1640.4 1558.4 1751.4 1921.7 2018.7 1920.6 1783.0 1663.7 2070.2 1656.5 2132.9 True False 1806.9322004013454 1689.7318372052757 1870.2605360237649 2040.3990445026434 1876.9134761369314 1904.9592703729013 1850.8530406950363 1630.5161983525986 1983.1966933144233 1551.9083072999413 1870.5668215670914 0.9659811023952434 0.9033261029347677 0.9998362605709696 1.0907918503511533 1.0033929044911227 1.0183861107816492 0.9894610656808616 0.871669581408812 1.0602116270045754 0.8296460139284466 1.0 10.869259788333002 -5.8864460362717885 6.199626179980896 1.0167908850609695 0.9356346483129221 0.0 0.07784823263000748 0.21210409093379426 10.654249939343536 0.0076382556495439985 0.024350619922326965 1.2988349419362922e-06 5.8864460362717885 -0.0811562367480474 ILRLS(ph)TFEK ddPTM_A549_MK2206_60min_R1 2 ILRLSTFEK 9 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 ILRLS(0.998)T(0.002)FEK;ILRLS(0.956)T(0.044)FEK 60.255 0.0022776999999999997 19690200.0 1213.6 1647.5500000000002 1266.97 715.51 1591.65 1371.87 1005.3699999999999 1209.8600000000001 1453.06 1477.62 1423.34 True False 1418.4260103287024 1731.4032577449796 1446.6453972851093 890.8099821204647 1357.5203934460055 1517.0403728263946 1188.0327152799318 1381.3613600408555 1123.944230060012 1143.8246157483406 1069.885395814421 1.325773784629488 1.618307217313679 1.3521498685229647 0.8326218729645899 1.2688465500668231 1.4179466125636655 1.1104298833573427 1.2911302139883236 1.0505276868504596 1.0691094767936669 1.0 10.063240550685439 -2.000000000000859 0.1383912001686505 0.9202282848865286 2.768787044484129 0.27886222066579724 0.18018879191092912 53.74265331641004 0.47545269188970496 0.4125427321539986 19.762138070252448 0.009999999999980224 2.000000000000859 1.8485587595976003 ILRLS(ph)TFEK ddPTM_A549_PD325901_60min_R1 2 ILRLSTFEK 9 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 ILRLS(0.851)T(0.149)FEK;ILRLS(0.951)T(0.049)FEK 57.836000000000006 0.0035275999999999997 28626000.0 1562.6399999999999 2020.8600000000001 2039.73 1411.55 2448.0 1914.6 2027.42 1950.2600000000002 2205.1 2157.97 1812.21 True False 1721.2780624452312 2191.1649644087865 2178.158343692905 1498.7382376373555 2276.060925141531 1899.0081323836073 2104.5745775467926 1911.3605343506274 2112.42731544181 2021.715405918536 1589.319658545688 1.083028233615566 1.3786810932759863 1.3704973269417906 0.9430061659268599 1.43209763555322 1.1948560015430127 1.3241984180027007 1.2026281334112634 1.3291393610362772 1.2720634235207995 1.0 10.634193606590925 -10.858907374805785 1.0202983203314202 0.9947029154557275 1.2586526415284336 0.0 0.15733638395927227 0.4915255370862874 0.8779256246168079 0.09653688669216184 0.021629444439007398 1.3838614938695146e-11 10.858907374805785 0.26394972607270606 ILS(ph)DVTHSAVFGVPASK ddPTM_A549_MK2206_60min_R1 1 ILSDVTHSAVFGVPASK 17 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 ILS(0.802)DVT(0.198)HSAVFGVPASK 109.5 2.1051999999999997e-09 83219000.0 717.03 789.59 559.23 465.59 966.45 593.06 568.53 822.45 1161.9 1022.8 1140.9 True False 838.0471342995957 829.7767583884297 638.5372230784884 579.6595709011292 824.286485248574 655.8172155586333 671.8245418284804 939.0348061474897 898.7315051730338 791.7487696345493 857.583042761864 0.9772198055603425 0.9675759862463189 0.7445777157883929 0.6759223795217819 0.9611739553454115 0.7647273591681107 0.783392987418286 1.0949782811974786 1.047981898381118 0.9232327718196315 1.0 9.74413256902513 -8.258979371805454 24.946632456587977 1.028715226092879 0.8360672273293499 0.4159234913136507 0.1006632893001653 140.6645728234656 1426462.3623978787 0.01572819436814368 0.019812280100701126 5.508338593861405e-09 8.258979371805454 -0.192647998763529 ILS(ph)DVTHSAVFGVPASK ddPTM_A549_PD325901_60min_R1 1 ILSDVTHSAVFGVPASK 17 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 ILS(0.785)DVT(0.2)HS(0.015)AVFGVPASK 72.568 0.00012107 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ILS(ph)PSMASK ddPTM_A549_MK2206_60min_R1 4 ILSPSMASK 9 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 ILS(0.915)PS(0.084)MAS(0.001)K;ILS(0.839)PS(0.16)MAS(0.001)K;ILS(0.9)PS(0.1)MASK;ILS(0.858)PS(0.134)MAS(0.008)K 95.48299999999999 0.00091844 23297700.0 8718.0 9418.9 10488.1 9794.2 13839.5 10186.2 8802.4 9664.3 13665.3 14038.3 14935.3 True False 10189.3852653639 9898.281778625338 11975.47028837775 12193.779439678348 11803.727883074791 11264.096922947676 10401.682139888866 11034.244120677467 10570.131368999966 10867.038279977216 11226.4528166897 0.9076228646519537 0.8816927252310856 1.0667189791751968 1.0861649390759103 1.051420967585317 1.0033531612231081 0.9265332790091367 0.9828789467919478 0.9415379498398622 0.9679850311954135 1.0 13.454614535946405 -7.608523649666035 24.99838273036651 0.9693190730609631 1.0035184183314676 0.07316218274536623 0.06096665239698414 59.39608216232838 17327.444046875586 0.010205245107264484 0.015136824957564781 2.463067707323557e-08 7.608523649666035 0.0341993452705045 ILS(ph)PSMASK ddPTM_A549_PD325901_60min_R1 5 ILSPSMASK 9 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 ILS(0.868)PS(0.132)MASK;ILS(0.95)PS(0.05)MASK;ILS(0.711)PS(0.283)MAS(0.006)K;ILS(0.49)PS(0.49)MAS(0.02)K;ILS(0.981)PS(0.018)MAS(0.001)K 102.95 0.00067094 68936100.0 21768.5 22268.399999999998 20638.2 21671.5 24239.800000000003 21982.5 22175.300000000003 21819.5 22151.3 22220.9 25652.000000000004 True False 23978.422094877275 24145.036218956604 22038.832359578446 23010.099335452484 22537.2800707703 21803.48180827465 23019.19317628978 21384.292955433397 21220.357894220746 20817.86858175749 22496.966621425767 1.0658513433558012 1.0732574140000386 0.9796357318052381 1.0228089734345793 1.0017919504448274 0.9691742969254062 1.0232131986348174 0.9505411691844412 0.9432541840556763 0.9253633581840706 1.0 14.457442868314068 -5.259427829629507 0.5548998661006943 0.9736501803056063 1.1479385365190653 0.5667701500094896 0.030216223324042307 2.082105799829611 0.42396632293809594 0.005417380890710596 0.23330024208031602 5.502653551401605e-06 5.259427829629507 0.17428835621345895 ILS(ph)SVRK ddPTM_A549_MK2206_60min_R1 1 ILSSVRK 7 1 J3QLN7;Q99741 J3QLN7 CDC6 Cell division control protein 6 homolog 1 ILS(0.901)S(0.099)VRK 50.607 0.021656 3794500.0 1163.8 1139.2 1248.7 1097.1 1333.3 1178.9 992.24 1012.2 1895.5 1664.8 1404.9 True False 1360.2209878218061 1197.1804140833838 1425.7844365611795 1365.88954925069 1137.1733362118293 1303.6504155095142 1172.5171642374041 1155.6824497324928 1466.1722764915094 1288.7205237461858 1056.0245567325298 1.288058103526018 1.13366721109934 1.3501432589529285 1.2934259345984533 1.0768436481537738 1.2344887315340178 1.1103124039703365 1.0943708101905478 1.3883884301213858 1.2203509052229295 1.0 10.044427668093604 -11.102771518954375 1.4480863431723088 1.0002710157570256 1.235052355722537 0.0 0.11963562737364038 0.35419647991817654 1.330312589240743 0.07956435004502228 0.017411256131344397 7.892752437878011e-12 11.102771518954375 0.23478133996551143 ILS(ph)SVRK ddPTM_A549_PD325901_60min_R1 1 ILSSVRK 7 1 J3QLN7;Q99741 J3QLN7 CDC6 Cell division control protein 6 homolog 1 ILS(0.887)S(0.113)VRK 40.001999999999995 0.050138 4672400.0 1238.0 1341.5 1558.1 1265.4 1497.1 1393.3 1537.0 1857.7 1574.1 1699.0 1352.1 True False 1363.680848632568 1454.55291299466 1663.842035616437 1343.5608840680875 1391.948860714618 1381.9534267471429 1595.4913760786724 1820.6467161625437 1507.9460510802014 1591.7248500468454 1185.8002716680874 1.150008885319492 1.2266424184137799 1.4031385178179117 1.1330414709536838 1.1738476486909026 1.1654183758982641 1.3454975632905404 1.5353738396445178 1.2716695105483031 1.342321205414919 1.0 10.211645317025427 -10.495187106691564 0.9855699086250183 1.0111302607637067 1.2669293398892052 0.0 0.15240138344539844 0.40869972847739955 0.7523683252289116 0.06580627935319175 0.022436934732814832 3.197517229494872e-11 10.495187106691564 0.2557990791254985 ILSEVTPDQS(ph)KPEN ddPTM_A549_PD325901_60min_R1 2 ILSEVTPDQSKPEN 14 1 O43482 O43482 OIP5 Protein Mis18-beta 1 ILSEVTPDQS(1)KPEN;ILSEVTPDQS(1)KPEN 150.11 1.6455999999999998e-13 3398800.0 3679.8 3146.1 3823.7 4256.2 4021.5 3651.1 4276.8 4498.9 3811.6 4690.3 4505.5 True False 4053.3705870744147 3411.232888238911 4083.1992757759926 4519.095807468466 3739.0437134218405 3621.3666521183454 4439.555964354757 4409.1659101812265 3651.411707196049 4394.153657548397 3951.352062717677 1.0258186369469116 0.8633077574699125 1.0333676197325816 1.1436834115865402 0.9462694424779212 0.9164879754166039 1.1235536327535696 1.1158625807563884 0.9240917157568252 1.112063310938223 1.0 11.948130679828235 ILSGVVTK ddPTM_A549_MK2206_60min_R1 2 ILSGVVTK 8 0 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ; 114.89 0.0036479999999999998 6577600.0 3956.7 3975.7 3815.6000000000004 3683.9 5074.5 3913.8999999999996 4100.8 3448.5 5631.2 5934.9 6060.6 False True 4624.494227972622 4178.046148412313 4356.709454747208 4586.455665376557 4328.0477721495035 4328.066300163447 4845.862278385013 3937.335435588325 4355.742191178573 4594.201968032938 4555.585755949299 1.0151261496797275 0.9171260014052105 0.956344515973084 1.0067762766592514 0.9500529688190711 0.9500570359171208 1.063718814217608 0.8642874147295813 0.9561321912314474 1.0084766732869004 1.0 12.153420851943341 -10.71540056192092 1.1492232301324807 0.9986095511972554 0.9631839654335241 0.08326379319152843 0.049724418429747355 1.0117518935864052 2.5067776743539634 0.02594017206706225 0.007902328637477404 1.925747922780166e-11 10.71540056192092 -0.03542558576373123 ILSGVVTK ddPTM_A549_PD325901_60min_R1 2 ILSGVVTK 8 0 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ; 101.64 0.0063143999999999995 15477600.0 4310.6 4226.8 4540.1 4676.3 5319.1 5302.2 4295.6 5241.200000000001 5360.799999999999 5002.0 5345.1 False True 4748.208938704001 4583.007269955888 4848.218487839157 4965.144430352144 4945.5047658988215 5259.020641138809 4459.071408642515 5136.660154358142 5135.50421868417 4686.172866353341 4687.686585380591 1.0129109214579661 0.9776693015801942 1.0342454427220484 1.0591886509300463 1.0549990226143282 1.1218797471528978 0.9512307035519281 1.0957772156478542 1.0955306258528845 0.999677086127735 1.0 12.194660400319774 -5.918671561371178 5.119872112338919 1.0497867002293895 0.9959014589306707 0.14630780779632568 0.04754427307948307 0.28255144622376765 12.869589818406636 0.006765786070510376 0.02195006251962068 1.2059476029928432e-06 5.918671561371178 -0.053885241298718745 ILSLSEEGS(ph)LER ddPTM_A549_MK2206_60min_R1 2 ILSLSEEGSLER 12 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 ILSLS(0.001)EEGS(0.999)LER;ILSLS(0.001)EEGS(0.999)LER 73.46600000000001 0.0014079000000000001 3006000.0 1389.23 1784.02 1568.8600000000001 1883.6 2165.66 2076.09 1496.59 1744.0 2315.2 2730.8 2478.2 True False 1623.6980605874605 1874.81899783448 1791.3479387710186 2345.0820845580183 1847.0942828324548 2295.7804658029922 1768.5010308252608 1991.2173407760017 1790.810896614688 2113.910383377032 1862.7945451594803 0.8716463470470653 1.0064550611371745 0.9616454715448263 1.2589053852727745 0.9915716618519079 1.2324389030280538 0.9493806149587223 1.0689409339050469 0.961357172355994 1.1348059767890573 1.0 10.863252847280352 -8.762021782849656 24.99887730738612 0.9817519967458768 1.0474450091569303 0.0 0.11918668852286328 32.68998077864056 1403153.7277707478 0.01792200587960589 0.019643170698731723 1.7297295992254916e-09 8.762021782849656 0.06569301241105352 ILSLSEEGS(ph)LER ddPTM_A549_PD325901_60min_R1 1 ILSLSEEGSLER 12 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 ILSLSEEGS(1)LER 94.12200000000001 0.00026262 1805300.0 1624.8 1510.5 1307.8 1202.9 1389.0 1469.4 1536.4 1343.9 1686.0 1564.9 1632.8 True False 1789.7484998854593 1637.7951361002101 1396.5551724402658 1277.200401015887 1291.4414317898634 1457.4336935780168 1594.868542750339 1317.0948602308445 1615.143283222935 1466.0919469324945 1431.9759511719947 1.2498453611742901 1.1437308948937053 0.9752644039149269 0.8919147000831738 0.9018597209910464 1.0177780516391957 1.1137537201270913 0.9197744271842511 1.1279122962232906 1.0238244194901303 1.0 10.483791548621632 -5.53625025468032 3.874395950769858 1.027005434367501 1.2349074981320856 0.48022540090772514 0.07821701561386368 0.1673639276284648 5.4118220326970725 0.01250994873653559 0.06721778380099246 2.9090403508437736e-06 5.53625025468032 0.20790206376458453 ILSQS(ph)TDSLNMR ddPTM_A549_MK2206_60min_R1 2 ILSQSTDSLNMR 12 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ILS(0.005)QS(0.874)T(0.118)DS(0.003)LNMR;ILS(0.02)QS(0.84)T(0.14)DS(0.001)LNMR 101.43 8.0592e-05 33435000.0 8168.799999999999 8914.3 8837.0 7917.0 12385.599999999999 10201.2 9745.6 8435.3 14038.4 12491.4 13572.3 True False 9547.493732014753 9367.999793946205 10090.219480973125 9856.66535540764 10563.694647105101 11280.684212991478 11516.249370910307 9631.029607022823 10858.724814718234 9669.584064345927 10201.923333575995 0.9358523309612199 0.9182582036384034 0.9890507065236183 0.9661575600130163 1.0354610892181935 1.105740931797157 1.1288312011724964 0.9440405786353757 1.064380162413161 0.9478197147906353 1.0 13.316553543730082 -6.404314632947471 1.6179409413526644 1.0376638497308825 0.9352003444911818 0.3156376838159972 0.056318933656815624 0.3104180660780083 1.555997709433465 0.007721990456018125 0.025171634413057295 3.9417163342655693e-07 6.404314632947471 -0.10246350523970071 ILSQS(ph)TDSLNMR ddPTM_A549_PD325901_60min_R1 2 ILSQSTDSLNMR 12 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ILS(0.017)QS(0.83)T(0.132)DS(0.021)LNMR;ILS(0.024)QS(0.805)T(0.153)DS(0.019)LNMR 93.859 9.345100000000001e-05 36161000.0 14011.5 13782.2 14935.2 14665.3 18129.1 15287.7 14532.2 16969.1 15117.199999999999 18270.4 19538.1 True False 15433.937165278874 14943.674362635113 15948.792484653495 15571.142273687166 16855.774557999728 15163.202039820775 15085.230823324979 16630.637988498565 14481.876655479085 17116.80382595402 17135.03756222044 0.900723859474217 0.8721121449761584 0.9307707921118075 0.9087311432581058 0.9837022239836558 0.8849237700682259 0.8803733734780422 0.9705632641953478 0.8451616521348585 0.9989358799944142 1.0 14.064661733984288 -11.068274120961208 1.3848134312218854 0.999956849468315 0.9026173665332783 0.4346488962406494 0.03944266722726182 0.33013398982754905 1.1306870735122354 0.029679319447216006 0.006573972234849098 8.545271763211838e-12 11.068274120961208 -0.09733948293503669 ILSS(ph)VRK ddPTM_A549_PD325901_60min_R1 1 ILSSVRK 7 1 J3QLN7;Q99741 J3QLN7 CDC6 Cell division control protein 6 homolog 1 ILS(0.435)S(0.565)VRK 49.418 0.022864 5569600.0 1341.3 1409.3 1662.7 1648.9 1965.5 1781.8 1593.6 1771.5 2219.3 1911.6 1636.0 True False 1477.467788587128 1528.0666569387804 1775.5408206273348 1750.7488080763947 1827.4500606068948 1767.2896115539068 1654.2453200513798 1736.166042785134 2126.0305388236416 1790.9012497643025 1434.7823714584663 1.0297504471603396 1.065016330933513 1.237498352326761 1.2202190679947833 1.2736775255673647 1.2317475086883347 1.152959050068219 1.2100553208082068 1.4817791054001568 1.2482041077378438 1.0 10.486616209418024 -5.719942340049395 4.901835274211658 1.2291512178883537 1.040202319971069 0.3008450931013219 0.10674556424101041 0.27122561471653284 14.578169040424607 0.022638163321942482 0.09006915635710959 1.9057137169518332e-06 5.719942340049395 -0.18894889791728464 ILTINEDGS(ph)LGLKTPK ddPTM_A549_MK2206_60min_R1 1 ILTINEDGSLGLKTPK 16 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 ILTINEDGS(0.548)LGLKT(0.452)PK 58.577 0.0018635000000000001 1156500.0 726.27 928.41 852.43 957.24 1211.3 798.94 1007.6 1173.3 1479.2 1217.8 1349.9 True False 848.8466204032846 975.6621034402694 973.3173918938459 1191.763842972136 1033.1193745994074 883.4833005065493 1190.6678774143436 1339.618868080551 1144.1635617970148 942.6981342011675 1014.6825746553075 0.8365637112588061 0.9615441595335433 0.9592333762354068 1.1745188818059518 1.01817001730848 0.8706991945798151 1.1734387749970174 1.3202344275357503 1.1276073822256114 0.9290571827562984 1.0 9.986812761241406 -7.770845004015669 24.99956277048571 1.0931406052702275 0.9807115598454719 0.2345088921242433 0.1233916118370965 289.1948461575228 768660.7800445796 0.019870888533162125 0.02765154230791034 1.694942603027863e-08 7.770845004015669 -0.11242904542475562 ILTINEDGS(ph)LGLKTPK ddPTM_A549_PD325901_60min_R1 1 ILTINEDGSLGLKTPK 16 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 ILT(0.001)INEDGS(0.66)LGLKT(0.339)PK 53.778999999999996 0.0042194 2081600.0 1744.5 1564.8 1866.9 1644.3 2298.6 1763.7 1686.3 1826.5 2198.0 1882.0 2044.5 True False 1921.6003557669758 1696.6711876660777 1993.599060581687 1745.8646765237534 2137.1542657395116 1749.3370119528715 1750.4730692787664 1790.0690246384681 2105.6257037508967 1763.1701988158702 1793.039461153322 1.071699980618921 0.9462542372462577 1.1118545373783133 0.9736900466210461 1.1919170280640938 0.9756266104861183 0.9762602035277149 0.9983433512874595 1.174333164088041 0.9833415476989897 1.0 10.808191524002641 ILTINEDGSLGLKT(ph)PK ddPTM_A549_PD325901_60min_R1 1 ILTINEDGSLGLKTPK 16 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 ILTINEDGS(0.061)LGLKT(0.939)PK 89.859 4.3814e-06 3945800.0 2093.5 1847.0 2081.0 2293.8 2611.8 2282.1 1955.1 2260.7 2312.6 2428.5 2467.2 True False 2306.0305788467563 2002.6531720470648 2222.229174069577 2435.48281640223 2428.356178220855 2263.515334227843 2029.5024003717695 2215.60856501516 2215.4094642831305 2275.164095549598 2163.7500408693923 1.0657564576729925 0.9255473757229375 1.0270267508240867 1.125584180427632 1.122290529106192 1.0461075870475156 0.9379560309823577 1.0239669662235713 1.023874949711373 1.0514911854769693 1.0 11.079318131503946 -7.554994381174788 24.999109037917837 1.0070336629970567 1.0522586807578642 0.13656166388920576 0.05602248934826843 314.1739984769975 244554.98910817355 0.00874582882223818 0.012972195863123063 2.7861572152059686e-08 7.554994381174788 0.04522501776080756 IMAT(ph)PEQVGK ddPTM_A549_MK2206_60min_R1 4 IMATPEQVGK 10 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 IMAT(1)PEQVGK;IMAT(1)PEQVGK;IMAT(1)PEQVGK;IMAT(1)PEQVGK 131.43 1.1768000000000001e-06 38634200.0 12820.699999999999 14070.700000000003 14238.7 13567.7 19587.4 15138.899999999998 13273.8 13956.8 20724.2 18808.2 20337.3 True False 14984.520723979227 14786.838529181074 16257.961765727283 16891.787109077188 16706.119407271883 16740.888349611494 15685.477641149771 15935.219140907398 16030.201789746952 14559.414557137792 15286.987129074294 0.9802141257436001 0.9672827225096573 1.0635164161815962 1.1049781730338954 1.0928326992242012 1.0951071135378945 1.0260673021250597 1.042404170708055 1.048617471474097 0.9524057575378779 1.0 13.900016477402493 -5.753504270886643 24.84314683916919 1.0418536931606355 0.9737483893254874 0.3002199732462596 0.042661778196653954 157.50970402607655 493115.32527103496 0.005710903105634157 0.021346578041509565 1.7639884171880466e-06 5.753504270886643 -0.06810530383514812 IMAT(ph)PEQVGK ddPTM_A549_PD325901_60min_R1 4 IMATPEQVGK 10 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 IMAT(1)PEQVGK;IMAT(1)PEQVGK;IMAT(1)PEQVGK;IMAT(1)PEQVGK 128.08 1.5883000000000001e-06 92459000.0 27105.3 28874.9 27926.7 30311.1 33578.5 30605.6 28952.8 31507.100000000002 31035.4 29355.5 34777.5 True False 29857.01010213276 31308.289159470354 29821.973798889387 32183.34780549725 31220.061999536327 30356.358140854325 30054.614647580092 30878.666173658203 29731.090066510707 27501.988720159014 30500.087972736434 0.978915540467342 1.0264983231345548 0.9777668125267965 1.0551886877921617 1.023605637709749 0.9952875600880041 0.9853943593357979 1.0124123642285943 0.9747870266173291 0.9017019473761068 1.0 14.89652578345932 -8.745171274948934 24.974304044950486 0.9880938727350302 1.0076316427611047 0.15894276216975067 0.03443232793394673 359.9953311719719 552653.1964181354 0.0038379269320014944 0.00434507658063016 1.7981616250245902e-09 8.745171274948934 0.019537770026074486 IMEET(ph)SGMEEEEEEESIAAVPGR ddPTM_A549_PD325901_60min_R1 1 IMEETSGMEEEEEEESIAAVPGR 23 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 IMEET(0.477)S(0.477)GMEEEEEEES(0.046)IAAVPGR 47.236999999999995 0.0033085000000000002 864680.0 206.56 0.0 170.04 117.44 292.64 147.3 0.0 270.36 264.55 338.38 210.03 True False 227.52981913856493 0.0 181.57993693358523 124.69400207440827 272.0859759531936 146.10043763715933 0.0 264.9674577066829 253.43188349740646 317.01462905170797 184.19764148986644 1.2352482762439843 0.0 0.98578860980462 0.6769576475889256 1.477141475604411 0.793172140834371 0.0 1.4384953876907267 1.3758693186706676 1.721056939098476 1.0 7.525110778713977 IMEET(ph)SGMEEEEEEESIAAVPGRR ddPTM_A549_MK2206_60min_R1 1 IMEETSGMEEEEEEESIAAVPGRR 24 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 IMEET(0.5)S(0.5)GMEEEEEEESIAAVPGRR 46.982 0.0017235 2045500.0 366.7 400.43 279.35 383.2 503.76 220.06 371.06 295.65 628.11 569.78 916.09 True False 428.5899950457606 420.81017662518394 318.9660305544689 477.0840172025018 429.6575713268366 243.34660313599426 438.4767989215629 337.5592928901519 485.8440878855618 441.06630227060384 688.599570202223 0.6224081651980923 0.6111101354617509 0.46320974388757924 0.6928322901252976 0.6239585238205388 0.3533934868192409 0.6367660072642713 0.49021130348806324 0.70555386455278 0.640526543083776 1.0 9.42752147020722 -9.799132931056283 0.6965940121383873 0.9800578355535707 0.5592536829671431 0.2161895549446674 0.13878118959938882 0.23254024219104727 0.23630629360151656 0.04478748739656279 0.021791315562841026 1.5880605925636183e-10 9.799132931056283 -0.42080415258642767 IMFVDPSLTVR ddPTM_A549_MK2206_60min_R1 1 IMFVDPSLTVR 11 0 O95994;B5MC07;H7C3Z9;H7C040;B5MC62;Q8TD06 O95994 AGR2;AGR3 Anterior gradient protein 2 homolog;Anterior gradient protein 3 homolog 0 82.75 0.00040578 4324400.0 1917.8 2086.1 1614.3 1888.3 2646.2 2121.2 2341.5 1900.4 2796.6 2640.5 2948.9 False True 2241.477754291683 2192.2735795464782 1843.2320140471784 2350.9335847690086 2256.9474853999427 2345.6639760613975 2766.9202411330743 2169.7875197309118 2163.174565252521 2044.0092160931047 2216.6067445003614 1.0112203077307373 0.9890223355973015 0.8315557184964967 1.0606002127359426 1.0181993224552217 1.058222881384459 1.248268439134772 0.9788779742344405 0.9758946058517546 0.9221343484425057 1.0 11.114137124292805 -4.911471561274114 10.334793470158797 1.0047924764759668 1.063864085935209 0.0 0.09725844428893304 1202900.3491393882 4964773.550240542 0.01274145464353548 1454253.9835153907 1.2261071887190106e-05 4.911471561274114 0.05907160945924228 IMFVDPSLTVR ddPTM_A549_PD325901_60min_R1 2 IMFVDPSLTVR 11 0 O95994;B5MC07;H7C3Z9;H7C040;B5MC62;Q8TD06 O95994 AGR2;AGR3 Anterior gradient protein 2 homolog;Anterior gradient protein 3 homolog 0 ; 87.639 0.00018632 12644300.0 4454.4 3836.3 4769.0 4718.6 4922.3 4872.9 4392.799999999999 5115.3 5232.299999999999 5443.7 5179.3 False True 4906.607408844033 4159.598464496023 5092.653018326674 5010.0572052818725 4576.574629013138 4833.2167180048455 4559.970407832394 5013.271328624778 5012.40462681338 5099.983852972344 4542.278934287798 1.0802083006849423 0.9157514376972586 1.1211669498947607 1.1029831672077663 1.0075503277587063 1.0640510606957398 1.0038948452529084 1.1036907686979882 1.1034999609946443 1.1227808610507517 1.0 12.149200587086805 IMGPNYT(ph)PGKK ddPTM_A549_MK2206_60min_R1 3 IMGPNYTPGKK 11 1 P13639 P13639 EEF2 Elongation factor 2 1 IMGPNY(0.003)T(0.997)PGKK;IMGPNYT(1)PGKK;IMGPNY(0.002)T(0.998)PGKK 100.55 0.00016374 71446000.0 8697.5 9382.1 10042.1 9037.1 12232.8 9370.400000000001 9420.300000000001 8946.3 12203.3 12044.500000000002 12446.300000000001 True False 10165.425366540776 9859.608815810847 11466.220781926018 11251.189905690835 10433.37132469217 10361.96950843189 11131.846571661716 10214.465421894687 9439.272034665706 9323.63908473146 9355.540209595054 1.0865674390576723 1.0538791555509344 1.2256075571313614 1.2026232214951735 1.115207790352041 1.1075757547174712 1.189866787194702 1.0918092587981951 1.0089499722297999 0.9965901354546179 1.0 13.191605244937604 -8.644212344325771 3.307729490400169 1.003760327540489 1.1405385872640892 0.6067938231389643 0.04856848993405671 0.11952011687000696 2.5794864052561226 0.008655807518782086 0.009778895950068955 2.268755293444043e-09 8.644212344325771 0.13677825972360025 IMGPNYT(ph)PGKK ddPTM_A549_PD325901_60min_R1 4 IMGPNYTPGKK 11 1 P13639 P13639 EEF2 Elongation factor 2 1 IMGPNYT(1)PGKK;IMGPNYT(1)PGKK;IMGPNY(0.011)T(0.989)PGKK;IMGPNY(0.003)T(0.997)PGKK 89.01299999999999 0.00018717 147847000.0 13998.0 14424.3 14409.7 15529.0 19118.300000000003 16152.999999999998 16603.6 16821.0 17074.4 15683.7 15886.3 True False 15419.066655217035 15639.886383085248 15387.62889456529 16488.19106108214 17775.49656255447 16021.455323510087 17235.45908383853 16485.491959180777 16356.822345825429 14693.428505403019 13932.385811552953 1.106706838568259 1.1225562222169019 1.1044503865092243 1.1834434736518618 1.2758401039838236 1.1499434153068633 1.2370787973404107 1.183249745030083 1.1740144557482821 1.0546240036806185 1.0 13.766154708828997 -10.546663186362036 0.8029455123520358 0.997509086242363 1.1726397070299968 0.5229059714898128 0.05194453096626837 0.3621550672690827 0.41005285829816307 0.03820511011738679 0.010157987382616042 2.8401208076922132e-11 10.546663186362036 0.17513062078763375 IMGPNYTPGK ddPTM_A549_PD325901_60min_R1 1 IMGPNYTPGK 10 0 P13639 P13639 EEF2 Elongation factor 2 0 48.794 0.018481 2475000.0 2604.7 2144.2 2774.4 3232.3 3676.4 2574.0 3095.7 2723.3 3114.4 3497.0 3698.3 False True 2869.127226521204 2324.899259070554 2962.687467822505 3431.951829914085 3418.182346891472 2553.038197406979 3213.5085575320386 2668.9816451124793 2983.5125986177386 3276.1988231982455 3243.432545455283 0.8845959292544691 0.7168020997779703 0.9134419866304418 1.0581233868183744 1.0538780440126772 0.7871408335543502 0.9907739755632735 0.8228879767677834 0.9198626938606305 1.0101023459818441 1.0 11.663305719671015 -2.000000704465262 0.017601892781970958 1.643964438206242 6.90301757182837e-11 0.13502492703269176 0.09956541679467712 5068.559354611158 6.693862491069298 238.74794227317 407.7282037475034 0.009999983779101045 2.000000704465262 -1.6439644381372118 IMNTFSVVPSPK ddPTM_A549_MK2206_60min_R1 2 IMNTFSVVPSPK 12 0 A0A0B4J269;Q13509;Q13509-2;G3V2A3;M0R2D3;M0R042;M0QYM7;Q5JP53;P07437;Q5ST81;P68371;P04350 A0A0B4J269;Q5JP53;P68371 TUBB3;TUBB4A;TUBB;TUBB4B Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain 0 ; 103.91 0.00011361 5544900.0 5640.1 5982.4 6071.799999999999 5849.3 7687.1 5159.6 5863.3 5947.1 9347.7 8247.0 9307.3 False True 6592.010992794099 6286.878607103614 6932.872540972345 7282.378762585056 6556.337773039796 5705.585447334712 6928.585714215488 6790.119637229908 7230.460875209545 6383.996972209752 6996.0405415877785 0.9422488268339876 0.8986338157607049 0.9909708927156821 1.0409286108757014 0.9371497683676673 0.8155449376569517 0.990358142299018 0.9705660790365952 1.0335075722086315 0.9125157200362477 1.0 12.772322934267303 -8.38361395993442 2.354959151408728 1.015269575426693 0.9426581871645999 0.0 0.06291654743212392 0.31906510961465395 3.461105903870372 0.009785732844079109 0.012027118091052382 4.134148190537001e-09 8.38361395993442 -0.07261138826209301 IMNTFSVVPSPK ddPTM_A549_PD325901_60min_R1 2 IMNTFSVVPSPK 12 0 A0A0B4J269;Q13509;Q13509-2;G3V2A3;M0R2D3;M0R042;M0QYM7;Q5JP53;P07437;Q5ST81;P68371;P04350 A0A0B4J269;Q5JP53;P68371 TUBB3;TUBB4A;TUBB;TUBB4B Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain 0 ; 130.56 4.3467e-08 11208000.0 9294.8 9328.9 10101.0 10049.400000000001 12303.1 11926.7 11228.0 11986.7 11767.7 11223.8 10832.4 False True 10238.401253529893 10115.079142777397 10786.514602247373 10670.128614156662 11438.972699390837 11829.572909484788 11655.287684197358 11747.615865115762 11273.144492279087 10515.127352534306 9500.083472241246 1.07771697832403 1.0647358175676178 1.1354126133486104 1.1231615643519584 1.2040918095946131 1.2452072599204198 1.226861607927289 1.236580278419836 1.1866363622191989 1.106845785435356 1.0 13.213724474364561 -10.64784926327458 0.9670055854862778 1.0020784021378017 1.168286022421321 0.2600851116114371 0.06579670729032162 0.382779849641831 0.6492358739466073 0.04246985379397617 0.011962113494440475 2.2498353524970847e-11 10.64784926327458 0.1662076202835192 IMNVIGEPIDER ddPTM_A549_MK2206_60min_R1 2 IMNVIGEPIDER 12 0 H0YH81;P06576;F8W079 H0YH81 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial 0 ; 104.52 0.00049124 2108100.0 1902.77 1924.43 1947.59 1562.72 2611.3 1890.1399999999999 1611.51 1566.77 2980.5 2962.6 2628.1000000000004 False True 2223.9110577399024 2022.3752670948809 2223.7875476913496 1945.5864701531677 2227.1812291681936 2090.153360226612 1904.3005072766864 1788.864445531889 2305.4215088804767 2293.346602384941 1975.4702381299455 1.1257628765114378 1.0237437284852935 1.1257003546641484 0.9848725800065371 1.12741826537287 1.0580535813109642 0.9639732710321006 0.9055385452049611 1.1670241668955113 1.1609117455274391 1.0 10.947980395910207 -3.833064385753576 15.531880132714907 1.0608975997588541 1.0630108254437958 0.0 0.08447977646027216 0.0 0.0 0.011326329395108846 0.0 0.0001468708520064947 3.833064385753576 0.0021132256849416553 IMPDSNDS(ph)PPAEREPGEVVDSLVGK ddPTM_A549_MK2206_60min_R1 2 IMPDSNDSPPAEREPGEVVDSLVGK 25 1 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IMPDS(0.187)NDS(0.813)PPAEREPGEVVDSLVGK;IMPDS(0.106)NDS(0.893)PPAEREPGEVVDSLVGK 76.16199999999999 1.6398e-06 8467300.0 1299.52 1494.53 1630.65 1295.1 2164.3 1934.5700000000002 1858.98 2366.5 2574.3999999999996 2568.9 2671.8 True False 1518.8472057863846 1570.5951933462425 1861.9006899002864 1612.399558139249 1845.9343370308727 2139.284913336366 2196.7326029731225 2701.958622102297 1991.3025104720355 1988.5837058214654 2008.318322071302 0.756278120402698 0.7820449458063955 0.927094410003686 0.8028605527416004 0.9191442993594 1.0652120681396713 1.0938169406867222 1.3453836438217628 0.991527333385219 0.9901735616147329 1.0 10.971772241837442 -7.025276570434676 3.220641442235285 1.0372683460304495 0.8228828335956223 0.5631136882371377 0.10553870538340726 0.1861971487538245 3.9580040428021026 0.017109818959057495 0.032351988370396 9.434598642586203e-08 7.025276570434676 -0.21438551243482717 IMPDSNDS(ph)PPAEREPGEVVDSLVGK ddPTM_A549_PD325901_60min_R1 2 IMPDSNDSPPAEREPGEVVDSLVGK 25 1 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IMPDS(0.043)NDS(0.957)PPAEREPGEVVDSLVGK;IMPDS(0.183)NDS(0.817)PPAEREPGEVVDSLVGK 107.45 1.4025e-12 14607100.0 2642.6000000000004 2961.8999999999996 2815.8 2909.1000000000004 3345.1 3077.8 3251.7 3364.1000000000004 3353.5 3408.8 3619.0 True False 2910.874806620699 3211.509707788952 3006.89712078093 3088.788499954538 3110.1517159685204 3052.735417241339 3375.445222898514 3297.0003864146047 3212.564057110387 3193.5677862505518 3173.8859427311677 0.9171327700943959 1.0118541641812775 0.9473866342510904 0.9731882479987916 0.9799191817498636 0.9618289605625912 1.063505520930567 1.0387898134667988 1.0121863592697147 1.0062011817294378 1.0 11.632034568848814 -7.675060164014373 24.999950074250812 1.0128474838975372 0.9675576139518476 0.5063070749788303 0.027925287383332463 18.18169991484669 5259.210011273422 0.004169161062839881 0.00618386401793715 2.1131962726405627e-08 7.675060164014373 -0.04528986994568962 IMS(ph)SPLSK ddPTM_A549_MK2206_60min_R1 1 IMSSPLSK 8 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 1 IMS(0.917)S(0.083)PLSK 86.67 0.00097542 4798600.0 2390.4 2617.8 2309.9 2911.2 3738.5 2995.6 2767.9 2626.8 4218.1 4159.1 3952.2 True False 2793.841080331022 2751.034838472158 2637.4785537059893 3624.4441306887334 3188.571602361003 3312.5924036816546 3270.7916017220755 2999.1569442376153 3262.707084921572 3219.556421379601 2970.7596648290296 0.9404466855422351 0.9260374950696265 0.8878128328357316 1.2200394981791043 1.0733185993167538 1.1150657668136537 1.1009950217263076 1.0095589285611968 1.0982736582662416 1.0837485305513228 1.0 11.53661618018068 -6.2175648099192085 24.99968595230761 1.0647285777982525 0.9188927949494413 0.6047038568477658 0.05896569345027191 288.7447525963684 164526.11565192215 0.008884087896781996 0.023504987926775578 6.059477679797649e-07 6.2175648099192085 -0.14583578284881116 IMS(ph)SPLSK ddPTM_A549_PD325901_60min_R1 3 IMSSPLSK 8 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 1 IMS(0.619)S(0.381)PLSK;IMS(0.607)S(0.393)PLSK;IMS(0.625)S(0.374)PLS(0.001)K 79.986 0.001417 40613300.0 9990.5 10627.3 10606.800000000001 10956.3 12025.600000000002 11621.400000000001 11087.8 13287.0 12381.1 12517.0 13984.400000000001 True False 11004.728205382622 11522.899867512586 11326.64123186987 11633.045767437317 11180.96334206781 11526.759171462894 11509.752296476965 13021.980361550146 11860.765423435045 11726.674483835417 12264.407454415506 0.8972898402377062 0.9395398766993869 0.9235375841816136 0.9485208160830565 0.9116594816036033 0.9398545518245124 0.9384678664058209 1.0617700373989036 0.9670883381459134 0.9561549979011427 1.0 13.582189912407301 -8.028560112980935 24.99640554447119 0.9903128148443568 0.9284494340307079 0.569128133592543 0.02834686619278835 388.57929766806717 340091.8319498329 0.004203237097036322 0.005432187303790785 9.363536053022874e-09 8.028560112980935 -0.06186338081364895 IMSS(ph)IGEGIDFSQER ddPTM_A549_PD325901_60min_R1 2 IMSSIGEGIDFSQER 15 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 IMS(0.016)S(0.984)IGEGIDFSQER;IMS(0.125)S(0.874)IGEGIDFS(0.001)QER 120.53 5.7827e-07 2979700.0 1504.0900000000001 1864.9 1717.15 2329.0 1645.2 2531.0 1946.1299999999999 2885.3999999999996 1905.51 2010.05 2171.2 True False 1656.7841095474646 2022.0616678671201 1833.6861250617835 2472.857040457229 1529.646827631883 2510.3883751503763 2020.1910421131993 2827.848433447489 1825.4280412895225 1883.135099962722 1904.1561643707944 0.8700883575349657 1.0619200807698912 0.9629914601398795 1.2986629388532085 0.8033200512928185 1.318373157686835 1.0609376898353016 1.485092707394573 0.9586545869743375 0.9889604304513446 1.0 10.894936087007766 IMSS(ph)PLSK ddPTM_A549_MK2206_60min_R1 2 IMSSPLSK 8 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 1 IMS(0.117)S(0.883)PLSK;IMS(0.164)S(0.833)PLS(0.003)K 65.347 0.0031916 8065000.0 4110.9 5376.1 5388.9 4720.4 7056.200000000001 6013.4 5059.0 4794.799999999999 7870.5 8098.2 8134.7 True False 4804.7194181445775 5649.720526820298 6153.127052282004 5876.898211906811 6018.242327291619 6649.7339966281415 5978.154815243313 5474.477583459155 6087.8443166058705 6268.810995555837 6114.629483701406 0.7857744170683761 0.9239677631947567 1.0062959773250717 0.9611209031670245 0.9842366317261403 1.087512172953907 0.9776806315375499 0.8953081454978457 0.9956194946616257 1.0252151847083135 1.0 12.578049365880567 -5.311917314750526 2.1525298989335093 0.992913115783198 0.7426486275281527 0.6539901214699082 0.044033597036699464 0.2562420001233509 1.4341012086668528 0.005905171575532357 0.11775197030669561 4.876213194028473e-06 5.311917314750526 -0.2502644882550452 IMSS(ph)PLSK ddPTM_A549_PD325901_60min_R1 2 IMSSPLSK 8 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 1 IMS(0.225)S(0.774)PLSK;IMS(0.159)S(0.839)PLS(0.002)K 56.431999999999995 0.0066698999999999994 7381600.0 6083.9 6153.6 6937.700000000001 7293.2 7974.1 6941.2 6852.3 7199.5 7222.1 6516.9 7877.599999999999 True False 6701.533049269538 6672.185468061075 7408.534041779196 7743.684399941029 7414.026725151586 6884.673168547522 7113.068026222439 7055.900324601507 6918.580252529272 6105.421821818891 6908.70514022079 0.9700128914541242 0.9657649780444739 1.0723476963358192 1.1208590094342274 1.0731427343727462 0.9965214940881817 1.0295804903891321 1.0213057557665595 1.0014293723799257 0.8837288171808954 1.0 12.754199624387955 -8.299610273764976 1.1833281900298283 1.0003386731048458 1.0378947250152146 0.15192966624368265 0.05586154605798683 0.7787057824135715 2.1219876285576675 0.009000139009888714 0.011610593749068558 5.016371897940991e-09 8.299610273764976 0.037556051910368815 IMVGS(ph)TDDPSVFSLPDSK ddPTM_A549_PD325901_60min_R1 2 IMVGSTDDPSVFSLPDSK 18 0 O43741 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 IMVGS(0.879)T(0.121)DDPSVFSLPDSK;IMVGS(0.858)T(0.137)DDPS(0.005)VFSLPDSK 92.575 1.6165000000000001e-06 5386800.0 2267.7 2405.5 1945.3400000000001 1976.8200000000002 2745.8 2175.8 2650.1 2619.2 2493.27 3019.8 2849.2 True False 2497.9152346074925 2608.2199271029835 2077.362470679727 2098.92368171604 2552.9444804957598 2158.081006184192 2750.9510056903637 2566.958001277349 2388.4865324799794 2829.129312637707 2498.7664625669086 0.9996593407298489 1.043802998869945 0.8313551913713914 0.8399839333364023 1.0216819053482877 0.8636585445313123 1.1009236144719157 1.027290080818673 0.9558662517129984 1.1322103746067675 1.0 11.287000356538604 IMVHS(ph)PTKPASYSVK ddPTM_A549_PD325901_60min_R1 1 IMVHSPTKPASYSVK 15 1 A0A590UK32;A0A590UJW2;A0A590UJD8;Q5VVJ2 A0A590UK32 MYSM1 Histone H2A deubiquitinase MYSM1 1 IMVHS(0.992)PT(0.008)KPASYSVK 82.90799999999999 7.8503e-05 8885100.0 2769.0 2407.4 2970.4 2796.6 3876.0 3401.1 2974.4 2959.1 3314.2 3271.8 3705.8 True False 3050.1068415699374 2610.280046771034 3171.989206466252 2969.339630460576 3603.7631314740897 3373.40256923111 3087.592419654134 2900.0784291309574 3174.915699440955 3065.2179896311186 3250.0100930016993 0.9384914982688156 0.8031605970676194 0.9759936479263709 0.9136401258736101 1.1088467507329078 1.037966797855525 0.9500254864754722 0.8923290531853253 0.9768941045067995 0.9431410678482209 1.0 11.666228483141914 -5.860983253757252 7.899101889777935 0.9856818198484237 0.8713661508922659 0.2903397816550157 0.06350655834812144 0.17909706210585097 12.421678168916344 0.008331779112836618 0.026159645029265027 1.3772625746314134e-06 5.860983253757252 -0.11431566895615786 INENEKS(ph)PSQNR ddPTM_A549_MK2206_60min_R1 3 INENEKSPSQNR 12 1 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 INENEKS(0.786)PS(0.214)QNR;INENEKS(0.5)PS(0.5)QNR;INENEKS(0.918)PS(0.082)QNR 58.83 0.0031476 35301700.0 4957.299999999999 5816.299999999999 4901.5 5018.0 6097.7 4608.55 4430.57 4411.4 6762.9 7553.799999999999 7646.299999999999 True False 5793.971045651346 6112.324826574072 5596.606403303131 6247.410225266579 5200.736407574348 5096.223702092097 5235.547218772996 5036.729459345901 5231.113948132117 5847.3913336580545 5747.512682855678 1.0080832118795056 1.0634730471855411 0.9737440719352065 1.086976326977416 0.9048673216655415 0.8866833329996263 0.9109239957643191 0.876332030439884 0.9101526585119277 1.0173777173385465 1.0 12.488722029158879 -6.770050956987629 24.999791249387922 0.9383289844914247 1.0310033672739838 0.49566315114591 0.04974367412183049 141.7689970668788 411562.6383340356 0.007762956510883098 0.014836812351875056 1.6980444044681426e-07 6.770050956987629 0.09267438278255913 INENEKS(ph)PSQNR ddPTM_A549_PD325901_60min_R1 2 INENEKSPSQNR 12 1 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 INENEKS(0.916)PS(0.084)QNR;INENEKS(0.985)PS(0.015)QNR 121.79 3.3658e-06 74141000.0 9928.4 11202.0 10649.5 10515.2 11949.8 10369.0 9882.0 10649.099999999999 11199.2 11934.7 10355.6 True False 10936.323859098224 12146.031853422419 11372.239110645827 11164.70002224811 11110.48727257201 10284.558301830992 10258.06491763789 10436.69534644266 10728.536570267079 11181.141005211357 9081.926849557018 1.20418541574486 1.3373849024136168 1.2521835177741518 1.229331639330775 1.2233623389197348 1.1324202971677353 1.129503142622013 1.149171923461564 1.1813062082514325 1.2311419361142213 1.0 13.14878270127389 -14.999999999999764 0.08767664002687948 0.31008229784958546 1.3947032105037032 0.09498976918142266 0.07851309395359045 44.798218167185425 0.2875266425070809 5.8664629882738835 0.4923700742414559 1.000000000000544e-15 14.999999999999764 1.0846209126541178 INENEKS(ph)PSQNRK ddPTM_A549_MK2206_60min_R1 1 INENEKSPSQNRK 13 2 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 INENEKS(0.759)PS(0.241)QNRK 49.559 0.0061867 7909900.0 1722.7 2171.4 2012.4 1931.5 3294.9 1943.5 1486.2 2054.5 3265.7 3400.0 3098.8 True False 2013.449644028722 2281.9149852007195 2297.788580232016 2404.7175867083297 2810.2245747276384 2149.159880009111 1756.2233023155986 2345.73166664237 2526.0241642512915 2631.9376385974474 2329.282437470827 0.8644076869505609 0.9796643586419086 0.9864791591040339 1.032385574211177 1.2064765223486706 0.9226703663909062 0.7539761061447467 1.0070619298488352 1.0844645216121107 1.129934951750741 1.0 11.185669869008436 -8.520385052240133 24.97972721172349 1.0401953551529137 0.9688176242634094 0.13956485390931783 0.10944850211116716 206.38713230011453 2067417.4573002886 0.01888481593569083 0.02159925442891884 3.0172753708739035e-09 8.520385052240133 -0.07137773088950428 INENEKS(ph)PSQNRK ddPTM_A549_PD325901_60min_R1 3 INENEKSPSQNRK 13 2 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 INENEKS(0.858)PS(0.142)QNRK;INENEKS(0.994)PS(0.006)QNRK;INENEKS(0.82)PS(0.18)QNRK 68.173 0.0013088 90138000.0 8849.599999999999 8772.2 9296.8 9855.5 11996.8 11451.900000000001 10869.4 10212.5 10864.8 11106.300000000001 11862.3 True False 9748.004877268804 9511.464080038582 9927.73675419992 10464.251851535511 11154.186154713201 11358.639523265345 11283.0409649639 10008.803675948739 10408.190239359748 10405.04632258699 10403.31230131525 0.9370097325672326 0.9142726666809843 0.954286141438318 1.0058577065126226 1.0721764214752085 1.0918291400162345 1.0845623622716227 0.9620785559502394 1.0004688831694384 1.0001666797286783 1.0 13.344755319441502 -6.163141803260351 3.093922381946298 1.0156847513688962 0.9270516857304989 0.5035026170844572 0.04009969420449709 0.20052458447045501 3.6653779884854294 0.006385302492731978 0.01906768051696916 6.868441391198552e-07 6.163141803260351 -0.08863306563839735 INEWLT(ph)KTPDGNK ddPTM_A549_MK2206_60min_R1 1 INEWLTKTPDGNK 13 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 INEWLT(0.642)KT(0.358)PDGNK 53.328 0.0087916 2687100.0 1382.2 2271.7 1690.6 2039.9 2695.8 2127.4 2314.8 2561.6 3289.2 3079.6 2650.7 True False 1615.4815684544608 2387.3198267847806 1930.352501361679 2539.675591574592 2299.2513911046667 2352.5200559461705 2735.369196743474 2924.7146445709895 2544.20145177308 2383.916221124912 1992.4580344016786 0.8107982906348031 1.1981782228611286 0.9688296907800874 1.2746444581138892 1.1539773241924847 1.1807124744048203 1.3728616359866703 1.4678927204854586 1.2769159539849912 1.1964699782702253 1.0 10.960333622831072 -4.689557866640504 1.2359599004280228 1.1821084524472782 5.1666642834258236e-21 0.3765646236390445 0.1413338746222728 5.522663944752229 2.618123612137399 0.024462524197077524 11.792343468378116 2.0438175937496644e-05 4.689557866640504 -1.1821084524472782 INEWLTKT(ph)PDGNK ddPTM_A549_MK2206_60min_R1 1 INEWLTKTPDGNK 13 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 INEWLT(0.041)KT(0.959)PDGNK 48.623000000000005 0.012706 2240200.0 2046.3 2267.6 2204.1 1839.0 3719.6 2636.5 2296.4 2855.3 4058.4 3077.8 3971.1 True False 2391.6654127683123 2383.0111542972986 2516.6745228033105 2289.555082555847 3172.4517673243236 2915.492680032941 2713.626154916932 3260.0475189895174 3139.178879933073 2382.522842375066 2984.966273215567 0.801236996956713 0.798337715129421 0.8431165689829428 0.767028794630036 1.0628099204306207 0.9767255014550682 0.9090977607575 1.0921555624404486 1.0516630985419408 0.7981741246973901 1.0 11.543498915401905 -6.760633321333251 24.99999986802075 1.0198130980345637 0.8050438708349874 0.5025475064985028 0.08239681182087936 6.70147656325883 207834.17823065328 0.007109840489913735 0.014145466451240207 1.735268481933822e-07 6.760633321333251 -0.21476922719957625 INFDKYHPGYFGK ddPTM_A549_PD325901_60min_R1 2 INFDKYHPGYFGK 13 1 E9PLL6;P46776 E9PLL6 RPL27A 60S ribosomal protein L27a 0 ; 83.76899999999999 0.0015272999999999999 5359800.0 2302.2 2439.1000000000004 3295.8 2385.6 2652.0 3134.7 3168.5 3442.0 3565.2 3002.3999999999996 3304.0 False True 2535.917649209937 2644.6515170221955 3519.4728072554117 2532.9530939093006 2465.7326689033257 3109.1720425064723 3289.079001369728 3373.346609803238 3415.367042316965 2812.82795160721 2897.6289457816465 0.8751699050017128 0.9126950228987275 1.214604379342304 0.8741468080641452 0.8509483840202959 1.0730055851467073 1.1350932306767407 1.1641748039251676 1.1786764648693335 0.9707343501320659 1.0 11.500657147895721 -7.438159669059207 8.167363482450307 1.0975274392559522 0.9548946969298514 0.2921190306020721 0.10910613171263905 0.3455794636731469 30.458422518262754 0.01707234365276421 0.027299954451540175 3.646198692034948e-08 7.438159669059207 -0.1426327423261008 INFS(ph)DLDQR ddPTM_A549_MK2206_60min_R1 2 INFSDLDQR 9 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 INFS(1)DLDQR;INFS(1)DLDQR 136.96 4.4102e-05 11335800.0 1879.85 1976.8200000000002 1674.6100000000001 1689.85 2692.5 2176.6 1966.4 1886.45 2707.7 3080.5 2652.5 True False 2197.122722080102 2077.431694319097 1912.094878921851 2103.86332586025 2296.4368167331813 2406.9263672898524 2323.6694265061205 2153.86006451083 2094.4102733083932 2384.612910499833 1993.8110447242052 1.1019713868542744 1.0419401075223047 0.9590150902119926 1.0551969462839783 1.151782573784888 1.2071988334395005 1.1654411448139728 1.0802729126263635 1.0504557484774608 1.1960074736318285 1.0 10.961312975362873 -9.201847052234527 1.418300572588032 1.0151547537166854 1.0948849638528095 0.0 0.08382702396417142 0.456279322234503 1.8984004907811574 0.016098810712502055 0.014439742257943219 6.282795843723687e-10 9.201847052234527 0.07973021013612414 INFS(ph)DLDQR ddPTM_A549_PD325901_60min_R1 2 INFSDLDQR 9 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 INFS(1)DLDQR;INFS(1)DLDQR 108.35 0.00044799 18596300.0 2490.1 2413.1 2004.15 2468.2 3041.1000000000004 2329.3999999999996 2467.3 2171.7 2418.7 2456.8 2663.1 True False 2742.893118885266 2616.460405775187 2140.1636709329837 2620.6551083110917 2827.503627225455 2310.430138710109 2561.1944516583667 2128.3837398343076 2317.050450255819 2301.67722871989 2335.5555827818102 1.1744071256990973 1.1202732339423922 0.9163402861018186 1.1220692530852585 1.210634269666021 0.9892421981917574 1.096610361380398 0.9112965478215053 0.9920767749385138 0.9854945203138481 1.0 11.189550064225147 -8.229845899107444 24.21043070201575 0.9897817832443591 1.0864342238017455 0.3255455651455389 0.07997136212685133 478.01683598143967 366309.79312737164 0.012508657383738622 0.016147678732899077 5.8905263206942035e-09 8.229845899107444 0.09665244055738642 INGTVTENMS(ph)LTDAK ddPTM_A549_PD325901_60min_R1 1 INGTVTENMSLTDAK 15 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 INGTVTENMS(0.963)LT(0.037)DAK 114.69 3.8586e-07 3240400.0 1635.6 1840.3 1688.8 2264.4 2217.7 2075.1 2147.5 2053.1 2038.1 2579.1 2350.1 True False 1801.6449079349186 1995.3885395334123 1803.4121235793843 2404.266845174472 2061.936402649663 2058.2010735972126 2229.2242876570913 2012.1493098742083 1952.4457446836664 2416.2551858480406 2061.0525985113322 0.8741382482117245 0.9681405224566573 0.874995681760845 1.1665237689280896 1.0004288120249667 0.9986164715465392 1.0815950496689055 0.9762726634572809 0.9473051517918024 1.1723403796648693 1.0 11.009165607900812 INHTVILDDPFDDPPDLLIPDRS(ph)PEPTR ddPTM_A549_PD325901_60min_R1 3 INHTVILDDPFDDPPDLLIPDRSPEPTR 28 1 Q8WUA2 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 1 INHTVILDDPFDDPPDLLIPDRS(0.982)PEPT(0.018)R;INHTVILDDPFDDPPDLLIPDRS(0.977)PEPT(0.023)R;INHTVILDDPFDDPPDLLIPDRS(0.979)PEPT(0.021)R 181.38 1.7167999999999995e-66 61765400.0 4033.4300000000003 4056.88 4465.48 3876.0499999999997 5138.41 4263.88 4443.13 4849.0199999999995 4801.879999999999 4986.2300000000005 5402.26 True False 4442.900844345769 4398.767515221598 4768.534325912646 4115.464805351754 4777.505808152165 4229.156374964909 4612.215743524026 4752.3024921173965 4600.07368258751 4671.398586844664 4737.816267747687 0.9377528788084224 0.9284377583752801 1.0064835899977949 0.8686417059621874 1.0083771801525234 0.8926383244860212 0.9734897857735269 1.0030575741124288 0.9709269888539477 0.9859813726093273 1.0 12.210006536691289 -7.985425857704191 24.892855662664058 0.9872001430426177 0.9418776058135054 0.2585680389560894 0.039615617571614525 234.69906894486272 400868.42002570693 0.005536817933588382 0.007648565479125827 1.0341276310916931e-08 7.985425857704191 -0.04532253722911228 INHTVILDDPFDDPPDLLIPDRS(ph)PEPTREQLDSGR ddPTM_A549_MK2206_60min_R1 4 INHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGR 35 2 Q8WUA2 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 1 INHTVILDDPFDDPPDLLIPDRS(0.807)PEPT(0.163)REQLDS(0.03)GR;INHTVILDDPFDDPPDLLIPDRS(0.975)PEPT(0.02)REQLDS(0.005)GR;INHTVILDDPFDDPPDLLIPDRS(0.822)PEPT(0.151)REQLDS(0.027)GR;INHTVILDDPFDDPPDLLIPDRS(0.963)PEPT(0.033)REQLDS(0.004)GR 176.15 9.257799999999998e-64 105818000.0 1875.54 2288.3099999999995 1800.13 2142.11 3672.2799999999997 2837.25 2804.2300000000005 2720.7 4135.0199999999995 3761.45 3568.44 True False 2192.0852994494853 2404.7752048377342 2055.415502351947 2666.9270461629735 3132.092476639901 3137.4859117858746 3313.7222924589378 3106.3675567943055 3198.4445722700734 2911.7358325595205 2682.2978640662177 0.817241563219382 0.8965354806614303 0.7662890575605383 0.9942695335558509 1.1676900312226395 1.1697007829807597 1.2354042915411023 1.1580994036528147 1.19242706603114 1.0855378411051961 1.0 11.389253739335542 -6.49652587084658 4.005423077482649 1.1191762555658742 0.835768327419514 0.8064504887479836 0.06753419202118725 0.10077837074421508 3.5732790523063382 0.012984722824197291 0.03022246866655778 3.187675680755332e-07 6.49652587084658 -0.2834079281463602 INHTVILDDPFDDPPDLLIPDRS(ph)PEPTREQLDSGR ddPTM_A549_PD325901_60min_R1 4 INHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGR 35 2 Q8WUA2 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 1 INHTVILDDPFDDPPDLLIPDRS(0.981)PEPT(0.015)REQLDS(0.004)GR;INHTVILDDPFDDPPDLLIPDRS(0.984)PEPT(0.013)REQLDS(0.003)GR;INHTVILDDPFDDPPDLLIPDRS(0.96)PEPT(0.034)REQLDS(0.007)GR;INHTVILDDPFDDPPDLLIPDRS(0.963)PEPT(0.031)REQLDS(0.006)GR 227.41 6.057699999999999e-116 158185000.0 4772.53 4758.79 4613.4400000000005 4901.98 5320.06 5402.97 5008.77 5729.37 5193.26 5630.639999999999 5874.73 True False 5257.033732249109 5159.829934274954 4926.535781268401 5204.764171395676 4946.397338810645 5358.9700036689965 5199.381483254115 5615.093220746184 4975.005342248122 5275.120429468965 5152.17545298178 1.0203522337746946 1.001485679469387 0.9562049713227851 1.010207089974675 0.9600599560226463 1.0401373269552643 1.0091623491286608 1.089848991360823 0.9656125626251486 1.0238627309200101 1.0 12.330966008711801 -5.5104680035023845 23.573041249809595 0.99427410865669 1.0156356263864021 0.0 0.03824013011232761 807.2656020204493 1533296.66308889 0.0051383865821582626 0.024015667053068086 3.0869670685504886e-06 5.5104680035023845 0.021361517729712176 INLPDKNVPPPSIEPLT(ph)PPPQYDEVQEKAPDTRPPD ddPTM_A549_PD325901_60min_R1 1 INLPDKNVPPPSIEPLTPPPQYDEVQEKAPDTRPPD 36 3 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 INLPDKNVPPPS(0.001)IEPLT(0.996)PPPQY(0.003)DEVQEKAPDTRPPD 72.238 4.8992e-05 4678000.0 1220.8 1271.7 1473.4 1674.3 1675.9 2403.8 1602.7 2140.1 1354.9 1633.6 1807.1 True False 1344.7347172945404 1378.8706220315376 1573.393784273961 1777.7177083888091 1558.1905655411333 2384.224249777351 1663.6916255310912 2097.414026624028 1297.9582647916698 1530.4542172080787 1584.8381561507288 0.8484997108857133 0.8700387586455848 0.992778838752492 1.121702996289885 0.9831859231138671 1.5043960422862226 1.0497549034103788 1.3234247411850866 0.8189847397062702 0.9656848626898671 1.0 10.630119804370356 -4.00576544597868 19.517071345876577 0.9951228420893891 0.9994380434161959 0.0 0.20346004617456642 0.0 0.0 0.02824579500341968 0.0 9.868122999090416e-05 4.00576544597868 0.00431520132680685 INNFS(ph)ADIKDSK ddPTM_A549_PD325901_60min_R1 2 INNFSADIKDSK 12 1 P13797-3;P13797 P13797-3 PLS3 Plastin-3 1 INNFS(1)ADIKDSK;INNFS(1)ADIKDSK 87.66 7.8029e-05 14629800.0 5288.200000000001 5195.2 5264.799999999999 5915.5 5528.3 5578.0 4835.6 6114.7 5435.200000000001 9738.7 5859.200000000001 True False 5825.054171032919 5633.017736555983 5622.100987814271 6280.8869999247445 5140.011279599643 5532.574617380005 5019.621404141853 5992.737511610646 5206.777445417138 9123.796819983061 5138.555544529001 1.1335975879904285 1.0962259116870758 1.0941014335828478 1.2223059467775879 1.0002832965525092 1.0766789556786078 0.976854557792262 1.166229976435905 1.0132764743510017 1.7755567184044805 1.0 12.32714715738625 -7.611671828709879 0.3363321995941221 0.9937188202122005 1.1457827557247746 0.0 0.24291254156952996 1.4195056438052427 0.3395837918152888 0.031012912340650824 0.0781285879176995 2.4452776099964346e-08 7.611671828709879 0.15206393551257413 INNYLTVPAHKLDS(ph)PTMSR ddPTM_A549_MK2206_60min_R1 5 INNYLTVPAHKLDSPTMSR 19 1 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 INNYLT(0.048)VPAHKLDS(0.749)PT(0.165)MS(0.038)R;INNYLT(0.001)VPAHKLDS(0.691)PT(0.121)MS(0.188)R;INNYLTVPAHKLDS(0.935)PT(0.051)MS(0.014)R;INNYLTVPAHKLDS(0.781)PT(0.169)MS(0.049)R;INNYLTVPAHKLDS(0.68)PT(0.139)MS(0.181)R 95.12299999999999 1.1347e-06 37900100.0 6988.790000000001 7777.590000000001 8402.5 7433.33 10767.9 7881.0 7197.400000000001 6696.2 11732.199999999999 10156.5 11898.3 True False 8168.3268924893955 8173.436110227166 9594.100847445588 9254.496183694866 9183.956174150877 8714.962189015594 8505.07441534538 7645.406856252437 9074.875432473586 7862.139596004401 8943.623733625634 0.9133128959549885 0.9138841652625916 1.0727308228961303 1.034759115469095 1.0268719310743872 0.974433009323689 0.9509651421681095 0.8548444214516484 1.0146754495445152 0.879077634543687 1.0 13.126643778629077 -7.136378133270005 0.0044312137710345225 1.9628490955398452 3.3316050257877223e-08 0.0 0.07218948958041088 40676.84462073457 56.331572559141534 12288.089985929235 12664.354594386834 7.30502769413671e-08 7.136378133270005 -1.9628490622237948 INNYLTVPAHKLDS(ph)PTMSR ddPTM_A549_PD325901_60min_R1 6 INNYLTVPAHKLDSPTMSR 19 1 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 INNYLTVPAHKLDS(0.984)PT(0.013)MS(0.003)R;INNYLTVPAHKLDS(0.933)PT(0.052)MS(0.015)R;INNYLT(0.006)VPAHKLDS(0.711)PT(0.213)MS(0.07)R;INNYLTVPAHKLDS(0.951)PT(0.038)MS(0.011)R;INNYLT(0.001)VPAHKLDS(0.769)PT(0.149)MS(0.08)R;INNYLTVPAHKLDS(0.725)PT(0.136)MS(0.139)R 101.5 5.3435e-10 84209100.0 13453.8 13192.300000000001 14084.199999999999 15690.4 17543.8 19278.6 17963.6 19275.7 18719.1 17662.4 19285.4 True False 14819.619871835903 14304.06141938087 15040.038507174788 16659.56037251613 16311.584010824348 19121.601473399463 18647.2146280591 18891.231042005875 17932.401324423736 16547.193049715966 16913.41806022316 0.8762049054229059 0.8457226900233162 0.8892370810927821 0.9849907519105171 0.9644167697353735 1.1305580814778942 1.1025101231260563 1.1169375093041731 1.0602470334838474 0.9783470727677169 1.0 14.045880625354167 -6.457406562690182 1.5100239435749743 1.0474697387344776 0.8583982536617483 0.7208246759775336 0.04986632089019777 0.1814602264184256 0.7957865413096368 0.008019492706695166 0.026066032784758886 3.4881362239163174e-07 6.457406562690182 -0.1890714850727293 INPPSSGGTSS(ph)SPIK ddPTM_A549_MK2206_60min_R1 1 INPPSSGGTSSSPIK 15 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2;A0A0A0MT46 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 INPPSSGGT(0.003)S(0.006)S(0.72)S(0.271)PIK 230.97 1.7243999999999997e-54 38367000.0 4785.9 6588.1 5752.4 4684.7 7172.1 5341.5 5309.6 5395.5 7312.0 8070.0 7750.7 True False 5593.642915979017 6923.406149949737 6568.176818190541 5832.451710304174 6117.093590823423 5906.733984599266 6274.285591424376 6160.328648025751 5655.843674864638 6246.981395141588 5825.98728156226 0.9601193146578687 1.188366162737863 1.127392920849161 1.0011095851105567 1.0499668631585308 1.0138597458481498 1.0769480412840695 1.0573879327752045 0.9707957469738936 1.0722614199505147 1.0 12.508286836664364 -7.84118110466342 0.5684281161309608 0.9857796021767332 1.0843644392107676 0.0 0.06586892097515222 0.7827723643947172 0.523023979852925 0.015261219788660471 0.029315931785561192 1.4415141019628838e-08 7.84118110466342 0.09858483703403442 INPPSSGGTSS(ph)SPIK ddPTM_A549_PD325901_60min_R1 1 INPPSSGGTSSSPIK 15 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2;A0A0A0MT46 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 INPPSSGGTS(0.006)S(0.497)S(0.497)PIK 242.9 9.595099999999999e-65 70641000.0 7393.2 7947.7 7502.3 7253.8 9836.6 8219.5 7270.7 8093.9 9148.8 8307.7 9309.4 True False 8143.75222141382 8617.480571455573 8011.451192994807 7701.850751424922 9145.71115042777 8152.563117166539 7547.390467179699 7932.460814958279 8764.307751809005 7783.1504041990465 8164.4028171488035 0.9974706544743716 1.0554942920448644 0.9812660365271626 0.9433452665083697 1.120193522448181 0.9985498388250276 0.9244265179232571 0.971591063377796 1.0734781156804438 0.9533030863997841 1.0 12.995131648802252 -8.750728698889205 24.98445045040442 1.0346980012592983 1.0000095728587088 0.0 0.05795521209459912 442.6069028609641 1032452.2051697572 0.009516612306841516 0.010736129173084263 1.7752981524787965e-09 8.750728698889205 -0.0346884284005895 INPPSSGGTSSS(ph)PIK ddPTM_A549_MK2206_60min_R1 1 INPPSSGGTSSSPIK 15 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2;A0A0A0MT46 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 INPPSSGGTSS(0.17)S(0.83)PIK 237.34 1.9846999999999996e-64 38902000.0 5516.8 6194.9 6882.7 5724.6 8131.2 5988.0 5949.0 5735.2 9417.6 8268.4 8306.2 True False 6447.90096718967 6510.193949442726 7858.770354384266 7127.127256987055 6935.111251335508 6621.646185487291 7029.85629489672 6548.182163313371 7284.528636816908 6400.562697346799 6243.541300542204 1.032731370997693 1.042708558503067 1.258703991227189 1.1415199986533473 1.1107656564605806 1.0605593631473618 1.1259405450375142 1.0487929602939778 1.166730271518233 1.0251494126884302 1.0 12.60814883419098 -10.978748051361315 1.2060208347414587 0.9989969707208447 1.1159844148830729 0.25403718059633285 0.06328711484390143 0.4833950549339451 1.2327214083830527 0.04741798095894496 0.0105232691564156 1.0501514796868951e-11 10.978748051361315 0.11698744416222817 INPPSSGGTSSS(ph)PIK ddPTM_A549_PD325901_60min_R1 3 INPPSSGGTSSSPIK 15 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2;A0A0A0MT46 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 INPPSSGGTS(0.001)S(0.04)S(0.959)PIK;INPPSSGGT(0.018)S(0.115)S(0.115)S(0.753)PIK;INPPS(0.001)S(0.007)GGT(0.034)S(0.034)S(0.161)S(0.764)PIK 243.63 8.253699999999999e-65 76651100.0 11525.7 11072.800000000001 11923.4 11988.300000000001 13291.5 12612.1 12711.800000000001 11528.4 12841.8 13098.699999999999 13287.400000000001 True False 12695.78057922811 12005.943715994988 12732.593625228825 12728.790063595277 12357.950893185724 12509.39123912843 13195.55450516386 11298.457018145164 12302.103804562446 12271.645846561876 11653.13403576847 1.0894734875836245 1.0302759480105175 1.0926325558555348 1.0923061576847188 1.0604830301662942 1.0734787054479713 1.1323609995955628 0.9695638086256753 1.0556905778996457 1.053076864034596 1.0 13.508430390205662 -10.00852298617464 0.33530607569945076 0.9873206659483632 1.0787487149939448 0.14618217810147383 0.04048258427457562 1.7798311664418602 0.37165037096330095 0.06115992996707173 0.017742417477055395 9.805664138989498e-11 10.00852298617464 0.09142804904558155 INPY(ph)MSSPCHIEMILTEK ddPTM_A549_MK2206_60min_R1 1 INPYMSSPCHIEMILTEK 18 0 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3QLC8;A0A0A0MRF8;P18621-2 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 INPY(0.353)MS(0.323)S(0.323)PCHIEMILTEK 49.606 0.0050803 2409700.0 1920.5 1591.3 1954.0 1875.7 2553.6 2248.6 1884.8 2442.0 3435.9 2778.5 2899.5 True False 2244.633448283021 1672.2903730081537 2231.106582077795 2335.246584203371 2177.968822733465 2486.5453595001213 2227.243762753628 2788.1609783113504 2657.674136004842 2150.834920247942 2179.4741278710007 1.029896808399222 0.7672907659801932 1.0236903267382351 1.0714724962046396 0.9993093264479326 1.1408923499950332 1.0219179637288425 1.2792815214718514 1.2194107294134142 0.9868595789888845 1.0 11.089764362493137 -6.344474522779086 1.0954350066978114 1.114444946663889 0.8992023406456469 0.28816031381775864 0.10818149932150864 0.5287389636185358 1.1140752373925529 0.017724289803764653 0.08318805264232627 4.524030010835338e-07 6.344474522779086 -0.2152426060182422 INPY(ph)MSSPCHIEMILTEK ddPTM_A549_PD325901_60min_R1 1 INPYMSSPCHIEMILTEK 18 0 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3QLC8;A0A0A0MRF8;P18621-2 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 INPY(0.356)MS(0.322)S(0.322)PCHIEMILTEK 59.434 0.0011062000000000001 2067000.0 1318.6 1525.3 1786.3 1682.3 1510.0 2130.4 1586.9 1444.7 1347.4 1537.2 1896.2 True False 1452.463301297985 1653.8423840408163 1907.529059894515 1786.2118502194924 1403.9428092172036 2113.050728731869 1647.2903478850005 1415.8843251547744 1290.7734637097171 1440.1409296598072 1662.9794210021655 0.8734102677125634 0.9945056223510914 1.147055120348378 1.074103399994609 0.8442334231479196 1.2706415377398212 0.9905656841455619 0.8514142191257643 0.7761812608191236 0.8660004516423488 1.0 10.699554600369758 -8.099466896653613 5.69369457115514 0.8887384955011498 1.0380331025673246 0.2743785327817255 0.12102915508120847 0.27001583285565833 12.717520964550317 0.021145835919445747 0.027473197365519068 7.953038838873015e-09 8.099466896653613 0.1492946070661748 INPYMS(ph)SPCHIEMILTEK ddPTM_A549_PD325901_60min_R1 2 INPYMSSPCHIEMILTEK 18 0 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3QLC8;A0A0A0MRF8;P18621-2 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 INPY(0.021)MS(0.489)S(0.489)PCHIEMILTEK;INPY(0.015)MS(0.493)S(0.493)PCHIEMILTEK 62.475 0.00069883 5263400.0 4899.6 5535.5 5969.8 5294.3 5414.3 6078.9 5299.4 5944.2 5907.5 6382.4 6901.9 True False 5397.003785105117 6001.996011838936 6374.946527323668 5621.316886772309 5034.018246320993 6029.395453852874 5501.071566942951 5825.638267865311 5659.22831888463 5979.414174772804 6053.010054748886 0.8916231323407269 0.9915721199124844 1.0531861783910645 0.9286812405609846 0.8316553583735676 0.9960987011945428 0.9088158646997601 0.9624365753853009 0.9349444768301162 0.9878414409838385 1.0 12.563437032195298 -10.795022407916921 0.9235949639425038 1.0016947744633744 0.9455208389974743 0.10355063345856086 0.055835153750584315 1.1443463313322872 1.6456496871226067 0.04474640802201958 0.00992484912017704 1.603162671557688e-11 10.795022407916921 -0.056173935465900104 INQDNS(ph)RKSPK ddPTM_A549_MK2206_60min_R1 1 INQDNSRKSPK 11 2 Q6IEG0 Q6IEG0 SNRNP48 U11/U12 small nuclear ribonucleoprotein 48 kDa protein 1 INQDNS(0.593)RKS(0.407)PK 75.462 0.0002706 20198000.0 3714.3 3680.2 3310.5 2705.5 4000.2 2998.6 2210.9 1963.2 3605.6 5744.1 6061.5 True False 4341.183034083636 3867.5064605948637 3779.9786796154262 3368.347621454511 3411.7758790328976 3315.9098616904157 2612.591911646858 2241.4896120478456 2788.937356960056 4446.503820549293 4556.262261110565 0.9527948097143765 0.8488331529125321 0.8296227176997656 0.7392786956546908 0.7488102491714985 0.7277697532894386 0.5734068326018732 0.4919579874011673 0.6121108042363362 0.9759104208074012 1.0 12.153635076465362 -5.505604792061031 1.3173553831683786 0.7575786674122897 0.9830063756874475 0.16675509357837104 0.1462743098851751 1.7510028237945958 3.550983643462958 0.026781729513143917 0.46609148490742075 3.1217290650991215e-06 5.505604792061031 0.2254277082751578 INQDNSRKS(ph)PK ddPTM_A549_MK2206_60min_R1 1 INQDNSRKSPK 11 2 Q6IEG0 Q6IEG0 SNRNP48 U11/U12 small nuclear ribonucleoprotein 48 kDa protein 1 INQDNS(0.015)RKS(0.985)PK 64.04 0.0013179 20589000.0 3726.7 4044.8 3980.0 3016.0 3427.2 2881.6 2623.9 2405.6 4185.4 7044.4 6110.8 True False 4355.675850932744 4250.663043262352 4544.423846811479 3754.920135393383 2923.0634199843867 3186.5289993487277 3100.6286656882653 2746.601166841024 3237.413582710402 5453.065147451721 4593.31971049978 0.9482631572490348 0.9254010848724169 0.9893550053621283 0.8174741520408615 0.6363727334943861 0.6937311574599746 0.675030013391099 0.5979555833143123 0.7048091112208151 1.1871730014757444 1.0 12.165321488142583 -6.330473051750645 6.082599565432015 0.7951388390643283 0.9511184262778755 0.16781027873478127 0.16376940878432722 0.31879762213902335 21.984367955500403 0.02249367325095534 0.053075709512004875 4.6722594193985863e-07 6.330473051750645 0.1559795872135472 INQDNSRKS(ph)PK ddPTM_A549_PD325901_60min_R1 3 INQDNSRKSPK 11 2 Q6IEG0 Q6IEG0 SNRNP48 U11/U12 small nuclear ribonucleoprotein 48 kDa protein 1 INQDNS(0.062)RKS(0.938)PK;INQDNS(0.129)RKS(0.871)PK;INQDNS(0.022)RKS(0.978)PK 89.911 6.1736e-05 72706700.0 16766.800000000003 16337.900000000001 15090.0 16371.7 16008.9 15881.800000000001 14291.8 16427.7 16417.3 19028.1 23560.3 True False 18468.95319293422 17714.75217086504 16114.098143541529 17382.942726171572 14884.490091706812 15752.463886394007 14835.682269773037 16100.03663621866 15727.337973698617 17826.66251864414 20662.532461047 0.8938378307572842 0.8573369311947063 0.779870433303363 0.8412784231043261 0.720361365179561 0.7623685003806066 0.7179992238483477 0.7791899016526866 0.7611524871575054 0.8627530314713823 1.0 14.334729465557286 -10.701015918983405 0.8979346319999312 1.0036018536158788 0.7874573736784878 0.3495559759064216 0.06513310857990487 0.287898273840819 0.40189865629435834 0.041322570710092744 0.010120209603843326 1.9906003725637364e-11 10.701015918983405 -0.21614447993739105 INS(ph)DDSNLYLTASK ddPTM_A549_PD325901_60min_R1 1 INSDDSNLYLTASK 14 0 Q9BZG1-4;Q9BZG1-2;Q9BZG1;C9JY26 Q9BZG1-4 RAB34 Ras-related protein Rab-34 1 INS(0.996)DDS(0.004)NLYLTASK 95.34700000000001 3.9709e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 INS(ph)IYNAK ddPTM_A549_MK2206_60min_R1 2 INSIYNAK 8 0 B4DDL8;P78524-3;P78524-2;P78524;E9PKM1;E9PNX7;E9PKE0;E9PJC3 B4DDL8 ST5 Suppression of tumorigenicity 5 protein 1 INS(1)IYNAK;INS(0.999)IY(0.001)NAK 92.23899999999999 0.0025901 11319500.0 5637.9 7272.5 6743.1 6039.8 8589.2 6729.4 5854.4 6664.2 9967.2 9940.6 9257.2 True False 6589.4396865789295 7642.639186640987 7699.372975234798 7519.551271136922 7325.740058044441 7441.500641385804 6918.068699418947 7608.870758256548 7709.645114347759 7695.011555953469 6958.381754277442 0.9469787544393181 1.0983357131768343 1.106489015280292 1.0806465550003086 1.052793640351965 1.0694297760842713 0.9942065474010945 1.0934827991550244 1.1079652405688294 1.1058622288469884 1.0 12.764536115659949 INS(ph)LLEYSR ddPTM_A549_MK2206_60min_R1 2 INSLLEYSR 9 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 INS(0.981)LLEY(0.003)S(0.015)R;INS(1)LLEYSR 66.498 0.0053411000000000005 2414300.0 1392.46 1795.99 1250.49 1235.8200000000002 2382.1 1553.0500000000002 1112.0700000000002 1707.12 2277.6000000000004 2093.2 2254.84 True False 1627.473205621543 1887.3982197064756 1427.828285477208 1538.5959554780688 2031.6962455487878 1717.392720168845 1314.11872413276 1949.1094878357378 1761.7272365798265 1620.3446662094632 1694.900997581877 0.9602172681138701 1.1135743163755496 0.8424257744341984 0.9077792494506705 1.1987108677423746 1.0132702279478607 0.77533656892504 1.1499842708314771 1.039427812652946 0.9560113944833453 1.0 10.726985289900357 INS(ph)LLEYSR ddPTM_A549_PD325901_60min_R1 2 INSLLEYSR 9 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 INS(1)LLEYSR;INS(0.974)LLEY(0.01)S(0.016)R 78.692 0.0018125 4902400.0 1640.31 1535.21 1273.47 1436.99 1633.74 1610.7 1369.5700000000002 1489.06 1563.99 1994.94 1843.81 True False 1806.8330636676012 1664.587534519964 1359.8953321972058 1525.749608658924 1518.9917384970292 1597.582993225883 1421.6897358074616 1459.3595301550274 1498.2609392217303 1868.979147941409 1617.0330588745933 1.1173754635079032 1.0294084746037704 0.8409817750687498 0.9435488039563026 0.9393696252284428 0.9879717575704686 0.8791964567483334 0.9024920808797181 0.9265493559324478 1.155807630328945 1.0 10.659133458456283 -5.526857258858456 24.969144900817998 0.9464764284324882 1.0953837523049756 0.28576877599964257 0.07800718362362664 54.19516907380056 340133.1231358102 0.0070113291557520295 0.02739986562483691 2.97264290051071e-06 5.526857258858456 0.1489073238724874 INS(ph)LTEEKDDFINK ddPTM_A549_MK2206_60min_R1 2 INSLTEEKDDFINK 14 1 Q8IWJ2;B8ZZW2 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 1 INS(0.994)LT(0.006)EEKDDFINK;INS(0.857)LT(0.143)EEKDDFINK 81.317 0.00012699 3497400.0 2079.42 2663.0 2120.8 2156.5 3628.8 3142.6 2615.1000000000004 2930.2 3731.1000000000004 3772.0 3492.6 True False 2430.3752590620566 2798.5353254073484 2421.5613302306006 2684.842596808965 3095.008327042292 3475.1478461109486 3090.229819597312 3345.564823361145 2886.011807342375 2919.9025802322253 2625.291029143736 0.9257546047589044 1.0659905108958978 0.922397289804634 1.0226837965787938 1.1789200864529517 1.323719087725067 1.177099904464771 1.2743595990774148 1.0993111907610775 1.1122205301499772 1.0 11.358261647642456 -6.551995330841448 9.530660061508218 1.1042460337817859 0.979435974539371 0.3447843822360668 0.1011632402142293 0.42839387798728273 133.64856463126927 0.017684119129002043 0.036988113951463696 2.805463799709283e-07 6.551995330841448 -0.12481005924241484 INS(ph)YGYGDHYIHIK ddPTM_A549_MK2206_60min_R1 2 INSYGYGDHYIHIK 14 0 Q96EY1-3;Q96EY1-2;Q96EY1 Q96EY1-3 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial 1 INS(0.89)Y(0.109)GY(0.001)GDHYIHIK;INS(0.986)Y(0.014)GY(0.001)GDHYIHIK 79.805 0.00067194 5351000.0 644.2 1037.3400000000001 639.46 780.67 1135.12 800.6700000000001 829.4300000000001 744.97 1064.82 968.44 1222.47 True False 752.9252108221408 1090.1361751626214 730.1450434879571 971.9341850456082 968.1453516843715 885.3963679582686 980.1266946841797 850.5717788749412 823.6399701681298 749.6687313892089 918.896960544392 0.8193793680371706 1.1863530101533695 0.7945885935408791 1.057718358835135 1.0535951181194492 0.9635426015923741 1.0666339500171083 0.9256443490367275 0.8963355039069582 0.8158354674990704 1.0 9.84375928540665 INS(ph)YGYGDHYIHIK ddPTM_A549_PD325901_60min_R1 2 INSYGYGDHYIHIK 14 0 Q96EY1-3;Q96EY1-2;Q96EY1 Q96EY1-3 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial 1 INS(1)YGYGDHYIHIK;INS(0.99)Y(0.009)GY(0.001)GDHYIHIK 108.49 1.82e-05 12660000.0 1709.91 1500.1399999999999 1757.8899999999999 1592.0 2032.1100000000001 2284.2 1752.79 1619.47 1830.93 1777.99 1911.3000000000002 True False 1883.4988044307877 1626.562062541787 1877.190986451305 1690.3342243056718 1889.3816039989217 2265.5982325240966 1819.4933826134911 1587.1684004003623 1753.9823793305864 1665.7274079663273 1676.2222167289524 1.1236569863071755 0.9703737644737378 1.119893870703212 1.0084189360073381 1.1271665445921228 1.3516097149370065 1.0854726565813713 0.9468723087906726 1.0463901276486947 0.9937390110583876 1.0 10.71099770441627 -8.014552942543418 24.898017141808158 1.0168567619553521 1.1152622725148251 0.25901514559908745 0.0929763169640173 813.2659139120929 1391382.4721643326 0.015103049652431002 0.019879559855850926 9.670458320212829e-09 8.014552942543418 0.098405510559473 INSDDS(ph)NLYLTASK ddPTM_A549_MK2206_60min_R1 2 INSDDSNLYLTASK 14 0 Q9BZG1-4;Q9BZG1-2;Q9BZG1;C9JY26 Q9BZG1-4 RAB34 Ras-related protein Rab-34 1 INSDDS(1)NLYLTASK;INS(0.001)DDS(0.999)NLYLTASK 168.69 1.7799e-22 12946100.0 5758.700000000001 5473.700000000001 5483.8 4894.4 7565.4 5853.5 5280.9 6069.1 9713.3 8326.0 8294.2 True False 6730.627773302485 5752.287949936995 6261.485299282613 6093.528219717962 6452.539681824777 6472.913484761165 6240.371172923195 6929.413510839239 7513.25305895277 6445.150817341863 6234.521231725351 1.0795741201509776 0.9226511124327501 1.0043249620227535 0.9773851099760599 1.0349695577248186 1.0382374594897066 1.000938314423901 1.1114588038577555 1.2051050561381345 1.0337844042529987 1.0 12.606063059931783 -8.259168710588707 23.82848450748343 1.1006566868632328 1.0058388463733423 0.2728179366512383 0.06084339090168661 116.46526708637171 1222193.0395368584 0.012969700696506586 0.016333627869478926 5.505937654271911e-09 8.259168710588707 -0.0948178404898905 INSDDS(ph)NLYLTASK ddPTM_A549_PD325901_60min_R1 2 INSDDSNLYLTASK 14 0 Q9BZG1-4;Q9BZG1-2;Q9BZG1;C9JY26 Q9BZG1-4 RAB34 Ras-related protein Rab-34 1 INS(0.001)DDS(0.999)NLYLTASK;INSDDS(1)NLYLTASK 212.35 2.5309e-38 18918700.0 11061.1 11942.4 12547.7 12314.5 15425.0 13442.9 13654.599999999999 14389.6 13088.1 15134.8 14752.1 True False 12184.014729248547 12948.82795985644 13399.262377449708 13075.13869674132 14341.601213361164 13333.425479379282 14174.233275083827 14102.588139577183 12538.052672093769 14179.186145078866 12937.685221266769 0.9417461099780546 1.0008612621499984 1.0356769505741417 1.0106242711214373 1.1085136922164915 1.0305881810651878 1.0955772251889726 1.0900395162185246 0.969110969826651 1.0959600502392295 1.0 13.659291896529739 -8.785299590777607 24.99982948974631 0.9854135089279642 1.040757454334549 0.0 0.05653326377537302 253.79510327373157 265915.5499485462 0.008192050680733639 0.008723208798208329 1.6394584300743276e-09 8.785299590777607 0.05534394540658483 INSQLVAQQVAQQYAT(ph)PPPPKK ddPTM_A549_PD325901_60min_R1 2 INSQLVAQQVAQQYATPPPPKK 22 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 INSQLVAQQVAQQY(0.123)AT(0.877)PPPPKK;INSQLVAQQVAQQY(0.271)AT(0.729)PPPPKK 78.987 8.0151e-05 5554100.0 2190.2 2333.4 2325.7 1926.0300000000002 2922.6 2585.56 1902.9099999999999 2614.7 2128.3900000000003 2390.5 2081.3 True False 2412.5474916599787 2530.043807068013 2483.535987570212 2044.9964987684987 2717.326658422646 2564.5040565996846 1975.3262813623062 2562.5477573075314 2038.9411699756017 2239.563422034719 1825.3132944477425 1.3217169342920427 1.3860874266154348 1.3606080639004046 1.1203536976304238 1.4886905533906092 1.4049665141871375 1.0821847884255678 1.4038947533567616 1.1170362787460513 1.2269474116290322 1.0 10.833928392246262 -8.984982241113247 0.7338700052218861 1.018027281756713 1.337712850582519 0.24416574226664967 0.13464646836687447 0.30608802235669236 0.3525266275883229 0.03307722994483779 0.029374391815353052 1.0351844959032564e-09 8.984982241113247 0.319685568825806 INSSGES(ph)GDESDEFLQSR ddPTM_A549_MK2206_60min_R1 2 INSSGESGDESDEFLQSR 18 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 INSSGES(1)GDESDEFLQSR;INSS(0.001)GES(0.989)GDES(0.009)DEFLQSR 134.37 1.0027e-12 6939700.0 1825.58 2291.02 2094.21 2361.1 3082.9 2350.2 2465.5 3038.1000000000004 3399.0 3481.8 3638.1 True False 2133.693272854213 2407.6231322623908 2391.2004683997643 2939.569605993806 2629.409493892936 2598.8966040634987 2913.449436051077 3468.759978791039 2629.131927087649 2695.25896178488 2734.6593635480235 0.7802409694222023 0.8804106150678573 0.8744052368179976 1.0749308104611341 0.9615126216237282 0.9503547822832374 1.0653792844864913 1.2684431651811188 0.9614111220333269 0.9855922085623036 1.0 11.417145422935517 -6.112269385911324 4.6546280921572505 1.0090259426118302 0.8399249148298651 0.45275912079113345 0.08989126063761287 0.18227148353996844 6.203462645145351 0.013093328223279617 0.03649638425084891 7.722014523188256e-07 6.112269385911324 -0.16910102778196512 INT(ph)LGR ddPTM_A549_MK2206_60min_R1 2 INTLGR 6 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 INT(1)LGR;INT(1)LGR 94.302 0.038063 30521000.0 2486.9 2062.51 2022.92 1875.0 2555.6000000000004 2151.99 1964.79 1776.83 2252.12 3094.4 3161.2 True False 2906.6279211325405 2167.4829493075154 2309.8004744200703 2334.375084171947 2179.6746253828483 2379.7121534246508 2321.766910346298 2028.701093813658 1742.0184158966276 2395.372890845866 2376.1867953184387 1.2232320821154197 0.9121685860631363 0.9720618256825757 0.9824038618391159 0.9172993594936397 1.0014836199381116 0.9770978085227312 0.8537633059028032 0.7331150982442756 1.008074321246641 1.0 11.214432537503988 -8.218927241590293 5.9458633505407175 0.8689259028299874 0.9906498186941565 0.14852761660142866 0.10509888415232889 0.266840180814584 25.323904205488706 0.019029267959082895 0.024467838990876442 6.0404981883362205e-09 8.218927241590293 0.12172391586416909 INT(ph)LGR ddPTM_A549_PD325901_60min_R1 2 INTLGR 6 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 INT(1)LGR;INT(1)LGR 94.302 0.038063 44847000.0 4596.5 4224.2 4521.8 5590.6 5103.0 4762.5 4672.200000000001 4900.5 5931.0 5239.6 5449.1 True False 5063.133296235541 4580.188158831186 4828.676539792316 5935.918664826186 4744.582884394298 4723.715779001843 4850.003127725944 4802.75568313212 5681.740695608079 4908.770761804269 4778.89524469091 1.0594777740442007 0.958419869931136 1.0104169044418185 1.2421110656109622 0.9928200225073502 0.9884535100972618 1.0148795651283697 1.0049928774788939 1.188923465506004 1.0271768914076205 1.0 12.22246142813654 INVPELPT(ph)PDEDNKLEVQK ddPTM_A549_MK2206_60min_R1 2 INVPELPTPDEDNKLEVQK 19 1 O43264-2;O43264 O43264-2 ZW10 Centromere/kinetochore protein zw10 homolog 1 INVPELPT(1)PDEDNKLEVQK;INVPELPT(1)PDEDNKLEVQK 74.584 0.00019271 3232100.0 1504.4099999999999 1890.38 2051.3 1785.78 2420.7 2088.85 2194.94 1962.06 2955.3 2750.1 2324.1000000000004 True False 1758.3176287068252 1986.5922675341894 2342.2051851669307 2223.29618016671 2064.618236681899 2309.8907205335886 2593.7321862364424 2240.188013556744 2285.9292686443473 2128.850499972599 1746.96182810312 1.0065003141001858 1.1371698199560913 1.3407306029749577 1.272664430556449 1.1818336287998321 1.3222330810981175 1.4847102807350745 1.282333693569697 1.3085170104297281 1.21860161208224 1.0 10.770632369729592 -10.719278247394211 0.9708951646624632 0.9997734945777079 1.266571893262668 0.0837544789993907 0.13232984295451464 0.4557075745084242 0.7622533511928892 0.08371819098305236 0.0216338308715591 1.9086300298208122e-11 10.719278247394211 0.26679839868496 INVPELPT(ph)PDEDNKLEVQK ddPTM_A549_PD325901_60min_R1 2 INVPELPTPDEDNKLEVQK 19 1 O43264-2;O43264 O43264-2 ZW10 Centromere/kinetochore protein zw10 homolog 1 INVPELPT(1)PDEDNKLEVQK;INVPELPT(1)PDEDNKLEVQK 92.95 1.5187e-06 3801400.0 5981.8 6301.799999999999 5789.700000000001 5974.6 7445.3 6202.700000000001 6045.0 6641.6 6476.1 5832.0 6749.0 True False 6589.067932431583 6832.87480216902 6182.623858294393 6343.637472698909 6922.367812890624 6152.1872676986295 6275.045782950923 6509.128077765595 6203.932038244392 5463.766524704651 5918.915785435929 1.1132221121720687 1.1544132489571783 1.0445534422887623 1.0717566700827286 1.1695330806908566 1.0394111845342837 1.0601681136250134 1.0997162848273565 1.0481534563322852 0.9231025956052259 1.0 12.531117214869571 -9.611244247609399 0.14337734159196097 0.9259988547667336 1.1589905766263124 0.5536737487309663 0.04423756490527382 4.616626492186194 0.3256163076622789 0.3153303523790569 0.1763374378577902 2.447686273702954e-10 9.611244247609399 0.23299172185957884 INVYYNEAT(ph)GGK ddPTM_A549_PD325901_60min_R1 2 INVYYNEATGGK 12 0 P68371 P68371 TUBB4B Tubulin beta-4B chain 1 INVYYNEAT(1)GGK;INVYYNEAT(1)GGK 107.65 0.00013476 4541100.0 4542.1 4836.6 4762.4 4601.3 5838.0 4746.0 5079.8 5268.8 5718.3 6311.2 6678.2 True False 5003.2106482827085 5244.197256049176 5085.605102637649 4885.511850689502 5427.959020006645 4707.350149531284 5273.1145687732205 5163.7096507063625 5477.979736923909 5912.709754923872 5856.823736597756 0.854253239177911 0.8953995359770796 0.8683213515303587 0.8341572276046519 0.9267752051489534 0.8037377188110147 0.9003369071571866 0.8816570009508217 0.9353157928748052 1.0095420352121747 1.0 12.515902761291041 -9.214271119478996 0.692068531733012 0.9907800049213169 0.8652206432500276 0.7144473903429156 0.032628532385436684 0.21741327011822978 0.22850173810115917 0.010092837413881624 0.007579809893018687 6.105607476866097e-10 9.214271119478996 -0.12555936167128934 INYTEGR ddPTM_A549_MK2206_60min_R1 2 INYTEGR 7 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7 P06744-2 GPI Glucose-6-phosphate isomerase 0 ; 89.75200000000001 0.034947000000000006 18182400.0 6756.6 8617.2 7225.1 7178.9 10061.4 7929.799999999999 6902.0 7212.700000000001 11906.099999999999 10884.8 11080.4 False True 7896.948896989877 9055.778672962902 8249.72782301448 8937.730822273066 8581.38138825598 8768.926172624777 8156.004059064909 8235.12231296735 9209.387360134828 8425.916120178086 8328.830876517273 0.9481461460881543 1.0872808929876607 0.9905025021307828 1.0731074930903635 1.030322444468258 1.0528399847028147 0.979249570556218 0.9887488934594495 1.1057239001094668 1.0116565272005391 1.0 13.023898282410656 IPAKLS(ph)PTQLR ddPTM_A549_PD325901_60min_R1 1 IPAKLSPTQLR 11 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 IPAKLS(0.5)PT(0.5)QLR 52.5 0.0063005000000000005 105720000.0 3687.4 3674.7 3441.8 3866.2 4292.8 4081.1 3408.9 3699.2 3983.7 4179.2 3883.0 True False 4061.742133479594 3984.3798653607705 3675.3812452247325 4105.006393222729 3991.28853735603 4047.864874684392 3538.627554921656 3625.4165540337394 3816.2789426899217 3915.324598773265 3405.4156163650496 1.1927302247515705 1.170012801437056 1.0792753834693003 1.2054347708678286 1.1720415323684756 1.1886551689115394 1.0391176741882677 1.0646032562402823 1.1206499800935983 1.1497347284007857 1.0 11.733615168384752 -14.999999999957687 0.11113122481787556 0.5352428722256394 1.221238293317047 0.0817293694525314 0.06376953088803701 48.64797947248438 0.3821762881417607 5.126463705263433 0.23552504088130147 1.000000000097429e-15 14.999999999957687 0.6859954210914075 IPAKLSPT(ph)QLR ddPTM_A549_PD325901_60min_R1 1 IPAKLSPTQLR 11 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 IPAKLS(0.412)PT(0.588)QLR 45.992 0.015494999999999998 104700000.0 2635.2 2639.3 2762.8 2682.8 3352.8 2857.2 3024.3 2892.9 2794.0 2786.4 2968.3 True False 2902.723564068294 2861.723073624154 2950.300222066037 2848.5104629191305 3117.3108945320764 2833.931910501642 3139.391391460461 2835.1988400638534 2676.577896396727 2610.466228470001 2603.217917604011 1.115052083976107 1.0993021576380628 1.1333281789875966 1.0942266660260567 1.1974836503127768 1.0886264616332924 1.2059656512928205 1.0891131398916294 1.028180498565497 1.002784365771676 1.0 11.346080370698154 -8.688608969529321 3.0572681129257537 1.0122742137057064 1.1321750316770278 0.6787027364719407 0.03695992522352089 0.0980469448381688 1.8300027361676166 0.006078340207815631 0.0067724901843476855 2.048288046216233e-09 8.688608969529321 0.11990081797132146 IPAMTIAK ddPTM_A549_PD325901_60min_R1 2 IPAMTIAK 8 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 112.17 0.0040425 8188800.0 5870.0 5905.0 5280.7 6035.1 6675.8 6987.0 6498.9 7624.8 7000.2 7055.6 7469.0 False True 6465.918078734391 6402.635073599298 5639.080057428743 6407.874420293436 6206.914838259733 6930.100188532468 6746.219195834535 7472.717382460119 6706.005937851239 6610.108211883771 6550.36034989198 0.9871087594197804 0.9774477634203562 0.8608808914645032 0.9782476196747109 0.947568455277745 1.0579723585202072 1.0299004689025673 1.1408101208635566 1.0237613779464554 1.009121309180002 1.0 12.677358559358304 -7.24652305714465 23.84686249326659 1.0267596709539042 0.9483520296614347 0.45957946093054003 0.048544254140872295 381.3588715121509 609681.0048575714 0.007471446555354325 0.012899765093955386 5.668614754603976e-08 7.24652305714465 -0.07840764129246947 IPAPKES(ph)LR ddPTM_A549_PD325901_60min_R1 2 IPAPKESLR 9 1 Q99661-2;Q99661;Q5JR89;Q5JR91 Q99661-2 KIF2C Kinesin-like protein KIF2C;Kinesin-like protein 1 IPAPKES(1)LR;IPAPKES(1)LR 53.568999999999996 0.0060183 6680800.0 2471.0 2588.5 3340.6 2505.1000000000004 3391.3999999999996 3089.1 3055.0 3027.0 3011.8999999999996 3422.0 3407.1000000000004 True False 2721.8541009459436 2806.641979341539 3567.3132046596966 2659.83433750511 3153.199763694847 3063.9433937878393 3171.2596967601453 2966.624110364439 2885.3203171643877 3205.9343359978266 2988.0482993863916 0.9109136895494253 0.9392893615266844 1.193860623133923 0.8901577454592411 1.05527068098008 1.0253995540892138 1.0613147375868646 0.9928300392512557 0.9656203742613199 1.072919181613021 1.0 11.54498775297734 -11.81579522306907 18.217571712152274 1.000001441822465 0.9959789544561398 0.0 0.08295878039458204 18.460175397652215 97313.12198015502 0.08424496391218281 0.010132916586747046 1.5282865003836783e-12 11.81579522306907 -0.004022487366325156 IPASQT(ph)SVPFDHLGK ddPTM_A549_PD325901_60min_R1 1 IPASQTSVPFDHLGK 15 0 H0Y5S9;H0Y682;P49674 H0Y5S9 CSNK1E Casein kinase I isoform epsilon 1 IPAS(0.028)QT(0.571)S(0.4)VPFDHLGK 69.188 0.0020804 1915100.0 821.4 914.8 848.9 856.68 1048.9 849.4 885.22 664.25 842.29 782.55 1214.8 True False 904.7879233172793 991.893406490879 906.511458850391 909.5951779385571 975.228882508559 842.4827680176729 918.9075315109709 651.0010126559557 806.8914804423757 733.1396594491815 1065.3873012516774 0.8492572816048052 0.9310167347832533 0.8508750365105441 0.8537694947836464 0.9153749827530371 0.7907760558323498 0.8625103100359712 0.6110463414489011 0.7573691553244476 0.6881437938934015 1.0 10.057162274756372 -10.891001889323176 1.212722068397668 0.997430819678862 0.820826256339517 0.0 0.12279302043907504 0.4052630828026185 1.0826130182076656 0.057452862445846006 0.014630845126566202 1.2852810685380282e-11 10.891001889323176 -0.17660456333934504 IPASQTS(ph)VPFDHLGK ddPTM_A549_PD325901_60min_R1 1 IPASQTSVPFDHLGK 15 0 H0Y5S9;H0Y682;P49674 H0Y5S9 CSNK1E Casein kinase I isoform epsilon 1 IPAS(0.023)QT(0.226)S(0.751)VPFDHLGK 51.089 0.006800700000000001 1990500.0 722.17 551.81 475.35 834.82 843.79 767.17 671.65 722.67 684.56 813.16 757.44 True False 795.4841667665451 598.3129652773632 507.61010951176024 886.3849353862183 784.5251013174721 760.9224218744027 697.2100082909828 708.2557799263524 655.7903238215257 761.8169388252464 664.2796818077634 1.1975139215484105 0.9006943636287669 0.764151190249197 1.33435503096229 1.1810162538502973 1.1454850158951677 1.0495729846705582 1.06620117899574 0.9872202052558121 1.1468316127809994 1.0 9.375646977436165 -8.707676355743978 4.720325001938998 0.9938672594026386 1.0771733275497961 0.0 0.1506042704876816 0.47805470622367574 22.16630679231349 0.02514748926264444 0.028187032600119816 1.9603049847343548e-09 8.707676355743978 0.08330606814715746 IPAVTLAVTSVAGS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 IPAVTLAVTSVAGSPAR 17 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 IPAVTLAVTS(0.004)VAGS(0.996)PAR;IPAVTLAVT(0.042)S(0.094)VAGS(0.863)PAR 135.39 2.3927e-12 75954000.0 23608.3 24270.1 24556.6 27308.3 28507.0 26724.8 27332.8 28779.4 27965.3 26404.9 30879.8 True False 26004.99723648811 26315.426502923357 26223.158546831783 28995.071669350833 26504.766663811137 26507.162089379206 28372.964661082064 28205.372289997467 26790.01569295038 24737.69010771158 27081.78036318039 0.9602395739034851 0.97170223486123 0.9682952226613593 1.0706486530985864 0.9786936570775182 0.9787821086318823 1.0476772309865243 1.0414888501327881 0.9892265328823548 0.913444012024565 1.0 14.72503496472166 -6.057358316840615 24.999932763066628 1.00419887775014 0.9669770365921848 0.13625549141469595 0.039930597257851495 284.4624542889023 123984.05160432927 0.0040785611675821475 0.010790887819576265 8.762775456293913e-07 6.057358316840615 -0.03722184115795524 IPCDS(ph)PQSDPVDTPTSTK ddPTM_A549_MK2206_60min_R1 2 IPCDSPQSDPVDTPTSTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCDS(0.993)PQS(0.007)DPVDTPTSTK;IPCDS(0.906)PQS(0.094)DPVDTPTSTK 146.76 7.3051e-17 16932200.0 2012.73 2630.2 2549.38 2378.58 3439.5 2958.84 2252.0699999999997 2333.86 3680.8 3518.6 3237.6 True False 2352.4296174760125 2764.065945507477 2910.9204187397613 2961.332206778512 2933.554106278098 3271.9424848809663 2661.241967733746 2664.691802146488 2847.1046770297808 2723.7458162261705 2433.6145667857054 0.9666401777760062 1.1357862429128325 1.196130421993848 1.2168452010417619 1.205430862518508 1.3444785092663694 1.093534696929715 1.0949522732623955 1.1699078054049492 1.1192182416230634 1.0 11.248884978342806 -10.727436307584018 0.5982095744538091 0.9755609691471051 1.1678939687711136 0.08549583674983019 0.09577467765004075 1.1499375292777396 0.5838451579713594 0.12057976720734198 0.019511309572946507 1.873111768216181e-11 10.727436307584018 0.19233299962400852 IPCDS(ph)PQSDPVDTPTSTK ddPTM_A549_PD325901_60min_R1 2 IPCDSPQSDPVDTPTSTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCDS(0.575)PQS(0.421)DPVDT(0.003)PT(0.001)STK;IPCDS(0.946)PQS(0.054)DPVDTPTSTK 157.42 1.291e-22 28890000.0 4473.3 3744.6 4245.1 4265.7 4622.299999999999 3478.0 4142.5 4845.5 3437.0 4835.6 4301.1 True False 4927.426122930591 4060.170583674845 4533.19801386005 4529.182600892398 4297.645594069323 3449.676321127224 4300.145104362978 4748.852701278785 3292.5548424894596 4530.279390751342 3772.091966919318 1.3062847263914508 1.0763710480237314 1.2017729296145263 1.200708424029067 1.1393268328977744 0.9145260379069146 1.1399894652820257 1.2589440403164909 0.8728723666773431 1.2009991883764273 1.0 11.88114913527769 -7.8116163915377195 0.5587300228129647 0.9451573854698883 1.1993941602634024 0.0 0.13713480903240952 0.6416550301749967 0.4135841981908979 0.031550286198688646 0.06234523865866101 1.5430628248767632e-08 7.8116163915377195 0.25423677479351414 IPCDSPQSDPVDT(ph)PTSTK ddPTM_A549_MK2206_60min_R1 2 IPCDSPQSDPVDTPTSTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCDSPQSDPVDT(0.988)PT(0.01)S(0.001)TK;IPCDSPQS(0.002)DPVDT(0.979)PT(0.016)S(0.002)TK 120.29 3.3766000000000005e-10 6369500.0 1239.49 1709.45 1586.45 1464.07 1722.71 1826.1100000000001 1775.24 1210.82 2201.17 1980.99 2072.8 True False 1448.685609378975 1796.4537033487013 1811.432465269867 1822.7672157245997 1469.3016410601385 2019.347748126287 2097.7781289212376 1382.4574429807333 1702.6085095461967 1533.482983142693 1558.0665536302854 0.929797001292112 1.1530019042915562 1.1626155898470707 1.169890471929818 0.9430288055646113 1.2960600068214154 1.3463982806340509 0.8872903662296171 1.0927700781324967 0.9842217455792804 1.0 10.605541144853477 -9.556332064764858 0.667348919044034 1.0127161184824243 1.125009177056358 0.10147080495860406 0.13749045810403895 1.2011242231613624 1.164221981624329 0.056656519114648356 0.032583676277209 2.7775886908246145e-10 9.556332064764858 0.11229305857393368 IPCDSPQSDPVDT(ph)PTSTK ddPTM_A549_PD325901_60min_R1 2 IPCDSPQSDPVDTPTSTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCDSPQSDPVDT(0.991)PT(0.008)S(0.001)TK;IPCDSPQSDPVDT(0.987)PT(0.011)S(0.002)TK 145.43 9.1681e-17 20734100.0 6562.2 7259.799999999999 6795.5 6291.3 7013.9 7751.0 7813.9 7853.299999999999 7575.700000000001 8158.0 8635.7 True False 7228.389713163686 7871.608824270316 7256.683494661126 6679.899312421022 6521.26786064142 7687.878425835857 8111.262240430151 7696.659770705329 7257.319674206397 7642.902487747013 7573.563646212635 0.954423842041446 1.0393533601855616 0.9581597030996137 0.8820021359114723 0.8610567185109161 1.0150939220904796 1.0709967750104545 1.0162533953952115 0.9582437031258879 1.0091553784682397 1.0 12.886756586848252 IPCES(ph)PPLEVVDTTASTK ddPTM_A549_MK2206_60min_R1 3 IPCESPPLEVVDTTASTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCES(1)PPLEVVDTTASTK;IPCES(1)PPLEVVDTTASTK;IPCES(1)PPLEVVDTTASTK 116.35 5.0132e-10 31879800.0 4129.03 4978.69 4392.18 3569.8500000000004 6073.4 5254.41 4779.37 5240.64 6305.7 6674.75 7899.06 True False 4825.909318908637 5232.0840552956515 5015.057168715686 4444.463410256656 5180.010905384328 5810.428178604924 5647.719663832664 5983.516768786897 4877.469018133742 5166.9193391847975 5937.505399034563 0.8127839883216491 0.8811923027718656 0.8446404393217282 0.7485405252817664 0.8724220960248047 0.9785975402312389 0.9511940258194934 1.007749276280206 0.8214677192422961 0.8702172026698177 1.0 12.53564120485103 -7.003019453048603 24.86319372244751 0.9281800904746047 0.8255166904593659 0.45315502309321276 0.05943757995291552 115.40446533423004 950297.8788934564 0.010816970032568275 0.020172301117347947 9.930715654654835e-08 7.003019453048603 -0.10266340001523877 IPCES(ph)PPLEVVDTTASTK ddPTM_A549_PD325901_60min_R1 2 IPCESPPLEVVDTTASTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCES(1)PPLEVVDTTASTK;IPCES(1)PPLEVVDTTASTK 140.02 8.7751e-14 69471000.0 3894.2000000000003 3917.7000000000003 3966.2 4366.5 5311.200000000001 4129.2 4003.2 4828.3 4042.7 5075.4 4901.2 True False 4289.536317241477 4247.858328169346 4235.370182698103 4636.208787958987 4938.1596346453025 4095.5731642318956 4155.543966635093 4731.995768771927 3872.7993778679465 4754.938377826817 4298.383471266646 0.9979417485470273 0.9882455477890597 0.9853402356979626 1.078593573363242 1.1488411091414623 0.9528170745140647 0.966769017797879 1.1008779929487085 0.9009897334094094 1.1062154899887593 1.0 12.069578480181683 -8.772638015524988 24.999780767750426 0.9532451577587697 1.0259628540551646 0.0 0.07658038874414833 259.23150735490395 578705.7370051392 0.011654481093085743 0.01246232219059833 1.6879593534357826e-09 8.772638015524988 0.07271769629639491 IPCES(ph)PPLEVVDTTASTKR ddPTM_A549_PD325901_60min_R1 1 IPCESPPLEVVDTTASTKR 19 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCES(1)PPLEVVDTTASTKR 169.19 2.1252e-34 27302000.0 5963.8 5271.1 6164.4 5731.0 6215.1 7020.8 6044.1 7673.9 6319.8 6097.0 7221.3 True False 6569.240585682488 5715.314095927059 6582.753253548529 6084.9908539546495 5778.572816931018 6963.624932538817 6274.111532958429 7520.83804444191 6054.200783696504 5712.034379479469 6333.12587959231 1.037282490602473 0.9024475755872671 1.0394161396287118 0.9608195020349676 0.9124361218765177 1.099555743077555 0.9906816400374975 1.1875396427342224 0.9559577527434585 0.9019297086586847 1.0 12.62870203990263 IPCKS(ph)PPPELTDTATSTK ddPTM_A549_MK2206_60min_R1 2 IPCKSPPPELTDTATSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(1)PPPELTDTATSTK;IPCKS(1)PPPELTDTATSTK 171.78 7.0686000000000005e-31 54126000.0 11431.1 12792.599999999999 10927.5 8819.0 12736.2 11468.3 10013.099999999999 9870.900000000001 14824.5 12924.3 14263.900000000001 True False 13360.390216437398 13443.68869838755 12477.183815586031 10979.655395899958 10862.721851542121 12681.867893958575 11832.350658334228 11270.13030336343 11466.77441986198 10004.69165368382 10721.779966387034 1.2460981533217854 1.2538672441081375 1.1637231742026248 1.024051550238987 1.0131453812330549 1.1828136684129362 1.1035808135802874 1.051143591707299 1.0694842139841068 0.9331185386240626 1.0 13.388256812911358 -2.0000000000000004 0.2824605559497849 1.0262001638651157 2.9293101431193986 0.6093864184749831 0.06253165469129994 22.675807213679413 0.2822778393838517 0.021900607420408384 21.72628259313586 0.00999999999999999 2.0000000000000004 1.903109979254283 IPCKS(ph)PPPELTDTATSTK ddPTM_A549_PD325901_60min_R1 2 IPCKSPPPELTDTATSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(1)PPPELTDTATSTK;IPCKS(1)PPPELTDTATSTK 167.99 1.0006e-30 108410000.0 16089.6 17042.0 17407.8 15713.3 17763.699999999997 16675.1 18573.4 17929.8 12993.900000000001 17367.9 19565.9 True False 17723.004347462516 18478.1891489042 18589.19798960518 16683.87485350646 16516.038993438164 16539.30351421178 19280.220900754455 17572.176073344006 12447.811570504446 16271.287829975641 17159.41833845916 1.0328441208138273 1.0768540509027218 1.0833233168481868 0.9722867363232894 0.9625057602576773 0.9638615475177544 1.123594082297182 1.0240542964069905 0.7254215338176903 0.9482423884676228 1.0 14.066713029447339 -8.634345162986548 12.50025909081688 0.8703570352974155 1.0304287719004648 0.3678484598309242 0.07974104265426857 0.40980797493853743 43.85208122036235 0.018139982753391144 0.020568075810001526 2.3208914948487608e-09 8.634345162986548 0.1600717366030493 IPCKS(ph)PPPELTDTATSTKR ddPTM_A549_MK2206_60min_R1 2 IPCKSPPPELTDTATSTKR 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.974)PPPELT(0.014)DT(0.003)AT(0.003)S(0.003)T(0.003)KR;IPCKS(1)PPPELTDTATSTKR 95.835 4.7581e-07 22906000.0 4667.5 5550.7 5760.5 4932.299999999999 6791.8 4996.4 4664.1 4245.299999999999 7357.200000000001 6295.5 6958.1 True False 5455.259890581095 5833.206921043402 6577.42551998933 6140.713721419361 5792.735217043057 5525.115731658103 5511.506596911715 4847.084275685981 5690.805947034203 4873.342177585362 5230.211736209419 1.0430284978356879 1.1152907788912965 1.2575830294695298 1.1740851099595877 1.107552716640364 1.0563847144862275 1.0537826908143806 0.9267472370437706 1.0880641614632984 0.9317676651303802 1.0 12.352653637366807 -7.191347572542107 2.3283059373274724 1.0337452255927997 1.15221086510085 0.4600013604721611 0.06846727407069898 0.234149007193272 2.4812508621890412 0.00999294406115903 0.01845441680836657 6.436539332029748e-08 7.191347572542107 0.11846563950805034 IPCKS(ph)PPPELTDTATSTKR ddPTM_A549_PD325901_60min_R1 1 IPCKSPPPELTDTATSTKR 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(1)PPPELTDTATSTKR 94.449 6.257199999999999e-07 20404000.0 3135.5 3755.5 4509.8 4774.7 4892.4 4539.6 4847.3 4946.1 4551.3 3960.0 4852.6 True False 3453.813651766898 4071.9891649283954 4815.862147630452 5069.6223748695265 4548.7747018637365 4502.631002699583 5031.766654044335 4847.446155359615 4360.024688572089 3709.9649241821726 4255.760963165862 0.8115619466553884 0.9568181108318736 1.131610113752237 1.1912375762519876 1.068851080038081 1.058008436486544 1.1823424054111351 1.1390315850243613 1.0244994317840315 0.8717512464380349 1.0 12.055201404735222 -2.1675480042037276 17.367006564534286 1.0409893065185825 0.005214300053922649 0.0 0.1174582530270379 0.0 0.0 0.014267794093947565 0.0 0.0067991088774014986 2.1675480042037276 -1.0357750064646598 IPCKS(ph)SPELEDTATSSK ddPTM_A549_PD325901_60min_R1 1 IPCKSSPELEDTATSSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.718)S(0.281)PELEDTATSSK 161.8 5.780600000000001e-23 214750000.0 5307.6 5077.1 6353.7 6391.2 5888.1 5584.2 6061.0 5965.1 5796.1 5604.0 5777.7 True False 5846.4236447513895 5504.965035083999 6784.900289901905 6785.9699085316615 5474.540168842262 5538.724126635609 6291.654671706459 5846.12140096958 5552.510073480696 5250.162483615374 5067.079527857933 1.1538053848590213 1.0864177293485622 1.3390159464835096 1.3392270382226221 1.0804133108123093 1.0930801650506283 1.2416727697120251 1.1537457363415373 1.0958008539147548 1.0361318496682128 1.0 12.306938756811642 -9.230537900191669 0.4873367856836239 1.000482839626591 1.2053826010920947 0.3676691371421429 0.08658242533038799 0.6247357494587898 0.3521015093824453 0.04747965966867885 0.030844406506683845 5.881147880573076e-10 9.230537900191669 0.2048997614655037 IPCKS(ph)SPELEDTATSSKR ddPTM_A549_MK2206_60min_R1 1 IPCKSSPELEDTATSSKR 18 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.499)S(0.499)PELEDT(0.001)ATSSKR 42.903999999999996 0.014243 9336100.0 2040.0 2603.8 2067.1 1893.7 2312.2 1673.7 2256.8 1378.5 3304.6 3232.8 3139.3 True False 2384.3021267885256 2736.3222982709926 2360.245862749749 2357.656585011424 1972.0784429528196 1850.8098230878568 2666.8313475076343 1573.9065964791964 2556.113376361825 2502.5082347228895 2359.725169727689 1.0104151777402421 1.1595936397062556 1.0002206583329025 0.999123378966838 0.8357237818421018 0.7843327887634641 1.1301448921763144 0.6669872477822595 1.0832250336410147 1.0605083451356658 1.0 11.204403127571478 -5.915151368446702 8.969356392636534 0.9855743113155088 1.08473799829478 0.08169183216692566 0.13883472531397886 0.6029817230032073 57.72703612113625 0.019112003448245103 0.059696577969788084 1.215762186585662e-06 5.915151368446702 0.09916368697927125 IPCKSS(ph)PELEDTATSSK ddPTM_A549_MK2206_60min_R1 4 IPCKSSPELEDTATSSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.249)S(0.751)PELEDTATSSK;IPCKS(0.019)S(0.981)PELEDTATSSK;IPCKS(0.07)S(0.93)PELEDTATSSK;IPCKS(0.152)S(0.848)PELEDTATSSK 220.48 1.1624e-56 321095000.0 20290.699999999997 22292.6 21741.8 18178.4 28150.199999999997 23303.199999999997 20662.9 20396.0 31697.2 28482.199999999997 29870.300000000003 True False 23715.274100013663 23427.19812060677 24825.11416899642 22632.10881605938 24009.34287034445 25769.129156587762 24417.081465090163 23287.195460130337 24517.83481002725 22048.051238252996 22452.68013165897 1.0562335525625912 1.0434031921014943 1.1056637347268063 1.007991414982455 1.0693308206217458 1.1477083807136457 1.0874907281407944 1.037167737819178 1.0919780919809368 0.981978592709944 1.0 14.454600046425414 -10.857601580401445 0.9751285120676619 0.9976494149956601 1.0731718135862074 0.41915730287934183 0.036157485976222196 0.5286637632391817 0.8451380816887856 0.029147276386212385 0.00624517069400586 1.3880286155096863e-11 10.857601580401445 0.07552239859054732 IPCKSS(ph)PELEDTATSSK ddPTM_A549_PD325901_60min_R1 1 IPCKSSPELEDTATSSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.174)S(0.826)PELEDTATSSK 213.5 1.2259999999999998e-55 256120000.0 9709.0 8569.5 9885.3 7919.1 9174.0 8719.4 8744.8 9276.1 6524.3 8183.2 9386.2 True False 10694.650532611962 9291.681839662864 10556.175903137912 8408.244821418995 8529.649888581867 8648.392097307857 9077.588149338173 9091.080908540327 6250.1063598644105 7666.511355446349 8231.756904024118 1.299194164417544 1.1287604758008098 1.2823721626154307 1.021439884517071 1.0361882630926726 1.050613155629033 1.1027522137954011 1.10439132429872 0.7592676062638619 0.9313335469975496 1.0 13.006984662601287 -6.946846181236436 0.5072966844330137 0.8981846310857704 1.2686027838658065 0.4963076804622092 0.10209606359467101 0.8064672649949794 0.34055399956291293 0.029763498713811645 0.13351301796897388 1.130196137556105e-07 6.946846181236436 0.3704181527800361 IPCKSS(ph)PELEDTATSSKR ddPTM_A549_MK2206_60min_R1 1 IPCKSSPELEDTATSSKR 18 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.166)S(0.833)PELEDTATSSKR 47.391999999999996 0.0045565 11949000.0 1981.9 2491.5 1769.6 2022.4 2498.2 1806.8 2023.8 1652.1 3258.4 3048.0 3045.6 True False 2316.3962671971467 2618.3067079430766 2020.5558892757763 2517.8880907889857 2130.7180893455293 1997.9943767432273 2391.498263508485 1886.2902343440537 2520.3776025955876 2359.4546830720633 2289.293465716132 1.0118389371598266 1.1437182463297793 0.8826111285141464 1.099853788295921 0.9307317394010919 0.8727558989988289 1.0446446903042121 0.8239617430410953 1.1009412468694435 1.0306475418755383 1.0 11.160686699235645 IPEPES(ph)PAKPNVPTASTAPPADSR ddPTM_A549_MK2206_60min_R1 2 IPEPESPAKPNVPTASTAPPADSR 24 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 IPEPES(1)PAKPNVPTASTAPPADSR;IPEPES(1)PAKPNVPTASTAPPADSR 162.58 2.4288999999999995e-34 88894000.0 6506.4 6948.0 6397.799999999999 5568.7 9166.4 7307.0 5910.0 6384.200000000001 9429.5 9486.2 9764.2 True False 7604.521253792579 7301.6235226925455 7305.104242997609 6933.0317499884395 7818.034702656658 8080.221890005951 6983.770499720896 7289.179900792518 7293.733305817295 7343.260831547976 7339.479661789283 1.036111768710683 0.994842122215581 0.995316368410878 0.9446216992851839 1.0652028567309508 1.100925714403585 0.9515348255653222 0.9931466856896362 0.9937670845781953 1.0005151822653555 1.0 12.841462070351023 -3.9776689267335525 2.454605738450399 1.001262645380413 12.560251087439092 0.04014633884469543 0.04256880749773011 1582.7131832434616 32.87633822808583 0.005768741091464064 102205.08022164591 0.00010527641157392862 3.9776689267335525 11.558988442058679 IPEPES(ph)PAKPNVPTASTAPPADSR ddPTM_A549_PD325901_60min_R1 2 IPEPESPAKPNVPTASTAPPADSR 24 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 IPEPES(1)PAKPNVPTASTAPPADSR;IPEPES(1)PAKPNVPTASTAPPADSR 182.09 1.0583999999999999e-50 139721000.0 10830.0 10941.1 11060.6 11651.4 13329.3 10651.900000000001 12288.0 10745.400000000001 11692.1 12931.8 13417.9 True False 11929.453627375386 11863.144894793793 11811.238828790949 12371.080515750686 12393.095951588646 10565.154458026196 12755.626564251608 10531.074567396774 11200.721697372997 12115.283941045209 11767.583363076126 1.0137556080381949 1.0081207439768403 1.0037098072193653 1.0512847144612707 1.0531555689229473 0.8978185352123473 1.0839631359039892 0.8949224528496461 0.9518285404731607 1.0295473222701004 1.0 13.522530452850296 -7.202858898966023 24.999648153731194 0.9737895367368979 1.0251774717034556 0.1785037180029173 0.0528760767407757 324.71536567584286 138574.45478043024 0.007004762820012652 0.012132600609062495 6.268174827989302e-08 7.202858898966023 0.05138793496655769 IPEPS(ph)PVTR ddPTM_A549_MK2206_60min_R1 2 IPEPSPVTR 9 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 IPEPS(1)PVTR;IPEPS(1)PVTR 128.03 3.5058e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IPEPS(ph)PVTR ddPTM_A549_PD325901_60min_R1 1 IPEPSPVTR 9 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 IPEPS(0.998)PVT(0.002)R 47.053000000000004 0.035222 19001000.0 3020.0 3035.8 2729.9 3187.1 3683.1 3293.8 2996.4 3181.8 3312.0 3496.6 3540.6 True False 3326.588176793506 3291.6375201410247 2915.167430222267 3383.959928570731 3424.4117620052166 3266.9763848559105 3110.429641692996 3118.3365029261877 3172.8081577902467 3275.8240792665124 3105.12864571262 1.0713205655381346 1.060064781755798 0.9388233992325438 1.08979701476881 1.1028244406985985 1.0521227161930184 1.001707174350955 1.0042535620003392 1.0217960412593774 1.0549720971430858 1.0 11.600437325309755 -7.755328507147591 24.61424173513889 1.0094196475805381 1.0516531161191027 0.14242386014774422 0.042281409632385046 151.90129795752085 611844.5881019243 0.006218362842226521 0.009087184442320316 1.756594395790376e-08 7.755328507147591 0.04223346853856458 IPESETESTASAPNS(ph)PR ddPTM_A549_MK2206_60min_R1 1 IPESETESTASAPNSPR 17 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 IPESETESTASAPNS(1)PR 124.29 3.8049e-10 3070700.0 1298.7 1387.2 1352.3 1346.0 1792.4 1715.0 1679.2 1659.9 2160.8 1905.3 1875.0 True False 1517.8888098334592 1457.8025547897387 1544.0764743827035 1675.7700604242357 1528.7403343779222 1896.4801616751352 1984.2889040831355 1895.1959082305539 1671.3822500885544 1474.8914067116807 1409.3857526325662 1.0769860607702484 1.0343531230301821 1.0955669670269839 1.1890073794871951 1.0846855316384572 1.345607586945401 1.4079104321699847 1.3446963719411464 1.185894101005782 1.046478158273388 1.0 10.46085081983135 -4.373524461020329 16.49487900331354 1.1409433158132045 1.1239882645295185 0.0 0.13766546260033483 0.0 0.0 0.0206938097793474 0.0 4.23131676754272e-05 4.373524461020329 -0.016955051283686018 IPEVPLHDT(ph)PER ddPTM_A549_MK2206_60min_R1 2 IPEVPLHDTPER 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 IPEVPLHDT(1)PER;IPEVPLHDT(1)PER 99.566 0.0002209 7743800.0 491.32000000000005 668.5699999999999 561.57 495.26 692.4200000000001 611.47 517.1 582.6700000000001 1127.07 877.6 884.8199999999999 True False 574.242804379283 702.5973573066433 641.2090702648044 616.5987222330659 590.565935243228 676.1753495390642 611.0503765491839 665.2652568520374 871.790444560953 679.3495504803288 665.0947742103186 0.8633999644052142 1.0563868256833806 0.9640867664704263 0.927083997863563 0.8879425281072455 1.0166601449273178 0.9187418098040195 1.0002563283434622 1.3107762658277515 1.0214326992524265 1.0 9.377416125186928 -8.542831037401749 24.532843856753132 1.147216595427745 0.9526451509579195 0.3565201791303654 0.09204306659831683 151.34632366712836 186090.71960736654 0.019789081001337812 0.02244013848256826 2.865292497312376e-09 8.542831037401749 -0.19457144446982544 IPEVPLHDT(ph)PER ddPTM_A549_PD325901_60min_R1 2 IPEVPLHDTPER 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 IPEVPLHDT(1)PER;IPEVPLHDT(1)PER 70.529 0.0026796 13117100.0 483.84000000000003 592.28 713.66 589.14 649.0699999999999 498.41 580.34 560.06 596.55 712.56 612.0999999999999 True False 532.9590806158178 642.1935142068404 762.0932591862053 625.5298397659818 603.4815623699405 494.3511142073091 602.4251562742332 548.8891639414292 571.4790780585063 667.5688399937496 536.8155804215933 0.9928159689352781 1.196301928685616 1.4196556265890943 1.1652602170650783 1.1241878670808894 0.9208956152484726 1.122219954571946 1.022491119781497 1.0645724507654746 1.2435720279755442 1.0 9.068282734395476 -6.9074954962975665 3.175928289340641 1.0311062362483039 1.2107659588788666 0.1719054317043045 0.12132975851994313 0.19342305032078475 3.9154406899905103 0.014692690269432263 0.02923867622358169 1.2373840217367378e-07 6.9074954962975665 0.17965972263056273 IPGGNIYIS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 IPGGNIYISPLK 12 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIYIS(1)PLK;IPGGNIYIS(1)PLK 98.902 0.00024989 14024100.0 5770.200000000001 5443.0 5688.0 4286.9 7305.2 5328.6 4961.799999999999 5532.5 8761.0 7157.2 7134.799999999999 True False 6744.068692154479 5720.025451067293 6494.643929815001 5337.190692446254 6230.614757139922 5892.468915161592 5863.2948334204975 6316.7488175706585 6776.647488442162 5540.383549108717 5363.032249537516 1.2575103744222418 1.066565551896609 1.2110022143489945 0.9951815398660915 1.1617708913977205 1.0987196498155931 1.0932798015387886 1.1778315929603793 1.2635850714913286 1.0330692211642947 1.0 12.388833213411994 -5.244399155321912 23.030748694630013 1.1233651690854187 1.2575106981536142 0.19078319366846275 0.08329878471045557 1808.567053689838 2444253.0663728635 0.01365989769640628 0.4713313033864349 5.696404812584716e-06 5.244399155321912 0.13414552906819543 IPGGNIYIS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 IPGGNIYISPLK 12 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIYIS(1)PLK;IPGGNIYIS(1)PLK 105.0 0.00016965 32885000.0 9275.3 9805.400000000001 9746.7 9823.599999999999 11375.8 10092.5 9213.599999999999 10507.2 10994.3 10603.6 10762.0 True False 10216.921627885027 10631.73547005429 10408.1696736684 10430.381460985664 10576.803052379502 10010.310026157716 9564.228589875378 10297.625653261062 10532.247804708137 9934.086886378305 9438.342225938877 1.082491117964172 1.126440980370014 1.102754003246905 1.1051073600955494 1.120620846244784 1.0606004514910397 1.0133377621750708 1.091041774789715 1.115900181682641 1.0525245481221268 1.0 13.204317767931048 -10.875703211417598 0.9433452614623548 0.9956836395067913 1.0923082843899918 0.3126909028295215 0.033850990746170304 0.41181367620690884 0.6010317335263993 0.02883631588316647 0.005811728249115742 1.3313639359411851e-11 10.875703211417598 0.09662464488320055 IPGGNIYIS(ph)PLKS(ph)PYK ddPTM_A549_MK2206_60min_R1 2 IPGGNIYISPLKSPYK 16 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IPGGNIY(0.004)IS(0.997)PLKS(0.999)PY(0.001)K;IPGGNIY(0.005)IS(0.996)PLKS(0.994)PY(0.005)K 69.763 0.00046403 11649300.0 5451.7 5766.0 5727.7 4531.5 8418.0 6371.9 6368.2 6607.8 9121.2 7677.3 8596.1 True False 6371.813678731861 6059.464771422744 6539.973986779421 5641.717703426769 7179.723351257168 7046.170228675096 7525.219508684024 7544.475885538796 7055.2627635633635 5942.992597883579 6461.4511297092295 0.986127349850992 0.9377869846545485 1.0121525111764986 0.8731347788868367 1.111162679579109 1.0904934645837334 1.1646330456766396 1.1676132395167251 1.0919006616213247 0.9197612855970047 1.0 12.657642490220837 -6.7747110165704525 24.99999837198339 1.07074344343678 0.9555388710534127 0.39978119157985703 0.07368052779125843 182.7752751455462 344296.79421452107 0.010169449106869738 0.019297104590235443 1.67992148106337e-07 6.7747110165704525 -0.11520457238336723 IPGGNIYIS(ph)PLKS(ph)PYK ddPTM_A549_PD325901_60min_R1 2 IPGGNIYISPLKSPYK 16 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IPGGNIY(0.008)IS(0.947)PLKS(0.664)PY(0.38)K;IPGGNIY(0.002)IS(0.998)PLKS(0.998)PY(0.002)K 79.467 9.5856e-05 28663000.0 23056.0 22729.0 24986.0 23217.0 27397.0 24134.0 22325.0 24033.0 28160.0 27129.0 26742.0 True False 25396.628147069892 24644.452597432442 26681.700213023756 24651.06136036731 25472.729234518996 23937.460705602192 23174.59009170876 23553.64296147624 26976.53312903787 25416.07031013588 23452.903531505064 1.0828777815486155 1.050806036204717 1.1376715116395435 1.051087824893524 1.0861226287099435 1.0206608607521115 0.9881330923728725 1.0042953926722058 1.150242787329057 1.0837067690144901 1.0 14.517478922810085 -11.256860278815854 1.7644311607614285 0.9998812359329391 1.0754948861110263 0.0 0.05476850405330282 0.49710849276091196 2.7913680361598674 0.0425003389732984 0.008602412248816738 5.5352816160624075e-12 11.256860278815854 0.07561365017808719 IPGGNIYIS(ph)PLKSPYK ddPTM_A549_MK2206_60min_R1 2 IPGGNIYISPLKSPYK 16 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIYIS(0.937)PLKS(0.063)PYK;IPGGNIYIS(0.992)PLKS(0.008)PYK 131.09 1.2003e-10 33999000.0 11401.1 13571.2 11491.8 10353.3 15626.099999999999 12205.9 12009.3 10636.9 16990.5 17710.8 14943.9 True False 13325.326949866987 14261.916112718076 13121.510040901545 12889.858964777293 13327.521389769507 13497.520236379316 14191.234359102897 12144.713149140045 13142.178878253224 13709.917979315198 11232.917199341768 1.1862748307846365 1.2696538093910106 1.1681302201417854 1.1475076986708868 1.1864701887547502 1.2016041778684392 1.2633614320538642 1.0811717858876149 1.1699702441520121 1.2205126892699414 1.0 13.455445025229535 -11.205348805989022 0.31808456634323 0.8835555631692922 1.207539999336479 0.0 0.08101316575742941 1.8736893540460866 0.18684513504614025 0.2224093104095313 0.019183664244646043 6.2323408055600194e-12 11.205348805989022 0.32398443616718686 IPGGNIYIS(ph)PLKSPYK ddPTM_A549_PD325901_60min_R1 1 IPGGNIYISPLKSPYK 16 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIYIS(0.937)PLKS(0.063)PYK 124.86 9.5757e-09 36789000.0 15207.0 13676.0 13722.0 14736.0 18481.0 16842.0 15054.0 15629.0 16777.0 16818.0 17147.0 True False 16750.803445198282 14828.524515926176 14653.257437089258 15646.209252115817 17182.958315988817 16704.84433594731 15626.888207864882 15317.267334286691 16071.921033589064 15756.108609822171 15038.027703788695 1.113896301772211 0.9860684398254076 0.9744135152376068 1.0404429064972327 1.142633771824993 1.1108401091546516 1.0391580941114924 1.0185688998583002 1.0687519234679883 1.0477510030023793 1.0 13.876327743868911 -4.594876211111384 4.827820720204909 1.0392544817402118 7.874272803814258 0.1467038141467969 0.048412714332291454 1700.6867272225588 318.9191084863834 0.0073060491243951645 125797.25176712066 2.541697073535907e-05 4.594876211111384 6.835018322074046 IPGT(ph)PGAGGR ddPTM_A549_PD325901_60min_R1 2 IPGTPGAGGR 10 0 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 IPGT(1)PGAGGR;IPGT(1)PGAGGR 66.55 0.0053178 23598000.0 8862.900000000001 9865.3 8291.3 9750.1 10179.2 11079.0 9520.0 10505.7 11382.8 11925.7 11304.4 True False 9762.65508347786 10696.683453273356 8853.997477637235 10352.341532916289 9464.248108333615 10988.776297230743 9882.288809543892 10296.155571937787 10904.42050075327 11172.70926674731 9914.030464495769 0.984731196705516 1.078943976577481 0.8930774934922042 1.0442111883749203 0.9546317355213988 1.1084065493427588 0.9967983097222114 1.038543870609485 1.0998978205487966 1.126959343806652 1.0 13.275255976686934 -7.246005999129781 24.95179132803147 1.0471822756064266 0.9935010830947967 0.23859710817672564 0.05975380952617814 1120.4998042718114 1811560.3925877886 0.008316315272461912 0.014371410457257025 5.675367656814256e-08 7.246005999129781 -0.05368119251162995 IPGTPGAGGRLS(ph)PENNQVLTK ddPTM_A549_MK2206_60min_R1 4 IPGTPGAGGRLSPENNQVLTK 21 1 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 IPGTPGAGGRLS(1)PENNQVLTK;IPGTPGAGGRLS(1)PENNQVLTK;IPGT(0.051)PGAGGRLS(0.949)PENNQVLTK;IPGT(0.008)PGAGGRLS(0.991)PENNQVLT(0.001)K 226.4 2.5498999999999995e-76 167892000.0 15727.999999999998 16501.8 17163.3 15988.4 22858.4 17000.2 16055.5 16938.499999999996 23371.800000000003 25272.8 25081.8 True False 18382.501887318584 17341.671135113404 19597.314022607905 19905.558717746542 19495.959640339373 18799.149880180536 18972.576524241773 19339.58424698066 18078.124617095356 19563.656927278105 18853.296837535738 0.9750285080495932 0.9198216781155866 1.0394635055865071 1.0558131497784418 1.034087555526317 0.9971279846797193 1.0063267283029542 1.0257932293558734 0.9588839964107996 1.0376782955184838 1.0 14.20252920624096 -8.757481245102596 24.998669661952402 0.9805841097815177 1.0071009192303169 0.0 0.039717048993986724 195.37597254908795 1233950.8583138485 0.0067100720665973475 0.007472677879901004 1.7479087437855832e-09 8.757481245102596 0.026516809448799195 IPGTPGAGGRLS(ph)PENNQVLTK ddPTM_A549_PD325901_60min_R1 4 IPGTPGAGGRLSPENNQVLTK 21 1 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 IPGTPGAGGRLS(1)PENNQVLTK;IPGTPGAGGRLS(1)PENNQVLTK;IPGT(0.074)PGAGGRLS(0.924)PENNQVLT(0.002)K;IPGT(0.044)PGAGGRLS(0.956)PENNQVLTK 133.61 3.4964e-18 333483600.0 15797.2 15204.3 16759.2 17058.3 20601.1 18753.4 18888.3 20265.8 20388.4 19722.6 20241.7 True False 17400.920114716006 16485.61972049548 17896.580093256525 18111.952448789845 19154.149805936773 18600.67852806995 19607.104592574353 19861.582720787457 19531.54645057087 18477.31167012002 17752.099222708337 0.9802176011080929 0.928657479528236 1.0081388048103836 1.0202710238134083 1.078979424666292 1.0478016314981002 1.1044949865699887 1.1188300871696732 1.1002386932124781 1.0408522078608031 1.0 14.115702015948093 -6.190461233353549 1.7939542788264728 1.0598305155527226 0.9550006241005518 0.591348855645594 0.03582485069385972 0.26729271917050107 1.620871654272462 0.0068468944417035835 0.025504800435071823 6.449688894805351e-07 6.190461233353549 -0.10482989145217081 IPGTPGAGGRLS(ph)PENNQVLTKK ddPTM_A549_PD325901_60min_R1 1 IPGTPGAGGRLSPENNQVLTKK 22 2 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 IPGT(0.001)PGAGGRLS(0.998)PENNQVLT(0.001)KK 69.444 0.00012531 7647700.0 3909.6 3464.8 4514.0 4761.2 4467.9 5933.3 5012.2 5938.2 5076.7 5365.8 5851.8 True False 4306.499713904599 3756.7908557166584 4820.347184887106 5055.28851053025 4154.09011741824 5884.9811719793415 5202.9420137810785 5819.757942572215 4863.343953699807 5027.002472266845 5132.065697616533 0.8391357335711138 0.732023141765588 0.939260615296839 0.9850397107889831 0.8094382188730572 1.1467080740436513 1.0138104849666016 1.1339991117563177 0.9476386781171707 0.9795280825421853 1.0 12.32532392372158 -6.004784060256441 1.229396850714278 0.9946043240393218 0.7720529512812596 0.43428791815205725 0.09081650781718886 0.4324899543216198 1.0647906968429501 0.013178193078630183 0.08624365451080708 9.890447448842968e-07 6.004784060256441 -0.22255137275806214 IPHS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 IPHSPAR 7 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 IPHS(1)PAR;IPHS(1)PAR 56.729 0.012459 7528100.0 967.12 1131.6 1165.9 1164.1 1265.5 1357.9 1219.6 1223.4 1240.3 1317.6 1651.5 True False 1065.3013104438849 1226.9639033505453 1245.0249851262463 1236.0038131370802 1176.6156457379939 1346.8417126103107 1266.0125453907278 1198.9983272612667 1188.1745042594348 1234.4065111369778 1448.3759697210614 0.7355143503582486 0.8471308065038131 0.8596006915014076 0.8533722175569639 0.8123689361986549 0.9298978585440734 0.8740911005548826 0.8278225766837173 0.820349501164578 0.8522693947861539 1.0 10.5002204307618 -10.782646373324367 0.8107503010039143 1.010478880387175 0.8420130424117099 0.0541431894910962 0.062288087853898944 0.3844301127215945 0.4023524883296253 0.04228887576344528 0.008367208624961483 1.6495049633612268e-11 10.782646373324367 -0.168465837975465 IPLKPS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 IPLKPSPSK 9 1 A6PW57;Q99755-4;Q99755-3;Q99755;A2A3N6 A6PW57;A2A3N6 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein 1 IPLKPS(0.66)PS(0.34)K 45.357 0.013344 8627800.0 3728.2 4040.7 4566.3 5505.0 5502.4 6045.1 4922.7 5921.2 5822.5 4959.7 4608.9 True False 4106.6841194442195 4381.223969837884 4876.196577392554 5845.0313472378875 5115.930406249497 5995.87070984652 5110.036042304801 5803.0970209084635 5577.800573289166 4646.543695572301 4042.0345182242804 1.0159943219011254 1.0839155257295068 1.20637182968312 1.4460617099840325 1.265682018098399 1.4833793929302181 1.2642237514957464 1.435687150800939 1.379948772861932 1.1495556692112538 1.0 11.980865926780119 -3.9452329566200555 13.350534931563253 1.2298286234051532 1.2299424314686902 0.0 0.1665854759673971 0.0 0.0 0.02593046743427833 0.0 0.00011344021563583845 3.9452329566200555 0.00011380806353700201 IPMTPTSSFVSPPPPT(ph)ASPHSNR ddPTM_A549_MK2206_60min_R1 4 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTS(0.001)S(0.001)FVS(0.003)PPPPT(0.46)AS(0.409)PHS(0.126)NR;IPMTPTSSFVS(0.002)PPPPT(0.433)AS(0.433)PHS(0.132)NR;IPMTPTSSFVS(0.002)PPPPT(0.44)AS(0.44)PHS(0.116)NR;IPMTPTS(0.001)SFVS(0.037)PPPPT(0.415)AS(0.415)PHS(0.131)NR 69.952 9.180200000000001e-05 42098500.0 7130.2 7295.299999999999 7955.800000000001 7689.800000000001 12165.2 8220.5 7264.0 7209.200000000001 12097.3 10866.2 12107.199999999999 True False 8333.603443346834 7666.599609254308 9084.052070468035 9573.801345208238 10375.715195142995 9090.387853673727 8583.774773261006 8231.126177249049 9357.28086541848 8411.517873096347 9100.64809827894 0.915715381294969 0.8424234764889074 0.9981763905568392 1.051991159510802 1.140107285008107 0.9988725808871619 0.9432047784469678 0.9044549452258978 1.0281993946330121 0.9242767968016566 1.0 13.151753574465637 -5.815407758907394 7.240568119958655 1.0111678970874463 0.8793921873977845 0.3285389268557801 0.06412135935533324 0.1385532664239589 15.228290156987557 0.008369517474482608 0.026620308355552087 1.529650598945173e-06 5.815407758907394 -0.1317757096896618 IPMTPTSSFVSPPPPT(ph)ASPHSNR ddPTM_A549_PD325901_60min_R1 7 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMT(0.001)PT(0.003)S(0.023)S(0.022)FVS(0.024)PPPPT(0.406)AS(0.35)PHS(0.171)NR;IPMTPT(0.001)S(0.004)S(0.003)FVS(0.037)PPPPT(0.462)AS(0.398)PHS(0.095)NR;IPMTPTS(0.001)S(0.001)FVS(0.009)PPPPT(0.473)AS(0.389)PHS(0.127)NR;IPMTPTSSFVS(0.001)PPPPT(0.429)AS(0.429)PHS(0.141)NR;IPMTPTSSFVSPPPPT(0.434)AS(0.434)PHS(0.131)NR;IPMTPTSSFVSPPPPT(0.442)AS(0.442)PHS(0.115)NR;IPMTPTSSFVS(0.002)PPPPT(0.444)AS(0.444)PHS(0.11)NR 70.983 7.4107e-05 109290800.0 18691.5 17707.5 18086.5 18248.199999999997 22384.700000000004 21995.6 20561.4 22926.4 21812.3 21316.2 22895.9 True False 20589.04732004497 19199.77316947665 19313.95865295983 19375.349869330872 20812.475895022722 21816.475126217927 21343.875328629812 22469.114966587138 20895.60488531651 19970.291494154557 20079.8494490684 1.0253586498378948 0.956171171411219 0.9618577421085146 0.9649150965237834 1.036485654327867 1.086485990921117 1.0629499679650267 1.1189882186905336 1.040625575322028 0.9945438856405906 1.0 14.293460832110213 -6.767136896814145 24.4454854146689 1.0368156595973121 0.9744954893108445 0.42542438694981244 0.03841606302362099 95.63923965675617 410348.19134719466 0.006210004366676051 0.011974946587446947 1.709476374884984e-07 6.767136896814145 -0.062320170286467635 IPMTPTSSFVSPPPPTAS(ph)PHSNR ddPTM_A549_MK2206_60min_R1 1 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTSSFVS(0.004)PPPPT(0.19)AS(0.617)PHS(0.19)NR 68.444 0.00010896 10410000.0 1344.6 1580.8 1183.4 1104.7 1751.7 1344.6 1412.7 1482.6 2127.7 1804.3 2202.1 True False 1571.5356076861997 1661.2559678572811 1351.2239146524382 1375.3515495918682 1494.0272504629588 1486.884679526755 1669.3693037150106 1692.7630902720757 1645.779347238715 1396.7073768592268 1655.2577951318276 0.9494204542084878 1.0036237090941933 0.8163223388081519 0.8308986996689134 0.9025949038614688 0.8982798231790456 1.008525263330392 1.022658280329839 0.9942737331181952 0.8438005131085884 1.0 10.69284020912344 -7.758534641562796 24.813881540055124 1.0002985511021725 0.8980390514972204 0.1837134644044539 0.06748069864999393 44.51120606205066 380236.2119209196 0.007742500147133479 0.011204880962296352 1.7436742674859634e-08 7.758534641562796 -0.10225949960495206 IPMTPTSSFVSPPPPTAS(ph)PHSNR ddPTM_A549_PD325901_60min_R1 1 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTSSFVSPPPPT(0.03)AS(0.788)PHS(0.182)NR 107.31 7.506399999999999e-11 16543000.0 3034.1 2704.1 3341.4 2923.2 4209.4 3928.4 2911.4 3161.0 3560.3 3602.7 3449.0 True False 3342.1195984136334 2931.9839970397757 3568.1674974704874 3103.759424931118 3913.746265641652 3896.408412856869 3022.1949201792104 3097.9513752434705 3410.672972276758 3375.2249071593696 3024.794865012377 1.1049078524536433 0.9693166405939988 1.1796394984477359 1.0261057570654193 1.2938881611152289 1.288156250834195 0.9991404558162802 1.0241856104284262 1.127571661710951 1.1158524983629126 1.0 11.562621589937129 -11.058781174514811 0.514621981496939 0.9625380592862454 1.1178113746189418 0.0 0.10865346036770047 3.198439220101036 0.9314438228269928 0.2590054656142361 0.02444997516259532 8.734113383289715e-12 11.058781174514811 0.1552733153326964 IPNSYEVLFPES(ph)PAR ddPTM_A549_MK2206_60min_R1 1 IPNSYEVLFPESPAR 15 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 IPNSYEVLFPES(1)PAR 60.549 0.0055549 5654700.0 802.34 811.55 621.33 566.63 1081.8 1072.8 744.16 830.33 1144.5 1304.2 1329.5 True False 937.7553766703448 852.8544285896855 709.4439368691903 705.4543754369876 922.6686530517941 1186.3229839329933 879.3642394369376 948.0318202789774 885.2725773909432 1009.5803141937615 999.3484576666657 0.9383667623402033 0.8534104616331499 0.7099064709877468 0.705914308492677 0.9232702026739423 1.1870964275092655 0.8799375560053658 0.9486499058521537 0.8858497460014365 1.0102385273611025 1.0 9.964844001418413 -6.926965659566457 8.078918296491725 0.95855119672872 0.7999893794240931 0.4165096224924033 0.0987093182144399 0.2231419969429529 21.801826095345966 0.014659402760916212 0.027774133183809592 1.1831351046138794e-07 6.926965659566457 -0.15856181730462693 IPNSYEVLFPES(ph)PAR ddPTM_A549_PD325901_60min_R1 2 IPNSYEVLFPESPAR 15 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 IPNSYEVLFPES(1)PAR;IPNSYEVLFPES(1)PAR 149.97 6.1177e-14 12651700.0 3704.4 3612.8 3776.8 4159.2 4911.6 4602.9 3641.6 4114.2 4316.3 4413.1 4171.299999999999 True False 4080.467960964851 3917.263335122705 4033.1163597433833 4416.104337771446 4566.62616010014 4565.415508486631 3780.1830807599827 4032.1390534725397 4134.900921337577 4134.456112855644 3658.2565440493277 1.115413288223952 1.070800608966227 1.1024695264480067 1.2071609206726808 1.2483067015976241 1.2479757648251666 1.0333291378673226 1.1022023756183488 1.1302927696701803 1.1301711793780354 1.0 11.836940535760153 -10.54606911318015 0.4740364466256716 0.9742155227490509 1.1490161177705616 0.041971221210300724 0.07535724072782157 1.332069477123326 0.4327751987240439 0.10762613261301728 0.018781544026323815 2.844008478829719e-11 10.54606911318015 0.17480059502151069 IPNTKDFDS(ph)SEDEKHSK ddPTM_A549_PD325901_60min_R1 1 IPNTKDFDSSEDEKHSK 17 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 IPNT(0.088)KDFDS(0.456)S(0.456)EDEKHSK 57.496 0.0015795 2702200.0 1781.2 1672.0 2101.8 2052.2 2474.3 2217.7 1802.0 2330.6 2615.6 2168.7 1974.0 True False 1962.0261127498636 1812.905307884511 2244.440787150138 2178.959733115639 2300.513703871606 2199.6397864760916 1870.5760960922353 2284.1143546796693 2505.675427994015 2031.7679118873432 1731.2105142169994 1.133326130263978 1.0471894047526975 1.2964574606718264 1.2586336064976766 1.3288468877582424 1.2705790361208358 1.0805018111493325 1.3193741234368255 1.4473545576444784 1.1736111207748072 1.0 10.757565450932672 -5.756408058143082 24.98170869198106 1.232891605424137 1.0902577447615172 0.1935311204142538 0.1181254097800368 221.3258095697174 1098895.6489875242 0.0227679154120639 0.08300187839715452 1.752233349665023e-06 5.756408058143082 -0.14263386066261985 IPNYQLS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 IPNYQLSPTK 10 0 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 IPNYQLS(0.99)PT(0.01)K;IPNYQLS(0.992)PT(0.008)K 163.45 5.521699999999999e-09 38395000.0 10126.5 10893.3 11385.6 9577.1 16424.9 11955.3 12082.7 13289.2 18461.7 14450.5 15132.0 True False 11835.605630845099 11447.722440953761 13000.249283984118 11923.489929932355 14008.818967933466 13220.401910714141 14277.970188997904 15172.984796468143 14280.154427276862 11186.122013691884 11374.306778045866 1.0405562169019047 1.0064545175666968 1.1429487121867126 1.0482827800061183 1.231619582739988 1.1623039688213368 1.2552826706376998 1.3339700689060279 1.2554747032882674 0.9834552761740867 1.0 13.473491000610121 -6.016000124077136 1.3551727173951906 1.157423514577924 1.0190171846310911 0.18788063373873243 0.10621734612578625 0.832736123178612 2.614595309624849 0.018377629387221258 0.107038511451666 9.638287482598274e-07 6.016000124077136 -0.13840632994683277 IPNYQLS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 IPNYQLSPTK 10 0 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 IPNYQLS(0.934)PT(0.066)K;IPNYQLS(0.996)PT(0.004)K 174.29 1.1992e-10 47284000.0 16346.0 16014.0 16118.9 15364.6 19655.1 16538.699999999997 15638.7 16969.4 19235.7 18272.699999999997 17739.0 True False 18005.4338867108 17363.555981137895 17212.825484819845 16313.636446461636 18274.593582413934 16404.0143105885 16233.839286325012 16630.93200476324 18427.290422948638 17118.958603561514 15557.215456785894 1.1573686780083141 1.116109501045966 1.1064207172956386 1.0486218752820446 1.1746699551199407 1.0544312609255047 1.0434926051785174 1.0690172705366114 1.1844851332254864 1.100387061625119 1.0 13.925296238962073 -11.092753224895123 1.4327881669804223 1.0001709603277364 1.112862412704021 0.019830865748866056 0.055837981824827305 0.3518744392863098 1.293969291590942 0.03757775941133837 0.008273918040360323 8.076938482274658e-12 11.092753224895123 0.11269145237628453 IPNYQLS(ph)PTKLPSINK ddPTM_A549_MK2206_60min_R1 1 IPNYQLSPTKLPSINK 16 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 IPNYQLS(0.97)PT(0.03)KLPS(0.001)INK 200.74 5.972099999999999e-40 266170000.0 10122.0 11911.0 11984.0 9991.1 14886.0 11789.0 11386.0 10866.0 16216.0 14531.0 15704.0 True False 11830.346140859536 12517.219024005612 13683.51140205747 12438.919948517518 12696.289119364965 13036.504155095137 13454.688817228787 12406.288775729374 12543.101891630866 11248.437007782206 11804.263391648978 1.0022096041358253 1.0603981467290047 1.1592007860260032 1.0537650284318065 1.0755680975694815 1.104389466971562 1.1398160453406534 1.0510006735792006 1.0625908178653982 0.952913081873453 1.0 13.527020397026916 -9.950961552985703 0.6747586685550507 1.0027803567243903 1.084057129412311 0.42011299046036177 0.044139688868326664 0.5649642349384312 0.5207181672587579 0.0219089804689626 0.00914810013690902 1.1195369889157123e-10 9.950961552985703 0.08127677268792066 IPNYQLS(ph)PTKLPSINK ddPTM_A549_PD325901_60min_R1 3 IPNYQLSPTKLPSINK 16 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 IPNYQLS(0.5)PT(0.5)KLPSINK;IPNYQLS(0.987)PT(0.013)KLPSINK;IPNYQLS(0.86)PT(0.14)KLPSINK 192.94 1.7996999999999999e-35 953539400.0 36594.6 32535.2 35912.4 36180.7 41038.2 38882.6 40212.5 41829.7 41131.0 38434.3 42941.4 True False 40309.65685247935 35277.055486294325 38349.63142280453 38415.49966666847 38155.81840610423 38565.95299708496 41742.80869262432 40995.373818735156 39402.407106905426 36007.551738761336 37659.880027962456 1.070360734621285 0.93672777130732 1.0183152839130112 1.0200643134854641 1.013168878333482 1.0240593695054192 1.1084158701947613 1.088568890508841 1.046270117633119 0.9561249720398932 1.0 15.200740783555247 -7.321939973209457 4.231800217912626 1.0354655318196668 1.0082241370672906 0.0656813570799838 0.047778016330075834 0.5044349543424799 18.4635585589877 0.00684890111365031 0.011266467631343056 4.764968421195879e-08 7.321939973209457 -0.02724139475237619 IPNYQLSPT(ph)KLPSINK ddPTM_A549_MK2206_60min_R1 1 IPNYQLSPTKLPSINK 16 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 IPNYQLS(0.384)PT(0.614)KLPS(0.003)INK 144.01 1.0306e-14 221280000.0 4049.9 4105.9 4962.6 3479.2 5012.5 4299.6 4272.0 3852.5 6397.2 6096.6 6703.3 True False 4733.424109451393 4314.872772283151 5666.371302056949 4331.604156187222 4275.167890018599 4754.580818156508 5048.167102336323 4398.603672786436 4948.244414229221 4719.373825727412 5038.685608331673 0.939416442578692 0.8563488789910472 1.124573299966835 0.859669464001631 0.8484688711177838 0.9436152972701082 1.0018817395530635 0.8729664866395244 0.9820506375803831 0.9366279606577822 1.0 12.298831725996362 -8.968833523627538 22.33341657520121 0.9920813041165576 0.93219981340494 0.04076366557185229 0.07787914575631459 89.43268222007264 64087.0946892071 0.012693184921753942 0.013376135159098086 1.0744011793367492e-09 8.968833523627538 -0.059881490711617635 IPNYQLSPTKLPSINK ddPTM_A549_MK2206_60min_R1 1 IPNYQLSPTKLPSINK 16 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 0 73.464 0.00059434 2561600.0 1806.0 1991.5 2107.4 2424.1 3254.5 2162.9 2043.0 2301.7 2997.1 3243.6 3388.4 False True 2110.8086475392515 2092.8588436157465 2406.2610087363087 3018.004608821984 2775.7673612100793 2391.7766423831777 2414.1866549796605 2627.9730236606197 2318.2616353852304 2510.8685072219637 2546.9667649174344 0.8287539031188254 0.8217063812701896 0.9447555586043593 1.1849407108065737 1.089832580245727 0.9390686503365946 0.9478673566664785 1.0318049924557267 0.9102049022851627 0.9858269616263953 1.0 11.314564418831857 -5.828572314628087 4.7564738151178965 0.9840749313917546 0.8244608566285012 0.4403163411843599 0.07586243841936757 0.16054064912959254 6.904356285758296 0.011700976902971243 0.03977857413601059 1.4839787613200635e-06 5.828572314628087 -0.1596140747632534 IPPLVHSKT(ph)PEGNNGR ddPTM_A549_PD325901_60min_R1 1 IPPLVHSKTPEGNNGR 16 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4;E5RGW7;E5RG47;E7EWM2;E7EMW0;Q96L14 H0Y2V6 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein 1 IPPLVHS(0.047)KT(0.953)PEGNNGR 58.693000000000005 0.0036444000000000003 5607600.0 2691.9 2681.8 2471.3 2920.6 3159.3 3456.4 2347.0 2986.1 2879.9 2921.2 3031.4 True False 2965.1797063279587 2907.8046977779195 2639.0172791341383 3100.9988288361437 2937.401666993317 3428.2522243657672 2436.3163693276806 2926.539892949868 2758.8678181220234 2736.7549334648907 2658.557017627868 1.1153342533814372 1.0937529940104298 0.9926502465946117 1.166421787561679 1.104885713383816 1.2895161554310652 0.9164055362263833 1.1008001233545524 1.0377312955219817 1.0294136688882436 1.0 11.376427692653976 -7.7889125962249715 24.999946469774102 1.018899584955357 1.1202454092708143 0.3319908069170252 0.07749632011643548 203.06495714639684 184783.3364020298 0.011581441430770147 0.016003997776788677 1.6258759378853342e-08 7.7889125962249715 0.10134582431545724 IPPS(ph)TPR ddPTM_A549_PD325901_60min_R1 1 IPPSTPR 7 0 B1AK81;A6NEM5;Q92643-2;Q92643 B1AK81 PIGK GPI-anchor transamidase 1 IPPS(0.5)T(0.5)PR 70.85600000000001 0.020950999999999997 10667000.0 2963.6 2645.9 2853.5 2654.1 3952.0 3357.1 3467.4 3763.6 3386.2 3317.3 4083.5 True False 3264.462490312989 2868.879278786858 3047.1556694894466 2818.037729101559 3674.4251536598586 3329.7608906429573 3599.353804434083 3688.5320455129145 3243.889789827698 3107.8451118660396 3581.2553874392715 0.9115413834385039 0.8010820141029404 0.8508624322568278 0.7868854421791345 1.0260159514307094 0.9297747662234884 1.0050536515933182 1.0299550427065045 0.9057968334805628 0.8678088479158317 1.0 11.806249688842575 -6.758555761666698 24.99949903234694 0.9661831679779106 0.8359327282932093 0.5500258844394161 0.05601192945435082 40.459531800831655 350757.1036656055 0.007383564319649868 0.014855812057678965 1.743589473209738e-07 6.758555761666698 -0.1302504396847013 IPPST(ph)PR ddPTM_A549_PD325901_60min_R1 1 IPPSTPR 7 0 B1AK81;A6NEM5;Q92643-2;Q92643 B1AK81 PIGK GPI-anchor transamidase 1 IPPS(0.305)T(0.695)PR 54.776 0.04413 12137000.0 3268.2 2795.2 2509.8 2887.3 2982.8 3252.0 2861.2 3073.8 2975.4 3407.6 3483.8 True False 3599.98525807832 3030.7613137552516 2680.1301206534463 3065.6419634659314 2773.2984181013726 3225.5167901971618 2970.0845317087173 3012.490647650547 2850.3542852322194 3192.443554455344 3055.3146856277544 1.178269876753679 0.9919637175221255 0.8772026440552321 1.0033801028374447 0.9076964906911257 1.0557068983335958 0.9721042960582879 0.9859837553955891 0.9329167625974267 1.0448820769502551 1.0 11.577105264383313 -5.2744704746258 4.529833288174045 0.9678264041111149 1.1899039479810718 0.5525696136559015 0.05174281305370072 0.08363764236695964 4.322234539195338 0.006095028525694499 0.057584460378556815 5.315321343238425e-06 5.2744704746258 0.22207754386995693 IPQNPS(ph)PHTHQQQNAPVTVIQSK ddPTM_A549_MK2206_60min_R1 1 IPQNPSPHTHQQQNAPVTVIQSK 23 0 F8W108;F8WCU9;Q68CP9-3;Q68CP9 F8W108 ARID2 AT-rich interactive domain-containing protein 2 1 IPQNPS(0.793)PHT(0.207)HQQQNAPVTVIQSK 85.84899999999999 1.2252e-05 3347100.0 980.97 925.85 1135.7 1248.4 1409.5 1131.4 1129.8 1162.7 1814.5 1377.4 1590.6 True False 1146.5337535861463 972.9718103749127 1296.759337392913 1554.258056042805 1202.1644171533592 1251.1239970374618 1335.0700356319226 1327.5162856194138 1403.5186471610896 1066.2443833541547 1195.6101216732586 0.9589528666598859 0.8137868630730868 1.084600501355823 1.2999706408202851 1.005481967207611 1.046431419706042 1.116643303222868 1.1103253991874478 1.1738932464011451 0.8917993951589701 1.0 10.223531300261797 -5.777009891469052 23.48005537999236 1.0949882278617549 0.8863699691102831 0.33372201525741296 0.10456405554102892 68.94500859972565 103969.16717668322 0.0127869370570234 0.040001749028400695 1.67105255406922e-06 5.777009891469052 -0.20861825875147177 IPQNPS(ph)PHTHQQQNAPVTVIQSK ddPTM_A549_PD325901_60min_R1 3 IPQNPSPHTHQQQNAPVTVIQSK 23 0 F8W108;F8WCU9;Q68CP9-3;Q68CP9 F8W108 ARID2 AT-rich interactive domain-containing protein 2 1 IPQNPS(0.818)PHT(0.182)HQQQNAPVTVIQSK;IPQNPS(0.986)PHT(0.014)HQQQNAPVTVIQSK;IPQNPS(0.959)PHT(0.041)HQQQNAPVTVIQSK 110.08 1.6609e-10 15993900.0 4914.03 4513.1 5365.89 4649.129999999999 5893.0 6048.02 5834.6 5786.049999999999 6067.360000000001 5006.26 6100.72 True False 5412.8987080823135 4893.434775725829 5730.051563117829 4936.2962011596865 5479.096009746341 5998.766930334643 6056.638895815629 5670.642693681582 5812.369959012753 4690.163889226322 5350.370115650423 1.0116867788732946 0.9145974334396031 1.070963585557716 0.9226083606291975 1.0240592503534252 1.1211872824998756 1.1320037240226226 1.059859892139859 1.086349137232755 0.8766055035159296 1.0 12.385422979081353 -6.995029073726086 24.97192707468209 1.0566109470825442 0.9807373085929503 0.13430842564709566 0.07580354812606388 143.45126412006516 720629.6739165962 0.008380544445716285 0.015800590658958436 1.0115117366148903e-07 6.995029073726086 -0.07587363848959394 IPRPLS(ph)LIGSTLR ddPTM_A549_MK2206_60min_R1 2 IPRPLSLIGSTLR 13 1 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 IPRPLS(1)LIGSTLR;IPRPLS(0.99)LIGS(0.009)T(0.001)LR 96.773 4.6118e-05 84738000.0 2094.4 2444.8 2107.0 2371.6 2864.5 2242.7400000000002 1895.1799999999998 2624.9 3309.6 3192.8 2806.9 True False 2447.8835168362198 2569.2298774149026 2405.8042827215527 2952.6421064651695 2443.135844580205 2480.0652581896757 2239.509674392731 2996.987613419109 2559.980884345185 2471.544262504097 2109.8692635009893 1.1602062550427177 1.2177199421122795 1.1402622543206808 1.3994431586560647 1.15795603398014 1.175459210242442 1.0614447601727817 1.420461288888625 1.2133362614597778 1.171420573425941 1.0 11.042937890825687 -10.49147772745331 0.8650973125976757 1.0026170797735994 1.2161998021306788 0.10248691659187426 0.11274534227356403 0.47103225733796805 0.6464138007599564 0.06097410297370682 0.0185483998070871 3.224944704539324e-11 10.49147772745331 0.21358272235707942 IPRPLS(ph)LIGSTLR ddPTM_A549_PD325901_60min_R1 4 IPRPLSLIGSTLR 13 1 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 IPRPLS(0.999)LIGS(0.001)TLR;IPRPLS(0.998)LIGS(0.001)TLR;IPRPLS(0.828)LIGS(0.147)T(0.025)LR;IPRPLS(1)LIGSTLR 148.82 9.1645e-13 270798000.0 42186.5 40302.4 41340.50000000001 40584.1 48588.4 44790.4 43725.0 45506.3 44904.7 45790.2 46955.799999999996 True False 46469.24242394014 43698.824689285124 44146.11493062153 43090.88768382148 45175.718404880245 44425.64183260981 45388.97880223806 44598.64114749824 43017.51161930066 42898.99895739556 41180.53427734074 1.128427380542983 1.0611524463229234 1.0720141373909415 1.0463897188320817 1.0970163257385863 1.0788019779785776 1.1021949957364439 1.0830029753168668 1.0446079045402454 1.0417300239108456 1.0 15.329674927204652 -9.390503649040587 0.8647106801758854 1.0079800179136893 1.0826055902101503 0.4917197206868118 0.023928015785278603 0.21598441435990393 0.34474819813736857 0.0065709385573523285 0.004788453468431678 4.0690811486070353e-10 9.390503649040587 0.07462557229646105 IPRPLS(ph)PTK ddPTM_A549_MK2206_60min_R1 4 IPRPLSPTK 9 1 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 IPRPLS(0.623)PT(0.377)K;IPRPLS(0.902)PT(0.098)K;IPRPLS(0.778)PT(0.222)K;IPRPLS(0.998)PT(0.002)K 84.68700000000001 0.0011075 452430000.0 17009.9 17392.6 17204.1 16631.3 23492.7 16839.5 17488.7 17372.2 24169.699999999997 22859.0 22354.9 True False 19880.7552678726 18277.809050198975 19643.900076112906 20705.969246607427 20036.9549505915 18621.444712844564 20666.170412600473 19834.762550131218 18695.301541079833 17695.13602373501 16803.561366147074 1.1831274831968017 1.0877342398988088 1.1690319479350406 1.232236952359531 1.1924231128145555 1.108184408476637 1.2298684762288024 1.1803904016496698 1.1125797165084248 1.0530586723945392 1.0 14.036479411408697 -9.741608472211546 0.7116554393342854 1.0092916187831733 1.172873915687887 0.5943392487000567 0.045165162923041464 0.26610404138111265 0.2848644178999626 0.019606353701589856 0.010135547549130274 1.8129737992009078e-10 9.741608472211546 0.1635822969047136 IPRPLS(ph)PTK ddPTM_A549_PD325901_60min_R1 6 IPRPLSPTK 9 1 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 IPRPLS(0.989)PT(0.011)K;IPRPLS(0.86)PT(0.14)K;IPRPLS(0.89)PT(0.11)K;IPRPLS(0.982)PT(0.018)K;IPRPLS(0.823)PT(0.177)K;IPRPLS(0.983)PT(0.017)K 93.84299999999999 0.00044004 820707100.0 30110.9 27821.0 29368.1 29290.1 33431.3 32200.1 30762.3 31936.7 31944.300000000003 31544.9 33228.3 True False 33167.73640152699 30165.573307807994 31361.195870731714 31099.282954356484 31083.200819723897 31937.87306150913 31932.976160276452 31299.69746464352 30601.79216029562 29553.149630513704 29141.42975154849 1.1381643482940145 1.0351439021692161 1.0761721761117529 1.0671845279898786 1.066632663006942 1.0959610881759172 1.0957930490208576 1.074061833324439 1.0501129292968039 1.0141283348989882 1.0 14.830784040921243 -9.659627310260433 0.6829401498849105 1.0041751851506535 1.0802670961837213 0.5646828451307802 0.024686828892324538 0.30728284198788397 0.3073090076173176 0.010198390766369298 0.0054822055664701915 2.1896398570215653e-10 9.659627310260433 0.07609191103306778 IPS(ph)PNILK ddPTM_A549_MK2206_60min_R1 2 IPSPNILK 8 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 IPS(1)PNILK;IPS(1)PNILK 61.161 0.010962999999999999 64677000.0 4164.4 5035.299999999999 4474.9 4136.6 6102.1 4548.0 4697.8 4655.3 6823.7 5982.6 6521.7 True False 4867.24891019516 5291.575262494787 5109.508108567004 5150.067185699032 5204.489173402991 5029.266341281935 5551.3294506918455 5315.203031258323 5278.142845209768 4631.126504903851 4902.1819002367 0.9928739914690122 1.0794326628800301 1.0422926387779068 1.0505663173066595 1.0616679020318878 1.0259240566000005 1.1324201271323289 1.0842525102958094 1.076692573352881 0.9447071934805681 1.0 12.259208302465487 -3.8351889220644675 16.676988100785984 1.048019300947208 0.4731021551552088 0.0 0.04952438961596616 0.0 0.0 0.005644882715348969 0.0 0.0001461541252363044 3.8351889220644675 -0.5749171457919993 IPS(ph)PNILK ddPTM_A549_PD325901_60min_R1 4 IPSPNILK 8 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 IPS(1)PNILK;IPS(1)PNILK;IPS(1)PNILK;IPS(1)PNILK 67.726 0.0078734 131415000.0 9663.19 8769.310000000001 9808.55 9821.8 12287.8 11054.96 11295.5 10692.1 10467.3 10973.8 11714.2 True False 10644.189935135502 9508.330529596122 10474.217186602664 10428.470279073768 11424.747318608703 10964.93207102031 11725.356433634772 10478.837677709815 10027.395782016261 10280.912395199575 10273.427662432001 1.0360894420913975 0.9255265956041433 1.019544550345637 1.015091615158661 1.1120677240359478 1.0673099992826163 1.141328563251796 1.0199943020019462 0.9760516267306352 1.000728552632433 1.0 13.326629987355043 -4.172673197170266 16.075067144481103 1.0129507500866708 1.02851119916195 0.0 0.05970736952938149 0.0 0.0 0.00848715947638094 0.0 6.719342874562243e-05 4.172673197170266 0.015560449075279204 IPS(ph)TPK ddPTM_A549_PD325901_60min_R1 3 IPSTPK 6 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 IPS(0.929)T(0.071)PK;IPS(0.5)T(0.5)PK;IPS(0.989)T(0.011)PK 84.368 0.040547 347432000.0 9359.1 10241.7 9753.1 9593.5 12069.099999999999 10755.000000000002 10292.699999999999 12665.3 12242.7 12156.599999999999 12587.5 True False 10309.228942194737 11104.804002249279 10415.004016154726 10186.068706580692 11221.408052134657 10667.414845808888 10684.394330881549 12412.68065576436 11728.181894136082 11389.030201341659 11039.31729873682 0.9338647185523308 1.0059321334590094 0.9434463866118304 0.9227082102030204 1.0164947476796118 0.9663111003276907 0.96784919227787 1.1244065479651253 1.0624010141893545 1.031678852336716 1.0 13.430363334257784 -8.065148611116037 24.999548938797115 1.037826071263978 0.96620853478927 0.5285678431541565 0.039464484436418416 154.06231757657298 59118.14350481067 0.006883602458956743 0.008886697364431907 8.606991793587947e-09 8.065148611116037 -0.07161753647470792 IPS(ph)TPRYPR ddPTM_A549_PD325901_60min_R1 1 IPSTPRYPR 9 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 IPS(0.5)T(0.5)PRYPR 42.001000000000005 0.058287 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IPSIVS(ph)SPLNSPLDR ddPTM_A549_PD325901_60min_R1 1 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IPSIVS(0.926)S(0.074)PLNSPLDR 179.65 3.9831999999999996e-28 16303000.0 4145.6 4106.9 3403.2 4342.5 4622.3 4799.7 4676.9 5150.1 4799.4 4130.7 4839.2 True False 4566.45826017058 4453.002876166804 3634.161617104078 4610.726362466946 4297.645594069323 4760.612834535461 4854.88198879788 5047.377215324707 4597.697908363078 3869.8868970503286 4244.009078216262 1.0759774958091846 1.049244427638779 0.8563039216286265 1.0864082233313255 1.0126381718004251 1.1217254126459892 1.1439377011979353 1.1892946321043443 1.0833383773758252 0.9118469884793047 1.0 12.051212026938227 -7.127549178010831 23.535101293865065 1.066652681484501 1.0129760084390036 0.09277655160025233 0.08942035292963263 18.906264373982488 3427.177708371027 0.012570596380748398 0.021772914185888784 7.455054487794856e-08 7.127549178010831 -0.05367667304549739 IPSIVSS(ph)PLNSPLDR ddPTM_A549_MK2206_60min_R1 1 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IPSIVS(0.014)S(0.986)PLNSPLDR 165.16 3.8237999999999996e-20 13551000.0 2860.2 3488.3 3012.1 3195.2 4185.7 3854.0 3646.3 3913.9 5231.7 4487.8 4958.1 True False 3342.9318348237907 3665.8395702660387 3439.2610726082557 3978.024143437978 3569.9890747632617 4261.82772192185 4308.785511528307 4468.707310816049 4046.7283033081685 3474.0028630875363 3726.866933401351 0.8969818065848787 0.9836250222436529 0.9228290502632436 1.0673909786758624 0.9579062356017863 1.1435416928160251 1.1561414959336538 1.1990520162568972 1.0858258090837962 0.9321510333391386 1.0 11.863747593680786 -6.265183972682173 24.28664539111122 1.063814346187924 0.9393932624908297 0.3541251968319463 0.07995502058149932 187.95286533649536 1219031.3938645304 0.011124116572694192 0.026806054760396297 5.430202524582359e-07 6.265183972682173 -0.12442108369709426 IPSIVSS(ph)PLNSPLDR ddPTM_A549_PD325901_60min_R1 1 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IPSIVS(0.211)S(0.789)PLNSPLDR 236.4 2.1577999999999994e-64 24922000.0 4657.6 4791.5 5150.0 5274.5 6570.7 5823.1 5418.7 5976.5 7111.7 5100.5 6026.4 True False 5130.436123256101 5195.296520770714 5499.509969465797 5600.293885741367 6109.1966996844185 5775.678604242652 5624.911593726417 5857.294019026451 6812.81998060293 4778.4535595432235 5285.1910044971255 0.9707191507157746 0.9829912516596049 1.0405508457095136 1.0596199609391834 1.1559084041591219 1.0928041388339937 1.0642778262772765 1.1082464217551509 1.289039502036153 0.9041212617438569 1.0 12.367739895581568 -6.115527935206743 0.9638426911595999 1.131145222982713 0.9536972450050932 0.04822831458328103 0.09633222354885988 0.8679533281743036 1.2213527003744737 0.01629553622914717 0.11682360709125243 7.664292394029565e-07 6.115527935206743 -0.1774479779776198 IPSLGWS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 IPSLGWSPSK 10 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 IPSLGWS(0.968)PS(0.032)K;IPS(0.036)LGWS(0.828)PS(0.136)K 84.605 0.00089323 30060000.0 7507.900000000001 6755.7 6394.4 5845.9 11148.3 8943.6 7736.099999999999 7602.3 10967.3 9570.3 10513.4 True False 8775.049969468415 7099.536274072264 7301.222071872194 7278.145762432423 9508.39983806371 9890.0058157188 9141.649232299626 8679.949306067318 8483.224061179286 7408.362583137983 7902.632624921193 1.1103957865630787 0.8983760995903642 0.9238974425873685 0.9209773638572756 1.2031939594507632 1.2514824217603593 1.15678529753125 1.0983617381750523 1.0734681040881464 0.9374550146460668 1.0 12.948117626840016 -6.726302075921115 24.999960057802806 1.0761255696103995 0.9559437764546586 0.2902434048919086 0.09924610331479039 211.63275501876078 150574.33978321753 0.014830910960866502 0.03087206333351734 1.8780101021298118e-07 6.726302075921115 -0.12018179315574096 IPSLGWS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 IPSLGWSPSK 10 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 IPS(0.291)LGWS(0.668)PS(0.041)K;IPS(0.001)LGWS(0.929)PS(0.069)K 77.279 0.0014134 47857000.0 12818.0 11440.099999999999 11056.4 10981.0 14652.8 13109.6 11222.1 11560.4 16883.1 13623.3 14935.099999999999 True False 14119.27392388714 12404.197376034443 11806.753791534287 11659.271430339559 13623.637877415778 13002.839764074026 11649.163156468749 11329.818753041645 16173.562019561768 12763.122513033079 13098.177381399348 1.0779571472239982 0.947017055491215 0.9014043288420415 0.890144566746884 1.0401170697812228 0.9927213065948618 0.889372835415381 0.8649920079057 1.234794853406838 0.97441973347818 1.0 13.677078453468274 -8.752704239752205 24.99991678950885 1.1108753506989113 0.9490652075177546 0.22482625235378328 0.09018057860935187 156.1516345371252 446904.72731908265 0.01735759165201328 0.01953631383579209 1.7672409252621913e-09 8.752704239752205 -0.16181014318115672 IPST(ph)PK ddPTM_A549_MK2206_60min_R1 1 IPSTPK 6 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 IPS(0.285)T(0.715)PK 76.774 0.047697 119090000.0 4286.6 4276.8 3613.9 3636.7 4726.7 3261.8 4253.4 3503.4 6210.0 6020.1 5679.2 True False 5010.073282692005 4494.470852310231 4126.405361807036 4527.691663257669 4031.4086914216255 3606.9615109923952 5026.187723098619 4000.0176787125247 4803.444915332248 4660.155228858967 4268.8979020538 1.1736221848457935 1.0528410272234212 0.966620766409473 1.0606230851947434 0.9443675590091024 0.8449397464523708 1.1773970327752465 0.9370141358471199 1.125218973501632 1.0916530064157615 1.0 12.059647943157202 -7.803126193832696 24.999936589149158 1.057595099119457 1.0069756477889944 0.08192314604130646 0.09653036034298385 358.64776054386516 215082.89835874928 0.015268107409944264 0.021096053133325916 1.5735255754984345e-08 7.803126193832696 -0.05061945133046253 IPST(ph)PK ddPTM_A549_PD325901_60min_R1 1 IPSTPK 6 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 IPS(0.28)T(0.72)PK 77.072 0.047512 268650000.0 4535.8 3735.2 3739.6 4531.6 4759.3 4384.2 4802.1 4759.0 5315.2 4702.2 5494.0 True False 4996.271076920523 4049.9784126855407 3993.39174404161 4811.506639989684 4425.023186693663 4348.496528776876 4984.846543309946 4664.078011636722 5091.820628105895 4405.30228951753 4818.2728293354585 1.0369423347099285 0.8405456801922356 0.8288014991032342 0.9985957230764146 0.9183836912995994 0.9025011000418226 1.0345712498803148 0.967997906478035 1.0567729990516466 0.9142907522165187 1.0 12.23430037155213 -7.762136590889298 24.999933946852753 1.02267317151732 0.9165289326833922 0.17369330648769765 0.06839636988724519 13.636457395859559 488971.5196731237 0.009146427244745554 0.013052768168473363 1.729272396506503e-08 7.762136590889298 -0.10614423883392787 IPSTENSSQEISVEERT(ph)PTK ddPTM_A549_MK2206_60min_R1 2 IPSTENSSQEISVEERTPTK 20 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 IPSTENSSQEIS(0.003)VEERT(0.995)PT(0.002)K;IPSTENSSQEIS(0.007)VEERT(0.986)PT(0.007)K 176.68 3.9295e-35 154529000.0 7255.6 8728.7 7329.5 5953.9 9795.3 7866.599999999999 7222.200000000001 6245.1 11330.0 10451.9 11291.1 True False 8480.167897611187 9172.953546707899 8368.93331286551 7412.60576728073 8354.424345755442 8699.038390573534 8534.380254328971 7130.362049816635 8763.77309029217 8090.808530840189 8487.208251493112 0.9991704747104931 1.080797510193549 0.9860643293857208 0.8733856349025804 0.9843548194172907 1.0249587535504572 1.0055580117086864 0.8401304455516602 1.0325860790266816 0.9532944510247894 1.0 13.051074362106844 IPSTENSSQEISVEERT(ph)PTK ddPTM_A549_PD325901_60min_R1 2 IPSTENSSQEISVEERTPTK 20 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 IPSTENSSQEISVEERT(0.996)PT(0.004)K;IPSTENSSQEISVEERT(0.99)PT(0.009)K 235.87 1.3937999999999996e-85 179900000.0 31459.0 32151.0 33059.0 32518.0 39274.0 33745.0 35553.0 36140.0 36480.0 36127.0 40233.0 True False 34652.69452110825 34860.47760394431 35302.58253991643 34526.563006263714 36515.52972794464 33470.1919081191 36905.98887034809 35419.159348718444 34946.872462617255 33845.935054527596 35284.59605800029 0.9820912917395079 0.9879800677508447 1.0005097545083577 0.9785166011114161 1.0348858654332038 0.9485780098800424 1.0459518598337525 1.0038136554120376 0.9904285826362335 0.9592269385454253 1.0 15.10675087350096 -5.333385543599164 1.1104465113056021 0.9982156849164111 0.9748311935175424 0.017410447787524763 0.027143116578066697 4.0503343187807 4.3175821353464325 0.0032232749347875815 0.10692963710106963 4.641030861935129e-06 5.333385543599164 -0.023384491398868668 IPTYNT(ph)PLK ddPTM_A549_MK2206_60min_R1 4 IPTYNTPLK 9 0 H7BYN4;Q02241 H7BYN4;Q02241 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 IPT(0.01)Y(0.017)NT(0.973)PLK;IPT(0.007)Y(0.002)NT(0.991)PLK;IPT(0.004)YNT(0.996)PLK;IPT(0.002)YNT(0.998)PLK 118.28 0.00017776 14886300.0 9198.400000000001 11250.0 10147.2 8993.18 12266.400000000001 10177.9 8704.2 9833.0 13728.4 13278.9 14376.400000000001 True False 10750.865040711557 11822.576947364872 11586.225542302871 11196.509503719193 10462.028809201818 11254.918622456767 10285.640471010262 11226.857862299557 10618.939319749952 10279.187267403422 10806.343111544982 0.9948661568246749 1.0940404931927614 1.0721689495426718 1.0361053122362343 0.9681377595742527 1.0415103894334568 0.9518150927506247 1.038913696003722 0.9826579824589489 0.9512179246299914 1.0 13.399590774277431 -6.575164437275922 5.703354115836008 0.9947147199811297 1.0572943457138329 0.38274600345159415 0.03597696540545305 0.1257850240897847 8.926543583015313 0.004262036538756239 0.00904206641815838 2.659717817985333e-07 6.575164437275922 0.06257962573270315 IPTYNT(ph)PLK ddPTM_A549_PD325901_60min_R1 2 IPTYNTPLK 9 0 H7BYN4;Q02241 H7BYN4;Q02241 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 IPT(0.146)YNT(0.854)PLK;IPT(0.03)Y(0.003)NT(0.967)PLK 105.13 0.00061556 24974000.0 5315.0 5496.0 4993.5 4985.1 6419.2 5816.4 6003.9 5968.3 5791.6 5456.700000000001 6000.9 True False 5854.5748873038 5959.167208213676 5332.388938354843 5293.018305016458 5968.337537037793 5769.033166821273 6232.3816999601395 5849.257574459225 5548.199192831522 5112.163030753753 5262.8273428393095 1.1124390951699437 1.1323128843133754 1.0132175332732851 1.0057366431027281 1.134055356225663 1.096185147451344 1.1842268981976052 1.1114287422744016 1.0542240570328598 0.9713719827251122 1.0 12.361622349886956 -9.357300384842842 1.3387116957064693 1.0144655449318158 1.0965105582560228 0.3864153922125183 0.05135545961762619 0.33689484735238007 1.250353441838148 0.012584846324810203 0.01047657244016424 4.3923770646709207e-10 9.357300384842842 0.082045013324207 IPTYNT(ph)PLKVTSIAR ddPTM_A549_PD325901_60min_R1 1 IPTYNTPLKVTSIAR 15 1 H7BYN4;Q02241 H7BYN4;Q02241 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 IPTYNT(0.945)PLKVT(0.027)S(0.027)IAR 61.102 0.0021181 3814500.0 1829.2 1782.2 2685.0 2484.4 2593.6 3300.4 2197.3 2465.8 2869.3 2839.5 3216.9 True False 2014.899037414131 1932.3922486314434 2867.2202462166315 2637.8557455182213 2411.4344834342623 3273.5226366441325 2280.919453908697 2416.6176846173207 2748.7132992595302 2660.2134854078986 2821.2416936092523 0.714188735399144 0.6849438858814355 1.0162972753137496 0.9349981433684177 0.8547422537022278 1.1603127247337222 0.8084806980825121 0.856579459353484 0.9742920308763282 0.9429229305074717 1.0 11.462114550456201 -5.756974998033066 24.99930147341161 0.9674433621332573 0.6995661937649329 0.5173303410403116 0.09196600930715591 56.12898612176748 314294.42195464706 0.01200370055944354 0.04351647441805965 1.7499474287220116e-06 5.756974998033066 -0.2678771683683244 IPVEGPLS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 IPVEGPLSPSR 11 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.973)PS(0.027)R;IPVEGPLS(0.996)PS(0.004)R 126.12 1.9059e-06 19017000.0 2605.7 2907.2 2451.0 2164.7 3798.0 2799.0 2709.4 2489.3 3590.1 3694.3 3530.5 True False 3045.4784567514016 3055.1640623448143 2798.5886554107865 2695.0515971770747 3239.3192311801777 3095.188322174172 3201.6629089583384 2842.1658981615246 2776.948082211643 2859.755064197221 2653.7794131569485 1.1476004530189967 1.1512501932895685 1.0545671737205815 1.0155522285746532 1.2206437411942495 1.1663321777344415 1.2064540455341106 1.0709879969942455 1.0464125497560373 1.0776159653734154 1.0 11.373832740987938 -8.638859824206538 2.605552594399956 1.0205487820534453 1.1344895345263755 0.32236758037990476 0.05992355577782712 0.2009068019937316 2.7259811356024324 0.010848848171937112 0.012250130578672419 2.2968898880341726e-09 8.638859824206538 0.11394075247293012 IPVEGPLS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 IPVEGPLSPSR 11 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.999)PS(0.001)R;IPVEGPLS(0.999)PS(0.001)R;IPVEGPLS(0.958)PS(0.042)R 194.39 8.891500000000002e-24 29380600.0 4429.7 5253.299999999999 5168.4 4636.700000000001 5729.6 5245.2 5291.7 5624.3 5410.9 5350.7 5626.1 True False 4879.399883027212 5696.014027457954 5519.158704113985 4923.09842829027 5327.172662046947 5202.484830240519 5493.078539229348 5512.118924322006 5183.498689911611 5012.855888843828 4934.125366786353 0.9889087772014225 1.1544121002275682 1.1185688027437921 0.9977651685605092 1.0796589600066424 1.054388456616973 1.1132831314351155 1.1171420494149515 1.050540532432332 1.015956327860545 1.0 12.268578656916096 -9.665483236540233 1.022409235829628 1.0088901219137525 1.0787067228819383 0.21949468202588984 0.04863597255503508 0.4393758504788672 0.9521617783787891 0.014218944486461587 0.009414374604845049 2.1603134197351568e-10 9.665483236540233 0.06981660096818576 IPVEGPLS(ph)PSRGDFPK ddPTM_A549_MK2206_60min_R1 2 IPVEGPLSPSRGDFPK 16 1 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.849)PS(0.151)RGDFPK;IPVEGPLS(0.984)PS(0.016)RGDFPK 139.11 1.8395e-11 15446800.0 4046.2000000000003 4786.4 4371.1 4058.9 6268.200000000001 3819.2 4540.1 3428.1 7342.4 7441.1 6991.7 True False 4729.099639907708 5030.007315632644 4990.987707738105 5053.330682210946 5346.156083434332 4223.345209020216 5364.977401993712 3914.043673115945 5679.35812340346 5760.150341931606 5255.4679288965945 0.8998436873537539 0.9570998022793973 0.9496752287832878 0.9615377261510398 1.0172559619361576 0.8036097386873263 1.0208372450519567 0.7447564567172068 1.08065698435265 1.096029967238516 1.0 12.359603507202417 IPVEGPLS(ph)PSRGDFPK ddPTM_A549_PD325901_60min_R1 2 IPVEGPLSPSRGDFPK 16 1 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.974)PS(0.026)RGDFPK;IPVEGPLS(0.978)PS(0.022)RGDFPK 128.14 1.5743e-10 26871000.0 3866.0 3543.0 3493.4 4040.6000000000004 4069.5 4133.3 4711.799999999999 5304.0 5118.4 5114.9 5552.9 True False 4258.473474001219 3841.5810441595804 3730.483131520739 4290.178685131593 3783.672359012852 4099.639775191246 4891.110127395889 5198.207559092494 4903.2914477154645 4791.944341085703 4869.9285027333235 0.8744427092946199 0.7888372574676267 0.7660242094780133 0.8809531151686648 0.7769461824520025 0.841827507917264 1.0043494734369667 1.0674094201126194 1.0068508079663625 0.9839865900282004 1.0 12.249684876372323 -7.734363570691822 4.679038918940163 1.009645738111367 0.8162535722880291 0.8576288631063327 0.038826119782849326 0.04954817104723723 2.582534850927049 0.005624161563090706 0.00824608806343498 1.8434715063267397e-08 7.734363570691822 -0.19339216582333796 IPVHPNDHVNK ddPTM_A549_PD325901_60min_R1 1 IPVHPNDHVNK 11 0 P07954-2;P07954 P07954-2 FH Fumarate hydratase, mitochondrial 0 49.5 0.027780000000000003 1272500.0 301.94 268.35 459.11 484.58 382.48 397.19 606.85 524.74 483.55 551.81 400.65 False True 332.5927265235202 290.964796274407 490.26796545270713 514.511406038971 355.6159242843681 393.95541632792475 629.9440088310619 514.2736490494333 463.22807509042127 516.968622427516 351.3725899296052 0.9465528503237903 0.8280805179843411 1.3952937124404852 1.464290103397221 1.0120764523937766 1.1211899494119637 1.7928091913978443 1.4636134513294392 1.318338676284412 1.4712832965459448 1.0 8.456857842945178 -5.751574497833351 24.992975566583944 1.2388648999274694 0.8873165410147901 0.2816660334900086 0.23785822870460435 234.5008929788263 594102.2760393899 0.03535414753897195 0.13363771516600592 1.7718440811830312e-06 5.751574497833351 -0.3515483589126793 IPYAPS(ph)GEIPK ddPTM_A549_MK2206_60min_R1 1 IPYAPSGEIPK 11 0 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 1 IPYAPS(1)GEIPK 80.979 0.00082632 2589600.0 1731.4 1585.2 1376.1 1965.1 2750.9 1618.7 1645.8 2326.2 2928.2 2451.1 2762.5 True False 2023.617991334143 1665.8799090633602 1571.2516722606226 2446.54958821669 2346.246254095194 1789.9897595939008 1944.820556419737 2655.945973688722 2264.9673753745374 1897.3948076371178 2076.49500887865 0.9745354468378609 0.8022556769654696 0.7566845407970091 1.178211157626561 1.1299070038999108 0.8620245904470206 0.9365881199348416 1.27905242359479 1.0907646614559725 0.9137487928091625 1.0 11.019934688726902 -6.2546612551981156 24.99408129454324 1.053547963311029 0.840268264769385 0.34447549865072535 0.125350366034494 427.1208879819141 1574986.9660718348 0.01659514062696011 0.04283783198148438 5.56338025471835e-07 6.2546612551981156 -0.21327969854164397 IPYAPS(ph)GEIPK ddPTM_A549_PD325901_60min_R1 2 IPYAPSGEIPK 11 0 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 1 IPYAPS(1)GEIPK;IPYAPS(1)GEIPK 102.4 0.00023121 9023200.0 5018.8 5240.6 6135.4 5846.2 6441.7 6123.9 6196.299999999999 6085.5 5935.0 6363.7 6902.9 True False 5528.304881354715 5682.2437538873 6551.785139157362 6207.306496316462 5989.257214658578 6074.028988772573 6432.10358724546 5964.119928517607 5685.572589518458 5961.894895964165 6053.887061088415 0.9131826916442001 0.9386107960966324 1.0822443618529334 1.025342302173781 0.9893242398185378 1.003327106614463 1.0624749887701153 0.9851719842697778 0.939160663578065 0.9848044464331795 1.0 12.563646045733114 -8.51759566039668 24.907784265409187 0.9707911553855727 1.0046434009792147 0.059020994056228515 0.04748840884090841 441.0649925837937 2079464.0553371902 0.008502511614376443 0.009780714227890274 3.0367171321207448e-09 8.51759566039668 0.03385224559364197 IPYKDTFWKGT(ph)TR ddPTM_A549_MK2206_60min_R1 1 IPYKDTFWKGTTR 13 2 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 IPYKDT(0.001)FWKGT(0.979)T(0.02)R 54.004 0.0071785 8681400.0 1740.7 2149.1 1640.4 1479.0 3059.1 2266.1 2044.2 1650.2 3685.0 3374.9 3257.3 True False 2034.4876039709725 2258.480010451721 1873.0333865099365 1841.3550663948333 2609.110442365265 2505.897197884562 2415.6046794466088 1884.1209035255488 2850.3533837358023 2612.507746030153 2448.422513093367 0.8309381216236964 0.9224224979038972 0.7649959827168569 0.752057725555073 1.0656291667032922 1.0234741693820568 0.9865963356114972 0.769524415598159 1.1641591140797962 1.0670167146639569 1.0 11.257636823471739 -7.21790532493446 0.6626064473964803 1.0618201570411538 0.8176729856308463 0.2921156792311346 0.11404628447407299 0.6614848719983141 0.5508633960505004 0.02506776750685781 0.0749460414614533 6.054728518722608e-08 7.21790532493446 -0.2441471714103075 IPYKDTFWKGT(ph)TR ddPTM_A549_PD325901_60min_R1 1 IPYKDTFWKGTTR 13 2 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 IPYKDT(0.018)FWKGT(0.888)T(0.094)R 41.422 0.033026 12077000.0 2782.5 2785.6 3506.0 3111.0 2465.9 3490.3 2928.5 3394.1 4914.1 3847.4 4512.0 True False 3064.977351631764 3020.3522880640508 3743.938243290696 3303.159404406371 2292.70369089318 3461.8761540052747 3039.94567003669 3326.4020128800607 4707.577466243073 3604.4745073986082 3957.052603924571 0.7745606789740287 0.7632833298876267 0.9461431570501463 0.8347524622569651 0.5793968188897201 0.8748623029604953 0.7682348389863956 0.8406261795915888 1.1896676484851725 0.9108988098423865 1.0 11.950210528875068 -8.664230693924072 5.998933676864204 1.0891725041899873 0.7943648610708867 0.46606550093487076 0.10867070274707337 0.10016692042442646 5.219840958087081 0.01798515673472095 0.020364546755004213 2.1665529426654725e-09 8.664230693924072 -0.2948076431191007 IPYPGRS(ph)PQDLASTSR ddPTM_A549_MK2206_60min_R1 2 IPYPGRSPQDLASTSR 16 1 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 IPYPGRS(1)PQDLASTSR;IPYPGRS(0.999)PQDLASTSR 105.96 2.351e-07 48265000.0 3909.8 4533.0 4810.4 4197.0 5047.9 3540.5 3648.1 3623.6000000000004 6154.9 6266.3 6759.4 True False 4569.678654567535 4763.710337991559 5492.587053442696 5225.265188410492 4305.3605969126975 3915.1533600063053 4310.912548228732 4137.2563968095865 4760.824977355627 4850.73847786564 5080.854430050441 0.8993917691363909 0.9375805592494147 1.0810360991562924 1.0284225341127549 0.8473694053206628 0.7705698743995382 0.8484621253331075 0.814283592212366 0.9370126703882684 0.9547092018964777 1.0 12.31085541519157 -5.271342898952733 7.054488320457983 0.941267388080783 0.8989101183965688 0.0 0.09218597639979437 0.5348208137251377 193.38087840539424 0.013968709670761068 0.10229620296557386 5.353737840728044e-06 5.271342898952733 -0.04235726968421427 IPYPGRS(ph)PQDLASTSR ddPTM_A549_PD325901_60min_R1 2 IPYPGRSPQDLASTSR 16 1 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 IPYPGRS(1)PQDLASTSR;IPYPGRS(1)PQDLASTSR 140.95 9.476399999999999e-15 83529000.0 11243.6 11839.7 14108.3 14113.6 16465.9 18504.9 16902.1 16551.9 17227.8 15202.2 16197.699999999999 True False 12385.041994899151 12837.47307043077 15065.774078099854 14985.365017688775 15309.39198827122 18354.202229680035 17545.318664683997 16221.75936978564 16503.7754772883 14242.330497576319 14205.485585680184 0.8718492528959286 0.9036982926772713 1.0605603016687357 1.054899878452219 1.0777098674968089 1.2920503223192847 1.2351086880388324 1.1419362803153985 1.1617889003333266 1.0025937101321813 1.0 13.794160527520347 -5.774634056009328 1.5233965556561364 1.1098295035711714 0.8492616125757021 0.5193336895401282 0.08537695641304256 0.3837807625395347 1.4535212408941844 0.014436168845710001 0.11228966564518574 1.6802192033723465e-06 5.774634056009328 -0.2605678909954693 IQAQFGPLAQLS(ph)PQER ddPTM_A549_MK2206_60min_R1 2 IQAQFGPLAQLSPQER 16 0 P51692 P51692 STAT5B Signal transducer and activator of transcription 5B 1 IQAQFGPLAQLS(1)PQER;IQAQFGPLAQLS(1)PQER 89.541 1.1363e-05 2915600.0 1354.35 1285.7 1204.97 1264.31 1865.15 1383.9099999999999 1192.9 1215.98 2162.6 1608.55 1882.8 True False 1582.9311693215868 1351.1366383312916 1375.8528649980967 1574.0660067570316 1590.788905749264 1530.3544376348905 1409.634488852293 1388.34888878257 1672.774552962563 1245.1774378135065 1415.2487973635177 1.1184826104572188 0.9546990188921826 0.9721632461805924 1.112218579298125 1.1240348048433333 1.081332441677961 0.9960329883186027 0.9809928059073006 1.181965005784702 0.8798293558935792 1.0 10.466839982362636 -6.262567330735175 24.97115275164589 1.0775285354214807 1.0090733663883793 0.0 0.0912704777402419 172.9657219734126 3829286.5096236877 0.011677652459850016 0.02866717997595142 5.463018475473388e-07 6.262567330735175 -0.06845516903310145 IQAQFGPLAQLS(ph)PQER ddPTM_A549_PD325901_60min_R1 2 IQAQFGPLAQLSPQER 16 0 P51692 P51692 STAT5B Signal transducer and activator of transcription 5B 1 IQAQFGPLAQLS(1)PQER;IQAQFGPLAQLS(1)PQER 139.65 4.1468e-11 6302400.0 2748.7 2385.1 2166.2 2622.3 2989.8 3200.5 2778.7 2627.8 2650.9 2609.5 2879.6 True False 3027.746000514008 2586.100747509178 2313.2113584187978 2784.2735153245985 2779.8067622500635 3174.436189122394 2884.4449490629845 2575.3864675307796 2539.4918917530717 2444.735724659945 2525.427455288385 1.1989043653476326 1.0240249594553745 0.9159682467119794 1.1024959396454552 1.1007272279506561 1.2569896563351874 1.1421610797106039 1.0197823984758612 1.0055691310535313 0.9680482880395289 1.0 11.302311884578543 -8.391261265208058 5.581640444316765 1.0031538892937826 1.100699323253942 0.27592278276647153 0.08372102000302861 0.2756129640365445 11.491798969416259 0.01444195968735233 0.017472827253924787 4.061988923354565e-09 8.391261265208058 0.09754543396015936 IQDPTEDAEAEDT(ph)PR ddPTM_A549_MK2206_60min_R1 2 IQDPTEDAEAEDTPR 15 0 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 IQDPTEDAEAEDT(1)PR;IQDPTEDAEAEDT(1)PR 238.05 1.9640999999999996e-64 60038000.0 2999.7 3646.3 3284.3 2997.0 4650.5 3718.0 4251.1 4032.5 5169.3 4583.200000000001 5159.6 True False 3505.9760243762435 3831.8810953934726 3750.0631256489805 3731.2651345404447 3966.4176104800963 4111.436292191343 5023.469842870306 4604.119224013314 3998.461803675841 3547.8519368293596 3878.328922284264 0.9039914083180156 0.9880237525435479 0.966927561017765 0.9620806304233728 1.0227130524411399 1.0601051057241897 1.2952665809251618 1.1871399554480213 1.0309754236422064 0.9147888195980397 1.0 11.921219448711502 -6.874027860907211 3.03358147790367 1.055246810666799 0.9573727778556649 0.24992875290309702 0.09644967289910646 0.3741613489020721 6.911973804524535 0.015084864563426125 0.03055928461036841 1.3365097738746607e-07 6.874027860907211 -0.09787403281113405 IQDPTEDAEAEDT(ph)PR ddPTM_A549_PD325901_60min_R1 2 IQDPTEDAEAEDTPR 15 0 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 IQDPTEDAEAEDT(1)PR;IQDPTEDAEAEDT(1)PR 208.43 2.8137e-45 86303000.0 4032.8 5012.4 4136.3 3710.3 4629.0 4287.7 4432.4 4940.3 5124.799999999999 4652.9 4888.7 True False 4442.206887209554 5434.812539019327 4417.0141915925005 3939.4768042973205 4303.875009183065 4252.782392782404 4601.077407502345 4841.761840909622 4909.422477972063 4359.11509993112 4287.420892022619 1.0361023559583191 1.267618149907232 1.030226400167758 0.9188453626345153 1.0038377657745385 0.9919209006737207 1.0731573884111378 1.1292947351911347 1.1450759329709779 1.0167219896795994 1.0 12.065894336766299 -11.208545650310985 1.6663985292711567 1.0001104054301424 1.0774050308448657 0.04801171268791382 0.08813738795704297 0.8321610635066155 4.170569285607715 0.06897793648705368 0.014444857518144501 6.186632941316261e-12 11.208545650310985 0.07729462541472332 IQDPTEDAEAEDT(ph)PRKR ddPTM_A549_MK2206_60min_R1 2 IQDPTEDAEAEDTPRKR 17 2 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 IQDPTEDAEAEDT(1)PRKR;IQDPTEDAEAEDT(1)PRKR 130.37 1.6274e-12 109836000.0 1706.24 2383.3 2165.7 2244.0 2214.2 1707.73 1434.37 1267.08 2802.8999999999996 2868.5 2551.3 True False 1994.2115984370853 2504.5997901026403 2472.82882538684 2793.780100736989 1888.4941131330036 1888.4408551005706 1694.9764622139858 1446.6924702697563 2168.0476253115544 2220.503857740229 1917.7417977021173 1.0398749199848467 1.3060151231535495 1.2894482606312492 1.456807221954781 0.9847488934098642 0.9847211221882655 0.883839766252655 0.7543729150625057 1.130521130586693 1.15787425627417 1.0 10.905192775481884 -6.784090370559983 24.99862742566668 1.015295397792326 1.276564315290252 0.4926978568459447 0.1383708662841414 165.17098266519756 182289.58670942046 0.020602328048125992 0.03895408568568386 1.6440295882359322e-07 6.784090370559983 0.2612689174979259 IQDPTEDAEAEDT(ph)PRKR ddPTM_A549_PD325901_60min_R1 2 IQDPTEDAEAEDTPRKR 17 2 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 IQDPTEDAEAEDT(1)PRKR;IQDPTEDAEAEDT(1)PRKR 177.32 9.775e-31 155248000.0 4948.1 5344.3 5342.1 5454.6 5938.3 6444.0 6586.900000000001 6167.9 6389.799999999999 6325.5 7617.3 True False 5450.427469401302 5794.682916822481 5704.64703065694 5791.518253704596 5521.214294022857 6391.522200501389 6837.568083989981 6044.876395876051 6121.258927128058 5926.10685048342 6680.4203900431385 0.8158809103578145 0.8674129139326608 0.8539353360395486 0.8669391917814917 0.8264770735464455 0.9567544895868622 1.0235236234805019 0.9048646706254689 0.9162984617332638 0.8870859174245997 1.0 12.705723177113978 -7.270215611842345 23.244372347634858 0.9599414436153106 0.8489013173535765 0.6016191702953423 0.040665160219984946 118.40152681292776 313593.52872305294 0.00611000593675404 0.009868769214967264 5.367652452588038e-08 7.270215611842345 -0.1110401262617341 IQDSDEPDLSQNS(ph)ITGEHSQLLDDGHKK ddPTM_A549_PD325901_60min_R1 1 IQDSDEPDLSQNSITGEHSQLLDDGHKK 28 1 Q9UHW9-2 Q9UHW9-2 SLC12A6 Solute carrier family 12 member 6 1 IQDS(0.001)DEPDLS(0.141)QNS(0.586)IT(0.161)GEHS(0.111)QLLDDGHKK 53.091 0.0014913 11668000.0 1483.5 1044.4 778.79 1213.1 1650.6 1226.4 1076.9 1293.6 1963.7 1242.8 1578.0 True False 1634.1038279050201 1132.4152533221184 831.6433726447118 1288.0304318500064 1534.6675502608707 1216.4126050116245 1117.8820188022912 1267.7981331904325 1881.1725179506982 1164.3293959024254 1383.9160037661727 1.1807825210908676 0.818268775157146 0.6009348619291108 0.9307143123894626 1.1089311389451704 0.8789641869169036 0.8077672458155699 0.9160947122081554 1.3593111957888322 0.8413295263107249 1.0 10.434540666489733 -8.65334158160088 8.78405124146099 1.1694897425964692 0.8945069075732542 0.05816759166016805 0.19106339164278432 0.23893810203847082 17.994267264939943 0.032133096026403546 0.03642748642181769 2.221561898900897e-09 8.65334158160088 -0.27498283502321497 IQEQES(ph)S(ph)GEEDSDLSPEER ddPTM_A549_MK2206_60min_R1 1 IQEQESSGEEDSDLSPEER 19 0 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 2 IQEQES(0.896)S(0.896)GEEDS(0.203)DLS(0.006)PEER 69.602 0.0014081 1359900.0 177.92 504.05 441.74 319.04 547.94 512.67 281.07 456.45 636.77 637.87 614.64 True False 207.94854627363438 529.7039920283795 504.3853743945984 397.20481432224966 467.33875185172906 566.9203991171961 332.13678077099024 521.1531853194987 492.54261171273987 493.77472398004545 462.00792479897626 0.4500973578843147 1.1465257706539522 1.0917245080028897 0.8597359330904919 1.011538388773466 1.2270793825968855 0.7188984494486883 1.1280178484952548 1.0660912622376544 1.0687581261617778 1.0 8.851773788104644 -5.2541544925123995 24.86565868194972 1.0277687208368511 0.4500970631342071 0.6109751325984059 0.13341233825463478 373.36570758181875 1274383.1777581633 0.016286331212435723 0.2308576799709761 5.5698757529461036e-06 5.2541544925123995 -0.577671657702644 IQEQES(ph)S(ph)GEEDSDLSPEER ddPTM_A549_PD325901_60min_R1 3 IQEQESSGEEDSDLSPEER 19 0 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 2 IQEQES(0.891)S(0.891)GEEDS(0.211)DLS(0.007)PEER;IQEQES(0.998)S(0.978)GEEDS(0.023)DLS(0.002)PEER;IQEQES(0.999)S(0.987)GEEDS(0.013)DLSPEER 111.01 5.9217e-10 11989310.0 2468.63 2826.7 2728.47 2395.0 3056.5 3025.09 2768.3 2132.09 2287.5 2505.92 2774.3 True False 2719.2435002906445 3064.9159293045127 2913.6403818229796 2542.9337105603545 2841.8219843525694 3000.454670005393 2873.649171371886 2089.5637923577533 2191.364329995531 2347.695783537018 2433.0786877366895 1.1176142859646487 1.2596863162512735 1.1975117765440297 1.0451506247526483 1.1679942776516212 1.2331926152361685 1.1810753124655522 0.8588147201690043 0.9006549360859318 0.9649074628658654 1.0 11.248567263619801 -8.248950198794901 24.80021976932015 0.9447058257196014 1.173469674278465 0.7690748617078556 0.06327064067284398 275.50413707124625 547079.0412118136 0.011159848701295001 0.014355298069578557 5.637022927143691e-09 8.248950198794901 0.22876384855886356 IQEQES(ph)S(ph)GEEDSDLSPEEREK ddPTM_A549_MK2206_60min_R1 1 IQEQESSGEEDSDLSPEEREK 21 1 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 2 IQEQES(0.954)S(0.954)GEEDS(0.082)DLS(0.009)PEEREK 47.808 0.0043827 3624100.0 879.77 763.29 747.5 654.41 1073.4 925.68 684.11 560.78 915.54 1132.8 1353.6 True False 1028.2536676885977 802.1382007248119 853.5067400732609 814.740479377581 915.5042819243821 1023.6348431833459 808.4039317367277 640.2722823167235 708.1716518169543 876.8996932362317 1017.4637625405032 1.0106047070621496 0.7883702892002312 0.8388571382062213 0.8007562621623566 0.899790553364241 1.0060651601266213 0.7945284751156401 0.6292826397256929 0.6960165834788277 0.8618485743872613 1.0 9.990761697793333 IQEQES(ph)S(ph)GEEDSDLSPEEREK ddPTM_A549_PD325901_60min_R1 2 IQEQESSGEEDSDLSPEEREK 21 1 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 2 IQEQES(0.998)S(0.999)GEEDS(0.003)DLSPEEREK;IQEQES(0.999)S(0.99)GEEDS(0.009)DLS(0.002)PEEREK 143.9 3.9779000000000005e-22 48459000.0 5198.4 6263.299999999999 5364.1 6516.8 6539.9 7173.0 6954.6 7884.799999999999 7666.1 7073.2 7925.5 True False 5726.137741140183 6791.1302720532585 5728.140082953686 6919.327935273367 6080.559985430191 7114.58546620057 7219.26110870314 7727.531478494057 7343.920476580869 6626.5969448801325 6950.713743883906 0.8238201071334211 0.9770407072264962 0.8241081842845289 0.9954845200411028 0.8748108769089529 1.0235762438729201 1.0386359408133494 1.111760858414532 1.0565706986628467 0.9533692781854278 1.0 12.76294541528832 -7.310815659250266 6.55126253765069 1.0354731425568733 0.9046273441083207 0.5291087691399144 0.06163927739231109 0.12503487406469965 13.223348442136624 0.008137128725338519 0.013116410879877569 4.888598168771126e-08 7.310815659250266 -0.1308457984485526 IQEQES(ph)SGEEDSDLSPEEREK ddPTM_A549_MK2206_60min_R1 1 IQEQESSGEEDSDLSPEEREK 21 1 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 1 IQEQES(0.935)S(0.065)GEEDSDLSPEEREK 110.68 4.3696000000000006e-11 14001000.0 679.67 963.1 1160.3 1014.8 1263.3 1025.1 837.01 634.49 1406.5 1266.0 1068.3 True False 794.3816796639005 1012.1176762672993 1324.8479873003419 1263.4260455561032 1077.470243483391 1133.5754015936914 989.0838825670703 724.4309005441315 1087.9299957189703 980.0097207248143 803.0116264199312 0.9892530239014028 1.2604022693664176 1.6498490728047301 1.5733595927979758 1.3417866043697018 1.4116550300118487 1.231718010082501 0.9021424805190725 1.3548122591565597 1.2204178476144787 1.0 9.649277065757602 -7.899135550270447 4.775531540489196 1.1488318162535591 1.385669395311841 0.2639816424924387 0.19351473636531383 0.25957072188579605 10.061763760096232 0.033999011508971014 0.04738486359194851 1.2614337594423661e-08 7.899135550270447 0.23683757905828196 IQEQES(ph)SGEEDSDLSPEEREK ddPTM_A549_PD325901_60min_R1 2 IQEQESSGEEDSDLSPEEREK 21 1 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 1 IQEQES(0.836)S(0.164)GEEDSDLSPEEREK;IQEQES(0.536)S(0.456)GEEDS(0.008)DLSPEEREK 118.01 3.2204999999999998e-15 33815000.0 1604.9299999999998 1702.81 1786.51 1798.8899999999999 1830.71 1857.8 1952.6399999999999 1733.33 2028.73 1505.77 2120.11 True False 1767.8613121129792 1846.311774712215 1907.7533117573466 1910.0033497243892 1702.1272452066391 1842.6706927516266 2026.948783725606 1698.7573733789195 1943.4695331986152 1410.6954252236842 1859.3499104846012 0.950795383991076 0.9929877987468276 1.026032432625944 1.0272425534075973 0.9154421314721847 0.9910295433694739 1.0901384254227455 0.9136297389748299 1.0452414159592425 0.7587035755179699 1.0 10.860582580803023 -7.547451539189812 24.990281169798312 1.0178358157748626 0.9845117267747211 0.0 0.09236017053407226 419.8849288655084 427016.83912325354 0.007338319911754193 0.010884702739575432 2.834969956357895e-08 7.547451539189812 -0.0333240890001415 IQEQESS(ph)GEEDSDLSPEER ddPTM_A549_MK2206_60min_R1 2 IQEQESSGEEDSDLSPEER 19 0 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 1 IQEQES(0.049)S(0.951)GEEDSDLSPEER;IQEQES(0.138)S(0.862)GEEDSDLSPEER 174.78 2.651e-34 23639000.0 1105.33 1104.71 926.76 1024.04 1084.6799999999998 837.19 1318.84 1029.8400000000001 1746.67 1197.15 1359.51 True False 1291.8826812760587 1160.935020402085 1058.1885035856803 1274.929845970902 925.1250088669076 925.7808901182545 1558.4561566585285 1175.822973752728 1351.052033858837 926.7129835432154 1021.9061464328003 1.2641891682378799 1.136048573985583 1.0355045884394884 1.2475997433045487 0.9052935165291552 0.905935337946549 1.5250482268833396 1.1506173809182088 1.3220901337906583 0.9068474505003433 1.0 9.9970469874997 IQEQESS(ph)GEEDSDLSPEER ddPTM_A549_PD325901_60min_R1 2 IQEQESSGEEDSDLSPEER 19 0 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 1 IQEQES(0.019)S(0.981)GEEDSDLSPEER;IQEQES(0.217)S(0.783)GEEDSDLSPEER 223.11 1.1829e-74 29264000.0 900.21 984.1800000000001 951.81 1009.58 1285.82 1370.35 932.39 1150.91 922.3399999999999 1081.88 1212.02 True False 991.5986565004245 1067.1203025800105 1016.4055502984926 1071.9394636774614 1195.5084390381876 1359.1903239380947 967.8726116733853 1127.9541971785711 883.5772573237493 1013.5699121652043 1062.949223627805 0.9328749054598641 1.0039240622783183 0.9562127030203187 1.0084578264415802 1.1247088877472087 1.2786973203660945 0.910553947600689 1.0611552951973628 0.831250672829069 0.9535449950336565 1.0 10.05385696660166 -8.73960678357 24.976258023974268 0.9203128060623823 1.037077002714113 0.17223771796469944 0.10328661738987999 296.5851646946412 339290.1391393625 0.019197821942246302 0.021759114166008564 1.821349187868791e-09 8.73960678357 0.11676419665173066 IQEQESS(ph)GEEDSDLSPEEREK ddPTM_A549_MK2206_60min_R1 1 IQEQESSGEEDSDLSPEEREK 21 1 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 1 IQEQES(0.448)S(0.551)GEEDS(0.001)DLSPEEREK 68.23100000000001 0.00027818 13520000.0 585.01 846.72 579.0 817.88 644.15 650.01 494.52 539.83 999.54 1216.6 1170.9 True False 683.7453858787029 889.8144313664704 661.1109063577499 1018.2606367160282 549.3963883003455 718.7936267582827 584.3678828294377 616.3525556600397 773.1457859373907 941.7692150346044 880.133214803986 0.7768657907439381 1.0109997173151117 0.7511486843556807 1.1569392219140424 0.6242195829669959 0.8166873089982917 0.66395390265959 0.7002946205107227 0.8784417778274367 1.070030308132781 1.0 9.781578092833492 -9.706082992131225 1.2063030379513087 0.9756812393698957 0.8205064411126253 0.2176852664935408 0.1497190811326635 0.5238582080884885 1.5551384595447755 0.039731519292382736 0.02733657770481632 1.967510269563501e-10 9.706082992131225 -0.15517479825727043 IQES(ph)FTSEEER ddPTM_A549_MK2206_60min_R1 2 IQESFTSEEER 11 0 Q8TEW0-2;Q8TEW0;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 IQES(0.989)FT(0.009)S(0.002)EEER;IQES(0.591)FT(0.332)S(0.076)EEER 145.81 2.0709e-11 8668400.0 2621.8 2940.0 2610.21 2635.9 3176.2 2250.3 1974.2400000000002 2369.52 3150.1 2951.8999999999996 3233.6 True False 3064.295743144193 3089.6334422446894 2980.3770274336157 3281.6956183300485 2708.985187486699 2488.425252371754 2332.933853023515 2705.4067163506584 2436.607379676025 2285.0637398164117 2430.6078771800912 1.2607116811862245 1.2711361101277996 1.226185867089079 1.3501542758667269 1.1145299136566493 1.023787208020876 0.9598149808228654 1.1130576600818802 1.002468313606757 0.9401202724922726 1.0 11.247101451053119 -6.985301270287693 3.5176815643215784 1.0092693047157464 1.2725419638818463 0.8620136189821695 0.05035646510486031 0.054011342112873825 1.4290962745396787 0.0064463453494139 0.012316306468828168 1.034424337076431e-07 6.985301270287693 0.2632726591660999 IQES(ph)FTSEEER ddPTM_A549_PD325901_60min_R1 1 IQESFTSEEER 11 0 Q8TEW0-2;Q8TEW0;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 IQES(0.553)FT(0.446)S(0.001)EEER 164.64 9.1788e-14 5912000.0 1339.3 1408.9 1381.4 1517.8 2100.6 1396.6 1578.7 1818.4 1362.1 2074.1 1996.9 True False 1475.2647500594496 1527.6329475349803 1475.1501110330184 1611.5510588260975 1953.0611026765926 1385.2265526412536 1638.7782923977884 1782.1305854927957 1304.8556738303428 1943.1409720318795 1751.2939593920594 0.8423855641982401 0.872288138346163 0.8423201045843264 0.9202059141376403 1.1152103233169228 0.7909731802661607 0.9357528378426375 1.017607909817402 0.7450808968034742 1.1095458655646921 1.0 10.774205548994676 -5.757398872440475 0.005605160228086323 1.7566731694301188 3.73215550466627e-07 0.0 0.11762974136422852 76033.5772673348 72.93157665846672 11012.711492239956 11855.372665411103 1.7482403011909212e-06 5.757398872440475 -1.7566727962145683 IQES(ph)PGKVAAGR ddPTM_A549_MK2206_60min_R1 2 IQESPGKVAAGR 12 1 P49736;H0Y8E6 P49736 MCM2 DNA replication licensing factor MCM2 1 IQES(1)PGKVAAGR;IQES(1)PGKVAAGR 96.24700000000001 7.165e-05 23416000.0 4957.3 5062.8 5380.7 4654.6 6117.4 4246.8 4372.8 4450.1 6911.4 7499.0 7644.9 True False 5793.971045651346 5320.474895032795 6143.764168979526 5794.977208952938 5217.538563670776 4696.193557202309 5167.281157559984 5080.91530285968 5345.978935237891 5804.97069171831 5746.460341493714 1.008267820768651 0.9258699405989131 1.06913887921874 1.0084429134764745 0.9079569428150875 0.8172323966620464 0.899211140508249 0.8841817398741442 0.9303081579865697 1.0101819810365884 1.0 12.488457854592738 -5.243048044565129 22.307707783569825 0.951059575604057 1.0082680310434287 0.06016847275884629 0.06817076817992819 2335.6856119148824 2832857.6592128794 0.009843130333227732 0.3725427986690194 5.714154193733017e-06 5.243048044565129 0.0572084554393717 IQES(ph)PGKVAAGR ddPTM_A549_PD325901_60min_R1 2 IQESPGKVAAGR 12 1 P49736;H0Y8E6 P49736 MCM2 DNA replication licensing factor MCM2 1 IQES(1)PGKVAAGR;IQES(1)PGKVAAGR 81.44800000000001 0.00020449999999999998 45761000.0 5274.7 5667.7 5753.5 5845.3 6578.700000000001 7392.0 6381.1 6097.200000000001 6385.1 6450.7 7333.200000000001 True False 5810.183660971091 6145.3369697948765 6143.967108606108 6206.350905360512 6116.634807282921 7331.802002809792 6623.936252371903 5975.586562839136 6116.756451783367 6043.401701116649 6431.262888984858 0.9034281075529472 0.9555412484102148 0.9553282480691598 0.9650283330806514 0.9510783360697608 1.1400252375575148 1.029958869154151 0.9291466802070583 0.9510972506286188 0.9396912869892913 1.0 12.650886347997114 -5.34120047987093 0.9898631490361659 0.9861730499960938 0.874380309810571 0.1713422682569793 0.055817060959973935 2.584508383099391 2.1024099008238664 0.008643686340790366 0.2967986177381208 4.5582644787737664e-06 5.34120047987093 -0.11179274018552277 IQESFT(ph)SEEER ddPTM_A549_PD325901_60min_R1 1 IQESFTSEEER 11 0 Q8TEW0-2;Q8TEW0;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 IQES(0.126)FT(0.71)S(0.164)EEER 143.31 2.8529e-11 5059900.0 1533.0 1337.8 1426.8 1246.3 1958.4 1716.8 1409.2 1605.7 1724.6 1768.5 1973.2 True False 1688.6290314650469 1450.5411010095083 1523.6312280453967 1323.281120447336 1820.8487401132252 1702.8189500032267 1462.827877143829 1573.6730538527192 1652.1210594580496 1656.8366081859012 1730.5089091453817 0.9757990973296882 0.838216488423549 0.8804526922648712 0.7646774387892885 1.052204198713116 0.9839989502534086 0.8453165825457969 0.9093700965861444 0.9547024292836237 0.9574273784028863 1.0 10.756980653583405 -9.132374441768842 0.2856081793876629 1.0176133535758105 0.8783784128562255 0.10904719324103962 0.07615257297636208 1.963233916533473 0.4810991546891158 0.10109447976498469 0.06644646693897527 7.372682950683507e-10 9.132374441768842 -0.13923494071958498 IQETQAELPRGS(ph)IPR ddPTM_A549_PD325901_60min_R1 2 IQETQAELPRGSIPR 15 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 IQETQAELPRGS(1)IPR;IQETQAELPRGS(1)IPR 132.13 6.226100000000001e-10 12589600.0 2455.51 2345.9 2314.79 2545.6000000000004 3051.5 2902.7 2872.5 3053.3 3505.7 3271.6 3130.5 True False 2704.79156754908 2543.597225936766 2471.8855693630535 2702.835930522937 2837.1731671035054 2879.0613735871184 2981.814559392312 2992.3995362324886 3358.367620400142 3065.0306176652507 2745.468345874529 0.985184029389167 0.9264711537318927 0.9003511452162346 0.984471714847613 1.0334022504272455 1.048659467486971 1.086085936438833 1.0899413721993956 1.2232403354591885 1.116396268881013 1.0 11.422836562357267 -7.029441156875213 1.1939849424735345 1.10525508906229 0.9358861758451763 0.6307982576220845 0.05310967459445569 0.3305251285997608 0.9280005244892224 0.01313265432525717 0.03177743180270829 9.344559703364258e-08 7.029441156875213 -0.16936891321711378 IQFTSLYHKEEAPAS(ph)PLRPLYPQIS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 IQFTSLYHKEEAPASPLRPLYPQISPLK 28 2 P85037;P85037-2;U3KQ26 P85037;U3KQ26 FOXK1 Forkhead box protein K1 2 IQFTSLYHKEEAPAS(0.999)PLRPLYPQIS(1)PLK;IQFTSLYHKEEAPAS(1)PLRPLYPQIS(1)PLK 115.2 1.1458e-20 12831600.0 3700.5 3642.8999999999996 3460.1000000000004 4422.8 4501.4 3850.0 4413.799999999999 4460.4 4494.799999999999 4246.3 4094.3 True False 4076.1720358358803 3949.899967758661 3694.9231932715734 4695.986311092412 4185.237192986965 3818.64687646343 4581.769574324035 4371.43382288389 4305.8991870880445 3978.18789332191 3590.7270559061126 1.1351940630328046 1.1000279069559944 1.0290181168724803 1.3078093205019141 1.1655681782058562 1.0634745601680946 1.2760005154910987 1.2174230329463924 1.1991719559986047 1.107905956477113 1.0 11.810060277387175 -10.755043678410708 1.015141248110964 1.0003879213528821 1.16693420200244 0.16684444843998558 0.08566316303322917 0.46387213431113766 0.85210865634341 0.054856416294246264 0.014132675019983573 1.7577468227449925e-11 10.755043678410708 0.1665462806495579 IQIISTDSAVAS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 IQIISTDSAVASPQR 15 0 P49116;P49116-2;C9JKS0;C9JMI6;C9J2Y1 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIIS(0.001)T(0.004)DS(0.006)AVAS(0.989)PQR;IQIIS(0.001)T(0.001)DS(0.015)AVAS(0.983)PQR 98.281 2.6340000000000002e-09 5632400.0 1185.3 1127.8 1118.4 1089.2 1654.8 1055.9 1128.1 1006.5 1701.1 1251.4 2150.3 True False 1385.3496621972736 1185.2002027767217 1277.0059372547632 1356.0540488960453 1411.381112100304 1167.6346371503057 1333.06116763708 1149.1744572769749 1315.8035660985006 968.7078708649543 1616.321164739098 0.857100489939382 0.7332702365300235 0.7900694274834258 0.8389756185089216 0.8732058596337969 0.7224026156576264 0.824750177575172 0.7109815068606562 0.8140730906724802 0.5993288289467646 1.0 10.658498176279025 -10.365660316444137 0.7587494168767297 0.9997881255380526 0.7938108587198789 0.0 0.12858729072457653 0.2901349668660287 0.3065284615437924 0.03329141561566953 0.010280476356253449 4.308634787294706e-11 10.365660316444137 -0.20597726681817374 IQIISTDSAVAS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 IQIISTDSAVASPQR 15 0 P49116;P49116-2;C9JKS0;C9JMI6;C9J2Y1 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIISTDSAVAS(1)PQR;IQIISTDSAVAS(1)PQR 272.95 3.3937999999999996e-91 30463000.0 7089.799999999999 8066.400000000001 8728.8 7671.200000000001 8237.4 7931.5 8787.8 8698.0 8163.1 8279.2 9294.2 True False 7809.551276765099 8746.183837033268 9321.18885853845 8145.0326014407465 7658.833441487279 7866.908493680442 9122.224537868677 8524.511566551007 7820.033294944922 7756.449899062887 8151.072320788067 0.9581010901900636 1.0730102117640963 1.1435536935141868 0.9992590276334664 0.9396105371258444 0.9651378596675055 1.1191441050772957 1.045814738363999 0.9593870581912418 0.9515864408761586 1.0 12.992774151382271 -7.763140445261299 0.46893136389566414 0.9830011669660691 1.043407942803867 0.06745173976634533 0.06554197046041588 2.0184792074479097 0.9294765128092232 0.021445119558927847 0.04618620619131227 1.7252798684006763e-08 7.763140445261299 0.060406775837797855 IQILEGWKK ddPTM_A549_PD325901_60min_R1 1 IQILEGWKK 9 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 58.978 0.019658000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IQIVTAVDASGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 IQIVTAVDASGSPK 14 0 P49116;P49116-2;C9JKS0;C9JMI6 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIVTAVDAS(0.11)GS(0.89)PK;IQIVTAVDAS(0.015)GS(0.985)PK 171.46 1.3751e-22 6674800.0 3986.2999999999997 4487.2 4558.700000000001 4739.6 6345.5 4621.2 4826.1 5090.200000000001 6948.299999999999 6311.8 6966.299999999999 True False 4659.089984322107 4715.57931361917 5205.1922086581635 5900.802212768729 5412.085355833022 5110.212316695704 5702.939899949748 5811.751438083718 5374.521144155077 4885.959996264516 5236.375449900935 0.8897547605014172 0.9005426289110691 0.9940448805588681 1.1268867691449367 1.0335556354988662 0.9759064004458242 1.0891006488195265 1.1098805831796628 1.0263819307029936 0.9330805330922083 1.0 12.354352827378992 -5.824897789715883 3.9194488506291054 1.0309638569281572 0.8925493453343074 0.49397134876873083 0.05447406839064383 0.12046972284560462 3.643861348177057 0.006816363034575982 0.024773838285464256 1.496587833419394e-06 5.824897789715883 -0.13841451159384976 IQIVTAVDASGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 IQIVTAVDASGSPK 14 0 P49116;P49116-2;C9JKS0;C9JMI6 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIVTAVDAS(0.01)GS(0.99)PK;IQIVTAVDAS(0.01)GS(0.99)PK 195.92 3.3093e-31 11411500.0 7863.9 7920.0 8140.7 7992.4 9548.099999999999 7544.400000000001 8037.8 8561.599999999999 9734.5 8606.8 9773.2 True False 8662.237338902789 8587.446195242417 8693.176856005868 8486.072395942612 8877.474395156809 7482.960907737845 8343.682877452931 8390.832171554728 9325.392817635618 8063.365179154326 8571.158357419246 1.010626216164202 1.001900307653174 1.014235940289331 0.9900729915457712 1.0357379977086076 0.8730396284488839 0.9734603573425509 0.978961281737558 1.0879967944546844 0.9407555948577976 1.0 13.06527447658145 -8.729957132044305 24.982407464496852 1.0415540508462182 0.9840850257012942 0.0 0.05321397608600284 219.66136722674418 174310.07576438837 0.008404704954192457 0.00952958197731972 1.8622709469849475e-09 8.729957132044305 -0.057469025144924024 IQMT(ph)WTR ddPTM_A549_MK2206_60min_R1 2 IQMTWTR 7 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;I3L4N6;Q9UP95-7 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 IQMT(0.966)WT(0.034)R;IQMT(0.998)WT(0.002)R 70.1 0.022805000000000002 7473600.0 2424.16 1998.1799999999998 1750.16 1616.17 3317.7 2585.0 2312.3 2373.5 3348.4 3120.7 3642.3 True False 2833.2989429782674 2099.87882708316 1998.3590049586887 2012.1317225526286 2829.670724930613 2858.542984215875 2732.414979103996 2709.9508935388967 2589.992746296054 2415.731702579721 2737.816387633918 1.034875441529104 0.7669903783788519 0.729909797452018 0.7349403457591097 1.0335502182365404 1.0440959434413684 0.9980271107462432 0.9898220004011652 0.9460067366074842 0.8823570906694186 1.0 11.418809979785118 -6.766160607440374 24.99987575686091 0.9857029298730768 0.8069319990571576 0.4631137245025012 0.08686317615167191 69.84236071701653 369832.2831322175 0.011518095923116287 0.022281934427166018 1.7133235822047406e-07 6.766160607440374 -0.17877093081591922 IQMT(ph)WTR ddPTM_A549_PD325901_60min_R1 2 IQMTWTR 7 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;I3L4N6;Q9UP95-7 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 IQMT(1)WTR;IQMT(0.997)WT(0.003)R 71.45100000000001 0.021729 4149400.0 2361.6 2731.2 2158.2 2531.5 2451.3 2032.1799999999998 1820.52 2052.6 2572.7 2640.9 2870.8 True False 2601.3478934819677 2961.3678091472343 2304.668430310889 2687.865005546359 2279.129144525914 2015.6305998471319 1889.8008848267696 2011.659282766451 2464.5783658052464 2474.153123301187 2517.7097995005884 1.0332199104114261 1.1762149115575788 0.915382873263647 1.0675833275461384 0.9052390172123892 0.8005809884232692 0.7506031414746964 0.7990036354330761 0.9788969190548168 0.9826998821674995 1.0 11.297896286960793 -5.770887790115702 24.99727207351428 0.9443055538933945 1.1047174193091216 0.31302637092075336 0.10128561030095011 191.20717273823007 505874.3101817534 0.015815495544255025 0.050117387709210065 1.6947756278195262e-06 5.770887790115702 0.16041186541572705 IQNNDNVGKPKS(ph)R ddPTM_A549_MK2206_60min_R1 1 IQNNDNVGKPKSR 13 2 Q08170;A0A0D9SEM4 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 IQNNDNVGKPKS(1)R 65.225 0.0011415999999999998 8595100.0 1921.4 2436.4 1839.9 1845.5 2341.9 1784.8 1613.3 1065.0 2397.4 2918.4 3053.7 True False 2245.685346280134 2560.402353294203 2100.825486368954 2297.6475828476446 1997.4096122961716 1973.6663513456438 1906.4157271065505 1215.967011425712 1854.3927278611152 2259.131413083174 2295.382012167503 0.9783492832025633 1.1154580543551633 0.9152400233306561 1.0009870124746696 0.8701861396962157 0.8598422140120952 0.8305439865786628 0.5297449422274979 0.807879785600495 0.9842071607722942 1.0 11.164518560826671 -6.511397025688396 1.45894561967532 0.8654433241449656 1.0280317778816468 0.26115120744562714 0.1250946052384339 0.566301014851639 2.335921540758242 0.021366725703648653 0.06777076109614574 3.0803706327137743e-07 6.511397025688396 0.16258845373668118 IQNNDNVGKPKS(ph)R ddPTM_A549_PD325901_60min_R1 1 IQNNDNVGKPKSR 13 2 Q08170;A0A0D9SEM4 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 IQNNDNVGKPKS(1)R 72.446 0.00035113 12042000.0 2732.0 2722.7 2422.4 2746.8 3368.7 3025.4 3277.2 3249.3 3490.5 3361.2 3359.1 True False 3009.3506288078975 2952.1514843164796 2586.798631074551 2916.4635975645847 3132.0941333840988 3000.7621454681716 3401.9156393526505 3184.4901624734625 3343.8064235407205 3148.9732583740188 2945.9519950893214 1.0215205929438962 1.0021044094532063 0.8780858056704753 0.9899901975409335 1.063185733713605 1.0186052422002174 1.1547763320730908 1.080971505232185 1.1350512259244523 1.0689153331836767 1.0 11.524518206206642 -6.719972299891616 3.8434713064593886 1.07031932476407 0.9655617668866467 0.45836645829050926 0.053324224204572945 0.19105882027454152 5.905658813739423 0.00930442576427694 0.019635309516883317 1.9055822556615018e-07 6.719972299891616 -0.10475755787742336 IQNS(ph)DDEER ddPTM_A549_MK2206_60min_R1 2 IQNSDDEER 9 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 IQNS(1)DDEER;IQNS(1)DDEER 169.65 1.9492999999999999e-07 39125000.0 3237.6 3162.0 2424.7 2280.4 1949.14 2664.6000000000004 2002.95 2719.7 2117.3 3119.3 3286.4 True False 3784.0277282796683 3322.9322940060206 2768.5589199406504 2839.0981023710474 1662.424088010145 2946.566203381672 2366.8600883952563 3105.225803731934 1637.7349306333278 2414.6479635520623 2470.296179974224 1.5318113507827036 1.345155419396185 1.1207396677306682 1.1492946171339955 0.6729654935658328 1.1927987531488706 0.9581280607493605 1.2570257076478721 0.6629710817309432 0.977473058950064 1.0 11.270468310991578 -2.977372768848616 0.4020666083648189 0.8727994136881665 5.952785727464201 0.45374743330123324 0.1859518975074456 16.53274486254641 0.41031681604022874 0.044736846096771574 60.04376352136816 0.0010534822706742158 2.977372768848616 5.079986313776034 IQNS(ph)DDEER ddPTM_A549_PD325901_60min_R1 2 IQNSDDEER 9 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 IQNS(1)DDEER;IQNS(1)DDEER 169.65 1.9492999999999999e-07 53776000.0 3037.2 3229.7 3870.1 3706.8 3443.4 2779.2 2617.0 2709.3 3100.3 2644.4 2857.5 True False 3345.534308131532 3501.8781536331344 4132.748258801857 3935.7606172463943 3201.5474630851095 2756.567116640823 2716.59136707735 2655.260886095267 2970.005172583669 2477.4321327038733 2506.0456151849435 1.3349854000501244 1.397372071926432 1.6491113464815623 1.5705063760205895 1.2775296042840938 1.0999668561249996 1.08401513149507 1.0595421208641134 1.1851361182683364 0.988582218014033 1.0 11.291196959578116 -7.020535848920409 3.0889687248968745 1.087990989649778 1.491747227860162 0.8143385842952315 0.09297212249497859 0.09072036196492657 1.765293088708161 0.015338611917475773 0.029203651553508233 9.538150067512433e-08 7.020535848920409 0.4037562382103841 IQNTGDY(ph)YDLYGGEK ddPTM_A549_PD325901_60min_R1 2 IQNTGDYYDLYGGEK 15 0 Q06124;Q06124-1;A0A1W2PPU4;Q06124-3 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 IQNT(0.112)GDY(0.795)Y(0.092)DLYGGEK;IQNT(0.007)GDY(0.496)Y(0.496)DLYGGEK 93.959 2.4609e-05 5394000.0 3900.1 3563.7 3447.0 3701.5 4667.7 4447.3 3698.3 4559.0 4441.6 4173.5 4621.4 True False 4296.03528089813 3864.0255058062367 3680.9341484948723 3930.1332482835696 4339.856854690821 4411.082663297619 3839.040830287412 4468.0671685336865 4254.934998080064 3909.984497746036 4052.9970974683097 1.0599650524254343 0.9533748514697645 0.9082005390021509 0.9696856804409048 1.070777192858514 1.0883508073699302 0.9472103576598797 1.102410650953747 1.0498243388177837 0.9647143592055356 1.0 11.984773426869053 -6.694268239028411 10.1465793906739 1.0319312355045809 0.9666250901832498 0.1997483189795688 0.05641079735703465 0.44973233990093203 64.92635481674442 0.0074352575281397435 0.015481518663036247 2.0217700604573948e-07 6.694268239028411 -0.06530614532133105 IQNTGDYY(ph)DLYGGEK ddPTM_A549_MK2206_60min_R1 1 IQNTGDYYDLYGGEK 15 0 Q06124;Q06124-1;A0A1W2PPU4;Q06124-3 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 IQNT(0.001)GDY(0.372)Y(0.613)DLY(0.014)GGEK 84.71799999999999 0.00016514 2581900.0 1433.9 1542.2 1913.3 1329.2 1595.4 1400.8 1535.8 1291.6 2173.9 1777.7 2033.6 True False 1675.907264510817 1620.6913927312105 2184.6347100764824 1654.8540596700545 1360.7187734136012 1549.0317262242158 1814.834980282801 1474.6882553591072 1681.5151210049555 1376.1163353337292 1528.6009954952476 1.09636672319963 1.0602448889588265 1.4291726333520332 1.0825938649437439 0.890172633292539 1.0133656400782003 1.1872522559065959 0.9647306652978639 1.100035343402459 0.9002456098021084 1.0 10.577996159678342 -6.506560149208939 24.989696410404584 1.0389873085044945 1.19411367883596 0.2991403698582623 0.11966733632929387 704.1070513756084 1078242.4097105132 0.015301654984466806 0.034668980618877666 3.114869460814515e-07 6.506560149208939 0.1551263703314656 IQPAGNTS(ph)PR ddPTM_A549_MK2206_60min_R1 3 IQPAGNTSPR 10 0 H0Y5S9;H0Y682;P49674 H0Y5S9 CSNK1E Casein kinase I isoform epsilon 1 IQPAGNT(0.149)S(0.851)PR;IQPAGNT(0.024)S(0.976)PR;IQPAGNT(0.235)S(0.765)PR 94.76700000000001 0.00057131 200329000.0 19364.399999999998 24991.3 25988.4 23836.1 34802.9 25570.7 26872.9 26238.2 38912.9 38275.8 38639.5 True False 22632.63730587435 26263.250423527115 29673.945904642078 29675.945570043175 29683.43951312285 28276.574501543084 31755.358081548173 29957.545201117482 30099.190281132407 29629.2701963024 29044.245754051226 0.7792468600331081 0.9042496970286721 1.0216807196827626 1.021749568618212 1.0220075867861869 0.9735689038369653 1.0933442152519588 1.0314451080878513 1.036321980471262 1.0201425248637959 1.0 14.825964744749005 -5.457224885909994 2.079108956171589 1.0220003808145912 0.757309230644891 0.8781898821338797 0.02796285273094101 0.11358802051797681 0.7149492923613388 0.0039860073660211975 0.04811035683442024 3.489595708096706e-06 5.457224885909994 -0.26469115016970024 IQPEDMFVCDINEKDIS(ph)GPSPSKK ddPTM_A549_PD325901_60min_R1 1 IQPEDMFVCDINEKDISGPSPSKK 24 2 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 IQPEDMFVCDINEKDIS(0.485)GPS(0.485)PS(0.029)KK 43.291000000000004 0.021005000000000003 9722000.0 2050.8 1619.9 2032.3 2152.9 2001.8 2192.1 1874.2 2672.7 1860.9 2110.9 1905.1 True False 2258.9957062808335 1756.4146580395438 2170.2240992126867 2285.879743409347 1861.2004738350977 2174.248264388438 1945.523706601593 2619.3909018074105 1782.6928444540679 1977.6174137515527 1670.7847774239144 1.3520566722925542 1.0512512932680995 1.298924989344725 1.3681473366867825 1.1139678185868884 1.301333537249953 1.1644370555023147 1.5677608134819714 1.0669793432058305 1.1836458175066245 1.0 10.706310188892456 -8.970767584937137 24.995608103448177 1.0295495079548185 1.2683263189206744 0.2557168467159797 0.1398121199652369 123.04309621343711 105210.68478862497 0.02148227078094988 0.022573031872355483 1.0696271428887435e-09 8.970767584937137 0.2387768109658559 IQPEDMFVCDINEKDISGPS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 IQPEDMFVCDINEKDISGPSPSK 23 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 IQPEDMFVCDINEKDIS(0.125)GPS(0.703)PS(0.172)K;IQPEDMFVCDINEKDIS(0.098)GPS(0.789)PS(0.113)K 70.79899999999999 8.1765e-05 12286300.0 1365.73 1314.05 1674.12 1306.79 2400.28 1374.76 1485.42 1531.83 2556.3 2173.3999999999996 2084.3 True False 1596.231835107299 1380.9295322386502 1911.5353895537771 1626.9536086640314 2047.2019916316892 1520.2361907081688 1755.301586412084 1748.971593532626 1977.302131572275 1682.4274305081447 1566.7107862464325 1.0188426920399227 0.8814195602413116 1.2200946124418308 1.038451782515604 1.3066878773053132 0.9703361999251893 1.1203737165922514 1.1163334093862076 1.2620722017938921 1.0738596078341613 1.0 10.613523168520162 -5.7564904411276565 24.99917465157475 1.126438590842754 0.9501311141061096 0.2892573663465621 0.10449016989331185 122.91437914816923 620870.3868414473 0.01577807644958958 0.0574624679385997 1.75190099332999e-06 5.7564904411276565 -0.1763074767366445 IQPEDMFVCDINEKDISGPS(ph)PSK ddPTM_A549_PD325901_60min_R1 3 IQPEDMFVCDINEKDISGPSPSK 23 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 IQPEDMFVCDINEKDIS(0.164)GPS(0.816)PS(0.02)K;IQPEDMFVCDINEKDIS(0.211)GPS(0.782)PS(0.007)K;IQPEDMFVCDINEKDIS(0.003)GPS(0.788)PS(0.208)K 124.5 2.3238e-16 26776300.0 5613.1 6164.6 7203.1 5914.4 6268.6 8424.2 7757.4 7661.7 5935.7 6151.1 7755.5 True False 6182.937779854178 6684.112476665582 7691.945681759045 6279.719055423024 5828.315161495998 8355.596108234611 8052.612102012155 7508.881383012623 5686.243170952769 5762.718496246705 6801.622666165114 0.9090386343557981 0.98272321249397 1.1308986192402102 0.9232677794170623 0.8569006908438386 1.22847098675435 1.1839251451084059 1.1039838214439313 0.8360127354960698 0.8472564238109723 1.0 12.731663256489627 -8.754157501709749 24.991926458946455 0.9225615684972001 1.0421271001981154 0.21975491874305253 0.11884803283893432 234.40624449693425 804498.299322758 0.02185528025569698 0.024534514191144004 1.7613371621161059e-09 8.754157501709749 0.11956553170091533 IQPEDMFVCDINEKDISGPS(ph)PSKK ddPTM_A549_PD325901_60min_R1 1 IQPEDMFVCDINEKDISGPSPSKK 24 2 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 IQPEDMFVCDINEKDIS(0.187)GPS(0.764)PS(0.048)KK 61.89 0.00015665 9551500.0 1958.8 2239.2 2301.1 2104.1 2320.4 2683.7 2125.8 3015.6 2003.0 2106.6 2123.6 True False 2157.6559340076556 2427.905242473082 2457.266483638396 2234.0654782421866 2157.42310894543 2661.844836977899 2206.698482282395 2955.4514923075653 1918.8208756201288 1973.5889164853957 1862.4106626095336 1.1585285551278128 1.3036358152456025 1.3194009962310755 1.1995557817049358 1.1584035423865848 1.4292469917715307 1.1848613877620628 1.5868957108345307 1.0302888155352137 1.059695885611009 1.0 10.862955507712643 -8.952662637398078 24.997989339791538 1.0133623688492897 1.2885588476193615 0.47604019215324966 0.12240949459188494 62.07707839021547 32781.83497443331 0.019346372212407207 0.020590469131982318 1.1151604606656983e-09 8.952662637398078 0.2751964787700718 IQPEEKPVEVS(ph)PAVTK ddPTM_A549_PD325901_60min_R1 2 IQPEEKPVEVSPAVTK 16 1 Q8N0X7 Q8N0X7 SPG20 Spartin 1 IQPEEKPVEVS(1)PAVTK;IQPEEKPVEVS(1)PAVTK 131.59 1.1370999999999999e-10 28579000.0 10650.9 10744.8 10699.0 11136.0 11894.0 11790.3 11810.8 11008.5 11744.3 11952.9 13190.9 True False 11732.171527221837 11650.30200487888 11425.098478313508 11823.84542830902 11058.606472072453 11694.283705861506 12260.266457117745 10788.926831498817 11250.727912903389 11198.19185410532 11568.502924004564 1.014147777313317 1.0070708441197334 0.9876038890569416 1.0220722167753116 0.9559237305568659 1.0108726930946224 1.0597971524628114 0.932612188662015 0.9725310169182052 0.9679897154945736 1.0 13.497914557403714 -8.267164846367502 24.99961223634462 0.9825848736493517 1.0060003182172135 0.2583283275768413 0.0289269011480965 756.4360535262913 3302882.080381866 0.004748710501557426 0.005816888758696557 5.405491062691545e-09 8.267164846367502 0.02341544456786182 IQPQPPDEDGDHS(ph)DKEDEQPQVVVLK ddPTM_A549_MK2206_60min_R1 6 IQPQPPDEDGDHSDKEDEQPQVVVLK 26 1 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK 184.44 1.5667e-57 434810300.0 28105.7 30468.3 28106.499999999996 25144.8 39148.4 33230.0 26978.6 30245.999999999996 40917.4 42089.7 42525.7 True False 32849.25504160794 32019.006329368676 32092.424334273077 31305.27712879297 33389.72221957188 36746.376543711216 31880.262403345198 34533.46312449021 31649.674231661138 32581.607537433818 31965.395040387597 1.0276505264553621 1.0016771664768522 1.00397396289722 0.9793489831500415 1.0445584100363745 1.1495674149273911 0.9973367250135706 1.080339006630699 0.9901230437375308 1.0192774873036186 1.0 14.964223302869916 -4.34847184184231 16.209265693265372 1.0137113682798489 1.0260645958162449 0.0 0.04908793742310956 0.0 0.0 0.006583283657196524 0.0 4.4825811256583766e-05 4.34847184184231 0.012353227536396005 IQPQPPDEDGDHS(ph)DKEDEQPQVVVLK ddPTM_A549_PD325901_60min_R1 5 IQPQPPDEDGDHSDKEDEQPQVVVLK 26 1 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK 257.08 1.0100999999999997e-124 1251367500.0 37508.899999999994 35615.9 36803.6 36270.5 43006.8 38554.200000000004 41147.5 42885.799999999996 40683.2 40945.5 43887.200000000004 True False 41316.77591540726 38617.37688701194 39301.3136140255 38510.84640871788 39986.15073340556 38240.227377804295 42713.39062927595 42030.40907574076 38973.42658363895 38360.194142197244 38489.352623882645 1.07345988172766 1.0033262254208415 1.0210957299821934 1.0005584345635863 1.0388886278277942 0.9935274243629713 1.1097456235928553 1.0920009355953908 1.0125768277914848 0.9966443062072897 1.0 15.232171785326194 -8.976317582539483 24.74419761674775 1.0055485609161194 1.039672765624169 0.18533042844340142 0.03596235382147442 207.32892725973608 216626.90052862588 0.006504900543416513 0.00671753046113579 1.0560449824676992e-09 8.976317582539483 0.034124204708049666 IQPQPPDEDGDHS(ph)DKEDEQPQVVVLKK ddPTM_A549_PD325901_60min_R1 3 IQPQPPDEDGDHSDKEDEQPQVVVLKK 27 2 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 IQPQPPDEDGDHS(1)DKEDEQPQVVVLKK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLKK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLKK 129.03 9.7001e-25 47612800.0 4936.5 4636.8 4843.1 5249.0 6845.1 5686.2 5922.299999999999 5989.6 5320.3 5908.9 5748.7 True False 5437.649845940774 5027.559408851012 5171.781889926172 5573.218808656069 6364.323790313033 5639.893472453603 6147.67636730691 5870.132729249697 5096.706292841624 5535.811045580818 5041.64634401179 1.078546465759015 0.9972058858952872 1.0258121131540594 1.1054362857632118 1.262350303065635 1.1186610657751472 1.2193787401626863 1.1643285404621728 1.0109210256080798 1.0980165342529375 1.0 12.29967920578693 -8.778565828232193 22.586590259383264 1.0051570767005638 1.121466733101132 0.16224403591683811 0.07784152756189151 68.50982101430125 90350.95434055327 0.013728176202634008 0.014640366392451209 1.6650764245206953e-09 8.778565828232193 0.11630965640056834 IQPS(ph)SPPPNHPNNHLFR ddPTM_A549_MK2206_60min_R1 1 IQPSSPPPNHPNNHLFR 17 0 H0Y4E8;Q9Y2K2-7;Q9Y2K2-8;Q9Y2K2 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 IQPS(0.539)S(0.461)PPPNHPNNHLFR 47.047 0.007608 4236200.0 1203.4 1481.7 961.9 1106.9 1693.9 1158.6 1013.8 864.71 1987.0 1575.0 1924.5 True False 1406.5044996947604 1557.1122011476048 1098.3118839818999 1378.0905496906291 1444.7295538957608 1281.2022829835628 1197.9943371602446 987.2852905633121 1536.9476725869845 1219.2064061149938 1446.5935365020678 0.9722872833344434 1.0763992523516843 0.7592401433215791 0.9526453111514087 0.9987114676242684 0.8856684691690045 0.8281485482487722 0.6824897703819519 1.0624599334954843 0.8428120099741999 1.0 10.498443895371585 IQPSFQS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 IQPSFQSPVK 10 0 H0Y3G1;Q5TGL8 H0Y3G1 PXDC1 PX domain-containing protein 1 1 IQPSFQS(1)PVK 125.82 1.124e-05 3734800.0 3717.1 3359.6 3273.0 4317.1 4944.0 4658.5 3559.1 4084.3 4669.4 4595.6 5062.7 True False 4094.4572556156063 3642.7252825172236 3495.1254621478715 4583.757462154529 4596.750495874074 4620.562720520755 3694.5434981142516 4002.835432428632 4473.161356275904 4305.43303171 4440.019995099495 0.9221709046659046 0.8204299274637827 0.787186874384684 1.03237315760147 1.0352995033688057 1.0406625928758264 0.8321006441844778 0.901535451832787 1.007464236920777 0.9696877573663993 1.0 12.116350458256822 -6.264223740928814 24.98419471723617 0.9905333668795073 0.8409793029342408 0.430835198598996 0.06742529100833061 155.39022184452358 1394329.8648092968 0.00977780366114451 0.02370982109347041 5.442222068362091e-07 6.264223740928814 -0.1495540639452665 IQQALTS(ph)PLPMTPILEGSHR ddPTM_A549_MK2206_60min_R1 1 IQQALTSPLPMTPILEGSHR 20 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 IQQALT(0.155)S(0.724)PLPMT(0.12)PILEGSHR 63.376000000000005 0.00048646 3487300.0 654.89 812.27 588.66 700.55 809.83 802.32 782.91 543.11 1218.7 1004.1 952.82 True False 765.4194214767333 853.6110735143178 672.1408396140812 872.1847814488847 690.7050797753138 887.2209698630876 925.1546128488133 620.0975057046179 942.666395863995 777.2731126222634 716.2084975057934 1.0687103324553082 1.1918471736750276 0.9384709088970901 1.2177805548053129 0.9643910707296889 1.2387747045069246 1.2917392296666093 0.8658058482468675 1.3161899071944059 1.085260947516161 1.0 9.484235825490886 IQQALTSPLPMT(ph)PILEGSHR ddPTM_A549_MK2206_60min_R1 1 IQQALTSPLPMTPILEGSHR 20 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 IQQALT(0.052)S(0.209)PLPMT(0.739)PILEGSHR 80.061 5.6807e-05 2815300.0 611.18 778.68 623.31 715.55 920.75 745.89 511.21 603.89 1080.4 1114.0 1175.9 True False 714.3322420836327 818.3114859888079 711.7047306422269 890.8597821222603 785.3088947101497 824.8195847182894 604.090239790578 689.4932568355614 835.6911250442772 862.3466262933987 883.8915768110061 0.8081672694074913 0.9258052768657388 0.8051946067978016 1.0078835521166463 0.8884674493035299 0.9331682825784554 0.6834438246035518 0.7800654230954268 0.9454679136771148 0.9756248944069142 1.0 9.787725601031172 -8.94296627773455 6.203396988275678 0.9764043866065096 0.8578646022105063 0.29600325836380526 0.08316510990363733 0.19064831412557628 14.428107056905953 0.015022872361110854 0.015793779915875782 1.140338329554025e-09 8.94296627773455 -0.11853978439600332 IQQALTSPLPMT(ph)PILEGSHR ddPTM_A549_PD325901_60min_R1 2 IQQALTSPLPMTPILEGSHR 20 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 IQQALTS(0.002)PLPMT(0.996)PILEGS(0.001)HR;IQQALTS(0.001)PLPMT(0.998)PILEGS(0.001)HR 81.016 4.8938000000000005e-05 17662900.0 2202.8 2177.7 2558.8999999999996 2444.91 2474.4 2884.3999999999996 2757.6000000000004 2579.26 2993.6 2529.2 2563.0 True False 2426.4266343843474 2361.222421638815 2732.562341915733 2595.9265379065178 2300.6066802165865 2860.9104027197727 2862.5419770166213 2527.814635909674 2867.789402524424 2369.5058803640277 2247.7672481956292 1.0794830453785351 1.0504746092079866 1.2156785112467796 1.1548911658848884 1.0235075193231744 1.2727787563487 1.2735046207806862 1.1245891397069023 1.2758391265049844 1.0541598033631474 1.0 11.134276939767853 -5.737355407350092 24.94200442352159 1.1501537495772138 1.0649787494308103 0.11620321425389613 0.09498308136534245 485.77954987742396 503077.9806228208 0.015742922481153443 0.06090959604140648 1.8308155508699318e-06 5.737355407350092 -0.08517500014640356 IQQFDDGGS(ph)DEEDIWEEK ddPTM_A549_MK2206_60min_R1 2 IQQFDDGGSDEEDIWEEK 18 0 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5;Q5H9R7-3 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 IQQFDDGGS(1)DEEDIWEEK;IQQFDDGGS(1)DEEDIWEEK 169.98 9.331999999999998e-31 6147900.0 2172.9 2150.95 1765.6299999999999 1716.77 3094.2 2529.5 2387.77 2463.7799999999997 2573.33 2807.1000000000004 3404.8 True False 2539.6323976954827 2260.4241675497324 2016.0228835793343 2137.3787270687353 2639.0472788619536 2797.170011053791 2821.5969012044925 2813.0283600098014 1990.4748637635964 2172.9741603843804 2559.294192300461 0.992317493368238 0.8832217000883026 0.7877261198202467 0.8351438195339003 1.0311621410314713 1.0929458674461772 1.102490252856885 1.0991422433859657 0.77774367235774 0.8490521202766335 1.0 11.321530280174573 -5.223108414405182 20.438909952835004 0.9288045893782552 0.992319080815226 0.0 0.12120717635095195 7145.726446918404 3809433.9062960087 0.019028355713748897 4.011277155081441 5.9826223018729755e-06 5.223108414405182 0.06351449143697085 IQQFDDGGS(ph)DEEDIWEEK ddPTM_A549_PD325901_60min_R1 2 IQQFDDGGSDEEDIWEEK 18 0 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5;Q5H9R7-3 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 IQQFDDGGS(1)DEEDIWEEK;IQQFDDGGS(1)DEEDIWEEK 154.84 4.9893999999999995e-23 31420000.0 1975.29 1984.1 1652.8400000000001 1918.71 2068.4 1664.6999999999998 1757.21 1598.88 2157.6 1995.6599999999999 2328.83 True False 2175.8199866683576 2151.3070701995543 1765.0116617343383 2037.2243589934262 1923.1227195926253 1651.1432351295261 1824.0815881322076 1566.9890841029055 2066.92357525611 1869.653687018534 2042.3986736696943 1.0653257930093236 1.0533237697095534 0.8641856678074713 0.9974665501192423 0.9416000628991993 0.8084333663235409 0.8931075071914222 0.7672297795255648 1.0120078914575235 0.9154205352372367 1.0 10.996048790636298 -4.085717632432223 19.036317811144073 0.9663750917583441 0.9479230553865716 0.0 0.09777358340932696 0.0 0.0 0.013413886708537477 0.0 8.208850901145337e-05 4.085717632432223 -0.018452036371772507 IQQFDDGGS(ph)DEEDIWEEKHIAFTPESQR ddPTM_A549_MK2206_60min_R1 4 IQQFDDGGSDEEDIWEEKHIAFTPESQR 28 1 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5;Q5H9R7-3 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR;IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR;IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR;IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR 169.27 3.0657e-57 18778000.0 5395.5 5707.280000000001 5976.4 3942.87 9087.0 6607.0 5888.7 5810.9 9169.300000000001 8279.5 7941.2 True False 6306.12849268994 5997.756174236145 6823.9433864532975 4908.8733270021585 7750.31433747611 7306.148354628352 6958.60056543256 6634.612870134895 7092.468190363285 6409.1551996375165 5969.180874029726 1.0564478821752883 1.0047871392757997 1.1431959477291784 0.8223696735944667 1.298388254776398 1.2239783831003357 1.1657546843164912 1.1114779414710454 1.1881811491457188 1.0737076551863254 1.0 12.543317254668963 -6.76695386220089 24.999981085723668 1.1209090110042168 1.0163132254894682 0.27749871060379006 0.10490333635932354 197.5981693625642 895818.8173212077 0.016823661708819392 0.032441696636255436 1.7101969902838315e-07 6.76695386220089 -0.10459578551474857 IQQFDDGGS(ph)DEEDIWEEKHIAFTPESQR ddPTM_A549_PD325901_60min_R1 3 IQQFDDGGSDEEDIWEEKHIAFTPESQR 28 1 H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5;Q5H9R7-3 H0YEN2 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR;IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR;IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR 194.83 2.7434999999999996e-77 78538000.0 3123.83 3170.3900000000003 3689.0 3808.83 3887.3500000000004 4231.299999999999 4311.41 5007.4 4052.5 4144.73 4323.2300000000005 True False 3440.958921957897 3437.569891784674 3939.357723759093 4044.092778619453 3614.315946629467 4196.841695683043 4475.483066844076 4907.523478770695 3882.1875179483654 3883.031040455951 3791.5001172129478 0.9075455138024033 0.9066516643843755 1.038997125669307 1.0666207710926252 0.9532680561503648 1.1069079693891857 1.1803990316460573 1.2943487609274065 1.023918606865844 1.024141084112714 1.0 11.888553052179645 -5.7739313879440495 5.655908523427602 1.0494954982171938 0.9054867322932474 0.3016166762211968 0.09230243083141024 0.17341199834176554 17.809959883957678 0.014184357442829799 0.049671631709775614 1.682939919495896e-06 5.7739313879440495 -0.1440087659239464 IQQHVGEEAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 IQQHVGEEASPR 12 0 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 IQQHVGEEAS(1)PR 76.85 0.00034489 5625600.0 3091.7 2301.3 2146.9 1977.3 2014.7 1550.6 1719.8 1743.2 2336.7 3534.2 3980.3 True False 3613.503375192196 2418.4263403529612 2451.3627026933577 2461.73858876437 1718.3402988569526 1714.6834627950234 2032.2653985482214 1990.3039383261028 1807.4411809431344 2735.8217653914985 2991.8816593084844 1.207769486453347 0.8083295449967542 0.8193381229055506 0.8228061364343379 0.5743343134949107 0.5731120605857584 0.6792599540912123 0.6652348471517162 0.6041151979790836 0.9144150995677519 1.0 11.546837396750854 -4.783512603471504 1.4953456226218453 0.7578669785762363 2.1658947296906788 0.4958571361739167 0.13408400394319983 3.6128930880718637 2.752478976210214 0.024946319653052787 10.734947293376251 1.6462181914520488e-05 4.783512603471504 1.4080277511144423 IQQHVGEEAS(ph)PR ddPTM_A549_PD325901_60min_R1 1 IQQHVGEEASPR 12 0 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 IQQHVGEEAS(1)PR 65.225 0.0018469 16027000.0 3902.8 4169.9 4006.2 3152.8 4550.5 3921.8 3822.7 3435.0 3906.9 4189.7 4880.2 True False 4299.009382910492 4521.312107265324 4278.084823237641 3347.5412954716835 4230.888578372767 3889.862161068647 3968.1749403617036 3366.4862302946317 3742.706579610727 3925.1616269813258 4279.96633813668 1.0044493445203362 1.0563896418946406 0.9995603902576818 0.7821419681840451 0.9885331435140962 0.9088534473759744 0.9271509696240468 0.7865683896383775 0.8744710317605316 0.9171010510073727 1.0 12.06338373456088 -6.017488172602187 24.267253630387916 0.9191901817467154 1.0298084160316416 0.36592672440635876 0.06824651759070807 474.62789498545675 658615.2918473108 0.010577682272019705 0.02871564310206913 9.605319767644702e-07 6.017488172602187 0.11061823428492623 IQQLEALQR ddPTM_A549_MK2206_60min_R1 2 IQQLEALQR 9 0 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 140.83 0.00011244 13186500.0 2564.59 3432.9 2954.08 3400.1000000000004 4688.200000000001 3272.1 3696.6000000000004 2936.4 4826.1 4625.6 4555.0 False True 2997.4300937944026 3607.619946898568 3373.012964168054 4233.1246526362875 3998.5719904209855 3618.351450155807 4368.224370434561 3352.6436923478486 3732.9960556980614 3580.6737473812777 3423.867788395383 0.8754514715649014 1.0536680064358739 0.9851469661300322 1.2363575097682635 1.1678523347114818 1.0568023281797252 1.2758157266585801 0.9791977668387383 1.090286274589929 1.045797901285021 1.0 11.741411278250158 -3.0076170614382844 13.377840686835999 1.0628084732464276 0.4771818481182588 0.0 0.11271814900117484 0.0 0.0 0.014293429262368157 0.0 0.0009826139796748044 3.0076170614382844 -0.5856266251281688 IQQLEALQR ddPTM_A549_PD325901_60min_R1 2 IQQLEALQR 9 0 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 177.91 1.4296e-07 20106400.0 6814.1 6485.1 7580.200000000001 7131.4 8543.8 7318.6 6775.7 7575.8 8065.799999999999 7715.3 7876.799999999999 False True 7505.86241572471 7031.622136460427 8094.637955445558 7571.890381415492 7943.712962509894 7258.999748074093 7033.5529713053065 7424.6947258998725 7726.822475575054 7228.154641298661 6908.003535149168 1.086545827247124 1.0178949823465298 1.171776753480015 1.0961040107881168 1.1499289081267619 1.050810080096079 1.0181744892742628 1.0747960229206148 1.118531922611155 1.0463449540117498 1.0 12.75405310582378 -7.311509108925107 24.898917157723186 1.0553726353300177 1.1029182304144343 0.2440456679607561 0.04613562482728544 527.1997239039187 262167.37361103256 0.008359172491380537 0.013363072721073597 4.880798641164627e-08 7.311509108925107 0.04754559508441658 IQQLLNT(ph)LK ddPTM_A549_MK2206_60min_R1 2 IQQLLNTLK 9 0 Q9P265;Q14689-5;A0A494C143;Q14689-3;Q14689-2;Q14689-4;Q14689-6;Q14689 Q9P265;A0A494C143 DIP2B;DIP2A Disco-interacting protein 2 homolog B;Disco-interacting protein 2 homolog A 1 IQQLLNT(1)LK;IQQLLNT(1)LK 113.63 0.00024342 7478300.0 4215.1 4138.5 4509.3 3880.3 7211.1 5291.8 4828.1 4742.1 7068.9 5835.9 6952.700000000001 True False 4926.505830699169 4349.131973037295 5148.786545835927 4830.9736741932875 6150.356742486411 5851.774763587452 5705.30327406133 5414.307197072173 5467.80543671371 4517.566136791421 5226.152705241837 0.9426639649771194 0.8321861641499896 0.9851963454247498 0.9243843313931136 1.1768421416996862 1.119709869502687 1.091683231593846 1.0360024864259356 1.0462391256247632 0.8644152575680188 1.0 12.351533564673343 -6.575378056322411 24.999692630467646 1.0454378646669051 0.9184917844856901 0.3609402756418829 0.0810880294743885 65.67542085023972 31273.78705421032 0.009364638171718991 0.019494052476648434 2.658409888234733e-07 6.575378056322411 -0.126946080181215 IQQLLNT(ph)LK ddPTM_A549_PD325901_60min_R1 2 IQQLLNTLK 9 0 Q9P265;Q14689-5;A0A494C143;Q14689-3;Q14689-2;Q14689-4;Q14689-6;Q14689 Q9P265;A0A494C143 DIP2B;DIP2A Disco-interacting protein 2 homolog B;Disco-interacting protein 2 homolog A 1 IQQLLNT(1)LK;IQQLLNT(1)LK 110.66 0.00037342 8433700.0 8651.900000000001 8363.2 8950.8 8459.0 10100.2 8517.2 9014.6 9359.099999999999 10083.8 9951.9 11918.6 True False 9530.234518807854 9067.99621465295 9558.255113532905 8981.493218217125 9390.796795798407 8447.838747068665 9357.655535978392 9172.425408428078 9660.01295335909 9323.535335598117 10452.687758230355 0.9117496608758672 0.8675277042991062 0.9144303680177205 0.8592520341139221 0.898409769143269 0.8081977518573547 0.8952391722033652 0.8775183589699971 0.9241654564638535 0.8919749208290324 1.0 13.351586337826019 -9.606710673682711 0.7123393571485698 0.992051917932586 0.8765518332956207 0.15422216370938002 0.04152513034094557 0.22956439125926334 0.2506908982279861 0.011406719459663692 0.006548682495493014 2.473371352470556e-10 9.606710673682711 -0.11550008463696526 IQQLLNT(ph)LKRPK ddPTM_A549_MK2206_60min_R1 2 IQQLLNTLKRPK 12 2 Q9P265;Q14689-5;A0A494C143;Q14689-3;Q14689-2;Q14689-4;Q14689-6;Q14689 Q9P265;A0A494C143 DIP2B;DIP2A Disco-interacting protein 2 homolog B;Disco-interacting protein 2 homolog A 1 IQQLLNT(1)LKRPK;IQQLLNT(1)LKRPK 82.90799999999999 0.00021071 5357700.0 1579.29 1791.53 2176.5 1388.08 2686.3 2030.6999999999998 2001.2 1908.86 3063.4 3162.8 2975.5 True False 1845.8355420665926 1882.7112247566752 2485.1604277852216 1728.159662313279 2291.1488285200917 2245.587326130436 2364.7921360476225 2179.446750638576 2369.5447912445734 2448.321283340003 2236.601230377708 0.8252859369816565 0.8417733117488855 1.1111325497060278 0.7726722309016322 1.0243886113454261 1.0040177460472963 1.05731504746077 0.9744458337217851 1.0594399927270068 1.094661511442762 1.0 11.127092342024858 -3.500309925708375 0.4017430057850473 1.0276294744097425 2.4775142627351972e-15 0.3640524732702096 0.08723093911577777 14.179672868849707 0.5113402215968249 0.017686228922380604 9.579342667525946 0.00031600217679946083 3.500309925708375 -1.02762947440974 IQQLLNT(ph)LKRPK ddPTM_A549_PD325901_60min_R1 1 IQQLLNTLKRPK 12 2 Q9P265;Q14689-5;A0A494C143;Q14689-3;Q14689-2;Q14689-4;Q14689-6;Q14689 Q9P265;A0A494C143 DIP2B;DIP2A Disco-interacting protein 2 homolog B;Disco-interacting protein 2 homolog A 1 IQQLLNT(1)LKRPK 72.417 0.00067088 3105200.0 1113.8 936.03 1287.0 1091.4 1385.8 1060.1 1521.4 1342.0 1493.7 1640.0 1563.0 True False 1226.8721560637769 1014.9125330975704 1374.343559359704 1158.8132992507594 1288.4661887504633 1051.4668970750351 1579.2977095420244 1315.232757221366 1430.9249834816703 1536.4501201158484 1370.760908673338 0.8950300145713808 0.7404008435576355 1.0026136218677504 0.8453795931285292 0.939964205718033 0.7670680498852824 1.152132147589848 0.9594910016031069 1.0438910056652848 1.1208738959464997 1.0 10.420761239475938 -7.755524443818868 24.999993992760523 1.0246454217481384 0.868169430544132 0.5346158912615656 0.08620939118884026 88.55305795260587 374275.6974389411 0.011291119544276518 0.016502538594119518 1.755802067901921e-08 7.755524443818868 -0.15647599120400646 IQQNQS(ph)IR ddPTM_A549_PD325901_60min_R1 2 IQQNQSIR 8 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 IQQNQS(1)IR;IQQNQS(1)IR 146.27 0.00082948 253700000.0 13368.3 14595.6 15598.599999999999 15528.7 17288.800000000003 15391.2 17988.8 16586.6 15582.9 17509.2 19096.1 True False 14725.43997477769 15825.62243526266 16657.214798001765 16487.872530763492 16074.494331122114 15265.859170136098 18673.373627849065 16255.767251064015 14928.004903994472 16403.666123861232 16747.40076015159 0.8792671881248036 0.9449599171781814 0.9946149278063249 0.9845033726065948 0.9598202468152206 0.9115360281136496 1.1150013005170385 0.9706441903356514 0.8913624936661125 0.9794753441914261 1.0 14.031649582497637 -5.305184936097533 3.6150430452686715 0.9633785984316849 0.8733177546217107 0.17589794930973235 0.05559782886083193 0.38257549728958073 8.80795228772996 0.008406360821844296 0.08559509206782116 4.952392576185252e-06 5.305184936097533 -0.09006084380997426 IQQNQS(ph)IRRPSR ddPTM_A549_MK2206_60min_R1 1 IQQNQSIRRPSR 12 2 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 IQQNQS(0.981)IRRPS(0.019)R 47.037 0.007452600000000001 5452900.0 520.81 727.86 658.17 701.45 704.26 625.14 409.37 452.5 1022.1 1177.6 1308.9 True False 608.7099954180052 764.9049650585777 751.5084028281185 873.3052814892869 600.6642869275811 691.2918998656525 483.7472300288903 516.6432607231309 790.5959819583079 911.5793421212804 983.8640061977422 0.6186932254696829 0.7774498916924937 0.7638336173435298 0.887628042074918 0.6105155622563312 0.702629525534968 0.4916809914597732 0.5251165379245444 0.8035622575661231 0.9265298215799007 1.0 9.942315103771039 -9.562991677250533 1.2033002269466886 0.9567959758985604 0.6834564880825599 0.47223882410784435 0.11398857853076624 0.2550539196045534 0.7607192087798107 0.032601780811941095 0.02410038915553238 2.7353211450580787e-10 9.562991677250533 -0.2733394878160005 IQQNTFTR ddPTM_A549_MK2206_60min_R1 2 IQQNTFTR 8 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-4;O75369-5;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315-2;Q14315 O75369-8;Q60FE5;Q14315-2 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 ; 74.376 0.0062496 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IQQNTFTR ddPTM_A549_PD325901_60min_R1 2 IQQNTFTR 8 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-4;O75369-5;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315-2;Q14315 O75369-8;Q60FE5;Q14315-2 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 ; 113.18 0.0038258000000000003 14738400.0 8188.5 8386.4 8528.9 8170.700000000001 10394.3 8556.0 9003.0 8958.0 9124.5 10326.3 11047.599999999999 False True 9019.790491944901 9093.151360073354 9107.7224424421 8675.385581993934 9664.240226388323 8486.322772732763 9345.614091630636 8779.325662584948 8741.02899630348 9674.295655702615 9688.81523650645 0.9309487560418395 0.9385204628334023 0.9400243703817518 0.8954021075049488 0.9974635691239594 0.8758885958271946 0.9645775942157852 0.9061299496666383 0.9021772820445775 0.9985014080205465 1.0 13.242104546079787 -10.891459464234504 1.129620617884131 1.000194177456461 0.926594977205802 0.42001470253567597 0.03221349673472343 0.3629747853133469 0.8190165499052999 0.020955358916959557 0.004967099592942136 1.2839276028940363e-11 10.891459464234504 -0.07359920025065914 IQS(ph)IKEEKEDITYR ddPTM_A549_PD325901_60min_R1 2 IQSIKEEKEDITYR 14 2 Q13459-2;Q13459;M0R300 Q13459-2 MYO9B Unconventional myosin-IXb 1 IQS(1)IKEEKEDITYR;IQS(1)IKEEKEDITYR 73.21 0.00021797 33893000.0 4472.5 4261.9 4892.3 4234.2 5330.2 4327.5 4725.6 4586.6 4393.299999999999 5030.4 5194.5 True False 4926.5449075195165 4621.065270139351 5224.320897789808 4495.736917434088 4955.825140191745 4292.258274778054 4905.435293947541 4495.116664881904 4208.66487911229 4712.779685506566 4555.609430648532 1.0814238978380064 1.0143681850885757 1.146788586098365 0.9868574086242683 1.08785118997487 0.9421918933395071 1.0767901350246367 0.9867212572351673 0.9238423405654309 1.0345003796419965 1.0 12.153428349394659 -7.527185845944953 0.8164780101744896 0.965984348288378 1.0673156110649968 0.1820272560074282 0.058156685872770425 0.48412233360662466 0.6455947708442454 0.010271023403610148 0.02167981533764275 2.97039465032335e-08 7.527185845944953 0.10133126277661886 IQS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 IQSPKR 6 1 O14524-2;O14524 O14524-2 TMEM194A Transmembrane protein 194A 1 IQS(1)PKR;IQS(1)PKR 51.995 0.038228 23767000.0 4940.700000000001 5239.8 4576.0 4681.4 5529.5 4724.4 3799.0 4593.200000000001 5352.0 5300.9 5764.799999999999 True False 5442.276226848898 5681.376335079698 4886.554877723393 4970.559445769199 5141.126995739421 4685.926052769827 3943.573023892568 4501.5850227043065 5127.074052081344 4966.200269342745 5055.766146078093 1.0764493589306208 1.1237419158492743 0.9665310333853233 0.983146629443098 1.0168838603675419 0.9268478638801042 0.7800149195887381 0.8903863218033372 1.0141042730108407 0.9822844106812917 1.0 12.303714018015702 -5.765500873787223 24.98682833044686 0.9757098015438735 1.1000956550232366 0.36799556928263244 0.06942923616078232 91.42627996365316 562483.5718646093 0.010914294170008906 0.03581955936804265 1.7159282577223146e-06 5.765500873787223 0.12438585347936304 IQS(ph)TPVK ddPTM_A549_MK2206_60min_R1 2 IQSTPVK 7 0 P62820;E7END7;P62820-3;P62820-2 P62820 RAB1A Ras-related protein Rab-1A 1 IQS(0.5)T(0.5)PVK;IQS(0.5)T(0.5)PVK 109.44 0.008677200000000001 492950000.0 21673.0 26664.0 25025.0 28498.0 32490.0 21448.8 26632.0 23950.0 33468.0 29934.0 34967.0 True False 25330.872546023376 28021.083708847746 28573.921298104833 35480.01127932385 27710.764039242757 23718.497779438854 31470.68966980826 27344.98584379887 25887.55143741379 23171.888609934103 26283.72885989492 0.9637472932797804 1.0661000141271344 1.08713346764524 1.3498849979943712 1.054293482745718 0.9024023153590575 1.197344936769146 1.0403769567689944 0.9849268943309776 0.8816058304912351 1.0 14.681882344176943 -8.519817663548949 12.575876642483268 0.9939140763309452 1.0914369896653313 0.18484531333831133 0.11474150098843405 0.34990071199972994 1362.185725637599 0.01824180680815887 0.021100504544461322 3.0212198988189184e-09 8.519817663548949 0.09752291333438612 IQSSLSSAS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 IQSSLSSASPSK 12 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 IQSSLSS(0.001)AS(0.99)PS(0.009)K;IQSSLSSAS(0.986)PS(0.014)K 199.31 1.4384999999999999e-24 73898000.0 9183.4 9257.9 9161.9 8176.099999999999 11556.7 8409.3 8587.5 9648.8 13337.1 13495.0 13029.3 True False 10733.33340742634 9729.087566311942 10461.195186457813 10179.244867039079 9856.72473906792 9299.166544358428 10147.737591599524 11016.546948210711 10316.268144972251 10446.47012731546 9793.7652196136 1.0959353391411817 0.9933960380046551 1.0681484548463114 1.0393596986227005 1.0064285306051888 0.9494986183388735 1.0361426238069333 1.1248530775628858 1.0533505667781635 1.0666449412524932 1.0 13.257647896212232 -10.87019960316968 1.241621935834502 1.0009622504186948 1.039776211814382 0.0 0.04949615805763789 0.9227689680173047 2.6210483732734615 0.028639182477919353 0.007682133378544802 1.3483430372745229e-11 10.87019960316968 0.03881396139568727 IQSSLSSAS(ph)PSK ddPTM_A549_PD325901_60min_R1 4 IQSSLSSASPSK 12 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 IQSSLSS(0.001)AS(0.995)PS(0.005)K;IQSSLSSAS(0.999)PS(0.001)K;IQSSLSS(0.001)AS(0.999)PS(0.001)K;IQSSLS(0.001)S(0.01)AS(0.98)PS(0.009)K 198.48 1.58e-24 107410000.0 29138.800000000003 28280.600000000002 30762.200000000004 29041.199999999997 33770.0 28022.399999999998 30294.3 31294.300000000003 30964.700000000004 32402.800000000003 33426.899999999994 True False 32096.949525149197 30663.905412774322 32849.90788013606 30835.008966649406 31398.111700175446 27794.194865197096 31447.16616417704 30670.110636596597 29663.361341644853 30356.881678103546 29315.603210577625 1.0948759708129767 1.0459926474141321 1.1205605303145592 1.0518292509677423 1.071037545249842 0.9481024376523293 1.0727108679391018 1.0462043170761106 1.0118625609907883 1.0355195988991353 1.0 14.839381122108689 -6.555995099024762 0.32758372845414013 1.0002272037181064 1.1169290589025043 0.284540114382423 0.03807838471515725 2.331130619910519 0.3206310030015214 0.014357338260674079 0.09776109510122356 2.7797446367573555e-07 6.555995099024762 0.1167018551843979 IQST(ph)PVK ddPTM_A549_MK2206_60min_R1 2 IQSTPVK 7 0 P62820;E7END7;P62820-3;P62820-2 P62820 RAB1A Ras-related protein Rab-1A 1 IQS(0.062)T(0.938)PVK;IQS(0.015)T(0.985)PVK 111.61 0.0085444 38823000.0 7512.8 8106.9 8200.9 7971.599999999999 10431.4 8271.5 7526.9 7156.1 11343.0 10673.8 11521.099999999999 True False 8780.776969674918 8519.506582630434 9363.910936009112 9924.642357858716 8896.954878392024 9146.784639822674 8894.440300228285 8170.49908963712 8773.828611048904 8262.581166723947 8660.092903816041 1.0139356548710579 0.9837661878749987 1.081271418218035 1.1460203104155449 1.027350973852903 1.0561993666132812 1.027060609974401 0.9434655240288261 1.013133312597922 0.9540984442653113 1.0 13.080166786652857 -8.001440697804414 11.384693465290296 1.0008891758150276 1.0519848778616094 0.3310685079945982 0.04478643699742314 0.11565390194633718 529.2173947055217 0.006921954005540591 0.00937299675057341 9.966881669695379e-09 8.001440697804414 0.05109570204658187 IQST(ph)PVK ddPTM_A549_PD325901_60min_R1 2 IQSTPVK 7 0 P62820;E7END7;P62820-3;P62820-2 P62820 RAB1A Ras-related protein Rab-1A 1 IQS(0.385)T(0.615)PVK;IQS(0.454)T(0.546)PVK 99.815 0.012017 930080000.0 26515.0 30533.0 31838.0 37689.0 36920.0 27014.0 35585.0 32415.0 32399.0 30691.0 36871.0 True False 29206.78328068868 33106.12306557282 33998.718137447 40016.963932070605 34326.86656708553 26794.006940463165 36939.20664785918 31768.457395924437 31037.382700557457 28753.16502224116 32336.10074452635 0.9032252686073357 1.023813085168496 1.0514167557200629 1.2375321393332936 1.061564807652208 0.8286097062892991 1.1423519161973175 0.982445522634698 0.9598369001188638 0.8891970386104241 1.0 14.980858101165799 -7.061006519085216 24.999985020810602 0.9830451503582 1.0638945745375983 0.14299580924746513 0.10295176326999159 361.5807176799851 148172.1929716566 0.014066392768908736 0.024363731546738997 8.689473856377935e-08 7.061006519085216 0.08084942417939833 IQT(ph)LPNMR ddPTM_A549_PD325901_60min_R1 2 IQTLPNMR 8 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 IQT(1)LPNMR;IQT(1)LPNMR 76.943 0.031721 3123100.0 819.61 898.96 991.23 1399.6 961.37 1105.3 1012.4 1124.5 1663.9 1505.8 844.96 True False 902.8162038350082 974.7185141003944 1058.5008285502101 1486.0501132777738 893.8466877464515 1096.2988032610474 1050.9274360065365 1102.0709653468152 1593.9720693681152 1410.7235310185647 741.0352766427542 1.218317443570567 1.315346981207612 1.4284081499408874 2.0053702706439225 1.206213409698937 1.479415134226548 1.4181881337252158 1.4872044558252695 2.1510070027834227 1.9037198032053482 1.0 9.53339841277299 -8.533329174839121 24.954247476653254 1.5580349494278585 1.4483543932500813 0.06054066630503907 0.33361605829947755 1122.852104975816 2681211.1921870946 0.07556643566274471 0.08572720660567257 2.9286726073710846e-09 8.533329174839121 -0.10968055617777717 IQT(ph)PPPKK ddPTM_A549_PD325901_60min_R1 1 IQTPPPKK 8 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 IQT(1)PPPKK 47.938 0.022546 2194600.0 2354.5 2461.0 2791.4 1924.0 3535.6 3090.9 2616.4 2893.1 3270.1 2892.7 3259.3 True False 2593.527106708711 2668.3971068802525 2980.8411900518113 2042.841110278964 3287.271653157841 3065.72873518463 2715.9685337490173 2835.394850906957 3132.669069079074 2710.054428328728 2858.4267624049976 0.9073267647853228 0.9335194947010433 1.0428258051795658 0.714673238141731 1.150028294022837 1.0725231009960228 0.9501620155080972 0.9919424517706859 1.0959416943197582 0.9480930083542063 1.0 11.481005611187491 -6.79105500615771 24.999971841478835 1.0429912390737341 0.9122410491314241 0.30582273254900616 0.09232969350275429 174.2373249800901 147081.66461116326 0.012374444017555103 0.023387895540324916 1.6178751104952434e-07 6.79105500615771 -0.13075018994231002 IQT(ph)QIR ddPTM_A549_MK2206_60min_R1 1 IQTQIR 6 0 P20020-6;P20020;E7ERY9;H0YHH6;Q01814-6;Q01814;Q01814-8;A0A2R8Y4R4;Q01814-5;Q16720;Q16720-4 P20020-6 ATP2B1;ATP2B2;ATP2B3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2;Plasma membrane calcium-transporting ATPase 3 1 IQT(1)QIR 71.37899999999999 0.05254299999999999 8241500.0 1385.1 2305.4 1634.5 1210.1 2255.8 1550.0 860.5 1472.1 2176.6 1689.2 2165.2 True False 1618.8710175562667 2422.7350128404432 1866.296677792303 1506.5745543234536 1923.9748082401902 1714.0199711932712 1016.841711507586 1680.7746831171742 1683.6035753159683 1307.60854679965 1627.5210835200187 0.9946851281674068 1.4886043796130297 1.1467112141833875 0.9256866590416263 1.1821504665727576 1.0531476295755087 0.6247794402198161 1.0327206818617538 1.0344588419553091 0.8034357035618496 1.0 10.668460517388025 -6.004331064398262 24.868574541309123 1.0007053362255018 1.2606480244142548 0.2723322155407343 0.17745705234686576 154.4996675690614 887146.7581280493 0.021289963015515848 0.0639607889478921 9.900769176058173e-07 6.004331064398262 0.259942688188753 IQT(ph)QIR ddPTM_A549_PD325901_60min_R1 2 IQTQIR 6 0 P20020-6;P20020;E7ERY9;H0YHH6;Q01814-6;Q01814;Q01814-8;A0A2R8Y4R4;Q01814-5;Q16720;Q16720-4 P20020-6 ATP2B1;ATP2B2;ATP2B3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2;Plasma membrane calcium-transporting ATPase 3 1 IQT(1)QIR;IQT(1)QIR 87.181 0.041285 19629000.0 5452.0 5758.8 7166.8 6220.9 8424.2 6684.9 6762.3 7653.400000000001 6278.5 7955.1 8822.8 True False 6005.483026449734 6244.114286510359 7653.182145469408 6605.150864311024 7832.513253912294 6630.460390771529 7019.643026972543 7500.746933023851 6014.636479071884 7452.813628374145 7737.651532337257 0.776137695184588 0.8069779648792538 0.9890833301920054 0.8536376750370216 1.0122597562294697 0.8569086321684887 0.907205887682586 0.9693828807974445 0.7773206707404006 0.9631880677525066 1.0 12.917680042664056 -11.155970523287726 1.5509283226058654 0.9998285904612619 0.873263383612928 0.17753623122005147 0.07850868419691896 0.4618260329377655 1.9967740449215552 0.059133151215074356 0.012657052182429133 6.982797965608718e-12 11.155970523287726 -0.12656520684833394 IQTLTS(ph)SVR ddPTM_A549_MK2206_60min_R1 1 IQTLTSSVR 9 0 E7EWU0;H0Y4R2;P16435 E7EWU0 POR NADPH--cytochrome P450 reductase 1 IQT(0.004)LT(0.06)S(0.468)S(0.468)VR 69.346 0.004051099999999999 4697700.0 1034.0 1134.7 1052.6 860.98 1334.3 1053.9 1074.7 986.45 1471.1 1174.7 1285.4 True False 1208.513921127124 1192.4513833044377 1201.8745078275776 1071.9201386508616 1138.0262375365212 1165.422998477798 1269.9590788578764 1126.2823083764254 1137.898198863973 909.3344541354182 966.1997047647479 1.2507910271214324 1.2341665780106794 1.2439193490751606 1.1094188223870909 1.1778374925229458 1.2061926667236536 1.3143857036957887 1.1656827287591178 1.177704974709168 0.941145448141929 1.0 9.916177601710002 -10.347406111833195 0.5461206410854202 0.9808781725392896 1.2158976209996843 0.7407091872027389 0.0538747734542572 0.4594620944398029 0.22905471871256664 0.05252150230405511 0.012497696021126839 4.4935945916672715e-11 10.347406111833195 0.2350194484603948 IQTLTS(ph)SVR ddPTM_A549_PD325901_60min_R1 2 IQTLTSSVR 9 0 E7EWU0;H0Y4R2;P16435 E7EWU0 POR NADPH--cytochrome P450 reductase 1 IQT(0.002)LT(0.052)S(0.473)S(0.473)VR;IQTLT(0.023)S(0.488)S(0.488)VR 84.198 0.0013725 11476300.0 3955.2 4212.3 3595.8999999999996 3780.1 4259.7 4253.7 4496.1 3670.8 3821.7 4560.700000000001 4831.5 True False 4356.728992335654 4567.285304068136 3839.9393979033125 4013.5881917700153 3960.5133671672315 4219.059277509741 4667.201545860325 3597.5830143131107 3661.087239319744 4272.736623666071 4237.256129401941 1.0281958086283012 1.077887473541227 0.9062325430974817 0.947213968001624 0.9346882147825769 0.9957055105151815 1.101467884717903 0.8490360045383626 0.8640231148444835 1.0083734598949388 1.0 12.048914622580245 -8.278001171555374 24.961353259773002 0.9274881068199043 0.9936885440665832 0.17495254658240988 0.07082186671205183 1221.131509836508 1840442.6758726835 0.012840181908869455 0.015543792527306536 5.272284391663352e-09 8.278001171555374 0.0662004372466789 IQTLTSS(ph)VR ddPTM_A549_MK2206_60min_R1 1 IQTLTSSVR 9 0 E7EWU0;H0Y4R2;P16435 E7EWU0 POR NADPH--cytochrome P450 reductase 1 IQTLT(0.018)S(0.168)S(0.814)VR 92.866 0.00099279 4643400.0 1370.9 941.89 888.62 660.24 1647.4 986.64 742.17 563.69 1650.4 1489.1 1500.2 True False 1602.2744047129358 989.8281778625343 1014.6396780787983 821.9988296393002 1405.0696422975832 1091.0455899213734 877.0126821959146 643.5947837282247 1276.5870351472372 1152.7112757751352 1127.658936586335 1.420885653212986 0.8777726542556885 0.8997753178370845 0.7289427706995049 1.2460058593168515 0.9675315421382658 0.7777286675444792 0.570735319738186 1.1320683885251153 1.022216237885401 1.0 10.139115071459958 IQTQPGYANTLR ddPTM_A549_MK2206_60min_R1 2 IQTQPGYANTLR 12 0 F8VVM2;Q00325-2;Q00325 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial 0 ; 96.103 0.00071282 5306500.0 5674.6 6080.3 5681.5 6060.299999999999 8189.7 6274.7 5928.6 5638.200000000001 10010.8 8902.0 10444.099999999999 False True 6632.333749350079 6389.761298938908 6487.222132075228 7545.073772057207 6985.005978829989 6938.684589191233 7005.749878958594 6437.432116263331 7743.36978396265 6891.03201729249 7850.541727503884 0.8448249789073932 0.8139261621338534 0.8263406981645163 0.9610895698603207 0.8897482774161246 0.8838478706357273 0.8923906301159301 0.8199984586681692 0.9863484652064501 0.8777778981990744 1.0 12.938576495432894 -8.794042584515319 12.962070993085801 0.9935706333619692 0.8687996679827477 0.285577535107426 0.05309584848202738 0.5226925531219239 207.200943240987 0.007201193501158609 0.007674069440376221 1.6067836929645853e-09 8.794042584515319 -0.1247709653792215 IQVERPQMT(ph)FGR ddPTM_A549_MK2206_60min_R1 1 IQVERPQMTFGR 12 1 Q7RTT4 Q7RTT4 SSX8 Protein SSX8 1 IQVERPQMT(1)FGR 43.549 0.029363999999999998 100540000.0 10433.0 11509.0 10115.0 8781.8 14510.0 10867.0 9925.9 9973.7 17286.0 15790.0 15662.0 True False 12193.835337639548 12094.758941086433 11549.459098115103 10933.341394229978 12375.598221280765 12016.938727069204 11729.30754706931 11387.50251817523 13370.748600069757 12223.02803336873 11772.69315079 1.0357727990915389 1.0273570190075685 0.98103797917642 0.92870350515305 1.0512121621423818 1.02074678861929 0.9963147256821367 0.9672810097331958 1.1357425551495428 1.0382524947189768 1.0 13.523156772214577 -8.737309856061863 24.997678977684537 1.0641006788782563 1.0010216754181278 0.244566528122114 0.04421930352107919 269.636494516503 279337.57760800305 0.009639046976917996 0.010926759533188493 1.8310075873428912e-09 8.737309856061863 -0.06307900346012851 IQVLVEPDHFK ddPTM_A549_MK2206_60min_R1 1 IQVLVEPDHFK 11 0 P17931 P17931 LGALS3 Galectin-3 0 68.069 0.004610800000000001 842270.0 693.65 887.55 826.95 627.17 965.43 625.1 573.94 716.67 1147.9 1018.1 1263.5 False True 810.7211618857157 932.72250396744 944.2239447539581 780.826678154731 823.4165258973874 691.2476670922024 678.2174688003059 818.260167209826 887.9024828196278 788.1105028988413 949.7380791739997 0.8536260466578438 0.9820839286328729 0.9941940472421225 0.8221494907667877 0.8669932731490814 0.7278297903916731 0.7141100095619637 0.8615640302866219 0.9348919478850936 0.8298187891805622 1.0 9.891385888505521 -8.987114019939924 2.190925861447247 0.9756219730055405 0.8527682230863562 0.027377875562201726 0.09300969491133639 0.29363741115609426 2.824712621005924 0.01774221378386884 0.01781397779725113 1.0301156377448275e-09 8.987114019939924 -0.1228537499191843 IQVLVEPDHFK ddPTM_A549_PD325901_60min_R1 1 IQVLVEPDHFK 11 0 P17931 P17931 LGALS3 Galectin-3 0 87.363 0.00033086 1982000.0 1070.1 916.34 839.57 1183.8 954.87 1112.1 1181.0 1454.2 1312.9 1196.9 1019.3 False True 1178.7357642340157 993.5631876955097 896.5482689445436 1256.9206373951342 887.803225322669 1103.0434263155798 1225.943601267997 1425.1948402021696 1257.7233787327352 1121.3275297357675 893.9325618750693 1.3185958477243038 1.1114520603337907 1.0029260675592662 1.4060575607165253 0.9931434016235592 1.233922415804935 1.3714050181777893 1.5942979381048057 1.4069555494148196 1.2543759759502726 1.0 9.804022188612644 -6.250149624158105 24.83603966723973 1.237757996919712 1.1410374368573497 0.0647166932254164 0.18341901881512399 2207.0807096381945 4855286.799664243 0.03067255051084233 0.08035483166075964 5.62147619402019e-07 6.250149624158105 -0.09672056006236218 IQVTSLS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 IQVTSLSPSR 10 0 Q9NXG0-2;Q9NXG0 Q9NXG0-2 CNTLN Centlein 1 IQVT(0.003)S(0.029)LS(0.966)PS(0.001)R 67.952 0.0043318 2862200.0 1452.2 1541.9 1226.9 1435.3 1886.9 1726.9 1396.9 1458.3 2222.6 2055.3 2249.2 True False 1697.2958571187728 1620.3761240126146 1400.8928687570353 1786.948564433065 1609.3395095613148 1909.6394117765542 1650.698648233523 1665.0184908564465 1719.1846487628745 1591.006302532157 1690.661565237958 1.0039240803820373 0.9584272555368284 0.8286063263997261 1.0569522612774098 0.9518992698782992 1.1295219877479 0.9763625566310131 0.9848325206482693 1.0168709599315353 0.9410554632844127 1.0 10.723372176214188 -6.295546080406301 24.999690749563282 1.011517845057651 0.9331298965392573 0.22745825703671685 0.06266423371042648 557.3485568237795 408526.8860223157 0.007567135970066609 0.017585167147407575 5.063536205002444e-07 6.295546080406301 -0.0783879485183937 IQVTSLSPS(ph)R ddPTM_A549_PD325901_60min_R1 2 IQVTSLSPSR 10 0 Q9NXG0-2;Q9NXG0 Q9NXG0-2 CNTLN Centlein 1 IQVT(0.001)S(0.003)LS(0.355)PS(0.642)R;IQVTSLS(0.13)PS(0.87)R 123.01 4.1205e-12 6573200.0 1776.1 2155.1 1783.9 1843.2 2699.8 2050.6 1741.3 1855.6 2140.6 2363.0 1988.4 True False 1956.4083645042854 2336.717840324107 1904.966181462142 1957.0502777890788 2510.1753618043726 2033.9005934742631 1807.5661243759228 1818.5886023099597 2050.6380261370196 2213.7997767278985 1743.8394055061215 1.1218970957572032 1.339984538109409 1.0923977147478532 1.1222651991976729 1.439453285594171 1.1663348052878504 1.036543914920483 1.0428647251391499 1.1759328408695149 1.2694975063287885 1.0 10.768051469531521 -7.538793810273032 11.02740333295071 1.0793315440531916 1.225399554300053 0.17142182915006454 0.1179125992729545 0.40886762675091176 277.11654010797156 0.016682971825099337 0.024876758348774914 2.892052614534491e-08 7.538793810273032 0.14606801024686145 IQVWHEEHR ddPTM_A549_MK2206_60min_R1 2 IQVWHEEHR 9 0 P26038 P26038 MSN Moesin 0 ; 85.73100000000001 0.0012282999999999999 10390400.0 320.46 149.42 188.827 220.31 458.4 129.4 158.37 78.585 437.09000000000003 301.47 288.69 False True 374.54581350522056 157.02483977557864 215.6055079703194 274.2859598900916 390.969967238808 143.09302211123176 187.1437790255158 89.72466440646906 338.0898128893029 233.36771761999196 217.00030556133106 1.726015143325972 0.7236157542238968 0.9935723703825963 1.2639888187280446 1.8017023811439181 0.6594139199070814 0.862412513850692 0.4134771339347726 1.5580153770509237 1.0754257558132099 1.0 7.761553263926077 -4.279710993019152 15.64039723645614 1.163157306791253 1.1298695214991223 0.0 0.4320276502460553 0.0 0.0 0.05706910835394594 0.0 5.251568165127136e-05 4.279710993019152 -0.03328778529213072 IRAEAMQEASEAVPS(ph)GMLS(ph)VLGQPQS(ph)K ddPTM_A549_MK2206_60min_R1 1 IRAEAMQEASEAVPSGMLSVLGQPQSK 27 1 Q8IVS2 Q8IVS2 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial 3 IRAEAMQEAS(0.023)EAVPS(0.982)GMLS(0.995)VLGQPQS(1)K 41.748999999999995 0.010325 24610000.0 2081.2 2662.4 2161.9 2002.3 3029.4 2642.0 2367.6 2354.7 4214.1 3924.8 4698.7 True False 2432.4556795452345 2797.9047879701548 2468.4899282466686 2492.8635898866632 2583.7792730219153 2921.574686382338 2797.7622732892037 2688.4859359663137 3259.6130785348814 3038.1849541080173 3531.8831124771423 0.6887135281889872 0.7921849899522297 0.6989160880002493 0.7058171265861213 0.7315585456081928 0.8272002762665736 0.7921446390469442 0.7612046747721222 0.9229108027441769 0.8602167334969186 1.0 11.786221882506906 -8.75400114616058 0.6239421920397823 0.9919934418937413 0.7245953046258619 0.6319739214103949 0.057033702904168315 0.15961784279203953 0.13534781385037897 0.012900429426147251 0.012889734566446431 1.7619713963299325e-09 8.75400114616058 -0.2673981372678794 IRAEAMQEASEAVPS(ph)GMLS(ph)VLGQPQS(ph)K ddPTM_A549_PD325901_60min_R1 1 IRAEAMQEASEAVPSGMLSVLGQPQSK 27 1 Q8IVS2 Q8IVS2 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial 3 IRAEAMQEAS(0.049)EAVPS(0.952)GMLS(1)VLGQPQS(1)K 53.091 0.00095394 86294000.0 7357.7 7834.5 8657.6 8078.8 9933.3 10522.0 7494.4 8747.2 7920.3 9976.1 9722.6 True False 8104.648287547539 8494.740810180137 9245.156798378066 8577.809127713974 9235.619276024667 10436.312320557985 7779.6034930930355 8572.730233954351 7587.43733458518 9346.207343468128 8526.781836639413 0.9504932157079504 0.9962423072299568 1.0842492484857311 1.0059843551825494 1.0831307113241004 1.2239450381752888 0.9123727617451444 1.0053887150152592 0.8898359873571658 1.0961002078542292 1.0 13.057785629446563 IRAEAMQEASEAVPSGMLS(ph)VLGQPQS(ph)K ddPTM_A549_PD325901_60min_R1 1 IRAEAMQEASEAVPSGMLSVLGQPQSK 27 1 Q8IVS2 Q8IVS2 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial 2 IRAEAMQEASEAVPS(0.01)GMLS(0.99)VLGQPQS(1)K 57.78 0.00063611 217340000.0 9272.7 10550.0 10969.0 11618.0 15372.0 14601.0 11687.0 11351.0 13273.0 13322.0 15205.0 True False 10214.057677799052 11439.085525228214 11713.422301955394 12335.617473607594 14292.323750521085 14482.094296946127 12131.755180371796 11124.595400312768 12715.181968100842 12480.846646453263 13334.881392436411 0.7659653938573836 0.8578318163157043 0.878404685968882 0.9250639065004655 1.0717998405765903 1.0860309792601843 0.9097760095003895 0.834247795156444 0.9535279387871373 0.9359548299793983 1.0 13.702917372394435 -5.879235117079922 1.4517226139972208 0.9743923703713813 0.781979330894613 0.4464515547959008 0.06889051856819225 0.3599210313566192 1.2735920488189858 0.010612033775476789 0.07160999910862458 1.3205805086036805e-06 5.879235117079922 -0.19241303947676824 IRAEEEDLAAVPFLAS(ph)DNEEEEDEK ddPTM_A549_PD325901_60min_R1 2 IRAEEEDLAAVPFLASDNEEEEDEK 25 1 O95714;A0A3B3IRP6;A0A0J9YVP0 O95714 HERC2 E3 ubiquitin-protein ligase HERC2 1 IRAEEEDLAAVPFLAS(1)DNEEEEDEK;IRAEEEDLAAVPFLAS(1)DNEEEEDEK 91.66 5.9128000000000005e-09 9730500.0 994.8499999999999 950.05 1022.62 1044.57 1473.69 1220.6100000000001 1327.42 1002.49 1388.6100000000001 1035.74 1343.33 True False 1095.8464396301388 1030.1140477007646 1092.0211427136142 1109.0907165094059 1370.1830983545035 1210.6697568519555 1377.9356944920949 982.4945505118093 1330.2515507213516 970.343199639506 1178.1089260704775 0.9301741251424679 0.8743792911718763 0.926927144467019 0.9414161050529696 1.163036004594821 1.027638217537391 1.169616547332452 0.8339590073295429 1.129141390311283 0.8236447226285234 1.0 10.202257219277568 -6.587189660058331 9.009049204110926 1.0564921157252742 0.9113713119511871 0.11892664940788034 0.11247598514177158 0.24639940639532792 31.983277859522047 0.012407729455705447 0.02587082017455404 2.5870828675410136e-07 6.587189660058331 -0.1451208037740871 IRAEEEDLAAVPFLAS(ph)DNEEEEDEKGNSGSLIR ddPTM_A549_MK2206_60min_R1 2 IRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIR 33 2 O95714;A0A3B3IRP6;A0A0J9YVP0 O95714 HERC2 E3 ubiquitin-protein ligase HERC2 1 IRAEEEDLAAVPFLAS(1)DNEEEEDEKGNSGSLIR;IRAEEEDLAAVPFLAS(1)DNEEEEDEKGNSGSLIR 138.24 8.4318e-31 66500000.0 2182.01 2917.8 2666.6 2015.22 3337.9 2786.4 2341.0 2902.0 4655.1 3709.6 3851.8 True False 2550.2799429773668 3066.3035570685543 3044.763977363689 2508.948990466662 2846.899331689391 3081.2549985373744 2766.329397605179 3313.3673870022676 3600.727282667172 2871.5987835709084 2895.291755728065 0.8808369443016841 1.0590654813982592 1.0516259618188417 0.8665617154136334 0.9832858212154496 1.064229534878963 0.9554579057990458 1.1443984463559085 1.2436492023795076 0.9918167237860288 1.0 11.499493019174956 -8.262860885511998 24.97395319962267 1.1204720259356171 0.9849214834824077 0.2575690759664905 0.08982851395898825 129.30461951774777 2271701.5667028828 0.017020672827285598 0.021156779210492985 5.459327078595193e-09 8.262860885511998 -0.1355505424532094 IRAEEEDLAAVPFLAS(ph)DNEEEEDEKGNSGSLIR ddPTM_A549_PD325901_60min_R1 2 IRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIR 33 2 O95714;A0A3B3IRP6;A0A0J9YVP0 O95714 HERC2 E3 ubiquitin-protein ligase HERC2 1 IRAEEEDLAAVPFLAS(1)DNEEEEDEKGNSGSLIR;IRAEEEDLAAVPFLAS(0.999)DNEEEEDEKGNSGSLIR 167.64 4.8955e-63 504400000.0 3750.2 3799.2 3732.6000000000004 3371.1 4321.4 3811.1000000000004 4398.700000000001 3909.4 4076.9 3404.1 3790.5 True False 4130.917543248675 4119.371917293559 3985.9166819471916 3579.3251906764094 4017.879772020676 3780.063665166178 4566.094935561001 3831.4239501350285 3905.562070801651 3189.164545052658 3324.2925299592403 1.2426456173817306 1.2391725096900745 1.1990270549373294 1.0767178755836797 1.2086420601709018 1.1371031974771866 1.3735538898608861 1.1525531870632355 1.1748551114572152 0.9593513556076129 1.0 11.698831626142207 -10.331726855164902 0.6367948184161771 0.9922142903780545 1.2036542434559383 0.5748714024735992 0.07254930208047605 0.5103405051613946 0.3652343981816196 0.05595081678636056 0.015306865122355384 4.658790109840192e-11 10.331726855164902 0.21143995307788377 IRAENGTGSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 IRAENGTGSSPR 12 1 M0R102;M0R050;Q9NQT4 M0R102 EXOSC5 Exosome complex component RRP46 1 IRAENGTGS(0.198)S(0.801)PR;IRAENGT(0.019)GS(0.222)S(0.759)PR 79.88600000000001 0.00071882 66737800.0 3728.3 3901.2 4719.3 4193.1 6747.700000000001 4866.4 4508.9 4849.46 7831.1 7221.0 7675.3 True False 4357.5458918164995 4099.754416627543 5388.567703582265 5220.409688235414 5755.122268624138 5381.35921794512 5328.108765853053 5536.885805848386 6057.368353696996 5589.771084797693 5769.311182496394 0.7552974270198716 0.7106141941287295 0.934005383507606 0.9048584004401945 0.9975406225416815 0.9327559300790902 0.9235259803662677 0.9597134962396954 1.0499292137464422 0.9688801501566754 1.0 12.494183365592123 -4.2467473444010375 0.37569752405634727 1.0205901952521246 0.12806297688439242 0.7182696998179874 0.05180945876299554 3.6368607357851173 0.1957632272797234 0.012780903891352034 1.726437695962575 5.665688008215098e-05 4.2467473444010375 -0.8925272183677322 IRAENGTGSS(ph)PR ddPTM_A549_PD325901_60min_R1 4 IRAENGTGSSPR 12 1 M0R102;M0R050;Q9NQT4 M0R102 EXOSC5 Exosome complex component RRP46 1 IRAENGT(0.011)GS(0.137)S(0.852)PR;IRAENGT(0.005)GS(0.09)S(0.905)PR;IRAENGT(0.004)GS(0.173)S(0.823)PR;IRAENGT(0.001)GS(0.205)S(0.794)PR 88.09200000000001 0.00012063 151703000.0 13710.400000000001 13543.199999999999 14531.099999999999 14592.6 18574.4 17130.8 17449.6 15343.1 15937.099999999999 17116.7 17946.9 True False 15102.26971493697 14684.532993864525 15517.267828602793 15493.951759800839 17269.798222201323 16991.292444498635 18113.654076787505 15037.069834070906 15267.319109758135 16035.948640845709 15739.545074772588 0.9595111957297263 0.93297061154588 0.9858777845792975 0.9843964159189462 1.0972234673975063 1.079528815081978 1.150837205950771 0.9553687709927772 0.9699974832327689 1.018831774658354 1.0 13.942106222310073 -6.0348744047942615 2.5075597661376423 1.009754958628224 0.9467725171290242 0.18169934571182556 0.05894454299737717 0.4844692565991632 5.956120574855594 0.00939902156437024 0.03376987661863879 9.228382675341817e-07 6.0348744047942615 -0.06298244149919974 IRANSIS(ph)R ddPTM_A549_PD325901_60min_R1 1 IRANSISR 8 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 IRANS(0.439)IS(0.561)R 70.41199999999999 0.0018429000000000002 15461000.0 2176.5 2450.6 2783.8 2694.5 2657.1 3706.5 3559.8 3420.9 3263.8 3222.6 3230.6 True False 2397.4566777453842 2657.1206623814483 2972.7254083492962 2860.9331453465015 2470.4744624973696 3676.315492886158 3695.2701369973065 3352.6674658558663 3126.6338361702333 3019.1244860276443 2833.2566804607072 0.8461840730065944 0.9378326646879668 1.0492255886487172 1.0097684283519606 0.8719557530861105 1.2975582192180215 1.3042482746026491 1.1833264133734256 1.103547679859991 1.0656021767631423 1.0 11.468245594056516 -5.3848037404726155 0.8150280725065076 1.086536464450488 0.7406474919168415 0.3346049996574745 0.11934504095074636 2.3330110795493004 1.2449545847117822 0.021005609954089136 0.6968626577141037 4.122837898077108e-06 5.3848037404726155 -0.3458889725336465 IRDS(ph)AGQK ddPTM_A549_PD325901_60min_R1 3 IRDSAGQK 8 1 P52209-2;P52209;K7EPF6;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 1 IRDS(1)AGQK;IRDS(1)AGQK;IRDS(1)AGQK 149.33 0.0001916 89254900.0 22657.300000000003 21534.8 23087.199999999997 20733.899999999998 24112.6 19265.1 17619.199999999997 18859.0 20344.3 26772.100000000002 28229.4 True False 24957.452416577304 23349.613172387173 24654.03622661178 22014.58591289658 22419.014159954124 19108.211412923545 18289.708297596186 18482.842450400698 19489.299820208995 25081.70503704484 24757.36276091051 1.008082026248075 0.9431381443121221 0.9958264321084364 0.8892136907108494 0.9055493663223123 0.7718193410767309 0.7387583432947015 0.7465594227016508 0.7872122733113044 1.0131008411221585 1.0 14.595570021468534 -6.4242849208271355 2.311714816299789 0.8636265892009125 0.9800654791053244 0.27869214573368173 0.08996731183658384 0.42356802199620164 4.399177276907184 0.015706425846748667 0.04261144853193652 3.764567418308712e-07 6.4242849208271355 0.11643888990441187 IRDSAGQK ddPTM_A549_MK2206_60min_R1 2 IRDSAGQK 8 1 P52209-2;P52209;K7EPF6;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 96.66799999999999 0.0025057 8515600.0 3746.8 3274.7 1890.08 1455.0 3085.1 3667.1000000000004 3419.5 3316.8999999999996 3837.6 5424.0 5121.2 False True 4379.168239534924 3441.3682426254018 2158.121764919959 1811.4750653174324 2631.2858768072574 4055.1500879760288 4040.7788872750607 3787.0807325802293 2968.389727387926 4198.7146328683975 3849.4647020703464 1.1376044667144731 0.8939861796302588 0.5606290567515173 0.47057843246183606 0.6835459162392321 1.0534322046894102 1.0496989062146278 0.9837941183207719 0.7711175337681225 1.090726882262413 1.0 11.910442126479703 -7.24408481808216 24.35970424019601 0.920299676487307 0.7313458693675783 0.24848238254944433 0.18758744128920593 832.2884853120587 1168239.791208678 0.029344876543888794 0.050742990387211154 5.7005292958583554e-08 7.24408481808216 -0.18895380711972876 IRDSAGQK ddPTM_A549_PD325901_60min_R1 3 IRDSAGQK 8 1 P52209-2;P52209;K7EPF6;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ;; 69.915 0.007645399999999999 7029800.0 3664.1000000000004 3649.5 2779.7 3020.8 2931.5 2957.8 2442.8 2450.3 3318.1000000000004 3894.3 4864.6 False True 4036.0767346321436 3957.0561729213637 2968.3471576939955 3207.387955265434 2725.6015531259795 2933.712657455464 2535.76209075145 2401.4268442768357 3178.6517960035712 3648.413233394605 4266.285039240132 0.9460401022222859 0.927518001381866 0.6957685973609226 0.7517987958527734 0.638870007056874 0.6876504102449721 0.5943724030223481 0.5628847632516728 0.7450631560636934 0.855173341639738 1.0 12.05876464297079 -10.334575233445875 0.926517550443338 0.985790205085144 0.7243840919161434 0.26448955898294835 0.12121832534270084 0.40988892531754756 0.6797127589947165 0.062243087339245454 0.02366509329106119 4.628334795358886e-11 10.334575233445875 -0.26140611316900064 IREESGAR ddPTM_A549_PD325901_60min_R1 2 IREESGAR 8 1 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 0 ; 66.568 0.008508799999999999 21226900.0 2759.2 2588.1000000000004 2773.5 3213.1000000000004 3078.8999999999996 3220.7 3046.1000000000004 3582.5 3338.1000000000004 3113.6 3575.5 False True 3039.311952784315 2806.2082699377393 2961.726388410365 3411.565889520448 2862.648685628375 3194.471687019681 3162.021002389878 3511.0442270831186 3197.8112655554423 2917.006764629699 3135.736166961945 0.9692498957043792 0.8949121101143314 0.9445075193554407 1.0879633068191896 0.9129112059200598 1.0187310146422943 1.0083823491608987 1.119687384441144 1.019796020866653 0.9302462354337158 1.0 11.614588464450721 -7.374221307176074 13.598159840228558 1.0192883501608603 0.9642261717569921 0.15998965517667396 0.061542562767657814 1.1982483063693579 138.8506368725868 0.00829471671175884 0.013260233102793544 4.224532862508709e-08 7.374221307176074 -0.05506217840386818 IRERS(ph)ESLDPDSSMDTTLILK ddPTM_A549_MK2206_60min_R1 4 IRERSESLDPDSSMDTTLILK 21 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 IRERS(0.485)ES(0.485)LDPDS(0.011)S(0.011)MDT(0.005)T(0.001)LILK;IRERS(0.499)ES(0.499)LDPDS(0.001)S(0.001)MDTTLILK;IRERS(0.732)ES(0.178)LDPDS(0.069)S(0.018)MDT(0.002)T(0.002)LILK;IRERS(0.817)ES(0.154)LDPDS(0.012)S(0.012)MDT(0.003)T(0.001)LILK 76.82600000000001 9.216700000000001e-05 11064700.0 3207.2799999999997 4565.44 3851.73 3313.77 6084.1900000000005 4634.72 4343.8 4399.82 6802.2 5718.54 7352.37 True False 3748.5904535324994 4797.801395429115 4397.963232029943 4125.64379876079 5189.2137106777545 5125.162994121858 5133.012232942067 5023.507958883636 5261.512560881321 4426.717842301483 5526.573613910989 0.6782847231233632 0.8681330840057074 0.7957847916763092 0.7465102406988834 0.9389567701796169 0.9273671812171765 0.9287874534090554 0.908973318701287 0.9520388089353448 0.8009877641291073 1.0 12.432169594730835 -2.8298660124434227 0.1943542086889185 1.0105173898948432 2.3651699331820603e-19 0.3441076314760567 0.07678332168890335 12.89861756339154 0.1872910502816363 0.04351156823892083 3.7231259455471006 0.001479564789761131 2.8298660124434227 -1.0105173898948432 IRERS(ph)ESLDPDSSMDTTLILK ddPTM_A549_PD325901_60min_R1 5 IRERSESLDPDSSMDTTLILK 21 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 IRERS(0.951)ES(0.049)LDPDSSMDTTLILK;IRERS(0.961)ES(0.039)LDPDSSMDTTLILK;IRERS(0.484)ES(0.484)LDPDS(0.012)S(0.012)MDT(0.007)T(0.001)LILK;IRERS(0.808)ES(0.191)LDPDSSMDTTLILK;IRERS(0.979)ES(0.021)LDPDSSMDTTLILK 124.51 1.2806e-15 50962200.0 11504.0 12069.6 12322.600000000002 13096.599999999999 14243.7 13837.099999999999 13636.500000000002 14927.249999999998 14099.099999999999 15297.199999999999 15904.9 True False 12671.877611202799 13086.747550264887 13158.885737813443 13905.547237463352 13243.271650097402 13724.41524527588 14155.444469679122 14629.514288548902 13506.563857940964 14331.332181363516 13948.69812946806 0.9084631048421754 0.9382056611159851 0.9433773399980564 0.9969064573909197 0.9494270739230944 0.9839208733237721 1.0148219094206568 1.0488085807551135 0.9683028288788441 1.0274315243145955 1.0 13.76784285717334 -5.675096474812409 0.7732689833180878 0.9914027132196723 0.8874310888132312 0.5740525691431886 0.026528999673553762 0.9985501498433675 0.5988321109491643 0.004244047907327925 0.07861375044095996 2.1130195984284145e-06 5.675096474812409 -0.10397162440644114 IRES(ph)PK ddPTM_A549_MK2206_60min_R1 1 IRESPK 6 1 A0A087WW77;Q15334;P51587;A0A590UJI7 A0A087WW77;P51587 LLGL1;BRCA2 Lethal(2) giant larvae protein homolog 1;Breast cancer type 2 susceptibility protein 1 IRES(1)PK 71.708 0.04083 18639000.0 7005.1 8477.9 7685.0 4563.2 3597.9 3697.7 4479.0 5337.5 3912.4 11443.0 11417.0 True False 8187.389621748179 8909.388897961306 8774.848558478945 5681.184204849831 3068.6536761093103 4088.988159665394 5292.776322884922 6094.106970408205 3026.2476468189834 8858.018352491354 8581.84380682988 0.9540361961880762 1.0381672165683962 1.0224898933135396 0.6620004200412559 0.357575102178755 0.47646965520523266 0.6167411621582595 0.7101162765929386 0.3526337364017902 1.032181259864189 1.0 13.067071928330234 -6.272444016547747 7.745029890857686 0.6422765293022752 1.0086757287028154 0.3613295978892218 0.2093410624400354 0.14466580411644098 64.69084249137393 0.03543046910800355 0.08606979457811666 5.340181076295257e-07 6.272444016547747 0.3663991994005402 IRIDS(ph)LSAQLSQLQK ddPTM_A549_MK2206_60min_R1 2 IRIDSLSAQLSQLQK 15 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IRIDS(0.975)LS(0.025)AQLSQLQK;IRIDS(0.927)LS(0.073)AQLSQLQK 127.49 9.6569e-10 18078500.0 2205.1 2349.86 1866.26 2361.2 3254.6 2194.9 2006.77 2065.05 4108.7 2952.7 3205.3 True False 2577.266970481065 2469.457836936429 2130.9237307413036 2939.694105998295 2775.852651342549 2427.162861143297 2371.3741329483764 2357.7771614503895 3178.086010245669 2285.6830192607877 2409.3355482203547 1.0697003048764844 1.0249538877058795 0.8844445649404464 1.2201264818300994 1.1521237269723268 1.00739926530205 0.9842440313886465 0.9786005785669628 1.3190715641883708 0.9486777468373376 1.0 11.234419616404534 IRIDS(ph)LSAQLSQLQK ddPTM_A549_PD325901_60min_R1 2 IRIDSLSAQLSQLQK 15 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IRIDS(0.99)LS(0.01)AQLSQLQK;IRIDS(0.5)LS(0.5)AQLSQLQK 112.55 4.790600000000001e-07 39238000.0 3816.4 3831.3 3537.3 3892.6 4804.0 4279.9 4207.2 4189.4 4461.0 4397.6 4219.9 True False 4203.838118514809 4154.177096948518 3777.362449512883 4133.037061263977 4466.583612900295 4245.045913396324 4367.307298268175 4105.8391304792785 4273.519683545382 4119.934785500892 3700.879052150112 1.135902594836892 1.1224838851556231 1.020666278547616 1.1167717191035447 1.2068980234048257 1.1470371913208204 1.1800729601608801 1.1094226729981613 1.154730976972236 1.113231404605703 1.0 11.85365227257948 -10.761145136622712 0.8990913120741751 0.9959699573398793 1.133067989095004 0.10945921094205813 0.05530228700991763 0.4056740657245747 0.5542134459894972 0.037792268733379264 0.008550327281838943 1.7332246756020246e-11 10.761145136622712 0.1370980317551247 IRKPS(ph)LLYEGFESPTMASVPALQLTPANPPPPEVSNPK ddPTM_A549_PD325901_60min_R1 1 IRKPSLLYEGFESPTMASVPALQLTPANPPPPEVSNPK 38 2 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;A0A0G2JHL0;A0A140T9V2;A0A140T9F7;U3KQA6;E9PIQ3;E9PKQ9;A0A140T9X8;H0Y799 P25440-2 BRD2 Bromodomain-containing protein 2 1 IRKPS(0.193)LLY(0.18)EGFES(0.193)PT(0.193)MAS(0.193)VPALQLT(0.049)PANPPPPEVSNPK 46.898 0.002582 2623000.0 1284.3 1486.6 1479.4 1792.6 1839.6 1597.5 2190.7 2156.1 1962.0 1698.2 1831.2 True False 1414.6811905483103 1611.880999223153 1579.8009803548935 1903.3248307100166 1710.3928422754748 1584.4904896494372 2274.0682872970374 2113.094894072272 1879.5439630387891 1590.9753621833743 1605.9740089332174 0.8808867283524874 1.0036781356716098 0.9837027072463584 1.1851529477580507 1.0650190057631248 0.9866227478375875 1.4160056605197537 1.3157715394634026 1.170345193996815 0.990660716383694 1.0 10.6492328291446 -5.675188956111955 1.165210312380386 1.121182063770845 0.8642140843547093 0.2719649465471796 0.13231360673945022 1.0585828463703606 1.8411698421425955 0.021340988121323137 0.27480362204564 2.1125696871317193e-06 5.675188956111955 -0.2569679794161357 IRKS(ph)NQIPTEVR ddPTM_A549_MK2206_60min_R1 2 IRKSNQIPTEVR 12 2 Q9BWH2 Q9BWH2 FUNDC2 FUN14 domain-containing protein 2 1 IRKS(0.998)NQIPT(0.002)EVR;IRKS(1)NQIPTEVR 131.4 1.3486e-08 22124000.0 5761.6 4798.9 3806.7 3261.6 5155.8 3269.9 2899.9 3405.8999999999996 5110.799999999999 5401.4 4993.200000000001 True False 6734.0172224042935 5043.143512240829 4346.54730091891 4060.6921464187876 4397.388649846961 3615.9186476160476 3426.7742930864006 3888.696755131297 3953.2119602705393 4181.21998856478 3753.2506346906325 1.7941826639987648 1.3436735254576246 1.1580754188767841 1.0819133976522983 1.171621369807461 0.9634098544325153 0.9130150439230813 1.036087683350736 1.0532768378779982 1.1140263189243218 1.0 11.873924918439299 -2.000000027291889 0.6794019770483994 1.0179410311391714 87.31545111322616 0.9263984196527835 0.0630813682116546 37.367514702188416 0.1993002456052116 0.009406846688669384 4889.051510852934 0.009999999371581048 2.000000027291889 86.29751008208699 up IRKS(ph)NQIPTEVR ddPTM_A549_PD325901_60min_R1 4 IRKSNQIPTEVR 12 2 Q9BWH2 Q9BWH2 FUNDC2 FUN14 domain-containing protein 2 1 IRKS(1)NQIPTEVR;IRKS(1)NQIPTEVR;IRKS(0.998)NQIPT(0.002)EVR;IRKS(1)NQIPTEVR 171.46 2.1692e-16 72786000.0 10359.7 9833.7 10077.9 10956.7 12609.7 10904.0 11717.8 11422.699999999999 11290.8 12392.8 12773.5 True False 11411.40911759194 10662.420410373148 10761.846897335792 11633.470474528865 11724.038173103421 10815.201439209684 12163.7272912262 11194.865287565204 10816.286940814662 11610.316493031516 11202.440477887973 1.018653849588975 0.9517944265286883 0.9606698574813364 1.0384764371202584 1.0465610771371656 0.9654326180583023 1.0858104816745664 0.9993237910669804 0.9655295167302587 1.0364095677141631 1.0 13.451525440564842 -4.915090570895477 19.601224197885937 0.993794843522489 2.1664830908435193 0.0 0.042208713124364354 812.7947682181324 271471.2692615585 0.005449196817313415 18814.379884573424 1.2159323949141146e-05 4.915090570895477 1.1726882473210303 IRLS(ph)DGSLK ddPTM_A549_MK2206_60min_R1 2 IRLSDGSLK 9 1 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 IRLS(1)DGSLK;IRLS(1)DGSLK 76.655 0.00055081 4781300.0 1576.1799999999998 1878.3200000000002 1980.6 1580.13 2485.5 1900.2199999999998 1659.45 1681.67 2553.8999999999996 2357.2 2286.9 True False 1842.200650098791 1973.918465046614 2261.4788620589993 1967.261920934732 2119.886242521941 2101.3000191360507 1960.950584731275 1920.0518723983819 1975.4457277402614 1824.7068828535012 1718.9996147708894 1.07167019368083 1.1482948850513273 1.3155784577417793 1.1444225490399142 1.2332092597964208 1.222397027364148 1.140751032101094 1.1169588729979378 1.1491833452234668 1.0614934797973765 1.0 10.74735350616905 -10.391371432090175 0.4189519237151723 0.9657251816773775 1.1899845602531454 0.42881168726730834 0.0632608003633899 1.0040157772917686 0.26977207885117094 0.09562608512987364 0.019004106346288078 4.060958654906792e-11 10.391371432090175 0.22425937857576783 IRLS(ph)DGSLK ddPTM_A549_PD325901_60min_R1 2 IRLSDGSLK 9 1 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 IRLS(0.997)DGS(0.003)LK;IRLS(0.98)DGS(0.02)LK 77.124 0.00054036 10832300.0 2501.8 2431.02 2338.0 2484.1000000000004 3121.9 2851.7 2598.0 2733.3999999999996 2888.2 2702.8 2969.7 True False 2755.7808942721826 2635.8905870654326 2496.670739536121 2637.53721519957 2902.628513970321 2828.4767006781212 2696.8683116801485 2678.8801926891806 2766.8189979860495 2532.1447467372677 2604.4457264793427 1.058106477802251 1.012073532677756 0.9586188393762727 1.0127057701313513 1.114489921774664 1.0860186764197313 1.0354864700236013 1.028579772445655 1.0623446554696307 0.9722393985764447 1.0 11.346760658032162 -6.54717954231086 24.999267469421977 1.0406149773625268 1.0058161561676848 0.11764753695559704 0.04209096785664474 361.10564949357286 371483.95166070893 0.006025666078942327 0.012543918163776398 2.8367460427047183e-07 6.54717954231086 -0.03479882119484201 IRLS(ph)SSASR ddPTM_A549_MK2206_60min_R1 2 IRLSSSASR 9 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 IRLS(0.985)S(0.012)S(0.002)AS(0.001)R;IRLS(0.989)S(0.009)S(0.002)ASR 63.473 0.0018713 10182200.0 1293.44 1439.28 1248.0500000000002 1078.17 1465.71 1166.6 1480.31 1618.61 1757.28 2211.0 2090.27 True False 1511.7410504281117 1512.5332043380724 1425.0422567872033 1342.3216984008902 1250.1060006142957 1290.048837673593 1749.2631655569949 1848.0529242852303 1359.2588857995247 1711.5335643938108 1571.1982704828142 0.9621580413040858 0.9626622131357652 0.9069779947945725 0.8543299236120007 0.7956386053239163 0.8210605000711803 1.1133306333257755 1.1762060581427074 0.8651097136084789 1.0893173678633652 1.0 10.617649531362641 -7.692352282421036 24.999999979743052 0.9685720160333677 0.8830952306978512 0.26640692106577935 0.10260950039014818 85.48964661730899 30934.247641564707 0.0171127307316243 0.025382278838473604 2.0307091121580486e-08 7.692352282421036 -0.0854767853355165 IRLS(ph)SSASR ddPTM_A549_PD325901_60min_R1 2 IRLSSSASR 9 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 IRLS(0.45)S(0.45)S(0.099)ASR;IRLS(0.452)S(0.452)S(0.094)AS(0.001)R 96.604 0.00024721 21211000.0 2590.5 2897.3 2804.4 2764.8 3250.7 2908.4 2985.3 3198.8 3291.3 3218.7 3505.0 True False 2853.485652974693 3141.4656390752357 2994.7234482271606 2935.575416683618 3022.3820463061993 2884.714954676948 3098.907225118841 3134.9974245899443 3152.978106804058 3015.470732693222 3073.907220025624 0.9282927065543983 1.0219780280320394 0.9742400254364856 0.9549980551004227 0.9832378890996601 0.9384521874583127 1.008132973217392 1.019873795853803 1.0257232509372143 0.9809895084172661 1.0 11.58585790537426 -7.8960899513570935 8.706523004283394 1.013104753329112 0.9699611187609201 0.36397862512320545 0.02569584945574311 0.1848850289991411 14.1533235965016 0.0035999078355577413 0.004979130486468381 1.27031097032027e-08 7.8960899513570935 -0.043143634568191924 IRNPFRGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 IRNPFRGSPK 10 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966-3 ZNF638 Zinc finger protein 638 1 IRNPFRGS(1)PK;IRNPFRGS(1)PK 89.43 0.0001403 43199000.0 1644.15 1964.69 1784.12 1647.79 2660.4 2002.9299999999998 1700.7800000000002 1794.49 3023.2 2971.4 2947.5 True False 1921.642324391839 2064.684329130517 2037.1350436113812 2051.4986239721034 2269.05868421057 2214.8787231626698 2009.7897107470912 2048.864452895142 2338.4500270583653 2300.158676273074 2215.5544031383965 0.8673415203299804 0.931904143814222 0.9194696554170463 0.9259527191325551 1.0241493871675564 0.9996950289395875 0.9071272219270112 0.924763774698047 1.0554694679335717 1.038186502220317 1.0 11.113452037427871 -4.710665467497514 0.26984022458332524 1.0256688712249808 0.7139275157337552 0.45673560882571906 0.043677168565355445 7.904243129406928 0.3359029782859482 0.023341314987184746 0.8594509605285161 1.946859149455056e-05 4.710665467497514 -0.3117413554912256 IRNPFRGS(ph)PK ddPTM_A549_PD325901_60min_R1 4 IRNPFRGSPK 10 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966-3 ZNF638 Zinc finger protein 638 1 IRNPFRGS(1)PK;IRNPFRGS(1)PK;IRNPFRGS(1)PK;IRNPFRGS(1)PK 74.46 0.00033145 157118000.0 13168.6 14416.400000000001 14154.599999999999 13795.16 17113.4 17322.9 13571.21 15671.800000000001 18811.5 17873.2 16662.6 True False 14505.466577789048 15631.320622360197 15115.21627452438 14647.255702118475 15911.413822024952 17181.828045789196 14087.669823001068 15359.213654710737 18020.91807375341 16744.6831017406 14613.205832924095 0.9926272676668725 1.069670871749596 1.0343532040361216 1.0023300752472577 1.0888380006374745 1.1757740390597866 0.9640369118226628 1.0510502507332005 1.2331940218861226 1.1458596623619854 1.0 13.83498508964882 -6.860976487104159 6.387997503249886 1.1008816243981172 1.0289119209924311 0.16554865779435735 0.07402756741472032 0.38369407792765203 21.152432414154813 0.013915674368143161 0.026539851447723944 1.377284033643792e-07 6.860976487104159 -0.07196970340568609 IRNS(ph)FVNNTQGDEENGFSDR ddPTM_A549_MK2206_60min_R1 2 IRNSFVNNTQGDEENGFSDR 20 1 Q13017-2;Q13017;A0A0A0MSK6 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 IRNS(1)FVNNTQGDEENGFSDR;IRNS(1)FVNNTQGDEENGFSDR 158.91 2.1823e-27 24035000.0 7486.5 8131.900000000001 7503.5 6451.3 10941.5 7898.8 6496.6 7963.4 11369.9 11317.8 11419.2 True False 8750.038172648181 8545.7789758468 8567.609129283905 8031.868789609866 9332.019844117405 8734.645773200908 7676.948126647508 9092.236336889686 8794.635803999374 8761.101119446519 8583.497486112961 1.019402427367709 0.995605694493744 0.9981489647017708 0.9357338081131191 1.0872048205542626 1.017609172406992 0.8943846187486932 1.059269412218015 1.0245981685470298 1.0206912897243692 1.0 13.067349901819673 IRPGEY(ph)EQFESTIGFK ddPTM_A549_MK2206_60min_R1 1 IRPGEYEQFESTIGFK 16 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 IRPGEY(0.999)EQFESTIGFK 65.704 0.0022916 994730.0 771.09 744.42 849.5 847.53 766.56 929.42 689.5 720.38 992.99 1152.4 1179.8 True False 901.2311406594918 782.3077983250989 969.9718738357661 1055.174888047067 653.8000394558915 1027.7706075009348 814.7732249674381 822.4960710712248 768.07935047919 892.0720396234407 886.8230991764814 1.016246804460089 0.8821463931775829 1.0937602716218129 1.1898369460909621 0.7372383963194249 1.1589353146702421 0.9187550772234621 0.9274635176226333 0.8661021022032931 1.0059188134046504 1.0 9.792502538501983 IRPGEY(ph)EQFESTIGFK ddPTM_A549_PD325901_60min_R1 2 IRPGEYEQFESTIGFK 16 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 IRPGEY(1)EQFESTIGFK;IRPGEY(1)EQFESTIGFK 85.16 7.0567e-05 4940700.0 2733.2 2637.6 2372.0 2369.94 3181.3 2996.2 2516.0 3090.7 2866.2 3012.1000000000004 3117.0 True False 3010.6724519245054 2859.8798086580036 2532.9781839947314 2516.325811275742 2957.856462889197 2971.7999405869446 2611.747756808026 3029.0535638927554 2745.74358147899 2821.915491951799 2733.6287602909765 1.101346494322089 1.0461844161873644 0.9265991859571717 0.9205075128811185 1.0820256597586984 1.0871263807857423 0.9554142079372998 1.1080705646257296 1.00443177265472 1.032296533071091 1.0 11.416601616101643 -5.521856544431421 24.99340973756832 1.0071762961718682 1.0875560053405764 0.15133300782641046 0.060104299238403186 38.86776670597189 950287.9675813483 0.007909353664389199 0.03147301635381925 3.0070694297206547e-06 5.521856544431421 0.08037970916870818 IRPHIAT(ph)LR ddPTM_A549_MK2206_60min_R1 1 IRPHIATLR 9 1 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 IRPHIAT(1)LR 44.299 0.023286 4143500.0 900.33 592.04 617.93 494.81 941.85 781.62 688.3 650.38 1214.3 1100.7 923.05 True False 1052.2836930448589 622.1723071927029 705.5617657437726 616.038472212865 803.3051126611505 864.3305096026352 813.3552005004888 742.5733567052151 939.2629888386389 852.0511055306505 693.8312101159948 1.5166277874253276 0.8967199775990013 1.0169069298941116 0.8878794485331318 1.157781750012159 1.245735990253503 1.1722666675148727 1.0702507265146974 1.3537341289124378 1.2280380200657224 1.0 9.438440927583878 -6.962713771340845 24.98674044949524 1.1695603090465232 1.057105618151843 0.057490804859466005 0.17809609198127155 378.4839975516359 253633.2543256491 0.02740281748382665 0.051786396112579756 1.0896480065142304e-07 6.962713771340845 -0.11245469089468019 IRPHIAT(ph)LR ddPTM_A549_PD325901_60min_R1 2 IRPHIATLR 9 1 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 IRPHIAT(1)LR;IRPHIAT(1)LR 64.55 0.0024643 11290200.0 2261.0 2504.4 2303.8 2561.1 2901.7 2741.3999999999996 2337.0 2435.1000000000004 2446.9 2951.9 2788.5 True False 2490.535055539774 2715.4545771925636 2460.149721874816 2719.293330319883 2697.8946023215603 2719.074947308274 2425.935813855469 2386.5300202010044 2344.0653023239615 2765.516530225593 2445.5321777579047 1.0184020795928062 1.1103736854863744 1.0059772446463218 1.111943386004827 1.103193254563931 1.1118540872364056 0.991986871372757 0.9758734895849973 0.9585092862989971 1.1308444662384505 1.0 11.255932732116912 -7.842124822092281 6.4784172398416136 0.979856029255151 1.0778788516552145 0.15695798632396307 0.05757524772124783 0.10016746763431188 6.503538279479613 0.005479411739956959 0.007611438729583636 1.4383851075579303e-08 7.842124822092281 0.09802282240006344 IRPLEVPTTAGPASAST(ph)PTDGAK ddPTM_A549_MK2206_60min_R1 2 IRPLEVPTTAGPASASTPTDGAK 23 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 IRPLEVPTTAGPAS(0.001)AS(0.165)T(0.833)PT(0.001)DGAK;IRPLEVPTTAGPASAS(0.034)T(0.966)PTDGAK 152.21 3.0903999999999997e-28 20892000.0 3532.4 4158.4 4287.9 3245.3999999999996 4649.6 3948.8 3277.2 3919.3999999999996 6109.2 5441.299999999999 6542.700000000001 True False 4128.582761111656 4370.044798037522 4895.988696669077 4040.52314569154 3965.649999287878 4366.659394998703 3872.624819236094 4474.986952659092 4725.4759543877235 4212.106550853025 4917.967020666185 0.8394897208058951 0.888587658207915 0.9955310143592361 0.8215840262272057 0.8063596162039113 0.8878992837180917 0.7874442433148953 0.9099261816629491 0.9608596264534555 0.8564731184965236 1.0 12.263846345077807 -8.714383942328094 2.6372906834775067 0.9833432316467957 0.863944184612421 0.13637318168156431 0.06536151431271013 0.1679046056452081 2.319283655069372 0.009749134305560996 0.010741898863546146 1.9302610960899795e-09 8.714383942328094 -0.11939904703437476 IRPLEVPTTAGPASAST(ph)PTDGAK ddPTM_A549_PD325901_60min_R1 2 IRPLEVPTTAGPASASTPTDGAK 23 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 IRPLEVPTTAGPAS(0.001)AS(0.126)T(0.872)PT(0.001)DGAK;IRPLEVPTTAGPASAS(0.006)T(0.993)PT(0.001)DGAK 198.59 4.677899999999999e-61 34698000.0 6290.799999999999 5833.6 6226.1 6639.8 6938.700000000001 6918.3 7262.2 6239.0 7508.6 7322.0 6994.5 True False 6929.437384957807 6325.217945020982 6648.640586580773 7049.925365920095 6451.3496492155045 6861.959658555057 7538.566995028322 6114.558250599184 7193.039653859865 6859.687670419664 6134.220841788651 1.1296361125037817 1.0311363265455307 1.0838606496342125 1.1492780497717519 1.0516983029476947 1.1186359010436617 1.2289363538516138 0.9967946065691802 1.1726085250889788 1.1182655217902908 1.0 12.582664391537325 -11.039550982267299 1.3234082759554053 0.9997338736800987 1.1122172405198465 0.0 0.07143053926513952 0.43944379485721813 1.3663962059706498 0.044231636264042154 0.009801990486508412 9.129542563813349e-12 11.039550982267299 0.1124833668397478 IRPVS(ph)LPVDR ddPTM_A549_MK2206_60min_R1 3 IRPVSLPVDR 10 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 IRPVS(1)LPVDR;IRPVS(1)LPVDR;IRPVS(1)LPVDR 113.69 2.8234e-05 17244300.0 2116.34 2768.2 2835.39 2743.04 3463.47 2369.23 2264.91 2558.7599999999998 3830.8999999999996 3392.2000000000003 3982.1 True False 2473.526452454719 2909.0895560618173 3237.4909374399003 3415.0849231397447 2953.9981510309644 2619.9403460324074 2676.4148295300915 2921.4720658738524 2963.207266690227 2625.8996640147816 2993.2346696310124 0.8263723782003501 0.9718882336814681 1.0816027791897114 1.1409345741544332 0.9868915995801676 0.8752873179687504 0.8941546938115693 0.9760250659645051 0.9899682429695741 0.8772782470605576 1.0 11.547489675239209 -4.285346849776597 15.953855044412432 0.9853776790708897 0.9857739919071982 0.0 0.09114101215570063 0.0 0.0 0.011209937195681292 0.0 5.183858641067768e-05 4.285346849776597 0.0003963128363084767 IRPVS(ph)LPVDR ddPTM_A549_PD325901_60min_R1 2 IRPVSLPVDR 10 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 IRPVS(1)LPVDR;IRPVS(1)LPVDR 124.33 6.2192e-06 24093000.0 2587.89 2574.61 3227.8 2691.79 3072.96 3432.1000000000004 2830.1000000000004 2948.8 3409.6 3063.35 3183.0 True False 2850.6106876960725 2791.5814202945826 3446.857918338192 2858.0557548013585 2857.125890736486 3404.1501155091273 2937.801004190142 2889.9838707111503 3266.3063692033925 2869.9295582054197 2791.511178699449 1.0211711525454674 1.0000251625698904 1.2347641466168393 1.0238381908013394 1.0235050866131965 1.219464977064897 1.0524052443733536 1.0352757648843016 1.1700853624111756 1.0280917304234136 1.0 11.446830618112196 IRQEDENFNSLLQNGDILNS(ph)STEEKFK ddPTM_A549_PD325901_60min_R1 1 IRQEDENFNSLLQNGDILNSSTEEKFK 27 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 IRQEDENFNSLLQNGDILNS(0.477)S(0.477)T(0.047)EEKFK 50.891000000000005 0.0018059999999999999 17419000.0 1102.5 1358.2 950.37 1061.9 1512.3 1201.1 1146.3 1198.2 1635.6 1374.7 1459.1 True False 1214.424988382397 1472.660280603315 1014.8678232390693 1127.4911512501203 1406.0812651517729 1191.3186398234363 1189.9230737794285 1174.3009610302838 1566.861419952213 1287.90120739223 1279.6399499969725 0.9490364757565363 1.1508395628057713 0.7930885740488723 0.8811003057952261 1.0988100716573435 0.9309795617323879 0.9298889689886938 0.9176807593675566 1.224454910114302 1.0064559233206787 1.0 10.321522223462152 -8.741026093869056 24.999741801319182 1.1059926132290034 0.9579659825065598 0.18490990525556372 0.10809286605140575 248.88783989482647 304807.7888501894 0.019958755372222525 0.022617983081586544 1.8154065837799932e-09 8.741026093869056 -0.1480266307224436 IRQEDENFNSLLQNGDILNSS(ph)TEEKFK ddPTM_A549_PD325901_60min_R1 1 IRQEDENFNSLLQNGDILNSSTEEKFK 27 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 IRQEDENFNSLLQNGDILNS(0.161)S(0.678)T(0.161)EEKFK 144.26 2.9446e-33 18849000.0 1100.5 1703.4 1418.6 1537.7 1368.0 1578.7 1433.6 1614.1 1699.5 1381.8 1881.0 True False 1212.2219498547197 1846.9514960828199 1514.8747267347912 1632.6802366299178 1271.9163993437965 1565.8435906163177 1488.1564324960211 1581.9055092630463 1628.0759251704483 1294.5529121805366 1649.6489246414274 0.7348363228971352 1.1196027642574184 0.9183012846591398 0.9897137580256975 0.7710224765674091 0.94919807919535 0.9021049329144328 0.9589346470230895 0.9869226723645649 0.7847444949305953 1.0 10.68794330999947 -8.562096904648559 2.489779777246232 0.9943094741038231 0.9192496725200017 0.0 0.11535295831730132 0.456979749253141 5.676742632204129 0.015587117044215799 0.018053980233897857 2.740962509438196e-09 8.562096904648559 -0.07505980158382142 IRS(ph)EDEEDLGNAR ddPTM_A549_MK2206_60min_R1 3 IRSEDEEDLGNAR 13 1 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 IRS(1)EDEEDLGNAR;IRS(1)EDEEDLGNAR;IRS(1)EDEEDLGNAR 90.444 0.00015354 10271400.0 2447.71 2650.84 2205.12 2141.24 3109.9700000000003 2196.44 2121.6099999999997 2495.79 3559.44 3123.4 3469.04 True False 2860.8236072360482 2785.7564333469077 2517.839174140937 2665.8438961239153 2652.497532752349 2428.8658229211287 2507.0790744353385 2849.5758755363163 2753.232523257683 2417.821770704491 2607.5816273666574 1.0971175656445833 1.0683295219257183 0.9655840291694533 1.0223434112841545 1.0172251195952209 0.9314630067301057 0.961457562104081 1.092804093122118 1.0558566966274094 0.9272276446993527 1.0 11.348496700035636 -5.5600208435207055 10.113997494076969 1.0167089489824201 1.0899777151197825 0.23716759066430837 0.05101311479351997 0.3692907433893546 98.15281167469351 0.006407204483846785 0.024980364835339292 2.7540965201127173e-06 5.5600208435207055 0.07326876613736233 IRS(ph)EDEEDLGNAR ddPTM_A549_PD325901_60min_R1 2 IRSEDEEDLGNAR 13 1 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 IRS(1)EDEEDLGNAR;IRS(1)EDEEDLGNAR 73.464 0.00034069 7944500.0 1293.02 1130.17 1500.63 1322.29 1372.58 1015.3499999999999 1168.02 1443.32 1597.58 2092.3999999999996 1781.33 True False 1424.2864385289856 1225.4133922319602 1602.4717758212537 1403.9648501615234 1276.1747159439396 1007.0813262382198 1212.469640265069 1414.5318503373637 1530.4392683341014 1960.2855069087825 1562.2377027812395 0.9116963673283135 0.7843962477991451 1.0257541300970945 0.8986883671172804 0.8168889495318004 0.6446402646955204 0.7761108556697351 0.9054523827066033 0.9796455850537165 1.2547933668601785 1.0 10.60939826857275 -8.608682382270436 3.2664159721024952 0.9907438145851071 0.8364013063915018 0.3834091181346111 0.1202944308176811 0.20435763023210576 4.3695231391128875 0.01652266435178221 0.018843687708228647 2.462167632079011e-09 8.608682382270436 -0.1543425081936053 IRS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 IRSPGK 6 1 Q9UHK0 Q9UHK0 NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 1 IRS(1)PGK;IRS(1)PGK 41.428999999999995 0.042145 89934000.0 7589.3 6081.1 3424.2 2942.1000000000004 6682.8 7154.299999999999 7525.200000000001 8479.2 6058.4 7628.7 7362.6 True False 8870.188299429485 6390.602015521832 3909.803049309511 3662.9146320758864 5699.76897265163 7911.363277360006 8892.43143223345 9681.152566460936 4686.182073276795 5905.371371637751 5534.263222577357 1.6027767279378802 1.1547340194176146 0.7064721882687539 0.6618612965738253 1.0299056520114698 1.4295242129223502 1.606795895785413 1.7493119096623553 0.8467580750693671 1.0670564687899982 1.0 12.434175548211682 IRS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 IRSPGK 6 1 Q9UHK0 Q9UHK0 NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 1 IRS(1)PGK;IRS(1)PGK 47.574 0.029675999999999998 122280000.0 12147.8 11129.900000000001 9266.099999999999 9690.3 11156.900000000001 8349.7 6572.200000000001 7718.1 9067.8 11314.5 12071.8 True False 13381.035713262288 12067.855733387456 9894.953267585819 10288.847822731941 10373.277833215505 8281.702811534213 6822.308667445834 7564.156440767682 8686.711900123915 10600.100539055356 10587.04512944518 1.2639065527402291 1.1398700568323619 0.9346284205463069 0.9718337550216086 0.9798085968638091 0.7822487493229586 0.6444015855256263 0.7144728626621134 0.8205039077394721 1.0012331495191105 1.0 13.370012365296667 -5.437745090420438 0.9661193134563862 0.8724254713036266 1.4173001032421988 0.5842386041993546 0.1119448823714462 1.0106182703286068 0.8591750232092046 0.019863051298754857 0.5341850568257724 3.649681024620207e-06 5.437745090420438 0.5448746319385722 IRS(ph)PGKNHK ddPTM_A549_MK2206_60min_R1 1 IRSPGKNHK 9 2 Q9UHK0 Q9UHK0 NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 1 IRS(1)PGKNHK 56.258 0.0032771999999999996 16568000.0 2672.5 3014.7 2354.4 2150.1 4926.7 3429.3 3212.5 3643.1 5285.5 4738.4 4964.7 True False 3123.552663648202 3168.1353531751915 2688.289322847475 2676.874596521656 4201.9889563600245 3792.186249814894 3796.1696667264578 4159.520581525833 4088.3426892091143 3667.992149038277 3731.8279712506173 0.8370033902182878 0.8489499991912757 0.7203679653932629 0.7173092160581498 1.125986778793516 1.0161739177232356 1.0172413348020108 1.1146067325637967 1.0955335349606217 0.9828942216243297 1.0 11.86566676743699 -6.760136796083093 24.999999999999652 1.0517240798569314 0.7814435245339384 0.8341397739692098 0.05779413754280323 10.451634457790005 200586.42841773282 0.008645226391074973 0.017249961168245585 1.7372535344119e-07 6.760136796083093 -0.270280555322993 IRS(ph)SPREAK ddPTM_A549_MK2206_60min_R1 1 IRSSPREAK 9 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 IRS(0.894)S(0.106)PREAK 53.568999999999996 0.0044336 5143800.0 1427.6 1621.8 1432.0 1766.1 1161.7 951.34 1182.2 1076.0 1471.3 2451.7 2346.3 True False 1668.5439785310273 1704.3426927321207 1635.0791328226223 2198.794579283241 990.815468894684 1052.0101673516172 1396.9904373553375 1228.5262951117982 1138.0528991833069 1897.8592672204002 1763.6489554142897 0.9460748826509401 0.9663729777402115 0.9271001056094716 1.2467302931987014 0.5617985744005028 0.5964963515681582 0.7921023245962105 0.6965821011830619 0.6452831192338799 1.076098087090457 1.0 10.784347713651252 -6.763880779870949 24.999988104254744 0.7815618384848027 1.0108791085924493 0.3435075464460733 0.1683453754772589 67.16405599244169 687772.4044528808 0.025926894031947187 0.05067367820500435 1.722341317747455e-07 6.763880779870949 0.2293172701076467 IRS(ph)SPREAK ddPTM_A549_PD325901_60min_R1 1 IRSSPREAK 9 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 IRS(0.5)S(0.5)PREAK 46.592 0.01188 17094000.0 3948.0 2538.7 2219.8 3463.2 4707.3 5166.3 3670.3 2478.8 5666.4 2419.7 2813.2 True False 4348.798053636011 2752.6451585684244 2370.4489767417813 3677.113998502136 4376.675487303403 5124.227365681303 3809.9752749652234 2429.3583894190183 5428.260913436792 2266.919729051413 2467.1942343441046 1.7626492446761592 1.1156986021816826 0.9607873363776555 1.4904031256702757 1.7739484903047886 2.076945258038657 1.5442542876961987 0.9846644239037203 2.200175745336028 0.9188249946012321 1.0 11.26865558355682 -6.505805388416649 22.854492115454217 1.5854225386342975 1.257024443636281 0.0233503306058086 0.4439616027320458 510.65069667129785 683555.9933328464 0.07056944031952152 0.160143300214668 3.120287502052628e-07 6.505805388416649 -0.32839809499801653 IRS(ph)SVEKENQK ddPTM_A549_MK2206_60min_R1 1 IRSSVEKENQK 11 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.5)S(0.5)VEKENQK 107.07 4.772e-05 276410000.0 6019.5 7497.4 6524.1 5589.4 8020.8 5854.2 5815.2 5931.5 7788.4 9427.0 8827.1 True False 7035.444437354663 7878.98563601542 7449.3154821564785 6958.8032509176965 6840.950945089513 6473.687558296543 6871.746566831969 6772.308289456905 6024.339835519108 7297.434152664154 6635.08745443356 1.0603393678938753 1.1874727635655635 1.1227154929478513 1.0487884747122405 1.031026492426772 0.9756747899337529 1.0356678211136876 1.020681089128924 0.9079518358863001 1.0998248633163101 1.0 12.6958997659691 -6.804437336934189 0.7988049403068366 0.962843657350046 1.139597291339282 0.28808209823133024 0.06024436251466558 0.3386265713542848 0.39117758169230243 0.008708457243564451 0.03321691576853389 1.568782236298225e-07 6.804437336934189 0.17675363398923605 IRSS(ph)PREAK ddPTM_A549_PD325901_60min_R1 2 IRSSPREAK 9 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 IRS(0.412)S(0.588)PREAK;IRS(0.235)S(0.765)PREAK 50.284 0.0093435 30281800.0 4995.6 3179.3 3078.1000000000004 3619.5 6152.0 6565.4 5234.2 3748.4 6300.8 3898.3 4514.7 True False 5502.749634433652 3447.2307687543184 3286.9983761189656 3843.0682945190783 5719.904743247836 6511.9335591514355 5433.39034526414 3673.6352214370877 6035.999287622221 3652.1606727119597 3959.420521041281 1.3897866127608223 0.87064022384966 0.8301715765352763 0.9706138244463097 1.4446317871140317 1.6446683358197258 1.3722690773535775 0.927821432938112 1.5244653240406059 0.9223977734376859 1.0 11.951073585524025 -6.742291048801476 24.82506704231847 1.27987128047069 0.9917461997191984 0.16601083728188115 0.2625567813282655 293.0812943576428 379966.18878754106 0.039298752529556946 0.08170305108720069 1.810126603217965e-07 6.742291048801476 -0.28812508075149157 IRSS(ph)VEK ddPTM_A549_MK2206_60min_R1 2 IRSSVEK 7 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.252)S(0.748)VEK;IRS(0.037)S(0.963)VEK 83.86200000000001 0.0039923 109758000.0 10797.2 11031.5 9354.8 9125.3 14469.6 12752.900000000001 10841.2 13366.5 15536.6 12756.5 13647.2 True False 12619.503393804436 11592.95623065384 10681.451307073368 11360.998909650278 12341.141007763215 14102.403413310101 12810.905709234214 15261.242308189467 12017.584906852017 9874.79779022598 10258.223596441163 1.2301840835466349 1.1301134276967533 1.0412574074500611 1.1075015866871625 1.203048548487934 1.3747412776421233 1.2488425104789722 1.4877080972853796 1.1715074051438321 0.962622592244119 1.0 13.324493302454329 -9.99780058878875 1.1177141740028516 1.0245518968946752 1.2186025944850012 0.3607979249622527 0.1198211311727506 0.41799241649292507 1.052306832339577 0.04289957446766128 0.02413923606801288 1.0050771768703002e-10 9.99780058878875 0.194050697590326 IRSS(ph)VEK ddPTM_A549_PD325901_60min_R1 2 IRSSVEK 7 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.002)S(0.998)VEK;IRS(0.098)S(0.902)VEK 105.2 0.0027549 144137000.0 13081.8 12161.7 13049.2 11758.1 14721.400000000001 11618.4 11645.099999999999 11634.6 12128.3 12803.2 12510.2 True False 14409.85470568783 13186.609140489865 13934.797183214192 12484.371132417404 13687.419650072936 11523.783602468236 12088.260652943223 11402.538775832865 11618.589728299356 11994.803766992221 10971.524708691752 1.31338670679675 1.2018939473420045 1.270087572438761 1.1378884397468623 1.2475403386030408 1.0503356560222645 1.1017849363604661 1.0392847920945445 1.0589767636484464 1.093266805249941 1.0 13.421476410014009 -6.543514878670022 0.34964335207274994 1.0079872566253245 1.363767343269083 0.7325827167916639 0.05178733390007012 0.7943215967871604 0.12366753814066933 0.01499573169539483 0.10600939111750078 2.860784350182099e-07 6.543514878670022 0.3557800866437586 IRSS(ph)VEKENQK ddPTM_A549_MK2206_60min_R1 2 IRSSVEKENQK 11 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.014)S(0.986)VEKENQK;IRS(0.026)S(0.974)VEKENQK 111.81 1.1995e-05 991360000.0 13600.099999999999 15850.199999999999 15672.400000000001 14286.7 20037.1 15327.0 14806.7 16578.2 21169.9 22259.3 21911.6 True False 15895.464389478722 16656.907478322035 17894.981984112626 17786.94214135433 17089.66913298587 16948.892966760814 17496.88572897079 18928.210618608195 16374.951451383606 17230.908670244753 16470.34499060466 0.9650960194547308 1.0113271754674111 1.086497094889065 1.0799374361314662 1.0376023782582877 1.0290551276508864 1.0623266081525136 1.1492297598748296 0.9942081638681236 1.0461777625225186 1.0 14.007583153862159 IRSS(ph)VEKENQK ddPTM_A549_PD325901_60min_R1 6 IRSSVEKENQK 11 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.084)S(0.916)VEKENQK;IRS(0.205)S(0.795)VEKENQK;IRS(0.203)S(0.797)VEKENQK;IRS(0.008)S(0.992)VEKENQK;IRS(0.147)S(0.853)VEKENQK;IRS(0.2)S(0.8)VEKENQK 139.94 1.1849000000000001e-09 2422970000.0 62151.6 62526.100000000006 64170.299999999996 63340.6 74659.7 66636.0 68236.0 68379.3 67628.40000000001 69385.5 72694.9 True False 68461.18467841027 67795.39388236696 68525.28244536127 67253.00500506011 69415.86023398246 66093.33850909535 70832.75832017204 67015.42121897689 64786.21353209612 65004.48768859647 63753.88815093881 1.0738354422608207 1.0633923020014058 1.0748408361091024 1.0548847600610187 1.0888098317962789 1.0366950224685565 1.1110343286432012 1.0511581828596293 1.016192351730976 1.019616051254738 1.0 15.96022570967818 -8.717819354108844 3.026606743776 1.0069575365556211 1.0709228189562094 0.6677071949755162 0.018406590248495107 0.08831096875060682 1.6220748272872263 0.0029330405990841595 0.003236965513524374 1.9150523302497214e-09 8.717819354108844 0.0639652824005883 IRT(ph)LPLAR ddPTM_A549_MK2206_60min_R1 2 IRTLPLAR 8 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 IRT(1)LPLAR;IRT(1)LPLAR 106.62 0.00074924 18036400.0 1013.81 1022.52 1101.38 1050.99 1299.8 932.03 959.48 910.11 1616.3899999999999 1425.45 1353.1 True False 1184.9163427252317 1074.5619004639582 1257.5722453269418 1308.4825971807338 1108.601141834648 1030.6567959685572 1133.8050962897125 1039.1208795949804 1250.2802458444266 1103.43985498198 1017.0879263398006 1.165008758868465 1.0565083633732528 1.2364439816452972 1.286498997082363 1.0899757170691982 1.013340901290203 1.114756224046374 1.0216627812449508 1.2292744938422546 1.0849011441448673 1.0 9.990228688942222 IRT(ph)LPLAR ddPTM_A549_PD325901_60min_R1 2 IRTLPLAR 8 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 IRT(1)LPLAR;IRT(1)LPLAR 114.89 0.00052153 16020100.0 1082.59 991.06 1168.19 1289.5900000000001 1234.48 1037.19 790.73 1232.65 1283.15 1640.04 1318.67 True False 1192.493739839364 1074.5801043253725 1247.4703982971357 1369.2450454286115 1147.7743835248023 1028.743468519248 820.8216628540591 1208.063828754782 1229.2236677743238 1536.487594509022 1156.481949737858 1.0311390853179065 0.9291801783581228 1.078676929268029 1.1839744197814597 0.99247064235198 0.8895456334207682 0.7097574355052548 1.044602407351551 1.0628991382467787 1.3285876142358302 1.0 10.175527033362606 -4.86572245364041 18.502095844493518 1.0072144614447451 8.343874007062288 0.0 0.1516022690013718 3170.748894716062 441567.89477298793 0.016200993592023046 10557.375962905067 1.362315024591932e-05 4.86572245364041 7.336659545617543 IRT(ph)PEK ddPTM_A549_MK2206_60min_R1 2 IRTPEK 6 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 IRT(1)PEK;IRT(1)PEK 61.961999999999996 0.02449 22812000.0 6179.4 5530.4 5261.5 4904.4 6419.0 5732.9 5080.8 5540.6 6789.0 8114.799999999999 7880.1 True False 7222.331648175001 5811.873737751711 6007.6598165825635 6105.978220166884 5474.773603197879 6339.551672808972 6003.915593059545 6325.99701737587 5251.302339805254 6281.661044026633 5923.25369030394 1.2193183047347076 0.981196153604808 1.0142499596829344 1.0308486753086492 0.9242848423257306 1.0702819774858692 1.0136178369141347 1.0679935974599906 0.8865570536682169 1.0605085266412593 1.0 12.532174162101017 -8.751053737460367 24.976888811629507 0.9464297175931461 1.0333284502382103 0.04069515440982885 0.08090111629090356 231.4451143201914 556612.0415262668 0.012686901021552094 0.014307823851762025 1.7739699650025574e-09 8.751053737460367 0.0868987326450642 IRT(ph)PEK ddPTM_A549_PD325901_60min_R1 2 IRTPEK 6 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 IRT(1)PEK;IRT(1)PEK 60.118 0.02544 39122000.0 5013.6 4461.1 4163.8 4631.8 5645.9 4466.8 4537.700000000001 4646.4 5351.9 5193.5 5452.5 True False 5522.576981182753 4837.052553231815 4446.380506963433 4917.895766418972 5249.35146129762 4430.423861762821 4710.38465662472 4553.723906969716 5126.978254733586 4865.581523671746 4781.877066245281 1.1548973143132406 1.011538457852882 0.9298399865504533 1.028444625047731 1.0977596012143822 0.9265030866302842 0.9850492999652339 0.9522879496660273 1.0721685613635563 1.0175045188880587 1.0 12.223361326004387 -13.27914776477998 0.0013109199084903073 0.484373848765082 1.5522814822456605 5.3924530214466415e-05 0.06742858900989161 7791650.904529788 1071.1969739603842 442557.03294375894 430145.76527546154 5.258383242041347e-14 13.27914776477998 1.0679076334805786 IRT(ph)PSGEFLER ddPTM_A549_MK2206_60min_R1 2 IRTPSGEFLER 11 1 B3KT28;Q9UNN5;B1ANM7;Q9UNN5-2 B3KT28 FAF1 FAS-associated factor 1 1 IRT(0.5)PS(0.5)GEFLER;IRT(0.584)PS(0.416)GEFLER 92.575 0.00011599999999999999 18241300.0 1923.32 2519.9 2418.7 2306.0 3025.2 2537.5 2574.7 2280.8 3457.5 3247.8 3576.9 True False 2247.929395340639 2648.152146636869 2761.7080297193265 2870.9701035202725 2580.197087458208 2806.016565743824 3042.4896625433817 2604.1103846570545 2674.381770492954 2514.1197243049382 2688.6570125820954 0.8360788991756906 0.9849349077417923 1.0271700766573701 1.067808236634501 0.9596601855066198 1.0436498789590942 1.131602003641765 0.968554327484172 0.994690567810495 0.9350838401996329 1.0 11.392670009449805 -5.269878305595126 3.3749700629134396 1.0111293077032157 0.8148220484986402 0.4902787784035354 0.051968050918702074 0.17576544935730187 3.33110811978564 0.0063606950407767236 0.0877047421937983 5.37182300060449e-06 5.269878305595126 -0.1963072592045756 IRT(ph)PSGEFLER ddPTM_A549_PD325901_60min_R1 1 IRTPSGEFLER 11 1 B3KT28;Q9UNN5;B1ANM7;Q9UNN5-2 B3KT28 FAF1 FAS-associated factor 1 1 IRT(0.577)PS(0.423)GEFLER 41.621 0.034476 19211000.0 553.6 415.71 596.29 460.74 540.86 398.37 587.52 588.86 547.88 525.91 584.09 True False 609.8010644612198 450.7433406343717 636.7578251830599 489.1988633835392 502.87185946570617 395.12580679915243 609.8783951032802 577.1147253482669 524.8545089040222 492.7039528476377 512.2506328515741 1.1904349655296789 0.8799273475275056 1.2430591283770305 0.9549990415049147 0.9816910457803466 0.7713525010200253 1.190585928041194 1.126625695190673 1.0246049008905764 0.9618415698285724 1.0 9.00070605136608 -5.216797690988124 21.448127677043644 1.0180613197845532 1.1904388008252869 0.13507556437508395 0.12825775334877684 6722.362849627672 3229299.904189821 0.015884801687348838 7.503483838674827 6.070190336683304e-06 5.216797690988124 0.1723774810407337 IRTLTEPS(ph)VDFNHSDDFTPISTVQK ddPTM_A549_MK2206_60min_R1 1 IRTLTEPSVDFNHSDDFTPISTVQK 25 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 IRT(0.302)LT(0.302)EPS(0.378)VDFNHS(0.011)DDFT(0.006)PIS(0.001)TVQK 43.801 0.019959 2750000.0 523.4 721.6 671.73 908.87 786.32 610.62 574.25 462.26 1012.3 912.5 1259.7 True False 611.7371240985848 758.3263577971998 766.9914147283099 1131.5431908007247 670.6533696318057 675.2354031032488 678.5837917876016 527.7867706118775 783.0156663109229 706.3656162412261 946.8817240486641 0.6460544211191737 0.800867033904465 0.8100181841601276 1.1950206261902359 0.708275756727287 0.7131148336204932 0.7166510605845493 0.5573946113936743 0.8269413659848827 0.7459913929069806 1.0 9.887040418229557 -10.021664562562346 1.055619479433795 0.9775583655426366 0.7809160758101398 0.0 0.16836118831230185 0.538448427809367 1.2093513558022917 0.0558508609362969 0.030010730794404826 9.513392989837305e-11 10.021664562562346 -0.19664228973249687 IRTS(ph)PTFR ddPTM_A549_MK2206_60min_R1 6 IRTSPTFR 8 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 1 IRT(0.026)S(0.974)PTFR;IRT(0.061)S(0.938)PT(0.001)FR;IRT(0.141)S(0.858)PT(0.001)FR;IRT(0.214)S(0.785)PT(0.001)FR;IRT(0.271)S(0.727)PT(0.002)FR;IRT(0.039)S(0.961)PTFR 101.82 0.00063187 765585000.0 17064.03 19035.21 18930.3 17897.72 24190.5 18140.81 18298.56 17934.649999999998 27185.899999999998 25882.3 28432.1 True False 19944.021088521175 20004.020883044384 21614.901192787765 22282.662203459175 20632.10949496158 20060.458473304905 21623.17149160283 20476.941560062103 21028.337056961507 20035.470453961974 21371.62488395968 0.933200970764278 0.9360084219922022 1.0113831451819404 1.0426283600075381 0.9653973250506966 0.9386491940704582 1.01177012084991 0.958136860030279 0.983937214467215 0.9374799793065548 1.0 14.383408979775213 -6.516167650169269 0.003995265915439058 1.9487391356231731 4.774314565449188e-08 0.0 0.03770578691733723 39281.07886714918 35.88915228565154 8584.469861379077 8922.442364028415 3.046718641508474e-07 6.516167650169269 -1.9487390878800275 IRTS(ph)PTFR ddPTM_A549_PD325901_60min_R1 5 IRTSPTFR 8 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 1 IRT(0.02)S(0.98)PTFR;IRT(0.229)S(0.771)PTFR;IRT(0.196)S(0.798)PT(0.007)FR;IRT(0.097)S(0.902)PT(0.001)FR;IRT(0.114)S(0.886)PTFR 97.81299999999999 0.00068326 1236204100.0 16238.890000000001 16951.18 18111.0 16545.71 19463.899999999998 17519.88 17731.75 18197.100000000002 18237.319999999996 18314.86 21085.3 True False 17887.45015836101 18379.715428771375 19340.121370290286 17567.700928666203 18096.822810809732 17377.20390597769 18406.541449435917 17834.14456515122 17470.86886238866 17158.45661396643 18491.941770729325 0.9673105388356156 0.9939310677402418 1.0458675248969005 0.9500192649575562 0.9786329113070742 0.9397176414152385 0.995381754801511 0.9644278997990722 0.9447828183216048 0.9278883108493424 1.0 14.174609104341052 -6.296570807620784 24.9997005366594 0.9708712395450595 1.0015259127764482 0.25052483778017476 0.028089232146909192 715.0607549353406 508839.81455682166 0.0039064440380287705 0.009077919404779351 5.051602766051552e-07 6.296570807620784 0.030654673231388707 IRVDVADQAQDKDRDDR ddPTM_A549_MK2206_60min_R1 2 IRVDVADQAQDKDRDDR 17 3 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 50.07899999999999 0.0056167000000000005 3953700.0 734.24 976.18 1033.11 1139.98 1142.29 975.5999999999999 965.1099999999999 775.21 1766.26 1433.56 1557.3899999999999 False True 858.1617615554933 1025.8633923981026 1179.6205327586442 1419.2751511756462 974.2606541824133 1078.837344449132 1140.457994413812 885.0983914810571 1366.2049301376392 1109.7178003493405 1170.6470812226307 0.7330661608614135 0.8763216590662702 1.0076653772771906 1.2123851619681543 0.832241133822236 0.9215735141306531 0.9742116242435004 0.756076195531667 1.1670510711996707 0.9479524770098471 1.0 10.193090492089246 -8.78193143571083 24.999593829423606 1.0788852187321638 0.9255006465812065 0.12183235493931055 0.1346487438391021 274.26330168206823 334590.2428306688 0.023598459822401326 0.025136558006324073 1.65222262246817e-09 8.78193143571083 -0.15338457215095735 IS(ph)APNVDFNLEGPK ddPTM_A549_MK2206_60min_R1 4 ISAPNVDFNLEGPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK 268.7 1.0769999999999999e-83 341501400.0 28546.539999999997 35483.53 34730.93 29385.43 47689.63 37633.549999999996 32966.64 35534.69 47117.98 44296.29 48232.81 True False 33364.49805610473 37289.49011458935 39656.29811908043 36584.86166916207 40674.54860107087 41615.90728187129 38956.25176089999 40571.84112792407 36445.83276195274 34289.72732389049 36255.27211916458 0.920266104925143 1.028526002839683 1.0938077637022632 1.0090908033710018 1.1218933474662918 1.1478580865449652 1.0744989482593807 1.119060449872551 1.0052560808856108 0.9457859593823017 1.0 15.145903181770073 -8.867419847671624 10.37737238750771 1.00233288280313 1.0673330463232784 0.2351020856182563 0.0622464291129345 0.4023985293802295 36.73959827716077 0.010467885225663994 0.011135193802167024 1.3570009519703933e-09 8.867419847671624 0.06500016352014848 IS(ph)APNVDFNLEGPK ddPTM_A549_PD325901_60min_R1 8 ISAPNVDFNLEGPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK 176.04 7.0744e-23 584666840.0 19344.180000000004 19319.429999999997 20911.65 21164.5 22770.899999999998 20242.22 20148.29 20782.65 19511.31 20859.24 21521.49 True False 21307.98691316734 20947.546167645472 22330.840320966865 22471.783096933028 21171.550539340402 20077.37407160665 20915.04420151733 20368.123742076474 18691.31749310822 19542.18402653983 18874.483165965572 1.1289308812222132 1.1098341598787744 1.1831232741373172 1.190590645547005 1.1217022661323461 1.0637310645840692 1.1081121542565622 1.0791354424371329 0.9902955926662069 1.035375848689635 1.0 14.204149519663613 -8.188992961705633 0.858509882680784 0.9928083726133473 1.1474366854068465 0.7127180413758897 0.0338316659802041 0.1726066631523832 0.2530808905292811 0.007046615691937639 0.009834071346529054 6.471531036026199e-09 8.188992961705633 0.1546283127934992 IS(ph)ASS(ph)ATR ddPTM_A549_PD325901_60min_R1 1 ISASSATR 8 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;A0A1B0GV30;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 IS(0.998)AS(0.262)S(0.637)AT(0.102)R 47.977 0.041958999999999996 30639000.0 1667.0 2401.4 1663.8 2084.0 2094.9 2227.8 1965.5 2005.0 2224.5 1921.4 1964.9 True False 1836.2326128194618 2603.7744057140326 1776.715473242173 2212.723946892598 1947.76145101266 2209.657535424736 2040.2981780628684 1965.008702107929 2131.012000907128 1800.0824760918258 1723.229756527346 1.0655761983357572 1.5109850534157216 1.0310380647224962 1.284056254548251 1.1302970156096832 1.282276798584096 1.1839966030847093 1.1403056932279396 1.2366383489114912 1.0445980689884056 1.0 10.75089935215904 -10.991027709097857 0.5777398441192465 0.9449781349378031 1.216978688806934 0.24477230210798173 0.12392338472211045 1.4024224235271612 0.5592026749709388 0.21346554271310353 0.02346900039518915 1.0208743472373985e-11 10.991027709097857 0.2720005538691309 IS(ph)ASSATR ddPTM_A549_MK2206_60min_R1 2 ISASSATR 8 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;A0A1B0GV30;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 IS(0.99)AS(0.01)SATR;IS(0.967)AS(0.027)S(0.005)AT(0.001)R 126.31 0.0010787000000000001 780400000.0 6791.400000000001 7871.9 8294.5 7100.1 9272.5 7657.5 6801.900000000001 7295.2 10953.7 10353.9 10762.7 True False 7937.622286211561 8272.546086396582 9470.784823461756 8839.624818735603 7908.527533206476 8467.811567362882 8037.717184780293 8329.316940613005 8472.704439464549 8014.946798904148 8090.024554591217 0.981161705091097 1.0225613075181312 1.1706744225006012 1.0926573533969037 0.9775653312100594 1.0466978820919974 0.993534337323953 1.0295786971234824 1.047302685213255 0.9907197122603959 1.0 12.981928366147157 -6.7458596158101445 24.97563113223259 1.020449766018646 1.0710285785801046 0.21165600833596343 0.04878636322480589 315.38249918386254 505581.024678587 0.006975559866586643 0.01447774609317049 1.7953138620472042e-07 6.7458596158101445 0.050578812561458575 IS(ph)ASSATR ddPTM_A549_PD325901_60min_R1 1 ISASSATR 8 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;A0A1B0GV30;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 IS(0.946)AS(0.042)S(0.012)ATR 133.83 0.0010788 490640000.0 7347.1 7198.6 7105.6 7382.6 8413.4 7883.8 7378.2 8046.8 7918.6 7734.4 8543.1 True False 8092.972183350844 7805.251285488902 7587.828745443917 7838.606434898899 7822.471808654318 7819.596946665564 7658.981438505963 7886.300261407516 7585.808779673271 7246.048664039037 7492.352859172876 1.0801643135964465 1.0417623718740028 1.012743111285015 1.0462142643618426 1.0440607851347095 1.043677078968864 1.0222398200491962 1.0525799317836892 1.012473507622639 0.9671259216212316 1.0 12.871203130878275 -8.887585014471746 4.68182662324697 1.0053420074711945 1.0413224561832886 0.5325316966518444 0.019908291860110925 0.12635379225769017 4.531793933624841 0.0028359798587801782 0.0029923059904395284 1.2954330877104855e-09 8.887585014471746 0.03598044871209405 IS(ph)DAELEAELEK ddPTM_A549_MK2206_60min_R1 2 ISDAELEAELEK 12 0 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 IS(1)DAELEAELEK;IS(1)DAELEAELEK 266.89 9.3831e-77 62055000.0 10737.5 11221.3 8863.6 8107.2 15129.0 12844.9 11304.3 13452.1 13719.2 11962.7 12704.5 True False 12549.727493329301 11792.4162399525 10120.591760954321 10093.464363946041 12903.544141265113 14204.138792245441 13358.144984770712 15358.976370328463 10611.823105060577 9260.317761544024 9549.622023637568 1.3141596036226109 1.234856857241416 1.0597897734489876 1.0569490958869716 1.351209933683846 1.487403245603527 1.3988140003558414 1.6083334327066947 1.1112296464502796 0.9697051609605649 1.0 13.221227916719881 -8.976332143425198 21.100039125560194 1.0490705292635003 1.3075981540720467 0.40118870247573835 0.15703762385910014 24.94795800007161 22242.20770452085 0.030243808980390495 0.03126227860207588 1.05600957632471e-09 8.976332143425198 0.2585276248085464 IS(ph)DAELEAELEK ddPTM_A549_PD325901_60min_R1 2 ISDAELEAELEK 12 0 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 IS(1)DAELEAELEK;IS(1)DAELEAELEK 197.19 1.8001e-24 121829000.0 4933.3 5247.7 4547.5 4711.9 5215.0 3660.1 4018.3 3839.6 3985.1 4158.5 5094.8 True False 5434.124984296491 5689.942095804753 4856.120696338972 5002.943361498675 4848.7163907733175 3630.2933591022875 4171.218605398133 3763.0161658920683 3817.620105558553 3895.9316003059525 4468.1718985981615 1.2161853007493704 1.2734384945194046 1.0868249491167798 1.119684621593966 1.0851678272034582 0.8124784456572163 0.9335403158295691 0.8421824968445534 0.8544031411943412 0.8719296590912845 1.0 12.125468974620421 -6.7420007031490305 1.3384750203763862 0.9155617864972637 1.2106360486511172 0.781199446065922 0.07078150992178477 0.1791523115070663 0.6372311624418994 0.012479124030266993 0.03465921120815512 1.811337159952824e-07 6.7420007031490305 0.29507426215385346 IS(ph)DAHLADTMIGK ddPTM_A549_MK2206_60min_R1 6 ISDAHLADTMIGK 13 0 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK 106.14 2.9524e-05 20003000.0 4059.4699999999993 3876.8 3827.95 3947.6199999999994 5592.64 4134.13 3780.61 4237.37 7132.49 5521.03 5825.53 True False 4744.609291487355 4074.1125608483703 4370.810870452762 4914.787077215393 4769.970064525409 4571.600892586603 4467.497899991505 4838.03017390138 5516.9924032460685 4273.825488478135 4378.890124551254 1.0835186900181881 0.930398444575241 0.9981549539109936 1.1223819135491684 1.0893102884179429 1.044009043970953 1.0202352132435226 1.1048530646557793 1.2599065622390893 0.9760065603190065 1.0 12.096349534691573 -6.635909027891764 0.7497900997011219 1.1159655079142128 0.9952389290334561 0.0 0.0871457212975543 1.2838832268938778 1.2151811980016367 0.018478060007492057 0.08838533198521893 2.3125491514742531e-07 6.635909027891764 -0.12072657888075666 IS(ph)DAHLADTMIGK ddPTM_A549_PD325901_60min_R1 5 ISDAHLADTMIGK 13 0 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(0.999)DAHLADT(0.001)MIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK 150.05 2.584e-13 40445000.0 4454.179999999999 4277.5 4864.1 4178.89 5464.139999999999 4582.5599999999995 4350.01 4914.9800000000005 5234.410000000001 4867.0 5297.320000000001 True False 4906.365074605987 4637.979936887554 5194.207076209433 4437.010544352214 5080.357656659658 4545.241150702925 4515.552010966807 4816.9468681727785 5014.425950851105 4559.696789392586 4645.783222478215 1.0560899722714072 0.9983203509038249 1.1180476633256835 0.9550618984726036 1.093541694343118 0.9783584237661314 0.9719678673595238 1.0368427964667837 1.079349963336482 0.9814699849383614 1.0 12.181706122590118 -11.28409653183185 1.8303141512901295 0.9998959156150393 1.0384516334212226 0.07075142184767769 0.05077990503183817 0.8187513321259128 4.951535263901471 0.036857963428224415 0.007337953298308693 5.19880428434025e-12 11.28409653183185 0.038555717806183276 IS(ph)DSES(ph)EDPPR ddPTM_A549_MK2206_60min_R1 1 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 IS(0.988)DS(0.33)ES(0.682)EDPPR 106.67 0.00017601 5130200.0 792.47 767.53 772.76 861.35 594.91 754.74 814.25 733.19 1311.8 1092.1 1215.4 True False 926.2195619686771 806.5939986143084 882.3489879050348 1072.3807886674715 507.39952707251143 834.6060858441354 962.1886851772828 837.121927800204 1014.6793945141452 845.3938515036093 913.5826366664652 1.0138322739454881 0.8828911214397164 0.9658119063258497 1.1738191441339543 0.555395326824447 0.9135529204993386 1.0532037787935355 0.9163067403018346 1.1106596752063589 0.9253611195899397 1.0 9.835391421218443 -8.197307777000022 1.6743428138202772 1.0482966564730873 0.9198369249386384 0.016896578707167542 0.15135800519137696 0.5631503192906108 3.087292447744217 0.02537014935181227 0.033565628352691675 6.348808432949284e-09 8.197307777000022 -0.1284597315344489 IS(ph)DSES(ph)EDPPR ddPTM_A549_PD325901_60min_R1 2 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 IS(0.987)DS(0.138)ES(0.875)EDPPR;IS(0.795)DS(0.444)ES(0.761)EDPPR 140.91 3.7868e-11 19409400.0 4405.8 4418.0 3808.5 4777.0 4954.799999999999 3548.3999999999996 3091.6000000000004 3182.0 3748.2 4017.0 4574.9 True False 4853.073572621466 4790.32036497235 4066.967712370967 5072.064440645849 4606.791941132051 3519.5030068682686 3209.2525297884335 3118.532513769289 3590.676188716608 3763.3659344544926 4012.21630268052 1.2095742618310927 1.1939337272948087 1.0136461759685957 1.2641552842645236 1.148191322101528 0.8771967265366339 0.7998702681219767 0.7772593196647523 0.894935845387427 0.9379768313937179 1.0 11.970183669872565 -7.244570888559429 12.13099705031471 0.9176860971424503 1.1644937002269191 0.7300094450511817 0.0846363667421442 0.6020962791409238 430.9669465888079 0.01436287158078156 0.024611763281766615 5.694152726293852e-08 7.244570888559429 0.2468076030844688 IS(ph)DSESEDPPR ddPTM_A549_MK2206_60min_R1 2 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.949)DS(0.046)ES(0.005)EDPPR;IS(1)DSESEDPPR 102.52 0.00022894 11151000.0 531.4100000000001 843.3399999999999 557.5799999999999 738.71 1020.89 763.1 517.71 626.8 740.25 877.5999999999999 961.49 True False 621.0990162728871 886.2624038036176 636.6532282676242 919.6939831619522 870.7184333648056 843.8507354952156 611.7712056532154 715.6508194944942 572.5845569363438 679.3495504803288 722.7254972259666 0.859384397889445 1.2262780366893846 0.8809060019485778 1.2725356815167153 1.204770603371376 1.1675950810289155 0.8464779615516175 0.9902111136819898 0.7922573081122668 0.9399828193247265 1.0 9.497303982194005 -7.76151785700822 24.999999979509976 0.9036570382994561 1.1099499967427318 0.32204525026771325 0.13527649349226056 1.8307023990563789 583201.6606528106 0.02117543244670205 0.030292502656194327 1.7317378249355783e-08 7.76151785700822 0.20629295844327566 IS(ph)DSESEDPPR ddPTM_A549_PD325901_60min_R1 2 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.979)DS(0.02)ES(0.001)EDPPR;IS(0.999)DS(0.001)ESEDPPR 100.69 0.00026268 13909400.0 1271.2 1038.27 1289.8899999999999 1074.6 1058.44 747.78 1206.1399999999999 1136.63 1374.83 1425.51 1282.67 True False 1400.2512881920202 1125.7686567088817 1377.4296921386856 1140.9756014063273 984.0988258197721 741.6903276056686 1252.0403177251333 1113.9590229810146 1317.0506762001107 1335.5030553209413 1124.909721515056 1.2447677012748433 1.0007635592238184 1.2244802100950196 1.0142819282152113 0.8748247143729576 0.6593332010738977 1.1130140435081801 0.990265264558926 1.1708056664549709 1.1872090975640721 1.0 10.135593508727776 -6.287193018362927 23.909366614951285 1.0297695780948752 1.1410798199529784 0.1523957766836731 0.15163388712167924 825.1019621981036 766013.4024360442 0.022454427923220815 0.05220055719549448 5.161869035543393e-07 6.287193018362927 0.11131024185810312 IS(ph)EDETER ddPTM_A549_PD325901_60min_R1 1 ISEDETER 8 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 IS(1)EDETER 121.5 0.0011790999999999998 4974200.0 1220.0 799.01 1137.0 972.82 1027.3 953.18 1152.6 1182.5 1108.0 1059.4 759.05 True False 1343.8535018834684 866.3453768258385 1214.1636573364294 1032.9088819654796 955.1459919926042 945.4176181058223 1196.4628237269212 1158.914109846696 1061.4346131737914 992.5093032016656 665.6916620143941 2.0187326634330156 1.3014214031226754 1.8239129714534053 1.551632596448452 1.4348174184761704 1.4202034846658178 1.79732283277577 1.7409172684239465 1.5944838635380718 1.4909444714964821 1.0 9.378710287960475 -10.501482396858417 0.7219436173454353 0.9775222999588593 1.623702655732492 0.17864643353516174 0.24300141152101548 0.4037230732697639 0.3614533246823197 0.1486156036850269 0.0376386865441581 3.151502116604528e-11 10.501482396858417 0.6461803557736328 IS(ph)EDETERNGDDGTHDK ddPTM_A549_MK2206_60min_R1 2 ISEDETERNGDDGTHDK 17 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 IS(0.945)EDET(0.055)ERNGDDGTHDK;IS(0.759)EDET(0.241)ERNGDDGTHDK 88.755 1.9574e-06 24075000.0 2075.88 1884.17 2035.15 1705.84 3606.5 2669.2 1686.69 1980.69 3232.0 3337.6 3074.6000000000004 True False 2426.237793606745 1980.0662050592446 2323.7648723212005 2123.770876578067 3075.9886275016606 2951.6529723284384 1993.139740131004 2261.4588731087256 2499.9571604434514 2583.6338419361305 2311.0919653568494 1.0498231268923632 0.8567665132934283 1.005483514786221 0.9189469343553974 1.3309676436985516 1.2771681164460635 0.8624233782160411 0.9785239648650416 1.0817211941011788 1.11792775045938 1.0 11.17435895482003 IS(ph)EDETERNGDDGTHDK ddPTM_A549_PD325901_60min_R1 2 ISEDETERNGDDGTHDK 17 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 IS(0.983)EDET(0.017)ERNGDDGTHDK;IS(0.988)EDET(0.012)ERNGDDGTHDK 96.71799999999999 6.0248e-07 29422000.0 2819.7 2735.0 2426.7 2803.6000000000004 2877.1 2545.3999999999996 2598.6000000000004 2144.8 2637.4 2960.4 3079.1 True False 3105.9538682465713 2965.488048483335 2591.3904549325534 2976.772004562424 2675.0224214561676 2524.671106324679 2697.4911450084824 2102.02028143695 2526.559249805557 2773.4798387749756 2700.3902200230805 1.1501870526771587 1.0981701927723575 0.9596355503429443 1.1023488318428962 0.9906058767437337 0.9349282513336536 0.9989264236727338 0.7784135292191156 0.9356274626798057 1.027066317382556 1.0 11.398952183721267 -6.924189853792553 4.528908760103734 0.9534724316847184 1.0702015205786024 0.4001150778982019 0.07478200685094236 0.18549166123564953 7.231840912034278 0.010796085100398473 0.020786880052676933 1.1907213650170012e-07 6.924189853792553 0.116729088893884 IS(ph)EDVEER ddPTM_A549_MK2206_60min_R1 1 ISEDVEER 8 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 IS(1)EDVEER 45.997 0.044141 868210.0 102.04 0.0 0.0 0.0 153.45 0.0 176.84 0.0 263.25 191.24 96.55 True False 119.2618573615201 0.0 0.0 0.0 130.87770827398586 0.0 208.96953894596328 0.0 203.62429532386702 148.0387511780517 72.57397035555965 1.643314493849844 0.0 0.0 0.0 1.8033698257485475 0.0 2.8794006710968763 0.0 2.805748318939368 2.039832607376578 1.0 6.181380293624033 -7.466105101867554 1.1970572007320481 1.7755501742392987 0.4405285088093268 0.19206919787640642 1.0070830484512112 0.5026266022407456 1.434452360483607 0.1743303721205477 0.3307640208715425 3.418966914525052e-08 7.466105101867554 -1.3350216654299718 IS(ph)EDVEER ddPTM_A549_PD325901_60min_R1 1 ISEDVEER 8 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 IS(1)EDVEER 71.34899999999999 0.0061679 1025400.0 182.95 179.99 196.33 116.73 222.81 232.48 120.27 0.0 200.85 250.78 241.97 True False 201.52294931932835 195.15838897496 209.65413442819795 123.94014698693529 207.16059425277146 230.5867599584983 124.84694066426924 0.0 192.40897297468948 234.94570800161745 212.20922397420836 0.9496427419376511 0.9196508300632554 0.9879595735842239 0.5840469356883319 0.9762091881451369 1.08660102346222 0.5883200471975855 0.0 0.9066946731687526 1.107141827304229 1.0 7.729343556171754 -8.98205857732039 24.999281228742127 0.9588362298471481 0.7602117783558856 0.11890911239489754 0.2905403356454178 223.36420774281484 311236.78461984295 0.05323523247335106 0.053971581113606386 1.0421768518655372e-09 8.98205857732039 -0.1986244514912625 IS(ph)ESLVR ddPTM_A549_MK2206_60min_R1 1 ISESLVR 7 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 IS(0.996)ES(0.004)LVR 66.27 0.024399 1103500.0 180.06 207.73 247.41 212.73 437.8 258.03 403.81 457.95 502.17 611.69 544.76 True False 210.4497259556576 218.30256971343175 282.4964582762884 264.8488595498126 373.4001999501533 285.33456333354815 477.1770499986962 522.8658149130559 388.4292968007076 473.50880416284457 409.4810573888627 0.5139425186054566 0.5331200693518803 0.6898889537838043 0.6467914809995703 0.911886382073969 0.6968199338768944 1.1653214266894552 1.2768986635113566 0.9485891710781548 1.1563631470092108 1.0 8.677652904050664 -6.794003360656518 0.9767889741419874 1.007255797263393 0.5375845120760622 0.7011780098439013 0.13908019225582818 0.2632113665766159 0.4774050871536495 0.022267250161082615 0.07311958260059312 1.6069288182320397e-07 6.794003360656518 -0.4696712851873309 down IS(ph)ESLVR ddPTM_A549_PD325901_60min_R1 2 ISESLVR 7 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 IS(0.763)ES(0.237)LVR;IS(0.845)ES(0.155)LVR 86.13600000000001 0.013238 2174900.0 487.38 695.76 550.39 516.25 651.59 474.62 632.05 557.01 905.89 1025.8 866.29 True False 536.8584588098072 754.3941369699322 587.7427751639374 548.1375900111826 605.8245662634683 470.7548520797592 656.1030086210313 545.8999985841085 867.8185936173335 961.0308129358767 759.7418218647643 0.7066327578125206 0.9929611813632868 0.773608557866855 0.7214787632274801 0.797408473284371 0.6196247705889153 0.8635867998034457 0.7185335634731977 1.1422546036590402 1.2649439392148432 1.0 9.569365429915647 -8.759600464762409 24.999992336711138 1.067175792449992 0.7783390912054304 0.6590888245048199 0.11286331375667805 21.91824261158724 297977.6178159843 0.016955990257699394 0.018750959130677473 1.7394002783514148e-09 8.759600464762409 -0.2888367012445616 IS(ph)FVEEDVHPK ddPTM_A549_MK2206_60min_R1 2 ISFVEEDVHPK 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 IS(1)FVEEDVHPK;IS(1)FVEEDVHPK 114.82 6.796e-06 39984000.0 997.26 934.4100000000001 845.92 860.95 1334.65 1111.79 1099.94 780.53 1408.43 1184.19 1020.11 True False 1165.5731073338836 981.9674778121973 965.8841760037099 1071.8827886495137 1138.3247530001638 1229.4388798535267 1299.7848601460234 891.1725177728734 1089.4228538005473 916.6806565443272 766.7885333962712 1.5200711233530186 1.2806235813971452 1.2596486957435336 1.3978857820185633 1.4845354402448858 1.6033610654140558 1.6951021090378033 1.1622141946041875 1.42076049178156 1.1954803920764852 1.0 9.582684952790144 -10.602471700777025 0.6252826453921977 0.9580447390345183 1.4314777772433736 0.38106518984349047 0.15547600634309436 0.6341628509121822 0.3833995464747791 0.16374917715722032 0.032207064477907825 2.497631132915573e-11 10.602471700777025 0.4734330382088553 IS(ph)FVEEDVHPK ddPTM_A549_PD325901_60min_R1 4 ISFVEEDVHPK 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK 113.65 7.5562e-06 58351000.0 1657.1999999999998 1796.99 1626.56 1748.99 2167.42 2200.8500000000004 1941.8700000000001 1755.82 1998.34 1890.2 2417.1699999999996 True False 1825.4377240338392 1948.4286538369533 1736.9481428998618 1857.021140055511 2015.1878963930803 2182.927007289492 2015.7689254820361 1720.7987926858557 1914.356719214543 1770.852449416449 2119.8734137030924 0.8611069473460119 0.9191250011637953 0.8193640863987632 0.8760056747028027 0.9506170903256235 1.0297440371575086 0.9508911770164608 0.8117460134942138 0.9030523741842004 0.8353576387955366 1.0 11.04976240281125 -14.999999999995895 0.21789180077308073 1.5055697746261696 0.8900539215830555 0.0 0.07773845175912533 49.27691427297946 0.6035197855136653 10.650756715658543 0.04461843105025275 1.0000000000094524e-15 14.999999999995895 -0.6155158530431141 IS(ph)GLIYEETR ddPTM_A549_PD325901_60min_R1 2 ISGLIYEETR 10 0 P62805 P62805 HIST1H4A Histone H4 1 IS(1)GLIYEETR;IS(1)GLIYEETR 89.54799999999999 0.00068055 2292800.0 849.25 813.9200000000001 442.30999999999995 827.3299999999999 630.38 675.09 810.45 639.02 669.77 703.5 1055.49 True False 935.4652348151927 882.5118948524881 472.32781642610024 878.4322950972431 586.1042834929407 669.5922908653758 841.2921182452565 626.2742447985079 641.621896087915 659.0808899399393 925.6714213023816 1.010580226727786 0.9533748958251624 0.5102542927830206 0.9489677167102394 0.6331666615226341 0.723358500063972 0.9088452974615907 0.6765621476326511 0.6931421682924805 0.7120030658531508 1.0 9.854356371402066 -10.905196526181355 1.1628151307872112 0.9997526803413669 0.7734127667804174 0.0 0.1710381908642797 0.553618120302686 1.3319902789506368 0.09994838282487 0.023908850873817007 1.2439515735923699e-11 10.905196526181355 -0.2263399135609495 IS(ph)LPSDFQHK ddPTM_A549_MK2206_60min_R1 2 ISLPSDFQHK 10 0 Q5TCX8;Q5TCX8-2;G3V4P9;G3V347;A0A087WW79;J3KPI6;P80192;P80192-4 Q5TCX8 MLK4;MAP3K9 Mitogen-activated protein kinase kinase kinase MLK4;Mitogen-activated protein kinase kinase kinase 9 1 IS(0.819)LPS(0.181)DFQHK;IS(0.87)LPS(0.13)DFQHK 48.659 0.009444899999999999 5655700.0 788.21 1107.33 979.05 649.01 1566.94 1246.12 793.0 1153.21 1519.81 1685.02 1718.43 True False 921.240578115678 1163.6883672111608 1117.8940118645173 808.0174791351662 1336.4452017128672 1377.98359129249 937.0778352417382 1316.6810490575072 1175.5754616378586 1304.3728117027852 1291.6964047447368 0.7132020920176922 0.9008992847983712 0.8654464065690683 0.6255475173323297 1.034643432314092 1.0668014451621897 0.7254629120276309 1.0193425051126528 0.9101019847385687 1.0098137665410267 1.0 10.335051309154041 -2.0000000000973563 0.16378178773491317 0.9994042459948668 0.09606039554979733 0.25648942671022634 0.12308984931835636 64.35431111945289 0.6382136224170684 0.16341999991568304 14.246125617980193 0.009999999997758286 2.0000000000973563 -0.9033438504450695 IS(ph)LPSDFQHK ddPTM_A549_PD325901_60min_R1 2 ISLPSDFQHK 10 0 Q5TCX8;Q5TCX8-2;G3V4P9;G3V347;A0A087WW79;J3KPI6;P80192;P80192-4 Q5TCX8 MLK4;MAP3K9 Mitogen-activated protein kinase kinase kinase MLK4;Mitogen-activated protein kinase kinase kinase 9 1 IS(0.997)LPS(0.003)DFQHK;IS(0.987)LPS(0.013)DFQHK 95.273 0.00017237 6184100.0 1150.3 1408.9299999999998 1095.54 1492.74 1733.92 1405.72 1345.9099999999999 1735.49 1469.95 1564.49 1843.42 True False 1267.077609193897 1527.6654757402646 1169.8899324171957 1584.943159541486 1612.1354408992663 1394.2722823849808 1397.1293415602113 1700.8742904844325 1408.1731133888209 1465.7078344024667 1616.69102640218 0.7837475364811541 0.9449334788107071 0.723632353561518 0.9803624401062296 0.9971821545190044 0.8624234684396223 0.8641906949093507 1.0520713375081916 0.871021791048473 0.9066097420385176 1.0 10.658828269429266 -9.123209460646027 0.015988699378595213 1.8544840433487375 3.452996895234689e-06 0.13848684465432093 0.08786319905307562 585.7282535905306 5.883915514186454 347.1244186946835 334.38336256207486 7.529923072277926e-10 9.123209460646027 -1.8544805903518422 IS(ph)MPDVDLHLK ddPTM_A549_PD325901_60min_R1 4 ISMPDVDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MPDVDLHLK;IS(1)MPDVDLHLK;IS(1)MPDVDLHLK;IS(1)MPDVDLHLK 62.14 0.0022804 6103840.0 1033.15 1188.86 1289.8100000000002 1487.1100000000001 1650.24 1393.17 1580.53 1390.23 1524.03 1553.16 1670.1800000000003 True False 1138.0346274351687 1289.0494045045327 1377.3442628576074 1578.965407228144 1534.3328354189382 1381.824485424041 1640.6779340492028 1362.5007720356632 1459.9803190570872 1455.0932125360569 1464.7584481433382 0.7769435492095574 0.8800423074114873 0.9403217742853553 1.0779698244646203 1.0474988810365213 0.9433804510058157 1.1201013628758054 0.9301880277684745 0.9967379405851473 0.9934014815756601 1.0 10.516447055522336 -5.621779598717854 1.8956905481076536 1.0058513557021769 0.7758095685100331 0.6501312370139931 0.05373202186922206 0.18850854055273247 1.1115980868949014 0.006944835187271284 0.059201088378356505 2.3890233872653866e-06 5.621779598717854 -0.23004178719214374 IS(ph)MSEVDLNVAAPK ddPTM_A549_MK2206_60min_R1 5 ISMSEVDLNVAAPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(0.994)MS(0.006)EVDLNVAAPK;IS(1)MSEVDLNVAAPK;IS(0.71)MS(0.29)EVDLNVAAPK;IS(0.89)MS(0.11)EVDLNVAAPK;IS(0.888)MS(0.112)EVDLNVAAPK 196.58 3.1258e-31 56456600.0 12710.49 14641.48 14499.109999999999 12032.07 20411.3 16316.53 13739.460000000001 16440.1 20732.0 18003.2 20682.8 True False 14855.709970355034 15386.668793182576 16555.30181948311 14979.927690140139 17408.82480868561 18043.134374563957 16235.742035549118 18770.534520694673 16036.235102200986 13936.26461623458 15546.689943759397 0.9555545279474922 0.9897070597564046 1.0648763099651692 0.963544506536791 1.1197769346184006 1.1605772315416027 1.0443214661308862 1.2073653355535892 1.0314887066129532 0.8964136203043492 1.0 13.92431982742595 -5.589681694624172 3.783700274520313 1.0457143463561294 0.9608392929365643 0.12255137443447595 0.08346990456125206 0.33813581137982046 9.338445885779254 0.01044257855326166 0.05084514169396915 2.5722803811969638e-06 5.589681694624172 -0.08487505341956503 IS(ph)MSEVDLNVAAPK ddPTM_A549_PD325901_60min_R1 5 ISMSEVDLNVAAPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(0.999)MS(0.001)EVDLNVAAPK;IS(0.992)MS(0.008)EVDLNVAAPK;IS(0.822)MS(0.178)EVDLNVAAPK;IS(0.94)MS(0.06)EVDLNVAAPK;IS(0.953)MS(0.047)EVDLNVAAPK 270.07 8.424399999999997e-84 99200300.0 26334.6 27678.6 30085.4 27869.899999999998 32412.5 28757.600000000002 30042.1 29674.8 29500.399999999998 29450.899999999998 30555.2 True False 29008.06920549211 30011.17276005513 32127.17616220703 29591.360425864706 30135.957817054685 28523.407640151887 31185.368555167912 29082.912834569754 28260.60077840441 27591.365147877943 26797.10410537146 1.082507613189347 1.1199408951820062 1.198904778511763 1.104274563008961 1.1245975572044724 1.0644212720894117 1.163758905907927 1.0853005877131365 1.0546139861709756 1.0296398088160308 1.0 14.709789480286284 -9.064843602247546 0.6087735683909816 1.0060154514823374 1.1285448919071535 0.5620655820784788 0.0363532792407612 0.29858304171156674 0.2482228858556468 0.01264059030099204 0.010100287165000875 8.613038683445118e-10 9.064843602247546 0.12252944042481606 IS(ph)PDLNIK ddPTM_A549_MK2206_60min_R1 2 ISPDLNIK 8 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 IS(1)PDLNIK;IS(1)PDLNIK 74.16199999999999 0.0050767 6656100.0 2985.2 3735.8 3143.0 2534.6 5472.3 4386.7 3635.3 4591.8 5946.2 5263.200000000001 5427.700000000001 True False 3489.0287788672076 3925.9362631080626 3588.724660936805 3155.577113782518 4667.331919111976 4850.897682344207 4295.786953914615 5242.7017117977275 4599.395194130211 4074.239464548848 4079.852293100684 0.8551850724516178 0.9622741170672026 0.8796212223186584 0.7734537642744616 1.1439953174296926 1.1889885549404362 1.0529270780658142 1.2850224309991574 1.1273435565076977 0.9986242569219166 1.0 11.994301206498916 -6.769687551531779 24.997882628857216 1.0929215884193368 0.8752498419258932 0.6333779236943027 0.08914156327242016 106.42026839873508 322530.6551140031 0.014021146200828942 0.02681632284288238 1.6994658750961466e-07 6.769687551531779 -0.21767174649344367 IS(ph)PKDR ddPTM_A549_MK2206_60min_R1 1 ISPKDR 6 1 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 IS(1)PKDR 41.448 0.042102 8905700.0 1227.4 1096.2 970.47 956.88 1183.0 979.36 747.64 1007.4 1096.5 1802.6 1553.2 True False 1434.555112951095 1151.9918977512343 1108.0972388480245 1191.315642955976 1008.9822671106243 1082.9952251534464 883.4765103910878 1150.20203503311 848.1445007506936 1395.391408039928 1167.4975738607484 1.2287435495109642 0.9867188793735656 0.9491216629972982 1.0204009581077456 0.8642264358409444 0.9276209641893604 0.7567266349595543 0.9851858031957663 0.7264636087816443 1.1951985505422225 1.0 10.18920383658186 -2.000000000026462 0.5937673920969185 0.8736552214595806 21.545362659405257 0.22722986737007678 0.12977978845948185 99.64901700393193 0.720077866495413 0.018335514213878544 2676.6975709076755 0.00999999999939069 2.000000000026462 20.671707437945678 IS(ph)PKDR ddPTM_A549_PD325901_60min_R1 1 ISPKDR 6 1 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 IS(1)PKDR 40.001999999999995 0.045384 16907000.0 2850.5 2425.5 2678.1 2687.7 3434.8 2735.1 3079.5 3111.4 2557.5 2999.1 3619.9 True False 3139.8806615728095 2629.90539729299 2859.851970723562 2853.7131247904213 3193.5514974167227 2712.826252419514 3196.6920576670605 3049.34068615392 2450.0171689458216 2809.736314170391 3174.6752484367353 0.9890399539666115 0.8284013927370999 0.9008329189361344 0.8988992263683155 1.0059458834377728 0.8545208691047552 1.0069351374573405 0.9605205091939618 0.7717378872539017 0.8850468455171764 1.0 11.632393304442202 -4.774404892199732 6.748102137701013 0.9045674303060163 3.801892108062621 0.07826037625925342 0.07346955314597904 6356.967161196875 4590.39961994504 0.012439043904298489 271131.8990673776 1.681106037204739e-05 4.774404892199732 2.897324677756605 IS(ph)PKEEER ddPTM_A549_MK2206_60min_R1 4 ISPKEEER 8 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 IS(1)PKEEER;IS(1)PKEEER;IS(1)PKEEER;IS(1)PKEEER 86.189 0.00095453 470977000.0 15502.300000000001 15051.8 13613.2 14316.3 17846.8 13955.400000000001 14526.9 16961.0 19344.8 20537.699999999997 19593.800000000003 True False 18118.709245153786 15817.872328564146 15543.756460154274 17823.794142683124 15221.559361513011 15432.151165155208 17166.249690760655 19365.27369088404 14963.233687297785 15898.219305947876 14728.118698630398 1.2302120600670259 1.0739913665983074 1.055379629823307 1.2101881107422499 1.03350330568211 1.0478019277907014 1.1655425952234473 1.3148504630591322 1.0159636810021941 1.079446712187775 1.0 13.84628553853862 -8.955042665631058 24.999948171221515 1.0070424299979819 1.134738478150446 0.22872094601588955 0.08596173085700799 107.23073351301272 59629.22743754822 0.014246402547355977 0.015159759700180384 1.1090658538987908e-09 8.955042665631058 0.12769604815246405 IS(ph)PKEEER ddPTM_A549_PD325901_60min_R1 2 ISPKEEER 8 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 IS(1)PKEEER;IS(1)PKEEER 59.177 0.010854 81540000.0 26061.0 26262.0 25680.0 25088.0 30734.0 28134.0 25003.0 26093.0 28861.0 26488.0 27659.0 True False 28706.693534905793 28475.190906497017 27422.799226384792 26637.628781017997 28575.349866544042 27904.886031797985 25954.50284716658 25572.554645437493 27648.072536831038 24815.54315952965 24257.118344846996 1.1834337915494415 1.1738900928661247 1.1305052330014413 1.0981365718025076 1.1780191472172283 1.1503792674419586 1.069974696836987 1.0542288775562634 1.1397921279756789 1.0230210698049087 1.0 14.566120553399141 -14.999999999999925 0.16757113351223524 0.48372970311908414 1.1680273161841201 0.6640090586337313 0.03562542371873762 26.117757250833453 0.2777068431775498 4.457260061092949 0.05400134121414367 1.0000000000001719e-15 14.999999999999925 0.684297613065036 IS(ph)PKEEERKDESPATWR ddPTM_A549_MK2206_60min_R1 3 ISPKEEERKDESPATWR 17 3 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 IS(0.999)PKEEERKDES(0.001)PATWR;IS(1)PKEEERKDESPATWR;IS(1)PKEEERKDESPATWR 69.548 0.00025638 54116600.0 5340.999999999999 5421.57 4266.37 4061.9399999999996 8509.1 4968.4 4868.5 4353.0599999999995 8649.8 8472.300000000001 9326.4 True False 6242.430225087012 5697.504755602226 4871.405418924898 5057.1154823474135 7257.422661936606 5494.152790243 5753.043431115256 4970.119585687143 6690.634110892247 6558.401545732106 7010.397484454603 0.890453107534838 0.8127220700732467 0.6948829120926636 0.7213735731192777 1.0352369716595637 0.7837148752871943 0.8206443991046869 0.7089640204722014 0.9543872691567884 0.9355249199885188 1.0 12.775280530979884 -8.89353908681881 6.93963730641827 0.9800282762282272 0.8092996716998249 0.3616726604725332 0.09134827976644329 0.1532096313914733 8.98262945791429 0.015731303344135292 0.016686249978575114 1.2777942019847093e-09 8.89353908681881 -0.17072860452840233 IS(ph)PKEEERKDESPATWR ddPTM_A549_PD325901_60min_R1 3 ISPKEEERKDESPATWR 17 3 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 IS(1)PKEEERKDESPATWR;IS(1)PKEEERKDESPATWR;IS(1)PKEEERKDESPATWR 75.646 8.1982e-05 64243000.0 13505.3 11348.2 12370.900000000001 12564.099999999999 11646.4 12947.4 11658.9 11087.75 15756.1 15647.5 16060.1 True False 14876.348113923617 12304.55264051136 13210.463666264932 13340.155921858588 10828.397041898825 12841.960667096791 12102.585819494876 10866.596128078396 15093.925910313683 14659.514179580945 14084.80951336193 1.0561980337618888 0.8736044764281915 0.9379227779923096 0.9471307303945498 0.7687996796567378 0.9117596269167804 0.8592651400797032 0.7715117565324195 1.071645725559471 1.0408031550354875 1.0 13.781852432010151 -8.783055720668296 24.999809149138027 1.033832716383063 0.8892352805204731 0.4145546142446507 0.07759772217603408 162.7596630176844 188234.57763991485 0.013332210535016499 0.01419932183430863 1.6479509432511305e-09 8.783055720668296 -0.14459743586258988 IS(ph)PLGDR ddPTM_A549_MK2206_60min_R1 1 ISPLGDR 7 0 A0A087X275;A0A087WZE8;A0A087WY72;A0A087WVC8;Q8NDB6 A0A087X275 FAM156A;FAM156B Protein FAM156A/FAM156B 1 IS(1)PLGDR 82.426 0.014968 2706900.0 416.45 333.95 487.42 566.21 592.37 629.84 714.44 620.39 851.85 624.7 482.39 True False 486.73657877503945 350.9466285842222 556.543485279611 704.931475418133 505.23315770779413 696.4892507460447 844.2445001388493 708.3321823646925 658.9073351249239 483.5798361270072 362.59924971329275 1.3423540703956285 0.9678636369537877 1.5348721369933058 1.9441062715257198 1.3933651492861114 1.9208237504538657 2.328312871045358 1.9534849642539822 1.8171778779076955 1.3336481984156718 1.0 8.502232129649869 -5.838864922038697 7.677208199775636 1.5754107550051208 1.157045210434667 0.1875141250955651 0.3713883348319395 0.3746479934107813 31.65661155242289 0.06523906988004383 0.20544490433380214 1.4492225329647786e-06 5.838864922038697 -0.41836554457045394 IS(ph)PLGDR ddPTM_A549_PD325901_60min_R1 2 ISPLGDR 7 0 A0A087X275;A0A087WZE8;A0A087WY72;A0A087WVC8;Q8NDB6 A0A087X275 FAM156A;FAM156B Protein FAM156A/FAM156B 1 IS(1)PLGDR;IS(1)PLGDR 65.404 0.026225 3542100.0 760.05 731.7 727.41 651.08 658.04 757.72 694.15 841.83 656.24 515.53 794.22 True False 837.2097164807627 793.362926901373 776.7764168716726 691.2957328900357 611.8215405147604 751.5493795412658 720.5662581034552 825.0390402471412 628.6605149360729 482.97934781910004 696.5359749753933 1.2019619180622207 1.139012133478677 1.1151992786863794 0.9924767100715182 0.8783775174518077 1.0789814260028938 1.0344997013670556 1.1844887699824658 0.9025528293183733 0.6934018703573241 1.0 9.444054057430073 -2.00000000000422 0.38418503100334883 0.9709943874856798 4.659458806779026 0.31926632864371607 0.11898153127175382 43.638846898931604 0.5183605341266974 0.021192919186762606 121.88802570841509 0.009999999999902826 2.00000000000422 3.688464419293346 IS(ph)PPIKEEETK ddPTM_A549_MK2206_60min_R1 1 ISPPIKEEETK 11 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IS(1)PPIKEEETK 53.001000000000005 0.0060364 6617300.0 1949.8 2153.3 1655.1 1596.0 2521.6 2056.1 1732.6 2202.9 2276.7 2544.9 2762.3 True False 2278.878571966797 2262.8937725120704 1889.8180675521808 1987.0200716471616 2150.6759803433215 2273.6751372712793 2047.3909928623384 2515.167821098311 1761.0310851428221 1970.0053224901887 2076.344674398369 1.097543485947059 1.0898449570602986 0.9101658750851492 0.9569798772561258 1.0357991170066647 1.0950374305894506 0.9860554551019233 1.211344076015266 0.8481400544218842 0.9487853085186867 1.0 11.01983023643603 -8.800021712548174 24.999995681458383 0.928288390443555 1.04074026357499 0.2719542828892392 0.0835347809867435 168.3188785686769 109064.04070289507 0.01589513278606465 0.016921804316912484 1.5848139577228767e-09 8.800021712548174 0.11245187313143501 IS(ph)PPIKEEETKGDSVEK ddPTM_A549_MK2206_60min_R1 3 ISPPIKEEETKGDSVEK 17 2 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IS(0.999)PPIKEEET(0.001)KGDSVEK;IS(0.998)PPIKEEET(0.002)KGDSVEK;IS(0.999)PPIKEEET(0.001)KGDSVEK 62.589 0.00064143 132550000.0 10657.2 11468.5 11509.099999999999 10737.0 15935.4 12729.7 11096.0 12659.800000000001 17998.2 15729.3 16788.4 True False 12455.87481647582 12052.197664075919 13141.263441039686 13367.56548200224 13591.323769496734 14076.748404709017 13111.999571049584 14454.365419011481 13921.636437219462 12176.040205526719 12619.37694373152 0.9870435657810414 0.9550548904130057 1.04135596389863 1.0592888651798589 1.0770201912581756 1.1154867999803606 1.03903700075801 1.1454103862228684 1.1031952289954234 0.9648685715482156 1.0 13.623353061472244 -5.877668585300163 4.236070097350021 1.062925162920522 0.9712902073312403 0.3396466806703502 0.048760953116991274 0.1791491080670568 5.659386105066107 0.006850402535145894 0.023390628120732088 1.3253525398937025e-06 5.877668585300163 -0.09163495558928181 IS(ph)PPIKEEETKGDSVEK ddPTM_A549_PD325901_60min_R1 6 ISPPIKEEETKGDSVEK 17 2 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IS(1)PPIKEEETKGDSVEK;IS(0.997)PPIKEEET(0.002)KGDSVEK;IS(0.992)PPIKEEET(0.006)KGDS(0.002)VEK;IS(0.999)PPIKEEETKGDSVEK;IS(1)PPIKEEETKGDSVEK;IS(1)PPIKEEETKGDSVEK 85.06200000000001 1.6351e-05 174786600.0 25178.300000000003 25044.5 27490.4 26420.600000000002 31104.799999999996 27526.6 28160.499999999996 27439.999999999996 29238.9 30102.4 32195.4 True False 27734.38248071519 27155.08790868038 29356.063857204368 28052.540456463827 28920.106153734596 27302.43249601513 29232.16323751687 26892.687673736433 28010.090714013677 28201.729326692282 28235.56990345594 0.98224978548496 0.9617333031183722 1.0396837732540785 0.9935177704003165 1.0242437553985715 0.9669517062828402 1.0352956691672426 0.9524400522351368 0.9920143567063378 0.9988014912792847 1.0 14.785226130351282 -6.1341112052031725 0.0022454868776104722 1.135584512732602 0.8535684427536195 0.0015238031800512974 0.027601562154561658 1273657.6533409525 564.8611616284944 35023.83842950056 35921.955459378136 7.343258130227679e-07 6.1341112052031725 -0.28201606997898254 IS(ph)PVPYEDLK ddPTM_A549_PD325901_60min_R1 1 ISPVPYEDLK 10 0 Q9Y2I9;F8VZ81;Q9Y2I9-2;Q9Y2I9-3 Q9Y2I9 TBC1D30 TBC1 domain family member 30 1 IS(1)PVPYEDLK 57.019 0.014027000000000001 618420.0 1646.4 1709.4 2132.1 2265.2 2256.7 2123.3 1786.7 1952.2 1842.6 2279.3 2214.2 True False 1813.5413159843786 1853.4571371398224 2276.7971273588387 2405.1162593575414 2098.197177192359 2106.0085487778715 1854.6938462197543 1913.2618395287263 1765.1619298141047 2135.384609012228 1941.8674369702535 0.9339161270523737 0.9544715060630653 1.1724781434674811 1.2385584173088866 1.0805048466470064 1.0845274546977908 0.9551083719254753 0.9852690266611822 0.9090022811073815 1.0996551918826676 1.0 10.923229002127062 -7.760780325993206 24.674500518983184 0.9583736826028585 1.0836083046848566 0.14117551804553619 0.0933549902782978 14.281894782987063 534685.2695657627 0.014064113534917527 0.02017722028181486 1.7346812090225072e-08 7.760780325993206 0.1252346220819981 IS(ph)S(ph)KSPGHMVILDQTK ddPTM_A549_PD325901_60min_R1 1 ISSKSPGHMVILDQTK 16 1 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 2 IS(0.692)S(0.654)KS(0.654)PGHMVILDQTK 44.294 0.03047 3886700.0 3317.5 3102.4 3092.0 3186.5 3951.4 2795.2 3588.0 4152.6 3511.7 3801.4 3762.3 True False 3654.2901577855814 3363.8501358737485 3301.8417137064557 3383.3228679334316 3673.8672955899683 2772.436817945605 3724.5433034289354 4069.773135348322 3364.115461265705 3561.3789552490152 3299.5609511847097 1.1075080023824098 1.0194841633902705 1.0006912321231487 1.0253857764678198 1.1134412577742696 0.8402441594388974 1.12879966714712 1.2334286881068426 1.019564575722663 1.0793493461517356 1.0 11.688058352863921 -8.979117156797859 24.956951401931395 1.0086313392246213 1.0558746063665847 0.0 0.09520050965268319 356.0912047924238 425567.4501692898 0.016369346220782014 0.01674123098821075 1.0492593386026594e-09 8.979117156797859 0.04724326714196336 IS(ph)SEKQEAK ddPTM_A549_PD325901_60min_R1 1 ISSEKQEAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 IS(0.559)S(0.441)EKQEAK 64.439 0.0017494 32328000.0 3588.0 3327.3 4114.8 3913.5 4411.2 3754.7 3509.9 3745.0 3571.8 4017.0 4814.3 True False 3952.2511186540037 3607.7032481603637 4394.055072302495 4155.228006796633 4101.372529813856 3724.1229680668157 3643.471165190978 3670.3030371043355 3421.689667269084 3763.3659344544926 4222.171620362161 0.9360706939513262 0.8544662729391633 1.0407097265093148 0.9841447436095017 0.9713893461919619 0.8820396949537962 0.8629377232369478 0.8692927164314348 0.8104098968330391 0.8913341931211423 1.0 12.04376950636309 -7.259308772450059 24.714638149019045 0.8992170621902822 0.9577590612161285 0.24520317426150062 0.05993584452323906 302.1267964927393 3504603.0628430718 0.012016967915555421 0.020170913491460794 5.504162251708212e-08 7.259308772450059 0.058541999025846336 IS(ph)SGKSS(ph)PFK ddPTM_A549_PD325901_60min_R1 1 ISSGKSSPFK 10 1 O95810 O95810 SDPR Serum deprivation-response protein 2 IS(0.492)S(0.492)GKS(0.295)S(0.72)PFK 41.996 0.024083 4782400.0 1865.6 1833.2 1692.0 2252.5 2195.6 2117.5 2126.9 2107.3 2154.1 2348.7 2208.1 True False 2054.994338617867 1987.6901976159597 1806.8292948225485 2391.631809201335 2041.3886304088007 2100.2557820548864 2207.8403433843387 2065.2682483551307 2063.570668084533 2200.4026811683507 1936.5176982991684 1.0611802517595146 1.026425009883326 0.9330300964506937 1.2350167578132079 1.05415438867496 1.084552846534544 1.140108528480515 1.0664856046340516 1.0656089897329388 1.1362677878446197 1.0 10.919248971224198 -10.260691737752063 0.801111712134852 1.0024262667179813 1.0747191313790176 0.0 0.0800437641002842 0.9483257354587363 1.165217177611516 0.037459020249288495 0.013514332969522232 5.486662700897846e-11 10.260691737752063 0.07229286466103635 IS(ph)SKSPGHMVILDQTK ddPTM_A549_PD325901_60min_R1 1 ISSKSPGHMVILDQTK 16 1 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 1 IS(0.333)S(0.333)KS(0.333)PGHMVILDQTK 122.53 2.1138e-08 14916000.0 2197.2 2146.9 2287.4 2867.9 3568.7 3285.5 2853.6 2757.7 3224.6 3121.6 3171.4 True False 2420.2581265068507 2327.8267975462054 2442.6367192536027 3045.043669526527 3318.046823346645 3258.7439773040546 2962.195309549835 2702.6955101262006 3089.081275848562 2924.5016432644097 2781.3379051609904 0.8701776659412264 0.8369449800496158 0.8782236472314633 1.0948125590480071 1.1929678940447146 1.1716461963349365 1.0650253261400744 0.9717249763544147 1.1106458047102188 1.0514729755912677 1.0 11.441563313232335 -6.224599432495924 6.167798863639932 1.06933894962145 0.8572587848869561 0.7058066471721132 0.06301688091596538 0.10296469663372847 11.651146080959206 0.010330028278977079 0.02730489692915163 5.962118004518609e-07 6.224599432495924 -0.21208016473449398 IS(ph)SKTGIPLNVLPK ddPTM_A549_PD325901_60min_R1 1 ISSKTGIPLNVLPK 14 1 Q96GA3 Q96GA3 LTV1 Protein LTV1 homolog 1 IS(0.354)S(0.292)KT(0.354)GIPLNVLPK 104.45 6.5101e-06 4353100.0 3143.9 3307.6 3551.5 2988.3 3389.7 3689.3 3015.8 3249.7 3619.6 3524.6 4171.8 True False 3463.066413583145 3586.343060023209 3792.5261469044217 3172.8805040782895 3151.6191658301655 3659.2555639835145 3130.5679193090823 3184.8821841596678 3467.4807994980647 3302.0561544880015 3658.6950472190892 0.9465304893927581 0.9802246466944892 1.0365789162414767 0.86721644278332 0.8614052620279617 1.000153201280017 0.8556515038575223 0.8704967599254936 0.9477370359504645 0.9025229246689573 1.0 11.837113456502157 -9.888995830246301 1.1168051445452132 0.9916380349744338 0.9294873303790577 0.0 0.06407947039134744 0.5973084263311811 1.5107861894089525 0.01889444883061392 0.011384007238823648 1.291231670943947e-10 9.888995830246301 -0.06215070459537608 IS(ph)SPTETER ddPTM_A549_MK2206_60min_R1 2 ISSPTETER 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 1 IS(0.816)S(0.179)PT(0.005)ETER;IS(0.743)S(0.153)PT(0.104)ETER 139.98 4.159e-05 31384000.0 3178.7 3026.9 2696.1 3171.4 3706.2 3506.7 3351.3 3843.2 4672.3 5368.0 4483.1 True False 3715.1868482464106 3180.9562810647794 3078.4475209518646 3948.3931423695576 3161.022889573453 3877.776666440932 3960.187830070156 4387.985369306379 3614.0315101299307 4155.365071762086 3369.822542734434 1.1024873865410525 0.9439536476254919 0.913534016083193 1.171691711447109 0.9380383831750526 1.15073616407537 1.175191803084287 1.3021413779687516 1.0724693850487848 1.2331109484448475 1.0 11.71845690471673 -7.2619009897968985 24.998292048785675 1.0763747932207326 1.0132386039476786 0.10205582425634008 0.11683273611222496 104.69732110440872 5669743.189706395 0.017578288981653117 0.029160913058865354 5.4714068549122584e-08 7.2619009897968985 -0.06313618927305398 IS(ph)SPTETER ddPTM_A549_PD325901_60min_R1 1 ISSPTETER 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 1 IS(0.444)S(0.323)PT(0.231)ET(0.001)ER 86.27600000000001 0.0012062999999999998 17194000.0 1341.9 1565.1 1466.2 1431.3 1530.6 1282.4 1184.5 1412.6 1244.1 1543.2 1726.6 True False 1478.1287001454325 1696.9964697189278 1565.7051489768446 1519.7081502818505 1423.0959362833441 1271.956559578365 1229.5767956832701 1384.4245848367386 1191.8148034742906 1445.7620886358409 1514.239145819186 0.9761527459031458 1.1206925104296337 1.0339880284430345 1.0036117177909212 0.9398092370102251 0.8399971451604833 0.8120096479331759 0.9142707667141843 0.7870717163566211 0.9547779111559689 1.0 10.564377354742438 -6.751262713342347 2.234596182455147 0.8874583233199093 1.0487496757480965 0.5319773111444075 0.06552889070855901 0.2295591626462505 2.3367074962849905 0.012599726663892101 0.028508601040941522 1.773116563045773e-07 6.751262713342347 0.16129135242818726 IS(ph)TPLTGVR ddPTM_A549_MK2206_60min_R1 1 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.602)T(0.396)PLT(0.002)GVR 89.08 0.0011004 21548000.0 1273.7 1521.6 1276.2 1084.9 2255.1 1713.9 1173.3 1226.8 2785.2 1871.3 2095.1 True False 1488.669421024776 1599.0429407209235 1457.1843500755806 1350.700548703011 1923.3777773129068 1895.2637604052566 1386.4734225588022 1400.7026569174307 2154.3566470504634 1448.5720303257062 1574.8288481815962 0.9452896565513734 1.015375697852682 0.9252969627513137 0.8576808522796754 1.221324958285955 1.2034728488709463 0.8803962564946141 0.8894316728670398 1.367994147134166 0.9198282289521972 1.0 10.620979330229089 -7.001105556059817 0.6900046231479083 1.1479110880718368 0.9365752790671208 0.0 0.1683074282774754 1.2047574901718425 1.0463314070035337 0.03589037191544991 0.12699908739437538 9.974576004831647e-08 7.001105556059817 -0.21133580900471605 IS(ph)TPQTNTVPIKPLISTPPVSSQPK ddPTM_A549_MK2206_60min_R1 1 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 IS(0.36)T(0.325)PQT(0.158)NT(0.158)VPIKPLISTPPVSSQPK 60.541000000000004 0.00010841 8264000.0 952.96 910.43 1033.5 1466.1 1682.1 1223.6 935.03 984.82 1685.7 1882.4 1455.1 True False 1113.796350364898 956.7669982390579 1180.065840623031 1825.2945658157305 1434.6653182643968 1353.0805398400548 1104.9128477756385 1124.4212508847602 1303.891641509753 1457.1645326164214 1093.7585112830127 1.0183201674548619 0.8747515912966387 1.0789089442044908 1.6688277594974812 1.3116837980821652 1.237092581115414 1.0101981711479817 1.0280342866230856 1.1921202240339577 1.3322543482721083 1.0 10.095078528247527 -7.749890952785909 24.88539025045045 1.0818385366743868 1.2046784908967914 0.030681978509439767 0.20822397430619663 475.99434984029267 1025703.4033079697 0.0326816116190229 0.04824491657102869 1.778725975148414e-08 7.749890952785909 0.12283995422240457 IS(ph)TPQTNTVPIKPLISTPPVSSQPK ddPTM_A549_PD325901_60min_R1 1 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 IS(0.5)T(0.5)PQTNTVPIKPLISTPPVSSQPK 134.67 2.2993000000000002e-24 21975000.0 2630.8 2365.2 2972.5 2850.3 2685.6 3243.2 2968.3 3497.3 2839.4 2771.1 3182.8 True False 2897.876879307403 2564.5237046701227 3174.231725094578 3026.35655749903 2496.9727208170325 3216.7884544795324 3081.2602808160827 3427.5436079212245 2720.0698922794795 2596.1322730811166 2791.3357774315427 1.0381685008078443 0.9187442533444966 1.13717301614475 1.0841965276867345 0.8945440176010034 1.1524190247865742 1.103865864411094 1.2279223573292535 0.974468895598924 0.9300680677943937 1.0 11.446739965245856 IS(ph)TYGLPAGGIQPHPQTK ddPTM_A549_MK2206_60min_R1 2 ISTYGLPAGGIQPHPQTK 18 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 IS(0.656)T(0.344)YGLPAGGIQPHPQTK;IS(0.738)T(0.262)YGLPAGGIQPHPQTK 170.04 9.2789e-31 23021000.0 9789.0 9866.0 8752.0 7608.6 11410.7 9190.9 8842.7 8730.9 11989.099999999999 12167.0 11712.0 True False 11441.143881927877 10368.13725890683 9993.165202837708 9472.707341563031 9732.20114566289 10163.474937574341 10449.304128237218 9968.531812259855 9273.587992658591 9418.466249651508 8803.58716524407 1.299600227404653 1.1777173400224277 1.135124241433084 1.076005401407349 1.1054813183522418 1.1544697345303754 1.18693708963209 1.1323261331034358 1.0533874224895565 1.069844152487629 1.0 13.103875777844788 -2.000000000026946 0.07589313557492094 0.8538231857279416 1.819733762117298 0.5010654364995446 0.0541636369969045 84.2443664180288 0.45533242602176915 0.912871809789894 8.586842053338502 0.009999999999379545 2.000000000026946 0.9659105763893564 IS(ph)TYGLPAGGIQPHPQTK ddPTM_A549_PD325901_60min_R1 2 ISTYGLPAGGIQPHPQTK 18 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 IS(0.827)T(0.173)YGLPAGGIQPHPQTK;IS(0.96)T(0.04)YGLPAGGIQPHPQTK 228.6 9.7766e-65 39320000.0 7555.700000000001 9038.1 8723.3 9086.4 11006.0 9193.8 9071.7 9209.0 9560.8 10655.900000000001 11252.900000000001 True False 8322.749101787647 9799.772406214704 9315.315595464268 9647.646291288353 10232.976528638765 9118.928740994676 9416.92850772472 9025.319270679256 9158.992824577597 9983.08465545273 9868.864638010371 0.8433340011304045 0.9929989685409653 0.9439095516201444 0.977584215121364 1.0368950131533876 0.9240099115224173 0.9542058639101201 0.9145245782293778 0.9280695561778535 1.0115737748598188 1.0 13.268668404264826 -8.193229170653971 0.00523815309032142 1.9105005793273944 1.0436828055568022e-07 0.13600440430125538 0.04834669118391996 8712.514601329998 30.66306395938865 5562.5781810867065 5619.357345713793 6.408713092107561e-09 8.193229170653971 -1.910500474959114 ISAALNGHAQS(ph)PDIK ddPTM_A549_MK2206_60min_R1 1 ISAALNGHAQSPDIK 15 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 ISAALNGHAQS(1)PDIK 56.9 0.0034907 2631800.0 1140.1 1843.5 1777.4 1157.8 1768.2 1166.9 1383.2 1211.8 2311.9 1936.3 3316.5 True False 1332.521007231175 1937.3262757748585 2029.4620465634987 1441.4610519756163 1508.1001223203755 1290.3805834744687 1634.5095355691951 1383.5763609818566 1788.2583413456719 1498.8884851812456 2492.921519256485 0.534521843924152 0.7771308726769172 0.8140898262889505 0.5782215929547323 0.6049529079319621 0.5176178124770351 0.655660245596776 0.5550019727032999 0.7173343916093358 0.6012577907499831 1.0 11.283621750098128 -10.07236831625836 0.7295313347112157 0.9885762716241612 0.6361080682720854 0.0 0.1458957080343929 0.29197353478251237 0.3074225972000312 0.05175007393901154 0.020594015629161248 8.46509202510127e-11 10.07236831625836 -0.35246820335207574 ISAALNGHAQS(ph)PDIK ddPTM_A549_PD325901_60min_R1 1 ISAALNGHAQSPDIK 15 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 ISAALNGHAQS(1)PDIK 81.723 9.920799999999999e-05 3860900.0 2017.2 2068.1 1863.4 2555.6 2247.7 2591.8 2267.6 2400.7 2498.2 2413.8 2918.9 True False 2221.9846590158477 2242.3860449975805 1989.8615295344773 2713.453607811288 2089.8293061440427 2570.6932401085523 2353.8947588783326 2352.8161551872818 2393.2093417245173 2261.392256058316 2559.8938044316124 0.8679987643117123 0.8759683863118182 0.7773219053422012 1.0599867866056933 0.8163734380411375 1.0042187045643238 0.9195282846512381 0.919106937605832 0.9348861806616603 0.883392995499837 1.0 11.321868246841387 -2.0000000016177024 0.0834326277633059 1.0621687298090658 0.5057370556530553 0.056326572845200595 0.07752058800653379 140.74703815103751 0.8274075151542071 0.777800184297486 9.01256748573593 0.009999999962751025 2.0000000016177024 -0.5564316741560106 ISAISEKPLS(ph)PHPIR ddPTM_A549_MK2206_60min_R1 2 ISAISEKPLSPHPIR 15 1 Q2KHM9;Q2KHM9-2;I3L341 Q2KHM9 KIAA0753 Uncharacterized protein KIAA0753 1 ISAISEKPLS(1)PHPIR;ISAISEKPLS(1)PHPIR 100.02 3.4488e-06 19174700.0 5949.3 8144.9 7188.7 5769.5 9450.099999999999 6823.700000000001 6640.7 6300.1 10000.5 10231.0 9956.8 True False 6953.396393579884 8559.440620319312 8208.16575567178 7183.027759002694 8060.002808471768 7545.779404794532 7847.22923138689 7193.158468247069 7735.402717516928 7919.809994261901 7484.251766299701 0.9290703480727135 1.1436601663857704 1.0967249648965232 0.959752288311122 1.0769283370135376 1.0082209471856465 1.0484988314692478 0.961105891792233 1.0335572558299169 1.0581966296114522 1.0 12.869642375560757 -7.100621164237987 0.9312892070894796 1.0130368828128953 1.0515510078944639 0.01381934215175229 0.06132407885542518 1.2563202488915661 2.1220635292291217 0.009524761639435178 0.025262157219566487 7.931929322406575e-08 7.100621164237987 0.038514125081568595 ISAISEKPLS(ph)PHPIR ddPTM_A549_PD325901_60min_R1 1 ISAISEKPLSPHPIR 15 1 Q2KHM9;Q2KHM9-2;I3L341 Q2KHM9 KIAA0753 Uncharacterized protein KIAA0753 1 ISAISEKPLS(1)PHPIR 84.035 8.1856e-05 5138600.0 730.55 983.84 784.74 634.1 891.76 910.92 1098.8 1299.6 1009.5 865.46 1347.6 True False 804.7148981975151 1066.7516495867808 837.9971754249681 673.2669168544131 829.1258540049884 903.5017695345631 1140.6154352864314 1273.6784584835227 967.0742256308138 810.814707899672 1181.853743140238 0.6808921178853754 0.9026088513730761 0.7090531973934204 0.5696702496076316 0.7015469205199317 0.7644784938734625 0.9651070971402649 1.077695498175013 0.818268953535024 0.6860533400226844 1.0 10.20683579471067 -7.657481124707966 4.634993883254061 0.9301842850390435 0.7169287534584083 0.37758949243424944 0.11992335296621073 0.1465993885515697 5.402532770847655 0.016752713402367708 0.02500150200105534 2.200487345065444e-08 7.657481124707966 -0.21325553158063515 ISAPELLLHS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 ISAPELLLHSPAR 13 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR 93.75399999999999 5.3694e-05 18658500.0 589.12 507.64 379.64 338.11 601.11 601.3399999999999 432.29999999999995 372.15999999999997 605.58 532.5 971.92 True False 688.5490533988509 533.4767076942494 433.4786606038971 420.94696517833466 512.6875152856019 664.9733996628136 510.8433142181627 424.9148196921996 468.41709691254454 412.20788016268847 730.5654403726106 0.9424878530356842 0.7302243963554587 0.5933467922912009 0.5761933728532778 0.7017680921562832 0.9102174328471614 0.6992437446228185 0.5816245831112407 0.6411706207641543 0.5642312890580341 1.0 9.512869697947242 -10.773920395568462 0.9973382043297735 1.0019129395641053 0.7011315434784277 0.0 0.17218043232496655 0.4003033945034161 0.7000766165862964 0.08565114254851143 0.02113961293953721 1.6829825167256066e-11 10.773920395568462 -0.30078139608567767 ISAPELLLHS(ph)PAR ddPTM_A549_PD325901_60min_R1 3 ISAPELLLHSPAR 13 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR 84.84200000000001 0.00010629 29552300.0 876.9199999999998 823.49 861.9399999999999 830.3 1004.87 1013.5600000000001 631.0799999999999 728.701 792.1600000000001 818.9000000000001 1003.44 True False 965.9442728456157 892.888392338406 920.436431666281 881.585745251883 934.2913978133045 1005.3059034047466 655.0960947402266 714.1664869001244 758.8682700106046 767.1945142456514 880.0232413302467 1.0976349572148691 1.0146191036826622 1.0459228670767213 1.0017755257455183 1.0616667309843155 1.142362901558284 0.7444077201301873 0.811531392989789 0.862327532240508 0.8717889235356523 1.0 9.781397815466844 -7.7408840098348675 24.999783773294627 0.9091191537090115 1.0552695508598968 0.6123799572819955 0.07538874840862989 194.17346070605484 236156.5241142466 0.013719150401579094 0.020335954614183402 1.8160006104149507e-08 7.7408840098348675 0.1461503971508853 ISAS(ph)LKQALDK ddPTM_A549_PD325901_60min_R1 1 ISASLKQALDK 11 1 Q9UHD1-2;Q9UHD1;E9PPQ5 Q9UHD1-2 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 IS(0.156)AS(0.844)LKQALDK 64.675 0.0016954999999999997 3192200.0 1417.1 1588.8 1751.3 1751.5 1983.6 1737.7 1690.9 2106.7 1881.0 1715.9 1665.5 True False 1560.9629487861175 1722.6937518940852 1870.1537494224167 1859.6861770548883 1844.2787790485065 1723.548747332599 1755.2481247959843 2064.6802158258206 1801.9481113537017 1607.5577811626733 1460.6540584743727 1.0686739544725024 1.179398874017718 1.2803536460753473 1.2731872863840856 1.2626389995279395 1.1799842251031125 1.2016864052185703 1.4135312902100463 1.2336583744105738 1.1005739325037298 1.0 10.512398815150625 -10.48414798574154 0.8974381269041818 1.005332068418741 1.2351537633121616 0.38682882011675856 0.08526469085657817 0.3481312173952251 0.5205900496119503 0.04888911060337262 0.015511671603580154 3.279835137654058e-11 10.48414798574154 0.22982169489342064 ISASS(ph)ATR ddPTM_A549_MK2206_60min_R1 1 ISASSATR 8 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;A0A1B0GV30;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 IS(0.006)AS(0.205)S(0.788)ATR 56.208999999999996 0.019257 20266000.0 1803.7 1987.0 1701.9 1559.8 2511.5 1749.9 1469.5 1880.1 2762.5 2678.6 2760.6 True False 2108.1204637688525 2088.129812836801 1943.255011278507 1941.9510700220826 2142.0616769639314 1935.0732565103892 1736.4891284839005 2146.60993256477 2136.7981608060127 2073.502399631505 2075.0668313159813 1.015928948385681 1.006295210025855 0.9364782772061945 0.9358498920203556 1.0322856327501813 0.9325353898520897 0.8368352779185627 1.034477492565103 1.0297490801541471 0.9992460813016397 1.0 11.018942086497784 ISASS(ph)ATR ddPTM_A549_PD325901_60min_R1 2 ISASSATR 8 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;A0A1B0GV30;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 ISAS(0.032)S(0.968)ATR;IS(0.001)AS(0.106)S(0.892)AT(0.001)R 89.029 0.0038375 25734000.0 6142.2 5803.7 6387.9 6383.5 7338.9 6280.8 6258.6 5459.0 5977.7 7033.8 7157.2 True False 6765.751622351344 6292.79816708692 6821.42130756321 6777.794297019629 6823.440981830551 6229.6512471926 6496.774447837332 5350.115962497345 5726.478057011704 6589.684667604182 6276.909773228927 1.0778793812215257 1.0025312445824468 1.086748344966918 1.0797979486541256 1.087070107480688 0.9924710521986654 1.035027534655051 0.8523487123099386 0.9123084868027226 1.0498294392742815 1.0 12.615838755865902 -7.746931023420109 1.962537069344885 0.950520689312315 1.062548316964376 0.4043464112013393 0.05603568917015115 0.2127720390261132 1.6798363863277135 0.008638069374181486 0.01323749975000923 1.7908902686009926e-08 7.746931023420109 0.11202762765206087 ISDEILS(ph)DTIGEK ddPTM_A549_PD325901_60min_R1 2 ISDEILSDTIGEK 13 0 Q9NVA4 Q9NVA4 TMEM184C Transmembrane protein 184C 1 IS(0.002)DEILS(0.968)DT(0.03)IGEK;IS(0.001)DEILS(0.966)DT(0.033)IGEK 56.122 0.016332 1384180.0 1692.04 1795.03 1772.02 2049.68 1895.49 1839.2 1955.68 1533.87 1866.3899999999999 1956.55 2296.3 True False 1863.814655185988 1946.3034777583323 1892.2799332218992 2176.284078438974 1762.357321485508 1824.222164984817 2030.1044725891593 1503.2757595522635 1787.9521188460576 1833.0130990930872 2013.8696574450335 0.9254892183789997 0.9664495765965204 0.9396238362430103 1.0806479309092891 0.875109923311216 0.9058293113662483 1.008061502433441 0.7464612985228881 0.8878191854354694 0.9101945065395165 1.0 10.975754596287377 ISDGKKQEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A549_PD325901_60min_R1 1 ISDGKKQEGPATQVDSAVGTLPATSPQSTSVQAK 34 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 ISDGKKQEGPATQVDSAVGT(0.001)LPAT(0.498)S(0.498)PQS(0.002)TSVQAK 119.18 2.2426999999999998e-21 6747500.0 714.78 343.2 685.45 649.59 752.69 966.09 786.97 876.35 697.02 679.92 1016.0 True False 787.343939406775 372.12266846050477 731.9687589456953 689.7136989740704 699.8236510395338 958.2224833461192 816.9185739965083 858.8705117667242 667.7266733523427 636.9897351641271 891.038440954646 0.8836251088822001 0.41762807456636525 0.8214783170987262 0.7740560533338168 0.7854023113635284 1.0753997126313577 0.9168163083079482 0.9638983822589545 0.7493803215010003 0.7148846849768515 1.0 9.79934386324844 -6.488164656740583 1.5117147581043497 0.8989276594863397 0.6673442597183423 0.23937780686714916 0.14697202916406105 0.3895754330864771 1.7231001972626632 0.021384271415285587 0.06765894574087561 3.2496406839879106e-07 6.488164656740583 -0.23158339976799736 ISDS(ph)ES(ph)EDPPR ddPTM_A549_MK2206_60min_R1 1 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 IS(0.468)DS(0.679)ES(0.853)EDPPR 117.52 1.9897e-05 5853700.0 981.14 1160.8 650.54 1010.8 902.89 792.45 670.48 922.09 830.05 1166.0 1183.7 True False 1146.7324454300458 1219.8797618223252 742.7963540966676 1258.446045376536 770.0760770511504 876.306533014263 792.2975371663051 1052.7990812821927 642.0450003174773 902.5997901778306 889.7546215419576 1.2888187570666865 1.3710294189967298 0.8348328135788616 1.4143742723085055 0.8654926407874088 0.9848856210441606 0.8904674592116668 1.1832465443761075 0.7215978257070517 1.0144367540497987 1.0 9.797263711140971 -5.971953347695149 0.5034403481759802 0.8848216454619583 1.4448467313730207 0.25324388515449947 0.19008226204516535 1.9052120442043017 0.49114912137268274 0.038661028318279174 0.5489729304667834 1.0667107021014336e-06 5.971953347695149 0.5600250859110624 ISDS(ph)ESEDPPR ddPTM_A549_MK2206_60min_R1 2 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.002)DS(0.926)ES(0.072)EDPPR;IS(0.002)DS(0.636)ES(0.362)EDPPR 115.29 2.1266999999999998e-05 8844700.0 2001.05 2526.6 1901.3999999999999 1882.5 2077.7 1657.4699999999998 1404.77 1690.67 2347.7 2605.1 2456.7 True False 2338.778319024597 2655.1931480188546 2171.0471111375236 2343.7125845086352 1772.0730823125466 1832.8623752604576 1659.9985253625919 1930.3276499597255 1815.9496985065239 2016.6061006794737 1846.6335885292938 1.2665091404988793 1.4378559799367228 1.1756783395598263 1.2691811732804166 0.9596235513748403 0.9925425307140634 0.8989322709572597 1.0453225057479258 0.9833838774441402 1.09204452534926 1.0 10.850681917927222 -6.737837264041407 6.983007066975913 0.9869686408196373 1.2916463209770432 0.7848918880625451 0.073268019033765 0.04777446915988163 8.673920724411031 0.008849762253579214 0.018159744307665315 1.828785358134212e-07 6.737837264041407 0.30467768015740593 ISDS(ph)ESEDPPR ddPTM_A549_PD325901_60min_R1 2 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.002)DS(0.986)ES(0.012)EDPPR;IS(0.001)DS(0.961)ES(0.037)EDPPR 128.01 1.1604000000000001e-07 10166600.0 1950.72 1535.0 1683.22 1950.68 2195.04 1769.71 1705.91 1604.95 1977.33 2432.7 2270.6000000000004 True False 2148.755658355837 1664.3598370829689 1797.4534312241205 2071.1690732842867 2040.8679628769064 1755.29806850548 1770.8293385597715 1572.9380131910812 1894.2296964503003 2279.09890683282 1991.3305945193108 1.079055212765677 0.8358028755565473 0.902639389045298 1.0400930307527607 1.0248765164829667 0.8814699444364199 0.8892693877317913 0.7898929577641397 0.9512381829836498 1.1445105665053943 1.0 10.959517037353214 -9.698199270873213 1.5773727156266917 0.9884742729202042 0.9291932075286061 0.1479151706845303 0.09613124738385359 0.6652113987696184 3.328981163883287 0.020946253436975863 0.01548282509512701 2.0035525101151048e-10 9.698199270873213 -0.05928106539159805 ISDSEGFK ddPTM_A549_MK2206_60min_R1 2 ISDSEGFK 8 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 63.565 0.027232999999999997 3930700.0 2988.9 2705.9 3247.7 2946.2 3972.7 2676.1 2949.3 2978.3 4224.8 3820.4 4460.8 False True 3493.3532484108923 2843.618752166634 3708.272695298902 3668.0191322599426 3388.3210926038673 2959.28312574859 3485.1496336424407 3400.48314566122 3267.8895456192718 2957.3689866169657 3353.060248183124 1.0418402861397398 0.8480667037544184 1.1059367923103238 1.0939317700144162 1.0105160187443247 0.8825618708617287 1.039393680901168 1.0141431689167508 0.9745991135679706 0.8819910075339189 1.0 11.711262690541806 -7.015728040662311 24.894104763043384 0.9859539008709854 1.0204861245625578 0.07708203008327974 0.07882973621075512 1809.7465832110279 2864446.704097832 0.010315173598742197 0.018233975770872476 9.644327715478112e-08 7.015728040662311 0.034532223691572383 ISDSESEDPPRNQAS(ph)DSENEELPKPR ddPTM_A549_MK2206_60min_R1 2 ISDSESEDPPRNQASDSENEELPKPR 26 2 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.007)DS(0.153)ES(0.141)EDPPRNQAS(0.543)DS(0.156)ENEELPKPR;ISDS(0.008)ES(0.007)EDPPRNQAS(0.975)DS(0.009)ENEELPKPR 93.411 2.3039000000000003e-09 12779700.0 3241.2 3805.0 3761.3 2936.5 4929.5 2943.5 3494.4 4451.0 5459.0 5032.8 5925.9 True False 3788.2353202681206 3998.658247530965 4294.708898244223 3655.942631824495 4204.377080069164 3254.979216262832 4129.287247753757 5081.942880615813 4222.54521623168 3895.8869845685967 4454.335483480173 0.8504602615401505 0.8977002882609131 0.9641637712678 0.8207605029713897 0.9438842439376127 0.7307440645938317 0.9270265481951404 1.1408980979235293 0.9479629973745499 0.8746281008732507 1.0 12.120994505142114 -8.001902938067682 24.999581276892457 0.9893798323514569 0.87114245054831 0.3252124549767649 0.08272701030824615 61.12973707570881 803095.2511333438 0.011363268032056588 0.015573391975694548 9.956279087130184e-09 8.001902938067682 -0.11823738180314691 ISDSESEDPPRNQAS(ph)DSENEELPKPR ddPTM_A549_PD325901_60min_R1 2 ISDSESEDPPRNQASDSENEELPKPR 26 2 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 1 IS(0.002)DS(0.046)ES(0.009)EDPPRNQAS(0.788)DS(0.154)ENEELPKPR;IS(0.029)DS(0.084)ES(0.026)EDPPRNQAS(0.698)DS(0.162)ENEELPKPR 73.107 3.6824e-06 19775600.0 4834.5 4610.4 4464.5 4851.200000000001 6061.200000000001 5115.200000000001 4309.7 4484.1 5510.799999999999 5633.299999999999 6084.700000000001 True False 5325.294881029203 4998.934588200208 4767.487817219426 5150.84760612542 5635.482222004841 5073.5435071391585 4473.707991858328 4394.661107791604 5279.200240323219 5277.612476615007 5336.320474091276 0.9979338585237516 0.9367755577032653 0.8934035803071372 0.9652433040957045 1.0560614283504983 0.9507568992102435 0.8383506975600368 0.8235377033910192 0.9892959513872179 0.9889984123402434 1.0 12.381629595206094 -8.96090714732055 24.99978648380334 0.995277792016327 0.9324879391546154 0.15384443133934056 0.06274038803856667 214.26577055645038 137023.1222423814 0.011599962567912346 0.01232872206924483 1.094190280455755e-09 8.96090714732055 -0.06278985286171168 ISDYFEYQGGNGS(ph)SPVR ddPTM_A549_MK2206_60min_R1 1 ISDYFEYQGGNGSSPVR 17 0 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;C9JWT6 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.674)S(0.326)PVR 185.33 2.7738e-39 14292000.0 2098.6 2567.6 2037.7 2624.4 3245.3 2595.2 2587.8 2175.9 3741.8 3296.6 3938.6 True False 2452.792374156077 2698.279872893694 2326.676500665263 3267.3781178137924 2767.920669022915 2869.822341445664 3057.9697629742336 2484.340488414278 2894.288274426765 2551.8957704118643 2960.5369201699336 0.8284957898837106 0.9114157146666537 0.7858968029798166 1.1036437666267125 0.9349387437681531 0.9693587409411321 1.0329105312419842 0.8391520036411766 0.9776227598136604 0.8619705949370111 1.0 11.531643130050371 -6.24518327451794 24.999321603965722 0.9823853785437479 0.8488840651826535 0.3246556619913086 0.07587012931009383 540.9553215315399 831902.5401678846 0.008525635890314326 0.022481353689892725 5.686129226103066e-07 6.24518327451794 -0.1335013133610944 ISDYFEYQGGNGS(ph)SPVR ddPTM_A549_PD325901_60min_R1 1 ISDYFEYQGGNGSSPVR 17 0 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;C9JWT6 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.5)S(0.5)PVR 90.146 6.1711e-06 45828000.0 2111.5 1820.0 1766.0 2035.4 2511.5 2286.2 1638.1 2135.1 2434.0 2181.7 2517.5 True False 2325.857925595856 1973.3777872905548 1885.8513798206973 2161.122035271208 2335.100904204638 2267.5819451871953 1700.4387919027156 2092.5137555464526 2331.707444463004 2043.9470896687478 2207.8634597473647 1.0534428274210368 0.8937952111931591 0.8541521766189683 0.9788295674400512 1.0576292179190432 1.0270480881307142 0.7701738911414788 0.9477550553718974 1.0560922298744915 0.9257579225042417 1.0 11.108435239370422 -8.745358833836724 23.010671127473223 1.0264879898847208 0.9443368281043131 0.01566499937653376 0.08817693943865189 126.05650517048767 180381.38769045318 0.014324233488053732 0.016208994371577946 1.7973852200909737e-09 8.745358833836724 -0.08215116178040771 ISDYFEYQGGNGSS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 ISDYFEYQGGNGSSPVR 17 0 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;C9JWT6 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.199)S(0.801)PVR;ISDYFEYQGGNGS(0.075)S(0.925)PVR 278.27 2.3229999999999994e-115 26510000.0 3184.1 4400.799999999999 4267.8 3243.1 5706.1 3735.1 4287.1 4004.0 6541.7 5766.799999999999 6257.5 True False 3721.4982362290866 4624.781922663409 4873.038214427643 4037.6596455882927 4866.740248824963 4130.34580284128 5066.010576878757 4571.579261735725 5060.015394948301 4464.07587478346 4703.590051785752 0.7912037816340294 0.9832451110205869 1.0360252829809347 0.8584208234846841 1.0346863130593769 0.8781262306805765 1.077051894638524 0.9719340357904048 1.0757772976042481 0.9490784327789453 1.0 12.199546610136439 -7.767933129299277 24.999420084478174 1.0337018903013468 0.9389772788927758 0.20128885783563155 0.07881461190023381 148.15373375758952 570357.0541289835 0.011020877044155126 0.01542038306002924 1.7063451040808942e-08 7.767933129299277 -0.09472461140857102 ISDYFEYQGGNGSS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 ISDYFEYQGGNGSSPVR 17 0 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;C9JWT6 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.081)S(0.919)PVR 245.97 1.3883999999999998e-74 49082000.0 3595.6 3716.2 3212.4 3440.6 4532.4 3620.2 3964.3 3885.7 5084.1 3987.5 3882.6 True False 3960.622665059181 4029.3772160050326 3430.412781730469 3653.1180478304577 4214.05985993116 3590.718291473486 4115.163605848198 3808.196665227322 4870.432957434002 3735.728569488994 3405.064813829241 1.1631563220099694 1.1833481699497248 1.0074441954227362 1.0728483149553512 1.2375857994879533 1.0545227441457903 1.2085419311652985 1.118391829066164 1.4303495597656037 1.0971093866750505 1.0 11.733466544191678 -7.794616328093705 24.465782640379018 1.2010337793204655 1.1208155572310783 0.016813866801189126 0.11660877933455092 386.7352983490535 285189.80999043764 0.025299942499386028 0.03495818979439075 1.604662383147977e-08 7.794616328093705 -0.08021822208938723 ISEAVKR ddPTM_A549_PD325901_60min_R1 2 ISEAVKR 7 1 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 81.78399999999999 0.015415 17464900.0 6219.5 6352.799999999999 7191.799999999999 7066.9 7308.5 8555.5 7388.2 8691.7 8381.3 8269.0 8540.900000000001 False True 6850.899061446091 6888.172751153536 7679.878795806625 7503.406362905618 6795.176172956239 8485.826844566987 7669.361993978168 8518.337224993262 8029.063107755865 7746.893928803627 7490.423445225926 0.9146210640217622 0.9195972432698396 1.0252930093960775 1.0017332688565113 0.9071818466133836 1.132890137202522 1.023888976379071 1.1372303965568842 1.0719104422425203 1.0342397843664184 1.0 12.870831563434175 -7.248147025494639 24.994783862027973 1.0486986652476917 0.958439047516649 0.5134158708711616 0.05313862630007755 665.0060487810507 1250469.3827526513 0.008448630623249465 0.014579556141261968 5.647457541459752e-08 7.248147025494639 -0.09025961773104274 ISEEDELDTKLT(ph)RIPSAK ddPTM_A549_PD325901_60min_R1 2 ISEEDELDTKLTRIPSAK 18 2 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 ISEEDELDT(0.081)KLT(0.917)RIPS(0.002)AK;ISEEDELDT(0.03)KLT(0.965)RIPS(0.006)AK 80.98 8.7806e-05 6059800.0 1799.95 1739.5 1992.46 1740.8400000000001 1859.98 2398.6000000000004 1860.73 1986.33 2223.14 2205.99 2559.2 True False 1982.6795989468426 1886.0937697757813 2127.680317235304 1848.3677330655048 1729.3414213826575 2379.066596853296 1931.541098380526 1946.7110899042596 2129.7091569776007 2066.7034149233914 2244.4346241054445 0.8833759636625956 0.8403424851492453 0.9479805267588602 0.8235337813870169 0.7705020243447341 1.0599848047708278 0.8605913835206372 0.8673503202082139 0.948884469213012 0.9208124811151981 1.0 11.132136358704587 -9.071620988076779 0.43340513998691144 1.003824573333702 0.8660288801064187 0.12731214735545082 0.07438399996428514 0.8180164223526237 0.3855455505962324 0.0398970995332976 0.02875972073196683 8.479671183343884e-10 9.071620988076779 -0.13779569322728324 ISEGLPT(ph)PT(ph)KMTPR ddPTM_A549_PD325901_60min_R1 1 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IS(0.042)EGLPT(0.933)PT(0.822)KMT(0.202)PR 70.622 0.029289999999999997 7073200.0 2231.2 1996.6 2248.7 2197.3 2442.2 2154.6 2033.3 2222.0 2330.4 2254.8 2495.2 True False 2457.709781477374 2164.8604890683105 2401.3103045315984 2333.0222305696307 2270.668297132617 2137.0536519553525 2110.678344164453 2177.6804668747213 2232.461392184298 2112.431543193424 2188.3062183760176 1.1231105413123057 0.989285901072334 1.0973374221427086 1.0661315180564672 1.0376373644899306 0.9765788873649043 0.9645260459620804 0.9951443032003163 1.0201777856487786 0.9653272130995901 1.0 11.095598918963065 -7.005599778089148 4.204812877654167 1.002752602548761 1.0646129235755437 0.5121809592373961 0.03582712395120968 0.15146698376967435 6.389079249354467 0.004782536922541192 0.008916034758627537 9.871888054907689e-08 7.005599778089148 0.06186032102678274 ISEGLPT(ph)PTK ddPTM_A549_MK2206_60min_R1 1 ISEGLPTPTK 10 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IS(0.001)EGLPT(0.797)PT(0.202)K 51.841 0.025825 3048400.0 2110.4 2390.5 1690.0 1964.9 3096.9 2473.7 2281.3 2419.8 3368.8 3313.1 3505.2 True False 2466.583925673775 2512.166239348957 1929.6674123395478 2446.3005882077114 2641.350112438622 2735.4652920908347 2695.782680374498 2762.8140603267025 2605.7721788681606 2564.668408952118 2634.7621014014253 0.9361695024996007 0.953469855214913 0.7323877215757586 0.9284711461830001 1.0025004196901468 1.038220980420147 1.0231598059424856 1.0486009567456456 0.9889971384825047 0.9733965763314933 1.0 11.363456988223717 -6.6211694471430915 4.3388541105910505 1.004628952671405 0.8747855128924982 0.5319613171810702 0.05664384812108978 0.12621276372854265 4.271545602173722 0.007794365815999783 0.01674145087059377 2.392382146998713e-07 6.6211694471430915 -0.12984343977890678 ISEGLPT(ph)PTK ddPTM_A549_PD325901_60min_R1 1 ISEGLPTPTK 10 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IS(0.006)EGLPT(0.965)PT(0.029)K 45.433 0.048815 8596300.0 3746.5 5157.9 4039.8 5224.9 4366.7 4456.8 4371.8 4254.4 5858.2 4675.3 7096.3 True False 4126.841921972474 5592.5743346516265 4313.965121290856 5547.630206391141 4059.9980562971923 4420.50529844733 4538.171241340756 4169.542654487763 5612.000226439262 4380.100760108312 6223.500087152025 0.6631062688489466 0.8986220384566395 0.6931734652332907 0.8914003581109977 0.652365710523371 0.7102924779535473 0.7291991930247561 0.669967477480315 0.9017434157388122 0.7038002247562781 1.0 12.603510462795875 -8.942525548819107 3.653072728511841 0.9595462430379064 0.7435476735822216 0.0893888367361011 0.1122291366485969 0.11203029708168508 2.8779578222326307 0.014507986912692344 0.015022078069997 1.1414961503313293e-09 8.942525548819107 -0.21599856945568474 ISEGLPT(ph)PTKMT(ph)PR ddPTM_A549_MK2206_60min_R1 4 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IS(0.001)EGLPT(0.974)PT(0.276)KMT(0.748)PR;IS(0.001)EGLPT(0.803)PT(0.308)KMT(0.887)PR;IS(0.012)EGLPT(0.91)PT(0.196)KMT(0.882)PR;IS(0.043)EGLPT(0.899)PT(0.301)KMT(0.757)PR 72.184 0.00046491 180410000.0 11799.859999999999 11955.720000000001 11050.91 9748.890000000001 15986.399999999998 11904.199999999999 12156.900000000001 12047.379999999997 16823.4 15843.0 16415.850000000002 True False 13791.387889120997 12564.215080991049 12618.095209288302 12137.368487644304 13634.821737056021 13163.894542631573 14365.65136853756 13755.13300855388 13012.926761449367 12264.055296558627 12339.341390588435 1.117676175135253 1.0182241242287153 1.0225906561684468 0.9836317922852689 1.1049878032757636 1.0668231087821307 1.1642154077603077 1.114738021515906 1.0545884378703303 0.9938986942943947 1.0 13.590977772587095 -9.977416081752185 1.0800227169220133 1.007730575360331 1.0700493798849036 0.24358848738968475 0.04989133288495279 0.5493706694904851 1.2945170276576938 0.017849428216391707 0.010004478942412189 1.0533772103922358e-10 9.977416081752185 0.06231880452457261 ISEGLPT(ph)PTKMT(ph)PR ddPTM_A549_PD325901_60min_R1 5 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IS(0.003)EGLPT(0.804)PT(0.304)KMT(0.889)PR;IS(0.003)EGLPT(0.961)PT(0.361)KMT(0.676)PR;IS(0.001)EGLPT(0.992)PT(0.017)KMT(0.99)PR;IS(0.012)EGLPT(0.978)PT(0.033)KMT(0.978)PR;IS(0.031)EGLPT(0.96)PT(0.013)KMT(0.996)PR 97.32 1.1451e-05 299530200.0 28855.0 29810.2 29370.399999999998 29534.7 33251.100000000006 29306.699999999997 30859.0 30200.1 29941.3 31122.799999999996 35075.8 True False 31784.33835807173 32322.410172906013 31363.651962562748 31358.991340829598 30915.657446067627 29068.03595180542 32033.356131692755 29597.735313979865 28682.97128467549 29157.70109654972 30761.69896381592 1.033243917881737 1.0507355335258273 1.0195682624504872 1.0194167551576476 1.005004875785073 0.9449424749262807 1.041338977062764 0.9621619192358266 0.9324248091243081 0.9478573056334458 1.0 14.908847564870777 -6.753438541582983 0.8349508754988236 0.9696921364160573 1.0438230307731868 0.485258147295773 0.02882102850547774 0.5106099185836349 0.6449054378845206 0.005606812996013436 0.021675382410844053 1.7642554123022803e-07 6.753438541582983 0.0741308943571295 ISEGLPTPTKMT(ph)PR ddPTM_A549_MK2206_60min_R1 1 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ISEGLPT(0.042)PT(0.216)KMT(0.742)PR 43.45399999999999 0.019729 28566000.0 1850.5 1851.8 1677.8 1651.9 1962.8 1331.6 1435.0 1809.9 2170.7 2611.2 2443.7 True False 2162.819159618707 1946.0487103226922 1915.7372688895227 2056.6155741566085 1674.074720105438 1472.509028155458 1695.7209250591332 2066.4588675862874 1679.0399158956047 2021.3281064428395 1836.8618473110419 1.1774533630740003 1.059442065918832 1.042940312410509 1.1196354136089555 0.9113775881164358 0.8016438635878059 0.9231619283407062 1.1249941690559633 0.9140806742507769 1.1004246777741262 1.0 10.84302740828374 -6.757558538730326 24.99197991059948 0.953592012645598 1.0929140050649317 0.31694702503310634 0.09141730660357049 80.82479500215744 520490.18298443913 0.011969298388944729 0.024199439297718325 1.747597687136993e-07 6.757558538730326 0.13932199241933374 ISEGLPTPTKMT(ph)PR ddPTM_A549_PD325901_60min_R1 4 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ISEGLPT(0.125)PT(0.125)KMT(0.75)PR;ISEGLPT(0.008)PT(0.132)KMT(0.861)PR;ISEGLPTPT(0.005)KMT(0.995)PR;ISEGLPT(0.001)PT(0.024)KMT(0.975)PR 95.40899999999999 1.9853e-05 175421000.0 11636.199999999999 10865.199999999999 10764.199999999999 11656.0 12873.6 12214.7 10719.4 12639.6 12446.4 12036.1 12955.400000000001 True False 12817.498457882304 11780.848535422714 11494.72334239295 12375.964647303328 11969.402747509 12115.227532970877 11127.33263288075 12387.493262425623 11923.321091521902 11276.138591906321 11361.967931047073 1.1281054950751912 1.0368669060604396 1.0116841916956232 1.0892448141387079 1.0534621132666715 1.0662965787700818 0.9793490617479063 1.0902594812449926 1.0494063320616236 0.9924459090483596 1.0 13.471925115666277 ISEIEDAAFLAR ddPTM_A549_PD325901_60min_R1 1 ISEIEDAAFLAR 12 0 B0QZ43;E5RHW4;O94905;O75477 B0QZ43 ERLIN1;ERLIN2 Erlin-2;Erlin-1 0 66.435 0.014747999999999999 568900.0 276.07 238.47 321.82 431.66 432.79 547.79 391.12 527.99 522.02 465.91 588.49 False True 304.0964231680074 258.56670381053783 343.6606404608705 458.3226578290114 402.3923234444457 543.3289798591956 406.0042856290764 517.4588252498579 500.08131477345 436.49236308730224 516.109460745472 0.5892091625849456 0.5009919861516631 0.6658677404682425 0.8880338236137099 0.7796646914071823 1.0527398181664942 0.7866631335194689 1.0026144928683092 0.968944289552703 0.8457360236272935 1.0 9.011533266522392 -6.208523486779288 0.7376385503298345 0.9801673319669186 0.46164285875505795 0.7140774982724455 0.09241688057839538 0.3146489609419006 0.23626055209795602 0.012665587872706368 0.1035570386085812 6.186948674395673e-07 6.208523486779288 -0.5185244732118607 down ISEKDS(ph)TPYCAK ddPTM_A549_PD325901_60min_R1 1 ISEKDSTPYCAK 12 1 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 IS(0.004)EKDS(0.492)T(0.492)PY(0.012)CAK 58.21 0.0035135999999999995 6565000.0 5621.7 5183.1 6137.5 4687.4 5707.8 5615.2 5514.5 6023.1 4587.0 5967.1 6120.6 True False 6192.41084552319 5619.898027091034 6554.027657785692 4976.930052142212 5306.903818841025 5569.471672913627 5724.357315150184 5902.964545469457 4394.224341722183 5590.336287648344 5367.805001680127 1.1536206780210831 1.0469638940557642 1.220988403217754 0.9271816041351034 0.9886543600559186 1.0375696716200342 1.0664242298962903 1.0996980224918425 0.8186259263044742 1.041456663552153 1.0 12.390116547813658 -8.746722706348478 24.998856263975508 0.914351126923804 1.0637028368723416 0.20552392870476266 0.09146056468819766 197.17524009613373 334936.60942010535 0.01612886275167555 0.018250531788627636 1.7917495070250991e-09 8.746722706348478 0.14935170994853753 ISEKDST(ph)PYCAK ddPTM_A549_PD325901_60min_R1 1 ISEKDSTPYCAK 12 1 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 IS(0.013)EKDS(0.094)T(0.858)PY(0.035)CAK 66.24600000000001 0.0021506999999999997 8533700.0 3414.2 3696.9 4292.1 3542.9 3710.0 3424.3 3934.5 4371.5 3350.4 4007.1 4454.6 True False 3760.8070705988025 4008.4507372716794 4583.387716494008 3761.736886490301 3449.4223988051813 3396.4136361230485 4084.2295505410125 4284.307003124592 3209.5943393298444 3754.091022144034 3906.71244003599 0.9626526467773904 1.026041921128639 1.1732083655616548 0.962890651469512 0.8829476066514391 0.8693789697231362 1.0454390010090908 1.0966527659468899 0.8215588909073319 0.9609335418885988 1.0 11.931739352161678 -6.503050476357335 23.693925925834872 0.9320115514711901 1.0539875051925789 0.17185296106077075 0.08908522643519197 452.59315565007597 540827.8494894414 0.014196610153811885 0.032540018328496796 3.140143705984723e-07 6.503050476357335 0.12197595372138881 ISEQFTAMFR ddPTM_A549_MK2206_60min_R1 4 ISEQFTAMFR 10 0 A0A0B4J269;Q13509;Q13509-2;Q5JP53;P07437;Q5ST81;P68371;P04350;Q9BVA1;Q13885 A0A0B4J269;Q5JP53;P68371;Q9BVA1 TUBB3;TUBB;TUBB4B;TUBB4A;TUBB2B;TUBB2A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ;;; 79.20100000000001 0.0010600999999999998 16037600.0 6183.999999999999 6704.299999999999 6699.7 6880.1 8685.9 7198.5 6387.200000000001 6534.9 10094.699999999999 9578.800000000001 9802.3 False True 7227.708015715796 7045.520233619407 7649.8182026338845 8565.724808859426 7408.21561614215 7960.2404920224235 7547.671562744044 7461.242087291911 7808.266567923421 7414.942427234479 7368.118380282776 0.9809435248838128 0.9562170244812234 1.038232260641325 1.1625389776284631 1.0054419912642385 1.0803627305071777 1.0243689329071797 1.012638736540707 1.0597368507024112 1.0063549531284681 1.0 12.847080525417464 -3.786971945856643 16.550473232051072 1.0314323770593976 1.0033545201360978 0.0 0.05337043797266789 0.0 0.0 0.006933032271830702 0.0 0.00016331574416436612 3.786971945856643 -0.028077856923299782 ISEQFTAMFR ddPTM_A549_PD325901_60min_R1 2 ISEQFTAMFR 10 0 A0A0B4J269;Q13509;Q13509-2;Q5JP53;P07437;Q5ST81;P68371;P04350;Q9BVA1;Q13885 A0A0B4J269;Q5JP53;P68371;Q9BVA1 TUBB3;TUBB;TUBB4B;TUBB4A;TUBB2B;TUBB2A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 ; 73.985 0.00099965 19021800.0 8993.5 8978.2 8758.5 9985.8 14146.3 14676.9 9915.2 11187.400000000001 15634.599999999999 10253.3 11592.3 False True 9906.513499335224 9734.82442299564 9352.904479139059 10602.600186602745 13152.712690085642 14557.376192510688 10292.528361805626 10964.258530654484 14977.532132786051 9605.904888160876 10166.520589644231 0.9744251646355928 0.9575374718575475 0.9199710359772513 1.042893691417171 1.2937280335106183 1.4318936418954433 1.0123943851832404 1.0784671544188718 1.4732210494947886 0.9448566796732397 1.0 13.311538392378255 -6.590927565308104 4.638583293956751 1.220590421093082 0.9548930546918297 0.24109917374929812 0.16629666531690665 0.20723838461154961 8.683255583414157 0.027468161373919834 0.05906851835536714 2.5649117948951334e-07 6.590927565308104 -0.2656973664012523 ISES(ph)PEPGQR ddPTM_A549_MK2206_60min_R1 2 ISESPEPGQR 10 0 H7C4B6;O14867 H7C4B6 BACH1 Transcription regulator protein BACH1 1 IS(0.094)ES(0.906)PEPGQR;IS(0.042)ES(0.958)PEPGQR 107.03 0.00027721 28596000.0 2990.2 2992.1000000000004 3225.3 2589.6 4343.700000000001 2624.8 3011.1 3159.0 4819.5 4279.4 4675.5 True False 3494.8726566289442 3144.3851097075963 3682.6960384726285 3224.052116251561 3704.7474840645946 2902.5545937987717 3558.1778936902847 3606.7979240317586 3727.8909451600284 3312.6805678276223 3514.4443127645686 0.9944310808782658 0.8947033527568196 1.0478743467628622 0.9173718031444419 1.0541488651872613 0.8258928967110405 1.0124439533063234 1.0262782969506044 1.0607341057077544 0.9425901431403724 1.0 11.77908087990727 -7.978663770335072 24.999889368860277 1.0288279050882772 0.9564875981080876 0.10123016741460455 0.06810672711539628 252.24408791085503 295556.297756762 0.009116468299023506 0.012595781749853775 1.0503552963061837e-08 7.978663770335072 -0.07234030698018956 ISES(ph)PEPGQR ddPTM_A549_PD325901_60min_R1 2 ISESPEPGQR 10 0 H7C4B6;O14867 H7C4B6 BACH1 Transcription regulator protein BACH1 1 IS(0.123)ES(0.877)PEPGQR;IS(0.072)ES(0.928)PEPGQR 93.928 0.00058888 36578000.0 5687.0 6577.799999999999 6984.700000000001 5974.4 6874.5 6724.6 6313.5 6334.9 7347.8 6831.6 7975.799999999999 True False 6264.340053451875 7132.134290791107 7458.72374441315 6343.425119153144 6391.658835737521 6669.837087134021 6553.763697379761 6208.545449867089 7038.9975186628035 6400.251610111847 6994.827162761879 0.8955675254995759 1.0196298099773222 1.0663199491362563 0.9068737470631753 0.9137693737115588 0.9535385123798347 0.9369443368479221 0.8875909733580423 1.0063147172722255 0.9149978207016533 1.0 12.77207269451717 ISES(ph)PEVTR ddPTM_A549_MK2206_60min_R1 2 ISESPEVTR 9 0 M0R0J1;Q9H4M7-2;Q9H4M7 M0R0J1 PLEKHA4 Pleckstrin homology domain-containing family A member 4 1 IS(0.006)ES(0.993)PEVT(0.001)R;IS(0.079)ES(0.737)PEVT(0.184)R 81.017 0.0016267 6597800.0 1320.77 1272.87 1082.85 1068.6399999999999 1436.89 1276.89 802.22 1022.67 1803.57 1719.81 2011.38 True False 1543.6836862737637 1337.6536461326514 1236.41441269342 1330.4568479730724 1225.5253844366732 1412.0096522690167 947.9729898961248 1167.636604295524 1395.0642747094662 1331.3037265400806 1511.8988347360494 1.0210231338284372 0.8847507620218399 0.8177891167627469 0.8799906563889551 0.810586896609804 0.9339313053412919 0.6270082151770584 0.7722981045219024 0.92272329514231 0.8805507987394556 1.0 10.562145892800782 -9.081008184638309 2.743682780952365 0.9707975879776791 0.8403952567448331 0.12016302629591769 0.09870911832298712 0.2474476278049675 3.855888051546241 0.01843519280733291 0.018080485454886126 8.29835128438484e-10 9.081008184638309 -0.13040233123284606 ISES(ph)PEVTR ddPTM_A549_PD325901_60min_R1 2 ISESPEVTR 9 0 M0R0J1;Q9H4M7-2;Q9H4M7 M0R0J1 PLEKHA4 Pleckstrin homology domain-containing family A member 4 1 IS(0.044)ES(0.952)PEVT(0.003)R;IS(0.15)ES(0.848)PEVT(0.001)R 81.017 0.0016267 8212100.0 1729.82 1542.8400000000001 1393.0900000000001 1529.49 1586.9299999999998 1379.53 1801.42 1655.3400000000001 1462.49 1809.0700000000002 1729.4 True False 1905.430052973821 1672.860541397452 1487.6334647307006 1623.9631235761801 1475.4695114112956 1368.2955650617146 1869.974023874849 1622.322945110891 1401.0266312459719 1694.8450114621833 1516.694763569847 1.2563042338782835 1.102964539456863 0.9808390590267847 1.0707250810003823 0.9728190185996821 0.9021561872087928 1.2329270653466806 1.0696436646833452 0.9237367101791616 1.1174595259187312 1.0 10.566715055551663 -2.0000002608382936 0.7452928878945652 0.9880315165956823 48.01242456466612 0.23866191763599431 0.09654094424151331 251.47715366595756 1.0345911971969652 0.014533017243281047 19863.55535082461 0.009999993993978138 2.0000002608382936 47.024393048070436 ISFPGSSES(ph)PLSSK ddPTM_A549_MK2206_60min_R1 1 ISFPGSSESPLSSK 14 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ISFPGSS(0.015)ES(0.953)PLS(0.027)S(0.005)K 157.86 5.0021e-19 4161900.0 2113.2 3197.8 2329.9 2181.2 2968.9 2061.0 2468.2 2246.3 3765.9 3382.8 3518.4 True False 2469.856497220348 3360.5543610918576 2660.3148544437363 2715.594097917789 2532.1787428780476 2279.0936520189225 2916.6399911017115 2564.7199040052346 2912.9296629065543 2618.6231305433653 2644.684177099959 0.9338946852734155 1.2706826736404078 1.0059102245474607 1.026812245269901 0.9574597847273848 0.861764013923989 1.102831111690609 0.9697641503711004 1.1014281735903684 0.9901458757222305 1.0 11.36887973352835 ISFPGSSES(ph)PLSSK ddPTM_A549_PD325901_60min_R1 2 ISFPGSSESPLSSK 14 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ISFPGSS(0.021)ES(0.977)PLS(0.002)SK;ISFPGSS(0.001)ES(0.993)PLS(0.005)S(0.001)K 237.46 2.4247999999999998e-57 15280600.0 5162.0 5371.2 5375.4 5603.7 5999.7 6152.6 5931.7 6171.700000000001 6278.0 6066.9 6718.5 True False 5686.042439936446 5823.849874228038 5740.206968906102 5949.827822073922 5578.301769841356 6102.495265488033 6157.434089450786 6048.600601895013 6014.157492333088 5683.834898616366 5892.167092080503 0.9650171746790577 0.9884054174321892 0.974209807563223 1.0097859970860161 0.946731768238378 1.035696233681191 1.0450202774674908 1.0265494014969074 1.0207038256631502 0.9646425177344088 1.0 12.524582628053128 -7.273936508101107 24.989622847772953 1.0159590889008192 0.9791584274845218 0.3810231861595995 0.024413792607439765 550.1717702055598 1100138.2329209545 0.003028460629926468 0.004861426222603326 5.3218605678645284e-08 7.273936508101107 -0.03680066141629745 ISFPPSCPDAVVATPPGAS(ph)PPVKDR ddPTM_A549_MK2206_60min_R1 5 ISFPPSCPDAVVATPPGASPPVKDR 25 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 ISFPPSCPDAVVAT(0.32)PPGAS(0.68)PPVKDR;ISFPPSCPDAVVAT(0.043)PPGAS(0.957)PPVKDR;ISFPPSCPDAVVAT(0.007)PPGAS(0.993)PPVKDR;ISFPPSCPDAVVAT(0.004)PPGAS(0.996)PPVKDR;ISFPPSCPDAVVAT(0.021)PPGAS(0.979)PPVKDR 98.929 8.9997e-10 14707000.0 3568.2 4398.7 4140.299999999999 4587.0 5728.2 4044.9 4142.4 4801.5 6465.9 5381.4 6219.6 True False 4170.424925885693 4622.575041633233 4727.456797224511 5710.815205918256 4885.589368100658 4472.928633212687 4895.020459905891 5482.127328977046 5001.383973920577 4165.73800245538 4675.101667772541 0.8920501033451744 0.9887646023825757 1.0111987146317858 1.2215381849950617 1.0450231278988216 0.9567553715561912 1.0470404298690108 1.1726220558512503 1.0697914888989983 0.8910475746809058 1.0 12.190782023779239 -5.4390040203238526 2.1463047938017903 1.0510523368049207 0.880747224180098 0.21859506458508027 0.08664302593186145 0.4614246056860156 3.080294115898871 0.010517371042916829 0.12963233371046082 3.6391166733117317e-06 5.4390040203238526 -0.17030511262482273 ISFPPSCPDAVVATPPGAS(ph)PPVKDR ddPTM_A549_PD325901_60min_R1 6 ISFPPSCPDAVVATPPGASPPVKDR 25 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 ISFPPSCPDAVVAT(0.002)PPGAS(0.998)PPVKDR;ISFPPS(0.001)CPDAVVAT(0.093)PPGAS(0.906)PPVKDR;ISFPPSCPDAVVAT(0.06)PPGAS(0.94)PPVKDR;ISFPPSCPDAVVATPPGAS(1)PPVKDR;ISFPPSCPDAVVAT(0.038)PPGAS(0.962)PPVKDR;ISFPPSCPDAVVAT(0.016)PPGAS(0.984)PPVKDR 107.75 1.3348e-12 52217600.0 27006.8 25729.7 26308.4 28723.819999999996 32781.200000000004 32492.9 28690.300000000003 32556.099999999995 30874.6 29238.600000000002 32929.0 True False 29748.510454644653 27898.03211739 28093.846229260944 30498.025124871692 30478.761601000653 32228.28859538665 29782.125066434568 31906.743045733638 29577.04793131365 27392.469806109297 28878.941754129486 1.0301108228936686 0.9660337402564545 0.9728142557454938 1.0560644979489489 1.055397453981928 1.115978863414489 1.0312748063968076 1.1048446067512567 1.0241735373521552 0.9485274785802138 1.0 14.817730256329869 -4.860739794678257 19.74848448179341 1.0253767850325575 3.7001343211834206 0.0 0.051555174115826316 15994.865228743633 1843756.3958681913 0.006715419416471472 363422.89180115866 1.3780348641575167e-05 4.860739794678257 2.674757536150863 ISGDLS(ph)SEEER ddPTM_A549_MK2206_60min_R1 1 ISGDLSSEEER 11 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H0Y5I9;H0Y463;H0Y500;H0Y4A7;H0Y4R9 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 IS(0.012)GDLS(0.747)S(0.241)EEER 54.343 0.019111000000000003 1545300.0 514.26 572.21 623.64 380.34 689.94 324.74 385.42 645.11 825.41 723.66 923.07 True False 601.0545155501306 601.3330448934811 712.0815296043994 473.5233170741112 588.4507399579917 359.103771255034 455.4458250427119 736.5563180665168 638.4559529089194 560.1847033963027 693.8462435640237 0.866264710842481 0.8666661388907468 1.0262814509835898 0.6824614552091577 0.848099626417727 0.5175552575026635 0.6564074234995643 1.061555531789158 0.920169214478145 0.8073614415188693 1.0 9.438472186549514 -8.267601225245668 24.980109535641756 0.9686928109145914 0.7820104657391865 0.24540635360753327 0.13879682289934914 467.08663859970574 1893565.1926152383 0.02217585065681138 0.02715122548678346 5.400062355813496e-09 8.267601225245668 -0.18668234517540483 ISGDLS(ph)SEEER ddPTM_A549_PD325901_60min_R1 2 ISGDLSSEEER 11 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H0Y5I9;H0Y463;H0Y500;H0Y4A7;H0Y4R9 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 ISGDLS(0.911)S(0.089)EEER;IS(0.001)GDLS(0.772)S(0.226)EEER 73.848 0.0014609999999999998 4958500.0 957.5 1292.42 1026.95 1258.35 1157.07 977.71 1179.33 1104.1100000000001 1324.95 1193.4099999999999 1442.56 True False 1054.7046951257546 1401.3367691483843 1096.645002552019 1336.0754215798 1075.801394874801 969.7478539187173 1224.210048504138 1082.087659892461 1269.2669591377378 1118.0578889313751 1265.1342651412738 0.8336701678125672 1.1076585369315732 0.8668210424524071 1.0560740139550362 0.8503456309079332 0.766517737001162 0.9676522739406115 0.8553144829822688 1.0032666050634576 0.883746428926676 1.0 10.30507478687377 -8.794510654677639 23.88911821195355 1.0015426183397833 0.9175743637953288 0.004701299610706644 0.10114488149259221 161.0639144739127 116344.0390395387 0.015594859431106148 0.01660269917557575 1.6050528803669766e-09 8.794510654677639 -0.08396825454445456 ISGEDRSS(ph)PGNR ddPTM_A549_MK2206_60min_R1 2 ISGEDRSSPGNR 12 1 Q06546 Q06546 GABPA GA-binding protein alpha chain 1 IS(0.002)GEDRS(0.391)S(0.607)PGNR;IS(0.017)GEDRS(0.31)S(0.673)PGNR 57.794 0.0037600000000000003 19177200.0 3295.9 3746.8 3245.4 3340.7 2855.8 2668.3999999999996 2999.3999999999996 2842.8 4370.9 6031.7 5465.9 True False 3852.1673429815196 3937.4961161232673 3705.6465207140614 4159.1716499697195 2435.7156030553833 2950.7683168594335 3544.3521551375384 3245.7756057098713 3380.8981288930318 4669.134780802417 4108.566178834319 0.9375940839961 0.9583625880015428 0.9019318076958484 1.0123170636501122 0.5928383521246928 0.7181990476533165 0.8626737408774419 0.790002026115778 0.8228900257978221 1.136438985662668 1.0 12.00441928986079 ISGEDRSS(ph)PGNR ddPTM_A549_PD325901_60min_R1 2 ISGEDRSSPGNR 12 1 Q06546 Q06546 GABPA GA-binding protein alpha chain 1 IS(0.003)GEDRS(0.18)S(0.817)PGNR;ISGEDRS(0.083)S(0.917)PGNR 95.195 7.2431e-05 25445000.0 6792.9 6406.200000000001 6708.5 6247.8 7351.6 7363.1 6765.8 7307.299999999999 7854.200000000001 9025.0 10095.7 True False 7482.510207331323 6946.072956560856 7163.77915148763 6633.712416216689 6835.248977643174 7303.137354828023 7023.276221387822 7161.550169034048 7524.1152877162385 8455.159959783865 8853.992901915182 0.8451000910236558 0.7845130477864254 0.8091015241200445 0.7492339885185326 0.7719962115809536 0.8248411124486333 0.7932326464671817 0.8088497752787844 0.8497991099686468 0.9549544542728234 1.0 13.112112501515996 -10.061051736872749 0.5034662809035101 1.0134675487362947 0.7894126701949911 0.8581369879336379 0.02758622354713803 0.2237855873647341 0.10605265809027177 0.02256637095146298 0.006893636416281375 8.688569174543897e-11 10.061051736872749 -0.22405487854130368 ISGLIY(ph)EETR ddPTM_A549_PD325901_60min_R1 2 ISGLIYEETR 10 0 P62805 P62805 HIST1H4A Histone H4 1 ISGLIY(0.999)EET(0.001)R;ISGLIY(1)EETR 90.906 0.00068952 2015170.0 1156.04 871.64 925.95 998.72 1548.17 1285.26 952.0799999999999 1222.9299999999998 1000.96 1060.53 1130.3600000000001 True False 1273.4003297683314 945.0961618208461 988.7905351896798 1060.4086661423114 1439.4318800965536 1274.7932686865943 988.3119253981664 1198.5377017799738 958.8931321321643 993.5679548088184 991.3328859424156 1.2845335283695012 0.953359033300288 0.997435421755106 1.0696797021257178 1.4520166742255811 1.285938645599057 0.9969526275309859 1.209016384683514 0.9672766290009512 1.002254609826928 1.0 9.953225780239665 -8.770412292212443 24.906349447417206 0.9845472830042089 1.1500726064416127 0.21115706206318596 0.14268134612560854 211.27682307921788 586444.6485999863 0.025457002333386925 0.027294801031156363 1.696632210417603e-09 8.770412292212443 0.16552532343740378 ISGLIYEETR ddPTM_A549_MK2206_60min_R1 2 ISGLIYEETR 10 0 P62805 P62805 HIST1H4A Histone H4 0 ; 133.23 2.5002000000000002e-06 164471000.0 4430.2 4099.3 4369.6 3649.5 5601.3 4151.8 3925.7000000000003 4443.8 6330.2 5297.1 5850.2 False True 5177.909452009079 4307.936860474032 4989.274985182773 4543.627663832281 4777.356189997244 4591.140720258207 4638.94887491613 5073.722258566739 4896.419807252207 4100.481431004276 4397.43388269389 1.1774843215691662 0.9796478981589527 1.1345878342408 1.0332452482602947 1.086396366025772 1.0440499715815286 1.0549218018200848 1.153791596170299 1.1134720698182812 0.9324714231956343 1.0 12.102446170983148 -10.881078768505814 1.167033626446459 1.0006495463667961 1.0851014635922784 0.35058354366308764 0.05892227415247615 0.5100977560985638 1.2488717305220844 0.033990992925413396 0.00845199950876132 1.3149863099340633e-11 10.881078768505814 0.08445191722548229 ISGLIYEETR ddPTM_A549_PD325901_60min_R1 2 ISGLIYEETR 10 0 P62805 P62805 HIST1H4A Histone H4 0 ; 173.37 3.7844000000000004e-10 238740000.0 32356.0 31435.0 31634.0 31854.0 37372.0 31774.0 32481.0 32117.0 35567.0 35043.0 33603.0 False True 35640.75730077174 34084.1377711421 33780.87347069531 33821.54923431712 34747.119646400846 31515.243078636115 33717.08222928521 31476.401239700903 34072.24267757421 32830.37899952421 29470.044026967505 1.209389346963904 1.1565689464173288 1.1462783509852597 1.1476585920050757 1.1790657528235922 1.0693992533501846 1.144113737951369 1.0680812424609007 1.1561653130343246 1.1140254479932816 1.0 14.846961595336786 -14.999999999998213 0.20873074196317096 0.3003447297830497 1.1660732585171927 0.23835191582534865 0.04950751149320849 19.428410539715202 0.23341092380114017 5.578483879687295 0.028125834367250607 1.0000000000041148e-15 14.999999999998213 0.865728528734143 ISGQLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 ISGQLSPR 8 0 Q66K64 Q66K64 DCAF15 DDB1- and CUL4-associated factor 15 1 IS(0.005)GQLS(0.995)PR;IS(0.007)GQLS(0.993)PR 74.165 0.0050761 42406000.0 3591.6000000000004 4817.3 4848.6 3736.7 6273.799999999999 4646.0 4527.5 4247.1 7288.6 6622.4 6647.799999999999 True False 4197.774273810622 5062.479993648073 5536.204387851794 4652.19166774684 5350.932330852607 5137.636636234798 5350.088145090751 4849.139431198257 5637.743737502514 5126.395240543448 4996.967790053747 0.8400643050303653 1.0131103914107122 1.1079127623898988 0.9310029328199454 1.0708358660032613 1.028150841088279 1.0706669263988202 0.9704163874840785 1.1282329553382762 1.0259011976717802 1.0 12.286837203300328 -5.284788623900009 3.6592261441456686 1.0489038973992355 0.8218676860939164 0.49429540472506706 0.05582816979824255 0.15602455252885197 3.823078658884108 0.008247470427372594 0.09251100652932236 5.190526063104579e-06 5.284788623900009 -0.22703621130531915 ISGQLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 ISGQLSPR 8 0 Q66K64 Q66K64 DCAF15 DDB1- and CUL4-associated factor 15 1 ISGQLS(1)PR;ISGQLS(1)PR 85.744 0.0029208000000000003 66581000.0 9446.6 10075.0 10765.7 8724.7 11850.9 9287.3 10126.7 11651.3 9779.2 11606.3 10411.0 True False 10405.611877780633 10924.05560821558 11496.32514141319 9263.604903768653 11018.533667385534 9211.667307994503 10512.077110042874 11418.90568123197 9368.214232084056 10873.476237256447 9130.513000766561 1.1396524901620555 1.1964339361105383 1.25911053852593 1.0145766073594022 1.2067814444227245 1.008888252743425 1.1513128680897033 1.2506313369548112 1.0260337213579935 1.1908943381761303 1.0 13.156480205426899 -8.88992185942292 8.490293853861598 1.011459748333197 1.1505382364605818 0.03322996899556219 0.09443375295054365 0.1770601456553013 12.731951521113178 0.012888136604236794 0.013695314749222103 1.2884813612697766e-09 8.88992185942292 0.13907848812738477 ISHEGS(ph)PVKPVAIR ddPTM_A549_MK2206_60min_R1 2 ISHEGSPVKPVAIR 14 1 Q96II8-3;Q96II8;Q96II8-2 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 ISHEGS(1)PVKPVAIR;ISHEGS(1)PVKPVAIR 102.65 1.1395e-05 40977000.0 1716.0500000000002 1982.7599999999998 1619.5900000000001 1756.98 2498.0 1941.16 1826.97 1691.81 2869.3 2770.4 2857.6000000000004 True False 2005.6772866056106 2083.6740149473053 1849.272215592312 2187.4401788738296 2130.5475090805903 2146.572262762278 2158.9068003172733 1931.6292484508283 2219.4081313305674 2144.564715873638 2147.9790542521732 0.9337508588061603 0.9700625389351126 0.8609358698966192 1.0183712799915523 0.991884676371925 0.9993450627523065 1.0050874546674313 0.899277506746141 1.0332540845484466 0.9984104414930042 1.0 11.068764209794606 -6.41568489382234 0.4882328071350175 1.0104160683868435 0.9121731728255132 0.16722404169864125 0.04659826750425288 1.8330720066622048 0.5577240486182417 0.010391214023413009 0.0849251371973664 3.839857486790301e-07 6.41568489382234 -0.09824289556133026 ISHEGS(ph)PVKPVAIR ddPTM_A549_PD325901_60min_R1 2 ISHEGSPVKPVAIR 14 1 Q96II8-3;Q96II8;Q96II8-2 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 IS(0.002)HEGS(0.998)PVKPVAIR;ISHEGS(1)PVKPVAIR 109.35 5.6367e-06 65035000.0 1831.74 1667.77 2101.61 1698.1599999999999 2039.5 1580.38 2143.23 2026.3000000000002 1948.02 2248.32 2351.7 True False 2017.6968963442837 1808.3188309393238 2244.2378926075753 1803.0514863988167 1896.2525558930372 1567.5099092533194 2224.7917904704573 1985.8838568984022 1866.1514938220282 2106.3606914993084 2062.455808654569 0.9782982441987528 0.8767794312737154 1.088138656445488 0.8742255125335398 0.9194148780962471 0.7600210887795338 1.0787100412695811 0.9628734097308402 0.9048201110497496 1.0212876720366584 1.0 11.010147492351246 -10.992609520310083 1.2154017916278945 1.0006862029786932 0.9345555887280397 0.08588476004253975 0.0885469687896047 1.1186245420966043 2.8893537281509794 0.06264852256611342 0.01370942741279854 1.0171628258828714e-11 10.992609520310083 -0.06613061425065347 ISHSLYSGIEGLDES(ph)PSR ddPTM_A549_PD325901_60min_R1 2 ISHSLYSGIEGLDESPSR 18 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 ISHSLYSGIEGLDES(0.871)PS(0.129)R;ISHSLYSGIEGLDES(0.798)PS(0.202)R 137.72 1.4163e-13 14043800.0 2058.26 2056.58 1706.43 2229.62 2332.1 2413.5 2300.0 2181.35 2218.7 2206.31 2058.03 True False 2267.213039989073 2229.8952141681366 1822.2386013971884 2367.3385635655836 2168.301341308237 2393.845256193374 2387.5277586082925 2137.84126301403 2125.455754737086 2067.003210068779 1804.905356927057 1.2561395705806526 1.2354637907245432 1.009603409067189 1.3116136834986725 1.2013379720917226 1.3262996018079403 1.3227994196178683 1.1844616975672417 1.1775995603203164 1.1452141809739858 1.0 10.817707473756915 -10.039536414252769 0.6874988491257068 1.0058557063383495 1.2305854209644302 0.2565779866451309 0.09294265725472178 0.43129285682024654 0.40399707174632304 0.04764575292852776 0.018629550617407876 9.129848811175353e-11 10.039536414252769 0.2247297146260807 ISHTPQTPLYT(ph)PER ddPTM_A549_PD325901_60min_R1 2 ISHTPQTPLYTPER 14 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 ISHT(0.001)PQT(0.023)PLYT(0.975)PER;ISHTPQT(0.01)PLYT(0.99)PER 86.455 9.3698e-05 14805600.0 2464.3 2625.7 2404.7 2490.2 2735.4 2526.9 2316.2 2692.6 2853.9 2984.0 2679.7 True False 2714.4739218782233 2846.9769538949513 2567.8974026358064 2644.013998345466 2543.2749406177063 2506.3217641910255 2404.3442584732725 2638.8939806961616 2733.960507704586 2795.589730747373 2350.1138880178805 1.1550393092513696 1.2114208457770241 1.0926693449744291 1.1250578160599123 1.0821922093157539 1.066468215421208 1.0230756350710861 1.1228791907280045 1.1633310715892355 1.1895550019940577 1.0 11.198514957068264 -10.94143163755106 1.1638466688777305 0.9990817857585437 1.1176791063214881 0.0 0.07367701980356708 0.40514543938128605 0.9628896558268929 0.039034960533288095 0.008849720818032864 1.1443750021163639e-11 10.94143163755106 0.11859732056294447 ISICS(ph)SDKR ddPTM_A549_MK2206_60min_R1 3 ISICSSDKR 9 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IS(0.012)ICS(0.886)S(0.102)DKR;ISICS(0.969)S(0.031)DKR;IS(0.002)ICS(0.499)S(0.499)DKR 91.31299999999999 0.00043369 48486600.0 4811.3 4949.12 4709.3 4456.16 6459.5 5573.1 5526.3 5175.8 8153.300000000001 8090.299999999999 8080.5 True False 5623.329815008643 5201.00906859933 5377.149553213389 5547.919400044622 5509.316106847909 6162.8417428756275 6530.3571764141425 5909.485500222725 6306.590568144677 6262.6956110426245 6073.888839545311 0.9258203374412765 0.856289801475635 0.8852894241666628 0.9134048295259775 0.9070492154842159 1.0146451319212775 1.0751525668196131 0.9729327711346635 1.0383118187946268 1.031084989614569 1.0 12.568404790120997 -7.240298493537697 4.319105642209737 1.0195623560229625 0.8940422120405899 0.8241070969683504 0.028655633837590573 0.06542839518319145 3.004069249892366 0.00426036431354316 0.007325690769416689 5.750445694574235e-08 7.240298493537697 -0.12552014398237266 ISICS(ph)SDKR ddPTM_A549_PD325901_60min_R1 3 ISICSSDKR 9 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 ISICS(0.972)S(0.028)DKR;IS(0.001)ICS(0.499)S(0.499)DKR;IS(0.015)ICS(0.963)S(0.022)DKR 69.721 0.0016233 66939200.0 5376.6 6091.1 6541.1 6005.8 6447.0 6597.4 6374.4 7084.0 5819.0 6263.299999999999 6897.0 True False 5922.4284739562745 6604.418373717309 6985.018380829649 6376.764625838563 5994.184960942589 6543.672961761 6616.981280205519 6942.704062709507 5574.447666117589 5867.834169098533 6048.71272368523 0.9791221280464423 1.091871721375703 1.1547942016617987 1.0542349946408869 0.9909852285546437 1.0818290206009669 1.0939486767647426 1.1477986110207603 0.9215923983775027 0.9700963555636519 1.0 12.56241242791561 -8.771430799930584 24.999760094244436 0.9629741860854255 1.0750472559001036 0.4525672733884136 0.05408240762125343 136.81573246613925 342328.9026197991 0.010029485411471752 0.010738862395140812 1.6926579294536967e-09 8.771430799930584 0.11207306981467813 ISINQT(ph)PGK ddPTM_A549_MK2206_60min_R1 2 ISINQTPGK 9 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 IS(0.001)INQT(0.999)PGK;ISINQT(1)PGK 141.71 4.1278e-05 121029000.0 6125.2 7157.299999999999 7160.299999999999 7113.6 9049.4 6994.4 6746.200000000001 6671.0 10765.3 8634.8 8923.9 True False 7158.984013237775 7521.575998699968 8175.738208624173 8856.432319341642 7718.245247667688 7734.542765493042 7971.897215772776 7616.634679080682 8326.976738651565 6684.192682870951 6707.849342889475 1.067254741018672 1.1213096201501704 1.2188315197166295 1.3203087706091268 1.1506288905920738 1.1530585095343402 1.1884430923039782 1.1354808806423995 1.2413780204348825 0.9964732869196591 1.0 12.71163457125262 -10.894041787125849 1.0638858808669998 0.9966119057375972 1.1835508477552812 0.5330837815143976 0.06424525475718808 0.35685431878737484 0.6954708772180376 0.051245278666344915 0.011378902181670527 1.2763159978032293e-11 10.894041787125849 0.18693894201768402 ISINQT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 ISINQTPGK 9 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 IS(0.001)INQT(0.999)PGK;ISINQT(1)PGK 147.19 1.4857e-13 101650000.0 3228.5 4032.8 3436.8 2938.1 4616.1 4628.0 4029.3 3871.0 3884.2 4055.9 4292.0 True False 3556.254943303919 4372.658209112834 3670.0419151572914 3119.579764090762 4291.881060680483 4590.311102408508 4182.637216417562 3793.7898682592477 3720.9605816693497 3799.809781815778 3764.111209229667 0.9447794567237863 1.1616708343767843 0.9750088961660548 0.8287692872733137 1.14021101453026 1.2194940179113158 1.111188534005494 1.0078846392627316 0.9885363037482763 1.0094839314254525 1.0 11.878093537232797 -4.297310594499269 16.23759496870011 1.0206603048771197 1.0334336241813575 0.0 0.10800572071919436 0.0 0.0 0.014219919978052206 0.0 5.0430050783854725e-05 4.297310594499269 0.012773319304237862 ISIVRPFS(ph)IETK ddPTM_A549_MK2206_60min_R1 1 ISIVRPFSIETK 12 1 E5RFM9;R4GMT7;O75410-7;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 IS(0.002)IVRPFS(0.991)IET(0.008)K 44.294 0.017324000000000003 5139800.0 929.53 1097.3 934.22 1133.8 1429.9 862.52 831.63 1012.7 1266.4 1121.8 1172.9 True False 1086.4119391733998 1153.1478830527542 1066.7064437608597 1411.5810508982163 1219.5636041770763 953.7912939055615 982.7264062069178 1156.2533262636798 979.5624220252428 868.384600876063 881.6365596067938 1.2322673411569218 1.3079628680179205 1.2099162995652157 1.601091782681716 1.3832951808634122 1.0818418128337923 1.1146615864537306 1.3114852301263051 1.1110728240014498 0.9849689097096416 1.0 9.78404024044174 -8.571747155537937 0.4909205391279919 1.0110925628906813 1.337093880713778 0.4572202292092059 0.12825076209126204 0.5518330446328973 0.3121316075276906 0.05025158471745998 0.05590813408805211 2.6807285797471305e-09 8.571747155537937 0.3260013178230967 ISIVRPFS(ph)IETK ddPTM_A549_PD325901_60min_R1 2 ISIVRPFSIETK 12 1 E5RFM9;R4GMT7;O75410-7;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 ISIVRPFS(0.969)IET(0.031)K;IS(0.001)IVRPFS(0.994)IET(0.004)K 78.069 0.00028411 19490400.0 2863.1 2816.4 3573.2 3130.8999999999996 3666.8999999999996 3673.6 3795.1 3424.8999999999996 3797.6000000000004 3755.8 4077.1 True False 3153.759804297181 3053.7479121566585 3815.6988393971224 3324.288582210191 3409.349594118251 3643.683419578199 3939.5246072584036 3356.587682717925 3638.000078509737 3518.658147031162 3575.642546866326 0.8820120476139649 0.8540417203707755 1.0671365466162663 0.9297038332658782 0.9534928476299138 1.0190289918021878 1.1017669008080748 0.9387369231467559 1.0174395317278178 0.9840631721185037 1.0 11.803986803722685 -5.748589904269126 24.99664364345759 1.004770653457668 0.8680268013503087 0.516129175724072 0.04966178137674407 122.2365378650726 237787.66501580845 0.006306574873274083 0.024109759587784572 1.78406262752778e-06 5.748589904269126 -0.13674385210735918 ISKLEVTEIVKPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 ISKLEVTEIVKPSPK 15 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 ISKLEVT(0.032)EIVKPS(0.968)PK;ISKLEVT(0.021)EIVKPS(0.979)PK 76.539 0.00012551 36113000.0 2650.0 2778.7 2994.7 2736.7 4374.8 2883.0 2954.0 2696.8 4842.4 3503.6000000000004 4089.1 True False 3097.255213720387 2920.1239612126933 3419.3934909664167 3407.1916228551313 3731.2727152625166 3188.0771464194822 3490.703562804657 3079.0796586036245 3745.60413172381 2712.134326644124 3073.6636165812433 1.0076753998101406 0.9500466952400834 1.1124813634517754 1.1085115509955714 1.2139495991473246 1.0372238293159413 1.1356817135009967 1.001762080272273 1.2186122487567292 0.8823783812949451 1.0 11.58574356899956 -5.767222493091202 24.982454245859874 1.1043496668227364 0.978861034603028 0.09325031447501586 0.09675835122990753 130.97285147755042 565800.796328224 0.01184011311844551 0.0382941064710148 1.7091394827514823e-06 5.767222493091202 -0.1254886322197084 ISKLEVTEIVKPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 ISKLEVTEIVKPSPK 15 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 ISKLEVT(0.002)EIVKPS(0.998)PK;ISKLEVTEIVKPS(1)PK 98.132 2.6468000000000002e-06 60658000.0 4859.700000000001 4374.4 5382.2 5515.5 5164.6 7009.1 6404.200000000001 6239.799999999999 6910.3 6127.6 5876.299999999999 True False 5353.053166477943 4743.046039958134 5747.468457797824 5856.179908390655 4801.856312902756 6952.020213459696 6647.915335512712 6115.342293971596 6619.884122215563 5740.702290257241 5153.5523529348275 1.0387113198587192 0.9203449805369844 1.1152440228000742 1.1363384918474144 0.9317565795500673 1.3489763443463776 1.2899675564034738 1.186626597571877 1.284528354203231 1.1139311094779207 1.0 12.331351512148975 -5.89161531924841 5.268634431638648 1.1520037950023578 0.9810406665245531 0.24904557954417472 0.11952466691242662 0.2563579583917568 10.825271698593827 0.01943603738325133 0.06315595175919257 1.2834669231917342e-06 5.89161531924841 -0.1709631284778047 ISKPGAVS(ph)TPVK ddPTM_A549_PD325901_60min_R1 1 ISKPGAVSTPVK 12 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ISKPGAVS(0.5)T(0.5)PVK 109.48 2.7249e-05 154580000.0 15484.0 14985.0 13956.0 11949.0 16958.0 13518.0 13260.0 13837.0 13852.0 13270.0 15251.0 True False 17055.924281281666 16247.838539862076 14903.138084245556 12687.062591852042 15766.928581924052 13407.913889878617 13764.616556150411 13561.010180083487 13269.84861162757 12432.129935327637 13375.223684054443 1.2751879657620417 1.214771350645319 1.1142346802029672 0.9485495638459635 1.1788160672573222 1.0024440866632494 1.0291129988771845 1.013890346839622 0.9921216216703354 0.9294894970727753 1.0 13.707275398553149 -2.0000000000000004 0.39760954810209875 0.9962333246594689 5.872884329075356 0.6965298701107007 0.060171483280559185 21.662591526026 0.25277346014354707 0.011694351069903497 83.64567734890905 0.00999999999999999 2.0000000000000004 4.876651004415887 ISKPGAVS(ph)TPVKHADDHTPK ddPTM_A549_PD325901_60min_R1 1 ISKPGAVSTPVKHADDHTPK 20 2 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ISKPGAVS(0.51)T(0.442)PVKHADDHT(0.048)PK 49.902 0.0078645 6366200.0 2005.1 2146.5 1931.5 1899.3 2131.8 2150.8 2105.3 2144.4 2103.1 2205.2 2124.1 True False 2208.656275923396 2327.393088142404 2062.583205053045 2016.6154473767347 1982.0697223107516 2133.284597895468 2185.418343564364 2101.6282597507447 2014.7140207272569 2065.9632956582145 1862.8491657792956 1.185633446065633 1.249372805322525 1.107219651994848 1.0825436027898228 1.0639990390642184 1.1451730161969607 1.1731590424553382 1.1281795103746681 1.0815228939292199 1.1090341255803977 1.0 10.86329514917686 -14.99999999999447 0.04746397743751255 0.38432598491668496 1.446627131616924 0.22334766760471159 0.056536633379657815 220.4300957137152 0.7999401194966776 17.585280812827527 4.433897506376491 1.0000000000127329e-15 14.99999999999447 1.062301146700239 ISKPGAVST(ph)PVK ddPTM_A549_MK2206_60min_R1 2 ISKPGAVSTPVK 12 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ISKPGAVS(0.093)T(0.907)PVK;ISKPGAVS(0.087)T(0.913)PVK 113.59 1.255e-05 168723000.0 18386.8 18937.5 20320.6 17715.8 26264.0 22144.2 18887.4 21525.9 28279.0 26282.0 27365.0 True False 21490.04232589962 19901.33786139756 23202.366638572177 22056.17179529249 22400.600391710428 24487.484545869702 22318.99609753442 24577.26224530398 21873.85165228352 20344.877946358272 20569.51526442145 1.0447520055599162 0.9675161327608133 1.1279977354986435 1.0722747479345063 1.0890193620875528 1.1904745557239775 1.0850521176908334 1.1948391553890736 1.0634111388185286 0.9890791146424472 1.0 14.328220175655597 -9.70343883010197 1.256201935452553 1.0130315045666192 1.0942616088219879 0.26658766138046075 0.06133244986462422 0.42544543271426666 1.3660349113167962 0.017070090139244307 0.011910443407144457 1.979525815627615e-10 9.70343883010197 0.0812301042553687 ISKPGAVST(ph)PVK ddPTM_A549_PD325901_60min_R1 1 ISKPGAVSTPVK 12 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ISKPGAVS(0.093)T(0.907)PVK 103.39 7.7455e-05 125270000.0 13019.0 13568.0 12446.0 11796.0 14603.0 12838.0 13373.0 13064.0 13418.0 11990.0 13208.0 True False 14340.67929591876 14711.422976900138 13290.660403877924 12524.61212934026 13577.335657615115 12733.451584425326 13881.916832986397 12803.428271490264 12854.088122351926 11232.949353773805 11583.499732410402 1.238026471032224 1.2700326599687197 1.14737866024125 1.081245946274479 1.1721272474868711 1.0992749927552017 1.1984216474875093 1.1053160588130826 1.1096895082913882 0.9697370926978343 1.0 13.499783581389533 -2.0000102868264578 0.02049145943265461 2.445210871091633e-07 2.6244817420285504 0.7212086128463362 0.046367312786060946 914.3408489599647 1.4042064073910792 65.69743114202124 122.45044407627783 0.009999763139872622 2.0000102868264578 2.6244814975074635 ISKSEETLLT(ph)PER ddPTM_A549_PD325901_60min_R1 1 ISKSEETLLTPER 13 1 Q6P4F7-3;Q6P4F7;H3BQ41 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 ISKSEET(0.036)LLT(0.963)PER 49.559 0.011927 5068600.0 1929.5 1921.5 1845.2 2054.2 1847.5 2147.9 2115.5 2650.5 1871.0 2520.8 2399.9 True False 2125.381419577175 2083.4315485048364 1970.4263680889871 2181.0832685733108 1717.737973528994 2130.408214533975 2196.0065101460186 2597.6336982229727 1792.3683765777641 2361.6362577975815 2104.727514219543 1.0098131017996839 0.9898818419150075 0.9361907205454306 1.036278213610982 0.8161331868015945 1.0122014370700876 1.0433685573594655 1.2341900225437044 0.851591649972987 1.122062709705823 1.0 11.039417753426411 ISKYS(ph)QTESQQIR ddPTM_A549_PD325901_60min_R1 1 ISKYSQTESQQIR 13 1 A0A2R8YDN7;Q9H7F0;A0A2R8Y635 A0A2R8YDN7 ATP13A3 Probable cation-transporting ATPase 13A3 1 IS(0.006)KY(0.001)S(0.987)QT(0.006)ESQQIR 49.537 0.0084112 6030300.0 2327.5 2166.9 2325.3 2238.4 2583.0 2355.2 2151.0 2682.2 2616.7 2526.5 2701.9 True False 2563.7860865850603 2349.512267736211 2483.108841164818 2376.6608842247565 2401.5789908662473 2336.020032064071 2232.857482072365 2628.701416854804 2506.7291988193674 2366.9763588248115 2369.583428755275 1.0819564550769156 0.9915296668707685 1.0479094388624997 1.0029867931146021 1.0135026105106497 0.9858357396140155 0.9422995852250998 1.1093517050107167 1.0578775865832815 0.9988997771089948 1.0 11.210417741215048 -11.255072484885664 1.769344959338751 0.9999899752273204 1.029115694443467 0.04509564792233156 0.0448914644176507 1.0204442225898827 5.773065340559999 0.03358659225844604 0.006843661533271748 5.558114831372919e-12 11.255072484885664 0.029125719216146595 ISLEQPPNGS(ph)DTPNPEK ddPTM_A549_PD325901_60min_R1 1 ISLEQPPNGSDTPNPEK 17 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 ISLEQPPNGS(0.93)DT(0.07)PNPEK 174.68 4.9273e-30 8932900.0 2552.8 2531.3 2677.4 2753.7 3043.7 2433.0 2351.5 2136.9 2525.5 2590.5 2745.0 True False 2811.958376727967 2744.621534598124 2859.104464514121 2923.789794893548 2829.9210121949673 2413.186454658579 2440.9876192901743 2094.2778531343806 2419.3620176628233 2426.9353879025043 2407.3824019886843 1.1680563812400853 1.1400854024399507 1.1876403441980299 1.2145099143693463 1.1755178611662334 1.0024109392280596 1.0139592352564053 0.8699398364814601 1.0049761997363789 1.0081220938965358 1.0 11.233249610368835 -7.2699651735949145 5.386585212945965 0.9919770449278501 1.1784339305401188 0.8442492374958763 0.041400458882003596 0.05346948929938029 5.428680356175199 0.006317208199311641 0.010532694615433984 5.370748630855415e-08 7.2699651735949145 0.1864568856122687 ISLEQPPNGSDT(ph)PNPEK ddPTM_A549_MK2206_60min_R1 1 ISLEQPPNGSDTPNPEK 17 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 ISLEQPPNGS(0.011)DT(0.989)PNPEK 94.007 4.0429e-06 3061400.0 1344.1 1304.5 1198.7 1077.2 2112.1 1751.9 1618.6 1676.6 2487.6 2344.2 1857.4 True False 1570.9512199100263 1370.8934780299983 1368.6936847168133 1341.1140483573452 1801.4128878819504 1937.2848951828964 1912.6786685022398 1914.2631843721583 1924.1625718809184 1814.6435918823931 1396.156318367856 1.125197228449684 0.9819054356553779 0.9803298289097403 0.9605758543750625 1.2902658994430152 1.3875845202259545 1.369960256841592 1.3710951697801168 1.378185627616767 1.2997424199632315 1.0 10.447244764253105 -6.760094587466931 24.997926612172833 1.2344749808107978 1.0075900002051623 0.5290248344473537 0.12094786756537494 36.89596790528373 685822.7650370091 0.024848466818291306 0.049577621376658505 1.737422384429736e-07 6.760094587466931 -0.22688498060563544 ISLEQPPNGSDT(ph)PNPEK ddPTM_A549_PD325901_60min_R1 2 ISLEQPPNGSDTPNPEK 17 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 ISLEQPPNGS(0.06)DT(0.94)PNPEK;ISLEQPPNGS(0.06)DT(0.94)PNPEK 137.81 1.3447e-12 10596800.0 3573.0 3869.5 3480.5 3486.6000000000004 4506.2 4315.3 3547.0 3813.3999999999996 4736.6 4612.9 3655.6 True False 3935.7283296964188 4195.5963450114305 3716.7076599467387 3701.9593633568784 4189.700057546063 4280.157627533156 3681.983025992874 3737.3387454455724 4537.537173970195 4321.640706757562 3205.9843747576824 1.2276193111496037 1.3086764795379098 1.159303111147464 1.154702871450109 1.3068373291316284 1.3350525539777975 1.1484719186353392 1.165738290826215 1.4153335274171932 1.3479918182958095 1.0 11.64655167880254 -11.060090935383684 1.3752879171623449 1.000287228636097 1.263340107835714 0.0 0.13186464304643236 0.2848391645730243 0.962865795849656 0.0687134315815078 0.015319571948573365 8.707812410655124e-12 11.060090935383684 0.26305287919961695 ISLPGQMAGT(ph)PITPLK ddPTM_A549_MK2206_60min_R1 2 ISLPGQMAGTPITPLK 16 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ISLPGQMAGT(0.995)PIT(0.005)PLK;ISLPGQMAGT(0.989)PIT(0.01)PLK 104.95 4.3763000000000003e-07 6088700.0 3021.3 3338.8999999999996 3688.3 3329.4 4186.700000000001 3402.2 3439.2 3385.5 4271.7 4489.4 4547.4 True False 3531.221576306944 3508.8357484050284 4211.356400551454 4145.103149462446 3570.8419760879538 3762.2185458024182 4064.058122274127 3865.4049926589164 3304.166770503183 3475.2414219762863 3418.1550781447118 1.0330782236549672 1.026529127025312 1.2320553937059144 1.2126726420242768 1.0446693887353165 1.1006576529712209 1.1889624751841263 1.1308454134728612 0.9666520959302413 1.016700922727754 1.0 11.739002136736127 -8.758806598828807 24.998175957770137 0.9842523737787211 1.1237985986564776 0.40944889892235303 0.06742892713752478 44.547132292709534 422973.41060686286 0.011780744659028104 0.013061483161108958 1.742582712187279e-09 8.758806598828807 0.13954622487775648 ISLPGQMAGT(ph)PITPLK ddPTM_A549_PD325901_60min_R1 2 ISLPGQMAGTPITPLK 16 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 IS(0.004)LPGQMAGT(0.994)PIT(0.003)PLK;ISLPGQMAGT(0.989)PIT(0.011)PLK 105.53 4.1513999999999994e-07 16633900.0 4725.1 4666.6 4589.7 5084.2 5842.1 5886.5 5123.3 4957.1 5121.8 5173.8 4500.5 True False 5204.7886735652255 5059.870759434123 4901.184642108189 5398.2394869440295 5431.771050150875 5838.562295662854 5318.269985077335 4858.226751730279 4906.548557539279 4847.125385033771 3946.967031020066 1.3186805546283178 1.2819642828702411 1.2417597115934136 1.3676930778793186 1.3761886044300382 1.4792528667648686 1.347432077156942 1.2308759393094562 1.2431187083595212 1.2280633070758296 1.0 11.946528753124797 -9.91639376034396 0.5674876700082517 0.9985006975272945 1.341475854807742 0.4061360003511816 0.08966296578807283 0.30331585490231733 0.19652636925397324 0.04734798346690348 0.018003801792129567 1.2122892097814004e-10 9.91639376034396 0.34297515728044736 ISLS(ph)KSPTKTDPK ddPTM_A549_MK2206_60min_R1 1 ISLSKSPTKTDPK 13 2 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 IS(0.009)LS(0.375)KS(0.277)PT(0.277)KT(0.061)DPK 77.222 0.00019154 275860000.0 12059.0 13483.0 13628.0 11886.0 16795.0 13428.0 13785.0 12482.0 16606.0 17297.0 16987.0 True False 14094.264385756285 14169.22710945073 15560.65532270021 14798.070533582812 14324.477748201973 14848.942047214985 16289.5560640698 14251.361724521817 12844.767514332903 13389.595686711773 12768.659082650358 1.1038171114543356 1.1096879490426226 1.218660097507304 1.158936928129748 1.121846675949365 1.1629210202182663 1.2757452414250392 1.1161204659216024 1.0059605657250228 1.0486297425627977 1.0 13.640319406047732 -8.674899338985632 3.973655639536602 1.002476623857849 1.1644162374244447 0.625026511076073 0.04893013144886956 0.08673587574764798 2.6147087855184026 0.00808446547849828 0.009092513031324204 2.1139789622661565e-09 8.674899338985632 0.16193961356659559 ISLSKS(ph)PTK ddPTM_A549_MK2206_60min_R1 4 ISLSKSPTK 9 1 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 IS(0.067)LS(0.227)KS(0.705)PT(0.002)K;ISLS(0.004)KS(0.498)PT(0.498)K;IS(0.01)LS(0.01)KS(0.98)PTK;ISLS(0.02)KS(0.49)PT(0.49)K 81.92 0.00058575 438583800.0 45215.399999999994 47990.6 45957.1 41092.5 55455.299999999996 45447.8 45488.2 47214.6 60016.9 58916.299999999996 61861.0 True False 52846.65410960481 50433.11655557413 52474.50783173364 51160.164344712415 47297.898831191684 50257.05603019198 53752.81713120206 53907.41413864824 46423.16797729533 45607.0669108526 46499.206423255055 1.1365065809633965 1.084601661725385 1.1285032986173766 1.1002373648924542 1.0171764739524067 1.080815349249865 1.1559942903524338 1.1593190139195195 0.9983647366953408 0.9808138766007782 1.0 15.50491847428616 -8.780647858753142 24.970396468513986 0.9992277726835055 1.1052263477986453 0.6389247118665635 0.038332317539192626 115.30554222451377 149892.78053940673 0.006884703692389131 0.007334952884985183 1.6571130644584268e-09 8.780647858753142 0.10599857511513977 ISLSKS(ph)PTK ddPTM_A549_PD325901_60min_R1 4 ISLSKSPTK 9 1 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 IS(0.044)LS(0.048)KS(0.907)PT(0.001)K;ISLS(0.008)KS(0.496)PT(0.496)K;IS(0.006)LS(0.005)KS(0.987)PT(0.001)K;ISLS(0.038)KS(0.922)PT(0.04)K 94.538 0.00059637 761556000.0 56221.7 55274.0 55259.2 53209.5 66513.0 51737.5 58043.3 58195.5 57389.1 57440.8 62055.4 True False 61929.28559577198 59932.133964119865 59009.42161256394 56496.12996745765 61841.35633739323 51316.16695351343 60252.16954401252 57034.74509901341 54977.235702971106 53813.97808509173 54422.9792015915 1.1379253121439 1.1012284671539492 1.08427400480932 1.0380932980200672 1.136309647958133 0.9429135947047306 1.1071089901350082 1.04799013092884 1.0101842366866127 0.9888098533848371 1.0 15.731928313750378 -2.0000000000000084 0.17298675076724893 0.9872181717761372 1.5878455004433423 0.43263977729395486 0.046265927357144916 33.75681429195591 0.34627279814468104 0.049583976632525784 5.327599021904421 0.009999999999999806 2.0000000000000084 0.600627328667205 ISLSKS(ph)PTKTDPK ddPTM_A549_MK2206_60min_R1 3 ISLSKSPTKTDPK 13 2 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 ISLS(0.004)KS(0.496)PT(0.496)KT(0.003)DPK;ISLS(0.002)KS(0.858)PT(0.139)KT(0.001)DPK;IS(0.005)LS(0.123)KS(0.647)PT(0.214)KT(0.011)DPK 113.29 8.2103e-06 450827000.0 36280.4 40258.7 40552.9 35269.5 49122.0 35947.8 37341.2 38846.1 50141.0 50149.0 49964.0 True False 42403.64454938158 42307.69587118919 46303.911009387244 43910.529083308036 41896.21887151993 39751.77233578159 44125.61268767817 44352.653636191884 38784.143558723714 38820.30607000688 37556.55986375124 1.1290609337813349 1.1265061556403 1.2329114055539139 1.1691840052072904 1.1155499604732764 1.0584508400128823 1.1749109302811103 1.1809562376611624 1.0326862657129923 1.0336491470688556 1.0 15.19677729944197 -8.841102309663793 5.531363707435653 1.0143959551633386 1.1478823205237223 0.6338991283045314 0.042750932852706966 0.09172323579550468 4.731511417732081 0.007890360265245758 0.008382515048402749 1.441775662752601e-09 8.841102309663793 0.13348636536038372 ISLSKS(ph)PTKTDPK ddPTM_A549_PD325901_60min_R1 4 ISLSKSPTKTDPK 13 2 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 ISLS(0.112)KS(0.744)PT(0.144)KTDPK;ISLS(0.003)KS(0.87)PT(0.127)KT(0.001)DPK;IS(0.009)LS(0.021)KS(0.91)PT(0.055)KT(0.006)DPK;ISLS(0.011)KS(0.493)PT(0.493)KT(0.002)DPK 158.64 5.9104e-19 970521000.0 63875.0 58398.0 66638.0 58032.0 75000.0 56681.0 64329.0 66656.0 65774.0 62554.0 68148.0 True False 70359.5429777103 63319.404407798815 71160.45540684706 61616.50483976551 69732.25873595371 56219.408728525676 66777.07529717953 65326.493789379645 63009.74751524627 58604.3297644676 59766.228025765 1.1772458343427423 1.0594512402640175 1.1906465868344587 1.0309585676580237 1.166750203909345 0.9406551255717476 1.1173044962514982 1.0930335734290884 1.0542701053190608 0.9805592840693157 1.0 15.867042873622292 -2.000000000822519 0.07454701682570852 0.9153321648468512 1.5020289474005404 0.34021369914619304 0.06458687264330609 154.04255788179262 0.8193147707662702 1.0362142030109094 9.387590427774475 0.009999999981060801 2.000000000822519 0.5866967825536892 ISLSKS(ph)PTKTDPKNEEEEK ddPTM_A549_MK2206_60min_R1 3 ISLSKSPTKTDPKNEEEEK 19 3 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 IS(0.031)LS(0.169)KS(0.75)PT(0.047)KT(0.002)DPKNEEEEK;IS(0.122)LS(0.105)KS(0.506)PT(0.149)KT(0.118)DPKNEEEEK;IS(0.002)LS(0.045)KS(0.778)PT(0.137)KT(0.038)DPKNEEEEK 100.62 4.3982e-10 160325000.0 15201.9 16350.099999999999 17232.6 14270.0 20112.300000000003 15573.300000000001 16090.0 15289.199999999999 20610.5 21847.6 22380.1 True False 17767.609069228653 17182.25025307649 19676.4418046642 17766.15064060465 17153.807312602705 17221.2562692801 19013.344727666517 17456.490921211265 15942.254658205351 16912.211986182818 16822.50351066246 1.0561810290583185 1.0213848516771606 1.1696500340863565 1.0560943339583246 1.0196940842800393 1.023703532495321 1.1302327691960625 1.0376868645113952 0.9476743249362861 1.0053326471570356 1.0 14.038104801768638 -8.596340518502604 5.552279010593398 0.9755785940959921 1.0673897508587207 0.3837056809191176 0.045994201470446534 0.1368120671975672 7.554590647578702 0.00788070758031053 0.008955490337316862 2.5331416840804293e-09 8.596340518502604 0.09181115676272855 ISLSKS(ph)PTKTDPKNEEEEK ddPTM_A549_PD325901_60min_R1 3 ISLSKSPTKTDPKNEEEEK 19 3 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 IS(0.018)LS(0.065)KS(0.897)PT(0.014)KT(0.005)DPKNEEEEK;IS(0.004)LS(0.156)KS(0.8)PT(0.031)KT(0.009)DPKNEEEEK;IS(0.001)LS(0.033)KS(0.787)PT(0.176)KT(0.002)DPKNEEEEK 112.85 4.6746e-11 158928000.0 23456.1 22957.5 23667.699999999997 22172.899999999998 27072.1 24431.500000000004 25961.1 27254.4 25158.9 23023.9 24224.2 True False 25837.34600453182 24892.209094353253 25273.932447441846 23542.469674690452 25170.64908967485 24232.537964238025 26949.06386695901 26710.789611336815 24101.558925431484 21570.16702471666 21244.776969855848 1.216174029089237 1.1716860633403088 1.1896539315664718 1.1081532984834246 1.1847923433317005 1.1406350840313129 1.2685030257176604 1.2572873628768462 1.1344698492071306 1.0153162377426934 1.0 14.3748205776995 -9.892776758736547 0.8605654238321966 1.014514458307569 1.1870652218206366 0.6807319477957343 0.04689948370489378 0.23436608447598967 0.35654597361831436 0.019676583421281008 0.010251132830846808 1.2800391161486554e-10 9.892776758736547 0.17255076351306764 ISMPDFDLHLK ddPTM_A549_MK2206_60min_R1 1 ISMPDFDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 61.353 0.0084199 614060.0 283.89 304.05 410.44 418.19 213.57 295.5 375.15 304.46 438.48 537.84 455.97 False True 331.8036915558794 319.5248462974481 468.6465637400261 520.6465687732624 182.15413591446824 326.769613862975 443.30989897974484 347.61813736964535 339.1649801086768 416.3415704538972 342.74006486819803 0.9680913484201964 0.932265816137727 1.3673527310565396 1.5190712208491848 0.5314643795277225 0.9534036062828998 1.293428882176997 1.0142325715650524 0.9895691075366515 1.2147443883282303 1.0 8.420971036455747 -6.734943500411887 24.99999046781897 0.9894400678811858 1.1899969037353106 0.13839549999984235 0.2355556058544754 336.9799708824722 317953.3662003816 0.03181907672307984 0.06622154624693492 1.8410114924817393e-07 6.734943500411887 0.20055683585412487 ISMPDFDLHLK ddPTM_A549_PD325901_60min_R1 2 ISMPDFDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 81.865 0.00080346 3607000.0 882.1700000000001 1202.92 1307.08 1175.62 1196.73 1337.08 1114.77 1307.31 1369.8 1352.9 1171.56 False True 971.7272489807704 1304.2942900481073 1395.7863089105535 1248.235377373262 1112.675813294373 1326.1912637874614 1157.1931823755508 1281.2346764851452 1312.2320696078154 1267.4776631126424 1027.4655471307337 0.9457516621305538 1.269428735289895 1.3584750484416535 1.2148683533565119 1.082932480219502 1.2907403732328926 1.1262598396677048 1.246985536462102 1.2771543272397905 1.2335962667090479 1.0 10.00487430307807 -10.87699386598804 1.0921069036671915 0.9984083046491566 1.2116892224086337 0.0 0.12844539967728866 0.46402807900253057 0.970685971483259 0.07617935476151204 0.017820853760689117 1.3274132060936283e-11 10.87699386598804 0.2132809177594771 ISMPDLDLHLKS(ph)PK ddPTM_A549_MK2206_60min_R1 12 ISMPDLDLHLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;IS(0.002)MPDLDLHLKS(0.998)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;IS(0.001)MPDLDLHLKS(0.999)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK 180.05 5.1757e-24 441370400.0 53425.6 56428.0 53531.40000000001 44120.1 60632.100000000006 43817.5 39800.1 45834.50000000001 63844.7 61072.4 63717.49999999999 True False 62442.535149486765 59299.94417652492 61122.95746562914 54929.52648062658 51713.19840885718 48454.23876629751 47031.262989161005 52331.68073726928 49383.97738903586 47276.10242337608 47894.68623646164 1.3037466169253245 1.2381320107987386 1.276194965843559 1.1468814350183465 1.0797272614657731 1.0116829772529106 0.9819724626018467 1.092640642406585 1.0310951228539513 0.9870845001461845 1.0 15.547577981950226 -6.581045764810009 1.5271303604188269 1.0185365639580974 1.2780912390527632 0.918543833111471 0.03257638279830079 0.07310111781607442 0.33607663585336117 0.004707333612810737 0.013734556933323757 2.6239420247075074e-07 6.581045764810009 0.2595546750946658 ISMPDLDLHLKS(ph)PK ddPTM_A549_PD325901_60min_R1 12 ISMPDLDLHLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;IS(0.001)MPDLDLHLKS(0.999)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK 200.6 8.4396e-32 568787000.0 49006.3 50862.1 53009.99999999999 52860.1 65638.2 64659.59999999999 58254.00000000001 65035.299999999996 67464.40000000001 78291.7 86110.49999999999 True False 53981.38349946873 55148.42766755547 56607.577375025605 56125.148323002664 61027.99927149715 64133.03365542205 60470.88784781193 63738.11992229411 64629.10588177062 73348.34870065485 75519.45439943402 0.7148010261561595 0.7302545828240091 0.7495760903623511 0.7431879476531718 0.8081096421686347 0.849225330948666 0.8007325837918808 0.8439960329317712 0.8557941314027155 0.9712510409927506 1.0 16.204560721340382 -14.999999999989475 0.05785899997216884 1.8702812049336532 0.41179654016903666 0.9505459841496825 0.019922248025435088 35.988604827071434 0.15776946870413944 4.490702818642965 0.8455986173521712 1.0000000000242345e-15 14.999999999989475 -1.4584846647646166 ISMPDLDLHLKSPK ddPTM_A549_MK2206_60min_R1 3 ISMPDLDLHLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ;; 127.76 4.3714000000000004e-08 9460800.0 1806.5700000000002 2143.4300000000003 1748.92 1669.24 2658.3900000000003 1569.73 1556.05 1791.8600000000001 2488.16 1813.7 2558.27 False True 2111.4748496040893 2252.521431670249 1996.943154312948 2078.2038749350318 2267.3443525479393 1735.837786697557 1838.7641431625552 2045.8616423411033 1924.5957327750532 1403.9839103306435 1922.9809543399035 1.098021717187984 1.1713696001963088 1.0384622633969005 1.0807199469369737 1.1790779037259078 0.9026806962284312 0.9562050726569691 1.0639011466670405 1.000839726691783 0.7301080684975298 1.0 10.909128758616319 -7.253784569879534 24.998733923802927 0.9959079589997287 1.1107503370501766 0.3848077383766352 0.09544828892049692 346.36224405898014 1131133.8119337868 0.007424184406413033 0.012708793828648956 5.57462207358853e-08 7.253784569879534 0.11484237805044784 ISMPDVDLHLK ddPTM_A549_PD325901_60min_R1 2 ISMPDVDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 105.86 0.00018014 4902200.0 1685.08 1492.58 1246.8600000000001 1468.63 1446.05 1498.0 1250.8600000000001 1717.1 1733.21 1796.3200000000002 1900.58 False True 1856.1480811096683 1618.3649548099652 1331.4794175782756 1559.3439395992698 1344.4844366016796 1485.8007846603161 1298.4621617968558 1682.8510934611081 1660.3692111001321 1682.900048638111 1666.8207087692726 1.1135859251953912 0.970929234497521 0.798813819970714 0.9355198980882832 0.806616110256036 0.8913980830952023 0.7790052973097502 1.0096173419297578 0.9961294591342676 1.0096467123213935 1.0 10.702883214133124 ISMQDVDLS(ph)LGSPK ddPTM_A549_PD325901_60min_R1 2 ISMQDVDLSLGSPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMQDVDLS(0.569)LGS(0.431)PK;ISMQDVDLS(0.935)LGS(0.064)PK 145.73 1.4949e-13 45342300.0 5771.780000000001 5602.0599999999995 6346.679999999999 6319.02 7346.36 6709.48 6604.28 7111.85 7092.81 8341.64 9331.38 True False 6357.726856640139 6074.1652566312805 6777.403870487219 6709.331513864332 6830.377017166155 6654.840219401006 6855.60948940068 6969.998572611603 6794.723861611191 7814.947426806815 8183.679416491498 0.7768787770239685 0.7422291303824549 0.8281609683817286 0.8198429059114772 0.834633991576184 0.8131843735215699 0.8377172590101059 0.8516949672498018 0.830277374736683 0.9549430065721263 1.0 12.998533915412882 -14.999999999999789 0.171808430018589 1.7657353931986317 0.7688292399822599 0.8594201387893683 0.026187988746174663 10.900961070293118 0.11773396709241683 2.797532248397935 0.030859342945938086 1.0000000000004868e-15 14.999999999999789 -0.9969061532163718 ISMQDVDLSLGS(ph)PK ddPTM_A549_MK2206_60min_R1 12 ISMQDVDLSLGSPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMQDVDLS(0.006)LGS(0.994)PK;ISMQDVDLS(0.001)LGS(0.999)PK;ISMQDVDLS(0.016)LGS(0.984)PK;ISMQDVDLS(0.096)LGS(0.904)PK;ISMQDVDLS(0.003)LGS(0.997)PK;IS(0.001)MQDVDLS(0.056)LGS(0.943)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.011)LGS(0.989)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.166)LGS(0.834)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.249)LGS(0.751)PK 222.09 2.6143e-47 129312100.0 23526.020000000004 27004.239999999998 25054.0 22407.840000000004 32124.56 23354.511 23459.849999999995 24545.289999999997 33216.56 33498.13 34792.67999999999 True False 27496.637020034 28378.64047156519 28607.03393417455 27897.761805926173 27399.079779147305 25825.869852550277 27722.20107578293 28024.660024298024 25693.062195946615 25930.87916753831 26152.69732688217 1.0513881867080075 1.0851133294918298 1.0938464043159932 1.066725984598547 1.047657893053501 0.987503106457935 1.0600130735764481 1.0715781884376292 0.9824249435845724 0.9915183448739012 1.0 14.674672129824105 -7.7398954894239465 0.5053199917022714 0.9906789088384637 1.080879772722468 0.4785986105316681 0.028599420398271427 0.5367330635964059 0.28284192888089965 0.008626457777018514 0.01860640085217018 1.8201388122966688e-08 7.7398954894239465 0.09020086388400428 ISMQDVDLSLGS(ph)PK ddPTM_A549_PD325901_60min_R1 13 ISMQDVDLSLGSPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMQDVDLS(0.003)LGS(0.997)PK;ISMQDVDLS(0.065)LGS(0.935)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.004)LGS(0.996)PK;ISMQDVDLS(0.007)LGS(0.993)PK;ISMQDVDLS(0.011)LGS(0.989)PK;IS(0.006)MQDVDLS(0.277)LGS(0.717)PK;ISMQDVDLS(0.003)LGS(0.997)PK;IS(0.003)MQDVDLS(0.03)LGS(0.967)PK;IS(0.004)MQDVDLS(0.03)LGS(0.966)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.007)LGS(0.993)PK 191.78 1.2153000000000003e-26 151061390.0 28843.279999999995 28301.79 30245.119999999995 29022.559999999998 33289.770000000004 30889.53 31538.65 34509.76000000001 34360.89 36840.729999999996 41643.049999999996 True False 31771.42855229953 30686.88116844063 32297.735721881403 30815.217616183927 30951.611398671914 30637.975909071043 32738.870584361503 33821.43576441703 32916.8212865137 34514.60002052166 36521.21884704368 0.8699443653664194 0.8402480020440136 0.8843553622114624 0.8437620262686922 0.8474966711352621 0.8389089103895316 0.8964342269483607 0.9260763148696174 0.9013067560634892 0.945056082741213 1.0 15.156447293700792 -10.166188309285586 0.30435903670161174 1.0382775468108691 0.8460375611147286 0.7282804334108219 0.025374176843608355 0.6821168114461288 0.10861975711247558 0.046585998111244795 0.011822028144223512 6.820428974766596e-11 10.166188309285586 -0.19223998569614054 ISMS(ph)EVDLNVAAPK ddPTM_A549_MK2206_60min_R1 1 ISMSEVDLNVAAPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(0.143)MS(0.857)EVDLNVAAPK 224.16 6.1543e-47 23644000.0 2230.5 2180.1 2648.8 1784.8 2166.6 2000.4 2066.4 2070.9 2976.8 2303.0 2923.7 True False 2606.9538695106885 2291.057778040015 3024.439669707095 2222.076080122715 1847.896010077666 2212.081000241947 2441.8381320851536 2364.456416865264 2302.5595529727907 1782.7507004970348 2197.66459998498 1.1862382774553066 1.0424965565972502 1.3762062098683145 1.0111079188962238 0.8408453273944966 1.0065598728109217 1.1111059131142405 1.0758950282410809 1.0477301918539013 0.8112023556775765 1.0 11.101755508592293 ISNLS(ph)PEEEQGLWK ddPTM_A549_MK2206_60min_R1 2 ISNLSPEEEQGLWK 14 0 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 IS(0.159)NLS(0.841)PEEEQGLWK;IS(0.032)NLS(0.968)PEEEQGLWK 56.358999999999995 0.014191 27574000.0 1328.51 1509.4499999999998 1424.33 1178.77 2190.18 1601.29 1763.8600000000001 1230.4099999999999 2576.7 2391.82 2254.5 True False 1552.730009048933 1586.2745576177695 1626.321411489697 1467.5687029169965 1868.007423313903 1770.737444949724 2084.330530226344 1404.8243854725913 1993.081564144381 1851.5062008088657 1694.645428965398 0.9162565705540503 0.9360510054225383 0.9596824112537727 0.8660033997866831 1.1022998624876619 1.0449014376008916 1.2299508172036044 0.828978358222259 1.1761053551840528 1.0925625910661638 1.0 10.726767734198265 -6.768444633534069 24.997523098516385 1.0748484372892404 0.9235509656405534 0.341592972923061 0.09869833740676495 142.77207377292785 509469.0129918687 0.014604406722196903 0.028024804400428222 1.7043365845183938e-07 6.768444633534069 -0.151297471648687 ISNLS(ph)PEEEQGLWK ddPTM_A549_PD325901_60min_R1 2 ISNLSPEEEQGLWK 14 0 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 IS(0.002)NLS(0.998)PEEEQGLWK;IS(0.002)NLS(0.998)PEEEQGLWK 176.23 6.790499999999999e-23 41172000.0 5581.2 4382.9 4322.6 4235.4 4637.5 4048.8 3822.2 4172.7 6189.799999999999 4854.4 5978.0 True False 6147.799315337716 4752.262364788887 4615.957629905407 4497.011038708691 4311.777998506474 4015.8279151753604 3967.6559125880963 4089.472225080175 5929.664231609324 4547.892355542914 5242.743897664246 1.17263010273622 0.9064456432644212 0.8804469033785751 0.857759052604535 0.822427736824502 0.7659782727446399 0.7567899538933747 0.7800251747757738 1.131023057267992 0.8674641455534565 1.0 12.356106358154369 -8.763409747895532 24.997213713894855 1.061872003078884 0.8605785332679825 0.12890852716152867 0.12575328453356915 40.00022556408332 507463.8547722679 0.02032523617889246 0.022172660850449496 1.7242103673867331e-09 8.763409747895532 -0.20129346981090146 ISPEERRS(ph)PPAPGLQPMR ddPTM_A549_PD325901_60min_R1 4 ISPEERRSPPAPGLQPMR 18 2 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 IS(0.002)PEERRS(0.998)PPAPGLQPMR;IS(0.006)PEERRS(0.994)PPAPGLQPMR;ISPEERRS(1)PPAPGLQPMR;ISPEERRS(1)PPAPGLQPMR 139.83 2.4401e-14 80520500.0 6725.2 5710.450000000001 5637.359999999999 6499.5 6273.34 7644.1 5902.799999999999 7559.6 7205.87 6113.5599999999995 7934.199999999999 True False 7407.937353169426 6191.689662326016 6019.945149799552 6900.959353564517 5832.72224024811 7581.84898399328 6127.434284136102 7408.817847608522 6903.032342987926 5727.54877825332 6958.343699037751 1.0646121654200336 0.8898223384944677 0.865140529150929 0.9917531602411117 0.8382342828300793 1.0896054164501463 0.8805880464029747 1.0647387033545161 0.9920510744449899 0.8231195563170249 1.0 12.76452822557032 -7.260328893330556 24.99997704687687 0.9980633860792613 0.9275224183007238 0.02435157325723203 0.09218341414847478 127.53673013979245 2871174.495502268 0.009947815432025074 0.016626132130393417 5.491248614160337e-08 7.260328893330556 -0.07054096777853747 ISQDADLKT(ph)PTKPK ddPTM_A549_MK2206_60min_R1 3 ISQDADLKTPTKPK 14 2 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 ISQDADLKT(0.992)PT(0.008)KPK;IS(0.002)QDADLKT(0.987)PT(0.011)KPK;IS(0.002)QDADLKT(0.98)PT(0.018)KPK 82.81299999999999 0.00066104 91084300.0 5805.0 5896.4 5853.0 5034.0 7703.699999999999 5270.3 5182.1 5259.4 8455.5 8569.7 7668.0 True False 6784.742081376172 6196.50157443931 6683.043410901404 6267.33022598485 6570.495935029679 5827.999647857997 6123.620491811111 6004.936056236986 6540.342750658911 6633.798818084868 5763.823973966149 1.1771251363714907 1.0750678026302443 1.1594808309704034 1.0873562853919414 1.1399543019889362 1.0111342182172312 1.0624232314293562 1.041831964917715 1.1347228472278328 1.1509370945483748 1.0 12.492810561228897 -14.999999999975397 0.3155270438919649 0.03191565746192912 1.106304070247954 0.0 0.0665179519924571 38.14142885053498 0.503774214027238 23.709670773598212 0.01648563686615516 1.0000000000566494e-15 14.999999999975397 1.074388412786025 ISQDADLKT(ph)PTKPK ddPTM_A549_PD325901_60min_R1 1 ISQDADLKTPTKPK 14 2 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 ISQDADLKT(0.907)PT(0.093)KPK 100.53 5.8635e-05 3399300.0 2332.2 2189.5 2462.2 2566.9 3406.5 3298.6 2876.1 2732.9 3322.3 3334.2 3377.2 True False 2568.9632271251044 2374.0168490509186 2629.2996984113925 2725.451583147126 3167.239191787022 3271.7372952473456 2985.55155936231 2678.390165581426 3182.6752846094646 3123.6780429818677 2961.8258098346755 0.8673579717601623 0.8015383082853993 0.8877293491335184 0.9201930694564567 1.069353633583135 1.1046352842167881 1.008010514814495 0.9043037428764015 1.0745653150976886 1.0546461012696173 1.0 11.532271080360646 -6.4820547656090115 2.4997248707205486 1.0308909749615667 0.844678603164899 0.6826600416476238 0.05394610062208115 0.12997258858845603 1.6008848941385005 0.008238669377212574 0.021035671477071367 3.295681501975843e-07 6.4820547656090115 -0.18621237179666772 ISQDADLKTPT(ph)KPK ddPTM_A549_MK2206_60min_R1 1 ISQDADLKTPTKPK 14 2 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 IS(0.01)QDADLKT(0.367)PT(0.624)KPK 69.737 0.00092536 95393000.0 4149.9 4073.0 3643.6 3288.0 4833.4 3520.0 3530.4 3941.1 5116.9 4148.1 5139.5 True False 4850.301664686127 4280.298302810414 4160.317268402588 4093.56014760393 4122.413262766262 3892.484063613106 4171.827981762206 4499.762994112558 3957.930320010236 3211.041329019432 3863.2203070160426 1.2555073951846427 1.107961224742195 1.0769039655457866 1.0596237911075288 1.0670924604738425 1.0075749644781886 1.079883529858677 1.1647699681896169 1.0245158198258042 0.8311825559592911 1.0 11.915588236831146 -2.0000000000000004 0.5378559024482105 1.02790718102174 9.790970243941425 0.44303211192106373 0.07536487706212293 56.58578468165574 0.48554902917719056 0.009079848355359762 573.0478176465421 0.00999999999999999 2.0000000000000004 8.763063062919684 ISQDADLKTPT(ph)KPK ddPTM_A549_PD325901_60min_R1 3 ISQDADLKTPTKPK 14 2 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 ISQDADLKT(0.424)PT(0.576)KPK;ISQDADLKT(0.354)PT(0.646)KPK;IS(0.002)QDADLKT(0.435)PT(0.562)KPK 114.23 1.5128e-06 174855800.0 8331.5 7589.7 8701.5 8557.3 10095.7 9006.2 9196.9 10910.0 9791.5 10092.8 10982.800000000001 True False 9177.307746673872 8229.310655054465 9292.036116370216 9085.864985961634 9386.612860274252 8932.856493196097 9546.893062236786 10692.391491270575 9379.997305858458 9455.53888555197 9631.9852257054 0.952795039820233 0.8543732638929364 0.9647062260407187 0.9433013831576168 0.974525255211531 0.9274159255722797 0.9911656671522373 1.110092181488735 0.9738384233424229 0.9816812073504289 1.0 13.233617463842561 -7.800670071669279 6.719461928308084 0.9988535193856347 0.9358196069125817 0.39202712826062647 0.04544349936403552 0.1843665830736899 22.51051922502176 0.007203470355021928 0.010063380097563473 1.5824497509247096e-08 7.800670071669279 -0.06303391247305301 ISQQQEQLLMKS(ph)PTVPVPGSK ddPTM_A549_MK2206_60min_R1 2 ISQQQEQLLMKSPTVPVPGSK 21 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 IS(0.003)QQQEQLLMKS(0.878)PT(0.119)VPVPGSK;IS(0.004)QQQEQLLMKS(0.827)PT(0.166)VPVPGS(0.002)K 55.994 0.0014302999999999998 3041400.0 1826.81 1932.65 2003.68 2271.8 2933.3999999999996 2387.8 1999.7599999999998 2264.37 3513.2999999999997 3125.0 3461.0 True False 2135.1308667836006 2031.0136299844205 2287.831953110359 2828.391101984976 2501.9007458514825 2640.4754111066395 2363.090506687285 2585.3513818422884 2717.543159587242 2419.0603295932424 2601.538181259368 0.8207186356765342 0.7806972215957391 0.8794150974185787 1.0871995353978592 0.9617005677158071 1.0149670030321918 0.9083435806209642 0.9937779889091447 1.044590919004586 0.9298577076513286 1.0 11.345149165726193 -6.049094883193581 4.57831288804865 1.0101462570739679 0.8049431285196589 0.6878840007665272 0.050244065430175094 0.06638514981508674 3.0208467166913935 0.006266314457396914 0.018129213734326098 8.931103386823187e-07 6.049094883193581 -0.205203128554309 ISQQQEQLLMKS(ph)PTVPVPGSK ddPTM_A549_PD325901_60min_R1 2 ISQQQEQLLMKSPTVPVPGSK 21 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 ISQQQEQLLMKS(0.935)PT(0.064)VPVPGS(0.001)K;ISQQQEQLLMKS(0.94)PT(0.06)VPVPGSK 64.779 0.00033091 7354300.0 3179.0 3033.5 2845.2 3721.8 4578.5 4135.9 3867.8 3963.2 4365.799999999999 3332.2 4076.2 True False 3501.7297397438915 3289.1436910691746 3038.2923815774902 3951.6871331789225 4256.921954967525 4102.218601653275 4014.9912455413737 3884.1508669297446 4182.320608478461 3121.804323323189 3574.8532411607553 0.9795450340240763 0.9200779638162683 0.8499068847343664 1.1054124090128548 1.190796283873545 1.147520842092327 1.1231205799759505 1.0865203701812833 1.169927917689975 0.8732678274394108 1.0 11.803668300652253 -6.273724718134221 24.550028819353468 1.0994066485426994 0.9168667627653206 0.4203441821437597 0.0883421672335756 325.269139546909 649991.7074402346 0.010577877240151495 0.024751241931382173 5.324456482831093e-07 6.273724718134221 -0.18253988577737879 ISQRDPS(ph)PESNK ddPTM_A549_MK2206_60min_R1 4 ISQRDPSPESNK 12 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 ISQRDPS(0.983)PES(0.016)NK;ISQRDPS(0.919)PES(0.081)NK;ISQRDPS(0.993)PES(0.007)NK;ISQRDPS(0.993)PES(0.007)NK 139.3 7.524e-09 184076000.0 8211.5 8815.300000000001 7001.700000000001 7094.77 9427.8 7510.5 7707.700000000001 6377.9 10203.0 11003.7 10152.900000000001 True False 9597.40044809998 9263.961116809387 7994.646343773848 8832.988968496324 8040.983108931137 8305.256124933585 9108.089319915187 7281.986856499571 7892.03679084298 8517.956527598444 7631.654724215035 1.2575779165752463 1.2138863000988618 1.0475639468341054 1.1574146482897723 1.0536356006014416 1.0882641347205124 1.1934619226175767 0.9541819067618486 1.0341186906427724 1.116134945226387 1.0 12.89778018622946 -2.000000000000175 0.22382636045106816 0.9990823841031292 2.3376433680607356 0.40590795993441586 0.06999318322012547 22.953360045994863 0.2683649059723394 0.03552244188537156 11.322063125828704 0.00999999999999597 2.000000000000175 1.3385609839576063 ISQRDPS(ph)PESNK ddPTM_A549_PD325901_60min_R1 4 ISQRDPSPESNK 12 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 ISQRDPS(0.991)PES(0.009)NK;ISQRDPS(0.994)PES(0.006)NK;ISQRDPS(0.824)PES(0.176)NK;ISQRDPS(0.982)PES(0.018)NK 187.63 1.8139e-19 415412000.0 21812.6 21648.8 21265.1 21740.199999999997 24995.8 21090.7 22620.200000000004 23644.2 22915.3 22205.6 25399.3 True False 24026.99909441258 23473.220352470213 22708.277563434393 23083.042778423463 23240.181238828707 20918.94433179929 23481.024089248385 23172.597882483922 21952.24963110231 20803.534626368604 22275.347119428498 1.0786363492156894 1.0537757381117052 1.0194354072995924 1.0362596216644586 1.0433139880706364 0.9391074455380245 1.0541260687591396 1.0402799901723123 0.9854952882846713 0.9339263947192912 1.0 14.44316029316314 -2.000000000020801 0.2895984356230236 0.9942359201103363 1.666112174829214 0.3767211806450712 0.03561856964416636 33.99790621253338 0.42428971096788143 0.010515092520875397 11.891732740096026 0.009999999999521036 2.000000000020801 0.6718762547188777 ISQRDPS(ph)PESNKK ddPTM_A549_MK2206_60min_R1 3 ISQRDPSPESNKK 13 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 IS(0.017)QRDPS(0.943)PES(0.04)NKK;ISQRDPS(0.956)PES(0.044)NKK;ISQRDPS(0.969)PES(0.031)NKK 88.992 3.8884e-05 49418000.0 7048.4 7421.200000000001 6605.700000000001 6442.9 8476.9 5822.27 6270.1 5655.04 9383.400000000001 9605.9 10436.4 True False 8237.99760316482 7798.907381491935 7542.4875891664815 8021.410789232769 7229.959239281525 6438.378746889966 7409.296008510999 6456.659237833667 7258.074882210727 7435.920518412706 7844.753850013084 1.0501282462994146 0.994155779850113 0.9614689935942224 1.0225191182027198 0.9216298404658632 0.8207241259557466 0.9444905665840161 0.823054408242892 0.9252138462188487 0.9478844920545599 1.0 12.937512464177093 -5.485519276689501 0.9638752837344403 0.9411094743088769 1.0761540747565672 0.29074616240926976 0.05901275756835434 1.9079461573343646 1.6923209749786599 0.010254124982519064 0.24506069378326242 3.2694953445895856e-06 5.485519276689501 0.1350446004476903 ISQRDPS(ph)PESNKK ddPTM_A549_PD325901_60min_R1 6 ISQRDPSPESNKK 13 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 IS(0.005)QRDPS(0.983)PES(0.012)NKK;IS(0.012)QRDPS(0.95)PES(0.038)NKK;IS(0.002)QRDPS(0.923)PES(0.075)NKK;IS(0.082)QRDPS(0.909)PES(0.009)NKK;IS(0.001)QRDPS(0.886)PES(0.113)NKK;IS(0.106)QRDPS(0.844)PES(0.049)NKK 60.489 0.0016600000000000002 79656600.0 22977.200000000004 21632.0 21236.8 23808.899999999998 28475.1 27048.4 25102.699999999997 27527.399999999994 28353.0 26411.1 28569.600000000002 True False 25309.82842907938 23455.00455751059 22678.05695525265 25279.52167906486 26475.107209762107 26828.12679826844 26057.996985224527 26978.344412172457 27161.422010213446 24743.49863865348 25055.720317616007 1.0101417204631198 0.9361137600590155 0.905104968756708 1.00893214637663 1.0566492151953089 1.0707385961443026 1.0400019099392583 1.0767339382059076 1.0840407565978847 0.9875389062854836 1.0 14.6128523934181 -6.489493116249045 4.9400029637670695 1.0464826468540365 0.9492466188238059 0.5635270321646326 0.03638968631449 0.11408312573343721 6.977596154538768 0.0055632983784897885 0.012820470549049416 3.2397155748015846e-07 6.489493116249045 -0.09723602803023057 ISQRDPS(ph)PESNKKGESPSLESR ddPTM_A549_MK2206_60min_R1 3 ISQRDPSPESNKKGESPSLESR 22 3 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 IS(0.017)QRDPS(0.902)PES(0.049)NKKGES(0.014)PS(0.016)LES(0.001)R;IS(0.022)QRDPS(0.877)PES(0.062)NKKGES(0.018)PS(0.021)LES(0.001)R;IS(0.001)QRDPS(0.888)PES(0.032)NKKGES(0.032)PS(0.039)LES(0.008)R 72.881 7.8953e-05 86884000.0 4312.5 5139.5 5409.8 4649.1 6660.3 3992.7999999999997 4574.9 3636.2 7446.3 7432.6 8617.6 True False 5040.344569497796 5401.078597420606 6176.990986552953 5788.129708706029 5680.578692846058 4415.315445793864 5406.100111535211 4151.642485395468 5759.724939297668 5753.570497835116 6477.612086339416 0.7781176924946368 0.8338070457801721 0.9535907529226023 0.8935591745162649 0.8769556770504651 0.6816270234991821 0.8345822564670231 0.6409217517286706 0.8891741065267409 0.8882239969214542 1.0 12.661246359175054 -9.531734365744015 1.4215138320566187 0.9725532707337745 0.8195668077478951 0.208162110088829 0.09138275492455804 0.2984795003812209 1.2318271759762458 0.022341746948686268 0.017424618770476047 2.939447001701547e-10 9.531734365744015 -0.15298646298587937 ISQRDPS(ph)PESNKKGESPSLESR ddPTM_A549_PD325901_60min_R1 3 ISQRDPSPESNKKGESPSLESR 22 3 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 ISQRDPS(0.971)PES(0.029)NKKGESPSLESR;IS(0.003)QRDPS(0.948)PES(0.044)NKKGES(0.002)PS(0.003)LESR;ISQRDPS(0.989)PES(0.01)NKKGESPSLESR 125.62 1.4674e-16 159251000.0 9809.4 9311.0 10156.0 11061.099999999999 11457.3 15095.8 12693.099999999999 14041.9 13245.7 13898.899999999998 12714.5 True False 10805.243066701387 10095.670646957344 10845.247232989246 11744.31902541925 10652.578773539239 14972.864809796543 13176.142866430835 13761.823288842546 12689.02929216253 13021.321081998884 11150.697103856153 0.9690195120594478 0.9053847085009638 0.9726071053655223 1.0532363058591028 0.9553285031709224 1.3427738795468314 1.1816429720680188 1.234167080377729 1.1379583871733354 1.1677584783013994 1.0 13.444846284927214 -6.610552308095446 1.7072068646917247 1.1055177262661513 0.9456708649659654 0.39320209695049446 0.10266347611884195 0.399386194767284 2.3226475391674968 0.01745677026482544 0.04711692083647091 2.451589157212342e-07 6.610552308095446 -0.15984686130018588 ISQRDPSPES(ph)NKKGESPSLESR ddPTM_A549_PD325901_60min_R1 1 ISQRDPSPESNKKGESPSLESR 22 3 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 ISQRDPS(0.123)PES(0.799)NKKGES(0.07)PS(0.006)LES(0.002)R 100.95 2.5393e-10 50717000.0 5106.8 4832.6 5067.2 6116.5 5749.6 7637.2 7053.7 7398.1 7779.1 6745.8 7652.0 True False 5625.238576572541 5239.860162011178 5411.090663548949 6494.302313420626 5345.7679310432 7575.005175305594 7322.132413432744 7250.539091802824 7452.171479548947 6319.869036754569 6710.852510024557 0.8382301008954758 0.7808039521333487 0.8063194140336052 0.9677313431817415 0.79658551921053 1.1287694319000725 1.0910882637481703 1.0804199736132023 1.1104656924611322 0.9417386281868148 1.0 12.712280334822387 -7.258105948469768 24.990937440302112 1.063765078147003 0.8402147557339343 0.7295368597227145 0.06690113193737239 111.54541126946692 836261.7999864704 0.00946129151964827 0.01596777947137815 5.519427734532761e-08 7.258105948469768 -0.2235503224130686 ISQSALPPLPGS(ph)PAIQINGEWETHK ddPTM_A549_MK2206_60min_R1 1 ISQSALPPLPGSPAIQINGEWETHK 25 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 ISQSALPPLPGS(1)PAIQINGEWETHK 86.304 9.1799e-08 3371900.0 890.89 972.5 696.04 749.05 844.45 737.38 893.51 857.08 961.72 1103.0 1210.7 True False 1041.2504518306998 1021.9960961166531 794.74893827504 932.5672836261325 720.232523636151 815.4090621667702 1055.8492012192241 978.5737146974164 743.8919555512604 853.8315339332305 910.0497763798666 1.1441686805009097 1.123011205147595 0.8733027125576717 1.0247431600234433 0.791421021497528 0.896004903611347 1.1602103847762488 1.075296912428389 0.8174189751580689 0.9382250906425477 1.0 9.829801647363444 -5.746972919645002 23.0939173758186 0.9354025957497735 1.1335904587959962 0.29229472015974256 0.10555253674620327 88.54914800379386 141350.71674007282 0.015834565633616928 0.06061782298947625 1.7907175104252335e-06 5.746972919645002 0.1981878630462227 ISQSALPPLPGS(ph)PAIQINGEWETHK ddPTM_A549_PD325901_60min_R1 1 ISQSALPPLPGSPAIQINGEWETHK 25 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 ISQSALPPLPGS(1)PAIQINGEWETHK 112.8 2.1766e-13 5505500.0 2914.5 2491.9 3158.3 3903.9 4226.0 2956.3 4088.7 2902.1 4278.8 3478.8 3607.3 True False 3210.3778944584997 2701.9011583238116 3372.6412304007404 4145.035036599817 3929.180338908543 2932.224872958141 4244.297715922491 2844.2153388465917 4098.976915927814 3259.147974304276 3163.624968558755 1.0147782769337048 0.854052292915968 1.0660685966001864 1.3102169434729682 1.2419867645369325 0.9268560281637832 1.3415931907554945 0.8990368223520262 1.2956582896724245 1.030194162296373 1.0 11.62736287054457 -5.967272480388075 7.541041499587765 1.1425108932451116 0.9391330229368866 0.19447512440463732 0.15160020176089276 0.23278237156285747 42.31009620403354 0.021028155186112972 0.06539012747854993 1.0782699933591708e-06 5.967272480388075 -0.20337787030822496 ISQTVEILK ddPTM_A549_PD325901_60min_R1 2 ISQTVEILK 9 0 F8W9E5;E7EQM7;C9JM82;E7EPG2;B4DJ62;E7EX32;G3XAH0;Q99719-2;Q99719 F8W9E5 SEPT5 Septin-5 0 ; 106.42 0.0014613 5339900.0 4542.5 4275.2 4730.1 5142.3 5385.6 6079.1 4988.2 5153.7 6815.6 5174.5 5055.8 False True 5003.651255988242 4635.4861078157055 5051.113030401972 5459.928191989353 5007.334035311366 6029.593825119178 5178.028680647776 5050.905410500566 6529.164033887446 4847.781186914302 4433.968651356794 1.128481423624212 1.0454485523701769 1.13918555307249 1.2313862864859488 1.1293120067006164 1.3598638825004148 1.1678090414697226 1.139138728226008 1.472532746006114 1.093327799110822 1.0 12.114382854891671 -6.09201572837789 3.3471956830580014 1.221203977241305 1.0866257822305703 0.09230837037689377 0.12415394057815292 0.47235826986740104 9.976351745053798 0.023865868092161752 0.07276891330041164 8.090665975497704e-07 6.09201572837789 -0.13457819501073476 ISREPEPAAGPQAEESATVSAPAPMS(ph)PTR ddPTM_A549_MK2206_60min_R1 4 ISREPEPAAGPQAEESATVSAPAPMSPTR 29 1 Q9BWG6-2;Q9BWG6 Q9BWG6-2 SCNM1 Sodium channel modifier 1 1 ISREPEPAAGPQAEESATVSAPAPMS(0.875)PT(0.125)R;ISREPEPAAGPQAEESATVSAPAPMS(0.808)PT(0.192)R;ISREPEPAAGPQAEESATVSAPAPMS(0.872)PT(0.128)R;ISREPEPAAGPQAEESATVSAPAPMS(0.776)PT(0.224)R 210.33 2.7417999999999995e-90 101686000.0 3502.0 3836.91 3897.3199999999997 3397.13 4453.76 3535.82 3632.48 3354.3100000000004 6790.6 5866.7 6164.299999999999 True False 4093.051984320299 4032.1923302323376 4450.018579561635 4229.427002502964 3798.6178038601965 3909.978125512639 4292.454596417287 3829.7937146435506 5252.53994235993 4541.408395399895 4633.534183974899 0.8833542220269227 0.8702196142585275 0.9603940324756957 0.9127864033312753 0.8198100311847779 0.8438435911480524 0.9263888914994438 0.8265383533564749 1.1335925740066548 0.9801175981621931 1.0 12.177897299894525 -8.758566402304389 24.99999999263022 1.0630853846086719 0.8821149270592856 0.6094614258507145 0.055137562820363396 33.08608303571902 287907.343121873 0.010393493200012087 0.011534361952906375 1.743546754093196e-09 8.758566402304389 -0.18097045754938623 ISREPEPAAGPQAEESATVSAPAPMS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 ISREPEPAAGPQAEESATVSAPAPMSPTR 29 1 Q9BWG6-2;Q9BWG6 Q9BWG6-2 SCNM1 Sodium channel modifier 1 1 ISREPEPAAGPQAEESATVSAPAPMS(0.966)PT(0.034)R;ISREPEPAAGPQAEESATVSAPAPMS(0.973)PT(0.027)R;ISREPEPAAGPQAEESATVSAPAPMS(0.824)PT(0.176)R;ISREPEPAAGPQAEESATVSAPAPMS(0.851)PT(0.149)R 243.75 4.405399999999999e-121 145965000.0 7618.099999999999 9199.4 7730.999999999999 8658.6 10197.5 9492.5 9667.1 10417.9 10024.599999999999 9967.8 11296.300000000001 True False 8391.483903851195 9974.665723297101 8255.672150279617 9193.422056892643 9481.262779465182 9415.19622722834 10034.986780540103 10210.106811815549 9603.300923485544 9338.431406884605 9906.926713145644 0.8470319955750166 1.0068375402496492 0.8333232282141592 0.9279792132401423 0.9570337052038911 0.9503649819812617 1.0129263162131334 1.0306028405628167 0.9693521716217791 0.9426163811723071 1.0 13.274221864439832 -7.036314293214954 1.5287326785290716 0.9902013012328645 0.9048765643949969 0.3897246623669942 0.04786460793269295 0.27747781556840323 1.2829134477899637 0.006599618707356363 0.01435126942985036 9.197836954541699e-08 7.036314293214954 -0.08532473683786768 ISRES(ph)SVDCLK ddPTM_A549_PD325901_60min_R1 2 ISRESSVDCLK 11 1 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BRD5;H3BMM1 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 IS(0.109)RES(0.888)S(0.003)VDCLK;IS(0.109)RES(0.887)S(0.004)VDCLK 42.788999999999994 0.020706 15452500.0 4200.1 4783.0 3166.0 2094.8500000000004 2714.0 2388.7 2051.1000000000004 2143.8 2269.0 4204.5 4031.8 True False 4626.491060049799 5186.080195939962 3380.863798704602 2224.244126750462 2523.378002791715 2369.2472191709603 2129.1557329049865 2101.040227221434 2173.6418206600456 3939.027152455543 3535.9141596859654 1.308428556552032 1.4666872445796457 0.9561498515011648 0.6290435871180774 0.7136423252468955 0.6700522445322541 0.6021514201843867 0.5942000094844027 0.6147326327777971 1.1140053108091796 1.0 11.787867535947262 -5.902858185730264 3.959127916664368 0.755515459564995 1.3853165349992804 0.690144681469724 0.16501538590832845 0.09599554608803619 2.8038106936332565 0.024434634821631832 0.08392457354783575 1.250667355744195e-06 5.902858185730264 0.6298010754342854 ISRPGDS(ph)DDSR ddPTM_A549_MK2206_60min_R1 4 ISRPGDSDDSR 11 1 P14866;M0QXS5;A0A3B3ITJ4;P14866-2;M0QYL7;M0R1W6;B4DVF8 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 ISRPGDS(0.997)DDS(0.003)R;ISRPGDS(0.949)DDS(0.051)R;ISRPGDS(0.625)DDS(0.375)R;ISRPGDS(0.995)DDS(0.005)R 143.31 2.2362e-11 84499800.0 8196.74 8808.17 7548.539999999999 7713.24 10300.0 7442.96 6635.47 7354.72 10914.3 10988.2 11828.6 True False 9580.149320947336 9256.46823026408 8619.036478545308 9602.984146260498 8784.8836443275 8230.569086963014 7841.049008085106 8397.274082885364 8442.228476555678 8505.957988363665 8891.232167247781 1.0774827538794103 1.0410782280955053 0.9693860554327726 1.0800509946905408 0.9880389443307945 0.9256949916662371 0.8818855317903872 0.9444443610209632 0.9495003974425416 0.9566680779854864 1.0 13.118167649543613 -6.970889592426028 9.224250755686208 0.9617393922250003 1.036523514808096 0.5460938627665879 0.04013087902071602 0.2472709495620174 72.86320818629116 0.006549204079703139 0.012351565171107831 1.0693266919327708e-07 6.970889592426028 0.07478412258309575 ISRPGDS(ph)DDSR ddPTM_A549_PD325901_60min_R1 4 ISRPGDSDDSR 11 1 P14866;M0QXS5;A0A3B3ITJ4;P14866-2;M0QYL7;M0R1W6;B4DVF8 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 ISRPGDS(1)DDSR;ISRPGDS(0.978)DDS(0.022)R;ISRPGDS(1)DDSR;ISRPGDS(0.741)DDS(0.259)R 149.83 8.9364e-12 97774000.0 11735.5 11791.7 11489.400000000001 11879.300000000001 14206.5 12903.800000000001 13206.8 12662.3 13051.699999999999 13267.7 13990.8 True False 12926.87932078152 12785.427941974745 12269.139775374817 12613.057381152228 13208.684449764369 12798.715731041262 13709.392001038266 12409.740493117808 12503.18243750936 12429.97515772016 12270.020294988444 1.0535336543869747 1.0420054437234154 0.9999282381289959 1.0279573364930694 1.076500619575936 1.043088391326358 1.1173080134706637 1.011387120377171 1.0190025881714433 1.0130362345689883 1.0 13.582850014813916 -8.472212410190565 24.99999250283398 1.0093008112682083 1.0499692990567215 0.3283983616542713 0.027871629709168042 323.56328432676116 159654.05612209396 0.004666811710122161 0.005641851880422713 3.3712238428783586e-09 8.472212410190565 0.040668487788513286 ISS(ph)EKQEAK ddPTM_A549_MK2206_60min_R1 2 ISSEKQEAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 IS(0.124)S(0.876)EKQEAK;IS(0.135)S(0.865)EKQEAK 90.65299999999999 0.00029436 141770000.0 7595.1 7474.8 7683.2 6388.9 6623.7 5279.5 5382.5 5973.5 7112.6 10980.099999999999 11617.8 True False 8876.9671976331 7855.235392547824 8772.793291412545 7954.180786808615 5649.362504362334 5838.173185751533 6360.430577791495 6820.261918076511 5501.6074564882665 8499.687783989357 8732.779625031804 1.0165110742274994 0.8995114648297581 1.0045820080316747 0.9108418084900026 0.6469145846952207 0.6685354991687736 0.7283397555985309 0.7809955376094438 0.6299949950320921 0.9733084022440794 1.0 13.09222521835299 -6.538109958440355 23.501996691097716 0.7879609543372341 0.9647291098175051 0.3644285321098165 0.1169887975570057 130.9246458756606 202018.16213237937 0.021334939592417293 0.04442926267301654 2.8966101060030826e-07 6.538109958440355 0.17676815548027103 ISS(ph)EKQEAK ddPTM_A549_PD325901_60min_R1 3 ISSEKQEAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 IS(0.092)S(0.908)EKQEAK;IS(0.133)S(0.867)EKQEAK;IS(0.165)S(0.835)EKQEAK 113.38 6.6936e-05 290983000.0 24650.0 24055.2 25836.2 24617.2 25774.3 24310.1 21063.3 23285.8 25096.0 25454.1 28376.4 True False 27152.44985362908 26082.41612573174 27589.599897691674 26137.748534282404 23964.002084507916 24112.12660558796 21864.87540778003 22821.346451643276 24041.302393690836 23846.92378197613 24886.282692820303 1.0910608944204658 1.0480639655056447 1.1086267980734335 1.0502873754553608 0.9629402020504064 0.9688922569598678 0.8785914585020788 0.9170251231706549 0.9660463432984612 0.958235670482678 1.0 14.603063128102647 -6.666418734285022 3.9333768649239924 0.9679080019269397 1.079205912110445 0.7320928584258042 0.03543818390473786 0.11764059974122679 3.4297713712305886 0.0059838134306681974 0.01283606923620117 2.1556649764975804e-07 6.666418734285022 0.11129791018350521 ISS(ph)PEDISDSK ddPTM_A549_MK2206_60min_R1 2 ISSPEDISDSK 11 0 Q8N8V4 Q8N8V4 ANKS4B Ankyrin repeat and SAM domain-containing protein 4B 1 IS(0.016)S(0.979)PEDIS(0.005)DSK;IS(0.195)S(0.8)PEDIS(0.004)DSK 96.64 2.4361e-05 1770900.0 1653.4 1198.7 1050.5 1278.2 1614.3 1636.8 1128.8 1358.2 1790.1 1532.7 1710.6 True False 1932.453498251052 1259.7087099383357 1199.476696250115 1591.3590573805784 1376.838608450279 1810.0050895800932 1333.888348576132 1550.7290093130534 1384.6452082022959 1186.4620054936204 1285.8108098417435 1.5029065578387046 0.9796998907587187 0.9328562857530693 1.237630797003831 1.07079408409993 1.407676056015478 1.0373908341463594 1.206032020763549 1.0768654281050234 0.9227345083835848 1.0 10.328462669332492 -9.22442427636607 1.0980542340039192 1.0189412894222993 1.1610810616398644 0.1708773296062428 0.16687919281378383 0.6591783529891496 1.659227048812433 0.038122310238286966 0.03250692794997265 5.964523082586257e-10 9.22442427636607 0.14213977221756502 ISS(ph)PEDISDSKR ddPTM_A549_PD325901_60min_R1 2 ISSPEDISDSKR 12 1 Q8N8V4 Q8N8V4 ANKS4B Ankyrin repeat and SAM domain-containing protein 4B 1 IS(0.045)S(0.951)PEDIS(0.004)DSKR;IS(0.49)S(0.51)PEDISDSKR 131.53 2.7048000000000002e-08 17682600.0 4916.6 5055.2 5804.8 5710.1 6547.8 5544.1 5750.8 6557.0 7250.299999999999 8876.9 9023.900000000001 True False 5415.729612590377 5481.2194452259455 6198.748635098071 6062.799908421994 6087.905116683712 5498.950687740498 5969.649840958506 6426.21549113301 6945.5951045974125 8316.411019058767 7914.017507215189 0.6843211564357635 0.6925963254729639 0.7832619310541944 0.7660837119572398 0.769255957689427 0.6948368111047416 0.7543134489550967 0.8120042045995282 0.8776320115876838 1.0508456686476517 1.0 12.950194541474419 -9.094597206893285 0.5467578877331123 0.9912971943510096 0.7222970275076137 0.8840058157746973 0.039621604961422474 0.16674108251694494 0.1152672991812447 0.01572291733277809 0.011870317659654631 8.042717105646851e-10 9.094597206893285 -0.2690001668433959 ISS(ph)PSDKK ddPTM_A549_MK2206_60min_R1 2 ISSPSDKK 8 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 IS(0.029)S(0.878)PS(0.092)DKK;IS(0.394)S(0.593)PS(0.013)DKK 66.19 0.0035954 26612000.0 7646.1 6347.6 5423.9 3541.6 6480.0 5250.6 6987.9 6554.5 5970.9 9398.7 9775.0 True False 8936.574750802816 6670.6657272082975 6193.09057857306 4409.292158988465 5526.800584004097 5806.215006933798 8257.510977157299 7483.620447314389 4618.500683568004 7275.527142319364 7347.597723724447 1.2162580324651915 0.907870296936586 0.8428728424497667 0.600099831915325 0.7521915041917401 0.7902195010195342 1.1238381968700952 1.0185125436509326 0.6285728828968766 0.9901912728329729 1.0 12.843056926642822 ISS(ph)PSDKK ddPTM_A549_PD325901_60min_R1 1 ISSPSDKK 8 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 IS(0.107)S(0.843)PS(0.05)DKK 61.765 0.0044667000000000005 19482000.0 4320.0 4655.2 3402.0 3311.6 3689.0 2989.1 2697.9 2898.4 3721.8 4942.5 5179.7 True False 4758.563219784089 5047.510041425821 3632.880177887888 3516.1500108107152 3429.897366359115 2964.7577606329482 2800.570060847528 2840.5891382491855 3565.3856889081358 4630.429706507675 4542.629736823602 1.0475349071948523 1.1111427375446306 0.7997306380572744 0.7740340319414533 0.7550466503038048 0.6526523032682896 0.6165085474929781 0.6253182193615113 0.7848726168470873 1.0193280048717919 1.0 12.14931200286374 -5.76294058426358 24.997295376052804 0.8203522916634636 1.0793388840188392 0.40987348882980057 0.13132048102800584 35.0076177460478 582982.9977444063 0.02175558070834207 0.07336679301624019 1.7260740196599227e-06 5.76294058426358 0.2589865923553756 ISS(ph)TPTTETIR ddPTM_A549_MK2206_60min_R1 2 ISSTPTTETIR 11 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 ISS(0.5)T(0.5)PTTETIR;IS(0.003)S(0.494)T(0.494)PT(0.009)TETIR 220.29 6.222699999999999e-32 27908000.0 5384.2 5525.4 4775.3 4572.700000000001 6410.4 4694.5 5233.5 4764.700000000001 7628.700000000001 7063.0 7090.5 True False 6292.921328948417 5806.619259108438 5452.509345647951 5693.011705276308 5467.438651805529 5191.268874043102 6184.359206478729 5440.1108162817745 5900.811630530618 5467.463394533462 5329.733162155316 1.180719772920788 1.0894765427168727 1.0230360845012707 1.0681607375206912 1.0258372202623602 0.9740204089211439 1.1603506251291964 1.020709789921607 1.107149542200413 1.0258418626576136 1.0 12.379847589640551 -11.006292714383054 1.2715738616349452 0.9997845707675606 1.0721147487048555 0.1262190454401766 0.059131114555598635 0.65767199365156 1.8837522033055973 0.04122710817399357 0.009251525965421808 9.856149574509598e-12 11.006292714383054 0.0723301779372949 ISS(ph)TSSLVK ddPTM_A549_PD325901_60min_R1 2 ISSTSSLVK 9 0 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1;A6H8Y1-4;A6H8Y1-3;A0A0G2JN16;A0A0A0MRX7 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 1 IS(0.012)S(0.969)T(0.017)SS(0.001)LVK;IS(0.026)S(0.954)T(0.018)S(0.001)S(0.001)LVK 112.13 0.0002917 9423200.0 4416.0 4338.5 4660.5 4837.3 5380.4 5196.7 5333.7 5665.5 6655.7 8351.8 8389.8 True False 4864.309069112618 4704.120620967077 4976.789555863171 5136.089034694612 5002.499265372343 5154.379798160392 5536.676872212633 5552.49715800123 6375.984074820218 7824.4659226728945 7357.9077873241 0.661099487750125 0.639328564170258 0.6763865081914968 0.6980366135524088 0.6798806685224354 0.70052247828386 0.7524797853203584 0.7546298918786183 0.8665485161154778 1.0634090761714303 1.0 12.845079880570168 -8.899497345827399 0.47028705667694876 0.9976715537598734 0.6505656604408853 0.9516412263287698 0.02999367981605785 0.08597894511448165 0.046420271677558377 0.009767568382322699 0.008296253669135287 1.2603833406510723e-09 8.899497345827399 -0.3471058933189881 ISS(ph)VPNSLSK ddPTM_A549_MK2206_60min_R1 2 ISSVPNSLSK 10 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 ISS(0.999)VPNS(0.001)LSK;ISS(1)VPNSLSK 169.52 2.0665e-10 16931900.0 6334.9 7751.6 7115.4 6082.5 9662.5 8302.6 8601.0 8637.0 12172.1 12307.7 12463.900000000001 True False 7404.07624656501 8146.123330239429 8124.470713467935 7572.712773053798 8241.15904983635 9181.175621180168 10163.690366852696 9861.32119970317 9415.138784849543 9527.382021931113 9368.769643859765 0.7902933392558751 0.8694976651046543 0.8671865167260958 0.8082931976043309 0.8796415498632262 0.9799766639792936 1.0848479312877457 1.052573771644201 1.0049493308889463 1.0169299047901452 1.0 13.193643882679954 -7.236116052004647 3.034864506334171 1.0131341341016529 0.8394775221213101 0.8780936429440404 0.033727544447618565 0.07363897793954018 1.3733860815156984 0.005342853119467776 0.009406146942565103 5.806092466100058e-08 7.236116052004647 -0.17365661198034277 ISS(ph)VPNSLSK ddPTM_A549_PD325901_60min_R1 2 ISSVPNSLSK 10 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 IS(0.005)S(0.995)VPNSLSK;IS(0.018)S(0.982)VPNSLSK 197.07 2.8497000000000003e-19 31419000.0 10986.2 10813.5 11024.8 13261.8 15157.599999999999 15187.7 12730.3 13375.8 16597.7 12275.8 13739.2 True False 12101.510936387023 11724.791594981552 11773.009225508058 14080.951266266919 14092.98246688124 15064.016406665894 13214.758532787459 13109.009175887884 15900.15638905653 11500.703892998867 12049.365499964648 1.004327649984767 0.973062987840808 0.9770646616655956 1.1686052071628361 1.1696036996240664 1.2501916724752098 1.0967182075127715 1.0879418651485298 1.3195845365553216 0.954465518788737 1.0 13.556669558024977 -6.259961066710172 24.324476466390085 1.1549314129783703 0.9836428766221271 0.2773462895411596 0.09965266078575793 86.08419245582651 1416416.094261282 0.016138322964241635 0.04032885977770594 5.495901408735663e-07 6.259961066710172 -0.1712885363562432 ISS(ph)VSEVMK ddPTM_A549_MK2206_60min_R1 1 ISSVSEVMK 9 0 B9A067;Q16891-3;Q16891-2;Q16891-4;Q16891;D6RAW4;A0A087WYS0;H7C463;C9J406 B9A067 IMMT MICOS complex subunit MIC60 1 IS(0.122)S(0.876)VS(0.002)EVMK 61.353 0.0076712 1177200.0 1170.7 1123.3 1161.1 1047.2 1203.0 1099.3 1014.4 1105.5 1501.5 1362.4 1131.1 True False 1368.2855391330024 1180.4711719977752 1325.7614393298509 1303.764047010595 1026.0402936044632 1215.6271963437182 1198.7033493937176 1262.2080104517602 1161.4126474027962 1054.632893772107 850.2166532281044 1.6093374952582886 1.388435721078574 1.5593218908335857 1.5334492003425961 1.206798631512087 1.4297852103087163 1.4098798757263553 1.4845722036370448 1.3660196409857912 1.2404284128849683 1.0 9.7316867071549 -12.614634930832272 0.21628195175128873 0.26724342038770993 1.5213540239357 0.4676391371534163 0.12377184892628132 5.987761830276889 0.1794814871664384 2.123811147760243 0.08205542143667537 2.4286507679574543e-13 12.614634930832272 1.25411060354799 ISSCS(ph)DESSNSNSSR ddPTM_A549_PD325901_60min_R1 2 ISSCSDESSNSNSSR 15 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 IS(0.018)S(0.117)CS(0.862)DES(0.001)S(0.001)NS(0.001)NS(0.001)S(0.001)R;IS(0.005)S(0.027)CS(0.964)DES(0.001)S(0.002)NSNSSR 67.115 0.0031088 2977800.0 624.14 994.09 781.3499999999999 532.0699999999999 956.59 852.91 899.8299999999999 757.73 775.91 887.52 877.64 True False 687.5022333324167 1077.8654530591587 834.3771096392427 564.9347554813558 889.4024184563473 845.9641837414093 934.0735230558697 742.6164807223147 743.3012009997079 831.4818357348888 769.6958438183426 0.8932128695431483 1.4003784244332593 1.084034838359041 0.7339714252305188 1.1555245173783957 1.099088933031925 1.2135618641541246 0.9648180988457838 0.9657076973578357 1.0802732565243374 1.0 9.588144646876504 ISSGKSS(ph)PFK ddPTM_A549_MK2206_60min_R1 2 ISSGKSSPFK 10 1 O95810 O95810 SDPR Serum deprivation-response protein 1 IS(0.002)S(0.01)GKS(0.037)S(0.951)PFK;IS(0.022)S(0.063)GKS(0.193)S(0.722)PFK 56.205 0.004365 93889000.0 8880.8 10708.900000000001 11174.8 10579.9 14117.599999999999 9829.099999999999 9989.7 8799.2 16652.3 15865.7 15941.3 True False 10379.661925286036 11253.937268589842 12759.554674208268 13171.975974949759 12040.919741471635 10869.208837971464 11804.69918122874 10046.513546419836 12880.58063825881 12281.627350792804 11982.635252502154 0.8662253090878826 0.9391871680513558 1.0648371084769421 1.0992553555528826 1.0048640793733006 0.9070800044340672 0.9851505059176145 0.8384227120926486 1.074937220973087 1.024952115456257 1.0 13.548657603838716 -5.530406242360719 4.4622217461065325 1.0146522342572604 0.8786201091426247 0.21637356045216638 0.07231776145629439 0.1868186022872345 9.167913612132024 0.010575569595663773 0.05323059590421251 2.948449933847897e-06 5.530406242360719 -0.1360321251146357 ISSGKSS(ph)PFK ddPTM_A549_PD325901_60min_R1 1 ISSGKSSPFK 10 1 O95810 O95810 SDPR Serum deprivation-response protein 1 IS(0.017)S(0.015)GKS(0.145)S(0.823)PFK 51.135 0.0071885000000000004 99545000.0 4865.5 4723.3 5023.6 5970.6 6256.1 6358.4 5520.6 6498.5 5913.0 5251.7 6415.4 True False 5359.441978208208 5121.3490674227905 5364.531705360846 6339.390401783566 5816.693118373337 6306.619298520803 5730.689453988236 6368.8823195253735 5664.497173011395 4920.10676573927 5626.346470571296 0.9525616679031167 0.9102441689665037 0.9534662917436961 1.1267330291409992 1.0338313057678998 1.1209084494720838 1.018545424453099 1.1319747820078134 1.006780723981299 0.874476321619007 1.0 12.45798268125076 -6.023135301811021 23.710933049321397 1.0310946832886225 0.9315159613526316 0.28554659363210644 0.07041290118438055 300.4235692171477 307899.88171584724 0.0078682411109421 0.020999079253071522 9.481230353043929e-07 6.023135301811021 -0.09957872193599093 ISSGKSS(ph)PFKVS(ph)PLTFGR ddPTM_A549_PD325901_60min_R1 1 ISSGKSSPFKVSPLTFGR 18 2 O95810 O95810 SDPR Serum deprivation-response protein 2 IS(0.117)S(0.117)GKS(0.153)S(0.623)PFKVS(0.795)PLT(0.196)FGR 42.38399999999999 0.024045 5749000.0 1410.3 1538.3 1397.0 1855.8 1200.8 2190.1 1673.1 2128.0 2225.3 1926.1 1676.6 True False 1553.4726177920131 1667.93793966432 1491.8088208434406 1970.4285511724013 1116.4599505351105 2172.2645517253395 1736.7707360554502 2085.5553706162937 2131.778379689204 1804.485717289717 1470.388828843071 1.056504638310068 1.1343516129517146 1.014567569870089 1.3400731238707593 0.7592957241205115 1.4773402171686227 1.1811642621237632 1.4183699778630983 1.449805886628319 1.2272166939064135 1.0 10.521981995687632 -7.281789308841513 24.99078421624432 1.2484721429577024 1.077964952018237 0.2663147789714422 0.18251071688650136 1315.536573758561 1615545.2528195204 0.03211541460091303 0.05137707996142033 5.2264968280373684e-08 7.281789308841513 -0.17050719093946531 ISSKT(ph)GIPLNVLPK ddPTM_A549_PD325901_60min_R1 1 ISSKTGIPLNVLPK 14 1 Q96GA3 Q96GA3 LTV1 Protein LTV1 homolog 1 IS(0.317)S(0.317)KT(0.365)GIPLNVLPK 93.765 2.2308e-05 4056200.0 2443.0 2464.6 2796.9 2521.4 3373.6 3360.5 2380.6 3154.3 2723.9 3200.6 3879.3 True False 2691.0115615584546 2672.300491514453 2986.7144531259955 2677.1411514851234 3136.649974288182 3333.1332021702237 2471.195035714304 3091.38501199952 2609.423955617409 2998.5135697821856 3402.170692908817 0.7909690031624106 0.7854692585190859 0.877884951319826 0.7868920736590669 0.9219554976550522 0.979707810991821 0.7263583337735064 0.908650767712193 0.7669879589099574 0.8813530655684095 1.0 11.73223981003592 -10.95737678907227 1.1872391656792163 1.0011383220034262 0.8348333236371452 0.14068713520618825 0.08051479758069868 0.3865332684091462 0.9575795426914708 0.05301757112299074 0.011970825225497311 1.103121148951243e-11 10.95737678907227 -0.166304998366281 ISSLLEEQFQQGK ddPTM_A549_MK2206_60min_R1 2 ISSLLEEQFQQGK 13 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 ; 176.78 1.263e-21 5521700.0 3493.3999999999996 4220.4 4199.8 4121.6 5819.0 4720.0 4154.0 4645.4 5571.3 6076.7 6244.200000000001 False True 4083.000514570112 4435.20033321411 4795.394791919307 5131.392185025653 4963.032808382687 5219.467267117575 4908.72802975306 5303.8996759408465 4309.409445537932 4703.96924954856 4693.59280884708 0.8699094022118736 0.9449478286344059 1.0216895643099542 1.0932759602310096 1.0574059170679937 1.1120409203966863 1.0458359362790197 1.1300297856992159 0.9181472746027327 1.0022107671295901 1.0 12.196476971402078 -4.00814784755909 15.92615806654302 0.9964306294036873 1.0152916038613788 0.0 0.08102912475145455 0.0 0.0 0.011809419918157309 0.0 9.814137818938153e-05 4.00814784755909 0.018860974457691526 ISSLLEEQFQQGK ddPTM_A549_PD325901_60min_R1 2 ISSLLEEQFQQGK 13 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 ; 209.19 7.2282e-37 7746300.0 8957.7 9112.1 9358.7 9303.900000000001 10561.0 10555.6 10028.2 10101.7 10264.9 10308.7 9911.6 False True 9867.079109689797 9880.008645917727 9993.837660434863 9878.580772310004 9819.231793472101 10469.638693298026 10409.828638641595 9900.213668869657 9833.501950151303 9657.806922706248 8692.536034809129 1.1351208749871418 1.1366083046827051 1.1497033340344742 1.1364440403527092 1.1296164610823742 1.204440068050626 1.1975594460529808 1.138932715288657 1.131258117397868 1.1110459460888866 1.0 13.085561427303247 -10.281681864246966 0.661505442762405 0.9971096173414878 1.1545725920215888 0.37545556781372524 0.03972558920224044 0.24134301031231284 0.1921940920366379 0.019744766824683298 0.005889679175173739 5.227790024996202e-11 10.281681864246966 0.15746297468010095 ISSLPVSRPIS(ph)PSPSAILER ddPTM_A549_MK2206_60min_R1 2 ISSLPVSRPISPSPSAILER 20 1 Q5T5P2;Q5T5P2-3;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-10;Q5T5P0;Q5T5P1 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 IS(0.003)S(0.008)LPVS(0.196)RPIS(0.754)PS(0.032)PS(0.007)AILER;ISSLPVS(0.007)RPIS(0.683)PS(0.256)PS(0.054)AILER 85.573 1.2060999999999999e-05 40833000.0 1924.14 2109.8 2055.3 1916.25 2114.0 1936.79 1596.04 1636.12 2569.4 2187.8500000000004 2453.1 True False 2248.8877912935645 2217.179808315593 2346.772445314481 2385.7313360237304 1803.0334003988655 2141.739832262848 1886.01980852361 1868.0450204073568 1987.435002488677 1693.6131654721835 1843.9275678842403 1.2196182922054708 1.202422398217968 1.272703161549461 1.2938313725420174 0.9778222484453131 1.16150974125319 1.0228274913681492 1.0130793925657229 1.0778270454349246 0.918481395348663 1.0 10.84856627041492 -6.7588971707819505 24.999999825725297 1.0408465368210122 1.2457751075429224 0.7419272679665425 0.06269319643233555 23.13101293775935 227464.78252186792 0.007507869386234413 0.01507862241558299 1.742219335101281e-07 6.7588971707819505 0.20492857072191017 ISSLPVSRPIS(ph)PSPSAILER ddPTM_A549_PD325901_60min_R1 3 ISSLPVSRPISPSPSAILER 20 1 Q5T5P2;Q5T5P2-3;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-10;Q5T5P0;Q5T5P1 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 ISSLPVSRPIS(0.807)PS(0.183)PS(0.01)AILER;ISSLPVS(0.005)RPIS(0.954)PS(0.033)PS(0.007)AILER;IS(0.002)S(0.002)LPVS(0.011)RPIS(0.974)PS(0.01)PS(0.002)AILER 119.76 6.8926e-15 79436600.0 3637.4 3734.5 3770.6000000000004 3479.8 4027.1 3874.9999999999995 4348.0 4186.0 3869.5 4143.8 4087.4 True False 4006.6661702876468 4049.219421228889 4026.495590459752 3694.7393428008018 3744.250388740793 3843.4432847521543 4513.465519316892 4102.5069461465255 3706.8783715487216 3882.1597608146685 3584.6757121634046 1.117720678802927 1.1295915576098585 1.1232523982008131 1.0307039295811147 1.0445157914943115 1.0721871637400024 1.2591000920953457 1.1444569259713042 1.0340902969188155 1.082987715636829 1.0 11.807626896025807 -8.884144208629953 4.974536771156925 1.0147202012844976 1.1139400908266888 0.2145047334892244 0.06091562197741997 0.1749481219078477 6.799793437611073 0.010919233086872523 0.011537860675182253 1.3057372426385912e-09 8.884144208629953 0.09921988954219119 ISSPT(ph)ETER ddPTM_A549_PD325901_60min_R1 1 ISSPTETER 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 1 IS(0.457)S(0.086)PT(0.457)ET(0.001)ER 105.52 0.00059847 20831000.0 1654.2 1855.7 1929.2 1777.6 1844.8 1598.0 1764.4 2079.9 1882.2 2247.1 2035.2 True False 1822.133166242322 2012.0863515797173 2060.127113222022 1887.3983147774886 1715.2276122145006 1584.9864178152113 1831.545207516728 2038.4147628500139 1803.0976795268132 2105.217722507514 1784.883302195764 1.020869635567061 1.127292943524346 1.1542082951236383 1.0574351345298658 0.960974653135265 0.88800562807964 1.0261428325670146 1.1420437181200336 1.0102048001169834 1.179470792246011 1.0 10.801614036873268 -6.52859122480413 8.581760279474256 1.0056976694928546 1.103910053492987 0.08174768804066634 0.08261805405668625 0.11172683122258407 80.65772347159461 0.009263804412122599 0.019823678420630608 2.9607979759468367e-07 6.52859122480413 0.09821238400013255 ISSPTETER ddPTM_A549_MK2206_60min_R1 1 ISSPTETER 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 129.42 0.00013949 11011000.0 3880.3 5092.8 4565.3 4142.2 4950.4 4091.0 3637.4 4099.9 5023.3 5579.9 5385.7 False True 4535.19977577329 5352.00176689243 5212.728187901618 5157.039185950425 4222.202717755227 4523.906904613983 4298.268496731774 4681.073380417162 3885.53057056175 4319.396714591144 4048.282052241717 1.1202776183200833 1.3220427079503476 1.287639576648345 1.2738833706250134 1.0429615978504272 1.1174880717881035 1.0617512419500583 1.1563110771456846 0.9597973956409871 1.0669702997100459 1.0 11.983094093764159 -7.411962630523936 0.6241047457076891 0.9829594508265637 1.2676202836711532 0.500553117333539 0.08125469813359594 0.3512278997959703 0.26665251463975675 0.016560756199143205 0.04335041618767532 3.872909684809267e-08 7.411962630523936 0.28466083284458954 ISSPTETER ddPTM_A549_PD325901_60min_R1 2 ISSPTETER 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 ; 99.7 8.876e-05 17280000.0 5876.6 5197.1 5492.6 5657.5 6473.6 5249.3 5932.6 5152.6 5095.2 5602.6 5990.5 False True 6473.1881058757335 5635.077856224037 5865.360865686954 6006.950925885257 6018.916668707604 5206.551441199869 6158.368339443283 5049.827350863496 4881.066463035291 5248.850879854303 5253.706476908273 1.2321183405139733 1.0725909186194573 1.1164234034518485 1.1433739117873705 1.1456514929341173 0.9910244251528583 1.1721949763488482 0.9611932781283288 0.9290710252826545 0.9990757768681383 1.0 12.35911988442217 -8.273280654600297 24.452383852979516 0.9651714513146445 1.118815251680633 0.5997765251155625 0.05966939516566989 273.9118506612327 565630.3510241094 0.0094966054224824 0.0115295635859334 5.329903492322584e-09 8.273280654600297 0.15364380036598835 ISST(ph)PTTETIR ddPTM_A549_PD325901_60min_R1 1 ISSTPTTETIR 11 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 IS(0.002)S(0.088)T(0.91)PT(0.001)T(0.001)ETIR 142.19 3.146e-11 16973000.0 6493.8 8127.3 6516.8 8391.2 8773.2 6873.5 7028.9 6870.8 7925.4 7453.3 7977.9 True False 7153.045795517107 8812.216093761828 6959.069236701885 8909.505366202102 8157.000697896925 6817.524494901665 7296.388635861663 6733.756503961676 7592.322999320901 6982.697366011861 6996.6688760748775 1.0223501958163206 1.2594873717541812 0.9946260656265206 1.273392456325634 1.1658406082056854 0.974395761133445 1.0428374938267664 0.9624232078479187 1.0851339592878066 0.9980031197259038 1.0 12.772452501032696 -7.249306429071411 24.699183102993036 1.030763361521888 1.1485886716512341 0.35972592689025296 0.08569609361005133 582.3710309944369 1185539.187481465 0.011670611074393574 0.020110029855894482 5.6324010519387625e-08 7.249306429071411 0.11782531012934605 ISSTLYQAAAPVLT(ph)PAK ddPTM_A549_MK2206_60min_R1 4 ISSTLYQAAAPVLTPAK 17 0 A0A6I8PRU6;A0A6I8PLD9;Q8N6L1;Q8N6L1-2 A0A6I8PRU6 KRTCAP2 Keratinocyte-associated protein 2 1 ISSTLYQAAAPVLT(1)PAK;ISSTLYQAAAPVLT(1)PAK;ISSTLYQAAAPVLT(1)PAK;ISSTLYQAAAPVLT(1)PAK 202.6 2.2734999999999997e-48 36836500.0 7476.119999999999 8574.6 8237.5 7640.2 10052.800000000001 7863.1 8024.5 8270.4 11736.300000000001 10778.6 10786.1 True False 8737.906282414813 9011.010514922218 9405.701366359184 9512.049342981609 8574.046436863631 8695.168022896649 9482.447779189559 9442.754527037754 9078.046789019945 8343.70677393719 8107.613688784076 1.077740827057741 1.1114257364516373 1.160107243315115 1.1732242936217352 1.0575302136959004 1.0724694536106703 1.1695732114502944 1.164677411813625 1.1196940477786144 1.0291199228547017 1.0 12.985061633635492 -10.474168843559712 0.7992610376369332 0.9995636942556055 1.1240188820500459 0.5142758494928048 0.04013677387055325 0.38338522999442926 0.4405428992552546 0.028010567092971193 0.008063260860133169 3.35607112663059e-11 10.474168843559712 0.12445518779444031 ISSTLYQAAAPVLT(ph)PAK ddPTM_A549_PD325901_60min_R1 4 ISSTLYQAAAPVLTPAK 17 0 A0A6I8PRU6;A0A6I8PLD9;Q8N6L1;Q8N6L1-2 A0A6I8PRU6 KRTCAP2 Keratinocyte-associated protein 2 1 ISSTLYQAAAPVLT(1)PAK;ISSTLYQAAAPVLT(1)PAK;ISSTLYQAAAPVLT(1)PAK;ISSTLYQAAAPVLT(1)PAK 182.17 3.9706999999999994e-39 73855100.0 9013.5 9662.400000000001 10048.6 10494.2 12568.8 10386.5 11091.2 11209.9 11183.900000000001 11332.500000000002 11645.3 True False 9928.543884612 10476.68435819575 10730.55842314058 11142.402899942565 11686.010848006083 10301.915787633106 11513.281685337513 10986.30975050357 10713.879576059899 10616.964015983453 10213.001925638913 0.9721474603551377 1.0258183083168606 1.0506762361615132 1.0910017427853866 1.1442287912106723 1.0087059478341018 1.1273161181370537 1.0757179750376165 1.0490431367846482 1.0395537074491707 1.0 13.318119361992478 -9.996285332302074 0.8969550684686319 1.0051025600938643 1.0633193774734049 0.07972218232093176 0.0484467082839166 0.6424662617935838 1.0472017936101037 0.01900234113552964 0.009410070699016016 1.0085900227826642e-10 9.996285332302074 0.05821681737954054 ISSTPPS(ph)GSR ddPTM_A549_PD325901_60min_R1 1 ISSTPPSGSR 10 0 Q3Y452 Q3Y452 TDRG1 Testis development-related protein 1 1 IS(0.001)S(0.18)T(0.18)PPS(0.319)GS(0.319)R 72.2 0.0022524 71609000.0 7153.5 7664.6 6984.4 8225.4 8988.4 7613.0 8276.6 7874.8 8489.7 8488.2 8915.7 True False 7879.718053871631 8310.522740916036 7458.403384609102 8733.464276761226 8357.085792296622 7551.002252082109 8591.570542129306 7717.7309363389095 8132.907432727013 7952.253603394727 7819.125421278879 1.0077492851601864 1.0628455604893963 0.9538667028299467 1.1169362052940186 1.0688005808876968 0.9657093146930343 1.0987891969028023 0.9870325030643408 1.0401300650062744 1.0170259683715464 1.0 12.932791534017559 -11.12681210064623 0.5402079505092763 0.9880965269787229 1.0356319334835073 0.03171302177382085 0.04991549992529515 4.475995391027024 1.3969777487331172 0.11628753903862422 0.010144091740093661 7.467717825123632e-12 11.12681210064623 0.047535406504784494 ISSTPPSGS(ph)R ddPTM_A549_PD325901_60min_R1 1 ISSTPPSGSR 10 0 Q3Y452 Q3Y452 TDRG1 Testis development-related protein 1 1 ISS(0.045)T(0.045)PPS(0.081)GS(0.829)R 70.028 0.0033155000000000003 68559000.0 6920.8 6919.9 6883.8 6260.4 7264.8 7196.4 6230.1 6710.8 7821.2 8165.0 8044.9 True False 7623.394521176317 7503.064258391165 7350.976063652161 6647.090689600014 6754.545510199423 7137.794904358817 6467.189864741528 6576.947829479243 7492.5021629556395 7649.460506552381 7055.42830082287 1.0805006012586371 1.063445610738626 1.0418894148204754 0.9421243340853975 0.9573544258697441 1.0116742173577669 0.9166261194925989 0.932182647042445 1.061948593834026 1.0841950595203738 1.0 12.784517949159708 -6.013731968893922 13.200697993582583 1.0033928121245896 1.067162226769244 0.26916487850107296 0.051081317648295516 1.7004397632836719 1639.7875400648056 0.007610784327917906 0.021342642115349277 9.68875627354379e-07 6.013731968893922 0.06376941464465435 IST(ph)PLTGVR ddPTM_A549_MK2206_60min_R1 1 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.038)T(0.962)PLTGVR 120.22 0.00015082 21436000.0 2626.0 2482.9 2138.6 1917.7 3424.9 3317.5 2486.9 2597.2 4163.6 3605.7 4062.5 True False 3069.20460046405 2609.2690046766447 2441.885637887192 2387.536586088824 2921.1017469375943 3668.555648021728 2938.737539044991 2965.3610535914167 3220.5512479029558 2791.1698657325937 3053.669130703895 1.005087476440702 0.8544701121811411 0.7996562605079346 0.7818583100843273 0.9565875089631132 1.20135990213717 0.9623627882591159 0.971081321082051 1.0546497050126034 0.9140380788697978 1.0 11.576328037251287 -6.992101151530424 16.959134861565975 1.0295899034525087 0.8572335581219568 0.4116753225766562 0.08695267435507802 2.3338753761323 5006.8102422864085 0.011219758329353539 0.021097136613709475 1.0183541755533799e-07 6.992101151530424 -0.17235634533055189 IST(ph)PLTGVR ddPTM_A549_PD325901_60min_R1 4 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.023)T(0.976)PLT(0.001)GVR;IS(0.155)T(0.845)PLTGVR;IS(0.098)T(0.902)PLTGVR;IS(0.05)T(0.949)PLT(0.001)GVR 122.57 0.00011833 67636000.0 10061.2 10982.0 10741.3 10522.599999999999 11968.3 11724.5 12004.6 10911.4 11574.0 12446.2 14164.5 True False 11082.605617336023 11907.491681332345 11470.269210684059 11172.557103441493 11127.687896393536 11629.019559245584 12461.441622169183 10693.76356717229 11087.585029669182 11660.344807918216 12422.356296163474 0.8921500360409707 0.9585533853194872 0.9233569652342479 0.89939113297628 0.8957791606597386 0.9361363723593321 1.0031463697445049 0.8608482410438474 0.8925508788613217 0.9386580556797749 1.0 13.600651232203303 -10.865819722211514 1.114113033252397 0.9999990071525918 0.9176997264279323 0.13744092119506834 0.04045252837691963 0.4051317393198763 0.8929982101326817 0.0257105021403458 0.006237580543063516 1.3620099422035088e-11 10.865819722211514 -0.08229928072465953 IST(ph)PQTNTVPIKPLISTPPVSSQPK ddPTM_A549_MK2206_60min_R1 1 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 IS(0.347)T(0.628)PQT(0.012)NT(0.012)VPIKPLISTPPVSSQPK 85.191 3.6082e-07 10607000.0 892.1 1148.1 1291.1 1051.7 1755.0 1257.3 969.47 687.26 1904.5 1600.8 1367.3 True False 1042.6646702490402 1206.5333860684102 1474.1973941252 1309.3665472126079 1496.8418248344417 1390.3466514718052 1145.6101499770582 784.6812096454789 1473.1337908615556 1239.178168196116 1027.7616744397374 1.0145004393332986 1.1739427691017243 1.434376695286704 1.2739982233005347 1.4564094595669892 1.3527909106259712 1.114665178190813 0.7634855717627643 1.4333418218426985 1.2057057574866545 1.0 10.005290044363164 -7.764220062467008 24.99691000106024 1.1635929671975638 1.2934901212695695 0.1481636920779862 0.19216364825429527 165.38512932272226 1486732.0737308862 0.035244061086176316 0.04987072875423695 1.720996303573277e-08 7.764220062467008 0.12989715407200575 IST(ph)PQTNTVPIKPLISTPPVSSQPK ddPTM_A549_PD325901_60min_R1 1 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 IS(0.467)T(0.528)PQT(0.004)NT(0.001)VPIKPLISTPPVSSQPK 123.31 1.1422e-17 18960000.0 1819.0 2518.6 2765.1 2817.3 3049.0 2631.4 2785.0 2666.6 2598.7 2628.8 2154.3 True False 2003.6635409229739 2730.8512610274697 2952.756313897061 2991.3182224474676 2834.8487584789737 2609.9707508378897 2890.9846990104743 2613.4125710927674 2489.4856762226796 2462.817119366185 1889.3347572328687 1.0605127192269261 1.4454036006975763 1.5628550221675306 1.5832653324118011 1.500448106205864 1.3814231389361984 1.530160120086198 1.3832448490601992 1.3176519760155132 1.303536660159284 1.0 10.883662629486219 -9.907180286640733 0.5949073871348314 1.002136489839865 1.4522367091241244 0.2434885344093789 0.1597719545576166 0.4040701489328558 0.2899155333160463 0.08352952908567052 0.03309640297487994 1.2382824374123722e-10 9.907180286640733 0.45010021928425936 ISTAS(ph)GDGR ddPTM_A549_MK2206_60min_R1 2 ISTASGDGR 9 0 A0A0A0MR13;A0A590UJY2;A0A590UJF0;B0AZR9;A0A590UJ58;P63092-3;P63092-2;P63092;P63092-4;Q5JWF2-2;Q5JWF2 A0A0A0MR13 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas 1 ISTAS(1)GDGR;ISTAS(1)GDGR 130.53 4.9433999999999995e-05 281980000.0 8691.2 8501.8 7315.6 7422.2 9362.1 7262.6 7704.6 8680.5 10133.3 11050.0 11023.8 True False 10158.062080560987 8934.50530587615 8353.06208385278 9240.639333195213 7984.947491898876 8031.12351147629 9104.426090042232 9910.987457916326 7838.123729554953 8553.797325441707 8286.286218597812 1.2258883910818994 1.0782279383282065 1.0080585998954628 1.1151725983656517 0.9636340431950554 0.969206626419827 1.09873420370252 1.1960710982529206 0.9459151570172655 1.032283594820016 1.0 13.016509938314966 -2.0000000000000004 0.5468340308798549 0.9984802401455303 10.199748766495716 0.2487640529498545 0.07772444603932661 96.91257602135597 0.8102260261938551 0.01454623349666004 1051.1974462729263 0.00999999999999999 2.0000000000000004 9.201268526350185 ISTAS(ph)GDGR ddPTM_A549_PD325901_60min_R1 2 ISTASGDGR 9 0 A0A0A0MR13;A0A590UJY2;A0A590UJF0;B0AZR9;A0A590UJ58;P63092-3;P63092-2;P63092;P63092-4;Q5JWF2-2;Q5JWF2 A0A0A0MR13 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas 1 ISTAS(1)GDGR;ISTAS(1)GDGR 116.13 0.00019579 381610000.0 14217.2 14271.800000000001 14190.2 13329.9 15434.1 13972.3 13910.2 14961.5 14902.1 14725.6 15099.2 True False 15660.519677850532 15474.534672886455 15153.232304604564 14153.257648600606 14350.062060754457 13858.514221301295 14439.560272953502 14663.081145430306 14275.816560448699 13795.823102913377 13242.094121714961 1.1826316543219348 1.1685866699520464 1.144322957179079 1.0688081143745594 1.083670145284846 1.0465500466860074 1.090428760000647 1.1073083313450514 1.0780633659021193 1.0418158167513993 1.0 13.69284366937691 -2.0000000000000004 0.09838259220827644 0.9561955995707476 1.5715935555767901 0.7147952685722888 0.02830659249257517 44.92598512930955 0.3042536742538914 0.21590585392001388 3.7457575839232415 0.00999999999999999 2.0000000000000004 0.6153979560060425 ISTKNEEPVRS(ph)PERR ddPTM_A549_MK2206_60min_R1 4 ISTKNEEPVRSPERR 15 3 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 ISTKNEEPVRS(1)PERR;ISTKNEEPVRS(1)PERR;ISTKNEEPVRS(1)PERR;ISTKNEEPVRS(1)PERR 106.49 1.3671e-06 265581000.0 9223.66 12504.5 10707.0 9730.699999999999 14779.199999999999 8957.000000000002 9617.4 6798.42 17592.9 17236.8 18426.2 True False 10780.38831116384 13140.925638962142 12225.413599952391 12114.721936827715 12605.199257887862 9904.8237948246 11364.757090357987 7762.1168542880605 13608.13624008835 13342.994908522487 13850.466002751045 0.7783411987020934 0.9487713724832095 0.8826716442265641 0.8746797352826563 0.910092068771127 0.7151256710681978 0.8205324707559056 0.5604227939151153 0.9825038549161766 0.963360720561477 1.0 13.757646896513299 -8.950962889698772 24.99993295214692 0.9922819757847056 0.8177096121723549 0.35916660129418077 0.1010630691184449 82.63846252725915 42130.527142981766 0.017365444373233035 0.018483706850252857 1.119533543103058e-09 8.950962889698772 -0.17457236361235062 ISTKNEEPVRS(ph)PERR ddPTM_A549_PD325901_60min_R1 3 ISTKNEEPVRSPERR 15 3 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 ISTKNEEPVRS(1)PERR;ISTKNEEPVRS(1)PERR;ISTKNEEPVRS(1)PERR 137.61 1.3640000000000001e-10 285826000.0 11498.1 11130.599999999999 12373.8 13104.1 12812.8 20455.3 15713.6 17406.7 15377.6 15514.9 17145.8 True False 12665.37864754615 12068.614724844101 13213.56047770405 13913.510495429611 11912.87312976038 20288.718818733098 16311.589646811854 17059.50971320801 14731.33294904448 14535.286566210603 15036.975296181266 0.8422823339187503 0.8025959002479043 0.8787379255095082 0.9252865168278247 0.7922386580488517 1.3492553135925909 1.0847653418007732 1.1345040726069677 0.9796739476446166 0.9666363267818848 1.0 13.876226776082683 ISTPQTNTVPIKPLIS(ph)TPPVSSQPK ddPTM_A549_MK2206_60min_R1 1 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 ISTPQTNTVPIKPLIS(0.496)T(0.496)PPVS(0.007)S(0.001)QPK 68.516 4.2175e-05 5662600.0 624.12 1022.7 1107.7 866.74 1340.2 1042.9 1061.3 972.79 1990.7 1611.3 1408.8 True False 729.4561977310067 1074.7510616951165 1264.7885163600697 1079.0913389094376 1143.0583553522051 1153.2589857790076 1254.1244723102857 1110.6859615444305 1539.8096284946716 1247.3062109035493 1058.9560790980058 0.688844619837624 1.0149156163403532 1.1943729691201048 1.0190142539514788 1.0794199853178383 1.0890527081740036 1.1843026326252546 1.0488498847756622 1.4540826186164828 1.1778639695481758 1.0 10.048427038504592 -4.796820038934147 0.9338941464423399 1.182460289041399 1.0460628820396015e-45 0.49866898585758923 0.12474337438950671 3.4252793129876364 1.2444973704300586 0.026333259995608302 5.046644916526025 1.596540577754594e-05 4.796820038934147 -1.182460289041399 ISTPQTNTVPIKPLIS(ph)TPPVSSQPK ddPTM_A549_PD325901_60min_R1 2 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 ISTPQT(0.001)NT(0.001)VPIKPLIS(0.523)T(0.46)PPVS(0.007)S(0.008)QPK;ISTPQTNTVPIKPLIS(0.559)T(0.441)PPVSSQPK 97.771 1.6981e-09 21159700.0 3196.1000000000004 2995.6 3460.8999999999996 3824.3 4647.799999999999 4433.8 3549.0 3858.4 4186.5 3625.9 3489.1 True False 3520.5657191555347 3248.049725059116 3695.777486082361 4060.5183253845335 4321.354562039544 4397.692602821706 3684.0591370873185 3781.4411851437562 4010.5559639459157 3396.960055200034 3059.9628192272194 1.1505256524798686 1.0614670559557313 1.2077850955769829 1.3269828966124497 1.4122245325617662 1.437171907837862 1.203955523230087 1.2357801086284907 1.310655129123028 1.1101311538347127 1.0 11.579298407892958 -10.77775505452728 0.893684050176058 0.9904437464123171 1.2651909955532674 0.33161824006753493 0.10877903082205068 0.5083302163651349 0.6792406983457309 0.09523970997369244 0.020929827955227867 1.668187818203129e-11 10.77775505452728 0.2747472491409503 ISVFRPGLR ddPTM_A549_PD325901_60min_R1 1 ISVFRPGLR 9 1 C9K0U8;A0A0G2JLD8;E7EUY5;Q04837 C9K0U8 SSBP1 Single-stranded DNA-binding protein, mitochondrial 0 50.04 0.02928 1326900.0 278.05 285.63 350.65 307.82 552.43 308.68 336.0 312.34 483.67 412.73 472.88 False True 306.27743131040876 309.70104251857197 374.44721762974405 326.8333422900576 513.6292225800395 306.16621242252785 348.7866638662548 306.11013367401 463.34303190773244 386.6701573630577 414.7187578333002 0.73851839475638 0.7467736548416722 0.9028943363595249 0.7880843007863925 1.2385000988706116 0.7382502156933881 0.8410197447747291 0.7381149945405981 1.1172463824121919 0.932367176693954 1.0 8.69598949195244 -8.769718386504369 24.99953897563453 1.0553663541426606 0.8483996494013782 0.21392838505491918 0.1438310928396586 159.0094270139364 480148.1917230973 0.02401112150338123 0.0257700868273604 1.699345217050524e-09 8.769718386504369 -0.20696670474128231 ISVGRLS(ph)PQQESSASSK ddPTM_A549_PD325901_60min_R1 1 ISVGRLSPQQESSASSK 17 1 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 IS(0.046)VGRLS(0.942)PQQES(0.007)S(0.004)AS(0.001)S(0.001)K 43.956 0.016023 23466000.0 10540.0 13012.0 10525.0 11670.0 11804.0 11552.0 10170.0 10902.0 11396.0 13636.0 13034.0 True False 11610.013040862103 14108.566905617969 11239.289791966501 12390.829395507022 10974.92776158931 11457.92434205339 10557.024915237533 10684.551057546452 10917.065750657512 12775.02063286569 11430.900629333526 1.0156691425581066 1.2342480582337598 0.9832374680193334 1.083976652172985 0.9601105037538235 1.0023640930488467 0.9235514556172864 0.9347077193662395 0.955048609437 1.1175865355773398 1.0 13.480651456092673 -6.394929634572132 1.277804295633704 0.9709705094397254 1.1115368323380155 0.2271191939684729 0.07772189792506554 0.3247413553605052 0.9826725079410061 0.00879736397777744 0.034193101937232274 4.027822887861487e-07 6.394929634572132 0.14056632289829007 ISVSLQEEASGGSLAAPART(ph)PTQEPR ddPTM_A549_PD325901_60min_R1 2 ISVSLQEEASGGSLAAPARTPTQEPR 26 1 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17 A0A384DVU0 PNPLA6 Neuropathy target esterase 1 ISVSLQEEAS(0.03)GGS(0.026)LAAPART(0.734)PT(0.21)QEPR;ISVSLQEEAS(0.014)GGS(0.014)LAAPART(0.91)PT(0.062)QEPR 79.209 1.7788e-06 14199500.0 3842.2 4405.4 5375.9 5093.0 4861.9 7022.799999999999 6227.3 6488.5 5581.7 5985.200000000001 6452.200000000001 True False 4232.257315521856 4776.658518752644 5740.740901912847 5407.583042957779 4520.41691664445 6965.60864520192 6464.2833092093115 6359.0817773702165 5347.120559884614 5607.293450559381 5658.620303865715 0.7479309598897399 0.8441383698230196 1.0145124771830036 0.9556363128417649 0.7988549635599873 1.2309729706450403 1.1423779935885086 1.1237866186260947 0.9449512907292439 0.9909294402963794 1.0 12.466234619801815 -5.585463068117624 2.585048419873246 1.0015465007105482 0.74918404515213 0.3825232755567194 0.11079231680825835 0.2678625721663292 3.2480983834780197 0.0160154489597453 0.10708022795540599 2.597388610825953e-06 5.585463068117624 -0.2523624555584182 ISVSS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 ISVSSPGR 8 0 O75864;O75864-2 O75864 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 ISVS(0.081)S(0.919)PGR 96.66799999999999 0.0024791 54444000.0 3568.5 4248.5 3699.6 3146.1 5116.1 4350.9 3502.0 3677.1 5628.0 5903.5 6214.8 True False 4170.775558551398 4464.730503189305 4224.2589104682775 3916.894641233797 4363.52846725669 4811.309350106324 4138.268069377761 4198.340185646464 4353.266986069228 4569.895249841185 4671.493640245799 0.8928141360654716 0.9557393945107426 0.9042630121714156 0.8384672960889876 0.9340756518780352 1.0299295515798172 0.885855443262472 0.8987147385746117 0.9318790351259416 0.9782514120260544 1.0 12.189668188525387 -10.869368733032205 0.37400526550527163 1.033087211258428 0.9138273917775681 0.25020087890081355 0.04612459373809853 2.8240972243996474 0.4593715796075364 0.1366005187011199 0.015853711650366555 1.3509250878042429e-11 10.869368733032205 -0.11925981948085984 ISVSS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 ISVSSPGR 8 0 O75864;O75864-2 O75864 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 ISVS(0.014)S(0.986)PGR;ISVS(0.002)S(0.998)PGR 114.89 0.001317 190211000.0 9092.5 9295.900000000001 9439.4 9263.9 11080.0 9992.6 9214.0 10328.900000000001 10579.3 10561.2 10881.2 True False 10015.563906455278 10079.298116963892 10080.014447723388 9836.110063156591 10301.779023924904 9911.22357863597 9564.64381209427 10122.881986634704 10134.688811506761 9894.364029614337 9542.881381609945 1.0495324740969996 1.0562111917672659 1.056286256177149 1.0307274784020397 1.079525000046362 1.038598635181179 1.0022804884200136 1.0607783521382208 1.0620155911229585 1.0368319204597611 1.0 13.220209224616148 -10.85671230545584 1.014366665172932 0.9989370943974799 1.048930609182689 0.15175941144198213 0.021724980856705715 0.4008353209825979 0.7064553104833529 0.014862522954139742 0.003320773946283198 1.3908736981014678e-11 10.85671230545584 0.04999351478520919 ISVYYNEATGGK ddPTM_A549_MK2206_60min_R1 2 ISVYYNEATGGK 12 0 Q5JP53;P07437 Q5JP53 TUBB Tubulin beta chain 0 ; 184.03 9.299099999999999e-19 16177000.0 7012.0 8360.2 8626.7 7370.8 10403.8 8006.6 8464.5 7751.700000000001 10972.099999999999 10901.2 11669.7 False True 8195.454173059381 8785.69847069866 9850.095778715726 9176.64633088779 8873.41480183052 8853.853097649057 10002.390083737313 8850.527213585623 8486.936868843308 8438.61134878779 8771.791422664674 0.9342965168875146 1.001585428490474 1.12292863613525 1.0461541877497278 1.0115852480148206 1.0093551785525077 1.1402904608393905 1.0089760217870105 0.9675260684966409 0.9620168722872265 1.0 13.098655792402631 -8.51808236225157 24.78497422396235 0.9848538178971725 1.0406950740498804 0.19362345786042912 0.054307519909541954 238.4154164722031 1231999.1307319656 0.009016733474016022 0.010360885762526882 3.033315873140006e-09 8.51808236225157 0.05584125615270785 ISVYYNEATGGK ddPTM_A549_PD325901_60min_R1 2 ISVYYNEATGGK 12 0 Q5JP53;P07437 Q5JP53 TUBB Tubulin beta chain 0 ; 242.45 2.6188999999999994e-50 30659000.0 22249.5 22739.1 24456.9 23778.6 26746.3 26342.6 25950.9 26348.6 26974.4 26532.9 29297.8 False True 24508.252860783792 24655.403759878383 26116.692305287008 25247.35011688116 24867.732157725874 26128.07459946118 26938.47570037738 25823.056502923162 25840.759774002818 24857.608165866965 25694.356334056138 0.9538379767972531 0.9595649503466762 1.0164369157857087 0.9826029416201992 0.9678285703839706 1.016879903888862 1.0484199467831092 1.0050088886132726 1.0056978831476946 0.9674345542145331 1.0 14.649163891381313 -7.2622310596598565 24.99825028440623 1.007644103263042 0.9777454925999216 0.3069260621700177 0.023267241610370616 67.1367128114289 2119907.0967095625 0.003109683738911892 0.005157548009668004 5.467250089197815e-08 7.2622310596598565 -0.029898610663120495 ISYIPDEEVS(ph)SPSPPQR ddPTM_A549_MK2206_60min_R1 2 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.751)S(0.246)PS(0.003)PPQR;ISYIPDEEVS(0.471)S(0.361)PS(0.168)PPQR 184.0 3.1838e-39 31610000.0 3464.5 3122.2 3303.9 3007.7 4841.4 3458.4 3433.3 3097.3 5633.7 6108.6 5051.5 True False 4049.222901107273 3281.1066440055665 3772.4427003719707 3744.586635020783 4129.236473363798 3824.3655924998748 4057.0861686449657 3536.3517600834343 4357.675945170255 4728.663017393047 3797.0731356924875 1.0664063494180762 0.8641146816907908 0.993513310268114 0.9861771162166113 1.0874787832104087 1.0071877616869789 1.0684772253945691 0.9313362249575147 1.1476407721010429 1.2453442028660482 1.0 11.890672071737265 -6.630851907098978 4.976363574551798 1.0566170707722882 0.9675072364616933 0.18792348512271995 0.08922217622166866 0.24565526588665482 9.80217705963009 0.01077143161741477 0.02283288965493564 2.3396349099803128e-07 6.630851907098978 -0.08910983431059483 ISYIPDEEVSS(ph)PSPPQR ddPTM_A549_MK2206_60min_R1 1 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.194)S(0.802)PS(0.004)PPQR 138.01 1.1776e-12 17486000.0 2689.0 3040.7 3100.5 2660.3 3416.5 3205.9 3170.6 3188.8 4047.0 4528.4 5108.8 True False 3142.8374602619315 3195.4586421202125 3540.1975218690923 3312.0736194254036 2913.937375810182 3545.146210095809 3746.6569790888448 3640.8221652904313 3130.3609617310167 3505.4312948896104 3840.143964292939 0.8184165722653062 0.8321194913088555 0.9218918756138159 0.8624868364890155 0.7588094099869785 0.9231805481929514 0.9756553436346735 0.9480952274560864 0.8151676059122408 0.9128385100882651 1.0 11.906944682243477 ISYIPDEEVSS(ph)PSPPQR ddPTM_A549_PD325901_60min_R1 2 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.155)S(0.832)PS(0.013)PPQR;ISYIPDEEVS(0.143)S(0.855)PS(0.002)PPQR 181.97 3.8072999999999996e-39 72812000.0 6155.2 6446.9 6260.9 6124.9 7542.3 7194.799999999999 7156.4 7387.6 6477.0 6905.4 8437.9 True False 6780.071372781246 6990.202888397521 6685.802323850174 6503.221162342839 7012.554867522457 7136.20793422834 7428.740718132343 7240.248522539912 6204.794214374224 6469.391865517064 7400.09179225513 0.9162144961333059 0.9446102946605885 0.903475593484864 0.8788027696020004 0.9476307949128057 0.9643404615192789 1.0038714284473063 0.9783998260828997 0.8384753038966498 0.8742312997100754 1.0 12.853327450999611 -6.826218757593512 24.999524999542565 0.9369595181461897 0.9126682112431188 0.08300719809665258 0.04947950535682645 207.63662918549363 80128.67298689652 0.009483876441848638 0.01792284650083517 1.492042666477038e-07 6.826218757593512 -0.02429130690307091 ISYIPDEEVSSPS(ph)PPQR ddPTM_A549_MK2206_60min_R1 1 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.02)S(0.173)PS(0.807)PPQR 139.49 4.9352e-13 11598000.0 1540.5 2077.6 1796.5 1714.3 2344.5 1445.9 1211.6 1460.9 2859.8 2632.3 2742.8 True False 1800.4987383910395 2183.3409658529126 2051.2707137680463 2134.30357695785 1999.6271557403688 1598.9041782892587 1431.7320367955733 1667.9870488186116 2212.059866162184 2037.6616017882536 2061.6870625709903 0.8733133030120291 1.0590069683660992 0.9949476576770315 1.0352218897354406 0.9698984836460919 0.775531945326064 0.6944468259941241 0.8090398776323395 1.0729367741211286 0.9883466985756916 1.0 11.009609651539249 -8.778232710774557 24.99820203472582 1.0344423722801606 0.9054424769227167 0.1894686058009939 0.10833664070065892 294.1462920086371 437858.39225220133 0.02111806128491857 0.022511254883618007 1.6663540801804498e-09 8.778232710774557 -0.12899989535744383 ISYIPDEEVSSPS(ph)PPQR ddPTM_A549_PD325901_60min_R1 1 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.022)S(0.153)PS(0.825)PPQR 137.61 1.3623e-12 22357000.0 6958.0 7707.0 6815.2 7960.2 7714.9 8194.9 7474.8 8619.3 7866.7 8713.7 9196.7 True False 7664.371037791128 8356.495937718852 7277.720455126847 8451.883475074117 7173.032038960129 8128.1634514104335 7759.257604367507 8447.381299789957 7536.089956186156 8163.515494910653 8065.564202684642 0.950258512013335 1.0360708473360578 0.9023200698972108 1.0478973649804795 0.889340393146033 1.0077612981748947 0.9620229173533601 1.0473391677891828 0.9343537248984704 1.0121443819383904 1.0 12.977559741036806 ISYT(ph)PPESPVPSYASSTPLHVPVPR ddPTM_A549_PD325901_60min_R1 1 ISYTPPESPVPSYASSTPLHVPVPR 25 0 P41212 P41212 ETV6 Transcription factor ETV6 1 IS(0.183)Y(0.088)T(0.615)PPES(0.096)PVPS(0.008)Y(0.008)AS(0.001)STPLHVPVPR 43.622 0.044285000000000005 1419000.0 900.97 791.33 918.04 813.83 884.29 886.09 894.14 818.65 737.76 780.6 641.29 True False 992.4358111409415 858.0181562728764 980.3437150229859 864.098430757967 822.1805210348878 878.8739768222034 928.166986992182 802.3213835314994 706.7545128295088 731.3127827819702 562.4153954722487 1.7645957403203967 1.5255950729307757 1.7430954467379245 1.5364060758550202 1.4618741372549369 1.562677664760992 1.6503228653846134 1.4265636929405292 1.2566414762456164 1.3003071905026742 1.0 9.135492276837134 -9.01159736901583 0.5249183466016537 1.0125628774788364 1.6415472305848515 0.6708053736593487 0.12315849341629895 0.1847684544464079 0.11921932927684996 0.039448267939109855 0.03141513167807359 9.736494682127183e-10 9.01159736901583 0.6289843531060151 IT(ph)ESSLVEITEHKDFTLK ddPTM_A549_MK2206_60min_R1 1 ITESSLVEITEHKDFTLK 18 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 IT(0.363)ES(0.318)S(0.318)LVEIT(0.001)EHKDFTLK 42.611999999999995 0.041105 998200.0 414.03 394.93 544.51 413.67 664.68 667.75 520.91 426.19 570.72 768.63 697.87 True False 483.9081419383591 415.0302501175834 621.7297057355073 515.019168570352 566.9064524962714 738.410861783424 615.5526042317449 486.60373765213546 441.45283125256367 594.9959491632809 524.5696187678342 0.922486024019109 0.7911824003312493 1.185218669727563 0.9817937412770581 1.0807077501512241 1.407650834827002 1.1734431088053123 0.9276247046009315 0.8415524183224636 1.1342554503268254 1.0 9.034990443961263 -8.29553138750938 18.728838585797316 0.92326998844785 1.0797690212066215 0.04789448760509707 0.16572711891710323 42.65154163563303 23430.611102441468 0.027286605309040732 0.03299380343389748 5.0637075156617675e-09 8.29553138750938 0.15649903275877153 IT(ph)KPGSIDSNNQLFAPGGR ddPTM_A549_PD325901_60min_R1 1 ITKPGSIDSNNQLFAPGGR 19 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 IT(0.569)KPGS(0.431)IDSNNQLFAPGGR 79.445 0.00011706 11158000.0 3758.6 4429.5 4343.2 4266.7 4951.8 5799.2 4272.3 5304.1 5934.5 4740.8 5194.6 True False 4140.170305064921 4802.789510331603 4637.95566978327 4530.244368621237 4604.002650782611 5751.97323791863 4434.884714392263 5198.305564514047 5685.093602779661 4441.465078930011 4555.6971312824835 0.9087896288442278 1.054238104932924 1.0180561912107686 0.9944129818274199 1.0106033210962224 1.2625890335030634 0.9734810253164897 1.1410560041006634 1.2479085942175525 0.9749254506916015 1.0 12.153456122638557 -7.040975390955515 24.937799579903775 1.1196292554027807 1.0002375013683085 0.2009499359622332 0.09797590464379266 564.2223652341811 343387.2987202769 0.015719863300663637 0.027229831505812718 9.099648337999999e-08 7.040975390955515 -0.11939175403447222 IT(ph)PDGITK ddPTM_A549_MK2206_60min_R1 2 ITPDGITK 8 0 Q14694;Q14694-3;Q14694-2;H3BQC6 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 IT(1)PDGITK;IT(1)PDGITK 88.681 0.0028394 22016000.0 5050.7 5636.0 4464.799999999999 3885.7 7752.5 5733.3 5557.8 6354.9 8639.2 6794.1 7031.3 True False 5903.13468224059 5922.848326697639 5097.975776694444 4837.696674435704 6612.117519674653 6339.994000543474 6567.580318671541 7255.726536065031 6682.4349939675285 5259.3080912926225 5285.234155992197 1.1169107191869336 1.1206406664087984 0.9645695207116894 0.9153230550723865 1.2510547923743522 1.1995672875449483 1.2426280699835162 1.3728297218087802 1.264359306841919 0.995094623258994 1.0 12.367751674568128 -6.7700987998823505 24.999941237306977 1.1686871544816393 1.031252997539491 0.28513570747257033 0.11902491743638782 253.44742807283302 731709.5193840002 0.020434477101313374 0.039041027063237546 1.6978573542327242e-07 6.7700987998823505 -0.13743415694214822 IT(ph)PDGITK ddPTM_A549_PD325901_60min_R1 4 ITPDGITK 8 0 Q14694;Q14694-3;Q14694-2;H3BQC6 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 IT(0.999)PDGIT(0.001)K;IT(0.998)PDGIT(0.002)K;IT(1)PDGITK;IT(1)PDGITK 75.387 0.0051383 31473000.0 12708.000000000002 11757.0 11426.5 11635.2 14627.0 11957.2 11700.9 12094.4 12075.9 13531.5 14677.600000000002 True False 13998.106804864854 12747.803651195083 12201.971003126382 12353.879878543552 13599.64998041061 11859.824527597028 12146.184152478163 11853.167704126743 11568.391918073447 12677.118780699768 12872.348248972356 1.0874555701973314 0.9903246404332469 0.9479211381730996 0.9597223163636678 1.0565010919042155 0.9213411801956056 0.9435872862939235 0.9208240388518872 0.89870097470343 0.984833422426388 1.0 13.651987641974934 -7.283298363444203 24.7658589500442 0.9457976330818447 1.0013190289983938 0.3176985987631966 0.04579949798063933 864.9563600321862 979978.8797295631 0.007830064922371595 0.012521962816479283 5.208367695443868e-08 7.283298363444203 0.05552139591654903 IT(ph)PPAAKPGSPQAK ddPTM_A549_PD325901_60min_R1 1 ITPPAAKPGSPQAK 14 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 IT(0.999)PPAAKPGS(0.001)PQAK 43.023999999999994 0.029602999999999997 7617700.0 2422.7 2538.1 2396.4 2890.7 4222.1 2596.9 2962.0 2967.1 3415.2 3201.0 3440.3 True False 2668.6507205025246 2751.9945944627257 2559.03411472385 3069.251973743971 3925.5542614542755 2575.7517073994495 3074.7205308685916 2907.918862855078 3271.671020677917 2998.888313713923 3017.1649098585335 0.8844895125827412 0.9121127537545699 0.8481585167460521 1.0172635787043804 1.3010738155636092 0.8536993450318959 1.0190760607158051 0.9637918210415028 1.0843527345780104 0.9939424603259529 1.0 11.558977837007857 -6.320656038759798 6.598819093682648 1.038161683085773 0.88486603185577 0.28653148389034633 0.10311874043679581 0.20578288072507783 18.813403291748127 0.013796708093511809 0.0324709040674806 4.779076266620285e-07 6.320656038759798 -0.153295651230003 IT(ph)PVTVK ddPTM_A549_MK2206_60min_R1 2 ITPVTVK 7 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2;S4R349;S4R3C2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 IT(0.998)PVT(0.002)VK;IT(0.999)PVT(0.001)VK 96.03399999999999 0.012526 42155000.0 7114.299999999999 6735.0 6408.0 4611.700000000001 7787.2 7065.2 5954.5 5308.200000000001 8077.0 9027.0 8259.7 True False 8315.019912064505 7077.7827324891105 7316.750756373861 5741.566707027084 6641.7131956414605 7812.834774499806 7036.355573703561 6060.653605680717 6247.5723963186065 6987.794430476225 6208.588533876911 1.3392770138806809 1.1399986798721604 1.178488591481028 0.9247780998367758 1.0697621785372347 1.2583914575542237 1.1333261232098042 0.9761725346447114 1.0062790217501099 1.1255045156153622 1.0 12.600049606791018 -2.0000000000000004 0.3115701582053789 1.0057485449154133 3.591616399234831 0.3153588876194704 0.0989623577999584 33.46209428150912 0.4183283464938889 0.029597679525265937 49.68047554948378 0.00999999999999999 2.0000000000000004 2.585867854319418 IT(ph)PVTVK ddPTM_A549_PD325901_60min_R1 2 ITPVTVK 7 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2;S4R349;S4R3C2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 IT(0.995)PVT(0.005)VK;IT(0.999)PVT(0.001)VK 116.37 0.0075658999999999995 70546000.0 16672.6 16315.6 16565.3 14487.5 19130.0 15018.0 14887.0 14664.400000000001 16799.1 16881.7 16999.2 True False 18365.190078280586 17690.572871603188 17689.52087324112 15382.359971500264 17786.374794917287 14895.69838720203 15453.532931478974 14371.907038000749 16093.092247443896 15815.786580951059 14908.406166807314 1.231868106677265 1.1866173133242242 1.1865467492176187 1.031791044554996 1.193043347216928 0.9991476097804756 1.0365650599113239 0.9640136495609404 1.0794643013734235 1.0608636767734416 1.0 13.863838409259868 -6.08957661880323 0.6381964839383838 1.0296397751649407 1.267722693605493 0.6300530329901934 0.054646932028147105 0.7348798713895729 0.3586924832221952 0.009614293429092716 0.10418711979172428 8.136233076230787e-07 6.08957661880323 0.2380829184405524 IT(ph)RTPQASTYSYETSDLCYTAEK ddPTM_A549_MK2206_60min_R1 3 ITRTPQASTYSYETSDLCYTAEK 23 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.57)RT(0.385)PQAS(0.013)T(0.013)YS(0.017)YET(0.001)SDLCYTAEK;IT(0.418)RT(0.418)PQAS(0.051)T(0.051)Y(0.005)S(0.051)Y(0.005)ET(0.001)SDLCYTAEK;IT(0.584)RT(0.378)PQAS(0.012)T(0.012)YS(0.015)YETSDLCYTAEK 127.63 2.8210000000000003e-22 17305300.0 4282.23 4302.3 4154.83 3405.9 5975.6 4994.8 4207.3 4749.5 6159.4 6135.0 5804.4 True False 5004.965733528247 4521.268693390927 4744.047369710485 4240.345652896661 5096.597155829456 5523.346420720098 4971.711949826684 5422.756169733726 4764.305734540653 4749.099239057451 4363.007286709586 1.1471366891304924 1.0362734683399293 1.0873342760993336 0.9718859892380717 1.1681385844471315 1.2659493917292068 1.1395149315865938 1.2428941354859304 1.091977487421001 1.0884921630830098 1.0 12.091107167840402 -9.847948822070272 1.1249316175261908 1.015391877615509 1.1268898330986774 0.11188671149828255 0.08305745791478444 0.4681432700760873 1.2038381169777308 0.026242037907097438 0.016257284543703458 1.4192247554634238e-10 9.847948822070272 0.11149795548316832 IT(ph)RTPQASTYSYETSDLCYTAEK ddPTM_A549_PD325901_60min_R1 1 ITRTPQASTYSYETSDLCYTAEK 23 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.564)RT(0.418)PQAS(0.007)T(0.007)YS(0.005)YETSDLCYTAEK 112.99 1.0414e-11 17840000.0 1732.0 1917.5 2431.5 1943.7 2159.0 2354.4 1439.8 2362.7 1889.3 2289.1 2954.0 True False 1907.8313649689894 2079.094454466834 2596.5162117972986 2063.757934537019 2007.3592881456552 2335.2265469988333 1494.5923768887908 2315.574094997707 1809.8992912177287 2144.56583533975 2590.6767269488437 0.7364220109453518 0.8025294830650203 1.0022540384092353 0.7966095935742625 0.7748397425524459 0.9013963505007182 0.5769119556066878 0.8938105132572302 0.6986202764670405 0.8278014053360881 1.0 11.339113287241064 -10.981958252217403 1.2436861474369005 1.0003924007519411 0.7924540175498336 0.06209686256858438 0.11732640379040137 0.4229895288070492 1.1602240649874977 0.07467069305598195 0.01702207405815789 1.042417629913444e-11 10.981958252217403 -0.20793838320210756 IT(ph)SPLMEPSSIEK ddPTM_A549_MK2206_60min_R1 1 ITSPLMEPSSIEK 13 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 IT(0.574)S(0.426)PLMEPSSIEK 84.506 0.00039388 3962700.0 1193.4 1564.8 1144.7 1125.1 1973.5 1291.2 1248.3 1158.2 2341.5 1325.2 1749.2 True False 1394.8167441712872 1644.441636198806 1307.0356727248998 1400.749550507659 1683.2007642796423 1427.833926970807 1475.0999517430787 1322.3783968387409 1811.1539886071585 1025.8363996086289 1314.8253645359396 1.0608380259408672 1.2506920542860098 0.9940754932014951 1.06535026497762 1.2801705912280745 1.085949484610645 1.1218980037426545 1.0057445136871597 1.3774863472050491 0.7802073395280842 1.0 10.360655477754591 IT(ph)SPNIRR ddPTM_A549_MK2206_60min_R1 1 ITSPNIRR 8 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 IT(0.5)S(0.5)PNIRR 45.137 0.032482 3000400.0 416.36 522.75 414.76 379.02 666.12 373.66 437.59 320.08 751.74 649.06 672.72 True False 486.6313889753282 549.3557421542213 473.57920469937886 471.8799170148543 568.1346304038282 413.2004531845661 517.0944387432936 365.4523202038888 581.4720902821035 502.4368952082523 505.66505787252294 0.9623591375340926 1.086402419153733 0.9365472209843045 0.9331867204749872 1.1235394290325942 0.8171425862863022 1.0226026708644993 0.7227161824102518 1.149915504797825 0.9936160060616953 1.0 8.98203827953967 IT(ph)SPNIRR ddPTM_A549_PD325901_60min_R1 1 ITSPNIRR 8 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 IT(0.647)S(0.353)PNIRR 54.066 0.014652000000000002 4117100.0 844.88 650.95 614.05 764.91 903.33 1353.3 792.89 833.01 822.72 986.88 1114.8 True False 930.6515956322175 705.8078410092235 655.7231255826156 812.1567534633487 839.883217119322 1342.2791734851855 823.0638628360564 816.3949620662971 788.1439394858673 924.5682283780056 977.6866672994478 0.9518914666217656 0.72191619730153 0.6706884194236223 0.830692266374744 0.8590515194804031 1.3729134480199163 0.8418483041294934 0.8350272018348492 0.8061314180164361 0.9456692612284822 1.0 9.93322836869272 -6.774236469989633 3.7523382468330415 0.929600741251927 0.7761346120557654 0.18032990437164764 0.16039321654112737 0.3382701144142841 10.277741447019796 0.02430451391466009 0.0499969085258234 1.6817581074335882e-07 6.774236469989633 -0.15346612919616165 IT(ph)SPSLK ddPTM_A549_MK2206_60min_R1 1 ITSPSLK 7 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 IT(0.493)S(0.493)PS(0.014)LK 61.678999999999995 0.029514 4638900.0 3078.2 2820.0 3714.0 3107.6 3935.1 3291.6 3548.5 3171.0 5043.2 4627.7 4090.8 True False 3597.7249052355064 2963.525954806129 4240.7010469994575 3868.962139505463 3356.2520027954483 3639.914927212754 4193.216517472012 3620.4989607802154 3900.9232523355213 3582.2993559227666 3074.941459663629 1.1700141132537416 0.9637666257003514 1.3791160263139943 1.2582230231884455 1.0914848451009511 1.1837347068099722 1.3636736089052937 1.1774204511770658 1.2686170788962752 1.1649975789505398 1.0 11.586343229534485 -10.853880287896315 1.061492802161549 0.9981206289980408 1.2095731352690828 0.08148980833717545 0.12072353196179704 0.5037579271263387 0.9928780845073348 0.0802894485151701 0.018869260438314512 1.3999731682229655e-11 10.853880287896315 0.21145250627104206 IT(ph)SPSLK ddPTM_A549_PD325901_60min_R1 1 ITSPSLK 7 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 IT(0.499)S(0.499)PS(0.002)LK 78.334 0.017825 3788100.0 2660.2 2826.3 2458.6 2964.6 3291.3 3440.5 2908.1 2813.4 3751.8 3263.2 3647.5 True False 2930.261545664263 3064.4822199007117 2625.4553807628367 3147.7166089048956 3060.130442368594 3412.4817086941384 3018.7693368733812 2757.284529930396 3594.124893235949 3057.1609950988027 3198.8806234075505 0.916027164071804 0.9579858021198449 0.8207419062628593 0.9840056505615539 0.9566253957638609 1.0667736969374784 0.9436955273615966 0.8619529312079323 1.1235570552199512 0.9556971187759474 1.0 11.643351439281528 -7.485514810235797 0.5854720670628059 1.0495836810030348 0.906589515256745 0.017959322681684764 0.07989571145223645 0.8148040983951769 0.5485776151232791 0.01927468084098413 0.04886260113527268 3.269528969526792e-08 7.485514810235797 -0.14299416574628976 ITAEATGKDTSSITSCGDGNVVKQEQLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 ITAEATGKDTSSITSCGDGNVVKQEQLSPK 30 2 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 ITAEATGKDTSS(0.001)IT(0.001)S(0.001)CGDGNVVKQEQLS(0.997)PK;ITAEATGKDTSSITS(0.001)CGDGNVVKQEQLS(0.999)PK 52.577 0.0014433 14898100.0 2723.2 2865.5 3895.7 3379.1 2802.8 5219.8 4331.9 4437.7 3033.6 3643.3 3790.2 True False 2999.657259286115 3106.985741473125 4160.085628747163 3587.819332507094 2605.9409971350824 5177.291679419172 4496.752825006638 4349.186592191696 2906.1083416281695 3413.261416230533 3324.0294280573803 0.902415975612817 0.93470464348112 1.2515188925924727 1.0793584744536624 0.7839704953087732 1.5575348508406168 1.3528017493017856 1.3084079687987105 0.87427274773754 1.0268445241248365 1.0 11.698717439190474 -8.778111839436399 24.996853708184798 0.9406287882680092 1.1490676267090196 0.11875283786814028 0.2141672675774326 329.8881631442113 494596.09105580923 0.03830103218359435 0.04082898099375903 1.6668179186287768e-09 8.778111839436399 0.2084388384410104 ITAHSS(ph)PPLTK ddPTM_A549_MK2206_60min_R1 2 ITAHSSPPLTK 11 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 ITAHS(0.198)S(0.802)PPLTK;IT(0.03)AHS(0.134)S(0.836)PPLTK 99.844 8.3673e-05 54300000.0 5490.5 5631.2 4909.4 5261.200000000001 6010.7 5669.799999999999 5647.9 5474.4 8371.3 8059.5 7604.5 True False 6417.162170162938 5917.804027200097 5605.626742094538 6550.19423618424 5126.533992326143 6269.774472691361 6674.050322398247 6250.412964646866 6475.213916219138 6238.853352434156 5716.092776476992 1.1226483580831657 1.0352883094468293 0.9806745553821228 1.1459216097995755 0.8968598293965737 1.0968636650708143 1.167589572699636 1.0934764723149215 1.1328042020007267 1.091454179699189 1.0 12.480813617309433 ITAHSS(ph)PPLTK ddPTM_A549_PD325901_60min_R1 2 ITAHSSPPLTK 11 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 ITAHS(0.097)S(0.903)PPLTK;ITAHS(0.122)S(0.878)PPLTK 112.44 1.4397000000000001e-05 94033000.0 5461.8 5655.6 5494.1 5996.9 6647.799999999999 6678.799999999999 5977.0 6710.5 6230.0 5790.0 6442.1 True False 6016.277915235354 6132.217260329925 5866.962664707188 6367.314893051935 6180.881461664979 6624.410067149082 6204.458005739894 6576.653813214588 5968.174765408589 5424.41841187242 5649.762539836539 1.0648727044392594 1.0853938049770397 1.0384441157197615 1.12700575434028 1.094007299967656 1.1725112374972033 1.0981803150118596 1.1640584479157359 1.0563585147741914 0.9601144072206194 1.0 12.463974516827165 -9.329445955240322 1.509457573437407 1.0160005856829957 1.1042680447874607 0.523060576122526 0.04249227568305947 0.21694248700686103 1.020553656210928 0.009053118722262176 0.007766715346977037 4.683322282547657e-10 9.329445955240322 0.08826745910446498 ITAT(ph)IAK ddPTM_A549_MK2206_60min_R1 1 ITATIAK 7 0 Q9Y4K4;G3V5C6 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 IT(0.185)AT(0.815)IAK 56.258 0.040313999999999996 1618600.0 1542.8 1989.3 1505.7 1225.4 1953.1 1579.4 1331.2 1477.2 2681.5 2152.2 2072.9 True False 1803.1869221614395 2090.546873012706 1719.230901041216 1525.623055010296 1665.8015772559247 1746.531059679131 1573.0618086680963 1686.5976237352695 2074.144531475592 1666.0165252321847 1558.1417208704254 1.1572675951158822 1.34169237946139 1.1033854481996677 0.9791298407426229 1.0690950347734463 1.1209064209534583 1.009575565301811 1.0824417324459323 1.331165518318136 1.069232986266164 1.0 10.605610744440575 -11.279006329256806 1.818019237843073 0.9996051490782338 1.1615771288115264 0.04562781942703864 0.11336828277600143 0.5279633428429287 3.149902783846983 0.09924693443534126 0.019824902140103635 5.260096004537854e-12 11.279006329256806 0.16197197973329258 ITDSEASKPKDGQDAIAQS(ph)PEKESK ddPTM_A549_MK2206_60min_R1 1 ITDSEASKPKDGQDAIAQSPEKESK 25 3 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 ITDSEASKPKDGQDAIAQS(0.935)PEKES(0.064)K 53.968 0.00094344 5326400.0 1477.0 1670.8 1678.2 1354.7 2165.6 1489.7 1336.5 1175.2 2877.4 1594.8 2457.2 True False 1726.2814908169855 1755.8365834361985 1916.193994904278 1686.6015608147932 1847.0431087529737 1647.339065217172 1579.3247500637865 1341.788198899057 2225.673494263608 1234.5335723632966 1847.0094247299958 0.9346359946535417 0.9506375874031474 1.0374576162135156 0.9131526554399408 1.0000182370606923 0.8918953217891606 0.8550713000799437 0.7264652691716534 1.2050146926505083 0.6683959246952766 1.0 10.850975512637303 -8.779429022557357 24.999993544602702 1.0968124819634544 0.919207779060181 0.0 0.15620682103496614 185.30088784588193 257509.3910360725 0.01828674004446104 0.019486830692229288 1.6617702413466651e-09 8.779429022557357 -0.17760470290327335 ITES(ph)EEVVSR ddPTM_A549_MK2206_60min_R1 2 ITESEEVVSR 10 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 IT(0.007)ES(0.993)EEVVSR;IT(0.006)ES(0.994)EEVVSR 155.48 1.6037e-08 8660400.0 2302.8999999999996 2486.2 1925.1399999999999 1704.49 2892.2 2403.5 1842.0 2752.9 2669.7 3218.8 2742.5 True False 2691.5732195006312 2612.7369605812055 2198.153800113227 2122.090126517465 2466.761211274173 2657.8367746858235 2176.6675567658026 3143.1320054026673 2065.0172126348625 2491.670844446313 2061.461560850568 1.3056625797039245 1.2674196842667196 1.066308410430054 1.029410475954682 1.1966079106788567 1.2892972758556742 1.0558855901575483 1.5247104603327155 1.001724820802784 1.2086913924401477 1.0 11.0094518448513 -8.917795639771276 24.999999336725512 1.0007150039235932 1.2074154725226625 0.11769067937466227 0.1472672741259735 22.153390620578044 6735.411534249712 0.022142718015187652 0.023572670670141294 1.2083823138799553e-09 8.917795639771276 0.2067004685990692 ITES(ph)EEVVSR ddPTM_A549_PD325901_60min_R1 2 ITESEEVVSR 10 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ITES(1)EEVVSR;IT(0.012)ES(0.988)EEVVSR 156.01 1.5334e-08 11943600.0 2226.71 2467.6000000000004 2472.7 2683.4 2580.1 2930.8 2604.3 2668.5 2982.6000000000004 2819.4 2764.1 True False 2452.763959982736 2675.553312042952 2640.512291553023 2849.147523556429 2398.8826768617914 2906.9325365036416 2703.408061627642 2615.274674102247 2857.2516942708935 2641.382602838185 2424.1332230735593 1.0118107109942067 1.1037154586127147 1.0892603865249273 1.1753262966067493 0.9895836804795106 1.1991636882142727 1.1152060604160978 1.0788494003585907 1.1786694176189636 1.0896194061022666 1.0 11.243253271833547 -3.8138960205188708 15.620963579184368 1.09199662778152 0.6255730643619473 0.0 0.0688769351439804 0.0 0.0 0.010107405383764721 0.0 0.0001534984447245361 3.8138960205188708 -0.4664235634195728 ITES(ph)PR ddPTM_A549_MK2206_60min_R1 1 ITESPR 6 0 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ITES(1)PR 92.47 0.036699 34711000.0 1699.8 1710.9 1283.1 1487.8 1891.6 1400.6 1200.4 1884.7 1557.6 2483.1 2316.9 True False 1986.6846838799672 1797.9775021552516 1465.0628738301034 1852.3110667898795 1613.3481457873684 1548.810562356964 1418.4971417707218 2151.86199665168 1204.8060869760875 1922.165985412152 1741.5497868130105 1.140756755232101 1.0324008625934848 0.8412408792005477 1.063599261310559 0.926386462220958 0.8893289035343893 0.8145027793701687 1.23560176857736 0.6918011165106284 1.1037100403139575 1.0 10.766156001434863 -2.0000000000005187 0.45884542545293083 0.8815694183593762 6.96950257641335 0.0 0.15430443914446415 99.96915538910305 1.045854319929875 0.030694088829983025 578.5095786414059 0.009999999999988057 2.0000000000005187 6.087933158053974 ITES(ph)PR ddPTM_A549_PD325901_60min_R1 1 ITESPR 6 0 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ITES(1)PR 89.046 0.038161 42276000.0 6925.8 6181.5 7666.8 7117.3 9018.8 7849.4 7160.1 8640.1 7991.3 8003.3 8022.3 True False 7628.902117495519 6702.43669897614 8187.115152213657 7556.919456438919 8385.35060117093 7785.4770888602725 7432.581523657057 8467.76642747268 7655.453451494327 7497.9702721482745 7035.607957549668 1.0843273479030633 0.9526449937825184 1.1636684706725802 1.0740961551630872 1.1918444932925663 1.1065819948801932 1.0564234915450925 1.2035585948739813 1.0881011986006872 1.0657174642743505 1.0 12.780459378976095 -10.221521054788905 0.9253997408178224 1.0064094776161558 1.1018888182396522 0.11044104926707843 0.06845176059100448 0.5548193254984041 0.9348697175138906 0.029435731809672162 0.012399802709953594 6.004528979793605e-11 10.221521054788905 0.09547934062349639 ITES(ph)SLVEITEHK ddPTM_A549_PD325901_60min_R1 1 ITESSLVEITEHK 13 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 IT(0.086)ES(0.457)S(0.457)LVEITEHK 107.35 2.5834e-05 2494900.0 311.82 622.51 604.15 489.94 558.3 420.21 476.46 528.64 423.44 433.78 474.4 True False 343.47573685024844 674.9711023990345 645.1512520490793 520.2024810655279 519.0869340304399 416.78794908018165 494.59194602891614 518.0958604899428 405.64428935226545 406.391056770642 416.05180746937435 0.8255600160456742 1.622324648712695 1.5506512421450518 1.250331020623724 1.2476497510917555 1.0017693508298517 1.1887749005040031 1.245267659432245 0.9749850428954692 0.9767799333513448 1.0 8.700619376134917 -7.684922815821881 0.6428333282049945 0.9882863791979487 1.3514789916248833 0.22691717311189752 0.20860527669359252 0.6331409381814538 0.5281826350323255 0.04464506369232349 0.09279154749956799 2.0657472542728605e-08 7.684922815821881 0.36319261242693457 ITESEEVVS(ph)REVSGIK ddPTM_A549_MK2206_60min_R1 1 ITESEEVVSREVSGIK 16 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ITESEEVVS(0.858)REVS(0.141)GIK 47.047 0.0075247 2753700.0 908.55 760.15 877.78 677.78 894.09 1038.7 658.9 687.35 1091.6 1322.7 1415.5 True False 1061.8910280851537 798.8383881368372 1002.2624030789398 843.8361304267 762.570545393861 1148.6145445667416 778.6136010602532 784.7839674210917 844.3543429270014 1023.9011513449533 1063.9922841874127 0.9980251209210002 0.7507934033064182 0.9419827737231976 0.7930848211659267 0.7167068377532906 1.0795327763527498 0.7317850069325385 0.7375842654915898 0.7935718665214267 0.962320090626336 1.0 10.055271973466493 -10.792196730811245 1.0748697172114388 0.9986560156329761 0.8329840002485889 0.18558220994865215 0.11435385764603814 0.5816956241125437 1.2083865896034796 0.07092953502332167 0.01839502589067215 1.613627435066396e-11 10.792196730811245 -0.16567201538438725 ITESEEVVS(ph)REVSGIK ddPTM_A549_PD325901_60min_R1 2 ITESEEVVSREVSGIK 16 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 ITESEEVVS(0.997)REVS(0.003)GIK;ITESEEVVS(1)REVSGIK 119.38 3.2405e-08 11110700.0 3081.8 2708.7 3009.8 2992.7 3464.3 3013.6000000000004 3371.6 3107.2 3475.0 3224.9 3193.7 True False 3394.66206729875 2936.9716551834763 3214.063127397699 3177.5522820851634 3220.9795191861963 2989.0582407558954 3499.908083010314 3045.224458448755 3328.9578346380176 3021.279263635121 2800.895146532336 1.2119918417872695 1.0485832212675332 1.147512834022683 1.1344774137722184 1.1499821845076734 1.0671796280758727 1.2495676917229104 1.0872325807051049 1.188533543913435 1.0786834585277612 1.0 11.451672260788087 -10.891468353047811 1.0762869785475442 0.9978916338436304 1.1431277373932545 0.26935033074397396 0.061374386999771297 0.3544388339480807 0.7113829868122955 0.03967389600239866 0.008949822226281134 1.2839013246969934e-11 10.891468353047811 0.14523610354962402 ITESEEVVSR ddPTM_A549_MK2206_60min_R1 2 ITESEEVVSR 10 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 121.6 0.00011781 11883200.0 4017.9 3880.8 4134.7 4209.3 4903.2 4282.0 3780.7 4065.5 6086.2 5333.4 5891.200000000001 False True 4696.023291776282 4078.316143762991 4721.062633017947 5240.578688962661 4181.945775229763 4735.118397838443 4467.60425182653 4641.797075071576 4707.685417664269 4128.581235792831 4428.252451151456 1.0604687387583784 0.9209764322949853 1.0661231908290036 1.1834417180980683 0.9443783572326264 1.0692973018300242 1.0088865305465686 1.0482232271704819 1.0631023117121865 0.9323274319465 1.0 12.11252175602329 -5.809686719790208 24.999985786171784 1.0391853245753728 0.9907200896683906 0.05224083814621916 0.07115001280950205 189.2603744539712 98067.34278547403 0.008332245680070675 0.025906115537261104 1.5499342675658319e-06 5.809686719790208 -0.04846523490698218 ITESEEVVSR ddPTM_A549_PD325901_60min_R1 2 ITESEEVVSR 10 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 85.355 0.0023268 14351900.0 4923.6 5794.1 5680.2 5509.9 6401.1 5882.0 5883.9 6349.9 6221.6 5815.5 7527.2 False True 5423.440247437254 6282.389141395723 6065.692529817402 5850.234009109177 5951.508818596185 5834.098942170886 6107.815034293626 6223.246263099819 5960.127788196804 5448.308337520563 6601.402118852174 0.8215588370157128 0.9516749666642152 0.9188491203247714 0.8862108236676232 0.9015522326082765 0.8837666358045307 0.9252299624122321 0.9427158277977911 0.9028578597228566 0.8253259291630448 1.0 12.688556765963167 -14.999999999999998 0.2187126256755863 1.504256249001503 0.891859977583868 0.0 0.062077104518959 23.395365900921448 0.2869945993076074 5.056359817882657 0.020836961225182783 1.000000000000004e-15 14.999999999999998 -0.612396271417635 ITESS(ph)LVEITEHK ddPTM_A549_MK2206_60min_R1 2 ITESSLVEITEHK 13 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 IT(0.008)ES(0.454)S(0.537)LVEITEHK;IT(0.078)ES(0.4)S(0.521)LVEITEHK 126.71 2.1538000000000001e-07 9276700.0 646.55 888.46 573.88 725.42 1269.49 683.01 1081.47 1011.67 1555.23 1014.13 1100.69 True False 755.6718333701567 933.6788190805156 655.2648133688873 903.1479325653407 1082.7497026832339 755.2856648546556 1277.9591002255756 1155.0773206094368 1202.9728881919755 785.037328656126 827.358295501408 0.9133549968362779 1.12850602230884 0.7919964263750737 1.0916043719825177 1.3086829594511407 0.9128882480073838 1.544625958516664 1.3961029059476822 1.4539926592056855 0.9488480781840303 1.0 9.69236842751494 -6.53914003788246 5.730521523721245 1.2398091404931146 0.9588681686225868 0.254987720308105 0.2080024551321553 0.1821012582605641 19.936143800469676 0.03175247089276957 0.06878128733079553 2.889747935382467e-07 6.53914003788246 -0.2809409718705278 ITESS(ph)LVEITEHK ddPTM_A549_PD325901_60min_R1 3 ITESSLVEITEHK 13 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 IT(0.084)ES(0.405)S(0.512)LVEITEHK;IT(0.017)ES(0.098)S(0.885)LVEITEHK;IT(0.016)ES(0.13)S(0.854)LVEITEHK 107.74 2.465e-05 7523200.0 1158.94 1143.88 1135.97 1056.94 1643.73 1202.29 1045.3200000000002 1040.54 730.842 1436.71 1386.92 True False 1276.5947356334646 1240.2787820472092 1213.0637553425363 1122.2247833150975 1528.280075360658 1192.4989488579783 1085.100224621052 1019.7856134121619 700.1272523115157 1345.9958854095378 1216.3376324102544 1.0495397837061136 1.019682980283619 0.9973084142260479 0.9226260484034634 1.2564604059255067 0.9804012611983088 0.8921044582587264 0.838406694193444 0.5756027221850949 1.1065972551900387 1.0 10.248328033996781 -7.891513215708927 2.414491267229556 0.7980166471496873 1.0421338352696181 0.13966748805270157 0.151214394989131 0.2698266665068327 3.207132493093878 0.02704214426153918 0.03882194323662384 1.2837687044185062e-08 7.891513215708927 0.24411718811993077 ITEVS(ph)CKSPQPESFK ddPTM_A549_PD325901_60min_R1 1 ITEVSCKSPQPESFK 15 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IT(0.072)EVS(0.485)CKS(0.38)PQPES(0.062)FK 48.111999999999995 0.0077065 6210400.0 3786.6 3999.8 4283.3 4371.0 3965.7 4321.9 4484.4 4644.7 3685.0 4069.1 4812.0 True False 4171.012844452413 4336.877183299319 4573.990495575307 4640.986742738748 3687.1629129222915 4286.703879321377 4655.05629595784 4552.05781480334 3530.1322649326894 3812.17633156305 4220.1545057812555 0.9883554828948745 1.0276583896059168 1.0838443211757594 1.0997196278906347 0.8737032987468089 1.0157694163682762 1.1030535231780747 1.0786471937383821 0.8364936070697663 0.9033262470226363 1.0 12.04308010365235 -8.74778557769618 24.98547207862551 0.9227886415984907 1.0338667458706459 0.3616589598786911 0.07103351690637019 227.64648247598066 416576.4036330776 0.014238318836999515 0.01610246047923162 1.7873698272799043e-09 8.74778557769618 0.11107810427215514 ITEVSCKS(ph)PQPESFK ddPTM_A549_PD325901_60min_R1 1 ITEVSCKSPQPESFK 15 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IT(0.059)EVS(0.383)CKS(0.494)PQPES(0.063)FK 47.808 0.0078637 6137900.0 4396.3 4296.5 4590.1 4109.3 5103.6 4612.5 4814.7 5175.6 5097.2 4734.8 4745.7 True False 4842.609139614992 4658.58113356806 4901.61178851358 4363.122128102573 4745.140742464181 4574.937329269503 4997.926043204933 5072.368597820343 4882.982409990476 4435.843919953979 4162.00898547093 1.1635268344013563 1.1193106862168254 1.1777033172260112 1.0483211697364672 1.1401082407627887 1.0992137079088622 1.2008446066916454 1.2187308137794435 1.173227262852237 1.0657939315938465 1.0 12.023064364411058 -10.725212505189546 1.002035995165856 1.0007910326638543 1.148300881764187 0.43737211526954456 0.04901420545210606 0.30924457050230847 0.5564298978104426 0.03183429121468869 0.008420253041532511 1.882727624199742e-11 10.725212505189546 0.14750984910033282 ITFCPSRS(ph)LDEADSENKEEVSPLGSK ddPTM_A549_PD325901_60min_R1 1 ITFCPSRSLDEADSENKEEVSPLGSK 26 2 Q6ZV73-2;Q6ZV73;F8VQX5 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 IT(0.203)FCPS(0.151)RS(0.646)LDEADSENKEEVSPLGSK 87.368 4.3449e-09 8530600.0 2867.0 3053.1 3407.7 2753.9 3609.2 3524.3 3136.2 3771.0 2651.4 3139.0 3547.5 True False 3158.0557294261525 3310.3954518553824 3638.9670141647725 2924.0021484393155 3355.7022430640563 3495.5992692779396 3255.549807194489 3695.7844467077293 2539.970878491867 2940.8030042949094 3111.179989455323 1.0150668685610298 1.0640321238485904 1.1696420735856718 0.9398370259353666 1.0785946986151522 1.1235606043769641 1.04640355692325 1.1879044154416645 0.8164011362571608 0.9452371814752378 1.0 11.603246145424189 -8.7645183965001 24.999969268863754 0.9133005399498532 1.0765731376704637 0.4547839189494648 0.07671788282998546 56.12652469898632 455716.5068106137 0.015124311885293987 0.016438464273338293 1.7198144892015559e-09 8.7645183965001 0.16327259772061053 ITGAQT(ph)LPK ddPTM_A549_PD325901_60min_R1 2 ITGAQTLPK 9 0 E9PMF9;Q7L1W4 E9PMF9 LRRC8D Volume-regulated anion channel subunit LRRC8D 1 IT(0.001)GAQT(0.999)LPK;ITGAQT(1)LPK 113.22 0.00026116 14934800.0 5997.6 6296.9 6270.0 7140.3 7455.5 7562.9 6975.8 7201.5 8752.1 8220.5 8803.400000000001 True False 6606.471936800236 6827.561861972473 6695.519904572919 7581.340114202119 6931.85140007871 7501.310249871506 7241.267886304227 7057.860433032541 8384.279673247596 7701.456227080691 7720.637609350524 0.855689940530182 0.884326166753839 0.8672236987867327 0.9819577731533856 0.8978340586383036 0.9715920665395059 0.93791060436955 0.9141551242457892 1.0859568985718653 0.9975155701846953 1.0 12.914504282137694 -8.748720852997181 24.99990499016253 1.0405907563098782 0.9157637366126747 0.5719592772414174 0.04351330990294485 113.33706747887963 222778.40334841836 0.008077062781309166 0.00912934277082469 1.783524777003798e-09 8.748720852997181 -0.12482701969720345 ITGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 ITGTPR 6 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 ITGT(1)PR;ITGT(1)PR 110.03 0.025664999999999997 238150000.0 6700.299999999999 6448.6 6779.4 6023.200000000001 8958.3 6651.3 6169.5 7272.799999999999 9342.900000000001 9682.2 11159.900000000001 True False 7831.146833392718 6776.806195802414 7740.820861073799 7498.884270391725 7640.545936988252 7355.136151224388 7290.418290698488 8303.741672015887 7226.748067545516 7494.984295420063 8388.588832428897 0.9335475834885123 0.8078600979469159 0.9227798638966623 0.8939387089044439 0.9108261341229605 0.8768025585889546 0.8690875707860345 0.9898854071753994 0.8614974713754122 0.8934737945964991 1.0 13.034212418844458 -10.931600064703627 0.933592403048811 1.0069978910889363 0.8931048919286212 0.0 0.053896360429902694 0.47681268804301724 0.6584468561185733 0.04000362227300204 0.0073163297871405315 1.1705768615640208e-11 10.931600064703627 -0.11389299916031514 ITHS(ph)PDSVK ddPTM_A549_MK2206_60min_R1 2 ITHSPDSVK 9 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 IT(0.006)HS(0.994)PDSVK;IT(0.002)HS(0.998)PDSVK 103.43 0.00020018 24771000.0 6390.299999999999 7092.6 6589.1 5721.4 8152.8 5836.9 5704.799999999999 5709.4 9302.900000000001 8951.8 8678.4 True False 7468.826412165051 7453.583045056014 7523.533459554146 7123.1432568434075 6953.5339199488535 6454.556883779354 6741.288315872713 6518.724934304189 7195.8080036786405 6929.58216270489 6523.313768344787 1.1449436095514038 1.1426068574572448 1.1533299986370507 1.0919516536839557 1.0659511663675854 0.9894598225676214 1.0334146961603587 0.9992965486248929 1.1030908920244213 1.0622794501057993 1.0 12.671389307809727 -6.569285756047541 2.165744264052279 1.0406764510442341 1.1468841586563725 0.7059754538701937 0.03152677162285869 0.18142649420313256 1.701425053354222 0.006144651845534943 0.01553335548183284 2.695964964130692e-07 6.569285756047541 0.10620770761213838 ITHS(ph)PDSVK ddPTM_A549_PD325901_60min_R1 2 ITHSPDSVK 9 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 IT(0.011)HS(0.989)PDS(0.001)VK;IT(0.003)HS(0.982)PDS(0.015)VK 121.68 3.7903e-05 47669000.0 9732.5 10378.0 10330.4 10600.7 12784.2 11007.7 11691.8 11092.2 11879.3 11921.8 11861.7 True False 10720.536235312184 11252.59048159417 11031.483065741646 11255.481163063516 11886.281895095743 10918.056940791303 12136.73784699845 10870.957369337444 11380.054332378528 11169.055513412886 10402.786097511545 1.0305447151197935 1.0816900757274925 1.0604354412689974 1.0819679514275453 1.1426056235010988 1.0495320040660083 1.1666814767922302 1.0450044120332236 1.093942932759211 1.0736600184526182 1.0 13.34468234548899 -10.713832055721948 0.7928240150967154 0.9953910796876124 1.0856262150048 0.05471417300252779 0.044256051776437134 0.5628350624905807 0.5761940138213374 0.032108563297013934 0.006828626903505486 1.9327155652130876e-11 10.713832055721948 0.09023513531718752 ITITNDK ddPTM_A549_MK2206_60min_R1 1 ITITNDK 7 0 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931;P17066 P11142;P54652;A0A0G2JIW1 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6 0 119.41 0.018723 15201000.0 10123.0 9931.5 8789.3 8289.8 12525.0 9450.2 8900.9 8785.9 12723.0 12718.0 13897.0 False True 11831.514916411881 10436.970929133715 10035.754903713598 10320.801372143267 10682.589091767173 10450.21389146493 10518.07831488421 10031.328230690287 9841.260814456069 9844.994966965396 10445.991362311883 1.1326368657644914 0.9991364694010075 0.9607278577619375 0.9880154993598512 1.0226496194807237 1.0004042248367429 1.0069009201780894 0.9603040901299555 0.9421088409054575 0.9424663132007918 1.0 13.350661795422328 -5.268386787916039 3.639378461808248 0.9791957840922274 1.1486704318096743 0.7470521526460889 0.025327393295117025 0.10942689423881334 2.640100825146123 0.0039185388953137485 0.04964910028959465 5.3903034173591715e-06 5.268386787916039 0.1694746477174469 ITITNDK ddPTM_A549_PD325901_60min_R1 2 ITITNDK 7 0 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931;P17066 P11142;P54652;A0A0G2JIW1 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6 0 ; 89.75200000000001 0.034947000000000006 21697000.0 9534.1 9614.3 8819.1 9117.5 10459.7 9106.1 9508.0 9672.1 10416.0 10281.5 10896.099999999999 False True 10501.994813366542 10424.530802388788 9417.617159556463 9680.667267655122 9725.046756006082 9031.942940717829 9869.83214297724 9479.182377884337 9978.251742615705 9632.324335348238 9555.948776068823 1.099000743878716 1.0908943786403684 0.9855240311816251 1.0130513980881348 1.0176955720357916 0.9451644365587984 1.032846907645056 0.991966637747501 1.0441926779269124 1.0079924621896974 1.0 13.222183405020841 -5.747056186311508 23.998356593826905 1.0125823376363727 1.0949476941527676 0.6358058423044732 0.025850626463156185 77.9204939087698 130006.31696300683 0.003763606979506448 0.014421511238995577 1.7903742116019044e-06 5.747056186311508 0.08236535651639487 ITITNDKGR ddPTM_A549_MK2206_60min_R1 2 ITITNDKGR 9 1 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931;P17066 P11142;P54652;A0A0G2JIW1 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6 0 ; 70.1 0.0037491 21335000.0 5493.799999999999 5706.4 6424.2 4769.0 7414.4 5318.9 5043.1 4790.5 8599.5 7855.3 7833.7 False True 6421.019129485681 5996.83138599493 7335.248159971428 5937.405214088544 6323.751581796289 5881.742467599926 5959.365991056255 5469.568045290956 6651.726980579652 6080.7822742572125 5888.376090878793 1.0904566947467849 1.0184185407729198 1.2457166537534632 1.0083264252237045 1.073938125588123 0.998873437569801 1.0120559385273347 0.9288754591887264 1.1296369114199931 1.0326755934758414 1.0 12.523654104005033 ITITNDKGR ddPTM_A549_PD325901_60min_R1 2 ITITNDKGR 9 1 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931;P17066 P11142;P54652;A0A0G2JIW1 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6 0 ; 88.681 0.0011236 40385000.0 8011.700000000001 7506.0 7648.2 7641.7 9116.5 9569.5 8299.6 8735.8 9143.9 9100.5 10088.5 False True 8825.04188609819 8138.556962309295 8167.252844362772 8113.710453440104 8476.188490217632 9491.569164757619 8615.445819715382 8561.557615897473 8759.613681768793 8525.89287689895 8847.678456270614 0.9974415243180113 0.9198522530552923 0.9230955763965851 0.9170440012644984 0.9580127184900468 1.072775102719817 0.9737521387443006 0.9676614784559265 0.9900465670246632 0.9636305070350285 1.0 13.111083240536122 -7.010544602066842 24.94453909386473 0.9967121162778148 0.9368940311250399 0.3678977772000651 0.034174888174485864 348.9950220730747 825592.4124165933 0.004514092564771101 0.008160576406927857 9.760125407420268e-08 7.010544602066842 -0.05981808515277487 ITITNDKGRLS(ph)KEDIER ddPTM_A549_PD325901_60min_R1 1 ITITNDKGRLSKEDIER 17 3 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 IT(0.011)IT(0.011)NDKGRLS(0.978)KEDIER 47.391999999999996 0.0042256 5360300.0 1338.8 1397.7 1343.8 1387.4 1747.4 1648.1 1659.6 1815.1 1642.4 1734.5 1627.1 True False 1474.7139904275307 1515.4890842285774 1434.998348925852 1473.0965469859846 1624.6686522027421 1634.6784200258141 1722.7569861679654 1778.8964065815953 1573.3756395998496 1624.9833739883777 1426.9770150367167 1.0334532195598019 1.062027676871574 1.0056212074929105 1.032319744090679 1.138538767676604 1.145553434148169 1.2072773198267934 1.2466188227536543 1.1025935407651721 1.1387593190816505 1.0 10.47874638152229 -6.716573011330532 24.383944461432186 1.0896172829353965 1.0334223137456684 0.16606595219351816 0.07149221241573464 225.84432240984836 122740.15466809331 0.013016644467198645 0.02709619943965053 1.9205560607100157e-07 6.716573011330532 -0.056194969189728106 ITITNDQNR ddPTM_A549_PD325901_60min_R1 1 ITITNDQNR 9 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 86.882 0.00091893 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ITKPGS(ph)IDSNNQLFAPGGR ddPTM_A549_MK2206_60min_R1 2 ITKPGSIDSNNQLFAPGGR 19 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 IT(0.026)KPGS(0.974)IDS(0.001)NNQLFAPGGR;IT(0.029)KPGS(0.97)IDSNNQLFAPGGR 88.22200000000001 1.2222000000000002e-07 5431300.0 2588.4 3234.8 3435.3 3218.2 5262.2 4833.2 4002.7 3073.5 6369.1 4987.3 4006.1 True False 3025.2586396957913 3399.4375030520832 3922.4771962189607 4006.659144470488 4488.137350794188 5344.6460159814915 4729.938778211982 3509.1780371989885 4926.509019362738 3860.665466169719 3011.274807264709 1.004643824734078 1.1289031126787001 1.302596889116853 1.330552473923805 1.490444292884377 1.7748782021114504 1.5707429845994099 1.165346327320604 1.6360210657219065 1.2820701242064831 1.0 11.556158658279957 -5.656438681469947 1.888176974300992 1.3648542087384525 0.9958125128039788 0.27190526607361987 0.20906406583139944 0.6304219752997274 3.781700875386212 0.03921072704705719 0.30994532048645873 2.2057755503573816e-06 5.656438681469947 -0.3690416959344738 ITKPGS(ph)IDSNNQLFAPGGR ddPTM_A549_PD325901_60min_R1 1 ITKPGSIDSNNQLFAPGGR 19 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 IT(0.024)KPGS(0.972)IDS(0.004)NNQLFAPGGR 109.08 2.4723e-10 13228000.0 4212.5 4427.2 4702.8 5515.2 6131.9 5552.2 5195.5 6278.3 5690.5 5454.1 5643.2 True False 4640.149898921405 4800.295681259749 5021.960288233736 5855.861378072009 5701.216497906602 5506.984724026045 5393.217595586686 6153.074381268933 5451.348074246802 5109.727195197473 4949.122175192182 0.9375702871471789 0.969928708836804 1.0147173802672844 1.1832121274808935 1.1519651962694202 1.1127194943034924 1.089732159497004 1.2432658082501267 1.1014777734871977 1.032451213431411 1.0 12.272956942015163 -5.975522959785297 4.315630201548625 1.0856071437740782 0.9578050380946579 0.43100509368304873 0.0679536425025727 0.19686846922558596 8.636193303772417 0.01134905031785002 0.03638964464626223 1.0579789824916525e-06 5.975522959785297 -0.1278021056794203 ITKPGSIDSNNQLFAPGGRLS(ph)WGK ddPTM_A549_MK2206_60min_R1 2 ITKPGSIDSNNQLFAPGGRLSWGK 24 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ITKPGSIDSNNQLFAPGGRLS(1)WGK;ITKPGSIDSNNQLFAPGGRLS(1)WGK 213.77 9.365799999999997e-75 24279900.0 5145.200000000001 5049.6 4033.7000000000003 3519.4 5999.0 5158.8 4576.1 4621.700000000001 6485.8 7693.200000000001 7459.9 True False 6013.58397193741 5306.603071414552 4605.739314292328 4381.65315799187 5116.555046827246 5704.700791865705 5407.518136002162 5276.840128362637 5016.776655694344 5955.300776840554 5607.400947233969 1.0724369504741413 0.9463569880859338 0.8213679309955991 0.7814053603841654 0.912464632897555 1.0173520398393718 0.9643537508530745 0.9410491915984014 0.8946705796326248 1.0620429737199724 1.0 12.453116515498111 -7.015963083826993 24.28931679670339 0.9541511018173504 0.8953935478501382 0.12154551483838749 0.08200086482804601 907.8529451754952 1381385.294093864 0.011986574411956684 0.021173466290918264 9.639109551076649e-08 7.015963083826993 -0.05875755396721216 ITKPGSIDSNNQLFAPGGRLS(ph)WGK ddPTM_A549_PD325901_60min_R1 2 ITKPGSIDSNNQLFAPGGRLSWGK 24 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ITKPGSIDSNNQLFAPGGRLS(1)WGK;ITKPGSIDSNNQLFAPGGRLS(1)WGK 198.28 6.230599999999998e-62 37421000.0 7930.8 8280.3 7486.5 8157.799999999999 7518.2 9719.7 7241.9 8792.4 9601.5 10060.9 10752.3 True False 8735.928977653617 8978.109940715376 7994.578909981686 8661.688778291964 6990.147568381973 9640.54598575627 7517.494467419732 8617.02868449563 9197.982345115664 9425.653056996061 9429.835264445514 0.9264137424109392 0.9520961595762617 0.8477962430716733 0.9185408371819825 0.7412799240234662 1.0223451115954512 0.7972031596102088 0.9138047954014096 0.975412834601254 0.999556491992472 1.0 13.203016852461351 -8.731861596418755 3.442309469586232 0.9892882624467444 0.8865724936867179 0.2919115416245539 0.07156408252258097 0.2011079911294069 4.888789600213448 0.011476966301122382 0.012644161740767724 1.8541224121694273e-09 8.731861596418755 -0.10271576876002653 ITLDNAYMEK ddPTM_A549_MK2206_60min_R1 3 ITLDNAYMEK 10 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BT25;H3BUW1;H3BTJ2 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 113.47 0.00029556 13137500.0 10720.1 12939.6 12482.9 10895.2 16512.600000000002 12812.6 12356.099999999999 12707.9 18268.300000000003 17862.5 17071.1 False True 12529.390798718454 13598.17037049979 14253.162923960552 13564.524489104115 14083.618414108952 14168.420827684455 14601.043430050993 14509.283741311547 14130.559218480532 13827.348843954973 12831.874731608437 0.9764271441845608 1.0597181358857686 1.1107623182177029 1.0570960808782648 1.0975495559832054 1.104158287392234 1.1378729714438847 1.1307220530739122 1.1012076967734947 1.077578228681925 1.0 13.647444342526505 -4.477599359542122 16.33874563383837 1.0668020233202822 1.0755584257004225 0.0 0.049986044851959475 751268.4114579448 0.043330376533146774 0.007859874348316693 3127565.0862957737 3.3296657623524613e-05 4.477599359542122 0.008756402380140305 ITLDNAYMEK ddPTM_A549_PD325901_60min_R1 4 ITLDNAYMEK 10 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BT25;H3BUW1;H3BTJ2 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 115.18 0.00024038 35263100.0 27644.699999999997 26679.699999999997 27668.399999999998 27886.4 32119.5 31880.8 27488.2 31794.899999999998 31818.6 30174.5 31293.1 False True 30451.169593047463 28928.091951415296 29546.14400760533 29608.879593390495 29863.537126259565 31621.173334845567 28534.278493120215 31160.72577688348 30481.37489416208 28269.27692038763 27444.247083304952 1.109564766000511 1.054067610731176 1.0765878880889035 1.078873816560351 1.0881529027052934 1.152196787868214 1.0397180293016075 1.1354192258325555 1.1106653719316166 1.0300620321110783 1.0 14.744216139919233 -10.756314445566597 0.9782946794950451 0.9993140486074512 1.0935640459207387 0.4618312959875954 0.03233019788619234 0.3268524686587598 0.5493280129431478 0.021599781273152985 0.0053551671152567495 1.752611085890319e-11 10.756314445566597 0.09424999731328754 ITLVSSGS(ph)GTMGAAK ddPTM_A549_MK2206_60min_R1 2 ITLVSSGSGTMGAAK 15 0 A0A140T974;A0A140T9W4;A0A140T9R1;O75955-2;O75955 A0A140T974 FLOT1 Flotillin-1 1 ITLVS(0.008)S(0.084)GS(0.829)GT(0.08)MGAAK;ITLVS(0.061)S(0.417)GS(0.509)GT(0.013)MGAAK 79.875 0.00015101 2066700.0 1519.6 1723.2 2098.9 1776.4 2338.0 1920.0 1571.3 1878.5 2313.6 2579.2 2719.1 True False 1776.0713293469803 1810.903519617704 2396.5555809227662 2211.6180797456277 1994.0832971298712 2123.173125607147 1856.7848707633564 2144.7831276649754 1789.573294060014 1996.5569286678056 2043.8724266577128 0.8689736728095794 0.8860159254553004 1.1725563443515827 1.0820724673908462 0.9756398056559429 1.0387992410461315 0.9084641715137302 1.0493723090008504 0.8755797430011094 0.9768500727477981 1.0 10.99708943437593 -7.756493637337642 24.984631378765982 0.9473481164848654 1.008566222175566 0.03861226199341228 0.09020832439902947 254.80662081790356 1287211.3725727194 0.014810388948800336 0.021588141610069406 1.7518881001824203e-08 7.756493637337642 0.06121810569070063 ITPEEAK ddPTM_A549_PD325901_60min_R1 2 ITPEEAK 7 0 P62701 P62701 RPS4X 40S ribosomal protein S4, X isoform 0 ; 83.75299999999999 0.039796 18442700.0 10039.7 9952.0 9471.8 9365.1 11584.7 10102.7 9602.8 10263.2 10931.9 11047.7 11729.7 False True 11058.922953163496 10790.689966547043 10114.613306560406 9943.56095731472 10771.030637045387 10020.426960739509 9968.239808853781 10058.492424675358 10472.470259706288 10350.14633658773 10287.021260694604 1.0750364632197495 1.0489615694464336 0.9832402451822524 0.9666122685395623 1.0470504885802192 0.9740844027440948 0.9690112964907688 0.977784741546863 1.0180274730956629 1.0061363804247512 1.0 13.328537671348924 -5.608759202046435 4.505293097006258 1.0002779052279183 1.069580368774737 0.5481651602628166 0.023747940357194262 0.1184363391368299 4.223605831455476 0.0033687034444899733 0.01465578707057367 2.4617321523604585e-06 5.608759202046435 0.06930246354681868 ITPHT(ph)SPAPR ddPTM_A549_MK2206_60min_R1 2 ITPHTSPAPR 10 0 A0A0C4DFZ9;Q58A45-2;Q58A45-4;Q58A45-3;Q58A45 A0A0C4DFZ9 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 1 IT(0.001)PHT(0.499)S(0.499)PAPR;IT(0.148)PHT(0.426)S(0.426)PAPR 81.709 0.00097835 26307000.0 2407.71 2074.23 2206.44 2110.23 2916.8 2375.32 2179.3 2245.25 3392.7 3512.2000000000003 3843.2999999999997 True False 2814.0725851421575 2179.799447247347 2519.3463699896274 2627.2364447318255 2487.7425838615964 2626.674785790194 2575.250600683881 2563.5210632897465 2624.258867028618 2718.791580671164 2888.90254031613 0.9740974456113761 0.7545423969230937 0.8720773147694826 0.909423702623187 0.8611375943438248 0.9092292831390427 0.8914286877957724 0.8873684824996633 0.9083930075195433 0.94111571530331 1.0 11.496305818791583 -10.77632868022149 0.279381147919001 1.062548145611346 0.8620026116856336 0.2624068345804761 0.0524963106418983 2.782853916346721 0.2736527069047777 0.18379763439543942 0.027066577233791692 1.6736757350655162e-11 10.77632868022149 -0.20054553392571228 ITPHT(ph)SPAPR ddPTM_A549_PD325901_60min_R1 2 ITPHTSPAPR 10 0 A0A0C4DFZ9;Q58A45-2;Q58A45-4;Q58A45-3;Q58A45 A0A0C4DFZ9 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 1 IT(0.001)PHT(0.976)S(0.023)PAPR;IT(0.004)PHT(0.498)S(0.498)PAPR 100.04 0.00041046 52712000.0 8530.5 7869.200000000001 7694.4 7278.4 7709.0 6989.3 6875.799999999999 6333.7 7042.7 8278.8 9439.8 True False 9396.510080177812 8532.365100959802 8216.588254185943 7727.970237554265 7167.546434606238 6932.381458095027 7137.462331582128 6207.3693848084695 6746.719810648967 7756.0751551311505 8278.764443822507 1.135013581306731 1.0306326697489898 0.9924896776495484 0.9334690327275543 0.8657748971169915 0.8373690911411145 0.8621410090859631 0.7497941784586367 0.8149428403755672 0.9368638530256311 1.0 13.015199754828785 -5.740420425194186 1.134737959353806 0.8863460341696746 1.1508860380708406 0.6364137159296769 0.0639116643774097 0.5823471468009518 0.9962242174980213 0.012955328200917627 0.1489320030289926 1.8179401226805292e-06 5.740420425194186 0.26454000390116594 ITPPAAKPGS(ph)PQAK ddPTM_A549_MK2206_60min_R1 4 ITPPAAKPGSPQAK 14 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 IT(0.015)PPAAKPGS(0.985)PQAK;ITPPAAKPGS(1)PQAK;ITPPAAKPGS(1)PQAK;IT(0.001)PPAAKPGS(0.999)PQAK 115.2 1.1295e-06 607535800.0 26270.07 26857.75 26018.56 22368.64 33826.799999999996 24581.37 23582.92 24153.82 35741.619999999995 36415.8 36853.92 True False 30703.81557445265 28224.6947562746 29708.383046154595 27848.9578041664 28850.922530090993 27182.554257607168 27867.631301739053 27577.69795297145 27646.20013763886 28189.445488128487 27702.07454755222 1.1083579867546658 1.0188657426296819 1.072424485579895 1.005302247539694 1.0414715504633671 0.9812461594147663 1.0059763305416944 0.9955102064877029 0.997983024346518 1.0175933011709888 1.0 14.757706400134222 -2.000000000000001 0.4073859323971882 0.9976239306624931 2.6838861499279285 0.6377678464709468 0.02175105555491826 24.14848301114006 0.2777418738876329 0.003974201152556209 33.26988050586624 0.00999999999999998 2.000000000000001 1.6862622192654353 ITPPAAKPGS(ph)PQAK ddPTM_A549_PD325901_60min_R1 4 ITPPAAKPGSPQAK 14 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 ITPPAAKPGS(1)PQAK;ITPPAAKPGS(1)PQAK;ITPPAAKPGS(1)PQAK;ITPPAAKPGS(1)PQAK 126.84 2.9623e-08 1012835100.0 28944.8 28803.92 28383.3 29376.5 32160.5 31080.850000000002 32233.6 32559.4 33679.5 32490.600000000002 36006.17 True False 31883.254787964426 31231.32742576605 30309.561420648257 31191.01968612787 29901.65742770187 30827.73786242297 33460.26728690273 31909.977224644812 32264.067738616148 30439.137971119522 31577.63935191727 1.0096782230185488 0.9890330014130649 0.9598425354999812 0.987756536786024 0.946925040673959 0.976252135850403 1.059619020725536 1.0105244685653605 1.021737799303139 0.9639459628976786 1.0 14.946615703294187 -7.627047466049219 22.276566668780305 1.014090569442373 0.9768946039641004 0.28199552344548695 0.025913790651245317 3.6822225031250424 775.6054553173701 0.0032679490399659694 0.0048471533348152405 2.36022025971312e-08 7.627047466049219 -0.03719596547827253 ITPPAAKPGSPQAK ddPTM_A549_MK2206_60min_R1 2 ITPPAAKPGSPQAK 14 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 0 ; 73.02199999999999 0.0011609 11171500.0 3297.4 4167.6 3645.2 3525.3 4526.5 3614.8 3554.1 3416.8 4925.4 5099.8 5222.0 False True 3853.9205063100408 4379.713038741143 4162.144172461607 4388.9986582567335 3860.65784621829 3997.315736689959 4199.8339649844365 3901.141863511145 3809.8047642475785 3947.751638035078 3925.2332801318767 0.9818322202191662 1.1157841397375488 1.0603558757969591 1.1181497620720457 0.9835486379267077 1.0183638656390024 1.0699578000223553 0.9938624242429938 0.9705932086970331 1.0057368202845882 1.0 11.938562681873588 -7.7652831328673315 0.8183756696493047 0.9860624463603376 1.0638685067799951 0.23988483724563314 0.044433643697201174 0.47510264076360226 0.6415159323763316 0.00841755640648362 0.015193739236980431 1.7167887832202332e-08 7.7652831328673315 0.07780606041965754 ITPPAAKPGSPQAK ddPTM_A549_PD325901_60min_R1 2 ITPPAAKPGSPQAK 14 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 0 ; 77.527 0.00072141 6698800.0 4302.4 4337.799999999999 4116.1 4355.8 5306.799999999999 4767.3 4375.2 5305.0 4627.0 4962.9 4488.5 False True 4739.1764807405225 4703.361629510422 4395.443298120032 4624.847873260453 4934.068675466126 4728.47668939328 4541.700630201306 5199.1876133080095 4432.543280825932 4649.541647026185 3936.442954945795 1.2039235764324143 1.1948252987131596 1.1166028184398158 1.174879942677624 1.2534332980151284 1.2012054394062448 1.1537575120947854 1.3207831722229548 1.1260275663989567 1.1811530613404277 1.0 11.94267685618966 -9.686438374214312 0.9507523803746609 1.0197967683879738 1.197321338808188 0.12364724241956548 0.07264638875705225 0.21792329779807923 0.4103645866095617 0.017803612014316114 0.011274982474944795 2.0585509753516257e-10 9.686438374214312 0.1775245704202142 ITPSYVAFTPEGER ddPTM_A549_MK2206_60min_R1 2 ITPSYVAFTPEGER 14 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 176.42 1.804e-22 7080500.0 4149.6 4123.4 3935.4 4071.8999999999996 5602.5 4132.6 3542.0 4059.3 6428.6 6228.700000000001 6567.4 False True 4849.951032020423 4333.263447534607 4493.498896166304 5069.515682794538 4778.379671586872 4569.908989002136 4185.535551609375 4634.718206084873 4972.532364364718 4821.632343979974 4936.533328980865 0.9824609110907558 0.8777948326805277 0.9102539366616563 1.0269384089909765 0.9679626071872094 0.9257324289038239 0.8478693999769811 0.9388609166023191 1.007292371586456 0.9767243574906418 1.0 12.269282552226969 -8.741888379000443 7.08480396014233 1.0034833024336025 0.9328547932899768 0.23923183902119338 0.0468353027577758 0.14340982439166938 29.843924478851818 0.008062622891024386 0.00899921422409816 1.8118056973754145e-09 8.741888379000443 -0.07062850914362573 ITPSYVAFTPEGER ddPTM_A549_PD325901_60min_R1 2 ITPSYVAFTPEGER 14 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 174.84 2.4449e-22 12031600.0 6298.1 6798.0 6957.7 7407.0 9054.3 7949.6 7418.400000000001 8639.9 8714.1 8173.6 8487.0 False True 6937.47847558383 7370.891317583071 7429.891362048964 7864.513567482478 8418.357203639283 7884.8610932814845 7700.711271504243 8467.570416629575 8347.876681099035 7657.517501084693 7443.152803525668 0.9320618101911987 0.9902915487764314 0.9982183032074228 1.056610521788189 1.131020338538755 1.0593442458344517 1.0346034099765593 1.1376322158291123 1.1215511627202948 1.0288002548405946 1.0 12.861698138593683 -5.933073063519387 1.6532565040129013 1.0680866935232827 0.9474863736324004 0.5197729781510532 0.04308009556616801 0.3350555865188163 1.6537902751358569 0.007819392201754772 0.04257145978314541 1.1666133353905438e-06 5.933073063519387 -0.12060031989088227 ITQVSAPPAGS(ph)MTPK ddPTM_A549_MK2206_60min_R1 1 ITQVSAPPAGSMTPK 15 0 H0Y6R1;Q9UBP9-3;Q9UBP9-4;Q9UBP9 H0Y6R1 GULP1 PTB domain-containing engulfment adapter protein 1 1 ITQVSAPPAGS(0.6)MT(0.4)PK 85.734 9.9675e-05 2058500.0 1485.2 1579.4 1386.6 1418.1 1858.0 1185.6 1135.7 1293.5 2304.7 2645.1 2144.9 True False 1735.8654503462335 1659.7847138371646 1583.2407301479382 1765.534563660929 1584.6906612777175 1311.0594050624147 1342.0419892610857 1476.8575861776126 1782.689129849634 2047.570072898267 1612.2621337715173 1.0766645286679124 1.029475715561513 0.9819995749973423 1.0950666933613742 0.9828988897547928 0.8131800515561897 0.8323968920126447 0.9160157986982198 1.105706753578242 1.2699982403658185 1.0 10.654870611869743 -5.35409808397072 3.06892882731723 1.006712523086423 1.081260446222532 0.031061597848464517 0.12220727174290458 1.0056005643712032 14.813062499860946 0.015122355481662603 0.15862308693230728 4.424884265308514e-06 5.35409808397072 0.07454792313610903 ITQVSAPPAGS(ph)MTPK ddPTM_A549_PD325901_60min_R1 1 ITQVSAPPAGSMTPK 15 0 H0Y6R1;Q9UBP9-3;Q9UBP9-4;Q9UBP9 H0Y6R1 GULP1 PTB domain-containing engulfment adapter protein 1 1 ITQVSAPPAGS(0.682)MT(0.318)PK 85.42 4.1567e-05 3805200.0 1184.8 1281.9 1418.1 1316.4 1287.3 1395.4 1602.0 1372.5 1510.2 1195.3 1504.4 True False 1305.0800237963392 1389.9302118284406 1514.340793728048 1397.711038238685 1196.8844889439108 1384.0363250433957 1662.9649866480374 1345.1244107945788 1446.731545861966 1119.8285540088264 1319.3683371773323 0.9891703378212323 1.0534815583054458 1.1477771226250901 1.059378945859016 0.9071647812198795 1.0490143548574271 1.2604251138888165 1.0195215186627484 1.0965334737053911 0.8487611248914743 1.0 10.365631672629219 -5.2670935554754275 6.595160038072611 1.05740932619357 0.9880167251153166 0.0082950667418763 0.10524093505492117 0.2964156146546535 81.24581213994105 0.011619266030282852 0.09201976936215295 5.406378464965812e-06 5.2670935554754275 -0.0693926010782534 ITQVSAPPAGSMT(ph)PK ddPTM_A549_MK2206_60min_R1 3 ITQVSAPPAGSMTPK 15 0 H0Y6R1;Q9UBP9-3;Q9UBP9-4;Q9UBP9 H0Y6R1 GULP1 PTB domain-containing engulfment adapter protein 1 1 ITQVSAPPAGS(0.208)MT(0.792)PK;ITQVS(0.001)APPAGS(0.153)MT(0.847)PK;ITQVS(0.104)APPAGS(0.251)MT(0.645)PK 95.34700000000001 9.3602e-06 9701300.0 2803.29 3073.8599999999997 3188.67 2932.91 4154.5 3418.85 3112.48 2735.59 4700.1 4805.700000000001 4761.200000000001 True False 3276.416818139706 3230.3063444824 3640.8713536714467 3651.473081663332 3543.378553432873 3780.6304377510396 3677.977327406309 3123.368259893017 3635.5348545174065 3720.0890322963987 3578.862637564894 0.915491079134857 0.9026069652900519 1.0173263749929067 1.0202886926523234 0.9900850947003194 1.0563776318398828 1.0276944660577567 0.8727264989466592 1.015835259045056 1.0394612504121132 1.0 11.80528545655079 -5.7586887788205425 24.99868855751113 1.0034283905618593 0.9090489865143723 0.3961134526413914 0.04540521772213963 49.0232631821617 445518.91076766275 0.0058569003558441544 0.020836750619087584 1.7430555226191695e-06 5.7586887788205425 -0.09437940404748701 ITQVSAPPAGSMT(ph)PK ddPTM_A549_PD325901_60min_R1 1 ITQVSAPPAGSMTPK 15 0 H0Y6R1;Q9UBP9-3;Q9UBP9-4;Q9UBP9 H0Y6R1 GULP1 PTB domain-containing engulfment adapter protein 1 1 ITQVSAPPAGS(0.008)MT(0.992)PK 112.34 8.595700000000001e-07 4979400.0 1296.3 1155.7 965.96 1233.8 1534.0 1567.7 1221.6 1390.6 1460.4 1669.0 1371.6 True False 1427.8994217143772 1253.094894929503 1031.5158543893558 1310.0090238368944 1426.2571320127079 1554.9331709692785 1268.08865648517 1362.8633920954046 1399.0244666778012 1563.619055166678 1202.9018952887723 1.1870456163605856 1.0417265945272132 0.857522844073437 1.0890406183310648 1.1856803431757137 1.2926516925937643 1.054191253211675 1.1329796697745094 1.1630412024099 1.299872467813604 1.0 10.232303270524547 -5.243014444369173 22.20440662250946 1.0860654264492335 1.1870460270363463 0.0 0.12397595294760065 1956.8759910372353 2358104.6399888564 0.01569468767481976 0.5820788398363033 5.714596299575849e-06 5.243014444369173 0.10098060058711278 ITRT(ph)PQASTYSYETSDLCYTAEK ddPTM_A549_PD325901_60min_R1 1 ITRTPQASTYSYETSDLCYTAEK 23 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 IT(0.29)RT(0.692)PQAS(0.009)T(0.009)YSYETSDLCYTAEK 135.47 1.1101999999999999e-22 17125000.0 2896.9 3021.9 3783.0 2974.6 3673.2 2827.3 2701.1 3080.6 2633.4 3449.3 3420.9 True False 3190.991155414933 3276.566118358973 4039.737129027009 3158.3342861932456 3415.2071038520703 2804.2754061883265 2803.8918385986335 3019.155016316051 2522.727355895183 3231.510609338781 3000.150986871801 1.0636101880799398 1.092133740167319 1.3465112745006091 1.0527251128405306 1.1383450762299936 0.9347114256780423 0.9345835762493397 1.0063343576797998 0.8408667986825495 1.0771159929881442 1.0 11.55081939289319 -7.259354795555074 5.479440797128477 0.9310124219072516 1.143779580631267 0.43051679318729397 0.09458944419875116 0.09882921711924428 10.919205660926249 0.01356401931288385 0.022819680909450024 5.503578994895144e-08 7.259354795555074 0.2127671587240153 ITS(ph)PLMEPSSIEK ddPTM_A549_MK2206_60min_R1 3 ITSPLMEPSSIEK 13 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 IT(0.083)S(0.917)PLMEPSSIEK;IT(0.102)S(0.893)PLMEPS(0.005)SIEK;IT(0.098)S(0.898)PLMEPS(0.004)S(0.001)IEK 100.55 5.6258e-05 10041100.0 5006.8 6855.700000000001 6144.4 5246.700000000001 8150.0 5467.400000000001 6219.7 6809.9 8873.6 9159.400000000001 9183.699999999999 True False 5851.825435492543 7204.625846937728 7015.768312650364 6532.141735533318 6951.145796239717 6045.956639033605 7349.738980899163 7775.224179444091 6863.743768227413 7090.28517852043 6903.1338327742415 0.8477056330140427 1.0436746587082062 1.0163164270901666 0.9462574381102751 1.0069550967181786 0.8758278175528066 1.0646960002433328 1.1263325277759206 0.9942938865881732 1.0271110701718753 1.0 12.753035739104314 -7.797076767258819 24.999633607841 1.0135615238931241 0.9647003779049865 0.2440517730826387 0.06652660683640563 304.2656319883572 213441.33341059656 0.010331601174734997 0.01427541190347224 1.5955970795486927e-08 7.797076767258819 -0.04886114598813762 ITS(ph)PLMEPSSIEK ddPTM_A549_PD325901_60min_R1 2 ITSPLMEPSSIEK 13 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 IT(0.023)S(0.977)PLMEPSSIEK;IT(0.012)S(0.988)PLMEPSSIEK 184.11 3.6991999999999997e-25 15871300.0 9444.099999999999 9456.8 9703.0 9396.0 10843.6 8901.599999999999 10120.6 10369.9 9741.0 11422.1 12013.1 True False 10402.85807962104 10253.757724642488 10361.50392887895 9976.369580135732 10081.982944389174 8829.10832091607 10505.744971204822 10163.064209470826 9331.619645239984 10700.906656692225 10535.564857315223 0.9874039238055623 0.9732518249861974 0.9834787284029279 0.9469230853065062 0.9569475468027601 0.8380289467617582 0.9971695977848121 0.9646435048439044 0.885725613350546 1.015693681507945 1.0 13.36298004491506 -6.3155873760534975 3.887444402066222 0.9428335447555003 0.9808638465991298 0.055969853518105794 0.049148101921738845 0.44868261366233536 13.955995572529371 0.007382272851089136 0.018617983398206292 4.835179751481335e-07 6.3155873760534975 0.038030301843629544 ITS(ph)PNIR ddPTM_A549_PD325901_60min_R1 2 ITSPNIR 7 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 IT(0.071)S(0.929)PNIR;IT(0.068)S(0.932)PNIR 85.666 0.011138 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 ITS(ph)PSLK ddPTM_A549_PD325901_60min_R1 1 ITSPSLK 7 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 IT(0.239)S(0.755)PS(0.005)LK 85.161 0.013729 4421800.0 2193.5 2428.8 2264.1 2305.3 3094.1 3241.4 2496.7 2870.6 3506.1 2824.0 3102.0 True False 2416.182505230646 2633.4834998743427 2417.7554411393207 2447.6931452838344 2876.7810900655268 3215.003113082747 2591.7132847466632 2813.343631057864 3358.75080979118 2645.6921580531457 2720.473665198141 0.8881477281474317 0.9680238899436423 0.8887259127219772 0.8997305052411013 1.0574559595510737 1.181780641441566 0.9526698669799107 1.0341374250549706 1.234619857842495 0.9725115857206621 1.0 11.409642147512365 -6.841794660955464 4.535587004046806 1.0988753670074431 0.9134436161960499 0.37844503532521045 0.08602657171286202 0.15613368561654542 5.922720281884811 0.01448367632837503 0.0283139921509945 1.4394790183549202e-07 6.841794660955464 -0.1854317508113933 ITVHKIS(ph)PQHR ddPTM_A549_MK2206_60min_R1 2 ITVHKISPQHR 11 1 F8WFC3;C9JUD5;Q96LZ7 F8WFC3 RMDN2 Regulator of microtubule dynamics protein 2 1 IT(0.01)VHKIS(0.99)PQHR;IT(0.024)VHKIS(0.976)PQHR 90.70700000000001 0.00012576 22405000.0 3454.3 3980.6 3681.1 3364.5 4969.2 3241.9 3245.3 3211.8999999999996 5220.200000000001 5524.3 5789.8 True False 4037.301390473335 4183.195537482723 4203.13533228586 4188.802651038141 4238.237262659434 3584.9557062009435 3834.9290021563825 3667.196661031213 4037.833034946441 4276.356793207023 4352.032869649088 0.9276817320543054 0.9612049501409261 0.965786669856831 0.96249333966448 0.9738523098519637 0.8237427918346593 0.881181074918122 0.8426399273328341 0.9278038920859571 0.9826113270031054 1.0 12.087473737551042 -10.251752817261458 1.0282815419804507 0.9935353927193499 0.9195074153938947 0.24805055642639906 0.04834050551366606 0.5167502834107874 1.0798729778151206 0.021954036956962745 0.009737076301356097 5.600762834153807e-11 10.251752817261458 -0.07402797732545519 ITVHKIS(ph)PQHR ddPTM_A549_PD325901_60min_R1 2 ITVHKISPQHR 11 1 F8WFC3;C9JUD5;Q96LZ7 F8WFC3 RMDN2 Regulator of microtubule dynamics protein 2 1 ITVHKIS(1)PQHR;IT(0.016)VHKIS(0.984)PQHR 99.48100000000001 0.00011520000000000001 36984000.0 5199.299999999999 4868.6 4616.1 4937.200000000001 6143.6 6070.0 5045.6 6055.1 5724.1 6210.799999999999 6096.4 True False 5727.12910847764 5278.894008353189 4929.376304864281 5242.1596308052485 5712.09473026941 6020.567932502088 5237.6130690582595 5934.326280365942 5483.535983093952 5818.64902805824 5346.581448263687 1.0711758838608054 0.9873400525989406 0.9219678691072978 0.9804694235991954 1.0683639229183397 1.1260593316982537 0.9796190556040598 1.1099290897912208 1.0256153462086959 1.0882933486308075 1.0 12.384401025892855 -6.725547017595425 24.984284232599613 1.029396124538287 0.98515478744277 0.1425180625197472 0.05688252423630038 297.4075273475807 207020.68511236712 0.007903086807055702 0.016451072589239335 1.8812780242446192e-07 6.725547017595425 -0.04424133709551703 ITVNGDS(ph)SAEAEELANEI ddPTM_A549_MK2206_60min_R1 2 ITVNGDSSAEAEELANEI 18 0 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 1 ITVNGDS(0.853)S(0.147)AEAEELANEI;ITVNGDS(0.873)S(0.127)AEAEELANEI 188.27 6.5468e-40 13500700.0 911.0899999999999 1093.66 1144.4699999999998 1140.87 1878.5 1274.67 954.06 1515.99 1753.1100000000001 1334.3200000000002 1838.4 True False 1064.8597179881165 1149.3226226004515 1306.7730552664157 1420.3832012156006 1602.1751384339027 1409.5547333425343 1127.4003524473287 1730.8862250246625 1356.033384141404 1032.896185274514 1381.8745427411798 0.7705907338561927 0.8317127112860604 0.94565245602847 1.027866971482109 1.1594215602638716 1.020030899872029 0.8158485575766822 1.252563942303445 0.981299924269163 0.7474601733566864 1.0 10.432410927319497 -5.784734133232538 2.2930737208495864 1.0128772939712924 0.7784560333137701 0.25158866929351387 0.13148833009298397 0.23581168687412601 2.3700944342839008 0.01396899102164247 0.07213851435315934 1.6415944183312712e-06 5.784734133232538 -0.23442126065752233 ITVNGDS(ph)SAEAEELANEI ddPTM_A549_PD325901_60min_R1 1 ITVNGDSSAEAEELANEI 18 0 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 1 IT(0.002)VNGDS(0.825)S(0.173)AEAEELANEI 75.97 0.00046657 46075000.0 1188.7 1094.0 1235.6 1183.3 1415.4 1081.2 1383.6 1386.9 997.73 1520.1 1496.2 True False 1309.3759489253102 1186.1952193933346 1319.4552462663953 1256.3897535307158 1315.9871868649202 1072.3950656707173 1436.253655134971 1359.2371914979972 955.7988777995363 1424.1206265781113 1312.176885193249 0.9978654278249031 0.9039903329943503 1.0055467834826814 0.9574850522882689 1.0029038018537493 0.8172641034693899 1.0945579603952929 1.0358643006410049 0.728407037637134 1.0853114718358843 1.0 10.357746497141003 -8.72353483679885 24.999512101028394 0.8717474812848768 0.9742726918603006 0.0 0.10999773751380719 235.7359037611292 155476.77641776972 0.019206828524345403 0.02177828575042563 1.890014618162465e-09 8.72353483679885 0.10252521057542385 ITVQAS(ph)PNLDK ddPTM_A549_MK2206_60min_R1 2 ITVQASPNLDK 11 0 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 ITVQAS(1)PNLDK;ITVQAS(1)PNLDK 127.71 1.1882e-07 22332000.0 4545.1 5818.5 5566.1 4484.3 6981.9 5012.4 4561.3 4707.9 7167.1 7651.200000000001 7971.799999999999 True False 5312.201762973784 6114.636797177118 6355.456676818436 5582.953701307876 5954.871758867 5542.808841038159 5390.029167576464 5375.259242339069 5543.763293506884 5922.788606010823 5992.182049512694 0.8865220914651268 1.0204357522272511 1.060624764785857 0.931706289157537 0.9937735051543154 0.9250067496679144 0.8995102490276978 0.8970453831215299 0.9251660326237456 0.9884193365741426 1.0 12.548865739890566 ITVQAS(ph)PNLDK ddPTM_A549_PD325901_60min_R1 2 ITVQASPNLDK 11 0 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 ITVQAS(1)PNLDK;IT(0.012)VQAS(0.988)PNLDK 180.11 3.4260000000000004e-16 43339000.0 14983.2 15154.6 16678.2 13767.7 16975.6 15085.1 15961.0 15247.0 16041.5 15707.3 16298.5 True False 16504.283433951143 16431.731327073325 17810.08294616397 14618.099560284672 15783.29241864075 14962.251947048959 16568.40458919434 14942.886623959894 15367.331540818916 14715.538397375409 14293.88782470404 1.154639216170907 1.149563472764524 1.2459929142149073 1.0226818441250323 1.1041987045233825 1.0467587356597126 1.1591251304322723 1.045403938187775 1.075098092924701 1.0294986624942328 1.0 13.803110751025638 -2.0000000050506954 0.07472747217266872 0.8982615113660929 1.6180151717162494 0.4492628110885295 0.05353572817873804 109.6099447923295 0.5842571054451362 0.9019029166481827 8.21211415693445 0.009999999883703441 2.0000000050506954 0.7197536603501565 ITVQAS(ph)PNLDKR ddPTM_A549_MK2206_60min_R1 2 ITVQASPNLDKR 12 1 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 ITVQAS(1)PNLDKR;IT(0.016)VQAS(0.984)PNLDKR 75.911 0.00050247 53853000.0 3106.0 3932.2999999999997 3626.2 3054.5 3954.8 3384.5 3060.0 3257.4 5060.7 4637.0 4581.7 True False 3630.2168655907635 4132.4372737887015 4140.449686760748 3802.852637121717 3373.0541588918827 3742.6455435507255 3615.962390718434 3719.14642536912 3914.45953027728 3589.498479463634 3443.937441512869 1.0540890847297344 1.1999164746655169 1.2022430015284806 1.104216525910872 0.9794179529028122 1.0867344738720452 1.0499500795606778 1.0799111448828629 1.1366232972448296 1.042265877479709 1.0 11.749843221346072 -10.915270959083163 1.0658117783991634 0.9975778640120654 1.1024924612265634 0.17722434208240723 0.06260371332668727 0.6364583871190179 1.2342010421533922 0.05182353711091221 0.011163554729640028 1.2154274511395426e-11 10.915270959083163 0.10491459721449803 ITVQAS(ph)PNLDKR ddPTM_A549_PD325901_60min_R1 2 ITVQASPNLDKR 12 1 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 ITVQAS(1)PNLDKR;ITVQAS(1)PNLDKR 146.78 2.686e-12 78861000.0 14279.7 14998.2 15521.6 15848.5 17850.7 16623.9 17191.1 17120.7 16503.0 16924.9 18008.9 True False 15729.36463184046 16262.150950187488 16574.989114963162 16827.425850444986 16596.92841357187 16488.520470036485 17845.316717830883 16779.21420757067 15809.436300728412 15856.258925578506 15793.919467822961 0.9959126779065818 1.0296463131471867 1.049453819790045 1.065436979384857 1.0508429175788114 1.0439790137988634 1.1298852545238847 1.0623844348298124 1.0009824561241472 1.0039470543003939 1.0 13.94708161883512 -8.766505455193048 24.792578778089357 1.0004639322628157 1.055062286007343 0.3661901256708501 0.03028513935141116 83.62213738783531 409231.49840510916 0.00536732776472266 0.005798165164597439 1.7119636725130326e-09 8.766505455193048 0.05459835374452737 ITVTSEVPFSK ddPTM_A549_PD325901_60min_R1 1 ITVTSEVPFSK 11 0 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;P35268 K7EJT5 RPL22 60S ribosomal protein L22 0 115.57 5.7487e-05 5165700.0 4811.8 4602.8 5368.6 5149.0 5829.6 5429.7 5511.4 5062.8 5236.0 6079.0 5399.5 False True 5300.290393740064 4990.694109528007 5732.945480014385 5467.0420357725525 5420.149007028215 5385.482323411298 5721.139342953799 4961.818482310236 5015.949128680479 5695.170902551366 4735.3957302506005 1.1192919653748914 1.0539127865590012 1.2106581596531096 1.1545058422146341 1.1446031790760973 1.1372824216163862 1.2081649916618546 1.047814958866733 1.0592460301971491 1.2026810908684022 1.0 12.209269279355537 -8.404960722945992 5.9235695485240285 1.0292219477989368 1.1454386929836287 0.06210000660283965 0.06694530245588264 0.11893611729397031 5.388816788296648 0.00732308709787483 0.008854021848668764 3.935856692457328e-09 8.404960722945992 0.11621674518469183 IVADKDYS(ph)VTANSK ddPTM_A549_PD325901_60min_R1 1 IVADKDYSVTANSK 14 1 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 1 IVADKDY(0.003)S(0.723)VT(0.269)ANS(0.006)K 52.611999999999995 0.008991599999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IVADKDYSVTANSK ddPTM_A549_MK2206_60min_R1 2 IVADKDYSVTANSK 14 1 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 ; 143.14 5.5907e-13 40493000.0 12396.099999999999 13754.2 14377.3 12223.2 18866.9 13815.0 13930.2 13830.4 20556.6 19551.6 18887.7 False True 14488.258624452554 14454.230031061868 16416.21732983986 15217.884548720307 16091.604002831311 15276.894130345187 16461.137024570562 15790.901553823624 15900.56292214475 15134.879980824062 14197.362815999002 1.0204894255520287 1.0180926006042053 1.1562863851968643 1.0718810772076122 1.1334220454447843 1.0760374534578816 1.1594503315799265 1.1122418831213403 1.1199659491850424 1.0660345993108362 1.0 13.793335351137255 -10.780992561856777 1.0179730491269698 0.9997431451026543 1.098898715484753 0.15518246887461673 0.049114977548403244 0.44681148132931947 0.8186443495810684 0.03184615675686155 0.007945660702427478 1.6557983220145067e-11 10.780992561856777 0.09915557038209866 IVADKDYSVTANSK ddPTM_A549_PD325901_60min_R1 2 IVADKDYSVTANSK 14 1 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 ; 179.14 2.573e-23 77152000.0 34163.0 32848.0 36357.0 36758.0 42101.0 39387.0 40589.0 41691.0 40156.0 40510.0 41367.0 False True 37631.20261052865 35616.21624006604 38824.40465240155 39028.45817652503 39143.97100056519 39066.24533071822 42133.636606153035 40859.44029904319 38468.38296625161 37952.191686520164 36279.12124701857 1.037268856494731 0.9817276443263627 1.0701583532868 1.0757828975731434 1.0789669003843927 1.076824465088958 1.1613742328341425 1.1262522049759138 1.0603449489398244 1.0461166197524447 1.0 15.146851890875578 -4.424759040730404 16.30775907384514 1.051211212413535 1.0601079997814875 0.0 0.05037183938753147 0.0 0.0 0.007690923604897573 0.0 3.7604598772187703e-05 4.424759040730404 0.008896787367952408 IVAEEFLK ddPTM_A549_MK2206_60min_R1 2 IVAEEFLK 8 0 F8WCF6;P59998;H7C0A3;P59998-3;R4GN08;P59998-4 F8WCF6 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 0 ; 107.66 0.00027036 1398100.0 1125.0 1351.6 1175.0 1075.3 1698.8 1436.1 1349.2 1387.8 1852.8 2107.9 1636.7 False True 1314.87249639073 1420.390666849634 1341.6326683425855 1338.7485482720517 1448.908770386753 1588.0671487939708 1594.3321756723233 1584.5248999592504 1433.143758313621 1631.7239259998694 1230.2622193779848 1.0687741813737268 1.154543027069284 1.0905257815857412 1.0881814682961792 1.1777235353283586 1.290836314226483 1.2959287463760454 1.2879570509451062 1.1649091841885644 1.326322063945735 1.0 10.264750130533491 -10.295790514280037 0.9560165919330448 1.011337680252395 1.1809941487236644 0.0 0.12244670611039989 0.41913452728604933 0.7479615032471267 0.04094860080221678 0.016555223024245107 5.0606870978202515e-11 10.295790514280037 0.16965646847126936 IVAEEFLK ddPTM_A549_PD325901_60min_R1 2 IVAEEFLK 8 0 F8WCF6;P59998;H7C0A3;P59998-3;R4GN08;P59998-4 F8WCF6 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 0 ; 107.9 0.0049653 3299600.0 4016.3999999999996 3834.1000000000004 3425.1 4127.8 4749.1 4592.7 4689.0 4506.5 5377.3 4767.200000000001 4763.4 False True 4424.141971282592 4157.213062775122 3657.547882799473 4382.764831086023 4415.539599505574 4555.29857390483 4867.442460919251 4416.614322219142 5151.310781064466 4466.198178424561 4177.531997680473 1.0590324559426585 0.9951361390130267 0.8755283944755623 1.049127770539999 1.0569732564483652 1.0904281706122436 1.1651478585015849 1.0572305190412465 1.233099060384139 1.0690996935282282 1.0 12.02843516327007 -6.808355063661264 1.930509532308097 1.111119979412442 0.9794431898136725 0.34393449432645695 0.07077825838478358 0.3368040424447087 2.5516231509364795 0.013892007261027614 0.03172218859590876 1.5546940495336516e-07 6.808355063661264 -0.1316767895987695 IVAHAVEVPAVQS(ph)PR ddPTM_A549_MK2206_60min_R1 4 IVAHAVEVPAVQSPR 15 0 Q96FF9;B5MBX0;H0YCL8 Q96FF9 CDCA5 Sororin 1 IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR 98.06200000000001 4.0148e-06 94637000.0 3159.57 3087.28 3044.2799999999997 2918.56 4951.2 3229.91 2799.45 3235.5099999999998 4771.24 4656.87 4682.65 True False 3692.828171930008 3244.4093651609483 3476.0046804952885 3633.607331019135 4222.88503881498 3571.696932359264 3308.0738283322617 3694.1534508338063 3690.5617581046426 3604.87983266332 3519.818770434609 1.0491529288236725 0.9217546631698725 0.9875521744734855 1.032327960047351 1.1997450193418795 1.0147388730239224 0.9398420896323016 1.0495294478975892 1.0485090281079872 1.0241663187159513 1.0 11.781285433488813 -6.2291076114867 5.8779450798485025 1.0318986022425494 0.9791161004036115 0.10550529150026544 0.06525594454883936 0.3473875388238098 37.098987220052635 0.009147372801247689 0.024116996401571958 5.900548555471114e-07 6.2291076114867 -0.052782501838937845 IVAHAVEVPAVQS(ph)PR ddPTM_A549_PD325901_60min_R1 4 IVAHAVEVPAVQSPR 15 0 Q96FF9;B5MBX0;H0YCL8 Q96FF9 CDCA5 Sororin 1 IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR 131.24 2.4699000000000003e-09 141336400.0 6863.640000000001 7807.08 6703.4800000000005 8227.2 9410.2 8532.980000000001 7781.76 8244.47 9405.66 8745.83 9061.76 True False 7560.431680055291 8465.010030549642 7158.41846409992 8735.37545867313 8749.260015427632 8463.490239980505 8077.899135142464 8080.0275781884075 9010.372819263719 8193.616801227316 7947.220967229499 0.9513302462874581 1.065153475089626 0.9007448633450335 1.099173597247843 1.100920693095782 1.0649622396155651 1.016443253365147 1.0167110756711735 1.1337765561594606 1.031004024553216 1.0 12.956234742831096 -6.282913281205824 24.89039992501107 1.0625294257313078 0.981683902028319 0.3301000544871536 0.05348359383434621 748.2100391450334 867249.2816357741 0.008571316240625978 0.01993484423783871 5.212987923023081e-07 6.282913281205824 -0.08084552370298881 IVAHAVEVPAVQS(ph)PRR ddPTM_A549_MK2206_60min_R1 2 IVAHAVEVPAVQSPRR 16 1 Q96FF9;B5MBX0;H0YCL8 Q96FF9 CDCA5 Sororin 1 IVAHAVEVPAVQS(1)PRR;IVAHAVEVPAVQS(1)PRR 96.666 1.0286e-06 4305900.0 544.0699999999999 840.22 515.87 602.3100000000001 878.28 560.5699999999999 509.46000000000004 462.93 1003.64 897.26 850.9300000000001 True False 635.8957147656037 882.9836091302154 589.0281230790545 749.8759770387237 749.0861754504807 619.8891453237493 602.0222874429453 528.5517451636666 776.3171424837446 694.5683428258661 639.6205965267364 0.9941764199255627 1.3804802627135324 0.9209023697448004 1.1723762197632397 1.1711414227718173 0.969151319844713 0.9412177949116128 0.8263519780848284 1.2137150471690512 1.085906780672021 1.0 9.321072585798342 -7.231430816897181 24.794368066780397 1.0588458991355574 1.1328327158565923 0.09206112776074993 0.14541948734374624 1760.8438079591665 1454886.5144330657 0.02282267094297413 0.03952640119192977 5.869068564235693e-08 7.231430816897181 0.07398681672103491 IVAHAVEVPAVQS(ph)PRRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 IVAHAVEVPAVQSPRRSPR 19 2 Q96FF9;B5MBX0;H0YCL8 Q96FF9 CDCA5 Sororin 2 IVAHAVEVPAVQS(1)PRRS(1)PR;IVAHAVEVPAVQS(1)PRRS(1)PR 54.223 0.0033969 12726600.0 1320.98 1218.28 1241.37 1312.71 1807.9699999999998 1304.36 1270.18 1202.92 1580.9 1931.83 2071.9700000000003 True False 1543.9291291397562 1280.2852483053946 1417.4149323407958 1634.3240089297915 1542.0200080033774 1442.3865094359069 1500.9552645237707 1373.4375937879975 1222.8286741785435 1495.4282612857965 1557.4426655371199 0.9913232527293689 0.8220432614537748 0.9100912436169634 1.0493638354039552 0.9900974476460591 0.9261249491572563 0.9637306706286564 0.8818543527663896 0.7851516471438279 0.9601819022789283 1.0 10.604963338654366 -8.26329481527722 24.45288493248833 0.8944573182205718 0.9483094112758844 0.06591314750489918 0.07355128452957903 278.5522798472568 3671057.289313082 0.015256714059073358 0.018919864042888153 5.453875060384796e-09 8.26329481527722 0.05385209305531258 IVAHAVEVPAVQS(ph)PRRS(ph)PR ddPTM_A549_PD325901_60min_R1 2 IVAHAVEVPAVQSPRRSPR 19 2 Q96FF9;B5MBX0;H0YCL8 Q96FF9 CDCA5 Sororin 2 IVAHAVEVPAVQS(1)PRRS(1)PR;IVAHAVEVPAVQS(1)PRRS(1)PR 55.228 0.0029636999999999997 22784500.0 1946.6999999999998 1681.4 1941.8799999999999 2181.79 2375.6 2061.24 2095.8199999999997 2156.1400000000003 2388.9 2258.58 2930.2 True False 2144.3275509152036 1823.0974788738145 2073.667654273055 2316.5542130953963 2208.746051375091 2044.4539448419432 2175.5775769767097 2113.1340962408917 2288.5028406235274 2115.972873348325 2569.8039760682123 0.8344323422660488 0.7094305619618291 0.8069361218149241 0.9014517195353215 0.8594998186416001 0.7955680526146387 0.8465928130072135 0.8222938854168856 0.8905359560245236 0.8233985522062088 1.0 11.327442599902225 -10.826361356140175 0.1906416000523933 1.1442651879277324 0.7657946231276962 0.0 0.0702992893886412 3.7732946158429725 0.1977564770049135 0.3624097648429742 0.07302317521248299 1.4915528417184864e-11 10.826361356140175 -0.37847056480003616 IVALNAHTFLR ddPTM_A549_PD325901_60min_R1 1 IVALNAHTFLR 11 0 M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087;A6NHQ2 M0R0P1;A6NHQ2 FBL;FBLL1 rRNA 2-O-methyltransferase fibrillarin;rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 0 55.806000000000004 0.017567 1323100.0 321.34 302.44 297.79 201.75 286.21 314.34 381.65 373.53 517.0 366.41 379.7 False True 353.96220024199476 327.9276802132722 317.99982015674146 214.2116392925057 266.1075969708977 311.7801192590948 396.1738995968933 366.0796511213839 495.2722879159293 343.2748100680782 332.99930711661347 1.0629517619928268 0.9847698574893273 0.954956401892394 0.6432795345651895 0.7991235755866277 0.936278582555465 1.1897138856753136 1.0993405790877095 1.4873072626018686 1.0308574304266234 1.0 8.379375365208002 -7.7534803951648 3.1915376762376435 1.2240103787962708 0.8820619868514312 0.37901138383642474 0.16096073012511034 0.19868327173693284 4.212709473847668 0.03210590781564958 0.04728299872153908 1.764085396671451e-08 7.7534803951648 -0.3419483919448396 IVDS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 IVDSPEK 7 0 E9PQC4;Q9BZD4 E9PQC4 NUF2 Kinetochore protein Nuf2 1 IVDS(1)PEK;IVDS(1)PEK 70.908 0.020912 14431500.0 6600.299999999999 6780.6 6586.0 5688.4 8642.099999999999 7629.2 6425.5 7823.1 10292.7 8714.8 9704.2 True False 7714.269278157983 7125.70357771576 7519.993832939799 7082.058255361979 7370.85853812064 8436.516880146908 7592.930176980811 8932.048382238952 7961.419884064444 6746.120627308535 7294.379317705045 1.0575634940499699 0.976875929720316 1.0309299126640068 0.9708925114673271 1.0104846782823542 1.1565777583940071 1.0409288914481207 1.2245110917880193 1.0914458293580027 0.9248381984926715 1.0 12.832569508402898 -7.0444744528915075 24.993361671770938 1.0668916152673873 1.0061229332498043 0.1441161249131403 0.07638194983957598 673.7904797529609 378649.40596895525 0.01045186357584024 0.01810390091185371 9.026628044991787e-08 7.0444744528915075 -0.06076868201758301 IVDS(ph)PEK ddPTM_A549_PD325901_60min_R1 1 IVDSPEK 7 0 E9PQC4;Q9BZD4 E9PQC4 NUF2 Kinetochore protein Nuf2 1 IVDS(1)PEK 70.363 0.021322 7484200.0 4548.8 4434.6 4200.9 4375.5 5059.9 4489.4 4404.6 4769.8 4412.7 4852.8 5121.8 True False 5010.590827350429 4808.319305230051 4485.998336063853 4645.764697518504 4704.510079707369 4452.839814855824 4572.219463289601 4674.662597164288 4227.249564577605 4546.393379815973 4491.851069765262 1.1154846297280012 1.070453857563298 0.9986970330025401 1.0342650781076066 1.047343290469606 0.9913151049971307 1.0178920432303065 1.0406984836673536 0.9410929923815385 1.012142501878087 1.0 12.133094379704033 -2.000000000836602 0.29458914841103734 0.9756028710692443 2.0840223416554635 0.4862315262675315 0.031161160815362816 25.013389843032712 0.3125339941421638 0.011925452360493943 14.768291737378016 0.00999999998073653 2.000000000836602 1.1084194705862194 IVDS(ph)PEKLK ddPTM_A549_MK2206_60min_R1 4 IVDSPEKLK 9 1 E9PQC4;Q9BZD4 E9PQC4 NUF2 Kinetochore protein Nuf2 1 IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK 109.42 0.00033537 185199900.0 9222.1 11803.599999999999 10614.2 9309.7 12232.3 9619.3 9015.7 8655.6 13236.1 13448.1 16333.2 True False 10778.565021302184 12404.352822748091 12119.453164529252 11590.576917928309 10432.94487402983 10637.207941225442 10653.73598888895 9882.557806663277 10238.144483708396 10410.164869888926 12277.215666612396 0.8779323678913813 1.010355536596253 0.9871499771310384 0.9440721115169961 0.8497810217997541 0.8664185944173877 0.8677648318797183 0.8049510634189366 0.8339142002327771 0.8479255518984755 1.0 13.58369579046644 -6.539238749020342 22.05269461168955 0.8983368204219632 0.9639909546552824 0.24238042348394973 0.06041602141025927 94.77340150610317 127750.5282015353 0.011184504406128932 0.023292508070529926 2.8890911969161706e-07 6.539238749020342 0.06565413423331923 IVDS(ph)PEKLK ddPTM_A549_PD325901_60min_R1 4 IVDSPEKLK 9 1 E9PQC4;Q9BZD4 E9PQC4 NUF2 Kinetochore protein Nuf2 1 IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK 119.27 0.00012853 265148700.0 13457.2 13826.4 13760.800000000001 15957.300000000001 17754.4 16699.4 15928.7 16083.300000000001 16970.9 17070.3 16711.0 True False 14823.365037332958 14991.599251755024 14694.690638412609 16942.946179342256 16507.39219335491 16563.405623068425 16534.875395019095 15762.505964395234 16257.672090894486 15992.47834476437 14655.652939756978 1.011443509085905 1.022922643800244 1.0026636615110973 1.1560690096161084 1.1263498297352992 1.1301717972684937 1.1282250925964734 1.0755239653387023 1.109310663791147 1.091215683839028 1.0 13.839169624067194 IVEGQGQSSEVIT(ph)PPEEISR ddPTM_A549_MK2206_60min_R1 2 IVEGQGQSSEVITPPEEISR 20 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 IVEGQGQSSEVIT(0.997)PPEEIS(0.003)R;IVEGQGQSS(0.001)EVIT(0.995)PPEEIS(0.004)R 104.03 1.4931e-09 8034100.0 1599.91 1688.93 1735.64 1296.08 2788.0 1978.83 1686.6399999999999 2216.1 3315.7 2971.7 2648.2 True False 1869.935693955995 1774.8893229967077 1981.779850623084 1613.6196581832423 2377.888893241267 2188.228477158954 1993.0806557782146 2530.238961521615 2564.699244084883 2300.390906064714 1990.5788533981665 0.9393929262152974 0.8916448197803117 0.9955796763539101 0.8106283533699719 1.1945715635338503 1.0992925366525295 1.0012568215400144 1.2711071240419243 1.288418813304794 1.155639176080696 1.0 10.958972307135424 -6.769059773008949 24.997112867651417 1.1396515311662079 0.9142115526872792 0.5803945583918593 0.0960408390481625 123.8310023133476 406203.0590158146 0.01786786337079042 0.03422780804224591 1.7019242522882373e-07 6.769059773008949 -0.22543997847892872 IVEGQGQSSEVIT(ph)PPEEISR ddPTM_A549_PD325901_60min_R1 2 IVEGQGQSSEVITPPEEISR 20 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 IVEGQGQSSEVIT(0.999)PPEEIS(0.001)R;IVEGQGQSSEVIT(0.906)PPEEIS(0.094)R 160.13 7.112000000000001e-27 10499300.0 1867.26 2837.6 3327.3 3301.8 3868.8999999999996 3678.5 3438.4 3049.7 2997.8 3209.1 3754.5 True False 2056.8228605958398 3076.734510558066 3553.1105866802973 3505.7446870681324 3597.161810980422 3648.5435156027893 3569.2501935646737 2988.8713410566306 2871.8128911303174 3006.4768783315685 3292.720301736436 0.624657630200525 0.934405059833212 1.0790805963101522 1.0646955604517507 1.0924589644262943 1.1080636012960796 1.0839821990596674 0.9077209927245965 0.872170311464308 0.9130677989096386 1.0 11.685064252885763 -5.276515629998524 3.984606168235507 0.98332935262103 0.5971019941981791 0.626606804883238 0.08362702220539117 0.13686986719591815 4.46561289058633 0.013904534902132401 0.14846901230660842 5.290349572154263e-06 5.276515629998524 -0.38622735842285094 IVEMST(ph)SK ddPTM_A549_PD325901_60min_R1 1 IVEMSTSK 8 0 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 1 IVEMS(0.297)T(0.624)S(0.078)K 96.331 0.01963 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 IVEMSTSK ddPTM_A549_MK2206_60min_R1 2 IVEMSTSK 8 0 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 0 ; 111.95 0.0040909 9555900.0 7130.4 7515.299999999999 8460.8 7782.0 10231.6 8076.1 6745.4 7281.9 11558.1 11288.1 10686.2 False True 8333.837198457295 7897.796669558334 9660.668664096118 9688.590349347254 8726.545193718563 8930.707541518692 7970.951866128137 8314.131624883466 8940.208804493022 8738.110370074075 8032.521615883803 1.0375119541511921 0.9832275650451958 1.2026943874004343 1.2061704670907676 1.086401706839154 1.111818675203909 0.9923349412924186 1.0350587303049141 1.1130015245541731 1.087841500830202 1.0 12.971637242722473 -7.711852750560749 24.993579000585292 1.0488923715391343 1.1073622842146682 0.15551780235653567 0.06809523693624273 186.6176489982919 94061.93128422335 0.011625872767584176 0.017243941094810197 1.941544054991812e-08 7.711852750560749 0.05846991267553392 IVEMSTSK ddPTM_A549_PD325901_60min_R1 4 IVEMSTSK 8 0 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 0 ;;; 164.53 0.00029835 22766900.0 14115.5 13420.9 12792.2 14364.7 16514.0 14950.8 15427.2 15143.099999999999 16333.7 15834.900000000001 14808.599999999999 False True 15548.495168718111 14551.926343652653 13660.355617747642 15251.974894399296 15354.113610207201 14829.045641721943 16014.290538087771 14841.058990967862 15647.2513909718 14835.081711599054 12987.236079449774 1.197213562115893 1.1204790807398004 1.051829314118881 1.1743818931984389 1.182246439217551 1.141816900147564 1.2330791894533917 1.1427419121495348 1.204817660605329 1.1422816695442382 1.0 13.664806811201535 -10.845312180826841 1.0393879219624038 0.9980169093481822 1.1615159760745084 0.10674427453689606 0.06154260310852844 0.29137643670335656 0.5476092125752694 0.035491906558620445 0.008265752954228812 1.427867205856923e-11 10.845312180826841 0.1634990667263262 IVENIQVFDFK ddPTM_A549_MK2206_60min_R1 2 IVENIQVFDFK 11 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 166.14 1.2686e-13 116182000.0 15592.599999999999 17358.0 17448.699999999997 16336.400000000001 25742.0 19690.1 18162.4 19076.0 27769.0 22780.0 23454.0 False True 18224.249677530748 18241.448057987527 19923.188034135525 20338.81873336887 21955.385900221187 21773.693312769432 21462.272982086422 21780.081417799876 21479.365837980866 17633.9821786029 17629.72450253025 1.033722885171301 1.0346984183087762 1.130090718733359 1.153666282785633 1.2453618261062507 1.2350557894222585 1.2173912858936689 1.2354181379677236 1.2183608334264162 1.0002415055364045 1.0 14.105722309571192 -5.790585273444872 4.357334339656983 1.144948783274317 1.032010655838226 0.23262163748263254 0.08478928250726003 0.2868913646336217 12.198349725504833 0.01454230422698017 0.05300349234271753 1.6196259501572106e-06 5.790585273444872 -0.112938127436091 IVENIQVFDFK ddPTM_A549_PD325901_60min_R1 2 IVENIQVFDFK 11 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 206.11 2.0821999999999997e-32 51394000.0 34102.0 35281.0 38125.0 37666.0 50223.0 46975.0 45327.0 49160.0 45476.0 47027.0 45107.0 False True 37564.00993543448 38254.25368868026 40712.3917642492 39992.5432743074 46695.5097399441 46592.4511745116 47051.943788886114 48179.46523472604 43564.80186704991 44057.70719432195 39559.124956831925 0.9495662499214891 0.9670146579436331 1.029152990837784 1.010956215991846 1.1803979433543994 1.1777927652685607 1.1894081034459325 1.2179102871284662 1.1012579756147056 1.1137179409908335 1.0 15.27172289375564 -6.138717390329559 1.7556296156665028 1.0892861676298522 0.9587848965767666 0.41368439805271406 0.07132953164521594 0.4344354344405576 2.508457945135767 0.013288799289078874 0.05301239775222755 7.265786121776087e-07 6.138717390329559 -0.13050127105308562 IVEPEVVGES(ph)DS(ph)EVEGDAWR ddPTM_A549_PD325901_60min_R1 1 IVEPEVVGESDSEVEGDAWR 20 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 2 IVEPEVVGES(1)DS(1)EVEGDAWR 79.633 0.0002637 1487000.0 1022.1 1381.6 766.14 895.79 770.89 1141.8 693.33 1155.5 1002.4 825.46 1619.4 True False 1125.862839569749 1498.0322807256225 818.1348675740821 951.1209138133019 716.7453458261256 1132.501559362584 719.7150525547338 1132.4526460277866 960.2726139398991 773.3403147261154 1420.224066222396 0.7927360663338088 1.0547858724223607 0.5760604168257831 0.669697786732452 0.5046706099922467 0.7974104835266487 0.5067616228114473 0.7973760429507137 0.6761416291825658 0.5445199339447162 1.0 10.47190284377692 -10.702607184049665 0.8107465629493908 1.0132456040026907 0.7047310265104216 0.0 0.20064991898138046 0.6430863396854677 0.6992381189870323 0.12627736903091444 0.02787160645647189 1.9833201122420476e-11 10.702607184049665 -0.30851457749226907 IVEPEVVGES(ph)DSEVEGDAWR ddPTM_A549_MK2206_60min_R1 2 IVEPEVVGESDSEVEGDAWR 20 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 IVEPEVVGES(0.984)DS(0.016)EVEGDAWR;IVEPEVVGES(0.871)DS(0.129)EVEGDAWR 84.14 8.8071e-05 8267700.0 939.21 982.17 959.52 1100.7199999999998 1832.15 1131.05 1339.3899999999999 1186.25 2190.76 1850.3000000000002 1503.8600000000001 True False 1097.7256865201225 1032.1582578127432 1095.5943641941074 1370.396449413198 1562.6431620344295 1250.7369602697736 1582.73982565502 1354.4045702382634 1694.5563579248437 1432.3159449108396 1130.4100575754728 0.9710862701226735 0.9130830453035227 0.9692008283648512 1.2123002977808364 1.382368417161839 1.1064453574947666 1.4001466238275635 1.1981533260091641 1.4990634120501047 1.2670764341772585 1.0 10.142630491566276 -6.269797833088253 4.150770100502671 1.2504847268180195 0.9423351314770947 0.5212396763226548 0.13144444363954214 0.1819896322793377 7.641818776603395 0.02588994850609225 0.06715816667105375 5.372818463668885e-07 6.269797833088253 -0.3081495953409248 IVEPEVVGES(ph)DSEVEGDAWR ddPTM_A549_PD325901_60min_R1 2 IVEPEVVGESDSEVEGDAWR 20 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 IVEPEVVGES(0.999)DS(0.001)EVEGDAWR;IVEPEVVGES(0.991)DS(0.009)EVEGDAWR 158.45 8.246700000000002e-27 19470900.0 2736.8 2738.2 2272.3 2361.06 2490.9 2405.5 2347.0 2607.1000000000004 2732.9 2598.6 3469.3 True False 3014.6379212743263 2968.9577237137373 2426.511942449926 2506.897313843686 2315.947777138496 2385.9104055409825 2436.3163693276806 2555.0993452696152 2618.0457169157535 2434.52395252015 3042.5980937046775 0.9908104285977821 0.9757968789426028 0.7975131344065878 0.823933111320424 0.7611743995798638 0.7841687702616977 0.8007355208591529 0.8397755032307004 0.8604638655143613 0.8001464135395765 1.0 11.571088061001241 -10.307955541541189 0.7721946509254808 0.9973388847333478 0.8433740122000263 0.0 0.09072531965636546 0.5412787900201808 0.6055300590027628 0.04581485423621986 0.015265291548227302 4.920899080441264e-11 10.307955541541189 -0.15396487253332147 IVEYS(ph)PPSAPR ddPTM_A549_MK2206_60min_R1 2 IVEYSPPSAPR 11 0 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 IVEY(0.001)S(0.939)PPS(0.059)APR;IVEYS(0.92)PPS(0.08)APR 95.094 0.00028575 25307000.0 3066.2 3958.8 3289.4 3244.3 4413.5 3619.2 2877.9 3622.6000000000004 5209.5 4912.5 5744.7 True False 3583.69959860734 4160.28601059805 3755.8863823371053 4039.1536456421636 3764.279996528095 4002.1813417694743 3400.7771778590127 4136.114643747217 4029.5565678620537 3802.762838120577 4318.132444345765 0.8299188699734988 0.9634456710668052 0.869794160032105 0.9353936447528605 0.8717379665964406 0.9268315396416331 0.7875574039680157 0.9578480273719058 0.9331711381707206 0.8806498844425159 1.0 12.07619177857148 -9.534137901229935 0.6724024453645051 0.9928303600355824 0.8914454741661387 0.0 0.060360651379916946 0.45315692863123064 0.4466328117405338 0.019161197267367508 0.011257035678087023 2.923224021135923e-10 9.534137901229935 -0.10138488586944372 IVEYS(ph)PPSAPR ddPTM_A549_PD325901_60min_R1 1 IVEYSPPSAPR 11 0 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 IVEYS(0.99)PPS(0.01)APR 91.31299999999999 0.00029654 23968000.0 1487.5 1575.8 1637.1 1255.4 1892.5 2159.8 1467.4 1558.4 1662.4 1594.8 1494.4 True False 1638.5099049603766 1708.5981962705816 1748.2034506820291 1332.9432067797363 1759.5773287705674 2142.2113048794076 1523.2427099920903 1527.3164894588506 1592.5351091517246 1494.1040558297293 1310.5982737821096 1.250199956567914 1.3036780457065065 1.3338972632987556 1.0170494143359001 1.3425756495869625 1.6345293197262032 1.1622498979770008 1.1653582337258372 1.215120713196123 1.1400168043240748 1.0 10.356009821298574 -10.033415395273751 0.4989303944665853 0.9847551385879413 1.291535751743976 0.21466697655776323 0.14832986647680302 0.9403573032697227 0.4422351293779044 0.12888674377417567 0.04028048858392009 9.25943750266268e-11 10.033415395273751 0.3067806131560348 IVLAT(ph)PR ddPTM_A549_MK2206_60min_R1 2 IVLATPR 7 0 Q6P0N0;G5E9K5;Q6P0N0-2;H7C1S6 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 IVLAT(1)PR;IVLAT(1)PR 63.565 0.028011 6613900.0 962.6199999999999 1387.3 1139.03 960.75 1618.2399999999998 1580.79 1013.3199999999999 1399.6 1556.0900000000001 1672.27 1794.03 True False 1125.0867222005734 1457.9076443626045 1300.5615814657478 1196.1337931297062 1380.1990396695644 1748.0681485565233 1197.4271273734646 1597.9975860952347 1203.6380995651145 1294.5030455580443 1348.5228382908826 0.8343104693922039 1.081114537303911 0.9644342272423648 0.8869955770609608 1.02348955499992 1.2962836808696723 0.8879546518404414 1.184998533744179 0.8925604115764216 0.959941506959346 1.0 10.397164239613424 -4.412009364558415 15.486969427449903 0.9833838406321672 1.0021301298353376 0.0 0.13476190189110135 0.0 0.0 0.016802283227765537 0.0 3.872492946940865e-05 4.412009364558415 0.01874628920317034 IVLAT(ph)PR ddPTM_A549_PD325901_60min_R1 2 IVLATPR 7 0 Q6P0N0;G5E9K5;Q6P0N0-2;H7C1S6 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 IVLAT(1)PR;IVLAT(1)PR 67.169 0.02514 14686400.0 1863.72 1896.53 2319.6000000000004 1883.85 2428.3 1934.9499999999998 2139.81 2276.4 1874.27 2103.47 2969.0 True False 2052.9234824018517 2056.3572389726137 2477.0220048879332 2000.211135966229 2257.7445851802204 1919.1924087306274 2221.2416404989617 2230.9954161987457 1795.5009498494956 1970.6565452195646 2603.831822041679 0.7884239930642459 0.7897427251504333 0.9512987681922124 0.7681798490341255 0.8670854108426673 0.7370646569738049 0.8530664775259078 0.8568124090477586 0.6895610287309697 0.7568294267462949 1.0 11.34642055446293 -11.048009551694534 1.3572761375647435 0.999739264185598 0.8006822882239175 0.0 0.09782918275656877 0.2867314603881839 0.9438910280487305 0.05175130942434197 0.011611283941245698 8.953450734810856e-12 11.048009551694534 -0.19905697596168048 IVNHWAS(ph)PELR ddPTM_A549_MK2206_60min_R1 2 IVNHWASPELR 11 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 IVNHWAS(1)PELR;IVNHWAS(1)PELR 142.1 9.1936e-12 40020000.0 1266.95 1537.14 1139.71 793.1500000000001 1737.69 1410.09 1695.97 1572.35 2282.98 2326.42 2114.08 True False 1480.7801860464322 1615.3738603442184 1301.338015690831 987.4717856058567 1482.0781029040245 1559.3047878580132 2004.1057960087376 1795.2354276199235 1765.888675169922 1800.8801062311384 1589.095590360244 0.9318383330928148 1.0165366200393378 0.8189173914929945 0.6214048994887711 0.9326550975879564 0.9812529827135967 1.2611612593767325 1.1297214834086526 1.1112539018307888 1.1332736162353099 1.0 10.633990195749243 -7.301605965030547 3.121262061966874 1.0756466839422254 0.853045437763835 0.5252704866054121 0.11392858224290518 0.19361394677463073 3.806954864513825 0.018454440331530344 0.03148404353909469 4.9933733028080313e-08 7.301605965030547 -0.2226012461783904 IVNHWAS(ph)PELR ddPTM_A549_PD325901_60min_R1 3 IVNHWASPELR 11 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR 171.36 1.2825999999999998e-15 74348900.0 2848.5800000000004 2574.8799999999997 2667.15 2298.7999999999997 2619.9700000000003 3265.95 2498.4900000000002 2098.5099999999998 3424.66 3037.5099999999998 3690.86 True False 3137.7657445862387 2791.8741741421472 2848.1588378758615 2440.7916550464056 2435.952345605825 3239.3531860222715 2593.571404176187 2056.6535718007513 3280.7334497759516 2845.7211002152985 3236.9076182892372 0.9693714231623958 0.8625127755785944 0.8799011815422658 0.7540504527393361 0.7525554117893759 1.0007555259591643 0.8012497451338866 0.6353760484791744 1.013539413741402 0.8791480745809213 1.0 11.660400476116537 IVNVS(ph)LADLR ddPTM_A549_MK2206_60min_R1 2 IVNVSLADLR 10 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 IVNVS(1)LADLR;IVNVS(1)LADLR 63.623999999999995 0.0064498 4011800.0 964.03 769.51 747.87 778.81 928.43 729.68 929.9000000000001 790.46 1339.4099999999999 995.26 1365.77 True False 1126.734695729383 808.6747721570447 853.9292116369093 969.6184849621092 791.8591768837845 806.8942532776161 1098.8507931794343 902.510125682224 1036.035773598255 770.43007476191 1026.6116156655896 1.0975277101251966 0.7877124706335525 0.8317938338183286 0.9444842335370132 0.7713327657708152 0.7859781059991975 1.0703666083760501 0.8791154433773808 1.0091798668443424 0.7504591444374142 1.0 10.003674773884807 -7.762599566417715 24.999851026356637 0.9975636173521195 0.8632641224376941 0.0 0.12177880535557899 27.017407062240956 582181.2441291164 0.01385206446277477 0.01972956988179245 1.727429904269775e-08 7.762599566417715 -0.1342994949144254 IVNVS(ph)LADLR ddPTM_A549_PD325901_60min_R1 2 IVNVSLADLR 10 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 IVNVS(1)LADLR;IVNVS(1)LADLR 83.182 0.00099426 6091200.0 847.05 1205.4499999999998 1135.99 1230.1100000000001 1251.83 971.64 930.69 1372.5700000000002 1288.2 1039.12 1392.98 True False 933.0418924347473 1307.0375020271424 1213.085112662806 1306.0911009174933 1163.9057793790541 963.7272859862157 966.1079172431099 1345.1930145896652 1234.0614338361713 973.5097858626709 1221.652290827759 0.7637540562401295 1.0698932190775237 0.9929872204805934 1.0691185296534096 0.9527308122922789 0.7888720000133751 0.7908206979160174 1.10112592976697 1.0101576717872842 0.7968795975514822 1.0 10.25461800543219 -8.28524411341978 24.99664322972504 1.0121553902652707 0.929158872404004 0.018038306700939977 0.12233053344050586 1291.9015284195027 1356583.530927776 0.017352348416175063 0.020984075594257138 5.185085075596534e-09 8.28524411341978 -0.08299651786126672 IVPEEPS(ph)DSEKDLSGK ddPTM_A549_MK2206_60min_R1 2 IVPEEPSDSEKDLSGK 16 1 Q5SWA1 Q5SWA1 PPP1R15B Protein phosphatase 1 regulatory subunit 15B 1 IVPEEPS(0.958)DS(0.032)EKDLS(0.01)GK;IVPEEPS(0.944)DS(0.043)EKDLS(0.013)GK 49.865 0.006141300000000001 4615500.0 2307.9 3119.7 2694.9 2507.9 3448.6 2461.6 2653.4 2399.4 4303.9 4419.3 4155.1 True False 2697.417097262371 3278.479404683929 3077.0773429076 3122.3356125839096 2941.315508332796 2722.0848781221657 3135.4884338340803 2739.5222978543216 3329.073521916016 3420.977060662851 3123.2739950739096 0.8636504839206522 1.0496931776894414 0.9852089018641426 0.9996995516590987 0.9417411065990041 0.8715485360603945 1.0039107804116563 0.8771315940180564 1.0658922422966084 1.0953176269704434 1.0 11.608843422702934 -8.78303617011804 24.998663124504912 1.03111578084511 0.954318458586039 0.34493420080443626 0.06183293992359323 231.9926529177949 268534.3741160227 0.010110716906319246 0.010768223111642569 1.6480251304081691e-09 8.78303617011804 -0.07679732225907088 IVPNIDAGS(ph)IISDTER ddPTM_A549_PD325901_60min_R1 1 IVPNIDAGSIISDTER 16 0 Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9 Q5T321 NBEA Neurobeachin 1 IVPNIDAGS(0.471)IIS(0.471)DT(0.058)ER 54.501000000000005 0.013862000000000001 959230.0 1145.6 1062.5 862.13 1293.7 1280.4 1068.0 1149.3 1094.7 1253.3 1303.0 1234.4 True False 1261.9004686538544 1152.040603844074 920.6393262088436 1373.608910794125 1190.4691211402035 1059.302562094272 1193.0372404210916 1072.865349724463 1200.6281594681511 1220.7283576286288 1082.5766255063143 1.1656454046046594 1.064165414901021 0.8504149309322714 1.2688329661207092 1.0996626872332742 0.9785012322789094 1.1020349158777705 0.9910294795277799 1.1090468158839333 1.1276138139946463 1.0 10.080253428159647 IVPNIDAGSIISDTERS(ph)DDGKESGK ddPTM_A549_MK2206_60min_R1 2 IVPNIDAGSIISDTERSDDGKESGK 25 2 Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9 Q5T321 NBEA Neurobeachin 1 IVPNIDAGSIIS(0.025)DT(0.225)ERS(0.749)DDGKES(0.001)GK;IVPNIDAGS(0.001)IIS(0.006)DT(0.239)ERS(0.753)DDGKES(0.002)GK 71.44 1.3178e-05 11115500.0 2831.5 3606.4 2709.8 2372.6000000000004 3345.8 3233.6 3326.3 2876.4 3583.1 4183.0 3932.3 True False 3309.3879764714234 3789.9503558201495 3094.0903869572235 2953.8871065100607 2853.6372521544595 3575.777405710041 3930.6456536754004 3284.1385086055566 2771.53357103494 3238.0573947803277 2955.801384041088 1.1196246115653825 1.2822073824996443 1.0467856208684327 0.9993523659805551 0.9654360633166249 1.209748877247408 1.32980709559772 1.1110822690378388 0.9376589327006057 1.0954922114399133 1.0 11.529333615077851 -8.701014422443258 6.313132357520853 0.9706366709207485 1.1350901000236062 0.16740057870791614 0.11209465182211799 0.1856091282186161 14.50162009774195 0.019207349344815265 0.02169604323530191 1.990607232007342e-09 8.701014422443258 0.16445342910285776 IVPNIDAGSIISDTERS(ph)DDGKESGK ddPTM_A549_PD325901_60min_R1 2 IVPNIDAGSIISDTERSDDGKESGK 25 2 Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9 Q5T321 NBEA Neurobeachin 1 IVPNIDAGSIIS(0.008)DT(0.035)ERS(0.947)DDGKES(0.01)GK;IVPNIDAGSIIS(0.013)DT(0.215)ERS(0.773)DDGKESGK 127.67 3.7099e-24 17145100.0 4813.5 4656.1 4329.5 4639.0 5646.1 4372.2 4381.8 4963.9 5573.9 4903.200000000001 6016.700000000001 True False 5302.16297648859 5048.485887584372 4623.325905398478 4925.5404940665885 5249.53741398758 4336.594252798289 4548.551796812966 4864.891120395782 5339.6483667593775 4593.611115214651 5276.684043003764 1.0048285880445331 0.9567534926177824 0.8761801668850046 0.9334537474528632 0.9948553620427252 0.8218408033257328 0.8620095044052881 0.9219599052639946 1.0119325552264393 0.8705488291089205 1.0 12.365415885165184 -8.757222960195548 22.715804925771295 1.0056348218892723 0.9186912308257896 0.0 0.06579418586133377 26.719325002210912 143947.98699021837 0.008937233106919289 0.009946821866230924 1.7489485744516572e-09 8.757222960195548 -0.0869435910634827 IVPQSQVPNPES(ph)PGK ddPTM_A549_MK2206_60min_R1 2 IVPQSQVPNPESPGK 15 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK 145.69 1.2599e-13 11140300.0 2974.8 3598.4 3903.2000000000003 3461.0 5594.1 4390.1 3749.7 4294.4 5471.1 6108.7 6239.8 True False 3476.873513122794 3781.5431899909145 4456.732451978533 4308.945155370194 4771.215300459464 4854.657468087468 4430.971953097029 4903.144351048429 4231.904585551409 4728.740427323596 4690.285450280902 0.7412925183294683 0.8062501163472763 0.9502049500444837 0.9186957171470512 1.0172547814064739 1.0350452055741557 0.9447126406414469 1.0453829309588776 0.9022701561368635 1.0081988564342903 1.0 12.195460012343641 -5.651653226450757 1.9774363864658875 0.9674490843550553 0.7320293735511364 0.7516795287788671 0.04598139577226337 0.16993895412497506 1.1380087302258888 0.00717462571297047 0.054531868723356754 2.23021521094795e-06 5.651653226450757 -0.23541971080391888 IVPQSQVPNPES(ph)PGK ddPTM_A549_PD325901_60min_R1 2 IVPQSQVPNPESPGK 15 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK 150.39 5.474400000000001e-14 19517200.0 7058.6 8120.5 7585.6 8834.9 9889.0 8292.5 8386.2 8287.2 8005.6 9218.1 10384.5 True False 7775.183875733322 8804.843033897225 8100.404431918398 9380.611707486294 9194.430755197956 8224.968629369614 8705.341430104727 8121.9052948173685 7669.152472223922 8636.067592829215 9107.27233276922 0.8537335430013594 0.96679254909466 0.8894435277588029 1.0300133085658987 1.0095702005215248 0.903120970674726 0.9558670381231172 0.8918043732582405 0.8420910446072042 0.9482606072682657 1.0 13.152803310014146 -8.22482584030869 24.254469131455743 0.9208262851714321 0.9470986153977453 0.03313339183477437 0.059757153243960894 1478.557249027615 979463.7653742856 0.011728211133080948 0.015140663270576477 5.959010623801409e-09 8.22482584030869 0.026272330226313256 IVQISGNS(ph)MPR ddPTM_A549_PD325901_60min_R1 3 IVQISGNSMPR 11 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 IVQIS(0.019)GNS(0.981)MPR;IVQIS(0.019)GNS(0.981)MPR;IVQIS(0.092)GNS(0.908)MPR 102.87 0.00022254 13725100.0 9288.0 10075.0 11076.4 9623.0 10357.7 11485.5 9509.400000000001 11817.0 11705.5 10982.599999999999 13189.599999999999 True False 10230.910922535782 10924.05560821558 11828.111111804064 10217.39085458133 9630.210884125185 11391.965896005388 9871.285420743347 11581.30066474283 11213.558541972747 10289.156761697754 11567.362815763197 0.8844635623077205 0.944386009344242 1.0225417236576635 0.883294750697867 0.8325329668921427 0.9848369137761641 0.8533738915227458 1.0012049288330993 0.9694135751229044 0.8894989225786544 1.0 13.497772368775397 -8.294932045173208 24.860838183151348 0.9863264822203139 0.9186108237434736 0.10017276463665536 0.06030254264171543 581.1895377033823 431402.05547254335 0.008487122828543284 0.010260727079442011 5.070700442155491e-09 8.294932045173208 -0.06771565847684036 IVQNSNGYK ddPTM_A549_MK2206_60min_R1 2 IVQNSNGYK 9 0 O60701;O60701-3;E7ER83;E7ETF4;E7EV97 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 113.18 2.7366e-06 3014100.0 1756.7 2283.6 2144.6 1656.6 2439.9 1818.2 1765.1 1680.8 3141.3 3216.1 2787.2 False True 2053.1880128085295 2399.8254859557733 2448.736528108516 2062.4670743675993 2080.9939421159866 2010.6007171765202 2085.7958221755257 1919.0585472341193 2429.800565625312 2489.580776321545 2095.0613171933296 0.9800133275140147 1.1454678993217842 1.1688137755266232 0.9844423442129152 0.9932854590164508 0.9596858577246999 0.9955774587875945 0.9159915900719344 1.159775394488415 1.1883092661253167 1.0 11.032776753272248 -4.940287450775156 18.871692363556573 1.0531671131695783 0.0002704007424636086 0.04645989386626015 0.09221043060476664 105.09618517854513 130610.74201600773 0.012649734778813164 13119.976415140565 1.1473939331662654e-05 4.940287450775156 -1.0528967124271147 IVQNSNGYK ddPTM_A549_PD325901_60min_R1 2 IVQNSNGYK 9 0 O60701;O60701-3;E7ER83;E7ETF4;E7EV97 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 133.57 0.00012994 7782800.0 5174.5 5533.4 5475.8 5227.1 6792.700000000001 6129.4 5948.0 6973.6 6136.3 6397.8 7040.7 False True 5699.811430734429 5999.719037468988 5847.420716660346 5549.966095394581 6315.604185542845 6079.484198596095 6174.354394870491 6834.506077316635 5878.412650558063 5993.8418161446225 6174.738534674581 0.9230854713485968 0.9716555614099671 0.9469908213641495 0.8988179927341771 1.0228132171228344 0.9845735433907719 0.999937788490649 1.106849470457266 0.9520099705513871 0.9707037443749037 1.0 12.592162332660667 -6.767174695778819 24.99993075979357 0.9917319668923922 0.938592565743296 0.36565582379188455 0.042007827293812854 154.68713727133945 674275.1889374843 0.00644508465551377 0.012419235666220777 1.709327596514725e-07 6.767174695778819 -0.05313940114909621 IVRGDQPAASGDS(ph)DDDEPPPLPR ddPTM_A549_MK2206_60min_R1 2 IVRGDQPAASGDSDDDEPPPLPR 23 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 IVRGDQPAAS(0.002)GDS(0.998)DDDEPPPLPR;IVRGDQPAASGDS(1)DDDEPPPLPR 287.27 1.1508999999999997e-140 415420000.0 19755.9 28518.0 26913.0 25230.0 34400.0 26313.0 27249.0 21089.1 44671.0 34467.0 38393.0 True False 23090.21293461835 29969.444389773485 30729.668087748065 31411.35113261775 29339.80556940446 29097.4241948442 32199.790583230908 24078.544507660066 34553.08982492865 26680.880761628887 28858.958507105137 0.8001055522822659 1.0384797629614715 1.0648224910882476 1.088443684649403 1.0166619686632468 1.0082631425413482 1.1157641248662267 0.8343525114300947 1.1973089679040774 0.9245268069899334 1.0 14.816731614799657 -5.254714552351112 3.4837058949878084 1.0664661465056073 0.7653933716595007 0.2468606346083575 0.09740042286817925 0.24944735538594406 5.130083930777258 0.013324904939643825 0.19877960032587016 5.562697551742524e-06 5.254714552351112 -0.3010727748461066 IVRGDQPAASGDS(ph)DDDEPPPLPR ddPTM_A549_PD325901_60min_R1 3 IVRGDQPAASGDSDDDEPPPLPR 23 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 IVRGDQPAASGDS(1)DDDEPPPLPR;IVRGDQPAASGDS(1)DDDEPPPLPR;IVRGDQPAAS(0.01)GDS(0.99)DDDEPPPLPR 334.93 7.936299999999997e-219 647511300.0 32508.8 35110.9 40600.1 45882.0 38807.9 66104.4 53095.1 53725.6 49057.3 51380.0 52223.4 True False 35809.06944428634 38069.81876471426 43355.466934234595 48716.026934417554 36082.16698398694 65566.06768324389 55115.66308525354 52654.00076108212 46995.59228235618 48135.85803143433 45800.25287140834 0.7818530946723401 0.8312141610135095 0.9466206891032266 1.0636628376527903 0.7878158901282378 1.4315656262276826 1.203392113139631 1.1496443242118508 1.0260989696782667 1.050995464295439 1.0 15.483067943271662 -5.846265282301751 1.1832891296158257 1.0568263036456376 0.7532866389923412 0.34397245153439093 0.1494531443229479 0.7118315788305559 1.4651197741758673 0.022953788077529385 0.2047081164902098 1.424737048389887e-06 5.846265282301751 -0.3035396646532964 IVS(ph)LDSANTR ddPTM_A549_PD325901_60min_R1 1 IVSLDSANTR 10 0 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 IVS(0.995)LDS(0.005)ANTR 74.077 0.0016408000000000002 5897800.0 1578.9 1302.9 1279.7 1706.0 1539.9 1275.0 1433.5 1664.4 1587.7 1295.3 1523.9 True False 1739.1887656752538 1412.6999555279472 1366.5481374612377 1811.3757453928868 1431.7427363666036 1264.616822724903 1488.0526269412994 1631.2022363034598 1520.9744903754763 1213.514536942719 1336.4699607980176 1.3013302331440126 1.0570383150882134 1.0225056885268564 1.3553434035369556 1.071286881383924 0.9462366232083431 1.1134201819641127 1.2205304153109846 1.1380536300773192 0.9079998597335619 1.0 10.384211695834724 -10.625137202557854 0.8420023013075731 0.9974469147386394 1.1310468853109659 0.24022606478796527 0.1178176891195282 0.9840725989856456 1.2115981804034137 0.08283151627366775 0.020969083378454968 2.3706246582680453e-11 10.625137202557854 0.13359997057232642 IVS(ph)PGLTIHER ddPTM_A549_MK2206_60min_R1 2 IVSPGLTIHER 11 0 Q9HCH5-13;Q9HCH5;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;A0A0U1RR07 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 IVS(1)PGLTIHER;IVS(1)PGLTIHER 102.73 6.9208e-05 7891900.0 647.47 539.96 601.03 435.11 706.31 558.87 342.28999999999996 609.87 651.13 955.3 882.99 True False 756.7471068783168 567.4416576443681 686.2650916203772 541.7119695328304 602.4127346431994 618.0092524521185 404.4796623264744 696.3209401485435 503.6500946409481 739.4970665153357 663.7192137157499 1.1401615189678806 0.8549423399506791 1.0339689999004353 0.8161764166809681 0.9076319054719936 0.931130574015283 0.6094138213387632 1.04911975690786 0.7588300658366139 1.1141715521166744 1.0 9.37442922855451 -2.5056451802973245 1.1641046027899586 0.8807461234033482 199.96329041232877 0.15209706433939063 0.14133116417595237 1354.6022575037998 2.956876367418649 0.01837501447569343 718744.310792325 0.003121438766064813 2.5056451802973245 199.08254428892542 IVS(ph)PGLTIHER ddPTM_A549_PD325901_60min_R1 2 IVSPGLTIHER 11 0 Q9HCH5-13;Q9HCH5;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;A0A0U1RR07 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 IVS(1)PGLTIHER;IVS(1)PGLTIHER 110.38 2.6019e-05 8980600.0 396.96000000000004 594.5699999999999 612.37 638.1600000000001 810.54 503.32000000000005 500.45 552.04 546.48 871.44 952.19 True False 437.25908697349325 644.6765005435963 653.9291106799554 677.5776938334841 753.6104666111996 499.22112879521404 519.494898606748 541.0291291329978 523.5133460353908 816.4171296791188 835.0766664297294 0.5236155008892085 0.771996783600521 0.7830767365058244 0.8113957928322757 0.9024446459906146 0.5978147263167757 0.6220924610764021 0.6478795910393512 0.6269045311415653 0.9776553010032155 1.0 9.705764843889039 -10.818803684438372 1.0499976426852518 1.0010453558132955 0.701589123142016 0.5284421223922957 0.10542086625153392 0.3532387164896637 0.6874372558982734 0.07817280108445443 0.019097600531791763 1.517736279737465e-11 10.818803684438372 -0.2994562326712794 IVSAQS(ph)LAEDDVE ddPTM_A549_MK2206_60min_R1 2 IVSAQSLAEDDVE 13 0 Q15388 Q15388 TOMM20 Mitochondrial import receptor subunit TOM20 homolog 1 IVS(0.001)AQS(0.999)LAEDDVE;IVSAQS(1)LAEDDVE 113.65 2.142e-05 9182800.0 2171.89 1955.6599999999999 1984.2800000000002 1932.9 2929.3999999999996 2362.3 2348.19 2437.77 3252.2 2694.0 3264.3 True False 2538.45193438761 2055.1947407007633 2265.680741394743 2406.46058677118 2498.489140552714 2612.27701803217 2774.825727536311 2783.331362857519 2515.581892696222 2085.4235289357407 2453.6842199031944 1.0345471164532165 0.8375954509671367 0.923379106005797 0.9807539891445861 1.018260263601193 1.0646345592650193 1.1308813518170593 1.1343478269454454 1.025226421676816 0.8499152058849763 1.0 11.260733876085975 -6.550946691308571 2.4436903373876486 1.035442658312827 0.9231675820946275 0.2191788765866608 0.08283376712231486 0.24979933680456345 2.986316456213529 0.009619873065177082 0.023714138504243757 2.8122460062190137e-07 6.550946691308571 -0.11227507621819943 IVSAQS(ph)LAEDDVE ddPTM_A549_PD325901_60min_R1 2 IVSAQSLAEDDVE 13 0 Q15388 Q15388 TOMM20 Mitochondrial import receptor subunit TOM20 homolog 1 IVS(0.002)AQS(0.998)LAEDDVE;IVS(0.002)AQS(0.998)LAEDDVE 116.51 1.6726e-05 12533100.0 2989.7 2987.6000000000004 3569.2 3841.0 3830.7999999999997 4140.0 3299.3 3403.5 3030.46 4229.7 4341.9 True False 3293.212143099187 3239.375536983113 3811.4273753431694 4078.2498464560836 3561.737823542557 4106.285212612626 3424.856666946237 3335.614522505904 2903.100304908525 3962.6360201548814 3807.873825571827 0.864842768944595 0.8507045362766601 1.000933211008064 1.0710044589893033 0.9353613031040209 1.078366931445263 0.8994144301595727 0.8759782165326856 0.7623940387448545 1.0406426792672978 1.0 11.894769960199332 -7.973955913784461 24.925906554520573 0.8839623576743738 0.9683093697036441 0.022374583027650496 0.09638989619856717 360.34540852565806 344873.5149958695 0.01685234300617286 0.023284487676808213 1.0618033377874754e-08 7.973955913784461 0.08434701202927031 IVSGS(ph)PISTPSPSPLPR ddPTM_A549_PD325901_60min_R1 2 IVSGSPISTPSPSPLPR 17 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 IVSGS(0.996)PIS(0.004)TPSPSPLPR;IVSGS(1)PISTPSPSPLPR 166.9 1.9802e-23 12857000.0 6156.4 5673.9 5346.4 6299.0 6647.1 7111.0 6525.3 6631.1 6528.6 6722.8 7037.2 True False 6781.393195897856 6152.059465553778 5709.238854514938 6688.074923933054 6180.230627250109 7053.090373644533 6773.6238622811725 6498.8375085026855 6254.225645818063 6298.321260679777 6171.669012486258 1.0987940510383867 0.9968226509080758 0.9250721065832028 1.0836736238450289 1.0013872446410412 1.1428173415286889 1.0975351802854407 1.053011348365331 1.013376711091405 1.0205215555042375 1.0 12.591444976698892 -4.398157615022903 16.277810325368634 1.0255653079011322 1.0357877907442496 0.0 0.06087035488695227 0.0 0.0 0.00804273603179203 0.0 3.9979962734740864e-05 4.398157615022903 0.010222482843117442 IVSRPEELREDDVGTGAGLLEIK ddPTM_A549_PD325901_60min_R1 1 IVSRPEELREDDVGTGAGLLEIK 23 2 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 143.98 1.4521000000000001e-27 4497400.0 1012.8 979.59 1194.2 792.88 1085.8 1289.4 1028.6 1266.4 984.49 1371.4 1294.0 False True 1115.618710416046 1062.1434871714039 1275.245593307972 841.8543968388693 1009.5371538066482 1278.899553899207 1067.743935871517 1241.140658528419 943.115308956196 1284.8095699554126 1134.846203341843 0.9830571817844773 0.9359360625639426 1.1237166671154977 0.7418224552012556 0.8895805888355705 1.1269364519466711 0.9408710473077969 1.0936641942084884 0.8310512086826861 1.1321442202229381 1.0 10.148281078468782 -8.781653806848112 24.994982578380757 0.92021865660306 0.9755206300269567 0.0 0.12894676736106447 658.9915349946385 814834.5074643985 0.020416976883049505 0.02174797182338411 1.6532791667134087e-09 8.781653806848112 0.055301973423896644 IVSS(ph)FK ddPTM_A549_PD325901_60min_R1 1 IVSSFK 6 0 E7EQ49;A0A087WTQ2;A0A3B3IT47;Q9Y2I8-3;Q9Y2I8;Q9Y2I8-2;C9JGR9 E7EQ49 WDR37 WD repeat-containing protein 37 1 IVS(0.086)S(0.914)FK 69.19800000000001 0.052422 3169700.0 1761.1 1896.7 1686.9 1388.1 1979.3 1851.8 1654.8 1760.2 1806.7 1702.8 2171.5 True False 1939.8855755467016 2056.5415654692283 1801.3831781537579 1473.8397843961686 1840.2807962143113 1836.7195547623335 1717.7743195413047 1725.091430149814 1730.7706819684909 1595.2849173983334 1904.419266272653 1.0186231624002962 1.0798785760523788 0.9458963212861429 0.7739051008871495 0.9663212449095445 0.9644512567640517 0.9019937730956422 0.9058359473154138 0.9088180909637462 0.8376752670228126 1.0 10.895135413930168 -5.795323168024637 9.731897002189944 0.9373959334728169 1.0491853357364924 0.34656831270292987 0.0654864741788157 0.27951043656791075 77.78557628721194 0.00883435095891183 0.027830709660601003 1.6020528244844654e-06 5.795323168024637 0.11178940226367551 IVT(ph)DSDSKTEELR ddPTM_A549_MK2206_60min_R1 2 IVTDSDSKTEELR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 IVT(0.988)DS(0.01)DS(0.001)KT(0.001)EELR;IVT(0.997)DS(0.003)DSKTEELR 90.367 7.328800000000001e-05 7203500.0 1383.53 1721.4699999999998 1575.79 1453.9 1531.5900000000001 1256.98 1127.1399999999999 1414.44 2169.1000000000004 2361.5 2149.6 True False 1617.0360399390825 1809.0854700071309 1799.2607169766488 1810.1055652680507 1306.295139885005 1389.9927892842047 1331.9267480635199 1614.9412015408304 1677.8023133409306 1828.0355098670218 1615.7949940581154 1.000768071373863 1.1196256187572167 1.113545173486244 1.120256945914852 0.8084535134028404 0.8602531845906999 0.8243166694794293 0.9994715960128453 1.0383757342427964 1.131353616386605 1.0 10.65802845068655 IVT(ph)PQK ddPTM_A549_PD325901_60min_R1 1 IVTPQK 6 0 E9PEI0;Q69YH5;Q69YH5-2 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 IVT(1)PQK 70.85600000000001 0.053265999999999994 24026000.0 7814.0 7878.9 8177.3 8584.6 10519.0 7547.8 8614.6 9752.8 8059.6 9121.6 9999.2 True False 8607.271527637233 8542.88255400195 8732.260752099546 9114.851244958829 9780.181728579975 7486.333219265116 8942.433317090003 9558.272753076413 7720.883040013974 8545.660619298009 8769.361790151279 0.9815162988604157 0.9741738063078109 0.9957692430829572 1.039397331650242 1.1152672181416818 0.8536919103591882 1.019735931881964 1.0899621867364564 0.8804384201237047 0.9744905984943505 1.0 13.098256135805583 -8.772780832766824 24.999893341061632 0.9435403748895426 1.0068859143892024 0.11427644100016532 0.0696115565332465 331.10950579431614 729860.6030891581 0.012919977927762796 0.013814982279562902 1.6874043611993411e-09 8.772780832766824 0.06334553949965982 IVTDRET(ph)GSSK ddPTM_A549_MK2206_60min_R1 1 IVTDRETGSSK 11 1 P19338;H7BY16 P19338 NCL Nucleolin 1 IVT(0.002)DRET(0.558)GS(0.419)S(0.021)K 43.813 0.024959000000000002 12104000.0 1824.3 1929.1 1802.3 1788.2 2246.4 1687.8 1545.0 1718.6 2570.3 2992.4 2433.7 True False 2132.1972401472076 2027.2829501476976 2057.893240981991 2226.309080275348 1915.957535788087 1866.4018757290344 1825.7065011960706 1962.2168129917636 1988.1311539256799 2316.41476168794 1829.345123297001 1.165552203897087 1.1082014674704772 1.124934390331487 1.2169978490788578 1.0473461302561573 1.0202568405273067 0.9980109701255427 1.0726334730404998 1.086799384439007 1.2662535528086143 1.0 10.837111563520518 -6.8556194346425485 8.603655439743639 1.0395329896139227 1.1484048205361785 0.145712681922478 0.07721330752638256 0.13737655303396043 11.217462933718538 0.006162487976849158 0.011675249341682705 1.394378139167585e-07 6.8556194346425485 0.10887183092225583 IVTDRETGS(ph)SK ddPTM_A549_MK2206_60min_R1 1 IVTDRETGSSK 11 1 P19338;H7BY16 P19338 NCL Nucleolin 1 IVTDRET(0.237)GS(0.73)S(0.033)K 76.759 0.00033514 11916000.0 2705.1 2852.2 3145.4 2867.4 3658.4 2648.9 2431.3 2734.9 3574.1 4885.4 4614.6 True False 3161.6547466547227 2997.3647972688095 3591.4650170253326 3569.9131287224764 3120.2542062531743 2929.2048398024854 2873.0357387430486 3122.58045027998 2764.572056664894 3781.784746942344 3468.667463519064 0.9114897233322943 0.8641257280477085 1.0354019388706945 1.0291886340412395 0.8995541484070617 0.8444755430175258 0.82828226371065 0.9002247932732161 0.7970127104257365 1.0902701935877168 1.0 11.760165822684002 -6.966028589638281 24.48637180439191 0.8907542528936586 0.9593056024047929 0.04943662107080027 0.08978901405786953 257.99058607505566 185956.57465958534 0.012812536955476333 0.024213321940235497 1.0813627627631021e-07 6.966028589638281 0.06855134951113429 IVTDRETGS(ph)SK ddPTM_A549_PD325901_60min_R1 1 IVTDRETGSSK 11 1 P19338;H7BY16 P19338 NCL Nucleolin 1 IVT(0.001)DRET(0.27)GS(0.676)S(0.053)K 53.981 0.0055195 17873000.0 9349.7 8924.7 10863.0 10116.0 10770.0 9996.2 10706.0 12364.0 11419.0 10243.0 11687.0 True False 10298.87466111464 9676.815790237373 11600.228504525621 10740.842344897092 10013.552354482958 9914.794261429548 11113.422688547995 12117.390320629635 10939.099140642169 9596.255231918683 10249.573089997004 1.0048101097172282 0.9441189116141229 1.131776748423481 1.0479307040972798 0.9769726276946706 0.9673372904775731 1.0842815199195037 1.1822336612688302 1.0672736361398412 0.9362590175862133 1.0 13.323276200131815 -7.774580364146829 24.984372882715686 1.0498341917699963 1.014528999346803 0.07436507484245158 0.07258564262155683 592.5649881168565 1126617.0733369796 0.011159832218543839 0.015470767825949071 1.6804269418516775e-08 7.774580364146829 -0.0353051924231933 IVTDSDS(ph)KTEELR ddPTM_A549_MK2206_60min_R1 2 IVTDSDSKTEELR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 IVT(0.005)DS(0.201)DS(0.792)KT(0.002)EELR;IVT(0.026)DS(0.018)DS(0.941)KT(0.015)EELR 100.41 4.2656999999999995e-05 10239900.0 2794.4 2952.2 3399.8 2703.0 3852.3999999999996 2952.2 2984.3 3037.8 4356.7 4454.8 4266.8 True False 3266.026403479339 3102.4543701342745 3881.9427624094646 3365.235121342279 3285.7170632434218 3264.5998444882403 3526.5086805951037 3468.417452872325 3369.91440622029 3448.4575860070304 3207.2358023107413 1.018330613896939 0.9673296761962515 1.2103702383256674 1.0492633933924356 1.0244700626240628 1.0178858199749983 1.0995476784258686 1.0814351256535015 1.050722370894071 1.0752117395055563 1.0 11.647114712129916 -10.249425384671708 0.8196463088689273 1.002082139406459 1.058777246577044 0.0 0.06274946987091863 0.9939002600354832 1.2869185625392914 0.030836943319208148 0.011470448122904217 5.630858518184686e-11 10.249425384671708 0.05669510717058501 IVTDSDS(ph)KTEELR ddPTM_A549_PD325901_60min_R1 2 IVTDSDSKTEELR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 IVTDS(0.022)DS(0.976)KT(0.002)EELR;IVTDS(0.011)DS(0.989)KTEELR 136.01 5.3641000000000005e-09 23967000.0 5701.200000000001 5942.2 6223.799999999999 6937.7 7263.6 6591.5 6879.8 7186.1 6923.0 6121.1 7395.7 True False 6279.98162699839 6442.970048152712 6646.184494749746 7366.225972340111 6753.429794059656 6537.82100940486 7141.614553771012 7042.767598113612 6632.05038538101 5734.612701366536 6486.075785204999 0.9682251387384776 0.9933541114103825 1.024684989020628 1.1356984124580798 1.0412196862491958 1.0079778938627102 1.10106862612696 1.0858287555286432 1.0225058425171325 0.8841421055312705 1.0 12.663130165424766 -2.1652563285788573 12.828605692742501 1.0274861365820254 1.0375490700696284 0.0 0.06544243287762155 0.0 0.0 0.006762352808532734 0.0 0.006835081091669678 2.1652563285788573 0.01006293348760301 IVTVLPGLPT(ph)SPDSASSACGNSSATKPDKDSK ddPTM_A549_PD325901_60min_R1 1 IVTVLPGLPTSPDSASSACGNSSATKPDKDSK 32 2 Q7Z6J0 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 IVTVLPGLPT(0.464)S(0.464)PDS(0.028)AS(0.028)S(0.015)ACGNSSATKPDKDSK 77.27600000000001 5.1572e-06 5048300.0 1095.2 1565.4 1318.8 1611.6 1758.6 1654.3 1513.4 1575.2 1377.5 2032.9 1561.0 True False 1206.3838977563723 1697.3217517717778 1408.3016985886381 1711.1448717908406 1635.082002840644 1640.8279292814163 1570.9932651642562 1543.781400279505 1319.6084653852859 1904.5423470631151 1369.0068959942937 0.8812109721917725 1.2398197238729267 1.028703144381026 1.2499169118852802 1.1943562940587695 1.1985534434358727 1.1475422583779333 1.127665174511977 0.9639165947567193 1.391185356798271 1.0 10.418913998454183 -8.72900609560112 6.750179409332452 0.9829180553223782 1.1425662465836395 0.0 0.1582861577231484 0.1381455959794493 19.2474651943746 0.015510482629336112 0.017417840345088535 1.866353495184556e-09 8.72900609560112 0.15964819126126129 IVVNLTGR ddPTM_A549_PD325901_60min_R1 2 IVVNLTGR 8 0 I3L3P7;P62244;I3L246;H3BN98 I3L3P7 RPS15A 40S ribosomal protein S15a 0 ; 104.06 0.0057936 7495900.0 4338.299999999999 3804.1000000000004 4556.5 4217.5 5320.8 4465.0 4248.2 4694.6 5012.700000000001 4998.700000000001 4621.4 False True 4778.7210223123375 4124.684857490111 4865.73149046037 4478.005396362542 4947.085363763506 4428.63852036603 4409.867575704239 4600.962520157544 4802.033651133812 4683.081228916523 4052.9970974683097 1.1790585848919923 1.017687592242931 1.200526764132087 1.104862719778337 1.2205992861069863 1.0926823814239501 1.0880510076009795 1.1352000530746786 1.1848105329592724 1.155461283661366 1.0 11.984773426869053 -10.909859754687732 1.1176398921732629 0.9986443529298101 1.1373705770728262 0.0 0.0719985752434105 0.3610850752221083 0.788205635011533 0.03949026661767157 0.009009156147223023 1.2306661216812639e-11 10.909859754687732 0.13872622414301605 IVVVTAGVR ddPTM_A549_MK2206_60min_R1 2 IVVVTAGVR 9 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 ; 116.73 0.00052083 7155500.0 3499.3999999999996 4283.8 3997.3 4093.9 6282.6 4851.1 4853.6 4685.299999999999 6324.9 5240.0 4539.5 False True 4090.013167884197 4501.827122410814 4564.177246949628 5096.905683782153 5358.437862509895 5364.4401821004385 5735.436293983982 5349.455623129467 4892.320248789842 4056.2803606619455 3412.2168661736196 1.1986381078031076 1.3193262031610136 1.337598817998866 1.4937226687756526 1.5703684943444767 1.572127561785367 1.6808533920692932 1.5677361178770042 1.4337659183649647 1.188752215860935 1.0 11.736493625870049 -10.359392396114174 0.8304903825679648 1.0119124871768401 1.470238030713548 0.48903519729206646 0.14150059255958308 0.3270464639677292 0.4243273875272419 0.08557007069853612 0.028877463369971997 4.371269713379574e-11 10.359392396114174 0.45832554353670796 IVVVTAGVR ddPTM_A549_PD325901_60min_R1 2 IVVVTAGVR 9 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 ; 146.27 8.4251e-05 11484500.0 5560.5 6206.2 6855.5 6515.9 7730.9 7678.0 7152.9 6912.200000000001 7931.9 6974.5 6974.9 False True 6124.997866576249 6729.218254660792 7320.755455470438 6918.372344317409 7187.908254157135 7615.472913632786 7425.107523717064 6774.330748483998 7598.549826925264 6534.128879724386 6117.031517534017 1.0013023227065934 1.1000790555634685 1.1967823664936228 1.1310015854073021 1.1750647734204946 1.2449621833406608 1.2138416325685988 1.1074539552503335 1.242195631188851 1.0681862372287587 1.0 12.578615994132045 -4.267774512260075 15.926113161458908 1.1329436843678862 1.1448705039463822 0.0 0.0841042392383839 0.0 0.0 0.013419490248801014 0.0 5.3979081170215724e-05 4.267774512260075 0.011926819578496062 IWDLEGK ddPTM_A549_MK2206_60min_R1 2 IWDLEGK 7 0 H0YAF8;H0YAM7;J3KPE3;H0Y8W2;P63244;H0Y9P0;D6RF23;D6RAC2;D6REE5 H0YAF8 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 91.065 0.034486 3826500.0 2202.45 2169.0 1403.15 1457.03 2698.2 1747.1599999999999 1478.72 1354.4 2657.25 2840.9 2322.5 False True 2574.1697152673455 2279.3928354519476 1602.1377690084241 1814.002415408563 2301.2983542839274 1932.0433115290552 1747.3842831382876 1546.390347676042 2055.387117756298 2199.1387169092613 1745.7591522608727 1.474527406563286 1.3056742864558288 0.917731272915597 1.0390908809266792 1.3182221335077036 1.1067066777378383 1.0009309021094406 0.8857982188856721 1.1773600700270919 1.2597033869541696 1.0 10.76963882083076 -7.510962000405695 23.70804985908616 1.0618718283754958 1.1926581672973482 0.1500851644724729 0.164641656258755 485.4752772086736 965840.1321396504 0.02477536637749635 0.03832432863005819 3.0834577326709454e-08 7.510962000405695 0.13078633892185243 IWDLEGK ddPTM_A549_PD325901_60min_R1 2 IWDLEGK 7 0 H0YAF8;H0YAM7;J3KPE3;H0Y8W2;P63244;H0Y9P0;D6RF23;D6RAC2;D6REE5 H0YAF8 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 102.72 0.029310000000000003 6431900.0 4090.2 3507.3999999999996 3287.1 2906.8999999999996 4130.9 4137.5 3643.1 3298.0 4515.3 4288.299999999999 4848.4 False True 4505.434092953903 3802.9809072213707 3510.18237293806 3086.4526109511003 3840.759834831353 4103.805571783754 3781.7401640808152 3232.218802769052 4325.537643378717 4017.536006154144 4252.077536539867 1.0595841807297346 0.8943818344187701 0.8255217226811143 0.7258693155117545 0.9032666506727852 0.9651295246895312 0.8893864544055824 0.7601504852612058 1.0172762858173627 0.9448407211838895 1.0 12.05395218928314 -8.80006128511428 24.997430775066146 1.0081583091733022 0.8757808190171996 0.22474038522063233 0.08820538999306803 134.67788554628177 87167.59430178991 0.015009141426461306 0.015978584494066583 1.5846695573205463e-09 8.80006128511428 -0.13237749015610256 IWHHTFYNELR ddPTM_A549_MK2206_60min_R1 2 IWHHTFYNELR 11 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;Q6S8J3;A5A3E0;P0CG38;P0CG39;Q9BYX7;P68133;P68032;A6NL76 P60709;P68133 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;POTEKP;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1 0 ; 88.681 0.0002988 3699300.0 476.53 409.97 427.21000000000004 382.86 708.35 454.34000000000003 497.41 423.30999999999995 781.29 503.67 489.78 False True 556.9566139600666 430.8357218765494 487.7948019086262 476.6607171872383 604.1526533455714 502.41795723351646 587.7829584206721 483.31548883250485 604.3290624637573 389.8905971859932 368.1541087596685 1.512835523787808 1.1702591703459695 1.324974488406591 1.2947314883789687 1.641031945510523 1.3646946897487857 1.596567699328266 1.3128075372045185 1.6415111174496335 1.0590418194694504 1.0 8.52416599247801 -10.980834287796268 1.243651561413037 0.9992767268481902 1.4421920797755916 0.5159551443936978 0.14852456613021114 0.2928857964633981 0.8036740291352579 0.11006286120711352 0.025133803532885527 1.045118925467759e-11 10.980834287796268 0.44291535292740136 IWHHTFYNELR ddPTM_A549_PD325901_60min_R1 1 IWHHTFYNELR 11 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;Q6S8J3;A5A3E0;P0CG38;P0CG39;Q9BYX7;P68133;P68032;A6NL76 P60709;P68133 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;POTEKP;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1 0 96.34200000000001 0.00027731 1856600.0 411.05 348.05 317.22 306.47 392.22 451.89 324.95 270.42 719.07 393.79 383.59 False True 452.77949340098354 377.381394981581 338.74845679882316 325.3999558561302 364.67182028554384 448.20995766365183 337.31615006946276 265.026260959614 688.8499885332836 368.9260321953781 336.4108617773549 1.345912230683694 1.121787188997903 1.0069486312335996 0.9672694696507391 1.084007271224473 1.3323290315170868 1.0026910198063312 0.787805303192068 2.047644909245474 1.0966531527734755 1.0 8.394080476757045 -8.735863330302758 24.99997026375277 1.4947215030097611 1.0820428438057805 0.14225434839784623 0.29456771801822695 275.5494497820594 269342.8366158552 0.06593999411002341 0.0747557893989517 1.837116381172623e-09 8.735863330302758 -0.4126786592039806 IWS(ph)PTIGR ddPTM_A549_MK2206_60min_R1 2 IWSPTIGR 8 0 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 IWS(0.5)PT(0.5)IGR;IWS(0.977)PT(0.023)IGR 68.37100000000001 0.007569800000000001 8534700.0 1477.33 1503.98 965.72 540.72 1372.03 1522.7399999999998 1046.04 1347.79 1898.1299999999999 1869.12 1527.24 True False 1726.6671867492607 1580.5261579820287 1102.6736174228088 673.1964242738429 1170.2062045171504 1683.8753360869946 1236.091927838924 1538.8433599337648 1468.206585690757 1446.884493839782 1147.9841583202995 1.5040862491305413 1.376783944731967 0.9605303430634549 0.5864161272563607 1.0193574502189695 1.4668106035111121 1.0767499872537802 1.3404743861495094 1.2789432459059353 1.2603697388619244 1.0 10.164887018251964 IWS(ph)PTIGR ddPTM_A549_PD325901_60min_R1 2 IWSPTIGR 8 0 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 IWS(0.5)PT(0.5)IGR;IWS(0.5)PT(0.5)IGR 120.15 0.0012072 10695900.0 2537.1 2355.11 2018.5700000000002 2073.34 2086.08 2180.3900000000003 2225.48 1819.16 2880.99 2737.4 3186.8999999999996 True False 2794.664524285695 2553.5833849592636 2155.56229884749 2201.405502903216 1939.560937385314 2162.6336267460006 2310.171859229384 1782.875426696588 2759.912009212598 2564.560096832393 2794.9315034235856 0.9999044773950404 0.9136479308460017 0.7712397589018138 0.7876420227854086 0.6939565191524352 0.7737698129978976 0.8265575941305158 0.6378959285809676 0.9874703569056733 0.9175752943107891 1.0 11.448597211422141 -8.86657779534062 11.087374388059608 0.9944369259497065 0.7994039903796898 0.3756296760892891 0.09473937469673059 0.23351989935745338 23.06732391685286 0.016120699394920827 0.017151575420506826 1.3596345895929584e-09 8.86657779534062 -0.19503293557001666 IWS(ph)PTIGRR ddPTM_A549_PD325901_60min_R1 1 IWSPTIGRR 9 1 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 IWS(0.951)PT(0.049)IGRR 61.815 0.003121 1198100.0 471.28 382.4 423.24 378.5 453.7 649.29 569.39 492.81 607.05 418.45 554.28 True False 519.1239986620009 414.62619003291667 451.9636115488743 401.87908536413113 421.8336771800297 644.0023975114134 591.0584480321635 482.9805179480337 581.5377995732397 392.0289955868761 486.1070738704145 1.0679210950968139 0.8529523891344295 0.9297614370231483 0.8267295560304133 0.8677793429775954 1.3248159348594262 1.2159017628073576 0.9935681743993418 1.1963162661736226 0.8064663459132924 1.0 8.925130318271743 -7.217080682356102 24.999989064402175 1.1113754905634536 0.9024929897624547 0.28005167411940046 0.14156901276902528 340.4670594364229 191882.86643324394 0.017375714287344052 0.030095563213348817 6.066236218021126e-08 7.217080682356102 -0.2088825008009989 IWSTVPT(ph)DEEDEMEESTNRPR ddPTM_A549_MK2206_60min_R1 1 IWSTVPTDEEDEMEESTNRPR 21 1 Q9GZL7 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 1 IWS(0.012)T(0.047)VPT(0.941)DEEDEMEESTNRPR 66.467 0.00048751 3429300.0 938.19 1124.0 900.71 816.45 1912.5 1329.5 793.39 1165.3 1182.3 1339.0 1635.9 True False 1096.533535456728 1181.2067990078338 1028.444221874766 1016.4802866518337 1631.1737834734306 1470.186807549325 937.5386931934955 1330.4848435815788 914.5109377451396 1036.5189700241126 1229.660881456862 0.8917365364649081 0.9605955729911312 0.8363641044320277 0.8266346453564832 1.3265232781422382 1.1956034624826772 0.7624367883303975 1.081993306971971 0.7437098728079053 0.8429307507904772 1.0 10.264044785513812 -7.785025870954938 24.9989431221781 0.8864105156282842 1.0028406339609068 0.11440919276016004 0.16613206559320845 464.42700125287644 492237.0086814256 0.02844544373411324 0.03931491207806513 1.6404920460542446e-08 7.785025870954938 0.11643011833262262 IWSTVPT(ph)DEEDEMEESTNRPR ddPTM_A549_PD325901_60min_R1 1 IWSTVPTDEEDEMEESTNRPR 21 1 Q9GZL7 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 1 IWS(0.003)T(0.003)VPT(0.993)DEEDEMEESTNRPR 93.96600000000001 6.7843e-07 3579800.0 1893.5 2081.1 1653.0 1845.2 1836.1 2328.3 1800.7 1751.9 2212.9 2091.9 2226.1 True False 2085.726726078974 2256.481600621085 1765.1825202964972 1959.1738132467485 1707.1386702011305 2309.3390967454047 1869.22662388085 1716.9569801610362 2119.899508567043 1959.8170769941134 1952.303812410569 1.0683412657498546 1.1558045352761661 0.9041536000060219 1.0035189199511407 0.8744226484367074 1.1828789566793876 0.9574465879738558 0.8794517376068928 1.0858450898323753 1.0038484095230382 1.0 10.930961863460476 IWTHPGWS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 IWTHPGWSPLK 11 0 O43172-2;O43172 O43172-2 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 1 IWTHPGWS(1)PLK;IWTHPGWS(1)PLK 74.46 0.00043238 4436100.0 2177.3 2211.31 2062.75 1933.72 2184.2 2110.77 1924.08 2060.76 2885.5 2352.2 2838.4 True False 2398.337893156456 2397.6648542931202 2202.7406193234106 2053.1614926032435 2030.7893270809363 2093.580588943564 1997.3019172969762 2019.6565251650552 2764.2324695965463 2203.6816905710357 2489.2947941000675 0.9634607756545387 0.9631904023484397 0.8848853998908344 0.8247964433419002 0.8158090925567172 0.8410336107662322 0.8023565236350574 0.8113368211558902 1.1104480177069083 0.8852634472196825 1.0 11.281521375889977 -8.760001905703634 24.999399619380526 1.0521560124754183 0.86175594924717 0.32431027040183225 0.07693922422515805 18.33871647685714 318932.07347549114 0.0119430786630806 0.01318787400418594 1.7377932032182527e-09 8.760001905703634 -0.19040006322824832 IYAS(ph)EEDD ddPTM_A549_MK2206_60min_R1 2 IYASEEDD 8 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 IYAS(1)EEDD;IYAS(1)EEDD 62.2 0.010473999999999999 7296900.0 486.31 484.73 415.69 351.25 528.21 302.57 393.64 635.31 646.2 636.23 433.72 True False 568.3872388620232 509.4006865507714 474.6410926836842 437.30626576821163 450.5110087155558 334.5877565702891 465.15929264130864 725.3671380552759 499.8367317693557 492.50520111907457 326.01535393695826 1.7434370252756024 1.5625052022834314 1.455885702780323 1.3413670874310224 1.381870526265678 1.0262944751828729 1.426801796369556 2.2249477802065125 1.533169299339225 1.5106810006694056 1.0 8.348796100633193 -10.540384959160862 1.018963962700967 1.021117840764717 1.508316659786483 0.011324818228799272 0.31485274398652563 0.5012623720353295 0.9845719216747795 0.15805723594812554 0.05285807488186668 2.8814762267360517e-11 10.540384959160862 0.487198819021766 IYAS(ph)EEDD ddPTM_A549_PD325901_60min_R1 3 IYASEEDD 8 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 IYAS(1)EEDD;IYAS(1)EEDD;IYAS(1)EEDD 86.01100000000001 0.0010952 115715300.0 1116.65 1227.6 1155.94 1247.3500000000001 1410.49 1143.15 1106.97 1222.5 1411.12 1333.9499999999998 1004.75 True False 1230.0114859657183 1331.054160262574 1234.3890396319007 1324.395976562612 1311.42204832634 1133.840565410174 1149.0963491072264 1198.1162784673033 1351.8155337019862 1249.7241693466692 881.1721196350205 1.3958810753966957 1.5105495630228218 1.4008489512164568 1.5029935094986595 1.4882700202425017 1.2867413075663447 1.3040543652052672 1.3596847332886115 1.5341106505524766 1.4182520548474709 1.0 9.78328003853502 -10.86314738272792 0.9609153602403294 0.9838185849018446 1.4259166958869665 0.0 0.14498295224745145 0.22897963860763343 0.35205518565443594 0.07360205636106336 0.015406088853536627 1.370416620915157e-11 10.86314738272792 0.44209811098512186 IYEFPET(ph)DDEEENKLVK ddPTM_A549_MK2206_60min_R1 2 IYEFPETDDEEENKLVK 17 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 G3V1Q4 SEPT7 Septin-7 1 IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK 125.23 1.0137000000000001e-10 12018400.0 4874.6 5235.5 5580.7 4833.6 6773.7 6356.6 5055.5 5098.8 8111.799999999999 6949.2 7281.700000000001 True False 5697.313307472228 5501.96458737145 6372.127176356992 6017.832216988549 5777.297703066132 7029.251192830413 5974.0189105480495 5821.570514420109 6274.490251882786 5379.370893570993 5473.45292530377 1.040899297979444 1.0052090814439767 1.1641878103854062 1.0994581115639295 1.0555124492544163 1.2842443862692576 1.0914534192721679 1.063601093106509 1.1463495415984708 0.9828112102147009 1.0 12.41823552839062 -4.26358232327326 12.78232850369626 1.0854655154048742 1.099364704956721 0.0 0.08382530230654495 0.0 0.0 0.011021904445373102 0.0 5.4502657265314746e-05 4.26358232327326 0.013899189551846769 IYEFPET(ph)DDEEENKLVK ddPTM_A549_PD325901_60min_R1 2 IYEFPETDDEEENKLVK 17 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 G3V1Q4 SEPT7 Septin-7 1 IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK 149.94 4.6263999999999994e-17 18406000.0 10636.7 11747.099999999999 11413.1 11581.3 14810.099999999999 13531.6 12699.7 14345.5 13521.2 13107.099999999999 14272.7 True False 11716.529953675328 12737.069343451036 12187.66159854565 12296.650597959346 13769.889668071322 13421.403135987686 13182.994033042489 14059.367748672963 12952.95098523958 12279.515469128324 12517.248382099777 0.9360307949493507 1.0175614443878587 0.9736693901492399 0.9823764954240346 1.100073214793986 1.072232708522497 1.0531862619179753 1.123199549892969 1.0348081774715663 0.9810075740518642 1.0 13.61162983464794 -6.574757468723809 24.997875784575804 1.0371054210542596 0.9796157200356976 0.3777274578206673 0.04345698229213086 104.44579695863477 50327.05290965944 0.0065887314413830365 0.013715540410212694 2.662211353755682e-07 6.574757468723809 -0.05748970101856199 IYGADDIELLPEAQHK ddPTM_A549_MK2206_60min_R1 2 IYGADDIELLPEAQHK 16 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 ; 81.311 0.00026863 2127240.0 946.3 1146.21 1150.3899999999999 1112.87 1657.04 1314.71 1016.6099999999999 1078.87 1701.2 1525.4499999999998 1684.08 False True 1106.0123051862643 1204.5471931412528 1313.5326002847876 1385.5231999586324 1413.291611067614 1453.8317395661315 1201.3148777870144 1231.8031264008046 1315.880916258167 1180.849785528963 1265.8764577565084 0.8737126742576691 0.9515519352307503 1.0376467563135974 1.0945169186684867 1.1164530333176168 1.148478376904752 0.9489985143701026 0.9730832095447202 1.039501847273691 0.9328317769822208 1.0 10.30592089758076 -5.520457359740434 2.7671209377557227 1.0324823647268362 0.875820985522523 0.3628239318383165 0.06476453195448396 0.23458833337058282 3.221494322685454 0.008603457762428227 0.06314327697723118 3.0167730539259964e-06 5.520457359740434 -0.15666137920431322 IYGADDIELLPEAQHK ddPTM_A549_PD325901_60min_R1 1 IYGADDIELLPEAQHK 16 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 85.90899999999999 5.5636999999999996e-05 2078000.0 1257.9 1167.0 1086.0 1351.1 1503.3 1384.6 1571.6 1385.1 1494.2 1658.7 1659.8 False True 1385.6010819829635 1265.3471855868568 1159.7024906485153 1434.554378429266 1397.7133941034572 1373.3242766626665 1631.4080980125188 1357.4730939100702 1431.4039702204677 1553.9693989244863 1455.6551223390961 0.9518745619885824 0.8692630322720721 0.796687671998149 0.985504297284426 0.9601954286104993 0.9434406925013035 1.1207380601189414 0.932551311830472 0.9833400427433256 1.0675395394668818 1.0 10.50745287355909 -6.347086030618408 8.831950644627437 0.9909132476263797 0.8724248679335174 0.4530064971685045 0.06145795605306682 0.22211565818539517 21.315491043230292 0.00745743132320789 0.017362159737343747 4.4969076555795343e-07 6.347086030618408 -0.1184883796928623 IYHLPDAES(ph)DEDEDFK ddPTM_A549_MK2206_60min_R1 3 IYHLPDAESDEDEDFK 16 0 Q15019;Q15019-3;Q15019-2;H7C2Y0;B5MCX3 Q15019 SEPT2 Septin-2 1 IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK 211.29 1.073e-46 23483400.0 6286.8 5649.299999999999 6820.0 5389.5 8924.4 7225.400000000001 6598.200000000001 7244.2 9297.5 9588.7 9764.9 True False 7347.858142497102 5936.82523988875 7787.178551571428 6709.92774194385 7611.632582081191 7989.987032167652 7797.007531515801 8271.087534432054 7191.631095056613 7422.606010358628 7340.005832470273 1.0010697961563044 0.808831133842671 1.0609226653639674 0.9141583665044077 1.0370063397510274 1.0885532265958198 1.062261762384966 1.126850267317625 0.9797854741807849 1.0112534212878896 1.0 12.841565494116487 -5.7779506035762065 24.98006122517502 1.0122371059059498 0.9049503926171854 0.29827026609287943 0.06990106250639998 204.38939859156156 309224.83616278466 0.00951435159562591 0.02970188831112136 1.6674368551485534e-06 5.7779506035762065 -0.10728671328876449 IYHLPDAES(ph)DEDEDFK ddPTM_A549_PD325901_60min_R1 4 IYHLPDAESDEDEDFK 16 0 Q15019;Q15019-3;Q15019-2;H7C2Y0;B5MCX3 Q15019 SEPT2 Septin-2 1 IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK 168.09 2.1873e-28 41628600.0 10421.8 10617.800000000001 10322.8 11761.9 12439.9 11254.9 11090.5 10988.400000000001 11986.8 13232.8 14132.7 True False 11479.813463876337 11512.59926917234 11023.367284039126 12488.405849786976 11566.164339325214 11163.243825950203 11512.55504645447 10769.227741766965 11483.03648121985 12397.278749676218 12394.467494566667 0.9262046529154008 0.9288498496784223 0.889378046202583 1.007579055353648 0.9331715416088223 0.9006634476909805 0.9288462817383 0.8688737734386609 0.9264646896894636 1.0002268153198823 1.0 13.597408669574266 -10.432507607307727 0.9001803111694782 0.9976127418243587 0.9239753630182164 0.43794472225368275 0.03318427741416984 0.41891125561847126 0.6389391018526589 0.01849148092710019 0.006217653959888431 3.6939617378337176e-11 10.432507607307727 -0.0736373788061423 IYHLPDAES(ph)DEDEDFKEQTR ddPTM_A549_MK2206_60min_R1 11 IYHLPDAESDEDEDFKEQTR 20 1 Q15019;Q15019-3;Q15019-2;H7C2Y0;B5MCX3 Q15019 SEPT2 Septin-2 1 IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(0.999)DEDEDFKEQT(0.001)R;IYHLPDAES(0.995)DEDEDFKEQT(0.005)R;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(0.996)DEDEDFKEQT(0.004)R;IYHLPDAES(0.998)DEDEDFKEQT(0.002)R 292.19 2.581599999999999e-144 9754710800.0 77385.28000000003 87285.15 79526.94 70781.52 109461.2 84438.17 78706.48000000001 77351.71000000002 124200.4 124452.20000000001 121470.79999999999 True False 90446.02337555158 91727.59130998113 90805.0559296345 88122.99557750297 93359.60248237466 93373.361103879 93006.42862282104 88316.55177217687 96069.20770728351 96338.36158419322 91306.24793646933 0.9905786889686203 1.0046146171048993 0.9945108684437065 0.9651365330313293 1.0224886532117063 1.0226393397399043 1.0186206390556614 0.9672563900953122 1.0521646642859341 1.0551124787344808 1.0 16.478425964387107 -6.796229066015372 24.94264065220833 1.020009534555269 0.9902605261971157 0.2788006717869995 0.023969409972921164 193.4140847872212 138668.63161992983 0.003671958815711424 0.006939540622031751 1.5987145737992705e-07 6.796229066015372 -0.029749008358153417 IYHLPDAES(ph)DEDEDFKEQTR ddPTM_A549_PD325901_60min_R1 15 IYHLPDAESDEDEDFKEQTR 20 1 Q15019;Q15019-3;Q15019-2;H7C2Y0;B5MCX3 Q15019 SEPT2 Septin-2 1 IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(0.998)DEDEDFKEQT(0.002)R;IYHLPDAES(1)DEDEDFKEQTR 289.38 3.328199999999999e-144 19018017700.0 135600.0 137736.5 141388.6 151151.3 166014.8 152257.90000000002 153786.19999999998 147679.5 167516.5 161614.5 172438.30000000002 True False 149366.0121765559 149344.03824128886 150984.08063472042 160487.5725114912 154354.49316796838 151017.96214334594 159638.61799603788 144733.9165201731 160476.36405932085 151410.1328886969 151229.48227644633 0.9876778649781792 0.987532563050696 0.9983772896790236 1.0612188185510094 1.0206640322011389 0.998601330045462 1.0556051346140278 0.9570482841143411 1.0611447030280199 1.0011945462586478 1.0 17.206379895660785 -6.019573151722172 23.32438639063632 1.0253712492403704 0.9889426210196557 0.1314829748118056 0.030327741878833546 369.09780319604306 439840.0472797349 0.004333491635903901 0.011677833409215457 9.559316661783776e-07 6.019573151722172 -0.03642862822071469 IYHPNIDEK ddPTM_A549_MK2206_60min_R1 1 IYHPNIDEK 9 0 A0A1B0GUS4;P68036-2;P68036;P68036-3 A0A1B0GUS4 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 0 53.683 0.022943 1396000.0 1083.4 1465.1 1643.0 1138.9 1846.6 1452.4 1306.2 1721.9 1970.5 1966.4 2066.2 False True 1266.2514334130817 1539.6673320519362 1876.002105605843 1417.9305511271637 1574.9675861762278 1606.0920039749083 1543.5196322733395 1965.9845980975886 1524.1848962418987 1522.1888742758888 1553.105515781019 0.815302901539381 0.9913475397566114 1.207903833026082 0.9129647256542778 1.0140763587361383 1.0341164767335487 0.9938279251407726 1.2658409735342049 0.9813788443571545 0.980093663185799 1.0 10.600940132367242 -6.967176165272538 24.916902319586548 1.0170808096547352 0.9943031402823682 0.028136188273380935 0.11675069701926703 1254.2374775255205 952099.0368273952 0.01667334253810651 0.03150956619293519 1.0785091518568753e-07 6.967176165272538 -0.022777669372367026 IYHPNIDEK ddPTM_A549_PD325901_60min_R1 2 IYHPNIDEK 9 0 A0A1B0GUS4;P68036-2;P68036;P68036-3 A0A1B0GUS4 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 0 ; 82.749 0.0015997 6371700.0 2769.8999999999996 2909.6000000000004 2933.2 2856.3999999999996 4027.8999999999996 3531.4 3374.3999999999996 3055.1 3527.6000000000004 3297.4 3140.5 False True 3051.098208907392 3154.802203242087 3132.2645907644805 3032.8333406449224 3744.9941995006416 3502.6414492319386 3502.8146385425307 2994.1636338204135 3379.347239559443 3089.201601262197 2754.2384092697503 1.107782898763782 1.145435410610856 1.1372525269498943 1.101151349294064 1.3597204174106254 1.2717277623619436 1.271790643378347 1.0871112768390576 1.226962498302909 1.1216173555873319 1.0 11.427437730476415 -10.80390769045304 0.8428763998753299 0.9885436523802691 1.1939029232585425 0.1955343253355687 0.0889573226651861 0.5692845448517788 0.6496428999420174 0.0783323225414542 0.015635865775244968 1.5706966213443035e-11 10.80390769045304 0.20535927087827344 IYHPNVDK ddPTM_A549_PD325901_60min_R1 1 IYHPNVDK 8 0 F8VSD4;F8VV71;P61088;Q5JXB2;F8VQQ8 F8VSD4 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like 0 70.919 0.006847399999999999 3135900.0 2583.6 2843.2 2619.1 2802.9 3777.5 2786.8 2629.3 2590.6 3179.4 3186.5 3448.7 False True 2845.885170054205 3082.806442211269 2796.84787592774 2976.0287671522387 3512.1814316675395 2764.1052247605962 2729.3594503081654 2538.928450713615 3045.780874661326 2985.3038461885094 3024.5317631105186 0.940934132272895 1.0192673391007205 0.9247209469049775 0.9839634694699327 1.1612314588673744 0.9138952542914967 0.9024072696466612 0.8394451272359941 1.0070255871702118 0.9870300859787744 1.0 11.562496096363171 IYISNT(ph)FSPSKAEGDSAGTAGTPGGTPAGDK ddPTM_A549_MK2206_60min_R1 1 IYISNTFSPSKAEGDSAGTAGTPGGTPAGDK 31 1 J3KMX2;B9EGA3;Q92925-3;Q92925-2;Q92925 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 1 IYIS(0.026)NT(0.61)FS(0.351)PS(0.014)KAEGDSAGTAGTPGGTPAGDK 127.17 5.4112e-28 15163000.0 890.48 1174.0 730.27 686.65 1012.9 920.59 1087.6 1020.2 1308.0 1264.7 1273.2 True False 1040.7712538542382 1233.751585440566 833.8332669876929 854.8792808248897 863.9037517805168 1018.0062227618143 1285.2028418775715 1164.816474231466 1011.7400884467925 979.0033916277036 957.029301467618 1.0875019733023856 1.2891471384926152 0.871272452900865 0.893263434582327 0.9026931050655483 1.063714790342038 1.342908560800275 1.2171168348191674 1.0571673060535083 1.0229607287116373 1.0 9.902419286309303 -7.489293692356616 24.049704159885742 1.0724527906255883 1.0075862592420644 0.08034791046622092 0.1447013577600269 1303.0808809505804 933114.21528371 0.023966472250703537 0.038294257204784625 3.241203562966432e-08 7.489293692356616 -0.06486653138352394 IYISNTFS(ph)PSKAEGDSAGTAGTPGGTPAGDK ddPTM_A549_MK2206_60min_R1 1 IYISNTFSPSKAEGDSAGTAGTPGGTPAGDK 31 1 J3KMX2;B9EGA3;Q92925-3;Q92925-2;Q92925 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 1 IYIS(0.002)NT(0.036)FS(0.914)PS(0.046)KAEGDS(0.001)AGTAGTPGGTPAGDK 116.35 2.6856999999999996e-21 18778000.0 928.53 917.76 1016.4 1004.8 1436.3 684.41 1010.3 737.49 1453.4 1684.2 1159.8 True False 1085.2431636210524 964.4700639300974 1160.5408034922582 1250.9760451071859 1225.0221726551044 756.8338119254108 1193.858432464977 842.0314659684019 1124.2072206028804 1303.7380502722997 871.7896511484006 1.2448452011233115 1.1063105218783105 1.3312165405536627 1.4349517036125474 1.4051809069325312 0.8681381006627464 1.369434049707195 0.965865406705851 1.2895395341318545 1.4954731896104725 1.0 9.767836267605775 -7.2096434832759275 24.999971895657726 1.1282770947381011 1.302221830963201 0.10160898147045028 0.1907478340825463 434.24875411539705 209595.75275547922 0.024229731816003203 0.04196710408508037 6.17101378739084e-08 7.2096434832759275 0.17394473622509987 IYISNTFS(ph)PSKAEGDSAGTAGTPGGTPAGDK ddPTM_A549_PD325901_60min_R1 2 IYISNTFSPSKAEGDSAGTAGTPGGTPAGDK 31 1 J3KMX2;B9EGA3;Q92925-3;Q92925-2;Q92925 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 1 IYIS(0.003)NT(0.124)FS(0.75)PS(0.124)KAEGDSAGTAGTPGGTPAGDK;IY(0.001)IS(0.094)NT(0.091)FS(0.458)PS(0.246)KAEGDS(0.089)AGT(0.014)AGT(0.006)PGGT(0.001)PAGDK 141.49 1.4943000000000001e-36 69063000.0 2465.6099999999997 2175.4 2356.95 2584.63 3358.5 2461.6000000000004 2660.9 2896.7 3045.2 2937.7 2786.2 True False 2715.9169121138502 2358.7285925669635 2516.906800491728 2744.276724979374 3122.6105461960115 2441.55354574088 2762.162005600349 2838.923046082811 2917.220833968256 2752.213120648982 2443.515063177003 1.111479504686448 0.9653014332149022 1.030035312006345 1.1230856589896883 1.2779174531202047 0.9991972558443849 1.1304051475782795 1.1618193351309682 1.193862431187697 1.1263336011813314 1.0 11.254742282843473 -11.087511341976564 1.4440091827171944 1.000575422710957 1.118872129061406 0.0 0.09209706417727982 0.5604766016066082 2.104299945841787 0.06278257648883026 0.01406206174489979 8.175016879001965e-12 11.087511341976564 0.1182967063504492 IYNISGNGS(ph)PLADSK ddPTM_A549_MK2206_60min_R1 2 IYNISGNGSPLADSK 15 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 IYNIS(0.147)GNGS(0.828)PLADS(0.025)K;IYNISGNGS(1)PLADSK 202.18 1.0054999999999998e-38 95368000.0 8157.0 9242.4 7953.8 7482.2 11511.8 9932.0 8508.8 9671.1 12575.6 11374.1 12332.400000000001 True False 9533.702180497054 9712.79868251779 9081.768440394255 9315.339335888719 9818.42946958925 10982.997647671975 10054.738820308816 11042.0080415016 9727.246679106634 8804.682910344472 9269.924723075128 1.0284551887207152 1.0477753566153822 0.9797025015518728 1.0048991350167649 1.0591703560600398 1.1847990114021731 1.0846624024119733 1.191164801372693 1.0493339449556822 0.9498116946330153 1.0 13.178341908077385 -5.260877818236547 12.091687032263064 1.0476399156548708 1.0284421116385867 0.0014446442595335007 0.07336131422960367 0.7214563548996423 7240.2952658527165 0.010025882606881533 0.08108892753151009 5.484312355213603e-06 5.260877818236547 -0.019197804016284126 IYNISGNGS(ph)PLADSK ddPTM_A549_PD325901_60min_R1 2 IYNISGNGSPLADSK 15 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 IYNISGNGS(1)PLADSK;IYNISGNGS(0.999)PLADS(0.001)K 335.39 4.975899999999998e-186 136252000.0 20968.9 20438.5 22247.0 21042.6 25159.0 21498.4 22255.4 22889.4 22311.5 22828.8 23050.9 True False 23097.647291511694 22160.92412392199 23756.815202078746 22342.353610788006 23391.918633838144 21323.324158171803 23102.341425622177 22432.85296061307 21373.825245331256 21387.38567201261 20215.785431694345 1.142555028077176 1.0962188038055674 1.1751616222060197 1.1051934482723398 1.15711154102201 1.0547858370489556 1.1427872294985029 1.1096701157820363 1.0572839387096646 1.0579547227723058 1.0 14.303194636406523 -9.153695277859141 0.519120972275966 1.001562109051745 1.1333411233363222 0.5238810426737592 0.035013813436368134 0.282644925942363 0.1786000345766668 0.013399000785278104 0.009483857879932662 7.01947646296904e-10 9.153695277859141 0.13177901428457717 IYQY(ph)IQSR ddPTM_A549_MK2206_60min_R1 3 IYQYIQSR 8 0 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627;A0A2R8Y443;A0A2R8YDF3;Q13627-4;Q13627-3;Q9Y463-2;Q9Y463-3;Q9Y463 A0A2R8Y6L5 DYRK1A;DYRK1B Dual specificity tyrosine-phosphorylation-regulated kinase 1A;Dual specificity tyrosine-phosphorylation-regulated kinase 1B 1 IYQY(1)IQSR;IYQY(1)IQSR;IY(0.002)QY(0.986)IQS(0.012)R 178.99 1.1469e-06 239922800.0 5598.400000000001 6243.0 5756.999999999999 5738.5 8209.0 6195.0 5819.7 5911.7 7763.5 7950.7 9447.400000000001 True False 6543.273052261217 6560.742033991018 6573.429167360223 7144.432757611057 7001.466974396545 6850.550788091815 6877.064158583028 6749.70157882195 6005.079645761978 6154.631347999038 7101.349845024492 0.921412575785956 0.9238725280641894 0.9256591085941002 1.0060668624313376 0.9859346641402368 0.9646829036160783 0.9684164713278267 0.9504814895932887 0.8456250961877891 0.8666847123876362 1.0 12.793877566973206 -8.544598068620225 24.998365368960464 0.9255719333177919 0.9576160756721088 0.16791044346208073 0.0449093193551455 573.5249793788946 660109.057091881 0.010131780088528053 0.011488805697009748 2.8536580526686113e-09 8.544598068620225 0.03204414235431696 IYQY(ph)IQSR ddPTM_A549_PD325901_60min_R1 2 IYQYIQSR 8 0 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627;A0A2R8Y443;A0A2R8YDF3;Q13627-4;Q13627-3;Q9Y463-2;Q9Y463-3;Q9Y463 A0A2R8Y6L5 DYRK1A;DYRK1B Dual specificity tyrosine-phosphorylation-regulated kinase 1A;Dual specificity tyrosine-phosphorylation-regulated kinase 1B 1 IYQY(1)IQSR;IYQY(1)IQSR 159.46 0.00029844 383200000.0 8215.099999999999 8456.8 8022.5 9436.3 11161.099999999999 9495.1 9410.5 9340.3 11071.2 9952.7 9507.2 True False 9049.090904363024 9169.484215142176 8566.955093211523 10019.158819607786 10377.18283970472 9417.775053690377 9768.621727123185 9154.000389176395 10605.915965135084 9324.284823461594 8337.874671106307 1.085299463149924 1.0997387915793086 1.0274746780374453 1.2016442096842408 1.2445836917728375 1.1295174640039036 1.171596133601639 1.0978817444807911 1.272016716908488 1.1183047468647553 1.0 13.025463971424326 -6.255861198434549 24.91954627781726 1.144206243948069 1.073727763156505 0.20086707594326603 0.07213519699971568 918.4255199502477 4102897.379833054 0.014275805810801012 0.03663603222267377 5.548030010048006e-07 6.255861198434549 -0.07047848079156394 IYQYIQSR ddPTM_A549_PD325901_60min_R1 2 IYQYIQSR 8 0 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627;A0A2R8Y443;A0A2R8YDF3;Q13627-4;Q13627-3;Q9Y463-2;Q9Y463-3;Q9Y463 A0A2R8Y6L5 DYRK1A;DYRK1B Dual specificity tyrosine-phosphorylation-regulated kinase 1A;Dual specificity tyrosine-phosphorylation-regulated kinase 1B 0 ; 73.931 0.014181000000000001 4082800.0 3174.8 2523.0 2972.9 2990.2 3611.4 2937.9 2753.5 3308.9 3903.8 3723.7 3957.8 False True 3497.1033588357677 2735.622064469269 3174.6588714999743 3174.897862763077 3357.747722653647 2913.9747164576424 2858.285949273016 3242.901393718167 3739.736861830183 3488.5849465093843 3471.015690561318 1.0075158600825083 0.7881330159089185 0.914619568022345 0.9146884214313781 0.9673674860601527 0.8395164344493086 0.8234724945339518 0.9342802461356027 1.0774185988267337 1.0050617045598043 1.0 11.761142171477692 -8.609868258741013 5.220839740396198 1.0361963098280293 0.891075700351204 0.467138123795271 0.062120563835243996 0.11701998478468473 5.389327973159451 0.010461279083161074 0.011880097273578768 2.4554536534386524e-09 8.609868258741013 -0.14512060947682537 IYS(ph)PVR ddPTM_A549_MK2206_60min_R1 1 IYSPVR 6 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 IYS(1)PVR 69.998 0.051379999999999995 8156600.0 1633.5 1695.8 1560.0 1432.5 2547.9 1840.4 1614.7 1634.0 3188.9 2988.2 2728.0 True False 1909.19486475934 1782.108976652566 1781.2314575441972 1783.462564307369 2173.1072851827216 2035.1499064413522 1908.0700889846573 1865.624503915129 2466.619241626893 2313.163544604968 2050.5623110302104 0.9310591804450717 0.8690830642240897 0.8686551235057567 0.8697431698192827 1.0597616436688257 0.9924838155339376 0.9305106597936229 0.9098111741738939 1.2028989455032235 1.1280630352768095 1.0 11.001803868584918 -8.741141614627878 24.994323426015676 1.0958133959393899 0.9294520036654409 0.568931674545808 0.07002368939778737 170.24685887683398 209639.01554682918 0.015367181051143942 0.017414248509032684 1.8149237564235829e-09 8.741141614627878 -0.16636139227394897 IYS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 IYSPVR 6 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 IYS(1)PVR 82.671 0.041544 16333000.0 3955.0 4165.4 4809.2 4497.2 4876.0 4272.7 3935.0 5081.9 4863.7 4364.5 4669.8 True False 4356.508688482882 4516.432876472572 5135.581232068915 4774.981830117752 4533.52658128681 4237.904547809172 4084.748578314622 4980.537517826575 4659.295602972352 4088.924725149771 4095.44420430119 1.0637450960527095 1.1027943859494518 1.253974166385989 1.1659252554589528 1.1069682200835576 1.0347850773692302 0.9973884088140341 1.2161165601025223 1.1376777146857437 0.9984081142786484 1.0 11.999804224095373 -10.726013649961304 0.8977816400198243 0.9971102480893582 1.1214741043036012 0.2962472907304512 0.07126644535848618 0.6862211975962365 0.9480412636267987 0.05720114665945922 0.013551888534162488 1.8792577504329414e-11 10.726013649961304 0.12436385621424295 IYSFTDNAPS(ph)PSIGGSSR ddPTM_A549_MK2206_60min_R1 2 IYSFTDNAPSPSIGGSSR 18 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 IYSFTDNAPS(1)PSIGGSSR;IYSFTDNAPS(0.497)PS(0.497)IGGS(0.005)S(0.001)R 159.04 1.0825e-22 8283600.0 3573.8 3954.3 3479.1000000000004 3109.4 4629.1 4123.2 3440.3999999999996 3107.6000000000004 5015.1 5978.6 4989.6 True False 4176.970068978837 4155.556979819108 3972.488694834628 3871.203139586272 3948.165522131692 4559.514287241351 4065.476146741075 3548.1118166258625 3879.187857469044 4628.030107681971 3750.544614045579 1.1136969423950642 1.1079876144538532 1.059176493983802 1.0321709346127583 1.0526912564500723 1.2156939208685122 1.0839695471201956 0.9460257593892852 1.0342998835267025 1.233962153216431 1.0 11.87288438825291 -8.079851083344053 10.224344476767222 1.0115004505296095 1.0956303798213425 0.0 0.08340643560498003 0.4390475960463198 54.55718372979765 0.008117812174407331 0.010485824100059596 8.320490262069767e-09 8.079851083344053 0.08412992929173302 IYSFTDNAPS(ph)PSIGGSSR ddPTM_A549_PD325901_60min_R1 2 IYSFTDNAPSPSIGGSSR 18 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 IYSFTDNAPS(0.999)PS(0.001)IGGSSR;IYSFTDNAPS(0.999)PS(0.001)IGGSSR 281.09 5.882599999999998e-116 13632900.0 5081.8 5989.5 5950.700000000001 5547.0 6242.3 6448.1 6305.9 5935.700000000001 6375.3 5677.9 6351.4 True False 5597.700594976566 6494.256185152082 6354.5502864660375 5889.625591848967 5803.862382765922 6395.588811460738 6545.874475220886 5817.307807033429 6107.368311702954 5319.396425003522 5570.218064841871 1.0049338337951543 1.1658890387330723 1.1408081716898515 1.057342014852728 1.0419452730942023 1.1481756615290246 1.175155873436476 1.0443590788215529 1.0964325347065802 0.9549709478303039 1.0 12.443518092462192 -10.556679765525947 0.6035309214092663 0.9899343839699489 1.1023567356647554 0.39635063082232214 0.05529650845023653 0.9489218158918737 0.539342150880622 0.0565874162651768 0.011426781923462387 2.7753658138541537e-11 10.556679765525947 0.11242235169480652 IYSPVRS(ph)PSAR ddPTM_A549_MK2206_60min_R1 2 IYSPVRSPSAR 11 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 IYS(0.003)PVRS(0.975)PS(0.022)AR;IYS(0.001)PVRS(0.979)PS(0.02)AR 79.089 0.00027733 15771200.0 5086.200000000001 5277.2 4980.9 4297.6 6661.5 5591.1 5227.9 5373.1 7483.5 7808.0 8519.5 True False 5944.62621434892 5545.786939256349 5687.266517231986 5350.512192926593 5681.60217443569 6182.746490928193 6177.741758966307 6134.753379428633 5788.4991986938585 6044.167377108492 6403.87302376168 0.9282860844197384 0.8660051376219691 0.8880979519939397 0.8355119117873553 0.8872134337070721 0.9654698754936282 0.9646883590670351 0.9579754871256075 0.9039059920794078 0.9438299845548944 1.0 12.64472898698761 -7.214379677501955 5.7756171541518455 0.9553685112502626 0.8774785575576363 0.6140235625014615 0.02956369030312944 0.14195260349261604 11.769653392040915 0.005733420826263581 0.009935444352163416 6.10408148500691e-08 7.214379677501955 -0.0778899536926263 IYSPVRS(ph)PSAR ddPTM_A549_PD325901_60min_R1 2 IYSPVRSPSAR 11 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 IYS(0.011)PVRS(0.942)PS(0.047)AR;IYS(0.003)PVRS(0.977)PS(0.02)AR 106.29 4.4533e-05 37359000.0 3206.9 3255.7 3472.4 3637.3 3969.2000000000003 3817.1 3769.1 3787.3 4061.9 3906.2 4224.6 True False 3532.4621272049962 3530.069264880142 3708.057945237481 3861.9677600923474 3690.4170849966367 3786.0148031554704 3912.53516303066 3711.759330420628 3891.1924686377433 3659.5618653637366 3705.000981945863 0.9534308207793647 0.9527849741691979 1.0008250910881034 1.042366190700453 0.9960637265630179 1.0218660728038618 1.0560146089288756 1.00182411516426 1.0502540991484686 0.9877357342674005 1.0 11.855258209554394 -5.872893402643465 3.3473038152985657 1.0238314675385225 0.9519859804527888 0.5674215422039094 0.02185084667616937 0.11591911674022223 2.513287522753871 0.0030433581652082333 0.011294809913870416 1.3400055507357528e-06 5.872893402643465 -0.07184548708573368 IYSQS(ph)TLSLSTVANEAHNNLGVK ddPTM_A549_MK2206_60min_R1 1 IYSQSTLSLSTVANEAHNNLGVK 23 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 IY(0.002)S(0.123)QS(0.61)T(0.111)LS(0.137)LS(0.008)T(0.008)VANEAHNNLGVK 74.274 3.6497e-05 1985200.0 991.54 1056.8 1337.5 735.21 1486.5 1351.3 1161.0 1119.6 1774.0 1781.3 2078.0 True False 1158.887711174457 1110.5866060422402 1527.177611836772 915.3364830048308 1267.8378191546424 1494.2936690796566 1371.9386717725813 1278.3067286311982 1372.1918324958785 1378.903092833421 1561.9752501175863 0.7419373073211086 0.7110142148274339 0.9777220296683993 0.5860121554012612 0.8116888017650721 0.9566692359351824 0.8783357301399629 0.8183911547477891 0.8784978074348997 0.882794457037406 1.0 10.609155878464957 -14.999999989716565 0.029171301240638138 2.212341649889859 0.0009066717287174135 0.23731052933754193 0.10366540853578987 766.1074501132712 1.7291126576563287 99.90530330585092 42.551518554426245 1.0000000236784833e-15 14.999999989716565 -2.2114349781611415 IYSQS(ph)TLSLSTVANEAHNNLGVK ddPTM_A549_PD325901_60min_R1 2 IYSQSTLSLSTVANEAHNNLGVK 23 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 IYS(0.022)QS(0.728)T(0.179)LS(0.072)LSTVANEAHNNLGVK;IYS(0.134)QS(0.693)T(0.161)LS(0.013)LSTVANEAHNNLGVK 160.43 1.5557e-33 8888400.0 3515.6 3845.6000000000004 4479.299999999999 4012.6 4515.200000000001 5416.7 4879.0 4716.8 4606.4 4707.4 5066.9 True False 3872.501123952067 4169.682208134375 4783.292234219052 4260.449188724205 4198.067928594383 5372.58819110116 5064.673014891241 4622.7197237419805 4412.8090271875 4410.173960630088 4443.703421725488 0.8714580511874882 0.9383349455205744 1.0764202243636012 0.9587609217785904 0.9447227976713792 1.2090339253592641 1.1397414575711335 1.0402853847404112 0.9930476020548663 0.9924546132103523 1.0 12.117546817346808 -5.553724386985986 4.952442582159791 1.021171058487168 0.8847259035536907 0.3057672383422201 0.07678499046028203 0.1731007227103334 10.522985953291828 0.011101374540550154 0.04985165420270465 2.794316614622215e-06 5.553724386985986 -0.1364451549334773 IYSYMS(ph)PNK ddPTM_A549_PD325901_60min_R1 1 IYSYMSPNK 9 0 C9JKQ0;A0A0C4DFR3;Q9NQR1-2;Q9NQR1 C9JKQ0 SETD8 N-lysine methyltransferase SETD8 1 IY(0.003)S(0.023)Y(0.028)MS(0.945)PNK 42.095 0.039622000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERT(ph)PR ddPTM_A549_MK2206_60min_R1 1 KAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR 56 2 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 KAAAAAAAAAAAAT(0.003)GT(0.01)EAGPGT(0.043)AGGS(0.043)ENGS(0.043)EVAAQPAGLS(0.163)GPAEVGPGAVGERT(0.693)PR 44.611999999999995 0.0037283999999999998 3125100.0 240.41 285.9 299.03 218.5 264.88 0.0 163.05 288.03 429.71 421.28 530.59 True False 280.98533053981816 300.4510888223661 341.4369504804113 272.03250980883786 225.91650288441426 0.0 192.6740744466145 328.85913455488065 332.38137110586473 326.1125554083332 398.8298594609672 0.7045243074818417 0.7533314813199705 0.8560967600115887 0.682076588188506 0.5664483175601458 0.0 0.48309841872677334 0.8245599639890191 0.8333913903916071 0.8176733704168638 1.0 8.639629614765704 -8.45344849990895 3.6054850165609325 0.919222551312554 0.5778167928208622 0.2964370747928109 0.21410109586935605 0.2242018178632995 5.690702420175312 0.039724507408134734 0.047646834444014186 3.520071622355845e-09 8.45344849990895 -0.34140575849169186 KAAGGAT(ph)PK ddPTM_A549_MK2206_60min_R1 5 KAAGGATPK 9 1 P16403 P16403 HIST1H1C Histone H1.2 1 KAAGGAT(1)PK;KAAGGAT(1)PK;KAAGGAT(1)PK;KAAGGAT(1)PK;KAAGGAT(1)PK 64.827 0.0037655 798514300.0 30547.6 27205.7 22965.21 17310.64 34192.2 31798.3 30601.39 34536.8 33043.01 38782.299999999996 38360.899999999994 True False 35703.28806288485 28590.353925059993 26222.022103274718 21551.747577104157 29162.572674133444 35163.174999996765 36161.266452191885 39432.49716451409 25558.820993844227 30021.351494522867 28834.82982302009 1.2382000615929203 0.9915215071682192 0.9093870941572385 0.7474206613800948 1.0113662141626965 1.2194687888161033 1.254082880812523 1.367530081035312 0.8863870933422162 1.0411489049453493 1.0 14.815524887492966 KAAGGAT(ph)PK ddPTM_A549_PD325901_60min_R1 3 KAAGGATPK 9 1 P16403 P16403 HIST1H1C Histone H1.2 1 KAAGGAT(1)PK;KAAGGAT(1)PK;KAAGGAT(1)PK 72.006 0.0037049999999999995 929066000.0 28615.4 30995.4 29244.1 25912.7 29535.7 23036.6 18377.199999999997 24429.8 26386.7 35625.1 38042.2 True False 31520.414342455922 33607.491136365745 31228.780485059146 27513.26862698842 27461.21432463348 22848.997567360388 19076.55440238969 23942.528474192637 25277.75876122099 33375.72510618239 33363.25056937486 0.9447644880079361 1.0073206466043534 0.9360233176357519 0.8246579142454328 0.8230976855067282 0.6848552577288191 0.5717834466615384 0.7176317674564423 0.7576527565459767 1.0003739005221206 1.0 15.025972236433276 -6.1626208308855634 3.4843877390701694 0.8266281276701252 0.9754802580591783 0.24624878966006902 0.12214421792847761 0.36705558681502415 8.321050407527725 0.020885463721133084 0.06052346034037228 6.87668560208671e-07 6.1626208308855634 0.1488521303890531 KAAGGAT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 KAAGGATPKK 10 2 P16403 P16403 HIST1H1C Histone H1.2 1 KAAGGAT(1)PKK 47.062 0.011715 105140000.0 10989.0 9952.7 8249.0 8659.4 9157.3 7101.7 5551.2 7434.4 7592.5 11038.0 11942.0 True False 12104.595190325768 10791.44895800369 8808.826745266671 9194.271471075705 8514.122838969992 7043.866109761131 5762.453953733195 7286.115059826023 7273.4136286299745 10341.058796243136 10473.209706575184 1.155767480023472 1.0303860287671611 0.841081864305305 0.8778847868675302 0.8129430305997541 0.6725604000212965 0.5502089727197451 0.695690744667485 0.6944779902634485 0.9873820047497872 1.0 13.35441602985217 -5.533077286645962 1.385064399544428 0.8030386244844789 1.220897600461877 0.4617200167758828 0.12877932517250804 0.6944239885375258 1.6576110867222436 0.022832967121890587 0.34953403527905685 2.9303717125952158e-06 5.533077286645962 0.4178589759773981 KAALLAQYADVT(ph)DEEDEADEKDDSGATTMNIGSDK ddPTM_A549_MK2206_60min_R1 1 KAALLAQYADVTDEEDEADEKDDSGATTMNIGSDK 35 2 Q96MW1 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 1 KAALLAQYADVT(0.988)DEEDEADEKDDS(0.004)GAT(0.004)T(0.004)MNIGSDK 74.60300000000001 6.9177e-06 2489300.0 370.2 596.42 791.71 493.61 540.32 565.1 540.15 374.41 965.55 507.46 644.11 True False 432.6807094789763 626.7752304842102 903.9863828540491 614.5444721589948 460.8396437575758 624.8985069169786 638.2882631851506 427.4837640825359 746.8544666665138 392.8244335537236 484.1597104683537 0.893673513354552 1.2945629653444248 1.867124346178195 1.2693011394205291 0.951833937837952 1.2906867163987699 1.3183423762536954 0.8829395648576539 1.5425787204475179 0.811352999971277 1.0 8.919339219698301 -11.177124647328249 1.5877321303532343 1.0000666825735507 1.3014286560142132 0.15330042192601323 0.2835911715751363 0.6630714774709826 3.00355670414773 0.20655915412525894 0.04359511488102119 6.650822428331832e-12 11.177124647328249 0.3013619734406625 KAALLAQYADVT(ph)DEEDEADEKDDSGATTMNIGSDK ddPTM_A549_PD325901_60min_R1 5 KAALLAQYADVTDEEDEADEKDDSGATTMNIGSDK 35 2 Q96MW1 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 1 KAALLAQYADVT(1)DEEDEADEKDDSGATTMNIGSDK;KAALLAQYADVT(0.994)DEEDEADEKDDS(0.001)GAT(0.002)T(0.002)MNIGSDK;KAALLAQY(0.002)ADVT(0.235)DEEDEADEKDDS(0.235)GAT(0.235)T(0.235)MNIGS(0.059)DK;KAALLAQYADVT(0.902)DEEDEADEKDDS(0.032)GAT(0.032)T(0.032)MNIGS(0.001)DK;KAALLAQYADVT(0.998)DEEDEADEKDDS(0.001)GAT(0.001)T(0.001)MNIGSDK 102.71 2.2982e-14 56610200.0 3852.79 3808.2799999999997 4663.7300000000005 4255.26 5288.32 5751.01 4453.8 5505.4 6058.0 5165.17 4560.5 True False 4243.922404525907 4129.217120759825 4980.23876308674 4518.097745803362 4916.8866469135855 5704.175681301287 4623.291796212876 5395.590478097248 5803.403327262478 4839.040284706576 3999.5874113914006 1.0610900495482622 1.032410770420774 1.2451881283810182 1.1296409556983726 1.2293484655216147 1.4261910278682681 1.1559421811972594 1.3490367688251617 1.451000498384796 1.209884867355141 1.0 11.965635467102013 -5.761952420836085 24.665114514639143 1.2335701896483813 1.0467503476885933 0.26919088762901766 0.1243962661463098 15.46000609231938 743517.9560868107 0.023652366791534013 0.08073913206839745 1.7300058797548726e-06 5.761952420836085 -0.18681984195978796 KAALSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KAALSSPR 8 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 KAALS(0.053)S(0.947)PR;KAALS(0.194)S(0.806)PR 73.887 0.0021448 103768000.0 8331.2 8876.900000000001 9528.0 8132.9 11478.599999999999 8614.3 8446.3 7430.5 11872.900000000001 13248.1 11970.4 True False 9737.30288171596 9328.696293694516 10879.213671462248 10125.460865099752 9790.113145609477 9525.859508290441 9980.883379321926 8483.796129951877 9183.707107125321 10255.345008794951 8997.819313766875 1.0821847541234415 1.0367730189270852 1.2090944807945627 1.125323871486012 1.0880539833279796 1.0586853520958852 1.1092558131336268 0.9428724709965525 1.020659204955809 1.1397589406028672 1.0 13.135359680946706 -8.238796266547213 24.547637093985585 1.0050120770643636 1.101770951892404 0.2373583382513641 0.06110347577280957 392.07326327227673 425050.99831733824 0.007308245006841967 0.009431200314210495 5.7703709586451215e-09 8.238796266547213 0.09675887482804035 KAALSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KAALSSPR 8 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 KAALS(0.035)S(0.965)PR;KAALS(0.032)S(0.968)PR 74.533 0.0020944 148858000.0 8092.3 8228.900000000001 8869.4 9096.6 9470.2 9372.8 9983.0 10201.9 10001.9 9979.6 9376.4 True False 8913.824338763598 8922.378282327061 9471.33082003493 9658.476322122466 8805.045822416396 9296.471024341938 10362.908527907211 9998.41510126428 9581.55492554417 9349.486352870807 8223.162241896795 1.083989841930626 1.0850300674925006 1.151786933228527 1.1745452707855846 1.070761534723822 1.1305226323976272 1.2602096642467377 1.2158844501842148 1.1651910352353745 1.136969705551402 1.0 13.005477578008913 -10.638975209058662 0.974996603181376 1.0023730631498418 1.149509235429123 0.058369848311734085 0.06700141840187245 0.37659838983747135 0.6528535840399806 0.03694888258246526 0.01060267936871731 2.2962797234852615e-11 10.638975209058662 0.14713617227928122 KAANMLQQS(ph)GSK ddPTM_A549_MK2206_60min_R1 1 KAANMLQQSGSK 12 1 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 1 KAANMLQQS(0.979)GS(0.021)K 73.887 0.00057401 2326800.0 1313.1 1360.6 1420.0 1127.8 1721.8 1345.1 1048.2 1509.0 2099.3 2108.9 2010.1 True False 1534.719177787261 1429.848728407525 1621.3773523799753 1404.1110506288667 1468.5255008546685 1487.437589194883 1238.6443718794326 1722.9053711186837 1623.8119018932348 1632.4980253053398 1510.936694062253 1.0157402251321777 0.9463326518090458 1.0730941665205014 0.9292983988983823 0.9719305293370305 0.9844473266419977 0.8197857506188796 1.1402895818795284 1.074705451442515 1.0804542848954584 1.0 10.561227499714308 -8.28835241634858 24.99967179870446 1.044139162595516 0.9664226572734581 0.35240114890700536 0.06802187939173981 835.99282156898 776555.9295833043 0.011093581778842235 0.01341337748806578 5.14810722287354e-09 8.28835241634858 -0.07771650532205798 KAANMLQQS(ph)GSK ddPTM_A549_PD325901_60min_R1 2 KAANMLQQSGSK 12 1 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 1 KAANMLQQS(0.824)GS(0.176)K;KAANMLQQS(0.994)GS(0.006)K 78.932 0.00039568 6828200.0 3436.1 3165.5 3768.1 3630.2 4467.4 4248.2 3608.7 3954.0 4721.1 4420.7 3901.4 True False 3784.930342476876 3432.267794323216 4023.8259254260315 3854.4292092176156 4153.625235693332 4213.604067686221 3746.031053256412 3875.134368147005 4522.688585067495 4141.576247558619 3421.5525330122596 1.1062026100603828 1.0031316956871397 1.1760234240459093 1.1265146953112133 1.2139592175241487 1.2314889299614689 1.0948337098768695 1.1325660882767221 1.3218235118213484 1.2104377201867675 1.0 11.740435382708275 -5.773299085679329 24.98198693421003 1.1586390722356041 1.0546671469611026 0.21330034244529994 0.08215449595479496 326.2861922820946 687313.6808494191 0.01593089781057267 0.05010050085916537 1.685391946380479e-06 5.773299085679329 -0.1039719252745015 KAAS(ph)EELLEK ddPTM_A549_MK2206_60min_R1 4 KAASEELLEK 10 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK 121.76 1.7302e-05 68885400.0 8514.6 11377.0 9791.4 8311.5 14358.7 10282.2 10684.7 10004.9 15830.3 15214.7 16129.100000000002 True False 9951.65631801645 11956.040704904024 11179.967752178367 10347.817873117418 12246.554250854875 11370.255579228036 12625.97168500302 11423.125213721223 12244.76232579453 11777.68870293194 12123.799329485832 0.8208364430623167 0.9861628669344759 0.9221505114315107 0.8535127967642027 1.0101251198599515 0.9378459070643697 1.0414203783706544 0.9422067211174862 1.0099773175900817 0.9714519667352025 1.0 13.565554257804491 -6.776508558866346 24.998703005312628 0.9979972972243777 0.9040215142456587 0.43887927592330744 0.048768816098876996 144.0996091716152 239050.93538846684 0.00634696621726211 0.01202777062394269 1.6729826657376604e-07 6.776508558866346 -0.093975782978719 KAAS(ph)EELLEK ddPTM_A549_PD325901_60min_R1 2 KAASEELLEK 10 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 KAAS(1)EELLEK;KAAS(1)EELLEK 101.36 0.00017866 141145000.0 8011.4 8204.1 7402.5 7851.299999999999 8962.0 8430.8 8038.5 8768.2 8944.0 8151.1 8677.5 True False 8824.711430319034 8895.488299291457 7904.878164848655 8336.256969403963 8332.540037221566 8362.142360022828 8344.409516335985 8593.311372480171 8568.114783597824 7636.43815492457 7610.222511204671 1.1595865189652796 1.1688867554390776 1.0387184018877447 1.095402526947187 1.0949141138716265 1.0988039242888223 1.0964737895705885 1.1291800416910387 1.1258691544147141 1.003444793326516 1.0 12.893722921192284 -10.740163745589967 0.8670174886214579 0.9960195693624347 1.110885784279356 0.6116826597624638 0.03373621688057329 0.37238722104330085 0.4695937117474253 0.02840211972766007 0.006374681650644704 1.8190148912825603e-11 10.740163745589967 0.11486621491692128 KAAS(ph)LMNLENI ddPTM_A549_MK2206_60min_R1 1 KAASLMNLENI 11 1 D6RBP0;Q96NL6-3;Q96NL6-2;Q96NL6 D6RBP0 SCLT1 Sodium channel and clathrin linker 1 1 KAAS(1)LMNLENI 53.967 0.015931999999999998 1027200.0 742.72 852.23 702.47 428.08 789.13 723.94 857.24 678.85 1139.4 1401.0 1371.9 True False 868.0729782393988 895.6048668313576 802.0908089622263 532.9596192172415 673.0500223541895 800.54685028752 1012.9894117057088 775.0790663909339 881.3277192479171 1084.5131269632416 1031.2193674861962 0.841792741301495 0.8684911232947204 0.7778081310841585 0.5168246796183021 0.652673954325435 0.7763109145622559 0.9823219420083947 0.7516141480937701 0.8546462052941558 1.051680332194458 1.0 10.010135549201502 -7.619843536314614 5.508557456307998 0.9164410437948262 0.7283807884743254 0.4017010206043672 0.11531062168829675 0.1797908804884084 8.447229089539944 0.01867343459522924 0.027845224260850603 2.3996973045302152e-08 7.619843536314614 -0.18806025532050075 KAAS(ph)LSSIPSGIER ddPTM_A549_MK2206_60min_R1 2 KAASLSSIPSGIER 14 1 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 KAAS(0.992)LS(0.007)S(0.001)IPSGIER;KAAS(0.991)LS(0.008)S(0.002)IPSGIER 81.723 0.00017891 20817900.0 2346.0 3007.1000000000004 3164.3 2858.2 3430.2 2879.9 2729.0 2988.5 4235.9 3691.6 4158.0 True False 2741.947445806804 3160.148545637416 3613.0453212225034 3558.4591283094715 2925.622123958462 3184.6491064770985 3224.823975251832 3412.1290268974058 3276.4754133423276 2857.664996072452 3125.4538450379814 0.8772957726315369 1.01110069203374 1.156006615473983 1.1385415701975365 0.936063134831834 1.0189397330352827 1.031793824238234 1.091722737264079 1.0483198843406727 0.914320011671049 1.0 11.609849982419115 -6.760761528701375 24.99994553187251 1.023995631201224 1.0511386343453648 0.020973747924940445 0.08315517491337253 70.25660011174078 2590985.567448736 0.011120001859085061 0.02211016969202001 1.734756291750818e-07 6.760761528701375 0.027143003144140865 KAAS(ph)LSSIPSGIER ddPTM_A549_PD325901_60min_R1 2 KAASLSSIPSGIER 14 1 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 KAAS(0.983)LS(0.014)S(0.003)IPSGIER;KAAS(0.744)LS(0.245)S(0.012)IPSGIER 100.97 1.2737999999999999e-05 40492000.0 5148.299999999999 4279.3 5199.9 6676.7 6706.4 6952.4 5578.6 6562.1 6164.5 6145.1 6588.5 True False 5670.951626021854 4639.931629204655 5552.796483538872 7089.104595114116 6235.365599824007 6895.781959460873 5790.896675727055 6431.213767632137 5905.427502626208 5757.097337270671 5778.156267942602 0.9814465658335475 0.8030124859978511 0.9609979768712671 1.2268800403417086 1.0791272009062851 1.1934225451324143 1.0022049261379684 1.1130217788177033 1.0220262708002048 0.9963554238245914 1.0 12.496393506206923 -6.003567756343241 24.95615271078581 1.04855339378004 0.8896734170742376 0.39924984797925656 0.0862052259906181 121.06898266961528 846894.5270171729 0.012108729334022877 0.036551870509215156 9.918185888426043e-07 6.003567756343241 -0.15887997670580234 KAAS(ph)LTEDR ddPTM_A549_PD325901_60min_R1 1 KAASLTEDR 9 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.976)LT(0.024)EDR 64.22399999999999 0.0026646 6697200.0 3032.6 2956.2 2660.7 3026.8 3829.7 2553.3 2647.8 3076.9 3150.8 3140.2 3284.1 True False 3340.4673195178725 3205.329348784802 2841.2711020888623 3213.7585616384445 3560.7150837477634 2532.506771343918 2748.5634779317543 3015.528815718646 3018.3828332021494 2941.927236090114 2880.1765196251504 1.1598133991984034 1.1128933684946398 0.9864920023924952 1.115819999135577 1.2362836303558171 0.8792887359811957 0.9543038279783889 1.0469944446707424 1.0479853622287658 1.021439906909942 1.0 11.491941518615706 -7.258463253370628 24.999756897312402 1.0105582474128842 1.1138395807826051 0.43710521928290713 0.07178433139720564 249.13827283297059 2092781.9928940046 0.010920288226555065 0.018404166336722448 5.514888631162809e-08 7.258463253370628 0.1032813333697209 KAAS(ph)LTEDRDR ddPTM_A549_MK2206_60min_R1 3 KAASLTEDRDR 11 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.679)LT(0.321)EDRDR;KAAS(0.859)LT(0.141)EDRDR;KAAS(0.968)LT(0.032)EDRDR 97.79700000000001 5.85e-05 307924000.0 25509.7 24353.5 20775.0 16593.1 18514.7 13730.2 11373.2 11797.7 15557.900000000001 21336.1 21381.3 True False 29815.11370771432 25592.98912779117 23721.20739133377 20658.410244892566 15791.212156274787 15183.12065063087 13439.563222914672 13470.060103940954 12034.06049086112 16516.26019143499 16071.733116140116 1.8551274770592319 1.5924224813121919 1.4759582690874598 1.285387835624663 0.9825456932467591 0.9447096054241435 0.8362236434487532 0.8381211911995714 0.7487717972852509 1.0276589383411585 1.0 13.972237891838194 -6.240916273097956 0.9110420825617305 0.8688484054628506 1.8442673321483418 0.9363897401056924 0.08608548294231586 0.14834675874666053 0.192509518579825 0.015964866703468836 0.10199963884233598 5.742271558234431e-07 6.240916273097956 0.9754189266854912 up KAAS(ph)LTEDRDR ddPTM_A549_PD325901_60min_R1 3 KAASLTEDRDR 11 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.871)LT(0.129)EDRDR;KAAS(0.755)LT(0.245)EDRDR;KAAS(0.852)LT(0.148)EDRDR 76.759 0.0003946 348253000.0 25866.300000000003 25160.399999999998 25338.0 24895.399999999998 28756.5 24589.1 24634.7 26035.9 28218.3 28917.4 28487.7 True False 28492.227734236385 27280.75520843149 27057.589049771712 26433.132316444353 26736.7426445394 24388.854522090107 25572.186989125097 25516.593549731584 27032.382982781586 27091.550428925653 24983.89349840912 1.140423838904479 1.0919336976107676 1.0830012964750524 1.0580069242661283 1.070159166594346 0.9761830966675829 1.0235469099623498 1.0213217387976932 1.0819924038061923 1.0843606274038409 1.0 14.608710704098844 -5.635300872444579 0.8137215872463679 1.0338826572008128 1.1622930402016025 0.5094145057236463 0.03172991948108695 1.0686267703890322 0.7061676809075969 0.005655051002393731 0.10922817862350065 2.315789751081593e-06 5.635300872444579 0.12841038300078966 KAAS(ph)PS(ph)PQSVR ddPTM_A549_MK2206_60min_R1 3 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KAAS(0.99)PS(0.976)PQS(0.033)VR;KAAS(0.799)PS(0.886)PQS(0.315)VR;KAAS(0.952)PS(0.941)PQS(0.107)VR 69.86399999999999 0.0054789999999999995 28875700.0 4219.599999999999 3774.0 3549.5 3245.91 4210.1 3354.5200000000004 3134.61 3592.04 4957.9 5340.1 6239.2 True False 4931.7653206847335 3966.080479942674 4052.8724734314915 4041.158095714435 3590.7998670857464 3709.49307984984 3704.128061950951 4101.222670161142 3834.9435661394123 4133.767701139479 4689.83444684006 1.0515862290208735 0.845676009441007 0.8641824182434107 0.8616845949513862 0.7656559965576554 0.7909646112026919 0.7898206437642457 0.8744919925530599 0.8177140599756862 0.8814314765257331 1.0 12.195321280550196 -10.767751626079436 0.9243398238034012 1.0037651315861784 0.8450079513551827 0.09156449069463435 0.0797180684029424 0.505299852583612 0.73670057901343 0.05527713282129403 0.012745084048913025 1.707058380141036e-11 10.767751626079436 -0.15875718023099572 KAAS(ph)PS(ph)PQSVR ddPTM_A549_PD325901_60min_R1 3 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KAAS(0.916)PS(0.789)PQS(0.295)VR;KAAS(0.989)PS(0.891)PQS(0.12)VR;KAAS(0.978)PS(0.867)PQS(0.155)VR 84.71799999999999 0.00080913 47115600.0 8520.5 7906.3 8683.6 8471.0 10839.5 8693.3 8246.699999999999 9566.9 9490.599999999999 9476.3 10292.2 True False 9385.494887539426 8572.591648162268 9272.921314728772 8994.234430963148 10078.170914244953 8622.504647054428 8560.532681267396 9376.08067441214 9091.74308645052 8877.96480076452 9026.324647631305 1.0397914161000594 0.9497322534717266 1.027319720564469 0.996444819135042 1.1165309589091363 0.955261968038913 0.94839627594315 1.038748443074515 1.0072475167217017 0.9835636482556919 1.0 13.139922953208586 KAAS(ph)PSPQSVR ddPTM_A549_MK2206_60min_R1 6 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAAS(0.685)PS(0.272)PQS(0.043)VR;KAAS(0.823)PS(0.176)PQSVR;KAAS(0.754)PS(0.246)PQS(0.001)VR;KAAS(0.97)PS(0.028)PQS(0.002)VR;KAAS(0.745)PS(0.151)PQS(0.104)VR;KAAS(0.577)PS(0.417)PQS(0.005)VR 92.84200000000001 0.0001222 384305200.0 19556.39 18979.68 18308.91 16303.23 23305.600000000002 18122.34 18408.58 17862.52 25219.300000000003 29318.300000000003 30134.32 True False 22857.030524169513 19945.6646432322 20905.38874701637 20297.522081879804 19877.377112741626 20040.033990164284 21753.18070148089 20394.586911673243 19507.16881694664 22695.275667556332 22651.13667907766 1.0090897798202787 0.8805591050825965 0.9229289038870268 0.8960928702809058 0.8775443543679602 0.8847253130865971 0.9603571339346432 0.9003780781787989 0.8612004374581771 1.0019486434214775 1.0 14.467295828943321 -10.977985679316822 1.2447994140855543 1.0000662871223687 0.9041410474903447 0.4170461776676069 0.040661045417039667 0.3487589962115263 0.9602145101294733 0.028350204504613705 0.00650919071633365 1.0519965624083169e-11 10.977985679316822 -0.09592523963202393 KAAS(ph)PSPQSVR ddPTM_A549_PD325901_60min_R1 4 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAAS(0.973)PS(0.026)PQS(0.001)VR;KAAS(0.882)PS(0.118)PQSVR;KAAS(0.604)PS(0.239)PQS(0.157)VR;KAAS(0.878)PS(0.122)PQSVR 115.68 8.5998e-06 625779000.0 14073.2 13792.7 15159.8 14197.300000000001 18172.3 13820.0 14370.8 14523.8 16615.9 15239.5 16258.599999999999 True False 15501.900903857728 14955.059234484865 16188.635191283021 15074.234976592277 16895.940339031644 13707.454502006392 14917.688658003493 14234.111415299321 15917.59150634874 14277.275369210658 14258.895271757101 1.0871740487892267 1.0488231345738734 1.1353358645776856 1.0571811272399299 1.1849403489552093 0.9613265432390854 1.0462022739974308 0.9982618669970268 1.1163271209290002 1.0012890267516 1.0 13.799574590805557 -7.262964705770926 24.99995820071039 1.0449109260231444 1.0989835356631714 0.32060336151892865 0.05334052500661666 194.6050312294242 3189576.6851443346 0.008675488672034711 0.014278016559972467 5.4580221552469786e-08 7.262964705770926 0.054072609640027025 KAASLT(ph)EDRDR ddPTM_A549_MK2206_60min_R1 1 KAASLTEDRDR 11 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.27)LT(0.73)EDRDR 74.85300000000001 0.00047378 61074000.0 5476.7 5221.3 5504.9 3677.5 4379.7 2921.6 2905.1 2949.3 4409.8 4071.8 3774.7 True False 6401.033067540547 5487.041868024557 6285.577596560933 4578.487665089249 3735.4519317535064 3230.761772798878 3432.9190657765107 3367.372306852441 3410.9873410035666 3151.977552012082 2837.337813579814 2.255999633496051 1.93386978517784 2.2153081548758347 1.6136561685309725 1.3165340813050947 1.1386595411149472 1.2099084745377089 1.1868069747408374 1.2021787905120787 1.1108925898517854 1.0 11.4703222128431 -6.586709956206625 1.6289235903522972 1.1166489817779017 2.1411116470100504 0.9430256252200608 0.1045862212333772 0.0632901349105492 0.33290332702232767 0.016969204384785174 0.047650065413566076 2.58994203181271e-07 6.586709956206625 1.0244626652321487 up KAASLT(ph)EDRDR ddPTM_A549_PD325901_60min_R1 2 KAASLTEDRDR 11 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.36)LT(0.64)EDRDR;KAAS(0.374)LT(0.626)EDRDR 84.759 0.00016922 105730000.0 8559.6 8193.6 8917.1 8624.4 10523.599999999999 10898.9 8977.5 9805.0 10303.5 10659.0 10103.900000000001 True False 9428.564290755525 8884.103427441702 9522.268028878341 9157.109600566477 9784.458640449104 10810.142971918773 9319.1436751765 9609.431583126303 9870.479726386426 9985.98892092368 8861.184353899262 1.0640298084540578 1.0025864571401626 1.0746044375759067 1.0333956765651757 1.1041931021493268 1.2199433552199932 1.0516815024930295 1.0844409956212888 1.113900730667344 1.126936143307916 1.0 13.113283821738687 -6.729140045734382 24.98245074906767 1.072828012647892 1.0429314216928418 0.07390527322165297 0.05744109972157596 583.1680223873411 451057.9737273903 0.009441091337948201 0.01965217036255933 1.865777941591113e-07 6.729140045734382 -0.02989659095505015 KAAVLS(ph)DS(ph)EDEEKASAK ddPTM_A549_MK2206_60min_R1 2 KAAVLSDSEDEEKASAK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KAAVLS(0.996)DS(0.994)EDEEKAS(0.01)AK;KAAVLS(0.999)DS(0.999)EDEEKAS(0.001)AK 49.089 0.0067732 9097000.0 3138.5 3229.3999999999996 2746.3 2231.5 3126.4 1884.21 2227.5 2260.8999999999996 3550.8 3856.6000000000004 4101.2 True False 3668.2020710420506 3393.7626661173454 3135.766635803607 2778.217600175841 2666.5107015170365 2083.5958515626266 2632.207916772976 2581.38949871586 2746.54946946244 2985.3913814749753 3082.7588526382315 1.189908859690013 1.1008848983477757 1.0171949171827084 0.9012114579764281 0.8649754421222506 0.6758867466326407 0.8538481414205743 0.8373634209197718 0.8909387988982457 0.9684154759364558 1.0 11.590006324379692 -5.831256284418133 1.7939526029261896 0.9047920495177408 1.179327556480224 0.610742051464797 0.08324285246096469 0.2671154481575959 1.5539372292299012 0.014366312442254817 0.08523568448910962 1.474835951132488e-06 5.831256284418133 0.2745355069624831 KAAVLS(ph)DS(ph)EDEEKASAK ddPTM_A549_PD325901_60min_R1 4 KAAVLSDSEDEEKASAK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KAAVLS(1)DS(0.991)EDEEKAS(0.009)AK;KAAVLS(1)DS(1)EDEEKASAK;KAAVLS(1)DS(0.999)EDEEKAS(0.001)AK;KAAVLS(1)DS(0.998)EDEEKAS(0.002)AK 78.975 0.00010483 32965900.0 6238.0 5859.8 6088.599999999999 6124.200000000001 7641.800000000001 7403.6 6616.9 7372.3 6406.1 6912.3 7676.299999999999 True False 6871.277167827111 6353.625910969888 6501.809009726101 6502.47792493266 7105.066330778823 7343.307536255754 6868.709750406616 7225.253693042534 6136.873894812836 6475.856198339501 6732.163764074953 1.0206639958009507 0.9437717402055683 0.9657829544227517 0.9658823155241748 1.0553911906739109 1.0907796948496804 1.020282629941404 1.0732438999180132 0.9115752542386475 0.9619279068784402 1.0 12.716854556211883 -8.768644156950975 24.999943048617652 0.9582438746973857 1.0149761936547503 0.23547636825696938 0.04735797452272786 212.24017429511943 736452.4249731065 0.009678758404800812 0.010409222504138341 1.703553758645534e-09 8.768644156950975 0.056732318957364636 KAAVLSDS(ph)EDEEKASAK ddPTM_A549_PD325901_60min_R1 1 KAAVLSDSEDEEKASAK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 KAAVLS(0.008)DS(0.992)EDEEKASAK 86.546 3.7289999999999998e-06 8940300.0 2541.9 2864.1 2985.1 3101.0 3392.0 3860.7 3493.0 3614.9 3557.9 3638.3 3176.2 True False 2799.9518167521214 3105.4677585598256 3187.6868368645337 3292.5417271180168 3153.7576217647356 3829.2597392110033 3625.92802644294 3542.7979836658087 3408.373835930533 3408.5771170838375 2785.547535590697 1.0051710771320117 1.1148500317734793 1.1443663395205927 1.1820088097759953 1.1321858921700134 1.3746883477251373 1.301693107051585 1.2718497668410929 1.223592055917926 1.2236650330079621 1.0 11.4437452205725 -4.186912031533957 16.242712208419405 1.1489226384896367 1.1482357510043781 0.0 0.11519981743094405 0.0 0.0 0.017767186348357958 0.0 6.502613906213854e-05 4.186912031533957 -0.0006868874852585805 KADDKS(ph)CPSTPSSGATVDSGK ddPTM_A549_PD325901_60min_R1 1 KADDKSCPSTPSSGATVDSGK 21 2 Q7RTP6;J3KRP8;J3QQT0 Q7RTP6;J3QQT0 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KADDKS(0.306)CPS(0.306)T(0.306)PS(0.04)S(0.04)GAT(0.004)VDSGK 47.745 0.0031072 3731300.0 582.39 588.85 908.8 808.27 854.06 965.14 718.25 804.08 747.54 610.56 959.3 True False 641.5138040671421 638.4744560692544 970.4766330583523 858.1950021856441 794.0737719470494 957.2802198311472 745.5833967914813 788.0419936114425 716.1234934403756 572.0091374011788 841.3121815037327 0.762515767833674 0.7589031397691959 1.1535273759185982 1.0200672485827265 0.943851508874802 1.1378418628387588 0.8862149071214575 0.9366820199880181 0.8511982937895904 0.6799011710240415 1.0 9.716497423235317 -5.6802124001537315 24.99928386030035 0.9580137888560843 0.7607019292686585 0.26878508636149145 0.12459047628309267 23.59614354857805 7260.265860691107 0.01367708939187449 0.05297114435635531 2.0882745698184582e-06 5.6802124001537315 -0.1973118595874258 KADEVLEILK ddPTM_A549_PD325901_60min_R1 1 KADEVLEILK 10 1 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 68.069 0.0036571 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KADFSAVGT(ph)IGR ddPTM_A549_PD325901_60min_R1 2 KADFSAVGTIGR 12 1 O60346;O60346-2 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 KADFSAVGT(1)IGR;KADFS(0.002)AVGT(0.998)IGR 74.12 0.0008353 10978600.0 2277.5 2041.58 2207.63 2380.73 2330.7 2790.6000000000004 2551.7 2681.3 2885.3 2586.5 2962.9 True False 2508.7101233931144 2213.631111525632 2357.453047357625 2527.782285069873 2166.999672478501 2767.8742788204804 2648.806339843816 2627.8193680608406 2764.0408749010285 2423.1879485851478 2598.482083370592 0.9654521535661192 0.851893929033463 0.9072423714000295 0.9727918854037232 0.8339482832483499 1.0651889026035397 1.0193667898636987 1.011290162390573 1.0637136552104618 0.932539794710432 1.0 11.343453396266899 -7.272603241327069 24.999829454670415 1.0305216742014507 0.9069952239233063 0.5133903562810092 0.05174089136840156 324.7397954474942 727206.2142439678 0.0063068592289433215 0.010138501136509678 5.338223572026337e-08 7.272603241327069 -0.12352645027814435 KADGYNQPDSK ddPTM_A549_MK2206_60min_R1 1 KADGYNQPDSK 11 1 O43390-4;O43390;O43390-2;B4DT28;O43390-3;O60506-2;O60506 O43390-4;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 55.452 0.017187 1842800.0 1255.1 1483.2 1322.1 1036.5 1276.4 951.77 1069.5 925.28 1508.6 1330.6 1574.6 False True 1466.930195751115 1558.6885447405864 1509.5936602687066 1290.4425465302531 1088.643250836856 1052.4856696662061 1263.8143061677665 1056.4412735511573 1166.904508739167 1030.0165358581655 1183.5833632507938 1.239397444487636 1.316923330570937 1.2754434602075708 1.0902844587017202 0.9197858677624715 0.8892366202034822 1.0677864740313794 0.8925786778968978 0.9859081708737295 0.8702526309842288 1.0 10.208945607560139 -6.404558733935757 3.062251064691746 0.9792131722739661 1.283334126405937 0.8369350015264698 0.06284002101159804 0.06544428308000845 1.1624971591371518 0.007452511077334281 0.01889236449019154 3.9395014626949455e-07 6.404558733935757 0.30412095413197093 KADGYNQPDSK ddPTM_A549_PD325901_60min_R1 2 KADGYNQPDSK 11 1 O43390-4;O43390;O43390-2;B4DT28;O43390-3;O60506-2;O60506 O43390-4;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 ; 85.258 0.00045001 7414800.0 2461.6000000000004 2677.7 2269.5 2477.8 3888.7 2696.6 2598.9 2976.7 3246.3 2833.6000000000004 3257.6 False True 2711.4998198658586 2903.3591763889663 2423.52191761216 2630.8480785079096 3615.571127286711 2674.639783654879 2697.802561672648 2917.327383324025 3109.869300312346 2654.6860124147997 2856.935851627812 0.9490937006236638 1.0162493409625222 0.8482941317115317 0.9208635458191743 1.2655415854810486 0.9361917531788243 0.9442993128933946 1.021138567623702 1.0885331214351273 0.9292074272168991 1.0 11.480252927664608 KADIDLTK ddPTM_A549_MK2206_60min_R1 1 KADIDLTK 8 1 P62269 P62269 RPS18 40S ribosomal protein S18 0 62.303000000000004 0.010533 3125200.0 2413.0 2771.0 3074.7 2804.0 3744.8 2946.1 2705.2 2565.3 4403.8 4084.6 3530.9 False True 2820.2554078140715 2912.0320641020503 3510.738693917401 3490.9801258763437 3193.9448807065633 3257.8543465370954 3196.6998233240192 2928.939130901763 3406.3463314235364 3161.8860231220983 2654.0800821175094 1.0626112704044643 1.0971907304992616 1.3227704459906207 1.3153258446863174 1.2034093855066847 1.2274890906599456 1.2044473883295905 1.103560947778547 1.2834376605192128 1.1913303010056295 1.0 11.37399618676837 -10.922587885647776 1.0825807821521287 0.9955023467445749 1.2106331531342538 0.025690836732309208 0.09947354275516934 0.40228276351807807 0.8079405573586816 0.06780831030961118 0.014680281376680624 1.1951216513852793e-11 10.922587885647776 0.21513080638967885 KADIDLTK ddPTM_A549_PD325901_60min_R1 1 KADIDLTK 8 1 P62269 P62269 RPS18 40S ribosomal protein S18 0 67.726 0.007954000000000001 4896400.0 5671.3 5726.9 5935.8 6503.3 8409.8 7997.1 6294.1 7368.7 7914.9 7191.5 7759.6 False True 6247.0462010096 6209.525961557301 6338.639082865058 6904.994070934085 7819.124660234984 7931.9742690300545 6533.625419763678 7221.725497866682 7582.264277806172 6737.427462690935 6805.21839215716 0.9179787981836351 0.9124653469921877 0.9314380108903157 1.0146616424377966 1.1489895268087684 1.1655723316934914 0.9600904839870406 1.0612040762996726 1.1141838278907459 0.9900383903117124 1.0 12.7324257459103 -6.346846850320988 3.421966428275454 1.062905514154295 0.9179799819033833 0.5068487478547161 0.06104725973300929 0.1606347577277011 3.588347049594603 0.00925218120322394 0.023541687509425896 4.499384933063253e-07 6.346846850320988 -0.14492553225091165 KADRDQS(ph)PFSK ddPTM_A549_MK2206_60min_R1 5 KADRDQSPFSK 11 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 KADRDQS(0.999)PFS(0.001)K;KADRDQS(1)PFSK;KADRDQS(0.998)PFS(0.002)K;KADRDQS(1)PFSK;KADRDQS(0.996)PFS(0.004)K 109.83 1.944e-05 777955400.0 18130.2 20581.6 19832.000000000004 16507.0 22545.9 16459.5 17413.4 17102.0 26754.3 26933.1 29713.6 True False 21190.134519167295 21629.115528878676 22644.47581154907 20551.215741027398 19229.427976373125 18201.23336506815 20577.18937729946 19526.26087267841 20694.493767837936 20848.89400414967 22334.893066358964 0.9487457341393806 0.9684002275997758 1.0138609459320136 0.9201394284704162 0.8609590347820684 0.8149236851499875 0.9213023458927155 0.8742491318254421 0.9265544144918333 0.9334673751159562 1.0 14.447011726959683 -10.233624800856338 0.9066081956434233 0.9949836140968866 0.9161938489224417 0.07380958450726605 0.054183963650521326 0.6025409192354728 0.9706423539096661 0.026395703083430127 0.010826221244279033 5.839493766057104e-11 10.233624800856338 -0.07878976517444491 KADRDQS(ph)PFSK ddPTM_A549_PD325901_60min_R1 4 KADRDQSPFSK 11 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 KADRDQS(0.993)PFS(0.007)K;KADRDQS(1)PFSK;KADRDQS(0.965)PFS(0.035)K;KADRDQS(1)PFSK 127.07 4.2069e-08 1444400000.0 28767.8 28473.800000000003 27505.299999999996 26893.699999999997 32138.199999999997 32043.699999999997 32290.9 32264.1 32109.1 29067.8 33223.8 True False 31688.285878264956 30873.38705480979 29371.97506080535 28554.86276897577 29880.923702771044 31782.74673125486 33519.747869758474 31620.56721480319 30759.666189403026 27232.454147258217 29137.483223020645 1.0875436850780922 1.05957631338652 1.008047772554338 0.9800044345084491 1.0255149174710818 1.0907855866612486 1.1503995596735526 1.0852195768857873 1.055673407135615 0.9346192990938448 1.0 14.830588648219013 -3.535090076508122 1.5843942950208765 1.0395499449489582 12.16736428375965 0.060800520355191234 0.05628928734823614 696.9738482094715 10.362373800032953 0.007557449412566118 27787.35352676584 0.00029168219766398775 3.535090076508122 11.12781433881069 KADRES(ph)RYEEEEEQSR ddPTM_A549_MK2206_60min_R1 2 KADRESRYEEEEEQSR 16 3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 KADRES(1)RYEEEEEQSR;KADRES(1)RYEEEEEQSR 171.07 1.6078e-28 116189000.0 3311.1 3216.9 3655.3 2710.3 4121.700000000001 3442.9 3655.8999999999996 3621.6 5408.0 4875.5 5782.8 True False 3869.9327313771946 3380.6264695091613 4173.676504334171 3374.323621669992 3515.4033899829733 3807.225392787943 4320.129707263893 4134.972890684842 4183.0966348014135 3774.121163818192 4346.771162839259 0.8903005441053402 0.7777327912751166 0.9601785665680121 0.7762827844532594 0.8087390061009685 0.8758743559670412 0.9938709781174759 0.9512745750305216 0.9623457223980166 0.8682585354580712 1.0 12.085728431134529 -7.6613117426273964 4.224499179506455 0.9797740372528613 0.8419407386250204 0.41797054589684046 0.06046849619749616 0.10163077303988656 3.3063456238685744 0.007312578628137761 0.010933326898489379 2.1811636801127944e-08 7.6613117426273964 -0.13783329862784088 KADRES(ph)RYEEEEEQSR ddPTM_A549_PD325901_60min_R1 2 KADRESRYEEEEEQSR 16 3 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 KADRES(1)RYEEEEEQSR;KADRES(1)RYEEEEEQSR 128.38 1.6306999999999999e-10 170525000.0 3242.9 3588.7999999999997 3759.5 3532.8999999999996 3885.2 3277.8 3272.6 3676.1 3416.7 3852.8 3849.1 True False 3572.116820703196 3891.240770894695 4014.6422777100315 3751.119209201949 3612.316955212367 3251.1066835511256 3397.140583835433 3602.7773016553383 3273.1079808943064 3609.533550477039 3375.685101455244 1.0581901786879562 1.1527262330296144 1.1892822218456738 1.111217159321187 1.0700989122637985 0.963095367559488 1.0063558897632185 1.0672729219032295 0.9696129474527357 1.069274367126538 1.0 11.720964614134347 -6.9648164593773245 2.5620295770460166 0.9924857930650258 1.1353736375848866 0.5585953404146666 0.04577483195546883 0.11008080750892586 1.461129422632425 0.005926176914516262 0.011841505467078862 1.084385097750741e-07 6.9648164593773245 0.1428878445198608 KADS(ph)DS(ph)EDKGEESKPK ddPTM_A549_MK2206_60min_R1 1 KADSDSEDKGEESKPK 16 3 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 CBX1 Chromobox protein homolog 1 2 KADS(1)DS(0.999)EDKGEES(0.002)KPK 56.148999999999994 0.0036762 6304200.0 1247.4 1272.4 991.88 1092.8 1128.4 559.77 841.56 889.71 1280.7 1673.2 1718.2 True False 1457.9306239980424 1337.1597251401852 1132.5434987877813 1360.5360490576563 962.4138547824415 619.0044898547469 994.4605586709159 1015.8291171226008 990.6234948576507 1295.2229579121317 1291.5235200924142 1.1288455853236967 1.0353351714760142 0.8769050514130342 1.0534349765154134 0.7451771801365077 0.47928239805532497 0.7699902814001853 0.7865355150867974 0.767019322100125 1.002864398334343 1.0 10.33485820145266 -5.684266886848631 1.1561420208604023 0.8381586837799525 1.1633431476525828 0.3175137385930793 0.14901203932511808 0.9699623636420622 1.6654157325835899 0.024827963020699322 0.3158368354510415 2.068869576303118e-06 5.684266886848631 0.32518446387263034 KADS(ph)DS(ph)EDKGEESKPK ddPTM_A549_PD325901_60min_R1 2 KADSDSEDKGEESKPK 16 3 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 CBX1 Chromobox protein homolog 1 2 KADS(1)DS(0.997)EDKGEES(0.003)KPK;KADS(1)DS(1)EDKGEESKPK 66.827 0.00081025 21480000.0 3321.3 3392.0 3239.9 3145.5 4260.4 3336.7 3344.5 3629.6 3555.4 3658.7000000000003 4720.6 True False 3658.475930988167 3677.8557442250344 3459.7790971014056 3339.790391051184 3961.1642015820994 3309.527021479359 3471.776777680622 3557.2047806338833 3405.978902236548 3427.6890576023507 4139.996126348922 0.8836906652409335 0.8883717839293123 0.8356962160137569 0.8067134096563896 0.9568038424894529 0.7994034101664832 0.8385942092033779 0.8592290118326742 0.8227009877036512 0.827944991490908 1.0 12.015413702507505 -10.798275608071313 0.9550043198249852 1.003398542241773 0.852965791145823 0.0 0.06540130164151235 0.2979536739923529 0.4644875782192888 0.03167458345340618 0.007235402873172241 1.591198614368779e-11 10.798275608071313 -0.15043275109595 KADS(ph)DSEDKGEESKPK ddPTM_A549_MK2206_60min_R1 8 KADSDSEDKGEESKPK 16 3 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 CBX1 Chromobox protein homolog 1 1 KADS(0.871)DS(0.127)EDKGEES(0.002)KPK;KADS(0.984)DS(0.016)EDKGEESKPK;KADS(0.996)DS(0.004)EDKGEESKPK;KADS(0.901)DS(0.099)EDKGEESKPK;KADS(0.991)DS(0.008)EDKGEESKPK;KADS(0.989)DS(0.011)EDKGEESKPK;KADS(0.98)DS(0.019)EDKGEES(0.001)KPK;KADS(0.989)DS(0.011)EDKGEESKPK 181.85 1.7018e-34 7420353000.0 70461.45999999999 83882.11 70994.32 73304.07999999999 53961.09 32998.399999999994 27364.74 32083.1 57445.899999999994 113719.5 106074.20000000001 True False 82353.63183069834 88151.35110953984 81062.38210958912 91263.5828907453 46023.485142823665 36490.26878543484 32336.559043068082 36630.97767537299 44434.495372251986 88030.18596837719 79733.04864101189 1.0328669633778247 1.1055810935617214 1.0166723020282642 1.1446142402211184 0.5772196840238565 0.4576555068115823 0.40556029895030615 0.45942025671562364 0.5572908113963227 1.1040614584389232 1.0 16.28289021201923 -6.757351320891545 24.999698961428848 0.6933353396920203 1.0729612740736234 0.4709273451090228 0.21294049408333007 91.52112301997536 559671.0366523542 0.03510343672402805 0.0710321703905829 1.7484317291020523e-07 6.757351320891545 0.3796259343816031 KADS(ph)DSEDKGEESKPK ddPTM_A549_PD325901_60min_R1 7 KADSDSEDKGEESKPK 16 3 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 CBX1 Chromobox protein homolog 1 1 KADS(0.981)DS(0.019)EDKGEESKPK;KADS(0.831)DS(0.169)EDKGEESKPK;KADS(1)DSEDKGEESKPK;KADS(0.981)DS(0.019)EDKGEESKPK;KADS(0.725)DS(0.275)EDKGEESKPK;KADS(1)DSEDKGEESKPK;KADS(0.998)DS(0.002)EDKGEESKPK 211.06 1.052e-46 16016401300.0 94697.5 101082.80000000002 99803.40000000001 109112.7 111365.0 104259.90000000001 103512.90000000001 109054.6 121887.1 112204.6 113828.1 True False 104311.12048738486 109601.40230611752 106576.65889059866 115852.34366607878 103543.10658839312 103410.84194165973 107452.1400539324 106879.42045132151 116764.60906080804 105119.98240704306 99827.96531577704 1.0449088104463178 1.0979027966705024 1.067603236763106 1.1605199334636667 1.0372154361842827 1.0358905103850338 1.076373135664325 1.0706360698952364 1.1696583085857435 1.05301136885367 1.0 16.60715640123199 KADS(ph)EEERDDVSTLGSMLPAK ddPTM_A549_MK2206_60min_R1 1 KADSEEERDDVSTLGSMLPAK 21 2 J3KQH6;P78364;H0YGZ1;H0YGK7 J3KQH6 PHC1 Polyhomeotic-like protein 1 1 KADS(0.733)EEERDDVS(0.133)T(0.133)LGS(0.002)MLPAK 66.85300000000001 0.00024239999999999998 3401200.0 989.96 1134.4 1100.8 1211.3 1501.1 1209.1 953.68 1241.9 1523.1 1512.4 1665.1 True False 1157.0410458017482 1192.1361145858425 1256.9099926055471 1508.0685543773236 1280.2901784951457 1337.0461594643768 1126.9513113661285 1417.9431281592406 1178.1202818909094 1170.7477895925815 1251.6097155778596 0.9244423652204955 0.9524823111775235 1.0042347682042725 1.2049032023381656 1.02291486120659 1.068261250151028 0.9004015367888246 1.132895590782935 0.9412840658135826 0.9353936574805632 1.0 10.289569047268225 KADSDSEDKGEESKPK ddPTM_A549_PD325901_60min_R1 1 KADSDSEDKGEESKPK 16 3 C9JWS9;K7ELA4;B5MD17;J3KS05;P83916 C9JWS9 CBX1 Chromobox protein homolog 1 0 96.303 1.421e-06 17365000.0 1794.0 2116.4 1956.8 2167.6 1891.8 2639.8 1966.1 2122.2 2550.6 2488.1 2309.4 False True 1976.1255593270018 2294.7564555064455 2089.6002151943035 2301.4877290232225 1758.9264943556975 2618.3023440229 2040.9210113912025 2079.871056166307 2443.4071519504246 2331.0009413781972 2025.3584404927751 0.9756917688338689 1.1330125125645045 1.0317187187300527 1.136336009967334 0.8684519535849398 1.2927599834555012 1.0076838600947302 1.026915046040082 1.2064072724608377 1.150907856493322 1.0 10.983961538120907 -7.247683749358163 24.993695542884605 1.098583474650374 1.040927811743758 0.1217374366780184 0.10738923954928273 2038.3793723724634 3703690.8812809964 0.01649695687629732 0.028482307528398126 5.653485083553358e-08 7.247683749358163 -0.057655662906616056 KADSEEERDDVSTLGSMLPAKAS(ph)PVAESPK ddPTM_A549_PD325901_60min_R1 1 KADSEEERDDVSTLGSMLPAKASPVAESPK 30 3 J3KQH6;P78364;H0YGZ1;H0YGK7 J3KQH6 PHC1 Polyhomeotic-like protein 1 1 KADSEEERDDVSTLGS(0.001)MLPAKAS(0.979)PVAES(0.021)PK 71.47 3.2111e-05 4798000.0 1019.4 1070.1 1115.1 1115.3 1514.2 1287.4 1244.3 1525.5 1146.8 956.04 1279.6 True False 1122.8887375573834 1160.281082516276 1190.7773916410301 1184.1895479699215 1407.8478157064167 1276.9158412361094 1291.6525174070866 1495.072705768401 1098.603984104425 895.6754712411928 1122.2173120527223 1.0005983025724607 1.0339183597104993 1.0610934075352128 1.0552230261034217 1.2545233446196162 1.1378507776719446 1.1509825267660851 1.332248834259796 0.9789583285744323 0.798130149679168 1.0 10.132136358704587 KADSLSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KADSLSSPR 9 1 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 KADS(0.003)LS(0.076)S(0.921)PR;KADS(0.001)LS(0.062)S(0.937)PR 90.65299999999999 0.00046782 13217000.0 5195.7 5070.1 5236.8 5593.2 6064.1 5840.8 4816.8 5620.4 5628.4 5072.3 6485.5 True False 5723.163639127817 5497.375120517498 5592.200739436596 5938.679260921152 5638.178536009295 5793.23446131107 5000.105959854099 5508.296712881498 5391.857921288238 4752.034112355867 5687.824614971809 1.0062131001829746 0.9665162856897873 0.9831879704441825 1.0441037941446065 0.9912715172630618 1.0185325416085784 0.879089335260539 0.9684364560718438 0.9479648699250481 0.8354747964357583 1.0 12.473661264561144 KADSSSSEEESS(ph)SSEEEK ddPTM_A549_MK2206_60min_R1 1 KADSSSSEEESSSSEEEK 18 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 KADSSSSEEES(0.086)S(0.735)S(0.086)S(0.093)EEEK 72.015 0.00035863 2220800.0 574.65 556.94 577.08 368.12 426.77 300.67 116.21 143.97 353.69 735.2 668.14 True False 671.636871156385 585.2858671169245 658.9186214869268 458.30941652553486 363.99269833880066 332.4866998314068 137.32385275339513 164.37818838963352 273.57977972686984 569.1178093814242 502.2223982740924 1.337329584392278 1.1653918047627565 1.3120056448125914 0.9125626776116192 0.7247639682930834 0.6620308074152224 0.27343235432213714 0.32730158781154683 0.5447383085004528 1.1331987807338353 1.0 8.972182561590778 -6.468391936490258 2.5106063433992807 0.6923463821137907 1.2659233609582552 0.5431968010715158 0.24169622740536129 0.19953909296355932 2.469121471317798 0.038896369357464496 0.10001389260122766 3.4010112108296817e-07 6.468391936490258 0.5735769788444645 KADT(ph)EEEFLAFR ddPTM_A549_MK2206_60min_R1 2 KADTEEEFLAFR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KADT(1)EEEFLAFR;KADT(1)EEEFLAFR 125.5 2.3011000000000003e-06 6485500.0 1364.3200000000002 1612.86 998.84 1420.04 2195.09 1603.91 1496.63 1434.6100000000001 2482.8199999999997 2517.12 2498.2599999999998 True False 1594.5838615784896 1694.9476849179487 1140.4905314445175 1767.9498637480183 1872.1951688181407 1773.6346916107086 1768.5482983074935 1637.9703608088641 1920.465234248826 1948.500843784237 1877.8730935316453 0.8491435694302514 0.902589046488932 0.6073309934377088 0.9414639731714253 0.9969764065883566 0.9444912426297671 0.9417826499561007 0.8722476329475465 1.022681053828339 1.0376105022729543 1.0 10.874883853767233 -6.502457538762847 24.35386607152302 0.9883650954059973 0.7940478718427688 0.5050844473471441 0.08037991620858918 311.80775810078876 371854.26887527434 0.010960366425136226 0.025173422642597008 3.1444338384501467e-07 6.502457538762847 -0.19431722356322845 KADT(ph)EEEFLAFR ddPTM_A549_PD325901_60min_R1 2 KADTEEEFLAFR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KADT(1)EEEFLAFR;KADT(1)EEEFLAFR 147.24 3.7169e-12 11073400.0 2869.3 3145.5 3331.5 2981.3999999999996 3362.8 3385.1 3832.8999999999996 3670.0 4477.5 4220.1 4211.3 True False 3160.589223732982 3410.582324133208 3557.595623936951 3165.554306749327 3126.608529030207 3357.5328679263266 3978.7631069433587 3596.798970940696 4289.326245925676 3953.642165793227 3693.3367976302175 0.8557544022957597 0.9234420013689423 0.9632470091055971 0.8570987375915635 0.8465538618184931 0.9090784436666174 1.077281419202354 0.9738616237892348 1.161368832833731 1.0704797267148858 1.0 11.850709113443262 -7.735174930713629 5.735557958539716 1.06907861162622 0.8923968329443076 0.6863193754713768 0.0549827441428617 0.09347061225086477 8.856833024547434 0.01079682415044059 0.015818433903705836 1.8400307009671212e-08 7.735174930713629 -0.17668177868191248 KADTTTPTPTAILAPGS(ph)PASPPGSLEPK ddPTM_A549_MK2206_60min_R1 3 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHL0;A0A140T9V2;A0A140T9F7;U3KQA6;E9PIQ3;H0YDJ7;U3KPW0 P25440-2 BRD2 Bromodomain-containing protein 2 1 KADTTTPTPTAILAPGS(0.984)PAS(0.016)PPGS(0.001)LEPK;KADTTTPTPTAILAPGS(0.794)PAS(0.203)PPGS(0.002)LEPK;KADTTTPTPTAILAPGS(0.918)PAS(0.082)PPGS(0.001)LEPK 114.91 1.226e-20 39116200.0 1850.0300000000002 2756.19 3050.64 2536.13 3118.06 1890.6100000000001 2902.9 2778.01 3664.3599999999997 4022.0099999999998 4093.8 True False 2162.2698351091053 2896.468298360678 3483.2666241298934 3157.4819638512017 2659.397504469106 2090.6730953146507 3430.3193542537715 3171.80142479882 2834.3883107804945 3113.4351475927415 3077.196476867843 0.7026752602128268 0.9412685605661679 1.1319610724614417 1.0260904650017921 0.8642273980425201 0.6794083871572166 1.1147547386201866 1.030743876330988 0.9210943571810879 1.0117765215829781 1.0 11.587400846355466 KADTTTPTPTAILAPGS(ph)PASPPGSLEPK ddPTM_A549_PD325901_60min_R1 2 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHL0;A0A140T9V2;A0A140T9F7;U3KQA6;E9PIQ3;H0YDJ7;U3KPW0 P25440-2 BRD2 Bromodomain-containing protein 2 1 KADTTTPTPTAILAPGS(0.993)PAS(0.007)PPGSLEPK;KADTTTPTPTAILAPGS(0.992)PAS(0.008)PPGSLEPK 134.03 1.2457e-27 25858000.0 1699.9 1860.13 2029.5299999999997 2023.4299999999998 2336.24 2473.3999999999996 2609.4 2068.8 1914.37 2388.8 3035.7 True False 1872.4725965997616 2016.8896832268017 2167.266110355323 2148.412675557051 2172.150561990461 2453.2574504531563 2708.702144918468 2027.5361610577957 1833.915686301001 2237.9707603248426 2662.3281448878142 0.7033214895749315 0.7575661501755975 0.8140492052104447 0.8069676458487732 0.8158838594563975 0.9214707267261122 1.0174185891095735 0.761565085412577 0.6888390861293617 0.8406066564792849 1.0 11.378472686049351 -5.514733971022502 0.8511353641976017 0.8579531643085223 0.6516665907374217 0.2417819486431091 0.09071718098749447 2.688534012954754 1.79520229926164 0.019634887336802357 0.47467633353853195 3.0567929917115612e-06 5.514733971022502 -0.20628657357110058 KADTTTPTPTAILAPGSPAS(ph)PPGSLEPK ddPTM_A549_MK2206_60min_R1 1 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHL0;A0A140T9V2;A0A140T9F7;U3KQA6;E9PIQ3;H0YDJ7;U3KPW0 P25440-2 BRD2 Bromodomain-containing protein 2 1 KADTTTPTPTAILAPGS(0.288)PAS(0.702)PPGS(0.009)LEPK 96.686 2.7770999999999996e-10 19435000.0 891.63 1031.2 1109.4 1225.4 1213.6 965.76 1076.8 725.97 1725.4 1352.9 1446.1 True False 1042.1153457394378 1083.683675388681 1266.7296019227779 1525.623055010296 1035.0810476461988 1067.956082180396 1272.4406216750356 828.8784706898814 1334.5996548976261 1047.2789503701435 1086.993459670376 0.9587135382171046 0.996955101935297 1.1653516317447814 1.4035255147468242 0.9522422038860111 0.9824862078786075 1.1706055913720907 0.7625422796391375 1.2277899586464256 0.9634638930465362 1.0 10.08612754450339 -4.177346377714259 15.86294881445622 1.0839874487339443 1.0846710595447218 0.0 0.16861491350921537 0.0 0.0 0.02148970950061868 0.0 6.647427697115581e-05 4.177346377714259 0.0006836108107775019 KADTTTPTPTAILAPGSPAS(ph)PPGSLEPK ddPTM_A549_PD325901_60min_R1 2 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHL0;A0A140T9V2;A0A140T9F7;U3KQA6;E9PIQ3;H0YDJ7;U3KPW0 P25440-2 BRD2 Bromodomain-containing protein 2 1 KADTTTPTPTAILAPGS(0.019)PAS(0.976)PPGS(0.004)LEPK;KADTTTPTPTAILAPGS(0.104)PAS(0.893)PPGS(0.003)LEPK 115.44 1.173e-20 42424000.0 2486.98 2715.3 3106.61 2841.3 3324.3999999999996 3328.8 3114.0 4276.7 3513.5 3208.3 3646.1 True False 2739.456378782088 2944.1278603461806 3317.443236163519 3016.8006479395103 3090.9056125573948 3301.6913564601236 3232.5049740461855 4191.397863493753 3365.8398135253733 3005.7273904680965 3197.652814532222 0.856708510171026 0.9207152968471567 1.0374619849556186 0.9434422130599041 0.9666170131135882 1.0325359092941806 1.0108992944310817 1.310773278589003 1.0525970168583656 0.9399792800544541 1.0 11.642797591227879 -7.241096854320999 2.055448135511153 1.0499903816945078 0.9442149500945882 0.2587126949038826 0.09580220092085343 0.41090181889072974 3.3853784145817256 0.014728745123160069 0.02717396767879131 5.7398843971926476e-08 7.241096854320999 -0.10577543159991953 KADVSEQVSNGPVESVT(ph)LENSPLVWK ddPTM_A549_PD325901_60min_R1 1 KADVSEQVSNGPVESVTLENSPLVWK 26 1 F5GYK2;Q9NRL3;Q9NRL3-3;M0R2A7;M0QYS2;M0R0P4;Q9NRL3-2;M0QXN2;M0R0W8 F5GYK2 STRN4 Striatin-4 1 KADVSEQVSNGPVES(0.083)VT(0.518)LENS(0.399)PLVWK 114.03 3.9169e-17 3396300.0 899.73 930.33 949.24 1120.4 864.62 1073.1 984.51 1026.7 1245.3 974.59 1181.9 True False 991.0699272537813 1008.7321740934188 1013.6611346438268 1189.6045633869808 803.8920739770714 1064.3610293851712 1021.9760667945438 1006.2216630694309 1192.9643716474025 913.0542210754302 1036.5337926813943 0.9561385593517379 0.9731782805497775 0.9779335143735174 1.1476756202126415 0.7755579988352281 1.0268464346268837 0.9859553774419729 0.9707562552943407 1.1509170082736426 0.8808726039828025 1.0 10.017551436072416 -8.725255919895716 24.922595555193528 1.0712663879563424 0.9776423976689982 0.0 0.1046389103447333 211.80698368659273 145889.141377833 0.015444112975381006 0.017511704424883083 1.8825394247529888e-09 8.725255919895716 -0.09362399028734425 KAEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEK ddPTM_A549_MK2206_60min_R1 2 KAEAAAAPTVAPGPAQPGHVSPTPATTSPGEK 32 1 Q9Y6R0;A0A0C4DGH3;M0QYC2 Q9Y6R0 NUMBL Numb-like protein 1 KAEAAAAPTVAPGPAQPGHVS(0.94)PT(0.053)PAT(0.004)T(0.002)S(0.001)PGEK;KAEAAAAPTVAPGPAQPGHVS(0.93)PT(0.044)PAT(0.01)T(0.012)S(0.004)PGEK 87.686 2.8184000000000005e-09 7194300.0 833.05 1025.2 571.09 372.88 751.27 777.47 832.96 890.73 1214.06 1378.1100000000001 1181.78 True False 973.648473882931 1077.3783010167529 652.0791494159716 464.23561673921927 640.7591782013515 859.7413593571816 984.2980499911192 1016.9937052462195 939.0773484554371 1066.793993861038 888.3114105312619 1.0960666072054985 1.2128385251433593 0.7340659386847124 0.5226045857742381 0.7213226922506153 0.967837797831513 1.1080551688539628 1.1448616928583615 1.05714880763922 1.2009234388006262 1.0 9.794921712826204 -7.512499183836644 18.09984153448751 1.0436564735776452 0.8509677571188431 0.26359175912322896 0.18353366471900623 17.5994686499912 30688.42411396488 0.029177822408744312 0.04490874404059307 3.072563139485615e-08 7.512499183836644 -0.19268871645880215 KAEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEK ddPTM_A549_PD325901_60min_R1 2 KAEAAAAPTVAPGPAQPGHVSPTPATTSPGEK 32 1 Q9Y6R0;A0A0C4DGH3;M0QYC2 Q9Y6R0 NUMBL Numb-like protein 1 KAEAAAAPTVAPGPAQPGHVS(0.936)PT(0.058)PAT(0.004)T(0.001)SPGEK;KAEAAAAPTVAPGPAQPGHVS(0.741)PT(0.231)PAT(0.022)T(0.005)S(0.001)PGEK 96.59700000000001 8.161499999999999e-10 9926000.0 751.95 1200.08 1132.67 1024.19 913.3299999999999 1017.79 1217.6799999999998 1072.25 1030.1100000000001 1126.85 1191.58 True False 828.2874104436675 1301.2149532811259 1209.5397974980244 1087.451890195744 849.1808516174484 1009.5014556871994 1264.0194787400635 1050.8631325861475 986.81805900402 1055.700498690576 1045.0232140479693 0.7926019243488757 1.2451541131232675 1.1574286400900022 1.040600702048928 0.8125952038214423 0.9660086418337311 1.2095611482579387 1.0055883146514581 0.9443025243252849 1.0102172702951235 1.0 10.029319275216954 -6.527503530871554 24.973956755662986 0.9817233248528789 1.0857281446343838 0.04544557556499862 0.13496050724963277 211.7618040724412 1143518.205615536 0.018296772008259004 0.038199471196806764 2.9682226113228974e-07 6.527503530871554 0.10400481978150489 KAEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEKGEAGTPVAAGTTAAAIPR ddPTM_A549_MK2206_60min_R1 2 KAEAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR 50 2 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 KAEAAAAPTVAPGPAQPGHVS(0.958)PT(0.039)PAT(0.002)T(0.002)SPGEKGEAGTPVAAGTTAAAIPR;KAEAAAAPTVAPGPAQPGHVS(0.927)PT(0.042)PAT(0.01)T(0.01)S(0.01)PGEKGEAGTPVAAGTTAAAIPR 173.02 4.0033999999999996e-69 94804000.0 1113.96 1333.44 1555.22 1126.18 1633.65 1157.26 1348.6799999999998 1383.81 1978.12 1931.9499999999998 2417.94 True False 1301.9692142928156 1401.306400417265 1775.7735816678767 1402.094150556142 1393.3422490830696 1279.7204850729831 1593.7176984033124 1579.9693052403884 1530.0789784085384 1495.5211532024523 1817.4987662508734 0.7163521860201923 0.7710081714706593 0.9770425238477234 0.7714415968756745 0.7666262420399044 0.704110786117772 0.8768741569441748 0.869309698899846 0.8418597067687573 0.8228457597731443 1.0 10.827738669481317 -10.6304297324855 0.3460919814212608 1.0671071798212397 0.7905988943814142 0.06687165737336875 0.08935938757807986 1.8268297531689754 0.28952447954301236 0.1922690304093817 0.02951750223004866 2.3419103584270367e-11 10.6304297324855 -0.27650828543982553 KAEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEKGEAGTPVAAGTTAAAIPR ddPTM_A549_PD325901_60min_R1 1 KAEAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR 50 2 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 KAEAAAAPTVAPGPAQPGHVS(0.974)PT(0.021)PAT(0.004)T(0.001)SPGEKGEAGTPVAAGTTAAAIPR 228.97 6.955999999999997e-141 94122000.0 1003.9 826.63 1361.5 1432.5 1450.8 1465.8 1846.4 1543.2 1990.4 1213.4 1472.1 True False 1105.8151889678802 896.293011158237 1453.8995773645984 1520.9822715564535 1348.9008129882905 1453.863010784442 1916.6657623888486 1512.4196653830202 1906.7504098024485 1136.7857169198605 1291.041032410763 0.8565298555251879 0.6942405304381285 1.126145134713286 1.1781052912906425 1.044816376184021 1.1261168113840978 1.4845893463276343 1.1714729643866366 1.4769092243659914 0.8805186577200717 1.0 10.334319138378296 -5.86834840202906 4.395402948106401 1.2199002397630772 0.7765004369085159 0.38942507494649603 0.1805594787958671 0.14127680547564275 4.720512233395601 0.026651916099487312 0.09049611793368562 1.3541026810530717e-06 5.86834840202906 -0.44339980285456126 KAEAAAS(ph)ALADADADLEER ddPTM_A549_PD325901_60min_R1 2 KAEAAASALADADADLEER 19 1 M0R1T5;O43633 M0R1T5 CHMP2A Charged multivesicular body protein 2a 1 KAEAAAS(1)ALADADADLEER;KAEAAAS(1)ALADADADLEER 87.95200000000001 2.7049e-06 3292000.0 1103.78 1337.65 986.6300000000001 1449.38 1212.03 980.36 1082.92 1121.42 1452.14 1601.24 1369.1100000000001 True False 1215.8349330401109 1450.378459983084 1053.588644888163 1538.9049108191919 1126.9011940765076 972.3762731973221 1124.1311131965615 1099.0523983630283 1391.1116057528777 1500.1374331306724 1200.7181495033624 1.0125897851573253 1.20792582387714 0.8774654112823607 1.2816537431833686 0.9385226620773687 0.8098289124716851 0.9362156419985168 0.9153292126196436 1.1585663182723318 1.2493668341326856 1.0 10.229681824519536 KAEAGAGS(ph)ATEFQFR ddPTM_A549_MK2206_60min_R1 2 KAEAGAGSATEFQFR 15 1 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 KAEAGAGS(0.713)AT(0.287)EFQFR;KAEAGAGS(0.652)AT(0.348)EFQFR 148.91 3.2263e-14 76033000.0 6628.3 7107.2 7756.2 7095.0 9754.8 8025.9 8512.1 8418.0 11785.9 10871.099999999999 12067.4 True False 7746.994993623712 7468.926122694367 8856.14578910532 8833.275318506654 8319.881842105418 8875.19541083876 10058.63838759293 9611.27727904379 9116.412468214863 8415.310959693146 9070.731536703057 0.8540650731726447 0.823409456279543 0.9763430604544456 0.9738217124786926 0.9172228070515082 0.9784431801257599 1.1089114860132823 1.0595922986093804 1.005036080202238 0.9277433606806825 1.0 13.14700319063256 -5.763415058727487 0.7658260929485693 1.011722109557648 0.7845578272723884 0.5376583212971324 0.05381007863167932 0.7625954086363466 0.47662155072244217 0.008009926199280579 0.12701051522688747 1.7241892827634874e-06 5.763415058727487 -0.22716428228525964 KAEAGAGS(ph)ATEFQFR ddPTM_A549_PD325901_60min_R1 2 KAEAGAGSATEFQFR 15 1 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 KAEAGAGS(0.5)AT(0.5)EFQFR;KAEAGAGS(0.761)AT(0.239)EFQFR 171.3 1.2927e-27 153922000.0 16093.5 16007.4 15290.7 16204.0 18221.4 16818.7 17210.9 17567.2 17099.4 16270.1 18188.1 True False 17727.300272591474 17356.39977597519 16328.418852448664 17204.8842780459 16941.591724417452 16681.73408342222 17865.87021766586 17216.808414798197 16380.771682765273 15242.803109327358 15951.079003865361 1.1113543020065093 1.0881019253787962 1.0236560704446303 1.078603163703014 1.062096910203508 1.0458059971604305 1.1200414851770526 1.0793507079129956 1.0269381575250043 0.9555969916288191 1.0 13.961366397324811 -8.903121110669069 3.019103300040809 1.0109305329288572 1.07487300049773 0.570877683633074 0.030881677740277544 0.14102245035594838 2.4576380075907847 0.004906185593148649 0.005111294547851241 1.2499104220661004e-09 8.903121110669069 0.0639424675688729 KAEAGAGSATEFQFR ddPTM_A549_MK2206_60min_R1 1 KAEAGAGSATEFQFR 15 1 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 86.005 8.546899999999999e-05 3691100.0 2063.0 2241.1 1876.8 1619.7 2372.8 2017.5 1756.0 1507.7 2730.0 2913.5 3254.8 False True 2411.1839644925117 2355.16241748795 2142.9584612300955 2016.5265727110957 2023.7642632291543 2230.9905108918865 2075.0424699678324 1721.4210921376002 2111.6593589141753 2255.3383264863714 2446.5433320898555 0.9855472138451193 0.9626489695059488 0.875912734968632 0.8242349711372428 0.8271933043999837 0.9118949505734516 0.8481527560745534 0.7036135716701775 0.8631195414431431 0.9218468755098013 1.0 11.256529120033704 -10.486390747247667 1.017116216425852 0.9933415361432378 0.8655777153660777 0.16819897217497437 0.07444430164579657 0.47990489133341707 0.9487231107998654 0.038747532213755875 0.013697660210155766 3.2629412384677996e-11 10.486390747247667 -0.1277638207771601 KAEAGAGSATEFQFR ddPTM_A549_PD325901_60min_R1 1 KAEAGAGSATEFQFR 15 1 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 153.72 4.2193000000000005e-15 7357900.0 2976.2 2895.0 3086.9 3082.7 3169.2 3283.9 3080.1 3285.6 3565.9 3589.1 3546.8 False True 3278.34163303736 3138.9718100033842 3296.395597037662 3273.1113776803345 2946.606325146462 3257.1570071735764 3197.31489099539 3220.066130496661 3416.0376237512833 3362.4836134803613 3110.566085017657 1.053937303832833 1.0091320114118605 1.0597413804886098 1.0522558557574433 0.9472894144056534 1.0471267666878994 1.0278884304678713 1.0352026102279008 1.09820448445219 1.080987679276801 1.0 11.602961441779883 -8.531018632972673 24.89795094959912 1.04744429420154 1.0275267789222267 0.09578920207982822 0.03748967460151141 518.5046062058028 1585968.6401746066 0.007479144947127227 0.008487418317613729 2.9442953090278633e-09 8.531018632972673 -0.019917515279313402 KAEDS(ph)DS(ph)EPEPEDNVR ddPTM_A549_MK2206_60min_R1 4 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR 167.89 1.7915999999999998e-28 196300000.0 17979.6 20661.600000000002 18088.4 17072.2 25297.2 20671.999999999996 18673.9 18465.5 25971.199999999997 28480.2 29265.7 True False 21014.116920983794 21713.187187171046 20653.607113232356 21254.88976640019 21576.015390998204 22859.497319036953 22066.705911123172 21083.041173222056 20088.764667484185 22046.50303964207 21998.21899777008 0.9552644658694396 0.9870429596765117 0.9388763297304193 0.9662095721728545 0.9808073732325933 1.03915218415428 1.0031132935516296 0.9583976400707351 0.9131995944544669 1.0021949068639096 1.0 14.42509910570417 -4.857582538724173 13.168635578904416 0.9679888074092602 0.00025594400358271987 0.0 0.03433081865649239 648964.5044734279 426574.30853287125 0.0055934587160805915 18659018.376099214 1.3880894750726614e-05 4.857582538724173 -0.9677328634056774 KAEDS(ph)DS(ph)EPEPEDNVR ddPTM_A549_PD325901_60min_R1 4 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR 169.64 1.0245999999999998e-27 589713000.0 48724.3 49011.7 51972.5 51041.3 59610.799999999996 52246.9 54000.9 56556.7 54159.0 57102.200000000004 60127.0 True False 53670.75506706617 53142.0879655761 55499.666386031284 54194.00517779715 55423.94305409588 51821.41856880449 56055.93379992633 55428.63225062717 51882.88557299578 53496.7573468776 52731.76017645674 1.0178070082900186 1.007781416507742 1.0524903056585306 1.0277298727834476 1.0510542957153386 0.9827363697967607 1.0630393070958732 1.0511432211848393 0.9839020241194233 1.0145073323526648 1.0 15.686384533966084 -8.771577575056206 24.999746331495125 0.9923981758185343 1.0315392324875505 0.262174295658559 0.02328554763543885 147.43269058270954 363553.0975030361 0.0037612273065839087 0.0040266377925759446 1.6920859716839593e-09 8.771577575056206 0.03914105666901624 KAEDS(ph)DSEPEPEDNVR ddPTM_A549_MK2206_60min_R1 1 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 KAEDS(0.5)DS(0.5)EPEPEDNVR 150.28 7.7944e-15 13550000.0 370.06 642.16 470.68 466.93 868.33 788.36 459.6 577.3 1158.2 827.66 699.45 True False 432.5170809016477 674.8432011128737 537.4295015621169 581.3278709612841 740.599807269796 871.783731928985 543.1033708412392 659.1340429071016 895.8695492653476 640.6910311651653 525.7572611620527 0.8226554588056068 1.2835642053165455 1.0222008163506209 1.1056963239583353 1.408634482066664 1.6581487243792483 1.0329926202842112 1.253685096902425 1.7039603928346245 1.2186061486798694 1.0 9.038253059734433 -6.6885394936740985 6.063710342154543 1.3397810172405067 1.0679858384343193 0.2367393405906396 0.22958791391213207 0.3051155899036795 19.28547192222249 0.041439066766627446 0.08666259765982166 2.0486157453995533e-07 6.6885394936740985 -0.2717951788061874 KAEDS(ph)DSEPEPEDNVR ddPTM_A549_PD325901_60min_R1 2 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 KAEDS(0.991)DS(0.009)EPEPEDNVR;KAEDS(0.5)DS(0.5)EPEPEDNVR 291.67 2.9590999999999994e-124 48530000.0 6237.9 6603.6 6775.700000000001 6421.9 7977.7 8151.1 8204.4 7051.299999999999 8369.0 8727.6 8490.1 True False 6871.16701590073 7160.108547336219 7235.5397475940545 6818.5661778069025 7417.373873570913 8084.72014408859 8516.622931619946 6910.6562898621605 8017.280033981462 8176.5378465384665 7445.871523178193 0.9228156830951931 0.9616212857081372 0.9717518929880272 0.9157512531046827 0.9961726911996037 1.085799038960279 1.1438047117934576 0.9281191957650673 1.0767416559666034 1.098130396298914 1.0 12.862225007691052 -6.989537996433045 6.181885291504318 1.0402296705278986 0.9470539193530965 0.4603046692464553 0.05566088684779026 0.12446682250274184 19.201770191109386 0.007930650281264502 0.014758966543895842 1.0243821531743059e-07 6.989537996433045 -0.09317575117480215 KAEDSDS(ph)EPEPEDNVR ddPTM_A549_MK2206_60min_R1 3 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 KAEDS(0.329)DS(0.671)EPEPEDNVR;KAEDS(0.02)DS(0.98)EPEPEDNVR;KAEDS(0.132)DS(0.868)EPEPEDNVR 198.47 1.1862999999999999e-39 285835000.0 11444.16 11949.18 11782.76 9895.89 15875.57 11113.07 11046.349999999999 11584.259999999998 18158.1 17371.1 17183.0 True False 13375.654425151051 12557.342222925645 13453.732544034281 12320.383494243388 13540.294683240407 12289.047691141164 13053.328808729597 13226.364330308366 14045.319342527297 13446.956445247095 12915.986873325553 1.0355890383238788 0.9722325011694932 1.0416341140621082 0.9538863437286219 1.0483360517502684 0.9514602183841514 1.0106334836626139 1.0240304871804888 1.0874367928891342 1.0411094852549063 1.0 13.65687025938622 -8.337889714220642 3.6150194274547687 1.041704419769208 1.0001617455009508 0.19266496873514982 0.03644774025820981 0.3202904949743462 8.135697328225756 0.006805491445115679 0.008366548812134037 4.5931463748577325e-09 8.337889714220642 -0.041542674268257196 KAEDSDS(ph)EPEPEDNVR ddPTM_A549_PD325901_60min_R1 2 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 KAEDS(0.007)DS(0.993)EPEPEDNVR;KAEDS(0.136)DS(0.864)EPEPEDNVR 233.87 2.5945999999999996e-56 445260000.0 24506.0 24181.0 24165.0 24161.0 26010.0 24736.0 26632.0 27289.0 26646.0 28805.0 28330.0 True False 26993.831079636286 26218.817733226864 25804.98221594971 25653.370096387764 24183.147329628777 24534.558217194677 27645.49533358958 26744.699487193644 25526.161283961042 26986.247384107934 24845.589598666473 1.086463694992576 1.0552704989795894 1.0386142020688747 1.0325120277187805 0.9733376313567841 0.9874814248123743 1.1126922637035503 1.0764364991615696 1.0273920521222446 1.0861584619250233 1.0 14.600702157741736 KAEENAS(ph)QEEEEAAEDEGGEEDLASELR ddPTM_A549_MK2206_60min_R1 1 KAEENASQEEEEAAEDEGGEEDLASELR 28 1 H0Y6F5;Q9H4I2;Q9H4I2-2 H0Y6F5 ZHX3 Zinc fingers and homeoboxes protein 3 1 KAEENAS(1)QEEEEAAEDEGGEEDLASELR 142.68 9.1304e-36 2283800.0 379.9 438.83 442.06 572.28 992.35 456.0 543.87 510.38 671.29 818.83 477.51 True False 444.0178323367451 461.1645726055229 504.7507552064025 712.4886256906258 846.3766295580958 504.25361733169757 642.6841390326912 582.7279279731969 519.2438868298526 633.855734297867 358.93108839444125 1.237055932722103 1.2848276104151053 1.406260899450747 1.9850290173462168 2.358047705881594 1.4048758484178907 1.7905502192845004 1.6235092105836701 1.4466394904729967 1.7659538412601974 1.0 8.4875630756762 -9.791027093378448 0.7310394146405136 1.0394647501665186 1.6503890137699784 0.0 0.37958188943311527 0.5176320810411131 0.5796141868969397 0.14528816290973773 0.07350239716937647 1.617979097177041e-10 9.791027093378448 0.6109242636034597 KAEFPSSGSNSVLNTPPT(ph)TPESPSSVTVTEGSR ddPTM_A549_PD325901_60min_R1 1 KAEFPSSGSNSVLNTPPTTPESPSSVTVTEGSR 33 1 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 KAEFPSSGSNSVLNT(0.002)PPT(0.328)T(0.328)PES(0.323)PS(0.015)S(0.004)VTVTEGSR 112.75 2.5716e-15 6880000.0 505.0 657.52 392.86 488.24 463.93 368.54 611.74 584.44 446.13 787.82 751.28 True False 556.267228238649 712.9315179666409 419.5218420590939 518.3974759265084 431.34515727161374 365.53873242904746 635.0201004569726 572.7828857156893 427.3807075588658 738.076910749798 658.8773227563055 0.8442652509447374 1.0820398476976085 0.6367222357935964 0.7867890698648989 0.654666874050471 0.5547902770425851 0.9637911012029825 0.8693316129314419 0.6486498970263365 1.120203845629675 1.0 9.363866062706533 -11.028951264842906 1.3109495312641501 1.000408075387507 0.7691815232842149 0.3052424379161711 0.15385749868046655 0.5368247078606536 1.6389814892035108 0.11006177087563948 0.024575139602015877 9.355106483120744e-12 11.028951264842906 -0.23122655210329224 KAEFPSSGSNSVLNTPPTTPES(ph)PSSVTVTEGSR ddPTM_A549_MK2206_60min_R1 2 KAEFPSSGSNSVLNTPPTTPESPSSVTVTEGSR 33 1 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 KAEFPSSGSNSVLNT(0.007)PPT(0.022)T(0.022)PES(0.578)PS(0.16)S(0.192)VT(0.016)VT(0.001)EGSR;KAEFPSSGSNSVLNT(0.029)PPT(0.112)T(0.112)PES(0.439)PS(0.141)S(0.12)VT(0.034)VT(0.01)EGS(0.003)R 74.807 7.992e-06 7763900.0 533.54 1140.33 445.29 324.24 811.4200000000001 573.51 475.77 394.42 698.3900000000001 966.37 772.21 True False 623.588508199387 1198.3679262567641 508.4388177755484 403.6788145556867 692.0611928815747 634.1984475348728 562.2112505333689 450.3302428605906 540.2057800996599 748.0663458268866 580.4489450882107 1.0743210293966858 2.064553543248577 0.8759406353960744 0.6954596402864333 1.192286072251199 1.0925998796302296 0.9685800194673965 0.7758309265118123 0.9306688980502238 1.288771996498681 1.0 9.181025366413733 -5.790072503303083 24.999980158749263 0.9546480531833158 1.5694378515516665 0.4173457150436046 0.26724132572837833 97.79951499706031 85390.10974311466 0.02974476104921042 0.09250371930252409 1.621539366831075e-06 5.790072503303083 0.6147897983683507 KAEFPSSGSNSVLNTPPTTPES(ph)PSSVTVTEGSR ddPTM_A549_PD325901_60min_R1 1 KAEFPSSGSNSVLNTPPTTPESPSSVTVTEGSR 33 1 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 KAEFPSSGSNSVLNT(0.001)PPT(0.025)T(0.025)PES(0.721)PS(0.179)S(0.045)VT(0.003)VTEGSR 99.228 2.5045e-10 5792100.0 249.27 323.91 285.2 287.56 267.4 283.39 474.66 232.94 351.98 602.06 250.15 True False 274.5757068971248 351.20703246224406 304.5553870469212 305.3219281038561 248.61874647992045 281.082165797655 492.72344604391816 228.29382896210512 337.1875046434214 564.0458288517979 219.3831358315008 1.2515807373088839 1.6008843666634056 1.3882351799403476 1.3917292546057933 1.1332627986085235 1.2812387093123818 2.2459495082719525 1.0406170378449155 1.5369800571289185 2.571053726230891 1.0 7.7773088185816155 -10.832615558701585 0.9249886155765364 0.9824527774112344 1.4393794785073362 0.0 0.5574689029955079 0.7516210265169271 1.0664853229444564 0.2426702585719888 0.05108505125806352 1.4702271598068156e-11 10.832615558701585 0.4569267010961018 KAEGAAT(ph)EEEGTPK ddPTM_A549_MK2206_60min_R1 2 KAEGAATEEEGTPK 14 1 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 KAEGAAT(0.923)EEEGT(0.077)PK;KAEGAAT(0.994)EEEGT(0.006)PK 120.31 1.4314e-06 14332300.0 7128.3 6989.9 6660.4 6334.799999999999 10007.2 7776.799999999999 6680.9 7008.2 10921.2 11122.6 11750.1 True False 8331.382769797374 7345.656053723178 7604.944871684211 7886.826284379978 8535.154136457682 8599.735814177953 7894.7330510296615 8001.633811712372 8447.56563757271 8609.996935018808 8832.225883737561 0.9432936701876737 0.8316879742906546 0.861045105932685 0.8929602105061294 0.9663650192838856 0.9736770693345057 0.8938554283995307 0.9059589187415908 0.9564480968638822 0.9748388513106379 1.0 13.10856135410389 -8.158079446604543 0.14634939940998057 1.0492971903071502 0.8191870133202607 0.3939250071929793 0.03970469432492592 3.268853710419681 0.33705742030081476 0.20468508321022658 0.2701096030326629 6.948971866345888e-09 8.158079446604543 -0.23011017698688951 KAEGAAT(ph)EEEGTPK ddPTM_A549_PD325901_60min_R1 2 KAEGAATEEEGTPK 14 1 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 KAEGAAT(0.973)EEEGT(0.027)PK;KAEGAAT(0.998)EEEGT(0.002)PK 118.66 1.7758000000000002e-06 22945000.0 12042.5 10679.400000000001 10543.099999999999 10570.4 13520.5 9816.599999999999 11228.8 11844.7 12046.3 12419.900000000001 12164.3 True False 13265.045734780051 11579.390517357566 11258.618166810646 11223.30960087981 12570.866723192836 9736.656864283354 11656.118128635126 11608.448166512611 11540.035903136673 11635.705394406603 10668.168215850992 1.2434230006863374 1.0854150668671179 1.0553468917074582 1.0520371795604024 1.1783528782865247 0.912683102410817 1.0926072679765413 1.0881388380494912 1.081726091081901 1.090693843495833 1.0 13.381024858169289 KAEGAATEEEGT(ph)PK ddPTM_A549_MK2206_60min_R1 2 KAEGAATEEEGTPK 14 1 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 KAEGAAT(0.01)EEEGT(0.99)PK;KAEGAATEEEGT(1)PK 130.36 6.0326e-09 113505000.0 11676.599999999999 13202.599999999999 12468.0 11323.0 19722.0 14750.4 13613.0 15662.9 20498.8 13806.7 14823.7 True False 13647.324614538671 13874.555947135965 14236.149879910932 14097.135508308791 16820.91992557543 16311.277537476917 16086.305890473857 17883.164040619507 15855.854529857108 10687.756880830408 11142.56617669301 1.2247918834967195 1.2451849714976322 1.2776365564414411 1.2651605819309268 1.5096091563503453 1.4638708246216514 1.4436805342131784 1.604941245763104 1.4229984617926632 0.9591827153053908 1.0 13.443793908819812 -10.62908524772683 0.9637219890179703 1.0057498893712882 1.386102575230325 0.630345723233285 0.11807021119520514 0.32166735082284226 0.5443243390339735 0.08095061654202032 0.023249605437179847 2.3491716563436908e-11 10.62908524772683 0.3803526858590369 KAEGAATEEEGT(ph)PK ddPTM_A549_PD325901_60min_R1 4 KAEGAATEEEGTPK 14 1 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 KAEGAATEEEGT(1)PK;KAEGAATEEEGT(1)PK;KAEGAAT(0.001)EEEGT(0.999)PK;KAEGAATEEEGT(1)PK 142.26 3.6936999999999997e-13 164669000.0 24929.4 24941.5 24537.600000000002 24274.899999999998 26534.7 23881.699999999997 24454.300000000003 23466.2 22088.0 27681.6 27491.699999999997 True False 27460.214335945704 27043.407737201855 26202.869092575504 25774.305440702094 24670.994211745518 23687.2153531524 25384.921768406424 22998.148232122214 21159.718173089062 25933.77905182859 24110.395184244913 1.13893671696803 1.121649294030383 1.0867872090996638 1.0690121519677318 1.0232513413080402 0.9824482416045573 1.0528621191988738 0.9538685723057122 0.8776180569166286 1.075626461269087 1.0 14.55736767734505 -6.85824288524688 0.6736258923697164 0.9446300913662611 1.1399094291412817 0.45378838359300055 0.054398565677623495 0.40287383486423967 0.31835239579650415 0.009781109565483712 0.04043647964277754 1.3859804831627088e-07 6.85824288524688 0.1952793377750206 KAEGAATEEEGT(ph)PKESEPQAAAEPAEAK ddPTM_A549_MK2206_60min_R1 2 KAEGAATEEEGTPKESEPQAAAEPAEAK 28 2 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 KAEGAATEEEGT(0.991)PKES(0.009)EPQAAAEPAEAK;KAEGAATEEEGT(0.987)PKES(0.013)EPQAAAEPAEAK 219.76 6.197799999999999e-91 250020000.0 6128.2 6132.0 5672.5 5407.2 6783.4 4851.9 4534.4 5283.5 6656.9 8629.3 8873.4 True False 7162.490339894818 6444.092608110351 6476.945796743245 6731.964242738435 5785.570845915646 5365.324837569439 5358.2417857757055 6032.45230504014 5149.122778884901 6679.935136690864 6669.88988661857 1.073854360664113 0.9661467756819758 0.9710723725346024 1.0093066538091433 0.8674162458847957 0.8044098071744172 0.8033478628373834 0.9044305689577746 0.7719951702973838 1.001506059356759 1.0 12.703447228779499 -6.761702227305119 24.99635851020066 0.8759022024272839 0.9998828467451742 0.3986796092180416 0.07432312820545962 6.8659276208876 653046.5932613136 0.012996478551897688 0.025704299522285843 1.731002809254026e-07 6.761702227305119 0.12398064431789035 KAEGAATEEEGT(ph)PKESEPQAAAEPAEAK ddPTM_A549_PD325901_60min_R1 2 KAEGAATEEEGTPKESEPQAAAEPAEAK 28 2 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 KAEGAATEEEGT(0.996)PKES(0.003)EPQAAAEPAEAK;KAEGAATEEEGT(0.986)PKES(0.014)EPQAAAEPAEAK 249.95 4.077199999999999e-138 514700000.0 9015.9 8702.9 8869.9 8783.9 9623.0 9510.7 10480.099999999999 10235.0 8734.0 9311.900000000001 10570.400000000001 True False 9931.187530845214 9436.323925830204 9471.864753041677 9326.461553315688 8947.113677547779 9433.24801246253 10878.925940430772 10030.854895797824 8366.940353303153 8723.945044821205 9270.307811286406 1.071289943442245 1.017908371320926 1.0217422059610448 1.0060573762136482 0.9651366340451883 1.0175765685986984 1.1735237018975688 1.0820411900007751 0.9025525930343519 0.9410631472452278 1.0 13.178401527552134 -8.756827926166787 24.99999167020036 0.9539831686288082 1.0422590945630146 0.37621424151631633 0.055158421133837045 109.62539135089307 594309.5597372886 0.01089980202955068 0.012157738488669273 1.7505401408750291e-09 8.756827926166787 0.08827592593420641 KAEGEPQEES(ph)PLK ddPTM_A549_MK2206_60min_R1 4 KAEGEPQEESPLK 13 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK 196.71 9.818099999999998e-31 1223704000.0 33046.1 33303.7 33157.6 28046.8 43650.8 35963.899999999994 32021.699999999997 39881.0 46804.5 43370.7 42944.8 True False 38623.47378042465 34998.716078396086 37859.84626709457 34918.26725906871 37229.82514386511 39769.576027095274 37839.628394401436 45534.253880440185 36203.355481428036 33573.22874774066 32280.42094381603 1.1964984548264932 1.084208788333685 1.172842396726781 1.0817166021423277 1.153325268238091 1.232003018062066 1.1722160767438934 1.4105842659143886 1.121526746644347 1.0400492857938488 1.0 14.97837177134966 -9.71275796353717 1.3023924674150593 1.0253970317231274 1.1796749298326168 0.34166304075637877 0.08551486893189128 0.3071705444325981 1.0571031970986045 0.023723113973715244 0.01664926350462748 1.9375014511787427e-10 9.71275796353717 0.15427789810948944 KAEGEPQEES(ph)PLK ddPTM_A549_PD325901_60min_R1 6 KAEGEPQEESPLK 13 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK 203.59 3.7063e-31 1853568000.0 93764.59999999999 89192.8 95972.5 95446.6 107136.90000000001 90444.6 95774.5 93912.9 97488.9 98904.0 103866.20000000001 True False 103283.51316614974 96709.3902781588 102485.77097952535 101342.11970704379 99611.97374624002 89708.04916441164 99419.25100731739 92039.73353625514 93391.78055978203 92659.1845609378 91091.31586208995 1.1338458796941575 1.0616751922277035 1.1250882700463603 1.1125332722218364 1.0935397387062686 0.984814505262252 1.0914240294633106 1.0104117243799735 1.0252544896944393 1.0172120545631549 1.0 16.475025901635174 -7.362532523313586 0.5988687099161107 1.008856428578107 1.1164397271229425 0.5837334122349331 0.033305743639893505 0.4116552792852479 0.283946808282579 0.006914254568524962 0.019268648023853075 4.3397776283257926e-08 7.362532523313586 0.1075832985448355 KAEGEPQEES(ph)PLKSK ddPTM_A549_MK2206_60min_R1 7 KAEGEPQEESPLKSK 15 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(0.998)PLKS(0.002)K;KAEGEPQEES(0.998)PLKS(0.002)K;KAEGEPQEES(0.995)PLKS(0.005)K;KAEGEPQEES(1)PLKSK;KAEGEPQEES(0.793)PLKS(0.207)K;KAEGEPQEES(0.968)PLKS(0.032)K;KAEGEPQEES(0.983)PLKS(0.017)K 187.43 3.875899999999999e-34 4305374400.0 35145.19 42907.2 38385.799999999996 39597.43 49285.299999999996 32890.46 35539.5 33716.84 62628.299999999996 56499.7 55639.7 True False 41076.83885460134 45090.99320853105 43829.483642948726 49298.8021275962 42035.49765784211 36370.90664627963 41996.567119260704 38496.305323491906 48443.090046844234 43736.37852925417 41822.82691240013 0.9821631364287904 1.0781431227252105 1.0479799401114522 1.1787534647252529 1.0050850399445124 0.8696424735338957 1.0041541956794189 0.9204615796087677 1.158293057241457 1.045753760759933 1.0 15.352002960239824 -11.50509659179982 2.5708341845857907 0.998964107569649 1.0538921814938396 0.0 0.09085709545741108 0.9824011238585716 11.783723463929078 0.08571299151738257 0.014415894673713622 3.1253841705035974e-12 11.50509659179982 0.054928073924190524 KAEGEPQEES(ph)PLKSK ddPTM_A549_PD325901_60min_R1 7 KAEGEPQEESPLKSK 15 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(0.983)PLKS(0.017)K;KAEGEPQEES(1)PLKSK;KAEGEPQEES(0.999)PLKS(0.001)K;KAEGEPQEES(1)PLKSK;KAEGEPQEES(1)PLKSK;KAEGEPQEES(1)PLKSK;KAEGEPQEES(1)PLKSK 198.35 3.4820999999999996e-39 7374137000.0 56476.5 62202.5 60991.299999999996 71503.2 71550.0 67920.7 67263.7 67638.6 79889.4 70972.5 72786.3 True False 62209.95270419814 67444.52297469284 65130.536388481356 75919.79026845054 66524.57483409999 67367.57633823625 69823.45691160893 66289.4950615448 76531.92634087206 66491.28423775737 63834.04653037126 0.974557561137842 1.0565603567463606 1.020310319156929 1.18933068472056 1.0421487975456578 1.055354939878107 1.0938278349373949 1.0384661268498039 1.198920176624857 1.0416272796699773 1.0 15.962038484718345 -5.286436285552819 1.2919865933867605 1.0897025838815027 0.9331960652503856 0.16681837241668707 0.06188451952776069 1.9490675997729978 2.827509970390077 0.011188322246778858 0.39665141886567135 5.170871131874943e-06 5.286436285552819 -0.1565065186311171 KAEGEPQEESPLKS(ph)K ddPTM_A549_MK2206_60min_R1 1 KAEGEPQEESPLKSK 15 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(0.246)PLKS(0.754)K 124.18 8.535e-08 187090000.0 2603.9 2496.3 3066.1 2256.1 3859.5 2764.9 2500.9 2614.2 3417.7 4095.7 4492.8 True False 3043.374660757177 2623.35100744062 3500.9190846001684 2808.8446012801774 3291.772662648735 3057.47988280792 2955.281157826055 2984.7708556517337 2643.596406945413 3170.4785254128115 3377.113765028054 0.9011762328746706 0.7768026752924113 1.0366600974045321 0.8317293395228111 0.974729574329691 0.9053529420506571 0.875090791559847 0.8838230108090359 0.782797557583451 0.9388130652407779 1.0 11.721575064977944 -11.133325527043672 1.5162419937646958 0.9996294094953783 0.8732657095976852 0.12876200024705708 0.07459229848810132 0.42326556564019047 1.7510848268807595 0.05293580109004508 0.0115232948219234 7.356554774877387e-12 11.133325527043672 -0.12636369989769303 KAEGS(ph)PNQGK ddPTM_A549_PD325901_60min_R1 1 KAEGSPNQGK 10 1 Q9P2E9;A0A087WVV2;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KAEGS(1)PNQGK 62.162 0.002997 23952000.0 5911.2 5232.9 5350.1 5243.8 6087.5 4392.3 3428.8 4575.2 4843.3 6513.0 6839.0 True False 6511.300672404561 5673.894847864147 5713.189958764847 5567.697616466126 5659.935000734916 4356.530565062426 3559.284860311352 4483.944046825033 4639.752944029443 6101.768068484466 5997.846355992941 1.0856064470372078 0.9459886951246912 0.952540231887789 0.9282828011929619 0.9436612185104758 0.7263491437571518 0.5934271485222321 0.747592349101233 0.773569823007134 1.0173265046023876 1.0 12.550228850502265 -5.955063056716989 1.0055967362338472 0.8481646185044361 1.0585568225633528 0.2816887858850202 0.12148738466723524 1.1007792179843852 1.583511900894541 0.02175495920499667 0.19102701063631974 1.1090137820278207e-06 5.955063056716989 0.21039220405891668 KAEGS(ph)PSEGKK ddPTM_A549_PD325901_60min_R1 2 KAEGSPSEGKK 11 2 Q9P2E9;A0A087WVV2;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KAEGS(0.747)PS(0.253)EGKK;KAEGS(0.5)PS(0.5)EGKK 46.318000000000005 0.0073049 121528000.0 12835.900000000001 11617.1 10122.0 10714.4 10998.2 9694.7 6749.6 9071.8 10008.2 14410.7 15860.8 True False 14138.99111870985 12596.113787215989 10808.93978853064 11376.20415383208 10225.724373730223 9615.749577467546 7006.459721522838 8890.855832310575 9587.590158453006 13500.805942654555 13910.022149895138 1.0164607192100292 0.9055423241947135 0.7770612923583393 0.8178422745299395 0.7351335794822808 0.6912821183063347 0.5036986746693036 0.6391690636076809 0.689257720450523 0.970581196576767 1.0 13.763837096735024 -5.4934091190792165 2.3063341975670855 0.7877254476150318 1.0266716462663887 0.24109115599483333 0.13638855663177585 0.5779068065774015 4.9378804802775464 0.023570165937838634 0.22577721806441592 3.2106345946959237e-06 5.4934091190792165 0.2389461986513569 KAEGT(ph)PNQGK ddPTM_A549_MK2206_60min_R1 1 KAEGTPNQGK 10 1 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KAEGT(1)PNQGK 68.809 0.0024157 27193000.0 2546.0 2070.8 1627.9 1164.4 1152.2 1536.9 1121.2 1224.1 1589.3 3060.0 3442.4 True False 2975.7025562762647 2176.1948748980617 1858.760698548847 1449.6780522719023 982.712906310111 1699.5337378883464 1324.9075269521259 1397.619923649027 1229.3260875905862 2368.743874737703 2587.557074593254 1.1500046068525944 0.8410229464175758 0.7183457774901568 0.5602496913038262 0.3797840503535894 0.6568101452044304 0.512030262041811 0.5401310515512873 0.47509139012279666 0.915436377421763 1.0 11.337374969621694 -5.338229642538283 1.961051742039106 0.6711459321960719 1.2464901117442833 0.41551669518398837 0.1777068811235139 0.6602287040952739 3.013018348722241 0.032321088568124476 0.6432905257460902 4.589552662059471e-06 5.338229642538283 0.5753441795482114 KAEGT(ph)PNQGK ddPTM_A549_PD325901_60min_R1 2 KAEGTPNQGK 10 1 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KAEGT(1)PNQGK;KAEGT(1)PNQGK 74.76899999999999 0.00098284 98336000.0 9077.1 9088.5 8088.4 8198.8 8164.5 6779.299999999999 4403.5 6447.200000000001 6755.7 8186.9 10739.0 True False 9998.600509792157 9854.419791093518 8637.327463500413 8705.221255174203 7591.053685995928 6724.091628469752 4571.077602187657 6318.605538269444 6471.781422579588 7669.977736814903 9418.171080129867 1.061628677661936 1.046319896639384 0.9170917994602104 0.9243006079535101 0.80600082769905 0.7139487668318119 0.48534663081578117 0.6708951753488764 0.6871590426121618 0.8143808040392002 1.0 13.20123121394778 -6.177580444122512 1.3630488990877696 0.7948911336305782 1.0606420681714073 0.44719146682558075 0.12772474428422304 0.5291977318798431 1.7561946503852774 0.025587875326800548 0.11960214661131281 6.643845979243421e-07 6.177580444122512 0.2657509345408291 KAEGT(ph)PNQGKK ddPTM_A549_MK2206_60min_R1 1 KAEGTPNQGKK 11 2 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KAEGT(1)PNQGKK 45.79 0.014283 8004300.0 2562.4 1991.0 1564.0 1209.0 1703.6 1307.2 1527.2 1188.1 2052.2 3105.4 3662.3 True False 2994.8704753347624 2092.333395751419 1785.7987176917477 1505.2050542740724 1453.0026967452739 1445.527036350867 1804.672471603004 1356.5168134036505 1587.3799766899901 2403.8879832060325 2752.8498356620007 1.087916397232238 0.7600608535366253 0.6487090921406187 0.5467806615438227 0.5278176375341077 0.5251020297673625 0.655565170400593 0.49276818365845865 0.5766315169560492 0.873236146797651 1.0 11.426710199624841 -10.721581231532827 0.9762359163485334 1.0000796828173504 0.6347449697713835 0.31039368136689216 0.1623779011357551 0.4426588618697333 0.7495666360942249 0.11167731562029935 0.02892841423942754 1.898535701993752e-11 10.721581231532827 -0.3653347130459669 KAENPSPRS(ph)PSSQTPNSR ddPTM_A549_PD325901_60min_R1 2 KAENPSPRSPSSQTPNSR 18 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 KAENPS(0.043)PRS(0.922)PS(0.009)S(0.01)QT(0.012)PNS(0.003)R;KAENPS(0.09)PRS(0.865)PS(0.022)S(0.014)QT(0.004)PNS(0.005)R 45.395 0.0076544 24765200.0 1037.0500000000002 1272.48 1074.9 1167.65 1347.62 1525.56 1152.15 1197.08 1722.8600000000001 1207.4 1488.1100000000001 True False 1142.3305525641401 1379.7163553689481 1147.849177898793 1239.7730885744452 1252.967820236613 1513.1363451578056 1195.995698730672 1173.2033003089073 1650.4541856070373 1131.164557943827 1305.081903906514 0.8752941475510397 1.0571875613622639 0.8795227138334576 0.949958071492234 0.9600683424435605 1.1594186852399992 0.9164142841538809 0.8989499408406068 1.2646364804130048 0.8667383668089347 1.0 10.34992463448551 -8.744467262277354 24.99998568068599 1.1249672450992554 0.9671003635174383 0.0 0.1245222410602579 236.3575436337116 348155.17093779857 0.02005462588197024 0.022711153591590885 1.8010788971594943e-09 8.744467262277354 -0.15786688158181705 KAENQNES(ph)SQGK ddPTM_A549_MK2206_60min_R1 1 KAENQNESSQGK 12 1 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 KAENQNES(0.834)S(0.166)QGK 41.401 0.039753 8318400.0 776.52 574.59 759.74 372.93 328.49 281.56 287.45 138.31 445.66 973.46 1101.9 True False 907.5775919087378 603.834176727679 867.4825561247624 464.2978667414639 280.1695561480717 311.3544923155983 339.6759441869323 157.91586605661047 344.7187215727809 753.5547099026682 828.2678191071074 1.0957537779110242 0.7290325216046989 1.047345479460894 0.5605648994572652 0.33825961806665533 0.375910406191135 0.41010399818878773 0.19065797609624333 0.41619233974874936 0.9097959530952419 1.0 9.693953526126197 -6.269703339430693 24.18458936649102 0.5970157939455867 0.9345427842228915 0.345423201408978 0.2506548652356304 494.5717380171596 1447373.5979534686 0.044509323429647724 0.10513438101908693 5.373987607016333e-07 6.269703339430693 0.3375269902773048 KAENQNES(ph)SQGK ddPTM_A549_PD325901_60min_R1 1 KAENQNESSQGK 12 1 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 KAENQNES(0.606)S(0.394)QGK 88.507 0.0001161 19387000.0 1549.6 1465.3 1182.8 1409.9 1535.3 1237.7 406.81 885.54 1040.7 1699.0 1583.1 True False 1706.9142512447727 1588.7859734707963 1263.0719207542018 1496.9863208847771 1427.4658244974637 1227.620581558127 422.29137716497365 867.8772100073086 996.9629981317368 1591.7248500468454 1388.388736097737 1.2294209876999556 1.144337988463018 0.9097393892032315 1.0782184282856322 1.0281456391741974 0.8842052298756964 0.3041593223752905 0.6250966947820394 0.7180719435493567 1.1464547418618602 1.0 10.439195850503186 -7.2949112446906526 3.9845353481597887 0.7961491094584411 1.0750053978293597 0.329114776463147 0.21367750873421815 0.2416869197163147 8.553057405346467 0.033378311674563774 0.055831111660490165 5.070943308566043e-08 7.2949112446906526 0.2788562883709186 KAENQNESS(ph)QGK ddPTM_A549_PD325901_60min_R1 1 KAENQNESSQGK 12 1 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 KAENQNES(0.112)S(0.888)QGK 89.541 0.00011495 21504000.0 1519.4 1340.9 1178.7 900.47 1143.8 879.62 601.52 864.79 854.12 1371.7 1224.1 True False 1673.6483694768372 1453.9023488889598 1258.6936700988997 956.0899867842511 1063.4634338957858 872.4566663570813 624.411172764374 847.5410850353687 818.2243066823094 1285.0906279042138 1073.5434602092348 1.5589945181638396 1.3543022735247183 1.1724664317302802 0.8905927167568122 0.9906105093207085 0.8126887254168904 0.5816356728051565 0.7894799944756611 0.7621715720040216 1.1970550569547955 1.0 10.068164881596253 -5.810745018847916 1.1419945391780923 0.8511732217403701 1.6203525863362331 0.7018921814244128 0.14984610058080652 0.2738442551805796 0.5016263141445731 0.020023726411441116 0.198517574863177 1.5461619492151183e-06 5.810745018847916 0.769179364595863 KAEPSEVDMNS(ph)PK ddPTM_A549_MK2206_60min_R1 14 KAEPSEVDMNSPK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPS(0.002)EVDMNS(0.998)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPS(0.002)EVDMNS(0.998)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPS(0.016)EVDMNS(0.984)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK 154.6 2.1113e-18 2223020900.0 49453.5 55106.200000000004 50352.5 45327.0 70643.1 53150.2 50835.0 52701.9 73587.2 71361.5 79411.40000000001 True False 57800.04177800799 57910.87020238921 57493.24164486809 56432.117034806346 60251.59357034867 58774.518885752615 60071.06148110184 60172.55571779974 56919.816694611494 55240.88758728576 59691.35773685648 0.9683150789233816 0.9701717702197967 0.9631753041758814 0.9453984491956411 1.0093855434812178 0.9846403418205755 1.006361117566118 1.0080614346730823 0.9535688054799649 0.9254419681792098 1.0 15.865234449184914 -6.748298836271216 24.999735799446743 0.9843970536750768 0.9624663546345118 0.15639660772774033 0.024719960782282353 314.81638832130426 598930.8457532999 0.003137685599228711 0.006500423744170241 1.7852587228314848e-07 6.748298836271216 -0.021930699040564994 KAEPSEVDMNS(ph)PK ddPTM_A549_PD325901_60min_R1 12 KAEPSEVDMNSPK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPS(0.001)EVDMNS(0.999)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPS(0.005)EVDMNS(0.995)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK 172.95 3.6782e-22 3935321600.0 65847.67 66877.0 67759.90000000001 68739.11000000002 82974.0 73914.7 75071.5 75676.0 75782.9 73560.69999999998 83793.4 True False 72532.47698390752 72512.95949485198 72358.49428737962 72984.96870685439 77146.19248476038 73312.76318954068 77928.38701320105 74166.58281332643 72598.00825513357 68916.06484805245 73487.34301012695 0.9870063879423719 0.9867407981379774 0.98463886872884 0.9931637982447762 1.0497888387953995 0.99762435525037 1.06043277415081 1.0092429495390232 0.9878981234241817 0.937795027349886 1.0 16.165208170329198 -4.3792528789675504 19.184306485251433 1.0010252193685047 0.9846220135121457 0.0 0.03146218620667885 0.0 0.0 0.0033212700644636318 0.0 4.175871451452101e-05 4.3792528789675504 -0.016403205856359016 KAEPSEVDMNS(ph)PKSK ddPTM_A549_MK2206_60min_R1 3 KAEPSEVDMNSPKSK 15 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KAEPS(0.008)EVDMNS(0.984)PKS(0.008)K;KAEPS(0.014)EVDMNS(0.984)PKS(0.002)K;KAEPSEVDMNS(0.837)PKS(0.163)K 72.819 0.00020217 15513200.0 2782.81 3499.22 4262.900000000001 3610.8 3514.6499999999996 2046.61 2203.7400000000002 2263.42 4113.17 6844.7 6054.6 True False 3252.4802948276324 3677.3153516229454 4867.443320746901 4495.44616209497 2997.6496408287003 2263.180911770231 2604.1310323274 2584.2667164330355 3181.5435623827916 5298.477516149395 4551.075721540877 0.7146618720126298 0.8080101445505946 1.0695149056098128 0.987776613080155 0.6586683729827667 0.4972848289599489 0.5722012094858551 0.5678364576975374 0.6990750664340964 1.1642253041563255 1.0 12.15199187496351 -5.259319681183574 20.979971986493872 0.8034454860066546 0.7146617602630269 0.01358395732160178 0.21493359812215987 107.60493197911187 1064157.6422680605 0.029754982930315154 0.2644511372044695 5.50402399831647e-06 5.259319681183574 -0.0887837257436277 KAEPSEVDMNS(ph)PKSK ddPTM_A549_PD325901_60min_R1 3 KAEPSEVDMNSPKSK 15 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KAEPS(0.007)EVDMNS(0.988)PKS(0.005)K;KAEPS(0.001)EVDMNS(0.998)PKS(0.001)K;KAEPS(0.007)EVDMNS(0.992)PKS(0.001)K 68.653 0.00052095 94398000.0 5332.4 5544.799999999999 6800.7 7053.5 6859.700000000001 9777.2 7966.700000000001 8168.1 7288.1 6878.7 7915.1 True False 5873.741322494593 6012.079755477294 7262.2363979312695 7489.178675339226 6377.898336680299 9697.577724820329 8269.877128045515 8005.180837749505 6981.806502050454 6444.37770807371 6941.592877952871 0.8461662079247154 0.8660951255974987 1.046191634343292 1.0788847469181804 0.9187946410595589 1.3970248465047144 1.1913515058354107 1.1532195820896793 1.0057931406817742 0.9283716030857468 1.0 12.761051038739318 -5.754052426898737 5.247572700586368 1.0536565275076522 0.8518828729588169 0.28940950332281545 0.13021346497598388 0.17725877597929485 14.185303696588006 0.018479032854176066 0.06866178622133196 1.7617633580902131e-06 5.754052426898737 -0.20177365454883522 KAEPSEVDMNSPK ddPTM_A549_PD325901_60min_R1 1 KAEPSEVDMNSPK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 49.31 0.022352 3650900.0 762.65 1198.4 1113.3 865.4 1230.2 1358.6 942.67 1144.6 1006.7 1183.4 1217.8 False True 840.0736665667441 1299.3933737851655 1188.8552328167507 918.853792534 1143.7949959596049 1347.5360120423948 978.5438226988168 1121.77005507867 964.391899893552 1108.6799220396927 1068.0183202702437 0.7865723374053901 1.2166395923399294 1.1131412357382888 0.8603352349812687 1.0709507264540061 1.2617161957497356 0.9162238176319045 1.050328476383088 0.9029731808809508 1.0380720077527885 1.0 10.060720679193489 KAEPYETS(ph)QGK ddPTM_A549_MK2206_60min_R1 2 KAEPYETSQGK 11 1 J3KRK0;Q86UE8-3;Q86UE8-2;Q86UE8;J3KST4 J3KRK0 TLK2 Serine/threonine-protein kinase tousled-like 2 1 KAEPYET(0.104)S(0.896)QGK;KAEPYET(0.101)S(0.899)QGK 102.28 9.7652e-05 15971900.0 3964.1 4751.6 4228.8 3725.4 4923.4 4178.2 4150.3 4289.9 5099.0 6123.299999999999 6093.2 True False 4633.143167059993 4993.4361442754625 4828.507427989039 4638.123167239561 4199.174381988542 4620.334350735305 4904.355787646636 4898.006462267755 3944.0846414298103 4740.042277183455 4580.09027623507 1.0115833722973107 1.0902484106449037 1.0542384836916736 1.0126706871490305 0.9168322300931483 1.0087867426345396 1.070798934486968 1.0694126462271436 0.8611368779988177 1.034923329301681 1.0 12.161160319620349 -8.748950618913385 24.99593165545667 0.9344257435411477 1.0285763337344245 0.12837418695793257 0.06112840178932227 210.0296344235759 420368.7599600254 0.011345930664423376 0.012822057296489785 1.782581442840097e-09 8.748950618913385 0.09415059019327676 KAEPYETS(ph)QGK ddPTM_A549_PD325901_60min_R1 1 KAEPYETSQGK 11 1 J3KRK0;Q86UE8-3;Q86UE8-2;Q86UE8;J3KST4 J3KRK0 TLK2 Serine/threonine-protein kinase tousled-like 2 1 KAEPYET(0.133)S(0.867)QGK 101.62 0.00010267 9945700.0 5375.3 5314.1 5123.6 4740.3 6390.9 5013.3 4921.0 4690.8 5430.1 5641.1 5976.9 True False 5920.996498913287 5761.93785683557 5471.3183067097 5033.0975649975935 5942.025231408093 4972.473346954318 5108.271347874527 4597.238314138589 5201.89178068141 5284.919983283855 5241.779190690769 1.1295776268921793 1.0992332273493295 1.0437903062430758 0.9601887797822947 1.1335893816284628 0.9486231995016636 0.974530052114109 0.8770377665474991 0.992390482590301 1.0082301812082628 1.0 12.35584086625574 -5.4125970393666485 0.6768961085900225 0.9857393604219244 1.2107754682002985 0.438763197471864 0.0571339833551904 1.8434507639286102 0.6523377714000562 0.009288016643167847 0.3045891904191994 3.867256344616661e-06 5.4125970393666485 0.22503610777837402 KAEPYETSQGKGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 KAEPYETSQGKGTPR 15 2 J3KRK0;Q86UE8-3;Q86UE8-2;Q86UE8;J3KST4 J3KRK0 TLK2 Serine/threonine-protein kinase tousled-like 2 1 KAEPYET(0.001)S(0.008)QGKGT(0.991)PR;KAEPYET(0.01)S(0.085)QGKGT(0.905)PR 77.39 0.00019471 29929000.0 3305.4 3545.2 2974.6 2899.1 4126.2 2975.0 2635.06 3184.3999999999996 4129.7 4313.9 4870.799999999999 True False 3863.2707107288193 3725.6355372264884 3396.4430087249793 3609.3796301455423 3519.241445944087 3289.812525354826 3113.816293230886 3635.798451815998 3194.3295437757797 3339.386993866331 3661.2459327587762 1.0551792427169229 1.0175868012283988 0.9276740954043844 0.9858337015415536 0.9612141633141569 0.8985499979445324 0.8504799596689759 0.9930495024343794 0.8724706295184133 0.912090325314497 1.0 11.838118970092232 -5.235938926837097 0.9721213430138043 0.93514057543521 1.132855280419664 0.41599415650618876 0.04713032709886969 1.8920726612272958 1.3070234875512283 0.00847511108865835 0.3957145697415371 5.8084609393079365e-06 5.235938926837097 0.1977147049844541 KAEPYETSQGKGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 KAEPYETSQGKGTPR 15 2 J3KRK0;Q86UE8-3;Q86UE8-2;Q86UE8;J3KST4 J3KRK0 TLK2 Serine/threonine-protein kinase tousled-like 2 1 KAEPYET(0.001)S(0.009)QGKGT(0.99)PR;KAEPYET(0.011)S(0.105)QGKGT(0.884)PR 76.061 0.00022025 49508000.0 4584.299999999999 4547.1 4325.5 4598.4 5153.9 4369.4 5192.8 5204.6 5081.0 5129.7 5088.8 True False 5049.694761216706 4930.300075048835 4619.054441344525 4882.432724275878 4791.907843989763 4333.817055069951 5390.414845609193 5100.790170070284 4867.46323965346 4805.80986655992 4462.909860561026 1.1314803388347878 1.1047276841995313 1.0349871688342525 1.0940020920929185 1.073718267611925 0.9710742969218635 1.207825166545392 1.1429292388686225 1.0906478938029858 1.0768332806873648 1.0 12.123768952772163 -10.442136912024498 0.9323025970779337 1.0035094608011053 1.0925175194795786 0.06554153063158374 0.061137484849683794 0.5754976879572941 0.947004062789745 0.0311053571446381 0.010680800392207035 3.6129594556419396e-11 10.442136912024498 0.08900805867847339 KAEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_A549_MK2206_60min_R1 5 KAEQGSEEEGEGEEEEEEGGESK 23 1 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK 330.02 1.9938999999999993e-218 2481382300.0 22213.78 24538.770000000004 22240.02 20301.639999999996 28208.210000000003 22812.76 20449.370000000003 20114.18 27198.089999999997 32354.01 31988.55 True False 25962.922989221763 25787.688579439015 25393.989256674417 25275.54271137526 24058.819676189843 25226.79112131549 24164.755828067264 22965.426612092797 21037.766041424944 25045.216670164184 24044.910195933062 1.0797679333239145 1.0724801369314627 1.0561066375273689 1.051180582726832 1.0005784791934524 1.0491530604918762 1.0049842412035488 0.9551055264900574 0.8749363532654514 1.0416015891130386 1.0 14.55344391752751 -8.066835690885478 2.278231302239785 0.9400580980788054 1.050912143138021 0.3867081375156912 0.04484492708809936 0.18098070623621604 1.861629062696901 0.008035881960935852 0.010948216284915697 8.573621546037178e-09 8.066835690885478 0.1108540450592157 KAEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_A549_PD325901_60min_R1 5 KAEQGSEEEGEGEEEEEEGGESK 23 1 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK 294.23 7.605199999999997e-157 3558005300.0 32308.68 31534.21 31927.12 35820.63999999999 36546.38 33294.35 35840.48 33642.82 36660.53999999999 35158.78999999999 35119.14 True False 35588.63340920686 34191.70854601963 34093.88635656906 38033.199578224056 33979.488346966486 33023.21185230658 37204.4090790632 32971.78756281829 35119.824994262 32938.85799916336 30799.708418570815 1.155486049593526 1.1101309168694466 1.1069548416897352 1.2348558324432635 1.1032405854361402 1.072192353366407 1.2079467952570175 1.0705227177715035 1.1402648530622568 1.0694535659728108 1.0 14.910629072512707 -10.937907012304262 0.5236628250493423 0.9630398570010523 1.1374108145108466 0.31288378845908504 0.052791243123402304 1.0460557442222778 0.34149972406615414 0.09451961838212358 0.010612573935894059 1.1537002525409922e-11 10.937907012304262 0.17437095750979426 KAERS(ph)PNQGK ddPTM_A549_MK2206_60min_R1 2 KAERSPNQGK 10 2 Q9P2E9;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KAERS(1)PNQGK;KAERS(1)PNQGK 43.382 0.013958000000000002 138277000.0 2623.7 1857.83 1483.53 1318.34 1264.55 1039.52 953.0 693.0 1555.52 2949.8 3014.1 True False 3066.5164166936534 1952.38561156648 1693.9168616734255 1641.3333591825324 1078.5363701392553 1149.5213164224706 1126.147764168191 791.2348722234914 1203.19720365501 2283.438131274925 2265.6157850719032 1.3535024062327197 0.8617461197219358 0.747662897140199 0.7244535326763014 0.4760455754438637 0.5073769895128042 0.49706034517783465 0.3492361226633933 0.5310685119616716 1.0078664468708476 1.0 11.14568750682241 -2.2376929611521366 14.603246214892867 0.7246212219830074 1.1109045284848822 0.0 0.28762863411554906 0.0 0.0 0.03979704143557826 0.0 0.005785048960339157 2.2376929611521366 0.3862833065018748 KAERS(ph)PNQGK ddPTM_A549_PD325901_60min_R1 2 KAERSPNQGK 10 2 Q9P2E9;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KAERS(1)PNQGK;KAERS(1)PNQGK 67.997 0.00088528 308990000.0 3325.1 3030.6000000000004 2629.95 2674.82 2756.65 2404.79 1497.92 2250.6 2505.51 2922.12 3635.6 True False 3662.661704190753 3285.9992978916252 2808.4342221740917 2840.0375564430237 2563.0324139262257 2385.206187545583 1554.924165293276 2205.710017438456 2400.2121278457266 2737.6168445078806 3188.4442479672357 1.148730044919509 1.0305964421321103 0.8808164746692949 0.89072830997552 0.8038504720790599 0.7480783736664832 0.4876748797739224 0.6917825264922498 0.752784725458493 0.8586058377069707 1.0 11.63863693961396 -5.565087154687226 1.3222557879935324 0.8227439828918452 1.2034186806569274 0.45747888893275623 0.126611544661622 0.7943254382920814 1.7373890387149036 0.02360297794802811 0.3480825860883638 2.7221549682509814e-06 5.565087154687226 0.3806746977650821 KAERS(ph)PNQGKK ddPTM_A549_MK2206_60min_R1 1 KAERSPNQGKK 11 3 Q9P2E9;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KAERS(1)PNQGKK 49.928999999999995 0.0047973 6015700.0 1326.9 1099.2 1064.2 601.94 1068.8 819.03 745.15 775.04 1003.8 1838.7 2259.3 True False 1550.8482804096527 1155.144584937198 1215.1195622554712 749.415327022114 911.5809358307989 905.6992109718866 880.5341096221695 884.9042934604539 776.4409027392122 1423.3363929673892 1698.2534564921377 0.9132018983862628 0.6801956330612926 0.7155113140563756 0.4412859129814958 0.5367755515797586 0.5333121552083705 0.5184939304884294 0.5210672706583422 0.45719965990412625 0.838117765947252 1.0 10.729836075199897 -10.850596793779944 1.077839242750442 1.001863041805683 0.577109799444069 0.4453172274788363 0.137228113080826 0.303270219157963 0.6209842582262329 0.0974866890793863 0.023378518900667184 1.4105978131426946e-11 10.850596793779944 -0.42475324236161405 KAES(ph)GDKEKDTLK ddPTM_A549_MK2206_60min_R1 1 KAESGDKEKDTLK 13 3 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 KAES(1)GDKEKDTLK 54.7 0.005691300000000001 4474300.0 922.88 1322.8 931.13 1036.5 1347.0 769.71 862.31 708.96 1400.9 1613.4 1670.1 True False 1078.63958175029 1390.1248698643785 1063.1782352968767 1290.4425465302531 1148.8580843601096 851.1602013078533 1018.9805650785662 809.457251098941 1083.5983867776085 1248.931819445036 1255.368077584881 0.859221770100617 1.107344447167039 0.8469055843304973 1.02793958964836 0.9151563632001232 0.6780164451412081 0.8116986430297918 0.6447967457131791 0.8631718506513814 0.9948730111472746 1.0 10.293894713260373 -4.93987760078132 15.65879959932419 0.9018748218473347 0.48667198959041963 0.0 0.13665374177441922 9046576.642523654 54526737.66941191 0.019296263485598274 118712432.99998318 1.148477256535918e-05 4.93987760078132 -0.41520283225691507 KAES(ph)GDKEKDTLK ddPTM_A549_PD325901_60min_R1 2 KAESGDKEKDTLK 13 3 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 KAES(1)GDKEKDTLK;KAES(1)GDKEKDTLK 63.13399999999999 0.0019652999999999997 14032600.0 3457.0 3598.2000000000003 3438.0 3835.8 4196.6 4019.6000000000004 4025.9 3760.5 4243.1 4039.3999999999996 3932.4 True False 3807.9520950911096 3901.432941883999 3671.323354373478 4072.728654266139 3901.845293484051 3986.865710294133 4179.107827557013 3685.493877444819 4064.777262777721 3784.3515946316816 3448.7397295374503 1.1041575745705337 1.131263373825912 1.0645405691040306 1.1809324488549848 1.1313829397057376 1.1560355442736923 1.2117782596825653 1.0686494680591982 1.1786268554753752 1.0973143499985845 1.0 11.751853539852828 -10.874796990695941 1.0141436420413512 0.9963744371539974 1.139174039862033 0.23136227650633723 0.05153250750536885 0.3147709143056186 0.5500629050731158 0.03359272540624235 0.00730637919695293 1.3341449273996455e-11 10.874796990695941 0.1427996027080355 KAETDKIVVGSSVAPGNTAPS(ph)PSSPTSPTSDATTSLEMNNPHAIPR ddPTM_A549_MK2206_60min_R1 1 KAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPR 46 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8 P49757-4 NUMB Protein numb homolog 1 KAETDKIVVGSSVAPGNTAPS(0.22)PS(0.22)S(0.22)PT(0.057)S(0.057)PT(0.041)S(0.041)DAT(0.049)T(0.049)S(0.049)LEMNNPHAIPR 94.902 1.9436e-11 8471900.0 0.0 251.18 342.72 282.45 471.02 333.15 340.71 183.51 508.98 564.72 590.37 True False 0.0 263.9639891234765 391.3228494420176 351.65026267966215 401.7335819564212 368.4037118729276 402.61259677832584 209.52310447580498 393.6968426740431 437.14935978492656 443.76483561690065 0.0 0.5948285396622884 0.8818248271024434 0.7924248035354463 0.9052848484444478 0.8301777930664344 0.9072656606930855 0.47214895741916096 0.8871744921535853 0.9850923838461026 1.0 8.793651541196382 -5.411880542209923 2.503932302876518 0.8877384543149592 7.840038320769273e-15 0.7553390383715036 0.1394901829626999 0.14259292965058726 1.3588280674160185 0.02055534762692342 0.23030010277257706 3.873641793291939e-06 5.411880542209923 -0.8877384543149514 down KAETDKIVVGSSVAPGNTAPS(ph)PSSPTSPTSDATTSLEMNNPHAIPR ddPTM_A549_PD325901_60min_R1 1 KAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPR 46 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8 P49757-4 NUMB Protein numb homolog 1 KAETDKIVVGSSVAPGNT(0.004)APS(0.402)PS(0.242)S(0.242)PT(0.057)S(0.014)PT(0.017)S(0.017)DAT(0.002)T(0.002)SLEMNNPHAIPR 126.83 2.0840999999999997e-24 15079000.0 249.91 481.95 426.79 388.12 602.7 648.95 494.39 469.61 561.34 627.91 514.67 True False 275.2806792259817 522.5656179036719 455.75453589675874 412.093290915526 560.3684312021245 643.6651663586866 513.2042819905888 460.2432601480818 537.7488319124328 588.263655440209 451.368852761937 0.609879652841645 1.1577352196680832 1.0097164062340271 0.912985662156166 1.2414867082059748 1.4260292052056402 1.136995339510645 1.0196610983053929 1.191373371516299 1.3032881020491545 1.0 8.81816305687274 -5.257884592689294 24.530557521717792 1.107897253279412 0.6098794063499094 0.5110084317687154 0.14603483643879747 169.2429172264358 1167826.6906319624 0.019548154895022953 0.19800575465161224 5.522241651579413e-06 5.257884592689294 -0.4980178469295026 KAETDKIVVGSSVAPGNTAPSPS(ph)SPTSPTSDATTSLEMNNPHAIPR ddPTM_A549_PD325901_60min_R1 2 KAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPR 46 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8 P49757-4 NUMB Protein numb homolog 1 KAETDKIVVGSSVAPGNTAPS(0.073)PS(0.341)S(0.341)PT(0.014)S(0.057)PT(0.073)S(0.073)DAT(0.022)T(0.005)S(0.001)LEMNNPHAIPR;KAETDKIVVGSSVAPGNTAPS(0.068)PS(0.358)S(0.358)PT(0.068)S(0.068)PT(0.014)S(0.014)DAT(0.014)T(0.018)S(0.02)LEMNNPHAIPR 155.53 4.0868000000000006e-53 16754200.0 496.03 715.11 801.1800000000001 902.95 1209.29 1110.85 769.15 1042.51 873.74 940.21 1193.38 True False 546.386600442014 775.3748293787636 855.5528926867199 958.7231707517619 1124.3536422240202 1101.8036059011438 798.4204241450299 1021.7163202167256 837.0197463126965 880.8449801427571 1046.6018254591095 0.5220577560165561 0.7408498729100079 0.8174578639889313 0.9160343001802065 1.0742897775195486 1.0527438220526886 0.7628693211907874 0.9762225665606236 0.7997499392335989 0.841623775838877 1.0 10.031496965045438 -5.409207426758881 1.385473882453588 0.9204449015093672 0.42853797963911283 0.6215087950839331 0.09508414775357195 0.5344167098828597 1.096323056869207 0.015220328527117863 0.33712500826617714 3.897557879266659e-06 5.409207426758881 -0.49190692187025437 KAETDKIVVGSSVAPGNTAPSPSS(ph)PTSPTSDATTSLEMNNPHAIPR ddPTM_A549_PD325901_60min_R1 1 KAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPR 46 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8 P49757-4 NUMB Protein numb homolog 1 KAETDKIVVGSSVAPGNT(0.001)APS(0.019)PS(0.294)S(0.357)PT(0.098)S(0.098)PT(0.049)S(0.049)DAT(0.011)T(0.011)S(0.011)LEMNNPHAIPR 81.517 3.6386e-08 8605700.0 423.52 359.15 496.24 343.28 388.3 442.93 544.15 418.69 454.76 407.52 334.94 True False 466.5154386210547 389.4168309370348 529.9178305335353 364.4836259545542 361.02714756227806 439.32292493297336 564.8579260203051 410.3388994940492 435.6480186704994 381.7891176522015 293.7445033595955 1.5881673811269819 1.325699124522236 1.8040093498696776 1.2408185405544812 1.2290515854191717 1.4955953895592182 1.9229565815187988 1.3969245204623333 1.4830848362707532 1.2997319551025734 1.0 8.19841804553731 -10.510738854071628 0.7305814406518183 0.9836533034064907 1.4990867291252326 0.23288104316385083 0.22169387373179117 0.5444874432537629 0.49955837662145186 0.1610846169547888 0.040812974238320976 3.0850424617340014e-11 10.510738854071628 0.5154334257187418 KAFEEAEK ddPTM_A549_PD325901_60min_R1 1 KAFEEAEK 8 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 90.10799999999999 0.0026706 5028000.0 2994.3 2448.1 3176.3 3216.7 3923.9 4069.0 3646.7 3474.4 3969.7 2953.0 3304.9 False True 3298.2791317128435 2654.409978607697 3391.8628186435367 3415.3882533442547 3648.2988007201216 4035.863413072651 3785.4771640508084 3405.100366385927 3802.8673140036067 2766.5470760378685 2898.418251487217 1.137958308819113 0.915813298251791 1.1702461564693525 1.178362802398092 1.2587206138548608 1.3924365163660544 1.3060493122786643 1.1748133191745962 1.3120491882261316 0.9545023650807872 1.0 11.501050080318613 -5.893009736438543 8.161063576617027 1.1901376365160243 1.0276714341139184 0.19430383368718962 0.13166304767373235 0.3188805272371035 22.112417335376378 0.0199362076865514 0.06246111064933603 1.2793526220574081e-06 5.893009736438543 -0.16246620240210596 KAGAVTS(ph)TPNR ddPTM_A549_MK2206_60min_R1 2 KAGAVTSTPNR 11 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 KAGAVT(0.126)S(0.773)T(0.101)PNR;KAGAVT(0.077)S(0.528)T(0.395)PNR 50.563 0.010983 9662000.0 1767.82 2706.2 2492.6 1763.7 3138.8 2046.77 2111.9900000000002 1989.94 3456.5 3669.4 3421.5 True False 2066.1847969506325 2843.9340208852295 2846.088160945301 2195.806579175502 2677.0866779432163 2263.357842864032 2495.7112449586357 2272.0200889356624 2673.6082688962815 2840.479991491021 2571.8471214039096 0.803385543314391 1.1057943519336384 1.1066319367349058 0.8537858105566026 1.0409198337115229 0.8800514711887383 0.97039642216225 0.8834195742145906 1.0395673392269222 1.104451336882136 1.0 11.32858917159404 KAGAVTST(ph)PNR ddPTM_A549_PD325901_60min_R1 2 KAGAVTSTPNR 11 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 KAGAVT(0.067)S(0.376)T(0.558)PNR;KAGAVT(0.026)S(0.128)T(0.846)PNR 66.00399999999999 0.0033215000000000002 14311300.0 4768.4 4855.4 4213.9 4074.0 4820.1 4892.1 5107.1 5272.1 4901.799999999999 5201.700000000001 5071.7 True False 5252.484457689455 5264.581598027781 4499.880594239204 4325.641727274689 4481.552804442279 4852.260359570585 5301.453485212356 5166.943829617563 4695.79439246867 4873.263774272326 4447.913052155195 1.1808873950772063 1.1836071290730104 1.0116835786749088 0.9725104057910349 1.007563041788954 1.0909071968525705 1.1918968340992155 1.1616557628333064 1.0557298079811532 1.0956292798734075 1.0 12.118912871183365 -9.423520792631765 1.6146398826090413 1.0156276139226101 1.0943436040129113 0.029364556462524116 0.07771721682160418 0.47360213897771736 2.527183662397817 0.018590695635223555 0.015494019440013568 3.7711968929374787e-10 9.423520792631765 0.07871599009030117 KAGGT(ph)PR ddPTM_A549_MK2206_60min_R1 1 KAGGTPR 7 1 P16403 P16403 HIST1H1C Histone H1.2 1 KAGGT(1)PR 48.091 0.035748 48585000.0 11665.0 9061.2 8811.1 6646.9 4496.1 2737.8 2784.0 2586.3 2666.1 8447.3 9376.8 True False 13633.766818131442 9522.376376485576 10060.646471517743 8275.39079839068 3834.729645947656 3027.5121787954417 3289.8167633203007 2952.915945211565 2062.232606886845 6539.049063095358 7048.281773485364 1.9343390710371056 1.3510209555337875 1.4273899362770182 1.174100449491325 0.5440658828898364 0.42953903888810363 0.4667544330727702 0.4189554334107379 0.2925865726090395 0.9277508012937753 1.0 12.783055885578213 -6.47850507523282 1.882083471132675 0.5975002559369199 1.5941306353227442 0.7638950088573189 0.24396686380803584 0.15963856120319184 1.1063353222385826 0.04471239899264309 0.12683456820886 3.32272902195605e-07 6.47850507523282 0.9966303793858243 KAGGT(ph)PR ddPTM_A549_PD325901_60min_R1 1 KAGGTPR 7 1 P16403 P16403 HIST1H1C Histone H1.2 1 KAGGT(1)PR 54.066 0.026781 116110000.0 3290.0 3536.7 3728.4 4988.5 4622.8 2980.2 3273.1 3458.8 2934.4 3683.3 4218.8 True False 3623.9983780300076 3834.7501210497294 3981.431644690538 5296.628315294494 4298.110475794229 2955.93023928216 3397.659611609046 3389.81152062389 2811.077372650878 3450.735809404091 3699.9143451766336 0.9794816960436954 1.0364429452397657 1.07608751804779 1.431554306709669 1.1616783727432582 0.7989185595973693 0.9183076402939923 0.9161864855176967 0.7597682298552447 0.9326528907088397 1.0 11.85327615669576 -7.251917902397964 24.110436707511685 0.8835533399104806 1.14443442631309 0.5033763194292473 0.12321719059892518 300.31035521911474 760449.4573355437 0.020694919952711163 0.035528370476882565 5.59863426235145e-08 7.251917902397964 0.2608810864026093 KAGLAS(ph)PEEEDAVGKEPLK ddPTM_A549_MK2206_60min_R1 4 KAGLASPEEEDAVGKEPLK 19 2 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK 172.49 7.490399999999999e-35 68278400.0 11610.800000000001 13336.0 12720.199999999999 11002.0 16112.7 12131.7 11540.600000000002 11662.2 16677.3 17237.5 17029.0 True False 13570.419183194217 14014.7454373385 14524.115632213905 13697.490493898555 13742.54317436463 13415.468441629295 13637.377636053967 13315.352563989616 12899.918178175609 13343.536778036316 12800.229323509331 1.060170004788143 1.0948823714899036 1.1346762050222354 1.0700972730809817 1.0736169506842048 1.0480646949808934 1.065401040199108 1.0402432821679368 1.0077880522408442 1.042445134442172 1.0 13.64388203672207 -8.058034562874612 0.6482885392913943 0.9999944717157144 1.0940895605511904 0.5870972545261874 0.023111954276500018 0.21645757905976595 0.18747347468817985 0.004658421234816043 0.007384336237477939 8.749141433246248e-09 8.058034562874612 0.09409508883547602 KAGLAS(ph)PEEEDAVGKEPLK ddPTM_A549_PD325901_60min_R1 6 KAGLASPEEEDAVGKEPLK 19 2 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK 166.06 4.8031e-28 145993400.0 21518.100000000002 21305.699999999997 23904.7 23393.0 28119.000000000004 24986.0 23762.800000000003 26505.6 26903.9 23380.899999999998 24494.5 True False 23702.60167121201 23101.206111360654 25527.016692638626 24837.932480642306 26144.018445283793 24782.522300081895 24667.10635750312 25976.925014759046 25773.222643832465 21904.62598379065 21481.831783428726 1.1033789813723616 1.0753834377001839 1.1883072612238958 1.1562297261727237 1.2170292882309748 1.1536503287954871 1.1482776052893005 1.2092509277908914 1.1997683858465997 1.0196814780333618 1.0 14.390829398580037 -10.795219848695023 1.0120666027091545 0.9987897823789059 1.1636038881599482 0.6606853833537243 0.04167819402900631 0.2670177830438955 0.4798764031179141 0.031762229164363324 0.007726754168937224 1.6024340006710914e-11 10.795219848695023 0.16481410578104227 KAGNFYVPAEPK ddPTM_A549_PD325901_60min_R1 2 KAGNFYVPAEPK 12 1 P18124;A8MUD9;C9JZ88;C9JIJ5 P18124 RPL7 60S ribosomal protein L7 0 ; 91.914 0.00027125 12985400.0 6096.9 7836.200000000001 8013.200000000001 7555.0 9970.2 10188.599999999999 8493.7 8893.0 10639.9 8745.099999999999 9503.5 False True 6715.8527996994435 8496.584075146297 8557.023939286079 8021.6551913500925 9269.927547322754 10105.627419619566 8816.932401430982 8715.622138576462 10192.742004248928 8192.932893551897 8334.62974765008 0.8057769814661478 1.0194314963471387 1.026683151905902 0.9624488950588082 1.1122182781948264 1.2124866641459162 1.057867316051668 1.0457119755120257 1.2229387882674376 0.9829990223455176 1.0 13.024902395920144 -4.270029125916726 0.6608584284284741 1.1043365834689511 3.548470712189005e-11 0.44874157160987305 0.08228370551215991 6.734837928371862 0.7764778934387058 0.015380234367167829 7.62352078889752 5.369957815933111e-05 4.270029125916726 -1.1043365834334664 KAGSEPETSRPS(ph)PLGSYSPIR ddPTM_A549_MK2206_60min_R1 1 KAGSEPETSRPSPLGSYSPIR 21 2 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 KAGSEPET(0.017)S(0.017)RPS(0.403)PLGS(0.333)YS(0.23)PIR 56.298 0.001957 3551900.0 687.76 1019.3 795.33 933.0 1487.2 859.0 1071.3 919.08 1613.1 1538.9 1303.6 True False 803.8370738823903 1071.1780162176904 908.1197532875808 1161.585041883962 1268.4348500819278 949.8988098419477 1265.941342868188 1049.3624045644533 1247.7354255913767 1191.261421187533 979.8801424703005 0.8203422429358539 1.0931724909918328 0.9267661563160061 1.1854358421383857 1.2944795951106574 0.9694030613246543 1.2919348887678452 1.0709089398617533 1.2733551497898579 1.2157215658890028 1.0 9.936461481411946 -4.475045954677342 0.8464856494999986 1.138801394447683 1.451053895905711e-13 0.37702385070768407 0.1216757419830669 6.775496629164872 1.3635370529727033 0.020069882841633323 9.91031808109581 3.3492999681413323e-05 4.475045954677342 -1.138801394447538 KAGSEPETSRPSPLGSYS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 KAGSEPETSRPSPLGSYSPIR 21 2 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 KAGSEPETSRPS(0.008)PLGS(0.342)YS(0.649)PIR;KAGSEPETSRPS(0.002)PLGS(0.05)YS(0.948)PIR 121.49 1.4672e-15 52397000.0 4194.8 4899.6 4725.8 4784.1 6978.700000000001 5836.9 4829.5 4623.2 7651.0 8436.9 8116.5 True False 4902.7796869865215 5148.9687121163515 5395.989501322033 5956.204714766413 5952.142474627991 6454.556883779354 5706.957635939433 5278.552757956196 5918.060716136399 6530.998430318473 6100.949045995858 0.8036093483200434 0.8439619267916514 0.8844508388188391 0.9762751122590604 0.9756092748446193 1.057959480585332 0.9354212914931642 0.8652019084507168 0.9700229704459683 1.0704889323087958 1.0 12.574817966264353 -6.002295333161007 1.8714076951428755 0.9777971050104567 0.8142833300324644 0.587337743532965 0.052825914601836485 0.17789398267894832 1.1744745592606993 0.006810798000031415 0.030388243662797347 9.947287421760374e-07 6.002295333161007 -0.16351377497799224 KAGSEPETSRPSPLGSYS(ph)PIR ddPTM_A549_PD325901_60min_R1 3 KAGSEPETSRPSPLGSYSPIR 21 2 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 KAGSEPETSRPS(0.006)PLGS(0.13)YS(0.864)PIR;KAGSEPET(0.008)S(0.008)RPS(0.037)PLGS(0.152)YS(0.795)PIR;KAGSEPETSRPS(0.002)PLGS(0.328)YS(0.67)PIR 123.24 1.0116e-15 73258400.0 6569.880000000001 7447.4 7490.9 7057.4 9039.0 9610.5 8671.9 8710.6 7868.0 8337.1 8593.7 True False 7236.849381109975 8075.018534652578 7999.277520441029 7493.319569481688 8404.131822857154 9532.235274351122 9001.913899945761 8536.860249666499 7537.335321707029 7810.694083181616 7536.729379952698 0.960210857558401 1.0714221152920391 1.0613725287415368 0.9942402322967204 1.1150900343074148 1.2647708035937133 1.194405881666705 1.1327009129947132 1.0000803985022924 1.036350609053 1.0 12.879722875663909 -8.772080199663877 24.497097425934584 1.000037950306425 1.1027980556451098 0.1824575875718325 0.08079575241860142 180.00504734759144 414402.448194155 0.014961137537984061 0.016010543546830774 1.6901287925692919e-09 8.772080199663877 0.10276010533868485 KAGTATS(ph)PAGSS(ph)PAVAGGTQR ddPTM_A549_PD325901_60min_R1 1 KAGTATSPAGSSPAVAGGTQR 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 KAGT(0.02)AT(0.196)S(0.761)PAGS(0.195)S(0.819)PAVAGGT(0.009)QR 48.118 0.003653 5269000.0 933.05 818.53 1104.1 803.69 1374.8 1032.7 921.66 780.23 947.99 1070.8 1094.0 True False 1027.772549124894 887.5103957312845 1179.0308654926566 853.3321059875785 1278.238790802523 1024.290033590593 956.7342756517043 764.6677005714056 908.1492770240275 1003.1895052561285 959.4449354373853 1.0712157739999535 0.9250248377481842 1.2288676733231887 0.8894018556662319 1.3322690480614274 1.0675860549763043 0.9971747625261628 0.796989668013427 0.9465361100791329 1.0455936221069333 1.0 9.906056199268832 -7.811487601951949 4.318674087744582 0.9584169063215027 1.0877285935003465 0.2024155523729796 0.1286368671682877 0.2593894571267555 10.135616354537557 0.01865704396338588 0.026505283542300754 1.5435204864402428e-08 7.811487601951949 0.12931168717884378 KAGTATS(ph)PAGSSPAVAGGTQR ddPTM_A549_MK2206_60min_R1 2 KAGTATSPAGSSPAVAGGTQR 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KAGT(0.02)AT(0.258)S(0.72)PAGS(0.001)SPAVAGGTQR;KAGT(0.028)AT(0.34)S(0.632)PAGSSPAVAGGTQR 74.905 0.00011886 67351000.0 1079.07 1408.92 1679.94 1189.35 1807.81 1458.1 1198.27 1256.78 2246.69 2408.9 1981.4299999999998 True False 1261.1906352714186 1480.6280100161175 1918.1807530684598 1480.7408033919496 1541.8835437914256 1612.3951741915537 1415.9801483418871 1434.9324137273297 1737.8183022267008 1864.7278169462904 1489.3862463139976 0.8467854717959642 0.9941195668218668 1.2879001386078748 0.9941952982690393 1.03524760458031 1.0825903476562808 0.9507138607236508 0.9634387434948908 1.1668016315630243 1.252010901511415 1.0 10.54050222486877 -8.74359207026318 24.999407674640178 1.078767459216946 1.0269913496884748 0.1111623145602183 0.1204868665089872 710.5085139528003 995235.5013765934 0.01973715610812664 0.022356764879376885 1.804712098302421e-09 8.74359207026318 -0.051776109528471226 KAGTATS(ph)PAGSSPAVAGGTQR ddPTM_A549_PD325901_60min_R1 2 KAGTATSPAGSSPAVAGGTQR 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KAGT(0.004)AT(0.175)S(0.821)PAGSSPAVAGGTQR;KAGT(0.013)AT(0.175)S(0.811)PAGS(0.001)SPAVAGGTQR 99.836 4.5513000000000005e-08 138831000.0 6417.9 6150.299999999999 5716.8 7136.9 9465.9 9316.4 7261.8 7007.200000000001 8366.8 6211.1 7671.2 True False 7069.440483391736 6668.607365479726 6104.776425911078 7577.730103924085 8801.047839582203 9240.53032724257 7538.151772809434 6867.435898957947 8015.172492330747 5818.93008600704 6727.69103174339 1.0507974355593714 0.9912178389309364 0.9074103428809078 1.1263493029287373 1.3081825247408143 1.3735069407383311 1.1204664032937945 1.0207715940811186 1.191370479784611 0.8649223126554821 1.0 12.715895736211316 -6.284737538588318 22.507550776285182 1.12706120809649 0.9839495005009509 0.17829848261595027 0.1362680079145642 270.08304540249634 260917.98212309615 0.01862116450974754 0.043311844246651264 5.191136651653527e-07 6.284737538588318 -0.14311170759553904 KAGTATSPAGS(ph)SPAVAGGTQR ddPTM_A549_MK2206_60min_R1 1 KAGTATSPAGSSPAVAGGTQR 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KAGT(0.002)AT(0.002)S(0.006)PAGS(0.495)S(0.495)PAVAGGTQR 47.38 0.006490699999999999 8417300.0 514.53 292.49 235.44 306.8 436.97 277.04 336.31 295.97 321.58 390.95 557.34 True False 601.3700849492643 307.37649167420045 268.8289322847473 381.9660137727755 372.6922918506589 306.35618891573165 397.41317373284824 337.9246538701108 248.74264345773656 302.6341234734329 418.93709619852535 1.4354663036674313 0.7337055955735686 0.6416928334208795 0.9117502776401781 0.8896139664701547 0.7312701398268059 0.9486225434295812 0.806623851018377 0.5937469985705509 0.7223855949247833 1.0 8.710589827934974 -5.257356020959449 24.675016502255495 0.8063571405538742 1.4354666010448704 0.6895133641516651 0.12286779396358193 186.32512419719012 1125875.6829789607 0.021244161543395538 0.22434414057393737 5.528966760773448e-06 5.257356020959449 0.6291094604909963 KAGTATSPAGSS(ph)PAVAGGTQR ddPTM_A549_MK2206_60min_R1 1 KAGTATSPAGSSPAVAGGTQR 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KAGT(0.002)AT(0.002)S(0.002)PAGS(0.294)S(0.691)PAVAGGT(0.009)QR 41.93899999999999 0.03071 8581000.0 253.46 511.49 263.49 394.59 417.0 278.0 288.0 327.72 534.76 512.16 368.89 True False 296.2378514979505 537.52265624957 300.85684406943625 491.2645677138182 355.65985239655953 307.41777547853485 340.3258720676171 374.1753136004079 413.6377138362438 396.4627002894318 277.28443215393486 1.0683537088497403 1.938524467724764 1.0850116673784813 1.7716990596900586 1.2826535180277068 1.1086730441032169 1.2273529726280656 1.3494277723917942 1.4917451752452233 1.429805118194789 1.0 8.115222809813167 -10.881802028529469 1.0035535142163015 0.9881115782190338 1.3831237463793287 0.0 0.29270086918064775 0.6753271453427476 1.146273339823284 0.1990902674634719 0.042387886036727614 1.312798196655712e-11 10.881802028529469 0.39501216816029483 KAGTQIENIDEDFRDGLK ddPTM_A549_MK2206_60min_R1 1 KAGTQIENIDEDFRDGLK 18 2 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 89.26100000000001 2.1735e-06 2731300.0 883.44 1135.3 1164.1 978.45 1318.8 887.94 877.7 902.68 1548.7 1536.0 1228.0 False True 1032.5430739657122 1193.0819207416312 1329.186884440513 1218.1702939242894 1124.8062670037955 981.901221433131 1037.1667288671792 1030.6376543415606 1197.9219227657095 1189.01653320167 923.0537089241554 1.1186164618407413 1.2925379197405544 1.439988671937321 1.319717674222988 1.218570768016076 1.063753075189486 1.123625547289145 1.116552205334614 1.2977813871328467 1.288133639143817 1.0 9.850270784930924 -13.937596902665044 0.3087276806515341 2.7909282897314513e-12 1.2474593978982316 0.0 0.13745589944520165 20.94101715220519 0.5026461609183583 12.921862558885483 0.042297433547724764 1.1545243508180757e-14 13.937596902665044 1.2474593978954407 KAGTQIENIDEDFRDGLK ddPTM_A549_PD325901_60min_R1 2 KAGTQIENIDEDFRDGLK 18 2 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 ; 157.79 4.1417999999999996e-23 13363300.0 3497.0 3549.0 3829.2 4223.0 4257.8 3527.6 3832.3 4395.1 4547.8 3913.0 4331.8 False True 3852.0128656446627 3848.0866852165846 4089.0725388501796 4483.845118871137 3958.7468166125864 3498.872395172051 3978.1402736150244 4307.436282610752 4356.671781400509 3665.9325122032424 3799.0160615426557 1.0139501395212545 1.012916666547075 1.0763504214272106 1.180264849170023 1.042045296066758 0.9209943676182495 1.047150159191386 1.1338294476337758 1.146789513606691 0.9649689426989755 1.0 11.891410096127764 -8.033216037332512 24.126539371333482 1.0767780762960184 1.0424702773744496 0.0005708479424740842 0.07575751705604958 1289.1169192731882 936351.5884028221 0.013198020477756712 0.01704665696238819 9.263688917817071e-09 8.033216037332512 -0.034307798921568766 KAIGGEFSDTNAAVEGT(ph)PLPK ddPTM_A549_PD325901_60min_R1 1 KAIGGEFSDTNAAVEGTPLPK 21 1 E5RFM9;R4GMT7;O75410-7;H0YAY0;E7EVI4;E7ET87;O75410-3;E5RJU4;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 KAIGGEFSDTNAAVEGT(1)PLPK 109.68 2.5027e-10 1901900.0 1531.8 1745.3 1745.1 2279.9 2182.9 2260.0 2412.9 2610.9 2311.6 2254.0 2768.4 True False 1687.3072083484394 1892.3825561308831 1863.5329801387888 2420.724244971418 2029.580634596179 2241.595309300611 2504.724229889543 2558.8235512885744 2214.4514908055367 2111.682055329954 2427.904350333508 0.6949644487093009 0.7794304400298706 0.7675479389798884 0.9970426737111355 0.83593928826619 0.9232634345717513 1.0316404060750923 1.053922717728597 0.9120834972355273 0.8697550441144372 1.0 11.245495870993052 -5.861921843907675 0.7572481523452519 0.9684130680974257 0.6426004740040543 0.6341155017906988 0.0682783354100327 0.6159079924118877 0.4007850110867983 0.01052714216622397 0.14202928442672588 1.3742892713045446e-06 5.861921843907675 -0.3258125940933714 KAIS(ph)SANLLVR ddPTM_A549_MK2206_60min_R1 2 KAISSANLLVR 11 1 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 KAIS(0.968)S(0.032)ANLLVR;KAIS(0.751)S(0.249)ANLLVR 119.87 5.4709000000000004e-06 29362000.0 3035.3 4014.9 3728.2 3319.3 4958.200000000001 4545.1 3535.6000000000004 4169.5 6557.5 6404.8 5642.6 True False 3547.584434039806 4219.241260975581 4256.914820523254 4132.528649009041 4228.8553480878245 5026.059465206797 4177.97275445232 4760.539393558222 5072.236720175718 4957.9512316732125 4241.386692162412 0.8364208905062414 0.9947787285635254 1.0036610970627922 0.9743343271778242 0.9970454606042538 1.185003827756231 0.9850487724150987 1.1224016433953414 1.1958911290848862 1.1689458169034501 1.0 12.050320305779188 -4.61489009117802 0.5020452315289811 1.0925421612803117 0.5124055068693529 0.5171291932484552 0.07386222678976274 5.406421971060484 0.5706432292464225 0.01650250318587779 2.1360924037979743 2.4272242857275476e-05 4.61489009117802 -0.5801366544109587 KAIS(ph)SANLLVR ddPTM_A549_PD325901_60min_R1 1 KAISSANLLVR 11 1 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 KAIS(0.5)S(0.5)ANLLVR 118.08 6.806599999999999e-06 35287000.0 2590.0 3177.0 3090.8 3495.6 4170.6 3291.9 3686.3 3908.9 3744.8 3683.7 4475.9 True False 2852.934893342774 3444.73693968247 3300.5602744902694 3711.5152729163956 3877.6714437889173 3265.0918578259666 3826.5841637207627 3830.9339230272703 3587.419078892791 3451.1105533358236 3925.392675067816 0.7267896818229749 0.8775521902717562 0.8408229565041536 0.9455143931179508 0.9878429407630984 0.8317873211931741 0.9748283752668524 0.9759364833382144 0.9139006911788293 0.8791758784428366 1.0 11.93862126529992 -3.8603315830834948 0.491562303292939 0.9591089878092 7.761995665209009e-12 0.5455670948509093 0.053842865440343224 6.928932511522151 0.3929489227737787 0.009549869496401164 5.257594293438407 0.00013793307458426785 3.8603315830834948 -0.9591089878014379 KAISS(ph)ANLLVR ddPTM_A549_PD325901_60min_R1 1 KAISSANLLVR 11 1 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 KAIS(0.367)S(0.633)ANLLVR 73.877 0.00061 33771000.0 1947.2 2181.7 1669.5 2346.8 2268.6 2894.0 2210.8 2633.7 2958.7 2586.1 2859.7 True False 2144.8783105471225 2365.559515676815 1782.802309519058 2491.756506030496 2109.261362245129 2870.4322235026425 2294.933203796181 2581.1687874023187 2834.3561281564043 2422.813204653414 2507.9750291318906 0.8552231523969956 0.9432149396222772 0.710853293517901 0.9935332198634337 0.8410216759515456 1.1445218513583897 0.91505424780507 1.029184404717045 1.130137300106009 0.9660435915472593 1.0 11.29230726855685 -7.249271033799549 24.99697004401866 1.053187324666484 0.8710633421384991 0.42881794185287836 0.09113851172481402 491.68437547291 1010048.2581409817 0.012942843706518619 0.022310166915201227 5.6328601148534304e-08 7.249271033799549 -0.1821239825279849 KAKPAMPQDSVPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KAKPAMPQDSVPSPR 15 2 P53396 P53396 ACLY ATP-citrate synthase 1 KAKPAMPQDS(0.146)VPS(0.854)PR;KAKPAMPQDS(0.174)VPS(0.826)PR 60.034 0.0022177 19158200.0 1924.06 2227.2599999999998 1763.96 1583.06 2771.3 2184.2 2161.2 1953.63 2755.1 3286.8999999999996 3246.8999999999996 True False 2248.7942892493775 2340.6180206033696 2014.1160524677332 1970.909771066263 2363.645441118913 2415.3305942453817 2553.8620649740765 2230.563035240951 2131.0742489906397 2544.387007148807 2440.6051201187643 0.921408494439259 0.959031840631995 0.8252527358336946 0.8075496338262025 0.9684669681443157 0.9896441560066248 1.04640527216865 0.9139385215796023 0.8731745383238964 1.0425230145485362 1.0 11.253023176532169 -6.797741083778547 24.999805400099834 0.9504325952208916 0.8802864497177663 0.3024979518756943 0.06433080298060742 222.22829356405205 153040.79668374098 0.010151380262169565 0.019184722389718606 1.5931582477001562e-07 6.797741083778547 -0.07014614550312537 KAKPAMPQDSVPS(ph)PR ddPTM_A549_PD325901_60min_R1 3 KAKPAMPQDSVPSPR 15 2 P53396 P53396 ACLY ATP-citrate synthase 1 KAKPAMPQDS(0.012)VPS(0.988)PR;KAKPAMPQDS(0.01)VPS(0.99)PR;KAKPAMPQDS(0.006)VPS(0.994)PR 68.12899999999999 0.00056104 39819500.0 3753.1000000000004 3735.8 4175.8 4027.37 5039.7 4580.4 4561.9 4261.45 4419.2 4795.0 4313.11 True False 4134.111949113808 4050.628976791239 4459.194899125297 4276.131498079102 4685.728858021148 4543.098741026778 4735.505600867467 4176.4520367071445 4233.476392181964 4492.242881680179 3782.6248130569843 1.0929214906124312 1.0708513735777203 1.1788625939672648 1.130466728637378 1.2387506267729225 1.2010439748993254 1.251909939500555 1.1041147994087954 1.1191901394948598 1.187599379714772 1.0 11.885171971653348 -9.90826287644962 0.7091643264129991 1.0078777711719271 1.1615952686687772 0.0 0.07644157562741959 0.3949511633587754 0.40715659751065475 0.02884519179860101 0.012973203248595366 1.2351995465246708e-10 9.90826287644962 0.15371749749685004 KAKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KAKSPK 6 2 P10412 P10412;REV__P78345 HIST1H1E Histone H1.4 1 KAKS(1)PK 41.18899999999999 0.050263999999999996 25179000.0 7047.5 5177.7 4738.8 5412.4 4161.1 3304.7 7299.9 3372.9 3050.0 5577.7 7836.2 True False 7762.957011904712 5614.042950139731 5060.403464719321 5746.711655547746 3868.838691015698 3277.7876188697937 7577.701689158553 3305.624863511137 2921.8191066607046 5225.523070103761 6872.397077764562 1.129585052211481 0.8168973484235655 0.736337468201904 0.8362019235094931 0.5629533112301108 0.47694968462677734 1.102628617557036 0.48100027197299017 0.4251528358444485 0.7603639619443392 1.0 12.746597680505731 -4.705176828497465 1.176272691860351 0.7084038025513777 2.0752946457130794 0.2610595412418928 0.2057221952551615 6.332357206387511 2.8827822827261933 0.03631982921290223 14.62063412456134 1.971619802695823e-05 4.705176828497465 1.3668908431617017 KALAAAGYDVEK ddPTM_A549_MK2206_60min_R1 1 KALAAAGYDVEK 12 1 P10412;Q02539;P22492;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2 0 109.22 0.00010289 3399200.0 2385.1 2322.7 2727.7 2759.7 3450.9 2353.2 2688.3 2187.6 3964.1 3495.3 3293.9 False True 2787.646569903583 2440.91550894617 3114.5288761175048 3435.8266238876395 2943.277181379588 2602.2140620722603 3176.729312081163 2497.698999244026 3066.2376793669173 2705.7093024087226 2475.9337229847547 1.125897088449951 0.9858565624299628 1.257920939968829 1.3876892551654119 1.1887544299172303 1.0510031176986732 1.2830429516714181 1.0087907346053806 1.2384167035257097 1.092803606692255 1.0 11.27375698095862 -10.94420251055043 1.0710463503311034 0.9947411280945466 1.1751879988533729 0.12056983791165932 0.11933235584707508 0.6722513553299991 1.3017536848250033 0.09556886204798831 0.019782078558096973 1.1370969364117206e-11 10.94420251055043 0.18044687075882626 KALAAAGYDVEK ddPTM_A549_PD325901_60min_R1 2 KALAAAGYDVEK 12 1 P10412;Q02539;P22492;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2 0 ; 124.3 6.4842e-06 15517800.0 6744.2 7581.1 6817.5 8046.799999999999 8689.599999999999 7865.1 7631.099999999999 8866.0 8997.4 8334.1 8931.9 False True 7428.866219182364 8219.985902872768 7280.176546957874 8543.832560391247 8079.272473492582 7801.049233265591 7921.505686398149 8689.160674757548 8619.27056730133 7807.883503693595 7833.332923979138 0.9483659498808439 1.04935995733183 0.9293842886049232 1.090702085984007 1.0313965398764786 0.9958786775658773 1.0112560979183074 1.1092546121917757 1.100332470348133 0.9967511376661091 1.0 12.935410560226234 -5.763238676470269 0.6565839719237154 1.0489559825094081 0.9511534990700403 0.157016839822536 0.051927724422089205 2.5965862037854395 1.1065634175690733 0.009475658463488891 0.16618985176772808 1.7248896788651665e-06 5.763238676470269 -0.09780248343936782 KALAS(ph)PSSK ddPTM_A549_PD325901_60min_R1 2 KALASPSSK 9 1 A0A0A0MTQ1;Q96GE4-2;Q96GE4;K7ENV0 A0A0A0MTQ1 CEP95 Centrosomal protein of 95 kDa 1 KALAS(0.651)PS(0.299)S(0.05)K;KALAS(0.642)PS(0.174)S(0.185)K 42.095 0.034134 5817100.0 4343.5 4254.2 4475.6 4522.0 5620.1 5726.3 4145.4 4457.299999999999 5344.3 5437.4 5229.2 True False 4784.448922484299 4612.716364116201 4779.341129969148 4801.313669792869 5225.363564292452 5679.666911348712 4303.15546544992 4368.395654815794 5119.697656303873 5094.081636047508 4586.041550629959 1.043263317539521 1.0058165224173727 1.0421495481899061 1.0469407258495815 1.139406066561842 1.2384682625844348 0.9383158477617412 0.9525416650914844 1.1163653010515375 1.1107796516470207 1.0 12.163033710801079 -11.165721088051646 1.5580091751041727 0.9999623917063 1.0655928956753995 0.0 0.08710931156932729 0.922841252693606 4.016235743449177 0.06176246049330721 0.01304828045434616 6.8277704541416775e-12 11.165721088051646 0.06563050396909953 KALDS(ph)NSLENDDLSAPGREPGHFNPESR ddPTM_A549_MK2206_60min_R1 1 KALDSNSLENDDLSAPGREPGHFNPESR 28 2 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 KALDS(0.751)NS(0.248)LENDDLS(0.001)APGREPGHFNPESR 45.751000000000005 0.004535 4382600.0 1871.2 1530.2 1831.7 1317.6 2017.8 1604.5 1283.3 1583.8 2591.6 2313.7 2184.6 True False 2187.0128135522964 1608.0806439873538 2091.462603066479 1640.4120591493124 1720.9842929634965 1774.2871250190976 1516.4589986957405 1808.308500184076 2004.6067379347899 1791.0335630655622 1642.103528107256 1.3318361334215763 0.9792809140608095 1.2736484437599191 0.9989699376872461 1.048036413969076 1.080496506249031 0.9234856223977927 1.101214673272393 1.2207553930813164 1.0906946683988725 1.0 10.681329370839054 -5.244138578232528 23.975641234838164 1.0877319737528877 1.331836484647284 0.3522900333231479 0.09926682117390587 1995.3125040843456 2765049.5423366963 0.014811031980006582 0.5746552409484613 5.699823686283145e-06 5.244138578232528 0.24410451089439644 KALDSNS(ph)LENDDLSAPGREPGHFNPESR ddPTM_A549_PD325901_60min_R1 2 KALDSNSLENDDLSAPGREPGHFNPESR 28 2 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 KALDS(0.002)NS(0.998)LENDDLSAPGREPGHFNPESR;KALDS(0.085)NS(0.914)LENDDLSAPGREPGHFNPESR 183.65 6.898799999999999e-67 25021000.0 4286.1 4369.6 3942.2 4005.8999999999996 4456.6 4832.700000000001 4355.2 4721.700000000001 5296.6 4853.1 6123.6 True False 4721.221716739946 4737.841527112534 4209.74139837438 4253.33534494101 4143.583790435354 4793.344093476578 4520.939519256885 4627.521989398006 5074.002321422652 4546.674437764776 5370.43602069869 0.879113297047661 0.8822079825273003 0.7838732985830628 0.791990692850234 0.7715544463178012 0.8925428168219695 0.8418198265154482 0.8616659748971309 0.9448026755865769 0.8466117872442797 1.0 12.39082350869461 -8.816818094111243 0.8973040912653659 0.9867931989247227 0.8264116399314988 0.23144865015313376 0.05751491178692092 0.187130527062662 0.30654051004464594 0.00986106280775916 0.00996858809140165 1.5246912427734243e-09 8.816818094111243 -0.16038155899322393 KALEIS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KALEISPR 8 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 KALEIS(1)PR;KALEIS(1)PR 81.865 0.0015237 9996000.0 2033.87 2245.5 1827.8899999999999 1515.3 2923.4 2194.8999999999996 1934.54 1890.4499999999998 3104.8 2726.3 2643.8 True False 2377.1375326526336 2359.7863586940293 2087.1122877759385 1886.548568024402 2493.3717326045626 2427.162861143297 2286.020876908639 2158.427076760315 2401.5677573467888 2110.426936502418 1987.2714948319897 1.196181567961153 1.187450413710852 1.0502401373962191 0.9493159706313288 1.2546709088761725 1.2213544387142217 1.1503314382828735 1.0861259180607303 1.2084749182948578 1.0619721271052802 1.0 10.956573267210002 -10.957500248280336 1.1867510772126586 0.9989612495198479 1.14777325318953 0.19910985152572258 0.08542612396013258 0.521885721743475 1.2915438143480573 0.06404789295037126 0.014452429148066052 1.1028076033890411e-11 10.957500248280336 0.14881200366968206 KALEIS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KALEISPR 8 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 KALEIS(1)PR;KALEIS(1)PR 90.685 0.0010995999999999998 17127300.0 2730.4 2500.4 2656.4 2758.7 3209.6 2851.0 2999.6 3174.1000000000004 3273.0 3504.8 3046.1 True False 3007.588197985756 2711.1174831545636 2836.67927823086 2929.0986335377224 2984.1687685188963 2827.782401246036 3113.7514194441032 3110.7900854667214 3135.447192164094 3283.506329867089 2671.449010818846 1.1258265405050263 1.0148490471557077 1.0618504290154382 1.096445644919834 1.1170599762277311 1.058520072737331 1.1655664797770868 1.1644579675182383 1.1736878298878795 1.2291106124689375 1.0 11.38340676577905 -6.263977054865302 10.425180192035235 1.0971121927143723 1.0622311162078704 0.015433003693378522 0.06749874620666312 0.3542104570468331 1024.2512473678996 0.010324362729204435 0.025356802938965414 5.445314213791617e-07 6.263977054865302 -0.03488107650650196 KALEVEESNS(ph)EDEASFK ddPTM_A549_PD325901_60min_R1 2 KALEVEESNSEDEASFK 17 1 Q03111 Q03111 MLLT1 Protein ENL 1 KALEVEES(0.036)NS(0.964)EDEASFK;KALEVEES(0.012)NS(0.988)EDEASFK 100.94 7.2039e-09 10056700.0 5274.0 5492.8 5023.1 5825.6 7889.4 5761.6 5438.3 6576.8 6918.6 7130.0 7007.9 True False 5809.412597486406 5955.697532983276 5363.997772354106 6185.434081102458 7335.275760952449 5714.679439852391 5645.257482451949 6445.620564600212 6627.835302079598 6679.810583186589 6145.972726738256 0.9452389159184463 0.9690406706611011 0.8727662830356955 1.006420684913313 1.193509325064215 0.9298250568198083 0.918529536893659 1.0487551525502754 1.0784029797667312 1.086859782850297 1.0 12.58542564952873 -6.505276324581774 24.723879557610413 1.0329657475929235 0.9341137510840781 0.2836459339242555 0.0744190923978897 678.5143420766254 953021.7175259155 0.010441213667255006 0.023786612116966782 3.1240909977964527e-07 6.505276324581774 -0.09885199650884535 KALPAS(ph)ETPK ddPTM_A549_MK2206_60min_R1 2 KALPASETPK 10 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KALPAS(0.564)ET(0.436)PK;KALPAS(0.568)ET(0.432)PK 53.528 0.0087835 4107300.0 1719.7 2305.7 2166.1000000000004 2048.05 2631.3999999999996 1884.47 2088.59 1762.25 2949.5 2721.6000000000004 2860.5 True False 2009.9433173716782 2423.0502815590417 2473.2855514015932 2549.822341940459 2244.324545794502 2083.8833645900536 2468.059767853142 2012.0543341642829 2281.4429593836485 2106.788669766709 2150.1589042162454 0.934788267709136 1.1269168417309454 1.150280356745601 1.1858762331195678 1.043794736004677 0.9691764457518781 1.1478499393758876 0.9357700634212879 1.061057838520664 0.9798292887262928 1.0 11.070227568594659 -6.976943226775704 24.836699012407713 1.027080426529602 1.1062783614364076 0.18863323207617733 0.07891480363949983 272.20635855816846 293218.3400521003 0.010604286340785286 0.02003949423975018 1.0545247403176603e-07 6.976943226775704 0.07919793490680549 KALPASET(ph)PK ddPTM_A549_PD325901_60min_R1 2 KALPASETPK 10 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KALPAS(0.031)ET(0.969)PK;KALPAS(0.003)ET(0.997)PK 111.95 9.075600000000001e-05 80340000.0 8561.3 9118.2 8166.9 8270.3 10279.900000000001 8889.0 8970.2 10138.3 8653.9 9561.1 9968.8 True False 9430.43687350405 9886.622714325686 8721.154945559261 8781.13764778592 9557.875287729757 8816.610931138553 9311.565869681785 9936.083653157504 8290.206677747894 8957.410514292462 8742.700797429798 1.0786640298014585 1.130843081949251 0.9975355611075161 1.004396450392929 1.093240579677576 1.0084539246419693 1.0650674300119276 1.1365004800437115 0.948243211089309 1.0245587401236222 1.0 13.093863310973063 -8.783207383434839 24.999997650124637 0.9755592888049127 1.061454738853133 0.29966797009540136 0.04829929112464217 169.5092957287462 194676.14447316434 0.008257551353024917 0.008794542836535022 1.6473755521873406e-09 8.783207383434839 0.0858954500482203 KALVVPEPEPDS(ph)DSNQER ddPTM_A549_MK2206_60min_R1 1 KALVVPEPEPDSDSNQER 18 1 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 KALVVPEPEPDS(0.768)DS(0.232)NQER 59.428999999999995 0.0017211 50841000.0 2847.6 3651.5 3080.8 3239.9 4200.9 3195.0 3046.6 3962.6 5217.5 4749.0 4769.7 True False 3328.205262864217 3837.345753182477 3517.7037656424122 4033.6756454446404 3582.9531748985773 3533.092779330646 3600.1277841708416 4524.310684953544 4035.7445806354276 3676.1976016762555 3585.2518529768286 0.9283044537305835 1.0703141398550104 0.9811594582181636 1.1250745584568866 0.9993588517146034 0.9854517685827636 1.0041492011730393 1.261922696224818 1.125651626756585 1.0253666276258708 1.0 11.807858752063018 KALVVPEPEPDSDS(ph)NQER ddPTM_A549_MK2206_60min_R1 1 KALVVPEPEPDSDSNQER 18 1 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 KALVVPEPEPDS(0.13)DS(0.87)NQER 126.32 1.6281e-11 44697000.0 5377.8 6142.2 5004.1 4367.1 6850.7 5239.0 4277.7 5096.3 7313.2 8009.6 7585.6 True False 6285.4411654133955 6454.811744542627 5713.756626087767 5437.039696046569 5842.971105067414 5793.387502633258 5054.902718554328 5818.716131764182 5656.771876780642 6200.2257970912115 5701.886168090456 1.10234420332498 1.1320485106605214 1.0020818475934756 0.9535510769180117 1.0247435555214193 1.0160475554659216 0.8865316790859751 1.0204897046748396 0.9920878302407565 1.0873990841468602 1.0 12.477223522399779 -5.7904575710251605 7.058143195429407 0.9909944344167416 1.1173852151311754 0.47806208727341426 0.04754694276225265 0.06879227239453758 11.757876415117153 0.004836561697103256 0.015773481164670526 1.6201022642095893e-06 5.7904575710251605 0.12639078071443377 KALVVPEPEPDSDS(ph)NQER ddPTM_A549_PD325901_60min_R1 2 KALVVPEPEPDSDSNQER 18 1 C9J0A5;C9JXC9;Q5VTR2 C9J0A5 RNF20 E3 ubiquitin-protein ligase BRE1A 1 KALVVPEPEPDS(0.039)DS(0.961)NQER;KALVVPEPEPDS(0.039)DS(0.961)NQER 167.61 1.545e-30 200123000.0 11255.2 13124.8 13422.3 12926.2 15072.0 14796.099999999999 14834.5 15985.0 13339.400000000001 15909.9 15841.3 True False 12397.819618359685 14230.872957489602 14333.217992846749 13724.622016469833 14013.39471557728 14675.605467231313 15399.035015249878 15666.166635010088 12778.791407013061 14905.346198799476 13892.920526274449 0.8923839731835209 1.0243255138886034 1.0316922180429668 0.9878860237135649 1.0086716244489407 1.056336962374228 1.1084087745357103 1.1276366697255666 0.9198059819636675 1.0728734948573495 1.0 13.762062289586897 -8.798578748909804 24.999995767223567 0.9621306132268032 1.030978425813592 0.0 0.06946456129939965 206.37072510224343 138915.46563418466 0.011408476027832685 0.012145383043909868 1.5900883332187707e-09 8.798578748909804 0.06884781258678874 KANDES(ph)NEHSDVIDS(ph)QELSK ddPTM_A549_PD325901_60min_R1 1 KANDESNEHSDVIDSQELSK 20 1 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 2 KANDES(0.999)NEHS(0.001)DVIDS(1)QELSK 124.97 2.588e-15 14044000.0 2391.0 2806.0 2830.5 2765.3 2536.6 2702.4 2836.4 2744.1 2773.2 2667.7 3311.4 True False 2633.732559838831 3042.471467657856 3022.5947511792115 2936.1063005480346 2358.437966794937 2680.3925503778655 2944.340754137634 2689.3667727951947 2656.6520480627764 2499.2609667274696 2904.118792694111 0.9068956016759747 1.0476401569081122 1.0407958375474 1.011014531476603 0.8121010658131675 0.9229624342919189 1.0138499711322793 0.9260526048592889 0.9147876645907576 0.8605918507930386 1.0 11.503884752501765 KANDES(ph)NEHSDVIDSQELSK ddPTM_A549_MK2206_60min_R1 2 KANDESNEHSDVIDSQELSK 20 1 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 KANDES(1)NEHSDVIDSQELSK;KANDES(0.992)NEHS(0.008)DVIDSQELSK 199.75 1.6499000000000002e-55 36061000.0 4665.7 5744.200000000001 5102.700000000001 4832.6 6687.6 5219.8 5434.5 4716.9 8425.599999999999 6808.700000000001 9461.5 True False 5453.1560945868705 6036.555244538077 5826.339588724859 6016.587216943661 5703.862899010154 5772.155771377182 6421.878304692591 5385.535019900415 6517.215052918419 5270.609941152483 7111.948425884285 0.7667597918370501 0.8487906383808603 0.819232542170808 0.8459829650965967 0.80201128543771 0.8116138399385937 0.9029703141996713 0.7572516977625282 0.916375465997292 0.7410922612950679 1.0 12.796029146795073 -9.297709750287941 0.7876102485938 0.9873817488003177 0.8189913498859169 0.0 0.08537017550281703 0.1931651614539396 0.25843856777224783 0.012610651985525745 0.009401797411479337 5.03837223132504e-10 9.297709750287941 -0.16839039891440077 KANDES(ph)NEHSDVIDSQELSK ddPTM_A549_PD325901_60min_R1 3 KANDESNEHSDVIDSQELSK 20 1 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 KANDES(1)NEHSDVIDSQELSK;KANDES(1)NEHSDVIDSQELSK;KANDES(0.996)NEHS(0.004)DVIDSQELSK 232.87 2.1941e-76 53077900.0 7872.5 6990.0 8072.299999999999 9450.9 8559.900000000001 9038.2 7635.7 8205.4 9476.9 9789.800000000001 9736.199999999999 True False 8671.710404571804 7579.071831407136 8620.134820683248 10034.66062844878 7958.682154051882 8964.595895805658 7926.280741915369 8041.73685998823 9078.618849807486 9171.670357262285 8538.709122856912 1.015576275031886 0.8876133057535638 1.009536066477352 1.1751964476208026 0.9320708832612205 1.0498771848087327 0.9282762333123448 0.941797728940273 1.0632308372591488 1.0741284455645674 1.0 13.059802265184722 -8.780549898950271 24.999791074520026 1.029858999293468 0.9934134000468321 0.07955428654950292 0.07556634271808328 648.5244722128114 848377.1992632841 0.013039644708089685 0.013892287060206492 1.6574868863349726e-09 8.780549898950271 -0.03644559924663582 KANNSQEPS(ph)PQLASSVASTR ddPTM_A549_MK2206_60min_R1 3 KANNSQEPSPQLASSVASTR 20 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 KANNSQEPS(1)PQLASSVASTR;KANNS(0.005)QEPS(0.985)PQLAS(0.007)S(0.003)VASTR;KANNS(0.003)QEPS(0.994)PQLAS(0.002)S(0.001)VASTR 79.875 9.259700000000001e-05 25466000.0 7233.5 7182.3 7314.4 6636.9 9907.4 7502.0 7926.799999999999 8095.4 12004.4 11911.9 11013.5 True False 8454.33795790431 7547.848391916338 8351.691905808517 8262.940797941757 8450.03458425342 8295.85666057543 9366.996953838849 9242.94774112273 9285.422567087666 9220.99351682615 8278.543992863344 1.021234889274311 0.9117362181590248 1.008835842753053 0.9981152247381861 1.0207150667482003 1.0020912696395659 1.1314787916708329 1.116494367740362 1.1216250798561098 1.1138424250418022 1.0 13.015161337533272 -7.6038067863546495 9.69138504642148 1.0692989408307367 0.9911575593142694 0.5115352033119323 0.04677471396312712 0.32604599739126705 36.33074353854969 0.008885955874496513 0.013183678935268402 2.489964834497665e-08 7.6038067863546495 -0.07814138151646732 KANNSQEPS(ph)PQLASSVASTR ddPTM_A549_PD325901_60min_R1 2 KANNSQEPSPQLASSVASTR 20 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 KANNS(0.004)QEPS(0.996)PQLASSVASTR;KANNSQEPS(1)PQLASSVASTR 111.3 1.4473e-10 64553000.0 6822.9 6399.9 7251.5 7823.1 8851.8 8421.2 8045.9 7891.6 10403.900000000001 8599.5 9975.5 True False 7515.555785246487 6939.2420334510025 7743.630396811883 8306.315119450814 8230.080105052208 8352.62053923996 8352.091127385418 7734.195847159562 9966.660263536829 8056.526102400146 8748.576739904598 0.8590603944714833 0.7931852505561577 0.8851303048518868 0.9494475920367126 0.9407336015597384 0.9547405009481628 0.954679986893102 0.8840518951936291 1.1392321928292892 0.920895631589099 1.0 13.094832616201883 -7.193316144997331 0.5216131056316032 1.0590479947674583 0.8241397304488789 0.22942921633849955 0.07397268096459593 0.6259425077689503 0.3068034599899334 0.018349920273997088 0.0637401840884575 6.407429774390049e-08 7.193316144997331 -0.23490826431857936 KAPAEGVLT(ph)LR ddPTM_A549_MK2206_60min_R1 2 KAPAEGVLTLR 11 1 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 KAPAEGVLT(1)LR;KAPAEGVLT(1)LR 118.16 9.958099999999999e-06 64239000.0 12159.400000000001 9725.900000000001 10023.1 9805.900000000001 13353.7 9389.9 8487.0 9787.400000000001 14177.599999999999 14407.8 12098.6 True False 14211.60945121195 10220.906767322325 11444.526296225162 12208.34594020358 11389.388419539422 10383.532985488837 10028.978042492588 11174.793922655412 10966.396236974955 11153.067973348325 9094.183715626861 1.562714136376158 1.1238949076605276 1.2584445898711747 1.3424344968120165 1.2523816073749015 1.141777350247108 1.1027903499749445 1.2287847125249256 1.2058692214597562 1.2263957186375738 1.0 13.150728433559433 -4.737072149071566 0.028976169989029944 5.729197829712171e-14 2.694386246835069 0.2694441771265217 0.11886009414909716 401.0099008838754 1.4827607628645891 53.01859961602226 88.72233110356946 1.83201004640197e-05 4.737072149071566 2.6943862468350117 KAPAEGVLT(ph)LR ddPTM_A549_PD325901_60min_R1 2 KAPAEGVLTLR 11 1 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 KAPAEGVLT(1)LR;KAPAEGVLT(1)LR 119.31 8.691e-06 69013000.0 6835.2 7429.200000000001 7384.5 7823.1 8313.3 7676.6 7217.3 7704.599999999999 8530.3 7146.6 8166.2 True False 7529.104472191706 8055.284756779669 7885.656576605859 8306.315119450814 7729.402487328064 7614.084314768615 7491.958300958097 7550.925708858224 8171.801155917318 6695.3624563536105 7161.809169806917 1.0512852679645877 1.1247555702460639 1.1010704683183365 1.1598068201075444 1.0792527843263449 1.0631509628696083 1.0460985657846118 1.0543321568370967 1.141024699508662 0.9348702677781789 1.0 12.80610836246028 -6.985183323963426 24.37154757623936 1.0654404787432268 1.1109775111521343 0.1862486115856301 0.05541759377180008 287.207905464673 472416.06586533267 0.0077944948307152985 0.014725498046647618 1.0347053056869773e-07 6.985183323963426 0.045537032408907496 KAPAGPSLEETSVS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 KAPAGPSLEETSVSSPK 17 1 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KAPAGPSLEETS(0.004)VS(0.803)S(0.192)PK 227.08 4.7525999999999996e-64 98510000.0 8066.1 7076.2 7949.5 7759.4 9509.4 7269.2 8877.6 8683.6 9176.0 7900.9 8183.9 True False 8884.964534051027 7672.5362079260585 8489.000874226856 8238.680515124011 8841.492549649052 7210.002045295576 9215.441926009125 8510.398785847583 8790.364630399548 7402.035825623969 7177.332182016464 1.2379202061057184 1.0689955561971032 1.1827515654767815 1.1478750469104473 1.2318633616822574 1.00455181151584 1.2839648064637934 1.1857328837546706 1.2247398347292189 1.031307404744415 1.0 12.809231977875378 -10.855840982437048 1.0808346313151371 0.9991328291904149 1.1744040015330934 0.3914672935883263 0.075994367637626 0.3800338883202023 0.7818016662770528 0.050581517300383294 0.012073134145028648 1.3936670027561165e-11 10.855840982437048 0.17527117234267853 KAPAGPSLEETSVSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KAPAGPSLEETSVSSPK 17 1 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KAPAGPSLEETS(0.002)VS(0.25)S(0.748)PK;KAPAGPSLEETS(0.009)VS(0.247)S(0.744)PK 184.35 1.2865e-39 102019000.0 7239.1 7525.799999999999 8253.5 6514.700000000001 9927.400000000001 6702.400000000001 6789.4 6173.4 10227.6 9589.599999999999 8485.8 True False 8460.883100997455 7908.83107470921 9423.970406949386 8110.801792455998 8467.092610747264 7411.64351930695 8022.946096582917 7048.498355244588 7911.064930121111 7423.302699733549 6378.541663834369 1.3264604273057796 1.2399121133834423 1.4774490633779604 1.2715762034515434 1.3274339272179956 1.1619652124137019 1.2578025698369488 1.10503289415021 1.2402623275122557 1.1637930879754006 1.0 12.639010900682214 -14.999999999909766 0.11137581481397278 0.09313897259612848 1.4332908101815645 0.45845606288546403 0.08878160511278588 38.46816317129408 0.3027488213296492 7.9381701458095915 0.36247473008931125 1.0000000002077705e-15 14.999999999909766 1.340151837585436 KAPAGPSLEETSVSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KAPAGPSLEETSVSSPK 17 1 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KAPAGPSLEETSVS(0.321)S(0.679)PK 217.17 9.6328e-56 95288000.0 6920.5 6397.4 6878.1 7205.1 8400.9 6743.3 6632.0 7369.6 8048.3 7803.7 7132.7 True False 7623.0640653971695 6936.531349677249 7344.889227375281 7650.1426630306505 7810.849765531655 6688.384800533988 6884.384389169651 7222.607546660643 7710.057939717172 7310.973050212227 6255.423117910635 1.2186328441269916 1.1088828395662722 1.1741634560810552 1.22296166363657 1.2486525081201136 1.0692138124731627 1.1005465592660173 1.154615349037022 1.232539796970984 1.1687415722973755 1.0 12.610891756497805 -10.918072699344146 1.1115492145063983 0.9976971203275534 1.1721708458469127 0.0028544885883190485 0.07404398456451829 0.32428775434357354 0.696133016275113 0.04468864729740688 0.010012662105781734 1.2076116683088605e-11 10.918072699344146 0.17447372551935925 KAPAGQEEPGT(ph)PPS(ph)SPLSAEQLDR ddPTM_A549_MK2206_60min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(0.999)PPS(0.566)S(0.427)PLS(0.008)AEQLDR 66.47399999999999 0.00010819 17301000.0 1007.6 1557.6 1428.0 1017.3 1550.9 1373.9 1284.9 1489.6 1960.1 2182.8 1885.9 True False 1177.658246545155 1636.8751869524913 1630.5118726750723 1266.538545668332 1322.7646644648075 1519.28518607899 1518.349697985005 1700.7553617086755 1516.1404796365114 1689.7039639795605 1417.5789818078708 0.8307531796522974 1.1546976979476282 1.150208837461489 0.8934518371971674 0.9331153194567371 1.0717464110122534 1.0710864914550433 1.1997605661024004 1.0695280468273751 1.19196459997216 1.0 10.46921340324275 -7.3682034728637715 18.400561190824394 1.0531283973580747 1.0044481815401842 0.11497121781518183 0.11116710348122881 11.060949689857335 1886.7040035985326 0.015891299063994585 0.02540399925106049 4.2834778662160266e-08 7.3682034728637715 -0.048680215817890504 KAPAGQEEPGT(ph)PPS(ph)SPLSAEQLDR ddPTM_A549_PD325901_60min_R1 2 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(1)PPS(0.621)S(0.365)PLS(0.014)AEQLDR;KAPAGQEEPGT(1)PPS(0.534)S(0.458)PLS(0.008)AEQLDR 107.15 2.8114e-11 80985000.0 5895.6 6873.3 7315.2 6933.1 6555.3 7428.4 7076.5 7257.1 7714.299999999999 8471.0 7807.799999999999 True False 6494.116971888669 7452.537112848445 7811.653461871104 7361.341840787463 6094.878342557305 7367.9055732781735 7345.800079909388 7112.351447415184 7390.09479820088 7936.139614330092 6847.490097722134 0.9483937733694544 1.0883604074619375 1.1408053681552173 1.0750423492012446 0.8900893985352106 1.0760009095492025 1.072772647360676 1.0386800631929585 1.079241399802717 1.1589851903502721 1.0 12.741359559287154 -11.043269147878132 1.3554941035064816 1.0001204084423263 1.051069249337035 0.0 0.08145922927138025 1.0114479210916885 3.3255912890040595 0.04657616854293042 0.010517739791929109 9.051714597944732e-12 11.043269147878132 0.05094884089470875 KAPAGQEEPGT(ph)PPSS(ph)PLSAEQLDR ddPTM_A549_MK2206_60min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(1)PPS(0.245)S(0.722)PLS(0.033)AEQLDR 86.54299999999999 4.3476999999999997e-07 18427000.0 1341.1 1835.4 1414.1 1325.2 2136.3 1389.7 1579.1 1436.1 2473.7 1896.5 2344.9 True False 1567.4448932529842 1928.8140203727569 1614.6406436623395 1649.8740594904891 1822.053099939498 1536.7571315917992 1866.0020297985225 1639.6715728717966 1913.410899687179 1468.0793328235472 1762.596614052324 0.8892816885931301 1.094302578931142 0.9160579515412638 0.936047446328245 1.03373232730232 0.8718711469998203 1.0586665235379427 0.9302591187339713 1.0855636987115975 0.8329071559080882 1.0 10.78348662347509 -8.75878084716324 24.998993790365486 1.0404050793939272 0.9700444786710701 0.0 0.093366923521864 85.32142020489927 802305.0295132381 0.011285333407959305 0.012508612907110812 1.7426860423918865e-09 8.75878084716324 -0.0703606007228571 KAPAGQEEPGT(ph)PPSSPLSAEQLDR ddPTM_A549_MK2206_60min_R1 2 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGT(0.922)PPS(0.035)S(0.042)PLS(0.002)AEQLDR;KAPAGQEEPGT(0.753)PPS(0.212)S(0.034)PLSAEQLDR 111.04 1.6719e-11 165659000.0 5733.799999999999 6342.4 5035.700000000001 6071.700000000001 7052.2 5658.1 5131.7 5477.5 8485.3 8634.5 8501.400000000001 True False 6701.525262049036 6665.201069419291 5749.837981253405 7559.266772568974 6014.830721992847 6256.836386457191 6064.063464199274 6253.952399140224 6563.393098239729 6683.960453079307 6390.267753296274 1.0487080543052687 1.0430237553005817 0.8997804478986787 1.1829342782498744 0.94124862278114 0.9791195968634874 0.9489529544472162 0.9786682875555981 1.0270920330144464 1.0459593730844123 1.0 12.641660666266262 -5.5612822344671695 24.998493683919094 1.0040886715702977 1.0472884852368118 0.05772415987605006 0.06969118172486265 308.6282380917407 200898.78978458437 0.008486115826405209 0.03286677883510033 2.746108962348246e-06 5.5612822344671695 0.04319981366651415 KAPAGQEEPGT(ph)PPSSPLSAEQLDR ddPTM_A549_PD325901_60min_R1 2 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGT(0.993)PPS(0.006)S(0.001)PLSAEQLDR;KAPAGQEEPGT(0.905)PPS(0.09)S(0.004)PLSAEQLDR 180.79 3.273e-43 292610000.0 12441.5 12423.2 11783.3 13438.7 15638.4 14231.5 14152.0 13623.3 14923.4 14975.6 15516.6 True False 13704.551921051785 13470.146663224199 12582.98559673909 14268.77797749787 14540.0127335512 14115.603382438792 14690.56210427154 13351.5725942279 14296.221395521436 14030.038060248111 13608.156567831564 1.0070836452196685 0.9898582953598868 0.9246649635472387 1.0485459883102723 1.0684777663362912 1.0372899012498715 1.0795409378959295 0.9811448396904688 1.0505626771899725 1.0310021045329414 1.0 13.732184024600388 -6.2855607066934915 24.791524505404787 1.0307424995439811 0.975467886181325 0.41648808325523046 0.03268386687129434 570.6121942466162 586465.3163259208 0.004849160819281953 0.01127370525815896 5.181306614352947e-07 6.2855607066934915 -0.055274613362656155 KAPAGQEEPGTPPS(ph)SPLSAEQLDR ddPTM_A549_MK2206_60min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGTPPS(0.556)S(0.422)PLS(0.021)AEQLDR 98.839 1.6294e-08 7658400.0 1240.5 1791.9 1130.9 1251.5 2031.8 1603.7 1521.0 1946.6 2623.5 2075.6 2547.4 True False 1449.8660726868459 1883.100056176278 1291.2786252158548 1558.1175561819698 1732.924911509186 1773.402469550096 1797.346011857104 2222.53651121248 2029.2814388686238 1606.7205184331933 1914.8102753366409 0.7571852372851646 0.9834394981221898 0.6743637434203953 0.8137190280682188 0.9050112869299921 0.9261504872791201 0.9386548813777984 1.1607084732307165 1.0597819872842795 0.8391016797477324 1.0 10.902985737704892 -7.464052153820992 1.3417312974261177 1.0371965069645552 0.8154783973568976 0.39321338426931784 0.1031416994748563 0.21969714921677894 0.786066309282603 0.013517727685445948 0.02485374380986277 3.4351669298036866e-08 7.464052153820992 -0.2217181096076576 KAPAGQEEPGTPPS(ph)SPLSAEQLDR ddPTM_A549_PD325901_60min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGTPPS(0.486)S(0.486)PLS(0.029)AEQLDR 118.57 3.0817e-16 17737000.0 1845.2 1955.9 1746.1 1956.6 2149.7 1941.6 1797.4 1878.3 2155.5 1785.6 2026.2 True False 2032.523345635554 2120.7305572316473 1864.6008461522756 2077.454738238992 1998.7124880623983 1925.7882533354286 1865.801040575019 1840.8358330021547 2064.911830953164 1672.8569112675978 1776.990245140064 1.1438010710494073 1.193439616808076 1.0493028035757765 1.1690861803663108 1.1247740349327906 1.0837359735667182 1.049978212135855 1.0359290592825163 1.1620276681881312 0.941399040227 1.0 10.795220046317546 -10.97011673235635 1.1414127818608606 0.9976540258453327 1.1150505740474963 0.4868482944239706 0.05400871931971023 0.427652179002628 0.957128705371352 0.0410658502094511 0.008721954130301822 1.0712313343559254e-11 10.97011673235635 0.11739654820216361 KAPAGQEEPGTPPSS(ph)PLSAEQLDR ddPTM_A549_MK2206_60min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGTPPS(0.097)S(0.863)PLS(0.04)AEQLDR 110.17 1.5083e-11 8540000.0 1236.0 1843.4 1606.9 1458.6 2554.3 2101.6 1743.4 1648.8 2649.7 2642.7 3400.3 True False 1444.6065827012824 1937.2211862019922 1834.7825827742133 1815.957065479042 2178.5658536607484 2323.9899170708236 2060.153213064875 1882.5224492382285 2049.5471807014264 2045.7122345651387 2555.911666494144 0.5652020770666145 0.7579374559760165 0.717858370000291 0.7104928895958004 0.8523635156175066 0.9092606554195046 0.8060345903466674 0.7365365845449658 0.8018849820082866 0.8003845599919233 1.0 11.319622261591368 -14.999999999999998 0.0370251632394778 2.1754314324877924 0.04586968255106891 0.35537150151571384 0.08680217514755732 320.3570950751864 0.9136528303082706 44.71423217852705 15.183767146828341 1.000000000000004e-15 14.999999999999998 -2.1295617499367236 KAPAGQEEPGTPPSS(ph)PLSAEQLDR ddPTM_A549_PD325901_60min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGT(0.002)PPS(0.189)S(0.776)PLS(0.034)AEQLDR 117.04 3.6347e-16 13570000.0 1925.7 2254.2 2008.5 1848.7 2463.1 2253.4 2092.9 1956.9 2985.5 2328.9 2978.7 True False 2121.195646374586 2444.1693451155884 2144.8088880916607 1962.890000297671 2290.100353233705 2235.0490575123895 2172.5464547788233 1917.8680943416477 2860.0298173559145 2181.852856547439 2612.338783535043 0.8119910249558684 0.9356249505311535 0.8210301441795707 0.7513918227870385 0.8766475342584464 0.8555739675111735 0.8316480498133981 0.7341574938248895 1.0948158161498844 0.8352105287029172 1.0 11.351126290900122 -8.769143846276659 24.999922804332083 1.0447741454247412 0.830870378365723 0.3072321221477027 0.08433121440755578 63.91544000687703 207396.10585491353 0.01046783471170935 0.011245908234227407 1.7015948157183619e-09 8.769143846276659 -0.21390376705901826 KAPAPPVLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KAPAPPVLSPK 11 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KAPAPPVLS(1)PK;KAPAPPVLS(1)PK 94.461 0.00012027 164514000.0 17592.2 17507.9 19283.4 22094.8 24503.0 27936.0 20871.7 21934.7 33783.0 21174.3 20475.1 True False 19378.147193306853 18983.352176980403 20592.087484504205 23459.54561506843 22781.993810760996 27708.498478151298 21665.983964932482 21497.195201060746 32363.217993547092 19837.35108437136 17956.792502352833 1.079154152433837 1.057168320817488 1.1467575560505072 1.3064440997463542 1.2687117595069346 1.5430650253669036 1.2065620272714987 1.1971623104874671 1.8022827845956688 1.1047268648770163 1.0 14.132242054004427 -6.251852380974644 1.4997138647394948 1.3673332270689593 1.0569631819474354 0.12919012205552738 0.21048105344831833 0.6535009107092755 2.7186896565712324 0.042853442464377195 0.17017157924581858 5.599478984478499e-07 6.251852380974644 -0.3103700451215239 KAPAPVT(ph)PPAPVQNK ddPTM_A549_MK2206_60min_R1 2 KAPAPVTPPAPVQNK 15 1 Q03468;P0DP91 Q03468 ERCC6 DNA excision repair protein ERCC-6 1 KAPAPVT(1)PPAPVQNK;KAPAPVT(1)PPAPVQNK 76.71300000000001 0.00037131 6920700.0 3995.3 4932.200000000001 3853.3 4324.7 5947.5 4883.1 5031.3 4561.1 5831.6 6030.2 6171.1 True False 4669.60896429323 5183.227912870494 4399.755881637855 5384.251694143158 5072.63062860561 5399.826400860556 5945.422083797927 5207.649892782926 4510.751911151617 4667.97363184421 4638.6455563044465 1.0066750967740359 1.1174011572895235 0.9485001232004214 1.160737898334428 1.0935585758888882 1.1640954962643304 1.2817151066257741 1.1226660518834293 0.972428666169803 1.0063225515258227 1.0 12.179487897243908 -8.759550228570092 24.98610444789242 0.986980198528393 1.1150685719460434 0.2960285126073391 0.08148386641473963 42.208235511106636 558250.1498617134 0.014201158714046817 0.0157085384140322 1.7396014918241689e-09 8.759550228570092 0.12808837341765034 KAPAPVT(ph)PPAPVQNK ddPTM_A549_PD325901_60min_R1 2 KAPAPVTPPAPVQNK 15 1 Q03468;P0DP91 Q03468 ERCC6 DNA excision repair protein ERCC-6 1 KAPAPVT(1)PPAPVQNK;KAPAPVT(1)PPAPVQNK 71.558 0.00089775 5864300.0 4412.4 4504.0 4542.2 4492.7 4748.8 5169.8 4548.7 4492.0 4842.1 4427.6 5010.9 True False 4860.3435997628 4883.567886789375 4850.461006467482 4770.203875337997 4415.26067047063 5127.698862841725 4721.803267644147 4402.403536094172 4638.603375856332 4148.040580381056 4394.591066712242 1.1059831338070338 1.1112678774097984 1.103734325409325 1.0854716179329889 1.004703419145175 1.1668204811324911 1.0744579406740353 1.0017777466124453 1.0555256007760114 0.9438968307657261 1.0 12.101513208056993 KAPDFVFYAPR ddPTM_A549_MK2206_60min_R1 1 KAPDFVFYAPR 11 1 E7EQR4;P15311;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 E7EQR4;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 93.959 4.6797e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KAPKS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 KAPKSPAK 8 2 P10412 P10412 HIST1H1E Histone H1.4 1 KAPKS(1)PAK 68.132 0.001578 6361700000.0 33560.0 31521.0 25741.0 22991.0 24554.0 17984.0 14087.0 17697.0 20195.0 29052.0 36724.0 True False 36966.986494433775 34177.38529295913 27487.93905320757 24411.101853650543 22829.411746701466 17837.544266576202 14623.088493702187 17344.019451972064 19346.274380004255 27217.651761954676 32207.18081261657 1.1477870947323845 1.0611728325992063 0.8534723735409862 0.7579397276550186 0.7088298687030211 0.5538374926497346 0.4540319309156628 0.5385140522817156 0.6006820184778703 0.8450802297881552 1.0 14.975094762540891 -5.8000621227058655 1.8466151776309245 0.7334720016860196 1.154100066876244 0.523267672880273 0.15090939827585662 0.3567434649997342 2.1972184252245595 0.02957272406630146 0.18007625667302982 1.5846665010887445e-06 5.8000621227058655 0.42062806519022444 KAPLHNLT(ph)YELPTLNQEQENFLAVEAR ddPTM_A549_PD325901_60min_R1 1 KAPLHNLTYELPTLNQEQENFLAVEAR 27 1 Q6P0N0;G5E9K5;Q6P0N0-2 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 KAPLHNLT(1)YELPTLNQEQENFLAVEAR 99.37200000000001 2.7745e-10 8628500.0 1902.5 1724.0 2263.5 1699.5 1940.4 1921.5 1779.1 1990.1 2211.8 1994.0 2000.7 True False 2095.640399453523 1869.2875303785272 2417.114721531227 1804.4742551554561 1804.112998016597 1905.8519410712943 1846.8046240608742 1950.405894296752 2118.8457377416876 1868.098499701831 1754.6265834822452 1.1943512193315224 1.0653477771143334 1.3775664544727249 1.0284092764480308 1.0282033881169979 1.0861866331062453 1.0525342779178073 1.1115789038291906 1.2075764482814402 1.064670122570689 1.0 10.776948316058215 -11.046545940167828 1.3537114169224485 1.0001443165415993 1.1335143372514134 0.10971870432787723 0.09920208767036144 0.5775575584609479 1.8904823566780502 0.06972390149942317 0.015638758860380398 8.983675571949195e-12 11.046545940167828 0.13337002070981407 KAPLNIPGT(ph)PVLEDFPQNDDEKER ddPTM_A549_MK2206_60min_R1 2 KAPLNIPGTPVLEDFPQNDDEKER 24 2 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER 94.006 6.0053e-08 38334000.0 2722.3 3446.8 2666.8 3049.9 3695.6000000000004 3041.8 2791.1 2717.8999999999996 4643.9 3955.6000000000004 4497.9 True False 3181.757686155098 3622.2273975268695 3044.992340371068 3797.125636915214 3151.9821355317176 3363.6812570165735 3298.206741416409 3103.170648219665 3592.064064784446 3062.027212716489 3380.9472942752136 0.9410846751567546 1.0713646449503083 0.9006328923041773 1.1230951879506357 0.9322778089054535 0.9948931362260879 0.9755274052929175 0.9178405867119273 1.0624430824067284 0.9056713832544104 1.0 11.723211810837046 -8.798923647518043 24.999985570660964 1.029486997640116 0.9855978296747009 0.0 0.07408210264704548 291.34898149841797 194312.87171401532 0.01039458184025385 0.011066008752241006 1.5888260525136143e-09 8.798923647518043 -0.04388916796541509 KAPLNIPGT(ph)PVLEDFPQNDDEKER ddPTM_A549_PD325901_60min_R1 2 KAPLNIPGTPVLEDFPQNDDEKER 24 2 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER 153.81 7.0116e-30 72325000.0 9014.5 8244.1 9094.2 9495.2 9828.1 9467.1 9408.5 10734.7 9866.0 9207.1 11737.099999999999 True False 9929.645403875847 8938.859239671468 9711.387099867148 10081.69693883619 9137.80816110436 9390.003076406996 9766.545616028741 10520.587987290757 9451.366329939185 8625.762134706489 10293.511107607068 0.9646509631235237 0.8683974929667594 0.9434474785469731 0.979422554019071 0.8877250984216042 0.9122254766371831 0.9488060501349349 1.022060196691863 0.9181868296576156 0.8379805534315607 1.0 13.3294475477408 -7.990426976927254 14.698931146736614 0.9658190717597764 0.925315991410396 0.0 0.054414721327089195 2.111380152200823 3235.0322442330103 0.0067130951356902694 0.00923401195439067 1.022287435439117e-08 7.990426976927254 -0.04050308034938044 KAPPPPIS(ph)PTQLSDVSSPR ddPTM_A549_MK2206_60min_R1 2 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPIS(0.96)PT(0.04)QLSDVSSPR;KAPPPPIS(0.962)PT(0.038)QLSDVSSPR 166.65 5.5823999999999995e-28 47086000.0 5357.4 5569.1 5466.799999999999 5464.299999999999 6992.9 5908.3 5302.9 5761.799999999999 8640.0 9624.3 9761.5 True False 6261.598144145512 5852.543402450648 6242.074443655521 6803.053745301745 5964.253673438614 6533.512384387871 6266.36828815058 6578.552794772458 6683.053795244869 7450.163945633353 7337.450146305492 0.8533752215404576 0.7976263260061105 0.8507143924921237 0.9271686498241051 0.8128509978962785 0.8904336321354885 0.8540253307623199 0.8965720602660381 0.910814201389822 1.0153614398844828 1.0 12.841063080646661 -10.296814149834805 0.21670976563822622 1.0771814933950667 0.8195521611359978 0.7650970793908726 0.032117582861127945 1.8591701597262569 0.15416340340460616 0.13943442274406534 0.03780935153786125 5.0487730642534506e-11 10.296814149834805 -0.2576293322590689 KAPPPPIS(ph)PTQLSDVSSPR ddPTM_A549_PD325901_60min_R1 2 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPIS(0.967)PT(0.033)QLSDVSSPR;KAPPPPIS(0.969)PT(0.031)QLSDVSSPR 176.9 7.232099999999999e-35 98599000.0 12543.6 11911.9 12374.8 12987.2 16248.400000000001 14472.0 13131.400000000001 13287.5 13460.099999999999 12606.4 13669.6 True False 13817.01703788973 12915.757617816678 13214.62834371753 13789.389847928769 15107.16843793695 14354.144830176301 13631.122612777792 13022.4703886579 12894.418805758613 11810.42975257832 11988.325858733886 1.1525393287356784 1.0773612404276722 1.1022913874242284 1.1502348209765043 1.2601566403811828 1.1973435656755058 1.1370330414273044 1.0862626310053631 1.0755812744583189 0.9851608883298778 1.0 13.54934258342767 -9.02303842179677 0.8452195371821434 1.0182236116298493 1.1537206950831833 0.6085825936107356 0.04804658467839974 0.2972647144090223 0.44578103309578293 0.014157089078930164 0.012691821334876528 9.483345609463786e-10 9.02303842179677 0.135497083453334 KAPPPPISPTQLS(ph)DVSSPR ddPTM_A549_PD325901_60min_R1 1 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 KAPPPPISPT(0.001)QLS(0.843)DVS(0.062)S(0.093)PR 118.51 1.9987e-14 8261100.0 2295.9 2671.5 2681.3 3005.3 3119.1 3388.6 3033.9 3162.6 3120.0 2833.5 3128.6 True False 2528.9780778477493 2896.6366806300634 2863.2691419667244 3190.9305554684875 2900.0251763108467 3361.0043650867474 3149.3567247137826 3099.519461988296 2988.877250092263 2654.5923264318635 2743.8020338294355 0.92170573775621 1.0557017761909453 1.0435407171014275 1.1629594686957094 1.0569367398067622 1.2249441919087372 1.147807562602586 1.129643984432214 1.0893195694300086 0.9674868280226964 1.0 11.421960679031585 -3.8244201843823613 11.528938211680364 1.068514812146042 0.6361737379867409 0.0 0.08592949877880064 0.0 0.0 0.011218277936530205 0.0 0.00014982345766678743 3.8244201843823613 -0.432341074159301 KAPPPRDPGT(ph)PATK ddPTM_A549_MK2206_60min_R1 2 KAPPPRDPGTPATK 14 2 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 KAPPPRDPGT(0.995)PAT(0.005)K;KAPPPRDPGT(0.991)PAT(0.009)K 80.609 0.00017398 9071300.0 2960.2 3543.1 3164.2 2673.7 3295.0 2583.6000000000004 2533.5 2010.49 4027.2 4875.2 4948.6 True False 3459.8093900585245 3723.42865619631 3612.931139718814 3328.756620026954 2810.3098648601076 2856.994837145119 2993.8041558448194 2295.483114367397 3115.045630116911 3773.888934026552 3719.7260455880123 0.9301247854427945 1.0009953987371434 0.9712895776300869 0.8948929515858327 0.7555152800011796 0.7680659280093535 0.8048453351546647 0.6171107996219458 0.8374395296695798 1.0145609885713982 1.0 11.860980656741225 -6.339925654100658 4.417540796320575 0.8661405890427794 0.9710057768623195 0.19071224752822613 0.10922334120320856 0.38397793372995614 13.88634629983511 0.018055458308645207 0.04392056540500257 4.571664442158957e-07 6.339925654100658 0.10486518781954013 KAPPPRDPGT(ph)PATK ddPTM_A549_PD325901_60min_R1 2 KAPPPRDPGTPATK 14 2 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 KAPPPRDPGT(0.793)PAT(0.207)K;KAPPPRDPGT(1)PATK 80.638 0.0001733 22138000.0 4876.2 4704.0 4786.200000000001 4965.1 4789.5 5218.6 4763.7 4698.3 5804.8 4555.9 5496.700000000001 True False 5371.228234331285 5100.422588689433 5111.02031375868 5271.7829504397505 4453.1020428780075 5176.101451821319 4944.98521029666 4604.588720754955 5560.844442735763 4268.239696485243 4820.640746452173 1.1142145861593868 1.0580383100406663 1.0602367159428374 1.0935855268450783 0.9237572922552545 1.0737372320537997 1.0257941776590591 0.9551818861722429 1.1535488195896686 0.8854092061571944 1.0 12.235009202962098 -12.965986934426699 14.39792157242696 1.0599310370227502 1.0568800950226707 0.0 0.08309047524453035 0.0 0.0 0.0 0.009545134024955064 1.0814664862890398e-13 12.965986934426699 -0.003050942000079493 KAPS(ph)PPSK ddPTM_A549_PD325901_60min_R1 2 KAPSPPSK 8 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 KAPS(0.931)PPS(0.069)K;KAPS(0.946)PPS(0.054)K 44.543 0.024446000000000002 24040000.0 9594.8 10134.6 10946.5 9924.7 10937.6 11216.3 9432.3 9784.4 9940.2 10193.5 13902.400000000001 True False 10568.857032681566 10988.678309381788 11689.395316651904 10537.726178370918 10169.380708671571 11124.958171552415 9791.251338052612 9589.242466286692 9522.44796197664 9549.880670366405 12192.492934574682 0.8668331480193919 0.9012659157029983 0.9587370999005358 0.8642798675313329 0.834069026181996 0.9124432740087942 0.8030557319649713 0.7864874326967325 0.7810091023283269 0.7832590694627733 1.0 13.573705515896409 -10.983310062993805 1.287689335085545 0.999096596938752 0.8505684155403934 0.0 0.08190630337785015 0.3236804140928162 0.9642254060307405 0.04131523198660678 0.009739658372965183 1.0391779835125905e-11 10.983310062993805 -0.14852818139835855 KAPT(ph)PQEK ddPTM_A549_MK2206_60min_R1 4 KAPTPQEK 8 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK 64.64 0.005758699999999999 318327600.0 17567.300000000003 15078.7 11374.939999999999 7364.44 4952.41 4455.879999999999 4463.75 4033.4400000000005 5493.89 20088.899999999998 20201.199999999997 True False 20532.230760751005 15846.14142366497 12988.077535690887 9168.728130602278 4223.917049417854 4927.398264026236 5274.755595284119 4605.192471891946 4249.532686939564 15550.80353765301 15184.684515243212 1.3521670957430583 1.043560793624507 0.8553406244728199 0.6038141998536888 0.27816956257323994 0.32449790175619686 0.34737340706611536 0.30327877192766195 0.27985650163977077 1.0241110720504116 1.0 13.890329314197578 -5.76035306268106 1.5598907860717786 0.5513992734967917 1.345187183081571 0.51636844217678 0.2603310051217188 0.3966666656334299 1.5816458212511681 0.04621888241821149 0.3605624144938682 1.7363886457330962e-06 5.76035306268106 0.7937879095847792 KAPT(ph)PQEK ddPTM_A549_PD325901_60min_R1 5 KAPTPQEK 8 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK 81.33800000000001 0.0025463 193249600.0 30190.899999999998 31787.5 24596.690000000002 25211.0 26306.600000000002 22573.8 18282.53 21566.02 23866.600000000002 29158.600000000002 33648.2 True False 33255.85794263409 34466.34418324094 26265.969295312552 26768.226211664736 24458.915168843218 22389.96645711953 18978.281683734294 21135.868812884597 22863.569800337198 27317.521019762204 29509.684713513914 1.1269472468272295 1.1679672120474105 0.8900796314941343 0.9070997020651417 0.8288436628956017 0.758732825324497 0.6431204490315419 0.716234992616016 0.7747819071027506 0.9257137541443196 1.0 14.848900886402737 -5.812472359003067 4.512296124325564 0.8490877304651155 1.1502987105753468 0.6042969147056807 0.09896036515852955 0.12957477937675152 5.462409165725472 0.017673146997502723 0.06192492263146679 1.5400245389533472e-06 5.812472359003067 0.3012109801102313 KAPT(ph)TDEDKK ddPTM_A549_MK2206_60min_R1 1 KAPTTDEDKK 10 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.512)T(0.488)DEDKK 61.423 0.0026002 7241800.0 7745.3 5822.7 4296.9 2782.0 3074.2 2736.3 1945.9 2041.4 3234.3 9430.4 9671.1 True False 9052.517285595664 6119.050559237463 4906.265032001063 3463.5901248887258 2621.989252368115 3025.8534497910628 2299.444841862419 2330.7747015253044 2501.7362141157955 7300.066090302751 7269.498961218573 1.2452738949257938 0.841743095622059 0.6749110300689327 0.47645513719258176 0.3606836270774562 0.4162396151280066 0.3163140753069132 0.3206238440860305 0.34414149138229383 1.0042048467504086 1.0 12.827640216747094 -5.356676149523161 1.7230007178479416 0.5772839526462027 1.3944917476684917 0.43159137980083906 0.2405191565992648 0.7191069110925935 2.406595032860544 0.04219305466269758 0.9023990092589605 4.398695009026814e-06 5.356676149523161 0.817207795022289 KAPT(ph)TDEDKK ddPTM_A549_PD325901_60min_R1 1 KAPTTDEDKK 10 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.659)T(0.341)DEDKK 109.44 7.3684e-05 26135000.0 8837.5 8219.3 7551.3 7154.9 6349.8 4708.4 3627.2 4542.2 5505.1 8891.5 11085.0 True False 9734.67649417635 8911.969256635854 8063.776627655736 7596.84192304312 5903.811953620791 4670.056351465046 3765.2350808799974 4451.6022577130325 5273.739791500938 8330.089172567117 9721.615273604575 1.001343523705082 0.916716924689767 0.8294688074676148 0.7814382393499478 0.6072871418446679 0.48037864285216514 0.38730550170022576 0.4579076760833871 0.5424756733399864 0.8568626651153715 1.0 13.246980326230943 -5.9846560644576465 1.596750714835034 0.691900373610767 0.9820643330415406 0.3161723982370661 0.17830981592248812 0.629351859522355 2.894314906954072 0.03524712106811558 0.18371303673122552 1.0359622627404915e-06 5.9846560644576465 0.29016395943077367 KAPT(ph)TDEDKKAAEK ddPTM_A549_MK2206_60min_R1 1 KAPTTDEDKKAAEK 14 3 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.541)T(0.459)DEDKKAAEK 42.277 0.020016 20678000.0 1875.2 1765.2 2011.2 1536.5 2466.1 1209.7 1434.0 1295.4 2146.8 3145.1 2801.2 True False 2191.6879157616854 1855.0411402211982 2296.4184021877513 1912.9425689761056 2103.339956822916 1337.7096510661297 1694.539238003343 1479.0269169961189 1660.5532277351483 2434.6197256331857 2105.584730812984 1.0408927665976453 0.8810099698552388 1.0906321501016416 0.9085089481236417 0.9989338951991729 0.6353150417032273 0.8047832097210673 0.7024304913272496 0.7886423203183064 1.1562677530878362 1.0 11.040005216813181 KAPTT(ph)DEDKK ddPTM_A549_MK2206_60min_R1 1 KAPTTDEDKK 10 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.261)T(0.739)DEDKK 45.115 0.017083 10566000.0 6488.0 5122.3 3777.3 2442.7 2302.1 2400.3 2241.0 1873.1 2459.5 8054.4 7559.5 True False 7583.015783629386 5383.003190887748 4312.977938834419 3041.1616096569705 1963.46413957343 2654.2981528098107 2648.1606920261465 2138.617661128168 1902.4271770144385 6234.905445976255 5682.267518413809 1.334505240919415 0.9473336433815774 0.7590240911498612 0.5352021177816534 0.3455423619550961 0.467119533567957 0.4660394258884478 0.3763669440408814 0.33480070602967604 1.0972565838851447 1.0 12.472251039175056 -2.958093447547669 7.96252590274435 0.6561241305883124 1.121711415204735 0.0 0.33478510005856815 0.0 0.0 0.046513213263728884 0.0 0.0011013023158014817 2.958093447547669 0.4655872846164225 KAPTT(ph)DEDKK ddPTM_A549_PD325901_60min_R1 1 KAPTTDEDKK 10 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.15)T(0.85)DEDKK 78.763 0.00045184 24671000.0 7835.3 7378.0 5214.1 5489.3 5519.0 4045.3 3029.9 4152.3 5458.9 7223.8 7828.7 True False 8630.733887957 7999.769953093256 5567.960180930409 5828.361593895174 5131.364479516386 4012.3564180149383 3145.2045025248995 4069.479119083668 5229.481416836108 6767.688035178581 6865.819530218145 1.2570580758744148 1.1651587866363686 0.8109680361425842 0.8488952510684463 0.747378292850839 0.584395846752974 0.45809600568178177 0.5927157131312437 0.7616689302449454 0.9857072422880236 1.0 12.745216220856014 -3.784651878157143 8.927810448941063 0.8428183564842324 1.0625130796736624 0.0 0.2363955507208979 0.0 0.0 0.033204622329491965 0.0 0.00016419053646276824 3.784651878157143 0.21969472318942995 KAPTT(ph)DEDKKAAEK ddPTM_A549_MK2206_60min_R1 1 KAPTTDEDKKAAEK 14 3 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.142)T(0.858)DEDKKAAEK 55.864 0.0036241999999999997 17657000.0 2315.2 2786.9 2743.5 2595.6 2635.3 1998.8 2046.9 2099.7 2948.9 3740.3 3526.8 True False 2705.949158794504 2928.7413061876623 3132.569553700326 3231.5221165209123 2247.6508609608013 2210.311689303942 2418.7952344972427 2397.338905061564 2280.978858425647 2895.3636322488337 2650.9982252717537 1.0207283931761657 1.104769244380553 1.1816566015917294 1.2189831308505117 0.8478507603415671 0.833765812527982 0.9124092243589835 0.9043155450682405 0.8604226274771739 1.092178638464396 1.0 11.372319989045872 -6.764262666154493 24.999914307036292 0.9160215713642264 1.13320271827691 0.5960457172991596 0.08306807025602822 35.00265871526339 309949.1273014353 0.011157070548791703 0.021768179504284082 1.7208274844988512e-07 6.764262666154493 0.21718114691268364 KAPTT(ph)DEDKKAAEK ddPTM_A549_PD325901_60min_R1 2 KAPTTDEDKKAAEK 14 3 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.151)T(0.849)DEDKKAAEK;KAPT(0.169)T(0.831)DEDKKAAEK 63.145 0.0013746 61350000.0 4693.7 4211.4 4414.9 4472.5 5267.7 5121.5 4652.0 4754.799999999999 4374.9 4781.4 5500.8 True False 5170.200968680684 4566.309457909585 4714.521662950393 4748.756167215521 4897.714924578452 5079.792202027913 4829.034405672076 4659.961783931558 4191.038167124566 4479.501588001169 4824.236472444209 1.0717138345544641 0.9465351634382168 0.9772575805268873 0.9843539375277668 1.0152311049746314 1.0529733007582496 1.0009945476875508 0.965948043913067 0.8687464205089367 0.9285410476015951 1.0 12.236084911066973 -8.40991679191907 4.180587332821821 0.9372345128035454 1.0045116516736983 0.3652347748480945 0.043034315952351763 0.25988664722966265 7.743476749411014 0.009284698756193277 0.011232803439860457 3.891196907289467e-09 8.40991679191907 0.06727713887015285 KAPWIPPNPT(ph)SPPASPK ddPTM_A549_PD325901_60min_R1 1 KAPWIPPNPTSPPASPK 17 1 Q2KHM9;Q2KHM9-2 Q2KHM9 KIAA0753 Uncharacterized protein KIAA0753 1 KAPWIPPNPT(0.541)S(0.45)PPAS(0.008)PK 63.857 0.0017420000000000003 2706300.0 2412.0 2227.2 2417.2 3073.3 3113.7 3326.5 3238.2 3609.9 3021.1 2753.0 2903.2 True False 2656.864464379447 2414.893960359079 2581.245727804412 3263.1307610292833 2895.004453681856 3299.4100868975584 3361.4314730110295 3537.897712588236 2894.1336731582505 2579.1751101700793 2546.12480490111 1.043493413702726 0.9484585970454311 1.0137938732758491 1.2816067597110665 1.1370237814380415 1.2958556000658048 1.3202147304564615 1.3895225032873617 1.1366817791442305 1.012980630488085 1.0 11.314087423068246 -6.034745938211143 22.18767861946355 1.1408786521140912 0.9922634437505221 0.2452632272898474 0.1274177079002108 214.40971414853672 136916.19365141977 0.021286387057324517 0.05637592663116487 9.23111288307184e-07 6.034745938211143 -0.14861520836356912 KAQAVS(ph)EEEEEEEGK ddPTM_A549_PD325901_60min_R1 2 KAQAVSEEEEEEEGK 15 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 KAQAVS(1)EEEEEEEGK;KAQAVS(1)EEEEEEEGK 166.29 8.0911e-21 70182100.0 16451.7 18067.9 18181.8 18034.4 21596.6 17827.0 17172.0 18327.4 17821.32 18487.7 19201.0 True False 18121.864472898567 19590.54534230057 19415.72628404528 19148.343928905895 20079.729320225328 17681.822822523023 17825.489856878947 17961.84562943284 17072.35189570969 17320.383466869374 16839.398725167488 1.0761586425181773 1.1633755849620289 1.1529940350558547 1.1371156560529416 1.1924255520011515 1.0500269701492657 1.0585585713483752 1.0666559966056144 1.0138338176050217 1.028563059141953 1.0 14.039553005382157 -7.890364713052086 0.9170924415510301 1.005835652716532 1.145132357201616 0.6779995669453263 0.03540914803031996 0.18333660854103104 0.3098675393907135 0.00639051144826395 0.010384929879947713 1.2871681559622502e-08 7.890364713052086 0.13929670448508413 KAQAVS(ph)EEEEEEEGKS(ph)SSPK ddPTM_A549_PD325901_60min_R1 1 KAQAVSEEEEEEEGKSSSPK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 KAQAVS(1)EEEEEEEGKS(0.484)S(0.333)S(0.183)PK 96.338 1.2789e-06 15285000.0 3514.4 3058.9 3367.7 3117.9 3669.6 2974.7 3918.8 2905.1 3140.8 3259.6 3402.6 True False 3871.179300835463 3316.6842382104837 3596.252373625234 3310.485601735332 3411.8599554327484 2950.4750294586406 4067.932078449644 2847.155501493139 3008.803098426213 3053.7882997131837 2984.101770858542 1.2972678541461755 1.1114514493439198 1.2051373075625949 1.1093742291446338 1.1433457091683366 0.9887313691080225 1.3632015228754342 0.9541080432635505 1.008277642474829 1.0233525979358917 1.0 11.543081023274414 -6.760174235937717 0.2626039864565827 0.9757269184002523 1.2998483083510424 0.31110741573677436 0.10567271432270957 3.3541862638078883 0.33938552342763945 0.06873190664488456 0.34081506019488533 1.7371037749308194e-07 6.760174235937717 0.3241213899507901 KAQAVS(ph)EEEEEEEGKSSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KAQAVSEEEEEEEGKSSSPK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 KAQAVS(1)EEEEEEEGKS(0.336)S(0.229)S(0.435)PK;KAQAVS(1)EEEEEEEGKSS(0.01)S(0.99)PK 197.73 2.962e-55 117318000.0 11112.7 12509.8 13526.0 14971.4 16724.7 15482.7 13915.3 12769.9 15160.3 14833.0 16405.1 True False 12240.853123262641 13564.044749146917 14443.955698445508 15896.149375483617 15550.014769082745 15356.614024472816 14444.854356244334 12515.19432670725 14523.165312363373 13896.44184858438 14387.376700497103 0.8508050757327917 0.94277400470638 1.0039325444190565 1.1048678092187845 1.080809593909185 1.0673672028023167 1.003995005965559 0.8698732637114334 1.0094380382673638 0.965877389455177 1.0 13.812515944095063 -5.44476181255828 2.40872636500398 1.0114350473075469 0.8427251837046463 0.39769477817724397 0.0596137962432017 0.3057159207253377 2.754164430903828 0.008477229884164982 0.08951667168087366 3.5911883824104895e-06 5.44476181255828 -0.16870986360290052 KAQAVS(ph)EEEEEEEGKSSSPK ddPTM_A549_MK2206_60min_R1 2 KAQAVSEEEEEEEGKSSSPK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 KAQAVS(1)EEEEEEEGKSSSPK;KAQAVS(1)EEEEEEEGKSSSPK 255.68 2.9506999999999995e-98 85897000.0 6866.4 7727.900000000001 7133.5 8139.0 9313.2 6664.4 6343.5 6551.7 11984.099999999999 11719.1 11354.2 True False 8025.280452637608 8121.217101470315 8145.137565635594 10133.055365373593 7943.240617121439 7369.622384529309 7496.031838406005 7480.42353873975 9269.720484675225 9071.747170731573 8534.638780021702 0.94031870117615 0.9515595575621614 0.9543623081860393 1.1872857922345281 0.9307061285025165 0.863495523885613 0.8783068658925649 0.8764780480516985 1.0861292110422105 1.062932761954397 1.0 13.05911437859473 -8.772806234068904 24.9961626997783 1.0406721254012892 0.9504418270228795 0.2203615474902656 0.08477432113523561 285.58397782497286 628008.6321564149 0.01588844650313657 0.016985968356165136 1.6873056700663825e-09 8.772806234068904 -0.09023029837840968 KAQAVS(ph)EEEEEEEGKSSSPK ddPTM_A549_PD325901_60min_R1 4 KAQAVSEEEEEEEGKSSSPK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 KAQAVS(1)EEEEEEEGKSSSPK;KAQAVS(1)EEEEEEEGKSSSPK;KAQAVS(1)EEEEEEEGKSSSPK;KAQAVS(0.997)EEEEEEEGKS(0.001)S(0.001)SPK 168.35 6.069999999999999e-35 181902400.0 13630.49 14308.73 15419.6 15356.32 18839.899999999998 18823.2 19600.6 19335.589999999997 17561.2 18700.300000000003 20008.299999999996 True False 15014.247310563604 15514.57689359231 16466.066781587342 16304.845009666882 17516.6504181266 18669.910100012075 20346.51155885988 18949.92648897308 16823.163834718038 17519.559866586835 17547.40594306383 0.855639138872174 0.8841521615179216 0.9383761243693162 0.9291883405770236 0.9982472893693219 1.0639698061690965 1.1595167755780156 1.0799275146685507 0.95872654278953 0.9984130944159297 1.0 14.098970150267977 -6.262260208317105 1.3587361266993803 1.0083631668429478 0.8696741715708045 0.5382910119617415 0.057612818603937715 0.3924373356665684 1.317631159798037 0.010399130807423477 0.044211013293389445 5.466883154646032e-07 6.262260208317105 -0.1386889952721433 KAQAVSEEEEEEEGKS(ph)SSPK ddPTM_A549_MK2206_60min_R1 1 KAQAVSEEEEEEEGKSSSPK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 KAQAVSEEEEEEEGKS(0.371)S(0.332)S(0.298)PK 58.284 0.00092482 12571000.0 896.61 975.53 858.4 671.1 1065.2 773.77 782.12 940.82 1338.5 1268.9 942.69 True False 1047.9358479901266 1025.1803101744763 980.1340276640641 835.5195301268237 908.5104910619077 855.6498278130433 924.2210800747386 1074.184116140411 1035.3318871452832 982.2546087106771 708.5940560795705 1.4788944939617872 1.4467808491740373 1.3832094966853652 1.179122973101824 1.2821311204449166 1.2075317602113211 1.3043026146566414 1.5159372378644216 1.4611072140139745 1.3862021566271456 1.0 9.468815553480326 -10.839671830244248 1.0769484563762544 0.999216584680381 1.362006713245494 0.0 0.15326390783857774 0.3031453070718238 0.6220718524089374 0.08278929944513956 0.02014782094855252 1.4465324138715676e-11 10.839671830244248 0.36279012856511306 KAQAVSEEEEEEEGKSS(ph)SPK ddPTM_A549_MK2206_60min_R1 3 KAQAVSEEEEEEEGKSSSPK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 KAQAVSEEEEEEEGKS(0.02)S(0.756)S(0.224)PK;KAQAVSEEEEEEEGKS(0.005)S(0.801)S(0.193)PK;KAQAVSEEEEEEEGKS(0.063)S(0.468)S(0.468)PK 285.13 1.0388999999999998e-127 190194000.0 21767.699999999997 22158.4 20267.300000000003 18527.3 28863.5 21834.5 20930.600000000002 20553.4 29370.699999999997 29002.100000000002 29353.2 True False 25441.555590830667 23286.167913821326 23141.50789710611 23066.4893317221 24617.71738524724 24145.012297431917 24733.41908992525 23466.90739214763 22718.283345370186 22450.505467166775 22063.990332892947 1.1530804359038562 1.05539240919202 1.0488360241260077 1.0454359788825065 1.115741849675632 1.0943175705364858 1.1209857653469293 1.0635840135029073 1.0296543373435865 1.0175179162264956 1.0 14.429406109412346 -8.800075786315713 2.0324126373766247 1.011567383209468 1.087215591123585 0.5186798263346077 0.03152635996712556 0.1812328880013031 1.4652408070072118 0.006080770374089253 0.0064785530813995205 1.5846166456908365e-09 8.800075786315713 0.07564820791411697 KAQAVSEEEEEEEGKSS(ph)SPK ddPTM_A549_PD325901_60min_R1 3 KAQAVSEEEEEEEGKSSSPK 20 2 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 KAQAVSEEEEEEEGKS(0.007)S(0.497)S(0.497)PK;KAQAVSEEEEEEEGKS(0.027)S(0.947)S(0.027)PK;KAQAVSEEEEEEEGKS(0.145)S(0.547)S(0.308)PK 305.57 2.483799999999999e-163 295130000.0 36787.0 36816.0 36610.0 36530.0 41856.0 37073.0 40693.0 41028.0 39105.0 40466.0 39825.0 True False 40521.58915884192 39918.613525763234 39094.574753814115 38786.37513435061 38916.178955361094 36771.089779513975 42241.59438306401 40209.66435415665 37461.55284130061 37910.96985402925 34926.77747147517 1.160186885032152 1.142922892281285 1.1193295684304914 1.1105054042282483 1.11422185992235 1.0528051094763913 1.2094329176965404 1.1512560638322855 1.0725739834399437 1.0854413890600494 1.0 15.092045917776309 -9.437736968735079 1.0087463193996744 1.0148192829499063 1.1301366731713536 0.34102768381244286 0.044236259204889355 0.22600380702924056 0.48343694334649473 0.011162007035192465 0.008351161214164994 3.649749277474758e-10 9.437736968735079 0.11531739022144727 KAQLDYVDLYLIHSPMS(ph)LKPGEELSPTDENGK ddPTM_A549_MK2206_60min_R1 1 KAQLDYVDLYLIHSPMSLKPGEELSPTDENGK 32 2 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5 S4R3Z2 AKR1C3 Aldo-keto reductase family 1 member C3 1 KAQLDYVDLYLIHS(0.007)PMS(0.537)LKPGEELS(0.45)PT(0.005)DENGK 111.81 1.5032e-15 2488400.0 1717.7 2345.7 2242.9 1701.7 2916.8 2573.7 2445.7 2453.5 2981.5 2740.1 2577.2 True False 2007.6057662669853 2465.0861107052265 2560.976946234538 2118.6165763922154 2487.7425838615964 2846.0472257162055 2890.0520323464266 2801.2911385286225 2306.1950104771495 2121.1095069179005 1937.2101128984798 1.036338677410257 1.2724928980558188 1.3219923482656044 1.0936431532572959 1.2841883114782022 1.4691474129555886 1.4918629698986507 1.4460440402808412 1.190472316411042 1.094930019616854 1.0 10.919764724094813 -9.5811656207236 1.2209163334667763 1.0419794355946335 1.3012027831523316 0.3112084857596056 0.13972551743913236 0.32096040366081946 0.9832846609979912 0.03928925345055356 0.028901039538450506 2.623217973196933e-10 9.5811656207236 0.25922334755769816 KAQLDYVDLYLIHSPMSLKPGEELS(ph)PTDENGK ddPTM_A549_MK2206_60min_R1 1 KAQLDYVDLYLIHSPMSLKPGEELSPTDENGK 32 2 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5 S4R3Z2 AKR1C3 Aldo-keto reductase family 1 member C3 1 KAQLDYVDLYLIHS(0.006)PMS(0.159)LKPGEELS(0.696)PT(0.14)DENGK 88.573 1.3676e-09 3858300.0 1007.2 926.76 728.47 937.33 1535.3 883.77 988.05 1278.0 1760.1 1236.8 1091.6 True False 1177.190736324217 973.9281254879895 831.7779999212963 1166.9758920783424 1309.459403799611 977.2899548009527 1167.5658954736425 1459.1604137108548 1361.4401603021402 957.4060210050945 820.5255933726451 1.4346788763596687 1.1869564256793097 1.0137136570017273 1.4222297287299308 1.5958788054584356 1.191053591374221 1.4229487841744721 1.7783240711763773 1.6592293662725965 1.1668204242963627 1.0 9.680404523947523 -4.915294134073461 18.311430111416538 1.3446246398038688 4.642064851390009 0.01107915232217771 0.2469234539708502 19043059.49381539 26306870.860943586 0.040821812672021354 2558745994.562659 1.2153625947597529e-05 4.915294134073461 3.2974402115861396 KAQLMQY(ph)LS(ph)LPK ddPTM_A549_MK2206_60min_R1 1 KAQLMQYLSLPK 12 1 Q6IC83 Q6IC83 C22orf42 Uncharacterized protein C22orf42 2 KAQLMQY(1)LS(1)LPK 47.201 0.012551 3246400.0 1597.7 1327.4 1395.6 1348.0 1360.6 1047.9 770.7 551.53 1547.4 2303.9 2152.0 True False 1867.3526999853057 1394.9589902161906 1593.5170654799247 1678.2600605140199 1160.4575423759213 1158.7880824602762 910.7262138976134 629.711066489787 1196.9163706900356 1783.447389871959 1617.599007821484 1.1543977777905414 0.8623639007388265 0.9851125388769916 1.0375006737759018 0.717395063155224 0.7163630027326021 0.5630111105991231 0.3892874955072184 0.739933917431115 1.1025274998615588 1.0 10.659638302117369 -6.75567196687687 24.98331447351633 0.79126234712507 0.9975429629472741 0.28148368147429337 0.19364182059823354 194.8074174832229 843858.8540558754 0.03032934181918699 0.06180966881546813 1.7552057506256735e-07 6.75567196687687 0.20628061582220403 KAQVS(ph)PQS ddPTM_A549_MK2206_60min_R1 3 KAQVSPQS 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAQVS(0.5)PQS(0.5);KAQVS(0.644)PQS(0.356);KAQVS(0.558)PQS(0.442) 80.986 0.0030594000000000003 850839000.0 13150.7 12494.0 10619.4 8932.599999999999 9259.5 7351.9 7459.8 8766.0 10456.7 15701.099999999999 19137.1 True False 15370.216656253842 13129.891233811279 12125.390602721054 11121.087400999644 7897.439815985483 8129.873178203746 8815.149098784757 10008.607344749093 8088.274145918634 12154.210605112457 14384.82991290918 1.0685018001123783 0.9127595747258924 0.8429290214853032 0.7731121930763603 0.5490116924426192 0.5651699204943581 0.6128087125224817 0.6957751607314596 0.5622780522875759 0.8449325211836584 1.0 13.81226054221489 -5.622495152637523 1.4940572452778342 0.7354848186039881 1.0852693444795527 0.41776690465464217 0.13362030703508088 0.7155131668470602 2.289244121787967 0.02710331456209704 0.3019419845835925 2.385090416418744e-06 5.622495152637523 0.34978452587556463 KAQVSPQS(ph) ddPTM_A549_MK2206_60min_R1 1 KAQVSPQS 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAQVS(0.178)PQS(0.822) 77.66199999999999 0.0035567 34392000.0 4890.3 5936.8 5287.7 4160.1 4106.4 3505.8 3658.3 3675.5 5073.3 8003.3 8362.6 True False 5715.66308364408 6238.957761876959 6037.575370549008 5179.324686753985 3502.3539997151884 3876.781429038303 4322.965756197791 4196.513380746671 3924.205650395343 6195.348971466748 6285.9356239813915 0.9092780177128013 0.9925265123738767 0.9604895327777669 0.8239544590616567 0.5571730620901371 0.6167389647211856 0.6877203354907582 0.6676036204915314 0.6242834615461471 0.985588994553325 1.0 12.617911781832417 -6.360030788766674 4.33523757716876 0.7632490517918328 0.9577943918216874 0.3136221269338847 0.137565895533483 0.2872930340487104 9.268668752523467 0.024445856407538262 0.05922236389657182 4.3648488709054665e-07 6.360030788766674 0.19454534002985457 KAQVSPQS(ph) ddPTM_A549_PD325901_60min_R1 4 KAQVSPQS 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAQVSPQS(1);KAQVS(0.099)PQS(0.901);KAQVS(0.308)PQS(0.692);KAQVS(0.161)PQS(0.839) 111.27 0.0012297 1746323000.0 20355.899999999998 21011.81 20049.77 18816.49 20860.8 18564.399999999998 16088.99 17826.7 19450.0 22696.6 22263.1 True False 22422.415982778446 22782.54896965362 21410.4679612614 19978.74185195065 19395.60937385313 18413.217681407205 16701.26531868314 17471.13248372438 18632.584139196955 21263.532802574013 19524.879837418695 1.1484022523819446 1.1668470771324146 1.0965736096479861 1.02324531665809 0.993379192873811 0.9430643279104319 0.8553837697211225 0.8948138287766368 0.9542995549446769 1.0890480750525928 1.0 14.253026049120617 -6.2886186136507085 1.464395306103258 0.9593652322906612 1.1621683199464845 0.6598886279182252 0.05630484334058745 0.1739362662838575 0.6916565677522046 0.007409259634466257 0.028840896011061785 5.144952698915472e-07 6.2886186136507085 0.20280308765582333 KAS(ph)AQASLASK ddPTM_A549_MK2206_60min_R1 2 KASAQASLASK 11 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 KAS(0.982)AQAS(0.017)LASK;KAS(0.995)AQAS(0.005)LASK 56.225 0.012499 1654250.0 1611.41 1768.52 1235.37 1272.9299999999998 2139.81 1471.62 1265.96 1097.85 2344.26 1776.54 1901.4 True False 1883.376612807989 1858.5301140403317 1410.5640421194717 1584.7979071439986 1825.046783589167 1627.3458516177038 1495.9685451483363 1253.4735995246167 1813.2888530139733 1375.2183801393849 1429.2299040296334 1.317756231868585 1.3003716958344564 0.9869399164840209 1.108847430826734 1.2769441630374163 1.1386172700623558 1.0466955252829073 0.8770272690142561 1.2687174036182054 0.9622093522267019 1.0 10.481022289776773 -7.517143745940213 23.501551348888388 1.1015309024847932 1.1892149410115596 0.18790954486235711 0.1331534900377676 262.9537816658938 1077562.2961576544 0.022515367318339193 0.034039907845053924 3.0398786980263584e-08 7.517143745940213 0.08768403852676632 KAS(ph)AVNMEK ddPTM_A549_MK2206_60min_R1 3 KASAVNMEK 9 1 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 KAS(1)AVNMEK;KAS(1)AVNMEK;KAS(1)AVNMEK 82.069 0.00064521 64179000.0 9456.7 10794.0 11375.6 10159.9 14490.3 10203.2 9520.9 11089.0 14156.9 13689.7 13634.8 True False 11052.759765882856 11343.368495098359 12988.831133615246 12649.075956095243 12358.796065184339 11282.895851663992 11250.72428947422 12660.899708638224 10950.384753923849 10597.187262090427 10248.902858663743 1.0784334594936262 1.1067885657155416 1.2673386910517304 1.2341882961065 1.2058652751047427 1.100888164056134 1.0977491390664906 1.2353419564256616 1.068444584257828 1.0339826036239836 1.0 13.323181857564737 -9.174784387109357 0.8492095038718033 1.0119965994117568 1.1707886648865307 0.42620258863107596 0.06522748271605264 0.31825718793702623 0.48786741681673307 0.018896487443095116 0.015554623421993322 6.686758106671261e-10 9.174784387109357 0.15879206547477387 KAS(ph)AVNMEK ddPTM_A549_PD325901_60min_R1 3 KASAVNMEK 9 1 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 KAS(1)AVNMEK;KAS(1)AVNMEK;KAS(1)AVNMEK 91.62 0.00043004 94075000.0 13584.5 16054.199999999999 14302.3 17565.4 17993.6 16536.6 15665.3 16594.0 16053.7 16928.800000000003 17114.2 True False 14963.588439619654 17407.143776219797 15272.940084716629 18650.374864082187 16729.791610550114 16401.931412292248 16261.451563881083 16263.01965225883 15379.01881724557 15859.912678912924 15009.261895852374 0.9969569818589586 1.1597601465685696 1.0175676985779774 1.2425910743309763 1.114631200830281 1.0927873419828007 1.083427797896893 1.0835322726131467 1.0246352501514664 1.0566750576386181 1.0 13.873565411446354 -8.671953751185946 1.138642781974614 1.0071743756844618 1.1090483251162748 0.18845838052445962 0.06369019206752866 0.3490657229145449 0.8885252421542275 0.01195815644405856 0.013156239916614345 2.128365687471328e-09 8.671953751185946 0.10187394943181305 KAS(ph)DVHEVR ddPTM_A549_MK2206_60min_R1 4 KASDVHEVR 9 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 1 KAS(1)DVHEVR;KAS(1)DVHEVR;KAS(1)DVHEVR;KAS(1)DVHEVR 82.54299999999999 0.00062935 40973400.0 4317.969999999999 4094.62 4084.15 3865.25 4628.76 3879.16 3694.03 3866.4700000000003 5488.23 6085.96 6206.2 True False 5046.73777176914 4303.0186684639275 4663.343882903293 4812.236423517668 3947.8755356812944 4289.650136421994 4365.187434701181 4414.553963067766 4245.154667902398 4711.13740911721 4665.029257593726 1.0818233912582798 0.922399074230774 0.999638721517622 1.031555464670306 0.8462702627759409 0.9195333832985741 0.9357256286432796 0.946307883467561 0.9099952933825963 1.0098837861409828 1.0 12.187670413896251 -5.253388171549305 23.95974354223562 0.9509880916582053 1.0818235088507928 0.34167703525600257 0.051730656374029724 495.9210446787874 1475756.966382367 0.007161323127663165 0.10625691766268593 5.5797125818836255e-06 5.253388171549305 0.1308354171925875 KAS(ph)DVHEVRK ddPTM_A549_PD325901_60min_R1 2 KASDVHEVRK 10 2 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 1 KAS(1)DVHEVRK;KAS(1)DVHEVRK 58.751999999999995 0.0021704 22825000.0 5322.6 4679.6 5571.700000000001 5462.700000000001 5797.799999999999 6023.6 5385.700000000001 5538.200000000001 6638.700000000001 5564.700000000001 6861.5 True False 5862.946433708979 5073.966315057632 5949.829067353898 5800.118572308157 5390.5825293241705 5974.545798718217 5590.6557606681245 5427.736256366149 6359.698525701128 5213.343892322356 6017.578998632186 0.9743031932013929 0.8431906446447914 0.988741330808671 0.963862472536969 0.895805859889744 0.9928487519775394 0.9290539869836187 0.9019800583589995 1.0568533503501503 0.8663523808341136 1.0 12.554967461151936 -8.763013717553006 24.999552388657744 1.0268474173374917 0.9360953965232542 0.0 0.0654155740565486 26.524059910020448 421183.76759788464 0.007521130442386949 0.008218052388865794 1.7257833808235453e-09 8.763013717553006 -0.0907520208142375 KAS(ph)EEIEDFR ddPTM_A549_MK2206_60min_R1 6 KASEEIEDFR 10 1 Q96FT9-3;Q96FT9 Q96FT9-3 IFT43 Intraflagellar transport protein 43 homolog 1 KAS(1)EEIEDFR;KAS(1)EEIEDFR;KAS(1)EEIEDFR;KAS(1)EEIEDFR;KAS(1)EEIEDFR;KAS(1)EEIEDFR 102.73 0.0001635 36328900.0 8506.86 9427.93 8174.050000000001 6828.83 10120.98 6617.9400000000005 6342.369999999999 6376.1 9020.95 9569.79 9740.79 True False 9942.60999524128 9907.771367055093 9333.253202268688 8501.893656557824 8632.197249181136 7318.246018166967 7494.696532032965 7279.931700987302 6977.719228497008 7407.9677924921925 7321.883010872416 1.357930737281283 1.3531725858420351 1.2747066824762903 1.1611621824513156 1.1789586416995474 0.9995032708525868 1.0236023330206088 0.9942704206250196 0.952995181449314 1.0117571916256989 1.0 12.83799900709141 -6.6038328199808864 0.7542373154241528 0.9766378172531891 1.3881964130234308 0.9531311981543851 0.03155543305900722 0.11106620049764923 0.1054113383679176 0.005350077492993015 0.02637138304772005 2.489815578926401e-07 6.6038328199808864 0.4115585957702417 KAS(ph)EEIEDFR ddPTM_A549_PD325901_60min_R1 2 KASEEIEDFR 10 1 Q96FT9-3;Q96FT9 Q96FT9-3 IFT43 Intraflagellar transport protein 43 homolog 1 KAS(1)EEIEDFR;KAS(1)EEIEDFR 119.96 2.2883e-05 35712000.0 2855.7 3062.1000000000004 2809.0 2662.2 3672.8 3739.7 4236.200000000001 4659.4 4509.7 6664.200000000001 6638.4 True False 3145.608561744771 3320.1539134408863 2999.635631889206 2826.638047705125 3414.8351984721457 3709.2451230935817 4397.410909137587 4566.464611771409 4320.1729919041945 6243.42127468051 5821.918884284764 0.5403044295645861 0.5702851550204611 0.5152314368354031 0.48551656316186953 0.5865480550905453 0.6371172798552776 0.7553198518460325 0.7843573059902584 0.742053106161567 1.0723992207334796 1.0 12.507279023460562 -9.302933914392904 0.19661425505644384 1.1560750333470524 0.4125732166806853 0.9181085308351024 0.05318198670837784 0.7029158782756074 0.09266389218944956 0.18347891064940114 0.11204733693523634 4.978128302660141e-10 9.302933914392904 -0.7435018166663672 down KAS(ph)EIKEAEAK ddPTM_A549_MK2206_60min_R1 2 KASEIKEAEAK 11 2 Q6ZNB6 Q6ZNB6 NFXL1 NF-X1-type zinc finger protein NFXL1 1 KAS(1)EIKEAEAK;KAS(1)EIKEAEAK 79.00399999999999 0.00032901 14073400.0 3966.8 5314.1 5811.0 4264.8 7001.7 4707.5 4757.6 4489.2 7253.6 6216.4 7210.4 True False 4636.29886105133 5584.564991643705 6635.08717935214 5309.6761914541485 5971.759205095902 5205.644525414401 5621.9943366281095 5125.557847598406 5610.671181619003 4812.110922522695 5419.858683083656 0.8554279976933798 1.0303894101656428 1.2242177457617907 0.979670596952388 1.101829319597359 0.9604760621641566 1.0372953734338786 0.9456995370739434 1.0352061759711386 0.887866493187756 1.0 12.404039520028629 -7.26951310317531 24.7388155281688 1.009314981581781 1.0449379428404881 0.0371861768503462 0.09462140354919799 1579.4969070946697 4839749.040255844 0.012445977915260307 0.020107035657695352 5.37634211821044e-08 7.26951310317531 0.03562296125870712 KAS(ph)EIKEAEAK ddPTM_A549_PD325901_60min_R1 2 KASEIKEAEAK 11 2 Q6ZNB6 Q6ZNB6 NFXL1 NF-X1-type zinc finger protein NFXL1 1 KAS(1)EIKEAEAK;KAS(1)EIKEAEAK 96.993 9.203299999999999e-05 15935400.0 7451.799999999999 7068.5 8381.0 9045.1 9101.8 9241.3 9593.0 9385.2 9727.2 9022.8 9818.4 True False 8208.301250274777 7664.187301902908 8949.785059047152 9603.795284087459 8462.520967505385 9166.04191674325 9958.066864491022 9198.004823453035 9318.399611249182 8453.098868159313 8610.799043965644 0.9532566267502278 0.8900669104888574 1.039367544562437 1.1153198715998018 0.9827799864213332 1.064482154320709 1.1564625784025848 1.0681941102665609 1.0821759471647892 0.9816857674878796 1.0 13.071931404198114 -5.811019042610246 7.148883106783953 1.0526545296002394 0.9219012731399188 0.4841623531877811 0.05289505910370784 0.11881603537868834 13.779380962716896 0.007338420346987099 0.023421467866284004 1.5451866858962626e-06 5.811019042610246 -0.13075325646032065 KAS(ph)ELR ddPTM_A549_MK2206_60min_R1 1 KASELR 6 1 P35269;M0QXD6;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 KAS(1)ELR 46.158 0.047120999999999996 6191200.0 2082.8 1840.0 2091.9 1445.3 2899.8 2355.9 2150.0 2021.4 3131.2 3090.0 3426.8 True False 2434.32572042899 1933.6481407245678 2388.562875664557 1799.398564881983 2473.2432613418323 2605.1997742801477 2540.6271699492263 2307.939640277873 2421.9881994989273 2391.966853901796 2575.830985131351 0.9450642276146293 0.7506890599135968 0.9272979824577874 0.6985701217466429 0.9601729599567312 1.0114016755440571 0.9863330259689652 0.8959980890051226 0.9402745030553398 0.9286194892868024 1.0 11.330822217822528 -6.953624863723722 24.892150415265323 0.9692009222642404 0.8313493688732267 0.42683009723052645 0.07207247641933351 74.77099410154723 40133.43947963421 0.009350844493630826 0.01767143004989223 1.1126924373307193e-07 6.953624863723722 -0.13785155339101363 KAS(ph)ETSPFPPAK ddPTM_A549_PD325901_60min_R1 1 KASETSPFPPAK 12 1 E7ENF1;G5EA44;F5H7W8;Q96C57 E7ENF1 C12orf43 Uncharacterized protein C12orf43 1 KAS(0.333)ET(0.333)S(0.333)PFPPAK 43.184 0.03127 3517700.0 2159.3 2374.1 2271.8 2226.7 2560.6 2577.6 2503.7 2783.2 2518.3 2421.4 3018.1 True False 2378.5105464073554 2574.1737389046743 2425.9780094431817 2364.2382017973864 2380.752289590442 2556.608880200557 2598.9796735772106 2727.6868926218367 2412.4646086241487 2268.512390761292 2646.892833312222 0.8986047778258468 0.9725266193280104 0.9165380550777358 0.8932126650699597 0.8994517116929356 0.9658905899115352 0.98189833788055 1.030524114271945 0.9114326724007489 0.8570473130650178 1.0 11.370084069227607 -7.276537208859433 23.249262243366893 0.9656906220740529 0.9179599369371519 0.14998109698202844 0.04738592826938894 367.3962498118414 565755.4606418767 0.006312808043606336 0.010121004460123368 5.290086716220688e-08 7.276537208859433 -0.04773068513690093 KAS(ph)FLR ddPTM_A549_MK2206_60min_R1 1 KASFLR 6 1 P46777;A0A2R8Y4A2 P46777 RPL5 60S ribosomal protein L5 1 KAS(1)FLR 50.607 0.040202 12335000.0 2284.9 3358.2 2057.4 1863.3 3472.4 2764.5 1962.4 2555.8 3002.4 3109.5 3242.6 True False 2670.535259558383 3529.118035968067 2349.170256891943 2319.8085836467153 2961.6145598604653 3057.037555073419 2318.942678282958 2918.0924768092323 2322.36119384759 2407.061790358459 2437.372928792725 1.0956613278219791 1.4479187793868307 0.963812401927156 0.9517659592599802 1.215084702416633 1.2542346388443828 0.951410697513397 1.197228557984607 0.952813238554306 0.9875640128450595 1.0 11.251111291307199 -8.770181208454032 24.99669282449591 0.9777173521190646 1.133852614055442 0.19013942755257884 0.14198947349460517 218.02784084544288 623434.7216682789 0.024056096237717383 0.025799370160436572 1.6975352116975604e-09 8.770181208454032 0.15613526193637728 KAS(ph)FLR ddPTM_A549_PD325901_60min_R1 1 KASFLR 6 1 P46777;A0A2R8Y4A2 P46777 RPL5 60S ribosomal protein L5 1 KAS(1)FLR 63.419 0.025072999999999998 20775000.0 4093.0 3279.4 3071.1 2858.2 3710.2 3022.0 3300.3 3808.9 3401.6 2870.5 3289.4 True False 4508.518346892656 3555.766547055303 3279.5233140245437 3034.7445225568254 3449.6083514951442 2997.389833940905 3425.894722493454 3732.9285014757525 3258.6425813826413 2689.2561401174057 2884.82465322462 1.5628396484524951 1.2325763172748516 1.1368189433485099 1.051968451241786 1.195777479105781 1.039019765236151 1.1875573507263373 1.2939880062738416 1.1295808144665473 0.9322078335372619 1.0 11.494267915625999 -5.130573926441627 1.5324765895528338 1.0951667369025282 1.8601685573485731 0.656314155109343 0.09564634994458328 0.6776830428523022 1.1421089656084005 0.013611505579560111 0.8532245064856043 7.403312361182818e-06 5.130573926441627 0.7650018204460449 KAS(ph)GGQDGAASSAGAAK ddPTM_A549_MK2206_60min_R1 1 KASGGQDGAASSAGAAK 17 1 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 1 KAS(0.996)GGQDGAAS(0.003)S(0.001)AGAAK 45.369 0.016534 1323400.0 600.25 748.04 544.54 442.17 572.25 551.25 473.73 644.15 552.24 802.49 740.09 True False 701.5575252964765 786.1120408628286 621.7639601866136 550.5016698497656 488.0727830549912 609.5829091098649 559.8006089395562 735.4602351266409 427.15852174606795 621.20695164649 556.305227555113 1.2611018026555816 1.413094829825141 1.1176669378412694 0.9895676736117449 0.8773471088884168 1.0957705930409825 1.006283207870983 1.3220444437649637 0.7678491960670089 1.1166656735846459 1.0 9.11973285231826 -5.3029405956439675 0.49471058492079195 0.9244134219763749 1.6687649622503358 0.18808971521661266 0.16372448299889877 2.9784343033460425 0.49222831152841284 0.03337849132909698 1.2731286342973736 4.978051718981176e-06 5.3029405956439675 0.7443515402739609 KAS(ph)GPPVSELITK ddPTM_A549_MK2206_60min_R1 2 KASGPPVSELITK 13 1 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 1 KAS(0.997)GPPVS(0.003)ELITK;KAS(1)GPPVSELITK 144.01 8.8945e-13 93954000.0 8015.5 8531.0 9833.099999999999 8958.7 12472.900000000001 9349.9 9243.4 9877.5 13203.1 13062.4 13687.0 True False 9368.320439839916 8965.191461152875 11227.58143921657 11153.58190217132 10638.152932750714 10339.30021203868 10922.8061314924 11277.665873575079 10212.618931018225 10111.594767769204 10288.140158017031 0.9105941692036197 0.8714103155142916 1.0913130329457534 1.0841203299004332 1.034020995958238 1.0049727213311515 1.061689087019368 1.0961812048008464 0.992659389759581 0.9828399120213915 1.0 13.328694581672694 -5.74716690943783 24.999856143453652 1.0210957587934049 0.8910021696631257 0.620740175077861 0.042746711938856694 137.70968124359348 241209.94611328855 0.006526149944102826 0.02503355456508175 1.7899178149163692e-06 5.74716690943783 -0.13009358913027913 KAS(ph)GPPVSELITK ddPTM_A549_PD325901_60min_R1 3 KASGPPVSELITK 13 1 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 1 KAS(0.762)GPPVS(0.238)ELITK;KAS(0.997)GPPVS(0.002)ELITK;KAS(0.987)GPPVS(0.013)ELITK 131.48 1.6067e-08 173578000.0 11014.2 12719.099999999999 11986.5 12298.9 14118.5 13626.900000000001 12373.7 14166.0 13978.3 14344.7 14489.1 True False 12132.353475774506 13790.983194685328 12799.975970679952 13058.575120171488 13126.865266180848 13515.927044384292 12844.587924648453 13883.448016987988 13390.840661847647 13438.973193918187 12707.032553972405 0.954774722126745 1.0853032079762843 1.0073143289995343 1.0276651975751165 1.0330393984925454 1.0636572297250482 1.010825137190118 1.0925798732330956 1.0538133592536894 1.057601224899433 1.0 13.633339539749949 -5.23274265687055 23.52838003935828 1.0338261666208284 0.9547744570815057 0.3752754114559014 0.030705684421034312 3998.8463117934534 3278531.3439712306 0.004320823997788733 0.5218499257805163 5.851367067995512e-06 5.23274265687055 -0.07905170953932272 KAS(ph)GS(ph)ENEGDYNPGR ddPTM_A549_MK2206_60min_R1 3 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(0.869)GS(0.719)ENEGDY(0.412)NPGR;KAS(0.965)GS(0.965)ENEGDY(0.07)NPGR;KAS(0.727)GS(0.905)ENEGDY(0.369)NPGR 89.171 5.7695e-05 120919000.0 6302.6 6773.799999999999 5032.3 4652.7 6935.3 5753.9 5880.0 5728.8 7568.0 7836.499999999999 7238.1 True False 7366.324796224191 7118.557486760909 5745.955810127989 5792.611708867642 5915.126557136355 6362.7738788703 6948.3198880471855 6540.874943714198 5853.860083612629 6066.229207314382 5440.680008602552 1.3539345788719237 1.3083948101166352 1.0561098614589994 1.0646852414971348 1.0872035384885033 1.1694813642430313 1.2771050451525954 1.202216438638565 1.075942726710039 1.1149762893099282 1.0 12.40957126402882 -2.000000035571389 0.044552176164289956 0.5968891755129108 2.1201239014740185 0.211278748378377 0.09833499724648523 380.00719188759234 1.2491771382075094 10.786643124678141 41.26843397071222 0.009999999180938534 2.000000035571389 1.5232347259611076 KAS(ph)GS(ph)ENEGDYNPGR ddPTM_A549_PD325901_60min_R1 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(0.876)GS(0.997)ENEGDY(0.127)NPGR 132.15 3.6504999999999997e-09 20986000.0 6093.9 6861.2 5551.5 5376.4 6626.2 6389.8 7205.8 6375.6 7637.7 9692.8 7624.6 True False 6712.548241907926 7439.41740338349 5928.258173881428 5708.488017309676 6160.7985711490255 6337.763587331437 7480.020662165055 6248.433656438558 7316.714029817209 9080.794953816407 6686.822536321649 1.0038472242154686 1.112548951759057 0.8865583229822787 0.8536921663917607 0.9213342417395776 0.9477989811911135 1.1186210822157898 0.9344398811989043 1.0941989248367368 1.3580134517539713 1.0 12.707105114353267 -7.719941486328971 24.949352082620713 1.0406637386304902 0.9523396117576344 0.19609952403041897 0.1228272164675792 173.7347606566497 104452.33218873976 0.012481986141955944 0.018513673694830642 1.905717463138786e-08 7.719941486328971 -0.08832412687285585 KAS(ph)GS(ph)ENEGDYNPGRK ddPTM_A549_PD325901_60min_R1 2 KASGSENEGDYNPGRK 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(1)GS(1)ENEGDYNPGRK;KAS(1)GS(0.999)ENEGDY(0.001)NPGRK 68.972 0.0015019999999999999 39878000.0 6574.299999999999 6369.4 6585.8 6936.4 7745.8 7988.599999999999 6874.8 7312.6 9439.4 10274.5 10886.5 True False 7241.718096256137 6906.171691411246 7032.751991632586 7364.845674292621 7201.761729559348 7923.543490211888 7136.424276034911 7166.744456376281 9042.694844397733 9625.766316542862 9547.529515209402 0.7584913023541784 0.723346461554225 0.736604372935352 0.7713875785940517 0.7543063069966739 0.829905105565741 0.7474629185137838 0.7506386280303733 0.9471240523522385 1.008194455037696 1.0 13.220911759460693 -8.812427219996211 4.222911267039485 0.9772093326793881 0.7587652716219606 0.9254463014455361 0.0286256547309163 0.04058275885217884 1.470709231971064 0.005512465938922433 0.005901313922238316 1.5401846118850164e-09 8.812427219996211 -0.21844406105742753 KAS(ph)GSENEGDY(ph)NPGR ddPTM_A549_PD325901_60min_R1 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(0.849)GS(0.284)ENEGDY(0.867)NPGR 60.034 0.0020071999999999998 54617000.0 6005.9 5552.2 6181.8 7181.6 7220.4 6975.8 6381.7 7553.8 7427.3 7535.2 7905.5 True False 6615.614546690101 6020.103379447597 6601.334122183235 7625.191121403019 6713.264013027745 6918.991397619117 6624.559085700232 7403.133533158533 7115.1564101315 7059.4261860347215 6933.173617093464 0.9541971558853749 0.8683041435173745 0.9521374318260123 1.0998125162484629 0.968281537977999 0.9979544404543137 0.9554872633461312 1.067784241679222 1.026248122878297 1.0182099246195115 1.0 12.75930017289448 -6.006983268398474 24.83851421825238 1.0134807535675256 0.9109931620528807 0.49151150577982317 0.042752311311171014 167.2143422436553 594767.3373906579 0.005394914345660338 0.015902181899247355 9.840490164405365e-07 6.006983268398474 -0.10248759151464493 KAS(ph)GSENEGDYNPGRK ddPTM_A549_MK2206_60min_R1 2 KASGSENEGDYNPGRK 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.949)GS(0.051)ENEGDYNPGRK;KAS(0.834)GS(0.166)ENEGDYNPGRK 148.2 3.1046999999999997e-15 50202900.0 7056.5 7323.900000000001 5902.6 5922.0 9030.1 5759.7 5550.1 4893.3 9651.1 11549.800000000001 11854.9 True False 8247.464685138833 7696.65522709384 6739.677436731014 7372.89026584868 7701.784252101136 6369.187631020572 6558.481328341951 5586.940260102757 7465.141259639785 8940.692158315524 8911.001151404704 0.9255373829503689 0.8637250850181477 0.7563322372221432 0.8273919103563846 0.8643006684930178 0.7147555614462637 0.7359982584345297 0.6269711074183901 0.8377443940137974 1.003331949621187 1.0 13.121371812371907 -10.010450548007716 0.9969026595567119 0.9803484027253051 0.7922538990004682 0.4877886593443057 0.08049675464758624 0.3196799470279738 0.6417587657666585 0.03125696651305163 0.016379778145752054 9.762239362028993e-11 10.010450548007716 -0.18809450372483694 KAS(ph)GSENEGDYNPGRK ddPTM_A549_PD325901_60min_R1 5 KASGSENEGDYNPGRK 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.886)GS(0.114)ENEGDYNPGRK;KAS(0.826)GS(0.174)ENEGDYNPGRK;KAS(0.5)GS(0.5)ENEGDYNPGRK;KAS(0.53)GS(0.47)ENEGDYNPGRK;KAS(0.555)GS(0.445)ENEGDYNPGRK 151.96 1.0907e-15 177551300.0 18126.100000000002 16785.399999999998 17657.4 17405.4 20007.9 23423.9 20798.4 22532.699999999997 26054.699999999997 27099.100000000002 28729.399999999998 True False 19966.24832827045 18199.964566366412 18855.7373465719 18480.492027468546 18602.61412750786 23233.143524569306 21589.894493321168 22083.267621938798 24959.711566659913 25388.058201238666 25195.865930671676 0.7924414419099183 0.7223393161578565 0.7483663152699288 0.733473184780353 0.7383200949986936 0.9221014109416621 0.8568824168507401 0.8764639279595539 0.9906272574770179 1.00762792876799 1.0 14.620899419203733 -7.906498384842257 0.7015553302397595 1.0011083847772388 0.7364352823047237 0.8512676094267106 0.04175157026974933 0.1539623411982168 0.15399460988193808 0.00905670101244137 0.015605523637727298 1.2402282375664313e-08 7.906498384842257 -0.2646731024725152 KAS(ph)KTAENATSGETLEENEAGD ddPTM_A549_MK2206_60min_R1 4 KASKTAENATSGETLEENEAGD 22 2 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 KAS(0.962)KT(0.038)AENATSGETLEENEAGD;KAS(0.966)KT(0.034)AENATSGETLEENEAGD;KAS(0.96)KT(0.04)AENATSGETLEENEAGD;KAS(0.829)KT(0.169)AENAT(0.002)SGETLEENEAGD 245.49 6.3991999999999976e-99 56135700.0 5196.259999999999 6787.37 6313.09 5558.84 6382.3 5191.830000000001 4943.57 4064.1299999999997 6808.52 8921.31 7841.88 True False 6073.261651640261 7132.818141798749 7208.381091222887 6920.756049545807 5443.472124581687 5741.226004542168 5841.752678393435 4640.232873376127 5266.401090972291 6905.979874881114 5894.524771122276 1.030322525980997 1.210075183116197 1.2228943589375165 1.1740990696062752 0.9234793873883896 0.9739930236053752 0.9910472693257011 0.7872106833970703 0.8934394706037693 1.1715923069343999 1.0 12.525159789473214 -6.759977200807904 24.971423633408932 0.9396413877723003 1.167510248913513 0.45958578141792783 0.10029094302516733 17.49297251475553 298738.0346326025 0.011050384805139686 0.02206850827198782 1.7378920606129334e-07 6.759977200807904 0.22786886114121263 KAS(ph)KTAENATSGETLEENEAGD ddPTM_A549_PD325901_60min_R1 2 KASKTAENATSGETLEENEAGD 22 2 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 KAS(0.953)KT(0.046)AENATSGETLEENEAGD;KAS(0.962)KT(0.038)AENATSGETLEENEAGD 248.02 2.0608999999999997e-100 111300000.0 5981.1 6386.4 7473.4 7194.8 8097.7 9348.2 7884.799999999999 9313.3 8211.3 8361.7 8671.4 True False 6588.296868946901 6924.60434107275 7980.589865204989 7639.206455423646 7528.9454875484425 9272.071358585832 8184.860378728112 9127.538925357494 7866.20761656494 7833.740834983349 7604.872772533586 0.8663257185237552 0.910548348169906 1.0494047834736138 1.0045146952377773 0.9900159690692829 1.2192276762437952 1.0762652609113015 1.200222436110082 1.0343641309786553 1.030094923254517 1.0 12.892708396915577 -5.686778125091981 3.5342067598581557 1.045804392776331 0.8741174816483497 0.4388090980190996 0.07535023353390723 0.18484621701160955 4.434017567858374 0.011158665793132565 0.050495764006012266 2.056941189754425e-06 5.686778125091981 -0.1716869111279813 KAS(ph)LLPLQR ddPTM_A549_MK2206_60min_R1 2 KASLLPLQR 9 1 A6NCL7 A6NCL7 ANKRD33B Ankyrin repeat domain-containing protein 33B 1 KAS(1)LLPLQR;KAS(1)LLPLQR 54.7 0.0080372 4663000.0 3059.3 3219.3 3134.4 2692.5 4509.1 4162.6 3519.4 3722.8 5256.4 4189.5 4975.3 True False 3575.6350472961426 3383.148619257934 3578.905051619571 3352.1626208709163 3845.817363168651 4603.08356908975 4158.829424148515 4250.518300596844 4065.83379274596 3243.0890402658847 3739.7956987055013 0.9561043798552468 0.9046346088982835 0.9569787603259662 0.8963491299889026 1.028349587251477 1.2308382435658367 1.1120472237529067 1.136564305389229 1.0871807233088466 0.8671834778002586 1.0 11.868743743942092 -6.899343594887122 5.447056122173409 1.070061114975052 0.9298466405521699 0.37714543311321724 0.08623323889695994 0.14866501310761598 6.78095940901467 0.010578511804866776 0.02025718949884373 1.2608296263816354e-07 6.899343594887122 -0.14021447442288215 KAS(ph)LLPLQR ddPTM_A549_PD325901_60min_R1 2 KASLLPLQR 9 1 A6NCL7 A6NCL7 ANKRD33B Ankyrin repeat domain-containing protein 33B 1 KAS(1)LLPLQR;KAS(1)LLPLQR 71.176 0.0013477 10964000.0 4506.3 4617.9 4737.5 3688.2 4872.0 4878.4 5243.0 5302.4 5596.1 4808.5 5297.5 True False 4963.7762586372755 5007.066639521457 5059.015238901785 3916.011737490059 4529.807527487558 4838.671927828366 5442.525234079688 5196.639472347666 5360.915377961963 4504.890489376258 4645.941083619327 1.0684113658131766 1.077729258594214 1.0889107605645012 0.842888807027094 0.9750032223737762 1.0414837038912461 1.1714580826840355 1.1185332269214503 1.153892243029834 0.9696400381097415 1.0 12.181755143735806 -7.528633021419777 24.91622687364206 1.0863371603067187 1.0092422933872547 0.14349588324786566 0.08383017221956127 224.6553089062834 972764.1188162471 0.01382110387381353 0.020535653696291904 2.960513041678897e-08 7.528633021419777 -0.07709486691946399 KAS(ph)LTSK ddPTM_A549_MK2206_60min_R1 2 KASLTSK 7 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 KAS(0.875)LT(0.102)S(0.023)K;KAS(1)LTSK 67.113 0.0099399 57918000.0 19244.5 13781.7 12147.400000000001 8721.5 20281.6 15726.8 15238.1 16689.5 18742.5 16005.0 15384.6 True False 22492.501117147913 14483.12966359988 13870.08397908486 10858.267891523008 17298.20350687306 17390.99953739506 18006.66552483874 19055.287734450158 14497.353675622326 12389.459384044741 11564.179226640532 1.9450149185972214 1.2524131094608884 1.1994006411740998 0.9389570741439818 1.4958436018548544 1.5038680391022663 1.557107095275433 1.6477855765632095 1.2536431156501455 1.0713652167810581 1.0 13.497375253160703 -9.54792041544158 1.213630679476821 1.0565510516285748 1.4137960968590848 0.2630738585215434 0.25109479984276156 0.40351227175896803 1.224722623499495 0.06727560131496298 0.05021789808762818 2.8319108965423186e-10 9.54792041544158 0.35724504523051004 KAS(ph)LTSK ddPTM_A549_PD325901_60min_R1 4 KASLTSK 7 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 KAS(0.996)LT(0.003)SK;KAS(0.494)LT(0.396)S(0.11)K;KAS(0.997)LT(0.003)SK;KAS(0.978)LT(0.018)S(0.004)K 77.66199999999999 0.007162600000000001 97488100.0 30887.3 29082.8 25690.5 25036.8 29663.1 25090.0 21510.199999999997 26102.5 31228.5 43758.8 50780.7 True False 34022.95595797151 31533.709622095466 27434.011819526404 26583.266273301648 27579.666188139618 24885.675358562974 22328.78243183307 25581.865160484886 29916.074745034042 40995.861900076474 44534.995825379556 0.7639600122872932 0.7080658488380293 0.616010203011905 0.5969073484936178 0.6192807628472381 0.5587892150285361 0.5013760980102836 0.5744216359824226 0.6717430683576151 0.920531396495917 1.0 15.442651838359865 -10.251079409663694 0.7431139397283323 0.9944148092733931 0.6159891473194407 0.76293340499297 0.07197223257201968 0.23269935543030013 0.24302763745056222 0.04703363068726783 0.01603927295533422 5.6094539918650846e-11 10.251079409663694 -0.37842566195395244 KAS(ph)PEAASTPR ddPTM_A549_MK2206_60min_R1 4 KASPEAASTPR 11 1 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;P29590-14;P29590-10;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;H3BT29 H3BT57;P29590-2 PML Protein PML 1 KAS(1)PEAASTPR;KAS(0.996)PEAAS(0.002)T(0.002)PR;KAS(0.983)PEAAS(0.016)T(0.001)PR;KAS(0.994)PEAAS(0.003)T(0.004)PR 124.09 2.3099e-06 59320200.0 9369.269999999999 9864.630000000001 9367.91 7971.11 11949.489999999998 8743.48 9028.83 9689.560000000001 12601.599999999999 12635.099999999999 13630.2 True False 10950.573719341135 10366.697531758582 10696.420502206962 9924.032307836727 10191.73585039368 9668.709250147707 10669.251539931467 11063.08480303297 9747.357720620103 9780.822134541944 10245.445165617293 1.0688236130617519 1.011834758195593 1.0440171538961622 0.968628707431943 0.9947577372817477 0.9437080667412037 1.0413653450351212 1.0798051840792233 0.951384499458479 0.9546507717756786 1.0 13.322695050504327 -2.0000003336718146 0.5169944973487293 0.9860973023900486 3.863082528447359 0.20959489468918513 0.040810401170177535 111.74542829101583 1.0159295243391548 0.0076959087637588 354.16886189309037 0.009999992316925489 2.0000003336718146 2.8769852260573106 KAS(ph)PEAASTPR ddPTM_A549_PD325901_60min_R1 2 KASPEAASTPR 11 1 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;P29590-14;P29590-10;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;H3BT29 H3BT57;P29590-2 PML Protein PML 1 KAS(0.995)PEAAS(0.004)T(0.001)PR;KAS(0.987)PEAAS(0.013)T(0.001)PR 79.089 0.0007994 6370200.0 1760.73 1718.8000000000002 1856.24 2044.35 2653.5 1822.51 2076.3 1670.12 2032.96 2069.9 2385.5 True False 1939.478013419082 1863.6493081291246 1982.2156088778997 2170.6248564442835 2467.127314078043 1807.6680828112646 2155.3147326949565 1636.8081464162065 1947.521761008836 1939.206160748657 2092.098622930421 0.9270490368673147 0.8908037545183672 0.9474771347544759 1.0375346710012505 1.1792595659865768 0.8640453480530703 1.0302166012020926 0.7823761884243846 0.9308938592392577 0.9269190942979515 1.0 11.030735147460579 -5.96756380557644 7.57308105533134 0.9702826129280853 0.9109504176529706 0.0532200354779232 0.09693707462501346 0.49707420140662295 91.82508173514996 0.0130640880292396 0.04061474772960448 1.0775469312731088e-06 5.96756380557644 -0.059332195275114685 KAS(ph)PEAASTPRDPIDVDLDVSNTTTAQK ddPTM_A549_MK2206_60min_R1 1 KASPEAASTPRDPIDVDLDVSNTTTAQK 28 2 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5 H3BT57 PML Protein PML 1 KAS(0.892)PEAAS(0.054)T(0.054)PRDPIDVDLDVSNTTTAQK 123.09 1.987e-21 4751200.0 1950.4 2038.0 1822.9 1893.4 2241.1 1708.6 1774.2 1824.9 3035.7 3305.8 2742.3 True False 2279.579837298204 2141.7254949981893 2081.4146307418696 2357.2830849979573 1911.4371587672185 1889.4029179231118 2096.5491743832154 2083.5851635218605 2348.1187970167634 2559.0174840221885 2061.3112263702874 1.1058882366406457 1.0390112214008078 1.0097527263784334 1.1435842656078867 0.9272918782541254 0.9166024488452019 1.0170949187886478 1.0108057128232861 1.139138411986194 1.2414512914327351 1.0 11.009346630802181 -13.025215209578857 11.690316133694 0.5172854089563563 1.0452754241509936 0.0 0.09363560541651299 0.0 0.0 0.0 0.010641994950381832 9.435931737916952e-14 13.025215209578857 0.5279900151946373 KAS(ph)PEAASTPRDPIDVDLDVSNTTTAQK ddPTM_A549_PD325901_60min_R1 2 KASPEAASTPRDPIDVDLDVSNTTTAQK 28 2 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5 H3BT57 PML Protein PML 1 KAS(0.983)PEAAS(0.008)T(0.008)PRDPIDVDLDVSNTTTAQK;KAS(0.969)PEAAS(0.012)T(0.019)PRDPIDVDLDVSNTTTAQK 206.5 1.3159999999999997e-78 35769000.0 4682.4 4642.4 5166.700000000001 4826.1 5882.9 5758.0 5499.8 5461.6 5414.9 6031.9 6759.299999999999 True False 5157.753800999303 5033.631340504217 5517.343331891056 5124.1972361316575 5469.705398903235 5711.108757058819 5709.097898606042 5352.664103457686 5187.330583821985 5651.044804589506 5927.948950733008 0.8700739233527867 0.8491354062490356 0.9307339482417135 0.864413185524824 0.9226977904772425 0.9634207049560748 0.9630814883957621 0.9029538121774503 0.8750633021528561 0.9532883720077816 1.0 12.533317308412203 -10.889896443438616 1.042408366297226 1.0021978323477796 0.9041535888966097 0.3179792951600694 0.03875855806850458 0.4141541453381807 0.7691669002996171 0.03088585882307045 0.006756970023440715 1.2885567685836722e-11 10.889896443438616 -0.09804424345116991 KAS(ph)PEAASTPRDPIDVDLPEEAER ddPTM_A549_MK2206_60min_R1 2 KASPEAASTPRDPIDVDLPEEAER 24 2 P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;H3BT29 P29590-2 PML Protein PML 1 KAS(1)PEAASTPRDPIDVDLPEEAER;KAS(0.97)PEAAS(0.015)T(0.015)PRDPIDVDLPEEAER 162.29 1.8961999999999998e-34 39465000.0 3406.3 4082.8 4052.0 4049.0 6007.2 3738.0 4034.0 3711.9 6795.5 6052.6 6317.0 True False 3981.20016396066 4290.597080951232 4626.634529467362 5041.005181766515 5123.548837689723 4133.552678916418 4766.925583058224 4238.0731922169925 5256.330100183619 4685.313456286741 4748.314559669296 0.8384449079628662 0.9036042214629643 0.9743740586953851 1.0616409503665243 1.0790247304185678 0.870530506556058 1.003919500941872 0.8925426356993839 1.1069886028253582 0.98673190190101 1.0 12.213199796441153 -5.716517910393657 2.0527626442042775 1.0266036499831508 0.842862802047968 0.28575762639709423 0.07153076159294021 0.28891028271990865 2.200138351987783 0.010960237772115303 0.07018681193500227 1.9207997459424492e-06 5.716517910393657 -0.18374084793518275 KAS(ph)PEAASTPRDPIDVDLPEEAER ddPTM_A549_PD325901_60min_R1 2 KASPEAASTPRDPIDVDLPEEAER 24 2 P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;H3BT29 P29590-2 PML Protein PML 1 KAS(0.999)PEAAS(0.001)T(0.001)PRDPIDVDLPEEAER;KAS(1)PEAASTPRDPIDVDLPEEAER 131.1 2.9129999999999996e-23 80674000.0 3484.8 3401.7 2897.6000000000004 3948.0 3633.6 3123.0 2972.2 3539.2 4235.4 3626.8 4082.1000000000004 True False 3838.5743306258305 3688.3731972671885 3094.24856068429 4191.8589934414495 3378.388471239488 3097.567323427349 3085.3086974502476 3468.6078795513104 4057.400867000246 3397.8032290464416 3580.027578563939 1.0722192068044354 1.0302639061642955 0.8643085822052493 1.170901313314166 0.94367666089172 0.8652356037631085 0.8618114329409331 0.968877418799851 1.1333434667639617 0.9490997358208638 1.0 11.805754985923736 -8.723943235422672 22.42085027313528 1.0629677269862832 0.9689358024166161 0.024757124956018117 0.10041573483053622 78.12924616640609 46716.90379145396 0.017058302219451246 0.019341756137429292 1.888238135642315e-09 8.723943235422672 -0.09403192456966702 KAS(ph)PEPEGEAAGK ddPTM_A549_MK2206_60min_R1 4 KASPEPEGEAAGK 13 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK 187.0 2.1300999999999998e-25 1388386000.0 20706.0 22273.8 20248.100000000002 17221.0 25199.8 21323.800000000003 18913.5 19140.1 29600.2 28320.5 30404.5 True False 24200.666586903517 23407.441280908082 23119.585048397876 21440.145773080076 21492.942801973193 23580.27036240716 22349.838129690557 21853.267789097892 22895.801961806377 21922.879380558534 22854.223528488994 1.058914408390909 1.0242063683209133 1.0116110494665502 0.9381261956396727 0.9404363607094814 1.0317686064903107 0.9779303200491719 0.9562025925692309 1.001819288818347 0.9592484887194049 1.0 14.48017318380631 -5.596528046243524 2.221309850188764 0.990480715842304 1.0567073315312479 0.37827721955295013 0.029828623180306955 0.3209775186799939 2.738936070396863 0.004150772729441677 0.03158562577597642 2.5320481132145327e-06 5.596528046243524 0.06622661568894384 KAS(ph)PEPEGEAAGK ddPTM_A549_PD325901_60min_R1 6 KASPEPEGEAAGK 13 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK 181.94 1.8742e-25 2100586200.0 45783.5 43131.009999999995 43780.50000000001 43761.600000000006 53206.9 48413.399999999994 48911.700000000004 51276.4 49208.689999999995 48376.200000000004 56882.7 True False 50431.407215968655 46765.81158099276 46751.70800353347 46464.65464219536 49469.830897840235 48019.13732181158 50773.061509009254 50253.65197644236 47140.619887129054 45321.718476066075 49886.48850914452 1.0109231722478171 0.9374444459529414 0.9371617325794254 0.9314076021542003 0.99164788655694 0.9625679970040256 1.0177718060813645 1.0073599781878921 0.9449576688182387 0.9084968661957097 1.0 15.606361501717267 -6.772150914458157 24.994837959569104 0.9795188619239599 0.9518155004644323 0.0753974279774915 0.03524253477880222 311.61911604284126 727148.467063357 0.004515890531022223 0.008594809516687816 1.6898536166573596e-07 6.772150914458157 -0.027703361459527565 KAS(ph)PEPPDSAEGALK ddPTM_A549_MK2206_60min_R1 6 KASPEPPDSAEGALK 15 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 KAS(1)PEPPDSAEGALK;KAS(0.995)PEPPDS(0.005)AEGALK;KAS(1)PEPPDSAEGALK;KAS(0.945)PEPPDS(0.055)AEGALK;KAS(1)PEPPDSAEGALK;KAS(0.999)PEPPDS(0.001)AEGALK 172.57 1.1206e-27 649227500.0 37934.9 41490.299999999996 36936.00000000001 32472.600000000002 50241.5 36197.799999999996 35226.100000000006 36052.6 51752.6 53199.1 54999.0 True False 44337.38370074017 43601.97905060025 42174.080202469566 40428.388457750414 42851.04190451261 40028.22716984501 41626.22639597603 41163.166456456915 40030.718731920075 41181.386361620425 41341.23040482057 1.0724737330403749 1.054685083720103 1.0201457428696143 0.9779193328758857 1.036520719990859 0.9682398607366448 1.0068937471953479 0.9956928241704462 0.9683001289495321 0.9961335441244752 1.0 15.335293706690102 -5.236225773086311 0.6728431316964679 0.9867701884311657 1.1390429423652146 0.6587891967224744 0.019058088136166086 1.2867621939010006 0.38877930373850533 0.0031933799861689127 0.15059692248549963 5.804625787829871e-06 5.236225773086311 0.15227275393404893 KAS(ph)PEPPDSAEGALK ddPTM_A549_PD325901_60min_R1 4 KASPEPPDSAEGALK 15 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 KAS(1)PEPPDSAEGALK;KAS(0.991)PEPPDS(0.009)AEGALK;KAS(1)PEPPDSAEGALK;KAS(0.999)PEPPDS(0.001)AEGALK 176.48 5.937499999999999e-28 1041273000.0 38228.600000000006 36444.6 38726.5 41683.4 43492.700000000004 43282.8 41383.2 43416.3 43784.7 46147.8 48598.6 True False 42109.539329592124 39515.91434433481 41354.71317136253 44258.08894813 40437.92279366958 42930.31922716661 42958.06032175595 42550.32783707152 41944.58132439576 43234.0200323672 42621.280291907926 0.987993299149839 0.927140481789734 0.9702832220930288 1.0384035543984547 0.9487730663348263 1.007250813047898 1.0079016873153845 0.9983352810063315 0.9841229788763374 1.0143763804433537 1.0 15.379286310141776 -6.008534013391111 24.835788362588005 0.9946061115377367 0.9553531261095478 0.310158312082926 0.024791199651087326 300.32122638464864 874007.7200784917 0.0029477814424986653 0.008585291504646727 9.80541516550983e-07 6.008534013391111 -0.03925298542818889 KAS(ph)PEPPDSAEGALKLGEEQQR ddPTM_A549_PD325901_60min_R1 1 KASPEPPDSAEGALKLGEEQQR 22 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 KAS(1)PEPPDSAEGALKLGEEQQR 67.911 0.00015666 8278100.0 1933.4 2091.0 2329.2 2606.4 2367.2 4253.0 2923.2 3294.8 3240.9 2691.1 2994.8 True False 2129.677344706145 2267.2159083651377 2487.273518617424 2767.39140843612 2200.936038396665 4218.364978077658 3034.443975636419 3229.082629279401 3104.6962435333376 2521.1834867340003 2626.4585856013523 0.8108551021445234 0.8632216478852407 0.947006563230442 1.0536588787683092 0.8379861957323572 1.6061037479149223 1.1553366926368858 1.2294435735563187 1.1820845988411 0.9599174723544144 1.0 11.358903120699123 -6.342653141582208 1.2769160362928345 1.1311950884314523 0.8368170025479708 0.313343331024164 0.18144862306966794 0.4974529170138008 1.483534369804141 0.027364241588978773 0.11235385473287161 4.543043114828338e-07 6.342653141582208 -0.2943780858834816 KAS(ph)PGLER ddPTM_A549_PD325901_60min_R1 2 KASPGLER 8 1 Q9BZ72-3;Q9BZ72 Q9BZ72-3 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 1 KAS(1)PGLER;KAS(1)PGLER 69.229 0.0029971999999999998 59722000.0 10516.4 10667.9 11327.8 10853.7 13208.5 11442.0 11716.1 12198.4 12501.9 12600.3 12751.7 True False 11584.0171862355 11566.921371998307 12096.572627595078 11524.108398458835 12280.780526851273 11348.820145583015 12161.962596795925 11955.093342540324 11976.488619528362 11804.714907619344 11183.321739686384 1.0358297343022123 1.0343010459004 1.081661863010507 1.030472758157632 1.0981335253255144 1.0147986805484925 1.087508960207827 1.0690109451215326 1.070924086626897 1.0555642753018377 1.0 13.449061149625827 -10.778084439975164 0.9979079437237147 0.9995863480265074 1.0588746652696488 0.02272169059837914 0.029883725550690216 0.39403870394024126 0.6889889412281999 0.01665173391993064 0.004088949736571008 1.666923080806812e-11 10.778084439975164 0.05928831724314143 KAS(ph)PPSGLWSPAYASH ddPTM_A549_PD325901_60min_R1 1 KASPPSGLWSPAYASH 16 1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 1 KAS(0.995)PPS(0.005)GLWSPAYASH 161.51 7.155e-21 9302000.0 2221.6 2025.5 2680.4 2942.4 3508.0 3393.9 2228.1 2802.0 3209.8 3145.0 3058.2 True False 2447.1351965445183 2196.1959934928673 2862.3080625545867 3124.1453653247536 3261.6101819430096 3366.2612036439596 2312.8915647631015 2746.1119118735223 3074.903268380175 2946.4241632709427 2682.0607875270657 0.9124085508892752 0.818846464519479 1.0672047687605597 1.1648301857488108 1.2160836164158324 1.2551025015162858 0.8623561313446783 1.0238813097168888 1.1464703867563424 1.0985672573020342 1.0 11.389126220215445 -5.782586938921857 12.163909748944437 1.0821380459966474 0.8656397342745132 0.4056920822578537 0.10537762611151033 0.5339709659572254 307.07616846417505 0.015506418018173032 0.04904941558492014 1.6497307181305516e-06 5.782586938921857 -0.21649831172213418 KAS(ph)QLVGIEK ddPTM_A549_PD325901_60min_R1 1 KASQLVGIEK 10 1 Q9NPD8 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T 1 KAS(1)QLVGIEK 64.39399999999999 0.0025402 4554800.0 4678.8 3753.5 4183.4 3954.4 5257.8 5611.3 4641.5 4759.5 4928.1 4499.7 4394.6 True False 5153.788331649486 4069.8206179093945 4467.310680827804 4198.654306905998 4888.510266425302 5565.603433220583 4818.134822426258 4664.568038744478 4720.989094929387 4215.588174076394 3854.092059664655 1.3372250200214257 1.0559738986264666 1.1591084519181167 1.0894016650114278 1.2683947842311405 1.4440764120473153 1.250134856105509 1.2102897301187825 1.2249289902380174 1.093795402085749 1.0 11.912175317228632 -10.544333378137365 0.7879452961450374 0.9958879523426134 1.2238651931111104 0.2887599873223152 0.10540980392902263 0.5797291188756204 0.6282277065189856 0.07898201549213868 0.020677607896376266 2.8553978084895517e-11 10.544333378137365 0.227977240768497 KAS(ph)SPNLHR ddPTM_A549_MK2206_60min_R1 1 KASSPNLHR 9 1 A0A087X030;P51956-2;P51956 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 KAS(0.5)S(0.5)PNLHR 67.02199999999999 0.0011244000000000002 11773000.0 974.75 1048.6 934.19 762.81 1549.5 1197.9 1224.1 1948.7 1566.0 1739.2 1595.8 True False 1139.2639696505455 1101.9692610672719 1066.6721893097522 949.6984842438422 1321.5706026102384 1324.6609828983346 1446.503124992952 2224.934192643458 1211.303500388132 1346.313512073141 1199.5188181605608 0.9497674837628517 0.9186760927661982 0.889250066910558 0.7917328764380593 1.1017506208338121 1.1043269708179126 1.20590281960823 1.8548555962259534 1.0098245080020027 1.1223779833130814 1.0 10.228240075602281 -6.779042661686047 24.217200476540256 1.0988930077011603 0.8897289991161157 0.2236046280518803 0.23650463227825907 269.9753703430371 371410.5778054337 0.037621709238854086 0.07122430566228101 1.6632492577740061e-07 6.779042661686047 -0.20916400858504458 KAS(ph)SRLENLGIPEEELLR ddPTM_A549_PD325901_60min_R1 2 KASSRLENLGIPEEELLR 18 2 Q01658 Q01658 DR1 Protein Dr1 1 KAS(0.5)S(0.5)RLENLGIPEEELLR;KAS(0.5)S(0.5)RLENLGIPEEELLR 71.17399999999999 0.00021248 7618800.0 570.55 647.1 843.79 751.78 819.94 866.8899999999999 1103.1399999999999 965.49 954.82 1020.0 1205.76 True False 628.4718159832893 701.6333879976473 901.0546635214642 798.2157431837418 762.3502430394394 859.8303352564632 1145.1205963613704 946.232544537747 914.6922358759922 955.5970259257115 1057.4591639423961 0.594322539737832 0.6635087310434127 0.8520940517099233 0.7548430903070066 0.720926414025542 0.8131097299784726 1.082898172722015 0.8948171019768022 0.8649905992264104 0.9036727454922 1.0 10.046386236314333 -7.542687173150382 8.365342888750499 0.9412822101616908 0.7279014947552257 0.6536508260727805 0.08039437069865982 0.10489232342155728 36.30047974752582 0.013374773850176469 0.020008116500579355 2.8662418104157934e-08 7.542687173150382 -0.21338071540646508 KAS(ph)VHSSGR ddPTM_A549_MK2206_60min_R1 1 KASVHSSGR 9 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 KAS(0.999)VHS(0.001)S(0.001)GR 45.915 0.0092723 2684200.0 197.37 239.13 115.0 296.24 319.84 399.88 405.98 596.56 310.38 293.55 361.48 True False 230.68123076678967 251.30069559318792 131.30872924204016 368.8188132987188 272.7919596894859 442.19503618113885 479.7413109097614 681.1242068883782 240.07942557501184 227.2368511206708 271.7145396595307 0.8489837572028445 0.9248702550407418 0.4832598557536718 1.3573760674009703 1.0039652645430945 1.6274250054311672 1.765607801153728 2.50676392857686 0.8835722441494704 0.8363072929605009 1.0 8.085947957150815 -6.271647328167208 24.622395861555585 1.1891335108630838 0.7696211746695276 0.17466983982031548 0.4944412780531401 1005.9506336960374 2426435.3635193673 0.0782854492048804 0.18387350040064532 5.349986323794591e-07 6.271647328167208 -0.4195123361935562 KASATCSSATAAASSGLEEWTSRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 KASATCSSATAAASSGLEEWTSRSPR 26 2 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 KASATCSSATAAASSGLEEWT(0.029)S(0.072)RS(0.899)PR 138.28 4.1887e-25 17246000.0 3068.9 3514.8 3316.0 3097.3 3218.1 3137.9 2916.1 2940.1 3238.8 3734.9 4385.9 True False 3380.452468795227 3811.0045311916733 3541.043700727879 3288.613186521329 2992.071757842306 3112.3459827674274 3027.073781251149 2881.457399036169 3102.6844992303922 3499.0777765979783 3846.462104510811 0.8788472047679642 0.9907817697521168 0.9205975788960035 0.8549709049946748 0.77787631245176 0.8091451048269854 0.7869761092150754 0.749118883988753 0.8066333204197753 0.9096873130491916 1.0 11.909316379591097 -4.26474715013622 22.66857272233923 0.8781442358582703 0.859990566563103 0.0 0.08298866685685899 0.0 0.0 0.013608365769699187 0.0 5.435667084488437e-05 4.26474715013622 -0.018153669295167263 KASDVHEVR ddPTM_A549_MK2206_60min_R1 2 KASDVHEVR 9 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 61.353 0.0024115 10964200.0 1803.1599999999999 2001.3700000000001 1537.8600000000001 1682.49 2537.1 1967.94 1552.29 1823.26 2742.3 2963.6000000000004 2963.1000000000004 False True 2107.4893249705856 2103.2311844575684 1755.9516726275124 2094.7001255298455 2163.8959508760468 2176.1861045871506 1834.3209998327825 2081.712688499571 2121.1734285532402 2294.120701690409 2227.280492600299 0.9462163979670741 0.9443045864430366 0.7883837165823147 0.9404743284418259 0.9715417335468814 0.977059742505311 0.823569822448027 0.934643254594853 0.952360259787854 1.0300097851672358 1.0 11.121067540049408 -9.44499936938044 0.7729115945939695 0.9931861764163478 0.9138098835339876 0.2855920393260478 0.057418076339338694 0.5913219141052901 0.7626966537445397 0.019208133568636435 0.01290484776711136 3.589224558198444e-10 9.44499936938044 -0.07937629288236014 KASDVHEVR ddPTM_A549_PD325901_60min_R1 1 KASDVHEVR 9 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 34.378 0.050756 14117000.0 900.67 854.85 791.56 675.27 1043.4 846.59 894.02 985.32 806.83 1194.6 997.09 False True 992.1053553617901 926.8912095963359 845.2800216369595 716.9798942505591 970.1151835345892 839.6956517260197 928.0424203265155 965.667019631413 772.9217409269045 1119.1727521282885 874.4542510742799 1.1345423207022827 1.0599653537708078 0.9666372146953607 0.8199169863600512 1.1093950110515083 0.9602510945477608 1.0612818442890544 1.1043082224657002 0.8838904264887029 1.279852834786232 1.0 9.772239098250134 -8.771918036508223 24.9808434732075 0.9451704870299292 1.0208780601726144 0.0 0.13370678974702416 329.22733293471487 784866.8231088857 0.016051747161671057 0.017178228874217667 1.690759995141746e-09 8.771918036508223 0.07570757314268517 KASESTTPAPPT(ph)PRPR ddPTM_A549_PD325901_60min_R1 1 KASESTTPAPPTPRPR 16 2 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KASESTTPAPPT(1)PRPR 49.768 0.0076667 20839000.0 1246.9 978.86 844.77 1305.9 1173.6 1411.1 1071.5 1134.2 1431.7 1293.8 1724.6 True False 1373.4843700807355 1061.3519675094687 902.101172214683 1386.5624770859147 1091.1703847002047 1399.6084694487133 1112.2765188472983 1111.5774912373126 1371.5306278708633 1212.1092471987108 1512.4851331401399 0.9080977657143522 0.7017272066046343 0.5964363896534899 0.9167445330237453 0.7214420563822507 0.9253700673030233 0.7353966624042446 0.7349344908465418 0.9068060226306923 0.8014024208503756 1.0 10.562705246255662 -9.028494624518324 2.021068602785927 0.9668635656569079 0.777310056170055 0.13219639763905344 0.1109778790008697 0.20739122677020397 1.7166668676047894 0.01898623417887356 0.01872167449909893 9.364948112908344e-10 9.028494624518324 -0.1895535094868529 KASGPPVSELITK ddPTM_A549_MK2206_60min_R1 2 KASGPPVSELITK 13 1 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 0 ; 125.36 2.8508999999999997e-06 23684000.0 4378.9 4950.0 5387.6 4709.700000000001 7246.3 5457.200000000001 5736.4 4886.8 7162.200000000001 6775.6 7637.8 False True 5117.95126617366 5201.933856840546 6151.642692734053 5863.576711426465 6180.37886911557 6034.677281803815 6778.629626835692 5579.518865197341 5539.9731356831935 5244.987254141427 5741.123467443745 0.8914546595620326 0.9060829097892098 1.0715050333995155 1.0213291430984053 1.0765103562330118 1.0511317716862787 1.1807148313871572 0.9718513975247499 0.9649632458000221 0.9135820338796469 1.0 12.487117366913566 -5.682414572704472 7.983600283348858 1.0131178270549326 0.8966441729729946 0.3311666009557933 0.06823044363749009 0.23315176238616525 20.474429108646927 0.009345224997858004 0.036459394010462595 2.0777123789199217e-06 5.682414572704472 -0.116473654081938 KASGPPVSELITK ddPTM_A549_PD325901_60min_R1 2 KASGPPVSELITK 13 1 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 0 ; 148.57 1.1671e-12 56521000.0 7997.0 8094.8 8563.6 8637.8 10616.900000000001 10612.3 9787.8 9607.9 11394.9 10083.5 9543.0 False True 8808.849552919757 8776.977204703075 9144.777393110158 9171.337288132861 9871.205570316633 10525.876947296847 10160.28008508967 9416.262897248263 10916.011979832152 9446.826089139118 8369.27149806121 1.0525228575701453 1.0487145992021303 1.0926610990249985 1.095834600449687 1.1794581610362807 1.2576813823921504 1.2139981463671428 1.125099466474423 1.3042965546476666 1.1287513006750383 1.0 13.030886333736944 -6.506420283905012 2.5505091900197487 1.1613672576368337 1.0621073381947461 0.2855531685888364 0.07553594579889068 0.4768910102038184 6.164552670827592 0.016446805423045253 0.041158182927140456 3.115872771568859e-07 6.506420283905012 -0.09925991944208756 KASGS(ph)ENEGDY(ph)NPGR ddPTM_A549_PD325901_60min_R1 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(0.024)GS(0.986)ENEGDY(0.99)NPGR 135.14 7.3334e-10 22623000.0 6476.3 5738.7 7627.2 6165.0 7126.4 7493.6 7395.1 7248.8 7618.4 9499.4 9858.8 True False 7133.769208399927 6222.320388969399 8144.827658079513 6545.798048269133 6625.866248745348 7432.574606095165 7676.52457725399 7104.2169974264125 7298.225141699643 8899.606262822252 8646.230100082345 0.8250727919364518 0.7196570432366979 0.9420091258040824 0.7570696098183638 0.7663300851410656 0.859631830296117 0.8878464357756198 0.8216548617366491 0.8440933282159744 1.0293048137520067 1.0 13.077855515509647 -12.119528989945277 0.24509960946507825 1.223130094907178 0.7964387378522818 0.6211529949097645 0.058027641929040634 5.735679868450182 0.2466976956391968 0.7576546458829506 0.035836598184449904 7.594007295983093e-13 12.119528989945277 -0.42669135705489614 KASGS(ph)ENEGDYNPGR ddPTM_A549_MK2206_60min_R1 4 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.122)GS(0.878)ENEGDYNPGR;KAS(0.14)GS(0.86)ENEGDYNPGR;KAS(0.137)GS(0.863)ENEGDYNPGR;KAS(0.039)GS(0.961)ENEGDYNPGR 183.23 2.4391999999999997e-33 306257900.0 10911.599999999999 11196.900000000001 9262.2 8733.6 11454.400000000001 10417.6 8253.64 8859.09 13400.1 15564.8 13637.3 True False 12753.211316992967 11766.774384173323 10575.71923465761 10873.3323920662 9769.472933551933 11519.983517356788 9753.219551153361 10114.893137325267 10364.998745562585 12048.700869776927 10250.782039667252 1.2441208161135524 1.1478904086185486 1.0316987712481793 1.0607319861050482 0.95304659642037 1.123815087744343 0.9514610215505038 0.986743557533841 1.011142243143338 1.1753933332259239 1.0 13.323446357739812 -5.2218980526014604 0.9871122755269791 1.0057078203937917 1.3947189332641095 0.4528492298159753 0.06849733435823113 0.7024967012935757 0.4943717301385676 0.006068309524427789 0.29463633723361726 5.999318892750605e-06 5.2218980526014604 0.38901111287031775 KASGS(ph)ENEGDYNPGR ddPTM_A549_PD325901_60min_R1 4 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.071)GS(0.929)ENEGDYNPGR;KAS(0.323)GS(0.677)ENEGDYNPGR;KAS(0.072)GS(0.928)ENEGDYNPGR;KAS(0.244)GS(0.756)ENEGDYNPGR 233.14 5.7006e-55 488267000.0 18665.100000000002 17933.5 16871.2 17376.800000000003 20450.1 18960.0 17871.800000000003 19999.9 19712.6 20137.0 21910.1 True False 20559.967211479616 19444.818982623714 18016.181086767243 18450.125470423864 19013.755525015054 18805.59604616797 18551.921128824222 19600.98630488197 18884.147974413052 18865.54638339809 19215.29659956732 1.0699791754420578 1.011944774407571 0.9375957843488569 0.9601790622810015 0.9895114252591447 0.9786784163712272 0.9654766988734363 1.020072014153731 0.9827664057414693 0.981798344128755 1.0 14.229967624980736 -11.01906813083846 1.0758017654509062 1.000610575696341 0.9879682961112334 0.0 0.03381603392393353 2.9586993936443666 5.5723084527819795 0.03053122724537647 0.005615697229108551 9.570439212876314e-12 11.01906813083846 -0.012642279585107663 KASGS(ph)ENEGDYNPGRK ddPTM_A549_MK2206_60min_R1 1 KASGSENEGDYNPGRK 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.373)GS(0.627)ENEGDYNPGRK 153.19 4.3284000000000005e-16 37664000.0 6074.0 5699.7 5336.1 5064.6 7623.2 5268.8 5317.6 3954.2 9348.6 10442.0 11332.0 True False 7099.142704957593 5989.790384612946 6092.839218334353 6305.427227358535 6501.837378391978 5826.34091885362 6283.739087870695 4514.719959229624 7231.157026646541 8083.144947716042 8517.95165271053 0.8334330827879902 0.7031961002862598 0.715293942340648 0.7402515868180657 0.7633099650575034 0.6840072773833599 0.7377054183996363 0.5300241352970086 0.8489314475441391 0.9489540769046129 1.0 13.056290825938843 -9.310789632109914 1.6054131238826224 0.955636183355241 0.7170085697505046 0.6154771790142565 0.07696993329117277 0.1500537080559793 0.7979159166158905 0.01726461255115099 0.015038535748445724 4.888891149798179e-10 9.310789632109914 -0.2386276136047364 KASGS(ph)ENEGDYNPGRK ddPTM_A549_PD325901_60min_R1 1 KASGSENEGDYNPGRK 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.001)GS(0.999)ENEGDYNPGRK 121.63 1.6954e-08 15966000.0 1957.5 2428.5 1972.5 2287.8 2982.2 2653.3 2406.8 2347.7 2811.7 2472.9 2718.4 True False 2156.2239589646633 2633.1582178214926 2106.365711606075 2429.1122100292177 2772.7405600314855 2631.6924044988127 2498.392091051496 2300.873281764978 2693.5340269501344 2316.7606719722467 2384.054033357392 0.9044358595883489 1.1044876420494942 0.8835226392246416 1.0188998135282914 1.1630359552407954 1.1038728014031958 1.0479595076681567 0.9651095359297401 1.129812491354028 0.9717735586343325 1.0 11.219201218773133 -6.522973569288122 24.999932492577567 1.064359923790863 0.9736873703949495 0.19194774534893122 0.07888453863044347 3.80075270432356 1002116.9161752769 0.010938884394451634 0.02295138039563875 2.99934505046321e-07 6.522973569288122 -0.09067255339591351 KASHT(ph)PK ddPTM_A549_MK2206_60min_R1 1 KASHTPK 7 1 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KAS(0.017)HT(0.983)PK 58.676 0.012255 3143100.0 344.86 429.38 357.22 348.54 1017.9 964.22 788.95 902.07 850.36 458.91 483.27 True False 403.0639369824955 451.23360796973645 407.87916747688377 433.9323156465551 868.1682584039762 1066.2531204025654 932.292002665787 1029.9411849735136 657.7548177458826 355.2419122731632 363.26072142652845 1.109572032450025 1.242175609291689 1.1228276095338308 1.194547855167216 2.389931548323394 2.935228219047132 2.566454195776155 2.8352671352105574 1.8106962271144345 0.9779254714853968 1.0 8.50486156855678 -6.575407058062131 24.64950363084201 1.7721228376469502 1.1652711459821197 0.23512098357056255 0.6560882019605325 147.40543883307853 69171.05612369014 0.11521859287989357 0.2398466723652665 2.6582323682784873e-07 6.575407058062131 -0.6068516916648306 KASHT(ph)PK ddPTM_A549_PD325901_60min_R1 2 KASHTPK 7 1 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KAS(0.024)HT(0.976)PK;KAS(0.002)HT(0.998)PK 55.567 0.015134 6076500.0 1165.59 1354.9699999999998 1214.49 1299.4099999999999 1395.63 1051.1100000000001 1107.35 1823.27 1001.6100000000001 1316.6399999999999 930.96 True False 1283.919838737993 1469.1580771676288 1296.9125947216535 1379.6716045257735 1297.605763462123 1042.55010865441 1149.490810215171 1786.9034495223552 959.5158148926005 1233.5071257008121 816.4578218416707 1.5725488866551314 1.7994292391659286 1.5884624533282425 1.6898259378710716 1.5893114484899349 1.2769185140547084 1.407899807515204 2.1886047285231047 1.1752178608911312 1.5108032438447465 1.0 9.673234547954117 -8.972088281630542 23.780255830352417 1.077301346873843 1.6267087834779796 0.2992103913076751 0.2557462901965099 54.79078676226409 46681.29562840176 0.03819813519031362 0.03998664330168502 1.0663793299078588e-09 8.972088281630542 0.5494074366041366 KASPPS(ph)GLWSPAYASH ddPTM_A549_MK2206_60min_R1 2 KASPPSGLWSPAYASH 16 1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 1 KAS(0.133)PPS(0.862)GLWS(0.004)PAY(0.001)ASH;KAS(0.442)PPS(0.527)GLWS(0.022)PAY(0.008)ASH 85.146 3.5399e-05 10889100.0 3473.4 3988.3 3679.9 3682.8 6360.299999999999 4146.2 4128.1 3976.3 6479.7 5812.0 5757.8 True False 4059.625003523164 4191.287434593365 4201.765154241598 4585.086165327171 5424.708295438465 4584.948131975188 4878.122335008091 4539.952701908038 5012.058295954649 4499.0651633906955 4327.979352804156 0.9379954645330917 0.9684166889284657 0.9708376153687557 1.0594057391601075 1.2534043841784326 1.059373845904449 1.1271131254005382 1.0489774400070881 1.1580596595746855 1.0395301817869558 1.0 12.079477901276421 -6.292708652519049 4.181050134758214 1.0894798769796434 0.9582603116623317 0.45922523423517203 0.0653107593251767 0.1761283940417494 7.123731052779485 0.010653002462993302 0.026971091895420966 5.096726715133894e-07 6.292708652519049 -0.13121956531731171 KASS(ph)PNLHR ddPTM_A549_MK2206_60min_R1 3 KASSPNLHR 9 1 A0A087X030;P51956-2;P51956 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 KAS(0.372)S(0.628)PNLHR;KAS(0.077)S(0.923)PNLHR;KAS(0.078)S(0.922)PNLHR 86.463 0.00042249 32126000.0 4168.26 5005.18 4430.5 4546.11 6142.700000000001 7043.8 6356.1 7640.7 8066.400000000001 7349.6 8985.5 True False 4871.76038382722 5259.922283147713 5058.811520929208 5659.907154082635 5239.116967185487 7789.170240703975 7510.921095308966 8723.792623662384 6239.373279393891 5689.320255481114 6754.152362815961 0.7212985615557052 0.7787686745276102 0.7489928046011792 0.8379892620193854 0.7756883004340723 1.1532417129921675 1.1120449601728395 1.2916191633001946 0.9237833179103103 0.8423440795921142 1.0 12.721559009254689 -7.236852650092587 23.449364005650935 1.0146350226569965 0.7752201222757641 0.5774708700914565 0.11721049655455867 241.15062052860986 229994.73276988338 0.017853985171015767 0.03091172669482114 5.7962532165207864e-08 7.236852650092587 -0.23941490038123237 KASS(ph)PNLHR ddPTM_A549_PD325901_60min_R1 1 KASSPNLHR 9 1 A0A087X030;P51956-2;P51956 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 KAS(0.027)S(0.973)PNLHR 101.71 0.00030212 16354000.0 2275.2 2195.5 2098.7 2757.3 3616.5 2840.2 2268.7 2787.9 2686.6 2429.5 3409.2 True False 2506.1766290862847 2380.5224901079205 2241.130402508323 2927.6121587173525 3362.4895162476923 2817.0703528653085 2355.0366199802743 2732.2931474347583 2573.6915449031662 2276.1009553789363 2989.8900126993904 0.8382169974284805 0.7961906558424505 0.7495695135905492 0.9791705200801648 1.124619802723748 0.9421986564388523 0.7876666399022667 0.9138440330010456 0.8607980674779191 0.7612657809188047 1.0 11.54587669849961 -13.896926887386925 0.01485130393030213 2.001121977861013 4.00416068515772e-06 0.0 0.11634550423818363 5896.624126166787 8.228153128511957 663.040468912512 462.2172448483092 1.2678652904949101e-14 13.896926887386925 -2.0011179737003277 KASS(ph)PSPLTIGTPESQR ddPTM_A549_PD325901_60min_R1 1 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.078)S(0.499)PS(0.423)PLTIGTPESQR 123.02 2.2918999999999999e-10 34344000.0 3937.2 4655.3 4379.5 4150.1 5355.9 4814.6 4602.9 4832.7 4233.3 4857.8 5011.8 True False 4336.90164558655 5047.61846877677 4676.719206072904 4406.442251439049 4979.7200608519315 4775.391493875543 4778.065878303525 4736.308007320191 4055.389122697299 4551.077678962663 4395.380372417811 0.9866954115738811 1.14839172974697 1.0640078468340464 1.0025167057419317 1.1329440546490603 1.0864569364331707 1.0870653899005347 1.0775649900613364 0.9226480484251038 1.035422942578962 1.0 12.101772305014956 -8.748794831546949 24.99112190107697 0.9634726907363306 1.0759437456218541 0.3302768397551107 0.05258032242015197 129.25663824454574 255467.01535863944 0.008330011874302034 0.009414291026050636 1.7832209938683027e-09 8.748794831546949 0.11247105488552356 KASVVDPSTESSPAPQEGSEQPAS(ph)PASPLSSR ddPTM_A549_MK2206_60min_R1 1 KASVVDPSTESSPAPQEGSEQPASPASPLSSR 32 1 Q66K14-2;Q66K14 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 KASVVDPSTESSPAPQEGS(0.009)EQPAS(0.904)PAS(0.078)PLS(0.007)S(0.002)R 65.301 0.00038103 3891600.0 778.74 879.88 648.72 683.5 922.05 327.91 699.5 767.65 725.07 954.78 1230.5 True False 910.1722736349489 924.6621337286587 740.7182507295333 850.9575306834815 786.417666432249 362.6092185509585 826.5900955253414 876.4667383295276 560.8428026988655 739.0945348764914 924.9328899276665 0.9840414191629925 0.9997072693576406 0.8008345889694338 0.9200208360522566 0.8502429473491315 0.3920384089480438 0.8936757515347781 0.947600358765565 0.6063605357819265 0.799079093115925 1.0 9.853204882018906 -5.790675056021408 1.3440229012440812 0.8009201158651855 1.0203614367465392 0.15861384808889778 0.16387448304861127 1.0526493085531101 2.9164686762359633 0.027927853720829978 0.24115149884231465 1.6192911562166028e-06 5.790675056021408 0.2194413208813537 KASVVDPSTESSPAPQEGSEQPAS(ph)PASPLSSR ddPTM_A549_PD325901_60min_R1 1 KASVVDPSTESSPAPQEGSEQPASPASPLSSR 32 1 Q66K14-2;Q66K14 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 KASVVDPSTESSPAPQEGSEQPAS(0.94)PAS(0.059)PLS(0.001)SR 150.63 9.345499999999999e-41 13007000.0 727.39 713.11 528.58 639.72 645.66 462.19 598.39 573.31 765.51 359.17 881.07 True False 801.2340973237834 773.2062823597623 564.4526174097538 679.2340514904677 600.3110690060787 458.42607787860635 621.1620589015721 561.8748822970055 733.3382768327334 336.49194490366426 772.703975562904 1.0369224472283782 1.0006500636889986 0.7304901168633925 0.8790352747902651 0.7768965709911878 0.5932751640686841 0.8038810185350272 0.7271541237867807 0.9490546186183483 0.4354732931955405 1.0 9.593772010414895 -8.899302465748043 6.316635519077124 0.9777977626747449 0.8145293718729217 0.0 0.20184887128894566 0.21310415031798657 11.480734000682512 0.02165993503989585 0.022939964190372992 1.260949036815809e-09 8.899302465748043 -0.1632683908018232 KASVVDPSTESSPAPQEGSEQPASPAS(ph)PLSSR ddPTM_A549_MK2206_60min_R1 4 KASVVDPSTESSPAPQEGSEQPASPASPLSSR 32 1 Q66K14-2;Q66K14 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 KASVVDPSTESSPAPQEGSEQPAS(0.003)PAS(0.956)PLS(0.036)S(0.005)R;KASVVDPSTESSPAPQEGSEQPAS(0.027)PAS(0.842)PLS(0.093)S(0.037)R;KASVVDPSTESSPAPQEGS(0.001)EQPAS(0.079)PAS(0.844)PLS(0.058)S(0.017)R;KASVVDPSTESSPAPQEGS(0.002)EQPAS(0.011)PAS(0.924)PLS(0.05)S(0.013)R 201.48 1.5855999999999997e-88 95720900.0 2118.08 1727.5100000000002 2019.57 1911.21 2580.95 2025.6400000000003 2231.19 1974.34 2905.8 3064.03 2998.1299999999997 True False 2475.560121915804 1815.4328802082055 2305.9753940464966 2379.4565357974775 2201.295673963792 2239.9918802889915 2636.568342008844 2254.2087411626667 2247.6409396090903 2371.8634949387474 2253.611576821481 1.098485713943377 0.8055660074167317 1.0232355112848994 1.0558414592249699 0.9767857498622385 0.9939565022328742 1.1699302440252324 1.0002649810408004 0.9973506360750899 1.052472182577288 1.0 11.138023164643071 KASVVDPSTESSPAPQEGSEQPASPAS(ph)PLSSR ddPTM_A549_PD325901_60min_R1 2 KASVVDPSTESSPAPQEGSEQPASPASPLSSR 32 1 Q66K14-2;Q66K14 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 KASVVDPSTESSPAPQEGSEQPAS(0.003)PAS(0.892)PLS(0.08)S(0.024)R;KASVVDPSTESSPAPQEGSEQPAS(0.001)PAS(0.969)PLS(0.022)S(0.008)R 139.72 3.8984e-31 179922000.0 1468.79 1514.65 1345.79 1437.98 1641.88 1148.6399999999999 1896.37 1224.8200000000002 1814.51 1777.88 1330.88 True False 1617.9004795339515 1642.2948711646384 1437.123402292693 1526.8007587104696 1526.5600129785034 1139.2858566703783 1968.5373980834815 1200.3900042472976 1738.252454828497 1665.6243533851011 1167.1901971434252 1.3861498181646763 1.4070499179859304 1.2312675396091408 1.3080993675642183 1.3078931066372883 0.9760927220419261 1.6865609417396317 1.0284442134496379 1.4892623833567884 1.427037647730028 1.0 10.188823956347907 -11.017048140738662 1.2806802717973917 0.9986458135739036 1.3261128344244455 0.0 0.2250364669545176 0.4434142366482715 1.2862405020211087 0.12689441955929912 0.028193470879433295 9.615056913518682e-12 11.017048140738662 0.3274670208505419 KAT(ph)VSPGPHAGEAEPPSR ddPTM_A549_PD325901_60min_R1 1 KATVSPGPHAGEAEPPSR 18 1 O15055 O15055 PER2 Period circadian protein homolog 2 1 KAT(0.5)VS(0.5)PGPHAGEAEPPSR 53.342 0.0029251999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KATGAAT(ph)PK ddPTM_A549_MK2206_60min_R1 8 KATGAATPK 9 1 P10412 P10412 HIST1H1E Histone H1.4 1 KATGAAT(1)PK;KAT(0.005)GAAT(0.995)PK;KATGAAT(1)PK;KAT(0.064)GAAT(0.936)PK;KATGAAT(1)PK;KAT(0.002)GAAT(0.998)PK;KATGAAT(1)PK;KAT(0.003)GAAT(0.997)PK 81.494 0.00098095 3150933500.0 37594.409999999996 35769.71 28929.160000000003 23547.960000000003 47461.399999999994 47505.1 49644.49999999999 50941.6 57752.9 51618.59999999999 47243.99999999999 True False 43939.427312921456 37590.23545421572 33031.74989251877 29317.211257108087 40479.89093173641 52532.058150666766 58664.26304118339 58162.72780210704 44671.9603624302 39957.922409325336 35512.010931932244 1.237311719607839 1.0585217358224777 0.9301571222151422 0.8255576208652882 1.1398929508477107 1.4792757935155447 1.6519555356532272 1.6378325607522093 1.2579394742825272 1.1251945851761198 1.0 15.116019437440942 -6.9944982482626745 24.733397306647277 1.237181182923769 1.0067983426348093 0.2689411873523537 0.22460666857548717 216.29813119255502 972364.6100123326 0.04015637004873331 0.07572154076993295 1.0127488337532754e-07 6.9944982482626745 -0.23038284028895983 KATGAAT(ph)PK ddPTM_A549_PD325901_60min_R1 7 KATGAATPK 9 1 P10412 P10412 HIST1H1E Histone H1.4 1 KAT(0.035)GAAT(0.965)PK;KATGAAT(1)PK;KAT(0.013)GAAT(0.987)PK;KATGAAT(1)PK;KAT(0.007)GAAT(0.993)PK;KAT(0.001)GAAT(0.999)PK;KAT(0.001)GAAT(0.999)PK 105.17 0.0017828 3636295700.0 41499.200000000004 41264.600000000006 35888.200000000004 36803.50000000001 37532.5 29962.500000000004 24653.700000000004 32148.699999999997 38283.69999999999 47231.299999999996 48365.9 True False 45712.16823390365 44742.11266012629 38323.78906527814 39076.76860818703 34896.34668009581 29718.495334035222 25591.910044522305 31507.468958332724 36674.76922415292 44249.107657455934 42417.20091670112 1.077679979960799 1.0548105884683627 0.9034964174212811 0.9212481673396122 0.8226932924835196 0.7006236784081153 0.6033380206954175 0.7427993426583493 0.8646202114131675 1.0431878271353245 1.0 15.372361801058387 -5.778669056817758 2.2030382854668185 0.8715104626717 1.0852664043005162 0.3072019498646562 0.12389267503651548 0.39402171760569454 3.6168424911818065 0.02024175362579281 0.10903583843059932 1.66468069520516e-06 5.778669056817758 0.21375594162881628 KATGAATPK ddPTM_A549_MK2206_60min_R1 2 KATGAATPK 9 1 P10412 P10412 HIST1H1E Histone H1.4 0 ; 83.045 0.0014796 13303700.0 8936.5 7598.5 6293.7 5235.4 11927.199999999999 11720.6 10259.199999999999 11444.9 11666.0 10856.0 12065.4 False True 10444.762723551781 7985.231194182403 7186.241297657634 6518.073235026038 10172.724679866296 12960.866112495389 12123.163842764228 13067.249623536269 9023.669626773917 8403.622060180556 9069.228191900249 1.1516705173302426 0.8804752758690131 0.7923762800538733 0.7187020876646754 1.1216747957617368 1.4291035398216985 1.3367360029149402 1.4408337012852608 0.9949765774813097 0.9266082937119007 1.0 13.14676406462245 -6.787116849101104 24.643752826676767 1.0981018771207898 0.878751666543905 0.2809941970458978 0.2004001253552589 256.7915094298285 246453.02964065166 0.03308572307509648 0.06254298204789276 1.632612626208715e-07 6.787116849101104 -0.21935021057688475 KATGAATPK ddPTM_A549_PD325901_60min_R1 2 KATGAATPK 9 1 P10412 P10412 HIST1H1E Histone H1.4 0 ; 90.913 0.001059 25029000.0 16117.6 16122.7 12785.3 11757.8 13558.4 12374.1 9712.8 11521.7 13837.5 17270.699999999997 19090.9 False True 17753.846886850002 17481.41651162057 13652.987342254572 12484.05260209876 12606.104757940746 12273.329432219778 10082.425919048093 11291.89065490121 13255.957996202469 16180.225054563896 16742.840327186088 1.0603844114801895 1.0441129563444036 0.8154522814199938 0.7456352899590073 0.7529251018103337 0.7330494224621513 0.6021932791580658 0.674431006581725 0.7917389007573694 0.9663966649846951 1.0 14.031256673169386 -5.757419578918905 20.86714910873297 0.8288431888149788 1.0522497420544887 0.40340803754408183 0.11559368599246592 12.77369481018694 66281.17654753097 0.020128932134615075 0.07206632750398653 1.7481569498276575e-06 5.757419578918905 0.22340655323950998 KATGPPVSELITK ddPTM_A549_PD325901_60min_R1 1 KATGPPVSELITK 13 1 P16401 P16401 HIST1H1B Histone H1.5 0 117.37 1.5525e-05 2854500.0 2955.0 3000.6 3070.9 3102.6 4347.0 3480.8 3499.3 3718.9 4026.0 3672.2 3464.3 False True 3254.9894246439762 3253.4710926066145 3279.3097408218464 3294.2405554841525 4041.6817163358824 3452.453518855562 3632.4677763904338 3644.7236220793866 3856.8012207921306 3440.3366652984287 3038.2130620070684 1.071349954138405 1.0708502090558931 1.0793547634396343 1.0842691043227726 1.3302825160214125 1.1363434520207227 1.195593495997544 1.1996273953452272 1.269430794377632 1.1323553006600906 1.0 11.56900733051352 -6.55808980719313 24.999864151718764 1.1552113023918695 1.0749276925052516 0.24256674194401728 0.08108216881982093 321.20080294680383 228051.63160295106 0.015959192982630162 0.03322177385265302 2.766369532289517e-07 6.55808980719313 -0.08028360988661798 KATQAS(ph)QEY ddPTM_A549_MK2206_60min_R1 2 KATQASQEY 9 1 P16104 P16104 H2AFX Histone H2AX 1 KATQAS(0.962)QEY(0.038);KATQAS(0.813)QEY(0.187) 93.928 0.0007737 56138000.0 14536.8 17766.800000000003 16472.9 14325.900000000001 21805.1 14576.6 14770.1 14226.1 23411.1 25037.0 25446.0 True False 16990.25644936246 18671.05423186154 18809.004921140906 17835.74614311408 18597.598675041307 16119.086136836017 17453.63598272886 16242.693240604052 18108.52322984457 19381.124311048316 19127.055926127094 0.8882839321944044 0.9761593370131435 0.9833716696278523 0.9324877917437824 0.9723189364254139 0.84273743952501 0.9125103230804914 0.8491998613553969 0.9467491128683724 1.0132831934983872 1.0 14.223327207878336 -9.774901814440206 1.1901617042927903 0.9900412597266314 0.9237647645735124 0.317025829312367 0.04621035646414183 0.41308019965386705 1.1897851486819357 0.013623628445366385 0.008993762427383922 1.6791836060600044e-10 9.774901814440206 -0.06627649515311895 KATQAS(ph)QEY ddPTM_A549_PD325901_60min_R1 1 KATQASQEY 9 1 P16104 P16104 H2AFX Histone H2AX 1 KATQAS(0.98)QEY(0.02) 97.439 0.00069353 53167000.0 9041.7 9055.7 10297.0 10296.0 11337.0 13332.0 12275.0 13740.0 12385.0 11374.0 12844.0 True False 9959.606727852259 9818.855619981916 10995.816340891128 10931.960536087425 10540.72823052678 13223.428612210511 12742.131842137735 13465.944921178527 11864.501519997653 10655.843698901019 11264.269424824293 0.8841768917479186 0.8716815311912762 0.976167732339432 0.9704988511723163 0.9357667002617172 1.1739268756363912 1.1311991360981224 1.195456572754036 1.0532863759322522 0.9459862239638532 1.0 13.459466126202045 -6.484139254631451 1.2388290060363527 1.055116822117111 0.8898183996508767 0.4520227465033809 0.0789536682894262 0.39057533848844983 1.1285182726022567 0.01264780554272581 0.04611623207611364 3.2799010765289763e-07 6.484139254631451 -0.16529842246623427 KATQVGEKT(ph)PKDESANQEEPEAR ddPTM_A549_MK2206_60min_R1 1 KATQVGEKTPKDESANQEEPEAR 23 3 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 KAT(0.027)QVGEKT(0.973)PKDESANQEEPEAR 85.0 4.3379000000000004e-06 6840200.0 760.49 874.75 546.13 666.17 640.21 665.58 785.69 611.45 671.43 722.38 1032.0 True False 888.8421198046096 919.2710386406607 623.5794460952646 829.3816799055079 546.035957081059 736.0112338237531 928.4397028639105 698.1249099870909 519.3521770533866 559.1938562853007 775.7259182489648 1.1458198042563543 1.1850461832134191 0.8038656842907372 1.0691684529216963 0.703903201163651 0.9488032003431583 1.196865646773366 0.8999633679418091 0.6695047372217664 0.7208652478024211 1.0 9.599403194984 -5.754621755806068 24.988817418205073 0.8789582946599629 1.1654331315339146 0.317982900082328 0.15466456421258082 145.85108752717187 534576.8915852528 0.023255832607711305 0.08617458280525875 1.7594553258882666e-06 5.754621755806068 0.2864748368739517 KATSDTLES(ph)PPK ddPTM_A549_MK2206_60min_R1 2 KATSDTLESPPK 12 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 KATSDT(0.001)LES(0.999)PPK;KATSDT(0.001)LES(0.999)PPK 69.594 0.0014799000000000001 13575600.0 3068.3 4250.4 3673.3 3413.4 5218.3 3804.5 3444.0 3896.2 5475.799999999999 5402.4 5499.9 True False 3586.15402726727 4466.727205073751 4194.2291749981405 4249.683153233349 4450.6949826402115 4207.089664777292 4069.730220141921 4448.498281612072 4235.540043055767 4181.994087870251 4134.1230404820535 0.8674521759877547 1.0804533782218815 1.0145390289373386 1.0279527511928674 1.0765753556578337 1.0176498434083205 0.9844240677624767 1.0760439972520415 1.0245316846113723 1.011579492656468 1.0 12.013365611802739 -5.247938893186273 24.94608439681241 1.022994853282735 0.8674520704426869 0.6781465850993413 0.03199482685920976 1012.258020194746 1870410.435447908 0.0043211032800757245 0.11678458464234433 5.6501646909254345e-06 5.247938893186273 -0.1555427828400482 KATSDTLES(ph)PPK ddPTM_A549_PD325901_60min_R1 2 KATSDTLESPPK 12 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 KAT(0.001)S(0.001)DT(0.01)LES(0.987)PPK;KATSDT(0.002)LES(0.998)PPK 65.704 0.0029798999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KATVNLLGEEKKS(ph)T ddPTM_A549_PD325901_60min_R1 1 KATVNLLGEEKKST 14 3 Q00765 Q00765 REEP5 Receptor expression-enhancing protein 5 1 KATVNLLGEEKKS(0.832)T(0.168) 46.159 0.010945 13615000.0 3572.2 3032.8 3453.4 2696.5 3499.2 3429.8 3697.2 3848.5 4723.7 3248.8 3683.8 True False 3934.847114285351 3288.384699612526 3687.7684909811996 2863.056680804172 3253.4282635846594 3401.8688459465666 3837.8989691854695 3771.7386484101553 4525.179316109236 3043.6702135563237 3230.715953532211 1.217948953383939 1.017850144336355 1.1414709754812344 0.8861988246518332 1.0070301166611741 1.052976768888404 1.1879406993330417 1.167462167104611 1.4006738386151716 0.9421039352681605 1.0 11.657638198235178 -7.758254268546266 5.888037543984206 1.1921949396054243 1.0459484585209293 0.02737546071897423 0.13820118689873298 0.23138876469722436 28.32641628803761 0.024617247593741006 0.03550873907412211 1.7448003169168242e-08 7.758254268546266 -0.146246481084495 KATVS(ph)PGPHAGEAEPPSR ddPTM_A549_MK2206_60min_R1 1 KATVSPGPHAGEAEPPSR 18 1 O15055 O15055 PER2 Period circadian protein homolog 2 1 KAT(0.171)VS(0.829)PGPHAGEAEPPSR 50.028999999999996 0.0040152 4841000.0 1338.3 1234.4 996.07 997.88 1162.7 871.79 810.92 1122.1 1344.2 1487.7 2480.0 True False 1564.1723217064116 1297.2256874513073 1137.3277037923385 1242.3606447965358 991.668370219377 964.0422391526337 958.2536672814999 1281.1611112871274 1039.7408462463138 1151.6275367474775 1864.14755548201 0.8390818189829216 0.6958814411640744 0.610106051126549 0.6664497352385286 0.5319688172232497 0.5171491045961556 0.5140438933943325 0.6872637884911741 0.5577567307849026 0.617777028090302 1.0 10.864300344834984 -10.757692357653298 0.8802546489022843 1.0135216315244966 0.6167481546741391 0.0 0.14457108055146886 0.29731764423448603 0.38616752744980065 0.07933944322387929 0.017653799814648395 1.747059283763488e-11 10.757692357653298 -0.39677347685035746 KATVS(ph)PGPHAGEAEPPSR ddPTM_A549_PD325901_60min_R1 2 KATVSPGPHAGEAEPPSR 18 1 O15055 O15055 PER2 Period circadian protein homolog 2 1 KAT(0.259)VS(0.741)PGPHAGEAEPPSR;KAT(0.043)VS(0.957)PGPHAGEAEPPSR 86.85600000000001 1.7521000000000001e-06 11193600.0 3238.3 3183.5 2679.0 3243.5 3148.9 2941.2 3122.9 3818.9 3499.6000000000004 3284.9 3491.0 True False 3567.0498320895404 3451.784717494223 2860.8130501357014 3443.843628477038 2927.7321271152646 2917.2478423517523 3241.7436684164527 3742.7290436309063 3352.5239821868236 3077.4908533954576 3061.629131272312 1.1650822745494298 1.127433980241681 0.9344087502024917 1.1248402340115866 0.9562660928492654 0.9528416791420588 1.058829639195813 1.2224632322059046 1.095013092194359 1.00518081107902 1.0 11.580083818029028 -5.541371651548564 24.947050119185427 1.0457462526959949 1.1556702793193834 0.20720894967785797 0.08143262904362436 239.1392998280184 322600.31374377693 0.01133267594876117 0.04390493897635351 2.8749371075313093e-06 5.541371651548564 0.10992402662338852 KAVAEEDNGS(ph)IGEETDSSPGR ddPTM_A549_PD325901_60min_R1 2 KAVAEEDNGSIGEETDSSPGR 21 1 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 KAVAEEDNGS(1)IGEETDSSPGR;KAVAEEDNGS(1)IGEETDSSPGR 193.5 7.648099999999998e-46 56973000.0 7035.1 6964.200000000001 6607.9 8428.0 8127.299999999999 8929.9 8574.9 7775.200000000001 7661.4 8281.7 9015.1 True False 7749.298173033108 7551.097574862028 7056.351830530687 8948.578418623232 7556.466485662893 8857.177855098906 8901.222511865322 7620.117536473599 7339.418001236179 7758.7920486362345 7906.299851427392 0.9801422054128216 0.9550735131173609 0.8924973708474696 1.1318288689756268 0.9557525805574727 1.120268396283989 1.1258392268360917 0.9638032555896389 0.9282999809210539 0.9813430042417975 1.0 12.948786955979998 -4.2517181185508095 16.153211212339137 0.9886776341274104 1.0061575855373346 0.0 0.08124300719902093 0.0 0.0 0.01089296142611579 0.0 5.601210334688203e-05 4.2517181185508095 0.0174799514099242 KAVAEEDNGSIGEETDSS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 KAVAEEDNGSIGEETDSSPGR 21 1 E9PNJ4;G0XQ39;Q13586 E9PNJ4 STIM1 Stromal interaction molecule 1 1 KAVAEEDNGSIGEETDS(0.11)S(0.89)PGR 184.46 9.1507e-45 16867000.0 1264.2 697.61 979.36 936.12 1354.1 1064.3 1234.4 1088.7 1583.8 1761.4 1992.3 True False 1477.5660532774764 733.1153692667749 1118.2479745259523 1165.469442024023 1154.9136837654235 1176.9235195748374 1458.6745016675925 1243.026559003917 1225.0718288088904 1363.4985166545714 1497.5569253172614 0.986651010254218 0.4895409028351042 0.7467148364253656 0.7782471719912184 0.7711985195626216 0.7858956809441504 0.9740360963965149 0.8300362663947339 0.8180469190173559 0.9104819280013083 1.0 10.548395128619056 -14.999999999977218 0.09687082944946564 1.7073104305441178 0.6258217674958653 0.2278881601693813 0.1218704171170024 91.12296499878804 0.6378831947751769 13.116451563408129 0.8662012139210915 1.000000000052457e-15 14.999999999977218 -1.0814886630482525 KAVLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KAVLSPR 7 1 A8CG34;Q96HA1 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 1 KAVLS(1)PR;KAVLS(1)PR 43.635 0.036483999999999996 7628500.0 2352.9 2680.8 2478.1 1848.36 3445.6000000000004 2537.7 2675.1000000000004 2606.1 4242.0 3794.0 3078.2 True False 2750.011997118 2817.241269377402 2829.5318429104323 2301.208282976034 2938.7568043587207 2806.237729611073 3161.1310429447303 2975.5226558465233 3281.1937730820287 2936.932764952564 2313.7979860019022 1.1885272671837044 1.21758307614634 1.2228949372540883 0.994558858162193 1.2701008567462313 1.2128274579666636 1.366208745132053 1.2859906845143554 1.4180986382271539 1.2693125254324382 1.0 11.176047195211355 -5.25014336135434 17.226349287545165 1.2123257857613212 1.1885262469711677 0.0 0.1245642125169464 288.1948692366174 438694.0051985801 0.022248288519949817 0.3325437275235181 5.6215572598812384e-06 5.25014336135434 -0.023799538790153507 KAVLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KAVLSPR 7 1 A8CG34;Q96HA1 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 1 KAVLS(1)PR;KAVLS(1)PR 55.06399999999999 0.017125 12938500.0 3049.2 3541.1000000000004 3712.7 3825.8999999999996 4409.3 4017.5 3514.2999999999997 3580.7 3450.3 3674.6 4347.1 True False 3358.752539297601 3839.520924491531 3964.6661482787695 4062.2171537506683 4099.605979259215 3984.782811997879 3648.0386095987483 3509.280129495189 3305.295889741453 3442.585128888842 3812.4342585373433 0.8809994642599295 1.00710482177982 1.0399303645434743 1.0655179547434754 1.0753250289047729 1.045206957490372 0.9568790862241212 0.9204827917062993 0.86697780619817 0.9029887193935784 1.0 11.896496744664343 -7.889091286355463 4.838242703913038 0.9343754903029406 1.0238559312816238 0.3804789512823349 0.05711926583215825 0.21607914157676042 8.360622760097192 0.0106937617308977 0.014913744512527787 1.2909478948153253e-08 7.889091286355463 0.08948044097868313 KAVPMAPAPAS(ph)PGSSNDSSAR ddPTM_A549_MK2206_60min_R1 8 KAVPMAPAPASPGSSNDSSAR 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 KAVPMAPAPAS(0.991)PGS(0.007)S(0.002)NDSSAR;KAVPMAPAPAS(0.999)PGS(0.001)SNDSSAR;KAVPMAPAPAS(0.97)PGS(0.011)S(0.011)NDS(0.004)S(0.004)AR;KAVPMAPAPAS(0.855)PGS(0.059)S(0.071)NDS(0.007)S(0.008)AR;KAVPMAPAPAS(0.994)PGS(0.005)S(0.002)NDSSAR;KAVPMAPAPAS(0.993)PGS(0.004)S(0.002)NDSSAR;KAVPMAPAPAS(0.997)PGS(0.002)SNDSSAR;KAVPMAPAPAS(0.997)PGS(0.001)S(0.001)NDSSAR 95.366 5.5653e-07 68016500.0 6431.43 7112.34 6680.540000000001 6183.73 10058.55 7028.06 6882.929999999999 7303.48 11438.720000000001 10730.099999999999 10884.68 True False 7516.898150633102 7474.327726739655 7627.941026527124 7698.744127598186 8578.950619480616 7771.764644351341 8133.469286910989 8338.77065596944 8847.868183882334 8306.162957621897 8181.713554114484 0.9187437449277291 0.9135406265819348 0.9323158255389087 0.94096964855566 1.0485518177504962 0.9498944925104369 0.994103403048224 1.0191961134811391 1.0814199403782412 1.0152106771624665 1.0 12.998187313296926 -6.730971153511531 0.6506280560909902 1.036031502260635 0.9016914874730927 0.5925077590296429 0.03395791463728085 0.5241046884195831 0.3654496655914999 0.0076031455562257265 0.03680861062582635 1.8579278573380218e-07 6.730971153511531 -0.13434001478754232 KAVPMAPAPAS(ph)PGSSNDSSAR ddPTM_A549_PD325901_60min_R1 4 KAVPMAPAPASPGSSNDSSAR 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 KAVPMAPAPAS(1)PGSSNDSSAR;KAVPMAPAPAS(0.99)PGS(0.006)S(0.003)NDS(0.001)S(0.001)AR;KAVPMAPAPAS(0.997)PGS(0.002)S(0.001)NDSSAR;KAVPMAPAPAS(0.997)PGS(0.002)S(0.001)NDSSAR 98.96700000000001 1.4487999999999998e-07 119483000.0 6171.0199999999995 5926.800000000001 6547.1 6772.2 8050.4 6862.299999999999 7391.199999999999 6986.200000000001 7573.7 7335.1 7893.0 True False 6797.497407535184 6426.2722361064125 6991.425576910581 7190.503413217879 7484.967676372293 6806.415703988311 7672.476160619832 6846.854760432127 7255.40372725121 6871.960534184003 6922.211037849435 0.981983555596277 0.9283554345524405 1.0099989062284713 1.0387581906852403 1.0812972380422676 0.9832719151109414 1.1083851848301183 0.9891138428162225 1.04813385312582 0.9927406859758146 1.0 12.75701721036332 -5.911645288806912 5.408174242367019 1.028984021998111 0.9559683457724134 0.3484274083489318 0.03909054270564479 0.1518673756449229 7.179508305462968 0.004935132839546418 0.015921616824355632 1.2256168164317903e-06 5.911645288806912 -0.0730156762256976 KAVPVES(ph)PVQKV ddPTM_A549_MK2206_60min_R1 2 KAVPVESPVQKV 12 2 Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61 Q8TB61-5 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 1 KAVPVES(1)PVQKV;KAVPVES(1)PVQKV 119.54 5.618200000000001e-06 20494500.0 7594.2 8346.2 7785.099999999999 6521.4 9898.2 7463.8 7738.8 7019.5 10828.2 10674.6 12216.4 True False 8875.915299635988 8770.985930497489 8889.144243671368 8119.143292756766 8442.187892066258 8253.614361930539 9144.839787350265 8014.535621317167 8375.629989082227 8263.20044616833 9182.73072451226 0.9665877793783866 0.9551609639477215 0.9680284122829393 0.8841752563955331 0.9193548352159335 0.8988191649678292 0.9958736743678165 0.8727834738661423 0.9121066750573913 0.8998630901928392 1.0 13.164707525107486 -10.799188420058284 1.0636259097051508 0.9997230071884798 0.9289963009957611 0.0 0.04660606018031363 0.46605847009778706 0.9420581018536409 0.024253416712347178 0.006166355650116089 1.5878577019632256e-11 10.799188420058284 -0.0707267061927187 KAVPVES(ph)PVQKV ddPTM_A549_PD325901_60min_R1 4 KAVPVESPVQKV 12 2 Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61 Q8TB61-5 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 1 KAVPVES(1)PVQKV;KAVPVES(1)PVQKV;KAVPVES(1)PVQKV;KAVPVES(1)PVQKV 119.56 5.608500000000001e-06 44567300.0 15011.300000000001 12898.5 13821.3 14291.400000000001 16834.3 16513.3 14155.9 16555.7 16952.9 15875.600000000002 20708.2 True False 16535.23612526501 13985.50186228969 14759.296532228665 15174.14731987567 15651.916843182225 16378.821159767158 14694.610520905711 16225.483575804605 16240.42856829781 14873.211906653158 18161.222680095485 0.9104693233780708 0.7700749067747326 0.8126818767772009 0.8355245451897014 0.861831668433677 0.9018567443544525 0.8091201115556418 0.8934136132578546 0.8942365199947223 0.8189543275053858 1.0 14.148573712967433 -10.14478283422242 0.2964493359197903 1.0472902207771226 0.8221358816468137 0.0 0.06656937923031536 1.0806512626976899 0.16583683730157026 0.0853528680722732 0.022287775070071906 7.165016020326942e-11 10.14478283422242 -0.2251543391303089 KAVS(ph)PLLLTTTNSSEGLSMGNYIGLINR ddPTM_A549_MK2206_60min_R1 2 KAVSPLLLTTTNSSEGLSMGNYIGLINR 28 1 P19525;P19525-2;C9JZT2 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase 1 KAVS(0.713)PLLLT(0.267)T(0.02)T(0.001)NSSEGLSMGNYIGLINR;KAVS(0.646)PLLLT(0.333)T(0.02)TNSSEGLSMGNYIGLINR 164.72 1.1202999999999998e-46 53022000.0 11286.900000000001 15256.9 15984.5 14447.9 22603.0 18352.699999999997 17337.4 15471.1 25546.0 21520.0 21565.0 True False 13191.852781788915 16033.411042511221 18251.342457125138 17987.636148590875 19278.128642013056 20294.77053246369 20487.38116105939 17664.175803256647 19759.871788579334 16658.617053710903 16209.815336278032 0.8138188195312238 0.9891174396433737 1.125943885139648 1.1096755746707385 1.1892873695401114 1.2520050420959092 1.2638873877364933 1.0897209768777387 1.219006594378418 1.0276870345603777 1.0 13.984580035182608 -5.400351522593006 1.8492384943637623 1.133339253509017 0.7599818114543111 0.5978237920362603 0.08165378347949623 0.40825467266693427 1.754520385371529 0.014136510940833619 0.23776939789765228 3.9778506873078245e-06 5.400351522593006 -0.3733574420547059 KAVS(ph)PLLLTTTNSSEGLSMGNYIGLINR ddPTM_A549_PD325901_60min_R1 1 KAVSPLLLTTTNSSEGLSMGNYIGLINR 28 1 P19525;P19525-2;C9JZT2 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase 1 KAVS(0.869)PLLLT(0.098)T(0.033)TNSSEGLSMGNYIGLINR 159.78 3.1526e-46 40211000.0 4680.6 4800.0 5223.6 5622.0 6784.6 5739.2 5777.2 6307.6 6607.2 5315.9 5826.3 True False 5155.771066324397 5204.512845601466 5578.10490805855 5969.2581715116075 6308.073101599361 5692.461858025698 5997.05450740514 6181.789969783526 6329.522361156923 4980.253166782828 5109.702035958716 1.00901599154735 1.0185550564349026 1.0916693123793761 1.168220402971426 1.234528561001659 1.1140496682518672 1.1736603162379766 1.209814178259351 1.238726312535235 0.9746660630571191 1.0 12.31902344984101 -5.882417581569547 3.11840614912338 1.1379295658360429 1.0111475996888932 0.25819271132606014 0.08161050970812841 0.30167622855422704 5.749770136847171 0.013327067948375631 0.05055053589348439 1.310938802761384e-06 5.882417581569547 -0.12678196614714965 KAVS(ph)PSSSEK ddPTM_A549_MK2206_60min_R1 4 KAVSPSSSEK 10 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 KAVS(0.619)PS(0.242)S(0.117)S(0.022)EK;KAVS(0.852)PS(0.126)S(0.019)S(0.003)EK;KAVS(0.967)PS(0.022)S(0.01)S(0.001)EK;KAVS(0.624)PS(0.207)S(0.143)S(0.026)EK 87.001 0.00058984 141526300.0 25032.5 41116.3 23928.5 40328.3 26957.6 20639.4 19689.6 23093.9 38300.5 43378.5 36066.1 True False 29257.374014134188 43208.944048083424 27321.921110157906 50208.735310406184 22992.17275051678 22823.447608675084 23266.945453689437 26367.53104710257 29625.497903330546 33579.26672232332 27109.891996278096 1.0792139643400616 1.5938441973142334 1.0078210976978041 1.8520448298834726 0.8481100829790603 0.8418863347669737 0.8582455974698735 0.972616602483055 1.092792915124775 1.2386352083930618 1.0 14.726531745150586 -6.810046490755457 24.99992946774514 0.9981845118234164 1.3714660376918892 0.3951996613159876 0.23970011856160828 81.74470649542322 42043.20777316475 0.030145439556897462 0.05696962040762324 1.548650828639401e-07 6.810046490755457 0.37328152586847285 KAVS(ph)PSSSEK ddPTM_A549_PD325901_60min_R1 2 KAVSPSSSEK 10 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 KAVS(0.974)PS(0.022)S(0.003)S(0.001)EK;KAVS(0.835)PS(0.091)S(0.062)S(0.011)EK 87.001 0.00058984 118697400.0 11568.2 12995.9 10484.6 14284.4 13488.3 10277.7 10671.96 10627.2 16694.2 11923.9 11690.9 True False 12742.595147941265 14091.110102115013 11196.14800502157 15166.71494577383 12540.928340108874 10194.001818760578 11078.08727772059 10415.232159122881 15992.600829644318 11171.022919054498 10252.993414721132 1.242817061566195 1.3743410857831195 1.0919882176990643 1.4792475067815447 1.2231479952091602 0.9942464026285384 1.0804734607373099 1.0158235490689782 1.5597982152882615 1.089537705448564 1.0 13.323757553094369 -11.26848196086408 1.7917286878752976 0.999423163440318 1.27702661700545 0.08319958695165508 0.1813034848164516 0.4878944044057005 2.8259176568958013 0.15522738552332635 0.031194659733881174 5.389122295146147e-12 11.26848196086408 0.27760345356513205 KAVS(ph)PSSSEKR ddPTM_A549_MK2206_60min_R1 1 KAVSPSSSEKR 11 2 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 KAVS(0.491)PS(0.491)S(0.009)S(0.009)EKR 47.621 0.0065366 31931000.0 1720.4 1967.0 1726.5 1570.7 2436.0 1608.5 1386.4 1358.3 3091.7 2850.3 3151.5 True False 2010.7614602583228 2067.1118982637086 1971.3436611859336 1955.5215705114024 2077.6676269496875 1778.7104023641143 1638.290934147723 1550.8431846192905 2391.434886430388 2206.415250380678 2368.8955730248185 0.8488181088078957 0.8726057500391351 0.832178371910563 0.8254992718038714 0.8770617204948106 0.7508606215566088 0.6915842778395698 0.6546692907357814 1.0095146926957144 0.9314109391336862 1.0 11.209998886954947 -8.789095899161689 24.99145216877673 1.004493108183431 0.7969874111527423 0.5696292287454096 0.071188712092413 98.0284785378422 88581.7066925996 0.012755635225596449 0.013580883932941075 1.625189848236441e-09 8.789095899161689 -0.20750569703068866 KAVS(ph)PSSSEKR ddPTM_A549_PD325901_60min_R1 2 KAVSPSSSEKR 11 2 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 KAVS(0.716)PS(0.217)S(0.056)S(0.011)EKR;KAVS(0.445)PS(0.445)S(0.094)S(0.016)EKR 75.589 0.00026829 86403000.0 5193.2 5477.299999999999 5740.200000000001 5903.7 6882.1 7132.5 6696.9 6330.6 6993.700000000001 6362.7 7241.8 True False 5720.409840968219 5938.8912935860235 6129.764490626714 6268.358140724489 6398.7250379561 7074.415284772836 6951.754194184297 6204.331216740373 6699.779110246877 5960.958036134824 6351.104509552515 0.9006952778629786 0.9350958222547757 0.9651493659736051 0.9869713419605095 1.007497991622081 1.1138873992913216 1.094574051447014 0.9768901153190938 1.054899836740197 0.9385702954768131 1.0 12.632791794954317 -6.15002476662919 1.2677924063415908 1.0333872656374683 0.9095941632503239 0.43635479690397083 0.047853500759019146 0.31382511220389525 0.8748053175752695 0.006325296976888475 0.032722747921629165 7.079054133190509e-07 6.15002476662919 -0.12379310238714436 KAVSPLLLT(ph)TTNSSEGLSMGNYIGLINR ddPTM_A549_PD325901_60min_R1 1 KAVSPLLLTTTNSSEGLSMGNYIGLINR 28 1 P19525;P19525-2;C9JZT2 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase 1 KAVS(0.423)PLLLT(0.45)T(0.125)T(0.002)NSSEGLSMGNYIGLINR 208.24 4.9592e-90 47578000.0 8685.6 8761.4 10578.0 9285.9 13047.0 13602.0 11030.0 12786.0 12890.0 11991.0 11527.0 True False 9567.355717999222 9499.75392613597 11295.886690681393 9859.468953190968 12130.623729706525 13491.22982172873 11449.752685847589 12530.97319957704 12348.27812618246 11233.88621360314 10109.252075673436 0.9463959990691878 0.9397088780678304 1.117381049174096 0.9752916318029563 1.1999526412935384 1.3345428248043762 1.1326013635964116 1.2395549251097568 1.2214828588454076 1.1112480062334174 1.0 13.303388644185892 -5.931186417817325 1.254977338299988 1.1382460704682138 0.9240159781507952 0.3950269827259336 0.09790746488788832 0.6384889629384111 1.6026568815071793 0.01782620995204702 0.12841733385774837 1.171692316997742e-06 5.931186417817325 -0.21423009231741863 KAVSPS(ph)SSEK ddPTM_A549_PD325901_60min_R1 2 KAVSPSSSEK 10 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 KAVS(0.259)PS(0.477)S(0.259)S(0.006)EK;KAVS(0.336)PS(0.568)S(0.084)S(0.013)EK 80.979 0.00092485 139407000.0 14035.8 18633.4 14397.1 21129.2 17942.9 14614.9 13575.4 14989.4 22966.3 17631.4 17611.0 True False 15460.704083390156 20203.702011922986 15374.173782795344 22434.302696105144 16682.65260364461 14495.88109995465 14092.019275743922 14690.424658043186 22001.106278459603 16518.150395006443 15444.95864532705 1.001019454854149 1.3081098160166145 0.9954169600477939 1.452532390100815 1.080135789725279 0.9385509817690869 0.9124025255974081 0.9511469078933306 1.4244846349987572 1.0694849221887748 1.0 13.91484838762983 -13.478974885735667 6.992815528419366 0.712136333106774 1.1499569835756096 0.0 0.19364507029824396 0.0 0.0 0.0 0.028388286008815284 3.3191365081086005e-14 13.478974885735667 0.43782065046883556 KAVVLPGGTAT(ph)SPK ddPTM_A549_MK2206_60min_R1 2 KAVVLPGGTATSPK 14 1 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 KAVVLPGGT(0.002)AT(0.613)S(0.385)PK;KAVVLPGGTAT(0.59)S(0.41)PK 134.08 3.8313e-09 48618000.0 5835.5 6897.5 7300.5 7147.299999999999 8403.6 7321.9 6987.7 6432.5 9636.5 9188.400000000001 8899.8 True False 6820.389735722761 7248.553288395489 8335.820676795782 8898.38882085449 7167.441572181602 8096.698598116135 8257.274639746138 7344.32657370506 7453.848136328372 7112.734058379056 6689.734038015638 1.0195307761062917 1.0835338516007151 1.2460615966832096 1.3301558433097291 1.0714090472732254 1.2103169650848842 1.234320317193877 1.0978503079449167 1.114221894916975 1.0632312163622115 1.0 12.707733139824313 -9.711877111316824 0.629993438400656 1.0072632781475677 1.1711565179735792 0.24005831479482465 0.08762999720846791 0.6070622394648993 0.5137881005946027 0.04371870969316482 0.02141034647683416 1.9414351515711945e-10 9.711877111316824 0.16389323982601156 KAVVLPGGTATS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KAVVLPGGTATSPK 14 1 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 KAVVLPGGT(0.002)AT(0.416)S(0.582)PK;KAVVLPGGT(0.002)AT(0.202)S(0.796)PK 149.95 8.619199999999999e-14 98174000.0 8723.5 8738.5 9143.7 9451.5 11157.6 10735.4 10352.6 10459.0 10589.3 9666.1 10561.4 True False 9609.103298098718 9474.92406276842 9764.246467534835 10035.297689086081 10373.928667630373 10647.97446171053 10746.573858160096 10250.387040073227 10144.268546282692 9055.78079637305 9262.414754230711 1.0374296069725937 1.0229431864342549 1.0541793610650945 1.0834429201631623 1.1200026065440403 1.149589469295461 1.1602345763291888 1.106664656254056 1.0952077633588135 0.9776911352665051 1.0 13.177172644432565 -4.311541520394552 16.218171689081824 1.0678582591715597 1.0805419896707473 0.0 0.057441237636246895 0.0 0.0 0.008267441262816623 0.0 4.880434399941798e-05 4.311541520394552 0.012683730499187584 KAVVQS(ph)PQVTEVL ddPTM_A549_MK2206_60min_R1 2 KAVVQSPQVTEVL 13 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 KAVVQS(0.653)PQVT(0.347)EVL;KAVVQS(1)PQVTEVL 78.763 0.00065412 2935200.0 3748.5 3814.2 4179.1 3683.4 6130.200000000001 4995.2 4064.3 4850.7 7887.7 6415.3 5974.5 True False 4381.155157973914 4008.32648823459 4771.759220655742 4585.833165354107 5228.455700626839 5523.788748454598 4802.730700848669 5538.30157964573 6101.148544068623 4966.079274380649 4490.86676218841 0.9755700602969943 0.8925507481057673 1.0625474932439218 1.0211465643927098 1.1642419999294302 1.2300050393307245 1.0694440416905815 1.2332366718773244 1.3585681489012869 1.105817548673091 1.0 12.132778204646087 -6.410692577080768 1.2823496919343325 1.1756887383147594 0.9406173521516747 0.44824565049212384 0.09573690374832394 0.44743087900296374 1.369779769721029 0.020526168911211312 0.07830042661749767 3.8842522226251475e-07 6.410692577080768 -0.23507138616308465 KAWENS(ph)PNVR ddPTM_A549_MK2206_60min_R1 2 KAWENSPNVR 10 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 KAWENS(1)PNVR;KAWENS(1)PNVR 74.475 0.00067442 17021200.0 4890.5 4545.3 4635.3 4268.7 7048.8 5693.3 5105.1 5166.8 8014.5 7879.7 7516.8 True False 5715.896838754546 4776.636355454009 5292.655240483728 5314.531691629223 6011.930857488899 6295.761227093319 6032.630588515249 5899.209722661375 6199.228546526621 6099.670297310674 5650.17110687386 1.0116325206153005 0.8453967614614132 0.9367247717586489 0.9405965927587032 1.0640263354458295 1.1142602777877026 1.0676898937053603 1.0440762962885393 1.0971753650052813 1.0795549695636588 1.0 12.46407884268558 -6.723727452581296 5.565785769351529 1.054784484749769 0.9259730583735154 0.6529390670854451 0.046095145477825096 0.10217959513093178 7.887393819682219 0.007296611447272536 0.015129235963106663 1.8891765556457186e-07 6.723727452581296 -0.12881142637625353 KAWENS(ph)PNVR ddPTM_A549_PD325901_60min_R1 2 KAWENSPNVR 10 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 KAWENS(1)PNVR;KAWENS(1)PNVR 63.76 0.0026698 29204000.0 7179.5 6481.9 6583.8 6535.799999999999 6844.5 6672.4 6230.200000000001 6519.4 8276.8 7103.5 8106.9 True False 7908.357554731444 7028.152461230032 7030.616259605612 6939.501522121236 6363.765932243145 6618.062186627169 6467.293670296253 6389.365452629643 7928.954879347323 6654.983797709103 7109.802693873252 1.11231744328803 0.9885158229899149 0.9888623583976701 0.9760469904602599 0.8950692735435554 0.9308362653059512 0.9096305409247616 0.8986698685936203 1.1152144751049085 0.9360293223669791 1.0 12.795593808427974 -8.761494133927291 24.999999998961005 1.054406833789313 0.9596268999915861 0.037972897120698845 0.07208342373435134 1.4412642543559953 657897.5615297044 0.012178109364199403 0.013376311021348798 1.7318324226805313e-09 8.761494133927291 -0.09477993379772698 KAYGQALAK ddPTM_A549_MK2206_60min_R1 2 KAYGQALAK 9 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 111.46 0.00032283 19284900.0 10280.6 11100.2 11530.3 11274.7 15195.5 11171.9 11080.2 11235.4 17808.3 16834.800000000003 15517.099999999999 False True 12015.71394346181 11665.152767212412 13165.469919821708 14037.002006140508 12960.262079357126 12354.103042692965 13093.328915568094 12828.052356969421 13774.748484011472 13031.806987723614 11663.775819826562 1.0301736015053555 1.0001180533137057 1.1287485393402799 1.2034698045447547 1.1111549364080493 1.0591855702244342 1.1225634921164653 1.099819865807415 1.1809853598691937 1.117288877035138 1.0 13.509747275697599 -5.75597757935672 24.87747262604573 1.1004792801969556 1.0151457996827682 0.31580074764554167 0.05310798587695423 164.63051960510066 749835.1140866195 0.009923322629982237 0.03631258518038088 1.7539710490298587e-06 5.75597757935672 -0.08533348051418743 KAYGQALAK ddPTM_A549_PD325901_60min_R1 2 KAYGQALAK 9 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 126.07 6.6634e-05 43741000.0 16794.9 16709.5 16674.3 18568.7 20743.5 21648.0 18986.300000000003 18904.4 21536.0 19959.9 19754.5 False True 18499.90588424809 18117.668206995346 17805.918268711368 19715.64642642255 19286.548121190095 21471.705865371514 19708.834036202014 18527.3369117851 20630.916813457363 18699.62850762217 17324.821734093064 1.06782662287616 1.0457636150646248 1.02776920547884 1.1379999591929217 1.113232125398243 1.2393608543237074 1.1376067435901815 1.0694099596606894 1.1908299623573222 1.079354742844116 1.0 14.080552887198342 -6.255572237423878 24.389590198724573 1.1087031772696068 1.046984194437474 0.20868909070833053 0.06072085875653567 634.7225934899279 2638512.0476362472 0.011278885601251065 0.028968770373286865 5.551722660732362e-07 6.255572237423878 -0.06171898283213273 KAYS(ph)FCGTVEYMAPEVVNR ddPTM_A549_MK2206_60min_R1 6 KAYSFCGTVEYMAPEVVNR 19 1 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 KAYS(0.998)FCGT(0.002)VEYMAPEVVNR;KAYS(0.939)FCGT(0.027)VEY(0.034)MAPEVVNR;KAY(0.005)S(0.529)FCGT(0.465)VEY(0.001)MAPEVVNR;KAYS(0.452)FCGT(0.285)VEY(0.264)MAPEVVNR;KAYS(0.986)FCGT(0.014)VEYMAPEVVNR;KAYS(0.999)FCGT(0.001)VEYMAPEVVNR 143.36 5.5702e-21 111331600.0 10988.599999999999 12869.7 13162.2 12429.599999999999 15465.1 13946.6 12779.3 12181.6 19479.600000000002 17107.5 18153.0 True False 12843.207034523715 13524.712759066822 15028.797878518106 15474.852557985938 13190.204276494094 15422.419954996169 15101.133392061449 13908.379104585403 15067.501702529162 13242.903868325242 13645.109102687467 0.9412315385586904 0.9911765935534417 1.1014054754284166 1.1340951868928695 0.9666616937416955 1.1302525937266894 1.106706679911208 1.019294092844306 1.1042419367362586 0.9705238535408259 1.0 13.73609630961602 -5.566122966461119 5.011687596578264 1.0600489643089699 0.9514877792918759 0.2839206351068877 0.05910325702348628 0.15396591748194488 8.747612200736826 0.007777335355497976 0.033956169684454085 2.7156702430898908e-06 5.566122966461119 -0.108561185017094 KAYS(ph)FCGTVEYMAPEVVNR ddPTM_A549_PD325901_60min_R1 4 KAYSFCGTVEYMAPEVVNR 19 1 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 KAYS(0.932)FCGT(0.068)VEYMAPEVVNR;KAYS(0.983)FCGT(0.017)VEYMAPEVVNR;KAYS(0.908)FCGT(0.092)VEYMAPEVVNR;KAYS(0.614)FCGT(0.386)VEYMAPEVVNR 172.77 1.4738999999999998e-34 60820900.0 11671.9 12578.7 14308.5 13696.1 15430.5 15008.400000000001 13679.7 16044.599999999999 12770.300000000001 16070.199999999999 17419.0 True False 12856.82269560135 13638.751193951486 15279.560854000258 14542.076990900054 14346.71491233514 14886.176566419163 14200.288469319075 15724.577866254784 12233.6087009145 15055.524829442513 15276.573428138767 0.8416038292932665 0.8927886386373475 1.0001955560175548 0.9519200794148115 0.9391317352560968 0.9744447363437857 0.9295467033963767 1.0293262386505349 0.8008084246419251 0.9855302237942252 1.0 13.899033359270675 -5.521921579046547 24.95546084303312 0.9291225883754213 0.8544000017012833 0.14794338410661567 0.06223125442617106 52.27480332439951 1362837.592638202 0.01090294453709667 0.04333811249270467 3.006619161597774e-06 5.521921579046547 -0.074722586674138 KAYS(ph)FCGTVEYMAPEVVNRR ddPTM_A549_MK2206_60min_R1 1 KAYSFCGTVEYMAPEVVNRR 20 2 B4DG22;B1AXG1;B7ZB17;P51812;Q9UK32-2;Q9UK32 B4DG22;Q9UK32-2 RPS6KA3;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6 1 KAYS(1)FCGTVEYMAPEVVNRR 72.532 0.00011365 3286300.0 1242.5 1330.2 1684.2 1450.9 2326.7 1656.5 1905.4 1460.5 2788.3 1842.8 2379.0 True False 1452.20362379154 1397.9014982564238 1923.0448851256003 1806.3705651333769 1984.4455121608528 1831.7897305042923 2251.5865161029083 1667.5303475936644 2156.754502000145 1426.5102001198159 1788.228642940202 0.8120905732746958 0.7817241401289697 1.07539094215812 1.0101451915921367 1.1097269468282487 1.0243599093080553 1.259115563880497 0.9325039916886211 1.2060843061175965 0.7977224868595946 1.0 10.80431549598588 -5.770616281608437 9.364581207460052 1.0880630936851408 0.7965569888052243 0.3345504865806225 0.12455559744241261 0.06910695002186866 56.00905129048824 0.013105227543958948 0.04355014809875156 1.695835484403216e-06 5.770616281608437 -0.29150610487991646 KAYSFCGT(ph)VEYMAPEVVNR ddPTM_A549_MK2206_60min_R1 1 KAYSFCGTVEYMAPEVVNR 19 1 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 KAYS(0.418)FCGT(0.582)VEYMAPEVVNR 162.11 5.5674999999999994e-27 44032000.0 3603.4 4289.4 4141.3 3214.1 5507.5 4159.1 3832.6 3843.9 6441.1 5068.4 5233.6 True False 4211.56582532832 4507.712138491282 4728.5986122613995 4001.5546442864324 4697.354045741136 4599.213201412861 4528.933810022046 4388.784596450043 4982.201134323114 3923.444919843325 3933.9526799881633 1.0705685014342856 1.1458480833848883 1.2019968202250026 1.0171842342288857 1.194054536963894 1.1691074030475372 1.1512425741825834 1.1156170278243531 1.2664618869635476 0.9973289561416713 1.0 11.941763888756162 -3.9059135732637458 16.631491628452093 1.13217973873253 0.45028839043242175 0.0 0.08612830254778567 0.0 0.0 0.012863677298942616 0.0 0.00012418994270919478 3.9059135732637458 -0.6818913483001083 KAYSFCGT(ph)VEYMAPEVVNR ddPTM_A549_PD325901_60min_R1 4 KAYSFCGTVEYMAPEVVNR 19 1 B4DG22;B1AXG1;B7ZB17;P51812;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q9UK32-2;Q9UK32 B4DG22;E9PGT3;Q9UK32-2 RPS6KA3;RPS6KA1;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1;Ribosomal protein S6 kinase alpha-6 1 KAYS(0.202)FCGT(0.797)VEY(0.001)MAPEVVNR;KAYS(0.046)FCGT(0.953)VEY(0.001)MAPEVVNR;KAYS(0.363)FCGT(0.637)VEYMAPEVVNR;KAYS(0.439)FCGT(0.561)VEYMAPEVVNR 196.1 1.2386e-54 99397000.0 17097.4 18943.300000000003 21877.9 18238.0 19378.0 19516.3 19271.8 22055.3 19494.800000000003 21843.0 24704.0 True False 18833.115461559366 20539.718372517127 23362.66585650015 19364.519838496737 18016.956130470822 19357.36572340865 20005.198894933605 21615.38973945186 18675.50135099316 20463.829252250292 21665.56461155863 0.8692649279729295 0.9480352227497056 1.0783317340382679 0.8937925314056075 0.8315941196777642 0.8934623246828032 0.9233638381277534 0.9976841188768281 0.8619900605327282 0.9445324698038466 1.0 14.403116213744354 -7.166861629089492 0.005428916487079056 1.8450400288089024 3.444011422994132e-07 0.03035660519759864 0.06815417942625726 27434.919678323095 47.3614719395521 7902.213815276594 8193.501327524009 6.809862937179827e-08 7.166861629089492 -1.8450396844077601 KCEDPDS(ph)PVTKK ddPTM_A549_MK2206_60min_R1 3 KCEDPDSPVTKK 12 2 Q9BUB4-2;Q9BUB4 Q9BUB4-2 ADAT1 tRNA-specific adenosine deaminase 1 1 KCEDPDS(0.95)PVT(0.05)KK;KCEDPDS(0.913)PVT(0.087)KK;KCEDPDS(0.973)PVT(0.027)KK 64.52 0.0013160000000000001 15146500.0 3263.45 3440.98 2908.19 2552.6600000000003 3328.85 2860.1000000000004 2527.09 2510.37 4048.78 4047.6099999999997 4346.67 True False 3814.240576307846 3616.111184386098 3320.6150721252966 3178.061814593263 2839.1805747009316 3162.7538836192753 2986.2295418172034 2866.222635185692 3131.7377945730905 3133.2520898127677 3267.271877010879 1.16740838224867 1.1067677623737762 1.0163265247345192 0.972695855816189 0.8689759167818032 0.9680106225236377 0.9139825684017481 0.8772525651608479 0.9585176601336941 0.9589811340338406 1.0 11.673870794318832 -5.751027810829158 1.826559239498849 0.9587185898092657 1.1681850503518347 0.7684297435959937 0.04133930763201967 0.17978982695111484 1.0549693273372542 0.006907663968287588 0.04650533151304791 1.7740758711097167e-06 5.751027810829158 0.209466460542569 KCEDPDS(ph)PVTKK ddPTM_A549_PD325901_60min_R1 4 KCEDPDSPVTKK 12 2 Q9BUB4-2;Q9BUB4 Q9BUB4-2 ADAT1 tRNA-specific adenosine deaminase 1 1 KCEDPDS(0.981)PVT(0.019)KK;KCEDPDS(0.685)PVT(0.315)KK;KCEDPDS(0.994)PVT(0.006)KK;KCEDPDS(0.684)PVT(0.316)KK 78.069 0.00028284 64487400.0 15038.14 14945.39 16757.36 15187.050000000001 16825.3 15105.849999999999 15690.9 16898.6 14274.57 17639.68 20167.7 True False 16564.80090230644 16204.890466150757 17894.615219791707 16125.119586206927 15643.548972133915 14982.832965928608 16288.025785889948 16561.544166304746 13674.65946405433 16525.907594393386 17687.200753583686 0.9365416909710922 0.9161930534919387 1.011726811330843 0.9116829627740693 0.8844558949761625 0.8471002944257795 0.9208933631055075 0.9363575614388351 0.7731387037761555 0.9343427388330511 1.0 14.110418119014936 -6.508271345509144 22.276567052493377 0.8922853239848325 0.9527489671089024 0.1394299556012929 0.05839392899745709 305.0878355092184 465260.6312725439 0.011651251605366479 0.026140063201909494 3.102620477167296e-07 6.508271345509144 0.06046364312406993 KCELS(ph)KNSDIEQSSDSK ddPTM_A549_MK2206_60min_R1 1 KCELSKNSDIEQSSDSK 17 2 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 KCELS(0.5)KNS(0.5)DIEQSSDSK 65.25 0.00051145 2945200.0 817.23 651.1 749.77 731.33 1149.3 815.87 737.63 460.69 1173.8 1236.8 996.74 True False 955.1584446447973 684.2382089270467 856.0986602069953 910.5058828306509 980.2394924685038 902.2048218693254 871.647822962626 525.9942183039541 907.9361741734282 957.4060210050945 749.2219493754584 1.2748671410935102 0.9132650338092987 1.1426502666140894 1.2152685643948855 1.3083432663520052 1.2041889891525355 1.1634040135759773 0.7020539357428276 1.2118387280701959 1.2778670216524965 1.0 9.54924935549459 -8.04254367325026 24.997592429028614 1.0663028109625137 1.1717866880900183 0.11531713239748365 0.16594349055149848 947.7582943152015 556876.8303001343 0.026048754159540166 0.03363032580343012 9.066847825308538e-09 8.04254367325026 0.10548387712750462 KCELSKNS(ph)DIEQSSDSK ddPTM_A549_MK2206_60min_R1 1 KCELSKNSDIEQSSDSK 17 2 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 KCELS(0.449)KNS(0.551)DIEQSSDSK 74.207 0.00010862 2247700.0 686.87 807.36 694.97 584.59 740.14 619.35 1017.5 689.54 1251.5 923.98 915.81 True False 802.7968636408012 848.4511754866235 793.5271961855715 727.8145762432426 631.2663864575294 684.8892059087434 1202.3665792666682 787.2844066276858 968.0372482348321 715.2522762680201 688.3891019298303 1.1661963581210686 1.2325168616238622 1.1527306198790728 1.0572720779612677 0.9170197271976517 0.9949158172154741 1.746638021862858 1.143661926693221 1.4062355803150224 1.039023241743487 1.0 9.427080447646388 KCELSKNS(ph)DIEQSSDSK ddPTM_A549_PD325901_60min_R1 1 KCELSKNSDIEQSSDSK 17 2 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 KCELS(0.033)KNS(0.967)DIEQSSDSK 139.0 1.4769e-13 16754000.0 1562.1 1968.8 1916.0 1845.9 2104.4 2219.4 1906.3 2125.8 2097.4 1657.2 1989.7 True False 1720.6832420427595 2134.7176855042003 2046.031281843973 1959.9170506569342 1956.594203785881 2201.325942239726 1978.8452896673864 2083.3992513421617 2009.2535719049727 1552.5641091804782 1744.9795137475005 0.9860764716643793 1.223348279269882 1.1725245286404176 1.1231748196560978 1.1212705870591677 1.261519648166058 1.1340220753753367 1.1939390892147923 1.1514482296642667 0.8897319979683929 1.0 10.768994383797084 -10.480812526832771 0.7780556558418532 0.9983064262924298 1.1568242532902873 0.4917283369700872 0.07603843363878147 0.47324083274301887 0.5095577102023654 0.04371858840624138 0.0121757122528114 3.305121834065474e-11 10.480812526832771 0.15851782699785744 KCS(ph)LPAEEDSVLEK ddPTM_A549_MK2206_60min_R1 5 KCSLPAEEDSVLEK 14 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KCS(0.982)LPAEEDS(0.018)VLEK;KCS(0.963)LPAEEDS(0.037)VLEK;KCS(0.959)LPAEEDS(0.041)VLEK;KCS(0.999)LPAEEDS(0.001)VLEK;KCS(1)LPAEEDSVLEK 189.11 1.0396e-26 385601800.0 36782.4 41386.200000000004 38622.8 34523.8 50907.0 41526.700000000004 38134.1 38617.299999999996 56002.2 55254.4 55975.9 True False 42990.369876659934 43492.58080524732 44100.09380669104 42982.13254983229 43418.64773609513 45921.027830807514 45062.5723542143 44091.42053552124 43317.79111713681 42772.39266415258 42075.53917375218 1.0217425782502736 1.0336785139138307 1.0481171405689753 1.0215468035320072 1.0319213630702757 1.0913948753259055 1.0709921545657937 1.047911004858296 1.0295243261947213 1.0165619622251951 1.0 15.360694138527478 -9.61132055530636 1.004812615674137 1.0054707488111903 1.0459017845999758 0.3217134936585133 0.020332186568065222 0.3548384369923549 0.7467006893519205 0.006507674259216649 0.004414356261167297 2.4472562408512293e-10 9.61132055530636 0.040431035788785596 KCS(ph)LPAEEDSVLEK ddPTM_A549_PD325901_60min_R1 3 KCSLPAEEDSVLEK 14 1 E7EVA0;P27816;P27816-6 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KCS(0.999)LPAEEDS(0.001)VLEK;KCS(1)LPAEEDSVLEK;KCS(0.929)LPAEEDS(0.071)VLEK 185.09 1.8394e-26 374454000.0 12868.899999999998 13102.800000000001 16392.8 13463.7 13858.5 15415.6 16151.300000000001 16384.4 11903.6 14453.9 15328.9 True False 14175.341254416533 14207.018940280608 17505.313985914338 14295.322170718753 12885.126769229535 15290.060464625898 16765.946559830478 16057.600288686855 11403.333087884064 13541.278287281988 13443.542477903218 1.0544349659114145 1.0567913155057378 1.3021355059269044 1.0633597650482067 0.9584621605806999 1.1373535278932432 1.2471375448389592 1.1944470971903642 0.8482387069202488 1.0072700933953544 1.0 13.714625729116099 -8.759237366668716 24.999994301780536 0.9283349425052021 1.126920187121847 0.3714010263435912 0.1000879922406491 41.233617993281534 468134.23622469034 0.018373197597372132 0.020340854313493084 1.740855136847057e-09 8.759237366668716 0.19858524461664495 KCS(ph)PSSSSINNSSSKPTK ddPTM_A549_PD325901_60min_R1 1 KCSPSSSSINNSSSKPTK 18 2 A0A2R8YDD6;O15265-3;O15265;O15265-2 A0A2R8YDD6 ATXN7 Ataxin-7 1 KCS(0.992)PS(0.006)S(0.002)SSINNSSSKPTK 55.864 0.0019442 3561900.0 1090.1 979.75 1208.5 980.07 1075.2 1170.4 1010.2 1207.7 888.05 915.02 1025.0 True False 1200.7661495107939 1062.3169709329236 1290.5160773008563 1040.606697999534 999.6816612386335 1160.868650444884 1048.643713802651 1183.611476077678 850.7283467770621 857.2454810417098 898.9314980103472 1.3357704699062312 1.1817551985709769 1.4356111451842815 1.157604000196638 1.1120776871778126 1.2913872225128347 1.166544632292527 1.316687065363076 0.9463772808718176 0.9536271483857187 1.0 9.812067370869084 -8.767129675653988 24.99823069237166 0.9746781420156465 1.2445764101776426 0.661440904241313 0.09007205855558151 57.30569428495608 251751.00041329762 0.014847614294498166 0.016019847737543693 1.7095047991589035e-09 8.767129675653988 0.26989826816199614 KCSPGS(ph)PTDPNATLSKDEAAVHQDGKPR ddPTM_A549_PD325901_60min_R1 1 KCSPGSPTDPNATLSKDEAAVHQDGKPR 28 3 Q9P0K8-2;Q9P0K8 Q9P0K8-2 FOXJ2 Forkhead box protein J2 1 KCS(0.052)PGS(0.753)PT(0.195)DPNATLSKDEAAVHQDGKPR 74.605 2.0091999999999998e-06 12347000.0 1138.3 1153.3 970.6 1244.5 1530.2 1231.0 1369.7 1336.4 1509.4 1411.2 1544.4 True False 1253.859378027829 1250.4926385067017 1036.4707526919422 1321.3699385354314 1422.724030903419 1220.9751441367493 1421.8246830285987 1309.7444536144815 1445.9651670798914 1322.096591163101 1354.448590758224 0.9257341966193896 0.9232485064690956 0.7652344723631946 0.9755777720553608 1.0504082920614757 0.9014555092513655 1.0497442964835286 0.9669945855097261 1.067567404880562 0.9761142653801188 1.0 10.40348992053077 -6.506519793499394 21.698220061544294 1.0197444990406668 0.8755592543004013 0.45491522260287365 0.06042193649569136 71.96643406893926 95453.80099355636 0.008209988761896134 0.018557683053594128 3.115158915580703e-07 6.506519793499394 -0.1441852447402655 KCTS(ph)PRS(ph)SDTEENVK ddPTM_A549_PD325901_60min_R1 2 KCTSPRSSDTEENVK 15 2 H0YBT0;A0A087WUS5;P01106;P01106-2;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 2 KCT(0.477)S(0.535)PRS(0.345)S(0.309)DT(0.334)EENVK;KCT(0.481)S(0.538)PRS(0.422)S(0.377)DT(0.181)EENVK 44.586999999999996 0.044363 13224300.0 4330.200000000001 3726.9 5188.6 4464.700000000001 4316.1 4300.8 4433.700000000001 5207.8 3774.8 4642.1 5998.4 True False 4769.798716275246 4040.978942556686 5540.729597586449 4740.474378930611 4012.952025736667 4265.775710725696 4602.426879713731 5103.926343559937 3616.1582832206027 4348.997013774256 5260.6348269905 0.9066964108215717 0.7681542390708853 1.0532435304497623 0.901122114503914 0.7628265708822054 0.8108861099499768 0.8748805098769199 0.9702111078635327 0.6873996014069146 0.8267057411894576 1.0 12.361021191877002 -6.5554554163504966 24.855694320658834 0.8509172584790984 0.9089003711404827 0.07338441137941387 0.10196562983938065 518.10143554754 395305.00003889203 0.01838298311673615 0.038267474510878786 2.7832010760604634e-07 6.5554554163504966 0.05798311266138434 KDAPT(ph)SPASVASSSSTPSSK ddPTM_A549_MK2206_60min_R1 2 KDAPTSPASVASSSSTPSSK 20 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 KDAPT(0.5)S(0.5)PASVASSSSTPSSK;KDAPT(0.577)S(0.416)PAS(0.007)VASSSSTPSSK 112.13 1.3923e-10 6969300.0 846.8000000000001 1913.47 1454.62 1491.13 2472.1 1428.54 1437.31 1273.52 2293.8 2203.3 2588.5 True False 989.7191377277069 2010.8574499088247 1660.9069889570135 1856.4569169393692 2108.457364771068 1579.7071546118939 1698.4506221580089 1454.0453599914297 1774.2579624459124 1705.572999741692 1945.7040110343457 0.5086689096156858 1.0334857915206965 0.8536277766493718 0.9541312072191637 1.083647539817838 0.8118948954482105 0.8729234315835656 0.7473106658285872 0.911884825432779 0.876583997395884 1.0 10.926076542421672 -12.494480322423623 0.01911032842668331 1.9937993226290356 2.5334852489780616e-06 0.0400612759501805 0.14674790700424317 2563.17365754878 6.240725583025322 385.1503218320916 273.9438176536014 3.202725204559585e-13 12.494480322423623 -1.9937967891437867 KDAPTS(ph)PASVASSSSTPSSK ddPTM_A549_PD325901_60min_R1 2 KDAPTSPASVASSSSTPSSK 20 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 KDAPT(0.171)S(0.826)PAS(0.003)VASSSSTPSSK;KDAPT(0.203)S(0.746)PAS(0.05)VASSSSTPSSK 100.93 7.7861e-10 9483200.0 1382.8 1522.56 1666.47 1341.3200000000002 1476.58 1973.8899999999999 1412.15 1858.9499999999998 1705.0900000000001 1593.25 1706.35 True False 1523.1808380364425 1650.871474624785 1779.5666754981876 1424.1702900412583 1372.8701147244612 1957.8152942811425 1465.890141008131 1821.871783931936 1633.430996910199 1492.6519230942547 1496.4797674438582 1.0178425870990508 1.1031699262093224 1.1891685502289624 0.951680283973293 0.9173997167161605 1.3082804972534263 0.9795589441960999 1.2174382999135904 1.0915155904180833 0.9974421008336505 1.0 10.547357058248698 -10.539882294745992 1.0349546667861607 1.0039254162631503 1.086930411077636 0.08012838470968775 0.11297622017898779 1.043157189288052 2.121348800862087 0.05624690344737447 0.019076099307331076 2.8848132576296423e-11 10.539882294745992 0.08300499481448576 KDASSS(ph)PASTASSASSTSLK ddPTM_A549_MK2206_60min_R1 2 KDASSSPASTASSASSTSLK 20 1 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 KDAS(0.031)S(0.156)S(0.813)PASTASSASSTSLK;KDAS(0.022)S(0.13)S(0.807)PAS(0.035)T(0.006)ASSASSTSLK 118.57 1.2005e-14 43659000.0 1939.97 2010.23 2208.43 2173.2 2656.2 2266.7 2046.69 1875.6799999999998 3279.2 2960.5 2955.8999999999996 True False 2267.389508287223 2112.54212061345 2521.618581913033 2705.6340975586563 2265.476498646863 2506.560689486314 2418.547080215527 2141.563384029089 2536.46643580636 2291.7209938434544 2221.868451310189 1.020487737224133 0.9507953179531078 1.1349090358729779 1.2177292026281759 1.0196267458187993 1.1281319053827188 1.0885194750343392 0.9638569658641375 1.1415916339739463 1.0314386490757699 1.0 11.117557687230432 -5.752511855066313 24.98847976769339 1.0770805624801587 0.9856415220029304 0.2056722476986722 0.07173093376938804 251.47696490017398 703877.0487954316 0.010501701065967517 0.03949375132639796 1.7680239547971204e-06 5.752511855066313 -0.09143904047722828 KDASSS(ph)PASTASSASSTSLK ddPTM_A549_PD325901_60min_R1 2 KDASSSPASTASSASSTSLK 20 1 A0A669KBK8;Q04724 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 KDAS(0.049)S(0.152)S(0.797)PAS(0.002)T(0.001)ASSASSTSLK;KDAS(0.041)S(0.143)S(0.812)PAS(0.004)TASSASSTSLK 138.99 5.9587e-18 66115000.0 3558.1 3107.3 3520.2 3449.3 4444.1 4003.6 3832.2 3617.7 3785.9 4273.3 4589.2 True False 3919.3156926652205 3369.1630760702997 3759.101940682232 3662.3554270713275 4131.961747312698 3970.9960089893507 3978.036468060302 3545.5421354692508 3626.791788821891 4003.48310871406 4024.757493335691 0.9738017008863108 0.8371095852729156 0.9339946436292524 0.9099567944492459 1.0266362020952864 0.9866423046766519 0.9883915924492964 0.8809331099675102 0.9011205755445482 0.9947141201285152 1.0 11.974686142745975 -7.592540284019266 0.006902657275015961 1.8753320361116084 3.824682892273728e-05 0.1000164730373605 0.053888416049846996 7506.666996766755 21.74525522530698 2905.4217416781603 3001.3170348441627 2.5554048574053754e-08 7.592540284019266 -1.8752937892826855 KDDDS(ph)DDESQSSHTGK ddPTM_A549_MK2206_60min_R1 4 KDDDSDDESQSSHTGK 16 1 O94874;O94874-2;O94874-3 O94874 UFL1 E3 UFM1-protein ligase 1 1 KDDDS(1)DDESQSSHTGK;KDDDS(1)DDESQSSHTGK;KDDDS(1)DDESQSSHTGK;KDDDS(0.956)DDES(0.044)QSSHTGK 177.73 7.3313e-29 43298200.0 2941.4900000000002 3287.58 3514.19 2713.8599999999997 3362.1600000000003 2594.43 2647.98 3248.09 4598.04 4609.719999999999 5455.42 True False 3437.9415994741057 3454.903779610472 4012.5549844790007 3378.7558218298036 2867.590717826419 2868.970860556748 3129.0836899916962 3708.5167043584393 3556.591281561076 3568.381050410419 4100.688652067605 0.8383815234889056 0.8425179458256304 0.9785075934638036 0.8239483922111969 0.6992949138873427 0.6996314775349224 0.7630629768524326 0.904364368772199 0.8673156104567484 0.8701906809265337 1.0 12.001650494757405 -9.819615718311177 0.6769594493660281 0.9905382253409486 0.8147750619556007 0.18423260945973885 0.08440710676742831 0.5150153200515912 0.49232093006921285 0.041531267494704295 0.019479241144157472 1.514901102612766e-10 9.819615718311177 -0.17576316338534792 KDDDS(ph)DDESQSSHTGK ddPTM_A549_PD325901_60min_R1 4 KDDDSDDESQSSHTGK 16 1 O94874;O94874-2;O94874-3 O94874 UFL1 E3 UFM1-protein ligase 1 1 KDDDS(1)DDESQSSHTGK;KDDDS(1)DDESQSSHTGK;KDDDS(1)DDESQSSHTGK;KDDDS(0.987)DDES(0.013)QSSHTGK 247.52 7.612e-67 94622000.0 10529.199999999999 11748.7 11352.1 13698.900000000001 17420.1 14749.8 13044.7 15780.5 15010.6 14650.300000000001 17242.5 True False 11598.116632812642 12738.804181066242 12122.521771722848 14545.049940540795 16196.572272082516 14629.682519080598 13541.123196833743 15465.745547937237 14379.756682767606 13725.27755776417 15121.78180921307 0.7669808213835221 0.8424142301342439 0.8016596142352155 0.9618608523817679 1.0710756494459286 0.9674575855979712 0.8954714046054879 1.022746243998482 0.9509300467492938 0.9076494907102768 1.0 13.884340522802972 -6.286805688883156 5.449347753459165 0.9794523395169498 0.80682786900031 0.6961645758155648 0.04944503989610227 0.06504194131338163 6.076747105652318 0.00619375917774174 0.015161783219966656 5.166474748862859e-07 6.286805688883156 -0.17262447051663976 KDDDS(ph)DDESQSSHTGKK ddPTM_A549_PD325901_60min_R1 1 KDDDSDDESQSSHTGKK 17 2 O94874;O94874-2;O94874-3 O94874 UFL1 E3 UFM1-protein ligase 1 1 KDDDS(0.999)DDESQSSHTGKK 63.69 0.00058766 3990200.0 1004.4 1031.3 791.82 980.89 1009.6 1341.4 978.86 992.29 917.96 1064.3 1228.6 True False 1106.3659485997998 1118.2112703476648 845.5576668004668 1041.4773475371799 938.6891789309187 1330.4760831397532 1016.1110529527449 972.4979975135545 879.3813334918893 997.0999163654257 1077.4899887370846 1.0267992836727518 1.037792723864014 0.7847475852574154 0.9665772846371271 0.8711813462240583 1.2347920602948628 0.9430352611848567 0.9025587315696639 0.8161387508784221 0.9253913509991092 1.0 10.073458749552833 -9.361787141438153 0.004341787318241146 1.054946037982109e-05 1.8696667976568808 0.0 0.11773351751311237 54347.70888171431 122.0885611156498 26480.919879544104 26088.121428199982 4.3472324067217377e-10 9.361787141438153 1.869656248196501 KDDEDEEEEEEVS(ph)DS ddPTM_A549_MK2206_60min_R1 2 KDDEDEEEEEEVSDS 15 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 KDDEDEEEEEEVS(0.5)DS(0.5);KDDEDEEEEEEVS(0.711)DS(0.289) 82.90799999999999 0.00020643 7356600.0 861.1600000000001 709.37 659.56 834.24 813.3 588.1700000000001 511.44000000000005 637.62 598.37 994.56 904.8299999999999 True False 1006.5027546594141 745.4739030357536 753.0955257293917 1038.6288374504563 693.6646473719956 650.4097590043523 604.3620278134106 728.0045876293544 462.8401504005403 769.8882052480815 680.1357389624137 1.4798557067371465 1.0960663590080078 1.1072723907705282 1.5270905173060667 1.0198914828828447 0.9562940480036969 0.8885903110096812 1.0703813164412848 0.6805114389469221 1.131962579150142 1.0 9.409678892586415 -6.9677550430671324 6.162043628340379 0.8780416239952885 1.275876677516513 0.4396435418362339 0.1725643924122021 0.10704577497213194 11.985338137288945 0.025083692637130475 0.04734756243775867 1.0770725480686966e-07 6.9677550430671324 0.3978350535212244 KDDEDEEEEEEVS(ph)DS ddPTM_A549_PD325901_60min_R1 2 KDDEDEEEEEEVSDS 15 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 KDDEDEEEEEEVS(0.992)DS(0.008);KDDEDEEEEEEVS(0.996)DS(0.004) 115.91 7.8843e-07 17148400.0 1212.02 1332.6999999999998 1404.55 1226.71 1506.3 1154.73 1417.7199999999998 1353.4299999999998 1342.21 1528.72 1221.76 True False 1335.0633781580336 1445.0113061110571 1499.8712092452777 1302.481090639453 1400.5026844528963 1145.3262617295115 1471.672110406151 1326.4347769047054 1285.8015813610052 1432.1963583070124 1071.4912653747522 1.2459862448725585 1.348598306683972 1.3997978870324252 1.2155778891803775 1.3070593570943139 1.0689086311206986 1.3734802680742677 1.2379333549124054 1.2000112580584579 1.3366383885603623 1.0 10.065404374105487 -11.758488232177948 0.19337109101112085 0.6828612558142573 1.3460616752921875 0.0 0.13223443898818413 6.4302857589604026 0.2314987342969301 1.053550565154636 0.10238576804371942 1.7438606091905588e-12 11.758488232177948 0.6632004194779302 KDDEENYLDLFSHK ddPTM_A549_MK2206_60min_R1 2 KDDEENYLDLFSHK 14 1 Q07666-3;Q07666;Q07666-2 Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 0 ; 77.078 0.00023398 3483200.0 957.34 1263.92 1150.2199999999998 1121.57 1421.12 1115.49 1306.53 1214.46 1750.07 1438.0 1537.55 False True 1118.9155872841789 1328.2481293611936 1313.3384917285168 1396.3547003491904 1212.0751305462802 1233.530411397666 1543.9095890017504 1386.6134241277655 1353.6819392875207 1113.1548012656256 1155.7339007787755 0.9681429146711132 1.149268121724362 1.136367541735638 1.2081974054825906 1.048749309620095 1.067313514440018 1.3358694315027084 1.19976875576066 1.1712747531030807 0.963158388376028 1.0 10.174593550823749 -10.707617168400395 1.026807180619085 1.002194662892882 1.1472447477266516 0.30294694099935593 0.09212720122237279 0.5685196952012627 1.0895289639747865 0.05756626359394491 0.01594541880534452 1.9605721609386095e-11 10.707617168400395 0.1450500848337697 KDDEENYLDLFSHK ddPTM_A549_PD325901_60min_R1 1 KDDEENYLDLFSHK 14 1 Q07666-3;Q07666;Q07666-2 Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 0 103.4 8.0131e-06 2986600.0 875.38 1090.5 1181.6 823.66 1176.9 1305.8 1059.7 792.42 1134.1 1326.1 915.34 False True 964.2479331793043 1182.4002621100826 1261.7904815380168 874.5356075324173 1094.2386040845863 1295.1659977366096 1100.0274633900901 776.614561458536 1086.4377209389863 1242.3698196863584 802.7589828183321 1.201167416145274 1.4729206242686979 1.5718173306614565 1.0894124217235057 1.3630973025588893 1.6133933415351285 1.3703085072036263 0.9674317922074093 1.353379711958766 1.5476249363471926 1.0 9.648823093475322 -13.444340959842227 0.2260052580478362 0.14632976991296226 1.3979435701703335 0.0 0.24430891005241032 19.589020815150615 0.4493803530604706 7.784770558956246 0.1257470157319365 3.59467010731367e-14 13.444340959842227 1.2516138002573713 KDDPVTNLNNAFEVAEK ddPTM_A549_MK2206_60min_R1 2 KDDPVTNLNNAFEVAEK 17 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 181.41 4.020599999999999e-39 12065400.0 4983.6 5393.3 5163.9 6040.299999999999 7975.200000000001 5549.0 5241.0 5129.8 8351.5 7370.799999999999 7787.900000000001 False True 5824.709842678083 5667.79593335316 5896.218668982358 7520.173771159374 6802.058644683561 6136.191496871908 6193.22185939716 5856.964859353627 6459.898584605033 5705.731160757074 5853.949494894494 0.995005141017716 0.9682003471837796 1.007220625002783 1.2846324994293294 1.161960596109679 1.0482139455120976 1.0579561482036293 1.0005150991585703 1.1035111577643462 0.9746806264272201 1.0 12.515194583572473 -10.970405111149818 1.1105828856371196 0.99795469306726 1.0740174696182991 0.11280703705963935 0.08634615302371107 1.2024399389679243 2.5151465123494385 0.07401591294267264 0.015265924795093694 1.0705202549590238e-11 10.970405111149818 0.0760627765510391 KDDPVTNLNNAFEVAEK ddPTM_A549_PD325901_60min_R1 4 KDDPVTNLNNAFEVAEK 17 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;;; 178.88 1.6069999999999996e-30 21269500.0 15724.3 13984.5 14281.7 15707.0 16968.4 17087.5 15808.0 16317.6 17332.6 16886.1 16558.8 False True 17320.61936038216 15163.022893607025 15250.942044838757 16677.1857168148 15776.5981218021 16948.345065342564 16409.582090469517 15992.132667090435 16604.17109774012 15819.908764200154 14522.172574881686 1.1927016616191997 1.0441290940057955 1.0501832261116073 1.148394679296164 1.0863800192741226 1.1670667717210106 1.1299674346834574 1.1012217755042568 1.1433668765553417 1.0893623996428123 1.0 13.82596968195608 -10.81853633087853 0.9735662413687663 0.9973297423505117 1.1168612584579287 0.16554348888260795 0.05068336259194604 0.386884782136412 0.6268108894033677 0.033205676443414524 0.007516885837647748 1.518670892396374e-11 10.81853633087853 0.11953151610741697 KDDRVEERDPPR ddPTM_A549_MK2206_60min_R1 2 KDDRVEERDPPR 12 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 92.925 7.5407e-05 30888000.0 2403.2 2809.7 2274.3999999999996 1781.21 3617.3 2632.7 2332.7 1888.49 3761.8 3862.2 4025.5 False True 2808.8014074010675 2952.7017288009865 2596.9441198964896 2217.6065299615566 3085.1999618083332 2911.2905665551757 2756.521395042119 2156.189240758067 2909.7583063602005 2989.726337585605 3025.857251851946 0.9282663303703335 0.9758232074542891 0.8582507050876428 0.732885376071291 1.0196118669907734 0.9621374454374374 0.9109885779823279 0.7125878920555135 0.9616310566466121 0.9880592799795075 1.0 11.563128213094798 -8.978700319379714 24.983232935170577 0.9830726350106214 0.8886115809385104 0.187085833500637 0.08980504120009954 181.0245827460165 212333.51730843174 0.015996214962748355 0.016379774489274395 1.0502669049752281e-09 8.978700319379714 -0.09446105407211092 KDDS(ph)DDDGGGWITPSNIK ddPTM_A549_MK2206_60min_R1 2 KDDSDDDGGGWITPSNIK 18 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK 194.43 8.114999999999999e-49 113848000.0 35134.0 29862.0 22772.0 21116.5 44722.0 37798.0 32336.0 36163.0 45625.0 48112.0 47065.0 True False 41063.76025617057 31381.848249085346 26001.412019997744 26290.043447955708 38143.45304287517 41797.75927171824 38211.032636036354 41289.21599454272 35291.01034815358 37243.465784764834 35377.46157208095 1.1607322411333523 0.8870576591580881 0.7349711048945761 0.7431297294858256 1.0781851310942294 1.181479886185617 1.0800953753615716 1.167105104768941 0.9975563191906454 1.0527455653900417 1.0 15.110542914046084 -6.781702941781387 24.993582487765654 1.0366402134550805 0.8714071689830508 0.3458770848821383 0.1220161267509923 240.16286453270413 296222.4102518342 0.018543431599958568 0.035073563754812395 1.6530921296456757e-07 6.781702941781387 -0.1652330444720297 KDDS(ph)DDDGGGWITPSNIK ddPTM_A549_PD325901_60min_R1 2 KDDSDDDGGGWITPSNIK 18 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK 229.03 1.2355999999999998e-64 208418000.0 49686.0 39662.0 36232.0 39755.0 36146.0 35042.0 30258.0 27692.0 47789.0 43131.0 58312.0 True False 54730.08614310002 43004.45593380113 38690.921400715466 42210.57605984417 33607.229656930474 34756.629570138066 31409.48474781292 27139.66133604627 45780.59452072412 40407.7012992175 51139.99367022377 1.0702012694023189 0.8409163327456658 0.7565687561522565 0.8253926727492197 0.6571613964922773 0.6796369548707061 0.6141863245106555 0.5306934825032706 0.8952014115594199 0.7901389577751329 1.0 15.642164361561601 -8.968886019294882 13.286605533527855 0.9538056141324149 0.7413615741413511 0.15316207530938408 0.1432462866274096 1.052559705963073 448.5473933100685 0.024803903234008474 0.026006115859801084 1.0742713181466796e-09 8.968886019294882 -0.21244403999106387 KDDS(ph)FLGK ddPTM_A549_PD325901_60min_R1 1 KDDSFLGK 8 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 KDDS(1)FLGK 55.401 0.027199 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KDDS(ph)HS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 3 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK 77.19 0.0014989 152468000.0 10134.5 10126.3 8450.9 9633.5 14232.8 9871.9 10596.2 10527.2 13229.6 11223.4 12443.3 True False 11163.346979375414 10979.678839252938 9024.428893389997 10228.539415734092 13233.137228494432 9791.506519418013 10999.444189463122 10317.226737571358 12673.605919173266 10514.752608602575 10912.852984577705 1.0229540336657805 1.0061235915822997 0.8269541343719674 0.9372928811731726 1.2126193990880116 0.8972453430148464 1.0079347907470018 0.9454197497347303 1.1613467108082458 0.963520045900212 1.0 13.413740699233594 -8.741590638091184 24.985440891842934 1.0761915181484027 0.9819267284871096 0.03444143752605633 0.10288037248940045 345.1645538451774 434490.479195415 0.01766924974527389 0.020021863478835483 1.8130482497365938e-09 8.741590638091184 -0.09426478966129315 KDDS(ph)HS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_A549_PD325901_60min_R1 1 KDDSHSAEDSEDEKEDHKNVR 21 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 KDDS(1)HS(1)AEDS(1)EDEKEDHKNVR 41.188 0.03735 28174000.0 1177.6 1759.1 1234.6 1171.1 1465.6 1630.7 1359.5 1900.4 1702.6 1858.8 2032.6 True False 1297.1490850966989 1907.3455305619866 1318.3873802529065 1243.4361872389259 1362.6613120455183 1617.420119856862 1411.2365164469452 1862.4950311650398 1631.0456429509893 1741.4350507752083 1782.6030857130067 0.727671288966643 1.0699776892841433 0.7395854920365388 0.697539568513411 0.764422166082182 0.9073360933905963 0.7916717567458254 1.0448175738572099 0.91497970357131 0.9769056638195305 1.0 10.79976979299839 -8.248094715797876 24.679369735541982 0.9651021851488697 0.8182105020979002 0.3872767186598203 0.1018431453902153 597.4983791356034 1105002.9860276433 0.016195759218760784 0.020844257508552486 5.648137804727211e-09 8.248094715797876 -0.14689168305096945 KDDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_MK2206_60min_R1 4 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 KDDS(0.045)HS(0.955)AEDS(1)EDEKEDHK;KDDS(0.114)HS(0.886)AEDS(1)EDEKEDHK;KDDS(0.027)HS(0.973)AEDS(1)EDEKEDHK;KDDS(0.17)HS(0.83)AEDS(1)EDEKEDHK 222.25 2.6091999999999994e-64 1599930000.0 30983.9 28709.8 26595.7 22289.2 28439.5 25230.899999999998 24027.800000000003 29623.899999999998 24680.199999999997 42331.1 40719.9 True False 36213.22483637401 30171.00619052943 30367.370176543718 27750.0550006002 24256.08722357785 27900.817091084067 28393.340239119083 33823.178544388866 19090.174106180824 32768.47510977425 30608.025017932192 1.1831284382170337 0.9857220834357419 0.9921375246770257 0.9066267746560712 0.7924747581514012 0.9115523485993603 0.9276436562791751 1.1050428286233112 0.6236983305847583 1.0705844330229188 1.0 14.901622337555207 -2.0000095937894207 0.5146596923015749 0.8488292114653186 12.532227889471628 0.12146492956751065 0.13653490612955502 98.41951451839203 0.9003693394142344 0.02836287267956322 1259.7967370662648 0.009999779097274883 2.0000095937894207 11.68339867800631 KDDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 6 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 KDDS(0.028)HS(0.972)AEDS(1)EDEKEDHK;KDDS(0.019)HS(0.981)AEDS(1)EDEKEDHK;KDDS(0.087)HS(0.913)AEDS(1)EDEKEDHK;KDDS(0.024)HS(0.976)AEDS(1)EDEKEDHK;KDDS(0.003)HS(0.997)AEDS(1)EDEKEDHK;KDDS(0.048)HS(0.955)AEDS(0.997)EDEKEDHK 208.88 7.790100000000001e-56 5034420800.0 61706.829999999994 61500.99 63085.4 58641.280000000006 72933.8 53425.530000000006 59704.73 63335.43 62067.56 66205.51 68474.84 True False 67971.26195543272 66683.89426504313 67366.75460732775 62263.41868159027 67811.1814959507 52990.450196858044 61976.826171831846 62072.155162966366 59459.07629895405 62025.28279989692 60052.868777774456 1.1318570342902396 1.110419795460676 1.1217907816630428 1.0368100633459485 1.1291913754676046 0.8823966494081926 1.0320377266434513 1.03362514441507 0.9901121713099547 1.032844626114722 1.0 15.873945545923501 -7.2240856380768 24.972269965353473 0.9944137387620648 1.103290448032949 0.5892754314995297 0.04605058930391634 284.1094772521244 189937.05498144106 0.006081501628080324 0.010533334571199888 5.969175694238135e-08 7.2240856380768 0.10887670927088422 KDDSHS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_A549_MK2206_60min_R1 4 KDDSHSAEDSEDEKEDHKNVR 21 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 KDDS(0.407)HS(0.593)AEDS(1)EDEKEDHKNVR;KDDS(0.024)HS(0.976)AEDS(1)EDEKEDHKNVR;KDDS(0.315)HS(0.685)AEDS(1)EDEKEDHKNVR;KDDS(0.292)HS(0.708)AEDS(1)EDEKEDHKNVR 142.2 4.8689e-22 972040000.0 10621.8 13888.0 12053.8 9054.2 17635.1 9314.1 9587.5 8722.6 20559.6 21556.8 22360.199999999997 True False 12414.500161922722 14594.839879555857 13763.210091632212 11272.479406458482 15041.000151075707 10299.7118798008 11329.424647389864 9959.05526184217 15902.883426934764 16687.10390815219 16807.545229874526 0.7386266103783319 0.8683504747388273 0.8188709239448502 0.6706797008299727 0.8948957117391017 0.612802865554311 0.67406777684896 0.5925347887293186 0.9461752569713885 0.9928340920654933 1.0 14.036821411482611 -8.8859802284628 7.381578147619796 0.9763501511701533 0.7386847436345991 0.5831596769877943 0.09274946699004065 0.11833364804127496 7.253531036178807 0.016405670250607546 0.017416315182077678 1.300228770441683e-09 8.8859802284628 -0.2376654075355542 KDDSHS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_A549_PD325901_60min_R1 6 KDDSHSAEDSEDEKEDHKNVR 21 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 KDDS(0.426)HS(0.574)AEDS(1)EDEKEDHKNVR;KDDS(0.109)HS(0.891)AEDS(1)EDEKEDHKNVR;KDDS(0.126)HS(0.874)AEDS(1)EDEKEDHKNVR;KDDS(0.093)HS(0.907)AEDS(1)EDEKEDHKNVR;KDDS(0.093)HS(0.907)AEDS(1)EDEKEDHKNVR;KDDS(0.141)HS(0.859)AEDS(0.999)EDEKEDHKNVR 159.86 2.743000000000001e-28 1876710000.0 27390.800000000003 25295.16 27697.980000000003 24700.32 31533.300000000003 32550.8 28722.629999999997 34629.73 34964.4 33205.200000000004 35727.4 True False 30171.493851958778 27426.871906571727 29577.731484284323 26226.00266790316 29318.509791979344 32285.71707698335 29815.685402276205 33939.012868652346 33494.967859976256 31108.618005165135 31333.156294648663 0.9629254572451648 0.8753306449135454 0.9439754873764777 0.8370048143659966 0.9357024078990281 1.0304010478030703 0.9515698042641295 1.0831661052432413 1.0689943759574838 0.9928338438881794 1.0 14.935402484122164 -7.190903263405007 3.527249075224828 1.0310423947160112 0.9035885545606855 0.584880869844396 0.0461988922900262 0.12207306854339577 2.9870969319258998 0.006908309128255512 0.012243782476230761 6.443127664910873e-08 7.190903263405007 -0.12745384015532568 KDDSHS(ph)AEDSEDEKEDHK ddPTM_A549_MK2206_60min_R1 1 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KDDS(0.002)HS(0.713)AEDS(0.286)EDEKEDHK 150.36 9.4096e-18 30070000.0 1716.7 2023.3 1790.5 1214.4 1427.5 1346.3 1579.6 1601.4 1551.4 2054.8 1861.7 True False 2006.4369907146365 2126.2773277869646 2044.419823546722 1511.9280545164884 1217.5166409978156 1488.7645723983865 1866.5928733264166 1828.4033540818157 1200.0103770767228 1590.6192528794227 1399.3885096938934 1.4337955305589374 1.5194331760320607 1.4609379806855243 1.080420515134294 0.8700347562980483 1.0638679409508969 1.3338632269709867 1.3065730791813963 0.8575248179929795 1.1366530751544899 1.0 10.45058083558225 -4.90159308239943 0.3426775581234419 0.9475152671155181 2.1793279851790976 0.34831506923537925 0.18139021311671236 4.969218145249494 0.33221750751159895 0.05789464843269954 2.656931696706631 1.2543158713429113e-05 4.90159308239943 1.2318127180635794 KDDSHS(ph)AEDSEDEKEDHK ddPTM_A549_PD325901_60min_R1 1 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KDDS(0.003)HS(0.994)AEDS(0.003)EDEKEDHK 237.22 6.344599999999999e-75 55589000.0 9665.9 10211.0 10700.0 9442.9 12356.0 10591.0 9769.4 10025.0 11350.0 10646.0 11110.0 True False 10647.17505234051 11071.516805507612 11426.166344326992 10026.166486618105 11488.157185885926 10504.75040743486 10141.179863020809 9825.043510539641 10872.998970688199 9973.80974314227 9743.540432092634 1.092741917226673 1.136293001775923 1.1726914281273197 1.029006505027123 1.179053678275608 1.0781245770618453 1.0408105691867873 1.0083648319638063 1.1159186998265465 1.023633022580908 1.0 13.250230372752728 -7.511333176991916 17.881620978919464 1.0513338098234024 1.121226593029979 0.4013621541025041 0.04773629496406216 13.491530716619556 20894.344303349906 0.008170153166140948 0.012620853905357799 3.08082353302903e-08 7.511333176991916 0.06989278320657655 KDDSHSAEDS(ph)EDEKEDHK ddPTM_A549_MK2206_60min_R1 6 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KDDSHS(0.008)AEDS(0.992)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK 320.34 1.5039999999999993e-173 1589553600.0 27953.850000000002 30460.07 26402.440000000002 20399.86 28706.120000000003 20750.46 20370.23 31289.18 22246.049999999996 32168.11 32575.829999999998 True False 32671.776473984028 32010.35745752181 30146.70300251489 25397.826615784514 24483.487774767225 22946.25990415942 24071.23711447202 35724.51708409499 17207.355194642005 24901.311609277323 24486.352363829632 1.3342851556055206 1.3072734142634643 1.2311634887296046 1.0372237660559553 0.999883012830174 0.9371040473163662 0.9830470768700198 1.4589562607481696 0.7027324829344569 1.0169465520744794 1.0 14.579690256817774 -5.435277664967626 0.3916930764086304 0.8904752519836515 1.685105617588098 0.23243893523215697 0.18148920464139762 3.8538540182815897 0.43199480321774947 0.051541972133343376 1.3956551453620092 3.670475546320856e-06 5.435277664967626 0.7946303656044466 KDDSHSAEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 8 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK 318.65 1.8063999999999996e-173 2464013000.0 66716.58 71317.4 75250.09999999999 64111.45 79722.4 44830.11 50529.47 70350.06 52499.33000000001 62874.38 66305.59999999999 True False 73489.5980874496 77327.56758643713 80357.0243016112 68071.4686588328 74122.97365134934 44465.028447535595 52452.39663163692 68946.87286474551 50292.965731437944 58904.48091659121 58150.431545829095 1.2637842253936071 1.329784930753167 1.381881822119941 1.1706098622017072 1.2746762436824237 0.764655175645466 0.9020121646096215 1.1856639930592365 0.8648769131111507 1.0129672188273933 1.0 15.8275022778123 -7.2376269361284695 22.444668455552467 0.9419261563894064 1.2858050748773489 0.6906923854257625 0.10947226202959955 92.79570296443599 87465.14872032905 0.016234670815702196 0.028102267647245837 5.785928517980596e-08 7.2376269361284695 0.3438789184879425 KDDSHSAEDS(ph)EDEKEDHKNVR ddPTM_A549_MK2206_60min_R1 4 KDDSHSAEDSEDEKEDHKNVR 21 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHS(0.003)AEDS(0.997)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR 229.69 1.3130999999999997e-76 543376000.0 19358.32 23877.83 22743.49 17846.800000000003 27773.34 15227.080000000002 14861.599999999999 15804.37 28436.010000000002 31616.77 30603.25 True False 22625.531150516075 25093.10955654201 25968.858873296074 22219.266801173308 23687.91847712104 16838.399498682338 17561.760348333668 18044.687846353216 21995.29913797697 24474.519698199605 23003.618418268055 0.983564008892978 1.0908331506931366 1.1289032186637737 0.9659031199860338 1.0297474965203541 0.7319891676393971 0.7634346922737686 0.7844282372560674 0.9561669272217479 1.0639421700180633 1.0 14.489573191306095 -7.0329137592250355 24.98149082307975 0.927203210350249 1.0451874308665752 0.2995560971888547 0.10842863947792311 835.1937961814825 633909.5066559282 0.017654017351537633 0.030593696904939367 9.270138884832255e-08 7.0329137592250355 0.11798422051632618 KDDSHSAEDS(ph)EDEKEDHKNVR ddPTM_A549_PD325901_60min_R1 4 KDDSHSAEDSEDEKEDHKNVR 21 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR 227.24 1.9614999999999997e-76 916824000.0 9901.350000000002 10424.66 11856.36 9940.25 12870.99 12348.06 10798.46 14971.0 12091.380000000001 13326.43 14055.34 True False 10906.527763011378 11303.182683547451 12661.00388768456 10554.236666554301 11966.976064904984 12247.501493346248 11209.401304444047 14672.391660477704 11583.221347506598 12484.996935497235 12326.62228414122 0.8847945131768286 0.9169732326502393 1.0271267826526604 0.8562148188910456 0.9708236197276088 0.9935813080849598 0.9093651972175273 1.1903010672562286 0.939691432129705 1.0128481791447257 1.0 13.589489909095175 -6.980268232349236 24.755675347797737 0.9851652010897576 0.9266541447809435 0.17863738731983136 0.07854001622805862 379.27171629176104 475835.178792192 0.010932030976807835 0.020657668663588147 1.0464820120200924e-07 6.980268232349236 -0.058511056308814036 KDDSKDDDET(ph)EEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK ddPTM_A549_MK2206_60min_R1 2 KDDSKDDDETEEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK 41 3 A0A0C4DGG8;Q8IX12-2;Q8IX12;H0YFJ7 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 KDDS(0.001)KDDDET(0.998)EEDNNQDEY(0.001)DPMEAEEAEDEEDDRDEEEMTK;KDDS(0.02)KDDDET(0.976)EEDNNQDEY(0.004)DPMEAEEAEDEEDDRDEEEMTK 136.0 9.429e-31 13871900.0 538.55 678.6500000000001 599.49 492.53999999999996 969.22 521.03 590.8 366.55 1205.5700000000002 670.87 867.5 True False 629.4440737166468 713.1903862514826 684.5066964635712 613.2123221109606 826.6490219179702 576.1650487682776 698.1407125609317 418.5095850122955 932.5103198996942 519.3200010605499 652.0758082180014 0.9652927861820195 1.0937231181762372 1.049734843459685 0.9404003558830878 1.2677191999762176 0.8835859903203995 1.0706434800407898 0.6418112430148302 1.4300642780293702 0.7964104702484704 1.0 9.34889588702637 -8.788869367224288 24.9999528512798 1.2030858219408143 1.001484313744274 0.0 0.21169324969424766 277.29124661780963 252724.56138351175 0.034772823622313355 0.037022610379050074 1.6260377831150207e-09 8.788869367224288 -0.20160150819654032 KDDSKDDDET(ph)EEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK ddPTM_A549_PD325901_60min_R1 2 KDDSKDDDETEEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK 41 3 A0A0C4DGG8;Q8IX12-2;Q8IX12;H0YFJ7 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 KDDS(0.002)KDDDET(0.998)EEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK;KDDS(0.01)KDDDET(0.99)EEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK 187.87 8.398299999999998e-82 33098000.0 1727.54 2156.83 2059.05 2053.32 1968.95 1930.66 1901.34 2124.25 1674.38 1756.6599999999999 2385.49 True False 1902.9185890522679 2338.593633495544 2198.7895150735053 2180.1489129719344 1830.6577445087485 1914.937345068283 1973.69653415317 2081.880167308112 1604.0116314132965 1645.7441878065297 2092.0898528670264 0.9095778493665003 1.1178265743656783 1.0510014720736092 1.0420914331113602 0.8750378201968677 0.915322705879018 0.9434090660343251 0.995119862779831 0.7667030310457932 0.7866508149978267 1.0 11.030729099679968 -6.75589072622402 24.802240056284063 0.9007918168241086 1.0378800340966836 0.3707812062571083 0.0828369020282834 116.87525890537268 522420.7184102476 0.013706214306397372 0.02790802649307994 1.754321855039175e-07 6.75589072622402 0.13708821727257503 KDDVS(ph)PVMQFSSK ddPTM_A549_MK2206_60min_R1 2 KDDVSPVMQFSSK 13 1 Q8IZE3-2;Q8IZE3 Q8IZE3-2 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin 1 KDDVS(1)PVMQFSSK;KDDVS(1)PVMQFSSK 93.37100000000001 7.354800000000001e-05 12436600.0 5778.700000000001 6012.4 6756.799999999999 6029.3 9495.0 6658.5 7024.3 6062.6 10018.400000000001 8935.1 7957.5 True False 6754.003284349435 6318.405478963252 7715.015841240145 7506.478770665566 8098.2980779504405 7363.098050445416 8300.524385988063 6921.992115933822 7749.248396097358 6916.654704303547 5981.433134172615 1.1291613786941859 1.0563363891615665 1.2898273153240438 1.254963250826995 1.3539059780981137 1.2309922865106009 1.3877149839837235 1.1572464258419417 1.29555045124972 1.156354095941975 1.0 12.546275476084029 -10.80970444819873 0.9384927015869508 0.9925748385976985 1.2443666710983015 0.22117504560539314 0.10248770962560715 0.42748045567327564 0.635317933207328 0.0758604069463764 0.01675096004063192 1.5498709987282337e-11 10.80970444819873 0.251791832500603 KDDVS(ph)PVMQFSSK ddPTM_A549_PD325901_60min_R1 2 KDDVSPVMQFSSK 13 1 Q8IZE3-2;Q8IZE3 Q8IZE3-2 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin 1 KDDVS(1)PVMQFSSK;KDDVS(1)PVMQFSSK 149.74 3.795e-13 26689000.0 7047.200000000001 7451.6 8277.7 8038.3 9169.7 8894.2 8090.9 8205.2 8572.9 9077.2 8081.299999999999 True False 7762.626556125557 8079.572483392475 8839.474499853786 8534.807534696149 8525.651905747669 8821.768584062616 8398.803627010358 8041.540849145122 8212.610826062806 8504.064042875354 7087.351331581475 1.0952789262097158 1.1399988663451224 1.2472183311224874 1.2042309087549758 1.202939082158532 1.2447200895421284 1.1850412423587648 1.134632738370362 1.1587701020926022 1.1998931116877132 1.0 12.791030852221054 -10.357843455647453 0.5315620320790481 0.9820103894554297 1.190084341473852 0.0 0.07242815516870876 0.47833687921165163 0.22296355308760457 0.0478585045142179 0.011047752838951146 4.386887975922516e-11 10.357843455647453 0.20807395201842227 KDEDLFR ddPTM_A549_MK2206_60min_R1 2 KDEDLFR 7 1 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 0 ; 60.91 0.028719 9325000.0 4639.0 4688.3 3926.5 4377.6 5536.7 5246.0 4646.0 5686.4 6298.8 5812.6 5757.9 False True 5421.949787339198 4926.914444651627 4483.336742338009 5450.112196517932 4722.258764422142 5801.128237987033 5490.118061201908 6492.464613869643 4872.131857116708 4499.529622973978 4328.054520044298 1.2527452605388398 1.13836700111652 1.0358780652079496 1.2592522047208752 1.0910811641933311 1.340354704664778 1.2684955875153152 1.5000884540158683 1.1257094462541197 1.0396194415147813 1.0 12.07950295741788 -9.252352503822701 2.446191727112403 1.0433350681011433 1.2280600007735927 0.3055010510739199 0.1211768843557756 0.23962812663059876 2.9487398927580375 0.025364618568172667 0.023353236245850506 5.593034473527768e-10 9.252352503822701 0.18472493267244938 KDEDLFR ddPTM_A549_PD325901_60min_R1 2 KDEDLFR 7 1 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 0 ; 73.931 0.019007 5483000.0 2724.8 2531.9 2371.6 2250.59 2283.3 2439.1 2350.4 2308.5 2175.7 2451.4 2356.5 False True 3001.4196901082605 2745.2720987038233 2532.5510375893355 2389.60383283926 2122.928884957377 2419.236778281029 2439.84575818823 2262.4551565167826 2084.262895200556 2296.6181856414587 2066.665439084274 1.4523007127066343 1.32835825614824 1.225428649308372 1.15626060592472 1.0272242641740952 1.1705991364296375 1.1805712294048472 1.0947370163209686 1.0085149031785616 1.1112675241035024 1.0 11.013089142491626 -2.0000000000757403 0.26816585287860645 0.9951032385517179 4.214778528773491 0.7655478458714384 0.06387468312065522 12.101505995197353 0.14942180537813277 0.024078525055047824 18.29430356036708 0.009999999998256015 2.0000000000757403 3.219675290221773 KDEEGQKEEDKPR ddPTM_A549_PD325901_60min_R1 1 KDEEGQKEEDKPR 13 3 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 0 37.156 0.041296 4209100.0 1218.4 1232.5 1365.3 1375.8 1400.6 1510.9 1073.7 1561.9 1541.5 1525.4 1694.9 False True 1342.091071061327 1336.3671004591258 1457.9574682158543 1460.7800413314965 1302.2266878076912 1498.595731337299 1114.5602410511842 1530.7466792131545 1476.716115710648 1429.0859836736083 1486.4380448563288 0.9028906893936817 0.8990398927715093 0.9808397149554745 0.9827385987504698 0.8760719575995227 1.0081790738087206 0.7498195063749944 1.029808598151905 0.9934595799809331 0.9614164469342119 1.0 10.537643617237448 KDEGS(ph)YSLEEPK ddPTM_A549_MK2206_60min_R1 2 KDEGSYSLEEPK 12 1 P18827 P18827 SDC1 Syndecan-1 1 KDEGS(0.985)YS(0.015)LEEPK;KDEGS(0.92)YS(0.08)LEEPK 131.48 2.7200000000000002e-08 61727000.0 22546.3 24087.0 22090.1 21149.5 31869.0 25564.0 21801.0 24120.0 33299.0 31552.0 31565.0 True False 26351.564235888283 25312.925416104707 25222.80834634429 26331.128449437118 27181.112316609022 28269.165511990166 25761.95950328516 27539.083864402044 25756.829667576254 24424.381286184314 23726.53935031839 1.110636652350005 1.0668612494373322 1.0630630946188038 1.1097753473720884 1.145599529509316 1.1914575949994501 1.085786642666852 1.160686919309726 1.0855704360117995 1.0294118718942702 1.0 14.534214070211096 -9.960137512837209 0.8221958797953254 1.007574858822309 1.1147611557442856 0.4942298429629467 0.03832974625613391 0.3254441615032176 0.4479908511583945 0.017258806458911244 0.008278799438541087 1.0961310677190298e-10 9.960137512837209 0.10718629692197656 KDEGS(ph)YSLEEPK ddPTM_A549_PD325901_60min_R1 2 KDEGSYSLEEPK 12 1 P18827 P18827 SDC1 Syndecan-1 1 KDEGS(0.992)YS(0.008)LEEPK;KDEGS(0.874)Y(0.001)S(0.125)LEEPK 121.72 5.1097e-06 68597600.0 18385.4 18204.8 18671.8 19393.4 21082.2 19024.6 18773.6 21374.3 19926.0 21134.9 20712.9 True False 20251.87227338388 19738.98238575116 19938.98063065464 20591.286272392954 19601.459001641677 18869.669965186018 19488.039621308097 20947.972818686034 19088.579514531546 19800.438807095394 18165.344609891228 1.1148630927902416 1.0866285671785751 1.0976384461100535 1.1335477919411876 1.0790579216960448 1.038773024702833 1.072814198674582 1.153183342708491 1.0508239686318754 1.090011735660321 1.0 14.148901114543985 -9.505719501486505 0.842206617658385 1.0072850411307348 1.095223320304206 0.0668083431994636 0.0399050259160292 0.282024790631018 0.42677521165376286 0.010501019467240294 0.007046841817490676 3.1209046372614243e-10 9.505719501486505 0.0879382791734713 KDEGSYS(ph)LEEPK ddPTM_A549_MK2206_60min_R1 1 KDEGSYSLEEPK 12 1 P18827 P18827 SDC1 Syndecan-1 1 KDEGS(0.007)YS(0.993)LEEPK 92.439 0.00011172 36051000.0 14619.0 17532.0 15811.0 14128.0 21802.0 16421.0 16505.0 15751.0 25315.0 23002.0 21915.0 True False 17086.329799765415 18424.30391477342 18053.237548225206 17589.360634230015 18594.954680934767 18158.65932062238 19503.74485581951 17983.75248541444 19581.19291974813 17805.832224417205 16472.90067676945 1.0372386827937985 1.1184614219617008 1.0959355551560142 1.0677755532779378 1.1288209068824109 1.1023352642579967 1.183989707612591 1.091717411419571 1.1886912514055332 1.0809166262701684 1.0 14.007806997972763 -5.250221081634878 22.530599225027235 1.10053319259452 1.0372385389071346 0.12680262688334443 0.050023040331123945 971.1976595236303 1950376.2326658661 0.009399870914689369 0.1789898644879633 5.62055132972612e-06 5.250221081634878 -0.06329465368738552 KDEGSYS(ph)LEEPK ddPTM_A549_PD325901_60min_R1 2 KDEGSYSLEEPK 12 1 P18827 P18827 SDC1 Syndecan-1 1 KDEGS(0.002)YS(0.998)LEEPK;KDEGS(0.214)YS(0.786)LEEPK 127.61 3.8813e-08 141142000.0 27159.0 26854.0 26468.0 28723.0 32328.0 28046.0 28132.0 26906.0 30671.0 29835.0 30485.0 True False 29916.16168660091 29117.080824121196 28264.27764501373 30497.15447533402 30057.392805545536 27817.602674621667 29202.578654421064 26369.338722651322 29382.00453127558 27951.21300832703 26735.538260337016 1.1189661264827588 1.0890777863005388 1.057180048884396 1.1406972314665336 1.1242486503492841 1.0404728868275648 1.0922756957447899 0.9863028926472387 1.0989868333739394 1.0454703674245267 1.0 14.706471102020107 -7.270305683721151 24.464186266308175 1.046197832475475 1.1043035886156014 0.41034818595038236 0.0369945237383462 474.0896005861397 1308120.09074352 0.006613669041191508 0.010676430719217323 5.3665393267507855e-08 7.270305683721151 0.05810575614012636 KDEKKEES(ph)EESDDDMGFGLFD ddPTM_A549_MK2206_60min_R1 4 KDEKKEESEESDDDMGFGLFD 21 3 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 KDEKKEES(0.997)EES(0.003)DDDMGFGLFD;KDEKKEES(0.967)EES(0.033)DDDMGFGLFD;KDEKKEES(0.5)EES(0.5)DDDMGFGLFD;KDEKKEES(0.5)EES(0.5)DDDMGFGLFD 118.63 4.0422e-15 83731900.0 11789.15 14403.679999999998 15860.85 12534.22 21484.869999999995 18020.31 17190.920000000002 16125.140000000001 25406.22 20702.800000000003 21230.499999999996 True False 13778.870302955362 15136.765788908502 18110.157027814035 15605.104462682524 18324.474083835186 19927.207243286324 20314.287641127237 18410.92797617013 19651.75173539653 16026.023101280942 15958.380918008388 0.8634253295336787 0.9485151323733145 1.1348367432047857 0.9778626379993721 1.1482664925711077 1.24869855818514 1.2729541765858832 1.1536839526993707 1.2314376900992707 1.0042386620309471 1.0 13.9620266676981 -5.376702889782673 0.9834168547370923 1.1359017832413794 0.7406987128277035 0.4578059486010132 0.09613593517230119 1.3282393200118934 1.1059476498961012 0.01691967428945247 0.528768096526109 4.2004624841155265e-06 5.376702889782673 -0.39520307041367586 KDEKKEESEES(ph)DDDMGFGLFD ddPTM_A549_MK2206_60min_R1 1 KDEKKEESEESDDDMGFGLFD 21 3 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 KDEKKEES(0.016)EES(0.984)DDDMGFGLFD 65.071 0.00043382 5852900.0 523.35 906.55 1361.7 851.48 1584.2 1214.3 955.71 770.77 1889.7 1278.0 1109.4 True False 611.6786853209677 952.6895228118781 1554.8095357294458 1060.0926382243892 1351.1662785770507 1342.7964200128959 1129.3501360893836 880.029007884127 1461.6859672308137 989.2989123904526 833.9053621176375 0.7335109151566761 1.1424432148902335 1.8644915914452551 1.2712385438227267 1.6202873131141278 1.6102503725398398 1.3542905315076608 1.0553104079452877 1.752819964508894 1.1863443471309565 1.0 9.703739854798735 -11.137961554922462 1.5151794444654387 1.0005923345821721 1.437631136096249 0.07403308275849174 0.3214015989348061 0.5379965873766777 2.217595345159517 0.23336380430753506 0.05034347014379506 7.278442326855479e-12 11.137961554922462 0.4370388015140769 KDEKKEESEES(ph)DDDMGFGLFD ddPTM_A549_PD325901_60min_R1 6 KDEKKEESEESDDDMGFGLFD 21 3 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 KDEKKEES(0.319)EES(0.681)DDDMGFGLFD;KDEKKEES(0.01)EES(0.99)DDDMGFGLFD;KDEKKEES(0.212)EES(0.788)DDDMGFGLFD;KDEKKEES(0.006)EES(0.994)DDDMGFGLFD;KDEKKEES(0.198)EES(0.802)DDDMGFGLFD;KDEKKEES(0.032)EES(0.968)DDDMGFGLFD 125.83 6.18e-16 247488200.0 36847.90000000001 36037.2 41845.2 41001.00000000001 40634.899999999994 39110.9 40898.799999999996 48208.4 38599.8 43260.899999999994 42042.799999999996 True False 40588.671682009735 39074.1813165644 44685.06690762916 43533.53864997287 37780.84480679476 38792.39379757757 42455.226214682116 47246.845643241824 36977.58464042029 40529.39939104862 36871.80213126771 1.100805204408224 1.059730717187513 1.2119035231460986 1.1806729298174425 1.024654142813274 1.0520883589978147 1.1514280225180422 1.2813815141185074 1.0028689270130053 1.0991976808391262 1.0 15.170230310282928 -8.92494277634894 24.999995499925248 1.0012612325176553 1.1297730723090418 0.21640734165735642 0.0769966826631019 27.770215858841215 9248.904711614337 0.012530492042777688 0.013339693018586896 1.18865883757227e-09 8.92494277634894 0.12851183979138647 KDELS(ph)DWS(ph)LAGEDDRDSR ddPTM_A549_PD325901_60min_R1 1 KDELSDWSLAGEDDRDSR 18 2 E7EU85;E9PFF5;P51114-2;B4DXZ6;P51114-3;P51114;H7C4S4 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 2 KDELS(0.983)DWS(0.723)LAGEDDRDS(0.294)R 45.972 0.02469 7751100.0 3530.9 3333.2 3177.6 2992.2 3813.4 3656.2 3208.6 3247.8 4401.8 3836.6 4290.9 True False 3889.354368688802 3614.100461866417 3393.2510444610707 3177.021398220746 3545.559939515815 3626.4251194092462 3330.705028813292 3183.0200811501895 4216.807653671834 3594.356421241746 3763.146502256194 1.0335378562479405 0.9603932399920077 0.9017058045512306 0.84424600432536 0.9421796194727139 0.9636683337295063 0.8850851346915057 0.845840064754803 1.1205536779244836 0.9551465559703164 1.0 11.877723740415016 -8.76436905090255 24.999999610354234 1.0569281256922691 0.9209082101515564 0.29898865585165246 0.06560093020648572 49.250598290122 420272.68691539817 0.011551588544898671 0.01256177499114307 1.7204060023353344e-09 8.76436905090255 -0.1360199155407127 KDELS(ph)DWSLAGEDDRDSR ddPTM_A549_MK2206_60min_R1 2 KDELSDWSLAGEDDRDSR 18 2 E7EU85;E9PFF5;P51114-2;B4DXZ6;P51114-3;P51114;H7C4S4 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 KDELS(0.997)DWS(0.003)LAGEDDRDSR;KDELS(0.996)DWS(0.004)LAGEDDRDSR 52.169 0.0030835 5952900.0 897.01 972.6100000000001 812.5699999999999 743.48 1288.74 996.0500000000001 1221.1599999999999 1099.3400000000001 1339.03 1294.98 1758.78 True False 1048.4033582110658 1022.1116946468047 927.8046445235184 925.6326333760851 1099.168053183555 1101.4513498755207 1443.0289650489276 1255.174811587551 1035.7418429915197 1002.4431185973302 1322.02638614139 0.7930275592085948 0.7731401622247881 0.7018049369131806 0.7001619960685785 0.8314267133439798 0.833153832194179 1.0915281118258984 0.9494324960117027 0.7834502048136486 0.7582625650333422 1.0 10.368535256345393 -7.163185119475804 2.3812668945682387 0.9130480732449384 0.7438514787156363 0.39450145533093317 0.09270066903075953 0.24968401043372979 2.7653213867673587 0.01535934167640516 0.02859329862290431 6.867756372016739e-08 7.163185119475804 -0.16919659452930214 KDELS(ph)DYAEK ddPTM_A549_MK2206_60min_R1 2 KDELSDYAEK 10 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 KDELS(0.918)DY(0.082)AEK;KDELS(0.977)DY(0.023)AEK 75.764 0.00063615 15480600.0 4371.2 5087.1 5207.4 3834.2 6493.5 5810.6 4788.5 5484.9 6905.1 6246.5 6833.7 True False 5108.951694420587 5346.011661239105 5945.887623086955 4773.579172123776 5538.314751887434 6425.473835235881 5658.508466652029 6262.4013718017695 5341.105875178855 4835.4113116173385 5136.703689474762 0.9945973144000813 1.0407475269000275 1.1575298055969692 0.9293078714867207 1.0781845881504872 1.2508943913587702 1.1015835852565252 1.2191478719384947 1.0397924813383568 0.9413451902092816 1.0 12.326627138947536 -8.981460739593052 22.49945603181986 1.0175552266030587 1.0979114640849137 0.19422061501657362 0.09072630154012332 57.16805916527121 69382.40749991547 0.01572261947782171 0.015995795990397337 1.0436124714782895e-09 8.981460739593052 0.08035623748185494 KDELS(ph)DYAEK ddPTM_A549_PD325901_60min_R1 2 KDELSDYAEK 10 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 KDELS(1)DYAEK;KDELS(0.995)DY(0.005)AEK 100.42 0.00018903 23703000.0 6391.1 6539.1 6694.2 7009.9 7647.6 7237.5 6679.9 7058.1 7084.5 7317.700000000001 7528.4 True False 7039.919767120848 7090.17290597345 7148.508667494738 7442.88560236201 7110.458958787733 7178.560199585476 6934.107249881537 6917.320658527667 6786.763102012387 6855.659173153502 6602.4545264596045 1.066257971017912 1.0738692523453655 1.0827047181993907 1.1272907026522248 1.076941754054084 1.0872562879179408 1.050231731561773 1.047689254171494 1.0279151601596284 1.0383500780928017 1.0 12.688786744715623 -8.500220395731352 0.7586830184261506 1.0074105836591583 1.0882233072299146 0.6733269688456532 0.018575663639720758 0.17991067538901268 0.2104408522359703 0.004083755463057244 0.004841603050240155 3.16067327486786e-09 8.500220395731352 0.0808127235707563 KDELSDWSLAGEDDRDS(ph)R ddPTM_A549_PD325901_60min_R1 2 KDELSDWSLAGEDDRDSR 18 2 E7EU85;E9PFF5;P51114-2;B4DXZ6;P51114-3;P51114;H7C4S4 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 KDELSDWSLAGEDDRDS(1)R;KDELSDWSLAGEDDRDS(1)R 100.94 1.6034e-09 8858900.0 1491.0900000000001 1597.3200000000002 1022.5 1596.4 1516.22 1526.3899999999999 1298.8400000000001 1448.1399999999999 1653.19 1604.02 2031.8 True False 1642.4643591175577 1731.9317621950267 1091.892998791995 1695.0060023125461 1409.7259378750375 1513.9595859129915 1348.2680669525196 1419.2557116561463 1583.7121734230861 1502.7419034562342 1781.901480641389 0.9217481308373786 0.9719570812476255 0.6127684446386857 0.9512344092684826 0.7911357351628732 0.8496314764652686 0.756645685297492 0.7964838275712585 0.8887765067982516 0.8433361326549477 1.0 10.79920185871652 -9.7153657797036 0.8899819813531686 0.9841306366917966 0.8314586605377122 0.0358862174177389 0.10489488198533588 0.447905148789584 0.7414457891019576 0.031434861877438984 0.01891115582603881 1.9259021602109145e-10 9.7153657797036 -0.15267197615408434 KDENYRS(ph)LPR ddPTM_A549_MK2206_60min_R1 1 KDENYRSLPR 10 2 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q8TEW0-6;Q8TEW0-7;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 KDENY(0.001)RS(0.999)LPR 79.875 0.00025247 17802000.0 1769.5 1790.8 1637.5 1680.9 2323.0 2003.2 1745.9 1671.8 2390.1 3029.6 2876.4 True False 2068.1483398785763 1881.9440708747582 1869.7221229029644 2092.7205754584684 1981.2897772594924 2215.177294383459 2063.10743070435 1908.7827696727734 1848.7461662054102 2345.2112558514204 2162.110495398569 0.9565414645921361 0.8704199322282258 0.8647671462129852 0.9679063951228315 0.9163684194106168 1.024543981030492 0.9542099883863852 0.8828331270464987 0.8550655344118329 1.0846861253587774 1.0 11.078224539043672 -11.11079687589504 1.4805281234889014 0.9996545287351887 0.9133236391720495 0.3492526174476904 0.05670401283442295 0.4650123787412275 1.8350303776433208 0.03887293774714952 0.00858626072373088 7.748241064663486e-12 11.11079687589504 -0.08633088956313917 KDENYRS(ph)LPR ddPTM_A549_PD325901_60min_R1 1 KDENYRSLPR 10 2 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q8TEW0-6;Q8TEW0-7;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 KDENYRS(1)LPR 80.469 0.00024381 28070000.0 2513.7 2537.4 3041.9 2974.3 3225.9 3232.1 2872.4 3150.7 3959.2 3482.0 3041.8 True False 2768.8889735118632 2751.2356030060755 3248.34162643068 3158.0157558745946 2999.323912750845 3205.7788491993415 2981.7107538375917 3087.8568168236648 3792.8085924888765 3262.1459257581614 2667.6778835588993 1.0379397717305885 1.0313222671905589 1.2176663631131988 1.1838070013391364 1.1243201179707285 1.2017113718851886 1.1177176870618828 1.1575073721810119 1.421764080237814 1.2228410131009495 1.0 11.3813687593376 -5.755790011880349 24.58993334464846 1.1897501135554043 1.0346309247648893 0.2581191099219241 0.0964928440879443 161.4254079737307 702605.6339081394 0.019938354247437975 0.07309590247527357 1.754728735324626e-06 5.755790011880349 -0.155119188790515 KDES(ph)FLGK ddPTM_A549_PD325901_60min_R1 2 KDESFLGK 8 1 Q9HBI1 Q9HBI1 PARVB Beta-parvin 1 KDES(1)FLGK;KDES(1)FLGK 53.568999999999996 0.010358 5227000.0 2632.4 3368.6 3008.0 2866.6 3611.0 3443.5 3150.0 3339.4 3305.7 3390.6 3895.9 True False 2899.6393101295453 3652.4837441027303 3212.14096857342 3043.6633714790423 3357.375817273722 3415.457277688787 3269.87497374614 3272.793047291379 3166.77292488141 3176.5169373565823 3416.728998144889 0.848659437638719 1.069000130266651 0.9401216690927054 0.8908120524430231 0.9826286542177057 0.9996277959250522 0.9570191184379905 0.9578731731630867 0.9268434595195602 0.9296953135824557 1.0 11.738400107923189 -7.942032720772347 0.004304071573112249 1.9154870318844417 7.324891976446385e-08 0.00608053115958751 0.056131769574817705 21104.16656027728 49.866919836408776 11021.41847549839 11169.362055910213 1.1427922308794985e-08 7.942032720772347 -1.9154869586355219 KDES(ph)PATWR ddPTM_A549_PD325901_60min_R1 2 KDESPATWR 9 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KDES(0.98)PAT(0.02)WR;KDES(0.775)PAT(0.225)WR 65.03 0.002512 24737000.0 8676.7 7765.200000000001 7138.0 8245.0 7943.4 7557.4 7443.6 6614.1 8787.599999999999 8649.9 11682.1 True False 9557.552196551056 8419.600655971768 7622.427604280944 8754.274924246392 7385.482987242333 7495.855040047981 7726.87027129421 6482.1765868389275 8418.28773170217 8103.743837798827 10245.27575893334 0.9328740798623576 0.821803224635542 0.743994381765136 0.8544694286645361 0.7208671743952408 0.7316401448259693 0.7541886087894498 0.6326990838862304 0.8216750753987142 0.7909737159327108 1.0 13.322671195591292 -10.06093135044001 0.9084107104047279 0.9831039259130272 0.7753657389511888 0.06311643829891778 0.09492988032050297 0.29792878773120735 0.4940784497173718 0.032261347286037974 0.015324429142204197 8.690977979811197e-11 10.06093135044001 -0.20773818696183843 KDETNVK ddPTM_A549_PD325901_60min_R1 1 KDETNVK 7 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 53.775 0.044528 4109600.0 3062.8 3252.3 3677.0 3911.4 4302.9 4210.6 3274.6 3930.1 3764.0 4064.6 4573.7 False True 3373.733201285811 3526.382734947844 3926.543331597227 4152.998294566081 4000.679148199139 4176.31026961998 3399.216694929878 3851.711072396194 3605.8121696625885 3807.960462331025 4011.1638950730935 0.8410858517722904 0.8791420214166004 0.9789037382442024 1.0353599112883927 0.9973861085838869 1.0411716845451606 0.8474389937307549 0.9602477418405279 0.898944112977184 0.9493405310633997 1.0 11.969805200148455 -5.635013571550179 4.325473305042821 0.9606580274269666 0.8494861880950978 0.37093699446525696 0.05413928621456159 0.18791538105754543 5.989720297349423 0.0082372864721897 0.03576201535778817 2.3173222333302746e-06 5.635013571550179 -0.1111718393318688 KDFTEDT(ph)IPR ddPTM_A549_PD325901_60min_R1 1 KDFTEDTIPR 10 1 O95243-2 O95243-2 MBD4 Methyl-CpG-binding domain protein 4 1 KDFT(0.012)EDT(0.988)IPR 40.577 0.0373 3966100.0 436.37 511.94 641.69 509.32 455.17 569.11 466.57 433.23 748.9 568.46 763.86 True False 480.66996116138483 555.0829804535865 685.2389421954381 540.7795396503545 423.2004294512544 564.475356847819 484.3255766669006 424.58888778763986 717.426337369903 532.5673385860096 669.9100625074961 0.7175141680395437 0.8285932866508857 1.0228819964736242 0.8072420014504609 0.6317272319618559 0.842613640904226 0.7229710430890581 0.6337998360531998 1.0709293344311799 0.7949833393942344 1.0 9.387823612085636 -8.778014397296213 24.999378385532093 1.03349443458516 0.7826019542898459 0.22624564283651638 0.12655097038411592 134.62671894237837 203050.86504100476 0.018827493778301306 0.020070424062716502 1.667191942555455e-09 8.778014397296213 -0.2508924802953141 KDGAS(ph)PFQR ddPTM_A549_MK2206_60min_R1 1 KDGASPFQR 9 1 Q8NEZ4;Q8NEZ4-3;C9J4Z5;H0YMU7 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 KDGAS(1)PFQR 42.785 0.031150999999999998 7399100.0 3782.7 4194.4 3309.6 3236.0 4707.9 3199.9 3462.2 2506.1 4523.9 5708.2 5288.1 True False 4421.12728186419 4407.8770442690875 3778.9510460822266 4028.8201452695594 4015.374146517419 3538.5112940782897 4091.2369245573054 2861.347349609366 3499.243873183826 4418.713655482927 3974.91882586468 1.112255992020779 1.1089225308419284 0.9506989228289904 1.0135603572717373 1.0101776469973418 0.8902096996429967 1.0292630123502766 0.7198505114093559 0.8803309014549804 1.1116487780154116 1.0 11.956709683243169 -5.6064739794280465 0.7102291346929323 0.9293102938083813 1.194998976886557 0.24324251732220725 0.09906110411082068 1.6710159111800142 0.7706943317467425 0.014482604427690277 0.3211890585789397 2.4747197286879375e-06 5.6064739794280465 0.2656886830781757 KDGAS(ph)PFQR ddPTM_A549_PD325901_60min_R1 2 KDGASPFQR 9 1 Q8NEZ4;Q8NEZ4-3;C9J4Z5;H0YMU7 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 KDGAS(1)PFQR;KDGAS(1)PFQR 73.92699999999999 0.00091741 23490000.0 7748.5 7616.400000000001 7187.299999999999 7940.7 9180.7 9197.7 8426.9 8428.3 8781.5 10412.099999999999 8906.8 True False 8535.12201585578 8258.26075775812 7675.073398745921 8431.17900436184 8535.87930369561 9122.796980687712 8747.590290876613 8260.190944626556 8412.444093488846 9754.678229059891 7811.320064857132 1.0926606444223186 1.0572170502796012 0.982557792411531 1.0793539292152978 1.0927575919079602 1.1678944026030722 1.1198606916943181 1.057464151518881 1.076955498384473 1.2487874198044788 1.0 12.93135066018603 -10.43730757462232 0.766386121642824 0.9996410255403125 1.0808135305888389 0.0 0.08523007028179218 0.6890409181017458 0.7272909422468633 0.03197629096158938 0.009219820301749738 3.6533596292574736e-11 10.43730757462232 0.08117250504852636 KDGS(ph)SPPLLEK ddPTM_A549_MK2206_60min_R1 2 KDGSSPPLLEK 11 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3 H7BYY2 BCOR BCL-6 corepressor 1 KDGS(0.692)S(0.308)PPLLEK;KDGS(0.61)S(0.39)PPLLEK 58.32 0.0048471 65752000.0 4820.799999999999 4201.6 4135.0 3858.5 5215.6 4668.5 4082.5 4034.5 5719.6 6544.4 6294.4 True False 5634.433182755939 4415.443493515403 4721.405177529012 4803.832673214649 4448.392149063542 5162.517571300504 4824.237405264052 4606.402730138062 4424.119732324368 5066.015494716802 4731.326763397565 1.1908780484884232 0.9332357950150697 0.9979030013430253 1.0153246464349077 0.9401997307556819 1.0911352839205088 1.0196373335668256 0.9735964055101968 0.9350695805984468 1.0707388747504087 1.0 12.208029086951914 -8.273847368001915 5.97647951631471 0.9687028369513834 1.0209548397101424 0.0 0.07453573625309844 0.2721496760521258 40.429186980646236 0.010602936878676172 0.013145266699610103 5.322953006030408e-09 8.273847368001915 0.052252002758759075 KDGS(ph)SPPLLEK ddPTM_A549_PD325901_60min_R1 2 KDGSSPPLLEK 11 1 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3 H7BYY2 BCOR BCL-6 corepressor 1 KDGS(0.692)S(0.308)PPLLEK;KDGS(0.7)S(0.3)PPLLEK 94.728 0.00011995 119551000.0 7141.5 7114.9 6879.3 6759.799999999999 8533.8 7333.6 6987.299999999999 7223.6 7334.299999999999 7007.9 8066.4 True False 7866.499822705567 7714.497592743725 7346.1706665914635 7177.337493380324 7934.415328011767 7273.877593047329 7253.205525097265 7079.519631195424 7026.064876715285 6565.419998024307 7074.283937122592 1.1119853108278266 1.090498722034832 1.0384331095394879 1.0145673480416801 1.1215856471883467 1.0282139729898827 1.0252918301788503 1.000740102336769 0.9931838952414286 0.9280684881153834 1.0 12.78836840961807 -7.7370753972495185 1.8043650272066045 0.9972220034954894 1.0708599845195441 0.5543334100968356 0.03632017466152001 0.1876931122105947 1.2505104319233173 0.004777419267915533 0.007419160944291204 1.8319963444724358e-08 7.7370753972495185 0.07363798102405472 KDHNIPES(ph)PKPVK ddPTM_A549_MK2206_60min_R1 2 KDHNIPESPKPVK 13 2 P35580-5 P35580-5 MYH10 Myosin-10 1 KDHNIPES(1)PKPVK;KDHNIPES(1)PKPVK 62.646 0.0017742 6665500.0 2104.69 2710.8999999999996 2189.7 1918.81 3057.8 2700.5 2549.1000000000004 2867.1000000000004 3250.9 3106.6 3371.4 True False 2459.9102172698736 2848.8732308099056 2500.232386272135 2388.9185361386535 2608.0016706431657 2986.2651175531796 3012.238473915149 3273.5202051254996 2514.5763406205488 2404.816902372597 2534.1883340935656 0.9706895830020226 1.1241758130138726 0.9866008586005207 0.9426760055673319 1.029127012999214 1.1783911548236663 1.1886403363910099 1.2917430646670465 0.9922610355319027 0.948949559122944 1.0 11.30730803035874 -4.387574367908931 16.412470576917755 1.0402674172476132 1.0337909219253592 0.0 0.113220503165574 0.0 0.0 0.01557408049353566 0.0 4.0966195393371635e-05 4.387574367908931 -0.006476495322254028 KDHNIPQES(ph)PKPVK ddPTM_A549_PD325901_60min_R1 2 KDHNIPQESPKPVK 14 2 P35580-2;P35580-4 P35580-2 MYH10 Myosin-10 1 KDHNIPQES(1)PKPVK;KDHNIPQES(1)PKPVK 80.638 0.00010305 17893800.0 4252.0 4463.9 3945.2 4049.0 5162.5 5031.299999999999 5101.7 4258.4 4730.7 5689.1 5518.9 True False 4683.659909843042 4840.088519058414 4212.944996414844 4299.097534053805 4799.903809658151 4990.326760922195 5295.847985257361 4173.462871349826 4531.885130452395 5329.889255092121 4840.110287189563 0.9676762784185722 0.9999955025547235 0.8704233470806126 0.888223052568106 0.9916930658299611 1.0310357543153952 1.0941585358651869 0.8622660691009111 0.9363185674605484 1.1011916958171115 1.0 12.240824205915818 -6.788316548478576 24.83450412315965 0.976512595408711 0.9320980513599035 0.11964688884855967 0.07349262238714592 394.6997167224684 364701.52128666575 0.009658119674630001 0.01825565233857348 1.6281089043497864e-07 6.788316548478576 -0.044414544048807514 KDHRPET(ph)PSIK ddPTM_A549_PD325901_60min_R1 1 KDHRPETPSIK 11 2 E5RJ29;Q9NYI0-2;Q9NYI0;A0A087X1Z0;A0A087WXD8;B4DKF8;Q9NYI0-3 E5RJ29 PSD3 PH and SEC7 domain-containing protein 3 1 KDHRPET(0.5)PS(0.5)IK 52.265 0.0079587 3288200.0 1069.7 1239.9 1043.9 1203.0 1670.4 1340.5 1138.4 1216.3 1349.4 1420.2 1688.9 True False 1178.295156528481 1344.3907244294292 1114.7453314806496 1277.3065777887696 1553.076866567162 1329.5834124413582 1181.7224349563833 1192.0399423311092 1292.689410664904 1330.5283296271518 1481.1760068191952 0.7955132618296007 0.907650892426005 0.752608283113193 0.8623597546194173 1.0485430896915302 0.8976538954993066 0.7978271518819129 0.8047929056662201 0.8727453082641654 0.8982918461422035 1.0 10.532527369635794 -10.392726077099903 0.7994322520918155 0.9987243088685882 0.8621040756876732 0.11017296267445853 0.0805439690810626 0.621421354189921 0.7331258793432824 0.04849679795759605 0.015267145416855964 4.0483115065914915e-11 10.392726077099903 -0.13662023318091499 KDIDHETVVEEQIIGENS(ph)PPDYSEYMTGK ddPTM_A549_PD325901_60min_R1 1 KDIDHETVVEEQIIGENSPPDYSEYMTGK 29 1 P25490;A0A494C032;H0YJU4;H0YJV7 P25490 YY1 Transcriptional repressor protein YY1 1 KDIDHETVVEEQIIGENS(0.996)PPDY(0.004)S(0.001)EYMTGK 143.8 3.1723e-36 6147600.0 1202.9 1761.8 1585.0 1910.6 1522.5 1517.3 1791.1 2066.4 1513.5 1712.9 2242.9 True False 1325.0175224718237 1910.2730690376375 1692.5676313792783 2028.6134227125724 1415.5648523398613 1504.9436118592116 1859.2612906275276 2025.18403094056 1449.8928583380264 1604.7472016746565 1967.0375189145425 0.6736107012351241 0.9711421620934668 0.860465352136891 1.0313038786530158 0.7196430361536791 0.7650812947836779 0.9452088598968421 1.029560448881577 0.7370946636229446 0.8158193152107204 1.0 10.941808760242806 -11.151564080475659 1.5372533415496976 0.9999049494121433 0.849472514306954 0.0 0.13090612102594915 0.5757563751733399 2.4420333410879977 0.08712718312393125 0.018623254720829402 7.054007539626671e-12 11.151564080475659 -0.15043243510518922 KDIS(ph)ENKR ddPTM_A549_MK2206_60min_R1 2 KDISENKR 8 2 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 KDIS(1)ENKR;KDIS(1)ENKR 61.435 0.0022256 47116000.0 11494.1 10856.9 8589.6 6608.299999999999 5101.8 3614.8999999999996 4061.6000000000004 3655.5 6100.5 16135.1 15745.0 True False 13434.02307623528 11409.469836430731 9807.734440847204 8227.333796657862 4351.331978313595 3997.4263186235817 4799.540145798035 4173.6783194992395 4718.746490496678 12490.169703686373 11835.081960106538 1.135101820293127 0.9640380924179105 0.8287001707218355 0.6951649193803978 0.36766386519172234 0.3377607634740535 0.4055350154714797 0.352653098100021 0.3987083914080643 1.0553513482870667 1.0 13.530782076583517 -3.7122172489999157 14.682661419964884 0.6674723858069336 0.9658311694492978 0.0 0.3064408355511361 0.0 0.0 0.044108838270492084 0.0 0.00019399152226852703 3.7122172489999157 0.29835878364236423 KDIS(ph)ENKR ddPTM_A549_PD325901_60min_R1 4 KDISENKR 8 2 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 KDIS(1)ENKR;KDIS(1)ENKR;KDIS(1)ENKR;KDIS(1)ENKR 68.44 0.0015482 177103000.0 25589.4 24159.3 23567.3 23425.300000000003 24998.499999999996 23401.6 18473.7 19547.699999999997 25567.7 27461.5 30651.199999999997 True False 28187.217050079384 26195.288998070737 25166.718699687604 24872.227578283702 23242.69160014321 23211.025128375753 19176.72676269652 19157.805788626 24493.178483071795 25727.576203391083 26881.296713965614 1.0485810022488724 0.9744801107180787 0.9362166925010267 0.9252614501056364 0.8646417562166172 0.8634637448987702 0.7133854801258026 0.7126816087957901 0.9111606015027868 0.9570809205057753 1.0 14.714315112818113 -5.416414254019937 1.3811112470371667 0.9072547511735767 1.0818940872806255 0.214782348027309 0.09078116322691016 1.5705890396499822 3.226460340541481 0.01610678611891003 0.3496565986642075 3.833414188678947e-06 5.416414254019937 0.17463933610704885 KDKDPVNKS(ph)GGK ddPTM_A549_PD325901_60min_R1 1 KDKDPVNKSGGK 12 3 P62851;E9PQK3;E9PK60 P62851 RPS25 40S ribosomal protein S25 1 KDKDPVNKS(1)GGK 63.708999999999996 0.0020223 11618000.0 2076.9 2210.2 1970.4 1628.5 2095.6 1754.2 1298.8 1640.8 1805.5 2121.0 2895.5 True False 2287.7453590670284 2396.461310697574 2104.123192977749 1729.0887464081575 1948.4122854275292 1739.914376803156 1348.22654473063 1608.072956817302 1729.621113795379 1987.079698027876 2539.3718560867883 0.900909944946968 0.943722088182295 0.8285998712375413 0.6809119909963522 0.7672812001744648 0.6851751044781568 0.5309291514352168 0.6332561940319239 0.68112163630133 0.7825083566492688 1.0 11.310255957966028 -4.3593334626273 19.939043621478135 0.7976826719251249 0.7665114801136751 0.0 0.13918574632706984 0.0 0.0 0.02280561995166793 0.0 4.3718629321673804e-05 4.3593334626273 -0.031171191811449783 KDKS(ph)PVREPIDNLTPEER ddPTM_A549_MK2206_60min_R1 7 KDKSPVREPIDNLTPEER 18 3 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(0.997)PVREPIDNLT(0.003)PEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER 201.95 1.478e-49 3529604800.0 26213.9 24932.4 22761.5 21208.7 30499.5 24250.4 23396.7 23896.800000000003 33344.00000000001 32886.4 36696.200000000004 True False 30638.1654516773 26201.352665109338 25989.422962110424 26404.832452094706 26013.063952443335 26816.56123188729 27647.577538209778 27284.24458088072 25791.6372394265 25457.339399403256 27583.52077640278 1.110741652598885 0.9498915268106071 0.9422083269494705 0.957268387387428 0.9430653963034717 0.972195009087759 1.0023222837405803 0.9891501814453619 0.9350378963040424 0.9229184195072576 1.0 14.751518994576593 -5.257137475641232 24.575327242481855 0.9672686719449335 1.1107417254978404 0.7285770494724895 0.02598027986082458 148.96954072574331 850972.2580572704 0.0038135950443911795 0.04106606049396471 5.531749743125014e-06 5.257137475641232 0.14347305355290696 KDKS(ph)PVREPIDNLTPEER ddPTM_A549_PD325901_60min_R1 5 KDKSPVREPIDNLTPEER 18 3 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(0.997)PVREPIDNLT(0.003)PEER 195.36 3.1517e-49 3718544100.0 19479.1 18994.100000000002 20161.8 18787.4 22846.699999999997 18314.300000000003 18864.899999999998 18504.5 21356.0 19603.199999999997 22312.0 True False 21456.60389224448 20594.79946679976 21530.100990752504 19947.855028718826 21242.02660883621 18165.154412886826 19582.814092769386 18135.413231000577 20458.481587490507 18365.45060649697 19567.765447421323 1.0965280603908747 1.0524860144168267 1.1002840895964328 1.019424271121749 1.0855622051436398 0.9283203266973268 1.0007690528276465 0.9268004197888878 1.0455195634096566 0.938556354625418 1.0 14.256191395504587 -7.17684593575174 24.99999787680675 1.006550612459509 1.0686139147281457 0.45141035743511726 0.046169116091144394 79.49375695731223 23491.830773517657 0.006402627885469439 0.011089676702145102 6.655092010858765e-08 7.17684593575174 0.062063302268636766 KDLGSTEDGDGT(ph)DDFLTDKEDEK ddPTM_A549_MK2206_60min_R1 1 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 KDLGSTEDGDGT(1)DDFLTDKEDEK 186.56 3.3487999999999995e-50 13773000.0 2358.4 2665.9 3026.5 2164.8 3250.7 2897.1 2503.9 3014.3 3715.0 3828.5 3930.1 True False 2756.440262655908 2801.5829230204467 3455.703209139433 2695.1760971815643 2772.526336176251 3203.669199060662 2958.8262189934253 3441.586255906596 2873.5584316359586 2963.639190991272 2954.147704758001 0.9330746252857763 0.9483557367521499 1.1697801039445719 0.912336269727024 0.9385198755332281 1.0844647997460577 1.0015837103296794 1.165001414913519 0.9727199581144017 1.0032129355678403 1.0 11.528526246037154 KDLGSTEDGDGT(ph)DDFLTDKEDEK ddPTM_A549_PD325901_60min_R1 1 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 KDLGS(0.153)T(0.153)EDGDGT(0.679)DDFLT(0.016)DKEDEK 68.375 0.00015583 34497000.0 1784.3 1903.0 1877.1 2293.6 1733.4 2283.8 1876.4 2536.2 1735.7 1833.9 2074.1 True False 1965.4408224677643 2063.3724885790807 2004.4912939192702 2435.2704628564607 1611.6519639053636 2265.2014899914757 1947.8074288054793 2485.613501389589 1662.7545650593408 1718.1072410246684 1818.9988488031806 1.0805069083803631 1.1343451316292403 1.1019750206208956 1.3387971435269237 0.8860104364363716 1.2453012224179671 1.0708128980329201 1.3664733779380953 0.9141042426460899 0.9445345400603775 1.0 10.828928914607799 KDLGSTEDGDGTDDFLT(ph)DKEDEK ddPTM_A549_MK2206_60min_R1 2 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 KDLGSTEDGDGTDDFLT(1)DKEDEK;KDLGSTEDGDGT(0.002)DDFLT(0.998)DKEDEK 126.05 1.1675e-16 36567000.0 5708.0 6186.2 6041.7 5396.2 7481.2 6779.1 5818.5 6122.9 8302.9 8071.700000000001 8446.9 True False 6671.370852798475 6501.051156603434 6898.503908362039 6718.269242244623 6380.725390285716 7496.4598623976135 6875.64613411608 6990.839825594827 6422.306407006786 6248.297363960888 6349.3016074197485 1.0507251451092445 1.0239001954177687 1.0864980646533622 1.0581115306278255 1.0049491715481347 1.180674714465809 1.0828980192217124 1.1010407534311146 1.011498083427274 0.9840920703245807 1.0 12.632382195771477 -8.835184319022835 7.240143454733829 1.0051694444207258 1.073385643389162 0.3679922387735346 0.04360352884587448 0.18712232770635207 15.443613598498503 0.007468863987387012 0.00793979330633936 1.4615567431674758e-09 8.835184319022835 0.06821619896843623 KDLGSTEDGDGTDDFLT(ph)DKEDEK ddPTM_A549_PD325901_60min_R1 2 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 KDLGSTEDGDGTDDFLT(1)DKEDEK;KDLGSTEDGDGTDDFLT(1)DKEDEK 299.52 1.9335999999999992e-157 159552000.0 18145.4 19328.4 20223.5 18281.0 21810.7 18716.5 21203.0 21467.6 19294.5 20389.8 19868.9 True False 19987.507650062544 20957.272101025697 21595.98832378476 19410.175850836655 20278.791674830216 18564.079029435798 22009.89176772679 21039.41187699358 18483.619263431137 19102.384548254962 17425.151259334416 1.147049305489128 1.2027024494148464 1.2393572946585518 1.1139172086347824 1.1637656036969632 1.0653611410971984 1.2631105142307668 1.2074163124250101 1.0607436910213168 1.0962535856337015 1.0 14.08888355903738 -8.904360240670213 3.7987515221934807 1.0254055092150367 1.1750297808158054 0.4640596488545766 0.057614619315521066 0.11192711673839523 2.943498545999739 0.009943908410718105 0.010412683116715102 1.2463492575910825e-09 8.904360240670213 0.14962427160076874 KDLRS(ph)PLTATPTFVTDSESTR ddPTM_A549_MK2206_60min_R1 1 KDLRSPLTATPTFVTDSESTR 21 2 A0A087WUK4;P13056-2;P13056-3;P13056 A0A087WUK4 NR2C1 Nuclear receptor subfamily 2 group C member 1 1 KDLRS(0.636)PLT(0.18)AT(0.18)PT(0.005)FVTDSESTR 43.494 0.011058 3229500.0 500.11 587.66 772.58 599.75 944.77 617.38 513.5 479.0 1004.5 812.72 849.05 True False 584.5163414844161 617.5693839011949 882.143461198395 746.6887769238007 805.7955845292507 682.7107418163238 606.7963031483381 546.8997168759772 776.9823538568825 629.1259875414461 638.2074524120967 0.915872008819772 0.9676624451298704 1.3822205583221339 1.1699781538145633 1.2625919385362188 1.0697316981116838 0.9507822274010738 0.8569309474669669 1.2174448150366903 0.9857703559613299 1.0 9.317881644984242 -7.425454547462959 22.694944209989284 1.0698567022940861 1.1473587501044968 0.08841004098942529 0.1501745824224978 60.441856444906804 14067.530246300998 0.02458768789948531 0.03930612443734119 3.754442457853266e-08 7.425454547462959 0.0775020478104107 KDLSLGLDDS(ph)RTNTPQGVLPSSQLK ddPTM_A549_MK2206_60min_R1 1 KDLSLGLDDSRTNTPQGVLPSSQLK 25 2 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61 Q14004 CDK13 Cyclin-dependent kinase 13 1 KDLS(0.002)LGLDDS(0.333)RT(0.333)NT(0.333)PQGVLPSSQLK 65.558 4.9166e-05 4848400.0 1281.9 1575.9 1859.5 1515.9 1685.1 1465.2 1417.4 1385.9 2310.3 2370.5 2342.2 True False 1498.2533805540234 1656.1065787868727 2123.2050610919464 1887.2955680513367 1437.2240222384712 1620.246491478956 1674.9232328772239 1582.3555691407457 1787.0207387909966 1835.0024036162492 1760.5670985685315 0.85100612284088 0.9406665500754883 1.2059779276906093 1.071981618641996 0.8163415205288332 0.9202980635025689 0.9513543870262359 0.8987760650686448 1.0150256359124135 1.042279163974062 1.0 10.781824496769339 KDLYANTVLSGGTTMYPGIADR ddPTM_A549_MK2206_60min_R1 3 KDLYANTVLSGGTTMYPGIADR 22 1 P60709;P63261;A0A2R8Y793 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;; 182.77 2.6026e-49 25054900.0 5882.5 6013.7 5744.200000000001 6042.299999999999 8400.6 5745.5 6592.4 6808.900000000001 9531.5 8074.0 8810.1 False True 6875.322186683085 6319.771643410503 6558.813934888066 7522.663771249152 7164.882868207534 6353.484996445767 7790.153746592224 7774.082426381717 7372.630468677827 6250.077792363465 6622.309023609699 1.0382061849079152 0.954315423952492 0.9904119411378627 1.1359578274631295 1.081931218048488 0.9594062997958074 1.1763500795295043 1.173923234126608 1.1133020888021232 0.9437913226460494 1.0 12.693118618928716 -6.218459330814247 21.722656136506366 1.071674179206331 0.9903113157208255 0.17155539618368143 0.07691040554643135 138.82409252340875 70161.89945273078 0.010438008994045383 0.02761566751788434 6.047009754693441e-07 6.218459330814247 -0.08136286348550537 KDLYANTVLSGGTTMYPGIADR ddPTM_A549_PD325901_60min_R1 3 KDLYANTVLSGGTTMYPGIADR 22 1 P60709;P63261;A0A2R8Y793 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;; 199.04 2.0258999999999997e-60 45889700.0 7690.900000000001 8219.5 8779.9 7890.9 9719.4 8711.6 9340.900000000001 9675.4 9540.5 9018.5 9303.8 False True 8471.67450625866 8912.186111337758 9375.75681182772 8378.302971465839 9036.74287410972 8640.655617921773 9696.373061036613 9482.416556795539 9139.545962982449 8449.070370893163 8159.491581647477 1.0382600951894296 1.0922477242801818 1.1490613989866594 1.0268167921528981 1.1075129845633247 1.058969855101823 1.1883550542347425 1.16213326062173 1.120112187325413 1.035489807955316 1.0 12.994263545255011 -10.67058159309433 1.003558401221042 1.001762895890968 1.1061184258222145 0.31252247920162 0.04890980640215243 0.42638474105473767 0.7832305073051181 0.030344447122810692 0.008611514451280198 2.1351009161879307e-11 10.67058159309433 0.10435552993124664 KDNEESEQPPVPGT(ph)PTLR ddPTM_A549_MK2206_60min_R1 4 KDNEESEQPPVPGTPTLR 18 1 A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439;A0A2R8YDC1 A0A2R8Y6V8 ABCC4 Multidrug resistance-associated protein 4 1 KDNEESEQPPVPGT(0.979)PT(0.021)LR;KDNEESEQPPVPGT(0.999)PT(0.001)LR;KDNEESEQPPVPGT(0.98)PT(0.02)LR;KDNEESEQPPVPGT(0.991)PT(0.009)LR 208.63 1.5524999999999998e-55 415639000.0 22110.1 25848.9 20986.7 22937.2 28647.4 24032.699999999997 22533.4 22564.199999999997 32724.1 31278.5 31054.9 True False 25841.744339954395 27164.498600421342 23962.929634642824 28556.815029690028 24433.40540898131 26575.82436238484 26627.42710294599 25762.744449964346 25312.143599649597 24212.665126138298 23343.11125836218 1.1070394196359379 1.163705141948044 1.026552517760828 1.2233508512906628 1.0467073192836946 1.1384868138716773 1.1406974335268727 1.1036551282655342 1.0843517524075568 1.03725098416196 1.0 14.51070924127458 -9.93181720863367 0.5430118731437282 0.9969482613406696 1.1227099889935366 0.3486869186309427 0.05151443041650375 0.5715251230740587 0.3355658528515462 0.03243953347776178 0.01180538712279278 1.1699917283505705e-10 9.93181720863367 0.12576172765286697 KDNEESEQPPVPGT(ph)PTLR ddPTM_A549_PD325901_60min_R1 2 KDNEESEQPPVPGTPTLR 18 1 A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439;A0A2R8YDC1 A0A2R8Y6V8 ABCC4 Multidrug resistance-associated protein 4 1 KDNEESEQPPVPGT(0.995)PT(0.005)LR;KDNEESEQPPVPGT(0.967)PT(0.033)LR 214.25 8.5889e-56 756850000.0 29022.0 27489.0 29271.0 30575.0 31747.0 30738.0 31472.0 31890.0 33902.0 33178.0 35870.0 True False 31968.292075132802 29805.594502653887 31257.506080822008 32463.548309136848 29517.200241204322 30487.679919151433 32669.68418213921 31253.928932778967 32477.21683738074 31083.135417807083 31458.217398664518 1.016214354106725 0.947466098442031 0.9936197491644574 1.0319576566507869 0.9382985649548408 0.9691483637736483 1.0385103443123298 0.9935060380791245 1.032392154514117 0.9880768202436875 1.0 14.941149301321161 -7.750149239117706 24.99953767331356 1.0152866818783794 0.9818843823744766 0.17438482457618165 0.029155602155758117 238.3026108531456 527667.5325818532 0.004252789746866647 0.006277255041706986 1.77766843461115e-08 7.750149239117706 -0.03340229950390283 KDNQESS(ph)DAELSSSEYIK ddPTM_A549_MK2206_60min_R1 1 KDNQESSDAELSSSEYIK 18 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KDNQES(0.154)S(0.846)DAELSSSEYIK 115.66 2.231e-10 11849000.0 5992.0 7579.5 6276.7 6159.5 8713.7 6733.7 6272.0 5905.1 10559.0 8862.0 10970.0 True False 7003.303109665112 7965.264175337961 7166.830442030557 7668.577776510466 7431.92627296859 7446.255664531693 7411.541213916992 6742.166008610301 8167.403359258166 6860.068045073698 8245.846243402271 0.8493128422408613 0.9659729202095162 0.8691443219384469 0.9299928170072667 0.9012933364983707 0.9030311073881164 0.8988211755521358 0.8176439154446875 0.9904869819508375 0.8319422703961559 1.0 13.0094518448513 -8.87061934105402 9.988461588556666 0.9957840222475574 0.8958388123214023 0.0 0.061816969984754146 0.1379010778513412 11.8276426573932 0.00591823981540441 0.006294666160942175 1.347040517268232e-09 8.87061934105402 -0.09994520992615508 KDNS(ph)ILEIR ddPTM_A549_MK2206_60min_R1 4 KDNSILEIR 9 1 A0A6E1VY70;Q9NZU1;Q9NZU0 A0A6E1VY70 FLRT1;FLRT3 Leucine-rich repeat transmembrane protein FLRT1;Leucine-rich repeat transmembrane protein FLRT3 1 KDNS(1)ILEIR;KDNS(1)ILEIR;KDNS(1)ILEIR;KDNS(1)ILEIR 109.0 0.00017616 38248800.0 8505.2 7329.3 6887.3 6235.9 8667.0 8182.900000000001 7294.9 7394.2 10693.6 11069.599999999999 10781.7 True False 9940.669827824397 7702.330064028571 7864.022703553942 7763.695779940185 7392.095781105471 9048.809046630595 8620.28890328493 8442.350493787791 8271.516674170192 8568.969671828912 8104.306330217896 1.226591076741435 0.950399670272765 0.9703511174339465 0.9579716589675661 0.9121194930086909 1.1165433138788208 1.06366770356929 1.0417116715232562 1.0206322832749832 1.0573353625440418 1.0 12.98447299146819 -5.252164997250969 24.9129937470767 1.0073756241283456 1.2265911977152606 0.5503213687575068 0.056506653955468236 665.6393592315065 1788012.4908980324 0.0074845446792858 0.13095871519532795 5.595449786617528e-06 5.252164997250969 0.219215573586915 KDNS(ph)ILEIR ddPTM_A549_PD325901_60min_R1 2 KDNSILEIR 9 1 A0A6E1VY70;Q9NZU1;Q9NZU0 A0A6E1VY70 FLRT1;FLRT3 Leucine-rich repeat transmembrane protein FLRT1;Leucine-rich repeat transmembrane protein FLRT3 1 KDNS(1)ILEIR;KDNS(1)ILEIR 96.734 0.00036928 70748000.0 4449.4 4653.1 4762.2 4489.700000000001 5079.2 4576.0 4284.4 4617.1 4783.1 5480.7 5829.8 True False 4901.0998125248425 5045.233067055868 5085.391529434954 4767.018572151493 4722.454514288754 4538.734573167963 4447.445186513637 4525.0083184551195 4582.082940678302 5134.647666657884 5112.771558147047 0.9585994126248587 0.9867902388512629 0.9946447776121615 0.932374646106649 0.9236584229474648 0.8877248908051891 0.8698697244602622 0.8850401914094237 0.896203338750172 1.0042787181594253 1.0 12.319889851604014 -6.273286963776294 22.19172996512302 0.9320349402704476 0.9806893497993919 0.23765527808150622 0.0425856784185614 235.4149430005197 440958.8934559503 0.007311450658788285 0.01715795568988171 5.3298260631672e-07 6.273286963776294 0.04865440952894429 KDPAFGGKHEAPS(ph)SPISGQPCGDDQNASPSK ddPTM_A549_PD325901_60min_R1 1 KDPAFGGKHEAPSSPISGQPCGDDQNASPSK 31 2 O75376-2;O75376;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 KDPAFGGKHEAPS(0.493)S(0.493)PIS(0.013)GQPCGDDQNASPSK 52.155 0.0018149999999999998 2827700.0 409.88 321.56 320.73 415.07 489.18 443.63 308.33 411.12 546.38 474.77 368.5 True False 451.4907158622917 348.658989714918 342.49666650616774 440.70793120763494 454.8216843793851 440.0172243650578 320.06366687464975 402.91988908259924 523.4175486876316 444.7929411752449 323.1768361139639 1.3970392225236086 1.078848948171422 1.0597809874758195 1.3636742549587475 1.407346175698677 1.3615370137787097 0.990366979029969 1.2467474275925985 1.6196010672715897 1.376314424398891 1.0 8.336179985571345 -6.2721456112921485 24.41107052186099 1.2904970034754015 1.1685856352842483 0.07045873477555442 0.18785685755782341 1411.6777181075822 3218742.935258456 0.03485189501647565 0.08177194958367619 5.34385159423561e-07 6.2721456112921485 -0.12191136819115322 KDPEDTGAEKSPT(ph)TSADLK ddPTM_A549_MK2206_60min_R1 1 KDPEDTGAEKSPTTSADLK 19 2 H7C1E7;G3XAF7;O75363 H7C1E7 BCAS1 Breast carcinoma-amplified sequence 1 1 KDPEDT(0.017)GAEKS(0.432)PT(0.446)T(0.048)S(0.057)ADLK 58.158 0.0018578 6626000.0 1069.2 1313.5 1285.7 1153.2 1667.4 1195.6 1834.3 1443.2 1778.4 1974.1 1807.8 True False 1249.6548205697493 1380.3515395878912 1468.0315929260098 1435.734051769115 1422.1276687914233 1322.1175984249517 2167.5685664362154 1647.7780196146355 1375.5952395212355 1528.1494389280062 1358.8733672582155 0.9196256624641667 1.015805867454016 1.0803299470708163 1.0565620655778842 1.0465490773881567 0.9729512920637885 1.5951218256706994 1.212606015628476 1.0123056884224315 1.1245708950874043 1.0 10.408195302989002 -5.345307844009831 2.3766235046562922 1.0666475987758497 0.8990090265371168 0.0465580192262004 0.17082005138634826 1.2009656089861587 9.203200668959235 0.024990770217884494 0.3805669419580867 4.5153576564090285e-06 5.345307844009831 -0.1676385722387329 KDPEDTGAEKSPT(ph)TSADLK ddPTM_A549_PD325901_60min_R1 1 KDPEDTGAEKSPTTSADLK 19 2 H7C1E7;G3XAF7;O75363 H7C1E7 BCAS1 Breast carcinoma-amplified sequence 1 1 KDPEDTGAEKS(0.218)PT(0.641)T(0.118)S(0.022)ADLK 124.0 6.0292e-15 21451000.0 4547.0 4994.2 5514.5 5313.1 6494.1 5080.4 5381.9 6018.3 6056.2 5968.5 8115.6 True False 5008.608092675521 5415.078761146425 5888.747131382352 5641.278120074407 6037.976819428763 5039.026906801253 5586.711149588683 5898.260285234982 5801.67897500281 5591.647891409418 7117.43264902709 0.7037099386335841 0.76081910826183 0.8273695617179192 0.7926001408451031 0.8483363478338103 0.7079837850646972 0.7849334760269706 0.8287061607869571 0.8151364770267078 0.7856270887471991 1.0 12.797141220732986 -10.74233451693571 0.3838463455450734 1.0739189209517523 0.7701383340067168 0.0 0.07664782318267603 0.83785744304908 0.1541501999123397 0.10431491911104729 0.013930620379886398 1.809945438381814e-11 10.74233451693571 -0.3037805869450355 KDPFS(ph)PDK ddPTM_A549_MK2206_60min_R1 2 KDPFSPDK 8 1 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 KDPFS(1)PDK;KDPFS(1)PDK 65.574 0.0037167000000000003 13827100.0 3359.8 3503.0 3215.2 2724.5 3488.0 2610.0 2704.3 3384.7 3522.0 4820.1 4256.1 True False 3926.8521007765094 3681.2877374772597 3671.1637066000685 3392.002622307454 2974.9198205256616 2886.188467622217 3195.6363049738084 3864.4915902090193 2724.2726234782886 3731.2360622951637 3199.192907615717 1.2274508646942142 1.1506926414827658 1.1475280836803619 1.0602682364770037 0.9298969791549079 0.9021614360145682 0.9988882812807436 1.2079582887951366 0.8515499696792665 1.1663054307894067 1.0 11.6434922725735 -6.410923849615945 2.022233782751376 0.9528562452735939 1.1830456892528127 0.21860820878601472 0.10979970952851566 0.21739599210155972 1.7223826284487294 0.014491462970270595 0.04182518141560449 3.8821843130622845e-07 6.410923849615945 0.2301894439792188 KDPFS(ph)PDK ddPTM_A549_PD325901_60min_R1 2 KDPFSPDK 8 1 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 KDPFS(1)PDK;KDPFS(1)PDK 56.225 0.0080408 24800000.0 4123.799999999999 4137.3 5014.4 4029.0 5326.6 3936.8 3782.6 3967.0 4289.0 4516.4 5436.9 True False 4542.445140218892 4485.964790855615 5354.707338036756 4277.862179477105 4952.477991772416 3904.7400060418786 3926.54891291814 3887.8750729487047 4108.748245399268 4231.233733226355 4768.195767348738 0.9526549164202271 0.9408096919120308 1.1230049266651936 0.8971658019519041 1.038648208549991 0.8189135254849306 0.8234873533939276 0.8153765622568978 0.8616987317372368 0.88738674745711 1.0 12.219227754267784 -7.243531531576321 24.708889953066386 0.906724442175745 0.9898794993407728 0.32418916727218183 0.07779653953912612 1034.7254338608357 1427693.7616766852 0.01337250727604671 0.023130473416181813 5.707796337043766e-08 7.243531531576321 0.0831550571650278 KDPFS(ph)PDKK ddPTM_A549_MK2206_60min_R1 2 KDPFSPDKK 9 2 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 KDPFS(1)PDKK;KDPFS(1)PDKK 45.915 0.0086444 15703100.0 6746.4 6463.9 5675.1 5449.5 7235.1 6327.1 5944.5 6692.8 8737.599999999999 7890.6 8404.8 True False 7885.027386355931 6792.884900450834 6479.914515839149 6784.627744637352 6170.826374279017 6996.629522410931 7024.538703145664 7641.524895840377 6758.54755108004 6108.107979740299 6317.6561993206415 1.2480937768034661 1.0752223112712742 1.0256833090309594 1.0739153145698124 0.9767588136471539 1.1074723444373724 1.1118899923520744 1.209550607812767 1.0697871707242963 0.966831335392566 1.0 12.625173713828097 -9.88873906181871 1.1363250178938493 1.0112868862063344 1.0948122950135493 0.25235953181081394 0.07363302453135889 0.5340566812108629 1.3971041415338743 0.02278898043433963 0.013838022429102126 1.2919953130567446e-10 9.88873906181871 0.08352540880721482 KDPFS(ph)PDKK ddPTM_A549_PD325901_60min_R1 1 KDPFSPDKK 9 2 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 KDPFS(1)PDKK 44.61600000000001 0.011406999999999999 8293100.0 4575.3 4433.6 4905.4 4486.6 5819.8 4652.2 4169.7 4196.7 6005.2 5141.6 5016.2 True False 5039.781087842162 4807.235031720553 5238.309942566505 4763.727092192098 5411.03732522005 4614.314025631997 4328.380215247392 4112.993526252539 5752.822327645531 4816.958498529056 4399.239200311708 1.1456028777623795 1.0927423613110048 1.1907308750557015 1.082852483187221 1.2299938873150271 1.0488890954838395 0.9838929001498041 0.9349329143005255 1.3076857305776677 1.0949526223051818 1.0 12.103038331857253 -3.9580844311678596 13.959358913568854 1.1210483815753038 1.1192606171791075 0.0 0.10804570120097778 0.0 0.0 0.017190133153239237 0.0 0.00011013251801560949 3.9580844311678596 -0.001787764396196323 KDPSGASNPSADS(ph)PLHR ddPTM_A549_PD325901_60min_R1 1 KDPSGASNPSADSPLHR 17 1 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 KDPSGASNPS(0.001)ADS(0.999)PLHR 150.26 4.5096e-17 27657000.0 1895.9 2285.5 2149.4 2569.9 2851.1 2684.4 2218.8 2588.2 2947.3 2841.2 2936.6 True False 2088.3703723121885 2478.1071059629485 2295.2712093921914 2728.6368863336334 2650.848571761038 2662.5391364099833 2303.2376481739484 2536.576320596378 2823.4352305118355 2661.8061471177757 2575.416816641156 0.8108863617019592 0.9622159372224965 0.8912231971777179 1.0594933094722532 1.0292891444338161 1.0338284347628248 0.8943164591034308 0.984918753425151 1.0963022421334283 1.033543824796985 1.0 11.330590227884874 -3.851919344096596 0.5285335650435854 1.033649656130191 1.225291554408352e-13 0.48500662292581287 0.05829206148545541 9.23488195176314 0.5565828440181234 0.011666124901399908 8.284476153898867 0.0001406308675420994 3.851919344096596 -1.0336496561300685 KDPSLPAASSS(ph)SSSSK ddPTM_A549_PD325901_60min_R1 1 KDPSLPAASSSSSSSK 16 1 Q01831-2;Q01831 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 KDPSLPAAS(0.001)S(0.007)S(0.309)S(0.309)S(0.309)S(0.056)S(0.007)K 101.49 5.079999999999999e-07 3210200.0 1851.3 1069.5 1245.5 1302.7 1572.3 1795.7 1330.9 1194.8 1693.6 1611.8 1612.5 True False 2039.242613144972 1159.630518410577 1330.0271197999314 1383.1648203536413 1461.8670721405342 1781.076414562437 1381.5481277964248 1170.9687766975321 1622.4238816526463 1510.0306729284912 1414.1727224796923 1.4420039226674135 0.8200062835162127 0.9404983554397689 0.9780734689383063 1.0337259720136673 1.2594475810842927 0.9769302616542753 0.8280238743710794 1.147260059441533 1.0677837642637569 1.0 10.465742621674254 -7.010173129704563 24.638085919922382 1.0588402715899807 1.0196281215014684 0.0 0.17524722244595747 2369.065221104749 5737620.5751676755 0.02459339528443779 0.044591279526579125 9.768477270071792e-08 7.010173129704563 -0.03921215008851231 KDPSLPAASSSS(ph)SSSK ddPTM_A549_PD325901_60min_R1 1 KDPSLPAASSSSSSSK 16 1 Q01831-2;Q01831 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 KDPSLPAASS(0.002)S(0.027)S(0.42)S(0.42)S(0.105)S(0.027)K 111.4 1.6324000000000002e-07 3113100.0 1604.1 1651.9 1726.5 1474.4 1711.0 1727.0 1654.2 1825.0 1751.6 2018.9 2143.6 True False 1766.9470511239936 1791.1114103435536 1843.6706722879014 1565.4703393946486 1590.825262629559 1712.9358845850252 1717.151486212972 1788.5989433151954 1677.9863433530786 1891.42630945237 1879.9507893999794 0.9398900551476387 0.9527437741682694 0.9807015602128302 0.8327187861626405 0.8462058004918841 0.9111599592092194 0.9134023591974088 0.9514073205533531 0.8925692910763044 1.0061041598094456 1.0 10.876479182300205 -10.85556716819775 0.8758725015720259 1.0055033872469765 0.9116579946962863 0.39625634638089735 0.042462742568606555 0.6466285495600593 0.7914742893984573 0.04215774987268073 0.00811437263083858 1.3945459597977849e-11 10.85556716819775 -0.09384539255069024 KDQSDET(ph)SEDDKK ddPTM_A549_MK2206_60min_R1 2 KDQSDETSEDDKK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KDQSDET(0.5)S(0.5)EDDKK;KDQSDET(0.566)S(0.434)EDDKK 61.097 0.014508000000000002 5911900.0 3522.8 3287.7 2628.2 1757.6 602.4000000000001 774.76 498.68 383.46000000000004 702.33 4056.7 4048.2 True False 4117.362515809124 3455.029887097912 3000.9182799472164 2188.2120789016626 513.7877579944549 856.7445889559342 589.2837009815255 437.81662929699866 543.2533763905471 3140.2886524994906 3042.9202153638175 1.3530957844443001 1.1354322961388659 0.9861968331589729 0.7191158242839554 0.16884693703118514 0.28155341853204 0.19365729604286375 0.14388041693845477 0.1785302728765745 1.0319983536354507 1.0 11.571240791893512 -6.162197974949726 1.9405446400114157 0.48502938804834894 1.2489717175200221 0.5198844981055104 0.3077561900281262 0.2751636082912514 1.9670839125532562 0.05447195477521075 0.19869250705064026 6.883384428658101e-07 6.162197974949726 0.7639423294716732 KDQSDET(ph)SEDDKK ddPTM_A549_PD325901_60min_R1 1 KDQSDETSEDDKK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KDQSDET(0.5)S(0.5)EDDKK 83.10600000000001 0.00089672 12362000.0 4687.2 5163.2 4463.1 4680.2 5310.8 4457.8 3890.6 3994.7 4316.9 5806.8 6609.0 True False 5163.041093465731 5598.320984251979 4765.992804800543 4969.285324494598 4937.787729265379 4421.497154778878 4038.6589120180083 3915.022574718472 4135.475705424134 5440.157657005314 5796.134897902811 0.8907731073225799 0.965871409631545 0.8222708561398391 0.8573446636469093 0.8519104224182216 0.7628354468386663 0.6967848373369119 0.6754540126619597 0.7134885192062135 0.9385836859962837 1.0 12.500875456898314 -5.773082462657563 24.441109488408063 0.8281153822687153 0.9283222545823718 0.1591935081381931 0.09722334239313564 288.0456280822493 604670.7949889761 0.017679151627896194 0.055662413790000344 1.686232817678575e-06 5.773082462657563 0.10020687231365655 KDQSDET(ph)SEDDKKQSK ddPTM_A549_MK2206_60min_R1 2 KDQSDETSEDDKKQSK 16 3 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 1 KDQS(0.001)DET(0.5)S(0.5)EDDKKQSK;KDQS(0.002)DET(0.497)S(0.497)EDDKKQS(0.004)K 60.034 0.0019165 10007900.0 2825.3999999999996 3014.9 2996.8 2232.2 1032.83 754.3499999999999 490.49 740.78 1041.63 5587.1 4804.9 True False 3302.2584456021077 3168.3455323209228 3421.7913025438784 2779.089100207264 880.9020751816283 834.1748163029962 579.6056839946025 845.787833543604 805.7024681413093 4324.970229590527 3611.710721506253 0.914319750454685 0.8772423310246658 0.9474156615502226 0.7694661379326231 0.24390161425061496 0.23096390619985926 0.16047954243491563 0.2341792847658826 0.223080564936633 1.1974852260002737 1.0 11.818466630038643 -4.245479823876418 15.12007899770031 0.5825441666594992 0.8387176401380415 0.0 0.37952280243302655 0.0 0.0 0.0531780364473106 0.0 5.682247891029154e-05 4.245479823876418 0.25617347347854236 KDQSDET(ph)SEDDKKQSK ddPTM_A549_PD325901_60min_R1 2 KDQSDETSEDDKKQSK 16 3 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 1 KDQS(0.002)DET(0.498)S(0.498)EDDKKQS(0.001)K;KDQSDET(0.5)S(0.5)EDDKKQSK 99.86 3.9850000000000003e-07 48286000.0 4513.47 4234.14 4492.8 4813.95 4474.7 5183.03 4220.1 4548.33 5248.73 5772.7 5269.209999999999 True False 4971.674151759001 4590.9658375156205 4797.708425401152 5111.296758226308 4160.412508876967 5140.821122108121 4380.698214827327 4457.609990054139 5028.144131050243 5408.210736824855 4621.130574274242 1.0758566701049803 0.9934724335800967 1.0382109633754815 1.1060706197485122 0.9003018724547441 1.1124596112317164 0.947971095907699 0.9646145934221338 1.088076618964597 1.1703219915343392 1.0 12.174030139411391 -11.414473122147747 2.2076542163851145 0.9996081331775721 1.0351934531716136 0.0 0.08341411298390758 1.0444451992627874 9.21566312218415 0.05138583345323182 0.009321587007124635 3.8505864465928116e-12 11.414473122147747 0.035585319994041464 KDQSDETS(ph)EDDKK ddPTM_A549_PD325901_60min_R1 1 KDQSDETSEDDKK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KDQSDET(0.162)S(0.838)EDDKK 79.97 0.00023669 12406000.0 2687.3 2282.7 2317.4 2001.5 2365.6 1695.8 1188.1 1597.6 2025.3 2492.0 2711.9 True False 2960.1127177142994 2475.071140136346 2474.6726996582606 2125.1281092636946 2199.4484168769627 1681.9899670406985 1233.3137956532662 1565.7346147070452 1940.1836841704678 2334.65469471262 2378.353492150498 1.2446058701886982 1.0406658002290468 1.0404982723660103 0.8935291226798091 0.9247777608063762 0.7072077269387949 0.5185578172982641 0.6583271241531528 0.8157675848328843 0.9816264497341959 1.0 11.215747441912033 -5.73130828924583 1.0758905100079788 0.8470633097640202 1.2609343948350482 0.4787154121290549 0.1416270131111484 0.8132978634192644 1.1996569321692485 0.02548233490657265 0.3155958127292789 1.856486137860734e-06 5.73130828924583 0.413871085071028 KDRDAS(ph)PSKEER ddPTM_A549_MK2206_60min_R1 2 KDRDASPSKEER 12 3 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 KDRDAS(0.99)PS(0.01)KEER;KDRDAS(0.999)PS(0.001)KEER 92.06299999999999 7.8976e-05 78782000.0 3653.8 3790.3 3960.9 3444.7 1422.26 979.29 1031.91 1070.62 1514.22 5003.6 5179.4 True False 4270.47211316662 3983.210080319745 4522.61517960693 4288.651654638462 1213.0474380564287 1082.9178177999079 1219.3946897406065 1222.3836636362394 1171.2515877124627 3873.2832848488792 3893.2120358320612 1.0969020114656896 1.0231166562877558 1.1616668031389028 1.1015715597216083 0.31158011094486276 0.27815536575789546 0.3132104489859865 0.3139781888029097 0.30084454094269275 0.994881154481245 1.0 11.926745204922177 -6.744656953959658 24.741191610240815 0.5571407420175376 1.0953255750671087 0.5491265115774784 0.25581394974596705 176.26823217803226 259858.59947120334 0.04602817644668293 0.09560576142888119 1.8002923914635366e-07 6.744656953959658 0.5381848330495711 KDRDAS(ph)PSKEER ddPTM_A549_PD325901_60min_R1 3 KDRDASPSKEER 12 3 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 KDRDAS(0.998)PS(0.002)KEER;KDRDAS(0.999)PS(0.001)KEER;KDRDAS(0.863)PS(0.137)KEER 87.38799999999999 4.9018000000000004e-05 246931000.0 9624.900000000001 8666.7 9243.1 8938.1 11165.099999999999 10494.4 10563.3 9656.5 11375.2 11468.0 10518.1 True False 10602.01276252311 9397.073224786294 9870.392349275588 9490.186137102082 10380.901893503966 10408.93708580723 10965.292161959553 9463.893532122298 10897.139902323559 10743.908522858881 9224.440379729394 1.1493393990405008 1.0187147228395836 1.0700261417446706 1.028808875816105 1.1253692870427006 1.1284085166489617 1.188721668802333 1.0259585560246125 1.1813334417847074 1.1647219864381693 1.0 13.17124567433064 -4.915580924053001 17.31997883836872 1.0872328610982822 2.9494193323464764 0.04957284182981203 0.0661111767222349 9506253.650358697 22001009.22486083 0.01018848730086616 674741425.0680773 1.2145602848794198e-05 4.915580924053001 1.8621864712481941 KDRDASPS(ph)KEER ddPTM_A549_PD325901_60min_R1 1 KDRDASPSKEER 12 3 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 KDRDAS(0.124)PS(0.876)KEER 70.96 0.00048323 47329000.0 2804.5 2942.2 3546.4 3404.3 3330.0 3461.5 3313.6 3874.5 3661.3 3739.8 3867.0 True False 3089.21077543622 3190.1495196517994 3787.08003023563 3614.5758792737397 3096.1122878763485 3433.310691656669 3439.7008612714926 3797.220058013548 3507.4282935137207 3503.6683897617413 3391.383514932695 0.9108998619100523 0.9406631557903031 1.1166770179664531 1.0658115967593462 0.9129348757649409 1.0123628532542437 1.0142470900522014 1.119666956359817 1.0342175333665644 1.0331088696794808 1.0 11.727658225559082 -7.669216808434173 4.1598337064845845 1.0258686363981468 0.9952413280930619 0.10003661949512166 0.06496368216167381 0.6558445121358109 21.108053563716453 0.010459074973259652 0.01562403422263718 2.1418210945375022e-08 7.669216808434173 -0.030627308305084977 KDREDS(ph)PER ddPTM_A549_MK2206_60min_R1 2 KDREDSPER 9 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 KDREDS(1)PER;KDREDS(1)PER 52.555 0.0077827 27017000.0 2978.9 3233.6 2299.8 1636.47 582.8199999999999 397.62 454.72 492.58000000000004 567.8 4380.0 3934.8 True False 3481.6654928874186 3398.1764281776977 2625.946221833427 2037.4052234639305 497.0879500569856 439.69588448120527 537.336738008982 562.4047234629828 439.1942065902818 3390.5549579578865 2957.6805650445986 1.1771607569916593 1.1489328727175976 0.8878396987383357 0.6888523553026791 0.16806681422322228 0.148662397717238 0.1816750410302945 0.1901505964199695 0.14849277903128097 1.1463560325037199 1.0 11.5302505317876 -6.162394015594746 2.0642434623651726 0.4675627649382259 1.1591473823948584 0.42191729901162023 0.3332609216878444 0.2945246150150818 2.3958117247222046 0.055569813067753826 0.1955944433646408 6.880277968271492e-07 6.162394015594746 0.6915846174566325 KDREDS(ph)PER ddPTM_A549_PD325901_60min_R1 2 KDREDSPER 9 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 KDREDS(1)PER;KDREDS(1)PER 136.99 1.4471e-05 107084000.0 6959.9 6604.8 5572.0 5859.200000000001 5781.6 5176.299999999999 4739.700000000001 5057.4 6148.0 6993.2 7781.1 True False 7666.463924392424 7161.4096755476185 5950.149427157945 6221.1094767913255 5375.520361437205 5134.145928996792 4920.071877163358 4956.526189546454 5889.62094024591 6551.648158533025 6824.074028456888 1.123443839035554 1.0494331752094153 0.8719350643538429 0.9116415576456005 0.7877289049064959 0.7523578887900435 0.7209874712153325 0.7263294871769235 0.8630652181798966 0.9600787053616612 1.0 12.736417581949642 -5.655883327407962 3.26894343375576 0.8787197360535024 1.1124269740402417 0.47760702000935296 0.09326377658643764 0.2143023534754019 4.325058915492403 0.016305254850010664 0.07971309455780254 2.2085979900208544e-06 5.655883327407962 0.2337072379867393 KDRHDT(ph)PDPS(ph)PR ddPTM_A549_MK2206_60min_R1 3 KDRHDTPDPSPR 12 2 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 KDRHDT(1)PDPS(1)PR;KDRHDT(1)PDPS(1)PR;KDRHDT(1)PDPS(1)PR 84.874 0.00059118 47962400.0 2839.87 2547.51 2492.45 1861.46 2221.11 2048.0699999999997 1888.85 2143.05 2304.79 3750.5 3688.5 True False 3319.170627844572 2677.167377705024 2845.916888689767 2317.517783564115 1894.3876612866259 2264.795408001162 2232.029595329579 2446.8339003153715 1782.7587449933353 2903.259445164625 2772.5436525787845 1.1971572114860525 0.9655997211134802 1.0264642311556527 0.8358814410040241 0.6832670279238444 0.8168655544502037 0.8050475934810024 0.8825231292713946 0.6430047524536411 1.047146522820032 1.0 11.436994459877983 -5.615726482367029 1.1371427921003676 0.8191950408038777 1.2227141369113323 0.41658547677228763 0.12046513049473426 0.7464153224880611 1.153190826618851 0.020257545757503118 0.30679438263140246 2.4225542853236974e-06 5.615726482367029 0.4035190961074546 KDRHDT(ph)PDPS(ph)PR ddPTM_A549_PD325901_60min_R1 3 KDRHDTPDPSPR 12 2 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 KDRHDT(1)PDPS(1)PR;KDRHDT(1)PDPS(1)PR;KDRHDT(1)PDPS(1)PR 92.211 0.00013221 130279000.0 6222.6 6137.6 6465.700000000001 5604.3 6942.4 6557.000000000001 5959.3 6039.2 6103.1 6840.299999999999 8952.8 True False 6854.31377116399 6654.837091909077 6904.501283412625 5950.464882711228 6454.78977397981 6503.601965966421 6186.084422554083 5918.743418339253 5846.607931101952 6408.402290627098 7851.662356475153 0.8729761240320448 0.847570462122703 0.8793680840998699 0.757860515716645 0.8220921227791511 0.8283089199070046 0.7878693888883936 0.7538204203926512 0.7446331318972649 0.8161841403358592 1.0 12.938782418862958 -10.874661569379803 1.1225129959668592 1.0000246295630697 0.80598178930139 0.03254968766358235 0.06877794391938331 0.22974535252585215 0.5138932747823702 0.03461182289406606 0.00835385502297584 1.3345610041422304e-11 10.874661569379803 -0.19404284026167973 KDRHDT(ph)PDPS(ph)PRR ddPTM_A549_MK2206_60min_R1 1 KDRHDTPDPSPRR 13 3 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 KDRHDT(1)PDPS(1)PRR 63.631 0.033578 7377200.0 135.87 210.0 217.04 0.0 297.46 138.41 251.92 110.19 192.62 301.11 370.59 True False 158.8015342974298 220.68810301747774 247.81953560602085 0.0 253.7040280428793 153.05645433087778 297.690603094702 125.80976994272224 148.99187755093357 233.0890418700228 278.56227523632174 0.5700755213989711 0.7922397346527066 0.8896378211865914 0.0 0.9107623343026128 0.549451479749117 1.0686680486155296 0.4516396552117115 0.5348602118665726 0.8367573881721021 1.0 8.121856081545076 -10.858773139184871 1.073002259135427 1.0027734477508912 0.6387778007585505 0.12292281572651331 0.2753926601149402 0.6690266573496516 1.3508257480784644 0.1846900920698147 0.04357476086434176 1.3842892962623865e-11 10.858773139184871 -0.36399564699234066 KDRHDT(ph)PDPS(ph)PRR ddPTM_A549_PD325901_60min_R1 2 KDRHDTPDPSPRR 13 3 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 KDRHDT(1)PDPS(1)PRR;KDRHDT(1)PDPS(1)PRR 65.23100000000001 0.029110000000000004 54480000.0 1688.4299999999998 1698.23 1881.96 1575.71 1910.0100000000002 1975.0900000000001 1731.98 1984.67 1748.5500000000002 1660.35 2050.4300000000003 True False 1859.838170643528 1841.3458020387043 2009.6811227448247 1673.0380280029462 1775.8574867767884 1959.0055218790023 1797.8914466758226 1945.0841999065058 1675.06452424642 1555.515217642896 1798.2401087466883 1.0342546368514556 1.0239710442906644 1.1175821921498035 0.9303752151146247 0.9875530404082135 1.0894015278328777 0.9998061092791949 1.0816598909375694 0.9315021481830269 0.8650208668335381 1.0 10.812369953217694 -8.76924644017222 24.9997228767095 0.9676537940345669 1.0314166710749344 0.31854638046928563 0.059843723220285604 187.1549259072135 599305.0094545742 0.009067757462411922 0.0097393493969829 1.701192893451591e-09 8.76924644017222 0.06376287704036754 KDRHDT(ph)PDPSPR ddPTM_A549_MK2206_60min_R1 2 KDRHDTPDPSPR 12 2 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 KDRHDT(0.993)PDPS(0.007)PR;KDRHDT(0.997)PDPS(0.003)PR 73.156 0.00052651 16745600.0 1039.99 954.25 793.49 1017.11 1148.18 1007.35 1026.29 903.3 1269.78 1374.67 1579.3400000000001 True False 1215.5148866856846 1002.817249068706 906.0188136197087 1266.301995659803 979.2842429848483 1113.9471083751885 1212.7536084870658 1031.3455412402302 982.1768574219934 1064.1310922502219 1187.1462904334503 1.0238964620290194 0.8447292950749632 0.7631905359270452 1.0666772965254783 0.8249061222499314 0.9383402175046721 1.021570482307 0.8687602779465923 0.8273427338625482 0.8963773890593439 1.0 10.21328201195739 -6.233916214158079 24.986483070077554 0.9233305539028169 0.8740178773390783 0.05723836258881454 0.09269324377569765 2065.7699219462506 1875376.0556134405 0.013532156774838827 0.035792597485847844 5.835576757134209e-07 6.233916214158079 -0.04931267656373861 KDRT(ph)PPPR ddPTM_A549_MK2206_60min_R1 4 KDRTPPPR 8 2 P62854 P62854 RPS26 40S ribosomal protein S26 1 KDRT(1)PPPR;KDRT(1)PPPR;KDRT(1)PPPR;KDRT(1)PPPR 94.69200000000001 0.00087348 187943000.0 14148.8 14884.499999999998 13166.7 8577.400000000001 6525.9 4783.78 4128.53 4700.82 6428.5 21505.199999999997 21028.1 True False 16536.771535051692 15642.057473160221 15033.936046184088 10678.863385054115 5565.948754807454 5289.996424383838 4878.63046044208 5367.17563065748 4972.4550142050475 16647.160383989947 15806.242423964206 1.0462177595087314 0.9896126513563362 0.9511391539453294 0.6756105023964232 0.3521361121457173 0.33467767243424995 0.3086521343646784 0.33956050316678565 0.314588052038617 1.0532016362567491 1.0 13.948206819944922 -6.295287288153993 3.2801452080634745 0.5688486788796547 1.006084376399458 0.38536840967572916 0.25437662123555715 0.25827435961008605 5.681177804271751 0.04401679522190078 0.11717642555221977 5.066554420753262e-07 6.295287288153993 0.4372356975198033 KDRT(ph)PPPR ddPTM_A549_PD325901_60min_R1 5 KDRTPPPR 8 2 P62854 P62854 RPS26 40S ribosomal protein S26 1 KDRT(1)PPPR;KDRT(1)PPPR;KDRT(1)PPPR;KDRT(1)PPPR;KDRT(1)PPPR 106.62 0.00065358 460031800.0 22981.71 24583.48 21286.78 22224.93 26424.68 21625.11 16796.22 18819.730000000003 24369.050000000003 26765.76 27851.15 True False 25314.7962809593 26655.216135330553 22731.428898606824 23597.713449621766 24568.701636997102 21449.00227394238 17435.409343344254 18444.355721357428 23344.90357415414 25075.765345726824 24425.635112986205 1.0364027860016776 1.091280370480887 0.9306381919429135 0.96610439566731 1.005857228413882 0.8781348847112983 0.7138160077595892 0.7551228713619507 0.955754209303754 1.0266167176301986 1.0 14.576108455046818 -5.767082210311684 24.916542469795207 0.9378605254861807 1.0638415920576694 0.22917200432141094 0.09825501203208348 158.1127724317803 698180.0409433673 0.015086326853020575 0.048882908233527596 1.7096916462595342e-06 5.767082210311684 0.12598106657148866 KDS(ph)AQDDQAK ddPTM_A549_MK2206_60min_R1 3 KDSAQDDQAK 10 1 Q13045-3;Q13045;Q13045-2;J3KS54 Q13045-3 FLII Protein flightless-1 homolog 1 KDS(1)AQDDQAK;KDS(1)AQDDQAK;KDS(1)AQDDQAK 126.71 1.9454e-06 25037000.0 9234.400000000001 7168.4 5296.700000000001 4494.0 1900.5500000000002 1530.49 1178.48 1705.1 2405.3 11855.9 13025.3 True False 10792.940960596059 7533.240941288038 6047.851705880994 5595.03020174333 1620.9816126433607 1692.4454359429603 1392.594561507797 1946.8031466497464 1860.5033904748238 9177.643955719846 9790.758530007985 1.1023600395736914 0.7694236272091877 0.6177102302487345 0.5714603403398171 0.16556241354284923 0.17286152352299716 0.14223561506900542 0.19884089069125052 0.19002648107115624 0.9373782355668373 1.0 13.25720492029175 -5.423671047600368 1.4113204871621945 0.4814428939417505 1.2372650918440131 0.32084628671153625 0.29578580102844587 1.1608762343669767 2.5462640873158 0.05443560963627334 1.13113995431278 3.7698923793323657e-06 5.423671047600368 0.7558221979022626 KDS(ph)AQDDQAK ddPTM_A549_PD325901_60min_R1 5 KDSAQDDQAK 10 1 Q13045-3;Q13045;Q13045-2;J3KS54 Q13045-3 FLII Protein flightless-1 homolog 1 KDS(1)AQDDQAK;KDS(1)AQDDQAK;KDS(1)AQDDQAK;KDS(1)AQDDQAK;KDS(1)AQDDQAK 115.91 3.547e-05 64183000.0 23308.299999999996 23422.7 21443.7 20748.899999999998 21759.7 18443.5 13400.8 16784.4 20970.9 25619.0 30654.999999999996 True False 25674.541457336436 25396.613130972808 22898.998433443438 22030.512428829097 20231.37373888978 18293.30225092293 13910.774777199125 16449.621974892932 20089.566001269188 24001.411967834098 26884.629338055795 0.954989601474384 0.9446517864028474 0.8517505726228999 0.8194463889314038 0.7525256712485828 0.6804372126874872 0.5174248304590948 0.6118597272832073 0.7472509941891576 0.8927559188573064 1.0 14.714493960672405 -5.8649258266884345 2.3478227659602844 0.8064897909974941 0.9577330074939259 0.18297202198111862 0.1310201595243393 0.5883988547237038 6.311915869873406 0.024302324298034455 0.11004052524074155 1.364816214139264e-06 5.8649258266884345 0.1512432164964318 KDS(ph)DDEKSDR ddPTM_A549_MK2206_60min_R1 3 KDSDDEKSDR 10 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 KDS(0.998)DDEKS(0.002)DR;KDS(0.914)DDEKS(0.086)DR;KDS(0.997)DDEKS(0.003)DR 88.507 0.00014427 41952000.0 11802.6 9114.55 7197.5 4827.33 1433.1 1028.98 1376.16 1175.9299999999998 1917.54 12611.099999999999 11712.3 True False 13794.590334134433 9578.44166360929 8218.213727996386 6010.026066707079 1222.292888416091 1137.8659806183555 1626.1904586964306 1342.6216786345883 1483.2202516821576 9762.243751210664 8803.812666964483 1.5668882171808807 1.0879879009183753 0.9334834848127217 0.6826617391870641 0.1388367670523744 0.12924695511617318 0.18471434141239335 0.1525045715332694 0.16847476289992047 1.1088654564223759 1.0 13.103912731650219 -5.773024084510602 1.3212520881892484 0.4709376741033644 1.5653017423085072 0.5296029970565184 0.33823997288914354 0.46400413444925986 1.2151036332780154 0.05812529386783144 0.5297870386946907 1.6864594974264608e-06 5.773024084510602 1.0943640682051428 KDS(ph)DDEKSDR ddPTM_A549_PD325901_60min_R1 4 KDSDDEKSDR 10 2 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 KDS(0.993)DDEKS(0.007)DR;KDS(0.999)DDEKS(0.001)DR;KDS(0.996)DDEKS(0.004)DR;KDS(0.972)DDEKS(0.028)DR 125.36 4.816600000000001e-06 182823000.0 28601.000000000004 29433.399999999998 25412.4 21686.5 27893.2 19741.600000000002 13916.0 19042.600000000002 24208.300000000003 29099.699999999997 34168.8 True False 31504.552465056633 31913.855914526295 27137.038281175242 23026.025851385017 25934.07785831607 19580.830954906625 14445.580995127393 18662.780404369296 23190.909337630936 27262.339975814135 29966.254213869222 1.0513343523087195 1.064993164869958 0.9055866004305423 0.7683985354675369 0.8654427634907086 0.6534293814354705 0.4820616181131365 0.6227932350561065 0.7739008409965878 0.9097680271028455 1.0 14.871051137581347 -5.905324152505568 3.247460934353008 0.8167847189487549 1.0605488272446024 0.35198289923148796 0.14327661759639562 0.2862950267803677 5.936425751317619 0.02513357890800067 0.09189597210223051 1.2435860666652575e-06 5.905324152505568 0.2437641082958475 KDS(ph)EEEKEGNEEEKDSR ddPTM_A549_PD325901_60min_R1 1 KDSEEEKEGNEEEKDSR 17 3 A0A0C4DFM7;Q5TAX3;H0YDJ1;H0YEE8 A0A0C4DFM7 ZCCHC11 Terminal uridylyltransferase 4 1 KDS(1)EEEKEGNEEEKDSR 42.325 0.023025 7944200.0 2525.3 2465.7 2561.6 2818.5 3376.1 2494.8 2513.5 2622.0 2768.4 3030.1 3336.4 True False 2781.6665969723977 2673.493192374902 2735.445580152152 2992.5923437220704 3138.9743829127137 2474.483175948305 2609.152617939975 2569.702153080793 2652.053775370329 2838.7789688799007 2926.0439511821673 0.950657831318139 0.9136886653034617 0.934861412128478 1.0227434699034568 1.0727707564489997 0.8456753272446831 0.8916997357082885 0.8782172092946837 0.9063615651770568 0.970176462227435 1.0 11.514735724567856 -4.790331503483807 16.818679664455225 0.9470271768826386 13.239200899443833 0.0 0.06457392093332252 7302.5257062572855 579371.1874767444 0.009316494556335398 37997.718256401226 1.6205726177701946e-05 4.790331503483807 12.292173722561195 KDS(ph)EEEVSLLGSQDIEEGNHQVEDGCR ddPTM_A549_MK2206_60min_R1 4 KDSEEEVSLLGSQDIEEGNHQVEDGCR 27 1 Q9Y487 Q9Y487 ATP6V0A2 V-type proton ATPase 116 kDa subunit a isoform 2 1 KDS(1)EEEVSLLGSQDIEEGNHQVEDGCR;KDS(1)EEEVSLLGSQDIEEGNHQVEDGCR;KDS(0.86)EEEVS(0.14)LLGSQDIEEGNHQVEDGCR;KDS(1)EEEVSLLGSQDIEEGNHQVEDGCR 227.4 3.531699999999999e-96 128496000.0 4280.98 4819.67 4735.37 4342.37 6466.7 4956.900000000001 4049.0699999999997 4956.6 6664.0 7133.0 7728.6 True False 5003.504764087814 5064.9706165249845 5406.916671225039 5406.250844936395 5515.456996385691 5481.435867876083 4784.733606988981 5659.213228950875 5154.614640221274 5521.650345916349 5809.375321491232 0.8612810306088889 0.8718614887538092 0.9307225600010149 0.9306079476284624 0.9494062082685176 0.9435499626953059 0.8236227377646462 0.9741517660281225 0.8872924118282163 0.9504723038791327 1.0 12.504167324533052 -10.867013368528143 0.8860581257071116 1.0056941480378212 0.9082521658252849 0.2291181970009598 0.04432142735894613 0.5617464079281379 0.703684154120919 0.03839529199735898 0.0073510820846150685 1.3582716353903371e-11 10.867013368528143 -0.0974419822125363 KDS(ph)EEEVSLLGSQDIEEGNHQVEDGCR ddPTM_A549_PD325901_60min_R1 4 KDSEEEVSLLGSQDIEEGNHQVEDGCR 27 1 Q9Y487 Q9Y487 ATP6V0A2 V-type proton ATPase 116 kDa subunit a isoform 2 1 KDS(1)EEEVSLLGSQDIEEGNHQVEDGCR;KDS(0.942)EEEVS(0.058)LLGSQDIEEGNHQVEDGCR;KDS(1)EEEVSLLGSQDIEEGNHQVEDGCR;KDS(0.999)EEEVS(0.001)LLGSQDIEEGNHQVEDGCR 345.79 4.636999999999998e-257 243693000.0 10935.199999999999 10389.099999999999 10179.8 11318.2 11752.6 11476.1 11642.4 12487.8 9368.300000000001 10680.4 12333.800000000001 True False 12045.333453931238 11264.625917549618 10870.662444110265 12017.299508502798 10927.137920268933 11382.64244648883 12085.457902965736 12238.721032510422 8974.582930140814 10006.03772127153 10816.82079040002 1.1135742828078958 1.0413989596228708 1.0049775858132022 1.1109825836412313 1.0101986648393788 1.0523094231708987 1.117283732174951 1.1314526948040358 0.8296876784818141 0.9250442357473406 1.0 13.400988913474434 -8.754897949289212 24.999778054476458 0.9195747357711386 1.0694561587737637 0.6108597029856375 0.05487997246184657 96.06768108515215 367147.3391899091 0.012141515355187654 0.013609536741465124 1.7583367401688504e-09 8.754897949289212 0.14988142300262508 KDS(ph)EGYSESPDLEFEYADTDK ddPTM_A549_MK2206_60min_R1 2 KDSEGYSESPDLEFEYADTDK 21 1 Q5VSL9;Q5VSL9-4 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 KDS(0.968)EGYS(0.013)ES(0.019)PDLEFEYADTDK;KDS(0.987)EGYS(0.013)ESPDLEFEYADTDK 194.19 1.2849e-46 23779000.0 3777.6 4244.5 3710.3999999999996 3491.2 5979.6 4185.2 4073.6 4357.0 6087.6 5919.200000000001 5565.5 True False 4415.1665265472175 4460.526920274686 4236.590512866659 4346.544156725923 5100.008761128225 4628.075086089082 4813.720390467518 4974.618092752888 4708.768319899615 4582.04860893706 4183.43275001416 1.0553932118383578 1.0662360761648644 1.012706732970028 1.0389898479212343 1.2190966285070468 1.1062864787472482 1.1506627877432056 1.1891234758670495 1.1255752395885117 1.095284395075205 1.0 12.030471528163263 KDS(ph)EGYSESPDLEFEYADTDK ddPTM_A549_PD325901_60min_R1 2 KDSEGYSESPDLEFEYADTDK 21 1 Q5VSL9;Q5VSL9-4 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 KDS(0.992)EGYS(0.008)ESPDLEFEYADTDK;KDS(0.927)EGYS(0.06)ES(0.013)PDLEFEYADTDK 206.0 1.3756999999999997e-56 37642000.0 4843.7 4896.6 4464.6 4579.4 5188.6 4243.9 4644.8 4616.1 4490.5 5350.9 6048.9 True False 5335.4288582565205 5309.253666619196 4767.594603820778 4862.259137428009 4824.170635698262 4209.339085460559 4821.560405732085 4524.028264239603 4301.779901134396 5013.0432608096935 5304.923647136378 1.0057503581859484 1.0008162265417628 0.8987112578697238 0.916555913119066 0.9093760733582605 0.793477788833545 0.9088840342376624 0.8527979977019451 0.8109032640755378 0.9449793426368647 1.0 12.373116271487252 -5.759001488131093 6.466657851886069 0.8968501034355763 1.004359130780988 0.37062921696539897 0.05531955735970717 0.14842350027795453 27.152600521224322 0.010188126596442984 0.03633317411969818 1.741800905016159e-06 5.759001488131093 0.10750902734541179 KDS(ph)FQENEDGYR ddPTM_A549_MK2206_60min_R1 4 KDSFQENEDGYR 12 1 Q5VYS8-4;Q5VYS8-6;Q5VYS8;Q5VYS8-5;Q5VYS8-3;Q5VYS8-2 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 KDS(1)FQENEDGYR;KDS(1)FQENEDGYR;KDS(1)FQENEDGYR;KDS(1)FQENEDGYR 139.21 7.7715e-09 60471000.0 9068.3 20200.5 12700.400000000001 11906.9 18521.199999999997 15984.7 15889.600000000002 19962.7 21557.5 19965.800000000003 19096.300000000003 True False 10598.807341351165 21228.619166688393 14501.507694483553 14824.091034521049 15796.756014885272 17676.190344214894 18776.534641686147 22792.473858204754 16674.760670253607 15455.51191314968 14354.161678931896 0.7383787070552092 1.478917378912234 1.0102650380319962 1.0327381957999597 1.1005000757425438 1.2314331369249418 1.308089950613077 1.5878652036961562 1.1616673298816005 1.0767268934858296 1.0 13.809181455342594 -4.354688332333781 16.508936658777184 1.1341821173223448 1.1029505712526781 0.0 0.22761110179438576 0.0 0.0 0.02906551627366202 0.0 4.418874502865942e-05 4.354688332333781 -0.031231546069666605 KDS(ph)FQENEDGYR ddPTM_A549_PD325901_60min_R1 2 KDSFQENEDGYR 12 1 Q5VYS8-4;Q5VYS8-6;Q5VYS8;Q5VYS8-5;Q5VYS8-3;Q5VYS8-2 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 KDS(1)FQENEDGYR;KDS(1)FQENEDGYR 163.64 1.6476e-28 27849000.0 6381.3 6670.7 6917.2 6363.3 7574.4 7023.9 7301.0 7245.6 7953.9 7920.7 8027.6 True False 7029.124878335231 7232.863299823688 7386.642788502682 6756.346588897157 7042.400274261445 6966.699687166623 7578.843550260496 7101.0808239367625 7619.625243432327 7420.585650244878 7040.256091149136 0.99841891933052 1.0273579833149384 1.0492008661146597 0.9596734126463233 1.0003045603859502 0.9895520272231308 1.0765011175926484 1.0086395625386544 1.082293761019796 1.0540221199586595 1.0 12.781412192887041 -7.73640918780127 24.981650490525023 1.03966704118889 1.0050027331681126 0.28598051472018626 0.031229592809503156 316.8877164203494 316272.321699394 0.005704580703652223 0.0084594228484552 1.8348087906911736e-08 7.73640918780127 -0.03466430802077736 KDS(ph)GSPNPAR ddPTM_A549_PD325901_60min_R1 1 KDSGSPNPAR 10 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 KDS(0.579)GS(0.421)PNPAR 59.185 0.0040583 11661000.0 3270.0 3156.4 2565.9 3190.2 2383.8 2125.8 2392.7 3308.5 2489.2 3249.8 4629.0 True False 3601.967992753231 3422.4009053867644 2740.0374040101515 3387.251408530119 2216.370111663555 2108.488189606744 2483.755507835679 3242.5093720319614 2384.5875804261727 3044.607073385664 4059.6623456486764 0.8872580244546638 0.843025999207802 0.6749421924084508 0.8343677675954315 0.5459493728682034 0.5193752608186033 0.6118133224793626 0.7987140545093423 0.5873856930446637 0.7499655917564196 1.0 11.987144023768165 -10.898963672294565 1.0929368522799192 1.0039331270170444 0.6895213197445441 0.09944339388587786 0.14074036030520842 0.3914014530610546 0.812919287392866 0.09572454859850067 0.021693572297746794 1.2619330878917702e-11 10.898963672294565 -0.3144118072725003 KDS(ph)ISEDEMVLR ddPTM_A549_MK2206_60min_R1 2 KDSISEDEMVLR 12 1 Q8N5D0-5;Q8N5D0-3;Q8N5D0-6;Q8N5D0-2;Q8N5D0-4;Q8N5D0 Q8N5D0-5 WDTC1 WD and tetratricopeptide repeats protein 1 1 KDS(0.994)IS(0.006)EDEMVLR;KDS(0.942)IS(0.058)EDEMVLR 122.14 4.7188e-06 16468400.0 3838.2999999999997 3778.5 3075.2 3200.9 5061.799999999999 4316.5 3533.3999999999996 3651.6000000000004 6400.1 5468.6 5671.8 True False 4486.1112025747 3970.8095107216195 3511.309601435844 3985.120643693862 4317.215925325913 4773.269164939195 4175.373042929579 4169.225482555989 4950.487568859569 4233.239461892352 4263.33552628341 1.0522538455905899 0.9313856454040805 0.823606206874562 0.9347424379633371 1.0126380855342796 1.1196090796776492 0.9793676845719641 0.9779257243190845 1.161177096744996 0.9929407234768372 1.0 12.057766885133235 -6.890009462526665 3.5347845169867185 1.0644570354154983 0.9269447362658607 0.2512581902477905 0.07570515813357902 0.20195337220022466 4.917540419693654 0.012372098108981525 0.02448153131214836 1.2882214832661968e-07 6.890009462526665 -0.13751229914963758 KDS(ph)ISEDEMVLR ddPTM_A549_PD325901_60min_R1 1 KDSISEDEMVLR 12 1 Q8N5D0-5;Q8N5D0-3;Q8N5D0-6;Q8N5D0-2;Q8N5D0-4;Q8N5D0 Q8N5D0-5 WDTC1 WD and tetratricopeptide repeats protein 1 1 KDS(0.794)IS(0.206)EDEMVLR 75.46300000000001 0.00051831 11242000.0 1561.1 1362.7 1447.9 1460.1 1375.5 1404.8 1354.5 1686.9 1604.3 1506.8 1877.4 True False 1719.58172277892 1477.539511396065 1546.1632009300042 1550.2870608723047 1278.8896252173918 1393.3597745599561 1406.0462387108396 1653.253456152551 1536.8768501035322 1411.6603908479033 1646.491701819147 1.0443913691633055 0.8973865521238807 0.9390652860392229 0.9415699205525607 0.7767361498417481 0.8462598220328017 0.8539649711913834 1.0041067649025703 0.9334252024504555 0.8573747376243759 1.0 10.685179525550991 -9.540573164759518 0.6970190876794632 0.9906845578681508 0.9041786613678973 0.0 0.0801502120215713 0.776749886401047 0.8192055567570553 0.028178210548071386 0.016798318017390772 2.8802277824424435e-10 9.540573164759518 -0.08650589650025353 KDS(ph)LESDSSTAIIPHELIR ddPTM_A549_PD325901_60min_R1 2 KDSLESDSSTAIIPHELIR 19 1 Q9UMX1-2;Q9UMX1-3;Q9UMX1 Q9UMX1-2 SUFU Suppressor of fused homolog 1 KDS(0.936)LES(0.063)DS(0.002)STAIIPHELIR;KDS(0.836)LES(0.127)DS(0.026)S(0.005)T(0.005)AIIPHELIR 114.39 1.5553e-14 7520900.0 668.96 847.96 597.8299999999999 647.83 766.19 838.27 613.21 563.64 640.14 806.83 1176.8899999999999 True False 736.8723267376768 919.4205651158786 638.4023388438324 687.844987771321 712.3754576120057 831.4434070475322 636.5460421113876 552.397758032974 613.2371419468147 755.8866161055311 1032.139990920387 0.7139267281762699 0.8907905644621004 0.6185230147652275 0.6664260602459083 0.6901926714192727 0.8055529427806705 0.6167245215871952 0.5351965459069037 0.5941414414143324 0.7323489282025462 1.0 10.011422943901565 -10.821903741682975 1.0809580699687626 0.9990747829320445 0.6781413447313619 0.1463594229272921 0.12126978577316802 0.2891262978291342 0.6025039149966168 0.06936919895149572 0.017371488930928908 1.5069410320544993e-11 10.821903741682975 -0.32093343820068265 KDS(ph)LPDADLASCGSLSQSSASFFTPR ddPTM_A549_MK2206_60min_R1 4 KDSLPDADLASCGSLSQSSASFFTPR 26 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(0.911)LPDADLAS(0.081)CGS(0.006)LS(0.002)QSSASFFTPR;KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(0.998)LPDADLAS(0.001)CGSLSQSSASFFTPR 117.6 1.93e-17 16521200.0 2843.04 3399.25 3281.72 3095.79 3881.98 3362.8099999999995 3138.4 2884.3 4967.4 4052.45 5028.0 True False 3322.875646345514 3572.2573056293377 3747.1172428538102 3854.258688975295 3310.945884427809 3718.660322147382 3708.606655892394 3293.158357798291 3842.291831307794 3136.998730451243 3779.4088342594923 0.8792051328833209 0.945189436307506 0.9914559147152946 1.0198046461756944 0.8760486175549012 0.9839264512583453 0.9812663351672112 0.8713421866262655 1.0166383156218193 0.8300236539680634 1.0 11.883944873981253 KDS(ph)LPDADLASCGSLSQSSASFFTPR ddPTM_A549_PD325901_60min_R1 2 KDSLPDADLASCGSLSQSSASFFTPR 26 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(1)LPDADLASCGSLSQSSASFFTPR 152.02 2.661e-33 14233400.0 2376.1800000000003 2948.85 2700.59 2530.92 3360.2799999999997 3165.7 2795.8599999999997 3807.1000000000004 3914.8 5191.7 5441.7 True False 2617.4080443487383 3197.3599384899735 2883.8682773669193 2687.249180263636 3124.2655251366755 3139.9195887844894 2902.2579822532966 3731.164403887826 3750.2745700837145 4863.895175978932 4772.405397778444 0.5484462920034292 0.6699682176996835 0.6042798205511545 0.5630806598103655 0.6546521648372583 0.6579322851001138 0.6081331614460704 0.7818205062010625 0.7858248110752427 1.019170579733875 1.0 12.220500884384833 -9.378157416600743 0.3771586095096773 1.026910516150072 0.5817556417732117 0.9200630116196993 0.04401393189981999 0.22167101296217198 0.07749211247992273 0.03776515019381426 0.020085174930436996 4.186417945662381e-10 9.378157416600743 -0.4451548743768603 down KDS(ph)LSQLEEYLR ddPTM_A549_MK2206_60min_R1 1 KDSLSQLEEYLR 12 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 KDS(0.999)LS(0.001)QLEEYLR 86.37799999999999 0.00013247 7413600.0 619.36 539.15 546.23 449.53 872.87 483.48 421.5 528.06 725.56 479.57 737.94 True False 723.8928261018334 566.590432104158 623.6936275989533 559.6648701801688 744.4719792838966 534.64153269195 498.08109401562734 602.9141221159259 561.2218184812341 371.2348039241701 554.6891318920942 1.3050423822665684 1.0214558020480182 1.1244021051421695 1.0089703186920247 1.3421427182905787 0.9638579556593077 0.8979463728027773 1.086940571666389 1.0117772031459429 0.6692664099219954 1.0 9.115535648573157 KDS(ph)LSQLEEYLR ddPTM_A549_PD325901_60min_R1 2 KDSLSQLEEYLR 12 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 KDS(0.998)LS(0.002)QLEEYLR;KDS(0.999)LS(0.001)QLEEYLR 132.59 2.3883e-08 15134500.0 2412.4 1909.1599999999999 1809.94 2024.96 2491.4 2591.5 2681.7 2559.3999999999996 3484.5 3825.8 3547.5 True False 2657.305072084983 2070.0516133976034 1932.7734124533822 2150.0371801821666 2316.412658863404 2570.3956832090857 2783.7535609825463 2508.3507591895404 3338.0585826751576 3584.238335084886 3111.179989455323 0.8541148635216697 0.6653590021836085 0.6212348430512227 0.6910680794647871 0.7445447279535057 0.8261803212674582 0.8947581208472289 0.8062377514933425 1.0729236476156285 1.1520511019076018 1.0 11.603246145424189 -8.045790349707302 0.8938921979470604 1.034162964576944 0.70222238290769 0.7402921856699594 0.08284493924581367 0.18219237293120102 0.29063500781110707 0.015597002128303783 0.023380847347201496 8.999319076929264e-09 8.045790349707302 -0.3319405816692539 KDS(ph)LTQAQEQGNLLN ddPTM_A549_MK2206_60min_R1 2 KDSLTQAQEQGNLLN 15 1 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 KDS(0.947)LT(0.053)QAQEQGNLLN;KDS(0.967)LT(0.033)QAQEQGNLLN 177.04 9.9599e-28 31601000.0 5782.0 5957.1 5485.4 4580.6 8233.400000000001 5530.2 4676.7 5623.4 7604.6 8229.9 8155.2 True False 6757.860243672182 6260.290945168652 6263.312203341626 5702.847205630952 7022.277766719029 6115.402093350336 5526.39585381467 6420.534170940234 5882.170242050825 6370.759874086212 6130.038767930192 1.1024172112950559 1.0212481816460746 1.0217410428313545 0.930311768249472 1.1455519341014058 0.9976123030972611 0.9015270641886426 1.0473888361897143 0.9595649333938782 1.0392691001263112 1.0 12.58168048257876 -7.508303251573646 24.936573523663267 0.9796835797864282 1.0390137812515727 0.1437490911217103 0.062421484048286964 841.1685863878474 1439119.3113269054 0.008473310644626544 0.013248661256794554 3.102392547094556e-08 7.508303251573646 0.05933020146514456 KDS(ph)LTQAQEQGNLLN ddPTM_A549_PD325901_60min_R1 2 KDSLTQAQEQGNLLN 15 1 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 KDS(0.949)LT(0.051)QAQEQGNLLN;KDS(0.835)LT(0.165)QAQEQGNLLN 211.57 1.6102e-45 47096000.0 7257.8 7411.5 7860.3 7558.7 8889.2 8661.2 8107.0 8373.9 8861.0 8688.9 9506.6 True False 7994.606513090033 8036.093115661512 8393.747225823692 8025.583731946781 8264.853258075203 8590.66605881171 8415.51632132062 8206.875995302533 8488.602984957544 8140.2813711430435 8337.3484673026 0.9588907725811472 0.9638667673754371 1.0067645917334842 0.9626062486678472 0.9913047643970133 1.0303834717359568 1.009375625155237 0.9843508433752345 1.0181418011071668 0.9763633369850843 1.0 13.025372919974872 -7.0015714510941125 10.99547969139652 1.0082871876794026 0.9750463963356132 0.3443501049420563 0.018571972697144442 0.06421477599294087 240.96678566388036 0.0023029187723105616 0.0042360874819385025 9.9638813865641e-08 7.0015714510941125 -0.03324079134378943 KDS(ph)PEPQVK ddPTM_A549_MK2206_60min_R1 1 KDSPEPQVK 9 1 Q96JQ2 Q96JQ2 CLMN Calmin 1 KDS(1)PEPQVK 66.498 0.0022339 7612600.0 2100.9 2516.9 2597.1 2101.6 3090.6 2046.2 2174.1 2765.7 3368.6 3549.8 3196.8 True False 2455.480557926475 2644.999459450904 2965.407832300023 2616.4920943444076 2635.976834093062 2262.727525842368 2569.105827993773 3157.746444601024 2605.617478548827 2747.897714556829 2402.946332808421 1.0218624213120293 1.100731807172566 1.23407160277035 1.0888683024753227 1.0969769894995067 0.9416471333331137 1.0691482339479277 1.314114427562116 1.0843427682812774 1.143553510554374 1.0 11.230588712465801 -10.031005367746733 1.1566547138556509 1.012000392190824 1.1062160156543848 0.0 0.10170278642514133 0.6241659762710957 1.6781236611708195 0.03170947528219603 0.01775423193099922 9.3109636733089e-11 10.031005367746733 0.09421562346356072 KDS(ph)PEPQVK ddPTM_A549_PD325901_60min_R1 2 KDSPEPQVK 9 1 Q96JQ2 Q96JQ2 CLMN Calmin 1 KDS(1)PEPQVK;KDS(1)PEPQVK 66.023 0.0023239000000000003 28048000.0 9485.1 9813.8 11136.2 10696.3 11757.599999999999 10853.7 11307.5 10810.7 11688.2 10727.900000000001 11705.7 True False 10448.020369438438 10640.84336753409 11891.96949941067 11356.986157940171 10931.786737517994 10765.311065732769 11737.813100201425 10595.072107669916 11196.985600810385 10050.538563165128 10265.973108546068 1.017733074007453 1.0365158037162552 1.1583869715683375 1.1062746841296391 1.064856358177839 1.0486400998626246 1.143370723466059 1.032057262925215 1.0906891614092853 0.9790146980609565 1.0 13.325582766112767 -10.815892616145117 0.7421112804749094 0.9918072498049212 1.080322787953064 0.37189673402339973 0.04348481699281378 0.8413776070985459 0.6931461384174209 0.04689414841791898 0.008118597696593514 1.5279438116294466e-11 10.815892616145117 0.08851553814814273 KDS(ph)PHSR ddPTM_A549_MK2206_60min_R1 1 KDSPHSR 7 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 KDS(0.964)PHS(0.036)R 75.387 0.007593600000000001 13340000.0 3544.1 3176.0 1929.4 1551.3 852.34 827.55 773.74 830.44 765.33 5556.2 6531.9 True False 4142.257435074121 3337.6448342071862 2203.0179321703695 1931.368569640502 726.9619150879706 915.1207917167687 914.3185425472155 948.1574131158385 591.9839769808742 4301.050561051508 4909.848958731021 0.8436629048859196 0.6797856435628153 0.44869362595214174 0.3933661882217402 0.14806197119266537 0.18638471354387384 0.18622131764793157 0.1931133566603432 0.12057071041425191 0.8760046586368188 1.0 12.261462928378958 -10.87417351622114 1.1256414254050842 0.9995332842781423 0.33217205066612804 0.49711747502984394 0.2240744194378169 0.3317665825540012 0.7471917979845052 0.17202329587525764 0.04166532565150001 1.336061605367103e-11 10.87417351622114 -0.6673612336120143 KDS(ph)PHSR ddPTM_A549_PD325901_60min_R1 2 KDSPHSR 7 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 KDS(0.999)PHS(0.001)R;KDS(0.982)PHS(0.018)R 91.65799999999999 0.0051758 75363000.0 10313.7 8002.1 5851.4 6911.7 9824.0 6738.2 5220.9 5304.6 11494.6 9819.4 12939.0 True False 11360.73923145535 8676.46505037239 6248.511191326629 7338.620011390396 9133.996130960128 6683.326333243086 5419.584206486104 5198.795591621807 11011.521935548253 9199.40140821071 11347.585027078909 1.0011592073859814 0.7646089480420384 0.5506467831186738 0.6467120531706209 0.8049286354024701 0.5889646402555756 0.47759802579608535 0.4581411445004241 0.9703846156932331 0.8106924412778616 1.0 13.470097677931932 -8.835056457516236 9.59114803970098 0.9865162144788144 0.6571983505759614 0.3454652615397683 0.15694754484480344 0.20590493530279202 25.157097707018124 0.026356485977446484 0.02803523474404943 1.4619871063589085e-09 8.835056457516236 -0.329317863902853 KDS(ph)PWVKPSR ddPTM_A549_MK2206_60min_R1 1 KDSPWVKPSR 10 2 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 KDS(0.96)PWVKPS(0.04)R 47.621 0.006737000000000001 4787500.0 3106.3 2736.0 3951.5 2193.8 4948.4 3496.5 2841.9 3449.7 5254.4 4187.0 4311.9 True False 3630.5674982564683 2875.2507135991377 4511.88211826019 2731.2810984834246 4220.496915105844 3866.497309211144 3358.236443850561 3938.7055392631714 4064.286789552616 3241.15379200221 3241.1362276140626 1.1201527005636176 0.8871119606458909 1.3920680284338363 0.8426924716132762 1.3021658513294674 1.1929450160931483 1.036129371927912 1.2152236939953058 1.2539697513870034 1.0000054192070047 1.0 11.662283944248085 -5.6726479380213926 21.28611283069889 1.1352662753425675 1.0036545351802815 0.09529712950789715 0.15863252686946866 12.24140085349498 2927.995207970185 0.020431094966973602 0.07912988283251175 2.1249663736209593e-06 5.6726479380213926 -0.13161174016228605 KDS(ph)SSEVFSDAAK ddPTM_A549_MK2206_60min_R1 2 KDSSSEVFSDAAK 13 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 KDS(0.985)S(0.006)S(0.01)EVFSDAAK;KDS(0.836)S(0.147)S(0.017)EVFSDAAK 157.75 1.5928999999999998e-18 8448200.0 4299.200000000001 3245.3 3501.6 2623.0 4493.5 2878.9 3466.8 2809.8 4287.299999999999 4328.1 4119.4 True False 5024.799854651581 3410.471908202956 3998.179533164593 3265.6351177509455 3832.5121025034578 3183.5432871408425 4096.672685013941 3208.09775465161 3316.233395411261 3350.379204004002 3096.4392903437856 1.6227671152221095 1.1014173340451008 1.2912184474705755 1.054642061911175 1.2377158869076192 1.0281303744816472 1.3230269677139717 1.036060278868063 1.0709828562610288 1.0820102995244008 1.0 11.596394445111661 -2.0000000000000004 0.489432294046988 1.054808246514107 14.798195444088647 0.5421868684088673 0.12072309347443382 45.210811659822284 0.44108283321406583 0.02118086917051233 640.0472577222798 0.00999999999999999 2.0000000000000004 13.74338719757454 KDS(ph)SSEVFSDAAK ddPTM_A549_PD325901_60min_R1 2 KDSSSEVFSDAAK 13 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 KDS(0.95)S(0.025)S(0.025)EVFSDAAK;KDS(0.987)S(0.013)SEVFSDAAK 113.59 2.1966999999999997e-14 4288700.0 2294.0 2141.8 2259.6 1858.6 2841.5 2222.4 2457.9 2495.3 3633.1 4701.0 4063.9 True False 2526.885191246455 2322.2970026477537 2412.9500440786223 1973.4015008131398 2641.9228426428344 2204.3015112343714 2551.436729514488 2445.529283975019 3480.4134414455775 4404.17805772232 3564.066063184631 0.7089894369097596 0.6515864076247486 0.677021694127229 0.5536938614010508 0.7412665185791125 0.6184794198973805 0.7158780685548463 0.68616272555561 0.9765288801453061 1.2357172902084246 1.0 11.79930836342583 -8.75623827500913 4.851406331896192 0.990140974730546 0.6656398418332181 0.7953662635537302 0.0882390428979534 0.03437058287337277 2.1112810497315 0.0077402340683596655 0.008498685887890415 1.752918501887251e-09 8.75623827500913 -0.32450113289732785 KDSDSFK ddPTM_A549_MK2206_60min_R1 1 KDSDSFK 7 1 P05556;P05556-2;P05556-5;P05556-4;P05556-3 P05556 ITGB1 Integrin beta-1 0 50.607 0.05230599999999999 2125600.0 2538.5 3095.3 2864.3 2457.9 3956.5 2718.3 2496.1 2924.6 4006.0 4444.0 4604.4 False True 2966.93673963366 3252.8375489047553 3270.500810156312 3060.0856103393235 3374.5040911438564 3005.948701738497 2949.609059958263 3339.1710062118646 3098.647396267468 3440.097313507957 3461.000405024744 0.8572483075489408 0.9398547148917481 0.9449582280915481 0.8841621647592514 0.9750082913150456 0.8685201820185879 0.8522417552092645 0.9647993688079305 0.8953039681153446 0.9939603903292125 1.0 11.756973394997333 -10.812293907904634 0.8075775026888194 1.0067137654720852 0.909707198002093 0.4104738741781174 0.04056765577416699 0.59572817135006 0.6081056766176053 0.038013584485997905 0.007182834603185583 1.540657463273588e-11 10.812293907904634 -0.09700656746999226 KDSGS(ph)PNPAR ddPTM_A549_MK2206_60min_R1 1 KDSGSPNPAR 10 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 KDS(0.205)GS(0.795)PNPAR 73.156 0.00074637 25817000.0 3949.4 2819.7 2842.5 2106.2 3435.1 2659.8 2722.9 2604.6 3398.1 5330.6 4981.9 True False 4615.9621664404885 2963.210686087534 3245.6092423521677 2622.219094550911 2929.8013404494523 2941.2582705676523 3217.6156842115106 2973.8100262529674 2628.435775650646 4126.413757737518 3744.7567365547648 1.2326467354691901 0.7912959090671761 0.8667076316786814 0.7002374997964204 0.7823742759709715 0.785433735082524 0.8592322307087343 0.7941263573208548 0.7018976025846871 1.1019177073525699 1.0 11.870656287360791 -5.257976281134841 24.616504852667433 0.8306326773826145 1.2326469230049477 0.49219752748152934 0.1149022256383773 169.79574045023045 1206877.4079259804 0.015485166062816833 0.15624673043986412 5.521075916508013e-06 5.257976281134841 0.40201424562233323 KDSGS(ph)PNPAR ddPTM_A549_PD325901_60min_R1 1 KDSGSPNPAR 10 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 KDS(0.264)GS(0.736)PNPAR 46.41 0.014903 22397000.0 7092.5 7048.1 5188.3 5249.7 6807.9 5738.7 4694.8 5490.6 6745.5 8938.7 9557.5 True False 7812.525378777457 7642.068122309102 5540.409237782407 5573.962046066254 6329.736589979993 5691.965929859918 4873.463183093136 5381.085675707625 6462.010093108128 8374.308956511915 8381.988089984283 0.9320611404963361 0.9117250036946106 0.6609898723672365 0.6649928377644242 0.7551593395298969 0.6790711068488993 0.5814209147966319 0.6419820235890737 0.770940023266037 0.9990838529725968 1.0 13.033076756198286 -10.171518930403852 0.8634500570648099 0.9845482572974699 0.7277878259767994 0.4861605680613478 0.10446149944309734 0.3846447683648309 0.5652157367893091 0.053135539564263486 0.02215956959938637 6.737225280297373e-11 10.171518930403852 -0.2567604313206705 KDSGSSSVSS(ph)TSSSSSSSPGDK ddPTM_A549_MK2206_60min_R1 1 KDSGSSSVSSTSSSSSSSPGDK 22 1 Q9H7S9 Q9H7S9 ZNF703 Zinc finger protein 703 1 KDSGSSSVS(0.049)S(0.369)T(0.369)S(0.049)S(0.049)S(0.006)S(0.006)S(0.007)S(0.049)S(0.043)PGDK 55.985 0.0022611000000000003 2696500.0 279.66 296.9 318.65 235.11 240.68 167.48 0.0 136.22 358.5 444.83 475.92 True False 326.85977096945027 312.01094183756726 363.83936150414 292.7119605544889 205.27629082686815 185.20262243577355 0.0 155.5296021562539 277.3003224068614 344.34259405214783 357.7359292762087 0.9136900831593047 0.8721822895140704 1.017061278245884 0.8182347273496404 0.5738207264844618 0.5177076364973623 0.0 0.43476092119382603 0.7751536810068559 0.9625608329273523 1.0 8.482751212736025 -9.545476841886554 1.4868301698889537 0.9429408507265922 0.6476620464811834 0.1767100177407097 0.26816020589730927 0.49335012325670724 2.219833542938728 0.07270449094297106 0.056846068320990324 2.847889655645359e-10 9.545476841886554 -0.29527880424540875 KDSGSSSVSSTSSSSSS(ph)SPGDK ddPTM_A549_PD325901_60min_R1 1 KDSGSSSVSSTSSSSSSSPGDK 22 1 Q9H7S9 Q9H7S9 ZNF703 Zinc finger protein 703 1 KDSGSSSVSSTSSSS(0.004)S(0.094)S(0.542)S(0.36)PGDK 164.05 1.8266999999999998e-33 4272300.0 558.99 530.14 638.72 460.05 691.63 912.21 596.32 674.78 469.13 738.17 554.54 True False 615.7382532933117 574.8167583264916 682.0673801353776 488.46624365064326 643.0522947939696 904.7812642022618 619.0132839188245 661.3209835453307 449.41409754352054 691.56182022312 486.3350955186905 1.2660781814164759 1.1819355905488023 1.402463828788529 1.0043820570458315 1.3222411886769876 1.8604070990132562 1.2728122844160135 1.3598051829675437 0.9240832127572602 1.4219862530906786 1.0 8.925806894663774 -8.75999241839703 24.95760250150945 0.964150390478535 1.3351539692668593 0.05288819793518762 0.24031117558428378 26.548423709346732 457914.18212828034 0.03413159627209295 0.03769337893245696 1.7378311663002257e-09 8.75999241839703 0.37100357878832424 KDSGSSSVSSTSSSSSSS(ph)PGDK ddPTM_A549_PD325901_60min_R1 1 KDSGSSSVSSTSSSSSSSPGDK 22 1 Q9H7S9 Q9H7S9 ZNF703 Zinc finger protein 703 1 KDSGSSSVSSTSSS(0.002)S(0.124)S(0.187)S(0.126)S(0.56)PGDK 133.15 3.0056e-22 4301000.0 451.6 480.12 562.41 517.06 730.1 422.0 801.52 588.0 554.1 510.96 768.25 True False 497.4460995496515 520.5813973812863 600.5785246460697 548.9976218715389 678.8202947082649 418.56337191365424 832.0222822085738 576.2718787229232 530.8131039346547 478.6978983990209 673.7601203379987 0.7383133618833102 0.7726509504898141 0.8913833076745226 0.8148265314309914 1.0075103500749312 0.6212350052770674 1.2348939290012908 0.8553071951391699 0.7878369287697925 0.7104871362212373 1.0 9.396091228069237 -3.6197143017048563 0.4496699701406281 0.909871557622027 1.8642348051384936e-13 0.06665135748860196 0.15737771765490774 28.295654407143786 1.2209800008828477 0.02915220432824756 19.114115024702368 0.00024004114975594918 3.6197143017048563 -0.9098715576218406 KDSIS(ph)EDEMVLR ddPTM_A549_PD325901_60min_R1 1 KDSISEDEMVLR 12 1 Q8N5D0-5;Q8N5D0-3;Q8N5D0-6;Q8N5D0-2;Q8N5D0-4;Q8N5D0 Q8N5D0-5 WDTC1 WD and tetratricopeptide repeats protein 1 1 KDS(0.257)IS(0.743)EDEMVLR 75.574 0.00032557 11024000.0 2007.4 1858.8 2000.3 1815.8 2339.0 2294.4 2017.7 1964.1 2413.0 1935.2 2404.6 True False 2211.1897702302253 2015.4475994591685 2136.0523867810552 1927.9578420189935 2174.716709111946 2275.715167105895 2094.484677627805 1924.9244846933566 2311.590001433535 1813.011141736702 2108.8494440152986 1.0485289865074807 0.9557095719558383 1.0128994238270332 0.9142226096274169 1.031233744677019 1.079126427713531 0.9931883395335502 0.9127842151824056 1.096137995053935 0.8597157786118134 1.0 11.042240385898115 -8.7856713844279 24.998516406710817 1.0453984822848483 0.9943152832857459 0.0 0.07717031522602236 337.73190863796924 348413.4889696302 0.010100693054711769 0.010755571220631605 1.6380555124125575e-09 8.7856713844279 -0.05108319899910241 KDSNELS(ph)DS(ph)AGEEDSADLKR ddPTM_A549_PD325901_60min_R1 2 KDSNELSDSAGEEDSADLKR 20 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 2 KDS(0.04)NELS(0.961)DS(0.999)AGEEDS(0.001)ADLKR;KDS(0.01)NELS(0.99)DS(0.628)AGEEDS(0.372)ADLKR 80.711 0.00016152 32372000.0 7151.299999999999 7324.0 7892.0 8205.2 8441.5 7954.8 7195.9 8125.9 8051.099999999999 7613.5 8824.900000000001 True False 7877.2947114911885 7941.219183580234 8427.598578451272 8712.016568638748 7848.598161594051 7890.018746205534 7469.743912247571 7963.822549854768 7712.740265454429 7132.782310671962 7739.493245650257 1.0178049726858251 1.0260644891761292 1.088908318795645 1.125657235185917 1.0140971653415567 1.0194490124582607 0.9651463829942237 1.0289850119490171 0.9965433162938848 0.9216084418292788 1.0 12.918023391610397 -6.977711769856986 24.950033915362773 1.0001239659891088 1.0643770418184815 0.4407876675970388 0.03884845571238517 149.33405333687858 167167.7807203552 0.0044315560231374005 0.008374435918832489 1.0526602657476997e-07 6.977711769856986 0.06425307582937267 KDSNELS(ph)DSAGEEDSADLKR ddPTM_A549_MK2206_60min_R1 2 KDSNELSDSAGEEDSADLKR 20 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KDSNELS(0.999)DS(0.001)AGEEDSADLKR;KDS(0.002)NELS(0.998)DSAGEEDSADLKR 93.96600000000001 5.1084e-07 41075000.0 5606.4 5880.4 5085.2 4127.799999999999 7227.0 5016.4 4832.0 5000.5 7745.3 7412.1 7891.0 True False 6552.623256679995 6179.687242780841 5806.357825579326 5139.111185303984 6163.917873549007 5547.2321183831755 5709.911853578909 5709.33618838899 5991.001916702553 5737.701462072983 5931.4469194792455 1.1047259371336138 1.0418515628094653 0.9789108634709149 0.8664177990747618 1.0391929586870805 0.9352241019245601 0.9626507547133565 0.9625537016337734 1.0100405513244544 0.9673358861612686 1.0 12.53416836395752 -5.491404413974167 2.998154486326945 0.9865101694402728 1.1024415841140374 0.4311397298375701 0.04499159030772968 0.22087599939833774 3.588804012722294 0.00629372705121145 0.046419153595503644 3.225489155098578e-06 5.491404413974167 0.11593141467376455 KDSNELS(ph)DSAGEEDSADLKR ddPTM_A549_PD325901_60min_R1 1 KDSNELSDSAGEEDSADLKR 20 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KDS(0.002)NELS(0.993)DS(0.006)AGEEDSADLKR 88.001 9.970700000000002e-07 19436000.0 6315.0 5611.2 5259.9 5005.6 6451.4 5345.3 4915.1 5412.2 6796.3 6768.3 6367.5 True False 6956.09415114271 6084.075516508112 5616.868444348183 5314.784543457578 5998.275920121766 5301.769649028563 5102.146820145921 5304.249425211237 6510.675145769887 6340.948382914695 5584.337866908176 1.2456434973899637 1.089489150103416 1.0058253240071269 0.9517304772965254 1.0741248225087734 0.9493998707431255 0.9136529597144121 0.9498439298673717 1.1658813096447882 1.1354879547117058 1.0 12.447170515637831 -5.307666024951293 3.055019915651326 1.0394116310527917 1.2676799824263063 0.3929175510373455 0.07917082417290648 0.3162416631795329 4.553529485559452 0.012874626203909612 0.16348848044613434 4.924180625472252e-06 5.307666024951293 0.22826835137351464 KDSNELSDS(ph)AGEEDSADLKR ddPTM_A549_PD325901_60min_R1 1 KDSNELSDSAGEEDSADLKR 20 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KDSNELS(0.086)DS(0.914)AGEEDSADLKR 145.19 1.2301e-21 28560000.0 5635.7 6499.4 6009.9 5206.1 6079.5 5438.7 5712.2 5932.1 5509.0 7266.0 6418.2 True False 6207.832115216938 7047.127247646284 6417.767954464559 5527.668973089039 5652.496893136416 5394.409030395239 5929.580896835781 5813.779611857579 5277.475888063552 6807.223519976684 5628.802088321961 1.1028691394384407 1.2519763774013148 1.1401658565646606 0.982032923942602 1.0042095643873523 0.9583582697972246 1.053435669578407 1.0328626803062395 0.9375841973574977 1.209355634318639 1.0 12.458612207833884 -6.20021824094033 3.889534544658603 0.9821526135917836 1.180841011943122 0.3029699418465768 0.08207180133022542 0.07963856571707817 2.4264801319663345 0.006507566111525583 0.018109753311115185 6.306403564982374e-07 6.20021824094033 0.19868839835133845 KDSPHS(ph)R ddPTM_A549_MK2206_60min_R1 1 KDSPHSR 7 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 KDS(0.452)PHS(0.548)R 40.496 0.048277999999999995 12063000.0 2875.2 2723.8 1989.6 1075.0 586.24 704.63 958.64 480.08 503.18 5215.3 5096.1 True False 3360.4634681090033 2862.4297857095526 2271.755197390985 1338.3750482585842 500.0048725874318 779.1934789044608 1132.8124791628488 548.1328101833384 389.21053341334647 4037.160107816843 3830.5977247951087 0.877268695263152 0.7472540818320093 0.5930550166325536 0.3493906550393963 0.1305292041894522 0.20341302712650108 0.29572734088736524 0.14309328453763884 0.10160569221195488 1.0539243214406657 1.0 11.903353811881527 -10.928391804849062 1.2048812829773405 0.9974005901907184 0.35259021506552835 0.4930096100181831 0.24888189396794133 0.36493401941617154 0.9474662254603771 0.19218678718373755 0.04604424284964955 1.1792562730471132e-11 10.928391804849062 -0.64481037512519 KDT(ph)LAMK ddPTM_A549_MK2206_60min_R1 2 KDTLAMK 7 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 KDT(1)LAMK;KDT(1)LAMK 55.567 0.024528 4128200.0 2699.8999999999996 3381.7 3224.0 2798.9 4348.2 3592.3 2615.2 3454.7 4595.700000000001 4450.9 4176.299999999999 True False 3155.577113782518 3553.81408559145 3681.211678924675 3484.630625647397 3708.58554002571 3972.434801624249 3090.3479883028895 3944.414304575029 3554.7812878248637 3445.4385987157007 3139.209449983674 1.0052139444849497 1.1320729445465743 1.172655643905449 1.1100344469418948 1.181375629474165 1.265425217691323 0.9844351062076987 1.256499245246456 1.1323810483060794 1.0975497664654454 1.0 11.61618557429316 -10.41369397001878 0.8239534084215395 1.0018900851952037 1.140958857843915 0.09766521086323665 0.08741258933721473 0.5883650081785126 0.7388498531716231 0.04750970766698494 0.015037999111604621 3.8575008459965093e-11 10.41369397001878 0.1390687726487112 KDT(ph)LAMK ddPTM_A549_PD325901_60min_R1 1 KDTLAMK 7 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 KDT(1)LAMK 45.368 0.044248 1812600.0 1935.5 1593.6 1874.3 2152.2 2219.8 2318.8 1969.4 2207.7 2259.1 1849.5 2146.1 True False 2131.9905351602083 1727.8982647396856 2001.501269081503 2285.136505999162 2063.88890589427 2299.916461595691 2044.3465946970314 2163.665691592854 2164.1578832318683 1732.7222543623557 1882.143305248786 1.132746124705099 0.9180481953319107 1.0634159808659946 1.2141139835774128 1.0965631044876578 1.2219667095389863 1.0861800953178775 1.1495754258238353 1.1498369317557384 0.9206112252612564 1.0 10.878160762835236 -4.896492473228354 21.39039584795189 1.088322196791294 8.405463792211503 0.017856925450966954 0.09855053472367457 4847.1840353640555 1014042.8299337227 0.012427942962769048 21395.587283012534 1.2691341396592195e-05 4.896492473228354 7.317141595420209 KDT(ph)PHYK ddPTM_A549_MK2206_60min_R1 2 KDTPHYK 7 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 KDT(0.83)PHY(0.17)K;KDT(0.964)PHY(0.036)K 48.981 0.021233000000000002 54997000.0 7617.700000000001 11672.2 8280.6 5200.700000000001 10556.8 8281.8 5853.5 7922.200000000001 7889.1 8834.8 9512.5 True False 8903.381525116143 12266.265124002872 9454.913594449023 6474.871733468294 9003.908704508394 9158.174578986083 6917.005181068737 9045.196110719979 6102.231446303968 6839.012543964921 7150.283718355894 1.2451787755302315 1.7154934834982078 1.3223130671272223 0.9055405335660022 1.2592379630187198 1.2808127536919438 0.9673749257405976 1.265012196299225 0.8534250788732464 0.9564672974315842 1.0 12.803784772839016 -6.369068411565218 0.4032628959039619 0.9340889001444778 1.608593264230073 0.3833319964263384 0.1894915186453731 1.6631902566533265 0.3209953168996637 0.05324436338132822 0.4684684809547324 4.274955402749736e-07 6.369068411565218 0.6745043640855953 KDT(ph)PHYK ddPTM_A549_PD325901_60min_R1 4 KDTPHYK 7 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 KDT(0.987)PHY(0.013)K;KDT(1)PHYK;KDT(0.806)PHY(0.194)K;KDT(1)PHYK 96.34200000000001 0.007274500000000001 184700000.0 13832.0 16137.400000000001 16187.6 15754.0 18313.5 12625.970000000001 13954.1 14853.84 14485.7 16361.81 18426.4 True False 15236.214457419783 17497.35533221023 17286.18787994651 16727.08880007006 17027.22293814519 12523.148286447007 14485.130911476504 14557.568508587936 13876.916404378688 15328.72252427604 16160.069614573511 0.9428309915001495 1.0827524725778859 1.0696852360312508 1.0350876697328828 1.053660246784436 0.774943956624627 0.8963532495190176 0.9008357547828628 0.8587163753220577 0.948555475927669 1.0 13.980145792514383 KDT(ph)PLR ddPTM_A549_MK2206_60min_R1 1 KDTPLR 6 1 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 KDT(1)PLR 56.431999999999995 0.047127999999999996 9880200.0 2167.9 2265.6 1594.0 1471.4 2530.9 2185.0 1613.8 2138.8 2981.6 3233.0 3266.6 True False 2533.788519933745 2380.9093628399887 1820.0531687983664 1831.8930660536553 2158.6079626629567 2416.215249714385 1907.0065706344458 2441.9814498002934 2306.2723606368168 2502.663054583984 2455.413066426423 1.0319194576989805 0.9696573645366863 0.741241135222616 0.746063092642807 0.8791221290536534 0.9840361618792369 0.7766540777637381 0.9945297934552096 0.9392604414186556 1.019243193254782 1.0 11.261750029673145 -8.721267054182597 0.8154925761142069 0.9828235243618578 0.8723720562334354 0.2000035658810394 0.09556013691529026 0.7037097394616134 0.9552524493496584 0.024069277697036127 0.025336234192534487 1.899909637755681e-09 8.721267054182597 -0.11045146812842244 KDT(ph)PLR ddPTM_A549_PD325901_60min_R1 1 KDTPLR 6 1 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 KDT(1)PLR 54.722 0.050714999999999996 17972000.0 1729.9 2135.0 2120.6 1719.2 2408.4 2189.2 1917.0 2190.8 1845.3 2348.0 2501.0 True False 1905.5181745149293 2314.923942783151 2264.516668203722 1825.3910794135102 2239.2422925289484 2171.371881026947 1989.9524840226518 2147.102775350647 1767.7484582036072 2199.746879287813 2193.3928551452473 0.8687537073192232 1.055407806838076 1.0324263904168525 0.8322225884576578 1.0209034315381067 0.9899603146483114 0.9072485484552545 0.9788956731184688 0.8059424712982145 1.0028968928788387 1.0 11.098948518657245 -7.77073467326764 24.615158463742443 0.9123702864715698 0.969999224662522 0.0 0.08260931712122274 333.43707296622904 882983.6781246327 0.014247653630603381 0.019834817655698708 1.695373251007294e-08 7.77073467326764 0.05762893819095216 KDT(ph)PRKEK ddPTM_A549_MK2206_60min_R1 2 KDTPRKEK 8 3 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 KDT(1)PRKEK;KDT(1)PRKEK 46.606 0.017450999999999998 20925400.0 11477.099999999999 11117.599999999999 8346.599999999999 5023.299999999999 9380.3 7235.200000000001 6122.3 5620.9 7331.0 16130.1 13655.9 True False 13414.15389184537 11683.438352891006 9530.273386883588 6254.008725504504 8000.470296008272 8000.8240616629355 7234.642661665185 6417.679788284304 5670.540205201401 12486.299207159025 10264.76314633337 1.3068157248846974 1.1382082748849782 0.9284455229040384 0.6092696574044644 0.7794110961894026 0.7794455602729494 0.7048036626397405 0.6252146003560477 0.55242776909343 1.2164235091599946 1.0 13.325412717999122 -5.770624016474592 2.2421895569392527 0.7558211881151458 1.2815963889479867 0.4621701146119144 0.18167670280733747 0.1882164029526207 1.792741883359411 0.024100047483955576 0.12960298038587667 1.695805281524223e-06 5.770624016474592 0.5257752008328409 KDT(ph)PRKEK ddPTM_A549_PD325901_60min_R1 2 KDTPRKEK 8 3 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 KDT(1)PRKEK;KDT(1)PRKEK 46.606 0.017450999999999998 33320000.0 7152.1 6916.9 6610.9 6611.1 7003.0 5894.299999999999 5630.200000000001 6930.3 10162.8 15987.3 14871.6 True False 7878.175926902256 7499.8114378626615 7059.5554285711505 7019.452632102528 6511.133439038461 5846.298775048938 5844.46034196366 6792.069729784829 9735.69285808899 14977.859149590304 13042.487478839677 0.6040393705329542 0.5750292227637148 0.5412736979832011 0.5381989166936898 0.4992248180879774 0.44825028849244125 0.44810933124879726 0.5207649032291104 0.7464598201749721 1.1483897664376217 1.0 13.670931427887345 -9.323697817647993 0.9198360863345831 0.9486099973214639 0.5160066008425188 0.8466151439426561 0.08617480510920451 0.11877907536131763 0.21318299916407413 0.020684093189908742 0.016009244337105256 4.745720779342403e-10 9.323697817647993 -0.4326033964789451 KDTDDIES(ph)PKR ddPTM_A549_MK2206_60min_R1 2 KDTDDIESPKR 11 2 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;D6RD46;D6RJ93;Q9UPQ0-7;D6R8Y0;D6RGH8 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 KDT(0.094)DDIES(0.906)PKR;KDTDDIES(1)PKR 108.06 2.6126e-05 513120000.0 13839.5 14437.5 12533.8 11315.099999999999 14620.3 11971.5 11795.5 11670.4 15646.3 16277.6 16209.199999999999 True False 16175.269256710673 15172.307082451602 14311.281309338121 14087.300007954143 12469.6732373943 13238.316183961451 13938.589666574924 13324.714939101052 12102.43803200692 12600.478854715822 12184.008288838302 1.3275819314345627 1.2452640151559042 1.1745955001071857 1.1562122803921133 1.0234458924997363 1.0865321058660962 1.1440069093964738 1.0936232661059286 0.9933051377758739 1.0341817369132165 1.0 13.572701207959867 -2.0000000000162026 0.24250697375234134 0.9852220773628781 3.090448845672829 0.8127309218840103 0.04375383676841617 12.306198668160233 0.14808145198584086 0.022937584875007237 10.627639784208643 0.009999999999626922 2.0000000000162026 2.105226768309951 KDTDDIES(ph)PKR ddPTM_A549_PD325901_60min_R1 4 KDTDDIESPKR 11 2 Q9UPQ0-8;Q9UPQ0-10;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;D6RD46;D6RJ93;Q9UPQ0-7;D6R8Y0;D6RGH8 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 KDTDDIES(1)PKR;KDTDDIES(1)PKR;KDTDDIES(1)PKR;KDT(0.002)DDIES(0.998)PKR 113.52 5.5357e-06 887830000.0 32368.7 29543.1 29860.399999999998 30723.7 36436.6 32957.4 34017.5 35017.5 36258.6 36976.6 40485.2 True False 35654.74659542248 32032.800718518465 31886.906309172122 32621.43317041468 33877.41891544604 32689.00586139116 35312.054577590236 34319.04849180269 34734.777134678 34641.89116553396 35505.7770568278 1.0041956422572094 0.9021855983393701 0.8980765653469971 0.9187640962822285 0.9541382198515037 0.9206672426594599 0.9945439166441138 0.966576465482625 0.9782852260657245 0.975669145617876 1.0 15.115766160593648 -7.76315127814496 24.996249305332654 0.9877061769779746 0.9303293865308476 0.42665725496839113 0.02854106846845401 28.67418820495773 418689.8626042309 0.004289171886046141 0.006095600357007141 1.7252368341836116e-08 7.76315127814496 -0.05737679044712696 KDTGS(ph)PPASEGPTDGSR ddPTM_A549_MK2206_60min_R1 1 KDTGSPPASEGPTDGSR 17 1 Q969R8 Q969R8 ITFG2 Integrin-alpha FG-GAP repeat-containing protein 2 1 KDT(0.213)GS(0.781)PPAS(0.004)EGPT(0.001)DGSR 51.526 0.007292699999999999 5270300.0 781.88 748.57 654.71 606.49 820.53 674.54 433.09 496.9 1162.6 1058.1 1007.8 True False 913.8422288693195 786.6690155990161 747.5577228004882 755.080077226371 699.8311239495183 745.9193750765863 511.776846992237 567.3370966924285 899.2729562907042 819.0744751176344 757.5354461349868 1.2063359325716356 1.0384583581041276 0.9868287043393074 0.9967587405696415 0.9238262414255582 0.9846659702622936 0.6755813864596937 0.7489248187487897 1.1871034693873068 1.0812358409056964 1.0 9.565169585643135 -11.814336461880261 22.630917512543455 0.9999990827259607 1.0223170956470495 0.0 0.1583657747743719 22.409149878446833 272844.42643447855 0.19041548755047197 0.024474905979035986 1.5334285261735968e-12 11.814336461880261 0.022318012921088815 KDTPHY(ph)K ddPTM_A549_MK2206_60min_R1 1 KDTPHYK 7 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 KDT(0.389)PHY(0.611)K 48.56100000000001 0.011366 37896000.0 6206.0 8824.8 6263.2 3891.7 8178.1 5893.0 4006.6 6070.6 6408.1 6376.1 6942.0 True False 7253.421077867442 9273.944626231607 7151.415939032578 4845.166674705053 6975.112323463561 6516.59334854319 4734.547357729566 6931.126140432791 4956.675581632943 4935.734581606228 5218.109810546814 1.390047611341346 1.7772613001526267 1.3704993184655059 0.9285290748216969 1.3367124450630579 1.2488417425351779 0.9073299584765591 1.3282829208430298 0.9498986724301085 0.9458855334224952 1.0 12.34931158938939 -5.614471808626351 0.38443420412671836 0.9772208255492355 1.9415875215612957 0.47533785681866614 0.1906934320260416 2.474956595735608 0.29404760922932466 0.04920801077371607 1.0441810892446675 2.429563147223584e-06 5.614471808626351 0.9643666960120602 KDVGRPQPGR ddPTM_A549_MK2206_60min_R1 2 KDVGRPQPGR 10 2 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ; 96.229 0.00018015 33715000.0 3235.2 3334.9 2796.9 2349.98 3703.3 2795.9700000000003 2301.91 2966.1 4020.5 4182.2 4174.9 False True 3781.222666954038 3504.6321654904114 3193.5424766701053 2925.7252054946125 3158.5494757318475 3091.8376895853235 2720.137250594335 3386.553758300286 3109.863169419212 3237.438115335953 3138.1571086217104 1.2049182166710461 1.116780340876451 1.0176490105916718 0.9323067979791494 1.0064981982750676 0.9852399298591107 0.8667944772812948 1.0791536692016266 0.9909838997146561 1.0316367228528744 1.0 11.615701865825836 -5.6077954083284345 2.2581398112644187 0.9885801490920653 1.2038343486235545 0.643731084922216 0.0512140366970427 0.14817231844620057 1.3254882912850519 0.0064891370425527685 0.04728530135840444 2.467201336729051e-06 5.6077954083284345 0.21525419953148928 KDVGRPQPGR ddPTM_A549_PD325901_60min_R1 2 KDVGRPQPGR 10 2 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ; 124.1 7.9861e-06 33646000.0 3219.2 2974.3 2972.1000000000004 2840.0 3818.6 3209.5 3069.8 3185.1000000000004 3060.2 3512.1 3595.1 False True 3546.010814150215 3224.954699306756 3173.804578689183 3015.420349892027 3550.3947094548435 3183.3628961063314 3186.6229188590146 3121.570681837386 2931.5904361321614 3290.345406621264 3152.9254912165834 1.1246732039906076 1.022845198305774 1.0066221315824826 0.9563880777685302 1.1260636254632497 1.0096537025611738 1.0106876701451732 0.9900553281495089 0.9298000997165912 1.0435848914880814 1.0 11.62247536184399 -8.083192493756336 1.9029224385128567 0.9671455030117619 1.0387965250760731 0.1174047749149203 0.054207172853898346 0.3283559060745933 2.3532464112654714 0.008647972151902654 0.011830449071660426 8.256719032169503e-09 8.083192493756336 0.07165102206431118 KDVHMPK ddPTM_A549_PD325901_60min_R1 2 KDVHMPK 7 1 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;A0A2R8Y6L3;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 ; 41.983999999999995 0.032083 4494100.0 1614.88 1390.8899999999999 2206.5299999999997 1932.1 2536.5699999999997 2390.29 2300.3900000000003 1928.08 2702.3999999999996 2278.1800000000003 1763.81 False True 1778.8214287881767 1508.1051816288789 2356.278394742789 2051.4414288825283 2358.410073891445 2370.8242707381232 2387.9326002717085 1889.6229318505004 2588.8275258491462 2134.3353260033687 1546.8725517128094 1.1499469861421594 0.9749382261382785 1.523253090329741 1.3261864570620403 1.5246311477180472 1.532656499795652 1.5437164475041052 1.2215763540171252 1.673588120096002 1.3797745157738288 1.0 10.595138621341562 -5.75410784173887 24.997791369132177 1.3714902195133096 1.0624425414598926 0.3336958629374924 0.1837236309522849 215.73469215953014 735555.1205932642 0.03489018843204462 0.12982612886571374 1.7615385760341553e-06 5.75410784173887 -0.30904767805341704 KDVLT(ph)PSEAYEELLNQR ddPTM_A549_PD325901_60min_R1 2 KDVLTPSEAYEELLNQR 17 1 Q1MSJ5-1;Q1MSJ5;F2Z2M5 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 KDVLT(0.965)PS(0.035)EAYEELLNQR;KDVLT(0.99)PS(0.01)EAYEELLNQR 75.646 0.00028975 2209900.0 1266.65 1642.1 1576.9299999999998 1628.46 1747.84 1641.9099999999999 1674.5 1481.58 1422.1100000000001 1717.79 1505.97 True False 1395.2393755415546 1780.485529950451 1683.9499526504264 1729.0462756990034 1625.0777481206603 1628.5388293335252 1738.22401382156 1452.0287246229748 1362.3436622207398 1609.3284462401236 1320.745237130382 1.0564031096360627 1.3480915773120326 1.2749998298757366 1.3091444338317266 1.230424840790272 1.2330453925178593 1.3160933425724441 1.0994010682770554 1.0314961764925534 1.2185002837767214 1.0 10.367136491916916 -8.471585398250319 3.2348807022217794 1.015327247332624 1.2574846963204476 0.3558060880608368 0.09491222795386398 0.09386274174901481 1.9659028142770016 0.011363413171789178 0.013555679939615133 3.3760945569246315e-09 8.471585398250319 0.24215744898782354 KDWSLS(ph)KSQVIAEK ddPTM_A549_MK2206_60min_R1 1 KDWSLSKSQVIAEK 14 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KDWS(0.011)LS(0.562)KS(0.427)QVIAEK 70.335 0.00049305 4189800.0 1501.1 1301.4 1176.2 863.56 1739.9 1327.2 1205.3 1359.2 1590.1 1465.4 1632.8 True False 1754.4489816285554 1367.6357012711692 1343.00284638685 1075.1322387666814 1483.9630148315937 1467.6434230759407 1424.287408344094 1551.8707623754246 1229.944888867924 1134.365122235499 1227.3306970125097 1.429483500982354 1.114317196335251 1.0942469292554176 0.8759922988838297 1.2090979378612154 1.195801120796852 1.1604756662658269 1.2644275631277615 1.0021299816437228 0.9242538502432135 1.0 10.261308311706102 -2.000000004964701 0.0867885582526207 0.8719054830550302 1.824327959349271 0.24978869050125063 0.13279889746924983 162.51583666563806 0.988854462639569 1.4562528951652602 18.495505058664193 0.009999999885683534 2.000000004964701 0.9524224762942407 KDWSLS(ph)KSQVIAEK ddPTM_A549_PD325901_60min_R1 1 KDWSLSKSQVIAEK 14 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KDWS(0.072)LS(0.464)KS(0.464)QVIAEK 64.507 0.0010507 6600500.0 1802.6 1511.4 1693.4 1935.7 1826.3 1797.9 1733.7 1854.6 2082.8 1563.9 1862.4 True False 1985.5986249960156 1638.7709822587606 1808.324307241433 2055.2637927063356 1698.026988392965 1783.2584984918449 1799.6769022170415 1817.608548094446 1995.267159132105 1465.1550871031566 1633.3366067263119 1.2156701912018861 1.0033271620253101 1.1071351121345698 1.2583222492182369 1.0396062767467826 1.091788729370378 1.1018407931382403 1.1128193298364073 1.2215896900340761 0.8970319290398807 1.0 10.673606424497196 -11.092377778974608 1.4393256129668495 1.0003661889507929 1.1354471349459045 0.3867064637664799 0.08092829160955543 0.4206059231122716 1.5638580224362866 0.0539071221846321 0.011933776682726119 8.083923983771713e-12 11.092377778974608 0.13508094599511167 KDWSLSKS(ph)QVIAEK ddPTM_A549_MK2206_60min_R1 1 KDWSLSKSQVIAEK 14 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KDWS(0.009)LS(0.086)KS(0.905)QVIAEK 70.09100000000001 0.00051641 3298300.0 1424.2 1371.8 924.14 1018.6 1853.1 1372.4 1402.5 1254.2 1889.3 1632.5 1566.8 True False 1664.5701416530474 1441.618760568457 1055.196948189035 1268.1570457266923 1580.5114447867265 1517.6264570746089 1657.3160957459481 1431.9866908264114 1461.376566592144 1263.7171161795095 1177.7203185198427 1.4133832247583846 1.2240756467378278 0.8959656478672331 1.0767896467308218 1.3420091510122802 1.288613631954622 1.4072238286835883 1.2158970753142226 1.2408519608703024 1.0730197113078148 1.0 10.201781257624129 -10.597390059768777 0.8703325602136827 0.9992610374800979 1.2280787509428612 0.21758584094342703 0.1418006562255864 0.7094241017149573 0.9547072019283002 0.1025157721085099 0.02773458204281878 2.527027337894886e-11 10.597390059768777 0.22881771346276336 KDWSLSKS(ph)QVIAEK ddPTM_A549_PD325901_60min_R1 1 KDWSLSKSQVIAEK 14 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KDWS(0.015)LS(0.103)KS(0.882)QVIAEK 77.514 0.00014679 5373300.0 2220.3 2598.2 2282.1 2461.1 2167.9 1873.0 2088.3 2176.6 2987.5 2720.8 2785.4 True False 2445.703221501529 2817.159432383692 2436.9770293821143 2613.1165574363617 2015.6341828489888 1857.7469089911697 2167.771399261609 2133.1860054903314 2861.9457643111014 2549.0082236653675 2442.8134581053846 1.0011829652348425 1.1532437825066861 0.9976107759256423 1.0697159657303763 0.8251281636594099 0.7604947904749202 0.887407670065362 0.873249653350446 1.1715776965347122 1.0434723188574317 1.0 11.25432798316631 -11.812278223152092 13.21874534419655 0.9999358515857364 1.0215812059239913 0.0 0.132045287297092 0.8134657783966827 3824.644107251004 0.14482251491606155 0.021265368909364823 1.5407131058581432e-12 11.812278223152092 0.021645354338254874 KDYDT(ph)LSK ddPTM_A549_MK2206_60min_R1 4 KDYDTLSK 8 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 KDYDT(0.94)LS(0.06)K;KDYDT(0.999)LS(0.001)K;KDYDT(0.989)LS(0.011)K;KDYDT(0.852)LS(0.148)K 105.03 0.0019215999999999997 828124000.0 43260.7 39658.8 41806.4 39175.600000000006 58088.9 44102.7 40106.5 42188.899999999994 64033.1 60042.1 60279.600000000006 True False 50562.04853743149 41677.263523569294 47735.17615812549 48773.623758659545 49544.09975990052 48769.61844099706 47393.33190305518 48169.30577308754 49529.70508984884 46478.547908950546 45310.51168767469 1.1159010713883708 0.9198144530092847 1.0535121847037174 1.0764306546537388 1.0934350091079956 1.0763422575574955 1.0459677045745448 1.0630933966298706 1.0931173196907826 1.0257784822499276 1.0 15.46755816272259 KDYDT(ph)LSK ddPTM_A549_PD325901_60min_R1 2 KDYDTLSK 8 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 KDYDT(0.998)LS(0.002)K;KDYDT(0.992)LS(0.008)K 95.40100000000001 0.0015505 1062920000.0 18735.9 19074.6 23249.0 22985.0 20898.7 23953.0 23526.0 25266.0 24606.0 23517.0 25682.0 True False 20637.95477535942 20682.083484314517 24826.816947594216 24404.731247277537 19430.84740860102 23757.934709591853 24421.29480392116 24762.049809206434 23571.895389669957 22032.132606563668 22523.27681161143 0.9162945049238985 0.9182537539854004 1.1022737568449739 1.0835337793609214 0.8627007327185994 1.0548169748259684 1.0842691766471229 1.0993981922044684 1.0465571056480525 0.9781939275907419 1.0 14.45912911353766 KDYDT(ph)LSKCS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KDYDTLSKCSPK 12 2 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 2 KDY(0.007)DT(0.891)LS(0.233)KCS(0.869)PK 42.647 0.039936 6482400.0 1342.7 1551.0 1797.6 1615.1 1632.1 1709.7 1577.2 1779.1 1527.2 1545.4 2052.3 True False 1479.0099155565033 1681.7082132349726 1919.595945846934 1714.8610588417641 1517.466926439335 1695.7767700492282 1637.2212090769563 1743.6144548230486 1463.0170949810597 1447.8231802603868 1799.8801106015958 0.8217269066116608 0.9343445729131785 1.0665132274867597 0.952764047305676 0.843093335773422 0.942160958422074 0.9096279243453209 0.9687392202140948 0.8128414144717994 0.8043997884817247 1.0 10.813685096994295 KDYDT(ph)LSKCSPK ddPTM_A549_PD325901_60min_R1 1 KDYDTLSKCSPK 12 2 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 KDY(0.011)DT(0.446)LS(0.297)KCS(0.245)PK 47.201 0.012412999999999999 24965000.0 3411.4 3217.6 3645.8 2900.5 3064.8 3587.3 3571.5 4572.5 2483.1 3456.4 3689.5 True False 3757.722816660055 3488.7584441681834 3893.225911976386 3079.657297486557 2849.5390209860157 3558.0862181655248 3707.4153868997896 4481.297900443144 2378.743942212851 3238.162314127085 3235.714889667486 1.1613269230424106 1.078203291429889 1.203204251526768 0.9517702895643669 0.8806520716906688 1.0996290895491 1.1457793759081094 1.3849483199997445 0.7351525160046778 1.0007563782790054 1.0 11.659868777045538 -8.787009660762983 24.999999463655424 0.8749331535741476 1.1025261396307624 0.2757783254881797 0.1410333058048462 197.96185377590197 193545.87302784564 0.027034061095922893 0.02878497058540146 1.6330156215006214e-09 8.787009660762983 0.22759298605661482 KDYDTLS(ph)KCSPK ddPTM_A549_PD325901_60min_R1 1 KDYDTLSKCSPK 12 2 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 KDYDT(0.055)LS(0.526)KCS(0.418)PK 77.146 0.00022533 24158000.0 3984.1 4303.4 4937.2 4167.3 3724.3 4434.1 4838.3 4757.1 3136.8 3775.5 4875.1 True False 4388.562899060597 4666.062620783616 5272.26808179544 4424.704656375016 3462.718016137501 4397.990159721168 5022.424154119348 4662.215908627246 3004.971204515837 3537.11428566914 4275.4936058051135 1.0264459039540985 1.0913506254454928 1.233136701371028 1.0348991401524514 0.8098990047455445 1.0286508565349586 1.1747004246012855 1.0904509136201384 0.7028360890157324 0.827299631758675 1.0 12.061875273441517 -8.735481566884983 24.998470854313915 0.8596725737060981 1.0613746269135382 0.3975431220376221 0.11895693930407156 210.9915664932409 203193.71498251497 0.02485581114270067 0.028179262117111813 1.8387319950100343e-09 8.735481566884983 0.20170205320744017 KDYDTLSKCS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KDYDTLSKCSPK 12 2 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 KDYDT(0.094)LS(0.077)KCS(0.829)PK 56.648 0.005224100000000001 2676600.0 1519.6 1471.9 1505.6 1273.4 1545.1 1336.7 1759.9 1796.0 1159.1 1262.7 1930.9 True False 1673.868673329605 1595.9421786335 1607.7790699082916 1352.0550258987691 1436.577506305629 1325.8143583814717 1826.873957554231 1760.1773710652556 1110.3870578788271 1182.97290650627 1693.41154098359 0.9884594694313741 0.9424420112942679 0.9494319785812018 0.7984208168992698 0.8483333622913759 0.7829250753844482 1.078812747722932 1.0394268188599245 0.6557101041332677 0.6985737830859235 1.0 10.725716911164971 -8.726650428026225 24.99975651649426 0.8374182838300026 0.9228373390550842 0.1833579132834141 0.12160057911812255 409.10372286565735 293986.6625848156 0.025298241468885308 0.02868492552314845 1.8765043347391054e-09 8.726650428026225 0.08541905522508164 KEASEVCPPPGYGLDGLQYS(ph)PVQGGDPSENKK ddPTM_A549_PD325901_60min_R1 1 KEASEVCPPPGYGLDGLQYSPVQGGDPSENKK 32 2 E9PHH8;Q9Y6X2 E9PHH8 PIAS3 E3 SUMO-protein ligase PIAS3 1 KEASEVCPPPGY(0.025)GLDGLQY(0.111)S(0.863)PVQGGDPS(0.001)ENKK 63.625 0.00022522 3509200.0 899.16 654.27 832.87 631.7 1095.9 654.44 977.42 727.47 738.01 601.5 880.5 True False 990.4420612733933 709.407629060765 889.3935666541707 670.7186743052084 1018.9277646497565 649.1104576188906 1014.6162529647461 712.9600401608257 706.9940061989073 563.5211873473676 772.2040819493759 1.2826169718930915 0.9186789420614229 1.1517597322316118 0.8685769603963054 1.3195057996553756 0.8405944397240895 1.3139224159543645 0.9232792947183175 0.9155533138521487 0.729756809786342 1.0 9.592838370307483 KECET(ph)LRQNQGEGQHLQNS(ph)FK ddPTM_A549_PD325901_60min_R1 1 KECETLRQNQGEGQHLQNSFK 21 2 Q9P219 Q9P219 CCDC88C Protein Daple 2 KECET(1)LRQNQGEGQHLQNS(1)FK 43.11600000000001 0.009822200000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KECSEAMEVETSVISIDS(ph)PQK ddPTM_A549_MK2206_60min_R1 4 KECSEAMEVETSVISIDSPQK 21 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KECSEAMEVETSVIS(0.001)IDS(0.999)PQK;KECSEAMEVETSVISIDS(1)PQK;KECSEAMEVETSVISIDS(1)PQK;KECSEAMEVETSVIS(0.005)IDS(0.995)PQK 161.39 4.6252999999999995e-28 37094800.0 5868.360000000001 5569.3 5822.26 5420.72 8714.3 7327.5 7199.499999999999 7503.700000000001 9699.3 7491.799999999999 8564.8 True False 6858.795700372899 5852.753581596379 6647.944016667486 6748.796643345364 7432.438013763407 8102.891186399158 8507.555958162531 8567.372454117476 7502.424036599362 5799.397176718925 6437.923783545282 1.0653738582465553 0.909105758063719 1.0326223546881674 1.0482877508731376 1.154477478090065 1.2586186880791248 1.3214750972832314 1.3307663685014197 1.1653483776516336 0.9008179300819978 1.0 12.652379781988376 -6.503000045943665 2.6134705307046464 1.135934102462614 0.992655516513556 0.2270935881420444 0.1267217250687657 0.38997135763646257 5.295103873113939 0.019687114371787582 0.04905824142377414 3.1405083616443387e-07 6.503000045943665 -0.14327858594905796 KECSEAMEVETSVISIDS(ph)PQK ddPTM_A549_PD325901_60min_R1 3 KECSEAMEVETSVISIDSPQK 21 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KECSEAMEVETSVIS(0.051)IDS(0.949)PQK;KECSEAMEVETSVIS(0.003)IDS(0.997)PQK;KECSEAMEVETSVIS(0.002)IDS(0.998)PQK 196.22 8.9827e-56 44049000.0 6293.6 7089.1 6743.9 6740.3 7225.1 6336.8 5714.5 7046.500000000001 5783.4 6856.200000000001 7795.3 True False 6932.521638896558 7686.523336198611 7201.581608365124 7156.633022668037 6717.633901241867 6285.195201759346 5931.968424594383 6905.952029627687 5540.343810315253 6423.298361913587 6836.5275184781085 1.0140413565452624 1.1243315141236676 1.0533975894780399 1.0468228209898565 0.9826090633124945 0.919354918819738 0.8676873469113028 1.0101549377168357 0.8104032047469325 0.9395556946933037 1.0 12.739048006856022 -6.926539663496809 1.9206245338483894 0.9133877207661395 1.0687199610744407 0.5408239100557912 0.057729352554218814 0.22877126371066606 1.699735572385133 0.011277258460081412 0.024259757778463748 1.1842962019716969e-07 6.926539663496809 0.15533224030830117 KEDALLYQS(ph)K ddPTM_A549_MK2206_60min_R1 2 KEDALLYQSK 10 1 P50402;Q5HY57 P50402 EMD Emerin 1 KEDALLY(0.036)QS(0.964)K;KEDALLYQS(1)K 88.552 0.00029336 11946200.0 3640.1000000000004 3541.0 3292.3 2775.1000000000004 4455.8 3349.4 3518.8 3089.1 5425.700000000001 5183.0 4965.5 True False 4254.4598880994645 3721.2217751661374 3759.1976459440784 3454.9996245789725 3800.3577225625672 3703.831284848221 4158.120411915038 3526.9893849719847 4196.787613062507 4012.156700250166 3732.4293091717386 1.139863487205219 0.9969972548500622 1.0071718268599386 0.9256704784974668 1.0181995177306928 0.9923379595553911 1.1140520201406745 0.9449581205208832 1.1244118147796385 1.0749451276655262 1.0 11.865899221171095 KEDALLYQS(ph)K ddPTM_A549_PD325901_60min_R1 2 KEDALLYQSK 10 1 P50402;Q5HY57 P50402 EMD Emerin 1 KEDALLY(0.074)QS(0.926)K;KEDALLY(0.06)QS(0.94)K 76.548 0.00061286 16480800.0 6541.7 6555.6 7525.4 7537.9 8284.6 8074.8 7633.0 8522.4 8401.599999999999 7472.0 7463.9 True False 7205.808568254985 7108.0634188802 8036.118897906391 8003.498963187005 7702.71827631844 8009.041505991405 7923.4779919378725 8352.414046306536 8048.509969351007 7000.2166448205 6545.8876175604155 1.100814586080614 1.0858822873481138 1.2276591605923979 1.2226758891668577 1.1767263244261386 1.2235226105174553 1.2104512718308584 1.275978833473984 1.2295521157068998 1.0694067869483845 1.0 12.676373118486858 -10.726651048626904 0.9818294318899773 1.0000147245878401 1.1972395361523454 0.5285502225625367 0.05711067971186793 0.2933334071927458 0.5026264262144515 0.040116107267178944 0.010381328403331348 1.8765016532428407e-11 10.726651048626904 0.19722481156450522 KEDESQMEDPS(ph)TSPSPGTR ddPTM_A549_MK2206_60min_R1 1 KEDESQMEDPSTSPSPGTR 19 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314 Q9UI08-4 EVL Ena/VASP-like protein 1 KEDES(0.001)QMEDPS(0.371)T(0.371)S(0.212)PS(0.036)PGT(0.009)R 57.496 0.0016628 10793000.0 890.03 889.56 764.97 829.67 1143.4 707.69 711.28 928.87 1054.4 1123.6 1164.2 True False 1040.2453048556813 934.8348043820354 873.4542487676822 1032.939187245301 975.2073746528208 782.5772860733972 840.510369042551 1060.540167045071 815.5800835308087 869.7779796259091 875.0970097145788 1.188719985679036 1.0682641970025022 0.9981227670433562 1.1803710626119084 1.1143991624093128 0.8942748945384263 0.9604767925291979 1.2119115426882516 0.9319881961393262 0.9939217823514166 1.0 9.7732991469213 -6.698682667663426 0.42546301524180485 0.9732250403567918 1.1527328987131928 0.16407641544380303 0.09607284543340422 2.2003485424726716 0.5603617632304133 0.027047051596829 0.1656757911285454 2.0013236721117597e-07 6.698682667663426 0.17950785835640104 KEDESQMEDPS(ph)TSPSPGTR ddPTM_A549_PD325901_60min_R1 1 KEDESQMEDPSTSPSPGTR 19 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314 Q9UI08-4 EVL Ena/VASP-like protein 1 KEDESQMEDPS(0.332)T(0.332)S(0.332)PS(0.004)PGTR 97.542 3.7528e-07 13599000.0 2041.4 2216.5 1751.5 2278.8 2544.2 2315.6 1947.7 2227.1 2340.8 3076.5 2834.6 True False 2248.64142520075 2403.2922338074254 1870.3673226251142 2419.5563004697015 2365.5041690135135 2296.742521334732 2021.8207893223357 2182.6787433738477 2242.424316351274 2882.2492649612254 2485.962170009883 0.904535657190556 0.9667452959663788 0.7523715948652906 0.973287658862517 0.9515447167903242 0.9238847433167502 0.8132950749263808 0.8780015921823825 0.9020347708438214 1.159409945868069 1.0 11.279588627088527 -10.416908690812061 0.8143905235197136 0.9988276754609122 0.8961791287033066 0.3630794280819579 0.08000967447664761 0.6368743847398247 0.7780809879681873 0.0378675095751927 0.011816684962559516 3.8290523959938715e-11 10.416908690812061 -0.1026485467576056 KEDESQMEDPST(ph)SPSPGTR ddPTM_A549_MK2206_60min_R1 1 KEDESQMEDPSTSPSPGTR 19 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314 Q9UI08-4 EVL Ena/VASP-like protein 1 KEDESQMEDPS(0.132)T(0.425)S(0.425)PS(0.016)PGT(0.003)R 72.082 0.00023740000000000002 12875000.0 1078.9 1534.0 975.12 1023.4 1420.0 1417.8 1008.3 934.14 1244.0 1586.6 1585.7 True False 1260.9919434275196 1612.0740477562422 1113.40667876955 1274.1330459421717 1211.1198810626258 1567.8306549405281 1191.4950583533964 1066.5572056837696 962.2359862597937 1228.185958058444 1191.92692690638 1.0579440022387918 1.3524940257372529 0.9341232701734261 1.0689690929704525 1.0161024587355039 1.3153748099388927 0.9996376719551889 0.8948176113883048 0.8072944444314686 1.0304205151620942 1.0 10.219080076316805 -7.9951269024770095 24.982149150228757 0.907385900384581 1.1217385256705956 0.32850140102233105 0.12715312090005512 106.76876609070544 547349.7860908161 0.019864427647137646 0.02739473291932061 1.0112839101297482e-08 7.9951269024770095 0.21435262528601462 KEDESQMEDPSTS(ph)PSPGTR ddPTM_A549_PD325901_60min_R1 1 KEDESQMEDPSTSPSPGTR 19 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314 Q9UI08-4 EVL Ena/VASP-like protein 1 KEDESQMEDPS(0.048)T(0.188)S(0.755)PS(0.009)PGT(0.001)R 91.416 1.2291e-06 17105000.0 1397.9 1556.4 1819.2 1408.9 1784.3 1482.6 1477.9 1670.8 1710.7 1811.4 1919.1 True False 1539.81377892041 1687.5632901862757 1942.6618517382853 1495.9245531559422 1658.9769235008307 1470.526197154464 1534.1422932379105 1637.4745832827555 1638.805228119499 1697.0278948645428 1683.0628661772248 0.9148878570518406 1.002673948846173 1.1542420017564128 0.888810859783073 0.9856892198381746 0.8737203028514914 0.9115181162082432 0.9729134996614743 0.973704108772687 1.0082973898170762 1.0 10.716873350235616 -5.246619858595804 22.122537651563643 0.979410495629676 0.9148876252983047 0.05795858862516812 0.07164807216333186 1191.084357020885 1777891.0523377103 0.009414588131343443 0.2474520658266152 5.667351397579019e-06 5.246619858595804 -0.06452287033137127 KEDGKQAENDS(ph)SNDDKTK ddPTM_A549_PD325901_60min_R1 3 KEDGKQAENDSSNDDKTK 18 3 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 KEDGKQAENDS(0.873)S(0.127)NDDKTK;KEDGKQAENDS(0.973)S(0.027)NDDKTK;KEDGKQAENDS(0.968)S(0.032)NDDKTK 101.94 1.2655e-09 27162600.0 3151.21 2647.13 2698.9300000000003 3403.16 3790.43 3629.41 3143.51 3729.42 3458.15 3841.92 4339.0 True False 3471.1185194018058 2870.2129352035413 2882.095619784529 3613.3654640628706 3524.2032730736164 3599.8532882870504 3263.1379932446766 3655.0337924266096 3312.8159815405634 3599.3405155338287 3805.3305071872146 0.9121726779962542 0.7542611423061688 0.7573837842313694 0.9495536477681045 0.9261227812978067 0.9460027930525154 0.8575176287792909 0.9605036370752196 0.8705724707180026 0.9458680418785365 1.0 11.893806047293017 -14.99999999998706 0.045926826729960867 1.496452742673378 0.6046852366676894 0.3040677793996024 0.06431478846752732 382.06179121960395 1.3432115059966652 25.087172565097678 6.607090097311634 1.0000000000297971e-15 14.99999999998706 -0.8917675060056887 KEDGS(ph)ADGDPVQIDFIDSHVPGEDEER ddPTM_A549_PD325901_60min_R1 1 KEDGSADGDPVQIDFIDSHVPGEDEER 27 1 O75427 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 KEDGS(1)ADGDPVQIDFIDSHVPGEDEER 88.242 2.2357e-09 2031900.0 788.92 736.86 770.44 836.68 1196.2 927.71 636.54 748.32 945.1 1134.6 616.49 True False 869.0105776277913 798.957778210395 822.726691432083 888.359823361852 1112.1830386659726 920.1550373412704 660.7638780280531 733.3941705543165 905.3807336737809 1062.9611623679532 540.6656382520964 1.607297590498247 1.4777298975265458 1.521692212754364 1.6430854127031393 2.057062553968696 1.7018929486919405 1.2221303357916717 1.3564652877243817 1.6745668110160694 1.966023152135897 1.0 9.078592859309905 -11.344501860167664 0.47529213231670997 0.6945260649716395 1.6107228858513571 0.0 0.35452665566916336 1.7933636362535628 0.36627856253615104 0.8438739682152216 0.05230812915977756 4.523745247203487e-12 11.344501860167664 0.9161968208797177 KEDKPEGQS(ph)PVK ddPTM_A549_MK2206_60min_R1 3 KEDKPEGQSPVK 12 2 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK 93.75399999999999 5.4146999999999995e-05 100322500.0 10449.5 10485.4 11059.2 8315.699999999999 13891.1 11443.0 10813.199999999999 12410.1 15482.199999999999 12718.300000000001 14021.9 True False 12213.12013425328 11019.062073235524 12627.560855944099 10353.046873305962 11847.737591428895 12653.890664751361 12777.81847167207 14169.269679337294 11975.506419993066 9845.227196757029 10539.875245247254 1.158753766061941 1.0454641840475625 1.1980749830637933 0.9822741382042887 1.1240870803258696 1.2005730969593194 1.212331092574741 1.3443488987904901 1.1362095035606024 0.9340933329544424 1.0 13.36357017023157 -10.238231109195743 1.0546118383257328 1.0130443153148825 1.1529726286022157 0.3606581713950684 0.09233521274070675 0.4690318255316749 1.0338559310243405 0.03764193358874323 0.01717766364258382 5.7778849624851596e-11 10.238231109195743 0.13992831328733324 KEDKPEGQS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 KEDKPEGQSPVK 12 2 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK 96.163 5.2829e-05 130310000.0 5368.9 5521.2 5097.0 4486.2 6988.200000000001 5679.700000000001 5053.8 6330.799999999999 5762.4 6012.700000000001 6846.4 True False 5913.946775624714 5986.490900653085 5442.913070750901 4763.302385100566 6497.37293998123 5633.446406298533 5246.125124545475 6204.527227583474 5520.226367285791 5633.057095866197 6004.336202905406 0.984945975004372 0.9970279308737433 0.9064970525996128 0.7933104050362266 1.0821134460853892 0.9382296753423958 0.8737227475714894 1.0333410751685088 0.9193732963544976 0.9381648371289482 1.0 12.551789045212402 -10.99895597140451 1.1843709239012927 1.001041581379415 0.944454100222889 0.0 0.07672185297685721 1.1747666280196374 2.840512012271172 0.05594351171551914 0.011791388209665065 1.0024068565205586e-11 10.99895597140451 -0.0565874811565259 KEDKPEGQS(ph)PVKAEWPSETPVLCQQCGGK ddPTM_A549_MK2206_60min_R1 2 KEDKPEGQSPVKAEWPSETPVLCQQCGGK 29 3 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 KEDKPEGQS(0.999)PVKAEWPS(0.001)ETPVLCQQCGGK;KEDKPEGQS(0.998)PVKAEWPS(0.001)ET(0.001)PVLCQQCGGK 103.73 3.3333e-15 8687200.0 2099.2 2527.62 2053.38 1927.48 2988.8 2770.2 2071.0 2063.1 3006.1000000000004 2484.5 3135.3999999999996 True False 2453.4936394874862 2656.2650616620817 2344.5801604436565 2399.712686527866 2549.151479239419 3063.340725290063 2447.2738925417893 2355.5507429787654 2325.2231497552757 1923.249724439811 2356.793647362214 1.0410303177087656 1.1270673037646057 0.9948177529533707 1.0182107751409157 1.0816184446578498 1.299791659197077 1.0383912462089515 0.9994726291014745 0.9866044710183801 0.8160450222667407 1.0 11.202609731430147 -7.9957517072772015 24.99614887299869 0.9951229019589137 1.0936460668283126 0.3047767016807327 0.0925240709760512 126.17829861171533 742402.497787951 0.011876457267367302 0.016374359736409494 1.0098300561865121e-08 7.9957517072772015 0.09852316486939883 KEDKPEGQS(ph)PVKAEWPSETPVLCQQCGGK ddPTM_A549_PD325901_60min_R1 1 KEDKPEGQSPVKAEWPSETPVLCQQCGGK 29 3 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 KEDKPEGQS(0.99)PVKAEWPS(0.001)ET(0.009)PVLCQQCGGK 137.5 1.7815999999999999e-28 7317200.0 1919.5 1789.6 1630.3 1474.5 1184.0 1377.3 1431.2 1297.7 1054.3 1353.5 1836.2 True False 2114.366226938785 1940.415872601746 1740.9419617903084 1565.5765161675324 1100.8399245782566 1366.0837254423589 1485.6650991826912 1271.8163554740438 1009.9914374270103 1268.039779010245 1610.3590406308292 1.3129781456131175 1.204958536353249 1.0810893209928674 0.9721909690116348 0.6835990588453009 0.8483100296112972 0.9225676148597945 0.7897719225247014 0.6271840080031869 0.7874267458476298 1.0 10.65316666765353 -6.080075607896533 1.4474351265932528 0.8191005061502271 1.29217688198924 0.7492456541764273 0.10138513215641934 0.24204673403123178 0.9028602823726067 0.020978824321725698 0.10497224439282743 8.31618978944604e-07 6.080075607896533 0.47307637583901296 KEDLYLKPIQR ddPTM_A549_MK2206_60min_R1 1 KEDLYLKPIQR 11 2 P13639 P13639 EEF2 Elongation factor 2 0 57.175 0.004582800000000001 2888900.0 1606.9 1900.5 1652.9 1975.3 2704.3 1750.1 1592.4 1889.1 2548.6 2884.6 2817.3 False True 1878.1054350669026 1997.2273323081736 1887.3060744710285 2459.2485886745853 2306.501052364547 1935.2944203776397 1881.7184676405332 2156.885710126115 1971.3461692779013 2232.9668565582933 2117.686656475591 0.8868665386939648 0.9431174938940708 0.8912112038388253 1.1612901187031355 1.0891606864082501 0.9138719434529082 0.8885726610622492 1.0185103181014334 0.930896062101444 1.0544368543524565 1.0 11.048273421399523 -6.4890989174684 0.00186539842135547 1.9324925246728653 7.941680685109664e-05 0.009636377391743722 0.08761729372298177 1010550.5994473546 430.50610071313207 220980.00284830842 225000.56956089815 3.2426575226062645e-07 6.4890989174684 -1.932413107866014 KEDLYLKPIQR ddPTM_A549_PD325901_60min_R1 2 KEDLYLKPIQR 11 2 P13639 P13639 EEF2 Elongation factor 2 0 ; 98.105 9.2338e-05 14180800.0 6143.6 5878.5 6439.299999999999 6274.299999999999 7287.2 6255.4 6894.1 7066.1 7229.3 6949.2 7370.799999999999 False True 6767.293749320722 6373.901825597542 6876.30962065652 6661.8492610308185 6775.37221147523 6204.458096371258 7156.458748096278 6925.16109225179 6925.477661567947 6510.426326042108 6464.238327350888 1.0468818454120996 0.9860251901030439 1.063746302725584 1.0305698712938565 1.0481315614258684 0.9598127083464 1.1070846069855642 1.071303491851575 1.0713524642594792 1.0071451571480268 1.0 12.658264673863927 -7.762084589564617 24.999999692579586 1.042972997430834 1.024271617410709 0.09969159200943767 0.039479345217858494 52.53202392805714 2035583.9887187995 0.006625111417318241 0.009460262398528834 1.7294794676137318e-08 7.762084589564617 -0.018701380020125002 KEDQDRS(ph)PR ddPTM_A549_MK2206_60min_R1 1 KEDQDRSPR 9 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KEDQDRS(1)PR 42.041000000000004 0.016878999999999998 4271400.0 1199.6 1099.1 952.16 637.13 608.02 383.87 417.57 154.75 816.6 1626.9 1738.5 True False 1402.0631525958406 1155.0394953643327 1087.1906055226168 793.2268786018524 518.5810634392236 424.49086860771683 493.4370638863712 176.68628640199896 631.6414038422404 1259.3821600688784 1306.7824698409163 1.0729124280084072 0.8838804636742209 0.8319598943311262 0.6070075907112661 0.3968380931084529 0.32483667205865796 0.37759694155251466 0.13520711402220464 0.48335619616869707 0.9637274673742691 1.0 10.351803291288373 -5.882036377286235 1.8723556538671344 0.6161881973804794 1.0224000596916896 0.29629792135018473 0.2561663011574302 0.5201573593097463 3.3907126341977727 0.045729102714541475 0.24067394942938727 1.3120899914007202e-06 5.882036377286235 0.4062118623112102 KEDQDRS(ph)PR ddPTM_A549_PD325901_60min_R1 4 KEDQDRSPR 9 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KEDQDRS(1)PR;KEDQDRS(1)PR;KEDQDRS(1)PR;KEDQDRS(1)PR 68.03399999999999 0.001525 62220900.0 12825.8 13481.300000000001 10227.4 10001.3 10957.0 8996.9 7659.9 8728.4 9651.2 13351.599999999999 14898.5 True False 14127.865774145079 14617.416463626461 10921.492866352319 10619.05758639969 10187.418119597947 8923.632229312692 7951.401686158116 8554.30521470266 9245.593626952068 12508.577697401683 13066.078949372837 1.0812628508434972 1.1187301500522533 0.8358661315816206 0.8127195333462605 0.7796844148172651 0.6829617564603052 0.608553010965832 0.6546956625509491 0.7076027676532485 0.9573321687300906 1.0 13.673538641646251 -5.7927470105151375 5.595378241392937 0.8059058293324857 1.1018489263559887 0.5185604264233759 0.11643594490099897 0.13014569964295863 10.942954526613104 0.02062595437084484 0.0698789311162278 1.6115841576167355e-06 5.7927470105151375 0.2959430970235031 KEDS(ph)DEEEDDDS(ph)EEDEEDDEDEDEDEDEIEPAAMK ddPTM_A549_PD325901_60min_R1 2 KEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMK 35 1 P19338;C9J1H7;C9JWL1 P19338 NCL Nucleolin 2 KEDS(1)DEEEDDDS(1)EEDEEDDEDEDEDEDEIEPAAMK;KEDS(1)DEEEDDDS(1)EEDEEDDEDEDEDEDEIEPAAMK 217.01 1.2903999999999999e-101 229794000.0 7218.6 6698.1 6602.8 6834.8 11097.0 8462.5 9517.7 9496.6 10099.9 10204.6 9901.5 True False 7951.426957947542 7262.572393983996 7050.905713861891 7256.970073042962 10317.585002571723 8393.584205732936 9879.901281785278 9307.182863061418 9675.43632634835 9560.279814472075 8683.678270779954 0.9156749835727571 0.8363474748278167 0.8119722419458765 0.8357023195415038 1.1881583680143661 0.9665931813684108 1.1377553352051908 1.0718018992457976 1.1142094426627482 1.100948183057614 1.0 13.084090559930132 -6.741270660030693 24.949993032749845 1.0639393591010031 0.8462435268928447 0.752306171999098 0.06368000020430814 96.48376325830371 119355.92305061211 0.009270077774336617 0.019278252745828874 1.8143845536834058e-07 6.741270660030693 -0.21769583220815847 KEDSLTAS(ph)QRK ddPTM_A549_PD325901_60min_R1 1 KEDSLTASQRK 11 2 A0A0G2JNT0;E5RIQ9;D6RC42;D6RC90;E5RHJ0;D6RCL9;O75920-2;O75920 A0A0G2JNT0 SERF1A;SERF1B Small EDRK-rich factor 1 1 KEDS(0.002)LT(0.069)AS(0.93)QRK 66.533 0.0010477 7408400.0 1773.5 1410.9 1592.4 1798.2 3229.6 1863.3 1894.9 1857.8 1981.3 1804.2 2382.3 True False 1953.5444144183039 1529.8014945539815 1700.4698398790936 1909.2707299914928 3002.764037515152 1848.1259025751458 1967.011456429067 1820.744721584094 1898.0328511563464 1690.282504093301 2089.2922026439496 0.9350269014291729 0.7322104072460779 0.8138975667104819 0.9138361439224997 1.4372159306942442 0.8845703345067705 0.941472645109124 0.8714648526807235 0.9084573468251262 0.809021592075196 1.0 11.028798562526623 -6.5172457242498565 24.99976970574887 0.9778696773778541 0.8252790260584241 0.1451855798437024 0.16152789761546954 343.28065593164195 1523501.6047567732 0.021704574285862737 0.04633442753475475 3.039164976552602e-07 6.5172457242498565 -0.15259065131943006 KEDYNETAPMLEQAIS(ph)PKPQSQK ddPTM_A549_PD325901_60min_R1 1 KEDYNETAPMLEQAISPKPQSQK 23 2 A0A0A0MQS0;F8W9L8;A8MW92;A8MW92-4 A0A0A0MQS0 PHF20L1 PHD finger protein 20-like protein 1 1 KEDYNETAPMLEQAIS(0.995)PKPQS(0.005)QK 95.255 1.9829e-07 4549600.0 1130.9 1220.2 1259.9 1810.2 1336.7 1347.9 1497.9 1544.3 1210.4 1638.4 1463.2 True False 1245.708135475422 1323.0305362922727 1345.4043903941654 1922.0119427375173 1242.8148033646582 1336.923149294821 1554.903404182332 1513.4977250200866 1159.5310972793827 1534.9511443889073 1283.235675989014 0.970755535233488 1.0310113419131588 1.0484468407233432 1.4977856201326278 0.9685008191552946 1.0418375784825566 1.2117052489083415 1.1794386279461917 0.9035994860302728 1.1961568503041278 1.0 10.325570441337629 -8.762889579994477 24.993049238839674 0.954477531301747 1.121591079339528 0.0 0.16015969782971684 42.79241290014753 737489.7250745181 0.024438644680414554 0.026713476406069008 1.726276744578789e-09 8.762889579994477 0.1671135480377811 KEEADYSAFGTDT(ph)LIK ddPTM_A549_MK2206_60min_R1 1 KEEADYSAFGTDTLIK 16 1 Q9BYG5 Q9BYG5 PARD6B Partitioning defective 6 homolog beta 1 KEEADYSAFGT(0.02)DT(0.98)LIK 106.03 5.172e-07 6956000.0 1098.3 1359.9 1515.0 1086.4 1600.5 1270.8 1123.9 990.86 1890.5 2016.8 1829.7 True False 1283.6661891430574 1429.1131013974664 1729.849780884269 1352.5680487703487 1365.0685701695297 1405.275212511232 1328.0980820027598 1131.3174393814838 1462.3047685081508 1561.2034792715683 1375.334992848964 0.9333480176229519 1.039101825248482 1.257766136889267 0.9834462554963033 0.9925353294049708 1.0217694015043184 0.9656542507157806 0.8225759144235796 1.0632353398345749 1.1351441557068096 1.0 10.425567345960427 KEEADYSAFGTDT(ph)LIK ddPTM_A549_PD325901_60min_R1 2 KEEADYSAFGTDTLIK 16 1 Q9BYG5 Q9BYG5 PARD6B Partitioning defective 6 homolog beta 1 KEEADYSAFGT(0.143)DT(0.857)LIK;KEEADYSAFGT(0.122)DT(0.878)LIK 142.85 1.7932e-14 21233000.0 4338.9 3522.1 4610.5 5139.2 5668.0 5278.200000000001 4810.0 5391.3 5228.0 5017.7 5299.299999999999 True False 4779.3819338706435 3818.9197278110246 4923.396255188746 5456.636712029966 5269.899233538477 5235.216089181631 4993.047182132992 5283.76629210697 5008.2853408597275 4700.8815656739625 4647.519695030466 1.028372604634936 0.8217113596946232 1.05935995504296 1.1740965224665272 1.1339164929572034 1.1264537716278171 1.0743466428925506 1.1369002476217225 1.077625415168229 1.0114817954834179 1.0 12.182245263601912 -5.869709943506817 9.195063525999526 1.0695966931927332 0.9255419133809404 0.43568407158335154 0.06908811713411105 0.2022581668145453 15.696237177009012 0.010256575739660314 0.032031420102624976 1.3498641285227812e-06 5.869709943506817 -0.14405477981179282 KEEAKES(ph)PSAAGPEDK ddPTM_A549_MK2206_60min_R1 1 KEEAKESPSAAGPEDK 16 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 KEEAKES(0.863)PS(0.137)AAGPEDK 73.783 0.00011797 5560800.0 2376.9 2311.5 2500.7 2535.8 2947.7 2106.7 2380.4 2668.0 3163.5 3581.7 3869.1 True False 2778.062610374334 2429.1454767852383 2855.336862744085 3157.0711138363895 2514.097234794578 2329.6295956857175 2812.8878676033196 3046.1971704073226 2446.972301071429 2772.5914824013157 2908.2956882723533 0.9552201385769742 0.8352470784111536 0.9817904260072923 1.0855399354911601 0.8644572300308483 0.8010291405650066 0.967194594052536 1.0474165961497843 0.8413767248422496 0.9533389240928073 1.0 11.505958241098996 -5.761495292590346 0.003909649036962387 1.8374868272104885 1.1928493093764603e-07 0.0010649926366088636 0.08782197091163658 172849.74698949573 115.83744733487812 26528.505138087752 27926.497261323027 1.7318278022958582e-06 5.761495292590346 -1.8374867079255575 KEEAKES(ph)PSAAGPEDK ddPTM_A549_PD325901_60min_R1 1 KEEAKESPSAAGPEDK 16 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 KEEAKES(0.5)PS(0.5)AAGPEDK 63.69 0.00067639 5506800.0 2219.7 2043.3 1780.5 2370.1 2517.4 2094.8 2129.5 2074.6 2275.2 2307.3 2381.5 True False 2445.0423099432246 2215.496061961975 1901.33543701628 2516.4956941123564 2340.5865085585338 2077.7406433287274 2210.539287807112 2033.2204755077832 2179.581256221127 2161.616684233719 2088.5905975723335 1.1706661481600136 1.0607612925851289 0.9103437692510399 1.2048774408145841 1.1206535695789817 0.9948051311462296 1.0583880298879662 0.9734892409604307 1.0435655789864018 1.0349642896727904 1.0 11.028314009840297 -7.266099188503198 24.809696358357062 1.018668851856719 1.0876605092342315 0.20768940481738585 0.07342608262416159 482.5215937369743 2569027.5937633016 0.010680576968832891 0.017429595806961483 5.4187711696998656e-08 7.266099188503198 0.06899165737751245 KEEASS(ph)PGAGEGPAEEGTR ddPTM_A549_MK2206_60min_R1 2 KEEASSPGAGEGPAEEGTR 19 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 KEEAS(0.159)S(0.841)PGAGEGPAEEGTR;KEEAS(0.228)S(0.772)PGAGEGPAEEGT(0.001)R 120.54 1.5307e-14 34636000.0 2263.8 2216.29 2395.88 2063.2 2328.59 1861.51 1571.92 2051.66 2722.3999999999996 3362.9 3583.7 True False 2645.874095403854 2329.0896944600267 2735.6518105775585 2568.684092620568 1986.0574956645198 2058.4937526296667 1857.517516737947 2342.489087945235 2105.7807467794696 2603.218554364516 2693.768384911642 0.9822203386987337 0.8646213637021444 1.0155482653596035 0.9535653128191358 0.737278493128378 0.7641687994260082 0.6895609611955837 0.8695955825549088 0.7817230161933693 0.9663854431382021 1.0 11.395410095260237 -6.624649647831787 19.19389743041409 0.8567898808472569 0.952144711067183 0.25124059029587587 0.09617100727195119 3.894514878067754 719.8949865757177 0.016678628654111596 0.03471937828336156 2.3732875018536457e-07 6.624649647831787 0.09535483021992608 KEEASS(ph)PGAGEGPAEEGTR ddPTM_A549_PD325901_60min_R1 2 KEEASSPGAGEGPAEEGTR 19 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 KEEAS(0.173)S(0.827)PGAGEGPAEEGTR;KEEAS(0.186)S(0.814)PGAGEGPAEEGTR 122.79 1.0091e-14 55705000.0 5649.4 4889.4 5953.700000000001 5594.7 6963.4 5672.8 5825.799999999999 6446.2 6226.3 6179.5 7030.299999999999 True False 6222.92292913153 5301.446897350792 6357.753884506505 5940.27191251441 6474.314806425872 5626.602597610843 6047.504007000084 6317.625484053927 5964.63026354149 5789.32531539993 6165.61766874355 1.0092943259648564 0.8598403569891058 1.031162525165481 0.9634512277056159 1.0500675121727472 0.9125772793429553 0.980843174505899 1.024654109851958 0.9674019026153762 0.9389692365695614 1.0 12.590029715056035 -4.150175515677632 0.003822362210266566 1.9027250155000426 0.021108322461529105 0.0 0.054399848396010184 134180.11476437922 56.91665833620652 13468.306203391729 14568.898597562316 7.076597331347684e-05 4.150175515677632 -1.8816166930385134 KEEELQAALAR ddPTM_A549_MK2206_60min_R1 2 KEEELQAALAR 11 1 P35749-3;P35749-2;P35749;P35749-4;P35579;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5;A0A0C4DFM8 P35749-3;P35579;Q7Z406 MYH11;MYH9;MYH14 Myosin-11;Myosin-9;Myosin-14 0 ; 73.46600000000001 0.0015103 7114700.0 2551.4 2700.8 2314.62 2534.79 3625.3 3362.5 2618.1 2708.3 3772.3 3616.9 3266.8999999999996 False True 2982.0139442589407 2838.2591839504935 2642.8679206800957 3155.813663791046 3092.0231724058717 3718.3175181531433 3093.774880764681 3092.209818820897 2917.880073125256 2799.839777953853 2455.6385681468455 1.2143537664459008 1.1558130829051092 1.076244670108168 1.2851295401230767 1.2591523901415491 1.514195764142596 1.2598657314213006 1.259228397424317 1.188236783284945 1.1401676998691057 1.0 11.261882518695131 -9.942780899843031 0.7897442296954577 1.0159940263118747 1.2516157186500787 0.2653065847703494 0.10830935850786026 0.4222078188981661 0.5375546933775408 0.04862324480228954 0.022982017635579395 1.1408251850101041e-10 9.942780899843031 0.23562169233820396 KEEELQAALAR ddPTM_A549_PD325901_60min_R1 2 KEEELQAALAR 11 1 P35749-3;P35749-2;P35749;P35749-4;P35579;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5;A0A0C4DFM8 P35749-3;P35579;Q7Z406 MYH11;MYH9;MYH14 Myosin-11;Myosin-9;Myosin-14 0 ; 132.59 7.4511e-08 14338000.0 4834.3 5131.9 5060.2 5400.7 6564.1 5809.3 5201.3 5532.4 5090.2 5670.6 6002.3 False True 5325.074577176438 5564.383223404617 5403.615601454529 5734.288973120376 6103.060260915659 5761.990986867275 5399.238317760573 5422.051941916157 4876.276595647322 5312.557348249353 5264.055151714641 1.011591714695831 1.057052607359585 1.0265119657217932 1.0893291973304207 1.1593837991852596 1.094591682799988 1.0256804235802695 1.0300142733402122 0.9263346327325219 1.00921384657585 1.0 12.361958888987596 -8.348295075922975 2.111952229579756 0.9659007684555614 1.0726376136423654 0.4166224399819184 0.04412273130826794 0.19650082282636644 1.7123755665477527 0.008373068109778916 0.01043658359570446 4.484405990773483e-09 8.348295075922975 0.10673684518680404 KEEENADS(ph)DDEGELQDLLSQDWR ddPTM_A549_MK2206_60min_R1 1 KEEENADSDDEGELQDLLSQDWR 23 1 J3QQQ3;Q96NB3 J3QQQ3 ZNF830 Zinc finger protein 830 1 KEEENADS(1)DDEGELQDLLSQDWR 55.413000000000004 0.002132 1631200.0 720.67 815.96 529.35 289.05 942.36 970.43 568.73 920.66 1240.7 1013.2 1341.1 True False 842.30147731014 857.4888787530529 604.4197897762954 359.86726297594777 803.7400923367434 1073.1202584807008 672.0608792396389 1051.1663744030006 959.6834309907756 784.3174163020396 1008.0678575229518 0.8355602958910554 0.8506261481842053 0.5995824440444812 0.35698714158015327 0.7973075287924689 1.0645317678490387 0.6666821823791136 1.0427535870312852 0.9520028079745866 0.7780402980304153 1.0 9.977377040976911 -7.002795538757051 24.99805744492599 0.9605845723876977 0.6582982065800111 0.32789950181261707 0.16556591658195577 80.15512777994823 716770.5841155243 0.02245850935615664 0.04190633253861073 9.935837070152584e-08 7.002795538757051 -0.30228636580768653 KEEENADS(ph)DDEGELQDLLSQDWR ddPTM_A549_PD325901_60min_R1 2 KEEENADSDDEGELQDLLSQDWR 23 1 J3QQQ3;Q96NB3 J3QQQ3 ZNF830 Zinc finger protein 830 1 KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR 298.18 3.677899999999999e-157 187461000.0 3797.4 3947.4 3759.0 3850.7999999999997 4059.0 3471.24 3602.2 3428.9 4142.99 3990.6 5663.8 True False 4182.909252501873 4280.061251401505 4014.1083447032847 4088.655170198666 3773.9098427898207 3442.9713723259533 3739.2836921994763 3360.507899579986 3968.8745379358143 3738.632834959944 4967.1885057863465 0.8421080149523507 0.861666765095708 0.8081248255481334 0.8231326766511348 0.759767791859226 0.6931428852187084 0.7527968161150987 0.6765412457500423 0.7990183044819856 0.7526657848005485 1.0 12.27821378303834 -10.32742887677929 0.8560390122769341 0.9920961830848477 0.7789056173226564 0.0 0.08946937267784118 0.2773168795668797 0.38775068877245844 0.033623952035406544 0.012036511350800421 4.7051245395585185e-11 10.32742887677929 -0.2131905657621913 KEEENAS(ph)VIDSAELQAYPALVVEK ddPTM_A549_PD325901_60min_R1 2 KEEENASVIDSAELQAYPALVVEK 24 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 KEEENAS(0.999)VIDS(0.001)AELQAYPALVVEK;KEEENAS(0.999)VIDS(0.001)AELQAYPALVVEK 112.9 3.3029e-12 5048400.0 1831.92 1988.62 1777.54 2374.0 2108.33 1957.17 1443.0700000000002 1402.19 2476.7 2170.8 2063.79 True False 2017.8951698117737 2156.207986462498 1898.1745536163548 2520.636588254812 1960.2481741436463 1941.2314564176443 1497.9868185282037 1374.2222204532243 2372.6129119562543 2033.735317528954 1809.9569134427063 1.1148857493925364 1.191303489297538 1.0487401879671547 1.3926500512436657 1.0830358223362744 1.0725290983448006 0.8276367284781898 0.7592568697336147 1.3108670677929697 1.1236374205508575 1.0 10.821739638599071 KEEGTGT(ph)LKK ddPTM_A549_PD325901_60min_R1 2 KEEGTGTLKK 10 2 Q9Y4G6 Q9Y4G6 TLN2 Talin-2 1 KEEGT(0.334)GT(0.666)LKK;KEEGT(0.014)GT(0.986)LKK 76.72800000000001 0.00050175 36726000.0 11221.4 11433.3 12088.400000000001 11366.5 13266.4 10153.2 9966.8 11026.0 12114.8 12495.7 12822.6 True False 12360.588267241923 12396.82431616984 12908.791517454436 12068.58288980553 12334.613830595426 10070.515705482732 10346.092028042227 10806.07778027033 11605.657086351841 11706.719369470504 11245.501489158505 1.099158474982947 1.1023807455915857 1.1479071457950956 1.073192058303539 1.0968487125707027 0.8955150390750874 0.9200205111365308 0.9609244897338005 1.032026637277186 1.041013544905636 1.0 13.457060378574452 -7.086628327796381 12.29143513647796 0.9955524607507336 1.1055222479880626 0.6486961034546064 0.045945321533476545 0.5791714451863235 80.92559297833161 0.00746964115424945 0.012941265818239085 8.191655357373959e-08 7.086628327796381 0.10996978723732909 KEEIPVQEKT(ph)PK ddPTM_A549_MK2206_60min_R1 3 KEEIPVQEKTPK 12 2 Q96B01-2;Q96B01;H0YGT5;Q96B01-3;F5H1Y0;H0YFK6;F5H4V6;F5H031;F5H710 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 KEEIPVQEKT(1)PK;KEEIPVQEKT(1)PK;KEEIPVQEKT(1)PK 89.35799999999999 9.510299999999999e-05 79698000.0 9793.099999999999 11007.7 11779.7 10089.2 15486.5 11923.5 9789.5 11975.7 15827.9 17437.0 16544.7 True False 11445.93586169249 11567.944912311856 13450.238590021401 12561.054452921393 13208.456364842497 13185.236855821275 11568.125432659506 13673.292149043096 12242.905921962527 13497.969589477549 12436.194379509352 0.9203728658786103 0.9301836686769646 1.0815397524006902 1.0100400548272042 1.0620979346065522 1.0602308434118795 0.9301981843995515 1.0994755897006614 0.9844575879366039 1.0853778235983222 1.0 13.602257451048574 -5.627205502951858 10.063247250955627 1.0101981827343893 0.9228808768862213 0.31385678639092474 0.05315845328795216 0.2444966158421992 21.286020400904494 0.006364737724963127 0.024709786636410925 2.3593615473492873e-06 5.627205502951858 -0.08731730584816799 KEEIPVQEKT(ph)PK ddPTM_A549_PD325901_60min_R1 3 KEEIPVQEKTPK 12 2 Q96B01-2;Q96B01;H0YGT5;Q96B01-3;F5H1Y0;H0YFK6;F5H4V6;F5H031;F5H710 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 KEEIPVQEKT(1)PK;KEEIPVQEKT(1)PK;KEEIPVQEKT(1)PK 76.15100000000001 0.00040798 144920300.0 8022.0 8497.8 8346.8 9533.5 10867.8 9569.8 9193.9 10799.400000000001 9630.7 9178.7 9998.9 True False 8836.387534515728 9213.939429031698 8913.264041385846 10122.362642850569 10104.48321987464 9491.86672165708 9543.77889559512 10583.997495034597 9225.955170661395 8599.155315553255 8769.098688249416 1.0076734050623104 1.0507282169578462 1.0164401563104326 1.154321898146103 1.1522829858688486 1.0824221575218638 1.088342055995307 1.2069652619165003 1.0520984537469245 0.9806202006913338 1.0 13.09821285084228 -9.260318260371255 2.3663696665280796 1.017753130894301 1.0947027471406097 0.28756572950420656 0.05882106035143301 0.2795333737127343 3.2181843052098893 0.012160157131600782 0.01114468046917989 5.491383059658106e-10 9.260318260371255 0.07694961624630858 KEEITGT(ph)LR ddPTM_A549_MK2206_60min_R1 2 KEEITGTLR 9 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 KEEIT(0.063)GT(0.937)LR;KEEIT(0.001)GT(0.999)LR 104.59 0.00037249 36293000.0 6089.5 5270.7 5076.5 4758.2 8538.2 6800.9 6000.0 7239.9 9107.099999999999 7554.5 7700.3 True False 7117.25872601898 5538.956117020092 5796.424034758412 5923.9592136037145 7282.24209048515 7520.566723927942 7090.122334742024 8266.17799626386 7044.35639105029 5847.933203171886 5788.102992531499 1.2296358124937508 0.9569553486119916 1.001437611292966 1.0234716315945853 1.2581396875421131 1.2993145999011895 1.2249475076532925 1.428132499876016 1.2170406090112356 1.0103367563980095 1.0 12.498874877833119 -4.9235151356218205 20.16746328682159 1.1349388158809652 4.534049827107293 0.0264731851198573 0.14729760785019128 1445.452950862933 394477.3709996074 0.0217260287421902 7763.485691008283 1.1925727027121157e-05 4.9235151356218205 3.399111011226328 KEEITGT(ph)LR ddPTM_A549_PD325901_60min_R1 2 KEEITGTLR 9 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 KEEIT(0.004)GT(0.996)LR;KEEITGT(1)LR 112.44 3.8113e-05 26499000.0 6616.6 5613.7 6436.1 6214.5 7485.2 6023.1 6280.6 6300.2 7436.4 7738.4 7000.9 True False 7288.3123611165265 6086.786200281861 6872.892449413363 6598.355550846481 6959.465374538148 5974.049870552441 6519.61166987619 6174.537568588715 7123.873968777597 7249.796103356394 6139.8336823616 1.1870537115776043 0.9913601109046108 1.11939391276309 1.0746798516386713 1.133494119642226 0.9729986477833398 1.0618547679240251 1.005652251839787 1.1602714889888515 1.180780535502692 1.0 12.583983860635072 -5.233433195297272 23.475852265303725 1.067675960559686 1.187054108467797 0.19340061498477512 0.06853743213665144 5472.555747829657 4587140.658993948 0.00929441071352734 1.0935626175297153 5.842070649643699e-06 5.233433195297272 0.11937814790811108 KEEITGT(ph)LRK ddPTM_A549_MK2206_60min_R1 4 KEEITGTLRK 10 2 Q9Y490 Q9Y490 TLN1 Talin-1 1 KEEIT(0.012)GT(0.988)LRK;KEEIT(0.031)GT(0.969)LRK;KEEIT(0.019)GT(0.981)LRK;KEEIT(0.204)GT(0.796)LRK 116.51 2.7754000000000002e-05 205588000.0 14048.8 12843.7 12520.2 12431.900000000001 16900.3 14250.7 13216.3 14076.3 18495.8 17237.800000000003 16145.6 True False 16419.893979816978 13497.389470121801 14295.752624836454 15477.716058089192 14414.288257692027 15758.69961515094 15617.530635441826 16071.6586318608 14306.530831723378 13343.769007827972 12136.201924109006 1.3529680935184725 1.1121592698048923 1.1779428781946535 1.275334421335076 1.187709989321908 1.2984869330367443 1.2868548770943762 1.3242741619133633 1.1788309819815155 1.0995012353345976 1.0 13.567029374242354 -9.932571777276042 0.8215082777417403 1.0164258616556876 1.2440739555239215 0.5000862597442437 0.07380523640387059 0.26757014140630264 0.36926396828768465 0.029845652318056838 0.014623079533909093 1.1679606812093678e-10 9.932571777276042 0.22764809386823393 KEEITGT(ph)LRK ddPTM_A549_PD325901_60min_R1 2 KEEITGTLRK 10 2 Q9Y490 Q9Y490 TLN1 Talin-1 1 KEEIT(0.014)GT(0.986)LRK;KEEIT(0.005)GT(0.995)LRK 102.73 0.000135 267840000.0 9153.8 8898.9 10194.6 8767.7 9685.5 7938.6 8727.7 8796.9 10504.099999999999 10064.6 9957.3 True False 10083.087037328607 9648.841533692263 10886.466861109906 9309.260916108564 9005.223893161075 7873.950673634438 9059.83739948069 8621.438928465457 10062.649205991711 9429.119438364616 8732.615224525298 1.1546468930648115 1.1049200366224508 1.246644513837685 1.0660335623128996 1.0312172999298268 0.9016715464023509 1.0374712690920354 0.9872688429294806 1.1523064909273744 1.07975894917289 1.0 13.092198058383518 -6.431063499840273 8.211821733433322 1.0488506945310994 1.162102206660004 0.4341976710254881 0.06770101804255653 0.31970373855492185 25.993506427231274 0.011368505679144608 0.02646688136999455 3.706265271130881e-07 6.431063499840273 0.11325151212890461 KEEITGT(ph)LRKDK ddPTM_A549_MK2206_60min_R1 1 KEEITGTLRKDK 12 3 Q9Y490 Q9Y490 TLN1 Talin-1 1 KEEIT(0.153)GT(0.847)LRKDK 40.236999999999995 0.025889 7246100.0 2016.1 3019.5 2762.5 2143.2 3440.6 2720.8 2231.5 2202.6 4198.4 3733.0 3651.1 True False 2356.368391087422 3173.1796526727326 3154.2640394011846 2668.284096211905 2934.492297735259 3008.7132500791304 2636.9346649961376 2514.825295179599 3247.4691034671364 2889.7127073189044 2744.431104766274 0.8585999433525947 1.156224926602037 1.1493325643785157 0.9722539915751122 1.0692534028778875 1.0962976060334966 0.9608310663789495 0.9163375574675869 1.183294088828549 1.0529368736202993 1.0 11.422291407519971 -8.773424046541752 24.998228272059464 1.0865555208971418 1.0313862111865446 0.05504361846078487 0.09755643944361389 556.1530615535847 1160049.378143483 0.018532939623947756 0.019802660040629423 1.6849070732278634e-09 8.773424046541752 -0.05516930971059719 KEELEEVAHELAETEHENT(ph)VLR ddPTM_A549_PD325901_60min_R1 2 KEELEEVAHELAETEHENTVLR 22 1 Q5BJF6-2;Q5BJF6-3;Q5BJF6-4;Q5BJF6;Q5T4C6;Q5T4C3;Q5BJF6-9;Q5BJF6-8;Q5BJF6-5;Q5BJF6-6;Q5BJF6-10;Q5BJF6-7 Q5BJF6-2 ODF2 Outer dense fiber protein 2 1 KEELEEVAHELAETEHENT(1)VLR;KEELEEVAHELAETEHENT(1)VLR 118.75 1.7905000000000002e-15 5319400.0 436.6 560.49 510.48 541.34 346.07 499.04999999999995 444.71 665.5799999999999 471.84000000000003 689.3199999999999 263.29 True False 480.92331059206737 607.7244593398259 545.1242425656112 574.777342327658 321.7632370766871 494.9859022595001 461.6336824046494 652.304484762591 452.010205667799 645.7962175599125 230.90699913282378 2.0827576140965203 2.631901421880446 2.3607956649769695 2.489215764295784 1.3934754610517477 2.1436591533319924 1.999219097464887 2.8249662730551024 1.9575422458623304 2.796780608579273 1.0 7.851168093771019 -10.173657209200094 0.6327345254673783 0.9727131582436355 2.2408758926392034 0.0 0.6406711916382327 0.41115048412766547 0.3083319766840053 0.25984349950854757 0.08342408365385139 6.704135614034612e-11 10.173657209200094 1.268162734395568 KEEPEPETEAVSS(ph)SQEIPTMPQPIEK ddPTM_A549_MK2206_60min_R1 1 KEEPEPETEAVSSSQEIPTMPQPIEK 26 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-4;Q15326-5;Q15326-2;Q15326-6;Q15326-3;Q15326 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KEEPEPET(0.001)EAVS(0.076)S(0.438)S(0.438)QEIPT(0.046)MPQPIEK 66.083 0.00013142 2931400.0 530.65 654.67 777.45 629.7 504.05 599.18 706.17 485.42 687.3 945.61 785.5 True False 620.2107468531034 687.9899066783437 887.7041004280362 783.9765282683076 429.90491271099756 662.584829896506 834.4719481874627 554.2297715364028 531.6276473925692 731.9960442453329 590.4386713028698 1.0504236544746266 1.1652182353845761 1.5034653784942924 1.3277865532390936 0.7281110360917988 1.1221907745887265 1.4133084243044343 0.9386745795518984 0.9003943563172659 1.2397494944396183 1.0 9.205643404854941 -8.320082489484728 24.91726829791189 0.9505779631923752 1.1837804137095713 0.09563360471341253 0.21189591034522803 276.0686544665353 117300.01005956336 0.032577915244699156 0.039384784490554256 4.785391904070233e-09 8.320082489484728 0.23320245051719612 KEEPQELLQS(ph)QDFVGEK ddPTM_A549_MK2206_60min_R1 1 KEEPQELLQSQDFVGEK 17 1 Q5SQQ1;B4DK25;B4E107;F5GXE4;H0Y5C2;O95260-2;O95260 Q5SQQ1 ATE1 Arginyl-tRNA--protein transferase 1 1 KEEPQELLQS(1)QDFVGEK 128.01 2.4275e-12 2567800.0 1293.8 1638.4 2043.5 1471.4 2124.4 1472.4 1737.5 1484.1 2163.5 2353.3 2319.4 True False 1512.1618096269572 1721.7875618277892 2333.29902787921 1831.8930660536553 1811.903574175662 1628.2083906999828 2053.181259435711 1694.4757198656316 1673.470704399568 1821.6878955621694 1743.4289678165212 0.8673492511259554 0.9875868725435738 1.3383390266834012 1.0507414410739813 1.0392758223152039 0.9339115161882154 1.1776684323463578 0.9719212833705528 0.959873178254822 1.044887935895467 1.0 10.767711870533839 KEEPQELLQS(ph)QDFVGEK ddPTM_A549_PD325901_60min_R1 2 KEEPQELLQSQDFVGEK 17 1 Q5SQQ1;B4DK25;B4E107;F5GXE4;H0Y5C2;O95260-2;O95260 Q5SQQ1 ATE1 Arginyl-tRNA--protein transferase 1 1 KEEPQELLQS(1)QDFVGEK;KEEPQELLQS(1)QDFVGEK 139.26 2.5203000000000004e-13 9222100.0 4357.9 5487.9 4849.0 6247.2 6158.8 6246.7 5589.5 5784.2 6414.700000000001 5161.2 6539.9 True False 4800.310799883582 5950.384592786723 5178.082299405754 6633.075355579393 5726.227134706563 6195.828946286784 5802.211481191761 5668.829593382882 6145.112466720141 4835.320951184099 5735.533759841824 0.8369422970698314 1.037459605668998 0.9028073961765953 1.156487893423597 0.998377374186092 1.0802532433280725 1.0116253733552736 0.9883700158952982 1.0714107394408594 0.8430463760913245 1.0 12.485712037135867 -4.450894304889711 1.1837121758207587 1.0338612067723476 4.33789166561245e-15 0.20767578121139862 0.08396834476911157 5.799273451574034 1.613336523491699 0.008192728534861152 11.771161974088708 3.5408350460361256e-05 4.450894304889711 -1.0338612067723432 KEEPSQNDIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KEEPSQNDISPK 12 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KEEPSQNDIS(1)PK;KEEPSQNDIS(1)PK 145.04 3.3227e-12 359530000.0 22459.0 22654.0 22918.0 18506.5 25051.0 21283.0 19242.2 21760.8 28676.0 28142.0 28461.0 True False 26249.530130168376 23806.991836942572 26168.117015383294 23040.593330788357 21366.03108485905 23535.152933487992 22738.258664928846 24845.46003965506 22180.93178616223 21784.70265453216 21393.348216360253 1.2269949455641744 1.1128221536980603 1.2231894115280004 1.0769980041351543 0.9987231016283691 1.100115451563109 1.0628658232908157 1.161363793473658 1.0368144136129043 1.0182932766864714 1.0 14.384874672109357 -2.000000000000129 0.16144569302721803 0.9872119617771242 1.8150173636017035 0.49015911898646414 0.05591627189372276 33.05168228438825 0.3247899033523113 0.07969463873805667 6.5840504863171825 0.009999999999997034 2.000000000000129 0.8278054018245793 KEEPSQNDIS(ph)PK ddPTM_A549_PD325901_60min_R1 3 KEEPSQNDISPK 12 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KEEPSQNDIS(1)PK;KEEPSQNDIS(1)PK;KEEPSQNDIS(1)PK 192.32 2.7409e-20 596850600.0 25816.86 26349.14 26554.7 26261.2 27396.7 25222.620000000003 26815.96 29919.6 26465.1 26836.4 27254.4 True False 28437.76862183217 28569.67450011487 28356.861628383173 27883.294680487477 25472.450305484064 25017.21534525302 27836.456032056372 29322.830106527876 25352.86388186434 25141.945124071313 23902.28157987629 1.1897512179663374 1.19526976555109 1.1863663112502727 1.1665536859863146 1.0656911651032395 1.0466454953955278 1.1645940969707398 1.2267795443935876 1.060688026669777 1.0518638164332696 1.0 14.54486071603446 -14.999997319828976 0.03224096877762071 0.07855592341632466 1.726189908837506 0.410891131104129 0.057286428029435905 488.483844382871 1.2165636709909022 49.47835977681744 19.283396717848454 1.0000061713408888e-15 14.999997319828976 1.6476339854211812 KEEQRYS(ph)GELSGIR ddPTM_A549_MK2206_60min_R1 1 KEEQRYSGELSGIR 14 2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 1 KEEQRYS(1)GELSGIR 69.52199999999999 0.00057087 5402200.0 1112.0 946.25 794.85 800.12 1492.0 828.38 875.3 1074.4 1707.1 1427.8 1930.6 True False 1299.6784142102144 994.4100832394685 907.5716820698748 996.1494359187514 1272.5287764404482 916.0386217658595 1034.330679933282 1226.6994902120039 1320.4445756785312 1105.2589883498338 1451.1787381506306 0.8956018855861361 0.6852430076992004 0.625403100397182 0.6864415869186696 0.8768932061822706 0.6312376261336705 0.7127520909322472 0.8453124745855214 0.9099117434433295 0.7616284330063753 1.0 10.503009508244967 -8.69035998346204 1.373358209181239 0.9678084648342041 0.7238636483861796 0.24850460540166974 0.10477456517890207 0.18847462945725843 0.6951179671014883 0.0166968966832092 0.01833614416012646 2.0400462644985693e-09 8.69035998346204 -0.24394481644802457 KEES(ph)DEEETASK ddPTM_A549_MK2206_60min_R1 3 KEESDEEETASK 12 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KEES(0.996)DEEET(0.004)ASK;KEES(1)DEEETASK;KEES(1)DEEETASK 163.44 1.3762999999999999e-14 77317900.0 19050.8 20134.3 17130.0 18807.8 4402.71 1544.78 1757.3100000000002 2163.7000000000003 2726.57 24709.4 25284.399999999998 True False 22266.10929265823 21159.049869451435 19559.291581879555 23415.711844314235 3755.0771912346713 1708.2475942580259 2076.590480010918 2470.4111010533447 2109.006248437592 19127.529378576404 19005.585666060197 1.1715560721930613 1.1133069109907439 1.029133851781698 1.2320436873529004 0.19757755731465906 0.08988134458327064 0.10926211464870839 0.12998342405543212 0.11096770630982523 1.0064162038812607 1.0 14.21413586276048 -6.75435584764951 24.996947408231005 0.44051266658172883 1.127183133953679 0.554982248891612 0.3237225639096938 132.79228445732136 468603.94903916767 0.0581807742667729 0.11911272715363705 1.7605329282957763e-07 6.75435584764951 0.6866704673719503 KEES(ph)DEEETASK ddPTM_A549_PD325901_60min_R1 4 KEESDEEETASK 12 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KEES(1)DEEETASK;KEES(1)DEEETASK;KEES(0.86)DEEET(0.14)ASK;KEES(1)DEEETASK 240.2 1.0618999999999999e-50 298479000.0 31929.4 29664.899999999998 29516.699999999997 29409.7 36775.2 29546.4 31126.5 29394.700000000004 30800.9 32832.3 32919.3 True False 35170.84918281806 32164.865231975593 31519.880760336106 31226.27037472518 34192.236819552636 29305.783914477714 32311.035990574346 28808.399648803934 29506.44528601499 30759.262974804646 28870.434792636122 1.218230672154233 1.1141108702727183 1.0917702136019014 1.0816002806680955 1.1843339757485718 1.015079409955843 1.1191738615178668 0.9978512570289377 1.0220298204009415 1.065424306760018 1.0 14.817305214468565 -2.000000000000001 0.16497020135697169 0.9795228966086726 1.790264916417797 0.47778537612971883 0.050485963040739726 25.991661117436536 0.2589439131223926 0.05817702974403728 5.21154524301886 0.00999999999999998 2.000000000000001 0.8107420198091244 KEES(ph)DEEETASKAER ddPTM_A549_MK2206_60min_R1 2 KEESDEEETASKAER 15 2 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KEES(0.999)DEEET(0.001)ASKAER;KEES(0.999)DEEETASKAER 161.02 2.2081e-20 95202000.0 6821.5 8620.9 9572.099999999999 7123.400000000001 9779.0 6978.4 6578.1 5542.4 11471.5 13840.1 14981.5 True False 7972.802430337218 9059.666987158922 10929.567714588982 8868.63331978158 8340.52205416297 7716.849656112985 7773.255621694423 6328.052172888136 8873.223566221239 10713.611797633099 11261.180081634562 0.7079899595371681 0.8045042279302499 0.9705526095274514 0.7875403159785272 0.7406436975255565 0.6852611893400148 0.6902700751914567 0.5619350838024799 0.787947932800777 0.9513755858593832 1.0 13.459070397794841 -10.187641512135217 0.948427169510288 0.9822075076109632 0.7520629484284452 0.44643005883618403 0.09650241426268485 0.358795841874011 0.6392519310840848 0.045498279987782504 0.0200993332292405 6.491700691112419e-11 10.187641512135217 -0.23014455918251797 KEES(ph)EES(ph)DDDMGFGLFD ddPTM_A549_MK2206_60min_R1 1 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 2 KEES(1)EES(1)DDDMGFGLFD 69.975 0.00043321 10764000.0 9672.5 12618.0 10788.0 9586.3 15492.0 13928.0 12840.0 13783.0 18248.0 14251.0 14918.0 True False 11304.981530079407 13260.20230416445 12317.90061794026 11934.943930345364 13213.147322128307 15401.85171534185 15172.86179634794 15736.78245866722 14114.857136068098 11031.68920225065 11213.448884145406 1.0081627558906894 1.1825266642908525 1.0984934916282918 1.0643419391887605 1.1783303654962263 1.373516022989001 1.353095015914391 1.403384687552936 1.2587436106321372 0.9837909207262947 1.0 13.452942450984189 -5.259340751073015 23.177285331192063 1.173275174898887 1.0081626202331433 0.11198268000085387 0.1401898971809905 142.91600447907567 1578022.9386179799 0.021706932702364384 0.1945028532300863 5.50375697589535e-06 5.259340751073015 -0.1651125546657437 KEES(ph)EES(ph)DDDMGFGLFD ddPTM_A549_PD325901_60min_R1 6 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 2 KEES(1)EES(1)DDDMGFGLFD;KEES(1)EES(1)DDDMGFGLFD;KEES(1)EES(1)DDDMGFGLFD;KEES(1)EES(1)DDDMGFGLFD;KEES(1)EES(1)DDDMGFGLFD;KEES(1)EES(1)DDDMGFGLFD 140.26 2.2821999999999996e-13 5390320000.0 207424.0 233927.2 233093.30000000002 218777.6 233987.6 187252.4 236372.80000000002 253536.6 172126.30000000002 218412.4 221370.0 True False 228481.53178252222 253641.06611157965 248912.41304188012 232290.9954720202 217553.1181893981 185727.47853773547 245368.09625215954 248479.6136173851 164892.430196332 204621.80378950678 194142.8933800493 1.1768730124736138 1.3064658803403029 1.2821093201419194 1.1964949704200254 1.120582445238011 0.9566535004408324 1.2638530928445217 1.2798800372824752 0.8493353906781572 1.0539752458975886 1.0 17.566759372654058 -8.762029304524681 24.99999994114732 0.9288528166672642 1.1958298731928911 0.4769787091794917 0.10515963407833215 8.565802929893811 363001.24253245065 0.019003421399504953 0.02083197040191269 1.7296996417846231e-09 8.762029304524681 0.266977056525627 KEES(ph)EESDDDMGFGLFD ddPTM_A549_MK2206_60min_R1 1 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 KEES(0.5)EES(0.5)DDDMGFGLFD 46.027 0.0082561 1655300.0 485.6 281.47 298.65 327.45 266.59 233.91 245.02 243.68 485.42 481.68 452.04 True False 567.5574082198565 295.79562074442623 341.00306076639396 407.6752646997889 227.3749641496376 258.66220094310813 289.5369624097486 278.22238623870203 375.47314505645403 372.86815345871105 339.7859923306804 1.6703378627436427 0.8705350644842279 1.0035818675966168 1.199800091532433 0.669171093811177 0.7612503363333988 0.8521156520424498 0.8188165272214502 1.1050283223301414 1.097361756737267 1.0 8.40848256845457 -2.6496345390907616 11.735326816677226 1.00886777033529 1.1617391069682017 0.0 0.26071881661456436 0.0 0.0 0.03174212500749354 0.0 0.002240605826121259 2.6496345390907616 0.15287133663291175 KEES(ph)EESDDDMGFGLFD ddPTM_A549_PD325901_60min_R1 1 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 KEES(0.996)EES(0.004)DDDMGFGLFD 85.945 1.1400000000000001e-05 1960100.0 509.94 649.13 523.51 647.99 541.77 471.07 684.76 654.33 846.09 359.47 635.84 True False 561.7087334020133 703.8344632219331 559.0385367213664 688.0148706079344 503.71794420503574 467.2337621027608 710.8189165150499 641.2788748380452 810.5317796572316 336.77300285246605 557.6357109218529 1.0073040919015517 1.262176093525991 1.0025156670780542 1.2338070484591916 0.903310054107397 0.8378835016329127 1.274701211907614 1.1499960678234147 1.4535148373430113 0.6039301218634856 1.0 9.123179143951221 -7.823871386494903 24.999999513487552 1.2178945226178723 1.0519379736883347 0.0 0.24071974257127224 99.6949460996428 39920.69913388354 0.030654220593548356 0.04235490309928786 1.500129023246253e-08 7.823871386494903 -0.1659565489295376 KEES(ph)PPPPK ddPTM_A549_MK2206_60min_R1 2 KEESPPPPK 9 1 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 KEES(1)PPPPK;KEES(1)PPPPK 83.314 0.00060357 178830000.0 31202.1 33357.0 32774.0 29258.3 31012.9 22254.8 19877.0 20999.1 30875.4 44766.0 46988.0 True False 36468.25166189617 35054.72882073337 37421.84601894455 36426.584813455 26450.9434925402 24609.788164459347 23488.39360794455 23975.78673204664 23882.17119788234 34653.32950866273 35319.58279717283 1.032522152691319 0.9925012144690265 1.0595211793368067 1.0313424431607607 0.7489030559743043 0.6967745996826794 0.6650246618944968 0.6788241772200603 0.6761736494745345 0.98113643379266 1.0 15.108180681199343 -6.75400456277751 24.8244813789895 0.799621702448554 1.028548873315874 0.5348667352080418 0.1113875803489981 134.6153563334961 449469.3917873787 0.020711289282539572 0.04244430542480329 1.761957534865246e-07 6.75400456277751 0.22892717086732006 KEES(ph)PPPPK ddPTM_A549_PD325901_60min_R1 4 KEESPPPPK 9 1 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK 94.29700000000001 7.3067e-05 490462400.0 31376.9 29694.7 31016.4 31667.9 36530.5 33608.9 32971.3 33606.2 35418.1 33242.9 34901.4 True False 34562.25978954704 32197.17658255873 33121.35942076483 33623.95425998089 33964.72370338346 33335.200261395265 34226.04086408766 32935.8979774461 33929.600426760524 31143.937620731194 30608.74905820325 1.129162767280234 1.0518945586876174 1.0820879794134608 1.0985079526132924 1.109641025799478 1.089074244687609 1.1181783613242753 1.0760288803314935 1.108493534389223 1.01748482309781 1.0 14.901656464453406 -10.764452635443018 0.8248126035857712 0.994679916206005 1.0955095653514597 0.71909150506537 0.020901951030381657 0.26717956631223505 0.2945026867319852 0.017633857064878744 0.003640833592870703 1.720074923967651e-11 10.764452635443018 0.10082964914545467 KEESEES(ph)DDDMGFGLFD ddPTM_A549_MK2206_60min_R1 7 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 KEES(0.005)EES(0.995)DDDMGFGLFD;KEES(0.012)EES(0.988)DDDMGFGLFD;KEES(0.02)EES(0.98)DDDMGFGLFD;KEES(0.001)EES(0.999)DDDMGFGLFD;KEESEES(1)DDDMGFGLFD;KEES(0.032)EES(0.968)DDDMGFGLFD;KEES(0.038)EES(0.962)DDDMGFGLFD 254.53 2.9174999999999994e-86 470974200.0 58457.399999999994 69468.9 63646.6 59509.399999999994 92380.9 82103.7 74140.9 78491.0 114823.5 101546.0 97807.0 True False 68323.57997378797 73004.57028433736 72672.6449267515 74089.2056714785 78791.79198623824 90791.85903797486 87611.34183464578 89617.33961860606 88816.16058545123 78606.6880732403 73518.82256412445 0.9293345240151922 0.993005161646345 0.9884903265876586 1.0077583275610345 1.0717227131530107 1.2349471315156682 1.1916858673604243 1.2189713666923894 1.2080737624434092 1.0692049373434689 1.0 16.165826040973716 -6.808946798420574 2.9443384844166514 1.1275459089059192 0.9772099967990373 0.5612392725612727 0.06991396779804687 0.23259403146555857 4.115083894207081 0.014148343131951523 0.02955702639594015 1.5525771908217817e-07 6.808946798420574 -0.1503359121068819 KEESEES(ph)DDDMGFGLFD ddPTM_A549_PD325901_60min_R1 8 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 KEES(0.215)EES(0.785)DDDMGFGLFD;KEES(0.006)EES(0.994)DDDMGFGLFD;KEES(0.003)EES(0.997)DDDMGFGLFD;KEES(0.267)EES(0.733)DDDMGFGLFD;KEES(0.072)EES(0.928)DDDMGFGLFD;KEES(0.002)EES(0.998)DDDMGFGLFD;KEES(0.432)EES(0.568)DDDMGFGLFD;KEES(0.01)EES(0.99)DDDMGFGLFD 281.09 1.3494e-115 3169558500.0 288015.42000000004 287000.17000000004 285240.26 271540.35 306546.6 266943.43 293447.91000000003 299459.18 272398.23 296761.49 291934.2 True False 317254.533412654 311186.68155308405 304598.3793326244 288312.78070662095 285015.8243443591 264769.5312108924 304615.23079590744 293486.2317337172 260950.27968346173 278023.91887576727 256028.14412336773 1.2391392926700442 1.2154393518672622 1.1897066253226167 1.1260979986938342 1.1132206786103311 1.0341422897762078 1.189772444115081 1.1463045702987253 1.0192249784762812 1.085911550184111 1.0 17.96594288292556 -2.0000000000000058 0.12975784664296852 0.9419474021077135 1.9649141321399513 0.5058433794421863 0.05476235635672679 28.98671255204448 0.2446232087239623 0.1408766622071152 5.462485966424272 0.009999999999999867 2.0000000000000058 1.0229667300322376 KEESHSNDQS(ph)PQIR ddPTM_A549_MK2206_60min_R1 3 KEESHSNDQSPQIR 14 1 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 KEESHS(0.001)NDQS(0.999)PQIR;KEESHSNDQS(1)PQIR;KEESHSNDQS(1)PQIR 88.264 3.2238e-05 16956400.0 2158.3199999999997 2695.98 2170.01 2180.1 2671.93 2236.28 1855.4 2043.13 3369.9 4178.75 3869.03 True False 2522.5916501422575 2833.193866538379 2477.7500481958223 2714.2245978684073 2278.8926364842696 2472.9216652774758 2192.5021633133924 2332.749934323206 2606.6230306244993 3234.7674727320846 2908.2430712042546 0.8673936766563651 0.9741943149769806 0.8519748822679487 0.9332867065834674 0.7835977188593862 0.8503146417721819 0.7538923362432405 0.8021165622023656 0.8962878847486226 1.1122754850723746 1.0 11.505932139533666 -9.846336425436723 0.9850975237594997 0.9849700954192478 0.8558218844763223 0.4880395692161934 0.07203663104781007 0.3436771866231839 0.6836464284227317 0.021713717216618196 0.012644476187966245 1.4245036768810603e-10 9.846336425436723 -0.1291482109429255 KEESHSNDQS(ph)PQIR ddPTM_A549_PD325901_60min_R1 2 KEESHSNDQSPQIR 14 1 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 KEES(0.001)HS(0.03)NDQS(0.969)PQIR;KEESHS(0.001)NDQS(0.999)PQIR 116.6 1.4947999999999999e-06 33652000.0 3369.4 3648.3 3418.8999999999996 3645.9 4409.9 3507.8 3554.6 3600.6 3769.6000000000004 3846.7 3651.2 True False 3711.4590075788187 3955.7550447099634 3650.927113515845 3871.0989625603293 4100.163837329101 3479.233639807384 3689.872248151756 3528.7832083839444 3611.176821137114 3603.8187055180697 3202.1255468637833 1.1590610528103389 1.2353528888285776 1.1401573923582184 1.2089154238039637 1.2804506810624185 1.0865387970858935 1.1523196683420738 1.1020127589438506 1.1277436715977494 1.1254457867986194 1.0 11.644814157877594 -10.4550631045247 0.22587138465924878 0.9064923486546017 1.2192780818946238 0.3117483559253912 0.06013335178214718 2.3393171069951118 0.1902422810390647 0.21397151445908658 0.049426050069324684 3.5070091216692074e-11 10.4550631045247 0.3127857332400221 KEETPGT(ph)PK ddPTM_A549_MK2206_60min_R1 4 KEETPGTPK 9 1 Q99442 Q99442 SEC62 Translocation protein SEC62 1 KEET(0.005)PGT(0.995)PK;KEET(0.043)PGT(0.957)PK;KEET(0.001)PGT(0.999)PK;KEET(0.007)PGT(0.993)PK 95.40100000000001 0.0006349 1380680900.0 15207.300000000001 15656.0 14204.9 11811.1 17106.300000000003 15969.300000000001 14712.4 15583.5 19235.2 19064.5 19781.1 True False 17773.92045721133 16452.823527817294 16219.368417480504 14704.820030220431 14589.985930578592 17659.160726436578 17385.452639609757 17792.5088474672 14878.45791230255 14757.816209129716 14868.906939413375 1.1953750554519624 1.10652542213479 1.0908245295750307 0.988964426917086 0.9812413239270844 1.1876569540984219 1.1692488701725419 1.1966252072170929 1.0006423453269357 0.9925286552174735 1.0 13.860010973742087 -8.80282926824277 23.477054630110366 1.0003031869430878 1.1091282071579778 0.3449399877060719 0.07139667921244461 70.30809204450182 39879.50288747765 0.013203426652677465 0.014056237474194056 1.5746017571769483e-09 8.80282926824277 0.10882502021488993 KEETPGT(ph)PK ddPTM_A549_PD325901_60min_R1 4 KEETPGTPK 9 1 Q99442 Q99442 SEC62 Translocation protein SEC62 1 KEET(0.035)PGT(0.965)PK;KEET(0.2)PGT(0.8)PK;KEET(0.005)PGT(0.995)PK;KEET(0.179)PGT(0.821)PK 113.65 0.0006728 2327909000.0 19410.1 20357.5 20113.6 18142.8 24292.300000000003 19190.0 19931.6 19897.3 20833.5 22357.5 20407.800000000003 True False 21380.599063039586 22073.09796965247 21478.629848902365 19263.439550711646 22586.092651885476 19033.72300242422 20690.107944990006 19500.43274237012 19957.9404454478 20945.843634445173 17897.769975702984 1.1945957005853074 1.233287610669803 1.2000729631714206 1.0763038957849285 1.2619501023058792 1.0634689700595852 1.1560159714354215 1.0895453885507984 1.115107662716729 1.1703046615796318 1.0 14.127492221484959 -14.999999999898542 0.051300466455329714 0.3284734835566544 1.4808515286601251 0.11504405644596916 0.07174386072868823 154.31968888430413 0.6033851712410512 14.02192871016238 3.1725461071646643 1.0000000002336165e-15 14.999999999898542 1.1523780451034709 KEFS(ph)PFGTITSAK ddPTM_A549_PD325901_60min_R1 2 KEFSPFGTITSAK 13 1 P11940-2;E7EQV3;A0A087WTT1;P11940;E7ERJ7;H0YAR2;H0YAP2;H0YB86 P11940-2 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein 1 KEFS(0.998)PFGT(0.002)ITSAK;KEFS(0.99)PFGT(0.01)ITSAK 118.72 5.5436e-06 12129200.0 5868.7 5081.9 4710.5 5080.4 7079.0 6267.1 5432.7 6107.5 6170.3 5881.8 6363.5 True False 6464.4861036914 5510.169547929603 5030.1828565376 5394.204769574455 6581.79546122422 6216.062815450383 5639.444371387508 5985.681121258936 5910.983748796249 5510.422144205734 5580.829841550091 1.158337789760648 0.9873387478875612 0.9013324181803852 0.9665596197565126 1.1793578460718859 1.1138241071553354 1.0105028340769366 1.0725432043626681 1.0591585689977705 0.9873840093062574 1.0 12.446263944221062 -5.248152190382015 23.59595912568762 1.0313023539473625 1.1583379740141762 0.2107176256409946 0.07234069112428507 1274.0895722522419 2262495.0407795217 0.010096682429001838 0.24874285797834228 5.647390378946903e-06 5.248152190382015 0.12703562006681368 KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A549_MK2206_60min_R1 2 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 38 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0YA91 P20810-6 CAST Calpastatin 1 KEGITGPPADSSKPIGPDDAIDALSSDFT(0.034)CGS(0.927)PT(0.039)AAGK;KEGITGPPADSSKPIGPDDAIDALSSDFT(0.009)CGS(0.97)PT(0.021)AAGK 139.81 4.5429999999999995e-31 140110000.0 2697.5 3035.7 2589.5 2429.3 3516.1 3167.1000000000004 2943.5 2867.5 3963.2999999999997 4231.5 3658.0 True False 3152.7720524568854 3190.204163476939 2956.7300380196803 3024.478609055421 2998.8863477495047 3502.2404198491686 3478.295848718856 3273.9769063504496 3065.6188780895814 3275.601211095616 2749.6176443359614 1.146621989043239 1.1602355585870485 1.0753240706431884 1.0999633404614115 1.090655769512907 1.2737190667449936 1.2650107391782002 1.190702610268244 1.1149255186096738 1.1912933486745503 1.0 11.425015299309461 -9.850244642920002 0.9393311958753261 1.015612807916479 1.1593748192906939 0.0 0.08159175428503009 0.35205678371624716 0.6384257533628901 0.02459236967284792 0.013920149876024152 1.4117420705579444e-10 9.850244642920002 0.14376201137421485 KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_A549_PD325901_60min_R1 2 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 38 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0YA91 P20810-6 CAST Calpastatin 1 KEGITGPPADSSKPIGPDDAIDALSSDFT(0.003)CGS(0.964)PT(0.033)AAGK;KEGITGPPADSSKPIGPDDAIDALSSDFT(0.032)CGS(0.953)PT(0.015)AAGK 181.84 3.4772999999999997e-81 297420000.0 4444.6 5176.6 5269.9 5174.6 5564.6 4943.5 5872.9 5576.5 5493.9 5250.6 6122.700000000001 True False 4895.812520058413 5612.850249279282 5627.547104483063 5494.223289630733 5173.761692827845 4903.241775012201 6096.396423274192 5465.272332820378 5263.010488551886 4919.0762199269975 5369.646714993122 0.9117569143586914 1.0452922784672383 1.0480293030768357 1.0232001435568878 0.9635199422676491 0.913140479302181 1.13534404530783 1.0178085492217301 0.9801409232113005 0.9160893595088775 1.0 12.390611456803159 -8.756425804838841 24.776476950031746 0.9906221026216844 1.0100933719683902 0.03900628645163229 0.06437749315335818 435.785066199166 2153597.650227769 0.010029842535727682 0.011208631754660196 1.7521617491310294e-09 8.756425804838841 0.019471269346705844 KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGKK ddPTM_A549_MK2206_60min_R1 1 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGKK 39 3 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0YA91 P20810-6 CAST Calpastatin 1 KEGITGPPADSSKPIGPDDAIDALSSDFT(0.002)CGS(0.821)PT(0.177)AAGKK 93.589 5.085500000000001e-10 9028000.0 571.99 645.64 1021.9 966.42 1283.8 964.74 691.79 658.14 1425.2 1118.3 1212.3 True False 668.5279281871414 678.5003182485917 1166.8207861951382 1203.1929433842429 1094.9547206395762 1066.8281464574168 817.4792883251974 751.4333604692189 1102.3944755767343 865.6752533069194 911.2524522221123 0.7336363557178024 0.7445799641954888 1.2804583223340755 1.3203727907126355 1.201593167699578 1.170727325732764 0.8970941985744493 0.8246160091386635 1.2097574858520461 0.9499840040989171 1.0 9.831706981577998 -5.742331619171908 24.74171021130331 1.1045770519271245 0.7391076827359312 0.4437698250229176 0.15334913878562323 151.2530708648523 195846.6625798102 0.022000391933755185 0.08491914511293358 1.8099575150074481e-06 5.742331619171908 -0.3654693691911933 KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGKK ddPTM_A549_PD325901_60min_R1 1 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGKK 39 3 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0YA91 P20810-6 CAST Calpastatin 1 KEGITGPPADSSKPIGPDDAIDALSSDFT(0.007)CGS(0.824)PT(0.169)AAGKK 197.04 2.9214999999999992e-98 27318000.0 1537.1 1565.2 2186.5 2081.3 1723.6 2673.6 2501.9 3253.9 1856.0 2138.6 2841.7 True False 1693.1452604467868 1697.1048970698785 2334.889038492613 2209.8571740247457 1602.5402820971988 2651.8270880292553 2597.111173592211 3188.99841186483 1777.99877441386 2003.56843102424 2492.1889150204906 0.6793807845954831 0.6809696034042126 0.9368828440011803 0.8867133469320388 0.6430252026395932 1.0640554060916574 1.0421004434853838 1.2795973823030227 0.7134285702411294 0.8039392274593143 1.0 11.283197717563745 -7.259831936685191 24.977659415560918 0.9233473270096976 0.7769711811196366 0.2642885306293272 0.16495503499339131 245.0286341624124 3807433.7338089873 0.02801556267491326 0.046901835091354885 5.497535763839652e-08 7.259831936685191 -0.14637614589006098 KEGSYSS(ph)LSPPTLTPVMPVNAGGK ddPTM_A549_MK2206_60min_R1 1 KEGSYSSLSPPTLTPVMPVNAGGK 24 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 KEGS(0.109)YS(0.079)S(0.398)LS(0.398)PPT(0.016)LTPVMPVNAGGK 114.91 4.4026e-16 3008700.0 1125.3 997.5 854.56 872.74 946.09 1264.9 772.67 780.79 1593.3 1645.6 1405.7 True False 1315.2231290564348 1048.2684893330197 975.7494579224158 1086.5613391787879 806.9214142778443 1398.7508784273343 913.05413739752 891.4693735690905 1232.4200939772745 1273.8578170811647 1056.6258946536534 1.244738687279234 0.9920904784153779 0.9234578320099303 1.0283311668553674 0.7636774930093317 1.3237900807700955 0.8641224316169214 0.8436944221031998 1.1663731697406903 1.205590193773092 1.0 10.045248956120275 -8.795864702549574 24.99996143954647 1.0785650623843017 0.9949055863140691 0.08633429863490005 0.1652175651288296 440.7672856394121 320086.86235720955 0.027287193522919726 0.029050133713605587 1.6000564227828632e-09 8.795864702549574 -0.08365947607023261 KEGSYSSLS(ph)PPTLTPVMPVNAGGK ddPTM_A549_MK2206_60min_R1 2 KEGSYSSLSPPTLTPVMPVNAGGK 24 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 KEGS(0.006)YS(0.005)S(0.159)LS(0.829)PPT(0.001)LTPVMPVNAGGK;KEGS(0.052)YS(0.323)S(0.249)LS(0.375)PPT(0.001)LTPVMPVNAGGK 123.53 8.191500000000001e-17 4073100.0 1732.35 2023.6399999999999 2634.88 2202.21 2720.3 2258.0299999999997 2454.3 2021.31 3406.1000000000004 3410.6000000000004 3084.0 True False 2024.7283281088735 2126.6346323347093 3008.545604393626 2741.7515488609647 2320.147473559621 2496.973235840995 2900.214541026227 2307.836882502258 2634.6237884240213 2640.143091235427 2318.1576859300476 0.8734213122764987 0.9173813521151823 1.297817496477421 1.1827286666053396 1.000858348697179 1.077136922564095 1.251085963059781 0.9955478423705034 1.1365162104436426 1.1388971109513626 1.0 11.17876298947578 -5.55166307556185 24.99889517389916 1.0902480001408261 0.8844110531950411 0.4125703282192733 0.09881576476200095 138.0880293409413 119927.79968896361 0.01388520975711556 0.05377875141862122 2.8076109299405617e-06 5.55166307556185 -0.20583694694578503 KEGSYSSLS(ph)PPTLTPVMPVNAGGK ddPTM_A549_PD325901_60min_R1 4 KEGSYSSLSPPTLTPVMPVNAGGK 24 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 KEGS(0.017)YS(0.041)S(0.206)LS(0.734)PPT(0.002)LTPVMPVNAGGK;KEGS(0.003)YS(0.017)S(0.087)LS(0.889)PPT(0.004)LTPVMPVNAGGK;KEGS(0.007)YS(0.037)S(0.037)LS(0.464)PPT(0.454)LTPVMPVNAGGK;KEGSYSS(0.007)LS(0.976)PPT(0.017)LTPVMPVNAGGK 149.04 2.2405e-28 19302800.0 5380.7 4821.200000000001 6894.599999999999 6808.4 7473.1 7517.299999999999 7008.099999999999 7854.099999999999 7047.1 6265.05 6773.9 True False 5926.944702938015 5227.499444002873 7362.509016597834 7228.93940500171 6948.215236795417 7456.081601152872 7274.797080479465 7697.443814077746 6750.934893950378 5869.473673799876 5940.75324329004 0.9976756246579302 0.8799388276069584 1.239322475632806 1.216838860150714 1.1695848913844864 1.2550734386374935 1.2245580286803195 1.2957016558080159 1.1363769235114118 0.9880015939778896 1.0 12.536430150277935 -4.011876174594558 15.209859030514872 1.111351238346154 1.1225598834909323 0.0 0.1324821517591463 0.0 0.0 0.018553210889487606 0.0 9.730246115804228e-05 4.011876174594558 0.011208645144778373 KEGTGSTATSSS(ph)STAGAAGK ddPTM_A549_MK2206_60min_R1 1 KEGTGSTATSSSSTAGAAGK 20 1 A0A087WZK9;B3KS98;O15372;E5RGU4;E5RHC7;E5RH59;E5RFW7;E5RFH0 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 KEGTGSTAT(0.001)S(0.003)S(0.004)S(0.504)S(0.41)T(0.078)AGAAGK 59.356 0.0013392 4378200.0 436.81 440.96 473.08 397.82 560.82 434.06 277.48 401.72 734.04 772.41 584.33 True False 510.53284902083124 463.40298050755695 540.1698576506467 495.28591785881866 478.324120913762 479.9919410942912 327.89452424070294 458.6650402159032 567.781112021012 597.9220445379573 439.2247343124205 1.1623499523997418 1.055047551529597 1.2298256802323522 1.1276366724523348 1.0890190910185173 1.0928162819557266 0.7465301897307806 1.0442604989764872 1.2926892947179731 1.361312325622936 1.0 8.77881548971233 -4.69126872854313 6.494229670584824 1.1055896206971203 6.9055667548583735 0.011546461918380158 0.15466965768294044 41898.5511765571 9881.925180126957 0.02115003922434272 3557955.859894928 2.0357820063794342e-05 4.69126872854313 5.799977134161253 KEIPAS(ph)PSR ddPTM_A549_MK2206_60min_R1 3 KEIPASPSR 9 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KEIPAS(0.992)PS(0.008)R;KEIPAS(0.998)PS(0.002)R;KEIPAS(0.5)PS(0.5)R 120.84 5.6169e-05 54376500.0 8767.300000000001 10654.7 10111.8 9352.8 12275.099999999999 9711.8 9740.5 9568.8 14019.2 13736.8 14854.8 True False 10247.00590009462 11196.978720096758 11545.805289997063 11644.236419863146 10469.449050726642 10739.496229828905 11510.222766925788 10925.206703220985 10843.873584062128 10633.647339378058 11165.94318837667 0.917701776484173 1.0027794814281694 1.0340197057437848 1.0428350049267994 0.9376233493311114 0.9618082457206408 1.030833004676891 0.9784401119462722 0.9711560771104581 0.9523286264296318 1.0 13.44681750045649 -6.749753054877835 24.99408593324245 0.9841923985371106 1.0020576243024835 0.052136225556802196 0.03827423901395137 626.5879690029021 1340103.4333537691 0.005254432338792969 0.010859681771983416 1.779290848861119e-07 6.749753054877835 0.01786522576537286 KEIPAS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 KEIPASPSR 9 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KEIPAS(0.995)PS(0.005)R;KEIPAS(0.875)PS(0.125)R;KEIPAS(0.967)PS(0.033)R 120.84 5.6169e-05 76205000.0 16402.4 17796.8 16561.0 18556.1 19337.6 19812.7 17471.9 19092.6 18339.4 19145.6 19741.6 True False 18067.559573191316 19296.59879387504 17684.929049383107 19702.268153039222 17979.393687098403 19651.35194007974 18136.802715490536 18711.78311514504 17568.65879498142 17936.743548591458 17313.508352313238 1.0435527684819195 1.1145400690147726 1.0214526535876967 1.1379708694573636 1.0384604507206188 1.1350300320532174 1.04755213942917 1.080762069384105 1.0147370733577572 1.0359970482929273 1.0 14.079610476849512 -8.801539491285821 4.114028725196988 1.006287987869608 1.0787021440557807 0.3233128599312106 0.03818769502678003 0.12799293056431063 4.526852798861597 0.005724349057292663 0.006151331628480951 1.5792849935933525e-09 8.801539491285821 0.07241415618617264 KEIPASPS(ph)R ddPTM_A549_PD325901_60min_R1 1 KEIPASPSR 9 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KEIPAS(0.417)PS(0.583)R 52.247 0.019571 7957000.0 2629.8 2615.5 2873.1 3034.5 3052.1 3145.0 2996.2 3124.3 3181.3 3322.0 3742.6 True False 2896.7753600435617 2835.9173640980475 3068.0858433538206 3221.934173150478 2837.7310251733925 3119.3881627214273 3110.2220305835513 3061.9833855340657 3047.6010242687553 3112.2483530639347 3282.2839262961206 0.8825486841147273 0.8640073277567509 0.93474114739854 0.9816134878941615 0.8645598884480472 0.950371214912382 0.9475786069772666 0.9328819365694996 0.9285001214711512 0.9481959583478015 1.0 11.680484325872735 KEIQNGNLHES(ph)DSESVPR ddPTM_A549_MK2206_60min_R1 2 KEIQNGNLHESDSESVPR 18 1 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 KEIQNGNLHES(0.902)DS(0.041)ES(0.057)VPR;KEIQNGNLHES(0.748)DS(0.175)ES(0.077)VPR 72.033 0.00018809 21884000.0 3280.3999999999996 3639.7 2941.8999999999996 2890.4 3938.2 2982.0 2904.5 3381.8 4776.0 5101.1 4764.5 True False 3834.051321920133 3824.945183584353 3359.1056570187643 3598.5481297549863 3358.8959969019943 3297.5532607086034 3432.210053543036 3861.180506328144 3694.2436257048025 3948.75796713219 3581.3431564895272 1.0705623991860955 1.0680197390896233 0.9379457678977061 1.0048040560520661 0.9378872255833819 0.9207588093682991 0.9583583319358111 1.078137541590099 1.031524616402842 1.1025913448078533 1.0 11.806285045835649 -13.051855669958726 15.140137974920004 0.31607108031855946 1.0059231791125665 0.0 0.061828820866503646 0.0 0.0 0.0 0.007310302551923643 8.87450891544786e-14 13.051855669958726 0.689852098794007 KEIQNGNLHES(ph)DSESVPR ddPTM_A549_PD325901_60min_R1 2 KEIQNGNLHESDSESVPR 18 1 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 KEIQNGNLHES(0.996)DS(0.003)ESVPR;KEIQNGNLHES(1)DSESVPR 127.28 4.741399999999999e-13 39800000.0 4770.9 4885.9 5102.6 5453.700000000001 5732.799999999999 5164.1 4663.3 5489.9 5568.9 6016.7 6094.200000000001 True False 5255.238255849048 5297.651940067541 5448.893120426442 5790.5626627486445 5330.147905086345 5122.045281751896 4840.764433355673 5380.399637756764 5334.85849937141 5636.804535183551 5344.652034316738 0.9832704209939983 0.9912061451433282 1.0195038115559998 1.0834311804713985 0.9972862350743763 0.958349626666893 0.9057211586973815 1.0066884809732233 0.9981676010182804 1.0546625858879066 1.0 12.383880308434417 -6.9824200322776155 24.99916261292887 0.9889467957649275 1.0202288716733494 0.1150624833286008 0.041458112203824456 409.0051698804545 581612.5812843639 0.005605230482788533 0.01059149797849824 1.0413098289386972e-07 6.9824200322776155 0.031282075908421914 KEKPELSEPSHLNGPS(ph)SDPEAAFLSR ddPTM_A549_MK2206_60min_R1 3 KEKPELSEPSHLNGPSSDPEAAFLSR 26 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 KEKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;KEKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;KEKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR 95.244 2.0997e-09 19594000.0 2054.79 3012.73 2383.7000000000003 2373.5299999999997 3133.96 2478.25 2418.42 2385.08 4010.59 3674.86 3938.6400000000003 True False 2401.5883172077406 3166.065088589742 2721.7445034282714 2955.0449565518106 2672.958635531709 2740.4967700707894 2857.8156094644673 2723.1723940011593 3102.1977685961915 2844.7065736988875 2960.5669870659913 0.81119202088644 1.0694117385019568 0.9193321803961613 0.9981348064278548 0.9028536247310822 0.9256661923352398 0.965293344805093 0.9198144834749722 1.047839073444023 0.9608654646649543 1.0 11.531657781832376 -8.760908316350312 24.9999815181467 1.022590675216331 0.943859566477492 0.1441366172187013 0.06390284468812084 13.145427556300879 618826.4812964117 0.0095449833628168 0.01050422052123291 1.7341700587226624e-09 8.760908316350312 -0.07873110873883893 KEKPELSEPSHLNGPSS(ph)DPEAAFLSR ddPTM_A549_PD325901_60min_R1 2 KEKPELSEPSHLNGPSSDPEAAFLSR 26 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 KEKPELSEPSHLNGPS(0.029)S(0.971)DPEAAFLSR;KEKPELSEPSHLNGPS(0.232)S(0.768)DPEAAFLSR 131.81 2.0072e-24 56321000.0 1566.31 1630.0900000000001 1742.1999999999998 1860.69 2117.0 2211.81 1705.2800000000002 2270.79 2163.7 1509.3600000000001 2488.0 True False 1725.3206381435205 1767.4634051013538 1860.4361686996701 1975.6205953664073 1968.309223253521 2193.7977526832674 1770.1753635650216 2225.497312049708 2072.7672134694326 1414.0587520110114 2181.991772731458 0.7907090483589367 0.8100229465525484 0.852632073113063 0.905420735337278 0.9020699563818955 1.0054106436602328 0.8112658286282552 1.0199384525010327 0.9499427263535023 0.6480587001668051 1.0 11.091429946606878 -2.326517107024274 0.21321783357907173 0.9971975429833302 7.495437185974341e-11 0.0 0.11459465722462525 18.099947186657253 0.23444405587694023 0.03200547351153624 6.0561424807164155 0.004715012983557736 2.326517107024274 -0.9971975429083758 KEKQEEEVDYES(ph)EEEEEREGEENDDEDMQEER ddPTM_A549_PD325901_60min_R1 3 KEKQEEEVDYESEEEEEREGEENDDEDMQEER 32 3 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 KEKQEEEVDY(0.001)ES(0.999)EEEEEREGEENDDEDMQEER;KEKQEEEVDYES(1)EEEEEREGEENDDEDMQEER;KEKQEEEVDY(0.024)ES(0.976)EEEEEREGEENDDEDMQEER 164.18 9.352799999999999e-52 25019200.0 1228.69 1629.15 1539.42 1383.6200000000001 1513.2599999999998 2047.24 1513.52 1931.68 2088.82 2001.78 1526.5 True False 1353.4257042862284 1766.4441880024217 1643.8942984844728 1469.0830649709887 1406.9738380635918 2030.5679562002576 1571.1178318299235 1893.151127026355 2001.034159467218 1875.3872691740885 1338.7501772807743 1.010962110223778 1.319472608093592 1.2279320864954038 1.097354151582592 1.0509607109232217 1.5167639120875271 1.1735705873228168 1.4141183016473333 1.4947031891578555 1.400849315279505 1.0 10.386671050683054 KEKT(ph)PAT(ph)TPEAR ddPTM_A549_MK2206_60min_R1 1 KEKTPATTPEAR 12 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 KEKT(0.996)PAT(0.537)T(0.467)PEAR 51.265 0.0080966 7059200.0 1692.5 1580.3 1630.6 1427.2 2207.9 1454.0 1402.8 1624.7 2496.4 2355.4 2190.6 True False 1978.1526223478309 1660.7305199929535 1861.8435991484414 1776.8640640694434 1883.120834787445 1607.8613149129133 1657.670601862685 1855.0062004350737 1930.969385931629 1823.3135041036537 1646.61356251568 1.2013460033243188 1.008573327584953 1.1307107153325853 1.079102045870901 1.143632530215791 0.9764654874191844 1.0067150177787387 1.1265583149946934 1.172691291927362 1.1073111175630141 1.0 10.685286298829423 -11.137014087239832 1.525324091788712 1.0003211324935861 1.1003056947333436 0.0 0.0753265722117251 0.5108465733530994 2.140306665611548 0.05076723704657711 0.011048161669375724 7.294338491751357e-12 11.137014087239832 0.09998456223975749 KEKT(ph)PATT(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 KEKTPATTPEAR 12 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 KEKT(0.975)PAT(0.266)T(0.76)PEAR 58.246 0.0060358 9211800.0 3064.9 2770.6 2676.5 2734.6 3586.8 3652.5 2943.5 3142.3 2922.8 3670.9 3604.6 True False 3376.046391739873 3004.088185421545 2858.1433851019815 2903.510031272792 3334.875541788254 3622.755250982517 3055.5165032450022 3079.624361413337 2799.9648803107907 3439.1187475202846 3161.2570514420436 1.067944281911479 0.9502827946405673 0.9041160964111433 0.9184669212357541 1.0549207127168012 1.1459856607769228 0.9665511072094544 0.9741771426048795 0.8857124981448613 1.087895951375258 1.0 11.626282634603308 -11.535682525869788 2.7230375302897802 1.0008226051908606 0.9633653122280594 0.0 0.08115482021618048 1.189163242511701 16.017357402708974 0.07454402881839514 0.012199664360530464 2.912845662779112e-12 11.535682525869788 -0.0374572929628012 KEKT(ph)PATTPEAR ddPTM_A549_MK2206_60min_R1 2 KEKTPATTPEAR 12 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 KEKT(0.674)PAT(0.253)T(0.073)PEAR;KEKT(0.987)PAT(0.01)T(0.004)PEAR 51.888000000000005 0.0089817 40415000.0 1864.27 1863.38 2247.7 1500.34 2709.7 1857.21 1902.35 1958.52 2568.3 3154.3999999999996 3652.3 True False 2178.913198974531 1958.2180828605142 2566.457658411596 1867.9233673528222 2311.1067195178857 2053.738729483777 2247.9823705827484 2236.146207715948 1986.5841507323375 2441.8188491740552 2745.333111647961 0.7936789855226637 0.7132897915200682 0.9348438073043203 0.6803995330940188 0.8418310731445559 0.748083618986027 0.8188377436038485 0.8145263677578422 0.7236222600104933 0.8894435574371108 1.0 11.422765497413623 -10.86257585169156 1.0103427223578139 1.0052291471096073 0.7826768703692781 0.3827466433639576 0.07362667439235042 0.29263988809844166 0.5094508330760621 0.04834721783879001 0.010666098742685419 1.3722212748055426e-11 10.86257585169156 -0.22255227674032918 KEKT(ph)PATTPEAR ddPTM_A549_PD325901_60min_R1 2 KEKTPATTPEAR 12 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 KEKT(0.623)PAT(0.184)T(0.193)PEAR;KEKT(0.999)PAT(0.001)TPEAR 104.26 6.2739e-05 48384000.0 4026.5 3964.6 3737.5 4211.8 4850.2 4726.3 4394.5 5309.3 5449.5 5267.7 5777.4 True False 4435.267315847365 4298.710755764909 3991.149225413284 4471.953320308183 4509.53868428164 4687.810579799771 4561.735102262673 5203.401846434725 5220.476466146728 4935.096523008696 5066.816425956077 0.8753558335223202 0.8484046774901202 0.7877035380574655 0.8825962782861928 0.8900142229705347 0.9251984255409865 0.9003158430792964 1.0269568519946675 1.0303267431208851 0.9740034191346243 1.0 12.306863844692774 -7.741948008664065 0.979546013380701 1.0165516813077713 0.8460108175393017 0.7883676828944981 0.034038792699488084 0.14192372121395358 0.27457512131615613 0.006018493634207289 0.010453703933114346 1.8115569492281768e-08 7.741948008664065 -0.17054086376846955 KEKT(ph)PELPEPSVK ddPTM_A549_MK2206_60min_R1 4 KEKTPELPEPSVK 13 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KEKT(0.998)PELPEPS(0.002)VK;KEKT(1)PELPEPSVK;KEKT(1)PELPEPSVK;KEKT(1)PELPEPSVK 165.16 1.6202000000000002e-19 259384000.0 23669.5 25465.1 24970.4 23453.300000000003 35330.9 26903.9 25680.6 26570.2 39483.4 35630.2 39949.9 True False 27664.332936284805 26761.164819763682 28511.57819709078 29199.35955285866 30133.77141256023 29750.852840636555 30346.43260492933 30336.607217824825 30540.4729420337 27581.313073751408 30029.2372688511 0.9212466067188668 0.8911703144562603 0.9494606187239206 0.9723643425051871 1.0034810788823318 0.9907295538104357 1.0105628835404106 1.0102356895122526 1.017024597348428 0.9184819723130667 1.0 14.87408021100726 -6.232256605404144 1.3082680533154123 1.0076248045278764 0.902530254496893 0.5254780545083657 0.02906213810463883 0.08673802510811249 0.2656842991371599 0.001636283785083742 0.007436384758701727 5.857919436859667e-07 6.232256605404144 -0.10509455003098345 KEKT(ph)PELPEPSVK ddPTM_A549_PD325901_60min_R1 2 KEKTPELPEPSVK 13 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KEKT(1)PELPEPSVK;KEKT(1)PELPEPSVK 148.56 4.002e-13 260500000.0 5678.1 6377.0 6607.0 6431.1 7700.7 7705.1 8166.1 8477.2 7901.1 6927.9 7974.1 True False 6254.536532003709 6914.412170083447 7055.390751118548 6828.3344409121855 7159.829397972786 7642.352220217762 8476.865404161383 8308.11559576525 7569.044243815376 6490.4712116771925 6993.336251984689 0.8943566141594707 0.9887143876602753 1.008873375581826 0.9764058519242977 1.023807398927922 1.092804913827629 1.2121346806047932 1.188004594145953 1.0823223667626882 0.9280936848754006 1.0 12.771765158848758 -6.93167704245456 3.0002142929463846 1.0698427695278725 0.9709035186024852 0.3180850023879378 0.07841006726246601 0.2950146896522656 5.3945447199473096 0.01199661826928959 0.023809221097852454 1.1703693977518663e-07 6.93167704245456 -0.09893925092538725 KELAGGDFT(ph)SPDASASSCGK ddPTM_A549_PD325901_60min_R1 1 KELAGGDFTSPDASASSCGK 20 1 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 KELAGGDFT(0.642)S(0.358)PDASASSCGK 86.85600000000001 3.2775999999999998e-06 6244300.0 2682.2 2463.5 2487.4 2896.0 3219.4 3199.4 3056.2 2801.3 3023.9 2913.1 2794.6 True False 2954.4949694687193 2671.107790654001 2656.209921951305 3074.879342706799 2993.2804503270604 3173.345147157689 3172.5053634168084 2745.425873922663 2896.8159988955126 2729.1663688472445 2450.881916428991 1.20548238153126 1.0898557669175206 1.083777192261259 1.2546011793122172 1.2213074935443484 1.29477684170984 1.2944341961767152 1.1201787632114204 1.181948415987442 1.1135446185933437 1.0 11.259085261446938 -10.429686831716035 0.6826679498080426 0.9934051387396232 1.1966828902943 0.29250595948934677 0.07636219190357076 0.5389879187923851 0.43552366740694315 0.05983283614397965 0.015623605121331999 3.718032385146533e-11 10.429686831716035 0.20327775155467687 KELAGGDFTS(ph)PDASASSCGK ddPTM_A549_MK2206_60min_R1 1 KELAGGDFTSPDASASSCGK 20 1 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 KELAGGDFT(0.173)S(0.826)PDAS(0.001)ASSCGK 86.85600000000001 2.22e-06 3783600.0 1282.4 1649.4 1760.0 1210.8 1949.8 1113.8 1180.2 1541.0 2338.8 1711.4 2012.7 True False 1498.8377683301976 1733.347414842989 2009.5944649216592 1507.4460543548767 1662.9870028844425 1231.661576719397 1394.6270632437568 1759.441469114575 1809.0655342961445 1324.7935513810792 1512.8910423059021 0.990710980776061 1.1457186052216122 1.3283140746597963 0.9964009384689552 1.0992113485910848 0.8141112230013182 0.9218291497833901 1.1629664132539832 1.1957672322117938 0.8756701668098117 1.0 10.563092373746626 KELAGGDFTS(ph)PDASASSCGK ddPTM_A549_PD325901_60min_R1 1 KELAGGDFTSPDASASSCGK 20 1 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 KELAGGDFT(0.3)S(0.7)PDASASSCGK 99.387 1.4053e-07 5184800.0 2245.2 2288.5 2613.4 2163.5 3156.1 3264.7 2924.0 2902.2 3318.1 2971.0 2847.4 True False 2473.1310511711185 2481.3599264914487 2790.7610396508576 2297.1344813349992 2934.426423953918 3238.1133656078337 3035.274420074194 2844.3133442681446 3178.6517960035712 2783.4105529659687 2497.187851155769 0.9903664436083508 0.9936617004375564 1.1175615155901126 0.9198885379295036 1.1750923834567684 1.2967039560556661 1.2154770089360252 1.1390065600998804 1.2728925437196892 1.1146180098856913 1.0 11.28608863686019 -6.781028199486135 24.844825551666187 1.1546556487487603 1.0125469716668323 0.45022775873183496 0.08764762062764396 239.70076369796737 304015.97791492526 0.016951195507392 0.032067172817317705 1.6556624549742214e-07 6.781028199486135 -0.14210867708192798 KELASALK ddPTM_A549_MK2206_60min_R1 1 KELASALK 8 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 63.076 0.018294 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KELEEDFIK ddPTM_A549_PD325901_60min_R1 1 KELEEDFIK 9 1 H3BT58;Q14019 H3BT58 COTL1 Coactosin-like protein 0 94.29700000000001 0.00096188 1913500.0 1276.9 1001.7 1089.1 1286.0 1146.1 974.64 1356.9 1050.8 882.42 1450.6 1480.6 False True 1406.5299479959033 1086.1167744664554 1163.0128752903302 1365.4332992820935 1065.601889830355 966.7028549808625 1408.5375720241702 1029.8409696633466 845.3349560982105 1359.0088684390555 1298.4955862967015 1.0831996372104082 0.8364424076049818 0.8956617855030475 1.0515502044764724 0.8206434439022182 0.7444791227499594 1.0847457526146143 0.7931031730346072 0.651011035400666 1.0466026090353817 1.0 10.342625394836526 -6.792369540220279 24.995167253826594 0.8397969277092407 0.9523333942780596 0.04256309633080979 0.14120219986590626 355.06540066009023 286933.20979358023 0.022479471392270342 0.042485356376189796 1.6129854869319966e-07 6.792369540220279 0.11253646656881888 KELQAAGK ddPTM_A549_PD325901_60min_R1 1 KELQAAGK 8 1 P06744-2;P06744;A0A2U3TZU2 P06744-2 GPI Glucose-6-phosphate isomerase 0 94.69200000000001 0.0025545000000000003 8696500.0 5287.1 4945.1 4602.0 5051.3 6588.8 5044.7 4950.0 5187.0 5568.1 5911.4 6454.9 False True 5823.842499842698 5361.840931829958 4914.319394074094 5363.307328665352 6126.0254181260325 5003.617635764955 5138.374958743932 5083.541215877218 5334.092120589335 5538.153195154162 5660.988220982428 1.0287678180033393 0.9471563484192245 0.8681027414717435 0.9474153839052829 1.0821477061937606 0.8838770618209498 0.9076816199155067 0.8979953706731088 0.9422545874267226 0.9783014871196908 1.0 12.466838206458341 -10.492596834558483 0.9980994024480425 0.9974426172546252 0.9434206515833006 0.0704844397672908 0.05993783519944984 0.9171039336087752 1.7371222035466316 0.031249383473587848 0.010801027890897852 3.216645237950754e-11 10.492596834558483 -0.05402196567132467 KELQAEATVSGS(ph)PEAPGTNVVSEPR ddPTM_A549_MK2206_60min_R1 1 KELQAEATVSGSPEAPGTNVVSEPR 25 1 K7EJ02;Q9BZV1-2;Q9BZV1 K7EJ02 UBXN6 UBX domain-containing protein 6 1 KELQAEAT(0.004)VS(0.024)GS(0.973)PEAPGTNVVSEPR 107.52 2.0799e-12 7457300.0 1571.3 1639.7 1921.4 1438.5 2265.7 1327.9 1683.0 1960.8 2621.7 2284.3 3098.5 True False 1836.4970254033365 1723.1537262750403 2193.8834118752716 1790.932564576719 1932.4185313546407 1468.4174966113198 1988.7793148951384 2238.7494046981556 2027.8891359946133 1768.2750434847505 2329.0569357504037 0.7885152987089308 0.7398504089037453 0.9419621213203273 0.7689518178308057 0.8296999964631739 0.6304772863520434 0.8538989684485191 0.9612257091417339 0.8706910959826938 0.7592236223778817 1.0 11.185530192532354 -9.471192558395087 0.41631693191600966 1.0049441515898367 0.7883718739317432 0.0 0.10685593537584352 0.7655809171055753 0.30968489877759764 0.0650642470448365 0.03242148939192882 3.3791497753710946e-10 9.471192558395087 -0.2165722776580935 KELS(ph)PAGSISK ddPTM_A549_MK2206_60min_R1 4 KELSPAGSISK 11 1 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 KELS(0.997)PAGS(0.003)ISK;KELS(0.794)PAGS(0.201)IS(0.005)K;KELS(1)PAGSISK;KELS(0.998)PAGS(0.002)ISK 104.45 8.092e-05 116133000.0 11712.2 12559.099999999999 11448.900000000001 11667.0 15642.100000000002 12084.5 11085.1 12079.2 16806.2 16356.099999999999 17517.1 True False 13688.933024202239 13198.304545746687 13072.526175819086 14525.41552375153 13341.167810964573 13363.273768958115 13099.119182141467 13791.463590998545 12999.62253398661 12661.245650195211 13167.12062263464 1.0396299552895862 1.0023683175696319 0.992815859326682 1.1031580814093815 1.0132183180604224 1.0148971936952018 0.9948355116929455 1.0474168184721147 0.987279064766818 0.9615804406340885 1.0 13.68465227202188 -8.78110743807727 24.996067990553062 0.9939928887760584 1.0248771177290117 0.2563752343928426 0.031127184938035377 288.8747260155125 367128.2552474607 0.004999872162508138 0.005326452942666157 1.6553604009572805e-09 8.78110743807727 0.030884228952953285 KELS(ph)PAGSISK ddPTM_A549_PD325901_60min_R1 4 KELSPAGSISK 11 1 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 KELS(1)PAGSISK;KELS(1)PAGSISK;KELS(0.988)PAGS(0.011)IS(0.001)K;KELS(0.968)PAGS(0.032)ISK 114.7 1.7929e-05 247699300.0 19709.2 18540.5 19738.7 19411.4 23097.299999999996 21141.5 22462.7 22503.1 22804.1 21318.899999999998 23210.199999999997 True False 21710.063474853832 20102.97300289042 21078.28688044552 20610.39809151201 21475.025329359272 20969.330633441994 23317.530340561083 22054.25801715957 21845.722980393897 19972.821015693764 20355.492541580254 1.0665457212841494 0.9875945257441444 1.0355085654345535 1.0125226913282033 1.0549990517543186 1.0301558948086298 1.1455154078404275 1.0834548941573996 1.0732102372747574 0.981200576448602 1.0 14.313130510322296 -4.907697071336048 20.469804203097407 1.0421717281936416 2.9572497169998893 0.024947268124583366 0.04578069842332552 2192.250235105182 542720.2937941675 0.006260893043640055 22723.6054187386 1.2368098310286928e-05 4.907697071336048 1.9150779888062477 KEMQPTHPIR ddPTM_A549_MK2206_60min_R1 1 KEMQPTHPIR 10 1 P63104;E7EX29;B0AZS6;P63104-2;H0YB80;B7Z2E6;P27348;P31946-2;P31946 P63104;P27348;P31946-2 YWHAZ;YWHAQ;YWHAB 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed 0 51.927 0.004857500000000001 2175800.0 521.92 597.68 364.7 393.24 719.2 758.09 495.69 582.17 602.34 729.18 886.54 False True 610.0073362811112 628.099359102315 416.4199439528004 489.58381765321445 613.4066327184795 838.3105806205846 585.7504566847122 664.6943803208508 465.9109517393279 564.4577315624961 666.387650740734 0.9153941187281122 0.942543515631091 0.6248914479281272 0.7346832089535418 0.9204951983078279 1.2579923707901053 0.878993564832139 0.9974590309139116 0.6991590423703636 0.847041104280765 1.0 9.380217855213806 KENGVNS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KENGVNSPR 9 1 Q13625;Q13625-3;H7C5L8 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KENGVNS(1)PR;KENGVNS(1)PR 66.498 0.0022339 14433000.0 4264.700000000001 4373.4 3719.1 2810.64 3266.0 3076.2 2350.3 2756.2 3854.7000000000003 6476.8 6896.3 True False 4984.477098095599 4595.98737969827 4246.52430368758 3499.246926174423 2785.5757264440394 3401.7214421837016 2777.319087224032 3146.8997905084943 2981.616604691017 5013.686381667046 5183.758381802652 0.961556602559521 0.8866129632569825 0.819197962350022 0.6750405147080871 0.5373660424109804 0.6562268515687941 0.5357732522745822 0.6070691492017727 0.5751843325024265 0.967191372049161 1.0 12.339782759539954 -5.839748451384866 2.4092296262096493 0.7276694081502184 0.9403888613924706 0.24379098785142017 0.15160066110873413 0.4649392970435714 5.253758682924053 0.027308498266298765 0.12560202994948244 1.4462772294481832e-06 5.839748451384866 0.21271945324225217 KENNS(ph)PEHLKDEVSIIQSMGYR ddPTM_A549_MK2206_60min_R1 4 KENNSPEHLKDEVSIIQSMGYR 22 2 P38398;P38398-4;P38398-8;P38398-7;P38398-5;Q5YLB2;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;H0Y881;A0A0U1RRA9;E9PH68;E7EWN5;E7EQW4;A0A494C182;H0Y8D8;Q3B891 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 KENNS(1)PEHLKDEVSIIQSMGYR;KENNS(0.999)PEHLKDEVS(0.001)IIQSMGYR;KENNS(1)PEHLKDEVSIIQSMGYR;KENNS(1)PEHLKDEVSIIQSMGYR 141.37 2.5082e-27 18203400.0 3752.6200000000003 4406.12 4617.47 4647.67 5775.72 4721.64 4570.05 4734.62 6910.700000000001 6306.62 6697.81 True False 4385.9705132495865 4630.3726879398555 5272.29667837603 5786.349358641837 4926.119239050021 5221.280810829028 5400.368929314631 5405.766884165635 5345.4374841202225 4881.950161862183 5034.558926847966 0.8711727436261338 0.9197176466139481 1.047221167729366 1.1493259772538906 0.9784609358290226 1.037088032277331 1.072659791608734 1.0737319718988918 1.0617489161988796 0.9696877587087201 1.0 12.297649675223319 -5.67456106221643 4.0195536167389 1.0417148255779252 0.8826877086831665 0.5916941259006994 0.047927861514293096 0.10421849177117101 3.090008750207709 0.006286791565541507 0.027312539931227682 2.115626205275634e-06 5.67456106221643 -0.15902711689475868 KENNS(ph)PEHLKDEVSIIQSMGYR ddPTM_A549_PD325901_60min_R1 5 KENNSPEHLKDEVSIIQSMGYR 22 2 P38398;P38398-4;P38398-8;P38398-7;P38398-5;Q5YLB2;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;H0Y881;A0A0U1RRA9;E9PH68;E7EWN5;E7EQW4;A0A494C182;H0Y8D8;Q3B891 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 KENNS(1)PEHLKDEVSIIQSMGYR;KENNS(0.984)PEHLKDEVS(0.012)IIQS(0.003)MGY(0.001)R;KENNS(1)PEHLKDEVSIIQSMGYR;KENNS(1)PEHLKDEVSIIQSMGYR;KENNS(1)PEHLKDEVSIIQSMGYR 119.97 8.2355e-16 49266900.0 8445.88 8964.77 8373.3 9943.31 10341.52 10857.919999999998 9552.83 9879.42 10224.61 10472.640000000001 11099.699999999999 True False 9303.299520071761 9720.262629763049 8941.562490743283 10557.485675804535 9615.16731150721 10769.496699451895 9916.368173159148 9682.367217844945 9794.905198739056 9811.395723128084 9734.507266795552 0.9557031768629274 0.9985366863835942 0.9185428954625153 1.0845423796452611 0.9877405243000422 1.1063217073335285 1.0186820864558728 0.9946437916659165 1.0062045186559696 1.0078985462977463 1.0 13.248892240316318 -6.241502853544268 24.995816327640906 1.0141939483128006 0.961688504602421 0.332534461388592 0.04056269418115394 873.3854917259276 1095022.8656950446 0.005405655671335465 0.014283813696987871 5.734520986502322e-07 6.241502853544268 -0.052505443710379684 KENPLQFK ddPTM_A549_PD325901_60min_R1 2 KENPLQFK 8 1 E7EQR4;P15311;P35241-3;A0A2R8Y5P0;E9PQ82;E9PNV3;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3 E7EQR4;A0A2R8Y5S7 EZR;RDX Ezrin;Radixin 0 ; 85.73100000000001 0.0029533000000000003 10179100.0 5737.700000000001 5974.0 6026.3 6591.8 7229.0 7612.5 6396.3 7485.2 6911.1 6970.0 7132.6 False True 6320.187080128504 6477.449945754827 6435.280957085771 6998.9605149360095 6721.259978696132 7550.506323916335 6639.714696689661 7335.901813974195 6620.650500997644 6529.913010492354 6255.335417276683 1.0103674157380444 1.035508012546327 1.0287667291688458 1.118878532972908 1.074484345017312 1.2070505928527036 1.0614482283957718 1.1727431583785393 1.058400558779309 1.0438949432603266 1.0 12.610871529863372 -9.690054947409802 1.2173553640831898 1.0118403002465224 1.0877575500775936 0.14368479493382647 0.05841017943855206 0.43455695399073774 1.3142697115404862 0.016085768851599788 0.01119248195243931 2.041479638106953e-10 9.690054947409802 0.07591724983107118 KENPS(ph)PLFSIK ddPTM_A549_MK2206_60min_R1 2 KENPSPLFSIK 11 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 KENPS(0.997)PLFS(0.003)IK;KENPS(1)PLFSIK 115.8 8.5105e-06 32787000.0 7350.9 8010.0 7538.7 7456.4 10113.6 8358.7 8060.299999999999 8288.0 10848.7 10662.400000000001 11254.900000000001 True False 8591.552207749883 8417.674786523794 8607.801018582337 9283.218334730514 8625.902837404907 9243.212085944 9524.752175786854 9462.849380935497 8391.486771814001 8253.756434641591 8459.997710562284 1.0155501811807057 0.9949972889489498 1.0174708449194403 1.097307428717202 1.0196105403947675 1.0925785564225243 1.1258575358590497 1.1185404186482408 0.9919017780982675 0.9756215919936715 1.0 13.046441557586403 -8.805910363047971 24.998857164568552 0.9961757969477791 1.0597854005746967 0.3485607121506801 0.04297477411342679 122.03733611845665 68601.38595399544 0.007943323384517588 0.008456333469048692 1.5634703044679181e-09 8.805910363047971 0.06360960362691759 KENPS(ph)PLFSIK ddPTM_A549_PD325901_60min_R1 1 KENPSPLFSIK 11 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 KENPS(1)PLFSIK 63.681999999999995 0.0027623 26525000.0 6749.5 6724.1 7021.2 7180.2 8987.9 8240.5 7959.7 8451.9 8336.8 8047.4 9155.7 True False 7434.704271280718 7290.763505230999 7497.700853905481 7623.704646582651 8356.620910571724 8173.392100129067 8262.610739214966 8283.32022411272 7986.433288002944 7539.285790622125 8029.606942764224 0.9259113583362141 0.9079851052735496 0.9337568958667319 0.9494492944580124 1.040726024341974 1.0179068736975243 1.029018082467998 1.0315972230218724 0.9946231920106394 0.9389358463450137 1.0 12.971113652777811 -6.581760953177121 4.900837913780013 1.0064702072800937 0.9238103019415578 0.6790373208212079 0.026276936452382674 0.06594036753300263 3.237360073412935 0.0028102837049521715 0.006027495144800713 2.619624519991562e-07 6.581760953177121 -0.08265990533853596 KENQGS(ph)HESPTLNPETVAINLSDVDLSK ddPTM_A549_PD325901_60min_R1 2 KENQGSHESPTLNPETVAINLSDVDLSK 28 1 P25445-6;P25445 P25445-6 FAS Tumor necrosis factor receptor superfamily member 6 1 KENQGS(0.388)HES(0.388)PT(0.224)LNPETVAINLSDVDLSK;KENQGS(0.363)HES(0.363)PT(0.237)LNPET(0.038)VAINLSDVDLSK 78.58800000000001 1.2487e-06 4875900.0 1259.5 1264.5 1483.28 1562.41 1797.99 1578.79 1464.0900000000001 1457.02 1723.62 1482.71 1482.04 True False 1387.3635128051062 1371.0638527631363 1583.9443004872282 1658.916517209437 1671.7053851287674 1565.9328576861565 1519.806746130789 1427.9585930899216 1651.182245450009 1389.0914375591285 1299.7584754256138 1.0674010126002875 1.0548604826863492 1.2186451024822562 1.2763267549890103 1.286166173743439 1.204787571916684 1.1692993543535994 1.0986338001160776 1.270376209633347 1.0687304324784357 1.0 10.34402784739403 -10.959644224199124 1.174322992836072 0.9980371006360527 1.19188567198748 0.3261293463352558 0.07993713913636293 0.39639566418403915 0.9554067313556681 0.0631991590118043 0.014058891190069561 1.0973768035494436e-11 10.959644224199124 0.1938485713514273 KEPAITSQNS(ph)PEAR ddPTM_A549_MK2206_60min_R1 1 KEPAITSQNSPEAR 14 1 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KEPAITSQNS(1)PEAR 204.78 3.4978e-32 54139000.0 6437.7 7823.4 6897.5 7585.3 10792.0 7605.9 7216.3 8712.0 10224.0 10766.0 10350.0 True False 7524.226373346317 8221.577643556837 7875.669216930193 9443.698840517058 9204.51109607596 8410.751289612192 8527.40830069981 9946.952679381031 7908.280324373096 8333.953122688268 7779.809354531768 0.9671479120453546 1.0567839478955532 1.0123216210102355 1.2138727840440033 1.1831281046384894 1.081099922418137 1.0960947642929788 1.2785599525760736 1.0165133827818664 1.0712284508403422 1.0 12.925519086834795 -8.959296570260035 24.9999972101176 1.0072850501792758 1.1126688197632117 0.13833553345309324 0.08660713806759165 154.15625297617885 94682.9615567799 0.014704437785660994 0.015635751245138878 1.098255608424776e-09 8.959296570260035 0.10538376958393592 KEPAITSQNS(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 KEPAITSQNSPEAR 14 1 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KEPAIT(0.002)S(0.002)QNS(0.996)PEAR 92.935 4.7795e-05 3605000.0 632.05 761.21 939.4 570.4 732.87 587.24 815.92 746.22 529.37 989.09 912.27 True False 696.2152507093825 825.3598381667275 1003.1533330711004 605.6323125276095 681.3957394642462 582.4577121388013 846.9702820885551 731.3360567017352 507.1224198337635 926.638688600845 800.066573355999 0.8701966484976412 1.0316139502049586 1.253837326140528 0.756977397502303 0.8516738008513838 0.728011557457769 1.0586247573571428 0.9140940029953215 0.6338502778669562 1.1582019790102218 1.0 9.643976241092851 -6.284597091275046 24.944606688754167 0.8373188147453177 1.049855830250249 0.10789964307365063 0.1701680821647088 790.5003429102744 851495.3794582065 0.023464010553338296 0.05455860672011856 5.192815694625793e-07 6.284597091275046 0.21253701550493131 KEPAITSQNS(ph)PEAREESTSSGNVSNR ddPTM_A549_MK2206_60min_R1 2 KEPAITSQNSPEAREESTSSGNVSNR 26 2 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KEPAITS(0.003)QNS(0.989)PEAREES(0.002)T(0.002)S(0.002)S(0.002)GNVSNR;KEPAITS(0.002)QNS(0.996)PEAREESTSSGNVSNR 99.774 1.552e-10 20199500.0 2108.5 1975.01 2029.81 1844.51 2532.6 1463.23 1631.6599999999999 1587.77 2567.0 3791.8 3293.8999999999996 True False 2464.363252124314 2075.5295730502335 2317.667580024222 2296.4150328032006 2160.0578949149326 1618.068027386536 1928.1115014508628 1812.8412598416921 1985.5785986566623 2935.229746480531 2475.9337229847547 0.9953268252889692 0.8382815556743453 0.9360781989068181 0.9274945494239065 0.8724215332836003 0.6535183120475229 0.7787411607797448 0.7321848896893329 0.8019514336042218 1.1855041672691027 1.0 11.27375698095862 -3.2775587304410805 1.7484314453781238 0.8674200240815191 131.04761618710955 0.05798438743172529 0.13649767793041487 3064.9973758806427 11.106827863489375 0.017076569538979892 1599271.1691106397 0.0005277658312121002 3.2775587304410805 130.18019616302803 KEPAITSQNS(ph)PEAREESTSSGNVSNR ddPTM_A549_PD325901_60min_R1 2 KEPAITSQNSPEAREESTSSGNVSNR 26 2 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KEPAITSQNS(1)PEAREESTSSGNVSNR;KEPAITSQNS(1)PEAREESTSSGNVSNR 128.86 2.1539e-24 26064000.0 2037.87 1927.86 2559.3 2488.2 2750.2 2684.1 2726.4 2624.1 2929.7 2916.4 3050.6 True False 2244.753062199398 2090.3275280252574 2732.989488321127 2641.8904628877967 2557.0354396749353 2662.24157951052 2830.154643943325 2571.760266933374 2806.5748973061854 2732.2580062840625 2675.395539346698 0.8390359590520741 0.7813153222703257 1.0215272650818923 0.987476589548668 0.9557597753561834 0.9950833588369552 1.0578453175691611 0.9612635698575507 1.0490317622311354 1.0212538542810194 1.0 11.385536484762424 -5.764926107168579 24.99938605599497 1.0129478079398901 0.810175603756575 0.8353359569988754 0.0333079097591988 21.884562873033012 156915.32893091944 0.004821043760055146 0.015914540314293412 1.718200704743742e-06 5.764926107168579 -0.2027722041833151 KEPEPKGS(ph)TK ddPTM_A549_PD325901_60min_R1 1 KEPEPKGSTK 10 2 P39748-2;P39748 P39748-2 FEN1 Flap endonuclease 1 1 KEPEPKGS(0.839)T(0.161)K 56.482 0.0031021 9035200.0 3501.9 2924.3 2843.5 2744.9 3239.3 2552.8 2723.1 2536.6 3164.6 3726.7 3905.6 True False 3857.4103100374755 3170.741023831741 3036.4770093545612 2914.446238879796 3011.7827429783365 2532.010843178143 2826.7290606374945 2486.0055230757944 3031.6028671929416 3491.3955259974005 3425.2359596382544 1.1261735995685576 0.9257000280256923 0.8865015564286115 0.850874588852441 0.8792920483342165 0.7392223114011549 0.8252654981865923 0.7257910264781717 0.8850785472639715 1.0193153310133218 1.0 11.741987661370066 -5.260379397414405 3.293766843811531 0.8946746055977677 1.158288679508487 0.38658505257548703 0.08865976895181808 0.3174658590226864 5.5088839636573015 0.013900639685525051 0.21202546903102218 5.490610074258835e-06 5.260379397414405 0.26361407391071934 KEPIQPET(ph)PQPKPSVQK ddPTM_A549_MK2206_60min_R1 2 KEPIQPETPQPKPSVQK 17 2 A0A5F9ZHU7;P49643 A0A5F9ZHU7 PRIM2 DNA primase large subunit 1 KEPIQPET(0.999)PQPKPS(0.001)VQK;KEPIQPET(0.999)PQPKPS(0.001)VQK 97.45700000000001 5.905600000000001e-07 23349000.0 2644.8 3308.3999999999996 3212.6000000000004 2981.9 3968.3 3614.9 2990.5 2813.5 4487.8 4516.1 4590.2 True False 3091.1775808481825 3476.783428681062 3668.194987504162 3712.46563386258 3384.568326775223 3997.4263186235817 3533.8351403410034 3212.3222409823834 3471.3204655439713 3495.9098734323316 3450.326656924807 0.8959086742248557 1.0076679034731846 1.063144262048955 1.0759751185910644 0.9809414189761984 1.158564598688285 1.0242030658890209 0.9310197440393799 1.0060845858107463 1.0132112756385077 1.0 11.752517239021417 -5.267756621847116 5.074165016291077 1.016897064239894 0.8906997536092134 0.29574532378758656 0.05628490509317064 0.15882815454822188 13.032130782959072 0.007619912016278267 0.06942270560830109 5.398130484098426e-06 5.267756621847116 -0.12619731063068063 KEPIQPET(ph)PQPKPSVQK ddPTM_A549_PD325901_60min_R1 2 KEPIQPETPQPKPSVQK 17 2 A0A5F9ZHU7;P49643 A0A5F9ZHU7 PRIM2 DNA primase large subunit 1 KEPIQPET(0.999)PQPKPS(0.001)VQK;KEPIQPET(1)PQPKPSVQK 130.05 1.6789e-12 33724000.0 7539.8 7641.7 8577.0 7381.1 10315.0 8596.2 8287.0 9301.4 9244.4 8307.4 9929.7 True False 8305.234945492606 8285.692877548483 9159.086797690903 7837.013783305647 9590.509984818182 8526.195397261028 8602.366319820396 9115.876280192857 8855.89001626696 7782.869346250251 8708.409849554482 0.9537028101539683 0.9514587646529262 1.0517519220985536 0.8999362591675201 1.1012929054216285 0.9790760362177056 0.9878228595614948 1.0467899923955946 1.0169353727328327 0.8937187707866573 1.0 13.088193592280703 -5.1701349246097354 0.8285346044915973 1.010173035901119 0.9019803103597529 0.013721415426521388 0.060299994571976 3.716327269596271 1.6655694143606607 0.006730231685825232 0.3801688403552306 6.7587296567062774e-06 5.1701349246097354 -0.10819272554136605 KEPVVGGTLS(ph)PLALANK ddPTM_A549_MK2206_60min_R1 1 KEPVVGGTLSPLALANK 17 1 J3KTM2;J3KRL7;O15534-4;O15534 J3KTM2 PER1 Period circadian protein homolog 1 1 KEPVVGGT(0.195)LS(0.805)PLALANK 88.755 2.9361e-06 2301700.0 1307.6 1558.5 1947.2 1567.6 2350.2 1475.7 1420.6 1247.2 2530.6 1941.1 2184.2 True False 1528.2909122493497 1637.8209931082813 2223.3422398269618 1951.6620703722383 2004.4886932911133 1631.85759450962 1678.7046314557542 1423.9944193898093 1957.4231405378084 1502.604161847501 1641.8028591466948 0.9308614025947418 0.9975746990473126 1.3542078011622627 1.1887310705419216 1.220907054780572 0.9939424733111722 1.0224763723022376 0.8673358140756994 1.1922400607556214 0.9152159490259747 1.0 10.681065189362233 -7.264347756747749 24.960921363338873 1.062529110904515 1.1454088679610925 0.12188975009557135 0.1368157710360528 563.71278666261 4838025.662246301 0.02128141714910893 0.034880072793462384 5.440668225751521e-08 7.264347756747749 0.08287975705657757 KEPVVGGTLS(ph)PLALANK ddPTM_A549_PD325901_60min_R1 2 KEPVVGGTLSPLALANK 17 1 J3KTM2;J3KRL7;O15534-4;O15534 J3KTM2 PER1 Period circadian protein homolog 1 1 KEPVVGGT(0.004)LS(0.996)PLALANK;KEPVVGGT(0.002)LS(0.998)PLALANK 121.63 3.0601e-10 2775000.0 2277.2 2271.4 2564.0 2597.7 2437.7 2508.8 2386.8 2997.2 2694.5 3047.9 3019.6 True False 2508.379667613962 2462.8188494789924 2738.0084585845248 2758.1540291952533 2266.4843616084595 2488.369164589989 2477.6309801070756 2937.4184947420854 2581.259535376155 2855.4550738421326 2648.2083428215064 0.9471987634256278 0.9299943700256632 1.0339097624272802 1.0415170077806666 0.8558557591407846 0.939642521456141 0.9355876348713973 1.109209742769877 0.974719206807565 1.0782592244233387 1.0 11.370800912597055 KEQES(ph)DEEEEEEEEDEPSGATTR ddPTM_A549_MK2206_60min_R1 1 KEQESDEEEEEEEEDEPSGATTR 23 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 KEQES(1)DEEEEEEEEDEPSGATTR 148.3 1.0364000000000001e-27 4276100.0 306.86 617.6 665.74 587.74 1157.6 637.96 684.48 695.41 1223.1 925.31 1152.8 True False 358.6504659932974 649.0332020171155 760.1519426573549 731.7363263846515 987.3185734634468 705.4685037564253 808.8411559473702 793.9864971038062 946.0698028893512 716.2818283442948 866.5279443385722 0.4138937103373605 0.7490043526669273 0.8772388099238796 0.8444463114726113 1.1393961151674976 0.8141324331956947 0.9334276652379229 0.9162849303260064 1.091793760455693 0.8266113436088187 1.0 9.75910246484813 -5.090516154785763 0.7626009281441762 1.0164355555617703 2.129935603611209e-27 0.6404088888063899 0.11043779912447184 1.1426986796900098 0.39517528785845724 0.015386699951301078 1.0486075112989441 8.118650488055438e-06 5.090516154785763 -1.0164355555617703 KEQSEVSVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KEQSEVSVSPR 11 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KEQSEVSVS(1)PR;KEQSEVS(0.004)VS(0.996)PR 133.47 2.7433e-08 131411000.0 9967.8 11299.2 10781.7 9495.3 13148.400000000001 9317.9 8854.7 7733.3 13276.400000000001 13684.4 15385.8 True False 11650.120950687568 11874.281017214698 12310.707183207875 11821.648926260217 11214.287777580155 10303.913993278567 10463.484372906705 8829.518957237991 10269.31659805428 10593.084535771439 11565.081233522207 1.007353144820018 1.0267356344023122 1.0644721757357327 1.0221846857412753 0.9696678779112029 0.8909504209457642 0.904748022225521 0.7634636349673883 0.8879588816279075 0.915954183276001 1.0 13.497487779097963 -6.901205022083264 3.0483406519276075 0.9235947192447655 1.0332320674930302 0.5228417894866046 0.05730999843835037 0.23419916811951932 4.37824162245677 0.010617780103995184 0.0212796741786312 1.2554371560115808e-07 6.901205022083264 0.10963734824826465 KEQSEVSVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KEQSEVSVSPR 11 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KEQSEVSVS(1)PR;KEQSEVSVS(1)PR 182.57 6.2658e-19 212510000.0 10120.099999999999 10026.0 9972.3 8844.3 11677.8 10075.2 9334.3 9915.3 10591.4 11068.9 11539.0 True False 11147.485101976134 10870.926206250057 10649.080246311405 9390.592324137342 10857.591614222942 9993.150911621919 9689.521894424946 9717.531563097622 10146.280290585637 10370.00776496971 10119.776151747697 1.1015545141332943 1.0742259555190492 1.0523039330738848 0.9279446682736728 1.0729082789393343 0.9874873477212329 0.9574838167494005 0.9602516317931986 1.0026190439828417 1.0247269909402885 1.0 13.30488975769084 -6.033269107975777 7.752659154153436 0.9951994686200536 1.0820910390403338 0.5249472582516314 0.03650504865495626 0.13111731606729296 27.25738551563716 0.00463086028972983 0.012654427757377748 9.262556967232658e-07 6.033269107975777 0.08689157042028017 KEQT(ph)PEHGK ddPTM_A549_MK2206_60min_R1 3 KEQTPEHGK 9 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KEQT(1)PEHGK;KEQT(1)PEHGK;KEQT(1)PEHGK 73.848 0.00083814 186988000.0 7493.9 5799.119999999999 3959.5 3369.3900000000003 3699.73 5159.24 4684.67 5339.670000000001 3900.21 8674.6 8977.2 True False 8758.68711173555 6094.270437955786 4521.016638555289 4194.890701257664 3155.5046180026948 5705.187352373659 5535.813899649318 6096.584574553548 3016.818662355555 6715.001835228648 6747.913481884314 1.2979845007274367 0.9031340508909427 0.6699873450797154 0.6216574519693258 0.46762671549866097 0.8454742888583273 0.8203741666977442 0.9034769919502752 0.4470742949586731 0.9951226928525355 1.0 12.720225760946631 -5.33455426876248 2.6486983163627524 0.7285842739049573 1.365181657379303 0.4269150504667327 0.18130388302907258 0.3165344257780699 3.1798753364262033 0.02967972822623169 0.40863641474915974 4.628558224206627e-06 5.33455426876248 0.6365973834743457 KEQT(ph)PEHGK ddPTM_A549_PD325901_60min_R1 1 KEQTPEHGK 9 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KEQT(1)PEHGK 48.004 0.020521 32612000.0 1530.9 1497.8 1395.6 786.07 1131.4 900.1 636.31 1127.8 968.4 1185.6 1844.1 True False 1686.3158410109847 1624.024862529558 1490.3138084245563 834.6237586055015 1051.9343671181077 892.7698840272035 660.5251252521924 1105.3051442580163 927.7015157017138 1110.7410136642386 1617.287390713054 1.0426816227556788 1.004165908826837 0.9214897840559335 0.5160639744044007 0.6504313167583129 0.552016845709522 0.4084154300869001 0.6834314980782066 0.5736157475961615 0.6867926010197349 1.0 10.659360352042471 -6.049815283116639 6.961329388958482 0.7150053288569211 1.0096122362010782 0.4610237013891818 0.15623674048447309 0.240016004602621 28.302149165565407 0.029864559300630804 0.08102631355232204 8.91630091261302e-07 6.049815283116639 0.29460690734415707 KEQTLQGAEEDEDLEGPPS(ph)YKPPTPK ddPTM_A549_MK2206_60min_R1 1 KEQTLQGAEEDEDLEGPPSYKPPTPK 26 2 Q92692 Q92692 PVRL2 Nectin-2 1 KEQTLQGAEEDEDLEGPPS(0.661)Y(0.002)KPPT(0.337)PK 100.36 1.4136e-12 44810000.0 1402.4 1502.4 2019.1 1578.3 2440.4 1736.3 1702.7 1893.1 2467.0 2150.2 2455.5 True False 1639.090834611875 1578.8657427307555 2305.438740979161 1964.9835708525784 2081.4203927783324 1920.0341135373392 2012.0585498942078 2161.4527223756018 1908.2284389894767 1664.4683266212444 1845.7315816476087 0.8880439880368336 0.8554146000586754 1.2490650124332763 1.0646096054218883 1.127693979706591 1.0402564124862639 1.0901143860247142 1.171054742665324 1.0338602091242757 0.9017932743695277 1.0 10.849977046756054 -5.692144122684495 24.99998312132565 1.0555283059294316 0.8717263446834826 0.4300527387632247 0.08803028785632315 34.546272272360525 12462.369231034447 0.011002271033967066 0.04261160846910932 2.031682675515743e-06 5.692144122684495 -0.18380196124594894 KEQTLQGAEEDEDLEGPPSYKPPT(ph)PK ddPTM_A549_MK2206_60min_R1 1 KEQTLQGAEEDEDLEGPPSYKPPTPK 26 2 Q92692 Q92692 PVRL2 Nectin-2 1 KEQTLQGAEEDEDLEGPPS(0.011)YKPPT(0.989)PK 148.95 5.6127999999999994e-33 43459000.0 1154.8 1909.6 1535.0 1964.4 2918.6 1719.3 1637.0 2159.6 3671.7 2587.1 2646.0 True False 1349.7020078506796 2006.7904834389299 1752.6860816220153 2445.6780881852665 2489.277806246041 1901.2351848210271 1934.4217103287813 2465.729913497621 2840.0658125000673 2002.6723131810152 1988.9251741150797 0.6786087407492312 1.0089823938860842 0.8812227349889254 1.2296481134708384 1.2515693594926618 0.9559108656095784 0.9725965237427555 1.2397298528813097 1.427939999685348 1.0069118432633102 1.0 10.957773285839423 -4.703377993121251 0.6286819985081079 1.185765189588373 6.232830400133195e-17 0.37184955165493094 0.15816445944351543 4.779407876032546 0.7897215252553589 0.0320886281476896 4.798230200949251 1.9798031316291614e-05 4.703377993121251 -1.185765189588373 KEQTLQGAEEDEDLEGPPSYKPPT(ph)PK ddPTM_A549_PD325901_60min_R1 1 KEQTLQGAEEDEDLEGPPSYKPPTPK 26 2 Q92692 Q92692 PVRL2 Nectin-2 1 KEQTLQGAEEDEDLEGPPS(0.001)YKPPT(0.999)PK 145.07 9.935e-33 18302000.0 2086.1 2260.0 2311.0 2036.5 3118.2 2221.4 2339.8 3242.9 2852.4 2553.0 3099.9 True False 2297.8793362943475 2450.458131470689 2467.8383571719337 2162.2899797729265 2899.1883892060127 2203.309654902822 2428.84236938769 3178.217815494164 2732.523547488198 2391.803144302295 2718.6319518851456 0.8452336973016737 0.9013570703351366 0.9077500746140693 0.795359584541614 1.066414446867538 0.8104479362772918 0.8934060999700564 1.1690504164384348 1.0051097742721002 0.8797818853867947 1.0 11.40866513733753 -8.061038875263241 24.999856645025062 1.015752036851462 0.8897672295905422 0.3033054940882589 0.09105402764239601 183.226631203574 75044.2085049318 0.012135946250272218 0.01566745315911193 8.688826489898553e-09 8.061038875263241 -0.12598480726091987 KERLES(ph)LNIQR ddPTM_A549_PD325901_60min_R1 1 KERLESLNIQR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 KERLES(1)LNIQR 41.838 0.027801999999999997 4701400.0 1376.6 1477.8 1623.6 1790.5 1984.2 2356.5 1859.2 1990.3 2060.7 1865.5 2021.2 True False 1516.3514186006407 1602.339392339552 1733.7872594999344 1901.0951184794626 1844.8366371183924 2337.3094452950836 1929.9528733932784 1950.6019051398546 1974.0959452772836 1747.7120116317785 1772.6052134424517 0.8554366235084243 0.9039460000389831 0.9781011848277645 1.0724864758732597 1.0407487370161037 1.318573040161582 1.0887663303467627 1.100415304179168 1.1136692650494529 0.9859567140940932 1.0 10.791655546206865 -5.927902211351314 1.7013353231105848 1.0804645007881328 0.859789278790366 0.49976913260509614 0.08286917705681414 0.28515415855554954 1.5035003649972223 0.012571551019399236 0.06720119868011125 1.1805864344595716e-06 5.927902211351314 -0.2206752219977668 KES(ph)APPSLR ddPTM_A549_MK2206_60min_R1 2 KESAPPSLR 9 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 KES(0.828)APPS(0.172)LR;KES(0.594)APPS(0.406)LR 85.522 0.00052977 44259000.0 12061.9 13241.599999999999 11926.0 10328.2 14237.4 10601.3 9607.9 9706.6 14479.2 14311.0 13399.4 True False 14097.653834858085 13915.540880553492 13617.286129918017 12858.609463650511 12143.097320169734 11723.122529426595 11353.531063327986 11082.540275215792 11199.68431853119 11078.13516057884 10071.959175373237 1.399693305879158 1.3816121211628942 1.3519997343926289 1.276674104784982 1.2056340885356842 1.1639366607134973 1.127241568957934 1.1003360996849063 1.1119668103813738 1.099898735458121 1.0 13.298056720061556 -4.570725951827181 0.20492387830973394 0.9893316752415068 1.9656033072808883 0.9367577859547027 0.031822594816505685 2.0111910002987106 0.05616514862478512 0.02246088091988509 0.523927664461814 2.6870394844078035e-05 4.570725951827181 0.9762716320393815 KES(ph)APPSLR ddPTM_A549_PD325901_60min_R1 1 KESAPPSLR 9 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 KES(0.964)APPS(0.036)LR 79.492 0.00073136 34972000.0 6353.2 5585.6 5643.9 5989.1 7017.8 6404.0 6369.1 5808.7 5883.1 6220.0 6019.0 True False 6998.172187021352 6056.318114664906 6026.928993527768 6359.033104767019 6524.893938095688 6351.847947239432 6611.4795858052485 5692.840921663 5635.853766031342 5827.26813848816 5278.70115758466 1.3257375210502462 1.147312176587783 1.1417446855971423 1.2046586679054738 1.2360794338055008 1.2032975077804564 1.2524822657000758 1.0784548607157438 1.0676591831559759 1.1039208253180417 1.0 12.365967277877603 -8.439875810711095 3.088625876858369 1.0323234956708358 1.2102203175945094 0.6369678097397315 0.05452870616861308 0.1027090540469015 1.9054824709884681 0.008825671529722684 0.010625713894287549 3.6318189411155654e-09 8.439875810711095 0.17789682192367362 KES(ph)APQVLLPEEEK ddPTM_A549_MK2206_60min_R1 2 KESAPQVLLPEEEK 14 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK 112.56 2.8577999999999996e-06 16162000.0 3436.0 3385.0 3960.5 3517.2 5770.200000000001 3984.3 4436.0 4845.7 6114.8 5145.2 5741.799999999999 True False 4015.912797865375 3557.282041496009 4522.158453592175 4378.914157893107 4921.411223737718 4405.915981435708 5241.9637794859345 5532.592814333869 4729.8075633290855 3982.8957465034073 4315.952594381691 0.93048121128418 0.824217125583519 1.0477776005878547 1.0145881035842184 1.1402838924005294 1.0208443872092403 1.2145554578865585 1.2818937866778113 1.0958896002440186 0.9228312080369369 1.0 12.075463303281797 -5.849481277659032 5.449534191616974 1.0769345779803867 0.878371267226544 0.38916463137687074 0.09910218653534579 0.1480246538973934 6.994110644999965 0.013538880505237006 0.04417884288199897 1.414225690718987e-06 5.849481277659032 -0.1985633107538427 KES(ph)APQVLLPEEEK ddPTM_A549_PD325901_60min_R1 2 KESAPQVLLPEEEK 14 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK 109.03 5.8699e-06 17592300.0 5299.4 6035.700000000001 5479.4 5338.8 6827.2 5619.2 5715.0 5951.5 6563.6 6305.3 7134.6 True False 5837.391186787913 6544.349621290995 5851.265034308907 5668.565550705476 6347.681024561383 5573.4390982398245 5932.487452367999 5832.792663638574 6287.75471753384 5907.182281930767 6257.089429955724 0.9329243655750689 1.045909555001726 0.9351416660749743 0.9059428691505194 1.0144782323506443 0.8907398816384287 0.9481225286578616 0.932189435508811 1.0049008868934024 0.9440782888047307 1.0 12.611276008682015 -8.773774299758381 24.883318057110802 1.0023143136331563 0.9518893450552651 0.047370119005850864 0.04577952847328938 219.23133165127643 442255.0475709835 0.006967878546119521 0.007444325333949642 1.683548763973122e-09 8.773774299758381 -0.05042496857789114 KES(ph)APQVLLPEEEKIIVEETK ddPTM_A549_MK2206_60min_R1 2 KESAPQVLLPEEEKIIVEETK 21 2 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KES(1)APQVLLPEEEKIIVEETK;KES(1)APQVLLPEEEKIIVEETK 92.833 4.1555e-07 7006600.0 790.77 1055.26 1003.44 814.79 1415.1100000000001 941.55 578.97 540.99 1278.38 1337.0900000000001 1075.1399999999999 True False 924.2326435296865 1108.9682266201119 1145.742880614199 1014.4135865773129 1206.949193584882 1041.1841960496934 684.1613546909314 617.6769892123905 988.8289711533718 1035.040440350665 808.1530656455352 1.1436356339147578 1.372225477774179 1.4177300431311295 1.2552245727942901 1.4934660832113495 1.2883502399610622 0.8465739768547906 0.7643069307903986 1.2235664420372105 1.2807480220642324 1.0 9.658484757669992 -7.583696414526622 10.19719056553943 1.059722548647612 1.343675609104612 0.46351460150250723 0.16196229250051836 0.32240963687151064 52.13330346981241 0.02525839649564624 0.03747618240441117 2.607975970015833e-08 7.583696414526622 0.283953060457 KES(ph)APQVLLPEEEKIIVEETK ddPTM_A549_PD325901_60min_R1 4 KESAPQVLLPEEEKIIVEETK 21 2 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KES(1)APQVLLPEEEKIIVEETK;KES(1)APQVLLPEEEKIIVEETK;KES(1)APQVLLPEEEKIIVEETK;KES(1)APQVLLPEEEKIIVEETK 142.94 3.0751e-22 13611200.0 3561.1299999999997 3374.25 3554.65 3962.11 4118.83 4581.59 4232.73 4717.66 4349.26 4562.08 4304.0 True False 3922.653296034654 3658.6098894314036 3795.8899248469093 4206.840536095316 3829.537589992115 4544.279050061325 4393.80885638873 4623.562570367326 4166.475727159065 4274.029490230554 3774.635285303932 1.0392138576426209 0.969261826083103 1.0056309121110931 1.114502519614046 1.014545062115521 1.203898842294487 1.1640353370020868 1.2249031286197598 1.1038088218431896 1.1323026377862122 1.0 11.882121539032898 -6.239034864104667 18.38532121012699 1.0828856044316177 1.0011573946059118 0.23253927203028968 0.07342528825828754 42.963284181490465 35251.71186950109 0.011980537456691148 0.03159849617827577 5.767201638418786e-07 6.239034864104667 -0.08172820982570594 KES(ph)DIRPSK ddPTM_A549_MK2206_60min_R1 4 KESDIRPSK 9 2 A0A2R8YFA9;O94851-5;O94851-6;O94851-4;O94851-3;O94851;O94851-2 A0A2R8YFA9 MICAL2 Protein-methionine sulfoxide oxidase MICAL2 1 KES(0.98)DIRPS(0.02)K;KES(1)DIRPSK;KES(0.999)DIRPS(0.001)K;KES(0.999)DIRPS(0.001)K 107.99 9.503200000000001e-05 90168000.0 17168.6 18334.5 17225.2 16150.800000000001 21923.5 17476.600000000002 14720.500000000002 17203.4 22674.6 23153.4 22422.1 True False 20066.23994803012 19267.6477370188 19667.992373391222 20107.746725036966 18698.582191884845 19325.96221197181 17395.02430476167 19642.034633202908 17538.839303895747 17923.03085926533 16854.07375152142 1.1905869313179396 1.1432041903388197 1.166957773138722 1.193049646126168 1.109439917467842 1.1466641535389777 1.0320961306575165 1.1654176267876968 1.0406290824681192 1.0634242571560728 1.0 14.040809722931773 -8.318408013185179 0.395427928407881 0.9955370604322522 1.1840809128283671 0.5647143533066602 0.04319399090209396 0.3707404171557948 0.14626842413097574 0.017406091717971115 0.023675035871395744 4.803878191926853e-09 8.318408013185179 0.18854385239611493 KES(ph)DIRPSK ddPTM_A549_PD325901_60min_R1 4 KESDIRPSK 9 2 A0A2R8YFA9;O94851-5;O94851-6;O94851-4;O94851-3;O94851;O94851-2 A0A2R8YFA9 MICAL2 Protein-methionine sulfoxide oxidase MICAL2 1 KES(1)DIRPSK;KES(1)DIRPSK;KES(0.999)DIRPS(0.001)K;KES(0.999)DIRPS(0.001)K 102.87 0.00013852 119587000.0 19598.8 19794.8 20883.100000000002 19983.0 24734.5 21878.1 21727.600000000002 22794.699999999997 22006.699999999997 21834.6 23797.600000000002 True False 21588.45574812599 21462.977265856636 22300.35274628177 21217.30452531422 22997.23404939265 21699.932007260937 22554.45570779894 22340.041826403776 21081.834929360717 20455.959629683846 20870.646065415633 1.0343932660474668 1.02838106681434 1.0685032306323894 1.0166098576350748 1.1018937304246152 1.0397345601686716 1.0806783669803839 1.0704049005662097 1.010118942330925 0.9801306373347515 1.0 14.349187640370367 -8.830896912321956 6.4390580610843715 1.0045279691718902 1.0552090626162385 0.5178247193650568 0.024777528593806213 0.1224881253704263 8.85839437816 0.003930706565585714 0.00417981119431846 1.4760568605833547e-09 8.830896912321956 0.050681093444348235 KES(ph)ETQCQTENKYDSVSGEANDSSWNDIK ddPTM_A549_MK2206_60min_R1 1 KESETQCQTENKYDSVSGEANDSSWNDIK 29 2 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 KES(0.852)ET(0.146)QCQT(0.001)ENKYDSVSGEANDSSWNDIK 122.37 1.8351e-21 12197000.0 1064.3 1065.0 971.08 745.14 2140.9 1757.0 1052.8 1272.8 1284.7 1890.6 1884.3 True False 1243.9278203632482 1119.203951017209 1108.7937460205255 927.699333450606 1825.976446033082 1942.924573797791 1244.0801323360677 1453.223297786522 993.7175012443385 1463.5121469212747 1416.376305965625 0.8782467026057678 0.7901882757451123 0.7828383893110928 0.654980833513831 1.2891887829119035 1.3717573257999311 0.8783542389802311 1.0260149733271458 0.7015914464672326 1.0332791792386802 1.0 10.46798889939468 KES(ph)KEEET(ph)SIDVAGKPNEVTK ddPTM_A549_MK2206_60min_R1 2 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 2 KES(0.966)KEEET(0.541)S(0.494)IDVAGKPNEVTK;KES(0.763)KEEET(0.689)S(0.547)IDVAGKPNEVTK 65.581 0.0019050999999999998 12559000.0 3083.2 3658.6000000000004 3328.3 2939.1000000000004 3486.8 3395.5 3324.3 4074.1 4980.3 5123.3 4763.1 True False 3603.5687829972417 3844.8071128559236 3800.3029872720226 3659.179631941214 2973.896338936031 3754.8095562495164 3928.282279563817 4651.616151407971 3852.2700019048634 3965.9429717136195 3580.290815127562 1.0065016975077345 1.0738812323878046 1.0614509221471222 1.0220341924405494 0.8306298265969421 1.0487442920515206 1.0971964240910013 1.299228579911389 1.0759656689417871 1.107715316017511 1.0 11.805861062236048 -7.504232938415063 24.720047690707084 1.065257103958588 1.0010117144157473 0.17606799702911569 0.09553846020423212 1420.518113591329 1883281.4580163497 0.015749107837840278 0.024907891463938625 3.131605604163912e-08 7.504232938415063 -0.06424538954284076 KES(ph)KEEET(ph)SIDVAGKPNEVTK ddPTM_A549_PD325901_60min_R1 2 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 2 KES(1)KEEET(0.534)S(0.466)IDVAGKPNEVTK;KES(0.963)KEEET(0.518)S(0.518)IDVAGKPNEVTK 106.04 4.0599e-09 29273000.0 4094.3999999999996 4236.200000000001 4497.200000000001 4655.0 5616.3 5192.1 4337.1 5022.9 4811.5 5607.3 5281.6 True False 4510.060473862026 4593.199440945193 4802.407035860499 4942.528777727952 5221.830463183166 5149.817259035271 4502.150713852186 4922.714319111176 4609.289387441965 5253.254121052199 4631.996682820926 0.9736752382809047 0.9916240782253528 1.0367898262258235 1.0670406557195349 1.12733899023499 1.1117920870139715 0.9719676032043997 1.0627629197940618 0.9950977306475245 1.1341230317662752 1.0 12.177418504811449 -8.686371447376507 1.6064358465421777 0.9971213899142035 1.0463232700040659 0.0 0.06386016920542466 0.5176332997744865 2.611879501116248 0.00984983805619247 0.0108709203259165 2.0588682322572743e-09 8.686371447376507 0.04920188008986237 KES(ph)KEEETSIDVAGKPNEVTK ddPTM_A549_MK2206_60min_R1 6 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 KES(1)KEEETSIDVAGKPNEVTK;KES(1)KEEETSIDVAGKPNEVTK;KES(1)KEEETSIDVAGKPNEVTK;KES(1)KEEETSIDVAGKPNEVTK;KES(1)KEEETSIDVAGKPNEVTK;KES(0.999)KEEET(0.001)SIDVAGKPNEVTK 213.11 8.330699999999998e-68 500867000.0 24370.8 25721.999999999996 24814.4 21793.4 29737.0 27205.7 27171.899999999998 27086.699999999997 33382.399999999994 34407.5 33327.4 True False 28483.99523114595 27031.139932455055 28333.455051336383 27132.783978342915 25362.726692365715 30084.589116317933 32108.682511229483 30926.32267453975 25821.339700738685 26634.82185295344 25051.286790552873 1.137027230149614 1.079031993783601 1.131017950823239 1.0830894318999613 1.0124320919885956 1.200919911533773 1.2817178925650252 1.2345203235708604 1.03073905610614 1.0632117254351077 1.0 14.612597090701236 -8.903291154024018 8.243786466351297 1.0134977569789543 1.1421654720280212 0.3190298003254669 0.07297874167187382 0.20103059157840422 15.293141061381839 0.013670331274874633 0.014519626180176937 1.2494211288165646e-09 8.903291154024018 0.12866771504906693 KES(ph)KEEETSIDVAGKPNEVTK ddPTM_A549_PD325901_60min_R1 4 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 KES(1)KEEETSIDVAGKPNEVTK;KES(1)KEEETSIDVAGKPNEVTK;KES(1)KEEETSIDVAGKPNEVTK;KES(0.999)KEEET(0.001)SIDVAGKPNEVTK 229.82 1.4018999999999998e-76 841920000.0 30213.8 27603.499999999996 27890.600000000002 30691.7 33105.3 26079.9 29965.100000000006 30911.699999999997 30992.500000000004 31051.0 33033.799999999996 True False 33281.08273377603 29929.743819491676 29783.423835802463 32587.456603091927 30780.09793508494 25867.513941163277 31105.438278031914 30295.141893740467 29689.99300432196 29090.434560803173 28970.85201851141 1.148778182723467 1.0330985019138397 1.0280479088696406 1.1248359759067363 1.0624505594594693 0.892880676227085 1.0736804791987675 1.0457111124789453 1.024822914609175 1.0041276846885743 1.0 14.82231449373339 -2.0000000000000004 0.36045634078107025 1.0117757707545252 2.351520709099367 0.2683246992253431 0.05510545017237506 56.18466760517641 0.684607447248231 0.013491477490853426 52.437023979874 0.00999999999999999 2.0000000000000004 1.3397449383448419 KES(ph)KEETPEVTK ddPTM_A549_MK2206_60min_R1 4 KESKEETPEVTK 12 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KES(0.998)KEET(0.002)PEVTK;KES(1)KEETPEVTK;KES(0.995)KEET(0.005)PEVTK;KES(0.999)KEET(0.001)PEVTK 135.23 7.8369e-09 304599000.0 13193.1 13184.9 13136.999999999998 10400.7 13873.7 10417.6 10910.3 12219.5 14957.1 14502.2 15704.099999999999 True False 15419.772739673377 13855.95509273877 15000.024139588542 12948.87196690516 11832.89710837926 11519.983517356788 12892.56028478932 13951.651545649283 11569.340731580663 11226.142947784676 11804.338558889112 1.3062801158021435 1.1738019054277897 1.2707212746192338 1.0969587073690097 1.0024193265338566 0.9759109720452576 1.0921882848811326 1.1819087936225925 0.9800922494609843 0.9510183812316164 1.0 13.527029583797468 -3.681484465959499 0.31780234732700047 0.9918441128186363 2.11058573312173 0.6265065109745942 0.07254270969778741 8.242948024415371 0.265954737672077 0.02351656771252216 4.400486776743138 0.00020821668797703092 3.681484465959499 1.1187416203030938 KES(ph)KEETPEVTK ddPTM_A549_PD325901_60min_R1 4 KESKEETPEVTK 12 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KES(1)KEETPEVTK;KES(1)KEETPEVTK;KES(1)KEETPEVTK;KES(0.58)KEET(0.42)PEVTK 168.42 2.8698000000000003e-16 463855000.0 26587.7 27772.0 28370.600000000002 26849.7 31677.0 28417.800000000003 31318.1 35710.9 34014.1 38892.5 41207.7 True False 29286.86373116974 30112.443905842465 30295.99952227695 28508.144988907014 29452.116799717445 28186.37485869158 32509.927433421904 34998.61808484092 32584.605664218976 36436.82091256441 36139.41413713267 0.8103856808535796 0.8332299962467408 0.8383090939802562 0.7888380503549821 0.8149583357372655 0.7799344713153645 0.8995698521858017 0.9684334658009965 0.9016362451415286 1.0082294299045143 1.0 15.141285498139778 -8.68067808688941 0.4151832174211172 0.991213678893183 0.8010661059109844 0.7790665493039785 0.03768798909110744 0.3671600911563579 0.16316251346170735 0.02111419579284847 0.02114409573113438 2.0860365479083685e-09 8.68067808688941 -0.19014757298219864 KES(ph)KGPIVPLNVADQK ddPTM_A549_MK2206_60min_R1 3 KESKGPIVPLNVADQK 16 2 G3XAL9;P55011 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 KES(1)KGPIVPLNVADQK;KES(1)KGPIVPLNVADQK;KES(1)KGPIVPLNVADQK 187.19 6.7947e-35 83214700.0 16921.8 19065.0 18409.1 15168.1 26264.0 18699.1 19629.2 18723.1 27285.3 23415.3 21907.7 True False 19777.786141710818 20035.32706680103 21019.7871955621 18884.28518092188 22400.600391710428 20677.826350542 23195.571555519684 21377.15676208896 21105.223115670684 18125.76746736788 16467.413468239203 1.2010256607606502 1.2166650886275057 1.2764474054230246 1.1467669295693652 1.3602986549718084 1.255681494268875 1.4085740666108322 1.298149026458782 1.2816355863278985 1.1007051898178881 1.0 14.007326348724957 -10.572728190594088 0.8366787236131144 0.9975681848123975 1.273150976589317 0.5591593881926833 0.07397129274425399 0.29060530224276565 0.35932327477323994 0.04942158612567829 0.013256196433652122 2.6746798715369463e-11 10.572728190594088 0.27558279177691947 KES(ph)KGPIVPLNVADQK ddPTM_A549_PD325901_60min_R1 3 KESKGPIVPLNVADQK 16 2 G3XAL9;P55011 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 KES(1)KGPIVPLNVADQK;KES(1)KGPIVPLNVADQK;KES(1)KGPIVPLNVADQK 166.34 6.5023e-22 155875300.0 20979.0 20936.100000000002 24851.3 23278.9 27822.3 26828.2 23864.499999999996 26652.2 27856.9 24380.7 24105.699999999997 True False 23108.772636076472 22700.458622249345 26537.858661006863 24716.78478278223 25868.157629724366 26609.720034061345 24772.676606655463 26120.600962753582 26686.171367979216 22841.298441163708 21140.851718622456 1.0930861700203176 1.073772188764423 1.2552880562342867 1.1691480131337293 1.2236100027577292 1.2586872273751155 1.1717917961097954 1.235551022750166 1.2623035118529318 1.0804341634468477 1.0 14.36774588046495 -10.877244278043179 1.1111370047286264 0.9993533724222553 1.199435125638297 0.437396911124351 0.06505100381153127 0.29825592996812644 0.6503838231885146 0.04622434819139987 0.011000985099568303 1.3266480468041538e-11 10.877244278043179 0.2000817532160416 KES(ph)LKVQK ddPTM_A549_PD325901_60min_R1 2 KESLKVQK 8 2 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VUA7;F8VVE7;F8VZ43 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 KES(1)LKVQK;KES(1)LKVQK 93.05799999999999 0.0019389 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KES(ph)LSPGK ddPTM_A549_MK2206_60min_R1 1 KESLSPGK 8 1 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;H7BXY5 E7ETM8 NEXN Nexilin 1 KES(0.987)LS(0.013)PGK 51.927 0.022659000000000002 80130000.0 1587.2 1596.9 1851.8 1928.5 2315.8 1580.4 2122.4 1568.0 2048.7 2169.7 2468.1 True False 1855.08055668566 1678.1753890886202 2114.4130853079137 2400.9825865736548 1975.1488877217093 1747.6368790153845 2508.0126072094135 1790.2688017986054 1584.6727211016375 1679.5632630779053 1855.2026539053004 0.9999341865863638 0.9045779368393915 1.139720817484258 1.294188848598 1.064653979210258 0.9420193935883585 1.3518806702491037 0.9649990517370133 0.8541776919981313 0.9053260351597359 1.0 10.85736107356485 -8.499617835127616 24.973139549247314 0.9300051828136146 1.098320294999539 0.28044060512601765 0.13087427028468107 796.3482485941577 854968.7154110209 0.022167979303300687 0.02671014225001766 3.1650615852929185e-09 8.499617835127616 0.16831511218592443 KES(ph)PLLFK ddPTM_A549_MK2206_60min_R1 1 KESPLLFK 8 1 P26038;V9GZ54 P26038 MSN Moesin 1 KES(1)PLLFK 53.683 0.010259 1328600.0 1041.2 989.55 1302.2 862.23 1458.0 1058.8 1301.6 1123.9 1713.4 1693.4 1351.2 True False 1216.929105104026 1039.9138682902144 1486.8715410346504 1073.4763887069753 1243.5301314009205 1170.8415132254418 1538.0838718167035 1283.2162667993962 1325.3176357375646 1310.859763882623 1015.6597487771335 1.1981661245995257 1.0238801621726992 1.4639465065193944 1.0569252055124305 1.2243570082383846 1.15278912513285 1.5143692301172464 1.2634312508144623 1.3048834881300189 1.290648532110201 1.0 9.98820145747477 -10.797498356306901 1.0459876912205561 1.0001193798333035 1.247195622987385 0.0 0.16449532947838422 0.5195419970262087 1.0097280851479553 0.09383748610908055 0.02351925459719942 1.5940489137666296e-11 10.797498356306901 0.2470762431540816 KES(ph)PLLFK ddPTM_A549_PD325901_60min_R1 1 KESPLLFK 8 1 P26038;V9GZ54 P26038 MSN Moesin 1 KES(1)PLLFK 54.7 0.009371700000000002 2743200.0 1956.7 1946.9 2154.0 1551.3 2291.7 2174.8 1929.7 2103.8 2426.9 2469.4 2235.2 True False 2155.3427435535928 2110.9720956461447 2300.183393054237 1647.1202777420763 2130.738897935803 2157.089149852643 2003.1357894723583 2061.8380586008266 2324.905832772088 2313.4816625695585 1960.284570100221 1.0995050292332809 1.076870229886174 1.1733925921462711 0.8402454943864942 1.0869538690634428 1.100395923507351 1.0218596932433879 1.051805482759788 1.1860042507263249 1.1801764385929336 1.0 10.936847386998375 KES(ph)PPKPK ddPTM_A549_PD325901_60min_R1 2 KESPPKPK 8 2 Q68EM7-2 Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 KES(1)PPKPK;KES(1)PPKPK 61.353 0.0022335000000000002 33404000.0 12687.8 11332.599999999999 10591.599999999999 9486.2 12929.3 10972.2 9655.3 10808.7 11149.0 13266.9 15383.599999999999 True False 13975.856115735303 12287.637973763158 11310.409668464838 10072.141029276674 12021.190571663567 10882.846041021317 10022.737725082887 10593.11199923888 10680.446301691869 12429.225669856687 13491.514724675095 1.035899704439738 0.9107678585036767 0.8383350497908764 0.7465537587751647 0.8910186007266921 0.8066437507656058 0.7428919531734978 0.785168471844364 0.7916417481395202 0.9212624322400546 1.0 13.719764711756968 -10.803029333372614 1.0652305845598802 0.9993874366536875 0.8323156473592548 0.22275066740920058 0.08321286211948359 0.45771494218785874 0.9272699350906545 0.05639362673851322 0.01428428173253196 1.5738765571826106e-11 10.803029333372614 -0.16707178929443267 KES(ph)YSIYVYK ddPTM_A549_MK2206_60min_R1 2 KESYSIYVYK 10 1 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 KES(0.882)YS(0.118)IYVYK;KES(0.88)YS(0.118)IY(0.002)VYK 72.937 0.00079136 7369500.0 2763.0 3730.8999999999996 4104.1 3033.7 5058.1 4661.5 4526.7 4229.799999999999 6077.4 5654.200000000001 5966.299999999999 True False 3229.326851135635 3920.7868740376557 4686.123092889193 3776.9566361879656 4314.060190424554 5154.776835946733 5349.142795446123 4829.387103219226 4700.87860361356 4376.912292987555 4484.703048496897 0.7200759595929062 0.8742578564598062 1.0449126825598416 0.8421865607030232 0.9619500207199814 1.1494131897259996 1.192752950998384 1.0768577207888612 1.0482028693492016 0.9759647953624332 1.0 12.130796745917204 -7.005853437020483 6.733044894384539 1.0502076963245128 0.8848758888094453 0.5062833384765326 0.09226246972928293 0.11197301229947386 26.878926329554176 0.013944776336311762 0.02546897450593079 9.866123852191182e-08 7.005853437020483 -0.16533180751506749 KES(ph)YSIYVYK ddPTM_A549_PD325901_60min_R1 1 KESYSIYVYK 10 1 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 KES(0.566)YS(0.434)IYVYK 93.348 0.00025138 4893300.0 3500.5 3562.2 3203.2 3385.1 3994.1 3456.8 3371.4 3583.7 4860.9 4738.6 4173.0 True False 3855.868183068101 3862.3990955419868 3420.5884144063753 3594.189938880103 3713.5681948969727 3428.6489668983872 3499.7004719008673 3512.2202921417356 4656.613277235093 4439.403987305468 3659.747454826514 1.0535885961155438 1.0553731215655915 0.934651490745698 0.9820868743661662 1.0147061349819315 0.9368539794669843 0.9562682985913208 0.9596892505546474 1.2723865060945398 1.2130356102716144 1.0 11.83752838173967 -8.720790902026627 24.99986901677327 1.1286271191117097 0.9853197040379015 0.5097096280094375 0.07458723550473399 138.72883826776314 85321.71167310677 0.017253069114218336 0.019563034741241655 1.901993804622836e-09 8.720790902026627 -0.14330741507380818 KES(ph)YSVYVYK ddPTM_A549_MK2206_60min_R1 3 KESYSVYVYK 10 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 1 KES(0.605)Y(0.001)S(0.378)VY(0.015)VYK;KES(0.968)YS(0.031)VYVY(0.001)K;KES(0.967)YS(0.032)VYVY(0.001)K 97.551 0.00021458 31275000.0 7916.2 9924.5 9826.9 8992.3 12765.699999999999 10087.8 9177.7 10980.4 13902.099999999999 13235.099999999999 13348.300000000001 True False 9252.261027491817 10429.614659033132 11220.502185987865 11195.41390367969 10887.882440620537 11155.284300260304 10845.169291926986 12536.905326064678 10753.296547091859 10245.281717823846 10033.548715661494 0.922132466756238 1.0394741635881444 1.1182984708564419 1.1157980312792646 1.085147712855124 1.111798488888371 1.080890679784972 1.249498625196852 1.0717341243688687 1.0211025040255053 1.0 13.292544335349643 -4.292033348773784 12.81582389896298 1.0626652401259569 1.072354708862355 0.0 0.0798296438656677 0.0 0.0 0.010962276404778062 0.0 5.104658006237321e-05 4.292033348773784 0.009689468736398199 KES(ph)YSVYVYK ddPTM_A549_PD325901_60min_R1 2 KESYSVYVYK 10 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 1 KES(0.703)YS(0.286)VY(0.001)VY(0.01)K;KES(0.98)YS(0.019)VYVY(0.001)K 93.348 0.00025138 31140000.0 7774.7 8584.5 7922.9 8586.1 10493.3 9549.6 7964.6 8462.7 9378.4 9954.599999999999 10175.6 True False 8563.981820568366 9307.945942305372 8460.595638268063 9116.443896552091 9756.286807919783 9471.831223759793 8267.69721139635 8293.904809640278 8984.258462264514 9326.064857137331 8924.065708443008 0.9596502424299758 1.0430162939633196 0.948065143700538 1.0215572357257607 1.0932558238213572 1.0613807129186137 0.9264496118147503 0.9293863448129324 1.0067449922252991 1.0450466370181468 1.0 13.123485420935296 -7.720002870666743 24.99996363331369 0.9913248671375618 1.0221213472958384 0.12067419003235902 0.05015391199672427 311.5858718091658 187989.09026189722 0.007634623987215566 0.011323930176763418 1.9054481229963216e-08 7.720002870666743 0.030796480158276518 KESAPPS(ph)LR ddPTM_A549_PD325901_60min_R1 1 KESAPPSLR 9 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 KES(0.465)APPS(0.535)LR 77.124 0.00081054 32837000.0 5671.3 6132.0 7038.4 5857.9 7516.9 6623.8 7629.1 6814.2 6243.1 7170.6 6440.0 True False 6247.0462010096 6648.765160255871 7516.0681493374805 6219.729178743838 6988.938875897214 6569.857968913889 7919.429575303711 6678.28543536351 5980.724217965066 6717.847092257745 5647.920826523546 1.1060789258362944 1.177205800943986 1.330767264661504 1.101242274773929 1.2374357025466842 1.1632347851019402 1.4021849488599052 1.1824325518164502 1.058924939223408 1.1894371926585185 1.0 12.463504149478254 -8.780140898346872 3.3649561772839864 1.0252917472651386 1.2187432773654876 0.2129575649822737 0.09806901783928024 0.13594348613791601 3.1193423976987256 0.014637347281249723 0.015839753225342482 1.6590485742689096e-09 8.780140898346872 0.193451530100349 KESESEDS(ph)SDDEPLIK ddPTM_A549_PD325901_60min_R1 1 KESESEDSSDDEPLIK 16 1 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;P35659-2 A0A494C198 DEK Protein DEK 1 KESESEDS(0.843)S(0.157)DDEPLIK 122.77 2.7428e-08 11191000.0 3094.4 3201.3 3263.3 3526.5 3506.2 3796.9 3714.6 3560.7 3641.4 3608.2 4318.8 True False 3408.541210023121 3471.0847859633263 3484.7671618170352 3744.3238957374065 3259.936607733349 3765.979305258183 3855.9611357071153 3489.6790451848897 3488.3646213096035 3380.3776362207363 3787.6149791288653 0.899917554663138 0.9164302087435667 0.9200426075563035 0.9885703579614062 0.8606832071624978 0.9942877842679622 1.018044642064957 0.9213394350836316 0.9209924030113303 0.8924818533160961 1.0 11.887073969234796 KESGVAGDPWKEET(ph)DTDLEVVLEK ddPTM_A549_PD325901_60min_R1 1 KESGVAGDPWKEETDTDLEVVLEK 24 2 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 KESGVAGDPWKEET(0.5)DT(0.5)DLEVVLEK 85.98200000000001 8.865100000000001e-07 3670500.0 1258.9 1230.9 1169.7 1451.7 1639.6 1042.8 1121.2 1104.3 1499.0 1771.0 1506.0 True False 1386.7026012468016 1334.6322628439264 1249.082875977503 1541.36821195009 1524.4401523129302 1034.3077825392386 1163.8678795441813 1082.2738701934095 1436.0022429129176 1659.178757759249 1320.771547320568 1.0499185904329837 1.0104944080234597 0.9457221262159236 1.1670210605892015 1.1542042644737025 0.7831087705042747 0.881203022510066 0.8194254883738253 1.0872449863309945 1.2562193371936299 1.0 10.367165231148203 -3.9928139456278733 2.2775753221713417 1.0095887304360123 9.304896187131728 0.006208498388751593 0.14164433286704603 2316.6191312158 69.75394094331239 0.017626636757303006 98963.26709064933 0.00010166841532025993 3.9928139456278733 8.295307456695715 KESGVAGDPWKEETDT(ph)DLEVVLEK ddPTM_A549_MK2206_60min_R1 1 KESGVAGDPWKEETDTDLEVVLEK 24 2 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 KES(0.028)GVAGDPWKEET(0.465)DT(0.507)DLEVVLEK 47.159 0.0038825 1770600.0 951.2 1370.6 1145.6 992.56 1490.3 1336.0 880.16 1146.5 2193.3 1514.7 1848.1 True False 1111.7393053927665 1440.3576856940717 1308.0633062580985 1235.7372445577116 1271.0788441884717 1477.3746332349738 1040.0736790244234 1309.0198860089934 1696.5210519803884 1172.5282179951632 1389.1657650347984 0.800292760860629 1.0368508366299907 0.9416178682069175 0.8895534828608137 0.9149943629345282 1.0634977267799035 0.7487037941784938 0.9423064683545542 1.2212516998919065 0.8440520544830671 1.0 10.44000304677812 -8.638418223486266 7.942395223645435 1.1042600179852777 0.9189045675515258 0.022137645743229406 0.12489415713113562 0.18536527877809938 12.249149955259703 0.018523567216051175 0.020999108526202317 2.2992266068554974e-09 8.638418223486266 -0.1853554504337519 KESGVAGDPWKEETDT(ph)DLEVVLEK ddPTM_A549_PD325901_60min_R1 1 KESGVAGDPWKEETDTDLEVVLEK 24 2 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 KES(0.061)GVAGDPWKEET(0.417)DT(0.522)DLEVVLEK 71.085 3.7905e-05 3587900.0 1530.0 1105.4 1349.6 1474.0 1341.0 1409.8 1194.2 1519.5 1287.7 1588.0 1645.8 True False 1685.3244736735312 1198.555937401638 1441.1919718040845 1565.0456323031156 1246.812786198854 1398.3190562176999 1239.645934491315 1489.192380475311 1233.582447097374 1487.733408990224 1443.377033585784 1.1676259455831002 0.8303831289486874 0.9984861462176164 1.0842943984047397 0.8638164230044557 0.968782946991926 0.8588510871699688 1.0317417735099386 0.8546501838350462 1.0307309693671969 1.0 10.495232489158346 -6.767122294786014 24.999879781064013 0.9310126164096639 1.0050884363347534 0.10735509644338392 0.09774149160360986 227.07410906270027 998933.1204402619 0.01329859976868229 0.02563826669603327 1.7095338525707466e-07 6.767122294786014 0.07407581992508949 KESKEEET(ph)SIDVAGKPNEVTK ddPTM_A549_MK2206_60min_R1 1 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 KES(0.003)KEEET(0.568)S(0.428)IDVAGKPNEVTK 114.83 6.9194e-15 9293300.0 5853.1 5478.7 5349.5 5222.8 8044.4 6161.7 4836.2 5539.5 8824.1 8609.1 9129.3 True False 6840.960185444071 5757.542428580261 6108.139539828648 6502.386234460405 6861.079416352238 6813.727004194564 5714.874939213229 6324.741089007258 6825.455439192153 6664.2983307203785 6862.242854137861 0.9968985841588283 0.8390175852066387 0.8901083318765821 0.9475599119228976 0.9998304580863205 0.9929300301702317 0.8327998674321498 0.9216725819013393 0.9946391557792907 0.9711545441301127 1.0 12.744464468304754 -8.768293998056766 11.875388476547498 0.9974765738474386 0.9254854958048041 0.18881665939479242 0.055353157071760625 0.28880380058472527 480.06441732902414 0.00948907842545672 0.010305294517570169 1.7049278379072534e-09 8.768293998056766 -0.0719910780426345 KESKEEETS(ph)IDVAGKPNEVTK ddPTM_A549_MK2206_60min_R1 4 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 KESKEEET(0.152)S(0.848)IDVAGKPNEVTK;KESKEEET(0.169)S(0.831)IDVAGKPNEVTK;KES(0.001)KEEET(0.155)S(0.844)IDVAGKPNEVTK;KES(0.119)KEEET(0.103)S(0.778)IDVAGKPNEVTK 138.92 5.1745e-19 109765000.0 12460.800000000001 13073.1 12591.100000000002 11783.500000000002 16599.5 14255.3 13989.2 14108.199999999999 19979.0 20278.600000000002 19775.899999999998 True False 14563.878402689441 13738.464950275182 14376.707310951768 14670.458028981415 14157.735539224694 15763.786384097697 16530.856560862183 16108.080554550443 15453.788399907073 15697.650175900644 14864.99824292606 0.9797430288711998 0.9242157130299715 0.9671516320422937 0.9869128666707228 0.9524209359366768 1.0604633869768099 1.1120658267638122 1.083624786986836 1.0396091642500669 1.0560142638005912 1.0 13.85963167226544 -7.253509592632671 24.772151759764608 1.0349399495715457 0.9616451491000452 0.6266169461928293 0.03456108031902031 404.33619526042344 1263119.1457884598 0.006145713499108424 0.010522914805669515 5.578152810632039e-08 7.253509592632671 -0.0732948004715005 KESKEEETS(ph)IDVAGKPNEVTK ddPTM_A549_PD325901_60min_R1 4 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 KESKEEET(0.022)S(0.978)IDVAGKPNEVTK;KESKEEET(0.286)S(0.714)IDVAGKPNEVTK;KESKEEET(0.153)S(0.847)IDVAGKPNEVTK;KES(0.001)KEEET(0.072)S(0.928)IDVAGKPNEVTK 159.66 2.9812999999999997e-28 255911000.0 27235.199999999997 27843.0 28204.3 27724.8 33743.7 32341.7 29394.0 31141.5 31146.5 33796.2 34292.0 True False 30000.09745450546 30189.427325017004 30118.413404233812 29437.297928410717 31373.658921445363 32078.31991805645 30512.60475501398 30520.358352465868 29837.52091987138 31662.302164304438 30074.30139489835 0.9975326462477536 1.0038280500220758 1.0014667675486868 0.978819010352949 1.0432049113788369 1.06663558021993 1.014574016345729 1.0148318310610263 0.9921268171147897 1.0528025821299865 1.0 14.876243604537777 -4.076342811120432 13.014522691166984 1.0050635487430446 0.75607250503481 0.0 0.028064397337251034 0.0 0.0 0.003404226409850786 0.0 8.387976187434599e-05 4.076342811120432 -0.24899104370823455 KESLS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 KESLSPGK 8 1 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;H7BXY5 E7ETM8 NEXN Nexilin 1 KES(0.467)LS(0.533)PGK;KES(0.198)LS(0.802)PGK 80.014 0.0016677 1713460000.0 10665.400000000001 8995.0 7968.7 6707.799999999999 9892.2 10222.9 9750.4 11084.2 8936.3 11377.4 10851.1 True False 12465.458776005056 9452.80707924863 9098.781484443878 8351.211301124582 8437.070484118105 11304.680492588184 11521.921468778108 12655.419293938849 6912.242318338742 8807.237438052522 8156.472394875333 1.5282904388712253 1.1589332522216071 1.115528998805978 1.0238753834772496 1.0344018928353231 1.385976675368981 1.4126108580980754 1.5515799822837848 0.8474548780035921 1.0797851095022477 1.0 12.993729618379508 -8.787866838598056 24.999809864088203 0.9279647607851255 1.258830747679008 0.3374446601442055 0.183137536464156 164.11827594903937 155251.61971350008 0.033112107343985175 0.035255504821002516 1.6297956765861093e-09 8.787866838598056 0.33086598689388247 KESVS(ph)PEDSEK ddPTM_A549_MK2206_60min_R1 3 KESVSPEDSEK 11 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 KES(0.011)VS(0.978)PEDS(0.011)EK;KES(0.005)VS(0.993)PEDS(0.002)EK;KES(0.092)VS(0.905)PEDS(0.002)EK 108.17 0.00010065 93328500.0 11647.9 12709.8 10959.8 10982.2 15058.900000000001 11570.1 11166.0 12075.6 16718.9 16734.1 16952.5 True False 13613.780756186292 13356.674532054953 12514.064441277498 13672.839493009695 12843.755758404199 12794.440302389197 13194.717664954902 13787.35327997402 12932.09584459715 12953.855187662808 12742.726384801914 1.0683569861802318 1.04818028173196 0.9820554929440266 1.0729916879732357 1.0079283954274323 1.004058308718687 1.0354705316981516 1.0819782881329085 1.0148609845394698 1.016568573826768 1.0 13.637386363660296 KESVS(ph)PEDSEK ddPTM_A549_PD325901_60min_R1 4 KESVSPEDSEK 11 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 KES(0.102)VS(0.834)PEDS(0.064)EK;KESVS(1)PEDSEK;KES(0.018)VS(0.979)PEDS(0.002)EK;KES(0.095)VS(0.905)PEDSEK 159.18 1.0847e-13 96812900.0 30792.5 29367.199999999997 29126.199999999997 26718.9 32045.7 28639.7 27791.0 30492.4 30440.899999999998 30327.700000000004 34811.7 True False 33918.5319317596 31842.077008197346 31102.879082068863 28369.265769975387 29794.920583663396 28406.46777866226 28848.601712818738 29884.205161174945 29161.57483408126 28412.803846242357 30530.081589548106 1.1109872678287083 1.0429738589070263 1.0187617412957342 0.9292233853606054 0.9759201100158085 0.9304419215305059 0.9449238328499908 0.9788445888531698 0.9551751359899624 0.9306494567629785 1.0 14.897943824602795 -5.598884208748525 1.6354450378899033 0.9698900344863826 1.1169923478450376 0.7620560640900047 0.026403916565465865 0.219259701805945 0.8683910256033602 0.0038862431843053975 0.04146433060752863 2.5183482782847213e-06 5.598884208748525 0.1471023133586551 KESYS(ph)VYVYK ddPTM_A549_MK2206_60min_R1 1 KESYSVYVYK 10 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 1 KES(0.286)YS(0.696)VY(0.018)VYK 75.462 0.00064511 14014000.0 2740.6 3889.4 3240.7 2921.5 4025.2 2647.4 2902.7 3207.0 5004.5 4143.4 4223.9 True False 3203.1462787630517 4087.3538470294175 3700.279990040691 3637.2676311511177 3433.098412150195 2927.5461107981073 3430.0830168426132 3661.6020710255957 3870.9887405443205 3207.403062283724 3174.9890562905052 1.0088684470948834 1.2873599796922994 1.1654465336532243 1.1456000529969432 1.0812945655193067 0.922064945388663 1.0803448314401898 1.1532644699265906 1.2192132545700758 1.0102091709352503 1.0 11.632535903802756 -11.10659785197637 1.4699676675538016 1.0004647957856956 1.1317827978093176 0.16399860338069916 0.09438476314065135 0.5629231003251639 2.1877120136756663 0.07123129408768301 0.01573030042541938 7.82351911540072e-12 11.10659785197637 0.13131800202362198 KESYS(ph)VYVYK ddPTM_A549_PD325901_60min_R1 2 KESYSVYVYK 10 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 1 KES(0.033)YS(0.79)VY(0.051)VY(0.126)K;KES(0.025)YS(0.975)VYVYK 86.291 0.00032353 49745000.0 10773.6 11962.5 11052.099999999999 11508.400000000001 14142.1 11970.2 11333.8 12091.5 12442.9 13236.2 14382.3 True False 11867.327940894866 12970.621857397404 11802.161967676298 12219.247730527248 13148.807683596428 11872.718659907165 11765.11396109333 11850.325546901748 11919.968184350331 12400.464073095973 12613.368276911422 0.9408532027577303 1.0283234083587276 0.9356867815617479 0.9687537430342372 1.0424501524834662 0.9412805841592682 0.932749579874647 0.9395052365666344 0.9450265720195969 0.9831207494190772 1.0 13.622665964296589 KESYSIYVYK ddPTM_A549_MK2206_60min_R1 2 KESYSIYVYK 10 1 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 100.93 0.00044292 10196700.0 6585.1 6903.4 6007.7 6906.1 8573.7 7402.2 6629.700000000001 5981.7 9488.7 8811.400000000001 8869.599999999999 False True 7696.503889762309 7254.753573194554 6859.682197107868 8598.094810026612 7312.520087511709 8185.495890817309 7834.230673773204 6829.624293187958 7339.524600340278 6820.898620216929 6667.0335314932345 1.1544120564875127 1.088153155211398 1.0288957097192648 1.2896432527917514 1.096817655553909 1.227756820503643 1.1750699372916682 1.024387272229349 1.1008681095828272 1.0230784933054375 1.0 12.702829267753833 -9.744166091612632 0.5238858798625597 1.0012384463274082 1.1445103925884017 0.3121249744485034 0.07360762704008775 0.7706210884683987 0.447055288638259 0.04749803883079284 0.020203147686772203 1.8023283264644153e-10 9.744166091612632 0.1432719462609935 KESYSIYVYK ddPTM_A549_PD325901_60min_R1 2 KESYSIYVYK 10 1 Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 113.77 0.00010174 16262000.0 8794.9 7138.5 8093.9 8652.7 8975.4 8754.3 9162.0 8369.6 9636.4 9295.0 9353.3 False True 9687.751773536822 7740.086447567926 8643.200726574596 9187.157627292512 8344.998867449061 8683.007883278915 9510.664923638771 8202.66176217582 9231.415619483678 8708.112113705372 8202.90339545383 1.1810149780510542 0.9435788859658638 1.0536757913502657 1.1199885192338326 1.017322582644821 1.0585286044074549 1.1594266645770475 0.9999705429570042 1.1253839249892745 1.0615890123162413 1.0 13.001918922788354 -5.195147688356694 22.008020201807636 1.0581765421173854 1.1810209188246474 0.26509996453303386 0.06044929107046279 29693.13154057634 9855729.020293962 0.00861483702873494 36.962997746855976 6.3804647201422686e-06 5.195147688356694 0.122844376707262 KET(ph)ES(ph)EAEDNLDDLEK ddPTM_A549_MK2206_60min_R1 2 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KET(1)ES(1)EAEDNLDDLEK;KET(1)ES(1)EAEDNLDDLEK 134.09 1.2324e-10 15899200.0 5469.4 5520.2 5653.299999999999 4849.700000000001 9221.4 6419.9 5751.9 6353.799999999999 9196.1 8348.8 9036.2 True False 6392.501006008411 5801.154601319432 6455.022948035008 6037.876717711309 7864.944275514711 7099.24955681528 6796.945776200441 7254.470607696418 7113.19803315409 6462.800281506578 6792.262153567149 0.9411446233198182 0.854082847534498 0.9503495009604378 0.8889345819110275 1.1579270790342233 1.0451966364529832 1.0006895526891335 1.068049266014641 1.0472502197840512 0.9514945294201367 1.0 12.7296764267616 -6.720245606616021 24.999975823519033 1.0342313732296173 0.9077117842595626 0.5724394312931261 0.053970248617504386 76.21280041638776 46252.21376967401 0.006791797543407682 0.014138140063615133 1.9043834271593088e-07 6.720245606616021 -0.12651958897005477 KET(ph)ES(ph)EAEDNLDDLEK ddPTM_A549_PD325901_60min_R1 2 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KET(1)ES(1)EAEDNLDDLEK;KET(1)ES(1)EAEDNLDDLEK 126.93 1.3946e-09 471270000.0 18610.6 19771.7 19314.6 20333.1 20772.6 18526.6 20198.6 21977.5 20347.0 23183.2 24911.3 True False 20499.934411600396 21437.930547787182 20625.404904125066 21589.02940717943 19313.60423757965 18375.72551207464 20967.268776098026 21539.141521484773 19491.886348598502 21719.408795530344 21847.36802574161 0.9383251285668094 0.9812591852038192 0.9440681769915366 0.9881752979005164 0.8840243005392431 0.8410956180361628 0.9597160056714105 0.9858918244113585 0.8921846478547087 0.9941430368152129 1.0 14.41517186683031 KET(ph)ESEAEDNLDDLEK ddPTM_A549_MK2206_60min_R1 2 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.902)ES(0.098)EAEDNLDDLEK;KET(0.86)ES(0.14)EAEDNLDDLEK 151.82 3.5146e-15 94756000.0 6316.6 6977.3 6065.700000000001 6022.5 9163.2 7248.799999999999 6797.6 7478.4 10552.9 8637.1 10685.8 True False 7382.687653957052 7332.414767542127 6925.907469247336 7498.012770360302 7815.3054184176435 8015.863204635983 8032.635930440398 8538.486101639477 8162.684999518465 6685.9731112735335 8032.220946923246 0.919134035622489 0.9128751332906024 0.8622655570624356 0.9334918473865472 0.9729943274794137 0.9979634845212358 1.000051664853332 1.0630292864279534 1.0162425876301615 0.832394073252505 1.0 12.971583239539203 -6.846622321611447 1.7622983480137977 1.011563971211143 0.898984321283454 0.23377645754110643 0.0583018372081348 0.10228450001976659 0.6427973465461597 0.0034209545548150575 0.00786734200609117 1.4235662343190643e-07 6.846622321611447 -0.1125796499276891 KET(ph)PPKEVK ddPTM_A549_MK2206_60min_R1 2 KETPPKEVK 9 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KET(1)PPKEVK;KET(1)PPKEVK 63.091 0.002378 362060000.0 10072.3 9549.8 10028.5 9443.6 12161.2 9086.7 9320.8 9604.599999999999 12320.1 14798.5 13707.300000000001 True False 11772.257995907874 10035.84402950623 11450.69209742435 11757.282423939321 10372.303589844221 10048.248562736706 11014.268709610578 10966.081462853885 9529.617021156982 11455.508571995382 10303.399107765536 1.1425606125492391 0.9740323484064931 1.111350921929649 1.141107153179965 1.0066875485806188 0.975236274712825 1.0689936975564958 1.0643168674878267 0.9249003092556743 1.111818386551824 1.0 13.330832742873437 -7.833605449215071 0.7378322515582074 0.9678841571869742 1.078169397295763 0.0 0.07421758440345654 0.5519130611405278 0.6078773235004007 0.013473973579590884 0.02402323919884879 1.4668798767362377e-08 7.833605449215071 0.11028524010878893 KET(ph)PPKEVK ddPTM_A549_PD325901_60min_R1 2 KETPPKEVK 9 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KET(1)PPKEVK;KET(1)PPKEVK 45.915 0.014537000000000001 426400000.0 12371.599999999999 11750.4 12582.900000000001 12007.400000000001 12832.900000000001 10083.0 12363.400000000001 11047.0 12294.4 13517.099999999999 14433.6 True False 13627.555724509433 12740.647446032386 13436.85126112449 12749.06982721602 11931.561375101612 10000.887391007996 12833.895952512077 10826.658918796153 11777.709122927672 12663.627999157286 12658.358702128915 1.0765657732718157 1.0065007435671445 1.0615002764034998 1.007166104802501 0.9425836047050027 0.790061936649498 1.013867299427503 0.8552972129771688 0.9304294024269408 1.0004162701620618 1.0 13.627802734884071 -6.602354619523163 3.768072091612922 0.946508277980835 1.0431205260097958 0.375270794611553 0.06483927269455794 0.21846698495462458 6.09391556226785 0.00948184366892209 0.02084879795263797 2.4983045589385255e-07 6.602354619523163 0.09661224802896073 KET(ph)PPPLVPPAAR ddPTM_A549_MK2206_60min_R1 2 KETPPPLVPPAAR 13 1 Q9BQA1-2;Q9BQA1 Q9BQA1-2 WDR77 Methylosome protein 50 1 KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR 122.14 4.8658999999999994e-06 692520000.0 17289.1 19422.0 17423.7 15877.6 22875.0 19334.8 17145.1 16799.300000000003 24580.0 25535.0 25514.0 True False 20207.077402087976 20410.49684193072 19894.642658213357 19767.612712772545 19510.11780232927 21380.795702598483 20260.142740230916 19180.65222069855 19012.6692461943 19766.625765172306 19178.169649422558 1.0536499453010313 1.0642567677226311 1.0373587793771744 1.0307351052850726 1.0173086461833811 1.1148506918772745 1.0564169110288861 1.0001294477690714 0.9913703754709854 1.0306836432520279 1.0 14.227177416709068 -8.278644335770604 7.000970126698302 0.9960607542719371 1.053425984947265 0.4321713702699258 0.025630459329244754 0.09292641689077438 23.261699187684453 0.0038704930033176634 0.00476394833507688 5.26448223174627e-09 8.278644335770604 0.05736523067532784 KET(ph)PPPLVPPAAR ddPTM_A549_PD325901_60min_R1 4 KETPPPLVPPAAR 13 1 Q9BQA1-2;Q9BQA1 Q9BQA1-2 WDR77 Methylosome protein 50 1 KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR 115.73 1.1088e-05 1053840000.0 42699.0 39456.3 42293.600000000006 40236.200000000004 48340.0 46697.0 44081.399999999994 46818.8 48176.8 46875.6 50837.200000000004 True False 47033.77104665755 42781.4208728969 45163.89802807742 42721.49869095969 44944.76516394676 46316.715114341016 45758.941799267646 45884.96230536191 46152.09663533492 43915.86661616007 44584.546683562556 1.0549343785073848 0.9595571572486027 1.012994442864403 0.958213144885698 1.0080794469649057 1.0388513186659152 1.0263408558135698 1.0291674070621153 1.0351590420532477 0.9850019767578121 1.0 15.444256128120031 -6.997024317019999 24.988478107482983 1.0203676114401625 0.9934963482993105 0.1182084678971802 0.028429654805267827 120.83995815362938 1014740.6038429888 0.0037072817024475183 0.006977410828235546 1.0068752903043804e-07 6.997024317019999 -0.026871263140851975 KET(ph)PSATK ddPTM_A549_PD325901_60min_R1 1 KETPSATK 8 1 P52701;P52701-2;P52701-3;A0A087WWJ1;A0A494C0M1;P52701-4 P52701 MSH6 DNA mismatch repair protein Msh6 1 KET(0.992)PS(0.007)AT(0.001)K 48.44 0.0219 6101700.0 2031.8 1909.1 1880.9 1556.8 1668.3 1569.9 1664.2 1446.7 1947.0 2033.0 2704.8 True False 2238.066840267896 2069.9865569870335 2008.5491847705266 1652.9600002506706 1551.1243633225567 1557.1152548986856 1727.532041685182 1417.8444335858062 1865.1743608748839 1904.6360330460484 2372.12674713989 0.9434853525286404 0.8726289855644722 0.8467292850992323 0.69682617180708 0.6538960724559812 0.6564216084895648 0.7282629580262076 0.5977102342003112 0.786287816670738 0.802923383138147 1.0 11.21196538248229 -10.193130616129888 0.9029143160046519 0.984367873229824 0.7496421868744055 0.1357053718449006 0.11307232219515523 0.38656416307700603 0.6214208103038199 0.04963850983530435 0.02103360699109302 6.41016758753852e-11 10.193130616129888 -0.23472568635541846 KET(ph)QSPEQVKSEK ddPTM_A549_PD325901_60min_R1 1 KETQSPEQVKSEK 13 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KET(0.5)QS(0.5)PEQVKSEK 154.74 4.8583e-18 45852000.0 7310.7 6654.5 7197.5 6986.3 8719.6 8997.8 9281.5 8498.7 7420.2 8128.6 7987.9 True False 8052.876882147113 7215.29806896978 7685.965632083507 7417.827883961499 8107.165376986967 8924.524900011083 9634.712561531687 8329.186761398832 7108.35479844058 7615.358808764446 7005.4389394701 1.1495178177595025 1.0299565996239421 1.0971426199690613 1.0588669672314055 1.1572672957449548 1.2739422864323966 1.3753188978991326 1.1889600114092012 1.0146908509030934 1.0870637621088852 1.0 12.774259733028018 -8.768778738976893 22.966318321083975 1.00693729491976 1.166180407631594 0.26998072599731604 0.09419290728931662 50.97736269389089 159517.6589248065 0.017626284294295587 0.01897143625920036 1.7030259320075557e-09 8.768778738976893 0.1592431127118341 KET(ph)SFGSSENITMTSLSK ddPTM_A549_MK2206_60min_R1 3 KETSFGSSENITMTSLSK 18 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 KET(0.34)S(0.34)FGS(0.286)S(0.033)ENITMTSLSK;KET(0.332)S(0.332)FGS(0.289)S(0.046)ENITMTSLSK;KET(0.348)S(0.348)FGS(0.273)S(0.031)ENITMTSLSK 110.18 1.6039e-09 10039400.0 5154.9 6602.5 6671.0 6512.6 9087.0 7139.0 6211.0 6285.2 8900.6 9464.3 9197.9 True False 6024.921094795176 6938.539048442368 7617.048111075223 8108.187292361726 7750.31433747611 7894.444241515326 7339.458303513782 7176.146347617727 6884.628311337548 7326.308056758179 6913.807580874184 0.8714331465431647 1.003577112506949 1.1017153749182185 1.1727528134846534 1.1209907488481416 1.141837424482842 1.0615653122625346 1.0379441810716943 0.9957795658621806 1.0596632855425574 1.0 12.755264736977825 -8.496062552018298 2.478826333921931 0.9979253260858433 1.0755136980356146 0.05071981849540219 0.07829995045536993 0.4019565510495584 4.9112960232163 0.013871459178271301 0.016430532900183162 3.1910782067139715e-09 8.496062552018298 0.0775883719497713 KET(ph)SPESSLIQDEIAVK ddPTM_A549_PD325901_60min_R1 1 KETSPESSLIQDEIAVK 17 1 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 KET(0.459)S(0.459)PES(0.041)S(0.041)LIQDEIAVK 46.953 0.015378 2412800.0 1891.8 1505.0 1607.4 1957.0 2510.4 1941.4 1510.6 1822.3 2033.8 1860.5 1984.3 True False 2083.8541433304467 1631.8316317979602 1716.4878300814214 2077.8794453305263 2334.078164409844 1925.5898820691177 1568.0867096320374 1785.9527969333055 1948.326458730014 1743.0277124850845 1740.2436795140798 1.1974496260847285 0.937702949884357 0.9863491247160906 1.1940163724144213 1.3412363980322444 1.106505890374382 0.9010730670028274 1.0262659292818055 1.1195710587347378 1.0015997949044597 1.0 10.765073619823406 -7.5427571034684915 24.992231712252586 1.042785673666993 1.126803746618801 0.18803956021844248 0.11311884424915301 451.1513437751078 567211.5194117804 0.018700023521585778 0.027738189789094564 2.865780323858748e-08 7.5427571034684915 0.08401807295180808 KET(ph)SPLLR ddPTM_A549_PD325901_60min_R1 1 KETSPLLR 8 1 Q9H4B6;G3V453 Q9H4B6 SAV1 Protein salvador homolog 1 1 KET(0.806)S(0.194)PLLR 63.401 0.006118800000000001 7889600.0 2573.1 2095.9 2224.2 2351.4 3104.1 2610.9 2309.8 2835.3 2519.3 2582.5 2959.3 True False 2834.319217783895 2272.528848561689 2375.14758720113 2496.640637583137 2886.0787245636566 2589.637696041137 2397.70070297106 2778.7477172501804 2413.4225821017435 2419.4405092677925 2595.324860548312 1.0920864901610394 0.8756240434893279 0.9151638869206281 0.9619761577961666 1.1120298535397675 0.9978086887720202 0.9238537877930626 1.0706743342577612 0.9299115570417886 0.9322303138408036 1.0 11.341699418762955 -5.217400485990268 22.954985848521947 0.9733016754164251 1.092087699371849 0.21068281374494446 0.06681329540697263 13318.68404067615 6941830.523065702 0.008920273442121601 5.072971417798701 6.061770837135814e-06 5.217400485990268 0.11878602395542381 KET(ph)SPQVKGEEMPAGK ddPTM_A549_MK2206_60min_R1 2 KETSPQVKGEEMPAGK 16 2 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 KET(0.5)S(0.5)PQVKGEEMPAGK;KET(0.5)S(0.5)PQVKGEEMPAGK 52.298 0.0061278999999999995 8311000.0 3177.0 3189.6 3135.8999999999996 2859.5 4128.9 3005.3 2572.2 2851.8 3886.1 4698.9 4695.1 True False 3713.1999298074224 3351.937016116891 3580.6177741749016 3560.077628367831 3521.5442795207564 3323.3188512433135 3039.5354449039064 3256.051383271217 3005.904554826512 3637.41522647222 3529.177091832089 1.0521432711328755 0.9497786392965653 1.0145758291534497 1.0087557341928968 0.9978372260408813 0.9416696200751125 0.8612589750564212 0.922609236812459 0.8517295892527932 1.030669510716999 1.0 11.785116110103521 -7.313756622639874 3.969303492282168 0.922181839931405 1.0028282830147648 0.2840013367629364 0.053954830272548 0.2265989285356571 7.459973406418688 0.008907682402188777 0.014776868679508084 4.855605306366714e-08 7.313756622639874 0.08064644308335978 KET(ph)SPQVKGEEMPAGK ddPTM_A549_PD325901_60min_R1 2 KETSPQVKGEEMPAGK 16 2 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 KET(0.5)S(0.5)PQVKGEEMPAGK;KET(0.5)S(0.5)PQVKGEEMPAGK 65.423 0.0014162 17944400.0 3346.0 3482.7 4020.8999999999996 3624.4 4162.0 3750.0 4115.0 3990.2 4029.1 4480.6 4982.1 True False 3685.6834568049903 3776.1993515367108 4293.782453635926 3848.270956390375 3869.675478120529 3719.4612433085354 4271.598576814401 3910.612330748657 3859.770938572673 4197.69415133602 4369.333284133998 0.8435345205156382 0.8642507005013589 0.9827088423827924 0.8807455751577217 0.8856443824443799 0.8512651705500952 0.977631665756766 0.8950135126905844 0.8833775515794007 0.9607173173487962 1.0 12.093197440576645 -10.84544653424339 0.715409370176729 1.0129260776654334 0.8961827595468994 0.33427574381925285 0.04459179917966205 0.7067015108678387 0.5221899598408503 0.051283325286034 0.0082229156154986 1.4274255489285284e-11 10.84544653424339 -0.116743318118534 KETERAS(ph)PIK ddPTM_A549_MK2206_60min_R1 4 KETERASPIK 10 2 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KETERAS(1)PIK;KET(0.006)ERAS(0.994)PIK;KETERAS(1)PIK;KET(0.002)ERAS(0.998)PIK 82.069 0.00022048 292091000.0 11938.6 13285.1 11648.4 11235.5 16067.3 12784.400000000001 11649.0 12294.2 15721.8 16969.4 16597.0 True False 13953.543809253664 13961.25484474997 13300.31827567809 13988.198004380765 13703.821454223607 14137.23672240209 13765.472512901635 14036.94049940844 12160.83740255564 13136.000754239863 12475.506846102784 1.1184751033672515 1.1190931973326053 1.0661144625024168 1.121252881901991 1.0984580925867982 1.1331993879525957 1.1033998604394837 1.1251599371927266 0.9747770212922898 1.052943252429332 1.0 13.606810809100358 -8.761995212911888 24.999999999455078 0.9880891429407629 1.109899228069819 0.7330893356308488 0.026419961597853318 2.9079421010254793 130790.79968363706 0.0031160850886764713 0.0034161598976198333 1.7298354265284402e-09 8.761995212911888 0.12181008512905611 KETERAS(ph)PIK ddPTM_A549_PD325901_60min_R1 8 KETERASPIK 10 2 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KET(0.015)ERAS(0.985)PIK;KET(0.006)ERAS(0.994)PIK;KETERAS(1)PIK;KET(0.169)ERAS(0.831)PIK;KET(0.089)ERAS(0.911)PIK;KET(0.004)ERAS(0.996)PIK;KET(0.001)ERAS(0.999)PIK;KET(0.012)ERAS(0.988)PIK 84.29700000000001 0.00018797 447430000.0 38407.299999999996 36880.3 37406.700000000004 33783.100000000006 42238.200000000004 36371.3 36854.4 37855.5 36495.2 38774.0 44247.09999999999 True False 42306.380822040126 39988.3323124241 39945.343606760434 35869.805360013124 39271.53454587949 36075.104191666076 38256.91435950151 37100.44235543475 34961.43365947667 36325.80302278776 38804.98720547667 1.0902305056312271 1.030494665561452 1.0293868516241342 0.9243607057535818 1.0120228706153775 0.9296512327305879 0.9858762266027031 0.9560740777721131 0.9009520728444528 0.9361117124053835 1.0 15.243954458617486 -5.517864946928018 0.8900805593385724 0.9544146421703509 1.1311016349470706 0.6109860612032361 0.034139507149955645 0.9460557351662624 0.7083414529778933 0.006336278446330863 0.14791298743307527 3.034834783655606e-06 5.517864946928018 0.17668699277671973 KETERAS(ph)PIKMDLAPSK ddPTM_A549_MK2206_60min_R1 2 KETERASPIKMDLAPSK 17 3 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KET(0.465)ERAS(0.535)PIKMDLAPSK;KET(0.12)ERAS(0.867)PIKMDLAPS(0.013)K 44.105 0.011304 39974200.0 3122.3 3349.8 3172.2 2578.8 3157.4 2972.8 2517.3 2955.7 4081.9 4126.5 4285.5 True False 3649.267907094025 3520.2905118473664 3622.0656600139105 3210.6061157667295 2692.9506425824898 3287.37972281507 2974.660825541018 3374.679526451619 3157.3561674548623 3194.320784021282 3221.292076216997 1.1328584371584312 1.092819411762719 1.12441392283421 0.9966827098575871 0.8359846232090268 1.0205158815265472 0.923437165944413 1.0476167471329567 0.9801520920024056 0.9916271820258568 1.0 11.653423761218274 -6.294094359569193 6.025537248402045 0.9808932754898156 1.1145426402444427 0.5792113551172947 0.05382362659091234 0.10027814887648404 11.583386273899006 0.007206928588408344 0.017324738736644914 5.080490462755102e-07 6.294094359569193 0.13364936475462708 KETERAS(ph)PIKMDLAPSK ddPTM_A549_PD325901_60min_R1 4 KETERASPIKMDLAPSK 17 3 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KET(0.197)ERAS(0.803)PIKMDLAPSK;KET(0.201)ERAS(0.799)PIKMDLAPSK;KET(0.041)ERAS(0.959)PIKMDLAPSK;KET(0.083)ERAS(0.917)PIKMDLAPSK 67.563 0.00052072 86761000.0 8298.8 8670.2 8278.44 8103.3 9817.3 9780.0 9332.0 9767.6 9423.5 9158.5 10391.7 True False 9141.288066746334 9400.868182069542 8840.264720703775 8603.822437070437 9127.766715846383 9700.35492254867 9687.134366666336 9572.777555466031 9027.463066103986 8580.23074700061 9113.586778413774 1.0030395593969845 1.031522320535337 0.9700093866053503 0.9440654537299462 1.0015559118245514 1.0643838873103948 1.062933244857124 1.0503852970533936 0.9905499651889224 0.941476825274056 1.0 13.153803243082775 -4.876690457209331 13.804204698402462 1.0050356916382102 0.9026503930852936 0.0001123520347070528 0.041411140368820036 9976403.83632456 9929691.939190641 0.0053888238130610795 31551751.087102257 1.3283408935369663e-05 4.876690457209331 -0.10238529855291656 KETES(ph)EAEDNLDDLEK ddPTM_A549_MK2206_60min_R1 5 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.147)ES(0.853)EAEDNLDDLEK;KET(0.011)ES(0.989)EAEDNLDDLEK;KET(0.001)ES(0.999)EAEDNLDDLEK;KET(0.046)ES(0.954)EAEDNLDDLEK;KET(0.005)ES(0.995)EAEDNLDDLEK 278.97 2.829599999999999e-107 2356192400.0 59344.7 64688.100000000006 59840.100000000006 54304.1 83549.7 64227.0 62120.2 65982.29999999999 89589.5 94865.0 96499.7 True False 69360.63452138574 67980.44798478522 68326.32598884015 67608.60693780359 71259.6498076185 71023.45850956796 73406.6362431068 75335.49308731892 69297.6212950336 73434.93061339608 72536.16123376903 0.956221467218961 0.9371939020276839 0.9419622547799097 0.932067616866504 0.982401723437823 0.9791455365369289 1.0120005662628382 1.0385922249804234 0.9553527525629832 1.0123906388805233 1.0 16.146412776421638 -6.793921692841831 8.571107522118483 0.985851703788437 0.9415429013584427 0.5479130843451462 0.022724896858121662 0.19000121583587895 45.19412045582581 0.003687063946583506 0.0070388146704960875 1.6072310249381002e-07 6.793921692841831 -0.044308802429994354 KETES(ph)EAEDNLDDLEK ddPTM_A549_PD325901_60min_R1 7 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.113)ES(0.887)EAEDNLDDLEK;KET(0.003)ES(0.997)EAEDNLDDLEK;KET(0.15)ES(0.85)EAEDNLDDLEK;KET(0.158)ES(0.842)EAEDNLDDLEK;KET(0.196)ES(0.804)EAEDNLDDLEK;KET(0.002)ES(0.998)EAEDNLDDLEK;KET(0.156)ES(0.844)EAEDNLDDLEK 278.28 3.034699999999999e-107 3115340100.0 54960.5 55842.4 57359.3 60383.4 60717.2 58881.3 57186.2 57296.1 64017.799999999996 63688.9 66034.9 True False 60540.04950021833 60548.43502691988 61252.04702749111 64113.14547734868 56452.63333496872 58401.790214832785 59362.45213448936 56153.284337579076 61327.354493896346 59667.5719847843 57913.025929720454 1.0453615318544374 1.045506327029045 1.057655787176838 1.1070591537584704 0.974783003110147 1.0084396260990656 1.0250276372456835 0.9696140623997632 1.0589561417205051 1.0302962248457377 1.0 15.821600258517545 -6.761856503350213 24.999999943758404 1.0191900955390916 1.062136458323189 0.4254912814173357 0.028996017674675013 11.453082637599161 686488.5135329296 0.00471308071260568 0.009312629682898789 1.7303880078894812e-07 6.761856503350213 0.04294636278409736 KETES(ph)EAEDNLDDLEKHLR ddPTM_A549_PD325901_60min_R1 4 KETESEAEDNLDDLEKHLR 19 2 A9Z1X7;Q8IYB3;Q8IYB3-2 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.175)ES(0.825)EAEDNLDDLEKHLR;KET(0.031)ES(0.969)EAEDNLDDLEKHLR;KET(0.159)ES(0.841)EAEDNLDDLEKHLR;KET(0.156)ES(0.844)EAEDNLDDLEKHLR 138.93 5.5861e-18 21517100.0 1482.51 2022.05 2960.9 3409.5599999999995 2123.15 7405.220000000001 4099.820000000001 4238.48 3624.98 2967.51 3577.27 True False 1633.0133238338199 2192.455249885091 3161.8444793381104 3620.1607775274138 1974.0272684698712 7344.914343512866 4255.84089360759 4153.940191376763 3472.634696807515 2780.140912161576 3137.288468182899 0.5205174278346334 0.6988376338739897 1.0078271448112752 1.1539139018428202 0.6292144597124718 2.341166398309239 1.3565347709554265 1.3240542696358117 1.1068904667280552 0.8861604345142731 1.0 11.615302473226201 -5.672821885072985 1.3249286093833184 1.1656800531330258 0.43895913131596576 0.24776782280201393 0.4086125892206716 0.8396041922258963 2.0487195050237803 0.059266893375678927 0.6688832578637797 2.1241154357508836e-06 5.672821885072985 -0.72672092181706 KETKPEPMEEDLPENKK ddPTM_A549_PD325901_60min_R1 2 KETKPEPMEEDLPENKK 17 3 P31948;P31948-2;P31948-3;F5H783 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 50.653 0.0035274 5871600.0 1759.57 1460.66 1568.6599999999999 1386.27 1831.73 1593.1 1572.4099999999999 1833.25 1919.04 1868.18 1897.06 False True 1938.2002510730279 1583.7549443867167 1675.1187007188773 1471.896749452401 1703.0756039254488 1580.1263217906212 1632.2489230057672 1796.6843905931964 1838.3894224413634 1750.222795974406 1663.7336464541556 1.1649702794698125 0.9519281813901558 1.0068430750853576 0.8846949465675541 1.0236467883877574 0.9497471696616083 0.9810758630051809 1.0799110749622651 1.1049782075150336 1.0519849734989617 1.0 10.700208770005599 -8.250499329172728 24.17883892462222 1.0532335239488002 0.988676115107058 0.16241413529272397 0.06914603268207606 672.9175693230396 1487228.1667026656 0.01139381623437691 0.014631177720141443 5.616951459700055e-09 8.250499329172728 -0.06455740884174221 KETQS(ph)PEQVK ddPTM_A549_MK2206_60min_R1 6 KETQSPEQVK 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KET(0.002)QS(0.998)PEQVK;KETQS(1)PEQVK;KETQS(1)PEQVK;KETQS(1)PEQVK;KET(0.012)QS(0.988)PEQVK;KET(0.147)QS(0.853)PEQVK 174.72 4.6926e-11 1476325300.0 18821.6 20516.600000000002 20917.58 17727.140000000003 26503.199999999997 20176.709999999995 20456.41 22861.77 26731.75 26862.099999999995 27091.18 True False 21998.225936060247 21560.80730651613 23884.00737929318 22070.290095801553 22604.614388576752 22311.79605998386 24173.07490494002 26102.49590873425 20677.05130683299 20793.93295346131 20363.692327468987 1.080267054830052 1.0587867347333828 1.1728721390607326 1.0838059100917814 1.1100449773583025 1.0956655453828006 1.1870673803263312 1.281815472802252 1.015388121875192 1.0211278298195443 1.0 14.313711552925971 -8.954753203864492 24.999992870856435 1.0067886584992982 1.1317632677920906 0.4488651836491587 0.05997569076545031 80.32859501973418 44383.72245987562 0.010554249578082264 0.011231256543735812 1.1098053041660448e-09 8.954753203864492 0.12497460929279236 KETQS(ph)PEQVK ddPTM_A549_PD325901_60min_R1 4 KETQSPEQVK 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KET(0.004)QS(0.996)PEQVK;KETQS(1)PEQVK;KET(0.001)QS(0.999)PEQVK;KETQS(1)PEQVK 164.68 3.125e-09 2661146000.0 26302.7 25344.299999999996 25924.5 24340.0 27990.2 23558.9 25809.600000000002 25730.699999999997 27094.6 25146.9 28098.600000000002 True False 28972.930740975677 27480.153106828566 27683.89246668271 25843.426519849265 26024.264912947918 23367.0441293284 26791.79845155504 25217.481003156347 25955.90818600958 23559.12044240319 24642.650331701007 1.1757229985812068 1.115146006494168 1.1234137600479346 1.048727558602069 1.0560659897636726 0.9482358356263477 1.0872125396791963 1.0233266577952398 1.0532920703183928 0.9560303021504171 1.0 14.588869806636568 -6.131460755609809 1.246565392413966 1.0256338122512547 1.1603137344235277 0.6289400808134444 0.04071642521502241 0.24787714706337913 0.6602995872711489 0.005236765325049683 0.028213098098013326 7.388210224660864e-07 6.131460755609809 0.13467992217227298 KETQS(ph)PEQVKSEK ddPTM_A549_MK2206_60min_R1 3 KETQSPEQVKSEK 13 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KET(0.046)QS(0.954)PEQVKSEK;KET(0.007)QS(0.993)PEQVKSEK;KET(0.027)QS(0.973)PEQVKSEK 154.74 5.3362e-19 251037000.0 13527.2 16073.3 16333.2 15047.4 18327.4 12623.8 13506.8 10215.5 22147.1 26870.5 27480.3 True False 15810.260651712617 16891.362315384886 18649.493360487744 18734.013675503455 15631.463738159973 13959.64213699974 15960.81072514893 11663.578408656667 17130.81721165133 20800.435387627254 20656.183092303316 0.7654008768736982 0.8177387971390883 0.9028528299323952 0.9069445982246314 0.7567450224617926 0.6758093726522608 0.7726892550200174 0.5646531286316214 0.8293312048552877 1.0069834922879672 1.0 14.334286073126098 -9.98487469227648 1.033768662148232 0.9775640789297984 0.7788650043400227 0.4586261184310817 0.0933477616262892 0.3415925391992953 0.7382118231498099 0.03518484086879575 0.019168367813432903 1.0354408810967367e-10 9.98487469227648 -0.19869907458977565 KETQS(ph)PEQVKSEK ddPTM_A549_PD325901_60min_R1 1 KETQSPEQVKSEK 13 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 KETQS(1)PEQVKSEK 141.13 5.627699999999999e-13 310840000.0 6253.5 5830.3 5790.4 7004.8 7324.4 8589.3 8149.3 9001.2 7794.0 7758.4 7553.7 True False 6888.350716416614 6321.639842439626 6183.3713645038315 7437.470586944955 6809.959411808267 8519.351588573341 8459.426070968068 8821.664004695207 7466.445284365093 7268.533299943175 6624.6427868495175 1.0398071168592786 0.954261240317534 0.9333894012788663 1.1226976044216257 1.027973829068432 1.2860092027127836 1.276963353821998 1.3316437260899507 1.1270713794842835 1.0971962615662592 1.0 12.693626948503052 -6.269579763687394 23.999766462973874 1.113316755290917 0.9736634500846016 0.3007717829132007 0.109255394960898 445.46270325062716 1313332.8229156137 0.018609617006128152 0.04398449896087619 5.375516958715701e-07 6.269579763687394 -0.13965330520631525 KETS(ph)PLLR ddPTM_A549_PD325901_60min_R1 1 KETSPLLR 8 1 Q9H4B6;G3V453 Q9H4B6 SAV1 Protein salvador homolog 1 1 KET(0.186)S(0.814)PLLR 68.355 0.0031690999999999998 9472800.0 2340.1 1996.0 2113.4 2399.7 2604.5 2871.0 2343.7 2458.9 2234.4 2735.3 2438.4 True False 2577.66522930943 2164.2099249626085 2256.8280329066033 2547.924018885877 2421.5689050372216 2847.6195278770156 2432.89078602185 2409.8553105302676 2140.495938335305 2562.592691190782 2138.4922582911513 1.205365705354116 1.0120260742454161 1.0553360780973848 1.191458144871611 1.1323720699238229 1.3316015135600823 1.1376663986457214 1.1268945684451344 1.000936959222735 1.1983174974121837 1.0 11.062378269082235 -8.717427523263346 4.003179440605077 0.9998890000806833 1.1496354936394793 0.01916903145377835 0.09802332993001311 0.1550062441895726 5.193978237506416 0.013803481861184328 0.015348313737818038 1.916780915830858e-09 8.717427523263346 0.149746493558796 KETS(ph)PQVK ddPTM_A549_MK2206_60min_R1 2 KETSPQVK 8 1 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 KET(0.145)S(0.855)PQVK;KET(0.018)S(0.982)PQVK 81.017 0.0015897 30782000.0 10846.0 10468.4 10493.3 8861.8 13152.6 10569.8 10360.0 10912.4 13343.7 14624.900000000001 15084.599999999999 True False 12676.539640758981 11001.196845848399 11981.407726569569 11032.941397821322 11217.869963143861 11688.289220334598 12242.277897987897 12459.266117823408 10321.373255510289 11321.124932565828 11338.677506219321 1.1179910208933834 0.9702363295731965 1.0566847606343603 0.9730359992838404 0.989345534961269 1.030833553024461 1.0796918680571828 1.0988288635062986 0.9102801671402123 0.9984519734648185 1.0 13.468964759998688 -8.768959869123996 24.993071522775157 0.9576323041887671 1.0349923956396287 0.2564629261978234 0.051582990673739594 156.8235365674328 521175.27771447087 0.009469890883984703 0.010177167864529614 1.702315803205329e-09 8.768959869123996 0.07736009145086165 KETS(ph)PQVK ddPTM_A549_PD325901_60min_R1 2 KETSPQVK 8 1 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 KET(0.117)S(0.883)PQVK;KET(0.196)S(0.804)PQVK 90.10799999999999 0.0011057 31213000.0 8925.2 9961.7 9036.5 9549.3 11082.5 9044.0 8490.3 9329.599999999999 9227.099999999999 9240.1 9550.4 True False 9831.279733615023 10801.207419589196 9649.771230888866 10139.138572966167 10304.10343254944 8970.348662528648 8813.403012570427 9143.513809070382 8839.31707510459 8656.678509074665 8375.761344973678 1.1737774428726777 1.2895791767122204 1.152106755844915 1.2105333659071718 1.230228872117156 1.0709890472120225 1.0522509715322033 1.0916636031609752 1.0553449066942544 1.0335392989999133 1.0 13.032004620038716 -7.510338457754991 0.615545964838333 1.0197642014940074 1.2335746083605057 0.7464414492189435 0.04471280673566649 0.2618706527921937 0.19619836755055733 0.009702840929937872 0.023564003055774788 3.0878880176352534e-08 7.510338457754991 0.21381040686649833 KETS(ph)PQVKGEEMPAGK ddPTM_A549_PD325901_60min_R1 1 KETSPQVKGEEMPAGK 16 2 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 KET(0.205)S(0.795)PQVKGEEMPAGK 62.617 0.0013865 13482000.0 1861.4 1601.0 1976.3 1726.9 1797.2 1643.0 1859.1 2259.7 2174.9 2221.6 2440.7 True False 2050.3679577097446 1735.9218887099885 2110.423602457331 1833.566690925542 1670.9708720034157 1629.619952734913 1929.8490678385547 2214.6285107996437 2083.496516418482 2081.3277968593707 2140.5093728720512 0.9578878671101737 0.8109854181020458 0.9859445743167421 0.8566029722473648 0.7806416982708059 0.7613234370230079 0.9015840305567825 1.0346268691307539 0.9733648181240749 0.9723516389310302 1.0 11.063738437490272 -8.068695242075203 5.664103517700524 0.9901286892182279 0.856693973909062 0.4876018544857086 0.06514336880614048 0.14226657887904975 8.639125370324619 0.01035753937106534 0.013505782713289354 8.536989709539676e-09 8.068695242075203 -0.13343471530916595 KETSFGS(ph)SENITMTSLSK ddPTM_A549_PD325901_60min_R1 5 KETSFGSSENITMTSLSK 18 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 KET(0.004)S(0.004)FGS(0.834)S(0.157)ENITMTSLSK;KET(0.296)S(0.296)FGS(0.354)S(0.055)ENITMTSLSK;KET(0.026)S(0.059)FGS(0.742)S(0.173)ENITMTSLSK;KET(0.042)S(0.032)FGS(0.806)S(0.12)ENITMTSLSK;KET(0.031)S(0.031)FGS(0.815)S(0.118)ENIT(0.005)MTSLSK 113.54 2.9341e-10 47133200.0 15484.7 15433.8 15462.4 16527.9 19182.5 20166.7 17272.4 19001.8 17998.4 18295.5 17688.1 True False 17056.695344766344 16734.4604909258 16511.771446964645 17548.790845415646 17835.18737603245 20002.469081448064 17929.710633819945 18622.794192376263 17241.989839121994 17140.31900767044 15512.575834104216 1.0995398525154925 1.0787673607458077 1.0644119728113566 1.131262211581576 1.1497244278943022 1.289435700128722 1.1558177588019705 1.200496577198628 1.111484644685229 1.1049305538276661 1.0 13.921150642618613 -9.999396922460704 0.9004761597302025 1.0115852323033125 1.1440439983299329 0.17443742023533904 0.06540311600819053 0.3854930940702104 0.633028959969806 0.02598773807898435 0.012872442199739619 1.0013896019551926e-10 9.999396922460704 0.13245876602662032 KETSFGSS(ph)ENITMTSLSK ddPTM_A549_MK2206_60min_R1 1 KETSFGSSENITMTSLSK 18 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 KET(0.007)S(0.007)FGS(0.4)S(0.587)ENITMTSLSK 127.28 9.0004e-13 5896700.0 3124.8 3301.6 3201.0 3108.5 4159.7 3330.0 3362.0 3330.2 4601.7 4518.6 4649.6 True False 3652.1898459748913 3469.6373377262134 3654.949933076267 3870.082639545866 3547.813640321272 3682.378389724899 3972.831881567115 3802.2660483097684 3559.4222974048935 3497.8451216960066 3494.975997568207 1.044982812046799 0.9927499760056653 1.0457725419629118 1.1073273871519167 1.0151181704222947 1.0536205090641786 1.1367265138105094 1.0879233651262192 1.0184396974060848 1.0008209281350704 1.0 11.771066832306225 -8.910421944852196 6.098063456974883 1.0080084953694455 1.0600661522046246 0.2875167589218398 0.038187555088295785 0.21420329703520954 11.73280546465098 0.007038962796529935 0.007443369821270328 1.229074066514252e-09 8.910421944852196 0.052057656835179156 KETTSGTSTEPVKNS(ph)SPAPPQPAPGK ddPTM_A549_MK2206_60min_R1 5 KETTSGTSTEPVKNSSPAPPQPAPGK 26 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 KETTSGTSTEPVKNS(0.5)S(0.5)PAPPQPAPGK;KET(0.015)T(0.015)S(0.004)GT(0.004)S(0.004)T(0.004)EPVKNS(0.478)S(0.478)PAPPQPAPGK;KETT(0.002)S(0.002)GT(0.002)S(0.002)T(0.002)EPVKNS(0.496)S(0.496)PAPPQPAPGK;KET(0.003)T(0.003)S(0.002)GT(0.002)S(0.003)T(0.003)EPVKNS(0.492)S(0.492)PAPPQPAPGK;KETTSGTSTEPVKNS(0.499)S(0.499)PAPPQPAPGK 181.97 9.539199999999999e-58 177522600.0 3526.2600000000007 3961.2799999999997 4721.4400000000005 4068.9399999999996 4954.490000000001 3501.12 4062.3800000000006 3364.57 5310.639999999999 5543.8 5819.11 True False 4121.406479220244 4162.892232005118 5391.011187761202 5065.830482661654 4225.69108417322 3871.606194544635 4800.461861701549 3841.508101063478 4107.788519349445 4291.451729663687 4374.064387734238 0.9422372681064097 0.951721754183297 1.2324947028394662 1.1581517859835964 0.9660788478612506 0.8851278470891746 1.0974831269432193 0.8782468113262906 0.9391239257630764 0.9811130676763209 1.0 12.094758742172276 -6.799880613120711 23.445728175076393 0.9662671921980879 1.0741451808579507 0.22935213638063012 0.09446633711580875 94.99203076260783 57936.33900404516 0.013688716088372877 0.0258698630167226 1.585328937030849e-07 6.799880613120711 0.10787798865986287 KETTSGTSTEPVKNS(ph)SPAPPQPAPGK ddPTM_A549_PD325901_60min_R1 2 KETTSGTSTEPVKNSSPAPPQPAPGK 26 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 KETTSGTSTEPVKNS(0.5)S(0.5)PAPPQPAPGK;KETTSGTSTEPVKNS(0.5)S(0.5)PAPPQPAPGK 191.54 2.1495e-58 474380000.0 4329.6 3739.1 4051.8 4023.2 5654.5 4607.8 4175.9 4671.3 4174.9 4641.0 5180.9 True False 4769.137804716938 4054.207079372594 4326.779513452721 4271.70392664986 5257.347426966007 4570.275604511223 4334.816159640161 4578.127256936041 3999.443471605832 4347.966467961984 4543.682144431031 1.0496195933428656 0.892273480076426 0.952262807105872 0.940141451550584 1.1570676072510224 1.005852843406484 0.9540315589533772 1.0075808807504785 0.8802207866823948 0.9569257553130281 1.0 12.149646198577658 -7.833474192921285 5.2194319096798525 0.9482491226940851 0.996905606587258 0.06123055306868064 0.07109286285137462 0.43829459184367786 21.90831762523905 0.012308554795731829 0.017227876579810415 1.4673232770605554e-08 7.833474192921285 0.0486564838931729 KETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_A549_MK2206_60min_R1 1 KETTSGTSTEPVKNSSPAPPQPAPGK 26 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 KETTSGTSTEPVKNS(0.09)S(0.91)PAPPQPAPGK 160.99 2.1244999999999997e-41 141440000.0 1376.7 2091.9 1705.0 1639.9 2335.4 1833.1 1753.2 1568.5 2276.0 2056.2 2544.4 True False 1609.0533029165492 2198.368774772676 1946.794637892857 2041.6755736179093 1991.8657536856724 2027.0774252867 2071.7337462116193 1790.8396783297912 1760.4896340251519 1591.7029919070799 1912.555258132428 0.8413107522382165 1.149440658211015 1.0179024264082508 1.0675119398179191 1.0414683420079007 1.0598791416181619 1.0832281772787187 0.9363597055378732 0.9204908598270959 0.8322389563067297 1.0 10.901285715856634 -8.268693795246545 24.884885080954902 0.9594478641660439 1.0430164164216797 0.2709975635086612 0.08258497966828346 570.4275175263888 1956740.4180304683 0.011299758114248307 0.013789965328460647 5.386494301771429e-09 8.268693795246545 0.08356855225563586 KETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_A549_PD325901_60min_R1 2 KETTSGTSTEPVKNSSPAPPQPAPGK 26 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 KET(0.01)T(0.01)S(0.01)GT(0.01)S(0.01)T(0.01)EPVKNS(0.358)S(0.584)PAPPQPAPGK;KETTSGTSTEPVKNS(0.135)S(0.865)PAPPQPAPGK 122.09 8.0028e-18 11027600.0 1736.41 1717.77 1432.3000000000002 1600.0900000000001 2044.27 1578.45 1952.0 1711.6000000000001 1567.27 1308.49 1858.98 True False 1912.6890649225202 1862.5325064143387 1529.5044911195835 1698.9239252319485 1900.687527548642 1565.595626533429 2026.2844281753862 1677.460795275776 1501.4030922282382 1225.8717180917004 1630.3372450451468 1.1731861433795279 1.1424216137335206 0.9381522110029626 1.0420690138774953 1.1658247600765623 0.9602894317059382 1.242862134404146 1.028904173276937 0.920915655206455 0.7519129688150833 1.0 10.670954710117634 -8.52426476698487 23.239592714603816 0.9632996019445539 1.0898192536808498 0.3571098779570494 0.10821047914510719 16.930707543204942 283870.1794651688 0.014422986221928625 0.016430060378651964 2.9904409628800047e-09 8.52426476698487 0.12651965173629587 KETVNS(ph)PAIYK ddPTM_A549_PD325901_60min_R1 2 KETVNSPAIYK 11 1 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 1 KET(0.008)VNS(0.992)PAIYK;KET(0.001)VNS(0.999)PAIYK 102.65 9.479100000000001e-05 20193800.0 6898.5 7308.4 7482.9 7351.0 8242.6 8286.099999999999 7755.900000000001 7963.6 7786.9 7818.5 8060.5 True False 7598.83064159271 7924.304516832032 7990.734592333123 7805.054574667708 7663.668211426302 8218.620748847694 8051.055018691332 7804.759750676656 7459.643672674185 7324.838575686443 7069.10959971942 1.0749346200396037 1.1209763273647018 1.1303735611413188 1.1041071671851712 1.0841065771183518 1.162610457924418 1.1389065207039493 1.1040654612267484 1.0552451574623014 1.0361755568165436 1.0 12.787312794326725 -9.13085653560492 1.1098170426945833 1.014675777480691 1.1178384130825316 0.6863537880145834 0.025650519099602278 0.1549109241361848 0.39562617811001 0.006302575188430446 0.0056310012284205005 7.398496358672719e-10 9.13085653560492 0.10316263560184069 KEVLAS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 KEVLASPDR 9 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KEVLAS(1)PDR;KEVLAS(1)PDR 47.606 0.014247 12912100.0 6314.9 6622.4 5441.4 4982.9 8133.700000000001 6702.700000000001 5686.2 5745.2 8647.5 8764.5 9544.3 True False 7380.700735518059 6959.45187344259 6213.072341718591 6203.710723690877 6937.2435046472365 7411.97526510783 6719.308936635018 6559.599693937085 6688.855057219907 6784.593362790388 7174.186900720542 1.0287856781061524 0.9700683812326683 0.8660315695280504 0.8647266665254852 0.9669727873900932 1.033144991575757 0.9365951890604023 0.9143335383802546 0.9323502648848067 0.9456950950230993 1.0 12.808599615297686 KEVLAS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 KEVLASPDR 9 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KEVLAS(1)PDR;KEVLAS(1)PDR 58.751999999999995 0.0095243 17378000.0 4152.0 4229.7 3880.9 4807.7 5015.4 4183.4 4171.3 4664.8 4904.6 5155.1 5898.0 True False 4573.507983459152 4586.151663133441 4144.281211747532 5104.660709921086 4663.135606190698 4149.331777401847 4330.041104122945 4571.756904535197 4698.476718205932 4829.606106225132 5172.583390502464 0.8841825521569565 0.8866269167461296 0.8012014304799748 0.9868687123138329 0.9015099910719316 0.8021778411577781 0.8371138321469045 0.8838440213316884 0.9083423820354345 0.9336932324944084 1.0 12.336669283538011 -9.910595113318516 0.6982884785083455 0.9949109888500829 0.8724797500026333 0.2971800009184543 0.05194077468374106 0.42770329300100607 0.42703892927104936 0.024833970786678143 0.011021074595617112 1.228584089199711e-10 9.910595113318516 -0.12243123884744955 KEVLAS(ph)PDRLWGSR ddPTM_A549_MK2206_60min_R1 4 KEVLASPDRLWGSR 14 2 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KEVLAS(1)PDRLWGSR;KEVLAS(0.999)PDRLWGS(0.001)R;KEVLAS(1)PDRLWGSR;KEVLAS(0.99)PDRLWGS(0.01)R 114.4 8.875200000000001e-07 108905000.0 15146.599999999999 15229.3 13058.48 12741.779999999999 23315.5 16864.2 17466.300000000003 17496.1 24283.5 24560.199999999997 25206.9 True False 17702.97578118386 16004.406320400354 14910.368822892153 15863.51667200023 19885.820835856095 18648.758450450034 20639.70062255077 19976.225754559044 18783.326022781097 19012.03376220029 18947.331054951395 0.9343255643679507 0.8446786660339698 0.7869376842389479 0.8372428088152664 1.0495315027843697 0.9842419703526879 1.0893196811039576 1.0543028829033296 0.991344161787502 1.0034148718392708 1.0 14.209707022406787 -6.754720203113473 24.976963399780182 1.0096970699162928 0.8457978587954548 0.7704866413013696 0.04513680406432538 60.50323005384087 224904.44158254974 0.006652880023874769 0.013604465503549388 1.7590565319461037e-07 6.754720203113473 -0.16389921112083805 KEVLAS(ph)PDRLWGSR ddPTM_A549_PD325901_60min_R1 4 KEVLASPDRLWGSR 14 2 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KEVLAS(1)PDRLWGSR;KEVLAS(1)PDRLWGSR;KEVLAS(1)PDRLWGSR;KEVLAS(0.999)PDRLWGS(0.001)R 126.22 6.485e-08 133264000.0 28814.800000000003 27427.199999999997 24666.0 26400.1 23578.7 27998.9 23816.699999999997 26395.1 36496.8 30603.9 38086.3 True False 31740.057283665392 29738.586399766766 26339.983088707446 28030.774218022692 21922.61345409912 27770.886241405697 24723.05755149832 25868.629023944617 34962.966417040814 28671.564531105756 33401.92654894779 0.9502463050193507 0.8903254833575932 0.7885767621849104 0.8391963312938218 0.6563278145640289 0.8314157029448507 0.7401686101928493 0.7744651790080509 1.0467350248736536 0.8583805634411513 1.0 15.027643696094765 -8.762423901754511 24.999933954419472 1.0220693281469044 0.8052725653014849 0.35328695006602007 0.08822804532361256 11.869177751759715 301392.334173216 0.012822136599818191 0.014037811474955867 1.7281287613427918e-09 8.762423901754511 -0.2167967628454195 KEVQDEEK ddPTM_A549_MK2206_60min_R1 1 KEVQDEEK 8 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 72.848 0.0055184 7231700.0 5992.6 6490.9 5261.1 4595.6 2330.1 1983.6 1410.1 1617.9 2436.1 9161.4 9021.0 False True 7004.004374996528 6821.259085124506 6007.203090567806 5721.5222063043275 1987.3453766648063 2193.5032353928864 1666.296917369954 1847.2422796109481 1884.327239652316 7091.833377131371 6780.836733065809 1.0329115197306658 1.0059612631375687 0.8859088232097543 0.8437781989948406 0.2930826172194638 0.32348562894850014 0.24573618020391028 0.27242099350410953 0.27789007667205073 1.0458640513417805 1.0 12.727247592855905 -6.58052056559147 6.694358222722415 0.5432830185960715 0.9603255337701639 0.3822800937350964 0.27263922267881013 0.22367579505795804 20.236192092629683 0.047701068372105034 0.10017944715927893 2.627117118955272e-07 6.58052056559147 0.4170425151740924 KEVQDEEK ddPTM_A549_PD325901_60min_R1 2 KEVQDEEK 8 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 87.29799999999999 0.0027416999999999997 55707000.0 10521.7 11300.7 10265.6 11276.0 12674.3 10780.5 9649.8 10889.1 11229.5 12294.900000000001 13431.900000000001 False True 11589.85523833384 12253.049648810105 10962.285348067586 11972.49291034594 11784.100891961314 10692.707182263382 10017.028419573178 10671.908358166307 10757.563166638169 11518.597915739234 11779.86145182944 0.9838702505736099 1.040169249775614 0.9305954397591932 1.016352608161328 1.0003598887940415 0.9077107762250277 0.8503519723500237 0.905945150696907 0.9132164423688951 0.9778211707193185 1.0 13.524034950641928 -7.240534600560505 24.149709049055833 0.9413795158763361 0.9945088738164066 0.32960410229284653 0.045753358473101115 726.691364952249 839491.1369824138 0.008061664563725597 0.01395218574978988 5.7473202769846275e-08 7.240534600560505 0.053129357940070565 KEVS(ph)PEVVR ddPTM_A549_MK2206_60min_R1 4 KEVSPEVVR 9 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR 103.4 0.00027294 412658000.0 30362.699999999997 32988.8 29847.8 29317.1 42887.0 32997.0 30696.6 30291.199999999997 45259.0 45488.6 46841.4 True False 35487.18146325584 34667.78901344272 34080.66685800493 36499.79081609463 36578.37911206535 36488.720638364095 36273.774876773685 34585.07036290941 35007.908763771695 35212.693666795254 35209.38762312698 1.0078897663061424 0.9846177782050229 0.9679426186787565 1.036649407447236 1.038881434224069 1.036334997612875 1.030230212040029 0.9822684430953439 0.9942776948718373 1.0000938966534625 1.0 15.103672514993587 -6.2380603150655975 24.969136017548035 1.006389414815863 0.9865968326845588 0.18439774050445767 0.021428060488678357 1385.7669376854628 1480018.6116929152 0.0033778865220894707 0.008928402470673695 5.780157666714494e-07 6.2380603150655975 -0.019792582131304193 KEVS(ph)PEVVR ddPTM_A549_PD325901_60min_R1 4 KEVSPEVVR 9 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR 101.33 0.00030878 604099000.0 36016.2 34347.899999999994 37325.700000000004 38130.5 40283.5 36446.399999999994 36758.2 37883.8 38083.8 40293.2 40933.0 True False 39672.53811027492 37242.51807696555 39858.846459667875 40485.73438435136 37454.1259305306 36149.59260216539 38157.05341585885 37128.177889733815 36483.27032598196 37749.08047551945 35898.50049566588 1.1051307871498615 1.0374393794376435 1.1103206515403097 1.1277834401255649 1.0433339948294647 1.0069945012474775 1.0629149655001786 1.0342542829669557 1.0162895336084214 1.0515503420561254 1.0 15.131635962521235 -7.597067950682096 0.537584322715255 1.0042745876624652 1.0946440761327059 0.3801703517187638 0.03240964472076583 0.4946311984726873 0.2859223270964307 0.007513523742732147 0.017930707799298094 2.528902287804759e-08 7.597067950682096 0.09036948847024062 KEYEEDDILAS(ph)DDPSSIEQYENTR ddPTM_A549_MK2206_60min_R1 1 KEYEEDDILASDDPSSIEQYENTR 24 1 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 KEYEEDDILAS(1)DDPSSIEQYENTR 212.66 2.1920999999999993e-74 16130000.0 1439.8 2641.9 2668.0 2203.7 2424.5 2045.7 2338.7 2230.3 3479.7 3720.4 3782.6 True False 1682.803040269665 2776.3614255327357 3046.3625184153325 2743.6065989278536 2067.8592617157287 2262.1746161742403 2763.6115173768617 2546.4518550072926 2691.55350593907 2879.959056069982 2843.2760255509043 0.5918535608738903 0.976465668680478 1.0714269353518284 0.9649455678142473 0.7272805183643987 0.7956225831911372 0.9719814370964539 0.8956048699189872 0.9466381321235117 1.0129016775682094 1.0 11.473338447470411 -8.953695770373578 0.8113498709643512 0.9877689170236887 0.8761234274432015 0.14735494365505042 0.12605122868418772 0.891995135651566 1.2304954993053807 0.033761494426355995 0.031214461577662854 1.1125107844293732e-09 8.953695770373578 -0.11164548958048726 KFAADAVK ddPTM_A549_MK2206_60min_R1 1 KFAADAVK 8 1 P37837 P37837 TALDO1 Transaldolase 0 75.378 0.0075887 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KFAADAVK ddPTM_A549_PD325901_60min_R1 1 KFAADAVK 8 1 P37837 P37837 TALDO1 Transaldolase 0 74.16199999999999 0.0051286000000000005 3204600.0 3078.5 3793.3 3273.3 3023.4 4558.6 4420.5 3901.8 3583.0 3764.1 4165.0 3890.9 False True 3391.027053728081 4112.97470358751 3495.445821951918 3210.1485513604075 4238.419662316251 4384.500913612105 4050.2851341468863 3511.534254190875 3605.9079670103483 3902.0211891966533 3412.343966447276 0.9937530000114879 1.205322424711389 1.0243533056226926 0.9407458869694832 1.2420845330926689 1.284894183213593 1.1869510148954285 1.02906808009946 1.0567246451314225 1.143501718339139 1.0 11.736547363228105 -8.289571026913123 21.356126013502003 1.0277061420422111 1.1281428025579072 0.061493709785448436 0.10700020176758954 161.5893765731229 122669.78933277697 0.01729517491938366 0.020914034977426752 5.133682115703519e-09 8.289571026913123 0.10043666051569611 KFAETQPK ddPTM_A549_MK2206_60min_R1 1 KFAETQPK 8 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 78.556 0.0043023 3616600.0 3543.5 4203.6 3787.2 3966.4 4930.2 4002.9 3609.4 3591.8 5005.2 6344.6 5570.3 False True 4141.556169742716 4417.5452849727135 4324.281907699607 4938.168178058461 4204.974110996448 4426.484221090031 4265.181259169643 4100.948649426168 3871.53019166199 4911.350453483932 4187.0407775408985 0.9891368127957673 1.055051889790095 1.0327775957890986 1.1793933807730217 1.0042830567955638 1.0571867952262362 1.0186624601431844 0.9794384309375431 0.9246459247372767 1.172988445641179 1.0 12.03171525319876 -8.091164542146938 2.200072130902929 0.9640816104839605 1.0560946114808991 0.0 0.07949944218840382 0.23450468817651357 2.2411012948214246 0.008506378826607958 0.011520425837495097 8.106538653739667e-09 8.091164542146938 0.09201300099693865 KFAETQPK ddPTM_A549_PD325901_60min_R1 2 KFAETQPK 8 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 101.65 0.0023026999999999995 15418000.0 10736.1 9510.3 10731.2 10808.099999999999 13615.2 14523.6 12282.4 13366.0 13256.1 12158.1 13413.900000000001 False True 11826.020968500903 10311.766357400747 11459.48376394784 11475.691790023939 12658.91532189011 14405.324616884232 12749.813453187162 13099.404644575841 12698.992216329505 11390.435491085682 11764.07533771804 1.0052656608364494 0.8765471200561856 0.9741083285318975 0.9754860845909847 1.0760654754822105 1.2245182220737574 1.0837922307679075 1.1135090747486511 1.0794721940970515 0.9682389107595739 1.0 13.522100308006767 -6.65110017621975 4.037470272312833 1.0642910159063 0.9486278967506242 0.40976616087738205 0.06834122115425584 0.19393173860754703 5.806504398355516 0.01033237623687688 0.022196370264761508 2.2330570769388176e-07 6.65110017621975 -0.11566311915567573 KFAT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 KFATLPR 7 1 Q9NV70 Q9NV70 EXOC1 Exocyst complex component 1 1 KFAT(1)LPR;KFAT(1)LPR 61.78 0.017151 19369900.0 4097.1 4096.0 3869.3999999999996 3215.8 5029.7 4306.9 3928.4 3837.6 6116.9 6387.8 5888.9 True False 4788.590315522189 4304.468904569471 4418.1391037317435 4003.671144362746 4289.837792803299 4762.653299311158 4642.139429966761 4381.591552157097 4731.431916682099 4944.791543480229 4426.523604628226 1.081794822129808 0.972426510968757 0.9981058497264724 0.9044730135803727 0.969121183114891 1.0759353670522587 1.0487099684983254 0.989849358890993 1.0688821159193798 1.1170823845398947 1.0 12.111958399407266 -7.2383700813824845 24.696101138140058 1.0337900329677645 0.9807094140031527 0.24748902219345115 0.05202816807078853 817.3187723324662 874954.9977956136 0.0069919580619866905 0.01210383642212267 5.7760363623242616e-08 7.2383700813824845 -0.0530806189646118 KFAT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 KFATLPR 7 1 Q9NV70 Q9NV70 EXOC1 Exocyst complex component 1 1 KFAT(1)LPR;KFAT(1)LPR 72.643 0.012107999999999999 34160000.0 5303.4 5244.5 6200.3 6019.700000000001 6478.4 5781.700000000001 6077.9 6510.9 7169.5 7072.4 7050.1 True False 5841.797263843265 5686.472420574348 6621.089643432771 6391.523197269378 6023.379533266707 5734.615752116525 6309.197810454495 6381.034991797758 6868.190847607848 6625.847457016666 6182.982394266092 0.9448186799400833 0.9196973334175765 1.0708569459251518 1.0337281896834576 0.9741867515024147 0.9274837588789888 1.0204133552612815 1.032031887672094 1.1108216730452276 1.0716264473211623 1.0 12.594087182264106 -8.11542610760646 3.199286053318681 1.052370752161532 0.982051590518425 0.33785792838302064 0.04870986351945566 0.2882645515140427 5.602135081957942 0.00950054951068509 0.012567828411379137 7.666089626173238e-09 8.11542610760646 -0.07031916164310692 KFDGVEGPRT(ph)PK ddPTM_A549_MK2206_60min_R1 7 KFDGVEGPRTPK 12 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK 94.92200000000001 8.9983e-05 544377500.0 40903.1 42719.5 37265.1 33204.2 47099.8 36182.2 33901.6 32193.760000000002 50085.899999999994 49947.8 48920.8 True False 47806.54329521748 44893.74008026257 42549.851531109176 41339.2304905932 40171.48181272778 40010.97638819945 40061.081890581685 36757.32406925505 38741.52362074708 38664.55728974635 36772.41521460654 1.3000653619354332 1.2208537246808342 1.157113322113467 1.124191333349588 1.0924352283711591 1.088070396102416 1.089432980041758 0.9995896069033429 1.0535485198524133 1.051455474547895 1.0 15.166336315506069 -2.0000000000003864 0.2695441880576133 1.0110841965721045 3.0943034435847676 0.9348683978195631 0.022148721612229434 6.585247993534035 0.08138951048105879 0.008317486471368 6.485790381040511 0.009999999999991105 2.0000000000003864 2.0832192470126634 KFDGVEGPRT(ph)PK ddPTM_A549_PD325901_60min_R1 8 KFDGVEGPRTPK 12 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK 97.073 8.8002e-05 531174200.0 40333.4 38560.8 42831.5 41100.7 48873.99999999999 46624.40000000001 46168.99999999999 49223.6 56276.5 65293.799999999996 69598.1 True False 44428.01707612022 41810.45394513938 45738.30315673286 43639.39689253776 45441.25884614671 46244.706344670565 47925.98655964617 48241.796682832806 53911.39441180041 61171.138324890395 61037.9749187063 0.7278750177294032 0.6849908438283678 0.7493417535173738 0.7149548613082116 0.7444752042751722 0.7576382802060813 0.7851831031988956 0.7903570973166109 0.8832434969148721 1.0021816484960624 1.0 15.897419477645805 -8.966049016389897 0.45445062209384607 1.000521861354289 0.7068577891534127 0.9656111836500968 0.01945559389711307 0.09943585005978221 0.050851960550190554 0.009872846013843296 0.007874661156350616 1.0813119027820837e-09 8.966049016389897 -0.2936640722008763 KFDQLLAEEK ddPTM_A549_PD325901_60min_R1 2 KFDQLLAEEK 10 1 P35749-3;P35749-2;P35749;P35749-4;P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5;Q7Z406;Q7Z406-6;Q7Z406-2;A0A0C4DFM8;A1L2Z2 P35749-3;P35579;P35580-2;P35580-5;Q7Z406 MYH11;MYH9;MYH10;MYH14 Myosin-11;Myosin-9;Myosin-10;Myosin-14 0 ; 100.93 0.00044292 10046600.0 6468.8 6391.4 6575.799999999999 6206.8 7748.2 7488.799999999999 7205.6 6342.0 7392.8 7637.5 8029.1 False True 7125.507813921133 6930.025708620252 7022.073331497701 6590.179939334445 7203.993161838895 7427.813695703729 7479.813051055616 6215.503834797243 7082.106325154511 7155.266946576093 7041.571600658412 1.011920096538516 0.9841589493987777 0.9972309776472502 0.9358961767452937 1.0230660952400592 1.054851688933931 1.062236312466982 0.8826870175141117 1.0057564882947876 1.0161463026104927 1.0 12.781681742989816 KFELLPT(ph)PPLS(ph)PSRR ddPTM_A549_PD325901_60min_R1 2 KFELLPTPPLSPSRR 15 2 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 2 KFELLPT(0.992)PPLS(0.831)PS(0.178)RR;KFELLPT(0.997)PPLS(0.826)PS(0.177)RR 43.11600000000001 0.035387 6722100.0 1021.19 950.72 817.22 938.79 1254.73 1304.53 1075.8600000000001 862.05 1015.43 1355.94 1320.9299999999998 True False 1124.860457039655 1030.8405109521302 872.6814635430748 996.776926153216 1166.6020933835102 1293.9063401955427 1116.8024410331818 844.8557364848579 972.7550083529444 1270.325716993832 1158.463984065178 0.9709930325951054 0.8898338879166506 0.7533091020065545 0.8604297931260804 1.007024913532292 1.1169154656453648 0.964037256569858 0.7292896008041319 0.8396937856794129 1.0965603889869056 1.0 10.177997477057955 -11.030658172719964 1.382411746676737 0.9989363998609512 0.8961366186190988 0.1722565115301231 0.11056820331662164 0.8414019461183866 2.9129170283293995 0.07808078825610729 0.018363489071820244 9.318410263016524e-12 11.030658172719964 -0.1027997812418524 KFELLPTPPLS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 KFELLPTPPLSPSR 14 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;P04198 H0YBT0 MYC;MYCN Myc proto-oncogene protein;N-myc proto-oncogene protein 1 KFELLPT(0.008)PPLS(0.842)PS(0.15)R;KFELLPT(0.005)PPLS(0.869)PS(0.126)R 78.794 0.0002624 21918000.0 1767.48 2429.16 2277.43 2085.8999999999996 3331.48 2708.09 2789.63 2953.9300000000003 3737.99 3936.32 3357.2 True False 2065.787413262832 2552.793868218744 2600.4038194582563 2596.9455936396103 2841.423705184872 2994.6582863153435 3296.4696614444 3372.658623531225 2891.3412333434435 3047.102578107029 2523.5145859936288 0.8186152062400037 1.0116025809351867 1.0304691060203848 1.0290987054537146 1.1259787127666103 1.1867013977001455 1.3063010135708892 1.3364926211445882 1.1457596676442365 1.2074836400865256 1.0 11.30121871014521 -4.8847080871306545 0.8639604926018487 1.1175972885420484 0.4655603128222973 0.4755706266155275 0.10386950112567903 3.5277586801240397 1.2473787790254884 0.019315365620727977 2.5406054589524807 1.3040430019493067e-05 4.8847080871306545 -0.652036975719751 KFELLPTPPLS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 KFELLPTPPLSPSR 14 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;P04198 H0YBT0 MYC;MYCN Myc proto-oncogene protein;N-myc proto-oncogene protein 1 KFELLPT(0.022)PPLS(0.841)PS(0.137)R;KFELLPT(0.003)PPLS(0.963)PS(0.034)R 90.581 2.8583e-05 40652000.0 4088.1000000000004 3082.6 3169.8 3439.0 4380.1 3893.3 3392.6 3832.3999999999996 3861.0 4295.5 4758.5 True False 4503.120902499846 3342.3815203856416 3384.9216895558598 3651.419219464323 4072.4568865246847 3861.5942556195037 3521.7072495019556 3755.9597755403606 3698.735596989174 4024.281396925382 4173.234666616817 1.0790480915252396 0.8009090759076013 0.8111026481767364 0.8749613935380436 0.9758513987007993 0.9253240146090429 0.8438795157323263 0.9000116397924167 0.8862994517362446 0.9643074781097347 1.0 12.02695033223333 -10.685016023090979 0.7898491126056897 1.0051934350059775 0.8942122876288209 0.14386292538275836 0.0748052575537642 0.8863198175245007 0.9110630415206924 0.061525167175376205 0.013543673779066956 2.0653039559852044e-11 10.685016023090979 -0.11098114737715659 KFELLPTPPLS(ph)PSRR ddPTM_A549_MK2206_60min_R1 4 KFELLPTPPLSPSRR 15 2 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 KFELLPTPPLS(0.87)PS(0.13)RR;KFELLPT(0.01)PPLS(0.839)PS(0.151)RR;KFELLPTPPLS(0.871)PS(0.129)RR;KFELLPT(0.001)PPLS(0.833)PS(0.166)RR 78.021 0.00010858 102971000.0 3405.6499999999996 4025.14 4103.0 3942.85 6249.57 5527.65 5656.65 5788.12 7514.32 7239.54 7695.34 True False 3980.4404598516344 4230.002433237005 4684.867096348618 4908.8484270012605 5330.266531755315 6112.582254042895 6684.39008413641 6608.603735374073 5812.338517903287 5604.122885921105 5784.374697420532 0.68813669031964 0.7312808478889378 0.8099176387099845 0.8486394266938306 0.9214939921046744 1.0567403693209436 1.1555942403104051 1.1424923316812612 1.0048343722434205 0.9688381508929896 1.0 12.497945294178216 -6.571126980517627 1.2949167985435577 1.029209360740098 0.7201703800814976 0.8265111844273849 0.06182374733604385 0.16294244826932194 0.527917867814771 0.010765714087723628 0.035079028640966424 2.684559410164421e-07 6.571126980517627 -0.30903898065860047 KFELLPTPPLS(ph)PSRR ddPTM_A549_PD325901_60min_R1 4 KFELLPTPPLSPSRR 15 2 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 KFELLPTPPLS(0.798)PS(0.202)RR;KFELLPT(0.002)PPLS(0.79)PS(0.208)RR;KFELLPTPPLS(0.873)PS(0.127)RR;KFELLPT(0.009)PPLS(0.803)PS(0.188)RR 85.146 2.7188e-05 193628000.0 5666.0 6452.53 6500.9 6251.530000000001 7889.550000000001 6784.299999999999 7500.639999999999 7814.13 6783.58 7470.390000000001 8002.119999999999 True False 6241.208148911254 6996.307348256004 6942.090167087413 6637.672809845246 7335.41522546992 6729.050910127495 7786.0809597077005 7658.271047083599 6498.489723134895 6998.708300495268 7017.909969618102 0.8893257644983562 0.9969217870483349 0.9891962417786879 0.945819031389833 1.0452421386461725 0.9588397313814035 1.1094586555563066 1.091246693137664 0.925986476211311 0.9972639048939127 1.0 12.776825724676515 -5.258038368168797 23.76078201845498 0.9877770614620728 0.8893256979755488 0.202978303851175 0.05685353856635048 228.5564206876112 1596625.5671022302 0.008473891631019772 0.08400070186687522 5.520286676163492e-06 5.258038368168797 -0.09845136348652395 KFES(ph)PK ddPTM_A549_MK2206_60min_R1 2 KFESPK 6 1 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KFES(1)PK;KFES(1)PK 60.973 0.026405 19809700.0 9804.7 9797.7 10657.2 9296.0 15383.9 12467.599999999999 11657.0 12314.1 16078.9 14493.400000000001 12786.3 True False 11459.493658099731 10296.361080639726 12168.551211115404 11573.5204173133 13120.94868892911 13786.913156676916 13774.926009347966 14059.661385349636 12437.05482272716 11219.330873896539 9611.108826072421 1.192317542697376 1.071297939391592 1.2660923345395187 1.2041816013899844 1.365185737293434 1.434476854457899 1.4332296365202108 1.462855289621678 1.2940291331410885 1.1673295014058558 1.0 13.23048716785616 -10.423810059854462 0.92769728343867 1.0121216607760344 1.3026482870335039 0.2943709622426468 0.12232557622143347 0.3931699055683528 0.6424488460466056 0.06877006216127735 0.02396108833411325 3.76868587684295e-11 10.423810059854462 0.2905266262574695 KFES(ph)PK ddPTM_A549_PD325901_60min_R1 3 KFESPK 6 1 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KFES(1)PK;KFES(1)PK;KFES(1)PK 69.598 0.021708 29388600.0 13052.999999999998 13138.5 13219.7 12349.6 16489.600000000002 12802.2 12364.3 14144.099999999999 13703.3 14236.400000000001 15616.6 True False 14378.130950889268 14245.727504569762 14116.868338513976 13112.406744023443 15331.427382031774 12697.943127755887 12834.830202504569 13861.984829668207 13127.397955509392 13337.511274400784 13695.857201783796 1.0498160676658201 1.04014865916639 1.0307400355105445 0.9573994932070142 1.1194207968256966 0.9271375234623549 0.9371323031049795 1.0121297721958413 0.9584940732150474 0.9738354509613067 1.0 13.74145194439236 -7.286563417844919 24.999716673611275 0.975653214856746 1.0344924329730159 0.4079076120827342 0.04209914898489158 687.3432313067086 683940.4253802191 0.006127772635568182 0.009797742389823717 5.169357669197304e-08 7.286563417844919 0.0588392181162698 KFGDPVVQSDMK ddPTM_A549_PD325901_60min_R1 3 KFGDPVVQSDMK 12 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ;; 68.513 0.0030265 15182700.0 9141.3 9432.400000000001 9261.2 10283.5 11777.2 10992.599999999999 9714.3 11375.7 11551.3 11462.0 11867.0 False True 10069.318046530616 10227.301451010679 9889.720724119734 10918.688439476995 10950.010101134334 10903.07991018491 10083.98300236893 11148.802739435983 11065.839031727812 10738.287363882844 10407.43423111101 0.9675120517629925 0.9826919127135236 0.95025541401514 1.0491239432325874 1.052133490154701 1.0476241951731255 0.9689211364146616 1.0712345129319958 1.0632629316694242 1.0317900767302293 1.0 13.345326821068676 -6.262509480909617 24.9999216194017 1.032959963536868 0.968407003282351 0.5334922773866875 0.028524613498896553 67.33123283972009 1573028.9579522645 0.004553525780014537 0.011175063951560498 5.463746220652055e-07 6.262509480909617 -0.06455296025451707 KFGGPGAR ddPTM_A549_PD325901_60min_R1 1 KFGGPGAR 8 1 P62249;M0R210 P62249 RPS16 40S ribosomal protein S16 0 49.442 0.033717000000000004 4546200.0 1541.8 1741.8 1425.8 1156.8 1820.0 1864.9 1195.4 1486.1 1839.5 1775.4 1560.3 False True 1698.3224009868286 1888.5875988476314 1522.5633620319088 1228.2529087165829 1692.1694786591445 1849.7128727056254 1240.8916011479794 1456.4585696771037 1762.1922120335641 1663.3009410083412 1368.3929915566277 1.2411072049228247 1.380150008441107 1.112665273372895 0.8975878393818524 1.2366107464012965 1.3517409721614169 0.9068239963260788 1.0643569344945973 1.2877822547373372 1.2155140747368476 1.0 10.418266904906268 -11.097889726010289 1.4347630133492428 1.0000641624787872 1.1752636666712075 0.0 0.16575094742866506 0.6869559925718169 2.5289904423322134 0.11446685325765163 0.02501737069645504 7.981973360111005e-12 11.097889726010289 0.17519950419242036 KFGLHGS(ph)SGK ddPTM_A549_MK2206_60min_R1 4 KFGLHGSSGK 10 1 Q9NV70-2 Q9NV70-2 EXOC1 Exocyst complex component 1 1 KFGLHGS(0.913)S(0.087)GK;KFGLHGS(0.986)S(0.014)GK;KFGLHGS(0.975)S(0.025)GK;KFGLHGS(0.989)S(0.011)GK 80.52199999999999 0.00033487 31872500.0 9660.95 10589.9 10562.6 9541.6 14446.800000000001 10899.7 11408.5 11035.6 17622.8 16138.2 15659.4 True False 11291.482172449798 11128.880676879935 12060.535508625855 11879.292428338693 12321.694857560236 12053.0990193647 13481.276775984066 12599.930095107597 13631.263937828837 12492.56941153333 11770.738802546353 0.9592840655003849 0.945470022193716 1.0246200948760167 1.009222328998487 1.0468072619957123 1.0239883172632513 1.1453212072862984 1.0704451357277476 1.1580635817761922 1.061324154846663 1.0 13.522917255008135 -6.351754250910426 0.867817833775749 1.0789005294109262 0.9466435801905885 0.5148518222455868 0.044524593575563105 0.6614429982131371 0.7996583426498939 0.009979279945740927 0.058046784102861744 4.448829369113481e-07 6.351754250910426 -0.1322569492203377 KFGLHGS(ph)SGK ddPTM_A549_PD325901_60min_R1 4 KFGLHGSSGK 10 1 Q9NV70-2 Q9NV70-2 EXOC1 Exocyst complex component 1 1 KFGLHGS(0.985)S(0.015)GK;KFGLHGS(0.892)S(0.108)GK;KFGLHGS(0.988)S(0.012)GK;KFGLHGS(0.986)S(0.014)GK 105.17 7.1895e-05 52421000.0 14602.5 15666.900000000001 15015.0 16396.4 17867.800000000003 16503.1 15429.2 18142.5 17725.4 17813.0 19374.0 True False 16084.93505020766 16987.20464599032 16034.00819252989 17409.16838907381 16612.82736856366 16368.70422518536 16016.366649182197 17780.63360498409 16980.46307973892 16688.284140014413 16991.12082190483 0.946667098586638 0.9997695163282306 0.94366983559195 1.0246038840845646 0.9777358152351269 0.9633681260204414 0.94263155544948 1.0464661979250611 0.9993727463727896 0.9821767683801057 1.0 14.052493402811411 -8.24578005059027 24.978674949564304 1.003202702581099 0.9732494129634786 0.27629152941407487 0.027495680166083933 891.5145748894553 1422082.987143369 0.004039834608030653 0.005205263774342923 5.67832112438892e-09 8.24578005059027 -0.02995328961762045 KFGYVDFESAEDLEK ddPTM_A549_MK2206_60min_R1 2 KFGYVDFESAEDLEK 15 1 P19338 P19338 NCL Nucleolin 0 ; 145.55 1.2951e-13 9413000.0 4883.5 5389.799999999999 5136.5 5093.2 6784.4 5122.0 5247.9 4305.1 7941.8 7241.4 6972.9 False True 5707.715409888116 5664.117798302863 5864.932936971644 6341.034228642434 5786.423747240334 5664.006640291569 6201.375500082115 4915.361108815801 6142.9949804485705 5605.562710629282 5241.336487750201 1.0889809160751105 1.080662882747705 1.1189766103891408 1.2098124673854451 1.1039977610222287 1.0806416747959633 1.183166834370522 0.9378068208945841 1.1720283547537318 1.0694910971143206 1.0 12.355719015966777 KFGYVDFESAEDLEK ddPTM_A549_PD325901_60min_R1 2 KFGYVDFESAEDLEK 15 1 P19338 P19338 NCL Nucleolin 0 ; 168.69 3.9722e-27 22100500.0 9336.8 9270.3 9631.6 8804.3 11313.5 11414.1 11666.9 11095.099999999999 10488.0 10739.2 11205.8 False True 10284.665062611128 10051.540715120676 10285.258295515872 9348.121614983935 10518.878789456181 11321.147353932793 12110.890263872647 10873.79952656243 10047.22583300246 10061.125079236659 9827.557639418876 1.046512820373474 1.022791326585905 1.0465731845989013 0.9512151399131055 1.0703451636105779 1.1519797460686516 1.2323397845356 1.1064600102620636 1.0223522671291678 1.0237665805063236 1.0 13.262617204859145 -4.3683070268296955 16.338357630208858 1.0421867160548741 1.0457579466487332 0.0 0.07647878152662722 0.0 0.0 0.011186955744634242 0.0 4.2824566277229625e-05 4.3683070268296955 0.0035712305938591093 KFHKAS(ph)QED ddPTM_A549_MK2206_60min_R1 2 KFHKASQED 9 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KFHKAS(1)QED;KFHKAS(1)QED 52.928000000000004 0.007526000000000001 10691700.0 4115.3 4070.6 4122.9 3166.3 5113.5 3505.2 3783.1 3877.8 5847.0 6175.799999999999 5870.0 True False 4809.862030574908 4277.776153061641 4707.589215582675 3942.043642140606 4361.310923812492 3876.117937436549 4470.440300760427 4427.4900252644375 4522.663835740365 4780.682490720619 4412.316996241688 1.0900989286743994 0.9695078927251497 1.0669199922835313 0.8934180489521378 0.988440070721881 0.8784767596566926 1.0131729666223546 1.0034387894241674 1.0250088195369165 1.0834857275197356 1.0 12.10732072755816 -12.228727686478074 13.617083574130135 1.534177459981717 0.9995928251296444 0.0009304093581959938 0.06572014125593595 2271321.5634137695 307938.8598974504 37959028.00513701 0.007921570560125274 5.905712670834193e-13 12.228727686478074 -0.5345846348520726 KFHS(ph)S(ph)DSEEEEHKK ddPTM_A549_PD325901_60min_R1 1 KFHSSDSEEEEHKK 14 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KFHS(0.667)S(0.667)DS(0.667)EEEEHKK 50.563 0.010223999999999999 10031000.0 1966.9 1566.5 1521.7 1557.5 1873.0 1996.5 1627.8 1915.4 2003.1 1800.0 2148.0 True False 2166.5782400447492 1698.514452632228 1624.971712725456 1653.7032376608556 1741.4469414992182 1980.241165937464 1689.7468197663393 1877.1958443977685 1918.9166729678875 1686.3476928100786 1883.8096172938779 1.1501046709577123 0.901638062062859 0.862598692462221 0.8778505123232284 0.924428310330443 1.0511896466385555 0.8969838588008098 0.9964891500524293 1.018636201531045 0.8951794689489607 1.0 10.879437454461687 -8.472689621040514 12.145863668601551 1.0087364721114467 0.9466151725851758 0.0 0.08643397054131824 2.3249769277336347 560.8171330510655 0.012609384165006093 0.01523244815596382 3.3675215139175454e-09 8.472689621040514 -0.06212129952627088 KFHSS(ph)DS(ph)EEEEHKK ddPTM_A549_MK2206_60min_R1 1 KFHSSDSEEEEHKK 14 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KFHS(0.442)S(0.779)DS(0.779)EEEEHKK 45.115 0.019888999999999997 4736400.0 1211.4 1007.2 1087.3 837.45 980.16 767.89 670.71 800.97 1345.3 1750.6 1736.1 True False 1415.8547041135382 1058.4621779009701 1241.4954896075674 1042.625287594559 835.9797624101004 849.1476101158718 792.5693251891374 914.5099503677484 1040.5916980026527 1355.138244155497 1304.9784560775468 1.0849640448235895 0.8110955188351955 0.9513532455847632 0.7989597703616054 0.6406080947289012 0.6506985660653789 0.607342842709765 0.7007854774220156 0.7974014384347943 1.0384372537679423 1.0 10.349810274164799 -3.0334068017939035 1.3992934808322477 0.8286263059320443 145.12750719365815 0.22109150211261253 0.14293903122567417 1145.4337302582162 5.057247600069656 0.02341966793483081 528448.8883814295 0.000925962072298931 3.0334068017939035 144.2988808877261 KFHSS(ph)DS(ph)EEEEHKK ddPTM_A549_PD325901_60min_R1 1 KFHSSDSEEEEHKK 14 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KFHS(0.242)S(0.808)DS(0.95)EEEEHKK 61.167 0.0026711 8612000.0 1764.1 2271.5 1997.9 2039.4 2186.6 2177.7 2367.0 2574.9 2199.9 2079.1 2278.6 True False 1943.1901333382186 2462.9272768299434 2133.4895083486817 2165.369106186548 2033.020759360488 2159.965533214134 2457.0774802720985 2523.5415995300264 2107.4458533583243 1947.8252711785753 1998.3466452354899 0.9723989268684806 1.2324825038249088 1.0676273375469683 1.0835803244393445 1.017351401073317 1.0808763025994415 1.2295551855982176 1.2628147401486725 1.0545947362951025 0.9747184132555936 1.0 10.964591148064796 -8.981394130143778 18.072685228126396 1.024083133410573 1.1209043637296472 0.23195724128583362 0.08843125942265295 6.91560923399142 6718.571066592273 0.015604757426328655 0.015937729927943643 1.0437725466945354e-09 8.981394130143778 0.09682123031907408 KFLDGIYVSEK ddPTM_A549_MK2206_60min_R1 1 KFLDGIYVSEK 11 1 H0Y9R4;H0Y9V9;D6RAN4;A0A2R8Y5Y7;P32969 H0Y9R4 RPL9 60S ribosomal protein L9 0 95.40100000000001 0.00028778 1605400.0 918.78 1206.9 747.55 980.27 1075.4 1112.9 935.35 776.43 1480.0 1249.8 1529.3 False True 1073.8476019856666 1268.326054913305 853.5638308251059 1220.4361940059928 917.210084573766 1230.6663393167687 1105.2909876334918 886.4913302171506 1144.7823630743526 967.4693119762029 1149.5326034671918 0.9341601958454715 1.1033406543562236 0.7425312063795387 1.0616803649804654 0.7978982777933393 1.0705797605086305 0.9615133875278877 0.7711754564797356 0.9958676766726653 0.8416197235799541 1.0 10.166831669546704 -8.942744101217658 24.99991218525118 0.9981791931849627 0.9322883332856753 0.0 0.12450750937831497 166.83886730193265 72847.42170640951 0.01816412865444558 0.019337005217286995 1.1409218534665485e-09 8.942744101217658 -0.06589085989928745 KFLDGIYVSEK ddPTM_A549_PD325901_60min_R1 2 KFLDGIYVSEK 11 1 H0Y9R4;H0Y9V9;D6RAN4;A0A2R8Y5Y7;P32969 H0Y9R4 RPL9 60S ribosomal protein L9 0 ; 103.88 0.0002061 6306200.0 4055.7 3547.7000000000003 3768.7 3604.6 3961.5 4343.2 3999.9 4169.4 3726.5 3663.3 4138.6 False True 4467.431678351461 3846.6771296542324 4024.4666450341238 3827.247955359434 3683.2579064330803 4307.83041918337 4152.1183833292625 4086.238046168975 3569.888164252826 3431.9986128173095 3629.5784367469473 1.230840373394837 1.0598137488115182 1.1087972653488376 1.054460737536685 1.0147894502410157 1.186867977715978 1.1439671178591881 1.125816156719102 0.9835544888933109 0.945563974612236 1.0 11.825586278466398 -8.763085114618773 24.999822669213184 0.9922340572722829 1.1114918316589277 0.5165758210168635 0.059376301327543325 27.101263409910654 411683.1680503843 0.009713343415558325 0.010606789213965951 1.725499689118909e-09 8.763085114618773 0.11925777438664487 KFLPLFDR ddPTM_A549_MK2206_60min_R1 2 KFLPLFDR 8 1 P61604;B8ZZL8;S4R3N1 P61604;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 ; 107.15 0.0018692000000000001 6828500.0 1666.3899999999999 2224.55 2391.8999999999996 1846.5900000000001 2837.8 2323.1 2008.9099999999999 2082.5 2984.2 2708.4 3319.0 False True 1947.6358926760424 2337.7700931787163 2731.1073867307464 2299.004632896574 2420.3633792109276 2568.928900051023 2373.902943247767 2377.700752388774 2308.283464788163 2096.570558934508 2494.8007002599957 0.7806779485323495 0.9370568530524644 1.0947196649600603 0.9215183532123361 0.9701630190173867 1.0297130747892214 0.9515401142064657 0.9530624037988213 0.925237621004197 0.8403759701991481 1.0 11.284708853639046 -5.29372429271785 4.22578485112716 0.9718177689434623 0.7708131814377571 0.41527518665407825 0.06199544029424628 0.10509734258596545 3.9791220881729332 0.006601811474548715 0.05886068751292887 5.084821446569471e-06 5.29372429271785 -0.20100458750570516 KFLPLFDR ddPTM_A549_PD325901_60min_R1 2 KFLPLFDR 8 1 P61604;B8ZZL8;S4R3N1 P61604;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 ; 111.61 0.0015187999999999998 11912500.0 2204.02 2631.1 2273.34 2712.53 2342.41 2779.7 3151.8999999999996 3112.9 3215.3 2728.3999999999996 2864.5 False True 2427.7704878862314 2852.8320308462526 2427.622523103955 2880.0768174974005 2177.8872024758075 2757.063044806599 3271.8472792858593 3050.810767477193 3080.1721225069414 2556.1283583683435 2512.1846595615984 0.9663981024029905 1.1355980620246684 0.9663392035550442 1.146443119352541 0.8669295842511318 1.0974762680414323 1.3023912341924855 1.2144054601502066 1.2260930384968047 1.0174922248010279 1.0 11.294726798908473 -7.511145526152004 24.90710676720161 1.1355290796313187 1.0228955201337662 0.2509262679226093 0.11006152978726971 787.7848766442802 1672300.5158395362 0.018536337222675333 0.028643255584969402 3.082154989133403e-08 7.511145526152004 -0.1126335594975525 KFMERMS(ph)PK ddPTM_A549_MK2206_60min_R1 1 KFMERMSPK 9 2 A6NGH7 A6NGH7 CCDC160 Coiled-coil domain-containing protein 160 1 KFMERMS(1)PK 42.743 0.017381 5895700.0 963.94 1223.1 735.92 1098.0 1273.1 1290.4 1047.1 1213.8 965.74 1287.3 1173.5 True False 1126.6295059296713 1285.3505657175097 840.2845219461065 1367.0100492910933 1085.8286764653717 1426.9492715018048 1237.3445161180623 1385.8598671065993 747.0014319698813 996.4980359313216 882.0875630476364 1.277230915757542 1.4571689020040013 0.9526089666686839 1.5497441598292538 1.2309760640018597 1.6176957155723366 1.4027456773599702 1.5711137138340505 0.8468563249990411 1.1297042126842758 1.0 9.784778066083916 -8.7701230698881 24.99966014979646 0.9276821253936555 1.3796263993767337 0.4464802545587141 0.18981648622500363 93.94067648409379 270446.98954011465 0.030081865706772994 0.03226437952880402 1.697762474242102e-09 8.7701230698881 0.45194427398307824 KFNALFAQGNYSEAAK ddPTM_A549_PD325901_60min_R1 2 KFNALFAQGNYSEAAK 16 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 148.03 1.5718000000000002e-14 7505700.0 10057.1 10245.3 9526.0 11174.9 12796.0 11392.8 10125.8 11297.0 11665.5 12032.0 12509.6 False True 11078.089388354289 11108.707386883474 10172.49164449149 11865.148192960705 11897.253103803529 11300.0208140708 10511.142860050373 11071.67247267495 11175.239602869002 11272.297466606036 10970.998504888039 1.0097612704457608 1.012552082833124 0.9272165737657534 1.0815012131916968 1.084427556753636 1.029990188134304 0.9580844309993497 1.0091763723914517 1.0186164548185805 1.0274632214728456 1.0 13.421407215454124 KFNS(ph)PSKR ddPTM_A549_MK2206_60min_R1 1 KFNSPSKR 8 2 A0A087WZ58;O15151-5;O15151;Q5T0Y3;Q5T0Y2;A0A087WTR9 A0A087WZ58 MDM4 Protein Mdm4 1 KFNS(0.971)PS(0.029)KR 41.283 0.018594 10613000.0 1750.0 2193.2 1803.3 1569.4 2313.2 1953.0 2161.3 1614.8 2725.4 2717.8 2576.4 True False 2045.357216607802 2304.8245120853917 2059.035056018879 1953.9030704530423 1972.93134427751 2159.6651637035197 2553.9802336796565 1843.7028451175956 2108.1012515694847 2103.8470924059234 1936.6087749773583 1.0561540580810986 1.1901342913786697 1.0632168368869195 1.0089301957623766 1.0187557599498 1.1151788588424472 1.318789972801562 0.9520264851320583 1.0885529792118862 1.0863562737035106 1.0 10.919316821253313 -10.504133997875957 0.5988054915763136 0.9921617339439673 1.0941404055468187 0.007631134103404658 0.09634955312025453 1.79333765925323 1.0271177334011472 0.09564397982733429 0.0204313107172166 3.1323191247274214e-11 10.504133997875957 0.10197867160285135 KFNS(ph)PSKR ddPTM_A549_PD325901_60min_R1 1 KFNSPSKR 8 2 A0A087WZ58;O15151-5;O15151;Q5T0Y3;Q5T0Y2;A0A087WTR9 A0A087WZ58 MDM4 Protein Mdm4 1 KFNS(0.987)PS(0.013)KR 40.727 0.019717 17080000.0 2614.1 2850.4 2773.1 2442.4 3359.5 2826.5 2793.4 3129.9 3299.3 2744.2 2909.4 True False 2879.481507601291 3090.6132114796706 2961.299242004969 2593.261500907142 3123.540309645823 2803.4819211230883 2899.704365607134 3067.4716891409516 3160.6418946248114 2570.930743671898 2551.56224420615 1.1285170542634222 1.2112631069445974 1.1605827953949435 1.0163426374550253 1.2241677884748716 1.0987315427985245 1.1364427311900829 1.202193556557862 1.2387085213389182 1.0075908394983224 1.0 11.317165120706399 -10.979103180889798 1.2633432368772708 1.0004224499489216 1.1641397082142975 0.4806799063732089 0.06117011785984675 0.31738021703022745 0.9048982202766865 0.04427633170027104 0.01030339912076509 1.0492931050643963e-11 10.979103180889798 0.16371725826537586 KFNSLPQYS(ph)PVTFDR ddPTM_A549_MK2206_60min_R1 2 KFNSLPQYSPVTFDR 15 1 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 KFNS(0.003)LPQY(0.014)S(0.959)PVT(0.024)FDR;KFNSLPQY(0.016)S(0.974)PVT(0.009)FDR 79.51100000000001 0.00018643 11367600.0 2560.6800000000003 2434.29 2612.69 2581.4 3295.8 2496.69 2688.15 2224.4 3785.7 3558.3999999999996 4093.3 True False 2992.860181384724 2558.1849633067413 2983.208728725098 3213.8431158834514 2810.9921859198603 2760.888078631307 3176.5520590227957 2539.7155119393 2928.244994520657 2754.554968583869 3076.820640667141 0.9727119422651129 0.8314377931214265 0.9695751157201853 1.0445337870544835 0.9136028758928106 0.8973184988880825 1.0324137900784591 0.8254350215840396 0.9517113073857082 0.8952601695972127 1.0 11.587224630718344 -10.000517375537283 1.0809415142620882 0.9934761427671057 0.9374593987548264 0.0 0.07304525453493024 0.7438942444994903 1.7532161650293527 0.02191151508540986 0.012098886134636258 9.988094081179474e-11 10.000517375537283 -0.056016744012279296 KFNSLPQYS(ph)PVTFDR ddPTM_A549_PD325901_60min_R1 2 KFNSLPQYSPVTFDR 15 1 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 KFNSLPQYS(0.956)PVT(0.044)FDR;KFNSLPQYS(0.5)PVT(0.5)FDR 116.39 3.9281e-07 18539200.0 7064.0 7184.9 7500.3 6595.8 7792.5 7883.4 8240.9 7153.4 7990.9 8572.2 8595.6 True False 7781.132079758048 7790.396738408739 8009.315460967821 7003.207585851348 7245.181682665594 7819.200204132939 8554.51195909351 7010.719825266257 7655.070262103291 8030.949829059195 7538.39569199779 1.0322000061654935 1.0334290022316626 1.0624694945994844 0.9290050392665699 0.961103924321265 1.0372499035084124 1.1347921107636145 0.9300015695260366 1.0154773740823069 1.0653393848221928 1.0 12.880041809022318 -10.26707544916178 0.0023644462658955656 7.2882037036110965e-06 2.013583816901063 0.0 0.05956543439683065 251930.86649669384 169.39500538412418 72778.38149930169 71480.29362543937 5.4066038687617725e-11 10.26707544916178 2.0135765286973593 KFPAGK ddPTM_A549_MK2206_60min_R1 2 KFPAGK 6 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 79.027 0.044131000000000004 6073400.0 4931.5 6170.700000000001 5180.4 4751.2 7268.0 5508.8 4635.1 5211.7 6958.1 7489.7 7145.1 False True 5763.81663640079 6484.762272809283 5915.058617091004 5915.244213289475 6198.886827861384 6091.737559554508 5477.23767229379 5950.474435161858 5382.101459802463 5797.77156817744 5370.774475271974 1.073181654329083 1.2074166030739724 1.1013418352092448 1.1013763919010824 1.1541886289216183 1.134238197414913 1.019822689914088 1.107936008588506 1.00210900394024 1.0795038210730015 1.0 12.390914427075696 -8.268648780659678 0.8852045127921505 0.998454323397896 1.132619609944696 0.34975554478044724 0.04957694725041531 0.2290235903319712 0.35522353386787475 0.008391620933181564 0.011192760460913869 5.387052640392419e-09 8.268648780659678 0.13416528654679993 KFPAGK ddPTM_A549_PD325901_60min_R1 1 KFPAGK 6 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 67.055 0.055777 4666000.0 4547.9 4237.6 4690.3 4561.5 5337.4 4997.8 4606.2 5264.5 5223.1 5014.3 4996.6 False True 5009.599460012972 4594.717423858497 5008.611963065132 4843.253495081859 4962.519437030396 4957.099573815311 4781.491461609352 5159.495417579642 5003.591270819517 4697.6962422542065 4382.0498760570745 1.1432091376651696 1.0485315215062725 1.1429837872068749 1.1052483728094329 1.132465302173973 1.1312284693289845 1.0911540481852504 1.1774159499576726 1.1418380466544802 1.0720316689962341 1.0 12.09739018969554 -10.722709769464936 0.9526261655615716 0.9991648248249276 1.1230991503841516 0.4033706045270462 0.03780510265546295 0.2621571050677343 0.4185142963241376 0.0222509068085312 0.005617638833953713 1.8936086576447393e-11 10.722709769464936 0.12393432555922401 KFPDRLAEDEGDS(ph)EPEAVGQSR ddPTM_A549_MK2206_60min_R1 5 KFPDRLAEDEGDSEPEAVGQSR 22 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KFPDRLAEDEGDS(1)EPEAVGQSR;KFPDRLAEDEGDS(1)EPEAVGQSR;KFPDRLAEDEGDS(0.999)EPEAVGQS(0.001)R;KFPDRLAEDEGDS(1)EPEAVGQSR;KFPDRLAEDEGDS(1)EPEAVGQSR 121.3 6.7035e-16 48527400.0 7445.639999999999 8004.7 7017.0 7326.71 10541.099999999999 6613.49 6378.32 5955.130000000001 12668.199999999999 12626.6 12354.3 True False 8702.282003579272 8412.105039161923 8012.1161138382295 9121.75427890851 8990.518153710727 7313.325122120636 7537.178181688629 6799.287914320753 9798.872926958455 9774.242290445447 9286.386348665872 0.9371010075226393 0.9058534421594948 0.8627808291638964 0.9822716755930562 0.9681395772428044 0.7875318608913255 0.8116373687997007 0.7321780140342289 1.0551868680723377 1.0525345299519724 1.0 13.180901588365447 -8.796431192778172 24.99963508154918 1.0260605052312066 0.8760230952135907 0.4904989993595197 0.07352550561979194 119.84980494181424 85625.24828044392 0.013549457578065143 0.014424785522606473 1.5979706826633703e-09 8.796431192778172 -0.15003741001761595 KFPDRLAEDEGDS(ph)EPEAVGQSR ddPTM_A549_PD325901_60min_R1 4 KFPDRLAEDEGDSEPEAVGQSR 22 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KFPDRLAEDEGDS(1)EPEAVGQSR;KFPDRLAEDEGDS(1)EPEAVGQSR;KFPDRLAEDEGDS(1)EPEAVGQSR;KFPDRLAEDEGDS(1)EPEAVGQSR 220.05 1.0510999999999998e-74 144581000.0 9226.9 9385.3 9840.6 10882.599999999999 11172.599999999999 15895.6 12506.0 14044.8 13608.1 12036.899999999998 13734.5 True False 10163.608095515232 10176.232168713215 10508.442292334972 11554.793485822167 10387.875119377559 15766.151503769383 12981.922673545789 13764.665446067536 13036.198880442476 11276.88807976979 12045.243570168892 0.8437860169707405 0.8448340715928362 0.8724142630340873 0.9592826760629923 0.8624047375101694 1.3089109748528163 1.077763400791385 1.142746957824659 1.0822694289659507 0.9362108797615348 1.0 13.556175946552308 KFPNS(ph)PVKAEK ddPTM_A549_MK2206_60min_R1 2 KFPNSPVKAEK 11 2 A0A0C4DFM7;Q5TAX3;X6R5G7;E9PRG2;E9PKY2;Q5TAX3-2 A0A0C4DFM7 ZCCHC11 Terminal uridylyltransferase 4 1 KFPNS(1)PVKAEK;KFPNS(1)PVKAEK 77.078 0.00024106 24747000.0 9213.099999999999 10425.099999999999 9581.7 9597.5 12923.9 9998.3 9526.9 8198.6 15922.900000000001 14721.8 15232.3 True False 10768.046041331056 10955.693060797657 10940.529138943104 11948.887930848141 11022.811430186808 11056.313469665605 11257.814411808966 9360.776657159475 12316.388573646356 11396.135155265847 11449.699519906691 0.9404653827473377 0.9568541988154236 0.9555298040722962 1.0435983852740895 0.9627162189734598 0.965642238072961 0.9832410354731048 0.8175565342028959 1.075695353597081 0.9953217667810657 1.0 13.483022117013263 KFPNS(ph)PVKAEK ddPTM_A549_PD325901_60min_R1 2 KFPNSPVKAEK 11 2 A0A0C4DFM7;Q5TAX3;X6R5G7;E9PRG2;E9PKY2;Q5TAX3-2 A0A0C4DFM7 ZCCHC11 Terminal uridylyltransferase 4 1 KFPNS(1)PVKAEK;KFPNS(1)PVKAEK 57.136 0.0028407 42443000.0 8240.9 8909.4 8411.1 8977.6 11239.1 10511.9 8965.9 8886.1 9926.5 8633.2 8851.7 True False 9077.51010137006 9660.226405542018 8981.927826053157 9532.12596239108 10449.704388790107 10426.294571609338 9307.102230828732 8708.859764489409 9509.32372533361 8088.09827864887 7762.9970155494475 1.1693306184695955 1.244393935253663 1.157018070219809 1.227892519254874 1.3460915118038985 1.3430759474369562 1.1989058107566457 1.1218424723138987 1.2249552210681305 1.0418783187019445 1.0 12.922398017581566 -10.746521639910755 0.4972300633471591 0.9483625050310481 1.2379549645299939 0.5926529046845799 0.06601240119689893 0.865882628241309 0.2805051830782609 0.12218421177839166 0.017147390728946676 1.792579229975696e-11 10.746521639910755 0.28959245949894574 KFPTTATKIS(ph)PKEEER ddPTM_A549_PD325901_60min_R1 2 KFPTTATKISPKEEER 16 3 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KFPT(0.136)T(0.136)AT(0.136)KIS(0.591)PKEEER;KFPT(0.028)T(0.217)AT(0.217)KIS(0.538)PKEEER 49.973 0.006431699999999999 24050600.0 4856.0 4297.5 4385.7 5386.700000000001 6466.200000000001 6365.2 5530.200000000001 6448.0 5804.1 5890.9 5643.5 True False 5348.977545201738 4659.665407077562 4683.339975356529 5719.424224916681 6012.036419178995 6313.363921575333 5740.65478724156 6319.389581641856 5560.173861301445 5518.947568652715 4949.385277094039 1.0807357370130446 0.941463463885644 0.9462467989774853 1.1555827450706684 1.2147036616856137 1.2755854652887588 1.159872280262672 1.276802921544268 1.1234069586447757 1.1150773802546012 1.0 12.273033635559312 -6.260651609242617 24.998830985153752 1.114213050562205 0.9846801432831201 0.3355861282456746 0.09148893850340872 88.64635194745289 2812994.1304400316 0.016209394150963598 0.04025635601517865 5.487169688155018e-07 6.260651609242617 -0.12953290727908484 KFPVFNPATEEELCQVEEGDKEDVDK ddPTM_A549_MK2206_60min_R1 2 KFPVFNPATEEELCQVEEGDKEDVDK 26 2 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 324.02 2.1758999999999992e-210 61640000.0 10333.0 12185.4 11466.3 9930.5 15288.900000000001 13586.5 11871.1 10603.8 15342.3 16343.400000000001 16576.6 False True 12076.95778240481 12805.58481194844 13092.39375746092 12363.472945797083 13039.92306308336 15024.214412011212 14027.925207992683 12106.921122775542 11867.293546618663 12651.414589015738 12460.17272911414 0.9692448126490318 1.0277212916982459 1.0507393470452902 0.992239290303648 1.046528274252137 1.2057789838583854 1.1258210871519758 0.9716495417825791 0.9524180606974918 1.0153482511084897 1.0 13.60503644740648 -8.293662154782103 24.28141308535349 0.9764618330057738 1.0606625595026344 0.24799924419610553 0.062080736880426084 466.59369900825556 351599.43420910067 0.010843874201888095 0.013110261606301419 5.085549024114301e-09 8.293662154782103 0.08420072649686061 KFPVFNPATEEELCQVEEGDKEDVDK ddPTM_A549_PD325901_60min_R1 2 KFPVFNPATEEELCQVEEGDKEDVDK 26 2 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 332.64 1.6188999999999994e-232 99955000.0 17581.1 18626.0 20923.7 16835.0 20058.0 18780.8 19924.1 19612.1 15010.0 19840.1 20150.2 False True 19365.920329478242 20195.678387952696 22343.708106429414 17874.859714940943 18649.19527634347 18627.855391554385 20682.322528385874 19220.92128010519 14379.18189868105 18587.392700067343 17671.853142642045 1.0958624527468728 1.1428161056420665 1.2643670092817951 1.011487565602786 1.0553050167298588 1.0540974532323106 1.1703539159953513 1.087657368186546 0.8136770820024639 1.0518077843922382 1.0 14.109165714261659 -8.658992246941706 7.043679497084001 0.9122612581763075 1.1128965167354488 0.36728306370991026 0.08610992704893335 0.13277681121312818 8.107592393912368 0.01538906939128196 0.017438752145424823 2.192844081821224e-09 8.658992246941706 0.20063525855914122 KFQEQECPPS(ph)PEPTR ddPTM_A549_MK2206_60min_R1 1 KFQEQECPPSPEPTR 15 1 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(1)PEPTR 83.936 8.351200000000001e-05 21197000.0 3328.6 3498.1 3369.5 3019.0 4808.8 3933.9 3898.5 4037.9 4629.6 4617.1 4557.1 True False 3890.386303543276 3676.138348406852 3847.345766791778 3758.6551355280603 4101.43189017884 4350.182686888522 4606.806986998628 4610.284690550124 3581.002991952041 3574.093903284786 3425.4463004383297 1.1357312193291285 1.0731852220063829 1.1231662765518935 1.0972745755924103 1.1973423403700736 1.2699608475344835 1.3448778882941848 1.345893143897827 1.045412094620723 1.0433951052823205 1.0 11.742076253313975 -8.934434101354297 11.672302840949897 1.020005832227177 1.1957080689619262 0.42419636855330134 0.08781804885406033 0.4612293005519501 80.65124295469231 0.017217435411007485 0.018308770840046708 1.1629630024112205e-09 8.934434101354297 0.17570223673474916 KFQEQECPPS(ph)PEPTR ddPTM_A549_PD325901_60min_R1 2 KFQEQECPPSPEPTR 15 1 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(0.999)PEPT(0.001)R;KFQEQECPPS(1)PEPTR 135.43 5.6788e-10 198582000.0 55744.0 59290.0 60752.0 48158.0 55919.0 44024.0 56802.0 57264.0 40622.0 52193.0 47507.0 True False 61403.08984343613 64286.57637827312 64874.996051453585 51132.61028524651 51991.44235007731 43665.483140110686 58963.631193247056 56121.824597261024 38914.79860681025 48897.525072686876 41663.9401716854 1.4737705937175227 1.5429787992534119 1.557101795560428 1.227262953876743 1.2478762722833026 1.0480401747932984 1.415219754787341 1.3470119332448813 0.9340162847405524 1.173617398431207 1.0 15.346511661495255 -6.900640163503489 0.3296923680723018 0.9417401187812251 1.6797194638470356 0.44724383428783454 0.15403064758757196 1.2262287923590045 0.20169906753103953 0.06668258135249425 0.3244391900299839 1.25707108378994e-07 6.900640163503489 0.7379793450658105 KFQEQECPPS(ph)PEPTRK ddPTM_A549_MK2206_60min_R1 3 KFQEQECPPSPEPTRK 16 2 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(1)PEPTRK;KFQEQECPPS(1)PEPTRK;KFQEQECPPS(0.999)PEPT(0.001)RK 140.97 6.972100000000001e-15 243426400.0 6594.7 6763.000000000001 5959.78 6037.9 8348.9 6147.799999999999 6792.799999999999 6097.7 8736.2 8408.0 9328.3 True False 7707.724135064839 7107.207812891441 6804.966420540226 7517.185771051632 7120.787869720956 6798.356115420635 8026.963832572601 6962.067648423064 6757.4646488447 6508.626960390388 7011.825662017263 1.0992464026618953 1.0136030408443921 0.9704985190094523 1.0720725433565585 1.0155397770788763 0.9695557823473874 1.1447751583520245 0.9929037006918561 0.963723996369387 0.9282357083758258 1.0 12.775574410869366 -8.497580346511276 24.991269506132465 0.9826298754518307 1.0369579337241894 0.28003298140691457 0.05250057512354915 864.310444740616 853819.4489046835 0.007867304151036316 0.009490913176149363 3.1799453291413043e-09 8.497580346511276 0.05432805827235876 KFQEQECPPS(ph)PEPTRK ddPTM_A549_PD325901_60min_R1 4 KFQEQECPPSPEPTRK 16 2 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(1)PEPTRK;KFQEQECPPS(1)PEPTRK;KFQEQECPPS(1)PEPTRK;KFQEQECPPS(1)PEPTRK 135.73 4.5060000000000004e-11 322012900.0 9958.3 10068.4 11962.6 10358.400000000001 9613.4 10659.7 10848.3 11156.800000000001 8063.700000000001 9945.800000000001 11620.7 True False 10969.259285086999 10916.899403052868 12774.45397295758 10998.214842366746 8938.187948429573 10572.890937412269 11261.13799291754 10934.268871659722 7724.810731272111 9317.820490639157 10191.427569686673 1.0763221550741235 1.0711845154572883 1.2534508915074711 1.0791633230147046 0.8770300222723724 1.0374298266967248 1.1049617843934452 1.0728888369066716 0.7579714106244297 0.9142802052927336 1.0 13.315068531490333 -8.732288792153573 24.69355976306358 0.8857087291034957 1.0713505632000675 0.40774890392242447 0.09699350700525816 151.90803451200762 128681.69075668343 0.020176167035055106 0.0228757492269097 1.8522994929664193e-09 8.732288792153573 0.18564183409657176 KFS(ph)AGGDSDPPLKR ddPTM_A549_PD325901_60min_R1 1 KFSAGGDSDPPLKR 14 2 O75152;E9PBY7;E9PQ61 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 KFS(0.792)AGGDS(0.208)DPPLKR 46.891999999999996 0.0067202 4343300.0 2981.2 2706.0 3117.6 2863.7 3760.5 4096.0 3656.9 3859.1 4397.0 4104.1 4471.1 True False 3283.849229356555 2934.0441167078243 3329.17908365176 3040.584245065419 3496.375453020722 4062.6435340244716 3796.0653306324607 3782.1272230946165 4212.209380979384 3844.966425589912 3921.183044638108 0.8374638959655163 0.7482548208811333 0.8490241454563401 0.7754252251047462 0.8916634120923594 1.0360759719135781 0.9680918456033988 0.9645372786833711 1.0742190132488791 0.9805628510119118 1.0 11.937073274496152 -7.075356437919827 2.804115990055896 1.0248353787803905 0.8019640998103394 0.8276480718428969 0.04238735511610368 0.07604335706177391 1.1731568335144333 0.006693066570794944 0.012607422274807645 8.407048678567224e-08 7.075356437919827 -0.2228712789700511 KFS(ph)APR ddPTM_A549_PD325901_60min_R1 2 KFSAPR 6 1 P39023;H7C422;H7C3M2;F8WCR1;Q92901 P39023 RPL3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like 1 KFS(1)APR;KFS(1)APR 52.716 0.037203 15632100.0 4201.0 4336.6 3907.0 3806.5 4493.6 3721.5 3541.9 3998.0 4118.2 4186.8 4310.799999999999 True False 4627.482427387257 4702.060501299027 4172.152514699585 4041.618859811269 4177.985038078424 3691.193337859394 3676.6889427020506 3918.2567536296738 3945.126375426271 3922.444733476242 3780.598928412684 1.2240077604132804 1.2437342839943157 1.1035691946437962 1.0690419524369321 1.1051119458028797 0.9763514743969872 0.9725149407069581 1.036411644774704 1.0435188842109377 1.0375194004308501 1.0 11.884399091225754 -5.962059307050091 0.9504494958563404 1.0176902106095056 1.2727567488110152 0.8295431117872143 0.03568171934830619 0.25530544560297985 0.31866055078850214 0.005626888936484058 0.051824862369357995 1.0912913000463912e-06 5.962059307050091 0.2550665382015096 KFS(ph)FKK ddPTM_A549_PD325901_60min_R1 1 KFSFKK 6 2 P49006 P49006 MARCKSL1 MARCKS-related protein 1 KFS(1)FKK 40.431999999999995 0.032715 9399300.0 3150.2 4035.6 4024.6 3370.3 4051.5 2931.8 3480.9 4014.9 3094.0 4021.3 4359.6 True False 3470.005984945331 4375.69417493943 4297.733557885833 3578.4757764933424 3766.9366169162226 2907.9243928351934 3613.367554321569 3934.8196698718825 2963.9699396748274 3767.394431720649 3823.3968377813762 0.9075714952358674 1.1444520044847184 1.1240615976393658 0.9359415013195033 0.9852329686766399 0.7605604430333187 0.9450673596357102 1.029142366544186 0.7752190173894549 0.9853527090080391 1.0 11.900639232725554 -6.510785913012204 2.541266888725243 0.9005327221750917 1.065349003939619 0.21644363252583287 0.10197059850681403 0.28069600493896 3.605799640375432 0.016060715812790984 0.04012561097627102 3.0847081932350254e-07 6.510785913012204 0.16481628176452723 KFS(ph)LGDFGDLK ddPTM_A549_MK2206_60min_R1 1 KFSLGDFGDLK 11 1 P51841 P51841 GUCY2F Retinal guanylyl cyclase 2 1 KFS(1)LGDFGDLK 40.552 0.021765 10585000.0 1180.4 1328.6 1491.4 998.9 2506.3 1929.4 2316.8 2066.5 2866.7 2772.7 2877.2 True False 1379.6226619907718 1396.2200650905754 1702.9029460137283 1243.6305448423248 2137.6265900755343 2133.567827367934 2737.732570855055 2359.4327033908294 2217.397027179218 2146.345144276217 2162.7118333196927 0.6379133089927638 0.6455876569313549 0.7873924393338281 0.5750329404419044 0.9884010237250825 0.9865243230731191 1.2658794984502046 1.0909602782212444 1.025285474013237 0.9924323301924356 1.0 11.078625733440276 -6.835160994788375 5.893851031286613 1.0360334645515195 0.6699770352177427 0.8147627177565253 0.08903514227926763 0.06859313988090675 4.110164697607224 0.01319311753614222 0.02531846541498168 1.4616352396923024e-07 6.835160994788375 -0.3660564293337768 KFS(ph)NSLK ddPTM_A549_MK2206_60min_R1 2 KFSNSLK 7 1 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 KFS(0.883)NS(0.117)LK;KFS(1)NSLK 102.06 0.0045038000000000005 49212000.0 18783.4 22405.0 20836.4 19174.8 23807.0 18187.6 14393.6 18751.8 21784.1 25260.0 21195.5 True False 21953.57870996058 23545.318800507575 23791.314834598663 23872.626860789478 20305.021836942193 20112.199760048217 17008.7308062238 21409.92507497902 16850.03613205946 19553.748456168094 15932.072383959243 1.3779487175857876 1.4778566298891231 1.4932969334580903 1.4984006025998826 1.2744746162078533 1.262371854417233 1.0675780523912608 1.3438254960814136 1.0576173473216481 1.2273198354192285 1.0 13.95964631895506 -7.682165988749435 0.497000766256812 1.0061687893574447 1.5010915343904527 0.5707043624289144 0.11211899259365465 0.2947554594467134 0.14869715370476286 0.02489167067948761 0.056645868979268474 2.0789019722141203e-08 7.682165988749435 0.49492274503300804 KFS(ph)NSLK ddPTM_A549_PD325901_60min_R1 2 KFSNSLK 7 1 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 KFS(0.984)NS(0.016)LK;KFS(0.614)NS(0.386)LK 90.10799999999999 0.0052581 105279000.0 30973.0 32570.0 30638.0 31696.0 40074.0 35675.0 36381.0 34063.0 35688.0 34585.0 34989.0 True False 34117.35615888252 35314.78820442495 32717.278921260764 33653.78993316114 37259.340487794834 35384.47462800855 37765.49886344708 33383.58674309346 34188.15746836305 32401.297197686956 30685.57481354539 1.1118369581208645 1.1508595950705838 1.0662103975584818 1.0967299826596537 1.214229836468555 1.1531305782282086 1.2307248305733687 1.0879244383050337 1.1141442738518144 1.055912994772521 1.0 14.905272988375504 -10.150956836953828 0.6609450671029168 1.0004983867257828 1.14078679882548 0.40815983925120725 0.04981800117509581 0.4489708247527423 0.3736606464042833 0.03162460915654025 0.010767918904490434 7.06387756242305e-11 10.150956836953828 0.14028841209969722 KFS(ph)PSQVPVQTR ddPTM_A549_MK2206_60min_R1 1 KFSPSQVPVQTR 12 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 KFS(0.759)PS(0.21)QVPVQT(0.031)R 61.126999999999995 0.003482 5885700.0 2623.3 2823.9 3162.2 2969.6 4144.9 3235.2 3098.6 2918.0 5057.1 3891.7 4621.2 True False 3066.048906472714 2967.624448147883 3610.647509645038 3697.1521333104083 3535.1907007158297 3577.5467166480466 3661.57551107194 3331.6354360002133 3911.674924529259 3012.562267096967 3473.6285013683296 0.8826645984925958 0.8543298303140011 1.03944549862564 1.0643487442177622 1.0177227355554141 1.029916329635936 1.054106825076307 0.9591225528831934 1.1261062957620178 0.8672666826375532 1.0 11.762227753191524 -5.770068245937322 12.958996264211116 1.0481593243400675 0.8684736653132066 0.35352338309106734 0.06814337842910415 0.22412520707639544 337.46198955591154 0.007076218712594336 0.023158408591440843 1.6979768078921596e-06 5.770068245937322 -0.17968565902686096 KFS(ph)PSQVPVQTR ddPTM_A549_PD325901_60min_R1 1 KFSPSQVPVQTR 12 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 KFS(0.5)PS(0.5)QVPVQTR 79.837 0.00036369 7736400.0 2803.4 2804.1 3374.7 3190.5 3765.7 3976.1 3072.6 3651.8 3778.9 2875.9 3757.7 True False 3087.999104245997 3040.4113479898065 3603.727435719655 3387.5699388487706 3501.210222959748 3943.719959871751 3189.529474391235 3578.9619842183197 3620.085974478733 2694.3151831958367 3295.5267220229084 0.9370274814068192 0.922587375083852 1.093520926908935 1.0279297437374026 1.0624129367734527 1.1966888126007849 0.9678360224108247 1.0860060579394812 1.0984847885732205 0.8175673907271408 1.0 11.686293353391628 -5.7532694037547945 24.997321674882404 1.0569463883762042 0.9298073603256468 0.15136809200121182 0.09189792496523011 131.7219788257723 403014.0140448398 0.00809062701905916 0.03028854554210268 1.7649426428700484e-06 5.7532694037547945 -0.12713902805055743 KFSEAFETT(ph)LGK ddPTM_A549_PD325901_60min_R1 1 KFSEAFETTLGK 12 1 A0A0A0MSD0;Q4LDE5-2;Q4LDE5-4;Q4LDE5 A0A0A0MSD0 SVEP1 Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 1 KFS(0.004)EAFET(0.115)T(0.881)LGK 46.408 0.030930000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KFSFYGNLS(ph)PR ddPTM_A549_PD325901_60min_R1 1 KFSFYGNLSPR 11 1 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 KFS(0.001)FY(0.001)GNLS(0.999)PR 43.791000000000004 0.026462 3603400.0 1742.7 1637.9 2068.0 2114.0 2437.7 1949.6 1951.9 2158.8 3054.0 2546.4 3174.6 True False 1919.6176210920673 1775.9315812105501 2208.3469158942253 2244.5769787576546 2266.4843616084595 1933.723103987819 2026.1806226206625 2115.7410404541633 2925.6510005710807 2385.6198694286563 2784.14432544746 0.6894820802019852 0.6378733907500027 0.7931869392364586 0.806199936634719 0.814068559913537 0.6945484421598858 0.727757036192806 0.7599250588829038 1.050825912230997 0.856859268258389 1.0 11.443018284717407 -8.743551046967449 8.46372872227755 1.0240566149240535 0.7411261492467665 0.6466392096891056 0.07231424994035157 0.04853718528699658 18.169477349826064 0.009596041667528518 0.010734153986577078 1.804882578789703e-09 8.743551046967449 -0.2829304656772871 KFSGFSAKPNNSGEAPS(ph)SPTPK ddPTM_A549_MK2206_60min_R1 1 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 KFSGFSAKPNNSGEAPS(0.5)S(0.5)PTPK 128.27 2.4478000000000003e-22 220030000.0 3703.5 3804.5 3533.6 3321.1 4814.9 3438.6 3698.0 3168.6 4954.8 4870.8 4582.4 True False 4328.560258118284 3998.132799666641 4034.717614344987 4134.769649089842 4106.634588259462 3802.4703696420543 4369.878732312667 3617.7587534305253 3832.5457111897294 3770.4828970824824 3444.4636121938547 1.256671791449505 1.160741772830093 1.1713631115339862 1.2004103148171497 1.1922421168049027 1.103936867319721 1.2686674107523508 1.0503112126437286 1.1126683695022972 1.0946502334164532 1.0 11.75006362193764 -9.840952799749983 0.2333209939119579 0.9321586208205899 1.2271818430088224 0.4511169080023286 0.058779623202291444 1.5314391357630917 0.18547526628180344 0.14687050277233876 0.055320210151374324 1.4422720928767161e-10 9.840952799749983 0.2950232221882325 KFSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_A549_MK2206_60min_R1 5 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 KFSGFSAKPNNSGEAPS(0.014)S(0.986)PTPK;KFSGFSAKPNNS(0.009)GEAPS(0.159)S(0.827)PT(0.005)PK;KFS(0.001)GFS(0.001)AKPNNS(0.005)GEAPS(0.235)S(0.703)PT(0.054)PK;KFSGFSAKPNNSGEAPS(0.033)S(0.962)PT(0.005)PK;KFS(0.015)GFS(0.015)AKPNNS(0.045)GEAPS(0.16)S(0.678)PT(0.087)PK 144.4 1.5304999999999999e-27 267496700.0 9217.000000000002 9312.26 9581.11 8659.43 10750.9 8813.720000000001 9109.789999999999 9344.220000000001 13396.6 13249.6 13802.3 True False 10772.604265985214 9786.214258121612 10939.855468071337 10780.990738736582 9169.456851631112 9746.38200032617 10764.920923968262 10668.791800473582 10362.291489974237 10256.506157753161 10374.807985898922 1.0383425197485063 0.943267024452182 1.054463415895543 1.0391508694319673 0.883819427221585 0.9394276996329101 1.0376019429563967 1.0283363137876125 0.9987935684263558 0.9885972031186936 1.0 13.340797015251916 -7.778723652511918 24.997751992040325 1.0046462493468236 0.9825506002343298 0.06643172138806364 0.04917420384014867 702.3717504586842 1015816.8737019197 0.007722262028550655 0.010682745952240157 1.6644714392980743e-08 7.778723652511918 -0.02209564911249373 KFSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_A549_PD325901_60min_R1 6 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 KFSGFSAKPNNSGEAPS(0.006)S(0.993)PT(0.001)PK;KFSGFSAKPNNSGEAPS(0.206)S(0.791)PT(0.002)PK;KFSGFSAKPNNSGEAPSS(0.999)PTPK;KFSGFSAKPNNSGEAPS(0.108)S(0.889)PT(0.004)PK;KFSGFSAKPNNSGEAPS(0.05)S(0.918)PT(0.032)PK;KFSGFSAKPNNS(0.001)GEAPS(0.149)S(0.827)PT(0.023)PK 178.02 3.8177999999999996e-41 1148371900.0 25126.7 25752.500000000004 27390.3 28198.2 30700.2 29177.4 31492.8 31315.600000000002 29783.2 30125.8 31247.7 True False 27677.544086701106 27922.753553406612 29249.170469254168 29939.938771241297 28543.923861940362 28939.788928136146 32691.2757375214 30690.98579138704 28531.515677867927 28223.651846698816 27404.430995490635 1.0099660194096134 1.0189138230237755 1.0673153722500965 1.0925218179559313 1.0415806066777022 1.0560259008077253 1.1929193400476261 1.1199278611709618 1.041127826465828 1.0298937369414085 1.0 14.742121559537736 -9.253914591667323 2.0875605275507008 1.0136563788180424 1.0750162306224047 0.17579629922385964 0.048789646234222106 0.32996535235743085 2.9645063749400116 0.010779695663013959 0.00982355929373861 5.572953358308073e-10 9.253914591667323 0.06135985180436232 KFSGFSAKPNNSGEAPSSPTPK ddPTM_A549_MK2206_60min_R1 2 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 0 ; 166.69 3.2251e-34 106067000.0 5797.4 6435.9 6242.6 5422.6 7206.4 5596.5 5597.799999999999 6090.5 7743.7 8181.7 7730.5 False True 6775.859387178325 6763.459820048499 7127.894549272695 6751.137243429763 6146.348106260358 6188.717915343962 6614.847800903146 6953.847026373988 5989.7643141478775 6333.448287562568 5810.803499053901 1.166079594376501 1.1639457126969974 1.2266624659452414 1.1618250805639814 1.057744958551961 1.0650365162669142 1.1383705888488842 1.1967100638502395 1.0307979464669756 1.0899436349196394 1.0 12.504521953274892 -8.328356602681865 0.29392083466138796 0.9774252430272834 1.2015941503490508 0.28401957656743015 0.05901744738734724 0.8193161402822157 0.2145870837546054 0.04901777201611188 0.06466870448301182 4.695084331466537e-09 8.328356602681865 0.22416890732176742 KFSGFSAKPNNSGEAPSSPTPK ddPTM_A549_PD325901_60min_R1 2 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 0 ; 182.17 9.027799999999998e-50 83362000.0 7722.6 7773.200000000001 8805.1 8799.1 9784.7 8933.3 9247.5 10055.0 8838.1 8792.2 10462.0 False True 8506.592666922354 8428.274844047774 9402.667035367627 9342.600422793988 9097.4564273825 8860.550166626172 9599.418672926166 9854.445137005092 8466.66539232065 8237.058991513759 9175.240324082191 0.927124780001147 0.9185890010887385 1.0247870032012687 1.018240404915883 0.9915224131518896 0.9657022436098971 1.0462307616870412 1.0740258335403157 0.922773147434433 0.8977485821155012 1.0 13.16353023115427 -5.738034851642025 24.895327244049348 0.9844527388476009 0.922856814716552 0.21817885996476427 0.04918427105854342 288.3178377859306 306677.82684489153 0.006835949454288776 0.026441511800274133 1.8279535190498197e-06 5.738034851642025 -0.06159592413104886 KFSKEEPVS(ph)S(ph)GPEEAVGK ddPTM_A549_PD325901_60min_R1 1 KFSKEEPVSSGPEEAVGK 18 2 O00567 O00567 NOP56 Nucleolar protein 56 2 KFS(0.002)KEEPVS(0.998)S(0.999)GPEEAVGK 65.71600000000001 0.0010077 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KFSKEEPVS(ph)SGPEEAVGK ddPTM_A549_MK2206_60min_R1 1 KFSKEEPVSSGPEEAVGK 18 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KFSKEEPVS(0.5)S(0.5)GPEEAVGK 111.49 6.0962e-10 19303000.0 3340.2 3623.2 3237.4 3021.2 3890.0 2613.5 2719.5 3764.6 3999.5 3856.6 4625.7 True False 3903.9440999505064 3807.605404061551 3696.512000418963 3761.3941356268206 3317.7861530518408 2890.058835299107 3213.5979482218236 4298.243578603976 3093.6196358891034 2985.3913814749753 3477.011027174649 1.1227873795737642 1.0950800484390573 1.0631292140084687 1.081789533087347 0.9542063936874565 0.8311905866020541 0.9242415175292471 1.236189228337491 0.8897353536445117 0.8586085457142901 1.0 11.763631927173401 -6.748964835618464 7.2980705430905495 0.9584884721182811 1.0895106720839955 0.2894049104787987 0.10127266241787246 0.15416054452707925 41.45919925821351 0.014356430601680983 0.029110871484485854 1.782523090682936e-07 6.748964835618464 0.1310221999657144 KFSKEEPVS(ph)SGPEEAVGK ddPTM_A549_PD325901_60min_R1 2 KFSKEEPVSSGPEEAVGK 18 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KFSKEEPVS(0.875)S(0.125)GPEEAVGK;KFSKEEPVS(0.5)S(0.5)GPEEAVGK 111.83 5.4562e-10 97487000.0 6258.3 4765.1 4593.1 4982.299999999999 6081.1 5660.3 5433.200000000001 5701.200000000001 4924.5 5633.1 5705.700000000001 True False 6893.638008883042 5166.671700119901 4904.81538655405 5290.045355375721 5653.9845146561165 5614.204393466486 5639.963399161121 5587.4850934951255 4717.54039041005 5277.425104649137 5003.935071412326 1.3776433767629523 1.0325217306749834 0.9801916524807545 1.0571770576316935 1.1299076494732212 1.1219578818159837 1.1271056316023063 1.116618224208512 0.9427661076902338 1.054654992387745 1.0 12.288847354589647 -8.755545318678587 24.954952833120053 0.9729728818949018 1.1092743871733992 0.20878081593854392 0.09842521292046488 124.00284288684021 525016.6536414014 0.01579727522761055 0.017680806567474217 1.7557176753007251e-09 8.755545318678587 0.13630150527849738 KFSKEEPVSS(ph)GPEEAVGK ddPTM_A549_MK2206_60min_R1 3 KFSKEEPVSSGPEEAVGK 18 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KFSKEEPVS(0.148)S(0.852)GPEEAVGK;KFSKEEPVS(0.108)S(0.892)GPEEAVGK;KFSKEEPVS(0.104)S(0.896)GPEEAVGK 158.89 2.2619e-23 351509000.0 18695.0 19531.800000000003 18409.3 16785.9 24029.899999999998 17538.399999999998 17395.9 15568.800000000001 26807.0 27513.8 32236.7 True False 21850.258951133073 20525.885192937018 21020.01555856948 20898.44625354768 20495.133542216045 19394.301846952287 20556.50985382314 17775.725077450355 20735.257301982532 21298.413470836007 24231.437702341478 0.9017318418965165 0.8470766549255807 0.8674687741098549 0.8624517665960971 0.8458075741925789 0.8003776781712882 0.8483404949528343 0.7335811145754959 0.8557171702601406 0.8789578948003546 1.0 14.56459238501988 -10.307458622886324 0.8724284531620489 0.9933090130402797 0.8396114686950543 0.2545421471859851 0.053217724866209966 0.2572228264770623 0.37648500523485373 0.02241940052398105 0.00831837813787167 4.926532783223133e-11 10.307458622886324 -0.15369754434522542 KFSKEEPVSS(ph)GPEEAVGK ddPTM_A549_PD325901_60min_R1 2 KFSKEEPVSSGPEEAVGK 18 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KFSKEEPVS(0.164)S(0.836)GPEEAVGK;KFSKEEPVS(0.1)S(0.9)GPEEAVGK 174.63 3.5756e-31 573510000.0 22454.0 21563.0 22942.0 22305.0 26294.0 26600.0 24768.0 27374.0 28329.0 27232.0 28418.0 True False 24733.51355023887 23380.189685355093 24498.982081453247 23682.729191669587 24447.200149375585 26383.37841920189 25710.559793569642 26828.004095512417 27138.4306467512 25512.566872557814 24922.766156544418 0.9924064365441292 0.9381057278513901 0.9829961059527138 0.9502448100228549 0.9809184099316377 1.0586055437620006 1.031609398093171 1.0764456853224418 1.0889012269460698 1.0236651386250126 1.0 14.605176580289271 -7.168412722086648 4.458522165809402 1.045989544375491 0.9653357293462468 0.6784817749796797 0.026685297960365322 0.13768567622673614 4.7696438588718735 0.005264859833565356 0.00926983241147578 6.785584731796914e-08 7.168412722086648 -0.08065381502924418 KFTNFQSPNIDPTEENDLDDS(ph)LSVK ddPTM_A549_MK2206_60min_R1 1 KFTNFQSPNIDPTEENDLDDSLSVK 25 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 KFTNFQSPNIDPT(0.009)EENDLDDS(0.556)LS(0.435)VK 51.29600000000001 0.01732 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KFTNFQSPNIDPTEENDLDDS(ph)LSVK ddPTM_A549_PD325901_60min_R1 2 KFTNFQSPNIDPTEENDLDDSLSVK 25 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 KFTNFQSPNIDPT(0.003)EENDLDDS(0.969)LS(0.028)VK;KFTNFQSPNIDPT(0.002)EENDLDDS(0.584)LS(0.414)VK 83.088 8.6537e-07 2682600.0 672.72 1132.8 864.97 643.54 970.59 977.79 860.58 966.57 1402.2 1121.3 693.27 True False 741.0140391697107 1228.2650315619458 923.6720656871506 683.2900042146175 902.4191067537249 969.8272024252412 893.3298428274454 947.2910030905038 1343.2704102818502 1050.5009266377447 608.0021850006179 1.2187687107883627 2.0201654893077357 1.5191920168612747 1.123828205015288 1.4842366179207198 1.5951047978951844 1.4692872243979476 1.5580388137742318 2.2093183929601916 1.727791367454834 1.0 9.247932698121039 -11.182791504249424 1.6100315108254137 1.0011263065019058 1.666129467916927 0.0 0.3705538255414995 0.3699534077465505 1.728091354653452 0.2563973046926587 0.05434635779088769 6.564603436271631e-12 11.182791504249424 0.6650031614150211 KFTRDT(ph)PLGK ddPTM_A549_MK2206_60min_R1 2 KFTRDTPLGK 10 2 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 KFT(0.099)RDT(0.901)PLGK;KFT(0.023)RDT(0.977)PLGK 57.802 0.0043058 22585700.0 4551.1 5185.3 5668.1 5198.6 6748.799999999999 5884.8 5061.2 4989.0 7377.4 7966.700000000001 7927.5 True False 5319.21441628787 5449.20962179299 6471.921810580937 6472.2572333740245 5756.060460081299 6507.525629985912 5980.754526766058 5696.206028171713 5706.430679286977 6167.016936886553 5958.882962130495 0.8926529435285431 0.9144683083093681 1.086096480113953 1.0861527696560065 0.965962999552406 1.0920713951494123 1.0036704135279313 0.95591842705619 0.9576342941373599 1.034928354203091 1.0 12.540826196551947 -5.552816249143931 23.748356989797934 0.9985706077842883 0.8981067246993724 0.37826835437397377 0.05223351213425766 85.72980865876333 68006.2769813721 0.007484698270824083 0.028989238056562023 2.8001658247438648e-06 5.552816249143931 -0.10046388308491594 KFTYLGS(ph)QDR ddPTM_A549_MK2206_60min_R1 2 KFTYLGSQDR 10 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KFT(0.001)YLGS(0.999)QDR;KFTYLGS(1)QDR 86.46700000000001 0.00031830000000000004 14571500.0 4927.1 5068.0 5919.8 5981.700000000001 7416.9 5507.1 5217.8 5160.9 8324.9 8420.7 8041.5 True False 5758.674023970462 5325.9395528217965 6759.316655365474 7447.216768528722 6325.883835108019 6089.857666682878 6165.806719702823 5892.473379593383 6439.323442133565 6518.4580215698625 6044.573615890553 0.9527014459434342 0.8811108758474638 1.118245402388009 1.232049974368873 1.0465392990628704 1.0074916865390269 1.0200565187085424 0.9748368957080257 1.0653064800477003 1.078398318192952 1.0 12.561424860044548 -11.123238592985688 1.4663511058806264 0.9999233209604397 1.0387529492063614 0.0 0.08943379900664944 1.7677940919717021 6.78118600755484 0.06679135993672083 0.014287752000301223 7.529417984305546e-12 11.123238592985688 0.03882962824592173 KFTYLGS(ph)QDR ddPTM_A549_PD325901_60min_R1 2 KFTYLGSQDR 10 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KFTYLGS(1)QDR;KFTYLGS(1)QDR 102.28 0.00016849 30711000.0 8960.3 9739.8 9950.9 8966.9 11558.599999999999 12434.8 11042.7 12062.2 13628.5 11443.2 11529.8 True False 9869.943059775771 10560.607127831066 10626.227913622752 9520.765047692532 10746.763811005267 12333.535111544805 11462.935991297301 11821.609958387156 13055.741539385386 10720.674399091266 10111.7076934241 0.9760906227732874 1.0443940279937975 1.0508836129166648 0.9415585711485833 1.062804042287947 1.219728208674942 1.1336300789976297 1.1691012355979247 1.291151003887886 1.060223923013834 1.0 13.303739043732607 -7.022884448234654 8.756628401265639 1.1479179040515377 1.008587696841782 0.43231619028985513 0.07658447261519988 0.2902236340201084 103.21786945646241 0.015784157623654413 0.027991633964569544 9.486708404619131e-08 7.022884448234654 -0.13933020720975575 KFVADGIFK ddPTM_A549_MK2206_60min_R1 1 KFVADGIFK 9 1 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;E9PQ96;E9PJH4;E9PK82;E9PQX2 P23396 RPS3 40S ribosomal protein S3 0 70.977 0.0033459 2336300.0 889.89 1101.1 1168.9 985.53 1682.7 1307.3 1177.5 913.85 1966.0 1565.8 1230.7 False True 1040.0816762783527 1157.141286821641 1334.6675966175726 1226.9848942421233 1435.177059059212 1445.6376182844926 1391.4365081931226 1043.3910360482498 1520.7041390568756 1212.0846925046715 925.0832244079467 1.124311466078098 1.2508510113370734 1.4427540802847874 1.3263508210597958 1.551403183186816 1.5627108784830692 1.5041203553157523 1.1278888304520063 1.6438565730452268 1.3102439440304474 1.0 9.853439352203216 -11.032116569367913 1.315530115450886 0.9992471706538885 1.421593971020452 0.11012637853960017 0.1885061189150423 0.3388564813647976 1.041884741546087 0.12727168955560259 0.028373931385841423 9.287170755467647e-12 11.032116569367913 0.42234680036656347 KFVADGIFK ddPTM_A549_PD325901_60min_R1 2 KFVADGIFK 9 1 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;E9PQ96;E9PJH4;E9PK82;E9PQX2 P23396 RPS3 40S ribosomal protein S3 0 ; 104.22 0.0006249 6552300.0 4050.1 4305.7 4500.4 4312.2 5083.9 4559.9 5296.3 4585.200000000001 4964.7 4920.5 5074.1 False True 4461.263170473967 4668.556449855464 4805.824207103665 4578.554800283238 4726.824402502872 4522.765686230029 5497.853594746564 4493.744588980185 4756.050924209315 4609.818790262215 4450.017867370048 1.0025270242590205 1.049109596635074 1.0799561598038925 1.0288845880497903 1.0622034660046018 1.0163477588243874 1.2354677573453845 1.009826190121789 1.0687711973210865 1.0359101755666902 1.0 12.119595413351103 -10.645290970058328 0.8728443807401582 0.9992989851773344 1.063146649957649 0.05947042875839825 0.06119928212933128 1.0069475708744975 1.341193355288181 0.041365961403753475 0.010579214073016468 2.2631275418445378e-11 10.645290970058328 0.06384766478031456 KFVDKYSISLS(ph)PPEQQK ddPTM_A549_MK2206_60min_R1 2 KFVDKYSISLSPPEQQK 17 2 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 KFVDKYS(0.006)IS(0.166)LS(0.828)PPEQQK;KFVDKYS(0.002)IS(0.092)LS(0.906)PPEQQK 100.92 3.5439999999999998e-09 7917900.0 4048.5 4421.4 4568.4 4403.8 6998.5 4627.799999999999 4588.1 4154.0 7166.2 6310.700000000001 6232.0 True False 4731.787823678106 4646.430374673696 5216.267814515971 5482.731197694097 5969.0299208568895 5117.510724314981 5421.69838067165 4742.842221091459 5543.06714206988 4885.108487028503 4684.42240554995 1.0101112611177077 0.9918897085729839 1.1135348956438915 1.1704177640339046 1.2742296496970424 1.0924528749268902 1.1573888755736885 1.0124710819144522 1.1832978886580843 1.0428411582270607 1.0 12.193655457622414 -5.762538183573548 24.970215726178854 1.10779679819206 1.0010004564944566 0.24467312566363209 0.07695442745987269 35.05503282139019 796724.4069983274 0.012343478337601358 0.041821180904341795 1.727674075123463e-06 5.762538183573548 -0.10679634169760344 KFVDKYSISLS(ph)PPEQQK ddPTM_A549_PD325901_60min_R1 2 KFVDKYSISLSPPEQQK 17 2 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 KFVDKYS(0.002)IS(0.104)LS(0.893)PPEQQK;KFVDKY(0.001)S(0.017)IS(0.176)LS(0.806)PPEQQK 111.66 8.681599999999999e-10 13632900.0 4179.9 3421.0 4002.7 4426.5 4725.5 4704.5 4109.0 5208.6 5213.5 4349.6 4241.3 True False 4604.2403709202545 3709.299676000544 4274.347292190433 4699.914851689102 4393.597182089996 4666.188111772005 4265.370243531074 5104.710386932346 4994.3947254346185 4074.9655136926217 3719.6469878158855 1.2378164879629578 0.9972182005848309 1.1491271365781563 1.2635378752564939 1.1811866009010288 1.254470686884164 1.1467137224319313 1.3723642065102923 1.3427066444192983 1.09552479765973 1.0 11.860949993873458 -4.918110692851984 20.539503823176084 1.1797728770552998 4.028773401321933 0.019519515672651644 0.1171678959680238 2854.1538192045855 732425.1926609426 0.01945498085631006 8706.233346015235 1.2075060270943664e-05 4.918110692851984 2.8490005242666334 KGAANAS(ph)GSSPDAPAK ddPTM_A549_MK2206_60min_R1 1 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.333)GS(0.333)S(0.333)PDAPAK 56.482 0.0083376 1022000.0 252.44 289.97 191.9 175.66 381.71 139.29 184.69 0.0 194.19 409.35 374.19 True False 295.0457004345563 304.72823443799064 219.11430557867408 218.69670788567706 325.5609646481795 154.02957534678106 218.24578233391742 0.0 150.20627505770835 316.87755069407774 281.26829588137616 1.0489831408478072 1.083407689029085 0.7790224095185072 0.7775377143036113 1.1574748004499007 0.5476250882244561 0.7759345277434387 0.0 0.5340320158979357 1.1266024480331749 1.0 8.135803133282465 -5.810758013515429 4.320026447653232 0.7313285613265932 1.0704051923334887 0.14217208334212983 0.30497098526905553 0.2891929443946114 11.168037725183881 0.0432018689187141 0.153853062596208 1.5461156866888752e-06 5.810758013515429 0.33907663100689556 KGAANASGS(ph)SPDAPAK ddPTM_A549_MK2206_60min_R1 1 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.012)GS(0.567)S(0.421)PDAPAK 85.146 3.5399e-05 26456000.0 833.17 1015.9 833.33 949.87 1231.4 1065.5 1164.6 1173.6 1378.7 1420.5 1356.7 True False 973.7887269492136 1067.6049707402656 951.5087246892991 1182.5881926412846 1050.2626912257167 1178.2505027783418 1376.1927451734275 1339.961393999263 1066.4266513314928 1099.6080634199036 1019.7939469848557 0.9548877298481109 1.0468830236703885 0.933040176893136 1.1596344498197404 1.0298773534898356 1.155380953438665 1.349481186118341 1.313953076463163 1.0457275751484036 1.0782649442772514 1.0 9.99406196461034 -6.2528821198973805 24.814209525357015 1.0838708927373837 0.9851315862009009 0.17014251037056605 0.11802074821158165 1163.521646694322 3373952.5208687657 0.019508090551591587 0.05066338206072562 5.586218002990575e-07 6.2528821198973805 -0.09873930653648277 KGAANASGS(ph)SPDAPAKDAR ddPTM_A549_MK2206_60min_R1 1 KGAANASGSSPDAPAKDAR 19 2 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.079)GS(0.46)S(0.46)PDAPAKDAR 65.454 0.00065144 3736600.0 235.54 358.48 405.35 352.31 531.52 506.13 292.99 396.34 418.67 588.9 665.0 True False 275.2933935998867 376.72510080812117 462.8347252022696 438.6259658157968 453.3341121002864 559.6883406580971 346.22249047601105 452.52240874034396 323.8419134786075 455.8670809911874 499.86214693368396 0.5507386292173261 0.7536579897459225 0.9259247335319297 0.8774938620707136 0.9069182671286162 1.1196853854435795 0.6926359449297206 0.9052944127021074 0.6478624466068466 0.9119856020057199 1.0 8.965386469949298 -11.179367257769291 1.601732802015845 0.9996916823556766 0.8052008147812741 0.09363689078558535 0.15081601760720695 0.56291558287239 2.6012216077417922 0.11365110389899923 0.024111168768537895 6.616567421501171e-12 11.179367257769291 -0.19449086757440248 KGAANASGS(ph)SPDAPAKDAR ddPTM_A549_PD325901_60min_R1 1 KGAANASGSSPDAPAKDAR 19 2 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.065)GS(0.467)S(0.467)PDAPAKDAR 60.398 0.00095621 4899800.0 590.66 567.93 423.18 405.18 613.09 501.38 618.28 779.9 361.79 628.26 334.95 True False 650.6233683790894 615.7914542505081 451.89953958806507 430.2070483694544 570.028673445679 497.2969275120092 641.8089837357982 764.3442826802858 346.5852244586152 588.5915563804779 293.7532734229909 2.2148633810872376 2.0962879734919495 1.5383642684973624 1.4645183127882169 1.9405015195349484 1.6929068456572567 2.1848572996550866 2.60199409447828 1.1798514461472869 2.0036936083191614 1.0 8.198461118132542 -8.904845296469132 9.107362605362104 1.0790935666761463 1.9369889939213256 0.1798483271951652 0.41664275981500437 0.14113749708148993 12.27281567581215 0.05662734533370248 0.06018708023021777 1.2449580093005446e-09 8.904845296469132 0.8578954272451793 KGAANASGSS(ph)PDAPAK ddPTM_A549_MK2206_60min_R1 1 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.009)GS(0.247)S(0.744)PDAPAK 91.589 3.9474e-06 25105000.0 1519.4 1311.1 1393.0 746.96 1648.7 1318.3 1243.2 1127.0 1225.0 1994.9 1774.4 True False 1775.8375742365108 1377.829389839119 1590.5483463840178 929.965233532309 1406.1784140196842 1457.801630983284 1469.073347758547 1286.7557012927487 947.5394559230277 1544.250704481779 1333.767509051321 1.3314446199845011 1.033035653132035 1.1925229364114134 0.6972468794008728 1.0542905000136549 1.0929953092201097 1.1014463448757017 0.964752621847858 0.7104232555469816 1.15781100829197 1.0 10.381291494835093 -8.524443716786438 24.943307737135463 0.8619044989873582 1.058758471714718 0.014125248258069378 0.17994820904890207 57.81752758627247 921513.4072737509 0.02874966804182826 0.032718238948216634 2.9892090140454457e-09 8.524443716786438 0.19685397272735983 KGAANASGSS(ph)PDAPAK ddPTM_A549_PD325901_60min_R1 2 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.002)GS(0.068)S(0.93)PDAPAK;KGAANAS(0.007)GS(0.182)S(0.812)PDAPAK 91.589 3.9474e-06 85745000.0 2803.6000000000004 2529.6 2953.0 3328.0 3526.6 2914.8 3348.0 3029.6 2574.6 2806.1 3339.8 True False 3088.2194080987647 2742.778269631972 3153.408337831553 3533.5630015636148 3278.9037821095258 2891.0628351988594 3475.4099720958957 2969.172251324779 2466.3985154126735 2628.922367107979 2929.025772736542 1.0543503702985484 0.9364131566071671 1.0766065519749162 1.206395325863679 1.119452007773253 0.98703905650437 1.1865412740458325 1.013706427222977 0.8420542210211953 0.8975415619685104 1.0 11.516205172326487 -8.528508056560364 22.53193743109453 0.9255442286387866 1.0795195368694461 0.44955035764932405 0.08097034292749306 34.6486388903085 138682.78392254564 0.015433747563775106 0.017537328847550923 2.961365028851515e-09 8.528508056560364 0.15397530823065952 KGAANASGSS(ph)PDAPAKDAR ddPTM_A549_PD325901_60min_R1 3 KGAANASGSSPDAPAKDAR 19 2 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.002)GS(0.107)S(0.89)PDAPAKDAR;KGAANAS(0.009)GS(0.195)S(0.796)PDAPAKDAR;KGAANAS(0.019)GS(0.392)S(0.59)PDAPAKDAR 89.721 1.1370999999999999e-06 33365100.0 3633.05 4138.66 5180.23 4623.44 4883.35 5774.45 4733.34 4993.389999999999 5654.639999999999 5159.91 5975.110000000001 True False 4001.8745614899494 4487.439402828533 5531.791559053549 4909.019388205911 4540.360342642932 5727.424793712795 4913.469843883033 4893.792919211324 5416.995145340291 4834.112402004248 5240.209349343028 0.7636860084591218 0.8563473524948253 1.0556432368006587 0.9367983339866681 0.866446365012528 1.0929763320297212 0.9376476236582114 0.9338926353819939 1.0337363994855333 0.9225036787147267 1.0 12.355408734063332 -4.358414944010631 0.7666673805587855 1.0018027097702513 4.532827193843458e-18 0.40809613752592355 0.07062352884562859 4.8137399234816804 0.7349571158942543 0.01016063287217484 5.746710579380792 4.381119063954608e-05 4.358414944010631 -1.0018027097702513 KGAAPT(ph)PPGK ddPTM_A549_MK2206_60min_R1 4 KGAAPTPPGK 10 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KGAAPT(1)PPGK;KGAAPT(1)PPGK;KGAAPT(1)PPGK;KGAAPT(1)PPGK 62.303000000000004 0.0051452 10493464500.0 18044.41 19893.49 20699.260000000002 18893.05 25778.1 19276.399999999998 17804.45 20441.32 26999.7 27279.7 27994.730000000003 True False 21089.86526453142 20905.983669034118 23634.726320439946 23521.848098141243 21986.175638042565 21316.215853361275 21039.288100466263 23338.939708917034 20884.311059661202 21117.196823425522 21042.865925757604 1.0022335046442645 0.9934950753758339 1.1231705036674575 1.117806299822936 1.0448280056344559 1.0129901472816532 0.9998299744291503 1.1091141193058172 0.9924651486800417 1.0035323561880862 1.0 14.361043584907145 -8.86587081758183 20.6531514462085 0.9964375903780788 1.0501505550179717 0.202854925340481 0.045639622646887555 3.683963798369636 715.1510364489153 0.008170063388249011 0.008697588378239186 1.361849709201227e-09 8.86587081758183 0.053712964639892946 KGAAPT(ph)PPGK ddPTM_A549_PD325901_60min_R1 6 KGAAPTPPGK 10 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KGAAPT(1)PPGK;KGAAPT(1)PPGK;KGAAPT(1)PPGK;KGAAPT(1)PPGK;KGAAPT(1)PPGK;KGAAPT(1)PPGK 70.96300000000001 0.0017649 15377293300.0 32358.5 29609.9 30128.3 29794.6 34817.1 33524.700000000004 32639.100000000002 32659.6 36588.0 36132.0 38700.200000000004 True False 35643.511098931325 32105.230188953105 32172.9876141857 31634.944773553852 32371.667008474356 33251.68595827886 33881.198811300834 32008.178657039465 35050.333598197336 33850.61935367429 33940.32074078053 1.050181916993623 0.9459318441377457 0.9479282137581182 0.9320755986711496 0.953782000344464 0.9797104220740539 0.9982580621458694 0.9430723681576901 1.032704842888626 0.9973570848728467 1.0 15.05071257816447 -8.766265373200467 24.999435372097206 1.015443954438142 0.9670169135720279 0.23433390428964673 0.032607171209657664 103.94562669009227 538454.5268561341 0.005556415171271523 0.006007487778855958 1.7129103234453063e-09 8.766265373200467 -0.048427040866114046 KGAGDGS(ph)DEEVDGK ddPTM_A549_MK2206_60min_R1 12 KGAGDGSDEEVDGK 14 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK 223.06 5.465e-47 4964948200.0 68295.80000000002 71966.7 65859.7 63519.799999999996 85487.59999999999 60253.100000000006 54440.4 64349.600000000006 78056.7 87206.69999999998 89417.59999999999 True False 79822.46136800184 75629.49763537098 75199.59578488699 79082.15385151203 72912.48728473885 66629.04304922913 64331.51599204831 73471.35286238499 60376.98208093635 67506.64590231657 67212.74211978556 1.1876090582012473 1.125225593393961 1.118829457231002 1.1765946657937714 1.084801556746417 0.9913156486084712 0.9571327394647526 1.0931164321706355 0.8982966648397321 1.0043727390560442 1.0 16.036447143065402 -7.1766111611651615 2.1882553265601032 0.9637765998961173 1.1483742737906473 0.6768586245207329 0.05067061065882852 0.13293887873552784 1.2432547699425198 0.008541335272547202 0.016016101372305167 6.658690649425445e-08 7.1766111611651615 0.18459767389452997 KGAGDGS(ph)DEEVDGK ddPTM_A549_PD325901_60min_R1 19 KGAGDGSDEEVDGK 14 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK 195.46 2.764e-31 9815806900.0 182513.3 181631.53999999998 184270.2 175180.10000000003 210081.9 165267.97999999998 185515.78999999998 178185.57 181715.49999999997 186480.5 191949.55000000002 True False 201041.91585680944 196938.26731174497 196775.88387872977 186000.57691412693 195326.47208721007 163922.09236530395 192575.69490658553 174631.51902247488 174078.6294676731 174706.08940503857 168340.97221845065 1.1942542163527714 1.1698772124007015 1.1689126021167329 1.1049037822637733 1.160302625754954 0.9737504197884015 1.1439621167013712 1.0373678892376907 1.0340835458748383 1.0378108615074892 1.0 17.3610268288967 -5.886666746025208 0.2614926604190845 0.9957995468589642 1.3167276021727425 0.6220964613267992 0.0460306933698323 2.5919948640096515 0.17372615305485667 0.02369873542347285 0.2591312084735339 1.2981750378345704e-06 5.886666746025208 0.3209280553137783 KGAGDGS(ph)DEEVDGKADGAEAK ddPTM_A549_MK2206_60min_R1 6 KGAGDGSDEEVDGKADGAEAK 21 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK 193.06 9.2153e-46 1585606000.0 24999.4 27786.5 24262.0 22452.6 40469.6 30397.800000000003 25852.9 32960.4 39679.5 32896.799999999996 33943.1 True False 29218.687543351494 29200.71416426261 27702.71642495982 27953.488007935506 34516.57544975494 33614.475019573416 30550.03728464202 37632.63763699157 30692.15660514106 25465.39003218015 25514.09148809732 1.1451980391691556 1.1444935900572883 1.0857810256690317 1.0956097739547652 1.3528436027540862 1.317486653806781 1.197378997362851 1.474974629394416 1.2029492258997103 0.9980911938040242 1.0 14.639006650354707 -10.29174729704371 0.9985967375511916 1.0156549765371647 1.2228965103069807 0.36515212185612755 0.11280048899369052 0.43968440221191984 0.8605583023060946 0.052849823897019636 0.022171579043896984 5.1080213398873794e-11 10.29174729704371 0.2072415337698159 KGAGDGS(ph)DEEVDGKADGAEAK ddPTM_A549_PD325901_60min_R1 5 KGAGDGSDEEVDGKADGAEAK 21 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK 243.74 5.1296e-87 2447972000.0 67716.2 63658.8 67959.0 58438.3 74554.40000000001 56156.200000000004 66765.8 66055.0 62016.8 62035.5 67257.6 True False 74590.69877396838 69023.55048657798 72571.10641066516 62047.90106799124 69317.9561427173 55698.88252572876 69306.6090546478 64737.481205855 59410.44956523134 58118.567942955306 58985.34158105436 1.2645633097075486 1.1701814151865118 1.2303244240934335 1.0519206874936629 1.1751725816059646 0.9442834614967935 1.1749802102851354 1.0975181201061008 1.0072070106365802 0.985305270515252 1.0 15.848068855112132 -2.000000000001041 0.1957677909506606 0.980151022837127 2.295518547915508 0.5664138085063898 0.06837128986570087 23.27921924870656 0.25591680501761255 0.053305372865914885 9.449273315781616 0.009999999999976032 2.000000000001041 1.315367525078381 KGAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_A549_MK2206_60min_R1 10 KGAGDGSDEEVDGKADGAEAKPAE 24 3 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE 244.87 9.868099999999999e-100 21919377500.0 215293.29999999993 253691.47999999995 233248.62 224963.88999999998 295404.4499999999 222344.72 220498.12999999998 209303.13 351556.48000000004 342779.41 343705.2 True False 251629.5456241757 266603.2927280777 266326.7816492135 280080.0531490126 251950.8467249085 245873.0906899201 260559.78604697532 238972.48964145302 271929.49860033893 265345.30321036105 258353.71305905428 0.9739730180175828 1.0319313377436836 1.0308610567107923 1.0840953274203269 0.9752166661034897 0.9516917244139573 1.0085389637400597 0.9249818274794018 1.0525472824854718 1.0270620850326568 1.0 17.978988092758865 KGAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_A549_PD325901_60min_R1 20 KGAGDGSDEEVDGKADGAEAKPAE 24 3 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE 261.23 1.0247999999999997e-112 53093262400.0 333779.7100000001 362143.03 350544.05000000005 404944.72000000003 407362.93 396097.97000000003 380241.89999999997 407988.48000000004 435383.13000000006 398932.48 407787.20000000007 True False 367664.78044356446 392662.0940791742 374334.07722561463 429957.2356582142 378751.1631226162 392872.2794581831 394712.21358085144 399850.8297056285 417085.4911317188 373743.8151305568 357631.9595760437 1.028053479558746 1.097950235053537 1.0467019716844392 1.2022338164852737 1.059052897765648 1.0985379492479228 1.1036827190969305 1.118051166846591 1.1662422218253494 1.045051498120059 1.0 18.44811614233836 -2.0170262317166547 23.978552500229064 1.0879612272978514 0.005469820376186929 0.0 0.05741058987562753 0.0 0.0 0.008882127872056516 0.0 0.009615541980255484 2.0170262317166547 -1.0824914069216645 KGAGDGSDEEVDGKADGAEAKPAE ddPTM_A549_MK2206_60min_R1 2 KGAGDGSDEEVDGKADGAEAKPAE 24 3 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 146.17 4.5792e-28 121187000.0 9836.9 10697.9 9318.2 7904.1 11889.2 9582.0 10204.5 8827.1 13376.0 14050.0 14759.6 False True 11497.128230885308 11242.377415574647 10639.660876723297 9840.60485482853 10140.314429528005 10595.960879983175 12058.525560812492 10078.368456859993 10346.357357082798 10876.09524185121 11094.383975763012 1.0363016329705317 1.0133394914161025 0.9590132178557087 0.8869897487166922 0.9140042792534238 0.955074288318423 1.0869035709558783 0.9084207360117853 0.9325761015380064 0.9803243934599091 1.0 13.437541942552137 -5.209261883160128 0.0011187880009934429 1.9259646725971464 2.7265435213504396e-05 0.0 0.057823703092121655 4427698.031990829 703.5811349521068 600242.9189530109 610976.035700096 6.176438434825955e-06 5.209261883160128 -1.9259374071619328 KGAGDGSDEEVDGKADGAEAKPAE ddPTM_A549_PD325901_60min_R1 4 KGAGDGSDEEVDGKADGAEAKPAE 24 3 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;;; 143.08 6.3862e-28 239683000.0 22860.5 21449.0 21691.699999999997 22625.4 26644.0 24724.3 25238.3 25831.699999999997 24878.8 24089.8 26421.2 False True 25181.28113098937 23256.58250527205 23163.829204788562 24022.919571988405 24772.617356810046 24522.953498115527 26198.757317427666 25316.46647892338 23833.230554357506 22568.76591680902 23171.559897786316 1.086732237366335 1.0036692655937185 0.9996663714902296 1.0367415779497617 1.0690957995959818 1.058321218178251 1.130642798024597 1.0925663438542166 1.0285552918961836 0.9739856106521823 1.0 14.500067548527717 -9.095284341289855 2.94782231377593 1.0108714115636552 1.0576628364733096 0.3136078781379257 0.03808620942269867 0.27372556601757936 4.9478926768517795 0.007633759357684979 0.0074672494186806045 8.030002097320636e-10 9.095284341289855 0.04679142490965438 KGAILSEEELAAMS(ph)PTAAAVAK ddPTM_A549_MK2206_60min_R1 2 KGAILSEEELAAMSPTAAAVAK 22 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 KGAILSEEELAAMS(0.997)PT(0.003)AAAVAK;KGAILSEEELAAMS(0.997)PT(0.003)AAAVAK 132.24 3.3727e-22 12297600.0 2886.8 3646.1000000000004 3334.2 3348.6 5027.200000000001 3101.5 3759.5 2802.8 5398.3 4809.9 4687.0 True False 3374.0212645162296 3831.6709162477437 3807.0396959896557 4169.007150324365 4287.705539491571 3429.6986713909205 4442.552486243775 3200.105483215008 4175.5936693137 3723.3402493793715 3523.088545380717 0.9576884659739999 1.0875885936138685 1.0805972222813531 1.1833387371970943 1.2170303085664362 0.9734920446117529 1.26098235369889 0.9083238874057858 1.1852082669873605 1.0568398158091183 1.0 11.78262501903977 -5.254402323874114 4.153051936589743 1.0955460610566523 0.9454829199178303 0.1271249325131325 0.10386991027825641 0.38779279105620507 14.531240343619594 0.01399580306656713 0.17397674079140402 5.5666981944848124e-06 5.254402323874114 -0.15006314113882202 KGAILSEEELAAMS(ph)PTAAAVAK ddPTM_A549_PD325901_60min_R1 4 KGAILSEEELAAMSPTAAAVAK 22 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 KGAILSEEELAAMS(0.993)PT(0.007)AAAVAK;KGAILSEEELAAMS(0.977)PT(0.023)AAAVAK;KGAILSEEELAAMS(0.984)PT(0.016)AAAVAK;KGAILSEEELAAMS(0.998)PT(0.002)AAAVAK 149.44 9.3646e-28 46186700.0 7988.199999999999 7721.799999999999 9485.900000000001 9198.4 9990.1 9346.8 9781.6 10023.9 10285.3 10369.2 10305.9 True False 8799.15618339797 8372.54318565946 10129.670217350595 9766.564276917887 9288.429839974024 9270.682759721665 10153.844140696909 9823.965450902573 9853.04460909422 9714.486942381254 9038.33963448276 0.9735367931768945 0.9263364206537255 1.1207445866167973 1.0805706215837287 1.027669927841296 1.0257063946073102 1.1234191844216956 1.0869214754248138 1.0901387873833848 1.0748087962216955 1.0 13.141842054967938 -5.747233865693232 24.99997067883305 1.0560313741444196 0.9499365625848267 0.5511661054897063 0.040202492554914586 167.7689426010331 295247.5176453494 0.006497365459019821 0.024919208506724553 1.7896418801270942e-06 5.747233865693232 -0.10609481155959288 KGCNPLAQT(ph)GR ddPTM_A549_PD325901_60min_R1 1 KGCNPLAQTGR 11 1 Q8IUC4;K7EL35 Q8IUC4 RHPN2 Rhophilin-2 1 KGCNPLAQT(1)GR 65.472 0.0034951 12868000.0 2189.8 1905.5 2528.8 1825.1 2108.6 2596.2 2320.5 2561.2 2167.5 2109.5 2873.3 True False 2412.1068839544437 2066.083172352831 2700.4195749097285 1937.8322818971617 1960.4992102750944 2575.0574079673675 2408.8078973263223 2510.11485677747 2076.4075126842895 1976.3058099904777 2519.902315349394 0.9572223769396377 0.8199060573768157 1.0716366100625234 0.769010873990357 0.7780060355249381 1.0218877899678924 0.9559132045133789 0.996115937307448 0.8240031766455153 0.7842787388829615 1.0 11.299152093033095 -7.269731830125822 24.968135087061857 0.9313716029999842 0.8804388543944981 0.05619312818192279 0.10439724822612516 1594.8489126004088 4802005.257871653 0.015450923886935388 0.02495615665055323 5.3736350729020636e-08 7.269731830125822 -0.05093274860548613 KGDGTQNSANPS(ph)PSGGDSALSGELSASLPGLLSDKR ddPTM_A549_PD325901_60min_R1 1 KGDGTQNSANPSPSGGDSALSGELSASLPGLLSDKR 36 2 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 KGDGT(0.003)QNS(0.009)ANPS(0.537)PS(0.424)GGDS(0.024)ALS(0.002)GELSASLPGLLSDKR 59.187 0.00029368 4431000.0 1226.4 1028.9 1003.8 1211.4 1674.1 1445.0 1345.4 1468.6 1341.2 1412.2 1650.1 True False 1350.9032251720382 1115.609013924864 1071.9239043397597 1286.225426710986 1556.5169913314687 1433.2323990882237 1396.5999332311287 1439.3076209055882 1284.8340281486358 1323.033450992441 1447.1481608457293 0.9334933780260313 0.7709017252752406 0.7407146920694807 0.8888000976757637 1.0755754202954748 0.9903840103356293 0.9650704544411958 0.9945820751791171 0.8878386214427171 0.9142349669430154 1.0 10.498996919023066 -6.521996233640614 24.994539044379543 0.9624508018936224 0.8113121467031007 0.5434951957228635 0.0642888844225501 19.993526883235667 566254.1136819742 0.009762530813998728 0.020526596318842863 3.006102372526107e-07 6.521996233640614 -0.15113865519052172 KGDIVDIK ddPTM_A549_MK2206_60min_R1 2 KGDIVDIK 8 1 P46778;M0R181;G3V1B3 P46778 RPL21 60S ribosomal protein L21 0 ; 95.573 0.0025322 10434700.0 6379.8 6955.4 6983.0 6513.0 9252.3 7625.3 6056.4 6714.5 9778.7 9636.4 9430.0 False True 7456.5542688654095 7309.400151084593 7973.294402584062 8108.6852923796805 7891.2989264476955 8432.20418473551 7156.769484688599 7666.300937293845 7563.840063375117 7459.530547229537 7088.27074524006 1.0519567517751294 1.0311965236363223 1.1248574848722188 1.143958178773695 1.1132897162184285 1.189599619963435 1.0096636742458713 1.0815474200730757 1.0670924313175274 1.0523766395687957 1.0 12.791217995123205 -9.737112016229373 0.5330876262415635 1.0006271809345613 1.099985566133452 0.20089447953072848 0.05017266174373243 0.7328468588654999 0.4413054446287117 0.03138188315070771 0.013568280842671485 1.8318418801358525e-10 9.737112016229373 0.09935838519889084 KGDIVDIK ddPTM_A549_PD325901_60min_R1 2 KGDIVDIK 8 1 P46778;M0R181;G3V1B3 P46778 RPL21 60S ribosomal protein L21 0 ; 96.89 0.0024988000000000002 19117900.0 11256.4 11117.6 12119.8 12506.3 15383.7 13676.0 12645.1 12631.9 13828.599999999999 13752.8 15697.2 False True 12399.141441476291 12054.519169220595 12942.322510277969 13278.78574713192 14303.201982883895 13564.62719026335 13126.316200164234 12379.946844966156 13247.432032251872 12884.445860932476 13766.543912749286 0.9006720582929579 0.8756387402401576 0.9401286620886742 0.9645693088469612 1.0389827740016582 0.9853327949436214 0.9534939403351531 0.8992777652422266 0.9622917789833466 0.9359245096367365 1.0 13.748878796265453 -5.994883126293806 2.7105280988991667 0.9771470635524213 0.887974035791526 0.40747801104683323 0.035098095656148506 0.175363375784373 2.564653738604895 0.005071911910419424 0.018295638278057646 1.0118517187127528e-06 5.994883126293806 -0.08917302776089531 KGDRS(ph)PEPGQTWTR ddPTM_A549_MK2206_60min_R1 10 KGDRSPEPGQTWTR 14 2 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR 181.6 1.2452e-26 6391197000.0 50914.799999999996 48280.8 34220.200000000004 31902.1 64555.3 51944.200000000004 50859.99999999999 50043.700000000004 65681.9 68280.8 72292.70000000001 True False 59507.973492653124 50738.08649602969 39073.13892529098 39718.1159321397 55059.30088588884 57440.90076623066 60100.60365749656 57137.54772740364 50805.05452244135 52856.11985692486 54340.42741298158 1.0950957937890096 0.9337079024135295 0.7190436436640293 0.7309128364097353 1.0132290728492785 1.0570564771175943 1.1060016735006193 1.0514740212321894 0.9349402818702223 0.9726850224276644 1.0 15.729738292627996 -6.80766224175249 24.999831899817234 0.9947450743795141 0.8635017237008116 0.30320200983841994 0.10484802661224145 135.95691578294208 73532.46035762248 0.016158051268054995 0.030535916646056736 1.557176203372906e-07 6.80766224175249 -0.13124335067870252 KGDRS(ph)PEPGQTWTR ddPTM_A549_PD325901_60min_R1 12 KGDRSPEPGQTWTR 14 2 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 KGDRS(0.996)PEPGQT(0.004)WTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(0.999)PEPGQT(0.001)WT(0.001)R;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(0.997)PEPGQT(0.001)WT(0.001)R;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR 206.6 6.728399999999999e-33 7729386500.0 67397.0 60786.799999999996 56857.60000000001 59446.299999999996 54919.30000000001 62461.600000000006 52503.40000000001 52821.899999999994 77261.7 73130.7 92272.40000000001 True False 74239.09382495083 65909.51696729318 60716.298648523996 63118.16293865716 51061.957829299594 61952.93343867747 54501.4456179629 51768.32576652106 74014.65943379917 68513.21512143662 80923.47976293656 0.9173986838236877 0.8144671628107635 0.7502927311874251 0.7799734159178564 0.6309906343484536 0.7655742637386225 0.6734935988618335 0.6397194722492799 0.9146252688419156 0.8466419798326082 1.0 16.3042707376166 -8.915797861342188 5.417068571536313 0.9632166662017883 0.7446202119724868 0.435979847409953 0.08569301476980658 0.10391971248331207 4.948417684748528 0.014600512222409236 0.015388908687190197 1.2139537433954195e-09 8.915797861342188 -0.2185964542293014 KGDS(ph)SAEELK ddPTM_A549_MK2206_60min_R1 1 KGDSSAEELK 10 1 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 1 KGDS(0.622)S(0.378)AEELK 103.75 0.00029243 7100500.0 3852.4 2911.4 3001.8 3053.3 4108.9 3083.1 3318.9 3238.5 4059.5 4755.0 4536.4 True False 4502.590937862799 3059.5778244051658 3427.500377728314 3801.358637067847 3504.4862530269156 3409.351595603853 3921.90116946255 3697.5672924902956 3140.029731689413 3680.8421975090755 3409.886681729269 1.3204517798167366 0.8972667158703204 1.0051654783994501 1.11480497502634 1.0277427316879844 0.9998430780329789 1.1501558660223925 1.0843666190734331 0.9208604346045298 1.0794617361426204 1.0 11.73550808067879 -8.753303649111206 24.997054164852944 0.9626285375745416 1.066479026984862 0.054401947418249996 0.10841148580573472 218.9661738596604 672774.0060511982 0.016424308150099935 0.018466984466863835 1.7648034776044125e-09 8.753303649111206 0.10385048941032049 KGDS(ph)SAEELKLATQLTGPVMPVR ddPTM_A549_PD325901_60min_R1 1 KGDSSAEELKLATQLTGPVMPVR 23 2 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 1 KGDS(0.5)S(0.5)AEELKLATQLTGPVMPVR 72.791 6.3067e-05 3520400.0 2472.5 2529.4 2259.8 3022.9 3096.1 2963.5 2807.7 3551.2 3248.2 2864.5 3033.3 True False 2723.5063798417027 2742.561414930073 2413.16361728132 3209.617667495987 2878.640616965152 2939.3662385452944 2914.548559932394 3480.3685301374917 3111.689449919772 2683.6349811413716 2660.2233296729614 1.0237886231065123 1.0309515687418749 0.9071282062540162 1.2065218854728885 1.082104868736356 1.1049321332380955 1.0956029621357761 1.3082993789718234 1.1697098567669175 1.00880063384426 1.0 11.377331651849772 -6.257171659802362 24.951649640191818 1.1078232219611128 0.9916556828602304 0.30670091524351295 0.08828369455159094 424.9132741333842 2484286.9671212467 0.013723819907250441 0.034970319880358126 5.531314345507783e-07 6.257171659802362 -0.1161675391008824 KGDSS(ph)AEELK ddPTM_A549_MK2206_60min_R1 1 KGDSSAEELK 10 1 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 1 KGDS(0.37)S(0.63)AEELK 117.03 6.148199999999999e-05 8421200.0 3065.4 2886.7 2519.8 2466.3 3476.6 2768.6 2514.3 2927.2 3977.5 3998.7 4148.3 True False 3582.7645781654637 3033.6206999073956 2877.145529948633 3070.5436107164146 2965.1967454241726 3061.5714143520595 2971.1157643736465 3342.139564174029 3076.6026007623223 3095.390892782238 3118.1626227443635 1.1489986288823493 0.9728872630887478 0.9227054127845308 0.9847285027148333 0.9509435857500074 0.9818511042434032 0.9528418250869488 1.071829781999163 0.9866716310179283 0.992697067883495 1.0 11.606480456093788 -11.851049217668614 0.412100260587061 1.0068227449185743 0.9911961261406869 0.0 0.06005800680397401 63.65372385473171 7.183469201043094 0.4906970928299278 0.01551617365126121 1.4091290957735996e-12 11.851049217668614 -0.015626618777887402 KGDSS(ph)AEELK ddPTM_A549_PD325901_60min_R1 2 KGDSSAEELK 10 1 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 1 KGDS(0.019)S(0.981)AEELK;KGDS(0.022)S(0.978)AEELK 136.3 4.3942e-07 17582100.0 10124.8 10952.3 9751.7 10607.3 13274.7 10417.400000000001 10408.5 11056.599999999999 11604.4 11434.2 12282.599999999999 True False 11152.662242516186 11875.288758100194 10413.509003735839 11262.48883007383 12342.330867228882 10332.564148277967 10804.601163249748 10836.067439265094 11116.70742338803 10712.242660627215 10771.918065816468 1.0353459963558365 1.1024302900878122 0.9667274611735117 1.0455416353206524 1.1457876667662328 0.9592130282783394 1.003034101933712 1.0059552414952169 1.03200816748372 0.9944600947737778 1.0 13.394987541006516 -7.306390097734633 24.999948719460754 1.010202998831108 1.0556779859402654 0.2890242537010137 0.04495523139519301 542.6996977097504 301828.3817806379 0.0065209505949649985 0.0104244783215556 4.938668800534498e-08 7.306390097734633 0.04547498710915732 KGDSS(ph)AEELKLATQLTGPVMPVR ddPTM_A549_PD325901_60min_R1 1 KGDSSAEELKLATQLTGPVMPVR 23 2 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 1 KGDS(0.452)S(0.546)AEELKLAT(0.002)QLTGPVMPVR 50.705 0.0036246000000000004 6074400.0 2021.2 1854.3 2338.7 2315.6 2464.0 2403.0 2506.1 2829.0 2523.5 2103.0 3031.5 True False 2226.3907360712024 2010.5683686664154 2497.4182457455636 2458.629352890835 2290.9371403385358 2383.4307647121113 2601.4710068905392 2772.573375692432 2417.446070707636 1970.2162210997749 2658.6447182618213 0.8374156654999696 0.7562380768126448 0.9393576466201679 0.9247679225444786 0.8616936007291389 0.8964833655060009 0.9784951667371858 1.0428521557047665 0.9092775932423656 0.7410603634124797 1.0 11.376475283577166 -2.264394297927012 0.2423049406876135 0.9770120104205924 6.810462533279795e-18 0.059284361629759585 0.08779392857730738 25.75438378597252 0.3475367497621032 0.02881576871762683 10.048935823966595 0.005440085207642057 2.264394297927012 -0.9770120104205924 KGDSSAEELK ddPTM_A549_MK2206_60min_R1 2 KGDSSAEELK 10 1 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 0 ; 93.01100000000001 0.00061429 21066400.0 5238.6 5853.700000000001 5662.7 5180.8 8050.799999999999 5581.7 4790.6 5723.6 8821.8 7676.0 7627.9 False True 6122.747608526649 6151.62832682576 6465.756009381747 6450.096232574949 6866.537984830268 6172.351789167409 5660.990009469189 6534.93782778986 6823.6763855198105 5941.986268786473 5733.681910669846 1.0678561705930683 1.0728931989369963 1.1276795800878978 1.1249483897200372 1.1975791632340613 1.076507536576321 0.9873219508278993 1.1397454427370575 1.1901037573817248 1.0363299466838216 1.0 12.485246154600068 KGDSSAEELK ddPTM_A549_PD325901_60min_R1 2 KGDSSAEELK 10 1 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 0 ; 84.506 0.00090949 22108000.0 7137.5 7610.7 7551.7 7677.0 8725.7 7474.9 8485.4 7978.200000000001 8228.5 8411.5 8925.2 False True 7862.093745650209 8252.080398753971 8064.203774061133 8151.190854267989 8112.836934030823 7414.026892695197 8808.316540389045 7819.068542223175 7882.68476037955 7880.39645448443 7827.456981504336 1.0044250341110423 1.054247940072106 1.030245684277309 1.0413587546413363 1.036458833718386 0.9471820682264953 1.1253101181140188 0.9989283314745796 1.0070556477034256 1.0067633042385524 1.0 12.934327959218507 KGDSSAEMS(ph)VYASLFK ddPTM_A549_MK2206_60min_R1 4 KGDSSAEMSVYASLFK 16 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 KGDS(0.012)S(0.012)AEMS(0.931)VY(0.043)AS(0.001)LFK;KGDS(0.121)S(0.121)AEMS(0.757)VY(0.001)ASLFK;KGDS(0.003)S(0.003)AEMS(0.994)VYASLFK;KGDS(0.01)S(0.009)AEMS(0.976)VY(0.005)ASLFK 84.493 4.7168999999999995e-05 9259500.0 5177.8 5969.799999999999 5703.1 5652.4 7324.3 5395.9 5377.42 5206.33 8833.7 7765.1 8376.3 True False 6051.686054943929 6273.637320922564 6511.885336871999 7037.238253745881 6246.905172441542 5966.890556491465 6354.427607548077 5944.343221216925 6832.881054520207 6010.958516903837 6296.233535880623 0.9611597188155299 0.9964111536160009 1.034250921564842 1.1176901577176992 0.992165417124703 0.9476920642297785 1.0092426799825356 0.9441109811670159 1.0852331025495427 0.9546911630022812 1.0 12.620273338024694 -8.775859625950563 24.999457782479283 1.0402489554327845 1.0035207121361585 0.0 0.0552644414770065 460.6934844164794 798672.3627164339 0.009595187623406456 0.01023735834820022 1.675484343914829e-09 8.775859625950563 -0.03672824329662605 KGDSSAEMS(ph)VYASLFK ddPTM_A549_PD325901_60min_R1 2 KGDSSAEMSVYASLFK 16 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 KGDS(0.005)S(0.005)AEMS(0.989)VY(0.001)ASLFK;KGDS(0.082)S(0.082)AEMS(0.828)VY(0.007)ASLFK 81.016 6.9523e-05 10110900.0 5279.700000000001 5164.2 6185.700000000001 6232.6 6897.5 7174.700000000001 6834.9 7374.7 7545.6 7614.7 7174.5 True False 5815.69125729029 5599.405257761476 6605.4987996358395 6617.573546738399 6413.043395083216 7116.271621964202 7095.00585970079 7227.60582315977 7228.484672530829 7133.90654246717 6292.08198290267 0.9242872666143154 0.8899129529743274 1.0498113053175102 1.0517303437431649 1.0192243859042573 1.130988382112802 1.1276086165087942 1.1486827162772477 1.1488223917254456 1.1337910983760178 1.0 12.619321753183737 -5.837624394867237 4.1330748109724995 1.080205932463247 0.9058923403212756 0.6529910246847281 0.051317340275700646 0.12382212610288232 4.00144557444766 0.009068231606097883 0.031966146992012244 1.4533680381149096e-06 5.837624394867237 -0.17431359214197129 KGDVEGSQS(ph)QDEGEGSGESER ddPTM_A549_MK2206_60min_R1 2 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGSQS(1)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER 354.95 2.2132999999999986e-232 669610000.0 21272.0 24129.0 22717.9 21004.7 29452.0 23599.4 21691.3 23357.3 33780.0 34205.0 33854.0 True False 24862.193549532105 25357.063036708183 25939.639826502134 26150.8524429368 25119.649814828488 26096.67284398611 25632.328433264935 26668.26880373124 26128.8839355754 26478.06674359578 25447.117477132222 0.9770141381189539 0.9964611142890756 1.0193547402692078 1.0276548008408803 0.9871314437637972 1.0255256952948641 1.0072782686015087 1.047987805601023 1.0267915004147656 1.040513400678486 1.0 14.635214623788709 -7.284486563297165 24.911562408503997 1.0162476742901774 1.0036844052079632 0.20218180121274953 0.019058693304515918 1543.7422042765309 1668618.3192466784 0.0029155170360799696 0.004662227546008725 5.1941374347898794e-08 7.284486563297165 -0.012563269082214168 KGDVEGSQS(ph)QDEGEGSGESER ddPTM_A549_PD325901_60min_R1 2 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGS(0.001)QS(0.999)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER 366.85 8.825399999999995e-258 750220000.0 29618.0 29103.0 30467.0 27421.0 35114.0 31845.0 32092.0 33284.0 33904.0 33612.0 33001.0 True False 32624.797556380785 31555.61194698737 32534.67383295423 29114.732892390573 32647.713776723736 31585.66487817609 33313.27862141621 32620.124509207133 32479.132784335932 31489.732583740213 28942.086210575064 1.1272441564513103 1.0903019124950764 1.1241302232410075 1.0059652466155817 1.128035952183526 1.0913402941435195 1.1510323885789535 1.1270826944495853 1.1222111822909462 1.0880256645851007 1.0 14.820881297865975 -10.713688979726284 0.9418621971492438 0.9991977859103839 1.1068043949854782 0.13903965010189978 0.04416012055909312 0.34944474885935406 0.5446626444959431 0.02555196859866934 0.0064545107603746045 1.9333523929192436e-11 10.713688979726284 0.10760660907509434 KGDVEGSQSQDEGEGS(ph)GESER ddPTM_A549_MK2206_60min_R1 1 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGSQSQDEGEGS(0.968)GES(0.032)ER 127.63 9.759800000000001e-18 6162300.0 566.96 593.19 790.81 869.75 880.34 755.83 686.74 724.14 1022.4 1353.0 981.16 True False 662.6489871588343 623.3808372806557 902.9587493208504 1082.8387890445615 750.8431521793466 835.8114289206515 811.5117686934566 826.7890625857412 790.8280324373089 1047.3563603006894 737.5108933615834 0.8984938298856473 0.8452496673496963 1.2243327623340636 1.4682342983558785 1.0180773720602208 1.133286893039658 1.1003386878729022 1.1210533566727765 1.0722933580447949 1.420123241199634 1.0 9.526520548536796 -9.749145417523177 0.7998482930309145 1.008424807673426 1.1069974673351213 0.0 0.19865703970527676 1.3915455437017863 1.8686146255360436 0.06284825119912282 0.03476221928358036 1.7817820623817878e-10 9.749145417523177 0.09857265966169537 KGDVEGSQSQDEGEGS(ph)GESER ddPTM_A549_PD325901_60min_R1 1 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGSQSQDEGEGS(0.997)GES(0.003)ER 162.26 3.963e-28 8587700.0 1263.6 1185.1 911.23 1564.8 1931.6 1302.5 1395.5 1517.7 1510.1 1800.8 1885.9 True False 1391.8797417868457 1284.9725361088122 973.0715474711299 1661.454142081353 1795.931079658244 1291.892871842499 1448.6065161469007 1487.4282828873825 1446.6357485142069 1687.0971806735502 1653.9462557050858 0.8415507680408153 0.7769131141211246 0.5883332327847041 1.0045393774739473 1.0858460929207336 0.7810972499174458 0.875848602184085 0.8993208078900267 0.874657047364274 1.0200435321608028 1.0 10.691696640158279 -2.00000004265988 0.0455382577770889 1.2789809662262868 0.1348845074126343 0.24149392842507778 0.1170965358487487 566.5228029591237 1.9018726793938445 11.887690564415221 46.82026066567966 0.009999999017720008 2.00000004265988 -1.1440964588136524 KGDVVHCWYTGTLQDGTVFDTNIQT(ph)SAK ddPTM_A549_MK2206_60min_R1 1 KGDVVHCWYTGTLQDGTVFDTNIQTSAK 28 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 KGDVVHCWYTGTLQDGTVFDT(0.002)NIQT(0.643)S(0.354)AK 151.99 1.4766999999999999e-36 3338100.0 909.03 990.48 881.68 556.86 1443.6 1031.2 911.71 1098.1 1492.5 1248.7 1354.9 True False 1062.4520403502802 1040.891201317863 1006.7154817227995 693.2907249983951 1231.2483523253563 1140.3208995448388 1077.3559056346082 1253.7590377902095 1154.4511330327502 966.6178027401861 1018.4409366623285 1.0432141934830177 1.022043757126564 0.988486858179566 0.680737291718136 1.2089541062248028 1.119673079208638 1.0578481940890534 1.2310571901195115 1.1335474561894177 0.9491152289184496 1.0 9.992146599914195 KGDVVHCWYTGTLQDGTVFDTNIQT(ph)SAKK ddPTM_A549_MK2206_60min_R1 1 KGDVVHCWYTGTLQDGTVFDTNIQTSAKK 29 2 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 KGDVVHCWYT(0.003)GT(0.003)LQDGT(0.003)VFDT(0.019)NIQT(0.486)S(0.486)AKK 59.748000000000005 0.00073682 3268400.0 752.87 1280.7 939.17 842.7 1151.2 768.21 821.4 1195.0 1468.9 1113.8 1098.4 True False 879.9360500957234 1345.8821596880184 1072.358428193451 1049.1615378302404 981.8600049854192 849.5014723034723 970.6377476261828 1364.394909534015 1136.196495351294 862.191806432305 825.6369657021929 1.06576629517472 1.6301137371476144 1.2988256010090642 1.2707298503016309 1.1892151705566631 1.0289043582017707 1.1756229286568687 1.6525361220637884 1.3761453793253728 1.044274714249286 1.0 9.689363754820484 -10.780279194946585 1.0917941100999264 1.0043083631989458 1.3058005304758744 0.2366170128799816 0.19034841931346375 0.5549516560499199 1.2006817829100895 0.12308108403120792 0.032929960535016484 1.658520351465046e-11 10.780279194946585 0.3014921672769286 KGDVVHCWYTGTLQDGTVFDTNIQT(ph)SAKK ddPTM_A549_PD325901_60min_R1 1 KGDVVHCWYTGTLQDGTVFDTNIQTSAKK 29 2 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 KGDVVHCWYTGTLQDGTVFDT(0.001)NIQT(0.499)S(0.499)AKK 119.35 9.049e-21 7201400.0 1567.8 1210.3 1455.7 1858.4 1674.9 1347.5 1280.8 1500.6 1524.3 1392.7 1403.6 True False 1726.9619018466417 1312.2962285482195 1554.4925558352152 1973.1891472673747 1557.2608020913196 1336.5264067622006 1329.541544880653 1470.6693558020725 1460.2389718960367 1304.7646843203306 1230.9660981534853 1.4029321395911525 1.0660701627093823 1.2628232070461054 1.602959781124162 1.2650720474164916 1.0857540339795397 1.0800797413308425 1.194727749211091 1.1862544176370682 1.059951761691526 1.0 10.265575313991079 -7.182120927068387 4.7547791468993355 1.0981165529888917 1.3222312152836535 0.41849024030887805 0.1294397590083161 0.18905422503326694 7.787280156239378 0.020552884309325236 0.03601565742706073 6.574747413999246e-08 7.182120927068387 0.22411466229476185 KGDVVHCWYTGTLQDGTVFDTNIQTS(ph)AK ddPTM_A549_MK2206_60min_R1 1 KGDVVHCWYTGTLQDGTVFDTNIQTSAK 28 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 KGDVVHCWYTGTLQDGTVFDT(0.001)NIQT(0.361)S(0.639)AK 115.13 6.343100000000001e-21 3337700.0 947.12 859.35 1368.7 988.52 1318.1 1159.4 1067.2 938.06 1097.6 1206.1 1255.1 True False 1106.9707011391897 903.087244419379 1562.8022409876558 1230.707444376349 1124.209236076511 1282.0869384525674 1261.0964259394486 1071.0328776882654 848.9953525070326 933.6411723271708 943.4240310022046 1.173354361095984 0.9572442663560566 1.6565215530152249 1.3045114433527432 1.1916266695923117 1.3589721019620407 1.3367228144483227 1.1352613909468696 0.8999085507766218 0.9896304754240345 1.0 9.881762539599361 -8.546411391952098 3.7938363013908623 0.953303218042386 1.2835591782948632 0.43276810126210574 0.16025190440466353 0.14553504165763925 4.58908850731706 0.027190260632386297 0.03154752454416639 2.841767924844604e-09 8.546411391952098 0.33025596025247717 KGDVVHCWYTGTLQDGTVFDTNIQTS(ph)AK ddPTM_A549_PD325901_60min_R1 2 KGDVVHCWYTGTLQDGTVFDTNIQTSAK 28 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 1 KGDVVHCWYTGTLQDGTVFDTNIQT(0.048)S(0.952)AK;KGDVVHCWYTGTLQDGTVFDTNIQT(0.077)S(0.923)AK 173.25 1.0534999999999999e-57 16384500.0 3528.0 3403.3 4243.2 3649.1 3180.4 3847.9 3469.3 3577.6 3578.7 4876.3 4605.799999999999 True False 3886.1599628236722 3690.1080348823884 4531.169068434421 3874.496619292603 2957.019675784367 3816.5639781671803 3601.326109973802 3506.2419614270925 3428.29968426448 4568.409585805439 4039.3157985717585 0.9620837182865871 0.9135477934622381 1.121766480857123 0.9591962630558787 0.7320595425665715 0.9448540714535516 0.8915683471065018 0.8680286801707475 0.8487327694152251 1.1309859920882541 1.0 11.979895226747457 -6.527609612523384 24.985798904184957 0.9070820168246374 0.9988920611980193 0.1043994684369497 0.10433051903259041 170.09230271023753 898331.7425811688 0.012667722894192449 0.026446083224472675 2.967497675782655e-07 6.527609612523384 0.09181004437338192 KGEDFVK ddPTM_A549_MK2206_60min_R1 1 KGEDFVK 7 1 G3XAL0;P40926;P40926-2 G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial 0 58.676 0.032493 5535900.0 4763.0 5507.3 4843.1 4822.9 7202.7 5241.7 4421.8 4663.0 8619.9 7530.2 7608.1 False True 5566.877955830267 5787.598046419784 5529.924405148911 6004.51071650821 6143.192371358993 5796.373214841138 5225.183823293716 5323.994529838583 6667.506413151758 5829.122590048965 5718.798797122045 0.9734348336632807 1.0120303671694766 0.9669730657304847 1.0499601279083202 1.0742102650036442 1.0135648097565755 0.9136855498261737 0.9309637773089439 1.1658928124044416 1.0192914275953266 1.0 12.481496433165256 -8.751198476921456 24.999984308434332 1.0783382766402927 0.9944964275154715 0.19966508879865574 0.059664763760627154 240.18698847534995 586341.6175012243 0.012624973130880008 0.014235362140465004 1.7733788438030927e-09 8.751198476921456 -0.08384184912482118 KGEDFVK ddPTM_A549_PD325901_60min_R1 2 KGEDFVK 7 1 G3XAL0;P40926;P40926-2 G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial 0 ; 66.62100000000001 0.024382 22727000.0 12519.4 12494.2 13098.4 12915.7 15590.0 15335.400000000001 14591.3 14467.400000000001 14748.099999999999 13954.5 15700.599999999999 False True 13790.36027170484 13547.13008239871 13987.336191077826 13713.47345531705 14495.012182580258 15210.51358683566 15146.579906165738 14178.836357544253 14128.288644899265 13073.410488510139 13769.525734303654 1.001513090414529 0.9838487064699043 1.0158182976652237 0.9959292512997043 1.0526878312496428 1.1046505072387578 1.1000073784989897 1.0297258330561738 1.0260548487666379 0.9494452271468362 1.0 13.749191248931448 -6.735875483185409 24.845690353479647 1.0300881873912537 0.9993567724261978 0.1499163709670308 0.04146394150279329 387.9441475679218 377043.0873022129 0.005916720328446059 0.012313504282090815 1.8370649737789027e-07 6.735875483185409 -0.030731414965055937 KGEKLDMSLVS(ph) ddPTM_A549_PD325901_60min_R1 1 KGEKLDMSLVS 11 2 Q9BU64-2;Q9BU64 Q9BU64-2 CENPO Centromere protein O 1 KGEKLDMS(0.005)LVS(0.995) 46.352 0.011551 3639000.0 1478.6 1574.7 1599.6 2322.7 2283.4 2246.6 1704.3 2189.6 2177.2 2489.2 2009.8 True False 1628.7063835122094 1707.4054954101302 1708.158475176211 2466.1679037655667 2123.021861302357 2228.304434457856 1769.1580691287447 2145.9267102920285 2085.699855416948 2332.0314871904698 1762.6073411718978 0.9240324520771245 0.9686817111943573 0.96910890773921 1.3991589880284372 1.2044780545908949 1.2642092100764384 1.0037164987367473 1.2174729221684022 1.183303737989788 1.3230578545304261 1.0 10.783495403654852 -6.039080389511453 24.998864748237047 1.131460676920902 0.9519912817536383 0.3500045824614165 0.12651702554463606 500.64446029889604 320250.9581409079 0.017763233173445712 0.04700666792542475 9.139440513948695e-07 6.039080389511453 -0.17946939516726357 KGEQGGPPPKAS(ph)PSTAGETPSGVK ddPTM_A549_MK2206_60min_R1 2 KGEQGGPPPKASPSTAGETPSGVK 24 2 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 KGEQGGPPPKAS(0.498)PS(0.498)T(0.005)AGETPSGVK;KGEQGGPPPKAS(0.719)PS(0.139)T(0.139)AGET(0.002)PSGVK 175.46 6.2854e-42 33366800.0 2587.4 2716.99 2683.3900000000003 2339.89 3148.22 3225.87 2637.5499999999997 3370.43 4824.030000000001 3564.76 4075.76 True False 3024.0898641434455 2855.2731857974154 3063.9350518330284 2913.163155041653 2685.121008421815 3567.2294222407995 3116.7586939998055 3848.1987740089785 3731.39490739295 2759.478240166658 3063.6363067465113 0.9870916653794775 0.9319882975370627 1.0000975132347985 0.9508841335463033 0.876449010122005 1.1643775778428116 1.0173396519476912 1.2560886439211998 1.2179627520329193 0.9007199170769523 1.0 11.581029325529322 -7.266841432741266 24.99287466658882 1.114795322790499 0.9512500994444517 0.3235176853145222 0.1005469712104008 350.44205899636484 1621337.0597102132 0.014646302451882478 0.023818831893985006 5.40951796295261e-08 7.266841432741266 -0.16354522334604726 KGEQGGPPPKAS(ph)PSTAGETPSGVK ddPTM_A549_PD325901_60min_R1 4 KGEQGGPPPKASPSTAGETPSGVK 24 2 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 KGEQGGPPPKAS(0.79)PS(0.206)T(0.004)AGETPSGVK;KGEQGGPPPKAS(0.881)PS(0.058)T(0.058)AGET(0.003)PS(0.001)GVK;KGEQGGPPPKAS(0.718)PS(0.126)T(0.154)AGET(0.002)PSGVK;KGEQGGPPPKAS(0.611)PS(0.16)T(0.16)AGET(0.066)PS(0.003)GVK 199.59 5.371899999999999e-62 78344500.0 11903.690000000002 13365.86 12806.22 12916.82 15460.86 15016.119999999999 15995.300000000001 14680.85 13822.52 14674.180000000002 15297.9 True False 13112.143845766586 14492.247929689753 13675.32709925675 13714.66263517335 14374.942530671446 14893.83369729872 16604.009894464016 14388.028929845976 13241.607553508107 13747.649770488784 13416.355281378026 0.9773253294779927 1.080192617573647 1.019302695288502 1.0222346045210489 1.0714491550938536 1.1101251707288522 1.2375946780054694 1.0724245615213126 0.9869750223361728 1.0246933300559353 1.0 13.71170517838661 -8.749603530131953 10.510705432293008 0.9938428517858626 1.0771218483508167 0.18856031574254706 0.0634291695780144 0.27137252923300814 225.19675983724972 0.011170089877781376 0.012468786432189202 1.7799035525165056e-09 8.749603530131953 0.08327899656495408 KGEQGGPPPKASPS(ph)TAGETPSGVK ddPTM_A549_MK2206_60min_R1 1 KGEQGGPPPKASPSTAGETPSGVK 24 2 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 KGEQGGPPPKAS(0.384)PS(0.505)T(0.111)AGETPSGVK 94.60600000000001 3.227e-08 30939000.0 947.6 1087.1 1207.2 953.31 1485.7 1260.6 1443.3 1053.3 1862.9 1823.6 1438.0 True False 1107.5317134043164 1142.428746620477 1378.399112530356 1186.8709927957113 1267.1554980948888 1393.995855281444 1705.5289276221943 1202.6085005959649 1440.956124440007 1411.6474934547955 1080.904913219003 1.0246338043797183 1.0569188211183649 1.2752269840511654 1.0980345988632199 1.1723098698119707 1.2896563224326887 1.5778713805111881 1.1125941661367056 1.3331016510497198 1.3059867488721282 1.0 10.078023900000042 -5.650685398544438 6.643764860153419 1.196928453366719 1.0335894124611733 0.16423283361901653 0.1497800294899631 0.34814980791732825 18.74063573208283 0.023449367266162258 0.09268393484444344 2.235190801178888e-06 5.650685398544438 -0.16333904090554574 KGEQGGPPPKASPS(ph)TAGETPSGVK ddPTM_A549_PD325901_60min_R1 1 KGEQGGPPPKASPSTAGETPSGVK 24 2 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 KGEQGGPPPKAS(0.101)PS(0.887)T(0.012)AGETPSGVK 207.23 3.538e-63 48224000.0 9109.7 9365.2 10790.0 8912.5 12295.0 11393.0 10438.0 11233.0 10348.0 11232.0 12068.0 True False 10034.510037793309 10154.43827117226 11522.274285540962 9463.004883243899 11431.44161544736 11300.219185337111 10835.22380189277 11008.94900288197 9913.109546139336 10522.809603134889 10583.712505354993 0.9481087125822997 0.9594401081883568 1.0886798256954815 0.8941101601593906 1.0800975186791444 1.0676989931103655 1.02376399551769 1.040178387055754 0.9366382109419209 0.9942456012302592 1.0 13.369558157622977 -11.76237446637415 4.856013271389086 1.0006802951462002 0.9890692851247171 0.0 0.06220274604558074 2.043235059843526 87.2291345801281 0.06750757225105758 0.008801954854507148 1.72832548400133e-12 11.76237446637415 -0.011611010021483015 KGES(ph)PSLESR ddPTM_A549_MK2206_60min_R1 1 KGESPSLESR 10 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 KGES(0.442)PS(0.442)LES(0.115)R 67.01899999999999 0.0020027 20188000.0 6631.7 6786.6 6438.0 5280.9 7182.4 6291.0 6016.2 6653.8 8989.9 8372.4 8411.3 True False 7750.968830501691 7132.008952087693 7351.005207480477 6574.720737068612 6125.878474467747 6956.709444372168 7109.265665045824 7596.996526407888 6953.702003920345 6481.069025115667 6322.542069929765 1.2259260191190462 1.128028706366033 1.1626660805377824 1.0398856447849067 0.9688948537966466 1.1003025946570646 1.124431531876671 1.2015731081552583 1.0998269251528432 1.0250732938480334 1.0 12.626289016214834 -14.999999999925533 0.20731813047468384 0.43506256201552446 1.1293994641334697 0.24214234231261977 0.0683714227743809 48.46040504636705 0.5803384594632134 11.059812798829249 0.057395330476081356 1.0000000001714659e-15 14.999999999925533 0.6943369021179453 KGES(ph)PSLESR ddPTM_A549_PD325901_60min_R1 1 KGESPSLESR 10 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 KGES(0.973)PS(0.019)LES(0.008)R 88.706 0.00029201 43254000.0 8936.0 8872.0 9353.8 8625.5 11399.0 8679.3 8516.3 9077.5 9522.3 9475.6 8690.5 True False 9843.176141664486 9619.674576286705 9988.605116968769 9158.277545068193 10598.373564415166 8608.618658412746 8840.39245679818 8896.442141339008 9122.110845690246 8877.30899888399 7621.623593618454 1.2914802234403344 1.2621555575561627 1.310561325192204 1.2016176648682009 1.3905663844760228 1.1294993189667224 1.1599093484753293 1.1672633831967185 1.1968723899364622 1.164753006999311 1.0 12.895882644710719 -14.999999999665246 0.11350085223369674 0.19655022313256124 1.3726083660294155 0.39724517981890173 0.07734324255410034 33.518311217791776 0.26789200557436627 6.195878257781341 0.26828326633575367 1.0000000007708006e-15 14.999999999665246 1.1760581428968542 KGES(ph)QTDIEITREEDFTR ddPTM_A549_MK2206_60min_R1 4 KGESQTDIEITREEDFTR 18 2 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 1 KGES(0.988)QT(0.012)DIEITREEDFTR;KGES(0.937)QT(0.056)DIEIT(0.005)REEDFT(0.002)R;KGES(0.935)QT(0.055)DIEIT(0.01)REEDFTR;KGES(0.994)QT(0.005)DIEITREEDFTR 85.24799999999999 1.5039000000000001e-05 26655100.0 3070.97 4174.42 3185.86 3251.6400000000003 4212.96 4001.2999999999997 3390.0099999999998 3334.0799999999995 4932.450000000001 4937.139999999999 5160.2699999999995 True False 3589.2746579920345 4386.880147610568 3637.662853417794 4048.2919459716695 3593.239164874367 4424.714910152022 4005.9309359998 3806.6960501917715 3815.2579505041126 3821.836645007351 3878.832542793204 0.9253492174238966 1.130979514895869 0.9378241554089519 1.0436882493144277 0.926371305085221 1.1407336772950039 1.0327671771865332 0.981402524649985 0.983609864156881 0.9853059143035833 1.0 11.921406777753196 -8.261601737039895 24.129683573717646 0.9912296282643658 1.0227975688351172 0.04551683383750338 0.069038462579571 23.26961421169928 3458784.2144405846 0.010108941904280659 0.012611983566331024 5.475178254021059e-09 8.261601737039895 0.03156794057075141 KGES(ph)QTDIEITREEDFTR ddPTM_A549_PD325901_60min_R1 4 KGESQTDIEITREEDFTR 18 2 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 1 KGES(0.824)QT(0.176)DIEITREEDFTR;KGES(0.945)QT(0.053)DIEIT(0.002)REEDFTR;KGES(0.819)QT(0.172)DIEIT(0.008)REEDFTR;KGES(0.848)QT(0.15)DIEIT(0.002)REEDFTR 137.52 1.0113e-13 71502000.0 10827.4 11163.1 11740.300000000001 12849.599999999999 12031.2 11488.1 11020.4 12784.1 13873.8 13411.6 14252.8 True False 11926.589677289405 12103.853613902853 12537.067358159087 13643.290608441044 11186.170017386763 11394.544722467412 11439.787352594272 12529.111096567558 13290.732433439109 12564.789287162024 12499.795955943291 0.9541427491557297 0.9683240955743618 1.0029817608501101 1.0914810654932374 0.8949082094470561 0.9115784579707188 0.9151979274633667 1.0023452495326797 1.0632759510862055 1.0051995513725032 1.0 13.609616924376702 -8.517141832085445 23.882113674138505 1.0300345403508322 0.9643806961091749 0.20512605610890922 0.05258949188565421 165.45829522314634 688786.268501024 0.009525161163781323 0.01097969434482664 3.0398920942342357e-09 8.517141832085445 -0.06565384424165732 KGESGQSWPR ddPTM_A549_PD325901_60min_R1 2 KGESGQSWPR 10 1 B4DDC6;A0A087WYT3;Q15185-4;Q15185;Q15185-3 B4DDC6 PTGES3 Prostaglandin E synthase 3 0 ; 61.343999999999994 0.0076433000000000004 14580700.0 5771.1 5739.700000000001 4853.5 5299.9 6039.9 5748.299999999999 5427.0 4875.0 6897.7 6756.4 7581.8 False True 6356.977823540725 6223.4046624789 5182.887696466455 5627.262786053781 5615.678260523829 5701.487750642788 5633.527454768347 4777.764300636484 6607.813656397886 6329.799750945561 6649.2866649900925 0.9560390676208268 0.935950723142446 0.7794652204958256 0.846295711039579 0.8445534902400235 0.8574585572708623 0.8472378675490209 0.7185378735124218 0.9937627882986951 0.9519517009656542 1.0 12.698983861353879 -8.86668209016516 12.45549727569722 0.9972324260959403 0.8489378808056859 0.4709576276663868 0.06254766852709025 0.2574652056492714 28.834678371038653 0.010504929022123492 0.011179428123150032 1.3593081156647448e-09 8.86668209016516 -0.14829454529025443 KGESPLGS(ph)FAR ddPTM_A549_PD325901_60min_R1 1 KGESPLGSFAR 11 1 E7ESJ3;Q9UPS8 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 KGES(0.001)PLGS(0.999)FAR 54.598 0.0077914 3378900.0 945.54 1134.2 995.81 832.03 1105.3 1105.5 1216.1 1312.3 826.88 1267.9 1707.8 True False 1041.5305247302422 1229.7830144752459 1063.3916548919865 883.4226034227685 1027.6675410779967 1096.4971745273572 1262.3793509754541 1286.125147020565 792.1291091526576 1187.844577618833 1497.7514266361663 0.695396115942576 0.8210861913430075 0.7099920827852468 0.589832590182783 0.6861402518481043 0.7320955634073438 0.8428497069174291 0.8587040039808892 0.5288788880887386 0.7930852586711534 1.0 10.548582492359715 -11.060245920442524 1.3687134991924328 1.0000283814131254 0.7009689265539124 0.1925155897759272 0.11281272501063185 0.2921767395854541 0.9763451686223026 0.08001402499951821 0.01774535245434761 8.704705440399328e-12 11.060245920442524 -0.29905945485921304 KGESPS(ph)LESR ddPTM_A549_MK2206_60min_R1 1 KGESPSLESR 10 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 KGES(0.365)PS(0.613)LES(0.021)R 76.72800000000001 0.00060752 16441000.0 6833.7 6940.4 6459.2 5541.7 9246.6 6972.6 6640.4 7037.0 9056.9 8397.5 8758.0 True False 7987.061492075855 7293.636715154771 7375.211686262489 6899.41674877637 7886.437388896957 7710.435903962706 7846.8747252701605 8034.516299908672 7005.526610897361 6500.49891768296 6583.146891496546 1.2132588902721806 1.1079255613414862 1.1203170471236261 1.0480423515520136 1.1979737834931 1.1712386235710888 1.1919640947714492 1.2204674196601721 1.0641607617697857 0.9874455218490806 1.0 12.684561674013397 -8.965589199769282 4.1121249708432375 1.0266665546472618 1.1550348019815804 0.606162669152391 0.051154252367460976 0.11717600038076767 4.023436122951351 0.009688406005421025 0.009987055201006201 1.082457366311581e-09 8.965589199769282 0.12836824733431862 KGESPSLES(ph)R ddPTM_A549_PD325901_60min_R1 1 KGESPSLESR 10 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 KGES(0.152)PS(0.225)LES(0.623)R 53.754 0.0085948 28182000.0 14705.0 15631.0 13535.0 13836.0 15939.0 14150.0 15409.0 15446.0 15189.0 14851.0 16228.0 True False 16197.840774751152 16948.27922699928 14453.566492566893 14690.618296164103 14819.499626564893 14034.767091417554 15995.397927128337 15137.917412847406 14550.659151170308 13913.30532551249 14232.058877767722 1.1381235079103158 1.1908522422904417 1.0155639894903186 1.0322201743496655 1.0412758796069084 0.986137509123268 1.1238990833655962 1.0636491559555554 1.0223860986058932 0.9776031314237208 1.0 13.796856763682548 -2.0000000000092726 0.3894222929800984 1.0157099616773948 3.41863801437477 0.4347141240916308 0.04927878142761048 36.79393150314132 0.4341472109511634 0.010878492723351016 68.14109526857368 0.00999999999978649 2.0000000000092726 2.402928052697375 KGFADIPTGKT(ph)SPYILR ddPTM_A549_PD325901_60min_R1 1 KGFADIPTGKTSPYILR 17 2 P49454 P49454 CENPF Centromere protein F 1 KGFADIPT(0.064)GKT(0.504)S(0.432)PYILR 46.361999999999995 0.009302 3876600.0 585.28 633.42 1280.9 1066.0 645.57 1652.2 1240.1 1283.4 1578.3 1272.1 1177.4 True False 644.6971947396366 686.8005263876832 1367.829576677425 1131.8443989383454 600.2273902955955 1638.7450309851642 1287.2926841087576 1257.8015801921765 1511.9695396860952 1191.7793889020552 1032.5872641535436 0.6243512941912205 0.6651258932102783 1.3246624514574987 1.0961246939900688 0.5812849055306021 1.5870281262170267 1.2466672104115162 1.2181068117504343 1.4642535233334704 1.1541682047366797 1.0 10.01204799390166 -7.258356706600898 24.99331935512766 1.2495154952336767 0.886697833866999 0.4100975312728846 0.24849374327649354 276.4826316723224 2241628.526778903 0.040899123597893515 0.06896775207596319 5.516241781335109e-08 7.258356706600898 -0.3628176613666777 KGGEFDEFVNDDT(ph)DDDLPISK ddPTM_A549_MK2206_60min_R1 2 KGGEFDEFVNDDTDDDLPISK 21 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK 275.15 2.5052999999999994e-127 126231000.0 23061.0 25975.0 26793.0 24040.0 35306.0 26540.0 23847.0 24466.0 36913.0 38279.0 39529.0 True False 26953.13301268145 27297.016551804703 30592.650283321593 29929.80107919661 30112.534169575407 29348.445184173823 28179.691219432192 27934.13042398259 28552.26443794834 29631.747314079897 29712.858355100136 0.9071201663119366 0.9186937259814063 1.0296098045400752 1.007301307787483 1.0134512745188875 0.9877355060704295 0.9484005504504154 0.9401360882261861 0.9609396745583522 0.9972701703736855 1.0 14.85879977759964 -5.639667477968921 7.8705738175472195 0.9828559329677294 0.9102273636394026 0.5345657646104306 0.026556205983980195 0.1446099558324482 9.185921617080297 0.004045257694797527 0.015815552669260127 2.2926223507831335e-06 5.639667477968921 -0.07262856932832684 KGGEFDEFVNDDT(ph)DDDLPISK ddPTM_A549_PD325901_60min_R1 3 KGGEFDEFVNDDTDDDLPISK 21 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK 288.0 8.168199999999998e-129 338280000.0 40034.0 38049.0 40690.0 41984.0 49055.0 43397.0 41555.0 45257.0 46399.0 47984.0 47029.0 True False 44098.22220852687 41255.52276297712 43451.468088847214 44577.2563274179 45609.546030562815 43043.589220229514 43136.39826476851 44354.313631570345 44449.01138686888 44954.28205099933 41244.73114139375 1.0691843779354722 1.0002616484890245 1.0535034872669773 1.0807988097825079 1.1058272115826324 1.0436142515432816 1.0458644551928298 1.075393447941664 1.077689444367823 1.0899399949265915 1.0 15.331922211836776 -10.83567446815349 1.0405250245334225 0.999395680811281 1.0616490012843303 0.0 0.036714415387731146 0.42465550804299085 0.8033108853145595 0.019619437393420848 0.004637777054723866 1.4599081459790162e-11 10.83567446815349 0.06225332047304921 KGGEFDEFVNDDT(ph)DDDLPISKK ddPTM_A549_PD325901_60min_R1 2 KGGEFDEFVNDDTDDDLPISKK 22 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGGEFDEFVNDDT(1)DDDLPISKK;KGGEFDEFVNDDT(1)DDDLPISKK 101.93 2.7471e-10 12289400.0 3231.7 3115.9 3612.3999999999996 3829.1 4630.1 4369.6 3452.5 4209.8 3897.6 3713.0 4020.3999999999996 True False 3559.779804948202 3378.487828252003 3857.5591871258716 4065.6148104829435 4304.897748977862 4334.015426336263 3583.8867767804923 4125.832236475786 3733.7974262691064 3478.5605463354545 3525.916287415415 1.0096041751341778 0.9581871924499148 1.0940586425418397 1.1530661760160905 1.220930220136752 1.2291884075084507 1.016441255163086 1.170144694359753 1.058958047187806 0.9865692383993968 1.0 11.783782507146524 -9.405961548536387 1.1732282670898697 1.013872093905173 1.10738328688624 0.19660213157279272 0.08336733440878139 0.5438858654999792 1.5581254162418623 0.022481087254599266 0.0178196513634455 3.9267970084437655e-10 9.405961548536387 0.09351119298106703 KGGGSST(ph)LSR ddPTM_A549_MK2206_60min_R1 1 KGGGSSTLSR 10 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 KGGGS(0.058)S(0.203)T(0.738)LS(0.001)R 43.593999999999994 0.040563 10895000.0 1450.3 1425.8 999.39 1186.4 1877.1 1559.3 1474.6 1558.4 2287.7 1870.1 2279.3 True False 1695.0751835693122 1498.3671299158086 1141.1185297148052 1477.0680532595204 1600.9810765793336 1724.3040910204302 1742.5157324684315 1779.3079723998396 1769.5396027062138 1447.6431111591435 1713.286904520218 0.9893703028355278 0.8745570435182923 0.6660405368792329 0.8621253389391619 0.9344500750898261 1.0064304387497185 1.0170600895104598 1.0385347414408155 1.0328332038478685 0.8449507828138894 1.0 10.742551047916884 -6.975162747717025 2.3938843584457867 1.017447895621483 0.8362773918888425 0.339038837637202 0.08793507728967023 0.16112477459270333 1.8585478502711792 0.01058430631285513 0.021278760954343855 1.0588568543079268e-07 6.975162747717025 -0.18117050373264043 KGGHERPPS(ph)PGLR ddPTM_A549_MK2206_60min_R1 4 KGGHERPPSPGLR 13 2 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR 88.133 3.9426e-05 113911000.0 4454.57 4197.28 3517.02 3227.6 5389.089999999999 4607.89 4002.23 4116.450000000001 6253.37 5852.26 6595.870000000001 True False 5206.392512219783 4410.903623967612 4015.7863210333912 4018.362144892468 4596.361999884353 5095.49386133017 4729.383385295762 4699.969393599407 4836.991679579905 4530.23040142891 4957.933442248837 1.0501134339266662 0.8896657600080444 0.8099718093859478 0.8104913451742114 0.9270721467772506 1.0277455154821395 0.9539021530612948 0.9479694409668352 0.9756064166496606 0.91373360578517 1.0 12.275523188764806 -7.004292038647716 24.68917852166121 0.9841291243968052 0.8823705014347237 0.22470998705635092 0.06605970320882931 131.51577985498815 756531.2317174774 0.008978744919641094 0.016678275430816215 9.90165890025455e-08 7.004292038647716 -0.10175862296208149 KGGHERPPS(ph)PGLR ddPTM_A549_PD325901_60min_R1 1 KGGHERPPSPGLR 13 2 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KGGHERPPS(1)PGLR 42.913000000000004 0.016053 53745000.0 1873.5 1430.5 1680.3 1689.1 1714.7 1543.7 1016.4 1559.7 1799.7 2154.6 2173.0 True False 2063.696340802195 1551.0532553401858 1794.3352624647337 1793.4318707755704 1594.2653873938661 1531.1286190121043 1055.0796581954212 1528.590559939021 1724.0648676253359 2018.558188293663 1905.7347757819348 1.0828874862481574 0.813887260205859 0.9415451117685076 0.9410710732503237 0.8365620482208649 0.8034321661490764 0.5536340479291068 0.8021003653626622 0.9046719876945843 1.0592020536884186 1.0 10.896131635657557 -9.456271251830483 1.4696309220606825 0.9746209705575919 0.8437666108335108 0.20539415122784943 0.12611835836288632 0.4767937094425091 2.1112747543876718 0.030264279671063956 0.024533167927873877 3.497266663712162e-10 9.456271251830483 -0.1308543597240811 KGGPS(ph)PGDVEAIK ddPTM_A549_MK2206_60min_R1 1 KGGPSPGDVEAIK 13 1 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 KGGPS(1)PGDVEAIK 59.513000000000005 0.0038518000000000003 2647300.0 1287.7 977.09 1160.9 1156.8 1482.7 1240.7 1053.2 1034.7 1806.9 1566.4 1817.6 True False 1505.0322787576379 1026.8197075111775 1325.5330763224729 1440.2160519307254 1264.596794120813 1371.9900504899936 1244.5528071583833 1181.371893635854 1397.6400350263834 1212.5491520879536 1366.2397567919752 1.101587236995326 0.7515662623683421 0.9702053169898346 1.0541459101676645 0.9256038611335489 1.004208846704564 0.9109329464110156 0.8646885641871499 1.0229829926104173 0.8875083206004064 1.0 10.415994964178065 -8.861400526904196 19.15477930240934 1.0108580629580675 0.9453652156334695 0.0 0.09603248257282267 4.13240887856378 779.6472789096886 0.014329458023301945 0.015254515603429776 1.375939926714614e-09 8.861400526904196 -0.06549284732459792 KGGPS(ph)PGDVEAIK ddPTM_A549_PD325901_60min_R1 1 KGGPSPGDVEAIK 13 1 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 KGGPS(1)PGDVEAIK 61.692 0.0031119 4671900.0 2013.4 1736.5 1546.0 2076.5 2150.1 1892.5 2042.4 1530.8 1823.5 2160.4 2391.7 True False 2217.7988858132594 1882.840949247281 1650.9208568532279 2204.7606889263348 1999.0843934423224 1877.0881074563754 2120.1246496441627 1500.2669931106311 1746.8646363920657 2023.9919753038307 2097.5360622354588 1.0573352829269738 0.8976441373983505 0.787076268473664 1.0511193245357606 0.9530631818133267 0.8949014709458011 1.0107691056260697 0.7152520617508309 0.8328174508381689 0.9649378676935604 1.0 11.034479899313368 KGGS(ph)WIQEINVAEK ddPTM_A549_MK2206_60min_R1 2 KGGSWIQEINVAEK 14 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 KGGS(1)WIQEINVAEK;KGGS(1)WIQEINVAEK 111.18 4.035e-06 8893500.0 4275.1 4464.2 4630.7 3967.4 7472.8 5936.0 4522.0 5115.4 7831.4 6506.6 7601.200000000001 True False 4996.632363840013 4691.408711860115 5287.402891314049 4939.413178103356 6373.561019158299 6564.143580002096 5343.588866283909 5840.523615255476 6057.600404176001 5036.754540970042 5713.612257552358 0.8745137294249137 0.8210932944668978 0.9254045694691765 0.8644991916583679 1.1155046460728253 1.1488605253752546 0.9352382740394494 1.0222121054041364 1.0602050211175869 0.8815359380245601 1.0 12.48018741875104 -6.74487809529216 24.9661145773899 1.0356816897882746 0.8716449534316314 0.4879427365100385 0.07421824600174404 118.59604519961664 178782.41860792192 0.0084982602731247 0.01765123107851965 1.7993759218060437e-07 6.74487809529216 -0.16403673635664318 KGGS(ph)WIQEINVAEK ddPTM_A549_PD325901_60min_R1 1 KGGSWIQEINVAEK 14 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 KGGS(1)WIQEINVAEK 112.56 2.8577999999999996e-06 5440900.0 4577.6 3454.4 4534.6 4235.7 3844.3 4394.8 3989.4 3942.4 5326.5 5045.4 5044.1 True False 5042.314582148988 3745.514411217854 4842.345224764968 4497.329569027341 3574.2896301150286 4359.010205891295 4141.218800083444 3863.7657392470287 5102.645728402708 4726.832582946647 4423.707677184381 1.1398390106460063 0.8466912112063005 1.0946349935687982 1.0166425761409756 0.8079850412697266 0.985374831246927 0.9361420560047636 0.8734224820448021 1.1534771510152 1.0685228156746558 1.0 12.111040338722416 -8.763051502420312 24.999999496592068 1.072475317493 0.9596555803170538 0.1968503214881414 0.10008091013019962 50.81370126307905 787992.9911998275 0.017573801829403827 0.019194749181283756 1.7256332392440882e-09 8.763051502420312 -0.11281973717594618 KGGSTSSS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 KGGSTSSSPSR 11 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 KGGS(0.013)T(0.013)S(0.048)S(0.182)S(0.712)PS(0.032)R 64.244 0.0026383 14573000.0 3918.8 3083.9 2309.1 1517.9 2558.6 2307.4 2724.8 2411.6 3019.6 4421.1 4022.2 True False 4580.197634538663 3240.8573375980927 2636.5651016764796 1889.7855681411193 2182.2333293569245 2551.567536471842 3219.8608896175133 2753.4516852152547 2335.6654213103475 3422.3704394127003 3023.3767329273105 1.5149278568747861 1.071933015261453 0.8720597314128596 0.6250579187038264 0.7217867709274955 0.8439462765863615 1.0649883140762157 0.9107206704436375 0.772535356203822 1.1319695630848736 1.0 11.56194504426351 -5.327027669809394 2.352367724655692 0.8701860638231769 1.617220206222204 0.6301434299843797 0.1408815475600836 0.22115618024398467 1.6068984437213034 0.01895790433707017 0.31597517586811663 4.709473204027282e-06 5.327027669809394 0.7470341423990272 KGGSYSQAASSDSAQGSDMS(ph)LTACKV ddPTM_A549_PD325901_60min_R1 1 KGGSYSQAASSDSAQGSDMSLTACKV 26 2 Q9GJ45;Q5SPM2;Q5RJ27;B0UXQ0;A0A140T8Y4 Q9GJ45 HLA-A 1 KGGSYSQAASSDSAQGS(0.157)DMS(0.826)LT(0.016)ACKV 129.93 4.6565e-24 4860800.0 775.66 607.35 579.94 576.15 586.71 722.88 780.31 951.9 370.3 770.83 621.21 True False 854.4044321892882 658.5335159950104 619.298215862523 611.737476968412 545.5015136396195 716.9931049500998 810.0051240520164 932.9136077488961 354.7375787529377 722.1596622493291 544.8051081746415 1.5682753692452571 1.2087506268093071 1.1367334971169214 1.122855618990112 1.0012782652998817 1.3160542994032685 1.4867796059510567 1.712380434307241 0.6511274828928802 1.3255376122828775 1.0 9.089596420113832 -8.780452877644958 24.999993568161845 0.835254635939439 1.2977259155759127 0.17472381971551865 0.25847991440931367 162.0337670643855 213050.03488912593 0.0416434519336817 0.044367198670023984 1.657857209956214e-09 8.780452877644958 0.4624712796364736 KGGSYTQAASSDS(ph)AQGSDVSLTACKV ddPTM_A549_PD325901_60min_R1 1 KGGSYTQAASSDSAQGSDVSLTACKV 26 2 Q5SUL5;Q5SRN5;A0A0G2JIF2;P04439;P04439-2 Q5SUL5 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain 1 KGGS(0.001)YT(0.001)QAAS(0.048)S(0.04)DS(0.695)AQGS(0.214)DVS(0.002)LTACKV 65.093 0.0017756 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KGGSYTQAASSDSAQGSDVS(ph)LTACK ddPTM_A549_MK2206_60min_R1 1 KGGSYTQAASSDSAQGSDVSLTACK 25 1 Q5SUL5;Q5SRN5;A0A0G2JIF2;P04439;P04439-2;A0A1W2PS24;A0A0G2JL56 Q5SUL5 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain 1 KGGSYTQAASSDSAQGS(0.008)DVS(0.946)LT(0.046)ACK 99.446 8.1446e-10 2804100.0 2840.6 2553.1 2076.5 1969.1 3451.6 2844.2 2338.0 2858.7 3967.7 4011.1 3633.1 True False 3320.0238339977864 2683.041884828201 2370.9789240964906 2451.529588396258 2943.8742123068705 3145.171356172839 2762.7843364378077 3263.9294794015796 3069.0222851149365 3104.989724170064 2730.901001541002 1.215724712146047 0.9824749719283874 0.8682039088046716 0.897699911865315 1.077986426694227 1.1516973168921432 1.0116750240593908 1.1951841086732176 1.1238130871031715 1.1369836264360993 1.0 11.415161300275868 -6.807500608824997 24.909745352395248 1.0749389112726109 0.9816420055466494 0.18632597064191492 0.10042017811918327 171.95651029562094 92992.87657209366 0.014980558785204165 0.028310665519005414 1.5577558510567555e-07 6.807500608824997 -0.0932969057259615 KGGSYTQAASSDSAQGSDVS(ph)LTACK ddPTM_A549_PD325901_60min_R1 1 KGGSYTQAASSDSAQGSDVSLTACK 25 1 Q5SUL5;Q5SRN5;A0A0G2JIF2;P04439;P04439-2;A0A1W2PS24;A0A0G2JL56 Q5SUL5 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain 1 KGGSYTQAASSDSAQGS(0.007)DVS(0.977)LT(0.015)ACK 119.42 2.4398000000000002e-17 3781900.0 451.86 733.76 675.56 889.74 904.59 512.93 307.68 566.75 611.62 611.09 705.24 True False 497.7324945582494 795.5965303309445 721.4075640722932 944.6972190538487 841.0547190660853 508.7528681413994 319.38893076895624 555.4457266432262 585.9157383658431 572.5056731107283 618.4999508846995 0.8047413647265373 1.2863324066443769 1.1663825729337491 1.5274006371424251 1.35982988820459 0.8225592700754165 0.5163928150877034 0.8980529842382674 0.9473173563356827 0.9256357616388146 1.0 9.27262967041145 -7.263239724440627 24.968839989513 0.9203577782700465 1.2452320146826845 0.43012982253851484 0.20781058623718446 139.35073521584775 1932647.5604623398 0.032162445936789616 0.05305312678659488 5.454566935621211e-08 7.263239724440627 0.324874236412638 KGGSYTQAASSDSAQGSDVS(ph)LTACKV ddPTM_A549_MK2206_60min_R1 1 KGGSYTQAASSDSAQGSDVSLTACKV 26 2 Q5SUL5;Q5SRN5;A0A0G2JIF2;P04439;P04439-2 Q5SUL5 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain 1 KGGSYTQAASSDSAQGSDVS(0.984)LT(0.016)ACKV 125.71 2.236e-18 3711600.0 822.72 1018.7 1323.1 859.92 1265.4 1439.9 1480.1 858.13 1891.4 1524.2 1628.7 True False 961.5750224271833 1070.5474787804985 1510.7354753055943 1070.6004386032762 1079.2613362652435 1592.269262271736 1749.0150112752785 979.7725554129074 1463.0009199451542 1179.8821613971256 1224.2488401667529 0.7854408277782879 0.8744525162341025 1.234010134001695 0.8744957752685732 0.8815702338082175 1.3006091654167755 1.42864338841199 0.8003050713770365 1.195019241142088 0.9637600810276576 1.0 10.257681113923823 -7.226202723259847 24.919255445970837 1.1109993685279016 0.940714816892936 0.188878005065387 0.18993924646391633 858.581720410965 607186.5743028343 0.0276632268101466 0.04791284001189373 5.940148151664979e-08 7.226202723259847 -0.1702845516349656 KGGSYTQAASSDSAQGSDVS(ph)LTACKV ddPTM_A549_PD325901_60min_R1 1 KGGSYTQAASSDSAQGSDVSLTACKV 26 2 Q5SUL5;Q5SRN5;A0A0G2JIF2;P04439;P04439-2 Q5SUL5 HLA-A HLA class I histocompatibility antigen, A-3 alpha chain 1 KGGSYTQAASSDSAQGSDVS(0.981)LT(0.019)ACKV 153.48 5.4939e-34 6717300.0 1181.7 1326.8 1429.7 1386.4 1611.6 1723.0 1359.3 1703.3 1368.1 1532.7 1540.6 True False 1301.6653140784383 1438.6140924050048 1526.7280394845138 1472.0347792571488 1498.4067757181742 1708.9684592588292 1411.0289053375 1669.326345287 1310.6035146959052 1435.9250604277822 1351.1159666680396 0.9634001419496576 1.0647598932257034 1.1299755736360275 1.089495510061438 1.109014187296865 1.2648569785414367 1.0443432985380303 1.2355167035762984 0.9700155627114367 1.062769662894954 1.0 10.399935791566088 -8.80284013058573 24.999204631316154 0.9858406205285154 1.1135512028401644 0.21685095148268696 0.08241952423906053 111.79334598817985 67504.19539399595 0.013146243200817835 0.01399530926090288 1.5745623745664576e-09 8.80284013058573 0.127710582311649 KGHAVGDIPGVR ddPTM_A549_MK2206_60min_R1 2 KGHAVGDIPGVR 12 1 D6RD47;P62266 D6RD47 RPS23 40S ribosomal protein S23 0 ; 78.692 0.00030375 8044200.0 2087.12 2317.7 2464.2 1902.15 3465.5 2573.0 2491.0 2177.8 3395.2 3367.3999999999996 3244.7 False True 2439.3748308151307 2435.6610303028974 2813.6606138976986 2368.176835390758 2955.7295407200904 2845.27315218083 2943.5824559737302 2486.5098192327832 2626.1926210202964 2606.7020012391295 2438.9514408356754 1.0001735950836768 0.9986508913307226 1.153635356074836 0.9709815438471101 1.2118853582863247 1.1665968844406076 1.2069049045786453 1.0194995183589275 1.0767711800446773 1.068779786917765 1.0 11.252045319236135 -10.059330912247791 0.7612232758614811 1.0049685033424327 1.0940889733294579 0.04542505412256326 0.0840921411500859 0.918658504571974 1.0606935401227162 0.04134860536062284 0.017224237565480686 8.723064580511274e-11 10.059330912247791 0.08912046998702516 KGHAVGDIPGVR ddPTM_A549_PD325901_60min_R1 2 KGHAVGDIPGVR 12 1 D6RD47;P62266 D6RD47 RPS23 40S ribosomal protein S23 0 ; 86.911 8.8595e-05 12485900.0 2953.4 3153.2 2933.1 2492.5 3895.8 3460.8 3137.5 3020.0 3990.1000000000004 2952.4 3159.4 False True 3253.2269938218333 3418.931230156361 3132.1578041631324 2646.4560641217854 3622.1724477803837 3432.6163922245837 3256.8992794058786 2959.7637308558337 3822.4099729465174 2765.9849601402625 2770.8138290867214 1.1741052248516164 1.2339086784777826 1.1304107736446198 0.9551186861926682 1.307259408682205 1.238847719103523 1.175430570331524 1.068192925769896 1.379526091872585 0.9982572380375153 1.0 11.436094064093345 -5.751080754503568 24.67620980891074 1.1700349853929404 1.2040069057220921 0.0 0.12997202272099218 1245.6064385681607 2967191.000207315 0.020688924648630636 0.07821531843925963 1.7738596114649235e-06 5.751080754503568 0.03397192032915175 KGHEY(ph)TNIK ddPTM_A549_MK2206_60min_R1 1 KGHEYTNIK 9 1 Q06124;Q06124-1 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 KGHEY(0.965)T(0.035)NIK 63.816 0.0013130000000000001 2546700.0 701.09 687.6 762.78 577.33 1069.5 500.47 673.18 484.02 906.28 1127.8 1020.7 True False 819.4168519951796 722.5959030229412 870.9536738368993 718.7758759173286 912.1779667580835 553.4294032149006 795.4880922169394 552.6313172490828 701.0090270317729 873.029196708883 767.2320201130998 1.0680170150802453 0.9418218792750873 1.1351894225015655 0.9368429068059123 1.1889206170300566 0.7213325157275345 1.0368285881755488 0.720292301105496 0.9136858325183499 1.1378946313791587 1.0 9.58351912167195 -7.23914340094694 24.99972073067183 0.9299755243853818 1.0459016276207638 0.19147102650590675 0.13448823607920696 1045.1036058295988 1171839.7556890906 0.016657698201650566 0.028837259856283905 5.7657605064922874e-08 7.23914340094694 0.115926103235382 KGHEY(ph)TNIK ddPTM_A549_PD325901_60min_R1 1 KGHEYTNIK 9 1 Q06124;Q06124-1 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 KGHEY(1)TNIK 118.18 3.386e-05 3515800.0 923.64 990.39 1160.4 849.32 1235.0 1298.7 1093.4 904.75 1401.9 1133.3 1269.7 True False 1017.4072528521691 1073.853641074007 1239.1517220520604 901.7805674543299 1148.2578605187052 1288.1238177826128 1135.0099353314383 886.7040514873561 1342.9830182385717 1061.7432445898114 1113.5349492914513 0.9136733907629493 0.964364559691015 1.1128090077824138 0.8098358906724374 1.0311825966929447 1.1567879558717518 1.0192854171785553 0.7962965617303444 1.206053765167514 0.9534889275504148 1.0 10.120931123774044 -7.39900246421674 0.6617722832947965 1.0807091094483465 0.9591075762788362 0.0 0.12898307639116285 1.3425464460180179 1.1498083450696037 0.02800981942525126 0.07195476906787839 3.990226382738438e-08 7.39900246421674 -0.12160153316951028 KGLGGSDGEPAS(ph)GSPK ddPTM_A549_MK2206_60min_R1 2 KGLGGSDGEPASGSPK 16 1 Q9H6A9;Q9H6A9-3 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 KGLGGSDGEPAS(0.554)GS(0.446)PK;KGLGGSDGEPAS(0.81)GS(0.19)PK 95.958 2.2305e-06 13710400.0 3437.9 4039.8 3777.7 2927.3 4354.9 3230.3999999999996 3351.6000000000004 2780.3 5750.299999999999 5466.1 5387.9 True False 4018.133471414836 4245.408564619077 4313.434664849177 3644.4886314114915 3714.299978901148 3572.2387838340273 3960.542336186893 3174.41603931165 4447.8662313421955 4231.3042136286795 4049.935731524805 0.9921474654863238 1.0482656629765026 1.065062497479476 0.8998880162573192 0.9171256595478641 0.882048264624949 0.9779272064388401 0.7838188676926187 1.0982560036002273 1.0447830519116879 1.0 11.983683298697342 KGLGGSDGEPAS(ph)GSPK ddPTM_A549_PD325901_60min_R1 1 KGLGGSDGEPASGSPK 16 1 Q9H6A9;Q9H6A9-3 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 KGLGGSDGEPAS(0.561)GS(0.439)PK 88.396 5.2023e-06 11462000.0 1624.0 1447.5 1553.9 1247.0 2226.7 1931.8 1983.7 1772.7 1634.6 2005.6 2064.2 True False 1788.867284474388 1569.4859050016921 1659.3569983597856 1324.0243578575205 2070.304273697978 1916.068061286249 2059.190789022292 1737.3421078437539 1565.9034464746205 1878.9660737221632 1810.3164860419095 0.9881516841210356 0.8669676916179605 0.9166115489495525 0.7313772857211162 1.1436145500859398 1.0584160703720684 1.1374755767288642 0.9596897124006712 0.8649887787843795 1.037921318294101 1.0 10.822026221157996 -4.914643900734145 19.410591487542384 0.9517357476961552 2.6420990757318936 0.0 0.1194762542216163 2047.5600118853868 493940.07968342555 0.0162244672900457 9202.130465401964 1.2171836199150847e-05 4.914643900734145 1.6903633280357384 KGLGGSDGEPASGS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KGLGGSDGEPASGSPK 16 1 Q9H6A9;Q9H6A9-3 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 KGLGGSDGEPAS(0.004)GS(0.996)PK 131.18 1.7828e-10 12483000.0 2225.5 1903.1 2274.2 2639.6 2823.7 2362.5 2541.5 2307.5 2366.4 2558.6 2611.9 True False 2451.431121673491 2063.480915930031 2428.5408878755557 2802.642097033448 2625.373053236168 2343.2605832843783 2638.218173262162 2261.4751023012705 2266.948437377672 2397.0495593465916 2290.652858198269 1.070188838478862 0.9008265519346648 1.0601959520770614 1.223512365482515 1.1461243653048223 1.0229662582428525 1.1517319893409224 0.9872622532949195 0.9896516747460189 1.0464481995897057 1.0 11.161543123617719 -8.29698166763985 24.026024677263084 0.994387909645491 1.0800101834268212 0.1720506145712578 0.07907005307512208 454.5306575637017 307254.31525695615 0.013242800720231238 0.01601017606370698 5.0468260068459755e-09 8.29698166763985 0.08562227378133025 KGLPLGSAVSS(ph)PVLFSPVGR ddPTM_A549_MK2206_60min_R1 1 KGLPLGSAVSSPVLFSPVGR 20 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 KGLPLGS(0.001)AVS(0.176)S(0.824)PVLFSPVGR 76.691 0.00013422 2679100.0 1113.3 1310.4 1507.9 1369.7 2117.2 1796.8 1626.2 1317.2 2471.5 1839.4 2488.1 True False 1301.197822428266 1377.0937628290617 1721.7428941223689 1705.2765614881687 1805.76268463788 1986.9361833806884 1921.6594901262465 1503.91713375582 1911.7091961745011 1423.8782624812195 1870.2361019333812 0.6957398699999083 0.7363208107283743 0.9206018921046891 0.9117974782570589 0.9655265892745569 1.0623985823643693 1.0274956665309294 0.804132233465671 1.0221753254566344 0.7613361013667026 1.0 10.869004694661147 -5.713066688699899 1.018570254443178 0.9976096538190445 0.6244235482365691 0.38060312370733973 0.0976486979701175 0.402409323502992 0.5062105813530278 0.01005808860902782 0.13671096626417797 1.936124636777652e-06 5.713066688699899 -0.37318610558247545 KGLPLGSAVSSPVLFS(ph)PVGR ddPTM_A549_MK2206_60min_R1 2 KGLPLGSAVSSPVLFSPVGR 20 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 KGLPLGSAVSSPVLFS(1)PVGR;KGLPLGSAVS(0.001)S(0.012)PVLFS(0.987)PVGR 97.542 4.4678999999999994e-07 27863000.0 2211.2200000000003 2438.3 2429.0 2503.8 2872.5 3168.2 2330.84 2190.1800000000003 3523.3 3205.7 3512.5 True False 2584.4198768614324 2562.3990551786474 2773.4687245992654 3117.231112399854 2449.959055177739 3503.4568211190463 2754.32345711835 2500.644722144945 2725.278175553962 2481.5301435446568 2640.2493099316744 0.9788544843624306 0.9705140516616434 1.0504571345465246 1.1806578646470787 0.9279271642878075 1.3269416671904026 1.043205824070314 0.9471244676547829 1.0322048623599442 0.9398847806568975 1.0 11.366458449556395 -8.000731427780371 24.999520021194737 1.0097950231016406 1.0752400088844087 0.11888645920069851 0.10721804185730775 55.82041430650153 1907961.4723754735 0.015731453391637257 0.021597532909319348 9.983172427226891e-09 8.000731427780371 0.06544498578276814 KGLPLGSAVSSPVLFS(ph)PVGR ddPTM_A549_PD325901_60min_R1 2 KGLPLGSAVSSPVLFSPVGR 20 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 KGLPLGSAVSS(0.001)PVLFS(0.998)PVGR;KGLPLGSAVSSPVLFS(1)PVGR 131.42 3.4628000000000004e-17 48905000.0 3977.7 3596.2 4293.1 3772.5 4685.7 4484.6 4253.7 4913.6 4604.200000000001 4545.4 4366.799999999999 True False 4381.513175772027 3899.2643948649957 4584.455582507493 4005.5187570308703 4356.592596787451 4448.07890446439 4415.576881213955 4815.594393355372 4410.701485536795 4258.402668277183 3829.7112834259333 1.1440844626419124 1.018161450378798 1.197076030861102 1.0459061951656223 1.1375772935264683 1.1614658587227196 1.1529790510118887 1.2574301394980094 1.1517060057830593 1.1119383037323263 1.0 11.903019918151735 -10.60798262698819 0.9970700871126625 1.0036691150600905 1.1392965082504987 0.11671023602843777 0.06914819491638563 0.40412734759163726 0.744037586663613 0.03631361532713008 0.011039366449684191 2.4661379877796256e-11 10.60798262698819 0.13562739319040817 KGLTPSQIGVILR ddPTM_A549_MK2206_60min_R1 1 KGLTPSQIGVILR 13 1 P62277;J3KMX5 P62277 RPS13 40S ribosomal protein S13 0 86.291 7.5593e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KGLVGPELHDR ddPTM_A549_MK2206_60min_R1 1 KGLVGPELHDR 11 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 56.205 0.0049006 1091500.0 510.06 519.98 686.57 391.43 680.4 544.34 592.25 699.33 788.33 913.7 799.05 False True 596.145658230272 546.4447609858483 783.9359498757182 487.33036757196015 580.3140613204297 601.9416974963519 699.8541587918271 798.4621691083031 609.7745137043269 707.2945354077905 600.6238323418949 0.9925441285035894 0.9097953353852166 1.305202870187602 0.8113736773844094 0.9661855392213206 1.0021941606101752 1.1652121029946862 1.3293880897050254 1.015235295154294 1.177599850891656 1.0 9.230317910955689 -7.562831687219797 24.995693599588968 1.0490180375653917 0.997502424575112 0.053132854972995025 0.15081809985224842 572.7464917338323 358323.94380004186 0.02295249197956026 0.03404407884939169 2.7363289974497815e-08 7.562831687219797 -0.051515612990279736 KGLVGPELHDR ddPTM_A549_PD325901_60min_R1 1 KGLVGPELHDR 11 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 56.225 0.0048886 1045400.0 530.59 532.98 508.94 361.36 589.22 725.66 356.3 416.55 524.62 573.7 626.02 False True 584.4551062002864 577.8960950934729 543.4797289048388 383.68038649189504 547.835219898649 719.750465551806 369.8591914748412 408.24158347284686 502.5720458151934 537.4764840917459 549.0235086677437 1.0645356655464913 1.0525889801983002 0.9899024728898086 0.6988414529332833 0.9978356322628549 1.3109647477543303 0.6736673123020519 0.7435776010092587 0.9153925795176439 0.9789680689557032 1.0 9.100724115165926 KGNAEGS(ph)S(ph)DEEGKLVIDEPAKEK ddPTM_A549_PD325901_60min_R1 2 KGNAEGSSDEEGKLVIDEPAKEK 23 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 2 KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK 48.123999999999995 0.0035821 47351000.0 7939.7 8486.1 8386.0 8222.4 8890.1 8737.1 8170.1 8439.099999999999 8163.9 10286.8 10712.2 True False 8745.732499101783 9201.253428970535 8955.124389114591 8730.278973574714 8265.690045180036 8665.947954376275 8481.017626350262 8270.775530154124 7820.799673726996 9637.289692443723 9394.667310230669 0.9309251951453136 0.9794123756730045 0.953213572487296 0.9292802698896592 0.8798278610865559 0.9224326597429557 0.9027480533679512 0.8803691772190122 0.832472232966701 1.0258255427468774 1.0 13.19762635760292 -6.375141795203584 3.651117874286305 0.912247054077796 0.957147761020847 0.05791547957880283 0.05263843931080551 0.47721374913873277 11.496299862713075 0.008733680853096433 0.021640847193151593 4.215588438823924e-07 6.375141795203584 0.04490070694305093 KGNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A549_MK2206_60min_R1 1 KGNAEGSSDEEGKLVIDEPAK 21 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.892)S(0.108)DEEGKLVIDEPAK 211.33 8.2751e-68 37364000.0 2804.3 3347.5 2847.6 3008.2 4312.6 3079.7 3228.2 3205.0 4272.2 4349.3 4203.6 True False 3277.5972814475767 3517.873451671461 3251.4324990402934 3745.209135043231 3678.2222528666744 3405.591809860592 3814.722153502368 3659.31856490085 3304.5535213015182 3366.7901092799634 3159.7301065420056 1.037302924911699 1.1133461824438562 1.029022223229897 1.1852939994112253 1.1640938082816523 1.0778109822764756 1.2072936690397216 1.1581111175680736 1.0458341092043482 1.0655309142731064 1.0 11.625585618196602 -8.928759310568346 4.112454112830699 1.0192308851088012 1.1229521906538573 0.3008882462058098 0.05637681701872764 0.1552328371608453 4.866788643714247 0.009965083011118382 0.010393964791514406 1.1782587929334488e-09 8.928759310568346 0.1037213055450561 KGNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A549_PD325901_60min_R1 3 KGNAEGSSDEEGKLVIDEPAK 21 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.828)S(0.172)DEEGKLVIDEPAK;KGNAEGS(0.972)S(0.028)DEEGKLVIDEPAK;KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAK 184.4 4.5187e-45 81284000.0 11811.5 12202.7 13107.9 11081.9 14349.0 11150.7 11491.5 12061.3 12117.599999999999 12862.0 14360.599999999999 True False 13010.594784833263 13231.064354379383 13997.480918205954 11766.403794179032 13341.175741362682 11059.892396202802 11928.815320890082 11820.72790959319 11608.339412089099 12049.891124957347 12594.337239343784 1.0330511671697278 1.05055661945009 1.1114106802284802 0.9342614518389781 1.059299547711477 0.8781639070019907 0.9471570511567167 0.9385748281113281 0.9217110191257623 0.9567705625123625 1.0 13.620487583664481 -6.269352831187733 24.93733801141349 0.9586850712056648 1.0635612031851494 0.5226031681311596 0.046911898665180134 358.5115493550319 1129764.8466853125 0.006852559482926008 0.016193475685080415 5.378326569059459e-07 6.269352831187733 0.10487613197948453 KGNAEGS(ph)SDEEGKLVIDEPAKEK ddPTM_A549_MK2206_60min_R1 2 KGNAEGSSDEEGKLVIDEPAKEK 23 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK;KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK 148.31 4.3205e-28 78459000.0 11572.5 12106.6 10963.699999999999 8839.9 14520.6 12390.7 10226.0 10836.800000000001 13931.6 15057.5 14085.3 True False 13525.655079539314 12722.774228530458 12518.517519921365 11005.675896838187 12384.638975322508 13701.875649719013 12083.931832511995 12372.949586308127 10776.114844193678 11656.00029211207 10587.531275496267 1.2775079220632886 1.2016752439708005 1.1823830498516839 1.0394940624458577 1.1697381243147267 1.2941520825946056 1.1413361168036396 1.168634053052955 1.0178118546987311 1.100917672761795 1.0 13.370078610824677 -8.753442702761516 3.9426150914082294 1.0073105435993452 1.183212505280087 0.4472418166791071 0.06941017537400454 0.10637653493199446 3.6110925533712974 0.011299769469271135 0.012382604509701169 1.764238508227086e-09 8.753442702761516 0.1759019616807418 KGNAEGS(ph)SDEEGKLVIDEPAKEK ddPTM_A549_PD325901_60min_R1 4 KGNAEGSSDEEGKLVIDEPAKEK 23 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.774)S(0.226)DEEGKLVIDEPAKEK;KGNAEGS(0.97)S(0.03)DEEGKLVIDEPAKEK;KGNAEGS(0.832)S(0.168)DEEGKLVIDEPAKEK;KGNAEGS(0.834)S(0.166)DEEGKLVIDEPAKEK 131.5 8.724600000000001e-23 305088000.0 13488.9 16628.1 14805.400000000001 18104.7 17883.1 13415.2 14789.199999999999 14564.2 20132.9 16453.699999999997 16502.9 True False 14858.283197996656 18029.40834332202 15810.183476102691 19222.98620024301 16627.052749345796 13305.951058995379 15352.011098960771 14273.705605606123 19286.784227045682 15414.810573993991 14473.14792050239 1.0266103324314602 1.2457143699735078 1.0923804249734974 1.3281828048625197 1.148820756940667 0.9193543196049574 1.0607237059474395 0.9862198385595341 1.3325908318621125 1.0650627395411099 1.0 13.821091122799421 -4.888581234504207 8.285893006717737 1.1384933516907174 0.08905391088119566 0.0173300202283988 0.1311544172260788 10339.397646926076 33207.38963398763 0.020708685647146202 176958.79915722657 1.2924649234606026e-05 4.888581234504207 -1.0494394408095218 KGNAEGSS(ph)DEEGKLVIDEPAK ddPTM_A549_MK2206_60min_R1 2 KGNAEGSSDEEGKLVIDEPAK 21 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.406)S(0.594)DEEGKLVIDEPAK;KGNAEGS(0.456)S(0.544)DEEGKLVIDEPAK 179.99 8.646299999999999e-37 39017800.0 4604.1 4981.9 5241.5 5149.299999999999 6765.0 5532.9 5194.3 5782.7 6935.299999999999 6783.5 8424.5 True False 5381.159520562274 5235.45743058463 5984.823515844816 6410.878731160862 5769.877461541312 6118.387805558226 6138.037073891753 6602.41543377602 5364.465623398345 5251.102638654641 6332.464145628295 0.8497733894438602 0.8267646385647522 0.9451018400122364 1.012382949785306 0.9111583309199828 0.9661938330566215 0.9692967749575387 1.0426297381145204 0.8471371491462417 0.8292352736461702 1.0 12.628551288092845 -5.765141912574713 24.83931950304182 0.9448403506621005 0.8382689934734733 0.3122360492611367 0.06218092502234851 74.9838021335111 503065.9954353115 0.008954023050818449 0.029504135110747832 1.7173471251907292e-06 5.765141912574713 -0.1065713571886272 KGNEAVAS(ph)R ddPTM_A549_PD325901_60min_R1 1 KGNEAVASR 9 1 Q8NBJ4-2;Q8NBJ4 Q8NBJ4-2 GOLM1 Golgi membrane protein 1 1 KGNEAVAS(1)R 62.924 0.002911 5884200.0 2170.8 1900.3 1698.4 1428.9 1605.2 1185.6 986.17 1308.3 1489.3 1776.9 1976.2 True False 2391.1780179415027 2060.4449501034305 1813.663637308876 1517.1599077326457 1492.4562896393734 1175.9448666844278 1023.69923900293 1282.2049301585055 1426.7099001802596 1664.7062307523488 1733.1399281639488 1.3796797241147547 1.1888508923144028 1.0464611701781243 0.8753822372206798 0.8611285594351574 0.6785054383521119 0.5906616207771608 0.7398161621703828 0.8231937173657325 0.9605146149485476 1.0 10.759172422436958 -5.727810284930538 1.3949173858442678 0.8543752270923731 1.4033664149639198 0.7115035692103262 0.11696642546941786 0.33139325082796955 0.968321606951329 0.021204748429548625 0.2000736139202514 1.8714994984809134e-06 5.727810284930538 0.5489911878715467 KGNEAVAS(ph)RDLSENNDQR ddPTM_A549_MK2206_60min_R1 4 KGNEAVASRDLSENNDQR 18 2 Q8NBJ4-2;Q8NBJ4 Q8NBJ4-2 GOLM1 Golgi membrane protein 1 1 KGNEAVAS(0.997)RDLS(0.003)ENNDQR;KGNEAVAS(0.996)RDLS(0.004)ENNDQR;KGNEAVAS(0.994)RDLS(0.006)ENNDQR;KGNEAVAS(0.983)RDLS(0.017)ENNDQR 106.45 9.6533e-10 44794300.0 4995.67 5447.14 5971.44 5354.03 5883.74 5276.5 4858.52 4848.6900000000005 6793.599999999999 8284.5 9272.1 True False 5838.816963594913 5724.376159383923 6818.279983870337 6665.767590351538 5018.249640143251 5834.855727742768 5741.25019429847 5536.006655990361 5254.860447149941 6413.025696164864 6969.58167305836 0.8377571621214319 0.8213371229312215 0.9782911376484911 0.9564085626715235 0.720021641979147 0.8371888014883314 0.8237582201657622 0.7943097470814308 0.7539707106759576 0.9201449953524584 1.0 12.76685635017961 -10.973268442919945 1.2590709350440175 0.9994433138772727 0.8299883659427609 0.26778788000996556 0.07542025230318791 0.37902009979481743 1.0743735658004763 0.05449561538789974 0.012752666690733255 1.0634854611896457e-11 10.973268442919945 -0.16945494793451177 KGNEAVAS(ph)RDLSENNDQR ddPTM_A549_PD325901_60min_R1 1 KGNEAVASRDLSENNDQR 18 2 Q8NBJ4-2;Q8NBJ4 Q8NBJ4-2 GOLM1 Golgi membrane protein 1 1 KGNEAVAS(0.996)RDLS(0.004)ENNDQR 93.09299999999999 1.3944e-06 13949000.0 1474.8 1707.9 1763.9 2473.7 2359.1 2539.7 2522.6 2121.0 2223.6 2556.8 2679.8 True False 1624.5206103096232 1851.8307268755702 1883.6088611923722 2626.494830819685 2193.4049544531817 2519.0175252348527 2618.5989234196863 2078.694991107689 2130.1498247772947 2395.3632116537833 2350.2015886518325 0.6912260710544034 0.7879454834075968 0.8014669338526335 1.1175615077029817 0.9332837510808614 1.071830406973667 1.1142018353080159 0.8844751876370357 0.9063689834365366 1.01921606351558 1.0 11.198568793994882 -6.081974551565852 6.333578466654424 0.9764135714752289 0.7522217878286735 0.6420475247035238 0.08018288289343763 0.12244470072305692 7.713572452985372 0.011600999290693793 0.031350326415705156 8.279906802140117e-07 6.081974551565852 -0.22419178364655534 KGNS(ph)PNSEPPTPK ddPTM_A549_MK2206_60min_R1 2 KGNSPNSEPPTPK 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KGNS(0.684)PNS(0.316)EPPTPK;KGNS(0.919)PNS(0.081)EPPTPK 132.64 1.4014e-08 62682000.0 12171.099999999999 13699.5 12631.599999999999 11516.099999999999 18759.5 13516.099999999999 13003.7 12731.2 19081.2 18823.0 20585.9 True False 14225.28412517441 14396.746034704467 14422.950819945689 14337.545016977372 16000.002400559379 14946.364730738938 15366.303967380818 14535.886587664805 14759.338666415088 14570.871226858742 15473.852888063333 0.9193110615745818 0.9303918124884233 0.9320853005570242 0.9265659380823945 1.0340024889923778 0.9659110008903274 0.9930496353131624 0.93938379101936 0.9538244142026562 0.9416446784303373 1.0 13.917544842685738 -2.0000000000000027 0.2872845316436851 0.9816862062454476 0.42498716619711274 0.230888217504284 0.030587805596317415 40.801073840786515 0.5088325500209867 0.010791223974657635 11.698266320919409 0.00999999999999994 2.0000000000000027 -0.5566990400483348 KGNS(ph)PNSEPPTPK ddPTM_A549_PD325901_60min_R1 4 KGNSPNSEPPTPK 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KGNS(0.987)PNS(0.013)EPPTPK;KGNS(0.94)PNS(0.06)EPPTPK;KGNS(0.969)PNS(0.031)EPPTPK;KGNS(0.979)PNS(0.021)EPPTPK 155.1 1.0558e-18 102182000.0 17691.7 17068.0 16985.0 17516.8 19703.1 19280.9 18584.300000000003 19826.8 19987.3 18502.6 21375.9 True False 19487.74836005883 18506.380260151203 18137.704239102244 18598.77295246078 18319.22222800494 19123.882742962014 19291.535706219176 19431.33892017629 19147.303288708044 17334.342678326528 18746.799812994523 1.0395240016672453 0.987175434994688 0.9675093573320136 0.9921038864227303 0.9771919693358434 1.020114522677418 1.0290575404153548 1.036514984637926 1.0213638316784024 0.9246560933728574 1.0 14.194356719799806 -7.274565687106493 24.39412199942465 1.0147329719853908 0.9909612567713685 0.0 0.03329898539029966 645.6271267158872 1199840.9306309633 0.0030711158985825956 0.004929919185015927 5.3141561673492807e-08 7.274565687106493 -0.023771715214022326 KGNSPNS(ph)EPPTPK ddPTM_A549_PD325901_60min_R1 2 KGNSPNSEPPTPK 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KGNS(0.095)PNS(0.905)EPPTPK;KGNS(0.04)PNS(0.96)EPPTPK 85.77 0.00011475 12780300.0 2471.8 2326.0 2557.3 2636.7 2939.7 3010.6000000000004 2437.4 2947.1000000000004 2438.8 3025.1 3257.7 True False 2722.7353163570147 2522.0201830977094 2730.8537562941497 2799.5629706198247 2733.225613414444 2986.082671761248 2530.1565907964573 2888.3177785447747 2336.3057171554533 2834.094669733204 2857.023552261764 0.9529971547492354 0.8827439245648329 0.9558387273819524 0.9798879566125905 0.9566689120398342 1.0451725780829892 0.8855917861767214 1.0109534365785107 0.817741147183024 0.9919745559988791 1.0 11.480297214037945 KGNYAER ddPTM_A549_MK2206_60min_R1 2 KGNYAER 7 1 Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;Q8IUE6;Q93077 Q99878;Q93077 HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST2H2AB;HIST1H2AC Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A type 2-B;Histone H2A type 1-C 0 ; 62.2 0.027739999999999997 231100000.0 3401.7 3477.1 3173.6 2921.1000000000004 3737.2 3205.0 3289.7 3637.5 4595.4 4881.9 4702.4 False True 3975.8237964198643 3654.0695381051023 3623.664201065553 3636.7696311331624 3187.462830638904 3544.150972693182 3887.3959074334716 4153.1267643765495 3554.5492373458605 3779.0753993731973 3534.6643003623385 1.1248094468298737 1.0337812102072956 1.0251791664328889 1.0288868537700615 0.9017724343191961 1.00268389626983 1.099792109546294 1.1749706369430366 1.0056256932183019 1.0691469056865752 1.0 11.787357488324716 -11.749477195557324 0.006103356237683851 1.770022975913007e-05 2.0044823205459634 0.0 0.07231278283443981 34233.67207943355 32.71012711351281 5611.923141776512 5138.704441617561 1.780421394848538e-12 11.749477195557324 2.004464620316204 KGNYAER ddPTM_A549_PD325901_60min_R1 2 KGNYAER 7 1 Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;Q8IUE6;Q93077 Q99878;Q93077 HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST2H2AB;HIST1H2AC Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A type 2-B;Histone H2A type 1-C 0 ; 68.22399999999999 0.023165 381310000.0 9812.2 8974.900000000001 7575.2 7954.599999999999 9684.4 8171.4 8070.8 7934.799999999999 9192.0 9441.2 10599.3 False True 10808.32732064014 9731.246320414293 8089.2986253781155 8445.937575792641 9004.20115336628 8104.854827619036 8377.93871051122 7776.5341892698225 8805.692206041052 8845.081020754731 9295.653294498608 1.1627291787051448 1.0468598614982207 0.8702237883770426 0.9085899945075566 0.9686464058093888 0.8718972804650196 0.9012748695639806 0.8365774779780312 0.9472913766321807 0.9515287135321047 1.0 13.182340545354256 -5.49817968142317 3.9283255557089665 0.9435243012411201 1.1489300736651353 0.6596514765905219 0.0518497873671147 0.12440189298067325 4.062581788712769 0.008519087231225759 0.05082246625496265 3.175559968790227e-06 5.49817968142317 0.20540577242401525 KGNYSER ddPTM_A549_PD325901_60min_R1 2 KGNYSER 7 1 A0A0U1RR32;A0A0U1RRH7;P20671;A0A3B3IS11 A0A0U1RR32 HIST1H2AD Histone H2A type 1-D 0 ; 69.825 0.021949 20922200.0 8371.0 8347.6 6428.5 6779.799999999999 6614.4 6425.1 5507.0 6113.2 6789.9 8947.8 9717.7 False True 9220.817757595501 9051.081547904752 6864.776667710846 7198.572847957028 6149.827362441239 6372.776115835115 5716.571898546032 5991.2674302873775 6504.54411551329 8382.8343809589 8522.48450557575 1.0819401022745039 1.062023819695204 0.8054900731376671 0.8446566072660424 0.7216002984127193 0.7477603639720072 0.6707635425803381 0.7029954030855263 0.7632215830087761 0.9836139186260198 1.0 13.057058356117441 -5.7558499925037 23.61081002735191 0.8317593873616254 1.0719822568079345 0.481672118371975 0.10392635960442016 56.223236655558175 237482.5599350636 0.017736231349927006 0.06482489633620801 1.7544864056151069e-06 5.7558499925037 0.2402228694463091 KGPAS(ph)PTRPAAPR ddPTM_A549_MK2206_60min_R1 3 KGPASPTRPAAPR 13 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.5)PT(0.5)RPAAPR;KGPAS(0.904)PT(0.096)RPAAPR;KGPAS(0.845)PT(0.155)RPAAPR 116.95 3.2944e-06 1252750000.0 11398.8 11972.4 10288.2 10709.199999999999 13355.0 10864.2 10401.7 11315.7 14782.599999999999 16052.9 15283.199999999999 True False 13322.638766096588 12581.744021745002 11747.221462503983 13332.954480754253 11390.497191261526 12013.842432927695 12291.554248214354 12919.73512787787 11434.364702961435 12426.538740776756 11487.959645138155 1.1597045234864567 1.0952113700251158 1.0225681344097992 1.1606024823038896 0.9915161214970079 1.0457768658694846 1.069951029416811 1.1246327047593399 0.9953346857203313 1.0817011135685717 1.0 13.487834965938188 -2.00000000000587 0.13384763034906058 0.9677926323400589 1.5141033043670773 0.06517351635564717 0.05789164232780067 53.025892633528166 0.45788071573372735 0.1291095327326904 5.53640031485969 0.00999999999986484 2.00000000000587 0.5463106720270184 KGPAS(ph)PTRPAAPR ddPTM_A549_PD325901_60min_R1 8 KGPASPTRPAAPR 13 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.855)PT(0.145)RPAAPR;KGPAS(0.867)PT(0.133)RPAAPR;KGPAS(0.837)PT(0.163)RPAAPR;KGPAS(0.946)PT(0.054)RPAAPR;KGPAS(0.969)PT(0.031)RPAAPR;KGPAS(0.988)PT(0.012)RPAAPR;KGPAS(0.969)PT(0.031)RPAAPR;KGPAS(0.965)PT(0.035)RPAAPR 132.4 7.092000000000001e-09 3163270000.0 33587.5 34293.3 34153.5 31166.2 40074.5 30583.399999999998 33010.299999999996 33876.50000000001 34277.4 35376.3 39590.3 True False 36997.27827418935 37183.316743346804 36471.36189167961 33091.26539042424 37259.80536951972 30334.33893029394 34266.52503042928 33200.80663189988 32836.84008086941 33142.634380642885 34720.94408358932 1.0655608380094692 1.0709189431551578 1.0504138886280348 0.9530635258868051 1.073121896680522 0.8736611210013531 0.9869122495037564 0.9562184297745544 0.9457358072354255 0.9545430072653925 1.0 15.083518555620874 -6.18675120993254 1.2331665386988306 0.9698224725325663 1.07765880512696 0.44995177237967 0.045847479473848526 0.3786914611237129 1.0001092670706915 0.006593739118377383 0.03343181182681597 6.505022305294952e-07 6.18675120993254 0.10783633259439374 KGPAS(ph)PTRPAAPRPAEAPLLDL ddPTM_A549_MK2206_60min_R1 4 KGPASPTRPAAPRPAEAPLLDL 22 3 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.5)PT(0.5)RPAAPRPAEAPLLDL;KGPAS(0.956)PT(0.044)RPAAPRPAEAPLLDL;KGPAS(0.943)PT(0.057)RPAAPRPAEAPLLDL;KGPAS(0.957)PT(0.043)RPAAPRPAEAPLLDL 138.71 5.2848e-23 1037005500.0 5854.42 7151.6 7567.799999999999 6471.740000000001 10182.8 7922.299999999999 7934.9 6728.389999999999 10786.0 10115.599999999999 10721.400000000001 True False 6842.502969173177 7515.5858930466375 8641.027836155754 8057.316590527448 8684.923609073596 8760.632527602873 9376.568618990745 7682.159887330177 8342.988221702677 7830.478934410685 8058.980484413228 0.8490531752009048 0.9325727872877266 1.0722234472298644 0.9997935354367717 1.0776702618738185 1.0870646162435436 1.1634931536471453 0.953242150441752 1.0352411496514657 0.9716463452859223 1.0 12.976381624269738 -5.545171148326874 3.622495479453441 1.032835530911581 0.8594895253585154 0.5175733954280086 0.05746280976308886 0.13106875414862176 3.5258129784588967 0.007674680364948759 0.042179606085418084 2.849894949356028e-06 5.545171148326874 -0.17334600555306567 KGPAS(ph)PTRPAAPRPAEAPLLDL ddPTM_A549_PD325901_60min_R1 3 KGPASPTRPAAPRPAEAPLLDL 22 3 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.907)PT(0.093)RPAAPRPAEAPLLDL;KGPAS(0.5)PT(0.5)RPAAPRPAEAPLLDL;KGPAS(0.858)PT(0.142)RPAAPRPAEAPLLDL 121.72 2.8078000000000004e-15 2135540000.0 9939.2 10014.2 11962.900000000001 11316.4 12111.1 12239.8 11514.099999999999 12864.2 12338.9 12361.7 13524.7 True False 10948.220267147688 10858.131778837958 12774.774332761632 12015.388326590895 11260.4581170268 12140.123126892755 11952.27537625728 12607.613439230327 11820.338942680579 11581.180152339077 11861.247640137115 0.923024339370519 0.9154291444093346 1.0770177573506894 1.01299531812591 0.9493485389279529 1.0235114800075464 1.0076743812187292 1.0629247294835658 0.996551062864744 0.9763880245742175 1.0 13.533968149093532 -5.726576573454651 24.990978260861958 1.0065798414155407 0.9192265271674038 0.518002050585661 0.03414537416259617 104.28095317411741 74751.14907252124 0.00434293793796463 0.016818542429595865 1.8768234735126081e-06 5.726576573454651 -0.08735331424813686 KGPASPT(ph)RPAAPR ddPTM_A549_MK2206_60min_R1 1 KGPASPTRPAAPR 13 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.433)PT(0.567)RPAAPR 119.47 4.1682e-06 556340000.0 4927.2 4043.5 4271.3 3927.9 5513.9 4805.7 4206.1 4549.1 5309.8 5575.5 5520.2 True False 5758.790901525691 4249.296878815102 4877.0345670567485 4890.235676330133 4702.812614219162 5314.235984234519 4970.293925359741 5193.948856034463 4107.138778008241 4315.99067764708 4149.381990230558 1.3878671366204363 1.0240794626331795 1.175364085191337 1.1785455491549985 1.1333766390492896 1.280729515081169 1.1978395667263138 1.251740347903198 0.9898193966422529 1.0401526511198032 1.0 12.018680761838803 -8.770357290397628 24.99349098138188 0.9951924727408918 1.1959520583446912 0.49188366240749115 0.08706875668138 97.20578221579309 272429.66991125396 0.013652881004632083 0.014638331488246979 1.6968470963163818e-09 8.770357290397628 0.20075958560379936 KGPASPT(ph)RPAAPRPAEAPLLDL ddPTM_A549_MK2206_60min_R1 1 KGPASPTRPAAPRPAEAPLLDL 22 3 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.417)PT(0.583)RPAAPRPAEAPLLDL 117.08 2.5015e-15 1007500000.0 2095.9 2260.8 2479.0 1750.9 3043.0 2419.3 2119.3 1472.1 2942.0 3347.2 3141.1 True False 2449.6366801647378 2375.8650633424454 2830.5594764436337 2179.870578600888 2595.3787310377243 2675.308720198633 2504.3493773364617 1680.7746831171742 2275.641697408609 2591.0651952686385 2361.0781800502173 1.0375076525897322 1.0062627673311155 1.198841910598416 0.9232521807280964 1.09923455858735 1.133087732038476 1.0606804122357343 0.7118674414590652 0.9638146320763546 1.0974076238396857 1.0 11.20523009755578 -8.047447071816203 24.999986156328145 0.9584955694747572 1.067330409716203 0.22243241187444862 0.10866431523644886 472.0144933813269 248704.72667641225 0.01588961683428255 0.020513737119453725 8.965054378867273e-09 8.047447071816203 0.10883484024144585 KGPASPT(ph)RPAAPRPAEAPLLDL ddPTM_A549_PD325901_60min_R1 3 KGPASPTRPAAPRPAEAPLLDL 22 3 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.412)PT(0.588)RPAAPRPAEAPLLDL;KGPAS(0.436)PT(0.564)RPAAPRPAEAPLLDL;KGPAS(0.451)PT(0.549)RPAAPRPAEAPLLDL 130.78 4.2107000000000003e-22 1984388900.0 4569.0 4794.4 4514.9 5153.9 6544.3 5863.700000000001 5959.9 5422.299999999999 5334.9 5507.6 5189.299999999999 True False 5032.8415164799735 5198.440913948263 4821.308264299246 5472.244697643843 6084.650944609364 5815.947971303542 6186.707255882418 5314.1479727879405 5110.692705614494 5159.849196067105 4551.048997683015 1.1058640588229756 1.1422511417905723 1.0593839501077273 1.2024139270813867 1.3369776831027576 1.2779356966414774 1.3594024716130575 1.1676754030759562 1.1229702664630505 1.1337714005483213 1.0 12.15198340345199 -9.414393619458835 1.039680357879141 1.0273016070560534 1.2090378624970906 0.2264682400045367 0.09408100028756491 0.34136955916108785 0.7742863589419402 0.026560743410471956 0.02030741627442931 3.851291406041714e-10 9.414393619458835 0.1817362554410371 KGPDEAEESQYDS(ph)GIESLR ddPTM_A549_MK2206_60min_R1 1 KGPDEAEESQYDSGIESLR 19 1 H3BNC2;Q7LC14;O00221 H3BNC2 NFKBIE NF-kappa-B inhibitor epsilon 1 KGPDEAEES(0.004)QY(0.115)DS(0.692)GIES(0.189)LR 51.348 0.0061305 3440200.0 1013.0 1475.8 1001.5 1032.1 1791.5 1269.9 1337.4 1397.6 1976.1 2095.2 2417.1 True False 1183.96963452783 1550.9119163485414 1143.5277594426368 1284.964546332729 1527.9727231856994 1404.2799751086036 1580.3882684139967 1595.7140799704916 1528.5165051832612 1621.8928648204026 1816.8673614336947 0.6516544133378875 0.8536186786495591 0.6293952897806894 0.7072418018004133 0.8409929946564576 0.7729127645292074 0.8698424012454647 0.8782776959080324 0.8412922911318661 0.8926864443976597 1.0 10.827237385584374 -14.999999999934241 0.04190685444000812 2.0855408905817536 0.1753081559026153 0.5667097875242247 0.07005080310942974 207.43413429390705 0.6674194978426105 27.695270704920972 8.177981455872326 1.0000000001514156e-15 14.999999999934241 -1.9102327346791383 KGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPS(ph)PSADLLGLR ddPTM_A549_PD325901_60min_R1 1 KGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 45 3 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 KGPGAGSALDDGRRDPS(0.002)S(0.002)NDINGGMEPT(0.007)PS(0.035)T(0.035)VS(0.169)T(0.154)PS(0.57)PS(0.026)ADLLGLR 51.32899999999999 0.00077981 2237800.0 671.39 532.06 773.84 796.86 949.58 879.11 495.41 926.96 854.08 961.59 972.22 True False 739.5490185488048 576.8985634647324 826.3574358779442 846.0802323996339 882.8847766731595 871.950819627992 514.2630986487541 908.4710556139476 818.1859877432053 900.8750432940238 852.6431034103608 0.8673605821600999 0.6766002811226425 0.9691715473598738 0.9923029096412356 1.0354681497356157 1.022644546282501 0.6031399264144978 1.065476342892224 0.9595878797009726 1.0565675599682296 1.0 9.735798179048583 -5.779963902933101 24.49495132777587 0.9676037595551392 0.7719804731885651 0.2594766414392482 0.12716617400574123 151.25566748858313 200006.04895230217 0.016073406906279033 0.050113427306168676 1.6597248523385145e-06 5.779963902933101 -0.1956232863665741 KGPGEGVLT(ph)LR ddPTM_A549_MK2206_60min_R1 2 KGPGEGVLTLR 11 1 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 KGPGEGVLT(1)LR;KGPGEGVLT(1)LR 81.632 0.0004744 313560000.0 4666.6 4255.4 4085.0 3676.8 6044.6 5044.9 4387.2 4732.8 6963.0 6425.299999999999 7045.8 True False 5454.207992583982 4471.981683717022 4664.314425684648 4577.616165057826 5155.447347233205 5578.74796946641 5184.297451163366 5403.688893592123 5385.8916176261555 4973.820267435347 5296.133405812552 1.0298471686151147 0.8443861476013772 0.8807018381684877 0.8643317330401559 0.9734360810426446 1.0533624329295945 0.9788834710004763 1.0203083041038068 1.0169478759192683 0.9391418014464168 1.0 12.370723747721145 -6.932123554023548 5.272942960920673 1.0097973459235325 0.8994961196322699 0.42377020558361167 0.0520407679562623 0.10893326129889208 5.761910818019882 0.006260951036605617 0.01196188304031229 1.1691667231893587e-07 6.932123554023548 -0.1103012262912626 KGPGEGVLT(ph)LR ddPTM_A549_PD325901_60min_R1 4 KGPGEGVLTLR 11 1 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 KGPGEGVLT(1)LR;KGPGEGVLT(1)LR;KGPGEGVLT(1)LR;KGPGEGVLT(1)LR 106.52 9.598899999999999e-05 480710000.0 9351.099999999999 10233.2 10719.5 10719.0 10578.2 11398.8 11155.3 12324.2 12178.3 12328.0 11865.400000000001 True False 10300.416788084012 11095.58767741852 11446.989731590018 11381.088285384734 9835.223724808879 11305.9719520601 11579.821045914385 12078.384162852133 11666.488402179046 11549.607976090363 10406.031020967783 0.9898506709550489 1.066265097140428 1.1000341733101449 1.0937011683371158 0.9451464929319596 1.0864826300516468 1.1127990126669292 1.1607099900542885 1.121127582521279 1.1098955935090251 1.0 13.345132292738722 KGPGQPS(ph)SPQR ddPTM_A549_PD325901_60min_R1 3 KGPGQPSSPQR 11 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.5)S(0.5)PQR;KGPGQPS(0.5)S(0.5)PQR;KGPGQPS(0.5)S(0.5)PQR 50.675 0.010894 46520200.0 2118.81 1718.47 2039.83 1766.4899999999998 2186.0 1844.87 2153.34 1533.93 1671.54 1905.47 2329.3 True False 2333.910031414519 1863.2914978709885 2178.265130294254 1875.6020753101293 2032.4629012906007 1829.8459903846983 2235.286532052861 1503.3345628051945 1601.2909867369303 1785.1582990104555 2042.8108666492694 1.1424993226331943 0.9121213952260111 1.0663077849527813 0.9181476885261507 0.994934447663458 0.8957490976079016 1.0942209915494039 0.7359147081839478 0.7838664914503102 0.8738735083872792 1.0 10.996339923203022 KGPGQPS(ph)SPQRLDR ddPTM_A549_MK2206_60min_R1 1 KGPGQPSSPQRLDR 14 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.625)S(0.375)PQRLDR 58.09 0.0022191999999999997 328080000.0 3582.2 4552.8 4068.1 3769.6 6459.4 4365.9 4078.5 3479.9 6086.4 6319.7 6036.6 True False 4186.787783618555 4784.518073418916 4645.017751561248 4693.152169223775 5509.230816715437 4827.896640150131 4819.510657040891 3973.1864817467936 4707.840117983602 4892.075380777727 4537.545618315602 0.9226987750203043 1.0544286440022599 1.0236850805007534 1.0342931099755943 1.2141433453534154 1.0639885625970436 1.0621404306299753 0.8756245812073387 1.0375300909329954 1.0781324954687137 1.0 12.147696432010004 KGPGQPS(ph)SPQRLDR ddPTM_A549_PD325901_60min_R1 1 KGPGQPSSPQRLDR 14 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.59)S(0.41)PQRLDR 55.864 0.0031138999999999997 508660000.0 2638.6 2999.7 3467.7 2803.4 3842.0 4043.6 3866.2 4156.0 3554.8 3354.4 4178.6 True False 2906.468729565344 3252.495246448066 3703.0389749740825 2976.559651016657 3572.1511741804584 4010.6702622513085 4013.330356665817 4073.105319681072 3405.4041181499942 3142.6026115345153 3664.6586903278403 0.793107619336122 0.8875301962041922 1.0104730857330697 0.8122337992546788 0.9747568535122964 1.0944184987367853 1.0951443765440498 1.1114555716829095 0.9292554657649024 0.8575430557363524 1.0 11.839463123211914 -4.495172773428356 0.6833913653453444 0.9916430137397356 0.3620292209050368 0.3183013305483626 0.08976307983818684 6.649421049815639 1.0208919429125793 0.014284990671138288 4.155569696992695 3.1976227606822794e-05 4.495172773428356 -0.6296137928346988 KGPGQPSS(ph)PQR ddPTM_A549_MK2206_60min_R1 6 KGPGQPSSPQR 11 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.191)S(0.809)PQR;KGPGQPS(0.127)S(0.873)PQR;KGPGQPS(0.346)S(0.654)PQR;KGPGQPS(0.112)S(0.888)PQR;KGPGQPS(0.095)S(0.905)PQR;KGPGQPS(0.002)S(0.998)PQR 122.33 6.980700000000001e-06 893589400.0 8500.08 8565.67 7038.95 6835.62 10833.63 8697.26 8053.200000000001 7855.480000000001 9643.869999999999 10401.92 9949.18 True False 9934.685696996374 9001.626016065324 8037.178953897908 8510.347206862645 9240.017378222883 9617.598280426053 9516.362197690743 8969.018346398547 7459.548843095842 8052.119047552809 7478.524022601002 1.328428666802775 1.2036634486780178 1.0747012284253663 1.1379715009463565 1.2355402416704735 1.2860289345010474 1.2724920276957257 1.1993032741879401 0.9974627106300903 1.0766989613483 1.0 12.868537849508932 -8.748120225732732 6.074083706175719 0.9984813723907315 1.2148245837838463 0.5954736523816755 0.06981358558251521 0.06896771046326014 9.00469417614682 0.012010048367407329 0.013304809910657895 1.7859930899797403e-09 8.748120225732732 0.21634321139311474 KGPGQPSS(ph)PQR ddPTM_A549_PD325901_60min_R1 3 KGPGQPSSPQR 11 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.006)S(0.994)PQR;KGPGQPS(0.112)S(0.888)PQR;KGPGQPS(0.118)S(0.882)PQR 124.21 4.2781e-06 1348134000.0 5814.4 4722.29 5087.3 5167.3 6254.5 5704.7 4940.7 4763.1 5089.450000000001 5045.1 5219.4 True False 6404.673607664948 5120.253951178193 5432.554770420069 5486.472385210235 5815.205496853638 5658.24281458726 5128.721042154781 4668.096233920334 4875.558115539125 4726.551524997848 4577.446888502637 1.399180321185557 1.1185829297198286 1.1868089139527194 1.1985878850917604 1.2704037072412417 1.236113264099099 1.1204326706743013 1.0198034729021945 1.0651260919673946 1.0325737556605459 1.0 12.160327431386309 -7.97938607497231 2.8247452812355633 1.0308703075646386 1.2276192656581708 0.6773153525174596 0.06633952628011908 0.11848298824406471 1.9291079595171035 0.010415783103825007 0.014434280603462997 1.0486098310072241e-08 7.97938607497231 0.1967489580935322 KGPGQPSS(ph)PQRLDR ddPTM_A549_MK2206_60min_R1 2 KGPGQPSSPQRLDR 14 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.007)S(0.993)PQRLDR;KGPGQPS(0.207)S(0.793)PQRLDR 88.427 1.5707e-05 629080000.0 7461.780000000001 9585.800000000001 7672.299999999999 7586.6900000000005 11832.9 8141.9 7185.22 7199.57 12762.4 12657.2 12312.4 True False 8721.14604099415 10073.676275737802 8760.34750751048 9445.429390579458 10092.29608494784 9003.470453844187 8490.681467005852 8220.131095258415 9871.736777364938 9797.929729192827 9254.891275047055 0.942328308546208 1.0884705153585486 0.9465640651154963 1.0205878286270234 1.090482403846125 0.9728337358342883 0.9174263872659792 0.8881931565659178 1.066650756231034 1.0586758329198211 1.0 13.176000326311497 KGPGQPSS(ph)PQRLDR ddPTM_A549_PD325901_60min_R1 5 KGPGQPSSPQRLDR 14 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.252)S(0.748)PQRLDR;KGPGQPS(0.061)S(0.939)PQRLDR;KGPGQPS(0.132)S(0.868)PQRLDR;KGPGQPS(0.238)S(0.762)PQRLDR;KGPGQPS(0.253)S(0.747)PQRLDR 125.86 1.438e-07 1180123000.0 15032.78 14968.99 14094.829999999998 15426.150000000001 19201.6 17739.699999999997 16419.3 20782.699999999997 17455.8 16689.23 17774.9 True False 16558.896759052262 16230.479320974971 15051.389922898157 16378.988250171438 17852.945857923856 17595.23376477879 17044.145446485705 20368.172744787244 16722.193430179657 15635.46916959819 15588.69998437474 1.062237183065297 1.0411695226185325 0.9655320801596571 1.0506962265351723 1.14524917894492 1.128717197868667 1.0933654162033926 1.3065985467167363 1.072712506298862 1.003000197917102 1.0 13.928212999419786 -4.898828060859291 10.557573518773765 1.0650975171365469 1.0285869566426966 0.0 0.08966531103218939 21481880.171342846 66231565.53577358 0.012963994318899243 17046054.933845114 1.2623271966954519e-05 4.898828060859291 -0.036510560493850264 KGPGRPTGSK ddPTM_A549_PD325901_60min_R1 1 KGPGRPTGSK 10 2 P26583 P26583 HMGB2 High mobility group protein B2 0 39.148 0.037698 2525100.0 1520.7 1601.8 1250.0 1236.9 1532.0 1433.7 1259.9 1197.0 1382.7 1683.3 1622.3 False True 1675.080344519829 1736.789307517589 1334.8325168606293 1313.3005037962837 1424.3976051130826 1422.0244225417196 1307.8461839437332 1173.1248959716665 1324.589927468773 1577.0161507262253 1422.767384607011 1.177339572612223 1.2207120617944973 0.9381944872382139 0.9230605916363737 1.0011458095846932 0.999477804964234 0.9192269924749359 0.8245373830351759 0.9309954260967572 1.1084146064831393 1.0 10.474484092340745 -5.7622680945468705 24.999882049723205 0.9540382338879141 1.1990258628347727 0.6454989907641293 0.06801933912694937 7.288859567186525 219921.62252050193 0.007662258775477006 0.026043643351486987 1.7287488549258473e-06 5.7622680945468705 0.24498762894685866 KGPPTQELDRDS(ph)EEEEEEDDEDGEDEEEVPK ddPTM_A549_MK2206_60min_R1 2 KGPPTQELDRDSEEEEEEDDEDGEDEEEVPK 31 2 Q14687-2;Q14687-3;Q14687;H0Y613;H7C3B5 Q14687-2 GSE1 Genetic suppressor element 1 1 KGPPT(0.002)QELDRDS(0.998)EEEEEEDDEDGEDEEEVPK;KGPPTQELDRDS(1)EEEEEEDDEDGEDEEEVPK 279.72 9.939799999999996e-169 101794000.0 3251.9 2925.8 2914.2 2854.4 4140.1 3313.7 3754.5 3273.0 4798.6 4712.1 4576.0 True False 3800.741218678238 3074.710722897791 3327.4773804969864 3553.728128138887 3531.0967743573087 3664.353534543963 4436.644050964822 3736.9577731421145 3711.7247617895864 3647.6333373044204 3439.6529088248667 1.1049781240795993 0.8939014500588794 0.967387544237362 1.0331647472398584 1.026585201459668 1.065326540693277 1.2898522521217324 1.0864345537756075 1.0790986358730221 1.0604655277705357 1.0 11.748047276339134 -6.635123986510627 2.096910558393578 1.0638367167854796 0.981468550087132 0.17406245192330927 0.0854722647965545 0.5183063640247223 4.597349775095327 0.01357955188659282 0.033337083313965905 2.3167331525789455e-07 6.635123986510627 -0.08236816669834768 KGPPTQELDRDS(ph)EEEEEEDDEDGEDEEEVPK ddPTM_A549_PD325901_60min_R1 2 KGPPTQELDRDSEEEEEEDDEDGEDEEEVPK 31 2 Q14687-2;Q14687-3;Q14687;H0Y613;H7C3B5 Q14687-2 GSE1 Genetic suppressor element 1 1 KGPPTQELDRDS(1)EEEEEEDDEDGEDEEEVPK;KGPPTQELDRDS(1)EEEEEEDDEDGEDEEEVPK 267.29 2.0448999999999998e-153 242440000.0 4513.0 4187.0 3907.2 3372.3 5056.7 3603.1 3977.5 4057.8 3979.1 4331.6 4203.6 True False 4971.1564377049945 4539.85318427778 4172.36608790228 3580.5993119510144 4701.534836667967 3573.7575482039956 4128.865939071517 3976.8639957174796 3811.872264692991 4058.102036764519 3686.5838488158975 1.3484452386188617 1.2314525779024248 1.1317702943993562 0.9712512881271033 1.275309345853632 0.9693954334856263 1.1199707122890143 1.0787396025170615 1.0339849630484697 1.1007757325438157 1.0 11.848068855112132 -2.0000000000002065 0.3563133121484722 1.0192232175995632 4.951247866471886 0.48758490479238603 0.08558238604432399 25.935941697178393 0.31717422363341446 0.019295172472642775 69.96931504773731 0.009999999999995245 2.0000000000002065 3.9320246488723223 KGPQASS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KGPQASSPR 9 1 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 KGPQAS(0.105)S(0.895)PR;KGPQAS(0.115)S(0.885)PR 48.44 0.013517 13074000.0 2441.0 1616.92 1775.79 1417.2800000000002 2299.48 1680.23 1216.21 1552.83 2049.6 3012.6000000000004 3158.5 True False 2852.9811232797965 1699.2143215762871 2027.6237243541086 1764.5136636241164 1961.2295381027363 1858.0308233535939 1437.179614122766 1772.948407842429 1585.3688725386437 2332.051567658433 2374.157279834648 1.201681601936034 0.7157126176976075 0.8540393433813811 0.7432168368167289 0.8260739735993099 0.7826064596204846 0.6053430521767542 0.7467695686807696 0.6677606770218102 0.9822649861768437 1.0 11.213199796441153 -5.253457945321404 24.256908761542274 0.8031097958115633 1.2016819020214913 0.5082599475636682 0.11529986101086039 499.5507312266957 1518163.2230895422 0.018716096978647723 0.2789740563525402 5.578816217002021e-06 5.253457945321404 0.398572106209928 KGPQS(ph)LFNAPR ddPTM_A549_MK2206_60min_R1 1 KGPQSLFNAPR 11 1 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 KGPQS(1)LFNAPR 45.207 0.019968 3415000.0 1644.8 1959.0 1819.7 2044.2 2560.8 1840.9 2152.4 1794.8 3544.0 2895.1 2732.1 True False 1922.4020285008644 2058.704732434472 2077.7608226238312 2545.029091767626 2184.1097122712486 2035.7028161094788 2543.4632188831224 2049.2183963444772 2741.2896586050692 2241.0948992657272 2053.644167875967 0.9360930479446967 1.0024641876317546 1.0117433463523564 1.2392746180560998 1.0635287974596976 0.9912636511976441 1.2385121330506652 0.997844918023911 1.334841595971476 1.0912771230391076 1.0 11.00397051416994 -5.408734538506747 0.7582887180778287 1.144573135216395 0.8271912276637777 0.18891517147509507 0.11135709332803319 2.773780838789739 1.2748284200319988 0.022098867529921164 0.7110136840937005 3.901804106707474e-06 5.408734538506747 -0.3173819075526173 KGPQS(ph)LFNAPR ddPTM_A549_PD325901_60min_R1 1 KGPQSLFNAPR 11 1 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 KGPQS(1)LFNAPR 51.03 0.010613 6583900.0 4042.4 3787.0 4048.5 4461.6 5243.4 5189.5 4048.1 4707.5 5513.0 4217.8 3881.2 True False 4452.781472142405 4106.143780477656 4323.255555608207 4737.182898971221 4875.121672748 5147.238432573244 4202.152660705315 4613.6052195376915 5281.307781973926 3951.4873881857484 3403.8370049539108 1.3081653045260013 1.2063279688485715 1.2701123906098275 1.3917184906553317 1.4322429850938208 1.5121871068097572 1.2345340433720955 1.3554130861210734 1.5515748181500943 1.1608920704589534 1.0 11.732946238908406 -10.985571717105582 1.2560151579318775 0.9998120566631751 1.3780255863654955 0.46288599671312936 0.11251706888952379 0.26218351363550435 0.735301490274419 0.08462841382612658 0.01937890686072662 1.0337803738348512e-11 10.985571717105582 0.3782135297023205 KGPS(ph)STGASGQAK ddPTM_A549_MK2206_60min_R1 1 KGPSSTGASGQAK 13 1 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 KGPS(0.487)S(0.487)T(0.023)GAS(0.003)GQAK 43.382 0.05839400000000001 1182100.0 395.35 285.26 537.02 182.98 606.76 498.26 466.95 372.18 565.32 639.15 684.89 True False 462.07541462051154 299.7785155560271 613.177511109221 227.81010821428427 517.5064077701114 550.9855424817803 551.788770701298 424.93765475344736 437.2759226305357 494.76557109104635 514.8129109976104 0.897559880005916 0.5823057447706835 1.1910686348580468 0.44251047972520974 1.0052319914962535 1.0702636447366367 1.0718238779832372 0.8254215185279605 0.8493880267749645 0.9610589799161873 1.0 9.007904425148908 KGPS(ph)STGASGQAK ddPTM_A549_PD325901_60min_R1 1 KGPSSTGASGQAK 13 1 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 KGPS(0.494)S(0.494)T(0.01)GAS(0.002)GQAK 52.555 0.01915 1695200.0 556.3 354.07 352.17 511.94 382.87 536.77 304.88 419.6 257.75 411.03 511.65 True False 612.7751664735849 383.90872150877317 376.07037397024624 543.561371099903 355.9785320297952 532.3987230855261 316.48237523673765 411.23074883016767 246.91766384976967 385.07749565318113 448.7202936165792 1.3656060917921993 0.8555635369520729 0.8380953108655018 1.2113590110198207 0.7933194399582256 1.1864823825874211 0.7052998933611063 0.9164523082202173 0.5502707752744406 0.8581682200052683 1.0 8.809672621923472 -7.7744464921343575 24.987396565027918 0.7883314250094358 1.0204370439726598 0.25735194411067774 0.19652459296808827 276.032746453656 530273.3992473768 0.034044157099913853 0.047193040082573315 1.680945016158252e-08 7.7744464921343575 0.23210561896322401 KGPS(ph)TPYTK ddPTM_A549_PD325901_60min_R1 3 KGPSTPYTK 9 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 KGPS(0.743)T(0.257)PYTK;KGPS(0.304)T(0.203)PY(0.29)T(0.203)K;KGPS(0.463)T(0.279)PY(0.217)T(0.041)K 85.37700000000001 0.0010272999999999999 27604000.0 4571.2 4101.36 4486.6900000000005 5307.7 5559.3 5451.2 4568.2 5818.9 5323.9 4669.79 5469.299999999999 True False 5035.264858860419 4446.99600092417 4791.183764058739 5635.544574338698 5168.8339465438385 5406.807234539602 4742.045350814959 5702.837474661259 5100.154997360962 4374.938662448653 4796.610772749258 1.049754732543031 0.9271121238747708 0.9988685743022238 1.174901371267319 1.0776012879571704 1.1272140873420504 0.9886241714161386 1.1889306314075974 1.0632830636032038 0.9120895710996129 1.0 12.227799659576284 -6.021925511026175 24.947655798256225 1.058052585083116 0.9820726329603858 0.1367373337730462 0.08150441025435458 949.1596439564645 1079990.9628125879 0.009955123421030634 0.026612268127118064 9.507678527127996e-07 6.021925511026175 -0.07597995212273012 KGPSS(ph)TGASGQAK ddPTM_A549_MK2206_60min_R1 2 KGPSSTGASGQAK 13 1 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 KGPS(0.162)S(0.822)T(0.016)GASGQAK;KGPS(0.021)S(0.974)T(0.004)GASGQAK 117.0 6.6773000000000004e-06 72691000.0 4379.2 3673.5 3352.1000000000004 3357.5 4796.2 3307.9 3239.1000000000004 3630.8 5466.7 5415.8 6471.9 True False 5118.301898839362 3860.465459212881 3827.4781851499383 4180.087650723903 4090.6853334877223 3657.93978239369 3827.6025424104823 4145.477018858659 4228.501178526055 4192.367018563547 4864.748614646779 1.0521205316610165 0.7935590849627453 0.7867782054814039 0.8592607721061886 0.8408831899702879 0.7519278121340884 0.7868037684180311 0.8521461944359184 0.8692126795195314 0.8617849247011806 1.0 12.248149540485985 -10.079242487186821 0.709488975684681 0.9953964889158082 0.8339825045859932 0.06486141053888839 0.08442244050280419 0.4968334749292394 0.49228769175003373 0.040169964214225584 0.015530524558570175 8.332158308397205e-11 10.079242487186821 -0.16141398432981502 KGPSS(ph)TGASGQAK ddPTM_A549_PD325901_60min_R1 3 KGPSSTGASGQAK 13 1 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 KGPS(0.039)S(0.869)T(0.092)GASGQAK;KGPS(0.153)S(0.832)T(0.015)GASGQAK;KGPS(0.115)S(0.865)T(0.016)GAS(0.003)GQAK 159.69 6.6287e-19 112118600.0 8445.429999999998 8049.2699999999995 9126.61 7404.08 10207.630000000001 8628.43 8340.56 8376.28 9006.039999999999 9138.25 10062.71 True False 9302.803836403038 8727.610231815519 9745.996637364311 7861.413205714277 9490.681283211787 8558.162926826848 8657.964574929558 8209.208524335458 8627.547458147737 8561.259335456496 8825.060462774341 1.0541348555790526 0.9889575565663392 1.1043546589255269 0.8908055915169195 1.075423938821173 0.969756860355426 0.9810657514982902 0.9302155559118653 0.9776190763270406 0.9701077257849274 1.0 13.107390447357053 -6.240610343598712 24.998327331712662 0.9838465759771474 1.0431298612229858 0.29317748043256553 0.04992565450369278 883.0800760305829 1059842.6642243324 0.006187882427480961 0.016349887005795167 5.746318004197905e-07 6.240610343598712 0.05928328524583837 KGPST(ph)PYTK ddPTM_A549_MK2206_60min_R1 2 KGPSTPYTK 9 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 KGPS(0.092)T(0.907)PYTK;KGPS(0.099)T(0.585)PY(0.007)T(0.309)K 90.61399999999999 0.00065256 247760700.0 8724.92 9171.17 8651.74 7613.2 11192.2 8593.93 9421.4 8572.48 12610.2 12304.5 12173.4 True False 10197.473192186138 9637.943379765722 9878.686827239377 9478.434341769536 9545.842206217692 9503.33396841096 11133.146427423082 9787.65529211895 9754.00983435148 9524.904904153618 9150.408811251884 1.1144281531604054 1.0532800860125875 1.079589669818026 1.035848183101316 1.043214833689131 1.0385693321947647 1.2166829545072464 1.0696413126464328 1.0659643777180068 1.0409267061862013 1.0 13.159620484538612 -10.15334752892652 0.8530590224910317 1.0045325636320186 1.0788206267125358 0.16228866792486718 0.04973603698314888 0.5811121267809914 0.8352473017240762 0.023018902714152027 0.009661673260866815 7.025099359637064e-11 10.15334752892652 0.07428806308051716 KGPST(ph)PYTK ddPTM_A549_PD325901_60min_R1 4 KGPSTPYTK 9 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 KGPS(0.134)T(0.862)PY(0.001)T(0.004)K;KGPS(0.1)T(0.81)PY(0.012)T(0.078)K;KGPS(0.102)T(0.898)PYTK;KGPS(0.112)T(0.883)PYT(0.006)K 106.26 0.00033 1002650000.0 40648.0 40708.8 42043.5 41361.3 46559.2 42887.700000000004 45175.3 45254.0 48056.0 46697.7 51024.0 True False 44774.555036523976 44139.473443546034 44896.82473810394 43916.093562672184 43289.042412520255 42538.43679057161 46894.470762372686 44351.373468923804 46036.37343924163 43749.199252520666 44748.37146778533 1.0005851289751964 0.9863928450518553 1.0033175122456799 0.9814009342057888 0.9673881080495711 0.9506141876290478 1.0479592714593502 0.9911282134781748 1.028783214432363 0.9776713166872683 1.0 15.449547558728536 -7.759083503525761 24.999979240077817 1.0142383744751586 0.9821634380785839 0.26160609217358055 0.022241657932498285 51.42848115444739 545741.5691086979 0.003104546370625011 0.004486502118330455 1.7414720014573818e-08 7.759083503525761 -0.03207493639657477 KGPT(ph)RPPRPSTPDLSK ddPTM_A549_PD325901_60min_R1 1 KGPTRPPRPSTPDLSK 16 3 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 KGPT(0.433)RPPRPS(0.283)T(0.283)PDLSK 51.818999999999996 0.0044428 18253000.0 2638.0 2414.0 2387.0 2687.8 2635.8 2602.5 2881.4 3057.8 2714.4 2896.0 3422.0 True False 2905.8078180070397 2617.4362519337383 2548.996174197059 2853.8193015633037 2450.670501016361 2581.3061028561265 2991.0532537625822 2996.8097802023044 2600.3232075802684 2713.1460657655484 3001.115693845275 0.9682425185961028 0.8721543982131741 0.8493495200550155 0.9509194555264735 0.8165864801687673 0.860115492431665 0.9966471002423102 0.9985652290407193 0.8664521707420488 0.904045809140148 1.0 11.551283220965688 -7.744261136341774 24.999288107176408 0.9450077617150606 0.8836869728872019 0.2558179598899484 0.05596105958676468 335.60612560764196 488402.49686209625 0.009889668609123627 0.014648782006133997 1.8019339326336387e-08 7.744261136341774 -0.06132078882785874 KGPTRPPRPS(ph)TPDLSK ddPTM_A549_PD325901_60min_R1 1 KGPTRPPRPSTPDLSK 16 3 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 KGPT(0.022)RPPRPS(0.489)T(0.489)PDLSK 65.25 0.00049909 16591000.0 3946.3 3361.9 3894.8 3077.5 5317.8 5048.7 4072.4 4544.2 4734.8 4766.5 5140.5 True False 4346.925470887484 3645.2191115890755 4159.124549335025 3267.59018549039 4944.296073414069 5007.585061091148 4227.377410502787 4453.56236614406 4535.81282171053 4465.542376544018 4508.251088314329 0.9642154764083547 0.8085661246858484 0.9225583198140269 0.7248021730555758 1.0967215393636784 1.1107600182410258 0.9376978628054715 0.9878691933747823 1.0061136198619556 0.9905265454532881 1.0 12.138352153716605 -6.772024812023739 24.999999210819812 1.010490728753493 0.8565393221270722 0.5320458936263514 0.07350747938480333 121.72674367387282 287486.8241625232 0.009879884058078303 0.01880935660198814 1.6903443564756097e-07 6.772024812023739 -0.15395140662642082 KGQGGAGAGDDEEED ddPTM_A549_PD325901_60min_R1 2 KGQGGAGAGDDEEED 15 1 P46781 P46781 RPS9 40S ribosomal protein S9 0 ; 144.65 1.3137000000000001e-11 18798700.0 3819.3999999999996 3262.0 3633.8999999999996 4303.6 5022.4 3963.0 4427.8 4871.9 5003.700000000001 5012.7 5030.0 False True 4207.142676306327 3536.900187989994 3880.5183064158746 4569.423597815256 4669.643950339388 3930.7266419284642 4596.302351985129 4774.726132568386 4793.411889835468 4696.197266527268 4411.341887797119 0.9537104090581466 0.8017742169959552 0.8796684557935452 1.0358352886806235 1.0585540792602808 0.8910501026460549 1.0419283902477967 1.082374990198896 1.0866108344708558 1.0645734078145543 1.0 12.107001861169165 -6.251217261830752 6.271740714518092 1.0351425644143353 0.8697579110625889 0.5633428298010155 0.06034395149122603 0.08422156754470773 15.645199600079577 0.00869505346802394 0.022220661585804834 5.607673742037216e-07 6.251217261830752 -0.16538465335174635 KGQGTAATGNQAT(ph)PK ddPTM_A549_MK2206_60min_R1 2 KGQGTAATGNQATPK 15 1 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 KGQGTAATGNQAT(1)PK;KGQGTAATGNQAT(1)PK 71.558 0.00089775 8548400.0 893.59 686.95 758.81 492.49 811.01 839.27 521.47 674.62 907.3399999999999 1005.47 1393.62 True False 1044.4061458220378 721.9128207993158 866.4206681404565 613.1500721087159 691.7115033384506 928.0809943376619 616.2143489829871 770.2494509371024 701.8289387242447 778.3336286707574 1047.545692044693 0.9970029505667414 0.689146856582668 0.8270958247647409 0.5853205991539281 0.6603163075286067 0.8859575304311077 0.5882457955415816 0.7352895981402596 0.6699745357687955 0.7430068536213791 1.0 10.032797457702339 -10.799545886676379 0.9859449189327331 1.0040649816041929 0.7287924330486597 0.0058278439612113875 0.14038860661623323 0.42356302242937105 0.7133219644240332 0.08348083225721403 0.019661345533683646 1.5865512782969786e-11 10.799545886676379 -0.2752725485555332 KGQGTAATGNQAT(ph)PK ddPTM_A549_PD325901_60min_R1 1 KGQGTAATGNQATPK 15 1 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 KGQGTAATGNQAT(1)PK 103.9 3.6383999999999998e-06 8741300.0 1948.4 2144.3 2083.5 2176.4 2185.4 2205.1 2148.2 2888.2 2298.7 2089.1 2541.9 True False 2146.200133663729 2325.007686421504 2224.8988391032963 2310.831285036973 2031.9050432207118 2187.142396698574 2229.9509265401443 2830.5925852509313 2202.0936329445794 1957.1938694719631 2229.2624144317074 0.9627400165048973 1.0429493052814083 0.9980425923389896 1.0365900712617808 0.9114696547461836 0.9811058503205102 1.000308851979013 1.2697440045309862 0.9878126588815906 0.8779558013455759 1.0 11.122350736035962 -8.012321193862823 24.97714578108319 1.0204741047762027 0.9903816028015984 0.041726912858867204 0.09340399925061983 2262.1425867290523 4585746.936216468 0.013748690075240806 0.018280473889729528 9.720280690488009e-09 8.012321193862823 -0.030092501974604335 KGQSEEIQK ddPTM_A549_MK2206_60min_R1 2 KGQSEEIQK 9 1 C9JXB8;C9JNW5;P83731 C9JXB8 RPL24 60S ribosomal protein L24 0 ; 58.978 0.010366 4031300.0 3454.4 3816.8 3067.8 2863.8 3155.6000000000004 2669.8 2478.2 2789.3 3759.0 5225.2 5114.2 False True 4037.418268028567 4011.0588171290906 3502.860170162876 3565.431128560867 2691.415420198044 2952.3164639301885 2928.456861659612 3184.691816872994 2907.5925018895186 4044.8236909409948 3844.202995260518 1.0502614646017034 1.0434045293847092 0.9112058271848598 0.9274825322587422 0.700123126566486 0.7679918223803665 0.7617851776480272 0.8284400747825676 0.7563576911714242 1.0521878516633538 1.0 11.908468805093005 -5.909884627576133 1.8608925540989942 0.8500781698708002 1.0596095177438498 0.3550978086422598 0.10229762822126266 0.349708632726395 2.259610120888541 0.016084608397074256 0.08166022965826272 1.230595641060757e-06 5.909884627576133 0.2095313478730496 KGQSEEIQK ddPTM_A549_PD325901_60min_R1 2 KGQSEEIQK 9 1 C9JXB8;C9JNW5;P83731 C9JXB8 RPL24 60S ribosomal protein L24 0 ; 83.0 0.0014832 11548100.0 5149.9 4828.6 4932.1 5064.1 6080.700000000001 5481.799999999999 5332.1 5952.2 6696.6 6093.200000000001 6179.9 False True 5672.714056843992 5235.523067973176 5266.821965126649 5376.897955594437 5653.612609276187 5437.158038284994 5535.015983337077 5833.478701589428 6415.165190053802 5708.474312127982 5419.8114776137945 1.0466626155309637 0.9659972656979287 0.9717721708367423 0.992082100605047 1.0431382406248066 1.003200583773596 1.0212561832084248 1.0763250208396107 1.1836509842733933 1.053260678107807 1.0 12.404026954499187 -8.215251609169819 3.537503310550399 1.0886443027926571 1.0027972735815103 0.3507879601802484 0.0469175374759644 0.2607922780816261 6.738472534781805 0.01126025171989786 0.014487045979542408 6.09183863385236e-09 8.215251609169819 -0.08584702921114684 KGRS(ph)PDELPSAGGDGGK ddPTM_A549_MK2206_60min_R1 2 KGRSPDELPSAGGDGGK 17 2 A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;A0A2R8Y5N1;B4E2I7 A0A140T8Z0 DIAPH1 Protein diaphanous homolog 1 1 KGRS(1)PDELPSAGGDGGK;KGRS(1)PDELPSAGGDGGK 84.166 3.8306e-05 10501500.0 3443.3999999999996 3562.5 3725.4 2969.3999999999996 4574.5 3393.2 3305.8 3570.3999999999996 5361.8 5254.9 5199.5 True False 4024.5617369527467 3743.816033332211 4253.7177384199695 3696.9031333014327 3901.597109803505 3752.266171776133 3906.4210690316977 4076.5151338914193 4147.360861035178 4067.814440313448 3908.3206511002854 1.0297419521655002 0.9579091296611596 1.088374808045099 0.9459057900637365 0.9982796853439118 0.9600712190080363 0.9995139646313173 1.0430349753272632 1.061161872649215 1.0408087778489366 1.0 11.932333120129863 -8.19198835897782 6.971589892799133 1.0307307614391354 0.9956286771832606 0.1808220986615353 0.03938767124036344 0.39530671717378174 34.137467335708386 0.006439072121266734 0.008319847381978109 6.4270494443491755e-09 8.19198835897782 -0.0351020842558748 KGRS(ph)PDELPSAGGDGGK ddPTM_A549_PD325901_60min_R1 3 KGRSPDELPSAGGDGGK 17 2 A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;A0A2R8Y5N1;B4E2I7 A0A140T8Z0 DIAPH1 Protein diaphanous homolog 1 1 KGRS(0.999)PDELPS(0.001)AGGDGGK;KGRS(0.998)PDELPS(0.002)AGGDGGK;KGRS(0.997)PDELPS(0.003)AGGDGGK 75.3 9.9332e-05 35077200.0 11359.3 11527.7 12411.8 13094.900000000001 16083.300000000001 14113.7 12848.7 13735.300000000001 14464.599999999999 14413.699999999999 15960.8 True False 12512.487773725315 12499.179735466674 13254.139386216608 13903.742232324337 14953.664492372875 13998.762706582327 13337.664309578424 13461.3386663656 13856.703164001456 13503.616522142573 13997.722783847363 0.8938945260556288 0.8929437972503693 0.946878259477405 0.993286011376688 1.0682926589765458 1.0000742922796102 0.9528452960198204 0.961680615785539 0.989925531315091 0.9647009539098058 1.0 13.772904521314521 -5.979105853203011 2.6552791008823258 0.9950740185648393 0.8923251312962345 0.6280566501941687 0.029108390810267996 0.12545110237608942 1.7582710682168021 0.004097408491375618 0.015167382644903192 1.0492866485439492e-06 5.979105853203011 -0.10274888726860487 KGS(ph)DALRPPVPQGEDEVPK ddPTM_A549_MK2206_60min_R1 4 KGSDALRPPVPQGEDEVPK 19 2 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK 170.97 8.8447e-35 83552800.0 5260.129999999999 6228.199999999999 6004.3099999999995 6801.23 10362.9 8586.82 8189.639999999999 8745.380000000001 12865.8 13159.599999999999 13040.2 True False 6147.911346168686 6545.1887772069285 6855.811444132822 8467.53165531882 8838.531137650625 9495.47159293019 9677.591579582782 9985.064396602997 9951.716842460806 10186.837220260868 9801.95844878891 0.6272125492358414 0.6677429629397812 0.6994328204870015 0.863861206875962 0.9017107329956778 0.9687320796695901 0.9873120387261493 1.01868054723663 1.015278415477307 1.0392654971435338 1.0 13.258854315734053 -6.405654489220354 0.8931514390324815 1.008042609032092 0.6056272929614592 0.985142198406803 0.01792554004206058 0.048177447130115146 0.06387954042537311 0.00241451731644676 0.012797347526443953 3.92957435425077e-07 6.405654489220354 -0.40241531607063274 KGS(ph)DALRPPVPQGEDEVPK ddPTM_A549_PD325901_60min_R1 6 KGSDALRPPVPQGEDEVPK 19 2 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK 143.9 2.5961e-21 166577600.0 11459.5 11620.1 11641.3 12249.8 14853.499999999998 12540.099999999999 13426.1 13142.8 13020.6 13605.6 14782.4 True False 12622.86000396198 12599.366607744492 12431.348622823714 13006.442324685679 13810.241401793191 12437.977583256894 13937.037582543824 12880.656543672862 12473.38946235619 12746.540094053778 12964.258513354294 0.9736661754283406 0.9718540088325196 0.95889391668782 1.0032538545330558 1.065255015361462 0.9594052425323604 1.0750354575379288 0.9935513496899714 0.9621367430699976 0.9832062574904498 1.0 13.662252073615878 -6.26280486930568 24.97380918247083 0.9946644857893321 0.9685096308339279 0.13000569639716042 0.0358136545033079 250.13480545920288 4574813.107746788 0.005247775726495653 0.01285390684814471 5.460031279379776e-07 6.26280486930568 -0.02615485495540415 KGS(ph)DDAPYSPTAR ddPTM_A549_PD325901_60min_R1 2 KGSDDAPYSPTAR 13 1 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 KGS(1)DDAPYSPTAR;KGS(1)DDAPYSPTAR 95.814 7.0409e-05 41022000.0 5428.1 6024.3 5928.1 6537.5 6205.1 6792.6 6318.0 6751.0 7668.200000000001 7825.6 8170.2 True False 5979.156716043981 6531.988903282688 6330.4165145612005 6941.306527260251 5769.275182432891 6737.283317679349 6558.434947342257 6616.34600894295 7345.932220883816 7331.490280474752 7165.317195165014 0.8344580641982708 0.9116119671143545 0.8834802901444218 0.9687368106947282 0.8051667533051936 0.9402630943157001 0.9153028077762885 0.9233849428755929 1.0252068430188515 1.023191309021444 1.0 12.806814855969119 -8.648665115404384 3.7297940542848083 1.0119863029297973 0.8967650796437217 0.6000249273541083 0.04336950031748379 0.10859800949412779 2.8868647295941567 0.006971635581778741 0.007876570893076302 2.24561284903011e-09 8.648665115404384 -0.11522122328607565 KGS(ph)DSSIPDEEK ddPTM_A549_MK2206_60min_R1 1 KGSDSSIPDEEK 12 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 KGS(0.666)DS(0.222)S(0.112)IPDEEK 81.594 3.7734e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KGS(ph)ELTCPEDNK ddPTM_A549_MK2206_60min_R1 1 KGSELTCPEDNK 12 1 A0A075B6G6;Q7Z7B0-2;Q7Z7B0;Q7Z7B0-3 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 KGS(0.994)ELT(0.006)CPEDNK 88.76799999999999 0.00011581 5955900.0 2776.8 3343.4 2612.1 3139.7 3454.5 2627.1 2712.7 2941.7 4115.1 4117.1 3531.7 True False 3245.455953758026 3513.5647791839788 2982.535057853334 3908.92664094649 2946.3476261484775 2905.0979782721543 3205.5624762424463 3358.694983578419 3183.0364204643693 3187.044250549866 2654.6814200386334 1.2225406518688013 1.3235353789204756 1.123500181731761 1.4724654383913245 1.1098686282686228 1.0943301732340736 1.2075130567628698 1.2651970056465534 1.199027648454347 1.200537370131398 1.0 11.374323022788433 -14.999999948648744 0.17964582668252518 0.026635848833723337 1.2742112411739221 0.030931453323547187 0.11851136558062515 35.331266186380695 0.39199038789406193 12.014211415443738 0.11166860238842326 1.0000001182406428e-15 14.999999948648744 1.2475753923401989 KGS(ph)FSALVGR ddPTM_A549_PD325901_60min_R1 3 KGSFSALVGR 10 1 A0A087WWN2;Q13619 A0A087WWN2 CUL4A Cullin-4A 1 KGS(0.997)FS(0.003)ALVGR;KGS(0.997)FS(0.003)ALVGR;KGS(0.993)FS(0.007)ALVGR 99.161 0.00020049 69649400.0 9851.9 9346.5 10695.0 10262.5 13287.400000000001 11655.2 11036.400000000001 11166.099999999999 13637.0 10866.3 10866.0 True False 10852.057635414545 10134.162356544597 11420.827014259548 10896.391317171443 12354.138863041495 11560.283915469248 11456.396241349814 10943.383375864003 13063.884313944942 10180.199963545636 9529.550885249198 1.1387795464959902 1.0634459565383378 1.1984643507112027 1.1434317785151846 1.2964030531768793 1.2130985032425214 1.2021968694330791 1.1483629719427049 1.3708814267592129 1.068276992917219 1.0 13.218192508147599 -5.7728303304754585 24.756898229132595 1.1880871954973293 1.101112752136062 0.09316393751176921 0.09639849638332407 391.18309592013105 850198.1782952311 0.018091289509136844 0.056976365098040375 1.687212054150943e-06 5.7728303304754585 -0.08697444336126736 KGS(ph)GDYMPMSPK ddPTM_A549_PD325901_60min_R1 1 KGSGDYMPMSPK 12 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 KGS(1)GDYMPMSPK 60.474 0.0014402000000000002 3694500.0 1573.8 1979.8 2077.2 1571.1 1978.5 1984.0 2094.9 2478.6 2193.7 2686.5 2910.5 True False 1733.5710174296735 2146.644694108704 2218.1712832183202 1668.1432787730155 1839.5369854544617 1967.842961793103 2174.622565873265 2429.1623785759148 2101.5064177972436 2516.873931519043 2552.5269511796237 0.6791587515377738 0.8409880620914323 0.8690099362881225 0.6535262156593883 0.7206728942095357 0.7709391514489925 0.8519489147287107 0.9516696297577986 0.8233043011851665 0.9860322651464642 1.0 11.317710478724191 -7.9064278056574455 2.808106740048307 0.9168399645910552 0.7574952182166166 0.5723266298712036 0.07365307838020353 0.19461699660815515 3.118029774716829 0.013775982486755366 0.0195243245813836 1.2404298091148167e-08 7.9064278056574455 -0.15934474637443863 KGS(ph)GS(ph)EQEGEDEEGGER ddPTM_A549_MK2206_60min_R1 2 KGSGSEQEGEDEEGGER 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER 110.32 9.596799999999999e-09 14823000.0 2963.1 2807.3 2400.1 2033.1 2724.2 1457.6 706.8 1173.1 1707.3 3971.2 3507.0 True False 3463.198839160332 2950.179579052217 2740.470270033224 2531.2095912693276 2323.473788725917 1611.8422645234261 835.2164110326104 1339.390517468077 1320.5992759978649 3074.1031618818192 2636.115111723952 1.3137509905231295 1.1191391324041517 1.0395867228427011 0.9602044994211126 0.8814007318543934 0.6114460849432795 0.31683609236866755 0.5080925758936793 0.5009641916335841 1.1661490608698928 1.0 11.364197654813557 -6.435170558059743 1.2293940539753299 0.6950955048080276 1.2133600019633903 0.44439732468286064 0.22902920583839062 0.3860393068485587 1.0838173002075395 0.03783822607198441 0.1456648157717992 3.671380880798743e-07 6.435170558059743 0.5182644971553627 KGS(ph)GS(ph)EQEGEDEEGGER ddPTM_A549_PD325901_60min_R1 4 KGSGSEQEGEDEEGGER 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER 152.32 7.9432e-17 190359000.0 18096.600000000002 17770.8 17650.3 19285.7 22637.0 18882.2 19337.5 21410.2 19518.1 21757.6 22084.199999999997 True False 19933.75350998719 19268.40768262802 18848.155497876134 20476.933887997406 21047.05521341047 18728.429623573462 20073.39914438603 20983.156765023017 18697.82213302108 20383.821422824763 19367.983403278136 1.0292116166628527 0.9948587460771336 0.973160452764844 1.0572568894566263 1.0866931665094333 0.9669788141393995 1.0364217444025947 1.0833939872889145 0.965398500385764 1.052449343764653 1.0 14.241386127731971 -8.811713148515569 24.999997845351835 0.983660397023819 1.0266436295492 0.0 0.04330544451312406 124.81928566950559 62069.14924596462 0.006778408595422066 0.007216171244494319 1.5427190823899765e-09 8.811713148515569 0.042983232525381054 KGS(ph)GSEQEGEDEEGGER ddPTM_A549_MK2206_60min_R1 2 KGSGSEQEGEDEEGGER 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGS(0.771)GS(0.229)EQEGEDEEGGER;KGS(0.913)GS(0.087)EQEGEDEEGGER 62.303000000000004 0.0013345 15221400.0 2156.2200000000003 2625.1 2243.5 2251.1 2600.3999999999996 1893.46 1668.8600000000001 1320.67 2620.3 3496.6000000000004 3494.6 True False 2520.137221482329 2758.706377291336 2561.6620352566715 2802.61960105572 2217.8846047290485 2093.8246804229752 1972.0702599262636 1507.8790168822486 2026.8062337592737 2706.7156315058346 2626.794373946544 0.9593964592272324 1.050217864273329 0.9752046298957096 1.0669352838779738 0.8443312604621038 0.7971026210464942 0.7507516688348121 0.5740377061249692 0.7715892244409535 1.0304253954371065 1.0 11.359087555061903 -6.773450731229582 23.99752750561309 0.8444070484902658 1.0129060763269704 0.35926312885295375 0.11939966279167827 145.55559418624267 290806.82768000325 0.01989104742598586 0.03781803994304591 1.6848035493750856e-07 6.773450731229582 0.16849902783670456 KGS(ph)GSEQEGEDEEGGER ddPTM_A549_PD325901_60min_R1 1 KGSGSEQEGEDEEGGER 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGS(0.823)GS(0.177)EQEGEDEEGGER 73.546 0.00023260000000000002 13475000.0 1601.3 1925.0 2232.5 2052.7 1926.6 2197.2 2010.8 2300.7 1561.9 2410.2 2739.5 True False 1763.8627971852438 2087.226505788087 2384.010875113084 2179.4906169800565 1791.28226240918 2179.3067316793386 2087.322094351981 2254.8107336357652 1496.2587746535605 2258.0195606726934 2402.558867121313 0.73416007462854 0.8687514526080895 0.9922799011245651 0.9071538878010795 0.7455726837425841 0.9070773505294087 0.8687912387566007 0.9385038445852625 0.6227771544454771 0.9398394318546696 1.0 11.230356064782255 KGS(ph)ITEYTAAEEK ddPTM_A549_MK2206_60min_R1 6 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.905)IT(0.095)EYTAAEEK;KGS(0.659)IT(0.341)EYTAAEEK;KGS(0.914)IT(0.086)EYTAAEEK;KGS(0.997)IT(0.003)EYTAAEEK;KGS(0.59)IT(0.41)EYTAAEEK;KGS(0.849)IT(0.15)EYT(0.002)AAEEK 186.45 1.1921e-25 419103000.0 51277.3 53289.0 45985.2 47548.299999999996 67482.0 54343.2 49783.3 55436.0 72275.9 67227.3 63987.2 True False 59931.654630379024 56001.18248427798 52506.59283427013 59197.63563452426 57555.48719286487 60093.76135390333 58828.281204527106 63294.222765629806 55905.52405089558 52040.60623861243 48097.41228312032 1.2460473814598942 1.164328387453216 1.0916718871525901 1.230786290249123 1.1966441532045549 1.2494177649343745 1.2231069908343648 1.3159590040531717 1.1623395396370524 1.0819834949182072 1.0 15.553671656356906 -10.039627945712896 0.8551934118830041 1.0137249408047786 1.2086710437085388 0.5359543213284377 0.05907249033072768 0.25708258395024236 0.37844390056820454 0.025662293811077454 0.01187830996953425 9.127924816348982e-11 10.039627945712896 0.19494610290376024 KGS(ph)ITEYTAAEEK ddPTM_A549_PD325901_60min_R1 2 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.738)IT(0.262)EYTAAEEK;KGS(0.65)IT(0.35)EYTAAEEK 175.26 5.0154e-22 239209000.0 16225.6 16118.7 16944.699999999997 16049.3 19143.699999999997 16737.4 15404.0 18504.9 20767.4 22992.0 23468.0 True False 17872.810967344594 17477.07941758256 18094.66923875864 17040.628810395112 17799.112554179716 16601.09616366729 15990.207649392225 18135.805252686776 19894.61839857886 21540.281196160726 20581.58477590909 0.8683884726051253 0.8491610149496176 0.8791679278234491 0.8279551354248146 0.8648076787077018 0.8065995084644311 0.7769181928161767 0.8811666084098092 0.9666222798287948 1.0465803013076913 1.0 14.32906645314764 -8.717721021081605 2.9731293951134856 0.9858128660447696 0.8395949780655211 0.819859767067631 0.033614887224119865 0.07119111965684334 1.2598645526722325 0.005359253436644881 0.00591249150230148 1.915485985802185e-09 8.717721021081605 -0.1462178879792485 KGS(ph)ITEYTAAEEKEDGR ddPTM_A549_MK2206_60min_R1 4 KGSITEYTAAEEKEDGR 17 2 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.997)IT(0.003)EYTAAEEKEDGR;KGS(0.806)IT(0.192)EY(0.001)T(0.001)AAEEKEDGR;KGS(0.887)IT(0.113)EYTAAEEKEDGR;KGS(0.988)IT(0.012)EYT(0.001)AAEEKEDGR 150.64 1.9861999999999998e-17 128203000.0 15275.199999999999 20011.6 16275.699999999999 18307.8 22765.6 17487.0 16323.5 17915.7 27203.1 23158.6 22762.300000000003 True False 17853.280317215707 21030.104963545517 18583.83899586674 22793.211821868375 19416.810397407953 19337.462733068856 19289.26865519358 20455.305339530172 21041.641284424248 17927.056175653786 17109.79270247909 1.0434539230056767 1.2291268123019632 1.0861522006151523 1.3321734645309755 1.1348360985457522 1.1301985400598682 1.1273817860106918 1.1955320380103927 1.229801064823857 1.0477658313800773 1.0 14.062534660188167 -10.88761520532778 1.1026277032074467 0.9986551065323538 1.1739120316810392 0.3396545677443912 0.07615437239981075 0.37854589471018213 0.8069942380407996 0.05149954355451058 0.011977531637994194 1.2953430361991255e-11 10.88761520532778 0.1752569251486854 KGS(ph)ITEYTAAEEKEDGR ddPTM_A549_PD325901_60min_R1 4 KGSITEYTAAEEKEDGR 17 2 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.949)IT(0.051)EYTAAEEKEDGR;KGS(0.996)IT(0.004)EYTAAEEKEDGR;KGS(0.894)IT(0.106)EYTAAEEKEDGR;KGS(0.941)IT(0.058)EYT(0.001)AAEEKEDGR 170.27 1.7319999999999996e-30 114738000.0 17203.4 19616.199999999997 20047.7 21358.1 22024.9 18480.3 19065.0 19973.3 28253.5 25919.399999999998 29588.6 True False 18949.87650352629 21269.326017059873 21408.257478613494 22677.341329235518 20477.94700578011 18329.802563923928 19790.529007768317 19574.916862749276 27066.103649192864 24282.844660567516 25949.389777589233 0.7302628950408708 0.8196464810678816 0.825000420514797 0.8739065358993695 0.7891494629082013 0.706367383627424 0.7626587437081116 0.7543497951406485 1.0430343018149915 0.9357770979855179 1.0 14.66341299230613 -8.762666622713567 24.999963729008233 1.020321766146748 0.785358461432449 0.7618637749214547 0.05172556457705071 8.945947623888626 182235.9612311917 0.008435967746383558 0.00922716662132484 1.7271632047988367e-09 8.762666622713567 -0.23496330471429905 KGS(ph)ITEYTAAEEKEDGRR ddPTM_A549_MK2206_60min_R1 8 KGSITEYTAAEEKEDGRR 18 3 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.807)IT(0.193)EYTAAEEKEDGRR;KGS(0.985)IT(0.015)EYTAAEEKEDGRR;KGS(0.973)IT(0.027)EYTAAEEKEDGRR;KGS(0.992)IT(0.008)EYTAAEEKEDGRR;KGS(0.748)IT(0.252)EYTAAEEKEDGRR;KGS(0.519)IT(0.481)EYTAAEEKEDGRR;KGS(0.855)IT(0.145)EYTAAEEKEDGRR;KGS(0.887)IT(0.113)EYTAAEEKEDGRR 279.96 1.9981999999999992e-116 1318947000.0 53726.6 56723.4 54828.5 44724.899999999994 73407.59999999999 49104.49999999999 47866.80000000001 43246.5 74618.0 72991.59999999999 75733.9 True False 62794.33659074327 59610.3787747695 62604.00574997569 55682.50250777707 62609.43928245975 54300.70559707094 56563.577962104966 49376.82381185169 57717.14214046078 56502.74686513221 56927.08248069316 1.1030661304668123 1.0471356721115364 1.0997227158305163 0.9781372956652364 1.099818163063139 0.9538641931191018 0.9936145591386757 0.8673696536020067 1.013878449857949 0.9925459799260771 1.0 15.796827542891858 -6.26184986018122 24.999428429627333 0.9971944684785786 1.0796909250115694 0.3760808905413018 0.05389802115360687 32.51114514720778 1980072.2036201113 0.007351434164887097 0.018121833051045182 5.472051043152252e-07 6.26184986018122 0.08249645653299076 KGS(ph)ITEYTAAEEKEDGRR ddPTM_A549_PD325901_60min_R1 3 KGSITEYTAAEEKEDGRR 18 3 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.962)IT(0.038)EYTAAEEKEDGRR;KGS(0.994)IT(0.006)EYTAAEEKEDGRR;KGS(0.917)IT(0.083)EYTAAEEKEDGRR 263.32 9.856899999999998e-101 1185070000.0 18879.4 19415.5 18058.2 20151.0 19839.399999999998 22810.9 21069.7 23485.8 27199.5 30577.5 32450.3 True False 20796.022789720308 21051.712323703166 19283.738044778103 21395.681503758533 18445.948986214415 22625.135593329793 21871.518963282244 23017.35729474633 26056.399603809135 28646.831431611212 28459.11881940014 0.7307331938733107 0.7397176440105566 0.6775943474269722 0.7518040751554622 0.6481560129556821 0.7950047834195972 0.7685241100428158 0.8087867175653995 0.9155729581495999 1.0065958687407817 1.0 14.796603371893022 -8.660526847660158 0.7367978774704788 0.9828259673478225 0.7110981292887225 0.8998057073539982 0.03643741475315761 0.11108815928888822 0.12476885330148162 0.008947971955843199 0.009662189308285806 2.1851092341619388e-09 8.660526847660158 -0.27172783805909995 KGS(ph)KVGDFGDAINWPTPGEIAHK ddPTM_A549_MK2206_60min_R1 2 KGSKVGDFGDAINWPTPGEIAHK 23 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;H0YAX9 Q6PKG0 LARP1 La-related protein 1 1 KGS(1)KVGDFGDAINWPTPGEIAHK;KGS(1)KVGDFGDAINWPTPGEIAHK 106.04 7.4979e-11 8835900.0 1936.4299999999998 1949.46 1554.51 1387.45 2333.37 1810.1799999999998 1993.51 2001.2200000000003 2919.4300000000003 2840.1 2651.05 True False 2263.252042831913 2048.679187183107 1774.9628929916869 1727.3753122849978 1990.134363996549 2001.7320460997632 2355.7049625885966 2284.8990634792135 2258.1837663717265 2198.519437464886 1992.7211197421702 1.135759550300117 1.0280812336892264 0.8907231801815508 0.8668424774403433 0.9987018977618123 1.0045219204374964 1.1821548631418084 1.1466225960283127 1.1332161555370595 1.1032750221211802 1.0 10.96052410456448 -7.5411463861155745 24.637746716514425 1.0808157188205347 0.9774597682016611 0.34462279997781864 0.08102388890858522 239.38503849257313 322859.84595932445 0.014294567678261866 0.021204411671047165 2.8764287035964967e-08 7.5411463861155745 -0.1033559506188736 KGS(ph)KVGDFGDAINWPTPGEIAHK ddPTM_A549_PD325901_60min_R1 2 KGSKVGDFGDAINWPTPGEIAHK 23 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;H0YAX9 Q6PKG0 LARP1 La-related protein 1 1 KGS(1)KVGDFGDAINWPTPGEIAHK;KGS(1)KVGDFGDAINWPTPGEIAHK 103.73 9.772399999999998e-11 12656800.0 1722.83 1466.32 1527.71 1371.45 1774.13 1739.92 1969.75 1595.3899999999999 2375.6 2243.28 2386.6000000000004 True False 1897.7304333195877 1589.8919324504873 1631.3895874665222 1456.1613517110636 1649.5212292162353 1725.7506683886381 2044.7099141385584 1563.5686948907567 2275.761793371533 2101.6389179594416 2093.063329903896 0.9066760695705863 0.7596004906948935 0.7794267684874248 0.6957082143223655 0.7880894981290288 0.8245095328615197 0.9768982547854594 0.7470240735441812 1.0872875946262102 1.0040971469582525 1.0 11.031400248599736 -8.449974524014664 1.1786689141458393 1.0406459000933714 0.7903537907746606 0.49783779738011635 0.08797530863300314 0.2176899780253043 0.5868263909340541 0.01737197985965661 0.021024361031803725 3.5483420341889497e-09 8.449974524014664 -0.2502921093187108 KGS(ph)LDVK ddPTM_A549_MK2206_60min_R1 1 KGSLDVK 7 1 O60658-6;O60658-2;O60658 O60658-6 PDE8A High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A 1 KGS(1)LDVK 55.806000000000004 0.01637 12229000.0 3204.6 4140.4 3671.4 3440.0 5544.1 4555.4 4889.6 4576.8 6714.6 6866.8 6787.5 True False 3745.458135052209 4351.128674921736 4192.059726428055 4282.800154427467 4728.570234224861 5037.449404370208 5777.977027992432 5225.575415862156 5193.753821012866 5315.585110800278 5101.976424529896 0.7341190596342909 0.8528319836998572 0.8216540763052071 0.8394394246582766 0.9268114630029007 0.9873525444277933 1.1324977905057303 1.0242257080487487 1.0179885967410025 1.0418678309141862 1.0 12.316840517139832 -6.930995308434911 1.8240710657012251 1.0194153560565553 0.8082876924297026 0.8433903785619518 0.04473962912325234 0.10524449481256669 0.7039948092345678 0.006832920771572463 0.01486795484077826 1.1722080285240339e-07 6.930995308434911 -0.21112766362685276 KGS(ph)LDVK ddPTM_A549_PD325901_60min_R1 2 KGSLDVK 7 1 O60658-6;O60658-2;O60658 O60658-6 PDE8A High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A 1 KGS(1)LDVK;KGS(1)LDVK 70.942 0.008736 63136000.0 15107.0 14991.5 15436.9 14010.400000000001 16828.8 15879.9 16817.8 17263.9 17640.1 16151.6 18569.1 True False 16640.651518814397 16254.886317673827 16484.540863620685 14875.790588072972 15646.803144208247 15750.579359364072 17457.810582053273 16919.55797123245 16898.747942100163 15131.785219550704 16285.218419223338 1.0218255039902626 0.9981374458254912 1.0122394701296769 0.9134535506452494 0.9607978684362319 0.9671702862008796 1.0720034655135966 1.038951860250172 1.0376740125359696 0.9291729978695832 1.0 13.991275449004922 -7.721728003734033 24.999512485475623 1.0238625487442463 0.9775227358421407 0.13954609868581003 0.04301822321433672 153.8819651717871 96872.88045145324 0.005358195364827313 0.007947438011740615 1.8978941898518e-08 7.721728003734033 -0.04633981290210565 KGS(ph)LGAQK ddPTM_A549_MK2206_60min_R1 1 KGSLGAQK 8 1 H0Y6A0;Q9NP61-2;Q9NP61 H0Y6A0 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 1 KGS(1)LGAQK 42.001000000000005 0.034906 2266300.0 1855.5 2206.6 1831.4 1789.8 3028.7 2065.9 2100.3 1833.1 2724.2 3339.0 2759.9 True False 2168.663037380445 2318.906514849365 2091.1200585554134 2228.3010803471743 2583.1822420946287 2284.5121667665653 2481.8973232764474 2092.9475386333074 2107.1730496534783 2584.7175809637884 2074.5406606349975 1.0453702250967873 1.1177927523192384 1.0079918404276256 1.074117814429876 1.2451827486977 1.1012134927581017 1.1963599318013665 1.0088727487234093 1.0157299346489996 1.245922834875953 1.0 11.018576218719852 -8.337261060083677 13.34029169697929 1.0077262836852372 1.111933251794368 0.0 0.0946570595478795 1.2374010560008617 216.67227482314783 0.010080324014971245 0.012186453646937958 4.599799904825678e-09 8.337261060083677 0.10420696810913088 KGS(ph)LKNGSMGSPVNQQPK ddPTM_A549_MK2206_60min_R1 2 KGSLKNGSMGSPVNQQPK 18 2 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRW1;A0A0A0MRV9;Q5T586;A0A0A0MRW2;Q8IW50-3;Q8IW50-2;Q8IW50-7;Q8IW50-5;Q8IW50-6 Q5T593 FAM219A Protein FAM219A 1 KGS(0.333)LKNGS(0.333)MGS(0.333)PVNQQPK;KGS(0.78)LKNGS(0.11)MGS(0.11)PVNQQPK 98.816 3.2717e-07 17340900.0 3153.64 3479.7 3697.0 3618.8 4647.3 3027.64 2699.6 2403.8199999999997 5136.9 4334.4 5111.1 True False 3685.8973329045893 3656.8018669996072 4221.290191372373 4505.4061624541055 3963.6883262410824 3348.022855215222 3190.0823758115944 2744.5688463900033 3973.4003519436733 3355.256029628463 3841.872810816169 0.9594011864545708 0.951827935767284 1.098758443925581 1.1727109106188696 1.0317073264585859 0.8714559331036175 0.8303456498691043 0.7143830578313565 1.034235266913889 0.8733386540497343 1.0 11.907594042540557 -7.022548268418282 24.345648614864658 0.9662536111302197 1.0501937503809349 0.16947813423311642 0.11304784587460227 1091.7858561077173 1178814.5801223523 0.01869858486118447 0.03256011174393366 9.494054743816512e-08 7.022548268418282 0.0839401392507152 KGS(ph)LKNGSMGSPVNQQPK ddPTM_A549_PD325901_60min_R1 3 KGSLKNGSMGSPVNQQPK 18 2 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRW1;A0A0A0MRV9;Q5T586;A0A0A0MRW2;Q8IW50-3;Q8IW50-2;Q8IW50-7;Q8IW50-5;Q8IW50-6 Q5T593 FAM219A Protein FAM219A 1 KGS(0.333)LKNGS(0.333)MGS(0.333)PVNQQPK;KGS(0.992)LKNGS(0.006)MGS(0.002)PVNQQPK;KGS(0.494)LKNGS(0.494)MGS(0.012)PVNQQPK 113.17 3.5154000000000006e-10 46323200.0 4544.92 4135.14 4864.83 5746.6 5793.030000000001 7103.63 6594.2 6155.06 5685.84 6094.59 6985.0 True False 5006.316932606734 4483.622760075092 5194.98661839928 6101.554430524476 5386.147557668566 7045.780392481024 6845.145889484694 6032.292499748841 5446.883917841214 5709.776547290763 6125.8892815631925 0.8172392125456814 0.7319137767587875 0.8480379549193604 0.9960275398525474 0.8792433735097053 1.1501645016155264 1.1174126032747955 0.9847211110889572 0.8891580744422609 0.9320730892860266 1.0 12.5807035767731 -6.089225390491867 3.4508308631737408 0.9735399257704559 0.7753199880942643 0.523117844975181 0.08264439005945819 0.1701632549252889 3.809642336014446 0.01289384064138802 0.039015000790853474 8.142815778482888e-07 6.089225390491867 -0.19821993767619162 KGS(ph)PCDTLASSTEK ddPTM_A549_MK2206_60min_R1 1 KGSPCDTLASSTEK 14 1 Q15788-2;Q15788-3;Q15788 Q15788-2 NCOA1 Nuclear receptor coactivator 1 1 KGS(1)PCDTLASSTEK 98.796 1.5626e-05 6445800.0 1351.6 1326.2 1295.2 1046.3 1684.0 1369.5 1362.9 1421.1 1816.4 1958.3 1824.9 True False 1579.7170365526329 1393.697915341804 1478.8788357764386 1302.6435469701921 1436.2858307813099 1514.4195809994735 1610.5212883366514 1622.545276936225 1404.988300194765 1515.9186699015827 1371.7269653222252 1.1516264362285462 1.016016999428467 1.0781145761241508 0.949637631905993 1.047063932612799 1.104024065491582 1.1740829837505835 1.1828485682317118 1.0242477808728698 1.1051169133687522 1.0 10.421777634266544 -8.974195358856823 24.955733530031377 1.0106974828478843 1.0839463242877976 0.022409234645545117 0.07132957285995274 213.4704393552495 206449.9415845601 0.01217171207175759 0.012663843716631241 1.0612180816701235e-09 8.974195358856823 0.07324884143991328 KGS(ph)PTPGFSTR ddPTM_A549_MK2206_60min_R1 4 KGSPTPGFSTR 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 KGS(0.835)PT(0.165)PGFSTR;KGS(0.922)PT(0.078)PGFSTR;KGS(0.887)PT(0.107)PGFS(0.003)T(0.003)R;KGS(0.5)PT(0.5)PGFSTR 80.469 0.00070068 574567000.0 8757.7 10096.2 10047.1 8595.2 13746.2 9584.0 10237.699999999999 9873.1 14105.599999999999 14843.5 15706.099999999999 True False 10235.785654792082 10610.053455643143 11471.929857110448 10701.024385853187 11724.152189481027 10598.172518655681 12097.757571064729 11272.642160100651 10910.704122014575 11490.343040741529 11805.841903691931 0.8670102258095748 0.8987121411752227 0.9717163714959572 0.9064177271852806 0.9930805685119873 0.8977057803341763 1.0247263744300616 0.9548359407197773 0.9241784034565609 0.9732760386320488 1.0 13.527213306924713 -2.0000009416998608 0.010349086858618878 1.7632443296779492 5.964396794434204e-06 0.2852527848269413 0.04083405922730241 9258.882584151499 7.205001139277627 523.9891619357849 718.0140145955183 0.009999978316582893 2.0000009416998608 -1.7632383652811547 KGS(ph)PTPGFSTR ddPTM_A549_PD325901_60min_R1 3 KGSPTPGFSTR 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 KGS(0.582)PT(0.407)PGFS(0.009)T(0.003)R;KGS(0.878)PT(0.122)PGFSTR;KGS(0.5)PT(0.5)PGFS(0.001)TR 76.32600000000001 0.00099704 575378000.0 7463.7 6439.0 7193.900000000001 7592.599999999999 9598.8 8066.6 8280.1 7586.1 9460.0 8905.5 8964.4 True False 8221.409329514465 6981.6371276724685 7682.121314434945 8061.577657954298 8924.613402062305 8000.908284072708 8595.20373654457 7434.78928431968 9062.42909803616 8343.205210177857 7861.835630013614 1.045736608652581 0.8880416045610431 0.9771409217851635 1.0254065382870818 1.1351818865293233 1.0176895906508354 1.0932820451919938 0.9456810895328787 1.1527115961874246 1.0612286497477192 1.0 12.94065048583911 -6.35963080331971 3.4195563549611236 1.065312573767796 0.9611462656811893 0.2446454607615498 0.06549293282860637 0.2485807072658238 5.452978224114783 0.010260592680589015 0.02593901062629272 4.3688707508109e-07 6.35963080331971 -0.10416630808660665 KGS(ph)QITQQSTNQSR ddPTM_A549_PD325901_60min_R1 1 KGSQITQQSTNQSR 14 1 P50750;P50750-2 P50750 CDK9 Cyclin-dependent kinase 9 1 KGS(0.996)QIT(0.004)QQSTNQSR 61.766999999999996 0.0026731 19096000.0 2763.7 2741.4 3167.6 3179.5 3633.7 2816.5 2929.4 3001.7 3649.6 3538.9 3634.3 True False 3044.268789471593 2972.4273989441376 3382.5723843261826 3375.890493831585 3378.481447584468 2793.5633578075985 3040.879920029187 2941.828738711904 3496.220003825872 3315.45325004755 3187.3041397258567 0.9551234071228087 0.9325835466708235 1.061264390230774 1.0591679820432665 1.0599808802291 0.8764658894610151 0.9540601670635473 0.9229833770946421 1.096920736320628 1.0402061129731772 1.0 11.638120975550315 -8.76470947034468 24.99443977768324 1.0457681218599917 0.9802803943399575 0.19463522306552783 0.0614460977534365 117.11221270711673 895125.1217736884 0.011967946049918583 0.013002890618578308 1.719057999533568e-09 8.76470947034468 -0.06548772752003418 KGS(ph)SGNASEVSVACLTER ddPTM_A549_MK2206_60min_R1 2 KGSSGNASEVSVACLTER 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 KGS(0.813)S(0.185)GNAS(0.002)EVSVACLTER;KGS(0.954)S(0.046)GNASEVSVACLTER 138.54 1.3682000000000002e-13 84583000.0 5607.1 6205.200000000001 6050.8 5485.5 6863.200000000001 5663.4 5435.4 5190.3 7334.5 7989.8 7660.6 True False 6553.4413995666355 6521.018175447875 6908.894425197708 6829.447746253454 5853.632371626061 6262.6972289393325 6422.941823042801 5926.040919627109 5673.247460789753 6184.898630842909 5758.261598195755 1.138093726346166 1.1324629949933356 1.1998229513161547 1.1860259610979353 1.0165624245797011 1.0876020691560162 1.1154307100350063 1.0291371481774856 0.9852361453268049 1.0740912904653086 1.0 12.491417616781009 -7.665173665178074 0.635727352071445 0.9902073456289651 1.1622678763690795 0.49923436103705243 0.049772491361099576 0.3027959482664995 0.2466538523985007 0.009960698668244738 0.02110710420199163 2.1618538712200825e-08 7.665173665178074 0.1720605307401144 KGS(ph)SGNASEVSVACLTER ddPTM_A549_PD325901_60min_R1 1 KGSSGNASEVSVACLTER 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 KGS(0.883)S(0.114)GNAS(0.003)EVSVACLTER 163.74 1.9924e-23 39909000.0 6702.7 7439.9 8862.3 7237.9 6160.2 7017.3 7392.4 9267.3 8369.0 10015.0 12106.0 True False 7383.153169733054 8066.886483331319 9463.748971339168 7684.96864453644 5727.528803536296 6960.153435378398 7673.721827276497 9082.456431443787 8017.280033981462 9382.651190829412 10617.038746256841 0.6954060681313864 0.7598056931058477 0.8913736869120611 0.7238335310065496 0.5394657531560392 0.6555644753422681 0.7227742132882349 0.8554604206041831 0.7551333498531354 0.8837352311761482 1.0 13.374093812186473 -10.521927033616382 0.4967973291402614 1.042717057717633 0.7203270571163712 0.4247367274123891 0.09270864173290908 0.8503815346336013 0.3115671767644918 0.1299043604585759 0.023868872379925115 3.006581399867237e-11 10.521927033616382 -0.3223900006012618 KGS(ph)SSQAPASK ddPTM_A549_MK2206_60min_R1 2 KGSSSQAPASK 11 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 KGS(0.742)S(0.129)S(0.129)QAPASK;KGS(0.937)S(0.032)S(0.032)QAPASK 57.802 0.010103000000000001 12614900.0 2028.56 1612.54 1087.0900000000001 655.67 1515.8899999999999 1196.1599999999999 1221.3 1194.56 1236.96 1554.6100000000001 1167.13 True False 2370.9313344696693 1694.6113982847785 1241.2557084498217 816.3091794341443 1292.9045890873401 1322.7368572532532 1443.1944012367383 1363.8925381865713 956.7905350192235 1203.4225212764645 877.2994098506921 2.702533830352375 1.9316226356212698 1.4148598466070683 0.9304795720460729 1.4737324276866663 1.5077370877046075 1.6450420290176144 1.5546488722917216 1.0906088893665846 1.371735245417839 1.0 9.77692548784722 -2.000000000002232 0.6237236629189417 1.1510824642590443 118.92186765560643 0.6779565697818634 0.26625493183057436 70.09746323044448 0.4578145434226611 0.049819628395928656 11357.322156283246 0.009999999999948607 2.000000000002232 117.77078519134739 KGS(ph)SSQAPASK ddPTM_A549_PD325901_60min_R1 2 KGSSSQAPASK 11 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 KGS(0.937)S(0.032)S(0.032)QAPASK;KGS(0.921)S(0.033)S(0.045)QAPAS(0.001)K 66.498 0.004114199999999999 8358300.0 742.94 925.63 380.36 670.06 658.89 439.28 567.8 1471.3600000000001 1973.1999999999998 5676.2 6858.9 True False 818.3627218764791 1003.6360885987681 406.17351689048724 711.4480843833283 612.6118394471013 435.7026493228199 589.407939712082 1442.012570540409 1890.2732659878377 5317.803763293648 6015.298782149429 0.1360468950112659 0.1668472547992274 0.06752341514536547 0.11827310831085744 0.10184229605768617 0.07243242025080782 0.0979848152283253 0.23972418042136534 0.314244285187841 0.8840464881103468 1.0 12.554420683047622 -10.225950797584552 0.4801099591594799 1.096821658481177 0.08949090309562212 0.9754845918328949 0.049458143273107956 0.11881676559582131 0.04695994342192262 0.05388300245694552 0.013501273908987161 5.943594914216319e-11 10.225950797584552 -1.0073307553855548 KGS(ph)SSSVCSVASSSDISLGSTK ddPTM_A549_MK2206_60min_R1 1 KGSSSSVCSVASSSDISLGSTK 22 1 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 KGS(0.732)S(0.199)S(0.054)S(0.015)VCSVASSSDISLGSTK 200.03 7.438899999999998e-61 30048000.0 5810.5 4414.1 4516.1 3588.9 5039.5 3971.4 3892.5 2823.4 5138.3 4986.1 4254.8 True False 6791.170346914081 4638.758835854516 5156.550888086762 4468.180661111841 4298.196225785285 4391.6509119980365 4599.716864663888 3223.625596299862 3974.4832541790147 3859.7365470031564 3198.2157334938915 2.1234247195373106 1.4504208666333158 1.612321155850699 1.397085448088449 1.3439356766248283 1.373156559141924 1.4382134439814436 1.0079450121328155 1.242718936235452 1.2068405850741615 1.0 11.643051542787521 -2.0000000000000004 0.2209636839907368 1.0420947844912376 5.705052553221713 0.7449106103623437 0.14829155570290434 15.174996028080201 0.17649775830144032 0.0852589098308866 25.631696270754848 0.00999999999999999 2.0000000000000004 4.662957768730475 up KGS(ph)SSSVCSVASSSDISLGSTK ddPTM_A549_PD325901_60min_R1 2 KGSSSSVCSVASSSDISLGSTK 22 1 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 KGS(0.634)S(0.104)S(0.104)S(0.154)VCS(0.004)VASSSDISLGSTK;KGS(0.54)S(0.106)S(0.147)S(0.205)VCS(0.003)VASSSDISLGSTK 145.33 2.8131000000000004e-27 19029100.0 2735.3 2947.6000000000004 2914.1000000000004 3116.9 3416.3 3096.8 3351.2 4619.6 5227.5 10583.6 11131.7 True False 3012.9856423785673 3196.0045966031 3111.868349906849 3309.423834006498 3176.350873595184 3071.5806875407698 3478.731749847003 4527.458453993911 5007.806354120935 9915.349689791525 9762.571469660268 0.3086262314946635 0.32737323424832443 0.31875498782034933 0.3389909968179382 0.32536006353106056 0.31462824083659785 0.35633355009569634 0.4637567538495535 0.5129597636938175 1.0156493830141018 1.0 13.253045489611662 -10.174056923159597 0.40419780968224833 1.1096037842736897 0.2968506244273778 0.9915347980522009 0.02360060908190135 0.1081669287442049 0.03021101760406712 0.036236862326880316 0.008995076485827883 6.697968131141414e-11 10.174056923159597 -0.8127531598463118 KGS(ph)STDYQESMDTDKDDPHGR ddPTM_A549_MK2206_60min_R1 5 KGSSTDYQESMDTDKDDPHGR 21 2 E9PKG7;E9PL54;A0A669KBF4;O00327-3;O00327-5;O00327-4;O00327-6;O00327-8;O00327 E9PKG7 ARNTL Aryl hydrocarbon receptor nuclear translocator-like protein 1 1 KGS(0.631)S(0.169)T(0.169)DY(0.03)QES(0.001)MDTDKDDPHGR;KGS(0.325)S(0.325)T(0.325)DY(0.024)QESMDTDKDDPHGR;KGS(0.621)S(0.185)T(0.185)DY(0.01)QESMDTDKDDPHGR;KGS(0.82)S(0.158)T(0.023)DYQESMDTDKDDPHGR;KGS(0.612)S(0.135)T(0.135)DY(0.118)QESMDTDKDDPHGR 139.4 4.3041000000000007e-19 53707300.0 7197.73 7341.9 6842.52 6664.5 9934.9 6967.0 6850.41 6425.299999999999 10905.0 11131.400000000001 10381.3 True False 8412.530856396841 7715.571350209615 7812.892226202128 8297.30279918077 8473.489370682444 7704.243315679688 8095.04082385669 7336.105951655988 8435.034911706622 8616.809008906948 7803.336700695715 1.0780684185582832 0.9887528433217196 1.0012245435347626 1.0633019075597514 1.0858802709265358 0.9873011522100292 1.0373819731673206 0.9401242357005983 1.0809523201728033 1.104246726677667 1.0 12.929875435842417 -11.337875227614102 1.9687393752753484 0.9997836184276003 1.0363945219964175 0.0 0.05446967353201676 0.7779297458604144 5.447382616111776 0.035518256735703066 0.006812084439202455 4.5932995893627736e-12 11.337875227614102 0.03661090356881713 KGS(ph)VSVCSK ddPTM_A549_MK2206_60min_R1 2 KGSVSVCSK 9 1 P38432 P38432 COIL Coilin 1 KGS(0.992)VS(0.008)VCSK;KGS(0.989)VS(0.011)VCSK 84.71799999999999 0.00055665 6327000.0 4376.0 5015.700000000001 4368.4 4341.8 5644.5 4145.8 4247.1 3750.9 6139.7 5360.0 5201.8 True False 5114.561817071856 5270.977706213161 4987.904807138508 5405.541194910808 4814.201527223938 4584.5058042406845 5018.743094647145 4282.601561649486 4749.067753086214 4149.17227731833 3910.049497623511 1.3080555169903696 1.3480590742947904 1.275662829887475 1.3824738531305658 1.2312380009894917 1.1724930354531578 1.2835497600983024 1.0952806516266376 1.2145799576124676 1.0611559469618366 1.0 11.93297115550008 -14.999999998508216 0.08827407162235847 0.11628269521056694 1.4941554148047977 0.7489542120974224 0.05833006476800588 41.874149980344995 0.2703718872253907 7.0112678325227495 0.5792779437605543 1.0000000034349608e-15 14.999999998508216 1.3778727195942309 KGS(ph)VVNVNPTNTRPQSDTPEIR ddPTM_A549_MK2206_60min_R1 2 KGSVVNVNPTNTRPQSDTPEIR 22 2 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 KGS(1)VVNVNPTNTRPQSDTPEIR;KGS(1)VVNVNPTNTRPQSDTPEIR 140.9 2.0878e-27 26922000.0 2643.9 3509.0 2983.8 3042.1000000000004 4225.200000000001 3076.3 2964.0 2951.2 4270.1 5119.9 4143.9 True False 3090.125682851068 3687.59311184919 3406.9477070643425 3787.414636565058 3603.678677088594 3401.8320241173305 3502.52043336256 3369.5416376709477 3302.9291679485095 3963.311034075019 3114.855264178184 0.9920607607000191 1.1838730210862993 1.093774001715365 1.2159199434148735 1.156932945980519 1.0921316515856996 1.124456880434429 1.0817650747441583 1.060379660632465 1.2723901105949749 1.0 11.604949412757719 -8.999612004058386 0.6723274458184493 1.0106658430783522 1.1318326610877536 0.0 0.09596568965392037 0.40050199914912377 0.3947970892731539 0.01636663888343997 0.014085032213956152 1.000893792866298e-09 8.999612004058386 0.12116681800940143 KGS(ph)WSER ddPTM_A549_MK2206_60min_R1 2 KGSWSER 7 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 KGS(0.987)WS(0.013)ER;KGS(0.992)WS(0.008)ER 51.445 0.020804 39807000.0 7298.2 5996.6 4513.8 4340.3 7497.1 6025.9 6162.3 6761.700000000001 9316.599999999999 10479.400000000001 10173.5 True False 8529.957736141181 6301.801326450513 5153.924713501922 5403.67369484347 6394.28652134832 6663.5567383313055 7281.910143896797 7720.191681837783 7206.404975553046 8112.096261740613 7647.139175683963 1.1154442910185767 0.8240730528991422 0.6739676884514075 0.7066268274580164 0.8361671436137309 0.8713790327655851 0.9522397823033606 1.0095529196573418 0.9423661332681973 1.0608014416077454 1.0 12.900704415607738 -7.639077777531935 2.2944871938697915 0.9751290798587222 0.8159373548887173 0.3278587117346988 0.1097602907490399 0.2767102272940421 2.967485007432603 0.01706371282218473 0.026702020845284034 2.2957374690817154e-08 7.639077777531935 -0.1591917249700049 KGSDDAPYS(ph)PTAR ddPTM_A549_MK2206_60min_R1 2 KGSDDAPYSPTAR 13 1 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 KGSDDAPYS(0.889)PT(0.111)AR;KGSDDAPYS(0.97)PT(0.03)AR 87.287 8.1364e-05 46162000.0 3526.2 4277.200000000001 3736.5 3641.2 5348.6 4668.1 3711.8 3546.3 6347.0 6357.9 7035.4 True False 4121.336352687103 4494.891210601693 4266.391885329418 4533.294163459681 4561.828025247579 5162.075243566002 4386.186013682577 4048.998885088264 4909.414634076294 4921.645974246678 5288.316012837955 0.7793286828325153 0.8499664542909051 0.806758120160046 0.857228303387056 0.8626239457273831 0.9761283612844827 0.8294107241387693 0.7656499489173652 0.9283512222337248 0.9306641211113053 1.0 12.368592674921466 -11.07563419058228 0.13497656446597778 1.1931834390156113 0.7576550474244034 0.3406545053154437 0.06026971925768036 11.395168224034332 0.33985967063936245 0.9874177222298309 0.24795381391280497 8.40167367678613e-12 11.07563419058228 -0.43552839159120793 KGSDDAPYS(ph)PTAR ddPTM_A549_PD325901_60min_R1 1 KGSDDAPYSPTAR 13 1 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 KGS(0.002)DDAPY(0.001)S(0.499)PT(0.499)AR 53.188 0.0094091 26468000.0 3918.6 3944.3 4044.6 3549.2 4581.1 4032.1 3663.8 3896.1 3641.7 4568.4 4075.5 True False 4316.41338727915 4276.700003522052 4319.090878155601 3768.4260231819635 4259.339339937037 3999.2639144384943 3803.2279139082902 3818.389229068678 3488.652013352883 4279.950444351979 3574.2393367230893 1.2076453143276342 1.1965343113936482 1.2083944222144345 1.0543295141049247 1.191677148246613 1.1189132952985386 1.064066380455412 1.0683082103196337 0.9760543949894878 1.1974437191091671 1.0 11.803420527419405 -7.79626416900781 0.7003987974719168 0.9857385963122548 1.1883090051313312 0.18015360413311254 0.07605059452772735 0.20714966060941953 0.20589644225457696 0.008930531050546404 0.016603242971443357 1.5985853587159925e-08 7.79626416900781 0.2025704088190764 KGSGDYMPMS(ph)PK ddPTM_A549_MK2206_60min_R1 3 KGSGDYMPMSPK 12 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 KGSGDY(0.004)MPMS(0.996)PK;KGS(0.001)GDY(0.005)MPMS(0.994)PK;KGS(0.001)GDY(0.007)MPMS(0.992)PK 54.7 0.0033201 17885700.0 4944.0 4986.48 5266.0 4816.42 7193.0 5656.58 5013.299999999999 4809.5599999999995 7328.099999999999 7704.299999999999 8041.8 True False 5778.4263308051295 5240.27053302187 6012.797984248551 5996.443116217312 6134.919228509482 6255.155541066087 5924.151716793699 5491.3298586597575 5668.297050571054 5963.893279131268 6044.799117610975 0.955933558481738 0.8669056541109555 0.9947060054867346 0.9920003956371715 1.014908702364641 1.0347995722210614 0.9800411232085809 0.9084387672472465 0.9377147098332818 0.9866156282606654 1.0 12.56147868090374 -5.776301913078904 24.986885899399365 0.9763956192367258 0.9114195891387848 0.3307809614730276 0.03840608715935087 206.47860404209297 347133.60453486664 0.005868181545881242 0.018351923598949618 1.673778892944594e-06 5.776301913078904 -0.06497603009794095 KGSGDYMPMS(ph)PK ddPTM_A549_PD325901_60min_R1 8 KGSGDYMPMSPK 12 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 KGS(0.006)GDY(0.023)MPMS(0.971)PK;KGS(0.005)GDY(0.045)MPMS(0.951)PK;KGS(0.004)GDY(0.029)MPMS(0.967)PK;KGS(0.003)GDY(0.03)MPMS(0.967)PK;KGS(0.029)GDY(0.276)MPMS(0.696)PK;KGS(0.001)GDY(0.007)MPMS(0.992)PK;KGS(0.005)GDY(0.046)MPMS(0.949)PK;KGSGDY(0.001)MPMS(0.999)PK 55.656000000000006 0.0032806999999999997 80012000.0 15656.1 15917.2 16623.2 17041.2 19079.499999999996 19348.5 17553.699999999997 18700.5 19201.0 18179.8 20834.1 True False 17245.49574658835 17258.598305418254 17751.35031542209 18093.796220626755 17739.421740701742 19190.932230974726 18221.71565925321 18327.503857241558 18394.048743276144 17031.92432541592 18271.637778241344 0.9438396248816311 0.9445567230963028 0.9715248589571519 0.9902667971107456 0.9708720124600222 1.0503126465120778 0.9972677808309234 1.0030575299093736 1.0066995069911342 0.9321509397312085 1.0 14.157318335279944 -6.128525755144289 1.0965579641577852 1.0049332046475628 0.9382176242553073 0.29167775269813145 0.02769983558727565 0.2777976575185316 0.5423299503571494 0.0024175650198025008 0.014881224226486337 7.438309498867889e-07 6.128525755144289 -0.06671558039225545 KGSIT(ph)EYTAAEEK ddPTM_A549_PD325901_60min_R1 2 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.407)IT(0.593)EYTAAEEK;KGS(0.388)IT(0.612)EYTAAEEK 178.03 9.7677e-22 316183000.0 28797.0 27382.0 29397.0 27380.0 31437.0 25830.0 26821.0 27849.0 34917.0 40179.0 40703.0 True False 31720.45024076906 29689.57723713736 31392.057198521532 29071.200415508338 29228.973571762403 25619.649043909216 27841.68783201435 27293.529847882146 33449.55991713832 37642.09108300897 35696.789037575734 0.8886079419462339 0.8317156259036362 0.8794084298584143 0.8143925882215047 0.818812401894045 0.7177017803181414 0.7799493619077946 0.7645934153671914 0.9370467433899475 1.0544951548271062 1.0 15.123506687756036 -8.901439582125144 4.261888223308771 0.9733370299097499 0.811138029617033 0.7064968729192009 0.05288760154762205 0.09379579313760537 2.967744917416171 0.00933963743893085 0.00981236414110936 1.2547592844377738e-09 8.901439582125144 -0.16219900029271694 KGSIT(ph)EYTAAEEKEDGRR ddPTM_A549_PD325901_60min_R1 1 KGSITEYTAAEEKEDGRR 18 3 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.353)IT(0.647)EYTAAEEKEDGRR 263.71 1.4366999999999998e-100 410600000.0 13733.0 13319.0 13374.0 13160.0 14732.0 16212.0 14415.0 17977.0 18158.0 23566.0 24089.0 True False 15127.164050299727 14441.438873034565 14281.640064395258 13972.863311471494 13697.27514264095 16079.974847071477 14963.570713190673 17618.43463231633 17394.88240614593 22078.038738201274 21126.205712752446 0.716037903633992 0.683579392787852 0.6760153838592232 0.6613995670333283 0.6483547177793901 0.7611387991628377 0.7082942823073141 0.83396114152582 0.8233793915793327 1.0450546131373828 1.0 14.366746060644633 -9.334351078388943 0.37316743702217414 1.0191313398214843 0.6610873833427096 0.9146715887594562 0.03783058300627529 0.2201468879545488 0.07667316812433977 0.029953599076372163 0.016559588810409916 4.630724262587551e-10 9.334351078388943 -0.35804395647877474 KGSLKNGSMGS(ph)PVNQQPK ddPTM_A549_PD325901_60min_R1 1 KGSLKNGSMGSPVNQQPK 18 2 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRW1;A0A0A0MRV9;Q5T586;A0A0A0MRW2;Q8IW50-3;Q8IW50-2;Q8IW50-7;Q8IW50-5;Q8IW50-6 Q5T593 FAM219A Protein FAM219A 1 KGS(0.303)LKNGS(0.303)MGS(0.394)PVNQQPK 73.783 0.00011489 4879800.0 1401.9 1495.9 1630.6 1570.5 1876.7 2133.7 1543.2 1877.7 2385.6 1447.9 1904.3 True False 1544.2198559757662 1621.964742861507 1741.2623215943545 1667.506218135714 1744.8870662635259 2116.3238546259813 1601.9273204714427 1840.2478004728455 2285.341528147468 1356.4793468998398 1670.0831723522965 0.9246364980737738 0.9711880041141812 1.0426201224109113 0.9984569904905078 1.0447905201067733 1.2671966819743228 0.959190145132199 1.1018899123933292 1.3683998294100443 0.8122226301994597 1.0 10.705704237272947 -6.751352249668104 0.8392434504471172 1.164213813915306 0.9502298273986148 0.0 0.15332038396365638 0.7975791559393248 1.0187910155801456 0.025396863547357065 0.09796550365220565 1.7727510461333413e-07 6.751352249668104 -0.21398398651669115 KGSLLPT(ph)SPR ddPTM_A549_PD325901_60min_R1 1 KGSLLPTSPR 10 1 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128 H7C179 BRD8 Bromodomain-containing protein 8 1 KGS(0.001)LLPT(0.5)S(0.5)PR 42.788999999999994 0.045873000000000004 40442000.0 4215.5 3597.5 4339.3 5009.6 5592.5 5143.5 4717.8 5123.8 5841.6 4856.2 5412.8 True False 4643.454456712922 3900.673950427347 4633.790992330666 5319.031614372918 5199.702093077622 5101.613041321987 4897.338460679219 5021.601789456659 5596.097866711205 4549.578703235724 4747.059914566247 0.9781748156294775 0.8217031216434021 0.9761391420639083 1.1204896736296899 1.0953521098654035 1.074688993426816 1.0316571833550794 1.057834086746617 1.1788555374116312 0.9583992587233717 1.0 12.2128185433829 -6.04545273285927 4.606512770759783 1.0820507406744257 0.8983712657057188 0.47184578995370796 0.06656031259220042 0.11515538668505237 5.4433495475041065 0.00982653641357048 0.02849172772250626 9.006317791296367e-07 6.04545273285927 -0.18367947496870696 KGSLLPTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KGSLLPTSPR 10 1 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128 H7C179 BRD8 Bromodomain-containing protein 8 1 KGS(0.001)LLPT(0.071)S(0.928)PR;KGSLLPT(0.148)S(0.852)PR 52.693000000000005 0.01822 28783100.0 5649.0 7517.7 7102.7 6328.4 9263.9 7906.799999999999 7088.1 6668.200000000001 10229.9 9312.4 9558.1 True False 6602.413095209989 7900.318819307106 8109.969662499473 7878.858284092671 7901.192581814119 8743.492327890935 8375.916020147492 7613.4377705060415 7912.8439837934575 7208.722372257316 7184.559979859912 0.9189725068366296 1.0996245895995915 1.128805338842422 1.0966375541688076 1.0997462063039496 1.2169836917502386 1.1658217126208485 1.0596943712417155 1.101367934288962 1.003363099823112 1.0 12.810684085838325 -10.478543638804062 0.7546826093781585 0.9983984909627348 1.1044527624478389 0.2188858748548963 0.06980731933177914 0.8310707924644165 0.8337634727757087 0.05075478999413134 0.013767144716757338 3.3224339903268795e-11 10.478543638804062 0.10605427148510405 KGSLLPTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 KGSLLPTSPR 10 1 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128 H7C179 BRD8 Bromodomain-containing protein 8 1 KGS(0.001)LLPT(0.124)S(0.875)PR 45.915 0.032884 3839100.0 3343.4 2812.9 3317.8 3738.7 4543.0 3618.1 3758.6 4106.3 4427.1 3871.4 4444.2 True False 3682.819506719009 3049.9529548734095 3542.9658595521582 3969.6310077962385 4223.915352499173 3588.6353931772296 3901.635579784838 4024.3966251699694 4241.044382654956 3626.959143302742 3897.591574104961 0.9448962100562648 0.7825224621114379 0.9090141417307844 1.0184830637899305 1.083724467325479 0.9207315145639189 1.0010375652766557 1.0325342069978503 1.0881192403103102 0.9305641892803078 1.0 11.928367204174007 -6.188768280609983 3.4962796356928263 1.032396811401414 0.8608454589389182 0.43483592535317817 0.06343970213667104 0.12230653631414785 2.9130692217273784 0.00811936356148396 0.02317724022960029 6.474879931599681e-07 6.188768280609983 -0.17155135246249575 KGSPCDT(ph)LASSTEK ddPTM_A549_MK2206_60min_R1 1 KGSPCDTLASSTEK 14 1 Q15788-2;Q15788-3;Q15788 Q15788-2 NCOA1 Nuclear receptor coactivator 1 1 KGS(0.316)PCDT(0.677)LAS(0.005)S(0.001)TEK 93.152 3.6213e-05 4193800.0 1815.0 1837.8 1792.3 1733.5 2047.2 2034.2 2140.2 1613.6 2550.0 2123.5 2522.2 True False 2121.327627510377 1931.3361701215276 2046.4750906131196 2158.207577819772 1746.0595919094408 2249.457693807324 2529.046636802479 1842.3327414427492 1972.4290715132418 1643.7998751651999 1895.8681308212585 1.118921507790446 1.0187080729527875 1.0794395756452853 1.1383743113424625 0.9209815617044402 1.1865053572227602 1.3339781368163715 0.9717620711545383 1.0403830516729127 0.8670433604752527 1.0 10.888642904158553 KGSPT(ph)PGFSTR ddPTM_A549_PD325901_60min_R1 1 KGSPTPGFSTR 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 KGS(0.215)PT(0.446)PGFS(0.323)T(0.016)R 63.681999999999995 0.0040782 570110000.0 3105.2 3089.4 3152.8 2875.1 3813.9 3094.0 3338.9 3412.3 3178.0 3734.0 3756.8 True False 3420.4376180725785 3349.754580250242 3366.7679673265557 3052.688397174143 3546.0248212407196 3068.80348981243 3465.963666616188 3344.2389996024335 3044.439711792698 3498.2346027515737 3294.7374163173386 1.0381518117749549 1.016698497324985 1.0218623040041013 0.9265346555557246 1.076269326860122 0.9314258170056405 1.051969619627605 1.0150244395926473 0.9240310613874629 1.0617643109968053 1.0 11.685947774698965 -8.727024479904351 24.974213582037518 0.9641257608762162 1.008619004125663 0.0 0.05455121655090541 244.16913028360582 177188.56809842613 0.007876348144803789 0.008930741049152919 1.874888823112767e-09 8.727024479904351 0.04449324324944692 KGSPVSEIGWETPPPES(ph)PR ddPTM_A549_PD325901_60min_R1 1 KGSPVSEIGWETPPPESPR 19 1 Q13884;A0A3B3ITC2;Q13884-2 Q13884 SNTB1 Beta-1-syntrophin 1 KGSPVSEIGWETPPPES(1)PR 74.123 0.00021113 3662800.0 2059.9 2753.1 1987.7 2486.5 2670.5 2778.2 2550.8 2150.5 2972.4 3143.1 3125.0 True False 2269.019531581768 2985.113399005292 2122.5972750110986 2640.0854577487767 2482.9332927248606 2755.575260309273 2647.8720898513197 2107.606590465386 2847.480364799436 2944.644129595199 2740.644811007156 0.827914482923429 1.0892011204867866 0.7744882760750993 0.9633081408964392 0.9059668304162373 1.0054477870471037 0.9661493088111103 0.7690185105347032 1.038981904317991 1.0744347891301813 1.0 11.420299650913087 KGSS(ph)GNASEVSVACLTER ddPTM_A549_PD325901_60min_R1 1 KGSSGNASEVSVACLTER 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 KGS(0.462)S(0.537)GNAS(0.001)EVSVACLTER 160.23 3.886199999999999e-23 51957000.0 7581.4 10142.0 9566.0 8482.4 9716.2 8821.8 9610.7 11527.0 10085.0 12624.0 14071.0 True False 8351.058146868307 10996.701933352095 10215.206285031032 9006.338583071876 9033.76763107032 8749.95818565847 9976.440447676829 11297.08494224344 9661.162521532206 11826.918485574679 12340.356203418136 0.676727479272856 0.8911170595145491 0.8277886080955701 0.7298280888016202 0.7320508000059245 0.7090523191895249 0.8084402332659952 0.9154585780201611 0.782891706064058 0.9583936063611161 1.0 13.5910964179175 -11.300260317072398 0.37891274439709594 1.124010392818364 0.772818781689511 0.5496558012509966 0.06890883926619266 2.0891513393766243 0.27530675736471943 0.3117605024426635 0.021642191741976288 5.008869109076765e-12 11.300260317072398 -0.351191611128853 KGSS(ph)SQAPASK ddPTM_A549_MK2206_60min_R1 2 KGSSSQAPASK 11 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 KGS(0.06)S(0.916)S(0.024)QAPASK;KGS(0.058)S(0.471)S(0.471)QAPASK 118.21 6.7096e-06 318660000.0 21207.1 15762.800000000001 13687.1 9168.4 17573.2 11601.400000000001 12304.4 11933.0 14424.8 18251.0 17806.5 True False 24786.340016184768 16565.05919163761 15628.136591380253 11414.658411585118 14988.20555907728 12829.05244761394 14539.950209266623 13624.539293279837 11157.605831672234 14128.086424130002 13384.654615600968 1.8518475618559596 1.2376157373780574 1.1676159781638529 0.8528168069634274 1.1198051791046768 0.9584896148654126 1.0863149350390453 1.0179223659159096 0.8336117854447348 1.0555435930085562 1.0 13.70829229097576 -2.0000034484756717 0.7637291034233896 0.9456127533773598 178.69645553149246 0.8602237739725269 0.09824292330189666 91.62024084217725 0.3491030399371278 0.015686235191998885 28093.24427485964 0.009999920596228498 2.0000034484756717 177.7508427781151 up KGSS(ph)SQAPASK ddPTM_A549_PD325901_60min_R1 2 KGSSSQAPASK 11 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 KGS(0.042)S(0.836)S(0.122)QAPASK;KGS(0.069)S(0.817)S(0.114)QAPASK 139.6 3.7006999999999994e-09 113521000.0 5856.200000000001 5386.799999999999 5824.799999999999 5589.6 6583.8 6284.299999999999 5215.5 9094.9 17051.8 37994.0 44620.0 True False 6450.717112893415 5840.764540976244 6220.105955367838 5934.856897097351 6121.376600876967 6233.122744353023 5413.978706531108 8913.495084688977 16335.172145231812 35595.052355903375 39132.02286948456 0.16484496941055743 0.14925792516417327 0.1589518123331754 0.15166241001370254 0.1564288312233013 0.1592844501073227 0.1383516186880533 0.2277800745036308 0.41743745780058056 0.9096144217901053 1.0 15.256062069607777 -9.922796428667764 0.5017070803978602 1.0408234678726342 0.128456555893921 0.9817106538012952 0.04118058303959513 0.09683035701059697 0.0482390299777978 0.03888700784024931 0.013611366935323407 1.1945479060149542e-10 9.922796428667764 -0.9123669119787132 KGSS(ph)SSVCSVASSSDISLGSTK ddPTM_A549_MK2206_60min_R1 1 KGSSSSVCSVASSSDISLGSTK 22 1 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 KGS(0.26)S(0.564)S(0.175)SVCSVASSSDISLGSTK 271.22 2.8285999999999992e-124 21170000.0 5637.1 6394.3 5313.0 5221.8 5912.9 4300.6 4618.4 3806.0 6028.4 5718.2 4913.1 True False 6588.504666137054 6719.742557736467 6066.463290982257 6501.141234415512 5043.120242771269 4755.686637492761 5457.503498462093 4345.512155386158 4662.977025376637 4426.454648537622 3693.0416753381683 1.7840320379091719 1.81956856934769 1.6426739323018218 1.7603758110366325 1.3655736073732434 1.2877424777659157 1.4777801005894025 1.1766756341812048 1.2626386148078474 1.1985932024805261 1.0 11.850593827862113 -3.7334522007285944 0.14840663161552373 0.8894395968041393 3.3564593137032617 0.8248619430057775 0.11205229212651127 8.43866342298363 0.1259504164523813 0.2072232614400434 4.152133316754956 0.00018473441059043997 3.7334522007285944 2.4670197168991224 up KGSSAVGSDS(ph)D ddPTM_A549_PD325901_60min_R1 1 KGSSAVGSDSD 11 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01;A0A096LPB9 Q68E01-4 INTS3 Integrator complex subunit 3 1 KGSSAVGS(0.115)DS(0.885)D 64.12100000000001 0.0051221 6022100.0 1163.2 1672.7 1351.8 1351.6 1333.0 1113.0 1356.5 1480.9 1497.7 1367.0 1568.1 True False 1281.287207697419 1813.6642993411601 1443.5412770337603 1435.0852622936848 1239.3746786003517 1103.9360970139746 1408.1223498052823 1451.3622877564244 1434.756877392045 1280.6873867063214 1375.233641004902 0.9316869290378652 1.3188044891164028 1.049669840812609 1.0435210567166233 0.9012102683110076 0.8027262161848465 1.0239149972919133 1.0553568822646704 1.0432822719081019 0.9312507697023071 1.0 10.42546102626996 -5.988771765700089 24.99518212418501 1.0023391028129833 1.1399935844546 0.18676545528738153 0.11165900651001069 254.0364920692585 565501.771852848 0.014341994822290035 0.04453893328894592 1.0261910776340005e-06 5.988771765700089 0.13765448164161675 KGSTFRPHDS(ph)FPK ddPTM_A549_PD325901_60min_R1 1 KGSTFRPHDSFPK 13 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KGS(0.005)T(0.005)FRPHDS(0.989)FPK 53.169 0.004629100000000001 7291800.0 2232.1 2015.2 2157.8 2183.2 2287.2 2289.9 2167.0 1549.9 2382.3 2336.2 2471.5 True False 2458.701148814828 2185.0279763450144 2304.2412839054946 2318.0513055930523 2126.554962411646 2271.2518136139247 2249.4663708279004 1518.9860286269725 2282.180215671409 2188.691933301612 2167.521168129339 1.134337779472202 1.0080768799276754 1.0630767153679752 1.0694480587673463 0.9810999743301015 1.0478568085100224 1.0378059526723256 0.7007940918694329 1.0528986979356818 1.0097672703194611 1.0 11.081830367616048 -6.753327381668096 24.546631161489735 1.0007943057073199 1.0639980081941804 0.14320477406370147 0.09764227867396665 305.657137053436 924897.3130619968 0.014058371458598097 0.028846690415133425 1.764707040379638e-07 6.753327381668096 0.06320370248686058 KGSVVNVNPTNTRPQSDT(ph)PEIR ddPTM_A549_PD325901_60min_R1 2 KGSVVNVNPTNTRPQSDTPEIR 22 2 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 KGSVVNVNPT(0.003)NT(0.003)RPQS(0.098)DT(0.897)PEIR;KGSVVNVNPT(0.014)NT(0.014)RPQS(0.164)DT(0.808)PEIR 130.23 3.4597e-22 13379800.0 3056.7 3014.3 3478.2 3593.6000000000004 3613.6 3605.6000000000004 3301.3 3274.1000000000004 3983.0 3704.6000000000004 4052.9 True False 3367.013933776391 3268.325639686772 3714.2515681157115 3815.56851034225 3359.793202243235 3576.2371890328695 3426.9327780406747 3208.7955070182375 3815.6083612556026 3470.6909237690093 3554.4189934498895 0.9472754731451609 0.9195105151389488 1.0449672857815475 1.0734717874773934 0.9452439930224005 1.0061383296744664 0.9641330367511125 0.9027623116271408 1.0734829991306694 0.9764439505204155 1.0 11.795398040351415 -8.789379993622354 24.999982550450117 1.0347002963981735 0.9787990415410089 0.0764887813266183 0.05378587163204672 273.31384017178027 244547.44251434694 0.009618014903481737 0.010240186413004337 1.6241270752282044e-09 8.789379993622354 -0.05590125485716457 KGTDVNVFNTILTTR ddPTM_A549_MK2206_60min_R1 2 KGTDVNVFNTILTTR 15 1 P04083 P04083 ANXA1 Annexin A1 0 ; 101.15 7.294700000000001e-06 6551800.0 1918.21 2429.6 2536.1 2504.7 3124.8 2548.3 2588.3999999999996 2134.68 4008.9 3196.0 3757.6000000000004 False True 2241.956952268146 2553.2562623393524 2895.7571150498984 3118.3516124402554 2665.1460593975294 2817.959414575363 3058.678775207709 2437.2774271833223 3100.890550897818 2474.0213802816 2824.4842155158044 0.7937580036568631 0.9039725725190783 1.0252339521469331 1.1040428533146485 0.943586813039004 0.9976899141781007 1.0829158677557473 0.8629106205637723 1.0978608178667184 0.8759197048052176 1.0 11.46377172293117 -5.53823290773968 2.5057768829539877 1.030297299333683 0.7936807026341097 0.311882479763245 0.08226832063825901 0.19191883398909623 2.0991557564377805 0.009571264919226226 0.07404963936987574 2.895790188202489e-06 5.53823290773968 -0.23661659669957325 KGTDVNVFNTILTTR ddPTM_A549_PD325901_60min_R1 2 KGTDVNVFNTILTTR 15 1 P04083 P04083 ANXA1 Annexin A1 0 ; 119.23 6.9814e-07 11572800.0 3869.3 4467.3 4512.3 4559.0 5004.7 5731.7 5229.6 4934.299999999999 5562.8 5713.5 5424.1 False True 4262.108487571891 4843.775048990715 4818.531812664178 4840.599075759768 4653.187137277707 5685.0229355390775 5428.615289746922 4835.881515616531 5329.01486115809 5352.748634927987 4756.97008620285 0.8959712611886588 1.0182479522079892 1.0129413734679311 1.0175803059597697 0.978182972134688 1.1950932699845975 1.1411918072581781 1.0165885906330494 1.1202540198044133 1.1252432825787861 1.0 12.215827237727328 -3.8730016324511523 0.6673298456563591 1.0651635448401593 2.3480968352214347e-14 0.400643290076503 0.06427515246463383 14.258755522676019 1.0534669060470199 0.011330370084178545 17.634620332920473 0.00013396716517813828 3.8730016324511523 -1.0651635448401358 KGTENGVNGTLTSNVADS(ph)PR ddPTM_A549_MK2206_60min_R1 10 KGTENGVNGTLTSNVADSPR 20 1 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGT(0.001)LT(0.031)S(0.099)NVADS(0.869)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLT(0.006)S(0.006)NVADS(0.989)PR;KGTENGVNGT(0.002)LT(0.005)S(0.024)NVADS(0.969)PR 292.25 3.8447999999999994e-144 1605327200.0 24018.289999999997 27543.8 25062.970000000005 23531.94 36551.85 28575.829999999998 23546.240000000005 26586.039999999997 40378.270000000004 37449.83 42041.82 True False 28071.990161188 28945.661770918112 28617.276015055453 29297.266356388915 31175.121284942925 31599.705363499244 27824.287020532665 30354.692586332807 31232.656315847442 28989.887392963486 31601.675798796226 0.8883070106762289 0.9159533802957599 0.9055619770691257 0.9270795176471277 0.9865021552474268 0.9999376477592667 0.8804687193706529 0.9605405985301919 0.9883227875224629 0.9173528510810104 1.0 14.947713444360332 -2.00000000001952 0.14980151777989223 1.015876473993229 0.5472791358260292 0.11584960319056758 0.040780178498276545 36.00692667879688 0.33672298366455605 0.058734549619772314 3.697496973393777 0.009999999999550537 2.00000000001952 -0.46859733816719973 KGTENGVNGTLTSNVADS(ph)PR ddPTM_A549_PD325901_60min_R1 4 KGTENGVNGTLTSNVADSPR 20 1 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR 284.86 2.2884999999999995e-127 2448678000.0 25150.5 25279.1 26693.4 26945.199999999997 32351.5 31302.3 29971.5 30460.7 29919.9 27429.399999999998 31830.600000000002 True False 27703.76024518048 27409.458474009167 28504.974644454043 28609.54380701078 30079.24224661613 31047.384447044496 31112.081833534117 29853.137442543117 28662.470652254957 25697.503002869304 27915.637990798212 0.9924100697362686 0.9818675282665617 1.0211113446108626 1.0248572436869006 1.077505097914334 1.112186096455277 1.1145037001765656 1.0694055228966488 1.0267532005431121 0.9205414904484694 1.0 14.76878590774873 -5.932754839837843 2.633573702048216 1.036539691304936 0.9864782135893931 0.137591357606471 0.05194805275365072 0.4438105040403008 6.100818861625583 0.006913669581663906 0.026994287730049703 1.1674684695249892e-06 5.932754839837843 -0.050061477715542924 KGTENGVNGTLTSNVADSPR ddPTM_A549_MK2206_60min_R1 2 KGTENGVNGTLTSNVADSPR 20 1 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 0 ; 197.0 1.0155e-54 23868000.0 2082.04 2499.08 2592.8999999999996 2057.82 3648.4 2539.27 2638.0 2356.87 4166.299999999999 3647.3 3528.9 False True 2433.437451009206 2626.272497566279 2960.612209145096 2561.9859923790505 3111.7251930062557 2807.9738659689915 3117.290453174908 2690.9635401116584 3222.639702213969 2823.372396840139 2652.5767373147014 0.9173862594726147 0.9900835141248162 1.116126884284686 0.9658480210350637 1.1730952583699301 1.058583462060971 1.1751933164921944 1.0144715145303647 1.2149091322712733 1.0643885837958227 1.0 11.373178772632285 -4.6981020318678794 0.7539923325214015 1.1007770272869766 0.5971668445715094 0.3209747213213291 0.07573193642004121 5.265946965246122 1.1764429625747588 0.013969315320858417 2.7356612751241745 2.0040011579187368e-05 4.6981020318678794 -0.5036101827154672 KGTENGVNGTLTSNVADSPR ddPTM_A549_PD325901_60min_R1 2 KGTENGVNGTLTSNVADSPR 20 1 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 0 ; 180.63 6.141399999999999e-36 16891800.0 2852.5 2874.8999999999996 2643.95 2665.0 3895.8999999999996 3555.2 2965.0 3541.7 3830.8 3158.6 3307.3 False True 3142.083700100488 3117.1779124624254 2823.384346362928 2829.6109973458624 3622.2654241253654 3526.2476299228047 3077.834697510254 3471.058015090099 3669.8047979658472 2959.165456949953 2900.5230667020696 1.0832817487892195 1.074695094911517 0.9734052381018128 0.9755519719286925 1.2488317937233044 1.2157281803423792 1.0611309156075046 1.196700710619321 1.2652217250381879 1.020217867225776 1.0 11.502097377209266 -6.743404813886033 24.997944704308214 1.1425908892156316 1.0263501782066224 0.28555196267933003 0.08919210025951221 315.8213230069899 437761.9180344865 0.015728387893816566 0.032687752350859224 1.805490410553981e-07 6.743404813886033 -0.11624071100900912 KGTVEGFEPADNK ddPTM_A549_PD325901_60min_R1 1 KGTVEGFEPADNK 13 1 H0YLA2;P37108 H0YLA2 SRP14 Signal recognition particle 14 kDa protein 0 103.21 0.0001264 3508200.0 2623.7 2556.2 2815.7 2731.7 3578.1 3205.9 2721.7 3176.5 2578.1 3529.3 3310.7 False True 2890.0560925341456 2771.61994498468 3006.790334179581 2900.4309048591704 3326.786599774885 3179.7922133127554 2825.275782871387 3113.142215583958 2469.7514225842524 3306.4593956858944 2903.5048882564424 0.9953680822867934 0.9545773303826054 1.0355726785034487 0.9989412852688124 1.1457830201114707 1.0951564869664208 0.9730570092368496 1.072201472150234 0.850610389041687 1.1387821005775631 1.0 11.503579747584174 -8.747212292351515 24.98226693123926 0.9294549001626576 1.0338353329478105 0.0 0.08813815596214937 216.63595670036773 380404.98639467114 0.01260651602672961 0.014261830892673777 1.7897307818202682e-09 8.747212292351515 0.10438043278515285 KGVAINMVTEEDKR ddPTM_A549_PD325901_60min_R1 1 KGVAINMVTEEDKR 14 2 P60842 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 84.759 7.356600000000001e-05 6427500.0 3282.5 3378.5 3228.5 3252.9 4386.2 4005.3 3747.5 3608.9 3887.7 4240.7 4282.1 False True 3615.7369835512195 3663.2180518467817 3447.6054245476366 3453.8242451280894 4078.12844356854 3972.6821647529846 3890.1131632106835 3536.917658372718 3724.313488840928 3972.9414782776084 3755.4288464683946 0.9628026868226937 0.9754460014045192 0.9180324179992825 0.919688372840845 1.085928827383752 1.0578504685260899 1.0358638979058135 0.9418145844245819 0.9917145660590195 1.0579195188357151 1.0 11.874761948552468 -6.703152330198155 24.99996512508916 1.0048232387798213 0.9443847306982004 0.4085736227055904 0.04258297136174404 74.01470352572748 31745.143821485563 0.005955945107107462 0.012398284649291496 1.9808321206509865e-07 6.703152330198155 -0.06043850808162088 KGVDLLLEGVQGES(ph)SPTRR ddPTM_A549_MK2206_60min_R1 1 KGVDLLLEGVQGESSPTRR 19 2 Q96S38-2;Q96S38;F5H7T0;F6RJM5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 KGVDLLLEGVQGES(0.452)S(0.452)PT(0.097)RR 48.115 0.0062581 2892500.0 2635.3 2318.7 2849.4 2475.4 3462.2 2614.2 2382.5 2381.4 3819.5 4480.8 4360.8 True False 3080.074213100882 2436.711926031551 3253.4877661066894 3081.8731111249285 2952.9149663486064 2890.8329088344835 2815.3694104204797 2718.970742731632 2954.3893484881687 3468.5841679492487 3277.8930080427212 0.9396506248201311 0.7433775050170255 0.992554594711862 0.9401994218734921 0.90085764212049 0.8819180192097371 0.8588960663183997 0.8294873371584419 0.9013074378081298 1.0581749189002334 1.0 11.678553049628656 -10.25397149427109 0.840477299333815 0.9954152382766837 0.886428118301855 0.3885192257848701 0.06514620531829061 0.5192765409354385 0.7091048187583497 0.031200641578572424 0.01180463717913104 5.5722232205878196e-11 10.25397149427109 -0.10898711997482868 KGVEPSPS(ph)PIKPGDIK ddPTM_A549_MK2206_60min_R1 2 KGVEPSPSPIKPGDIK 16 2 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 KGVEPS(0.389)PS(0.611)PIKPGDIK;KGVEPS(0.33)PS(0.67)PIKPGDIK 92.098 1.8405000000000002e-06 23713000.0 6846.700000000001 6787.1 7115.9 6669.6 9361.7 7144.0 6876.799999999999 7129.4 10527.3 10003.099999999999 9022.8 True False 8002.255574256365 7132.534399952013 8125.041620986377 8303.65229940972 7984.606331368997 7899.973338196597 8126.225545258989 8140.014282871804 8142.883358643665 7743.392762545332 6782.1897433883305 1.1798926124202622 1.0516565696064784 1.1979968016829867 1.2243320540397147 1.1772903197161142 1.1648116076224417 1.1981713654031727 1.2002044458881675 1.2006274767794305 1.1417245838770638 1.0 12.727535431457774 -10.717497590911165 0.8948544500665595 0.9961449500063704 1.1772415606956934 0.21109110230772055 0.05906715174791299 0.282727309385912 0.3888521411106141 0.03416433646808779 0.008159526755643815 1.916471693627434e-11 10.717497590911165 0.18109661068932303 KGVEPSPS(ph)PIKPGDIK ddPTM_A549_PD325901_60min_R1 2 KGVEPSPSPIKPGDIK 16 2 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 KGVEPS(0.041)PS(0.959)PIKPGDIK;KGVEPS(0.022)PS(0.978)PIKPGDIK 90.316 2.1845e-06 26989000.0 5770.9 6362.7 6048.0 5899.9 8252.8 7175.3 6915.6 6732.5 7707.7 6569.7 7780.5 True False 6356.757519687955 6898.907058897591 6458.453649578468 6264.323423354914 7673.1517986143945 7116.866735763137 7178.776942361526 6598.2150059559235 7383.772173248764 6154.888020807987 6823.547824653172 0.9315912605933933 1.0110439959066675 0.9464949635502465 0.9180449209606466 1.1245105912340265 1.0429862761495152 1.0520592991852313 0.9669771760251857 1.0821016226443856 0.9020070173129956 1.0 12.736306331560868 -6.739993747522118 24.99974093178673 1.0403740907457104 0.9556474557232462 0.22302729012138744 0.06050646153964331 180.5482626039942 210468.85685874004 0.006661077539124591 0.013855920146782864 1.819727056781376e-07 6.739993747522118 -0.08472663502246425 KGVLGKS(ph)PLSALAR ddPTM_A549_MK2206_60min_R1 1 KGVLGKSPLSALAR 14 2 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KGVLGKS(0.823)PLS(0.177)ALAR 63.578 0.0018213 19960000.0 5662.6 6069.1 5825.5 5423.8 7180.3 5751.6 4748.0 5480.9 8181.9 8397.9 8178.3 True False 6618.308442721911 6377.991266777976 6651.643497387 6752.631243483636 6124.0873816858975 6360.230494396912 5610.650140892519 6257.834359552282 6328.712713809489 6500.808557405146 6147.402400402627 1.0766024430560202 1.0375099678459714 1.082025067523048 1.098452777882471 0.9962073381246033 1.0346208170755742 0.9126863308191842 1.017964003648504 1.0294938091892256 1.0574886974991864 1.0 12.585761209632224 -6.770078092829238 24.99827358811073 1.0073191353592679 1.071664701766729 0.42974769618505704 0.036946737857062005 130.32103776670414 377116.78121444583 0.004924566009938563 0.009407508477018689 1.697938309579943e-07 6.770078092829238 0.06434556640746103 KGVLGKS(ph)PLSALAR ddPTM_A549_PD325901_60min_R1 2 KGVLGKSPLSALAR 14 2 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KGVLGKS(0.831)PLS(0.169)ALAR;KGVLGKS(0.93)PLS(0.07)ALAR 92.56299999999999 1.9982999999999998e-05 66238000.0 24469.0 23351.0 24147.0 24620.0 30868.0 28849.0 28344.0 28509.0 30297.0 26896.0 30034.0 True False 26953.074866874253 25318.870720341623 25785.760627706906 26140.72148392312 28699.93816881896 28614.06330885545 29422.646430431927 27940.365630122156 29023.722450655558 25197.781969899926 26340.008401212446 1.0232751051679083 0.9612324466523777 0.9789579500103718 0.992434060222997 1.089594875280977 1.0863346310678599 1.1170325378133739 1.0607576582563294 1.1018873649759193 0.9566353049735572 1.0 14.68496818529519 -6.6965089294509275 7.632217148386836 1.060723969659188 0.9857340156416742 0.35046751264803944 0.04569052000324536 0.19987735908095497 20.149080992495705 0.006469984571226046 0.013483362761230805 2.0113658424435194e-07 6.6965089294509275 -0.07498995401751374 KGVLGKSPLS(ph)ALAR ddPTM_A549_PD325901_60min_R1 1 KGVLGKSPLSALAR 14 2 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KGVLGKS(0.391)PLS(0.609)ALAR 84.375 5.0736000000000003e-05 64277000.0 2212.5 2307.4 2605.6 1976.2 2552.1 2508.3 2488.1 2645.4 2710.9 2538.8 2493.7 True False 2437.1113712435854 2501.8526958210055 2782.4316847456453 2098.2653857241626 2372.849300267034 2487.8732364242155 2582.786007040562 2592.6354217238454 2596.97030040869 2378.4997347256804 2186.9907088667337 1.1143675011342231 1.1439704273446267 1.2722649773795611 0.9594304069135495 1.084983713303752 1.1375783291340065 1.180977128329422 1.1854807664305582 1.1874628867327934 1.0875673705802726 1.0 11.094731375966996 -10.866087958556715 1.119416670847789 1.000177257818027 1.14331544630056 0.1587660614765577 0.07773361850219407 0.46885794664614605 1.045170030466558 0.051841648227958004 0.012632604793581349 1.361168974188626e-11 10.866087958556715 0.1431381884825329 KGVNLPGAAVDLPAVSEK ddPTM_A549_MK2206_60min_R1 2 KGVNLPGAAVDLPAVSEK 18 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 123.41 1.7572999999999997e-10 17137800.0 3656.0 4008.7 3991.9 3645.2 5225.700000000001 3537.4 3735.0 3642.8 5413.0 5020.700000000001 5386.3 False True 4273.043419381788 4212.725707457918 4558.011445750439 4538.274163639245 4457.006452442934 3911.7253200639207 4413.60115337691 4159.178055607122 4186.964142784775 3886.5203829724114 4048.7330556825596 1.0554026063497568 1.0405046836923932 1.1257871000788966 1.1209121720854367 1.1008397913977919 0.9661603435607238 1.0901190798890144 1.0272789038955157 1.0341418130563589 0.9599349548416198 1.0 11.983254809884736 -7.235953683850347 24.958774684579105 1.020471364883581 1.089863507298425 0.4578927885603201 0.040582465166045044 531.7102865507395 520717.52147642587 0.0054404598155886556 0.009421202179401508 5.808263575347862e-08 7.235953683850347 0.06939214241484404 KGVNLPGAAVDLPAVSEK ddPTM_A549_PD325901_60min_R1 2 KGVNLPGAAVDLPAVSEK 18 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 135.18 8.809999999999999e-13 21336000.0 8091.0 7087.4 7526.5 7481.9 10089.5 8430.0 9076.8 8650.5 8988.6 9039.3 8205.0 False True 8912.392363720612 7684.680071232467 8037.293550521229 7944.039970372234 9380.848326885414 8361.348874957592 9422.222591015547 8477.958991314028 8610.8404006985 8468.557055343408 7195.8370157803865 1.2385483918237503 1.0679341478107485 1.1169365749801639 1.1039771958357376 1.3036493609170585 1.1619702970788877 1.309399110951613 1.1781755163050474 1.196641944754311 1.1768689364103109 1.0 12.81294679487735 -10.621657603534349 0.857479228087112 0.9977828757679513 1.1845747140435674 0.02994083385108548 0.08876700938788121 0.447465325349986 0.5762330329229568 0.05296323607944209 0.013708888087691454 2.389694568450489e-11 10.621657603534349 0.18679183827561607 KGVNLPGAAVDLPAVSEKDIQDLK ddPTM_A549_PD325901_60min_R1 2 KGVNLPGAAVDLPAVSEKDIQDLK 24 2 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 211.35 2.0122999999999996e-74 31581000.0 6435.1 6572.4 7236.4 7104.1 7626.7 8076.8 6311.6 8688.7 8246.4 8555.599999999999 9007.3 False True 7088.386614729759 7126.279213839802 7727.505620008207 7542.9041224182865 7091.026902686652 8011.025218654501 6551.791391840045 8515.397062346716 7899.8324856284735 8015.397955892168 7899.459201979123 0.8973255552676114 0.9021224151717109 0.978232233679005 0.9548633557761137 0.8976597918133526 1.0141232474050157 0.8293974592841199 1.0779721553866974 1.0000472543296708 1.0146767963411976 1.0 12.947538174239327 -8.27483292495124 24.997413770266302 1.0058691731575713 0.9295451197301102 0.4508329988554224 0.05076327064630252 605.4893659201912 1130069.7934396882 0.007606777467274214 0.009221704847296789 5.3108871716436414e-09 8.27483292495124 -0.07632405342746107 KGVSASAVPFTPSS(ph)PLLSCSQEGSR ddPTM_A549_MK2206_60min_R1 1 KGVSASAVPFTPSSPLLSCSQEGSR 25 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 KGVSAS(0.001)AVPFT(0.021)PS(0.19)S(0.774)PLLS(0.013)CS(0.001)QEGSR 79.408 1.7124000000000001e-06 4287700.0 780.9 1081.6 987.7 1073.9 1576.6 891.3 837.08 1003.6 1657.9 1314.9 1605.5 True False 912.6968288280193 1136.6488201128757 1127.7707119335928 1337.0055482092034 1344.6842285093903 985.6167744029428 989.1666006609752 1145.863373396098 1282.3882971222763 1017.863176762289 1206.81004045418 0.7562887266702953 0.9418622500730113 0.9345055759638519 1.1078840110627723 1.1142468022583918 0.8167124413648469 0.8196539368272946 0.9494977129663714 1.062626473210028 0.8434328043701217 1.0 10.236982889286516 -5.153831968258886 1.5731919909723278 1.0033940287036995 0.6174855413319587 0.15035274192851455 0.10766100842361538 1.2899059421765577 2.4153430922457932 0.014811959786461798 0.8231459482935417 7.017267491630028e-06 5.153831968258886 -0.3859084873717409 KGVSASAVPFTPSS(ph)PLLSCSQEGSR ddPTM_A549_PD325901_60min_R1 2 KGVSASAVPFTPSSPLLSCSQEGSR 25 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 KGVSASAVPFT(0.002)PS(0.171)S(0.775)PLLS(0.05)CS(0.003)QEGSR;KGVSASAVPFTPS(0.21)S(0.783)PLLS(0.006)CSQEGSR 101.86 3.9919e-12 15379800.0 2587.0 2747.9 3405.2 2531.4 3489.9 4114.4 3173.0 4034.4 3137.5 3334.7 3964.2000000000003 True False 2849.630335551256 2979.4751767558873 3636.2973491310527 2687.758828773478 3244.781463501403 4080.8936905249707 3293.7502513322215 3953.9307270744284 3005.641785950154 3124.146472896536 3476.628531134259 0.81965338258947 0.857001301713366 1.0459263382805817 0.773093473951498 0.9333126718725928 1.1738078008562993 0.9473978084905226 1.137288810600783 0.8645277339910559 0.8986138279999892 1.0 11.763473211687343 -5.593815090831777 7.904744461673046 0.9592561687229715 0.8288266202089769 0.1762790432208663 0.11083120526429659 0.29615436959099545 28.278280281820596 0.015132165469245774 0.059291294635663634 2.547914845071637e-06 5.593815090831777 -0.13042954851399458 KGWDAEGS(ph)PFR ddPTM_A549_PD325901_60min_R1 2 KGWDAEGSPFR 11 1 Q8IVD9 Q8IVD9 NUDCD3 NudC domain-containing protein 3 1 KGWDAEGS(1)PFR;KGWDAEGS(1)PFR 56.147 0.0065661 5663400.0 2860.3999999999996 2510.3 2102.34 2635.3999999999996 2776.2 2565.5 2489.8 2337.1 3110.1000000000004 3052.8 3362.9 True False 3150.7857022848143 2721.8517908986155 2245.0174347974216 2798.1826725723395 2581.2092893700637 2544.607418588815 2584.5507014708387 2290.4847070805176 2979.3933126640854 2860.0456870058924 2949.2846191795074 1.068322020124787 0.9228854255700273 0.7612074535627513 0.9487665769439354 0.8751984371342761 0.862788013757969 0.8763313939465979 0.776623826735899 1.0102088124315904 0.9697421769356254 1.0 11.526149340315351 -8.804590433176097 24.9926164870522 1.0048209073801548 0.884118175636527 0.2639820117094983 0.07871319128196998 110.14781120704077 63795.933525295535 0.013034524659774348 0.013876353139395996 1.5682293111589749e-09 8.804590433176097 -0.12070273174362789 KGYNVNDEK ddPTM_A549_MK2206_60min_R1 1 KGYNVNDEK 9 1 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 0 46.461999999999996 0.036832 3067200.0 2272.4 2608.0 1610.0 2322.6 2785.8 2265.1 1976.5 1972.4 3089.1 2716.2 2672.5 False True 2655.9255651540407 2740.7360603313423 1838.322209388563 2891.637104265478 2376.012510326945 2504.7913785483092 2335.6044657696034 2251.9937402216665 2389.4237822790396 2102.608533517172 2008.844492752286 1.3221160596235098 1.364334606396687 0.9151142440447975 1.4394529366002302 1.1827757294799899 1.2468816713216733 1.1626606609900545 1.1210393578729658 1.1894518420414555 1.0466756093381928 1.0 10.972150172168599 -14.999999980571129 0.13059963034760702 0.245702844031904 1.311035566696779 0.2927476591832293 0.12682581904802845 61.95801622852773 0.5530818109869252 12.154545795260349 0.3462354674145744 1.0000000447366296e-15 14.999999980571129 1.065332722664875 KGYNVNDEK ddPTM_A549_PD325901_60min_R1 2 KGYNVNDEK 9 1 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 0 ; 71.03 0.0033216 6068800.0 7024.1 6729.9 5565.3 8051.5 7505.9 6761.5 5978.7 6459.5 7072.9 7454.4 7433.2 False True 7737.18146113088 7297.0522915861 5942.994724867573 8548.822868716776 6978.7114779492695 6706.436585768183 6206.222700170169 6330.660205120282 6775.650609672299 6983.727911824132 6518.963522937082 1.18687294903668 1.11935774236369 0.9116471819418909 1.311377619868189 1.0705247012649413 1.0287581088882418 0.9520259897656231 0.9711145311437543 1.039375444552199 1.0712942152923188 1.0 12.670426887280103 -7.1476340097976205 4.064772976392193 1.0101744765699034 1.1225925052882106 0.26622572252518184 0.09298586248550701 0.2474854418349696 7.081255602522068 0.01278629445729636 0.02270640446579962 7.118131226715173e-08 7.1476340097976205 0.1124180287183072 KHCFDPVPPAGNS(ph)SPTEAPK ddPTM_A549_MK2206_60min_R1 1 KHCFDPVPPAGNSSPTEAPK 20 1 P52746 P52746 ZNF142 Zinc finger protein 142 1 KHCFDPVPPAGNS(0.471)S(0.471)PT(0.058)EAPK 47.397 0.0039027999999999997 4572300.0 1153.5 1434.1 1640.0 931.55 1676.2 1259.8 1067.6 1151.0 1553.6 1776.7 1762.6 True False 1348.1825996326288 1507.0895644636423 1872.5766604951814 1159.779791818868 1429.633200448714 1393.1111998124395 1261.5691007617638 1314.1577747896656 1201.7120805894008 1375.3422360282607 1324.8977747147537 1.0175748086850611 1.1375138468989534 1.4133744476235846 0.8753730393037794 1.079051703258019 1.0514858024517189 0.9522010866335523 0.9918937142698422 0.9070224914885419 1.038074229028249 1.0 10.371665334450004 -6.287180556683994 24.99392254997145 0.9687688066143835 1.1842904051597094 0.41867389569199787 0.1047027691355086 458.6436781433669 445328.65311796736 0.01406601246108487 0.03269693386364495 5.162017152731584e-07 6.287180556683994 0.21552159854532593 KHDS(ph)GAADLER ddPTM_A549_MK2206_60min_R1 2 KHDSGAADLER 11 1 J3QT56;Q9NX55-3;Q9NX55 J3QT56 HYPK Huntingtin-interacting protein K 1 KHDS(1)GAADLER;KHDS(1)GAADLER 105.53 7.2681e-05 35808000.0 6170.2 6347.4 6076.3 3493.2 7074.3 5585.0 5026.0 5555.1 7632.7 8926.9 9436.9 True False 7211.578913093407 6670.455548062565 6938.0107086383405 4349.034156815706 6033.679841268542 6176.000992977047 5939.1591424022345 6342.552436780258 5903.905636917299 6910.307089998688 7093.457284809746 1.0166521942038915 0.9403673385539353 0.9780859220081178 0.6131050039772463 0.8505978959215473 0.8706616174601655 0.8372728422740519 0.8941412039461336 0.8323029800377021 0.9741804049200008 1.0 12.792273239622931 -10.834809405205712 0.9828292678303832 1.0032814762847362 0.8649846220548605 0.16760324959369433 0.09926736540407134 0.7771243822510224 1.279632803422166 0.0779853494345948 0.017414564301737094 1.462819007429345e-11 10.834809405205712 -0.1382968542298757 KHDS(ph)GAADLER ddPTM_A549_PD325901_60min_R1 1 KHDSGAADLER 11 1 J3QT56;Q9NX55-3;Q9NX55 J3QT56 HYPK Huntingtin-interacting protein K 1 KHDS(1)GAADLER 71.601 0.0010145 37105000.0 4750.9 4706.7 5145.5 4730.7 5387.7 4596.6 4993.7 4908.3 5415.1 5095.6 6370.8 True False 5233.207870572268 5103.350127165086 5494.704572405097 5022.904594800778 5009.2865385559735 4559.166813597874 5183.737986157492 4810.400106013137 5187.522178517506 4773.862946379463 5587.2319878286 0.9366369397176367 0.9133950654424915 0.9834394892452886 0.8989969641036617 0.8965596111756876 0.8159974068608044 0.9277828444299266 0.8609630164797636 0.9284601372948477 0.8544236138357947 1.0 12.447918008433799 -9.971402215259245 0.8722456334994733 0.9928071800344216 0.9054166552409569 0.0 0.05811740113328202 0.38700569150949593 0.5985513779111978 0.016954541309242704 0.008398189120676365 1.0680652485680977e-10 9.971402215259245 -0.08739052479346465 KHEAFESDLAAHQDR ddPTM_A549_MK2206_60min_R1 2 KHEAFESDLAAHQDR 15 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;A0A494C060;O43707;O43707-2 P12814-4;O43707 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 0 ; 46.318999999999996 0.0058731 21117100.0 721.46 678.9000000000001 899.35 7894.5 612.71 535.5 460.92999999999995 761.13 782.89 1078.74 989.8699999999999 False True 843.2248099964946 713.4531101836462 1026.8913534245992 9828.652854397573 522.581170652029 592.1662545638691 544.6750146254404 869.0225083628658 605.5666650184321 835.0518847825325 744.057959977813 1.1332783940939746 0.9588676535426361 1.380122797765943 13.209525847543722 0.7023393320966713 0.7958603850989335 0.7320330457074635 1.1679500188248495 0.813870286444472 1.1222941352679472 1.0 9.539271197284984 -6.9063920443442255 21.594436529147508 0.894171173103429 4.143292313742754 0.19889754357803857 3.151659442898583 7.7840400425956 1788.1957091601348 0.4406138649599186 0.8326831006845263 1.2405319546109792e-07 6.9063920443442255 3.2491211406393252 KHEAFESDLAAHQDR ddPTM_A549_PD325901_60min_R1 1 KHEAFESDLAAHQDR 15 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;A0A494C060;O43707;O43707-2 P12814-4;O43707 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 0 34.302 0.032551 3468600.0 357.88 333.56 301.29 516.91 514.87 463.73 631.84 1079.6 269.69 419.49 493.25 False True 394.21171414266854 361.67027182892184 321.73735120395133 548.8383567122138 478.7073074050738 459.9535366291916 655.8850169561148 1058.0665310701843 258.35586717223805 393.0033298093887 432.58337696936934 0.9112964924923183 0.8360706654119334 0.7437580090525141 1.2687458324388556 1.1066243709105132 1.0632714087433839 1.5162048563936315 2.445925080346082 0.5972394708790021 0.9085030787884776 1.0 8.756834417199833 -6.230355097905823 24.20730591551155 1.0372259635585168 0.8309446457098589 0.015598970558759251 0.4765956653705123 1730.0766438161286 1347316.6007691345 0.07506046665684647 0.19856595551058906 5.88362388156829e-07 6.230355097905823 -0.20628131784865789 KHEAIETDIAAYEER ddPTM_A549_PD325901_60min_R1 1 KHEAIETDIAAYEER 15 1 A0A087WUZ3;Q01082;Q01082-2;F8W6C1;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 45.14 0.014728999999999999 1982700.0 1289.3 1514.5 1319.9 1326.3 1659.9 1409.8 1215.6 1367.2 1519.9 1657.6 1329.1 False True 1420.188786867505 1642.1322301382122 1409.4763512034758 1408.222538754153 1543.31435034413 1398.3190562176999 1261.8603232018434 1339.9301234523484 1456.023888594626 1552.938853112214 1165.6291258590754 1.2183882123062237 1.4087947818976736 1.2091979515051012 1.2081222985195097 1.324018348637864 1.199626043306983 1.0825573033548257 1.1495338386168175 1.249131354298931 1.3322752654860859 1.0 10.186893116600165 -14.999999999999913 0.1740518532515094 0.06390639229685362 1.2909300460647808 0.0 0.12318416984084095 29.301525027711712 0.318994835744624 9.40995492295698 0.09880614620975639 1.0000000000002004e-15 14.999999999999913 1.227023653767927 KHEEEEAKAER ddPTM_A549_MK2206_60min_R1 2 KHEEEEAKAER 11 2 P25789;H0YN18;P25789-2 P25789 PSMA4 Proteasome subunit alpha type-4 0 ; 107.09 4.2951e-05 35989000.0 3882.4 4312.9 4445.6 2159.0 5427.200000000001 4341.9 3652.8 3920.6000000000004 6454.1 5813.6 7048.599999999999 False True 4537.65420443322 4532.408188114665 5076.052927986208 2687.955096921192 4628.866069368368 4801.356976080037 4316.466477390946 4476.357056333942 4992.25665507985 4500.3037222794455 5298.238088536485 0.8564458841989567 0.8554557406397412 0.9580643306628656 0.5073299938590863 0.873661393092847 0.906217670071958 0.8146984724469545 0.8448765384891247 0.9422484553650636 0.8493962798720791 1.0 12.371296960652186 -8.854198750010903 0.9014856212404762 0.9867580653651638 0.8165621068687292 0.09070520979381491 0.11674008839684358 0.454930106660487 0.7551046696359978 0.025837122899504177 0.025636858508956722 1.3989469636302808e-09 8.854198750010903 -0.17019595849643454 KHEEEEAKAER ddPTM_A549_PD325901_60min_R1 2 KHEEEEAKAER 11 2 P25789;H0YN18;P25789-2 P25789 PSMA4 Proteasome subunit alpha type-4 0 ; 132.79 2.1277e-08 41520000.0 3606.8999999999996 3987.0 4428.299999999999 4361.6 4688.0 5213.7 4514.9 4487.4 5170.6 4929.0 5652.9 False True 3973.069832740561 4322.998482377715 4728.8310675311395 4631.006126087696 4358.73105272202 5171.241355796728 4686.716990148078 4397.895286702804 4953.297663245854 4617.782098811595 4957.629136685552 0.801405212693416 0.8719890825209804 0.9538492971446072 0.9341170947659426 0.8791966749727615 1.0430875753755933 0.945354495250003 0.8870964659617598 0.9991263014396042 0.9314496852216816 1.0 12.275434637031365 -2.5222006008281297 0.27600042213141096 1.0001894925883057 3.8998196654008736e-12 0.40301666954715387 0.05082047944965624 18.26456067116506 0.2944654790530913 0.01802070424891746 8.436519549402743 0.003004688115178574 2.5222006008281297 -1.000189492584406 KHES(ph)PLLVTK ddPTM_A549_MK2206_60min_R1 1 KHESPLLVTK 10 1 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 KHES(1)PLLVTK 43.99100000000001 0.025702999999999997 1624600.0 1427.2 1504.3 1741.5 1369.5 1855.9 1588.2 1375.6 1258.6 2178.6 2140.5 1756.5 True False 1668.0764683100897 1580.862444615198 1988.470886739243 1705.0275614791908 1582.8995684958647 1756.2622698381624 1625.5287139451889 1437.0104043008462 1685.1505785093136 1656.959563358186 1320.3125730661893 1.263395125016708 1.1973395367613051 1.5060607066108413 1.2913817502468903 1.1988824470707449 1.3301867343121319 1.2311696087012107 1.088386518173986 1.2763269947478069 1.2549752211403957 1.0 10.366663800783117 -14.458824420255208 0.2007353217593708 3.440241761907417e-10 1.3195528766276083 0.05061693287454572 0.12035296214350703 21.661872524860524 0.30939072878147905 8.598373769655042 0.08202384721080999 3.4767669430651885e-15 14.458824420255208 1.3195528762835842 KHFGAGGNQR ddPTM_A549_MK2206_60min_R1 2 KHFGAGGNQR 10 1 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 0 ; 51.927 0.007606900000000001 3958700.0 1152.5500000000002 1240.35 967.2900000000001 996.79 1283.6100000000001 1240.46 1152.3899999999999 994.16 1604.38 1989.48 1270.0900000000001 False True 1347.0722628578992 1303.4785170368025 1104.4662670307225 1241.0035947476035 1094.7926693878853 1371.724653849294 1361.7643462222275 1135.0852244873108 1240.9904916683975 1540.0550862461312 954.6916002992518 1.4110025294405588 1.365339882144372 1.1568827741697143 1.2998999827364208 1.146750080386921 1.436824890277993 1.426391879634614 1.18895486681931 1.2998862578024193 1.6131440621907587 1.0 9.898890955829074 -10.654206359254013 0.6072701954187886 0.9623476380347573 1.3069791000338693 0.0 0.20741219474421255 0.6315391177992318 0.3462032453346322 0.11804160559909932 0.021236643022577363 2.217142672530442e-11 10.654206359254013 0.344631461999112 KHFGAGGNQR ddPTM_A549_PD325901_60min_R1 1 KHFGAGGNQR 10 1 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 0 42.743 0.023505 1962000.0 571.98 404.63 321.33 171.73 512.85 452.52 237.23 222.66 399.07 458.47 294.7 False True 630.0469885305791 438.72959014910873 343.13738611426095 182.33737207287237 476.8291852364522 448.8348271525276 246.25791746723704 218.2188716266091 382.2984757033073 429.5221259570204 258.45376825721866 2.4377550878017886 1.6975167091101406 1.3276548004235844 0.7054931847285212 1.8449302885067695 1.7366155277172732 0.952812253919842 0.844324588873601 1.4791754760674867 1.6618915206898857 1.0 8.013762426712912 -5.37492970098879 2.042922675064317 1.2313805372157707 2.6220665731885138 0.465707123262147 0.3621628894210175 0.3447438937975459 1.8537113017892592 0.04934054470052059 0.8092925022073915 4.217647687367638e-06 5.37492970098879 1.390686035972743 KHGGPKDEER ddPTM_A549_MK2206_60min_R1 5 KHGGPKDEER 10 2 P00441;H7BYH4 P00441 SOD1 Superoxide dismutase [Cu-Zn] 0 ;;;; 112.15 4.1961999999999996e-05 71932400.0 8635.32 7663.25 5519.659999999999 3090.5099999999998 5431.75 5062.5 4463.79 4717.53 5331.59 9842.58 10523.76 False True 10092.750902695818 8053.276692612792 6302.430786505383 3847.685088738267 4632.746770395718 5598.210389784471 5274.802862766348 5386.254324329706 4123.993377799721 7619.134342031312 7910.419950999731 1.2758805430323938 1.0180593119578951 0.796725183434651 0.4864071835088845 0.5856511789630365 0.7077007825705841 0.6668170458004206 0.6809062423606199 0.5213368447371147 0.9631769728064051 1.0 12.949538571666395 -5.565276384911084 2.2976534590531545 0.7198916293967559 1.275105419686136 0.5726251631832657 0.1529560886073029 0.25022396839707967 2.263688174336109 0.027067975892558514 0.21428123266687985 2.720969132811254e-06 5.565276384911084 0.5552137902893801 KHGGPKDEER ddPTM_A549_PD325901_60min_R1 4 KHGGPKDEER 10 2 P00441;H7BYH4 P00441 SOD1 Superoxide dismutase [Cu-Zn] 0 ;;; 99.522 0.00013966 80408200.0 3839.17 4028.71 3438.58 3014.7200000000003 3447.98 2995.36 3051.42 3671.9300000000003 3034.3999999999996 3559.0 5002.87 False True 4228.919712152423 4368.223530458974 3671.9427166612977 3200.932407474116 3205.805779685253 2970.9667812684424 3167.5434579010935 3598.6904755766404 2906.874720410244 3334.2841326172597 4387.548705805879 0.9638456449626307 0.9955954505254079 0.8369007304243378 0.7295491451156866 0.7306598728905574 0.6771359090184169 0.7219392125971392 0.8202052482778432 0.6625281940605436 0.7599423633075859 1.0 12.099199425403407 -5.833339594823534 4.705297701651709 0.8015705363410884 0.9802223955262458 0.40512401801976183 0.09227821926156111 0.230997466857348 9.502555878303863 0.018633207149694336 0.06331814949265929 1.4677781056113586e-06 5.833339594823534 0.17865185918515736 KHGLAHDEMKS(ph)PR ddPTM_A549_MK2206_60min_R1 6 KHGLAHDEMKSPR 13 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR 125.52 6.5507e-07 68614800.0 7271.09 6370.8 5190.74 1966.4899999999998 8435.09 7689.539999999999 6251.449999999999 5624.46 9019.92 9253.43 8907.52 True False 8498.272230917046 6695.04650811308 5926.864984572414 2448.2801382790913 7194.2994348961565 8503.242018896457 7387.257544920501 6421.744429186342 6976.92252185244 7163.07373621376 6695.536948954476 1.2692443183730127 0.9999267510813343 0.8851963673350959 0.36565852103338714 1.074491783070447 1.2699865722082615 1.1033106980425278 0.9591082056815641 1.0420258412496555 1.069828124439264 1.0 12.708984041859367 KHGLAHDEMKS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KHGLAHDEMKSPR 13 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR 53.967 0.0040718 13480700.0 867.9200000000001 1004.56 770.34 736.25 896.5500000000001 879.09 729.23 729.4100000000001 818.85 1139.7 1110.7 True False 956.0305994710657 1089.2177967036264 822.6199048307342 781.7264903549313 833.5794209295914 871.9309825013603 756.9812466999672 714.861345338925 784.4365821275802 1067.7391474975807 974.0909413074066 0.981459285708888 1.1181890216961659 0.84450010768669 0.8025190022871095 0.8557511271080878 0.8951227709099429 0.777115579869741 0.733875365250242 0.8053011776033192 1.0961390792367713 1.0 9.927912658641441 -5.769660244349437 24.99131907428545 0.8714409411516549 1.049824162911845 0.320188103701044 0.10217778619833937 137.98240134463126 419470.0714891288 0.01379643466380106 0.043968377745431636 1.6995727359601187e-06 5.769660244349437 0.17838322176019006 KHIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 KHIKEEPLSEEEPCTSTAIASPEK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 KHIKEEPLS(0.999)EEEPCT(0.007)S(0.046)T(0.037)AIAS(0.911)PEK 79.515 6.3795000000000005e-06 5721800.0 783.97 551.59 688.4 739.06 871.77 773.23 592.68 903.24 1356.6 863.09 1077.8 True False 916.2849697737254 579.6635749686214 786.0254713932213 920.1297331776643 743.5337878267355 855.0526853714665 700.362284225817 1031.2770360564887 1049.3322660450442 668.1173695579622 810.15251423327 1.1310030564317872 0.7154993223926686 0.9702191347725649 1.1357487843489285 0.9177701417496894 1.0554218747079864 0.86448202273203 1.2729418448234915 1.2952280559644185 0.824680980210584 1.0 9.66204971606313 -8.258386340115447 24.936969361291688 1.1533232631051888 0.9678881656646017 0.08851512990309729 0.16660115326811104 283.34319953024465 2314322.882065743 0.024797140105445103 0.03131569263768175 5.5158654006508295e-09 8.258386340115447 -0.18543509744058717 KHIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 KHIKEEPLSEEEPCTSTAIASPEK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 KHIKEEPLS(0.999)EEEPCT(0.001)ST(0.001)AIAS(0.999)PEK;KHIKEEPLS(1)EEEPCTS(0.001)TAIAS(0.999)PEK 115.13 3.2696999999999997e-16 21529000.0 2865.2 3169.8 2666.7 3018.0 3154.5 2810.3 2669.5 2891.9 3145.9 2907.9 3151.0 True False 3156.0729947512405 3436.930170414068 2847.6782981697934 3204.4150056246935 2932.938802434216 2787.4138485519948 2771.0892833064513 2834.2187858483376 3013.688763161939 2724.2946977346814 2763.446975834734 1.142078361680129 1.2437112781496016 1.0304805277870823 1.159571735461564 1.0613334824520326 1.008672818015631 1.002765498140021 1.0256099757413388 1.0905542206944703 0.9858320863608298 1.0 11.432253215493814 -6.1860360909459144 0.9232173788272262 1.037281819724139 1.192482146119593 0.5124630326949964 0.054759398695916485 0.5208870682680836 0.6808942835053085 0.008615505161692738 0.05847343245619091 6.515742443791494e-07 6.1860360909459144 0.155200326395454 KHIKEEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_A549_PD325901_60min_R1 1 KHIKEEPLSEEEPCTSTAIASPEKK 25 3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 KHIKEEPLS(1)EEEPCT(0.001)S(0.02)T(0.075)AIAS(0.904)PEKK 90.24600000000001 7.5329e-09 23980000.0 3090.4 3034.4 3813.8 3085.3 3365.4 3419.1 3255.7 2982.1 2902.6 3380.4 3358.7 True False 3404.1351329677645 3290.1195372277252 4072.6274022424536 3275.8719737753077 3129.0259139997197 3391.25598319899 3379.5974450873973 2922.6196760878065 2780.613816063399 3166.9609670973273 2945.601192553515 1.1556673529238868 1.116960281502178 1.3826133057448724 1.1121233865795268 1.0622707248727026 1.1512950197644174 1.14733707116599 0.9921980217404156 0.943988555916122 1.0751492683746227 1.0 11.524346400550911 -8.263553984760746 3.782160775080826 0.9731805857633397 1.1634950770922383 0.44719681019138524 0.08271302592513463 0.12650708579784642 4.0886198977322215 0.0128913221533229 0.016254334180555646 5.450621377982726e-09 8.263553984760746 0.19031449132889866 KHIKEEPLS(ph)EEEPCTSTAIASPEK ddPTM_A549_MK2206_60min_R1 2 KHIKEEPLSEEEPCTSTAIASPEK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 KHIKEEPLS(1)EEEPCTSTAIASPEK;KHIKEEPLS(1)EEEPCTSTAIASPEK 138.02 7.8053e-24 15283800.0 1858.07 2000.31 1975.75 1304.48 1897.6599999999999 2147.63 1884.69 2060.38 2623.3999999999996 2780.7 2455.1000000000004 True False 2171.6667905499758 2102.1172349851936 2255.941059130095 1624.0776585603332 1618.5167278150013 2374.8907811185845 2227.1137771774916 2352.445174649117 2029.2040887089559 2152.5379387199764 1845.4309126870478 1.1767803257331972 1.1390928918191776 1.2224467703563726 0.8800533508976437 0.8770400000823401 1.2869031101579491 1.20682587566212 1.2747403105022386 1.0995827992034253 1.1664148053019032 1.0 10.849742013148092 -10.0011111904732 1.1442981679067492 1.014611851971214 1.1261376116528357 0.0 0.1392529234371165 0.7684779791547305 2.0258344674960966 0.04561019712583405 0.02590416888163133 9.974446598352157e-11 10.0011111904732 0.1115257596816217 KHLEINPDHPIVETLR ddPTM_A549_MK2206_60min_R1 2 KHLEINPDHPIVETLR 16 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 164.41 1.5835999999999998e-21 20870400.0 1548.74 1966.63 2241.3 1034.8600000000001 2243.66 1990.05 1971.63 2020.45 2580.2 2660.8 2640.0 False True 1810.1294489423822 2066.7230668441066 2559.1500421755186 1288.4007464566305 1913.6205861584301 2200.635770111721 2329.849649807903 2306.85497486862 1995.7888197327306 2059.723431994144 1984.4151397066548 0.9121727670400477 1.0414771715305593 1.2896243285836972 0.6492596839626449 0.9643247261464202 1.1089593735094305 1.1740737122940474 1.1624860790014078 1.0057315023446944 1.0379498678379473 1.0 10.954498153806561 -5.255770592139779 21.949967983093394 1.0253517216568173 0.9121725104513873 0.044799256218861494 0.1550279267812512 317.76525380605483 1230176.5095877363 0.02022792085345579 0.23303846517757412 5.549187609106916e-06 5.255770592139779 -0.11317921120543006 KHLEINPDHPIVETLR ddPTM_A549_PD325901_60min_R1 1 KHLEINPDHPIVETLR 16 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 147.53 3.0515999999999997e-15 20476000.0 1461.3 1633.8 1551.1 1253.1 1799.0 1645.0 1473.7 1625.3 1627.7 1794.7 1782.3 False True 1609.6501002477964 1771.4860598215976 1656.3669735220185 1330.501141003414 1672.6444462130785 1631.603665398011 1529.7824599395822 1592.8821164768149 1559.2934294792237 1681.382335714581 1563.0883989305764 1.02978827131535 1.1333242963312895 1.0596758152995447 0.8512001892623011 1.0700894762941477 1.0438332640139296 0.9786922230286007 1.0190608014022895 0.9975721338256051 1.0756796204648043 1.0 10.61018365550923 -6.015354125204638 24.982962062042436 0.9977151390186083 1.085292249883625 0.20394658628772655 0.06114107072017563 557.5471820597367 907198.2719096603 0.007060487287772791 0.019392568389339657 9.652634788698465e-07 6.015354125204638 0.08757711086501674 KHLEINPDHS(ph)IIETLR ddPTM_A549_MK2206_60min_R1 1 KHLEINPDHSIIETLR 16 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 KHLEINPDHS(0.997)IIET(0.003)LR 45.696000000000005 0.0082731 2125200.0 509.86 605.92 335.71 464.24 780.62 514.13 480.41 521.79 670.88 435.05 620.86 True False 595.9119031198027 636.758739906429 383.31872603343766 577.9788208405258 665.791832081061 568.5348953481268 567.694278472236 595.7553304148563 518.9267511752174 336.77190284465263 466.6833271357095 1.276908491197317 1.3644343024092274 0.8213679464104151 1.2384818296121647 1.4266458503400778 1.2182455688690146 1.2164443112988113 1.2765729902358678 1.1119461977785974 0.7216283146681193 1.0 8.866300115854793 -9.253404231557916 1.1594275351771124 1.0283309317720704 1.2270173846494408 0.32450234079730533 0.17292419332171163 0.4275728968896412 1.1980253708760196 0.035541607122850906 0.030210424665423678 5.579506250514028e-10 9.253404231557916 0.1986864528773704 KHLEINPDHS(ph)IIETLR ddPTM_A549_PD325901_60min_R1 1 KHLEINPDHSIIETLR 16 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 KHLEINPDHS(0.999)IIET(0.001)LR 67.251 0.00050613 3813800.0 708.28 573.77 614.29 739.5 793.76 584.26 858.78 733.88 745.22 802.11 787.41 True False 780.1840641918218 622.1236115459901 655.9794134258527 785.1772354736456 738.0090359233421 579.5019802707853 891.4613428424477 719.2421876822776 713.900994972358 751.4646377110513 690.5635618032458 1.1297787884355683 0.9008926128703625 0.9499189498399183 1.1370093629373352 1.0687054410982872 0.8391725430133484 1.2909185948279753 1.0415293065914806 1.0337947648268206 1.08819039879367 1.0 9.431630400895271 KHLEINPDHSIIETLR ddPTM_A549_MK2206_60min_R1 2 KHLEINPDHSIIETLR 16 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 168.41 1.2568e-28 16421300.0 811.2 732.71 782.99 613.54 1094.76 991.29 977.56 799.66 1234.47 1442.5500000000002 1098.33 False True 948.1107280641423 770.0018093425527 894.0297557323918 763.8573275428571 933.7222542198025 1096.1876498349527 1155.169998258402 913.0142538560416 954.8645160435102 1116.6769531055136 825.5843486340949 1.1484117033380825 0.9326749115538565 1.0829054078018046 0.9252323264202339 1.1309834734205155 1.3277718402105891 1.399214992592334 1.1059006331292458 1.1565923186689593 1.3525897807450236 1.0 9.68927181029121 -5.989613437266321 24.041177209775373 1.1113444987879126 1.0323550301054834 0.0013246053835391791 0.15398134690926604 392.4716555523086 908405.6592890867 0.020770488123892223 0.06446763420415819 1.0242042242926301e-06 5.989613437266321 -0.07898946868242929 KHLEINPDHSIIETLR ddPTM_A549_PD325901_60min_R1 2 KHLEINPDHSIIETLR 16 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 187.89 5.405199999999999e-35 24514000.0 1328.38 1237.62 1517.56 1254.72 1436.29 1476.61 1442.24 1504.55 1845.96 1368.98 1616.17 False True 1463.2361596983303 1341.9185808277675 1620.5507474296146 1332.2212047241285 1335.4099453315066 1464.584977728485 1497.1252324240108 1474.5405699533578 1768.3807206988176 1282.5423691684123 1417.391335745739 1.0323445069801211 0.9467523520042807 1.1433333240865242 0.9399106450888529 0.9421603700074128 1.0332961270416654 1.0562539749379243 1.040320010971106 1.247630542180795 0.904861160657245 1.0 10.469022419907228 -8.541590888466075 24.980234366622874 1.1183597380183454 1.0137207196670703 0.0 0.10031483666407966 301.2942902406832 402218.3483147284 0.017091604963536133 0.019381398197400045 2.8734861720185323e-09 8.541590888466075 -0.10463901835127509 KHLFS(ph)STENLAAGSWKEPAEGGGLSSDR ddPTM_A549_MK2206_60min_R1 1 KHLFSSTENLAAGSWKEPAEGGGLSSDR 28 2 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 KHLFS(0.489)S(0.489)T(0.022)ENLAAGSWKEPAEGGGLSSDR 69.482 5.4062e-05 3228700.0 1188.3 1911.8 1490.9 1454.3 2433.3 1553.3 1573.7 1182.3 2798.1 2421.8 2840.4 True False 1388.855988854315 2009.1024540419714 1702.332038495284 1810.6035652860078 2075.3647933730185 1717.6691750029083 1859.6209196972543 1349.8946456418957 2164.3348176475292 1874.7136979868517 2135.050288948023 0.6505027052728715 0.9410094293525477 0.7973264364344566 0.8480379008674892 0.9720449228367297 0.8045099377257452 0.870996308294697 0.6322542624075673 1.013716083808937 0.8780653587839171 1.0 11.060054336129154 -8.873112047164815 21.8911943055411 1.0064923466506774 0.825896833303289 0.25503471208376627 0.10585617916756701 2.3399641702904557 447.0568673271805 0.01574625280606037 0.016763042550365804 1.3393310979265178e-09 8.873112047164815 -0.18059551334738844 KHLFSS(ph)TENLAAGSWKEPAEGGGLSSDR ddPTM_A549_PD325901_60min_R1 1 KHLFSSTENLAAGSWKEPAEGGGLSSDR 28 2 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 KHLFS(0.163)S(0.673)T(0.163)ENLAAGS(0.001)WKEPAEGGGLSSDR 52.777 0.0015125 4392700.0 2194.2 1901.6 2486.0 2480.7 2803.6 2613.5 2072.5 2621.6 2861.8 2235.3 2875.4 True False 2416.9535687153325 2061.8545056657795 2654.7149095324194 2633.927204921531 2606.684807894934 2592.216522503165 2151.370121615515 2569.310131394585 2741.528498177576 2094.162776521316 2521.7440286623905 0.9584452431507721 0.8176303709776006 1.0527297296468907 1.0444863455545272 1.033683347027731 1.0279459346546584 0.8531278738693661 1.0188623834106687 1.0871557410336232 0.830442246603484 1.0 11.300206126021642 -5.773081524968541 24.99999239079957 1.0273236071062828 0.8880377976960121 0.09280794824252425 0.08759399311757023 142.85477921338753 306764.4111267849 0.009326705144848782 0.029340499652042953 1.6862364584425618e-06 5.773081524968541 -0.1392858094102707 KHNGVGGS(ph)PPK ddPTM_A549_MK2206_60min_R1 8 KHNGVGGSPPK 11 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK 92.939 0.0001195 127084800.0 20099.100000000002 20039.9 19337.199999999997 10956.6 26957.0 20116.3 18539.7 18830.8 27919.3 30841.0 29103.600000000002 True False 23491.33670418393 21059.845312666446 22079.50573129722 13640.96749186047 22991.66100972198 22244.993513880763 21908.123508236105 21500.12356690638 21595.623127960655 23873.99667999524 21876.372901502506 1.0738222835180555 0.9626753670495359 1.0092854894506194 0.6235479507173507 1.0509813995784865 1.016850170457322 1.0014513652183823 0.9828011098416464 0.9871665300822071 1.0913142131690183 1.0 14.417085938941822 KHNGVGGS(ph)PPK ddPTM_A549_PD325901_60min_R1 5 KHNGVGGSPPK 11 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK 91.07600000000001 0.00012431 207196200.0 22273.21 21021.76 21367.2 20241.46 25614.43 22431.8 22354.4 21616.0 25272.2 24552.6 27121.3 True False 24534.36988252941 22793.337491073133 22817.306683411563 21491.729012508964 23815.360801786348 22249.122858039587 23205.108924797067 21184.851922576057 24210.097320442866 23002.34464582706 23785.55203608586 1.0314820461306717 0.9582849898330127 0.9592927104989895 0.9035623381750039 1.0012532299294656 0.9354049392793026 0.975596819850631 0.8906605106509955 1.0178488724463033 0.9670721373600843 1.0 14.537797888578275 KHNGVGGS(ph)PPKSK ddPTM_A549_MK2206_60min_R1 1 KHNGVGGSPPKSK 13 2 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 KHNGVGGS(0.999)PPKS(0.001)K 62.055 0.0018547999999999998 1847800.0 784.19 786.63 862.34 317.61 767.74 1008.5 923.81 568.22 891.1 1119.8 1104.3 True False 916.5421003952415 826.6661070316125 984.632778909399 395.42446425805474 654.8064630190285 1115.2188006118804 1091.6543190096713 648.7669251007676 689.2672727942937 866.8364022651238 830.0718328704771 1.1041720295769355 0.9958970709473572 1.1862018923162754 0.4763737891100758 0.7888551774545074 1.3435208333179245 1.315132348527734 0.7815792554449923 0.8303706323954323 1.0442908287437134 1.0 9.697092379778601 KHPDAS(ph)VNFSEFSK ddPTM_A549_MK2206_60min_R1 4 KHPDASVNFSEFSK 14 1 Q5T7C4;P09429 Q5T7C4 HMGB1 High mobility group protein B1 1 KHPDAS(0.996)VNFS(0.004)EFSK;KHPDAS(1)VNFSEFSK;KHPDAS(1)VNFSEFSK;KHPDAS(0.918)VNFS(0.082)EFSK 80.638 0.00020983 10798200.0 6496.700000000001 8427.5 7598.1 7977.200000000001 10457.4 9029.400000000001 8081.4 8522.6 11869.599999999999 10721.6 11296.9 True False 7593.184130934809 8856.423753237108 8675.62483177344 9931.614358110117 8919.130312834015 9984.885114769368 9549.685772664036 9730.70464936786 9181.1545518563 8299.583113525412 8491.567951421255 0.8942028344322345 1.0429668353245394 1.0216752526041295 1.1695854540559658 1.050351403163558 1.1758588251181776 1.1246080614671028 1.1459255469702987 1.0812083945367978 0.9773911203450112 1.0 13.051815253856539 -5.068383649246017 1.722029017861419 1.070091862056019 0.7597867613696707 0.40411578936390435 0.06464887697036743 1.4353475453948175 2.764184803857755 0.009732329560370432 0.8514841850346311 8.543116932823593e-06 5.068383649246017 -0.3103051006863482 KHPDAS(ph)VNFSEFSK ddPTM_A549_PD325901_60min_R1 2 KHPDASVNFSEFSK 14 1 Q5T7C4;P09429 Q5T7C4 HMGB1 High mobility group protein B1 1 KHPDAS(1)VNFSEFSK;KHPDAS(0.977)VNFS(0.022)EFSK 73.464 0.00021827 7034300.0 4650.7 5246.0 4729.0 5872.2 6161.5 5377.0 5170.1 5860.200000000001 6467.5 5432.5 5973.6 True False 5122.835640335611 5688.098830838602 5049.938377787134 6234.912457266179 5728.737496021055 5333.211494738667 5366.850984687277 5743.313713762036 6195.69346633709 5089.4910228837525 5238.885069770349 0.9778484490708964 1.0857460614397376 0.9639337970833749 1.1901220153202352 1.0935031823998727 1.0180050571280146 1.0244261733580151 1.0962854953437258 1.182635882220009 0.9714836181941389 1.0 12.355044097291104 -6.227314835862428 24.98769501996405 1.0854766633229957 1.0168331195705091 0.1074760885406304 0.07275064874454287 1027.6779497011555 752515.9829154139 0.010995059306581375 0.029087589212356532 5.924956472145232e-07 6.227314835862428 -0.0686435437524866 KHPKTDSSVTK ddPTM_A549_MK2206_60min_R1 1 KHPKTDSSVTK 11 2 D6RH05;A0A2R8YFM9;Q9ULG3 D6RH05 KIAA1257 Uncharacterized protein KIAA1257 0 39.266 0.033417 6902500.0 1254.7 1416.8 583.96 646.48 1831.0 1568.9 572.78 579.97 1820.5 2027.8 724.36 False True 1466.462685530177 1488.9090683579172 666.7743089407113 804.8676290215898 1561.662325511033 1734.919956648466 676.8467118155893 662.1825235836341 1408.159656741121 1569.718571631736 544.4814206810274 2.693319973518935 2.734545223775711 1.2246043365570163 1.4782279035616606 2.8681645804511278 3.1863712713621335 1.2431034119933821 1.2161710178381997 2.586240050174385 2.882960762312809 1.0 9.088739010528366 -10.959415921370658 1.080199185187701 0.9630955753182645 2.1516554072086733 0.0 0.8942944282126968 0.6397328281482613 1.2559021930293481 0.6052976384494198 0.12339953699669241 1.0979538315831417e-11 10.959415921370658 1.1885598318904087 KHPKTDSSVTK ddPTM_A549_PD325901_60min_R1 2 KHPKTDSSVTK 11 2 D6RH05;A0A2R8YFM9;Q9ULG3 D6RH05 KIAA1257 Uncharacterized protein KIAA1257 0 ; 43.628 0.019257 72033000.0 6338.5 6565.1 915.25 716.62 8283.8 6713.0 943.3100000000001 1177.54 7157.4 8015.2 1104.79 False True 6981.979853842921 7118.364017220457 977.3643688453533 760.883989837896 7701.9744655585855 6658.3315536880555 979.208178249039 1154.0530409377402 6856.59936852896 7509.118904117411 968.9078338408306 7.206030965985462 7.3467916850281565 1.0087279044602213 0.7853006893562715 7.949130140714544 6.871996820681984 1.0106308815435798 1.1910865003154931 7.07662703205612 7.750085861470068 1.0 9.92021562736063 -11.099748863483859 1.4333970233747828 0.9985979698267744 4.695870493395013 0.0 3.467937092672091 0.6163824138901604 2.2622026301853824 2.169277440261558 0.47210816626390717 7.947876983424992e-12 11.099748863483859 3.6972725235682384 KHPS(ph)SPAR ddPTM_A549_MK2206_60min_R1 2 KHPSSPAR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KHPS(0.588)S(0.412)PAR;KHPS(0.5)S(0.5)PAR 50.284 0.013225 30241000.0 1284.63 1112.0900000000001 747.75 390.25 1934.1100000000001 1770.0 1669.8 1691.3 1871.92 1504.0 1607.94 True False 1501.444137811932 1168.6906308795567 853.792193832483 485.8612675189881 1649.604981100024 1957.3002251690905 1973.1810457587053 1931.0469543890194 1447.9331088419874 1164.2453554266356 1208.6441211136057 1.2422549463348647 0.9669435448068558 0.7064049532180129 0.40198869049338626 1.3648392874985658 1.6194181487977597 1.632557517377969 1.5976968908017481 1.1979813441759088 0.9632656421262674 1.0 10.239173797830812 -6.7941598975500215 24.998811542842777 1.2318629593761714 0.8304366640036251 0.3730792713031281 0.2979484420072947 208.20589371821242 159070.8943455272 0.04919092619971451 0.09296668174073786 1.6063497219550247e-07 6.7941598975500215 -0.40142629537254626 KHPS(ph)SPAR ddPTM_A549_PD325901_60min_R1 3 KHPSSPAR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KHPS(0.609)S(0.391)PAR;KHPS(0.605)S(0.395)PAR;KHPS(0.5)S(0.5)PAR 63.283 0.0041677 67450200.0 3449.2200000000003 2853.8599999999997 1916.7199999999998 2065.54 2585.2200000000003 1694.8600000000001 1540.39 1579.15 1869.68 2343.08 3319.0 True False 3799.3822752184396 3094.364797822542 2046.800145373686 2193.1237146183007 2403.643065724834 1681.0576220890423 1599.0103843837503 1547.6526144307898 1791.103851587341 2195.137528927466 2910.7840408744805 1.3052779669896086 1.0630691780531094 0.7031782903271554 0.7534477597174902 0.8257716931149288 0.5775274285151041 0.5493400959774959 0.5316961315913468 0.6153338160563927 0.7541396057221702 1.0 11.507192090554575 -5.554360397647525 2.9344550032507604 0.7520926466241477 1.290041266748819 0.6439110868275391 0.13888923980256804 0.18322147857749763 2.951641184234404 0.026300961565346042 0.16767730501296618 2.7902274204701362e-06 5.554360397647525 0.5379486201246714 KHPSS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 KHPSSPAR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KHPS(0.041)S(0.959)PAR 73.84100000000001 0.0021483 16246000.0 1672.0 1400.5 968.18 681.27 1699.5 1710.9 2005.0 2187.1 2327.8 1536.2 1910.1 True False 1954.1927235247128 1471.7794679808449 1105.482482413552 848.181180583372 1449.5058013140358 1891.9463023964954 2369.2825468596275 2497.128122712838 1800.5570167327555 1189.1713530627649 1435.769453921848 1.3610769599442138 1.0250806380931383 0.769958212576464 0.5907502616569389 1.0095672375217808 1.3177229096416465 1.6501831407457932 1.7392263889525275 1.2540711266801778 0.828246728480333 1.0 10.487608394278375 -7.103451827417044 5.44674789328039 1.2300779345234856 0.9165818667673199 0.2325535285960233 0.30098117461747975 0.31698592710436224 13.746488487486088 0.047567561861089146 0.0835250226986797 7.88039837141919e-08 7.103451827417044 -0.3134960677561657 KHS(ph)DPHLLER ddPTM_A549_MK2206_60min_R1 2 KHSDPHLLER 10 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 KHS(1)DPHLLER;KHS(1)DPHLLER 88.101 0.00015662 247700000.0 7438.099999999999 7053.2 5751.8 3289.5 10377.0 9492.5 9063.3 8533.3 11763.9 12010.3 14013.5 True False 8693.469435914565 7412.177753347015 6567.4917291684105 4095.427647671265 8850.557046328773 10496.990049388462 10709.98429274457 9742.921407135238 9099.395433088088 9297.16488848439 10533.56119707546 0.825311523165425 0.7036725391033882 0.623482562667582 0.3887980115222875 0.8402245812922265 0.9965281307050124 1.0167486657521003 0.924940884175075 0.86384796773331 0.8826231427853343 1.0 13.362705646186534 -6.987944423148641 24.74651836128636 0.94284718168209 0.6362481479324567 0.6545518242298745 0.10595174844753433 98.23239706350108 201640.35179330007 0.01581685467930785 0.029875747062082136 1.0281478622316088e-07 6.987944423148641 -0.3065990337496334 KHS(ph)DPHLLER ddPTM_A549_PD325901_60min_R1 2 KHSDPHLLER 10 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 KHS(1)DPHLLER;KHS(1)DPHLLER 82.705 0.00022654 395790000.0 13937.2 13609.9 13618.2 11522.3 12102.599999999999 10818.2 11234.2 12316.7 14944.2 13733.0 17192.5 True False 15352.094283975634 14756.854036948205 14542.412944889149 12234.006301958061 11252.555127703396 10730.100165962785 11661.723628590125 12071.03375623577 14316.147243855394 12865.896036311551 15077.931492236967 1.0181830506313032 0.9787054706108679 0.9644832882001397 0.811384924268748 0.7462930265664686 0.711642719128104 0.7734299386221702 0.800576243661186 0.9494768729534429 0.8532931750575796 1.0 13.880150901618755 -8.904150918335628 4.74272211141298 0.9783926481508339 0.8468923174004305 0.08012216944222783 0.10184397839818317 0.22896560934847227 8.562253175397245 0.0189467865873008 0.01994488506652247 1.2469501208973986e-09 8.904150918335628 -0.13150033075040346 KHS(ph)EEAEFTPPLK ddPTM_A549_MK2206_60min_R1 4 KHSEEAEFTPPLK 13 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 KHS(0.999)EEAEFT(0.001)PPLK;KHS(0.996)EEAEFT(0.004)PPLK;KHS(1)EEAEFTPPLK;KHS(1)EEAEFTPPLK 110.22 2.3225e-05 44460800.0 11597.0 9687.64 8691.59 6191.139999999999 10652.2 7782.969999999999 7305.92 8330.08 10397.99 11096.4 11791.0 True False 13554.29008057182 10180.699496743995 9924.18815645934 7707.969577930838 9085.275490884014 8606.558719482637 8633.311094639741 9510.894349800086 8042.861867178025 8589.715533215498 8862.96928495499 1.5293170544526664 1.1486781877971606 1.1197362686685357 0.8696825330327185 1.0250825878756449 0.9710694511931104 0.9740878950460657 1.0731047399594351 0.9074680965927403 0.9691690512565192 1.0 13.11357439823036 -4.823184615734576 1.0386177931514269 0.966348805291059 2.384409069531908 0.8738610538306166 0.06050335034734213 0.9119008161098241 0.41420452941749647 0.008975209048638723 1.7804145627848929 1.5025031260962695e-05 4.823184615734576 1.4180602642408489 KHS(ph)EEAEFTPPLK ddPTM_A549_PD325901_60min_R1 3 KHSEEAEFTPPLK 13 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 KHS(0.999)EEAEFT(0.001)PPLK;KHS(1)EEAEFTPPLK;KHS(0.942)EEAEFT(0.058)PPLK 109.38 2.6698e-05 29270700.0 5591.9 4798.76 5964.299999999999 5220.82 5980.73 3989.94 4756.21 5405.46 5941.49 7544.4 8768.900000000001 True False 6159.585571460794 5203.168346449684 6369.0732642494795 5543.2981940574955 5560.664157198414 3957.4472515003913 4937.2101742479745 5297.643859798667 5691.789837388042 7068.045296464639 7690.380890637002 0.8009467488092894 0.6765813579902802 0.82818697211783 0.7208093165848822 0.7230674574218414 0.514597041132067 0.6419981330520315 0.6888662518976817 0.7401180667550245 0.9190761025985003 1.0 12.908839338691166 -10.262289421358624 0.7359729271165546 0.9965483596300748 0.6981041742326767 0.5918002027090928 0.08119960141978065 0.3211792200568133 0.3272370195276001 0.05123578525912038 0.01713039107017566 5.4665154343086767e-11 10.262289421358624 -0.29844418539739814 KHS(ph)PDLR ddPTM_A549_MK2206_60min_R1 1 KHSPDLR 7 1 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 KHS(1)PDLR 84.213 0.005921899999999999 36203000.0 2929.4 3229.1 3644.3 2150.3 3665.5 3418.4 3055.8 3218.3 4228.6 4367.1 4471.8 True False 3423.8111030462255 3393.4473973987483 4161.116538928409 2677.123596530635 3126.3098056584877 3780.1328190497256 3610.999305084115 3674.5038806303937 3270.828851686626 3380.5690769173266 3361.3286445985673 1.0185886192794815 1.009555374138079 1.2379380235892874 0.7964480357588942 0.9300815648247489 1.1245948310124774 1.0742773726950954 1.0931700732491834 0.9730761843066525 1.0057240556794937 1.0 11.71481588971599 -8.825698626815084 24.999859882895525 0.9872859321041026 1.034230249280801 0.030249535763735125 0.10603803651196873 175.37667790867394 68228.04789739013 0.018203407484734053 0.01937900301689685 1.4938306749648856e-09 8.825698626815084 0.04694431717669845 KHS(ph)PDLR ddPTM_A549_PD325901_60min_R1 1 KHSPDLR 7 1 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 KHS(1)PDLR 61.78 0.011617 45330000.0 7586.4 7104.4 7724.1 8620.2 8884.2 9659.4 8671.5 9467.0 8312.3 8754.3 10432.0 True False 8356.565743187497 7703.112720893967 8248.303874786552 9152.650176105364 8260.204440826143 9580.737048963863 9001.498677726875 9278.173258282173 7962.962937801897 8201.552003981817 9148.930133896523 0.9133926722455405 0.8419686901263084 0.9015593904501275 1.0004066095329616 0.9028601508522097 1.0471975311591362 0.9838853883446526 1.0141265833812423 0.8703709418765095 0.8964492988743352 1.0 13.159387330707352 -6.0395200501429 8.244341510706056 0.9545624572989881 0.8761441263604671 0.28565629138273696 0.05464782589108038 0.33507857908671235 65.7518144655665 0.008575114197955444 0.023161581519231922 9.130192828126998e-07 6.0395200501429 -0.07841833093852102 KHS(ph)PS(ph)PPPPTPTESR ddPTM_A549_MK2206_60min_R1 4 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 2 KHS(1)PS(1)PPPPTPTESR;KHS(0.98)PS(0.976)PPPPT(0.02)PT(0.018)ES(0.006)R;KHS(0.999)PS(0.997)PPPPT(0.003)PTESR;KHS(0.958)PS(0.966)PPPPT(0.064)PT(0.009)ES(0.002)R 72.421 0.00040119 110911000.0 8855.33 9659.67 8147.77 6306.15 12318.68 9421.85 8384.35 8356.49 12170.4 12261.5 14473.099999999999 True False 10349.893211967754 10151.305943213527 9303.24630309929 7851.157033093828 10506.61849045672 10418.863913282137 9907.677866215721 9541.048048177314 9413.8238321352 9491.618634018414 10879.029832760743 0.951361782353095 0.9331076483166014 0.8551540391114479 0.7216780497697616 0.9657679638691167 0.9577015665410827 0.9107133649344424 0.8770127662896671 0.8653183212887907 0.8724692164585921 1.0 13.409262285597986 -10.825909002777395 0.9755369809306395 1.0026706461727721 0.8906188528250492 0.0 0.07498431033867049 0.6514088814623921 1.057269876057362 0.05261192672582766 0.011809539093588594 1.493107225843215e-11 10.825909002777395 -0.11205179334772297 KHS(ph)PS(ph)PPPPTPTESR ddPTM_A549_PD325901_60min_R1 4 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 2 KHS(0.992)PS(0.938)PPPPT(0.061)PT(0.005)ES(0.003)R;KHS(1)PS(1)PPPPTPTESR;KHS(0.998)PS(0.955)PPPPT(0.016)PT(0.026)ES(0.005)R;KHS(0.99)PS(0.995)PPPPT(0.014)PTESR 100.28 2.7064e-06 262828000.0 17275.0 18580.4 20243.7 17355.7 21252.699999999997 18516.899999999998 18764.4 20991.699999999997 20468.5 21536.5 23034.300000000003 True False 19028.74528281716 20146.235515919463 21617.55921725723 18427.722171345442 19759.983669834724 18366.10450565862 19478.489510273677 20573.004075829915 19608.280126126123 20176.68171455792 20201.227126458274 0.941959870244443 0.9972778084125995 1.070111190866417 0.9122080582525599 0.9781575914244518 0.9091578640588557 0.9642230834958535 1.0184036814716424 0.9706479712039103 0.9987849544115958 1.0 14.302155311906922 -10.898366593737702 0.6003452856190429 1.0051323277114428 0.9735731444448745 0.05112401872729311 0.04357743635132155 3.9914959531563285 1.8496002122175186 0.07108717094937068 0.009147782504107093 1.26366921718288e-11 10.898366593737702 -0.03155918326656826 KHS(ph)PSPPPPTPTESR ddPTM_A549_MK2206_60min_R1 1 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 KHS(0.853)PS(0.146)PPPPTPTESR 53.278 0.0075565 4771400.0 514.59 639.49 541.91 537.99 644.7 486.67 286.14 432.01 1035.7 807.74 870.59 True False 601.4402114824051 672.0373095173661 618.7609866395997 669.7975741512886 549.8654840289255 538.1690963745996 338.1279341438473 493.24874047513794 801.1156036730453 625.2709730002063 654.3984759383397 0.9190733682868103 1.0269542705669266 0.9455416071260869 1.023531684102516 0.840260948408346 0.8223874537649568 0.51670036923452 0.7537437182564801 1.224201511967656 0.9554896534617265 1.0 9.354025578092957 -8.759376280321892 24.998523204366492 1.1058729375893115 0.8573318838412379 0.25677865072204364 0.14896184474873625 47.673032096710834 577652.1023894141 0.028379550196783794 0.031407840490587986 1.740298395084941e-09 8.759376280321892 -0.24854105374807356 KHS(ph)PSPPPPTPTESR ddPTM_A549_PD325901_60min_R1 2 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 KHS(0.652)PS(0.346)PPPPT(0.001)PTESR;KHS(0.5)PS(0.5)PPPPTPTESR 65.47 0.00082004 20283500.0 1646.52 1892.3799999999999 1628.67 1771.45 2287.56 2003.3000000000002 2052.66 2285.5 1859.88 1865.43 2246.66 True False 1813.6734982960406 2051.857503908186 1739.2013401883219 1880.8684432451505 2126.88967725358 1986.985788991998 2130.775099558651 2239.9139095599357 1781.7157115069222 1747.6464314437249 1970.3350627511459 0.920489886508764 1.0413749126725744 0.8826931891268809 0.9545931952400651 1.079455833407258 1.0084507079814147 1.081427793597443 1.1368187837211714 0.9042704183618102 0.8869793084854894 1.0 10.9442252708238 -4.012978556941304 12.247046256810453 0.9820234558789626 0.5594667243337563 0.0 0.08386366714313347 0.0 0.0 0.010988040422261359 0.0 9.705578868411255e-05 4.012978556941304 -0.42255673154520623 KHS(ph)QTDLVSR ddPTM_A549_MK2206_60min_R1 4 KHSQTDLVSR 10 1 E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;E9PPM1;O14683 E9PN66 TP53I11 Tumor protein p53-inducible protein 11 1 KHS(0.993)QT(0.007)DLVSR;KHS(0.904)QT(0.096)DLVSR;KHS(0.997)QT(0.003)DLVSR;KHS(0.957)QT(0.043)DLVSR 127.79 6.4085e-07 293606000.0 9986.18 12825.2 10426.54 6251.09 15061.499999999998 11894.4 9920.45 11245.240000000002 17388.300000000003 18897.3 19829.100000000002 True False 11671.603045339722 13477.9478991417 11905.180154706977 7782.607330622093 12845.97330184841 13153.057513136278 11722.867352615252 12839.287207103163 13449.877813409294 14628.386805255152 14904.987214680772 0.7830669612278295 0.9042575954621752 0.7987380319911235 0.5221478702750284 0.8618573848353038 0.8824601674385256 0.7865063675511732 0.8614088037899836 0.902374327444021 0.9814424255826815 1.0 13.863507517352563 -8.950874560462893 0.5320958124359901 0.9904510383029922 0.77548642819069 0.4052478584323719 0.09445880223185778 0.5470117462721454 0.36046979109691957 0.03885476351311785 0.03257165872396453 1.1197612632407908e-09 8.950874560462893 -0.21496461011230217 KHS(ph)QTDLVSR ddPTM_A549_PD325901_60min_R1 3 KHSQTDLVSR 10 1 E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;E9PPM1;O14683 E9PN66 TP53I11 Tumor protein p53-inducible protein 11 1 KHS(0.914)QT(0.086)DLVSR;KHS(0.998)QT(0.002)DLVSR;KHS(0.901)QT(0.099)DLVSR 172.09 6.690600000000001e-11 452552000.0 16414.35 17596.39 18230.29 16335.81 20076.78 19628.059999999998 16489.629999999997 20440.98 21354.53 22129.85 25081.3 True False 18080.722728394183 19079.299539836084 19467.50710703934 17344.835882383686 18666.656233930964 19468.215587022547 17117.15189312176 20033.268618261412 20457.07336647844 20732.567494296178 21996.459103460413 0.8219833311966916 0.8673804929282727 0.8850291319831914 0.7885285445626589 0.8486209596795689 0.8850613408027963 0.7781776063416018 0.9107497040334934 0.9300166572382642 0.9425411334060851 1.0 14.424983683071071 -9.001751964035265 0.8506250213226796 0.9839318507853929 0.8409678467351704 0.6268964555106058 0.03907287633419849 0.19412460403915927 0.2939438559073027 0.009684083241073345 0.008797109018692226 9.959740795632606e-10 9.001751964035265 -0.14296400405022247 KHS(ph)SGEQDTSTLPSPPLLTTVEDVNQDNK ddPTM_A549_PD325901_60min_R1 1 KHSSGEQDTSTLPSPPLLTTVEDVNQDNK 29 1 O15063 O15063 KIAA0355 Uncharacterized protein KIAA0355 1 KHS(0.387)S(0.387)GEQDT(0.074)S(0.074)T(0.074)LPS(0.001)PPLLT(0.002)T(0.002)VEDVNQDNK 69.873 6.2368e-05 2868700.0 1067.2 1218.6 1485.9 1005.7 1202.3 1658.5 1283.1 1481.0 1277.1 1367.9 1311.4 True False 1175.5413583688837 1321.295698677072 1586.7421094425683 1067.819804889581 1117.8545957098302 1644.9937258739217 1331.9290726392617 1451.4602931779752 1223.4279282348807 1281.5305605527253 1150.106113649531 1.022115563440178 1.1488467742200936 1.3796484434010168 0.9284532898457187 0.9719577893231436 1.4302973493932722 1.1580923332480757 1.2620229350596037 1.063752217047768 1.1142715835899322 1.0 10.16755126111294 -8.946326379662366 6.73895935131273 1.0276942226781358 1.1643658074518604 0.0797608938272637 0.15018858213642378 0.28969501620121924 27.09650402977599 0.025689571526570455 0.027035107283411186 1.1315496648709668e-09 8.946326379662366 0.13667158477372454 KHS(ph)VNEK ddPTM_A549_PD325901_60min_R1 1 KHSVNEK 7 1 E9PNQ0;E9PR18;Q96PZ2 E9PNQ0 FAM111A Protein FAM111A 1 KHS(1)VNEK 44.309 0.033949 2932900.0 1199.9 1197.4 1108.0 1020.8 1302.5 770.8 651.51 1004.7 874.36 1256.6 1811.6 True False 1321.7129646803073 1298.3091002756657 1183.1955429452628 1083.8524975949933 1211.0168933810644 764.5228603579251 676.3035695699517 984.6604703280971 837.6136898688047 1177.2580615473018 1588.7846846785803 0.8319018791068576 0.8171712081541878 0.7447173643825938 0.6821896686486895 0.7622284536472981 0.4811997923510901 0.4256735202018715 0.619757025494804 0.5272040308207392 0.7409802428863842 1.0 10.633707905639024 -10.883229129261531 1.1373876894689599 0.9996038741366441 0.6440344772528331 0.1729956345866006 0.14715136860353054 0.35610818876682176 0.8194006656082465 0.09916229009063471 0.023954498343106673 1.3084913943774456e-11 10.883229129261531 -0.35556939688381095 KHSPS(ph)PPPPTPTESR ddPTM_A549_PD325901_60min_R1 1 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 KHS(0.175)PS(0.823)PPPPT(0.001)PT(0.001)ESR 47.68 0.011894 8093600.0 871.88 845.51 525.08 618.29 848.08 813.43 530.7 741.47 946.52 634.25 1031.2 True False 960.3926157558675 916.7640950176027 560.7150863625438 656.4803690615283 788.5137865171696 806.8056957718571 550.896078910183 726.6807991780375 906.7410560119649 594.2033467582175 904.3689373153848 1.0619478136951372 1.0137058640459422 0.6200070161929977 0.7258988472230011 0.8718939295481215 0.8921200878115698 0.6091497133299553 0.803522510774404 1.0026229546357726 0.6570364397102222 1.0 9.820767629950563 -8.763912654753893 24.27902842182463 1.001238636844351 0.8175837475980223 0.0 0.16955736633944 43.852452589763715 430478.695333682 0.023546564288936218 0.025648070520582406 1.722214911781989e-09 8.763912654753893 -0.18365488924632878 KHSQT(ph)DLVSR ddPTM_A549_PD325901_60min_R1 1 KHSQTDLVSR 10 1 E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;E9PPM1;O14683 E9PN66 TP53I11 Tumor protein p53-inducible protein 11 1 KHS(0.417)QT(0.583)DLVSR 144.28 1.6583e-08 31935000.0 1696.2 1329.4 1426.2 1281.6 1767.1 1715.7 1639.4 1481.2 1648.1 1918.0 2156.6 True False 1868.3969753235576 1441.433203529705 1522.9905084373052 1360.761521275218 1642.984992164052 1701.7279080385217 1701.7882641141032 1451.6563040210794 1578.8360884221352 1796.8971526720725 1891.3518718137702 0.9878632332606627 0.7621179459046921 0.8052391155416186 0.7194650247551629 0.8686828805622832 0.8997415728923023 0.8997734844982181 0.7675231275864965 0.8347659216410438 0.9500596792435468 1.0 10.885202075499299 -10.621307586743107 0.6804491812788005 1.013499866286137 0.8326546091872744 0.32722556136652403 0.07365552151988206 0.6749717080677415 0.4963336157099905 0.06983774864753749 0.014464236668378675 2.3916213034408466e-11 10.621307586743107 -0.18084525709886257 KIAELEEEQSQGS(ph)TTNSDWMK ddPTM_A549_MK2206_60min_R1 3 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQS(0.002)QGS(0.767)T(0.117)T(0.111)NS(0.004)DWMK;KIAELEEEQS(0.002)QGS(0.93)T(0.044)T(0.024)NS(0.001)DWMK;KIAELEEEQS(0.123)QGS(0.775)T(0.077)T(0.023)NS(0.003)DWMK 109.06 1.2398000000000002e-10 14281700.0 2985.24 3361.95 3015.89 2520.33 4228.6 2743.05 3261.3500000000004 3025.55 5322.7 4508.6 5223.0 True False 3489.0755298892987 3533.0588949505195 3443.5885515980594 3137.8109631419147 3606.5785415925493 3033.3177303107755 3853.8950794018156 3454.430977858275 4117.116948605309 3490.1041286413083 3925.9849525332775 0.8887134240384545 0.8999165655667583 0.8771272924456963 0.7992417192320652 0.9186429864600911 0.7726259185872578 0.9816377612234746 0.8798890010083386 1.048683833071928 0.8889754216682076 1.0 11.938838927933002 -8.503997240530708 1.683433670236219 1.0228713450673608 0.8679957725409049 0.20690113165673463 0.06918739532371493 0.16732817752052775 0.9247435642754325 0.009699884079226628 0.011469174365932991 3.133305633003279e-09 8.503997240530708 -0.1548755725264559 KIAELEEEQSQGS(ph)TTNSDWMK ddPTM_A549_PD325901_60min_R1 1 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQS(0.003)QGS(0.629)T(0.321)T(0.046)NS(0.001)DWMK 99.711 3.7871999999999997e-08 9090000.0 1836.5 1262.3 1292.0 1858.9 1446.6 1551.2 1695.7 1908.5 1910.8 2143.6 2198.5 True False 2022.940128040156 1368.6784510422356 1379.6828894271464 1973.720031131791 1344.9958064990758 1538.5675414987218 1760.2307914226435 1870.4334703107145 1830.4957209859936 2008.2527301709347 1928.0984374397533 1.0491892367935007 0.709859219044672 0.7155666239007866 1.023661444253135 0.697576316842538 0.7979714684804815 0.9129361640684618 0.9700923116738739 0.949378768968164 1.0415716807683404 1.0 10.912962993688922 -7.980863345867568 3.3125413076336265 0.9745601611700139 0.8243826759554579 0.2974783665448325 0.11204513040938416 0.22646835966309506 5.212512481534521 0.01657557393004113 0.022821078192950164 1.0450490002774536e-08 7.980863345867568 -0.15017748521455598 KIAELEEEQSQGST(ph)TNSDWMK ddPTM_A549_PD325901_60min_R1 1 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQS(0.006)QGS(0.386)T(0.534)T(0.074)NSDWMK 135.72 2.7024e-18 23294000.0 3378.1 3515.9 3301.6 3515.9 2871.9 3982.0 2816.3 3049.4 4282.9 3870.1 4854.5 True False 3721.042225174217 3812.1972320521245 3525.6664301336455 3733.069157811753 2670.1876515171425 3949.5719122278906 2923.4758376384934 2988.5773247919765 4102.904607185948 3625.741225524601 4257.427275210954 0.8740119289506457 0.8954227484398384 0.8281213517520274 0.876836858622977 0.6271833853896743 0.927689812865257 0.6866766355964674 0.701967909632442 0.9637051538320526 0.8516272836028531 1.0 12.055766170857481 -8.87099772487475 7.265848651492861 0.9839837587234826 0.8034162156590481 0.24275615802195794 0.09897530693080404 0.145022107854083 8.853392880698348 0.01540085166512671 0.016353561548972672 1.3458674045919857e-09 8.87099772487475 -0.18056754306443457 KIAELEEEQSQGSTT(ph)NSDWMK ddPTM_A549_PD325901_60min_R1 1 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQS(0.006)QGS(0.003)T(0.138)T(0.427)NS(0.427)DWMK 111.4 1.4234e-10 8290800.0 2258.0 1713.6 2129.7 1910.0 2265.1 2162.6 1825.0 2019.5 2705.1 2604.9 2400.0 True False 2487.2304977482563 1858.0110858797227 2274.2342489264665 2027.9763620752715 2106.0071901707865 2144.9885026077445 1894.451373678318 1979.219488232897 2591.4140542386467 2440.426169444986 2104.8152148534955 1.1816859172226093 0.882743089639367 1.0804911675273896 0.9634937773938639 1.000566308770898 1.0190863727469992 0.9000559100434763 0.9403293335518099 1.2311836383314156 1.1594491298918375 1.0 11.039477866972156 -8.737287708677345 24.999035477963226 1.1091700931967021 0.9917264082964363 0.27861240695504297 0.09431260890013787 271.1831402141143 280697.48752198473 0.01803177514468031 0.02044122214611023 1.8311009642214856e-09 8.737287708677345 -0.1174436849002658 KIAELEEEQSQGSTTNS(ph)DWMK ddPTM_A549_MK2206_60min_R1 3 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQSQGS(0.002)T(0.037)T(0.037)NS(0.925)DWMK;KIAELEEEQSQGS(0.003)T(0.005)T(0.079)NS(0.913)DWMK;KIAELEEEQSQGS(0.008)T(0.064)T(0.044)NS(0.884)DWMK 137.32 2.4465e-18 31286200.0 4240.9 4262.4 3646.41 3377.16 5689.799999999999 4496.099999999999 4041.2700000000004 4718.29 5822.7 6820.4 7026.200000000001 True False 4956.660239949731 4479.337953817605 4163.525768656242 4204.564351606473 4852.837957232483 4971.874317730366 4775.516447953818 5387.1220566571055 4503.867746941234 5279.666903026477 5281.400626745037 0.938512449680333 0.8481344761338909 0.7883374246543858 0.7961078222914089 0.9188543532671408 0.9413931396442019 0.9042140116715595 1.0200176879929719 0.852779038222101 0.9996717303152917 1.0 12.366704867521165 -6.88039671521929 6.359511200420843 0.9345971753388038 0.8396385626573134 0.41727485011714327 0.058693695989484554 0.20242233438360122 10.549504113163279 0.00962466943528939 0.018342590696429458 1.3170530996762938e-07 6.88039671521929 -0.09495861268149042 KIAELEEEQSQGSTTNS(ph)DWMK ddPTM_A549_PD325901_60min_R1 2 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQSQGST(0.002)T(0.028)NS(0.97)DWMK;KIAELEEEQSQGS(0.046)T(0.106)T(0.388)NS(0.459)DWMK 128.92 5.5613000000000006e-18 25693000.0 4432.299999999999 3700.1 4238.2 4496.0 4110.5 4577.299999999999 4022.4 3524.8 4510.9 5707.799999999999 5931.6 True False 4882.263833113192 4011.9204125020774 4525.829738366976 4773.707708843152 3821.792660455173 4540.023986398979 4175.474633141739 3454.4950988478936 4321.322560077307 5347.408533900756 5202.050803510416 0.9385267498384623 0.7712189988215374 0.8700087541076845 0.9176588021058519 0.7346703838178925 0.8727373410761979 0.8026593339542304 0.6640640834412368 0.8306959549801433 1.0279423896230022 1.0 12.344864773449842 -10.382510672508374 0.9368077285003987 0.9916314764232976 0.821321923797483 0.46608033638491464 0.07745661637059396 0.3790151392223804 0.6380471460211113 0.03831582641647925 0.014033956492359414 4.1446639866684543e-11 10.382510672508374 -0.1703095526258146 KIDAGTMAEPS(ph)ASPSK ddPTM_A549_PD325901_60min_R1 3 KIDAGTMAEPSASPSK 16 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGTMAEPS(0.612)AS(0.385)PS(0.003)K;KIDAGTMAEPS(0.753)AS(0.245)PS(0.002)K;KIDAGTMAEPS(0.496)AS(0.496)PS(0.008)K 131.98 1.0329000000000001e-10 78689000.0 11475.4 11123.8 12166.2 11976.3 15792.199999999999 13695.900000000001 13482.3 13385.600000000002 13274.3 12713.7 13435.5 True False 12640.374160257008 12061.241664979492 12991.871493303839 12716.04885084925 14683.010352132389 13584.36513126117 13995.376304297644 13118.61370719994 12716.427333621714 11910.954812266387 11783.018674651725 1.072761955936612 1.0236121997265688 1.1025927949390986 1.0791843076854926 1.2461161912370795 1.1528764832126253 1.1877581365805068 1.1133491399297721 1.079216428721953 1.0108576707843029 1.0 13.524421568042815 -9.617573118317274 0.9212288359729771 1.0133606777911348 1.122704905841968 0.3681544375039466 0.057385066291394185 0.4050133640330924 0.7218736023189162 0.019794383082172236 0.012892302102399203 2.4122753649529267e-10 9.617573118317274 0.10934422805083321 KIDAGTMAEPSAS(ph)PSK ddPTM_A549_MK2206_60min_R1 4 KIDAGTMAEPSASPSK 16 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGTMAEPS(0.126)AS(0.817)PS(0.057)K;KIDAGTMAEPS(0.063)AS(0.93)PS(0.008)K;KIDAGTMAEPS(0.026)AS(0.972)PS(0.003)K;KIDAGTMAEPS(0.01)AS(0.984)PS(0.006)K 131.65 1.693e-10 46614500.0 10858.0 13065.3 12777.8 11214.499999999998 16978.2 12976.4 12660.5 13345.5 19087.6 17727.1 17616.300000000003 True False 12690.564947387149 13730.26796359168 14589.884178338612 13962.05300343804 14480.729270885546 14349.554034962812 14960.748969833561 15237.26549387965 14764.289076633777 13722.535797994347 13241.686524853922 0.9583798048358608 1.0368972213487093 1.1018146480778108 1.054401414595643 1.0935713697576217 1.0836651364635075 1.1298220163838688 1.1507042902186315 1.114985545755219 1.0363132953070515 1.0 13.692799261973148 -5.3523534227885765 2.98345491095205 1.0737149389795275 0.9500440834190517 0.42399717946255033 0.042004736904572966 0.3196375253380203 4.398821222443365 0.007572420113705302 0.08291225787576813 4.4426957993678736e-06 5.3523534227885765 -0.12367085556047586 KIDAGTMAEPSAS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 KIDAGTMAEPSASPSK 16 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGTMAEPS(0.15)AS(0.848)PS(0.003)K 114.02 8.2082e-08 9078700.0 2226.9 2033.3 2317.5 2064.5 2668.4 2496.7 2296.8 2425.2 2544.8 2453.2 2809.9 True False 2452.9732486428657 2204.653326866971 2474.7794862596065 2192.019476180312 2480.9807894802534 2476.3677029782475 2384.2059808571858 2376.827483467406 2437.8509057803835 2298.3045333342684 2464.300113423683 0.9954036179606871 0.8946367022659503 1.0042524742740706 0.8895099522334201 1.0067689304422407 1.0048969642491308 0.9674982230734789 0.9645040677148897 0.9892670509167193 0.9326398683402263 1.0 11.266962249210463 -7.278819358805426 0.38792856025905925 0.9980164045963795 0.9424947231400751 0.0 0.04288869452159638 2.0150995960464955 0.5453217717025531 0.012446096965572872 0.04289432633158952 5.262361044269689e-08 7.278819358805426 -0.05552168145630443 KIDAGTMAEPSAS(ph)PSKR ddPTM_A549_PD325901_60min_R1 2 KIDAGTMAEPSASPSKR 17 2 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGT(0.008)MAEPS(0.039)AS(0.785)PS(0.168)KR;KIDAGTMAEPS(0.286)AS(0.595)PS(0.119)KR 46.982 0.0051056 9381400.0 2918.1000000000004 3074.8 2711.4 2216.2 3560.5 3597.3999999999996 3061.2 3526.2 3820.1000000000004 4032.3 4059.0 True False 3214.34336380832 3333.92418701154 2895.411908972728 2353.0896406446145 3310.422763058178 3568.10396711417 3177.695641152914 3455.8671747496123 3659.554481755594 3777.699889843375 3559.7687321209755 0.9029640984270221 0.9365563995572058 0.8133707908737061 0.6610231781103939 0.9299544470929064 1.0023415102554227 0.8926691255191695 0.9708122731586957 1.0280315259624084 1.0612205944043314 1.0 11.797567801173969 -6.993337146104761 24.998118827892156 0.9979562765373504 0.8301654994873787 0.5084243995059292 0.07523437890177123 105.456841203613 395655.38877748576 0.011008552028667882 0.02076959524079042 1.0154600774357097e-07 6.993337146104761 -0.1677907770499717 KIDS(ph)EEEENELEAINR ddPTM_A549_MK2206_60min_R1 2 KIDSEEEENELEAINR 16 1 H0Y9Z7;A0A1B0GUA8;Q9H1H9 H0Y9Z7 KIF13A Kinesin-like protein KIF13A 1 KIDS(1)EEEENELEAINR;KIDS(1)EEEENELEAINR 143.95 1.0953e-14 10600000.0 2130.5 1894.31 1763.6999999999998 2069.54 2971.0 2369.8 2375.3 2575.1 3105.1000000000004 3091.7 3338.5 True False 2490.0763142759574 1990.7222877478005 2013.819180558142 2576.577392905181 2533.9698356599024 2620.570663054073 2806.8612636187877 2940.128310913003 2401.7998078257906 2393.2828227210957 2509.458312087374 0.992276421681102 0.7932876502307434 0.8024915858765719 1.0267464418494274 1.0097676552164518 1.044277424506915 1.1185128081621858 1.1716187102018032 0.9570989070657114 0.9537049534528258 1.0 11.293160264453725 -6.270315643251988 24.73613532270637 1.0122272534170822 0.8557454614936988 0.4641256693040706 0.07973677604983057 406.04458472953434 1131555.084527353 0.011935632416925405 0.028135185942840812 5.36641625910133e-07 6.270315643251988 -0.1564817919233834 KIDS(ph)EEEENELEAINR ddPTM_A549_PD325901_60min_R1 1 KIDSEEEENELEAINR 16 1 H0Y9Z7;A0A1B0GUA8;Q9H1H9 H0Y9Z7 KIF13A Kinesin-like protein KIF13A 1 KIDS(1)EEEENELEAINR 111.6 1.5634e-07 10807000.0 2021.3 2059.7 1805.6 2017.7 2036.4 1917.8 1725.0 2277.2 2284.0 2007.9 2832.6 True False 2226.500887997585 2233.278147517779 1928.1388739548431 2142.328746470824 1893.370289198617 1902.1820726445642 1790.645818956219 2231.779459571158 2188.011422823953 1881.120851329643 2484.2081573308387 0.8962618053673297 0.8989899420978185 0.7761583377242167 0.8623789194753521 0.7621624957680485 0.7657096153682896 0.7208115043306923 0.8983866561202732 0.8807681499503912 0.7572315732795983 1.0 11.278570349914062 -9.622975852118316 0.7304759292341876 0.9857911355102307 0.8171164835553034 0.0 0.09011917307946812 0.33617961826992643 0.38456882152772726 0.024599053707371216 0.014153451952735562 2.3824519360845135e-10 9.622975852118316 -0.16867465195492726 KIDS(ph)EEEENELEAINRK ddPTM_A549_PD325901_60min_R1 1 KIDSEEEENELEAINRK 17 2 H0Y9Z7;A0A1B0GUA8;Q9H1H9 H0Y9Z7 KIF13A Kinesin-like protein KIF13A 1 KIDS(1)EEEENELEAINRK 151.3 1.5974e-17 9744700.0 3453.8 2422.3 2961.5 3292.3 4375.1 3544.9 3324.4 3108.8 3246.1 3625.1 3658.7 True False 3804.4272334468224 2626.4357220625893 3162.4851989462027 3495.6578936441965 4067.808069275616 3516.031509707851 3450.911861181484 3046.792545193581 3109.6777056168244 3396.2105673365627 3208.7030944102 1.1856588539071808 0.8185349796427211 0.9855960822475248 1.0894301500609058 1.2677421218441935 1.0957796362751793 1.0754849419359584 0.9495401897736568 0.9691385005468767 1.058437152771478 1.0 11.647774585955526 -8.24958458127708 23.39760251395261 0.9823278397244286 1.0696832110717798 0.10551881958028475 0.10924630701261992 525.484797846791 1037139.2964729429 0.017632071838060648 0.022655676728581778 5.628794827941096e-09 8.24958458127708 0.08735537134735116 KIDS(ph)PPIR ddPTM_A549_MK2206_60min_R1 1 KIDSPPIR 8 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 KIDS(1)PPIR 40.449 0.041291 20836000.0 1458.9 1868.1 1811.5 1613.0 2387.5 1818.2 1777.1 2052.4 2480.4 2456.0 2471.9 True False 1705.1266533194985 1963.1783106997639 2068.397939321356 2008.1850724103215 2036.301912702125 2010.6007171765202 2099.976066845009 2343.333985211389 1918.5933603848807 1901.1878942339195 1858.059009030637 0.9176924118298457 1.0565747918436499 1.1132035792557815 1.080797252751411 1.095929624842474 1.082097343197655 1.1301988024269378 1.2611730702965798 1.0325793481584984 1.023211795208691 1.0 10.859580604834765 -8.978375543371998 24.99844406975904 1.0143731426196128 1.0957985658975378 0.1604126484326971 0.07555421480552232 180.92048739090208 209151.39322605333 0.013446776217351864 0.013784502440885579 1.0510526139364517e-09 8.978375543371998 0.08142542327792501 KIDS(ph)PPIR ddPTM_A549_PD325901_60min_R1 2 KIDSPPIR 8 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 KIDS(1)PPIR;KIDS(1)PPIR 68.132 0.0032131 59098000.0 5084.3 4873.5 5151.1 5065.8 5459.200000000001 4812.4 4955.7 4982.9 4167.6 5084.1 5730.799999999999 True False 5600.454393136163 5284.20694854974 5500.68462208063 5378.702960733457 5075.764625217583 4773.209409946133 5144.291875363092 4883.512150490568 3992.450265219395 4763.089058342069 5025.947930534338 1.1143080808918657 1.051385136015117 1.0944571448227915 1.0701867657752704 1.0099119002766803 0.9497132632328454 1.0235465918995648 0.9716599172907414 0.794367613910981 0.9476996427688172 1.0 12.29518000945228 -7.360056184176933 0.8780062604284489 0.9081970218847455 1.0877951109271573 0.5372614785599064 0.05746255700789792 0.39275292826540825 0.599734755826216 0.014589372475438147 0.033340976489085024 4.3645936434237004e-08 7.360056184176933 0.1795980890424118 KIDS(ph)PPIRR ddPTM_A549_MK2206_60min_R1 3 KIDSPPIRR 9 2 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 KIDS(1)PPIRR;KIDS(1)PPIRR;KIDS(1)PPIRR 65.87899999999999 0.0011547 85872000.0 9436.6 9149.5 8967.2 8127.7 13258.7 11510.000000000002 9314.3 9519.699999999999 15875.5 15585.899999999998 16219.4 True False 11029.267377280674 9615.17046932577 10238.88379877585 10118.986864866314 11308.36279369369 12727.98056028036 11006.587743747945 10869.146627858545 12279.724597964108 12065.034365122341 12191.675347332623 0.9046556000766319 0.7886668727140477 0.8398258243495619 0.8299914963762725 0.9275478940773969 1.0439894598296595 0.9027953443786576 0.8915219867822818 1.0072220796669056 0.989612503728785 1.0 13.573608770414141 -7.064036928641098 0.6153589979870014 0.9994308188684223 0.8184323980299306 0.49679476639912434 0.055527716228818254 0.4843392508073152 0.33028154380698377 0.011508195901867422 0.04140620823572089 8.629051706656805e-08 7.064036928641098 -0.1809984208384917 KIDS(ph)PPIRR ddPTM_A549_PD325901_60min_R1 5 KIDSPPIRR 9 2 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 KIDS(1)PPIRR;KIDS(1)PPIRR;KIDS(1)PPIRR;KIDS(1)PPIRR;KIDS(1)PPIRR 77.124 0.00039808 142548000.0 15265.1 14968.4 14542.8 14786.3 17153.0 16779.1 16785.1 16797.8 16989.199999999997 16791.1 18554.0 True False 16814.801714427318 16229.839599604364 15529.761860960607 15699.616168876217 15948.232454637538 16642.45657269287 17423.866165659154 16462.754701380818 16275.20300553444 15730.907080412951 16271.975623496557 1.0333595688372914 0.9974105157930946 0.954386991493264 0.9648254478826861 0.9801042493947977 1.0227680373771788 1.0707898394648083 1.0117243955066388 1.000198339901224 0.9667484418854273 1.0 13.990101802605842 -7.244375848125816 23.863614612886956 1.0083735662128872 0.9837157351378626 0.14988853592722817 0.029948350364838776 732.0987423881434 1023849.8825338634 0.004343061843760455 0.007506317785429897 5.6967105286188935e-08 7.244375848125816 -0.024657831075024617 KIDS(ph)PQR ddPTM_A549_MK2206_60min_R1 1 KIDSPQR 7 1 Q8IWB6-3;Q8IWB6-2;Q8IWB6 Q8IWB6-3 TEX14 Inactive serine/threonine-protein kinase TEX14 1 KIDS(1)PQR 43.77 0.035976 16237000.0 2478.3 3022.1 2872.5 2741.8 3660.9 2153.7 3009.4 2777.4 4662.0 3837.4 4511.1 True False 2896.5764513823524 3175.9119815672375 3279.8636934587853 3413.541123084081 3122.386459564907 2381.603104489642 3556.16902569544 3171.1049554307706 3606.0644436842103 2970.528674809953 3390.8693699737473 0.8542282628259367 0.9366069981020313 0.9672633580349863 1.006686118112096 0.9208218067064852 0.7023576683840466 1.048748458783292 0.9351893598470653 1.0634630975808217 0.8760374849925142 1.0 11.727439491637897 KIEEAMDGS(ph)ETPQLFTVLPEK ddPTM_A549_PD325901_60min_R1 2 KIEEAMDGSETPQLFTVLPEK 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.543)ET(0.457)PQLFTVLPEK;KIEEAMDGS(0.5)ET(0.5)PQLFT(0.001)VLPEK 67.61399999999999 0.00028575 42941000.0 3396.6 3996.6 4123.8 4095.7 4724.9 4795.3 3970.1000000000004 4428.700000000001 5109.8 4304.6 4777.5 True False 3741.420331555236 4333.407508068918 4403.665866423893 4348.68208699041 4393.039324020106 4756.248666676645 4121.18432802208 4340.366104252063 4895.052875808157 4032.8068213723686 4189.897787067741 0.8929621966204652 1.0342513656166326 1.0510198792953744 1.0378969387780204 1.0484836497872019 1.1351705717874467 0.9836002063683398 1.0359121689432969 1.1682988761484592 0.9625072081280267 1.0 12.032699334341094 -4.306265454384658 1.0213404023749735 1.071177350152533 6.629614185316068e-12 0.28626597670173104 0.06104755109558097 8.960224853518664 1.6750507605059242 0.009932371138329898 16.692052369954528 4.940086411379279e-05 4.306265454384658 -1.0711773501459034 KIEEAMDGS(ph)ETPQLFTVLPEKR ddPTM_A549_MK2206_60min_R1 1 KIEEAMDGSETPQLFTVLPEKR 22 2 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.559)ET(0.441)PQLFTVLPEKR 93.667 4.6078999999999993e-07 45267000.0 1959.4 2537.3 2615.2 2072.9 3511.0 2728.8 2073.2 2227.2 3653.3 3355.8 3093.9 True False 2290.0988172693314 2666.4377323154577 2986.0746844676823 2580.7605930560167 2994.5365509935764 3017.559804769158 2449.873604064528 2542.912420513938 2825.833383121306 2597.7224492956802 2325.5992427039464 0.984734934212767 1.1465594257827598 1.2840022604220531 1.1097185386315302 1.287640835104446 1.297540758252345 1.0534375652857926 1.0934439493355372 1.2150990296314954 1.1170120808412973 1.0 11.183386791457234 -10.89704644422738 0.9026198736138406 0.9888067342493954 1.1712661159302844 0.09291917139395667 0.1025893915039525 0.7071891695938131 0.9136339150056285 0.09231435440322476 0.017209382645876292 1.2675163081522866e-11 10.89704644422738 0.18245938168088904 KIEEAMDGSET(ph)PQLFTVLPEK ddPTM_A549_MK2206_60min_R1 2 KIEEAMDGSETPQLFTVLPEK 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.186)ET(0.814)PQLFTVLPEK;KIEEAMDGS(0.026)ET(0.974)PQLFTVLPEK 125.05 8.1808e-16 18420700.0 2503.0 2839.0 2614.5 2785.2 3348.4 2887.4 2704.7 3059.0 5168.8 3532.7 3793.0 True False 2925.445207525331 2983.4929736505674 2985.275413941862 3467.5741250323795 2855.8547955986583 3192.9427514989984 3196.108979796125 3492.6226177946037 3998.075052877507 2734.6606164332948 2851.093418525509 1.0260783419149675 1.0464381679901358 1.0470633457832286 1.2162260634818811 1.0016700179103957 1.1199011336325424 1.1210116648682267 1.2250116376757911 1.40229535338943 0.9591620529388232 1.0 11.477299595854983 -7.947489234061944 2.613435658104794 1.1972501032525715 1.075497284620533 0.00935230524317332 0.12431950076955128 0.47125210861084493 6.545961760169766 0.024599112602689346 0.034556140753071125 1.1285239127115482e-08 7.947489234061944 -0.12175281863203846 KIEEAMDGSET(ph)PQLFTVLPEK ddPTM_A549_PD325901_60min_R1 2 KIEEAMDGSETPQLFTVLPEK 21 1 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.026)ET(0.974)PQLFTVLPEK;KIEEAMDGS(0.01)ET(0.99)PQLFTVLPEK 123.53 1.4132e-15 17249600.0 3787.2 4503.7 4374.3 4846.8 6450.200000000001 5293.0 5950.200000000001 6117.6 5636.8 5784.7 6628.9 True False 4171.673756010716 4883.242604736524 4671.1663028027615 5146.175828118545 5997.160203981988 5249.89556288856 6176.6381170743725 5995.579668835641 5399.904898500024 5419.453054776925 5813.587324059306 0.7175730789742171 0.8399706295848371 0.8034912081687189 0.8851979924376977 1.0315765240444523 0.903038910443827 1.0624486694321413 1.0313046548768894 0.9288421412632311 0.9322046359136514 1.0 12.50521295044935 -6.440772099210868 2.5760140923959334 0.9770096762185717 0.7887978952117175 0.7171496690191312 0.05418689344599679 0.11933980344830365 1.5415338328720534 0.007690507148561402 0.019959125950528338 3.624331392850948e-07 6.440772099210868 -0.1882117810068542 KIEEAMDGSET(ph)PQLFTVLPEKR ddPTM_A549_MK2206_60min_R1 3 KIEEAMDGSETPQLFTVLPEKR 22 2 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.209)ET(0.791)PQLFTVLPEKR;KIEEAMDGS(0.038)ET(0.96)PQLFT(0.002)VLPEKR;KIEEAMDGS(0.218)ET(0.779)PQLFT(0.003)VLPEKR 115.63 2.2278e-15 100438000.0 5543.1 6271.1 7205.5 6279.799999999999 9800.900000000001 7266.9 5801.700000000001 6403.6 10184.9 9841.0 9945.2 True False 6478.639764216409 6590.272203966212 8227.34824829148 7818.351281910931 8359.200593173722 8035.878534622179 6855.793791578804 7311.329910202519 7878.036411943218 7617.911265128667 7475.532366443414 0.8666459385953686 0.8815789807223621 1.1005702129286283 1.0458587962251868 1.1182080664511558 1.074957359651612 0.917097733715056 0.978034680583021 1.0538428603836414 1.0190459878582523 1.0 12.867960608465046 -5.739362048838583 21.580434690565877 1.030125110298768 0.8741112029251946 0.564953605385562 0.054080328438037784 28.728460637753198 28079.1146049016 0.007707243638557965 0.02975261963000405 1.8223758484432176e-06 5.739362048838583 -0.15601390737357346 KIEEAMDGSET(ph)PQLFTVLPEKR ddPTM_A549_PD325901_60min_R1 5 KIEEAMDGSETPQLFTVLPEKR 22 2 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.02)ET(0.98)PQLFTVLPEKR;KIEEAMDGS(0.088)ET(0.912)PQLFTVLPEKR;KIEEAMDGS(0.012)ET(0.988)PQLFTVLPEKR;KIEEAMDGS(0.018)ET(0.982)PQLFTVLPEKR;KIEEAMDGS(0.241)ET(0.756)PQLFT(0.004)VLPEKR 199.03 6.934199999999998e-61 292959100.0 18408.9 19124.699999999997 20270.3 20712.500000000004 24346.000000000004 22444.7 23197.6 24624.1 23148.9 23418.7 23552.899999999998 True False 20277.757976084085 20736.405587140493 21645.964453216016 21991.864083499513 22636.020949140428 22261.917804716577 24080.397362213786 24132.95300826724 22176.032235468214 21940.03928533966 20656.04261413453 0.9816864902383774 1.0038905309456987 1.0479240800173457 1.064669767308231 1.0958546790395869 1.0777436036795924 1.1657798065218956 1.168324129606197 1.0735857128941815 1.0621608260203004 1.0 14.334276261640321 -5.725328445717708 2.290966259230424 1.063334908110598 0.9829678788229008 0.2754248449207233 0.049472321413443585 0.46256171276983205 4.550873825397104 0.008900436642552485 0.050704462970238 1.8822250727976497e-06 5.725328445717708 -0.08036702928769723 KIEIDNKVS(ph)DEEDKTSEGQER ddPTM_A549_MK2206_60min_R1 3 KIEIDNKVSDEEDKTSEGQER 21 3 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 KIEIDNKVS(1)DEEDKTSEGQER;KIEIDNKVS(1)DEEDKTSEGQER;KIEIDNKVS(1)DEEDKTSEGQER 150.48 8.3176e-23 166095000.0 12180.599999999999 14292.5 14591.2 14216.4 18680.1 15002.599999999999 13036.7 14995.5 20534.2 21501.1 21494.0 True False 14236.387492921705 15019.927201796672 16660.45156623007 17699.41863819844 15932.282035378847 16590.165174080095 15405.299640221896 17121.158046792738 15883.236486379297 16643.986576837524 16156.446595778347 0.8811583294956485 0.9296553615769296 1.0311952858856612 1.095501943033889 0.9861253797937182 1.0268449238346185 0.9535079108451531 1.059710620481763 0.9830897154408669 1.0301761886915513 1.0 13.979822310166428 -5.587136128095139 4.275989932078706 1.004471031958177 0.8903752464142904 0.5447066482762835 0.039109210076890645 0.11398912947170614 4.037728597729522 0.005254018486188318 0.02393576016598755 2.5874017759460987e-06 5.587136128095139 -0.11409578554388666 KIEIDNKVS(ph)DEEDKTSEGQER ddPTM_A549_PD325901_60min_R1 2 KIEIDNKVSDEEDKTSEGQER 21 3 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 KIEIDNKVS(1)DEEDKTSEGQER;KIEIDNKVS(1)DEEDKTSEGQER 200.99 3.7142e-56 116127000.0 7481.2 6392.3 6957.5 8205.0 7262.5 7781.1 7087.799999999999 8020.3 7817.1 7857.7 7947.5 True False 8240.685916631646 6931.001554778798 7429.677788846268 8711.804215092983 6752.4070542648615 7717.733301415484 7357.530107592976 7860.328824696364 7488.574471697511 7361.563480996526 6970.007883353395 1.1823065417634657 0.9944036894609894 1.0659496966410484 1.24989876064553 0.9687804041645012 1.1072775570093536 1.0555985345676735 1.12773600205953 1.0743997133177738 1.0561772101547102 1.0 12.766944572501613 -10.363589019419063 0.5448718401345325 0.9909415476305862 1.092227214935173 0.07597151887456022 0.07659612522046261 1.4588892942283715 0.7178155547139261 0.07197530221674074 0.01679487456678711 4.329233202773186e-11 10.363589019419063 0.10128566730458688 KIEPELDGSAQVTSHDASTNGLINFIK ddPTM_A549_PD325901_60min_R1 1 KIEPELDGSAQVTSHDASTNGLINFIK 27 1 P06744-2;P06744;A0A2U3TZU2;K7EQ48 P06744-2 GPI Glucose-6-phosphate isomerase 0 35.678000000000004 0.047987 31597000.0 1904.1 1625.0 1785.3 1969.9 2731.6 2433.3 2270.3 2449.6 2315.1 2297.8 1951.3 False True 2097.402830275665 1761.9444529379964 1906.4611938810262 2091.5762490325005 2539.7418395084164 2413.484011558043 2356.697508855829 2400.740806325974 2217.804397977114 2152.716515855 1711.3024703098438 1.2256178359258227 1.0295926544294554 1.1140410459033858 1.2222130718094537 1.4840987397444578 1.410319948361358 1.3771367421851097 1.402873453394421 1.295974520258575 1.2579404010707909 1.0 10.740879061350693 -10.549560165250263 0.9319069698187643 1.0061204507397037 1.2840100624764368 0.05328679016057836 0.14747496823537665 0.49580279400844035 0.7940373365738141 0.08734686723642532 0.026676553445411113 2.8212387139951812e-11 10.549560165250263 0.2778896117367331 KIESFGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KIESFGSPK 9 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KIES(0.001)FGS(0.999)PK;KIES(0.007)FGS(0.993)PK 85.554 0.00052868 50073000.0 8280.7 8900.0 8385.3 6882.8 11109.2 8481.5 7940.4 7833.2 12255.7 11247.6 12274.1 True False 9678.279716322424 9352.971985026436 9574.461628811123 8569.086308980628 9475.051396268256 9379.006700435953 9383.067897797591 8943.580088168907 9479.803518331311 8706.759348202546 9226.10222207328 1.0490106746451733 1.0137511768132834 1.0377580259087527 0.9287872714524285 1.026983136345419 1.0165730310246133 1.017013216626711 0.9693779532131734 1.0274982099863426 0.9437093952169514 1.0 13.17150556172436 KIESFGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KIESFGSPK 9 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KIES(0.004)FGS(0.996)PK;KIES(0.012)FGS(0.988)PK 95.417 0.00038492 84886000.0 10428.4 10089.1 11359.5 11640.5 13260.0 11932.9 11872.1 11124.2 12546.9 11650.1 14118.4 True False 11487.083491017675 10939.343864699527 12130.423980222657 12359.507247506383 12328.663344516624 11835.722418740377 12323.899262162398 10902.319104233922 12019.597426020075 10914.510697781494 12381.926303911498 0.9277299193251426 0.8834928908633342 0.9796879485860459 0.9981893724889936 0.9956983301234762 0.9558870024126559 0.995313569122862 0.8805026646613006 0.9707372771410405 0.8814872928401745 1.0 13.595948157180295 -2.000088689807076 0.007783180704212003 1.829504108294161 1.959777240082266e-06 0.0 0.05262671963980716 20760.04108838588 12.151901548749732 1268.1036324111349 1607.319802742331 0.009997958050229586 2.000088689807076 -1.829502148516921 KIFPGLS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 KIFPGLSPVR 10 1 Q5VZK9-2;Q5VZK9;A0A0U1RR91;Q5VZK9-3 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 KIFPGLS(1)PVR;KIFPGLS(1)PVR 79.46600000000001 0.00052621 6559300.0 2093.05 2358.38 1945.9 2035.67 2715.8 2410.27 1794.8600000000001 1790.9 3056.6000000000004 2929.71 2407.51 True False 2446.3056698405508 2478.4114685445684 2221.8578802790103 2534.4092413846997 2316.3094175985066 2665.3231715922607 2120.9628289558455 2044.7655594012274 2364.284980387207 2267.886476228037 1809.6588231042313 1.3518049030061012 1.3695462575056994 1.2277772207181605 1.4004900863231526 1.2799702286562409 1.4728318606599282 1.1720235891302502 1.1299177133807474 1.3064810616244158 1.2532121786015866 1.0 10.821502014781888 -14.16016839717035 0.20362977527837797 8.090470811945957e-14 1.360536512820394 0.1702339826282192 0.11664885805575169 15.869825650800188 0.2546043788303127 6.4460762406228955 0.0758101107404411 6.915627662817449e-15 14.16016839717035 1.360536512820313 KIFPGLS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 KIFPGLSPVR 10 1 Q5VZK9-2;Q5VZK9;A0A0U1RR91;Q5VZK9-3 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 KIFPGLS(1)PVR;KIFPGLS(1)PVR 90.861 0.00027315 11539700.0 3027.1 3663.6 3537.7 3355.1 4041.1 3083.3 3526.1 3374.4 4439.1 3780.5 3896.9 True False 3334.408963566762 3972.3444294053174 3777.7895959182815 3562.3369070150466 3757.2670770381696 3058.190627064858 3660.287665055955 3307.0949448344095 4252.540064386079 3541.798584815834 3417.6060044844116 0.9756563393180833 1.162317840088356 1.1053906128913793 1.0423486213275392 1.0993856729266251 0.8948341684360495 1.0710092562609934 0.967664189638889 1.2443037783776447 1.0363390572723898 1.0 11.73877037151235 -8.728752219504782 24.998687489357746 1.1153658672158706 1.0443702554173424 0.04939237084752279 0.09071513158656809 376.93918900731717 288277.6164576006 0.01827685358931473 0.020723334553381895 1.8674448308519784e-09 8.728752219504782 -0.0709956117985282 KIIETMSS(ph)SK ddPTM_A549_MK2206_60min_R1 1 KIIETMSSSK 10 1 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 KIIET(0.02)MS(0.389)S(0.554)S(0.036)K 59.757 0.0045325 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KIILNAVFGFINNPK ddPTM_A549_PD325901_60min_R1 2 KIILNAVFGFINNPK 15 1 A0A494BZT7;O14656-2;O14656 A0A494BZT7 TOR1A Torsin-1A 0 ; 37.954 0.024444999999999998 17722000.0 3896.5 4270.0 4295.8 4226.5 4501.8 3709.8 4241.5 4195.0 4445.3 4380.9 5123.8 False True 4292.0698115483065 4629.847885566302 4587.338820743914 4487.561305922061 4185.609098366893 3679.5886187802694 4402.912603537856 4111.3274340861635 4258.479499947161 4104.2892263509275 4493.605082444307 0.955150649156206 1.0303192649603923 1.020859362712092 0.9986550272194907 0.9314590449257104 0.8188500215908489 0.9798174345002478 0.9149285170048359 0.9476755126044032 0.9133622450236302 1.0 12.133657624437076 -6.651574414943068 6.897493784450729 0.9559499717630876 1.005592635852335 0.2204920054117646 0.05123146908993085 0.3328752229123383 19.13986020095819 0.007844253309546556 0.016396869191562753 2.2306199652787996e-07 6.651574414943068 0.049642664089247446 KIKENEFS(ph)PTNSTSQTVSSGATNGAESK ddPTM_A549_MK2206_60min_R1 1 KIKENEFSPTNSTSQTVSSGATNGAESK 28 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KIKENEFS(0.538)PT(0.249)NS(0.05)T(0.05)S(0.05)QT(0.05)VS(0.011)S(0.002)GATNGAESK 63.033 0.00014116 2402600.0 561.38 416.84 383.39 334.05 643.24 576.31 341.98 476.08 422.42 505.02 629.17 True False 656.127219576736 438.0553755324066 437.76046699222417 415.89226499607435 548.6202480948757 637.2947416763833 404.11333933917973 543.5657979338521 326.7425444661268 390.9356312483774 472.9297247913774 1.3873672665979542 0.9262589187550965 0.9256353408222175 0.8793954856179449 1.160046026578024 1.3475463864266766 0.8544891939652249 1.1493584975519022 0.6908902683379906 0.8266252061462833 1.0 8.885482011336581 -8.747670888599316 24.9980891341334 0.8540315039995475 1.0661220933968356 0.2521137963604294 0.18235199036870692 279.2596406446238 507023.909180201 0.03307438179342618 0.03740679592743514 1.787841900744897e-09 8.747670888599316 0.2120905893972881 KIKENEFS(ph)PTNSTSQTVSSGATNGAESK ddPTM_A549_PD325901_60min_R1 1 KIKENEFSPTNSTSQTVSSGATNGAESK 28 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KIKENEFS(0.845)PT(0.145)NS(0.004)T(0.003)S(0.003)QTVSSGATNGAESK 107.52 1.6302e-15 2957700.0 515.99 406.4 561.88 462.22 528.16 461.54 676.52 813.55 564.33 873.7 609.26 True False 568.3729249482387 440.64875426092414 600.0125556589205 490.77027962221575 491.06386365308447 457.7813712630995 702.265338805949 797.3231070323712 540.6131726104381 818.5344328934253 534.3248824173503 1.063721611422719 0.8246832007286952 1.122935830621234 0.9184866656441522 0.9190361141922724 0.8567472455934324 1.3143040159926969 1.4922065830533386 1.0117686643463784 1.5319040153815722 1.0 9.06157339185823 KIKNENTEGS(ph)PQEDGVELEGLK ddPTM_A549_MK2206_60min_R1 4 KIKNENTEGSPQEDGVELEGLK 22 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KIKNENT(0.005)EGS(0.995)PQEDGVELEGLK;KIKNENT(0.003)EGS(0.997)PQEDGVELEGLK;KIKNENT(0.005)EGS(0.995)PQEDGVELEGLK;KIKNENT(0.003)EGS(0.997)PQEDGVELEGLK 184.4 4.5441e-50 126821300.0 7903.95 8969.800000000001 9271.5 9185.800000000001 11858.500000000002 9181.7 8603.1 8733.2 13905.4 12308.800000000001 12639.8 True False 9237.943526975565 9426.324506886538 10586.338114500664 11436.32141236624 10114.13035885996 10153.301399680813 10166.17190966985 9971.157844303309 10755.84910236087 9528.23353116714 9500.988819266731 0.972313903605723 0.9921414166672017 1.1142354039016433 1.2036980181657422 1.064534497540915 1.068657335865008 1.0700119853897962 1.0494863254741589 1.1320768087369444 1.002867565936417 1.0 13.213861954991433 -5.662984020799012 6.355950650187336 1.0756826162194038 0.9781711198000096 0.31440687815805557 0.05483314045708153 0.2117188589256317 11.448623399561939 0.008518656224359832 0.033774172214966265 2.1727811215500477e-06 5.662984020799012 -0.09751149641939416 KIKNENTEGS(ph)PQEDGVELEGLK ddPTM_A549_PD325901_60min_R1 4 KIKNENTEGSPQEDGVELEGLK 22 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KIKNENT(0.003)EGS(0.997)PQEDGVELEGLK;KIKNENT(0.003)EGS(0.997)PQEDGVELEGLK;KIKNENT(0.002)EGS(0.998)PQEDGVELEGLK;KIKNENT(0.002)EGS(0.998)PQEDGVELEGLK 227.99 3.7319999999999993e-88 266591000.0 12122.9 12523.499999999998 14811.199999999999 14332.699999999999 14538.9 16651.399999999998 17378.1 17601.4 15356.3 15279.2 16491.4 True False 13353.607883592704 13578.899296227064 15816.377098980924 15217.998327076555 13517.737820482105 16515.79651915407 18039.43310516121 17250.326268968827 14710.92811397173 14314.468704435423 14463.062347597886 0.9232904873573025 0.9388675074392063 1.09357041536973 1.052197519538734 0.9346387020676304 1.141929428375666 1.2472761764839733 1.192716027517773 1.017137848155305 0.9897259902784598 1.0 13.820085434323408 -5.704803449297283 8.321211785419347 1.0477085829370674 0.9297573207890889 0.22956251157214735 0.0911162910763827 0.37376106932074865 48.733953659369874 0.01383165484312193 0.05372826294017639 1.9733156068087236e-06 5.704803449297283 -0.11795126214797846 KILCKS(ph)PQSDPADTPTNTK ddPTM_A549_MK2206_60min_R1 1 KILCKSPQSDPADTPTNTK 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KILCKS(0.789)PQS(0.211)DPADTPTNTK 110.9 1.0978e-10 18162000.0 2270.3 2277.1 2480.3 2596.7 3208.7 2096.0 2163.7 2414.6 3273.2 3390.5 2705.8 True False 2653.471136494111 2392.994663719517 2832.0438359915865 3232.891616570293 2736.704480539186 2317.7973287878035 2556.816282613553 2756.876944402371 2531.8254262263295 2624.583695195484 2033.8751837190412 1.3046381399089142 1.1765690849051063 1.3924373819307114 1.5895231145201305 1.3455616659499168 1.1395966415941006 1.2571156298481838 1.355479906766592 1.2448283191089247 1.2904349864755726 1.0 10.990015430251386 -10.332550301048874 0.39209017684083397 0.9307148819115685 1.3431765809053169 0.05336799633385103 0.14059846918056654 1.178989839192112 0.28383097438729116 0.19835601208124465 0.04148425304712363 4.6499651601401865e-11 10.332550301048874 0.4124616989937484 KILCKS(ph)PQSDPADTPTNTK ddPTM_A549_PD325901_60min_R1 1 KILCKSPQSDPADTPTNTK 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KILCKS(0.951)PQS(0.049)DPADTPTNTK 177.03 3.4376e-35 23910000.0 3469.9 3459.0 4052.7 3667.9 4042.8 3887.6 4050.3 4074.6 3099.1 3504.4 3840.9 True False 3822.1616935946317 3750.502069361554 4327.740592864858 3894.457852594703 3758.847674902854 3855.940674529673 4204.436382909203 3993.3289065381373 2968.8556044105558 3283.1315859353567 3368.4936494711606 1.1346797979549985 1.1134063055010857 1.2847702988973408 1.1561422575952063 1.1158838537495765 1.1447077167965092 1.2481651504877505 1.1854939691410946 0.8813600123238035 0.9746586835485929 1.0 11.717887864116388 -8.753615428034276 24.997068457117457 0.943975559469091 1.1737608122258802 0.7486799682185024 0.0569464955465769 64.43894256391593 205878.54010052816 0.010966641705534146 0.01232419430006162 1.7635369842594386e-09 8.753615428034276 0.2297852527567893 KILCKSPQS(ph)DPADTPTNTK ddPTM_A549_MK2206_60min_R1 1 KILCKSPQSDPADTPTNTK 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KILCKS(0.399)PQS(0.601)DPADTPTNTK 118.51 9.8159e-15 21248000.0 6932.4 7836.0 7668.8 6103.3 10308.0 8405.0 7388.1 6466.2 10864.0 10545.0 10864.0 True False 8102.419639092535 8234.818929737889 8756.351154881371 7598.6087739875475 8791.706854925025 9294.41152121254 8730.422136884596 7382.803651906978 8403.321346243085 8162.877176179436 8166.168968853448 0.992193483871806 1.0084066299811183 1.0722716108715036 0.9304985976863044 1.0766011441175707 1.1381605691312924 1.0690964355725756 0.9040718701836442 1.0290408364429096 0.9995968987800072 1.0 12.995443703805478 -2.8603255217400516 17.88458257824285 1.0190550432024987 0.36514001547023334 0.0 0.06436653589780664 0.0 0.0 0.00809931631027666 0.0 0.0013793499969638977 2.8603255217400516 -0.6539150277322654 KILCKSPQS(ph)DPADTPTNTK ddPTM_A549_PD325901_60min_R1 1 KILCKSPQSDPADTPTNTK 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KILCKS(0.24)PQS(0.76)DPADTPTNTK 175.28 5.0017e-35 23763000.0 3069.7 3784.9 4055.8 3968.2 4160.6 4033.8 4247.0 4010.0 3052.5 4080.7 3972.3 True False 3381.3336842062977 4103.866806107704 4331.050977506675 4213.306701563919 3868.373809290792 4000.9500702021296 4408.621909047574 3930.017404215858 2924.2140403546896 3823.0439055833804 3483.732282484389 0.9706066396683425 1.1780086623594028 1.2432215297606133 1.209423216229245 1.1104107593859365 1.1484665714177358 1.265488146495462 1.1281054586126822 0.8393911481249975 1.0973988801622307 1.0 11.76641804477211 -8.665564425923586 6.214443315425359 0.9244832762822166 1.1659334119762164 0.3700896003006032 0.09665070834244323 0.10481709789639354 5.742125683163799 0.015315004134209064 0.01734347368827257 2.1599095966885306e-09 8.665564425923586 0.24145013569399976 KILGQSS(ph)PEKK ddPTM_A549_MK2206_60min_R1 2 KILGQSSPEKK 11 2 P29374;P29374-3;P29374-2;H7C485 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 KILGQS(0.053)S(0.947)PEKK;KILGQS(0.146)S(0.854)PEKK 76.72800000000001 0.00024746 33327000.0 12992.7 13695.099999999999 13189.2 11409.5 17330.4 13246.5 13474.1 13209.0 19046.6 20686.0 18808.2 True False 15185.550118982974 14392.122093498378 15059.626884514058 14204.828012191922 14781.121117442059 14648.235837684946 15922.169558424583 15081.416200865942 14732.57551117023 16013.01823294905 14137.604860087384 1.0741246674572225 1.018002853802311 1.0652176966007647 1.0047549180196937 1.045518053710174 1.036118634142842 1.1262282201262603 1.0667589277051506 1.0420842608752305 1.1326542502369865 1.0 13.787250104423574 -10.055520142320479 0.9493713014862648 1.0044646879196883 1.0524308394253143 0.0 0.04908170174619397 0.48452673986312744 0.8786394063469195 0.012180973091242244 0.00598697876767195 8.799942971273009e-11 10.055520142320479 0.047966151505626 KILGQSS(ph)PEKK ddPTM_A549_PD325901_60min_R1 1 KILGQSSPEKK 11 2 P29374;P29374-3;P29374-2;H7C485 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 KILGQS(0.361)S(0.639)PEKK 53.376999999999995 0.0043007 25278000.0 11601.0 11782.0 12265.0 11639.0 13478.0 11840.0 12041.0 12096.0 13045.0 12308.0 12773.0 True False 12778.724979795184 12774.9104889326 13097.376655436503 12357.914595913133 12531.351776575799 11743.578965539495 12499.226844088018 11854.735790871564 12496.764015209486 11530.870779503579 11202.00197471821 1.1407536803363791 1.1404131616620214 1.1691996381536052 1.1031880394061437 1.118670734468517 1.0483464466479804 1.1158029495350485 1.0582693894918522 1.1155830933982536 1.0293580384584462 1.0 13.451468967269436 -14.999999999999979 0.1452709619222963 0.5993601212320258 1.1544005138999422 0.6702178119779947 0.028974226025303126 27.004308976973615 0.26075399976607005 3.1318820365770703 0.06303692861013392 1.000000000000049e-15 14.999999999999979 0.5550403926679165 KINS(ph)APPTETK ddPTM_A549_MK2206_60min_R1 2 KINSAPPTETK 11 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 KINS(0.997)APPT(0.003)ETK;KINS(0.965)APPT(0.031)ET(0.004)K 80.53399999999999 0.00036219 14097400.0 5393.5 5576.7 5337.7 4937.2 7583.700000000001 6420.0 5572.1 5342.5 8188.3 8892.900000000001 8639.9 True False 6303.790941585249 5860.530209988419 6094.666122393373 6146.814221639328 6468.147776066646 7099.360138748905 6584.478443569339 6099.815735720058 6333.663124028186 6883.987713612716 6494.374380890732 0.9706540725668261 0.9024010422362841 0.9384531542139803 0.9464828882865027 0.9959616426023642 1.0931553560629803 1.0138741713048962 0.9392460886869046 0.9752537738915348 1.0599924349708565 1.0 12.664974838655676 -6.699008912420738 4.538164512877179 0.9947874248062318 0.9353355580849694 0.35755638092999564 0.042801560449051555 0.1965811718620709 8.034733400868534 0.005766254310400621 0.012141275290159735 1.9998208296742373e-07 6.699008912420738 -0.05945186672126246 KINSAPSS(ph)PIK ddPTM_A549_PD325901_60min_R1 2 KINSAPSSPIK 11 1 A0AVK6 A0AVK6 E2F8 Transcription factor E2F8 1 KINSAPS(0.039)S(0.961)PIK;KINS(0.015)APS(0.095)S(0.89)PIK 85.837 0.00016477 6693000.0 4842.9 4361.8 4384.9 5207.6 5945.0 5898.7 4961.7 5152.700000000001 5644.0 5884.0 5508.1 True False 5334.54764284545 4729.384193738431 4682.485682545742 5529.261624682293 5527.4437091366035 5850.662942907749 5150.5202086464205 5049.925356285046 5406.802307538698 5512.483235830275 4830.638618722726 1.1043151980298545 0.9790391223653432 0.969330569336574 1.144623322318466 1.1442469920463891 1.211157241245823 1.0662193169830358 1.0453949787741112 1.1192727782581087 1.1411499950472046 1.0 12.237998213093896 -4.89097455547945 19.8990682447994 1.0680495649723376 6.463489855036874 0.0 0.0756381986869747 2391.7077124913844 450941.54447289504 0.010785400937742716 19388.885685219946 1.2853619647476883e-05 4.89097455547945 5.395440290064537 KIPEFEVENS(ph)PLSDVAK ddPTM_A549_MK2206_60min_R1 3 KIPEFEVENSPLSDVAK 17 1 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9;Q7Z4H7-2 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 KIPEFEVENS(1)PLSDVAK;KIPEFEVENS(1)PLSDVAK;KIPEFEVENS(0.999)PLS(0.001)DVAK 143.95 1.2107000000000001e-16 12460800.0 5232.9 5902.0 6383.1 5528.1 8240.8 6999.6 6284.099999999999 5736.400000000001 8935.8 8647.5 9549.900000000001 True False 6116.085587878269 6202.386590519778 7288.319561955361 6882.484748165843 7028.589236521747 7740.293026041557 7425.839627292058 6549.552266988218 6911.855567540405 6694.023744050421 7178.3962661684 0.8520128119289297 0.8640351355011522 1.0153130715707388 0.9587774891451478 0.9791308498316414 1.0782760854985622 1.0344705630545714 0.9123977033499937 0.9628690464074553 0.932523574325255 1.0 12.80944585053777 -5.7518288500029024 24.490184272459274 0.9871632132077001 0.8580238492193378 0.5534434278004494 0.04431791672895871 80.6477200248182 205505.8282085108 0.005813982212339779 0.02192196595605151 1.770806673482493e-06 5.7518288500029024 -0.12913936398836223 KIPEFEVENS(ph)PLSDVAK ddPTM_A549_PD325901_60min_R1 2 KIPEFEVENSPLSDVAK 17 1 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9;Q7Z4H7-2 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 KIPEFEVENS(1)PLSDVAK;KIPEFEVENS(1)PLSDVAK 159.14 1.276e-22 37201000.0 8518.900000000001 6866.700000000001 8584.0 7514.4 8864.1 8730.0 7380.299999999999 8494.1 7636.8 7992.7 9252.9 True False 9383.73245671728 7445.380907685747 9166.561859785317 7978.547421559376 8241.51619548491 8658.905774422275 7661.161355155119 8324.678512007462 7315.851853687371 7488.039557957286 8114.8519589657935 1.1563652059418716 0.9175005219238321 1.1296030914843158 0.983203077752291 1.015608939899288 1.0670442071164807 0.9440913270993923 1.0258571017811162 0.9015385481683819 0.9227573831071599 1.0 12.986349060271555 -7.767568494275881 24.99676290182242 0.9582590022176252 1.0388132180667737 0.27668180799698494 0.06888466978614945 155.9966329523866 636211.9598462987 0.010266397319528948 0.014378597676090692 1.707778358436377e-08 7.767568494275881 0.08055421584914857 KIPEPS(ph)PVTR ddPTM_A549_MK2206_60min_R1 4 KIPEPSPVTR 10 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KIPEPS(0.957)PVT(0.043)R;KIPEPS(0.999)PVT(0.001)R;KIPEPS(1)PVTR;KIPEPS(0.995)PVT(0.005)R 136.21 2.3287e-07 762901000.0 14774.7 15353.5 14797.699999999999 13966.1 19857.6 16836.0 15303.0 14887.7 23303.0 22076.199999999997 23969.999999999996 True False 17268.30815326589 16134.927569899255 16896.236371347288 17387.79512696205 16936.573345203647 18617.574345167675 18083.357014759527 16998.07706666907 18024.907707244332 17089.171087413222 18017.587461654726 0.9584140046505415 0.8955098791243737 0.9377635272927681 0.9650456901606272 0.9400022828388258 1.033300067769331 1.003650297424379 0.9434158209496475 1.0004062833387204 0.9484716599146599 1.0 14.13711822809724 -7.229632135039761 20.010248502212548 0.9978224300301942 0.9382512252932644 0.38131430938124333 0.029625282082141498 33.68340707223932 21190.03025319434 0.003721049115402397 0.006443529529332736 5.8934264100612256e-08 7.229632135039761 -0.059571204736929784 KIPEPS(ph)PVTR ddPTM_A549_PD325901_60min_R1 8 KIPEPSPVTR 10 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KIPEPS(0.997)PVT(0.003)R;KIPEPS(0.993)PVT(0.007)R;KIPEPS(0.942)PVT(0.058)R;KIPEPS(0.999)PVT(0.001)R;KIPEPS(0.986)PVT(0.014)R;KIPEPS(0.978)PVT(0.022)R;KIPEPS(0.936)PVT(0.064)R;KIPEPS(0.994)PVT(0.006)R 124.81 7.826699999999999e-06 1015707200.0 54444.6 44322.100000000006 46417.5 51404.6 55695.4 55866.5 51997.5 52874.299999999996 52987.50000000001 53241.00000000001 59223.1 True False 59971.77571200382 48057.278915423456 49567.67068110265 54579.74539368299 51783.54724269921 55411.541746479044 53976.29331662378 51819.68060741406 50760.61964399479 49879.35417383408 51939.03414616254 1.1546571224878037 0.9252632380529955 0.9543433276331902 1.0508425174039466 0.9970063574338758 1.0668573772578145 1.0392240480392483 0.997702045470992 0.9773115822898909 0.9603442765891201 1.0 15.664531565581605 KIPEPS(ph)PVTRR ddPTM_A549_MK2206_60min_R1 2 KIPEPSPVTRR 11 2 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KIPEPS(0.907)PVT(0.093)RR;KIPEPS(1)PVTRR 75.764 0.00026509 53766000.0 2257.21 2352.31 2313.35 1907.9499999999998 3223.8 2142.51 2002.73 2231.84 3811.9 3512.6 3569.0 True False 2638.171864513885 2472.032531471635 2641.417815583248 2375.397835651129 2749.5832905420352 2369.2289861169634 2366.600117242982 2548.210154723343 2948.5107363534617 2719.1012203933506 2682.718800611005 0.9833948544711528 0.9214653920897766 0.9846048027775589 0.8854442124571975 1.0249241515420109 0.8831447356977398 0.88216480859044 0.9498610715901246 1.0990755854403826 1.01356177165272 1.0 11.389480125609769 -8.666368070477779 7.188714032638029 1.0466607413517515 0.9368843269895661 0.4352488107730126 0.04957727797235976 0.14386488517845375 9.445365379950903 0.009001631296957763 0.010199699182862945 2.1559164661434085e-09 8.666368070477779 -0.10977641436218533 KIPEPS(ph)PVTRR ddPTM_A549_PD325901_60min_R1 4 KIPEPSPVTRR 11 2 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KIPEPS(1)PVTRR;KIPEPS(0.794)PVT(0.206)RR;KIPEPS(1)PVTRR;KIPEPS(0.993)PVT(0.007)RR 82.65100000000001 0.00013917 133009000.0 7335.6 7409.9 8658.7 8650.5 11013.3 10865.5 9678.8 10222.3 10305.0 9783.6 10924.8 True False 8080.304711816701 8034.3582780463075 9246.331450992904 9184.82173828907 10239.76380182239 10777.014970445043 10047.132030442577 10018.408207260787 9871.916686602817 9165.861826320379 9581.118858013111 0.8433571101206814 0.8385615915125424 0.9650575875342357 0.9586376992502708 1.0687440531288708 1.1248180019634921 1.0486387006920093 1.0456407394301295 1.0303511346533916 0.9566588163818222 1.0 13.22597842461665 -5.964345860435332 1.5498836767779811 1.0298935728570773 0.8274371588127243 0.7281592201427866 0.044404209394712256 0.17085169962187627 0.7293917074425289 0.006322198805608796 0.0348840885682443 1.085560767913724e-06 5.964345860435332 -0.202456414044353 KIPGKRS(ph)PR ddPTM_A549_MK2206_60min_R1 1 KIPGKRSPR 9 3 B1AQM9;Q6PJW8-3;Q6PJW8-2;Q6PJW8 B1AQM9 CNST Consortin 1 KIPGKRS(1)PR 46.706 0.010589 11780000.0 2655.9 2454.2 2270.5 1397.7 3288.0 2683.3 2541.0 2154.2 3182.8 4158.4 4319.8 True False 3104.1509894792357 2579.1082972642585 2592.49104125263 1740.1365627451382 2804.339555587263 2967.2450249696144 3002.6668087632465 2459.5644469608146 2461.900881887194 3219.0145518657714 3247.074439585155 0.9559839317622238 0.7942867788376803 0.7984082562590853 0.5359090452411857 0.8636511443653705 0.9138210657556434 0.9247298959819554 0.7574709150416176 0.7581904658156607 0.9913584094724455 1.0 11.664924743628353 -6.9664638364583436 24.99991933489022 0.8779034766652873 0.7653762306804106 0.18231538597852814 0.11716771035207825 289.25761416023045 215629.24931744454 0.018675430735567232 0.03529311808341349 1.0802795716190643e-07 6.9664638364583436 -0.11252724598487673 KIPLKPS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 KIPLKPSPSK 10 2 A6PW57;Q99755-4;Q99755-3;Q99755;A2A3N6 A6PW57;A2A3N6 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein 1 KIPLKPS(0.902)PS(0.098)K 67.456 0.00093961 6020600.0 2730.1 3315.4 3670.9 3014.9 4370.3 4018.1 2943.6 3598.8 5452.0 4432.0 5279.4 True False 3190.874135463405 3484.139698781645 4191.48881890961 3753.550635344004 3727.434659301405 4443.292675001086 3478.414017424436 4108.940920862772 4217.13070505498 3430.8081218423204 3968.379275972467 0.804074891425661 0.8779754797826987 1.0562218294728065 0.9458648920154392 0.9392838738651014 1.119674397531531 0.8765326536415895 1.035420416022574 1.0626833807415135 0.8645363467688172 1.0 11.954334201872651 -4.174481086697384 0.6703925880331664 1.0215590771965668 2.6419194246312953e-16 0.2540638356096546 0.08246813212179008 6.435978053225202 0.6784572209405555 0.010515935653182653 7.058834941899744 6.69142960245096e-05 4.174481086697384 -1.0215590771965666 KIPLKPS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 KIPLKPSPSK 10 2 A6PW57;Q99755-4;Q99755-3;Q99755;A2A3N6 A6PW57;A2A3N6 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein 1 KIPLKPS(0.851)PS(0.149)K;KIPLKPS(0.893)PS(0.107)K 67.964 0.00088863 20782500.0 8974.7 9291.2 9481.6 9456.8 11449.8 10545.3 11345.3 10920.400000000001 12197.2 10952.4 11586.7 True False 9885.80493717505 10074.202031469238 10125.0783934926 10040.925058048913 10645.605547665644 10459.422573083066 11777.051599886368 10702.584055111936 11684.594100905568 10260.863594851719 10161.609354142915 0.9728581952566974 0.9913982795807792 0.9964050024580584 0.9881235056487585 1.0476298760024074 1.0293076823326939 1.1589750392328193 1.0532371086228054 1.1498763329394992 1.0097675709870049 1.0 13.310841287896944 -6.983514307222789 1.703432291726355 1.0763145519722919 0.9861812102815404 0.3735347185054507 0.04795983353618905 0.33933399920164486 1.963313585111884 0.009067436355872932 0.01958659272572436 1.0386893836935647e-07 6.983514307222789 -0.09013334169075149 KIPPLVHS(ph)KTPEGNNGR ddPTM_A549_MK2206_60min_R1 1 KIPPLVHSKTPEGNNGR 17 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4;E5RGW7;E5RG47;E7EWM2;E7EMW0 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 KIPPLVHS(0.5)KT(0.5)PEGNNGR 47.047 0.0050838 4504100.0 2697.1 3062.4 3315.2 2894.4 3720.1 2592.0 2504.6 3159.7 4387.4 4300.4 4432.2 True False 3152.304542235947 3218.2630794320194 3785.3452102887964 3603.5281299345534 3172.8782179866707 2866.2837195696493 2959.6533999324793 3607.597151175419 3393.6609052381173 3328.936653242489 3331.5624175029675 0.9461940516781986 0.9659921310566749 1.136207201282437 1.0816330833253385 0.9523694352287622 0.8603421939541364 0.8883679874593984 1.082854438572801 1.0186394489891302 0.9992118519987248 1.0 11.701983207707862 -5.539651106535935 24.992066777319206 1.0049774067221944 0.9511433841280733 0.05088459515079646 0.07787872122376023 487.1177082394078 725841.9847189912 0.01104162732553783 0.04278516546174718 2.8863493406045834e-06 5.539651106535935 -0.05383402259412107 KIPPLVHSKT(ph)PEGNNGR ddPTM_A549_MK2206_60min_R1 2 KIPPLVHSKTPEGNNGR 17 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4;E5RGW7;E5RG47;E7EWM2;E7EMW0 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 KIPPLVHS(0.181)KT(0.819)PEGNNGR;KIPPLVHS(0.047)KT(0.953)PEGNNGR 62.361999999999995 0.0019659000000000005 7822200.0 1935.9499999999998 2470.71 2306.9 2527.3 3012.6 2469.1000000000004 2168.37 2247.5 3352.0 2995.8 3118.2 True False 2262.691030566786 2596.458585744344 2634.053108595328 3146.4886134548065 2569.4505307670897 2730.3785231440684 2562.334761164094 2566.0900076800813 2592.7773520440733 2319.04669932654 2343.864882058063 0.9653675209212568 1.1077680311778415 1.123807574727798 1.3424360071012236 1.0962451591966123 1.1649044038522485 1.0932092463086867 1.0948114062901486 1.1061974484499504 0.9894114277143267 1.0 11.19467368906244 -10.21005661063519 0.5035406942155177 0.9894112649446012 1.1344349673971108 0.25441187538417465 0.08398912075106005 1.2694273967485363 0.5622284235813956 0.08455969508147784 0.022131724261927745 6.165146334449769e-11 10.21005661063519 0.14502370245250962 KIPPLVHSKT(ph)PEGNNGR ddPTM_A549_PD325901_60min_R1 3 KIPPLVHSKTPEGNNGR 17 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4;E5RGW7;E5RG47;E7EWM2;E7EMW0 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 KIPPLVHS(0.047)KT(0.953)PEGNNGR;KIPPLVHS(0.183)KT(0.817)PEGNNGR;KIPPLVHS(0.103)KT(0.897)PEGNNGR 75.334 0.00029838 20691900.0 4012.2 4164.6 4807.1 4161.2 6044.8 5051.6 4841.700000000001 5142.6 5136.0 4915.5 4914.3 True False 4419.515590374468 4515.565457664971 5133.338713440588 4418.227873229119 5620.234101427912 5010.461444452642 5025.953542979899 5040.026808708343 4920.151780921108 4605.134491115524 4309.8722543143895 1.0254400431359236 1.047726055718861 1.1910651663287397 1.0251412600005163 1.3040372822655677 1.1625545141011846 1.1661490750563843 1.169414430709178 1.1416003748129193 1.0685083499877666 1.0 12.073429392770331 -10.531994879584442 0.85123889570592 1.0004439381736334 1.1396874928106828 0.18016638324218648 0.08003814379786521 0.5933730178620743 0.7747149404363782 0.050559866527235355 0.014466119653634726 2.937684287620706e-11 10.531994879584442 0.1392435546370494 KIPSVEDS(ph)LGEGSR ddPTM_A549_PD325901_60min_R1 1 KIPSVEDSLGEGSR 14 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KIPS(0.001)VEDS(0.997)LGEGS(0.002)R 59.342 0.0034939 4126300.0 2609.3 2566.4 2461.5 2583.2 2474.7 2893.8 2708.0 2895.5 2868.4 2896.6 3179.5 True False 2874.194215134866 2782.6795347815832 2628.5521922019534 2742.7583971271415 2300.88560925153 2870.2338522363325 2811.054421874459 2837.746981024191 2747.851123129696 2713.7081816631503 2788.4416565111214 1.0307528609836643 0.9979335691976615 0.9426599212015716 0.9836169212013787 0.8251510673995531 1.0293325827830118 1.008109463330723 1.0176820355548555 0.9854432911348011 0.9731988386153013 1.0 11.445243369969974 KIPVFHNGS(ph)TPTLGETPK ddPTM_A549_MK2206_60min_R1 2 KIPVFHNGSTPTLGETPK 18 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q9Y6M7-5;H7C3C4;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 KIPVFHNGS(0.827)T(0.167)PT(0.006)LGETPK;KIPVFHNGS(0.901)T(0.094)PT(0.005)LGETPK 76.704 9.594700000000001e-05 5647000.0 1444.1799999999998 2234.7 2295.7 1894.43 2488.7 2036.6999999999998 2209.1000000000004 1828.75 3077.7 3103.2 2885.4 True False 1687.922277188947 2348.43668482456 2621.26478018219 2358.5654350441937 2122.615526760955 2252.2222421479587 2610.464874946433 2087.98091281199 2380.6058640769825 2402.184964733998 2168.875547011204 0.7782476405872943 1.0827899683136721 1.2085823844500418 1.087460015072967 0.9786709660155479 1.0384285282074435 1.2036028893145836 0.9627020396303098 1.0976221606433578 1.107571602273032 1.0 11.082731556270243 KIPVFHNGS(ph)TPTLGETPK ddPTM_A549_PD325901_60min_R1 2 KIPVFHNGSTPTLGETPK 18 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q9Y6M7-5;H7C3C4;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 KIPVFHNGS(0.868)T(0.128)PT(0.003)LGETPK;KIPVFHNGS(0.868)T(0.128)PT(0.003)LGETPK 89.66799999999999 1.3841e-06 14791400.0 2744.3 2579.5 2796.6 2964.9 3971.3999999999996 3538.4 3514.8 3666.6 3633.6 3551.3 3819.7 True False 3022.8993157531168 2796.8835177560377 2986.3940933219483 3148.035139223546 3692.4625645862247 3509.58444355278 3648.5576373723597 3593.4667866079426 3480.8924281843733 3327.0703119313503 3349.9011150732886 0.9023846411917094 0.8349152472504694 0.8914872382006453 0.9397397209901445 1.102260167612572 1.0476680722786045 1.0891538323191778 1.0727083168033529 1.039103038749912 0.9931846337077808 1.0 11.709902794292512 -6.527113055312156 3.8635455809518287 1.035543304394266 0.8754346421698419 0.8098403986343997 0.0369630978788495 0.0794574489647028 2.6468103379158903 0.005812520487057916 0.01328981181116097 2.9708925498730146e-07 6.527113055312156 -0.160108662224424 KIQALQQQADEAEDR ddPTM_A549_PD325901_60min_R1 2 KIQALQQQADEAEDR 15 1 P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A590UJB9;A0A590UK79 P67936 TPM4 Tropomyosin alpha-4 chain 0 ; 165.34 3.5555999999999996e-20 9969700.0 5147.3 4583.4 5740.7 5718.6 6282.4 7075.9 5508.1 5730.6 6223.9 5864.3 6323.2 False True 5669.850106758016 4969.659203443696 6130.298423633457 6071.824934117094 5841.145897103411 7018.276216407165 5717.713759647975 5616.2986874312655 5962.33112719527 5494.027097192299 5545.486486067344 1.0224260975124775 0.8961628913765501 1.105457282969747 1.0949129439539955 1.0533153244136273 1.265583503636715 1.031057198320353 1.0127693398120854 1.0751682728242544 0.990720491519665 1.0 12.43709831317359 -5.767104396092844 24.99983442350634 1.058332566335486 0.9592944918326487 0.22290016169059557 0.07721615729609284 148.51976197397232 655434.4936020316 0.010634629421447836 0.0344269814180625 1.7096043094927326e-06 5.767104396092844 -0.09903807450283719 KIQEESLR ddPTM_A549_PD325901_60min_R1 1 KIQEESLR 8 1 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 0 74.16199999999999 0.0051286000000000005 1616500.0 1085.6 1201.3 1205.0 1104.1 1549.4 1312.0 1098.3 1238.3 1510.4 1735.4 1613.1 False True 1195.8093128235187 1302.5377669627162 1286.7785462536476 1172.2977494069664 1440.5754891398244 1301.3155069922136 1140.0964075128213 1213.601135072442 1446.9231405574856 1625.8265478347828 1414.6989262834056 0.8452747723256299 0.9207172938093966 0.9095776651461657 0.8286552902720736 1.018291215449212 0.9198533220145542 0.8058933150589149 0.8578511742146627 1.022778142879303 1.1492385536094498 1.0 10.466279338585537 -8.767532194080884 24.999331011418395 1.0107563537164044 0.8907110061228978 0.5176367069296473 0.06876113974676269 86.85825599787697 356385.88542665157 0.009455302084575882 0.0101911340854433 1.707921107840034e-09 8.767532194080884 -0.1200453475935066 KIQQGEEEEKES(ph)SGEIEAAPVTGTGR ddPTM_A549_MK2206_60min_R1 1 KIQQGEEEEKESSGEIEAAPVTGTGR 26 2 A0A087WXZ7;K7EIX2;Q6AI08;K7ELR8 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KIQQGEEEEKES(0.951)S(0.049)GEIEAAPVTGTGR 175.34 6.5671e-49 31761000.0 3963.0 4387.8 3619.3 4133.4 4915.0 3483.8 4049.4 3252.9 5711.3 5488.3 5211.3 True False 4631.857513952415 4611.1202781909 4132.571163006225 5146.083185555377 4192.010010861128 3852.453403640723 4785.123563717391 3714.0085365884493 4417.699669071989 4248.48921821011 3917.1903854368497 1.1824438074729586 1.177149901963895 1.054983484685888 1.3137179149339404 1.0701573317564521 0.983473618735305 1.2215703330395438 0.9481307189959975 1.1277725191749448 1.0845756269608309 1.0 11.935603533310896 -14.999900122251757 0.021235388761568004 0.03646569595059601 1.8653055752226675 0.16801354059788032 0.09660966114125188 2243.1480693899966 3.698275427069943 216.82885034152676 116.31960217282999 1.0002300034609662e-15 14.999900122251757 1.8288398792720715 KIQQGEEEEKES(ph)SGEIEAAPVTGTGR ddPTM_A549_PD325901_60min_R1 2 KIQQGEEEEKESSGEIEAAPVTGTGR 26 2 A0A087WXZ7;K7EIX2;Q6AI08;K7ELR8 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KIQQGEEEEKES(0.5)S(0.5)GEIEAAPVTGTGR;KIQQGEEEEKES(0.956)S(0.044)GEIEAAPVTGTGR 260.9 7.097199999999998e-126 85351000.0 9328.2 9792.9 10051.5 10242.599999999999 10992.3 8456.2 10234.8 10964.9 10417.3 10597.0 11107.0 True False 10275.191996942112 10618.18205118554 10733.655234579695 10875.262139367629 10220.238769376325 8387.335510844176 10624.290914697458 10746.196467702355 9979.497108136584 9927.90361150466 9740.909413074074 1.0548493535060426 1.0900606504906007 1.101915106629898 1.1164524458846776 1.0492078650951115 0.8610423478106515 1.0906877853147596 1.1032025873558584 1.0244933696583074 1.019196790617887 1.0 13.249840753528805 -4.293075066268213 0.15683513339407051 0.9906055822281054 1.217406748435342 0.10441533312611084 0.06562301938344761 43.56145253997894 0.8127484317222072 0.12904210020274995 2.048630178652877 5.0924284262190374e-05 4.293075066268213 0.22680116620723656 KIQQGEEEEKESS(ph)GEIEAAPVTGTGR ddPTM_A549_MK2206_60min_R1 1 KIQQGEEEEKESSGEIEAAPVTGTGR 26 2 A0A087WXZ7;K7EIX2;Q6AI08;K7ELR8 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KIQQGEEEEKES(0.397)S(0.603)GEIEAAPVTGTGR 184.55 7.5441e-58 22776000.0 4993.2 4519.4 4629.0 4792.9 6484.9 4940.9 4839.4 4363.3 8332.0 6859.2 6978.5 True False 5835.930087980619 4749.418156081852 5285.461805751337 5967.160715161457 5530.979800495087 5463.742758496023 5718.6563377917555 4981.811137045828 6444.815303469932 5309.701956078709 5245.545853198064 1.1125496280663745 0.9054192431062753 1.0076094945445835 1.1375671631053315 1.0544145366917348 1.0415966062263913 1.0901928031579877 0.9497221598031702 1.2286262447864613 1.0122305866112162 1.0 12.35687719258889 -6.16004853979042 6.972691971859139 1.0905034481156433 0.9967494696996687 0.011574616613197364 0.08576887066365847 0.3897424174128545 23.330236622888282 0.013727643880755994 0.03668790994364384 6.917536513692727e-07 6.16004853979042 -0.09375397841597455 KIQSSLS(ph)SASPSK ddPTM_A549_MK2206_60min_R1 1 KIQSSLSSASPSK 13 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KIQS(0.001)S(0.013)LS(0.55)S(0.284)AS(0.149)PS(0.002)K 149.97 3.5913e-13 37923000.0 3056.3 3566.8 3451.5 3262.4 4491.1 3193.7 3239.9 3487.8 4258.3 4829.5 4208.7 True False 3572.1287206391016 3748.3348849654258 3940.9745998165363 4061.688146454702 3830.465139324198 3531.6552141935153 3828.5478920551163 3982.206330939529 3293.8018491077787 3738.512595766578 3163.5636357891644 1.1291471049382003 1.184845736169422 1.2457389999153419 1.2838964579391166 1.210807045570516 1.1163534610905745 1.2102010052028143 1.2587723179926331 1.0411681977391696 1.18174091820789 1.0 11.62733490093972 -8.837032034843705 6.001342557182606 1.0182684002673965 1.2055273708240226 0.3496582338446549 0.06888857960811574 0.07421876273208987 4.495967623697182 0.008919627873745058 0.009479870644742271 1.4553517255808378e-09 8.837032034843705 0.1872589705566261 KIQSSLS(ph)SASPSK ddPTM_A549_PD325901_60min_R1 1 KIQSSLSSASPSK 13 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KIQS(0.005)S(0.003)LS(0.678)S(0.155)AS(0.158)PS(0.002)K 176.49 2.039e-22 55285000.0 5492.5 5130.7 5046.1 5622.8 6307.0 6489.6 6181.7 6244.2 5101.7 5787.0 6043.8 True False 6050.094556635209 5563.082095193219 5388.5586906643375 5970.107585694679 5864.018077968809 6436.750849220021 6416.947976256039 6119.654532519862 4887.293290639649 5421.6078323844 5300.4509148048155 1.1414301639387974 1.049548837374353 1.016622694422738 1.1263395665111113 1.106324381118195 1.2143779751344135 1.2106419018677654 1.1545535711738995 0.9220523629393178 1.0228578510634214 1.0 12.371899381107971 -8.758725989507163 24.999905359543135 0.9631913896959671 1.1261124300210672 0.5263542450351069 0.06092363184815606 38.30867981173592 352957.850652527 0.011489330598077668 0.012743061129606506 1.7429061826736823e-09 8.758725989507163 0.16292104032510013 KIQSSLSSAS(ph)PSK ddPTM_A549_MK2206_60min_R1 3 KIQSSLSSASPSK 13 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KIQS(0.006)S(0.006)LS(0.339)S(0.241)AS(0.395)PS(0.013)K;KIQSSLS(0.002)S(0.09)AS(0.818)PS(0.09)K;KIQSSLS(0.015)S(0.116)AS(0.864)PS(0.004)K 129.05 2.0369000000000002e-08 32322900.0 3119.09 3602.65 3304.16 2911.9 4384.83 3329.84 3738.2500000000005 3303.81 5202.32 4413.39 4897.549999999999 True False 3645.516137570989 3786.009496837699 3772.739572281562 3625.31563072016 3739.827315549178 3682.2014586310966 4417.441636308229 3772.1351849937832 4024.0028263979484 3416.402133767524 3681.353169496335 0.9902652556613445 1.0284287658702636 1.024824133566552 0.9847780052072966 1.0158838729566506 1.000230428621136 1.1999505162697015 1.0246599582592801 1.0930770945153554 0.9280289003716913 1.0 11.846020445533219 KIQSSLSSAS(ph)PSK ddPTM_A549_PD325901_60min_R1 3 KIQSSLSSASPSK 13 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KIQSSLS(0.005)S(0.005)AS(0.976)PS(0.013)K;KIQSSLSS(0.003)AS(0.994)PS(0.002)K;KIQSSLSS(0.001)AS(0.996)PS(0.003)K 153.75 2.2507e-14 75493700.0 5444.82 5892.66 5144.74 5435.379999999999 6632.52 6908.6 6416.340000000001 6779.509999999999 5820.210000000001 6184.599999999999 5871.58 True False 5997.574118135364 6389.255138492071 5493.892994234849 5771.1110779563805 6166.674676151841 6852.338652139034 6660.5173298559685 6644.287354627288 5575.606814025477 5794.103300529559 5149.412883012284 1.1647102794808184 1.2407735180004655 1.066896968460034 1.120731859935927 1.1975490830217683 1.3307028991100398 1.2934517936654022 1.2902999828478579 1.0827655386537738 1.1251968782002477 1.0 12.330192235588541 -8.944584473128513 4.305688279139537 1.0347546797430218 1.2120285018544315 0.38253591849220325 0.0795514303573743 0.133657756034035 4.7790826893964455 0.015137191114986874 0.01573755455144921 1.1360972977904711e-09 8.944584473128513 0.17727382211140963 KIQVLQQQADDAEER ddPTM_A549_MK2206_60min_R1 1 KIQVLQQQADDAEER 15 1 P06753-2;P06753-3;P06753-6;A0A087WWU8;P06753-5;P06753-4;D6R904;Q5VU61 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 106.19 6.0241e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KIQVLQQQADDAEER ddPTM_A549_PD325901_60min_R1 1 KIQVLQQQADDAEER 15 1 P06753-2;P06753-3;P06753-6;A0A087WWU8;P06753-5;P06753-4;D6R904;Q5VU61 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 97.579 1.4409e-05 6993600.0 2449.2 3215.3 3129.9 2936.0 2987.6 3658.1 3413.9 3204.8 3578.2 3198.4 3829.7 False True 2697.8409809942555 3486.264615096332 3342.3138356176705 3117.350051860208 2777.7612826604745 3628.309646439188 3543.817832657762 3140.8777498830373 3427.820697525686 2996.4524781576424 3358.671178468513 0.8032465334175455 1.0379892611833466 0.9951298171265753 0.9281498206328306 0.8270417480782022 1.080281293893624 1.0551249718567783 0.9351548820909628 1.020588356341779 0.8921541642322857 1.0 11.713674844029097 -7.276931112991326 24.99737296665533 1.0119282000102958 0.9297744605649767 0.1776662963163388 0.07951162895045893 876.2412472921307 1413895.4778371898 0.010191763988528947 0.01632788398081599 5.285290794575541e-08 7.276931112991326 -0.08215373944531912 KIRS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 KIRSSPR 7 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KIRS(0.743)S(0.257)PR;KIRS(0.632)S(0.368)PR 62.2 0.0090149 238150000.0 4467.0 5356.0 5613.7 6934.400000000001 4730.9 13649.8 8376.5 7933.5 7269.4 6030.5 8211.9 True False 4920.486551568407 5807.368916883637 5994.679439920412 7362.722138834957 4398.617904718983 13538.64055437676 8695.272291296675 7775.260118789649 6963.892398019454 5649.733200828429 7201.888359523089 0.6832217199065611 0.8063675284836271 0.8323760575923981 1.0223321677986297 0.6107589683617729 1.8798737051338146 1.2073600502011221 1.0796140860068162 0.9669536724782839 0.784479419673003 1.0 12.81415952034541 -6.317412994417294 1.3711120861009627 1.0559549650443896 0.7426124823507921 0.17447767252078217 0.29853341343425815 0.6952922659628994 2.410582681569556 0.04337393148504898 0.1725321565444586 4.814897049063014e-07 6.317412994417294 -0.31334248269359743 KIRS(ph)SPREAK ddPTM_A549_MK2206_60min_R1 1 KIRSSPREAK 10 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KIRS(0.572)S(0.428)PREAK 45.257 0.014122 8989500.0 2244.8 5319.6 1900.1 3053.5 3397.2 3364.8 1541.0 1524.6 4399.1 6548.0 4106.3 True False 2623.667359909255 5590.344918151308 2169.5627515895694 3801.607637076826 2897.476380243629 3720.8609026265294 1820.9797529729108 1740.7167188916808 3402.7108739191776 5068.802252216492 3086.5923818853935 0.8500206814826101 1.8111704515827707 0.7028990171563659 1.231651985985489 0.9387298424140327 1.2054915072244503 0.5899644422308189 0.5639606736242876 1.1024166630777104 1.6422000786253153 1.0 11.59179925661375 -5.784196566047443 24.98928862709817 0.9845232189118406 1.3305967481630738 0.11167042914128167 0.36086271542648235 249.40571723455395 273868.6487775999 0.03854844343967928 0.11996861408983389 1.643627632450212e-06 5.784196566047443 0.34607352925123325 KIS(ph)ENSYSLDDLEIGPGQLSSSTFDSEK ddPTM_A549_PD325901_60min_R1 1 KISENSYSLDDLEIGPGQLSSSTFDSEK 28 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.546)ENS(0.192)YS(0.263)LDDLEIGPGQLSSSTFDSEK 123.16 3.9705e-21 9205000.0 2837.3 1831.9 2113.1 2023.9 2697.0 2513.1 2225.9 2747.6 2720.9 3355.7 2390.7 True False 3125.340607290136 1986.2806420536103 2256.507673102557 2148.9117063896038 2507.5720241448985 2492.6341468156484 2310.607842559216 2692.796962549497 2606.550035184629 3143.8205293126557 2096.6590558959365 1.4906289119833207 0.9473550964178296 1.0762396808184507 1.0249218633552888 1.1959846390348727 1.1888600293911427 1.1020427169890317 1.2843275376495684 1.2431921288560708 1.4994428972474259 1.0 11.033876564141941 -10.963693174690887 1.2653966707294426 1.0011611583759843 1.16902135835448 0.0 0.20160537457443764 0.6316721786025441 1.818610647942993 0.0896481163436698 0.02139876006735633 1.0871934451560451e-11 10.963693174690887 0.16786019997849566 KIS(ph)ENSYSLDDLEIGPGQLSSSTFDSEKNESR ddPTM_A549_PD325901_60min_R1 1 KISENSYSLDDLEIGPGQLSSSTFDSEKNESR 32 2 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.907)ENS(0.042)YS(0.051)LDDLEIGPGQLSSSTFDSEKNESR 104.43 7.0328999999999996e-15 35823000.0 1378.2 1494.2 1723.4 1406.6 1757.5 1742.3 1469.2 1606.8 1645.1 1902.3 1822.7 True False 1518.1138494227835 1620.1214778953558 1840.3602876460882 1493.4824873796208 1634.0592630458507 1728.1112864577237 1525.1112099770892 1574.7511134897843 1575.9621679893528 1782.1884533514503 1598.5194550472772 0.9496999518081463 1.0135137691192126 1.1512905156300761 0.9342910920877407 1.0222329530531253 1.081069911912091 0.9540773527413734 0.9851310276628507 0.9858886377724709 1.1148994450610181 1.0 10.642520587447661 -7.7816764700158245 24.995730690408653 0.9897443630922393 1.0262556162658683 0.0 0.06756302190075157 450.02731792361845 555846.990663861 0.008337780417384847 0.011528590000646134 1.6531928944558004e-08 7.7816764700158245 0.03651125317362891 KIS(ph)ENSYSLDDLEIGPGQLSSSTFDSEKNESRR ddPTM_A549_PD325901_60min_R1 1 KISENSYSLDDLEIGPGQLSSSTFDSEKNESRR 33 3 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.333)ENS(0.333)YS(0.333)LDDLEIGPGQLSSSTFDSEKNESRR 56.239 0.0010912 4241600.0 888.3 821.7 934.61 859.44 1041.5 831.38 995.56 1054.9 984.46 986.73 1125.3 True False 978.4795620681027 890.9475427564009 998.0382548664901 912.5256568701416 968.3486329799447 824.6095169231603 1033.4465805913355 1033.8591919469593 943.086569751868 924.4276994036046 986.8952338644327 0.9914725783370375 0.9027782404700397 1.011290986742761 0.9246428856454412 0.981207122855519 0.8355593264891933 1.047169491886813 1.0475875822184566 0.9556096102105782 0.9367029728006477 1.0 9.946753129971539 KIS(ph)GLK ddPTM_A549_MK2206_60min_R1 1 KISGLK 6 1 O00716;P0DPB6;O00716-2 O00716 E2F3 Transcription factor E2F3 1 KIS(1)GLK 45.081 0.050786000000000005 2398200.0 1426.9 2138.3 2063.7 2141.3 2648.4 2247.0 1850.1 2351.5 3892.7 3276.7 3611.1 True False 1667.7258356443856 2247.130336582251 2356.3636916243336 2665.9185961266107 2258.8238683142663 2484.776048562117 2186.239221917702 2684.832326166724 3011.0096653645483 2536.4911942330154 2714.3642087101125 0.6144075398182848 0.8278661829431155 0.8681088868115073 0.9821521325590556 0.8321742016292196 0.9154173344125041 0.805433263120066 0.9891201473816139 1.109287270920583 0.93446973184132 1.0 11.40639859674048 -8.414005968529688 4.1743497015380955 1.051627160106556 0.8451345217282867 0.4176031435001082 0.09520691401836448 0.13919256225699153 4.165673155789967 0.01527985093886116 0.018475553267945855 3.854730600548001e-09 8.414005968529688 -0.20649263837826937 KIS(ph)GLK ddPTM_A549_PD325901_60min_R1 2 KISGLK 6 1 O00716;P0DPB6;O00716-2 O00716 E2F3 Transcription factor E2F3 1 KIS(1)GLK;KIS(1)GLK 54.157 0.035155 8728700.0 5946.5 5490.8 6628.2 6177.9 7412.6 6707.1 6794.0 6583.3 6787.700000000001 6860.2 7890.0 True False 6550.184302418074 5953.528985964273 7078.029510604505 6559.494851971106 6891.964548081749 6652.4796013319165 7052.549387819448 6451.990917001055 6502.436573862584 6427.045801230944 6919.5800188308685 0.9466158761937105 0.8603887764520974 1.0228987151449125 0.9479614129932986 0.9960090828238177 0.9613993310617021 1.0192163929930311 0.9324252193691926 0.9397154966294089 0.9288202150622512 1.0 12.756468761377096 -5.758326040659653 24.999811694311717 0.9735270135852417 0.9035023368451349 0.3371053163866998 0.03702685986143911 59.861126344542136 480652.8360673324 0.004726257315418701 0.016873763507528675 1.7445119926016582e-06 5.758326040659653 -0.07002467674010682 KIS(ph)GTTALQEALKEK ddPTM_A549_MK2206_60min_R1 2 KISGTTALQEALKEK 15 2 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;Q9UDT6;Q9UDT6-2 J3KP58;Q9UDT6 CLIP1;CLIP2 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 1 KIS(0.995)GT(0.005)TALQEALKEK;KIS(0.96)GT(0.033)T(0.007)ALQEALKEK 113.47 2.6124000000000003e-07 13754600.0 2264.7 2761.3 2667.3 2648.3 4100.9 2840.3 3062.3999999999996 2726.5 4503.8 4400.6 4266.6 True False 2646.9259934009665 2901.8383755341006 3045.563247889513 3297.133618886703 3497.663042429379 3140.85866076145 3618.79843965233 3112.989724556058 3483.6964910907227 3406.5014036505663 3207.085467830459 0.8253369047852562 0.9048210297610643 0.9496358230670375 1.0280778769257934 1.090604873962243 0.97934984654032 1.1283760523227928 0.970660045010258 1.0862499693366097 1.0621798008878787 1.0 11.647047086328188 -5.780624913492142 1.3610738826556017 1.0419304371150517 0.8205231670249599 0.6984725240930325 0.046862432374710744 0.253643670791538 0.7214335570974277 0.006828295399746317 0.05932820941428563 1.6572006177150574e-06 5.780624913492142 -0.22140727009009187 KIS(ph)GTTALQEALKEK ddPTM_A549_PD325901_60min_R1 2 KISGTTALQEALKEK 15 2 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;Q9UDT6;Q9UDT6-2 J3KP58;Q9UDT6 CLIP1;CLIP2 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 1 KIS(0.967)GT(0.032)T(0.002)ALQEALKEK;KIS(0.956)GT(0.036)T(0.007)ALQEALKEK 107.78 8.257700000000001e-07 27335000.0 4639.0 4572.2 4777.6 4825.2 5037.700000000001 6219.8 5968.6 6145.5 6496.5 6008.3 5799.9 True False 5109.947864948698 4957.515340137298 5101.836666042678 5123.241645175707 4683.869331121525 6169.148010968119 6195.73833914324 6022.923181448518 6223.474697187303 5628.934912617105 5086.5490685953255 1.0046001318453484 0.9746323633729025 1.003005494932063 1.0072136484059349 0.9208343943912837 1.2128356431390444 1.2180632203857267 1.1840882885873303 1.2235161036018365 1.1066313991484922 1.0 12.312471487111708 -7.256945021293157 24.991856181953132 1.1306333923781546 0.9842060888897464 0.6193130171074865 0.06669694726157015 336.3559604067294 1870379.0894694217 0.014218089295877565 0.024098342712347717 5.5342016398369546e-08 7.256945021293157 -0.14642730348840827 KIS(ph)ILEEPSK ddPTM_A549_MK2206_60min_R1 2 KISILEEPSK 10 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3;C9JKE4;F8VZ02;F8VT91;C9JGM8;C9JW67;F8W6C2 B8ZZZ7 SPATS2L SPATS2-like protein 1 KIS(1)ILEEPSK;KIS(0.989)ILEEPS(0.011)K 101.62 0.00017571 12101800.0 3475.8 3934.6 4961.9 4827.2 8301.3 7176.7 6795.299999999999 6550.9 9436.8 9277.8 9558.400000000001 True False 4062.4300648488024 4134.854333964609 5665.572031531123 6009.8642167012395 7080.1897666656105 7936.133630492098 8029.918050212083 7479.510136289854 7299.379867473006 7181.938536288059 7184.785481580334 0.5654212050260473 0.5755014320977506 0.7885513138918309 0.8364709332114028 0.9854420545772903 1.1045748896523073 1.117628086572441 1.0410206617114883 1.0159495904486582 0.9996037536124671 1.0 12.810729366984173 -6.1525572424237 1.194268135234256 1.025862710548828 0.538582364045348 0.9294550517804256 0.04949087412641632 0.11231795333560862 0.2720491788081966 0.008238677105084828 0.04502849384063651 7.037894584651143e-07 6.1525572424237 -0.48728034650348007 down KIS(ph)ILEEPSK ddPTM_A549_PD325901_60min_R1 1 KISILEEPSK 10 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3;C9JKE4;F8VZ02;F8VT91;C9JGM8;C9JW67;F8W6C2 B8ZZZ7 SPATS2L SPATS2-like protein 1 KIS(0.556)ILEEPS(0.444)K 89.46600000000001 0.00028536 34477000.0 9179.5 9637.1 9279.7 9121.5 11034.0 10482.0 10002.0 10699.0 8951.4 10641.0 11068.0 True False 10111.396082409256 10449.252238405392 9909.476245369266 9684.914338570468 10259.009905233519 10396.638067296026 10382.631583304414 10485.600051796875 8575.203787332011 9969.125443995574 9706.706165832704 1.0416917860356223 1.0764982538759056 1.0208896896714876 0.9977549719863839 1.0568991921631363 1.0710778599533444 1.0696348901392467 1.0802428622704014 0.8834308611830093 1.0270348430950322 1.0 13.24476610508623 -8.750460673830013 24.999999999038465 0.9449534603125227 1.0512274514743014 0.39138113614134673 0.0422854893818694 124.13966523243815 282682.5210193627 0.00800703005516966 0.009036168343418837 1.7763941167843015e-09 8.750460673830013 0.10627399116177871 KIS(ph)ITER ddPTM_A549_MK2206_60min_R1 1 KISITER 7 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 KIS(0.963)IT(0.037)ER 51.445 0.020804 4692300.0 722.7 877.86 928.46 854.24 1321.8 1024.2 817.28 823.48 1418.0 1217.9 977.74 True False 844.674091681405 922.5393243567761 1060.1295891483887 1063.5288383482905 1127.3649709778722 1132.5801641910632 965.7691969563275 940.2108118017321 1096.8252640806968 942.7755441317154 734.9401737487817 1.1493100008030486 1.255257716626224 1.4424705942265768 1.4470957995443958 1.5339547506668614 1.5410508292314462 1.3140786576275092 1.2793025138439584 1.4924007466975335 1.2827922296352468 1.0 9.521483004963406 -10.855377502470725 0.9544603577308552 0.9851404291547509 1.3948979841317313 0.21640038419497276 0.14373272819334068 0.35848236175331993 0.5440057270722768 0.1061599721898687 0.02232265567685119 1.395155120974479e-11 10.855377502470725 0.4097575549769804 KIS(ph)ITER ddPTM_A549_PD325901_60min_R1 1 KISITER 7 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 KIS(0.943)IT(0.057)ER 57.348 0.014803 3326400.0 1166.1 1025.9 1222.0 989.15 1755.2 1377.7 1388.7 1346.1 1504.5 1455.3 1526.4 True False 1284.4816135625522 1112.3561933963636 1304.9322684829524 1050.2475489773585 1631.92080711128 1366.480467974979 1441.547738425798 1319.2509795049791 1441.2710970396836 1363.4121096369488 1338.6624766468228 0.9595261210129781 0.8309459724176871 0.9748030524853731 0.7845499274829107 1.219068163618832 1.020780437050747 1.0768567608144881 0.9854993342381069 1.0766501057457607 1.0184883295243479 1.0 10.386576537594424 -6.7450900265972065 24.9999995630102 1.0455664131269953 0.8896589082354004 0.5230877125928705 0.07728708700664702 151.38923064527128 231489.91807510977 0.01016563549838859 0.021112629219660645 1.79849805880669e-07 6.7450900265972065 -0.15590750489159488 KIS(ph)LEDIQAFEK ddPTM_A549_PD325901_60min_R1 1 KISLEDIQAFEK 12 1 Q8WXX5 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 1 KIS(1)LEDIQAFEK 61.097 0.003489 2956600.0 719.42 927.02 865.06 963.7 769.09 795.18 891.67 767.79 764.82 746.45 844.61 True False 792.4549887909878 1005.1432287769728 923.7681736283652 1023.225560278502 715.0717716164627 788.7043177210891 925.6029897905456 752.4758261303971 732.6772751331939 699.3190196100464 740.7283244239206 1.069832167424266 1.3569661043523522 1.2471079384561112 1.3813776610666066 0.9653630731248037 1.064768676605529 1.249584981795324 1.0158593931393305 0.9891309012693849 0.9440965014452781 1.0 9.532800694689056 -7.4795325164725055 0.6303334596999123 0.9921212733632018 1.2614816069586532 0.40095488534774415 0.11901473821720365 0.5295369057676446 0.41471924253341813 0.024691410998246587 0.06082979490353551 3.314877497501678e-08 7.4795325164725055 0.2693603335954514 KIS(ph)PPSYAR ddPTM_A549_MK2206_60min_R1 4 KISPPSYAR 9 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 KIS(1)PPSYAR;KIS(0.999)PPS(0.001)YAR;KIS(1)PPSYAR;KIS(1)PPSYAR 136.61 1.8567e-05 325069000.0 39340.5 44438.8 39139.6 37468.4 53918.7 41935.4 37961.3 39706.4 58147.0 59158.0 59021.0 True False 45980.214617119556 46700.54510653855 44690.183817754434 46648.1596820204 45987.33065566996 46372.97619353439 44858.37683097372 45334.90379575013 44976.79734167859 45794.16671298466 44364.456803267596 1.03642009685855 1.0526567543389576 1.0073420715130417 1.0514759571807628 1.0365804964005068 1.0452731653894354 1.011133237354768 1.021874425213543 1.0138025027811428 1.0322264716562868 1.0 15.437116683845193 -8.49734796289475 0.5750287247848581 1.0026006384467219 1.0391104270920366 0.20434701940621836 0.015575907175052554 0.3774732625701352 0.27306341068192486 0.003708248121508818 0.004393829332028508 3.1816473193033226e-09 8.49734796289475 0.036509788645314734 KIS(ph)PPSYAR ddPTM_A549_PD325901_60min_R1 3 KISPPSYAR 9 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 KIS(0.996)PPS(0.004)YAR;KIS(0.999)PPS(0.001)YAR;KIS(0.947)PPS(0.051)Y(0.001)AR 152.38 7.9311e-06 532408900.0 37984.2 38642.2 40170.7 38961.6 45600.5 42819.7 44183.5 43038.9 43050.8 45173.1 47741.0 True False 41840.32802150988 41898.713808812674 42896.92526804262 41368.1695437863 42397.678193184816 42470.99056002628 45864.9272706389 42180.45537613611 41241.52458918976 42320.86275671051 41869.1596551336 0.9993113873347066 1.000705869282367 1.024547080031567 0.9880343881875386 1.012623098777346 1.014374086077911 1.095434626546544 1.0074349646271046 0.9850096091941295 1.0107884444134414 1.0 15.353600341966384 -8.525782110456811 24.84526935182778 0.9930949423496288 1.0195802020055664 0.09421604883278578 0.02703933940524021 111.69887372954722 955834.8654108876 0.0045715890456288644 0.005200752913090704 2.9800111534931447e-09 8.525782110456811 0.02648525965593762 KIS(ph)SDLDGHPVPK ddPTM_A549_MK2206_60min_R1 1 KISSDLDGHPVPK 13 1 P29401;P29401-2;E9PFF2;F8W888 P29401 TKT Transketolase 1 KIS(0.5)S(0.5)DLDGHPVPK 46.926 0.007855 3037500.0 662.04 813.49 533.84 671.13 1004.3 626.19 700.35 716.79 898.82 1036.3 889.17 True False 773.7761666760165 854.8931663032757 609.5465392919192 835.5568801281707 856.5688003881651 692.4530101687193 827.5945295227629 818.3971775773103 695.238705120601 802.1991102583925 668.3645491564262 1.1577157520587158 1.2790821526699403 0.9119971130444547 1.2501514049223075 1.281589218741898 1.0360409016945862 1.2382382197968282 1.2244772386719902 1.0402088291458516 1.2002418609288674 1.0 9.384491402957511 -8.861388016211095 5.762801625145937 1.0176326121982924 1.170932958919724 0.04359887815559382 0.11942146349999287 0.18202841935749295 8.844802416436572 0.01766809764348637 0.018738185556200163 1.3759795638981616e-09 8.861388016211095 0.15330034672143156 KIS(ph)SPTGSK ddPTM_A549_MK2206_60min_R1 2 KISSPTGSK 9 1 Q99623;F5GWA7;F5GY37;J3KPX7;Q99623-2 Q99623 PHB2 Prohibitin-2 1 KIS(0.49)S(0.49)PT(0.02)GSK;KIS(0.873)S(0.105)PT(0.022)GSK 77.185 0.0008085000000000001 28378000.0 10406.6 11212.5 11164.7 10459.5 14828.5 11942.4 11236.8 10717.099999999999 17135.2 16966.3 16202.2 True False 12162.979663057575 11783.168357540333 12748.022342335704 13022.077969544798 12647.247293195176 13206.136841276457 13278.381108504864 12236.281744742239 13254.104559291642 13133.6010463929 12178.746582028476 0.9987053742464624 0.9675189707065687 1.046743378431675 1.0692461561488422 1.0384687133451025 1.084359277231702 1.0902912725106753 1.0047242269412735 1.0882979188392026 1.0784033445423236 1.0 13.572078040466748 -5.77079184516071 24.64284079663674 1.0479658596745582 0.983112173296503 0.4262304663583244 0.03143599233725979 128.12060653595904 337590.4289980516 0.005119300824229262 0.016237425859407698 1.6951500814239675e-06 5.77079184516071 -0.06485368637805522 KIS(ph)SPTGSK ddPTM_A549_PD325901_60min_R1 1 KISSPTGSK 9 1 Q99623;F5GWA7;F5GY37;J3KPX7;Q99623-2 Q99623 PHB2 Prohibitin-2 1 KIS(0.496)S(0.496)PT(0.006)GS(0.001)K 45.358999999999995 0.03845 1296200.0 917.12 580.44 546.38 595.66 889.55 679.52 882.39 691.07 770.41 863.06 952.85 True False 1010.2253472519401 629.3557158543575 583.4606324498485 632.4525653579873 827.071076780902 673.9862144141377 915.9698343123358 677.2860667160726 738.0323468729428 808.5662443092586 835.6554906138133 1.2089017048280268 0.7531282004646166 0.6982071427799507 0.7568340930703782 0.9897273291095045 0.8065359732382962 1.0961093950804168 0.8104847922659926 0.8831777630406479 0.9675832366222391 1.0 9.706764485644678 -6.770676904991509 24.996597578281946 0.9369019668454567 0.8358963343241673 0.061545246071502024 0.1477454390766204 355.7696085686132 962709.3256082095 0.02040585573293712 0.03894380790332669 1.6955987784045097e-07 6.770676904991509 -0.10100563252128936 KIS(ph)TEDINK ddPTM_A549_MK2206_60min_R1 2 KISTEDINK 9 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 KIS(0.972)T(0.028)EDINK;KIS(0.889)T(0.111)EDINK 66.498 0.0022339 8206000.0 3534.7 3631.7 3763.7 3262.8999999999996 4951.4 3535.1 3051.3999999999996 3514.8 4889.8 4573.5 5049.1 True False 4131.270944882055 3816.538017755115 4297.449254332756 4062.3106464771463 4223.055619079919 3909.181935590537 3605.799882038635 4013.03366362356 3782.26810740606 3540.3431735663 3795.269121929117 1.0885317515460273 1.0056040547172547 1.132317397336077 1.070361683445598 1.112715721443585 1.030014423220538 0.950077521829552 1.05737789197509 0.996574415646064 0.9328306003677443 1.0 11.889986475205713 -7.492317280203131 7.638462036970353 0.9999531890336123 1.0791478726570356 0.5205082159029604 0.04246120020451099 0.1385620574362137 29.261092426379232 0.005148036520604668 0.008122894290269356 3.2187164516104164e-08 7.492317280203131 0.0791946836234233 KIS(ph)TEDINK ddPTM_A549_PD325901_60min_R1 1 KISTEDINK 9 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 KIS(0.986)T(0.014)EDINK 73.848 0.00092006 5479300.0 2105.2 2232.2 2102.4 2082.2 2485.0 2449.2 2493.7 2585.9 2718.4 2490.9 3006.8 True False 2318.918354233669 2420.3153279065796 2245.0815067582316 2210.812764980695 2310.462172784602 2429.254527229672 2588.599118105 2534.3221959006933 2604.155101490644 2333.6241489003455 2636.9826616756213 0.8793832390085401 0.9178351314485456 0.851382733526066 0.8383872966293512 0.8761764748640638 0.9212250662604082 0.9816519295808047 0.9610689644391919 0.9875510898641565 0.8849599896183951 1.0 11.364672370086467 -7.608198923712797 1.8873545162003045 0.9914588203721711 0.8713658348765747 0.5061265854080288 0.03824972324928545 0.08567933147905829 0.6182543523146196 0.003559788491058338 0.0057675285439801206 2.4649100542428564e-08 7.608198923712797 -0.12009298549559644 KIS(ph)VVSATK ddPTM_A549_MK2206_60min_R1 1 KISVVSATK 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KIS(0.864)VVS(0.136)ATK 84.365 0.00056844 6210200.0 2843.8 2995.4 2706.2 2454.6 3984.1 2672.7 2765.4 3012.2 4149.7 4614.6 3919.4 True False 3323.763915765295 3147.853065612155 3089.9798528244273 3055.97711019118 3398.0441677053573 2955.523340005325 3267.837384082599 3439.1885744756123 3209.7995757092144 3572.158655021112 2946.1048100629773 1.1281892974113996 1.0684796599428739 1.0488356837373938 1.0372940907441288 1.153402335211801 1.0031969432690164 1.1092060855814372 1.1673680320973017 1.0895062404927136 1.2125022310203388 1.0 11.524593040992526 -10.51591065592659 0.9598740761035107 1.0028649271613952 1.0873652414248682 0.0 0.07817981760018844 0.48823525058067413 0.8433807226053299 0.026015172528472148 0.00847457955911384 3.048522074192106e-11 10.51591065592659 0.08450031426347304 KIS(ph)VVSATK ddPTM_A549_PD325901_60min_R1 1 KISVVSATK 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KIS(0.82)VVS(0.176)AT(0.003)K 102.73 0.00028449 14731000.0 5209.8 5938.7 5422.6 5228.1 6189.3 5737.7 6402.6 5278.2 6746.1 6015.3 5851.3 True False 5738.695060747949 6439.175090869465 5790.61024474276 5551.027863123419 5754.584919925847 5690.974073528369 6646.254446637152 5172.922160332201 6462.584877194684 5635.49293142248 5131.627194446775 1.118299292465773 1.2548018098114495 1.1284160024346874 1.0817285926636488 1.1213957487311645 1.1089999054660273 1.2951553561469626 1.0080471484620148 1.259363673999587 1.0981882973729982 1.0 12.325200649115557 -11.064382985507578 1.3717328682111691 0.9998800822882703 1.164004187509972 0.13785792711852762 0.08636906754874818 0.3857233747845727 1.2935076647145693 0.05815421347982939 0.012837628581313858 8.622178597931023e-12 11.064382985507578 0.16412410522170173 KIS(ph)YSR ddPTM_A549_PD325901_60min_R1 1 KISYSR 6 1 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 KIS(0.948)YS(0.052)R 69.812 0.021592 5333900.0 1412.6 1560.9 1072.3 1178.7 1688.2 1263.7 1200.2 2220.8 4715.9 9379.0 9360.7 True False 1556.0061120988432 1692.442520979027 1145.0727262637222 1251.5056219780745 1569.6266559738294 1253.4088461783995 1245.8742677746409 2176.5044018161034 4517.7071229840085 8786.80833936985 8209.3932423663 0.18953972189671056 0.2061592703641996 0.13948323493072956 0.15244800499011507 0.19119886325745017 0.15267983993139952 0.15176204026200682 0.2651236623169414 0.5503095039557164 1.070335904244869 1.0 13.003059880772646 -9.378948762644237 0.6263267564018421 0.9591343914904602 0.14574078707865454 0.957470164261235 0.06861195865598643 0.09086904931488732 0.07937145720859361 0.028990629701939913 0.01851330138547885 4.1787966450086036e-10 9.378948762644237 -0.8133936044118056 KISENS(ph)YSLDDLEIGPGQLSSSTFDSEK ddPTM_A549_MK2206_60min_R1 1 KISENSYSLDDLEIGPGQLSSSTFDSEK 28 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.285)ENS(0.357)YS(0.357)LDDLEIGPGQLSSSTFDSEK 103.99 5.2238999999999995e-15 1601300.0 340.23 575.88 529.87 484.88 1155.4 1011.6 771.82 977.71 1150.7 571.42 709.12 True False 397.6525061751271 605.1898322176429 605.013533595477 603.6756217670907 985.4421905491255 1118.6468405542669 912.0497034000987 1116.303386611298 890.0682872903092 442.33582513157427 533.0259332836298 0.7460284412907378 1.1353853432411023 1.1350545926881606 1.1325445612903553 1.8487696920831793 2.0986724485673776 1.711079417433871 2.094275938385345 1.6698404931391821 0.8298579815931804 1.0 9.058061915835209 -6.5883913137469365 8.947752080998338 1.5041933266561407 1.0374610353799492 0.3090491594385094 0.3935421443325509 0.3853207083965152 48.58306833796502 0.06342545355329332 0.13225021657835137 2.5799345363740084e-07 6.5883913137469365 -0.46673229127619154 KISILEEPS(ph)K ddPTM_A549_PD325901_60min_R1 1 KISILEEPSK 10 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3;C9JKE4;F8VZ02;F8VT91;C9JGM8;C9JW67;F8W6C2 B8ZZZ7 SPATS2L SPATS2-like protein 1 KIS(0.099)ILEEPS(0.901)K 91.584 0.00026682 30086000.0 6702.4 6618.3 7931.4 7589.3 9667.6 8132.4 8521.1 7508.6 7860.4 8866.1 9021.1 True False 7382.8227139538985 7176.047367925872 8469.672499382717 8058.073824449139 8988.581127409427 8066.172430688627 8845.375123424832 7358.835082617255 7530.054723277313 8306.29293290191 7911.561889464529 0.9331687999287817 0.9070329560945345 1.0705436698487312 1.0185187118588699 1.1361323153370153 1.0195423537582367 1.1180314642047888 0.9301368282812379 0.9517785272342683 1.0498929350427033 1.0 12.949746822311559 -14.068331728364637 10.674406841260643 1.1567779446861843 0.9960481336402514 0.0 0.07520063565341112 0.0 0.0 0.0 0.00982895603415167 8.544138342708112e-15 14.068331728364637 -0.16072981104593298 KISLPGQMAGT(ph)PITPLK ddPTM_A549_PD325901_60min_R1 2 KISLPGQMAGTPITPLK 17 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 KISLPGQMAGT(1)PITPLK;KISLPGQMAGT(1)PITPLK 122.01 2.1097999999999998e-10 9565300.0 5367.8 5794.5 5870.6 5587.5 7800.9 6107.1 6048.9 6425.0 5833.8 6235.5 6378.299999999999 True False 5912.735104434498 6282.822850799517 6269.014218785613 5932.62718486679 7252.991695644021 6057.365802402552 6279.094199585088 6296.848334685004 5588.625673585974 5841.78946584291 5593.809535375018 1.0570140200596048 1.1231742538009577 1.1207056978148127 1.060570108322263 1.2966104136682532 1.0828695121090597 1.1225076863765844 1.1256815761895358 0.9990732859679506 1.0443311358564638 1.0 12.449615416730047 -8.761256458655826 22.571325578873427 0.9995623698368261 1.1257946025646586 0.37563872789958264 0.061831046324193346 0.8444647956861262 104149.15450658549 0.009760143430668163 0.010728753488143884 1.7327804577358186e-09 8.761256458655826 0.12623223272783246 KISS(ph)PTGSK ddPTM_A549_PD325901_60min_R1 2 KISSPTGSK 9 1 Q99623;F5GWA7;F5GY37;J3KPX7;Q99623-2 Q99623 PHB2 Prohibitin-2 1 KIS(0.353)S(0.638)PT(0.009)GSK;KIS(0.345)S(0.569)PT(0.086)GSK 84.71799999999999 0.00055665 36288000.0 8825.3 9759.2 8700.8 8267.7 10374.8 10088.7 9669.0 10517.0 10533.9 9762.5 9678.0 True False 9721.237959157515 10581.642033915372 9291.288610160778 8778.377051690948 9646.10983911698 10006.540972097822 10036.959086079814 10307.230184573109 10091.19681562401 9146.094083921333 8487.667353896719 1.145336822689506 1.2467079107497423 1.0946810498994302 1.034250835438404 1.1364853777744266 1.1789506533268865 1.182534454707607 1.214377255235035 1.1889246355762404 1.077574521075255 1.0 13.051152400353073 -10.758023810486739 1.0038013243063324 0.9998152297487592 1.1585280733635719 0.3564166966023866 0.058885681877383356 0.3646819281074986 0.6515099678847242 0.040990091897061716 0.0104023014068606 1.7457264396718847e-11 10.758023810486739 0.15871284361481264 KISSIQSIVPALEIANAHR ddPTM_A549_PD325901_60min_R1 1 KISSIQSIVPALEIANAHR 19 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 88.264 1.9813e-06 3841100.0 582.71 800.14 486.37 646.47 634.08 409.69 492.66 685.35 932.3 495.29 903.22 False True 641.8662902315705 867.5706058915738 519.3779929804036 686.4009836601045 589.5444082572477 406.35362047228654 511.40844589389616 671.6801566033262 893.1186731605821 464.0173048732797 792.1296659833225 0.8103045723388983 1.095238119651284 0.65567294760469 0.8665260412990972 0.744252404087666 0.5129887667669322 0.6456120353213275 0.8479421809932159 1.127490499995219 0.5857845309924917 1.0 9.62959279831116 -8.622868634552033 4.906489665058342 1.059599031633793 0.7630194601404965 0.0 0.20112203454116492 0.142235833891598 5.728134641846373 0.02555451502304873 0.028997209809916564 2.383040182638184e-09 8.622868634552033 -0.2965795714932966 KISSPTGSK ddPTM_A549_PD325901_60min_R1 1 KISSPTGSK 9 1 Q99623;F5GWA7;F5GY37;J3KPX7;Q99623-2 Q99623 PHB2 Prohibitin-2 0 66.595 0.0053509 3715900.0 4936.1 5302.7 5398.8 5457.1 6065.0 5860.0 5234.8 5248.9 5641.3 6146.6 5562.5 False True 5437.209238235235 5749.577138827268 5765.195033621735 5794.172673026681 5639.01532311413 5812.278102876808 5434.013178592472 5144.206571817611 5404.215779149193 5758.502627014682 4878.347763592738 1.1145595807689843 1.1785910758016354 1.1817925480113505 1.1877326000144501 1.1559272926785331 1.1914439856571974 1.113904428697495 1.0544977154373834 1.107796336185998 1.180420688740267 1.0 12.25217689210476 -9.64660010327192 0.3126919251022295 0.9754885602633016 1.18073200435991 0.0 0.0611285631989422 0.6520651750561892 0.14511252745759684 0.04972822631351037 0.02046290167868907 2.2563158630933585e-10 9.64660010327192 0.20524344409660855 KIST(ph)EDINK ddPTM_A549_PD325901_60min_R1 1 KISTEDINK 9 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 KIS(0.366)T(0.634)EDINK 75.819 0.001261 4808600.0 2435.3 2422.0 2444.0 2242.7 2861.9 2625.2 2847.1 2703.3 3193.0 2711.9 3296.9 True False 2682.5298632268955 2626.11044000974 2609.864536965905 2381.2264854587484 2660.890017019015 2603.8212415822854 2955.4479484928984 2649.380560802174 3058.8093139566013 2540.6701711842516 2891.402200771038 0.9277608844980323 0.9082480601659105 0.9026293665647563 0.8235542204483889 0.9202766797055928 0.9005392749884243 1.0221504112104436 0.9162961002435686 1.0578982450594114 0.8786982905756735 1.0 11.497553589671679 -7.936348418365356 1.1609382031433797 1.0241705991030057 0.8915721175852402 0.09295395563139941 0.06160039738388413 0.21156874739204096 0.5722217876446872 0.007958698174711178 0.012085166101786953 1.1578480848431052e-08 7.936348418365356 -0.13259848151776543 KISVVS(ph)ATK ddPTM_A549_MK2206_60min_R1 1 KISVVSATK 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KIS(0.462)VVS(0.474)AT(0.064)K 73.985 0.00091548 6051100.0 3358.5 3617.0 3826.3 3558.5 5025.7 3275.8 3346.4 2939.9 4872.1 5352.9 3702.3 True False 3925.3326925584615 3801.0898505438913 4368.9268756419 4430.332659747133 4286.426187504533 3622.442981699947 3954.3975634967846 3356.6398280661488 3768.577129144965 4143.676172249491 2782.916731718162 1.4105102922482975 1.3658654631024887 1.569909306249541 1.5919745672777867 1.5402639032099643 1.3016713509295208 1.4209543240826163 1.2061589158629884 1.3541824971594678 1.488968794869835 1.0 11.442382026772325 -10.905654144024568 0.2512549331076904 0.7373213232751105 1.5139802017425092 0.0 0.17280625637307795 2.1691191396464746 0.16700692062495703 0.5137778175014642 0.07320601056565383 1.242641507145881e-11 10.905654144024568 0.7766588784673988 KISVVS(ph)ATK ddPTM_A549_PD325901_60min_R1 1 KISVVSATK 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KIS(0.068)VVS(0.921)AT(0.011)K 82.85 0.00061908 16716000.0 2906.9 2590.0 3153.4 2808.9 3476.8 3156.0 3008.6 3347.3 3582.8 3154.2 3205.0 True False 3202.006348053326 2808.268389605791 3367.4086869346484 2982.3993735252493 3232.6015623088556 3130.2985823684644 3123.093919369089 3280.535475593948 3432.2273755226142 2955.0432737008614 2810.805318168938 1.139177561446778 0.9990974371128629 1.1980227393081433 1.0610480043733852 1.1500624185579282 1.113666094956607 1.1111028925345805 1.1671158633394823 1.2210832793494548 1.0513155267636556 1.0 11.456767817982378 -4.9094627532179 20.868470038024984 1.1108960386776854 3.333258965414913 0.014159544278312008 0.07088159344566763 4677.744134268527 1122813.827730893 0.011542895562162026 20404.573753551995 1.2317916244417975e-05 4.9094627532179 2.222362926737228 KIT(ph)LSSQSASSSSEEGYLER ddPTM_A549_PD325901_60min_R1 1 KITLSSQSASSSSEEGYLER 20 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A5PLL3 A0A3B3IS53 KAT6A;MYST3 Histone acetyltransferase KAT6A;Histone acetyltransferase 1 KIT(0.989)LS(0.01)S(0.001)QSASSSSEEGYLER 89.197 2.7042000000000003e-06 4395500.0 1872.3 1899.9 1689.3 2637.9 2335.3 2405.7 2072.3 2557.8 1806.1 2475.0 2864.5 True False 2062.37451768559 2060.011240699631 1803.9460565861298 2800.837091894427 2171.276584347638 2386.1087768072944 2151.162510506073 2506.782672444718 1730.195897881935 2318.728077613857 2512.1846595615984 0.8209486153161588 0.8200078894913416 0.7180786052968481 1.114900961294462 0.8642981621926422 0.9498142454319797 0.8562915557654398 0.9978496854933335 0.6887216237455537 0.9229926903615828 1.0 11.294726798908473 KITSLSS(ph)SLDTSLDFSKENK ddPTM_A549_MK2206_60min_R1 1 KITSLSSSLDTSLDFSKENK 20 2 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 KIT(0.001)S(0.003)LS(0.076)S(0.509)S(0.411)LDTSLDFSKENK 69.619 0.00020780000000000004 3519800.0 1131.3 1590.8 1741.7 1278.2 2261.7 2009.0 2207.5 1695.8 2649.4 2719.4 2917.9 True False 1322.2357823705188 1671.7649251438268 1988.699249746622 1591.3590573805784 1929.0069260558732 2221.591046533729 2608.574175657171 1936.1848431696922 2049.3151302224237 2105.0856512946757 2193.3049000568367 0.6028508769283535 0.7622127343537622 0.9067135397796664 0.7255530488895275 0.8794978418212103 1.012896586551263 1.189334950917938 0.882770490833043 0.9343503177188536 0.9597779365924569 1.0 11.098890665403172 -6.984337908997361 3.6252763698968913 0.9817322771696552 0.76210626891263 0.578991963378885 0.09772295090291955 0.14282624369915461 4.060946114582294 0.014487842247804372 0.027626100547054753 1.0367214660503956e-07 6.984337908997361 -0.21962600825702516 KITSLSS(ph)SLDTSLDFSKENK ddPTM_A549_PD325901_60min_R1 1 KITSLSSSLDTSLDFSKENK 20 2 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 KITSLS(0.002)S(0.499)S(0.499)LDTSLDFSKENK 122.41 3.2586999999999995e-15 12287000.0 2814.9 2747.1 2726.9 3146.5 3302.7 3697.8 3007.5 3452.7 3005.4 3124.0 2786.5 True False 3100.6665757801447 2978.6077579482894 2911.9638321818024 3340.852158780021 3070.7297456964607 3667.6863428016804 3121.952058267149 3383.8331899092486 2879.093489560028 2926.750106854825 2443.77816507886 1.2688003437006268 1.218853577019406 1.1915827196564848 1.3670848714994606 1.2565501196371354 1.5008262186855756 1.277510415175677 1.384672814522857 1.1781320950901941 1.1976332994039904 1.0 11.25489761455438 -9.49472276440529 0.9785891858939543 1.0342775592025906 1.3056640306944884 0.35102588629345755 0.10012992071301148 0.22102989384784763 0.44518664667007335 0.02601321042779571 0.01866713929734906 3.200937803643832e-10 9.49472276440529 0.2713864714918979 KITSLSSS(ph)LDTSLDFSK ddPTM_A549_MK2206_60min_R1 2 KITSLSSSLDTSLDFSK 17 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 KITSLS(0.011)S(0.084)S(0.905)LDTSLDFSK;KITSLS(0.009)S(0.107)S(0.884)LDTSLDFSK 152.32 2.0182e-17 13569300.0 3846.0 4812.8 4044.2 4036.2999999999997 5762.2 4796.5 4336.2 4712.0 7009.099999999999 7148.3 7876.5 True False 4495.110774327777 5057.750962869131 4617.728372179643 5025.19368119639 4914.588013140186 5304.062446340982 5124.03141131806 5379.940429894789 5421.550041232727 5533.494065290037 5920.5476696588885 0.7592390138777081 0.8542707947085126 0.779949529980846 0.848771762610589 0.8300901010097499 0.8958736154634449 0.865465780738031 0.9086896567804772 0.9157176571715855 0.9346253715087219 1.0 12.53151492061014 -5.386157011130459 0.06745452913614092 1.2226595962752345 0.3747997333688747 0.7751277348966122 0.03131677616744525 19.501031245392756 0.2040353577564122 0.7654934241146123 2.033724612458045 4.110011044003119e-06 5.386157011130459 -0.8478598629063598 KITSLSSS(ph)LDTSLDFSK ddPTM_A549_PD325901_60min_R1 2 KITSLSSSLDTSLDFSK 17 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 KITSLSS(0.157)S(0.843)LDTSLDFSK;KITSLS(0.004)S(0.143)S(0.853)LDTSLDFSK 180.86 9.2786e-33 34129000.0 9708.0 9855.9 9605.5 10133.2 11538.3 10838.6 10592.7 11483.9 11671.0 11539.2 12489.0 True False 10693.549013348123 10686.49128228406 10257.386992563823 10759.104749833063 10727.889612974071 10750.334035126376 10995.810995047848 11254.844605554734 11180.50845699577 10810.612942707803 10952.93217429387 0.9763183815239439 0.9756740124224327 0.936496896843526 0.9823036040599509 0.9794536697809592 0.9815028399753096 1.0039148257353965 1.0275645303427918 1.0207776583549029 0.987006289336833 1.0 13.419029520337649 -7.554114764655601 1.58220760790179 1.0115779716980904 0.9676860044064526 0.5885227759706738 0.015137672792729012 0.1730670451465713 0.8696223931914773 0.0023576546265838033 0.004016209390112375 2.7918059939832604e-08 7.554114764655601 -0.0438919672916378 KITSLSSS(ph)LDTSLDFSKENK ddPTM_A549_MK2206_60min_R1 1 KITSLSSSLDTSLDFSKENK 20 2 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 KIT(0.001)S(0.002)LS(0.071)S(0.407)S(0.52)LDTSLDFSKENK 78.758 5.2646000000000004e-05 6063500.0 1148.7 1926.2 1768.3 1796.9 2829.4 2240.8 2188.8 1297.8 3082.5 3036.0 3223.9 True False 1342.5724769813623 2024.2353525345986 2019.0715297278223 2237.1405806659054 2413.1990080835167 2477.9199686773422 2586.4766277138906 1481.767124345811 2384.3186717410063 2350.1654914064266 2423.316654886472 0.5540227168719969 0.835316073305092 0.8331851826530744 0.9231730307117918 0.995824876298129 1.0225324716358326 1.0673292004569095 0.6114624439847417 0.9839071864311135 0.9698136174929758 1.0 11.24276721878922 -4.809027404462821 0.847839335318973 0.9704975103721388 1.5346950837657076e-15 0.47243404902729946 0.11697022254938566 2.670675754683579 0.8316776436406155 0.01772056784307986 2.899847011197601 1.552289055708915e-05 4.809027404462821 -0.9704975103721373 KITSLSSS(ph)LDTSLDFSKENK ddPTM_A549_PD325901_60min_R1 1 KITSLSSSLDTSLDFSKENK 20 2 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 KITSLSS(0.024)S(0.976)LDTSLDFSKENK 128.97 2.1558000000000002e-17 16207000.0 2487.3 2186.7 2828.2 2967.9 3261.0 4177.4 3791.9 3636.0 3733.3 3360.1 3226.6 True False 2739.8088649465176 2370.980883224316 3020.138659348186 3151.220442410049 3031.958609839269 4143.380639412557 3936.202829507296 3563.477127613182 3576.4023839004653 3147.942712561745 2829.748655102618 0.9682163325728874 0.8378768478072958 1.0672815954527466 1.1136043608423494 1.0714586273844586 1.4642221428186528 1.3910079336585295 1.2592910402793198 1.263858674321296 1.112446049540604 1.0 11.46645819986036 -6.102805202846022 1.6939348082830883 1.1793835326382887 0.8999850303602619 0.4215043149114066 0.13557784304755802 0.3902196399907351 2.0801099954725557 0.02423927852874725 0.10334384667733897 7.892140299526607e-07 6.102805202846022 -0.27939850227802676 KIVDQIRPDR ddPTM_A549_MK2206_60min_R1 2 KIVDQIRPDR 10 2 P17844-2;P17844;J3KTA4;J3KRZ1;J3QSF1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 P17844-2;A0A1X7SBZ2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 0 ; 56.225 0.0052019 5827700.0 2107.2 2201.9 1824.74 1805.96 2861.6 2406.2 2079.33 1917.52 3029.7 3044.3 2566.5 False True 2462.8438439062643 2313.9673049246885 2083.515570409742 2248.420281072626 2440.6624307385982 2660.8224868937073 2457.117345716522 2189.3343321587126 2343.4777874367314 2356.590515641825 1929.1672182034577 1.2766357528093364 1.1994643507780405 1.0800077622872017 1.1654875014756232 1.2651378313443828 1.3792596420810042 1.2736673744667502 1.1348598045313751 1.2147613567781343 1.2215584493688454 1.0 10.913762484771315 -10.554168833050324 0.6452471557885859 0.9828640838021095 1.2234903715212795 0.0 0.09956236750153888 0.6143296529951149 0.41044898839738087 0.08108710000584332 0.01739049052393596 2.791458443924876e-11 10.554168833050324 0.24062628771916994 KIVDQIRPDR ddPTM_A549_PD325901_60min_R1 2 KIVDQIRPDR 10 2 P17844-2;P17844;J3KTA4;J3KRZ1;J3QSF1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 P17844-2;A0A1X7SBZ2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 0 ; 91.855 0.00021065 7448200.0 2618.6 2440.3 1768.6000000000001 2617.3999999999996 2985.4 2721.8 2229.4 2543.3 3010.2 3066.8 2813.2 False True 2884.438344288568 2645.9526452335963 1888.627831455767 2779.070853453305 2775.715803070886 2699.634563209914 2314.2410369744916 2492.571886319748 2883.6917622524784 2873.161724616637 2467.1942343441046 1.169116847038752 1.0724541296348375 0.7654962082698983 1.1264094309105386 1.1250495661963156 1.0942124157191064 0.9380052063836494 1.0102860373222255 1.1688142433662496 1.1645462220287888 1.0 11.26865558355682 KIVEPEVVGES(ph)DSEVEGDAWR ddPTM_A549_PD325901_60min_R1 1 KIVEPEVVGESDSEVEGDAWR 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 KIVEPEVVGES(0.994)DS(0.006)EVEGDAWR 162.47 3.7976999999999997e-28 11194000.0 1989.2 1666.0 2129.6 2082.2 1957.5 1946.5 1979.8 1757.7 2419.7 2483.9 2315.1 True False 2191.1421196283563 1806.3996668275095 2274.1274623251174 2210.812764980695 1820.0119530083932 1930.6483493600174 2055.142372388129 1722.6412946110245 2318.0084237334117 2327.066130094973 2030.3573766280517 1.0791903656228887 0.8896954238802611 1.120062649316403 1.0888786331066196 0.8963998032853738 0.9508908981168489 1.0122072084675258 0.8484424044952757 1.1416750816465036 1.1461362205897392 1.0 10.98751797271813 -8.79981844565784 24.99995764736109 1.066902078818571 0.9871807868257764 0.20705820164855504 0.09132711603105069 243.21348401542033 158427.16556663834 0.016181468020471716 0.017226635766430447 1.585555886569027e-09 8.79981844565784 -0.07972129199279465 KKAEPSEVDMNS(ph)PK ddPTM_A549_MK2206_60min_R1 12 KKAEPSEVDMNSPK 14 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPS(0.001)EVDMNS(0.999)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK 149.09 5.1404999999999997e-14 2477245800.0 31009.579999999998 36875.77 34085.280000000006 30569.81 45425.909999999996 33878.24 32750.520000000004 34394.689999999995 49959.200000000004 46242.799999999996 51513.40000000001 True False 36243.23899255828 38752.5891838515 38919.08524051414 38059.4148223309 38743.81881433911 37463.21287024435 38700.86555440255 39270.24263682045 38643.52096844876 35796.519362980594 38721.20108248666 0.9360050303024009 1.0008106179686413 1.005110486051451 0.9829089428619228 1.0005841175175394 0.9675116427932478 0.9994748218672044 1.0141793523698859 0.9979938609375154 0.924468207655137 1.0 15.240836083424156 -7.953352496578755 24.973350437580958 1.0004781518510772 0.9847996970616767 0.0 0.029500434181445552 174.88091691691628 93624.21581362658 0.00271348503074086 0.003749218296665012 1.1133904796199295e-08 7.953352496578755 -0.015678454789400553 KKAEPSEVDMNS(ph)PK ddPTM_A549_PD325901_60min_R1 20 KKAEPSEVDMNSPK 14 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPS(0.052)EVDMNS(0.948)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPS(0.001)EVDMNS(0.999)PK;KKAEPS(0.001)EVDMNS(0.999)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK 155.2 1.3133e-19 4344035900.0 51999.72 50325.450000000004 51864.18999999998 50273.079999999994 62691.91 56319.11 57245.77999999999 58385.320000000014 54062.40000000001 56273.84 58653.89 True False 57278.69329422939 54566.55228868212 55384.0058181103 53378.33397315134 58288.64651694841 55860.46584070141 59424.29948399277 57220.77899020251 51790.34533506024 52720.700138646374 51439.83336764302 1.113508531119371 1.0607840017422352 1.0766754515372958 1.0376848150275637 1.1331422110246079 1.0859379236605202 1.1552195175144597 1.1123826661965017 1.0068140183291827 1.0249002900504933 1.0 15.650598348808147 -8.769200407909933 24.716128532279843 1.003217719151393 1.0958483100883973 0.5924336433013588 0.03172721508674643 67.31432752070432 214371.7748336783 0.005458615226228945 0.005864581816804664 1.7013732178881934e-09 8.769200407909933 0.09263059093700443 KKAEPSEVDMNS(ph)PKSK ddPTM_A549_MK2206_60min_R1 4 KKAEPSEVDMNSPKSK 16 3 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKAEPS(0.004)EVDMNS(0.919)PKS(0.077)K;KKAEPS(0.002)EVDMNS(0.981)PKS(0.017)K;KKAEPSEVDMNS(0.999)PKS(0.001)K;KKAEPSEVDMNS(0.974)PKS(0.026)K 94.384 1.1901e-06 25754600.0 3307.2 4551.1 3838.6600000000003 3353.77 4476.2 3193.8199999999997 3036.04 2594.6099999999997 5319.5 7540.3 6749.299999999999 True False 3865.3745067230443 4782.731550680206 4383.03970949783 4175.443800556457 3817.756909586283 3531.7879125138634 3587.649168861698 2962.4039131598734 4114.641743495957 5836.940993034215 5073.262538796258 0.7619109945845989 0.9427329088738651 0.8639489235930221 0.8230293166627982 0.7525250034649555 0.6961571346851403 0.7071680484552542 0.5839248196807824 0.8110445126839907 1.1505300481490865 1.0 12.308698105809007 -10.136355426288047 0.9858122005868006 0.9811680097792691 0.7740354858349568 0.5231333044180841 0.10410036604940502 0.35649615018565484 0.6915217222068281 0.04016963831211602 0.019012518950281453 7.305409645728123e-11 10.136355426288047 -0.20713252394431225 KKAEPSEVDMNS(ph)PKSK ddPTM_A549_PD325901_60min_R1 6 KKAEPSEVDMNSPKSK 16 3 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKAEPS(0.009)EVDMNS(0.954)PKS(0.037)K;KKAEPSEVDMNS(0.988)PKS(0.012)K;KKAEPS(0.002)EVDMNS(0.885)PKS(0.113)K;KKAEPSEVDMNS(0.989)PKS(0.011)K;KKAEPSEVDMNS(0.998)PKS(0.002)K;KKAEPSEVDMNS(0.965)PKS(0.035)K 101.38 2.1381e-07 70471700.0 5647.92 5954.46 7220.9 6608.52 7247.8200000000015 11839.300000000001 8941.0 9514.6 9035.4 7135.73 8956.9 True False 6221.292680621048 6456.263241379189 7710.953696799137 7016.713271362132 6738.758126821609 11742.884666107402 9281.254647702926 9324.823838940694 8655.673559449886 6685.178790008702 7855.258082467198 0.7919908697216286 0.8219033892456644 0.9816295805748069 0.8932505078379687 0.8578659104609692 1.494907556547037 1.181534018394447 1.1870805186851265 1.1018955034423632 0.8510450859571256 1.0 12.939442960331657 KKAEPSEVDMNSPK ddPTM_A549_MK2206_60min_R1 4 KKAEPSEVDMNSPK 14 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ;;; 128.14 4.1209e-09 76859000.0 5555.179999999999 6490.099999999999 6212.7 5544.8 8365.3 6239.15 5980.6 5737.18 8944.2 9719.599999999999 9952.1 False True 6492.7585728887625 6820.418368541582 7093.754279669767 6903.276248915533 7134.7754514459 6899.372711787415 7067.197605859692 6550.442834376868 6918.352980952448 7523.935609444632 7480.718906013103 0.8679324346313555 0.911733010454281 0.948271732810026 0.9228092026511765 0.9537553196539534 0.9222873895504355 0.9447217165423744 0.875643493182391 0.9248246148363337 1.0057770789110645 1.0 12.868961206152287 -10.46490596581886 0.7670847171759011 1.0010840574411284 0.9205827976251615 0.5958235456354934 0.026302434990131088 0.39525159533487253 0.4140327162220662 0.018355432753931165 0.00513557164624632 3.428420112469151e-11 10.46490596581886 -0.0805012598159669 KKAEPSEVDMNSPK ddPTM_A549_PD325901_60min_R1 4 KKAEPSEVDMNSPK 14 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ;;; 138.87 5.387999999999999e-10 69158000.0 7421.400000000001 7230.299999999999 7460.0 7391.499999999999 9083.5 8704.900000000001 8459.3 8788.199999999999 8580.1 9062.6 8568.4 False True 8174.815064654074 7839.622755740052 7966.280460624242 7848.0561676855295 8445.506296373818 8634.010180500401 8781.223290606582 8612.912456790467 8219.508235101483 8490.38588936701 7514.5411195627885 1.087866169681656 1.0432603443117732 1.0601153595241404 1.0443826233453555 1.1238884932557525 1.148973708856722 1.1685641412948302 1.146166122422068 1.093813727854045 1.1298608596689663 1.0 12.875469292364047 -10.333531583312944 0.9249482401765966 1.0052474058041034 1.1013060652525917 0.0 0.05480019499802496 0.4144780116693921 0.6849443898118407 0.023110253718825403 0.008783068440964149 4.639470490108074e-11 10.333531583312944 0.09605865944848824 KKDAS(ph)DDLDDLNFFNQK ddPTM_A549_PD325901_60min_R1 3 KKDASDDLDDLNFFNQK 17 2 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 KKDAS(1)DDLDDLNFFNQK;KKDAS(1)DDLDDLNFFNQK;KKDAS(1)DDLDDLNFFNQK 192.69 1.0361e-40 15793300.0 9797.5 9743.199999999999 10923.599999999999 11386.2 12876.5 11716.5 11299.5 12760.8 12524.7 12074.7 12752.3 True False 10792.134987461714 10564.293657763366 11664.941184943025 12089.49971406359 11972.099061513452 11621.084708593193 11729.50865582366 12506.275833346057 11998.330414817496 11312.301381318806 11183.84794349009 0.9649751178657267 0.9446027620495902 1.0430167902750298 1.0809785482733305 1.0704812084361528 1.0390953782018837 1.0487900689539675 1.1182444447150883 1.0728266760638052 1.0114856209131033 1.0 13.449129030509193 -5.767886552043198 21.919280079291088 1.0478381826068688 0.9547888854831801 0.5861913203521854 0.031781302667207884 18.743156544433226 63730.26922665073 0.005284715000577571 0.017113629829908685 1.7065281161572822e-06 5.767886552043198 -0.0930492971236887 KKDDS(ph)FLGK ddPTM_A549_MK2206_60min_R1 2 KKDDSFLGK 9 2 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 KKDDS(1)FLGK;KKDDS(1)FLGK 86.31299999999999 0.0002472 6740400.0 2991.0 3500.2 2957.8 3197.2 4174.2 3003.8 2943.5 3020.7 4434.5 4850.9 4617.7 True False 3495.807677070821 3678.345229437025 3377.260516105274 3980.5141435277637 3560.180709529302 3321.660122238935 3478.295848718856 3448.8934755057726 3430.0928304413596 3755.0783209036335 3470.997647963416 1.0071478092536197 1.0597371714138928 0.9729941816834299 1.1467925211252457 1.0256937833473363 0.9569756188650534 1.00210262336528 0.9936317523952767 0.9882152563410531 1.081844098369499 1.0 11.761134672222001 -7.007050197039437 24.987608073368378 0.9924881658249941 1.047827036451445 0.12091833841088273 0.04917947540696439 305.30972189184973 1082097.763331303 0.00543792657914927 0.010002688449801624 9.838973774227084e-08 7.007050197039437 0.05533887062645093 KKDDS(ph)FLGK ddPTM_A549_PD325901_60min_R1 3 KKDDSFLGK 9 2 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 KKDDS(1)FLGK;KKDDS(1)FLGK;KKDDS(1)FLGK 101.47 0.00015045 14248200.0 5119.7 5646.7 5712.3 5333.5 6281.3 6100.7 5924.8 6421.0 6650.2 6301.9 5794.5 True False 5639.448175076059 6122.567226095371 6099.971028850385 5662.938181742648 5840.123157308618 6051.017921880637 6150.271506174964 6292.928117822946 6370.715220693448 5903.996958511017 5081.813234361906 1.1097314905127897 1.204799732641915 1.2003532494275782 1.1143538576843646 1.1492203447815075 1.190720249411218 1.2102513851922811 1.2383233754581522 1.2536303336801753 1.1617894413336005 1.0 12.311127639429362 -10.88512793682106 1.1346947910662273 1.0000008620800167 1.1908907221458804 0.14313734378186582 0.06355182824114905 0.22801577719533037 0.5213203207867653 0.034090733173306485 0.00819291136811985 1.3027829410626484e-11 10.88512793682106 0.19088986006586373 KKDEGS(ph)YSLEEPK ddPTM_A549_MK2206_60min_R1 5 KKDEGSYSLEEPK 13 2 P18827 P18827 SDC1 Syndecan-1 1 KKDEGS(0.998)YS(0.002)LEEPK;KKDEGS(0.622)YS(0.378)LEEPK;KKDEGS(0.977)YS(0.023)LEEPK;KKDEGS(0.492)Y(0.016)S(0.492)LEEPK;KKDEGS(0.91)YS(0.09)LEEPK 152.71 9.04e-14 142229900.0 25671.22 27906.2 28968.3 24020.899999999998 37630.9 27070.199999999997 28322.100000000002 29075.2 40598.1 40576.700000000004 41087.6 True False 30003.89433492947 29326.50638298256 33076.44053306255 29906.021578339187 32095.444459351795 29934.750596255533 33467.8589627995 33196.6986390656 31402.69517184383 31410.395288257972 30884.41495992845 0.9714898072007702 0.9495568046548 1.07097513668231 0.9683208057248713 1.039211670384387 0.9692510165756717 1.0836487919950237 1.07486894869588 1.016781286373332 1.0170306068291066 1.0 14.914591381686325 -6.766115719499158 24.99985534190944 1.0178994832426829 0.9929685442487349 0.12976080572998527 0.042373049244007616 264.9159472057766 1416251.8538299005 0.006147603325277793 0.01189633374522963 1.7135006775768928e-07 6.766115719499158 -0.024930938993947938 KKDEGS(ph)YSLEEPK ddPTM_A549_PD325901_60min_R1 1 KKDEGSYSLEEPK 13 2 P18827 P18827 SDC1 Syndecan-1 1 KKDEGS(0.998)YS(0.002)LEEPK 118.53 4.4502999999999996e-06 51457000.0 3973.7 4201.4 4689.8 4371.5 4301.0 5292.8 4282.8 4573.7 4853.2 5321.4 5380.6 True False 4377.1070987166695 4555.466722814584 5008.078030058387 4641.517626603165 3998.912597644496 5249.697191622246 4445.7842976380825 4482.473965501758 4649.236881457618 4985.405895844195 4718.82031043363 0.9275850341320669 0.9653825369747899 1.0612987358270858 0.9836182183798049 0.847439049290059 1.112502033615226 0.942138925656515 0.9499141036565233 0.9852540625837866 1.0564941167225899 1.0 12.204210520306788 -8.768845819091712 0.003575364273340868 1.9689305635382317 6.642752213876245e-05 0.05245745525492096 0.06762408144345727 28667.1270359592 81.06707523343484 22347.260773148853 22290.89604482123 1.702762906899674e-09 8.768845819091712 -1.968864136016093 KKDEGSYS(ph)LEEPK ddPTM_A549_MK2206_60min_R1 6 KKDEGSYSLEEPK 13 2 P18827 P18827 SDC1 Syndecan-1 1 KKDEGS(0.005)YS(0.995)LEEPK;KKDEGS(0.021)YS(0.979)LEEPK;KKDEGS(0.496)YS(0.504)LEEPK;KKDEGS(0.011)YS(0.989)LEEPK;KKDEGS(0.008)YS(0.992)LEEPK;KKDEGS(0.424)YS(0.576)LEEPK 159.88 3.1783000000000005e-19 256680300.0 30877.2 29567.8 30681.399999999998 28088.4 38495.8 30861.600000000002 30537.600000000002 30847.999999999996 45295.9 43619.799999999996 42032.299999999996 True False 36088.516484938526 31072.67472571514 35032.48387275419 34970.05926093617 32833.11881507789 34127.35402772792 36085.88663490303 35220.79846803787 35036.45097268888 33766.0568847332 31594.51987753486 1.1422397499573684 0.9834830485209944 1.1088151998683757 1.106839394821805 1.0392029675508292 1.0801668821052102 1.1421565124197925 1.1147755561584418 1.1089407627808703 1.0687314450612178 1.0 14.947386721776784 -10.766905467481255 1.0205193926111116 1.0000960974978244 1.0905470506385966 0.1234582289658771 0.04792247049875416 0.4520490894350317 0.837427525430549 0.029236849361329947 0.0074530056573172895 1.710387573215075e-11 10.766905467481255 0.09045095314077223 KKDEGSYS(ph)LEEPK ddPTM_A549_PD325901_60min_R1 7 KKDEGSYSLEEPK 13 2 P18827 P18827 SDC1 Syndecan-1 1 KKDEGS(0.011)YS(0.988)LEEPK;KKDEGS(0.105)YS(0.895)LEEPK;KKDEGS(0.369)YS(0.631)LEEPK;KKDEGS(0.015)YS(0.985)LEEPK;KKDEGS(0.002)YS(0.998)LEEPK;KKDEGS(0.294)YS(0.706)LEEPK;KKDEGS(0.357)YS(0.643)LEEPK 169.25 2.6495e-22 621189000.0 42949.7 42303.4 44301.5 44638.3 48167.2 45485.899999999994 45335.6 47475.50000000001 48741.700000000004 49076.1 52430.0 True False 47309.92192610198 45868.45598179523 47308.06619656097 47395.50641006522 44784.102039819125 45115.4779112021 47060.87106659222 46528.56390869075 46693.25585282762 45977.42667062037 45981.44238115364 1.0288916457630055 0.9975427826203922 1.0288512875348832 1.030752928914017 0.9739603570629775 0.9811670877400211 1.023475311550492 1.01189874652043 1.0154804511301223 0.9999126667123667 1.0 15.488764101879992 KKDELS(ph)DYAEK ddPTM_A549_MK2206_60min_R1 6 KKDELSDYAEK 11 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 KKDELS(0.999)DY(0.001)AEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK 128.9 3.5422e-08 226444000.0 46006.2 45203.8 45813.3 39235.5 61696.399999999994 48732.7 42788.4 43608.4 68169.7 67509.5 70638.9 True False 53770.92181640105 47504.48033895937 52310.31482942925 48848.199261348505 52620.941288726906 53889.561967851834 50562.498417979274 49790.02424512395 52729.37179464166 52259.057062616 53097.31159553952 1.0126863338391339 0.8946682781383987 0.9851782182098955 0.9199750004942253 0.9910283535550484 1.0149207247694036 0.9522609883364945 0.9377127155587779 0.9930704627062744 0.9842128629918442 1.0 15.696351196398652 -8.722653994746077 0.38249594320883623 1.0040000280629815 0.9551909318315548 0.053165878162955704 0.03671308961879284 1.3706833699633123 0.5430135105065749 0.02102493818203587 0.020128589699687373 1.8938518619153227e-09 8.722653994746077 -0.04880909623142671 KKDELS(ph)DYAEK ddPTM_A549_PD325901_60min_R1 5 KKDELSDYAEK 11 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(0.911)DY(0.089)AEK 143.97 5.1918e-12 524597400.0 55651.1 56834.6 60148.3 56457.1 66180.6 60013.7 61458.8 60956.1 62759.6 64422.2 65452.1 True False 61300.758703825486 61624.25120304602 64230.32533911055 59944.32684362295 61532.30296667547 59524.96832467878 63797.648265545824 59740.28276636461 60122.032264387955 60354.571297638555 57401.90663504685 1.0679219959289328 1.0735575665603625 1.1189580469422002 1.0442915637757548 1.0719557341167967 1.03698590890247 1.1114203692076325 1.0407369069843764 1.0473873741970852 1.0514384423040914 1.0 15.808811037134097 -10.024479473464242 0.3086454590603554 0.9811347488732051 1.0819674192802768 0.22218661022938124 0.0285005964545637 1.2368717775491551 0.21868797035353194 0.04501335784496292 0.013027733162902039 9.451930650800712e-11 10.024479473464242 0.10083267040707178 KKDENYRS(ph)LPR ddPTM_A549_MK2206_60min_R1 1 KKDENYRSLPR 11 3 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q8TEW0-6;Q8TEW0-7;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 KKDENY(0.001)RS(0.999)LPR 50.155 0.0047225 49117000.0 1333.3 1480.9 1276.7 1224.2 1528.5 1198.2 1200.1 1430.4 1850.5 1779.1 1566.2 True False 1558.3284439446752 1556.2714845646801 1457.7552575940242 1524.129054956426 1303.6596747917065 1324.9927286992108 1418.142635653983 1633.1635804162788 1431.3647046412757 1377.2000743613867 1177.2693150790008 1.3236805070725073 1.3219332778245787 1.2382512980865397 1.2946307488309496 1.1073589178736254 1.1254797111655774 1.2046034135858017 1.3872472165017613 1.2158345472082774 1.1698258475962822 1.0 10.201228677327215 -10.411205963397741 0.6547002547202734 0.9874959236437502 1.2470285497720899 0.2323678911328344 0.09440828163293875 0.5177465433226067 0.3822281395125919 0.07179309569209583 0.018432504087532227 3.879663300019183e-11 10.411205963397741 0.2595326261283397 KKDENYRS(ph)LPR ddPTM_A549_PD325901_60min_R1 5 KKDENYRSLPR 11 3 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q8TEW0-6;Q8TEW0-7;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 KKDENYRS(1)LPR;KKDENY(0.004)RS(0.996)LPR;KKDENYRS(1)LPR;KKDENY(0.013)RS(0.987)LPR;KKDENYRS(1)LPR 90.70700000000001 8.7861e-05 497923000.0 12376.8 12159.2 12675.6 12550.2 14378.7 14554.900000000001 12961.3 14569.2 13740.0 14770.8 15771.5 True False 13633.283624681399 13183.898456716117 13535.842440574874 13325.39735042779 13368.789715822115 14436.36972006171 13454.5493641955 14278.605876683698 13162.555582137089 13838.169167199509 13831.705483775784 0.985654563038005 0.9531650650153354 0.9786097930188038 0.963395104534153 0.96653227120136 1.0437158119795986 0.9727324934714177 1.0323098545896683 0.9516220250334574 1.000467309214421 1.0 13.7556914349017 KKDPETYEVDS(ph)GTTK ddPTM_A549_MK2206_60min_R1 2 KKDPETYEVDSGTTK 15 2 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 KKDPETY(0.001)EVDS(0.86)GT(0.126)T(0.013)K;KKDPETYEVDS(0.88)GT(0.105)T(0.015)K 88.56 7.5427e-06 7886900.0 1953.51 2017.33 2361.7 1862.87 2436.0 2033.61 1835.56 1866.42 2831.8 3030.0 3370.8 True False 2283.214729266006 2120.003480286897 2696.6245726167504 2319.2732336274125 2077.6676269496875 2248.8052603989327 2169.0574921265106 2130.9907506715285 2190.4018214553726 2345.520895573607 2533.7373306527234 0.9011252672658931 0.8367100467122046 1.0642873434406341 0.9153566178976957 0.8200011902632597 0.8875447479078707 0.8560703849943804 0.8410464355918685 0.8644944347451742 0.9257158850674433 1.0 11.307051254520937 -10.758081038165022 1.0273542337477413 0.9994811906407267 0.8869424842420076 0.131625491258605 0.06595359956745463 0.5338309655195544 1.0078384122124522 0.04288955963939162 0.01113565290702875 1.7454964176631658e-11 10.758081038165022 -0.1125387063987191 KKDS(ph)PEPQVK ddPTM_A549_MK2206_60min_R1 4 KKDSPEPQVK 10 2 Q96JQ2 Q96JQ2 CLMN Calmin 1 KKDS(1)PEPQVK;KKDS(1)PEPQVK;KKDS(1)PEPQVK;KKDS(1)PEPQVK 122.78 6.9384e-06 82009500.0 11064.2 10980.37 11003.8 9524.13 15627.0 12638.669999999998 11208.8 11199.5 16770.5 15793.8 17231.7 True False 12931.566466281172 11539.22393204772 12564.304302900544 11857.542277554448 13328.289000961722 13976.085670529832 13245.293870942734 12787.06342203029 12972.008526985415 12225.96961072952 12952.59331927392 0.9983766298783227 0.8908813584749044 0.9700222953965838 0.9154570042672462 1.0290054410284584 1.0790183344776925 1.022597833843302 0.9872203277626794 1.0014989436657913 0.9439012952361319 1.0 13.660953357329198 -6.764734529551113 24.999822578342844 1.0090258338377205 0.9417939633487461 0.3812258768659743 0.040024210571741596 57.618275505332264 437146.6952316465 0.004956083738617832 0.009644727881792273 1.7189588111066566e-07 6.764734529551113 -0.06723187048897439 KKDS(ph)PEPQVK ddPTM_A549_PD325901_60min_R1 4 KKDSPEPQVK 10 2 Q96JQ2 Q96JQ2 CLMN Calmin 1 KKDS(1)PEPQVK;KKDS(1)PEPQVK;KKDS(1)PEPQVK;KKDS(1)PEPQVK 111.88 3.0587e-05 119533000.0 13895.7 14219.0 14124.6 13053.199999999999 16188.9 15512.5 15506.9 16085.5 15849.6 16521.0 17254.4 True False 15306.38123452633 15417.285031584846 15083.180294119713 13859.4665180319 15051.847512673103 15386.17134315299 16097.02356520128 15764.662083669375 15183.496430468704 15477.861240508506 15132.218184653402 1.011509419686372 1.0188384044859033 0.9967593719615131 0.9158912691390952 0.9946887712693828 1.0167822823726622 1.0637583577486578 1.0417945268366124 1.0033886800460825 1.0228415326581561 1.0 13.885335862770772 -7.008422189387285 24.963131814015377 1.0109005149324883 0.9846983340402865 0.19819599188075665 0.0314282487870394 707.4682711646711 2096923.091258758 0.0049432237043306685 0.009041753063270245 9.80794023088387e-08 7.008422189387285 -0.026202180892201832 KKEENS(ph)TEEQALEDQNAK ddPTM_A549_MK2206_60min_R1 1 KKEENSTEEQALEDQNAK 18 2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 1 KKEENS(0.847)T(0.153)EEQALEDQNAK 116.48 1.0173e-10 5440000.0 1219.0 1175.0 979.83 678.65 1133.2 909.5 981.36 965.82 1138.2 1134.9 1329.1 True False 1424.7373983113785 1234.8024811692214 1118.7846275932889 844.9192804657564 966.5077811409628 1005.7426863227606 1159.6604090704056 1102.7279426997002 880.39951733191 878.5253017777185 999.0477887061041 1.4260953424025864 1.2359793947078848 1.119850962327097 0.8457245889709 0.9674289779397992 1.0067012786498704 1.1607657032826384 1.1037789735042356 0.8812386427201256 0.8793626408157333 1.0 9.964409879684636 -5.6720951299674605 1.8168885771921621 0.9709280672540029 1.4242881659179856 0.6858213499888897 0.09349604811044192 0.1926881435464984 1.0626477068870532 0.014226477605126804 0.11326409666692797 2.1276729391463205e-06 5.6720951299674605 0.45336009866398264 KKEENS(ph)TEEQALEDQNAK ddPTM_A549_PD325901_60min_R1 1 KKEENSTEEQALEDQNAK 18 2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 1 KKEENS(0.857)T(0.143)EEQALEDQNAK 137.09 1.1564e-13 5348400.0 807.85 855.29 888.93 1274.4 1232.2 928.59 785.78 1117.6 961.78 1033.5 1047.0 True False 889.8623372922623 927.3682899405159 949.2581353703353 1353.1167936276047 1145.65452285923 921.0278709130332 815.6832878953144 1095.3085912597603 921.3597312800437 968.2446336217865 918.2256374798376 0.969110751181571 1.009956869082605 1.0337961570923564 1.4736212303343756 1.2476830052399688 1.003051791758817 0.8883255428742319 1.1928534191943765 1.0034132065935426 1.0544735347177097 1.0 9.842704903407084 -7.289596611696317 23.365061775852165 1.0082355846678699 1.1511043487164352 0.14715786196357428 0.14487240186303066 429.73540083726454 356596.4237615438 0.02218831424572041 0.03547711374397444 5.1333796935437845e-08 7.289596611696317 0.1428687640485653 KKEEPSQNDIS(ph)PK ddPTM_A549_MK2206_60min_R1 7 KKEEPSQNDISPK 13 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPS(0.069)QNDIS(0.931)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK 163.91 1.4875e-19 1735500300.0 30106.86 31502.699999999997 29645.55 28945.1 41189.0 31943.36 29154.440000000002 30198.989999999998 42685.1 46528.8 44271.50000000001 True False 35188.16192594331 33106.052871089036 33849.73476679446 36036.650799394934 35130.15266273837 35323.585152913736 34451.42436681606 34479.78931302813 33016.993004097974 36017.91176434498 33277.66471875879 1.0574107955991143 0.9948430321322093 1.017190811100191 1.0829080436969754 1.0556676064752624 1.0614802886995147 1.0352716952339394 1.03612406713118 0.9921667666026495 1.0823449322163974 1.0 15.022266574540554 -8.704891777128113 4.848961570754906 0.996260127773607 1.0427554640762662 0.0 0.03412344017961397 0.13446997075033315 6.48973440273981 0.003963845443626267 0.004449568439196926 1.972914310059817e-09 8.704891777128113 0.04649533630265923 KKEEPSQNDIS(ph)PK ddPTM_A549_PD325901_60min_R1 12 KKEEPSQNDISPK 13 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKEEPSQNDIS(1)PK;KKEEPS(0.017)QNDIS(0.983)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPS(0.005)QNDIS(0.995)PK;KKEEPS(0.001)QNDIS(0.999)PK 181.51 9.525599999999999e-26 14630558100.0 57195.61 68382.29999999999 61900.619999999995 72373.79999999999 73125.45 66114.62 66006.95999999999 66872.40000000001 78537.5 70757.7 73429.75 True False 63002.066222017325 74145.11640870263 66101.56831186682 76844.16525317455 67989.37066110733 65576.20445495233 68518.89098319435 65538.57752161723 75236.84199651315 66290.04674641532 64398.356259536864 0.9783179242666965 1.15135107035783 1.0264480671752818 1.1932628364531364 1.0557625164701105 1.0182900350851896 1.0639850915922604 1.0177057510208036 1.168303763737311 1.0293748256439126 1.0 15.97473624418625 KKEEPSQNDIS(ph)PKTK ddPTM_A549_MK2206_60min_R1 2 KKEEPSQNDISPKTK 15 3 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKEEPSQNDIS(0.998)PKT(0.002)K;KKEEPSQNDIS(0.992)PKT(0.008)K 80.238 7.081600000000001e-05 8219500.0 2359.5 3220.8 2827.9 2849.1 2751.5 2015.9 2481.0 1859.4699999999998 3195.3999999999996 5178.1 4541.1 True False 2757.7259157634926 3384.724962850916 3228.9387428136115 3547.1296279009593 2346.75799489001 2229.2211999538795 2931.7655854158284 2123.055566888044 2471.647002005259 4008.3636136533632 3413.4195420158676 0.8079071095183509 0.9915935973261566 0.9459542558623465 1.0391718873813345 0.687509392268869 0.6530756540514107 0.858894006238803 0.6219732267760523 0.7240970444979568 1.1742956188989704 1.0 11.737002031061184 -4.933566307732132 19.466315574897852 0.8490051740514676 0.0006146380349199694 0.0 0.17221019714390992 596.3043888421658 582822.8903801563 0.021652909775620233 50395.91653780338 1.1652891218487995e-05 4.933566307732132 -0.8483905360165476 KKEEPSQNDIS(ph)PKTK ddPTM_A549_PD325901_60min_R1 2 KKEEPSQNDISPKTK 15 3 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKEEPSQNDIS(0.993)PKT(0.007)K;KKEEPS(0.003)QNDIS(0.993)PKT(0.004)K 93.26899999999999 4.3666e-06 15650900.0 3338.7 2653.1 2740.3 3411.1 5357.4 4870.299999999999 3735.3999999999996 3275.6 5474.5 3354.0 3583.3 True False 3677.642366178965 2876.6860480552605 2926.2732367625485 3621.7958998298222 4981.114706026653 4830.637891542818 3877.5526910893122 3210.2655883415096 5244.42580308657 3142.22786760278 3142.576816410222 1.1702633160706475 0.91539084519223 0.9311699944713657 1.1524924007957948 1.5850415111623588 1.5371582537991464 1.2338768207164006 1.0215392577129137 1.6688297882491538 0.9998889609298904 1.0 11.617732294637898 -6.525803184305767 24.78185125771039 1.3278128223203964 1.0041271054206036 0.22160195414791906 0.2305537913273132 91.00816557478663 771208.4950470823 0.03893021889933441 0.08140048682774235 2.9798665539554927e-07 6.525803184305767 -0.32368571689979286 KKEEPSQNDISPK ddPTM_A549_MK2206_60min_R1 3 KKEEPSQNDISPK 13 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ;; 164.68 1.884e-19 253607700.0 13603.6 13583.8 13602.5 12702.31 18058.4 13529.54 13606.14 13713.08 18290.3 20361.300000000003 20763.2 False True 15899.55510391194 14275.157398899122 15531.539039259582 15814.376520228368 15402.033281817821 14961.2269426182 16078.199517271149 15656.951084546194 14147.576253607313 15761.66818846301 15607.124404832273 1.0187370005834724 0.9146564753773124 0.9951569960223237 1.0132793274417629 0.9868591344763709 0.9586152166497698 1.0301833380845622 1.003192559911837 0.9064819300874506 1.0099021305669151 1.0 13.929917126407059 KKEEPSQNDISPK ddPTM_A549_PD325901_60min_R1 4 KKEEPSQNDISPK 13 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ;;; 167.98 4.765e-22 216821000.0 20118.4 18228.3 20436.0 19198.5 23474.9 21410.1 22764.0 22172.3 22750.1 21716.3 23017.8 False True 22160.805157616694 19764.462813224414 21822.909851651068 20384.347742042984 21826.104008008562 21235.74324409602 23630.29647693878 21730.05608266713 21793.992412603842 20345.12911187305 20186.756521856165 1.0977892923820243 0.9790806557668373 1.081050827953636 1.0097881608654113 1.0812090582445713 1.0519641043425731 1.170584112972993 1.0764510910477392 1.0796183323956736 1.007845370792748 1.0 14.301121505883168 -4.911448945155027 20.27996798680011 1.0504762270094992 4.055388999211992 0.054065719402321744 0.051300782392877546 1243.7635146241362 285748.91254005843 0.007143066378668109 543.6676860673161 1.2261710405738765e-05 4.911448945155027 3.004912772202493 KKEIQNGNLHES(ph)DSESVPR ddPTM_A549_MK2206_60min_R1 4 KKEIQNGNLHESDSESVPR 19 2 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 KKEIQNGNLHES(0.992)DS(0.008)ESVPR;KKEIQNGNLHES(0.998)DS(0.002)ESVPR;KKEIQNGNLHES(1)DSESVPR;KKEIQNGNLHES(1)DSESVPR 223.75 2.2938999999999997e-75 89663900.0 4578.469999999999 5430.89 5376.48 4764.52 7666.5 5167.09 5047.43 5267.88 8295.3 8704.1 10004.9 True False 5351.203803155612 5707.299103793283 6138.945709523863 5931.827613887431 6538.7680057511425 5713.868034163252 5964.482696007822 6014.618122205895 6416.427794872073 6737.837764740015 7520.407208807238 0.7115577194927363 0.7589082539452648 0.816304960499276 0.7887641518853656 0.8694699401507825 0.7597817346209222 0.7931063478880167 0.7997729318649267 0.8532021759882521 0.8959405491831949 1.0 12.876595066541247 -10.707816514048647 0.26787802532037636 1.1114456813056122 0.7577433618573222 0.5941443687707098 0.048170855618236634 1.341955175577078 0.12701962968139732 0.15211901663689725 0.02465738539194268 1.9596724445928607e-11 10.707816514048647 -0.35370231944829 KKEIQNGNLHES(ph)DSESVPR ddPTM_A549_PD325901_60min_R1 8 KKEIQNGNLHESDSESVPR 19 2 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 KKEIQNGNLHES(0.998)DS(0.002)ESVPR;KKEIQNGNLHES(0.89)DS(0.11)ESVPR;KKEIQNGNLHES(1)DSESVPR;KKEIQNGNLHES(0.99)DS(0.01)ESVPR;KKEIQNGNLHES(0.995)DS(0.005)ESVPR;KKEIQNGNLHES(0.998)DS(0.002)ESVPR;KKEIQNGNLHES(0.932)DS(0.049)ES(0.019)VPR;KKEIQNGNLHES(0.99)DS(0.009)ES(0.002)VPR 200.54 2.5530999999999995e-55 201483000.0 10314.569999999998 10170.669999999998 10093.749999999998 10731.44 13892.199999999999 13943.060000000001 11869.77 13415.230000000001 12577.689999999997 14337.660000000002 15007.369999999999 True False 11361.697553214897 11027.788054869468 10778.772573649581 11394.296675931433 12916.459797488225 13829.512342166805 12321.480592737369 13147.652713605656 12049.093429395172 13432.377700719633 13161.558629556619 0.863248637414431 0.8378785799809918 0.818958671767334 0.8657254810492973 0.9813776742582766 1.0507503504265958 0.9361718425253446 0.9989434445917571 0.9154761809392994 1.0205765197561665 1.0 13.68404272682794 -6.683792169943477 4.709524454421541 0.9685798461093736 0.8406442472130587 0.743075966743951 0.03878744848950955 0.09577121926820428 3.8985552987361203 0.006020295044685562 0.012702737532669801 2.0711322445362323e-07 6.683792169943477 -0.1279355988963149 KKELEEIVQPIISK ddPTM_A549_MK2206_60min_R1 2 KKELEEIVQPIISK 14 2 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 78.373 0.00021858 4572400.0 1087.13 1243.01 1101.93 986.81 1756.83 1053.59 951.4000000000001 1074.51 1426.94 1699.52 1753.1599999999999 False True 1270.6109662233378 1306.2738996750234 1258.2002435972297 1228.5784942995845 1498.402634258628 1165.0801944835603 1124.2570648789267 1226.8250830488653 1103.7403683549437 1315.5972516320978 1317.8019872454997 0.9641895964045389 0.9912520335512829 0.9547718517462165 0.9322937028404303 1.1370468771189395 0.884108694447212 0.8531304974193239 0.9309631453912158 0.83756162081832 0.9983269598659429 1.0 10.363917892124595 KKELEEIVQPIISK ddPTM_A549_PD325901_60min_R1 2 KKELEEIVQPIISK 14 2 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 91.03200000000001 2.2202e-05 7690500.0 982.11 1342.35 1534.08 1324.17 1629.1299999999999 1594.8400000000001 1339.71 1634.6599999999999 1678.29 1564.48 1464.4 False True 1081.8130842088312 1455.474545477734 1638.1918939724433 1405.9609734917342 1514.705528993392 1581.8521518075165 1390.6933971674412 1602.055423934037 1607.7573077106872 1465.6984658041733 1284.2880835964415 0.8423445627396839 1.1332928834797815 1.2755641938099676 1.0947395615122173 1.1794125853380992 1.2316957324541973 1.0828515929798466 1.2474268385701588 1.2518665619075295 1.1412536521398855 1.0 10.326753139893459 -5.264314965770465 5.982001900065271 1.1468528407541039 0.8344286795666077 0.5507808569907319 0.08224391226183367 0.09704141332192648 16.570539857256627 0.014376761150075447 0.12319649613266204 5.441079033558074e-06 5.264314965770465 -0.31242416118749616 KKELQGDGPPS(ph)SPTNDPTVK ddPTM_A549_MK2206_60min_R1 1 KKELQGDGPPSSPTNDPTVK 20 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KKELQGDGPPS(0.377)S(0.377)PT(0.245)NDPTVK 69.152 0.00022288 10000000.0 1055.7 1681.6 1938.1 921.56 2085.3 1825.6 1526.7 1451.9 2369.0 2427.1 2396.3 True False 1233.8763506130606 1767.1862573056692 2212.9517229912885 1147.3422413704002 1778.555132380206 2018.7837802647966 1804.081628075108 1657.7112712572678 1832.4252825156343 1878.8164243058416 1801.23257548449 0.685017785824341 0.9810983219811782 1.228576338841782 0.6369761778607582 0.9874100416498495 1.1207790752517288 1.001581723886962 0.9203205037591448 1.0173174233331608 1.0430726436315327 1.0 10.814768758985105 -6.976390799880067 24.99938951301146 1.0093970366729996 0.9018167232701695 0.14288743214397304 0.15132339292624788 413.50233003315884 437848.6656303207 0.020487120158689646 0.03871564303510249 1.0558669597411466e-07 6.976390799880067 -0.10758031340283014 KKELQGDGPPSS(ph)PTNDPTVK ddPTM_A549_MK2206_60min_R1 1 KKELQGDGPPSSPTNDPTVK 20 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KKELQGDGPPS(0.094)S(0.871)PT(0.035)NDPTVK 108.4 1.5803999999999998e-10 10114000.0 706.93 1066.9 1304.0 874.24 1132.3 990.24 1100.5 843.62 1306.6 1704.1 1161.0 True False 826.2425012208877 1121.2006529016526 1488.9268081010468 1088.4288392461253 965.7401699487397 1095.0265395318872 1300.446604897267 963.2057184778954 1010.6571862114516 1319.1426264511492 872.6916580300853 0.9467748357832976 1.28476151064916 1.7061315922991411 1.2472089417045886 1.106622437675973 1.2547691151347493 1.4901558791483662 1.103718260183816 1.1580919525377313 1.5115792781024533 1.0 9.769328196426311 -9.255007496578559 0.6159208013585342 1.0186325473902156 1.2971790008940292 0.0 0.24011844429159881 0.7164285832993326 0.609738033715174 0.07457262390380714 0.051964155446211614 5.558946616063047e-10 9.255007496578559 0.2785464535038136 KKELQGDGPPSS(ph)PTNDPTVK ddPTM_A549_PD325901_60min_R1 2 KKELQGDGPPSSPTNDPTVK 20 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KKELQGDGPPS(0.427)S(0.548)PT(0.025)NDPTVK;KKELQGDGPPS(0.097)S(0.898)PT(0.005)NDPTVK 108.4 1.5803999999999998e-10 35152000.0 1894.41 2126.2799999999997 2151.89 1660.48 2736.2 3190.0 2897.5 2540.6 3180.2 2748.5 2850.8 True False 2086.7291086090663 2305.4690777803103 2297.9301957657767 1763.0440783763065 2544.0187513775554 3164.0216976411275 3007.765948072837 2489.9257399378553 3046.5472534434034 2574.959240938056 2500.1696727101444 0.8346349975308216 0.9221250473297752 0.9191096991728792 0.7051697721239834 1.0175384411490278 1.265522789183895 1.2030247310425402 0.9959027049707451 1.218536200441546 1.029913797069157 1.0 11.28781029061792 -6.9865753421170105 15.825256558511196 1.1161800246160678 0.8566819599614723 0.6252349070637924 0.09878828635549539 1.811256022992326 2132.871355268393 0.015838380544524112 0.029848170955080515 1.0313941359767003e-07 6.9865753421170105 -0.25949806465459546 KKEPAITSQNS(ph)PEAR ddPTM_A549_MK2206_60min_R1 4 KKEPAITSQNSPEAR 15 2 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITS(0.001)QNS(0.999)PEAR;KKEPAITS(0.002)QNS(0.998)PEAR 237.31 4.088599999999999e-65 6412760000.0 20019.4 20650.0 21730.1 19763.1 28123.3 21056.5 21040.199999999997 20467.7 30464.199999999997 28435.800000000003 28025.0 True False 23398.185292661867 21700.996796718642 24811.754933064854 24605.06038719926 23986.399824710224 23284.684853826504 24862.931991239864 23369.059154702394 23564.10734133086 22012.133030479203 21065.619049348097 1.110728587555368 1.0301618360173568 1.1778317492090358 1.1680198113124378 1.1386515520156297 1.1053406405612884 1.180261160756597 1.109345948958741 1.1186050258542048 1.0449316955231087 1.0 14.362602692140896 -10.459867702268307 0.6552041625645639 0.9931020289040764 1.1290771682887424 0.46866443036236816 0.04197031254464277 0.48258076419838747 0.3494261525978945 0.03547842103829764 0.008623592025308779 3.4684249187425485e-11 10.459867702268307 0.135975139384666 KKEPAITSQNS(ph)PEAR ddPTM_A549_PD325901_60min_R1 7 KKEPAITSQNSPEAR 15 2 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KKEPAIT(0.001)S(0.032)QNS(0.967)PEAR;KKEPAITS(0.001)QNS(0.999)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAIT(0.014)S(0.165)QNS(0.821)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR 256.13 1.4907e-77 8874225000.0 30539.129999999997 30162.100000000002 33886.45 31290.4 38234.1 32353.600000000002 34634.1 36626.2 33402.5 35303.57 37699.35 True False 33639.439995880726 32703.966020899144 36186.18827277751 33223.1369423456 35548.668716484404 32090.123008401886 35952.11962800672 35895.66170830194 31998.7090853227 33074.49656525505 33062.56894586962 1.017447859268152 0.9891538093861495 1.094476001910859 1.0048564888209037 1.0751937871096784 0.9705877078378321 1.0873964357357682 1.0856888273585361 0.9678228312419194 1.0003607590022712 1.0 15.0129112052528 -8.78164037360224 24.999904060075703 0.9848052225758434 1.039868907895783 0.2345454779745989 0.04095436189836813 220.82405576853293 273281.2685945606 0.006801659742777112 0.007244880994732044 1.6533303053991268e-09 8.78164037360224 0.05506368531993966 KKEPAITSQNS(ph)PEAREESTSSGNVSNR ddPTM_A549_MK2206_60min_R1 7 KKEPAITSQNSPEAREESTSSGNVSNR 27 3 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KKEPAITSQNS(0.994)PEAREES(0.005)T(0.001)SSGNVSNR;KKEPAIT(0.047)S(0.039)QNS(0.914)PEAREESTSSGNVSNR;KKEPAITSQNS(0.998)PEAREES(0.002)TSSGNVSNR;KKEPAIT(0.002)S(0.047)QNS(0.951)PEAREESTSSGNVSNR;KKEPAIT(0.005)S(0.029)QNS(0.754)PEAREES(0.095)T(0.095)S(0.019)S(0.004)GNVSNR;KKEPAIT(0.099)S(0.099)QNS(0.801)PEAREESTSSGNVSNR;KKEPAITS(0.001)QNS(0.979)PEAREES(0.008)T(0.009)S(0.002)SGNVSNR 147.5 1.6714e-33 785240000.0 3169.32 3386.49 2978.7300000000005 2886.99 3434.69 2758.8599999999997 2658.36 1617.46 4327.25 6185.14 6742.319999999999 True False 3704.2237335653963 3558.847876131705 3401.158704827327 3594.3026796019067 2929.4516509063315 3050.800734016945 3141.3496016308027 1846.739908263504 3347.1347841983043 4787.9125782337105 5068.0158654344605 0.730902158146233 0.7022171932026143 0.6711026159220121 0.7092129888772125 0.5780273244379833 0.6019714253115134 0.6198381546229645 0.36439110636154065 0.6604428385922916 0.9447311739666905 1.0 12.307205325507777 -10.322005286769391 0.8879462316835064 0.9837245131377336 0.6265353553539486 0.649474912487609 0.09706038234590439 0.2597299223428022 0.3938024449119591 0.05311636969199187 0.01972581089187495 4.764251871336901e-11 10.322005286769391 -0.357189157783785 KKEPAITSQNS(ph)PEAREESTSSGNVSNR ddPTM_A549_PD325901_60min_R1 6 KKEPAITSQNSPEAREESTSSGNVSNR 27 3 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 KKEPAITS(0.002)QNS(0.998)PEAREESTSSGNVSNR;KKEPAITSQNS(1)PEAREESTSSGNVSNR;KKEPAIT(0.031)S(0.031)QNS(0.939)PEAREESTSSGNVSNR;KKEPAITSQNS(1)PEAREESTSSGNVSNR;KKEPAIT(0.002)S(0.15)QNS(0.844)PEAREES(0.002)T(0.002)SSGNVSNR;KKEPAIT(0.004)S(0.027)QNS(0.754)PEAREES(0.096)T(0.096)S(0.019)S(0.004)GNVSNR 295.41 1.9784999999999999e-171 1735953000.0 5553.620000000001 5300.429999999999 5079.73 5609.7300000000005 5429.1 7421.37 6110.280000000001 6826.62 7419.700000000001 6141.04 6713.29 True False 6117.4194140410455 5747.115837960701 5424.47102469796 5956.2302814788045 5047.778745378223 7360.932823267385 6342.81004907351 6690.457708720211 7107.875811701783 5753.293686363553 5887.5978890515935 1.039034854166386 0.9761393264726641 0.9213385708261682 1.0116571127513374 0.8573579311122667 1.2502438111399494 1.0773171280716054 1.1363645810733087 1.2072624431297156 0.9771886251033229 1.0 12.523463426287766 -7.253375183339345 24.99965895715131 1.1111704640124582 0.9625399157319171 0.4181114524794405 0.08627419440684356 507.16264932949775 1572243.7711124846 0.01366648298988748 0.023397179210767803 5.5798794538224325e-08 7.253375183339345 -0.14863054828054112 KKEPAITSQNSPEAR ddPTM_A549_MK2206_60min_R1 2 KKEPAITSQNSPEAR 15 2 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 0 ; 122.93 1.2277e-07 255110000.0 2680.4 2756.4 2143.4 1918.45 3512.1 2321.1 2663.6000000000004 2387.1 3526.0 3276.4 3603.0 False True 3132.7859905117466 2896.6889864636933 2447.366350064253 2388.4703361224933 2995.4747424507373 2566.7172613785174 3147.541641803142 2725.4787351871505 2727.3666298649764 2536.2589644413747 2708.275662258742 1.1567456127781899 1.06956947803748 0.9036622025481383 0.8819155189433241 1.106044995416924 0.9477311697428308 1.162193969271963 1.0063520391103986 1.007049122758173 0.9364847898555855 1.0 11.403158875987536 -11.01781758361364 0.00401270285184712 2.934176154855469e-08 2.006524899797958 0.044664237011117325 0.09043551044254408 110787.92954003104 89.75133449119316 22940.567460403923 21945.57844939908 9.598036924882829e-12 11.01781758361364 2.0065248704561967 KKEPAITSQNSPEAR ddPTM_A549_PD325901_60min_R1 2 KKEPAITSQNSPEAR 15 2 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 0 ; 137.52 2.6859e-10 206650000.0 2782.7 3487.3999999999996 2849.0 2491.0 3576.2 3706.7 2748.5 3254.8 3413.7 3569.8 3701.1000000000004 False True 3065.1976554845305 3781.2954370313646 3042.3502724287473 2644.863412528534 3325.020049220237 3676.5138641524686 2853.0956715369102 3189.8804606587955 3270.234060461524 3344.4022187741216 3245.888163205946 0.9443324912516553 1.1649493903993906 0.9372936217937449 0.8148350403780446 1.0243791166039846 1.1326680647312246 0.8789876693468462 0.9827450301023828 1.0075005348402182 1.030350415853784 1.0 11.66439757747227 KKEPAITSQNSPEAREESTSSGNVSNR ddPTM_A549_MK2206_60min_R1 2 KKEPAITSQNSPEAREESTSSGNVSNR 27 3 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 0 ; 105.35 5.5919e-13 11996100.0 254.43 344.2 520.43 232.27999999999997 340.22 241.8 371.66999999999996 241.70999999999998 551.97 633.3399999999999 698.39 False True 297.37156378372737 361.71830980293254 594.2347996472606 289.18861042744527 290.1740886867086 267.3871155061504 439.19762802559444 275.9731327058296 426.94967631496627 490.26805412626646 524.9604884165645 0.5664646584749409 0.6890391139607126 1.1319610004167129 0.5508769075168367 0.5527541502446387 0.5093471249858608 0.8366298754223273 0.525702674382687 0.8132986876836622 0.9339141991525102 1.0 9.036065031009445 -9.52374977379705 0.9635800321347284 0.9658883118730954 0.6789523990984963 0.28195949089743244 0.17629508421726917 0.41670494797119034 0.8137898164425169 0.052197248839554324 0.03663255240398475 2.9939891778847583e-10 9.52374977379705 -0.2869359127745992 KKEPAITSQNSPEAREESTSSGNVSNR ddPTM_A549_PD325901_60min_R1 2 KKEPAITSQNSPEAREESTSSGNVSNR 27 3 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 0 ; 111.4 1.5234e-13 9118000.0 370.64 300.35 409.89 313.43 538.46 588.88 330.66 466.75 769.1800000000001 630.3 569.5899999999999 False True 408.267099949253 325.6615485784166 437.70760026880305 332.78985924882323 500.6404271861557 584.084356522542 343.24344724409474 457.4403050917085 736.8540394955027 590.5027504323293 499.53404092850104 0.8172958527318638 0.6519306431511621 0.8762317768279033 0.6662005628890783 1.002214836561685 1.1692583661303328 0.6871272408304675 0.9157339993115355 1.475082735354505 1.182107127944157 1.0 8.964439184119476 -8.602782424876077 7.995629984393705 1.2238956072583342 0.8421888844045939 0.4723019419373151 0.17598572467303844 0.1869538510115693 16.448274034751904 0.03682198043671277 0.04175593149882759 2.4958447951800506e-09 8.602782424876077 -0.3817067228537403 KKEPPRAS(ph)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR ddPTM_A549_MK2206_60min_R1 4 KKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR 47 3 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 KKEPPRAS(0.939)PPGGLAEPPGS(0.059)AGPQAGPT(0.001)VVPGSATPMETGIAETPEGR;KKEPPRAS(0.93)PPGGLAEPPGS(0.062)AGPQAGPT(0.005)VVPGS(0.002)AT(0.002)PMETGIAETPEGR;KKEPPRAS(0.964)PPGGLAEPPGS(0.036)AGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(0.779)PPGGLAEPPGS(0.204)AGPQAGPT(0.011)VVPGS(0.003)AT(0.003)PMETGIAETPEGR 84.223 8.507e-09 131457900.0 1322.68 1530.8400000000001 1054.6 1230.76 2068.31 1365.33 1322.13 1820.9299999999998 2488.36 2116.21 2287.83 True False 1545.9160475787473 1608.753217253694 1204.1581379013535 1532.296255250915 1764.0643388736896 1509.8083143672948 1562.3439070720788 2079.0524038642457 1924.7504330943893 1638.156691228324 1719.6986701041958 0.8989458877031526 0.9354855273314948 0.700214612498592 0.8910260162950954 1.0257985131585905 0.8779493411341744 0.9084986423682103 1.2089631980341513 1.1192370306233763 0.9525835657761303 1.0 10.747940079106256 -8.10836657849449 8.462154066753197 1.0692457611953154 0.8886395594422639 0.4574915043298642 0.09399142203058142 0.21580567757479985 15.37030139104381 0.015157382811610942 0.01959007612244269 7.79172150669177e-09 8.10836657849449 -0.18060620175305153 KKEPPRAS(ph)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR ddPTM_A549_PD325901_60min_R1 6 KKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR 47 3 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 KKEPPRAS(0.943)PPGGLAEPPGS(0.054)AGPQAGPT(0.001)VVPGSATPMETGIAETPEGR;KKEPPRAS(1)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(0.988)PPGGLAEPPGS(0.012)AGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(1)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(0.975)PPGGLAEPPGS(0.024)AGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(1)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR 131.88 8.151300000000001e-32 335638900.0 4214.38 3649.27 4749.68 3684.8500000000004 4649.23 5168.47 4024.6100000000006 4119.51 4676.389999999999 5413.07 4986.29 True False 4642.220755137421 3956.8067900141773 5072.021846946076 3912.454815598464 4322.6841237727795 5126.379693920766 4177.768735901094 4037.3431413569247 4479.857590884281 5071.287836399695 4373.007940696597 1.061562388655974 0.9048249725757138 1.1598473901097308 0.8946827603919765 0.9884921734407367 1.17227770071329 0.9553535672829347 0.9232416670878025 1.024433902621879 1.1596795398436588 1.0 12.094410252791521 -3.664139369390486 0.0060881190437182455 0.8347118853546417 1.1966370001732876 0.0 0.1003052245782836 332690.8412298018 203.31955611246252 5637.767565845728 6475.401245152622 0.00021670085787600389 3.664139369390486 0.36192511481864587 KKEPPRASPPGGLAEPPGS(ph)AGPQAGPTVVPGSATPMETGIAETPEGR ddPTM_A549_MK2206_60min_R1 1 KKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR 47 3 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 KKEPPRAS(0.428)PPGGLAEPPGS(0.568)AGPQAGPT(0.003)VVPGS(0.001)AT(0.001)PMETGIAETPEGR 53.687 0.00054298 49576000.0 365.52 271.0 352.94 403.61 396.66 401.96 419.27 490.51 407.68 479.25 353.94 True False 427.2108398939907 284.79274246541166 402.992199119006 502.49446811874145 338.3118394523249 444.49514040054675 495.4459318812149 560.0412946238743 315.3411309311835 370.98709214641974 266.0469297529445 1.6057724864207439 1.070460548933509 1.5147410251763893 1.8887437212125169 1.2716246707544672 1.6707395977593584 1.8622501388807382 2.1050470123595777 1.1852838565888146 1.394442298172448 1.0 8.055536944335778 -8.965574528410544 17.803654327299622 1.0817338443057143 1.6105385326793455 0.29272326364906764 0.28748650479590965 5.600799887842359 2896.5776550748656 0.04922659606178886 0.051991760421190254 1.0824939345602064e-09 8.965574528410544 0.5288046883736313 KKEQMIDLQNLLTTQS(ph)PSVK ddPTM_A549_MK2206_60min_R1 2 KKEQMIDLQNLLTTQSPSVK 20 2 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 KKEQMIDLQNLLT(0.015)T(0.106)QS(0.774)PS(0.106)VK;KKEQMIDLQNLLT(0.058)T(0.047)QS(0.868)PS(0.026)VK 67.61399999999999 0.00051216 4619300.0 1924.3 2010.6599999999999 1499.68 1900.57 2734.0 1717.3799999999999 1569.54 1765.5 3335.8 2331.15 2523.12 True False 2249.0747953819387 2112.9940057767712 1712.3571745191548 2366.20973531983 2331.8322217079017 1899.1120116954187 1854.7051015451652 2015.76503161699 2580.246626177989 1804.5415959460124 1896.5596694305502 1.1858708331898846 1.1141194447160243 0.9028754550249911 1.2476326336889227 1.2295063842668572 1.0013457748290275 0.9779313202953683 1.0628534731112529 1.3604879760797184 0.9514815826953831 1.0 10.889169046980943 KKEQSEVSVS(ph)PR ddPTM_A549_MK2206_60min_R1 5 KKEQSEVSVSPR 12 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KKEQS(0.002)EVS(0.17)VS(0.828)PR;KKEQSEVS(0.012)VS(0.988)PR;KKEQSEVS(0.001)VS(0.999)PR;KKEQS(0.016)EVS(0.144)VS(0.84)PR;KKEQSEVS(0.005)VS(0.995)PR 127.75 1.8849e-08 150789000.0 11229.9 10987.869999999999 10746.3 8143.049999999999 14770.599999999999 10925.49 10289.25 10890.349999999999 15268.2 15821.6 17969.6 True False 13125.232575305125 11547.10565001263 12270.28693090205 10138.097615555404 12597.864306495509 12081.618100046695 12158.673538790732 12434.090462798118 11809.977078305286 12247.489571421576 13507.252384269961 0.971717430155542 0.8548819050319928 0.9084221262639295 0.7505669789188104 0.9326740885634527 0.8944541610932283 0.9001589067033549 0.9205492063862221 0.8743434076984259 0.906734339671075 1.0 13.721446614188482 -10.975552481959115 0.5800774893780576 1.0283892672209032 0.8844111797935603 0.055427505013122436 0.05990088391381451 1.184244491889918 0.4814579122811103 0.09540767364875793 0.010752067659814133 1.0579070663629756e-11 10.975552481959115 -0.14397808742734286 KKEQSEVSVS(ph)PR ddPTM_A549_PD325901_60min_R1 3 KKEQSEVSVSPR 12 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KKEQSEVS(0.001)VS(0.999)PR;KKEQSEVS(0.001)VS(0.999)PR;KKEQSEVS(0.001)VS(0.999)PR 116.35 4.9912e-06 275512000.0 15344.2 15545.5 14438.599999999999 14034.8 16677.699999999997 16003.7 15205.8 16224.900000000001 15327.6 15389.2 17911.6 True False 16901.931888196985 16855.57384193699 15418.49022235512 14901.697720656559 15506.315886941542 15873.371173209825 15784.465039933037 15901.281641312187 14683.434275164795 14417.523285662692 15708.586750987448 1.0759676956384714 1.0730165678893706 0.9815326144082254 0.9486338877505853 0.9871235479516838 1.0104900857622994 1.004830370175778 1.0122668508236508 0.9347393567560613 0.9178116092942862 1.0 13.939265771572066 -5.764960821328957 6.1587471778249645 0.9769351789678823 1.075519691348096 0.6097477438295592 0.029950471156242504 0.0691713926147226 10.310745606316464 0.0042195088344086345 0.01488582862556671 1.7180633704842515e-06 5.764960821328957 0.0985845123802137 KKETITES(ph)AGR ddPTM_A549_PD325901_60min_R1 2 KKETITESAGR 11 2 Q9UM00-1;Q9UM00-2;Q9UM00;J3KS45;J3KTQ7 Q9UM00-1 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 1 KKETIT(0.001)ES(0.999)AGR;KKETIT(0.003)ES(0.997)AGR 112.17 1.0619000000000001e-05 34367000.0 7655.4 7758.9 7729.8 7684.4 8352.4 9430.900000000001 7702.0 8674.0 8397.2 8554.2 9409.0 True False 8432.570572392378 8412.769732861914 8254.39071106344 8159.04793546137 7765.756238215733 9354.097877204927 7995.1038246961125 8500.990265378636 8044.294886049603 8014.086352131091 8251.752648565225 1.021912668923564 1.0195130769370173 1.000319697234099 0.9887654517710278 0.94110385622938 1.133589223476224 0.9688976591035193 1.0302042035708314 0.9748589455657406 0.9711980828126909 1.0 13.01048486085053 KKETVSEAPPLLFS(ph)DEEEKEAQLGVK ddPTM_A549_PD325901_60min_R1 2 KKETVSEAPPLLFSDEEEKEAQLGVK 26 3 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 KKETVSEAPPLLFS(1)DEEEKEAQLGVK;KKETVSEAPPLLFS(1)DEEEKEAQLGVK 149.4 2.5894e-33 37231000.0 3407.1000000000004 3495.3 4426.5 4236.200000000001 4885.3 4529.4 5308.9 4754.4 4929.7 4296.4 4007.8999999999996 True False 3752.986283825544 3789.861197756417 4726.9089087068605 4497.86045289176 4542.173381370066 4492.5140681177845 5510.933094641549 4659.569762245354 4722.521852493538 4025.124570771787 3514.9537081713856 1.0677199745478276 1.078210842135969 1.344799761578078 1.2796357580571724 1.292242731621373 1.2781147181750405 1.5678536766586748 1.3256418573630209 1.3435516494896815 1.145142981944366 1.0 11.77928997383718 -10.733902197176892 0.9982509256886075 1.0008453736231264 1.2924766195927888 0.254033276499823 0.13383085488414231 0.44744845144721795 0.7955678037008193 0.09128642387988388 0.023785697301109594 1.845430962190196e-11 10.733902197176892 0.2916312459696624 KKEVDAT(ph)SPAPSTSSTVK ddPTM_A549_PD325901_60min_R1 1 KKEVDATSPAPSTSSTVK 18 2 H3BM18;X6RHM1;Q16666-3;Q16666-6;Q16666-2;Q16666 H3BM18 IFI16 Gamma-interferon-inducible protein 16 1 KKEVDAT(0.571)S(0.429)PAPSTSSTVK 88.396 2.431e-06 1918800.0 863.64 659.48 1003.5 1032.0 994.6 1597.7 1097.0 1408.4 1324.7 1255.8 1094.5 True False 951.3160970218347 715.0566940452611 1071.6035445357136 1095.7442961579472 924.7427271837281 1584.688860915746 1138.7469353014337 1380.3083571315738 1269.0274657683397 1176.5085736838312 959.883438607146 0.991074602143628 0.7449411723186468 1.1163892421049382 1.1415389120036745 0.9633906472285746 1.6509180148115004 1.1863387672922354 1.4379958040889755 1.3220641327136367 1.2256785838403697 1.0 9.90671541565722 -5.911892315170735 5.0526760258848515 1.1975240032543115 0.8706354824796853 0.3385786102621976 0.19258547533634807 0.199257984172505 8.582447528778928 0.02876301484261169 0.09364879848167988 1.224919884764897e-06 5.911892315170735 -0.32688852077462627 KKFPDRLAEDEGDS(ph)EPEAVGQSR ddPTM_A549_MK2206_60min_R1 4 KKFPDRLAEDEGDSEPEAVGQSR 23 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KKFPDRLAEDEGDS(1)EPEAVGQSR;KKFPDRLAEDEGDS(1)EPEAVGQSR;KKFPDRLAEDEGDS(1)EPEAVGQSR;KKFPDRLAEDEGDS(1)EPEAVGQSR 141.78 1.565e-27 53374300.0 3896.0199999999995 5082.55 5086.2 4372.09 6233.799999999999 4076.0600000000004 3697.35 3187.19 7599.8 7502.3 8123.700000000001 True False 4553.572927456186 5341.230085673723 5807.499640616219 5443.252246270579 5316.816277864925 4507.38596373035 4369.110635726406 3638.983942860012 5878.457434386797 5807.525219426364 6106.361087285968 0.7457097381511165 0.8746993519257612 0.95105735766396 0.8914068736622789 0.87070125756812 0.7381459922367123 0.7155015193620494 0.595933304769141 0.9626776652016716 0.9510615465433564 1.0 12.576097187576279 -8.964824785686789 24.99939931978166 0.9835344144749109 0.8046746084899326 0.3970834358568659 0.09485235667900911 126.96598031509605 90236.62764874002 0.017737841260783177 0.018808915098783702 1.0843643080798439e-09 8.964824785686789 -0.1788598059849783 KKFPDRLAEDEGDS(ph)EPEAVGQSR ddPTM_A549_PD325901_60min_R1 3 KKFPDRLAEDEGDSEPEAVGQSR 23 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KKFPDRLAEDEGDS(1)EPEAVGQSR;KKFPDRLAEDEGDS(1)EPEAVGQSR;KKFPDRLAEDEGDS(1)EPEAVGQSR 173.07 5.2335e-41 77981000.0 5983.650000000001 6174.36 7072.9 6607.58 7706.2 10407.400000000001 8934.800000000001 8653.0 8674.2 8283.7 9831.2 True False 6591.105743069684 6694.694986118304 7552.9095268028395 7015.715209697021 7164.94309694676 10322.645584962478 9274.818703310162 8480.409126852817 8309.65353934305 7760.665768294912 8622.024725111532 0.7644498772861525 0.7764643688181609 0.8760018403571833 0.8136969486139194 0.8310047031156103 1.1972414733279424 1.0757123760382379 0.9835751342899468 0.963770553236909 0.9000978326694049 1.0 13.07381098435602 -7.0383498072075925 24.906514648500213 1.0040998308907265 0.8118128986661172 0.6493550678786748 0.07563641075825737 257.13784516012805 166999.35615798156 0.010755215397808856 0.01863127406725637 9.154828075037089e-08 7.0383498072075925 -0.19228693222460935 KKFS(ph)FK ddPTM_A549_MK2206_60min_R1 2 KKFSFK 6 2 P49006 P49006 MARCKSL1 MARCKS-related protein 1 KKFS(1)FK;KKFS(1)FK 69.825 0.010601000000000001 36685000.0 16464.2 20603.1 17196.0 12609.900000000001 17343.1 14247.3 12341.2 16061.7 18553.6 19821.9 20160.2 True False 19242.954448956683 21651.709787044743 19634.651374314126 15699.32606607992 14791.952964265649 15754.939829407667 14583.436292919721 18338.495161893294 14351.239224011006 15344.119023092577 15153.865946785636 1.2698379751101339 1.428791165441014 1.2956859618042835 1.0359947831932605 0.9761174485909482 1.039664722172729 0.962357483174984 1.2101529224483583 0.9470348539710503 1.0125547551347645 1.0 13.887398270327832 -6.2464546931530345 3.3940603392353315 0.9967696593108792 1.3524435702980904 0.7601450392474932 0.07671396829555654 0.07611787098524185 1.846946030282899 0.01066198387455868 0.029347313488808754 5.669507143640773e-07 6.2464546931530345 0.35567391098721113 KKFS(ph)FK ddPTM_A549_PD325901_60min_R1 2 KKFSFK 6 2 P49006 P49006 MARCKSL1 MARCKS-related protein 1 KKFS(1)FK;KKFS(1)FK 55.531000000000006 0.026062000000000002 48825000.0 19904.8 21038.9 23841.0 19749.2 24894.0 18502.7 17430.4 21460.4 18529.4 21586.8 22057.0 True False 21925.52064286071 22811.921939025964 25458.993627579406 20969.063230312535 23145.531319637783 18352.02014575063 18093.723410280854 21032.3554866419 17750.673755724227 20223.80576397367 19344.128830843136 1.133445751658854 1.1792685076959177 1.3161095984320814 1.084001425635593 1.196514535342296 0.9487126717482028 0.9353599517715897 1.0872733360370812 0.9176259065966189 1.045475138261483 1.0 14.239608137551418 -7.260423728174904 24.98574534655538 0.9677903623101982 1.183744394902021 0.6400800840962637 0.07100768408784967 37.971328210654974 934119.0299201835 0.009948495499346148 0.01661456622274291 5.490049646926597e-08 7.260423728174904 0.21595403259182278 KKGDDS(ph)DEEDLCISNK ddPTM_A549_MK2206_60min_R1 2 KKGDDSDEEDLCISNK 16 2 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 KKGDDS(1)DEEDLCISNK;KKGDDS(0.997)DEEDLCIS(0.003)NK 99.508 4.103100000000001e-07 10874500.0 2884.1000000000004 3373.7 3832.8999999999996 2815.7 4308.0 3407.2999999999997 3095.3 2911.4 4232.3 4527.6 5509.0 True False 3370.865570524892 3545.4069197622125 4376.462854885356 3505.5466264015768 3674.2989067730914 3767.858224417312 3657.6759437878295 3324.0998657885607 3273.690807594312 3504.8120154452363 4140.963259334833 0.8140293355479704 0.8561792746578762 1.0568707280895682 0.8465534241336582 0.8873053627052218 0.9098989748154749 0.883291088261277 0.8027358992609159 0.790562630618502 0.8463760231497967 1.0 12.015750687125836 -11.047057972918783 1.3797822173473346 0.9992698512988631 0.865962918734751 0.0 0.08179703173802799 0.4219428702491861 1.4450725277204197 0.051240267663161636 0.011712514470401114 8.973090068992735e-12 11.047057972918783 -0.1333069325641122 KKGDDS(ph)DEEDLCISNK ddPTM_A549_PD325901_60min_R1 4 KKGDDSDEEDLCISNK 16 2 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK 125.73 6.9963e-09 32756600.0 8591.4 9015.7 10104.1 9006.4 9714.7 11377.5 8985.099999999999 11096.7 9507.100000000002 8399.5 10440.0 True False 9463.592603345598 9775.484679601905 10789.824986889193 9562.704872981534 9032.372985895609 11284.845412198107 9327.032897335379 10875.367613307251 9107.54964883082 7869.154136532365 9155.946184612701 1.0336007237842793 1.0676651525137169 1.1784500224588863 1.0444256311873505 0.9865035031633577 1.2325154806133733 1.0186858582688267 1.1877928718698865 0.9947141961293726 0.8594583211680631 1.0 13.160493267933521 -8.835297715502891 24.999986963159177 0.9975035469427496 1.0925731048037208 0.3257964654242762 0.08432753680309854 36.784501373783655 12450.04951482883 0.011689148982970054 0.012444046798592323 1.4611751731459967e-09 8.835297715502891 0.09506955786097127 KKIEEAMDGSET(ph)PQLFTVLPEK ddPTM_A549_PD325901_60min_R1 1 KKIEEAMDGSETPQLFTVLPEK 22 2 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KKIEEAMDGS(0.077)ET(0.922)PQLFT(0.001)VLPEK 73.805 0.00010813 9675200.0 2964.2 3323.5 3438.3 3849.6 3756.5 4119.6 4024.8 3535.0 3294.5 4084.2 3707.5 True False 3265.123401871292 3603.5830088242656 3671.6437141775227 4087.381048924064 3492.656399221473 4086.0513434490263 4177.96596645507 3464.4916518461473 3156.043621932358 3826.3229149860663 3251.5010037788875 1.0041895721626943 1.1082829144558741 1.129215002520481 1.2570751305854493 1.0741674061186863 1.2566661793123317 1.284934546106382 1.0655053305595548 0.9706420567806717 1.1767866319398708 1.0 11.666890153818267 -8.51676517637676 6.114438022893799 0.9873697214775726 1.1615847888620552 0.13984274381027084 0.09819260666285029 0.09589355916028247 14.902159619640077 0.013392408086213212 0.01566119576736838 3.0425296809825434e-09 8.51676517637676 0.17421506738448256 KKIEEAMDGSET(ph)PQLFTVLPEKR ddPTM_A549_PD325901_60min_R1 2 KKIEEAMDGSETPQLFTVLPEKR 23 3 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 KKIEEAMDGS(0.007)ET(0.993)PQLFTVLPEKR;KKIEEAMDGS(0.016)ET(0.982)PQLFT(0.001)VLPEKR 72.22800000000001 4.5235e-05 13576600.0 2462.6 2188.1 2600.8999999999996 2473.0 3314.7 2676.1000000000004 2615.5 2366.5 2565.6000000000004 2895.1 3137.7 True False 2712.6013391296965 2372.498866137617 2777.4127144822482 2625.751593409499 3081.8869070942146 2654.3067288581283 2715.0342837565163 2319.298301016664 2457.77675411433 2712.3028919191443 2751.7827915190887 0.9857614298228231 0.8621679274431059 1.0093139338766672 0.954200164890189 1.1199600915422891 0.9645771232521045 0.986645563786564 0.842834800829728 0.8931579780530365 0.985652973875111 1.0 11.426150881894873 KKLDDQS(ph)EDEALELEGPLITPGSGSIYSSPGLYSK ddPTM_A549_MK2206_60min_R1 2 KKLDDQSEDEALELEGPLITPGSGSIYSSPGLYSK 35 2 Q96AC1;Q96AC1-3;G3V3J0;Q96AC1-2 Q96AC1 FERMT2 Fermitin family homolog 2 1 KKLDDQS(1)EDEALELEGPLITPGSGSIYSSPGLYSK;KKLDDQS(0.97)EDEALELEGPLIT(0.022)PGS(0.004)GS(0.004)IY(0.001)SSPGLYSK 87.57799999999999 1.8574000000000002e-09 8603100.0 1264.83 1340.22 1339.3600000000001 1316.18 1562.3200000000002 1495.31 1055.07 1487.3400000000001 2372.4 1522.55 1986.05 True False 1478.3023818754561 1408.4314734575437 1529.301387805383 1638.6441590855654 1332.5047975927898 1653.542711693555 1246.7625619527116 1698.1749997877173 1835.0551879443194 1178.604897543101 1492.8589728084853 0.9902491854902783 0.9434457635391307 1.0244111571559498 1.0976550289963543 0.8925858516199796 1.1076349084621024 0.8351509316430624 1.1375320982885444 1.2292220640855762 0.7894951358505188 1.0 10.54386216825932 KKLDDQSEDEALELEGPLITPGSGSIYS(ph)SPGLYSK ddPTM_A549_PD325901_60min_R1 1 KKLDDQSEDEALELEGPLITPGSGSIYSSPGLYSK 35 2 Q96AC1;Q96AC1-3;G3V3J0;Q96AC1-2 Q96AC1 FERMT2 Fermitin family homolog 2 1 KKLDDQSEDEALELEGPLIT(0.001)PGS(0.176)GS(0.176)IY(0.16)S(0.24)S(0.24)PGLY(0.002)S(0.004)K 81.57300000000001 1.7613e-06 5844700.0 1137.8 700.57 1335.5 1081.7 1218.0 1274.0 931.53 1530.4 1411.9 1033.9 1189.0 True False 1253.3086183959103 759.6094925506288 1426.1350610138977 1148.5141522810584 1132.4518818718896 1263.6249663933536 966.9798839027753 1499.8749714244257 1352.562753014508 968.6193775535223 1042.7605376920028 1.2019141241861 0.7284601450606415 1.367653463536737 1.1014169704035077 1.0860133663845828 1.2118074291439929 0.9273268875738654 1.4383695174581295 1.2970981391453562 0.9288991504199219 1.0 10.026192176221931 -5.766430160368502 24.999995229364163 1.1585077125707124 0.9651871626184375 0.12380949939020613 0.1897357999594966 159.15353451587228 797257.1847896107 0.02457959818524328 0.0800162683420214 1.7122605060773887e-06 5.766430160368502 -0.19332054995227488 KKLEFGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KKLEFGSPK 9 2 Q8WYL5;Q8WYL5-4;Q8WYL5-2;Q8WYL5-5 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 KKLEFGS(1)PK;KKLEFGS(1)PK 87.001 0.00023816 27100000.0 5350.9 5855.3 5895.6 4754.5 8944.8 6802.9 5319.0 6404.7 9636.7 8965.3 9689.1 True False 6254.001103055252 6153.309759991605 6731.6847314728 5919.352713437616 7629.031769104912 7522.778362600454 6285.393449748808 7312.585838571129 7454.002836647707 6940.032503328734 7283.02906444384 0.8587087937885131 0.8448833178536127 0.9242973866927521 0.8127597269021253 1.0475080768728875 1.0329188989958977 0.8630191358749967 1.0040583078641807 1.0234756405186642 0.9529046831915535 1.0 12.830322887196631 -6.763073833129818 24.999427263470977 1.003174447024984 0.8636520215645381 0.5603942280319281 0.054010415547617624 21.32661978295259 326204.6023474885 0.007362380047310383 0.01445459368163474 1.7255445122961117e-07 6.763073833129818 -0.1395224254604458 KKLEFGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KKLEFGSPK 9 2 Q8WYL5;Q8WYL5-4;Q8WYL5-2;Q8WYL5-5 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 KKLEFGS(1)PK;KKLEFGS(1)PK 71.607 0.00062175 53544000.0 9776.599999999999 8376.599999999999 9682.7 8620.7 10347.099999999999 10858.2 9213.9 10760.1 9437.7 10067.8 10443.599999999999 True False 10769.113234847475 9082.525479680251 10339.826248805133 9153.181059969786 9620.35539155717 10769.77441922474 9564.540006539544 10545.481364364845 9041.066289485816 9432.117389818502 9159.103407434986 1.1757824708153801 0.9916391458477724 1.1289124916322797 0.9993533922261001 1.050359949397204 1.175854659581884 1.044265970266854 1.151366121252049 0.9871125903160617 1.0298079375500766 1.0 13.160990663229223 -8.78889047800551 24.984392252104804 0.993914256196667 1.0847662799086064 0.2555772454499352 0.06261660144141638 170.87965180036394 155524.01344608504 0.009730267291151963 0.010359825296335905 1.625958744363586e-09 8.78889047800551 0.09085202371193946 KKLELDGEKETAPEEPGS(ph)PAK ddPTM_A549_MK2206_60min_R1 4 KKLELDGEKETAPEEPGSPAK 21 3 P35612 P35612 ADD2 Beta-adducin 1 KKLELDGEKETAPEEPGS(1)PAK;KKLELDGEKETAPEEPGS(1)PAK;KKLELDGEKETAPEEPGS(1)PAK;KKLELDGEKETAPEEPGS(1)PAK 122.78 1.6234000000000001e-15 134288000.0 7706.5 7871.5 9032.4 7786.1 11628.9 8450.4 8412.9 7779.6 12472.199999999999 11905.9 13676.800000000001 True False 9007.168794164587 8272.12572810512 10313.330139180905 9693.694849531314 9918.30421471068 9344.615719078458 9941.415031658527 8882.382124025786 9647.266614010763 9216.348920993338 10280.47309952272 0.8761434135344173 0.8046444602329791 1.0031960629963335 0.9429230304567746 0.9647711850120153 0.9089674792799458 0.9670192154989508 0.8640051910099505 0.9384068729734477 0.89649073848763 1.0 13.327619037333195 -14.125265798987284 0.012201385051667516 2.0436145115896482 3.901489765718045e-07 0.0 0.0588839368492388 5106.450935495189 5.61501935861862 548.3931451962467 402.47303033657164 7.494353959064925e-15 14.125265798987284 -2.0436141214406716 KKLELDGEKETAPEEPGS(ph)PAK ddPTM_A549_PD325901_60min_R1 4 KKLELDGEKETAPEEPGSPAK 21 3 P35612 P35612 ADD2 Beta-adducin 1 KKLELDGEKETAPEEPGS(1)PAK;KKLELDGEKETAPEEPGS(1)PAK;KKLELDGEKETAPEEPGS(1)PAK;KKLELDGEKETAPEEPGS(1)PAK 151.9 8.3631e-23 249128000.0 12910.7 13006.599999999999 15078.099999999999 14374.099999999999 14296.9 16916.4 16854.5 17835.100000000002 15142.9 14259.599999999999 17304.3 True False 14221.384759645009 14102.711828666663 16101.390537981013 15261.955511050344 13292.735065627436 16778.63844701454 17495.907220636287 17479.364939134717 14506.496573853245 13359.246422441436 15175.980800995549 0.9370982308248625 0.9292784442466823 1.0609785785261903 1.0056651831062646 0.8759061598677977 1.10560488096518 1.152868302224562 1.1517782717534846 0.9558852745057251 0.8802888325718669 1.0 13.889502138271384 -5.735154319565826 24.404942160691792 1.0092693653219702 0.9331881894722782 0.11192879961019331 0.09059645456225308 317.8468533552241 295105.3898642411 0.012158917228473337 0.04705769320127391 1.8401180289122758e-06 5.735154319565826 -0.07608117584969198 KKLGAGEGGEAS(ph)VSPEKTSTTSK ddPTM_A549_PD325901_60min_R1 1 KKLGAGEGGEASVSPEKTSTTSK 23 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KKLGAGEGGEAS(0.496)VS(0.496)PEKT(0.003)S(0.002)T(0.002)T(0.002)SK 44.81100000000001 0.010281 2328800.0 368.6 625.1 487.17 627.75 335.8 625.47 717.21 569.64 736.45 668.2 684.12 True False 406.02000065102163 677.7793707886409 520.2322857911947 666.5246917763093 312.2145664471104 620.3763796939179 744.503819022371 558.278083326065 705.4995675738616 626.0097379642747 599.9775769939885 0.6767252914438331 1.1296745024780017 0.867086214117644 1.1109160030875413 0.5203770581083544 1.0339992751097993 1.2408860723637187 0.930498246489733 1.1758765571016172 1.0433885564535808 1.0 9.228764773555767 -7.503171797654424 24.75484827197566 1.0844633738696083 0.8788195167730775 0.2542778985001375 0.17878596613694475 739.2006572801333 928546.4915339214 0.025210475210451243 0.039956591389499134 3.139266621157911e-08 7.503171797654424 -0.20564385709653088 KKLGAGEGGEASVS(ph)PEK ddPTM_A549_MK2206_60min_R1 4 KKLGAGEGGEASVSPEK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KKLGAGEGGEAS(0.004)VS(0.996)PEK;KKLGAGEGGEAS(0.01)VS(0.99)PEK;KKLGAGEGGEAS(0.007)VS(0.993)PEK;KKLGAGEGGEAS(0.127)VS(0.873)PEK 80.156 5.8048000000000004e-05 22846700.0 2182.11 2644.17 2925.4 2635.74 3742.5 2634.84 2601.44 2426.62 3932.8499999999995 3759.3999999999996 4599.85 True False 2550.3968205326014 2778.746958836783 3340.265708910126 3281.496418322866 3191.983207659773 2913.6570199347593 3074.0879744152157 2770.600816212076 3042.065754470921 2910.1489289833057 3457.580295598354 0.737624755607083 0.8036680919237784 0.9660703218266328 0.9490730909417634 0.9231841157017533 0.8426867262183232 0.8890865031619539 0.8013120677889009 0.879825049426502 0.8416721175464958 1.0 11.75554704022193 -10.401937900860512 0.7811520864962316 0.9997559413503381 0.8696038016294191 0.0 0.07945482602471501 0.5957220999321707 0.6648175315886723 0.044106370159557026 0.013457603442421336 3.9633470152938234e-11 10.401937900860512 -0.130152139720919 KKLGAGEGGEASVS(ph)PEK ddPTM_A549_PD325901_60min_R1 3 KKLGAGEGGEASVSPEK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KKLGAGEGGEASVS(1)PEK;KKLGAGEGGEAS(0.032)VS(0.968)PEK;KKLGAGEGGEASVS(1)PEK 106.03 2.2717e-09 34579400.0 3377.92 3848.0699999999997 3393.84 3570.59 3919.52 5034.6 4688.5 4780.9 4350.4 4834.8 5043.4 True False 3720.843951706727 4172.360363702839 3624.166391217825 3791.13723490175 3644.226436809941 4993.599886816312 4866.923433145641 4685.541198956505 4167.567816923522 4529.529902887868 4423.093772746715 0.841231080071835 0.9433126626008265 0.8193736279227105 0.8571234139916225 0.8239089253011468 1.1289834996456147 1.1003437148752353 1.0593357137998933 0.942229134413193 1.0240637290570163 1.0 12.110840113388043 -7.233409600989872 24.99675260640644 0.9997040224626998 0.8597032587076374 0.6502991226210582 0.0636327922794399 503.7991294894405 449284.64659496426 0.01066274826778421 0.018466050764005166 5.8423880456983165e-08 7.233409600989872 -0.14000076375506243 KKLGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A549_MK2206_60min_R1 2 KKLGAGEGGEASVSPEKTSTTSK 23 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KKLGAGEGGEAS(0.001)VS(0.998)PEKTSTTSK;KKLGAGEGGEAS(0.011)VS(0.986)PEKT(0.001)S(0.001)TTSK 88.51799999999999 2.1123000000000002e-07 6291700.0 1172.44 1437.8500000000001 1492.08 1672.46 2246.9300000000003 1580.5500000000002 1648.5300000000002 1255.51 2547.1400000000003 2668.55 2653.7200000000003 True False 1370.3192085940861 1511.0304234460975 1703.6793802388122 2082.212775079581 1916.4095734901719 1747.8027519158215 1948.046562082046 1433.482387338117 1970.21685694676 2065.7227016115335 1994.7280850539169 0.6869704291334761 0.7575119810905229 0.8540910377730819 1.0438579527110332 0.9607372492769469 0.8762110309729654 0.9765975506528204 0.7186354862494305 0.9877119952885737 1.0355911249706486 1.0 10.961976380943831 -5.862032977004728 2.4605152158049974 0.9649095447072481 0.7061952389645605 0.4970582033002313 0.08753344916583539 0.1670629807061278 1.978597748091558 0.01232122312063866 0.054288820277376776 1.3739376447243757e-06 5.862032977004728 -0.2587143057426876 KKLGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A549_PD325901_60min_R1 1 KKLGAGEGGEASVSPEKTSTTSK 23 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KKLGAGEGGEAS(0.059)VS(0.939)PEKT(0.001)S(0.001)TTSK 80.984 9.7491e-06 5244100.0 933.22 604.79 988.6 1105.1 839.11 1303.0 1380.8 1160.5 1121.7 669.66 1122.0 True False 1027.9598073997463 655.7577758106895 1055.6923409347355 1173.3595171358018 780.1738083723488 1292.3888000082732 1433.3470996027515 1137.3529171053615 1074.558849816824 627.3775533151093 984.0011129440093 1.0446734194478886 0.666419750124818 1.0728568566108985 1.1924371849796547 0.7928586645986259 1.3134017665301274 1.456651908974325 1.1558451531650638 1.0920301163093986 0.637578093217876 1.0 9.942516137085068 -5.892629751206416 9.871209441729068 1.0926354482792335 0.8561754379184712 0.12357299740110195 0.2280921130080378 0.34797056078022104 29.69127277125667 0.025397049693584896 0.07919199329883586 1.2804724793360955e-06 5.892629751206416 -0.23646001036076236 KKLT(ph)PEGNK ddPTM_A549_MK2206_60min_R1 1 KKLTPEGNK 9 2 Q9UPU7;C9JW56;Q9UPU7-2 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 KKLT(1)PEGNK 46.592 0.0125 2641600.0 1612.7 1737.6 1552.5 1335.8 2253.4 1362.7 1532.1 1456.6 1748.1 2331.4 2128.5 True False 1884.8843332705171 1826.0364181103314 1772.6678447675429 1663.0710599663398 1921.9278450609302 1506.9000095129477 1810.462738176376 1663.0775106504136 1352.1581411420782 1804.7351207723777 1599.934706388491 1.178100784828425 1.141319336857325 1.1079626172801513 1.0394618313645847 1.2012539245425018 0.9418509414765125 1.131585389670749 1.0394658632066642 0.8451333268432466 1.128005482702591 1.0 10.643797314342454 -8.565093271661539 6.006216937566968 0.9270862611413042 1.101215999898591 0.13880039231020613 0.0954326528206892 0.11673844926576711 10.593960622446629 0.013789337069787131 0.01572355428603383 2.7221166273660636e-09 8.565093271661539 0.17412973875728688 KKPAPGPHS(ph)SPPEEK ddPTM_A549_MK2206_60min_R1 3 KKPAPGPHSSPPEEK 15 2 O75182-2;O75182;M0QYC5 O75182-2 SIN3B Paired amphipathic helix protein Sin3b 1 KKPAPGPHS(0.583)S(0.417)PPEEK;KKPAPGPHS(0.5)S(0.5)PPEEK;KKPAPGPHS(0.591)S(0.409)PPEEK 101.96 1.4032e-06 47048000.0 3672.2 3961.1 3222.24 3019.26 4221.9 3596.6 3589.5 3141.8999999999996 4375.299999999999 5709.3 4634.200000000001 True False 4291.9775833298145 4162.7030707739605 3679.202084459751 3758.9788355397313 3600.8641027171125 3977.1898247701415 4241.665686759418 3587.2739466652047 3384.301535918386 4419.5651647189425 3483.400242586581 1.2321230075309486 1.1950114201298232 1.0562099753796246 1.0791119520473251 1.033721034607068 1.1417550519020747 1.2176796782932389 1.0298196293405242 0.9715511569825781 1.2687503177749155 1.0 11.766280532728931 -8.469598101796707 6.722540503592626 0.9871924728538539 1.1296767782908965 0.0 0.10423694235532067 0.14105053119093813 14.533808238037622 0.01048743909634433 0.012618532802084496 3.3915786928518434e-09 8.469598101796707 0.1424843054370426 KKPAPGPHS(ph)SPPEEK ddPTM_A549_PD325901_60min_R1 3 KKPAPGPHSSPPEEK 15 2 O75182-2;O75182;M0QYC5 O75182-2 SIN3B Paired amphipathic helix protein Sin3b 1 KKPAPGPHS(0.5)S(0.5)PPEEK;KKPAPGPHS(0.851)S(0.149)PPEEK;KKPAPGPHS(0.5)S(0.5)PPEEK 88.992 9.1224e-06 84438000.0 3392.62 2802.6400000000003 2885.04 3003.0200000000004 3886.12 3395.9500000000003 2917.08 3229.46 4169.69 4551.13 4076.11 True False 3737.036284885158 3038.8283086659353 3080.836163554873 3188.509725046744 3613.1723375861984 3368.294509123635 3028.091075687427 3165.0458868376404 3994.4524297875673 4263.770875099293 3574.7743105902014 1.0453908303565511 0.8500755697117616 0.8618267604832994 0.8919471407190221 1.0107413849546372 0.9422397657790944 0.8470719582818876 0.8853834149644781 1.1173998923383994 1.1927384793126528 1.0 11.803636446477503 -8.753011638246416 24.99968638373314 1.0554388394243146 0.9135977588438025 0.5116889510429968 0.07734004122094157 121.44131256210805 360238.19127432664 0.012146171613770157 0.013662512942140787 1.7659904949456845e-09 8.753011638246416 -0.14184108058051215 KKPAPGPHSS(ph)PPEEK ddPTM_A549_MK2206_60min_R1 1 KKPAPGPHSSPPEEK 15 2 O75182-2;O75182;M0QYC5 O75182-2 SIN3B Paired amphipathic helix protein Sin3b 1 KKPAPGPHS(0.06)S(0.94)PPEEK 112.3 3.7774e-07 14858000.0 1038.9 1337.3 1098.2 765.46 1322.3 1182.3 1267.1 979.76 1840.9 1651.2 1675.4 True False 1214.2409213336266 1405.362857929871 1253.9412735096394 952.9977343628052 1127.7914216402178 1307.410201252777 1497.315668391937 1118.64398038916 1423.939089313226 1278.1927731917958 1259.351941312321 0.9641791793867519 1.1159413122160258 0.9957036094318135 0.7567366223056946 0.895533158479107 1.0381611036311074 1.1889572876916703 0.8882695485611951 1.1306919397205162 1.0149607359638018 1.0 10.298465802851442 -7.394167851222419 6.434015474461881 1.058489739064386 0.9478234430478586 0.16538733403090278 0.1073106738213505 0.3272912058522639 15.848375615515986 0.01679987263959941 0.02692476514407685 4.034894175079178e-08 7.394167851222419 -0.11066629601652733 KKPAPGPHSS(ph)PPEEK ddPTM_A549_PD325901_60min_R1 1 KKPAPGPHSSPPEEK 15 2 O75182-2;O75182;M0QYC5 O75182-2 SIN3B Paired amphipathic helix protein Sin3b 1 KKPAPGPHS(0.101)S(0.899)PPEEK 72.819 0.00020217 29638000.0 583.77 633.6 662.97 578.57 924.76 570.35 879.2 615.97 582.08 684.43 723.34 True False 643.0339006512395 686.9956956193931 707.9631309624732 614.3069548721934 859.8080478488085 565.7052586989398 912.6584371166999 603.6839951308833 557.617201837726 641.2149729944456 634.3737656300532 1.0136514709314708 1.0829509870053917 1.116003166145012 0.9683675274025091 1.3553650772346433 0.8917538671182083 1.4386761977936735 0.9516219425172964 0.8790041960261498 1.010784190228292 1.0 9.309189299754173 -8.474032629963387 24.999427244476674 0.9414127792987993 1.1216087113844726 0.20607028745235278 0.15279523831419994 381.42964803808906 195215.8621355166 0.022683461215548158 0.02742269864623271 3.357123901266445e-09 8.474032629963387 0.1801959320856733 KKPAPLPPS(ph)SSPGPPSQDSR ddPTM_A549_PD325901_60min_R1 1 KKPAPLPPSSSPGPPSQDSR 20 2 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KKPAPLPPS(0.333)S(0.333)S(0.333)PGPPS(0.002)QDSR 41.76 0.025845999999999997 831130.0 286.88 245.12 0.0 310.02 484.75 334.45 303.3 242.03 218.72 275.2 403.38 True False 316.0038464101061 265.777122648715 0.0 329.16923129349505 450.70283229671463 331.7263500865441 314.84224747212846 237.2025217811381 209.52795901928846 257.8238250340743 353.7668172365011 0.8932546270976298 0.7512777052547499 0.0 0.9304694936196857 1.2740110443863637 0.9376977543509332 0.8899711112861366 0.6705052882971861 0.5922770277213827 0.7287959539227028 1.0 8.466654921654255 KKPAPLPPSS(ph)SPGPPSQDSR ddPTM_A549_MK2206_60min_R1 2 KKPAPLPPSSSPGPPSQDSR 20 2 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KKPAPLPPS(0.2)S(0.397)S(0.397)PGPPS(0.005)QDS(0.001)R;KKPAPLPPS(0.083)S(0.456)S(0.456)PGPPS(0.004)QDS(0.001)R 51.348 0.0026538 23749000.0 1749.5300000000002 1703.39 1871.6 1781.1100000000001 2696.6 1622.81 1943.65 1517.44 2529.7 2805.5 2496.01 True False 2044.8078920982005 1790.0852752330538 2137.0210230382827 2217.482029957066 2299.9337121644185 1794.5346770659035 2296.78604598689 1732.5417669651006 1956.7269891008034 2171.7356014956285 1876.1818306284883 1.0898772489515183 0.9541107615531094 1.139026606137859 1.181912112012218 1.2258586425996785 0.9564822810722804 1.2241809447741567 0.9234402224142257 1.0429303584319083 1.1575293855010496 1.0 10.873583938439625 -8.272010965091923 24.975913531545668 1.013576681260036 1.1066052408167035 0.11704005215134972 0.10033214125646815 860.3342101741702 2032580.3798499783 0.014343917799297888 0.017423885871621178 5.345508628558276e-09 8.272010965091923 0.09302855955666756 KKPAPLPPSS(ph)SPGPPSQDSR ddPTM_A549_PD325901_60min_R1 1 KKPAPLPPSSSPGPPSQDSR 20 2 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KKPAPLPPS(0.066)S(0.467)S(0.467)PGPPSQDSR 72.532 0.00011365 13231000.0 2895.6 3302.9 2909.3 3291.7 3631.0 4034.5 3455.3 3302.3 3532.1 3217.5 4049.5 True False 3189.559180371944 3581.2469745285566 3106.742593042104 3495.0208330068945 3375.971086269976 4001.6443696342135 3586.7933323127095 3236.4330358957645 3383.6581202086177 3014.346500898016 3551.437171895514 0.8981037889710367 1.008393729408743 0.8747846132904944 0.9841145045912474 0.9505929354419956 1.1267676087025946 1.0099554514710236 0.9113023486681529 0.9527574208507404 0.8487680775411731 1.0 11.79418724764137 -6.41486405371325 24.99631227672164 0.9838686649561916 0.9342606269302334 0.05773807136955955 0.07217064372474671 47.355033223266865 10932.228769051966 0.008364104854556409 0.019436422759595114 3.847121888450347e-07 6.41486405371325 -0.049608038025958257 KKPAPLPPSSS(ph)PGPPSQDSR ddPTM_A549_PD325901_60min_R1 1 KKPAPLPPSSSPGPPSQDSR 20 2 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KKPAPLPPS(0.048)S(0.208)S(0.742)PGPPS(0.002)QDS(0.001)R 62.193000000000005 0.00044782 12797000.0 3050.3 2958.3 3106.3 2915.6 2812.7 3176.0 3119.6 2720.5 3267.1 3175.9 3364.8 True False 3359.964210487822 3207.606323154755 3317.112197699341 3095.6899901919674 2615.1456552882296 3150.1357089994426 3238.3180851106213 2666.2374933090377 3129.795148646292 2975.3731319975145 2950.9509312246014 1.1386038903376432 1.086973791808746 1.124082465282738 1.0490482770946319 0.8862043850397006 1.0674985055384105 1.0973812037487072 0.9035180711061801 1.0606056222519 1.008276044347094 1.0 11.526964216320692 -6.389931233623737 4.871475204024484 1.018082333847406 1.1128167923674566 0.36888146908333386 0.06265076371162653 0.20800160635593262 7.356444491619605 0.008658455529555362 0.020586946755117467 4.0744478768077404e-07 6.389931233623737 0.09473445852005047 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDT(ph)TGSPTEFLEEK ddPTM_A549_PD325901_60min_R1 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816;P27816-6;P27816-2;P27816-5;H7C456 P27816 MAP4 Microtubule-associated protein 4 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(0.039)DT(0.715)T(0.135)GS(0.111)PTEFLEEK 137.36 1.703e-31 167300000.0 1673.9 1370.9 1477.6 2257.4 2092.3 2126.7 2109.1 2452.3 2198.0 1703.7 3352.5 True False 1843.8330957399485 1486.430554173969 1577.8788215306129 2396.8344710726265 1945.344066043148 2109.380860305137 2189.3629546438033 2403.3869527078655 2105.6257037508967 1596.1280912447398 2940.163753248475 0.6271191846722032 0.5055604649678673 0.536663585416722 0.8152044145243459 0.6616448025705409 0.7174365230421477 0.7446398018562264 0.8174330256443896 0.716159330045638 0.5428704742996844 1.0 11.52168079326811 -14.999999999988782 0.08423413554015215 2.0657066388331633 0.37157777240626527 0.0 0.15015675180953617 52.58813968366508 0.3257581289697361 10.360238739278554 0.952300010276861 1.0000000000258298e-15 14.999999999988782 -1.694128866426898 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTT(ph)GSPTEFLEEK ddPTM_A549_PD325901_60min_R1 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816;P27816-6;P27816-2;P27816-5;H7C456 P27816 MAP4 Microtubule-associated protein 4 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(0.009)DT(0.074)T(0.535)GS(0.378)PT(0.005)EFLEEK 166.03 9.4038e-54 80965000.0 405.63 892.86 969.3 1084.3 1188.8 1704.1 1080.8 1297.3 932.71 1098.9 1492.8 True False 446.80925899097656 968.1044456924429 1035.082526874407 1151.27474837603 1105.3027891373579 1690.2223745925537 1121.9304354364529 1271.4243337878381 893.5114422863963 1029.5152664605532 1309.1950636388733 0.3412854748696363 0.7394653956314363 0.7906251372483962 0.8793760229862859 0.8442613479348126 1.2910393733800256 0.8569620116944809 0.9711496545472358 0.682489162312379 0.7863727072106753 1.0 10.35446435244067 -5.125881885193693 1.3889523039347325 0.8874748943813113 4.943557851833376e-13 0.5487808658453355 0.1483820400456327 1.1570624079252698 1.5447896098217626 0.02395356760084061 1.5595942575746733 7.483730073880853e-06 5.125881885193693 -0.887474894380817 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGS(ph)PTEFLEEK ddPTM_A549_MK2206_60min_R1 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816;P27816-6;P27816-2;P27816-5;H7C456 P27816 MAP4 Microtubule-associated protein 4 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTT(0.001)GS(0.998)PT(0.001)EFLEEK 150.2 1.0904999999999998e-41 16564000.0 609.55 701.0 424.82 530.58 813.41 569.47 591.77 814.31 1034.5 1229.9 1093.4 True False 712.4271379333067 736.677905786914 485.06586397046567 660.5721238186412 693.758466517711 629.7309374164076 699.2869490050479 929.7409362197848 800.1874017570382 952.0647357973528 821.878603695173 0.8668276978257231 0.8963342061404252 0.5901916192848987 0.8037344211769275 0.8441130641417932 0.7662091878108667 0.8508397053543528 1.131238764508118 0.973607778763663 1.1584006829194262 1.0 9.682781504872967 -8.055211579938842 7.3330746134845555 0.9979254483029559 0.7937417874772245 0.6050318639695829 0.09762496383072583 0.14413590935198745 16.837704420723608 0.013266477197431556 0.01722512743384865 8.80619747440993e-09 8.055211579938842 -0.20418366082573147 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGS(ph)PTEFLEEK ddPTM_A549_PD325901_60min_R1 2 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816;P27816-6;P27816-2;P27816-5;H7C456 P27816 MAP4 Microtubule-associated protein 4 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDT(0.032)T(0.032)GS(0.932)PT(0.003)EFLEEK;KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDT(0.002)T(0.038)GS(0.952)PT(0.008)EFLEEK 207.92 5.227799999999999e-118 78057000.0 5269.9 5707.2 5808.799999999999 7516.4 8032.799999999999 7142.299999999999 7101.3 9162.5 6738.5 8502.2 8294.8 True False 5804.896368504662 6188.16577342014 6203.020099152017 7980.670957017049 7468.603839655591 7084.135476822014 7371.5438574804675 8979.7467496578 6455.304278764975 7965.369641005475 7274.592185069483 0.7979686312063989 0.8506546643426767 0.8526966105238474 1.097060942247283 1.0266697636995104 0.9738189161121134 1.013327437462401 1.2343986468530854 0.8873767923395031 1.09495755065882 1.0 12.82865065720959 -6.104963760382814 7.4896001209674115 0.9866654032363563 0.8309844427538123 0.41518165560144515 0.09501225391246791 0.24013524550746806 15.083192234662203 0.013813296394600593 0.036869183648083066 7.853011611762545e-07 6.104963760382814 -0.15568096048254398 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK ddPTM_A549_MK2206_60min_R1 2 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816;P27816-6;P27816-2;P27816-5;H7C456 P27816 MAP4 Microtubule-associated protein 4 0 ; 86.787 7.4681e-11 13755300.0 1645.9 1724.6999999999998 1909.17 1605.02 2020.8899999999999 1762.38 1503.72 1676.9299999999998 2746.5 2315.1 3155.5 False True 1923.687681608448 1812.4798632106842 2179.919013974137 1998.249972052085 1723.6197580567957 1948.8738818268364 1776.9264595330458 1914.6399628827405 2124.4221352592617 1792.1173020932195 2371.902262630435 0.8110315976827317 0.7641460998484177 0.9190593762310473 0.8424672481386437 0.7266824545060743 0.8216501634707069 0.7491566948304345 0.8072170565575534 0.8956617516369674 0.7555611925196972 1.0 11.21182884761367 -9.34418223376654 0.9419711148678598 0.9785537775059231 0.8043318014274363 0.0 0.08444202025114682 0.2100283050778588 0.39453924296827864 0.014919243131767573 0.011500224085978047 4.5270757997990624e-10 9.34418223376654 -0.17422197607848677 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK ddPTM_A549_PD325901_60min_R1 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816;P27816-6;P27816-2;P27816-5;H7C456 P27816 MAP4 Microtubule-associated protein 4 0 70.40100000000001 7.0855999999999995e-06 5613800.0 1088.4 1125.6 1149.4 1038.1 1496.5 1480.8 1566.2 1604.9 1328.6 1466.0 2307.5 False True 1198.8935667622688 1220.4582622935434 1227.405195903687 1102.2210793038425 1391.3910026447315 1468.7408557576755 1625.8025980575248 1572.889010480306 1272.7635623309548 1373.436509810874 2023.6921284476846 0.5924288333729426 0.6030849481189223 0.6065177497355755 0.5446584803140606 0.6875507312033808 0.7257728757804202 0.8033843563470451 0.7772373022406445 0.6289314191814616 0.67867858480252 1.0 10.982774109009412 -14.999999999987224 0.20287118057430956 2.616657527905522 0.5988085483320768 0.10260155198178 0.11657177163036823 17.666668952142672 0.20935952883548611 11.38642351497778 0.06474758833852216 1.0000000000294169e-15 14.999999999987224 -2.0178489795734453 KKPDS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 KKPDSPPK 8 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KKPDS(1)PPK;KKPDS(1)PPK 63.283 0.0020469 18885900.0 2880.6 3098.1 2660.6 1807.97 2982.1000000000004 2659.6000000000004 2134.27 2382.8 3009.1 4130.7 3855.1 True False 3366.774856091679 3255.780056944988 3037.913087142367 2250.9227311628583 2543.4370403639828 2941.0371067004016 2522.039232561644 2720.569197018955 2327.5436545452917 3197.5720011042577 2897.7722746526997 1.1618493577088247 1.123545865016324 1.0483615685454315 0.7767769575449587 0.8777215044162902 1.0149303768367675 0.8703372775777946 0.9388485150528322 0.8032182773314199 1.1034586910344737 1.0 11.500728507873628 -6.030090136143474 4.848359319333383 0.9033467145280532 1.1332278966324958 0.46303334705633925 0.09152526522181727 0.10341812916633844 6.208291266723579 0.011743752004510296 0.034290238795896336 9.330606275677006e-07 6.030090136143474 0.22988118210444264 KKPDS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 KKPDSPPK 8 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KKPDS(1)PPK;KKPDS(1)PPK 62.303000000000004 0.0021417 27567000.0 3930.2 4043.6 3408.6000000000004 3255.0 4420.4 3203.4 2615.2 2755.5 3882.5 4528.7 4625.9 True False 4329.191010739677 4384.3683630154355 3639.9280935769143 3456.0539573586434 4109.926353552133 3177.3125724838865 2714.72286709235 2700.5393908520687 3719.332026757439 4242.757109127226 4056.9436259961567 1.0671065239849546 1.0807072434828033 0.8972094337848121 0.8518861182129518 1.0130597643054424 0.7831788817878181 0.6691546931283195 0.665658594205624 0.9167817868911552 1.0458013470880911 1.0 11.986177540112152 -5.761827214798186 24.981899918149647 0.9020908729274809 1.073906926774927 0.2567609574392523 0.1242084769802285 11.948790121253035 769956.6797345022 0.01886807773454072 0.0645095800722492 1.730504708124643e-06 5.761827214798186 0.17181605384744614 KKPEDS(ph)PSDDDVLIVYELTPTAEQK ddPTM_A549_PD325901_60min_R1 2 KKPEDSPSDDDVLIVYELTPTAEQK 25 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KKPEDS(0.715)PS(0.284)DDDVLIVY(0.001)ELTPTAEQK;KKPEDS(0.499)PS(0.499)DDDVLIVY(0.002)ELTPTAEQK 55.881 0.00077854 4312100.0 2234.2799999999997 2629.3 2264.84 2075.25 1880.7800000000002 2700.5 2086.04 2299.6000000000004 2118.07 2543.8 2617.5 True False 2461.1024608099983 2850.880338529151 2418.545661989304 2203.4334792652917 1748.6805011387614 2678.508023347922 2165.4253937248886 2253.7326739987006 2029.0548836868338 2383.184033872377 2295.564093699593 1.0721122828000065 1.2419084034088526 1.0535735720153694 0.959865806105278 0.7617650519705337 1.1668190971880756 0.9433086184211179 0.9817772808802409 0.8839025184510333 1.0381692414571502 1.0 11.164632998294445 -6.045833657390386 3.6107107507800453 0.9505211106099347 1.1573858928880196 0.3345436540855664 0.10150065641730284 0.16000591135362097 4.245579421772306 0.013226552956028113 0.04085868771760773 8.998421712944467e-07 6.045833657390386 0.2068647822780849 KKPEDSPSDDDVLIVYELT(ph)PTAEQK ddPTM_A549_MK2206_60min_R1 2 KKPEDSPSDDDVLIVYELTPTAEQK 25 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KKPEDSPSDDDVLIVY(0.059)ELT(0.902)PT(0.038)AEQK;KKPEDSPSDDDVLIVY(0.012)ELT(0.983)PT(0.004)AEQK 99.34 7.638200000000001e-10 5489900.0 1840.45 2249.8 2433.9 2150.21 4085.5 2489.5 3022.8 3153.7 3897.1000000000004 2875.5 3939.6 True False 2151.0729653176177 2364.305210327246 2779.063618280015 2677.0115465265944 3484.528362029124 2752.9372376036445 3572.00363224303 3600.7466328011906 3014.4130723899048 2225.922552878518 2961.288592571338 0.7263976130910644 0.7984041866970754 0.9384642973506698 0.9040022486299112 1.1766932715610294 0.929641658198947 1.2062328680844299 1.2159391157734478 1.0179396496349036 0.7516736323715452 1.0 11.53200937996752 -5.849185533463238 1.1975608173809804 1.0418552073892748 0.7042139667696725 0.3860902897108509 0.13060601280565012 0.4052321530691971 0.8621582439811808 0.01488677621847148 0.13033629286818635 1.4151890727055265e-06 5.849185533463238 -0.3376412406196023 KKPEDSPSDDDVLIVYELT(ph)PTAEQK ddPTM_A549_PD325901_60min_R1 1 KKPEDSPSDDDVLIVYELTPTAEQK 25 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KKPEDSPSDDDVLIVY(0.003)ELT(0.994)PT(0.003)AEQK 118.05 2.3753000000000003e-17 6290100.0 1919.0 2311.1 2290.3 2299.9 2296.0 2222.8 2502.8 2366.5 2323.1 2216.1 2692.4 True False 2113.8154673068666 2505.864507806155 2445.733530692722 2441.959599548123 2134.736880769998 2204.698253766991 2598.0454235847105 2319.298301016664 2225.4681857978635 2076.175067798008 2361.2518685298123 0.8952096536075979 1.0612440549878244 1.0357783357586121 1.0341800602019477 0.9040699593386243 0.9336988921642245 1.1002830567170003 0.9822324894382106 0.9424950448778292 0.8792687876582596 1.0 11.205336222924277 KKPEEEGS(ph)AHQDTAEK ddPTM_A549_PD325901_60min_R1 2 KKPEEEGSAHQDTAEK 16 2 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KKPEEEGS(1)AHQDTAEK;KKPEEEGS(1)AHQDTAEK 77.514 8.4941e-05 4778700.0 712.11 874.02 1016.48 1056.5700000000002 1184.78 863.89 776.86 914.2 1063.29 968.51 1218.0 True False 784.4028829723252 947.6767327734563 1085.4644453907945 1121.8319292554293 1101.5651400691108 856.8547662618168 806.4238324141038 895.9655638239735 1018.6036189905774 907.3581133130493 1068.1937215381488 0.7343264308301887 0.8871768422387338 1.0161681570528018 1.0502139327687154 1.0312409798504607 0.8021529699949802 0.7549415580283428 0.8387669256600996 0.95357574047883 0.8494321722903373 1.0 10.060957594382607 -8.987999234458488 4.3768624815133625 0.9806671419806876 0.8960047638142016 0.0 0.10977536060605621 0.3496064106812354 14.584787619945791 0.020272418670224043 0.020731321728191077 1.0280181102375576e-09 8.987999234458488 -0.08466237816648603 KKPGDASSLPDAGLS(ph)PGSQVDSK ddPTM_A549_MK2206_60min_R1 3 KKPGDASSLPDAGLSPGSQVDSK 23 2 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 KKPGDASSLPDAGLS(0.983)PGS(0.017)QVDSK;KKPGDASSLPDAGLS(1)PGSQVDSK;KKPGDASSLPDAGLS(1)PGSQVDSK 141.49 1.1172000000000002e-27 49365900.0 4770.88 5891.08 6504.77 5640.73 7851.4 5354.84 5107.05 6752.3 8501.5 9348.099999999999 9304.8 True False 5576.087907182762 6190.910809162867 7427.244197493446 7022.709103221994 6696.469460686684 5921.485614544886 6034.934878274043 7709.459203051483 6575.9238241058165 7236.357717462582 6994.161360584269 0.7972489652021633 0.8851541292787244 1.0619206241580048 1.0040816534200379 0.9574370843693666 0.8466326853588956 0.8628532524691287 1.1022707091801298 0.940201903428274 1.0346283627717276 1.0 12.771935365145719 KKPGDASSLPDAGLS(ph)PGSQVDSK ddPTM_A549_PD325901_60min_R1 3 KKPGDASSLPDAGLSPGSQVDSK 23 2 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 KKPGDASSLPDAGLS(0.992)PGS(0.008)QVDSK;KKPGDASSLPDAGLS(0.998)PGS(0.002)QVDSK;KKPGDASSLPDAGLS(1)PGSQVDSK 205.0 7.310299999999998e-62 76035000.0 7330.3 8207.599999999999 8804.2 8361.0 10275.0 9448.4 8199.4 8716.2 7510.2 8141.799999999999 8723.7 True False 8074.466659718352 8899.283256574701 9401.70595595549 8877.439980791278 9553.319446825662 9371.455363007033 8511.43265388384 8542.348553273378 7194.572411424015 7627.725358511717 7650.740204090598 1.0553837203099905 1.1631924518645331 1.2288622675919263 1.160337397948084 1.2486791071166967 1.2249083242947427 1.1124979318122785 1.1165388348575822 0.9403759923225878 0.9969918145218712 1.0 12.901383619017745 -8.536067453146044 2.3315820140436765 0.9717068939654746 1.1783099733094835 0.6908607489883207 0.055212966300710625 0.11040778455026028 1.1947586974394317 0.009973660273563941 0.011655703213423262 2.910265070461517e-09 8.536067453146044 0.2066030793440089 KKPNATRPVT(ph)PPR ddPTM_A549_MK2206_60min_R1 4 KKPNATRPVTPPR 13 3 F8W0W8;P36873;P36873-2 F8W0W8 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit 1 KKPNAT(0.013)RPVT(0.987)PPR;KKPNAT(0.007)RPVT(0.993)PPR;KKPNAT(0.113)RPVT(0.887)PPR;KKPNATRPVT(1)PPR 86.641 9.2043e-05 280017000.0 6510.41 6666.5599999999995 6679.2 5190.94 8398.8 6090.360000000001 6160.259999999999 6254.0 8987.0 9168.9 9293.7 True False 7609.208043757489 7005.859428819984 7626.410994377695 6462.720533030151 7163.3476458230825 6734.837852746224 7279.499502302987 7140.523652071742 6951.458849290004 7097.6391219223915 6985.81779692869 1.0892365453766732 1.0028689027503845 1.0916990989559792 0.9251201106148921 1.0254128942458882 0.9640729329796135 1.042039702997037 1.0221457042883466 0.9950816141162754 1.0160069054539131 1.0 12.770213299725903 -6.234836701067641 24.997688034218783 0.9982413199905917 1.0554282479666555 0.3552993323372132 0.03728509516777968 616.6050123115406 579403.3005329747 0.004496816017217449 0.011893683699571162 5.823221353747826e-07 6.234836701067641 0.05718692797606373 KKPNATRPVT(ph)PPR ddPTM_A549_PD325901_60min_R1 4 KKPNATRPVTPPR 13 3 F8W0W8;P36873;P36873-2 F8W0W8 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit 1 KKPNAT(0.038)RPVT(0.962)PPR;KKPNATRPVT(1)PPR;KKPNAT(0.201)RPVT(0.799)PPR;KKPNAT(0.001)RPVT(0.999)PPR 111.43 1.9293e-05 356051000.0 10324.099999999999 10670.4 10249.529999999999 9332.3 12169.9 11357.800000000001 10718.500000000002 11599.1 11477.199999999999 12065.7 12122.599999999999 True False 11372.19503179927 11569.632055772061 10945.12474123083 9908.734975808926 11315.128207875792 11265.305842466592 11126.398382888263 11367.746851182083 10994.853197038121 11303.86964285475 10631.597051492912 1.0696600874468207 1.0882308650088868 1.0294901780249366 0.9320081383650182 1.0642924250300567 1.0596061709171618 1.0465406400373187 1.0692416949329169 1.0341675990715054 1.0632334528957186 1.0 13.37607071068049 -10.076363946063527 0.8877628411958467 1.0029725485088326 1.0429047945692214 0.0 0.0430256180876523 0.828623312774666 1.3088977615747186 0.017278369316497174 0.00797540378977966 8.387567996464622e-11 10.076363946063527 0.03993224606038881 KKPPVS(ph)PPLLLVQDSETTGR ddPTM_A549_MK2206_60min_R1 2 KKPPVSPPLLLVQDSETTGR 20 2 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 KKPPVS(1)PPLLLVQDSETTGR;KKPPVS(1)PPLLLVQDSETTGR 90.46799999999999 7.9596e-07 3555900.0 1991.8700000000001 2118.1 2879.5 1997.0700000000002 2849.6 2199.92 1930.93 2352.1000000000004 3601.3 2669.8 3649.1 True False 2328.0489594540472 2225.902242863427 3287.8563987169982 2486.3522396518797 2430.4276148422937 2432.71407421129 2281.754986637237 2685.517378004146 2785.6113000943687 2066.690325743371 2742.927759963467 0.848745998139249 0.8115059664907376 1.1986667847062764 0.9064592498363848 0.8860705886306917 0.8869041721476804 0.8318684217434977 0.9790696704458284 1.0155613067007898 0.7534614494444057 1.0 11.421500911327 -8.506600628966417 22.421186488624002 1.0068203676207355 0.9146860060217176 0.0 0.1237556446656114 257.54600831766396 354739.6156810589 0.015960506725515734 0.019005280632995843 3.114579143323682e-09 8.506600628966417 -0.09213436159901789 KKPPVS(ph)PPLLLVQDSETTGR ddPTM_A549_PD325901_60min_R1 2 KKPPVSPPLLLVQDSETTGR 20 2 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 KKPPVS(1)PPLLLVQDSETTGR;KKPPVS(1)PPLLLVQDSETTGR 78.837 5.2139e-05 5745800.0 2899.1000000000004 3027.5 2982.0 2830.2 3829.3 3286.8 2912.2 3338.5 3915.1 3601.1 3405.2 True False 3193.4144977953824 3282.6380500121736 3184.3764522227198 3005.015026149439 3560.343178367838 3260.033390535067 3023.025364616987 3271.910998497416 3750.561962126993 3373.7259314324274 2986.3819873413 1.069325528794258 1.0992023337693055 1.066299108995661 1.0062393353854668 1.1921928251172988 1.0916330879149831 1.012270157478518 1.0956103446800909 1.2558882212740718 1.1297034156156192 1.0 11.54418299668394 -8.53070848889011 24.9371826881815 1.1237262624943314 1.0776762154758934 0.09019730313947738 0.07145454528426143 508.69436810949344 1620146.7862564088 0.016861132020606906 0.019134780643900517 2.9463986788391475e-09 8.53070848889011 -0.046050047018437956 KKPS(ph)SEERETEISLK ddPTM_A549_MK2206_60min_R1 2 KKPSSEERETEISLK 15 3 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 KKPS(0.5)S(0.5)EERETEISLK;KKPS(0.781)S(0.217)EERET(0.001)EISLK 111.18 7.0095e-07 36495000.0 5049.299999999999 4988.7 4834.4 5247.8 7059.2 5550.8 5279.3 5517.5 8442.2 7999.700000000001 7118.9 True False 5901.498396467303 5242.6035215394795 5519.990614327994 6533.511235582691 6020.801031265696 6138.181971677168 6238.480473633931 6299.62252163508 6530.0551794231715 6192.562213967061 5351.08065835519 1.102861043077848 0.9797279944479375 1.031565578386315 1.2209704268578443 1.1251560975566315 1.1470920293628906 1.1658356268454209 1.1772617390468287 1.220324565511291 1.1572545078904726 1.0 12.38561455991645 -6.1645438261309815 24.997824416760736 1.1266100460561062 1.0322177507283898 0.3293499940890561 0.06531561791361097 65.28413975912329 16836.284520858764 0.01245602625316183 0.032955561903534554 6.846303912273422e-07 6.1645438261309815 -0.09439229532771631 KKPS(ph)SEERETEISLK ddPTM_A549_PD325901_60min_R1 3 KKPSSEERETEISLK 15 3 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 KKPS(0.5)S(0.5)EERETEISLK;KKPS(0.5)S(0.5)EERETEISLK;KKPS(0.499)S(0.499)EERET(0.002)EISLK 137.05 2.7387e-10 91590000.0 11791.2 12077.0 13555.5 13470.699999999999 16938.8 13771.1 12527.7 13699.099999999999 15023.0 15215.7 15278.900000000001 True False 12988.233943777337 13094.771174235193 14475.45774584341 14302.754544820596 15749.077123687654 13658.95272739365 13004.44847892048 13425.860703763943 14391.635553889759 14254.978105272403 13399.692160927114 0.9692934574758687 0.9772441797147358 1.0802828581430535 1.0673942634687363 1.1753312639234532 1.0193482479562126 0.970503525210889 1.0019529211956926 1.0740273269751006 1.0638287756221194 1.0 13.709912236724639 -11.135795910263141 1.5050666027059754 1.0000189953152978 1.0431839402588252 0.0 0.06146243144764345 1.0477825803449698 4.254405443281817 0.04473171282199047 0.00961901580056091 7.314827513313138e-12 11.135795910263141 0.043164944943527406 KKPSS(ph)EERETEISLK ddPTM_A549_MK2206_60min_R1 1 KKPSSEERETEISLK 15 3 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 KKPS(0.106)S(0.894)EERETEISLK 140.95 5.8274e-14 28732000.0 3643.8 4210.7 3854.6 3652.7 4679.3 4098.3 3476.4 3952.3 5607.0 5935.8 5318.7 True False 4258.784357643147 4425.0066446461615 4401.240241185811 4547.611663975934 3990.981168631227 4531.979385768632 4108.016880749531 4512.550628411118 4337.023452539117 4594.898657407858 3997.920001347645 1.0652500190618042 1.1068272109383257 1.1008825188353475 1.1374944127053555 0.9982643893039181 1.1335843099013894 1.0275385398819321 1.1287245935111252 1.0848199691532507 1.1493223115667595 1.0 11.965033888607124 -10.568707778577487 0.6731263253031359 0.9936222158209201 1.0884552175169393 0.0 0.06070647789616496 0.6693688827001707 0.4917891311960145 0.03566702047760665 0.007807219071195361 2.6995552568889956e-11 10.568707778577487 0.09483300169601916 KKPSS(ph)EERETEISLK ddPTM_A549_PD325901_60min_R1 1 KKPSSEERETEISLK 15 3 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 KKPS(0.156)S(0.823)EERET(0.022)EISLK 85.20299999999999 2.2576e-05 11710000.0 2445.7 2877.8 3217.7 2699.6 3775.9 2922.2 2428.5 2934.6 3150.4 3180.6 2801.3 True False 2693.9856635708175 3120.322305639977 3436.0724716019604 2866.3481607635604 3510.6938101478386 2898.402572052323 2520.917896426192 2876.067100850837 3017.9996438111107 2979.776373195408 2456.7578589037903 1.0965613293175254 1.270097618424744 1.3986207306303853 1.1667198500557683 1.4289946391844723 1.179767294341981 1.0261157351302947 1.1706758524969747 1.228448148796295 1.212889728792804 1.0 11.262539955559717 -7.516994363381492 24.448385371224635 1.1104130431279688 1.2763591370817313 0.2819909580762652 0.1087094396704586 186.62551717639874 775390.6010041914 0.01775957110415024 0.02684791516847829 3.0409244929519646e-08 7.516994363381492 0.16594609395376247 KKPSTDEQT(ph)SSAEEDVPTCGYLNVLSNSR ddPTM_A549_PD325901_60min_R1 1 KKPSTDEQTSSAEEDVPTCGYLNVLSNSR 29 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KKPS(0.017)T(0.017)DEQT(0.512)S(0.392)S(0.063)AEEDVPTCGYLNVLSNSR 141.46 6.1147e-36 8131700.0 1258.8 1043.5 1221.5 778.23 1350.3 1470.9 1640.8 1622.2 1183.3 1348.1 1328.4 True False 1386.5924493204175 1131.439407163568 1304.3983354762076 826.2994996114335 1255.459586282112 1458.9214780753405 1703.2415418802125 1589.8439484087187 1133.570016036594 1262.9807359318143 1165.0152214214097 1.190192560427379 0.9711799351283353 1.1196405948110615 0.7092606898331195 1.0776336336192698 1.252276752483407 1.461990805409499 1.3646550870545577 0.9730087600516927 1.0840894717159824 1.0 10.186133089091621 KKPSTDEQTS(ph)SAEEDVPTCGYLNVLSNSR ddPTM_A549_PD325901_60min_R1 1 KKPSTDEQTSSAEEDVPTCGYLNVLSNSR 29 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KKPS(0.001)T(0.001)DEQT(0.144)S(0.708)S(0.144)AEEDVPTCGYLNVLSNSR 141.69 3.5701e-36 8415700.0 1084.8 1076.2 1247.1 1278.0 1751.4 1202.8 1628.0 1458.8 1319.0 1591.0 1395.4 True False 1194.9280974124488 1166.8951509242286 1331.735705421513 1356.9391574514125 1628.387706001992 1193.0047955870687 1689.9544308757831 1429.7030895935384 1263.5670169460554 1490.5439884782406 1223.774646169403 0.9764282183429374 0.9535212668253785 1.0882197221441416 1.1088145694951552 1.3306270979702743 0.9748566039681827 1.3809359722932586 1.1682731735525997 1.032516093466398 1.217988943588483 1.0 10.25712219989316 -8.874708089187678 5.734838829753617 1.0142091837704041 1.125856457130064 0.0 0.14370166714452687 0.32367306040698346 15.056395126554966 0.022809617007706853 0.024167402113316444 1.334418059207051e-09 8.874708089187678 0.11164727335965985 KKPSTDEQTSS(ph)AEEDVPTCGYLNVLSNSR ddPTM_A549_MK2206_60min_R1 1 KKPSTDEQTSSAEEDVPTCGYLNVLSNSR 29 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KKPS(0.001)T(0.001)DEQT(0.079)S(0.412)S(0.506)AEEDVPTCGYLNVLSNSR 93.29 3.9881e-10 4253900.0 880.31 1020.6 1062.2 1107.6 1209.7 1068.3 845.72 854.17 1361.9 1255.0 1576.4 True False 1028.884806486866 1072.5441806649417 1212.8359321816959 1378.9620497220537 1031.7547324799007 1181.346796919852 999.3763768230037 975.2512132859157 1053.4318245074055 971.4946283646455 1184.9363735733223 0.8683038426646795 0.9051491747447603 1.0235451955316714 1.1637435397173461 0.8707258511851709 0.9969706587344893 0.8434008771367703 0.823040996154861 0.8890197381068247 0.8198707120745928 1.0 10.210593878811217 KKPT(ph)SPVKPIPQNTEYR ddPTM_A549_MK2206_60min_R1 2 KKPTSPVKPIPQNTEYR 17 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KKPT(0.571)S(0.428)PVKPIPQNTEYR;KKPT(0.5)S(0.5)PVKPIPQNTEYR 56.055 0.0037028 11270500.0 2073.96 3191.8 2336.24 2072.95 3496.5 2621.6000000000004 2289.02 2220.63 3499.8 3678.8 3427.7 True False 2423.9937445462374 3354.2489867199292 2667.553961777599 2580.822843058261 2982.169481785543 2899.0159719227595 2704.905304445197 2535.4111028941575 2707.100888032173 2847.756524962439 2576.507490292612 0.9408060149947192 1.3018588144445835 1.035337165456735 1.0016748846187746 1.1574464630983317 1.1251727320200884 1.0498340542910678 0.9840495758101648 1.0506862092315243 1.1052777978297363 1.0 11.331201071289376 -7.950570336847334 5.637417443240983 1.0213692862864734 1.0988604812327023 0.0762809060574311 0.09222813533950888 0.2751230554184927 19.763666325533507 0.012942244726225835 0.017889312308266497 1.1205459316574116e-08 7.950570336847334 0.07749119494622891 KKPT(ph)SPVKPIPQNTEYR ddPTM_A549_PD325901_60min_R1 2 KKPTSPVKPIPQNTEYR 17 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KKPT(0.5)S(0.5)PVKPIPQNTEYR;KKPT(0.5)S(0.5)PVKPIPQNTEYR 63.857 0.001253 10572400.0 2364.3 2203.67 2394.62 2481.8 3358.4 2755.7 2793.0 2731.3 2524.62 2693.9 2720.3 True False 2604.3219954943334 2389.3810046805365 2557.13331321984 2635.0951494232518 3122.5175698510307 2733.258492849422 2899.289143388245 2676.8220788365993 2418.5190010025417 2523.806694256151 2385.720345402486 1.0916292014330655 1.0015344041832501 1.071849564492202 1.1045280954665684 1.3088363755074748 1.1456743025714122 1.2152678116592566 1.1220183807356525 1.01374790455355 1.0578803584920464 1.0 11.220209224616148 -8.753578870186734 4.8404168448724425 1.0059914145132782 1.13505577467778 0.28070034463653826 0.07635754904886209 0.15566796343919276 9.462093441394801 0.013888299113335938 0.015271791826701468 1.763685440738806e-09 8.753578870186734 0.12906436016450185 KKQDPPVTHDLR ddPTM_A549_MK2206_60min_R1 2 KKQDPPVTHDLR 12 2 P25685;M0R128;A0A1B0GX60;M0R1D6;M0QZD0;M0QYT3;M0QXK0;M0R080;P25685-2 P25685 DNAJB1 DnaJ homolog subfamily B member 1 0 ; 79.46600000000001 0.00026667 5378100.0 1625.01 1628.06 1599.8400000000001 1398.25 2061.77 1876.1399999999999 1540.77 1233.4499999999998 2426.0 2163.8 2461.5 False True 1899.271960319912 1710.9212999934982 1826.721368613789 1740.8213127698273 1758.4863642102043 2074.6718895190593 1820.707964950078 1408.2953147822006 1876.5148735259302 1674.9960771756353 1850.2416160560347 1.0264994278792574 0.9247015552706511 0.9872880129610417 0.940861613782395 0.9504090433111027 1.1212978194390735 0.9840379489631681 0.7611413031472698 1.0141999062402993 0.905285051768562 1.0 10.853497963795615 -7.239723458775152 0.005062183259198011 1.9527508967508698 3.5999216565590865e-08 0.0 0.0895030598444801 33595.976218086485 56.49864249379313 10722.352352157637 11071.51944164648 5.7580647098468e-08 7.239723458775152 -1.9527508607516533 KKQDPPVTHDLR ddPTM_A549_PD325901_60min_R1 2 KKQDPPVTHDLR 12 2 P25685;M0R128;A0A1B0GX60;M0R1D6;M0QZD0;M0QYT3;M0QXK0;M0R080;P25685-2 P25685 DNAJB1 DnaJ homolog subfamily B member 1 0 ; 88.087 8.2502e-05 6405400.0 1802.01 1670.32 1465.98 1523.93 2210.83 1563.6399999999999 1903.2199999999998 1770.6100000000001 1963.1399999999999 2288.81 1871.78 False True 1984.9487286303513 1811.0837283885492 1565.4702184538764 1618.0596950038569 2055.54892774945 1550.9062342631903 1975.6480785819442 1735.2937945333256 1880.6360528032465 2144.294145989241 1641.5629261910303 1.209182235393248 1.1032679280780684 0.9536461828400851 0.9856824061921837 1.2521901505895994 0.9447741597465328 1.2035165067757116 1.057098553364495 1.145637503624028 1.3062515678060014 1.0 10.68085433860205 -11.020055438017858 1.3132731343104453 1.000101008400703 1.0962750114495265 0.0 0.1345042317285696 0.784620285755408 2.4145496820836034 0.0666137739424024 0.015118244663851574 9.548706882785742e-12 11.020055438017858 0.09617400304882362 KKQGEDNS(ph)TAQDTEELEK ddPTM_A549_PD325901_60min_R1 1 KKQGEDNSTAQDTEELEK 18 2 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 KKQGEDNS(0.871)T(0.129)AQDTEELEK 94.837 6.5973e-07 102560000.0 1287.9 1094.3 1121.8 1326.3 1305.4 1404.3 1171.8 1261.5 1678.9 1411.7 1623.1 True False 1418.64665989813 1186.5205014461847 1197.932093931403 1408.222538754153 1213.7132073855214 1392.8638463941809 1216.3934902335636 1236.3383928723943 1608.34167153202 1322.5650210777703 1423.4689896786274 0.9966122691709737 0.833541517271874 0.8415582654890549 0.9892892286133212 0.8526446421987304 0.9784996065904069 0.8545275654429152 0.8685390421828009 1.1298747518870298 0.9291140380770515 1.0 10.475195348923037 -8.753282155439235 24.998391633318082 1.0613297455134099 0.8998565635330048 0.2856862380575045 0.0754057060390315 101.44760136991093 310892.9952341322 0.011772854650771733 0.013238626110252547 1.7648908216699863e-09 8.753282155439235 -0.16147318198040506 KKQPAS(ph)PDGR ddPTM_A549_MK2206_60min_R1 2 KKQPASPDGR 10 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KKQPAS(1)PDGR;KKQPAS(1)PDGR 40.113 0.033764999999999996 14934500.0 1530.6 1317.01 1077.67 766.93 1371.9099999999999 969.83 1011.1400000000001 1183.25 1371.94 1602.13 1841.5099999999998 True False 1788.9278604228007 1384.040183595468 1230.4998108023435 954.8278844287963 1170.103856358187 1072.4567668789482 1194.8510495918415 1350.9793110511484 1061.1977805379906 1240.2077202723904 1384.2122439095465 1.2923797403858979 0.9998756980261984 0.8889531328858499 0.6897987563901299 0.8453211286828128 0.7747776914975978 0.8631993069336851 0.9759914471175782 0.7666438331312263 0.8959664428119548 1.0 10.434849455786434 -5.315908647888877 2.204222537921271 0.8678360710401658 1.373257029017616 0.6876895906179594 0.08609258683228868 0.29861227426493425 1.7923335560599682 0.014736512687147981 0.2803219217095828 4.831604222183566e-06 5.315908647888877 0.5054209579774502 KKQPAS(ph)PDGR ddPTM_A549_PD325901_60min_R1 3 KKQPASPDGR 10 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KKQPAS(1)PDGR;KKQPAS(1)PDGR;KKQPAS(1)PDGR 50.675 0.008765100000000001 35397000.0 2643.7200000000003 2880.7400000000002 2236.2599999999998 2271.73 2597.5499999999997 2310.0699999999997 1912.62 2253.52 2398.81 2941.78 2747.49 True False 2912.1085081961983 3123.5100697579082 2388.026051323802 2412.0496026268365 2415.107049061024 2291.2575558212675 1985.4058007258238 2208.5717757477587 2297.9963577864814 2756.035508752686 2409.566147774096 1.2085613465670324 1.296295630914029 0.9910605913557542 1.0010306647339957 1.0022995431322965 0.9509004589634863 0.8239681664518311 0.9165848290938137 0.9536971458157809 1.1437891054780343 1.0 11.234557691365948 -5.797849445685265 6.837598550534569 0.9648638409897884 1.2525879201724361 0.6638125576182992 0.07559892102872491 0.05217898397727247 7.045402190154219 0.007944978608409117 0.025773752272311615 1.5927607843733597e-06 5.797849445685265 0.28772407918264775 KKQPAS(ph)PDGRT(ph)SPINEDIR ddPTM_A549_MK2206_60min_R1 2 KKQPASPDGRTSPINEDIR 19 3 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 KKQPAS(0.999)PDGRT(0.532)S(0.469)PINEDIR;KKQPAS(0.967)PDGRT(0.548)S(0.485)PINEDIR 61.611999999999995 0.014096000000000001 40427000.0 2290.85 2252.16 2778.6000000000004 2542.74 3061.2 2735.01 2478.51 2306.34 3460.6000000000004 3829.3 3774.6 True False 2677.489474094847 2366.78532424687 3172.6472614950703 3165.7114141479346 2610.901535147118 3024.426942847295 2928.8231846469084 2633.2707578700233 2676.7796254426376 2964.258470435648 2837.2626463396728 0.943687563627235 0.8341791435136393 1.1182071090908958 1.1157625531185809 0.9202184854177736 1.0659665035766361 1.0322707305315415 0.9281025714229109 0.9434373757734157 1.0447599816886222 1.0 11.470283992212288 -8.246765772850326 24.679338360448412 0.9691545104752621 1.0055850005273177 0.01524755100588815 0.0845812439996059 2039.1541363352512 3429628.586966945 0.013410265744984943 0.017278371620369597 5.665447600765063e-09 8.246765772850326 0.036430490052055564 KKQPAS(ph)PDGRT(ph)SPINEDIR ddPTM_A549_PD325901_60min_R1 1 KKQPASPDGRTSPINEDIR 19 3 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 KKQPAS(0.956)PDGRT(0.613)S(0.431)PINEDIR 61.038999999999994 0.014648 44567000.0 4081.3 3707.7 4327.7 4092.0 3861.3 3692.4 4890.7 5232.3 4514.5 4845.6 5204.8 True False 4495.630571505737 4020.160891174282 4621.403746574195 4344.753546393724 3590.0956087618433 3662.3303186113194 5076.818264793727 5127.9376718400545 4324.77126459664 4539.647989044731 4564.642595945614 0.9848811767867272 0.8807175603945534 1.012434960555071 0.9518277619923192 0.7865009216604651 0.8023257553317007 1.1122049882510048 1.1234039826896345 0.947450139565794 0.9945243014375138 1.0 12.156286188630045 -7.756503259073931 24.999693074130317 0.9973712118803881 0.9039793645217282 0.34528514003173283 0.08358510652542508 156.91536999487232 794717.016806689 0.013910003803502118 0.020270880506984962 1.7518492877652993e-08 7.756503259073931 -0.09339184735865991 KKQPAS(ph)PDGRTS(ph)PINEDIR ddPTM_A549_PD325901_60min_R1 1 KKQPASPDGRTSPINEDIR 19 3 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 KKQPAS(0.67)PDGRT(0.489)S(0.841)PINEDIR 101.86 7.640599999999998e-10 40062000.0 4440.7 4919.9 5539.8 4644.0 6413.1 5831.9 5339.3 5664.9 5109.5 6029.1 6141.7 True False 4891.51659492944 5334.517239390554 5915.76414152361 4930.849332710763 5962.665979993935 5784.40693996028 5542.489983277067 5551.909125471922 4894.765483764876 5648.421597067356 5386.309835444043 0.9081387340069692 0.9903844008911866 1.0982962960273004 0.9154410873774527 1.1070038973170913 1.0739090614313722 1.0289957601037536 1.0307444790751121 0.9087419092669696 1.0486625852635723 1.0 12.395081504698865 -8.736710776212226 24.79594156220344 0.9569058955737877 1.0224257370265506 0.0 0.06993682645981511 273.3937247185536 274138.0086474249 0.01123714262363748 0.01273874569397936 1.8335350812603359e-09 8.736710776212226 0.0655198414527629 KKQPASPDGRT(ph)SPINEDIR ddPTM_A549_PD325901_60min_R1 2 KKQPASPDGRTSPINEDIR 19 3 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KKQPAS(0.022)PDGRT(0.489)S(0.489)PINEDIR;KKQPAS(0.003)PDGRT(0.498)S(0.498)PINEDIR 52.06100000000001 0.0060782 8150500.0 1342.99 1426.48 1413.44 1684.04 2062.39 2101.9 1444.52 1692.06 1844.58 1792.6100000000001 1773.92 True False 1479.3293561430162 1546.6944758319949 1509.3645381051904 1788.0593260676653 1917.5348412592484 2084.7828232827233 1499.4919990716735 1658.3105359046092 1767.0587172997396 1679.4242986712627 1555.7390858053805 0.9508852542437679 0.9941862937970068 0.9701913077049275 1.1493311072415568 1.2325555478774721 1.3400594240411885 0.9638454241801164 1.0659310105628215 1.1358323085293973 1.0795025425499627 1.0 10.603384409782 -6.244735455289835 23.347695436541237 1.0946882217430214 0.9739974441813967 0.27751477491171905 0.10090168124353067 465.8264818334002 651098.9716220817 0.015722511569164037 0.04143808004611402 5.69199545601535e-07 6.244735455289835 -0.12069077756162472 KKRDS(ph)EEEFGSER ddPTM_A549_MK2206_60min_R1 1 KKRDSEEEFGSER 13 3 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KKRDS(1)EEEFGSER 120.24 3.1992000000000002e-06 17685000.0 2262.5 2886.8 2205.0 2433.2 2883.9 3261.8 3214.2 3050.0 3883.9 3677.7 3372.3 True False 2644.3546871858034 3033.7257894802597 2517.70215633651 3029.3341092304995 2459.682130279228 3606.9615109923952 3798.1785347213004 3482.3468402332564 3004.202851313836 2846.9050157264214 2534.8648392548303 1.0431935644991468 1.1967998224205432 0.993229349883852 1.1950673118023238 0.970340545258538 1.4229403694962794 1.498375170108811 1.3737800873268478 1.1851530719866612 1.1230993351753307 1.0 11.30769310844481 -4.29391327172309 16.533955195061488 1.1480068619771513 1.1104764938919287 0.0 0.17692547372663045 0.0 0.0 0.02544386534723415 0.0 5.0826093174711494e-05 4.29391327172309 -0.03753036808522259 KKRES(ph)IEGK ddPTM_A549_PD325901_60min_R1 1 KKRESIEGK 9 3 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 KKRES(1)IEGK 42.809 0.021863999999999998 6531900.0 3530.1 3692.0 2965.7 2986.2 3576.6 2875.5 2641.8 2213.1 3152.3 3689.8 3486.0 True False 3888.4731532777323 4003.137797075126 3166.9702362028547 3170.650791847733 3325.3919546001644 2852.0828813689877 2742.335144648428 2168.9579843566357 3019.8197934185405 3456.8253982947917 3057.244099574702 1.2718883499746272 1.3093942343799139 1.0358905383588497 1.0370944185610849 1.0877090105637182 0.9328934126541435 0.896995809078483 0.7094487432843072 0.9877588099159738 1.1306998347877018 1.0 11.57801603060196 -5.8304157761833855 1.0692658040028606 0.9641704640192142 1.3550168322011653 0.5525365812729477 0.10715018558819137 0.44489897268152534 0.6945642879915747 0.015243753608950519 0.15619600213122825 1.4776930265132073e-06 5.8304157761833855 0.39084636818195106 KKS(ph)EPDDELLFDFLNSSQKEPTGR ddPTM_A549_MK2206_60min_R1 2 KKSEPDDELLFDFLNSSQKEPTGR 24 3 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 KKS(1)EPDDELLFDFLNSSQKEPTGR;KKS(1)EPDDELLFDFLNSSQKEPTGR 147.55 2.0517e-28 42044000.0 7511.7 7310.6 8006.7 7012.8 10718.6 7211.0 7035.4 7438.2 10253.6 8937.3 10086.0 True False 8779.49131656733 7682.678313902729 9142.170455845591 8730.936314816554 9141.908138843566 7974.063233725596 8313.641112307343 8492.58762853214 7931.175971634579 6918.357722775575 7581.367840561105 1.1580352650343833 1.013363086381273 1.2058734845886292 1.151630747700321 1.2058388843677268 1.051797433052058 1.0965885427466664 1.1201920032287462 1.0461405037230833 0.9125474278878335 1.0 12.888242449518069 -8.820701733450916 0.6571000099162043 1.0071451920385537 1.1364189870911074 0.5022779973465695 0.0620170957924434 0.3993106844742718 0.3722926472036681 0.01610505044847944 0.015521603541750162 1.5111176094314595e-09 8.820701733450916 0.12927379505255376 KKS(ph)EPDDELLFDFLNSSQKEPTGR ddPTM_A549_PD325901_60min_R1 3 KKSEPDDELLFDFLNSSQKEPTGR 24 3 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 KKS(1)EPDDELLFDFLNSSQKEPTGR;KKS(1)EPDDELLFDFLNSSQKEPTGR;KKS(1)EPDDELLFDFLNSSQKEPTGR 132.96 3.3551999999999996e-23 65066000.0 9354.7 10130.300000000001 9705.6 10968.2 12820.8 13572.2 12040.2 14316.0 16433.800000000003 17997.699999999997 17540.699999999997 True False 10304.382257433836 10984.015933290946 10364.280380514028 11645.680803410465 11920.31123735888 13461.672503048578 12498.396399650243 14030.456149315256 15743.144536078928 16861.322150493303 15383.30509965862 0.6698418961775975 0.714021847849504 0.6737356057993044 0.7570337276655132 0.7748862263430899 0.8750832422446925 0.8124649624174457 0.9120573282802935 1.0233915555915414 1.096079291235502 1.0 13.909077878858398 -7.697286135083732 0.6286151638513661 1.017431106459817 0.6813066247249487 0.90792914597294 0.04243648062716384 0.133806371992807 0.10692496534300382 0.008679591611354955 0.01802151575430441 2.007769557010526e-08 7.697286135083732 -0.3361244817348682 KKS(ph)GPPAPEEEEEEER ddPTM_A549_MK2206_60min_R1 3 KKSGPPAPEEEEEEER 16 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 KKS(1)GPPAPEEEEEEER;KKS(1)GPPAPEEEEEEER;KKS(1)GPPAPEEEEEEER 135.86 4.3848000000000005e-11 31750900.0 3286.63 3748.0499999999997 3155.7599999999998 2949.17 4501.77 3485.34 3343.22 3650.24 4796.639999999999 4823.34 4254.8 True False 3841.3327936112587 3938.8097357840816 3603.294220807486 3671.7167823932737 3839.565596458659 3854.156365418551 3950.6397986593715 4167.672698391165 3710.2086986601093 3733.744144044887 3198.2157334938915 1.2010862035922742 1.231564742344985 1.126657649473529 1.148051628894373 1.2005336463854253 1.2050958054690317 1.2352636994701711 1.303124318583159 1.1600870634848923 1.167445993383929 1.0 11.643051542787521 -10.081513066864222 0.8419669055478414 1.0118850017057375 1.2018764356988236 0.21571883735684505 0.06496197854648633 0.23410628477518186 0.33158887798482145 0.023056466456190385 0.01019002421084637 8.288709771870604e-11 10.081513066864222 0.18999143399308616 KKS(ph)GPPAPEEEEEEER ddPTM_A549_PD325901_60min_R1 3 KKSGPPAPEEEEEEER 16 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 KKS(1)GPPAPEEEEEEER;KKS(1)GPPAPEEEEEEER;KKS(1)GPPAPEEEEEEER 147.26 3.603800000000001e-15 69210000.0 4810.4 3850.3999999999996 4799.0 4401.4 5590.8 4323.700000000001 4778.6 5028.799999999999 4480.3 4985.1 4609.3 True False 5298.7482667706845 4174.886720979974 5124.688998731329 4673.264481695337 5198.121495212941 4288.489220718168 4960.452237950258 4928.496638982716 4292.008571662937 4670.339935237512 4042.385320760089 1.3107974243717968 1.0327780232971384 1.26773887002136 1.1560660627019652 1.2859045050746274 1.060880861281132 1.2271101946851382 1.2192050603567923 1.0617514737204496 1.1553425922196225 1.0 11.980991130836598 -8.887275925759948 3.7256851568119886 1.0258398589695088 1.1903532977159084 0.2253346932052298 0.09172949776737271 0.14072987802143083 3.5550680121952203 0.013572183565204279 0.014262145083273507 1.2963553795633303e-09 8.887275925759948 0.16451343874639957 KKS(ph)IPLSIK ddPTM_A549_MK2206_60min_R1 1 KKSIPLSIK 9 2 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 KKS(1)IPLSIK 63.537 0.0013727000000000001 2410400.0 958.35 1117.0 929.53 875.8 1593.4 919.08 848.82 1023.8 1612.1 1274.2 1125.5 True False 1120.0960505920496 1173.8505289072505 1061.3513312378573 1090.3710393161552 1359.0129707642159 1016.3364355640716 1003.0396066959548 1168.9267852560029 1246.9619239947044 986.3573350296671 846.0072877802423 1.3239791982536728 1.3875182233798538 1.2545415938704685 1.288843553791452 1.6063844725616965 1.2013329556897077 1.1856157992772551 1.3816982455588984 1.4739375676851303 1.1658969719015966 1.0 9.724526281014901 -10.908445623137556 1.1227421314641273 0.9970488499265145 1.3522287714699186 0.37683957081132313 0.12412068871178121 0.31108573212687646 0.6869997822253663 0.08719224218585293 0.020027510637879196 1.234679896494607e-11 10.908445623137556 0.35517992154340405 KKS(ph)IPLSIK ddPTM_A549_PD325901_60min_R1 2 KKSIPLSIK 9 2 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 KKS(0.995)IPLS(0.005)IK;KKS(0.906)IPLS(0.094)IK 77.593 0.00039037 10367400.0 3501.1 3407.2 3194.6000000000004 3339.7 3883.1 4083.1 4824.2 4237.7 5328.3 3641.4 4778.5 True False 3856.5290946264026 3694.3367015694403 3411.404766690375 3545.985683990984 3610.364451967762 4049.848587347488 5007.787570903532 4153.17574908866 5104.370080662373 3411.4813825547867 4190.774793407259 0.9202425052029337 0.8815402601402508 0.8140272228555554 0.8461408352387181 0.861502855664644 0.9663722788727589 1.1949550662520834 0.9910281401000723 1.2180015229385128 0.8140455048841035 1.0 12.033001279725386 -7.527690253214462 4.103989568635467 1.1016463669927725 0.8642310500994753 0.3175742664588773 0.11059011257419193 0.10701734530809572 4.205377441932755 0.013490422358607826 0.020975494147656534 2.9669467158747225e-08 7.527690253214462 -0.2374153168932972 KKS(ph)IVAVEPR ddPTM_A549_MK2206_60min_R1 2 KKSIVAVEPR 10 2 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 KKS(1)IVAVEPR;KKS(1)IVAVEPR 65.805 0.0011056 7802500.0 3991.0 3867.6000000000004 4846.9 3922.0 5539.4 4503.0 3872.2 3802.6 5749.1 5869.1 5656.5 True False 4664.583229418136 4064.4443201447484 5534.2633022890805 4882.890176065273 4724.56159799881 4979.504471150517 4575.728617431346 4341.630194974092 4446.9380294261855 4543.266233733021 4251.834938541928 1.0970753326133944 0.9559271182663923 1.3016176268091284 1.1484195051418793 1.1111817994559763 1.1711424698104878 1.076177387779896 1.0211191774210684 1.0458867979835464 1.0685424762258136 1.0 12.053869875423565 -8.03881159625139 3.5714247361396243 1.0224597748247664 1.1306261709626266 0.2489500330962493 0.07781746621565577 0.22420891219089434 5.917437382959704 0.012205691285823522 0.016408331713236433 9.145098841408483e-09 8.03881159625139 0.10816639613786028 KKS(ph)IVAVEPR ddPTM_A549_PD325901_60min_R1 4 KKSIVAVEPR 10 2 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 KKS(1)IVAVEPR;KKS(1)IVAVEPR;KKS(1)IVAVEPR;KKS(1)IVAVEPR 111.12 3.4722e-05 26010000.0 10054.7 9889.199999999999 10251.900000000001 10325.1 12680.3 11584.5 10528.9 10908.300000000001 12408.4 11829.7 12337.000000000002 True False 11075.445742121072 10722.597590150419 10947.655583682794 10962.857976996529 11789.6794726602 11490.15967282873 10929.583051135158 10690.72539910419 11886.918099373343 11082.77072313077 10819.627210686484 1.0236439321293729 0.9910320735967475 1.0118329745104209 1.013238050028986 1.089656717656187 1.0619737121330728 1.0101626274461721 0.9880862982548071 1.0986439613772185 1.0243209407607299 1.0 13.401363171638476 -6.553666033129717 24.99315784913583 1.0442286488918968 1.0079691237799442 0.13542081356949154 0.03378012210044426 301.5718622720931 244815.37999277504 0.00602977584426412 0.012552070195914993 2.7946920974157654e-07 6.553666033129717 -0.03625952511195263 KKS(ph)PIINESR ddPTM_A549_MK2206_60min_R1 2 KKSPIINESR 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KKS(0.998)PIINES(0.002)R;KKS(0.978)PIINES(0.022)R 98.58 0.00010096 868140000.0 9285.5 9268.2 8569.7 7603.9 11375.9 8959.3 8437.0 9141.3 12492.0 12794.7 12726.099999999999 True False 10852.665391321 9739.911792317078 9785.012321613152 9466.855841352042 9702.52017956361 9907.367179297986 9969.893689703082 10437.107269057142 9662.581945624865 9904.368383694933 9565.858147507897 1.1345208369150175 1.0181952985425071 1.0229100380463356 0.9896504521989334 1.01428643723839 1.0357008254276756 1.042237250016136 1.0910790342188195 1.0101113560984767 1.0353873359783434 1.0 13.22367868236261 KKS(ph)PIINESR ddPTM_A549_PD325901_60min_R1 2 KKSPIINESR 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KKS(1)PIINESR;KKS(0.927)PIINES(0.073)R 127.18 3.2943000000000006e-07 1235950000.0 18695.0 17956.4 20405.1 18671.0 23184.7 20931.3 20792.3 20816.4 22197.1 21916.3 24116.6 True False 20592.902637468404 19469.64884599128 21789.91279183427 19824.2652650824 21556.28665487291 20760.84243255041 21583.56235448313 20401.200571850113 21264.23307949455 20532.501077740835 21150.411087723256 0.9736407747375436 0.9205328806725854 1.0302358995037317 0.9372992885509153 1.0191899611532962 0.9815810362476136 1.0204795672747606 0.9645770234552073 1.005381549857315 0.9707849645371155 1.0 14.368398083956427 -5.850278769531253 0.6213655747277568 1.0008166349365466 0.9404744821180727 0.0846978596440936 0.031984108504389326 1.9988737551735754 0.7888298135630191 0.004727517803287199 0.07424915547871591 1.411631141034343e-06 5.850278769531253 -0.06034215281847388 KKS(ph)PNELVDDLFK ddPTM_A549_MK2206_60min_R1 5 KKSPNELVDDLFK 13 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK 169.28 2.6423e-22 825195000.0 53227.97 57243.89 57535.96 46733.20999999999 75315.3 59771.34 57053.34 56521.55 83155.37 80701.47 81259.69 True False 62211.55003707636 60157.359492577 65695.42428974649 58182.84854793353 64236.519139574586 66096.30352579565 67419.19336760508 64533.65280248727 64320.81146683928 62470.95187739496 61080.666319647484 1.0185145936606312 0.9848838121339635 1.0755518603210554 0.9525575284894718 1.0516669677997925 1.0821149720256868 1.1037730501299183 1.0565315784993177 1.0530469842983614 1.0227614667867542 1.0 15.898428179909619 -5.7341093729459205 24.990516651153715 1.0361346406904377 1.001699207700372 0.11510499414464215 0.04069999697738987 440.43740330783925 402728.4458949144 0.005955249517259246 0.023053119999107353 1.8445508280502852e-06 5.7341093729459205 -0.034435432990065795 KKS(ph)PNELVDDLFK ddPTM_A549_PD325901_60min_R1 4 KKSPNELVDDLFK 13 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK 166.6 5.6821e-20 1560200000.0 70676.0 73144.0 74896.0 75610.0 87795.0 81762.0 78375.0 83751.0 89965.0 90739.0 93018.0 True False 77850.9754910788 79308.10157889033 79978.89294623505 80280.25797723109 81628.58207630747 81096.15738010462 81357.60351344565 82080.52060361148 86184.08391171494 85009.72405438547 81577.37568968431 0.9543206659064332 0.9721825556214732 0.9804053178968419 0.9840995410616371 1.0006277032840325 0.9941010812677988 0.9973059665822708 1.0061677016412136 1.0564704145369213 1.0420747582976635 1.0 16.315881476525732 -7.135873163058556 0.6802926535863413 1.025160165168325 0.9652791661304221 0.6594847741030185 0.016243301672136005 0.4868223822038777 0.4223407068671785 0.004410801234339221 0.013942023327505973 7.313526459211823e-08 7.135873163058556 -0.059880999037903004 KKS(ph)RS(ph)QSPK ddPTM_A549_PD325901_60min_R1 1 KKSRSQSPK 9 3 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 2 KKS(0.995)RS(0.562)QS(0.443)PK 43.083999999999996 0.023943 4897300.0 1146.7 1262.6 1183.6 1225.7 1447.2 1069.8 1037.2 1197.6 1068.6 1609.0 1422.3 True False 1263.1121398440764 1369.003733095085 1263.9262135649938 1301.4087052333298 1345.553664568964 1061.0879034910595 1076.6712135776177 1173.712928500975 1023.6904581566 1507.4074654063418 1247.366116702553 1.0126234173998157 1.097515568816383 1.0132760515462917 1.0433253619824465 1.07871590109083 0.8506627599409826 0.8631557320346556 0.9409530311787833 0.8206816302360002 1.2084723524406895 1.0 10.284669260036464 -7.254708140979583 24.949021257620725 0.9070977638635827 1.0494714417129472 0.13473423825433506 0.10403511129110213 346.620933174304 1284733.2761673576 0.010321259897133873 0.017614164021029388 5.562779672942428e-08 7.254708140979583 0.1423736778493645 KKS(ph)TSLEPVER ddPTM_A549_MK2206_60min_R1 7 KKSTSLEPVER 11 2 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 KKS(0.974)T(0.026)SLEPVER;KKS(0.89)T(0.099)S(0.012)LEPVER;KKS(0.922)T(0.071)S(0.006)LEPVER;KKS(0.943)T(0.044)S(0.014)LEPVER;KKS(0.969)T(0.029)S(0.001)LEPVER;KKS(0.726)T(0.257)S(0.017)LEPVER;KKS(0.489)T(0.489)S(0.021)LEPVER 130.72 2.9891e-08 214440000.0 33666.700000000004 34158.9 31605.899999999998 29099.1 38685.0 27552.1 24892.399999999998 25448.3 34564.6 37398.8 34524.8 True False 39348.815888211386 35897.44210554154 36088.0918743565 36228.38080630822 32994.48774570961 30467.64493439621 29415.026867555385 29055.674457150188 26735.77328832416 28950.385105405338 25951.339323994067 1.5162537623570853 1.3832597099276303 1.3906061426660241 1.3960119882064126 1.2713982632566325 1.1740297698711242 1.1334685466641357 1.1196213842530245 1.0302271090727415 1.1155642005204107 1.0 14.663521376175884 -7.195707819626878 0.5284668537916692 1.0022809664029857 1.4955378505570618 0.9188810819398447 0.046327501012420017 0.11708222304795539 0.059098353924504465 0.007295951411480728 0.025138991627241668 6.372240820852252e-08 7.195707819626878 0.4932568841540761 KKS(ph)TSLEPVER ddPTM_A549_PD325901_60min_R1 2 KKSTSLEPVER 11 2 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 KKS(0.333)T(0.333)S(0.333)LEPVER;KKS(0.981)T(0.019)SLEPVER 133.66 2.0956000000000002e-08 113945000.0 16326.5 15736.0 14894.8 12582.1 19126.1 17778.1 19148.9 20595.0 24632.0 31410.0 30298.0 True False 17983.95426106595 17062.127945496803 15905.650697708576 13359.267740977633 17782.74871746301 17633.32104791027 19877.621868180137 20184.21656853506 23596.802700087384 29426.76723953586 26571.538074846343 0.6768126937330083 0.6421204484827501 0.5985972905635254 0.5027660688420607 0.6692404732978877 0.6636168745008654 0.7480794605185866 0.7596179231958811 0.8880480547878047 1.1074544182066897 1.0 14.697594119185556 -8.530609234122176 0.6742817037403604 0.9775965195605202 0.6049589232266949 0.8706137976888428 0.06177618836951121 0.12805659583308995 0.12172810889243 0.013246769962849021 0.015402211554363016 2.9470721332572966e-09 8.530609234122176 -0.3726375963338253 KKS(ph)TSNFK ddPTM_A549_MK2206_60min_R1 1 KKSTSNFK 8 2 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 KKS(0.685)T(0.302)S(0.012)NFK 79.693 0.00083135 18561000.0 3067.9 2750.4 2333.7 2168.8 3892.1 3719.9 3320.6 2870.0 3947.8 3735.7 3799.3 True False 3585.6865170463293 2890.383612091765 2664.6537515839054 2700.156097361133 3319.5772458336933 4113.5373489302265 3923.9100374573964 3276.8312890063758 3053.6296033411654 2891.802775443671 2855.828954654352 1.2555676736880461 1.0120996943395706 0.9330578945357093 0.9454894323977255 1.162386577957877 1.440400463139116 1.3740003689864952 1.1474186098106072 1.0692620783063507 1.0125966300365048 1.0 11.479693858685394 -4.2381965463486 16.398491370703923 1.0893063617043706 1.0764822809530927 0.0 0.166787253082394 0.0 0.0 0.023708288547180902 0.0 5.778344807382473e-05 4.2381965463486 -0.012824080751277833 KKS(ph)TSNFK ddPTM_A549_PD325901_60min_R1 2 KKSTSNFK 8 2 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 KKS(0.885)T(0.104)S(0.011)NFK;KKS(0.957)T(0.041)S(0.002)NFK 50.292 0.006491299999999999 47912000.0 5220.2 4811.1 4657.6 4073.3999999999996 4944.299999999999 5175.1 4090.7 4891.200000000001 4761.2 5687.5 6001.9 True False 5750.150861091871 5216.5482815569185 4973.6927444240555 4325.004666637388 4597.029424909019 5132.955701398939 4246.3738270169315 4793.641178927832 4561.103321519 5328.390279365178 5263.704349178832 1.0924152421267597 0.9910412773032607 0.9449035155631377 0.8216655761283618 0.873344914523207 0.9751603359333261 0.8067272675904357 0.9106972696283118 0.8665196635199617 1.0122890508081894 1.0 12.361862742969274 -5.443090210719639 2.0590933190358967 0.9161157721898624 1.107787863991979 0.41817537673958805 0.06431411579894705 0.39898625667668003 2.4059118542173437 0.009627302926997398 0.12304977544939734 3.6050375217652878e-06 5.443090210719639 0.19167209180211653 KKS(ph)VGGDSDTEDMR ddPTM_A549_PD325901_60min_R1 1 KKSVGGDSDTEDMR 14 2 Q9UK61-2;Q9UK61-3;Q9UK61;A0A087X0F1;Q9UK61-4 Q9UK61-2 FAM208A Protein FAM208A 1 KKS(0.985)VGGDS(0.015)DTEDMR 51.193000000000005 0.011886 2296300.0 559.59 704.01 893.35 880.5 720.42 605.48 957.12 964.52 818.94 1568.5 1466.3 True False 616.3991648516152 763.3393934233098 953.9781031499546 934.8864852394114 669.8201845140778 600.5491716262538 993.5437253561599 945.2818919486975 784.5227997405634 1469.4646423181146 1285.9543956415328 0.4793320563627826 0.5935975614768964 0.7418444280631251 0.7269981644823558 0.5208739802782199 0.46700658566251396 0.7726119438788528 0.7350819711434 0.6100704678171602 1.1427035416641138 1.0 10.328623765315182 -11.2529151210949 0.4306172974504408 1.1880974130171498 0.6122710994159017 0.7070644024719621 0.10931275935085566 1.4759480008806618 0.25861210483619285 0.3979514993124824 0.028236084080864525 5.585793533218826e-12 11.2529151210949 -0.575826313601248 KKSEAPS(ph)GESR ddPTM_A549_PD325901_60min_R1 1 KKSEAPSGESR 11 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KKS(0.028)EAPS(0.965)GES(0.007)R 51.771 0.004924800000000001 3478300.0 977.84 1176.3 920.62 1103.2 1512.9 1277.4 855.54 794.76 1227.0 1450.4 1499.6 True False 1077.1095969522387 1275.430929225209 983.0988093377863 1171.3421584510147 1406.6391232216602 1266.9972779206198 888.0980428694513 778.9078883228417 1175.4334570074384 1358.821496473187 1315.158706747625 0.8189959062932568 0.9697924080807993 0.747513440236411 0.890647001340038 1.0695584616553733 0.9633797589751674 0.675278229397659 0.5922539115062952 0.8937578795446476 1.0331996355280493 1.0 10.361021191877002 -9.754077715361797 1.4561925162060338 0.9768073501172443 0.8491912378323492 0.1853177150172255 0.13193857247585394 0.5437564093920257 2.3209476620896927 0.036418860352447575 0.025785054232518225 1.761660775643582e-10 9.754077715361797 -0.1276161122848951 KKSIPLS(ph)IK ddPTM_A549_MK2206_60min_R1 1 KKSIPLSIK 9 2 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 KKS(0.205)IPLS(0.795)IK 57.96 0.0025455 3252600.0 1596.4 1838.5 2251.4 2093.4 2143.7 1961.4 1800.4 2042.9 3078.2 2730.9 2452.8 True False 1865.833291767255 1932.0717971315842 2570.682374048082 2606.283093976297 1828.3645697422185 2168.9540461280517 2127.509375244924 2332.4873311188603 2380.992614875317 2113.9877933075795 1843.7020661638196 1.0120036886705257 1.0479305917097739 1.3943046554137057 1.41361402246469 0.9916811415992424 1.176412439912801 1.1539333899384407 1.2651107648710582 1.291419399355252 1.146599459914986 1.0 10.848389826332161 -10.954616081371837 1.2274679687702024 1.000390186584763 1.2053323016135138 0.06249066655152291 0.14146500210872073 0.571284900304009 1.535033626287663 0.09753662824885338 0.022887608669752063 1.1101557652075553e-11 10.954616081371837 0.2049421150287507 KKSPNELVDDLFK ddPTM_A549_PD325901_60min_R1 2 KKSPNELVDDLFK 13 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4 Q9UNZ2 NSFL1C NSFL1 cofactor p47 0 ; 83.76899999999999 0.00014273 3052800.0 1258.85 1211.3200000000002 1368.87 1034.73 1299.08 1621.13 1332.6799999999998 1260.8400000000001 1411.48 1327.6599999999999 1608.85 False True 1386.64752528361 1313.4021875279095 1461.7697498840073 1098.6429220576674 1207.8371023827044 1607.9280547639382 1383.395866670478 1235.6915570901544 1352.1604041539185 1243.8313210201272 1410.9716493404362 0.9827607279932261 0.9308494526745906 1.0360022120694747 0.7786428044611896 0.8560321555343172 1.1395892011831492 0.9804561752301341 0.8757734839447574 0.958318620211817 0.881542390735888 1.0 10.46247328481068 KKST(ph)SLEPVER ddPTM_A549_MK2206_60min_R1 1 KKSTSLEPVER 11 2 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 KKS(0.355)T(0.554)S(0.092)LEPVER 69.26100000000001 0.0012644 19714000.0 1812.2 1838.3 1649.3 1445.9 1944.6 1733.2 1355.9 1824.7 2119.7 2383.9 1975.2 True False 2118.055055963807 1931.8616179858545 1883.1955403382347 1800.145564908918 1658.5519159960427 1916.606073594952 1602.2494789461177 2083.356812909387 1639.5913344653407 1845.375334309546 1484.7033272532524 1.4265847035463137 1.3011768630975313 1.2683985451977167 1.21246146072781 1.1170931495549454 1.2909017164666379 1.0791714745533234 1.4032142143600246 1.1043225298744606 1.2429253039552002 1.0 10.535958965816166 -2.0000000060349863 0.04504189787323476 0.4353346522192921 2.575986957130347 0.10178599198353677 0.12221736507727861 242.06101677561364 0.8041154654353991 9.580009470156865 37.18439424537496 0.009999999861039307 2.0000000060349863 2.140652304911055 KKST(ph)SLEPVER ddPTM_A549_PD325901_60min_R1 2 KKSTSLEPVER 11 2 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 KKS(0.21)T(0.395)S(0.395)LEPVER;KKS(0.314)T(0.636)S(0.05)LEPVER 116.58 6.5453e-06 57468000.0 5193.6 6486.8 6215.3 5714.1 8113.5 7401.0 7008.0 7603.200000000001 8407.9 11508.599999999999 11442.7 True False 5720.850448673754 7033.465401426579 6637.107633635099 6067.046979337334 7543.635750055482 7340.728709793727 7274.693274924746 7451.548211404985 8054.545202259856 10781.945031930036 10035.320441251699 0.5700715270792286 0.7008710327290056 0.6613747585330975 0.6045693323750602 0.7517085073881875 0.7314892187815502 0.7249089172101593 0.7425321647701723 0.8026196322690835 1.0743996761288483 1.0 13.292799064174616 -10.900494638544435 0.15870837716386021 1.3063976141543756 0.5464077839483363 0.9077725853382353 0.04430639376935002 2.480502187612287 0.09785465195082699 0.4228271033888571 0.09863995433669251 1.257492378276377e-11 10.900494638544435 -0.7599898302060393 down KKST(ph)SNFK ddPTM_A549_MK2206_60min_R1 1 KKSTSNFK 8 2 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 KKS(0.064)T(0.832)S(0.104)NFK 62.2 0.0036181999999999994 17608000.0 2785.9 2028.1 1812.7 2175.3 4070.5 2940.1 2578.1 2231.7 3510.2 3742.5 3108.3 True False 3256.0918112843865 2131.3216272845075 2069.7681173656206 2708.248597652927 3471.734842158743 3251.2194305195712 3046.50739853307 2548.05030929461 2715.1453046375605 2897.0666507208675 2336.4233252841636 1.3936223697340333 0.9122155237109221 0.8858703364955871 1.1591429379877214 1.4859185852959669 1.3915369682093663 1.3039192707779288 1.090577328911364 1.1620947605063545 1.2399579388587538 1.0 11.190085977526103 -10.10167126499695 0.7483605173449487 1.0084072410872547 1.1967483078971826 0.0 0.19373473278777092 1.0734957165218302 1.1843750248318918 0.10317233793522007 0.04081306596830419 7.912773511018379e-11 10.10167126499695 0.1883410668099279 KKT(ph)LCGTPNYIAPEVLSK ddPTM_A549_MK2206_60min_R1 2 KKTLCGTPNYIAPEVLSK 18 2 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1 1 KKT(0.885)LCGT(0.107)PNY(0.008)IAPEVLSK;KKT(0.829)LCGT(0.171)PNYIAPEVLSK 89.402 2.2246000000000003e-06 17281000.0 5557.9 5373.0 5486.1 5650.4 8344.099999999999 6858.5 6314.1 6758.5 8787.6 8505.6 9313.2 True False 6495.9376423911435 5646.462750061469 6264.111473867451 7034.748253656098 7116.693943362431 7584.261917696159 7461.290238965769 7716.53807203819 6797.222630913631 6584.179052604249 7000.475408756065 0.9279280710373106 0.8065827562223814 0.8948122960381257 1.004895788199922 1.0166015202997503 1.0833924090655191 1.0658262194069457 1.1022877192578218 0.9709658607487988 0.9405331307026491 1.0 12.773237184800436 -6.2085228616940595 3.8106179103002833 1.0103736450746545 0.864299326311501 0.5974986700344882 0.05306197645870915 0.12886298038854221 3.856947006961473 0.00772690082756797 0.021458942539449896 6.186957579351107e-07 6.2085228616940595 -0.14607431876315358 KKT(ph)LCGTPNYIAPEVLSK ddPTM_A549_PD325901_60min_R1 2 KKTLCGTPNYIAPEVLSK 18 2 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1 1 KKT(0.961)LCGT(0.039)PNYIAPEVLSK;KKT(0.962)LCGT(0.038)PNYIAPEVLSK 97.97399999999999 4.6571999999999996e-07 23379000.0 12117.0 11531.1 14852.3 12673.8 11517.2 11827.2 12774.2 14705.9 10867.2 12396.5 12616.5 True False 13347.108919936049 12502.866265398963 15860.266392135301 13456.63184171181 10708.271604183028 11730.883204495656 13260.329171310459 14412.579287944622 10410.48937570598 11613.782874400069 11064.750482582971 1.2062729241789716 1.1299727260076702 1.4334047945410928 1.2161712876303807 0.967782474719057 1.060203139958849 1.1984300226366198 1.3025670403170382 0.9408697821151174 1.0496199523596426 1.0 13.433683297331031 -8.77638725104401 24.999243071584857 0.9720773762898733 1.1850125925790846 0.3436058378729212 0.11704033228014986 174.10939544622582 291184.3685058053 0.02092912234296067 0.022324315379630064 1.6734500311743992e-09 8.77638725104401 0.2129352162892113 KKT(ph)PSGPSAK ddPTM_A549_MK2206_60min_R1 2 KKTPSGPSAK 10 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 KKT(0.993)PS(0.007)GPSAK;KKT(0.872)PS(0.081)GPS(0.047)AK 58.21 0.0040238 9209600.0 3423.2 3655.2 2808.7 2456.7 4757.5 3743.3 3460.4 3514.2 5148.7 5297.5 5021.9 True False 4000.952470795333 3841.2340673785 3207.015894105377 3058.591610285452 4057.6780522221397 4139.413521398563 4089.109887856882 4012.348611786135 3982.5276707844023 4100.791070726462 3774.823632610925 1.0599044777167514 1.017592990092001 0.8495803264554604 0.810260798375346 1.0749318238785035 1.096584615407704 1.083258526976153 1.0629234640588814 1.055023507953884 1.086353024628617 1.0 11.882193525046405 -6.8044232648509455 24.99966774515398 1.0420439623874898 0.9342270895610936 0.41924164380067563 0.0709467365029128 124.91900140054923 72653.23529696188 0.010887916020857091 0.02057633451394527 1.5688330690690744e-07 6.8044232648509455 -0.10781687282639618 KKT(ph)PSGPSAK ddPTM_A549_PD325901_60min_R1 1 KKTPSGPSAK 10 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 KKT(0.992)PS(0.006)GPS(0.002)AK 54.523999999999994 0.0065668 3852700.0 2267.5 2542.8 1528.2 1762.4 2804.5 2241.1 1432.2 1721.3 2293.2 2741.1 2617.9 True False 2497.6949307547247 2757.0906799573772 1631.912841813132 1871.2594452991927 2607.5215949997655 2222.849224634337 1486.7031547299123 1686.9673211662723 2196.8247788178137 2568.0264782009476 2295.914896235403 1.087886547907407 1.2008679783724394 0.7107897790501595 0.8150386795118081 1.135722233988421 0.968175792699951 0.6475427974998769 0.7347690996440599 0.95684068360719 1.1185198904418123 1.0 11.164853450606582 -7.538702015475251 24.947885957834 0.9287077649168151 0.9840755959949719 0.04955241345764594 0.17648064590672738 998.9696798087905 1575028.458515012 0.027762689382529456 0.041186243032530434 2.892663958804587e-08 7.538702015475251 0.05536783107815679 KKT(ph)PVTEQEEK ddPTM_A549_MK2206_60min_R1 3 KKTPVTEQEEK 11 2 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 KKT(0.939)PVT(0.061)EQEEK;KKT(0.969)PVT(0.031)EQEEK;KKT(0.994)PVT(0.006)EQEEK 134.88 1.8136e-08 28753100.0 5298.4 6139.6 6139.4 4980.799999999999 8514.5 5271.3 5345.24 5915.0 8105.0 9262.3 8742.199999999999 True False 6192.640386557018 6452.079415648123 7010.059237465926 6201.096223596608 7262.028329089951 5829.105467194254 6316.400918092743 6753.469363927778 6269.230441025422 7169.93999705327 6571.270467554364 0.9423809927065351 0.981861794839408 1.0667738106471316 0.9436677814761255 1.1051178558158887 0.8870591304946969 0.9612145701930793 1.0277265860951883 0.9540362814131204 1.0911040768227143 1.0 12.681956608032484 -7.27437711409585 24.99573143313072 0.9747832357684891 1.0062061236450879 0.006814907826735883 0.06558048677143698 1671.1846224140354 3228727.082528441 0.007850109954716505 0.01260469363774231 5.3164641036938e-08 7.27437711409585 0.03142288787659875 KKT(ph)PVTEQEEK ddPTM_A549_PD325901_60min_R1 3 KKTPVTEQEEK 11 2 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 KKT(0.942)PVT(0.058)EQEEK;KKT(0.996)PVT(0.004)EQEEK;KKT(0.905)PVT(0.095)EQEEK 138.73 5.8624e-09 54605000.0 6384.9 6915.2 6588.7 7101.6 7326.9 7553.2 7016.8 7743.8 6851.0 8120.5 9124.5 True False 7033.090347685052 7497.968172896509 7035.848803071702 7540.249703096204 6812.283820432795 7491.68924345548 7283.828163740289 7589.343834106422 6563.076294994261 7607.770244146796 8002.24434497113 0.8788897269932621 0.9369831574323865 0.879234437210513 0.9422668663991424 0.8512966521340798 0.9361985113793109 0.9102231636200515 0.9484019116306804 0.8201544481853658 0.9507045668916329 1.0 12.966188966069435 -11.1113149769274 1.467912798153374 0.9998017801540755 0.8922691412228171 0.2908278263085794 0.04167607632516178 0.29904889349201946 1.1560410686706535 0.03106590959916631 0.006794353978836988 7.739003143626685e-12 11.1113149769274 -0.10753263893125842 KKT(ph)TPTPSTNSVLSTSTNR ddPTM_A549_MK2206_60min_R1 1 KKTTPTPSTNSVLSTSTNR 19 2 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 KKT(0.436)T(0.436)PT(0.112)PS(0.008)T(0.008)NSVLSTSTNR 72.99 0.00020739999999999997 7647600.0 977.36 825.3 1056.8 839.84 1271.4 800.35 1058.8 727.08 1570.8 1411.7 1256.8 True False 1142.3144738421731 867.3042448586875 1206.6701309825048 1045.6008377018504 1084.3787442133962 885.0425057706669 1251.1702546708088 830.1458165891142 1215.0163080521575 1092.795989531769 944.7018740845921 1.2091798536433158 0.9180719004067794 1.2773025692912463 1.106805084635858 1.1478528559754895 0.9368484704534596 1.324407507800471 0.8787384034709557 1.28613728985083 1.1567628047638614 1.0 9.88371530996758 -11.264092417320427 1.7809375395462104 0.999725264872779 1.1424254719409652 0.0 0.15447944651130627 0.644654489234017 3.6882980849997136 0.10488465682001476 0.021130071339409383 5.44386795689167e-12 11.264092417320427 0.1427002070681862 KKT(ph)TPTPSTNSVLSTSTNR ddPTM_A549_PD325901_60min_R1 1 KKTTPTPSTNSVLSTSTNR 19 2 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 KKT(0.452)T(0.452)PT(0.079)PS(0.016)T(0.002)NSVLSTSTNR 105.72 5.3013e-10 20897000.0 1402.6 1178.3 994.3 1111.0 1439.6 1499.9 1308.1 1538.8 1301.5 1307.4 1644.8 True False 1544.990919460454 1277.5994762442099 1061.7791772116198 1179.6239467359298 1338.487462350388 1487.6853116902603 1357.8804613197863 1508.107426834752 1246.802481088167 1224.8505408777196 1442.5000272462617 1.0710508771426839 0.8856841955720115 0.7360687397965326 0.817763552481754 0.9278942371360407 1.031324286717871 0.9413382569648789 1.0454817319579086 0.8643344592986373 0.8491164767712096 1.0 10.49435563078279 -6.957871138624725 9.849325454440852 0.9511641010195239 0.8685633904197286 0.12624689685172574 0.09399535998081654 0.6321138082094548 142.06986151234707 0.013783808797594905 0.02605259631236733 1.101866200480695e-07 6.957871138624725 -0.08260071059979524 KKT(ph)VSASESEDR ddPTM_A549_MK2206_60min_R1 1 KKTVSASESEDR 12 2 H3BNE2;Q9ULG6-3;Q9ULG6-4;Q9ULG6-2;Q9ULG6;Q9ULG6-5 H3BNE2 CCPG1 Cell cycle progression protein 1 1 KKT(0.987)VS(0.01)AS(0.003)ESEDR 53.169 0.0080435 2829000.0 689.62 855.49 683.75 873.86 1112.9 956.16 896.3 883.99 1224.7 1496.7 1400.1 True False 806.0109964097563 899.0307869067713 780.7160314716957 1087.9557392290662 949.1938842497156 1057.3402165523598 1059.1461081048797 1009.2982896058355 947.3074054440261 1158.5944304967059 1052.4165292057899 0.7658669110965176 0.8542537692611387 0.7418317840949021 1.033769148466431 0.9019184495002452 1.0046784587755246 1.0063944063137893 0.9590293021789636 0.9001259284277066 1.1008896176982734 1.0 10.039490097358682 -6.257029205195901 24.994907056421045 0.9605652971499179 0.7940111122591147 0.6458563709203713 0.06388184426591172 165.27355567999916 936692.1852846199 0.00720862534857144 0.018390536085721564 5.533128990838e-07 6.257029205195901 -0.1665541848908032 KKT(ph)VSASESEDR ddPTM_A549_PD325901_60min_R1 2 KKTVSASESEDR 12 2 H3BNE2;Q9ULG6-3;Q9ULG6-4;Q9ULG6-2;Q9ULG6;Q9ULG6-5 H3BNE2 CCPG1 Cell cycle progression protein 1 1 KKT(0.953)VS(0.044)AS(0.003)ES(0.001)EDR;KKT(0.998)VS(0.001)AS(0.001)ESEDR 65.704 0.01073 5811600.0 1765.9499999999998 1868.97 2004.94 1786.6799999999998 2218.5 1633.08 1593.08 2822.8 2006.04 2311.6 2115.36 True False 1945.227943976321 2026.474661050785 2141.00728508364 1897.0391657553103 2062.680213409513 1619.780737925949 1653.7055311668255 2766.4970395562377 1921.7331149920133 2165.6451814998754 1855.1841303718702 1.0485363216137482 1.0923307438192562 1.1540672702145618 1.0225611219383655 1.111846624623751 0.8731104969086089 0.8913969800050745 1.4912250456787248 1.0358719027026193 1.167347836824032 1.0 10.857346668700142 -8.984345944390915 24.997024271729313 1.0158256946920543 1.0852384966780881 0.0 0.1599370636128614 259.7971892313952 414862.5327170684 0.027081102588268652 0.027323498392814838 1.0367022846233515e-09 8.984345944390915 0.06941280198603383 KKTEFLDLDNSPLSPPS(ph)PR ddPTM_A549_MK2206_60min_R1 4 KKTEFLDLDNSPLSPPSPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KKTEFLDLDNSPLS(0.001)PPS(0.999)PR;KKTEFLDLDNSPLS(0.002)PPS(0.998)PR;KKTEFLDLDNSPLSPPS(1)PR;KKTEFLDLDNSPLS(0.019)PPS(0.981)PR 234.3 7.424999999999999e-77 120677800.0 14533.7 14587.2 15000.199999999999 15040.6 21555.2 15800.2 17372.5 14720.100000000002 24096.0 21928.199999999997 22205.600000000002 True False 16986.633245150184 15329.626173031194 17127.453916316957 18725.547675198184 18384.458634000774 17472.166676676083 20528.858376717646 16806.719253415606 18638.294473405123 16974.60439020369 16691.336676617462 1.0176916069847417 0.918418127321471 1.0261283591691277 1.121872264516143 1.1014371700832786 1.0467805553974876 1.2299109876248608 1.0069127223920766 1.1166448100897224 1.0169709424160769 1.0 14.026811872866464 -5.988177780989302 8.677484127828816 1.0716229343235317 0.9688163839256472 0.29679945705718325 0.06629628947015884 0.16366315417902003 87.53746244219302 0.009409045998438921 0.028587207932599647 1.0275955597567265e-06 5.988177780989302 -0.10280655039788456 KKTEFLDLDNSPLSPPS(ph)PR ddPTM_A549_PD325901_60min_R1 4 KKTEFLDLDNSPLSPPSPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KKTEFLDLDNSPLSPPS(1)PR;KKTEFLDLDNSPLSPPS(1)PR;KKTEFLDLDNSPLSPPS(1)PR;KKTEFLDLDNSPLS(0.003)PPS(0.997)PR 244.01 4.4566000000000004e-86 210635000.0 28445.4 28641.5 29076.6 31114.1 35741.7 34107.6 32120.6 34306.1 35254.2 35440.0 34343.3 True False 31333.156067603304 31055.219722352977 31049.912927799847 33035.947291751916 33231.32629417119 33829.83901393873 33342.967010066764 33621.83792288518 33772.5885737829 33202.31235177178 30119.291820115843 1.0403018854074368 1.0310740341382147 1.0308978415974066 1.0968367878320473 1.1033236270175815 1.123195034464413 1.1070302452396281 1.11628912537811 1.1212942447480496 1.1023603260683863 1.0 14.878400228589236 -6.244949878778374 23.24742927345827 1.0763064085842118 1.0337895180366163 0.26598462233220777 0.036276801085287226 586.1119180477087 826314.1153818648 0.007396319865801409 0.019486888886786288 5.689185850262223e-07 6.244949878778374 -0.04251689054759544 KKTEFLDLDNSPLSPPSPR ddPTM_A549_MK2206_60min_R1 2 KKTEFLDLDNSPLSPPSPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 0 ; 85.927 1.3616e-05 12192500.0 4005.2 4816.4 3765.3999999999996 4536.3 5005.1 3674.4 4890.3 4446.6 6291.6 5660.2 4892.2 False True 4681.179842261468 5061.534187492286 4299.390339895464 5647.693703642247 4268.8564202158805 4063.2225691306826 5778.804208931489 5076.919167141377 4866.562645620668 4381.5568888203725 3677.3317221488246 1.2729827483515823 1.376414903503623 1.1691603218714095 1.5358129563416307 1.160857040583057 1.1049377309796695 1.5714666626688447 1.380598638018632 1.3233950628682811 1.1915043895632125 1.0 11.84444360869119 -10.530542472172202 0.827097346418433 0.998576259753047 1.3222227571112348 0.21983395345793655 0.14949211422654016 0.47377058376525644 0.5785692444851506 0.09285735896448583 0.02589007813467815 2.9475252069531016e-11 10.530542472172202 0.32364649735818785 KKTEFLDLDNSPLSPPSPR ddPTM_A549_PD325901_60min_R1 1 KKTEFLDLDNSPLSPPSPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 0 83.936 3.9687e-05 3725200.0 1788.7 2054.4 2120.3 2273.4 3078.5 2553.2 2208.5 2227.3 2312.2 2620.7 2779.9 False True 1970.2875072286558 2227.5314979174273 2264.196308399675 2413.8227547339893 2862.2767802484495 2532.4075857107628 2292.5456760375714 2182.874754216951 2215.0262748920945 2455.2285547485385 2437.9899232380117 0.8081606443277757 0.9136754326527058 0.9287143834427696 0.9900872566068999 1.1740314235782083 1.0387276672363561 0.9403425560482758 0.8953583989050168 0.9085461157075709 1.007070837884199 1.0 11.251476447648681 -5.3503024665552 1.6409976316645076 0.9723364054950339 0.7701382213837539 0.3379247278759079 0.07357520135764624 0.8923747807497979 2.605381435452403 0.011678677688924114 0.26919961689693883 4.463726054449099e-06 5.3503024665552 -0.20219818411128 KKTPS(ph)GPSAK ddPTM_A549_PD325901_60min_R1 1 KKTPSGPSAK 10 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 KKT(0.356)PS(0.642)GPS(0.002)AK 51.875 0.004992 4115600.0 2707.4 2481.2 1922.5 2082.2 3245.4 2360.1 2058.8 1850.8 2486.6 3119.4 3178.9 True False 2982.2532549174607 2690.299431772157 2052.972410931648 2210.812764980695 3017.45430002219 2340.880128088662 2137.148760618588 1813.884342075487 2382.09684938443 2922.4405516398674 2787.915452707405 1.0697072079504168 0.9649860181949022 0.7363825932877419 0.7929984974378355 1.0823335037265476 0.8396524815038355 0.7665758868487766 0.6506238703594776 0.8544365457966538 1.0482529334961797 1.0 11.444971094860794 -10.487385603893513 1.0820784129331265 0.9912865880420051 0.8585671462628858 0.18008623059101525 0.12845451838355973 0.7377676288680602 1.6686802162151466 0.06279109641531715 0.02332800340331952 3.255475236268003e-11 10.487385603893513 -0.13271944177911932 KKTT(ph)PTPSTNSVLSTSTNR ddPTM_A549_PD325901_60min_R1 1 KKTTPTPSTNSVLSTSTNR 19 2 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 KKT(0.248)T(0.744)PT(0.007)PSTNSVLSTSTNR 140.45 6.3283e-19 20956000.0 1584.4 1292.1 1589.6 1428.9 1567.5 1413.1 1582.3 1545.1 1881.0 1780.9 1739.0 True False 1745.2471216263668 1400.9898016253446 1697.4798150413262 1517.1599077326457 1457.4042075814339 1401.5921821118122 1642.5152923677836 1514.2817683924984 1801.9481113537017 1668.4536700697054 1525.1140244292612 1.1443387797050029 0.9186131523179932 1.1130182975509446 0.9947845757305969 0.9556034396358225 0.9190081263834197 1.0769786822873504 0.9928974123486822 1.1815169767572227 1.0939861828980857 1.0 10.574701393782862 KKTTPTPS(ph)TNSVLSTSTNR ddPTM_A549_MK2206_60min_R1 1 KKTTPTPSTNSVLSTSTNR 19 2 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 KKT(0.22)T(0.22)PT(0.22)PS(0.295)T(0.043)NSVLSTSTNR 78.661 6.7052e-05 9313700.0 816.98 723.53 871.11 793.11 1071.5 940.37 794.48 857.16 1002.6 1011.4 1336.4 True False 954.8662507567095 760.3545865535029 994.6464967829015 987.4219856040612 913.8837694074674 1039.8793292329137 938.8267320843078 978.6650549424061 775.5127008232064 782.9240375521936 1004.5349972363534 0.9505554842625781 0.756921947612943 0.9901561414180124 0.9829642454674322 0.9097580193041727 1.0351847691656324 0.9345883763802951 0.974246848178391 0.7720116302137543 0.7793895082860733 1.0 9.972312112008353 -5.776346299654429 24.98893779293636 0.9202274377612814 0.8537386254094664 0.08640419314123182 0.09154679554729488 477.8268532020942 801000.3001905477 0.013912496620823318 0.04350404963666213 1.673607835010552e-06 5.776346299654429 -0.06648881235181492 KKVNEEKDGPIS(ph)PK ddPTM_A549_MK2206_60min_R1 1 KKVNEEKDGPISPK 14 3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 KKVNEEKDGPIS(1)PK 68.187 0.00059418 17218000.0 1259.1 1502.2 1361.6 1312.7 1775.8 1135.8 1632.4 1477.1 1943.9 1566.9 1703.4 True False 1471.6052979605045 1578.6555635850245 1554.6953542257554 1634.311558929342 1514.582172388036 1255.9896021169793 1928.9859498721478 1686.4834484290323 1503.6097537704281 1212.9362017406881 1280.3987685516345 1.1493335780267577 1.2329405513024454 1.2142274675759026 1.2764082558264624 1.1828988043321111 0.9809362777954977 1.5065509255793679 1.3171548503883317 1.1743292720214704 0.9473112842124498 1.0 10.32237747911893 -9.978516071774086 0.9290828391327036 1.0195827388194347 1.2285399227488185 0.3711502755473134 0.12328467405748424 0.4383058409441549 0.7677812839219981 0.04649710829143596 0.02387835415137871 1.0507125708174292e-10 9.978516071774086 0.20895718392938378 KKVNEEKDGPIS(ph)PK ddPTM_A549_PD325901_60min_R1 3 KKVNEEKDGPISPK 14 3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 KKVNEEKDGPIS(1)PK;KKVNEEKDGPIS(1)PK;KKVNEEKDGPIS(1)PK 61.648 0.0011263 57537000.0 4778.0 4288.900000000001 3995.7 4585.5 5591.2 5239.0 4984.6 5849.3 4857.299999999999 5253.6 6307.8 True False 5263.059042622309 4650.340654895862 4266.872230096016 4868.735920573903 5198.493400592866 5196.3353209849165 5174.291680677782 5732.631122812921 4653.16457271575 4921.886799415017 5531.9805884387015 0.951387836324225 0.840628520030352 0.7713100510535705 0.8801071953775624 0.9397164934846679 0.9393263837267884 0.9353416191465939 1.036271012012146 0.8411389914202536 0.8897151247604301 1.0 12.433580378783835 -6.627243208199634 4.476010718338593 0.9345801375057384 0.8491904440189351 0.2764179760883194 0.06188290305515776 0.25315764239420296 8.85645406609159 0.010366721712703222 0.022170885219837653 2.3591567175533565e-07 6.627243208199634 -0.08538969348680336 KKVPYLASSPSTSDGGTDSPGTASPS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 KKVPYLASSPSTSDGGTDSPGTASPSPTK 29 2 Q9Y597-3;Q9Y597-2;Q9Y597 Q9Y597-3 KCTD3 BTB/POZ domain-containing protein KCTD3 1 KKVPYLASSPSTSDGGTDSPGTAS(0.003)PS(0.985)PT(0.012)K;KKVPYLASSPSTSDGGTDSPGT(0.001)AS(0.009)PS(0.957)PT(0.034)K 234.39 2.3059999999999995e-106 33031000.0 2977.3999999999996 3256.6 2728.9 2966.7 3427.3 3222.0 3591.3 3485.6 3475.5 3553.6 3627.3999999999996 True False 3279.663456153967 3531.0451110386953 2914.0995642087796 3149.946321135448 3186.5782715431237 3195.7611002506947 3727.9688867347663 3416.076973599699 3329.436821376813 3329.2250895388283 3181.2527959831523 1.0309345614705863 1.1099542656582377 0.9160226335638284 0.9901590735300151 1.0016740183511024 1.0045605631485375 1.1718555945764297 1.0738150007798972 1.0465803992630724 1.0465138431445986 1.0 11.63537930382661 KKYDLESAS(ph)AILPSSAIEDPDLGSLGK ddPTM_A549_MK2206_60min_R1 2 KKYDLESASAILPSSAIEDPDLGSLGK 27 2 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 KKYDLES(0.093)AS(0.907)AILPSSAIEDPDLGSLGK;KKYDLES(0.126)AS(0.872)AILPS(0.001)S(0.001)AIEDPDLGSLGK 159.08 1.2566e-41 41042000.0 2937.7 3128.7799999999997 2832.3 3169.9 3796.1 2759.2 3010.8 3295.7 4580.3 4210.6 4266.4 True False 3433.5119401307106 3288.0215379001156 3233.9627289759187 3946.5256423022183 3237.698718663262 3051.1767125912706 3557.8233875735486 3762.8755676579494 3542.8693632361196 3259.4225356112966 3206.9351333501772 1.0706521327557492 1.0252847036744488 1.0084278585321764 1.2306222228384818 1.0095928305481336 0.9514307541991999 1.109415451087347 1.173355684225206 1.1047524243295197 1.0163668425080639 1.0 11.646979457356377 -10.888541035737067 1.2171590318728227 1.001218523278149 1.077425660192058 0.10598787252861941 0.07546519740771836 0.8060635656004151 2.1735834539083405 0.04930245074304877 0.012644553116348592 1.2925845609491326e-11 10.888541035737067 0.07620713691390901 KKYDLESAS(ph)AILPSSAIEDPDLGSLGK ddPTM_A549_PD325901_60min_R1 2 KKYDLESASAILPSSAIEDPDLGSLGK 27 2 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 KKYDLES(0.164)AS(0.835)AILPSSAIEDPDLGSLGK;KKYDLES(0.034)AS(0.921)AILPS(0.042)S(0.002)AIEDPDLGSLGK 160.86 9.8959e-42 100425000.0 6609.1 7036.4 7460.7 7318.3 8245.8 8357.7 8780.9 8911.8 7742.1 8212.8 9152.8 True False 7280.050966637736 7629.382122247946 7967.0279668336825 7770.334769934798 7666.643454465704 8289.637662186602 9115.061954592848 8734.047157828149 7416.726460877983 7694.2424063947865 8027.063624379612 0.9069382413423177 0.950457412480968 0.9925208444388568 0.968017089877663 0.9550993754653635 1.0327110946286144 1.1355412615528289 1.0880749881315632 0.9239650771363109 0.9585376130601496 1.0 12.970656617449569 -5.155994540887768 1.2177954762034224 0.9895505677023527 0.8517877444173854 0.17027770786507423 0.06029843254996165 3.2852163755259363 3.4181876488317364 0.010282904275703173 0.602949092941222 6.982411809628413e-06 5.155994540887768 -0.13776282328496736 KKYNDDS(ph)DDSYFTSSSR ddPTM_A549_MK2206_60min_R1 2 KKYNDDSDDSYFTSSSR 17 2 H0Y6A0 H0Y6A0 ARFGAP3 1 KKYNDDS(0.999)DDSYFTSSSR;KKYNDDS(0.988)DDS(0.011)Y(0.001)FTSSSR 81.57600000000001 7.3485e-05 4732200.0 1912.6599999999999 1843.28 1639.24 1596.4 2665.1 1516.5 1629.9699999999998 1770.21 3026.0 3112.3 3406.5 True False 2235.4702479526177 1937.095078714555 1871.7088810671487 1987.5180716651196 2273.067320436622 1676.975023428771 1926.114450326576 2021.1426885407598 2340.6158315290477 2409.2292684137747 2560.5720353828488 0.8730354846737898 0.7565087222492167 0.7309729447964141 0.7762008036489206 0.887718560160234 0.6549220253348721 0.7522203725225756 0.7893324853243446 0.9140988026056788 0.9408949387567431 1.0 11.32225043098879 -8.92880014984245 1.695439020767592 0.9699749360783317 0.7717091315874356 0.6084708215398826 0.06247131357669164 0.1460937040555761 0.8370384238245134 0.012454307676328536 0.012606979174577052 1.178147999512351e-09 8.92880014984245 -0.19826580449089615 KKYNDDS(ph)DDSYFTSSSR ddPTM_A549_PD325901_60min_R1 2 KKYNDDSDDSYFTSSSR 17 2 H0Y6A0 H0Y6A0 ARFGAP3 1 KKYNDDS(0.999)DDSYFTSSSR;KKYNDDS(0.997)DDS(0.003)YFTSSSR 71.527 0.00032718 7068400.0 2465.0 2040.6599999999999 2438.4 2702.3 2798.9 2487.3999999999996 2744.8 2920.1 2865.5 3153.3 3462.3 True False 2715.2449853629096 2212.633579896893 2603.884487290368 2869.2149336314174 2602.3149196808154 2467.143439094842 2849.2548660121906 2861.8563147258674 2745.073000044674 2954.200099854456 3036.4590493280243 0.8942142611683829 0.7286887601486192 0.8575398004681188 0.9449213333755914 0.8570228932468936 0.8125067386108259 0.9383478649721088 0.942497912283455 0.9040375501366188 0.9729095804892305 1.0 11.56817419732784 -14.99999999959897 0.03654796335450772 1.6969175406486838 0.4487790729131845 0.4613457081425214 0.0547030870526251 406.7159528114403 1.145338995249791 33.06136260339271 11.381716592519345 1.0000000009234065e-15 14.99999999959897 -1.2481384677354994 KKYPS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 KKYPSPQK 8 2 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 KKY(0.004)PS(0.996)PQK 58.37 0.0030299 44561000.0 2115.1 2415.5 2607.3 1868.7 3610.3 2202.6 2629.5 1966.8 3080.9 3218.0 3615.8 True False 2472.077170769809 2538.438632565321 2977.0543456762744 2326.531583889131 3079.229652535492 2435.677670032451 3107.2461132006933 2245.599923072385 2383.081069186331 2491.051565001936 2717.897068996712 0.9095551111809966 0.9339715846937365 1.0953521307468896 0.85600430215996 1.1329456467136052 0.8961625875447742 1.1432537856732399 0.8262269931735601 0.8768106402447481 0.916536388893302 1.0 11.408275104689434 -8.293956743404399 24.990223620317146 0.9315318292920917 0.9929297808291947 0.13994508553860996 0.10010370251480676 1318.8671569975043 1013571.3402527994 0.015972479761302037 0.01931041767175241 5.0821005877409305e-09 8.293956743404399 0.061397951537103035 KKYPS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 KKYPSPQK 8 2 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 KKY(0.009)PS(0.991)PQK;KKY(0.027)PS(0.973)PQK 61.353 0.0022335000000000002 147609000.0 7131.3 8368.8 8371.2 7189.5 9797.2 9691.6 8500.9 9521.5 9865.8 9496.3 9458.6 True False 7855.264326214413 9074.068146306154 8939.31997211496 7633.579086460822 9109.078470505156 9612.674822839734 8824.406401370972 9331.586213027747 9451.174735243672 8896.701997351302 8295.252163005527 0.9469590763312373 1.0938869570202971 1.0776429451996399 0.9202347242081946 1.0981074826307347 1.158816469221941 1.0637900124031578 1.1249309881915315 1.1393474905311778 1.0725053105712772 1.0 13.018070122237212 KKYS(ph)DDDEEEESEENSR ddPTM_A549_PD325901_60min_R1 1 KKYSDDDEEEESEENSR 17 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KKY(0.006)S(0.994)DDDEEEESEENSR 48.229 0.0074919 1973400.0 402.32 457.09 364.27 443.8 679.16 445.4 694.96 570.2 687.27 632.06 631.15 True False 443.16323022766954 495.61057845749457 388.9915527334571 471.212518057071 631.4581445748049 441.7728100718994 721.4070830967044 558.8269136867534 658.3864319458047 592.1516237319653 553.5225511894932 0.8006236227870629 0.8953755856783998 0.7027564674601479 0.8512977782828506 1.140799310195821 0.7981116742625047 1.303302063387364 1.0095829203089581 1.1894482537901374 1.0697877122792196 1.0 9.112498285149197 -6.681683365008974 5.42521251827123 1.0821343273237276 0.8051145624185823 0.4958798997606463 0.12654169193163733 0.1288655327593782 6.476321429430023 0.01789370169761115 0.03755905930671165 2.0812135031781564e-07 6.681683365008974 -0.27701976490514535 KKYVDAETS(ph)L ddPTM_A549_PD325901_60min_R1 1 KKYVDAETSL 10 2 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-8;Q9Y6M7-5;H7C3C4;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 KKYVDAET(0.199)S(0.801)L 49.423 0.0095861 11464000.0 3627.2 3405.9 5009.8 4740.2 5717.2 6701.2 5614.9 6279.7 7462.1 4946.7 5069.7 True False 3995.4306737964876 3692.9271460070895 5349.795154374706 5032.991388224713 5315.643595269264 6646.627648975778 5828.578092091172 6154.446457170652 7148.49388715176 4634.364517790896 4446.159039476152 0.898625226475756 0.8305881803189369 1.2032397192442805 1.131986360257977 1.1955585817046153 1.4949145070975431 1.3109243372405088 1.3842164444697351 1.6077908648076604 1.0423299024267287 1.0 12.118343839270773 -5.952436539964175 1.0860688233529954 1.31264430453429 0.8072766952750091 0.42255595805663937 0.176793612207611 0.6466880192842022 1.1333948832212615 0.034697435403625104 0.28182275210714924 1.1157411739196007e-06 5.952436539964175 -0.5053676092592808 KLAAGHELQPLAIVDQRPS(ph)SR ddPTM_A549_MK2206_60min_R1 2 KLAAGHELQPLAIVDQRPSSR 21 2 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 KLAAGHELQPLAIVDQRPS(0.5)S(0.5)R;KLAAGHELQPLAIVDQRPS(0.5)S(0.5)R 95.823 2.4768e-07 29576000.0 5039.299999999999 6469.900000000001 6282.4 5650.0 8747.5 6517.4 5929.4 6275.8 9960.2 8903.099999999999 10717.5 True False 5889.810640943826 6799.1902748227585 7173.338787740809 7034.250253638142 7460.754337743179 7207.0669421000175 7006.695228603229 7165.413868831433 7704.230603171051 6891.883526528506 8056.048962047758 0.7311041266867749 0.8439857189118274 0.890428896539058 0.873163791180598 0.9261058830316168 0.894615583402321 0.8697433768851133 0.8894451737555061 0.9563286717180927 0.8554917626489531 1.0 12.975856736265081 -2.0000000000032734 0.12870876149564078 1.0373142815089929 0.21467269891722737 0.2901619376667076 0.05492666222734564 26.08355714026385 0.21879142401000254 0.10363074206636597 3.915258958285556 0.009999999999924628 2.0000000000032734 -0.8226415825917655 KLAAGHELQPLAIVDQRPSSR ddPTM_A549_MK2206_60min_R1 1 KLAAGHELQPLAIVDQRPSSR 21 2 P17302 P17302 GJA1 Gap junction alpha-1 protein 0 35.436 0.045981 2276400.0 811.82 983.18 882.27 918.76 1048.5 728.2 1126.5 748.26 1340.4 1120.7 1062.8 False True 948.8353689065976 1033.219662498684 1007.389152594563 1143.8562412447034 894.2670389395508 805.2576406599609 1331.1704683478154 854.328146450144 1036.8015401789605 867.5330916400467 798.8774282122096 1.187710824462741 1.2933394110419467 1.2610059028066136 1.4318294657598656 1.1194045636522885 1.0079864722952925 1.6663012639208155 1.069410796049184 1.2978230496500522 1.0859401718001722 1.0 9.64183035716389 -10.795401393574043 0.7592277958565491 0.9765383471465857 1.2643293792627184 0.18360800541069822 0.17280105318535216 0.9188746093614039 0.8105625252171079 0.1676175667092696 0.030536883522883654 1.6017642871399687e-11 10.795401393574043 0.28779103211613266 KLAAT(ph)PK ddPTM_A549_MK2206_60min_R1 2 KLAATPK 7 1 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 KLAAT(1)PK;KLAAT(1)PK 70.1 0.013288 209860000.0 23370.0 22631.0 22615.7 20479.0 29081.0 24791.0 21868.6 23455.0 32755.0 30846.0 29130.0 True False 27314.28465835675 23782.821235183514 25822.94632973224 25496.355919337253 24803.223423367752 27414.36716506604 25841.841548256572 26779.818077924934 25336.04479898677 23877.86717652261 21896.217052899567 1.2474430899350126 1.0861611929460717 1.1793336843230042 1.164418303752654 1.1327629500312808 1.2520138569523243 1.180196628752112 1.2230340068892707 1.1570968965907147 1.0905019400764766 1.0 14.418394020588456 -10.308979790664345 0.7389117080368218 1.0007012386819933 1.179575638524171 0.4694828102846843 0.05257767002135356 0.2969282505716196 0.3008515309518887 0.028832666649394767 0.009223958514090233 4.909307204513227e-11 10.308979790664345 0.17887439984217757 KLAAT(ph)PK ddPTM_A549_PD325901_60min_R1 2 KLAATPK 7 1 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 KLAAT(1)PK;KLAAT(1)PK 74.16199999999999 0.011554 322430000.0 32287.0 33525.0 36375.0 34718.0 36526.0 34213.0 38361.0 37339.0 36696.0 37259.0 38552.0 True False 35564.75247156684 36350.26940599775 38843.62624064435 36862.45200970116 33960.539767859285 33934.38067128398 39820.84884694464 36594.24435312117 35153.79473377747 34906.46038133929 33810.3484012633 1.0518895590628694 1.075122591893775 1.1488679672757525 1.0902712853536827 1.0044421715154634 1.003668470627651 1.1777710295779373 1.0823385763086029 1.039734767491008 1.0324194228071024 1.0 15.045177262216264 -9.161944136567271 1.659330829588953 1.0127715499742236 1.0794282922083003 0.19075420837981483 0.05024189544604393 0.3521774743185803 1.9996122577034419 0.010938793706895107 0.010132595505185768 6.887408835982579e-10 9.161944136567271 0.0666567422340767 KLAT(ph)PPAAQESSR ddPTM_A549_MK2206_60min_R1 2 KLATPPAAQESSR 13 1 H0Y760;Q9Y4B4 H0Y760 RAD54L2 Helicase ARIP4 1 KLAT(0.912)PPAAQES(0.039)S(0.048)R;KLAT(0.999)PPAAQESSR 54.974 0.011575 56630000.0 5784.4 6277.200000000001 6451.0 6126.3 7939.799999999999 5549.6 5992.0 5083.6 10032.900000000001 9863.0 9049.7 True False 6760.665304997813 6596.682667911007 7365.848802960014 7627.243775020054 6771.865937789464 6136.854988473661 7080.668838295697 5804.2158678720625 7760.464169249101 7634.94144984901 6802.409730986106 0.9938632885052278 0.9697567375075956 1.082829334641127 1.1212561543120068 0.9955098568882862 0.9021589747114567 1.0409059610217353 0.8532587858436247 1.1408404486279176 1.1223877643051379 1.0 12.731830191480991 KLAT(ph)PPAAQESSR ddPTM_A549_PD325901_60min_R1 2 KLATPPAAQESSR 13 1 H0Y760;Q9Y4B4 H0Y760 RAD54L2 Helicase ARIP4 1 KLAT(1)PPAAQESSR;KLAT(1)PPAAQESSR 83.792 0.00026344 72264000.0 5821.4 6070.8 5998.0 5508.0 7308.4 6520.3 6328.0 7254.2 6149.8 6920.2 7287.9 True False 6412.384242511823 6582.407621474451 6405.060348904046 5848.216650424391 6795.083196611264 6467.200838598575 6568.8155028144665 7109.509290190192 5891.345292505578 6483.257390991282 6391.5345018044945 1.003262086859023 1.0298634263205602 1.0021162127961185 0.914994145580109 1.0631379983465374 1.011838524343836 1.027736844878162 1.1123321462448486 0.9217419214184481 1.0143506835738572 1.0 12.641946624656224 KLDDT(ph)PSGAGK ddPTM_A549_MK2206_60min_R1 2 KLDDTPSGAGK 11 1 Q9HC52;C9J6K3 Q9HC52 CBX8 Chromobox protein homolog 8 1 KLDDT(0.999)PS(0.001)GAGK;KLDDT(0.98)PS(0.02)GAGK 65.092 0.0036188 9159800.0 2558.3 2718.1 2873.6 2334.18 2806.6 2674.8999999999996 2495.7 2752.8 3716.8 4048.8999999999996 3896.8 True False 2990.078495570137 2856.4396800562204 3281.119689999363 2906.0542047853232 2393.752857880538 2957.9561425450834 2949.136385135945 3143.0178300964303 2874.9507345099687 3134.2506779168248 2929.1170137912454 1.0208122384636273 0.9751879718724666 1.1201736477412043 0.9921263613241346 0.8172267774247198 1.0098456731561265 1.0068346096282401 1.073025698631386 0.9815076423965843 1.0700325945190112 1.0 11.51625011251383 -6.486116042859664 24.99036732446155 0.9867961915829034 1.0363341321215689 0.06772627067593395 0.07087863215692018 1062.32135163809 722139.2145842949 0.009172624388243237 0.021308912460556217 3.265005800315963e-07 6.486116042859664 0.04953794053866545 KLDEAVAEAHLGK ddPTM_A549_MK2206_60min_R1 1 KLDEAVAEAHLGK 13 1 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 89.01299999999999 5.9486000000000006e-05 5294000.0 1706.9 1675.4 1909.3 2082.0 2487.4 2111.5 2264.7 1840.7 2778.5 2854.7 2675.8 False True 1994.9829903016341 1760.67070378801 2180.067449928935 2592.090093464531 2121.5067550388558 2334.937528499737 2676.1666752483775 2101.62486190733 2149.1741863527604 2209.8212873247458 2011.32501167692 0.9918749971882163 0.8753785159366513 1.0838961566491572 1.2887475064526766 1.0547806757845033 1.160895188467332 1.3305490956019848 1.0448957029352126 1.0685364990121164 1.098689309035307 1.0 10.97393051143121 -4.108833891318447 10.9482933269344 1.0671449020443686 1.0821587730167403 0.0 0.12654587188225885 0.0 0.0 0.017145369999910755 0.0 7.783341908896871e-05 4.108833891318447 0.015013870972371723 KLDEAVAEAHLGK ddPTM_A549_PD325901_60min_R1 2 KLDEAVAEAHLGK 13 1 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ; 96.59100000000001 5.2168e-05 18476600.0 6585.1 6644.1 7048.2 7133.8 8541.8 8796.1 7057.8 8493.4 9692.9 8288.1 6926.8 False True 7253.614504305598 7204.021624470979 7526.5332362696745 7574.438623964695 7941.8534356102655 8724.467477937662 7326.38844117635 8323.992474056598 9285.541120967722 7764.787951544006 6074.847512602998 1.1940405893739894 1.1858769474501827 1.2389666112038171 1.2468524696711507 1.3073337921872015 1.4361623826503809 1.2060201389379537 1.3702389165797957 1.528522502285655 1.278186478826839 1.0 12.568632480117543 -6.058180969376818 1.9458010014932137 1.2779068054337648 1.1888626453143654 0.08507878909752498 0.12808555858472606 1.2567056832113614 9.035478597811302 0.027963689312260342 0.11355400306764174 8.74619247726679e-07 6.058180969376818 -0.08904416011939942 KLDELYGT(ph)WRK ddPTM_A549_PD325901_60min_R1 1 KLDELYGTWRK 11 2 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 1 KLDELY(0.005)GT(0.995)WRK 66.533 0.0017617999999999998 3448100.0 1652.4 1295.2 1404.0 1035.1 1425.2 1735.6 1366.5 1306.3 2043.3 1509.3 1690.0 True False 1820.1504315674124 1404.3510495047951 1499.2838829378595 1099.0357761173361 1325.0988686730848 1721.4658490363468 1418.5029052774926 1280.2448217274748 1957.4272067671554 1414.0025404212513 1482.1407137926697 1.2280550791360458 0.9475153313285501 1.0115664922943262 0.7415191863294807 0.8940439030800736 1.161472613913469 0.9570635851758411 0.863780887883067 1.320675687909732 0.9540271900384825 1.0 10.533466707645822 -8.748980332720723 24.999665073325623 1.1514301981773607 0.9709410882073096 0.06484671247394069 0.1553224630412675 270.08090850017436 541929.6732722396 0.02805910430632672 0.03170738506688788 1.7824594853392935e-09 8.748980332720723 -0.18048910997005108 KLDELYGTWR ddPTM_A549_PD325901_60min_R1 2 KLDELYGTWR 10 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ; 57.802 0.012592 5200800.0 4570.700000000001 4079.4 4227.6 4017.7 4308.5 5003.799999999999 4077.5 4552.1 5560.0 4449.0 5883.5 False True 5034.714099228504 4423.185354655544 4514.510358623999 4265.864204141263 4005.885823518091 4963.050711804601 4232.671493793615 4461.304794446633 5326.33253542083 4168.089380728909 5159.86679857939 0.9757449747762204 0.85722859277556 0.8749276938441377 0.8267392106547667 0.7763545029148791 0.9618563628756897 0.8203063487915909 0.8646162718144034 1.0322616345226725 0.8077901123099659 1.0 12.333118107770046 -8.757858475244172 24.99229474867546 1.0152346654340265 0.8663578058668371 0.0 0.08344381365887009 42.64123582928583 297606.7223356633 0.009013204105750476 0.01002348088976757 1.7463911615688452e-09 8.757858475244172 -0.14887685956718943 KLDFNSPGGSS(ph)PVENSDCSTNSR ddPTM_A549_PD325901_60min_R1 1 KLDFNSPGGSSPVENSDCSTNSR 23 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 KLDFNS(0.003)PGGS(0.191)S(0.805)PVENS(0.001)DCSTNSR 66.98 0.00022668 7184300.0 972.98 986.79 1460.1 1436.4 1477.5 1156.2 1262.9 1475.2 1253.4 1704.8 1496.6 True False 1071.7562133299818 1069.950256439806 1559.1911662945638 1525.1231656989103 1373.72549709829 1146.7842905368889 1310.9603505853968 1445.7759787279872 1200.7239568159114 1597.1586370570124 1312.527687729058 0.8165589368894304 0.8151829987609932 1.1879301144437449 1.1619740901143853 1.0466259187835623 0.8737219803119436 0.9988058635575353 1.1015203658137498 0.9148180019679508 1.2168571009884175 1.0 10.358132141367006 KLDGFPLLR ddPTM_A549_PD325901_60min_R1 1 KLDGFPLLR 9 1 P09661;H0YKK0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 0 54.608000000000004 0.019607 806650.0 657.44 421.62 495.58 262.48 508.42 605.31 512.5 506.25 614.59 569.28 643.17 False True 724.1828248182525 457.1513970755189 529.2130389646326 278.6927934646687 472.7103331537814 600.3805560498911 532.0034679507611 496.15244660455795 588.760919594296 533.3355636460672 564.0641673905508 1.2838660327750222 0.8104599148539658 0.9382142485895798 0.49407994617694867 0.8380435427065213 1.064383435004116 0.9431612548832742 0.8796028453639183 1.0437835863923004 0.9455228579992256 1.0 9.139715481317893 -7.250301707582594 23.365568398708923 1.0056731507035672 0.8520413799243589 0.06526380366396745 0.1789643585135537 453.72553169264324 951861.6181087277 0.02524909951723321 0.04342828159890528 5.619507981871685e-08 7.250301707582594 -0.1536317707792083 KLDKENLS(ph)DER ddPTM_A549_MK2206_60min_R1 3 KLDKENLSDER 11 2 Q9BZI7;Q9BZI7-2 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B 1 KLDKENLS(1)DER;KLDKENLS(1)DER;KLDKENLS(1)DER 74.789 0.00045216 47610100.0 6194.200000000001 7114.0 5789.700000000001 4679.2 8327.3 6120.200000000001 6077.7 6503.0 9029.3 8802.5 8701.400000000001 True False 7239.62952634974 7476.0722136492195 6610.766519066439 5825.604210057268 7102.365201107604 6767.835501740039 7181.9394189769355 7424.820164602256 6984.177966829221 6814.009136398244 6540.602233577076 1.1068750655993285 1.1430250528414312 1.0107274961821047 0.8906831514918813 1.085888569197289 1.0347419488371317 1.0980547604787014 1.1351890696679163 1.067818790596222 1.041801487547675 1.0 12.675207764329508 -10.604792240071404 1.0599491279214357 1.0024744167741146 1.061696403150346 0.044602628925076826 0.06746412166665791 0.955870633401702 2.0230029352867387 0.03808352722965415 0.01227960969358473 2.484321282894314e-11 10.604792240071404 0.05922198637623133 KLDKENLS(ph)DER ddPTM_A549_PD325901_60min_R1 3 KLDKENLSDER 11 2 Q9BZI7;Q9BZI7-2 Q9BZI7 UPF3B Regulator of nonsense transcripts 3B 1 KLDKENLS(1)DER;KLDKENLS(1)DER;KLDKENLS(1)DER 83.633 0.00019374 205412000.0 12538.2 12418.1 12085.2 11791.2 15022.0 13370.900000000001 12886.199999999999 13518.599999999999 13244.4 13775.400000000001 13968.0 True False 13811.068833865005 13464.616868325747 12905.374346211263 12519.515644241847 13966.906543086634 13262.011823507764 13376.591392599214 13248.960917863453 12687.78392664165 12905.618893075536 12250.024550447348 1.1274319310127954 1.0991501945874913 1.0534978352953572 1.0219992288737623 1.1401533511683117 1.08261104040183 1.0919644558680273 1.0815456624843764 1.0357353876632285 1.0535177982646775 1.0 13.580497020105716 -9.022551439454745 1.176879012257077 1.0101247659615578 1.0875666809824294 0.34098811286050534 0.03350550752462417 0.23740302843138028 0.672156919032707 0.007098957880662291 0.006720998814518086 9.49398542245712e-10 9.022551439454745 0.07744191502087161 KLDPAQS(ph)ASRENLLEEQGSIALR ddPTM_A549_MK2206_60min_R1 2 KLDPAQSASRENLLEEQGSIALR 23 2 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 KLDPAQS(0.5)AS(0.5)RENLLEEQGSIALR;KLDPAQS(0.5)AS(0.5)RENLLEEQGSIALR 102.57 8.756999999999999e-11 38514000.0 2827.9 2339.58 2359.34 1996.15 3961.2999999999997 2627.8 3158.8 2746.9 4266.4 3875.3 4828.6 True False 3305.1803844829724 2458.6546288458608 2693.9298891296967 2485.206839610578 3378.598017502379 2905.8720518075334 3732.7130718305198 3136.281487028438 3300.0672120408203 2999.8670384872594 3629.5253574195285 0.9106370830903481 0.6774038990579976 0.7422264962614812 0.6847195142280194 0.9308649712546573 0.8006204022978672 1.028430084997217 0.8641023765317428 0.9092283114360326 0.8265177242404127 1.0 11.825565180191841 -7.200563416604548 1.2953459446574067 0.9516676884234186 0.7517870866567372 0.3163261923146876 0.09325292538856615 0.2557651288447167 0.8419337441177795 0.013170535712461195 0.02786416363649406 6.301393249871156e-08 7.200563416604548 -0.19988060176668143 KLDPAQS(ph)ASRENLLEEQGSIALR ddPTM_A549_PD325901_60min_R1 1 KLDPAQSASRENLLEEQGSIALR 23 2 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 KLDPAQS(0.5)AS(0.5)RENLLEEQGSIALR 153.01 8.8846e-29 9820700.0 1595.8 1824.4 1707.0 1248.9 2440.9 1897.1 1743.0 2205.5 2448.3 1666.0 2625.2 True False 1757.8044412341314 1978.1485907323563 1822.8472850248756 1326.0417165423069 2269.4596046478605 1881.6506465815003 1809.3308188061976 2161.5095723187214 2345.4064651925933 1560.808475678662 2302.317042513914 0.7634936495604332 0.8591990391438026 0.7917446864896146 0.5759596493688783 0.9857285346634205 0.8172856352255093 0.7858738763583047 0.9388409729871764 1.0187156772429697 0.6779294279880783 1.0 11.168870799352083 -8.417269477849343 2.9494314300750153 1.0085987892408854 0.7982229933906069 0.0 0.13485940248521372 0.15010041386958875 2.5243158628757683 0.014852459046680637 0.017999031900999326 3.82587275899233e-09 8.417269477849343 -0.21037579585027855 KLDPAQSAS(ph)RENLLEEQGSIALR ddPTM_A549_MK2206_60min_R1 2 KLDPAQSASRENLLEEQGSIALR 23 2 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 KLDPAQS(0.15)AS(0.85)RENLLEEQGSIALR;KLDPAQS(0.069)AS(0.931)RENLLEEQGSIALR 175.39 2.5638e-41 37957600.0 2661.7 2956.1 2636.4 2109.86 4127.200000000001 2454.6 2970.5 2954.4 4484.0 4346.9 4476.4 True False 3110.9298876828498 3106.55286347603 3010.281163249694 2626.7757947152145 3520.0943472687823 2714.3441427683874 3510.2013992251955 3373.195247470539 3468.3811594766157 3364.9322709468374 3364.786337645025 0.9245549569902717 0.9232541242574915 0.8946425898045446 0.780666446878664 1.0461568712064064 0.8066913825702602 1.043216729678576 1.0024990917644414 1.0307879346372095 1.0000433707484424 1.0 11.716299181947429 -7.783034225026422 24.999863979644722 1.0157688591765761 0.8987553942112863 0.45164902489784486 0.06542290488255759 154.03977328383513 178327.78056849237 0.009224441508543622 0.012751536528739484 1.648032511499062e-08 7.783034225026422 -0.11701346496528986 KLDPAQSAS(ph)RENLLEEQGSIALR ddPTM_A549_PD325901_60min_R1 5 KLDPAQSASRENLLEEQGSIALR 23 2 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 KLDPAQS(0.059)AS(0.941)RENLLEEQGSIALR;KLDPAQS(0.072)AS(0.928)RENLLEEQGSIALR;KLDPAQS(0.011)AS(0.989)RENLLEEQGSIALR;KLDPAQS(0.244)AS(0.756)RENLLEEQGSIALR;KLDPAQS(0.215)AS(0.785)RENLLEEQGSIALR 277.73 7.8382999999999975e-140 167345900.0 18339.1 18287.9 18273.3 19304.3 22842.2 17619.9 19694.8 19819.2 22719.1 19988.7 23458.299999999996 True False 20200.87193146812 19829.085514390623 19513.436024279476 20496.68276775374 21237.84267331204 17476.40937625922 20444.296391408094 19423.89050813838 21764.29523479845 18726.61007070711 20573.07781441572 0.9819081089224874 0.9638366069123709 0.9484937645356232 0.996286649603374 1.0323123678864674 0.8494795739319744 0.9937402937873794 0.9441412064522453 1.0579017603067653 0.9102483468752169 1.0 14.328470022485263 -8.755430921331614 24.998118952812504 1.0273424985127237 0.9638248303875205 0.0 0.05725231614277291 134.84740122810385 561030.8928181326 0.007730316951206818 0.008655958045428803 1.7561802091518784e-09 8.755430921331614 -0.06351766812520321 KLDPELHLDIK ddPTM_A549_PD325901_60min_R1 2 KLDPELHLDIK 11 1 B4DY09;Q12905 B4DY09 ILF2 Interleukin enhancer-binding factor 2 0 ; 105.17 5.6685e-05 6657500.0 2514.6000000000004 1873.26 2220.7 1966.72 2356.3999999999996 2206.2 2331.1 2196.7 2437.8 2376.0 2584.1 False True 2769.880340849322 2031.1261944065423 2371.4100561539212 2088.1998276548056 2190.8945931386857 2188.2334386632783 2419.811286126864 2152.885095222186 2335.347743677858 2225.978954509304 2266.2720819595497 1.2222187983952586 0.8962411047531033 1.0463924764512225 0.921425032888914 0.9667394354716278 0.9655651923184816 1.0677496781562765 0.949967619669337 1.0304798626202822 0.9822205251650958 1.0 11.146105361941318 KLDPGSEETQTLVR ddPTM_A549_MK2206_60min_R1 1 KLDPGSEETQTLVR 14 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 77.42 0.00072838 9776100.0 1462.6 2221.8 1919.3 2185.4 2389.8 1996.8 1756.6 1372.3 3361.6 3348.6 3139.7 False True 1709.451122863184 2334.8801299249158 2191.4856002978077 2720.823098106334 2038.263585748917 2208.100050631433 2075.751482201306 1566.8277274924917 2600.202967372124 2592.148934296297 2360.0258386882515 0.7243357656682821 0.9893451553152011 0.9285854266391753 1.1528785208634074 0.8636615550284923 0.9356253708894723 0.8795460830018069 0.6639027852183877 1.1017688555551441 1.0983561670397066 1.0 11.204586939648923 KLDPGSEETQTLVR ddPTM_A549_PD325901_60min_R1 1 KLDPGSEETQTLVR 14 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 85.28 0.00018721 17013000.0 3622.1 3311.5 2927.2 3708.9 3703.6 4054.4 3349.9 3784.0 4090.4 4395.7 4280.1 False True 3989.8129255509098 3590.571726710259 3125.8573946835468 3937.9903294769474 3443.4719127263793 4021.3823106320374 3477.3822776356155 3708.525151509424 3918.4947127491628 4118.154751825145 3753.674833789351 1.0629085102513198 0.9565484187359834 0.8327459178258071 1.0491026803996044 0.9173602043867448 1.0713187712566021 0.9263941155300293 0.9879718717579093 1.0439089389086549 1.097099491611491 1.0 11.874087965199065 -8.562078320335951 7.90577909879391 1.0205620450750654 0.9711049355265202 0.14151722045066673 0.0711107963005355 0.38947200210420224 67.61348539361533 0.010744728672691186 0.012211321758847142 2.7410798031090764e-09 8.562078320335951 -0.04945710954854521 KLDVEEPDS(ph)ANSSFYSTR ddPTM_A549_MK2206_60min_R1 1 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDS(0.915)ANS(0.037)S(0.046)FYS(0.001)T(0.001)R 67.217 0.00078084 6103400.0 1602.0 2074.0 1357.5 1736.9 2512.8 1937.8 1786.6 2405.8 2806.7 1956.4 3263.8 True False 1872.3784348604006 2179.5577412297566 1550.0139125745177 2162.4405779724043 2143.170448686031 2142.8567097924642 2111.202093875017 2746.8295174535006 2170.9869313789086 1514.4478812211903 2453.3083837024915 0.7632054931612954 0.8884157229106293 0.6318055744118328 0.8814385473663469 0.8735837952225126 0.8734559112207905 0.8605530832975945 1.1196429832062254 0.8849221507581089 0.6173084033306939 1.0 11.260512878392356 -7.16265983694811 0.9089554002173984 0.9557438387531056 0.7774873908711143 0.051325893237794906 0.13432637232196773 0.4305268628022742 0.694884927146802 0.015159924006843005 0.03900419878946661 6.876068001830145e-08 7.16265983694811 -0.17825644788199135 KLDVEEPDS(ph)ANSSFYSTR ddPTM_A549_PD325901_60min_R1 2 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDS(0.977)ANS(0.017)S(0.005)FYSTR;KLDVEEPDS(0.98)ANS(0.014)S(0.005)FYSTR 99.064 2.9284e-07 19294300.0 6765.1 6433.2 7160.5 7368.5 8662.1 8451.5 7079.6 7767.200000000001 8404.4 7901.5 8496.2 True False 7451.887971796606 6975.348341317366 7646.454589584434 7823.635509922324 8053.703978622736 8382.67378608589 7349.018052105766 7612.277102749477 8051.1922950882745 7402.597941521574 7451.22126184928 1.0000894766003983 0.9361349094586128 1.026201520646657 1.049980296515932 1.0808569086329787 1.1250066923935953 0.9862836968394966 1.0216146904299854 1.080519825160861 0.9934744495406866 1.0 12.863261188628364 -5.9078193457994335 5.820979213750708 1.0436446959475156 0.9688703579737765 0.3076010513561298 0.042294353707607556 0.18358007177882535 9.353676551384034 0.006095203448143613 0.0195118501098897 1.2364616595057796e-06 5.9078193457994335 -0.07477433797373911 KLDVEEPDSANS(ph)SFYSTR ddPTM_A549_PD325901_60min_R1 1 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDSANS(0.5)S(0.5)FYSTR 154.13 7.172399999999999e-23 42299000.0 3315.2 3157.5 3582.7 3767.0 3464.0 3814.3 3862.8 3840.6 4044.6 3421.5 4318.8 True False 3651.7566634787495 3423.593606247214 3825.8435665252646 3999.6790345222735 3220.700590151251 3783.2376054271367 4009.8009678052676 3763.9962201075873 3874.619527475373 3205.465906083158 3787.6149791288653 0.9641309065470633 0.9038916640451733 1.0100930500082645 1.0559888099930848 0.8503241770608897 0.99884429285293 1.05866118649882 0.9937642133238395 1.022970800576599 0.8463019403361851 1.0 11.887073969234796 -7.505349098899714 24.974975079407006 1.0135221835588006 0.958621392945967 0.0 0.07232902903131427 897.5668542400338 1278789.1870905624 0.0074677931692977316 0.011778510406981864 3.123567540664553e-08 7.505349098899714 -0.054900790612833594 KLDVEEPDSANSS(ph)FYSTR ddPTM_A549_MK2206_60min_R1 2 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDSANS(0.201)S(0.799)FYSTR;KLDVEEPDSANS(0.161)S(0.839)FYSTR 211.64 7.999399999999999e-56 42317000.0 8819.4 8972.8 9524.3 7572.3 13091.1 9915.400000000001 8525.4 9559.4 15022.5 15618.6 15464.5 True False 10307.899106371911 9429.477194072491 10874.988955825762 9427.513839933466 11165.416531675308 10964.64104669017 10074.354825434943 10914.47422443469 11619.927736003016 12090.347412411196 11624.237851512713 0.8867591353553127 0.8111910057695002 0.9355442562981067 0.8110221040174795 0.9605289115984755 0.9432567697557301 0.8666679875381182 0.9389410612425091 0.9996292130662884 1.0400980749751112 1.0 13.504848507908749 -8.015497127813042 0.5254820503249791 1.0069049713060878 0.8613026337087535 0.5691556638531654 0.04729968899538536 0.4175087752732053 0.2470581487602531 0.012833480516291455 0.02192431028870774 9.649456934092793e-09 8.015497127813042 -0.14560233759733432 KLDVEEPDSANSS(ph)FYSTR ddPTM_A549_PD325901_60min_R1 1 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDSANS(0.221)S(0.779)FYSTR 194.56 8.0358e-49 38848000.0 4117.0 3662.3 4045.7 4668.4 4949.2 5018.0 4714.3 4850.6 4117.1 4713.9 5204.7 True False 4534.954809224785 3970.934873842969 4320.265530770439 4956.756465294345 4601.585265813098 4977.135071712597 4893.705266263943 4753.850977777916 3944.072604600914 4416.263549520791 4564.554895311659 0.9935152305611931 0.8699500750711952 0.9464812297926061 1.0859232891219084 1.0081125917752625 1.0903878222222079 1.0721100695470571 1.0414708743366603 0.8640651049354114 0.9675124192408813 1.0 12.156258469814713 -8.739336386210994 24.975496296765797 0.9358085051733122 1.0132272911377782 0.16869371179936876 0.06820709263689836 317.8256677596753 359130.14423095353 0.01370272704855658 0.015531396798873252 1.822483536513043e-09 8.739336386210994 0.07741878596446605 KLDYGQHVVAGT(ph)PGR ddPTM_A549_MK2206_60min_R1 5 KLDYGQHVVAGTPGR 15 1 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 KLDY(0.002)GQHVVAGT(0.998)PGR;KLDYGQHVVAGT(1)PGR;KLDYGQHVVAGT(1)PGR;KLDYGQHVVAGT(1)PGR;KLDYGQHVVAGT(1)PGR 100.21 4.7643e-06 77445200.0 7186.610000000001 7842.5 8199.9 6771.2 10506.0 7609.44 7161.070000000001 6547.119999999999 9812.199999999999 9403.4 9925.800000000001 True False 8399.534072254739 8241.649751974142 9362.76912097222 8430.144303970714 8960.581317214042 8414.665890062526 8462.143724608515 7475.19430971409 7589.7523668636195 7279.165409055072 7460.949921856175 1.1257995510262127 1.1046381276238 1.2549030913000552 1.129902276823407 1.2009973811732515 1.127827686580837 1.1341911972655698 1.0019091922619916 1.0172635450386993 0.9756352053418048 1.0 12.8651436095535 -8.183562648191215 3.1051479696760733 1.0074051968766446 1.1590431947220465 0.7702861634678528 0.040768131581055314 0.0876883252413413 1.655591633037073 0.0062040663926739665 0.008074775749807642 6.552957507740615e-09 8.183562648191215 0.15163799784540188 KLDYGQHVVAGT(ph)PGR ddPTM_A549_PD325901_60min_R1 7 KLDYGQHVVAGTPGR 15 1 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 KLDYGQHVVAGT(1)PGR;KLDYGQHVVAGT(1)PGR;KLDYGQHVVAGT(1)PGR;KLDYGQHVVAGT(1)PGR;KLDY(0.046)GQHVVAGT(0.954)PGR;KLDYGQHVVAGT(1)PGR;KLDY(0.003)GQHVVAGT(0.997)PGR 139.0 2.5435e-10 131424300.0 12748.5 11557.660000000002 13016.92 12879.29 16510.9 14795.199999999999 14409.199999999999 15998.5 16231.9 15171.1 16854.2 True False 14042.71833505032 12531.664569811293 13900.326468298766 13674.814492310174 15351.23134351279 14674.712796532918 14957.549991016791 15679.397366919546 15549.729690952756 14213.19415688388 14781.24024757657 0.9500365395490183 0.8478087332262865 0.9404032567955701 0.9251466225611347 1.0385617909180302 0.9927930640961528 1.0119279397727892 1.0607633124351816 1.0519908634528947 0.9615697951472088 1.0 13.851479706134924 -6.7065747031302365 5.027788215432474 1.0253078111774525 0.9107370528019274 0.6354849213281135 0.036410572912096414 0.07911468496580534 4.148443663935981 0.004673532114142109 0.009779058873297018 1.9652839024034217e-07 6.7065747031302365 -0.1145707583755251 KLDYGQHVVAGTPGR ddPTM_A549_MK2206_60min_R1 1 KLDYGQHVVAGTPGR 15 1 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 61.097 0.0016820000000000001 2977300.0 2228.0 2132.4 2138.4 2289.8 2944.0 1974.0 1944.2 1572.7 2701.6 2854.3 2533.7 False True 2604.0319306298193 2240.9300517831894 2441.657274879814 2850.8011027930274 2510.9414998932166 2182.887369764849 2297.4359738675735 1795.6350411917526 2089.6919135686967 2209.5116476025564 1904.5123634374058 1.3672958919152767 1.176642428163917 1.2820380280823849 1.496866682265947 1.318417012195858 1.1461660274155487 1.2063119242350255 0.9428319162763831 1.097232002105287 1.160145604733521 1.0 10.895205938072365 -7.687286964098451 1.5242662736321824 1.0409769113619007 1.323969073342753 0.6010427672017332 0.0968525716076582 0.17295192732740475 0.8171357442872706 0.015289290383593862 0.024806560584430263 2.0545325959498783e-08 7.687286964098451 0.2829921619808522 KLDYGQHVVAGTPGR ddPTM_A549_PD325901_60min_R1 1 KLDYGQHVVAGTPGR 15 1 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 62.376999999999995 0.0015321 2862700.0 1776.8 2597.3 1373.3 1998.4 2575.1 2563.8 1328.4 1434.4 2193.2 2161.1 2014.4 False True 1957.179427988972 2816.183586225142 1466.5003963237623 2121.8366293043055 2394.2338596127265 2542.92126282518 1378.9529889283724 1405.789766734968 2101.0274310584464 2024.6477771843656 1766.6415703337009 1.107853149645562 1.5940888256655215 0.8301063560090206 1.2010566630691883 1.355245964896252 1.4394098415474552 0.7805505157834036 0.7957413605236451 1.189277704283605 1.1460433237750258 1.0 10.78679364930793 -7.748038561881229 24.998957752210938 1.0439003327709968 1.252899051090417 0.2574330161963908 0.21920983884912695 323.09349341071834 602723.0827109833 0.03385955171268939 0.05006314284255437 1.7863289560664477e-08 7.748038561881229 0.20899871831942018 KLEAAEDIAYQLSR ddPTM_A549_MK2206_60min_R1 1 KLEAAEDIAYQLSR 14 1 P35232 P35232 PHB Prohibitin 0 73.208 0.0010728 2590600.0 880.37 931.65 991.05 752.67 1537.4 1012.6 1021.8 1106.8 1413.5 1525.9 1238.2 False True 1028.9549330200057 979.0670056011102 1131.5957923071642 937.0741837886404 1311.2504965814658 1119.75265989052 1207.447833606566 1263.6922894328422 1093.3445068956732 1181.1981302164245 930.7207674184773 1.1055463346692034 1.051944944042379 1.2158273801559734 1.0068263399642252 1.4088548815972557 1.2031026910427247 1.2973255522766955 1.3577566265529046 1.1747288178905284 1.2691219231012665 1.0 9.862204588616546 -10.190498385785755 0.973532314109406 1.0155377588304726 1.2029400422290757 0.0 0.13855209518642247 0.47820542617001194 0.8987994580216384 0.04967365844762134 0.022308234472106125 6.44913716921297e-11 10.190498385785755 0.1874022833986031 KLEAAEDIAYQLSR ddPTM_A549_PD325901_60min_R1 1 KLEAAEDIAYQLSR 14 1 P35232 P35232 PHB Prohibitin 0 90.714 6.853399999999999e-05 4515900.0 2326.8 2246.5 2344.1 2366.6 3311.1 3073.6 2445.6 2846.9 3280.7 2879.1 2645.4 False True 2563.015023100374 2435.8204390924357 2503.184722218401 2512.7795070614316 3078.5397586748854 3048.5696206488333 2538.668646283671 2790.116346150155 3142.823587941565 2697.313134649721 2320.0325705722635 1.104732345403313 1.0499078633588372 1.078943784655989 1.0830794097177803 1.326938163594629 1.3140201820084223 1.09423836479049 1.202619472476604 1.3546463216964022 1.162618649782316 1.0 11.179929343925815 -6.570044886777642 24.99803047438138 1.1892218623637465 1.0760562607370492 0.26694057352685563 0.09960560917612604 191.8958946192382 101704.16223553637 0.019982044481019368 0.04159595731707008 2.691256633040368e-07 6.570044886777642 -0.11316560162669731 KLEAAEER ddPTM_A549_PD325901_60min_R1 2 KLEAAEER 8 1 P16949;A2A2D0;P16949-2;E5RGX5;Q93045;Q93045-2;E5RIR6;E7EVN3;Q9H169-3;Q9H169;Q9H169-4;Q9H169-2 P16949 STMN1;STMN2;STMN4 Stathmin;Stathmin-2;Stathmin-4 0 ; 60.434 0.011420999999999999 7239600.0 5542.9 5287.1 5225.5 4925.3 5801.9 5090.9 5767.0 5341.0 5096.0 5758.0 6352.1 False True 6105.6111275326875 5732.662472079068 5580.133853484176 5229.524594832113 5394.394559468406 5049.441398282518 5986.4663408234865 5234.469565066554 4881.832841817362 5394.438897333575 5570.831969279537 1.095996282279236 1.029049611205642 1.0016697477604664 0.9387331414177326 0.9683283554800974 0.9064070548398808 1.074609030363144 0.939620795229894 0.8763202460132214 0.9683363144107228 1.0 12.443677085893867 -5.336804937039435 0.9498251997771439 0.9480375164986335 1.1642184549830172 0.403659611979332 0.049621735682259596 1.4528716508240005 1.0648801222875164 0.008840561704084489 0.3126435837995795 4.604633438229827e-06 5.336804937039435 0.2161809384843837 KLEDGPK ddPTM_A549_MK2206_60min_R1 3 KLEDGPK 7 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ;; 88.948 0.012849000000000001 117201000.0 39307.0 45477.0 44719.0 39739.0 62105.0 45368.0 48149.0 44546.0 63119.0 58520.0 58756.0 False True 45941.060636115944 47791.58505202776 51060.82663456345 49475.05678395148 52969.436769996 50168.81164715894 56897.05004924894 50860.531916403546 48822.647280331104 45300.29135609487 44165.26361689554 1.0402080022577078 1.0821079993224576 1.1561309149534882 1.1202255513091663 1.1993461021646068 1.135933707592922 1.2882760203311185 1.1515957961348318 1.105453546113418 1.0256995576669699 1.0 15.430624502332654 -9.835964652444327 0.9050602843566619 1.0138325883296229 1.147200271700446 0.4005985555917051 0.061075910296009 0.35905290941081275 0.6066785326879088 0.023014396664684272 0.012879533282966541 1.458932999101113e-10 9.835964652444327 0.13336768337082305 KLEDGPK ddPTM_A549_PD325901_60min_R1 4 KLEDGPK 7 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ;;; 88.948 0.012849000000000001 234732000.0 46641.0 45635.7 49162.799999999996 46013.0 55063.7 53191.899999999994 51912.9 50923.700000000004 52486.5 53136.0 54910.6 False True 51375.95998471054 49481.58059750307 52499.28324793259 48855.118506895 51196.2156714525 52758.72280211826 53888.47381732885 49907.98685463018 50280.67493172036 49780.983891753494 48156.94430697264 1.0668442677180374 1.0275066516281979 1.0901705663316188 1.014497892463274 1.063111798479286 1.0955579420864403 1.1190177157799097 1.0363611639579051 1.044100194796625 1.0337238919153289 1.0 15.555456231509236 -9.731973829810483 0.7779356710867893 1.0051673288462897 1.0642535916498932 0.2483548079871647 0.030381661772037834 0.43676651026728663 0.5569411991305234 0.011712786205914509 0.006451075708891885 1.853643318905803e-10 9.731973829810483 0.05908626280360352 KLEDVKNS(ph)PTFK ddPTM_A549_MK2206_60min_R1 3 KLEDVKNSPTFK 12 2 H0YC42;P55327-2;P55327;P55327-3 H0YC42 TPD52 Tumor protein D52 1 KLEDVKNS(0.997)PT(0.003)FK;KLEDVKNS(0.5)PT(0.5)FK;KLEDVKNS(0.982)PT(0.018)FK 100.41 5.2651e-05 109910500.0 21179.1 18472.3 16436.1 13192.0 20453.2 13964.900000000001 13500.099999999999 13588.7 20434.4 19239.2 18636.6 True False 24753.61430071904 19412.461168427395 18766.986127783442 16424.040592211393 17444.561374190216 15442.656448849622 15952.893421875126 15514.939838648412 15806.041027031437 14893.0513577953 14008.617876006454 1.7670275911456117 1.3857513525068368 1.3396743557354778 1.1724240562191366 1.2452735543646132 1.102368312529914 1.1387913899199698 1.1075282355457736 1.1283083860902192 1.063134956611507 1.0 13.77402700257059 -2.0000000000000004 0.3967197399433029 1.059844063758942 11.743519273557508 0.9381156548448054 0.05077996694630684 10.604170418882314 0.12389160022551685 0.012686014150809917 89.44353995293939 0.00999999999999999 2.0000000000000004 10.683675209798567 up KLEDVKNS(ph)PTFK ddPTM_A549_PD325901_60min_R1 2 KLEDVKNSPTFK 12 2 H0YC42;P55327-2;P55327;P55327-3 H0YC42 TPD52 Tumor protein D52 1 KLEDVKNS(0.87)PT(0.13)FK;KLEDVKNS(0.904)PT(0.096)FK 112.3 1.0759000000000002e-05 200455000.0 19944.4 18614.7 20197.4 19494.0 22294.0 23661.9 23698.0 25728.0 30168.0 39220.0 41375.0 True False 21969.140805708732 20183.426097295334 21568.11702083272 20698.1001059138 20728.146350124716 23469.20533147794 24599.840358043173 25214.834856774443 28900.143872045963 36743.64250667293 36286.13729773473 0.6054417042367368 0.5562296678669996 0.5943899964843923 0.5704134318867261 0.5712414683339341 0.6467815832506117 0.6779404530219559 0.694888922727759 0.7964513730109857 1.012608264285181 1.0 15.14713086794558 -9.15920918733129 0.41577229494621637 1.0108566750708419 0.5569029664607887 0.9759460833578655 0.02449761743380645 0.09789779417299733 0.042650657334830665 0.01623919305034734 0.010736843050880223 6.930918829049353e-10 9.15920918733129 -0.45395370861005313 KLEDVKNSPT(ph)FK ddPTM_A549_MK2206_60min_R1 1 KLEDVKNSPTFK 12 2 H0YC42;P55327-2;P55327;P55327-3 H0YC42 TPD52 Tumor protein D52 1 KLEDVKNS(0.418)PT(0.582)FK 61.641000000000005 0.0027754000000000003 95286000.0 4325.9 4432.3 3958.3 3262.1 4576.8 3123.3 3044.7 3309.6 5099.4 4774.4 4663.1 True False 5056.006161899254 4657.885138116035 4519.646460511026 4061.3146464412357 3903.558782850298 3453.8055329212516 3597.882578764838 3778.7459352249143 3944.39404206848 3695.859724035191 3505.123574987158 1.4424616004922959 1.3288790076775254 1.2894399765998508 1.1586794472591784 1.1136722284790201 0.9853591347157868 1.0264638326704416 1.0780635416652204 1.1253223909753114 1.0544163836074543 1.0 11.775249592772 -6.126423132346797 1.0845226552417528 1.0545086474160108 1.4320727961134414 0.9135794521554673 0.04138048590497494 0.17201402146908956 0.32653420819143536 0.008317826157955368 0.051938243987894935 7.474409152752896e-07 6.126423132346797 0.3775641486974306 KLEELTSNVS(ph)DQETSSEEEEAKDEK ddPTM_A549_MK2206_60min_R1 1 KLEELTSNVSDQETSSEEEEAKDEK 25 2 Q9BV36;H7C3K9;Q9BV36-5;Q9BV36-4;Q9BV36-2;H7C2D8;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 KLEELTS(0.001)NVS(0.999)DQETSSEEEEAKDEK 207.9 4.1321999999999988e-81 5755500.0 1598.2 2141.0 2118.5 1725.2 2299.2 1666.4 2215.8 2483.0 2518.2 2357.2 2943.5 True False 1867.9370877614813 2249.967755049619 2418.9351556457577 2147.8740774471703 1960.9907257318232 1842.7373419332046 2618.382178220231 2834.972853868583 1947.8317207390755 1824.7068828535012 2212.547713532778 0.8442471438407734 1.0169126483862772 1.093280448078311 0.9707696084066169 0.8863043783135898 0.8328576738310892 1.1834240510182972 1.281316030623348 0.8803569336947632 0.8247084895357982 1.0 11.111492851873493 KLEESASFESLSPSSRPAS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 KLEESASFESLSPSSRPASPTR 22 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KLEESASFESLS(0.002)PS(0.043)S(0.043)RPAS(0.869)PT(0.043)R;KLEESASFES(0.001)LS(0.004)PS(0.031)S(0.041)RPAS(0.891)PT(0.031)R 94.08 2.2984999999999998e-07 11387400.0 2613.21 2742.1000000000004 2786.3 2658.7 3362.9 2641.1 2042.24 2541.1 3783.8 4218.4 5246.9 True False 3054.2559611495294 2881.661177543933 3181.439237279101 3310.081619353576 2868.2218648066923 2920.579448979708 2413.2885728172573 2901.308706792373 2926.7753414869817 3265.4605101939633 3943.9499229268345 0.7744155024369436 0.7306535919212257 0.8066631928526443 0.8392808438341276 0.7272460149996437 0.7405214330947499 0.611896352635821 0.735635280236847 0.7420924197016681 0.8279670315313337 1.0 11.945425518324216 -10.549296325339952 0.8065421438204752 1.0035401842138383 0.7446395616442265 0.3734645114606079 0.07286889616050364 0.27172009392086394 0.3106312051591111 0.04248439360694673 0.011309289032569284 2.8229531762994037e-11 10.549296325339952 -0.25890062256961177 KLEESASFESLSPSSRPAS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 KLEESASFESLSPSSRPASPTR 22 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KLEESASFESLS(0.003)PS(0.051)S(0.051)RPAS(0.863)PT(0.032)R;KLEESASFESLSPS(0.038)S(0.038)RPAS(0.897)PT(0.028)R 112.11 2.1733e-11 16016900.0 4328.0 3837.7 3260.3 3498.8999999999996 4451.4 4542.5 3683.1 4134.3 4521.9 4605.700000000001 4849.9 True False 4767.375373894799 4161.116447409322 3481.563563776567 3715.019106421554 4138.749020496329 4505.507386061075 3823.2623859696514 4051.8381432043925 4331.8602683308345 4314.895315986322 4253.393046049153 1.1208405436039044 0.9783051795023873 0.8185379357335635 0.8734248319403075 0.9730464538988906 1.059273699204945 0.8988735215808384 0.9526131489230748 1.018448147498282 1.014459578334595 1.0 12.054398461841958 -8.756037811911671 24.203549649379415 1.0087116267273961 0.9542069106915956 0.075924224211672 0.07859061047080884 170.34758324888725 763297.392451081 0.013598659395982255 0.01519495851836787 1.7537278066303547e-09 8.756037811911671 -0.05450471603580054 KLEEVLS(ph)TEGAEENGNSDK ddPTM_A549_MK2206_60min_R1 2 KLEEVLSTEGAEENGNSDK 19 1 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.854)T(0.146)EGAEENGNSDK;KLEEVLS(0.595)T(0.405)EGAEENGNSDK 155.97 8.110300000000001e-27 24127000.0 5173.299999999999 4715.2 5177.6 4909.4 5740.7 4431.4 4290.200000000001 5087.4 6933.9 6529.1 7386.0 True False 6046.4265649583685 4955.183539752432 5911.861534987718 6112.203220391338 4896.250634659308 4900.327806674747 5069.673806751707 5808.554529509076 5363.382721163005 5054.171775343113 5551.852356770209 1.08908273786947 0.892527974687553 1.0648448761031075 1.1009304332341996 0.8819129760697929 0.8826473565528161 0.9131499688693074 1.0462372116985121 0.9660528372341577 0.9103577419849433 1.0 12.438753486766359 -5.221731253549893 22.743934352804537 0.9785222894078199 1.0890837365529984 0.1633723175205566 0.07536442703510182 10212.474958667442 5849099.238085406 0.009696638341033584 3.5250348774016165 6.001623487749835e-06 5.221731253549893 0.11056144714517846 KLEEVLS(ph)TEGAEENGNSDK ddPTM_A549_PD325901_60min_R1 1 KLEEVLSTEGAEENGNSDK 19 1 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.5)T(0.5)EGAEENGNSDK 153.59 2.1635e-22 19618000.0 5166.6 5264.3 5416.4 4789.4 6882.3 5313.5 5902.8 6044.6 5023.8 5515.9 5990.7 True False 5691.109428550107 5707.941036062455 5783.989475459132 5085.230360483405 6398.910990646062 5270.228617685308 6127.434284136102 5924.035711103037 4812.6671567351 5167.625132650618 5253.881878176178 1.083219904922131 1.0864235566034268 1.1008982709498931 0.9678996365728499 1.2179396375899045 1.003111364109085 1.1662679950206964 1.1275540349908846 0.9160211950569699 0.9835822830574366 1.0 12.359168049715832 -8.758775192781505 24.999962197133417 0.9603433397287319 1.0934161274557437 0.41381932190288706 0.06753736430709573 44.96710429950137 421957.6431114274 0.011152593508099391 0.012366523600616573 1.7427087317805102e-09 8.758775192781505 0.1330727877270118 KLEEVLS(ph)TEGAEENGNSDKK ddPTM_A549_MK2206_60min_R1 4 KLEEVLSTEGAEENGNSDKK 20 2 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.824)T(0.176)EGAEENGNSDKK;KLEEVLS(0.805)T(0.195)EGAEENGNSDKK;KLEEVLS(0.845)T(0.155)EGAEENGNSDKK;KLEEVLS(0.902)T(0.098)EGAEENGNSDKK 181.37 2.9614e-44 46008200.0 10348.3 11773.300000000001 10585.400000000001 10371.8 14132.900000000001 9775.099999999999 9136.8 8802.4 14990.599999999999 13974.599999999999 13939.5 True False 12094.840048355725 12372.51068216986 12086.568891466894 12912.891465607787 12053.96913173942 10809.49459381377 10796.838291345157 10050.167156219422 11595.253035069169 10817.728154218781 10477.93743937156 1.154314970702969 1.1808154757327822 1.1535255828165942 1.2323886776692063 1.1504143063925745 1.0316433607626212 1.0304354605874344 0.959174189994229 1.106635070323976 1.0324291604920672 1.0 13.35506713279448 -7.183225731048136 4.29680623866497 1.041042882741008 1.1794244346959164 0.772257604280034 0.03965294294619548 0.10955072557851674 3.8045562651708638 0.007216399670303564 0.012689809760469564 6.558043136089981e-08 7.183225731048136 0.1383815519549083 KLEEVLS(ph)TEGAEENGNSDKK ddPTM_A549_PD325901_60min_R1 3 KLEEVLSTEGAEENGNSDKK 20 2 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.977)T(0.023)EGAEENGNSDKK;KLEEVLS(0.836)T(0.164)EGAEENGNSDKK;KLEEVLS(0.5)T(0.5)EGAEENGNSDKK 174.4 3.1414e-35 45675500.0 9669.2 9799.800000000001 10592.3 10032.6 12572.2 11584.599999999999 10220.099999999999 11311.3 10850.1 10957.9 11339.9 True False 10650.810065911182 10625.66353840109 11311.157174674272 10652.29091631223 11689.172043735445 11490.258858461892 10609.031498153301 11085.687247956812 10394.108029239123 10266.016323913089 9945.164189548806 1.0709536678242 1.0684251497393484 1.137352481979228 1.071102569378043 1.1753623993477538 1.1553614037400004 1.066752775112767 1.114681169327155 1.0451419233643326 1.0322621254158337 1.0 13.27977947407128 -9.03540959253043 1.0723510537857903 1.0119107504957265 1.1109920475715875 0.4880627717790528 0.036946302912682576 0.23227463134561935 0.5494381568478317 0.00865646131847465 0.008047099212153231 9.217017402384882e-10 9.03540959253043 0.099081297075861 KLEEVLST(ph)EGAEENGNSDK ddPTM_A549_PD325901_60min_R1 1 KLEEVLSTEGAEENGNSDK 19 1 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.236)T(0.764)EGAEENGNSDK 216.25 1.1544999999999998e-66 18291000.0 5298.1 4841.5 5090.7 5484.3 6466.9 5554.4 5687.8 5149.8 6979.7 5583.6 6073.6 True False 5835.959211744919 5249.510196245728 5436.18551486593 5823.052755250998 6012.687253593858 5509.166807955451 5904.252341483588 5047.083199060053 6686.36748156057 5231.0505430968615 5326.585703722577 1.0956285200980354 0.9855300352300757 1.0205759969405461 1.0932054939398528 1.1288070047181982 1.034277324047424 1.108449703035342 0.9475268924205633 1.255282061243788 0.9820644656934837 1.0 12.378995358610021 -6.310611897112053 5.516307485379531 1.1028997333105326 1.0290367702000012 0.0 0.08760051524889417 0.3942984879220659 28.647504643545947 0.014476044913140427 0.03469689839379923 4.890892337754066e-07 6.310611897112053 -0.07386296311053142 KLEEVLST(ph)EGAEENGNSDKK ddPTM_A549_PD325901_60min_R1 1 KLEEVLSTEGAEENGNSDKK 20 2 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.455)T(0.545)EGAEENGNSDKK 76.02 0.00063939 4598600.0 1877.9 1547.7 2158.8 2257.5 2468.4 2194.8 2360.6 1914.4 2403.5 2225.3 2727.4 True False 2068.5430255630868 1678.1301106536232 2305.3091499189836 2396.940647845511 2295.0280995177113 2176.9262764836203 2450.433924769885 1876.2157901822527 2302.4892533963957 2084.7941782279267 2391.947090413092 0.8647946410912655 0.7015749292196125 0.9637793240321441 1.0020876537998826 0.9594811309648815 0.910106366988102 1.0244515585613108 0.7843884999388627 0.9626004114492153 0.8715887515170246 1.0 11.223969762307272 -5.77872726800292 24.831967881061207 0.9656701240737383 0.7831848217171073 0.3613137793987198 0.07635642913368805 109.78665048989588 157695.9378905909 0.009306557938133415 0.029035909122232462 1.6644575826714896e-06 5.77872726800292 -0.18248530235663096 KLEFGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KLEFGSPK 8 1 Q8WYL5;Q8WYL5-4;Q8WYL5-2;Q8WYL5-5 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 KLEFGS(1)PK;KLEFGS(1)PK 74.611 0.0020884000000000002 56367000.0 7366.3 7803.799999999999 7810.8 6984.099999999999 10706.5 7910.5 8216.6 8373.9 11098.6 10740.599999999999 10745.2 True False 8609.551351256026 8200.980087275208 8918.48889011937 8695.204813528157 9131.588032814789 8747.583859435073 9709.44986260689 9560.925968993208 8584.784820822304 8314.291000329336 8076.870287566643 1.0659514198846776 1.0153660756319953 1.1042010794513186 1.076556203572238 1.1305849552730536 1.083041270688835 1.2021302208546552 1.1837414281260759 1.0628850675041215 1.0293951375111439 1.0 12.97958065495387 -9.445678214439663 1.5706228289283015 1.0172210463069806 1.1054495653577898 0.31113913442426844 0.05127111954965531 0.2925148169899995 1.4760597458066782 0.012805034749218342 0.010535451116115526 3.5836186290769e-10 9.445678214439663 0.0882285190508092 KLEFGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KLEFGSPK 8 1 Q8WYL5;Q8WYL5-4;Q8WYL5-2;Q8WYL5-5 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 KLEFGS(1)PK;KLEFGS(1)PK 84.479 0.0013200999999999998 120179000.0 11691.1 12551.900000000001 11848.8 12806.5 12928.5 13801.7 12451.0 12996.8 11815.2 12508.099999999999 12127.099999999999 True False 12877.971865467061 13609.692663896878 12652.930820622587 13597.52841932825 12020.446760903716 13689.30353113906 12924.829618448626 12737.568628207648 11318.648232464773 11718.336431354293 10635.543580020762 1.2108428467783048 1.2796424142780214 1.1896835103371264 1.2784986791715733 1.1302146120189422 1.2871277737843971 1.2152486162276057 1.197641524607695 1.0642284663030526 1.101808886700215 1.0 13.376606150521686 -8.806301344123602 1.74813853097655 1.0229968950048673 1.229703939902285 0.6841310799395266 0.05028137953090275 0.09431228250391163 0.5659187877974546 0.00812289016811038 0.008599852398874303 1.5620633968316945e-09 8.806301344123602 0.20670704489741776 KLEGARS(ph)PLNGDQQNGACDGNFSPTSK ddPTM_A549_MK2206_60min_R1 2 KLEGARSPLNGDQQNGACDGNFSPTSK 27 2 Q96JK9 Q96JK9 MAML3 Mastermind-like protein 3 1 KLEGARS(1)PLNGDQQNGACDGNFSPTSK;KLEGARS(1)PLNGDQQNGACDGNFSPTSK 160.86 9.8959e-42 9339100.0 1570.6399999999999 2037.5 2068.5 1721.01 1909.21 1694.99 1649.15 1798.1 2399.4 2831.6 2925.4 True False 1835.7256335387879 2141.200047133862 2361.8444038013936 2142.657527259075 1628.367738115194 1874.3527167566983 1948.7792080566344 2052.9861814503015 1855.9397310544596 2191.939593368391 2198.9424430673666 0.8348220479013915 0.9737408334103742 1.074081957555374 0.9744036429940484 0.7405231288563142 0.8523882572124585 0.8862347508005837 0.9336243374276469 0.8440146930201398 0.9968153556173998 1.0 11.102594127059602 KLEGARS(ph)PLNGDQQNGACDGNFSPTSK ddPTM_A549_PD325901_60min_R1 2 KLEGARSPLNGDQQNGACDGNFSPTSK 27 2 Q96JK9 Q96JK9 MAML3 Mastermind-like protein 3 1 KLEGARS(1)PLNGDQQNGACDGNFSPTSK;KLEGARS(1)PLNGDQQNGACDGNFSPTSK 227.58 2.7131999999999994e-96 19209700.0 2730.8 3048.2 2991.6000000000004 3058.9 3226.7 3196.3 3644.8 3699.2000000000003 2729.0 3278.7 3537.7 True False 3008.028805691292 3305.0825116588308 3194.62796595221 3247.841305734056 3000.067723510693 3170.270392529886 3783.504858511089 3625.4165540337394 2614.3096203531377 3071.6823224535588 3102.585327328005 0.9695233130886535 1.0652672410158077 1.0296664326403793 1.046817722344851 0.9669573620057046 1.0218156982197077 1.2194684301461267 1.1685146971142306 0.8426229561926737 0.9900395954940391 1.0 11.599255172574587 -8.767954962647314 24.999843362612438 0.9256830673605515 1.0604695201012155 0.28184824943672737 0.0815677611266472 137.9814064685097 529424.2909449348 0.016075547865872973 0.01731338588155848 1.7062593229079157e-09 8.767954962647314 0.13478645274066403 KLEGIRPES(ph)PAQGSGSR ddPTM_A549_PD325901_60min_R1 2 KLEGIRPESPAQGSGSR 17 2 Q9ULE6 Q9ULE6 PALD1 Paladin 1 KLEGIRPES(0.994)PAQGS(0.006)GSR;KLEGIRPES(0.993)PAQGS(0.004)GS(0.004)R 74.0 0.00011038 22579000.0 3849.6000000000004 4170.6 4076.2999999999997 4182.0 5422.4 4556.3 4048.6000000000004 4702.9 4243.0 4797.2 4855.2 True False 4240.408558074263 4522.071098721973 4352.942230783186 4440.31264198889 5041.549330264479 4519.195003436449 4202.671688478926 4609.096970146323 4064.681465429958 4494.303973304727 4258.041179648619 0.9958589828443578 1.0620073662827145 1.022287490216898 1.0428064113638547 1.1840067104941707 1.061331915960799 0.9869964876257344 1.082445372340592 0.9545895152111663 1.0554862632107296 1.0 12.055974186868351 -8.762665566348796 24.999993818569315 0.9785561581200217 1.055755288102767 0.10350842101593127 0.05542117253337753 28.570123815805125 582500.088987927 0.008889643714435286 0.009725577358273093 1.7271674059035235e-09 8.762665566348796 0.07719912998274525 KLEGNS(ph)PQGSNQGVK ddPTM_A549_MK2206_60min_R1 1 KLEGNSPQGSNQGVK 15 1 P61006 P61006 RAB8A Ras-related protein Rab-8A 1 KLEGNS(0.969)PQGS(0.031)NQGVK 76.768 0.00025023 25742000.0 1035.8 1789.9 1348.3 1328.5 1888.4 1480.0 1298.5 1186.1 2530.0 2167.9 2461.0 True False 1210.617717121349 1880.9982647189697 1539.5092142351539 1653.982559638631 1610.6188615483543 1636.6126176555108 1534.4206419437537 1354.2333072789074 1956.9590395798039 1678.1698843280599 1849.865779855333 0.6544354354271175 1.0168295912074612 0.8322275221262538 0.8941094957537834 0.8706679582311703 0.8847196566788217 0.8294767429363181 0.7320711167405962 1.057892448679626 0.9071846739385058 1.0 10.853204882018906 -8.779834045667755 24.98946896425287 1.027338120192475 0.8490547755604327 0.30087335726106834 0.09547183800208577 142.71521952964397 193880.32550300905 0.014206614378462849 0.015137595659706262 1.6602211965585757e-09 8.779834045667755 -0.1782833446320422 KLEGNSPQGS(ph)NQGVK ddPTM_A549_MK2206_60min_R1 1 KLEGNSPQGSNQGVK 15 1 P61006 P61006 RAB8A Ras-related protein Rab-8A 1 KLEGNS(0.361)PQGS(0.639)NQGVK 151.95 1.3016999999999998e-14 27035000.0 2983.6 2533.7 2756.9 2176.9 3780.1 2521.8 2426.3 2651.0 3778.4 3873.0 3968.5 True False 3487.158737983453 2662.6545076923026 3147.869875194615 2710.2405977247563 3224.0522974681894 2788.6552021646385 2867.1273034640953 3026.787368347007 2922.598432864953 2998.08661008468 2983.011924971915 1.1690059663493584 0.8926060554442374 1.0552656021394389 0.9085584187700735 1.0808043610145956 0.9348454757487749 0.9611518074943965 1.0146749139715572 0.9797474855526999 1.0050535115151802 1.0 11.542554029704792 -5.241374358727913 24.61062503960508 0.98647617648897 1.1690061792733677 0.4850309927856441 0.05492811856097448 2217.5554574738003 2719879.662000903 0.006217097435754155 0.3442439842934809 5.736217911675039e-06 5.241374358727913 0.18253000278439768 KLEGNSPQGS(ph)NQGVK ddPTM_A549_PD325901_60min_R1 1 KLEGNSPQGSNQGVK 15 1 P61006 P61006 RAB8A Ras-related protein Rab-8A 1 KLEGNSPQGS(1)NQGVK 167.63 1.7875e-27 49266000.0 5732.2 5431.3 5930.9 6232.8 6793.4 7392.9 6188.3 7359.9 6396.4 7165.1 7608.9 True False 6314.128724177394 5889.014712149005 6333.406539398966 6617.785900284159 6316.25501995771 7332.694673508184 6423.799142867691 7213.101020770141 6127.581552080179 6712.694363196384 6673.053536791147 0.9462128078795022 0.8825067384339973 0.9491017125039422 0.9917177891347227 0.9465314469805662 1.0988514677846024 0.9626476256260768 1.0809295895801676 0.9182575140895292 1.005940432844826 1.0 12.704131363060187 -5.995070476604385 5.595992563377736 0.9794172907191375 0.9140580159321874 0.2210598843077547 0.05476665964778501 0.21013123236560471 23.149938800015555 0.007898110323844305 0.02392218419424138 1.0114153101050567e-06 5.995070476604385 -0.06535927478695014 KLEKEEEEGISQES(ph)S(ph)EEEQ ddPTM_A549_MK2206_60min_R1 2 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KLEKEEEEGISQES(1)S(1)EEEQ;KLEKEEEEGIS(0.002)QES(0.999)S(0.999)EEEQ 106.94 1.0735e-09 14683600.0 2501.98 2510.93 2640.57 2254.7599999999998 3373.72 2876.13 2737.67 2673.67 4330.87 4145.2 4186.13 True False 2924.253056461938 2638.7256119508343 3015.0425319535148 2807.176301220022 2877.450257139858 3180.480167579422 3235.069202025533 3052.670910270971 3349.934859978255 3208.79644103357 3146.5983896894745 0.9293378735729032 0.8385962506677694 0.9581910871857585 0.8921304702940026 0.9144637798609635 1.010767747800599 1.0281163343329585 0.9701495177375423 1.0646210431413992 1.0197667587792267 1.0 11.619577339314567 -7.272766887629556 3.5018038695122455 1.025491644753365 0.9032921614408892 0.7071866036531811 0.034764656561150215 0.09901227175251426 2.606603790593389 0.00554570143445824 0.00948421803913175 5.336212457403106e-08 7.272766887629556 -0.12219948331247588 KLEKEEEEGISQES(ph)S(ph)EEEQ ddPTM_A549_PD325901_60min_R1 8 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KLEKEEEEGIS(0.002)QES(0.999)S(0.999)EEEQ;KLEKEEEEGISQES(1)S(1)EEEQ;KLEKEEEEGIS(0.041)QES(0.962)S(0.998)EEEQ;KLEKEEEEGIS(0.002)QES(0.999)S(0.999)EEEQ;KLEKEEEEGIS(0.002)QES(0.999)S(0.999)EEEQ;KLEKEEEEGIS(0.02)QES(0.981)S(1)EEEQ;KLEKEEEEGISQES(1)S(1)EEEQ;KLEKEEEEGIS(0.002)QES(0.999)S(0.999)EEEQ 131.77 1.2131000000000002e-16 483626000.0 51211.81 56485.149999999994 56086.7 55677.02 67802.8 62058.399999999994 61687.7 66341.2 61975.39 66505.79999999999 67804.3 True False 56410.79525105809 61245.35182515114 59893.0807387257 59116.063073713114 63040.56523496164 61553.016965796975 64035.25918030465 65017.972722335464 59370.779883524185 62306.61243804922 59464.80094687118 0.9486417906528991 1.0299429385103096 1.0072022404016312 0.9941353898843511 1.0601324519909723 1.0351168419918113 1.0768598929224862 1.0933858633517628 0.9984188787005106 1.047789809196823 1.0 15.85974832484402 -5.254846457967147 23.75384255714194 1.0176359277005418 0.9486417259393126 0.22056781946253234 0.03536722364201199 455.0504624187903 1639424.0093022918 0.005323862558038525 0.06704746936095499 5.561008284067332e-06 5.254846457967147 -0.06899420176122917 KLEKEEEEGISQES(ph)SEEEQ ddPTM_A549_MK2206_60min_R1 7 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KLEKEEEEGISQES(0.5)S(0.5)EEEQ;KLEKEEEEGISQES(0.612)S(0.388)EEEQ;KLEKEEEEGISQES(0.513)S(0.487)EEEQ;KLEKEEEEGISQES(0.612)S(0.388)EEEQ;KLEKEEEEGISQES(0.896)S(0.104)EEEQ;KLEKEEEEGIS(0.017)QES(0.864)S(0.119)EEEQ;KLEKEEEEGIS(0.025)QES(0.799)S(0.176)EEEQ 214.39 8.443499999999998e-67 996850700.0 23333.420000000002 27335.07 24295.390000000003 21215.79 31786.419999999995 24997.289999999997 24946.489999999998 24759.63 37117.11 33934.56 34599.170000000006 True False 27271.53084865189 28726.308305476043 27740.841629041508 26413.659502413 27110.67972521595 27642.486635941812 29478.944320403076 28269.383375686757 28710.143848845037 26268.719327424526 26007.24120048649 1.048612985838027 1.1045503859493828 1.0666583746884537 1.0156271208773542 1.0424281266983757 1.062876543607583 1.133489865116937 1.086981243329952 1.103928849181742 1.0100540509053741 1.0 14.666625748554667 -10.910847318428576 1.1777173776697916 1.0002175228127168 1.0761983644573732 0.41367895710857794 0.03146710724121448 0.3848240178254567 0.9524545190424722 0.02348897727192326 0.0056444185452934 1.2278708283925242e-11 10.910847318428576 0.07598084164465635 KLEKEEEEGISQES(ph)SEEEQ ddPTM_A549_PD325901_60min_R1 6 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KLEKEEEEGISQES(0.968)S(0.032)EEEQ;KLEKEEEEGISQES(0.619)S(0.381)EEEQ;KLEKEEEEGIS(0.001)QES(0.5)S(0.5)EEEQ;KLEKEEEEGIS(0.083)QES(0.804)S(0.113)EEEQ;KLEKEEEEGIS(0.001)QES(0.858)S(0.141)EEEQ;KLEKEEEEGIS(0.001)QES(0.883)S(0.116)EEEQ 218.57 3.2652999999999994e-67 1917779400.0 53412.64 62506.25 57508.399999999994 57323.34 69983.0 67828.87 65293.51 67631.14 65090.5 65495.9 70348.2 True False 58835.051892492666 67773.87105320343 61411.26585010229 60864.072521049144 65067.63550824333 67276.49417131011 67778.29025302953 66282.18385709694 62354.97264331104 61360.4776963998 61695.817373981954 0.9536311276314217 1.0985164625079542 0.9953878312016713 0.986518618468234 1.0546522969915837 1.090454702358504 1.098588091347869 1.0743383697360516 1.0106839539110646 0.994564628659518 1.0 15.912885065709336 -2.0015113404226295 6.447373063605404 1.0242210300550132 0.0006438250466374029 0.0 0.050235945633409454 0.0 0.0 0.006720274186575056 0.0 0.009965260582194976 2.0015113404226295 -1.0235772050083758 KLEKEEEEGISQESS(ph)EEEQ ddPTM_A549_MK2206_60min_R1 2 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KLEKEEEEGISQES(0.101)S(0.899)EEEQ;KLEKEEEEGISQES(0.06)S(0.94)EEEQ 212.36 1.0958999999999999e-66 414420000.0 25624.0 28239.0 27637.0 23108.0 34707.0 25583.0 24347.0 27736.0 38136.0 37807.0 35655.0 True False 29948.704753347614 29676.244481478814 31556.342174454476 28769.46103735754 29601.6462760849 28290.176079379013 28770.53474732733 31667.66293793759 29498.25689067804 29266.372441898136 26800.87947206089 1.1174523128828007 1.107286218439787 1.1774368153608918 1.0734521256046408 1.1045027946543218 1.0555689453725081 1.0734921880947879 1.1815904388865364 1.100645108360309 1.09199298748414 1.0 14.709992723111698 -10.430165398849121 0.7246126270272801 0.9973650256868045 1.110299317631127 0.11538477886139387 0.04612266209683277 0.4461786984768856 0.41444832229184114 0.028169531668478992 0.007768306856928367 3.713937587317858e-11 10.430165398849121 0.11293429194432258 KLEKEEEEGISQESS(ph)EEEQ ddPTM_A549_PD325901_60min_R1 1 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KLEKEEEEGIS(0.001)QES(0.194)S(0.805)EEEQ 45.093999999999994 0.012778 4268100.0 407.33 721.9 757.93 714.65 723.13 757.33 651.46 507.13 817.45 815.39 874.74 True False 448.68184173950283 782.7370465082707 809.3676876033421 758.7923074120899 672.3398434630699 751.162555571961 676.2516667925903 497.0148943142115 783.0954192589486 763.906136244672 767.152525433728 0.5848665380927083 1.0203147621338164 1.055028381931933 0.9891022740009734 0.8764096071807187 0.9791567265548312 0.8815087539603096 0.6478697232120982 1.0207819088077783 0.9957682610935543 1.0 9.583369632966342 KLEKEEEEGISQESSEEEQ ddPTM_A549_MK2206_60min_R1 2 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 0 ; 131.71 7.2608e-17 8068000.0 956.54 1253.63 1006.39 926.8 1542.79 1272.74 936.26 1186.01 1861.4099999999999 1509.9499999999998 1609.77 False True 1117.9805668423016 1317.4344123133367 1149.1112349730156 1153.866041605633 1315.8476347215556 1407.4205020235627 1106.3663228542607 1354.1305495032937 1439.8036070609667 1168.8512462941803 1210.0196816081743 0.9239358531395553 1.0887710607834107 0.9496632595643333 0.9535927879058046 1.0874596956743139 1.1631385203197961 0.9143374605145651 1.1190979535998862 1.1899009817322959 0.9659770531506734 1.0 10.240814798548389 -6.7722796912123835 24.137584828555454 1.085901791268221 0.9847373744306596 0.1406637286983634 0.08831820313161312 167.12589536895265 372131.7554817448 0.013421567388609515 0.025557354466029577 1.6893526165001943e-07 6.7722796912123835 -0.10116441683756139 KLELDGEKETAPEEPGS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 KLELDGEKETAPEEPGSPAK 20 2 P35612 P35612 ADD2 Beta-adducin 1 KLELDGEKETAPEEPGS(1)PAK;KLELDGEKETAPEEPGS(1)PAK 155.87 2.1813999999999998e-27 166640000.0 4590.9 5004.9 5388.2 4944.299999999999 7020.0 5414.299999999999 4994.200000000001 4949.9 7849.200000000001 7212.700000000001 7139.4 True False 5365.731683271292 5259.62803234369 6152.327781756182 6155.653721958064 5987.367299337767 5987.237632278531 5901.581494028104 5651.563483432988 6071.368732596762 5583.346060562295 5366.489942583975 0.9998587047919971 0.98008718708437 1.1464342330983341 1.1470539939173174 1.1156952427744304 1.1156710804149323 1.099709783707613 1.053121042599355 1.1313481992054917 1.0404093029705566 1.0 12.389763058505634 -5.737732890787847 24.84431163548633 1.0821429173365669 0.9899728384927421 0.41913495238494036 0.045580461378789267 222.80525531948084 233495.1076731532 0.008118585288643048 0.03140435157296644 1.8292249198237311e-06 5.737732890787847 -0.09217007884382478 KLELDGEKETAPEEPGS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 KLELDGEKETAPEEPGSPAK 20 2 P35612 P35612 ADD2 Beta-adducin 1 KLELDGEKETAPEEPGS(1)PAK;KLELDGEKETAPEEPGS(1)PAK 163.16 8.075099999999999e-28 302070000.0 8159.1 7489.3 9399.4 9285.7 9911.8 8140.5 9229.599999999999 9877.6 9311.8 9046.0 9443.5 True False 8987.405825588043 8120.449594700632 10037.29980718384 9859.256599645203 9215.629361853686 8074.206466974178 9580.837478630916 9680.583519172698 8920.45742865677 8474.834016199977 8282.00936727874 1.0851721396375427 0.9804926841526631 1.2119401659747027 1.1904425801059806 1.1127286813105488 0.9749091203487926 1.156825240561028 1.1688689410832547 1.0770885461564996 1.0232823509815219 1.0 13.015765119115706 -9.899999850647648 0.850119903627576 1.0078471549177963 1.1082767645456975 0.1964312081228088 0.073590599564759 0.6109175738215771 0.9064720309346506 0.029874270790458502 0.015357999891968227 1.2589258447342846e-10 9.899999850647648 0.10042960962790115 KLELSENR ddPTM_A549_PD325901_60min_R1 2 KLELSENR 8 1 Q92688;Q92688-2 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 ; 65.347 0.0090851 13304300.0 4459.6 5300.4 4138.6 5416.8 6492.0 4983.799999999999 4948.700000000001 5145.1 5661.1 6106.7 6160.3 False True 4912.335309015997 5747.08330975542 4419.470283423521 5751.3834335546235 6036.024316184161 4943.213585173626 5137.025486532545 5042.47694424713 5423.1836540055465 5721.121919824061 5402.622153359164 0.9092502065800911 1.0637581431050256 0.8180232039132418 1.0645540758349372 1.11723976706962 0.9149656305503626 0.9508393037144972 0.9333388123601964 1.0038058372513794 1.0589528116947553 1.0 12.399444071469812 KLENS(ph)PLGEALR ddPTM_A549_MK2206_60min_R1 3 KLENSPLGEALR 12 1 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4 D6RDK6 OCIAD1 OCIA domain-containing protein 1 1 KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR 133.86 2.0069999999999997e-08 279041700.0 5432.73 5865.7 5177.389999999999 4134.31 7305.6 6318.4 5230.2 5454.89 8712.3 7804.700000000001 8422.8 True False 6349.642006503833 6164.239075569618 5911.621753829968 5147.216135596227 6230.955917669803 6987.008894185523 6180.459639194624 6228.137362400001 6738.977960684239 6041.612849400443 6331.186302545912 1.0029150467346852 0.9736309723014845 0.9337305003096769 0.8129939460992351 0.9841687828968475 1.1035860516971188 0.9761929824603839 0.9837235969340417 1.0644099918485015 0.9542623705404112 1.0 12.62826013383337 -6.996188956920949 24.999940464162187 1.0279511857505756 0.9296459726509682 0.28231870202707465 0.05940890280493858 89.20247773591834 585146.7627756541 0.008159069684503339 0.01536862965416144 1.0088138663680706e-07 6.996188956920949 -0.09830521309960749 KLENS(ph)PLGEALR ddPTM_A549_PD325901_60min_R1 6 KLENSPLGEALR 12 1 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4 D6RDK6 OCIAD1 OCIA domain-containing protein 1 1 KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR 153.72 1.4545e-13 528179500.0 18835.7 20652.199999999997 20219.4 20041.5 23002.399999999998 20289.2 21041.9 21994.6 21576.100000000002 20568.0 24449.500000000004 True False 20747.88639789054 22392.6333729022 21591.610073129454 21279.417937451075 21386.790777972048 20123.971482062825 21842.6610190695 21555.90044857009 20669.331549908868 19269.332969843163 21442.366498150222 0.967611779216646 1.0443172573714732 1.0069602193858642 0.9924006260823307 0.9974081349564206 0.9385144817760143 1.0186683928265945 1.0052948423593853 0.96394824478408 0.898657010246769 1.0 14.388176517935491 -6.472204472839401 2.367723707576589 0.9845103873412017 1.0098832762635304 0.08938517361268106 0.036780295462191206 0.454335204473178 5.001647125870221 0.0037807331560347967 0.00986908469344727 3.371285457366074e-07 6.472204472839401 0.025372888922328696 KLEPGGFGEKPVRPGGGDT(ph)SPR ddPTM_A549_MK2206_60min_R1 2 KLEPGGFGEKPVRPGGGDTSPR 22 3 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 KLEPGGFGEKPVRPGGGDT(0.5)S(0.5)PR;KLEPGGFGEKPVRPGGGDT(0.592)S(0.408)PR 110.83 8.5381e-11 53838000.0 4311.1 4946.4 4626.4 4141.799999999999 6470.799999999999 4903.3 4790.1 5101.6 7102.1 6303.6 6084.200000000001 True False 5038.708283724511 5198.150632217391 5282.493086655431 5156.541185932468 5518.953891816925 5422.163951452879 5660.399165941299 5824.767422994754 5493.485689723214 4879.612381959668 4573.325224622434 1.101760324543833 1.136623873638145 1.1550661339838444 1.1275255820797618 1.2067704833461872 1.185606464692334 1.2376988051202091 1.2736394498328374 1.2012016246180584 1.0669725292415697 1.0 12.159027802378223 -10.645969280099939 0.9654910166779562 1.002213266922437 1.1818092006963652 0.5427043354691762 0.05091341255584529 0.28256527991924846 0.47778212598134806 0.03383281993202535 0.009536976940583182 2.2595955974784216e-11 10.645969280099939 0.17959593377392813 KLEPGGFGEKPVRPGGGDT(ph)SPR ddPTM_A549_PD325901_60min_R1 3 KLEPGGFGEKPVRPGGGDTSPR 22 3 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 KLEPGGFGEKPVRPGGGDT(0.804)S(0.196)PR;KLEPGGFGEKPVRPGGGDT(0.646)S(0.354)PR;KLEPGGFGEKPVRPGGGDT(0.5)S(0.5)PR 57.351000000000006 0.00097185 148956000.0 8098.1 6881.4 8497.7 7737.1 8626.5 8525.4 8150.8 8378.599999999999 7536.700000000001 9478.0 9075.6 True False 8920.213150493872 7461.319728275395 9074.405022821256 8215.003094770986 8020.6043998094065 8455.971968987362 8460.983154288899 8211.48225011545 7219.95870858024 8879.557462474397 7959.358734968492 1.1207200790314904 0.9374272446717319 1.1400924779221147 1.0321187131168432 1.0076947989002982 1.06239362372713 1.063023220340174 1.0316763603127075 0.9071030655849465 1.1156121690385836 1.0 12.958436485889765 -8.624112897264261 6.720542880662048 0.9562753500350419 1.048718969115996 0.0 0.07262334798129104 0.17181563278067083 10.016611319961996 0.009380057216819419 0.010635430640206715 2.3762224940853177e-09 8.624112897264261 0.092443619080954 KLEPGGFGEKPVRPGGGDTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KLEPGGFGEKPVRPGGGDTSPR 22 3 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 KLEPGGFGEKPVRPGGGDT(0.165)S(0.835)PR;KLEPGGFGEKPVRPGGGDT(0.448)S(0.552)PR 114.91 2.0183e-15 49800000.0 5671.0 6345.2 6293.6 6156.700000000001 9079.6 7476.5 5746.3 7722.5 9812.599999999999 8388.4 8431.4 True False 6628.126157361632 6668.143577459525 7186.127116153953 7665.091776384764 7744.002867673387 8267.658267500961 6790.328328688018 8817.188024164376 7590.061767502287 6493.454614003183 6337.650685197984 1.0458333042624255 1.0521475399446407 1.1338786993952892 1.2094531802276685 1.2219043384262303 1.30453044482408 1.0714267267123594 1.3912391929011678 1.19761440705929 1.0245838618352838 1.0 12.629732428979795 -3.9394174087132705 15.905114701038665 1.1357776430810496 1.1469843960119839 0.0 0.1207687645295595 0.0 0.0 0.01715047204745508 0.0 0.00011496948640879766 3.9394174087132705 0.011206752930934316 KLEPGGFGEKPVRPGGGDTSPR ddPTM_A549_MK2206_60min_R1 2 KLEPGGFGEKPVRPGGGDTSPR 22 3 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 0 ; 72.167 9.6186e-05 16096100.0 3514.1 3541.6000000000004 3738.8999999999996 3352.2 5299.6 4391.9 3716.8 4225.2 5872.5 4701.1 5202.299999999999 False True 4107.194168503703 3721.8523126033297 4269.132241417946 4173.489150485975 4520.035860337668 4856.647942892724 4392.0944489615285 4824.135039132315 4542.388126455494 3639.118244944252 3910.425333824214 1.0503190363916393 0.9517768515895767 1.0917309184990711 1.0672724305426124 1.1558936623186418 1.2419743450626504 1.1231756328323153 1.2336599288585663 1.1616097326203771 0.9306195450062114 1.0 11.933109821510788 -5.881055454875453 6.1958619923563125 1.1084472269897403 1.0018682594607433 0.18514104963531064 0.08984890883893434 0.2642184454208017 13.185325251798888 0.012544674667614837 0.04001424846273777 1.3150569024212207e-06 5.881055454875453 -0.10657896752899698 KLEPGGFGEKPVRPGGGDTSPR ddPTM_A549_PD325901_60min_R1 2 KLEPGGFGEKPVRPGGGDTSPR 22 3 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 0 ; 55.733999999999995 0.0016035999999999997 10036100.0 3498.0 3742.0 3595.2999999999997 3785.7999999999997 4475.9 3861.8 3978.3 4369.0 4367.7 4058.2 4432.9 False True 3853.114384908504 4057.351472550142 3839.2986782952166 4019.640267824378 4161.52822501674 3830.3507811757113 4129.696383509291 4281.856867585806 4184.140758085891 3801.964559423255 3887.6814024683586 0.9911085775861398 1.043642997590815 0.9875548638984607 1.0339428187896869 1.0704396256273756 0.9852532614282006 1.0622517526480624 1.1013908868322333 1.0762560829777115 0.9779516801477919 1.0 11.92469427883411 -6.504136874227884 23.405101571008565 1.042294340141792 1.0110049888183525 0.10553013382959497 0.03934664839473598 601.9794809390263 751757.5802928886 0.005654404918062886 0.012922923366140555 3.13229837930539e-07 6.504136874227884 -0.03128935132343935 KLES(ph)LRR ddPTM_A549_MK2206_60min_R1 1 KLESLRR 7 2 Q8N4V1;Q8N4V1-2 Q8N4V1 MMGT1 Membrane magnesium transporter 1 1 KLES(1)LRR 56.431999999999995 0.0077277 8719900.0 1036.2 1821.9 1626.6 498.93 1928.2 1195.8 972.54 1717.6 1380.2 1543.5 1851.9 True False 1211.085227342289 1914.626928035917 1857.276339000893 621.167872397819 1644.564334271094 1322.338762292202 1149.2379292383348 1961.0750599293924 1067.5869037265006 1194.8222779926944 1392.0221201601332 0.8700186655101214 1.375428522512031 1.3342290414086513 0.44623419657035485 1.1814211214415968 0.9499409119591326 0.825588841293794 1.4087959031166812 0.766932427484478 0.858335697894834 1.0 10.442966421417529 KLES(ph)PPPSTNPFLEDEPTPEMEELATEKGDLDQPK ddPTM_A549_PD325901_60min_R1 1 KLESPPPSTNPFLEDEPTPEMEELATEKGDLDQPK 35 2 Q5VIR6-2;Q5VIR6-3;Q5VIR6-1;Q5VIR6;E7EVT8;F6VX93 Q5VIR6-2 VPS53 Vacuolar protein sorting-associated protein 53 homolog 1 KLES(0.959)PPPS(0.021)T(0.021)NPFLEDEPTPEMEELATEKGDLDQPK 89.266 1.6096e-09 2801400.0 675.89 639.38 737.34 797.68 952.15 668.79 570.88 815.16 794.8 919.44 523.93 True False 744.5058552360804 693.2627965043055 787.3803263856136 846.9508819372785 885.2742687391789 663.3435959766176 592.6051507975224 798.9009943193505 761.3973199914524 861.3864014873883 459.4899314659129 1.6202876369039902 1.5087660229955113 1.7135964739719767 1.8432414378161608 1.9266456305470812 1.4436520814729268 1.2897021462623377 1.7386692060272417 1.6570489750719084 1.874657837962419 1.0 8.843889438702869 -10.91085736397268 0.521927252594539 0.827090246966141 1.6582328672753326 0.0 0.31288140151503696 0.847407338793899 0.27902093498553443 0.36264538638854116 0.04215841667819291 1.2278424271845414e-11 10.91085736397268 0.8311426203091916 KLES(ph)TESR ddPTM_A549_MK2206_60min_R1 4 KLESTESR 8 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 KLES(0.912)T(0.083)ES(0.005)R;KLES(0.614)T(0.386)ESR;KLES(0.911)T(0.084)ES(0.005)R;KLES(0.499)T(0.499)ES(0.002)R 75.416 0.0023469999999999997 194616400.0 12182.0 12498.5 11715.099999999999 11312.2 17146.9 15072.5 14882.300000000001 16476.2 20508.4 22659.2 22647.800000000003 True False 14238.023778695006 13134.620264590223 13376.477338638473 14083.689507823954 14624.613724361081 16667.46194568425 17586.221270388545 18811.751806246313 15863.280145185165 17540.470982502142 17023.72621251833 0.8363635317528268 0.7715479032394055 0.785754961731124 0.8272976980484783 0.8590724229109682 0.9790724861063552 1.0330418294354726 1.1050313880408371 0.9318336037101069 1.0303543867854164 1.0 14.055259233256223 -7.100710261200079 2.4087126267524464 0.985103800289461 0.8011376008321074 0.8066347127852724 0.04751681925595028 0.11976542554229433 1.3620455072957451 0.008031527916917835 0.015299572586866232 7.930302227546947e-08 7.100710261200079 -0.1839661994573536 KLES(ph)TESR ddPTM_A549_PD325901_60min_R1 3 KLESTESR 8 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 KLES(0.712)T(0.243)ES(0.045)R;KLES(0.955)T(0.04)ES(0.006)R;KLES(0.951)T(0.049)ESR 93.84299999999999 0.0020495 73652000.0 13819.9 14321.199999999999 16168.199999999999 15216.300000000001 17731.0 15665.9 14204.6 14852.5 16195.699999999999 18440.6 18569.9 True False 15222.886074327329 15528.097784255773 17265.471279284822 16156.176292275362 16485.635728629284 15538.322104412593 14745.163826055365 14556.255235939158 15515.051051063867 17276.257368907518 16285.920024294977 0.9347268101291276 0.9534676432827435 1.0601471242354483 0.9920333802557015 1.0122630900824992 0.9540954444841229 0.9053933584383844 0.8937938547054423 0.9526665382071664 1.0608094196173858 1.0 13.991337602322616 -7.275679618187284 24.348492486023687 0.9626465178331961 0.9924201281797441 0.07412786744627053 0.05138909213549919 1191.55712740026 2037365.260337756 0.007262699510171733 0.011645865347341513 5.300543241563685e-08 7.275679618187284 0.02977361034654802 KLEST(ph)ESR ddPTM_A549_MK2206_60min_R1 2 KLESTESR 8 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 KLES(0.25)T(0.738)ES(0.012)R;KLES(0.302)T(0.584)ES(0.113)R 78.683 0.0026153 116937600.0 6266.7 7274.8 6365.5 5520.2 8265.4 6966.299999999999 7704.4 7413.5 9873.6 12055.7 11489.6 True False 7324.365753894923 7645.056246816892 7268.22361730615 6872.649247811194 7049.570609109171 7703.4692421443115 9104.189752631073 8464.386327891556 7637.245364899273 9332.30899695272 8636.41522317181 0.8480793899583924 0.8852117515499871 0.8415787603408931 0.7957756858854621 0.816261194829415 0.8919753211350501 1.0541630430417712 0.9800809837374777 0.8843073390459818 1.080576692504756 1.0 13.076216891849533 -7.526187688381383 24.976813012017757 0.9553583412810752 0.8395761462184607 0.6005556966058094 0.05855481317854156 63.447281420226844 478915.56724899064 0.008611523586320526 0.012809370707780337 2.9772294866517658e-08 7.526187688381383 -0.11578219506261456 KLEST(ph)ESR ddPTM_A549_PD325901_60min_R1 4 KLESTESR 8 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 KLES(0.345)T(0.654)ES(0.001)R;KLES(0.317)T(0.683)ESR;KLES(0.308)T(0.692)ESR;KLES(0.279)T(0.72)ES(0.001)R 121.36 0.00072993 401448000.0 19495.399999999998 20104.9 21491.1 20131.2 22331.2 20018.0 21212.0 21895.2 22690.7 24203.6 25983.0 True False 21474.55865624507 21799.21048115269 22949.615282482788 21374.658502727587 20762.733550457757 19854.980044946748 22019.234267651776 21458.483059547896 21737.088788034787 22675.380565387786 22787.255719807654 0.9423933676040889 0.9566404462738305 1.0071250160471936 0.9380093314241356 0.911155507523879 0.8713194905557651 0.9662960094186208 0.9416879032473958 0.9539142867975973 0.9950904507416125 1.0 14.47593957015457 -10.08561446099891 0.7098625451299347 0.9983742407060803 0.9418907324649661 0.30532573510290484 0.03177622849907889 0.6628025590513358 0.6563658974905826 0.018790685195863237 0.007225228946456822 8.210801235662674e-11 10.08561446099891 -0.056483508241114144 KLESTESR ddPTM_A549_MK2206_60min_R1 1 KLESTESR 8 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 61.65 0.010843 6520000.0 2831.2 2865.8 2721.2 2484.8 3020.5 2704.0 2558.9 1984.4 3507.6 4203.8 4267.6 False True 3309.0373438057195 3011.656979178514 3107.1070783777377 3093.5761115469127 2576.1884512321553 2990.1354852300656 3023.8190070618953 2265.6947769701255 2713.1342004862126 3254.158660334101 3207.837140231863 1.0315477997011224 0.9388434784943075 0.9685987606444245 0.9643806640767644 0.8030920332339403 0.9321344427772097 0.9426348267927758 0.706299814462015 0.8457830250977476 1.0144401096680644 1.0 11.647385183641935 -6.555152556814303 24.993476286353303 0.9023170218397846 0.9740662333330546 0.17586697742103907 0.08563519771476541 321.287396995799 248810.27110350897 0.013174385113190041 0.027424799120879986 2.785142645662262e-07 6.555152556814303 0.07174921149327007 KLESTESR ddPTM_A549_PD325901_60min_R1 2 KLESTESR 8 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 83.869 0.0033033999999999997 17944900.0 11624.7 10946.3 11132.0 10596.3 13243.599999999999 11318.6 10954.0 12559.6 12260.0 12527.1 12162.1 False True 12804.83098634816 11868.783117043185 11887.48446215402 11250.80938505665 12313.415223939695 11226.42507426987 11370.860464258802 12309.0889251844 11744.75483529844 11736.136768111735 10666.238801904045 1.200501059854609 1.1127430519298398 1.1144963733637736 1.054805690554036 1.1544289840708997 1.0525195697161613 1.066060930703049 1.1540233772927613 1.1011149340854687 1.1003069578769136 1.0 13.380763912932952 -14.999999997598527 0.18050274860274784 0.5283957560039181 1.1340392873070273 0.06463221809682296 0.051995003303483035 30.85789746407922 0.3433156998314488 5.125254948065082 0.04676204770301519 1.0000000055295955e-15 14.999999997598527 0.6056435313031092 KLET(ph)DISQMQGEMEDILQEAR ddPTM_A549_PD325901_60min_R1 1 KLETDISQMQGEMEDILQEAR 21 1 Q9UKX2 Q9UKX2 MYH2 Myosin-2 1 KLET(0.5)DIS(0.5)QMQGEMEDILQEAR 42.806000000000004 0.016366 16257000.0 2265.6 2268.6 2669.0 2212.0 2664.2 2198.7 2203.6 2592.7 2493.0 2343.2 2975.4 True False 2495.6020441534315 2459.7828836523913 2850.134390000818 2348.6302161835088 2477.0757829910413 2180.794516176663 2287.4592038561896 2540.986564566197 2388.22787964103 2195.2499521069867 2609.444662614622 0.9563728558446908 0.9426461188825243 1.0922379120870218 0.9000498266287121 0.9492731608682787 0.835731275478186 0.8766076692978007 0.9737652616170711 0.9152245739704876 0.8412709353672905 1.0 11.34952709232354 -4.794854717061815 13.069621447047982 0.950176604485407 3.9305665234777196 0.0 0.07222605904664689 2067716.949977269 415295.102582722 0.009087632348422735 184490413.47736207 1.6037818082009276e-05 4.794854717061815 2.9803899189923126 KLFAPQQILQCS(ph)PAN ddPTM_A549_MK2206_60min_R1 2 KLFAPQQILQCSPAN 15 1 K7ERV3;P04183 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 KLFAPQQILQCS(1)PAN;KLFAPQQILQCS(1)PAN 95.81 1.5005e-05 6022500.0 1992.92 2608.1000000000004 2591.4 2505.68 3452.0 2528.2 2693.6 2612.5 4010.0 2981.4 3309.3 True False 2329.2761737840115 2740.8411499042095 2958.899486589765 3119.5717124842486 2944.21537283675 2795.732445916664 3182.992253476853 2982.8298754457 3101.741402654158 2307.899669327774 2487.509477966375 0.9363888638077774 1.1018414901256746 1.1895027990039126 1.2540944025003702 1.1835996601885304 1.1239082587143634 1.2795900002274803 1.1991230191750935 1.2469264660611217 0.9277953269205478 1.0 11.280486307318991 -4.351471986033798 12.873999378233545 1.1408894339007578 1.1479521566441961 0.0 0.12051712581964297 1771984.3602853764 0.0871903883034616 0.015993677418990028 6716952.644380823 4.451721776209598e-05 4.351471986033798 0.007062722743438332 KLFAPQQILQCS(ph)PAN ddPTM_A549_PD325901_60min_R1 2 KLFAPQQILQCSPAN 15 1 K7ERV3;P04183 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 KLFAPQQILQCS(1)PAN;KLFAPQQILQCS(1)PAN 91.936 2.2756e-05 16488100.0 4292.5 4953.299999999999 5573.4 4643.6 5318.2 5409.299999999999 5657.4 5616.799999999999 5315.7 4389.7 5001.4 True False 4728.271440028515 5370.731974607864 5951.644439576826 4930.424625619227 4944.66797879399 5365.248454247696 5872.695452848065 5504.768517705639 5092.299614844694 4112.533592849111 4386.259506486777 1.0779734835651973 1.2244446473504735 1.3568837937598135 1.124061314276479 1.1273085806896264 1.2231944886783614 1.338884633743858 1.2550029266541833 1.1609663330028157 0.9375946832984102 1.0 12.098775454094081 -9.954887702583305 0.8101895682177044 1.0138187354905577 1.2166881944356196 0.5234641918538905 0.08624278608148855 0.3690664523830083 0.49367143988735845 0.036892539761268314 0.017586672182560423 1.1094616565110927e-10 9.954887702583305 0.20286945894506192 KLFIGGLSFETTDESLR ddPTM_A549_MK2206_60min_R1 2 KLFIGGLSFETTDESLR 17 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646;F8VZ49;Q32P51 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ; 120.9 8.3731e-10 4424000.0 2296.4700000000003 2244.34 2490.7 2509.73 3404.0 2916.2 2915.8 2109.8599999999997 4154.0 3694.2000000000003 3377.1 False True 2684.0579926990417 2358.5673196487905 2843.9187123752117 3124.613962666061 2903.2761092515343 3224.7903483831074 3445.5631172734666 2408.9391161752596 3213.1256325749027 2859.6776542666744 2538.47286678157 1.0573514603297902 0.9291284340726973 1.1203266143163093 1.230903037631297 1.1437097269164371 1.2703662861961935 1.357336988849505 0.9489717805136357 1.2657711156269709 1.1265346546297135 1.0 11.309745124139164 -5.8845770934117505 6.217686000653858 1.1500662001427022 0.9948802458606686 0.23665555278003825 0.11649235866816207 0.26407861249785153 13.268057083025084 0.018199687774434956 0.05801370787322605 1.3044363921812454e-06 5.8845770934117505 -0.15518595428203363 KLFIGGLSFETTDESLR ddPTM_A549_PD325901_60min_R1 2 KLFIGGLSFETTDESLR 17 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646;F8VZ49;Q32P51 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ; 151.95 5.969600000000001e-17 6039700.0 3117.9 3603.7 3685.2 3764.5 4392.5 4014.5 3752.6 3861.1000000000004 4263.1 4056.2 3501.8999999999996 False True 3434.4269127233315 3907.396446186248 3935.299832907836 3997.024615200187 4083.985953302362 3981.8072430032344 3895.4072465015115 3784.0873315256486 4083.93673232959 3800.090839764577 3071.1885003731068 1.118272913663911 1.272275031542855 1.2813605652761957 1.30145857693678 1.3297737839296462 1.2965036963766634 1.268371266051652 1.2321247396784452 1.3297577572439623 1.2373355915154407 1.0 11.58458134800408 -10.80848987543149 0.9012389775204659 0.9885204167617618 1.2762324593595025 0.1346995244381597 0.0882756396877705 0.23863148962442268 0.32103131180269895 0.04752633861972517 0.010087087535285314 1.5542115231859506e-11 10.80848987543149 0.28771204259774064 KLFT(ph)STGLK ddPTM_A549_PD325901_60min_R1 2 KLFTSTGLK 9 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 KLFT(0.965)S(0.028)T(0.007)GLK;KLFT(0.951)S(0.046)T(0.003)GLK 55.261 0.01114 5583400.0 9285.599999999999 9492.1 9921.5 10540.3 10875.7 10811.6 10192.7 11649.6 11036.9 11008.2 11671.4 True False 10228.267276302575 10292.032579527846 10594.83265282619 11191.35039224187 10111.828351128166 10723.553914174558 10580.588776159453 11417.239589065597 10573.05747485362 10313.140373328833 10235.891791100454 0.9992551196365218 1.0054846992888498 1.0350668870921258 1.0933439528905664 0.9878795670661393 1.0476423679564588 1.033675325227519 1.1154122984176387 1.0329395513975943 1.007546834589981 1.0 13.32134918064555 -5.700213184570534 5.859602099742728 1.0301572216703376 1.0014166087844438 0.09113120728371615 0.03671961538758246 0.4268904432026956 28.288894117280694 0.005261512400009906 0.020832199287902683 1.994283129703341e-06 5.700213184570534 -0.0287406128858938 KLFVGGIKEDTEEHHLR ddPTM_A549_MK2206_60min_R1 4 KLFVGGIKEDTEEHHLR 17 2 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;; 145.55 5.5203999999999997e-17 23091300.0 3265.5200000000004 3141.7999999999997 3473.5599999999995 3308.6 4970.3 3834.7 3395.68 3571.18 4982.1 4307.56 3721.9700000000003 False True 3816.659941701207 3301.7042002871967 3966.16303953027 4119.207148528696 4239.175454116599 4240.485408732149 4012.6311016061345 4077.4057012800686 3853.66230477887 3334.479204269654 2797.702127853779 1.3642124026366982 1.1801485824439988 1.417650220887833 1.4723537246935907 1.5152347392210148 1.5157029644128635 1.434259588130053 1.457412374493205 1.3774383864572306 1.1918635551196641 1.0 11.450026651187427 -10.370808007492704 0.7093445605625543 0.9935475831005717 1.4205721834936686 0.5698463314205444 0.10270164586820031 0.3025785161327695 0.2734987285672336 0.07047069143555013 0.020343972395231308 4.257866028852241e-11 10.370808007492704 0.427024600393097 KLFVGGIKEDTEEHHLR ddPTM_A549_PD325901_60min_R1 3 KLFVGGIKEDTEEHHLR 17 2 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;; 118.47 2.6076999999999997e-10 14460600.0 2568.11 2719.41 2548.62 2938.58 3088.0200000000004 2953.1800000000003 2571.7799999999997 2468.16 2718.39 3329.3 3396.2999999999997 False True 2828.8226366573413 2948.584224470225 2721.584679297069 3120.0894126006006 2871.128128290668 2929.1302812037075 2669.650495232016 2418.9306125659364 2604.1455217558673 3119.0874298181093 2978.576630919551 0.9497229674376457 0.989930624534556 0.9137198791682111 1.0475102034347734 0.9639262251931012 0.9833993360444185 0.8962839725254399 0.812109578600689 0.8742919335105074 1.0471738069250813 1.0 11.540407360958762 -7.746747482566263 24.731739227883523 0.9244214774235198 0.9754415833101323 0.12137449139470335 0.06520573591504632 362.94689823609326 610968.2258003512 0.010321359342076734 0.015271133528498283 1.7916472917965238e-08 7.746747482566263 0.05102010588661254 KLGAGEGGEASVS(ph)PEK ddPTM_A549_MK2206_60min_R1 5 KLGAGEGGEASVSPEK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.205)VS(0.795)PEK;KLGAGEGGEAS(0.009)VS(0.991)PEK;KLGAGEGGEAS(0.086)VS(0.914)PEK;KLGAGEGGEAS(0.004)VS(0.996)PEK;KLGAGEGGEAS(0.026)VS(0.974)PEK 171.42 2.2017e-28 583004100.0 21898.68 22360.579999999998 21295.609999999997 20979.67 31173.14 24373.31 22373.510000000002 23767.02 31579.0 29252.6 30525.899999999998 True False 25594.641812677124 23498.63801224072 24315.64771768767 26119.690091813165 26587.612400808845 26952.477486506225 26438.487159595683 27136.0678684461 24426.40692130066 22644.417343186953 22945.476558019458 1.1154547933645675 1.0241076472228654 1.0597142167086233 1.138337224148187 1.1587300151984186 1.1746314101759772 1.152230902362994 1.1826325681155674 1.064541277211504 0.9868793653480566 1.0 14.485922150158935 -9.255748769339924 1.6961464551685208 1.0199396370213174 1.1233482983611547 0.5030924384813656 0.048258363610021476 0.22879515500439634 1.3596242447218947 0.011484536957898943 0.010281217152211827 5.549466456428694e-10 9.255748769339924 0.10340866133983728 KLGAGEGGEASVS(ph)PEK ddPTM_A549_PD325901_60min_R1 3 KLGAGEGGEASVSPEK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.001)VS(0.999)PEK;KLGAGEGGEAS(0.002)VS(0.998)PEK;KLGAGEGGEAS(0.004)VS(0.996)PEK 188.26 1.1751e-34 495913000.0 29829.699999999997 29863.6 32579.8 31265.2 37532.6 31462.2 32821.6 35419.4 35214.1 37885.1 38742.0 True False 32857.98918453551 32380.310378313312 34790.86114625274 33196.38039557895 34896.439656440794 31205.982274459166 34070.64394866869 34712.93228101824 33734.1738373314 35493.028320488374 33976.97960577256 0.9670662185332406 0.9530073230173767 1.0239539108515079 0.9770256444436576 1.0270612650487632 0.9184448599179601 1.0027567000946787 1.021660332489373 0.9928538153991796 1.0446198788799415 1.0 15.052269988944781 KLGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A549_MK2206_60min_R1 4 KLGAGEGGEASVSPEKTSTTSK 22 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.006)VS(0.994)PEKTSTTSK;KLGAGEGGEASVS(1)PEKTSTTSK;KLGAGEGGEAS(0.169)VS(0.831)PEKTSTTSK;KLGAGEGGEAS(0.048)VS(0.946)PEKT(0.002)S(0.002)T(0.002)TSK 178.02 2.3887e-41 466422000.0 10411.3 10785.5 11172.7 9859.07 12869.5 9158.99 9620.6 8517.55 12758.8 16578.0 16966.3 True False 12168.472908153608 11334.435881404792 12757.156862630798 12274.542592590475 10976.413598123569 10128.18824255449 11368.538488936516 9724.93879640288 9868.952171616917 12833.018286078968 12753.099463941291 0.954158080752002 0.8887593101153414 1.0003181500074534 0.9624752498242556 0.8606859555325193 0.7941746452453697 0.8914333743793383 0.7625549243068028 0.7738473458566565 1.0062666195275622 1.0 13.638560296267746 -6.762092034132847 24.995734988915597 0.8712300334127351 0.9504435674194569 0.19690324238679968 0.07921095019315698 28.239540070849987 1081608.064676509 0.013745581484415573 0.027136146033184604 1.729449821559998e-07 6.762092034132847 0.07921353400672182 KLGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A549_PD325901_60min_R1 6 KLGAGEGGEASVSPEKTSTTSK 22 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.487)VS(0.513)PEKTSTTSK;KLGAGEGGEAS(0.012)VS(0.987)PEKT(0.001)STTSK;KLGAGEGGEAS(0.009)VS(0.983)PEKT(0.007)STTSK;KLGAGEGGEAS(0.006)VS(0.992)PEKT(0.001)STTSK;KLGAGEGGEAS(0.018)VS(0.981)PEKT(0.001)STTSK;KLGAGEGGEAS(0.043)VS(0.956)PEKTSTTSK 167.06 1.0205e-34 741085000.0 22421.0 19624.789999999997 20268.67 19234.65 25190.600000000002 21786.77 21678.899999999998 21957.0 26185.7 21305.79 23791.0 True False 24697.163414532162 21278.6399265065 21644.223831614036 20422.730645440362 23421.29915885222 21609.345768500574 22503.902402649266 21519.050410066728 25085.206092224686 19960.53878333112 20864.85782357478 1.1836727392710693 1.0198315323512148 1.0373530466696335 0.9788099597000433 1.1225237841011775 1.0356814290910055 1.0785552718802887 1.0313538003481044 1.202270645903056 0.9566582697140698 1.0 14.348787469433171 KLGDMRNS(ph)ATFK ddPTM_A549_PD325901_60min_R1 1 KLGDMRNSATFK 12 2 O43399-2;O43399;O43399-6 O43399-2 TPD52L2 Tumor protein D54 1 KLGDMRNS(0.995)AT(0.005)FK 46.408 0.014694 8131300.0 2811.1 2125.8 2125.4 2646.9 3679.4 3718.9 2795.3 2693.7 3529.3 2816.6 2791.4 True False 3096.480802577556 2304.948626495749 2269.642425068466 2810.393001453947 3420.971637240913 3688.6145113973635 2901.676671146853 2639.972040333228 3380.9757944713547 2638.7593953160367 2448.0754961425205 1.264863280342759 0.9415349445422336 0.9271129214130793 1.1480009525369366 1.397412638062594 1.5067405058420724 1.18528888333676 1.0783866937490623 1.3810749708490702 1.0778913474988743 1.0 11.257432334617057 -4.9241162698342995 20.63656586451701 1.179729136538042 4.401459629289636 0.018124222230440745 0.18325230863365363 2684.418983815795 755904.1204953031 0.028015396706404665 14180.755083346068 1.190923129989824e-05 4.9241162698342995 3.221730492751594 KLGDVS(ph)PTQIDVSQFGSFK ddPTM_A549_MK2206_60min_R1 3 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.858)PT(0.142)QIDVSQFGSFK;KLGDVS(0.912)PT(0.088)QIDVSQFGSFK;KLGDVS(0.867)PT(0.133)QIDVSQFGSFK 137.52 2.1202e-17 397543000.0 8341.1 7970.1 8801.800000000001 8515.5 10886.5 10074.900000000001 8372.1 9484.1 13444.7 11907.600000000002 12285.7 True False 9748.873759684198 8375.744046950476 10050.027591674698 10601.79788227532 9285.110271259344 11141.01923082264 9893.20219978229 10828.50021883811 10399.49691677415 9217.664889812635 9234.821621929568 1.0556645443517751 0.9069741019210297 1.088275226433101 1.148024110947595 1.00544554636663 1.206414123296816 1.071293264213062 1.172572753665766 1.1261177900912425 0.9981421696249994 1.0 13.172868379313979 -5.790410562255052 24.729116907825897 1.0824991042251422 0.9813192913480482 0.23801556794901302 0.07430717909582574 183.5543333643472 156677.6253044987 0.01042445935796217 0.03241908829716644 1.620277636313089e-06 5.790410562255052 -0.10117981287709399 KLGDVS(ph)PTQIDVSQFGSFK ddPTM_A549_PD325901_60min_R1 3 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.783)PT(0.217)QIDVSQFGSFK;KLGDVS(0.91)PT(0.09)QIDVSQFGSFK;KLGDVS(0.949)PT(0.051)QIDVSQFGSFK 251.52 1.8901999999999996e-97 1670613000.0 124964.6 127136.0 126680.3 124391.0 149710.0 111923.0 127842.0 132521.0 128621.0 138212.0 145593.0 True False 137650.9141979238 137850.19690383074 135277.5869485279 132074.34955754178 139194.886071462 111011.53619595239 132707.09726782684 129877.76469428677 123215.50666157583 129485.27073259243 127685.98399006856 1.0780424749566115 1.079603199945209 1.05945525672614 1.034368420325715 1.090134419783213 0.8694105079269067 1.0393239188895536 1.0171653977651038 0.964988503915665 1.0140914976436552 1.0 16.96224064444382 KLGDVS(ph)PTQIDVSQFGSFKEDTK ddPTM_A549_MK2206_60min_R1 7 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.964)PT(0.036)QIDVSQFGSFKEDTK;KLGDVS(0.971)PT(0.029)QIDVSQFGSFKEDTK;KLGDVS(0.826)PT(0.174)QIDVSQFGSFKEDTK;KLGDVS(0.997)PT(0.003)QIDVSQFGSFKEDTK;KLGDVS(0.995)PT(0.005)QIDVSQFGSFKEDTK;KLGDVS(0.993)PT(0.007)QIDVSQFGSFKEDTK;KLGDVS(0.867)PT(0.133)QIDVSQFGSFKEDTK 289.76 5.919399999999998e-157 2402860800.0 29655.800000000003 33528.2 34147.700000000004 28816.800000000003 45312.3 32133.7 30112.3 30397.1 50318.3 46116.100000000006 47355.3 True False 34660.97402530151 35234.64216947902 38990.35733511668 35876.9172936353 38646.92069484084 35534.06680537625 35583.315130075396 34705.98201221453 38921.28539181361 35698.440980977575 35595.67207020853 0.9737412446360493 0.9898574776164524 1.0953679216454322 1.0079011072714694 1.0857196520580945 0.9982693046303278 0.9996528527370192 0.9750056676486067 1.0934274626152773 1.0028871181464518 1.0 15.11941422011146 -8.753350896133815 24.9949335387565 1.0441185248798943 1.0184438094073958 0.0042473343597870805 0.04481764791950074 460.3684991330686 1422625.2975671713 0.008389926749298903 0.009436564860023 1.7646114945655177e-09 8.753350896133815 -0.025674715472498555 KLGDVS(ph)PTQIDVSQFGSFKEDTK ddPTM_A549_PD325901_60min_R1 6 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.971)PT(0.029)QIDVSQFGSFKEDTK;KLGDVS(0.5)PT(0.5)QIDVSQFGSFKEDTK;KLGDVS(0.965)PT(0.035)QIDVSQFGSFKEDTK;KLGDVS(0.828)PT(0.165)QIDVS(0.007)QFGSFKEDTK;KLGDVS(0.5)PT(0.5)QIDVSQFGSFKEDTK;KLGDVS(0.61)PT(0.39)QIDVSQFGSFKEDTK 308.75 7.074799999999998e-176 2910343000.0 60875.799999999996 59405.9 64937.8 65821.6 74438.59999999999 74393.79999999999 71404.0 76918.4 68934.9 71596.0 79991.5 True False 67055.8664016046 64412.2436780242 69344.8696107137 69887.25074030038 69210.28953522898 73787.96155798572 74121.31829376808 75384.20217068239 66037.80588057217 67075.41634135021 70153.05260789728 0.9558510130185836 0.9181673681121209 0.9884797173160701 0.9962111147310648 0.9865613392771712 1.0518139812162537 1.056565830542691 1.0745676683810652 0.9413390212636044 0.9561296885575495 1.0 16.098218261533717 -5.812100281283911 8.261803031845908 0.9929321091328526 0.9371230546808674 0.24746033767876552 0.04158839233906992 0.30813280599744103 45.15040569154282 0.006685700740945835 0.021072133242095566 1.5413445058694852e-06 5.812100281283911 -0.05580905445198514 KLGDVSPT(ph)QIDVSQFGSFK ddPTM_A549_MK2206_60min_R1 1 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.484)PT(0.516)QIDVSQFGSFK 150.36 2.8116e-21 430080000.0 5469.3 5835.4 5897.1 5662.8 7302.2 6812.5 5734.7 7303.7 9527.7 7934.8 8555.2 True False 6392.384128453174 6132.3969349913805 6733.397454028132 7050.186254212748 6228.056053165846 7533.394228228491 6776.620758840849 8339.021841643165 7369.691162610473 6142.323169042067 6430.707728491807 0.9940405315158646 0.9536115143005591 1.0470694266192868 1.0963313140443762 0.9684868782905347 1.1714720286308669 1.053790818204417 1.2967502479853668 1.1460155668338678 0.9551550822047118 1.0 12.650761806072001 -5.936065980457343 3.656266996391118 1.0869278696787708 0.9742085913172268 0.17423241195053984 0.09331331732250372 0.2936978739456288 7.9134006025923584 0.01298436637588657 0.04459871173408854 1.1586013215621597e-06 5.936065980457343 -0.11271927836154394 KLGDVSPT(ph)QIDVSQFGSFKEDTK ddPTM_A549_MK2206_60min_R1 1 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.391)PT(0.609)QIDVSQFGSFKEDTK 209.83 5.2524999999999994e-73 103790000.0 3055.2 2999.8 3683.3 2898.6 4838.4 3346.9 2718.0 2472.7 4452.2 4482.0 4769.2 True False 3570.8430675315185 3152.4770068182374 4205.6473253670165 3608.757130123099 4126.677769389723 3701.0667365075856 3211.8254176381356 2823.2127973261563 3443.783808702453 3469.5130871158117 3584.8760167761275 0.9960855133681223 0.8793824366771976 1.1731639548162527 1.0066616288081416 1.1511354228369763 1.0324113635137508 0.8959376565905686 0.7875342924314204 0.9606423744047476 0.96781954825761 1.0 11.80770750872865 -7.6239063479846205 8.85073879594219 0.9575590641723929 1.043027516250256 0.25165505523022214 0.09222308983588404 0.39704010786925387 31.55646396582802 0.014696424495325594 0.021807197540113895 2.3773528878541355e-08 7.6239063479846205 0.08546845207786313 KLGDVSPTQIDVS(ph)QFGSFKEDTK ddPTM_A549_PD325901_60min_R1 1 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.198)PT(0.198)QIDVS(0.494)QFGS(0.086)FKEDT(0.024)K 81.839 9.8164e-06 10954000.0 2036.3 2409.4 2063.1 2334.0 2536.1 2574.4 2409.3 2777.1 2402.7 2167.3 2444.2 True False 2243.0236769551684 2612.448593790034 2203.1143724281314 2478.1658791014056 2357.973085070033 2553.4349399396 2500.9872299195467 2721.7085619071945 2301.7228746143205 2030.456308126269 2143.5788950603796 1.0463919392581944 1.2187321865363148 1.0277738680414068 1.15608801934561 1.1000169345311708 1.191201754142889 1.1667343971723045 1.2697030037844865 1.0737756748391043 0.9472272342320649 1.0 11.065805801615301 -9.11225624221434 3.043161866608317 1.0280360733434577 1.1470088077175942 0.417855349774202 0.07277111033947252 0.17509466566259813 3.378263835500063 0.012707631359726695 0.012371960415343027 7.722248229484569e-10 9.11225624221434 0.11897273437413647 KLGDVSPTQIDVSQFGSFK ddPTM_A549_MK2206_60min_R1 2 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 ; 171.79 3.993e-34 13627900.0 4954.42 4327.83 5107.4800000000005 3950.7999999999997 6325.0 4974.200000000001 5261.11 5233.6 7367.4 6363.2 7274.200000000001 False True 5790.604972060586 4548.0980613434795 5831.797464601181 4918.746177358154 5394.600878676838 5500.566542393271 6216.985586089103 5975.4788272278 5698.695663320255 4925.7487005656685 5467.815382293237 1.0590344712099569 0.8317943718567867 1.0665681002117682 0.8995816122992798 0.9866099166673596 1.00598980722833 1.1370145389732706 1.0928457545546546 1.0422253249030118 0.9008622925560039 1.0 12.416748816642913 -7.275399820965177 3.3604962219721957 1.0359517862140515 0.961329626673847 0.12195104154766667 0.08259661094874814 0.3124154100441085 7.420287417023981 0.010418435475188895 0.017857513564873292 5.30395925346453e-08 7.275399820965177 -0.07462215954020446 KLGDVSPTQIDVSQFGSFK ddPTM_A549_PD325901_60min_R1 1 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 162.76 7.9983e-27 5744600.0 2094.5 2300.7 2383.8 2477.8 3106.1 2481.2 2598.2 2449.9 3021.9 2606.0 2996.9 False True 2307.132098110595 2494.5880633073516 2545.5790029538953 2630.8480785079096 2887.938251463281 2460.993929839238 2697.075922789593 2401.034822590629 2894.900051940325 2441.4567152572577 2628.3002989143492 0.8778038411606099 0.9491259672031278 0.9685266953724341 1.0009693639629431 1.0987854974776583 0.9363442719447929 1.026167338604212 0.9135313889293416 1.1014342817432612 0.9289108692281968 1.0 11.35991440621406 -3.3755955712539207 0.4659003340950588 1.0357533805565693 6.724749399556974e-09 0.1180433615272588 0.06472345496912438 17.284873116656613 0.6272822439285006 0.011992805516833857 14.54723471848027 0.00042111860479864216 3.3755955712539207 -1.0357533738318199 KLGDVSPTQIDVSQFGSFKEDTK ddPTM_A549_MK2206_60min_R1 2 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 ; 274.97 4.636699999999998e-127 33039000.0 7366.900000000001 8667.2 8649.2 6992.9 11555.7 8720.5 8044.1 6933.7 13103.0 11096.8 11845.2 False True 8610.252616587439 9108.323459395633 9875.786617045685 8706.160813923208 9855.87183774323 9643.297521800587 9505.60884548305 7916.573208565686 10135.191421191372 8590.025172937689 8903.709929111088 0.9670410070790629 1.0229807048874708 1.1091765899466635 0.9778127188822736 1.1069399066471164 1.083065104161961 1.0676009125593844 0.8891319766249445 1.1383110525707827 0.9647692075920181 1.0 13.120190877044376 -5.399812314354916 3.783373556619388 1.0555111149121197 0.968035321411695 0.023319736481923314 0.07291824461418511 0.40545567994119286 9.241017157198364 0.009815494184600248 0.07360474683793225 3.982792545930622e-06 5.399812314354916 -0.08747579350042467 KLGDVSPTQIDVSQFGSFKEDTK ddPTM_A549_PD325901_60min_R1 2 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 ; 228.48 3.1436e-88 25321000.0 8713.5 9329.7 9837.3 10963.5 10504.400000000001 11572.5 9912.0 11930.9 13080.3 11098.7 12806.1 False True 9598.088105460332 10115.946561584999 10504.918334490458 11640.690495084942 9766.60718221271 11478.25739685015 10289.206584054526 11692.928839890012 12530.580478968535 10397.926187884013 11231.030884556389 0.8546043728415448 0.900713983032072 0.9353476490689384 1.036475690855046 0.8696091465337004 1.0220128067347511 0.9161408858916994 1.0411269419594218 1.1157106242312214 0.9258211730306998 1.0 13.455202736831907 -8.316218634810792 5.813087835918691 1.0555718726987662 0.9372776482264721 0.21109803251734294 0.06999517758640006 0.15452601190677723 11.757953631581755 0.010551533817673358 0.012837314615002513 4.8281567924083926e-09 8.316218634810792 -0.1182942244722941 KLGILGS(ph)HEDLSK ddPTM_A549_MK2206_60min_R1 2 KLGILGSHEDLSK 13 1 E9PJN4;Q9Y210-2;Q9Y210-3;Q9Y210 E9PJN4 TRPC6 Short transient receptor potential channel 6 1 KLGILGS(1)HEDLSK;KLGILGS(1)HEDLSK 68.257 0.00086857 6742200.0 2410.75 2788.5 2849.9 2575.6 4039.5 3163.1 3324.0 2701.0 4132.0 3353.3999999999996 3393.7 True False 2817.625662821291 2930.4227393535084 3254.0586736251344 3206.6221156230768 3445.2949010932944 3497.817142504153 3927.9277734470825 3083.875021465584 3196.1085974481243 2595.864610962551 2550.9506286448764 1.1045394729250713 1.148757136436708 1.2756258929847517 1.257030253590799 1.3505925447579181 1.3711818265813611 1.5397898059413593 1.2089120764770775 1.2529088417308847 1.0176067626763652 1.0 11.316819261807698 -10.28540880902737 0.7654078469160324 1.0055291515012237 1.2859904060835585 0.46532257301812896 0.11123958980288057 0.4641632626858514 0.5124652943623547 0.07086878933336915 0.023968975462862422 5.183119131125531e-11 10.28540880902737 0.28046125458233484 KLGILGS(ph)HEDLSK ddPTM_A549_PD325901_60min_R1 2 KLGILGSHEDLSK 13 1 E9PJN4;Q9Y210-2;Q9Y210-3;Q9Y210 E9PJN4 TRPC6 Short transient receptor potential channel 6 1 KLGILGS(1)HEDLSK;KLGILGS(1)HEDLSK 83.96600000000001 9.1045e-05 9844800.0 4979.4 4966.5 5443.2 5833.9 5898.700000000001 6395.700000000001 5825.299999999999 5910.7 6338.799999999999 5887.3 6087.1 True False 5484.905022359461 5385.044384933268 5812.608284620623 6194.246753251795 5484.395661410273 6343.615539687576 6046.984979226473 5792.806451645554 6072.402279770781 5515.574873267096 5338.4252893061275 1.0274387530245597 1.0087327429158794 1.0888245071565155 1.160313466531046 1.027343338942394 1.1882934003768928 1.1327282206870488 1.0851152048993995 1.1374894188244888 1.0331838649715361 1.0 12.382198528008638 -5.76446434303786 24.848852667803367 1.0852742957793875 1.01808573764046 0.2023243776318907 0.0562064457809568 101.93185990703475 837367.5602040504 0.009127172623684128 0.030287094228479035 1.7200285552714948e-06 5.76446434303786 -0.06718855813892755 KLGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_A549_MK2206_60min_R1 1 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPT(0.001)FPT(0.032)S(0.032)ECT(0.468)S(0.468)DVEPDTR 72.22800000000001 7.6057e-05 4695900.0 881.0 897.6 668.68 911.04 1558.5 1302.5 823.6 852.58 1516.2 1343.2 1589.1 True False 1029.6912616179857 943.2840060404188 763.5088788658036 1134.2448408981397 1329.246714532466 1440.3296854704747 973.2374591489222 973.4358259167446 1172.783120873873 1039.7701871070858 1194.4826130711524 0.8620395561644307 0.7897009095972749 0.6391963101938624 0.9495699882829316 1.1128221541164334 1.205818878993325 0.8147774178534224 0.8149434870499529 0.9818335637875151 0.8704774567071486 1.0 10.222170138691924 -6.414640750737737 6.739130738775764 0.9890867763207981 0.7675776385743902 0.3551510166734324 0.12182203750276831 0.18762347372057483 10.240852395257297 0.01673568414960053 0.03910220941699837 3.84910048752369e-07 6.414640750737737 -0.2215091377464079 KLGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_A549_PD325901_60min_R1 3 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPTFPTS(0.003)ECT(0.498)S(0.498)DVEPDTR;KLGPGRPLPTFPTSECT(0.595)S(0.405)DVEPDTR;KLGPGRPLPTFPT(0.016)S(0.094)ECT(0.445)S(0.445)DVEPDTR 162.91 3.922e-41 117585200.0 5727.0 5857.1 7295.2 6984.3 7155.8 6905.9 7476.5 7839.9 6553.099999999999 7294.999999999999 8615.9 True False 6308.40082400543 6350.698372494235 7790.296141601332 7415.704348503832 6653.201294169842 6849.660640043848 7761.022298797783 7683.527044217432 6277.695996019109 6834.39245502751 7556.198920690094 0.8348643134224548 0.8404620417158415 1.0309808176529394 0.9814067133937454 0.880495784190157 0.9064955425258021 1.027106668347077 1.0168508167749122 0.8308007851447322 0.9044749253905741 1.0 12.883444966551899 -5.632236209070509 12.580555631145245 0.9382734752571278 0.8362877458085879 0.30432487089140703 0.06422568287562803 0.5281171118952849 56.65735318737691 0.010641577874366117 0.041234973974547964 2.332189259388116e-06 5.632236209070509 -0.1019857294485399 KLGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_A549_MK2206_60min_R1 2 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPTFPTSECT(0.258)S(0.742)DVEPDTR;KLGPGRPLPTFPTSECT(0.163)S(0.837)DVEPDTR 143.12 1.1253999999999999e-32 79071000.0 4247.5 4861.3 4778.7 3970.8 6204.1 5803.1 4864.7 4925.8 7390.4 7189.0 7546.400000000001 True False 4964.374158595226 5108.71940570888 5456.391516773369 4943.646178255986 5291.485108521575 6417.180190213979 5748.553020303252 5624.047234629833 5716.486200043706 5564.999907022659 5672.420609955414 0.8751773713469824 0.9006242232359838 0.9619158895229135 0.8715232029126352 0.9328442780203435 1.1312948442066284 1.0134215030201077 0.9914721811635965 1.0077683925643586 0.9810626343991089 1.0 12.469748797034777 -7.019023799934915 24.71385007288915 1.0123485915713526 0.9059143410637556 0.6228532249141296 0.04372344304269939 337.48942202739016 438433.33474002325 0.006073761210184935 0.010637541588483117 9.571416171805521e-08 7.019023799934915 -0.10643425050759703 KLGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_A549_PD325901_60min_R1 1 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPTFPTSECT(0.041)S(0.959)DVEPDTR 103.95 1.6135e-12 97618000.0 2542.9 2800.2 3470.1 2862.3 3216.7 3098.4 2548.3 2953.6 3070.1 3457.8 3274.4 True False 2801.0533360159625 3036.182681302753 3705.6018534064565 3039.0977702450496 2990.770089012568 3073.1676576712475 2645.2769509832665 2894.688130945625 2941.0743735603382 3239.473917888161 2871.6695581317845 0.9754093496182887 1.0572883195091554 1.290399810421503 1.058303439418771 1.0414743160624185 1.0701675786369207 0.9211634198971689 1.008015745665673 1.024168802859653 1.1280803213290522 1.0 11.487674033031997 -6.988361792371607 1.8508790726952185 1.0070376977303603 1.1062984754710101 0.11578348031983399 0.08577494568304042 0.3740413727103769 2.5572482291006335 0.011590377824923493 0.024416605775185077 1.0271602578263648e-07 6.988361792371607 0.09926077774064979 KLGSTLT(ph)PK ddPTM_A549_MK2206_60min_R1 2 KLGSTLTPK 9 1 E5RFM9;R4GMT7;O75410-7;H0YAY0;E7EVI4;E7ET87;O75410-3;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 KLGS(0.02)T(0.127)LT(0.853)PK;KLGS(0.001)T(0.018)LT(0.98)PK 55.04 0.011426 21529000.0 6673.8 7032.1 6387.2 6926.6 9103.1 6972.9 6572.4 6791.4 10084.2 9555.9 9129.1 True False 7800.174281255519 7390.003853472411 7293.001003606603 8623.61731094689 7764.0460488036515 7710.767649763585 7766.520005476409 7754.101747790215 7800.144801158367 7397.215553139223 6862.09251965758 1.1367049131020388 1.0769315383467277 1.062795493169848 1.2567037366871892 1.131440012876871 1.1236758507226239 1.1318005379886602 1.1299908483567265 1.1367006170222251 1.0779824859470628 1.0 12.744432862139023 -10.658690616778532 0.712312946578635 0.9902468060620007 1.132847368496395 0.2846896472835012 0.05141037393181167 0.5317852532863417 0.42941063719091926 0.04481109420152265 0.009235638975314483 2.1943676048901173e-11 10.658690616778532 0.14260056243439423 KLGSTLT(ph)PK ddPTM_A549_PD325901_60min_R1 2 KLGSTLTPK 9 1 E5RFM9;R4GMT7;O75410-7;H0YAY0;E7EVI4;E7ET87;O75410-3;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 KLGS(0.038)T(0.168)LT(0.795)PK;KLGS(0.014)T(0.036)LT(0.949)PK 73.273 0.0014029000000000001 46082000.0 8014.200000000001 7389.6 10409.7 7694.1 8930.3 9247.0 9633.9 8981.8 9761.400000000001 9157.5 9479.5 True False 8827.795684257779 8012.34752580346 11116.164840611284 8169.347082431066 8303.066535862506 9171.695497833081 10000.523336372358 8802.65095291421 9351.16230418289 8579.29388717127 8313.581595501546 1.0618522934849732 0.9637660295700853 1.3371090080629278 0.9826507370603634 0.9987351949916834 1.1032183172167167 1.202913957298935 1.0588277569414002 1.1248055001039234 1.0319612297801348 1.0 13.021254426744598 -10.881947819888936 1.0916055331500387 0.9991732294718179 1.0949676400686275 0.07545084011585201 0.10160130769044311 0.9555179458460196 1.9926273155382122 0.07060717570745012 0.01639005174354799 1.3123575681880223e-11 10.881947819888936 0.0957944105968096 KLGVSVS(ph)PSR ddPTM_A549_MK2206_60min_R1 3 KLGVSVSPSR 10 1 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 KLGVS(0.049)VS(0.761)PS(0.19)R;KLGVS(0.196)VS(0.688)PS(0.117)R;KLGVS(0.018)VS(0.948)PS(0.034)R 62.162 0.002997 71359600.0 9120.4 9542.6 9770.5 8973.9 11796.8 9271.3 9180.2 8893.4 13472.2 12649.400000000001 13273.400000000001 True False 10659.700547628458 10028.277580259923 11156.10381790743 11172.505902853685 10061.506347126466 10252.382812209142 10848.12350956645 10154.066684895239 10420.76821068263 9791.891754610157 9977.248452796326 1.0684008319589215 1.0051145491369713 1.118154355951786 1.11979830468413 1.0084450031217298 1.0275761760082964 1.0872860950481837 1.017722143829079 1.0444531134996442 0.9814220624991834 1.0 13.284426285511833 -10.680672681162324 0.23024643371393005 0.9665086899985811 1.0708459957104544 0.3214692519176652 0.03791042188015703 6.431428279611067 0.48043996170821346 0.19477797605091662 0.036634899545520724 2.0860625132726983e-11 10.680672681162324 0.10433730571187327 KLGVSVS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 KLGVSVSPSR 10 1 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 KLGVS(0.001)VS(0.999)PS(0.001)R;KLGVS(0.002)VS(0.813)PS(0.186)R;KLGVS(0.071)VS(0.928)PS(0.001)R 122.66 1.4502000000000001e-05 117503100.0 18224.7 19780.100000000002 19951.0 19629.7 24242.9 23844.5 22381.5 21834.699999999997 23299.300000000003 23294.6 22996.1 True False 20074.858127684965 21447.038445266993 21304.994835109137 20842.181986716736 22540.16233746472 23650.31829761877 23233.240230126732 21399.189779509215 22320.111446498286 21823.774980518698 20167.72548428852 0.9953952488754421 1.0634336758488263 1.0563905608347652 1.033442368250879 1.117635320602932 1.1726814863700585 1.1520010150984241 1.0610611393029947 1.1067242790411127 1.0821138455856267 1.0 14.299760765554346 -4.032597426834108 1.156300505677003 1.0712878853153247 2.8926888781588742e-08 0.17023280989427703 0.04965500276464426 42.264537979980474 4.645417947376031 0.009129948802928374 102.32671564889218 9.27689354912058e-05 4.032597426834108 -1.0712878563884358 KLGVSVSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 KLGVSVSPSR 10 1 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 KLGVS(0.004)VS(0.403)PS(0.593)R 57.802 0.010019 7992600.0 2680.2 3304.1 3442.5 3378.4 3720.4 4034.0 3504.8 3899.9 3573.8 3782.1 3796.4 True False 2952.2919309410413 3582.5481027399587 3676.1287514341757 3587.0760950969106 3459.091938683232 4001.1484414684396 3638.1770819001486 3822.1134350876378 3423.6056142242724 3543.297560542774 3329.4668673624205 0.8867161165895083 1.0760125405837204 1.1041193373839993 1.0773725157801515 1.0389326809620723 1.2017384767183823 1.0927206146917707 1.1479656015064923 1.0282744206841823 1.0642237035834354 1.0 11.701075468148058 -8.96463260593165 15.103145244234089 1.0124692854001187 1.0826238596137427 0.060068886693319 0.07520631810584893 3.505846773197245 1496.5939168349348 0.01247228406200281 0.013162906217234642 1.0848442565725932e-09 8.96463260593165 0.07015457421362403 KLIDLES(ph)PTPESQK ddPTM_A549_PD325901_60min_R1 1 KLIDLESPTPESQK 14 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 KLIDLES(0.888)PT(0.108)PES(0.004)QK 41.412 0.039352 1284600.0 1496.2 1744.5 1481.4 1271.7 1528.3 1671.3 1387.1 1477.0 2061.5 1816.5 1868.2 True False 1648.0931225557742 1891.515137323282 1581.9367123818704 1350.250020759749 1420.9574803487762 1657.6894869177484 1439.886849550244 1447.5400763159153 1974.8623240593604 1701.805879994171 1638.4232434955409 1.0059019420644955 1.1544728413933967 0.9655238465775439 0.8241155184535954 0.8672713146556649 1.0117590149545872 0.8788247208201687 0.8834958134673551 1.2053432053649544 1.0386851424076509 1.0 10.678092372054708 -8.75110969779068 24.991582789929637 1.0969676289642156 0.9492020772345049 0.26199830497025745 0.09802838498963994 211.19733538439957 510969.58699488844 0.01958896916553536 0.02209122921213603 1.773741397627533e-09 8.75110969779068 -0.14776555172971073 KLIGTAVPQRT(ph)SPTGPK ddPTM_A549_MK2206_60min_R1 1 KLIGTAVPQRTSPTGPK 17 2 C9JB30;Q9UPY8 C9JB30 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 KLIGT(0.001)AVPQRT(0.493)S(0.493)PT(0.013)GPK 52.853 0.0052749 22312000.0 2988.8 4318.8 4783.1 4029.1 5770.4 4236.0 4380.6 3728.2 6008.5 5715.7 5473.8 True False 3493.2363708556572 4538.608472913729 5461.415502935673 5016.229680873173 4921.581804002659 4684.250708370772 5176.498316595153 4256.683767133651 4647.584343602866 4424.519400273951 4114.504390805413 0.8490053817081618 1.1030753747780782 1.3273568294495375 1.2191576929855328 1.1961542233375186 1.1384726478451592 1.2581098049531683 1.034555650650407 1.1295611578368259 1.075346865630116 1.0 12.006502947146494 -10.230758548359116 0.5596627780271706 0.9927134225463159 1.1554692267542848 0.08560451739753894 0.12079913550599525 1.3292663642528326 0.7396152809047795 0.10432157734354765 0.02866863539251049 5.878160656544831e-11 10.230758548359116 0.16275580420796887 KLIGTAVPQRT(ph)SPTGPK ddPTM_A549_PD325901_60min_R1 2 KLIGTAVPQRTSPTGPK 17 2 C9JB30;Q9UPY8 C9JB30 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 KLIGTAVPQRT(0.493)S(0.493)PT(0.014)GPK;KLIGTAVPQRT(0.583)S(0.414)PT(0.002)GPK 90.96799999999999 1.9585e-06 92046000.0 6899.8 6989.4 7944.6 7944.5 9825.1 10464.7 9177.7 9861.8 10946.0 8778.8 9115.6 True False 7600.262616635701 7578.421267301433 8483.768330760764 8435.213721731407 9135.018870754931 10379.47895276023 9526.962395730148 9665.098662567565 10485.977685740354 8224.505069800622 7994.438988549382 0.9506936793840983 0.9479616115847752 1.0612087155724448 1.0551351675600198 1.1426716601176428 1.2983373777230642 1.191698680717413 1.2089777251926128 1.3116589795431124 1.028778264688838 1.0 12.964781080489542 -6.250785837076946 1.3430748565138049 1.169307425391103 0.9477088746629535 0.44961591194263506 0.09206027293822377 0.4373193096215319 1.427235830366483 0.01814890692938237 0.07892371664221291 5.613247129252566e-07 6.250785837076946 -0.2215985507281496 KLIGTAVPQRTS(ph)PTGPK ddPTM_A549_MK2206_60min_R1 1 KLIGTAVPQRTSPTGPK 17 2 C9JB30;Q9UPY8 C9JB30 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 KLIGT(0.001)AVPQRT(0.18)S(0.807)PT(0.012)GPK 69.133 0.00032172 23515000.0 4379.2 5435.9 4573.5 5029.0 8104.1 5189.9 5125.4 4770.0 8654.6 7968.8 8660.7 True False 5118.301898839362 5712.564091393843 5222.091071204093 6261.105225760388 6911.997625436356 5739.0917732231965 6056.618835747797 5446.162107512344 6694.346918556278 6168.642545428041 6510.009166839936 0.7862203827469983 0.8775047691932536 0.8021633975269777 0.9617659615062615 1.0617492922504672 0.8815796761787118 0.9303548859191204 0.8365828630861973 1.028316051021142 0.9475628048036067 1.0 12.668443859534596 -2.4141245762603085 0.22316014306874843 1.0183180837726862 3.2957431870667493e-12 0.2930426628455568 0.07297296165526268 26.481012020930404 0.36415190697354827 0.045302890579970966 9.524877382899701 0.003853678000430716 2.4141245762603085 -1.0183180837693904 KLILDSAR ddPTM_A549_MK2206_60min_R1 2 KLILDSAR 8 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 103.55 0.0021531999999999996 16528700.0 3229.2 3758.2999999999997 3701.2 3537.0 4906.9 3942.0 3540.5 3792.5 5043.6 5461.9 5150.5 False True 3774.210013639952 3949.581417002793 4226.085814527297 4403.565158781962 4185.101510131122 4359.139823512177 4183.763021025688 4330.098489044144 3901.2326529741895 4228.052996545704 3871.488703431488 0.9748730534315359 1.0201712363262452 1.0915919271006815 1.1374345881156438 1.0810057398389576 1.1259595874962673 1.0806600100156347 1.1184582523012836 1.0076828196647811 1.0921000474050657 1.0 11.918672717199435 -8.814095321717343 10.220973031995218 1.0035682470513703 1.08089138856963 0.05857447878127431 0.05182806090375655 0.3452901285162574 65.02061421257622 0.00801121715073081 0.008526611588237571 1.5342801922572895e-09 8.814095321717343 0.07732314151825981 KLILDSAR ddPTM_A549_PD325901_60min_R1 2 KLILDSAR 8 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 87.149 0.0027454999999999997 33153000.0 5078.9 4968.2 5589.0 5098.799999999999 6443.9 6752.200000000001 5225.5 6442.4 5939.3 5668.4 5992.9 False True 5594.506189111434 5386.887649899414 5968.30314938725 5413.74129578502 5991.302694248166 6697.212321884775 5424.359262003318 6313.901278034973 5689.691875472106 5310.496256624804 5255.811292123131 1.0644419820582036 1.024939319638954 1.1355626786547546 1.0300486442309256 1.139938700468054 1.2742490073648318 1.032068877764464 1.2013181081097029 1.0825525421735043 1.0104046666560553 1.0 12.359697761843343 -9.932757382545585 0.9612202357621887 1.0103797075557006 1.1108383292132669 0.22625047769174278 0.0737067239753546 0.519004779750467 0.9766616975825814 0.02618432540467061 0.014188315792801652 1.1674616342495026e-10 9.932757382545585 0.10045862165756625 KLIPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KLIPSPK 7 1 Q96HE9 Q96HE9 PRR11 Proline-rich protein 11 1 KLIPS(1)PK 47.067 0.025254 6607900.0 2980.2 3078.5 2827.5 3181.0 3370.1 4036.3 3052.6 3252.6 3518.6 3390.8 3675.8 True False 3282.747710092715 3337.9359989966897 3019.3911531387453 3377.483145424837 3133.395802213837 4003.4297110310026 3168.7683634468135 3187.7243413846622 3370.725478261103 3176.7043093224534 3223.6999028160335 1.0183167816660295 1.0354363308076122 0.9366229004446672 1.0477039573300442 0.9719874357649383 1.241874191680759 0.9829600952243616 0.9888402883283444 1.0456077115976696 0.9854218460432599 1.0 11.654501732972674 KLITSEEERS(ph)PAK ddPTM_A549_MK2206_60min_R1 3 KLITSEEERSPAK 13 2 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KLITSEEERS(0.999)PAK;KLITS(0.001)EEERS(0.999)PAK;KLIT(0.002)S(0.002)EEERS(0.996)PAK 74.786 0.00023008 59638000.0 4911.200000000001 5603.5 6189.299999999999 5355.0 7915.7 5061.6 5216.4 4828.799999999999 8771.3 7947.400000000001 9003.9 True False 5740.090492688141 5888.694215516362 7067.035807806601 6666.975240395086 6751.311015864382 5597.215152381843 6164.152357824712 5513.297187579789 6784.614554887882 6152.076820290982 6767.983135001794 0.8481242311320594 0.8700811006844806 1.0441863797293176 0.9850756285008561 0.9975366192845267 0.8270137559053417 0.9107812822324769 0.814614498530119 1.002457367217728 0.9089970671579328 1.0 12.72451025810228 -8.896095327339154 24.011318273682992 1.0011747884890085 0.9169971445002801 0.06698730752930016 0.0746880503547982 8.690459116513377 1986.3826259985735 0.01238648703619304 0.013186379871207635 1.2702952456748868e-09 8.896095327339154 -0.0841776439887284 KLITSEEERS(ph)PAK ddPTM_A549_PD325901_60min_R1 6 KLITSEEERSPAK 13 2 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KLITSEEERS(1)PAK;KLIT(0.007)S(0.027)EEERS(0.966)PAK;KLIT(0.006)S(0.006)EEERS(0.988)PAK;KLITSEEERS(1)PAK;KLITSEEERS(1)PAK;KLITSEEERS(1)PAK 151.04 1.2927000000000001e-13 110759200.0 20398.3 19505.0 21809.3 22056.6 25713.4 26293.1 25188.4 26879.7 25002.6 24457.299999999996 28818.100000000002 True False 22469.12039956522 21148.754802803458 23289.41024797483 23418.986087826917 23907.379490414314 26078.977711049512 26146.95834562136 26343.563296783268 23951.82767088358 22913.06190409107 25273.656392987305 0.8890332308941156 0.8367904696477402 0.9214895496655148 0.926616462757838 0.9459406711348624 1.0318640605672578 1.0345538429048347 1.0423328895178314 0.9476993474331441 0.9065986158792905 1.0 14.625346776655046 -6.431543634396256 1.3515433220221877 0.988003207775646 0.8668244797990434 0.5682580816810002 0.04182809096861112 0.2360969452841526 0.8139977853589869 0.005957297813133913 0.02139002847758221 3.702170071215217e-07 6.431543634396256 -0.12117872797660256 KLITSEEERS(ph)PAKR ddPTM_A549_MK2206_60min_R1 4 KLITSEEERSPAKR 14 3 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR;KLITS(0.001)EEERS(0.999)PAKR;KLITSEEERS(1)PAKR 148.15 5.2038e-14 396373000.0 11010.6 12664.9 11022.5 10333.1 15512.099999999999 12182.400000000001 11535.4 11042.7 15549.599999999999 16764.7 17082.899999999998 True False 12868.920096675354 13309.489313838354 12585.65624409033 12864.709963870488 13230.290638754619 13471.53348197736 13631.23286336386 12608.036541850428 12027.640427608738 12977.542626410186 12840.744465944996 1.0021942365417429 1.0365044915531587 0.980134467862733 1.001866363588891 1.0303367280489648 1.0491240221861966 1.06156094761603 0.9818773806525211 0.9366778117505028 1.0106534446525273 1.0 13.648441227351698 -8.50054310636793 23.093129052487356 0.9695283689445555 1.0223774466671534 0.29729001655199716 0.028324638525539937 227.61900560924724 235338.71594499855 0.005174006138221432 0.006224147362328637 3.158325549851308e-09 8.50054310636793 0.05284907772259784 KLITSEEERS(ph)PAKR ddPTM_A549_PD325901_60min_R1 5 KLITSEEERSPAKR 14 3 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR 151.03 2.6451999999999997e-14 555460300.0 19890.28 21757.6 21248.8 20398.5 24836.899999999998 23155.800000000003 21538.5 23144.3 23207.700000000004 22607.6 22965.2 True False 21909.526583149756 23591.189310303853 22690.87134741452 21658.469016645253 23092.441826653467 22967.226842081014 22358.159403819434 22682.668780147877 22232.36107595072 21180.152277762856 20140.625988397296 1.0878274883696017 1.1713235389949832 1.1266219510995528 1.0753622568197414 1.1465602826822099 1.1403432472909272 1.110102507076971 1.1262146863367113 1.1038565081720122 1.0516134051625017 1.0 14.297820903823718 -10.366000521155685 0.5293835091105897 0.986910337171575 1.1269969759934495 0.5975778622592589 0.029225763157042967 0.3919474498461805 0.18025076003665508 0.02637950885153278 0.006017909159622973 4.3052609385780096e-11 10.366000521155685 0.14008663882187455 KLLEDTLFPSS(ph)K ddPTM_A549_PD325901_60min_R1 1 KLLEDTLFPSSK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KLLEDTLFPS(0.427)S(0.572)K 56.482 0.0068029 1428400.0 936.76 1182.8 1383.8 1038.0 938.75 1235.7 1159.4 1268.5 1212.0 1189.5 1143.4 True False 1031.8591855937357 1282.4787070369605 1477.7129894653924 1102.1149025309594 872.815438511688 1225.636868895029 1203.5216014480245 1243.1987723810005 1161.0638548435336 1114.3947669986605 1002.7690486097856 1.0290098074170517 1.2789372675741812 1.4736324296347771 1.0990715200662649 0.8704052440806164 1.222252392606475 1.2001981943066127 1.2397658006143495 1.1578576906150064 1.1113174748897865 1.0 9.969773656522666 -10.401240224615613 0.647635856034793 0.9907983271238371 1.1811338574678043 0.06764528460295538 0.1474559709335062 1.2313481891414637 0.8900444177760801 0.12435778426853764 0.03197864134174476 3.969719086329322e-11 10.401240224615613 0.19033553034396722 KLLLDPS(ph)SPPTK ddPTM_A549_MK2206_60min_R1 1 KLLLDPSSPPTK 12 1 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 KLLLDPS(0.5)S(0.5)PPTK 102.62 0.00016711 4516800.0 1769.4 2464.5 2414.3 2670.4 3410.2 2224.8 2462.5 2276.2 3781.8 3185.9 2815.8 True False 2068.031462323341 2589.932523269398 2756.684043557024 3324.648119878813 2908.564097464622 2460.2268592972837 2909.9043748837057 2598.858320570146 2925.228338293639 2466.2029772963556 2116.5591478734846 0.9770723697474274 1.223652325460176 1.3024365732120813 1.5707796889206238 1.3741945744284387 1.1623709461505403 1.374827808524651 1.2278694517850963 1.3820678440442487 1.1651944524083626 1.0 11.047505090422803 -10.860652259245423 1.0099101861291886 0.9928950544558058 1.3007414072167784 0.18808498103622495 0.15056404721768582 0.49715579038243646 0.8653109347194905 0.11350181582641687 0.025100053375568074 1.378312645802877e-11 10.860652259245423 0.3078463527609726 KLLLDPS(ph)SPPTK ddPTM_A549_PD325901_60min_R1 1 KLLLDPSSPPTK 12 1 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 KLLLDPS(0.499)S(0.499)PPT(0.003)K 101.32 0.00018391 5235300.0 5081.9 4971.2 4610.7 5497.0 6044.8 6116.6 5765.1 5545.9 5462.7 6101.0 6344.4 True False 5597.810746902952 5390.140470427918 4923.6098283914425 5836.537205407208 5620.234101427912 6066.78843755227 5984.494035283769 5435.282673825616 5233.121716050962 5715.781818796825 5564.079020465211 1.0060624096663027 0.9687390223256122 0.8848921466215591 1.0489673464269413 1.0100924305273447 1.0903490793782844 1.0755587785996985 0.9768521715515057 0.9405189424526581 1.0272646735917366 1.0 12.44192719369101 -4.784895524477337 9.442408747838009 0.9872284443707006 3.029419020566091 0.0 0.05849678218043145 616026.3549577714 205952.8336875065 0.00832693730552235 26893683.787988015 1.640984487153597e-05 4.784895524477337 2.0421905761953902 KLLLDPSS(ph)PPTK ddPTM_A549_MK2206_60min_R1 3 KLLLDPSSPPTK 12 1 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 KLLLDPS(0.119)S(0.878)PPT(0.003)K;KLLLDPS(0.108)S(0.89)PPT(0.002)K;KLLLDPS(0.094)S(0.906)PPTK 104.87 0.00010475 62331000.0 9406.4 11850.2 11815.3 11125.599999999999 16098.3 13000.2 11792.0 11942.400000000001 17525.100000000002 17329.9 18078.8 True False 10993.970355599793 12453.324563703412 13490.88720533458 13851.372499447161 13730.261395289057 14375.872535165647 13934.453761879664 13635.271772066115 13555.692831834014 13415.063553861733 13589.33501050328 0.8090145946878553 0.9164042651151186 0.9927555097366715 1.0192825836394017 1.0103703665173354 1.0578790296989842 1.025396294307973 1.0033803538971797 0.9975243690259116 0.9871758657427423 1.0 13.73018723958984 -5.414966736618026 1.8038604052378113 1.0073869494984922 0.7770606399257937 0.9183165842192945 0.018320653609142132 0.13291259249584325 0.5464403757020259 0.0028314508296289195 0.04656661696697061 3.846212397377912e-06 5.414966736618026 -0.2303263095726985 KLLLDPSS(ph)PPTK ddPTM_A549_PD325901_60min_R1 2 KLLLDPSSPPTK 12 1 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 KLLLDPS(0.09)S(0.91)PPTK;KLLLDPS(0.096)S(0.902)PPT(0.002)K 111.43 2.7728000000000003e-05 120862000.0 19359.6 19134.6 20937.3 18627.3 24144.0 21303.3 21441.9 21699.4 21554.2 22944.0 23243.0 True False 21324.972340215725 20747.139894884527 22358.231084212846 19777.86601533229 22448.20873227823 21129.812987886613 22257.88323795789 21266.588444150006 20648.35193074958 21495.311924352452 20384.258349516567 1.0461490418032044 1.0178020479894754 1.0968380944182399 0.9702519304952462 1.101252169560077 1.036575019094954 1.091915283662295 1.0432848759814881 1.0129557610929356 1.0545054696514007 1.0 14.315167847048512 -8.776042053496203 3.478700668933499 1.0055787146223947 1.0512674156017179 0.05435769627404807 0.03883892608656601 0.2232700716344219 5.54138224743287 0.005772907707057908 0.006258671124518482 1.6747806962230002e-09 8.776042053496203 0.045688700979323205 KLLMT(ph)PR ddPTM_A549_MK2206_60min_R1 2 KLLMTPR 7 1 Q13123;D6RCQ4;D6RAY9;D6REL4;E7EQZ7 Q13123 IK Protein Red 1 KLLMT(1)PR;KLLMT(1)PR 63.816 0.016206 6479400.0 2788.1000000000004 2886.9 2863.0 2728.6 4206.299999999999 3555.7 2950.1 3162.7 4695.9 4661.1 4410.799999999999 True False 3258.66311749955 3033.830879053125 3269.0164506083574 3397.107122491507 3587.558842051916 3931.9618139173617 3486.094983287075 3611.0224103625337 3632.286147811384 3608.154272725461 3315.476628112921 0.9828641498686397 0.9150512035972032 0.9859868782935721 1.0246210435285283 1.0820642834975607 1.1859416472965238 1.0514611847139654 1.0891412654649988 1.0955547437771511 1.088276189954361 1.0 11.695000569656425 -6.275828619606564 2.400875248940617 1.0625589184072826 0.9502369359145533 0.5379253681182501 0.04777016586771287 0.22987342594400398 2.5729751258123787 0.008130103441609419 0.024208757341082247 5.29872499834233e-07 6.275828619606564 -0.11232198249272929 KLLMT(ph)PR ddPTM_A549_PD325901_60min_R1 2 KLLMTPR 7 1 Q13123;D6RCQ4;D6RAY9;D6REL4;E7EQZ7 Q13123 IK Protein Red 1 KLLMT(1)PR;KLLMT(1)PR 57.598 0.021478999999999998 9889600.0 3779.8 3649.1 3781.8 4693.7 4504.5 4068.2000000000003 3814.7 4270.3 4814.9 4804.8 4885.0 True False 4163.522513458305 3956.622463517564 4038.4556898108253 4983.619188833872 4188.119459681387 4035.069928007412 3959.8704959839342 4185.125516514457 4612.546497265782 4501.424108007702 4284.1759685663865 0.9718374184456163 0.9235434054408294 0.9426446811339109 1.1632620194407046 0.9775787667010458 0.9418543863775201 0.9243015518125474 0.9768799291208677 1.0766473018635783 1.0507094342144898 1.0 12.064802023332023 -8.73170851875829 24.009317897682898 1.0361945571978441 0.977963007047796 0.16415943793115306 0.0646135252378857 204.92555024001066 165488.3203842586 0.011684232627624651 0.013247495822584573 1.8547760579310946e-09 8.73170851875829 -0.058231550150048106 KLMPS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 KLMPSPLK 8 1 Q8NI77 Q8NI77 KIF18A Kinesin-like protein KIF18A 1 KLMPS(1)PLK 45.358999999999995 0.021085 2926100.0 1393.7 1942.3 1926.1 1544.5 2107.4 2062.2 1674.0 1975.2 1783.1 2287.1 1762.2 True False 1535.1873980122868 2105.984437502443 2056.816728580207 1639.9002571859971 1959.3834941353196 2045.40612692023 1737.7049860479478 1935.803086485577 1708.162507897281 2142.692115681073 1545.4605715061791 0.9933526783644308 1.3626904990853226 1.3308762232450027 1.0611077936383577 1.2678314350172897 1.323492921548178 1.12439295966924 1.252573583678668 1.1052773130488445 1.3864424335283057 1.0 10.59382113263492 -9.218272942376128 0.8179084932998215 1.0190940767227565 1.2265869021424904 0.0 0.15718024828919097 0.3933237684182157 0.5632536186680015 0.030839945968659525 0.024466458687180843 6.049605538534104e-10 9.218272942376128 0.2074928254197339 KLNLT(ph)LSPAK ddPTM_A549_MK2206_60min_R1 1 KLNLTLSPAK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 KLNLT(0.636)LS(0.364)PAK 97.69 0.00031502 14029000.0 2688.8 3469.2 3168.7 2863.1 4339.1 3476.3 2995.7 3640.0 4932.0 4088.9 4518.8 True False 3142.6037051514645 3645.767461848731 3618.0693073848083 3564.5596285294446 3700.824137971011 3844.1597586188163 3539.9799130311135 4155.981147032478 3814.9098747856115 3165.214650135617 3396.657247464556 0.9252048341048452 1.0733398150696907 1.0651852818195082 1.0494316526020457 1.089548891261696 1.1317479152447012 1.0421952099151426 1.2235503450148586 1.1231365418554555 0.9318616567798532 1.0 11.729899929628875 -5.261078059238742 6.618994429067071 1.0757628097639211 0.9223855750408709 0.2618144610117946 0.07121634572201496 0.11377095484637229 31.475084047070478 0.008994313646172444 0.07751937662737718 5.48178427549799e-06 5.261078059238742 -0.1533772347230502 KLNLTLS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 KLNLTLSPAK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 KLNLT(0.007)LS(0.993)PAK 117.92 2.9241e-05 17651000.0 4227.0 3705.8 4509.0 3063.1 5982.4 4521.0 3862.5 4138.6 6062.7 5886.6 5988.2 True False 4940.414259772101 3894.4093912484223 5148.444001324861 3813.559637507785 5102.396884837359 4999.40921920308 4564.26625299018 4725.259223930939 4689.508130142484 4556.812971578745 4501.164674087649 1.0975857622390777 0.8652003810631054 1.1438026320084393 0.8472384179725138 1.1335725871596944 1.110692361020189 1.0140189447557417 1.0497859034425823 1.04184327161792 1.0123630885604904 1.0 12.136082631021578 KLNLTLS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 KLNLTLSPAK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 KLNLT(0.048)LS(0.952)PAK;KLNLT(0.1)LS(0.9)PAK 106.13 0.00012586 55210000.0 4109.1 4510.0 4613.8 4668.7 5197.200000000001 4981.3 4864.9 5409.0 5188.1 4916.7 5113.1 True False 4526.252807040458 4890.073527846378 4926.9202130332615 4957.074995612992 4832.166601366654 4940.733944344751 5050.036431675428 5301.113251721589 4970.062199103739 4606.258722910728 4484.221114611419 1.009373242611093 1.0905067798535908 1.0987237442371762 1.1054483864457136 1.0775932938769426 1.1018042638989918 1.126179174175946 1.182170351602066 1.108344586958313 1.0272148953363742 1.0 12.130641703101668 -10.577315969241667 0.9810022582958492 1.002839505271265 1.1015687590231815 0.410889967831929 0.03936532635057458 0.36315737759337524 0.6493092334202765 0.023337316955176043 0.007240661934731384 2.6465739335372585e-11 10.577315969241667 0.09872925375191643 KLNS(ph)PEETAFQTPK ddPTM_A549_MK2206_60min_R1 1 KLNSPEETAFQTPK 14 1 Q9BTX1-4;Q9BTX1-6;Q9BTX1-5;Q9BTX1-2;Q9BTX1 Q9BTX1-4 NDC1 Nucleoporin NDC1 1 KLNS(0.999)PEET(0.001)AFQTPK 175.16 3.495000000000001e-23 17877000.0 3875.1 4480.6 4423.2 4508.3 5946.7 4331.0 4669.1 4240.6 7115.9 6293.9 6592.7 True False 4529.122142901081 4708.643401810052 5050.476271159931 5612.833702385278 5071.948307545854 4789.303545314873 5517.415032190666 4841.718036292839 5504.160011757282 4872.103618696606 4955.5506407363855 0.9139493209231058 0.9501756198601486 1.0191554152717606 1.1326357269454161 1.023488341709726 0.9664523465757968 1.1133808192444965 0.9770292722855455 1.1107060366836194 0.9831608981343434 1.0 12.27482965741642 -5.755715681091137 3.150617248825751 1.0491181710064301 0.9231318639171519 0.3344843668746005 0.05617572551224386 0.18315321516506858 3.6535158577874998 0.00777964691978043 0.03402039291533715 1.7550290880566904e-06 5.755715681091137 -0.12598630708927827 KLNS(ph)PEETAFQTPK ddPTM_A549_PD325901_60min_R1 3 KLNSPEETAFQTPK 14 1 Q9BTX1-4;Q9BTX1-6;Q9BTX1-5;Q9BTX1-2;Q9BTX1 Q9BTX1-4 NDC1 Nucleoporin NDC1 1 KLNS(1)PEETAFQTPK;KLNS(1)PEETAFQTPK;KLNS(1)PEETAFQTPK 219.96 1.5015e-39 110075400.0 20747.48 21002.58 21347.6 20025.010000000002 25500.7 25695.3 23336.8 24937.68 25664.8 24088.9 25403.4 True False 22853.748896112487 22772.541125160922 22796.376509547175 21261.909387602587 23709.61880463916 25486.04599604955 24224.894694386956 24440.27840916849 24586.197707746123 22567.922742962608 22278.94284542054 1.0258004185692364 1.0221553725939847 1.0232252341467356 0.9543500127059662 1.0642165101434649 1.143952214110026 1.0873448916525412 1.0970124829864725 1.1035621339097712 1.0129709878761806 1.0 14.443393156758205 -6.881873574331023 16.612941357932417 1.0648311006140356 1.0087144070903828 0.35138994123919143 0.042462762441995594 1.2722885285390435 177.11142774177733 0.0075353978256054825 0.01424095479263643 1.3125819437053187e-07 6.881873574331023 -0.05611669352365278 KLNSPEET(ph)AFQTPK ddPTM_A549_MK2206_60min_R1 2 KLNSPEETAFQTPK 14 1 Q9BTX1-4;Q9BTX1-6;Q9BTX1-5;Q9BTX1-2;Q9BTX1 Q9BTX1-4 NDC1 Nucleoporin NDC1 1 KLNS(0.355)PEET(0.645)AFQTPK;KLNS(0.43)PEET(0.57)AFQTPK 143.67 3.2486999999999996e-13 35686000.0 4925.1 5519.4 5115.1 4942.9 6824.200000000001 5659.2 5040.8 5811.6 7652.9 8459.5 8397.1 True False 5756.336472865767 5800.313884736507 5840.498095182257 6153.910721895213 5820.36921996308 6258.052787727071 5956.648110827933 6635.412097278563 5919.530369170073 6548.493074622092 6311.868321829825 0.9119861472643954 0.9189535631907769 0.9253200157840245 0.9749745096252548 0.922130963954543 0.9914739136878646 0.943721859695116 1.0512595889128027 0.9378412329511316 1.0374888607821382 1.0 12.623851392829573 -6.055813028596218 0.6004916790527219 0.9762269785345695 0.894277854380965 0.3722925195271942 0.03720270983737517 1.5716695375148828 0.6472215150648807 0.0062722864812101795 0.07408936902529385 8.794010329393832e-07 6.055813028596218 -0.08194912415360456 KLNSPEETAFQT(ph)PK ddPTM_A549_MK2206_60min_R1 4 KLNSPEETAFQTPK 14 1 Q9BTX1-4;Q9BTX1-6;Q9BTX1-5;Q9BTX1-2;Q9BTX1 Q9BTX1-4 NDC1 Nucleoporin NDC1 1 KLNSPEET(0.001)AFQT(0.999)PK;KLNSPEETAFQT(1)PK;KLNSPEETAFQT(1)PK;KLNSPEETAFQT(1)PK 143.39 3.3375e-13 46984600.0 15543.699999999999 17692.8 16725.6 14986.0 20558.4 17228.600000000002 17056.9 15500.100000000002 24879.4 23415.3 24854.899999999998 True False 18167.09655302098 18593.28794794109 19097.541580962334 18657.570672747115 17534.286593547808 19051.719016580908 20155.91794191021 17697.286642065428 19244.25562423786 18125.76746736788 18682.742369657175 0.9723998861391109 0.9952119223213521 1.0222022657647325 0.9986526765497263 0.9385285225591621 1.019749597763709 1.0788522125448583 0.9472531543767239 1.0300551837343026 0.9701877330817406 1.0 14.18941861793309 KLNSPEETAFQT(ph)PK ddPTM_A549_PD325901_60min_R1 1 KLNSPEETAFQTPK 14 1 Q9BTX1-4;Q9BTX1-6;Q9BTX1-5;Q9BTX1-2;Q9BTX1 Q9BTX1-4 NDC1 Nucleoporin NDC1 1 KLNSPEETAFQT(1)PK 123.63 7.3637e-07 46490000.0 4044.6 4322.3 4314.4 4507.5 4334.7 4391.3 5073.4 4907.9 5077.4 4868.2 4735.7 True False 4455.204814522848 4686.555390113168 4607.201128594798 4785.918037724756 4030.2456259031865 4355.538708730876 5266.471013271007 4810.008084326935 4864.014535134121 4560.821021187793 4153.238922075706 1.0727061212014806 1.1284097732020004 1.1093031763971362 1.1523339079498103 0.9703861736634574 1.0487089210254403 1.268039501719523 1.1581342115331494 1.1711376654206986 1.0981359625004155 1.0 12.02002115227818 -10.919405818378708 1.2055496823218952 1.000791338770491 1.1240575908693797 0.06262301140285009 0.07720428816075553 0.5113652917784262 1.333812965306112 0.05125275003917605 0.012451174226705651 1.2039104429440445e-11 10.919405818378708 0.12326625209888875 KLNSS(ph)SSSSSNSSNEREDFDSTSSSSSTPPLQPR ddPTM_A549_PD325901_60min_R1 1 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 KLNS(0.031)S(0.116)S(0.116)S(0.116)S(0.116)S(0.116)S(0.116)NS(0.116)S(0.116)NEREDFDS(0.009)T(0.009)S(0.009)S(0.009)S(0.003)S(0.001)STPPLQPR 46.981 0.0017957999999999997 14420000.0 431.78 855.12 429.62 485.4 773.69 728.77 715.51 713.94 576.84 995.62 952.37 True False 475.61398774036394 927.1839634439016 458.77659671493115 515.382055576616 719.3486834856009 722.8351387429233 742.7391245920955 699.6999066249045 552.5974208151347 932.7563832864278 835.2345275708425 0.569437651390703 1.110088164267443 0.5492787732916355 0.6170507067943293 0.8612535278896113 0.865427750987718 0.8892581665083263 0.8377286660548857 0.6616074917571757 1.116759847080572 1.0 9.706037542158594 -6.800906797079123 24.956970109583136 0.8435068349721048 0.7283520937023713 0.1562776692018394 0.17852890289558057 300.9341066858434 190292.90657852584 0.02536632354357881 0.04793838446041361 1.5815874236219544e-07 6.800906797079123 -0.11515474126973346 KLNSSSSSS(ph)SNSSNEREDFDSTSSSSSTPPLQPR ddPTM_A549_PD325901_60min_R1 1 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 KLNS(0.039)S(0.039)S(0.034)S(0.03)S(0.034)S(0.238)S(0.209)NS(0.209)S(0.036)NEREDFDS(0.038)T(0.038)S(0.045)S(0.009)S(0.002)SSTPPLQPR 79.07 2.5679e-06 9664600.0 683.36 772.04 751.42 739.28 792.18 986.56 774.05 829.31 782.77 893.36 660.23 True False 752.7342041369566 837.1025202746156 802.4158798555312 784.9436465733017 736.5400096726383 978.5257824529259 803.5068963264123 812.7687614688906 749.8728990560006 836.9530971382281 579.0258955428013 1.3000009324821549 1.445708260577678 1.3858030979828897 1.3556278788489504 1.2720329355601223 1.6899516757115292 1.387687325405669 1.4036829228630088 1.2950593485167718 1.4454502010719847 1.0 9.17748406050351 -9.930197484222012 0.6622000636415372 1.010717644415464 1.410699104894055 0.0 0.16428272088808984 0.29943454665898384 0.2668353406495225 0.056594931435421617 0.023736228659627826 1.174363422009372e-10 9.930197484222012 0.39998146047859096 KLNSSSSSSSNSSNEREDFDSTSSSS(ph)STPPLQPR ddPTM_A549_PD325901_60min_R1 1 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 KLNSSSSSSSNSSNEREDFDS(0.002)T(0.011)S(0.071)S(0.071)S(0.306)S(0.437)S(0.094)T(0.008)PPLQPR 203.52 2.8639e-89 81309000.0 3233.4 3118.1 3374.3 2565.8 3695.4 3574.9 3462.7 2898.6 3427.2 3847.8 3433.4 True False 3561.6523876967285 3380.8732299729036 3603.3002893142566 2724.283638645409 3435.8478524379166 3545.7871996543167 3594.4749433621455 2840.78514909229 3283.1667024090393 3604.8492513303445 3011.1135661158282 1.1828356219360618 1.1227983122317253 1.1966670171003602 0.9047429061799174 1.1410555520394976 1.1775667445941562 1.1937360927900245 0.9434334131597525 1.0903496763970097 1.1971814321106469 1.0 11.556081405937029 -14.999999996544314 0.0750746306059874 0.6310142967731353 1.229062850905139 0.0 0.10689254863245382 220.99047971970717 1.2340997618054077 13.869069799878101 1.6287321038717475 1.00000000795701e-15 14.999999996544314 0.5980485541320036 KLNSSSSSSSNSSNEREDFDSTSSSSST(ph)PPLQPR ddPTM_A549_MK2206_60min_R1 2 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 KLNSSSSSSSNSSNEREDFDS(0.066)T(0.13)S(0.13)S(0.097)S(0.061)S(0.015)S(0.19)T(0.312)PPLQPR;KLNSSSSSSSNSSNEREDFDS(0.009)T(0.041)S(0.287)S(0.287)S(0.027)S(0.004)S(0.039)T(0.306)PPLQPR 230.54 7.760599999999998e-116 78023000.0 3340.6000000000004 3422.3 3836.9 2725.8 3600.7 3771.6 3115.3999999999996 2076.23 4708.1 5525.200000000001 5255.5 True False 3904.4116101714435 3596.4804521748283 4381.030115032905 3393.621122365813 3071.0417998184485 4170.70820861454 3681.427853609215 2370.5419606877053 3641.7228672907813 4277.053482581946 3950.4143055789095 0.9883549694161193 0.910405890110249 1.1090052273367543 0.8590544838735586 0.7773973974024493 1.0557647593379065 0.9319093059201861 0.6000742649549302 0.9218584648571712 1.082684789932475 1.0 11.947788250675828 KLNTT(ph)TMSNATANSSIR ddPTM_A549_MK2206_60min_R1 1 KLNTTTMSNATANSSIR 17 1 O43663-2;O43663-4;O43663;G3V3N7;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 KLNT(0.041)T(0.918)T(0.041)MS(0.001)NATANSSIR 46.578 0.019216999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KLNVTEQEKIDK ddPTM_A549_MK2206_60min_R1 1 KLNVTEQEKIDK 12 2 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879 P06733 ENO1 Alpha-enolase;Enolase 0 117.92 6.9209e-06 5946700.0 2696.5 2889.6 2830.4 2772.2 4053.1 2355.2 2160.2 2027.1 4392.5 3900.2 4124.5 False True 3151.6032769045373 3036.6682975204944 3231.793280405831 3451.389124448785 3456.894359109102 2604.4257007447686 2552.680377918286 2314.447632733391 3397.6057633811447 3019.1421111934587 3100.2728195909467 1.0165567549375745 0.9794842177538284 1.042422221677974 1.113253357136539 1.1150290830099294 0.8400633919334878 0.8233728211877461 0.7465303111739572 1.0959054125531535 0.9738311067707285 1.0 11.59817946085595 -2.0879405661261328 13.886342111497605 1.0061304573718683 0.9888369556905693 0.0 0.12172296455123616 0.0 0.0 0.017222208161670808 0.0 0.008166941295704049 2.0879405661261328 -0.01729350168129906 KLNVTEQEKIDK ddPTM_A549_PD325901_60min_R1 2 KLNVTEQEKIDK 12 2 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879 P06733 ENO1 Alpha-enolase;Enolase 0 ; 137.68 6.8699e-09 22761000.0 7208.9 6830.200000000001 7885.299999999999 8976.7 10399.2 10335.400000000001 9835.2 11192.5 8845.4 9245.6 9498.1 False True 7940.742221088312 7405.804924588983 8420.443876160904 9531.17037143513 9668.796067292402 10251.231929090944 10209.483918027947 10969.256807153613 8473.658598707088 8661.831238136036 8329.893913416658 0.9532825151948751 0.8890635344900039 1.0108704821076293 1.1442126959244487 1.1607345985186226 1.230655760522911 1.2256439306608577 1.3168543226565983 1.0172588855013958 1.039848925829024 1.0 13.02408240671602 -5.9697923218896 4.818920147159849 1.0800475220310939 0.9240033715987648 0.3022855141395723 0.10650124652929659 0.24726720568804872 14.281991039275333 0.018490633772718826 0.058749517395473586 1.0720318245744288e-06 5.9697923218896 -0.1560441504323291 KLPAARS(ph)EDGR ddPTM_A549_PD325901_60min_R1 1 KLPAARSEDGR 11 2 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 KLPAARS(1)EDGR 55.841 0.0053442 8260600.0 2080.9 2109.4 1972.5 2115.4 2306.3 2241.0 2436.3 2404.9 2389.7 2509.4 2420.2 True False 2292.1514361223863 2287.1665409399425 2106.365711606075 2246.063453578024 2144.313444303071 2222.7500390011824 2529.014729694515 2356.932382892448 2289.269219405603 2350.956055743117 2122.5307429118457 1.0799143634441979 1.0775658013802134 0.9923840767160835 1.0582006696858048 1.0102626081925872 1.0472168878703016 1.1915091162472513 1.110434979923557 1.0785564482637424 1.107619318869276 1.0 11.051569734706717 -5.570270882222014 24.997582986373363 1.0505099251785706 1.0793292508255294 0.0 0.05652024715464372 331.20822705647174 174699.23094877874 0.008263459819467946 0.03200429106716046 2.689856538075364e-06 5.570270882222014 0.028819325646958882 KLPATTAT(ph)PDSSK ddPTM_A549_MK2206_60min_R1 2 KLPATTATPDSSK 13 1 Q5JPT2;Q96B97-2;Q96B97;Q5VSN0;Q96B97-3;Q5JPT1 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 KLPAT(0.002)T(0.002)AT(0.987)PDS(0.004)S(0.005)K;KLPAT(0.004)T(0.005)AT(0.985)PDS(0.006)S(0.001)K 58.09 0.0075326 4096100.0 2215.0 2729.7 2990.3 2299.8 3023.2 2598.03 2757.6 2439.76 3738.8 3514.4 3658.6000000000004 True False 2588.837848449306 2868.6300705086155 3414.369504804112 2863.2511032419457 2578.4912848088234 2872.951810167261 3258.6202250474353 2785.6034514516373 2891.967769636749 2720.494599143198 2750.0686477768045 0.9413720819449944 1.0431121684281073 1.241557918041187 1.0411562291569119 0.9376097890841064 1.0446836708930147 1.184923230073457 1.0129214242355584 1.0515983926345467 0.9892460689454008 1.0 11.425251916597949 -10.277339092542661 0.6701566959919378 0.999284559533949 1.059961748317158 0.06678046981680963 0.08576659622057846 1.9284980454797571 1.5842301318323584 0.06100227048325995 0.018487989512408067 5.280328083429022e-11 10.277339092542661 0.060677188783208935 KLPATTAT(ph)PDSSKTEMDSR ddPTM_A549_PD325901_60min_R1 2 KLPATTATPDSSKTEMDSR 19 2 Q5JPT2;Q96B97-2;Q96B97;Q5VSN0;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 KLPAT(0.002)T(0.006)AT(0.899)PDS(0.03)S(0.03)KT(0.03)EMDS(0.005)R;KLPAT(0.006)T(0.026)AT(0.773)PDS(0.047)S(0.047)KT(0.047)EMDS(0.053)R 56.72 0.0037004 27237000.0 4889.0 4746.9 4897.3 5394.5 7496.2 6776.9 5828.2 5660.2 7451.1 5595.6 5694.3 True False 5385.327680908422 5146.937922247 5229.660227857247 5727.706013201597 6969.692772486086 6721.71117327403 6049.995340313412 5547.3028706589985 7137.956178898224 5242.292861048929 4993.937199141771 1.0783731284874614 1.0306372941837398 1.0472018408152963 1.1469319266141207 1.3956308408691758 1.3459743094945575 1.2114680459644405 1.1108074950586735 1.4293243775922755 1.0497314347384743 1.0 12.285961963546072 -6.520485023526147 24.927382946280204 1.2246350637359895 1.0577839626640884 0.24793461785712723 0.12838705587248436 123.70471226721403 1288215.0180401562 0.023666128360872646 0.049939315200479235 3.016580896970606e-07 6.520485023526147 -0.16685110107190115 KLPEELGR ddPTM_A549_PD325901_60min_R1 1 KLPEELGR 8 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 51.276 0.02985 1142400.0 737.04 957.58 786.5 854.12 1119.7 813.14 1006.2 729.83 908.62 791.44 1062.2 False True 811.8637582198289 1038.2786272273024 839.8766196087087 906.8770525527389 1041.0561347552987 806.5180574357074 1044.4914916137675 715.2729681094407 870.4338612111641 741.4683433320047 931.5561338405755 0.8715135124200358 1.114563674168229 0.9015845520184652 0.973507682048004 1.117545252440432 0.8657750490146342 1.1212330139543898 0.7678259442729953 0.9343869141010114 0.795945962241818 1.0 9.863498895681737 KLPFQR ddPTM_A549_MK2206_60min_R1 1 KLPFQR 6 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P0DPK2;P0DPK5;P68431;Q71DI3;Q16695;Q5TEC6;A0A590UJL8 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 97.64 0.034845 99019000.0 5445.9 5764.6 5691.8 4807.5 6756.0 4781.1 4758.8 5188.7 6940.2 7023.1 6931.3 False True 6365.034780528244 6057.99351740263 6498.98282695517 5985.337715816875 5762.201349619083 5287.032828562673 5623.412361095055 5924.214114727315 5368.2557812220375 5436.576832245218 5210.066915851794 1.2216800442931786 1.1627477372643702 1.2473895118663079 1.1488024650137016 1.1059745378869132 1.0147725382329942 1.079335918697252 1.137070638517656 1.0303621561728793 1.0434754332433351 1.0 12.347086186637576 -6.198499272956249 0.2837586298830061 0.9961561791987531 1.33006672424699 0.6860053078000168 0.04445437490678165 1.8217061872655758 0.1617175894890755 0.022644728143939974 0.1998022682062096 6.331414216393855e-07 6.198499272956249 0.3339105450482368 KLPFQR ddPTM_A549_PD325901_60min_R1 2 KLPFQR 6 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P0DPK2;P0DPK5;P68431;Q71DI3;Q16695;Q5TEC6;A0A590UJL8 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 ; 97.64 0.034845 292120000.0 7142.7 6457.700000000001 6689.200000000001 7329.0 7861.2 6688.8 6629.9 7905.4 7124.9 7444.2 7114.599999999999 False True 7867.821645822172 7001.913042300121 7143.169337427296 7781.695684633331 7309.056431667732 6634.328630464575 6882.204472520485 7747.720595333675 6825.465230507172 6974.171941564877 6239.549303165278 1.2609599289216105 1.1221825010258515 1.1448213629474198 1.2471566945846126 1.1714077534349958 1.063270487677536 1.102997049647351 1.2417115754503796 1.0939035656060387 1.1177364906832181 1.0 12.60722610836961 -10.34146108172254 0.2178580682045148 0.9049667401242032 1.2095812503478538 0.20092533844881877 0.0698692598072584 3.1777736049976975 0.2593397686046412 0.28093000026005177 0.07320242521340505 4.5555300764684264e-11 10.34146108172254 0.3046145102236506 KLPFTAGANGEQKDS(ph)DTEK ddPTM_A549_MK2206_60min_R1 2 KLPFTAGANGEQKDSDTEK 19 2 Q6UB99;A0A2R8Y4T9;A0A2R8YE03;A0A2R8YEI0;A0A087WTN8;X5D778 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 KLPFTAGANGEQKDS(0.733)DT(0.267)EK;KLPFTAGANGEQKDS(0.962)DT(0.038)EK 134.31 2.1415000000000002e-17 31729000.0 6015.1 6011.9 6561.7 5353.299999999999 8241.7 7321.799999999999 6769.7 7259.2 8629.5 9002.8 8285.8 True False 7030.301824924338 6317.880031098927 7492.24772754344 6664.858740318769 7029.35684771397 8096.588016182504 7999.666861583847 8288.21383036763 6674.93202847981 6969.0612272838525 6228.207183553556 1.1287841938670287 1.0143978587902736 1.2029541578719087 1.0701087076740563 1.1286324684695719 1.2999869428818402 1.2844252970113255 1.3307543545201588 1.0717260732921494 1.1189514128056985 1.0 12.604601221647062 -8.969985989823458 14.35191596096668 1.031626616758381 1.1807282132285415 0.22383905379558844 0.09625633973395152 1.6239000034075035 776.0131000179605 0.017686276437242264 0.018526317621130092 1.071553872604695e-09 8.969985989823458 0.14910159647016052 KLPFTAGANGEQKDS(ph)DTEK ddPTM_A549_PD325901_60min_R1 2 KLPFTAGANGEQKDSDTEK 19 2 Q6UB99;A0A2R8Y4T9;A0A2R8YE03;A0A2R8YEI0;A0A087WTN8;X5D778 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 KLPFTAGANGEQKDS(1)DTEK;KLPFTAGANGEQKDS(0.935)DT(0.065)EK 191.62 1.1415e-44 59231000.0 9218.2 9267.2 8644.4 9839.5 12010.8 11447.0 9150.6 10993.2 11525.1 11812.7 10394.5 True False 10154.024877919825 10048.179467241234 9231.060967000018 10447.263567874157 11167.202843010586 11353.779427240754 9498.83109040046 10773.932002001433 11040.740126614855 11066.844106032013 9116.042396164434 1.1138632793318426 1.1022523843755923 1.012617160587579 1.1460306033975702 1.2250055844089949 1.2454724247462743 1.041990666300223 1.1818650609319845 1.2111330385277976 1.2139965595912956 1.0 13.154191918852172 -2.0460032557242527 20.959859299731242 1.1171017762071351 0.0031163502656903486 0.0 0.0862798958389223 0.0 0.0 0.012822659342322986 0.0 0.008994908383978137 2.0460032557242527 -1.1139854259414448 KLPFTAGANGEQKDS(ph)DTEKQGPER ddPTM_A549_PD325901_60min_R1 2 KLPFTAGANGEQKDSDTEKQGPER 24 3 Q6UB99;A0A2R8Y4T9;A0A2R8YE03;A0A2R8YEI0;A0A087WTN8;X5D778 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 KLPFT(0.001)AGANGEQKDS(0.982)DT(0.018)EKQGPER;KLPFT(0.004)AGANGEQKDS(0.981)DT(0.015)EKQGPER 59.598 0.00012690000000000002 27988000.0 4218.4 4169.2 5055.1 5827.4 6358.8 5450.200000000001 5423.0 6468.700000000001 6480.6 5789.7 5831.5 True False 4646.648862578054 4520.553115808675 5398.169484785737 6187.345263014363 5912.179824669102 5405.815378208049 5629.375232579463 6339.676703903023 6208.242918893562 5424.137353923619 5114.262468924232 0.9085667563627138 0.8839110513543037 1.055512797316643 1.2098216117398155 1.1560180691924302 1.057007811205502 1.1007208305762968 1.2396072243895908 1.2139077641432519 1.060590336706862 1.0 12.320310487654348 -5.866553601479208 4.0291812275367525 1.1198845766136487 0.8955194802044772 0.6086648908893185 0.07112837032174227 0.13928877836762385 4.109256283038071 0.012770370079339347 0.044510942127601524 1.359710334803817e-06 5.866553601479208 -0.22436509640917146 KLPPPPPQAPPEEENES(ph)EPEEPSGVEGAAFQSR ddPTM_A549_PD325901_60min_R1 1 KLPPPPPQAPPEEENESEPEEPSGVEGAAFQSR 33 1 R4GMQ1;O60341 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 KLPPPPPQAPPEEENES(0.999)EPEEPS(0.001)GVEGAAFQSR 61.526 0.00027160000000000004 7918400.0 1354.6 1119.1 1001.2 1483.1 1281.0 1212.9 1015.9 1633.7 1176.6 1066.1 1873.8 True False 1492.1179947961862 1213.4104844817914 1069.1474527046905 1574.7077186355148 1191.0269792100905 1203.0225445357132 1054.5606304218113 1601.1145718871428 1127.1515937367167 998.7862640582359 1643.3344789968662 0.9079819196071475 0.7383831471864988 0.6505963736349801 0.9582393230115619 0.7247623623993602 0.7320618899629424 0.6417200173792631 0.9743083908666631 0.6858929865724956 0.607780264348814 1.0 10.682410436330642 -10.940589639043075 1.0952086133798455 1.0052978215215758 0.7700955631587045 0.0 0.16092077010029765 0.4505064062057179 0.9233580117483378 0.08409660009474462 0.01792080329135486 1.1465958378686619e-11 10.940589639043075 -0.23520225836287123 KLPS(ph)DSGDLEALEGK ddPTM_A549_MK2206_60min_R1 2 KLPSDSGDLEALEGK 15 1 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 KLPS(0.817)DS(0.183)GDLEALEGK;KLPS(0.838)DS(0.162)GDLEALEGK 164.94 1.7518000000000003e-20 21301400.0 7960.2 7150.9 6229.6 5576.6 7413.3 5959.7 4854.299999999999 6303.9 7074.5 7210.5 7112.5 True False 9303.687151795099 7514.850266036582 7113.050953793158 6942.867250343084 6322.813390339132 6590.351498271315 5736.263474923037 7197.497129884076 5472.137045655072 5581.643042090262 5346.269954986205 1.7402202339442292 1.4056249178042062 1.330469844149782 1.2986376125410222 1.1826588338365054 1.2327008463395708 1.072946843915561 1.346265188717476 1.023542973274568 1.0440256644512564 1.0 12.384316971642052 -2.0000000000000018 0.23845363785193072 0.9877401650171269 4.966873095172414 0.7929644026176615 0.09450768184161241 12.732983098236382 0.15237854535762402 0.04751476611140597 20.319877046196197 0.009999999999999959 2.0000000000000018 3.979132930155287 up KLPS(ph)DSGDLEALEGK ddPTM_A549_PD325901_60min_R1 4 KLPSDSGDLEALEGK 15 1 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 KLPS(0.96)DS(0.04)GDLEALEGK;KLPS(0.856)DS(0.144)GDLEALEGK;KLPS(0.967)DS(0.033)GDLEALEGK;KLPS(0.998)DS(0.002)GDLEALEGK 150.29 2.356e-14 22814400.0 8586.4 7891.200000000001 8394.7 9143.099999999999 9192.7 7593.8 8332.1 9054.300000000001 9896.099999999999 13256.3 13510.4 True False 9458.08500702641 8556.219118168814 8964.414823431938 9707.848521513308 8547.036465093368 7531.958610516366 8649.182625000063 8873.704883539058 9480.20133161476 12419.294955665688 11848.706449481935 0.7982377694435959 0.7221226346225262 0.7565732902281407 0.8193171603080577 0.7213476425915736 0.635677712384012 0.7299685127550978 0.7489176072825271 0.8001043297033716 1.048156185539452 1.0 13.532441944936068 -10.06881531655511 0.6399076876882805 0.9993108364214675 0.7380496595788572 0.8154756139396229 0.050258290534113924 0.24745178851772334 0.19713036406203768 0.03148729743750891 0.011311707142025208 8.5346297143108e-11 10.06881531655511 -0.2612611768426103 KLPS(ph)DSGDLEALEGKDKEK ddPTM_A549_MK2206_60min_R1 1 KLPSDSGDLEALEGKDKEK 19 3 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 KLPS(0.987)DS(0.013)GDLEALEGKDKEK 102.27 3.8438e-10 22754000.0 3253.7 3661.7 3024.1 2999.9 4417.0 3100.6 2352.5 3048.4 3832.0 3808.3 3608.3 True False 3802.845014672462 3848.0648896147536 3452.9628530509044 3734.8756346706286 3767.265151164519 3428.7034339882944 2779.9187987467703 3480.5200353334626 2964.058118446565 2948.0023850207826 2712.2595259861837 1.402094813655319 1.418767213368193 1.2730945619208027 1.3770347560352358 1.3889766503058858 1.2641502043362205 1.024945722233563 1.2832547925397875 1.092837204569805 1.086917515368992 1.0 11.405279515842613 -7.881050682725121 0.40724250897859715 1.0042501563274695 1.4299632698659523 0.7035766067904766 0.0823445964295004 0.38532942432754946 0.14241234133987812 0.030267352172493694 0.06004464998612746 1.3150713527169857e-08 7.881050682725121 0.42571311353848285 KLPS(ph)DSGDLEALEGKDKEK ddPTM_A549_PD325901_60min_R1 3 KLPSDSGDLEALEGKDKEK 19 3 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 KLPS(0.725)DS(0.275)GDLEALEGKDKEK;KLPS(0.716)DS(0.284)GDLEALEGKDKEK;KLPS(0.994)DS(0.006)GDLEALEGKDKEK 122.04 4.9431e-15 74131000.0 8204.6 8687.900000000001 9840.9 9368.0 10770.099999999999 10235.1 10037.6 11802.0 13779.599999999999 15168.1 15727.3 True False 9037.524952092712 9420.059823187707 10508.76265213902 9946.640083728349 10013.645330827947 10151.748739036595 10419.586360785477 11566.59985151011 13200.49133184979 14210.383577395856 13792.941803568912 0.6552282378045168 0.68296234098155 0.7618942211022659 0.7211398572822706 0.7259977946283311 0.7360104090637023 0.755428864210057 0.8385883168532808 0.9570468374218887 1.030264883283922 1.0 13.751642571918929 -8.515694027607298 1.2534135502651569 0.9869578720090059 0.7123203063059381 0.9439960690499182 0.02965071487566687 0.06060311681088423 0.18473541003418847 0.0055327759057269684 0.006512343216559055 3.0500430719774387e-09 8.515694027607298 -0.27463756570306774 KLPS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 KLPSPAR 7 1 H7C3Y8;A0A3B3ITK3;A0A3F2YNW9;A0A3B3IUA1;A0A3B3IU40;A0A3B3IT28;A0A3B3ITE5;A0A3B3ITF7;A0A3B3ITW6;Q12756;Q12756-3;Q12756-2 H7C3Y8 KIF1A Kinesin-like protein KIF1A 1 KLPS(1)PAR 56.563 0.015600999999999999 6823600.0 844.66 1205.1 986.55 932.27 1160.1 1388.6 1052.9 1537.3 1014.2 1065.0 1321.3 True False 930.4092613941723 1306.658006298817 1053.503215607083 989.8542005612113 1078.6185781277325 1377.2917019888628 1092.9686856689875 1506.637345511481 971.5767009755047 997.7557182459632 1158.7884764108007 0.8029155280142206 1.1276070075757254 0.9091419504534378 0.854214742993612 0.9308157615345086 1.188561786750631 0.9431994776599076 1.3001832311778745 0.8384418043099974 0.8610335178136945 1.0 10.178401527552134 -3.670050321098376 16.705397976925543 0.9634616921062187 0.4211762289575639 0.0 0.1539151473427561 0.0 0.0 0.019303299815724317 0.0 0.00021377143811556731 3.670050321098376 -0.5422854631486548 KLPS(ph)PVTITPSSMR ddPTM_A549_MK2206_60min_R1 4 KLPSPVTITPSSMR 14 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 KLPS(0.721)PVT(0.251)IT(0.001)PS(0.014)S(0.014)MR;KLPS(0.927)PVT(0.067)IT(0.002)PS(0.002)S(0.002)MR;KLPS(0.963)PVT(0.036)ITPSSMR;KLPS(0.815)PVT(0.183)IT(0.003)PSSMR 69.081 0.00087278 37526200.0 7064.2 8577.6 9285.7 8148.300000000001 11354.300000000001 7561.0 7887.0 7791.099999999999 13074.3 11041.4 11185.400000000001 True False 8256.46425689191 9014.163202108182 10602.551888024456 10144.633865791091 9684.097510950263 8361.100001414401 9319.965809018391 8895.512284243061 10112.99192536689 8547.140071414666 8407.7564786647 0.9820056370380487 1.0721246773716966 1.2610441221661464 1.2065803632079313 1.151805185547937 0.9944507815647737 1.108496164543834 1.0580125990585094 1.2028169406463367 1.0165779769078305 1.0 13.037505168506584 KLPS(ph)PVTITPSSMR ddPTM_A549_PD325901_60min_R1 3 KLPSPVTITPSSMR 14 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 KLPS(0.958)PVT(0.031)IT(0.003)PS(0.004)S(0.004)MR;KLPS(0.928)PVT(0.072)ITPSSMR;KLPS(0.98)PVT(0.019)ITPSSMR 80.316 0.00021901 42021800.0 6864.800000000001 7458.5 7118.7 7152.900000000001 9005.3 8859.5 7110.3 7820.299999999999 8873.5 8380.6 8562.1 True False 7561.709442401338 8087.0539706080235 7601.817790220612 7594.718387585444 8372.798794598464 8787.35116935786 7380.886357405454 7664.31798159333 8500.577653427465 7851.447485757862 7509.015979623799 1.0070173592545981 1.0769791930863868 1.0123587179530096 1.0114132674899354 1.1150327575968138 1.1702400411988612 0.9829365628511069 1.0206820710451214 1.1320494824480776 1.0456027137328343 1.0 12.874408146551914 -6.716234894840167 24.999964735344502 1.0657198209860503 1.0294745399957608 0.10282176713017999 0.05619877320178838 320.04738295296227 176997.64415330175 0.00938207790730508 0.019530299171945008 1.9220518764503423e-07 6.716234894840167 -0.03624528099028956 KLPS(ph)TTL ddPTM_A549_MK2206_60min_R1 1 KLPSTTL 7 1 E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 KLPS(0.89)T(0.097)T(0.013)L 48.79600000000001 0.045152 60226000.0 1712.8 1509.0 1599.0 1463.9 2281.3 1434.4 1314.1 1361.1 2091.1 2215.4 2113.4 True False 2001.8787660604812 1585.8016545398752 1825.762243982803 1822.5555657169675 1945.723792019837 1586.1872559223398 1552.8549600140816 1554.0400931939305 1617.469188800525 1714.9396013378787 1588.5844531272885 1.260165150250326 0.9982482526617108 1.1493013420776002 1.1472827661941947 1.2248160859118844 0.9984909853547732 0.9775085970136056 0.9782546279706099 1.0181826881261327 1.0795394591466934 1.0 10.633526074033107 -7.281651018369045 24.52143708580443 1.0030377899161356 1.1463485065883126 0.5471695580470648 0.06635468798046441 331.5677720720427 402268.3065116699 0.008639533762760665 0.013822327170747729 5.228161343321395e-08 7.281651018369045 0.14331071667217699 KLPSDPQES(ph)TKKSPR ddPTM_A549_MK2206_60min_R1 1 KLPSDPQESTKKSPR 15 3 A0A075B6Q3;Q5H9F3-3;H7C4B2;Q5H9F3-2;Q5H9F3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 KLPSDPQES(0.355)T(0.355)KKS(0.29)PR 59.872 0.0010220000000000001 5462600.0 1175.6 1636.9 1468.0 1246.6 1772.7 1401.4 1190.6 1115.4 1714.6 1671.8 1802.1 True False 1374.0125393395047 1720.2112182348073 1676.1844741505658 1552.0170559619996 1511.9381782814912 1549.695217825967 1406.9166086239752 1273.5113657692389 1326.2458376535706 1294.1392188844734 1354.5888345702124 1.0143391885962614 1.2699139209873973 1.2374119964471657 1.1457477105622444 1.1161602249299531 1.1440336567646805 1.0386300054439512 0.9401460674030301 0.9790763099522856 0.9553741961080621 1.0 10.403639293921009 -7.8112892430254774 2.476670251510436 0.9858221861536244 1.1652100306491735 0.6471290636381437 0.06411319317533948 0.13215224109337528 1.6620928878783607 0.009813778378133473 0.014420749448346468 1.544225632395607e-08 7.8112892430254774 0.17938784449554912 KLPSDPQES(ph)TKKSPR ddPTM_A549_PD325901_60min_R1 1 KLPSDPQESTKKSPR 15 3 A0A075B6Q3;Q5H9F3-3;H7C4B2;Q5H9F3-2;Q5H9F3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 KLPSDPQES(0.365)T(0.365)KKS(0.269)PR 58.693000000000005 0.0014037000000000001 10345000.0 1805.4 1958.2 2080.8 2168.4 2341.8 2344.2 1837.7 2081.6 2021.4 2265.2 2474.9 True False 1988.682878934765 2123.224386303497 2222.0156008668787 2302.3371432062922 2177.3200467714223 2325.1096124170335 1907.6346791280255 2040.0808550163897 1936.4475876078538 2122.1748854185494 2170.502989683715 0.9162313474742347 0.9782176741497566 1.023733029361397 1.0607389872988786 1.0031407729545219 1.0712307808227657 0.8788906019456832 0.9399115618420179 0.8921653629650298 0.9777341452673106 1.0 11.083813694444265 -7.760263445138493 24.99998584913318 0.9421657884874596 1.0102594591634544 0.3325479082171141 0.04998604817771384 34.60224744347245 735620.8337206335 0.00884286856202484 0.012716964037275917 1.7367469900047138e-08 7.760263445138493 0.06809367067599481 KLPSDPQEST(ph)KKSPR ddPTM_A549_PD325901_60min_R1 2 KLPSDPQESTKKSPR 15 3 A0A075B6Q3;Q5H9F3-3;H7C4B2;Q5H9F3-2;Q5H9F3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 KLPS(0.001)DPQES(0.084)T(0.457)KKS(0.457)PR;KLPSDPQES(0.073)T(0.464)KKS(0.464)PR 63.918 0.0019098 12537900.0 2790.6 2747.6 2508.5 3102.2 3395.8 3747.7 3115.6 3441.8999999999996 3291.5 3301.5 3154.1 True False 3073.899657668858 2979.1498947030377 2678.7418948359114 3293.815848392621 3157.2907228740232 3717.1799737459746 3234.1658629217386 3373.2486043816843 3153.169701499578 3093.0427265624867 2766.165695487253 1.1112492873017856 1.0769961826810481 0.9683953131246023 1.190751462852056 1.141396094971771 1.3438023542155175 1.1691873224362463 1.2194672972356038 1.139906299410656 1.1181697219398332 1.0 11.433671862299457 -4.0466929582281415 16.053190833370486 1.1072359611961933 1.116702134973977 0.0 0.10154845778157881 0.0 0.0 0.015083216357345691 0.0 8.980634918466365e-05 4.0466929582281415 0.009466173777783693 KLPSDPQESTKKS(ph)PR ddPTM_A549_MK2206_60min_R1 1 KLPSDPQESTKKSPR 15 3 A0A075B6Q3;Q5H9F3-3;H7C4B2;Q5H9F3-2;Q5H9F3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 KLPSDPQES(0.045)T(0.183)KKS(0.772)PR 69.188 0.00040825 6951200.0 1237.0 1483.2 1261.1 1324.9 1699.9 1505.9 1216.1 1295.0 1933.7 2302.9 1797.0 True False 1445.7753582536302 1558.6885447405864 1439.9429430185814 1649.5005594770207 1449.846961843914 1665.253338464482 1437.0496285466293 1478.5702157711708 1495.7200374843742 1782.6732905664892 1350.7553053230522 1.0703458669058143 1.153938495446297 1.0660279751218145 1.2211690400005644 1.0733601830993087 1.2328312403453512 1.063885977633039 1.0946247702632934 1.1073212384138307 1.3197603470749557 1.0 10.399550633070687 -10.4643739734799 0.4552661855261313 0.9778332001499968 1.1301220350722194 0.0 0.1108566071332918 1.1148046573102248 0.34573577659532573 0.0760374395941685 0.014316122840028596 3.432622355101408e-11 10.4643739734799 0.15228883492222267 KLPSDPQESTKKS(ph)PR ddPTM_A549_PD325901_60min_R1 1 KLPSDPQESTKKSPR 15 3 A0A075B6Q3;Q5H9F3-3;H7C4B2;Q5H9F3-2;Q5H9F3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 KLPSDPQES(0.132)T(0.132)KKS(0.735)PR 86.455 1.0407e-05 9517200.0 1978.4 1731.7 1736.5 1820.4 2394.2 2316.9 1747.4 2168.1 2411.4 2185.4 2009.1 True False 2179.245711578897 1877.6364364016792 1854.349332422788 1932.8419735716352 2226.039651541608 2298.031934565747 1813.89826321397 2124.8555446584533 2310.057243869387 2047.4134710373025 1761.9934367342323 1.2368069404492341 1.065631912841733 1.0524155730453415 1.0969632084181098 1.2633643265252237 1.3042227551227634 1.029458013519018 1.2059383992920927 1.3110475871867968 1.1619870019675453 1.0 10.782992835022224 -4.831106359002752 9.048712520387728 1.1501040123275803 4.163362500464586 0.05399595192679085 0.10545635357565383 96104.70301238899 93444.59436081894 0.017977767802728275 5753720.201562309 1.475345176030544e-05 4.831106359002752 3.013258488137005 KLPVDSVFNKFEDEDS(ph)DDVPR ddPTM_A549_PD325901_60min_R1 1 KLPVDSVFNKFEDEDSDDVPR 21 2 P49756 P49756 RBM25 RNA-binding protein 25 1 KLPVDSVFNKFEDEDS(1)DDVPR 94.006 3.497e-07 7852900.0 4994.2 4987.7 5135.7 6041.8 5820.8 6118.3 5488.6 5733.3 5922.6 5449.6 6328.4 True False 5501.207507464279 5408.030983334671 5484.239485472907 6414.9882640766355 5411.967088669863 6068.4745933159 5697.471676477162 5618.944833813162 5673.693718396297 5105.511325965449 5550.046919032858 0.9912001804162964 0.9744117594373537 0.9881429050024287 1.155843969909087 0.9751209616103469 1.0934096020891626 1.02656279480066 1.0124139337532503 1.0222785142481257 0.9199041738650973 1.0 12.438284252443733 -6.032304906251974 24.999328374777072 1.0248717411051036 0.9824236655387911 0.09257344923514099 0.05742116821418669 934.1190216803548 722873.0247844465 0.0064098919344577855 0.016975440709536046 9.28314413835178e-07 6.032304906251974 -0.04244807556631247 KLQEES(ph)DLELAK ddPTM_A549_MK2206_60min_R1 1 KLQEESDLELAK 12 1 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 KLQEES(1)DLELAK 68.944 0.0016335999999999998 2752100.0 1489.5 1206.0 1419.4 1410.0 1792.9 1549.4 1547.4 1383.0 2289.3 2354.8 2345.7 True False 1740.8911852213262 1267.3802487575147 1620.6922633578429 1755.4500632973047 1529.1667850402685 1713.3564795915192 1828.5425501299685 1579.0444852598685 1770.7772052608889 1822.8490445203727 1763.1979519734464 0.9873486883720836 0.7187963480441936 0.9191777143025234 0.9956057749117336 0.8672689208428128 0.9717323444448523 1.0370602733989032 0.8955571230629745 1.0042985833093554 1.0338311943251535 1.0 10.783978737935458 -6.761351002508346 0.5903868638450976 0.9995719186526102 0.8508032019041236 0.25637191939572945 0.07720975216386274 0.9644153455596371 0.5396782556556554 0.014196359038518363 0.0712144285741226 1.7324032806904283e-07 6.761351002508346 -0.14876871674848657 KLQEES(ph)DLELAK ddPTM_A549_PD325901_60min_R1 1 KLQEESDLELAK 12 1 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 KLQEES(1)DLELAK 68.919 0.0016394000000000003 3511000.0 1830.5 1841.1 1746.1 1731.7 1901.9 2189.5 1948.0 2101.6 2145.7 1756.4 2500.3 True False 2016.3310124571226 1996.2559583410114 1864.6008461522756 1838.663176023952 1768.317105198806 2171.669437926412 2022.132205986501 2059.6819393266933 2055.523690872747 1645.5006042509017 2192.7789507075813 0.9195322728752384 0.9103771986213409 0.8503368958145978 0.838508220553029 0.8064274352087305 0.9903731688165113 0.922177862631336 0.9393021301404141 0.9374057928682032 0.7504179131781249 1.0 11.098544669044058 -7.27341556870798 24.976925230893496 0.9643821623881954 0.8652649091214807 0.0 0.07400459607956493 408.7751429584613 852519.2974075784 0.006263707914185847 0.01005982671652544 5.328248008488877e-08 7.27341556870798 -0.09911725326671472 KLQLEETMPS(ph)PYGR ddPTM_A549_PD325901_60min_R1 2 KLQLEETMPSPYGR 14 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KLQLEET(0.058)MPS(0.869)PY(0.073)GR;KLQLEET(0.026)MPS(0.878)PY(0.096)GR 59.434 0.0024607 14814000.0 3972.0 3698.6 4378.2 3712.1 4498.1 4539.8 4015.2 4584.4 3917.3 4476.1 4512.8 True False 4375.2345159681445 4010.29400223783 4675.33098025537 3941.3879862092213 4182.168973602584 4502.829373965891 4168.000633201745 4492.960545607773 3752.669503777698 4193.478282103994 3957.7542089961908 1.1054841419972463 1.0132751531467552 1.1813090791813419 0.9958647702907452 1.0567025521939402 1.1377233491990772 1.0531226582306836 1.1352298066906301 0.9481815457987957 1.059560058725221 1.0 11.950466303193776 -8.769855559888821 24.999999372104508 0.9755301697244 1.0824710712680534 0.2461313592507537 0.05905058226686741 113.22738327433085 336337.68213689706 0.008750785857091898 0.009391380267633032 1.6988085578598807e-09 8.769855559888821 0.10694090154365343 KLQLERPVS(ph)PETQADLQR ddPTM_A549_MK2206_60min_R1 6 KLQLERPVSPETQADLQR 18 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KLQLERPVS(0.986)PET(0.014)QADLQR;KLQLERPVS(1)PETQADLQR;KLQLERPVS(0.995)PET(0.005)QADLQR;KLQLERPVS(0.996)PET(0.004)QADLQR;KLQLERPVS(0.84)PET(0.16)QADLQR;KLQLERPVS(0.998)PET(0.002)QADLQR 163.95 9.2475e-24 154617400.0 10181.8 11666.699999999999 12361.6 10024.699999999999 15596.099999999999 11173.9 10231.7 10033.0 15256.1 15249.599999999999 14794.3 True False 11900.238918889905 12260.485197495273 14114.660759986127 12480.75195002589 13301.934350028747 12356.314681365478 12090.66744872999 11455.208474773868 11800.617708985554 11804.704768692836 11120.467008091733 1.0701204284164303 1.1025153160001295 1.269250720290406 1.1223226453479296 1.196166882231626 1.1111327134350104 1.0872445770426995 1.0301013857096615 1.0611620627442098 1.0615295886497593 1.0 13.4409297553906 -7.925726957126731 1.4272487383462864 1.028110803190542 1.1544265492288561 0.48654284717982743 0.051780103852060666 0.22640926226559321 0.9301821111139803 0.008975743504328601 0.013321970538493337 1.1865144806535955e-08 7.925726957126731 0.1263157460383142 KLQLERPVS(ph)PETQADLQR ddPTM_A549_PD325901_60min_R1 4 KLQLERPVSPETQADLQR 18 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KLQLERPVS(0.991)PET(0.009)QADLQR;KLQLERPVS(1)PETQADLQR;KLQLERPVS(1)PETQADLQR;KLQLERPVS(0.999)PET(0.001)QADLQR 265.41 5.641999999999999e-101 431300000.0 13720.7 14167.599999999999 14815.900000000001 14924.0 17143.9 16198.7 15699.400000000001 16389.8 15796.5 16477.5 16563.8 True False 15113.615363354507 15361.553373196515 15821.39606924432 15845.821585136831 15939.771607244242 16066.783157861879 16296.84925804131 16062.89258145063 15132.628038808467 15437.107837932264 14526.557606579296 1.0404127235560148 1.0574806357590898 1.0891359465699273 1.0908173852530638 1.0972848515759082 1.106028254800366 1.1218658748622057 1.1057604297232473 1.0417215453683724 1.06268176232892 1.0 13.82640524409548 -9.110452556634355 1.7888450979943673 1.0139602353742094 1.0893180817016173 0.3833263263447926 0.02743571527892462 0.15107807742942406 0.9927529521896374 0.005380579201953176 0.005112392537951424 7.754386495014152e-10 9.110452556634355 0.07535784632740783 KLQVYEGGGQPPPQDLPGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KLQVYEGGGQPPPQDLPGSPK 21 1 A0A494BYR6;Q86Y91-6;Q86Y91 A0A494BYR6 KIF18B Kinesin-like protein KIF18B 1 KLQVYEGGGQPPPQDLPGS(1)PK;KLQVYEGGGQPPPQDLPGS(1)PK 90.37 1.1277e-06 23173000.0 2500.06 3273.6 3471.1 2626.3 3959.5 3181.0 3140.0 3609.5 4741.0 4530.5 4854.9 True False 2922.0090074014292 3440.2122573238807 3963.354174539526 3269.7436178990856 3377.0627951179345 3517.611308623094 3710.49735518166 4121.157678630147 3667.1710698212855 3507.056903431099 3649.294341576451 0.8007052141864656 0.9427061605115006 1.0860604280079542 0.8959933926531659 0.9254015924785842 0.9639154804661573 1.016771191325381 1.1293026248055005 1.0048986808329392 0.9610233034576466 1.0 11.833401803906456 -7.624431539672328 3.8156702601064607 1.0148334294406456 0.938121592000737 0.25993680265299957 0.07329474801260862 0.2885864970178968 8.03589591586866 0.0110921138839384 0.016764107076778736 2.374479696074925e-08 7.624431539672328 -0.07671183743990861 KLQVYEGGGQPPPQDLPGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KLQVYEGGGQPPPQDLPGSPK 21 1 A0A494BYR6;Q86Y91-6;Q86Y91 A0A494BYR6 KIF18B Kinesin-like protein KIF18B 1 KLQVYEGGGQPPPQDLPGS(1)PK;KLQVYEGGGQPPPQDLPGS(1)PK 112.11 6.6319e-11 32832000.0 2925.9 2761.9 3092.2 3151.3 3941.0 3445.8999999999996 2840.7 3543.1 4145.8 3391.3 4073.8 True False 3222.9352140662622 2994.6550058888943 3302.0552869091503 3345.9486438784297 3664.197755711917 3417.8377328845027 2948.8043929906858 3472.430090991819 3971.5664434078535 3177.172739237123 3572.748425945904 0.9020884847812852 0.8381936394237004 0.9242339211261185 0.9365195208203254 1.025596352965099 0.9566410296520143 0.8253602105247515 0.9719212429776594 1.1116277918046693 0.8892797254248177 1.0 11.802818615204838 -8.54584942403783 8.1131254847872 1.0522841719248688 0.9180053670352133 0.11273315146160778 0.07476471586532488 0.12648488231240107 36.28771940981518 0.01102852390282851 0.012579154872852686 2.845447492826118e-09 8.54584942403783 -0.1342788048896555 KLRPVS(ph)PEEIRR ddPTM_A549_PD325901_60min_R1 2 KLRPVSPEEIRR 12 3 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8;K7EMJ7 J3KNG6 SPIRE1 Protein spire homolog 1 1 KLRPVS(1)PEEIRR;KLRPVS(1)PEEIRR 54.093999999999994 0.006282 78526000.0 4082.0 5006.9 4571.200000000001 5056.4 4849.6 4204.200000000001 4812.1 4975.4 4220.7 4793.1 5313.200000000001 True False 4496.401634990424 5428.849034717078 4881.429120858648 5368.722344082411 4508.980826211752 4169.962389098066 4995.227098782158 4876.161743874209 4043.3186568796204 4490.462848004435 4659.710083149829 0.9649530882296837 1.1650615462855864 1.0475821529134584 1.1521580201945332 0.9676526534380036 0.8948973894700529 1.0720038392185827 1.0464517441776258 0.867718932021293 0.9636785911300756 1.0 12.186024481040914 -6.857167452531257 7.336929896413911 0.9529214801344099 1.0854924404913207 0.3056155795891202 0.07550231627310179 0.18647292119346276 12.404981862835092 0.011742786980852946 0.022308776901638083 1.3894168053381954e-07 6.857167452531257 0.13257096035691074 KLS(ph)ASSPR ddPTM_A549_MK2206_60min_R1 1 KLSASSPR 8 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-4;Q15326-5;Q15326-2;Q15326-6;Q15326-3;Q15326 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KLS(0.994)AS(0.004)S(0.001)PR 63.408 0.0041431 3566900.0 1595.9 1825.2 1334.4 1471.4 2253.0 1640.8 1639.2 1623.2 2079.4 2677.8 2539.5 True False 1865.2489039910802 1918.0948839404775 1523.637985222421 1831.8930660536553 1921.5866845310532 1814.42836692511 1937.021421851521 1853.2935708415155 1608.419220119465 2072.8831201871308 1908.872063365549 0.977147153959833 1.004831555111487 0.7981875865143533 0.9596730452557563 1.0066608032091406 0.9505238207143518 1.014746592517228 0.9708841186422716 0.8426018961604201 1.0859204029275868 1.0 10.898504698177543 -4.422547463344783 16.241799668832567 0.9400044953023785 0.9509524416965909 0.0 0.08065236460319236 0.0 0.0 0.010052850978543526 0.0 3.7796582776767364e-05 4.422547463344783 0.010947946394212371 KLS(ph)ASSPR ddPTM_A549_PD325901_60min_R1 1 KLSASSPR 8 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-4;Q15326-5;Q15326-2;Q15326-6;Q15326-3;Q15326 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KLS(0.98)AS(0.019)S(0.002)PR 59.367 0.020624 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KLS(ph)ASYEK ddPTM_A549_MK2206_60min_R1 2 KLSASYEK 8 1 Q5T1W7;B7Z3H4;Q9Y297-2;Q9Y297 Q5T1W7 BTRC F-box/WD repeat-containing protein 1A 1 KLS(0.979)AS(0.021)YEK;KLS(0.962)AS(0.038)YEK 58.676 0.011342 4200500.0 3108.6 3591.9 3683.2 3683.3 3926.2 3588.0 3157.3999999999996 3314.6 4529.5 4041.1000000000004 4267.9 True False 3633.255682026867 3774.712367754659 4205.533143863327 4585.708665349622 3348.661181005692 3967.6797784783575 3731.0587099524087 3784.4547005367754 3503.5754821251867 3128.2127033341585 3208.062641952284 1.1325388832855923 1.1766329991167308 1.3109261299536303 1.4294323949232375 1.0438266189739505 1.2367837605763845 1.1630255161357612 1.1796698265946965 1.0921156701581944 0.9751096074079363 1.0 11.647486597387456 -8.885076022890203 0.5453160054350531 1.008801966378521 1.2376919661597439 0.46578550817689757 0.09363921295159944 0.47712408948711826 0.3263977015948973 0.03500547309921096 0.031047376268037618 1.3029386801493193e-09 8.885076022890203 0.22888999978122282 KLS(ph)ASYEK ddPTM_A549_PD325901_60min_R1 1 KLSASYEK 8 1 Q5T1W7;B7Z3H4;Q9Y297-2;Q9Y297 Q5T1W7 BTRC F-box/WD repeat-containing protein 1A 1 KLS(0.533)AS(0.423)Y(0.044)EK 51.286 0.01235 3880900.0 2421.5 1886.2 2495.0 2386.2 2529.7 2430.7 2708.0 2304.7 3544.2 3945.5 3890.2 True False 2667.328897385918 2045.1566936194758 2664.3257036538184 2533.5901545466027 2352.022598991231 2410.9051850960154 2811.054421874459 2258.7309504978257 3395.2495992874988 3696.3804566567574 3411.7300620096125 0.7818112362074684 0.599448566108075 0.7809309808304264 0.7426115514702359 0.6893929344474041 0.7066517987287421 0.8239381108066511 0.662048552917274 0.9951694704966177 1.0834328594213216 1.0 11.736287788995325 -8.769696998186086 24.98543589584576 0.9977189455690928 0.7234491694330182 0.8141558019173197 0.06404705399135777 45.968955968563 139089.86829367545 0.00928592378002802 0.009966685570953 1.6994289091831636e-09 8.769696998186086 -0.2742697761360746 KLS(ph)ASYEKEK ddPTM_A549_MK2206_60min_R1 1 KLSASYEKEK 10 2 Q5T1W7;B7Z3H4;Q9Y297-2;Q9Y297 Q5T1W7 BTRC F-box/WD repeat-containing protein 1A 1 KLS(0.995)AS(0.004)YEKEK 49.928999999999995 0.0057903 6402700.0 3641.3 4083.6 4554.0 3573.3 4406.3 2860.0 2655.0 2409.3 5062.0 5082.6 4651.5 True False 4255.862418762282 4291.437797534152 5199.8256779847925 4448.75866041153 3758.139106990315 3162.64330168565 3137.3791331233465 2750.8256531717993 3915.4650823529537 3934.4371299809945 3496.40417513087 1.217211227761729 1.2273860751163084 1.487192388960628 1.2723811200245503 1.0748583169306072 0.9045416786139355 0.897315921150882 0.7867584853998855 1.1198548240511692 1.1252809838078084 1.0 11.771656250894523 -6.7884332871031 3.777501889042136 1.0121512672632438 1.3132926536023597 0.6291635638024614 0.11592929636376229 0.1288698443787002 3.9240899581822473 0.018234704318030252 0.03720229711978271 1.6276713264856322e-07 6.7884332871031 0.3011413863391159 KLS(ph)CSLEDLRSESVDK ddPTM_A549_MK2206_60min_R1 1 KLSCSLEDLRSESVDK 16 2 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 KLS(0.552)CS(0.448)LEDLRSESVDK 81.57600000000001 7.829e-05 9187600.0 2595.5 2983.9 2443.6 2162.9 3473.9 2630.0 2412.1 2359.0 4085.4 4124.7 4534.9 True False 3033.556946117459 3135.7677647326286 2790.1392241378203 2692.8105970962706 2962.893911847503 2908.30485434729 2850.3473472718724 2693.39547413451 3160.063423043216 3192.9274052714377 3408.7591731271636 0.8899299692487523 0.9199147271691549 0.8185204886674856 0.7899679796463625 0.8692001286583623 0.8531857801145977 0.8361832568702677 0.7901395602739557 0.9270421471705799 0.9366831867861982 1.0 11.735030962166325 -9.158769354966747 1.7585768489253746 0.9763143246922789 0.8468053414316521 0.5536052972737213 0.04226250800516757 0.1473864976941651 0.9400212155642783 0.009114298598862992 0.00849358362287573 6.937941682718027e-10 9.158769354966747 -0.12950898326062676 KLS(ph)DASDER ddPTM_A549_MK2206_60min_R1 3 KLSDASDER 9 1 E7ER68;Q658Y4 E7ER68 FAM91A1 Protein FAM91A1 1 KLS(0.799)DAS(0.201)DER;KLS(0.956)DAS(0.044)DER;KLS(0.822)DAS(0.178)DER 118.87 0.00012865 192802000.0 10426.2 10783.5 9694.2 8787.5 14454.399999999998 11153.4 11160.6 12958.400000000001 13591.1 12622.199999999999 12967.5 True False 12185.887663883585 11332.334089947477 11068.98333059292 10940.437894485864 12328.1769076279 12333.645384972273 13188.33655485364 14795.292883435623 10512.737550526916 9770.836253501384 9747.311865206839 1.2501793142970294 1.1626112149338728 1.1355934316725627 1.1224056484268143 1.2647771075873229 1.2653381317363392 1.353022939784002 1.5178844268077254 1.078526848828165 1.002413423169368 1.0 13.250788688811546 -8.97569962849109 24.727860133377405 1.0346439817071493 1.2536124179848607 0.49436822555218274 0.10516653728514382 101.2675049281785 103050.14556431168 0.020051759589797387 0.020754024509081533 1.0575486897452047e-09 8.97569962849109 0.21896843627771134 KLS(ph)DHK ddPTM_A549_MK2206_60min_R1 1 KLSDHK 6 1 Q9ULF5-2;Q9ULF5 Q9ULF5-2 SLC39A10 Zinc transporter ZIP10 1 KLS(1)DHK 67.563 0.022816 34664000.0 9359.3 7124.5 4738.6 3995.2 9733.1 16397.0 16446.0 21283.0 11005.0 8822.8 9308.5 True False 10938.921027084234 7487.106618800101 5410.604733794193 4974.024179351346 8301.373883359605 18132.1196565523 19434.02531952788 24299.930426453917 8512.385071373814 6829.723352299281 6996.942548469464 1.5633858576525046 1.070054036736068 0.7732812862637736 0.7108853824216953 1.1864287616846987 2.5914346917881415 2.7775024855361927 3.472935536932395 1.2165863893274131 0.9761011048737622 1.0 12.772508930469611 -7.012397462131048 24.41650089358157 1.5490494765099867 1.0058417122593863 0.13816379575028737 0.8253550453480702 1069.3282671173909 2106023.1904377644 0.14385875358195815 0.25780804430703047 9.718573821269238e-08 7.012397462131048 -0.5432077642506004 KLS(ph)DHK ddPTM_A549_PD325901_60min_R1 2 KLSDHK 6 1 Q9ULF5-2;Q9ULF5 Q9ULF5-2 SLC39A10 Zinc transporter ZIP10 1 KLS(1)DHK;KLS(1)DHK 65.22399999999999 0.02409 58801000.0 27175.0 25729.0 22246.0 18832.5 23697.0 17517.0 15017.5 16448.199999999997 21034.0 26438.0 28509.0 True False 29933.785994822345 27897.27312593335 23755.74733606526 19995.740753289294 22032.604470211943 17374.347359742835 15588.999180391322 16120.127747636725 20150.014127705344 24768.70016806268 25002.573733440953 1.1972281859441491 1.1157760566313513 0.9501320779745142 0.799747296677101 0.8812134584666108 0.6949023546525788 0.6234957787382116 0.6447387344798047 0.8059175964254709 0.9906460203708762 1.0 14.60978899129096 -5.7995083062976684 2.2022084137285742 0.8442712733916728 1.1894776407131689 0.5421178920732856 0.12157262308820929 0.24652999147228202 2.274146973152991 0.02080452111512623 0.10846628626037645 1.5866885717236706e-06 5.7995083062976684 0.345206367321496 KLS(ph)EADNR ddPTM_A549_MK2206_60min_R1 2 KLSEADNR 8 1 C9JA28;Q9UNL2;Q9UNL2-2;C9J365 C9JA28 SSR3 Translocon-associated protein subunit gamma 1 KLS(1)EADNR;KLS(1)EADNR 69.346 0.0029741999999999998 21426100.0 5495.8 5248.8 5567.4 3793.8 5374.200000000001 3427.6 3647.6000000000004 4306.9 4791.5 5256.200000000001 5251.799999999999 True False 6423.356680590375 5515.941500562558 6356.941036366386 4723.281170310153 4583.662299159695 3790.30635694326 4310.321704700834 4917.41626432807 3706.2329004532153 4068.820769410557 3947.6331176937138 1.627141248714376 1.3972781502514806 1.6103170803471822 1.1964843311147386 1.161116588726351 0.9601465597080696 1.091874947897643 1.2456619239228905 0.9388493788446254 1.0306988132138388 1.0 11.946772200525565 -6.54106885740755 1.360380428930324 1.0016418573150974 1.5541637371823194 0.7821890420640099 0.10891622643805347 0.13627396939344882 0.48772251987852666 0.01662302542921558 0.05378141933030203 2.8769422392657095e-07 6.54106885740755 0.552521879867222 KLS(ph)EADNR ddPTM_A549_PD325901_60min_R1 1 KLSEADNR 8 1 C9JA28;Q9UNL2;Q9UNL2-2;C9J365 C9JA28 SSR3 Translocon-associated protein subunit gamma 1 KLS(1)EADNR 78.692 0.0056026 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KLS(ph)EADNRK ddPTM_A549_MK2206_60min_R1 4 KLSEADNRK 9 2 C9JA28;Q9UNL2;Q9UNL2-2;C9J365 C9JA28 SSR3 Translocon-associated protein subunit gamma 1 KLS(1)EADNRK;KLS(1)EADNRK;KLS(1)EADNRK;KLS(1)EADNRK 78.324 0.00037837 61830000.0 13636.800000000001 15242.500000000002 13975.0 10204.900000000001 15021.300000000001 10352.0 10987.1 10515.1 16434.2 15511.0 14652.2 True False 15938.358452249879 16018.278144018605 15956.865140500095 12705.100958115372 12811.686668595787 11447.441768898543 12983.313850674016 12005.647626143187 12711.879940024673 12007.054327142643 11013.654359852213 1.4471453281074047 1.4544017471993325 1.4488256684963021 1.1535772363103154 1.163254833499941 1.0393863285402893 1.1788379611767872 1.0900694023871915 1.1541927433607284 1.0901971257525245 1.0 13.427005617941903 -6.3389001657918485 2.405481237781863 1.0864337292356068 1.4613025611683126 0.8940119430697517 0.052280288858925196 0.08030690526428576 0.8991135633789586 0.00963546650847969 0.027321416965068287 4.5824721499262237e-07 6.3389001657918485 0.3748688319327058 KLS(ph)EADNRK ddPTM_A549_PD325901_60min_R1 4 KLSEADNRK 9 2 C9JA28;Q9UNL2;Q9UNL2-2;C9J365 C9JA28 SSR3 Translocon-associated protein subunit gamma 1 KLS(1)EADNRK;KLS(1)EADNRK;KLS(1)EADNRK;KLS(1)EADNRK 85.845 0.00025487 68545000.0 16171.300000000001 14671.699999999999 16247.7 16708.8 19600.199999999997 16512.3 16026.699999999999 16884.5 19419.5 22085.7 24114.5 True False 17812.998471318144 15908.135649335625 17350.36662735716 17740.86462756192 18223.54956901921 16377.829303435612 16636.60483864674 16547.725401865995 18603.365948130355 20691.205132830863 21148.56937441025 0.842279123280644 0.7522085947139505 0.820403797542499 0.8388683089376415 0.8616918358113476 0.7744178347710258 0.7866539123339954 0.7824512906243544 0.8796512718557885 0.9783737503240859 1.0 14.368272453000973 -9.662055576385722 0.7417736545040774 0.9875770457828638 0.806256836386175 0.7871993254756481 0.03540812849368546 0.18682355894708425 0.21914305667466283 0.014922142624100514 0.008413745316438834 2.1774311100637333e-10 9.662055576385722 -0.1813202093966888 KLS(ph)ELERPHK ddPTM_A549_PD325901_60min_R1 1 KLSELERPHK 10 2 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 KLS(1)ELERPHK 68.809 0.00080361 7234400.0 1481.3 1413.3 1751.1 1480.4 2205.2 2090.4 1647.6 1958.0 2140.4 2996.0 2885.4 True False 1631.6804855245762 1532.403750976781 1869.9401762197194 1571.8409457676605 2050.3143595270044 2073.376475469912 1710.3003196013142 1918.9461539787148 2050.4464314414995 2806.83204869944 2530.514092057614 0.6448019754744074 0.6055701312972146 0.738956634183069 0.6211547885471619 0.8102362938670106 0.819349902842867 0.675870695590805 0.7583226507220829 0.810288485599477 1.1091943955218782 1.0 11.305214793185772 -14.999999999872742 0.08575894482061723 1.987017989846581 0.4553230476074414 0.8066671165279626 0.06589650445954699 41.13504562376575 0.25890418335247267 7.450258392707654 0.6577342814851825 1.0000000002930229e-15 14.999999999872742 -1.5316949422391395 KLS(ph)GDQITLPTTVDYSSVPK ddPTM_A549_MK2206_60min_R1 2 KLSGDQITLPTTVDYSSVPK 20 1 E9PJ38;E9PND3;E9PN10;O00559;O00559-2 E9PJ38 EBAG9 Receptor-binding cancer antigen expressed on SiSo cells 1 KLS(0.997)GDQIT(0.003)LPTTVDYSSVPK;KLS(1)GDQITLPTTVDYSSVPK 151.47 7.198799999999999e-22 700430000.0 6880.700000000001 8039.4 7820.4 7793.700000000001 9378.0 7128.6 7685.3 7279.700000000001 11331.9 10175.8 10930.4 True False 8041.993943036173 8448.571120946244 8929.450314473483 9703.156849872494 7998.508622961475 7882.94372041829 9081.619529865482 8311.619768146244 8765.242743325838 7877.079712599968 8216.080016306674 0.9788115411577069 1.0282970837891232 1.086826113761181 1.180995904447666 0.9735188322273665 0.9594531339486471 1.1053470160759082 1.0116283862437987 1.0668399925425782 0.9587394106393945 1.0 13.004234516776654 KLS(ph)GDQITLPTTVDYSSVPK ddPTM_A549_PD325901_60min_R1 2 KLSGDQITLPTTVDYSSVPK 20 1 E9PJ38;E9PND3;E9PN10;O00559;O00559-2 E9PJ38 EBAG9 Receptor-binding cancer antigen expressed on SiSo cells 1 KLS(0.597)GDQIT(0.403)LPTTVDYSSVPK;KLS(0.922)GDQIT(0.078)LPTTVDYSSVPK 211.94 7.9385e-67 1182580000.0 32941.0 31304.0 32197.0 31581.0 39502.0 34566.0 36672.0 36807.0 37064.0 37917.0 40892.0 True False 36285.14607011747 33942.09794139756 34382.08203628936 33531.68664434511 36727.51579450196 34284.50595632077 38067.57302768841 36072.855510467096 35506.32897353194 35522.914149044314 35862.543235745456 1.0117839616558704 0.9464498297925028 0.9587184548032703 0.9350058199699262 1.0241191081477556 0.9559976193252295 1.0614855945226196 1.0058643993355165 0.990067233662936 0.9905296987871562 1.0 15.13019018185208 -6.763373821415575 24.99999996498869 0.9997491913558708 0.9615030359389233 0.29313632761859976 0.030151594987498375 50.3044005206644 650128.8634241341 0.004019281078655751 0.00788114316626643 1.7243530064807364e-07 6.763373821415575 -0.038246155416947536 KLS(ph)GDQPAAR ddPTM_A549_MK2206_60min_R1 6 KLSGDQPAAR 10 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR 115.12 3.7937e-05 2320709700.0 32646.399999999998 36640.1 33630.3 31847.0 41908.799999999996 30091.799999999996 30901.699999999997 32704.9 42233.1 44596.1 47606.4 True False 38156.31419215142 38504.924587479465 38399.58223503119 39649.51642966615 35744.07103625167 33276.094302679776 36516.138891916264 37340.91972955562 32667.370282402317 34521.81003666341 35784.417010201105 1.0662829628123927 1.0760249238237645 1.0730811186356501 1.1080106857228726 0.9988725267219546 0.9299046088467424 1.0204480593188527 1.0434966627767277 0.9128937401184932 0.9647162905245107 1.0 15.12704385540801 -6.8999004544796945 4.9494271649026125 0.9681406339816968 1.079409676120335 0.620686485444805 0.037058144589812436 0.11569649223765732 4.691119366252539 0.006466761735892846 0.012440069637835368 1.2592140057181818e-07 6.8999004544796945 0.11126904213863809 KLS(ph)GDQPAAR ddPTM_A549_PD325901_60min_R1 6 KLSGDQPAAR 10 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR 122.64 1.4575e-05 3424112300.0 36304.200000000004 37537.700000000004 34353.600000000006 37855.399999999994 39808.2 35917.5 37497.399999999994 38124.0 43165.8 43867.3 46451.5 True False 39989.77565826052 40701.13371756962 36685.04188097869 40193.64208214881 37012.209362834605 35624.99978840918 38924.384076364615 37363.586912300576 41351.691539113024 41097.51119155977 40738.25998031965 0.9816269933369586 0.999088663512679 0.9005058610431806 0.9866312920965711 0.9085368246143779 0.8744850616010441 0.9554748802518491 0.9171620714863779 1.0150578733379805 1.0088185212479295 1.0 15.314096740526454 -8.769174545087134 24.99795450253717 1.007110667323344 0.9398419168053924 0.39669512590706346 0.03707446213401198 124.31660920997074 401756.4383783094 0.006407648511705489 0.006884313999612922 1.7014745399774836e-09 8.769174545087134 -0.06726875051795167 KLS(ph)GDQPAART(ph)PR ddPTM_A549_PD325901_60min_R1 1 KLSGDQPAARTPR 13 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 KLS(1)GDQPAART(1)PR 44.788000000000004 0.02775 16603000.0 1881.8 2525.7 1606.1 2463.9 2290.2 2075.0 2053.1 2107.5 2418.6 2368.9 2664.4 True False 2072.838950692057 2738.549602944921 1715.0996042638865 2616.089507077099 2129.3442527610837 2058.1018879640565 2131.2318439994287 2065.4642591982333 2316.9546529080612 2219.3272497209973 2336.695691023188 0.8870812569455316 1.1719752869256885 0.7339850074841717 1.1195679082763108 0.9112629688758019 0.8807744610779243 0.9120707724959295 0.8839252227549629 0.9915517291400138 0.9497716190631578 1.0 11.190254148163346 -8.957887224477382 24.476849922722796 0.996272873658258 0.9408450172228047 0.02202722815205682 0.1135270598598168 271.6570213751514 157893.5220090674 0.01768186014027078 0.018806585990035107 1.1018253891652334e-09 8.957887224477382 -0.05542785643545334 KLS(ph)GLEQPQGALQTR ddPTM_A549_MK2206_60min_R1 2 KLSGLEQPQGALQTR 15 1 H0YFP2;E9PS41;Q6RFH5-2;Q6RFH5 H0YFP2 WDR74 WD repeat-containing protein 74 1 KLS(1)GLEQPQGALQTR;KLS(1)GLEQPQGALQTR 86.539 2.2956999999999997e-05 11159800.0 2941.8 3417.9 3765.1 3486.1000000000004 4080.4 3752.9 3289.4 3025.1000000000004 4435.7 4585.7 5510.1 True False 3438.303919895333 3591.85651096875 4299.047795384394 4340.1946564969785 3480.178565273196 4150.029387026596 3887.041401316736 3453.917188980206 3431.021032357365 3549.787185093033 4141.790098976377 0.8301492441022285 0.8672232114940978 1.0379685335688265 1.0479030932952484 0.8402595211508438 1.0019893060375646 0.9384930931863011 0.833918935156522 0.8283908528356677 0.8570659304947263 1.0 12.016038725994754 -8.03664624926768 24.836233051574762 0.9091715318363006 0.9420965259189821 0.061565868039860305 0.08292158127510713 2001.4414499231054 1356430.3432982457 0.015307834297826936 0.019765646637462185 9.190809209137793e-09 8.03664624926768 0.03292499408268146 KLS(ph)GLEQPQGALQTR ddPTM_A549_PD325901_60min_R1 2 KLSGLEQPQGALQTR 15 1 H0YFP2;E9PS41;Q6RFH5-2;Q6RFH5 H0YFP2 WDR74 WD repeat-containing protein 74 1 KLS(1)GLEQPQGALQTR;KLS(1)GLEQPQGALQTR 110.33 1.1675e-06 23283000.0 4979.6 5151.0 4983.4 4970.9 6178.7 6025.4 5755.0 6371.299999999999 6420.3 6085.700000000001 6658.4 True False 5485.125326212232 5585.0928474360735 5321.603491618608 5277.941203266998 5744.729427357836 5976.331140115001 5974.00967425684 6244.219423311838 6150.477118194664 5701.4478634079405 5839.45901107521 0.9393208028019474 0.95644011488792 0.9113178946072866 0.9038407827260662 0.9837776781140671 1.0234391796877413 1.0230416315837545 1.0693147107410041 1.0532614590717346 0.9763657648070626 1.0 12.511619003392171 -7.020838687061757 3.0950526273149834 1.0290549307419357 0.9288422079190555 0.7359562915716501 0.026794808508786707 0.0963029605400014 1.8816395675688364 0.004045745453140297 0.007700019098673365 9.531501332848656e-08 7.020838687061757 -0.10021272282288018 KLS(ph)GPK ddPTM_A549_MK2206_60min_R1 3 KLSGPK 6 1 I3L1R1;C9JQW8;J3KN07;I3NI31;I3L4A5;I3L2L1;Q9BT40 I3L1R1 INPP5K Inositol polyphosphate 5-phosphatase K 1 KLS(1)GPK;KLS(1)GPK;KLS(1)GPK 58.981 0.028297000000000003 21967100.0 11261.8 12390.1 9616.3 9176.0 14698.0 10832.3 11062.7 10835.7 13988.400000000001 13978.6 13647.2 True False 13162.516515425003 13020.703167604055 10980.035939219399 11424.120411926286 12535.943670322866 11978.566796101199 13072.649392091771 12371.693657939517 10820.049734884646 10820.824551440664 10258.223596441163 1.2831185040645257 1.2692941468073737 1.0703642629732355 1.1136548452589397 1.2220384506603952 1.1677038118234102 1.2743580084008896 1.2060269053046933 1.0547683654154696 1.0548438966757054 1.0 13.324493302454329 -8.839430691164821 3.778880238071254 1.0232544916119548 1.1982323215290638 0.5675386151322577 0.06392686015641563 0.11673759222650179 3.152881213839117 0.012000069085284608 0.012753133557563193 1.4473358142504116e-09 8.839430691164821 0.17497782991710897 KLS(ph)GPK ddPTM_A549_PD325901_60min_R1 1 KLSGPK 6 1 I3L1R1;C9JQW8;J3KN07;I3NI31;I3L4A5;I3L2L1;Q9BT40 I3L1R1 INPP5K Inositol polyphosphate 5-phosphatase K 1 KLS(1)GPK 51.346000000000004 0.039151 12673000.0 7252.9 7011.5 6625.9 6583.2 7190.2 6233.5 6632.8 5738.0 7424.7 8095.3 8135.2 True False 7989.209068697221 7602.38371186139 7075.573418773476 6989.829312468021 6685.1851568433985 6182.736442710341 6885.214833607428 5623.551088626078 7112.665679089754 7584.161376447457 7134.621973281728 1.1197802908991976 1.0655622316545112 0.9917236603804124 0.9797056296246757 0.937006218672634 0.8665822051769414 0.9650426973414571 0.7882058936949397 0.9969225707719067 1.063008160046769 1.0 12.800621275439527 -5.632519552579871 1.7646819119331154 0.9662127816120692 1.1275692448501706 0.37316106546254557 0.07012348842060927 0.42826145457998216 2.1272967007949943 0.010060571906966248 0.09058892074828757 2.3306681827920385e-06 5.632519552579871 0.16135646323810138 KLS(ph)LDTDAR ddPTM_A549_MK2206_60min_R1 2 KLSLDTDAR 9 1 Q9NWH9;Q9NWH9-3;H7C3F4;H0YMM0 Q9NWH9 SLTM SAFB-like transcription modulator 1 KLS(0.995)LDT(0.005)DAR;KLS(0.941)LDT(0.059)DAR 54.343 0.0083499 5967300.0 1681.3400000000001 1839.85 1940.8 1759.48 2833.8 1974.6599999999999 1779.79 1811.85 2850.8 3047.9 2818.2 True False 1965.1090871836361 1933.4905063652684 2216.0346235908837 2190.5526789860583 2416.9517739121598 2183.6172105267756 2103.154805025084 2068.685286057911 2205.0983517921377 2359.377273141518 2118.363161636853 0.9276544847320712 0.9127285355884238 1.0461070432694648 1.0340779705088077 1.1409525135645713 1.0308039953071602 0.9928207037928202 0.9765489334035832 1.0409444384825237 1.1137737456302979 1.0 11.048734223652326 -5.7573675638259845 24.999891694794336 1.026268959763231 0.9201914666717291 0.4596628397142817 0.04851634622152643 63.839571463763896 391941.43024867185 0.005906102668203099 0.021303637697281403 1.7483663376866577e-06 5.7573675638259845 -0.10607749309150194 KLS(ph)LDTDAR ddPTM_A549_PD325901_60min_R1 2 KLSLDTDAR 9 1 Q9NWH9;Q9NWH9-3;H7C3F4;H0YMM0 Q9NWH9 SLTM SAFB-like transcription modulator 1 KLS(0.986)LDT(0.014)DAR;KLS(0.777)LDT(0.223)DAR 77.91199999999999 0.00078419 15143800.0 3474.5 3199.3 3182.8 3236.7 3911.2 3561.7 3592.4 3606.0 3473.3 4045.6000000000004 4117.0 True False 3827.228682208287 3468.9162389443263 3398.8039477312095 3436.6236079209593 3636.490804907499 3532.694696077873 3729.110747836707 3534.0755011477268 3327.32927972611 3790.160125573585 3610.6350998132643 1.0599876687639314 0.9607496030611713 0.9413313319606819 0.9518058493639237 1.0071609853611547 0.978413658101473 1.0328129663475465 0.9787960853010328 0.92153573754883 1.049721176689831 1.0 11.818036909797543 KLS(ph)LGQYDNDAGGQLPFSK ddPTM_A549_MK2206_60min_R1 2 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 KLS(1)LGQYDNDAGGQLPFSK;KLS(1)LGQYDNDAGGQLPFSK 219.95 1.9944e-67 681910000.0 32455.8 36559.0 36991.0 33534.0 52485.0 40208.0 38910.0 39674.0 58454.0 59438.0 53150.0 True False 37933.54557187399 38419.69694388558 42236.88002949835 41749.83150539848 44764.526026459076 44462.78387208968 45979.443340802005 45297.910996529274 45214.262331856844 46010.91451851619 39951.38813462449 0.9494925544025915 0.9616611271283602 1.0572068206284204 1.0450157918096303 1.120474859987736 1.1129221273179073 1.1508847498831514 1.1338257094819475 1.1317319483242487 1.1516724866598596 1.0 15.285958010866574 -5.79823262936552 1.8630054307729071 1.0820805630655708 0.9410725992827983 0.5568078519963345 0.04802779177046723 0.309601099487718 1.9457798723247317 0.008688192018414117 0.05262809526071433 1.5913560905605332e-06 5.79823262936552 -0.14100796378277247 KLS(ph)LGQYDNDAGGQLPFSK ddPTM_A549_PD325901_60min_R1 2 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 KLS(1)LGQYDNDAGGQLPFSK;KLS(1)LGQYDNDAGGQLPFSK 232.46 9.396999999999998e-76 1244990000.0 20789.1 20489.5 21530.0 21562.0 26377.0 24747.0 22184.0 25083.0 26705.0 29719.0 31226.0 True False 22899.59412787346 22216.222072906494 22991.1552704075 22893.83576914502 24524.370515710052 24545.468636841706 23028.22425955059 24582.69988776716 25582.681719139055 27842.537268123728 27385.399957923004 0.8361971767094191 0.8112432941290313 0.8395406057874943 0.83598690558914 0.8955271989231907 0.8962976138583046 0.8408942098685026 0.897657143059363 0.9341722873664879 1.0166927381343016 1.0 14.741119330323 -8.770973113804974 0.2554568092723937 1.0285739597554588 0.8007415080023113 0.8880140400129228 0.021917326550866107 0.39924397844531995 0.0928141423560778 0.03219726361959423 0.028897912370759875 1.6944426963383705e-09 8.770973113804974 -0.2278324517531476 KLS(ph)LPTDLKPDLDVK ddPTM_A549_MK2206_60min_R1 2 KLSLPTDLKPDLDVK 15 2 H0Y332;Q5JRH0;Q5T5C0-2;Q5T5C0 H0Y332 STXBP5 Syntaxin-binding protein 5 1 KLS(0.968)LPT(0.032)DLKPDLDVK;KLS(0.954)LPT(0.046)DLKPDLDVK 94.85600000000001 4.3225e-06 9923500.0 2644.2 2876.5 2571.4 2005.13 2843.3 2398.8 2018.1599999999999 2464.9 3125.5 3160.1000000000004 3173.2 True False 3090.4763155167707 3022.9015634751177 2936.0631858520196 2496.3869400137055 2425.0543364967357 2652.6394238054318 2384.8335485138273 2814.3071234396602 2417.5792403978962 2446.2312152152344 2385.2068641352867 1.2956848154288565 1.2673540433445867 1.2309469799033284 1.0466123410720292 1.0167060865707742 1.1121213273747215 0.999843487109201 1.1799006475104774 1.0135721461938463 1.0255845109275548 1.0 11.219898678322691 -2.4213453263083644 0.3113422842398933 1.0050310864674656 3.3657091774095087 0.6756931339895882 0.06240596640457197 13.815644661229868 0.22073408685512938 0.019072742448699918 17.874490776656266 0.0037901349511867285 2.4213453263083644 2.3606780909420433 KLS(ph)LPTDLKPDLDVK ddPTM_A549_PD325901_60min_R1 2 KLSLPTDLKPDLDVK 15 2 H0Y332;Q5JRH0;Q5T5C0-2;Q5T5C0 H0Y332 STXBP5 Syntaxin-binding protein 5 1 KLS(0.987)LPT(0.013)DLKPDLDVK;KLS(0.956)LPT(0.044)DLKPDLDVK 148.38 1.7508e-14 13258200.0 4283.9 6079.200000000001 5213.0 4301.7 6471.2 5811.200000000001 5771.700000000001 5731.3 6098.3 6030.0 6340.6 True False 4718.7983743595005 6591.515518954258 5566.78552831557 4567.40623913047 6016.685236428058 5763.875513897218 5991.345201895428 5616.98472538213 5842.0096584095 5649.264770913765 5560.74639637503 0.8485908254035136 1.18536524579707 1.0010860290166221 0.821365678914596 1.081992381517389 1.0365291101307201 1.077435433092417 1.0101134497059174 1.050580127555866 1.015918434006708 1.0 12.441062827696628 KLS(ph)LQER ddPTM_A549_MK2206_60min_R1 1 KLSLQER 7 1 J3KPJ3;Q8N5S9;Q8N5S9-2;F5H4I7;Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4 J3KPJ3;Q96RR4-6 CAMKK1;CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 1;Calcium/calmodulin-dependent protein kinase kinase 2 1 KLS(1)LQER 64.73 0.010689 12284000.0 1458.7 1512.5 1725.7 1635.4 2325.5 1165.6 1285.5 1266.1 2237.6 2123.1 1746.1 True False 1704.8928982090304 1589.479789590168 1970.4302091564252 2036.073073415896 1983.4220305712233 1288.9430183373402 1519.0587102184788 1445.5735522686318 1730.7871727129536 1643.490235443012 1312.4951800915862 1.298970787908008 1.2110366679436138 1.5012856725454247 1.5512994670759996 1.5111842394977935 0.9820554299082435 1.1573823151963716 1.1013934178164062 1.3186998314098028 1.2521876349506509 1.0 10.358096409406002 -7.253410036208785 24.959447417110415 1.139955544951845 1.4158306869977675 0.5401849231261183 0.12834605397022256 447.23537858339637 1390243.311241784 0.022736229323887917 0.038933124910708335 5.579431676991407e-08 7.253410036208785 0.27587514204592245 KLS(ph)LQER ddPTM_A549_PD325901_60min_R1 2 KLSLQER 7 1 J3KPJ3;Q8N5S9;Q8N5S9-2;F5H4I7;Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4 J3KPJ3;Q96RR4-6 CAMKK1;CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 1;Calcium/calmodulin-dependent protein kinase kinase 2 1 KLS(1)LQER;KLS(1)LQER 67.113 0.0099399 22317200.0 4255.8 3934.0 3510.2 3282.6 4662.5 4366.1 6262.6 5471.0 5052.0 4245.2 4944.4 True False 4687.845683045627 4265.531986374201 3748.4232805473453 3485.3587466744957 4335.022084751793 4330.543929175844 6500.926670026214 5361.876613083528 4839.682008803245 3977.157347509638 4336.270145134011 1.0810778678782595 0.9836868653492011 0.8644349072102152 0.8037688220568144 0.9997121811279175 0.9986794605117966 1.4991978018992416 1.236518121247684 1.1160932891217912 0.9171839425116641 1.0 12.082238922558853 -7.534636999737308 24.993820951438703 1.1093743805490532 0.9424161412710791 0.272490280898522 0.15567747230809797 286.28382552852554 608534.6297068563 0.024972486268681513 0.03705547841066992 2.919866532640908e-08 7.534636999737308 -0.16695823927797415 KLS(ph)LRPTVAELQAR ddPTM_A549_MK2206_60min_R1 3 KLSLRPTVAELQAR 14 2 J3KP75;O75167-5;O75167-2;O75167;O75167-4 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 KLS(0.982)LRPT(0.018)VAELQAR;KLS(0.983)LRPT(0.017)VAELQAR;KLS(1)LRPTVAELQAR 74.51899999999999 0.00018873 31757400.0 6527.0 8358.2 6576.3 8253.7 9191.3 6864.700000000001 6553.1 6138.0 11039.6 9366.599999999999 8086.9 True False 7628.59803017093 8783.596679241347 7508.918227081989 10275.856870522679 7839.2719456414825 7591.117997580931 7743.713445299663 7008.080296836639 8539.148226618658 7250.678554613777 6078.6995429142935 1.254972050570141 1.4449795745341696 1.2352836612618643 1.6904696140971223 1.289629778589636 1.2488062527172619 1.273909557567492 1.1528913787169641 1.404765635533412 1.1928009442522314 1.0 12.569546995886176 -13.362269433148905 0.30900249594296963 2.025212434209121e-13 1.3655264637608069 0.23176284804407143 0.1485784542785456 11.409866546990305 0.3708116109225976 7.130228034726022 0.049262041902853625 4.342407407791424e-14 13.362269433148905 1.3655264637606044 KLS(ph)LRPTVAELQAR ddPTM_A549_PD325901_60min_R1 4 KLSLRPTVAELQAR 14 2 J3KP75;O75167-5;O75167-2;O75167;O75167-4 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 KLS(0.821)LRPT(0.179)VAELQAR;KLS(1)LRPTVAELQAR;KLS(1)LRPTVAELQAR;KLS(0.982)LRPT(0.018)VAELQAR 89.507 1.4870999999999999e-05 57665000.0 11839.2 16994.2 15032.400000000001 20766.8 18025.3 18290.9 16257.3 17784.9 23206.0 18748.4 18406.7 True False 13041.106868441606 18426.360875150083 16052.589061164581 22049.51807117524 16759.265111909168 18141.944974728573 16875.98044783591 17430.16621751585 22230.732521038804 17564.622824378046 16142.79258968492 0.8078594082150781 1.1414605479676634 0.9944121484545383 1.3659048116163406 1.0381887160353016 1.1238417934156628 1.0454188985008388 1.0797491277100066 1.377130530391874 1.0880783313539977 1.0 13.97860255585955 -4.724894889677843 1.362590298261886 1.1581696795969847 4.612394927509748e-10 0.307662571740119 0.12878376768929783 4.8262520007672824 2.818699215770445 0.022298562003058853 11.058676610613183 1.884105035701962e-05 4.724894889677843 -1.1581696791357452 KLS(ph)LSEGK ddPTM_A549_MK2206_60min_R1 2 KLSLSEGK 8 1 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 KLS(0.5)LS(0.5)EGK;KLS(0.918)LS(0.082)EGK 74.944 0.0020625 27052000.0 4959.6 5900.9 6184.700000000001 5710.0 8050.4 6477.4 6505.6 6519.2 9186.2 8902.0 8863.1 True False 5796.65922942175 6201.23060521826 7061.783458636921 7108.950256331642 6866.19682430039 7162.834168649863 7687.583310149618 7443.316564212675 7105.54036734704 6891.03201729249 6662.147660884112 0.8700886747761598 0.9308155449072282 1.0599860312462324 1.0670658499616978 1.0306281358208742 1.0751539193142572 1.1539196819797632 1.1172548167785425 1.0665540196693999 1.0343559416661148 1.0 12.701771615147544 -5.639236593761969 3.3552654594144316 1.0527343910808087 0.8796596073607144 0.6999562076935315 0.04191970274558296 0.12558292395107168 2.6495938328327147 0.00718324741330257 0.035291532218821 2.2948980991879382e-06 5.639236593761969 -0.17307478372009433 KLS(ph)LSEGK ddPTM_A549_PD325901_60min_R1 3 KLSLSEGK 8 1 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 KLS(0.5)LS(0.5)EGK;KLS(0.961)LS(0.039)EGK;KLS(0.711)LS(0.289)EGK 91.961 0.0010862 60858000.0 11874.8 13144.900000000001 12839.8 12629.0 14538.0 14442.900000000001 12690.9 14220.8 13984.6 14900.7 15563.900000000001 True False 13080.320954234277 14252.66685503056 13711.186039989698 13409.064647459993 13516.901033377273 14325.281810928238 13173.859144226939 13937.154987998221 13396.87589475649 13959.867259030625 13649.638967690968 0.9582906174438548 1.0441790357068765 1.004509062286879 0.9823750415083929 0.9902753519981087 1.0494989534035686 0.9651434133466672 1.0210640018382766 0.9814820689739285 1.0227279484881597 1.0 13.736575171983212 -8.794896110452424 24.99364627696687 0.9912554257687908 1.0027329428977405 0.0 0.02917697866696452 534.8589210922935 399559.5289321377 0.004441740758688217 0.0047287424784252146 1.6036289561477215e-09 8.794896110452424 0.011477517128949732 KLS(ph)NPDIFSSTGK ddPTM_A549_MK2206_60min_R1 2 KLSNPDIFSSTGK 13 1 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 KLS(0.999)NPDIFS(0.001)STGK;KLS(0.991)NPDIFS(0.009)STGK 127.91 2.2389e-08 41322000.0 6621.2 9132.400000000001 8289.099999999999 8004.7 10568.0 8680.1 7632.2 8262.5 11532.6 10836.5 12753.8 True False 7738.69668720205 9597.200152365787 9464.619022262566 9965.851859344633 9013.461199344953 9598.622420615939 9018.871947203017 9433.734677845014 8920.484513777892 8388.527123723892 9586.679473026796 0.8072343201810123 1.0010974268377901 0.9872677029509894 1.039552004151665 0.9402067968064796 1.0012457856364914 0.9407711995147674 0.9840461136087725 0.9305082681523547 0.8750190456795766 1.0 13.226815481830112 -5.255661064041049 24.831879185065176 0.9738249929647816 0.8072342408851678 0.5367869919223383 0.04332512038168331 267.2569718286029 1148480.1186788294 0.004708125959876019 0.057744072144539235 5.550587278322125e-06 5.255661064041049 -0.16659075207961382 KLS(ph)NPDIFSSTGK ddPTM_A549_PD325901_60min_R1 2 KLSNPDIFSSTGK 13 1 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 KLS(1)NPDIFSSTGK;KLS(0.996)NPDIFS(0.004)STGK 163.45 3.4205e-19 90615000.0 12008.3 12792.9 14172.7 13329.0 17283.8 16115.4 14183.1 17690.1 17859.7 15340.4 15124.1 True False 13227.373775956768 13871.002579686463 15134.544649368518 14152.302057644645 16069.845513873046 15984.161525443844 14722.84563179012 17337.257077885024 17109.11891777975 14371.804525990965 13263.931579569056 0.9972438184415396 1.0457685563647283 1.1410300602485646 1.066976406862953 1.2115446628679876 1.2050847389822836 1.1099910719132693 1.3070978973225607 1.2898980076264555 1.0835252307941943 1.0 13.695220849542267 -5.541447077175883 1.0689316535286555 1.1580318708492565 0.95443817563545 0.27646920769049155 0.08788237523076504 1.661195696832423 2.0301857057101897 0.01768987538198193 0.3398696534998229 2.8744378492747702e-06 5.541447077175883 -0.20359369521380655 KLS(ph)PENTTLK ddPTM_A549_MK2206_60min_R1 2 KLSPENTTLK 10 1 H0Y3T7;A0A590UJV1;A0A590UJ07;Q5T890 H0Y3T7 ERCC6L2 DNA excision repair protein ERCC-6-like 2 1 KLS(0.997)PENT(0.002)T(0.001)LK;KLS(1)PENTTLK 101.53 0.00017673 10384800.0 5846.9 7088.5 7657.1 7373.3 9225.7 6588.299999999999 6912.4 6747.9 11245.3 8882.099999999999 10409.900000000001 True False 6833.713777019519 7449.2743725685295 8742.991918949792 9179.758831000017 7868.6117512108885 7285.469533040405 8168.293604445123 7704.435489577053 8698.257505054056 6875.627441113637 7824.834531375876 0.8733365222763267 0.9520040765972198 1.1173388886234341 1.1731569267300401 1.0055946511915972 0.9310701081060901 1.0438934614773068 0.9846132156129245 1.1116219097254958 0.8786930143434821 1.0 12.933844528938973 -8.727395867905763 24.98667270367803 1.0527104410268338 1.0155360721870066 0.0 0.09769614500930515 579.6523321218751 425442.85250755947 0.015366076703471274 0.017423060913960314 1.8732861926382674e-09 8.727395867905763 -0.037174368839827165 KLS(ph)PENTTLK ddPTM_A549_PD325901_60min_R1 1 KLSPENTTLK 10 1 H0Y3T7;A0A590UJV1;A0A590UJ07;Q5T890 H0Y3T7 ERCC6L2 DNA excision repair protein ERCC-6-like 2 1 KLS(1)PENTTLK 102.73 0.00016346 10670000.0 3344.9 3849.1 3398.1 3337.1 4227.0 3852.1 3483.0 4266.8 4060.9 3787.5 3964.0 True False 3684.471785614765 4173.477165417624 3628.7155004352853 3543.225087896015 3930.110102358353 3820.7297747596854 3615.5474709707305 4181.695326760156 3890.2344951601526 3548.356603621205 3476.453129866355 1.0598364620426817 1.200498614396123 1.043798194562394 1.0192069202532947 1.1304942007112397 1.0990310043117324 1.0400104174882756 1.2028625643863957 1.1190240022910087 1.020682998179128 1.0 11.763400423662763 -10.710280538179422 1.0238760010327612 1.0013583592293676 1.1024297518430506 0.2650720696365215 0.0582015050447135 0.5107029135515812 0.9714122254659806 0.03604272332423202 0.009922741705170976 1.948585478948978e-11 10.710280538179422 0.10107139261368303 KLS(ph)PIIEDSR ddPTM_A549_MK2206_60min_R1 2 KLSPIIEDSR 10 1 O60566;O60566-3 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 KLS(0.774)PIIEDS(0.226)R;KLS(1)PIIEDSR 114.7 3.9211999999999997e-05 64631000.0 2059.8599999999997 2329.09 2316.1499999999996 2133.77 2936.32 1882.25 2442.61 2123.13 3304.61 3133.7599999999998 3195.0 True False 2407.5140092581405 2447.6307326522724 2644.6148976865334 2656.5437457885755 2504.391217719584 2081.42844566357 2886.4006193440378 2424.0901793129315 2556.1211113777927 2425.841439509157 2401.5933224858945 1.0024653161369208 1.0191695278860637 1.1011918100059865 1.1061588658311146 1.0428040394146678 0.866686472757627 1.2018690226687998 1.0093674714267402 1.0643438618208456 1.0100966790656145 1.0 11.229776155395102 -6.994757870870665 24.95812907201354 1.0302537094558373 1.0597675483617723 0.032581717868898186 0.07858168405698493 493.31290060034576 2348662.844252843 0.010900241438011103 0.020547995523196902 1.012143590239637e-07 6.994757870870665 0.029513838905935064 KLS(ph)PIIEDSR ddPTM_A549_PD325901_60min_R1 4 KLSPIIEDSR 10 1 O60566;O60566-3 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 KLS(0.999)PIIEDS(0.001)R;KLS(0.998)PIIEDS(0.002)R;KLS(0.927)PIIEDS(0.073)R;KLS(0.992)PIIEDS(0.008)R 98.25299999999999 0.00020844 169409600.0 10530.0 11632.900000000001 11644.5 13161.2 14568.0 12526.2 12746.5 14078.500000000002 12948.5 13190.7 15322.099999999999 True False 11598.997848223704 12613.245308666099 12434.765794066889 13974.1374327461 13544.793936871656 12424.190780248367 13231.57503265243 13797.693273130404 12404.319574621695 12357.83695086105 13437.578834794478 0.8631761711559183 0.9386546091179835 0.9253724906058997 1.0399297079145158 1.0079787514845726 0.9245855174503532 0.9846695744319183 1.0267990567916496 0.9231067387305426 0.9196475870238165 1.0 13.7139855981945 -5.316238033650608 1.525331952364297 0.9726994367742787 0.8321120912083125 0.3833820851734102 0.041437531140030175 0.8376791058080679 1.9232904063961653 0.006067423681698759 0.17048027138737118 4.827941135630872e-06 5.316238033650608 -0.1405873455659662 KLS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 KLSPLR 6 1 Q8IZD2-6;Q8IZD2-5;Q8IZD2-7;Q8IZD2;Q8IZD2-8;Q8IZD2-3;Q8IZD2-4 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 KLS(1)PLR 48.423 0.043306 33307000.0 4681.2 4986.1 5711.2 5240.7 6803.6 5082.0 5547.2 4426.6 7389.0 7677.6 7018.2 True False 5471.272115648253 5239.871192644981 6521.134038670783 6524.671735263964 5802.799452674424 5619.7738668414195 6555.054435880162 5054.084105893947 5715.403297808371 5943.224827675226 5275.387247533803 1.0371318462366956 0.9932675928377722 1.2361431934156788 1.2368137975679778 1.099976016999924 1.065281770446068 1.2425731284361337 0.958049877429697 1.0834092417538204 1.1265949870227312 1.0 12.365061285513331 -8.275638950451077 24.996913781385192 1.0343879023458884 1.1294247899502212 0.18575332589050886 0.08825446806650895 941.112827461624 1656730.3755050744 0.014252410171068305 0.0172710095209989 5.301039612566011e-09 8.275638950451077 0.09503688760433282 KLS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 KLSPLR 6 1 Q8IZD2-6;Q8IZD2-5;Q8IZD2-7;Q8IZD2;Q8IZD2-8;Q8IZD2-3;Q8IZD2-4 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 KLS(1)PLR 45.68 0.048748 54366000.0 3597.1 3139.1 3399.2 3860.5 3515.6 4219.7 3779.9 3722.5 3446.5 4052.1 3710.8 True False 3962.274943954938 3403.6429736724062 3629.8901530501216 4098.954317168366 3268.6763841615875 4185.336162237075 3923.7461629406434 3648.2518172552427 3301.655590526599 3796.2497144642857 3254.3951246993124 1.2175150195755746 1.04586039594282 1.1153808968987755 1.2595134149689602 1.0043882991815858 1.2860565487184892 1.2056760204565435 1.1210230096421745 1.0145220429654045 1.166499324452816 1.0 11.66817370771848 -8.699697077959346 3.5290689375450572 1.0060693442950635 1.1585449233131102 0.11757539228321312 0.0936075776968581 0.1561411299391171 3.9033226677701944 0.013198817493065522 0.014705972363846742 1.9966545034378965e-09 8.699697077959346 0.15247557901804676 KLS(ph)PPPLPPR ddPTM_A549_MK2206_60min_R1 2 KLSPPPLPPR 10 1 F5GWN5;O00750 F5GWN5 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta 1 KLS(1)PPPLPPR;KLS(1)PPPLPPR 62.924 0.002841 10400500.0 3383.5 4266.3 4124.1 3632.7 5270.4 3787.7 4290.1 3727.2 6052.3 5838.1 5605.9 True False 3954.552081367144 4483.436447159358 4708.9593936269375 4522.711663078098 4495.131141656665 4188.511899928229 5069.555638046125 4255.542014071277 4681.463713537096 4519.269155263457 4213.800315030884 0.9384763837197065 1.063988825281223 1.1175089091976642 1.0733094415853803 1.0667641571961197 0.9939986678978474 1.2030839762298913 1.0099059509041037 1.1109837589688405 1.0724924812272063 1.0 12.040906233525304 KLS(ph)PPPLPPR ddPTM_A549_PD325901_60min_R1 4 KLSPPPLPPR 10 1 F5GWN5;O00750 F5GWN5 PIK3C2B Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta 1 KLS(1)PPPLPPR;KLS(1)PPPLPPR;KLS(1)PPPLPPR;KLS(1)PPPLPPR 55.261 0.0073357 16469600.0 6934.6 7133.6 7511.3 7352.0 9008.0 8398.9 8334.0 8221.0 9961.1 8936.400000000001 9655.400000000001 True False 7638.595487017296 7734.773507371375 8021.061987116197 7806.116342396544 8375.309155912955 8330.502143046415 8651.154930539782 8057.025705750261 9542.469607658342 8372.154178904431 8467.847010623515 0.9020705590729422 0.9134285843458855 0.9472374709950718 0.9218537288880181 0.9890718556210966 0.9837804264289624 1.0216475238258669 0.9514845622083337 1.1269062366958966 0.988699272483427 1.0 13.04777948893808 -7.369559426168277 0.7667795224225131 1.0546087990692463 0.9142090258201214 0.4163909370638569 0.045811403681471304 0.3891043745096822 0.4508902490136655 0.010292133341927844 0.02504650865047418 4.27012485697983e-08 7.369559426168277 -0.1403997732491249 KLS(ph)PTEPK ddPTM_A549_MK2206_60min_R1 8 KLSPTEPK 8 1 O14828;O14828-2 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 1 KLS(0.958)PT(0.042)EPK;KLS(0.981)PT(0.019)EPK;KLS(0.983)PT(0.017)EPK;KLS(0.787)PT(0.213)EPK;KLS(0.876)PT(0.124)EPK;KLS(0.992)PT(0.008)EPK;KLS(0.881)PT(0.119)EPK;KLS(0.695)PT(0.305)EPK 125.97 0.00045417 1294557400.0 52452.200000000004 60117.5 55160.9 50354.200000000004 71662.2 55056.200000000004 53629.0 55905.700000000004 76260.1 74446.5 79119.09999999999 True False 61304.849026831864 63177.22396739626 62983.545068236985 62690.981260485976 61120.7853103423 60882.21054065221 63372.69511497997 63830.50417902575 58987.30911235573 57628.98394466022 59471.64389392608 1.0308248606037442 1.062308351187996 1.0590516916023838 1.0541323083703877 1.027729877777679 1.0237183059752313 1.0655951469579659 1.073293085573255 0.9918560384435613 0.9690161591538913 1.0 15.859914334275448 -8.774837912456936 24.999037088603764 0.9961542345029948 1.0494165520863066 0.7119499837316872 0.017475211316650467 89.98871524254274 167900.6721844986 0.0027812281231369205 0.0029689304401880334 1.6794306989010141e-09 8.774837912456936 0.05326231758331179 KLS(ph)PTEPK ddPTM_A549_PD325901_60min_R1 4 KLSPTEPK 8 1 O14828;O14828-2 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 1 KLS(0.995)PT(0.005)EPK;KLS(0.76)PT(0.24)EPK;KLS(0.985)PT(0.015)EPK;KLS(0.991)PT(0.009)EPK 135.99 0.000446 2631267000.0 40268.7 38557.600000000006 38229.100000000006 39919.100000000006 44866.2 42525.1 44021.3 43915.5 40813.1 40515.4 46358.2 True False 44356.74877974989 41806.98426990899 40823.55661625334 42384.81214414606 41714.952891987334 42178.78968475199 45696.554660879665 43039.570901456704 39097.86733837839 37957.25072959858 40656.435288842185 1.091014213730716 1.0282993079174987 1.0041105750227202 1.0425117658010272 1.0260356717362196 1.0374443648365699 1.1239685510111777 1.0586164427767368 0.9616649138225964 0.9336099060316688 1.0 15.311196106375968 -8.75547835698572 24.99951486225638 0.98189731942454 1.0499457690945082 0.5302750687494355 0.03524277106895831 95.14807226685743 399033.535379194 0.00588120753437126 0.006584390526694766 1.7559884014935382e-09 8.75547835698572 0.06804844966996826 KLS(ph)PVHSEMADYINATPSTLLGSR ddPTM_A549_MK2206_60min_R1 1 KLSPVHSEMADYINATPSTLLGSR 24 1 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 KLS(0.726)PVHS(0.27)EMADY(0.005)INATPSTLLGSR 57.78 0.00049846 2231300.0 1088.1 1059.9 1049.7 909.03 1457.0 1334.4 1022.3 1455.3 1580.8 1716.7 1299.4 True False 1271.7446785091147 1113.8443828010702 1198.563244220606 1131.742390807907 1242.677230076229 1475.6053222969679 1208.038677134462 1661.5932316693322 1222.7513240188762 1328.8962777000695 976.7231183844041 1.3020523980354897 1.1403890845170923 1.2271269325570457 1.1587136308188548 1.272292225591772 1.5107713685919137 1.236828180265331 1.7011916687482227 1.251891453169888 1.3605660116842473 1.0 9.931805834519798 -10.093081005146681 1.0562604011973415 1.029849061589765 1.3071692739099359 0.0 0.1843663391593942 0.39002193000811125 0.8725528855596346 0.0586074504083155 0.02994321702013042 8.070844778084893e-11 10.093081005146681 0.2773202123201708 KLS(ph)PVHSEMADYINATPSTLLGSR ddPTM_A549_PD325901_60min_R1 2 KLSPVHSEMADYINATPSTLLGSR 24 1 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 KLS(0.987)PVHS(0.013)EMADYINATPSTLLGSR;KLS(0.965)PVHS(0.035)EMADYINATPSTLLGSR 90.98 6.3223e-08 10089800.0 3634.3 4390.0 4243.8 4603.4 5648.0 4815.9 4185.700000000001 4815.8 4862.6 4856.2 5123.7 True False 4003.251460569745 4759.960706706338 4531.809788042511 4887.741562920052 5251.303964542228 4776.680907106554 4344.989104002926 4719.745091077984 4658.241832147002 4549.578703235724 4493.517381810352 0.8908948425958713 1.0592950471215583 1.0085216998129718 1.0877317583560508 1.1686399580425297 1.0630160075584532 0.9669460991942159 1.0503453508788898 1.036658242605993 1.0124760441903056 1.0 12.13362946742237 -10.301731705476728 0.6128825478008447 0.9984573007026698 1.0424314393850904 0.025971144959685444 0.06649599604490662 2.452851396488548 1.6278205609629484 0.05471683096369727 0.014969827656589123 4.991927790306443e-11 10.301731705476728 0.043974138682420616 KLS(ph)QRPTVAELLAR ddPTM_A549_MK2206_60min_R1 3 KLSQRPTVAELLAR 14 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 KLS(0.999)QRPT(0.001)VAELLAR;KLS(1)QRPTVAELLAR;KLS(1)QRPTVAELLAR 124.63 1.7539e-07 98761000.0 4009.6 4598.4 4340.6 3779.9999999999995 5555.200000000001 4084.16 4230.0 4339.200000000001 6426.8 5395.2 6444.5 True False 4686.322454691798 4832.438918645571 4956.16234911304 4706.10016969065 4738.037438928942 4516.343100354003 4998.536245993125 4954.294888242676 4971.140061490708 4176.420572870864 4844.152790848307 0.9674183819191902 0.9975818532757955 1.023122631159848 0.9715011835674404 0.9780941360644444 0.9323287879949596 1.0318700631071098 1.022737122908768 1.0262145469239345 0.8621570691909349 1.0 12.242028654880698 KLS(ph)QRPTVAELLAR ddPTM_A549_PD325901_60min_R1 4 KLSQRPTVAELLAR 14 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 KLS(0.996)QRPT(0.004)VAELLAR;KLS(0.997)QRPT(0.003)VAELLAR;KLS(0.999)QRPT(0.001)VAELLAR;KLS(0.956)QRPT(0.044)VAELLAR 118.72 5.8693e-07 209762000.0 7999.41 7657.01 8321.8 7613.9 10019.6 9879.900000000001 9608.6 10061.2 10772.0 10453.3 10368.1 True False 8811.504214345601 8302.293104978931 8886.567391048631 8084.193310578481 9315.8578617435 9799.441370070412 9974.260531027665 9860.521473141285 10319.290300639062 9793.276854028662 9092.889428801045 0.9690543675188464 0.9130533445927584 0.977309518677429 0.8890675921970859 1.0245211859979533 1.0777037867667691 1.0969297063521901 1.084421134816489 1.1348747151761776 1.0770258376846849 1.0 13.150523094176519 -6.9492519005787585 4.906661428987883 1.0699930898812209 0.9387215155169336 0.7501011824914936 0.03789567467389316 0.11035022801979154 5.783455446104724 0.00766376958999016 0.014619044774695358 1.1239528668953338e-07 6.9492519005787585 -0.13127157436428727 KLS(ph)RDEDDNLGPK ddPTM_A549_MK2206_60min_R1 4 KLSRDEDDNLGPK 13 2 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 KLS(1)RDEDDNLGPK;KLS(1)RDEDDNLGPK;KLS(1)RDEDDNLGPK;KLS(1)RDEDDNLGPK 66.24600000000001 0.0010344000000000002 18780500.0 3947.84 4899.7 4731.4 3962.3999999999996 5762.4 4409.1 4352.4 4761.3 6069.3 6151.7 7224.3 True False 4614.13887657883 5149.0738016892155 5402.383665528601 4933.1881778788975 4914.758593405125 4875.668035476293 5143.174741621866 5436.228855869713 4694.6132406805145 4762.026697458801 5430.306929463177 0.8497013035384666 0.9482104545052368 0.9948578847757071 0.908454759916596 0.905060921462681 0.8978623305843757 0.947124132839818 1.0010905325395891 0.8645207907510689 0.876935090284033 1.0 12.40681802838236 -11.118976844097277 1.4734253304274354 0.9999607127484761 0.9194352831336776 0.0 0.0578731568401372 0.4403030134680471 1.711760566068498 0.03445921248862405 0.007465245874200985 7.603668174292084e-12 11.118976844097277 -0.08052542961479847 KLS(ph)RDEDDNLGPK ddPTM_A549_PD325901_60min_R1 1 KLSRDEDDNLGPK 13 2 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 KLS(1)RDEDDNLGPK 52.172 0.0050592 16027000.0 1819.9 1907.3 1826.9 2392.2 2164.5 2069.5 1977.1 2854.0 3023.0 3551.0 4263.2 True False 2004.6549082604292 2068.034864669933 1950.8844200421468 2539.960760919614 2012.4729871196257 2052.646678140539 2052.3396224106327 2797.0747310803117 2895.9538227656776 3326.789253982547 3738.853426651424 0.5361683595218735 0.5531200688233713 0.5217868146784748 0.6793421595011396 0.5382593959886863 0.5490043186793021 0.5489221930394689 0.7481102926212906 0.7745566601040415 0.8897886261783928 1.0 11.868380199348946 -9.204254125634904 0.4941864119603153 0.9926952315764717 0.5408346968406476 0.8579828555333929 0.059524225525426556 0.17400933579841413 0.10072095164839447 0.028883697251864546 0.019278805970009718 6.248069825458983e-10 9.204254125634904 -0.4518605347358241 down KLS(ph)S(ph)SSEPYEEDEFNDDQSIKK ddPTM_A549_MK2206_60min_R1 1 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 2 KLS(0.465)S(0.482)S(0.482)S(0.465)EPY(0.106)EEDEFNDDQSIKK 45.332 0.009234000000000001 3559600.0 1823.2 2397.0 2208.4 2130.1 3651.6 3049.2 2681.1 2612.5 4579.3 4228.4 4240.3 True False 2130.9115870396263 2518.9970615852103 2521.5843274619265 2651.9745956238226 3114.45447724527 3371.8643201048526 3168.2211652794736 2982.8298754457 3542.0958616394446 3273.2015032486584 3187.316483673534 0.6685597737014334 0.7903190895815737 0.7911308275718137 0.832039933658328 0.977140015181584 1.0579006940090927 0.9940089669501372 0.9358436448732718 1.1113097427830607 1.026945871241546 1.0 11.638126562879554 -6.508975094098939 0.8973219681352514 1.0443058203359274 0.7020879960334679 0.8461301583391833 0.051068662969870435 0.20641055858417742 0.2874120676214133 0.009621425876495896 0.045088168527307314 3.097596934977324e-07 6.508975094098939 -0.3422178243024595 KLS(ph)S(ph)SSEPYEEDEFNDDQSIKK ddPTM_A549_PD325901_60min_R1 2 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 2 KLS(0.493)S(0.493)S(0.493)S(0.493)EPY(0.029)EEDEFNDDQSIKK;KLS(0.409)S(0.409)S(0.409)S(0.409)EPY(0.366)EEDEFNDDQSIKK 92.492 1.1645e-06 15347300.0 3204.3 3887.9 3449.0 3940.8 3913.6000000000004 3931.8 3825.1 3655.4 3435.9 3475.4 4265.0 True False 3529.598177119017 4215.546977586235 3683.0698805218503 4184.214265793839 3638.7222371870475 3899.780724384134 3970.666273675036 3582.4901793941726 3291.501071664105 3255.962650884526 3740.432038062565 0.943633821227573 1.127021406802452 0.9846642962746018 1.1186446440452211 0.9728080072460827 1.0426016793514865 1.0615528455722794 0.9577744343270566 0.8799788468737977 0.8704776928846486 1.0 11.868989202681927 -8.343407738376557 5.5801348345241815 0.9423066177995726 1.0382947864989274 0.4024449194046509 0.0628774887358128 0.19482355397879408 10.224258626452771 0.010291734590367172 0.012484191572048567 4.535156325152332e-09 8.343407738376557 0.09598816869935478 KLS(ph)SAMSAAK ddPTM_A549_MK2206_60min_R1 3 KLSSAMSAAK 10 1 A0A5K1VW95;P40925;P40925-3;B8ZZ51;B9A041;P40925-2 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic 1 KLS(0.823)S(0.162)AMS(0.015)AAK;KLS(0.478)S(0.478)AMS(0.044)AAK;KLS(0.5)S(0.5)AMSAAK 85.837 0.00033701 31485700.0 5905.3 7111.299999999999 7105.700000000001 7106.8 9048.8 6869.799999999999 6504.5 6835.9 9686.5 10206.099999999999 9261.4 True False 6901.970269276604 7473.234795181857 8113.39510761013 8847.966319036379 7717.733506872873 7596.757676195827 7686.283454388249 7804.909759065746 7492.523216161967 7900.534921555706 6961.538778363338 0.9914431979791775 1.073503291888409 1.1654600176654615 1.2709785294217009 1.1086246521903764 1.0912469093480839 1.104106965298741 1.1211472071840825 1.0762740041682946 1.1348834177453404 1.0 12.76519051926234 -9.642739829113653 0.5939430954627978 1.0034262510773244 1.1238238566800975 0.0 0.0747523803180887 0.6714079391903754 0.5129008428910972 0.03453067493207147 0.01729878285910219 2.276460771714369e-10 9.642739829113653 0.12039760560277313 KLS(ph)SAMSAAK ddPTM_A549_PD325901_60min_R1 3 KLSSAMSAAK 10 1 A0A5K1VW95;P40925;P40925-3;B8ZZ51;B9A041;P40925-2 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic 1 KLS(0.791)S(0.207)AMS(0.002)AAK;KLS(0.848)S(0.136)AMS(0.016)AAK;KLS(0.872)S(0.107)AMS(0.021)AAK 53.001000000000005 0.0058381 38427000.0 7621.659999999999 8084.85 7721.53 7334.55 10038.140000000001 8797.83 8111.92 8863.66 9036.82 9469.6 8573.02 True False 8395.405312430452 8766.188683283544 8245.559459131882 7787.588495528367 9333.09567610303 8726.183389391244 8420.623554612945 8686.867347893243 8657.033881788067 8871.687839907958 7518.592888851382 1.116619218055976 1.165934745088021 1.0966891785507433 1.0357773868932116 1.2413354219434072 1.160613896561747 1.119973335316386 1.1553847210924515 1.151416762387118 1.179966513822414 1.0 12.87624697020524 -10.682858494391215 0.8305282036344771 0.9952415146055449 1.1390092596844767 0.0 0.07132195667544718 0.421867544529497 0.490842485851085 0.03875947835978314 0.0089930609334962 2.0755896939929218e-11 10.682858494391215 0.14376774507893186 KLS(ph)SGDLR ddPTM_A549_PD325901_60min_R1 1 KLSSGDLR 8 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KLS(0.794)S(0.206)GDLR 56.043 0.0081997 15041000.0 5543.6 6037.4 5575.9 4899.1 6528.8 6061.8 6183.5 7035.4 7667.5 7481.5 7440.9 True False 6106.3821910173765 6546.192886257144 5954.3141046105475 5201.706280336629 6070.239611137269 6012.434710583388 6418.816476241031 6895.073427835472 7345.2616394494935 7009.1168131992235 6525.716471751407 0.9357412657216645 1.0031378032733074 0.912438370619632 0.7971088389840153 0.9302027811680432 0.9213447652238771 0.983618657664162 1.0566002151155267 1.125587002016674 1.0740762096453877 1.0 12.6719205914783 -8.011900344272119 2.4540655213253824 1.0607962934524193 0.9149995473323488 0.6309065905860567 0.05264819355999879 0.175359894562261 2.1207741213598093 0.01061882118842517 0.01466352149245341 9.729704616022383e-09 8.011900344272119 -0.14579674612007054 KLS(ph)SGETVTYQK ddPTM_A549_MK2206_60min_R1 1 KLSSGETVTYQK 12 1 E2QRF0;Q70EL2-3;Q70EL2 E2QRF0 USP45 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 45 1 KLS(0.663)S(0.263)GET(0.073)VT(0.001)YQK 73.498 0.00058776 4709600.0 2930.1 2903.9 3165.6 2708.1 4215.1 2996.1 2468.1 3130.1 3863.0 3915.6 4369.0 True False 3424.62924593287 3051.6961064402562 3614.5296807704553 3371.584621571227 3595.0643737092046 3313.1453133497803 2916.5218223961315 3573.8012605292192 2988.036667943393 3031.063240497693 3284.056721734233 1.0428045360082587 0.9292458581009914 1.1006294918261057 1.0266523715189586 1.094702277800712 1.0088575180273336 0.8880850939919165 1.0882276292237665 0.9098614674248016 0.9229631207152414 1.0 11.681263330004963 -7.531361701434853 24.952303823481184 0.9628611889903831 1.0371095609223553 0.24331605814987423 0.0648189036249985 213.1500410364982 626971.1272119143 0.009733646551679595 0.014451631159856758 2.9419703980478196e-08 7.531361701434853 0.0742483719319722 KLS(ph)SSDAPAQDTGSSAAAVETDASR ddPTM_A549_PD325901_60min_R1 1 KLSSSDAPAQDTGSSAAAVETDASR 25 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KLS(0.74)S(0.188)S(0.073)DAPAQDTGSSAAAVETDASR 231.34 8.876399999999998e-96 208030000.0 10766.0 12024.0 10593.0 11420.0 12346.0 14589.0 13071.0 16124.0 17795.0 22350.0 25858.0 True False 11858.95639448969 13037.304678231665 11311.904680883723 12125.387463298219 11478.859551387812 14470.19202096754 13568.424057725646 15802.3941709667 17047.13803377942 20938.817185725125 22677.629927367372 0.522936322379011 0.5748971440131951 0.498813355589356 0.5346849517402741 0.506175450792374 0.6380822011521101 0.598317553517851 0.6968274119288085 0.7517160341878112 0.9233247589271291 1.0 14.468982249516317 -9.3349921884785 0.3720845348186599 1.0322040461627324 0.5022026983081251 0.9478246933692582 0.03711056608374016 0.14711053150040213 0.05097149283214791 0.029626406778738866 0.016362223825533356 4.6238933817951785e-10 9.3349921884785 -0.5300013478546073 down KLS(ph)SSS(ph)EPYEEDEFNDDQSIKK ddPTM_A549_PD325901_60min_R1 1 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 2 KLS(0.618)S(0.382)S(0.382)S(0.617)EPY(0.001)EEDEFNDDQSIKK 96.351 2.2328000000000002e-07 25968000.0 2904.5 2995.4 3740.3 3211.2 3311.6 2999.7 3623.4 3548.6 3460.7 3308.4 3441.6 True False 3199.3627018201114 3247.8328703572124 3994.1392502510525 3409.5485308356606 3079.0046403997935 2975.271437747366 3761.2904698005595 3477.820389177153 3315.2588139084282 3099.5070593849223 3018.305018099911 1.059986542988349 1.0760452806727248 1.32330537381058 1.1296235835641442 1.020110499746011 0.9857424680095334 1.2461598305158614 1.152242854291286 1.09838428986725 1.026903192619058 1.0 11.559522891011973 -10.130790467197816 0.7338832254468375 1.0028890685770406 1.1244937511684756 0.1670130910143207 0.091995984099694 0.8362854956947517 0.87866179050654 0.05215080847315087 0.01976159817796105 7.39962196369944e-11 10.130790467197816 0.12160468259143498 KLS(ph)SSSEPYEEDEFNDDQSIK ddPTM_A549_PD325901_60min_R1 1 KLSSSSEPYEEDEFNDDQSIK 21 1 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 KLS(0.339)S(0.185)S(0.238)S(0.238)EPYEEDEFNDDQSIK 98.96700000000001 1.4487999999999998e-07 4114500.0 1979.5 2009.5 1668.7 1924.5 1436.1 1876.3 1240.3 1660.1 1891.7 2015.4 2069.3 True False 2180.457382769121 2178.8476173408635 1781.9480167082656 2043.3719941433828 1335.233290276042 1861.020034885282 1287.500295218203 1626.9880031767445 1812.1984275639531 1888.147300049684 1814.7892183734737 1.2014934630939575 1.2006064369798723 0.9819035724189268 1.1259555509012662 0.7357511697544471 1.0254744826802769 0.7094489443639854 0.8965162381970463 0.998572401255589 1.0404223702309396 1.0 10.825586278466398 -5.810948380297205 1.5698062774287043 0.9596393090927294 1.2307569244238878 0.39091291958690944 0.12082209563479185 0.39493885421523933 1.645948350410934 0.01698572717074136 0.11937703084659618 1.545438117477789e-06 5.810948380297205 0.2711176153311584 KLS(ph)SSSEPYEEDEFNDDQSIKK ddPTM_A549_MK2206_60min_R1 1 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 KLS(0.802)S(0.136)S(0.024)S(0.038)EPYEEDEFNDDQSIKK 183.47 4.972200000000001e-50 16658000.0 2959.7 4301.6 3909.7 3209.6 4454.7 3943.1 4384.8 4525.3 6996.0 6035.1 6172.2 True False 3459.22500228235 4520.533066380869 4464.1542497183 3995.9521440844183 3799.4195311054063 4360.3562247820555 5181.461402229474 5166.775133150021 5411.41717031633 4671.766718441013 4639.472395945989 0.7456074111584435 0.9743636087437334 0.9622116199288343 0.8612945186560687 0.8189335352928001 0.9398388119718467 1.1168212589770077 1.1136557548364323 1.1663863276877935 1.006960774790522 1.0 12.17974503505133 -7.636634647309419 4.4207356921586864 1.086182123948491 0.8822246994072218 0.6431305442619486 0.07402152797580427 0.11914041203951155 4.08348730805599 0.012836041315556957 0.019231480362655696 2.3086885693307178e-08 7.636634647309419 -0.2039574245412692 KLSASS(ph)PR ddPTM_A549_MK2206_60min_R1 3 KLSASSPR 8 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-4;Q15326-5;Q15326-2;Q15326-6;Q15326-3;Q15326 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KLS(0.023)AS(0.131)S(0.845)PR;KLS(0.005)AS(0.451)S(0.544)PR;KLS(0.006)AS(0.106)S(0.888)PR 71.03 0.0026425 107067000.0 4465.0 4666.5 5029.6 4845.2 5495.5 3764.7000000000003 4253.7 3681.8999999999996 5846.7 6629.8 6756.6 True False 5218.582841230763 4904.004917766952 5742.872909528393 6032.274217509294 4687.119229844829 4163.07805519439 5026.54222921536 4203.820600345845 4522.431785261359 5132.123575403925 5078.74974732651 1.027532975803319 0.9655929434893803 1.130765088898401 1.187747874500949 0.9228884003020943 0.819705294080667 0.9897203995651425 0.8277274544899099 0.8904616313575993 1.0105092455294753 1.0 12.310257672342757 -6.794904161333411 24.965413539866027 0.9297227922048077 1.0736625082013274 0.46710051079932446 0.07934003727761069 136.71513930505003 101991.92786377341 0.011987404305169718 0.02265506654066423 1.603599228608585e-07 6.794904161333411 0.14393971599651967 KLSASS(ph)PR ddPTM_A549_PD325901_60min_R1 3 KLSASSPR 8 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-4;Q15326-5;Q15326-2;Q15326-6;Q15326-3;Q15326 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KLS(0.008)AS(0.136)S(0.856)PR;KLS(0.015)AS(0.126)S(0.859)PR;KLSAS(0.046)S(0.954)PR 60.398 0.007213 156810400.0 8982.900000000001 9313.4 9508.599999999999 10020.9 11053.099999999999 9805.7 10331.8 10332.3 10074.8 11147.0 11663.2 True False 9894.837395138531 10098.272903380137 10153.91077585678 10639.868233884863 10276.768387124946 9725.845630269469 10724.982302777891 10126.214170967456 9651.391192060746 10443.17651764108 10228.70033911637 0.967360179406069 0.9872488750855809 0.9926882633394214 1.0401974719306335 1.004699330942833 0.9508388463660533 1.0485185749125576 0.989980528830531 0.943559872914852 1.020968077215491 1.0 13.320335227132547 -8.532756073471893 24.97783650019648 0.9730015315294828 0.9996009480164881 0.0 0.032447288979624095 328.0511214638335 829574.407160659 0.005410227141268792 0.006137837319207711 2.9325398777847993e-09 8.532756073471893 0.026599416487005367 KLSCS(ph)LEDLR ddPTM_A549_MK2206_60min_R1 2 KLSCSLEDLR 10 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 KLS(0.06)CS(0.94)LEDLR;KLS(0.247)CS(0.753)LEDLR 62.162 0.002997 54454000.0 2458.2 3163.6 2290.11 2552.1000000000004 3629.7 3279.3 2649.1 2819.8 3983.5 3558.0 3307.8999999999996 True False 2873.084062780171 3324.6137271718676 2614.8820341259875 3177.3646145681246 3095.775938234516 3626.3133493768346 3130.4071794941815 3219.5152852753254 3081.2436103423533 2754.245328861681 2486.4571366044097 1.1554930991908239 1.3370886946847083 1.0516497532295928 1.2778682438528748 1.2450550193124232 1.4584258445448415 1.2589829655254672 1.2948203441270678 1.2392104271502562 1.1076986963961792 1.0 11.27987584576807 -10.376557087635005 0.7577793574803232 1.0002341205519654 1.261709564427411 0.36378415556704824 0.10075871849013525 0.4265958900784973 0.44779787987228103 0.062326160482594095 0.019001509850729577 4.2018729079006835e-11 10.376557087635005 0.26147544387544563 KLSCS(ph)LEDLR ddPTM_A549_PD325901_60min_R1 3 KLSCSLEDLR 10 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 KLS(0.069)CS(0.931)LEDLR;KLS(0.003)CS(0.997)LEDLR;KLS(0.088)CS(0.912)LEDLR 103.83 0.00015126 60429000.0 7523.8 8364.5 9159.3 6619.2 7484.799999999999 6646.8 7707.7 7743.2 5687.6 7468.9 8726.5 True False 8287.61063727118 9069.405770215299 9780.905177345254 7028.052950706088 6959.0934691582215 6592.670664539518 8001.020741315279 7588.755801577112 5448.5699511617795 6997.312379349551 7653.195821841259 1.0828954113024758 1.185048178740227 1.2780157995476582 0.9183161014446943 0.9093055543277546 0.861427149913617 1.0454483234940064 0.9915799854382082 0.7119339525603469 0.9142994040973185 1.0 12.90184659894338 -6.33419730474694 6.31059268424147 0.8885719954295922 1.1815917889722358 0.5889771359446114 0.09549002251597481 0.13590044271475493 9.523644513876876 0.017489544262463932 0.04114821959937631 4.632364185371873e-07 6.33419730474694 0.2930197935426436 KLSCS(ph)LEDLRSESVDK ddPTM_A549_MK2206_60min_R1 2 KLSCSLEDLRSESVDK 16 2 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 KLSCS(0.999)LEDLRSESVDK;KLS(0.096)CS(0.903)LEDLRSESVDK 105.32 1.8403e-07 56814000.0 3978.1000000000004 3828.9 3958.1 3769.5 4580.6 3099.3 4034.7999999999997 2966.7400000000002 5348.1 5102.5 5291.0 True False 4649.506024792856 4023.774655445813 4519.418097503644 4693.027669219284 3906.799807884131 3427.265868851164 4767.870932702851 3387.284480260202 4136.76388916077 3949.841706159847 3977.0986758287554 1.1690698179179533 1.011736188468427 1.1363605647933488 1.1800128816872621 0.9823240825348707 0.8617502728008085 1.19883144003444 0.8516973694534631 1.0401461533510339 0.9931465191360311 1.0 11.957500641968085 -6.774261742087736 24.92580569592771 1.0061292127922774 1.11711679909632 0.3016833865474362 0.09624260256067632 227.34885160294758 441951.0773713329 0.012760871024163132 0.024225620910309296 1.6816602468319357e-07 6.774261742087736 0.1109875863040426 KLSCS(ph)LEDLRSESVDK ddPTM_A549_PD325901_60min_R1 4 KLSCSLEDLRSESVDK 16 2 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 KLS(0.405)CS(0.595)LEDLRSESVDK;KLS(0.008)CS(0.991)LEDLRSESVDK;KLS(0.009)CS(0.99)LEDLRS(0.001)ESVDK;KLS(0.208)CS(0.792)LEDLRSESVDK 143.93 5.3879e-15 126815000.0 27095.300000000003 29085.4 32860.700000000004 28259.8 26819.9 29755.899999999998 33396.7 34002.4 22362.0 29126.7 31548.4 True False 29845.994909494384 31536.52873322018 35090.824709441666 30005.343663337568 24936.16274763209 29513.577815937217 34667.629693875475 33324.195457633214 21422.20290594974 27287.635191206264 27668.14680178501 1.0787131904175407 1.1398135538006327 1.2682752105095012 1.0844724758147435 0.9012588709419214 1.0666987575052604 1.2529798234133591 1.2044245571041752 0.7742550688131988 0.9862473040458858 1.0 14.755938395762922 -8.755621594074286 24.999911566893175 0.8933982250184263 1.1234469390287096 0.3975720189915457 0.11072789275866576 102.35303372762793 439826.19852778927 0.021750292101375683 0.024339333405583582 1.7554093446480602e-09 8.755621594074286 0.23004871401028337 KLSDAS(ph)DER ddPTM_A549_MK2206_60min_R1 1 KLSDASDER 9 1 E7ER68;Q658Y4 E7ER68 FAM91A1 Protein FAM91A1 1 KLS(0.36)DAS(0.64)DER 89.301 0.00045761 100620000.0 3713.5 3236.0 2990.1 2527.0 4549.0 3314.9 3592.8 3319.8 4318.1 3677.9 3696.0 True False 4340.248013641758 3400.6985779264664 3414.1411417967333 3146.1151134413426 3879.848126023863 3665.680517747465 4245.565254043524 3790.3918164611077 3340.057244588756 2847.059835587513 2778.181195589317 1.5622623968992382 1.2240737153233443 1.2289123356018232 1.1324369765500404 1.3965425049250095 1.319453361633559 1.5281815530188771 1.3643429098428828 1.2022460053690818 1.024792709743896 1.0 11.439924980976803 -9.546762248107598 0.9702317654054687 1.0374301237160024 1.3329565565693413 0.4982965834928088 0.12448329918366859 0.2924889754431024 0.5780330098767301 0.03808647042091697 0.026447065578286213 2.8394730554144754e-10 9.546762248107598 0.2955264328533389 KLSDAS(ph)DER ddPTM_A549_PD325901_60min_R1 2 KLSDASDER 9 1 E7ER68;Q658Y4 E7ER68 FAM91A1 Protein FAM91A1 1 KLS(0.213)DAS(0.787)DER;KLS(0.49)DAS(0.51)DER 110.08 0.00015749 343200000.0 21440.5 19860.1 20486.7 18444.7 21008.5 17202.0 19167.8 19305.3 19319.4 23092.3 25721.0 True False 23617.12377633813 21533.78032602701 21877.050658534943 19583.987228046983 19532.93543539046 17061.91261530493 19897.24111802261 18920.24064678512 18507.472803023233 21634.24823704342 22557.480058852812 1.0469752700532458 0.9546181696645656 0.969835752994456 0.8681815157079629 0.8659183288394241 0.7563749395229492 0.8820684343335516 0.8387568379722347 0.820458347064342 0.959072032008865 1.0 14.461318289943351 -5.646939342475728 1.388832803225681 0.8890140668058842 1.0478800613947086 0.3846494857343822 0.06511790219056822 0.7600035495518447 2.052489559662637 0.012105616396552993 0.13785124846550278 2.2545540817278107e-06 5.646939342475728 0.15886599458882433 KLSELLR ddPTM_A549_PD325901_60min_R1 2 KLSELLR 7 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 88.948 0.012849000000000001 7617700.0 3173.1000000000004 3207.8 3258.6 3300.8 3978.1000000000004 3617.6000000000004 3268.3999999999996 3386.8 3485.1000000000004 3817.1 4018.7 False True 3495.2307760872395 3478.132563775079 3479.748191553637 3504.6829193392964 3698.691979699969 3588.1394650114567 3392.780750537107 3319.247617106799 3338.633366761716 3576.087654569638 3524.425376638226 0.991716493490115 0.9868651459696094 0.9873235548181177 0.9943983897545985 1.0494453944795867 1.0180778656275606 0.9626479178779809 0.9417840533973411 0.9472844534862225 1.0146583548835668 1.0 11.783172343917787 -7.767134805325555 24.948537397452068 0.9705954563357471 1.004614228670823 0.26559180967646134 0.02579402005727778 146.35713223665522 641109.2584398685 0.004400613592967094 0.006173111944927487 1.7094846074531874e-08 7.767134805325555 0.034018772335076 KLSEYMK ddPTM_A549_PD325901_60min_R1 1 KLSEYMK 7 1 D6REM9;D6RCQ1;Q7L099;Q7L099-2;Q7L099-4;Q7L099-3 D6REM9 RUFY3 Protein RUFY3 0 43.0 0.054891999999999996 3820700.0 3016.0 3219.5 3753.1 3032.5 4185.6 4477.9 3736.7 3962.3 4000.7 4378.6 3952.1 False True 3322.182099738147 3490.8185638362343 4007.807935223703 3219.8106376928067 3891.6178955361065 4441.433467043015 3878.902163300701 3883.2688181357803 3832.5644918090134 4102.13444874345 3466.016754426042 0.9585014542978706 1.0071557096134982 1.1563152226848885 0.9289656876531729 1.122792580435908 1.281422965244292 1.119123892966591 1.1203837411278854 1.1057547505836192 1.1835298959548008 1.0 11.759062913040419 -5.535407696235729 22.922286642866577 1.0778509490169594 0.970664949226952 0.15859206707767104 0.09217210013025784 100.11521733233646 183166.9506715902 0.012799363580288872 0.04967342874869303 2.9146895491085963e-06 5.535407696235729 -0.10718599979000742 KLSFLS(ph)WGTNK ddPTM_A549_MK2206_60min_R1 2 KLSFLSWGTNK 11 1 Q8IUC4;Q8IUC4-2;A8MT19 Q8IUC4 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 KLS(0.08)FLS(0.919)WGT(0.001)NK;KLS(0.073)FLS(0.927)WGTNK 173.06 1.4333e-15 43207000.0 11842.8 10446.6 7428.2 5911.799999999999 16477.4 12725.9 10466.8 11949.0 15167.1 14694.3 15060.400000000001 True False 13841.575111338781 10978.287318963734 8481.63045700629 7360.191265390785 14053.596287479788 14072.546291231258 12368.482075546306 13642.807342277765 11731.776066881766 11374.847424365425 11320.487034105348 1.2227013793344867 0.9697716437366461 0.7492284061148247 0.650165601817012 1.2414303594130158 1.2431043159923025 1.092575084294841 1.2051431445640048 1.0363313902959583 1.0048019480165742 1.0 13.46664840720455 -6.7758592224622385 24.999990911508654 1.0681066375157036 0.8924714268033204 0.2709515020282127 0.16066811818712964 295.80934883470985 512850.8130982426 0.024555672187029094 0.046555047548151755 1.6754859005514267e-07 6.7758592224622385 -0.1756352107123832 KLSFLS(ph)WGTNK ddPTM_A549_PD325901_60min_R1 2 KLSFLSWGTNK 11 1 Q8IUC4;Q8IUC4-2;A8MT19 Q8IUC4 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 KLS(0.206)FLS(0.794)WGTNK;KLS(0.064)FLS(0.936)WGTNK 186.05 4.411399999999999e-19 55514000.0 26602.0 21479.8 23580.5 22152.8 20477.6 22482.1 18922.9 17259.5 29240.0 26224.0 33401.0 True False 29302.615456642656 23289.978129364645 25180.81453106565 23521.128143340873 19039.324019884898 22299.013231516506 19643.021314508198 16915.245732684176 28011.14448483905 24568.212164584154 29292.888746383982 1.0003320502236186 0.7950727676948434 0.8596220997211844 0.8029637618531018 0.6499640299980718 0.7612432295285038 0.6705730351340989 0.5774522915488236 0.956243842229348 0.8387090934354141 1.0 14.838262852540742 -8.918991457688932 10.989117172598966 0.9807292168752814 0.7630282333373433 0.27264446143197263 0.1146469102159485 0.2913410447725011 37.853283551171096 0.018812456091412407 0.020009794829998373 1.2050596429365698e-09 8.918991457688932 -0.2177009835379381 KLSGDQITLPTTVDYSSVPK ddPTM_A549_MK2206_60min_R1 2 KLSGDQITLPTTVDYSSVPK 20 1 E9PJ38;E9PND3;E9PN10;O00559;O00559-2 E9PJ38 EBAG9 Receptor-binding cancer antigen expressed on SiSo cells 0 ; 116.21 3.6944e-14 10425300.0 3598.7 4498.5 4330.8 4405.4 6067.8 3945.8999999999996 4642.9 3814.2 6453.6 5531.8 6654.700000000001 False True 4206.072580232282 4727.45443535297 4944.972561751544 5484.723197765921 5175.234657966056 4363.452518923564 5486.454831328955 4354.874530497606 4991.869904281513 4282.162537998046 5002.154329623436 0.8408522214765247 0.945083682715734 0.988568571838487 1.0964722070418034 1.034601157208928 0.8723146531250758 1.0968183845982973 0.8705997943141117 0.9979440007916156 0.8560636589396091 1.0 12.288333853805856 -5.348194704951466 2.3286229863481838 0.9967235914833433 0.8193725741842974 0.16975609557979066 0.08127894177257872 0.40841522326189916 2.978359032010646 0.008733432428436409 0.13498027382728514 4.485442513734502e-06 5.348194704951466 -0.1773510172990459 KLSGDQPAART(ph)PR ddPTM_A549_PD325901_60min_R1 2 KLSGDQPAARTPR 13 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLS(0.001)GDQPAART(0.999)PR;KLSGDQPAART(1)PR 69.331 0.001164 29669000.0 8622.3 7717.700000000001 8549.2 8185.0 9821.4 9578.0 9368.6 9527.1 11174.6 9184.4 11211.0 True False 9497.629548598215 8368.0976642705 9129.400122515917 8690.568860516281 9131.578745990624 9499.999943575773 9725.12719969463 9337.074516634635 10704.97042271827 8604.49541658049 9832.11807238439 0.9659800135307918 0.8510981665053531 0.9285283247520992 0.8838959008156753 0.9287499070661712 0.9662211004420866 0.9891182274356259 0.9496503650479757 1.0887756172075957 0.8751415873196294 1.0 13.263286525578176 -7.83399692776704 1.011837663834425 1.0389028422279258 0.9053302033876679 0.00012400802748813167 0.06354832365375397 0.242285584903182 0.4995889119519773 0.008380410899981492 0.01373689882485634 1.4655582083920512e-08 7.83399692776704 -0.13357263884025794 KLSKPSQVS(ph)SGQK ddPTM_A549_PD325901_60min_R1 1 KLSKPSQVSSGQK 13 2 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 KLSKPS(0.001)QVS(0.589)S(0.41)GQK 44.601000000000006 0.011993 8099100.0 2269.3 1667.9 1890.8 2065.2 2233.3 2254.3 1893.9 1883.9 2328.3 2264.6 1876.0 True False 2499.6776654296345 1808.4597864955595 2019.1210583040618 2192.7627135904963 2076.4407124667423 2235.9417282107825 1965.973400881845 1846.324136609041 2230.449647881351 2121.612769520945 1645.2638929438144 1.5193171600922006 1.099191317728212 1.2272323406376575 1.3327726469867767 1.2620715262591935 1.3590170779291146 1.1949289164574055 1.122205467783941 1.3556789627775054 1.2895273388178574 1.0 10.68410328899165 -10.911461892573065 0.9952592736538678 0.9887730496472537 1.2725550164618373 0.0 0.1407688122772799 0.42965828492846003 0.7043108601307733 0.09179884941488635 0.018520158957384476 1.2261344858556743e-11 10.911461892573065 0.2837819668145837 KLSKPSQVSS(ph)GQK ddPTM_A549_PD325901_60min_R1 1 KLSKPSQVSSGQK 13 2 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 KLSKPSQVS(0.166)S(0.834)GQK 59.261 0.0020005 10385000.0 1658.8 1357.0 1663.5 1237.1 2023.1 1688.3 1698.0 1852.8 2013.9 1793.3 1753.5 True False 1827.2001548559806 1471.3591523919147 1776.3951134381252 1313.5128573420518 1881.0044353161072 1674.5510445540817 1762.6183191812524 1815.8444505065181 1929.2627865259008 1680.0707319535084 1537.830616352334 1.1881673673463586 0.9567758222176077 1.1551305420434768 0.854133636939578 1.2231544978456512 1.0889047381083117 1.1461719518643119 1.1807831312486292 1.2545352953773456 1.0924940068748024 1.0 10.586680891729086 KLSLGQY(ph)DNDAGGQLPFSK ddPTM_A549_MK2206_60min_R1 2 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 KLS(0.008)LGQY(0.992)DNDAGGQLPFSK;KLS(0.001)LGQY(0.999)DNDAGGQLPFSK 175.32 9.487899999999999e-35 17339400.0 5908.3 7117.7 6577.4 6305.5 8368.7 5863.5 6663.299999999999 6046.1 8305.1 8291.4 9042.3 True False 6905.476595933645 7479.960527845246 7510.174223622564 7850.347783064656 7137.675315949858 6483.971678123704 7873.9353588477525 6903.153190404693 6424.00811051946 6418.366981372609 6796.847355215709 1.0159822981215807 1.1005044157870245 1.104949667268821 1.1549983945189706 1.0501450073720733 0.9539675292469363 1.158468764611216 1.0156404623545663 0.9451452673260137 0.9443153047195234 1.0 12.730650007543566 -8.515001650376849 21.923350944197853 0.9744277413768497 1.0769900989315588 0.43279939638257203 0.057250687663166024 53.791207141656635 149711.40858713773 0.009511194462021645 0.011040615281326483 3.0549095041306376e-09 8.515001650376849 0.1025623575547091 KLSLGQY(ph)DNDAGGQLPFSK ddPTM_A549_PD325901_60min_R1 2 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 KLS(0.004)LGQY(0.996)DNDAGGQLPFSK;KLS(0.003)LGQY(0.997)DNDAGGQLPFSK 203.26 3.0435e-55 46741000.0 10536.4 10314.3 11706.400000000001 10799.7 13054.4 12119.599999999999 13728.7 13558.3 12305.400000000001 10754.0 12375.7 True False 11606.04757151227 11183.522259038997 12500.866700301818 11466.772941101737 12137.50397923513 12020.901995840579 14251.153191132897 13287.869070219414 11788.2468311812 10074.990604710876 10853.567356026006 1.0693302202679453 1.0304005947712478 1.1517749224969076 1.056498067866624 1.1182962781814103 1.1075530838408127 1.3130386280986701 1.2242858623659678 1.0861172593761306 0.9282653596024485 1.0 13.405881685902195 -9.631175729590195 1.3469244598020411 1.0195831250774565 1.130894997148749 0.34319749841549296 0.0815020020213686 0.3883236948860076 1.4335265856386907 0.021352412919105022 0.01572882980481075 2.3378910609267645e-10 9.631175729590195 0.11131187207129245 KLSLGQYDNDAGGQLPFSK ddPTM_A549_MK2206_60min_R1 2 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 0 ; 117.74 5.2554999999999997e-14 8033500.0 3060.3999999999996 3380.7 3891.2 3746.9 4935.799999999999 3613.3 3649.4 3085.7 5670.0 5573.2 4820.9 False True 3576.9207004037235 3552.763189862798 4443.0306715358865 4664.8906682047345 4209.750358414723 3995.65700768558 4312.448741401259 3523.1074245599248 4385.754053129444 4314.210249244497 3623.737479928717 0.9870805267257068 0.9804140640818949 1.2260906580968127 1.2873147390071142 1.1617150474425464 1.1026342360109869 1.1900555063072862 0.972230313060434 1.2102847067210059 1.1905416088058791 1.0 11.823262728422797 -11.049123851120536 1.3273227337671765 0.9994103695956312 1.1356335993267592 0.0 0.11611056279574795 0.6303495799270581 1.965896085066095 0.07733399847694893 0.016919493498063896 8.930507692120168e-12 11.049123851120536 0.136223229731128 KLSLGQYDNDAGGQLPFSK ddPTM_A549_PD325901_60min_R1 1 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 0 134.07 1.0931e-16 3672200.0 2648.5 2628.5 3382.2 3390.4 3298.0 3603.2 3009.9 3544.1 3371.7 3497.2 3517.0 False True 2917.3737702773506 2850.012919721552 3611.7364308208166 3599.817307842933 3066.3598574823422 3573.856733837154 3124.443391580477 3473.4101452073346 3229.99917440259 3276.3861951641147 3084.431296099891 0.9458384675211355 0.9239994819548261 1.1709570044201265 1.1670927189705027 0.9941410792192392 1.1586760704821395 1.0129722764553646 1.1261103950019207 1.0471943980359564 1.0622334818437815 1.0 11.590788796101581 -9.913992134007191 0.997629901481326 1.006380159410724 1.063988524144477 0.0010664796132490162 0.08496822070891429 0.9983334653421221 2.023676223422863 0.028876586800211552 0.016187454378432907 1.2190116776080032e-10 9.913992134007191 0.05760836473375308 KLSLQERPAGSYLEAQAGPYATGPAS(ph)HISPR ddPTM_A549_MK2206_60min_R1 1 KLSLQERPAGSYLEAQAGPYATGPASHISPR 31 2 J3KPJ3;Q8N5S9;Q8N5S9-2 J3KPJ3 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 1 KLSLQERPAGSYLEAQAGPYAT(0.003)GPAS(0.642)HIS(0.355)PR 61.938 0.00030025 3926400.0 1050.8 1305.6 1084.3 1138.3 1526.0 1004.9 1166.0 1008.2 1820.2 1478.9 1596.0 True False 1228.1493504065588 1372.049463331519 1238.0700444969066 1417.183551100228 1301.5274214799765 1111.2378510013664 1377.8471070515338 1151.1154374830078 1407.9276062621186 1144.8154628593422 1199.6691526408404 1.0237400434136568 1.1436898750886582 1.0320095684477124 1.1813119875430418 1.084905299611076 0.9262869254870733 1.1485225772609633 0.9595274121611355 1.1735965729908429 0.9542759854575336 1.0 10.22842087578309 -11.234754076035369 1.7143067195353174 0.9999373092288832 1.0897504542248373 0.13848584917241313 0.08294190911551906 0.5994302964243549 3.1754764642575632 0.05935303570776552 0.012174108263652013 5.824329333803582e-12 11.234754076035369 0.08981314499595405 KLSLQERPAGSYLEAQAGPYATGPASHIS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KLSLQERPAGSYLEAQAGPYATGPASHISPR 31 2 J3KPJ3;Q8N5S9;Q8N5S9-2 J3KPJ3 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 1 KLSLQERPAGSYLEAQAGPYAT(0.014)GPAS(0.256)HIS(0.73)PR;KLSLQERPAGSYLEAQAGPYAT(0.017)GPAS(0.202)HIS(0.781)PR 81.204 1.9624e-06 11636900.0 2645.1000000000004 2179.5 2762.7 2513.4 3140.2 2747.7 2712.9 3016.9 3279.4 2930.9 2491.3999999999996 True False 2913.628604780298 2363.1741139559153 2950.19343546469 2668.6470096544417 2919.643185101893 2725.323642197031 2816.1408940558417 2956.725562787736 3141.578222420697 2745.8424738094786 2184.973594285833 1.3334845841615897 1.08155728752792 1.3502192626858598 1.2213635060091879 1.3362372857673777 1.247302781747261 1.288867243714361 1.3532088307704027 1.4378106127399375 1.2566936648527178 1.0 11.093400129320193 -10.971029123297589 1.2499038388282593 1.000636739996143 1.3035581342417306 0.11554096777477407 0.11391763396536879 0.2570817383577347 0.716745747365149 0.06583824961863363 0.015345408529891457 1.0689831920132e-11 10.971029123297589 0.3029213942455875 KLSNS(ph)SSSVSPLILSSNLPVNNK ddPTM_A549_MK2206_60min_R1 1 KLSNSSSSVSPLILSSNLPVNNK 23 1 Q9BVC5 Q9BVC5 C2orf49 Ashwin 1 KLS(0.163)NS(0.2)S(0.2)S(0.2)S(0.2)VS(0.038)PLILSSNLPVNNK 66.447 0.00024121 1761500.0 733.74 1234.4 1052.2 938.86 1510.6 583.97 1095.9 928.82 1363.3 968.86 1266.5 True False 857.5773737793191 1297.2256874513073 1201.417781812823 1168.8807421470271 1288.3927410797194 645.765317792087 1295.0108444406305 1060.4830793919523 1054.5147267427465 749.9938530975069 951.9930963782114 0.9008231015980158 1.362641906108887 1.2620026199596717 1.2278248094381663 1.3533635338127095 0.6783298326940125 1.3603153734700444 1.1139608926015148 1.1076915691453764 0.78781438221643 1.0 9.894807301273246 KLSS(ph)ERPS(ph)SDGEGVVENGITTCNGK ddPTM_A549_PD325901_60min_R1 2 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 2 KLS(0.417)S(0.576)ERPS(0.53)S(0.476)DGEGVVENGITTCNGK;KLS(0.471)S(0.529)ERPS(0.529)S(0.471)DGEGVVENGITTCNGK 103.95 2.4843e-12 25830000.0 4493.7 4712.7 5029.0 4485.0 5525.3 5000.3 4580.6 4771.799999999999 4992.4 5518.700000000001 5544.4 True False 4949.8971159129005 5109.855768222085 5370.298181833685 4762.028263825966 5137.221989250209 4959.579214644183 4754.917239600501 4676.622705595314 4782.586789538657 5170.248340172764 4862.47394884738 1.0179791538186531 1.0508757110016693 1.1044374197843634 0.9793426790399106 1.0565037557616028 1.0199703416035413 0.9778802497703099 0.9617784598524953 0.9835706761313016 1.0632958437542561 1.0 12.247474805409889 -7.565701479216631 4.247677496224615 0.988393685387685 1.0421894272639416 0.2286068268901409 0.03729685351669431 0.15282660254329372 6.028142333188683 0.004442367651152979 0.006775040880999938 2.7183071082310415e-08 7.565701479216631 0.053795741876256575 KLSS(ph)GDLR ddPTM_A549_MK2206_60min_R1 2 KLSSGDLR 8 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KLS(0.043)S(0.957)GDLR;KLS(0.178)S(0.822)GDLR 62.633 0.0042958 33235000.0 12504.2 12132.2 10714.400000000001 11243.8 14906.099999999999 11496.599999999999 10613.2 10973.3 15003.7 15362.099999999999 14743.8 True False 14614.603261661307 12749.677159184024 12233.86303122536 13998.531504753355 12713.432435991264 12713.162581174547 12541.481060514016 12528.798879321834 11605.385905985584 11891.79094055819 11082.50755182082 1.3187090731339204 1.1504325261740331 1.1038894378389463 1.2631195096684993 1.147162081915522 1.1471377322983025 1.131646516085928 1.1305021738752068 1.047180509620213 1.0730234908438576 1.0 13.435996725131421 -8.321983399304589 0.4128610669287506 0.9950615340609424 1.2188392152795262 0.545648510819797 0.05798607661308887 0.4182669600681288 0.17603053768514906 0.023232549948173295 0.03153130913785004 4.764491984963037e-09 8.321983399304589 0.22377768121858377 KLSS(ph)GDLR ddPTM_A549_PD325901_60min_R1 1 KLSSGDLR 8 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KLS(0.156)S(0.844)GDLR 62.633 0.0042958 20057000.0 5951.0 6070.1 6125.1 5776.3 7224.7 6379.2 6290.8 6817.7 6914.8 7714.0 8018.7 True False 6555.141139105344 6581.648630017804 6540.786119218439 6133.08893207088 6717.261995861941 6327.2499102170195 6530.199836457846 6681.715625117818 6624.195002864741 7226.936723520524 7032.450734727382 0.9321275592781609 0.9358968698517226 0.9300863050371582 0.8721126053233039 0.9551808109640941 0.8997218962334188 0.9285809574478296 0.950126190308369 0.9419468763788691 1.027655506754244 1.0 12.779811825552443 -10.168177621029336 0.42480961718236665 1.0104894834401106 0.9198964307814932 0.6790791648572057 0.022952356247099317 0.6685991698533699 0.20822663302262165 0.025582619105191922 0.006473290354614086 6.789259035958824e-11 10.168177621029336 -0.09059305265861739 KLSS(ph)VR ddPTM_A549_PD325901_60min_R1 1 KLSSVR 6 1 Q96BN2;Q8IYB1 Q96BN2 TADA1;MB21D2 Transcriptional adapter 1;Protein MB21D2 1 KLS(0.025)S(0.975)VR 44.349 0.053278 15101000.0 4321.5 3756.2 4681.6 4243.4 4733.4 4637.3 4244.4 4774.0 4108.5 4895.8 4727.5 True False 4760.215498679842 4072.7481563850483 4999.321528747782 4505.505180539372 4400.942313343517 4599.535366291914 4405.922964624799 4678.7788248694515 3935.834032693609 4586.678352477545 4146.047470091623 1.1481333807725667 0.982320676684159 1.2058042183094693 1.0866988892531435 1.0614789977902161 1.1093783656534617 1.0626802988648445 1.1284913785046595 0.9492978701005157 1.1062773365631977 1.0 12.017520919313398 -8.763270959894927 24.999991755259032 0.9760573231363837 1.0954440056056154 0.14420239595177775 0.06714223458628614 27.063298825368616 369397.31928626134 0.00877890758840395 0.00958265635927805 1.7247614633831222e-09 8.763270959894927 0.11938668246923168 KLSSERPS(ph)SDGEGVVENGITTCNGK ddPTM_A549_MK2206_60min_R1 3 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KLS(0.125)S(0.125)ERPS(0.375)S(0.375)DGEGVVENGITTCNGK;KLS(0.017)S(0.013)ERPS(0.555)S(0.416)DGEGVVENGITTCNGK;KLS(0.012)S(0.012)ERPS(0.488)S(0.488)DGEGVVENGITTCNGK 160.78 3.4291e-41 81831000.0 4533.8 5089.8 5829.5 4954.6 6524.599999999999 6139.900000000001 5103.0 5483.5 8344.5 7249.9 7688.9 True False 5298.994599232261 5348.849079706468 6656.210757534554 6168.477222420443 5564.839983085353 6789.620142664234 6030.149045698095 6260.802917514454 6454.484073428329 5612.142554725775 5779.5339271554885 0.9168550035383676 0.9254810417453522 1.1516864234086328 1.0672966540498154 0.9628527236320246 1.1747694932220736 1.0433625136042677 1.083271245817538 1.116782798540475 0.9710372195164017 1.0 12.496737440347799 -5.723553999679126 17.233124263143743 1.0647221408645842 0.9211501153198668 0.4155527731882416 0.06506699492038114 4.570244339336833 2076.974437103705 0.00851210738834973 0.03294672400328128 1.8899312246902424e-06 5.723553999679126 -0.14357202554471737 KLSSERPS(ph)SDGEGVVENGITTCNGK ddPTM_A549_PD325901_60min_R1 1 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KLS(0.128)S(0.128)ERPS(0.372)S(0.372)DGEGVVENGITTCNGK 125.59 2.3803e-18 93983000.0 3358.0 4087.7 3612.6 3673.3 3697.5 3604.8 3910.8 4098.2 3520.5 4075.7 4759.6 True False 3698.901687971055 4432.184824784399 3857.77276032857 3900.191398330414 3437.8003556825206 3575.4437039676327 4059.6276340718764 4016.458186024293 3372.5456278685315 3818.359606436688 4174.1993735902915 0.8861344073245773 1.0618047745458334 0.9241946574800143 0.9343567590485743 0.8235831708071042 0.8565579609323596 0.9725524036433674 0.9622104328403646 0.807950298015534 0.9147525704198598 1.0 12.027283794700008 -5.978711267249058 24.773030682914456 0.9080059041669021 0.9787271563568738 0.11507669174239843 0.06846877268526509 374.0626619486214 435279.2414195916 0.011285458852151792 0.03508295694306056 1.0502404297598908e-06 5.978711267249058 0.07072125218997172 KLSSERPS(ph)SDGEGVVENGITTCNGKEQVK ddPTM_A549_MK2206_60min_R1 1 KLSSERPSSDGEGVVENGITTCNGKEQVK 29 3 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KLS(0.106)S(0.106)ERPS(0.394)S(0.394)DGEGVVENGITTCNGKEQVK 113.32 1.1716e-16 3511000.0 918.48 1191.6 1599.2 1252.9 1733.2 1030.6 1016.4 1106.9 1816.5 1697.2 1801.3 True False 1073.4969693199625 1252.2473502648884 1825.9906069901806 1559.8605562448192 1478.248575956156 1139.6574079430866 1201.066723505299 1263.80646473908 1405.065650354433 1313.801341243408 1353.987496649089 0.79284112443926 0.9248588730427778 1.3486022666451696 1.1520494540054722 1.0917741704517907 0.8417045288553724 0.8870589473519914 0.933395964044577 1.0377242432679434 0.970320142907423 1.0 10.402998701118836 KLSSERPSS(ph)DGEGVVENGITTCNGK ddPTM_A549_MK2206_60min_R1 1 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KLS(0.035)S(0.035)ERPS(0.162)S(0.767)DGEGVVENGITTCNGK 106.81 1.1399e-12 62663000.0 1729.5 1859.3 1933.1 1981.8 2722.8 1897.7 1965.3 1770.3 2919.3 2685.2 3672.8 True False 2021.3973177846817 1953.9304282876026 2207.242647806851 2467.341088966384 2322.2797268713493 2098.5133544086907 2322.3695707447505 2021.2454463163738 2258.083211164159 2078.6114550476077 2760.7423958767413 0.7321933842156749 0.7077554324539158 0.7995105414773359 0.8937237652638067 0.8411794343216339 0.7601264636435796 0.8412119776960303 0.7321383731184662 0.8179260819613883 0.7529175696189843 1.0 11.430840561385748 -10.468389131964665 0.5631160594350351 1.022947818512042 0.7878988864103316 0.0 0.09046197047314022 0.5236473705489025 0.2640838834897633 0.06198632445077183 0.01315592887548843 3.40103317347065e-11 10.468389131964665 -0.2350489321017104 KLSSERPSS(ph)DGEGVVENGITTCNGK ddPTM_A549_PD325901_60min_R1 3 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KLS(0.005)S(0.007)ERPS(0.135)S(0.853)DGEGVVENGITTCNGK;KLS(0.005)S(0.005)ERPS(0.148)S(0.843)DGEGVVENGITTCNGK;KLSS(0.001)ERPS(0.119)S(0.879)DGEGVVENGITTCNGK 182.09 1.4780999999999998e-57 140214000.0 7532.7 7132.1 7652.0 6854.6 7879.6 7483.6 7724.5 8708.4 6971.1 8867.2 9497.6 True False 8297.41415871935 7733.1470971071285 8171.310735214029 7277.993074073898 7326.164079144285 7422.656042779675 8018.460074508587 8534.70413039236 6678.1289096532655 8307.323478714181 8329.455410246897 0.9961532597331477 0.9284096878163018 0.9810138037550067 0.8737657764660712 0.8795489882965982 0.8911334147546216 0.9626631849957773 1.0246413132715695 0.8017485634700475 0.9973429317473157 1.0 13.024006458209715 -6.245339564684064 24.153798768892486 0.9122271254731197 0.9645139970613751 0.02390617727768618 0.06599168512476036 1143.06653640845 1714882.41794787 0.011037669665560388 0.029095892364830067 5.684083318933617e-07 6.245339564684064 0.0522868715882554 KLSSGET(ph)VTYQK ddPTM_A549_PD325901_60min_R1 1 KLSSGETVTYQK 12 1 E2QRF0;Q70EL2-3;Q70EL2 E2QRF0 USP45 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 45 1 KLS(0.361)S(0.212)GET(0.421)VT(0.005)YQK 74.257 0.00082814 6088800.0 2564.5 2654.2 3172.8 2329.0 2896.9 2699.2 2903.4 2936.4 3031.9 3392.1 3462.4 True False 2824.84615211488 2877.878748915709 3388.125287596324 2472.857040457229 2693.431737762459 2677.2186101169073 3013.890475801443 2877.8311984387624 2904.4797867162624 3177.922227100593 3036.546749961974 0.9302824506654657 0.9477472227133497 1.1157823562699152 0.8143648835599834 0.8870048642577916 0.8816655334387437 0.9925388027828602 0.9477315633209997 0.9565075152400122 1.04655797811787 1.0 11.568215865415727 -9.791339591215527 0.6275030593468877 0.9975913168985612 0.9381701847260245 0.14256907821471143 0.07288210574399438 1.4018653962561398 1.157360055147133 0.037459517589172014 0.017090698503769576 1.616815294447228e-10 9.791339591215527 -0.05942113217253664 KLSSS(ph)DAPAQDTGSSAAAVETDASR ddPTM_A549_PD325901_60min_R1 1 KLSSSDAPAQDTGSSAAAVETDASR 25 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YIM6 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KLS(0.15)S(0.132)S(0.718)DAPAQDTGSSAAAVETDASR 262.43 9.515499999999997e-138 179800000.0 17835.0 20729.0 20859.0 19343.0 22204.0 21463.0 21020.0 25279.0 34361.0 46482.0 51862.0 True False 19645.59607056694 22475.90557843181 22274.617175356703 20537.773178859676 20644.467639641578 21288.21244403498 21819.927602585358 24774.79051400814 32916.92666359624 43547.118587332254 45483.30278030497 0.4319298483107038 0.494157288598757 0.4897317436015659 0.45154533473661623 0.4538911287810211 0.46804456015127227 0.4797348976168404 0.5447007802770215 0.7237145205261967 0.9574308795839884 1.0 15.473049399209703 -9.301217615324854 0.6077786238693266 0.975178049984338 0.44973797946580546 0.9696577003647805 0.03451941780298649 0.0878052934107839 0.0728617655231813 0.0175486736243978 0.011738913616013591 4.997840415343538e-10 9.301217615324854 -0.5254400705185325 down KLSSS(ph)SEPYEEDEFNDDQSIKK ddPTM_A549_MK2206_60min_R1 1 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 KLS(0.039)S(0.343)S(0.596)S(0.022)EPYEEDEFNDDQSIKK 232.0 1.4856999999999997e-88 18413000.0 3176.8 4723.1 3823.8 3842.8 5514.9 4634.4 4494.9 4086.6 7308.6 6547.6 6700.6 True False 3712.9661746969505 4963.485616008804 4366.072338049679 4784.28617250985 4703.665515543855 5124.809131934251 5311.565147071987 4665.8880646876205 5653.213769435954 5068.4926124943095 5036.656092847883 0.7371887431364255 0.9854724095728946 0.866859332375216 0.9498933586717582 0.9338865764972758 1.0175022946695818 1.0545816607598995 0.9263860741481321 1.1224140908615126 1.0063209635638286 1.0 12.298250510579493 -3.511166292159274 0.33458083543715517 1.0536108374496118 7.666433014182516e-11 0.5426959035626662 0.06547210262763566 10.232365569918437 0.3166840278822895 0.020113574462780115 5.619206002032863 0.00030820076178786197 3.511166292159274 -1.0536108373729476 KLSSWDQAET(ph)PGHT(ph)PSLR ddPTM_A549_MK2206_60min_R1 2 KLSSWDQAETPGHTPSLR 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 KLSSWDQAET(0.999)PGHT(0.962)PS(0.038)LR;KLS(0.002)S(0.002)WDQAET(0.995)PGHT(0.846)PS(0.154)LR 78.236 0.00018964 24411000.0 1973.8400000000001 1677.08 1359.76 1299.04 3159.0 1963.23 2129.9 1889.63 3544.4 3058.0 3442.8 True False 2306.975936245225 1762.4362086121512 1552.5944145578837 1617.3048583161226 2694.3152847019956 2170.9776955133957 2516.875260127839 2157.4908392491725 2741.599059243739 2367.195676126763 2587.857743553814 0.8914616508545543 0.6810406070435152 0.5999535401145197 0.6249589500600349 1.041137323492128 0.8389092101067612 0.9725709484600581 0.8336976190531888 1.0594087198467088 0.9147317629894046 1.0 11.337542598163203 -7.230882301663748 0.8493057179199408 1.0167544125399177 0.6968900921673588 0.3884485488338798 0.12134756815593913 0.3376194279355045 0.47651900052207213 0.020748955811355843 0.052869836888112816 5.8764858985099786e-08 7.230882301663748 -0.31986432037255896 KLSSWDQAET(ph)PGHT(ph)PSLR ddPTM_A549_PD325901_60min_R1 4 KLSSWDQAETPGHTPSLR 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 KLSSWDQAET(1)PGHT(0.978)PS(0.022)LR;KLS(0.01)S(0.011)WDQAET(0.979)PGHT(0.864)PS(0.135)LR;KLS(0.001)S(0.001)WDQAET(0.999)PGHT(0.865)PS(0.135)LR;KLS(0.001)S(0.001)WDQAET(0.998)PGHT(0.898)PS(0.102)LR 87.102 3.9953e-06 41657300.0 5847.1 6222.34 5819.599999999999 6210.9 6973.9 6944.5 6501.500000000001 6698.0 7532.0 6474.5 8930.9 True False 6440.693287592481 6746.718429104127 6214.553052097699 6594.533187022671 6484.077322648905 6887.946294441634 6748.918140257315 6564.403135520653 7215.456233235556 6065.698965054915 7832.455917639613 0.8223082715457462 0.8613796872970229 0.7934360713223797 0.8419496076793749 0.827847279426878 0.8794107961628188 0.861660532944457 0.838102787241591 0.9212252592428256 0.7744312931776923 1.0 12.935249029554402 -9.26051726989284 0.4814880019382838 1.0014283342654229 0.8267267556216307 0.0 0.06992240417226171 0.1902444300623835 0.10462561612442095 0.012455446916864918 0.007853249159393613 5.488867284739536e-10 9.26051726989284 -0.1747015786437922 KLSSWDQAET(ph)PGHTPSLR ddPTM_A549_MK2206_60min_R1 2 KLSSWDQAETPGHTPSLR 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 KLSSWDQAET(1)PGHTPSLR;KLSSWDQAET(0.986)PGHT(0.011)PS(0.003)LR 121.33 1.0302000000000001e-10 16857900.0 4469.3 4668.5 3940.1000000000004 4131.0 5758.6 4212.8 4716.700000000001 4418.0 5983.5 5449.1 7159.6 True False 5223.60857610586 4906.106709224259 4498.865426839675 5143.095185447634 4911.517568371293 4658.595699769685 5573.663336046287 5044.265029557555 4628.24680368607 4218.144525435692 5381.673725092337 0.9706289981405803 0.911632135249909 0.8359602712188734 0.9556683381728778 0.912637558362389 0.8656406794133091 1.0356747028454714 0.9373041338493643 0.8600013750567274 0.7837978927946471 1.0 12.393839211972637 KLSSWDQAET(ph)PGHTPSLR ddPTM_A549_PD325901_60min_R1 4 KLSSWDQAETPGHTPSLR 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 KLSSWDQAET(1)PGHTPSLR;KLSSWDQAET(1)PGHTPSLR;KLSSWDQAET(1)PGHTPSLR;KLSSWDQAET(1)PGHTPSLR 140.48 4.6403999999999994e-15 61546000.0 10837.5 10856.9 10685.7 11148.6 13447.6 12386.3 10391.5 12294.099999999999 14859.900000000001 12817.6 14587.000000000002 True False 11937.715021854172 11771.84906529386 11410.895860334107 11837.223701692332 12503.086967701493 12285.430079464672 10786.95421894699 12048.884530965124 14235.390079694242 12008.294548534695 12792.891474611639 0.9331522154741465 0.9201867371935338 0.8919715986788291 0.925296968647323 0.9773464421639718 0.9603325490445956 0.8431990719497959 0.9418421593645935 1.1127578239794607 0.9386693049312558 1.0 13.643054761409374 -8.653544209604576 6.737074137510508 1.0530528315266163 0.9221777297471658 0.3273927624688726 0.05337629426043954 0.111935310705058 6.352534250577381 0.008634714034145742 0.009784772238364027 2.2205256304822365e-09 8.653544209604576 -0.1308751017794505 KLSVPT(ph)S(ph)DEEDEVPAPKPR ddPTM_A549_PD325901_60min_R1 2 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 2 KLS(0.029)VPT(0.978)S(0.993)DEEDEVPAPKPR;KLS(0.076)VPT(0.956)S(0.968)DEEDEVPAPKPR 67.449 0.00079898 14994000.0 2756.0 3036.5 2795.6000000000004 2780.6000000000004 3430.2 3805.2 3304.6 3590.9 3760.6 3567.2000000000003 3348.7 True False 3035.7870911400323 3292.396511597678 2985.326227308463 2952.351346799215 3189.274585547581 3774.211712810038 3430.358361346504 3519.2766824934474 3602.5550598387713 3341.9663832178394 2936.83112915829 1.0336948083256334 1.1210711024236844 1.0165127295433127 1.0052846816716265 1.0859577705653245 1.2851306550580406 1.1680475350755566 1.198324495934531 1.226681038644289 1.137949795627392 1.0 11.520044596245786 -7.004362283878722 24.85592641595622 1.1354445427864674 1.04740725253979 0.3366941181772791 0.07534258176428857 279.0158996559754 1589831.464391341 0.014940725540491022 0.027765386345559168 9.900057479794052e-08 7.004362283878722 -0.0880372902466775 KLSVPT(ph)SDEEDEVPAPK ddPTM_A549_MK2206_60min_R1 1 KLSVPTSDEEDEVPAPK 17 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLS(0.067)VPT(0.466)S(0.466)DEEDEVPAPK 91.637 3.2487e-06 2720900.0 1719.3 1734.1 1736.0 1536.2 2403.1 1981.6 1653.4 1853.7 2385.2 2007.2 2206.4 True False 2009.475807150741 1822.3582830600385 1982.1909040363626 1912.5690689626397 2049.60717336732 2191.2915967203767 1953.8013780437439 2116.4676517181606 1844.9560083817182 1553.772125939058 1658.489986457864 1.2116297496872432 1.0988057196246073 1.1951780958713207 1.1531990452637146 1.2358272827108159 1.3212570558839785 1.178060400724272 1.276141350867259 1.1124312015426159 0.9368595159609868 1.0 10.695654586187363 -9.39043678049444 1.131454719558371 1.0261118396627944 1.2054634673284619 0.634010450106081 0.06596104410362347 0.20724592376026055 0.5537189103824968 0.016166378534771556 0.012799134475503347 4.0697077153726027e-10 9.39043678049444 0.17935162766566748 KLSVPT(ph)SDEEDEVPAPKPR ddPTM_A549_PD325901_60min_R1 1 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLSVPT(0.681)S(0.319)DEEDEVPAPKPR 247.02 1.9751999999999998e-86 206080000.0 15863.0 12984.0 14310.0 14927.0 16918.0 17470.0 16692.0 16935.0 16706.0 15357.0 18653.0 True False 17473.400082276603 14078.207247351967 15281.162653020494 15849.00688832333 15729.738043931542 17327.730112160036 17327.22319421288 16597.2181397495 16003.904916679914 14387.356399157987 16358.799251109262 1.0681346359263968 0.8605892786658745 0.9341249573671677 0.9688368103941759 0.9615460036203413 1.0592299499601154 1.0591989624811826 1.014574351392207 0.9783056000026846 0.8794873131157475 1.0 13.99777923675056 -7.024935790835534 23.87456704534428 1.0020611998517484 0.9512596122128684 0.08352464342702781 0.06379365777372728 557.8937292817945 534150.7652197384 0.007504803108758345 0.013042336871859095 9.442004632341062e-08 7.024935790835534 -0.050801587638879986 KLSVPTS(ph)DEEDEVPAPK ddPTM_A549_PD325901_60min_R1 2 KLSVPTSDEEDEVPAPK 17 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLS(0.006)VPT(0.191)S(0.803)DEEDEVPAPK;KLS(0.002)VPT(0.106)S(0.892)DEEDEVPAPK 140.95 1.571e-16 10055300.0 4534.1 4604.299999999999 5017.1 5310.1 5845.8 6137.7 5596.6 5701.0 6399.1 4788.0 6225.4 True False 4994.398494171998 4992.3205197922525 5357.5905762731745 5638.092816887907 5435.21117491518 6087.71660614795 5809.58167557703 5587.289082652019 6130.168080469683 4485.684862874811 5459.715266062062 0.914772703480985 0.9143921022447516 0.9812948689057649 1.0326715848964965 0.9955118371649889 1.115024558879395 1.0640814387683841 1.0233663864090063 1.1227999596563576 0.821596849703521 1.0 12.414609998636589 -6.058015077956467 1.0875289139904412 1.0590317460025382 0.8960943083078342 0.11105200896385636 0.08080740816130312 0.38003943642307286 0.7048519010680878 0.007433809540814958 0.05107642063720394 8.749533978249908e-07 6.058015077956467 -0.16293743769470403 KLSVPTS(ph)DEEDEVPAPKPR ddPTM_A549_MK2206_60min_R1 2 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLSVPT(0.034)S(0.966)DEEDEVPAPKPR;KLSVPT(0.025)S(0.975)DEEDEVPAPKPR 223.97 2.2489999999999994e-75 274590000.0 17919.0 20728.0 20984.0 17247.4 27686.0 21102.0 19735.1 19759.8 29479.0 27456.0 30274.0 True False 20943.28912251154 21782.966663553703 23959.846734043236 21473.0137742652 23613.42607542243 23334.999633626052 23320.712214727886 22560.812161849542 22802.053568289735 21253.670530979845 22756.130280105775 0.9203361408429321 0.9572351008465245 1.0528963597554104 0.9436144682752884 1.0376731801393373 1.0254379521647556 1.0248101029337 0.9914169010349274 1.0020180622811827 0.9339756043478343 1.0 14.47396762522739 -5.549345341409125 8.53673890556962 1.0048241508152744 0.9293486822298229 0.3415675267427766 0.034737658347434176 0.10237390248594924 29.54476304381044 0.0033394368001197126 0.013267303725343073 2.822634585422148e-06 5.549345341409125 -0.07547546858545151 KLSVPTS(ph)DEEDEVPAPKPR ddPTM_A549_PD325901_60min_R1 1 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLSVPT(0.02)S(0.98)DEEDEVPAPKPR 264.8 1.8312999999999997e-111 265190000.0 8126.8 7423.1 7424.0 7515.1 9182.6 9892.8 9275.9 9453.6 8567.2 8265.7 10172.0 True False 8951.826753366047 8048.670688371718 7927.837284138656 7979.290658969569 8537.645854250253 9812.236316747387 9628.899450467243 9265.040531794268 8207.150377240527 7743.80229136681 8920.908485620734 1.003465820526592 0.9022254517401516 0.8886804855040527 0.8944482136355371 0.9570377129203549 1.0999144686399764 1.0793631014136835 1.0385758969199412 0.9199904236737003 0.8680508609463649 1.0 13.122974923166382 -6.996184073248911 23.35889535912832 0.987765579071176 0.9193031956994332 0.21299723507835622 0.06845997615612202 69.28400985507707 424098.1186509637 0.010051529751366955 0.018919979352678824 1.0088252106148345e-07 6.996184073248911 -0.06846238337174282 KLT(ph)ASPSDPK ddPTM_A549_PD325901_60min_R1 1 KLTASPSDPK 10 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KLT(0.651)AS(0.299)PS(0.05)DPK 53.528 0.012968 6960500.0 1824.7 1879.2 2073.1 1971.6 2788.7 2281.6 2471.7 2310.6 2485.1 2627.3 2402.3 True False 2009.9422007268577 2037.5667790529747 2213.793032563018 2093.38125417152 2592.831332492725 2263.0194060620684 2565.761896066139 2264.5132703693657 2380.6598891680383 2461.411829622176 2106.8323294343977 0.9540114667152695 0.9671233683792871 1.0507684933605206 0.9936154979800939 1.2306775894163342 1.0741336054348476 1.2178291837561397 1.0748426624805494 1.129971215985257 1.1682998192281249 1.0 11.04085978765506 -5.939401431155546 1.5684132388877339 1.0848869888904171 0.9509865903596617 0.34137622300926895 0.07556026974649316 0.47681996967577245 2.080770089150734 0.011599504683048049 0.06570860472650472 1.1497371617793512e-06 5.939401431155546 -0.13390039853075542 KLT(ph)GMER ddPTM_A549_MK2206_60min_R1 2 KLTGMER 7 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 KLT(1)GMER;KLT(1)GMER 61.353 0.017349 7397100.0 1991.7 2757.3999999999996 2515.8 1756.6 2345.66 1775.36 2000.34 2084.14 3014.7 3273.2 3471.4 True False 2327.8502676101484 2897.7398821923493 2872.578269801085 2186.9670788567696 2000.6165212770125 1963.2274168114093 2363.7758851796434 2379.5732274110633 2331.8752634866546 2533.781846663871 2609.3555742339704 0.892116923655963 1.110519359954628 1.1008765145564299 0.8381253595531144 0.7667090453413327 0.752380180070995 0.9058849274973105 0.9119390438421316 0.8936594485292501 0.9710373977711774 1.0 11.349477836801524 -3.502499390334071 16.295892699780524 0.9309993877870126 1.016550677256121 0.0 0.11235967343142317 0.0 0.0 0.015739730926441497 0.0 0.0003144130834010708 3.502499390334071 0.0855512894691084 KLT(ph)GMER ddPTM_A549_PD325901_60min_R1 2 KLTGMER 7 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 KLT(1)GMER;KLT(1)GMER 71.34899999999999 0.012708 18779500.0 3452.5 3402.0 3734.5 3628.8 4064.3999999999996 3810.2 4137.2 4123.7 4121.1 4191.2 4281.9 True False 3802.9952584038333 3688.698479320036 3987.945627372817 3852.9427343972475 3778.930565418809 3779.1709944677846 4294.643409962709 4041.4495685199336 3947.904498511289 3926.566916725332 3755.253445200491 1.0127133398317922 0.9822768378082396 1.0619644414333005 1.0260140335725172 1.0063050658401176 1.0063690905597495 1.1436361014332068 1.0762121991220654 1.0513017446417687 1.0456196829387887 1.0 11.874694564384269 KLT(ph)LER ddPTM_A549_PD325901_60min_R1 1 KLTLER 6 1 E5RFP0;Q8WVJ2 E5RFP0 NUDCD2 NudC domain-containing protein 2 1 KLT(1)LER 66.692 0.034386 5379100.0 1301.3 1408.3 1646.9 1844.9 2034.1 1508.2 1468.6 1713.9 1847.0 1978.8 1893.3 True False 1433.4070180335723 1526.9823834292797 1758.6685376142177 1958.8552829280975 1891.231833264048 1495.9177192421162 1524.4883766487565 1679.7149199714609 1769.3770131155172 1853.8582302958787 1660.4361026175516 0.8632714115128639 0.9196273081644682 1.0591606234300797 1.1797233749857106 1.1389970564255165 0.9009185700575381 0.9181252890403407 1.0116106951201058 1.0656098180027695 1.1164887509813908 1.0 10.697346490362994 -5.6266553138932105 4.318405070121297 1.0324617158838647 0.8754761253081865 0.3382718329965587 0.08210748343682583 0.18494869282508516 5.931095490422837 0.011485830500643418 0.05017148010513018 2.362352415436718e-06 5.6266553138932105 -0.15698559057567818 KLT(ph)LQSAK ddPTM_A549_PD325901_60min_R1 1 KLTLQSAK 8 1 P35240;A0A5K1VW66 P35240 NF2 Merlin 1 KLT(0.945)LQS(0.055)AK 99.5 0.0014869999999999998 60062000.0 14132.0 15483.0 16399.0 16033.0 18922.0 18141.0 18354.0 19590.0 19072.0 18289.0 20206.0 True False 15566.670236571457 16787.806747593222 17511.934755197977 17023.321996415085 17592.983997356238 17993.26571062939 19052.471513694178 19199.262081942303 18270.47016466656 17134.229418779734 17720.790096387387 0.8784410938734004 0.947350916989623 0.988214106704419 0.9606412526654503 0.9927877877715393 1.0153760420816422 1.075147970833325 1.0834314936023266 1.0310189368131635 0.9668998574884519 1.0 14.113155308652795 -4.914978224725461 0.6199472075875307 1.0239215871136018 0.7287846116690497 0.6262628240054856 0.03391596354627087 2.2807594022262005 0.4434327323967578 0.005795846540411183 0.5270114642866172 1.2162469810389012e-05 4.914978224725461 -0.2951369754445521 KLT(ph)PDHNK ddPTM_A549_MK2206_60min_R1 4 KLTPDHNK 8 1 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5;Q5TBH9;Q8NDD1-7 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 KLT(1)PDHNK;KLT(1)PDHNK;KLT(1)PDHNK;KLT(1)PDHNK 86.014 0.0010937000000000002 166638200.0 10943.099999999999 12231.1 11334.7 9853.7 14237.9 10126.5 10153.800000000001 9899.900000000001 13478.0 16772.0 17085.7 True False 12790.027746891903 12853.610746747965 12942.130898606554 12267.856942349406 12143.523770832082 11198.079508573333 11998.614027083933 11303.241142172206 10425.25451994332 12983.193551340108 12842.849148668929 0.9958870963003953 1.0008379447546616 1.0077305081441306 0.955228610126662 0.9455474895218771 0.8719310940231619 0.9342641876571061 0.8801194354403601 0.8117555847040238 1.0109278245852265 1.0 13.64867767520871 -6.674822094154401 1.7281588687784832 0.9060996219987953 1.0016665715323068 0.27547028303843424 0.05414111312064199 0.3808210854250893 2.2898633945421363 0.0102447032094176 0.026333093372726143 2.1143549939170088e-07 6.674822094154401 0.09556694953351141 KLT(ph)PDHNK ddPTM_A549_PD325901_60min_R1 3 KLTPDHNK 8 1 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5;Q5TBH9;Q8NDD1-7 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 KLT(1)PDHNK;KLT(1)PDHNK;KLT(1)PDHNK 102.52 0.00084245 132478000.0 7181.9 7633.1 7800.200000000001 8054.6 7564.5 8462.1 7440.2 7654.299999999999 8332.1 8087.9 9510.8 True False 7911.001200964661 8276.368125366778 8329.568478413032 8552.114348676165 7033.195616108298 8393.18746320031 7723.340882433659 7501.628981817811 7981.930812658248 7577.22861371035 8341.031893928593 0.9484439457332671 0.9922475097345109 0.9986256597910977 1.0253065157203411 0.8432044986217755 1.006252891720709 0.9259454921944911 0.8993646202549854 0.95694764318888 0.9084282028972682 1.0 13.026010159478721 -10.410926046655424 1.053589817027761 0.9970799039730459 0.9561383802064277 0.0 0.05651162873758796 0.8881379353626572 1.9172905930246178 0.02241740919183451 0.00878434824905921 3.882164673644832e-11 10.410926046655424 -0.04094152376661819 KLT(ph)PSAGK ddPTM_A549_MK2206_60min_R1 2 KLTPSAGK 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KLT(0.983)PS(0.017)AGK;KLT(0.978)PS(0.022)AGK 92.866 0.0015897 296860000.0 18806.1 21372.0 19583.0 18717.4 25958.0 21419.4 20640.2 19187.9 28284.0 29119.0 29253.0 True False 21980.10991499885 22459.743512807294 22360.16386736411 23303.163840256017 22139.61258635466 23685.98669095299 24390.257168923723 21907.843585479255 21877.719160266875 22540.997675976192 21988.672758272256 0.9996105793483973 1.0214233373570862 1.0168946581349299 1.0597803740332277 1.0068644356001715 1.077190376669833 1.1092191619318168 0.9963240540399333 0.9949540566079124 1.025118611012852 1.0 14.424472904940759 KLT(ph)PSAGK ddPTM_A549_PD325901_60min_R1 4 KLTPSAGK 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KLT(0.836)PS(0.164)AGK;KLT(0.924)PS(0.076)AGK;KLT(0.839)PS(0.161)AGK;KLT(0.928)PS(0.072)AGK 87.29799999999999 0.0060539999999999995 495713000.0 16434.0 15976.899999999998 16407.8 16506.8 19198.800000000003 17046.7 16850.2 17956.1 18653.0 17794.3 18682.699999999997 True False 18102.36758192862 17323.32943393542 17521.33197611668 17526.38754633721 17850.342520264385 16907.877327015383 17491.443581783253 17597.951499212053 17869.079277554796 16670.76486120577 16384.846339393072 1.104823762576657 1.0572775035604705 1.0693619954183655 1.069670546998027 1.0894421681177389 1.0319216290948559 1.0675378468292167 1.074038238424146 1.0905857099552576 1.0174501802391203 1.0 14.000074522589713 -10.840380318450908 0.997186035697467 0.9984026128298592 1.07247604151594 0.6329167606922177 0.01866492033306873 0.25715335184132915 0.43771263506489116 0.013934991317022244 0.003133003658253385 1.4441745306722001e-11 10.840380318450908 0.0740734286860808 KLTAS(ph)PSDPK ddPTM_A549_PD325901_60min_R1 1 KLTASPSDPK 10 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KLT(0.137)AS(0.656)PS(0.207)DPK 41.577 0.03648 8154300.0 6079.6 8665.5 7609.2 7111.9 7746.8 7366.3 6943.0 7712.9 7781.0 7262.2 9355.5 True False 6696.796516435033 9395.772096574894 8125.606069836721 7551.185910703206 7202.691493009159 7306.311295088977 7207.219664355378 7559.060158847 7453.991629156377 6803.663452625194 8204.832809400781 0.8162014597984375 1.1451509512551652 0.9903438934827185 0.9203339161343237 0.8778596298460333 0.8904887478898641 0.8784115205976681 0.9212936246776559 0.9084879365994979 0.8292263365598161 1.0 13.002258220776957 KLTASPS(ph)DPK ddPTM_A549_MK2206_60min_R1 2 KLTASPSDPK 10 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KLT(0.246)AS(0.345)PS(0.409)DPK;KLT(0.002)AS(0.041)PS(0.957)DPK 78.763 0.00054709 22905000.0 9429.2 12932.6 11278.2 10262.5 13572.4 11314.4 9678.7 10627.7 17047.0 16506.0 16969.6 True False 11020.61843819331 13590.81410039921 12877.618349022412 12776.812960701123 11575.917939249564 12511.68229810913 11437.194506877933 12134.209020966233 13185.881718465194 12777.283136085129 12755.579982865927 0.863984111502329 1.06547990123971 1.0095674494080562 1.0016646030885086 0.907517961143205 0.9808791379863232 0.8966424515577551 0.951286341919822 1.0337343920211606 1.0017014634574324 1.0 13.638840877814129 -8.757476874220785 24.985934995280093 1.0159301303729604 0.9630939100678427 0.15058082745581036 0.054511521816254356 132.50785801042215 835539.1789513748 0.009092041700141655 0.010125392080186266 1.7479263353997978e-09 8.757476874220785 -0.0528362203051177 KLTASPS(ph)DPK ddPTM_A549_PD325901_60min_R1 1 KLTASPSDPK 10 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KLT(0.165)AS(0.35)PS(0.484)DPK 43.03 0.029994 9024600.0 2366.1 2561.2 2336.0 2207.1 3188.9 2351.5 2744.7 2795.3 2916.1 2321.1 2291.2 True False 2606.304730169243 2777.041312532183 2494.5350075091455 2343.427554312214 2964.922665107774 2332.3501636373403 2849.151060457469 2739.5455486295727 2793.5464580109137 2174.5453498785964 2009.3969251134708 1.297058185764898 1.3820272529656445 1.241434669443559 1.1662342691103105 1.4755286165974124 1.160721475427575 1.4179135166620092 1.3633670453013509 1.3902412326291194 1.082188054884079 1.0 10.97254685885317 -10.786565614883276 0.9830448628733428 0.9958522254792772 1.3235413226581525 0.5443331555973525 0.09809031703133439 0.2901206160344634 0.48762984848357405 0.06762531013325888 0.01616824517277979 1.6346861577902353e-11 10.786565614883276 0.3276890971788753 KLTPQGQR ddPTM_A549_MK2206_60min_R1 2 KLTPQGQR 8 1 P39019;A0A075B6E2 P39019 RPS19 40S ribosomal protein S19 0 ; 56.729 0.018359 6589700.0 2977.4 3493.0 2560.2 2636.7 4196.0 3546.2 2810.9 3402.1000000000004 4441.1 4806.0 4453.700000000001 False True 3479.9123295588984 3670.7787801907116 2923.2748574388816 3282.69161836596 3578.7739584075903 3921.456530222954 3321.6041451210585 3884.3580934942847 3435.197940979393 3720.3212620880395 3347.723374133156 1.0394862241149094 1.096500030006573 0.8732127869423563 0.9805743341072692 1.0690172270683092 1.1713800968511496 0.9921979130014407 1.1602984056291934 1.0261295683873184 1.11129888772586 1.0 11.708964606082512 KLTPQGQR ddPTM_A549_PD325901_60min_R1 1 KLTPQGQR 8 1 P39019;A0A075B6E2 P39019 RPS19 40S ribosomal protein S19 0 66.62100000000001 0.0084791 6580700.0 2924.7 2242.3 1723.9 1576.3 2766.7 2606.2 2025.0 2259.5 2556.1 2846.7 2537.8 False True 3221.6133909496575 2431.2664903525333 1840.8942206528322 1673.6644709629586 2572.3765365968443 2584.975971282857 2102.0624831225186 2214.432499956541 2448.6760060771894 2666.9588761791374 2225.6666884396677 1.4474824140034244 1.0923767260303492 0.8271203546400808 0.7519834302486248 1.1557779742842995 1.1614389453324152 0.9444641886589931 0.9949524389516732 1.1001988836854386 1.1982741575958273 1.0 11.120021838285258 -7.534074091671699 0.005263633735999214 7.473498778654258e-06 2.1007331888093868 0.0 0.18191452790236512 48025.069610300954 101.84842413218072 20056.466223624764 20587.98397296919 2.92365355304335e-08 7.534074091671699 2.1007257153106083 KLTS(ph)DEEGEPSGK ddPTM_A549_MK2206_60min_R1 6 KLTSDEEGEPSGK 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.203)S(0.797)DEEGEPSGK;KLT(0.02)S(0.98)DEEGEPSGK;KLT(0.332)S(0.668)DEEGEPSGK;KLT(0.036)S(0.964)DEEGEPSGK;KLT(0.202)S(0.798)DEEGEPSGK;KLT(0.288)S(0.712)DEEGEPSGK 211.7 1.6594999999999999e-37 692647000.0 44912.1 48026.200000000004 43223.49999999999 40245.5 57522.1 45791.200000000004 43730.2 49467.5 62003.3 64220.1 66852.9 True False 52492.16448457785 50470.52844351425 49353.242246898444 50105.649306689156 49060.67528906513 50636.79439026148 51675.41128712264 56479.669612865175 47959.6515489243 49712.73480720347 50251.47988382386 1.0445894251459702 1.0043590469414396 0.982125150562689 0.9970979844280836 0.9763030940081419 1.007667724559126 1.0283361088387997 1.1239404241116926 0.9543928190732289 0.9892790206802684 1.0 15.616878463196553 KLTS(ph)DEEGEPSGK ddPTM_A549_PD325901_60min_R1 4 KLTSDEEGEPSGK 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.016)S(0.984)DEEGEPSGK;KLT(0.184)S(0.816)DEEGEPSGK;KLT(0.286)S(0.714)DEEGEPSGK;KLT(0.016)S(0.984)DEEGEPSGK 262.42 1.3161999999999997e-82 998606000.0 32739.699999999997 32466.1 31288.5 32249.0 38140.3 35308.2 35033.799999999996 34789.2 33911.8 36211.4 37277.2 True False 36063.41024230672 35202.13218678787 33411.92576303505 34240.94748720703 35461.456904891995 35020.66172559639 36367.030430230974 34095.30211440055 32486.604977461182 33925.0060241238 32692.340719640284 1.1031149635804827 1.0767700143795396 1.0220108143851097 1.0473691003298642 1.084702291860923 1.071219158821422 1.112402159946384 1.042914069897645 0.993706913067393 1.0377050182810246 1.0 14.996665055024843 -8.61221948649117 4.028890402039537 0.9971027426057549 1.0717483754988923 0.5096920640254402 0.02635863855964313 0.09617231878670639 2.9793816651600924 0.004122652884775074 0.004691027227499517 2.4421959883044706e-09 8.61221948649117 0.07464563289313741 KLTS(ph)DEEGEPSGKR ddPTM_A549_MK2206_60min_R1 8 KLTSDEEGEPSGKR 14 2 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.064)S(0.936)DEEGEPSGKR;KLT(0.214)S(0.786)DEEGEPSGKR;KLT(0.055)S(0.945)DEEGEPSGKR;KLT(0.167)S(0.833)DEEGEPSGKR;KLT(0.035)S(0.965)DEEGEPSGKR;KLT(0.128)S(0.872)DEEGEPSGKR;KLT(0.081)S(0.919)DEEGEPSGKR;KLT(0.045)S(0.955)DEEGEPSGKR 153.75 2.6456e-15 667655000.0 42776.799999999996 45845.600000000006 43730.8 40028.00000000001 56699.1 41879.4 39477.9 37973.799999999996 62849.9 67362.8 67016.7 True False 49996.47804765064 48178.9452176099 49932.485015111415 49834.86179692521 48358.73749884358 46311.05031070418 46650.523419785364 43356.702439885135 48614.4980006667 52145.496694503556 50374.60382317384 0.9924937220975374 0.9564133821623452 0.9912233789547137 0.9892854338240902 0.9599824877748635 0.9193332909032169 0.9260722641817525 0.8606857255310014 0.9650596592543833 1.0351544773939254 1.0 15.62040896699472 -9.758654090394716 1.4623664469124513 0.9923791143195683 0.950544315124098 0.2594240928987539 0.03911675554138168 0.47199528428491233 2.03101778878563 0.010391354578776758 0.00734843269380674 1.7431947513441673e-10 9.758654090394716 -0.041834799195470285 KLTS(ph)DEEGEPSGKR ddPTM_A549_PD325901_60min_R1 4 KLTSDEEGEPSGKR 14 2 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.109)S(0.891)DEEGEPSGKR;KLT(0.166)S(0.834)DEEGEPSGKR;KLT(0.247)S(0.753)DEEGEPSGKR;KLT(0.138)S(0.862)DEEGEPSGKR 135.05 1.7307999999999999e-09 1120620000.0 37200.0 36350.0 38465.8 38561.9 45349.5 43274.7 43511.600000000006 47102.899999999994 45356.2 46694.5 50359.2 True False 40976.516614807406 39413.342070336104 41076.32050164611 40943.78098257088 42164.30756728183 42922.28519088108 45167.45774846116 46163.39570798979 43450.03664443419 43746.20130106677 44165.33765327086 0.9277981057566467 0.8924044095339816 0.9300578844007552 0.927056899326991 0.9546922950822084 0.9718545690254058 1.022690194356888 1.0452404116188379 0.983804018109127 0.9905098347601324 1.0 15.430626920790356 -7.055250484514801 1.556521669410718 0.9986906547091857 0.9155432728400287 0.8006402486812377 0.01968274865525008 0.1414120279270045 0.6765696720464157 0.0033242445135630958 0.0071159634500938505 8.805408640915646e-08 7.055250484514801 -0.08314738186915704 KLTS(ph)TPR ddPTM_A549_PD325901_60min_R1 1 KLTSTPR 7 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 KLT(0.032)S(0.484)T(0.484)PR 58.676 0.013453 39214000.0 3908.0 3473.6 4062.7 3740.6 3659.5 3818.9 4175.8 3806.4 3214.2 3691.5 3778.9 True False 4304.737283082453 3766.3324626002623 4338.4192529997445 3971.648366481026 3402.469344589639 3787.80014455226 4334.71235408544 3730.4783659369655 3079.118351681586 3458.4180600046698 3314.119256420778 1.2989083825943954 1.13645049293364 1.309071556370365 1.1984023685286371 1.026658693104568 1.1429281360994394 1.3079530393142502 1.1256319031699094 0.9290909932453694 1.0435406189153655 1.0 11.694409802595999 -8.624601672249277 4.630160902847121 0.9669245759642399 1.1965153167552973 0.5353546145657815 0.08520625666849355 0.1035602780012925 3.8468077423098914 0.014219704844210411 0.01613598714654737 2.3735496883291113e-09 8.624601672249277 0.22959074079105746 KLTST(ph)PR ddPTM_A549_MK2206_60min_R1 2 KLTSTPR 7 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 KLT(0.022)S(0.304)T(0.674)PR;KLT(0.015)S(0.112)T(0.872)PR 65.465 0.01544 37476000.0 6330.2 6195.0 6017.9 5496.799999999999 8562.4 7090.4 7217.4 6112.9 9491.8 10117.2 9986.3 True False 7398.583001468981 6510.299039015595 6871.328710484118 6843.516246760729 7302.8823025426955 7840.701421773401 8528.708156461184 6979.42229497111 7341.922455289952 7831.717493299435 7506.426102141121 0.985633229554957 0.8672967601930575 0.9153928403457074 0.9116876864755512 0.9728840600268659 1.0445318870903069 1.1361875865304887 0.9297929800415021 0.9780849575266922 1.0433350554221172 1.0 12.873910471769184 -6.881538306311721 4.115489978319302 1.0003352912743555 0.9159699044094758 0.3861050981221126 0.056459319028120174 0.20111518304233647 6.207750677890831 0.008069473663351872 0.015772331448793857 1.3135956260626987e-07 6.881538306311721 -0.08436538686487971 KLTST(ph)PR ddPTM_A549_PD325901_60min_R1 1 KLTSTPR 7 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 KLT(0.02)S(0.175)T(0.805)PR 64.485 0.015895 35008000.0 6353.2 6324.9 6232.9 6124.6 6842.7 6365.8 6563.2 6608.4 5958.9 5957.3 5327.1 True False 6998.172187021352 6857.921520238477 6655.9020754724925 6502.902632024191 6362.09235803348 6313.959035374261 6812.96616752085 6476.590277810487 5708.468155632946 5581.155061320818 4671.900471269189 1.4979283548650166 1.467908308923247 1.4246669243928307 1.3919180581896222 1.3617782307560857 1.3514755021437737 1.4582858109710564 1.3862860130774635 1.221872809735212 1.1946219949768357 1.0 12.18979382447594 -9.428151939850782 0.4630136888290671 0.986852770806824 1.4494741764982695 0.7372134913622526 0.07226026798888807 0.1893550591665078 0.09420540323671237 0.03442005435156872 0.018458333427174116 3.731195974123826e-10 9.428151939850782 0.4626214056914455 KLTVNGVCAST(ph)PPLTPIK ddPTM_A549_MK2206_60min_R1 1 KLTVNGVCASTPPLTPIK 18 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 KLT(0.003)VNGVCAS(0.454)T(0.542)PPLT(0.001)PIK 76.417 0.00027641 2380100.0 1484.3 1625.8 1843.2 1549.2 1941.2 1458.3 1826.7 2057.4 2490.2 2002.4 2594.9 True False 1734.8135523491196 1708.5462756467393 2104.593475990683 1928.7540695462317 1655.652051492091 1612.6163380588046 2158.5877448122083 2349.042750523248 1926.1736760322644 1550.0564492728029 1950.514714403332 0.889413209517778 0.8759463658644526 1.0789938986102365 0.9888436397344703 0.8488282806923401 0.8267645079273901 1.1066759603874747 1.2043194204981051 0.9875207102046838 0.7946909796817244 1.0 10.929639166550142 -7.765351022386868 24.99991416693014 1.0207426837820488 0.9235900899229768 0.16291779182332045 0.11302823109922759 131.9988561632026 843626.0689010238 0.015276527457559504 0.021532690318741162 1.7165204333765515e-08 7.765351022386868 -0.09715259385907205 KLVGYLDR ddPTM_A549_PD325901_60min_R1 1 KLVGYLDR 8 1 Q5BJH1;C9JIZ6;P07602;P07602-2;P07602-3 Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D 0 66.692 0.0084455 1599700.0 1280.5 1483.5 1291.8 1137.3 1459.4 1747.1 1578.8 1627.9 1673.9 1562.2 1669.5 False True 1410.4954173457224 1608.519751343702 1379.4693162244496 1207.5484380042963 1356.8967786566802 1732.8721968491584 1638.882097952509 1595.4302574371563 1603.5518041440505 1463.5624253932806 1464.1620838324632 0.9633464989434315 1.0985940485040977 0.9421561529674849 0.8247368589435964 0.9267394598178539 1.1835248405786762 1.1193310604401898 1.0896541271312647 1.0952010175995903 0.9995904425843258 1.0 10.515859554539391 -7.219831704502174 24.961751704817992 1.0645861537384986 0.9517892079168137 0.4039936907777083 0.07725562013717914 486.6844318807081 291977.5217351082 0.012426341594792127 0.021522893352212948 6.027931320226283e-08 7.219831704502174 -0.11279694582168498 KLVIIEGDLER ddPTM_A549_MK2206_60min_R1 2 KLVIIEGDLER 11 1 P06753-2;P06753-3;P06753-6;A0A087WWU8;J3KN67;P06753-5;A0A2R2Y2Q3;P06753-4;P06753;A0A494C0P6;P06753-7 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 102.66 0.00022873 5285800.0 1196.59 1424.1799999999998 1570.71 1400.48 1759.11 1592.2 1537.09 1398.01 1971.8600000000001 1606.31 1733.6499999999999 False True 1398.5451381832736 1496.6646788353887 1793.4602965892616 1743.5976628699366 1500.3472492789256 1760.6855471831786 1816.35935658477 1596.1821987260653 1525.236858413373 1243.4434553692543 1303.1368586941066 1.0732143203936209 1.1485092059595485 1.3762639623182138 1.3380004189408183 1.1513351335810165 1.3511133043597496 1.3938362225476237 1.2248768715863227 1.1704348996327494 0.9541925294134708 1.0 10.347772891968614 -9.658311610695574 0.8070586687141323 1.0226070894427604 1.2627557395568008 0.50454319768737 0.10255317995836558 0.3560170620726502 0.4912594847948617 0.03799675181189819 0.022542291632848904 2.196283451651136e-10 9.658311610695574 0.2401486501140404 KLVIIEGDLER ddPTM_A549_PD325901_60min_R1 2 KLVIIEGDLER 11 1 P06753-2;P06753-3;P06753-6;A0A087WWU8;J3KN67;P06753-5;A0A2R2Y2Q3;P06753-4;P06753;A0A494C0P6;P06753-7 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 108.56 0.00011919 7578300.0 3278.5 3447.6000000000004 3348.5 3657.7 4288.0 3912.5 3716.1000000000004 4134.5 3725.3999999999996 3580.3 3821.4 False True 3611.330906495862 3738.1413513532507 3575.7493461662543 3883.6278217605836 3986.8256727969297 3880.637897185242 3857.518219027946 4052.0341540474938 3568.8343934274735 3354.23924698218 3351.392025850479 1.0775614665907127 1.1153996078404544 1.0669445169604832 1.1588103664998843 1.1896028999428072 1.1579182224140003 1.1510196924959943 1.209060033201939 1.0648812093302675 1.0008495637364232 1.0 11.710544738936603 -9.06067931122834 2.783398182085561 1.0246830047135538 1.1405034012166866 0.6040680671094394 0.04304024680685235 0.1338313818158946 2.138603057332025 0.008832156871657924 0.00872660227881978 8.696023180850411e-10 9.06067931122834 0.1158203965031328 KLVIIES(ph)DLERAEER ddPTM_A549_MK2206_60min_R1 1 KLVIIESDLERAEER 15 2 H7BYY1;P09493-2;P09493-8;P09493-7;F5H7S3;H0YKJ4;H0YK48;A0A494BZZ2;B7Z596;P09493-5;P09493-6;A0A494C0V8;H0YL42;P09493-9;P09493-3;Q6ZN40;A0A0S2Z4G6;P09493-4;P09493-10;P09493;H0YKX5 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 1 KLVIIES(1)DLERAEER 46.159 0.007059899999999999 1078400.0 275.23 143.85 87.469 159.96 169.89 112.53 146.85 105.37 253.56 213.76 146.59 True False 321.6820952725517 151.17135056697225 99.87341946149577 199.15020718087726 144.8994060519221 124.43784990863146 173.530744142811 120.30652018209132 196.12906485211664 165.47146753723243 110.18765732181764 2.9194022551276912 1.371944501238068 0.9063938910126951 1.8073730944222974 1.315023928939012 1.1293265773424537 1.574865537217036 1.0918329975082437 1.7799549388666622 1.5017241636597383 1.0 6.783818819147695 -5.261925780139961 7.7087278203094325 1.3503610697276958 2.934386359569921 0.7130798025143508 0.2866052202023282 0.04363259714821787 27.6503562019709 0.044102525304451246 0.3607385835809235 5.471094545667132e-06 5.261925780139961 1.5840252898422251 KLVIIES(ph)DLERAEER ddPTM_A549_PD325901_60min_R1 1 KLVIIESDLERAEER 15 2 H7BYY1;P09493-2;P09493-8;P09493-7;F5H7S3;H0YKJ4;H0YK48;A0A494BZZ2;B7Z596;P09493-5;P09493-6;A0A494C0V8;H0YL42;P09493-9;P09493-3;Q6ZN40;A0A0S2Z4G6;P09493-4;P09493-10;P09493;H0YKX5 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 1 KLVIIES(1)DLERAEER 70.09100000000001 0.00041091 2328900.0 255.34 189.76 246.09 457.46 481.01 518.33 318.44 335.12 298.01 296.93 272.19 True False 281.2619288286268 205.75174116277796 262.791147259386 485.71626523295964 447.2255169944153 514.108892331764 330.55840845705404 328.4357687034458 285.4856760576908 278.1817891256093 238.71235555457196 1.1782462125816844 0.8619232996330646 1.1008694822221272 2.034734499203248 1.8734912818208742 2.1536752512763577 1.3847561752264859 1.3758641354798335 1.195940090300127 1.16534306939975 1.0 7.899129430831989 -8.793708421096126 1.5232887754128281 1.0713245959403501 1.5258578074483216 0.17476743141372342 0.3755819884475521 0.46321180319282473 2.1148364872623295 0.0824943922493023 0.08733593742770802 1.6080204918996568e-09 8.793708421096126 0.45453321150797144 KLVIIESDLER ddPTM_A549_PD325901_60min_R1 1 KLVIIESDLER 11 1 H7BYY1;P09493-2;P09493-8;P09493-7;F5H7S3;H0YKJ4;H0YK48;A0A494BZZ2;B7Z596;P09493-5;P09493-6;A0A494C0V8;H0YL42;P09493-9;P09493-3;Q6ZN40;A0A0S2Z4G6;P09493-4;P09493-10;P09493;H0YKX5 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 0 78.324 0.0010735 1831600.0 1748.8 1610.9 1675.5 1739.6 2023.1 1621.1 1756.7 1888.0 1738.0 1788.9 1909.2 False True 1926.336888601483 1746.6561964540415 1789.2095055999878 1847.051141081749 1881.0044353161072 1607.898299073992 1823.552179803125 1850.3423588926519 1664.957904057806 1675.9485487044171 1674.3805034159552 1.1504773763618865 1.0431656322386904 1.0685799923910761 1.1031250885408204 1.123403211801984 0.9602944466885927 1.0890906673141738 1.1050907216834593 0.9943724862186786 1.0009364928015245 1.0 10.709411702641116 -8.772628074171966 24.99864646172437 0.9973425541599834 1.0772446813545868 0.37762782279308127 0.04673112786290044 156.5736534767963 349828.0806020333 0.007739817160019361 0.008276408207994008 1.6879979926370198e-09 8.772628074171966 0.07990212719460343 KLVINS(ph)GNGAVEDR ddPTM_A549_MK2206_60min_R1 2 KLVINSGNGAVEDR 14 1 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 KLVINS(1)GNGAVEDR;KLVINS(1)GNGAVEDR 68.82 0.0013903 7439400.0 1449.2 1695.9 1656.8 1662.8 2069.6 1275.8 1347.8 1425.8 2041.8 1955.5 2338.7 True False 1693.7895304617293 1782.2140662254317 1891.7591531148876 2070.186074645929 1765.1645815825423 1410.8043091925003 1592.6778137942172 1627.9115163293707 1579.335560084602 1513.7511918462676 1757.936245163618 0.9635102155278001 1.0138104104336014 1.0761250064212733 1.1776229543826537 1.004111830812301 0.8025343996825046 0.9059929324376496 0.9260355833768332 0.8984032068453126 0.8610956148215585 1.0 10.779667034065957 -7.003780255673809 24.976326062331175 0.9342724229221798 1.0603047516169146 0.4993004198388389 0.07053612182951602 128.912663281642 851743.6541684666 0.0108267930751623 0.020144041533033594 9.913334129056085e-08 7.003780255673809 0.1260323286947348 KLVINS(ph)GNGAVEDR ddPTM_A549_PD325901_60min_R1 2 KLVINSGNGAVEDR 14 1 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 KLVINS(1)GNGAVEDR;KLVINS(1)GNGAVEDR 107.65 7.0384e-06 21071100.0 3799.0 3931.6 4166.8 4351.8 4227.4 5135.200000000001 4949.8 4622.700000000001 4369.0 4485.299999999999 4845.5 True False 4184.671683324015 4262.9297299514 4449.584105003897 4620.600802345112 3930.482007738282 5093.380633770133 5138.167347634491 4530.496622062005 4185.386123606764 4202.097392533914 4249.534218155254 0.984736554290085 1.0031522305995129 1.0470757209093577 1.0873193543434838 0.9249206632920173 1.1985738606385894 1.2091130660115021 1.0661160469555457 0.9849046763114813 0.9888371705730298 1.0 12.053089004033986 -8.756718652690838 23.77123564823524 0.9928716488930882 1.0677725949696293 0.14559636187120173 0.07949116284172805 91.6631653388842 461567.5664315037 0.01400616844210089 0.015617313934237521 1.750980652281578e-09 8.756718652690838 0.07490094607654108 KLVPIKPAPLPLS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 KLVPIKPAPLPLSPGK 16 2 A0A1B0GVH1;Q9BRW5;Q02086-2;Q02086 A0A1B0GVH1 SP2 Transcription factor Sp2 1 KLVPIKPAPLPLS(1)PGK;KLVPIKPAPLPLS(1)PGK 81.723 4.7686000000000004e-05 7930200.0 3154.1 3091.1000000000004 3289.5 2853.7 3523.9 3406.7 3245.4 2945.3 3409.7999999999997 3858.0 3463.2999999999997 True False 3474.301910074301 3351.597845216393 3512.745251370432 3029.96656777707 3276.393420795033 3378.956964687783 3368.9054729510212 2886.55368095685 3266.4979638989103 3614.4052215896004 3037.336055667545 1.1438648362901416 1.103466255886453 1.156521763476186 0.9975737001914148 1.0787062612585843 1.1124738595792807 1.1091645478822736 0.9503570326275416 1.075448321829176 1.189991872926036 1.0 11.568590824060806 -2.0000000000036073 0.08920118440336336 0.9593801186906034 1.4298465700239869 0.0 0.07345624802266691 114.84341153826848 0.7155729135951105 0.48895831214278906 6.630861525388612 0.009999999999916938 2.0000000000036073 0.4704664513333835 KLVSSAVS(ph)PSIIPQEDPSQQFLQQSLER ddPTM_A549_PD325901_60min_R1 1 KLVSSAVSPSIIPQEDPSQQFLQQSLER 28 1 Q96HW7-3;Q96HW7 Q96HW7-3 INTS4 Integrator complex subunit 4 1 KLVS(0.002)S(0.002)AVS(0.956)PS(0.041)IIPQEDPSQQFLQQSLER 75.654 3.2182e-06 2535900.0 678.85 556.95 620.02 839.92 656.52 988.7 765.24 968.46 864.14 748.85 900.23 True False 747.7663522570434 603.886131116195 662.0982856831417 891.799950803278 610.4083000710448 980.6483550024407 794.3616269553953 949.1433055578281 827.8232009277974 701.5674832004592 789.507417028151 0.947130243654672 0.7648897503576746 0.8386219956937195 1.1295650066976881 0.7731508113865886 1.2421015101970527 1.006148403197422 1.2021968192909136 1.0485312526180868 0.8886141764713069 1.0 9.624809009323782 -6.243859778319786 23.765854359675927 1.0385115651671784 0.84168150985651 0.2847816361625596 0.13110533721132353 354.0012467023374 478571.9403812609 0.015562063072878945 0.041052043323988 5.703483922815821e-07 6.243859778319786 -0.19683005531066833 KLYDIDVAK ddPTM_A549_MK2206_60min_R1 2 KLYDIDVAK 9 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 ; 108.67 0.00043926 4247400.0 3374.8 4000.3999999999996 3449.9 3371.2 5660.5 3883.1 3921.8999999999996 3287.4 5440.6 4713.3 5315.9 False True 3944.38373406172 4204.003272910085 3939.147695757517 4197.144151338918 4827.84794841901 4294.0070646068325 4634.458464104126 3753.399017240269 4208.312786852922 3648.5622564709856 3995.815318623712 0.9871286382225226 1.0521014956111834 0.9858182577652981 1.050384919387253 1.2082259973120772 1.0746260080122592 1.159827993677241 0.9393324560688309 1.0531800023987097 0.9130958178837125 1.0 11.964274189848762 -2.8085045661804626 14.6826461288644 1.0411749186750878 0.4843958022446535 0.0 0.08415829468433784 0.0 0.0 0.009734928538227756 0.0 0.0015541589502288495 2.8085045661804626 -0.5567791164304343 KLYDIDVAK ddPTM_A549_PD325901_60min_R1 2 KLYDIDVAK 9 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 ; 116.23 0.00019645 12082800.0 5596.5 4789.200000000001 4552.3 4907.4 5924.5 5676.0 4840.0 5914.6 6861.5 5838.0 5550.5 False True 6164.652560074453 5192.802691698862 4861.246453203719 5210.51895248596 5508.38355841544 5629.776537871805 5024.188848549623 5796.628663086061 6573.135016508992 5469.387683680689 4867.82368751847 1.2664083491522435 1.0667606357669992 0.9986488347284197 1.0704000980656285 1.1315906064016703 1.1565284404829717 1.0321221907506812 1.190804974705458 1.3503231502330477 1.1235796599833068 1.0 12.249061199273045 -8.290735766317532 24.229741103827422 1.1719557938503278 1.099665602179517 0.08044325608204739 0.10128299524237966 1199.9590388020813 992429.4329275981 0.022917275985997174 0.02770815296136977 5.119932480033976e-09 8.290735766317532 -0.07229019167081074 KMADT(ph)SSMDEDFESDYKK ddPTM_A549_MK2206_60min_R1 1 KMADTSSMDEDFESDYKK 18 2 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 KMADT(0.333)S(0.333)S(0.333)MDEDFESDYKK 49.993 0.0037698000000000002 5028700.0 1359.3 1491.6 1607.4 1388.5 1920.3 1213.4 1522.0 1278.6 2194.8 2442.2 2462.4 True False 1588.7166083057052 1567.5160688612848 1835.3534902926563 1728.682562332134 1637.826413806029 1341.8011826102677 1798.5276989128938 1459.8454655482772 1697.6813043753966 1890.5053238184362 1850.9181212172975 0.8583397558725344 0.8468856892655916 0.9915908592896563 0.9339594996213163 0.884872429002357 0.7249381629738447 0.9716949001126274 0.78871423258214 0.9172103751725542 1.0213878734814608 1.0 10.854025361001593 -9.797280204714856 0.942624563112117 0.9883508450162813 0.8791075018494892 0.3077798860391281 0.07415679267660115 0.4704651418615431 0.8632111808860949 0.02453109919029963 0.014413021295889686 1.5948498257644355e-10 9.797280204714856 -0.10924334316679218 KMADT(ph)SSMDEDFESDYKK ddPTM_A549_PD325901_60min_R1 1 KMADTSSMDEDFESDYKK 18 2 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 KMADT(0.333)S(0.333)S(0.333)MDEDFESDYKK 44.105 0.011112 12173000.0 1547.0 1510.9 2030.5 1838.7 2251.9 1848.8 1718.8 1680.6 1872.5 2258.7 2286.9 True False 1704.0503011587916 1638.2288455040118 2168.3019403884064 1952.2723230093188 2093.734312633259 1833.743985767686 1784.2098745634491 1647.0791145948047 1793.8053367941552 2116.085296527847 2005.625797853524 0.8496352126017291 0.8168167996529011 1.0811099172682077 0.9733980910590073 1.043930684813703 0.9143001589479998 0.8896025751528324 0.8212295216573072 0.8943868485905672 1.0550748294086263 1.0 10.96983674308458 -10.876787035585993 1.216426340886946 0.9985600609867693 0.9213156975893415 0.1819736458368313 0.08244357255567732 0.8730055683821836 2.3596563417768515 0.053784130019532715 0.014015998453114792 1.3280455300241795e-11 10.876787035585993 -0.0772443633974278 KMADTS(ph)SMDEDFESDYKK ddPTM_A549_PD325901_60min_R1 1 KMADTSSMDEDFESDYKK 18 2 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 KMADT(0.079)S(0.461)S(0.461)MDEDFESDYKK 68.88 0.005053800000000001 11371000.0 1633.1 1809.1 2064.9 1864.3 2017.1 1986.3 2015.0 2275.4 2398.6 2061.4 1986.6 True False 1798.8911097753212 1961.5592060370016 2205.0365312524127 1979.4535768675005 1875.4258546172327 1970.1242313556666 2091.681927650308 2230.015361983233 2297.7951833561874 1931.2428521992745 1742.2607940949797 1.0325039258601685 1.1258700262815342 1.2656179480855636 1.1361408025574788 1.0764323349142606 1.1307860671794838 1.2005561594105867 1.2799549697389698 1.3188583426454137 1.108469443119428 1.0 10.766744877707067 -7.720656587974359 22.929692395447173 1.1695667963297045 1.132096022379755 0.06642596716443427 0.09478282339210582 295.51741232826174 166149.25467091432 0.02028220559348476 0.030082937546601685 1.9025821243314658e-08 7.720656587974359 -0.037470773949949576 KMANS(ph)SPVLSK ddPTM_A549_MK2206_60min_R1 3 KMANSSPVLSK 11 1 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 KMANS(0.577)S(0.422)PVLSK;KMANS(0.632)S(0.368)PVLSK;KMANS(0.625)S(0.375)PVLSK 69.714 0.0014311 51610000.0 9031.5 10657.0 10235.8 9047.3 12337.8 9172.0 9663.2 8746.7 12642.0 13581.0 14232.900000000001 True False 10555.79640102478 11199.395780272673 11687.390354571087 11263.888906148733 10522.925963784828 10142.574952119146 11418.878357513187 9986.571510645328 9778.607185125642 10513.042667585867 10698.478121943503 0.9866633628360588 1.0468213939047784 1.0924348511401112 1.0528496462544075 0.9835909223575826 0.9480390422368439 1.0673367022260933 0.9334572073538205 0.9140185242860733 0.9826671184215172 1.0 13.385117964766337 -6.844950910032233 4.245296430580696 0.964653002328722 1.0483813628532004 0.34688131785200915 0.04448296325394015 0.17725579709472564 5.984423723735347 0.0072246337006511615 0.014204160291792296 1.4290554809936122e-07 6.844950910032233 0.0837283605244784 KMANS(ph)SPVLSK ddPTM_A549_PD325901_60min_R1 3 KMANSSPVLSK 11 1 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 KMANS(0.5)S(0.5)PVLSK;KMANS(0.594)S(0.406)PVLSK;KMANS(0.705)S(0.295)PVLSK 105.14 7.566e-05 82956000.0 12477.399999999998 12762.800000000001 13945.599999999999 13607.7 16051.7 15118.4 15658.599999999999 15673.1 14524.6 14349.7 15569.099999999999 True False 13744.096462623591 13838.365947050495 14892.032277705273 14448.216723671028 14924.283967358784 14995.280762889535 16254.496591714695 15360.487725190915 13914.181572657073 13443.657493064879 13654.199400656486 1.0065838398377853 1.0134879051484451 1.0906558371331 1.0581518769219356 1.0930178716037524 1.0982175023874758 1.1904393743461215 1.1249643625720298 1.0190404552015029 0.9845804282321025 1.0 13.737057105255456 -8.877919537177684 6.638014227381867 1.0083603494770923 1.0855652098535171 0.36969782897488057 0.04827889942166237 0.19192457505114677 10.475514271950946 0.009074647822708084 0.009627053692048493 1.3245869219864035e-09 8.877919537177684 0.07720486037642482 KMANSS(ph)PVLSK ddPTM_A549_MK2206_60min_R1 1 KMANSSPVLSK 11 1 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 KMANS(0.255)S(0.744)PVLS(0.001)K 44.925 0.013456000000000001 34779000.0 3718.2 3876.1 3494.9 3500.9 4367.0 3189.7 3479.6 3383.3 4956.8 4568.7 4991.3 True False 4345.7412587377885 4073.376933838314 3990.529372417444 4358.620657161373 3724.6200849299203 3527.231936848499 4111.798279328058 3862.8931359217017 3834.0927143830754 3536.6274969000474 3751.8224571279657 1.158301414418333 1.0857062082187385 1.0636242567491345 1.1617342523446361 0.9927495577125819 0.9401382867004343 1.095946923478798 1.0296044602491028 1.0219280784725853 0.9426425523363782 1.0 11.873375843250601 -2.000000025453947 0.2872312755086726 1.0057007978178738 2.1629905596132497 0.4470022614217075 0.054026309668110194 32.046256699813526 0.3996437449894442 0.017632516301274645 19.095931593984805 0.009999999413901228 2.000000025453947 1.157289761795376 KMANSS(ph)PVLSK ddPTM_A549_PD325901_60min_R1 1 KMANSSPVLSK 11 1 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 KMANS(0.361)S(0.639)PVLS(0.001)K 53.376999999999995 0.0055426 47837000.0 3123.7 3076.7 3624.8 3788.1 3806.9 3647.5 3610.4 4225.7 3412.7 2874.4 3460.0 True False 3440.8157244536 3335.9843066795893 3870.8007256931264 4022.0823336006983 3539.5164770920314 3617.79596932477 3747.7957476866877 4141.415098502481 3269.2760869839303 2692.909893451826 3034.4419347471226 1.1339204369189364 1.099373254923593 1.2756219459561688 1.3254767829116103 1.1664472589049557 1.1922442568096996 1.2350856692201009 1.36480288223001 1.0773895685884587 0.887448154013282 1.0 11.567215499000362 -8.939838624366534 7.983813738566648 1.0338628359793351 1.2227441390627605 0.5834291197554481 0.08713289918599285 0.13784022281110822 15.95388013970958 0.01388004282483539 0.01468812844662546 1.148580332988726e-09 8.939838624366534 0.18888130308342532 KMEES(ph)DEEAVQAK ddPTM_A549_MK2206_60min_R1 2 KMEESDEEAVQAK 13 1 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK 108.75 1.8545999999999998e-05 76936000.0 6578.79 7157.200000000001 6883.3 6542.9800000000005 9043.800000000001 6625.799999999999 7226.799999999999 6830.4 9486.5 10176.3 10644.7 True False 7689.128916026995 7521.470909127109 7859.455443406393 8146.010393725532 7713.469000249415 7326.937758149921 8539.816014785609 7798.630117222708 7337.8228968275935 7877.466762252707 8001.327211225541 0.9609816862931759 0.9400279116912988 0.9822689706252599 1.0180823979173113 0.9640236921479387 0.915715301315327 1.0672999352913088 0.9746670660189403 0.9170757179550065 0.9845200120301213 1.0 12.966023609942098 -5.758665496568164 24.985616075569133 0.9702220566547609 0.9505048009791157 0.027085998394881794 0.041586974791227506 250.01470325245236 2251845.5238539665 0.0062946047390075345 0.022445595769974326 1.743148969227617e-06 5.758665496568164 -0.019717255675645196 KMEES(ph)DEEAVQAK ddPTM_A549_PD325901_60min_R1 4 KMEESDEEAVQAK 13 1 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK 147.35 1.1378e-12 195781600.0 28691.199999999997 29301.6 29601.500000000004 30504.1 36050.399999999994 32848.3 31048.100000000002 32821.8 32355.3 36104.399999999994 36248.8 True False 31603.90950265489 31770.94866597415 31610.43579827996 32388.268977162457 33518.34427112838 32580.794335619175 32229.652435672248 32167.143450796015 30995.519259586603 33824.762022384544 31790.427400075565 0.9941328911664701 0.9993872767466672 0.9943381823864633 1.0188057105858688 1.0543533702553716 1.0248617901734072 1.0138162670815694 1.0118499838325405 0.9749953616387342 1.0639920500818476 1.0 14.956304792182134 -8.66375725981231 7.163588977017919 0.9882217147958915 1.0148427247649958 0.0 0.02832341461755197 0.2148944751303088 13.781749969990061 0.003270417340850238 0.003705843888728995 2.1689160382012057e-09 8.66375725981231 0.026621009969104326 KMEKEELDVS(ph)VREEEVSCSGPLSQK ddPTM_A549_PD325901_60min_R1 1 KMEKEELDVSVREEEVSCSGPLSQK 25 3 F5GY68;F5H0F9;Q9UJX4-2;Q9UJX4-3;Q9UJX4 F5GY68 ANAPC5 Anaphase-promoting complex subunit 5 1 KMEKEELDVS(0.994)VREEEVS(0.005)CS(0.001)GPLSQK 50.757 0.0030432 4537800.0 1745.8 1758.6 1628.6 1611.7 1835.8 1469.2 1400.5 1616.8 1694.5 1382.6 2035.3 True False 1923.032330809968 1906.8033938072363 1739.1265895673773 1711.2510485637256 1706.859741166187 1457.2353223117082 1453.7967938830052 1584.5516556449377 1623.2860577824806 1295.3024000440082 1784.9710028297152 1.0773465382694645 1.0682545491127755 0.9743164380879797 0.9586996348124864 0.9562394786583657 0.8163915940379718 0.814465216285475 0.8877184296736179 0.9094187273681671 0.7256713963367275 1.0 10.801684922270205 -5.867540339839109 1.5908105090579197 0.9301378239659561 1.0890051921713022 0.35748059169503266 0.08346363248684063 0.3732435381466049 1.6475574856469557 0.010239847355688803 0.06422168125579522 1.3566245131419461e-06 5.867540339839109 0.15886736820534608 KMGAPESGLAEYLFDKHTLGDS(ph)DNES ddPTM_A549_PD325901_60min_R1 5 KMGAPESGLAEYLFDKHTLGDSDNES 26 2 G3V1D1;G3V192;P02794 G3V1D1 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed 1 KMGAPESGLAEYLFDKHT(0.001)LGDS(0.994)DNES(0.005);KMGAPESGLAEY(0.001)LFDKHT(0.056)LGDS(0.854)DNES(0.089);KMGAPESGLAEYLFDKHT(0.063)LGDS(0.468)DNES(0.468);KMGAPESGLAEY(0.001)LFDKHT(0.264)LGDS(0.51)DNES(0.225);KMGAPESGLAEYLFDKHT(0.054)LGDS(0.942)DNES(0.004) 101.88 2.3535e-12 44594700.0 11895.2 13516.0 13544.399999999998 14353.6 15503.899999999998 15519.099999999999 14092.5 14687.699999999999 16596.5 15729.0 15969.600000000002 True False 13102.79194721659 14655.040754406127 14463.604433093691 15240.189272609225 14414.959549551388 15392.717594941207 14628.7977992119 14394.742301222248 15899.006820883415 14735.868255672072 14005.440439635155 0.9355501530773652 1.0463819983077873 1.0327132870567883 1.08816208517654 1.0292400022463628 1.0990527332064532 1.0445082296600008 1.0277964740391439 1.1352022015594383 1.0521531485700242 1.0 13.773699733192935 -4.286077808670653 1.2134974720679639 1.062204937256296 4.266840972925022e-06 0.4685917822534168 0.03656291950273481 11.515241221368402 2.270798779754477 0.00712426954312629 26.818634748804246 5.175141052556296e-05 4.286077808670653 -1.062200670415323 KMKS(ph)VGDDEELQQNESGTSPK ddPTM_A549_MK2206_60min_R1 1 KMKSVGDDEELQQNESGTSPK 21 2 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 KMKS(1)VGDDEELQQNESGTSPK 57.278 0.0018951 1314200.0 337.77 253.6 371.97 222.12 415.06 237.17 524.16 369.91 486.63 645.19 514.1 True False 394.7773183163528 266.5071567868206 424.7209392709711 276.53940997134583 354.00522382665724 262.26717197929537 619.393087163063 422.34587530186377 376.4090819884271 499.44113089608425 386.43478156181465 1.0215884727581224 0.68965623567761 1.0990753408749054 0.7156172869680215 0.9160801271456722 0.6786841777526249 1.6028399013663424 1.0929292482289272 0.9740559078743697 1.292433173011868 1.0 8.59408114142371 KMLGEDS(ph)DEEEEMDTSER ddPTM_A549_MK2206_60min_R1 8 KMLGEDSDEEEEMDTSER 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER 247.64 4.396999999999999e-76 395863400.0 36404.7 40211.7 37168.600000000006 33313.8 49937.7 40298.2 36696.3 35920.7 53581.5 54555.5 58614.1 True False 42548.92335053831 42258.30377194244 42439.66638004954 41475.6824955133 42591.93048207119 44562.528776219806 43363.542705398984 41012.56922753011 41445.37580207325 42231.37465955969 44058.601303136275 0.9657347735074263 0.9591385682262754 0.9632549632715759 0.9413753788993044 0.9667109082520811 1.0114376638880649 0.9842242246194999 0.9308640768087811 0.9406875065533002 0.9585273569851952 1.0 15.427136075108923 -7.581265637936291 0.0032912745965627387 1.9277619069849767 5.952432628618736e-06 0.0 0.023673296282767885 32176.62267082471 44.099152210372836 12813.304108996754 13015.398418248838 2.6226139205278313e-08 7.581265637936291 -1.9277559545523482 KMLGEDS(ph)DEEEEMDTSER ddPTM_A549_PD325901_60min_R1 12 KMLGEDSDEEEEMDTSER 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER 208.17 1.0898e-55 830201000.0 73621.59999999999 77984.4 75712.90000000001 76527.8 87957.09999999999 84568.9 84663.1 85742.2 82968.09999999999 86707.59999999999 93980.49999999999 True False 81095.61063464271 84556.41907427553 80851.23269265378 81254.74839875597 81779.29673152222 83880.19891712935 87885.00059992618 84032.0045575453 79481.23928633962 81232.86733838847 82421.49429147455 0.9839133751671257 1.025902524592081 0.9809483968675973 0.9858441550623613 0.9922083727615849 1.017698109433642 1.0662873969395719 1.0195399304503672 0.9643265991424879 0.9855786774638831 1.0 16.33073299928722 -8.749358914547535 24.998526544840495 0.983154226424489 1.0095305251368314 0.1787114762185964 0.024559203605169676 304.4563690626492 630021.7928420077 0.004657184598747715 0.005260617523286847 1.7809063623743307e-09 8.749358914547535 0.026376298712342372 KMPLDLS(ph)PLATPIIR ddPTM_A549_PD325901_60min_R1 1 KMPLDLSPLATPIIR 15 1 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336-3;P15336-7;P15336-5;P15336;C9JCI8;P15336-4 E9PEK8 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 KMPLDLS(1)PLATPIIR 88.969 9.451e-06 21287000.0 5454.5 5399.6 5644.2 5263.4 7797.4 6111.9 6300.5 5795.1 5978.8 6113.4 6293.0 True False 6008.236824609327 5854.643241897846 6027.249353331815 5588.508263951296 7249.737523569677 6062.126712793987 6540.268975265891 5679.512184331995 5727.531827837056 5727.3988806806265 5519.000894613769 1.0886457421076023 1.0608157805539848 1.092090664311011 1.0125941942508765 1.31359600442265 1.098410170346281 1.1850458262561294 1.0290833962130495 1.0377841818121105 1.0377600928222792 1.0 12.430191404048326 -8.38744603987848 7.160002233411649 1.0186715672890183 1.1203067378834792 0.2771973669947947 0.07389898715719984 0.2420434605619421 13.158127416782227 0.011880139675983899 0.014364347388768177 4.09783021277821e-09 8.38744603987848 0.10163517059446092 KMS(ph)DDEDDDEEEYGKEEHEK ddPTM_A549_MK2206_60min_R1 6 KMSDDEDDDEEEYGKEEHEK 20 2 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK 273.38 1.5713999999999997e-112 321884000.0 29286.499999999996 31438.300000000003 26080.699999999993 23801.4 45211.5 36467.0 30515.3 36333.9 43028.99999999999 37240.700000000004 36872.299999999996 True False 34229.345213819666 33038.37518616368 29779.33543254674 29632.744068485437 38560.948241311904 40325.9137351645 36059.53501355889 41484.34159290202 33283.00020319346 28828.000005210568 27715.89028629004 1.235007963310909 1.192037305852176 1.0744498958879702 1.0691608229934288 1.3912938694372914 1.4549745044672853 1.3010419164271307 1.496771027897404 1.200863470716553 1.0401253471359946 1.0 14.758425729984603 -9.920714844695588 1.0565901576783006 1.0292363722536901 1.2681280729785407 0.3379233167257747 0.13295070152192323 0.40063132502726434 0.907841006016158 0.04868968360067812 0.028007183721661038 1.2002871462367626e-10 9.920714844695588 0.23889170072485055 KMS(ph)DDEDDDEEEYGKEEHEK ddPTM_A549_PD325901_60min_R1 8 KMSDDEDDDEEEYGKEEHEK 20 2 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK 315.17 3.5504999999999987e-165 683661000.0 73488.0 77965.30000000002 75164.79999999999 73871.5 67654.4 71750.3 74869.4 78232.0 77107.70000000001 81980.2 88222.6 True False 80948.44766099364 84535.70945024409 80265.93533066087 78434.37478065096 62902.58833900945 71165.98934553613 77718.59598710759 76671.60138818307 73867.13151824976 76803.95618117147 77371.77948913914 1.046227037758083 1.0925909938792422 1.0374058327290765 1.013733628701935 0.8129913613766534 0.9197925886598727 1.0044824676420572 0.9909504717924401 0.9547037951817907 0.9926611057453141 1.0 16.23951983461311 -6.337721000009975 3.509864029970202 0.9657959597253116 1.0638640296135777 0.4063884016825414 0.05411577592420959 0.20302984975561308 4.831754828010211 0.00804327629661137 0.020452529084447866 4.594931061605249e-07 6.337721000009975 0.09806806988826611 KMS(ph)GGSTMSSGGGNTNNSNSK ddPTM_A549_MK2206_60min_R1 6 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.686)GGS(0.223)T(0.079)MS(0.011)S(0.001)GGGNTNNSNSK;KMS(0.243)GGS(0.243)T(0.243)MS(0.243)S(0.028)GGGNTNNSNSK;KMS(0.812)GGS(0.157)T(0.031)MSSGGGNTNNSNSK;KMS(0.7)GGS(0.133)T(0.133)MS(0.025)S(0.007)GGGNT(0.001)NNSNSK;KMS(0.445)GGS(0.219)T(0.219)MS(0.058)S(0.058)GGGNT(0.002)NNSNSK;KMS(0.309)GGS(0.309)T(0.309)MS(0.036)S(0.036)GGGNT(0.001)NNSNSK 122.04 2.6989e-15 67228600.0 3705.03 4185.8099999999995 3215.3199999999997 2990.09 4577.919999999999 4384.999999999999 3913.49 3671.84 5925.05 6258.709999999999 5331.27 True False 4330.348484713377 4398.849849959947 3671.3007244044934 3722.6621842302425 3904.5140323339524 4849.017789472577 4624.520475964926 4192.334564538391 4583.035635360601 4844.863064137122 4007.368523433294 1.080596520981647 1.0976903731806662 0.9161375358758181 0.9289542906927036 0.9743336579858093 1.2100254221985562 1.154004292074164 1.0461564839927993 1.1436521519199105 1.2089886507334016 1.0 11.96843947286416 KMS(ph)GGSTMSSGGGNTNNSNSK ddPTM_A549_PD325901_60min_R1 8 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.547)GGS(0.186)T(0.202)MS(0.027)S(0.038)GGGNTNNSNSK;KMS(0.447)GGS(0.172)T(0.172)MS(0.172)S(0.036)GGGNT(0.002)NNSNSK;KMS(0.704)GGS(0.147)T(0.147)MS(0.002)SGGGNTNNSNSK;KMS(0.997)GGS(0.002)T(0.001)MSSGGGNTNNSNSK;KMS(0.313)GGS(0.313)T(0.313)MS(0.051)S(0.009)GGGNTNNSNSK;KMS(0.797)GGS(0.134)T(0.055)MS(0.007)S(0.007)GGGNTNNSNSK;KMS(0.309)GGS(0.309)T(0.309)MS(0.034)S(0.04)GGGNTNNSNSK;KMS(0.2)GGS(0.2)T(0.2)MS(0.2)S(0.2)GGGNTNNSNSK 156.7 8.209e-28 194576200.0 8970.6 8923.42 9153.1 9752.820000000002 9794.640000000001 9659.87 9608.02 10383.44 10217.91 10906.869999999999 10094.32 True False 9881.288708193317 9675.427920145208 9774.284408061627 10355.229541138717 9106.698276073634 9581.203221439688 9973.658458810283 10176.334143548895 9788.48677643918 10218.208366821926 8852.782633166635 1.116178846544071 1.0929250520504776 1.104091765615324 1.169714650209892 1.0286820148453337 1.0822815399921886 1.126612825829963 1.1495068347689483 1.1056960485810374 1.154236898186088 1.0 13.111915283369651 -10.502595139634588 0.8001365987876672 0.9990857918431684 1.1079869467734225 0.0 0.05682952314576935 0.3776663615986584 0.43086480454573417 0.024383423664633228 0.006802592618726582 3.1434377210266114e-11 10.502595139634588 0.1089011549302541 KMS(ph)PTGNEMK ddPTM_A549_MK2206_60min_R1 1 KMSPTGNEMK 10 1 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 KMS(0.928)PT(0.072)GNEMK 49.928999999999995 0.01179 3387200.0 2510.8 2477.6 2323.8 2347.0 3712.4 2470.6 2022.4 2148.2 3446.4 3206.6 3745.2 True False 2934.561656833642 2603.699257314776 2653.349782718723 2922.015105360835 3166.3108777865414 2732.0372521484483 2389.8439016303782 2452.7139285865846 2665.795902769897 2482.2268329195813 2815.163477738394 1.0424125206366943 0.9248838576886125 0.9425206755134283 1.0379557451875876 1.124734283754721 0.9704719721439672 0.8489183383233919 0.8712509763578672 0.946941775797513 0.8817345253831289 1.0 11.459002987313749 -7.5069863060937685 24.978691034151105 0.9542630693011636 1.0109043873661272 0.25148611048347924 0.06885559664160318 1221.0343089403598 1919141.9217583868 0.011088143924471518 0.0174214890179509 3.1118144553767364e-08 7.5069863060937685 0.05664131806496364 KMSGGS(ph)TMSSGGGNTNNSNSK ddPTM_A549_MK2206_60min_R1 1 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.068)GGS(0.751)T(0.182)MSSGGGNTNNSNSK 163.72 2.8489e-28 6588100.0 1977.0 2134.5 2101.8 1876.4 3227.2 2157.7 2388.3 2813.1 3735.4 3411.0 3238.4 True False 2310.6692669906424 2243.1369328133633 2399.866844529741 2336.118084234798 2752.483155045989 2386.026381834657 2822.2231953440637 3211.8655397574353 2889.3378642080643 2640.452730957616 2434.2159047068308 0.949245817728289 0.9215028660670589 0.9858890659161859 0.9597004438750278 1.130747338279958 0.9802032667772017 1.1593972374788026 1.319466171240986 1.1869686080931456 1.0847241306130664 1.0 11.249241419367694 -6.706519602275168 1.3157532538003787 1.1109964391995208 0.9389495469975181 0.44142634430908456 0.08896877543622178 0.42288222911438794 1.446328222786544 0.01671107452451608 0.04816822619684828 1.9655332624524642e-07 6.706519602275168 -0.17204689220200275 KMSGGST(ph)MSSGGGNTNNSNSK ddPTM_A549_PD325901_60min_R1 1 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.19)GGS(0.124)T(0.305)MS(0.305)S(0.06)GGGNT(0.016)NNSNSK 41.912 0.02283 12049000.0 299.43 283.55 529.05 460.52 537.55 433.72 413.39 734.0 526.85 317.46 205.92 True False 329.82791317128454 307.44575361881147 564.9545144360926 488.96527448319557 499.79434244682614 430.1879281194075 429.121782665688 719.3597941881395 504.7083266702271 297.4155214219375 180.59314543442986 1.826358981554143 1.7024220541661672 3.128327562361538 2.7075516809176468 2.767515573442916 2.382083368029054 2.3761797915054004 3.983317265213292 2.79472582116068 1.6468815619024908 1.0 7.496599324922252 -10.626211558275207 0.9723693951306029 1.0282357898166996 2.6399985854742827 0.3903392790875313 0.6123662841395061 0.3538550364632957 0.611855389343239 0.3779562440010061 0.10985182709065794 2.3647674654880525e-11 10.626211558275207 1.611762795657583 KMSQPGS(ph)PSPK ddPTM_A549_MK2206_60min_R1 1 KMSQPGSPSPK 11 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 KMS(0.001)QPGS(0.937)PS(0.062)PK 57.159 0.005765999999999999 2883800.0 1172.4 1624.8 2096.2 1517.7 2190.3 1730.2 1529.8 1357.0 2567.4 2103.6 2574.3 True False 1370.2724575719928 1707.4953799180855 2393.4726803231697 1889.5365681321416 1868.1097714728655 1913.2886155861909 1807.7448579480579 1549.3589056382077 1985.8879992953325 1628.395298986349 1935.0302629344083 0.7081400657238408 0.8824127522061211 1.2369174406055794 0.9764894143137188 0.9654163075671695 0.9887641822638749 0.9342204577238361 0.8006897542205139 1.0262826568323538 0.8415347967307458 1.0 10.918140414258636 -5.5209581161476144 24.98786341095784 0.999443400933484 0.7517081463376826 0.31743864025170576 0.10850374882774663 40.42531066638572 525925.8247941134 0.013013359963641316 0.05205039512649002 3.0132966159165376e-06 5.5209581161476144 -0.24773525459580148 KMSQPGS(ph)PSPK ddPTM_A549_PD325901_60min_R1 3 KMSQPGSPSPK 11 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 KMS(0.001)QPGS(0.941)PS(0.058)PK;KMS(0.017)QPGS(0.948)PS(0.035)PK;KMS(0.003)QPGS(0.993)PS(0.003)PK 57.803999999999995 0.0033265 16016600.0 3592.08 3736.8099999999995 3464.5200000000004 3643.9000000000005 4271.62 4237.8 3905.02 4383.4 4382.5 4663.6 4379.5 True False 3956.7453172504693 4051.724093035835 3699.6431610511936 3868.9754271026595 3971.5961474889996 4203.288761838114 4053.627673008939 4295.969648289225 4198.318765554277 4369.139500105043 3840.8492639378683 1.0301745903961297 1.054903177554478 0.9632357082553399 1.007322902106279 1.0340411389685942 1.094364416042886 1.0553987918945087 1.1184947268367258 1.0930704323579492 1.1375451625054247 1.0 11.907209630349199 -7.002809400970966 10.41002203128355 1.0556474347453857 1.0141251105112312 0.2582506663050146 0.04391073747078323 0.17412973289744674 411.20993856438776 0.006782248363489571 0.012436986911628213 9.935519933954662e-08 7.002809400970966 -0.04152232423415447 KMSQPGSPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KMSQPGSPSPK 11 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 KMS(0.001)QPGS(0.417)PS(0.581)PK 57.328 0.0056324 4943700.0 1905.5 2157.6 2107.4 1783.6 2517.2 2097.3 2267.2 2282.0 2448.5 2424.4 2627.0 True False 2098.94495724504 2339.428524097857 2250.4208368256727 1893.768921150499 2340.400555868572 2080.2202841576 2353.4795366594435 2236.4837198056307 2345.5980598881115 2271.3229702493077 2303.8956539250557 0.9110416757239637 1.0154229511706685 0.9767893927798856 0.8219855434529597 1.0158448590678681 0.9029142793917819 1.0215217571377044 0.9707400228805597 1.0181008223579957 0.9858619101866635 1.0 11.169859661609907 -7.77649998805172 24.997619087285813 1.006212279808144 0.9437290349515645 0.2257207429859297 0.053151770873661366 240.83730908702395 399741.3080645083 0.007696864934471972 0.010656988634034895 1.6730156824265375e-08 7.77649998805172 -0.062483244856579634 KMVT(ph)PK ddPTM_A549_MK2206_60min_R1 4 KMVTPK 6 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 KMVT(1)PK;KMVT(1)PK;KMVT(1)PK;KMVT(1)PK 60.973 0.033458999999999996 275905000.0 18576.8 20250.7 17791.5 16679.199999999997 26185.299999999996 19747.9 18049.8 17608.7 26762.2 25703.700000000004 24726.1 True False 21712.109680845617 21281.374132266843 20314.602228780495 20765.604748757745 22333.477057457145 21837.609670404905 21329.215019604424 20104.787149382104 20700.604430451647 19897.216318005052 18585.926964356335 1.1682016034220195 1.1450262434087777 1.0930099030163722 1.1172757101962978 1.2016337468821316 1.1749540236698752 1.147600281681355 1.0817209810378898 1.11377842332808 1.0705528089163094 1.0 14.181923023279394 -10.273650291253253 0.4402369077321572 0.9792584425190091 1.1490299506100803 0.5316248182491291 0.03718669318804543 0.6053111144235157 0.19286129493414833 0.04450300225779784 0.010195505533294433 5.325369035634877e-11 10.273650291253253 0.16977150809107122 KMVT(ph)PK ddPTM_A549_PD325901_60min_R1 2 KMVTPK 6 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 KMVT(1)PK;KMVT(1)PK 63.486000000000004 0.036963 194911000.0 12445.0 10959.3 12173.699999999999 11867.599999999999 13764.5 10845.599999999999 13047.900000000001 12584.4 12564.1 12507.1 12414.300000000001 True False 13708.407238475225 11882.87867266669 12999.880488405004 12600.634698724867 12797.72900494715 10757.277029447214 13544.444974584843 12333.394269729184 12036.074569834678 11717.399571524955 10887.41980073156 1.2591052324035592 1.0914320279877736 1.194027669212452 1.1573572921178432 1.1754602320089862 0.9880465001197435 1.2440454416642177 1.1328114921131693 1.105502937346637 1.0762329170716487 1.0 13.410374471185253 -14.999999999997213 0.12059590680904977 0.48078079377886446 1.2219051197946695 0.2738177411442788 0.07204460448849552 53.02327746712308 0.44491385721966814 6.605949368016379 0.23997173853001694 1.0000000000064175e-15 14.999999999997213 0.7411243260158051 KNDMDEPPPLDYGS(ph)GEDDGK ddPTM_A549_MK2206_60min_R1 4 KNDMDEPPPLDYGSGEDDGK 20 1 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5;H7C2H0 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDY(0.003)GS(0.997)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK 113.6 4.5871e-12 50299000.0 12109.599999999999 12244.400000000001 11832.1 10739.2 16446.4 12183.0 12368.800000000001 12873.5 18712.4 16505.9 16722.9 True False 14153.404428705058 12867.58765993907 13510.069697954292 13370.304482101003 14027.15634641435 13472.196973579103 14616.05085565952 14698.358048440274 14474.071277562502 12777.205726154583 12570.142401439558 1.1259541838670166 1.0236628392105922 1.0747745941531333 1.0636557689728168 1.115910695236669 1.0717616828299605 1.1627593696938279 1.1693072026580213 1.151464384039508 1.0164726315822254 1.0 13.61771337303794 -4.939850636670432 19.651114251130405 1.084540019329462 1.7560895478460474 0.04180095749412127 0.05636548686830448 872.5062367049229 260327.4920821685 0.009064175875514946 47595.10224574821 1.1485485644404742e-05 4.939850636670432 0.6715495285165853 KNDMDEPPPLDYGS(ph)GEDDGK ddPTM_A549_PD325901_60min_R1 5 KNDMDEPPPLDYGSGEDDGK 20 1 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5;H7C2H0 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDY(0.122)GS(0.878)GEDDGK;KNDMDEPPPLDY(0.002)GS(0.998)GEDDGK;KNDMDEPPPLDY(0.01)GS(0.99)GEDDGK;KNDMDEPPPLDY(0.002)GS(0.998)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK 117.82 1.3047999999999999e-14 80081600.0 17244.399999999998 17379.100000000002 18233.3 20078.1 22219.8 20304.0 19421.399999999998 20319.4 22946.5 21034.0 23442.8 True False 18995.038793343672 18843.69774895675 19470.721383739936 21318.278636326435 20659.15790214862 20138.650955769743 20160.49200479787 19914.11362673908 21982.138403603247 19705.909650315105 20559.484216153138 0.9239063876135416 0.9165452572079444 0.9470432808057614 1.0369072692775594 1.0048480635480714 0.9795309427046446 0.9805932771872853 0.9686095924085972 1.069196978508457 0.9584826858074874 1.0 14.327516451078713 -5.079704473976873 0.43330779260773605 1.0265366246163425 0.800275339657398 0.24252216454718967 0.03808318541070515 3.5312095801809606 0.39208769057914544 0.008667181459877894 0.4239589657554297 8.323299571850953e-06 5.079704473976873 -0.2262612849589445 KNDMDEPPPLDYGS(ph)GEDDGKSDK ddPTM_A549_MK2206_60min_R1 2 KNDMDEPPPLDYGSGEDDGKSDK 23 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5;H7C2H0 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDYGS(0.979)GEDDGKS(0.021)DK;KNDMDEPPPLDYGS(0.999)GEDDGKSDK 92.822 1.5710999999999998e-07 28956800.0 4468.5 5594.0 5156.3 4630.5 6841.5 5271.5 4993.9 4644.4 7162.200000000001 7109.6 8066.5 True False 5222.673555663979 5878.710706094147 5887.540874702015 5764.972707871046 5835.124412880251 5829.326631061504 5901.226987911367 5302.757922878473 5539.9731356831935 5503.536422168358 6063.365425925656 0.8613489685666876 0.9695458368644639 0.9710021516315257 0.9507876076908136 0.96235737135857 0.9614011727112054 0.9732593326272205 0.8745568756593513 0.9136795733925999 0.9076702516784508 1.0 12.565903057832195 -8.369443243225561 0.0056412728425732405 1.8965694544838467 3.541033192434775e-07 0.0 0.043630417774857426 5693.870776324925 24.313067190302135 4073.173173163013 4099.209336288813 4.271267358344576e-09 8.369443243225561 -1.8965691003805274 KNDMDEPPPLDYGS(ph)GEDDGKSDK ddPTM_A549_PD325901_60min_R1 3 KNDMDEPPPLDYGSGEDDGKSDK 23 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5;H7C2H0 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDY(0.001)GS(0.931)GEDDGKS(0.069)DK;KNDMDEPPPLDYGS(0.998)GEDDGKS(0.002)DK;KNDMDEPPPLDYGS(0.993)GEDDGKS(0.007)DK 110.03 2.8717e-11 64314000.0 13870.3 12593.6 15347.1 14882.1 16535.6 16764.7 14136.400000000001 15955.2 16262.0 17158.300000000003 17376.4 True False 15278.402645224809 13654.906869243041 16388.646495609424 15801.33351729864 15374.196500723163 16628.173841518576 14674.368437734898 15636.961019387749 15578.564692628323 16074.922009746197 15239.212958075119 1.0025716345888405 0.8960375386057868 1.0754260433722223 1.0368864560637077 1.0088576452746871 1.0911438725388676 0.9629347970991563 1.0261003020567323 1.0222683241901533 1.0548393840266037 1.0 13.895500775110184 -5.7597833054407825 24.999998554480573 1.0188466697785383 0.9493046039874545 0.3311323953252654 0.04196235522809413 35.045569520181054 528994.5413930621 0.0050901830242121825 0.01787390442044383 1.738668134143882e-06 5.7597833054407825 -0.0695420657910838 KNDMDEPPPLDYGS(ph)GEDDGKSDKR ddPTM_A549_PD325901_60min_R1 2 KNDMDEPPPLDYGSGEDDGKSDKR 24 3 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5;H7C2H0 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDYGS(0.983)GEDDGKS(0.017)DKR;KNDMDEPPPLDYGS(0.992)GEDDGKS(0.008)DKR 103.21 4.0448e-11 23962000.0 5037.2 4159.200000000001 5075.6 4929.9 6231.6 5383.700000000001 4805.0 5905.6 6030.6 5970.0 6359.7 True False 5548.572835809354 4509.710380713673 5420.060738062253 5234.408726384755 5793.913913852927 5339.856932160046 4987.856904396892 5787.808175146422 5777.1548539764135 5593.0531811534265 5577.497217459908 0.9948140930380013 0.8085544832898143 0.97177291655031 0.9384870170797859 1.0388017578414104 0.9573930248578255 0.894282275710117 1.0377070484281288 1.0357969943743752 1.002789058082328 1.0 12.445402173390079 -6.803044399688954 0.5028334652116856 1.01650228005616 0.8989549348780091 0.19871161390482428 0.05985460157436635 1.310281203854758 0.5113841941026662 0.013385507386281883 0.07003740597313995 1.5738219580297942e-07 6.803044399688954 -0.11754734517815091 KNEKAEENTDQAS(ph)PQEDYAGFER ddPTM_A549_PD325901_60min_R1 1 KNEKAEENTDQASPQEDYAGFER 23 2 Q9NU22 Q9NU22 MDN1 Midasin 1 KNEKAEENT(0.001)DQAS(0.999)PQEDYAGFER 128.91 1.3183e-22 15702000.0 5677.8 5796.3 5581.3 6463.2 7498.1 7092.6 5859.9 7118.2 6270.9 6496.1 7980.3 True False 6254.20607622456 6284.774543116623 5960.080581083385 6862.417185007794 6971.459323040737 7034.840217144036 6082.901701160319 6976.22191688013 6007.355880642172 6085.93513736864 6998.773691289726 0.8936145605062481 0.8979822495101241 0.8515892703461695 0.9805170859501238 0.9960972636844962 1.0051532636209106 0.869138218989814 0.9967777534459126 0.8583440679212966 0.8695716429497995 1.0 12.772886443222195 KNES(ph)PFWK ddPTM_A549_MK2206_60min_R1 1 KNESPFWK 8 1 P46013 P46013 MKI67 Antigen KI-67 1 KNES(1)PFWK 61.353 0.004547600000000001 8457900.0 2366.9 2308.8 2171.2 1755.7 3557.3 2893.0 2860.0 2580.9 3898.8 3674.7 3726.4 True False 2766.374854850861 2426.3080583178707 2479.108808089718 2185.846578816368 3034.025882326817 3199.1353397820226 3379.6249795603667 2946.7504786747604 3015.7280251042453 2844.5827178100108 2801.0320365920006 0.9876269955900587 0.8662193172449201 0.8850697798894279 0.7803718594650116 1.083181428377484 1.1421273651958626 1.2065642004124797 1.0520231258261703 1.0766488871628417 1.015548083938018 1.0 11.45174276888425 -6.777227338878443 24.995092121731044 1.062155457135419 0.8792252072895665 0.6454348838593792 0.0712014015294113 133.07791224353585 210685.4287934404 0.011338176743584498 0.02147786365656549 1.6702160822463624e-07 6.777227338878443 -0.1829302498458525 KNES(ph)PFWK ddPTM_A549_PD325901_60min_R1 1 KNESPFWK 8 1 P46013 P46013 MKI67 Antigen KI-67 1 KNES(1)PFWK 73.9 0.0021436999999999997 13122000.0 6514.2 5673.6 5271.9 4893.2 5437.8 5543.0 5277.8 4871.0 7587.2 6787.4 8238.7 True False 7175.516788499416 6151.73418350093 5629.682836510044 5195.441850736503 5055.867687391592 5497.859645775795 5478.649567122976 4773.844083774425 7268.336369198722 6358.84240565507 7225.3921294222855 0.993097213268222 0.8514048889403043 0.7791525685624168 0.7190532718051816 0.6997360969245886 0.76090813443718 0.7582494443192286 0.6607038065567415 1.0059435168371782 0.880068831110416 1.0 12.818860170935812 -8.779832974858829 24.99126947638076 1.0028067001830132 0.7745140290700657 0.43147546858881913 0.09088689936570267 115.69118943882381 157188.3162198703 0.014722338028014014 0.01568706682541057 1.6602252900526036e-09 8.779832974858829 -0.2282926711129475 KNGNGGPGPYVGQAGT(ph)ATLPR ddPTM_A549_MK2206_60min_R1 1 KNGNGGPGPYVGQAGTATLPR 21 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 KNGNGGPGPYVGQAGT(0.558)AT(0.442)LPR 53.481 0.0055453 23416000.0 1659.4 1661.4 1656.8 1560.5 2194.6 1585.7 1315.2 1798.6 2614.6 2439.7 2108.6 True False 1939.4661515651364 1745.9581635868458 1891.7591531148876 1942.822570053508 1871.777247169041 1753.4977214975293 1554.154815775451 2053.557057981489 2022.3972746582444 1888.570075554761 1584.9764256005492 1.2236561504883396 1.1015672759456345 1.1935566501552841 1.2257737961732589 1.1809495819219031 1.1063241655680318 0.980553900154433 1.29563886554552 1.2759794038526195 1.1915445839134042 1.0 10.630245667031748 -11.013562841145568 1.3233578701860844 1.0008370964160227 1.1830140624743022 0.0 0.10080054333709844 0.3916782349965459 1.230710919888985 0.06291481928588395 0.014542604446902556 9.69253011067682e-12 11.013562841145568 0.1821769660582795 KNGNGGPGPYVGQAGTAT(ph)LPR ddPTM_A549_MK2206_60min_R1 1 KNGNGGPGPYVGQAGTATLPR 21 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 KNGNGGPGPYVGQAGT(0.016)AT(0.984)LPR 156.2 1.2691000000000001e-27 21587000.0 2935.5 2352.7 2521.6 2361.5 3878.4 3389.7 2426.4 3239.7 3805.1 3900.2 3881.0 True False 3430.940633915545 2472.4423808058104 2879.2007970150307 2940.067606011765 3307.892497685412 3748.3958040992434 2867.245472169676 3698.937396165143 2943.2509254960923 3019.1421111934587 2917.2405898490642 1.1760910793076065 0.8475277594206697 0.9869603511735034 1.0078248658139923 1.133911446726634 1.28491143896129 0.9828621890654637 1.2679576065944302 1.0089160749159787 1.0349307910012546 1.0 11.510388657346194 -4.942163781295733 20.673030270049903 1.0361273048647552 3.37242050819136 0.05282602183515617 0.12390356073988953 606.7766579563144 267418.185090289 0.016481135316914378 14779.78085266924 1.1424474133489493e-05 4.942163781295733 2.336293203326605 KNGNGGPGPYVGQAGTAT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 KNGNGGPGPYVGQAGTATLPR 21 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 KNGNGGPGPYVGQAGT(0.011)AT(0.989)LPR;KNGNGGPGPYVGQAGT(0.023)AT(0.977)LPR 140.57 1.1222000000000001e-21 73109000.0 4657.4 4343.3 4991.799999999999 5980.200000000001 5614.8 5365.1 5125.7 5544.299999999999 6236.1 6971.799999999999 6626.9 True False 5130.215819403336 4709.325133812677 5330.573566131916 6349.583371980383 5220.435818008445 5321.408404393239 5320.761318390666 5433.714587080791 5974.01840362191 6531.599358185164 5811.833311380263 0.8827190224739863 0.8102994152621785 0.9171931265981109 1.0925267521948954 0.8982425231959438 0.9156161437000071 0.9155048043053783 0.9349398539082202 1.027906012363443 1.1238449226331928 1.0 12.504777610431596 -2.0000000000128204 0.20394270285181657 1.020420700998248 0.18244230970854114 0.3631032998969391 0.0718139994819394 39.13440078638565 0.439097922989127 0.050617743369027315 10.680170115632679 0.009999999999704799 2.0000000000128204 -0.8379783912897069 KNGSTAVAESVAS(ph)PQK ddPTM_A549_MK2206_60min_R1 3 KNGSTAVAESVASPQK 16 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KNGSTAVAES(0.062)VAS(0.938)PQK;KNGSTAVAES(0.001)VAS(0.999)PQK;KNGSTAVAES(0.001)VAS(0.999)PQK 166.93 6.1959e-22 219541500.0 13359.060000000001 14867.0 14723.619999999999 12151.33 18900.36 14763.86 14925.96 14496.17 23239.239999999998 23544.61 21774.1 True False 15613.742730340928 15623.666797908778 16811.650713414678 15128.40639549393 16120.142081155504 16326.161865742888 17637.813727244346 16551.046490158747 17975.589245440544 18225.866248558184 16366.990035411616 0.9539776523697416 0.9545839988968904 1.0271681400820183 0.9243242870413017 0.9849179382573074 0.9975054564351544 1.0776455346452325 1.0112455897112973 1.0982831422606456 1.1135747140509467 1.0 13.998501407515475 -7.5289504740296795 3.4091975771481544 1.0465116439554538 0.9696386291182151 0.5281991810393866 0.040226997776509496 0.17970572886734357 4.413448333860676 0.006510674133484173 0.010229664143292464 2.9583498109048022e-08 7.5289504740296795 -0.07687301483723874 KNGSTAVAESVAS(ph)PQK ddPTM_A549_PD325901_60min_R1 4 KNGSTAVAESVASPQK 16 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KNGSTAVAES(0.028)VAS(0.972)PQK;KNGSTAVAES(0.003)VAS(0.997)PQK;KNGSTAVAES(0.016)VAS(0.984)PQK;KNGSTAVAESVAS(1)PQK 205.33 3.1163e-40 376538800.0 14998.22 17108.74 18268.629999999997 16171.529999999999 18999.81 19025.43 18367.17 19219.02 20931.41 19105.93 22320.010000000002 True False 16520.82825329399 18550.553562928264 19508.449089996477 17170.40867989063 17665.32889138616 18870.49320594121 19066.14270525108 18835.68156907047 20051.735628639 17899.57831916158 19574.79026820091 0.8439849432324157 0.9476757251935153 0.9966108868960806 0.8771694840472349 0.9024530352227245 0.9640201988062255 0.9740151717601734 0.962241807498131 1.024365285855087 0.9144199285873985 1.0 14.256709229561427 -7.951434686924283 1.0858021075594007 1.0106887689922233 0.9188383339418361 0.15758802336112 0.04875038045199292 0.2848472610388033 0.6726100617043815 0.0072076546102256035 0.010980470514414932 1.1183179945677477e-08 7.951434686924283 -0.09185043505038715 KNHEEEVK ddPTM_A549_MK2206_60min_R1 4 KNHEEEVK 8 1 P05783;F8VZY9;CON__Q148H6 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 133.23 0.00033866 47784600.0 7346.0 7312.2 6206.909999999999 3039.91 6090.69 5979.880000000001 6089.47 6555.27 7196.13 9002.9 9072.48 False True 8585.825207543381 7684.3597470685745 7087.143170606192 3784.6880864667464 5194.757569288251 6612.666932476918 7195.847875623589 7484.499597172418 5566.218044858266 6969.138637214401 6819.532828290086 1.2590048942833774 1.1268161530348308 1.0392417411946393 0.5549776182272166 0.7617468381028049 0.9696656793035723 1.0551819394097497 1.0975091381808135 0.8162169147082068 1.0219378383668294 1.0 12.735457195554599 -5.801623387098201 3.093234859434677 0.9065663141258994 1.2125241621482732 0.3445888242596712 0.15031021760197605 0.2096011791256675 4.000882380594935 0.021786761485014773 0.0904651675277751 1.5789799411316857e-06 5.801623387098201 0.3059578480223738 KNHEEEVK ddPTM_A549_PD325901_60min_R1 2 KNHEEEVK 8 1 P05783;F8VZY9;CON__Q148H6 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 160.88 7.3342e-05 75865000.0 5317.3 6225.8 4963.0 4684.7 5237.9 4280.4 4213.9 4352.1 4775.6 6059.700000000001 6703.4 False True 5857.1083816106275 6750.470015447004 5299.819024943444 4974.063279274356 4870.007973774032 4245.541841562095 4374.262270434555 4265.2939513436 4574.898139596349 5677.089507845131 5878.9242963537135 0.9962891315411874 1.1482491821903285 0.9014946881065558 0.8460839140860209 0.8283841955227349 0.7221630399621422 0.7440582749377475 0.7255228569602545 0.7781862648637675 0.9656680749174188 1.0 12.521336484912695 -5.896873527502007 5.312822659266805 0.8511977556400796 1.0701394831501758 0.48716857840167826 0.09388538704531821 0.16636622393509012 7.196006555803847 0.01615450267304654 0.05237855656879693 1.2680210771905908e-06 5.896873527502007 0.21894172751009622 KNHLEGK ddPTM_A549_MK2206_60min_R1 2 KNHLEGK 7 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 ; 59.205 0.0097067 3817000.0 1663.0500000000002 1432.81 1316.69 1336.59 2152.7400000000002 2163.0 2046.9299999999998 2212.84 2827.6000000000004 2016.1599999999999 2006.5 False True 1943.732182331203 1505.7339089736774 1503.416440919148 1664.054610001805 1836.0747977174346 2391.8872243168025 2418.830685108915 2526.5168465382844 2187.1531147493506 1560.7080557160668 1508.230673417197 1.2887499349998568 0.9983445738854636 0.9968080263961603 1.103315719094585 1.2173700151300075 1.5858895237142376 1.6037538075184297 1.675152807238668 1.4501449634318333 1.0347940028165399 1.0 10.55864138034074 -6.882803826936881 4.101681063058263 1.314755399972972 1.0828077270753635 0.24270654120895807 0.22191369949157536 0.362438807696729 11.136050785483196 0.039929054352767245 0.07804540660932081 1.3097734208247803e-07 6.882803826936881 -0.23194767289760843 KNHLEGK ddPTM_A549_PD325901_60min_R1 2 KNHLEGK 7 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 ; 68.422 0.007161399999999999 4255400.0 2077.1000000000004 1903.54 1421.9299999999998 1478.5900000000001 2280.6 1638.48 1555.3400000000001 1473.63 1901.24 2328.7 1880.13 False True 2287.9656629197975 2063.9579962742114 1518.430720559709 1569.9191461784685 2120.418523642883 1625.136762116313 1614.529314814705 1444.23729360963 1821.3374945401968 2181.665484581573 1648.885929126043 1.3875827445094915 1.2517287944643742 0.9208828177486608 0.9521090079351765 1.2859704156531713 0.9855968405150272 0.9791637409814347 0.8758867233315025 1.104586716623604 1.3231148656462357 1.0 10.687275880419552 -5.584063918643496 4.877218123448392 1.033006133415175 1.3593074514640828 0.382809578791664 0.1364597948835638 0.09927353205666113 4.620123081344336 0.014345252603505445 0.061850581471634476 2.6057700094553184e-06 5.584063918643496 0.32630131804890783 KNIIEATHMYDNAAEACSTTEEVFNS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KNIIEATHMYDNAAEACSTTEEVFNSPR 28 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KNIIEATHMYDNAAEACS(0.001)T(0.001)T(0.002)EEVFNS(0.997)PR;KNIIEATHMYDNAAEACSTTEEVFNS(1)PR 111.56 5.994399999999999e-16 5570600.0 1172.21 1733.28 1644.4099999999999 1224.71 2137.7 2002.8700000000001 1877.04 1716.4 2221.7 1833.66 2116.4300000000003 True False 1370.0503902170476 1821.4965485625416 1877.6120648078556 1524.7640049793215 1823.2471617940664 2214.8123740024944 2218.073871200694 1959.7049562545462 1718.4884973258704 1419.4349324678212 1590.8620205035427 0.8612000114148156 1.1449745641586178 1.1802482180155072 0.9584514466545001 1.1460749821766245 1.3922089693872117 1.394259113998224 1.231850990844735 1.0802247304778394 0.8922426421485246 1.0 10.635592997158437 -4.1047701653740365 16.266977050042893 1.1002929165743753 1.0900206081270356 0.0 0.17332435940563826 0.0 0.0 0.022963950268841588 0.0 7.856513021100633e-05 4.1047701653740365 -0.010272308447339729 KNIIEATHMYDNAAEACSTTEEVFNS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KNIIEATHMYDNAAEACSTTEEVFNSPR 28 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KNIIEATHMYDNAAEACSTTEEVFNS(1)PR;KNIIEATHMYDNAAEACSTTEEVFNS(1)PR 187.76 4.5533999999999994e-67 11078200.0 2357.8999999999996 2754.0 3323.6000000000004 2959.8 3310.8 2850.9 2970.2 2922.7 2838.9 3281.2 3423.3999999999996 True False 2597.2722722057633 2986.089245163839 3549.15948243039 3142.620123806485 3078.260829639942 2827.6832156128835 3083.2325863558035 2864.4044556862045 2719.5909055406833 3074.0244720269043 3002.343502720607 0.8650816503348855 0.9945861432770638 1.1821297194056175 1.0467223756904447 1.0252860230185326 0.941825348448819 1.0269419816759469 0.9540562074561397 0.90582270252431 1.0238750060548845 1.0 11.551873332014102 -7.213595943612762 6.940041136835809 0.9594746981261512 1.0316832887348963 0.06010803765524453 0.07721789335226069 0.36196891342677906 43.796504102117204 0.011602955028702844 0.020093710886305717 6.115106941083445e-08 7.213595943612762 0.07220859060874518 KNKLEGDS(ph)DVDSELEDRVDGVK ddPTM_A549_PD325901_60min_R1 1 KNKLEGDSDVDSELEDRVDGVK 22 3 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 1 KNKLEGDS(1)DVDSELEDRVDGVK 145.87 1.8583e-27 10864000.0 3779.1 3609.1 4018.9 4265.3 4318.2 4426.0 4993.7 5984.7 4847.6 4565.7 5055.9 True False 4162.751449973621 3913.2515231375532 4291.6467216089495 4528.7578938008655 4014.904528981276 4389.956123435621 5183.737986157492 5865.330463593676 4643.872229983093 4277.420922812766 4434.056351990744 0.9388133842964544 0.8825443820488735 0.9678827648823505 1.0213577668600455 0.905469892636506 0.9900542020546663 1.1690735468055489 1.322791141560557 1.0473191726348154 0.9646744613185501 1.0 12.114411390054718 -7.531177722535089 24.717792869674277 1.0610708323943554 0.9457756692580649 0.34353038255294666 0.09781509620660817 203.86825106315246 607202.1573632614 0.016388900498156677 0.024332079762466492 2.94321696037365e-08 7.531177722535089 -0.11529516313629051 KNKS(ph)PPADPPR ddPTM_A549_MK2206_60min_R1 4 KNKSPPADPPR 11 2 O60566;O60566-3;O60566-2 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 KNKS(1)PPADPPR;KNKS(1)PPADPPR;KNKS(1)PPADPPR;KNKS(1)PPADPPR 72.891 0.00035839 64198000.0 7065.700000000001 7867.6 6957.8 6250.0 10015.8 7363.800000000001 6774.6 6753.300000000001 10354.8 10943.300000000001 10611.6 True False 8258.217420220433 8268.02723476337 7944.520663654499 7781.250280573165 8542.48908785003 8143.032428305172 8005.457128157221 7710.60095611386 8009.454333217765 8471.20092954807 7976.446854739072 1.0353253234946276 1.0365551711600838 0.9959974420107113 0.9755283802774999 1.070964207926071 1.0208846841958368 1.0036369920023869 0.9666711377300453 1.0041381180216957 1.0620268753517799 1.0 12.961530519004238 -7.800054674806666 5.152520028367214 0.9987950855008232 1.0220856805262044 0.026212296104341837 0.031175289136228832 0.2699504546703019 16.977984809628957 0.0038640891247642356 0.005459890675687344 1.5846936774358085e-08 7.800054674806666 0.023290595025381222 KNKS(ph)PPADPPR ddPTM_A549_PD325901_60min_R1 4 KNKSPPADPPR 11 2 O60566;O60566-3;O60566-2 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 KNKS(1)PPADPPR;KNKS(1)PPADPPR;KNKS(1)PPADPPR;KNKS(1)PPADPPR 76.357 0.00030856 86612000.0 10394.1 9299.5 9924.300000000001 10139.0 13015.0 10806.1 10547.7 11203.5 11419.6 11940.5 12333.400000000001 True False 11449.301380268007 10083.201501598085 10597.822677663957 10765.263002660295 12100.87129931251 10718.098704351043 10949.098495422912 10980.037403524273 10939.67392472872 11186.574792221516 10816.469987864211 1.0585062772895237 0.9322081522817671 0.9797857054616181 0.9952658320818742 1.1187449614235847 0.9909054170516316 1.0122617182599782 1.0151220699399692 1.0113904015822852 1.034216782811079 1.0 13.400942124376652 -6.533023753563924 24.997423193913978 1.0138598034772097 0.9848966470164597 0.0871806180714545 0.04302760528530248 396.7306375336964 977548.9431991841 0.005764577279491394 0.012010721724878765 2.930732945593992e-07 6.533023753563924 -0.028963156460749984 KNLS(ph)PGAVESDVR ddPTM_A549_MK2206_60min_R1 2 KNLSPGAVESDVR 13 1 A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2;A0A3B3IU78 A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin 1 KNLS(0.993)PGAVES(0.007)DVR;KNLS(0.988)PGAVES(0.012)DVR 66.809 0.0019714000000000003 11371400.0 2778.3 2952.1000000000004 2352.2 2712.1000000000004 3546.5 2457.8 2200.35 2842.0 4135.5 4059.8999999999996 3722.2 True False 3247.209117086549 3102.34928056141 2685.7773297663202 3376.564621750798 3024.81454802014 2717.8827646444 2600.12511320827 3244.8622032599737 3198.815853036476 3142.765770276994 2797.875012506101 1.1605983478790114 1.108823398720226 0.9599347067904319 1.2068318301060759 1.0811113915023551 0.9714096421376412 0.9293213962689836 1.1597595277687187 1.1433019126080424 1.1232688223131058 1.0 11.45011580010786 -5.525659589598325 24.988663038603782 1.0632537389999388 1.1476546497070659 0.10322775326551048 0.0860618484695866 127.16512404993186 1142726.373070085 0.012268785529028811 0.04805788709954735 2.980851977051424e-06 5.525659589598325 0.08440091070712707 KNNPS(ph)PPPDSDLER ddPTM_A549_MK2206_60min_R1 2 KNNPSPPPDSDLER 14 1 E7ESD5;E9PLN6;F2Z2Y1;O95677-3;O95677-5;O95677-2;O95677-4;O95677 E7ESD5 EYA4 Eyes absent homolog;Eyes absent homolog 4 1 KNNPS(0.997)PPPDS(0.003)DLER;KNNPS(0.998)PPPDS(0.002)DLER 59.9 0.0030377 48988000.0 4125.3 4763.9 4776.4 5284.4 5630.4 4043.2 4142.3 4842.4 6528.6 6884.9 7015.6 True False 4821.549786098383 5006.3621617379185 5453.765342188527 6579.078237225733 4802.175618545777 4471.0487403410525 4894.902291200317 5528.82502922804 5049.882524031903 5329.596308229285 5273.432899290154 0.9143094978505183 0.9493554307691703 1.0341964041910248 1.2475892578648966 0.9106355784278943 0.8478440563722526 0.9282193183607609 1.048429957262235 0.9576081881522864 1.010650255727477 1.0 12.364526717947992 KNQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_A549_MK2206_60min_R1 4 KNQKPSQVNGAPGSPTEPAGQK 22 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KNQKPSQVNGAPGS(1)PTEPAGQK;KNQKPSQVNGAPGS(0.962)PT(0.038)EPAGQK;KNQKPSQVNGAPGS(0.986)PT(0.014)EPAGQK;KNQKPSQVNGAPGS(0.998)PT(0.002)EPAGQK 254.68 1.1219999999999996e-110 854930000.0 13151.27 14533.78 14864.43 12979.05 21847.21 16442.05 15567.95 16273.19 24234.75 22635.940000000002 22823.16 True False 15370.882858318686 15273.487323206462 16972.42968875878 16158.917832651696 18633.514349824083 18181.936817650527 18396.445000191186 18579.96451705426 18745.617819943356 17522.465432656903 17155.539484828536 0.8959719903831583 0.8902947841840554 0.9893264915258603 0.9419067145595625 1.0861514653213087 1.0598289161194658 1.0723326431360578 1.0830300343212997 1.0926860001412957 1.021388190569749 1.0 14.066386874133386 -6.239131068622133 1.2349498489036235 1.0531013248880616 0.8910586384435148 0.7302476560278133 0.03735952467529533 0.24470864801744563 0.658389535622976 0.006663726231915717 0.03165183054144045 5.765924234662588e-07 6.239131068622133 -0.16204268644454678 KNQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_A549_PD325901_60min_R1 4 KNQKPSQVNGAPGSPTEPAGQK 22 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KNQKPSQVNGAPGS(0.974)PT(0.026)EPAGQK;KNQKPSQVNGAPGS(1)PTEPAGQK;KNQKPSQVNGAPGS(0.885)PT(0.115)EPAGQK;KNQKPSQVNGAPGS(0.993)PT(0.007)EPAGQK 230.9 2.1009999999999998e-88 1412196000.0 19251.38 16714.24 19336.620000000003 17815.329999999998 21990.83 21675.23 22542.46 22954.1 22301.69 20974.16 21949.83 True False 21205.7659254831 18122.807663430383 20648.919313742084 18915.742472549962 20446.269965044998 21498.714113279595 23400.325651007443 22496.262468356912 21364.42752551608 19649.847958127473 19250.14006143654 1.1015902148142926 0.9414377041201626 1.0726633285701486 0.9826288230724891 1.0621361662715714 1.1168081917672683 1.2155924879676534 1.1686285084971029 1.109832315886109 1.0207638955049299 1.0 14.232581322250745 -6.983587059730464 20.079784723493837 1.080864691607857 1.0221138929884626 0.1805553603011405 0.07075937366844524 46.03139441738366 56310.38466348241 0.011816714716843037 0.022317489896121468 1.0385153982265795e-07 6.983587059730464 -0.05875079861939447 KNQKPSQVNGAPGSPTEPAGQK ddPTM_A549_MK2206_60min_R1 2 KNQKPSQVNGAPGSPTEPAGQK 22 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 0 ; 184.26 7.476599999999998e-50 51565000.0 1306.04 1623.01 1631.6 1328.0900000000001 2272.06 1491.27 1465.65 1657.56 2540.1 2075.8900000000003 2238.29 False True 1526.4676223876882 1705.6142765637937 1862.985414185328 1653.4721096202265 1937.8429837796818 1649.0752015750904 1731.9396333191073 1892.5242060646042 1964.7714057061905 1606.9450072317816 1682.4608193386387 0.9072827163890389 1.0137616620601344 1.1072979487971981 0.9827700536112293 1.151790853912088 0.9801566744498265 1.0294085980557446 1.1248548461345684 1.167796232234713 0.9551158569407032 1.0 10.716357192823672 -5.365431022784998 2.624838905608254 1.0736822743297836 0.8913991095800954 0.22922024622455905 0.07229961499767638 0.3564535391992096 3.61747927643968 0.010239245070729213 0.12667884100248356 4.310910209904208e-06 5.365431022784998 -0.1822831647496882 KNQKPSQVNGAPGSPTEPAGQK ddPTM_A549_PD325901_60min_R1 2 KNQKPSQVNGAPGSPTEPAGQK 22 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 0 ; 98.816 8.5917e-08 33135000.0 682.04 607.28 618.16 525.8499999999999 640.51 634.0699999999999 741.71 937.56 930.6700000000001 868.21 652.42 False True 751.2801987086893 658.4576168493452 660.1120548980533 558.3305602080003 595.5227872395432 628.9063441452384 769.9361799292856 918.8596302984089 891.5571763921048 813.391072430354 572.176476031132 1.3130218213791305 1.1507946314338142 1.1536861135516812 0.9758013193426387 1.04080264076977 1.0991475016722285 1.3456271136309237 1.605902494754807 1.5581856537974752 1.4215737740083143 1.0 9.160316374938677 -7.7571741740592515 24.668086463214223 1.3069962106520185 1.1145839200667538 0.32532981430634766 0.17280270789852697 150.89660000633572 872714.2790552027 0.03711672947718476 0.05397544878843281 1.7491450522787827e-08 7.7571741740592515 -0.19241229058526477 KNQS(ph)SEDILR ddPTM_A549_MK2206_60min_R1 3 KNQSSEDILR 10 1 Q13625;Q13625-3;Q13625-2;H0Y847 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KNQS(0.959)S(0.041)EDILR;KNQS(0.977)S(0.023)EDILR;KNQS(0.964)S(0.036)EDILR 102.73 0.0001635 62262000.0 4412.9 4194.4 4982.6 3827.6 5918.799999999999 5318.3 4780.799999999999 5021.1 8255.8 8025.2 7963.4 True False 5157.689634953471 4407.8770442690875 5689.207602794691 4765.362171827492 5048.15236058695 5881.078975998175 5649.409476322442 5732.856301473842 6385.874481803537 6212.301746256538 5985.868001340901 0.8616443987401812 0.7363805956432173 0.9504398696263007 0.796102114306563 0.8433450853670859 0.9824939298161517 0.9437911886892446 0.9577318277298494 1.066825142213799 1.0378280551567314 1.0 12.547344749948056 -7.569090712501603 0.9293703127959276 1.0290792454311455 0.8271300780637357 0.6572852580438935 0.05766241498725613 0.22342190326481762 0.3873414579053843 0.010367463488384493 0.020236843688948396 2.697176005675827e-08 7.569090712501603 -0.20194916736740975 KNQS(ph)SEDILR ddPTM_A549_PD325901_60min_R1 2 KNQSSEDILR 10 1 Q13625;Q13625-3;Q13625-2;H0Y847 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KNQS(0.97)S(0.03)EDILR;KNQS(0.952)S(0.048)EDILR 82.85 0.00081806 47815800.0 6755.1 6098.200000000001 6741.299999999999 7065.4 8687.0 7320.8 6174.0 6646.3 7776.799999999999 7986.5 8487.9 True False 7440.8727791582105 6612.116715634762 7198.805156730046 7501.813711312367 8076.855088523072 7261.181832003504 6408.954948542436 6513.734332578518 7449.968140550484 7482.231027015381 7443.942109231241 0.9995876741076177 0.8882547202288245 0.9670689335161271 1.0077743218891182 1.0850238986285174 0.9754484553283809 0.8609624919832038 0.8750382844193305 1.000809521518413 1.0051436345450158 1.0 12.861851120412489 -8.910942270647926 23.691604428081295 1.0004000359400054 0.9574329663476602 0.09363752690078819 0.061726967035290514 27.142939742640714 7211.2327265743925 0.011461174534051955 0.012201306141593347 1.2276024015053332e-09 8.910942270647926 -0.0429670695923452 KNQSS(ph)EDILR ddPTM_A549_PD325901_60min_R1 1 KNQSSEDILR 10 1 Q13625;Q13625-3;Q13625-2;H0Y847 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KNQS(0.336)S(0.664)EDILR 127.02 9.754799999999999e-07 47320000.0 3139.9 3390.5 2781.9 3471.7 3661.1 3696.0 3494.1 4167.5 3515.6 3643.4 3896.0 True False 3458.660336527788 3676.229333960786 2970.696462923669 3686.1390241972363 3403.9569661093387 3665.901001404896 3627.069887544885 4084.3759431594967 3367.85155782832 3413.3551022134684 3416.816698778839 1.0122463806044684 1.0759223154331516 0.8694339570470339 1.0788225852193511 0.9962363410732287 1.0728995215678614 1.061534816556355 1.1953746142189137 0.9856693685183583 0.9989868942730794 1.0 11.738437138558616 -3.8839351391649912 16.620378234128403 1.0173483547807323 0.34683520543119273 0.0 0.07858625695034956 0.0 0.0 0.010029561795514183 0.0 0.00013063659761760788 3.8839351391649912 -0.6705131493495395 KNQTALDALHAQTVSQTAAS(ph)SPQDAYR ddPTM_A549_MK2206_60min_R1 1 KNQTALDALHAQTVSQTAASSPQDAYR 27 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 KNQTALDALHAQTVSQTAAS(0.5)S(0.5)PQDAYR 126.64 2.3180999999999997e-19 4048900.0 1022.8 1014.5 899.19 1013.6 1433.5 1038.3 1189.5 976.8 1623.3 1327.7 1939.3 True False 1195.4236349408338 1066.1337167201489 1026.708663018697 1261.9320455022334 1222.6340489459678 1148.172216832241 1405.6167528626072 1115.2643913245392 1255.6251418774286 1027.7716478723034 1457.7182880428463 0.8200649225206792 0.7313715725907202 0.7043258436423755 0.8656899318979675 0.8387313646092031 0.787650279378599 0.9642581590643338 0.7650753924627709 0.8613633732778705 0.70505505508352 1.0 10.509496222630862 -14.99999999973026 0.09804783487977871 1.6356480198506929 0.6743946667640678 0.0 0.10800803869940405 53.511013285059576 0.3784871854476839 6.930121727743611 0.44397408514945313 1.0000000006210989e-15 14.99999999973026 -0.9612533530866251 KNQTALDALHAQTVSQTAAS(ph)SPQDAYR ddPTM_A549_PD325901_60min_R1 1 KNQTALDALHAQTVSQTAASSPQDAYR 27 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 KNQTALDALHAQTVSQTAAS(0.577)S(0.423)PQDAYR 166.19 2.0147999999999996e-42 4974200.0 1137.4 950.99 1143.5 1257.5 1555.2 1435.8 920.84 1544.6 1676.1 1234.1 1300.6 True False 1252.8680106903755 1031.1332647996956 1221.1047864241034 1335.1729190102901 1445.9681171487377 1424.1073208379723 955.8830701029832 1513.7917412847412 1605.6593457947567 1156.1787153871767 1140.6344451826903 1.0983957357957126 0.9039997600936411 1.0705487560727875 1.170552866125695 1.267687577957672 1.2485221070190278 0.8380275329576634 1.3271488930375794 1.4076896875910014 1.0136277404826195 1.0 10.15562079002917 -6.145012461881897 3.3332522929305552 1.1890891380269972 0.9989831299220139 0.10901278462572639 0.1613200609671818 0.36616640623485136 7.565849291299476 0.025952195135068523 0.07675124500443836 7.161228610995007e-07 6.145012461881897 -0.19010600810498335 KNQTALDALHAQTVSQTAASS(ph)PQDAYR ddPTM_A549_PD325901_60min_R1 1 KNQTALDALHAQTVSQTAASSPQDAYR 27 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 KNQTALDALHAQTVSQTAAS(0.165)S(0.835)PQDAYR 142.37 3.7718e-33 6049600.0 1385.7 1523.6 1028.0 1546.0 1793.7 1619.4 1560.1 1900.6 1408.1 1473.2 1652.6 True False 1526.3752439015766 1651.9991190746648 1097.7662618661825 1641.4929087792516 1667.7166999290705 1606.2121433103591 1619.4704592194778 1862.6910420081447 1348.922453799652 1380.181900582116 1449.3406766945363 1.0531514560004833 1.139828023624042 0.7574245858950305 1.1325790652084302 1.1506726656789743 1.1082364340822852 1.1173842597952546 1.2851988990306427 0.9307145486843681 0.9522825949588688 1.0 10.501181034014492 KNRS(ph)SDGGSEEPPDRR ddPTM_A549_PD325901_60min_R1 1 KNRSSDGGSEEPPDRR 16 3 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 KNRS(0.48)S(0.48)DGGS(0.04)EEPPDRR 56.036 0.0032865999999999998 5911000.0 463.59 468.41 522.75 407.09 358.1 525.58 566.42 773.34 706.52 863.37 1237.8 True False 510.6533155230795 507.884554585038 558.2269585511152 432.2350247315299 332.9482913779342 521.2998507354935 587.9754230569166 757.9151270265065 676.8274213894823 808.8566708563545 1085.5584470606902 0.4704061001098087 0.46785555946822616 0.5142302195359422 0.3981683583245748 0.30670692331623495 0.48021352709933746 0.5416340544803893 0.6981799359386623 0.6234831696276626 0.7451065145745522 1.0 10.084221688196553 -9.978970901972213 0.348497100864967 1.095105387278442 0.4146633135440038 0.6966574477392091 0.10046116971661605 0.4552192432821882 0.10412373442967536 0.11860669572753436 0.03534429945641524 1.0496127510697965e-10 9.978970901972213 -0.6804420737344381 KNRSSDGGS(ph)EEPPDRR ddPTM_A549_PD325901_60min_R1 1 KNRSSDGGSEEPPDRR 16 3 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 KNRS(0.216)S(0.216)DGGS(0.569)EEPPDRR 42.633 0.022330000000000003 11053000.0 921.02 924.92 955.9 1183.9 1159.1 1015.0 1064.5 1864.5 1673.0 1997.4 2480.7 True False 1014.5212723809117 1002.8662544070222 1020.7731222936609 1257.026814168017 1077.68881467792 1006.7341765221772 1105.0101300167516 1827.3110848280448 1602.6896280142175 1871.2838231215837 2175.5896264529433 0.46632014606310457 0.46096296940066034 0.46919378079491847 0.5777867291164921 0.49535482315889307 0.46274084242787333 0.5079129430389626 0.839915332657323 0.7366690889343982 0.860127204307599 1.0 11.087190736601773 -9.001805438061048 0.390466738503049 1.0086245123517366 0.44096618493150713 0.8188442469642803 0.0801428991740181 0.25947350182526385 0.10470667898593178 0.05158125467243041 0.038758960438293445 9.958514543236378e-10 9.001805438061048 -0.5676583274202294 down KNS(ph)FGYR ddPTM_A549_MK2206_60min_R1 4 KNSFGYR 7 1 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 KNS(1)FGYR;KNS(1)FGYR;KNS(0.995)FGY(0.005)R;KNS(0.999)FGY(0.001)R 109.66 0.0036025999999999996 359041000.0 15397.699999999999 16601.1 15798.999999999998 14345.2 22683.399999999998 17129.600000000002 17112.4 18655.1 24919.2 25937.0 26240.000000000004 True False 17996.455322378257 17446.025080968804 18039.53576778254 17859.7746439805 19346.70190851829 18942.24290229179 20221.501573506568 21299.517553847698 19275.040987785404 20077.813685971167 19723.88381284189 0.912419455171454 0.8845126673079462 0.9146036317673552 0.9054897510779445 0.980876894839645 0.9603708418703426 1.0252291975245102 1.0798845580290803 0.9772436894622015 1.0179442282507687 1.0 14.26765603906619 -6.8579039419907675 1.689119752080812 0.998355918828176 0.8996823187249242 0.7152841425861223 0.030706737143130027 0.17164301359188489 0.988640314534106 0.004901114992176895 0.011360243281629866 1.387062587862735e-07 6.8579039419907675 -0.09867360010325177 KNS(ph)FGYR ddPTM_A549_PD325901_60min_R1 3 KNSFGYR 7 1 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 KNS(1)FGYR;KNS(1)FGYR;KNS(1)FGYR 96.14299999999999 0.0049378 333055000.0 17740.7 19000.0 19315.8 17964.2 21585.9 20779.9 19190.9 21246.5 22860.800000000003 21542.699999999997 22005.9 True False 19541.722803986937 20601.196680505793 20626.68634334124 19073.807834341664 20069.780851312335 20610.675383953887 19921.22020116343 20822.7218899432 21900.040076573474 20182.49024549982 19299.313806893544 1.0125604982394145 1.06745746955766 1.068778224434776 0.988315337280472 1.039921991638044 1.0679486115507348 1.0322242749401662 1.0789358677874603 1.1347574476327222 1.0457620642600678 1.0 14.236261932483693 -7.552087752521666 1.7136712771990992 1.0651588281863795 1.0373392514282433 0.07861973153397894 0.03787562709521001 0.9517840389941882 5.611245689654645 0.008585634766704505 0.014430032547318544 2.8048668358937536e-08 7.552087752521666 -0.027819576758136177 KNS(ph)FGYRK ddPTM_A549_PD325901_60min_R1 1 KNSFGYRK 8 2 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 KNS(0.999)FGY(0.001)RK 48.004 0.007471899999999999 8333100.0 3571.8 3917.3 3980.2 3495.4 4304.5 5602.3 4945.9 4479.7 4773.2 4280.1 5439.4 True False 3934.4065065798122 4247.4246187655435 4250.3203068869425 3711.3029193706275 4002.16676971884 5556.676726236646 5134.118931000325 4390.348869243337 4572.599003250125 4009.8537555535636 4770.388283197544 0.8247560309582637 0.8903729354119864 0.8909799484997046 0.7779875974546411 0.8389603806078919 1.164826927361154 1.07624759793326 0.9203336518134597 0.9585381171918268 0.8405717768671438 1.0 12.21989098306172 KNS(ph)ITEIS(ph)DNEDDLLEYHR ddPTM_A549_PD325901_60min_R1 1 KNSITEISDNEDDLLEYHR 19 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 2 KNS(0.996)IT(0.004)EIS(1)DNEDDLLEYHR 142.4 3.6018e-21 7509700.0 2452.9 2902.6 2076.9 2648.4 2747.0 3388.1 2626.2 2692.8 2748.6 2600.8 2625.6 True False 2701.91660227046 3147.2122886755865 2217.8509234142725 2811.9856530471984 2554.0601966355334 3360.508436920974 2726.141478111783 2639.0899915392647 2633.0859005139737 2436.585044144695 2302.667845049723 1.1733853009147812 1.3667678104080299 0.9631658027371208 1.2211859643988199 1.1091743874941642 1.4593978215943726 1.1839056527290481 1.1461010311203947 1.1434935812277849 1.058157410493601 1.0 11.169090605102625 -9.802292848557626 0.6314523604091503 1.0068487833124784 1.208394577031666 0.22569155274259856 0.1228121201186993 0.6780469439079284 0.5654953518059416 0.061710928797076826 0.028006248290607886 1.5765478312414336e-10 9.802292848557626 0.20154579371918757 KNS(ph)ITEISDNEDDLLEYHR ddPTM_A549_MK2206_60min_R1 2 KNSITEISDNEDDLLEYHR 19 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KNS(0.971)IT(0.029)EISDNEDDLLEYHR;KNS(0.983)IT(0.017)EISDNEDDLLEYHR 150.53 9.577e-22 15488900.0 1642.72 1732.74 1785.02 1400.12 2358.5 2029.02 1929.27 1530.69 2394.9 2862.0 2941.2 True False 1919.9709753519824 1820.9290648690696 2038.162677144579 1743.1494628537762 2011.5677742860585 2243.72954964553 2279.793386124624 1747.669995041523 1852.4589738694362 2215.472212254673 2210.81886700955 0.8684433645841908 0.8236446196662586 0.9219039639830315 0.7884632652930251 0.9098745285302331 1.0148861958467434 1.0311986296771438 0.7905079973401428 0.8379062624769223 1.0021048061940132 1.0 11.110365114261379 -6.97823202653753 24.139315417220832 0.9267711737254635 0.8532032061835432 0.22862589899834196 0.0775702731784922 257.5853918545651 285643.62367310026 0.012620030947911521 0.023848087173870332 1.0514000018884862e-07 6.97823202653753 -0.0735679675419203 KNS(ph)ITEISDNEDDLLEYHR ddPTM_A549_PD325901_60min_R1 1 KNSITEISDNEDDLLEYHR 19 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KNS(0.957)IT(0.043)EISDNEDDLLEYHR 147.39 1.8238e-21 12058000.0 918.12 880.36 765.61 711.47 943.85 1126.9 811.7 901.26 1273.1 1043.5 838.99 True False 1011.3268665157788 954.5510268236887 817.5688985869335 755.4158860343944 877.5572321057333 1117.722900022505 842.5896876792827 883.2836622752081 1219.596034324506 977.6132319151753 735.7995487958058 1.3744597535713297 1.297297651766554 1.111129926520001 1.0266598929976136 1.1926580188067868 1.5190589636154943 1.1451348251820044 1.2004406141873447 1.6575112560485685 1.3286407059030096 1.0 9.52316898140193 -7.073434697446987 24.99570745723358 1.3097279826417467 1.1910161095045417 0.0765561173894872 0.18548181114866294 389.26890438504034 132497.65543818887 0.03783346929855883 0.06552950914290202 8.444332052963723e-08 7.073434697446987 -0.11871187313720499 KNS(ph)LKEDHEETK ddPTM_A549_MK2206_60min_R1 1 KNSLKEDHEETK 12 2 Q8WUM9 Q8WUM9 SLC20A1 Sodium-dependent phosphate transporter 1 1 KNS(1)LKEDHEETK 90.75399999999999 5.5789e-05 13093000.0 2404.3 2883.1 2619.7 2148.6 2783.7 2637.5 2478.8 3346.7 3397.8 4027.2 4044.2 True False 2810.0870605086525 3029.8374752842374 2991.2128521336745 2675.0070964543206 2374.221417545091 2916.598499369193 2929.165873893088 3821.104973838899 2628.203725171644 3117.4527229881273 3039.9135257582006 0.9243970385005521 0.9966854154275819 0.9839795858626013 0.8799615758106584 0.7810161037238466 0.9594346926831575 0.9635688150578261 1.2569781809454126 0.8645652920393944 1.025507040438128 1.0 11.569814569602588 -7.48762026380309 24.950531278450544 0.9652999915048148 0.9149598383541634 0.093950816288627 0.10902596890172957 1819.5614152228623 1287606.7525808709 0.017533015830841204 0.028021585836524112 3.2537166986658e-08 7.48762026380309 -0.050340153150651434 KNS(ph)LKEDHEETK ddPTM_A549_PD325901_60min_R1 1 KNSLKEDHEETK 12 2 Q8WUM9 Q8WUM9 SLC20A1 Sodium-dependent phosphate transporter 1 1 KNS(1)LKEDHEETK 66.965 0.0010321 24746000.0 6835.3 6601.8 6162.7 5996.2 7760.6 7541.9 6574.5 7468.7 7897.5 6838.2 8286.4 True False 7529.214624118091 7158.156855019115 6580.9378813256 6366.571655641749 7215.522228616574 7480.481266908977 6824.696195204439 7319.730919418198 7565.595539296039 6406.434884985483 7267.225331817497 1.036050800730445 0.9849917304310276 0.9055640331548299 0.8760663616370212 0.9928854410259503 1.029344890980303 0.9391061765106459 1.0072249841175036 1.041056963814265 0.8815517054269274 1.0 12.82718892471976 -7.849582269602526 1.0294803732757842 1.0186298985396318 0.9564459176332151 0.0 0.06259062763594282 0.5640672349211315 1.2035956127616476 0.00919773695168238 0.014897724381389107 1.4138968613145344e-08 7.849582269602526 -0.06218398090641675 KNS(ph)LRVEGDNIYVR ddPTM_A549_MK2206_60min_R1 3 KNSLRVEGDNIYVR 14 2 O43491;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 KNS(1)LRVEGDNIYVR;KNS(1)LRVEGDNIYVR;KNS(1)LRVEGDNIYVR 155.79 1.2495e-19 55142000.0 5630.65 8023.3 6590.1 5133.21 9229.3 7190.6 6016.299999999999 6863.799999999999 9678.800000000001 9117.9 9856.3 True False 6580.9660638244095 8431.6516997149 7524.67527459104 6390.846680438552 7871.68219597978 7951.504519266018 7109.3838337514035 7836.764669505918 7486.567253867598 7058.160057343432 7408.708689958593 0.8882743726641505 1.138073050590146 1.0156527391594736 0.8626127639625509 1.0624904454198179 1.0732645663397598 0.9595982419159117 1.0577774073000727 1.0105090599681064 0.9526842467041149 1.0 12.855006392788663 -5.996572322171408 24.99947882933338 1.0046170595372759 1.0290959730001987 0.0 0.0783578748015561 450.4513843307166 3285191.220316186 0.009514210009089294 0.02937110955508215 1.0079237479085682e-06 5.996572322171408 0.024478913462922858 KNS(ph)LRVEGDNIYVR ddPTM_A549_PD325901_60min_R1 4 KNSLRVEGDNIYVR 14 2 O43491;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 KNS(1)LRVEGDNIYVR;KNS(1)LRVEGDNIYVR;KNS(1)LRVEGDNIYVR;KNS(1)LRVEGDNIYVR 167.99 6.1779e-23 116284000.0 10559.6 10794.699999999999 12695.300000000001 12092.2 12484.3 12623.6 11625.2 13346.4 12440.9 12375.7 16225.099999999999 True False 11631.602818433348 11704.40725300294 13556.879401040605 12839.107730621257 11607.445836496901 12520.797586941233 12067.603347553535 13080.195581951753 11918.05223739514 11594.296189949831 14229.515559383102 0.8174278857134626 0.8225443237443824 0.9527295110268914 0.902287057984557 0.8157302185064776 0.8799173474802435 0.848068460039458 0.9192298590465032 0.8375585372290656 0.8148061078793665 1.0 13.796598926025762 -10.849499854657859 0.8810944040991163 1.0078958896214116 0.8661370952449788 0.0 0.06906937235762683 0.39864556604694606 0.49682972987689217 0.03928874378000907 0.007676886075513137 1.4141651983383439e-11 10.849499854657859 -0.1417587943764328 KNS(ph)RVTFSEDDEIINPEDVDPSVGR ddPTM_A549_PD325901_60min_R1 1 KNSRVTFSEDDEIINPEDVDPSVGR 25 2 A0A0A0MT09;Q12972-2;Q12972 A0A0A0MT09 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay 1 KNS(0.333)RVT(0.333)FS(0.333)EDDEIINPEDVDPSVGR 41.83 0.024214 4069500.0 1305.7 1643.8 1413.1 1201.1 1547.5 1596.0 1745.1 1636.4 1815.9 1455.5 1869.0 True False 1438.2537027944638 1782.3287949166013 1509.0014636606054 1275.2892191039837 1438.80893858518 1583.0027051521126 1811.5107354553622 1603.7607182690338 1739.584037962354 1363.5994816028153 1639.1248485671597 0.8774521989900359 1.0873661005594681 0.9206141100110211 0.7780305571102636 0.8777909381600274 0.9657609098757144 1.1051694671329604 0.9784249928679689 1.061288308503779 0.8319070281893446 1.0 10.678710030221433 -7.526585424930667 23.24366373926842 1.030507152031879 0.9126662038089923 0.11325998972940243 0.09571429004072332 39.03599898486147 244783.266442861 0.01173913093072526 0.01746857006628859 2.9745041218119225e-08 7.526585424930667 -0.1178409482228866 KNS(ph)SNFK ddPTM_A549_PD325901_60min_R1 1 KNSSNFK 7 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 KNS(0.935)S(0.065)NFK 46.818999999999996 0.025507 10587000.0 8999.4 9696.1 8205.0 8778.1 9053.7 8706.8 7907.1 8457.5 9905.5 10871.0 11632.0 True False 9913.012462991876 10513.224375465914 8761.840640673174 9320.303300488455 8417.799345569394 8635.894707530342 8208.009017431139 8288.8085277196 9489.20628230414 10184.603204743533 10201.337741323272 0.9717365226362953 1.03057311129689 0.8588913398270281 0.9136354012409618 0.8251662241777199 0.8465453185172294 0.8046012420687125 0.8125217239052428 0.930192345643606 0.9983595743025004 1.0 13.316470730395869 -9.471781963647048 1.4360343635733375 0.9819223610178456 0.8838203932763878 0.2885712564120203 0.06684874111118476 0.36662944329918457 1.5501108004696909 0.0173723157877753 0.013933679331080874 3.3745668534066876e-10 9.471781963647048 -0.09810196774145774 KNS(ph)SNFKK ddPTM_A549_MK2206_60min_R1 1 KNSSNFKK 8 2 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 KNS(0.885)S(0.115)NFKK 42.743 0.015643 7927400.0 4182.4 3741.3 2758.9 2235.1 5481.7 4694.0 4694.7 4761.5 5128.2 6139.3 6694.4 True False 4888.286870137414 3931.7161896156645 3150.1535052683903 2782.699600337452 4675.349191564079 5190.715964374979 5547.666220818894 5436.457206482185 3966.6708880526307 4752.427866070974 5031.995723959175 0.9714409825235918 0.7813433089569857 0.626024678492741 0.5530011854119827 0.9291242377856223 1.0315422049466534 1.102478325727588 1.0803779463875975 0.7882897970612053 0.9444419524132194 1.0 12.296914980920324 -6.877841036151458 10.801353082449 0.9394922796043688 0.728916709528108 0.4408141867275325 0.12952546379397586 0.32757301976565434 29.505132184020255 0.021633456915863863 0.04091077504278447 1.3248263697233613e-07 6.877841036151458 -0.2105755700762607 KNS(ph)SNFKK ddPTM_A549_PD325901_60min_R1 1 KNSSNFKK 8 2 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 KNS(0.892)S(0.108)NFKK 51.927 0.0057909 12394000.0 7012.2 7661.3 6264.9 5202.3 7163.5 4787.7 5207.0 6445.3 5618.9 7767.9 9691.4 True False 7724.073381891193 8306.944638334686 6690.073787904132 5523.634255719466 6660.360472733397 4748.710558556873 5405.155234379729 6316.743435259962 5382.757173251097 7277.433468321894 8499.419238846318 0.9087766075343793 0.977354382093316 0.7871212843963936 0.6498837274050298 0.7836253614002751 0.5587100041909978 0.6359440665870021 0.7431970653229449 0.6333088205190986 0.8562271449160458 1.0 13.053148550634658 -3.7777818064466047 10.785490849618895 0.7892534140850157 49.66534427704452 0.0 0.1417813380309606 0.0 0.0 0.022856421769408074 0.0 0.00016680850633827646 3.7777818064466047 48.8760908629595 KNS(ph)SPSDSKPPFSQGQEK ddPTM_A549_MK2206_60min_R1 2 KNSSPSDSKPPFSQGQEK 18 2 Q70EL1-7;Q70EL1;Q70EL1-8;Q70EL1-9;Q70EL1-10 Q70EL1-7 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 KNS(0.492)S(0.492)PS(0.014)DS(0.002)KPPFSQGQEK;KNS(0.393)S(0.393)PS(0.209)DS(0.004)KPPFSQGQEK 55.126999999999995 0.0021715999999999997 9239200.0 1963.0 2089.65 2039.62 1838.25 2630.4 1847.17 1909.65 2316.3999999999996 2290.7 2501.1000000000004 3191.3999999999996 True False 2294.306409257781 2196.0042593832018 2328.868785536088 2288.6213325221775 2243.471644469809 2042.6363033477887 2256.608686090017 2644.7567936774817 1771.8601074962273 1936.0997729106095 2398.887301840839 0.9564044161212553 0.9154261885075008 0.9708120859821049 0.9540345354139619 0.9352134394759735 0.851493232625112 0.9406897457660301 1.1024931399019744 0.7386174857553964 0.8070824216814607 1.0 11.228149667014383 -8.769478338377175 24.999579333727784 0.8765693928419107 0.948245655890768 0.22380657410917515 0.08210913898246934 341.95908822443323 1063422.9142020438 0.01827487816076197 0.019619449027986603 1.7002847578711683e-09 8.769478338377175 0.07167626304885732 KNS(ph)SPSDSKPPFSQGQEK ddPTM_A549_PD325901_60min_R1 1 KNSSPSDSKPPFSQGQEK 18 2 Q70EL1-7;Q70EL1;Q70EL1-8;Q70EL1-9;Q70EL1-10 Q70EL1-7 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 KNS(0.467)S(0.467)PS(0.056)DS(0.01)KPPFSQGQEK 78.916 7.0191e-05 6147900.0 1727.3 1693.4 2140.1 1722.0 2193.5 2481.6 1609.7 2081.7 1978.7 2287.6 2223.3 True False 1902.6542244289474 1836.1087609878173 2285.3400554667464 1828.3640290542492 2039.4361271641944 2461.3906723718574 1670.9580143616379 2040.178860437941 1895.542120114603 2143.1605455957415 1949.8481946599059 0.9757960797357406 0.9416675441792908 1.1720605028256352 0.9376955775642595 1.0459461063428657 1.2623498993987967 0.856968259856295 1.0463270248552814 0.9721485627988722 1.0991422570563516 1.0 10.929146092054115 KNS(ph)SQDDLFPTSDTPR ddPTM_A549_MK2206_60min_R1 2 KNSSQDDLFPTSDTPR 16 1 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 KNS(0.566)S(0.434)QDDLFPTSDTPR;KNS(0.5)S(0.5)QDDLFPTSDTPR 139.0 2.9557e-11 31359000.0 3545.0 3593.8999999999996 3821.6000000000004 3437.1 4084.5 3575.1 3084.3 3308.2 5247.7 5552.9 5126.3 True False 4143.309333071233 3776.814159211966 4363.560344968531 4279.189654297281 3483.675460704433 3953.4147090406864 3644.677386174138 3777.1474809375936 4059.104328854918 4298.496033343461 3853.2982313175085 1.0752630822594191 0.9801510115454024 1.1324221700526294 1.1105264626335847 0.9040762618348658 1.025982021559994 0.9458591490666842 0.9802375145113339 1.05341037344702 1.115536814256324 1.0 11.91187813434816 KNS(ph)SQDDLFPTSDTPR ddPTM_A549_PD325901_60min_R1 1 KNSSQDDLFPTSDTPR 16 1 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 KNS(0.616)S(0.384)QDDLFPTSDTPR 155.87 1.3946e-20 20135000.0 2764.8 3285.6 3067.5 2786.2 3948.1 3466.4 2971.0 3304.2 3309.9 3252.8 3506.1 True False 3045.4804606618154 3562.489042814201 3275.6789963759848 2958.297246080691 3670.7990762055897 3438.1707876812557 3084.0630307935826 3238.2951389052437 3170.796413487303 3047.417652873679 3074.8719269990984 0.9904414014518103 1.1585812766813315 1.0653058319644755 0.9620879556332683 1.1938055188490673 1.1181508919094125 1.0029891013390773 1.05314797356963 1.0311962542719044 0.991071408898577 1.0 11.586310605965608 -8.541855166595075 0.9363019043162539 1.0106222099661322 1.0789715916277758 0.16331235869519456 0.06592868628218075 0.6735367680822455 1.1659324242029725 0.013899612515067128 0.016146415579228697 2.8717381218550064e-09 8.541855166595075 0.06834938166164362 KNS(ph)STDQGS(ph)DEEGSLQK ddPTM_A549_MK2206_60min_R1 2 KNSSTDQGSDEEGSLQK 17 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 2 KNS(0.652)S(0.165)T(0.188)DQGS(0.981)DEEGS(0.014)LQK;KNS(0.683)S(0.163)T(0.175)DQGS(0.936)DEEGS(0.043)LQK 70.315 0.00031873 46797000.0 3481.9 4098.700000000001 3713.5 3200.5 5590.0 3765.5 3468.5 4090.1 5496.7 5490.7 5939.5 True False 4069.5595957181163 4307.306323036842 4240.1301394810125 3984.6226436759052 4767.718405028222 4163.9627106633925 4098.681553008783 4669.884200405918 4251.706226426208 4250.347056543235 4464.558228139273 0.9115257070830538 0.9647777233341248 0.9497311767055177 0.8925009911532963 1.067903734568448 0.9326707140739519 0.918048627336869 1.045990210402569 0.9523240619034827 0.9520196264333827 1.0 12.124301711161014 -6.406051329799055 0.006616173802562355 1.9047323804355933 1.0739872241379364e-08 0.059505349028122545 0.05084145898753083 12874.475884122316 18.588476136466763 2586.5297184293304 2766.500721017544 3.9259853095403345e-07 6.406051329799055 -1.904732369695721 KNS(ph)STDQGS(ph)DEEGSLQK ddPTM_A549_PD325901_60min_R1 1 KNSSTDQGSDEEGSLQK 17 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 2 KNS(0.647)S(0.243)T(0.11)DQGS(0.948)DEEGS(0.052)LQK 163.63 3.4764000000000004e-23 65013000.0 6714.3 7883.2 6404.0 6802.8 7908.6 6292.9 6444.1 7381.5 6421.3 8781.9 8272.9 True False 7395.930793193582 8547.544930092805 6838.613950380378 7222.993505720238 7353.127219188857 6241.652708804348 6689.333751846825 7234.270191825275 6151.435091672261 8227.409335271572 7255.385746233952 1.0193711336482119 1.1780965518655673 0.9425569073195167 0.9955354213205648 1.0134715749614884 0.8602785471529475 0.9219818195495744 0.997089671707719 0.8478439750588426 1.1339726960130503 1.0 12.824836604589454 -6.1508574700375656 1.0525083083785622 0.9298541993140366 1.0979091753755619 0.0901698544725098 0.0916613219780204 0.5455919477332867 0.9720196590562459 0.011497835432476903 0.07158825440602373 7.065493968030402e-07 6.1508574700375656 0.1680549760615253 KNS(ph)STDQGS(ph)DEEGSLQKEQESAMDKHNLER ddPTM_A549_PD325901_60min_R1 1 KNSSTDQGSDEEGSLQKEQESAMDKHNLER 30 3 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 2 KNS(0.889)S(0.054)T(0.058)DQGS(0.998)DEEGSLQKEQESAMDKHNLER 65.71 0.00033468 30247000.0 1757.1 2382.7 2612.0 2862.4 2899.8 3808.1 2295.0 2706.6 2588.4 3546.1 3608.2 True False 1935.4794984913453 2583.498491086378 2789.2660272319736 3039.203947017936 2696.1280517669175 3777.088096171529 2382.3374808721883 2652.614739713377 2479.6185494034657 3322.1986408187877 3164.4142742643257 0.611639099921995 0.8164223351214023 0.8814478084985987 0.9604317524842733 0.8520148811405936 1.1936136576332566 0.7528525895763261 0.8382640545160813 0.7835947933776579 1.049862108080379 1.0 11.627722769524137 -14.999840896713689 0.016177877671307874 1.9957056896070686 1.3109764284496219e-06 0.16756572120638258 0.13803894742264808 7253.0097100158855 9.125094935001199 712.5656317535577 443.14463652020333 1.0003664159692436e-15 14.999840896713689 -1.99570437863064 KNS(ph)STDQGSDEEGSLQK ddPTM_A549_PD325901_60min_R1 1 KNSSTDQGSDEEGSLQK 17 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 KNS(0.919)S(0.074)T(0.006)DQGSDEEGSLQK 198.48 1.6119e-48 19274000.0 3940.9 3794.9 3798.1 3652.8 4475.1 3784.4 4144.3 4121.4 4078.4 3932.7 4974.1 True False 4340.977266862754 4114.709541202708 4055.861905830687 3878.4251598892947 4160.78441425689 3753.581101113819 4302.013604347974 4039.195443824245 3906.9990310180406 3684.3886508412193 4362.317233417822 0.9951081121768056 0.9432394117698965 0.9297494172960387 0.8890745336396814 0.9538014297499787 0.8604557853700462 0.9861762394060002 0.9259288647972962 0.8956246925574817 0.8445943872712224 1.0 12.090878973127012 -10.965047058865382 1.2188889721803016 1.0001786098225989 0.9268772756097474 0.0 0.05958802301814038 0.42965159274770004 1.1305411247341608 0.02631817674712912 0.006033657066363642 1.0838094692702383e-11 10.965047058865382 -0.07330133421285145 KNS(ph)TDLDSAPEDPTS(ph)PKR ddPTM_A549_MK2206_60min_R1 1 KNSTDLDSAPEDPTSPKR 18 2 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4;I3L373 I3L2J0 CIC Protein capicua homolog 2 KNS(0.841)T(0.156)DLDS(0.003)APEDPT(0.156)S(0.844)PKR 92.275 3.9158e-06 6177600.0 1121.8 1477.2 1493.1 1279.2 2007.3 1610.6 1401.1 1436.3 2685.5 1804.2 2165.9 True False 1311.132414623218 1552.3831703686587 1704.8440315764358 1592.6040574254694 1712.028829054232 1781.032622970247 1655.6617338678418 1639.8999234842713 2077.2385378622785 1396.62996692868 1628.0472542010018 0.8053405152952293 0.9535246390194756 1.047171098490703 0.9782296265147863 1.0515842366593013 1.0939686292117645 1.0169617187680418 1.0072802980703939 1.2759080134204868 0.8578559150078879 1.0 10.668926859212235 -3.94424676345661 0.4406846441184788 1.115468754091793 5.433727649694627e-12 0.12303764509105819 0.10943255010439282 10.05225205875625 0.5424327936824722 0.022667897392957704 7.620170561212466 0.00011369810765918707 3.94424676345661 -1.1154687540863593 KNS(ph)TGSGHSAQELPTIR ddPTM_A549_MK2206_60min_R1 1 KNSTGSGHSAQELPTIR 17 1 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 KNS(0.961)T(0.032)GS(0.007)GHSAQELPTIR 61.703 0.0013942 5289700.0 1141.9 1260.4 1239.4 1378.8 1512.4 1432.9 1400.5 818.35 1883.8 1500.6 1602.5 True False 1334.624803225399 1324.548976396329 1415.165556718127 1716.6060618966844 1289.9279634641648 1584.52852691796 1654.9527216343665 934.3536185917658 1457.1223078104485 1161.6134177880372 1204.5550232499672 1.107981601060029 1.0996168301408185 1.1748450916753632 1.4250955985930558 1.0708750854600697 1.3154471952993894 1.3739121000626415 0.7756836346676961 1.2096768347526694 0.9643506484692822 1.0 10.234284581066849 -12.184781245656197 0.3198150418937187 0.775939959030363 1.1953542344967543 0.17396170767202945 0.1651975530350545 12.779992654661562 0.7867781883725271 2.1688393663999763 0.06041664788954566 6.534596176957288e-13 12.184781245656197 0.4194142754663913 KNS(ph)TGSGHSAQELPTIR ddPTM_A549_PD325901_60min_R1 2 KNSTGSGHSAQELPTIR 17 1 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 KNS(0.895)T(0.104)GS(0.001)GHSAQELPTIR;KNS(0.892)T(0.067)GS(0.039)GHS(0.002)AQELPTIR 127.54 2.5183e-12 38563000.0 10753.2 10694.2 10870.2 12050.400000000001 14389.900000000001 12156.5 12343.2 11850.7 12926.4 13960.0 15113.0 True False 11844.856947912549 11595.43776529816 11607.917139822734 12794.725839555946 13379.203066460026 12057.50149447473 12812.927230458201 11614.328491805694 12383.148360766865 13078.563217571496 13254.19680920037 0.8936684069524657 0.8748502781586293 0.8757918195212798 0.9653339258305351 1.0094314471905896 0.9097119703326756 0.9667071807447538 0.8762755419282469 0.9342813102164842 0.9867488317732721 1.0 13.694161626556385 KNS(ph)VHEQEAINSDPELSNCENFQK ddPTM_A549_MK2206_60min_R1 2 KNSVHEQEAINSDPELSNCENFQK 24 1 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 KNS(1)VHEQEAINSDPELSNCENFQK;KNS(1)VHEQEAINSDPELSNCENFQK 269.19 3.190999999999999e-125 53473000.0 5620.3 5946.8 4797.3 4295.1 7099.0 4894.8 5014.799999999999 4541.5 7940.1 8052.700000000001 8200.5 True False 6568.869236857622 6249.466719163506 5477.629276459475 5347.399692814366 6054.746503988433 5412.764487094721 5925.92424737738 5185.271532760442 6141.6800277342345 6233.589477156962 6164.089527713794 1.0656673961862388 1.0138507383881845 0.8886355806209515 0.8675084404229393 0.9822612855907179 0.8781125684107749 0.9613624560017142 0.8412063954372209 0.9963645077056706 1.011274974046158 1.0 12.589672100481485 -8.94099994199216 24.999793444782007 0.9983970496512456 0.9351598321425938 0.16930117472925532 0.06404605831347497 97.69851267353094 41397.0432674214 0.01095594314734552 0.011663261805211746 1.1455130944494033e-09 8.94099994199216 -0.06323721750865186 KNS(ph)VHEQEAINSDPELSNCENFQK ddPTM_A549_PD325901_60min_R1 1 KNSVHEQEAINSDPELSNCENFQK 24 1 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 KNS(1)VHEQEAINSDPELSNCENFQK 247.51 1.3420999999999997e-100 41109000.0 3116.0 2954.7 3105.7 3333.6 3409.9 3111.9 3429.4 3071.7 3179.3 3761.4 4205.6 True False 3432.334026122039 3203.70293852055 3316.471478091247 3539.50890084509 3170.400387516383 3086.5577181471585 3559.907693639687 3010.4325337979653 3045.6850773135666 3523.9045620754605 3688.3378614949424 0.9305910019671731 0.8686034357009903 0.8991777875650003 0.9596487723634055 0.8595742870018337 0.836842456969527 0.9651793917265484 0.8162030288021903 0.8257608689023683 0.9554180485643378 1.0 11.848755101160789 -10.969311215227714 1.2598902455448049 0.9994675046409881 0.8792586731969534 0.32634609110803925 0.05006597140856985 0.3394677290183753 0.965217087890595 0.03455770934437412 0.008141922552759973 1.073220067706979e-11 10.969311215227714 -0.12020883144403471 KNSDDAPWS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KNSDDAPWSPK 11 1 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 KNS(0.001)DDAPWS(0.999)PK;KNSDDAPWS(1)PK 77.078 0.00049083 8411000.0 2902.3 3169.0 2745.3 2552.6 3952.6000000000004 2920.6 3365.4 3036.5 4609.0 4521.9 4816.1 True False 3392.1372855776167 3330.2885641066036 3134.624820766721 3177.987114590569 3371.1777759775605 3229.6559534626226 3976.849617556804 3466.9331738912438 3565.0688590605987 3500.3996494040566 3620.129452401976 0.9370209905965973 0.9199363193757999 0.8658874943510321 0.8778656002154721 0.9312312778596261 0.8921382497301935 1.0985379583368606 0.9576820993489376 0.9847904352412469 0.9669266514990291 1.0 11.82182557230182 -7.68830143611127 24.999999999966406 0.9966517659634972 0.903052273388319 0.5989236174809711 0.039660802174695975 21.26202744796722 7267.286822243739 0.005558065466157343 0.00824394242019766 2.0497389974300428e-08 7.68830143611127 -0.0935994925751783 KNSDDAPWS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KNSDDAPWSPK 11 1 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 KNSDDAPWS(1)PK;KNSDDAPWS(1)PK 77.75399999999999 0.00046567 12529100.0 5448.9 5202.8 5486.9 5268.9 5785.6 5950.9 5480.4 5022.2 6351.6 6640.3 6489.0 True False 6002.06831673183 5641.258215228187 5859.274029410071 5594.347986459892 5379.239415236459 5902.437843414609 5688.959620989952 4922.0282811603165 6084.664340283978 6221.030324759312 5690.894137160136 1.0546793126127234 0.9912780099689715 1.0295875987484033 0.9830349768642117 0.9452362468160058 1.03717231443002 0.999660068150354 0.8648954210939692 1.0691930290097333 1.0931551659233156 1.0 12.47443962715941 KNSFGY(ph)R ddPTM_A549_PD325901_60min_R1 1 KNSFGYR 7 1 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 KNS(0.139)FGY(0.861)R 80.18 0.0062792 320400000.0 4563.7 3991.5 4880.1 3956.7 5192.9 4366.9 4694.7 4770.0 5146.8 5171.4 5689.8 True False 5027.003464381628 4327.877713170466 5211.292932425247 4201.096372682315 4828.168618532456 4331.337414241082 4873.359377538411 4674.858608007392 4930.497894479124 4844.876921443352 4989.990670613923 1.0074174074083293 0.8673117845003915 1.0443492335796487 0.8419046547366491 0.9675706704153902 0.8680051126645081 0.9766269516770133 0.9368471639711984 0.9880775776826293 0.9709190339723186 1.0 12.284821402935723 -8.74042873291928 1.5788345230814518 0.9961686413912147 0.9343608716148111 0.10285665417086332 0.05921244546575748 0.41492755214397714 2.0265116351895123 0.01001765990032092 0.010831141071749813 1.8179053471930345e-09 8.74042873291928 -0.061807769776403676 KNSNMSDEFISLSPGT(ph)PPSTLSSSSYR ddPTM_A549_PD325901_60min_R1 1 KNSNMSDEFISLSPGTPPSTLSSSSYR 27 1 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 KNS(0.001)NMS(0.001)DEFIS(0.015)LS(0.378)PGT(0.545)PPS(0.024)T(0.027)LS(0.002)S(0.002)S(0.002)S(0.002)Y(0.002)R 47.718999999999994 0.0035993 3955700.0 797.58 1213.0 580.61 658.76 922.79 1034.0 862.22 963.89 1063.7 902.36 988.31 True False 878.5497344526364 1315.2237670238696 620.01368609156 699.4501090474895 857.9764138526773 1025.579446821607 895.0322539248879 944.6644577929233 1018.9963881163912 845.3848356022792 866.754135413274 1.0136089330958176 1.5174127394232304 0.7153282121878005 0.806976373656397 0.9898728818220044 1.1832414809680765 1.0326253055581105 1.0898874538885253 1.1756464105366249 0.9753456038593854 1.0 9.759479004532501 -7.186091404776214 24.99949098147069 1.087530791427901 1.0094062798721481 0.026582694880731172 0.19682060224807083 434.8249807411692 144267.23961137058 0.029084983112067555 0.050376702452844695 6.514912620397497e-08 7.186091404776214 -0.07812451155575295 KNSRVT(ph)FSEDDEIINPEDVDPSVGR ddPTM_A549_PD325901_60min_R1 2 KNSRVTFSEDDEIINPEDVDPSVGR 25 2 A0A0A0MT09;Q12972-2;Q12972 A0A0A0MT09 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay 1 KNS(0.273)RVT(0.363)FS(0.363)EDDEIINPEDVDPSVGR;KNS(0.391)RVT(0.526)FS(0.083)EDDEIINPEDVDPSVGR 130.87 4.689600000000001e-24 13858600.0 1757.02 1769.88 1782.3 1992.88 2306.7200000000003 2391.8 1828.81 2380.5 2256.5 2562.0 3041.7 True False 1935.3913769502385 1919.0339989944002 1903.25759584056 2115.9756714411333 2144.70394495199 2372.321973798764 1898.40636531323 2333.019060033877 2161.6671521901253 2400.2348827663445 2667.590182924948 0.7255205051130188 0.7193886119682095 0.7134745089493786 0.7932161712789846 0.8039855442114329 0.8893127546291876 0.7116559273102713 0.874579264449001 0.810344544685612 0.8997764717122123 1.0 11.381321329567204 -14.999999999923611 0.12383776054667338 1.747319593772516 0.6750218078207474 0.6062295201366779 0.056503247680383145 26.77632307913605 0.22941739519842932 4.973567420702796 0.16688874207114207 1.0000000001758914e-15 14.999999999923611 -1.0722977859517688 KNSS(ph)QDDLFPTSDTPR ddPTM_A549_PD325901_60min_R1 1 KNSSQDDLFPTSDTPR 16 1 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 KNS(0.205)S(0.795)QDDLFPTSDTPR 142.04 1.3031e-14 18911000.0 3394.2 3360.6 4044.9 3225.6 3497.3 3816.6 4035.8 3788.5 4085.4 4156.4 4186.8 True False 3738.7766853220223 3643.809556026727 4319.411237959652 3424.837986130887 3251.661713030014 3785.5188749896956 4189.384577474498 3712.9353954792464 3913.704845361198 3893.9641946643383 3671.8501423119224 1.018226926594548 0.9923633631007773 1.176358258248525 0.9327281488602616 0.8855649296685776 1.0309568005970429 1.1409465024726522 1.0111892510791454 1.0658672586504294 1.0604910450437297 1.0 11.842291464504443 -7.501793531579771 24.943906382614056 1.0396763179950097 1.0016848250551291 0.08959333070768982 0.07560109668884457 2072.596030426449 2451891.0685215034 0.011634431729865577 0.018470702827814097 3.149245144387282e-08 7.501793531579771 -0.03799149293988058 KNSS(ph)TDQGSDEEGSLQK ddPTM_A549_MK2206_60min_R1 1 KNSSTDQGSDEEGSLQK 17 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 KNS(0.075)S(0.759)T(0.166)DQGSDEEGSLQK 206.85 1.6066999999999999e-49 10109000.0 3198.4 3353.8 3446.0 3500.0 4632.8 4041.3 3235.3 4129.1 4979.0 5424.5 5438.6 True False 3738.211726627656 3524.494094761984 3934.6946171136565 4357.50015712097 3951.3212570330497 4468.947683602172 3823.1121315984765 4714.412569838408 3851.2644498291893 4199.1016825211345 4088.0455222759883 0.9144251712115072 0.8621464892102642 0.9624879653793691 1.0659128264048694 0.9665551020657865 1.0931746379169769 0.9351931407725587 1.1532191958600535 0.9420796389970303 1.027166077197525 1.0 11.997195546103022 -5.915993795885359 5.222822472259508 0.9960824161477332 0.8900033949904883 0.33056333298815554 0.06669828848562781 0.18880941530577067 8.71699352294227 0.008907800665283927 0.02884098383595602 1.2134061844575036e-06 5.915993795885359 -0.10607902115724488 KNSS(ph)TDQGSDEEGSLQK ddPTM_A549_PD325901_60min_R1 1 KNSSTDQGSDEEGSLQK 17 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 KNS(0.078)S(0.739)T(0.183)DQGSDEEGSLQK 177.91 9.897799999999998e-31 26016000.0 3700.4 4527.7 4417.4 3713.5 5680.2 4386.7 4328.6 4970.3 5248.9 4985.2 5809.8 True False 4076.061883909496 4909.265168964532 4717.191327984118 3942.874461029592 5281.242347626197 4350.976169605749 4493.327241700805 4871.163467375082 5028.306986541439 4670.433621220448 5095.2314313566 0.7999758085226462 0.9635019007679195 0.9258051163199413 0.7738361866675417 1.036506863088665 0.8539310192721327 0.8818691166898499 0.9560239869375551 0.9868652786989613 0.9166283581307217 1.0 12.314931961433478 -8.483516371422093 2.8394660859096703 0.9938323369970112 0.8947046095704012 0.1707653813532335 0.0722324094494331 0.23028609769460737 3.710873379263303 0.010783099198998293 0.012818260250161424 3.284608622144253e-09 8.483516371422093 -0.09912772742661002 KNSSQDDLFPTS(ph)DTPR ddPTM_A549_PD325901_60min_R1 1 KNSSQDDLFPTSDTPR 16 1 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 KNSSQDDLFPT(0.075)S(0.462)DT(0.462)PR 72.086 0.00039523 6825000.0 2134.7 2207.6 2116.4 2205.6 2278.7 2307.8 2350.9 2319.4 2664.5 2492.2 2504.6 True False 2351.413172516918 2393.642199572875 2260.031630947069 2341.834902718961 2118.651973088237 2289.0060419486517 2440.364785961842 2273.1377474659002 2552.520331048346 2334.8420666784864 2196.5500779675267 1.0705028745316323 1.0897280346950788 1.0289005716811528 1.0661422774780835 0.9645361580140394 1.042091443718267 1.1109989298399776 1.0348672540028043 1.1620587923996706 1.0629587233626476 1.0 11.101023675698425 -7.687354291006235 24.82564531580152 1.0770347656169545 1.042500260052934 0.08708661503513238 0.04873892885109066 93.24910051480298 31244.653487395666 0.009947075470624107 0.014753895051712613 2.054214114801861e-08 7.687354291006235 -0.03453450556402049 KNSSQSLMVPQSGS(ph)PEPESIR ddPTM_A549_MK2206_60min_R1 4 KNSSQSLMVPQSGSPEPESIR 21 1 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;B7ZB24;H0YGQ3;A0A075B6R8 F5H1U9 MPDZ Multiple PDZ domain protein 1 KNSSQSLMVPQS(0.047)GS(0.939)PEPES(0.014)IR;KNSSQSLMVPQS(0.083)GS(0.914)PEPES(0.002)IR;KNSSQSLMVPQS(0.034)GS(0.966)PEPESIR;KNSSQSLMVPQS(0.165)GS(0.831)PEPES(0.004)IR 121.97 2.7359e-15 46086600.0 3566.25 4259.56 4170.52 4248.68 6009.299999999999 4186.97 3985.04 3738.2200000000003 6689.700000000001 5485.6 6794.400000000001 True False 4168.145813558614 4476.353409948224 4761.962447639249 5289.606790730492 5125.33993047157 4630.03238631425 4709.070184806727 4268.124132818616 5174.493631255741 4246.399150085342 5107.162964099583 0.8161372258645906 0.8764853288243223 0.9324085565925945 1.0357231261100113 1.0035591122703076 0.9065761987351321 0.922052070378169 0.8357133231935368 1.0131835752313865 0.8314594971680136 1.0 12.318306379300287 -5.723893882319439 2.1744551661192255 0.9824096450513337 0.8234492453633713 0.06374850468854831 0.07332088324947947 0.25228254545939166 2.2033925345125316 0.0089958617516852 0.053820183687985114 1.8884527266877605e-06 5.723893882319439 -0.15896039968796238 KNSSQSLMVPQSGS(ph)PEPESIR ddPTM_A549_PD325901_60min_R1 2 KNSSQSLMVPQSGSPEPESIR 21 1 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;B7ZB24;H0YGQ3;A0A075B6R8 F5H1U9 MPDZ Multiple PDZ domain protein 1 KNSSQSLMVPQS(0.123)GS(0.873)PEPES(0.004)IR;KNSSQSLMVPQS(0.134)GS(0.866)PEPESIR 110.36 8.9129e-11 37585000.0 2118.1000000000004 1932.1 1780.05 2163.08 2048.3 1589.75 1932.87 2057.08 2204.1 2156.8999999999996 2420.4 True False 2333.1279527371926 2094.9248477055385 1900.8548973102118 2296.6885388888877 1904.4344742513883 1576.8036030799335 2006.426425557048 2016.0499256519577 2111.4693419642163 2020.7129659011432 2122.706144179749 1.099129033537873 0.9869123210716735 0.8954865950344415 1.0819625435137035 0.8971729221555983 0.7428270782573336 0.9452210005885513 0.9497546003622629 0.9947063788144472 0.95195134354406 1.0 11.05168895092303 -5.2837952614762855 4.309003631076229 0.9669785033819022 1.1065695362181627 0.1821898683817651 0.0833312250597439 0.2718715390560764 11.411066198801532 0.011907864998141754 0.11046797745271907 5.202411949320955e-06 5.2837952614762855 0.1395910328362605 KNSST(ph)DQGS(ph)DEEGSLQK ddPTM_A549_PD325901_60min_R1 1 KNSSTDQGSDEEGSLQK 17 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 2 KNS(0.334)S(0.163)T(0.502)DQGS(0.999)DEEGS(0.001)LQK 182.13 1.5749e-39 52079000.0 8622.2 8895.6 8397.1 8202.2 10467.0 8113.1 9082.8 10258.0 9657.7 11555.0 12253.0 True False 9497.519396671836 9645.263431110918 8966.97770186431 8708.831265452243 9731.834029189706 8047.0296034897365 9428.450924298868 10053.396142754671 9251.820454556426 10825.415328011364 10745.958678166611 0.8838224379150718 0.897571237707059 0.8344511616337412 0.8104285086398707 0.9056273451862996 0.7488424108534406 0.8773950474475 0.9355513494743775 0.8609581268308857 1.0073940959782575 1.0 13.391506575069045 -10.874531579716635 0.45676570951439993 1.0428437888814819 0.8533273753701147 0.5762430312523614 0.04750067149748079 1.1984823008279493 0.2974868509226919 0.1061375674664946 0.01230747567590059 1.334960514399539e-11 10.874531579716635 -0.18951641351136717 KNSSTDQGS(ph)DEEGSLQK ddPTM_A549_MK2206_60min_R1 3 KNSSTDQGSDEEGSLQK 17 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 KNSSTDQGS(1)DEEGSLQK;KNSSTDQGS(1)DEEGSLQK;KNSSTDQGS(1)DEEGSLQK 221.48 8.261599999999998e-64 52591100.0 9172.6 10712.16 11231.5 9536.81 12707.0 10506.199999999999 8951.970000000001 10197.17 12269.699999999999 11787.499999999998 12243.8 True False 10720.710631460992 11257.36318866526 12824.295586799784 11873.328878123668 10837.817132861108 11617.959110548865 10578.427072823431 11642.650075023408 9490.632540684717 9124.695563225707 9203.326548310732 1.1648734373582317 1.2231841529877636 1.3934413300975048 1.2901127451902719 1.1775978040082025 1.2623651947546444 1.1494134232110995 1.2650480251795926 1.0312176245041225 0.9914562430581736 1.0 13.167939703148111 -8.786125209963302 7.02045502457537 1.014273395970187 1.242578053176244 0.7194851585500495 0.06481389387947527 0.06554067769282765 11.877695943810348 0.011442732509058032 0.012302642282959748 1.636344684450011e-09 8.786125209963302 0.22830465720605697 KNSSTDQGS(ph)DEEGSLQK ddPTM_A549_PD325901_60min_R1 2 KNSSTDQGSDEEGSLQK 17 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 KNSSTDQGS(1)DEEGSLQK;KNSSTDQGS(1)DEEGSLQK 246.22 5.104299999999999e-75 106616000.0 8109.9 7964.0 9236.099999999999 9686.1 10534.400000000001 9081.900000000001 9494.5 8859.900000000001 9145.3 7681.4 8878.3 True False 8933.21107780716 8635.154229660428 9862.917287181173 10284.38839827083 9794.500085707094 9007.940017494351 9855.81839308975 8683.182344042909 8760.954844637427 7196.395093084078 7786.3253841807455 1.1472948582339635 1.1090153318283131 1.2666972930799143 1.3208269486355306 1.2579104522919502 1.156892317369054 1.2657855800778035 1.1151835963192962 1.1251719408537444 0.9242350836897708 1.0 12.92672691965492 -9.358780197326078 0.583309076834455 1.0114535824875148 1.221084097683528 0.6353680496082768 0.06926818730296239 0.36474302437484024 0.2799043397932848 0.029683060335487208 0.01863426370732235 4.377435974241331e-10 9.358780197326078 0.20963051519601317 KNSSTDQGS(ph)DEEGSLQKEQESAMDK ddPTM_A549_PD325901_60min_R1 1 KNSSTDQGSDEEGSLQKEQESAMDK 25 2 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 KNS(0.001)S(0.001)T(0.006)DQGS(0.991)DEEGSLQKEQESAMDK 100.86 3.9952e-12 15683000.0 2577.8 2463.4 1934.3 2285.2 2636.2 2193.6 2437.9 2199.5 2411.4 1972.0 2305.5 True False 2839.4963583239387 2670.999363303051 2065.573229890812 2426.3516139342464 2451.0424063962832 2175.7360488857607 2530.675618570068 2155.6292470256303 2310.057243869387 1847.487583456375 2021.938115768639 1.4043438501798584 1.3210094525013054 1.021580835625914 1.2000127971334424 1.2122242452828584 1.0760646094545063 1.2516088394762925 1.066120288358167 1.1424965115666854 0.9137211317439621 1.0 10.981523126888202 -2.0000000000000004 0.12586077395251255 0.9759551072133463 2.0562810576299375 0.5381597401896347 0.09563945673363927 50.50286687805786 0.41654061572927126 0.2755347589537073 9.698199769642791 0.00999999999999999 2.0000000000000004 1.0803259504165912 KNSSTDQGS(ph)DEEGSLQKEQESAMDKHNLER ddPTM_A549_MK2206_60min_R1 2 KNSSTDQGSDEEGSLQKEQESAMDKHNLER 30 3 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 KNS(0.009)S(0.009)T(0.009)DQGS(0.967)DEEGS(0.004)LQKEQES(0.002)AMDKHNLER;KNSST(0.001)DQGS(0.999)DEEGSLQKEQESAMDKHNLER 114.7 4.0906e-21 19490500.0 2145.3 2507.3 2405.6 1774.61 2892.6 2247.2 1925.1 1909.46 3113.6 3460.0 3867.2 True False 2507.3741924506962 2634.9108604558196 2746.750252736103 2209.389529665269 2467.102371804051 2484.9972124293663 2274.8657511019774 2180.1318024759994 2408.374571397501 2678.3835969256374 2906.867510709687 0.8625691343732904 0.9064433968001963 0.9449175934631804 0.7600585584053211 0.8487151074875542 0.8548711639845861 0.7825832249735346 0.7499935220452268 0.8285119849887884 0.9213985801065054 1.0 11.505249602438965 -10.579990618387107 0.940418395354705 0.9970885299640179 0.838227169421874 0.363833379088328 0.059867198901330486 0.3583564169926615 0.5811351626607372 0.03663717563104621 0.010896680714761135 2.6303248114582842e-11 10.579990618387107 -0.15886136054214384 KNSSTDQGS(ph)DEEGSLQKEQESAMDKHNLER ddPTM_A549_PD325901_60min_R1 4 KNSSTDQGSDEEGSLQKEQESAMDKHNLER 30 3 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 KNSSTDQGS(0.999)DEEGSLQKEQESAMDKHNLER;KNS(0.002)S(0.002)T(0.002)DQGS(0.985)DEEGS(0.008)LQKEQESAMDKHNLER;KNS(0.002)S(0.001)T(0.001)DQGS(0.99)DEEGS(0.005)LQKEQESAMDKHNLER;KNS(0.002)S(0.002)T(0.002)DQGS(0.991)DEEGS(0.001)LQKEQESAMDKHNLER 113.7 4.4188000000000006e-21 68548000.0 12945.1 14926.1 14390.7 16577.3 17631.8 19165.199999999997 15999.999999999998 18258.0 16954.199999999997 16484.4 19768.3 True False 14259.277022321055 16183.97483015251 15367.339440309006 17601.242171220107 16393.40319440786 19009.1249654018 16608.888755535947 17893.82986687608 16241.673933818665 15443.57217075469 17336.924421578467 0.8224801975010743 0.9334974552931122 0.8863936339932352 1.0152459423144657 0.9455773582310684 1.0964531253157002 0.9580066424505855 1.032122505223848 0.9368255602247078 0.8907907651447561 1.0 14.081560366039586 -5.312885141809307 0.9887360492394357 0.9822523251622608 0.7631612750394856 0.40418952217183834 0.056472683126130574 1.2054917688596491 0.9471770994961668 0.007372884442578279 0.27425100530597585 4.865358631860231e-06 5.312885141809307 -0.2190910501227752 KNST(ph)GSGHSAQELPTIR ddPTM_A549_MK2206_60min_R1 1 KNSTGSGHSAQELPTIR 17 1 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 KNS(0.382)T(0.509)GS(0.108)GHS(0.001)AQELPTIR 72.771 0.0004327 7240000.0 1232.2 1072.5 1606.7 984.14 1197.4 1350.0 1201.6 1068.8 1870.9 1722.3 1502.1 True False 1440.1652356023626 1127.0856689821192 1834.5542197668353 1225.254344179723 1021.2640461861887 1492.8561039425265 1419.9151662376685 1220.3056730627238 1447.1441372133825 1333.2312338107015 1129.0871141490024 1.2755129498469397 0.9982273775497015 1.6248119359236035 1.0851725511925643 0.9045042082124191 1.322179737271821 1.2575780455238517 1.0807896554398932 1.2816939623866852 1.180804578409845 1.0 10.140941085478294 -10.934564745415528 1.1130419698463558 0.996440246904581 1.2061592445417302 0.018647044647881805 0.18976412110745008 0.8017079802195389 1.7142956717115865 0.13390505145483347 0.02929331661769765 1.1626132135790697e-11 10.934564745415528 0.20971899763714918 KNSTDLDSAPEDPTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KNSTDLDSAPEDPTSPK 17 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4;I3L373 I3L2J0 CIC Protein capicua homolog 1 KNSTDLDSAPEDPT(0.184)S(0.816)PK 94.463 1.4791e-06 11456000.0 4470.5 5047.5 5416.6 4727.9 6626.4 5447.5 5042.8 4057.4 4224.7 4542.9 4422.0 True False 4924.341868991839 5472.870539202793 5784.2030486618305 5019.93164516004 6160.984523838987 5403.137366112868 5234.70651352604 3976.471974031274 4047.150550789994 4256.060518703837 3878.122033367566 1.2697748618074787 1.4112166899633192 1.4914958835473053 1.2944233322129328 1.5886515356735946 1.393235519569521 1.3498044848734387 1.025360197491853 1.043585146616867 1.0974539950224538 1.0 11.921142486292501 -8.209641309379535 3.391534443033092 1.0200013244061539 1.4129252274418844 0.8043856778082408 0.08502005009199669 0.06580605363776877 1.5349539181422749 0.0126954559786021 0.01637160252349272 6.171044676980153e-09 8.209641309379535 0.39292390303573055 KNSTDLDSAPEDPTS(ph)PKRK ddPTM_A549_PD325901_60min_R1 1 KNSTDLDSAPEDPTSPKRK 19 3 I3L2J0;A0A0A0MQR4;Q96RK0;I3L135;I3L1Q4;I3L373 I3L2J0 CIC Protein capicua homolog 1 KNSTDLDSAPEDPT(0.187)S(0.813)PKRK 66.85300000000001 0.00050882 3302100.0 1963.8 2061.2 2213.9 2163.2 2377.8 2309.5 2175.2 2428.0 1826.4 1563.5 2237.1 True False 2163.1635303268486 2234.9045577820284 2364.148567262198 2296.815951016348 2210.791530964678 2290.6921977122847 2257.978426315113 2379.571635270847 1749.6427594770873 1464.7803431714215 1961.950882145314 1.1025574340380615 1.1391236030018501 1.2049988553623203 1.1706796392909047 1.1268332714564528 1.1675583820974689 1.150884278940819 1.2128599430934182 0.8917872386101346 0.7465937891216438 1.0 10.938073208496307 -8.760811816661008 24.999923284138358 0.9488995237452875 1.159552149494465 0.734103191277629 0.07179969444352695 4.935315576515338 196604.95075409795 0.008109101744934037 0.008927990487706287 1.734555431948322e-09 8.760811816661008 0.21065262574917742 KNT(ph)GSPDRKPSK ddPTM_A549_MK2206_60min_R1 1 KNTGSPDRKPSK 12 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KNT(0.556)GS(0.44)PDRKPS(0.003)K 44.806999999999995 0.013459 21976000.0 2999.3 2820.4 2524.5 2391.1 2834.0 2217.4 1949.3 1820.6 2732.9 4915.5 4161.0 True False 3505.5085141553036 2963.9463130975923 2882.512060622005 2976.9196073405587 2417.122354177098 2452.043796209005 2303.462577852106 2078.6756253536632 2113.902513544526 3805.085136036987 3127.708862242193 1.1207911824767072 0.9476413706142706 0.921604979101408 0.9517892292591656 0.7728092545174778 0.7839744375859788 0.7364696265881981 0.6646001008749586 0.6758629420607616 1.2165726746412058 1.0 11.610890512605504 -5.369924227504735 0.8341494651193956 0.8153485159921812 1.234194245156143 0.19688257816992139 0.15412568669550614 1.9750357128498544 1.0980933060537104 0.021463654761304837 0.7317736451735962 4.266539517401129e-06 5.369924227504735 0.4188457291639618 KNTFTAWS(ph)DEESDYEIDDR ddPTM_A549_PD325901_60min_R1 1 KNTFTAWSDEESDYEIDDR 19 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 KNTFT(0.001)AWS(0.998)DEES(0.001)DYEIDDR 78.645 0.00013679 4399700.0 3206.8 2578.0 2623.5 3008.3 3146.8 2559.2 2618.6 2044.7 2828.1 3092.4 3534.2 True False 3532.351975278613 2795.2571074917882 2801.5464863870907 3194.1158586549927 2925.779623870659 2538.358723700057 2718.2522559529034 2003.9168544638794 2709.2447919826695 2897.1453362477137 3099.515805139675 1.1396463826450571 0.9018367007055232 0.9038658495438268 1.0305209134144275 0.9439473155836394 0.818953308607397 0.8769925455600022 0.6465257738453687 0.874086458113925 0.9347090056594043 1.0 11.597827145296094 -7.002273610536915 24.659791636311212 0.900947801266433 0.9817362788980551 0.21349914259175218 0.10594316473168669 153.0505328816232 1660045.140865999 0.017153523974462376 0.032021694610586765 9.947784979520123e-08 7.002273610536915 0.08078847763162211 KNTFTAWS(ph)DEESDYEIDDRDVNK ddPTM_A549_PD325901_60min_R1 4 KNTFTAWSDEESDYEIDDRDVNK 23 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 KNTFT(0.002)AWS(0.996)DEES(0.001)DYEIDDRDVNK;KNTFT(0.001)AWS(0.999)DEESDYEIDDRDVNK;KNTFTAWS(0.997)DEES(0.002)DYEIDDRDVNK;KNT(0.001)FTAWS(0.999)DEESDYEIDDRDVNK 172.0 4.1476999999999993e-41 99489100.0 12539.5 11085.5 9637.5 10857.3 11173.5 11553.800000000001 9642.300000000001 8653.900000000001 13651.8 11584.5 12296.5 True False 13812.500808907991 12019.71398956563 10291.558704995452 11527.930762282644 10388.71190648239 11459.70968345018 10009.243002969019 8481.291175646778 13078.062321413323 10853.052692976858 10784.108453935836 1.280819909027055 1.1145765123661047 0.9543263357333336 1.0689739269151486 0.9633352586222238 1.0626478519202738 0.9281474723407461 0.7864619696541899 1.2127161347900086 1.0063931329451588 1.0 13.396619290192302 -5.337727809584846 3.4430667797717502 1.0485364812278237 1.2930389406440486 0.2963384182797857 0.10941111603553397 0.30139054200376925 5.841670742836043 0.017539860079789166 0.1672968594559577 4.594859015371432e-06 5.337727809584846 0.24450245941622484 KNTGS(ph)PDR ddPTM_A549_PD325901_60min_R1 1 KNTGSPDR 8 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KNT(0.201)GS(0.799)PDR 48.74100000000001 0.014571 5018100.0 1457.7 1516.8 1132.9 1209.4 1119.6 1335.3 914.36 1159.9 1461.6 1388.4 1259.5 True False 1605.684630897978 1644.6260592100627 1209.7854066811258 1284.1018912533152 1040.9631584103176 1324.4257595173042 949.15647015699 1136.764884576053 1400.1740348509147 1300.7361870541736 1104.5894846283243 1.4536483039563461 1.4889025127406963 1.0952353100556613 1.162515042124807 0.9423982148088113 1.1990207927454164 0.8592843616254098 1.029128830570531 1.2675967446150818 1.1775742981039234 1.0 10.109294583210517 -5.762836343042599 24.98660841448467 1.0978639233628147 1.4712755150769652 0.6284608214941927 0.11504760397080994 18.497026606529882 330878.1995892588 0.017876572635701315 0.06037176056175501 1.726488369061289e-06 5.762836343042599 0.3734115917141505 KNTGS(ph)PDRKPSK ddPTM_A549_MK2206_60min_R1 1 KNTGSPDRKPSK 12 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KNT(0.094)GS(0.899)PDRKPS(0.007)K 52.453 0.0043335 26292000.0 3545.7 2682.7 2139.5 2051.5 2199.4 1655.7 2100.9 1812.1 2331.8 3678.7 3489.0 True False 4144.127475957877 2819.2379712618445 2442.9132714203915 2554.117592095335 1875.8711735275617 1830.90507503529 2482.606335509919 2068.9707243235043 1803.6510231194413 2847.679115031891 2622.58500849868 1.58016897928133 1.0749843997910062 0.931490595539878 0.9738931564919836 0.7152756411893849 0.6981299249031422 0.9466256870472645 0.788905113702264 0.6877378682767488 1.0858290983147454 1.0 11.35677382175512 -4.627384727876765 1.0121465151769544 0.8361990584988914 3.364348633868183 0.7287630697890177 0.12638355892672185 2.1655948273334724 0.695009951458721 0.01944801017387834 8.107562665092306 2.3583880853932957e-05 4.627384727876765 2.5281495753692917 KNTGS(ph)PDRKPSK ddPTM_A549_PD325901_60min_R1 2 KNTGSPDRKPSK 12 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KNT(0.166)GS(0.833)PDRKPS(0.001)K;KNT(0.181)GS(0.819)PDRKPSK 71.08 0.00047139 85622000.0 10830.3 10464.6 7886.1 8960.9 10443.3 7954.200000000001 5826.0 6748.1 7853.6 11821.6 11453.6 True False 11929.784083154529 11346.488567516892 8421.298168971694 9514.394441319526 9709.798635429142 7889.423632406602 6047.711618109523 6613.503851717963 7523.540503629679 11075.182158513127 10044.879810352497 1.1876482654236842 1.1295793261580815 0.8383672406206891 0.9471884801960259 0.9666415943993664 0.7854174247337007 0.602069087165842 0.6583955185707573 0.7489925858421657 1.102569903036448 1.0 13.294172681495638 -5.721789687685058 4.5371533201328145 0.8468211420413051 1.172529841236544 0.41267209565131246 0.14236826049349516 0.14720253451666931 6.615529835151425 0.020464114532578886 0.08238799256279092 1.8976246462502115e-06 5.721789687685058 0.3257086991952388 KNYQSQADIPIRS(ph)PFGIVK ddPTM_A549_MK2206_60min_R1 1 KNYQSQADIPIRSPFGIVK 19 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4 Q14966-3 ZNF638 Zinc finger protein 638 1 KNYQSQADIPIRS(1)PFGIVK 83.60600000000001 2.7128000000000002e-05 3531400.0 1584.9 1592.6 1438.6 1007.5 1906.8 1368.8 1610.3 1283.7 2182.9 2120.1 2236.0 True False 1852.392372915261 1673.6565374554048 1642.6151120660793 1254.3375452283933 1626.3122459226852 1513.645507464097 1902.870665939181 1465.6684061663723 1688.476635375001 1641.167937526601 1680.7394895394245 1.1021293808137242 0.9957858120618319 0.977316902642781 0.7463009901505445 0.967617085244035 0.9005830569726683 1.1321627639394773 0.8720378234035612 1.0046034176526053 0.9764558682299614 1.0 10.714880412403936 KNYQSQADIPIRS(ph)PFGIVK ddPTM_A549_PD325901_60min_R1 2 KNYQSQADIPIRSPFGIVK 19 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4 Q14966-3 ZNF638 Zinc finger protein 638 1 KNYQSQADIPIRS(1)PFGIVK;KNYQSQADIPIRS(1)PFGIVK 90.475 1.0554999999999999e-06 14722800.0 5033.700000000001 4538.7 5047.2 5379.7 5401.9 5247.6 5562.0 5749.7 6556.4 5922.200000000001 6238.6 True False 5544.717518385914 4921.192177569037 5389.733343279179 5711.991850814837 5022.489179543313 5204.865285436236 5773.664953643183 5635.01772294761 6280.857308495164 5548.271281311022 5471.291749743753 1.0134201888695846 0.8994570939850759 0.9850933910683171 1.0439932856957148 0.9179713693349547 0.951304650438355 1.055265414042962 1.0299245554235936 1.1479660737867483 1.0140697179182365 1.0 12.417665772330333 -7.8191369452898 5.544250129279325 1.0674980699246517 0.9672961172864301 0.3442826043873407 0.05308709724037638 0.1672267261008939 10.49074942964135 0.009997561927926371 0.013996735278321237 1.5165720741373215e-08 7.8191369452898 -0.10020195263822163 KPAAAT(ph)VTK ddPTM_A549_PD325901_60min_R1 3 KPAAATVTK 9 1 P16403 P16403 HIST1H1C Histone H1.2 1 KPAAAT(0.94)VT(0.06)K;KPAAAT(0.823)VT(0.177)K;KPAAAT(0.583)VT(0.417)K 70.089 0.001292 64063000.0 3726.7 4026.0 4177.7 5097.8 5275.8 4444.1 5226.3 4439.6 5079.0 4659.7 4097.7 True False 4105.031840548463 4365.285149248227 4461.223844550921 5412.679528056186 4905.246008521932 4407.908723036661 5425.189706441096 4351.048695201177 4865.547292698271 4365.4857467706215 3593.7088774604867 1.1422828004502428 1.2147019411135436 1.2413982313735632 1.5061541467658017 1.3649536386453902 1.2265625495383847 1.5096352797154884 1.2107404477003347 1.353906913054275 1.214757760193284 1.0 11.811257827050424 -10.745774570857904 0.8246948645239519 0.9840669803644717 1.314228814007182 0.2013007461520513 0.12944421605208922 0.4617898147832418 0.5133790980925612 0.09918428610941321 0.021009247690661266 1.7956654606476294e-11 10.745774570857904 0.33016183364271035 KPAAATVT(ph)K ddPTM_A549_MK2206_60min_R1 2 KPAAATVTK 9 1 P16403 P16403 HIST1H1C Histone H1.2 1 KPAAAT(0.393)VT(0.607)K;KPAAAT(0.089)VT(0.911)K 65.295 0.0036344999999999997 91773000.0 10643.2 11611.0 12542.6 10899.3 15324.2 11873.3 11721.3 11449.0 18680.9 16937.0 15554.8 True False 12439.511958742954 12201.950305409204 14321.329281662718 13569.628989288167 13070.030479844985 13129.724725141323 13850.908487035276 13071.930811092001 14449.705977267335 13110.919936742634 11692.11386935949 1.063923264666632 1.0436051548715923 1.2248708353066409 1.1605796129687822 1.1178500847564 1.1229555982643358 1.1846368109134784 1.1180126157810075 1.2358506031261318 1.1213472673321534 1.0 13.51324816426451 -11.04409991327889 1.355079666525797 1.0003018587160608 1.1519478034157669 0.074806986282978 0.06686134659269063 0.3215956803629374 1.0562618491120916 0.044095466330817984 0.00994080469455558 9.034416050966745e-12 11.04409991327889 0.15164594469970605 KPAAATVT(ph)K ddPTM_A549_PD325901_60min_R1 1 KPAAATVTK 9 1 P16403 P16403 HIST1H1C Histone H1.2 1 KPAAAT(0.395)VT(0.605)K 66.498 0.0032981 62711000.0 5571.5 5959.7 7663.7 6758.1 7134.8 6298.2 6479.2 7416.9 7804.1 7611.9 6124.7 True False 6137.11457847848 6461.944834568971 8183.804767571844 7175.532488241304 6633.676261723776 6246.909547361558 6725.76950155428 7268.96411105451 7476.120816488794 7131.283334945016 5371.400727672167 1.142553849475713 1.2030278808428092 1.5235885726065543 1.335877334802947 1.2349993229044836 1.162994508151101 1.2521444298327493 1.353271610067473 1.3918382179109472 1.327639417816354 1.0 12.391082640908753 -10.881983860515799 1.103935794892087 0.99820091907936 1.2975404856166142 0.0 0.14150710978389142 0.3474712318018199 0.7445454139589407 0.08056140970090846 0.01891525239738639 1.3122486646009558e-11 10.881983860515799 0.29933956653725413 KPAGAT(ph)PK ddPTM_A549_MK2206_60min_R1 4 KPAGATPK 8 1 P16401 P16401 HIST1H1B Histone H1.5 1 KPAGAT(1)PK;KPAGAT(1)PK;KPAGAT(1)PK;KPAGAT(1)PK 71.555 0.0037488 547112000.0 56333.9 47221.9 38512.6 29260.4 63594.9 68572.4 58883.8 73508.5 65349.7 68369.4 68883.5 True False 65841.68508837845 49625.29300895731 43974.26578962605 36429.19931354928 54240.17445365465 75828.68585332476 69582.22425574706 83928.55498533984 50548.097292027 52924.705055389466 51777.82586211495 1.2716193465464491 0.9584275156919516 0.8492876063728537 0.7035675737054068 1.0475560445140544 1.4645011564459576 1.3438614522178947 1.620936251916848 0.9762498994576803 1.0221500067679294 1.0 15.660046767657366 -6.988205871624827 24.723201562708308 1.106745001815975 0.9317215445223419 0.13827179461719474 0.24481522021213403 431.51846377702617 904554.3637683273 0.04042855938404467 0.07636111049368569 1.0275290959170431e-07 6.988205871624827 -0.1750234572936331 KPAGAT(ph)PK ddPTM_A549_PD325901_60min_R1 7 KPAGATPK 8 1 P16401 P16401 HIST1H1B Histone H1.5 1 KPAGAT(1)PK;KPAGAT(1)PK;KPAGAT(1)PK;KPAGAT(1)PK;KPAGAT(1)PK;KPAGAT(1)PK;KPAGAT(1)PK 74.962 0.0021875 694176700.0 79254.8 79129.1 65212.4 63707.799999999996 72699.0 57177.5 46235.1 58103.5 64675.0 87489.2 95093.90000000001 True False 87300.68895170011 85797.58696060066 69638.10561801773 67642.88611508848 67592.87303793467 56711.865397139685 47994.6020313175 56944.58011118603 61956.93466337088 81965.1169809998 83397.95314989869 1.046796541814242 1.0287732938287932 0.8350097692787598 0.8110856868814009 0.8104859949793237 0.6800150753724893 0.5754889684768697 0.6828054881495038 0.742907137684903 0.9828192885462844 1.0 16.34772435534495 -5.764070401962435 4.636698389247439 0.8180102245226343 1.0433915510847742 0.3656189562246741 0.12142400832014603 0.19480528067339006 10.483079703752644 0.020675358365299223 0.07733025351943251 1.7215894715048359e-06 5.764070401962435 0.22538132656213994 KPALPVS(ph)PAAR ddPTM_A549_MK2206_60min_R1 3 KPALPVSPAAR 11 1 A0A087X0M4;Q9BWU0;A0A087WWF4 A0A087X0M4 SLC4A1AP Kanadaptin 1 KPALPVS(1)PAAR;KPALPVS(1)PAAR;KPALPVS(1)PAAR 114.31 9.6254e-06 231832700.0 10695.4 10818.0 10746.8 9943.4 13880.5 10259.4 10379.4 9846.8 14814.199999999999 13968.0 14140.8 True False 12500.522042575487 11368.589992586072 12270.857838420498 12379.533446376183 11838.696837387164 11345.042898361444 12265.202626870234 11242.61405456028 11458.807353416265 10812.619098802694 10629.249093774188 1.176049402200702 1.0695572088196648 1.1544425885745626 1.1646667922785985 1.1137848716257275 1.0673418976516895 1.1539105461414263 1.057705389663448 1.0780448602082315 1.0172514543041342 1.0 13.375752060430388 -9.862150432634396 0.24629901774316865 0.9579058176172629 1.1510516922159928 0.6296483564609783 0.03526350309138787 1.433392181054522 0.18714599313336225 0.09174023483085166 0.03315531430021761 1.373566111358002e-10 9.862150432634396 0.1931458745987299 KPALPVS(ph)PAAR ddPTM_A549_PD325901_60min_R1 4 KPALPVSPAAR 11 1 A0A087X0M4;Q9BWU0;A0A087WWF4 A0A087X0M4 SLC4A1AP Kanadaptin 1 KPALPVS(1)PAAR;KPALPVS(1)PAAR;KPALPVS(1)PAAR;KPALPVS(1)PAAR 115.68 8.5998e-06 416063000.0 28199.199999999997 29483.9 27382.699999999997 26545.7 32652.9 28954.3 28508.999999999996 28868.6 31335.7 29027.899999999998 32466.4 True False 31061.96202484616 31968.611726756044 29241.05468755167 28185.367599341123 30359.472950389663 28718.50578056756 29593.925595723398 28292.793126021395 30018.76950183209 27195.073440067576 28473.238621466477 1.0909177715185514 1.1227599414228329 1.0269662357799483 0.9898897689176699 1.0662458652491018 1.0086139536974263 1.039359308196575 0.9936626283422132 1.0542801225007263 0.9551099473301478 1.0 14.797318977912262 -5.7695884721086275 24.5785188639956 1.024150443308092 1.1068388591743945 0.5401270154925817 0.03179556959803723 61.607583906581304 185817.97001774298 0.0035160718447374366 0.011216994271050072 1.6998536334359203e-06 5.7695884721086275 0.0826884158663026 KPAPPQHFS(ph)PR ddPTM_A549_MK2206_60min_R1 3 KPAPPQHFSPR 11 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 KPAPPQHFS(1)PR;KPAPPQHFS(1)PR;KPAPPQHFS(1)PR 64.675 0.0025433000000000005 20331000.0 8228.099999999999 8407.5 7689.4 7839.6 9986.1 8026.9 7128.1 7592.900000000001 11552.800000000001 11787.5 12814.0 True False 9616.802122268944 8835.405838664023 8779.872544641248 9760.302351933018 8517.157918506682 8876.301230175006 8423.183502379103 8669.216827281023 8936.109246030657 9124.695563225707 9631.930151591318 0.9984293875594733 0.9173037698165099 0.911538228211788 1.0133277752559795 0.8842628408283816 0.9215495846082862 0.8745062899970766 0.9000498021519351 0.927758933608369 0.9473382198186093 1.0 13.233609214725005 -10.445656702749616 0.9050945225091316 0.9976657030780426 0.9262438573696181 0.1050856142566956 0.04332940074824233 0.5209071433279867 0.8017318083388586 0.02244900167920367 0.00748096385272084 3.5837961390514954e-11 10.445656702749616 -0.07142184570842447 KPAPPQHFS(ph)PR ddPTM_A549_PD325901_60min_R1 4 KPAPPQHFSPR 11 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 KPAPPQHFS(1)PR;KPAPPQHFS(1)PR;KPAPPQHFS(1)PR;KPAPPQHFS(1)PR 89.911 6.622e-05 97117000.0 17919.0 14389.1 12233.9 13218.099999999999 14115.2 13213.0 12914.2 14020.6 12377.699999999999 16807.5 26293.399999999998 True False 19738.123688729396 15601.719955550838 13064.166022417012 14034.552016516825 13123.797046796473 13105.397708756194 13405.6569479214 13740.948134052083 11857.508313611219 15746.2715816141 23059.478487595374 0.8559657452508014 0.6765859845418288 0.5665421284113062 0.6086239991969714 0.5691280942826307 0.568330186470007 0.5813512632184133 0.595891539413777 0.5142140712327841 0.6828546270066193 1.0 14.493072264964642 -10.815458117747134 0.9978424328976191 1.0061843508225994 0.6057168072281064 0.19830464687448524 0.12495491047113047 0.2323137408747368 0.4002266329660299 0.06736795774745118 0.015705899382896217 1.5294732378074122e-11 10.815458117747134 -0.400467543594493 KPAS(ph)PQVVK ddPTM_A549_PD325901_60min_R1 2 KPASPQVVK 9 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 KPAS(1)PQVVK;KPAS(1)PQVVK 84.289 0.00057097 36908000.0 8931.2 8852.900000000001 8191.0 9243.5 10195.599999999999 9820.8 9012.2 8889.2 9931.7 9892.7 10107.0 True False 9837.888849198063 9598.964952255254 8746.89051648433 9814.450001488363 9479.496228910537 9740.822660875858 9355.164202665072 8711.897932557502 9514.305187417092 9268.07323370126 8863.90307355178 1.1098822682924492 1.0829275627907935 0.9867989805284996 1.1072379650419277 1.069449445718283 1.0989315406596265 1.0554226648279945 0.9828512180545121 1.0733764921015425 1.0455973126957407 1.0 13.113726390319188 -14.999999999887923 0.2066397127920685 0.6944385713369157 1.0745595965626438 0.12251875748464003 0.04185666221244144 48.316741844835384 0.5777160709516901 6.010710828447207 0.03162919507889865 1.0000000002580678e-15 14.999999999887923 0.3801210252257281 KPAT(ph)PAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR ddPTM_A549_PD325901_60min_R1 1 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 2 KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR 201.88 1.7550999999999998e-88 515920000.0 4035.6 4089.5 3772.8 4778.7 4891.5 4242.3 4776.0 4539.9 4096.0 4957.3 4317.4 True False 4445.291141148298 4434.136517101496 4028.844895689428 5073.869445784867 4547.937914758903 4207.752115330081 4957.753293527483 4449.348133017349 3923.859364223689 4644.295231981888 3786.387170253533 1.1740191748142454 1.1710731939767771 1.0640340552970076 1.3400292198447117 1.2011285983874644 1.1112841677646859 1.3093624794834482 1.1750906425978156 1.0363069564174947 1.2265769513662572 1.0 11.886606223449627 -8.76825403018844 4.035888584387558 1.0157652004847493 1.1956569537117812 0.08443907247781868 0.09726199022273764 0.11313956125077687 4.0687718888229965 0.012517059831419975 0.013632907780206323 1.7050847486436655e-09 8.76825403018844 0.17989175322703188 KPAT(ph)PAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLREER ddPTM_A549_PD325901_60min_R1 3 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 35 3 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 2 KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER 381.73 0.0 3975150000.0 28154.4 30441.4 29340.4 30654.8 34643.6 27484.0 24870.0 37029.0 35036.0 36546.5 35288.9 True False 31012.613961826162 33006.80361210257 31331.615982158102 32548.277373897905 32210.353049931844 27260.179416291146 25816.441459386177 36290.42754631147 33563.55876097197 34238.94775293529 30948.58901476811 1.002068751729764 1.066504311274169 1.0123762336049382 1.0516885715974467 1.0407696788555254 0.8808213971655728 0.8341718405019057 1.172603621088972 1.084493989207587 1.1063169224482925 1.0 14.91758601620064 -11.488817446012456 2.501203191371265 0.9994881623814892 1.0296530522203615 0.0 0.09435232846976219 1.6839838272986183 19.124602439045134 0.07860715079924818 0.013437708007556825 3.2447598089739317e-12 11.488817446012456 0.030164889838872333 KPATAAGTK ddPTM_A549_MK2206_60min_R1 1 KPATAAGTK 9 1 P16402 P16402 HIST1H1D Histone H1.3 0 49.35 0.030724 2030400.0 2180.6 1787.3 1649.0 1662.1 2919.9 2557.5 1912.0 2308.3 3174.9 3028.6 3075.6 False True 2548.6319694485555 1878.2659358244664 1882.8529958271688 2069.3145746145055 2490.386577968142 2828.1329524688967 2259.385650671124 2635.5085938722737 2455.790219273487 2344.4371565459505 2311.843637758251 1.1024240254933129 0.8124537080050032 0.8144378646874811 0.8950927912326626 1.0772296782073982 1.223323630663569 0.9773090246111997 1.1400029616310356 1.0622648431599024 1.0140984962197983 1.0 11.174828108686116 -6.755288153144549 24.3826926385485 1.0522115154844838 0.8928654276826544 0.3874733423276123 0.09725290414418407 88.0739940636536 349109.130667991 0.013575931456631522 0.027695105147291493 1.7567576235354687e-07 6.755288153144549 -0.15934608780182935 KPATAAGTK ddPTM_A549_PD325901_60min_R1 1 KPATAAGTK 9 1 P16402 P16402 HIST1H1D Histone H1.3 0 49.5 0.030407 2445200.0 2107.1 2247.9 1300.0 1758.4 2739.1 2079.5 1685.6 1470.1 2322.0 2552.4 2414.6 False True 2321.011240834964 2437.3384220057355 1388.2258175350544 1867.0123743838508 2546.715065382014 2062.565241456027 1749.746430395712 1440.7777022288608 2224.4144149725107 2391.241028404692 2117.6195074105217 1.096047345952699 1.1509803406496637 0.65555960958851 0.8816562030385149 1.2026310942404386 0.9740018139416289 0.8262798979101519 0.6803761002327939 1.0504315847054981 1.129211843788104 1.0 11.04822767470758 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR ddPTM_A549_MK2206_60min_R1 3 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR 347.56 9.853099999999994e-287 600105000.0 27028.0 30541.5 26758.5 25507.0 43055.6 32793.5 29029.5 32913.2 45476.0 39564.2 41562.8 True False 31589.665628843253 32095.931896706188 30553.257664548964 31756.216145052753 36722.17827540841 36263.68640343646 34303.78438606561 37578.74689244765 35175.75861024947 30626.61974146974 31241.609685075677 1.011140781389822 1.0273456528086204 0.9779668196528445 1.0164718292419774 1.1754252948416688 1.160749614664057 1.0980159067300796 1.2028428519289538 1.1259265756416246 0.9803150365872563 1.0 14.931181168011692 -6.556589645597995 24.92670600959786 1.089468258266588 1.0059286114508135 0.32009167467338195 0.06599753908087296 209.2952178520138 154757.54028695895 0.010699451101819822 0.022272764667229716 2.7759417864488224e-07 6.556589645597995 -0.08353964681577453 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR ddPTM_A549_PD325901_60min_R1 6 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR 392.33 0.0 10357360200.0 59901.939999999995 63411.2 63075.16 68292.7 74563.2 63577.899999999994 62501.1 63455.840000000004 66824.2 68480.9 69220.7 True False 65983.14085132239 68755.08436562581 67355.81965934951 72510.98497502513 69326.13806107562 63060.142661585574 64879.613562414226 62190.16349105651 64015.81126141517 64157.004286976444 60706.99272617061 1.0869117030545519 1.1325727280835258 1.1095232465750624 1.1944420522047348 1.141979448294913 1.0387624197764045 1.0687337759434887 1.0244316296736358 1.0545047347373895 1.056830546299134 1.0 15.889575086974656 -7.288362828004868 5.763236426158409 1.0304013130307872 1.1353009480522283 0.6879086333273512 0.03062131512001425 0.07795954370990148 8.524642306234401 0.00497128785576407 0.008140901086920508 5.147983805048369e-08 7.288362828004868 0.10489963502144106 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLREER ddPTM_A549_MK2206_60min_R1 8 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 35 3 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER 376.05 0.0 4786348000.0 55236.59999999999 61737.5 61301.899999999994 53533.0 77125.7 59602.9 58546.6 53547.09999999999 85310.4 87319.2 89166.2 True False 64559.1876747877 64879.67504781686 69995.43120976204 66648.58740318759 65780.61169779715 65910.03931679712 69183.75938053468 61137.56540611613 65987.73061271493 67593.73207418199 67023.77167807247 0.9632282108037337 0.9680099078793402 1.0443373963787506 0.9944022208017931 0.9814519542969553 0.9833830246584031 1.0322271881808895 0.9121773346294375 0.9845421849678375 1.0085038544062714 1.0 16.03238525421694 -10.54587957104111 1.2809822050828108 0.9988144588721731 0.9858014892716659 0.042923839642948214 0.03307363249812221 1.5445774042104503 4.968093870241192 0.0137319863331658 0.005461519047880384 2.84524997998349e-11 10.54587957104111 -0.01301296960050724 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLREER ddPTM_A549_PD325901_60min_R1 17 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 35 3 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER 396.41 0.0 12567098400.0 80121.13 87485.92000000001 82605.93000000001 96142.53000000001 101315.27000000002 95980.32 93363.09999999999 100641.59 111694.37000000001 100419.29000000001 105728.70000000001 True False 88254.96813554139 94858.66551026287 88212.0651596106 102081.03572257193 94199.23495390695 95198.68809609368 96916.08386074858 98634.21453564995 107000.24405653463 94078.7988917367 92724.74016945026 0.9517952595419458 1.0230135488857985 0.95133256775276 1.1009039824325575 1.0159018486518498 1.0266805592781645 1.0452019998507283 1.0637313661424168 1.153955717330634 1.0146029928993272 1.0 16.50066669960563 -5.994338008884085 0.6431404379101826 1.069946527054319 0.9456785532262495 0.2300660763333272 0.04980187894951067 1.7866953443174787 0.8398439884080289 0.010970560152360193 0.13571153685759263 1.013122571372452e-06 5.994338008884085 -0.12426797382806942 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR ddPTM_A549_MK2206_60min_R1 2 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 0 ; 276.29 1.2864999999999996e-183 30830000.0 3114.3700000000003 2999.0 3087.0 2682.42 5217.6 3596.2 3193.3999999999996 3700.0 4739.8 4376.4 5051.3 False True 3639.9995169639124 3151.6362902353135 3524.783018871115 3339.613020418409 4450.097951712925 3976.747497035637 3773.599443960861 4224.486330774773 3666.242867905282 3387.7682004581948 3796.9228012122076 0.9586709310502189 0.8300501367131089 0.9283262271610555 0.8795577880467316 1.1720275035068357 1.0473606405076286 0.9938573001157938 1.1126079069677322 0.9655826730885324 0.8922404741483325 1.0 11.89061495113541 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR ddPTM_A549_PD325901_60min_R1 2 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 0 ; 228.16 2.1769e-115 39573000.0 4615.6 4511.7 4465.1 3688.8 5305.3 5015.6 4661.1 4616.1 4699.700000000001 4274.1 4307.2 False True 5084.172314174868 4891.916792812527 4768.128536827521 3916.648798127363 4932.674030291406 4974.754616516881 4838.480711151791 4524.028264239603 4502.187952646988 4004.2325965775294 3777.4417055904064 1.3459300527789937 1.2950343576640133 1.2622639628749142 1.0368522146432961 1.3058239980226085 1.316963967744232 1.2808882540771191 1.197643436176471 1.1918616628772847 1.060038223925861 1.0 11.88319377619923 -10.209746480209095 0.4456199028811646 0.9653860949523464 1.2652333466490329 0.5382111668005546 0.07964826829183537 0.7566899831614874 0.2558568913058668 0.09838652900739972 0.024236344220334074 6.169550448208758e-11 10.209746480209095 0.29984725169668647 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER ddPTM_A549_PD325901_60min_R1 2 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 35 3 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 0 ; 362.77 0.0 233050000.0 12670.1 13989.7 12900.2 13000.8 16396.3 14296.8 15731.2 14271.5 16096.2 15523.4 16378.3 False True 13956.359224765356 15168.661115856426 13775.685147204405 13803.82988904093 15244.680452164259 14180.371600888939 16329.859424442953 13986.84373672483 15419.732690043307 14543.249874759984 14363.87293059791 0.9716292598937945 1.0560286344182395 0.9590508920375822 0.9610103038182706 1.0613210326923774 0.987224801375256 1.1368702231873062 0.9737515643799707 1.0735080130927783 1.0124880625879087 1.0 13.810157174979674 -6.764465889086943 24.999861600932856 1.0365094936323607 0.989874057578963 0.17871165539288547 0.049384189357823766 109.25614198319411 902494.9193461513 0.006942128678740071 0.013544749450896884 1.7200224321362747e-07 6.764465889086943 -0.046635436053397705 KPATSYVR ddPTM_A549_MK2206_60min_R1 2 KPATSYVR 8 1 P46779;H0YKD8;P46779-2;P46779-3 P46779 RPL28 60S ribosomal protein L28 0 ; 53.327 0.025528 13901800.0 5264.200000000001 5354.5 5052.6 4277.1 6651.0 5652.9 4344.5 4499.5 6930.5 7143.0 7149.5 False True 6152.668262666739 5627.021179081354 5769.134655376801 5324.989692006312 5672.646710526423 6251.086125908673 5133.83941388112 5137.317904140836 5360.752815734323 5529.391338971048 5374.081833838152 1.144878037384206 1.0470665228152198 1.07351075658193 0.9908650178114652 1.0555564440437701 1.1631914658516034 0.9552960994296115 0.9559433709761318 0.9975197589995928 1.0288997283508008 1.0 12.391802574821053 -7.789831344598589 24.999954429913426 0.991932214560355 1.0723729698724558 0.47231292900978483 0.047838156361799465 154.8014942358715 136306.68261227288 0.007152442326686567 0.009883566080024105 1.62244003893652e-08 7.789831344598589 0.08044075531210082 KPATSYVR ddPTM_A549_PD325901_60min_R1 2 KPATSYVR 8 1 P46779;H0YKD8;P46779-2;P46779-3 P46779 RPL28 60S ribosomal protein L28 0 ; 66.27 0.0086461 22739000.0 9109.8 9251.2 6917.0 7288.9 9766.5 9160.3 7377.9 7498.5 10467.3 9435.8 7833.3 False True 10034.620189719686 10030.831091089218 7386.42921529998 7739.118798707038 9080.5347325959 9085.701553887786 7658.670021841787 7348.936535040545 10027.395782016261 8840.021977676295 6869.853759379955 1.4606744977676744 1.4601229432858496 1.0751945345582798 1.1265332669040018 1.3217944734554978 1.3225465740784306 1.1148228608774677 1.0697369685644997 1.4596228876524577 1.2867845935739628 1.0 12.746063672953948 -11.089539898115857 1.4185421690161273 1.000025853993364 1.2825871820517976 0.0 0.16877396998553262 0.4326247261423323 1.5554798981487408 0.11524809582669597 0.025249592061605475 8.136921044222055e-12 11.089539898115857 0.2825613280584336 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDIT(ph)TPPNK ddPTM_A549_MK2206_60min_R1 1 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITTPPNK 40 3 P27816;P27816-6 P27816 MAP4 Microtubule-associated protein 4 1 KPCNSQPSELS(0.001)S(0.004)ET(0.004)S(0.004)GIARPEEGRPVVS(0.022)GT(0.022)GNDIT(0.498)T(0.444)PPNK 72.389 9.8382e-06 46149000.0 827.4 731.86 408.69 871.4 1026.2 1129.6 743.71 679.02 1169.6 933.76 920.07 True False 967.0448920121687 769.1085479731966 466.6483874254731 1084.893039118633 875.2473393989195 1249.133522232205 878.8324802618323 775.2731644115364 904.687467467407 722.8229674755152 691.5912263598115 1.3982897051806265 1.1120854612650268 0.6747459621222722 1.5686911542081938 1.2655558746830573 1.8061731766133238 1.2707397762802237 1.1209991319470385 1.308124558244076 1.0451592500386273 1.0 9.43377575660414 -10.725774254212373 0.7787976861379926 0.9829033006198143 1.2795798843676263 0.11989730076015215 0.2690948177776149 1.3459367668797684 1.3108643673024507 0.25122683153344555 0.051660274351193254 1.880293937521077e-11 10.725774254212373 0.2966765837478119 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITT(ph)PPNK ddPTM_A549_MK2206_60min_R1 1 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITTPPNK 40 3 P27816;P27816-6 P27816 MAP4 Microtubule-associated protein 4 1 KPCNS(0.003)QPS(0.003)ELS(0.003)S(0.003)ET(0.003)S(0.003)GIARPEEGRPVVS(0.039)GT(0.039)GNDIT(0.158)T(0.748)PPNK 42.36 0.01595 3900200.0 505.38 532.48 421.85 192.07 507.13 324.44 342.48 509.91 295.35 630.85 340.52 True False 590.6757886452862 559.5809575940312 481.67467331090995 239.12715862234998 432.531848791049 358.77202545415804 404.7041828670749 582.1913040338824 228.45369657703364 488.3405468556471 255.95948612610232 2.3076925086272473 2.186209099194492 1.8818395074977046 0.9342383134201964 1.689844964675213 1.4016750497670696 1.5811259390780745 2.274544744737677 0.8925385030054422 1.907882197478154 1.0 7.999771664881049 -2.000000000034195 0.15907093060006547 0.779379557936642 6.531673949227442 0.009466452252868907 0.502684340171421 37.43761731750312 0.364384173094168 0.6503947568427939 50.86367855662881 0.009999999999212634 2.000000000034195 5.7522943912908 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITT(ph)PPNK ddPTM_A549_PD325901_60min_R1 1 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITTPPNK 40 3 P27816;P27816-6 P27816 MAP4 Microtubule-associated protein 4 1 KPCNSQPSELS(0.007)S(0.007)ET(0.007)S(0.007)GIARPEEGRPVVS(0.069)GT(0.069)GNDIT(0.371)T(0.461)PPNK 74.367 1.8317e-06 80484000.0 1281.9 1362.3 1574.6 1018.5 1378.3 1252.0 1061.3 1093.9 1049.1 1033.0 1535.2 True False 1412.0375443150965 1477.1058019922652 1681.461824838997 1081.4104318186724 1281.4929628768673 1241.804127099277 1101.6883522656444 1072.0813063520511 1005.0099753435237 967.7762037071174 1346.3801324346184 1.0487658799315107 1.0970941760119852 1.2488759929920092 0.8031984472789201 0.9518062039132904 0.9223280239985123 0.8182595135843952 0.7962694045502877 0.7464533612258483 0.7187986367246202 1.0 10.394870077784292 -6.268655184722993 24.975273772824856 0.8714358630682574 1.1281302349514633 0.6360728208885851 0.0950944309947532 312.27782359745527 1080853.9674452224 0.015140841119859855 0.03586932194538594 5.386973204034669e-07 6.268655184722993 0.2566943718832059 KPDAEVLTVES(ph)PEEEAMTK ddPTM_A549_PD325901_60min_R1 3 KPDAEVLTVESPEEEAMTK 19 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 KPDAEVLT(0.005)VES(0.995)PEEEAMTK;KPDAEVLTVES(0.999)PEEEAMTK;KPDAEVLT(0.017)VES(0.983)PEEEAMTK 112.86 6.5304e-11 49860000.0 9063.0 10509.5 11626.3 10918.5 13162.0 13779.6 11274.8 11655.7 11112.8 11244.7 12791.8 True False 9983.069088172037 11395.172448093463 12415.330632621386 11592.910947287359 12237.546526434984 13667.383506211816 11703.86868380729 11423.21791978023 10645.767661802976 10534.707722967487 11218.489693901223 0.8898763880488471 1.015749246022688 1.106684676046082 1.0333753708032272 1.0908372570942197 1.2182908643791774 1.0432659834924067 1.0182491789416452 0.9489483836304989 0.9390486607742338 1.0 13.45359084357263 -8.431096969030301 3.1391594775501823 0.9761177685280366 1.0636623248685917 0.21927911088933594 0.07576557346612182 0.30777593919400303 5.850516963843251 0.013065728724258745 0.015765759439253506 3.7059796563645997e-09 8.431096969030301 0.08754455634055514 KPDAKPENFITQIETT(ph)PTETASR ddPTM_A549_PD325901_60min_R1 2 KPDAKPENFITQIETTPTETASR 23 2 Q96IY1 Q96IY1 NSL1 Kinetochore-associated protein NSL1 homolog 1 KPDAKPENFITQIET(0.154)T(0.817)PT(0.021)ET(0.006)AS(0.002)R;KPDAKPENFITQIET(0.131)T(0.843)PT(0.019)ET(0.003)AS(0.004)R 139.93 1.1925000000000001e-23 29490000.0 4957.5 5491.4 5759.6 6628.3 6587.0 6582.299999999999 5817.1 6106.3 8006.4 5731.4 5515.5 True False 5460.78175048139 5954.179550069975 6150.481091288387 7037.715037038491 6124.351843916364 6528.69593115461 6038.47292373926 5984.5050562003225 7669.918851005991 5369.518425873155 4837.128465635185 1.1289304779223617 1.230932689171013 1.2715149359757059 1.4549365573060786 1.2661131262950955 1.3497048874217354 1.2483590143695555 1.2372020091499616 1.5856347222315956 1.1100632253247504 1.0 12.239935138400726 -2.1001908175074733 18.739554292105417 1.2818127840101823 0.006406871701688743 0.0 0.15527948096593824 0.0 0.0 0.026853359508329375 0.0 0.007939793045703162 2.1001908175074733 -1.2754059123084935 KPDGVKES(ph)TESSNTTIEDEDVK ddPTM_A549_MK2206_60min_R1 4 KPDGVKESTESSNTTIEDEDVK 22 2 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 KPDGVKES(0.846)T(0.149)ES(0.005)S(0.001)NTTIEDEDVK;KPDGVKES(0.708)T(0.133)ES(0.133)S(0.025)NT(0.001)TIEDEDVK;KPDGVKES(0.803)T(0.144)ES(0.026)S(0.026)NTTIEDEDVK;KPDGVKES(0.866)T(0.13)ES(0.003)S(0.001)NTTIEDEDVK 170.46 1.3886000000000001e-40 196456200.0 6527.8 7320.2 7303.700000000001 5731.1 9191.4 6174.200000000001 6319.9 6911.5 9973.099999999999 9395.6 8277.6 True False 7629.533050612804 7692.766912897813 8339.474484913819 7135.219757278854 7839.357235773953 6827.549745897733 7468.144023889354 7891.2262905810385 7714.208773768119 7273.127434472402 6222.043469862049 1.2262101811998367 1.2363730581696453 1.340311189612874 1.1467646910279543 1.259932894031639 1.0973163043570169 1.200271913891809 1.2682692316124236 1.2398191705239168 1.1689290616019525 1.0 12.603172758855393 -10.709365000832559 0.7459550182216249 0.9835637193478252 1.2251434869920077 0.22404241882002718 0.07782305725376373 0.3902395197397915 0.34436900730650966 0.05779387235601824 0.011648752642274125 1.952697630050401e-11 10.709365000832559 0.24157976764418254 KPDGVKES(ph)TESSNTTIEDEDVK ddPTM_A549_PD325901_60min_R1 7 KPDGVKESTESSNTTIEDEDVK 22 2 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 KPDGVKES(0.832)T(0.16)ES(0.006)S(0.002)NTTIEDEDVK;KPDGVKES(0.665)T(0.127)ES(0.176)S(0.024)NT(0.006)T(0.001)IEDEDVK;KPDGVKES(0.857)T(0.139)ES(0.004)S(0.001)NTTIEDEDVK;KPDGVKES(0.867)T(0.13)ES(0.001)S(0.002)NTTIEDEDVK;KPDGVKES(0.879)T(0.118)ES(0.002)SNTTIEDEDVK;KPDGVKES(0.862)T(0.134)ES(0.003)SNTTIEDEDVK;KPDGVKES(0.858)T(0.14)ES(0.001)S(0.001)NTTIEDEDVK 236.77 1.7354999999999998e-98 446748800.0 21001.4 20201.06 19475.04 18788.819999999996 27396.1 22392.099999999995 24127.63 25724.8 23033.99 23676.4 25988.72 True False 23133.446667586464 21903.47422182625 20796.73332732916 19949.362738893775 25471.892447414164 22209.74616167709 25045.820162795742 25211.698683284812 22065.951503157914 22181.468063360287 22792.272196069724 1.014968866139444 0.9610044155932493 0.9124466901950796 0.8752687124513115 1.1175670520382128 0.9744419499126075 1.0988733351084943 1.1061511755564368 0.9681330283061004 0.9732012619253133 1.0 14.476257135771686 -6.7362274703148355 24.999513641448665 1.0095569961500128 0.9403227048233268 0.2872949355673613 0.06349303863763071 297.6984814024281 295189.06916148734 0.009465832943731696 0.019698596954010886 1.8355766719774695e-07 6.7362274703148355 -0.06923429132668601 KPDGVKES(ph)TESSNTTIEDEDVKAR ddPTM_A549_PD325901_60min_R1 2 KPDGVKESTESSNTTIEDEDVKAR 24 3 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 KPDGVKES(0.738)T(0.242)ES(0.014)S(0.004)NT(0.001)T(0.001)IEDEDVKAR;KPDGVKES(0.763)T(0.235)ES(0.001)SNTTIEDEDVKAR 75.26100000000001 5.5478e-06 20497500.0 3536.5 3305.2 3055.8999999999996 3149.5 3756.8 4594.2 4050.8 4313.6 4285.2 4596.7 4660.9 True False 3895.522876566303 3583.74080360041 3263.2917506195186 3344.037461966527 3492.9353282564166 4556.786358402157 4204.955410682816 4227.561864046266 4105.107946184411 4306.46357752227 4087.6388478794415 0.9530007472620035 0.876726378471415 0.7983317196215678 0.8180853510826489 0.8545117262667319 1.11477225067623 1.02870032484994 1.0342307677791576 1.004273640347173 1.0535332835865254 1.0 11.997052021204292 -7.23466295479547 24.042131033997016 1.014020136318353 0.8552839164201003 0.7539989736762087 0.049785045320300834 193.0502906323833 173336.72837207635 0.0072788350923334395 0.012604521244158019 5.825551490227039e-08 7.23466295479547 -0.1587362198982527 KPDGVKESTESSNTT(ph)IEDEDVK ddPTM_A549_MK2206_60min_R1 1 KPDGVKESTESSNTTIEDEDVK 22 2 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 KPDGVKESTES(0.002)S(0.012)NT(0.088)T(0.898)IEDEDVK 138.62 6.486799999999999e-23 7026600.0 1051.7 1236.6 1442.7 897.61 1463.7 981.28 1304.6 1127.2 1945.0 1488.6 1847.3 True False 1229.2012484036727 1299.5376580543477 1647.296553717316 1117.5244902952445 1248.3916689516655 1085.1183982790535 1541.628932984074 1286.9840519052227 1504.4606055267668 1152.3242261223995 1388.5644271136746 0.8852317000218272 0.9358857483880806 1.186330660321936 0.8048056456538898 0.8990520314182484 0.7814678073920012 1.110232195843131 0.9268450399384054 1.0834647468637797 0.829867310166995 1.0 10.439378402057255 -7.785034040276995 24.999560626664568 1.0350100388921992 0.9229269444081475 0.027462116343996756 0.12377359846852098 282.0075264091528 298798.1134917792 0.016594468910249748 0.022935381204723212 1.640461187771746e-08 7.785034040276995 -0.11208309448405174 KPDGVKESTESSNTT(ph)IEDEDVK ddPTM_A549_PD325901_60min_R1 1 KPDGVKESTESSNTTIEDEDVK 22 2 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 KPDGVKESTESS(0.001)NT(0.12)T(0.878)IEDEDVK 137.16 1.1392e-22 10927000.0 2901.8 2951.3 3210.6 3520.2 3660.8 4519.7 3926.7 4354.2 4700.0 4232.6 4921.7 True False 3196.3885998077467 3200.016408588251 3428.490622906189 3737.6347590457435 3403.6780370743954 4482.893061701759 4076.132717272687 4267.35206519618 4502.475344690271 3965.3529136599677 4316.362101226853 0.7405283720054967 0.7413688503285442 0.7943009744089121 0.8659224299053557 0.7885524794379409 1.038581323014483 0.944344478447282 0.9886455225763513 1.0431180793220565 0.9186793926609825 1.0 12.075600182790017 -6.982065797372117 0.8285787675531118 1.0197994287352472 0.7411166607589773 0.754622692644451 0.054895478235955183 0.1630635808555362 0.21186797027507956 0.0076242618051340855 0.0240445623856062 1.0421595260450469e-07 6.982065797372117 -0.2786827679762699 KPDS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 KPDSPPK 7 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KPDS(1)PPK;KPDS(1)PPK 62.262 0.011465000000000001 16857900.0 6162.6 5555.9 4326.2 3453.2 4663.299999999999 3800.0 2980.2 2982.1000000000004 4638.8 8041.3 7699.9 True False 7202.696218895571 5838.671578832403 4939.720212581863 4299.234155020041 3977.334747436155 4202.113477764148 3521.6637636663627 3404.8218072982295 3588.1192066414233 6224.764745074603 5787.802323570937 1.2444613371749846 1.0087890450325678 0.8534707884657285 0.7428094317442955 0.6871925689718845 0.7260291977580091 0.6084630342892533 0.5882754138703091 0.6199450164406511 1.0754971225821117 1.0 12.498799933609474 -5.476798336854244 1.5743019111934535 0.7649549665844573 1.3165726254801704 0.5080527033423231 0.1471012297117069 0.5029896133736913 1.5718982685854808 0.023798889724297504 0.3734904692063554 3.335812741206419e-06 5.476798336854244 0.5516176588957131 KPDS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 KPDSPPK 7 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KPDS(1)PPK 47.097 0.025224 17745000.0 8026.9 7475.3 6921.9 6228.2 7212.9 5776.8 4960.6 6083.5 6517.8 8968.9 9690.5 True False 8841.784978908532 8105.269765567631 7391.661758766076 6612.90176873152 6706.290787154149 5729.755656091936 5149.378347544479 5962.159820086573 6243.879532260046 8402.60212335795 8498.629933140746 1.040377690106218 0.9537148727891784 0.8697474554036052 0.7781138631468404 0.789102577699342 0.6741975708047394 0.6059068800565457 0.7015436449158579 0.7346924835392337 0.9887007893580197 1.0 13.053014567326754 -5.663230906688534 1.9685706293685081 0.8151396122816236 1.0397253892410994 0.31640022875316076 0.11683905178709651 0.5049488996369726 3.371458485684666 0.02055766811893758 0.15308000641827355 2.1715462991479222e-06 5.663230906688534 0.2245857769594758 KPDS(ph)PPKVLEPENK ddPTM_A549_MK2206_60min_R1 4 KPDSPPKVLEPENK 14 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KPDS(1)PPKVLEPENK;KPDS(1)PPKVLEPENK;KPDS(1)PPKVLEPENK;KPDS(1)PPKVLEPENK 62.765 0.0012173 39570500.0 5258.120000000001 6330.42 6487.8 5874.500000000001 7630.1 6612.200000000001 5443.15 5529.7 8103.8 8556.1 8549.699999999999 True False 6145.562107308469 6652.611338590009 7407.867596317463 7313.7527637163275 6507.722397532352 7311.898615176872 6432.099897725177 6313.551908996014 6268.302239109415 6623.271067530472 6426.573530284085 0.956273522484198 1.0351723678630238 1.1526931982352966 1.1380485618427252 1.0126270814246296 1.137760049071383 1.0008599244084035 0.9824133932716281 0.9753723674943039 1.030606906825151 1.0 12.649834022454634 -7.913408334275432 8.72042244745101 0.9877914232283438 1.0742858518382397 0.2913505639203484 0.056945474203754204 0.231012837995081 20.97753205196429 0.008583493314868915 0.011870989378500339 1.2206514341730965e-08 7.913408334275432 0.08649442860989587 KPDS(ph)PPKVLEPENK ddPTM_A549_PD325901_60min_R1 2 KPDSPPKVLEPENK 14 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KPDS(1)PPKVLEPENK;KPDS(1)PPKVLEPENK 73.11 0.00022756 47823000.0 4392.3 4785.299999999999 4662.8 4911.1 5958.9 4659.2 5012.6 4983.0 5057.9 5101.5 5986.9 True False 4838.203062559641 5188.574025011809 4979.2456476941925 5214.447493082649 5540.367421089 4621.257019952839 5203.35723599997 4883.610155912124 4845.334052321042 4779.390419372562 5250.549254085996 0.921466084485263 0.9881964293495661 0.9483285284523949 0.9931241934402858 1.055197685609266 0.8801473515092846 0.9910119844987072 0.9301141498885439 0.9228242261607937 0.9102648481305501 1.0 12.358252634050038 -7.258282742540479 24.998821337449453 0.9569954731173225 0.9804771007704484 0.11148937100956646 0.04602836356313943 766.3283639124835 6068881.54229084 0.006919507746388937 0.011682992180347868 5.517181324439215e-08 7.258282742540479 0.02348162765312589 KPEDVLDDDDAGS(ph)APLK ddPTM_A549_MK2206_60min_R1 2 KPEDVLDDDDAGSAPLK 17 1 A0A087WUV8;P35613-3;P35613-4;P35613-2;P35613 A0A087WUV8 BSG Basigin 1 KPEDVLDDDDAGS(1)APLK;KPEDVLDDDDAGS(1)APLK 183.15 1.4402999999999999e-39 102263000.0 14075.1 14612.2 15430.3 14162.8 18721.1 15441.6 15746.8 15847.6 21278.3 22034.0 21889.0 True False 16450.632776843704 15355.898566247573 17618.548563682187 17632.686635792248 15967.250989691205 17075.619862695483 18607.789730119275 18094.04583123953 16458.79902446283 17056.504096722405 16453.357194332944 0.9998344157087784 0.9332988024800574 1.0708178492442 1.0716771311489854 0.9704555004246082 1.0378197993888363 1.1309418199787449 1.0997175602236176 1.000330742842668 1.0366579838549426 1.0 14.00609436554339 -3.8376008075521186 16.081277346708017 1.0185936833801552 0.4636834696049633 0.0 0.05726178890550111 0.0 0.0 0.007785294530314267 0.0 0.00014534469752929663 3.8376008075521186 -0.5549102137751919 KPEDVLDDDDAGS(ph)APLK ddPTM_A549_PD325901_60min_R1 2 KPEDVLDDDDAGSAPLK 17 1 A0A087WUV8;P35613-3;P35613-4;P35613-2;P35613 A0A087WUV8 BSG Basigin 1 KPEDVLDDDDAGS(1)APLK;KPEDVLDDDDAGS(1)APLK 210.31 2.5993e-55 170230000.0 24659.0 24676.0 25774.0 24051.0 30196.0 23792.0 25376.0 25186.0 26791.0 27341.0 27389.0 True False 27162.36352700365 26755.53312042954 27523.178631652714 25536.575646215875 28075.1371305448 23598.24584021247 26341.69756628003 24683.645471965225 25665.06743821214 25614.68459395575 24020.326633175984 1.1308074174764968 1.1138704951445493 1.1458286580349295 1.0631235801325742 1.1688074670795052 0.9824281826217737 1.0966419386611443 1.0276148967047387 1.068472874251614 1.066375365544684 1.0 14.551968148780308 -2.0000000005361187 0.07162994915665204 0.9147237761400956 1.4921223653274958 0.3274157913565877 0.04657024718487739 117.01260481767282 0.6003267429028413 0.8121078572211468 6.77968007987291 0.009999999987655411 2.0000000005361187 0.5773985891874002 KPEEES(ph)PR ddPTM_A549_MK2206_60min_R1 5 KPEEESPR 8 1 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR 60.434 0.009087 63197000.0 13856.82 15090.5 12745.890000000001 9148.82 5096.7300000000005 4407.08 4658.820000000001 4088.3400000000006 5622.570000000001 16852.3 17595.6 True False 16195.512449277325 15858.541993263081 14553.44886051154 11390.281310706137 4347.007768597407 4873.4342804170565 5505.267289257143 4667.874715016146 4349.066872399297 13045.353725569346 13226.126906144846 1.2245090769356601 1.199031440254457 1.1003560576566087 0.8611955254575868 0.3286682336745001 0.36847024945397006 0.4162418316657313 0.3529283174235578 0.3288239182385831 0.9863321150735737 1.0 13.691103029120809 -6.402804633345387 2.9184119001775297 0.5858487440430953 1.1855806905599686 0.5774823756667791 0.2359303336275968 0.1954042546375474 3.1770940596726733 0.04273941017205616 0.1096741488042008 3.9554451509835077e-07 6.402804633345387 0.5997319465168733 KPEEES(ph)PR ddPTM_A549_PD325901_60min_R1 4 KPEEESPR 8 1 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR 110.39 0.0012847000000000002 415700000.0 24827.0 24365.5 22604.1 22869.9 25715.7 20900.0 20226.5 20153.4 22593.0 27419.1 26352.600000000002 True False 27347.418763328602 26418.866195729697 24138.150155495492 24282.521781688614 23909.517946348875 20729.79732937291 20996.230525865496 19751.424626963555 21643.494779273868 25687.853346627115 23111.397262895087 1.1832871224637884 1.143109864592423 1.0444262577861891 1.0506730296516407 1.0345336404534553 0.8969512787811496 0.9084794955073767 0.8546183686900704 0.9364857750951342 1.1114798925579665 1.0 14.496316864076423 -6.0487289461293585 0.8997740008288079 0.9523214610808697 1.1993996952444579 0.5643380112616282 0.06718076735155998 0.40580181600249043 0.4625730982877891 0.008822454459762437 0.07497731936992351 8.938631916842615e-07 6.0487289461293585 0.2470782341635882 KPEEES(ph)PRK ddPTM_A549_MK2206_60min_R1 3 KPEEESPRK 9 2 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK 60.49 0.0016562 18999000.0 7250.0 7300.3 5518.9 3816.2 2903.8199999999997 2163.3599999999997 1613.59 1925.3400000000001 2700.19 9677.400000000001 9640.1 True False 8473.622754518043 7671.854087897582 6301.563007077352 4751.16917131573 2476.6719246670946 2392.285319277855 1906.7584163527308 2198.2628411064584 2088.6012763173885 7491.268618753803 7246.1971167750435 1.1693889384959584 1.0587421186952168 0.8696372601414816 0.6556776050594469 0.341789201253381 0.33014356092241576 0.2631391867519805 0.3033677949523965 0.2882341237284656 1.0338207059550473 1.0 12.823008336316638 -6.033424118163683 1.9305134753461495 0.5534092088195248 1.1356849338538586 0.4448923071829858 0.26105708190991855 0.3234365427286016 2.286785321301272 0.04620899203131502 0.19409914799392314 9.25925152691026e-07 6.033424118163683 0.5822757250343338 KPEEES(ph)PRK ddPTM_A549_PD325901_60min_R1 4 KPEEESPRK 9 2 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK 74.76 0.00043689 54952600.0 9082.300000000001 8982.2 8313.5 8091.400000000001 8691.9 7276.0 5271.799999999999 6453.400000000001 7961.2 9769.9 10749.2 True False 10004.328409964126 9739.161517033648 8877.70410313668 8591.1874010973 8081.410929427158 7216.746668350108 5472.421233839653 6324.681874405635 7626.618449818757 9153.026846658437 9427.116544792996 1.0612288882213883 1.033100786519183 0.9417199905139839 0.9113271656583671 0.8572516199442629 0.7655306512929693 0.5804978869028947 0.6709031170192788 0.8090086097462397 0.9709253941189524 1.0 13.202600848493466 -5.9968767188167345 1.4488622399212832 0.8511633045624407 1.0645071844958702 0.35028364151881763 0.1178811529291625 0.5847908386148246 2.144239343735017 0.02143889305362204 0.12025504008022585 1.0072175425005935e-06 5.9968767188167345 0.21334387993342951 KPEEES(ph)PRKDDAK ddPTM_A549_MK2206_60min_R1 4 KPEEESPRKDDAK 13 3 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK 114.52 5.8492e-06 3798440000.0 36492.5 36414.0 36631.5 30858.199999999997 23000.8 16269.8 14982.4 15881.699999999999 20961.0 48995.2 48726.399999999994 True False 42651.541844034415 38267.31706323066 41826.39752373734 38418.46038527723 19617.412788975525 17991.45943698083 17704.508144673153 18132.979610666414 16213.366967838847 37927.150291355756 36626.29009977362 1.164506198357721 1.044804618731155 1.141977454167433 1.04893125349637 0.5356101514932514 0.49121708444863843 0.48338251284649164 0.495080980390599 0.4426701946517662 1.0355171159306187 1.0 15.160591956497743 -6.688382015591977 6.287547589964379 0.662815847055913 1.1051010343341345 0.5621217225764276 0.194741120800646 0.1563815523455375 10.453452041446456 0.03417984071962331 0.0714353701744237 2.049358721858506e-07 6.688382015591977 0.4422851872782215 KPEEES(ph)PRKDDAK ddPTM_A549_PD325901_60min_R1 7 KPEEESPRKDDAK 13 3 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK 132.59 9.9367e-09 9824458900.0 31350.800000000003 31425.8 31247.500000000004 31387.0 37117.9 34103.5 32349.1 34156.700000000004 35109.799999999996 37619.4 36780.200000000004 True False 34533.51013676087 34074.16245485471 33368.14325648204 33325.70370495107 34510.86675380345 33825.772402979404 33580.162702606736 33475.41782308723 33634.257203618385 35244.104663833044 32256.468568897708 1.0705917810872432 1.0563512984093262 1.0344636203808197 1.0331479291903745 1.0698898014855684 1.0486508258252067 1.0410365484021198 1.037789296481291 1.0427135609026081 1.092621301322987 1.0 14.977300880751748 -13.963126414933964 0.19280325437917323 0.8579868591677393 1.0578570940620955 0.0 0.03040315275817332 12.788271378598864 0.21001618618883897 0.7026637555592681 0.011723006277400234 1.0886131724448739e-14 13.963126414933964 0.19987023489435618 KPEEMPTACPGHS(ph)PR ddPTM_A549_MK2206_60min_R1 1 KPEEMPTACPGHSPR 15 1 C9J8F8;C9J6I8;Q9NZC9 C9J8F8 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 1 KPEEMPT(0.032)ACPGHS(0.968)PR 45.236999999999995 0.01006 10661000.0 627.36 939.44 924.22 656.38 1424.3 1093.3 715.25 707.82 1353.6 1187.1 1616.3 True False 733.2430305206124 987.2534833273301 1055.2882933919866 817.1931294660181 1214.7873567588008 1208.992280326196 845.2016666540384 808.1556526078375 1047.0117612550293 918.9332855232436 1214.9281023893436 0.6035279199473423 0.812602393002305 0.8686014351932425 0.6726267405115428 0.9998841531196241 0.9951142606286957 0.6956803986934033 0.6651880477688142 0.8617890714651502 0.7563684498827704 1.0 10.246655224505103 -14.999999999872964 0.1424136042499552 1.7261517709205731 0.7355760610162939 0.0 0.14546113575160313 66.52714716809362 0.633293116386982 13.443937490290988 0.2892849164215725 1.0000000002925115e-15 14.999999999872964 -0.9905757099042792 KPEEMPTACPGHS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KPEEMPTACPGHSPR 15 1 C9J8F8;C9J6I8;Q9NZC9 C9J8F8 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 1 KPEEMPTACPGHS(1)PR;KPEEMPT(0.012)ACPGHS(0.988)PR 75.358 0.0001491 16321300.0 5177.0 5624.2 5475.299999999999 5996.0 6613.7 5696.1 5588.8 6204.299999999999 6149.0 6186.8 6632.8 True False 5702.565228894028 6098.171072131616 5846.886783653607 6366.359302095982 6149.176528026369 5649.712850135937 5801.484842308706 6080.550369320805 5890.578913723501 5796.164392154105 5817.007648783443 0.9803262387125536 1.0483347178350324 1.005136512907356 1.094438874156789 1.0571030501072824 0.9712404024975807 0.9973314791019772 1.0453055482215978 1.01264761358109 0.9964168421484375 1.0 12.506061485828926 -7.2409429080590595 24.97110579981198 1.006498463987652 1.0391071258823519 0.21006723491631718 0.03175851519760711 1019.9711167919485 1242644.6085107008 0.004512243062966946 0.007810451731954654 5.741919399742763e-08 7.2409429080590595 0.03260866189469991 KPEKPLFSSAS(ph)PQDSSPR ddPTM_A549_MK2206_60min_R1 2 KPEKPLFSSASPQDSSPR 18 2 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 KPEKPLFS(0.003)S(0.065)AS(0.878)PQDS(0.044)S(0.01)PR;KPEKPLFS(0.082)S(0.236)AS(0.679)PQDS(0.002)S(0.001)PR 123.29 5.8953e-11 12817300.0 5187.0 4972.5 4913.9 4761.4 6409.0 5082.0 5128.4 5519.4 7302.1 6890.0 6142.6 True False 6062.438790025525 5225.579010735275 5610.76490976053 5927.943213747368 5466.244589950966 5619.7738668414195 6060.1638969151645 6301.791852453587 5648.186009057585 5333.544214687177 4617.222892864431 1.3130054430325566 1.131758013850926 1.215181731519079 1.2838763367712995 1.183881462252696 1.2171328950842628 1.312512745763409 1.3648446260180618 1.2232864083270552 1.1551411613525886 1.0 12.172809663717842 -10.33214512136768 0.8365702468439472 1.0072560529815615 1.2466947105730857 0.3786451636676432 0.07663680796592694 0.2757828977660109 0.3661632922759397 0.03740250821200493 0.013060473838458127 4.654305419193349e-11 10.33214512136768 0.23943865759152416 KPEKPLFSSASPQDS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 KPEKPLFSSASPQDSSPR 18 2 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 KPEKPLFSSAS(0.005)PQDS(0.498)S(0.498)PR;KPEKPLFSSASPQDS(0.582)S(0.417)PR 98.70299999999999 1.8796e-07 70011000.0 2865.9 3284.2 3443.3 3097.3 4515.0 3883.8 3931.7 2879.1000000000004 4813.2 4660.6 4335.5 True False 3349.5938554721724 3451.351752047621 3931.611716514062 3856.1386390430816 3850.8494809843355 4294.78113814221 4646.038997250871 3287.2212418739605 3723.017885100992 3607.767223072724 3258.875696287198 1.0278372566613476 1.059062104142146 1.2064319363249434 1.1832726984451536 1.1816496975848347 1.3178720326875946 1.4256570149466128 1.0086979523702166 1.1424240235190886 1.1070588630253724 1.0 11.670158608886423 -9.941807849059536 0.7230418352468955 1.0104667240383938 1.183208609341575 0.12328212046206366 0.11877809996533739 0.7076747990794282 0.7535825063335779 0.05889109708791845 0.026110656623906072 1.1433841062067751e-10 9.941807849059536 0.17274188530318124 KPEKPLFSSASPQDS(ph)SPR ddPTM_A549_PD325901_60min_R1 4 KPEKPLFSSASPQDSSPR 18 2 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 KPEKPLFSSASPQDS(0.576)S(0.424)PR;KPEKPLFS(0.002)S(0.02)AS(0.224)PQDS(0.378)S(0.378)PR;KPEKPLFSSASPQDS(0.619)S(0.381)PR;KPEKPLFSSAS(0.02)PQDS(0.49)S(0.49)PR 138.44 7.0499e-14 140283000.0 10487.4 9873.8 11264.300000000001 10380.1 13476.8 11553.199999999999 11854.6 11741.4 11383.5 11485.0 12047.400000000001 True False 11552.073127584174 10705.899778104116 12028.763135738554 11021.255202082473 12530.23606043603 11459.11456965125 12305.733290086033 11507.208566049885 10905.091082187584 10759.83513995764 10565.646174760835 1.0933617250196879 1.0132744936772837 1.1384787013285382 1.0431217381110105 1.1859412905921642 1.084563535453679 1.1646929195378424 1.089115457371481 1.0321272264670014 1.018379279599641 1.0 13.367093381996522 -8.820254915358053 2.8222479752934437 1.0132466702739635 1.1029684230768757 0.39862312476765605 0.04698148080827391 0.17760574888748457 2.7518033643063893 0.008220225313454909 0.008760959026374415 1.512673102692748e-09 8.820254915358053 0.08972175280291217 KPEKPLFSSASPQDSSPR ddPTM_A549_MK2206_60min_R1 2 KPEKPLFSSASPQDSSPR 18 2 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 0 ; 94.057 1.2243e-06 9019100.0 2394.55 2775.1 2802.3 2745.3 3882.2 3052.2 2788.4 2829.6 4156.2 3799.6000000000004 3877.7 False True 2798.6914988732665 2916.3407365895355 3199.7082778692966 3417.8986232411994 3311.1335227192426 3375.181778113615 3295.0161863657763 3230.704465286567 3214.8273360875805 2941.2677210631955 2914.760070924428 0.9601790304426842 1.0005422970078652 1.0977604331098498 1.1726174848268727 1.1359883634158277 1.1579621292956586 1.1304588049062811 1.108394648847353 1.1029475009474743 1.0090942820313715 1.0 11.509161417235859 -4.072134100980016 12.793981813886612 1.072771893426836 1.0890786326338646 0.0 0.07045272393699915 0.0 0.0 0.010277802654570546 0.0 8.469658485617944e-05 4.072134100980016 0.01630673920702863 KPENEVAQNGGAETSHTEPVS(ph)PIPK ddPTM_A549_MK2206_60min_R1 1 KPENEVAQNGGAETSHTEPVSPIPK 25 1 O95104-2;O95104-3;O95104 O95104-2 SCAF4 Splicing factor, arginine/serine-rich 15 1 KPENEVAQNGGAETSHT(0.003)EPVS(0.997)PIPK 140.55 2.9594e-27 15170000.0 2989.7 3295.4 3058.9 2797.4 4163.4 3666.6 3039.4 3217.9 5196.0 4198.3 4751.2 True False 3494.2882688527716 3463.1217842085534 3492.6980163345806 3482.76312558006 3550.969375222628 4054.5971783078985 3591.6196373691523 3674.047179405445 4019.11429630698 3249.9011141540163 3571.3459135508556 0.9784233601103433 0.9696965424346983 0.9779780790995745 0.975196245304975 0.9942944372173773 1.1353134858551308 1.00567677405355 1.028757019997673 1.1253780489470775 0.9099933730369908 1.0 11.802252161961933 -7.02364825988507 23.400693493048447 1.0586017756295139 0.9763154773920292 0.111652545932037 0.06000486209821322 273.8720077198405 271005.28070859704 0.00751221103824436 0.013072937640069424 9.470038401964339e-08 7.02364825988507 -0.08228629823748468 KPES(ph)PYGNLCDAPDSPRPVK ddPTM_A549_PD325901_60min_R1 1 KPESPYGNLCDAPDSPRPVK 20 2 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 KPES(0.664)PY(0.018)GNLCDAPDS(0.318)PRPVK 47.09 0.021654 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KPESTDDEEKIGNEES(ph)DLEEACILPHSPINVDK ddPTM_A549_PD325901_60min_R1 1 KPESTDDEEKIGNEESDLEEACILPHSPINVDK 33 2 O95714;Q9BVR0 O95714 HERC2;HERC2P3 E3 ubiquitin-protein ligase HERC2;Putative HERC2-like protein 3 1 KPESTDDEEKIGNEES(0.999)DLEEACILPHSPINVDK 171.61 4.2687999999999995e-63 14591000.0 1770.6 2047.7 1920.3 2151.3 2056.0 1959.4 1754.3 2380.6 1442.4 1808.5 2477.5 True False 1950.3500085531718 2220.2668654037743 2050.623105701975 2284.1809150432105 1911.5936528149473 1943.4432960370004 1821.0608464897946 2333.1170654554276 1381.780944081115 1694.3110013594594 2172.7832061664735 0.8976275235458262 1.0218538412403684 0.9437771333477718 1.0512695921804736 0.8797903294676356 0.8944487837173104 0.838123583301605 1.0737919267941312 0.6359497533668097 0.7797883362458414 1.0 11.085328518550126 -7.315074681986927 1.1319258546258173 0.8434302555811105 0.9770694818682418 0.13905011524238953 0.11435001847552485 0.7621463927087734 1.927613624008415 0.02466718020665703 0.05168479045636928 4.8408911567293184e-08 7.315074681986927 0.13363922628713132 KPESTDDEEKIGNEESDLEEACILPHS(ph)PINVDK ddPTM_A549_MK2206_60min_R1 2 KPESTDDEEKIGNEESDLEEACILPHSPINVDK 33 2 O95714;Q9BVR0 O95714 HERC2;HERC2P3 E3 ubiquitin-protein ligase HERC2;Putative HERC2-like protein 3 1 KPESTDDEEKIGNEESDLEEACILPHS(1)PINVDK;KPESTDDEEKIGNEESDLEEACILPHS(1)PINVDK 118.33 1.4655999999999998e-21 7235100.0 1793.53 2083.73 1953.37 1662.92 2253.1 1817.56 1810.0 1865.92 2867.9 2741.7 2910.3 True False 2096.2340164014818 2189.7829566695664 2230.387238604557 2070.3354746513164 1921.6719746635213 2009.8929928013163 2138.85357098051 2130.419874140341 2218.3252290952246 2122.3480658066533 2187.592189806165 0.9582380235994633 1.0010014512181977 1.01956262643367 0.9463991891627487 0.8784415960242543 0.9187695047400063 0.9777204274851733 0.9738651856903503 1.014048797318015 0.9701753716695739 1.0 11.095128101137863 -8.481250422066083 2.2444208457518156 1.0065737516048527 0.955966128165763 0.14008752913860223 0.03753532116777662 0.3269170654294612 3.2507967905137907 0.006998632695799074 0.008334915044148022 3.3017909888584685e-09 8.481250422066083 -0.050607623439089755 KPESTDDEEKIGNEESDLEEACILPHS(ph)PINVDK ddPTM_A549_PD325901_60min_R1 2 KPESTDDEEKIGNEESDLEEACILPHSPINVDK 33 2 O95714;Q9BVR0 O95714 HERC2;HERC2P3 E3 ubiquitin-protein ligase HERC2;Putative HERC2-like protein 3 1 KPESTDDEEKIGNEESDLEEACILPHS(1)PINVDK;KPESTDDEEKIGNEESDLEEACILPHS(1)PINVDK 122.41 7.8424e-22 12410500.0 2693.65 3843.6000000000004 4332.0599999999995 3970.3 4380.650000000001 3424.8199999999997 3492.6499999999996 4008.8 3953.03 4436.2 4396.8 True False 2967.1073650396756 4167.513661115374 4626.059642393006 4215.536413794475 4072.9682564220807 3396.92940141545 3625.564707001414 3928.841339157237 3786.8978961321213 4156.09757491337 3856.0214736116036 0.7694737659903749 1.0807807191000993 1.1996975831309813 1.0932346831165711 1.0562618191561266 0.8809415156689566 0.9402345738509748 1.0188847147361526 0.9820738608556709 1.0778201323191055 1.0 11.912897370407013 KPESTS(ph)FSAPR ddPTM_A549_PD325901_60min_R1 1 KPESTSFSAPR 11 1 Q9BT25-3;Q9BT25;Q9BT25-2 Q9BT25-3 HAUS8 HAUS augmin-like complex subunit 8 1 KPES(0.203)T(0.203)S(0.582)FS(0.011)APR 46.41 0.014449000000000002 6367300.0 2426.9 2198.8 2502.7 2152.0 2852.3 2446.3 2273.7 2491.0 2277.8 2427.3 2971.1 True False 2673.277101410648 2384.1005926892726 2672.5482719576785 2284.924152453393 2651.9642879008143 2426.378143868181 2360.22689771638 2441.3150508483036 2182.071987262871 2274.0398637543913 2605.6735353546737 1.0259447567543307 0.9149651943503193 1.0256650480943317 0.876903465246416 1.0177653692675048 0.9311903854977412 0.905802997072354 0.9369228407640874 0.8374310740220402 0.8727263154418377 1.0 11.347440624735176 -7.499069949419864 23.561743465883573 0.9212141928233215 0.967511054178646 0.19711833598246964 0.057489001792493624 716.9035555881362 709464.3431314094 0.010164934733252976 0.01618309136395244 3.1690569993818517e-08 7.499069949419864 0.046296861355324515 KPFKLS(ph)GLSFK ddPTM_A549_PD325901_60min_R1 2 KPFKLSGLSFK 11 2 P49006 P49006 MARCKSL1 MARCKS-related protein 1 KPFKLS(0.994)GLS(0.006)FK;KPFKLS(0.932)GLS(0.068)FK 50.155 0.005552399999999999 7327200.0 2988.5 3088.7 2713.8 3001.3 3028.0 2216.59 2685.6000000000004 2859.7 2648.9 3003.1000000000004 2925.8 True False 3291.8903199825772 3348.9955887935907 2897.9747874051013 3186.6834845531453 2815.323726032909 2198.538825948071 2787.8019776167084 2802.6610401087482 2537.575944797882 2813.483753487748 2565.9451481743135 1.2829153118587817 1.3051703740340757 1.1293985724780706 1.2419141098244018 1.0971878054509583 0.8568144285985012 1.0864620311935536 1.0922529041990081 0.9889439556427712 1.0964707314533046 1.0 11.325274615143183 -6.912679258407172 3.8862445389180498 1.00091466631332 1.2363210934074922 0.634457332638162 0.07685522902790684 0.09195151193505173 2.686000601881546 0.010107477712683648 0.019704544079505427 1.2227023350325533e-07 6.912679258407172 0.23540642709417225 KPFSVSSTPTMS(ph)R ddPTM_A549_PD325901_60min_R1 2 KPFSVSSTPTMSR 13 1 A0A2R8Y7M0;P82094;P82094-2 A0A2R8Y7M0 TMF1 TATA element modulatory factor 1 KPFSVS(0.014)S(0.212)T(0.045)PT(0.157)MS(0.572)R;KPFSVSS(0.002)T(0.015)PT(0.219)MS(0.764)R 57.93600000000001 0.0052378 11716800.0 5646.9 5715.1 6561.0 6879.9 7059.3 7379.3 6584.0 7842.9 7554.6 7050.1 7515.9 True False 6220.169130971934 6196.731534145198 7006.2689144980695 7304.855797613429 6563.479121262917 7319.2054273991225 6834.557722903044 7686.46720686397 7237.106433829167 6604.9554828224045 6591.491947215574 0.943666347586073 0.9401106128579685 1.0629261130263095 1.1082249445361454 0.995750153959531 1.1104019372262077 1.036875684235668 1.1661194868198153 1.0979466396657465 1.0020425627027456 1.0 12.686389332784056 -5.7612067441389545 24.9968673504894 1.0603551152832003 0.9418884384026477 0.45580992422117006 0.05150158086128507 4.198005054058909 450779.16618300683 0.007498707995772526 0.02584711695316379 1.7329788237699997e-06 5.7612067441389545 -0.11846667688055257 KPGAAS(ph)PLASR ddPTM_A549_PD325901_60min_R1 2 KPGAASPLASR 11 1 A0A087WYB5;Q9UN70-2;Q9UN70 A0A087WYB5 PCDHGC3 Protocadherin gamma-C3 1 KPGAAS(0.985)PLAS(0.015)R;KPGAAS(0.997)PLAS(0.003)R 55.975 0.0067021 15718400.0 4753.5 5411.6 4665.299999999999 5448.1 5955.5 5045.9 4421.8 5083.4 5449.1 5554.0 6671.9 True False 5236.07182065825 5867.654524011856 4981.915312727919 5784.6167634671665 5537.206225359639 5004.80786336281 4590.0740187018055 4982.007599149847 5220.0932767556915 5203.319492148431 5851.298596658767 0.8948563697720321 1.0027952645182778 0.8514204548666706 0.988603925762791 0.9463209121683719 0.8553328429044241 0.7844539024760844 0.851436226822315 0.8921256009283975 0.8892589236720294 1.0 12.514541126631782 -10.548791540318163 0.9834018632411103 0.9965413288439765 0.897510611084856 0.0 0.06850390482995662 0.5648327014927561 1.0225627004342144 0.035995795508476904 0.011557852601868528 2.8262362319175453e-11 10.548791540318163 -0.09903071775912053 KPGDASSLPDAGLS(ph)PGSQVDSK ddPTM_A549_PD325901_60min_R1 1 KPGDASSLPDAGLSPGSQVDSK 22 1 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 KPGDASSLPDAGLS(1)PGSQVDSK 159.56 4.2466000000000005e-33 8085100.0 3416.8 3275.7 3483.8 3414.2 4258.2 3621.5 3381.4 3480.7 2843.3 3419.3 3226.0 True False 3763.6710206847815 3551.7547350701475 3720.231617791252 3625.0873797892095 3959.1187219925127 3592.007704704498 3510.0810273730785 3411.274707943673 2723.8059888420953 3203.404814458612 2829.2224512989064 1.3302845871864428 1.2553819277941627 1.3149307563579102 1.2813016446002394 1.3993663595362984 1.2696095010328345 1.2406521890004045 1.2057286999039416 0.9627401293919415 1.132256254006438 1.0 11.466189899631917 -8.587244834465253 2.3559730217733876 0.9810075946704284 1.3008208240965362 0.763539300485491 0.06283329556069099 0.05464171815249294 0.605081802548543 0.007790338002651601 0.008944957139194723 2.586754215665287e-09 8.587244834465253 0.3198132294261078 KPGDGEVS(ph)PSTEDAPFQHSPLGK ddPTM_A549_MK2206_60min_R1 4 KPGDGEVSPSTEDAPFQHSPLGK 23 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KPGDGEVS(0.639)PS(0.07)T(0.291)EDAPFQHSPLGK;KPGDGEVS(0.949)PS(0.025)T(0.025)EDAPFQHSPLGK;KPGDGEVS(0.946)PS(0.043)T(0.012)EDAPFQHSPLGK;KPGDGEVS(0.972)PS(0.024)T(0.004)EDAPFQHSPLGK 184.3 2.7601e-50 67515400.0 9047.5 9522.5 8891.300000000001 8389.6 11743.4 9041.1 8506.7 8986.7 14506.100000000002 13909.9 14705.2 True False 10574.496809862341 10007.154576113966 10152.220037476103 10445.052376623458 10015.961416387918 9997.823201003543 10052.257277491659 10260.592245614505 11220.491511481665 10767.643929154887 11053.49299712663 0.9566656271109228 0.9053386634175585 0.9184626108792203 0.9449549006217911 0.9061354106789211 0.9044944619408987 0.909419066000653 0.9282669512960074 1.0151082118926973 0.974139480791633 1.0 13.432214725031603 -8.731509914806137 6.487132450522513 1.007176175486822 0.9200421849476584 0.7480817827852223 0.01902622148936463 0.04308332849573766 5.622811390162904 0.0027297305696656693 0.0030592345868337826 1.8556244456287777e-09 8.731509914806137 -0.0871339905391636 KPGDGEVS(ph)PSTEDAPFQHSPLGK ddPTM_A549_PD325901_60min_R1 2 KPGDGEVSPSTEDAPFQHSPLGK 23 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KPGDGEVS(0.984)PS(0.01)T(0.006)EDAPFQHSPLGK;KPGDGEVS(0.965)PS(0.015)T(0.02)EDAPFQHSPLGK 171.25 4.826600000000001e-41 52777700.0 5619.8 5185.9 6652.1 6177.9 8161.8 6460.299999999999 6944.700000000001 7962.9 7439.900000000001 8344.5 8033.8 True False 6190.317958921903 5622.933992917629 7103.551508326878 6559.494851971106 7588.54332468143 6407.689458705639 7208.98435878566 7804.0737127258 7127.226875949175 7817.626845918718 7045.693530454169 0.878595972442598 0.7980667862735114 1.008211821536464 0.9309934960438561 1.0770470347426917 0.9094476549411589 1.02317597659133 1.1076374070194257 1.011572082314195 1.109561012287571 1.0 12.782526007336315 -5.769649898451148 24.998633631071822 1.007102330600379 0.8383313730034696 0.5413917395842776 0.06353154884108647 74.89524756474955 228037.14067992836 0.007064126626100253 0.02251000184038434 1.6996132241929544e-06 5.769649898451148 -0.1687709575969094 KPGDGEVSPSTEDAPFQHS(ph)PLGK ddPTM_A549_MK2206_60min_R1 1 KPGDGEVSPSTEDAPFQHSPLGK 23 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KPGDGEVSPSTEDAPFQHS(1)PLGK 130.46 1.2255e-22 11796000.0 2461.1 2139.3 1947.8 1785.3 2879.0 2414.1 1537.8 1969.6 3158.7 2889.6 2919.7 True False 2876.4735118819794 2248.181232310907 2224.027328849094 2222.698580145163 2455.50291378824 2669.558459650113 1817.19835439438 2248.7968316470233 2443.2594934074023 2236.837353085642 2194.6579103793624 1.3106705597615258 1.0243880021931495 1.0133822307024856 1.0127767838592 1.118854515856546 1.2163893274777666 0.828009844176701 1.024668501187186 1.1132757783581257 1.019219142312247 1.0 11.099780363620212 KPGDGEVSPSTEDAPFQHS(ph)PLGK ddPTM_A549_PD325901_60min_R1 4 KPGDGEVSPSTEDAPFQHSPLGK 23 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KPGDGEVSPSTEDAPFQHS(1)PLGK;KPGDGEVSPSTEDAPFQHS(1)PLGK;KPGDGEVSPSTEDAPFQHS(1)PLGK;KPGDGEVSPSTEDAPFQHS(1)PLGK 153.81 1.8006e-29 39118200.0 9814.3 9653.1 10361.3 10227.7 11661.3 11452.4 11093.400000000001 12667.3 11055.7 11951.699999999999 12432.8 True False 10810.640511094203 10466.6006145574 11064.480125558439 10859.441800207986 10842.250517301034 11359.135451431122 11515.565407541413 12414.64076419539 10591.06737623239 11197.067622310116 10903.644418012716 0.9914703833550486 0.9599176397633322 1.0147506376198423 0.9959460693956868 0.9943694146325737 1.041774200987877 1.0561207763266574 1.138577184678411 0.9713327920650133 1.0269105624732835 1.0 13.41252279941578 -5.770828450971836 24.85364542728583 1.007256546718021 0.975694010061825 0.03565618616809996 0.046124043445378786 401.6004676510242 1063082.9100641962 0.007050325969006146 0.02236474429267267 1.695007206643755e-06 5.770828450971836 -0.031562536656196016 KPGIVS(ph)PFKR ddPTM_A549_MK2206_60min_R1 1 KPGIVSPFKR 10 2 Q9BSQ5-3;Q9BSQ5;A0A3B3IRS0;E9PEC4 Q9BSQ5-3 CCM2 Cerebral cavernous malformations 2 protein 1 KPGIVS(1)PFKR 43.382 0.013958000000000002 4479000.0 1696.2 1506.8 1370.8 1122.5 2050.6 1679.2 1228.9 1220.8 1878.6 2009.4 2043.0 True False 1982.4770918915176 1583.4896839368357 1565.2000525651197 1397.5125503909403 1748.9594564133943 1856.8918294372527 1452.1752228607454 1393.8521385432014 1453.1000995077543 1555.4751444110905 1535.6667160684458 1.2909553037438868 1.0311415018428116 1.0192316055219872 0.9100363612547373 1.1388925983178253 1.2091763206219608 0.9456317621954768 0.9076527634275277 0.9462340261094704 1.012898911030225 1.0 10.584649428293973 -7.805443194340871 24.99967321888945 0.9659026517815932 1.086254994858788 0.3220861444800506 0.09813135208766552 139.67940157018776 79354.85076874372 0.015302308560175205 0.021143236382592984 1.565153027639673e-08 7.805443194340871 0.12035234307719489 KPGLTPS(ph)PSATTPLTK ddPTM_A549_MK2206_60min_R1 1 KPGLTPSPSATTPLTK 16 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 KPGLT(0.012)PS(0.831)PS(0.157)AT(0.001)TPLTK 107.45 3.0065000000000004e-07 4669900.0 2755.3 3048.8 3067.1 3017.7 3809.7 2765.2 3123.0 3072.4 4620.8 3315.5 4149.4 True False 3220.3272793825577 3203.9708975223157 3502.060899637058 3757.0366354697 3249.298176679075 3057.8116286087957 3690.4086752332223 3507.9221088303834 3574.196177901328 2566.5262472852464 3118.9894623859054 1.032490592936833 1.0272464643312398 1.1228190867173107 1.2045685568285676 1.0417791454138126 0.980385366954619 1.1832065224132573 1.1246982880624932 1.1459468590724917 0.8228710863684527 1.0 11.606862963187144 -10.969271716405128 1.260675233723791 1.0004641358851933 1.1011129096251724 0.3152865210008752 0.08637914505107959 0.5587858465013481 1.5911920706855898 0.047636809811237864 0.011231212859418126 1.0733176808671497e-11 10.969271716405128 0.10064877373997905 KPGLTPS(ph)PSATTPLTK ddPTM_A549_PD325901_60min_R1 2 KPGLTPSPSATTPLTK 16 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 KPGLT(0.101)PS(0.845)PS(0.054)ATTPLTK;KPGLT(0.169)PS(0.795)PS(0.036)ATTPLTK 111.57 1.574e-07 22651000.0 7745.4 8159.6 8322.4 8174.0 10711.4 9365.2 7853.0 9618.7 9453.9 8343.9 9377.599999999999 True False 8531.707306137887 8847.238128118695 8887.208110656724 8678.889415499092 9959.068216323942 9288.932916222164 8151.85021232649 9426.847482775824 9056.585459822834 7817.064730021119 8224.21464950422 1.0373886954242133 1.0757547687124185 1.0806148051099895 1.0552848855935784 1.2109445875083409 1.129461390794576 0.9912010519834751 1.146230720442602 1.1012097623654304 0.9504937630114452 1.0 13.005662203587608 -10.663764528053623 0.8512428818715708 0.9977776844175184 1.0934682990136608 0.3590044381552323 0.057630802892944206 0.6803991866910116 0.8471306289557194 0.04175928679421282 0.010177215959763659 2.168879740081161e-11 10.663764528053623 0.09569061459614248 KPGLTPSPS(ph)ATTPLTK ddPTM_A549_MK2206_60min_R1 1 KPGLTPSPSATTPLTK 16 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 KPGLT(0.005)PS(0.415)PS(0.503)AT(0.077)T(0.001)PLTK 65.097 0.0012125999999999999 5890300.0 2203.6 2569.0 3296.2 2598.7 3547.9 2831.7 2360.7 2475.9 3719.0 3438.1 3591.7 True False 2575.513807152546 2699.7511269138117 3763.65072458794 3235.381616660074 3026.0086098747092 3131.3486144696662 2789.608632604251 2826.8664071257454 2876.6524380226465 2661.4308221358474 2699.7817641228767 0.9539711103239104 0.9999886519682917 1.3940573918242982 1.198386350946854 1.1208345245112135 1.1598524947763695 1.0332718998531933 1.0470721910532486 1.0655129522875464 0.9857947992327858 1.0 11.398627076922404 -7.76616148076875 24.087359487257032 1.0333485696397222 1.1452063008600784 0.2069060893204867 0.10779565063017467 95.4495418829267 486887.59741374786 0.017082641758567493 0.024034554953605708 1.7133201368637123e-08 7.76616148076875 0.11185773122035614 KPGMFFNPEESELDLTYGNR ddPTM_A549_MK2206_60min_R1 1 KPGMFFNPEESELDLTYGNR 20 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 104.06 1.0246e-09 8825900.0 2263.2 2719.4 2670.9 2460.4 3734.5 2657.8 2197.0 2697.5 3362.0 3391.1 3962.1 False True 2645.172830072445 2857.8058445034712 3049.6737820223066 3063.198110451554 3185.1599970622356 2939.0466318951458 2596.1664615713707 3079.8788857472846 2600.5123680107918 2625.048154778765 2978.201221602929 0.8881780085526789 0.9595744652086811 1.0239985666183125 1.0285396729516074 1.069491199573116 0.9868529401493197 0.8717229859217037 1.0341406293862276 0.8731822246084309 0.8814206829738356 1.0 11.540225517293102 -7.546095787545318 24.64451354336404 0.9419040690135144 0.9988901521186371 0.17248233962790416 0.06430465345254875 308.60400889541376 327576.9071712984 0.010547981361089647 0.015645716204570784 2.8438338052057462e-08 7.546095787545318 0.056986083105122654 KPGMFFNPEESELDLTYGNR ddPTM_A549_PD325901_60min_R1 2 KPGMFFNPEESELDLTYGNR 20 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 194.92 1.2116999999999998e-54 20950700.0 8409.1 7913.700000000001 8698.3 8575.6 9811.900000000001 9840.3 9369.2 9619.8 8703.2 9493.9 9116.0 False True 9262.785641547773 8580.615272132562 9288.61894512705 9105.295335399322 9122.745993217397 9760.163859341063 9725.75003302296 9427.925542412893 8337.43477019327 8894.453533760887 7994.78979108519 1.1586027755071806 1.073275907979546 1.1618340429018634 1.1389036576737055 1.14108641147638 1.2208155704386876 1.2165110387102265 1.179258715835876 1.0428585351287354 1.112531256754104 1.0 12.964844385741571 -8.846397527909703 4.356636363281604 1.0184551842947183 1.1607930438521923 0.4811531552756153 0.0476741440575793 0.08639465469071816 2.9584250077657654 0.007587783719997877 0.008053783567156232 1.4243032723668336e-09 8.846397527909703 0.14233785955747402 KPGPPLS(ph)PEIR ddPTM_A549_MK2206_60min_R1 2 KPGPPLSPEIR 11 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPPLS(1)PEIR;KPGPPLS(1)PEIR 90.70700000000001 0.00012475 111599000.0 6309.9 6923.9 6231.299999999999 6278.0 9003.0 6662.700000000001 6053.799999999999 6459.0 9986.8 9883.5 10096.7 True False 7374.856857756327 7276.296935631972 7114.992039355871 7816.1102818301315 7678.670626201985 7367.742491657686 7153.697098343547 7374.583029857905 7724.805745642529 7650.810485611141 7589.410735256125 0.9717298371396476 0.9587433319204082 0.9374893898288609 1.0298705070106284 1.011761109532682 0.9707924302253542 0.9425892665304701 0.9716937568815124 1.0178399898370811 1.008090186774289 1.0 12.889772159456161 -8.75457913124796 24.95982075323417 1.0084244400285067 0.9745084942126222 0.2607679403224993 0.02572528016534607 165.73109803098203 602982.6561886029 0.0046609338148032595 0.005228216871671413 1.759628019047693e-09 8.75457913124796 -0.03391594581588453 KPGPPLS(ph)PEIR ddPTM_A549_PD325901_60min_R1 2 KPGPPLSPEIR 11 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPPLS(1)PEIR;KPGPPLS(1)PEIR 94.53200000000001 0.00012019 169745000.0 8627.3 8754.3 8038.7 8977.3 11433.400000000001 9978.3 8240.2 9308.2 10696.3 9857.2 10944.0 True False 9503.137144917415 9492.055584218524 8584.25452263004 9531.807432072417 10630.35742708872 9897.040033094818 8553.78532021046 9122.54064885836 10246.77170838522 9234.814709759727 9597.957379731934 0.9901207901782569 0.9889662152764875 0.8943834800472718 0.9931079140027017 1.1075645584274953 1.0311610732919547 0.8912089293367297 0.9504668845605092 1.0675992091841742 0.9621645881925818 1.0 13.228511691362172 -6.640348974057089 0.4227039714114965 1.0246380403098425 0.9567542140554909 0.0 0.06496781199045226 4.355243950640253 1.0636367921785066 0.019030114634017953 0.12419100166999485 2.2890275827208685e-07 6.640348974057089 -0.06788382625435163 KPGPPLS(ph)PEIRS(ph)PAGS(ph)PELR ddPTM_A549_PD325901_60min_R1 2 KPGPPLSPEIRSPAGSPELR 20 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 3 KPGPPLS(1)PEIRS(1)PAGS(1)PELR;KPGPPLS(1)PEIRS(1)PAGS(1)PELR 45.07 0.010763 22859800.0 6004.4 6110.7 5677.1 5620.200000000001 5854.200000000001 6352.5 5332.1 5569.799999999999 6027.1 6563.7 7213.6 True False 6613.962267794343 6625.670134503515 6062.382145175584 5967.346989599708 5443.021187893606 6300.7673461646655 5535.015983337077 5458.705969576425 5773.8019468048315 6149.2668618319485 6326.372930777986 1.0454588024074942 1.0473094468189568 0.95827138417369 0.943249323884843 0.8603699540716533 0.9959525647802474 0.8749114293292869 0.8628492232918586 0.9126559578419918 0.9720051171684155 1.0 12.62716288786576 -5.809668131698669 3.824754181370977 0.9401875521893432 1.0487153949392576 0.45836826248091234 0.04780102301799263 0.17370777596687256 5.1673374334113396 0.007603813410763616 0.028365369278324164 1.5500006071989714e-06 5.809668131698669 0.10852784274991434 KPGPSGPSES(ph)PK ddPTM_A549_MK2206_60min_R1 6 KPGPSGPSESPK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPSGPS(0.042)ES(0.958)PK;KPGPS(0.002)GPS(0.076)ES(0.922)PK;KPGPSGPS(0.005)ES(0.995)PK;KPGPSGPS(0.012)ES(0.988)PK;KPGPSGPS(0.003)ES(0.997)PK;KPGPSGPS(0.004)ES(0.995)PK 108.34 4.8538e-05 580228400.0 12962.91 12807.429999999998 11880.79 10715.869999999999 16482.0 12226.599999999999 12050.580000000002 12632.96 17077.5 16638.8 16825.1 True False 15150.732295278547 13459.273482043498 13565.664672100333 13341.258631053677 14057.519633573373 13520.410696639767 14240.014400765924 14423.720766817423 13209.473517163673 12880.083523851536 12646.963320863042 1.197973925510258 1.0642296605573631 1.0726420507381211 1.0548981832694408 1.1115332018385322 1.0690638024019445 1.1259631296055794 1.1404888589360702 1.0444778862743032 1.01843289943001 1.0 13.6265033986308 -9.024388358806071 2.9676575772490907 1.0173311315380058 1.100173832356498 0.4604402652295475 0.040326142217757245 0.15761921112035465 2.8401106678491987 0.0075308850400929465 0.007547488747901474 9.453913866828208e-10 9.024388358806071 0.08284270081849221 KPGPSGPSES(ph)PK ddPTM_A549_PD325901_60min_R1 4 KPGPSGPSESPK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPS(0.001)GPS(0.016)ES(0.982)PK;KPGPSGPS(0.082)ES(0.917)PK;KPGPSGPS(0.008)ES(0.992)PK;KPGPSGPS(0.038)ES(0.962)PK 117.18 9.384199999999999e-06 843322800.0 14207.300000000001 14668.34 12861.960000000001 13121.12 16201.500000000002 12979.210000000001 14372.32 15651.3 14270.499999999998 14728.699999999999 14753.990000000002 True False 15649.614637138526 15904.492490343713 13734.849950848595 13931.58178217439 15063.562532140742 12873.511617003358 14919.266502435285 15339.122543292673 13670.760512000526 13798.727368384327 12939.342763248462 1.2094597788682153 1.229157676811619 1.0614797213549059 1.0766838808648131 1.1641675166783347 0.9949123268894241 1.1530157887779577 1.1854638078574047 1.0565266537980202 1.066416403124954 1.0 13.659476718960024 -2.000000001235915 0.05666022697642803 0.8024287225220527 1.7306022696660979 0.2697588231074418 0.06724898851782103 212.79135238320515 0.879142049081693 3.0258719429582377 16.484065626758323 0.009999999971542007 2.000000001235915 0.9281735471440452 KPHRPS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 KPHRPSPAK 9 2 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 KPHRPS(1)PAK 49.5 0.0061828000000000004 2289600.0 1214.8 1451.0 1029.4 919.01 1412.7 1585.4 1194.4 1211.4 1507.1 1639.6 1407.8 True False 1338.1256017115065 1573.2808622849427 1099.2612742850656 975.7751604768555 1313.4768255504262 1572.4890280376949 1239.8535456007592 1187.2376766750845 1443.7618280814263 1536.0753761841127 1234.649524779479 1.0838100812054412 1.274273249783939 0.8903427670953058 0.7903256275509756 1.0638458924487308 1.273631906446129 1.004214978191653 0.9615989419241361 1.1693697677802912 1.244138798383672 1.0 10.269885852284775 -6.980039111814202 24.998002900715488 1.0814057350916708 1.0084402209993495 0.07486566262124095 0.1464669977569183 656.87211746105 822629.1992056267 0.021228989767644136 0.04011614244533092 1.047034249700803e-07 6.980039111814202 -0.07296551409232133 KPIDSLRDS(ph)R ddPTM_A549_MK2206_60min_R1 4 KPIDSLRDSR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 KPIDSLRDS(1)R;KPIDS(0.001)LRDS(0.999)R;KPIDSLRDS(1)R;KPIDS(0.001)LRDS(0.999)R 77.527 0.00028672 83323000.0 9993.52 10486.099999999999 9509.619999999999 7684.08 17707.9 11762.2 9551.480000000001 11004.500000000002 19255.1 13783.800000000001 14081.1 True False 11680.181857893942 11019.797700245594 10858.227111084265 9566.679944951462 15103.091367513285 13006.868196883544 11286.860279640297 12564.42157486784 14893.850594076319 10670.03000673514 10584.374251410363 1.1035306934973093 1.0411383269801906 1.0258733160004627 0.9038493648953037 1.4269234069742767 1.2288745548798394 1.0663701047925747 1.1870726862472418 1.4071545695856058 1.008092661246683 1.0 13.369648359232947 -6.737887703662641 24.99997644834198 1.2026697124963248 1.0207276720146419 0.25608905399401427 0.138664642931612 290.2929844083816 308142.86219061504 0.023628585271728404 0.04916521088432592 1.8285729725566893e-07 6.737887703662641 -0.18194204048168294 KPIDSLRDS(ph)R ddPTM_A549_PD325901_60min_R1 3 KPIDSLRDSR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 KPIDS(0.02)LRDS(0.98)R;KPIDS(0.017)LRDS(0.983)R;KPIDS(0.005)LRDS(0.995)R 65.563 0.0011300000000000001 74278000.0 8972.7 9244.4 10768.699999999999 9698.0 10739.2 8626.3 9624.0 10686.4 9531.300000000001 11597.0 11082.800000000001 True False 9883.601898647374 10023.45803122462 11499.528739453648 10297.023434243965 9984.915640228728 8556.050272840645 9990.246586454869 10473.251368681373 9130.732606988582 10864.763440843599 9719.685859657631 1.0168643350573798 1.0312532910994399 1.1831173255489051 1.0593987895208241 1.0272878963786223 0.8802805354392416 1.0278363653624056 1.077529821426789 0.9394061432465067 1.1178101430148795 1.0 13.246693971328755 -6.905737704514716 3.7597580843618945 0.9778616692386769 1.0774507319799023 0.07215102240229232 0.07455758697039226 0.19973583404184847 5.462537201653878 0.009136268219863783 0.017892539420163278 1.2424024395336556e-07 6.905737704514716 0.09958906274122536 KPIET(ph)GSPK ddPTM_A549_MK2206_60min_R1 1 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 KPIET(0.609)GS(0.391)PK 42.041000000000004 0.050741 2528400.0 2216.3 3929.2 2933.3 4509.5 4019.7 3082.6 2520.3 3123.5 6284.8 4411.5 4363.4 True False 2590.357256667356 4129.179497029873 3349.286047701536 5614.3277024391455 3428.407454864392 3408.7986859357275 2978.205886708386 3566.26569031757 4861.302834763302 3414.939086080188 3279.8473562863683 0.7897798206073552 1.2589547770007101 1.021171318013345 1.7117649367670604 1.0452948208986872 1.0393162594601248 0.9080318573363372 1.087326726800939 1.4821734997654124 1.0411884198009687 1.0 11.67941295820878 KPIETGS(ph)PK ddPTM_A549_MK2206_60min_R1 8 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 KPIET(0.018)GS(0.982)PK;KPIET(0.056)GS(0.944)PK;KPIET(0.036)GS(0.964)PK;KPIET(0.086)GS(0.914)PK;KPIET(0.054)GS(0.946)PK;KPIET(0.042)GS(0.958)PK;KPIET(0.022)GS(0.978)PK;KPIET(0.225)GS(0.775)PK 100.02 0.00033021 1307629100.0 41873.4 43395.5 42163.99999999999 38689.799999999996 54501.200000000004 41818.299999999996 39741.9 40895.399999999994 56900.6 59979.6 58275.9 True False 48940.606213660125 45604.145592833134 48143.48921531638 48168.80273685109 46484.14567730306 46243.48474925908 46962.48880251403 46692.448186909896 44012.70495158682 46430.16670235863 43804.385696981466 1.1172535679922249 1.0410862946076125 1.099056371851687 1.0996342482704962 1.0611756091926259 1.055681617570217 1.0720955916920938 1.0659308981047404 1.00475567117974 1.0599433358920065 1.0 15.418787699296777 -8.72964020275121 3.7710080935376373 1.0018441858890486 1.0763093650241748 0.40698309653754194 0.027037861218127294 0.07863307547595773 2.3471313162915224 0.003406376278619798 0.0037646191727465947 1.8636304476140536e-09 8.72964020275121 0.07446517913512629 KPIETGS(ph)PK ddPTM_A549_PD325901_60min_R1 6 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 KPIET(0.004)GS(0.996)PK;KPIET(0.068)GS(0.932)PK;KPIET(0.002)GS(0.998)PK;KPIET(0.043)GS(0.957)PK;KPIET(0.134)GS(0.866)PK;KPIET(0.093)GS(0.907)PK 111.88 0.00012637 2166462000.0 50243.1 49447.1 53858.2 49313.6 58705.9 52928.3 53916.4 52381.6 58352.0 52927.0 59846.399999999994 True False 55343.74252498464 53614.18065161255 57513.3413276665 52359.589072688555 54582.6001083604 52497.26947312197 55968.218106186156 51336.80789542978 55899.6683645461 49585.18018742166 52485.67219758677 1.0544542959579222 1.0215012670463173 1.0957912687324007 0.9975977610723253 1.0399523874416539 1.000220960788909 1.066352316028059 0.9781108966684853 1.065046250224386 0.9447374514087205 1.0 15.679636021935437 -6.2796324205411445 24.97373379668358 1.026824501873214 1.0536741871225925 0.1321613237003797 0.03976985022570928 1300.7120388582516 1785497.1882560349 0.004575583147536885 0.010651848422317872 5.252518363828621e-07 6.2796324205411445 0.026849685249378474 KPIETGSPK ddPTM_A549_MK2206_60min_R1 2 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 0 ; 82.417 0.0015302999999999998 33187000.0 5533.0 6610.8 6285.5 5759.2 7488.0 5434.8 6242.200000000001 5511.2 7796.6 8460.900000000001 8428.6 False True 6466.8351311377 6947.261482990203 7176.878414355166 7170.204258540311 6386.52511929362 6009.906928671736 7376.3269396544465 6292.429477342143 6030.68254861182 6549.57681364975 6335.546002474053 1.020722622582549 1.0965529222386314 1.1327955651419104 1.13174211910707 1.0080465230304791 0.9486012612527548 1.1642764391220528 0.9931945052383689 0.9518804766403427 1.033782536042216 1.0 12.629253242010444 -7.798856385062673 0.7184111102848589 0.9777304528164058 1.088606543303999 0.16126718654191774 0.0658409618597651 0.5828362326586655 0.6088488439698206 0.013939394526373272 0.025656152739525147 1.5890721450201526e-08 7.798856385062673 0.11087609048759328 KPIETGSPK ddPTM_A549_PD325901_60min_R1 3 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 0 ;; 83.86200000000001 0.0014135999999999999 22320300.0 9819.0 10257.1 10473.4 10373.9 11495.9 12411.500000000002 12017.1 11551.6 12162.099999999999 11395.0 11849.8 False True 10815.81765163424 11121.501814295585 11184.187905670502 11014.672242163695 10688.467642702013 12310.424859019706 12474.41731650944 11321.19427594511 11650.969231842017 10675.51775531714 10392.34972207123 1.040748044560476 1.0701623898083206 1.0761943357157784 1.059882753827152 1.0284938371542567 1.1845660691032054 1.2003461825400585 1.089377722912962 1.1211101958104561 1.027247739040625 1.0 13.343234265660387 -3.7038110945080676 16.595938183297445 1.0755641092552866 0.4328376642524988 0.0 0.06139655806751125 0.0 0.0 0.009183267570035514 0.0 0.00019778297515614986 3.7038110945080676 -0.6427264450027877 KPIKS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 KPIKSPSK 8 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KPIKS(0.99)PS(0.01)K 53.08 0.025426 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KPIKS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 KPIKSPSK 8 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KPIKS(0.954)PS(0.046)K 57.019 0.015538999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KPIKS(ph)PSKDASSGK ddPTM_A549_MK2206_60min_R1 2 KPIKSPSKDASSGK 14 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KPIKS(0.988)PS(0.012)KDASSGK;KPIKS(0.978)PS(0.016)KDAS(0.005)S(0.001)GK 52.453 0.006431699999999999 13050500.0 2642.8999999999996 2546.5 2067.94 2131.38 2500.8 2259.05 2042.8000000000002 2223.4 3039.2 2992.7 3107.4 True False 3088.9569072987215 2676.1059730190823 2361.2049873807373 2653.568195681283 2132.9356327897276 2498.1011715639734 2413.9503175685013 2538.573758876926 2350.826052605114 2316.6469914795816 2335.7468201228994 1.3224707749516236 1.1457174852873284 1.010899369331689 1.1360684183834877 0.9131707316966398 1.069508540070508 1.0334811533389938 1.0868360119370106 1.006455850588045 0.9918228172339703 1.0 11.189668188525387 KPISDNSFS(ph)SDEEQSTGPIK ddPTM_A549_MK2206_60min_R1 2 KPISDNSFSSDEEQSTGPIK 20 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 KPIS(0.003)DNS(0.008)FS(0.781)S(0.207)DEEQSTGPIK;KPISDNS(0.007)FS(0.938)S(0.055)DEEQSTGPIK 187.72 3.0739e-44 32656000.0 5588.6 6001.8 5436.9 5553.3 7242.1 6230.1 6208.2 5775.5 9053.4 8798.4 9387.2 True False 6531.819051848213 6307.265984239514 6207.934174052597 6913.858749297115 6176.796683551858 6889.365046794316 7336.149579757576 6594.194811726947 7002.819355309016 6810.835329245813 7056.099166459966 0.925698306919518 0.8938743398363914 0.8797969001854473 0.9798414940312958 0.8753840525530407 0.9763702130976002 1.0396891266252017 0.9345382847043013 0.9924491124778678 0.965240874394173 1.0 12.784655121344748 -7.412723354975807 5.876057836900153 0.9942314658803759 0.9124143989467403 0.5094614493147951 0.03572829364157872 0.12273449186142842 5.665672580132406 0.004802505269452119 0.007701078886721578 3.866131707237596e-08 7.412723354975807 -0.08181706693363566 KPISDNSFSS(ph)DEEQSTGPIK ddPTM_A549_PD325901_60min_R1 2 KPISDNSFSSDEEQSTGPIK 20 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 KPISDNS(0.003)FS(0.329)S(0.668)DEEQSTGPIK;KPISDNS(0.004)FS(0.401)S(0.595)DEEQSTGPIK 240.26 9.433399999999998e-86 51545000.0 7657.2 7655.5 8270.4 7785.4 9493.0 8696.0 7599.9 9446.3 8283.9 9294.6 9380.0 True False 8434.553307067294 8300.655851979589 8831.679077955325 8266.286476073728 8826.244429072121 8625.182659149606 7889.118353324849 9257.886136021005 7935.756491038234 8707.737369773637 8226.31946471908 1.0253131237172692 1.0090364090015373 1.07358814787494 1.0048584317112967 1.0729275062713028 1.0484862271810822 0.9590094801398834 1.1253983237249774 0.9646788609502698 1.0585216641681927 1.0 13.006031383879014 KPIST(ph)HT(ph)VDFTFNK ddPTM_A549_MK2206_60min_R1 1 KPISTHTVDFTFNK 14 1 P18084 P18084 ITGB5 Integrin beta-5 2 KPIS(0.49)T(0.546)HT(0.49)VDFT(0.474)FNK 47.754 0.013636 3349500.0 1713.9 1888.4 1960.6 1605.7 2460.6 1948.8 1573.2 2072.3 3158.2 2806.3 2836.7 True False 2003.164419168065 1984.5114939914536 2238.642561321253 1999.0965720826132 2098.6489995371094 2155.0207224912565 1859.0300761693582 2366.0548711525857 2442.8727426090677 2172.354880940005 2132.269101062829 0.9394519754423061 0.9307040527868993 1.0498874462915597 0.9375442204204731 0.9842327117581163 1.0106701454413454 0.8718552809505727 1.109641775502551 1.1456681248119285 1.0187995876586098 1.0 11.05817380825151 -8.281740551992753 24.92053490329885 1.0737737906980542 0.9648490739091241 0.4507347785840595 0.05707345251705363 618.7539087780228 759544.3123863642 0.010950120805285691 0.01324647529712709 5.227083623013769e-09 8.281740551992753 -0.10892471678893012 KPKAEEDEILNRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KPKAEEDEILNRSPR 15 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 KPKAEEDEILNRS(1)PR;KPKAEEDEILNRS(1)PR 66.874 0.00094228 44473000.0 3682.8999999999996 5138.6 4927.200000000001 3419.0 7667.6 4580.8 4938.7 4495.8 8516.4 7422.4 7970.700000000001 True False 4304.4834817399305 5400.132791264818 5625.951049751138 4256.655153484743 6539.706197208302 5065.537215511057 5835.997862431738 5133.093417810059 6587.448997896226 5745.674684919317 5991.355209871147 0.7184490538381056 0.9013207533360312 0.9390114344217179 0.7104661640611171 1.0915236984169643 0.8454743606530382 0.9740697484963924 0.8567499735874371 1.0994923130317786 0.9589941647013257 1.0 12.548666653856694 -7.39773867511995 0.5015709888088141 1.044378669900615 0.8135011110324677 0.22128537276776383 0.10880195243952136 0.8298725585693156 0.3973705221578334 0.027065403659339477 0.07894255596520472 4.00185478043645e-08 7.39773867511995 -0.23087755886814731 KPKAEEDEILNRS(ph)PR ddPTM_A549_PD325901_60min_R1 4 KPKAEEDEILNRSPR 15 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 KPKAEEDEILNRS(1)PR;KPKAEEDEILNRS(1)PR;KPKAEEDEILNRS(1)PR;KPKAEEDEILNRS(1)PR 123.19 1.0187999999999998e-07 113692000.0 11208.2 12078.2 17986.0 16117.7 13411.400000000001 25864.800000000003 20165.5 20320.0 19019.7 21325.5 21655.0 True False 12346.048212959255 13096.07230244658 19206.63811860423 17113.253723047426 12469.429530818279 25654.165644247125 20932.909137485014 19914.70165926839 18220.368151788407 19979.00429056739 18991.57228235519 0.6500803635110189 0.689572833030468 1.011324277582265 0.9010972587534058 0.656576998756625 1.350818418972191 1.102220965503393 1.0486073171398698 0.9593922967987596 1.0519931679974495 1.0 14.213071728431206 -5.324658612758209 0.777096508350618 1.0045560840629295 0.41642521446601294 0.3979794012092325 0.15806130640288055 1.9001757462057447 0.8576573785860814 0.0245026887988356 0.9464561575785019 4.7352333669434364e-06 5.324658612758209 -0.5881308695969165 KPKS(ph)QETPATK ddPTM_A549_PD325901_60min_R1 2 KPKSQETPATK 11 2 M0QXK2;M0R221;M0R2B8;M0QZG7;M0R268;P09012 M0QXK2 SNRPA U1 small nuclear ribonucleoprotein A 1 KPKS(0.792)QET(0.208)PATK;KPKS(0.998)QET(0.002)PATK 58.071000000000005 0.0024773000000000004 12478000.0 5415.2 5291.7 6108.4 5357.0 7242.4 6448.4 5756.6 6253.4 7029.2 6237.8 6642.8 True False 5964.947117540461 5737.650130222765 6522.952756793177 5687.889723370277 6733.718808923622 6395.886368360205 5975.6705631323875 6128.671031302605 6733.787168701455 5843.9442434503935 5825.777712178664 1.0238885539815339 0.984872821053287 1.1196707253620548 0.9763314023258843 1.1558489083520862 1.0978596651550472 1.0257292430915061 1.0519919114817493 1.1558606423696216 1.0031183014816636 1.0 12.50823493985549 -5.74709696937871 24.980842596929396 1.0732591393400315 1.0043806688567416 0.12115825427113591 0.059967744212477817 356.80758509566385 621457.7808866957 0.008996536573544833 0.03452295224072545 1.7902060917510777e-06 5.74709696937871 -0.06887847048328988 KPLAAPGDGEGLGQTAQPS(ph)PPAR ddPTM_A549_MK2206_60min_R1 2 KPLAAPGDGEGLGQTAQPSPPAR 23 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 KPLAAPGDGEGLGQTAQPS(1)PPAR;KPLAAPGDGEGLGQTAQPS(1)PPAR 157.82 2.9038e-33 19742800.0 1832.69 2062.21 1808.45 1814.65 2769.4 1961.64 1965.99 2024.25 2939.0 3419.0 2885.0 True False 2142.003267031402 2167.167680588919 2064.915403458848 2259.239331462733 2362.0249286019966 2169.219442768753 2323.1849348132455 2311.19363650563 2273.3211926185945 2646.645525401374 2168.574878050644 0.987746970930915 0.9993510957468114 0.9521992642997981 1.0418083112230776 1.0892060737719358 1.0002972296343708 1.071295696693481 1.065766121289382 1.0483019127576116 1.2204538345387792 1.0 11.082531543093591 -6.276934067539682 24.746436752124502 1.0339485697296662 0.9817243079975823 0.1510483191866655 0.06325718610244074 592.7081223476583 946608.4584423056 0.0046324720265318725 0.010799278926609592 5.285254838341321e-07 6.276934067539682 -0.05222426173208394 KPLAAPGDGEGLGQTAQPS(ph)PPAR ddPTM_A549_PD325901_60min_R1 2 KPLAAPGDGEGLGQTAQPSPPAR 23 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 KPLAAPGDGEGLGQTAQPS(1)PPAR;KPLAAPGDGEGLGQTAQPS(1)PPAR 175.39 5.2203e-41 37149000.0 2242.7 2534.1 2495.0 2567.1000000000004 3374.5 2755.2 2369.4 3354.6 2869.6000000000004 3011.9 3059.0 True False 2470.37725301152 2747.657500424722 2664.3257036538184 2725.6639366928935 3137.486761393012 2732.762564683649 2459.5688135854293 3287.689871367209 2749.0006913028087 2821.728119985931 2682.7623925986845 0.9208334140313353 1.0241896591383093 0.9931277220093252 1.0159915556489711 1.1694985623955516 1.0186375700743782 0.9168045669534466 1.2254867894515828 1.0246903336974102 1.0517994913640623 1.0 11.389503568034478 -4.264539525736289 1.255383626357693 1.030834478574032 3.3151164511103267e-10 0.14181898635345802 0.08164383036413654 23.656691643769218 4.477770270817572 0.011345538132691875 56.41078538833144 5.438266350603275e-05 4.264539525736289 -1.0308344782425203 KPLEIRS(ph)PSAESK ddPTM_A549_MK2206_60min_R1 3 KPLEIRSPSAESK 13 2 Q96B01-2;Q96B01;H0YGT5 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 KPLEIRS(0.986)PS(0.014)AESK;KPLEIRS(0.997)PS(0.003)AESK;KPLEIRS(0.996)PS(0.004)AESK 93.76799999999999 3.5870999999999996e-05 62517600.0 8903.7 10635.4 10293.8 10347.5 11391.599999999999 9879.3 9759.800000000001 9007.7 14019.8 13968.1 14386.699999999999 True False 10406.42688543479 11176.696432533734 11753.615626710547 12882.637964516925 9715.91073036127 10924.72096865141 11533.02932710254 10284.569059924304 10844.337685020133 10812.696508733232 10814.085337279437 0.9623030113846684 1.0335313698703916 1.0868802362962926 1.191283179549782 0.8984496078339215 1.0102306970882298 1.0664821820246493 0.9510345756631188 1.0027974948224614 0.9998715722594294 1.0 13.400624025878011 -6.774503736830948 24.999679958118186 0.9972441212673705 1.067314679802637 0.2552286154428044 0.06383457299109112 261.4089468345044 500226.75748184667 0.008876075139473747 0.01684737029306166 1.6807234640778888e-07 6.774503736830948 0.07007055853526645 KPLEIRS(ph)PSAESK ddPTM_A549_PD325901_60min_R1 4 KPLEIRSPSAESK 13 2 Q96B01-2;Q96B01;H0YGT5 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 KPLEIRS(0.997)PS(0.003)AESK;KPLEIRS(1)PSAESK;KPLEIRS(0.995)PS(0.005)AESK;KPLEIRS(0.972)PS(0.027)AES(0.001)K 131.45 7.9222e-09 114625000.0 14010.9 14653.699999999999 14791.7 14676.4 18511.800000000003 16707.4 16687.0 17187.4 16723.9 16254.0 18405.0 True False 15433.276253720565 15888.618726164628 15795.553711717894 15582.927895477222 17211.595030243065 16571.34047372082 17322.03291647678 16844.583823745532 16021.052641928842 15227.719666074998 16141.301678907736 0.9561357913214419 0.9843455653224489 0.9785799203764564 0.9654071403572021 1.0663077472081393 1.0266421384946312 1.0731496914596383 1.0435703488372807 0.9925502267802834 0.9434009703178685 1.0 13.978469305747698 KPLPDHVSIVEPKDEILPT(ph)TPISEQK ddPTM_A549_PD325901_60min_R1 1 KPLPDHVSIVEPKDEILPTTPISEQK 26 2 P23396;P23396-2;E9PL09;E9PPU1;H0YEU2;E9PSF4 P23396 RPS3 40S ribosomal protein S3 1 KPLPDHVSIVEPKDEILPT(0.496)T(0.496)PIS(0.008)EQK 103.16 1.8781e-12 4599900.0 1571.2 1479.2 2153.0 1885.3 2428.3 2022.1 2513.1 2237.2 2199.8 2392.8 2206.7 True False 1730.7070673436933 1603.857375252852 2299.1155270407485 2001.7506991730406 2257.7445851802204 2005.632688025118 2608.7373957210857 2192.577290950552 2107.3500560105654 2241.7181996421978 1935.2898894238374 0.8942882804285971 0.8287427036217001 1.1879954210504489 1.03434152687533 1.1666182919254449 1.0363474221540125 1.3479827544067535 1.1329451483897912 1.0889066632999114 1.1583371627645862 1.0 10.91833397026155 -5.749901349638978 24.99981676737846 1.0839541139214268 0.8615153839181642 0.4747756140214051 0.0996588896681773 162.33228395333018 351723.70951186604 0.014206633919485265 0.054083906721102 1.7786833936005781e-06 5.749901349638978 -0.22243873000326264 KPLS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 KPLSPPK 7 1 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 KPLS(1)PPK;KPLS(1)PPK 49.368 0.022916 29337000.0 5637.0 5574.4 6253.4 5202.8 7049.5 6268.5 5682.7 5527.7 7476.9 6829.3 7110.099999999999 True False 6209.264090259932 6044.174251358504 6677.793328749013 5524.1651395838835 6554.367439454746 6217.4514143145525 5898.95825819276 5417.445687103239 7162.6718946201445 6398.0968325043705 6235.602774637427 0.9957760804641655 0.9693007187600956 1.0709138426697327 0.8859071591366866 1.051120104396941 0.9970890768737383 0.94601251416881 0.8687926224451076 1.1486735370241128 1.0260590778052556 1.0 12.606313311909851 -8.772300364193965 24.999944086492842 1.0702069380227708 0.9758359849363046 0.23796628300219158 0.06678971066362022 217.61809769401302 500914.5857216393 0.012926750461844697 0.013827198234045303 1.6892722030347197e-09 8.772300364193965 -0.09437095308646615 KPLS(ph)PVR ddPTM_A549_MK2206_60min_R1 1 KPLSPVR 7 1 Q9UQ84;H0YAZ2 Q9UQ84 EXO1 Exonuclease 1 1 KPLS(1)PVR 52.79 0.019437 3321400.0 798.31 912.86 761.37 877.56 817.69 660.27 579.52 586.83 895.11 983.89 1058.1 True False 933.0452111943862 959.3206748596893 869.3437146348884 1092.5622393951658 697.4088841873933 730.1393331482458 684.8112825716162 670.0149495915024 692.3690141969479 761.6285656587182 795.3445679256098 1.1731333170828366 1.2061698961014549 1.093040362244858 1.3736967390683874 0.876863830234424 0.9180163700024632 0.8610246554618677 0.8424209790468705 0.8705271175771789 0.9576083076108404 1.0 9.63543620582079 -6.778474741728256 24.999497386176945 0.9189601251885178 1.2026665306700184 0.7900412254289162 0.07600745766527044 90.15124621214747 132297.40562710701 0.011807180270210183 0.02235306312244752 1.6654256849937596e-07 6.778474741728256 0.2837064054815006 KPLS(ph)PVRDNIQLTPEAEEDIFNKPECGR ddPTM_A549_MK2206_60min_R1 2 KPLSPVRDNIQLTPEAEEDIFNKPECGR 28 3 Q9UQ84;H0YAZ2 Q9UQ84 EXO1 Exonuclease 1 1 KPLS(0.997)PVRDNIQLT(0.003)PEAEEDIFNKPECGR;KPLS(0.999)PVRDNIQLT(0.001)PEAEEDIFNKPECGR 101.95 2.6425000000000002e-15 21178800.0 2338.05 2432.1 2249.4300000000003 2082.56 2749.5 2561.8 2198.7 2300.29 3421.7 2831.0 3307.1000000000004 True False 2732.655680165643 2555.883501660989 2568.432998425412 2592.7872934896695 2345.0521922406265 2832.8879756147885 2598.175329566216 2626.3631518426764 2646.6904133321027 2191.47513378511 2485.855798683288 1.0992816564875083 1.0281704606577717 1.0332188213756661 1.0430159685300415 0.9433580956235504 1.1396026982399048 1.0451834458549132 1.0565227288058352 1.0646998972080384 0.8815777387191541 1.0 11.2795268945849 -10.866751897518583 1.1057824895744657 0.9999057849321106 1.049579938187095 0.24195126963867242 0.05844570923015483 0.796900170061492 1.7246117344310263 0.03045882089252847 0.007324004222783681 1.3590896416102894e-11 10.866751897518583 0.049674153254984366 KPLS(ph)PVRDNIQLTPEAEEDIFNKPECGR ddPTM_A549_PD325901_60min_R1 4 KPLSPVRDNIQLTPEAEEDIFNKPECGR 28 3 Q9UQ84;H0YAZ2 Q9UQ84 EXO1 Exonuclease 1 1 KPLS(1)PVRDNIQLTPEAEEDIFNKPECGR;KPLS(1)PVRDNIQLTPEAEEDIFNKPECGR;KPLS(1)PVRDNIQLTPEAEEDIFNKPECGR;KPLS(0.999)PVRDNIQLT(0.001)PEAEEDIFNKPECGR 140.49 5.7589e-30 76597000.0 10352.3 11138.400000000001 12388.5 10261.670000000002 11567.900000000001 10915.300000000001 12077.8 13192.9 9508.6 12187.3 13143.300000000001 True False 11403.25787503953 12077.0720582182 13229.258108102322 10895.510049956518 10755.410611088531 10826.409415756189 12537.427288225748 12929.757259870166 9108.986609047215 11417.791798102366 11526.757422243314 0.9892858379265043 1.0477423629053682 1.1476998798095355 0.9452363445188262 0.9330820643742961 0.9392415420198177 1.0876803275162306 1.1217167835005764 0.7902470985872836 0.9905467235798096 1.0 13.492699106869065 -8.757625482540831 24.999116689866888 0.9009500212989985 1.0245245895829158 0.1918195297883144 0.08655170645170289 105.73800088234191 693084.9043087275 0.01738180887952989 0.01934348586707077 1.7473283265141035e-09 8.757625482540831 0.12357456828391733 KPLSLAGDEETECQSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KPLSLAGDEETECQSSPK 18 1 F5H1K3;Q86TN4-2;Q86TN4;Q86TN4-4 F5H1K3 TRPT1 tRNA 2-phosphotransferase 1 1 KPLSLAGDEETECQS(0.198)S(0.802)PK;KPLSLAGDEETECQS(0.164)S(0.836)PK 191.99 1.0556e-40 28728000.0 4503.5 4874.2 4567.200000000001 4051.8 6003.4 5809.6 4421.5 4558.1 7085.4 6364.299999999999 7270.8 True False 5263.580699996135 5122.275960608525 5214.897636471706 5044.4911818922155 5120.30781265589 6424.368015899633 5224.829317176978 5204.22463359581 5480.56821305879 4926.6002098016825 5465.259696128463 0.9630980031424317 0.9372429208143751 0.9541902720864097 0.9230103347999519 0.9368828010648912 1.175491810654596 0.9560075106546533 0.9522373908933244 1.0028010593789665 0.9014393612972571 1.0 12.41607433562148 KPLSLAGDEETECQSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KPLSLAGDEETECQSSPK 18 1 F5H1K3;Q86TN4-2;Q86TN4;Q86TN4-4 F5H1K3 TRPT1 tRNA 2-phosphotransferase 1 1 KPLSLAGDEETECQS(0.159)S(0.841)PK;KPLSLAGDEETECQS(0.16)S(0.84)PK 192.63 7.663899999999999e-41 49057000.0 6762.299999999999 6821.3 8019.0 7350.7 7230.1 6577.700000000001 7948.6 7433.4 6214.4 6906.700000000001 7289.9 True False 7448.803717857849 7396.154890354436 8563.217562164315 7804.73604434905 6722.282718490922 6524.133392029484 8251.08832264082 7285.135005610511 5953.230379158128 6470.609783295205 6393.288514483543 1.165097383135942 1.1568623680284364 1.3394073398635071 1.2207701915325693 1.0514593081889025 1.0204659741617357 1.2905859486786126 1.1394973008189062 0.931168735099551 1.0120941309994842 1.0 12.642342485499409 -8.686053199683816 5.472776668385831 0.9676122903650239 1.1762531396345541 0.4813733904600467 0.08885790738255252 0.12032904381489662 6.353695081326318 0.015714742459453073 0.01774729370230323 2.06037750816162e-09 8.686053199683816 0.2086408492695302 KPLT(ph)SSSAAPQRPISTQR ddPTM_A549_MK2206_60min_R1 2 KPLTSSSAAPQRPISTQR 18 2 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 KPLT(0.481)S(0.481)S(0.019)S(0.019)AAPQRPISTQR;KPLT(0.476)S(0.476)S(0.037)S(0.011)AAPQRPISTQR 58.093 0.011444 40359000.0 4449.3 4107.3 3576.4 3259.3 4678.7 3613.5 3119.0 3289.5 5554.4 5037.0 5294.4 True False 5200.233065058909 4316.344026303271 4083.587297923761 4057.8286463155355 3990.46942783641 3995.8781715528266 3685.6819270100614 3755.796698671246 4296.337268554176 3899.1382016515695 3979.654361993528 1.3067047014741142 1.0846027402593539 1.0261160710143105 1.019643485893797 1.0027175892324138 1.0040766880948857 0.9261311641053654 0.9437494709439679 1.0795754801183317 0.9797680519416703 1.0 11.958427420985922 -5.207034982225239 2.0243447501655085 1.017932238291939 1.4176535769861591 0.8095577505304857 0.04264157118032844 0.33517371795291423 1.3023394398516621 0.0070768090296540204 0.2581710449849225 6.208190255226433e-06 5.207034982225239 0.3997213386942202 KPLT(ph)SSSAAPQRPISTQR ddPTM_A549_PD325901_60min_R1 1 KPLTSSSAAPQRPISTQR 18 2 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 KPLT(0.465)S(0.465)S(0.052)S(0.018)AAPQRPISTQR 50.255 0.033446 9756400.0 1206.9 1333.0 1183.8 1322.3 1761.2 1770.0 1557.4 2250.3 3703.2 4407.6 4331.7 True False 1329.4235995271795 1445.3365881639065 1264.1397867676912 1403.9754678388115 1637.4993878101566 1755.5857068416303 1616.6677092419795 2205.4160011738018 3547.5673822248937 4129.303383794279 3798.9283609087 0.34994700432023484 0.3804590270868344 0.3327622073045121 0.36957145132975916 0.431042449934083 0.462126563087306 0.42555888283591486 0.580536349110376 0.9338337144573895 1.0869653206112457 1.0 11.891376790996096 -8.628969726529194 1.9147983125003631 0.9774800758660825 0.388981135221724 0.9656487165454667 0.05049950473326394 0.03287128399771745 0.23702197006612896 0.00793584325900753 0.008966152622338458 2.349796612982034e-09 8.628969726529194 -0.5884989406443586 down KPLTS(ph)SSAAPQRPISTQR ddPTM_A549_MK2206_60min_R1 3 KPLTSSSAAPQRPISTQR 18 2 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 KPLT(0.111)S(0.775)S(0.081)S(0.032)AAPQRPISTQR;KPLT(0.043)S(0.905)S(0.043)S(0.01)AAPQRPISTQR;KPLT(0.072)S(0.833)S(0.072)S(0.023)AAPQRPISTQR 76.417 9.1949e-05 147490000.0 8467.8 8071.3 7990.2 7335.8 10458.7 7691.2699999999995 7743.8 7247.86 11627.5 11155.100000000002 11849.9 True False 9896.957622166605 8482.094694690326 9123.330507736959 9133.071329316572 8920.239084556113 8505.155086348172 9150.748222629216 8275.266350640335 8993.889815302047 8635.155162446586 8907.242789397682 1.1111134900181439 0.95226939415939 1.0242597763919141 1.0253533607714942 1.0014590704964168 0.954858342524567 1.0273379135372147 0.9290491509325882 1.0097277045156445 0.96945321539063 1.0 13.120763203540664 -5.246124224549258 24.438126053627965 0.9981433961716876 1.111113602812692 0.5142791537057049 0.03302694096274238 1192.1644839203186 1902275.2275198717 0.003972376871833731 0.12642548472471163 5.6738228952971565e-06 5.246124224549258 0.11297020664100443 KPLTS(ph)SSAAPQRPISTQR ddPTM_A549_PD325901_60min_R1 2 KPLTSSSAAPQRPISTQR 18 2 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 KPLT(0.06)S(0.834)S(0.086)S(0.02)AAPQRPISTQR;KPLT(0.047)S(0.859)S(0.067)S(0.027)AAPQRPISTQR 92.565 9.368899999999999e-07 58632000.0 5605.6 7067.0 6232.9 7273.200000000001 7964.4 7241.200000000001 7797.4 10607.0 14583.8 19457.5 20676.1 True False 6174.676385375385 7662.560891638659 6655.9020754724925 7722.449045364325 7405.008019688404 7182.230068012207 8094.134323900997 10395.435063969477 13970.893602530617 18228.95012936227 18133.070776596807 0.34052017231105963 0.4225738147742872 0.3670587380082826 0.4258765181312365 0.4083703257390675 0.39608459904551035 0.4463741648407162 0.5732859697093444 0.7704648470551361 1.0052875408664488 1.0 14.146335641036773 -8.864646067768353 0.7251632405891036 0.9565781655259031 0.37709620736937116 0.9709313251033674 0.04052286150317572 0.06975819294780061 0.07770305567216183 0.01297708168805026 0.012379832525537163 1.3656956692799468e-09 8.864646067768353 -0.579481958156532 down KPLTSSSAAPQRPIS(ph)TQR ddPTM_A549_MK2206_60min_R1 1 KPLTSSSAAPQRPISTQR 18 2 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 KPLT(0.014)S(0.014)S(0.014)S(0.003)AAPQRPIS(0.905)T(0.049)QR 44.258 0.010662 8366400.0 1573.2 1263.7 1445.2 1248.7 1723.6 1727.7 1063.0 1266.2 2115.4 2351.3 1863.7 True False 1838.7176989527964 1328.0169323008888 1650.1510913095346 1554.6315560562734 1470.0607232391133 1910.5240672455582 1256.1333403051294 1445.68772757487 1636.2652775996507 1820.1396969512277 1400.891854496702 1.3125336499393037 0.9479796231508569 1.1779289643327848 1.1097441612399161 1.0493748810947734 1.3637912599127442 0.8966668885061224 1.0319766818076488 1.1680168403773832 1.2992720966352886 1.0 10.45212987212006 -7.7884946432158735 24.999988062413973 1.064595761583158 1.14404967412752 0.0634169930194508 0.14321326787103927 437.15751640969324 403946.9908985517 0.019410546286574022 0.026822897464855913 1.627441389114955e-08 7.7884946432158735 0.07945391254436185 KPLTT(ph)TPR ddPTM_A549_MK2206_60min_R1 1 KPLTTTPR 8 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 KPLT(0.143)T(0.772)T(0.086)PR 59.908 0.0071343000000000005 35315000.0 2633.7 3366.8 2843.7 2796.1 3351.4 2766.7 2560.4 2406.0 4167.3 4097.8 3687.6 True False 3078.2041722171243 3538.1557392344957 3246.9794203964334 3481.1446255216983 2858.4134995727345 3059.470357613175 3025.591537645582 2747.0578680659723 3223.413203810642 3172.1041339542976 2771.8671474175226 1.11051648888909 1.2764521353524843 1.1714051387425117 1.2558843697703879 1.0312231241803362 1.1037579345978414 1.0915355522952994 0.9910496145622764 1.16290321013899 1.144392557525589 1.0 11.436642396987502 -6.763545200563397 24.999997432815768 1.072524989226699 1.2064736961572466 0.47706229731465166 0.06470213965970795 39.128053761109186 464532.2092632173 0.010163286708351055 0.019903472582421297 1.7236726850379893e-07 6.763545200563397 0.1339487069305476 KPLTTT(ph)PR ddPTM_A549_MK2206_60min_R1 1 KPLTTTPR 8 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 KPLT(0.002)T(0.016)T(0.983)PR 85.355 0.0018484000000000003 38468000.0 4088.4 4205.1 4012.3 3441.3 5072.6 3767.2 3468.7 3529.8 4884.5 5234.9 6012.1 True False 4778.421968216768 4419.121628565694 4581.304472502937 4284.418654485828 4326.427259632586 4165.842603535028 4098.917890419944 4030.1599595591315 3778.168548943698 4052.33245420405 4519.129644481204 1.0573766065888845 0.9778700714997984 1.0137581421452826 0.9480627889748621 0.9573585181199775 0.921824096952471 0.9070148928844239 0.891800031557137 0.8360389823198869 0.896706395478782 1.0 12.141829230201038 -6.262077434934879 0.918989293382128 0.9171034827034656 1.0356373759323305 0.5560015294424274 0.04049345095654908 0.7151308616705445 0.9573503773404121 0.00966785651336051 0.059560496735085934 5.469184383542551e-07 6.262077434934879 0.11853389322886487 KPLTTT(ph)PR ddPTM_A549_PD325901_60min_R1 2 KPLTTTPR 8 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 KPLT(0.021)T(0.162)T(0.817)PR;KPLT(0.003)T(0.02)T(0.977)PR 77.192 0.0027865999999999998 118628000.0 8560.7 8781.5 8325.2 8685.5 10613.0 8978.5 9222.1 10046.4 9603.2 10016.099999999999 10803.2 True False 9429.775961945743 9521.547823676927 8890.198135494498 9221.983608798311 9867.579492862367 8905.382072812192 9573.052062026756 9846.016670751664 9199.610900027577 9383.68173664168 9474.474887127195 0.9952821738709569 1.0049683953053365 0.9383314897560663 0.9733503670296346 1.0414909122055171 0.9399341049403994 1.0104045000988389 1.0392150264843993 0.9709890004064425 0.9904170783534533 1.0 13.209830270296097 KPMKT(ph)SPEMDIQNPDDGAR ddPTM_A549_MK2206_60min_R1 1 KPMKTSPEMDIQNPDDGAR 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KPMKT(0.5)S(0.5)PEMDIQNPDDGAR 43.888000000000005 0.011234000000000001 3053700.0 576.59 703.64 546.63 684.42 550.01 626.41 747.07 726.52 910.7 782.18 814.6 True False 673.9042957279386 739.4522705105624 624.1503536137078 852.1029307247816 469.1042575938414 692.6962904226942 882.8029487692875 829.5064348741854 704.4279040890627 605.4849947523974 612.3123381837278 1.1005891171928823 1.2076390175379506 1.019333295594034 1.3916148305166167 0.7661192308901082 1.131279327928301 1.4417526705209025 1.3547112856401193 1.1504388531163243 0.9888499006053315 1.0 9.258123943676798 -10.188700716448388 1.08589537210883 1.016397696286181 1.1726863980626214 0.1253431816771875 0.17913311272733437 0.767854619570265 1.8035824658981285 0.06785193731397264 0.03281441348492415 6.475887321477018e-11 10.188700716448388 0.1562887017764405 KPMKT(ph)SPEMDIQNPDDGAR ddPTM_A549_PD325901_60min_R1 1 KPMKTSPEMDIQNPDDGAR 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KPMKT(0.5)S(0.5)PEMDIQNPDDGAR 53.278 0.0024806999999999997 3091800.0 882.28 999.17 727.54 838.14 1160.0 918.94 999.26 1051.3 982.55 867.84 1171.1 True False 971.8484160997929 1083.37356248742 776.9152394534257 889.9100042459513 1078.525601782752 911.4564573135865 1037.2873861160538 1030.330996771104 941.2568404096642 813.0444342934987 1027.0621242145528 0.9462411213372466 1.0548276846601967 0.756444251166961 0.8664617098274472 1.050107463175663 0.8874404340541953 1.0099558358354621 1.003182740828897 0.9164556049902937 0.7916214755901699 1.0 10.004307733684868 -6.7288963329151 24.997133727970624 0.9663239003285422 0.9059426148507562 0.035536947964559085 0.0945543336115393 340.87244230799513 261831.2220439266 0.011176507779066413 0.023264446822217885 1.8668252531065413e-07 6.7288963329151 -0.060381285477785984 KPMS(ph)LASGLVPAAPPK ddPTM_A549_MK2206_60min_R1 2 KPMSLASGLVPAAPPK 16 1 E7EVA0;P27816-4;H7C4C5;B5MEG9;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KPMS(0.995)LAS(0.005)GLVPAAPPK;KPMS(0.989)LAS(0.011)GLVPAAPPK 81.96700000000001 9.2703e-05 6245900.0 2604.6 3043.6 2784.1 3092.1000000000004 4192.1 3382.6000000000004 3007.0 3098.3 5217.3 4375.0 5020.700000000001 True False 3044.1928036438203 3198.5062397333104 3178.927244197949 3849.664638809642 3575.447643241289 3740.5444868118434 3553.3329767615464 3537.493513145806 4035.5898803160944 3386.68446143054 3773.9216257292414 0.8066391158972692 0.8475285278652965 0.8423405569753133 1.0200701075941832 0.9474090873708589 0.9911558473578665 0.9415492236341633 0.9373521402851736 1.0693359005663745 0.8973913073184515 1.0 11.881848746989467 -5.060296435871954 0.39178395839222974 1.0277523830716364 0.5794396996407039 0.414331439572201 0.05971280524889075 2.6049367110485675 0.23811420760762528 0.012555426787358064 0.5643338260665262 8.703693002113029e-06 5.060296435871954 -0.44831268343093256 KPMS(ph)LASGLVPAAPPK ddPTM_A549_PD325901_60min_R1 2 KPMSLASGLVPAAPPK 16 1 E7EVA0;P27816-4;H7C4C5;B5MEG9;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KPMS(0.998)LAS(0.002)GLVPAAPPK;KPMS(0.994)LAS(0.006)GLVPAAPPK 121.74 3.3845e-08 10812300.0 5338.6 5466.1 5302.0 5531.0 6859.6 5635.9 5746.0 6608.2 7387.8 6693.2 6092.5 True False 5880.570741930397 5926.747430279621 5661.825603516049 5872.637308187608 6377.8053603353155 5590.003098976692 5964.66717433185 6476.394266967387 7077.316457766546 6270.590209731337 5343.161123539549 1.1005789655159872 1.1092211695000276 1.0596396913004567 1.0990941827143161 1.1936389737972886 1.0461977413238894 1.1163180440234577 1.212090393163576 1.324556062250695 1.1735731086427388 1.0 12.383477807086978 -8.022418751113888 22.566016319298406 1.1620640281037582 1.1020509206881488 0.16099946885487226 0.07901236348927818 581.1088228473901 584926.5049812656 0.019324542909576307 0.02507694671028304 9.496886526864132e-09 8.022418751113888 -0.06001310741560939 KPNAGGS(ph)PAPVR ddPTM_A549_PD325901_60min_R1 4 KPNAGGSPAPVR 12 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR 93.51 0.00011052 106590000.0 10657.400000000001 12021.7 10513.1 11171.0 12590.9 12686.8 11381.1 12515.999999999998 11702.7 12038.4 12911.800000000001 True False 11739.331402436783 13034.810849159812 11226.582186405985 11861.007298818253 11706.55862024694 12583.48290709514 11814.213988476886 12266.358561387944 11210.876216235489 11278.293369513798 11323.7304546439 1.0367017697443022 1.1511057156799587 0.9914208247337718 1.0474469828053892 1.0338076014027728 1.1112488907694382 1.0433146599345127 1.0832436016134126 0.9900338286167761 0.9959874455408404 1.0 13.467061693003524 -8.769632036088847 24.99465403261871 0.9952937467651669 1.0624404943999328 0.3540022256901717 0.040275834308399566 131.86819713829678 402310.5828870396 0.0064983232548415735 0.006974494164220247 1.6996831300581803e-09 8.769632036088847 0.06714674763476591 KPNATRPVT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 KPNATRPVTPPR 12 2 F8W0W8;P36873;P36873-2 F8W0W8 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit 1 KPNAT(0.001)RPVT(0.999)PPR;KPNAT(0.039)RPVT(0.961)PPR 102.64 7.1734e-05 45803000.0 5249.1 6060.1 5897.299999999999 4339.1 6741.0 6039.4 5105.299999999999 6452.200000000001 7489.6 7606.4 7319.700000000001 True False 6135.019751826295 6368.533205220084 6733.6258170355095 5402.179694789598 5749.407829748706 6678.485299370732 6032.866925926409 7366.819109033779 5793.217558433558 5888.108957125768 5502.016476557123 1.1150493238190506 1.1574907549541151 1.2238469015361917 0.9818545105793655 1.044963760876701 1.2138250272107114 1.096482889797063 1.3389307611894963 1.0529262467891871 1.0701729051909787 1.0 12.425744744674564 -8.980289720644793 24.927379474793096 1.0233496783892688 1.1446141415365607 0.20945480084970003 0.0911252617046802 121.77068492310144 154004.30273825084 0.015826243429030842 0.016124827367111103 1.0464302348057852e-09 8.980289720644793 0.12126446314729189 KPNATRPVT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 KPNATRPVTPPR 12 2 F8W0W8;P36873;P36873-2 F8W0W8 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit 1 KPNAT(0.01)RPVT(0.99)PPR;KPNATRPVT(1)PPR 106.52 5.015e-05 57437000.0 6853.5 6690.3 6660.5 6713.4 7952.6 6573.4 7771.400000000001 7506.1 6416.8 7883.7 8030.5 True False 7549.26227471996 7254.11506060989 7112.521582840178 7128.071470762367 7394.036810980619 6519.868409803823 8067.144879673258 7356.384947078468 6147.124211023091 7385.921836559343 7042.799409533745 1.0719121525029696 1.0300044966196382 1.0098997812165502 1.0121076941525824 1.049871845131839 0.9257495536473695 1.1454457823621769 1.0445256948707393 0.8728239800074116 1.0487196080810022 1.0 12.78193327765598 -8.737077794498342 24.978832271092525 0.9399446518720802 1.0347210267487903 0.09651509005022285 0.06532238031386603 199.84592583099135 204909.30967913102 0.010843574554881542 0.0122924708480981 1.8319862321197733e-09 8.737077794498342 0.09477637487671009 KPNIFYSGPAS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 KPNIFYSGPASPAR 14 1 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 KPNIFYS(0.066)GPAS(0.933)PAR 49.708 0.011378000000000001 4187700.0 2785.7 2698.9 3408.6 2570.8 3461.0 2673.4 1986.5 2351.0 3570.8 3548.3 3288.9 True False 3255.8580561739163 2836.262482066052 3891.990734734072 3200.6461154075982 2951.8914847589767 2956.2974135407017 2347.4213363275044 2684.2614496355395 2762.019501395876 2746.736565598624 2472.175360977733 1.3170012562888098 1.1472739866415966 1.5743182284588457 1.294667913097297 1.1940461552013522 1.1958283624230852 0.9495367413576645 1.085789257512027 1.117242548806696 1.1110605699558076 1.0 11.271565367483607 -7.188361900409329 1.6255290840794603 1.0536671729062421 1.3347847860222384 0.561772826703621 0.10785605440551381 0.20028294583597525 1.0337579750104222 0.01662761365034002 0.03296411862456814 6.480941474098737e-08 7.188361900409329 0.28111761311599626 KPNIFYSGPAS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 KPNIFYSGPASPAR 14 1 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 KPNIFYS(0.007)GPAS(0.993)PAR;KPNIFYS(0.01)GPAS(0.99)PAR 77.468 0.00030021 15659500.0 4853.6 5343.5 4872.0 4668.299999999999 5766.4 5843.1 4854.299999999999 5329.4 5165.4 5691.6 5180.9 True False 5346.333898968527 5793.815498014877 5202.643217715991 4956.6502885214595 5361.387957000052 5795.515730873632 5039.033042874887 5223.100936166579 4948.316201162365 5332.2314046654665 4543.682144431031 1.1766522677034676 1.2751366213228787 1.1450279866281177 1.090888431664742 1.1799654523746215 1.2755108184618311 1.10901970751871 1.1495304403210245 1.0890542172337638 1.17354850871356 1.0 12.149646198577658 -9.187043511100452 0.511920526153685 1.0030874078620735 1.1920607440454614 0.09019519410569599 0.07330462589523717 0.3833841914077894 0.23609326791517968 0.026410369226031693 0.018100405943455043 6.500645584051152e-10 9.187043511100452 0.18897333618338785 KPNIFYSGPAS(ph)PARPR ddPTM_A549_MK2206_60min_R1 4 KPNIFYSGPASPARPR 16 2 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 KPNIFYSGPAS(1)PARPR;KPNIFYSGPAS(1)PARPR;KPNIFYSGPAS(1)PARPR;KPNIFYSGPAS(1)PARPR 146.78 3.862e-15 537820000.0 11784.5 13313.0 14069.1 12074.5 16447.7 13671.1 12761.6 12081.8 19750.6 17863.3 18970.199999999997 True False 13773.435496636934 13990.574835579442 16064.309935471192 15032.753042044897 14028.265118136449 15117.766727858283 15080.217531173976 13794.432148960714 15277.120635227235 13827.968123399352 14259.375789114829 0.9659213488960122 0.9811491780909105 1.126578762846982 1.054236403077366 0.983792371111027 1.0601983531003316 1.0575650543332866 0.9673938293632013 1.0713737306011193 0.9697456836753822 1.0 13.799623208059222 -5.550304230613159 24.99978568480605 1.0365312213331026 0.9697280807587143 0.1890383852676868 0.04671896984152181 187.15903475279094 170605.09576055297 0.005922996529518511 0.022940641189959324 2.8164092978242295e-06 5.550304230613159 -0.0668031405743883 KPNIFYSGPAS(ph)PARPR ddPTM_A549_PD325901_60min_R1 4 KPNIFYSGPASPARPR 16 2 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 KPNIFYSGPAS(1)PARPR;KPNIFYSGPAS(1)PARPR;KPNIFYSGPAS(1)PARPR;KPNIFYSGPAS(1)PARPR 172.66 9.393799999999999e-29 1124550000.0 22413.7 21409.699999999997 23444.6 23892.2 27922.300000000003 26074.0 23848.5 26191.4 28563.4 24146.0 25936.2 True False 24689.12232390615 23213.97055634867 25035.69153983258 25367.966930876846 25961.133974705645 25861.661988807155 24756.067717899954 25668.99198024419 27362.97962989914 22621.417439217865 22746.211823118007 1.0854168824196686 1.0205642476588237 1.1006532311629873 1.115261175273776 1.1413387941951796 1.136965671027594 1.0883600271733704 1.1284952492245601 1.2029686456225164 0.9945136190205831 1.0 14.473338676989794 -5.877355805045968 7.698105201793961 1.106806928501684 1.053314446155668 0.08330540637287587 0.05905228606496057 0.4566952654906273 28.692899835816707 0.010045788521318124 0.031561513077190274 1.3263074067765061e-06 5.877355805045968 -0.05349248234601589 KPNVS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 KPNVSPEK 8 1 Q9HCH5-13;Q9HCH5;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;A0A0U1RR07 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 KPNVS(1)PEK;KPNVS(1)PEK 57.836000000000006 0.006635200000000001 31782000.0 4855.5 4931.8 5436.4 5200.1 6489.0 5192.8 5195.8 5210.6 7127.2 7044.299999999999 7036.9 True False 5674.989694422388 5182.807554579034 6207.363266534152 6474.124733441359 5534.47669592632 5742.2986492983355 6139.809604475432 5949.2185067932505 5512.900579799675 5452.9877375211745 5289.443521440062 1.0728897418829724 0.9798398515025649 1.1735380558225876 1.2239708595430405 1.0463249439176443 1.085614890493241 1.160766643899027 1.1247342906071078 1.0422458539265727 1.0309189833331631 1.0 12.368900235529118 -8.943250042663477 2.9183895013512586 1.0168327641796364 1.109016738879751 0.2628004160519972 0.0629598502021653 0.23996768849390343 3.9902751686290965 0.01208878307396522 0.012435176133777866 1.1395934839562098e-09 8.943250042663477 0.09218397470011452 KPNVS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 KPNVSPEK 8 1 Q9HCH5-13;Q9HCH5;Q9HCH5-15;Q9HCH5-14;Q9HCH5-6;A0A0U1RR07 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 KPNVS(1)PEK;KPNVS(1)PEK 59.542 0.005146899999999999 45946000.0 5826.2 5558.4 5630.6 5253.1 7079.5 5328.799999999999 5565.5 6043.5 6017.4 5658.1 6681.299999999999 True False 6417.671534978252 6026.825875206496 6012.726375548374 5577.572056344296 6582.26034294913 5285.404019558007 5777.298148058456 5922.957651465969 5764.509604072175 5300.846600382613 5859.54245625027 1.0952513072300782 1.0285488875974926 1.0261426417577544 0.9518784270254409 1.123340327695373 0.9020165070943654 0.9859640392051284 1.0108225506836384 0.9837815234060253 0.9046519655691365 1.0 12.516572300526345 -2.0000000073644446 0.6314716100275193 0.9919681762592076 8.972756316650363 0.25252973333567097 0.05672619418760823 171.03123501657254 1.0872961611336953 0.00744646489822852 1904.6479168169467 0.009999999830427398 2.0000000073644446 7.980788140391155 KPNVS(ph)PEKQR ddPTM_A549_MK2206_60min_R1 1 KPNVSPEKQR 10 2 Q9HCH5-13;A0A0U1RR07 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 KPNVS(1)PEKQR 57.106 0.0028456999999999996 9058100.0 3265.8 3313.5 2988.9 2594.0 3490.5 2820.3 3040.7 2337.2 4485.5 4814.9 4414.4 True False 3816.9871988558652 3482.142996897204 3412.7709637524695 3229.530116449085 2977.052073837391 3118.7422740363772 3593.1558305416784 2668.505257374811 3469.5414118716253 3727.21074590672 3318.1826487579738 1.1503246213057616 1.0494126952898757 1.028506060397218 0.9732828051698504 0.8971935510999459 0.9398946966357477 1.0828686093837028 0.8042068625648613 1.0456149582875753 1.1232687107510038 1.0 11.696177586026655 -5.3011421536497325 1.5848895981660551 0.9942258742986563 1.198793721438785 0.25073679200381727 0.08352122809074242 0.993279798272765 2.4545473390611843 0.01059400008329946 0.30530154574944285 4.998708900192317e-06 5.3011421536497325 0.20456784714012866 KPPAPPS(ph)PVQSQSPSTNWSPAVPVK ddPTM_A549_MK2206_60min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KPPAPPS(0.985)PVQS(0.01)QS(0.003)PS(0.001)T(0.001)NWSPAVPVK 61.498999999999995 0.00015068 5640000.0 856.57 994.36 1016.4 487.35 1073.6 942.99 426.17 827.47 999.62 1069.9 1203.8 True False 1001.1380748741408 1044.9686767450437 1160.5408034922582 606.7507718779727 915.6748621893204 1042.7765758938988 503.59957256616815 944.7664065205952 773.2076660651245 828.2088469221787 904.8632368101785 1.1063971152185939 1.1548360395641275 1.2825593485081719 0.6705441741858018 1.0119483530099587 1.1524134625801485 0.5565477213346142 1.0440985643875678 0.8545022436659424 0.9152862147895171 1.0 9.821555946074712 -6.239681678182527 24.9988886253167 0.9187982992308263 1.1786213605285325 0.3611898122246028 0.1649060374992561 687.2853443261994 789667.5748968704 0.021430265692824284 0.05664664437454363 5.758618681721703e-07 6.239681678182527 0.25982306129770616 KPPAPPS(ph)PVQSQSPSTNWSPAVPVK ddPTM_A549_PD325901_60min_R1 2 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KPPAPPS(1)PVQSQSPSTNWSPAVPVK;KPPAPPS(0.995)PVQS(0.005)QSPSTNWSPAVPVK 97.04700000000001 3.2964e-09 17248900.0 2899.6 2547.3 2589.0 2635.8999999999996 2718.8999999999996 2949.5 2309.3 2297.5 3165.4 2973.0 3556.3 True False 3193.965257427298 2761.9699107501265 2764.705108921737 2798.7135564367586 2527.933843695796 2925.480249903607 2397.181675197449 2251.674560146117 3032.3692459750146 2785.284272624645 3118.897645243118 1.024068636012686 0.885559651167979 0.8864366271007359 0.8973406231221798 0.8105215788505761 0.9379853341341587 0.7685990205076412 0.7219456411403328 0.9722567364786482 0.8930348441773029 1.0 11.606820492352295 -8.966355659149638 24.972636357585515 0.9877604246162838 0.8649379774074745 0.15952410175322662 0.08224561316136503 141.94315537758476 105358.56175619704 0.013372031673415342 0.014157677910447166 1.080548689227467e-09 8.966355659149638 -0.1228224472088093 KPPEADMNIFEDIGDYVPS(ph)TTKTPR ddPTM_A549_MK2206_60min_R1 1 KPPEADMNIFEDIGDYVPSTTKTPR 25 2 Q13123 Q13123 IK Protein Red 1 KPPEADMNIFEDIGDYVPS(0.25)T(0.25)T(0.25)KT(0.25)PR 88.84200000000001 1.0872e-08 6885500.0 1287.5 1540.6 1552.9 1425.4 1634.9 1262.5 1502.1 1287.2 2017.0 1944.1 2205.1 True False 1504.7985236471698 1619.0099595653633 1773.1245707822986 1774.6230639886383 1394.4083757389335 1396.096912020325 1775.0121265026662 1469.6645418846726 1560.1527204871416 1504.9264597639112 1657.5128123360385 0.9078653947334266 0.9767707057923669 1.069750144666044 1.0706542059771766 0.8412655186500217 0.8422842355304129 1.0708889326780096 0.88666858617725 0.9412613337741377 0.907942580330901 1.0 10.694804306868562 -6.693290353076443 24.999985285376827 0.9551059791822999 1.0086881490079591 0.13482846343523636 0.0780221264099557 103.9346621271508 38125.93832880692 0.011188505706878352 0.023290729334031247 2.0263275396193065e-07 6.693290353076443 0.05358216982565922 KPPEADMNIFEDIGDYVPS(ph)TTKTPR ddPTM_A549_PD325901_60min_R1 3 KPPEADMNIFEDIGDYVPSTTKTPR 25 2 Q13123 Q13123 IK Protein Red 1 KPPEADMNIFEDIGDY(0.008)VPS(0.261)T(0.261)T(0.261)KT(0.209)PR;KPPEADMNIFEDIGDYVPS(0.262)T(0.262)T(0.262)KT(0.214)PR;KPPEADMNIFEDIGDY(0.037)VPS(0.254)T(0.254)T(0.254)KT(0.2)PR 79.458 1.5694e-06 24932100.0 5642.629999999999 6795.629999999999 7088.09 6759.639999999999 7664.7 7387.58 7256.620000000001 7253.85 7563.3 7918.0 7831.5 True False 6215.465643715342 7368.321589365561 7569.130411547733 7177.167610543706 7126.357913779533 7327.4179978243465 7532.77464507483 7109.166271214758 7245.440803084237 7418.05612870567 6868.275147968811 0.9049529190095816 1.0728052430375667 1.1020423976150968 1.0449738043278953 1.0375760668072602 1.0668498043488137 1.0967491084428285 1.0350730158673371 1.054914173790339 1.080046440902917 1.0 12.745732120545359 -10.664659404090028 0.8578595676714833 0.99896871769688 1.0502812058608544 0.0 0.0549749627314234 1.0789262937676172 1.3682103590120995 0.03563030189583721 0.008740404478678885 2.1644153032962542e-11 10.664659404090028 0.05131248816397438 KPPEADMNIFEDIGDYVPSTTKT(ph)PR ddPTM_A549_MK2206_60min_R1 1 KPPEADMNIFEDIGDYVPSTTKTPR 25 2 Q13123 Q13123 IK Protein Red 1 KPPEADMNIFEDIGDYVPS(0.143)T(0.143)T(0.143)KT(0.571)PR 71.118 3.7182e-05 6119500.0 2656.1 2722.5 2332.9 2496.1 3302.7 2329.4 2686.4 2276.0 3171.3 3574.8 3182.3 True False 3104.384744589705 2861.0636212623 2663.740299554397 3107.6446120541887 2816.8772050602347 2575.895561869423 3174.484106675163 2598.6299699576707 2453.0056135254695 2767.2501971935744 2392.0470829880637 1.2977941641147854 1.1960732886947847 1.1135818849464048 1.2991569581365534 1.1776010702688542 1.0768582191332547 1.327099340665864 1.0863623832652787 1.0254838338973071 1.156854401769057 1.0 11.22403007124028 -8.499821726189968 5.050441423647604 1.0135143808633742 1.2056071653208136 0.3731165191690896 0.08476518453083942 0.09151812704108656 6.4213981221617775 0.011483006400443044 0.013584928513375717 3.1635760119400352e-09 8.499821726189968 0.19209278445743938 KPPEADMNIFEDIGDYVPSTTKT(ph)PR ddPTM_A549_PD325901_60min_R1 1 KPPEADMNIFEDIGDYVPSTTKTPR 25 2 Q13123 Q13123 IK Protein Red 1 KPPEADMNIFEDIGDY(0.001)VPS(0.161)T(0.161)T(0.161)KT(0.517)PR 59.536 0.00036056 3991700.0 858.03 752.65 910.91 804.38 682.58 904.29 1119.7 1170.4 834.26 888.59 1016.2 True False 945.1365739516986 816.0784569254046 972.7298303468134 854.0647257204746 634.6379355731644 896.9257620563936 1162.3107962233494 1147.0554538389629 799.1989534172982 832.4842757522819 891.2138422225503 1.0605048184559984 0.9156932020829371 1.0914662500315018 0.9583162707511012 0.7121051149637387 1.006409146226453 1.3041884463157853 1.2870709581646342 0.8967532993251304 0.9341015997644225 1.0 9.799627830386624 KPPLS(ph)PAQTNPVVQR ddPTM_A549_MK2206_60min_R1 2 KPPLSPAQTNPVVQR 15 1 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 KPPLS(1)PAQTNPVVQR;KPPLS(1)PAQTNPVVQR 142.88 7.0554e-14 44772000.0 4574.3 5548.3 5041.4 4667.4 6225.3 5010.0 4669.2 4004.1 7619.8 6673.3 7682.299999999999 True False 5346.3300091023275 5830.684771294628 5756.346326963663 5810.913209527546 5309.566616605044 5540.1548746311555 5517.533200896245 4571.693437041965 5893.927466320237 5165.796895191864 5774.572889306227 0.9258399039352416 1.009717061861374 0.996843651869679 1.0062931615753985 0.9194734776727271 0.9594051336490732 0.9554876709780585 0.7916937797266632 1.0206689878718198 0.8945764464690127 1.0 12.495498527594727 KPPLS(ph)PAQTNPVVQR ddPTM_A549_PD325901_60min_R1 2 KPPLSPAQTNPVVQR 15 1 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 KPPLS(1)PAQTNPVVQR;KPPLS(1)PAQTNPVVQR 145.17 5.6016999999999995e-14 67307000.0 6479.1 5470.6 6261.7 6023.2 7121.299999999999 6970.8 6541.5 7145.299999999999 7909.6 7460.6 7362.200000000001 True False 7136.853462338671 5931.62666107237 6686.656616660964 6395.239384320302 6621.124455151297 6914.032115961379 6790.44036214615 7002.781386120587 7577.187018374929 6989.536442766034 6456.696072831005 1.1053413978040079 0.9186783138255393 1.0356158228970394 0.9904817126565233 1.0254663345564905 1.0708312793372432 1.051689639027536 1.0845765864042203 1.1735393664042535 1.0825252364250435 1.0 12.65658040334729 -7.302853882079267 1.6974695695494562 1.082634410807245 1.0065877853573253 0.23250190373831792 0.05609581573112742 0.481904104040803 2.7098106051559867 0.011275560376540865 0.021034519804014273 4.9790457627116573e-08 7.302853882079267 -0.07604662544991969 KPPNLEGIVFPGESGLAPGS(ph)YKK ddPTM_A549_MK2206_60min_R1 1 KPPNLEGIVFPGESGLAPGSYKK 23 2 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 KPPNLEGIVFPGES(0.003)GLAPGS(0.994)Y(0.004)KK 83.21600000000001 7.163e-06 3743200.0 880.5 899.24 1315.9 1156.7 1851.9 1425.3 1378.2 1194.7 1410.0 1709.6 1879.7 True False 1029.1068738418114 945.0074750354127 1502.5144070400054 1440.091551926236 1579.4879631970953 1576.1242999624305 1628.6011002902426 1364.052383615303 1090.6372513073215 1323.4001726312345 1412.9186129191658 0.7283553804388077 0.6688336231079697 1.0634118577684597 1.0192317793527608 1.1178902654086977 1.115509616442856 1.1526503263521068 0.965414689241794 0.7719038034710339 0.9366428897818952 1.0 10.46446265046163 -5.751274560413059 24.993703767942566 0.9594548463601328 0.6985943707974854 0.49235041680274116 0.112938599604191 185.01109814113804 454903.8072254506 0.02035614958267168 0.07704401299236309 1.7730681950566146e-06 5.751274560413059 -0.26086047556264735 KPPNLEGIVFPGESGLAPGS(ph)YKK ddPTM_A549_PD325901_60min_R1 2 KPPNLEGIVFPGESGLAPGSYKK 23 2 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 KPPNLEGIVFPGESGLAPGS(1)YKK;KPPNLEGIVFPGES(0.041)GLAPGS(0.955)Y(0.004)KK 119.89 4.728200000000001e-16 13258100.0 4246.299999999999 4170.7 4951.299999999999 4739.1 5212.1 4579.1 4754.2 5267.3 5130.9 5841.200000000001 5291.8 True False 4677.3812500391605 4522.179526072923 5287.32499258563 5031.823443722992 4846.020076768866 4541.809327795766 4935.123682598065 5162.239569383086 4915.266116185384 5472.38563513457 4640.942147484053 1.0078516605889738 0.9744098035189873 1.1392783673142735 1.0842245569578677 1.0441888570828208 0.9786395053982673 1.0633883219754192 1.1123257746666027 1.05910954284359 1.1791540297698517 1.0 12.180201998102518 -10.658575654547727 1.040166079473379 1.0013911907783795 1.0523064039921826 0.0 0.07189249961902071 0.8430604633792944 1.6879091631700553 0.029432982389070172 0.008765274711276964 2.1949485535267695e-11 10.658575654547727 0.0509152132138031 KPPPT(ph)PQR ddPTM_A549_PD325901_60min_R1 1 KPPPTPQR 8 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 KPPPT(1)PQR 46.706 0.024133 13493000.0 1597.0 1668.8 1880.7 1858.2 1875.9 2080.2 2224.1 2009.1 1956.6 2356.2 2625.4 True False 1759.1262643507373 1809.4356326541103 2008.3356115678296 1972.9767937216063 1744.143255503677 2063.2595408881125 2308.739342574219 1969.0269243915407 1874.3709062597825 2207.429129888393 2302.492443781819 0.7640095710635173 0.7858595312834694 0.8722441704386921 0.8568874130509689 0.7575022711644345 0.8960982896861241 1.0027131028417793 0.8551719375710242 0.814061697063009 0.958712866072522 1.0 11.168980706413492 -14.999999999999993 0.2357051587223056 1.893308475645652 0.8237431619537002 0.4088766608305543 0.06455763584556881 32.573498424617 0.41130232149922524 13.591859520839334 0.04009315898923715 1.0000000000000164e-15 14.999999999999993 -1.0695653136919518 KPPT(ph)PGPEK ddPTM_A549_MK2206_60min_R1 2 KPPTPGPEK 9 1 Q6ZRI6;Q6ZRI6-3 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 1 KPPT(1)PGPEK;KPPT(1)PGPEK 54.7 0.011866 8447900.0 2984.3 3337.6 3063.3 2748.5 3973.0 3516.2 3405.5 2881.5 4280.7 4903.3 5335.4 True False 3487.976880870094 3507.4695839577817 3497.7220024968847 3421.8826233848545 3388.5769630012737 3888.281950135339 4024.235268493995 3289.96144922365 3311.12828487323 3795.6411245102527 4010.472930451092 0.8697170985462235 0.8745775485294864 0.8721470168615416 0.8532366837344458 0.8449320122003995 0.9695320271611934 1.0034315997842567 0.8203425147800711 0.825620404948301 0.9464323012107514 1.0 11.969556659543155 -7.23667274783601 24.526037084534842 0.9180179176223975 0.8635440172656954 0.23034192147091037 0.057399662017051635 1140.0362175039904 1128960.9376248452 0.011178678528833186 0.019356388916567317 5.798654755299227e-08 7.23667274783601 -0.054473900356702076 KPPT(ph)PGPEK ddPTM_A549_PD325901_60min_R1 2 KPPTPGPEK 9 1 Q6ZRI6;Q6ZRI6-3 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 1 KPPT(1)PGPEK;KPPT(1)PGPEK 62.14 0.0045169 14130000.0 4074.7 3810.8 4404.6 4526.700000000001 5183.5 4760.200000000001 4237.6 4701.9 4970.5 4329.700000000001 5198.5 True False 4488.360544364402 4131.949490003762 4703.522643011463 4806.303978118394 4819.4288421042165 4721.434509439283 4398.864186903699 4608.116915930809 4761.60717037936 4056.322003088774 4559.117456006622 0.9844801296906711 0.9063046806482101 1.0316739343520505 1.0542180640216023 1.057096880834828 1.035602735616914 0.9648499362761997 1.0107475756869635 1.044414235063402 0.8897164949643014 1.0 12.15453886232615 -5.775859564300852 24.98109079166137 1.023075651744789 0.9453924031227018 0.15812178894353046 0.050207351681300985 126.46464190700107 219084.68169376513 0.004343934630752258 0.013594388363697191 1.6754845817560573e-06 5.775859564300852 -0.0776832486220872 KPPT(ph)PPEKPQR ddPTM_A549_MK2206_60min_R1 2 KPPTPPEKPQR 11 2 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 KPPT(1)PPEKPQR;KPPT(1)PPEKPQR 53.754 0.006986399999999999 24457000.0 7103.299999999999 8062.5 8017.1 7336.299999999999 10971.7 9066.8 7712.0 7687.4 11548.099999999999 12354.8 10628.6 True False 8302.163380988692 8472.846812278163 9154.04533222922 9133.693829339021 9357.777464123103 10026.242757945256 9113.170574255078 8777.112491675129 8932.4737885263 9563.84209921874 7989.225285562938 1.0391700176475502 1.0605342207071269 1.1457988734866682 1.1432515047290273 1.1712997355367147 1.2549705884578501 1.1406826379928459 1.0986187243381351 1.118065077557379 1.1970925537049557 1.0 12.96383989659316 -10.297988656085332 0.6706543028940588 0.9980461680679885 1.1356594775505198 0.0 0.07867852080258746 0.5828528993698945 0.4759711915361332 0.04204999738202802 0.012478664382947608 5.0351376056112636e-11 10.297988656085332 0.13761330948253125 KPPTSPSS(ph)PPAPVPR ddPTM_A549_MK2206_60min_R1 1 KPPTSPSSPPAPVPR 15 1 O75161;O75161-2 O75161 NPHP4 Nephrocystin-4 1 KPPT(0.001)S(0.003)PS(0.253)S(0.743)PPAPVPR 62.203 0.0020656999999999997 7811000.0 3532.0 3160.7 3417.9 3025.6 4646.0 3389.1 3675.3 3482.0 5049.4 5534.5 5711.8 True False 4128.115250890718 3321.56612955877 3902.609614577125 3766.872135824347 3962.579554518985 3747.7323124974914 4343.054436146226 3975.584163177771 3905.7189622348847 4284.252606122813 4293.402422339574 0.9615020547366285 0.7736442575883145 0.9089782952259349 0.8773629316051142 0.922946224164956 0.8729049699597612 1.0115647239467471 0.9259751991781343 0.909702510510666 0.997868865921081 1.0 12.067905688173223 -14.999999966058631 0.08513600205817011 1.3167070730607957 0.8127052766079564 0.34763204905929346 0.05342887822671868 113.40373656206448 0.7091628429137798 6.712586681901377 0.6024516811226894 1.000000078152893e-15 14.999999966058631 -0.5040017964528393 KPPTSPSS(ph)PPAPVPR ddPTM_A549_PD325901_60min_R1 1 KPPTSPSSPPAPVPR 15 1 O75161;O75161-2 O75161 NPHP4 Nephrocystin-4 1 KPPT(0.043)S(0.123)PS(0.222)S(0.611)PPAPVPR 40.614000000000004 0.042789 10479000.0 3240.0 2896.6 3364.8 3986.5 4350.3 4514.6 3890.2 3695.0 4317.5 4545.0 4789.7 True False 3568.9224148380663 3140.706647618583 3593.15556218612 4232.737051001608 4044.7499357202655 4477.834594410858 4038.2436897991233 3621.300326328574 4136.050489510687 4258.027924345447 4200.597264409911 0.8496226108311336 0.7476809724723232 0.8553915874367635 1.007651242089787 0.9628987691797827 1.0659995025826148 0.9613498832686607 0.8620917689516433 0.9846339054100461 1.013672022410271 1.0 12.036378757587013 -6.120421211199535 3.8605960655356752 0.9848390954859639 0.7986287066807661 0.6705975442737921 0.05213289050852622 0.09533700274394286 2.4803347530450117 0.007092720520201466 0.020462974235068123 7.578422065502557e-07 6.120421211199535 -0.1862103888051978 KPPVS(ph)PPLLLVQDSETTGR ddPTM_A549_PD325901_60min_R1 1 KPPVSPPLLLVQDSETTGR 19 1 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 KPPVS(1)PPLLLVQDSETTGR 48.336999999999996 0.007846200000000001 3481500.0 1570.8 1520.8 1465.1 1961.3 1855.0 1797.2 1805.1 1836.7 1952.6 1777.2 1743.7 True False 1730.2664596381587 1648.9631532480648 1564.5304963620065 2082.4450465645164 1724.7111994025906 1782.5641990597617 1873.794068288622 1800.065577636724 1870.5390123494076 1664.9872887011506 1529.2359542250165 1.1314581342779244 1.0782921685121662 1.0230798537266124 1.3617552221493865 1.1278254311491367 1.1656567412862893 1.2253138981670229 1.1771012659383606 1.2231853476773347 1.0887706923847014 1.0 10.578595309887353 -10.86739531721786 1.0926866353305147 0.9991433963583065 1.171446378365723 0.21181681498065918 0.08672932594166717 0.4501175565632153 0.9463717105476342 0.0594428620099757 0.014108886535524105 1.3570776022402484e-11 10.86739531721786 0.17230298200741645 KPQEEDS(ph)PGPSTSSVLK ddPTM_A549_PD325901_60min_R1 2 KPQEEDSPGPSTSSVLK 17 1 A0A182DWI4;E9PN30;Q9BQE4 A0A182DWI4 VIMP Selenoprotein S 1 KPQEEDS(0.999)PGPS(0.001)TSSVLK;KPQEEDS(0.959)PGPS(0.039)T(0.001)SS(0.001)VLK 111.38 1.9105e-09 55537000.0 9612.3 10118.7 10433.5 9413.0 13577.7 11856.0 10989.099999999999 11674.8 11365.8 10940.099999999999 12144.5 True False 10588.133619798746 10971.438360580734 11141.580051732304 9994.419631525925 12624.049192522134 11759.448666844273 11407.29621396625 11441.936955296576 10888.134951634183 10249.340218950852 10650.80349032845 0.9941159490374025 1.0301042893659094 1.0460788298131223 0.9383723622918628 1.185267309080062 1.1040902855378505 1.0710268219974897 1.074279228387466 1.022282963113651 0.9623067619506689 1.0 13.378674650168337 -4.212045715703447 16.09770537805057 1.0320634954206485 1.047827165208346 0.0 0.0663103016454371 0.0 0.0 0.008414397334786562 0.0 6.13697401338925e-05 4.212045715703447 0.0157636697876975 KPQRHS(ph)LPATGVLK ddPTM_A549_MK2206_60min_R1 2 KPQRHSLPATGVLK 14 2 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 KPQRHS(0.999)LPAT(0.001)GVLK;KPQRHS(1)LPATGVLK 122.31 3.373e-07 26122000.0 3535.1000000000004 3782.8 3946.8999999999996 3244.3 5616.6 3953.7 3396.6000000000004 4339.0 5398.2 5389.0 5798.9 True False 4131.738455102996 3975.3283623548305 4506.62976909051 4039.1536456421636 4790.40558026503 4372.077909746346 4013.7182536974583 4954.0665376301995 4175.516319154033 4171.621157176954 4358.873088501866 0.9478914323066618 0.912008283251289 1.033897908378752 0.9266508943095682 1.0990009305160755 1.0030294117255474 0.9208155805878174 1.1365475518657278 0.9579348226881155 0.9570412059440643 1.0 12.089739483936832 -5.749679571655696 24.989729095621204 0.9948116343378605 0.9299498413349566 0.15101953400747914 0.0647500667174772 317.8804704977311 675486.522419061 0.008115319433810013 0.030915543307542218 1.7795919327849129e-06 5.749679571655696 -0.06486179300290384 KPQRHS(ph)LPATGVLK ddPTM_A549_PD325901_60min_R1 2 KPQRHSLPATGVLK 14 2 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 KPQRHS(1)LPATGVLK;KPQRHS(1)LPATGVLK 131.48 1.7856e-09 36926000.0 8531.5 9000.2 8927.6 8433.5 12215.8 11978.4 10284.8 11851.400000000001 11412.5 13005.199999999999 14038.6 True False 9397.611599441649 9758.67844020465 9533.480622019968 8954.418141131835 11357.804350222195 11880.851881825856 10676.193692058501 11615.01452975656 10932.87231303781 12184.04945251868 12311.941198017614 0.7632924368542947 0.7926189934838161 0.7743279852209646 0.7272953953494852 0.9225031347656982 0.964986080646554 0.8671413809040536 0.9433942497732796 0.8879893216837444 0.9896123817160916 1.0 13.587770626015429 -2.0000000000161284 0.12595463828359232 1.029387123772694 0.08321050355531821 0.6948733139563231 0.05139722370067912 35.763801591372 0.29514153234499657 0.17064032160630188 6.020231013236215 0.009999999999628629 2.0000000000161284 -0.9461766202173757 KPQS(ph)SSTEPAR ddPTM_A549_PD325901_60min_R1 1 KPQSSSTEPAR 11 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KPQS(0.354)S(0.354)S(0.252)T(0.041)EPAR 41.227 0.038221 10134000.0 1408.2 1897.5 1851.1 1534.1 2182.1 2259.7 1738.1 1783.9 2309.3 2257.9 1952.3 True False 1551.1594273379508 2057.4089842768285 1976.7267775685684 1628.8578728061113 2028.8368238363291 2241.297752401147 1804.2443466248142 1748.3187150575227 2212.2481518070726 2115.335808664376 1712.179476649366 0.9059560919241235 1.2016316118349089 1.1545090947106234 0.9513359405485281 1.1849440152189201 1.3090320161921543 1.0537705720872286 1.0211071554711537 1.2920655702148185 1.2354638269604559 1.0 10.741618222674829 -5.2501531294351915 23.644592997956565 1.133763597552606 0.9059558019260255 0.2558479227100682 0.11443150674519971 965.6342850377557 2022910.6624260093 0.01750086608279934 0.3515278008219429 5.6214308221515735e-06 5.2501531294351915 -0.22780779562658038 KPQSS(ph)STEPAR ddPTM_A549_PD325901_60min_R1 1 KPQSSSTEPAR 11 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KPQS(0.032)S(0.428)S(0.428)T(0.112)EPAR 58.831 0.0044432 13235000.0 2826.4 2167.7 2427.7 2264.5 2866.4 2510.6 2543.2 2838.2 3053.7 2530.9 2758.0 True False 3113.3340473142925 2350.3796865438126 2592.45832094604 2404.3730219473564 2665.0739525431727 2490.1545059867763 2639.9828676924376 2781.589874475172 2925.3636085278017 2371.0985420739034 2418.783484402476 1.2871487123137004 0.9717197515611606 1.0718025559805193 0.9940422685419983 1.1018241069235426 1.0295069906192664 1.0914506753979287 1.1499953974434889 1.2094359116440174 0.9802855680816126 1.0 11.240065917990256 -7.991253478818701 23.239487745265468 1.106220923434233 1.0678533100572787 0.0 0.09776241741892458 298.54699524716847 793226.4069877996 0.016031136569733435 0.02212489876052271 1.0203437795517714e-08 7.991253478818701 -0.03836761337695438 KPQSSST(ph)EPAR ddPTM_A549_MK2206_60min_R1 1 KPQSSSTEPAR 11 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KPQS(0.232)S(0.232)S(0.232)T(0.303)EPAR 42.788999999999994 0.045854 4717400.0 999.5 1085.5 651.73 745.67 748.92 780.62 833.3 825.19 1087.2 1337.9 1566.0 True False 1168.191164571142 1140.7473134546292 744.1551139905637 928.3591834743982 638.7548600883249 863.2246902663813 984.699823590088 942.1632095383878 840.9509359016456 1035.667460788096 1177.1189805987203 0.9924155364285798 0.9691011123399002 0.6321834294202465 0.7886706431343117 0.5426425625754788 0.7333368202314754 0.8365338082385166 0.8003976021686214 0.7144145577143877 0.8798324365318809 1.0 10.201044436851786 -10.842070587108005 0.9765562369533921 1.0064111594718328 0.7705852182716729 0.1665336676681619 0.1287838628362078 0.5963702218094664 0.9635719312525747 0.1020873113038381 0.022410555374881874 1.4385647452649813e-11 10.842070587108005 -0.23582594120015987 KPRPLS(ph)MDLTAR ddPTM_A549_MK2206_60min_R1 2 KPRPLSMDLTAR 12 2 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KPRPLS(1)MDLTAR;KPRPLS(1)MDLTAR 73.166 0.00049855 13499900.0 4373.8 4575.0 4946.0 4824.6 6335.2 4216.9 4355.6 4279.5 6871.9 5972.6 6680.1 True False 5111.99051085669 4807.8479585950545 5647.417172444614 6006.627216584521 5403.30047218869 4663.129559048326 5146.956140200393 4886.132230419092 5315.4256221693495 4623.385511849153 5021.246808619101 1.0180719462110137 0.9575008243654262 1.124704159682148 1.1962421775950127 1.0760874097871038 0.9286796161949145 1.0250354814994371 0.9730914286132915 1.0585868061783545 0.9207644411967544 1.0 12.293829923991657 -7.061974279223482 24.999971490288022 1.0167575073930128 1.0777563923968605 0.2226474621347283 0.07086783357658101 332.18643257723255 134001.24805156482 0.010153444911403903 0.01758631183105946 8.670132224686112e-08 7.061974279223482 0.06099888500384765 KPRPLS(ph)MDLTAR ddPTM_A549_PD325901_60min_R1 5 KPRPLSMDLTAR 12 2 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KPRPLS(1)MDLTAR;KPRPLS(0.988)MDLT(0.012)AR;KPRPLS(1)MDLTAR;KPRPLS(1)MDLTAR;KPRPLS(0.984)MDLT(0.016)AR 90.75399999999999 5.5789e-05 57238100.0 13760.600000000002 13210.1 14561.5 14327.3 15291.6 15511.0 14830.6 15835.7 15640.5 15543.1 16995.0 True False 15157.565981981685 14323.361487849988 15549.73095541284 15212.264781340862 14217.570769156146 15384.683558655654 15394.986598615713 15519.844540633669 14983.184176303854 14561.706013397963 14904.722740181316 1.0169639681467362 0.9609948294600578 1.0432754252779666 1.0206338652869034 0.9538970309610193 1.032201928666571 1.032893188755045 1.041270261190036 1.005264199642642 0.9769860377302677 1.0 13.86348191790531 -5.750481813288979 24.999968100340592 1.0091361175715245 0.9889794300026626 0.07917086528578965 0.028882904426922245 441.95801806105914 1008317.84690686 0.0036094785806436622 0.013671880117326361 1.7763076521889869e-06 5.750481813288979 -0.02015668756886191 KPRPPS(ph)LK ddPTM_A549_PD325901_60min_R1 1 KPRPPSLK 8 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KPRPPS(1)LK 48.74100000000001 0.007156 4318700.0 1545.7 1157.1 1443.1 1540.0 2145.3 1489.9 1434.7 1252.4 1783.0 2042.0 1439.3 True False 1702.6183261158012 1254.6128778428035 1541.0374440652606 1635.1223024062394 1994.6215288832216 1477.76674837477 1489.2982935979635 1227.419899511206 1708.0667105495202 1913.0677715101 1262.2752244744322 1.348848724195401 0.9939297337988876 1.220841076641503 1.2953770070921322 1.5801795759032766 1.1707167499782474 1.179852273673561 0.9723869055754154 1.353165044699899 1.5155710374547162 1.0 10.301810792204055 -7.489196917908178 24.994472489632265 1.1551443781833102 1.2789286069844203 0.024447124299358913 0.19252158105477923 1242.742196221009 922210.0007303603 0.027662270363990642 0.04420505843016119 3.241925885376758e-08 7.489196917908178 0.12378422880111017 KPRPS(ph)EGDEDCLPASK ddPTM_A549_MK2206_60min_R1 4 KPRPSEGDEDCLPASK 16 2 P78346;P78346-2;Q5VU10 P78346 RPP30 Ribonuclease P protein subunit p30 1 KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK 113.99 4.0415e-08 290595000.0 17436.4 17184.9 14549.1 12856.0 18861.800000000003 14813.6 13939.939999999999 13241.490000000002 19488.2 18968.200000000004 18605.0 True False 20379.23804094875 18059.538007357398 16612.381153177113 16005.720577127775 16087.254206075371 16381.165319528143 16472.64665649395 15118.511757862401 15074.153816260536 14683.270446012963 13984.865028122087 1.4572352325151692 1.291363053632736 1.1878828376084696 1.1445030427495697 1.1503331761676356 1.1713495472846789 1.1778910002612966 1.0810624004922944 1.0778905470984528 1.049940089982024 1.0 13.77157870957388 -2.0000000000000004 0.22678983712565548 1.0129262495773124 3.1760005084472027 0.864902436742891 0.04401928391761846 11.584226712269539 0.13614252564723062 0.027761588433840148 9.397324256990697 0.00999999999999999 2.0000000000000004 2.1630742588698904 KPRPS(ph)EGDEDCLPASK ddPTM_A549_PD325901_60min_R1 8 KPRPSEGDEDCLPASK 16 2 P78346;P78346-2;Q5VU10 P78346 RPP30 Ribonuclease P protein subunit p30 1 KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK 132.36 1.2236999999999999e-10 319315000.0 43725.4 48827.2 50470.7 45199.5 45256.1 45046.3 48716.8 57795.600000000006 45526.1 60006.1 65404.4 True False 48164.37041906181 52942.03950307333 53895.945206974204 47991.37045948756 42077.4676610693 44679.45786785317 50570.74448285588 56642.821418228945 43612.79633827739 56217.304605294936 57360.07343265161 0.8396846017921022 0.9229771918830326 0.9396073258214225 0.8366685673064181 0.733567186075413 0.7789295793059404 0.8816366761146617 0.9874956224513064 0.760333690811687 0.980077277468997 1.0 15.807759250535824 -11.047316014624103 1.3312945486037249 1.0004836336096334 0.84531153392317 0.3292172482219703 0.07441983193438935 0.42236030643547945 1.3277765281938512 0.05902331318024977 0.012993107251720705 8.967760174591046e-12 11.047316014624103 -0.1551720996864634 KPRPS(ph)EGDEDCLPASKK ddPTM_A549_MK2206_60min_R1 2 KPRPSEGDEDCLPASKK 17 3 P78346;P78346-2;Q5VU10 P78346 RPP30 Ribonuclease P protein subunit p30 1 KPRPS(1)EGDEDCLPASKK;KPRPS(1)EGDEDCLPASKK 82.586 5.3628e-05 15134400.0 2255.3 2051.11 2283.0 1579.3600000000001 2764.7 1607.24 1965.45 1492.62 3108.6 2769.8 3035.0 True False 2635.9395032089005 2155.5027380008514 2606.76372921372 1966.303270900164 2358.016292375943 1777.317070000433 2322.5468238031185 1704.2034559570372 2404.507063414143 2144.100256290355 2281.3257382612496 1.1554419691148208 0.9448465433277861 1.1426530133309716 0.8619125440625655 1.0336166610618018 0.779072028247507 1.0180689170557846 0.7470232888600662 1.0539955005490702 0.9398483611220363 1.0 11.15565674070379 -2.803140210505806 1.3847912994594036 0.9847236955773632 181.92554151263508 0.14194703482809645 0.1178021560488725 2300.640653077811 5.075037746503172 0.0162696151101398 1321736.0267088192 0.001573474791436866 2.803140210505806 180.9408178170577 KPRPS(ph)EGDEDCLPASKK ddPTM_A549_PD325901_60min_R1 2 KPRPSEGDEDCLPASKK 17 3 P78346;P78346-2;Q5VU10 P78346 RPP30 Ribonuclease P protein subunit p30 1 KPRPS(1)EGDEDCLPASKK;KPRPS(1)EGDEDCLPASKK 94.837 9.746600000000001e-07 21024400.0 2601.1000000000004 1889.81 2816.8 2240.39 2461.6000000000004 3066.5 2804.0 3311.3 3289.2 3602.2 4065.2 True False 2865.1617571713873 2049.0709209887705 3007.964986794417 2378.7738020051393 2288.7057080589852 3041.5274406948365 2910.7077544076756 3245.2535238354017 3150.9663625011126 3374.7564772447035 3565.2061714260135 0.8036454609931796 0.5747412134006213 0.843700151453314 0.6672191417905226 0.6419560603261122 0.8531140401000384 0.8164205979828226 0.9102569017873553 0.8838104196484062 0.9465810152277578 1.0 11.79976979299839 -8.227205029429488 0.46660502266281073 0.9803168494119842 0.687782666610811 0.6053038686310936 0.07974096646835846 0.3943273233945366 0.1972115592880686 0.02692489287653387 0.039432257269462694 5.926454719573605e-09 8.227205029429488 -0.29253418280117316 KPRPVS(ph)QLVAQQVTQQFVPPTQSK ddPTM_A549_MK2206_60min_R1 2 KPRPVSQLVAQQVTQQFVPPTQSK 24 2 Q8IY57;Q8IY57-5;Q8IY57-3 Q8IY57 YAF2 YY1-associated factor 2 1 KPRPVS(1)QLVAQQVTQQFVPPTQSK;KPRPVS(1)QLVAQQVTQQFVPPTQSK 114.98 2.1495000000000002e-16 6503500.0 2484.2 3037.5 2756.1 3011.7 3929.2 2984.3 2749.5 2564.17 4504.9 3636.8 3645.5 True False 2903.472227141203 3192.0957757885176 3146.956423165103 3749.5666352003495 3351.2198849797655 3300.0966451819854 3249.048559895534 2927.648949941283 3484.547342847058 2815.2443541327034 2740.2217393184114 1.059575648744177 1.1649041863971574 1.14843130320828 1.368344240686521 1.222973979402605 1.2043173725068084 1.1856881920452487 1.0683985561947593 1.2716296980089599 1.0273783007184494 1.0 11.420076925757165 -10.946735551748862 1.1180264961477964 0.9961852875969291 1.1969729153257094 0.39493425630144097 0.08263660416642672 0.4055943614017994 0.8720647044151244 0.06534616707549583 0.014092513649043516 1.130484073395007e-11 10.946735551748862 0.20078762772878023 KPRPVS(ph)QLVAQQVTQQFVPPTQSK ddPTM_A549_PD325901_60min_R1 2 KPRPVSQLVAQQVTQQFVPPTQSK 24 2 Q8IY57;Q8IY57-5;Q8IY57-3 Q8IY57 YAF2 YY1-associated factor 2 1 KPRPVS(1)QLVAQQVTQQFVPPTQSK;KPRPVS(1)QLVAQQVTQQFVPPTQSK 153.81 4.1694999999999995e-30 12831600.0 3756.4 4634.2 4501.5 4454.700000000001 5048.9 4900.3 4768.2 4361.5 4362.1 4187.2 4730.200000000001 True False 4137.746962684479 5024.740297726313 4806.998859718501 4729.856701642256 4694.282681759424 4860.393581489287 4949.656460259156 4274.506460969441 4178.776106611367 3922.819477407976 4148.415387208336 0.9974283133370024 1.211243288996596 1.1587554309389825 1.1401598586840647 1.131584531345215 1.1716265435897137 1.1931438870662403 1.0303949971234576 1.007318630505674 0.9456187751843785 1.0 12.018344645317866 -8.383358913919848 4.985138618375974 1.0042136154280008 1.1468378633085832 0.6255774521365745 0.05500236591455891 0.10193855224155089 3.7672705492326384 0.007883448960426566 0.00954925233455227 4.136576744731955e-09 8.383358913919848 0.14262424788058237 KPRS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 KPRSPPR 7 2 A0A087WZG9;B4DSP0;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7-2;Q86TG7 A0A087WZG9 PEG10 Retrotransposon-derived protein PEG10 1 KPRS(1)PPR;KPRS(1)PPR 70.256 0.0070265 569610000.0 6285.4 6770.7 4609.0 3960.1 5679.3 4734.4 4303.4 4611.6 5194.4 9889.099999999999 9530.400000000001 True False 7346.221856723822 7115.299710002078 5262.6255050135915 4930.324677775646 4843.882493323219 5235.391065559629 5085.27207588814 5265.3084224326885 4017.8766937523073 7655.145441721771 7163.738654341027 1.025473179744241 0.9932383149810197 0.734619974142215 0.6882334651876232 0.6761668350907749 0.7308182665746925 0.7098628692724024 0.7349944877235377 0.5608631034184344 1.0685964146783837 1.0 12.806496990919008 -5.741216138574728 7.752141974957501 0.7576193004952675 1.0113442289372039 0.311838485082902 0.13821826584883362 0.17075826442730327 45.422541009491674 0.021633563878837647 0.0806459313750328 1.8146123463479078e-06 5.741216138574728 0.2537249284419364 KPRS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 KPRSPPR 7 2 A0A087WZG9;B4DSP0;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7-2;Q86TG7 A0A087WZG9 PEG10 Retrotransposon-derived protein PEG10 1 KPRS(1)PPR;KPRS(1)PPR 67.563 0.0076912 875660000.0 11536.900000000001 10490.4 12980.4 11657.4 12889.3 11166.2 8699.4 9313.3 12647.5 14620.2 14854.8 True False 12708.117594983114 11374.462824062004 13861.32800148618 12377.451122123703 11984.00003367105 11075.266169341805 9030.46042749434 9127.538925357494 12115.969557865998 13697.078076901065 13027.753772335707 0.9754649816892197 0.873094704032214 1.0639844936984115 0.9500832866834714 0.9198822946069907 0.8501286071939748 0.693170947601913 0.7006226157528187 0.9300121701404985 1.0513768003496244 1.0 13.66930073737202 -4.83036818181022 13.569397710376066 0.9230230517256409 11.489778349664666 0.005372897008182997 0.11799908215697369 666985.5084028293 255101.7634145295 0.017063306562536004 218068353.63598883 1.4778549759049858e-05 4.83036818181022 10.566755297939025 KPS(ph)ASERLPDEK ddPTM_A549_MK2206_60min_R1 1 KPSASERLPDEK 12 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 KPS(0.669)AS(0.331)ERLPDEK 70.98 0.00056588 15766000.0 1769.3 1914.3 1656.2 1436.2 1812.5 1157.6 1458.9 1512.8 2260.7 2318.1 2269.9 True False 2067.9145847681066 2011.7296933636087 1891.0740640927575 1788.0690644734682 1545.8836510042322 1280.096463647309 1723.9632456925226 1727.2440327556972 1748.6550595960737 1794.4396000096306 1706.22118394702 1.2119850604505902 1.1790556302377235 1.108340514046435 1.0479702639355986 0.9060276976682019 0.7502523563129417 1.010398453560669 1.012321291639367 1.024870090729322 1.0517039741931546 1.0 10.736588965491478 -6.1099865974045455 1.9723012572102432 0.9863004891948087 1.1977250348227175 0.5451384524491047 0.08068948083816488 0.22664216087991884 1.6757883262967477 0.012365710719846002 0.047072543418769694 7.76271072462912e-07 6.1099865974045455 0.2114245456279088 KPS(ph)DEEFASR ddPTM_A549_MK2206_60min_R1 4 KPSDEEFASR 10 1 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KPS(0.998)DEEFAS(0.002)R;KPS(1)DEEFASR;KPS(0.988)DEEFAS(0.012)R;KPS(0.726)DEEFAS(0.274)R 101.2 0.00018037 299174000.0 26340.0 26424.199999999997 23763.199999999997 21639.6 28416.3 20299.9 17916.6 19854.6 28144.5 28099.5 29303.300000000003 True False 30785.54804882828 27769.07891311636 27133.179084560434 26941.302971438552 24236.29991284498 22448.021944016957 21171.81430377316 22669.050352162372 21769.81568753116 21751.803434049685 22026.48188006288 1.3976606984474271 1.2607133115639022 1.2318435250942117 1.223132369396871 1.1003255102115197 1.019137875319782 0.961198180401959 1.0291725421970865 0.9883473813962076 0.9875296269504656 1.0 14.426951462445436 -6.532927231763723 0.8320136110135723 0.991781255190134 1.3544213939774734 0.9379893531421382 0.03457205648567818 0.12248325417864526 0.14353248900151225 0.005583090535372925 0.027291046115775354 2.931384372376706e-07 6.532927231763723 0.36264013878733936 KPS(ph)DEEFASR ddPTM_A549_PD325901_60min_R1 2 KPSDEEFASR 10 1 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KPS(0.999)DEEFAS(0.001)R;KPS(1)DEEFASR 93.71600000000001 0.00024815 356770000.0 13562.300000000001 14283.7 14660.4 13853.2 17886.6 13786.0 16357.6 17390.8 20910.7 20700.6 22460.9 True False 14939.134711962426 15487.43752764952 15655.342904146863 14708.880701100075 16630.306921420153 13673.731386733738 16980.097419222166 17043.92685118132 20031.895997918033 19393.560583213508 19698.351691376203 0.7583951665612038 0.7862301257637616 0.794753954514918 0.7467061676810003 0.8442486550131391 0.6941561203174171 0.8620060036117606 0.8652463474211921 1.016932599832089 0.9845270755168753 1.0 14.265787293181992 -8.474299521388929 1.7399835027561048 1.0092868900142284 0.7772145123068025 0.8311869529905345 0.042795631049965435 0.0786972262250302 0.46483303828118794 0.0068813024723445824 0.00822596943763274 3.3550614474079764e-09 8.474299521388929 -0.23207237770742595 KPS(ph)EDEVLNK ddPTM_A549_MK2206_60min_R1 8 KPSEDEVLNK 10 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK 172.76 1.1881e-10 871277000.0 72741.40000000001 75090.1 68219.0 58140.3 80256.8 57880.200000000004 61204.5 57848.799999999996 88471.3 81919.4 83746.2 True False 85018.36996351705 78911.86535425093 77893.4800014151 72384.67611001714 68451.13103553999 64005.044346232724 72324.56540611968 66049.0445545199 68432.69180963513 63413.750644505766 62949.70726246266 1.3505760973445238 1.2535700130460592 1.237392251510334 1.1498810599422853 1.0873939532417471 1.0167647655511716 1.1489261594906148 1.0492351343134108 1.0871010332790223 1.007371652740311 1.0 15.941912048486984 -2.0000000000000013 0.2856005973573717 1.0272700213193287 3.6644471857752072 0.8735930255649155 0.038797851501894805 11.703989791925384 0.14587617260357694 0.015005204066305584 15.771633515636935 0.009999999999999969 2.0000000000000013 2.6371771644558786 KPS(ph)EDEVLNK ddPTM_A549_PD325901_60min_R1 3 KPSEDEVLNK 10 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK 183.79 4.1929e-14 394927000.0 19200.6 19559.2 20192.4 20244.9 22487.8 19618.5 23457.800000000003 27301.300000000003 32280.9 41151.0 45700.0 True False 21149.830777265357 21207.52242701838 21562.777690765277 21495.381493496152 20908.334506698415 19458.733440492942 24350.499415600687 26756.75415404447 30924.246032853636 38552.7188371264 40079.189716168614 0.5277010570084745 0.5291404985281654 0.5380043320103972 0.5363227561665139 0.5216755791413529 0.4855071566639723 0.6075596734376416 0.6675971830650645 0.7715786235163901 0.9619136292461917 1.0 15.290565721309068 -9.118829899725322 0.547622234518672 0.9814339455443196 0.5093201053858905 0.9683892728349477 0.03103818508464753 0.09520997442666504 0.06598805268759775 0.01591226255542938 0.011792171781902531 7.606241325311418e-10 9.118829899725322 -0.47211384015842917 down KPS(ph)FSK ddPTM_A549_MK2206_60min_R1 1 KPSFSK 6 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 KPS(0.999)FS(0.001)K 50.04 0.041007 89916000.0 7794.4 8621.5 7537.0 6947.2 9342.2 7032.0 6587.9 7376.1 9053.8 8574.3 8866.4 True False 9109.904165215916 9060.297524596113 8605.859933019632 8649.264311871664 7967.974755537507 7776.1215725361835 7784.836154841161 8421.68476335887 7003.128755947677 6637.359674890024 6664.628179808739 1.3669035870321202 1.3594603149873132 1.2912738266617902 1.297786474881766 1.1955617838782675 1.1667750042072627 1.1680825913778987 1.2636391012589923 1.050790616821575 0.9959084731836461 1.0 12.70230867413848 -7.183177910918115 0.25335278304126896 0.9636178469200978 1.4834188531779013 0.861864368867937 0.04769030839612882 0.868029301215791 0.10269351001154019 0.04258581385491293 0.14331615423653257 6.558765281442377e-08 7.183177910918115 0.5198010062578036 KPS(ph)FSK ddPTM_A549_PD325901_60min_R1 3 KPSFSK 6 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 KPS(0.998)FS(0.002)K;KPS(0.999)FS(0.001)K;KPS(0.997)FS(0.003)K 68.016 0.041007 225726000.0 17331.1 17542.9 19043.800000000003 17384.1 21774.1 19579.8 18750.1 19176.4 18428.6 18683.0 19738.6 True False 19090.5405135185 19021.301749812905 20336.22678767237 18457.876374844363 20244.762332567083 19420.348600462003 19463.6453159484 18793.91165840522 17654.110029182786 17503.352191539278 17310.87733329466 1.1028060649936526 1.0988063391350202 1.1747658074243843 1.0662588625328446 1.1694821667778543 1.1218581373175187 1.1243592650566152 1.0856706622406818 1.019827573685591 1.0111187234788166 1.0 14.07939122339431 -8.660271485970107 2.0904312151416478 1.0075822775895558 1.1236308104385608 0.7423812180121057 0.028934626581712305 0.09769468348546943 0.8425066043889056 0.004882066862930229 0.005459919802929383 2.186394438764274e-09 8.660271485970107 0.11604853284900507 KPS(ph)GDSQPS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 KPSGDSQPSSPR 12 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 2 KPS(0.544)GDS(0.456)QPS(0.544)S(0.456)PR;KPS(0.824)GDS(0.176)QPS(0.547)S(0.453)PR 68.809 0.0065271999999999995 3375100.0 861.64 763.1600000000001 809.6800000000001 639.12 1202.5 814.3199999999999 705.49 456.17 972.39 700.01 1105.34 True False 1007.0637669245411 802.0015842800871 924.5047990669145 795.7044286911874 1025.6138429421171 900.490801898132 833.6684009895248 520.8334944620349 752.1452175877496 541.8772548219409 830.8535721679369 1.2120833329232983 0.9652742807465259 1.1127168854249667 0.9576951406912348 1.2344098614946006 1.0838140823641058 1.0033878759337138 0.6268655656170917 0.9052680794585567 0.6521934465636666 1.0 9.698450431726716 -7.999182892500973 18.63815679341614 0.9239449325959185 1.0856377496826692 0.38405592685883116 0.14707855871005474 1.163931027885808 26486.197816877968 0.019615766048651204 0.026865468525430904 1.0018832306021952e-08 7.999182892500973 0.16169281708675076 KPS(ph)GLNGEASK ddPTM_A549_MK2206_60min_R1 1 KPSGLNGEASK 11 1 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 KPS(1)GLNGEASK 79.02199999999999 0.00041848 19179000.0 3145.0 3432.6 3612.9 2980.9 4631.0 3343.5 3148.4 3749.8 5029.3 4612.4 4365.5 True False 3675.799112132309 3607.3046781799712 4125.2635467701475 3711.220633817688 3949.786034648605 3697.306950764325 3720.4235264502972 4281.345633280875 3890.1715801417813 3570.4556365490753 3281.4258683293174 1.1201834993772937 1.0993101239908765 1.2571557951636603 1.1309780512296606 1.203679800531216 1.1267379179425883 1.13378259200001 1.3047211197431834 1.1855125595515577 1.088080541757572 1.0 11.680107125777274 -10.599744860776852 0.9305399572529685 1.0020050301752454 1.1737904433779827 0.3480567498052056 0.06465040268661769 0.34061396883768513 0.5359094034665562 0.037831725897521984 0.010884606957216488 2.5133625475289957e-11 10.599744860776852 0.1717854132027372 KPS(ph)GLNGEASK ddPTM_A549_PD325901_60min_R1 4 KPSGLNGEASK 11 1 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 KPS(1)GLNGEASK;KPS(0.997)GLNGEAS(0.003)K;KPS(1)GLNGEASK;KPS(0.999)GLNGEAS(0.001)K 90.49799999999999 0.000125 78178700.0 10109.390000000001 10131.61 9678.880000000001 8961.12 12179.099999999999 10265.720000000001 12231.52 12018.769999999999 12776.72 11756.26 12521.6 True False 11135.687830660425 10985.436331588382 10335.747000633608 9514.62803021987 11323.682031614067 10182.11937990862 12696.997186944567 11779.046203807327 12239.758890640642 11013.96773726412 10981.522580962306 1.0140386042610685 1.0003563941700453 0.9411943493657043 0.8664215695111841 1.0311577423011389 0.9272047027031077 1.156214640851008 1.072624139044946 1.1145775825166202 1.002954522568488 1.0 13.422790476489707 -7.739563742339077 24.999992852379354 1.0641258561678382 0.962738634986476 0.4403560253764992 0.059301834383462176 197.2757196013098 225450.89326068526 0.009809729853584177 0.014543104066934954 1.8215297036225015e-08 7.739563742339077 -0.10138722118136212 KPS(ph)GSGDQSKPNCTK ddPTM_A549_MK2206_60min_R1 1 KPSGSGDQSKPNCTK 15 2 H7BZK3;A0A087WWX2;Q8TBM8 H7BZK3 DNAJB14 DnaJ homolog subfamily B member 14 1 KPS(0.888)GS(0.111)GDQS(0.002)KPNCTK 59.434 0.0021869 12915000.0 630.77 795.9 863.95 528.27 944.88 476.61 563.33 433.86 861.18 760.51 863.4 True False 737.2285551541161 836.4079104362412 986.4711011187877 657.6961737149412 805.8894036749675 527.0445538518871 665.679769138371 495.36098364052486 666.124105021872 588.7102628028658 648.9939513722449 1.1359559724636976 1.2887761259834931 1.5200004546005013 1.013408788054644 1.2417517944057568 0.8120947086448099 1.0257102824006992 0.7632751932327326 1.0263949357515687 0.9071120948940833 1.0 9.342061222134838 -6.73118021041528 1.7317179062402301 0.984096425697873 1.297450389004186 0.4974763602412793 0.1485734647957652 0.23003330117388415 1.395242276674742 0.020638565752416065 0.051128269067744224 1.857033719394594e-07 6.73118021041528 0.31335396330631293 KPS(ph)GSGDQSKPNCTK ddPTM_A549_PD325901_60min_R1 1 KPSGSGDQSKPNCTK 15 2 H7BZK3;A0A087WWX2;Q8TBM8 H7BZK3 DNAJB14 DnaJ homolog subfamily B member 14 1 KPS(0.955)GS(0.039)GDQS(0.006)KPNCTK 52.784 0.0062317 16217000.0 1090.1 1153.8 1394.5 1320.0 1156.8 1031.0 1124.0 1781.3 1024.8 1902.7 2536.4 True False 1200.7661495107939 1251.0347752614514 1489.1391558097184 1401.5334020624912 1075.5503587433511 1022.6038778269611 1166.7744350764008 1745.7705740971828 981.7312198379976 1782.5631972831868 2224.438879564335 0.5398063127479451 0.5624046525865757 0.6694448516838423 0.6300615471785797 0.48351535689485964 0.45971318305101827 0.5245252840145098 0.7848139097618626 0.4413388153107059 0.8013540914337501 1.0 11.11922574309449 -10.881655337617325 0.9686051246187272 1.0177911811042628 0.5608186920909658 0.5589889356769238 0.10995574303869701 0.2513468721819568 0.3907063630025033 0.08442185838181956 0.017329801072524388 1.3132416931761102e-11 10.881655337617325 -0.456972489013297 KPS(ph)GSPDLWKLS(ph)PDQR ddPTM_A549_PD325901_60min_R1 2 KPSGSPDLWKLSPDQR 16 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 KPS(0.5)GS(0.5)PDLWKLS(1)PDQR;KPS(0.5)GS(0.5)PDLWKLS(1)PDQR 52.169 0.0056823 19942400.0 4524.299999999999 4536.8 4224.4 4200.5 4595.2 4839.6 4450.6 4159.4 5775.3 4985.9 5542.1 True False 4983.603605386375 4919.132057900983 4511.093187380836 4459.955344972345 4272.449004579399 4800.187902164268 4619.9700184617695 4076.4375040138257 5532.58422514675 4671.089423100984 4860.456834266482 1.0253364601968487 1.0120719565331469 0.9281212324688055 0.9176000316532843 0.8790221064115629 0.9876001507353559 0.9505217669850976 0.8386943126980827 1.138284818443759 0.9610391743775097 1.0 12.24687620375172 -8.77056336633468 24.999676512127852 1.0653011596085924 0.9430613727668473 0.22935601391755045 0.06735082917787488 145.0718981924643 397494.9859726223 0.012203197083388346 0.01308128625357484 1.6960421208438032e-09 8.77056336633468 -0.12223978684174508 KPS(ph)ISITTESLK ddPTM_A549_MK2206_60min_R1 2 KPSISITTESLK 12 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KPS(1)ISITTESLK;KPS(0.985)IS(0.015)ITTESLK 157.8 3.2267e-14 12328700.0 3962.4 4665.3 5223.4 4354.3 5927.9 5181.8 5994.4 5352.3 7969.700000000001 7482.1 7833.3 True False 4631.156248621006 4902.743842892569 5964.156663677157 5421.103695471957 5055.913762641645 5730.134636599544 7083.5048872295965 6111.0049157313015 6164.575674995718 5791.888413455871 5888.075421918236 0.7865314074241686 0.8326564270291458 1.0129212410350095 0.9206919590893847 0.8586700068109034 0.9731761613088784 1.2030255014841351 1.0378611817680212 1.0469593599375808 0.983664100479367 1.0 12.523580436038419 -7.519087826309222 24.99859366026127 1.0387389418452384 0.891626434628997 0.5354689338777004 0.07553334641580796 109.68571611243446 723304.9689162229 0.011649642463374181 0.017494330410995646 3.0263013647036344e-08 7.519087826309222 -0.14711250721624136 KPS(ph)ISITTESLK ddPTM_A549_PD325901_60min_R1 1 KPSISITTESLK 12 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KPS(0.485)IS(0.485)IT(0.029)TESLK 144.72 3.4374e-12 18034000.0 5904.7 5580.9 5891.4 6184.8 6841.4 6421.6 6658.1 6231.4 7774.4 7080.6 7707.1 True False 6504.140797189605 6051.222029170254 6291.22583186617 6566.82104930007 6360.88366554872 6369.304618674697 6911.477638952117 6107.109838561269 7447.669004204264 6633.529707617247 6759.175559332237 0.9622683624794283 0.895260372519171 0.9307682241186974 0.971541720089429 0.9410738942512591 0.9423197493192415 1.0225326414860758 0.9035288083513859 1.1018605655125262 0.9814110684635919 1.0 12.722631571258509 -8.757905763332904 24.99998857660402 1.0481008229495212 0.9470459300069543 0.3864677442829427 0.04377608637529309 55.002727907838405 389138.29133818106 0.007953528911777 0.008843744974566019 1.7462010163844895e-09 8.757905763332904 -0.10105489294256698 KPS(ph)IVTK ddPTM_A549_MK2206_60min_R1 2 KPSIVTK 7 1 P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100-4 ATRX Transcriptional regulator ATRX 1 KPS(0.998)IVT(0.002)K;KPS(0.972)IVT(0.028)K 57.348 0.014803 18127100.0 11325.0 11625.6 10609.4 9096.0 12632.2 9255.6 8576.599999999999 8501.3 12875.8 12099.8 12055.8 True False 13236.383130333352 12217.293383047563 12113.97245235219 11324.52040833496 10774.020113774157 10235.021448629963 10134.85720269141 9706.385309139347 9959.451858427532 9366.446776323935 9062.012136846774 1.4606450455427327 1.3481877091480816 1.3367861650831314 1.2496695256331285 1.1889213952788962 1.1294424785654007 1.1183892770880735 1.071107074517425 1.0990331626164687 1.0335945963081763 1.0 13.145615707731103 -2.000000000000001 0.20886000832634594 1.0000814200965642 3.3874072392117722 0.9802226506432791 0.019655620196945476 4.897227559815017 0.055570832424852744 0.016793105816322096 3.929498964863264 0.00999999999999998 2.000000000000001 2.3873258191152082 KPS(ph)IVTK ddPTM_A549_PD325901_60min_R1 2 KPSIVTK 7 1 P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100-4 ATRX Transcriptional regulator ATRX 1 KPS(0.998)IVT(0.002)K;KPS(1)IVTK 57.492 0.014657 25952000.0 7671.4 8438.4 9720.599999999999 9475.0 9853.3 9898.7 9220.9 10559.1 11868.0 14080.2 13294.8 True False 8450.1948806138 9149.53358256737 10380.298370716348 10060.249230713709 9161.238200039641 9818.088269103522 9571.806395370091 10348.4904670463 11369.229232081718 13191.173769058028 11659.62388268094 0.7247399200557073 0.7847194450378432 0.8902772915458373 0.8628279378425815 0.7857233039607417 0.8420587463106068 0.8209361203827452 0.8875492529752884 0.9750939950103733 1.1313549992510508 1.0 13.509233630236839 -8.598124274974209 1.8123040010745917 0.9910000940625341 0.8176601492439957 0.7120769406323164 0.05922835636154048 0.11417057434339933 0.7354390651168146 0.007852624744436843 0.008968206214854845 2.5227587724193864e-09 8.598124274974209 -0.17333994481853843 KPS(ph)LAK ddPTM_A549_PD325901_60min_R1 2 KPSLAK 6 1 Q96HE9 Q96HE9 PRR11 Proline-rich protein 11 1 KPS(1)LAK;KPS(1)LAK 52.482 0.037536 300450000.0 12382.9 13050.2 11654.5 10084.7 14285.0 14652.6 12901.8 13835.2 14592.9 13943.4 12862.0 True False 13640.002892190822 14149.986153680884 12445.44445420176 10707.609014984544 13281.670880574668 14533.274083654047 13392.785059135855 13559.24608249556 13979.611161176723 13063.011344404464 11280.055538935689 1.2092141607910738 1.254425220233976 1.1033141114636773 0.9492514445540436 1.1774472948940673 1.2884044793475644 1.1872977941382998 1.2020549044011994 1.2393211285993142 1.1580626796840225 1.0 13.461486550615042 -10.882903385932554 1.1209757892865146 0.9995650482344828 1.1808838823594552 0.057738987708794376 0.0971410833794961 0.46474372733622277 1.0328770630268798 0.06565188735913581 0.015635405125278272 1.309473198772012e-11 10.882903385932554 0.1813188341249724 KPS(ph)LVASK ddPTM_A549_MK2206_60min_R1 2 KPSLVASK 8 1 P56211;H3BMD8;H3BQ52;P56211-2 P56211;P56211-2 ARPP19 cAMP-regulated phosphoprotein 19 1 KPS(0.997)LVAS(0.003)K;KPS(0.999)LVAS(0.001)K 56.205 0.0080585 70266000.0 6463.0 7577.6 8514.2 6293.6 8979.3 6335.700000000001 6314.9 7284.3 9762.2 8824.0 7098.0 True False 7553.796394820701 7963.267473453522 9721.641587065904 7835.532282530443 7658.4568648067825 7006.139568702716 7462.235588610397 8316.871832233157 7551.077287030029 6830.652271465844 5335.3707051658475 1.4157959797445592 1.4925424892675734 1.8221117377379519 1.4686012866817058 1.4354123242817338 1.3131495365297083 1.398634884242488 1.55881798881951 1.4152863417192127 1.2802582330131673 1.0 12.38137279862169 -11.664307256889021 0.26830350188289187 0.5405501262546681 1.549762278624818 0.38604653715017256 0.14878733474111175 3.358958992677554 0.2015407881030942 1.1072223825106229 0.07090985551991946 2.166171028772338e-12 11.664307256889021 1.0092121523701498 KPS(ph)LVASK ddPTM_A549_PD325901_60min_R1 2 KPSLVASK 8 1 P56211;H3BMD8;H3BQ52;P56211-2 P56211;P56211-2 ARPP19 cAMP-regulated phosphoprotein 19 1 KPS(1)LVASK;KPS(0.733)LVAS(0.267)K 72.958 0.002263 134998000.0 11162.099999999999 12565.1 10584.599999999999 9997.4 16027.1 11874.2 12337.3 12804.7 12743.099999999999 11429.5 12546.0 True False 12295.268174896286 13624.005074222294 11302.934606370416 10614.916692257239 14901.4117864934 11777.500452078471 12806.802702729601 12549.300213407174 12207.551822323952 10707.839419429325 11002.921535646641 1.117454862789194 1.2382170526331588 1.0272666736513398 0.9647361982785784 1.3543141008700872 1.0703975679479667 1.1639456540009714 1.1405425525166806 1.1094827662611806 0.9731814759142537 1.0 13.42559902378701 -10.191711567367824 0.6589453587479208 0.9990070359776939 1.1352748876904 0.2405505447655535 0.09836016017819785 0.9113242122406711 0.7431162228151261 0.0629663527828518 0.02053440345591693 6.431146941447466e-11 10.191711567367824 0.13626785171270606 KPS(ph)PAASPATK ddPTM_A549_MK2206_60min_R1 5 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPS(0.997)PAAS(0.003)PATK;KPS(0.55)PAAS(0.449)PAT(0.001)K;KPS(0.996)PAAS(0.004)PATK;KPS(0.932)PAAS(0.067)PAT(0.001)K;KPS(0.996)PAAS(0.003)PAT(0.001)K 79.652 0.00039504 127435600.0 8917.08 9748.289999999999 8922.28 8152.49 11869.279999999999 8643.48 8481.51 9164.970000000001 11804.51 11954.16 12286.39 True False 10422.0651023252 10244.436322686895 10187.59346731888 10149.850415979183 10123.32463514014 9558.127316522334 10022.490580556307 10464.132564043482 9130.807332928931 9253.706953475306 9235.34027588653 1.1284982243195962 1.109264630934619 1.1031097028356045 1.0990228960464443 1.0961506920943818 1.034951288311336 1.0852324095436987 1.1330532770260051 0.9886812028755957 1.0019887385889539 1.0 13.172949402912579 -8.772193518898064 24.99999467620066 0.9946550021046016 1.0965193660751633 0.7734012256338236 0.02450551197561063 68.09630898672708 158302.02817355038 0.004370157197284493 0.004675636901796983 1.6896878495601551e-09 8.772193518898064 0.10186436397056176 KPS(ph)PAASPATK ddPTM_A549_PD325901_60min_R1 5 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPS(1)PAASPATK;KPS(0.984)PAAS(0.016)PATK;KPS(1)PAASPATK;KPS(0.972)PAAS(0.027)PAT(0.002)K;KPS(0.996)PAAS(0.004)PATK 97.291 0.00011689 127952800.0 10382.9 10631.400000000001 10361.300000000001 10883.5 13241.7 11667.2 11935.400000000001 12229.0 12286.800000000001 12634.5 12682.199999999999 True False 11436.964364513007 11527.345388901545 11064.480125558439 11555.74907677812 12311.648673385054 11572.186191447834 12389.60817830149 11985.08300153509 11770.428524497951 11836.755513782738 11122.369799089585 1.0282848503606823 1.0364109085678044 0.9947952033085714 1.0389646528138283 1.1069267517424943 1.0404424956626661 1.1139360048355553 1.0775655924078447 1.058266245154105 1.0642296315980817 1.0 13.441176589656116 -6.5038775355581375 24.367566053491252 1.0452451912108969 1.0207203007039265 0.10996936816206704 0.034566575313100464 1305.7250114990397 1674487.6412678056 0.005925929628664645 0.013549691460358037 3.134169387842415e-07 6.5038775355581375 -0.024524890506970376 KPS(ph)PAASPATKK ddPTM_A549_PD325901_60min_R1 1 KPSPAASPATKK 12 2 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPS(0.999)PAAS(0.001)PATKK 53.828 0.0044961 6331700.0 1839.1 1858.9 2158.0 1917.3 2826.3 3102.9 2752.2 2379.0 2826.3 2295.1 3133.9 True False 2025.8040781261368 2015.5560268101174 2304.4548571081905 2035.727266495768 2627.7904382056813 3077.6310111632165 2856.9364770616285 2331.5489787106053 2707.5204397230004 2150.186994315785 2748.450167428903 0.7370714237912557 0.7333427582918896 0.8384561177123114 0.7406818906962875 0.9560989932969767 1.1197696242178015 1.0394718124848563 0.8483140812742852 0.9851080699257534 0.7823270801111972 1.0 11.42440260655006 -6.821804699161087 5.221038214163722 0.9939827538560321 0.765576400392952 0.5057547354051246 0.09162781547553651 0.07796727487943018 4.236097442557279 0.009531502069965172 0.018505462184815163 1.507284734925074e-07 6.821804699161087 -0.22840635346308003 KPS(ph)PEPEGEVGPPK ddPTM_A549_MK2206_60min_R1 6 KPSPEPEGEVGPPK 14 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK 144.07 6.3947e-22 489275000.0 38215.0 40102.4 37926.8 35499.7 48813.7 38986.799999999996 37499.5 38813.5 55891.8 53833.5 53498.1 True False 44664.75773295267 42143.44086880049 43305.390541017485 44197.12809364211 41633.26939311739 43112.35729865665 44312.67374860977 44315.43248635854 43232.396540864225 41672.4749610105 40213.04529755326 1.110703191028168 1.0480042124878486 1.076899056527121 1.0990743865979047 1.0353174967241425 1.0720987923110563 1.10194772419551 1.1020163272502739 1.0750838744235736 1.0362924432272738 1.0 15.295375973815514 -10.446017492166181 0.7833542850758722 0.9997114042053133 1.079241032562301 0.46756808196683874 0.02443377307849166 0.3274092858399355 0.3624916295444654 0.01504105947541837 0.004384418917391329 3.580820142708859e-11 10.446017492166181 0.07952962835698763 KPS(ph)PEPEGEVGPPK ddPTM_A549_PD325901_60min_R1 4 KPSPEPEGEVGPPK 14 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK 152.71 5.2846000000000004e-14 676367000.0 44381.5 41503.4 43437.100000000006 44247.700000000004 54774.8 42927.9 49390.9 48737.4 51317.700000000004 49320.9 55074.1 True False 48887.07720806651 45001.03717419498 46385.00281450149 46980.77993518221 50927.60701080161 42578.30941509989 51270.497727237525 47765.294323249356 49160.99553110887 46206.76995684257 48300.33484348454 1.0121477908276058 0.9316920331922995 0.9603453674764447 0.9726802119989789 1.054394491794532 0.8815323859156119 1.0614936292549046 0.9889226333115709 1.0178189383244085 0.9566552717817363 1.0 15.55974557017075 KPS(ph)PQAEEMLK ddPTM_A549_MK2206_60min_R1 3 KPSPQAEEMLK 11 1 Q15013;Q15013-3 Q15013 MAD2L1BP MAD2L1-binding protein 1 KPS(1)PQAEEMLK;KPS(1)PQAEEMLK;KPS(1)PQAEEMLK 93.494 0.00012142 19534900.0 5138.6 5217.099999999999 5081.2 5328.6 6394.8 5125.5 5237.4 4949.200000000001 7493.199999999999 7739.599999999999 7948.0 True False 6005.870053291918 5482.628105964205 5801.790565431777 6634.107239209947 5454.133391140334 5667.877007968461 6188.967785996316 5650.764256289323 5796.002164181577 5991.218984614351 5974.292246359275 1.005285614702208 0.9177033663368762 0.971126005589596 1.1104423696803185 0.9129338114425312 0.948711039608492 1.0359332169878137 0.9458466414549591 0.9701571207390554 1.0028332625116207 1.0 12.544552096810415 -10.924305874719046 1.234806185712561 0.9997680128603109 0.9785529083890919 0.022797040659701673 0.053526906129602245 1.957678601003456 5.395140051153806 0.03411679588555007 0.00842864539766872 1.190403308605284e-11 10.924305874719046 -0.021215104471218993 KPS(ph)PQAEEMLK ddPTM_A549_PD325901_60min_R1 2 KPSPQAEEMLK 11 1 Q15013;Q15013-3 Q15013 MAD2L1BP MAD2L1-binding protein 1 KPS(1)PQAEEMLK;KPS(1)PQAEEMLK 102.52 9.578399999999999e-05 8680400.0 3403.5 3586.1 4141.9 3946.0 4340.200000000001 4293.2 3907.2 4208.200000000001 4533.1 3729.1 4682.5 True False 3749.020814475728 3888.3132324190424 4422.994241268034 4189.735457983779 4035.359324877154 4258.237602605925 4055.890634101876 4124.264149730963 4342.589571279886 3493.643989587812 4106.582184813122 0.9129296932958703 0.9468489993451787 1.077049975433357 1.0202487785288148 0.9826564143293265 1.0369298387241954 0.9876560242971121 1.0043057618530642 1.0574705133966542 0.850742498837095 1.0 12.003722455606683 -5.596571157782683 6.4236383868758775 1.023129237836755 0.9210189039367189 0.11469671988167451 0.05868428212475366 0.08941771674081539 5.978450750308164 0.004101131273188039 0.01638694970623136 2.5317967743694817e-06 5.596571157782683 -0.10211033390003599 KPS(ph)PQPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 2 KPS(1)PQPS(0.545)S(0.455)PR 62.924 0.011134999999999999 16905000.0 1078.8 1059.1 1286.5 882.35 1073.9 957.31 1059.1 960.22 1401.6 1588.8 1585.3 True False 1260.8750658722834 1113.0036662181467 1468.9450449555197 1098.5257896101966 915.9307325867281 1058.611908789051 1251.524760787547 1096.3341255504197 1084.1398378952788 1229.8889765304777 1191.6262579458182 1.0581128583435544 0.9340207626313934 1.232722957521729 0.9218710835592758 0.7686392662793894 0.8883757820291208 1.0502661824060378 0.920031862540804 0.9097985468733882 1.0321096638560303 1.0 10.218716104056057 KPS(ph)PQPS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 2 KPS(0.998)PQPS(0.543)S(0.458)PR 48.659 0.050364 29347000.0 875.48 649.54 891.9 863.4 909.42 896.77 933.51 912.64 1002.3 1079.2 800.6 True False 964.3580851056875 704.2790153608282 952.4296974303966 916.7302570763297 845.5454765286812 889.4670024431459 969.0352338862727 894.4366792477705 960.1768165921396 1011.0591278225755 702.1312754215447 1.3734726238005952 1.0030588865849823 1.3564837955104307 1.3056393998771019 1.204255537571708 1.266810115970306 1.3801339832134447 1.2738881040596997 1.3675175144643283 1.4399858875614922 1.0 9.45559698197645 -10.869787439679204 1.085686176520977 0.9979722116657902 1.282335994023261 0.0 0.16453924132911243 0.33207839328447875 0.6868037857746807 0.07228929261433437 0.016987238565184002 1.349623278190128e-11 10.869787439679204 0.28436378235747084 KPS(ph)PQPSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 2 KPS(1)PQPS(0.304)S(0.696)PR 91.62 0.0010445 15569000.0 1238.9 1107.3 972.75 993.31 1189.9 991.31 1043.9 825.04 1691.7 1441.0 1850.3 True False 1447.9960318030899 1163.6568403393003 1110.700577132127 1236.6709945913808 1014.8672862509991 1096.2097662216777 1233.5631175395338 941.9919465790325 1308.5326510897853 1115.4770991820362 1390.819444317887 1.0411100000929627 0.836669953884635 0.7985943694343866 0.8891671738152132 0.7296901768214279 0.7881754678511145 0.8869326083836295 0.6772927646557477 0.940835747181793 0.8020286916028201 1.0 10.441719426544678 -8.972139763130109 19.14519435585055 0.9738998450205169 0.8278199455846853 0.04466466904385258 0.10346864876892807 10.474287911374962 7198.200925252099 0.015036093974471759 0.015717819997798508 1.0662529282252231e-09 8.972139763130109 -0.14607989943583155 KPS(ph)PQPSS(ph)PR ddPTM_A549_PD325901_60min_R1 3 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 2 KPS(0.994)PQPS(0.183)S(0.823)PR;KPS(1)PQPS(0.064)S(0.936)PR;KPS(0.997)PQPS(0.104)S(0.899)PR 85.536 0.0013559000000000002 453880000.0 6599.599999999999 6688.7 6622.6 7695.5 8094.2 6784.4 7193.8 8141.4 8079.4 7516.6 7948.3 True False 7269.5865336312645 7252.38022299469 7072.0494609289635 8170.833557251443 7525.691315474096 6729.150095760649 7467.563995598407 7979.013390195253 7739.850914870331 7042.000593209018 6970.70948842501 1.0428761298548657 1.0404077569202101 1.0145379710160394 1.1721667028039628 1.0796162611525617 0.965346512709291 1.0712774658014987 1.1446486765005126 1.1103390447876926 1.0102272379737511 1.0 12.767089787719932 KPS(ph)PQPSSPR ddPTM_A549_MK2206_60min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPS(0.996)PQPS(0.003)S(0.001)PR 70.628 0.0012639 16860000.0 3501.9 3099.0 2849.1 3184.3 3959.9 2960.1 2814.2 3166.9 4566.8 4229.3 5023.4 True False 4092.935106765066 3256.72586310078 3253.1452215956238 3964.453642948661 3377.4039556478124 3273.335817244644 3325.5037124051687 3615.817773224496 3532.4270916810465 3273.8981926235833 3775.9511412130323 1.0839481110050069 0.8624915263216435 0.8615432509411507 1.0499218593371609 0.8944511804680858 0.8668904058417128 0.8807062348102427 0.9575912499924208 0.9355065676369548 0.8670393419263991 1.0 11.882624381780882 -10.305315354838834 0.7178396964650162 0.9998589601376755 0.9272226053632108 0.0 0.08119424550929637 1.1498465411079883 1.0927557176588167 0.044883727766408796 0.014043150350713686 4.950905594740299e-11 10.305315354838834 -0.07263635477446473 KPS(ph)PQPSSPR ddPTM_A549_PD325901_60min_R1 3 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPS(1)PQPSSPR;KPS(0.94)PQPS(0.046)S(0.014)PR;KPS(0.997)PQPS(0.003)S(0.001)PR 87.98899999999999 0.00029829 102235200.0 8963.9 7749.929999999999 8654.14 9443.42 10112.8 10024.880000000001 10198.18 10351.86 9389.16 10096.8 12966.099999999999 True False 9873.908529125589 8403.0437994817 9241.461981971399 10026.718605837092 9402.511815266049 9943.240701018372 10586.277320558229 10145.384031422931 8994.566256883416 9459.286324869327 11371.351898879959 0.8683143936560557 0.7389661206693791 0.8126968599821146 0.8817525563363043 0.8268596292576404 0.8744114850581441 0.9309603127840009 0.892188028445608 0.7909847779637662 0.8318523961782447 1.0 13.473116160768935 -10.916923412007053 1.0491825518464186 1.0044461635559991 0.8427003854783661 0.0 0.07022783840431142 0.3517900309742272 0.6557266448670167 0.043913143543611664 0.009282192748090449 1.2108116418058754e-11 10.916923412007053 -0.16174577807763302 KPS(ph)PSESPEPWKPFPAVSPEPR ddPTM_A549_MK2206_60min_R1 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.973)PS(0.013)ES(0.013)PEPWKPFPAVSPEPR;KPS(0.968)PS(0.015)ES(0.017)PEPWKPFPAVSPEPR 81.292 3.0261e-05 7553800.0 4571.3 4531.799999999999 4861.6 3534.2 6101.0 5418.7 4722.9 5291.0 7838.099999999999 7433.6 7843.3 True False 5342.823682445285 4762.449263117169 5551.047983331328 4400.079158656266 5203.550981945828 5992.103237358051 5580.989795792183 6041.015453007929 6062.7828648736995 5754.344597140585 5895.592145932274 0.9062403826783748 0.8077982915427877 0.9415590234072301 0.7463337099551819 0.8826171914785647 1.0163700420647934 0.9466377011243639 1.0246664463002229 1.0283585965248259 0.976041838496385 1.0 12.52542100763758 -7.197134742944292 4.374126391724312 1.0094177538308011 0.8500913810861247 0.6441469609324002 0.05237803985894771 0.08989128018391268 3.4599154814487045 0.006967351327019461 0.012201008186772177 6.351338464976648e-08 7.197134742944292 -0.15932637274467643 KPS(ph)PSESPEPWKPFPAVSPEPR ddPTM_A549_PD325901_60min_R1 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.963)PS(0.035)ES(0.002)PEPWKPFPAVSPEPR;KPS(0.963)PS(0.03)ES(0.007)PEPWKPFPAVSPEPR 97.06299999999999 1.8930999999999997e-07 11947400.0 4098.4 3856.4 4227.9 3544.8 4833.0 5308.5 4568.2 3894.6000000000004 5049.8 4995.2 5862.700000000001 True False 4514.466550917382 4181.392362036975 4514.830718428046 3763.754245175091 4493.546752944861 5265.269336027568 4742.045350814959 3816.919147745406 4837.574467152537 4679.802219513836 5141.625066717324 0.8780232888120034 0.8132433438415978 0.8780941161294251 0.7320164726787564 0.8739545755742493 1.0240477023714964 0.9222853259976272 0.7423565698037803 0.9408648830633408 0.9101795947368951 1.0 12.328008695668126 -9.287425451775244 0.2725056500234914 1.0345374923342177 0.8227624769945787 0.11474229565379068 0.08357284050678183 1.6892636528426068 0.3601715670172017 0.1319032951839018 0.07606882398906488 5.159107154196846e-10 9.287425451775244 -0.21177501533963894 KPS(ph)SETDIENWASK ddPTM_A549_PD325901_60min_R1 2 KPSSETDIENWASK 14 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 KPS(0.494)S(0.494)ET(0.011)DIENWASK;KPS(0.459)S(0.459)ET(0.082)DIENWASK 140.81 2.8104000000000003e-13 12756100.0 4844.1 5016.5 4630.5 5389.8 4995.0 5052.0 4555.799999999999 4461.5 5527.3 5009.0 6771.2 True False 5335.869465962056 5439.258060408284 4944.753575458518 5722.715704876068 4644.168431814523 5010.858186985264 4729.173462029414 4372.511882520958 5295.006802703514 4692.7308851587095 5938.385326173324 0.898538773232567 0.9159489931437852 0.8326764438246551 0.9636821106325493 0.7820591249519353 0.8438081922538774 0.7963736272191144 0.7363132640196305 0.8916576664983105 0.7902368451025878 1.0 12.535854993702937 -9.857066422968158 1.0533602937548703 0.983278652660304 0.8499338457050818 0.0 0.0851388492775251 0.31533488596600273 0.7135303024515602 0.020910546527622604 0.012506180359265078 1.3897400618087543e-10 9.857066422968158 -0.13334480695522222 KPS(ph)TSDDSDSNFEK ddPTM_A549_MK2206_60min_R1 1 KPSTSDDSDSNFEK 14 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KPS(0.467)T(0.467)S(0.067)DDSDSNFEK 130.0 4.2308999999999995e-09 38754000.0 9533.0 10712.0 9808.9 10363.0 14753.0 11446.0 10056.0 11019.0 16637.0 15150.0 16398.0 True False 11141.937340526954 11257.19504534868 11199.949515323897 12901.935465212742 12582.85324318092 12657.208122760117 11883.045033027634 12580.976994272221 12868.746063829722 11727.604477868032 12325.92403822338 0.9039433721946674 0.9132942090539816 0.908649889500554 1.0467317034571297 1.0208446201810744 1.0268770181861746 0.9640693059747607 1.0206924004446163 1.0440390532931259 0.951458441695736 1.0 13.589408184805109 -6.252617824743581 24.991796884478216 1.018979133078915 0.9090956509037361 0.6936261647864371 0.029303600059886525 200.25874620235902 567338.9962276247 0.0033163994435299006 0.008633860006293416 5.589618598076674e-07 6.252617824743581 -0.10988348217517896 KPS(ph)TSDDSDSNFEK ddPTM_A549_PD325901_60min_R1 2 KPSTSDDSDSNFEK 14 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KPS(0.934)T(0.033)S(0.033)DDSDSNFEK;KPS(0.955)T(0.036)S(0.007)DDSDS(0.001)NFEK 98.943 8.5252e-06 4386200.0 1565.1 1748.4 1556.5 1340.4 1729.9 1722.3 2070.2 1563.1 1531.8 1624.7 1980.0 True False 1723.987799834276 1895.7438040103343 1662.1334499948553 1423.1934637307297 1608.3977918310202 1708.274159826746 2148.9825938569065 1531.9227442717715 1467.4237729779893 1522.1161647269632 1736.4725522541335 0.9928102794347939 1.0917211455772504 0.9571895898021666 0.8195888048349899 0.9262442932041407 0.9837611067386105 1.2375563270880898 0.8822038345974236 0.8450601600774575 0.8765564205153074 1.0 10.761943891443247 KPS(ph)VGVPPPASPSYPR ddPTM_A549_MK2206_60min_R1 1 KPSVGVPPPASPSYPR 16 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KPS(1)VGVPPPASPSYPR 58.107 0.0031416 7835400.0 1528.2 1565.1 1966.2 1812.1 2176.7 1480.1 1326.6 1457.5 1971.3 2390.8 2764.2 True False 1786.1227990971684 1644.7569049174022 2245.0367255278206 2256.06458134826 1856.5103134570547 1636.7231995891357 1567.6260482114608 1664.105088406549 1524.803697519236 1850.716619517287 2077.772851961035 0.859633331627852 0.7915961089611189 1.080501520370198 1.0858090571445047 0.8935097557487339 0.7877296105993349 0.7544742182630361 0.8009080910052031 0.7338644819043151 0.890721340290182 1.0 11.02082222799875 -6.993740854593404 24.8956923359496 0.8495103580419596 0.9565022822104965 0.22725955312198987 0.10514234840690549 263.9429398514038 1049818.3427558322 0.01924071676623738 0.03629327576091609 1.0145165716117767e-07 6.993740854593404 0.10699192416853687 KPS(ph)VPDSASPADDSFVDPGER ddPTM_A549_MK2206_60min_R1 2 KPSVPDSASPADDSFVDPGER 21 1 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 KPS(0.9)VPDS(0.1)ASPADDSFVDPGER;KPS(0.837)VPDS(0.143)AS(0.02)PADDSFVDPGER 187.38 6.445199999999999e-45 35931000.0 7727.0 8617.3 6942.8 5872.6 10455.7 6764.2 5686.200000000001 6549.5 10407.3 9686.1 9671.3 True False 9031.12869298771 9055.883762535768 7927.393438101191 7311.387263631033 8917.68038058204 7479.983154287432 6719.308936635018 7477.911682002537 8050.063167043042 7498.003282711392 7269.6492956988495 1.2423059663044618 1.2457112295491009 1.0904781118934448 1.0057414004767573 1.2267002186554257 1.028933150697246 0.9242961611106267 1.0286482026618406 1.1073523411653339 1.031411967444929 1.0 12.827670051618483 -5.821746838716419 3.8732517168670384 1.0496656133613262 1.247540300178765 0.5303420555409442 0.07149062090684657 0.12968363748331377 3.8593397635103486 0.01041517776669672 0.03814841187387093 1.5074855617337783e-06 5.821746838716419 0.1978746868174388 KPS(ph)VPDSASPADDSFVDPGER ddPTM_A549_PD325901_60min_R1 2 KPSVPDSASPADDSFVDPGER 21 1 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 KPS(0.651)VPDS(0.329)AS(0.02)PADDSFVDPGER;KPS(0.891)VPDS(0.102)AS(0.007)PADDSFVDPGER 101.93 4.9849e-10 19772200.0 9365.4 9129.7 10237.2 9363.4 12409.4 11573.7 10926.400000000001 12009.900000000001 13823.8 14045.300000000001 15519.1 True False 10316.168513556919 9899.091859684937 10931.957953284507 9941.755952175707 11537.806554105933 11479.447624448001 11342.210131155507 11770.353122915709 13242.83375955943 13158.477361014115 13610.349083680365 0.7579650198632033 0.7273209378262421 0.8032092260140916 0.7304556180778989 0.8477230439254835 0.8434352090360824 0.8333518899052711 0.8648090545325599 0.9729973623849509 0.9667994024335443 1.0 13.732416449685694 -8.152702090297643 0.5539617924987861 1.002432934268436 0.7497480028493483 0.8648740126505846 0.033583931702201454 0.15756811821487846 0.10380465973964867 0.009107272172342392 0.013882753038555221 7.035547665388952e-09 8.152702090297643 -0.25268493141908765 KPS(ph)VSAQMQAYGQSSYSTQTWVR ddPTM_A549_MK2206_60min_R1 2 KPSVSAQMQAYGQSSYSTQTWVR 23 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 KPS(0.824)VS(0.175)AQMQAY(0.001)GQSSYSTQTWVR;KPS(0.968)VS(0.032)AQMQAYGQSSYSTQTWVR 89.149 4.784499999999999e-07 5317300.0 2344.12 2890.7 2963.83 2424.8 3964.8 3434.6000000000004 2236.1800000000003 2774.46 3797.4 3782.7 3766.6 True False 2739.750147768388 3037.8242828220136 3384.145660777703 3018.876108853408 3381.5831721388 3798.0470922970376 2642.464960417236 3167.7482014274005 2937.29496320172 2928.1854428007528 2831.2492671284413 0.9676824218826713 1.0729624968355713 1.1952835449949732 1.0662699833262173 1.1943784715107504 1.3414739339249908 0.9333211989127763 1.118851751488575 1.0374554431870402 1.0342379517048415 1.0 11.467223056378028 -8.504349047090896 1.1971795718496046 1.014680020322449 1.1267385774592826 0.12473466276075695 0.10566285862657666 0.5622626515772018 1.5644833122539623 0.020511215277215333 0.02425699958873165 3.1307684809807212e-09 8.504349047090896 0.11205855713683355 KPS(ph)VSEEVQATPNK ddPTM_A549_MK2206_60min_R1 4 KPSVSEEVQATPNK 14 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 KPS(0.853)VS(0.147)EEVQATPNK;KPS(0.965)VS(0.035)EEVQATPNK;KPS(0.594)VS(0.406)EEVQATPNK;KPS(0.984)VS(0.016)EEVQATPNK 163.74 8.083800000000001e-20 310141800.0 16716.6 18052.100000000002 16578.2 15486.0 22382.5 15923.0 15070.9 16409.399999999998 23797.4 23403.7 23202.399999999998 True False 19537.953398369136 18970.874783246723 18929.238044525133 19280.07069519295 19090.063899918452 17607.961291168038 17809.087449110604 18735.48270167988 18407.326896638904 18116.78791542444 17440.603726336994 1.1202567127229055 1.0877418626626365 1.0853545176271713 1.1054703723402752 1.0945758644289711 1.0095958584609268 1.0211279224363756 1.0742450775019614 1.0554294556238362 1.0387706870528997 1.0 14.090162361058615 -2.000000000035375 0.06798073343481004 0.9252988156291524 1.3973062121299338 0.5422211501801296 0.02623297761909405 108.563381445481 0.5310787272152918 0.6534542291502294 4.9214943941123845 0.009999999999185464 2.000000000035375 0.4720073965007814 KPS(ph)VSEEVQATPNK ddPTM_A549_PD325901_60min_R1 3 KPSVSEEVQATPNK 14 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 KPS(0.993)VS(0.007)EEVQATPNK;KPS(0.975)VS(0.025)EEVQATPNK;KPS(0.978)VS(0.022)EEVQATPNK 134.04 2.611e-09 94959800.0 5439.110000000001 5047.7 6260.5 6674.2 6959.6 7048.599999999999 6248.5 8103.3 7788.900000000001 8338.7 9368.5 True False 5991.284443138848 5473.0873939046905 6685.3751774447755 7086.45017579203 6470.781705316589 6991.198538555879 6486.2900868104 7941.673324584123 7461.559619629373 7812.193058908556 8216.233891814574 0.7292008141476677 0.6661309142327674 0.813678780992966 0.862493725118014 0.7875605527446228 0.8509006231578756 0.7894480819578868 0.9665831607466796 0.908148394736298 0.9508240833664017 1.0 13.004261536152429 -2.536571600914948 0.11436847082931881 1.076318913702727 3.3505841345718113e-14 0.7437792575912813 0.04992860718104815 24.37739217760198 0.21059720802685958 0.20510308997586735 4.120541009814884 0.0029068886693418127 2.536571600914948 -1.0763189137026934 KPSAPS(ph)PPDQTPEEDLVIVK ddPTM_A549_MK2206_60min_R1 2 KPSAPSPPDQTPEEDLVIVK 20 1 Q15776;Q15776-2 Q15776 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 1 KPS(0.124)APS(0.876)PPDQTPEEDLVIVK;KPS(0.016)APS(0.984)PPDQTPEEDLVIVK 136.4 1.5752e-17 13856600.0 2311.3999999999996 3541.8 3083.8 2745.7 4522.0 3991.3999999999996 3354.8 3495.6000000000004 5190.5 3804.1000000000004 4419.8 True False 2701.507811695586 3722.062491749059 3521.1292107530758 3418.396623259156 3856.81979025718 4413.767298723109 3964.3237347654253 3991.112004826025 4014.8600375252854 2944.751167937808 3322.241679725559 0.8131581239805377 1.1203466967690707 1.0598654613965188 1.0289427900806842 1.1609088567499342 1.3285509376571658 1.1932677140733803 1.2013310257295067 1.2084792211314805 0.886374758919124 1.0 11.697941312043973 -5.259959073637619 6.116661958382418 1.1253267064570167 0.8051027362467676 0.3662424547642936 0.11530953447539116 0.10377545513515835 19.400261738558807 0.0151305105349561 0.13638951718671327 5.49592663068953e-06 5.259959073637619 -0.32022397021024906 KPSAPS(ph)PPDQTPEEDLVIVK ddPTM_A549_PD325901_60min_R1 2 KPSAPSPPDQTPEEDLVIVK 20 1 Q15776;Q15776-2 Q15776 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 1 KPS(0.013)APS(0.987)PPDQTPEEDLVIVK;KPS(0.156)APS(0.844)PPDQTPEEDLVIVK 155.97 4.4033e-27 20065300.0 4215.3 4475.5 4160.4 4347.6 5507.3 4408.3 4613.0 4881.6 4657.8 4791.6 4703.4 True False 4643.234152860154 4852.666091768619 4442.749762517573 4616.1413778840015 5120.486247153574 4372.400266367207 4788.550239330455 4784.232658458885 4462.048863935815 4489.057558260427 4124.911617309138 1.125656640344973 1.176429107330602 1.0770533225184047 1.1190885541676925 1.24135659674907 1.059998533791499 1.1608855373377036 1.1598388286389156 1.08173199280488 1.0882796953571667 1.0 12.010147492351246 -9.555324175081639 0.7269968040090474 1.008982061017425 1.141470613477695 0.28158876293697277 0.05326317076995594 0.31285269216358425 0.35698891878412603 0.017545969308930272 0.01058388943398336 2.784042270348796e-10 9.555324175081639 0.13248855246027014 KPSDGS(ph)PDTKPSR ddPTM_A549_MK2206_60min_R1 2 KPSDGSPDTKPSR 13 2 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 KPS(0.066)DGS(0.933)PDT(0.002)KPSR;KPS(0.059)DGS(0.933)PDT(0.008)KPSR 94.01 5.7086e-05 157915000.0 5402.6 5580.2 5842.2 5864.3 6949.4 6127.1 5366.1 6200.700000000001 8593.8 8901.2 8995.5 True False 6314.426799111612 5864.2083450387145 6670.711808503021 7301.053763258428 5927.152465814511 6775.465655160183 6341.050910076528 7079.668213847336 6647.318021478623 6890.412737848119 6761.669086830002 0.9338562295825001 0.867272306546425 0.9865481026712557 1.0797709366580819 0.8765812685745128 1.002040408685047 0.9377937353407712 1.0470296790531668 0.983088337526883 1.019040217639292 1.0 12.723163697747685 -5.777816291461713 23.352363040607337 0.9904683304291464 0.9005643185041686 0.31292676434099653 0.05243756452293682 75.88979584190974 108215.03085912472 0.006383290015427353 0.01995173132638965 1.6679526148778097e-06 5.777816291461713 -0.08990401192497777 KPSDGS(ph)PDTKPSR ddPTM_A549_PD325901_60min_R1 6 KPSDGSPDTKPSR 13 2 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 KPS(0.402)DGS(0.593)PDT(0.004)KPS(0.001)R;KPS(0.129)DGS(0.821)PDT(0.046)KPS(0.004)R;KPS(0.037)DGS(0.952)PDT(0.009)KPS(0.003)R;KPS(0.459)DGS(0.522)PDT(0.018)KPS(0.002)R;KPS(0.019)DGS(0.965)PDT(0.013)KPS(0.003)R;KPS(0.02)DGS(0.972)PDT(0.008)KPSR 101.67 4.6119e-05 377543000.0 24067.4 23509.399999999998 23963.7 25390.6 28441.5 26109.1 26205.499999999996 27022.0 24379.2 25867.299999999996 27654.4 True False 26510.704730516558 25490.619644246468 25590.02078743447 26958.919695763554 26443.867157848385 25896.476146044508 27202.76464269981 26483.025011651072 23354.62700495171 24234.03426345896 24253.084115685204 1.0930859186428699 1.0510259034545182 1.0551243984217509 1.1115666596121028 1.0903300805667984 1.0677601257852594 1.1216208426501502 1.0919446320859332 0.9629549336303818 0.9992145389784088 1.0 14.565880597178646 -8.757196429180093 24.999997667684482 0.9825064939261853 1.084826798302338 0.7911926341731841 0.022363605673215575 33.24681008882342 195894.18893450082 0.004136298577582252 0.004609551705708487 1.7490554208449474e-09 8.757196429180093 0.1023203043761528 KPSFS(ph)K ddPTM_A549_PD325901_60min_R1 1 KPSFSK 6 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 KPS(0.192)FS(0.808)K 57.047 0.031045999999999997 182030000.0 9162.8 8898.8 8473.2 8401.1 9214.9 8021.4 8526.6 8517.7 8409.0 8699.2 9170.4 True False 10093.000710703147 9648.73310634132 9048.242305490796 8920.016866717571 8567.677213679202 7956.076377886694 8851.084428934555 8347.807791493613 8055.59897308521 8149.931027385243 8042.498935955204 1.2549582898396003 1.1997182944227949 1.1250535906245838 1.109110108406641 1.0653003851049467 0.9892542655265835 1.1005390860997752 1.0379619391895074 1.0016288515838578 1.0133580485724092 1.0 12.97342812466758 -2.0000000000000004 0.2953533505366258 0.9953582641778714 3.306590652175505 0.8794408607645928 0.028750088874358887 9.55148378849944 0.11935883414842144 0.009397373978186399 11.799844477000496 0.00999999999999999 2.0000000000000004 2.3112323879976335 KPSFS(ph)KK ddPTM_A549_MK2206_60min_R1 1 KPSFSKK 7 2 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 KPS(0.044)FS(0.956)KK 51.727 0.010076 2494300.0 1342.8 1530.4 1727.5 1455.0 1666.9 1639.4 1300.8 1284.1 1837.4 2012.3 2008.4 True False 1569.4318116919753 1608.2908231330857 1972.4854762228208 1811.4750653174324 1421.7012181290781 1812.8802198543547 1537.1385221720707 1466.1251073913204 1421.2318337248741 1557.720032396954 1509.6588509798662 1.0395936874568137 1.0653339475267547 1.306576962697599 1.1999234556480545 0.9417367488067269 1.2008542318535596 1.0182025701862167 0.9711631912333772 0.9414258279626572 1.0318357895135666 1.0 10.560006854341248 -7.939162984400995 5.8182553476476 0.9724282051989774 1.1258999126607288 0.33930635322903746 0.09249858835555508 0.15835333111527028 10.680978354220606 0.014276064149732232 0.019766137035193226 1.1503685913289185e-08 7.939162984400995 0.15347170746175132 KPSGDSQPS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 KPSGDSQPSSPR 12 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 KPSGDS(0.022)QPS(0.489)S(0.489)PR;KPS(0.001)GDS(0.115)QPS(0.442)S(0.442)PR 53.967 0.0071952 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KPSGLNGEAS(ph)KSQEMVHLVNK ddPTM_A549_MK2206_60min_R1 2 KPSGLNGEASKSQEMVHLVNK 21 2 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 KPS(0.022)GLNGEAS(0.489)KS(0.489)QEMVHLVNK;KPSGLNGEAS(0.567)KS(0.433)QEMVHLVNK 145.75 2.8587e-22 148783000.0 3293.4 3810.8 3595.8 3442.3 5371.6 4108.0 4199.9 4143.0 5989.3 6151.9 5693.1 True False 3849.2454041006476 4004.7534427571622 4105.738509639375 4285.663654530721 4581.444755715491 4542.705833330294 4962.967465613835 4730.282937405376 4632.733112946767 4762.181517319889 4279.346148433317 0.8994938176501263 0.9358330230479991 0.9594312699248458 1.0014762783561497 1.0705945714143208 1.0615420383773801 1.159749011523827 1.1053751609079694 1.082579663400874 1.1128292388928016 1.0 12.063174665289855 -6.263809621637977 1.5764857989521788 1.0578010573413805 0.9155462081459994 0.6879403420499801 0.04361741361742676 0.24187060729536516 1.122342091836139 0.007685201468230524 0.029048801389673747 5.447413946442678e-07 6.263809621637977 -0.14225484919538112 KPSGLNGEAS(ph)KSQEMVHLVNK ddPTM_A549_PD325901_60min_R1 1 KPSGLNGEASKSQEMVHLVNK 21 2 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 KPSGLNGEAS(0.549)KS(0.451)QEMVHLVNK 92.675 4.5125e-07 213800000.0 2901.2 2477.6 3394.8 3662.9 3808.1 3019.5 3886.4 3531.8 3808.3 3931.6 3589.7 True False 3195.7276882494425 2686.396047137956 3625.1915425907723 3889.1490139505304 3540.632193231806 2994.910193112033 4034.299078719682 3461.3554783565 3648.2503947199907 3683.3581050289467 3148.1896569831615 1.0151001167165499 0.8533145521201757 1.151516248250657 1.235360457183324 1.124656573779838 0.9513118710840271 1.2814663404318718 1.0994748904910125 1.158840728234914 1.1699924421194576 1.0 11.620306740674934 -5.767905074927623 24.99967980574062 1.1013793761923396 0.9342073242185441 0.3404006084477905 0.09878182139739568 129.3588790787069 500176.19570569653 0.014164746733798519 0.04560422624992208 1.7064553334020244e-06 5.767905074927623 -0.16717205197379548 KPSGLNGEASKS(ph)QEMVHLVNK ddPTM_A549_MK2206_60min_R1 9 KPSGLNGEASKSQEMVHLVNK 21 2 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 KPS(0.007)GLNGEAS(0.316)KS(0.677)QEMVHLVNK;KPSGLNGEAS(0.205)KS(0.794)QEMVHLVNK;KPSGLNGEAS(0.013)KS(0.987)QEMVHLVNK;KPS(0.007)GLNGEAS(0.365)KS(0.628)QEMVHLVNK;KPSGLNGEAS(0.386)KS(0.614)QEMVHLVNK;KPS(0.006)GLNGEAS(0.17)KS(0.824)QEMVHLVNK;KPSGLNGEAS(0.009)KS(0.991)QEMVHLVNK;KPSGLNGEAS(0.012)KS(0.988)QEMVHLVNK;KPSGLNGEAS(0.005)KS(0.995)QEMVHLVNK 178.85 1.9639999999999998e-36 730129000.0 31921.500000000004 32714.199999999997 34309.299999999996 31037.9 47109.8 38020.0 35825.7 37123.8 55354.6 55961.100000000006 57200.3 True False 37309.06879425483 34379.213046354154 39174.87464507766 38642.18689334427 40180.01082597471 42043.251164366535 42334.765954627896 42386.21233686934 42816.87148313211 43319.448643328105 42995.88686203125 0.8677357653762382 0.7995930670455295 0.9111307500362821 0.8987414776986111 0.9345082462168449 0.9778435620895177 0.9846236243591203 0.9858201663075754 0.995836453392075 1.007525412426894 1.0 15.391911032676399 -6.567648996870925 0.7214624763918698 0.9983160050775359 0.8248017344291491 0.8790995305853374 0.022054024445669486 0.18261249440948768 0.15349784247287268 0.0033933759127227573 0.018096894747193712 2.7061446260277924e-07 6.567648996870925 -0.17351427064838687 KPSGLNGEASKS(ph)QEMVHLVNK ddPTM_A549_PD325901_60min_R1 11 KPSGLNGEASKSQEMVHLVNK 21 2 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 KPS(0.002)GLNGEAS(0.066)KS(0.932)QEMVHLVNK;KPSGLNGEAS(0.112)KS(0.888)QEMVHLVNK;KPS(0.319)GLNGEAS(0.195)KS(0.486)QEMVHLVNK;KPSGLNGEAS(0.091)KS(0.909)QEMVHLVNK;KPS(0.192)GLNGEAS(0.122)KS(0.686)QEMVHLVNK;KPS(0.003)GLNGEAS(0.194)KS(0.803)QEMVHLVNK;KPS(0.002)GLNGEAS(0.232)KS(0.766)QEMVHLVNK;KPSGLNGEAS(0.021)KS(0.979)QEMVHLVNK;KPSGLNGEAS(0.043)KS(0.957)QEMVHLVNK;KPSGLNGEAS(0.038)KS(0.962)QEMVHLVNK;KPSGLNGEAS(0.001)KS(0.999)QEMVHLVNK 190.48 1.7537000000000002e-45 1029095000.0 55808.1 52900.299999999996 55184.4 55026.50000000001 64799.3 65225.5 59063.299999999996 65633.8 68434.20000000001 63374.6 66886.20000000001 True False 61473.69722824823 57358.393934619024 58929.54523475496 58425.3619307513 60248.0207134492 64694.32515344562 61310.98620217791 64324.68237028005 65558.1485603411 59373.11694042308 58659.62142655575 1.047972962205626 0.9778173220301819 1.004601526597596 0.9960064608310206 1.0270782396521634 1.1028766224556286 1.045199145700962 1.0965751364559553 1.1176026535122219 1.0121633160343637 1.0 15.84008013990799 -7.022956260531214 8.816158594751547 1.062465316867163 1.0052402483134522 0.3334530874903302 0.03721076677067064 0.3157797518216906 113.26952169626047 0.006889102501199965 0.01221375311327231 9.485139869848091e-08 7.022956260531214 -0.05722506855371079 KPSGS(ph)GDQSKPNCTK ddPTM_A549_PD325901_60min_R1 1 KPSGSGDQSKPNCTK 15 2 H7BZK3;A0A087WWX2;Q8TBM8 H7BZK3 DNAJB14 DnaJ homolog subfamily B member 14 1 KPS(0.072)GS(0.928)GDQSKPNCTK 129.46 6.0401e-10 123800000.0 6750.4 7312.5 8070.4 6899.8 6529.8 8336.9 7913.0 8406.4 7233.2 12067.0 10928.0 True False 7435.695638618173 7928.750038220983 8618.105875257623 7325.984975417253 6071.169374587083 8269.00705049039 8214.133545159744 8238.727757306773 6929.213758130561 11305.087560632894 9583.925278299577 0.7758507524525949 0.8272967294698834 0.899225069583043 0.7644033903316347 0.6334741975017002 0.8627996160626906 0.8570740387301029 0.8596402327928547 0.7230037335349481 1.1795884496543876 1.0 13.226400944766365 -10.928515972614589 1.1137346833077495 1.0031660529601758 0.7964558349046754 0.5578817345808404 0.0918970365250521 0.3513129539521805 0.7543604918706416 0.05768455381686199 0.012745676381082253 1.1789191637987564e-11 10.928515972614589 -0.20671021805550038 KPSGS(ph)PDLWK ddPTM_A549_MK2206_60min_R1 3 KPSGSPDLWK 10 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.008)GS(0.992)PDLWK;KPS(0.427)GS(0.573)PDLWK;KPS(0.024)GS(0.976)PDLWK 75.764 0.00063615 56084000.0 12535.599999999999 11138.4 10234.6 9196.3 18609.6 13686.5 12405.3 12760.5 18313.6 17358.4 19275.9 True False 14651.302814005008 11705.296984047021 11686.02017652682 11449.393912837593 15872.152491988047 15134.796345636572 14659.182433195878 14569.339952392298 14165.598840809758 13437.125384067618 14489.162042224056 1.0111904864690204 0.807865696438183 0.8065352670134842 0.790204007621143 1.0954499953643768 1.0445598097068016 1.0117343149642712 1.0055336471449894 0.9776686049564927 0.9273914768093137 1.0 13.822686540870443 -6.753269633641523 24.999964366206463 1.002532616098601 0.8472705168902759 0.5476460723274783 0.06748933895015463 99.24906449796478 303706.15421874874 0.008873919347945876 0.018222877795133336 1.7649417086265816e-07 6.753269633641523 -0.15526209920832512 KPSGS(ph)PDLWK ddPTM_A549_PD325901_60min_R1 2 KPSGSPDLWK 10 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.018)GS(0.982)PDLWK;KPS(0.06)GS(0.94)PDLWK 88.73 0.00029181 76924000.0 21192.2 16471.8 14246.9 17596.2 17201.7 18381.1 14384.800000000001 13189.0 23391.2 19864.9 26018.0 True False 23343.616543126933 17859.936393787124 15213.78030756937 18683.0773101303 15993.511934643417 18231.410415834274 14932.221435664587 12925.935048429663 22408.149209089162 18610.626823834962 22817.95094169093 1.0230373710058054 0.7827142953995504 0.6667461222283594 0.8187885651026727 0.7009179735513189 0.7989941981391266 0.6544067639474919 0.5664809728735346 0.9820403798023329 0.8156134120628369 1.0 14.477881622578792 -8.85542545930828 10.233619101568953 0.991966845071133 0.7487172036615359 0.26826612981018505 0.12290360481405294 0.2004671506003061 20.268236151139725 0.018790592115999396 0.019988307462931346 1.3950010698955e-09 8.85542545930828 -0.24324964140959704 KPSGS(ph)PDLWKLS(ph)PDQR ddPTM_A549_MK2206_60min_R1 2 KPSGSPDLWKLSPDQR 16 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 KPS(0.456)GS(0.544)PDLWKLS(1)PDQR;KPS(0.444)GS(0.556)PDLWKLS(1)PDQR 62.273999999999994 0.0030516 8418300.0 4283.6 4795.3 4141.4 4144.6 6784.1 5069.7 4686.3 4864.3 5997.1 7017.2 7066.6 True False 5006.5669560349625 5039.36028761767 4728.7127937650885 5160.027186058168 5786.167876842926 5606.172289005501 5537.740049550259 5553.829421293979 4638.766425400807 5432.009646342943 5311.768191761762 0.9425424407262071 0.948716153583927 0.8902332750700684 0.9714330520034863 1.08931106704109 1.0554248767294367 1.0425417393287166 1.0455707442029643 0.873299861352244 1.02263680383637 1.0 12.37497647278274 -3.8205531104876416 10.307099646735807 0.9664720397037858 0.5975184241630758 0.0 0.07053674468096063 0.0 0.0 0.010649728495907573 0.0 0.00015116348280916594 3.8205531104876416 -0.36895361554071004 KPSGS(ph)PDLWKLS(ph)PDQR ddPTM_A549_PD325901_60min_R1 3 KPSGSPDLWKLSPDQR 16 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 KPS(0.466)GS(0.534)PDLWKLS(1)PDQR;KPS(0.443)GS(0.557)PDLWKLS(1)PDQR;KPS(0.445)GS(0.555)PDLWKLS(1)PDQR 61.703 0.0031836 25026100.0 8985.1 9030.939999999999 10060.89 9769.900000000001 10749.900000000001 10759.9 9568.8 10076.2 11202.5 10985.8 11581.4 True False 9897.26073751898 9792.009007886685 10743.682496446352 10373.364533947222 9994.864109141732 10672.274941833479 9932.945920248274 9875.222286374023 10731.697882743138 10292.154713151649 10156.961220543451 0.9744312814250781 0.9640687598650456 1.0577654342832579 1.0213059111583564 0.9840407866209175 1.0507350289226027 0.9779446533829346 0.9722614935656558 1.056585493408917 1.013310427171343 1.0 13.310181217899828 -5.7355042798162 24.9944110376487 1.0202831135005048 0.9692499563784498 0.24721665548259453 0.029506543720222787 223.6766691481641 215560.28967242522 0.004372453913143158 0.016922472192676435 1.8386358346786975e-06 5.7355042798162 -0.05103315712205503 KPSGSPDLWKLS(ph)PDQR ddPTM_A549_MK2206_60min_R1 2 KPSGSPDLWKLSPDQR 16 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPSGSPDLWKLS(1)PDQR;KPSGSPDLWKLS(1)PDQR 77.221 8.753600000000001e-05 25732000.0 4796.8 4728.4 3643.5 4703.3 7255.8 5083.7 5265.0 5310.299999999999 7636.5 7156.5 7057.299999999999 True False 5606.382569499607 4969.055363370677 4160.203086898898 5855.608711139161 6188.481431700141 5621.653759713052 6221.582348736124 6063.0512871116935 5906.844942984651 5539.841679594894 5304.777638428702 1.0568553390223236 0.9367132238256329 0.7842370350760203 1.1038367883170344 1.1665863969244894 1.0597341006320127 1.1728262281280057 1.14294164626052 1.1134952952965405 1.0443117614324395 1.0 12.373076563293244 -6.297642658229632 24.99161787552733 1.0807639224904162 0.9270129238807198 0.4862198289144122 0.0780108852457992 425.0223342934701 293398.0436673485 0.012051669317886394 0.028006369118151804 5.039150645257608e-07 6.297642658229632 -0.15375099860969643 KPSGSPDLWKLS(ph)PDQR ddPTM_A549_PD325901_60min_R1 2 KPSGSPDLWKLSPDQR 16 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPSGSPDLWKLS(1)PDQR;KPSGSPDLWKLS(1)PDQR 92.932 1.6796e-06 44512000.0 6610.8 6059.2 5194.799999999999 5989.5 6139.9 6357.1 5861.3 5340.4 7972.2 6801.2 8149.700000000001 True False 7281.923549386261 6569.830048764253 5547.3503668700805 6359.457811858556 5708.654605505101 6305.329885289785 6084.354978926429 5233.881532537243 7637.156158072292 6371.771071299944 7147.338565204807 1.01883008380723 0.9191995018604514 0.776142100484241 0.8897658553378359 0.7987105344773211 0.8821926970111434 0.8512756074753094 0.7322839802240803 1.0685314664191299 0.8914886307918115 1.0 12.803190414165726 -8.780925975501425 24.993362591702027 1.0323620989411804 0.857416232048493 0.27097887193734094 0.085002955533273 131.02252340260705 168047.82799763317 0.012820517571002136 0.01365802638259375 1.656052209716442e-09 8.780925975501425 -0.17494586689268732 KPSLVSDLPWEGAAPQS(ph)PSFSGSEDSGSPK ddPTM_A549_MK2206_60min_R1 2 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.809)PS(0.181)FS(0.01)GSEDSGSPK;KPSLVSDLPWEGAAPQS(0.948)PS(0.049)FS(0.003)GSEDSGSPK 123.62 2.0168e-21 24110000.0 1655.02 1769.81 1191.3400000000001 1392.19 2785.3999999999996 1635.17 1709.82 1638.81 2300.33 2040.68 1823.1 True False 1934.3469146458544 1859.8857695302968 1360.2899260453237 1733.276612497785 2375.6713497970677 1808.2026040619999 2020.4721617314337 1871.1163361451368 1779.3089278721777 1579.688970686187 1370.3739549996976 1.4115467588890955 1.3572103897222034 0.9926414035252326 1.2648201654548867 1.7335934772618995 1.3194957460078105 1.4743947477693267 1.3654056466255224 1.2984112266440224 1.1527429902785447 1.0 10.420353921939599 -10.183709212923484 0.7220140469331328 1.0063735692885192 1.3612672074739665 0.2774926635012357 0.17110533297249222 0.5506465630175114 0.550482151445282 0.10145446154508844 0.036054241747216 6.55074640338946e-11 10.183709212923484 0.3548936381854473 KPSLVSDLPWEGAAPQS(ph)PSFSGSEDSGSPK ddPTM_A549_PD325901_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.97)PS(0.029)FS(0.001)GSEDSGSPK 153.55 1.7337999999999998e-37 26970000.0 1330.2 1147.3 1213.9 1060.6 1597.4 1205.7 1253.7 1031.2 2357.1 1975.5 2739.3 True False 1465.2409247585167 1243.9869974497 1296.2825537736949 1126.1108532026349 1485.2041347308336 1195.8811789485615 1301.4102395509644 1010.6319070392493 2258.0392840360482 1850.7665928590604 2402.3834658534065 0.6099113424584007 0.5178136692710689 0.5395818661752287 0.46874733747079084 0.6182210941096532 0.49778946448240924 0.5417162822042069 0.42067884723816945 0.939916260718152 0.7703876667339644 1.0 11.230250735510038 -8.791224980693833 9.767895849878222 0.9718969939058782 0.527605285669948 0.80052572781679 0.08180676908721259 0.05484801557714533 17.23397602029727 0.009187013194438657 0.00981413472789589 1.617242029082747e-09 8.791224980693833 -0.4442917082359302 KPSLVSDLPWEGAAPQSPSFS(ph)GSEDSGSPK ddPTM_A549_PD325901_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.062)PS(0.182)FS(0.516)GS(0.207)EDS(0.023)GS(0.009)PK 128.14 1.1219e-27 27038000.0 2206.6 1667.7 1472.2 1688.1 2064.7 1643.5 1750.9 1627.7 2099.5 2058.9 1504.1 True False 2430.612407586937 1808.2429317936599 1572.1123450577752 1792.3701030467355 1919.6825948283163 1630.115880900689 1817.5314576292435 1595.2342465940524 2011.2653162079187 1928.9007026259271 1319.1052352754764 1.8426220612181394 1.3708102154685438 1.1918020662918996 1.3587771885936184 1.4552914684076876 1.2357739453291325 1.3778517505843102 1.2093305400769714 1.524719379790722 1.4622796203390882 1.0 10.365343948837495 -10.921117791759528 1.070469097659607 0.9906224540261457 1.3915465168229189 0.0 0.21815938087391054 0.42529616129402037 0.8314028276809898 0.1329153350313024 0.028504908140198567 1.1991740124072518e-11 10.921117791759528 0.4009240627967732 KPSLVSDLPWEGAAPQSPSFSGS(ph)EDSGSPK ddPTM_A549_MK2206_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.126)PS(0.097)FS(0.049)GS(0.508)EDS(0.113)GS(0.107)PK 128.4 1.0989000000000001e-27 15936000.0 1122.6 1307.1 1100.9 949.91 1730.7 1583.5 1540.3 1378.6 2241.2 2224.9 1877.7 True False 1312.067435065097 1373.6258069245014 1257.0241741092354 1182.6379926430795 1476.1163226444276 1751.0649189577705 1820.1525720338564 1574.0207717854323 1733.5717784609715 1722.2935447398422 1411.4152681163573 0.929611195729909 0.9732258378908648 0.8906125663404728 0.8379093094418635 1.0458412601802294 1.2406447333495987 1.289593936774533 1.1152074143891646 1.2282506910773021 1.2202599643394647 1.0 10.462926806338418 -6.9637812876626235 5.73225033503174 1.1348149725466905 0.9129799790265294 0.6771769273657987 0.08524519976242838 0.12292887950183568 10.736768449315722 0.015668380434273516 0.029644178055214174 1.0869728894454418e-07 6.9637812876626235 -0.22183499352016112 KPSLVSDLPWEGAAPQSPSFSGS(ph)EDSGSPK ddPTM_A549_PD325901_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.056)PS(0.074)FS(0.181)GS(0.443)EDS(0.214)GS(0.031)PK 145.09 3.3985e-36 37716000.0 1850.2 1989.1 1598.1 1866.9 1974.3 1761.4 1849.5 1619.4 2163.1 2243.2 2372.7 True False 2038.030941954748 2156.7284377470573 1706.5566761559783 1982.214172962472 1835.6319789652484 1747.0557423903088 1919.8837345852337 1587.0997966052764 2072.1924293828765 2101.5639691730917 2080.872941784535 0.9794115253413568 1.0364536894297205 0.8201157513694483 0.9525877977261531 0.8821451526929988 0.8395782881832524 0.9226338120090894 0.762708652092999 0.9958284274703412 1.0099434362248048 1.0 11.022973161386663 -8.9357453162169 24.999998791860197 0.9981617649554102 0.8999672074584614 0.28439820083319367 0.07232845694902587 56.43381455526599 21956.768702528047 0.012205243587067269 0.012993377831377285 1.1594570985058886e-09 8.9357453162169 -0.09819455749694883 KPSLVSDLPWEGAAPQSPSFSGSEDSGS(ph)PK ddPTM_A549_MK2206_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQSPSFSGS(0.01)EDS(0.392)GS(0.598)PK 133.15 6.6926e-28 16341000.0 1266.2 1274.1 1025.9 1038.4 1434.4 1604.8 1350.1 1492.0 1637.8 1871.5 2100.3 True False 1479.9036043821718 1338.946247878898 1171.3880463426876 1292.8080466155482 1223.4016601381895 1774.6188708199745 1595.3956940225344 1703.495569058367 1266.840915029171 1448.7268501868014 1578.7375446688973 0.9373968519210369 0.8481119945492335 0.7419776962283864 0.8188872501202751 0.774924029816982 1.1240746613093051 1.010551563437437 1.0790239168066627 0.8024392143628032 0.9176489499973458 1.0 10.62455563668581 KPSLVSDLPWEGAAPQSPSFSGSEDSGS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQSPSFSGS(0.001)EDS(0.374)GS(0.625)PK 92.469 6.31e-10 2387900.0 1568.0 1470.9 1448.1 1324.9 1612.0 1976.3 1567.5 1560.8 1741.1 1786.2 1741.3 True False 1727.1822056994079 1594.8579051239988 1546.3767741327026 1406.7360639337833 1498.7786810981002 1960.2056680401777 1627.1520702689124 1529.668619576086 1667.9276218383468 1673.4190271652017 1527.131139010164 1.1309979618508141 1.0443490178307366 1.0126024770439905 0.9211625825700753 0.9814341694777825 1.2835869939177054 1.0654959673755189 1.0016615996498943 1.092196720524894 1.0957926168998537 1.0 10.576608240363392 -5.261280771424465 17.904267710696246 1.0446306314748541 1.130999406783501 0.06200769865792355 0.08868629741392955 0.6038239139547333 63269.4011207956 0.012047047984167853 0.09625139576202082 5.479226183650005e-06 5.261280771424465 0.08636877530864684 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK ddPTM_A549_MK2206_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 0 103.07 2.7056e-14 7250500.0 478.06 748.56 627.35 684.94 777.16 938.23 706.74 715.93 1318.4 1168.5 1213.6 False True 558.7448405551578 786.6585066417298 716.3176633912515 852.7503307481256 662.8407934976265 1037.5128758533301 835.1455098092634 817.4152699436712 1019.7845050521801 904.5350384415048 912.2296263439379 0.6125045979864879 0.8623470274633857 0.7852383245456865 0.9347978909277533 0.7266161658815887 1.1373374048500335 0.9154992182794868 0.8960630594949359 1.1179032949623704 0.9915650756342219 1.0 9.833253214920417 -5.632291258847641 0.37680460217862616 1.0538622615193791 0.4853371692897319 0.5022485701887311 0.10644231117168998 2.441270989407393 0.28142555757961657 0.02911188779883211 0.5956507681969583 2.331893657284658e-06 5.632291258847641 -0.5685250922296472 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK ddPTM_A549_PD325901_60min_R1 2 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 0 ; 104.29 2.3931000000000002e-14 9597300.0 2173.02 1876.9299999999998 1998.48 2236.2599999999998 1788.0900000000001 1879.4299999999998 2610.0 2523.1000000000004 2403.61 1989.91 2177.71 False True 2393.623390707225 2035.1054781864082 2134.108870636504 2374.3887012850505 1662.5007269756213 1864.1245452030294 2709.324978246801 2472.7747911663414 2302.5946304789313 1864.2667429998342 1909.8654756410856 1.2532942352412315 1.0655753005343391 1.1174131884446712 1.2432230078864785 0.8704805381214448 0.9760501820565648 1.4185946669031024 1.29473767796986 1.20563184153377 0.9761246364087789 1.0 10.899255308022376 -10.831908551061119 1.1686555256692843 1.0030304180418175 1.1592109182039347 0.16970756815294208 0.1454029709383758 0.78921291320052 1.9701437705749583 0.09493622120754489 0.02531519470555007 1.4726225583931483e-11 10.831908551061119 0.15618050016211726 KPSPAAS(ph)PATK ddPTM_A549_PD325901_60min_R1 1 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPS(0.435)PAAS(0.564)PAT(0.001)K 81.619 0.0003218 128970000.0 4039.9 3962.8 4567.1 3534.7 4827.6 4567.8 4587.3 4345.2 4321.9 4357.6 4654.9 True False 4450.027673982806 4296.759063447811 4877.050870203345 3753.0303911138517 4488.526030315875 4530.601351249262 4761.872211766878 4258.531577256542 4140.265572812099 4082.4603923273303 4082.3768098423056 1.0900580424751878 1.052514077850101 1.194659654749444 0.9193248359792696 1.0994884204452597 1.109794994995641 1.1664460272962456 1.0431500509677452 1.0141801616230595 1.0000204739760483 1.0 11.995193636214863 -8.519084951246766 6.332402597994313 1.0076182009099948 1.0886583696374639 0.2468930633749532 0.0660666285162559 0.15524343800738624 28.21737529000634 0.010506756083796783 0.012259305400906972 3.0263213991148365e-09 8.519084951246766 0.08104016872746911 KPSPQPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPS(0.002)PQPS(0.499)S(0.499)PR 58.676 0.008614299999999998 19809000.0 318.71 375.39 283.21 146.74 425.24 361.18 213.82 142.25 328.49 443.54 589.01 True False 372.5004562886132 394.4957475796714 323.37343659685376 182.69130658740895 362.6877593120218 399.39982786811976 252.6683262690899 162.41437312235442 254.08753949073912 343.3440059480918 442.74256115099115 0.8413477469169203 0.8910273874598971 0.7303870577885819 0.41263551918855307 0.8191843096564918 0.9021039830230146 0.570689037919083 0.36683704566402703 0.5738945423051075 0.775493562343556 1.0 8.79032425715681 -10.840742167891962 1.1535627492161564 0.9953709653099063 0.670976777129782 0.12208947460575437 0.1855274730471787 0.4820410557933578 1.1640506182384043 0.12048824697699856 0.031345257785842025 1.4429717612898066e-11 10.840742167891962 -0.32439418818012433 KPSPQPS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPS(0.002)PQPS(0.499)S(0.499)PR 48.004 0.025747000000000003 2274300.0 655.02 706.32 526.79 381.82 824.52 508.71 738.93 735.82 572.88 669.58 897.68 True False 721.5171481997621 765.8440652302553 562.5411372456088 405.40415422386366 766.6085596395818 504.5672344222629 767.0503855080109 721.1434928603767 548.8038458438639 627.302604528762 787.2710508623691 0.9164786986761665 0.9727832166461058 0.7145456912576763 0.5149486365334885 0.9737542855155746 0.640906627862875 0.9743154973979944 0.9160040777194121 0.697096438695046 0.79680639068542 1.0 9.620716618913702 -7.782299325091946 24.99973860273713 0.8666976700134019 0.7898309621197614 0.07542446329373831 0.15141071577349546 676.9329269249545 811272.4667346333 0.026423481656044055 0.03652960987337137 1.6508236229217926e-08 7.782299325091946 -0.07686670789364047 KPSPQPSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPSPQPS(0.231)S(0.769)PR;KPSPQPS(0.152)S(0.848)PR 80.69 0.00048986 839910000.0 5055.2 5001.1 4861.4 4021.7000000000003 6446.9 5098.8 4489.3 4032.0 7587.3 7780.2 7861.9 True False 5908.394172226153 5255.634628574799 5550.819620323948 5007.016680540973 5498.569550156792 5638.351631690482 5304.947699559564 4603.5483474821285 5868.788664428397 6022.64741641643 5909.573252598388 0.9998004796079454 0.8893424963069781 0.9392928022143224 0.8472721238101975 0.9304512043638885 0.9541047027738166 0.8976871040945342 0.778998440447115 0.993098556117896 1.0191340658597174 1.0 12.528838237638666 -8.945590470149538 24.999998798212427 0.996955871337978 0.9044091484885749 0.3922273256569013 0.05496281922896736 65.99453869604731 30323.020112744365 0.009018355319620088 0.00960027010145991 1.1334686947322506e-09 8.945590470149538 -0.09254672284940313 KPSPQPSS(ph)PR ddPTM_A549_PD325901_60min_R1 5 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPSPQPS(0.025)S(0.975)PR;KPSPQPS(0.003)S(0.997)PR;KPSPQPS(0.049)S(0.951)PR;KPS(0.009)PQPS(0.144)S(0.847)PR;KPSPQPS(0.328)S(0.672)PR 107.99 0.00010524 1423016000.0 18041.019999999997 16926.16 18086.49 16698.41 20817.390000000003 18206.08 20465.29 20712.92 19132.63 20326.929999999997 20239.160000000003 True False 19872.531069303022 18352.58690556368 19313.947974299685 17729.832860859344 19355.248342496754 18057.815720686598 21244.107809986403 20299.78456162859 18328.552096613068 19043.484170784428 17749.871626605935 1.1195873123676767 1.0339560359441875 1.0881176146282263 0.9988710472859672 1.0904444127632147 1.0173490885206784 1.1968598002783766 1.1436581057409168 1.0326019524073475 1.0728801070447997 1.0 14.11552097012008 -8.957587320220345 9.924715859822719 1.0143294799106104 1.0834242692200893 0.11559446496153514 0.05678631477824776 0.4024456872612206 90.59804508020949 0.009562891097002823 0.010091520645301565 1.1025865230479013e-09 8.957587320220345 0.06909478930947888 KPSPQPSSPR ddPTM_A549_MK2206_60min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 0 54.486000000000004 0.019282 3545900.0 1148.6 1063.8 1369.5 1055.8 1456.7 1087.1 1078.3 1113.7 1562.8 1735.6 1736.6 False True 1342.4555994261264 1117.9428761428228 1563.7156930171654 1314.4710473966632 1242.4213596788218 1202.1362004414227 1274.2131522587213 1271.5703855632062 1208.8282952787824 1343.5267545734503 1305.3542922782476 1.0284224040686498 0.8564286973704788 1.1979243507048167 1.0069841231398595 0.9517886194026387 0.9209271441114447 0.976143534208498 0.9741189752736952 0.9260537943066802 1.0292429898311974 1.0 10.350225713175037 -6.6591359187371575 5.743031371104756 0.9618024457840654 1.0246715299108373 0.09779768354347129 0.07853482521629733 0.3367151168847042 16.18709471579168 0.01047244606383605 0.021988010538624626 2.1921187727201335e-07 6.6591359187371575 0.06286908412677195 KPSPQPSSPR ddPTM_A549_PD325901_60min_R1 2 KPSPQPSSPR 10 1 G3V5E1;O75909;O75909-1;O75909-4 G3V5E1 CCNK Cyclin-K 0 ; 80.014 0.0012315999999999998 14639800.0 3121.7 3778.2 3574.2 3432.8999999999996 3397.4 3700.8 3203.2 4027.6000000000004 3847.0 3773.1000000000004 3940.2999999999997 False True 3438.6126859259202 4096.602173594055 3816.7667054106123 3644.942436318427 3158.778344393727 3670.661911796328 3325.0995288582967 3947.2663584089246 3685.323968302865 3534.8658220787283 3455.6680796196783 0.9950645162380193 1.1854732801898369 1.1044945919200306 1.0547721460330703 0.9140861539981506 1.0622148387006864 0.9622161192125398 1.1422585350973147 1.066457739398531 1.0229182145490565 1.0 11.754748936514334 -12.818564298619084 0.007403225182330854 2.603281137312463e-05 2.0165161275629635 0.042317511838077415 0.07380184933574675 25358.764469628964 22.098929340043277 3232.056375778652 2800.6684300940706 1.518573096021591e-13 12.818564298619084 2.0164900947515902 KPSPS(ph)ESPEPWKPFPAVSPEPR ddPTM_A549_MK2206_60min_R1 1 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.171)PS(0.821)ES(0.008)PEPWKPFPAVSPEPR 108.75 6.848e-11 37437000.0 2508.4 2247.0 1954.4 1927.4 2684.0 2057.7 2090.8 1987.6 3403.7 2617.5 3333.9 True False 2931.756595508008 2361.3627022870137 2231.5633080925527 2399.613086524274 2289.1871554732998 2275.4444482092854 2470.6712962464367 2269.348386769714 2632.7673845920076 2026.204932067299 2506.000619040914 1.1698946014746148 0.9422833675080035 0.890487931701552 0.9575468849814746 0.9134822785276916 0.9079983583883287 0.9859021093107317 0.9055657726206906 1.0505852890010894 0.8085412735623184 1.0 11.291171055701408 -8.772550088212093 24.99480452441041 1.023887498622044 0.9539061590477238 0.0 0.09797066625715346 282.35391297925577 635185.5643845425 0.012315702187054314 0.01317096260295778 1.6883011324860797e-09 8.772550088212093 -0.06998133957432029 KPSPS(ph)ESPEPWKPFPAVSPEPR ddPTM_A549_PD325901_60min_R1 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.406)PS(0.556)ES(0.037)PEPWKPFPAVSPEPR;KPS(0.339)PS(0.651)ES(0.011)PEPWKPFPAVSPEPR 105.55 1.1298000000000001e-10 99276000.0 6935.5 6475.4 6311.2 6434.4 6803.1 6935.7 6044.799999999999 6553.6 8029.5 8032.299999999999 8019.9 True False 7639.586854354755 7021.1046834182725 6739.515984328648 6831.838274417342 6325.273725420892 6879.217958724005 6274.838171841481 6422.883306800261 7692.048038338408 7525.139207199106 7033.503142334807 1.08617095915859 0.9982372284954409 0.9582018871596653 0.9713279622065369 0.8993063054666078 0.9780642475749878 0.8921355468049903 0.9131841099410034 1.0936297151898327 1.0698991746950577 1.0 12.780027708990186 -8.76019599080396 24.999998575458164 1.0442140316123012 0.9595719315118919 0.35366879038524646 0.05509689172383701 30.98708228079836 623031.9531044257 0.010351427095068397 0.011426131825033216 1.7370167613597157e-09 8.76019599080396 -0.08464210010040929 KPSPSES(ph)PEPWKPFPAVS(ph)PEPR ddPTM_A549_PD325901_60min_R1 3 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 KPS(0.109)PS(0.126)ES(0.764)PEPWKPFPAVS(1)PEPR;KPS(0.249)PS(0.331)ES(0.437)PEPWKPFPAVS(0.984)PEPR;KPS(0.159)PS(0.308)ES(0.533)PEPWKPFPAVS(1)PEPR 65.093 0.0003299 19065400.0 5700.6 6394.6 6345.0 6100.5 7499.900000000001 7259.7 7518.8 7107.2 8694.6 7589.4 8158.5 True False 6279.320715440085 6933.495383850652 6775.609855584554 6477.314029759261 6973.132897250393 7200.57941014586 7804.932048445229 6965.441320509456 8329.196198285963 7110.203988784892 7155.056220992601 0.8776060622719988 0.9690343681029507 0.9469680805169959 0.9052778664065733 0.9745741587314921 1.006362380356942 1.0908274942055554 0.9734991739230751 1.1640993363334435 0.993731393461855 1.0 12.804747387662745 -7.368451210613125 1.4780230266435985 1.0720750401109287 0.9286387494301983 0.4320337658632839 0.05724072997829235 0.26090947560242606 1.1201838008878289 0.01076837679679944 0.02016933653220943 4.2810351076739154e-08 7.368451210613125 -0.14343629068073038 KPSPSES(ph)PEPWKPFPAVSPEPR ddPTM_A549_MK2206_60min_R1 3 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.003)PS(0.003)ES(0.993)PEPWKPFPAVSPEPR;KPS(0.278)PS(0.33)ES(0.392)PEPWKPFPAVSPEPR;KPS(0.004)PS(0.029)ES(0.967)PEPWKPFPAVSPEPR 142.32 1.8624e-27 76257000.0 9332.43 9577.6 7385.83 7535.74 13133.6 11106.6 9365.23 10446.42 15996.1 14837.6 15778.0 True False 10907.516027992662 10065.058930762829 8433.251753893375 9381.996638292218 11201.664837974722 12281.89304003561 11066.771065499346 11927.232025819518 12373.008890522731 11485.775854839256 11859.887149352875 0.919698129554953 0.8486639715886353 0.7110735243676858 0.7910696383653312 0.9445001201875628 1.035582622782862 0.9331261694259203 1.0056783741378448 1.0432653139703656 0.9684557458429077 1.0 13.53380266179057 -6.917084405090682 3.716434492385541 1.0128883613444872 0.8126554237123498 0.6920239732905501 0.055540742089361876 0.08911408748724163 2.425817637985447 0.008175027737215774 0.015973973389390876 1.210362876781762e-07 6.917084405090682 -0.20023293763213745 KPSPSESPEPWKPFPAVS(ph)PEPR ddPTM_A549_MK2206_60min_R1 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPSPSESPEPWKPFPAVS(1)PEPR;KPSPSESPEPWKPFPAVS(1)PEPR 79.762 2.4064000000000002e-05 12041900.0 3311.3 3736.1000000000004 3277.3 3124.7 4103.8 3620.2 3487.8999999999996 3385.8 4971.1 4547.6 4515.5 True False 3870.1664864876657 3926.251531826663 3742.070420390771 3890.251640273115 3500.136456270986 4003.2871611057294 4121.606281891117 3865.7475185776307 3845.1537872154827 3520.2940015546324 3394.1767285399224 1.1402371756147478 1.1567610781173507 1.1024972238262039 1.1461547089053874 1.0312180938723967 1.1794574888938765 1.2143169350124305 1.138935249326444 1.1328678777635595 1.0371569553094433 1.0 11.728845969975847 -10.473505468694214 0.7679961052984956 0.9982616922854313 1.1383099123672948 0.5103458301062651 0.04460849663681047 0.39064247659231516 0.40907427929597767 0.03165962102173741 0.008781729770099321 3.361201365506818e-11 10.473505468694214 0.14004822008186357 KPSPSESPEPWKPFPAVS(ph)PEPR ddPTM_A549_PD325901_60min_R1 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPSPSESPEPWKPFPAVS(1)PEPR;KPSPSESPEPWKPFPAVS(1)PEPR 99.536 2.6092e-08 23921000.0 4964.4 5315.8 5295.3 5939.200000000001 6275.8 6125.3 4687.7 6573.6 7184.1 6427.1 6823.0 True False 5468.382233401876 5763.781121801723 5654.670901225677 6306.050895098138 5835.009458334646 6075.41758763674 4866.092988707866 6442.484391110563 6882.177260380715 6021.291809144254 5983.814254560582 0.9138622959818867 0.9632286158295839 0.9449943899772544 1.053851377537657 0.9751321164234795 1.0153085188107807 0.8132092310517758 1.0766518005134273 1.1501321678117669 1.006263154735311 1.0 12.546849677437201 KPSQTAS(ph)YER ddPTM_A549_PD325901_60min_R1 2 KPSQTASYER 10 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 KPS(0.01)QT(0.241)AS(0.748)Y(0.001)ER;KPS(0.002)QT(0.421)AS(0.577)YER 49.482 0.012163 26663000.0 6257.6 6387.4 6203.0 6997.0 7822.5 5857.3 6530.5 6559.200000000001 7027.8 6533.2 6780.3 True False 6892.866945398353 6925.688614582249 6623.972881669186 7429.188798660033 7273.074586159976 5809.600090781629 6779.021751126718 6428.371610407147 6732.446005832824 6120.692637037112 5946.366083862978 1.1591729887105258 1.1646926066958643 1.113953091392249 1.2493662001101957 1.2231124830839746 0.9770000717829165 1.1400276497478636 1.081058838246138 1.132195009672055 1.0293164851802876 1.0 12.537792569151476 -7.246099775447102 24.997255214205392 1.066559505525542 1.1810502241695464 0.5327628545873524 0.05675981817049388 617.9628083155168 1007025.7461367828 0.009606623704600858 0.016598773340491493 5.674142318605841e-08 7.246099775447102 0.11449071864400451 KPSSET(ph)DIENWASK ddPTM_A549_MK2206_60min_R1 1 KPSSETDIENWASK 14 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 KPS(0.301)S(0.301)ET(0.398)DIENWASK 93.765 3.4787e-05 4000100.0 1541.2 1772.5 1511.7 1086.8 1929.5 1268.1 1159.6 1589.5 2003.5 2352.0 2043.7 True False 1801.3168812776821 1862.7126790403772 1726.0817912625419 1353.0660487883058 1645.673105993195 1402.289500303346 1370.2843098944745 1814.8164926395953 1549.7104489320711 1820.6815664650562 1536.192886749427 1.1725850944989438 1.2125512981523197 1.1236100662560145 0.8807917680515913 1.0712672348557915 0.9128342621547872 0.8920001659387878 1.1813728004428752 1.008799391208774 1.185190728436196 1.0 10.585143659110278 -6.03832767803084 7.168015716418458 1.000456939389284 1.1871499862114196 0.32848073786609444 0.09843188334228972 0.12802310091767993 20.13996183246433 0.010551953984592178 0.02884276149608897 9.155294564892535e-07 6.03832767803084 0.18669304682213572 KPST(ph)SDDSDSNFEK ddPTM_A549_PD325901_60min_R1 1 KPSTSDDSDSNFEK 14 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KPS(0.326)T(0.553)S(0.107)DDS(0.014)DSNFEK 130.27 6.085e-09 47642000.0 4680.0 4533.1 4312.5 4726.4 5001.6 4460.9 4413.2 5088.7 5216.7 4752.7 5653.0 True False 5155.110154766092 4915.120245915836 4605.17218316917 5018.338993566788 4650.304870583285 4424.571909406683 4581.146740995705 4987.201886492078 4997.460240562919 4452.613710899145 4957.716837319503 1.039815367420886 0.9914080225229851 0.9288897156254403 1.0122278375785703 0.9379932382539165 0.8924616016994878 0.9240436457586395 1.0059473039990152 1.0080164730152086 0.8981177943407005 1.0 12.275460158131692 -8.296546136446668 23.955848317454542 1.0040534679853024 0.959365332099998 0.0 0.0510443099905642 430.80471116607066 293967.4822331859 0.006705771733060683 0.008107064243715283 5.051889743014399e-09 8.296546136446668 -0.0446881358853044 KPSTS(ph)DDSDSNFEK ddPTM_A549_PD325901_60min_R1 1 KPSTSDDSDSNFEK 14 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KPS(0.242)T(0.242)S(0.509)DDS(0.007)DSNFEK 152.66 2.8581e-14 56343000.0 6985.4 8014.7 8316.4 7487.8 8695.3 9030.6 9003.5 8103.5 8970.8 8765.7 8631.8 True False 7694.552665620312 8690.1268965921 8880.800914575799 7950.304399972361 8084.572125156523 8957.057787685888 9346.133119404245 7941.869335427232 8593.78847279733 8212.232206036282 7570.143321488503 1.0164342125173063 1.1479474730583274 1.1731351095251898 1.0502184783483213 1.0679549622538544 1.1832084819663202 1.2346045144052218 1.0491042240750652 1.1352213700370934 1.0848185902537875 1.0 12.886104898907886 -10.736160181532414 0.8053247985187887 0.9933761284177282 1.121214317120075 0.10829529592161191 0.0680195514018189 0.6865418718280961 0.722887363905033 0.05628979638648703 0.011797720017917797 1.8358610948597153e-11 10.736160181532414 0.12783818870234687 KPSVGVPPPAS(ph)PSYPR ddPTM_A549_MK2206_60min_R1 2 KPSVGVPPPASPSYPR 16 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KPS(0.002)VGVPPPAS(0.673)PS(0.325)YPR;KPSVGVPPPAS(0.89)PS(0.11)YPR 84.166 5.3071e-05 85084000.0 6412.5 7852.9 7537.0 8005.2 11362.1 8440.6 8719.7 8390.400000000001 12355.3 13532.3 12049.400000000001 True False 7494.773229427162 8252.579067552144 8605.859933019632 9966.47435936708 9690.75014128286 9333.778689583174 10303.956620375013 9579.764894522335 9556.844277359827 10475.344031409473 9057.20143347779 0.8274932698001521 0.9111621429825386 0.9501676645072856 1.1003922605197205 1.0699497203919202 1.0305367235273228 1.137653467912162 1.0576959080442898 1.0551652569010141 1.1565762458025783 1.0 13.144849628339218 -5.81209019955655 1.987300847058047 1.0439573437186502 0.8443751523230097 0.68366701492825 0.05305102178313008 0.14923720087506953 1.0955196790490414 0.00652470586951814 0.03638168103639507 1.5413802871103067e-06 5.81209019955655 -0.19958219139564048 KPSVGVPPPAS(ph)PSYPR ddPTM_A549_PD325901_60min_R1 2 KPSVGVPPPASPSYPR 16 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KPSVGVPPPAS(0.807)PS(0.192)Y(0.001)PR;KPSVGVPPPAS(0.913)PS(0.087)YPR 72.167 0.00038573 80447000.0 8742.6 8834.099999999999 8491.4 8788.900000000001 9752.9 9184.7 10111.900000000001 10192.7 11411.0 10188.8 10451.0 True False 9630.14231603804 9578.580610276651 9067.677466936286 9331.770391959868 9067.889949678452 9109.902848377582 10496.713887944 9989.398602481535 10931.43535282141 9545.477429168512 9165.593254347446 1.0506840145312195 1.0450584424236058 0.9893170267658652 1.0181305380896757 0.9893402094160516 0.9939239714850483 1.1452301664123241 1.089880199270608 1.1926598802141242 1.0414467633768145 1.0 13.16201254866842 -7.74900091422336 24.999603381407017 1.0968883909250682 1.0136913022198824 0.380229229952325 0.05042479509783683 255.57500848780802 513669.2748640168 0.010965592445095398 0.016200803390619585 1.7823750154073474e-08 7.74900091422336 -0.08319708870518583 KPSVPDSASPADDS(ph)FVDPGER ddPTM_A549_PD325901_60min_R1 1 KPSVPDSASPADDSFVDPGER 21 1 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 KPSVPDSAS(0.005)PADDS(0.994)FVDPGER 80.729 6.1355e-05 5123900.0 1688.4 2457.8 2067.9 2198.3 2057.3 2222.6 2212.8 2392.5 1898.2 2408.9 2125.7 True False 1859.805125065613 2664.9274316498495 2208.240129292876 2334.083998298465 1912.802345299703 2204.499882500681 2297.0093148906208 2344.77971062006 1818.4252551683123 2256.8016428945534 1864.2523759225314 0.9976144587962681 1.4294885531960775 1.1845178033902848 1.2520214690049332 1.0260425948783605 1.182511504865202 1.2321343100093614 1.257758735299848 0.9754179630686851 1.2105665906837146 1.0 10.864381464850297 -8.768956539773551 24.992072882933897 0.9883917978915033 1.1997661532905273 0.10975713215034544 0.1283298269928019 106.56033127029636 354276.84043231985 0.017613340598246794 0.018928136284143884 1.7023288534001566e-09 8.768956539773551 0.21137435539902394 KPSVS(ph)EEVQATPNK ddPTM_A549_PD325901_60min_R1 1 KPSVSEEVQATPNK 14 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 KPS(0.139)VS(0.861)EEVQATPNK 235.02 1.2475e-57 92077000.0 5520.7 5554.9 6446.9 5891.1 5870.1 5908.3 5931.6 5922.2 7311.2 7739.8 7537.9 True False 6081.157399875466 6023.0309179232445 6884.425402359038 6254.979867341167 5457.80442674563 5860.1847636906205 6157.330283896068 5804.077075123973 7003.935689382872 7251.107707117467 6610.786086685064 0.91988415902969 0.9110914857847797 1.0413928558700631 0.9461779257900154 0.8255908382421144 0.8864580833274507 0.9314066743586952 0.8779707888013648 1.0594709309214616 1.0968601331272976 1.0 12.690606117050548 -8.764425851047621 24.999953382764605 1.0280834983308926 0.9187345413277553 0.5271323539958572 0.05551561725082121 52.0007710392165 435301.1539184075 0.009623492332112073 0.010464025217411282 1.7201810100210227e-09 8.764425851047621 -0.10934895700313729 KPT(ph)YDPVSEDQDPLSSDFKR ddPTM_A549_MK2206_60min_R1 2 KPTYDPVSEDQDPLSSDFKR 20 2 A0A5F9ZHD0;A0A5F9ZHP4;C9J1X3;A0A5F9ZI29;A0A5F9ZHJ2;Q07912;A0A5F9ZHK8;A0A5F9ZHC7;A0A5F9ZHX6;A0A5F9ZGY5 A0A5F9ZHD0 TNK2 Activated CDC42 kinase 1 1 KPT(0.539)Y(0.461)DPVSEDQDPLSSDFKR;KPT(0.522)Y(0.477)DPVS(0.001)EDQDPLSSDFKR 72.421 0.00019715 12750100.0 1530.71 2183.2 2100.29 1316.23 2345.7 1999.74 2208.8 1576.13 3074.3 2452.1000000000004 3286.8 True False 1789.0564257335604 2294.315554798844 2398.1427038240395 1638.7064090878098 2000.65063733 2211.35115948002 2610.1103688296967 1799.5512541956869 2377.9759586482965 1898.1689069425881 2470.596848934785 0.7241393619136706 0.9286482963774741 0.9706734244634107 0.6632836149671077 0.8097843394370856 0.895067586779065 1.056469561173068 0.7283872538619871 0.962510722732273 0.7683037836630435 1.0 11.270643896099918 -8.69689031128267 0.4996745332799917 1.0022277499379635 0.8304813141705231 0.0 0.13120933730518108 0.8420525905639525 0.49487562356648535 0.04284017971526206 0.04327500824876751 2.0096003084552275e-09 8.69689031128267 -0.17174643576744042 KPT(ph)YDPVSEDQDPLSSDFKR ddPTM_A549_PD325901_60min_R1 1 KPTYDPVSEDQDPLSSDFKR 20 2 A0A5F9ZHD0;A0A5F9ZHP4;C9J1X3;A0A5F9ZI29;A0A5F9ZHJ2;Q07912;A0A5F9ZHK8;A0A5F9ZHC7;A0A5F9ZHX6;A0A5F9ZGY5 A0A5F9ZHD0 TNK2 Activated CDC42 kinase 1 1 KPT(0.551)Y(0.449)DPVSEDQDPLSSDFKR 92.47399999999999 1.0637e-06 7042400.0 1712.5 1962.8 1673.2 1592.9 1882.9 2036.8 1735.0 1770.9 1909.1 1634.2 2022.5 True False 1886.3517393241302 2128.2120444472 1786.7534137689645 1691.2898152616226 1750.651599652365 2020.2129760988876 1801.0263744284305 1735.5780102558247 1828.867166074084 1531.0163331056838 1773.7453216838296 1.0634851104404337 1.1998408218079877 1.0073336864803037 0.9535133339526266 0.9869802492222831 1.1389532371992865 1.015380479041209 0.978482079156791 1.0310765270055382 0.8631545433209535 1.0 10.792583163793614 -5.781504512411248 24.974000796246425 1.0145769224803025 1.1316629651692807 0.33213353846771754 0.0700815536506954 135.85899451040243 169096.805044743 0.006961957314812413 0.021685512000421205 1.6538476008567328e-06 5.781504512411248 0.11708604268897815 KPTAEAS(ph)PVK ddPTM_A549_MK2206_60min_R1 3 KPTAEASPVK 10 1 Q6ZRI6;H3BMJ2;Q6ZRI6-2 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 1 KPT(0.034)AEAS(0.966)PVK;KPT(0.001)AEAS(0.999)PVK;KPT(0.006)AEAS(0.994)PVK 68.044 0.0017928 109254200.0 24621.6 27064.6 24897.1 23589.3 31652.8 27140.2 23752.6 25738.5 32484.7 35817.1 33196.3 True False 28777.124139674677 28442.072537746786 28427.88315488696 29368.679558963908 26996.71505021062 30012.15794979329 28068.139961365567 29387.011195850413 25126.967317406365 27725.99223394372 24952.74253872878 1.1532649805932207 1.1398375346358127 1.1392688844027652 1.1769720107271262 1.08191374187865 1.2027598931545047 1.1248519042666922 1.1777066649182657 1.0069821895692297 1.1111400757215613 1.0 14.606910769443822 -8.769445769835562 24.9980078664663 1.003297129512734 1.148511028250204 0.5129863202855238 0.044146560962892926 42.057578672411644 131314.24975037348 0.004561555992168068 0.004898081491124032 1.7004122701321259e-09 8.769445769835562 0.14521389873747004 KPTAEAS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 KPTAEASPVK 10 1 Q6ZRI6;H3BMJ2;Q6ZRI6-2 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 1 KPT(0.012)AEAS(0.988)PVK;KPT(0.172)AEAS(0.828)PVK 92.06299999999999 0.00026263 197830000.0 19824.7 20196.2 19432.0 18880.6 23614.3 22681.5 22055.4 20135.1 20326.8 21693.8 22937.3 True False 21837.288949827212 21898.204652570064 20750.772374108597 20046.811781046257 21955.713032912456 22496.789384027354 22894.73031617797 19733.48963481962 19472.535284351106 20324.04976571294 20116.157511524623 1.085559652101379 1.0885878498428192 1.0315475190637378 0.9965527347636527 1.091446665215956 1.118344264859671 1.138126419176301 0.9809770888657154 0.9680047132855873 1.0103345906925423 1.0 14.296067134569428 -8.288537402608911 24.360630378857653 0.9841753943362458 1.0760374748420327 0.559813738318601 0.037699954761631294 305.60296630152743 274730.6257674695 0.006651036054199295 0.008041808317968368 5.14591487102304e-09 8.288537402608911 0.09186208050578692 KPTGSLPS(ph)PSGVR ddPTM_A549_MK2206_60min_R1 4 KPTGSLPSPSGVR 13 1 G3V538;G3V3N9;G3V500;F8W717;A0A3B3IU69;O00423;O00423-3;G3V497;G3V4H6 G3V538 EML1 Echinoderm microtubule-associated protein-like 1 1 KPT(0.006)GS(0.006)LPS(0.962)PS(0.026)GVR;KPT(0.004)GS(0.004)LPS(0.97)PS(0.022)GVR;KPT(0.001)GS(0.041)LPS(0.916)PS(0.041)GVR;KPTGS(0.002)LPS(0.951)PS(0.047)GVR 59.728 0.0036634000000000002 31051400.0 3617.19 4365.7 4149.6 4310.0599999999995 5825.699999999999 4172.83 3831.73 3569.95 5771.1 5297.8 6145.3 True False 4227.683240195188 4587.895482587632 4738.075677067566 5366.024893485947 4968.747247258125 4614.396100899621 4527.90574228351 4076.0013450133533 4463.955064552967 4101.023300518102 4619.2524083482185 0.9152310517941472 0.9932116881718963 1.02572348471467 1.1616652261279579 1.0756604766343307 0.998948681080986 0.9802247944062072 0.8823941592035399 0.9663804161221873 0.8878110434291188 1.0 12.173443665731707 -7.500364342196367 4.802836030618842 0.974612429529923 1.0387990984090445 0.2367329860914693 0.06794800307458077 0.27647792371223623 16.606615103860555 0.010120594420857562 0.01588784679313742 3.1596258465145916e-08 7.500364342196367 0.0641866688791215 KPTGSLPS(ph)PSGVR ddPTM_A549_PD325901_60min_R1 4 KPTGSLPSPSGVR 13 1 G3V538;G3V3N9;G3V500;F8W717;A0A3B3IU69;O00423;O00423-3;G3V497;G3V4H6 G3V538 EML1 Echinoderm microtubule-associated protein-like 1 1 KPT(0.001)GS(0.004)LPS(0.73)PS(0.264)GVR;KPT(0.002)GS(0.002)LPS(0.982)PS(0.014)GVR;KPTGS(0.026)LPS(0.886)PS(0.088)GVR;KPTGSLPS(0.997)PS(0.003)GVR 130.61 3.3841e-08 198825500.0 12523.5 11512.9 13333.1 12179.699999999999 15808.500000000002 13496.599999999999 13528.900000000001 14173.1 14937.2 14988.5 14825.5 True False 13794.876500686565 12483.132487526062 14237.964344443573 12932.012406894339 14698.165496364341 13386.688164383468 14043.74969279815 13890.40640191814 14309.441429512239 14042.123552046587 13002.0574865877 1.0609764273782591 0.9600890090205387 1.0950547141581841 0.9946127695739219 1.1304492009457938 1.029582293278778 1.0801174896576953 1.0683237184766194 1.1005520814127436 1.0799924217018553 1.0 13.666452317482085 -5.76978753507144 24.99966532689108 1.0551240553435737 1.0105327112616591 0.14625210834518954 0.04591611204695419 270.6972955101113 810649.581371461 0.006687887004279015 0.021274214088256686 1.6990746680628496e-06 5.76978753507144 -0.04459134408191456 KPTGSLPSPS(ph)GVR ddPTM_A549_MK2206_60min_R1 1 KPTGSLPSPSGVR 13 1 G3V538;G3V3N9;G3V500;F8W717;A0A3B3IU69;O00423;O00423-3;G3V497;G3V4H6 G3V538 EML1 Echinoderm microtubule-associated protein-like 1 1 KPT(0.007)GS(0.093)LPS(0.377)PS(0.524)GVR 52.52 0.009996099999999999 27573000.0 1586.6 2503.5 2208.4 2278.2 2654.8 2366.7 2379.6 2477.8 3202.1 3241.1 3226.5 True False 1854.3792913542513 2630.917456686931 2521.5843274619265 2836.3591022722853 2264.2824367922944 2617.142623111687 2811.942517958686 2829.0357379442526 2476.8294627029595 2508.93325895829 2425.2710031301226 0.764607043485424 1.084793185294095 1.0397123967620523 1.1695019231300754 0.9336203805141562 1.0791134762811783 1.1594343536575973 1.166482316529996 1.0212588446842823 1.0344960442442064 1.0 11.243930249704963 -5.256249397742317 24.473589387703143 1.0441952847531508 0.7646068844964558 0.558865063985226 0.07484752721940723 258.4497703101066 1218677.442370979 0.010803580885905844 0.12517244712489903 5.543073052932312e-06 5.256249397742317 -0.27958840025669507 KPTS(ph)PVKPIPQNTEYR ddPTM_A549_MK2206_60min_R1 1 KPTSPVKPIPQNTEYR 16 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KPT(0.099)S(0.9)PVKPIPQNT(0.001)EYR 65.184 0.00059059 24324000.0 2462.6 2847.0 2610.1 2973.6 3156.1 2773.6 2611.9 2710.9 3730.9 3582.8 3800.8 True False 2878.2266752104997 2991.9001394798074 2980.2514277795576 3702.1321334899753 2691.8418708603904 3067.100511033327 3086.4484210187834 3095.178376783061 2885.85710702304 2773.442991637332 2856.9564632564575 1.007445059883691 1.047233368082038 1.0431560529916386 1.2958307839490693 0.9422061223124613 1.0735552153067605 1.0803274256061792 1.0833831094699533 1.0101158852570125 0.9707683779248305 1.0 11.480263336084226 -8.790869828067422 7.524060066727023 1.0046557809104826 1.0733991166694825 0.14840219070808303 0.08200965800164797 0.28524068210937537 55.8905962687384 0.013414943267179394 0.014373770573754231 1.6185651006212067e-09 8.790869828067422 0.06874333575899993 KPTS(ph)PVKPIPQNTEYR ddPTM_A549_PD325901_60min_R1 3 KPTSPVKPIPQNTEYR 16 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KPT(0.166)S(0.834)PVKPIPQNTEYR;KPT(0.072)S(0.928)PVKPIPQNTEYR;KPT(0.158)S(0.842)PVKPIPQNTEYR 82.36 4.2051e-05 102185600.0 7511.4 7875.999999999999 8692.7 8064.400000000001 9202.9 8735.5 8955.3 9420.2 9265.599999999999 9395.5 9334.5 True False 8273.951798399581 8539.7381608244 9282.638895451519 8562.519672418748 8556.520052281456 8664.360984245799 9296.098842028194 9232.306720996059 8876.199053991946 8802.266526553944 8186.415676270815 1.0106928508874156 1.0431596071498943 1.1339075930823084 1.0459424503984216 1.045209575306984 1.0583827314511232 1.135551773772484 1.1277593376741017 1.0842595105108748 1.0752283874453428 1.0 12.999016208084806 -10.609388426293608 0.9967394758819492 1.0020218956727966 1.0772576021515226 0.007703222150018951 0.044957100510295764 0.48639080034523885 0.8944875849639177 0.024256824394257023 0.007359780495400562 2.4581680730284018e-11 10.609388426293608 0.0752357064787259 KPTSAKPSSTT(ph)PR ddPTM_A549_PD325901_60min_R1 1 KPTSAKPSSTTPR 13 2 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KPTS(0.001)AKPS(0.025)S(0.025)T(0.243)T(0.704)PR 48.216 0.011378000000000001 252040000.0 2668.1 2713.9 2592.1 1969.6 3535.4 2440.9 2146.7 2489.0 3017.3 3381.1 2768.1 True False 2938.9635478485907 2942.6098774328802 2768.0154935635514 2091.2577187138486 3287.0857004678805 2421.022119677815 2228.3938432193127 2439.3549424172725 2890.4933739433945 3167.616768977863 2427.64124843165 1.2106251488959805 1.212127154015825 1.140207802677515 0.8614360627069101 1.3540244888290083 0.9972734320781083 0.9179255150071869 1.0048251338591276 1.1906591947268834 1.3048125504640629 1.0 11.24533952365712 -6.0019552368608196 23.30972397771249 1.0709312482626403 1.2025741603545068 0.10975945758267902 0.14505761459441124 47.21330129364595 562948.506224617 0.017801549803390312 0.054009653974230916 9.95508020008166e-07 6.0019552368608196 0.13164291209186652 KPVKENQSEGKGS(ph)DSDSEGDNPEK ddPTM_A549_PD325901_60min_R1 1 KPVKENQSEGKGSDSDSEGDNPEK 24 3 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 KPVKENQS(0.009)EGKGS(0.491)DS(0.425)DS(0.075)EGDNPEK 67.459 6.6734e-05 7112800.0 709.42 398.1 568.0 845.02 782.1 983.76 713.61 1225.3 748.71 739.01 845.4 True False 781.4397961525985 431.6492841320715 606.5478956614699 897.2149662203376 727.1679940985264 975.7485847245882 740.7668190523754 1200.8604302707454 717.2443224091601 692.3487824797647 741.4211594321436 1.05397557948185 0.5821917524753041 0.8180881917721724 1.2101286223170606 0.9807758854029285 1.3160517100320102 0.9991174511659886 1.619673804818961 0.9673912233075455 0.933813088110456 1.0 9.534149478619705 -6.1644786573557715 7.225547571726398 1.0660234343669375 0.7908423058199229 0.2449090116399969 0.2228351932368419 0.3054069287066168 19.91314397504668 0.030351886009242178 0.08099569317492794 6.847331322788583e-07 6.1644786573557715 -0.2751811285470146 KPVKENQSEGKGSDS(ph)DSEGDNPEK ddPTM_A549_MK2206_60min_R1 1 KPVKENQSEGKGSDSDSEGDNPEK 24 3 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 KPVKENQS(0.038)EGKGS(0.038)DS(0.914)DS(0.009)EGDNPEK 63.901 0.00010049 3102100.0 467.16 551.63 590.55 335.45 655.2 411.22 357.3 299.19 674.68 785.1 688.15 True False 546.0051870345723 579.7056107977677 674.2988700337986 417.6352650589226 558.8209479381919 454.73502745425606 422.2167850338875 341.60109873094706 521.8660572425702 607.745364724369 517.2633630261872 1.0555651647938769 1.1207165483483492 1.3035890771171073 0.8073938633805371 1.080341249511423 0.8791170223111944 0.8162510922168523 0.6604007226269628 1.008898163963238 1.174924435337596 1.0 9.014755201049153 -6.261897368033 24.999955364824277 0.952264088249746 1.1560328869102718 0.3238656826548214 0.1460395434355581 38.77963409854337 2116928.657279736 0.01932915683598945 0.04764458615390572 5.47145248345988e-07 6.261897368033 0.20376879866052588 KPVKENQSEGKGSDS(ph)DSEGDNPEK ddPTM_A549_PD325901_60min_R1 1 KPVKENQSEGKGSDSDSEGDNPEK 24 3 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 KPVKENQS(0.004)EGKGS(0.021)DS(0.799)DS(0.175)EGDNPEK 81.34100000000001 2.656e-06 26775000.0 342.81 313.07 371.98 517.08 577.35 381.69 299.25 636.7 363.93 271.92 542.34 True False 377.61181883661635 339.45350761926056 397.2247996974539 549.0188572261159 536.7989277493721 378.581643188916 310.6381225058835 624.0005190185124 348.6352877006657 254.75092479384256 475.6356181765186 0.7939098848069794 0.7136839518466888 0.8351451920701936 1.1542845746727974 1.1285927866532368 0.7959488918014888 0.6531010518026406 1.3119297528868672 0.732988183343493 0.5356010253616015 1.0 8.893712945738326 -6.001385491353535 23.633234843037123 0.917316555804721 0.7589511944238847 0.07485379168893724 0.21967796383664934 48.32042273261337 824381.9314517832 0.026758651279514444 0.08143347606320381 9.968148715812852e-07 6.001385491353535 -0.15836536138083634 KPVTVS(ph)PTTPTSPTEGEAS ddPTM_A549_MK2206_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVT(0.007)VS(0.927)PT(0.066)TPTSPTEGEAS 144.33 9.721399999999999e-21 17979000.0 678.04 763.85 565.75 771.78 950.63 930.0 758.85 848.88 1106.0 1440.0 1013.4 True False 792.4765755135736 802.7267023328587 645.9818571189935 960.8661346465211 810.7935862919466 1028.411982715963 896.7232222864973 969.2113395859704 855.492765919077 1114.7029998765652 761.74481158285 1.0403439097495988 1.053800026106973 0.848029218310907 1.2614016138159334 1.0643900345145465 1.3500741548590243 1.1771963637312763 1.2723569952147362 1.1230700267474425 1.4633548964518626 1.0 9.573163958195925 -6.259766581779795 24.998507489130883 1.115277418484127 0.9880319603947435 0.13127303079437203 0.1563066825549838 217.43322811697706 3249310.6462608175 0.01831405851481079 0.04586051440178125 5.49836312402974e-07 6.259766581779795 -0.12724545808938348 KPVTVS(ph)PTTPTSPTEGEAS ddPTM_A549_PD325901_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVT(0.007)VS(0.678)PT(0.312)T(0.003)PTSPTEGEAS 214.54 2.0222999999999995e-66 142790000.0 2587.5 2319.2 2971.7 2638.8 2825.9 3145.5 3121.1 2999.8 2451.6 3051.4 3289.3 True False 2850.181095183176 2514.647123233107 3173.377432283785 2801.7926828503787 2627.4185328257568 3119.8840908871994 3239.875168431454 2939.9666357024257 2348.5677776686507 2858.734083244818 2884.7369525906656 0.9880211409305598 0.871707599188482 1.1000578161672256 0.9712471982355971 0.9108000403524413 1.0815142393088415 1.123109393222787 1.0191454832864952 0.8141358523381125 0.9909860518400142 1.0 11.494224056047631 -8.708711755864957 24.999201116620746 0.9122305438004034 1.0085082791398676 0.11156868276443777 0.08557597031059262 126.95746610246037 60192.73271962558 0.016392259487079903 0.018587066973543592 1.9556369944104812e-09 8.708711755864957 0.09627773533946427 KPVTVSPT(ph)TPTS(ph)PTEGEAS ddPTM_A549_MK2206_60min_R1 2 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 2 KPVT(0.008)VS(0.385)PT(0.515)T(0.092)PT(0.017)S(0.855)PT(0.085)EGEAS(0.044);KPVT(0.01)VS(0.394)PT(0.502)T(0.094)PT(0.068)S(0.411)PT(0.321)EGEAS(0.201) 66.965 0.002734 9256700.0 935.87 378.96 743.4100000000001 614.01 831.0999999999999 624.61 562.75 782.66 979.6700000000001 1060.8600000000001 943.8599999999999 True False 1093.821976175283 398.2474453309684 848.8367165723927 764.4424775639568 708.8462909515123 690.7058156174384 664.9943906460124 893.6044517957254 757.7763092115205 821.2109892007321 709.4735127892135 1.5417375792861494 0.5613281372060027 1.196431862882786 1.0774785299011926 0.9991159333979427 0.9735470079806192 0.937306860169682 1.259531801663211 1.0680825930095827 1.157493513707419 1.0 9.470605014045113 -5.206362659045827 23.391968618705032 1.0262987483639925 1.5417452190902725 0.4231823520989513 0.17405609858378315 21397.864520501007 9087360.721375762 0.020413746866100074 41.973146522342745 6.217808481634772e-06 5.206362659045827 0.51544647072628 KPVTVSPT(ph)TPTS(ph)PTEGEAS ddPTM_A549_PD325901_60min_R1 2 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 2 KPVT(0.001)VS(0.063)PT(0.631)T(0.298)PT(0.05)S(0.55)PT(0.378)EGEAS(0.03);KPVT(0.03)VS(0.289)PT(0.436)T(0.289)PT(0.036)S(0.517)PT(0.337)EGEAS(0.068) 73.983 0.0008173999999999999 20789500.0 944.05 1462.4 2120.06 1244.32 1359.1399999999999 1499.55 1526.02 1188.2 1577.93 1814.21 1448.6 True False 1039.8892610271212 1585.6415802932456 2263.9400205564384 1321.1788203442406 1263.6786951784568 1487.3381619742174 1584.0935261701864 1164.500418875132 1511.6150894993855 1699.6604709849848 1270.4313834319892 0.8185324092182978 1.2481127284574285 1.7820246335859156 1.0399450435293565 0.9946847280840226 1.1707347451983345 1.2468942021023277 0.9166181141789087 1.1898439453029364 1.3378608976058672 1.0 10.31110274155224 KPVTVSPT(ph)TPTSPTEGEAS ddPTM_A549_MK2206_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVT(0.003)VS(0.306)PT(0.69)T(0.001)PTSPTEGEAS 138.39 1.1144000000000002e-16 16405000.0 831.7 1249.3 1233.6 657.15 1264.6 769.5 1175.2 1075.1 1380.4 1364.7 1260.2 True False 972.0706268872623 1312.8840338082623 1408.5430295041804 818.1517795005842 1078.5790152054904 850.9279792472395 1388.718627964804 1227.4987173556644 1067.7416040458352 1056.4133221746865 947.257560249366 1.026194635629368 1.385984223195479 1.4869694248028813 0.8637057267563063 1.1386333141765097 0.8983068755062059 1.4660412186092484 1.2958447299512974 1.1271924858163727 1.1152334555098038 1.0 9.887612938988246 -9.67339576827804 1.1447691118387202 1.0248509443053508 1.1939864600646293 0.053907697129965126 0.20174683850801317 0.6982449371264059 1.878127544725782 0.05635382225868955 0.038764741309555685 2.1213104516190693e-10 9.67339576827804 0.16913551575927843 KPVTVSPT(ph)TPTSPTEGEAS ddPTM_A549_PD325901_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVT(0.005)VS(0.267)PT(0.727)T(0.002)PTSPTEGEAS 147.64 2.4495e-20 120610000.0 1072.3 1000.3 1137.8 1340.3 1220.6 1128.8 1350.7 1342.7 942.79 1009.1 1507.1 True False 1181.1591066144613 1084.5987915531553 1215.0179501472198 1423.0872869578461 1134.8692668414026 1119.6074270524466 1402.1016276313997 1315.9187951722274 903.1678149405396 945.3852537859171 1321.7362542940425 0.8936420581467175 0.8205863976489427 0.9192590020890193 1.0766802244657627 0.8586200636885396 0.8470732518799254 1.060802881873193 0.9955986233237415 0.6833192416462345 0.7152601365927277 1.0 10.36821860781375 KPVTVSPTT(ph)PTSPTEGEAS ddPTM_A549_MK2206_60min_R1 2 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVT(0.058)VS(0.274)PT(0.274)T(0.31)PT(0.038)S(0.044)PT(0.001)EGEAS(0.001);KPVTVS(0.001)PT(0.011)T(0.892)PT(0.087)S(0.009)PTEGEAS 112.5 6.956799999999999e-10 117785000.0 1180.8700000000001 1490.19 1255.4299999999998 988.3100000000001 1605.8799999999999 1402.7 937.51 1321.96 1740.92 2175.19 2267.92 True False 1380.171986500375 1566.0343058838828 1433.4688517594302 1230.4459943669217 1369.657179296372 1551.1327829630977 1107.8434316739988 1509.3518783327074 1346.604399677974 1683.8130682649362 1704.7328725922418 0.8096118803655526 0.9186391199827971 0.8408759371077748 0.7217822886795674 0.8034438716569425 0.9098978543215527 0.6498633595241206 0.8853890850579803 0.7899210611398064 0.9877283974142561 1.0 10.735329974891481 -10.74648451410612 0.8240417480037551 1.0095306071570767 0.8135044961274897 0.45650598979209267 0.07534888629469853 0.4962929583006175 0.5504713734361443 0.06327983131216472 0.013380329441549927 1.792732475742575e-11 10.74648451410612 -0.196026111029587 KPVTVSPTT(ph)PTSPTEGEAS ddPTM_A549_PD325901_60min_R1 3 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVS(0.002)PT(0.041)T(0.805)PT(0.128)S(0.022)PT(0.001)EGEAS(0.001);KPVTVS(0.002)PT(0.009)T(0.721)PT(0.24)S(0.029)PTEGEAS;KPVTVSPT(0.014)T(0.879)PT(0.095)S(0.011)PTEGEAS 119.45 1.3114e-13 175208000.0 2864.52 3712.04 4040.7999999999997 3633.12 4526.83 4671.31 3475.17 3170.1 3731.3799999999997 3885.4700000000003 3618.79 True False 3155.3239616518313 4024.8666382055117 4315.0329873043465 3857.529570985817 4208.881077515701 4633.268400127893 3607.4194960359914 3106.869868604658 3574.5630748234853 3640.1407611015425 3173.7017713998644 0.9942093457193595 1.268193084326954 1.3596214446453994 1.2154669369845448 1.3261740959545916 1.4598940712958797 1.1366598867431774 0.9789419713605517 1.1263071744913222 1.1469700127167084 1.0 11.63195085104029 -7.990546544615206 24.93618254974318 1.0553799209720403 1.2765286285248163 0.41432703267082327 0.11631590176212234 136.292798667387 359509.3837329169 0.01775880568508364 0.024521147272026325 1.0220060233431726e-08 7.990546544615206 0.22114870755277605 KPVTVSPTTPT(ph)SPTEGEAS ddPTM_A549_PD325901_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVS(0.002)PT(0.016)T(0.15)PT(0.793)S(0.031)PT(0.006)EGEAS(0.002) 75.73899999999999 0.0013579 11840000.0 641.63 807.98 1094.0 844.52 1116.9 908.22 1192.3 1023.0 709.74 1265.5 1113.0 True False 706.7678052569587 876.0713102060568 1168.2454187564238 896.6840823559206 1038.452797095824 900.8237574393819 1237.6736289515943 1002.5954624720256 679.9120959873346 1185.5961140284192 976.108055888309 0.7240671778021167 0.8975146807991318 1.196840259343275 0.9186319864350383 1.0638707372932992 0.92287298727351 1.26796784586031 1.0271357319755052 0.6965541282912365 1.2146156430903188 1.0 9.930897053818235 -8.703006996468687 24.99945545222553 0.8567052935386746 1.0108136760860305 0.0 0.188146125513296 111.96394360145388 47901.74132139406 0.028985160103655924 0.03286607541227356 1.981495103732183e-09 8.703006996468687 0.15410838254735582 KPVTVSPTTPTS(ph)PTEGEAS ddPTM_A549_MK2206_60min_R1 2 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVSPTTPT(0.022)S(0.942)PT(0.018)EGEAS(0.018);KPVTVS(0.001)PT(0.006)T(0.031)PT(0.256)S(0.664)PT(0.021)EGEAS(0.021) 94.461 2.4434e-06 112476000.0 1220.7 1420.5300000000002 1495.1399999999999 940.41 1972.49 1229.1 883.11 1267.35 1875.01 1408.43 1934.74 True False 1426.724316750369 1492.8289094257996 1707.173334251686 1170.8104922166094 1682.339333941702 1359.1625461894507 1043.5596558390048 1447.0007435965958 1450.3232287757032 1090.2646848028833 1454.2906618924444 0.9810448173364438 1.026499687128023 1.1738872970759293 0.8050732380369224 1.1568109305965713 0.9345879622308755 0.7175729606081894 0.9949873030977436 0.9972719118531791 0.7496882936621073 1.0 10.506099927071354 -3.8252696385168328 8.053953406952255 0.9872309761834346 0.9729352174663927 0.0 0.14478729606563479 0.0 0.0 0.015210511416095786 0.0 0.00014953069831225433 3.8252696385168328 -0.014295758717041918 KPVTVSPTTPTS(ph)PTEGEAS ddPTM_A549_PD325901_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVS(0.002)PT(0.01)T(0.062)PT(0.421)S(0.47)PT(0.015)EGEAS(0.02) 61.703 0.001118 7708800.0 2061.9 2097.7 2197.6 2125.5 3136.0 2462.5 2056.5 2628.0 2946.7 2581.9 2493.2 True False 2271.222570109446 2274.4805408787915 2346.7423512423366 2256.78730763926 2915.7381786126793 2442.4462164392726 2134.7612328599803 2575.582478373883 2822.860446425278 2418.8783933701907 2186.552205696971 1.0387232302031801 1.040213233854068 1.0732615233827927 1.032121392646969 1.3334866512749362 1.1170308260079864 0.9763138640357858 1.177919498863695 1.2910098551822509 1.1062522939392452 1.0 11.094442078999796 KPVVPSVPMAS(ph)PAPGR ddPTM_A549_PD325901_60min_R1 1 KPVVPSVPMASPAPGR 16 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 KPVVPS(0.008)VPMAS(0.992)PAPGR 43.955 0.015696 3693400.0 1935.2 1990.4 2344.8 2694.3 2997.3 2311.3 2725.2 3024.7 3760.8 2625.9 2885.7 True False 2131.660079381056 2158.1379933094067 2503.9322284278437 2860.720791800733 2786.7799881236565 2292.4775391090725 2828.908977286659 2964.369985668752 3602.7466545342904 2460.1002258611015 2530.7771939594713 0.842294645482408 0.8527570101629294 0.9893926001879177 1.1303724399875186 1.1011558009828837 0.9058393384375444 1.1178024616464763 1.1713279196383592 1.4235732260956933 0.9720730184122635 1.0 11.305364784872854 -5.89988443923994 0.5434821835451326 1.1889619016101345 0.7138923653078649 0.2695022826264787 0.1370548956913708 1.9578767978047693 0.5784282671549007 0.03329408145220796 0.5130825398909963 1.2592604419196204e-06 5.89988443923994 -0.47506953630226956 KPVVS(ph)TISK ddPTM_A549_MK2206_60min_R1 3 KPVVSTISK 9 1 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 KPVVS(0.631)T(0.348)IS(0.021)K;KPVVS(0.974)T(0.026)ISK;KPVVS(0.777)T(0.221)IS(0.002)K 90.61399999999999 0.000442 51431800.0 7997.1 12252.0 11441.4 9525.5 13851.5 10931.7 8574.3 10133.099999999999 14683.0 14715.2 13311.3 True False 9346.814969676718 12875.574467476847 13063.962563042416 11859.247927615943 11813.9626989711 12088.485238124824 10132.139322463087 11569.497956317251 11357.323943932908 11391.026099849756 10005.736836809547 0.9341455928853977 1.2868192195610837 1.305647227796571 1.185244837140591 1.1807189107262317 1.20815542476124 1.0126330012187132 1.1562864529631511 1.1350812168226414 1.1384495000851858 1.0 13.288539792836938 -10.508101292066142 0.2929003759363513 0.9348513251788729 1.1935095232711659 0.04081115435634253 0.10883303646061634 3.389928974900789 0.41737702965361273 0.29979933261690966 0.05558381961635301 3.103835584948647e-11 10.508101292066142 0.25865819809229296 KPVVS(ph)TISK ddPTM_A549_PD325901_60min_R1 3 KPVVSTISK 9 1 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 KPVVS(0.496)T(0.496)IS(0.007)K;KPVVS(0.717)T(0.266)IS(0.017)K;KPVVS(0.978)T(0.022)ISK 123.95 3.917e-05 114826000.0 16771.600000000002 19071.5 22573.9 20842.6 24987.0 23005.8 24393.0 25210.8 22494.600000000002 25908.1 31691.2 True False 18474.240485400638 20678.722236435075 24105.90060188813 22130.00006502097 23231.99932047037 22818.448392348677 25321.28896336176 24707.95081650999 21549.230189078673 24272.258144496005 27793.383307068798 0.6646992300754552 0.7440160130190331 0.8673251592136026 0.7962326795742266 0.8358823776075397 0.8210029034696604 0.9110545730832884 0.8889867974521087 0.7753367033799723 0.8733106680942564 1.0 14.762453845006576 -14.999999999999998 0.22286065852435621 1.9909673972622148 0.7833720686927299 0.29949283907068003 0.07180857209844804 26.834648613993906 0.33176237394209407 11.727089678977983 0.04449344110363734 1.000000000000004e-15 14.999999999999998 -1.207595328569485 KPVVST(ph)ISK ddPTM_A549_MK2206_60min_R1 1 KPVVSTISK 9 1 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 KPVVS(0.022)T(0.899)IS(0.079)K 93.62299999999999 0.00059977 31700000.0 3060.4 3848.6 3689.1 3448.7 5150.2 3902.1 3317.7 2637.2 5398.3 5223.5 5164.9 True False 3576.9207004037235 4044.4773013003073 4212.269852580963 4293.631654818024 4392.612402428684 4315.017631995652 3920.4831449956 3011.0311760862787 4175.5936693137 4043.507722121695 3882.3127860117056 0.9213375885867993 1.0417700799051777 1.0849898204385076 1.1059468650460968 1.1314421697951875 1.1114554312942062 1.009831860823122 0.7755766580516833 1.0755428270382308 1.0415203372306292 1.0 11.922700640902574 -7.790005625353054 24.25058688405296 1.0111720950710839 1.0706806706854952 0.14348998265577617 0.09077374833694389 312.8438430429497 265579.5202057591 0.01498912781448421 0.020712934504640984 1.621789090425437e-08 7.790005625353054 0.05950857561441136 KPVVST(ph)ISK ddPTM_A549_PD325901_60min_R1 1 KPVVSTISK 9 1 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 KPVVS(0.094)T(0.813)IS(0.094)K 122.46 6.984600000000001e-05 77731000.0 8376.4 9766.5 11612.0 10955.0 11289.0 11632.0 12253.0 13366.0 11988.0 12597.0 13951.0 True False 9226.765961620235 10589.557230534727 12400.0601486285 11631.665469389844 10496.099584935768 11537.272848577308 12719.294620098868 13099.404644575841 11484.186049392973 11801.623270182528 12235.11544267547 0.7541216921777246 0.8655052974489217 1.0134812545681189 0.9506788492423355 0.8578668206370901 0.9429639550711454 1.0395729145092172 1.0706400528830136 0.9386250667759707 0.964569833891314 1.0 13.578740093372938 -7.5212990774256125 24.30909752711691 0.9843275468102054 0.8977728904171289 0.36716177202443345 0.06920551329868978 47.47105007422701 730523.3185876458 0.011129685887108384 0.016647707304501214 3.0109318281868514e-08 7.5212990774256125 -0.08655465639307647 KPYCNAHYPK ddPTM_A549_PD325901_60min_R1 1 KPYCNAHYPK 10 1 C9J9W2;Q14847;Q14847-2;F6S2S5;O76041-2 C9J9W2 LASP1 LIM and SH3 domain protein 1 0 66.435 0.0015952 2336600.0 2739.8 2899.4 2395.8 2588.9 2943.0 2793.6 2135.0 2625.2 2622.6 2754.1 2820.4 False True 3017.9424790658422 3143.742613445186 2558.393395115757 2748.810473181501 2736.2938327988268 2770.8498478151273 2216.2485933168273 2572.8383265704397 2512.3812423371705 2580.2056559823523 2473.5086799886662 1.2201058777281795 1.2709648601110188 1.0343175327476433 1.11130011203118 1.1062398345055997 1.1202102787154251 0.895993861370635 1.0401573875140913 1.01571555526083 1.0431358809681537 1.0 11.272343246844951 -4.99559451062502 0.4166138947509141 1.0019320141499322 1.500329039852008 0.5744723295131727 0.06486463777628294 2.8361122659448395 0.27885047986065475 0.013805090029896652 0.7333131911201992 1.0101956390874957e-05 4.99559451062502 0.4983970257020758 KPYRIES(ph)DEEEDFENVGK ddPTM_A549_MK2206_60min_R1 4 KPYRIESDEEEDFENVGK 18 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KPYRIES(1)DEEEDFENVGK;KPYRIES(1)DEEEDFENVGK;KPYRIES(1)DEEEDFENVGK;KPYRIES(1)DEEEDFENVGK 184.96 3.3222999999999996e-40 220171000.0 13417.8 15379.400000000001 14257.199999999999 12595.9 18254.100000000002 15422.1 14508.9 14210.1 19266.6 20866.9 23618.0 True False 15682.396606285822 16162.145769271421 16279.085343909699 15681.896065451438 15568.94607106005 17054.056385638545 17144.97932375642 16224.425191606113 14902.745862438042 16153.052797308545 17752.99877636052 0.8833660613534281 0.9103896177130681 0.9169766499159877 0.883337866633162 0.8769755615480184 0.9606296153384142 0.9657511691256507 0.9138977248852278 0.839449495275254 0.909877424135103 1.0 14.115775119905916 -7.243698064473593 24.398086818181007 0.9273036546172209 0.8957689691314493 0.17496691083835947 0.03977256111282828 1527.7673351975227 2101004.620433288 0.00882501685613975 0.015263568869183926 5.7056080669194116e-08 7.243698064473593 -0.03153468548577154 KPYRIES(ph)DEEEDFENVGK ddPTM_A549_PD325901_60min_R1 5 KPYRIESDEEEDFENVGK 18 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KPYRIES(1)DEEEDFENVGK;KPYRIES(1)DEEEDFENVGK;KPYRIES(1)DEEEDFENVGK;KPYRIES(1)DEEEDFENVGK;KPYRIES(1)DEEEDFENVGK 196.18 5.533399999999999e-49 375067000.0 20736.7 21842.399999999998 21980.1 23085.399999999998 25127.1 23693.800000000003 24102.800000000003 24514.899999999998 24355.300000000003 24089.1 28571.0 True False 22841.87451844831 23683.135703909466 23471.801763078674 24511.332727252582 23362.259179789115 23500.845548454352 25020.04524355823 24025.93108793298 23331.731438837203 22568.11011492847 25056.948126491337 0.9115984278348267 0.9451723962692242 0.936738250986888 0.9782249858807862 0.9323665061623957 0.9378973620338144 0.9985272395206785 0.9588530481304577 0.9311481717986974 0.9006727395930729 1.0 14.612923088267564 -8.788993994160457 0.006657428554568654 1.9182132937380654 2.8800302857283823e-07 0.0 0.033090773943673435 1912.551287893201 9.986238741272015 1442.1355927976842 1434.4392927663162 1.6255712355491195e-09 8.788993994160457 -1.9182130057350368 KQALYLMFDT(ph)SQESPVKSSPVR ddPTM_A549_MK2206_60min_R1 2 KQALYLMFDTSQESPVKSSPVR 22 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KQALY(0.001)LMFDT(0.338)S(0.291)QES(0.251)PVKS(0.06)S(0.06)PVR;KQALY(0.001)LMFDT(0.3)S(0.3)QES(0.259)PVKS(0.07)S(0.07)PVR 40.756 0.044286 9814100.0 2431.7 3672.9 3513.5 3209.0 4165.1 3622.7 3893.3 3210.3 4839.4 5013.9 4503.6 True False 2842.111510642966 3859.8349217756877 4011.767132103549 3995.205144057482 3552.4193074746086 4006.051709446363 4600.662214308523 3665.3698561314177 3743.283626933794 3881.2565076952155 3385.231826963214 0.8395618545251997 1.1401981072706104 1.185078995225677 1.1801865716362048 1.049387306115863 1.183390655120972 1.3590390405952297 1.0827529822143693 1.1057687680703916 1.146526059687017 1.0 11.725038920281515 -9.996490915444296 0.8681000815802086 1.0106125264351766 1.134539192144505 0.0 0.12544135928355327 0.7711558146344704 1.1773713198739868 0.048302983304302716 0.023388332064030706 1.0081126968073701e-10 9.996490915444296 0.12392666570932831 KQALYLMFDT(ph)SQESPVKSSPVR ddPTM_A549_PD325901_60min_R1 1 KQALYLMFDTSQESPVKSSPVR 22 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KQALYLMFDT(0.217)S(0.217)QES(0.189)PVKS(0.189)S(0.189)PVR 54.744 0.0033412 9316800.0 2387.9 2232.2 2418.4 3123.1 2950.5 3322.6 3346.9 2958.0 3248.5 2881.3 3323.9 True False 2630.317850120931 2420.3153279065796 2582.5271670205993 3316.006793925275 2743.2670586724216 3295.5418472045176 3474.268110993954 2899.0003694938914 3111.976841963049 2699.374226274265 2915.0813719381376 0.9023136971206134 0.8302736764762745 0.8859194092765807 1.137534898972846 0.9410601999245453 1.1305145300329729 1.191825430479847 0.9944835150747252 1.0675437303124071 0.9260030448067882 1.0 11.509320440215857 -6.155312667742972 6.562871692324834 1.0473740613218945 0.8651170329301826 0.49044507625098666 0.07985165139842205 0.1369399613939602 7.339920189470218 0.009837929591499846 0.026369832479997135 6.993383302248506e-07 6.155312667742972 -0.18225702839171187 KQALYLMFDTS(ph)QESPVK ddPTM_A549_PD325901_60min_R1 1 KQALYLMFDTSQESPVK 17 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KQALYLMFDT(0.07)S(0.536)QES(0.394)PVK 123.53 1.2711e-10 5651200.0 3149.2 2856.5 3327.5 3449.9 3759.3 3984.1 3547.1 3430.0 3809.1 3647.7 3811.5 True False 3468.904465681489 3097.2272798876215 3553.3241598829977 3662.9924877086264 3495.2597368809497 3951.654810524146 3682.0868315475955 3361.585959217054 3649.0167735020646 3417.383599479622 3342.7096630892056 1.03775224752115 0.9265618591072254 1.0630071163880712 1.095815328550978 1.0456366508513226 1.1821711152957797 1.1015275637623732 1.0056470043857784 1.0916343748890778 1.0223393426042886 1.0 11.706802337250785 -5.790231529918397 24.615775633286923 1.05936052827496 0.9821570381339869 0.2532688974749776 0.05509804131858581 179.4642437222961 153432.56044456834 0.00816068116902521 0.025379349367597975 1.6209457127056736e-06 5.790231529918397 -0.07720349014097316 KQALYLMFDTSQES(ph)PVK ddPTM_A549_MK2206_60min_R1 3 KQALYLMFDTSQESPVK 17 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KQALYLMFDTSQES(1)PVK;KQALYLMFDT(0.003)S(0.202)QES(0.795)PVK;KQALYLMFDTS(0.024)QES(0.975)PVK 131.71 1.0831e-12 13364700.0 4436.5599999999995 4696.9 5959.799999999999 4802.9 6551.0 5345.1 5111.700000000001 4729.0 7788.8 7237.5 7161.2 True False 5185.342864522009 4935.952147918055 6804.989256840963 5979.610715610371 5587.3565780572235 5910.714934209776 6040.429723083467 5399.350231955107 6024.6492361577775 5602.543723337947 5382.876400934584 0.9633033490461942 0.9169729676611312 1.2641919951309804 1.1108578890223415 1.0379871581459936 1.0980588246803415 1.122156496484801 1.0030604141342838 1.1192248878521096 1.040808539160443 1.0 12.394161583917644 KQALYLMFDTSQES(ph)PVK ddPTM_A549_PD325901_60min_R1 3 KQALYLMFDTSQESPVK 17 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KQALYLMFDT(0.047)S(0.07)QES(0.883)PVK;KQALYLMFDT(0.003)S(0.154)QES(0.843)PVK;KQALYLMFDT(0.001)S(0.056)QES(0.943)PVK 134.29 1.2127e-12 28870000.0 14103.400000000001 13350.5 15211.2 15076.0 16295.0 15455.699999999999 17092.7 16260.4 16804.0 16340.6 16891.7 True False 15535.16678562566 14475.593488583832 16243.523504376328 16007.210279919782 15150.495414698222 15329.833903521001 17743.172051984322 15936.07356596297 16097.786317484106 15308.851727295758 14814.12798530866 1.0486723755209935 0.9771478620232958 1.0964886708475325 1.0805367886516382 1.0227058541497105 1.0348117633872054 1.1977196409792348 1.0757348378363516 1.0866509546460288 1.0333954008280286 1.0 13.854686085950107 -3.819697289857469 15.315831901049643 1.0536205157657967 1.0488762338823954 0.0 0.056707404361119644 0.0 0.0 0.007859791614941901 0.0 0.00015146165923870183 3.819697289857469 -0.004744281883401369 KQAREES(ph)EES(ph)EAEPVQR ddPTM_A549_MK2206_60min_R1 4 KQAREESEESEAEPVQR 17 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 KQAREES(1)EES(1)EAEPVQR;KQAREES(1)EES(1)EAEPVQR;KQAREES(1)EES(1)EAEPVQR;KQAREES(1)EES(1)EAEPVQR 102.45 1.2736e-08 60280000.0 4373.71 4159.84 4342.72 4039.5299999999997 4063.58 4155.700000000001 3002.5 3495.41 4812.259999999999 6818.5 6606.0199999999995 True False 5111.8853210569805 4371.558087886787 4958.582996991239 5029.215031341392 3465.832764991877 4595.453415669598 3548.0153850104884 3990.895071744176 3722.2907936001225 5278.196114346089 4965.562917123086 1.0294674352890225 0.8803751278252961 0.9985943345702504 1.0128187106438247 0.6979737892435945 0.9254647443541166 0.71452430353377 0.8037145311324329 0.7496211115892412 1.062960273072954 1.0 12.277741561672055 -6.693581348684649 24.99999999999127 0.8531098099054922 0.9744815020195304 0.2319498048400762 0.11329898069841483 68.85282426493376 25365.409568165083 0.016580925469797034 0.034515945414947145 2.024970269523768e-07 6.693581348684649 0.1213716921140382 KQAREES(ph)EES(ph)EAEPVQR ddPTM_A549_PD325901_60min_R1 2 KQAREESEESEAEPVQR 17 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 KQAREES(1)EES(1)EAEPVQR;KQAREES(1)EES(1)EAEPVQR 166.27 3.5779e-23 167754000.0 5954.5 6043.9 5915.1 7201.9 6945.4 8296.7 7738.5 7935.6 7214.5 8154.8 7554.8 True False 6558.996456528779 6553.240664068898 6316.534256385851 7646.745006298377 6457.579064329248 8229.13442596212 8032.992852169684 7777.3182326422275 6911.299654099559 7639.904536293127 6625.607493822995 0.9899464256890682 0.9890777064863012 0.9533517133749184 1.1541198317931423 0.9746395436719729 1.2420196085617932 1.21241604783543 1.1738271909244493 1.0431193910208103 1.153087402689603 1.0 12.693837024228344 -6.228329447495482 24.67743674021384 1.0651806938184896 0.9786205116220051 0.17870185194704202 0.09254048180250633 929.3434224834737 692655.3442355724 0.014135321869908827 0.03739462592862601 5.911130569858889e-07 6.228329447495482 -0.08656018219648443 KQAREES(ph)EESEAEPVQR ddPTM_A549_MK2206_60min_R1 2 KQAREESEESEAEPVQR 17 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 KQAREES(0.98)EES(0.02)EAEPVQR;KQAREES(0.998)EES(0.002)EAEPVQR 59.81399999999999 0.0012817 5214700.0 1380.2 1743.08 1641.67 982.7 1430.1100000000001 1248.5 1546.15 1442.8899999999999 1586.6 2298.7 1823.38 True False 1613.1440173497656 1831.7953267033583 1874.4834916067837 1223.46154411508 1219.7427134552618 1380.6154413127733 1827.0654413102295 1647.4240761652998 1227.2376332795723 1779.4220734835158 1370.5844232720908 1.1769753033516868 1.3365067452978832 1.3676527033130144 0.8926568282413613 0.889943510771329 1.0073187888833106 1.3330557463569812 1.2019865746265308 0.8954119224189803 1.2982943941792207 1.0 10.420575480600139 -4.665936848000801 0.3034719396898639 0.9613013630257571 1.7110779211873306 0.0 0.19255173079766663 10.800495070307843 0.5332464421737538 0.06532109563213191 3.2043129805326624 2.1580581957347228e-05 4.665936848000801 0.7497765581615735 KQAREES(ph)EESEAEPVQR ddPTM_A549_PD325901_60min_R1 1 KQAREESEESEAEPVQR 17 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 KQAREES(1)EESEAEPVQR 70.76 0.00038707 5986500.0 1363.8 1425.0 1459.9 1182.7 1513.3 1248.4 1235.6 1450.1 1316.9 1466.0 1540.9 True False 1502.2519720235032 1545.0897510379352 1558.9775930918663 1255.7526928934158 1407.0110286015852 1238.2334443057005 1282.6214341462635 1421.176617918556 1261.5552726431097 1373.436509810874 1351.3790685698964 1.1116436586614211 1.1433429649558167 1.1536197572910925 0.9292379333818765 1.041166806061723 0.9162739553277728 0.9491203941049672 1.0516491271561008 0.9335317543271976 1.0163221717384745 1.0 10.400216699249771 -6.255934350134413 24.981896831401208 0.971859401481291 1.1369162215567248 0.7085551516247679 0.044507577549421785 166.61103848885193 756080.0459385351 0.005909011161764433 0.015151325401475547 5.547095589591707e-07 6.255934350134413 0.16505682007543376 KQAS(ph)FLEAEGGAK ddPTM_A549_MK2206_60min_R1 2 KQASFLEAEGGAK 13 1 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 KQAS(1)FLEAEGGAK;KQAS(1)FLEAEGGAK 105.39 4.3289e-05 18152900.0 4053.5 5374.9 4751.5 4646.6 7369.4 5426.4 4273.7 5030.200000000001 6713.8 6557.1 8060.4 True False 4737.631701439844 5648.459451945912 5425.334147770035 5785.017208593804 6285.371022185146 6000.618046247201 5050.175970331164 5743.246254341425 5193.135019735529 5075.846555896268 6058.780224277087 0.7819448017699177 0.9322766700321875 0.8954499003002486 0.954815489991478 1.0373987485137894 0.9904003486053456 0.833530146892518 0.9479212055470604 0.8571254984504998 0.8377670699388837 1.0 12.564811658968292 -9.20581069410221 0.008263288837362211 1.863509966038705 3.79143566370578e-06 0.0 0.07778581976800718 4163.621893945814 20.2013612769913 2302.664033287706 2251.4512256779426 6.2257160059689e-10 9.20581069410221 -1.8635061746030412 KQAS(ph)FLEAEGGAK ddPTM_A549_PD325901_60min_R1 2 KQASFLEAEGGAK 13 1 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 KQAS(1)FLEAEGGAK;KQAS(1)FLEAEGGAK 107.75 3.3496e-05 31017000.0 6633.5 7162.299999999999 7438.6 8012.200000000001 9653.400000000001 9446.2 7768.1 8355.8 8726.4 7924.1 10979.2 True False 7306.928036675404 7765.892157094033 7943.428127935586 8507.095396973556 8975.378486422089 9369.273279077624 8063.719296367425 8189.137014001703 8359.659754873433 7423.770973664634 9628.828002883118 0.7588595449505924 0.806525171575266 0.8249631342004573 0.883502685313967 0.932136131597182 0.9730439962446338 0.8374559493588359 0.8504811812558772 0.8681907862899138 0.7709942447244635 1.0 13.233144492146566 -14.999999707780983 0.020126975283226097 2.1009950970746862 3.9932149208738954e-10 0.0 0.07917224628232503 1426.755633211658 2.230360906561751 155.99975595388995 86.43776390117543 1.0000006728593788e-15 14.999999707780983 -2.1009950966753648 KQAT(ph)SPASK ddPTM_A549_PD325901_60min_R1 1 KQATSPASK 9 1 E9PKP7;P17480-2;P17480 E9PKP7 UBTF Nucleolar transcription factor 1 1 KQAT(0.587)S(0.301)PAS(0.112)K 44.299 0.036312 24409000.0 2020.4 1620.3 1585.4 1658.5 1755.8 1487.0 1087.7 1866.8 1449.6 1958.7 2003.2 True False 2225.5095206601313 1756.8483674433455 1692.9947777846742 1760.941778273212 1632.4786651811683 1474.8903650132793 1129.0930187122779 1829.56520952373 1388.6783531197902 1835.027347726166 1756.8190993310511 1.2667835416335949 1.0000166597188667 0.9636705215860418 1.0023466724284422 0.9292241106684073 0.8395231845867781 0.6426916801748147 1.0414078548100818 0.7904503962010437 1.0445169616068577 1.0 10.778749928521531 -2.0000000089299186 0.722524446836665 0.8906587076524267 55.400877871854 0.4423297457780261 0.11428915682948916 200.7869654951047 0.905520737930987 0.018126085167793782 17768.935870498353 0.009999999794381029 2.0000000089299186 54.51021916420157 KQAVGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KQAVGSPR 8 1 K4DI94;A0A0D9SFM0;Q149N8-2;Q149N8-4;Q149N8 K4DI94 SHPRH E3 ubiquitin-protein ligase SHPRH 1 KQAVGS(1)PR;KQAVGS(1)PR 84.65799999999999 0.0013062000000000002 19545500.0 6672.4 6118.700000000001 6077.1 5746.0 7150.200000000001 6485.4 5350.9 6523.0 6123.3 7068.6 8510.1 True False 7349.777136038733 6634.344322579516 6489.528550570985 6100.917369887179 6647.994618850892 6432.5850526275135 5554.531427624832 6392.89364780549 5865.958995349345 6622.28738966518 7463.411649968639 0.9847744544640811 0.8889157711952541 0.8695123430044562 0.8174435038582945 0.8907447331916667 0.8618826555888208 0.7442349006232521 0.8565645240581569 0.7859621404339923 0.8873002991457676 1.0 12.865619545888196 -10.945058741136279 1.2095190064517882 0.9998741517418696 0.8476845124773994 0.12861502952273363 0.06720900362878192 0.3428417411810051 0.8926202129734453 0.04303823301088749 0.010094605395336843 1.1348573085035964e-11 10.945058741136279 -0.15218963926447016 KQDAET(ph)PPPPDPPAPETLLAPPPLPS(ph)TPDPPRR ddPTM_A549_PD325901_60min_R1 1 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPRR 33 2 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 2 KQDAET(1)PPPPDPPAPET(0.07)LLAPPPLPS(0.478)T(0.452)PDPPRR 47.018 0.004695899999999999 16516000.0 1018.5 1188.0 1107.1 1268.1 1454.3 1619.8 1248.0 1514.6 1367.2 1131.4 1875.8 True False 1121.897370219929 1288.116929286363 1182.2344635331226 1346.4276569359427 1352.1549850626345 1606.608885842978 1295.4933229318042 1484.390114819286 1309.7413385660711 1059.9632109140675 1645.0884916759103 0.6819677943750078 0.7830076836621187 0.7186449054352926 0.8184530277543239 0.8219344989065883 0.9766094006324658 0.7874915723299717 0.9023162719393197 0.7961525141008013 0.6443198747529048 1.0 10.683949475351024 -14.999999999999998 0.08014449373974178 1.5860291803238766 0.6203550807543252 0.0 0.11829263417524107 93.23818180321743 0.5524099946682679 10.006170208797531 1.0255107557606304 1.000000000000004e-15 14.999999999999998 -0.9656740995695514 KQDAET(ph)PPPPDPPAPETLLAPPPLPSTPDPPRR ddPTM_A549_MK2206_60min_R1 2 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPRR 33 2 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KQDAET(0.999)PPPPDPPAPETLLAPPPLPSTPDPPRR;KQDAET(0.989)PPPPDPPAPET(0.01)LLAPPPLPSTPDPPRR 54.388999999999996 0.0016817999999999998 26334000.0 925.1400000000001 1130.66 1423.83 1272.13 1984.66 1735.2199999999998 1630.8600000000001 937.38 2439.3 1866.91 1569.38 True False 1081.2810144985965 1188.205764560674 1625.7505039712523 1583.8019071080853 1692.7191430632054 1918.8398286541856 1927.1661518062301 1070.256485605853 1886.8024447616665 1445.1737343746934 1179.659633315465 0.9166042339345182 1.0072445737769204 1.3781521873407137 1.3425922718545242 1.4349216462597545 1.6266046361705493 1.6336628781556914 0.9072587171588371 1.5994464771662633 1.2250768726509644 1.0 10.204154944112256 -5.6897944846506014 4.892334573495682 1.328435318963538 0.9420557469051949 0.3006653156090632 0.22715356473188067 0.23034642036788827 10.093279910184838 0.03705972260097965 0.15126627705540333 2.0427043575600382e-06 5.6897944846506014 -0.38637957205834317 KQDAET(ph)PPPPDPPAPETLLAPPPLPSTPDPPRR ddPTM_A549_PD325901_60min_R1 3 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPRR 33 2 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KQDAET(1)PPPPDPPAPETLLAPPPLPSTPDPPRR;KQDAET(1)PPPPDPPAPETLLAPPPLPSTPDPPRR;KQDAET(1)PPPPDPPAPETLLAPPPLPSTPDPPRR 134.61 3.6478e-30 81234100.0 4567.9 5224.73 5447.4 4604.51 6170.400000000001 5817.91 5331.0 6224.7 5785.099999999999 5954.400000000001 6215.799999999999 True False 5031.629845289751 5665.0363332915285 5817.093321877276 4888.92012509906 5737.012390724392 5770.530869881912 5533.874122235133 6100.543475317314 5541.972365227161 5578.438167815737 5451.296005202645 0.9230153417623314 1.039209084937764 1.0671028167110206 0.8968362973562872 1.0524125612054571 1.0585612787077776 1.0151483458160548 1.1190996543748561 1.016633908695836 1.023323290918664 1.0 12.412383545377846 -5.253884907820375 23.688816435697923 1.019588772619572 0.9230152425165111 0.23335298343837452 0.052773530727203526 507.3158736134302 1590724.2397210805 0.006874811366666837 0.09701135167445529 5.573334280366685e-06 5.253884907820375 -0.09657353010306091 KQDAETPPPPDPPAPETLLAPPPLPS(ph)TPDPPRR ddPTM_A549_MK2206_60min_R1 2 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPRR 33 2 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KQDAETPPPPDPPAPET(0.017)LLAPPPLPS(0.492)T(0.492)PDPPRR;KQDAETPPPPDPPAPET(0.048)LLAPPPLPS(0.476)T(0.476)PDPPRR 49.585 0.0016213 73873000.0 2967.62 3386.9 3929.5 2795.14 5518.0 4623.299999999999 4149.4 3834.2 7089.799999999999 5205.3 5448.200000000001 True False 3468.4817046569387 3559.2787433804547 4486.7621874486695 3479.9494254786046 4706.309509650401 5112.5345373018345 4903.292269296425 4377.709591745033 5483.971620084152 4029.419114762147 4095.2615773294683 0.8469499784477126 0.869121221238686 1.0955984380305446 0.849750219801073 1.1492085232610219 1.2484024379794887 1.197308688763631 1.0689694685143287 1.3391016706826004 0.9839222815627182 1.0 11.99973988897371 -6.794840337104827 10.659533462021695 1.1656509309991794 0.924973426154905 0.45120259188972234 0.11754841872860866 0.3698404243419333 116.08982379924414 0.019632657003376897 0.037265703551204815 1.6038349120191756e-07 6.794840337104827 -0.24067750484427441 KQDAETPPPPDPPAPETLLAPPPLPS(ph)TPDPPRR ddPTM_A549_PD325901_60min_R1 3 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPRR 33 2 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KQDAETPPPPDPPAPET(0.008)LLAPPPLPS(0.496)T(0.496)PDPPRR;KQDAETPPPPDPPAPET(0.013)LLAPPPLPS(0.493)T(0.493)PDPPRR;KQDAETPPPPDPPAPET(0.066)LLAPPPLPS(0.467)T(0.467)PDPPRR 124.11 4.0183999999999993e-22 210994900.0 8844.5 9537.3 9648.1 8850.5 9978.0 8332.599999999999 10232.5 12325.099999999999 9100.5 10428.5 10715.1 True False 9742.387129023231 10341.041742157258 10302.878084738439 9397.175284056122 9277.17970223129 8264.742068264728 10621.903386938851 12079.266211646094 8718.037632841228 9770.042730261059 9397.210628615287 1.0367318041544002 1.1004373692197478 1.0963762005467155 0.999996238824417 0.9872269622202047 0.8794888605665496 1.1303251365457612 1.2854097549823695 0.9277261069677505 1.0396747626907996 1.0 13.198016870233454 KQDDS(ph)PPRPIIGPALPPGFIK ddPTM_A549_MK2206_60min_R1 2 KQDDSPPRPIIGPALPPGFIK 21 2 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK 75.623 5.489399999999999e-05 60181000.0 6800.1 7721.2 7131.9 6840.6 9968.5 8019.7 6871.4 7486.6 11049.1 11242.900000000001 11041.2 True False 7947.790633516981 8114.176100088334 8143.310661576583 8516.547307086204 8502.146855192103 8868.339330953982 8119.844435157727 8547.848476750925 8546.49649178704 8703.121081466836 8299.36531838224 0.9576383649377913 0.977686339715191 0.9811967962827214 1.0261685057076506 1.024433378822441 1.0685563281943407 0.9783693238774664 1.0299400193673027 1.029777117155866 1.0486489927356635 1.0 13.018785297382715 -6.112973015151644 3.3173704339804386 1.0182038570852219 0.96906600499257 0.4955582971949192 0.023343928050346394 0.16930273051676809 3.4645653054885717 0.0030959472757410237 0.009338891229315792 7.709513705699238e-07 6.112973015151644 -0.04913785209265187 KQDDS(ph)PPRPIIGPALPPGFIK ddPTM_A549_PD325901_60min_R1 4 KQDDSPPRPIIGPALPPGFIK 21 2 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK 99.219 5.7023e-08 121139600.0 15117.100000000002 15954.7 16781.8 18270.4 18934.4 19443.7 18472.9 19370.4 19717.4 20231.300000000003 20625.600000000002 True False 16651.776863379175 17299.25856202451 17920.713865161382 19398.921112911 17604.513064133913 19285.356953738195 19175.896318258758 18984.04217621516 18888.746247105508 18953.892265304734 18088.781956450934 0.9205582168809722 0.9563528712808185 0.9907087115266148 1.0724282685044384 0.9732282199275271 1.0661501144835532 1.0600988150791508 1.049492565166609 1.0442243315542474 1.0478257911968074 1.0 14.142807644084007 -5.776886359032035 2.22973499639832 1.0288257253629636 0.926784006499773 0.6263721135093752 0.02969721274860256 0.1744144755557821 1.6438277316825647 0.004330186171169408 0.023159308497797928 1.6715279424624446e-06 5.776886359032035 -0.10204171886319058 KQDLSSS(ph)LTDDSK ddPTM_A549_MK2206_60min_R1 1 KQDLSSSLTDDSK 13 1 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 KQDLS(0.029)S(0.152)S(0.818)LT(0.001)DDSK 90.714 2.7626e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KQDLSSS(ph)LTDDSK ddPTM_A549_PD325901_60min_R1 1 KQDLSSSLTDDSK 13 1 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 KQDLS(0.08)S(0.233)S(0.681)LT(0.006)DDSK 61.477 0.0031598000000000004 9579800.0 5039.3 5551.9 4533.0 7747.7 7380.7 5889.2 4726.9 5614.8 7162.2 6137.6 6421.7 True False 5550.88602626341 6019.778097394743 4840.636639143391 8226.257832696634 6862.305094032725 5841.240307758035 4906.784766158929 5502.808409274611 6861.197641221415 5750.070888550634 5631.871610510287 0.9856201295328287 1.0688770117132178 0.8595076333256105 1.4606614641826463 1.2184768348103292 1.0371756871831064 0.8712529520385037 0.9770834262281803 1.2182801945301702 1.0209875661618 1.0 12.45939872996695 -11.313407680886296 1.9023166995521557 0.9995408890668195 1.1016183238172503 0.0065530736549727076 0.1657900158130182 1.0664071109172326 6.967891452879181 0.1316489645040486 0.02567265785080592 4.859508197954434e-12 11.313407680886296 0.10207743475043085 KQDSDPHLDRNT(ph)LPK ddPTM_A549_MK2206_60min_R1 1 KQDSDPHLDRNTLPK 15 2 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1 A0A0A0MTL4 NAV2 Neuron navigator 2 1 KQDS(0.004)DPHLDRNT(0.996)LPK 41.513000000000005 0.056496000000000005 2107800.0 608.28 626.17 533.46 564.34 592.79 566.37 650.4 666.13 826.61 842.28 815.67 True False 710.9427929818248 658.0393784116862 609.1126495779022 702.6033253341857 505.59137626416475 626.3028974740208 768.5692610860353 760.5559674375679 639.3841548249256 652.0083630111349 613.1166276532299 1.1595555574850989 1.0732695032760782 0.9934694674801866 1.1459537935277921 0.8246251258905999 1.021506951901244 1.2535449642392136 1.2404751936816296 1.042842627302798 1.0634328504623456 1.0 9.26001772067743 -8.98757769138406 20.07614367006302 1.018900173713846 1.0854025902786164 0.03936428078196308 0.1146184605660438 18.25049725655154 29500.038683186685 0.021197904873945794 0.02136439475455528 1.0290164289267181e-09 8.98757769138406 0.06650241656477052 KQEAES(ph)WSPDACLGVK ddPTM_A549_MK2206_60min_R1 1 KQEAESWSPDACLGVK 16 1 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4;Q3HKR1;A0A0A0MSJ3 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 KQEAES(0.611)WS(0.389)PDACLGVK 53.778999999999996 0.006329100000000001 1501100.0 1307.5 1140.3 1143.3 1082.5 1694.0 1358.7 1350.3 1518.4 2244.0 1534.2 1748.6 True False 1528.1740346941153 1198.3363993849046 1305.4371316732572 1347.7125485952722 1444.8148440282305 1502.476732167934 1595.6320314336926 1733.6378499049765 1735.7375829316534 1187.6231544518237 1314.3743610950971 1.162662693314321 0.9117162011487251 0.9932003927599488 1.0253643014402676 1.099241499829968 1.143111716601133 1.2139859682779115 1.3189833134454645 1.3205808286502858 0.903565368897132 1.0 10.360160528338945 -7.001443595767472 2.0276860268633876 1.1741425720659666 1.0110826640175803 0.16200562666013507 0.1283954968906354 0.3855601497379169 3.162306485419356 0.020740915625450208 0.042515417942828676 9.966815162844111e-08 7.001443595767472 -0.16305990804838633 KQEAES(ph)WSPDACLGVK ddPTM_A549_PD325901_60min_R1 1 KQEAESWSPDACLGVK 16 1 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4;Q3HKR1;A0A0A0MSJ3 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 KQEAES(0.552)WS(0.448)PDACLGVK 67.727 0.00090499 2765100.0 2480.7 2555.3 2638.0 2504.9 2883.2 2934.6 2443.5 2594.5 3072.2 2700.3 3206.3 True False 2732.5388378051803 2770.6440988261297 2817.0305435826717 2659.621983959343 2680.693978500026 2910.70159056353 2536.4887296345055 2542.7506621541247 2943.086117863286 2529.8025971639177 2811.9454264103183 0.9717609780547886 0.9853121873574505 1.0018083982443589 0.9458298724362412 0.9533236147908298 1.0351202278769975 0.9020405253285957 0.9042674293292231 1.0466369973688925 0.8996627649326113 1.0 11.45735287985091 -8.785899697561824 24.999989997741384 1.0220230274179223 0.9640607931451678 0.0 0.05301591751304425 204.49934047709377 209010.20407647433 0.006980936030766394 0.007433520194576152 1.637194595879483e-09 8.785899697561824 -0.05796223427275449 KQEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A549_MK2206_60min_R1 2 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 KQEGPATQVDSAVGT(0.001)LPAT(0.58)S(0.417)PQS(0.001)TSVQAK;KQEGPATQVDSAVGTLPAT(0.499)S(0.499)PQS(0.002)TSVQAK 154.49 9.098e-46 168875000.0 1869.3600000000001 1213.11 1174.22 1328.05 2811.8 1557.68 1463.5 1999.05 2445.1 2239.7 2161.45 True False 2184.86226653598 1274.852117388249 1340.742052613813 1653.4223096184298 2398.1879447689357 1722.5126636956995 1729.3990061491597 2282.421459333868 1891.2887540223628 1733.750214460794 1624.7023120147537 1.3447769787602415 0.7846681253301943 0.8252232071678359 1.01767708299009 1.4760783726558506 1.0602020142137014 1.0644405398823948 1.404824405341981 1.1640832539205423 1.0671186971543192 1.0 10.665959687527494 -6.533707714077342 24.938587330175928 1.1295066003950256 0.9576310329652158 0.1395678853686948 0.19636199017213482 317.77436518632953 731817.7295409548 0.027937243555271534 0.058197940478202245 2.926121033408303e-07 6.533707714077342 -0.1718755674298098 KQEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A549_PD325901_60min_R1 2 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 KQEGPATQVDSAVGT(0.001)LPAT(0.823)S(0.176)PQSTSVQAK;KQEGPATQVDSAVGTLPAT(0.499)S(0.499)PQS(0.001)TSVQAK 184.06 1.4589999999999997e-66 270990000.0 2375.5 2326.5699999999997 2163.53 2931.6 3025.3 2804.1 2729.1000000000004 3137.2 3253.3999999999996 2924.4 2799.0 True False 2616.6590112493286 2522.6382189981255 2310.3601561627825 3112.678273853334 2812.813364718412 2781.2643392963923 2832.957393920823 3074.626084914212 3116.670912003259 2739.7528849187725 2454.7407443228894 1.065961453282148 1.0276597334493525 0.941182958528709 1.2680272982196044 1.1458698321701146 1.1330175480765772 1.154076005978489 1.252525787916683 1.2696537991684964 1.1161068195307526 1.0 11.26135494804919 -6.249260086534362 24.957129309788034 1.1499965544646278 1.0132072207667717 0.4161030842059832 0.08028935764482907 861.0111657824959 1764332.555711031 0.015285289368434709 0.040124758081436805 5.633002104202136e-07 6.249260086534362 -0.13678933369785606 KQEGT(ph)PEGLYL ddPTM_A549_PD325901_60min_R1 1 KQEGTPEGLYL 11 1 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 1 KQEGT(0.577)PEGLY(0.423)L 72.705 0.0056714 7637300.0 3045.6 2564.7 2954.0 3156.8 3090.0 3176.6 2886.0 3252.2 3147.2 3670.6 3554.4 True False 3354.787069947781 2780.836269815432 3154.4762038450403 3351.7883663870252 2872.9690599212945 3150.730822798372 2995.8283092797965 3187.3323196984566 3014.934128682813 3438.8376895714837 3117.2313331980263 1.0762072850416404 0.8920853066629866 1.011948061169013 1.0752453084540128 0.9216412748468884 1.0107465523150565 0.9610542141594348 1.0224882207983301 0.9671833131453017 1.1031705131885465 1.0 11.606049507598916 -6.775444688566279 24.998510691616076 0.9836803851841622 1.0050351190821207 0.0 0.06340074486154018 685.9465434634077 1224367.7099957806 0.006981896923070319 0.013249669513142647 1.677085914606887e-07 6.775444688566279 0.0213547338979585 KQEGTPEGLY(ph)L ddPTM_A549_MK2206_60min_R1 2 KQEGTPEGLYL 11 1 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 1 KQEGT(0.223)PEGLY(0.777)L;KQEGT(0.126)PEGLY(0.874)L 77.67699999999999 0.00027068 7526100.0 3388.9 3195.3 3008.4 3296.0 4849.4 3436.0 3466.8999999999996 3237.8 4861.200000000001 4588.0 5475.9 True False 3960.8634693498198 3357.9271217702217 3435.0363569717724 4103.520147963063 4136.059683961334 3799.595239367791 4096.79085371952 3696.768065346639 3760.1459617412424 3551.5676134956116 4116.08290284836 0.9622895269210618 0.8158064842295841 0.8345401290617109 0.9969478858463702 1.0048533476085113 0.9231095021770437 0.995313007637555 0.8981276987371775 0.9135253226166055 0.8628513315506595 1.0 12.007056324795746 -14.999742447590542 0.010448641775393753 2.0273562327582515 0.010049169545311947 0.0 0.06891388838589504 11488.038962644529 9.34728161366346 1051.357653169539 773.3974729127041 1.0005932122194986e-15 14.999742447590542 -2.0173070632129395 KQEKT(ph)PKT(ph)PK ddPTM_A549_MK2206_60min_R1 3 KQEKTPKTPK 10 3 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 2 KQEKT(1)PKT(1)PK;KQEKT(1)PKT(1)PK;KQEKT(1)PKT(1)PK 78.763 0.0008795999999999999 92996000.0 9700.2 8459.9 8004.6 6041.92 15493.0 12076.7 10343.900000000001 12165.4 15703.5 13396.4 12399.4 True False 11337.356612879435 8890.472774845519 9139.772644268136 7522.190671232094 13214.000223452995 13354.648378135336 12223.252736389673 13889.882704974985 12146.682323336545 10370.143935796128 9320.286773969206 1.2164171433591227 0.9538840370959268 0.9806321270923517 0.807077169797066 1.4177675584359282 1.4328580978252483 1.3114674508222441 1.4902849066584822 1.3032519940546494 1.1126421522521266 1.0 13.186158630208833 -6.759320950457794 24.998581704877815 1.2240438491997652 0.9863248558039829 0.39158273638656005 0.1691412987385365 65.86800352471533 777256.7955764169 0.029632339353437825 0.059390730184049424 1.740520126218419e-07 6.759320950457794 -0.23771899339578229 KQEKT(ph)PKT(ph)PK ddPTM_A549_PD325901_60min_R1 3 KQEKTPKTPK 10 3 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 2 KQEKT(1)PKT(1)PK;KQEKT(1)PKT(1)PK;KQEKT(1)PKT(1)PK 67.964 0.0010970999999999997 217416000.0 22215.9 22356.6 18356.1 15430.400000000001 25612.4 16562.6 15771.6 16046.1 20987.0 30442.7 21706.7 True False 24471.24181351881 24240.669142494517 19601.855330196322 16383.500763018978 23813.47338198323 16427.71967691252 16371.796868550666 15726.047947578065 20104.98937425843 28520.542726616302 19036.91351010849 1.285462677577682 1.2733508049833215 1.0296761247451092 0.8606174921328205 1.250910415143632 0.8629402906195637 0.8600026921305987 0.8260818088619053 1.056105516452696 1.4981705259874223 1.0 14.216511970347815 -5.780300667293471 4.7990491012796985 0.9947911441496601 1.2845840662013572 0.19130057490162145 0.19187260639703496 0.11391094155089974 6.582329481794691 0.016126848924065112 0.05800894933209778 1.6584383530850734e-06 5.780300667293471 0.28979292205169715 KQELANSSDATLPDRPLS(ph)PPLTAPPTMK ddPTM_A549_MK2206_60min_R1 4 KQELANSSDATLPDRPLSPPLTAPPTMK 28 2 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 KQELANS(0.001)S(0.005)DAT(0.134)LPDRPLS(0.795)PPLT(0.006)APPT(0.058)MK;KQELANSSDATLPDRPLS(1)PPLTAPPTMK;KQELANSSDAT(0.002)LPDRPLS(0.998)PPLTAPPTMK;KQELANSSDAT(0.051)LPDRPLS(0.949)PPLTAPPTMK 153.57 1.6864e-37 45202100.0 5268.099999999999 5906.3 6218.0 5789.71 7288.5 6041.7 5452.0 5508.36 9107.3 8213.9 8009.4 True False 6157.226487320897 6206.905442152992 7099.805899365266 7208.189209909957 6216.3713050175675 6681.02868384412 6442.557828168923 6289.186898645008 7044.511091369623 6358.374285198696 6020.444931805481 1.0227195094490127 1.0309712176524457 1.1792825912014602 1.197285132836234 1.0325435039156365 1.1097234107314615 1.0701132393277872 1.0446382235671299 1.1700980859660537 1.0561302955547296 1.0 12.555654395764899 KQELANSSDATLPDRPLS(ph)PPLTAPPTMK ddPTM_A549_PD325901_60min_R1 3 KQELANSSDATLPDRPLSPPLTAPPTMK 28 2 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 KQELANSSDATLPDRPLS(1)PPLTAPPTMK;KQELANSSDATLPDRPLS(0.99)PPLT(0.01)APPTMK;KQELANSSDATLPDRPLS(1)PPLTAPPTMK 177.21 4.7312999999999994e-58 50750000.0 5397.0 6328.8 6386.9 6501.400000000001 7669.700000000001 7446.299999999999 6191.8 7399.499999999999 6515.299999999999 7734.3 7456.5 True False 5944.899466938592 6862.150186925535 6820.353441549726 6902.976712249301 7131.0067310285995 7385.659801612897 6427.43233728297 7251.911167704541 6241.484598566061 7245.9549780561065 6539.397770647952 0.9090897473192774 1.049355067178549 1.0429635389611627 1.0555982300439455 1.0904684163786582 1.1294097806320007 0.982878326523042 1.108957035807594 0.9544433321644583 1.108046219573847 1.0 12.674942065140039 -8.781406364881397 24.997411422727215 0.9784871261675342 1.048561138309665 0.0 0.06981459411638079 249.84823712596503 312792.98028087185 0.009782374264206197 0.010420596161365902 1.6542214011388796e-09 8.781406364881397 0.07007401214213071 KQELDLNS(ph)SMR ddPTM_A549_MK2206_60min_R1 5 KQELDLNSSMR 11 1 G3V2B0;G3V2H1;Q8N3R9-2;Q8N3R9 G3V2B0 MPP5 MAGUK p55 subfamily member 5 1 KQELDLNS(0.5)S(0.5)MR;KQELDLNS(0.5)S(0.5)MR;KQELDLNS(0.5)S(0.5)MR;KQELDLNS(0.5)S(0.5)MR;KQELDLNS(0.961)S(0.039)MR 71.279 0.0010855 32916800.0 9692.11 10803.690000000002 10296.1 8263.06 12944.7 10663.61 9846.630000000001 9873.240000000002 14236.399999999998 13193.15 14568.300000000001 True False 11327.901218660947 11353.551674709028 11756.2418012954 10287.510070942857 11040.551777740407 11792.026132268566 11635.635214156813 11272.80200552938 11011.878130859252 10212.808251959385 10950.589045374421 1.0344558791972842 1.036798260592641 1.0735716364282057 0.9394480998525233 1.0082153327088816 1.0768394360712104 1.0625579287053748 1.029424258258606 1.005596875677726 0.9326263828952034 1.0 13.418720855767122 -8.76407607061135 4.478691316773578 1.00246690856151 1.0328733584808294 0.19774108438752502 0.04124309599530088 0.3170331594474479 15.264819340196576 0.006338914280814499 0.006924242222575403 1.7215670005248738e-09 8.76407607061135 0.03040644991931929 KQELDLNSS(ph)MR ddPTM_A549_MK2206_60min_R1 2 KQELDLNSSMR 11 1 G3V2B0;G3V2H1;Q8N3R9-2;Q8N3R9 G3V2B0 MPP5 MAGUK p55 subfamily member 5 1 KQELDLNS(0.457)S(0.543)MR;KQELDLNS(0.129)S(0.871)MR 49.928999999999995 0.022069 12833300.0 2709.8599999999997 3307.1 3011.2 3533.2 4483.3 3023.0 3010.3 3074.8 4735.0 4847.0 4770.0 True False 3167.2181182838954 3475.4172642338144 3438.2334390750566 4398.834158611373 3823.812508991599 3342.8918534950058 3557.2325440456525 3510.6623161800753 3662.5300602412526 3752.0593336122997 3585.477354697252 0.883346289758209 0.9693039225811173 0.9589332462442429 1.2268475640624423 1.0664723635702535 0.9323422023891909 0.9921224406522616 0.9791338694639465 1.0214902223390299 1.046460195515337 1.0 11.80794949045362 -5.466593498051737 2.1163496837107205 1.0175600695418319 0.8784214987661703 0.24711130821319294 0.0736629028294465 0.5263407199268647 3.50758938031071 0.010233863894418662 0.11742132127180435 3.415124195117335e-06 5.466593498051737 -0.1391385707756616 KQELDLNSS(ph)MR ddPTM_A549_PD325901_60min_R1 2 KQELDLNSSMR 11 1 G3V2B0;G3V2H1;Q8N3R9-2;Q8N3R9 G3V2B0 MPP5 MAGUK p55 subfamily member 5 1 KQELDLNS(0.059)S(0.941)MR;KQELDLNS(0.117)S(0.883)MR 110.55 3.4105e-05 47907000.0 6576.8 6992.2 7385.2 7106.3 8718.1 6282.1 7855.3 7148.9 6807.299999999999 7948.4 8806.6 True False 7244.471894415737 7581.457233128034 7886.4040828152965 7545.240011421727 8105.770731812249 6230.940660423615 8154.2377400850955 7006.309581296445 6521.212854023414 7446.536667517574 7723.444029636998 0.937984643459147 0.9816161292858314 1.0210994023589703 0.9769268712854716 1.049502100450027 0.8067567572851913 1.0557774108021012 0.907148359515689 0.8443400158012037 0.9641471652986863 1.0 12.915028600613748 -7.198032918184953 24.999881436199253 0.926459275875706 0.9933904882150445 0.17370690054390048 0.06901439078861712 327.2256768347437 129018.11311385606 0.011204859268962643 0.01940739883815161 6.338216677046883e-08 7.198032918184953 0.06693121233933852 KQELLEALTK ddPTM_A549_PD325901_60min_R1 1 KQELLEALTK 10 1 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 100.56 1.7775e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KQEQANNPFYIKS(ph)SPSPQK ddPTM_A549_MK2206_60min_R1 1 KQEQANNPFYIKSSPSPQK 19 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 KQEQANNPFY(0.003)IKS(0.525)S(0.406)PS(0.066)PQK 83.039 3.1712e-05 10230000.0 1348.2 1431.2 1759.0 1245.8 2785.2 1799.4 1747.6 1728.5 2418.6 2357.7 2144.2 True False 1575.7431996746507 1504.0419668505442 2008.452649884771 1551.0210559260875 2375.50076953213 1989.81131365495 2065.1162986991926 1973.5201683092428 1870.79096171056 1825.093932506236 1611.735963090533 0.9776683251846875 0.9331813654927178 1.246142479834927 0.9623294953051593 1.4738771262366475 1.234576481025745 1.2812993852537078 1.2244686558491764 1.1607304202130504 1.1323777431922442 1.0 10.654399703503143 -3.7239451825619723 11.789434246752368 1.1213182448876695 0.6847427190982884 0.0 0.16142609087805493 0.0 0.0 0.021876106554997634 0.0 0.00018882296698326083 3.7239451825619723 -0.4365755257893811 KQEQANNPFYIKSS(ph)PS(ph)PQKR ddPTM_A549_PD325901_60min_R1 2 KQEQANNPFYIKSSPSPQKR 20 3 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 2 KQEQANNPFY(0.137)IKS(0.471)S(0.496)PS(0.896)PQKR;KQEQANNPFY(0.087)IKS(0.455)S(0.487)PS(0.97)PQKR 49.902 0.0049221 7570800.0 4409.5 3868.0 4776.6 4603.2 5984.0 4813.2 4152.700000000001 5070.2 5200.0 5283.4 5268.2 True False 4857.14919389767 4193.9699347471815 5100.768800029189 4887.529209374289 5563.704483679301 4774.002895011371 4310.7332709446355 4969.070883505045 4981.462083487103 4949.805222329317 4620.2447978713235 1.0512752908970309 0.9077376022758493 1.1040040134625024 1.0578507034142675 1.204201233285876 1.0332792100563348 0.9330097125872446 1.075499481281692 1.0781814170933546 1.0713296456953605 1.0 12.173753577714397 -11.017699934124067 1.311515452837002 1.0000694255883833 1.0517990321150024 0.0 0.0781550743034461 1.1771414581580828 3.6143326381092478 0.05365969813021818 0.012207691147998863 9.60063736572547e-12 11.017699934124067 0.051729606526619065 KQETAAVCGET(ph)DEEAGES(ph)GGEGIFR ddPTM_A549_PD325901_60min_R1 2 KQETAAVCGETDEEAGESGGEGIFR 25 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 2 KQETAAVCGET(1)DEEAGES(1)GGEGIFR;KQET(0.002)AAVCGET(0.998)DEEAGES(1)GGEGIFR 169.26 4.391e-48 49545000.0 5147.9 5480.6 6392.4 6217.0 6726.0 6222.1 5324.5 6917.2 5951.200000000001 6108.4 7240.0 True False 5670.511018316319 5942.469396167376 6826.226704623913 6601.009970168562 6253.588963440338 6171.429280530684 5527.126761178199 6779.23101956158 5701.091759855472 5722.7145815339345 6349.525898141375 0.8930605385791376 0.9358918274365724 1.0750765984940824 1.0396067479779554 0.9848906932202419 0.9719511943934549 0.8704786546025572 1.0676751506039195 0.8978767629760024 0.9012821859989704 1.0 12.632433158446842 -7.393025667294931 4.577692398200208 0.9543610689463317 0.9906672535138149 0.0601959147756056 0.06752553939902901 0.595903974551067 19.68938858901739 0.010483040894855189 0.016931775281915185 4.0455198151136166e-08 7.393025667294931 0.036306184567483246 KQETAAVCGETDEEAGES(ph)GGEGIFR ddPTM_A549_MK2206_60min_R1 2 KQETAAVCGETDEEAGESGGEGIFR 25 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 KQETAAVCGETDEEAGES(1)GGEGIFR;KQETAAVCGETDEEAGES(1)GGEGIFR 105.56 2.7437e-12 4472100.0 2184.6 2373.2 2130.56 1666.27 2700.6 1650.6799999999998 1972.1 1710.04 3013.7 2373.7 3100.4 True False 2553.307071657945 2493.985743243228 2432.7054449906177 2074.506224801702 2303.3453174631877 1825.3538619672956 2330.4050427241255 1952.4434067778625 2331.1017618899814 1837.479521393752 2330.485113313073 1.0956118350947555 1.0701573371982278 1.043862254726968 0.8901606849796757 0.9883544435899432 0.7832505994309182 0.9999656420937898 0.8377841143993504 1.0002646009508431 0.7884536618135902 1.0 11.186414581912254 -6.049513942947736 6.910386688343895 0.9662077801174127 1.0769767086957427 0.2565037800526595 0.09129485071765481 0.2262092698720702 26.446656159917943 0.010699770750063595 0.02905483861701527 8.922489736320785e-07 6.049513942947736 0.11076892857832998 KQFS(ph)LENVQEGEILHDAK ddPTM_A549_MK2206_60min_R1 1 KQFSLENVQEGEILHDAK 18 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 KQFS(1)LENVQEGEILHDAK 89.87299999999999 2.5765e-06 2670500.0 1614.5 2108.4 2034.9 1750.8 2269.5 1585.1 1768.2 1934.6 3455.0 2014.7 2463.6 True False 1886.9881292647406 2215.708554295477 2323.4794185619785 2179.7460785964 1935.6595563884712 1752.8342298957773 2089.4590520484735 2208.8354744640205 2672.4480165012737 1559.577870730082 1851.8201280989815 1.0189910459618243 1.1965031164069113 1.2547003800780516 1.1770830468475664 1.045274066858511 0.9465466992710464 1.1283272172840266 1.1927915897164048 1.4431466512056559 0.8421864775447138 1.0 10.85472825750314 -8.271881830239519 5.067662769763846 1.214200472180873 1.1120305695727715 0.0 0.16769538165219705 0.43023229957889414 34.47364571917989 0.029160758745265813 0.036341962801377595 5.3470983197326364e-09 8.271881830239519 -0.10216990260810155 KQFS(ph)LENVQEGEILHDAK ddPTM_A549_PD325901_60min_R1 2 KQFSLENVQEGEILHDAK 18 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 KQFS(1)LENVQEGEILHDAK;KQFS(1)LENVQEGEILHDAK 132.26 2.9618e-13 19917000.0 5069.0 5522.0 5251.4 4808.6 5636.4 5242.4 5273.9 6191.0 5778.6 5592.1 5472.1 True False 5583.601148399428 5987.358319460682 5607.791583233529 5105.616300877043 5240.518708524398 5199.707632512179 5474.601150488813 6067.515648254454 5535.745537622806 5239.013851646244 4799.066390499919 1.1634765377392047 1.2476089789699654 1.1685171920802215 1.063876988862659 1.0919871245995605 1.0834831630596644 1.1407637871662206 1.2643116711753597 1.1535046792812023 1.091673551759407 1.0 12.228538056162218 -10.528365389906703 0.8818679201483303 1.0016479000195413 1.1516045249713949 0.2526471387349214 0.06456380076736526 0.4383867728539574 0.6220369305255353 0.040639969699380565 0.01207476246034166 2.962338003315264e-11 10.528365389906703 0.14995662495185358 KQGGLGPMNIPLVSDPK ddPTM_A549_MK2206_60min_R1 3 KQGGLGPMNIPLVSDPK 17 1 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ;; 73.707 0.00055509 5563100.0 5519.87 6251.57 6578.87 6926.19 9165.7 7266.799999999999 6808.6 6906.4 10150.8 8871.5 9529.900000000001 False True 6451.489108135381 6569.748210385588 7511.852691726793 8623.106860928483 7817.437671729369 8035.767952688551 8045.634488054089 7885.403349962947 7851.660007496711 6867.421988475658 7163.362818140325 0.9006229716297195 0.9171318523401494 1.0486489212446368 1.203779157896559 1.091308351984166 1.1217870931148384 1.1231644539460603 1.1007963089617832 1.0960857640231987 0.9586868853110115 1.0 12.806421299820693 -5.78047136317664 4.49804421296369 1.0745912984991832 0.9049898561719639 0.541969023944437 0.061677576391362864 0.11319753179039399 5.41212637262768 0.008867419229156225 0.032498834965259384 1.6577866455787198e-06 5.78047136317664 -0.1696014423272193 KQGGLGPMNIPLVSDPK ddPTM_A549_PD325901_60min_R1 2 KQGGLGPMNIPLVSDPK 17 1 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 73.166 0.00061291 7882400.0 5063.2 4774.1 4865.0 5167.4 6534.9 5550.1 5964.5 5998.9 5966.5 4816.299999999999 6223.8 False True 5577.212336669165 5176.430161705406 5195.168155621572 5486.578561983115 6075.911168181127 5504.901825729789 6191.482311399638 5879.24723345399 5715.748754062661 4512.197996045097 5458.312055918829 1.021783342456832 0.9483573142529 0.951790242550916 1.005178616717898 1.1131483700336613 1.0085355636199729 1.1343217917864885 1.0771181957394156 1.0471641590855318 0.8266654507508793 1.0 12.414239161622463 -6.524276109512125 24.995298913783895 1.0404931330969556 0.9725932312113975 0.07810770282742785 0.07821390675686044 44.55181166180832 796923.6302606568 0.00688749640189144 0.014424949964415259 2.99036286215203e-07 6.524276109512125 -0.06789990188555806 KQGGS(ph)PDEPDSK ddPTM_A549_MK2206_60min_R1 4 KQGGSPDEPDSK 12 1 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 KQGGS(1)PDEPDSK;KQGGS(0.997)PDEPDS(0.003)K;KQGGS(0.996)PDEPDS(0.004)K;KQGGS(0.996)PDEPDS(0.004)K 124.51 4.7748000000000004e-06 115966400.0 10386.800000000001 11207.4 8792.7 9056.1 5413.870000000001 3976.15 3070.72 4264.15 5173.36 13543.1 13993.599999999999 True False 12139.8379071211 11777.808789324188 10039.637074839022 11274.844906543778 4617.496894710223 4396.903553845239 3628.630075956504 4868.606320911687 4001.6022201583282 10483.704303908551 10518.602916287517 1.1541302589075955 1.119712273869266 0.9544648804351346 1.0718956686809862 0.43898385854648686 0.4180121246935617 0.34497262657740946 0.462856746248392 0.3804309614123804 0.9966822007963694 1.0 13.360655477754591 -6.747122005470396 24.79284661907226 0.6166937538599856 1.069627782124972 0.5348985080645776 0.2212783627732444 179.9136442520483 311547.43637960247 0.03966055669370832 0.08225099279343012 1.790102893405569e-07 6.747122005470396 0.4529340282649864 KQGGS(ph)PDEPDSK ddPTM_A549_PD325901_60min_R1 4 KQGGSPDEPDSK 12 1 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 KQGGS(1)PDEPDSK;KQGGS(0.998)PDEPDS(0.002)K;KQGGS(0.999)PDEPDS(0.001)K;KQGGS(1)PDEPDSK 138.21 1.3505e-08 279002000.0 8595.300000000001 7758.8 8804.1 8205.3 10040.399999999998 8236.9 8522.3 10257.8 8625.5 8993.3 10522.800000000001 True False 9467.888528474577 8412.661305510965 9401.599169354135 8712.12274541163 9335.196941499606 8169.821417335492 8846.620790081499 10053.200131911579 8263.000230984237 8425.461503193821 9228.562309525154 1.025933207245337 0.911589587126473 1.0187501426576904 0.9440390012233556 1.0115548476997756 0.8852756413534864 0.9586131071521901 1.0893571278741094 0.8953724268032168 0.9129766068217992 1.0 13.171890196837278 KQHEEFDLS(ph)PDQWR ddPTM_A549_MK2206_60min_R1 2 KQHEEFDLSPDQWR 14 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 KQHEEFDLS(1)PDQWR;KQHEEFDLS(1)PDQWR 111.77 3.5320999999999996e-06 16187900.0 3494.1 3490.1 2882.3 2425.63 4713.8 4403.299999999999 3701.1000000000004 3507.8 5345.0 4513.1 4947.1 True False 4083.8186574567567 3667.731182577617 3291.053480820282 3019.909458890668 4020.406264333101 4869.25428332602 4373.541962185618 4005.0413921869595 4134.36603421109 3493.587575515924 3718.5985369859036 1.0982144527940574 0.9863208265419485 0.8850252179918925 0.8121095700044147 1.0811616861420663 1.3094326356812847 1.1761264139394236 1.0770297875266823 1.1118075783362689 0.9394903861678058 1.0 11.860543286453542 -6.895675724622109 13.318613674749967 1.086876671604475 0.9440644557269979 0.30658431302366884 0.1103430298665062 0.6281619917513428 76.477103288382 0.016506925859660543 0.031200284847668527 1.2715231611460844e-07 6.895675724622109 -0.14281221587747717 KQHEEFDLS(ph)PDQWR ddPTM_A549_PD325901_60min_R1 2 KQHEEFDLSPDQWR 14 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 KQHEEFDLS(1)PDQWR;KQHEEFDLS(1)PDQWR 100.97 1.2737999999999999e-05 23659000.0 5604.0 5596.5 5023.9 5378.3 6463.1 6479.7 5047.3 5899.1 6839.4 6521.2 7859.9 True False 6172.913954553242 6068.136695918459 5364.852065164891 5710.505375994467 6009.154152484575 6426.9314715376895 5239.37776348854 5781.437822745579 6551.963802654172 6109.450319085047 6893.182128011245 0.8955100619594671 0.8803099328044564 0.7782838122561991 0.8284280423680038 0.8717532833008547 0.932360606782912 0.7600811448456759 0.8387182748664127 0.9504991571352085 0.8863033364893388 1.0 12.750954418606742 -8.870813162682305 3.4109873583482377 0.97938444763242 0.8467862308607907 0.34812601199854565 0.05510891744181669 0.1183653800666227 2.5747557612191128 0.00887239854661786 0.009346446983133295 1.3464394796177002e-09 8.870813162682305 -0.1325982167716293 KQHS(ph)YIEQGK ddPTM_A549_PD325901_60min_R1 1 KQHSYIEQGK 10 1 A0A2R8Y595;A0A2R8YFL0;P49711;P49711-2 A0A2R8Y595 CTCF Transcriptional repressor CTCF 1 KQHS(0.978)Y(0.022)IEQGK 51.875 0.005354600000000001 5495800.0 2322.3 2228.2 2555.7 2554.6 2373.4 3257.4 2377.1 2810.8 2687.1 3234.7 2865.5 True False 2558.058186413099 2415.9782338685795 2729.1451706725675 2712.391840082453 2206.7005717855036 3230.872814387528 2467.5618412990325 2754.7363889700573 2574.1705316419607 3030.460489962646 2513.061665901121 1.0179050602388793 0.9613684640731927 1.08598416334283 1.0793176613554596 0.8780924884285464 1.2856321268300503 0.9818946644965142 1.0961674464053701 1.0243165006931605 1.2058838551723317 1.0 11.29523035739208 -3.3558106400748846 17.610383254648987 1.0289000028097426 1.0394824864596877 0.0 0.11202684033507589 0.0 0.0 0.011473625466317536 0.0 0.0004407469949498843 3.3558106400748846 0.010582483649945074 KQHS(ph)YIEQGKK ddPTM_A549_MK2206_60min_R1 1 KQHSYIEQGKK 11 2 A0A2R8Y595;A0A2R8YFL0;P49711;P49711-2 A0A2R8Y595 CTCF Transcriptional repressor CTCF 1 KQHS(0.987)Y(0.013)IEQGKK 65.043 0.0015065999999999999 3277700.0 1176.2 1016.7 962.64 812.21 1656.1 1331.5 1095.5 1040.8 1830.1 1748.3 1368.5 True False 1374.7138046709133 1068.445687323189 1099.1568271091962 1011.2014864614919 1412.4898838224044 1472.3984462218318 1294.5381696183142 1188.3365873163193 1415.5852720691692 1353.3578157529173 1028.6636813214232 1.3364074474807486 1.0386734816482117 1.0685288564841888 0.9830243886539288 1.3731308973676581 1.4313701095487168 1.2584659039923993 1.1552236254611226 1.3761400327176962 1.3156465425263109 1.0 10.006555658925702 -5.06960063564441 13.076043512898353 1.1869630173872605 1.3547831612600014 0.05418327238999776 0.15533640348808056 20061.661899511357 1170562.4293959364 0.024545060818009046 14550.707845694325 8.51921079534352e-06 5.06960063564441 0.1678201438727409 KQHS(ph)YIEQGKK ddPTM_A549_PD325901_60min_R1 2 KQHSYIEQGKK 11 2 A0A2R8Y595;A0A2R8YFL0;P49711;P49711-2 A0A2R8Y595 CTCF Transcriptional repressor CTCF 1 KQHS(0.971)Y(0.029)IEQGKK;KQHS(0.992)Y(0.008)IEQGKK 76.58800000000001 0.00031152 11591300.0 3147.2 3378.5 3282.8 3197.8 4098.4 3973.7999999999997 3326.4 3222.2 4134.299999999999 4304.1 4019.2 True False 3466.701427153815 3663.2180518467817 3505.590549080059 3395.3208432692663 3810.5425227124388 3941.438690309191 3452.9879722759256 3157.930693233002 3960.549748415527 4032.3383914576966 3524.8638798079855 0.9834993762490088 1.0392509262077754 0.9945321773024108 0.9632487832279708 1.0810467163117843 1.118181814874479 0.979608884205771 0.8959014591522405 1.1236036010080694 1.1439699599626398 1.0 11.78335183048054 -6.762096827716674 24.9999980918821 1.0469764144811913 0.9982412095565729 0.11858917664343616 0.07020530316474183 35.43531819443375 1347526.0002271011 0.01049286225508667 0.020726207696661707 1.7294307326300473e-07 6.762096827716674 -0.04873520492461836 KQHYLS(ph)S(ph)EDEPDDNPDVLDSR ddPTM_A549_PD325901_60min_R1 2 KQHYLSSEDEPDDNPDVLDSR 21 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 KQHY(0.04)LS(0.981)S(0.979)EDEPDDNPDVLDSR;KQHY(0.022)LS(0.989)S(0.989)EDEPDDNPDVLDSR 78.128 5.1618999999999995e-05 37213000.0 5078.6 6380.8 5913.9 5595.0 5864.5 6008.6 6383.6 6404.0 5910.799999999999 5929.6 7080.9 True False 5594.175733332285 6918.53240941955 6315.25281716966 5940.59044283306 5452.597751426679 5959.667953744981 6626.5313912399515 6276.267196159187 5662.389631360692 5555.204044048136 6209.994189523382 0.9008342943009482 1.1140964384622956 1.0169498753837574 0.9566177135648818 0.878035886188996 0.9596897793880844 1.0670752965307586 1.0106719917303 0.9118188292210433 0.8945586540837808 1.0 12.600376203228661 -6.243893584470604 9.56667080760098 0.9632926233325944 1.0210382612388833 0.09081193283342526 0.06887955455564383 0.5950899019627798 306.61817193534216 0.009336242264757042 0.024150303020200013 5.703039972129158e-07 6.243893584470604 0.05774563790628895 KQHYLS(ph)SEDEPDDNPDVLDSR ddPTM_A549_PD325901_60min_R1 1 KQHYLSSEDEPDDNPDVLDSR 21 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 KQHYLS(0.5)S(0.5)EDEPDDNPDVLDSR 74.763 3.7517e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KQIS(ph)VR ddPTM_A549_MK2206_60min_R1 3 KQISVR 6 1 P11216;P11217-2;P11217 P11216 PYGB;PYGM Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form 1 KQIS(1)VR;KQIS(1)VR;KQIS(1)VR 81.594 0.033899 1738430000.0 11359.580000000002 11675.0 12069.44 11572.720000000001 17034.9 11515.44 12153.0 13100.2 19630.9 23557.6 20829.699999999997 True False 13276.799388933521 12269.207632043108 13781.068078809121 14408.03691951915 14529.088775995577 12733.996217469581 14361.042789019963 14957.193467679921 15184.532494105608 18235.92179853625 15657.11061952564 0.8479725098433114 0.7836188892184518 0.8801795180282531 0.920223230814452 0.927954660924262 0.8133043526938676 0.9172217746938967 0.9552971701577642 0.969817028383852 1.1647054326738058 1.0 13.934530380206036 -7.036725107490868 0.24808329137742413 1.0157266337317519 0.767201451961964 0.586611794875381 0.0632660029509303 1.71729035696438 0.18165543020815858 0.0351136147218289 0.13221448371638525 9.189140514008245e-08 7.036725107490868 -0.24852518176978788 KQIS(ph)VR ddPTM_A549_PD325901_60min_R1 6 KQISVR 6 1 P11216;P11217-2;P11217 P11216 PYGB;PYGM Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form 1 KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR 98.458 0.014280000000000001 1568823000.0 52176.1 54098.0 55081.3 59781.899999999994 66731.3 63645.3 65224.7 69015.2 68377.1 73421.5 75873.0 True False 57472.979261985296 58657.02831694752 58819.44824876431 63474.49218845424 62044.32369848731 63126.99377833196 67706.86165082523 67638.63769462297 65503.448274770395 68785.65395980846 66541.10199857462 0.8637214824487942 0.8815157332110913 0.8839566295434104 0.9539140513454967 0.9324210425582726 0.9486917391251531 1.0175193920334469 1.0164941015865931 0.9844058229780075 1.0337318122756958 1.0 16.021958138687477 -6.530700014735596 0.721385422523267 0.9961566857062497 0.8559800574783542 0.8555915231322336 0.021768700068067956 0.233006892688904 0.1929018950044842 0.0033853675583753744 0.018836363397058246 2.94645617089189e-07 6.530700014735596 -0.14017662822789556 KQISGQYSGS(ph)PQLLK ddPTM_A549_PD325901_60min_R1 1 KQISGQYSGSPQLLK 15 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 KQISGQYS(0.009)GS(0.991)PQLLK 169.39 1.5497000000000002e-27 18618000.0 6084.8 5576.5 5745.0 6346.0 7395.1 7404.1 6545.8 7043.2 7825.1 7405.1 6945.5 True False 6702.52441660699 6046.4512257284505 6134.890247491451 6737.978007188306 6875.693687710022 7343.803464421535 6794.9040009992 6902.717850716486 7496.23825951826 6937.540722237724 6091.247531152064 1.10035331552834 0.9926457913268973 1.0071648239734452 1.1061737308701889 1.128782511718021 1.2056320855233034 1.1155192702723822 1.1332190680832412 1.2306573031518986 1.1389359382880961 1.0 12.572522017340027 -6.360501120547937 4.9694892176342265 1.1220037557458227 1.0296686017288013 0.33413005921328576 0.0611548499391586 0.2992495182887539 11.705548731147227 0.012389384755614732 0.02953727961212587 4.360124390184115e-07 6.360501120547937 -0.09233515401702141 KQIT(ph)MEELVR ddPTM_A549_MK2206_60min_R1 7 KQITMEELVR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR 116.51 4.9612e-05 115587900.0 7541.8099999999995 11532.8 9286.5 6974.11 13173.400000000001 9822.769999999999 6880.31 9438.14 12707.300000000001 12047.1 11554.45 True False 8814.68314844851 12119.770259428416 10603.465340053966 8682.767263079691 11235.610310697459 10862.209001572988 8130.373266824812 10776.025248091511 9829.116839388318 9325.651742925678 8685.161178402865 1.0149130185825133 1.3954571493234107 1.2208714521523554 0.9997243671966473 1.293655935670684 1.2506629155695723 0.936122324021156 1.2407398120472348 1.13171380904595 1.073745386109299 1.0 13.08433690724483 -11.62807354371278 0.19961096833213404 0.8149524169751652 1.2180628008405596 0.11568025193492892 0.13260389863412092 14.137879851300752 0.5594284426987426 1.4454645169751836 0.14804973023230153 2.354650512068735e-12 11.62807354371278 0.40311038386539444 KQIT(ph)MEELVR ddPTM_A549_PD325901_60min_R1 2 KQITMEELVR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 KQIT(1)MEELVR;KQIT(1)MEELVR 113.35 6.7944e-05 227808000.0 5179.7 5873.5 5393.200000000001 6155.400000000001 6888.1 7025.599999999999 7193.200000000001 7129.5 8189.5 7151.2 7922.0 True False 5705.539330906394 6368.480458050042 5759.214983946203 6535.605078072317 6404.30361865498 6968.385842930252 7466.941162270075 6987.296529515449 7845.323794753393 6699.672011568572 6947.644221695575 0.8212192721512092 0.9166388281891343 0.8289450064184007 0.9406936897637083 0.9217949875234123 1.0029854178729973 1.0747443196577164 1.0057073025840977 1.1292063243904478 0.9643084472643758 1.0 12.762308162380894 -7.120147770303263 1.1243305857316308 1.0598774349452817 0.8633053498993003 0.6555213872849432 0.05228862288495015 0.19510801435738837 0.4845772572354394 0.008808228501591775 0.02074574268122284 7.58319510110715e-08 7.120147770303263 -0.19657208504598145 KQITT(ph)SPITVR ddPTM_A549_MK2206_60min_R1 1 KQITTSPITVR 11 1 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 KQIT(0.044)T(0.456)S(0.456)PIT(0.044)VR 50.102 0.016753 13997000.0 3091.5 3342.2 4130.6 3692.5 4047.2 3747.9 3514.9 3354.6 5210.3 4846.3 5079.0 True False 3613.269620081725 3512.303704309592 4716.381191366706 4597.162665762622 3451.8622412934205 4144.50029034533 4153.511832397458 3830.124823031635 4030.175369139389 3751.517464098471 3817.744126731098 0.9464410133676371 0.9199945275842685 1.2353843093735715 1.204156830096126 0.9041628057585516 1.0855888065746337 1.0879492429352142 1.0032429350657237 1.0556431325297286 0.9826529331368961 1.0 11.898504698177543 -10.879943296119007 0.5268583160195054 0.987059423240092 1.0542192057956035 0.044325832374639385 0.1010668014462447 5.624409971288747 1.9284193791203847 0.1948290182754755 0.023714283685114773 1.3184288686581052e-11 10.879943296119007 0.06715978255551147 KQITTS(ph)PITVR ddPTM_A549_MK2206_60min_R1 1 KQITTSPITVR 11 1 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 KQIT(0.02)T(0.089)S(0.729)PIT(0.161)VR 103.83 8.5688e-05 15465000.0 3312.6 4334.8 3722.3 3697.3 5147.3 4118.7 3454.7 3173.4 6112.7 5270.9 6129.3 True False 3871.6858947057176 4555.422804572201 4250.178111805618 4603.138665978106 4390.13898858708 4554.538100228211 4082.3742716388783 3623.2391681299105 4728.183209976072 4080.2000292009675 4607.2256499257555 0.8403508290869385 0.9887561736086469 0.9225027022225639 0.9991129186503561 0.9528812613416985 0.988564148209586 0.8860808177920838 0.7864253768834392 1.02625388232336 0.8856088976815623 1.0 12.169682543784281 KQITTS(ph)PITVR ddPTM_A549_PD325901_60min_R1 2 KQITTSPITVR 11 1 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 KQIT(0.068)T(0.395)S(0.525)PIT(0.012)VR;KQIT(0.021)T(0.13)S(0.838)PIT(0.011)VR 94.551 0.00012016 71720000.0 5457.1 5159.200000000001 5486.8 5515.8 6130.2 4951.4 5922.1 6081.0 5916.4 6343.3 6630.8 True False 6011.100774695308 5593.983890213976 5859.167242808724 5856.498438709307 5699.635900041915 4911.0774400314385 6147.468756197464 5959.70968454779 5667.754282835216 5942.782955445653 5815.253636104396 1.0336781765416012 0.96195011262851 1.007551451656672 1.0070925199803566 0.9801181954739412 0.8445164643448536 1.0571282253331975 1.0248408852791095 0.9746357833210542 1.021930138790419 1.0 12.505626401824033 -11.143055012717074 1.4882573461495048 1.0000651200856843 0.9852533968251856 0.01679864711309742 0.05313195934111323 2.5936378780586247 10.217928178746257 0.03803692657559698 0.007976625199113536 7.193578501214074e-12 11.143055012717074 -0.014811723260498622 KQKEDVEVVGGS(ph)DGEGAIGLSSDPK ddPTM_A549_MK2206_60min_R1 1 KQKEDVEVVGGSDGEGAIGLSSDPK 25 2 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 1 KQKEDVEVVGGS(1)DGEGAIGLSSDPK 107.52 1.0215e-12 8120500.0 1331.2 1684.2 1860.6 1223.8 2439.1 2113.7 1810.7 2285.2 2827.0 2561.1 2903.0 True False 1555.874015284746 1769.9185862001711 2124.4610576325213 1523.6310549384696 2080.311621056233 2337.3703310394953 2139.680751919563 2609.13409813149 2186.6890137913465 1982.5457312388003 2182.1049812759147 0.7130151980016101 0.8111060656510068 0.9735833407933985 0.6982391168217654 0.9533508419195481 1.0711539321416124 0.9805581171756708 1.195695954374241 1.002100738761318 0.9085473651591095 1.0 11.091504796187406 -6.953727767749545 7.076284178022946 1.01967152329714 0.8128838092643333 0.5591233536286205 0.09400106526450772 0.1169586240894376 14.156890752147275 0.012191179581924024 0.023083535034304357 1.1124288213467147e-07 6.953727767749545 -0.2067877140328067 KQKEDVEVVGGS(ph)DGEGAIGLSSDPK ddPTM_A549_PD325901_60min_R1 2 KQKEDVEVVGGSDGEGAIGLSSDPK 25 2 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 1 KQKEDVEVVGGS(1)DGEGAIGLSSDPK;KQKEDVEVVGGS(1)DGEGAIGLSSDPK 147.54 6.683899999999999e-33 31699000.0 4341.3 4122.8 4812.799999999999 4214.0 5791.2 4605.799999999999 4925.1 5479.7 5176.4 5013.4 4995.200000000001 True False 4782.025580103857 4470.242824967857 5139.425549717468 4474.289209311616 5384.446090555407 4568.29189184812 5112.527375618133 5370.403084758509 4958.853909415893 4696.853068407805 4380.822067181742 1.0915817868814326 1.0204118670913382 1.1731646414536414 1.021335525774961 1.2290949068422936 1.042793298105116 1.1670246582069266 1.2258893427765676 1.1319459757483392 1.0721396569820905 1.0 12.096985903566821 -10.593212181173955 0.9956857336282348 1.0034917239075278 1.1222293639804548 0.14930547304798936 0.07331595438711004 0.501551167072245 0.9239429057042523 0.03919057492061651 0.01210367472490114 2.5514544462280713e-11 10.593212181173955 0.11873764007292698 KQKSYT(ph)LVVAK ddPTM_A549_PD325901_60min_R1 1 KQKSYTLVVAK 11 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 KQKS(0.424)Y(0.006)T(0.57)LVVAK 51.211000000000006 0.008647499999999999 6348400.0 2152.5 2263.0 2585.7 2354.1 2291.8 2558.3 2757.9 2872.0 2957.6 2877.9 2952.3 True False 2371.020215413252 2453.710951999191 2761.181151077223 2499.5074104509913 2130.831874280784 2537.466053001661 2862.853393680786 2814.7157069595855 2833.3023573310497 2696.1889028545143 2589.1858161716555 0.9157396895210167 0.9476766544423697 1.0664283474099507 0.9653642449450531 0.8229737166687446 0.9800247001018773 1.10569638370481 1.0871045598115459 1.0942831293276365 1.0413269244773913 1.0 11.338282790436892 -7.569353104295769 8.107134821784724 1.0533732959442392 0.9469263888289363 0.48341479906889107 0.05993018246606372 0.20660088423447948 31.968132808340517 0.01025495963828769 0.015246670275246042 2.695546919583649e-08 7.569353104295769 -0.10644690711530291 KQNS(ph)PVAPTAQPK ddPTM_A549_MK2206_60min_R1 1 KQNSPVAPTAQPK 13 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 KQNS(0.746)PVAPT(0.254)AQPK 80.638 0.00028 33526000.0 1272.9 1664.8 1636.5 1663.3 2080.3 1454.3 1509.2 1898.7 1817.4 2000.2 2649.0 True False 1487.7344005828982 1749.5312090642724 1868.5803078660756 2070.8085746683755 1774.290625756747 1608.1930607137895 1783.4021045987777 2167.846539524882 1405.7618017914378 1548.3534308007684 1991.1801913192899 0.747162113739779 0.8786403243119304 0.9384285339982297 1.0399905461576164 0.8910748678054903 0.8076582258726942 0.8956507865906173 1.0887244403976009 0.7059942680828031 0.7776058829587296 1.0 10.959408067930367 KQNS(ph)PVAPTAQPK ddPTM_A549_PD325901_60min_R1 2 KQNSPVAPTAQPK 13 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 KQNS(0.994)PVAPT(0.006)AQPK;KQNS(0.998)PVAPT(0.002)AQPK 100.77 6.2476e-05 120033000.0 11630.3 10350.2 11141.400000000001 10814.900000000001 12297.7 11193.099999999999 11450.0 11860.7 11030.6 11031.4 13128.099999999999 True False 12810.999494225656 11222.447678030063 11897.52240268082 11482.91181058002 11433.951976761857 11101.947104660476 11885.736015680415 11624.129033960844 10567.022241944784 10334.875521369495 11513.426925882563 1.1127008124250224 0.9747269644628248 1.0333606561513669 0.99734960620335 0.9930971942904294 0.9642608735113377 1.0323369481731708 1.0096150441385456 0.917799913958699 0.8976367842433042 1.0 13.491029689398474 -2.0000000000000004 0.46971240563621003 0.9693980318193548 3.965729507283276 0.4321374570264658 0.04174019459435766 61.54973630243527 0.6288050663871209 0.008093197101323758 180.5164833909684 0.00999999999999999 2.0000000000000004 2.996331475463921 KQNSPVAPT(ph)AQPK ddPTM_A549_MK2206_60min_R1 1 KQNSPVAPTAQPK 13 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 KQNS(0.28)PVAPT(0.72)AQPK 62.924 0.0041891 29516000.0 1140.2 1536.4 1401.7 1093.7 1704.4 1252.3 1176.7 1355.9 1661.2 1632.8 1769.9 True False 1332.63788478641 1614.5961975050132 1600.482137204937 1361.6565490980586 1453.685017805027 1384.8175547905375 1390.4911585484904 1548.102977269598 1284.9408523912932 1263.9493459711505 1330.3849832450023 1.001693420753978 1.2136308044959876 1.2030217999763713 1.0235056515571759 1.0926799656587207 1.0409149022509006 1.0451795352927695 1.1636503694543738 0.9658413681558069 0.950062847889484 1.0 10.377628074034126 -8.03168854351888 0.544114230966674 0.9819933667487609 1.127045968264876 0.2936110252191896 0.07413722059618544 0.6639805551062795 0.4186173201130879 0.020679516620649947 0.03465154323563703 9.296328386621025e-09 8.03168854351888 0.145052601516115 KQPAS(ph)PDGR ddPTM_A549_PD325901_60min_R1 1 KQPASPDGR 9 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KQPAS(1)PDGR 52.928000000000004 0.009588 4843200.0 1978.7 1924.1 1750.1 1492.3 1726.0 1431.4 1503.7 1665.5 1902.4 2165.8 1970.7 True False 2179.5761673580487 2086.250659629536 1868.8723102062295 1584.4759817407992 1604.7717143767502 1419.743152979157 1560.9241263562135 1632.2802959405253 1822.4487437742052 2029.0510183822596 1728.3163932965767 1.2610978960864583 1.2070999660254558 1.0813253391883633 0.9167742595547465 0.9285173250690643 0.821460213237433 0.9031472086999762 0.9444337288423951 1.054464767471239 1.1740043815195573 1.0 10.755151632520343 -5.85111147251367 2.6801467385339572 0.9844279595515669 1.2473939960092433 0.5742388235685857 0.08788070846074464 0.14598340327107123 2.062569787602927 0.01175794986407082 0.049819350030769045 1.4089271157118933e-06 5.85111147251367 0.26296603645767636 KQPAS(ph)PDGRT(ph)SPINEDIR ddPTM_A549_PD325901_60min_R1 1 KQPASPDGRTSPINEDIR 18 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 KQPAS(0.994)PDGRT(0.609)S(0.397)PINEDIR 69.704 0.03857 13846000.0 3878.0 4064.6 3247.8 3621.8 4171.3 3881.9 3808.6 3926.4 4035.1 4270.0 3768.4 True False 4271.691705167288 4407.138106714941 3468.2152386079633 3845.5103602954005 3878.322278203788 3850.287093439845 3953.5383571458897 3848.084871798785 3865.5187794382364 4000.3914712772394 3304.910689855795 1.2925286357295414 1.3335120129697786 1.0494126964620922 1.163574668477106 1.1735028998235992 1.165020012570399 1.1962617837997904 1.1643536642639776 1.1696288166888111 1.2104386008239727 1.0 11.690395570300325 -14.999999999999902 0.15519066796649594 0.2878171298252542 1.245796555211467 0.0 0.09141674728932259 34.20283509556707 0.3458017281397101 7.423070390033073 0.1188560171215534 1.000000000000225e-15 14.999999999999902 0.9579794253862127 KQPPKEPS(ph)EVPTPK ddPTM_A549_MK2206_60min_R1 1 KQPPKEPSEVPTPK 14 2 P17096-2 P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPKEPS(0.987)EVPT(0.013)PK 56.407 0.0028958 6162200.0 1254.8 1228.8 1842.0 1229.0 1954.4 1554.8 1384.2 1474.8 2177.0 1787.4 1883.3 True False 1466.5795630854116 1291.3406713708418 2103.2232979464193 1530.1050551719065 1666.910348978026 1719.3279040072896 1635.6912226249858 1683.8574163855776 1683.9129759546383 1383.6250985967872 1415.6246335642206 1.0359946615176496 0.9122055668949048 1.4857210365511808 1.0808691929296612 1.1775087190882834 1.2145365821152838 1.1554554673908772 1.189480160532392 1.189519407920254 0.9773954661364814 1.0 10.467223056378028 -10.73871197899571 0.9282995924758207 0.9972556187129741 1.1638599414631838 0.19354157373609915 0.1333455176928412 0.8342988466529864 1.2437364563871078 0.09486788495909643 0.022850767901790154 1.8251056981327187e-11 10.73871197899571 0.16660432275020975 KQPPKEPS(ph)EVPTPK ddPTM_A549_PD325901_60min_R1 1 KQPPKEPSEVPTPK 14 2 P17096-2 P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPKEPS(0.856)EVPT(0.144)PK 71.558 0.00037603 9904100.0 1982.5 2471.4 2500.4 2178.5 2299.7 2703.9 2786.5 2356.7 2501.9 2098.4 2297.2 True False 2183.761940560637 2679.673551379054 2670.0921801266554 2313.0609972675275 2138.177005534306 2681.8803348751894 2892.541782331308 2309.6937697046164 2396.7538435916126 1965.9066658848146 2014.6589631506029 1.0839362792924436 1.3300879207806344 1.3253320929072085 1.148115407905203 1.0613096532182005 1.3311832840835551 1.4357476055440357 1.1464440443521153 1.1896573501668366 0.9758012159092437 1.0 10.976319927974941 -10.119973574129565 0.6559490869803312 1.0010524960851181 1.2390220458233658 0.40451915876820055 0.11191174742290043 0.60755483286229 0.502375140093722 0.07184540270865829 0.025059360671179906 7.586237342217135e-11 10.119973574129565 0.2379695497382477 KQPPKEPSEVPT(ph)PK ddPTM_A549_MK2206_60min_R1 6 KQPPKEPSEVPTPK 14 2 P17096-2 P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPKEPSEVPT(1)PK;KQPPKEPS(0.001)EVPT(0.999)PK;KQPPKEPS(0.001)EVPT(0.999)PK;KQPPKEPS(0.003)EVPT(0.997)PK;KQPPKEPS(0.01)EVPT(0.99)PK;KQPPKEPSEVPT(1)PK 109.72 4.3613e-06 875287600.0 28691.600000000002 30896.699999999997 30573.600000000002 28395.219999999998 38646.3 29817.21 27553.300000000003 29341.579999999998 43985.0 44101.1 44125.899999999994 True False 33534.04063772825 32469.210059524325 34909.39621177774 35352.050174709875 32961.480464444045 32972.44737113789 32559.37795430789 33500.838819820136 34022.467729611744 34138.630880455865 33168.221217114355 1.0110292143259445 0.9789252744965006 1.0524952780333292 1.065841003148782 0.9937669026229349 0.9940975476286485 0.9816437770714002 1.0100282014078632 1.0257549690984518 1.0292572115034253 1.0 15.01751402326841 KQPPKEPSEVPT(ph)PK ddPTM_A549_PD325901_60min_R1 6 KQPPKEPSEVPTPK 14 2 P17096-2 P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPKEPSEVPT(1)PK;KQPPKEPS(0.001)EVPT(0.999)PK;KQPPKEPS(0.012)EVPT(0.988)PK;KQPPKEPSEVPT(1)PK;KQPPKEPS(0.009)EVPT(0.991)PK;KQPPKEPS(0.016)EVPT(0.984)PK 101.5 1.0142e-05 1133793700.0 41590.200000000004 41675.5 43369.5 45569.9 50739.200000000004 46922.59999999999 51150.700000000004 51910.399999999994 51936.1 50421.49999999999 49966.1 True False 45812.40648691297 45187.64064517999 46312.81507198968 48384.64922624814 47175.45363273742 46540.477902738436 53097.26787923704 50875.006349079 49753.40632965285 47237.87788501296 43820.58646120469 1.045453979203854 1.0311966199992686 1.0568734654656302 1.1041533930424257 1.0765591572924946 1.0620688051252285 1.211696879644575 1.1609841505457654 1.135388874215561 1.077983698982068 1.0 15.419321171933495 -6.040482195211537 4.88379221653105 1.0855746538753 1.0391560646242817 0.13860833308537157 0.05439533527786535 0.4401554416501114 25.059690212861174 0.009881742476171193 0.02845079358407078 9.109987997550289e-07 6.040482195211537 -0.04641858925101827 KQPPSEGPSNYDS(ph)YKK ddPTM_A549_MK2206_60min_R1 1 KQPPSEGPSNYDSYKK 16 2 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 KQPPSEGPS(0.134)NY(0.001)DS(0.864)Y(0.001)KK 56.93600000000001 0.0019665 3907600.0 1052.0 1038.3 888.38 840.49 1198.5 1040.3 1374.6 754.03 1511.1 1262.6 1302.9 True False 1229.551881069376 1091.1450350621296 1014.3656424699449 1046.41008773103 1022.2022376433496 1150.383855504748 1624.3470268893982 860.916061620027 1168.838262730847 977.3777830862164 979.3539717893178 1.2554723996502886 1.1141477611701163 1.0357497612601287 1.0684697442122975 1.0437515618339162 1.1746354113446356 1.6585903296247964 0.8790652679409671 1.1934788609631448 0.9979821507238176 1.0 9.935686582848431 -10.853841160082355 0.8937905833211316 0.9913975219196651 1.1574420118256752 0.09881762159471086 0.18523577915467695 1.4117532594024569 1.819755682544045 0.16434012385778726 0.03237517919332806 1.4000993046572092e-11 10.853841160082355 0.16604448990601006 KQPPSEGPSNYDS(ph)YKK ddPTM_A549_PD325901_60min_R1 2 KQPPSEGPSNYDSYKK 16 2 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 KQPPSEGPS(0.009)NY(0.004)DS(0.983)Y(0.004)KK;KQPPSEGPS(0.001)NYDS(0.999)YKK 78.021 8.0454e-05 9813200.0 2329.5 2239.3 3272.2 3097.0 3778.7 3038.9 3218.1 2997.3 2863.1 3048.7 3002.6000000000004 True False 2565.9891251127383 2428.013669824034 3494.271169337081 3288.294656202676 3513.2971478073127 3014.1522059440827 3340.566556511891 2937.5165001636374 2742.7738636984495 2856.2045617056046 2633.2992350496265 0.974438867774319 0.9220424467932814 1.326955601105937 1.2487356592197945 1.3341807497776081 1.144629583233551 1.2685860049812894 1.1155270396409307 1.041573182109993 1.0846486884927748 1.0 11.362655756062328 -8.678042758763763 2.8654957684725555 1.0180591811702273 1.1789867483041485 0.16734902156162768 0.12558074487256374 0.2856963078911834 4.680629047713381 0.023004794695172963 0.025685232435592193 2.0987332412174707e-09 8.678042758763763 0.1609275671339212 KQPPVS(ph)PGTALVGSQK ddPTM_A549_MK2206_60min_R1 4 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.99)PGT(0.01)ALVGSQK;KQPPVS(0.994)PGT(0.006)ALVGSQK;KQPPVS(0.989)PGT(0.01)ALVGSQK;KQPPVS(0.995)PGT(0.005)ALVGSQK 200.27 9.564399999999998e-40 912848500.0 15331.3 16930.7 17702.3 16601.5 20029.2 16417.600000000002 17808.2 15972.4 22939.199999999997 20525.9 20654.9 True False 17918.848625702394 17792.40031313338 20212.752327490147 20668.868245269667 17082.931212520798 18154.899534879125 21043.719426925494 18236.53661342351 17743.507826375113 15889.084934143342 15525.718283760221 1.1541397504581394 1.1459953084260257 1.3018883866154216 1.3312664746009941 1.1002989298336947 1.1693436144509337 1.3554103612028732 1.174601798133796 1.1428461796150637 1.0234041764601125 1.0 13.922372394561874 -9.712627996902338 0.6608149576780771 1.0096444703154581 1.221850799334859 0.49204722333760464 0.0788197298889073 0.4017077630838363 0.37354063400352 0.03769156656291668 0.019017825724157902 1.9380813531488586e-10 9.712627996902338 0.21220632901940095 KQPPVS(ph)PGTALVGSQK ddPTM_A549_PD325901_60min_R1 4 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.969)PGT(0.031)ALVGSQK;KQPPVS(0.879)PGT(0.121)ALVGSQK;KQPPVS(0.985)PGT(0.015)ALVGSQK;KQPPVS(0.854)PGT(0.146)ALVGSQK 186.06 1.6025e-34 1722543000.0 25418.8 24571.0 27275.0 25399.8 29889.899999999998 27151.1 28518.1 28374.6 25395.2 26796.1 25996.100000000002 True False 27999.29786366845 26641.684401932005 29126.04551789894 26968.687958868817 27790.536538557146 26929.990443518527 29603.371901203092 27808.646343556913 24327.92805818688 25104.18967294895 22798.74450285539 1.2281070065135264 1.1685592774021094 1.2775284847045458 1.1829023284809026 1.2189503038238167 1.181204975569849 1.2984650052767366 1.219744637257287 1.0670731476086313 1.1011215845593962 1.0 14.476666758791378 -8.846875264778943 3.1024662967995384 1.027661603491166 1.2226037565432555 0.731659048473579 0.04427360428297658 0.06921374582808283 1.2769462923028283 0.007300631323697799 0.007730056195742422 1.4227373577665348e-09 8.846875264778943 0.1949421530520894 KQPPVS(ph)PGTALVGSQKEPSEVPT(ph)PK ddPTM_A549_MK2206_60min_R1 2 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KQPPVS(0.999)PGT(0.001)ALVGS(0.001)QKEPS(0.009)EVPT(0.99)PK;KQPPVS(0.998)PGT(0.002)ALVGSQKEPS(0.002)EVPT(0.998)PK 157.5 1.2298e-40 50110000.0 4284.5 4589.200000000001 4209.1 4565.4 6183.0 4620.7 4814.9 4321.3 6736.799999999999 6711.9 7735.5 True False 5007.618854032077 4822.770677941947 4806.013671762364 5683.923204948592 5273.48889057057 5109.659407027576 5689.7050049248965 4933.857508426226 5210.925556458981 5195.677128383001 5814.561861060921 0.8612203247104832 0.8294297649904077 0.8265478614901969 0.9775325021499569 0.906945186340897 0.8787694634820294 0.9785268676953687 0.848534700691274 0.8961854187768843 0.8935629635617982 1.0 12.50545477048112 -14.999999999999996 0.14861593100334464 1.4007513433551395 0.8519770960024273 0.055274191085127766 0.0565688898100181 43.36018306113128 0.4254819640789334 5.111499868598232 0.0951923268409602 1.0000000000000082e-15 14.999999999999996 -0.5487742473527122 KQPPVS(ph)PGTALVGSQKEPSEVPT(ph)PK ddPTM_A549_PD325901_60min_R1 5 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KQPPVS(0.992)PGT(0.008)ALVGSQKEPS(0.002)EVPT(0.998)PK;KQPPVS(0.989)PGT(0.011)ALVGS(0.009)QKEPS(0.18)EVPT(0.811)PK;KQPPVS(0.918)PGT(0.082)ALVGS(0.001)QKEPS(0.028)EVPT(0.971)PK;KQPPVS(0.929)PGT(0.059)ALVGS(0.012)QKEPS(0.081)EVPT(0.919)PK;KQPPVS(0.94)PGT(0.06)ALVGS(0.001)QKEPS(0.067)EVPT(0.932)PK 148.36 1.4036e-32 228441900.0 14346.4 12623.14 14360.739999999998 14622.5 16699.5 15742.699999999999 15062.4 15279.1 16706.75 16542.7 17654.3 True False 15802.835966738528 13686.936308713683 15335.346174544891 15525.69861489301 15526.584730147473 15614.496670675551 15635.607874461533 14974.346364277928 16004.623396788107 15498.191098805151 15482.933019828353 1.0206616502506656 0.8840015190394086 0.9904677721530892 1.0027621119984107 1.0028193437421202 1.008497333850034 1.009860848357198 0.9671517886889326 1.0336945445860708 1.0009854772966633 1.0 13.918391174826462 -5.986444185741514 24.991378668737077 1.0096781971477669 0.9485573309054691 0.23965030148736755 0.03305271389838612 174.5389045027342 321774.0087329682 0.0041468906440529285 0.012885682951354673 1.0317056627184648e-06 5.986444185741514 -0.06112086624229773 KQPPVS(ph)PGTALVGSQKEPSEVPTPK ddPTM_A549_MK2206_60min_R1 2 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.926)PGT(0.065)ALVGS(0.007)QKEPS(0.001)EVPTPK;KQPPVS(0.995)PGT(0.005)ALVGSQKEPSEVPTPK 240.23 8.9551e-112 53178200.0 3699.9300000000003 4384.4 4387.0 4254.6 5698.4 4947.8 4251.1 4236.2 6890.3 7510.7 7526.1 True False 4324.387729396402 4607.547232713474 5009.142566824611 5296.977190996249 4860.172908624836 5471.372911916169 5023.469842870306 4836.694322818404 5329.658051548115 5814.027653592305 5657.161660206913 0.7644094316438954 0.8144627128341513 0.8854515510948646 0.9363312397903987 0.8591186182307318 0.9671586637522483 0.8879841419781117 0.854968376958402 0.9421081403838086 1.027728745050509 1.0 12.465862682980955 -2.0000000000000036 0.1265375829041853 1.0288785978016606 0.27933262962971134 0.6735651091998922 0.04342054406220759 34.93046581977588 0.2892734166380319 0.13082638901664545 4.6831406582978925 0.009999999999999919 2.0000000000000036 -0.7495459681719492 KQPPVS(ph)PGTALVGSQKEPSEVPTPK ddPTM_A549_PD325901_60min_R1 2 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.994)PGT(0.006)ALVGSQKEPSEVPTPK;KQPPVS(0.999)PGT(0.001)ALVGSQKEPSEVPTPK 329.88 2.0122999999999992e-232 282290000.0 16065.6 14588.3 16963.2 15707.7 21083.6 21365.5 18579.2 19802.1 21619.1 19415.4 21239.9 True False 17696.567885130367 15817.707238643292 18114.424760008187 16677.928954224994 19602.76067047141 21191.506451708938 19286.24162292834 19407.131581053076 20710.5244094454 18189.508330547116 18627.52695081948 0.9500224013554222 0.8491576622278044 0.9724546263083668 0.8953377975647638 1.052354438795163 1.1376446539392424 1.0353624329116797 1.0418522884058583 1.1118236180318226 0.9764854120770393 1.0 14.185148529802268 -6.768051849841426 24.700891510613694 1.0582562799748263 0.9158949758004066 0.6073052422856693 0.0516284253755176 64.75777496206804 241903.91840114517 0.007572686920725378 0.014551229841661975 1.705878714250947e-07 6.768051849841426 -0.14236130417441972 KQPPVSPGT(ph)ALVGSQK ddPTM_A549_MK2206_60min_R1 1 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.36)PGT(0.64)ALVGSQK 142.1 9.539500000000001e-14 4683100.0 1346.2 1296.7 1632.3 1244.3 1918.2 1544.3 1086.8 1741.3 2267.8 1841.4 2043.4 True False 1573.4056485699562 1362.6964913464928 1863.784684711149 1549.15355585875 1636.0353210241758 1707.7168009766247 1284.2574922329386 1988.134607507599 1754.1469209324432 1425.4264610921575 1535.9673850290058 1.0243743870513522 0.8871910332397841 1.2134272529985737 1.008584928923797 1.065149779201386 1.1118184003264988 0.8361228921593841 1.2943859530390056 1.1420469848709172 0.9280317244921442 1.0 10.584931866634907 -8.251234245435583 24.99294508316789 1.0860000929172375 1.0279299172151994 0.06333572879175464 0.1274690885333797 1881.033110760197 4606761.892992519 0.01933924618107184 0.0248227758427935 5.607454451540467e-09 8.251234245435583 -0.058070175702038096 KQPPVSPGTALVGS(ph)QK ddPTM_A549_MK2206_60min_R1 2 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGS(1)QK;KQPPVSPGT(0.002)ALVGS(0.998)QK 112.32 1.3122e-07 5983600.0 4712.200000000001 4859.5 5884.200000000001 5402.6 7343.5 6151.9 4637.4 5216.1 8244.5 6709.6 7306.3 True False 5507.5041577710235 5106.8277933973 6718.668040052284 6726.237242531934 6263.280877875629 6802.889974699275 5479.95555252211 5955.498148636293 6377.133913761149 5193.896699980422 5491.944066378308 1.002833257441199 0.9298761479857943 1.2233678928348857 1.224746130192762 1.1404487740906624 1.2387034340620073 0.9978170728413657 1.0844061914424554 1.1611796909589767 0.9457300797685592 1.0 12.423101216853299 -10.93771611667169 1.124538431694185 0.9981800746325842 1.1174241427940594 0.21272861877130467 0.09872987445816761 0.8006940509693582 1.7532427557384886 0.07645277442403835 0.016822506561017265 1.154207476921222e-11 10.93771611667169 0.11924406816147526 KQPPVSPGTALVGS(ph)QK ddPTM_A549_PD325901_60min_R1 2 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGS(1)QK;KQPPVSPGT(0.001)ALVGS(0.999)QK 93.006 3.3908e-06 9261000.0 6985.799999999999 5966.2 7194.2 7629.0 9589.2 8721.5 7420.3 8330.3 8582.599999999999 7819.3 8298.8 True False 7694.993273325846 6468.992612380721 7682.441674238993 8100.226003283899 8915.687672944112 8650.474995604105 7702.6835770439675 8164.145631506069 8221.903168795463 7325.588063549915 7278.100210427575 1.057280478537651 0.8888298354441976 1.0555559077397842 1.112958844902745 1.225002049321925 1.1885622271606378 1.0583371146783713 1.1217413054864271 1.1296771040629079 1.0065247594494924 1.0 12.829346200102673 -5.980521790149936 19.57059157357926 1.0899336390265622 0.9728381314328821 0.3025090448636891 0.07466522218343252 21.173409039597693 21269.133337946812 0.01137932699759177 0.03535162674195945 1.045871213944939e-06 5.980521790149936 -0.11709550759368004 KQPPVSPGTALVGS(ph)QKEPSEVPTPK ddPTM_A549_MK2206_60min_R1 3 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGT(0.001)ALVGS(0.993)QKEPS(0.006)EVPTPK;KQPPVSPGTALVGS(1)QKEPSEVPTPK;KQPPVS(0.022)PGT(0.019)ALVGS(0.959)QKEPSEVPTPK 321.73 3.116799999999999e-210 131140300.0 12895.810000000001 14573.119999999999 14739.630000000001 12093.89 16574.0 13479.01 11250.11 12457.24 21307.300000000003 20455.7 19478.879999999997 True False 15072.30745571603 15314.82956117174 16829.931172155244 15056.89359291535 14135.986555445032 14905.349891557296 13294.109363217429 14223.091918697495 16481.230570766314 15834.743162899345 14641.736506261046 1.0294070958913148 1.045970848787155 1.1494491220326557 1.0283543612792634 0.9654583354508703 1.0180042432250795 0.9079598828685825 0.9714074496980237 1.1256335997932123 1.0814798610894378 1.0 13.83779904658701 -4.824921394657484 8.06513969707797 1.0399611573968426 0.7564802852925883 0.0 0.06807458799761303 125817.51616361094 140019.25919688217 0.010486200898721142 622261.4975524105 1.4965064925093691e-05 4.824921394657484 -0.2834808721042543 KQPPVSPGTALVGS(ph)QKEPSEVPTPK ddPTM_A549_PD325901_60min_R1 4 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGS(1)QKEPSEVPTPK;KQPPVSPGTALVGS(0.999)QKEPSEVPTPK;KQPPVSPGTALVGS(1)QKEPSEVPTPK;KQPPVSPGT(0.001)ALVGS(0.999)QKEPSEVPTPK 297.66 5.191299999999998e-171 495773200.0 18442.76 18990.81 20879.6 19478.0 21197.9 23031.5 21438.7 24094.0 25212.1 23026.0 24752.7 True False 20315.055418357675 20591.232206953482 22296.615215234557 20681.11182225243 19709.03263278501 22843.9391000695 22254.561460206773 23613.42626862266 24152.523114439457 21572.13443035826 21708.274820293376 0.9358208142531304 0.9485430038735433 1.0271021257935793 0.9526833428015786 0.9079041423577597 1.0523148103282016 1.0251649034497534 1.0877615316786162 1.1125952345075871 0.9937286407574014 1.0 14.405957457547515 -7.285052056230643 22.436995176920764 1.0549034448982346 0.9580271672785701 0.5231349186126502 0.04258800545811649 142.55739053845545 135459.11113306446 0.007454618661647135 0.011924004290932794 5.187378572593678e-08 7.285052056230643 -0.09687627761966455 KQPPVSPGTALVGSQKEPS(ph)EVPTPK ddPTM_A549_MK2206_60min_R1 1 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGT(0.001)ALVGS(0.322)QKEPS(0.586)EVPT(0.09)PK 60.176 8.2101e-05 59013000.0 1340.5 1330.1 1540.6 1575.6 2077.3 1903.2 1546.1 1183.2 2168.3 2369.7 2172.8 True False 1566.7436279215763 1397.796408683557 1759.080245828584 1961.6220707313717 1771.73192178267 2104.595360758085 1827.00635695744 1350.9222233980308 1677.183512063594 1834.3831241718733 1633.2337937706884 0.9592892541761553 0.8558458770660317 1.077053544041206 1.2010663006197815 1.0847999401801671 1.288606302897488 1.1186434936172756 0.8271456472126518 1.026909630734151 1.1231601569649048 1.0 10.673515608918114 -5.766806826856568 24.9601786361806 1.0466096824288034 0.9075675555296946 0.2019231838350316 0.11752318485920057 156.92712919627508 729773.1090356972 0.016814573062476787 0.05458424998258421 1.7107760949831364e-06 5.766806826856568 -0.13904212689910878 KQPPVSPGTALVGSQKEPSEVPT(ph)PK ddPTM_A549_MK2206_60min_R1 5 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGSQKEPS(0.002)EVPT(0.998)PK;KQPPVSPGTALVGSQKEPS(0.133)EVPT(0.867)PK;KQPPVSPGTALVGS(0.011)QKEPS(0.025)EVPT(0.964)PK;KQPPVSPGTALVGSQKEPS(0.001)EVPT(0.999)PK;KQPPVSPGTALVGSQKEPS(0.025)EVPT(0.974)PK 209.47 6.1304999999999985e-81 936188100.0 14201.96 16151.9 16398.9 12825.66 20147.2 16097.03 14984.7 14378.769999999999 23862.3 26349.6 26347.4 True False 16598.90364341448 16973.962719657135 18724.51060841125 15967.94727576575 17183.57356883445 17800.40703025627 17707.22602490146 16417.00468063631 18457.527150262908 20397.207059408036 19804.61342875268 0.8381331805909377 0.8570711456056013 0.9454620599272431 0.8062741205836014 0.8676550860562136 0.8988010341273983 0.8940960190211945 0.8289485043319158 0.9319811879521945 1.029921999375914 1.0 14.273548920738238 -9.417863605805442 0.7313853053912845 0.9918366632357315 0.866591890373453 0.6491286749044389 0.040156774001872834 0.26228521389276416 0.30523769723009025 0.013225462188773077 0.008826442616152827 3.820642428053142e-10 9.417863605805442 -0.12524477286227853 KQPPVSPGTALVGSQKEPSEVPT(ph)PK ddPTM_A549_PD325901_60min_R1 3 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGSQKEPSEVPT(1)PK;KQPPVSPGTALVGSQKEPSEVPT(1)PK;KQPPVSPGTALVGSQKEPS(0.005)EVPT(0.995)PK 230.63 8.886399999999998e-96 1400473600.0 11637.599999999999 9743.0 10574.199999999999 9075.3 11517.0 15014.6 12947.099999999999 12624.5 14383.800000000001 12592.2 14596.6 True False 12819.040584851688 10564.07680306148 11291.828799830131 9635.860669498274 10708.08565149306 14892.326075674768 13439.80897542496 12372.69444377134 13779.298907011897 11797.126343001704 12801.31073547106 1.0013850026569155 0.8252339952806205 0.8820837985396046 0.7527245349023781 0.8364835345979145 1.1633438468460677 1.0498775674732033 0.9665177808306715 1.076397502705011 0.9215561270857313 1.0 13.644003915927124 -7.238969525659909 24.997006831487138 1.0402243339049677 0.8529874778718834 0.5210533056715395 0.0807108300769128 408.5036532650752 454447.64533990005 0.010524880807947364 0.018221571632294244 5.7680693637723506e-08 7.238969525659909 -0.18723685603308426 KQQHVISTEEGDMMETNST(ph)DDEKSTAK ddPTM_A549_PD325901_60min_R1 1 KQQHVISTEEGDMMETNSTDDEKSTAK 27 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 KQQHVISTEEGDMMET(0.001)NS(0.412)T(0.58)DDEKS(0.003)T(0.004)AK 101.85 1.2112e-12 3995600.0 489.79 395.79 424.59 639.05 602.73 721.57 426.3 537.93 581.25 437.66 451.71 True False 539.5131202356591 429.1446123251258 453.4052306670839 678.5226671121476 560.3963241056192 715.6937731557707 442.52307978031104 527.2005641520788 556.8220838513232 410.0260729084769 396.1525336256134 1.361882291394177 1.0832812512836074 1.144521849999267 1.7127813393044962 1.4145973496037905 1.806611626601742 1.1170522518947725 1.3308019497618895 1.4055749656710554 1.0350207006273366 1.0 8.629912218903371 -10.731300272929543 0.7091586950857547 0.9648244899473613 1.379929725626977 0.28999891364965613 0.21554287205825268 0.9249972478900231 0.7120692264856484 0.23068593040606145 0.04302412838719193 1.8565204056629613e-11 10.731300272929543 0.41510523567961566 KQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLS(ph)PGGSR ddPTM_A549_PD325901_60min_R1 1 KQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSR 41 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KQQPQLPRPPTTGGSEGAGAAPCPPNPANS(0.003)WVPGLS(0.801)PGGS(0.196)R 71.831 8.110199999999999e-06 3925200.0 517.23 296.16 469.03 416.02 808.78 676.68 543.57 490.37 819.22 546.59 475.47 True False 569.7388088353985 321.1184425736106 500.86119630651285 441.7166105500285 751.9740829395289 671.1693424325388 564.2558538029173 480.58918566217704 784.7910323142893 512.0782141183672 416.99020425266326 1.3663122131525698 0.7700862977084183 1.2011342021910671 1.059297331316644 1.8033375251277888 1.609556616888446 1.3531633310527904 1.152519125775381 1.8820370941825955 1.2280341573877551 1.0 8.703869682696228 -6.691525460921399 24.999399527497403 1.4374576702101147 1.0829766733384039 0.2431207281783352 0.28241849426341264 65.93071583015322 23573.841525577023 0.050670594447669 0.10547925305244746 2.0345789132566508e-07 6.691525460921399 -0.35448099687171086 KQQQEKEDAEHHPDEDVDES(ph)ES ddPTM_A549_MK2206_60min_R1 1 KQQQEKEDAEHHPDEDVDESES 22 2 Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 Q5JY65 CRNKL1 Crooked neck-like protein 1 1 KQQQEKEDAEHHPDEDVDES(0.89)ES(0.11) 56.303000000000004 0.0010463 3266300.0 435.93 460.51 416.51 525.25 375.41 488.52 261.74 468.5 505.29 705.42 620.03 True False 509.5043265347651 483.94799200275565 475.57738101393176 653.9362735793685 320.1876863026198 540.2148621466687 309.29476998256297 534.9113097210758 390.8426217823237 546.0651320645328 466.0594390425445 1.0932174822625031 1.0383825569480165 1.020422163299472 1.403117754513869 0.6870104100035002 1.1591115143091326 0.6636380342772734 1.1477319520016118 0.8386111063113677 1.1716641404932149 1.0 8.864370150970698 -6.769082511482214 24.999849607203938 0.9238068913976889 1.1231589082934808 0.16905849570914333 0.19087920600399966 181.21519850740006 592736.952400177 0.02301085581623893 0.04408115675723691 1.701835146514047e-07 6.769082511482214 0.19935201689579185 KQQQEKEDAEHHPDEDVDES(ph)ES ddPTM_A549_PD325901_60min_R1 1 KQQQEKEDAEHHPDEDVDESES 22 2 Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 Q5JY65 CRNKL1 Crooked neck-like protein 1 1 KQQQEKEDAEHHPDEDVDES(0.537)ES(0.463) 63.696999999999996 0.00024282 4987900.0 514.69 360.63 531.59 317.07 454.0 493.7 495.13 614.34 643.83 624.13 639.52 True False 566.940949905248 391.021555731095 567.6668941103537 336.6546937817835 422.1126062149733 489.67947088571344 513.9724430955324 602.0865067595934 616.7720640791355 584.7223252853078 560.8630942512946 1.0108366118510024 0.6971782592560778 1.0121309459096104 0.6002439761724552 0.7526125547241763 0.8730819979150075 0.9163955488667742 1.0734999555699571 1.0996838094731027 1.0425402050492611 1.0 9.131504844121997 -7.9524727094998395 2.1930821864278687 1.0501952724398975 0.8103890152433277 0.45578907483808306 0.11684749204533916 0.19446117801169044 1.8927257881360895 0.018264258334055893 0.025869973449041784 1.1156482550329375e-08 7.9524727094998395 -0.23980625719656978 KQQQEPTGEPS(ph)PK ddPTM_A549_MK2206_60min_R1 9 KQQQEPTGEPSPK 13 1 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPT(0.001)GEPS(0.999)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPT(0.001)GEPS(0.999)PK 151.41 2.3037e-13 1292241400.0 40367.11 43799.89000000001 43066.64 38114.12 52408.490000000005 41039.77 36418.1 40334.09 59069.03 55663.6 55605.19 True False 47180.09128691483 46029.11731654379 49174.137140212355 47452.081111007865 44699.27054610693 45382.57122140545 43034.797366478095 46051.570775470114 45689.98901885795 43089.15409995082 41796.886697827664 1.1287943915058858 1.1012570780525643 1.1765023910923995 1.1353018097750835 1.0694401922626957 1.0857883159935007 1.0296172936898376 1.101794282153163 1.0931433565656608 1.0309177908743696 1.0 15.351107864609666 -14.999999999957037 0.10538364950424121 0.6635780167473238 1.170625697475429 0.5843167289060148 0.03186262709098676 49.529310143406484 0.37236713511367336 3.645292250676797 0.19359574254839107 1.0000000000989258e-15 14.999999999957037 0.5070476807281052 KQQQEPTGEPS(ph)PK ddPTM_A549_PD325901_60min_R1 6 KQQQEPTGEPSPK 13 1 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 KQQQEPTGEPS(1)PK;KQQQEPT(0.001)GEPS(0.999)PK;KQQQEPT(0.003)GEPS(0.997)PK;KQQQEPTGEPS(1)PK;KQQQEPT(0.066)GEPS(0.934)PK;KQQQEPT(0.002)GEPS(0.998)PK 180.11 6.9763e-23 2218523700.0 29548.4 26546.500000000004 29971.0 28274.399999999998 33384.7 30688.3 29961.900000000005 32029.600000000002 32223.6 33947.7 33447.7 True False 32548.131815617602 28783.66671994984 32005.012290263945 30020.845472178567 31039.873842962625 30438.38465947344 31102.11650028079 31390.744501264886 30869.354152587508 31804.236428449283 29333.844942439668 1.10957605044566 0.981244251356431 1.0910609350075238 1.0234200641302553 1.0581590617892271 1.0376541063471616 1.060280933553406 1.070120352884573 1.052345991913467 1.0842164227313924 1.0 14.840278564719728 -10.541451566098528 0.820332196819703 0.999538595729411 1.052033876679858 0.0 0.04046615395502582 0.6180988541601354 0.7375830781670603 0.019665991632222327 0.005371032261678802 2.8744081388754734e-11 10.541451566098528 0.05249528095044709 KQQQEPTGEPS(ph)PKRPR ddPTM_A549_MK2206_60min_R1 2 KQQQEPTGEPSPKRPR 16 3 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 KQQQEPTGEPS(1)PKRPR;KQQQEPTGEPS(1)PKRPR 108.17 1.1515000000000001e-07 39421000.0 2236.66 2854.3999999999996 2846.5 2492.8 2746.5 2125.0 2331.82 1110.9099999999999 3259.5 4830.5 4898.9 True False 2614.153526913147 2999.6767678718516 3250.176502499718 3103.5361119060453 2342.4934882665493 2349.866089539161 2755.481510433025 1268.384894519189 2521.228454351925 3739.2866950720486 3682.3679272382283 0.70991100796214 0.8146053917327065 0.8826321993677982 0.8428098911435213 0.6361378152735044 0.6381399512409826 0.7482906555998692 0.3444481701942468 0.6846758673142266 1.0154571104676413 1.0 11.846418066777144 -10.560075754565016 1.027231051912596 0.9879704124915318 0.703773589859734 0.4210709416978411 0.137410717652781 0.4237020927518092 0.8439021932487349 0.07876990191506977 0.025966161707440108 2.75374832145449e-11 10.560075754565016 -0.2841968226317978 KQQQEPTGEPS(ph)PKRPR ddPTM_A549_PD325901_60min_R1 2 KQQQEPTGEPSPKRPR 16 3 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 KQQQEPTGEPS(1)PKRPR;KQQQEPT(0.002)GEPS(0.998)PKRPR 120.56 1.7215e-08 59911000.0 2339.63 2182.2 2835.7 2837.9 2365.1 4804.6 3870.2999999999997 3935.3 3491.2 2442.3999999999996 3748.7 True False 2577.1475152554262 2366.101652431565 3028.1476544493494 3013.190637661472 2198.9835351520583 4765.472930560056 4017.586384409421 3856.8073543168725 3344.477004975035 2288.186447177408 3287.6336649672076 0.7838913266758789 0.7196974765298754 0.9210721032325095 0.9165226253064077 0.6688651350009801 1.4495145798452544 1.2220298226108761 1.173125642134262 1.0172900468241173 0.6959979974533541 1.0 11.682833835756057 -7.202495067803531 24.999974389702867 1.067509568926142 0.8104132639683989 0.37453681242039005 0.1855050427730386 216.11063164880295 91658.58800856651 0.023647263560116975 0.04095825698676434 6.273428205518224e-08 7.202495067803531 -0.25709630495774316 KQQQEPTGEPSPK ddPTM_A549_MK2206_60min_R1 2 KQQQEPTGEPSPK 13 1 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 0 ; 88.552 0.0001926 5147200.0 1274.7800000000002 1402.19 1070.42 1266.0 1477.9 1336.74 1514.81 1138.2 1442.47 2072.94 1879.37 False True 1489.9316986213123 1473.5554817622717 1222.221651784911 1576.1700568329 1260.5028677622913 1478.192939543802 1790.0313689817604 1299.5433355913092 1115.7528481512566 1604.6614142806454 1412.6705610267022 1.0546915464412723 1.0430991643878524 0.8651851928567291 1.115737879953674 0.8922836665090421 1.0463819239423233 1.267125838370129 0.919919598697396 0.7898181493499437 1.1359063171206796 1.0 10.4642093487861 -8.493656354754542 24.97777336043412 0.8983327719529596 1.0358303185495883 0.0019477402369884045 0.13096876534268037 797.5460650966448 681701.9674520924 0.01988653940652135 0.0240204159812478 3.208807360998054e-09 8.493656354754542 0.13749754659662872 KQQQEPTGEPSPK ddPTM_A549_PD325901_60min_R1 4 KQQQEPTGEPSPK 13 1 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 0 ;;; 75.669 0.0010628 9680900.0 3996.6399999999994 4683.72 4387.3099999999995 4997.05 5817.579999999999 7118.819999999999 5223.3 5408.56 5210.17 4836.43 5941.53 False True 4402.375950629135 5078.433521916769 4685.059239638247 5305.706429376035 5408.973250361466 7060.846690157245 5422.075539799434 5300.682027866758 4991.204673754236 4531.056984409692 5210.75947646187 0.844862629049685 0.974605246098415 0.8991125498694913 1.018221327110388 1.038039325130045 1.3550513551916223 1.040553793413825 1.0172570911804868 0.9578651051349788 0.8695578840047135 1.0 12.34727794758273 -6.267152342425136 22.02554281077467 1.01964004772977 0.913034641287672 0.18970587453547005 0.11624545969473439 134.2559941829998 517615.56784672075 0.01634861222854639 0.03910512784904317 5.405646696540323e-07 6.267152342425136 -0.10660540644209804 KQRDS(ph)EIMQQK ddPTM_A549_PD325901_60min_R1 2 KQRDSEIMQQK 11 2 P84101-4;P84101 P84101-4 SERF2 Small EDRK-rich factor 2 1 KQRDS(1)EIMQQK;KQRDS(1)EIMQQK 68.277 0.0016129000000000002 9565100.0 2577.4 2599.0 2786.5 2651.2 2820.0 3094.2 3633.7 2949.6 3078.9 3511.6 3942.8 True False 2839.0557506184027 2818.0268511912923 2975.6086465857165 2814.958602687934 2621.9329284718615 3069.001861078739 3771.9824419369334 2890.767914083565 2949.504540163164 3289.8769767065937 3457.8605954684836 0.8210440161581346 0.8149625392314278 0.8605345890708386 0.8140752135516769 0.7582529301232956 0.8875435479095534 1.0908428312234755 0.8359989751674513 0.8529853817786875 0.9514197828038435 1.0 11.75566399219627 -7.515504107309291 24.941541217479376 0.9336662501520967 0.8170988253045351 0.45864896955931356 0.06798857289211618 298.4747396601026 1009462.5741018204 0.01179649247450538 0.01791414543672012 3.0513771708211885e-08 7.515504107309291 -0.11656742484756155 KQS(ph)AGPNS(ph)PTGGGGGGGSGGTR ddPTM_A549_MK2206_60min_R1 1 KQSAGPNSPTGGGGGGGSGGTR 22 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 2 KQS(0.997)AGPNS(0.812)PT(0.121)GGGGGGGS(0.037)GGT(0.032)R 40.067 0.023972 6767100.0 862.27 906.39 596.85 598.46 1051.1 898.25 522.11 357.09 915.0 1158.3 1239.6 True False 1007.8000955225195 952.5213794952937 681.492304766189 745.0827268658899 896.4845823837508 993.3022187899071 616.970628698693 407.7086010422605 707.7539609547513 896.6392255257125 931.7731087804422 1.0815938837745445 1.022267513968082 0.7313929736158249 0.7996396545947722 0.9621275543754648 1.0660344341660577 0.6621468497907386 0.4375621030487699 0.7595775777228644 0.9622935208972548 1.0 9.863834884259598 -7.7507004589191295 24.999903435778855 0.8274792041471885 0.9320270404292625 0.16522726143318944 0.17557107357299478 544.242048747585 1266976.5177439312 0.03117361643948167 0.04597724754164494 1.7754135948774847e-08 7.7507004589191295 0.10454783628207409 KQS(ph)DSDLIPER ddPTM_A549_MK2206_60min_R1 2 KQSDSDLIPER 11 1 Q9P2M4;C9JP26 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 KQS(0.993)DS(0.007)DLIPER;KQS(0.796)DS(0.204)DLIPER 94.461 0.00012027 13482300.0 4213.9 4300.6 4312.5 3496.9 5653.9 3889.2 4110.7 4260.1 5161.299999999999 5560.4 6116.5 True False 4925.10330003635 4519.482170652213 4924.077346576505 4353.640656981806 4822.218799676039 4300.752562557978 4857.56098023734 4863.982221009084 3992.273790902466 4304.3017781344815 4597.604243187785 1.0712325462405374 0.9830080910832366 1.0710093966596737 0.9469368015815071 1.0488546957518283 0.9354333985858726 1.056541782045449 1.0579384313506297 0.868337851570798 0.9362053692446699 1.0 12.166666570430374 -8.747847880506775 24.999951438199385 0.937826202082014 1.0184883182345987 0.3406020812369188 0.053462269794525875 230.3740692112066 423745.6959226026 0.010361295162450612 0.011717274018111337 1.7871134340231338e-09 8.747847880506775 0.08066211615258478 KQS(ph)DSDLIPER ddPTM_A549_PD325901_60min_R1 1 KQSDSDLIPER 11 1 Q9P2M4;C9JP26 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 KQS(0.927)DS(0.073)DLIPER 50.806000000000004 0.049589999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KQS(ph)EELQSVQAQEGALGTK ddPTM_A549_MK2206_60min_R1 2 KQSEELQSVQAQEGALGTK 19 1 Q9BU64-2;Q9BU64 Q9BU64-2 CENPO Centromere protein O 1 KQS(1)EELQSVQAQEGALGTK;KQS(0.996)EELQS(0.004)VQAQEGALGTK 183.58 9.215699999999999e-44 16736300.0 5645.4 6762.0 6163.3 4892.299999999999 7307.7 5544.200000000001 5327.4 5938.9 8167.4 7779.1 7787.5 True False 6598.20550322154 7106.156917162785 7037.34861684753 6090.913719623693 6232.747010451655 6130.883564057894 6295.319621017446 6780.757262118463 6317.496940657748 6021.795907180409 5853.648825933925 1.12719531004131 1.2139704872078705 1.2022157164039904 1.0405328199120167 1.0647627139568365 1.0473610129968358 1.075452219328011 1.158381287254044 1.0792408510515352 1.0287251740318837 1.0 12.515120482359471 -2.0000000025284668 0.05866166840669927 0.8478596285122655 1.6335254264861092 0.4280353567945395 0.05144370528057241 192.79510664218694 0.82286101634611 2.246551698239065 12.966079538805344 0.009999999941779901 2.0000000025284668 0.7856657979738437 KQS(ph)EELQSVQAQEGALGTK ddPTM_A549_PD325901_60min_R1 2 KQSEELQSVQAQEGALGTK 19 1 Q9BU64-2;Q9BU64 Q9BU64-2 CENPO Centromere protein O 1 KQS(0.999)EELQS(0.001)VQAQEGALGTK;KQS(0.974)EELQS(0.026)VQAQEGALGTK 205.07 1.9446e-55 38268000.0 8451.0 9533.2 9292.8 9080.6 11410.1 9474.5 10608.1 10619.5 10571.1 13503.0 14107.4 True False 9308.939298702615 10336.596220768304 9923.465290145972 9641.488038461099 10608.693938708087 9397.34281326046 11011.797050475057 10407.685741663412 10126.833428990494 12650.4182755636 12372.279234176747 0.7524029422960266 0.8354641877314615 0.8020725286197665 0.779281477242107 0.8574567173850236 0.7595482316064749 0.8900378695023677 0.8412100587669884 0.8185099315424831 1.0224808247633572 1.0 13.594823679131617 -12.967766464409547 0.2531803612154041 1.3754636749393618 0.7931550290461157 0.8118587020165997 0.03703370339449835 5.039691073258195 0.15833533475430847 1.0127060121876739 0.019169335315662558 1.0770442229272716e-13 12.967766464409547 -0.5823086458932462 KQS(ph)ESEDTLPSFSS ddPTM_A549_MK2206_60min_R1 2 KQSESEDTLPSFSS 14 1 Q9HB20 Q9HB20 PLEKHA3 Pleckstrin homology domain-containing family A member 3 1 KQS(0.978)ES(0.022)EDT(0.001)LPSFSS;KQS(0.915)ES(0.067)EDT(0.018)LPSFSS 112.15 6.156799999999999e-06 9818500.0 3652.8 3077.3 3583.2 2879.8 5057.5 3405.7 3090.2 3894.7 5457.4 4909.8 6953.0 True False 4269.303337614277 3233.9214257889753 4091.351640174597 3585.3511292791345 4313.548449629739 3766.088913479303 3651.6493398033 4446.785652018516 4221.307613677004 3800.672769995806 5226.378206962261 0.8168760791033018 0.6187691165329258 0.7828273190647299 0.6860106535158419 0.8253418101054174 0.7205924952890608 0.6986959602232375 0.85083502875754 0.8076927169284528 0.7272096697733781 1.0 12.351595813752834 -10.354853334869157 0.3349736339167057 1.0738467444098942 0.7183189720795056 0.0 0.10196654584210424 0.9313560109883892 0.16071002957135236 0.1233398168454294 0.02537534437146325 4.4171959482556426e-11 10.354853334869157 -0.3555277723303887 KQS(ph)FDDNDS(ph)EELEDKDSK ddPTM_A549_PD325901_60min_R1 2 KQSFDDNDSEELEDKDSK 18 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 2 KQS(1)FDDNDS(1)EELEDKDSK;KQS(1)FDDNDS(0.999)EELEDKDS(0.001)K 134.76 2.9735e-13 35613000.0 14498.0 13438.0 14879.0 14098.0 19068.0 14193.0 17034.0 14816.0 19077.0 16698.0 20216.0 True False 15969.826287136504 14570.467420665102 15888.778414695455 14968.801441118945 17728.729461028895 14077.416913674155 17682.23819136245 14520.483257072843 18275.26003205453 15643.685430301484 17729.560159782617 0.9007457682657093 0.8218177602463292 0.8961744268612621 0.8442849854264224 0.9999531461160776 0.7940082431151951 0.997330900033972 0.818998504543323 1.0307790981476106 0.8823504525389925 1.0 14.11386912542105 -8.77585133022532 24.999769710956105 1.0145345872111082 0.8857836876784256 0.14711534572955565 0.07535000428445895 134.74098872956424 233728.38065137103 0.009876560451810854 0.010537331753371806 1.6755163486744926e-09 8.77585133022532 -0.1287508995326826 KQS(ph)LGEDHVILEEQK ddPTM_A549_MK2206_60min_R1 2 KQSLGEDHVILEEQK 15 1 Q9HBD1 Q9HBD1 RC3H2 Roquin-2 1 KQS(1)LGEDHVILEEQK;KQS(1)LGEDHVILEEQK 116.82 1.9872e-07 9359100.0 1679.6100000000001 1903.29 2111.3 1531.19 2144.37 1894.46 1683.46 1774.41 2521.2 2482.9 2319.7 True False 1963.087105478074 2000.159331391121 2410.714087380169 1906.3316187377318 1828.9360136297612 2094.930499759228 1989.3228909408012 2025.9380514027202 1950.152225529093 1922.0111655510586 1743.6544695369412 1.125846398913775 1.1471076215704017 1.3825641085990952 1.0932966663079713 1.0489096581821444 1.2014596563478397 1.140892834960072 1.1618919268682542 1.1184281402077276 1.1022890137525259 1.0 10.76789846211965 -10.868640416740496 0.2512331069456834 0.8988358067533979 1.192519211898708 0.1614242623135178 0.08522866695432957 4.51443663537831 0.353873343057663 0.4046743732876972 0.05963990829147611 1.3531925037133771e-11 10.868640416740496 0.2936834051453101 KQS(ph)LGEDHVILEEQK ddPTM_A549_PD325901_60min_R1 1 KQSLGEDHVILEEQK 15 1 Q9HBD1 Q9HBD1 RC3H2 Roquin-2 1 KQS(1)LGEDHVILEEQK 75.23899999999999 0.00015056 3795000.0 1019.1 1331.5 1055.2 1055.1 1243.6 1279.6 1212.0 1585.2 1654.6 1270.3 1159.1 True False 1122.5582817782317 1443.710177899656 1126.812217433069 1120.271130694041 1156.2538261870948 1269.1793618500285 1258.1233232318486 1553.5819424346566 1585.0629160264941 1190.0930412092453 1016.5380481402854 1.1042953914336076 1.4202224703156605 1.1084801198484657 1.1020454499893348 1.1374427433409047 1.2485310945044703 1.2376549264767154 1.5283067321256405 1.5592755420481326 1.1707314284856052 1.0 9.989448499683409 -8.005029642547658 21.412428428853442 1.2956628559896548 1.1923926779512948 0.10875979755808507 0.1672455216603317 101.14878220521287 430632.8378731284 0.036314997029433686 0.04930865645237003 9.884856237738718e-09 8.005029642547658 -0.10327017803836003 KQS(ph)LGELIGTLNAAK ddPTM_A549_MK2206_60min_R1 4 KQSLGELIGTLNAAK 15 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 KQS(1)LGELIGTLNAAK;KQS(0.999)LGELIGT(0.001)LNAAK;KQS(1)LGELIGTLNAAK;KQS(0.672)LGELIGT(0.328)LNAAK 241.98 9.076599999999999e-65 941735000.0 64207.1 69813.20000000001 63074.4 58867.9 88568.2 67636.2 61848.4 62826.4 95370.6 89207.1 91097.0 True False 75043.68876711937 73366.3936837133 72019.29836264458 73290.53814268055 75539.93510558497 74793.4177907241 73085.45370134301 71732.23459778055 73769.31137555321 69055.15415297837 68475.10075070351 1.095926664501452 1.0714317011495529 1.0517589251141723 1.070323918317529 1.1031737708660307 1.0922717450686725 1.067328896198698 1.0475666893712978 1.0773158500945368 1.008471012030879 1.0 16.063291863188148 -10.95882085575608 0.48739543150574266 0.9764012828221803 1.0777816876380473 0.7466521366404877 0.01606474319344481 0.7742285390807504 0.2116083026011344 0.03879473409923438 0.004114751035176247 1.0994592672103766e-11 10.95882085575608 0.10138040481586696 KQS(ph)LGELIGTLNAAK ddPTM_A549_PD325901_60min_R1 3 KQSLGELIGTLNAAK 15 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK 313.59 2.3783999999999993e-143 1160480000.0 123062.0 124851.3 133284.0 125569.6 150695.0 144525.0 143166.0 153320.0 142335.0 152885.0 156086.0 True False 135555.16364654372 135372.9572166755 142329.4537418018 133325.74900274698 140110.70306952743 143348.0363171111 148614.26047344098 150261.91232278707 136353.1549332956 143231.81500848266 136888.411510676 0.9902603306633572 0.9889292725565575 1.0397480120565314 0.9739739655927618 1.0235395496469775 1.0471889821435418 1.085659909654591 1.0976963693604411 0.9960898327953885 1.0463399598826664 1.0 17.062640792736566 -5.713243865584771 24.234927635452458 1.0160182765242791 0.9895946032335314 0.01384160739135265 0.038676154471885875 220.2683822861371 110756.70915998185 0.005833656447823973 0.022593540541612594 1.9353349270708756e-06 5.713243865584771 -0.026423673290747685 KQS(ph)LGKPDQK ddPTM_A549_PD325901_60min_R1 1 KQSLGKPDQK 10 2 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 1 KQS(1)LGKPDQK 61.211999999999996 0.0015674 5867600.0 3420.8 3521.0 2799.2 3193.8 4472.2 3963.8 3437.5 4156.0 3791.1 3790.0 4019.6 True False 3768.0770977401385 3817.727026950577 2989.1705449570186 3391.073772353927 4158.088100252436 3931.520126993704 3568.3159435721773 4073.105319681072 3631.7732509053776 3550.698753194554 3525.2146823437956 1.0688929433468919 1.0829771718788768 0.8479400020453848 0.9619481586010293 1.1795276245382775 1.1152569364597589 1.0122265635180339 1.1554205024963196 1.0302275402106107 1.0072290833742399 1.0 11.783495403654852 KQS(ph)LYLK ddPTM_A549_MK2206_60min_R1 2 KQSLYLK 7 1 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 KQS(0.989)LY(0.011)LK;KQS(0.999)LY(0.001)LK 74.16199999999999 0.0078256 52451000.0 7665.4 8407.9 7961.200000000001 7034.8 10557.7 8418.599999999999 7724.2 7928.299999999999 11589.5 12556.599999999999 11270.0 True False 8959.13211896311 8835.826196955486 9090.217871667219 8758.326315804168 9004.676315700623 9309.450664185588 9127.587156335723 9052.160804400435 8964.496754628513 9720.055339062554 8471.347963823482 1.057580465024302 1.0430248213966056 1.0730544785182468 1.0338763503997492 1.062956728274496 1.098933806513578 1.077465734534183 1.0685620332274497 1.058213733270195 1.147403622253698 1.0 13.048375834620328 -10.361349351189245 0.7515042629123241 1.000082709059252 1.0642674014288744 0.0 0.04637682990938949 0.32249158378727205 0.3338179477448537 0.011480075109318255 0.0035301339967252566 4.3516168408021694e-11 10.361349351189245 0.06418469236962254 KQS(ph)LYLK ddPTM_A549_PD325901_60min_R1 2 KQSLYLK 7 1 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 KQS(1)LYLK;KQS(1)LYLK 93.111 0.0050988 104250000.0 5830.6 6045.9 7021.5 6894.9 7336.4 8142.1 7524.2 7853.4 8771.8 7951.7 7513.6 True False 6422.518219739139 6555.409211087892 7498.021213709526 7320.782313545962 6821.116573206016 8075.793437104656 7810.537548400222 7696.757776126882 8403.151750756193 7449.628304954388 6589.474832634677 0.9746631382415063 0.9948302979505933 1.1378784203826429 1.1109811478889715 1.0351532931614098 1.2255594933163592 1.1853050124295452 1.1680381170906573 1.2752384619695636 1.1305344498866223 1.0 12.685947774698965 -5.741931370448598 5.13202968567656 1.1380118385051101 0.980615884348614 0.39922454444314903 0.07394205892359977 0.18646958831995386 13.150712504777543 0.014297945963660463 0.054643838736720275 1.8116263529472679e-06 5.741931370448598 -0.1573959541564961 KQS(ph)MPR ddPTM_A549_PD325901_60min_R1 2 KQSMPR 6 1 A0A1B0GVW3;F5H7N0;P28472-4;P28472-3;P28472-2;P28472 A0A1B0GVW3 GABRB3 Gamma-aminobutyric acid receptor subunit beta-3 1 KQS(1)MPR;KQS(1)MPR 73.931 0.019524 32843000.0 4263.5 4504.4 4549.5 4142.7 5590.6 4872.7 5252.2 5242.6 6848.6 5410.7 6026.1 True False 4696.327381377188 4884.001596193177 4858.256428365948 4398.5851702456675 5197.935542522978 4833.018346738538 5452.075345114123 5138.03223025986 6560.77715864804 5069.067478604164 5284.927902595272 0.8886265750325488 0.9241377907529803 0.9192663585779858 0.8322885858264315 0.9835395370238496 0.914490875904889 1.0316271944668856 0.9722047916182024 1.2414128025145312 0.9591554647538133 1.0 12.36766807504436 -8.088784773678375 1.5261900748315664 1.1102197228470572 0.9085561624901158 0.3021302207727278 0.08429921977204187 0.25035353635778623 1.153639526023515 0.016727190452552578 0.023147192938130716 8.151081327212393e-09 8.088784773678375 -0.20166356035694133 KQS(ph)PPKNVVEPK ddPTM_A549_MK2206_60min_R1 2 KQSPPKNVVEPK 12 2 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 KQS(1)PPKNVVEPK;KQS(1)PPKNVVEPK 54.598 0.0041611 5652800.0 3098.1 3572.8999999999996 3449.7 3854.3999999999996 4665.2 3481.2 3435.7 3388.8999999999996 4144.299999999999 4785.4 5260.0 True False 3620.9835387272165 3754.7453489102195 3938.9193327501403 4798.728173030591 3978.9552599530725 3849.5782733664623 4059.9222175788636 3869.286953070982 3205.6226670871856 3704.37481639536 3953.7968313852257 0.9158243817648549 0.9496556118172446 0.9962371615766931 1.213701254181374 1.0063631060574836 0.9736408919164796 1.0268413858171 0.9786256396273565 0.8107707107358082 0.9369158240479242 1.0 11.94902302374041 -8.534645469645138 24.569638573931837 0.9098025812294201 1.0139948803667527 0.20461498103059694 0.08229917447938974 224.77362885571844 469338.9425555685 0.016567547021180858 0.018793317975743493 2.9198095879633226e-09 8.534645469645138 0.10419229913733252 KQS(ph)PPKNVVEPK ddPTM_A549_PD325901_60min_R1 2 KQSPPKNVVEPK 12 2 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 KQS(1)PPKNVVEPK;KQS(1)PPKNVVEPK 53.777 0.0045184 8351500.0 4402.4 3954.3999999999996 4324.0 3802.6000000000004 5596.0 4900.6 4784.3 4958.5 4943.4 5132.6 4579.0 True False 4849.328407124408 4287.6511659680045 4617.45264232429 4037.4779656688115 5202.956265151967 4860.691138388751 4966.369154569416 4859.598827632003 4735.6460891365705 4808.526760065007 4015.8120286725616 1.2075586139243095 1.067692196585531 1.1498179220929825 1.0053951571541588 1.2956174810980432 1.210388111715345 1.2367035904843047 1.2101161092538382 1.1792499388229465 1.1973983656935454 1.0 11.971476026149821 -10.571742711963124 0.8837130332811491 1.00086426535688 1.1718009722243958 0.0 0.09471073359252434 0.4699406952758321 0.6611501962140157 0.050514352908533 0.014300412102773333 2.680756008322519e-11 10.571742711963124 0.17093670686751583 KQS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 KQSPPR 6 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KQS(1)PPR;KQS(1)PPR 85.212 0.016752 78625000.0 11227.8 8114.9 5192.4 3586.1000000000004 5842.4 5049.2 4644.5 5572.2 5846.1 12990.3 12806.400000000001 True False 13122.778146645189 8527.913748459672 5928.76039753365 4464.69466098615 4982.990699380483 5583.5029926123 5488.345530618226 6362.076414146807 4521.96768430336 10055.782207844826 9626.217441340646 1.3632330899038547 0.8859049570016764 0.6158972029939882 0.4638057147776573 0.5176478434800971 0.5800308404247602 0.5701456012252578 0.6609113551522641 0.4697554061975962 1.044624461178217 1.0 13.232753296579125 -5.334707697936319 2.632363330643098 0.6751194452178886 1.445273883544539 0.5500548557243194 0.18589891463759767 0.2695113153033858 2.664425982429064 0.030230219045172993 0.4194782710288355 4.626923318709296e-06 5.334707697936319 0.7701544383266503 KQS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 KQSPPR 6 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KQS(1)PPR;KQS(1)PPR 85.212 0.016752 161228000.0 16715.8 15507.5 12251.8 12520.9 14355.7 9275.9 8318.3 10006.8 12258.3 17172.699999999997 20821.0 True False 18412.77571047842 16814.37144857599 13083.280824058447 13294.287555972907 13347.40515647642 9200.360145814842 8634.857458448421 9807.20652381726 11743.12628038654 16088.412791288687 18260.14899519359 1.0083584594695807 0.92082334339122 0.7164936511472173 0.7280492376854214 0.7309581734513614 0.503849127859611 0.4728799015123741 0.5370825027987832 0.6431013396154406 0.8810668957588164 1.0 14.15641091670893 -5.632942459827439 3.77567887342619 0.7435998413601013 0.992099558565852 0.2709808369785499 0.15673635388680773 0.3158192189701332 8.193132235908191 0.028448056449193553 0.13152160827964393 2.3283997295725576e-06 5.632942459827439 0.2484997172057507 KQS(ph)SSEISLAVER ddPTM_A549_MK2206_60min_R1 1 KQSSSEISLAVER 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KQS(0.958)S(0.034)S(0.007)EISLAVER 65.107 0.0024308000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KQS(ph)SSEISLAVER ddPTM_A549_PD325901_60min_R1 2 KQSSSEISLAVER 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KQS(0.896)S(0.079)S(0.025)EISLAVER;KQS(0.859)S(0.055)S(0.086)EIS(0.001)LAVER 90.37899999999999 7.7392e-05 10020900.0 3794.6000000000004 3549.5 3299.8 3551.0 4173.1 3996.3 4048.6 4865.4 5070.0 4991.700000000001 5669.1 True False 4179.824998563124 3848.628821971332 3523.744271309366 3770.3372050938656 3879.995852413449 3963.7554577690426 4202.671688478926 4768.355780167536 4856.925531399928 4676.523210111151 4971.836639385814 0.8407003893594279 0.7740859366704302 0.7087409597079329 0.7583389154877033 0.7803948789622253 0.7972416926109417 0.8452956107178321 0.9590733014825252 0.9768875937967099 0.9406027489046493 1.0 12.279563178916563 -8.126382270062367 1.4628355958350363 0.9908946067921509 0.7682026187813137 0.8807808579000186 0.032998981681140425 0.0728924292121525 0.30721351008038095 0.005300853087765805 0.007251414312069629 7.475112444676475e-09 8.126382270062367 -0.22269198801083723 KQS(ph)VFSAPSLSAGASAAEPLDR ddPTM_A549_MK2206_60min_R1 2 KQSVFSAPSLSAGASAAEPLDR 22 1 Q14573 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 1 KQS(0.999)VFS(0.001)APSLSAGASAAEPLDR;KQS(0.994)VFS(0.006)APSLSAGASAAEPLDR 107.45 1.7632e-10 11011500.0 3107.5 4185.200000000001 4653.1 3545.8999999999996 5147.700000000001 3404.0 3217.6 3720.2 6114.299999999999 4875.299999999999 4660.9 True False 3631.9700289192847 4398.208803565467 5312.979548140322 4414.645659181502 4390.480149116959 3764.2090206076746 3802.196270710991 4247.549742634679 4729.420812530748 3773.966343957097 3503.469895704072 1.036677961289971 1.255386498099646 1.5164907095833924 1.2600780913216088 1.2531804981400105 1.0744231098498431 1.0852658603897853 1.212383685055491 1.3499247755289485 1.0772081554303365 1.0 11.774568784288762 -7.067855079331859 7.369881796943235 1.1606359042383534 1.2808916225029652 0.17240342336579517 0.13505101094460292 0.5016475510506777 48.24666383527949 0.024140504362121278 0.0420757308836884 8.553520895630436e-08 7.067855079331859 0.12025571826461179 KQSAGPNS(ph)PTGGGGGGGSGGTR ddPTM_A549_MK2206_60min_R1 2 KQSAGPNSPTGGGGGGGSGGTR 22 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 KQSAGPNS(0.952)PT(0.045)GGGGGGGS(0.002)GGT(0.002)R;KQS(0.002)AGPNS(0.985)PT(0.012)GGGGGGGSGGTR 59.18899999999999 0.00094479 28976000.0 1284.5300000000002 1073.44 796.78 1013.71 1209.12 945.51 524.66 1028.8999999999999 1583.43 1320.1799999999998 1502.06 True False 1501.327260256697 1128.073510967054 909.7753850910681 1262.0689955071707 1031.2600497115786 1045.5632406212571 619.983930690958 1174.7497258740982 1224.7856332181223 1021.9504210951702 1129.0570472529464 1.329717806473555 0.9991288869873446 0.8057833634753869 1.1178079961307972 0.9133817039809344 0.9260499663548144 0.5491165678469575 1.0404697696474456 1.0847863145605339 0.9051362139598065 1.0 10.140902666884319 -5.2647768147591805 6.055485996495307 0.9830283026662392 1.3382642475333366 0.30831090369411807 0.15550968881699795 0.12564590427973082 22.736719044775644 0.02168051910614164 0.18360653463441617 5.4352958121964065e-06 5.2647768147591805 0.3552359448670974 KQSAGPNS(ph)PTGGGGGGGSGGTR ddPTM_A549_PD325901_60min_R1 2 KQSAGPNSPTGGGGGGGSGGTR 22 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 KQS(0.001)AGPNS(0.974)PT(0.023)GGGGGGGS(0.001)GGT(0.001)R;KQS(0.007)AGPNS(0.935)PT(0.056)GGGGGGGS(0.001)GGT(0.001)R 50.986000000000004 0.0043146999999999994 50787000.0 1025.17 598.62 762.2 1068.01 837.4 979.49 977.12 882.3499999999999 924.89 1111.5900000000001 1367.65 True False 1129.2445037097339 649.0678082570729 813.9274754809378 1133.9785520733042 778.583912873169 971.5133581888748 1014.3048363005805 864.7508370598157 886.0200896916135 1041.404017694864 1199.4377202476594 0.9414782315471686 0.5411434018625441 0.6785908611519057 0.9454251212302718 0.6491240851691802 0.809973991803657 0.8456502736058253 0.7209635168729414 0.7386962030080799 0.8682435112010946 1.0 10.228142533562698 -10.745384648958064 0.720509108250354 1.0227258177322727 0.7562783874725361 0.1959182408277954 0.12157064793955119 0.7084241366123308 0.5631008657357723 0.11478483705153365 0.021319545483555826 1.797278383968302e-11 10.745384648958064 -0.2664474302597366 KQSEPFFK ddPTM_A549_MK2206_60min_R1 1 KQSEPFFK 8 1 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 46.606 0.039693 4149200.0 3100.5 2910.7 3464.9 3295.6 4649.0 3410.0 3516.9 3229.3 4932.1 4528.4 4885.9 False True 3623.788600052852 3058.842197395107 3956.2749213108286 4103.0221479451075 3965.1382584930593 3770.843936625196 4155.8752065090375 3687.0631643164816 3814.9872249452774 3505.4312948896104 3672.5961860199777 0.9867103314671742 0.8328828007388417 1.0772420165251753 1.1171993707240615 1.079655387539383 1.0267515799801803 1.1315905686360779 1.0039391693406352 1.0387712211506732 0.954483182287589 1.0 11.842584560406703 -5.772256698378854 24.999994102291677 1.0394358753226347 0.9097965510392786 0.4351482553982501 0.06000874620749013 122.80157276889825 283810.0881471487 0.00767510768191702 0.024202192966762497 1.6894420581886162e-06 5.772256698378854 -0.12963932428335612 KQSEPFFK ddPTM_A549_PD325901_60min_R1 2 KQSEPFFK 8 1 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 68.735 0.0074741 21836000.0 7770.2 7240.4 7919.799999999999 8463.8 9281.2 9928.8 8151.6 8368.599999999999 10062.400000000001 9148.599999999999 9497.1 False True 8559.024983881085 7850.573918186012 8457.285253626247 8986.589703315538 8629.320530401794 9847.943144683144 8461.81359872668 8201.681707960302 9639.512320938587 8570.955834690158 8329.016907077135 1.027615273131276 0.9425570875616074 1.0154001784340385 1.078949629178885 1.0360551103059343 1.1823656086368828 1.0159438614582121 0.9847118572891074 1.1573409477351317 1.0290477171930636 1.0 13.023930505705005 -6.101157805582849 3.9267671694477837 1.0703771864138256 0.9835928402348846 0.17684435441086999 0.06183603518060023 0.28145492176281234 7.69092715120845 0.009906424510565372 0.028716937542809552 7.922134188878284e-07 6.101157805582849 -0.08678434617894104 KQSFDDNDS(ph)EELEDK ddPTM_A549_MK2206_60min_R1 2 KQSFDDNDSEELEDK 15 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQSFDDNDS(1)EELEDK;KQSFDDNDS(1)EELEDK 132.13 5.3193e-15 5942600.0 3149.5 4138.4 3694.6 3651.5 4946.7 3682.6 3184.3 3465.8 5693.3 4662.6 5003.4 True False 3681.0586021178715 4349.0268834644285 4218.549835283839 4546.117663922065 4219.046982853864 4072.290287687963 3762.8460917531734 3957.0877635673555 4403.776640331896 3609.315421683665 3760.917693184951 0.9787660625459074 1.1563738529415768 1.1216809777379997 1.208778823360041 1.1218131655736778 1.0827916535018145 1.0005127468148842 1.0521601604677173 1.1709314054683648 0.9596900852746658 1.0 11.876869018338038 -7.287197721427884 5.272614715259753 1.0735133094290032 1.1250884408322628 0.12779985239577785 0.07573111609506944 0.39654935239715217 32.981683368960255 0.012115809792669723 0.01995315635803731 5.161813136896431e-08 7.287197721427884 0.05157513140325953 KQSFDDNDS(ph)EELEDK ddPTM_A549_PD325901_60min_R1 2 KQSFDDNDSEELEDK 15 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQSFDDNDS(1)EELEDK;KQSFDDNDS(1)EELEDK 144.72 5.888400000000001e-14 16973200.0 10370.8 11715.6 11757.5 11993.900000000001 12067.400000000001 11861.4 10749.5 12018.8 12913.2 12239.6 14184.900000000001 True False 11423.635981420555 12702.91472790177 12555.43465359108 12734.735962876752 11219.827454269978 11764.804691034631 11158.578104852104 11779.075605433794 12370.503110862637 11466.789567176804 12440.24722548972 0.9182804629488266 1.0211143313835316 1.009259255544805 1.02367225763678 0.9018974664169748 0.945705055356848 0.8969739831205675 0.9468522121729861 0.9943936713344266 0.9217493317722554 1.0 13.602727536034356 -8.813701026291147 8.089401579749035 0.997426971044019 0.9596803228581214 0.0 0.04806582645042858 0.3918003219836036 53.77244071233061 0.007733564755694129 0.008233623280085324 1.5356737958873706e-09 8.813701026291147 -0.03774664818589757 KQSFDDNDS(ph)EELEDKDSK ddPTM_A549_MK2206_60min_R1 8 KQSFDDNDSEELEDKDSK 18 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQS(0.339)FDDNDS(0.661)EELEDKDSK;KQS(0.018)FDDNDS(0.982)EELEDKDSK;KQS(0.005)FDDNDS(0.995)EELEDKDSK;KQS(0.004)FDDNDS(0.996)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQS(0.001)FDDNDS(0.998)EELEDKDS(0.001)K;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK 263.25 6.915499999999998e-101 2125078000.0 99919.3 103601.8 103632.3 90822.09999999999 136274.00000000003 97884.1 97579.3 103001.9 144794.9 148072.1 151107.7 True False 116783.23504765717 108874.68910093403 118328.91844721643 113073.51857715902 116228.27512107608 108242.13049179288 115308.19572308203 117602.73475508924 111999.08633994208 114622.50976946007 113583.4877296406 1.0281708845359003 0.9585432819256723 1.0417792305239935 0.995510182310166 1.0232849637240475 0.9529741748152548 1.0151844958093441 1.035385839137248 0.9860507770859279 1.0091476504251446 1.0 16.793393591831705 KQSFDDNDS(ph)EELEDKDSK ddPTM_A549_PD325901_60min_R1 8 KQSFDDNDSEELEDKDSK 18 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQS(0.067)FDDNDS(0.933)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQS(0.001)FDDNDS(0.999)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQS(0.003)FDDNDS(0.997)EELEDKDSK 282.86 1.4644999999999998e-116 3866105300.0 115837.5 118363.59999999999 119645.40000000001 119602.09999999999 137167.0 130388.2 129698.90000000001 136431.9 127130.90000000001 136891.69999999998 139176.7 True False 127597.23772493956 128338.51596909028 127765.25633023775 126989.65008092285 127532.86312046109 129326.36172926982 134634.66261346152 133710.65872574504 121788.03038261378 128248.33469991622 122058.84821379192 1.0453747482644347 1.0514478700003724 1.0467512859571704 1.0403969227900167 1.044847341972957 1.0595410625434423 1.1030307477393402 1.0954605969371791 0.9977812519523059 1.0507090356553515 1.0 16.8972173562946 -8.783270467883458 24.953415167063554 0.9989522449875002 1.060218896905031 0.33552529359040983 0.02498068225803223 104.78696823785312 119773.35650278395 0.0037234098299847307 0.003965591408518152 1.6471362762231495e-09 8.783270467883458 0.06126665191753078 KQSLGELIGTLNAAK ddPTM_A549_MK2206_60min_R1 2 KQSLGELIGTLNAAK 15 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 ; 118.47 7.6538e-07 11948800.0 2998.4 3319.9 3546.3999999999996 2804.5 4709.1 3878.0 3254.6 3625.9 5431.5 4585.200000000001 4536.9 False True 3504.456616158192 3488.868729560592 4049.332846817142 3491.60262589879 4016.397628107052 4288.367385991938 3845.918691775231 4139.882428853039 4201.2739223232065 3549.4001354402976 3410.2625179299716 1.0276207763282095 1.023049900474622 1.187396226984627 1.023851567889909 1.1777385485692766 1.2574889362461679 1.1277485740627682 1.213948312508782 1.231950297149962 1.0407996794319467 1.0 11.73566708512506 -6.764741647000696 24.99067334414691 1.1366358499439047 1.0711572559674214 0.17485470141359005 0.0848790335388279 182.44722854930853 1380731.4999968086 0.015265167817393968 0.029704064551713222 1.718930640123765e-07 6.764741647000696 -0.06547859397648326 KQSLGELIGTLNAAK ddPTM_A549_PD325901_60min_R1 2 KQSLGELIGTLNAAK 15 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 ; 154.82 2.1344999999999996e-19 20901500.0 6990.4 6274.9 7180.799999999999 8025.900000000001 7797.9 7764.2 7472.400000000001 7364.3 8436.7 7701.4 7695.8 False True 7700.060261939504 6803.707844763466 7668.132269658245 8521.6416148586 7250.202405294589 7700.970929412304 7756.76627105418 7217.413259318409 8082.134838414552 7215.13228967085 6749.265387695639 1.1408738313916693 1.0080664270762087 1.1361432436243744 1.2626028353239924 1.0742209690720106 1.1410087597757954 1.1492756360114809 1.0693627890934967 1.1974836332779006 1.0690248308837458 1.0 12.720514767684278 -10.987177321044571 1.235993458320926 0.9993458793339416 1.1357179159392568 0.21645896363303263 0.06648275515093635 0.4036465784836995 1.0884064014444315 0.04676180115928739 0.010504610860907065 1.0299655029663831e-11 10.987177321044571 0.13637203660531516 KQSS(ph)PISPK ddPTM_A549_PD325901_60min_R1 2 KQSSPISPK 9 1 Q9NS62-2;Q9NS62 Q9NS62-2 THSD1 Thrombospondin type-1 domain-containing protein 1 1 KQS(0.398)S(0.592)PIS(0.009)PK;KQS(0.429)S(0.565)PIS(0.006)PK 67.456 0.0020523000000000004 15527900.0 4370.200000000001 4327.0 4462.0 4430.0 5474.0 4914.8 4837.4 4839.299999999999 4904.3 4894.2 5137.2 True False 4813.8594868288 4691.65147560782 4764.818152185705 4703.631038740029 5089.5251242748145 4874.775498296744 5021.489904126849 4742.776365142592 4698.189326162659 4585.179376750604 4505.3569673939055 1.0684746007181194 1.0413495555540133 1.0575894844003633 1.0440085153698295 1.1296607929424107 1.0819953964971896 1.1145598318775387 1.0526971335383488 1.0428006837558748 1.0177172219503112 1.0 12.137425702506988 -9.374575668508038 0.913571072478138 1.0086948114194056 1.074739343393548 0.4678112850412345 0.02668984246264494 0.2996758992420323 0.5310286375637905 0.00810619185087496 0.006081036284618666 4.221087272984618e-10 9.374575668508038 0.06604453197414228 KQSS(ph)SEISLAVER ddPTM_A549_MK2206_60min_R1 1 KQSSSEISLAVER 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KQS(0.434)S(0.46)S(0.105)EIS(0.001)LAVER 72.433 0.00071794 5168000.0 1607.8 1709.9 1533.3 1225.0 2003.8 1342.6 1317.8 1280.8 2250.8 2044.1 2249.2 True False 1879.157333064015 1796.9266064265962 1750.7449960593058 1525.1250549923395 1709.0436744178094 1484.673040854249 1557.2272021205065 1462.3573222854948 1740.9973937890213 1582.3363903108943 1690.661565237958 1.1114923126554463 1.0628541178042819 1.0355384141076698 0.902087730833155 1.0108727314548398 0.8781609941226075 0.9210756511764252 0.8649615939424696 1.0297728590902098 0.9359273451562631 1.0 10.723372176214188 -5.82710281602558 2.615024147607167 0.9809703367371537 1.0959258609715092 0.38055869110314555 0.06100692664981891 0.27943773051554216 3.748823761913607 0.009521057708036632 0.04218392422705242 1.4890085241596946e-06 5.82710281602558 0.11495552423435551 KQSSFILT(ph)PPR ddPTM_A549_PD325901_60min_R1 1 KQSSFILTPPR 11 1 Q8N0S6-3;Q8N0S6;Q8N0S6-2 Q8N0S6-3 CENPL Centromere protein L 1 KQSSFILT(1)PPR 53.403 0.012898 3624000.0 1890.2 2301.3 2613.2 2636.5 2529.7 3039.3 2400.3 2751.4 3476.4 2798.4 2429.5 True False 2082.091712508304 2495.238627413054 2790.5474664481585 2799.3506170740584 2352.022598991231 3014.5489484767045 2491.6447299945576 2696.521168568455 3330.2989975066503 2621.708546422067 2130.686901869403 0.9771927122101034 1.171095868296653 1.3096938193968402 1.3138254215661576 1.1038799726640431 1.4148249307919558 1.16940913646602 1.2655642488826517 1.5630166002263133 1.230452275330484 1.0 11.05710289359356 -5.356858307146242 2.705904828582258 1.2687152856583208 0.9503045924918435 0.2551452431575102 0.1424212144326212 0.5325096855363783 5.78130743225428 0.027613580803628156 0.3386450105546599 4.396850436167537e-06 5.356858307146242 -0.3184106931664773 KQT(ph)PSAGK ddPTM_A549_MK2206_60min_R1 2 KQTPSAGK 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KQT(0.872)PS(0.128)AGK;KQT(0.859)PS(0.141)AGK 57.348 0.010424 18108100.0 4913.700000000001 5075.799999999999 3967.1000000000004 4192.1 6338.9 4112.8 4522.5 5260.5 6701.9 6984.1 7406.7 True False 5743.012431569006 5334.136539505303 4529.694432835633 5219.164688190518 5406.4562070900565 4548.0137661443105 5344.179709811802 6006.191984605596 5183.930350735136 5406.386959331894 5567.411975479274 1.0315407691873955 0.9580998429788574 0.8136086305065815 0.9374489818927444 0.9710896608517351 0.8168990881535747 0.9599037637863589 1.078812204137013 0.931120307526528 0.9710772228000035 1.0 12.442791127878396 -7.9846511757502245 24.999840626246723 0.9770313920894038 0.9184629565983214 0.18499531909964906 0.06864105130101537 374.38314055072175 609785.8072232287 0.010807527779889702 0.014930183801019863 1.0359739242860987e-08 7.9846511757502245 -0.05856843549108237 KQT(ph)PSAGK ddPTM_A549_PD325901_60min_R1 1 KQTPSAGK 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KQT(0.837)PS(0.163)AGK 56.403999999999996 0.011640000000000001 8064800.0 3072.3 3135.6 2967.6 3016.4 3071.0 2664.4 1854.2 2621.5 3013.8 3497.1 3749.3 True False 3384.1976342922803 3399.848016389158 3168.9991816284837 3202.7161772585587 2855.3035543748542 2642.7020097790037 1924.762595657173 2569.212125973035 2887.140466771815 3276.292509181182 3288.159868770919 1.0292071460495196 1.033966763197553 0.9637606771269986 0.9740147392698707 0.8683591030633611 0.803702409629742 0.5853616224495283 0.7813525584245333 0.8780413915370239 0.9963908812030564 1.0 11.683064728534498 -6.417374334411751 1.9704152833529738 0.8869725487098663 1.0193438263746342 0.263058942637706 0.11201506931807953 0.5183516299352308 3.9003101479224522 0.019541395253466456 0.0567860792366462 3.824949147348357e-07 6.417374334411751 0.13237127766476786 KQT(ph)PVPDKK ddPTM_A549_MK2206_60min_R1 2 KQTPVPDKK 9 2 H7C2F6;J3KPF9;A0A087X011;E9PES4;Q9Y496 H7C2F6 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A 1 KQT(1)PVPDKK;KQT(1)PVPDKK 50.354 0.0097803 21904000.0 8834.8 8759.9 8271.8 6313.1 9775.900000000001 8223.8 7493.599999999999 7735.9 10395.5 12104.5 11940.6 True False 10325.898249878068 9205.741493441918 9444.86562212442 7859.809783405824 8337.878060056428 9094.037057483367 8855.090121270476 8832.487515200157 8040.935848202315 9370.085043059646 8975.419476205028 1.1504641401166074 1.025661420933863 1.0523035326832304 0.8757038937559602 0.9289680646304272 1.0132158259112913 0.9865934561327678 0.9840751776132801 0.8958841277023155 1.0439718241471527 1.0 13.13176365112967 -5.389470532998743 1.276207310734054 0.9547882231887785 1.1990190348884404 0.4655041833606772 0.05387806437824844 0.6557366740476988 1.062130493026197 0.007718725502522127 0.19560324588023156 4.078772354161703e-06 5.389470532998743 0.24423081169966188 KQT(ph)PVPDKK ddPTM_A549_PD325901_60min_R1 2 KQTPVPDKK 9 2 H7C2F6;J3KPF9;A0A087X011;E9PES4;Q9Y496 H7C2F6 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A 1 KQT(1)PVPDKK;KQT(1)PVPDKK 59.57 0.0031166999999999996 25976000.0 6457.6 6697.3 6548.1 6120.0 7071.0 6821.9 6032.0 6267.2 6898.2 6737.9 6887.2 True False 7113.170798166134 7261.704975176391 6992.493442924075 6498.018500471552 6574.357353625723 6766.344708193736 6261.55106083705 6142.195779476709 6608.2926431366795 6312.467844102795 6040.118061557914 1.1776542653094184 1.202245535793947 1.1576749612606938 1.075809849119991 1.0884484850499783 1.1202338496093083 1.0366603760096076 1.016899954086736 1.0940668006466445 1.0450901422404706 1.0 12.560361033742158 -2.0000000000104605 0.18208604064588424 1.0132682654081142 1.8405941229296021 0.742667358045074 0.032172892654584236 21.695557389258077 0.22932095717280168 0.03829124149372605 5.039052912770748 0.009999999999759137 2.0000000000104605 0.8273258575214879 KQTDAQSAS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 KQTDAQSASSPK 12 1 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8;F5H4Q7 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 KQT(0.005)DAQS(0.042)AS(0.6)S(0.354)PK 48.70399999999999 0.013696999999999999 2251700.0 610.48 695.5 813.72 530.14 695.25 760.76 584.45 563.06 940.75 931.81 646.66 True False 713.5140991969893 730.8979792793133 929.1177318159386 660.0243237988888 592.9796459921058 841.2631182483825 690.6369997566629 642.8754792989306 727.6716270690521 721.3134738298489 486.0764750919335 1.4679050226860693 1.5036686956328749 1.911464099636196 1.3578610725278484 1.2199307647627944 1.7307217307508478 1.4208402075538424 1.322580935803036 1.4970311552959332 1.4839505937690651 1.0 8.92503950269266 -12.957560875303184 0.25169433904912436 3.258936695749206e-11 1.5600560532206311 0.0 0.23100494149682693 9.564091860172537 0.2997218535399437 5.109672605680533 0.09922068402767076 1.102653663428983e-13 12.957560875303184 1.5600560531880419 KQTDAQSASS(ph)PK ddPTM_A549_MK2206_60min_R1 1 KQTDAQSASSPK 12 1 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8;F5H4Q7 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 KQTDAQSAS(0.141)S(0.858)PK 83.499 0.00023421 2667100.0 626.67 369.34 368.82 409.6 665.05 574.78 635.07 555.76 730.94 888.96 955.28 True False 732.4365753894926 388.13782842131076 421.12422190477633 509.9520183876429 567.2220259864074 635.6028380919148 750.4539985207697 634.5406819436182 565.3832570713287 688.1433185904668 718.0576116132473 1.0200248051739753 0.5405385614523163 0.5864769276084185 0.7101825955746681 0.7899394377451688 0.885169696431345 1.0451166959079201 0.8836904890096589 0.7873786837257976 0.958339982002875 1.0 9.487955789609034 -7.040074734164933 2.487568016245759 0.9072561961324449 0.6929774953774148 0.36334281797453716 0.13044895637111187 0.2570048675472624 3.1605909712809694 0.020420371367255906 0.03968148252995168 9.118539124151843e-08 7.040074734164933 -0.21427870075503008 KQTDFEHR ddPTM_A549_MK2206_60min_R1 1 KQTDFEHR 8 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 69.954 0.0021454 2501800.0 306.72 488.09 318.05 253.31 630.01 353.47 421.56 486.77 553.22 646.9 613.73 False True 358.48683741596875 512.9316961990513 363.1542724820076 315.3709613715179 537.3363635692002 390.8739607856035 498.15199523897456 555.771138170604 427.91655331080597 500.7648407084378 461.3239029136989 0.777082728971518 1.111868890728185 0.7872002083315937 0.6836215495872869 1.16477026266233 0.84728746617477 1.079831311780446 1.2047308510579684 0.9275837445406714 1.0854951099338923 1.0 8.849636235531106 -6.761886490211956 24.999999778189842 0.9945810816106373 0.8555992607877668 0.28481562724600873 0.14173198077109073 15.7304021497228 879643.8934850929 0.01955767543464689 0.038643460904158315 1.730268533392882e-07 6.761886490211956 -0.13898182082287047 KQTDFEHR ddPTM_A549_PD325901_60min_R1 4 KQTDFEHR 8 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 ;;; 64.711 0.0029211 8926100.0 1413.28 1541.4 986.605 1057.68 1544.31 1669.62 1352.62 1440.35 1277.33 1499.29 1445.9799999999998 False True 1556.7551451982529 1671.2991875437713 1053.5619482378252 1123.0104914344358 1435.842993180277 1656.0231682807469 1404.0946942820653 1411.6210893172831 1223.6482621347277 1404.6245735295686 1268.1336268224395 1.2275955090781812 1.3179204085389196 0.8307972645420134 0.8855616377339993 1.1322489703061236 1.3058743441968663 1.1072135180267266 1.1131485353435346 0.9649206016252572 1.1076313598347947 1.0 10.308491059001138 -8.756780221124155 24.496364150875273 0.9834347260405945 1.111356572358171 0.05104840896085161 0.14777532376038638 139.49761987688646 733431.4369114724 0.025620140875024757 0.028578789771986277 1.7507324393781202e-09 8.756780221124155 0.12792184631757664 KQTETEMLYGS(ph)APRTPSK ddPTM_A549_MK2206_60min_R1 1 KQTETEMLYGSAPRTPSK 18 2 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 KQTETEMLY(0.001)GS(0.842)APRT(0.15)PS(0.007)K 61.703 0.00062174 5326100.0 1617.5 1873.2 1985.7 2354.4 2132.9 1404.1 1901.1 1483.1 2285.5 2905.6 3277.6 True False 1890.4944559217827 1968.537878915902 2267.302118747124 2931.2281056930337 1819.153235435545 1552.6809300338527 2246.505261763011 1693.3339668032602 1767.8378991935353 2249.222941973159 2463.681462841867 0.7673453262667688 0.799022888553614 0.9202902862822946 1.1897756061012246 0.7383881653828511 0.6302279549738661 0.9118489121445341 0.6873185484173723 0.7175594434007417 0.9129520093797641 1.0 11.266600022153684 -5.540037451732866 21.80516577470145 0.8552660111929071 0.7752645720241552 0.034868943442707745 0.15229659255550274 153.83571532180343 195495.5431408258 0.022967855312005833 0.08904631934363985 2.8837828070809105e-06 5.540037451732866 -0.08000143916875191 KQTETEMLYGSAPRT(ph)PSK ddPTM_A549_MK2206_60min_R1 1 KQTETEMLYGSAPRTPSK 18 2 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 KQTETEMLY(0.001)GS(0.002)APRT(0.968)PS(0.029)K 69.27 0.00049568 6861500.0 1849.1 2078.5 2276.6 2189.2 2178.2 1648.3 1753.2 1441.4 2614.2 2970.7 3200.9 True False 2161.1828738454215 2184.286772008702 2599.4561129776393 2725.554098276923 1857.789665444093 1822.7220119470107 2071.7337462116193 1645.722864102368 2022.0878740195756 2299.6168067592466 2406.0281896541783 0.8982367218881385 0.9078392270718376 1.0803930411768212 1.1328022298311768 0.7721396089341396 0.7575646951206307 0.861059631437399 0.6839998264271833 0.8404256785994735 0.9557730107433918 1.0 11.2324378302667 -6.768084341323145 24.999895419504412 0.8779726544726081 1.0032889959201112 0.3156955726180847 0.10822072519111706 208.55173284825187 784623.7274446482 0.018385937374473044 0.0353209015673592 1.7057510947299352e-07 6.768084341323145 0.12531634144750314 KQTETEMLYGSAPRT(ph)PSK ddPTM_A549_PD325901_60min_R1 4 KQTETEMLYGSAPRTPSK 18 2 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 KQTETEMLYGS(0.061)APRT(0.936)PS(0.003)K;KQT(0.001)ET(0.002)EMLY(0.241)GS(0.318)APRT(0.408)PS(0.03)K;KQTETEMLY(0.001)GS(0.215)APRT(0.777)PS(0.007)K;KQTETEMLY(0.011)GS(0.123)APRT(0.855)PS(0.012)K 88.836 3.4173000000000003e-06 69312000.0 12581.8 11843.800000000001 11255.8 11446.3 16547.8 16217.7 12640.800000000001 13007.2 20446.0 12748.8 15638.000000000002 True False 13859.095073768372 12841.918591819718 12019.686274623906 12153.311954566583 15385.53961481087 16085.628428161306 13121.85256131117 12747.761192048994 19586.725722880255 11943.838592276175 13714.625137449559 1.0105340054774314 0.9363667226130153 0.8764137666295083 0.8861570646492111 1.1218344986184612 1.1728813778684637 0.9567780693823161 0.9295012487975033 1.4281634041455618 0.8708833433341155 1.0 13.743427569017193 -7.382525015770571 0.8072835970843666 1.1816415359735668 0.9280090054542771 0.0 0.16910362644848764 0.701676798052636 0.9048308453763181 0.034985140326590385 0.0821091905262987 4.1445271048449836e-08 7.382525015770571 -0.2536325305192897 KQTPS(ph)AGK ddPTM_A549_PD325901_60min_R1 1 KQTPSAGK 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KQT(0.474)PS(0.526)AGK 53.166000000000004 0.010709 12833000.0 3152.5 3405.9 2727.4 3090.8 3336.7 2256.1 2232.5 2562.0 2812.8 3601.3 3975.9 True False 3472.539479252162 3692.9271460070895 2912.4977651885447 3281.711696283901 3102.341702990093 2237.727069607571 2317.459009170874 2510.8989001498812 2694.5877977754853 3373.9133033982985 3486.889505306671 0.9958845767746097 1.0590892370942215 0.8352710232876712 0.9411573527894959 0.8897160917398336 0.6417545110626509 0.6646207187362694 0.7200970654012876 0.7727769387801399 0.9675997183918691 1.0 11.76772493249571 -5.765210388432666 24.980840462194163 0.8474196748356493 1.0274869344490472 0.29643611429391836 0.11597059220117897 103.66810538525479 686767.2308503935 0.019135053359578776 0.06298737568555965 1.7170763698568384e-06 5.765210388432666 0.18006725961339787 KQVSS(ph)PCAQR ddPTM_A549_PD325901_60min_R1 1 KQVSSPCAQR 10 1 Q6NSI8-3;Q6NSI8-2;Q6NSI8 Q6NSI8-3 KIAA1841 Uncharacterized protein KIAA1841 1 KQVS(0.101)S(0.899)PCAQR 58.781000000000006 0.0043952 17394000.0 1801.1 2030.3 1449.4 1435.7 1413.4 1883.2 1843.8 1688.3 1488.4 1502.4 2302.4 True False 1983.9463461002592 2201.4005063384707 1547.7649999502378 1524.3799282887264 1314.1276599652952 1867.8638435729692 1913.966817966074 1654.6255320542725 1425.8477240504242 1407.5382075988123 2019.2193961161208 0.9825313435064522 1.0902235341898792 0.7665165077788453 0.754935264202 0.6508097448414776 0.9250425422644626 0.9478746200871012 0.8194382122303656 0.7061380882102158 0.6970704670855231 1.0 10.979581958329211 -5.757945437246613 24.999930445211323 0.8400406090808652 1.0363774759733213 0.35654331854191534 0.1117998233691784 90.74467187405335 649266.936296726 0.01790444064418531 0.06416500401406135 1.7460415037334304e-06 5.757945437246613 0.1963368668924561 KQYQDS(ph)PNQK ddPTM_A549_MK2206_60min_R1 1 KQYQDSPNQK 10 1 H0Y9T5;Q8IU60 H0Y9T5 DCP2 m7GpppN-mRNA hydrolase 1 KQY(0.014)QDS(0.986)PNQK 51.211000000000006 0.010719 7023100.0 1397.2 793.68 896.61 815.49 1281.1 790.91 893.18 925.35 1342.4 1432.2 1743.0 True False 1633.0132017396695 834.0749219186274 1023.7627802235273 1015.2850866087368 1092.651887062908 874.6035712364323 1055.4592444908133 1056.5211962655226 1038.3485433723038 1108.6650252939016 1310.1649956472345 1.2464179757244582 0.6366182310546208 0.7813998875139985 0.7749291806618417 0.8339803694137982 0.6675522351323159 0.8055926146686632 0.8064031627891193 0.7925326556746766 0.8462025996551756 1.0 10.35553279368643 -10.636113993676387 0.8023442567852922 1.0064621691163673 0.8034590529235276 0.027371864597310225 0.1556437429061898 0.8589016139839349 0.9371665760210244 0.1081203838056062 0.025744146678029843 2.3114579987247436e-11 10.636113993676387 -0.20300311619283973 KQYQDS(ph)PNQK ddPTM_A549_PD325901_60min_R1 1 KQYQDSPNQK 10 1 H0Y9T5;Q8IU60 H0Y9T5 DCP2 m7GpppN-mRNA hydrolase 1 KQYQDS(1)PNQK 71.241 0.0011385 12229000.0 2363.2 2198.2 2430.1 1882.4 2599.3 2464.4 2417.9 2444.8 2631.8 2307.6 2835.0 True False 2603.1103243041102 2383.450028583571 2595.021199378414 1998.6715727594183 2416.7341350981965 2444.330743469216 2509.9145076256495 2396.0365460915023 2521.1945983310306 2161.897742182519 2486.3129725456915 1.0469761261144979 0.9586283202887362 1.0437226640544044 0.8038696635657313 0.9720152538253242 0.983114664348354 1.009492584135855 0.9636906425494145 1.0140294589500631 0.8695195520654788 1.0 11.279792196305866 -7.45492224230539 3.108902615755392 1.0029867083558826 0.9605107217342008 0.0 0.07299456543896152 0.48519725470884617 9.205686890474931 0.008937120215187761 0.014509827550279204 3.5081467949113555e-08 7.45492224230539 -0.04247598662168173 KRAPS(ph)PLPK ddPTM_A549_MK2206_60min_R1 3 KRAPSPLPK 9 2 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 KRAPS(1)PLPK;KRAPS(1)PLPK;KRAPS(1)PLPK 73.781 0.00045296 33531100.0 5706.9 7411.200000000001 7058.200000000001 6623.599999999999 9118.0 6450.6 6391.3 6020.4 9348.2 9335.6 9585.9 True False 6670.085199690893 7788.398424205386 8059.158893357988 8246.382297344704 7776.75427854156 7133.198210438266 7552.516479672786 6873.810136701742 7230.847626007876 7226.681476144211 7205.456472618945 0.9256991871420657 1.0809028482514114 1.1184799913764174 1.1444635504608658 1.0792868304865308 0.9899717301110258 1.0481662762619808 0.9539728902426274 1.003523878533639 1.0029456847884548 1.0 12.814874114079917 -7.257247685189402 24.127510938007866 1.0008729509733414 1.077241316809335 0.2791633848915256 0.05540697563464917 211.38332238111082 1216724.3297205367 0.007931839277936718 0.013424902235260924 5.530346146448043e-08 7.257247685189402 0.07636836583599371 KRAPS(ph)PLPK ddPTM_A549_PD325901_60min_R1 2 KRAPSPLPK 9 2 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 KRAPS(1)PLPK;KRAPS(1)PLPK 57.836000000000006 0.0041535 16782700.0 6011.1 6282.1 6728.5 5710.0 7971.5 8258.5 7832.9 7390.799999999999 8121.6 7619.0 7987.7 True False 6621.342446862068 6811.514614031866 7185.136471757395 6062.693731649109 7411.609340182074 8191.245514096947 8130.985295827341 7243.384696029559 7780.277395624787 7137.93503973333 7005.26353820219 0.9451953392978774 0.9723423789677943 1.0256768260857416 0.8654483444608596 1.0580057837601593 1.1692986951064976 1.1606965607341095 1.0339917487084975 1.1106330765710912 1.0189388308958878 1.0 12.774223610565237 -6.917814812813169 11.19797201569796 1.0701014955221895 0.9589708252189921 0.48880146216700526 0.06185881213053182 0.39413540409085535 51.486014693063645 0.00996694691961892 0.018845233038119035 1.2083289679262625e-07 6.917814812813169 -0.11113067030319734 KRAS(ph)FYENIIK ddPTM_A549_PD325901_60min_R1 1 KRASFYENIIK 11 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KRAS(0.979)FY(0.021)ENIIK 50.675 0.0053504 2073500.0 1052.5 1361.5 1223.0 1493.7 1387.6 1405.1 1195.6 1446.6 1426.2 1412.0 1705.6 True False 1159.3490251904516 1476.238383184666 1306.0001344964405 1585.9624565611678 1290.1397629601263 1393.657331459421 1241.099212257424 1417.746428164253 1366.261773744099 1322.8460790265729 1495.8220126892165 0.7750581388397624 0.9869077809134906 0.8730986196335547 1.0602614770388992 0.8624955054917858 0.9316999747542677 0.8297104880988834 0.9478042281350053 0.9133852571722809 0.884360617643496 1.0 10.546722804348088 -10.5781334984019 0.6783956404437428 1.0060308282035113 0.9116624069114164 0.0 0.08056479742940136 1.1726044233775166 0.873994082122579 0.0625530340751085 0.01363233260234445 2.64159662834212e-11 10.5781334984019 -0.09436842129209488 KRAS(ph)LSEK ddPTM_A549_PD325901_60min_R1 1 KRASLSEK 8 2 Q6UB99;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 KRAS(0.998)LS(0.002)EK 56.093999999999994 0.006401100000000001 3447500.0 2023.4 2125.7 2104.2 2530.9 2852.4 2314.6 1849.1 1995.4 2210.1 2724.9 2579.8 True False 2228.8140784516477 2304.8401991447995 2247.0036655825093 2687.227944909059 2652.057264245796 2295.7506650031833 1919.468512366345 1955.6001816389823 2117.2171828297783 2552.849348965658 2262.5009546996034 0.9851107792118353 1.0187134703113605 0.9931503723413228 1.187724557343158 1.1721795116757927 1.014695998352847 0.8483835148795315 0.8643533067143528 0.9357862052751643 1.1283307278447556 1.0 11.143702685627032 -7.524671890646278 24.999483288923255 0.9502129305658721 1.0728550031481563 0.266515947081441 0.0915510251962324 52.24184596882018 728336.5245198584 0.012630854288494454 0.018809620429359592 2.987638926823753e-08 7.524671890646278 0.12264207258228421 KRCS(ph)DNTEVEVSNLENK ddPTM_A549_PD325901_60min_R1 1 KRCSDNTEVEVSNLENK 17 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 KRCS(0.842)DNT(0.158)EVEVSNLENK 92.492 9.7356e-07 8210600.0 1841.9 1685.6 1793.8 1581.2 1799.0 2212.7 1785.1 1649.7 1518.9 1866.1 1810.1 True False 2028.8883320648865 1827.6514276137143 1915.5380549956774 1678.86713283425 1672.6444462130785 2194.6805048183464 1853.0329573442007 1616.7954393353853 1455.0659151170314 1748.2741275293822 1587.469175169297 1.2780647106728948 1.1512988448539814 1.2066615748878358 1.0575746345784673 1.0536547558693214 1.3825027529018274 1.1672875204941113 1.0184735959757838 0.9165947521228907 1.1012964250741664 1.0 10.632512863153412 -8.33970402351141 3.611050171748603 0.9611397304210532 1.1829849355761075 0.4060931621443318 0.0983990975401779 0.13368064205960328 3.3758625121547063 0.015151934378289688 0.01861957094018908 4.5739980644024556e-09 8.33970402351141 0.22184520515505435 KRDEDRHDINK ddPTM_A549_MK2206_60min_R1 2 KRDEDRHDINK 11 3 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 ; 45.879 0.011452 10611400.0 2342.47 2020.51 2441.9 1024.32 1041.17 761.3199999999999 874.19 732.96 1101.9 2447.7 2617.5 False True 2737.821668107018 2123.3453287040193 2788.198138575112 1275.2784459834718 888.0152722295585 841.882377076684 1033.0190073013555 836.8593245958584 852.3214093727223 1894.7628699985203 1967.5025106750636 1.3915213084875062 1.0792084468423295 1.417125581008007 0.6481711911747015 0.45134136673852293 0.42789392771236073 0.5250407568460584 0.4253409182734543 0.43319965527275744 0.9630294547113001 1.0 10.942149761378916 -6.2700608523291415 23.947489366228833 0.6439388223776235 1.2742774471417915 0.6746140705011766 0.21125640547425872 198.03730663867145 550080.8703250926 0.036809922731077735 0.08688427251816425 5.369565539999175e-07 6.2700608523291415 0.630338624764168 KRDEDRHDINK ddPTM_A549_PD325901_60min_R1 2 KRDEDRHDINK 11 3 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 ; 71.085 0.00076543 42439000.0 1424.3 1628.95 1861.5900000000001 1992.45 2539.0 2913.5 1991.24 1923.2199999999998 2365.06 2414.0 2405.5 False True 1568.8938874857574 1766.2273333005214 1987.9286920500651 2115.5191113177348 2360.669399074489 2889.773421967847 2067.0177278483375 1884.8598683630971 2265.664752917694 2261.579628024184 2109.638749720867 0.7436789297188169 0.837217904503421 0.942307630779485 1.0027873784540817 1.1189922442346285 1.3697953843283368 0.9797970046396953 0.8934514824457452 1.0739586354381627 1.0720222257594674 1.0 11.042780260558496 -5.809213724671869 1.5999454239956927 1.05018972077902 0.7451897178476506 0.47149575978226255 0.11363347504054716 0.342938360655011 1.4972428244472775 0.0170308695824081 0.11772655583414998 1.5516232383859579e-06 5.809213724671869 -0.3050000029313694 KRDFTNEAPPAPLPDASAS(ph)PLSPHRR ddPTM_A549_MK2206_60min_R1 1 KRDFTNEAPPAPLPDASASPLSPHRR 26 3 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 KRDFTNEAPPAPLPDAS(0.036)AS(0.482)PLS(0.482)PHRR 64.70100000000001 6.5077e-05 6773100.0 233.8 674.18 784.84 605.39 920.68 559.12 690.81 637.97 1039.2 1061.8 1081.8 True False 273.2597241388024 708.4928823443955 896.1421135506332 753.7105771769894 785.2491916174214 618.2857072861815 816.3212350105225 728.4042012011846 803.8228592613964 821.938642547873 813.1592038388856 0.3360470161916097 0.8712843425981464 1.1020500159378253 0.9268917742291521 0.9656770628805499 0.7603501311517896 1.0038885757631582 0.8957707147166549 0.9885184296833723 1.0107967033608427 1.0 9.66739402682688 -5.2788242490842485 3.5995930465460075 0.9722706708805613 0.2746387948807194 0.825734461454733 0.08205635313194785 0.07042985989667461 1.6429450905408616 0.010775795452491275 0.1283940008695784 5.2623017889280785e-06 5.2788242490842485 -0.6976318759998419 down KRDFTNEAPPAPLPDASAS(ph)PLSPHRR ddPTM_A549_PD325901_60min_R1 1 KRDFTNEAPPAPLPDASASPLSPHRR 26 3 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 KRDFTNEAPPAPLPDAS(0.133)AS(0.526)PLS(0.341)PHRR 73.317 1.5866999999999998e-06 11279000.0 750.32 421.8 475.1 706.94 725.53 615.99 600.17 789.92 794.54 760.1 625.53 True False 826.4919340436102 457.3465663072286 507.3431430083879 750.6060782227707 674.5712757426202 610.9735816708334 623.0097977756258 774.1644259197475 761.1482468872781 712.1071562805224 548.5937755613776 1.506564548964958 0.833670717169958 0.9248065975397228 1.3682365926494033 1.2296371300464164 1.113708556108976 1.135648681281697 1.4111797479428978 1.3874533047852993 1.2980591249906566 1.0 9.099594442989575 -6.256028538758429 24.905975534390517 1.2078493875264544 1.0628796477710398 0.08512682818919981 0.19855646930687268 892.7207315350199 4109151.86236355 0.02979723312996374 0.07636564000910635 5.545892680804175e-07 6.256028538758429 -0.1449697397554146 KRDFTNEAPPAPLPDASASPLS(ph)PHRR ddPTM_A549_MK2206_60min_R1 1 KRDFTNEAPPAPLPDASASPLSPHRR 26 3 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 KRDFTNEAPPAPLPDAS(0.001)AS(0.012)PLS(0.987)PHRR 98.94 3.715e-10 6062300.0 691.9 705.74 435.0 600.49 901.01 602.22 594.99 514.56 1078.6 886.22 658.08 True False 808.6758046691082 741.6591515407366 496.68954104597816 747.6100769570205 768.4726225607295 665.9465206787174 703.0919813246933 587.5004557739096 834.298822170267 686.0222864934789 494.6605739159678 1.6348094982934396 1.4993294203122172 1.0041017360933946 1.5113597411626813 1.553535218052928 1.3462696559921257 1.4213624824769913 1.1876840135509026 1.686608689197851 1.3868545881120078 1.0 8.950295106286402 -11.041078669859031 1.3335982287019643 0.9995642499927505 1.4450789868638425 0.05017632370836578 0.21710728460587136 0.3501425108526628 1.1082492508385047 0.14006661635723752 0.031210466768367782 9.097484621894112e-12 11.041078669859031 0.445514736871092 KRDFTNEAPPAPLPDASASPLS(ph)PHRR ddPTM_A549_PD325901_60min_R1 1 KRDFTNEAPPAPLPDASASPLSPHRR 26 3 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 KRDFTNEAPPAPLPDAS(0.012)AS(0.223)PLS(0.765)PHRR 103.73 8.9838e-13 11510000.0 688.69 522.18 581.97 927.64 727.59 1072.6 818.76 786.24 740.37 963.08 783.05 True False 758.605301813218 566.1859411908691 621.4659838699042 984.9382159767043 676.4865884492347 1063.8651012193961 849.918359842663 770.5578264066517 709.2548236060288 902.2709644397385 686.7398141629285 1.1046473295536052 0.8244548073581502 0.9049511489695891 1.4342232613631871 0.9850697083491634 1.5491530842960488 1.2376133468810657 1.1220520647195757 1.0327853562277354 1.3138468832472197 1.0 9.4236197969461 -3.96573052240549 12.696049962711648 1.075502177754843 1.087031529744234 0.0 0.22298518734878214 0.0 0.0 0.02768285859631842 0.0 0.00010821051839838133 3.96573052240549 0.011529351989390868 KRDHANYEEDENGDIT(ph)PIK ddPTM_A549_MK2206_60min_R1 2 KRDHANYEEDENGDITPIK 19 2 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 KRDHANYEEDENGDIT(1)PIK;KRDHANYEEDENGDIT(1)PIK 146.39 3.2901000000000002e-21 31534000.0 3358.0 4230.3 4083.1000000000004 3463.2 5536.299999999999 4979.9 4289.7 4169.6 6994.1 6814.8 7587.3 True False 3924.7483047822852 4445.604200927789 4662.144977114563 4311.684155468956 4721.917603892264 5506.869712609915 5069.082963223811 4760.653568864459 5409.947517282651 5275.3319469158505 5703.164011172838 0.6881703379200509 0.7794978703433015 0.8174664042593098 0.7560161599810403 0.8279470123324081 0.9655815091099658 0.888819426075276 0.83473902548446 0.9485870486425151 0.9249833840621032 1.0 12.477546806884586 -2.681984705691934 0.14596441609024646 1.043564297159001 1.6361546876883863e-13 0.7047960997348524 0.05019114104337286 16.168985687244604 0.17799798312291434 0.09274225892885178 3.4542324421303117 0.0020797699279189075 2.681984705691934 -1.0435642971588373 KRDHANYEEDENGDIT(ph)PIK ddPTM_A549_PD325901_60min_R1 2 KRDHANYEEDENGDITPIK 19 2 H3BSB3;H3BNT4;Q99547 H3BSB3 MPHOSPH6 M-phase phosphoprotein 6 1 KRDHANYEEDENGDIT(1)PIK;KRDHANYEEDENGDIT(1)PIK 122.3 9.2737e-15 62519000.0 6149.200000000001 6327.0 6170.299999999999 7962.6 7932.4 7566.1 6206.5 8540.3 8781.6 8921.6 9741.599999999999 True False 6773.462257198221 6860.198494608435 6589.053663028116 8454.431717623322 7375.255589294396 7504.484190132464 6442.691753827114 8369.957016764261 8412.539890836613 8358.288653430222 8543.444957090334 0.7928256448327465 0.8029780175402257 0.7712408397457703 0.9895811069288696 0.8632648336048048 0.8783908865596868 0.7541093535670557 0.9796934443661286 0.9846777187760681 0.9783276764127276 1.0 13.060602207007761 -8.363194920413966 7.32906231562492 0.9920911267662339 0.8410319018680016 0.5833094108027537 0.060698402479670226 0.1411891370859685 8.990753447607025 0.009919946785786345 0.011996972245422321 4.333163533278669e-09 8.363194920413966 -0.1510592248982323 KRDHS(ph)NNDREVPPDLTK ddPTM_A549_PD325901_60min_R1 1 KRDHSNNDREVPPDLTK 17 3 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 KRDHS(1)NNDREVPPDLTK 104.86 2.1794e-09 14768000.0 2229.5 2371.7 2723.1 2578.5 2546.6 2651.9 1902.1 1982.2 2304.2 2344.8 2835.8 True False 2455.837198728846 2571.5714824818747 2907.905941330543 2737.768088801617 2367.7356012930645 2630.303805634642 1974.485456369059 1942.6634659941833 2207.362487071343 2196.748927833928 2487.0145776173094 0.9874639339998027 1.0339993603678734 1.1692355836999033 1.1008251071147892 0.9520392934574109 1.0576149530070753 0.7939179263921805 0.7811226695162184 0.8875551060042889 0.8832875157243867 1.0 11.280199248587861 -7.181133802734603 1.7988657400760986 0.9230003940271514 1.0716460483729207 0.4504613235254883 0.08687091616331448 0.32432617648382533 2.048677213876988 0.015075176653235725 0.02926776384640457 6.589708402019944e-08 7.181133802734603 0.14864565434576926 KRDS(ph)EEEFGSER ddPTM_A549_MK2206_60min_R1 2 KRDSEEEFGSER 12 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KRDS(1)EEEFGSER;KRDS(1)EEEFGSER 119.4 5.7232000000000005e-06 58737000.0 3694.3999999999996 4239.7 4100.0 4379.4 5767.6 4582.1 4613.9 4577.2 6481.3 5806.8 6434.799999999999 True False 4317.924400591921 4455.482620777145 4681.441651237958 5452.353196598739 4919.193680293519 5066.974780648188 5452.18590671104 5226.032117087105 5013.295898509322 4495.039847002253 4836.86156855469 0.8927120074437371 0.921151568559051 0.9678676110296095 1.12725020539051 1.0170218044432127 1.0475749013760298 1.1272156189370157 1.0804593108602658 1.036477026984122 0.9293298522796927 1.0 12.239855532965286 -5.971121004480262 4.063697139790727 1.038359021289862 0.910023250063193 0.5007833514896135 0.0541131898751925 0.12187433010524444 4.511351081365159 0.006735325111047651 0.02192564575933371 1.0687570573168039e-06 5.971121004480262 -0.12833577122666895 KRDS(ph)EEEFGSER ddPTM_A549_PD325901_60min_R1 2 KRDSEEEFGSER 12 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KRDS(1)EEEFGSER;KRDS(1)EEEFGSER 132.4 1.9187000000000002e-08 76359000.0 9611.3 9838.099999999999 10573.4 9990.7 11312.7 11666.4 9006.400000000001 9924.5 11006.5 11113.900000000001 10688.400000000001 True False 10587.032100534901 10667.191213814946 11290.97450701934 10607.80284847404 10518.134978696327 11571.392706382594 9349.14348049119 9726.548061880363 10543.935081134772 10412.166457289955 9373.794559350046 1.129428646371889 1.13798005133095 1.2045254923745872 1.1316444777310712 1.1220786749806502 1.234440613469656 0.9973702134495503 1.0376318789895451 1.1248310398074117 1.1107739124604739 1.0 13.194417461017881 -7.768042637823359 24.999994453600547 1.0543090216138682 1.158023754137114 0.5418292354660241 0.04846797206518241 109.02456044395447 412768.09744796244 0.008690483227809003 0.012159556046745469 1.7059148988051084e-08 7.768042637823359 0.1037147325232457 KRDS(ph)EEEFGSERDEYR ddPTM_A549_MK2206_60min_R1 2 KRDSEEEFGSERDEYR 16 3 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KRDS(1)EEEFGSERDEYR;KRDS(1)EEEFGSERDEYR 184.26 1.3736000000000001e-34 79232000.0 3894.3999999999996 3594.3 3448.5 3658.5 5764.700000000001 4599.3 4659.5 4217.9 6690.7 4827.5 5265.0 True False 4551.679511061385 3777.2345175034293 3937.5491547058746 4554.832664236308 4916.720266451912 5085.994873231749 5506.070836455079 4815.800241777006 5175.267132852412 3736.9643971556393 3957.5551933922466 1.1501240762633256 0.9544363459062073 0.9949448491028564 1.1509208189544164 1.242363031262619 1.2851355507874174 1.3912808709903326 1.2168624331045925 1.3076929770918482 0.9442608414899891 1.0 11.950393755473824 -6.378999212490521 4.583652823506103 1.189367458822106 1.0261032055829282 0.23282905838912926 0.1297668105677609 0.28592181568105407 9.491675868344617 0.020439045101019113 0.048961803309446494 4.17831124302283e-07 6.378999212490521 -0.1632642532391777 KRDS(ph)EEEFGSERDEYR ddPTM_A549_PD325901_60min_R1 2 KRDSEEEFGSERDEYR 16 3 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KRDS(1)EEEFGSERDEYR;KRDS(1)EEEFGSERDEYR 212.39 9.1488e-47 106406000.0 7095.5 5987.7 6746.1 6694.9 8129.9 8029.799999999999 6312.4 7222.0 9361.8 7969.0 9110.7 True False 7815.829936568981 6492.304492834976 7203.930913594794 7108.428767778917 7558.8838706324095 7964.4079710717 6552.621836277816 7077.951544450603 8968.356102536454 7465.835980001954 7990.1416574857285 0.9781841513719046 0.8125393480042407 0.90160240236112 0.8896499051577189 0.9460262651977783 0.996779320377891 0.8200883184766641 0.885835551841497 1.1224276723722746 0.9343809284041207 1.0 12.964005365630173 -8.750259097337652 24.999923802977943 1.0578130680026159 0.9019600278163512 0.30832231130944976 0.07045711909672696 120.7563044025782 270019.82607207366 0.011319236714141652 0.012777013752041967 1.77721881620742e-09 8.750259097337652 -0.15585304018626467 KRDS(ph)KTDSTES(ph)SGTQSPK ddPTM_A549_MK2206_60min_R1 1 KRDSKTDSTESSGTQSPK 18 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 2 KRDS(0.793)KT(0.158)DS(0.063)T(0.062)ES(0.241)S(0.227)GT(0.202)QS(0.255)PK 41.482 0.029394999999999998 4491100.0 281.03 327.79 424.44 237.43 471.51 522.6 469.8 354.27 611.53 520.24 740.88 True False 328.4609934761662 344.47311089570974 484.6319742564484 295.60036065863767 402.1515036055201 577.901185126196 555.1565788103009 404.4888574063726 473.01943141274194 402.717422677628 556.8990487522219 0.5898034737392891 0.6185557538076786 0.8702330796619354 0.5307970292299018 0.722126397067069 1.037712645444504 0.9968711206351938 0.7263234841443222 0.8493809290437483 0.7231425939404089 1.0 9.121272018122301 -7.1033410755703645 5.784698867558172 0.9223607250723369 0.6610239354775541 0.4276386452735237 0.12658464341187484 0.13904381471678356 6.509917407199388 0.017194437509835778 0.03011208164715031 7.882408251817925e-08 7.1033410755703645 -0.2613367895947828 KRDS(ph)KTDSTESSGTQS(ph)PK ddPTM_A549_PD325901_60min_R1 1 KRDSKTDSTESSGTQSPK 18 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 2 KRDS(0.671)KT(0.179)DS(0.068)T(0.081)ES(0.001)S(0.001)GTQS(1)PK 115.88 1.7549000000000003e-10 6505900.0 583.66 689.28 580.49 855.91 979.9 665.38 752.35 839.65 548.23 969.98 950.14 True False 642.9127335322178 747.3680446283701 619.8855421699415 908.7776167873535 911.0752044714815 659.9613658860362 780.9810909517166 822.9025220573178 525.18979962118 908.7352972621782 833.2788034337087 0.7715457670145386 0.8969003430168576 0.743911329096056 1.0906045048098372 1.093361790456202 0.79200546463743 0.9372386381766968 0.9875476475176937 0.6302690017518984 1.0905537180563507 1.0 9.702655471720531 KRDS(ph)KTDSTESSGTQSPK ddPTM_A549_PD325901_60min_R1 2 KRDSKTDSTESSGTQSPK 18 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KRDS(0.807)KT(0.17)DS(0.008)T(0.008)ES(0.002)S(0.002)GT(0.001)QSPK;KRDS(0.93)KT(0.01)DS(0.012)T(0.012)ES(0.012)S(0.012)GT(0.014)QSPK 82.50399999999999 5.5843e-05 13996400.0 823.56 700.31 903.9599999999999 1063.54 822.8 1068.43 947.69 949.88 1144.15 1258.1 1118.0700000000002 True False 907.1672049271717 759.3275814381589 965.3081615530681 1129.23245032541 765.0093665059038 1059.729060316838 983.7548615458662 930.9338982335552 1096.0653543888018 1178.6633512913113 980.5544780296864 0.9251573729488461 0.7743859198562246 0.9844513315494168 1.1516264273194439 0.7801803812503144 1.0807447052266224 1.0032638507985916 0.9493953870917624 1.11780158976095 1.2020375998483046 1.0 9.937453976234897 -5.51822350392165 0.45941995792955514 1.0475990172033403 0.7508620021265833 0.23871927744694965 0.11519967333637483 3.9084812880382263 0.6325520433576013 0.022509410660484726 0.5990720920118587 3.0323302338447943e-06 5.51822350392165 -0.296737015076757 KRDS(ph)QGTYSSR ddPTM_A549_MK2206_60min_R1 5 KRDSQGTYSSR 11 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KRDS(0.95)QGT(0.044)Y(0.004)S(0.001)S(0.001)R;KRDS(0.995)QGT(0.005)YSSR;KRDS(1)QGTYSSR;KRDS(0.992)QGT(0.007)YS(0.001)SR;KRDS(0.994)QGT(0.005)Y(0.001)SSR 102.5 4.7099e-05 734514400.0 7356.51 8590.1 7957.34 7223.0 10386.64 7940.25 7544.02 8198.78 10214.19 10261.08 11092.289999999999 True False 8598.10903859855 9027.299398716359 9085.810465624842 8992.635324252788 8858.779015098806 8780.48198468863 8914.670782623421 9360.982172710697 7900.692273709745 7943.094901370443 8337.768261369976 1.0312242759773942 1.082699724402401 1.0897173177288517 1.0785422480397902 1.0624880348549317 1.053097388826433 1.0691914794425643 1.1227203586457795 0.9475787796015794 0.952664388403776 1.0 13.02544555932477 -8.769190142290226 24.99988550482194 0.9752455312517039 1.0734926238833797 0.7788254011828116 0.0252752420575113 63.56910697597702 205039.92946234447 0.004755998711551115 0.0051091287201241046 1.7014134345098317e-09 8.769190142290226 0.09824709263167586 KRDS(ph)QGTYSSR ddPTM_A549_PD325901_60min_R1 3 KRDSQGTYSSR 11 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KRDS(0.999)QGT(0.001)YSSR;KRDS(0.652)QGT(0.238)Y(0.008)S(0.051)S(0.051)R;KRDS(1)QGTYSSR 140.31 4.813999999999999e-10 652970000.0 3567.21 3919.88 3495.17 3153.67 3843.4799999999996 3965.4 3295.88 3510.21 4034.2599999999998 3660.32 4340.1 True False 3929.3505331587926 4250.222044420058 3732.3732543646147 3348.4650333957716 3573.527224086181 3933.10709712418 3421.30651697474 3440.1961078435256 3864.7140817170543 3429.2067705258796 3806.295214160691 1.0323294206241005 1.116629637293453 0.9805790261561789 0.8797176374912702 0.9388465746932777 1.0333163550981823 0.8988547457502339 0.9038174692926723 1.0153479602262656 0.9009303213707869 1.0 11.894171745246371 -5.778460899886989 24.652598911211726 0.9806035138006722 1.0744795100804858 0.3042193426635431 0.05936305019684481 173.13332347207526 250753.527200244 0.008207935446510344 0.025617774253633985 1.665478766316005e-06 5.778460899886989 0.09387599627981358 KREDS(ph)APPSSVAR ddPTM_A549_MK2206_60min_R1 3 KREDSAPPSSVAR 13 2 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 KREDS(1)APPSSVAR;KREDS(1)APPSSVAR;KREDS(0.851)APPS(0.149)SVAR 166.92 2.2269e-20 119963000.0 9780.7 9762.0 9867.7 8698.4 11806.900000000001 8993.0 9191.4 9533.8 13002.7 15140.2 14626.199999999999 True False 11431.443044843385 10258.84410312675 11267.088239492876 10829.50839048601 10070.12065050586 9944.633290929733 10861.358404591305 10885.24534603798 10057.609211045186 11720.018304674426 10994.110877415704 1.0397787663144327 0.9331217610512414 1.0248294168688008 0.9850281219859421 0.9159558933676101 0.9045418407920711 0.9879251287980821 0.9900978321401727 0.914817880516896 1.0660269334512438 1.0 13.424443313927807 -5.247738203268195 23.362245270624545 0.9609312515867199 1.03977889980406 0.09634679712897998 0.04946699896799116 1099.712664676204 1875067.7305334127 0.005823184602619724 0.14871843991578357 5.652776267112864e-06 5.247738203268195 0.07884764821734014 KREDS(ph)APPSSVAR ddPTM_A549_PD325901_60min_R1 8 KREDSAPPSSVAR 13 2 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 KREDS(0.996)APPS(0.002)S(0.002)VAR;KREDS(0.737)APPS(0.199)S(0.064)VAR;KREDS(0.998)APPS(0.001)S(0.001)VAR;KREDS(0.698)APPS(0.245)S(0.058)VAR;KREDS(1)APPSSVAR;KREDS(1)APPSSVAR;KREDS(1)APPSSVAR;KREDS(0.905)APPS(0.095)S(0.001)VAR 179.79 2.5061e-23 246188000.0 28138.199999999997 30296.600000000002 28321.199999999997 27998.3 32407.399999999998 27661.6 29710.6 30203.499999999996 29651.899999999998 32308.0 33438.5 True False 30994.76934975197 32849.80080792694 30243.246941210622 29727.691402247146 30131.216023460634 27436.333100774238 30841.25314126413 29601.06749831263 28405.733760259853 30268.067366282212 29325.77648411607 1.0569121457547725 1.1201681505592738 1.031285461702659 1.0137051756617175 1.0274652417057335 0.9355705590825455 1.051677290044439 1.0093873393035533 0.9686268247882696 1.0321318305988085 1.0 14.839881687801624 -6.167183886293956 1.40045963454921 0.9902216064252085 1.0901593374061347 0.4063817828842764 0.03521824184112919 0.2514354879720751 0.88528709140619 0.004690636572422694 0.021674296649746662 6.804811725412282e-07 6.167183886293956 0.09993773098092618 KREDSAPPS(ph)SVAR ddPTM_A549_MK2206_60min_R1 1 KREDSAPPSSVAR 13 2 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 KREDS(0.005)APPS(0.695)S(0.3)VAR 106.3 1.9401e-05 31900000.0 4016.4 4099.8 3355.5 3407.9 4189.2 3079.4 3328.2 3361.8 5073.9 6106.9 5855.3 True False 4694.270128447758 4308.4623083383585 3831.3603562753533 4242.835652986445 3572.9742293996837 3405.260064059716 3932.8908590814017 3838.345445080711 3924.669751353347 4727.34704857375 4401.2674119410485 1.0665723504351874 0.9789140047816905 0.8705129676693845 0.9640031508822292 0.8118057584290088 0.7736998789987012 0.8935814371131148 0.8721000307018206 0.8917135415824433 1.0740876675086855 1.0 12.103703314236165 -5.4364549393133 3.219417884928607 0.9154016644021026 1.066284863860656 0.2611954538385798 0.08023339620213445 0.2962942570005083 5.225350969974473 0.010826232028114908 0.08666861415866751 3.6605391890215033e-06 5.4364549393133 0.15088319945855333 KREEGS(ph)DIEDEDMEELLNDTR ddPTM_A549_MK2206_60min_R1 10 KREEGSDIEDEDMEELLNDTR 21 2 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR 237.13 1.2922999999999997e-86 781192000.0 14231.150000000001 16482.49 14746.65 13425.83 21062.63 15477.279999999999 14521.289999999999 15383.019999999999 23177.210000000003 19432.15 22246.899999999998 True False 16633.020201787494 17321.378338593087 16837.946713714184 16715.158952708418 17964.345028497235 17115.075496613026 17159.620426377674 17563.610193522964 17927.608941398994 15042.4138187857 16722.380746795432 0.9946562306910119 1.0358201144243437 1.0069108560957085 0.9995681360090789 1.0742695852048343 1.0234831843481884 1.0261469754936678 1.050305602979931 1.0720727636125928 0.8995378138168711 1.0 14.029492636483027 KREEGS(ph)DIEDEDMEELLNDTR ddPTM_A549_PD325901_60min_R1 11 KREEGSDIEDEDMEELLNDTR 21 2 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR 230.75 8.900799999999997e-77 1383008900.0 29476.81 30702.45 31706.51 30261.310000000005 34839.55 30739.929999999997 31193.73 34118.49 32937.549999999996 34275.49 35574.15 True False 32469.274051519384 33289.85321175764 33858.30443533336 32130.482390278547 32392.540197922655 30489.5942018713 32380.82446501401 33437.96995151237 31553.299316915516 32111.329711908274 31198.75507311686 1.0407233870526231 1.067025050638723 1.085245368155993 1.0298642466655514 1.0382638705297074 0.9772695779179784 1.0378883512860329 1.0717725714743338 1.0113640510003605 1.0292503542738396 1.0 14.929200841788445 -5.479152128497052 0.15598332169965223 0.987377104113818 1.1266370225411633 0.1560412268817598 0.02787688761340112 15.817742468398668 0.43272795413725684 0.06273861463719448 0.4558488838260975 3.317782189979051e-06 5.479152128497052 0.1392599184273453 KREESYLSNSQT(ph)PER ddPTM_A549_MK2206_60min_R1 2 KREESYLSNSQTPER 15 2 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 KREESYLS(0.005)NS(0.03)QT(0.965)PER;KREESYLSNS(0.002)QT(0.998)PER 99.569 1.7408e-05 10412400.0 2220.2 2233.0 2520.6 1910.3600000000001 3012.4 2566.6 2260.54 1785.1799999999998 3677.6 3765.2999999999997 3469.1 True False 2594.915481321509 2346.650162085846 2878.058981978142 2378.3982857593187 2569.27995050215 2838.195908428807 2671.25085709629 2038.2347318844627 2844.629471920429 2914.71611488558 2607.6267277107404 0.9951253581449556 0.8999179741289092 1.1037081923549759 0.9120930770054411 0.985294376376386 1.0884210835346382 1.0243992472961825 0.781643595774096 1.0908882938233093 1.1177658534910155 1.0 11.34852165245875 KREESYLSNSQT(ph)PER ddPTM_A549_PD325901_60min_R1 2 KREESYLSNSQTPER 15 2 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 KREESYLS(0.009)NS(0.022)QT(0.969)PER;KREESYLS(0.002)NS(0.002)QT(0.996)PER 103.9 1.1019e-05 23562000.0 4173.9 3994.5 3432.7 3858.2 5383.200000000001 4215.3 4008.3999999999996 4404.5 4134.2 4024.2 3992.1 True False 4597.631255337218 4331.130533698968 3665.6636645019857 4096.512251392049 5005.102603031818 4180.971994378262 4160.941855480644 4316.648792236591 3960.453951067765 3770.1113252257333 3501.097008006933 1.3131973335279015 1.2370781283105743 1.047004312110945 1.170065337242417 1.4295812402756214 1.1941891312398571 1.1884680275824009 1.2329417843505934 1.131203717580602 1.0768371503570369 1.0 11.773591321016225 -9.517163663280591 0.6547326921302908 1.0116179533763856 1.2294520774079638 0.37777569460224647 0.09193719714469431 0.431093760649566 0.4046328190940151 0.03884445215666641 0.022791369513995373 3.0397392882182336e-10 9.517163663280591 0.2178341240315782 KRENS(ph)LQEDR ddPTM_A549_PD325901_60min_R1 2 KRENSLQEDR 10 2 P41002 P41002 CCNF Cyclin-F 1 KRENS(1)LQEDR;KRENS(1)LQEDR 75.462 0.00050638 29709000.0 3739.9 3466.5 3347.5 3225.9 4587.9 4317.4 3578.1000000000004 3317.7 3853.5 4801.9 5003.6 True False 4119.571894831132 3758.6341206828097 3574.6814801527667 3425.1565164495387 4265.661731395764 4282.2405258294075 3714.2665535114506 3251.525870814698 3691.5507959072233 4498.707214502621 4388.188920433729 0.9387863580002734 0.8565342533865442 0.8146143078542399 0.7805398943742367 0.9720779594362007 0.9758560088169927 0.8464235749322141 0.7409721709277085 0.8412470071006765 1.0251854001896454 1.0 12.099409922688007 -10.691326147617065 1.014361571349782 0.9979512202203831 0.8615547639024282 0.3845638128476644 0.0717961525395588 0.5033846558800806 0.942223977478321 0.04740592807465377 0.013246693036416774 2.0355128687425905e-11 10.691326147617065 -0.13639645631795483 KREPADVPYQT(ph)GQLHPAIR ddPTM_A549_MK2206_60min_R1 1 KREPADVPYQTGQLHPAIR 19 2 E7EPS8;P28827;P28827-2 E7EPS8 PTPRM Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase mu 1 KREPADVPYQT(1)GQLHPAIR 146.06 3.4335e-21 15123000.0 2079.8 3221.9 1992.8 1993.6 3311.8 2678.0 2518.3 2430.7 3910.3 3828.4 4259.8 True False 2430.819393771946 3385.880948152435 2275.409005509024 2482.0320894961037 2824.6386071149323 2961.3841824874717 2975.8425125968056 2775.25916870655 3024.6232934659715 2963.561781060726 3201.97409550091 0.759162729388563 1.0574354592405766 0.7106269250292182 0.7751568299642411 0.8821553588093759 0.9248620051762783 0.9293774477370564 0.8667337979423579 0.9446120434627706 0.9255420851857681 1.0 11.644745920922395 -8.571091983906863 0.4292854715696787 0.9982071368358529 0.8355626825539817 0.1993386826424145 0.0895660712631198 0.8453377805065194 0.39067506813038233 0.039071472571610755 0.04305864600555509 2.684775747857294e-09 8.571091983906863 -0.16264445428187124 KREPADVPYQT(ph)GQLHPAIR ddPTM_A549_PD325901_60min_R1 1 KREPADVPYQTGQLHPAIR 19 2 E7EPS8;P28827;P28827-2 E7EPS8 PTPRM Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase mu 1 KREPADVPY(0.001)QT(0.999)GQLHPAIR 75.646 0.00027535 9132800.0 881.66 807.6 960.7 743.95 1008.3 880.61 1088.1 627.46 988.21 1127.1 937.35 True False 971.1654741562116 875.6592862724466 1025.8988791584063 789.9021018669619 937.480486446162 873.4386041253146 1129.508240931167 614.9448180671523 946.6789702928454 1055.934713647911 822.0618923512183 1.1813775619479638 1.0651987331123351 1.2479581996243425 0.9608791128946816 1.1404013434619011 1.0624973767208103 1.3739941620461287 0.7480517267481155 1.151590870591512 1.284495393196955 1.0 9.683103207071872 -14.999999999995364 0.26919507396206144 0.2522246606361827 1.1186864606096592 0.0 0.17342006545145808 97.85513027451523 1.2802231115919365 39.57695659781547 0.06224591751048832 1.0000000000106755e-15 14.999999999995364 0.8664617999734765 KREPEDEGEDDD ddPTM_A549_MK2206_60min_R1 1 KREPEDEGEDDD 12 2 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 74.76 0.00063881 4104000.0 694.66 697.82 769.46 739.51 826.19 531.81 434.84 567.99 510.56 1005.9 1618.0 False True 811.9016251935861 733.3360573697921 878.5809982833066 920.6899831978654 704.6585454472747 588.0857812130923 513.8447993398701 648.5043218964222 394.91897519678434 778.6664913721092 1216.2059454717296 0.6675691960037854 0.6029702947105338 0.7223949213161687 0.7570181568556282 0.5793908080049378 0.4835412813123452 0.42249818071771156 0.5332191676179374 0.3247138995391173 0.6402422996461244 1.0 10.248171831990723 -10.998030738506438 1.2905000606702646 0.9987563393330271 0.5443534008905929 0.15742671890427962 0.15897451754412062 0.26141198468309207 0.7783454796237474 0.1029884235248338 0.023777912897478857 1.0045446880714288e-11 10.998030738506438 -0.4544029384424342 KREPEDEGEDDD ddPTM_A549_PD325901_60min_R1 2 KREPEDEGEDDD 12 2 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ; 95.40100000000001 0.00012751 17901700.0 2657.2 2747.2 3000.3 2470.3999999999996 2974.3 3226.5 2591.69 2510.6000000000004 3004.7 3044.1000000000004 3118.3 False True 2926.9569878727466 2978.716185299237 3203.9184002695574 2622.990997314528 2765.395428777963 3200.2244537426673 2690.318181177184 2460.5241134724 2878.4229081257117 2851.8950064906444 2734.768868532355 1.070275818023163 1.089202169724054 1.1715499752595095 0.959127123134975 1.0111989574687692 1.170199240808275 0.9837460898920406 0.8997192200717381 1.0525287680601871 1.0428285327166045 1.0 11.417203192154224 KRES(ph)ES(ph)ESDETPPAAPQLIK ddPTM_A549_MK2206_60min_R1 2 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.871)ES(0.565)ES(0.474)DET(0.091)PPAAPQLIK;KRES(0.983)ES(0.843)ES(0.13)DET(0.044)PPAAPQLIK 76.691 0.00010149 32883000.0 4118.5 5195.9 4461.6 4231.6 5747.799999999999 4884.4 4093.5 4934.4 7947.1 6073.5 6691.3 True False 4813.602112342422 5460.349116516728 5094.321968576407 5268.342189963744 4902.306234064616 5401.263965997684 4837.235962877748 5633.866310966225 6147.094538910933 4701.492131771055 5029.665539514824 0.9570421878999843 1.085628671254242 1.0128550156175633 1.0474537816826572 0.9746783748442857 1.0738813393382627 0.9617410789792519 1.1201274253137883 1.2221676552083223 0.9347524392694658 1.0 12.296246752182684 -8.283346304396007 23.898376618286395 1.1089850075072991 1.0205514794111743 0.009899937608405907 0.08125588633159847 574.971821061747 627237.8375717308 0.014083186550525647 0.017033830975866193 5.2077927852528705e-09 8.283346304396007 -0.08843352809612481 KRES(ph)ES(ph)ESDETPPAAPQLIK ddPTM_A549_PD325901_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.959)ES(0.782)ES(0.151)DET(0.109)PPAAPQLIK 142.94 2.3768000000000003e-21 59726000.0 6017.9 5954.7 6402.7 6836.2 5627.8 6555.2 6322.3 6549.3 6311.1 7494.0 7777.4 True False 6628.832777856168 6456.523467021469 6837.22572456284 7258.456547863338 5232.522742856008 6501.816624569632 6562.8985861953115 6418.669073673544 6045.866414441439 7020.827561065958 6820.829105000651 0.9718514678803898 0.9465892441562428 1.0024039041749584 1.0641604467911157 0.7671388129369514 0.9532296623298865 0.962184873006679 0.9410394212879097 0.8863829193446509 1.029321722181645 1.0 12.73573140118004 KRES(ph)ESES(ph)DETPPAAPQLIK ddPTM_A549_PD325901_60min_R1 2 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.902)ES(0.106)ES(0.554)DET(0.437)PPAAPQLIK;KRES(0.639)ES(0.362)ES(0.666)DET(0.333)PPAAPQLIK 163.74 1.0729000000000001e-27 115603000.0 16556.5 18380.4 19719.4 17375.7 18186.6 16416.0 16208.7 19101.5 16953.6 20638.1 19584.8 True False 18237.3036917489 19929.3808140194 21057.677066385208 18448.957525922142 16909.235956363955 16282.313538707447 16825.530948240965 18720.505597663134 16241.099149732116 19335.00684387983 17175.993758276138 1.0617903073562411 1.1603043814810752 1.2259946855324575 1.0741129617046254 0.9844691488791647 0.9479692277404284 0.9795957768169131 1.089922706139945 0.9455696932764924 1.1256994568109566 1.0 14.068105951586201 -6.5873239581860865 3.618186646677562 0.9817045539076388 1.1511237252035815 0.41341498547094413 0.06695413931167908 0.0993260204547397 2.629580535278009 0.00741037366126036 0.016503435018191973 2.586282980170858e-07 6.5873239581860865 0.16941917129594275 KRES(ph)ESESDET(ph)PPAAPQLIK ddPTM_A549_MK2206_60min_R1 2 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.952)ES(0.048)ES(0.01)DET(0.991)PPAAPQLIK;KRES(0.991)ES(0.03)ES(0.174)DET(0.805)PPAAPQLIK 138.93 4.2381000000000003e-16 37808000.0 8334.099999999999 8879.6 8724.5 7113.299999999999 12194.8 11065.6 9052.7 10414.400000000001 13880.800000000001 13197.300000000001 13303.6 True False 9740.692330817763 9331.533712161887 9961.765289323308 8856.058819328175 10400.961074353881 12236.554447249202 10697.458409953182 11890.673092762376 10736.82096308274 10216.020764077086 9999.948959318735 0.974074204822878 0.9331581341188779 0.9961816135111525 0.8856104021486435 1.0401014161838749 1.2236616903775517 1.0697513010788373 1.1890733783877683 1.0736875764828109 1.021607290760919 1.0 13.287705015916883 -6.921142456458407 7.622173167838915 1.0658598998664606 0.9504664040147073 0.4707437007845313 0.06982443820850341 0.218082821649021 18.187881081125237 0.011218577417208829 0.02127311445233332 1.1991059101695233e-07 6.921142456458407 -0.11539349585175329 KRES(ph)ESESDET(ph)PPAAPQLIK ddPTM_A549_PD325901_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.845)ES(0.159)ES(0.329)DET(0.668)PPAAPQLIK 149.99 7.8268e-20 86106000.0 12034.0 12413.0 12081.0 11275.0 13170.0 10601.0 11394.0 12729.0 10940.0 13059.0 14117.0 True False 13255.682821037428 13459.087073427283 12900.88930895461 11971.431142617108 12244.984634033477 10514.668970750346 11827.604905036038 12475.110109292671 10480.229844874797 12234.452511337115 12380.698495036168 1.0706732601841544 1.0871024020836528 1.0420162734862661 0.9669431128960011 0.9890382710590115 0.84927914002316 0.9553261401025247 1.0076257098332826 0.8464974612762494 0.9881875821660879 1.0 13.595805090458457 -6.305418491772094 1.4128956269142188 0.9308217723318983 1.084001326568382 0.48395781019006845 0.05327234867027571 0.3034774541952767 1.1203849010075813 0.009491475167171004 0.03733102897482168 4.949729985529475e-07 6.305418491772094 0.15317955423648377 KRES(ph)ESESDETPPAAPQLIK ddPTM_A549_MK2206_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.491)ES(0.491)ES(0.017)DETPPAAPQLIK 124.81 1.6108e-15 37182000.0 1426.0 1576.5 1316.3 1321.1 2089.6 1706.7 1580.5 1577.8 1968.9 2216.2 2046.7 True False 1666.673937647273 1656.737116224066 1502.9711330547607 1644.7695593064332 1782.2226080763814 1887.3018611842292 1867.6563916766274 1801.4579818098484 1522.9472936872237 1715.558880782253 1538.4479039536404 1.0833476605636798 1.0768886693962372 0.9769398945471547 1.0691096884591007 1.1584549619758115 1.2267570818186777 1.213987413468443 1.1709580657104484 0.9899245140335386 1.115123155209518 1.0 10.587259875567696 -8.77408290579077 24.894416289627287 0.9952421159911996 1.1217155993088048 0.15354439200310765 0.07684324597722073 169.9223394198047 334566.5372124569 0.013338918449637981 0.014246807202928816 1.6823528732247442e-09 8.77408290579077 0.12647348331760522 KRES(ph)ESESDETPPAAPQLIK ddPTM_A549_PD325901_60min_R1 5 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.97)ES(0.03)ESDETPPAAPQLIK;KRES(0.997)ES(0.003)ES(0.001)DETPPAAPQLIK;KRES(0.702)ES(0.29)ES(0.008)DETPPAAPQLIK;KRES(0.492)ES(0.492)ES(0.013)DET(0.003)PPAAPQLIK;KRES(0.489)ES(0.489)ES(0.022)DETPPAAPQLIK 175.47 2.6246999999999996e-35 122812000.0 10609.1 11860.199999999999 12071.9 11273.4 13832.400000000001 12798.5 11975.5 13115.8 12930.7 13596.4 13303.9 True False 11686.128021993361 12859.700677375517 12891.171728231873 11969.732314250967 12860.859943189422 12694.273259329148 12431.234205745044 12854.19507985395 12387.267646720518 12737.920983623862 11667.604640370595 1.0015875907860876 1.1021714459607415 1.104868747748588 1.0258945758956377 1.102270803613802 1.0879930928929678 1.0654487008183535 1.1016995755390684 1.061680441575801 1.0917340256413823 1.0 13.51022078565303 -10.177950230697546 0.7393754568727586 1.0016089592978048 1.0754428182595388 0.0 0.04155536939215373 0.4458344116643232 0.470088924999226 0.017161892927549275 0.006258569774095952 6.638191384246204e-11 10.177950230697546 0.073833858961734 KRES(ph)IEGK ddPTM_A549_MK2206_60min_R1 2 KRESIEGK 8 2 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 KRES(1)IEGK;KRES(1)IEGK 63.408 0.0020348 10212800.0 4044.2 4540.1 3941.8 3508.8 3130.1000000000004 2542.5 2816.5 2544.6 3474.5 6594.299999999999 6639.299999999999 True False 4726.762088803013 4771.171697665005 4500.8065124023815 4368.456157516018 2669.666436418396 2811.5456624250896 3328.2215926334848 2905.3048425106736 2687.531297636375 5104.643050059745 4990.578574641813 0.9471370940477107 0.9560357834877782 0.9018606650683615 0.8753406227712892 0.5349412691313061 0.5633706834536477 0.6669009500311013 0.5821579199800886 0.5385209865830568 1.0228559622320181 1.0 12.284991366432934 -6.5418096937646775 24.15733418875237 0.721448148938837 0.9290281953111758 0.2984715017013593 0.1612017463276884 203.13941528640652 259220.62224364118 0.028159939474877067 0.0586281592164481 2.872038823113608e-07 6.5418096937646775 0.20758004637233873 KRESES(ph)ESDETPPAAPQLIK ddPTM_A549_MK2206_60min_R1 2 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.111)ES(0.807)ES(0.081)DET(0.002)PPAAPQLIK;KRES(0.145)ES(0.709)ES(0.145)DETPPAAPQLIK 150.36 5.078000000000001e-22 39706000.0 3328.8999999999996 3450.5 3137.9 3148.7 4061.2 3738.5 3946.6000000000004 3142.0 5239.9 5401.1 4342.5 True False 3890.7369362089803 3626.11571172289 3582.901404248676 3920.131641350516 3463.802859839108 4134.105588584543 4663.646134382145 3587.3881219714403 4053.0710164008774 4180.987758773139 3264.137403097026 1.1919648151200481 1.110895548784931 1.097656428571054 1.2009701667678205 1.0611694399116405 1.2665231508520711 1.428753008362105 1.0990309778527438 1.2416974274904322 1.2808859562119541 1.0 11.6724860731585 -10.845461176292629 1.0358077037797215 0.9975180153804682 1.1905956280126357 0.0 0.12774486716250827 0.5153286449701528 0.9603597483511517 0.07403523791642716 0.01717796802438603 1.427377424709312e-11 10.845461176292629 0.1930776126321675 KRESES(ph)ESDETPPAAPQLIK ddPTM_A549_PD325901_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.142)ES(0.799)ES(0.059)DETPPAAPQLIK 128.98 3.4449e-17 16088000.0 2533.9 2504.7 3310.5 2759.2 3176.1 3332.1 3065.1 3427.5 3239.9 3206.8 3253.1 True False 2791.1396626414116 2715.779859245414 3535.1704376536914 2929.6295174021384 2953.02169295017 3304.9644823542326 3181.7440577870752 3359.1358236782658 3103.738270055747 3004.3221007240886 2852.989323099959 0.9783211034272838 0.9519067727510954 1.2391109945734033 1.0268631199148355 1.0350623008085844 1.1584216090802517 1.1152316736782957 1.1774091814785852 1.0878899002269424 1.053043583584006 1.0 11.478258632514224 -3.670887409390195 15.944787343358186 1.063718801891671 0.5100249361779394 0.0 0.08636215628515392 0.0 0.0 0.011500938004439028 0.0 0.0002133597975575398 3.670887409390195 -0.5536938657137316 KRESESES(ph)DETPPAAPQLIK ddPTM_A549_MK2206_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.262)ES(0.262)ES(0.403)DET(0.074)PPAAPQLIK 97.23299999999999 3.9097e-07 13877000.0 1116.5 1665.1 1558.2 1244.2 2000.4 1026.6 1388.3 1024.3 2305.0 1897.8 1565.4 True False 1304.9379041957775 1749.8464777828672 1779.1761904777995 1549.0290558542595 1706.1438099138559 1135.2341305980726 1640.5361395537261 1169.4976617871896 1782.9211803286362 1469.0856619206565 1176.6679771578777 1.1090111480281148 1.487119996253696 1.512046069933185 1.3164538220847841 1.4499789601097783 0.9647871384586464 1.3942217952733573 0.9939062543471208 1.5152287773098931 1.2485133363356111 1.0 10.200491574211991 -11.056039212380403 1.3454903463150292 0.9990066428415043 1.3294726962081502 0.04991050129851482 0.20455864453036018 0.459288241463478 1.4756444906684025 0.13786614217988008 0.030244681933496484 8.789431536091182e-12 11.056039212380403 0.3304660533666459 KRET(ph)DDEGEDD ddPTM_A549_MK2206_60min_R1 14 KRETDDEGEDD 11 2 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD 168.0 1.0552e-14 21506458000.0 111826.15 128141.57000000002 115474.62000000001 111393.92000000001 7683.722 4481.870000000001 4812.57 7557.838000000001 11172.780999999999 164604.28 166693.63 True False 130699.67023312376 134663.42857610184 131850.65749484772 138685.4354006631 6553.456672364988 4956.138508575474 5686.951674084902 8629.184681408153 8642.163942765013 127420.05882536284 125299.00116085574 1.043102251592052 1.0747366485645347 1.0522881768672772 1.1068359214022958 0.05230254520506371 0.03955449335316653 0.045387047154383416 0.06886874277896454 0.06897232909040048 1.0169279694559108 1.0 16.93501538848985 -6.743624220678178 24.978674078164374 0.4041086702663734 1.0684226734939755 0.5030446678137859 0.349428348390247 216.66290512344003 303781.89195740793 0.062223451542542205 0.12931072313055014 1.804578502095892e-07 6.743624220678178 0.664314003227602 KRET(ph)DDEGEDD ddPTM_A549_PD325901_60min_R1 14 KRETDDEGEDD 11 2 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD 160.84 3.305e-13 51104958000.0 74567.21 77550.06 77505.11 75082.23 88458.57999999999 82135.76000000001 77851.13999999998 81686.09 84916.45 81607.53 88781.8 True False 82137.21826572146 84085.47571815914 82765.07284068778 79719.8888229836 82245.55450633417 81466.87360258446 80813.80773447828 80056.79685345221 81347.70691140935 76454.81662857173 77862.2014342 1.054904905753714 1.079926770234185 1.0629685690383557 1.0238586548359219 1.0562962900020039 1.0462955336734308 1.0379080766522204 1.0281856328080683 1.0447650517582 0.9819246723094821 1.0 16.248635514798536 KRETDDEGEDD ddPTM_A549_MK2206_60min_R1 2 KRETDDEGEDD 11 2 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 ; 64.439 0.0030524999999999997 5784500.0 1155.87 1187.84 1096.73 807.9100000000001 470.74 324.37 247.61599999999999 280.42 710.46 1788.87 1611.3200000000002 False True 1350.952597691692 1248.2959823251467 1252.2628054054146 1005.8479862684578 401.4947695855072 358.6946181006201 292.6046220065802 320.170393750233 549.5419443714892 1384.7630245758276 1211.1847738303502 1.115397606443919 1.0306404186187323 1.0339155779222322 0.8304661749399982 0.3314892807938686 0.2961518554813522 0.24158545279695295 0.2643447974809821 0.45372263278506436 1.143312774810188 1.0 10.24220325865722 -6.479117582346234 4.10197151828618 0.6022709141884799 1.049286755479256 0.3864876932197596 0.2849931610254187 0.23199268851570015 8.28246409441401 0.04662961773729517 0.10950396259125258 3.3180461149595165e-07 6.479117582346234 0.4470158412907761 KRETDDEGEDD ddPTM_A549_PD325901_60min_R1 1 KRETDDEGEDD 11 2 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 67.153 0.0023478 3130200.0 758.4 607.91 782.06 577.6 871.0 638.81 760.43 1036.1 803.85 871.67 931.19 False True 835.3922096954283 659.1407091603305 835.1352945088195 613.2770401752233 809.8239647868767 633.6077431567807 789.3685797732626 1015.4341726952737 770.0669799636746 816.6326074398669 816.6595332997613 1.0229381714555839 0.8071181224041228 1.0226235786832805 0.7509580371850201 0.9916298429955687 0.7758529929806256 0.9665822139904153 1.243399643658541 0.9429473955347993 0.9999670292713224 1.0 9.673590931554893 -7.98511605832496 24.95610817075391 0.9979341450526981 0.8928386149450949 0.2356235110483046 0.11598539449343871 323.27661075824307 542040.3677076118 0.017119006772926774 0.02364882950984358 1.0348655782812469e-08 7.98511605832496 -0.1050955301076032 KREVS(ph)PPGAR ddPTM_A549_MK2206_60min_R1 1 KREVSPPGAR 10 2 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 KREVS(1)PPGAR 53.448 0.0043467 3749400.0 761.39 472.18 677.22 531.08 953.38 687.01 430.4 352.2 1061.0 1309.4 1275.6 True False 889.8940178017227 496.2119451561554 773.2599792808218 661.1946238410868 813.1390649348496 759.70894219967 508.5981088121611 402.1254285672636 820.6851940688433 1013.6056305822046 958.8333152309876 0.9281008530532159 0.5175163787843725 0.8064592322749441 0.6895824470615123 0.8480504922161162 0.7923263930568082 0.5304343317374588 0.41939033842434814 0.8559206079224899 1.0571239176623959 1.0 9.905136226925643 -8.973518078982556 11.245782371411284 0.9365826593834871 0.6892057467334068 0.40689932572757237 0.15157621198508867 0.38210710613788224 159.35355848797545 0.026299741112914023 0.027355918918809608 1.0628743366012412e-09 8.973518078982556 -0.24737691265008022 KREVS(ph)PPGAR ddPTM_A549_PD325901_60min_R1 2 KREVSPPGAR 10 2 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 KREVS(1)PPGAR;KREVS(1)PPGAR 62.088 0.0014793 16751400.0 1924.3700000000001 1864.4899999999998 1546.6 2309.12 2397.5 2468.1000000000004 2003.14 2291.3 2388.5 2586.3999999999996 2566.6 True False 2119.7306257536798 2021.617115728224 1651.5615764613208 2451.749098007985 2229.1078709259887 2448.000611895947 2079.3705888602667 2245.5982240099224 2288.119651232491 2423.0942626022156 2250.924471017909 0.941715572000112 0.898127476846885 0.7337258969486677 1.0892187319369537 0.9903077156195941 1.0875534223451382 0.9237851450075254 0.9976337513423638 1.0165244017262656 1.0764884800894488 1.0 11.136301933139615 -6.273381440172225 24.982828205228486 1.0100395629202512 0.861883423894697 0.5421989399074463 0.06669489050975469 390.0986649313516 816087.3595919315 0.008204441926620006 0.019202260818666994 5.328666739224554e-07 6.273381440172225 -0.14815613902555425 KRFS(ph)FK ddPTM_A549_PD325901_60min_R1 2 KRFSFK 6 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 KRFS(1)FK;KRFS(1)FK 63.486000000000004 0.012296 2047690000.0 6450.9 7145.6 6861.2 7119.9 7256.2 5676.8 6783.0 6663.299999999999 7221.1 8474.2 7377.0 True False 7105.790619098416 7747.784789485381 7326.842291747318 7559.6800525338895 6746.549544531037 5630.570022937043 7041.130776800024 6530.395254242271 6917.622279051682 7939.1375657839835 6469.675766655927 1.098322524247809 1.197553798509765 1.1324898736825644 1.16847896636424 1.0427956188008818 0.8703017316503631 1.088328230154797 1.0093852442960567 1.0692378611466786 1.2271306711692598 1.0 12.659477696793513 -6.8137288232145865 5.966227137408546 1.0235536772616174 1.1514662372114004 0.2470332128367062 0.084074204998331 0.1174510724040601 9.064320635750798 0.008302872350697649 0.01600216614079064 1.5355755085670065e-07 6.8137288232145865 0.127912559949783 KRFSVY(ph)VT(ph)ES(ph)QPDLS(ph)GKK ddPTM_A549_PD325901_60min_R1 1 KRFSVYVTESQPDLSGKK 18 3 F5H0D0;Q14232 F5H0D0 EIF2B1 Translation initiation factor eIF-2B subunit alpha 4 KRFS(0.266)VY(0.773)VT(0.965)ES(0.998)QPDLS(0.998)GKK 40.012 0.016198 24668000.0 3226.3 3318.3 2833.8 3102.9 4414.8 3831.8 3473.9 3355.2 4447.0 3842.2 3503.9 True False 3553.8316009234704 3597.944786574864 3026.118709023721 3294.559085802806 4104.719678233181 3800.595091229243 3606.1011654910203 3288.2779038965186 4260.108054859071 3599.602836286047 3072.9425130521504 1.1564914038673912 1.1708467604886184 0.984762551258428 1.072118684879184 1.335761948295035 1.2367934235952769 1.1735010174041032 1.0700746564342625 1.3863285879135394 1.1713863246699008 1.0 11.585405062686247 KRGS(ph)VR ddPTM_A549_PD325901_60min_R1 1 KRGSVR 6 2 A0A0A0MSW4;P48739;P48739-3 A0A0A0MSW4 PITPNB Phosphatidylinositol transfer protein beta isoform 1 KRGS(1)VR 43.246 0.044767 93699000.0 3437.2 2846.1 2445.9 3232.0 3088.5 2796.2 2341.3 3691.6 2551.2 3299.3 3920.2 True False 3786.142013667097 3085.9508353888186 2611.8934823915315 3431.6332995954344 2871.574414746576 2773.4286742771546 2430.39945270852 3617.968141995825 2443.9819360369806 3090.9816349379416 3438.040252195279 1.1012500540822772 0.8975900830184748 0.7597041601603614 0.9981364521268319 0.8352358332375546 0.8066888316698001 0.7069141936766581 1.052334433747731 0.7108648406534606 0.8990533583672468 1.0 11.747370720491023 -5.283494484575756 4.082668641767919 0.8603971458280055 1.1171708515814067 0.27109591264197375 0.11143370360794455 0.23274160976098376 8.144552439063634 0.016999299929958675 0.16792656684650425 5.206016202614798e-06 5.283494484575756 0.2567737057534012 KRHNS(ph)ISEAK ddPTM_A549_PD325901_60min_R1 1 KRHNSISEAK 10 2 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 KRHNS(0.997)IS(0.003)EAK 46.88 0.0070414 2926900.0 675.39 775.95 612.35 728.79 801.27 933.19 535.58 1238.6 922.72 1095.4 939.23 True False 743.9550956041602 841.3420296967619 653.9077533596852 773.8057030978206 744.9915594314363 925.5904100381588 555.9617899806213 1213.895151337097 883.9412872452356 1026.236257057866 823.7106642695201 0.9031752627166866 1.0214048041284953 0.7938561217239808 0.9394144529912624 0.9044335489963661 1.1236838979849646 0.674947908406233 1.4736911927850285 1.073121091650706 1.2458698200392353 1.0 9.685993856641044 KRKPS(ph)PEPEGEVGPPK ddPTM_A549_MK2206_60min_R1 4 KRKPSPEPEGEVGPPK 16 3 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 KRKPS(1)PEPEGEVGPPK;KRKPS(1)PEPEGEVGPPK;KRKPS(1)PEPEGEVGPPK;KRKPS(1)PEPEGEVGPPK 109.65 1.579e-07 25367100.0 3373.85 4453.43 4320.07 3578.3999999999996 6547.5 5038.46 4523.27 4194.6900000000005 7905.0 6422.0 7369.4 True False 3943.2733972869905 4680.090564862504 4932.720886405746 4455.108160640478 5584.371423420804 5571.626492940933 5345.0896088447635 4789.30015319936 6114.530121691051 4971.265739727298 5539.374594906898 0.711862563133495 0.8448770677407426 0.8904833572622203 0.8042619404610524 1.008123088219251 1.0058222995180157 0.9649265485239494 0.8645922154466347 1.1038304084567547 0.8974416975335194 1.0 12.435507387333967 -5.250881826754753 0.3659186686370061 1.0439078452539001 0.5047075504488783 0.4242259277494198 0.0805969876391796 2.8418770518958634 0.2544803175592643 0.020958444717677483 0.6742401704167955 5.612006601765507e-06 5.250881826754753 -0.5392002948050219 KRKPS(ph)PEPEGEVGPPK ddPTM_A549_PD325901_60min_R1 3 KRKPSPEPEGEVGPPK 16 3 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 KRKPS(1)PEPEGEVGPPK;KRKPS(1)PEPEGEVGPPK;KRKPS(1)PEPEGEVGPPK 91.637 1.6411e-06 22376700.0 3932.1000000000004 3870.3999999999996 4922.700000000001 4181.55 4619.7 6410.0 4944.1 5012.1 5300.1 6046.799999999999 5498.5599999999995 True False 4331.283897340975 4196.572191169982 5256.784024599859 4439.834846510915 4295.228209099811 6357.799085228726 5132.250431015332 4912.129733583614 5077.355228594234 5665.004016046652 4822.271978243682 0.8981832457568001 0.870247926724866 1.090105255016004 0.9206935789896997 0.8907063368632672 1.3184239947296166 1.0642805827149855 1.0186339044635677 1.05289690243549 1.1747582968370651 1.0 12.235497306527025 -5.751547444502208 24.934789007395736 1.0345568936195844 0.8842155042100557 0.24157670861720193 0.11283060764335542 209.5662087832498 528245.8868301644 0.013880027974893457 0.05245529590959098 1.771954457390113e-06 5.751547444502208 -0.15034138940952868 KRKS(ph)DGSMEDANVR ddPTM_A549_MK2206_60min_R1 1 KRKSDGSMEDANVR 14 3 Q8IZT6;Q8IZT6-2 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 KRKS(0.984)DGS(0.016)MEDANVR 41.912 0.025949 3864200.0 910.42 834.73 811.42 759.79 1049.5 844.5 682.1 667.56 1447.7 1155.5 1407.4 True False 1064.0766383680439 877.214191579901 926.4915572310985 945.9385841082695 895.1199402642434 933.8644294662691 806.0287407545893 762.188674316759 1119.7982615018507 894.4717474703975 1057.9037377360396 1.0058350305531716 0.8292003896849612 0.8757805877629575 0.8941631930827842 0.8461260777656758 0.882749910180656 0.761911232565948 0.7204707263326966 1.0585067634776186 0.8455133634224663 1.0 10.046992642351173 -8.78376920188803 24.999734994740642 1.0276282175827864 0.8512880764091466 0.1754001983799911 0.0893468002955784 122.89459287647186 137588.13817380415 0.012381056561780898 0.013185468808783062 1.6452458276919894e-09 8.78376920188803 -0.17634014117363983 KRKS(ph)DGSMEDANVR ddPTM_A549_PD325901_60min_R1 1 KRKSDGSMEDANVR 14 3 Q8IZT6;Q8IZT6-2 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 KRKS(0.98)DGS(0.02)MEDANVR 40.515 0.030888 3477900.0 725.68 704.61 1064.1 1104.4 959.39 692.22 911.37 974.03 955.15 925.74 1094.6 True False 799.3504993826197 763.9899575290104 1136.316224953117 1172.6162797256172 892.0057561158227 686.5827898248092 946.0526840707993 954.6022075382464 915.0083671235984 867.2886184122231 959.9711392410984 0.8326818033451956 0.7958467981995582 1.1836983201926545 1.2215120140514064 0.9292005974481634 0.7152119076908756 0.9855011733151662 0.9944071946713977 0.9531623709510214 0.9034528049435474 1.0 9.9068472227964 -4.152549230446226 15.812806409172676 0.9699490431515472 0.9650325696290556 0.0 0.1449528715229292 0.0 0.0 0.018710401182191395 0.0 7.0380244227572e-05 4.152549230446226 -0.004916473522491582 KRKS(ph)EDGTPAEDGTPAATGGSQPPSMGR ddPTM_A549_MK2206_60min_R1 5 KRKSEDGTPAEDGTPAATGGSQPPSMGR 28 3 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KRKS(0.929)EDGT(0.052)PAEDGT(0.019)PAATGGSQPPSMGR;KRKS(0.781)EDGT(0.219)PAEDGTPAATGGSQPPSMGR;KRKS(0.802)EDGT(0.193)PAEDGT(0.005)PAATGGSQPPSMGR;KRKS(0.756)EDGT(0.221)PAEDGT(0.02)PAAT(0.002)GGS(0.001)QPPSMGR;KRKS(0.793)EDGT(0.202)PAEDGT(0.005)PAATGGSQPPSMGR 129.25 1.5191999999999999e-27 38477000.0 1386.18 1825.52 1406.6999999999998 1122.79 1680.7299999999998 1786.27 1336.89 1472.94 2180.66 2656.5299999999997 2383.82 True False 1620.1332951528025 1918.4311705736475 1606.191212389373 1397.8736004039583 1433.4968434495684 1975.2919057699378 1579.7856080155443 1681.733755689566 1686.7439917984561 2056.4180279597877 1791.851703914969 0.9041670645026129 1.0706417090109177 0.8963862404908 0.7801279521903411 0.8000086392850253 1.1023746560355274 0.8816497506818856 0.9385451664416149 0.9413412885190968 1.1476496762911657 1.0 10.807235527593628 -7.241716813359537 24.983527661661682 0.9694176516924143 0.8945083889428609 0.19620577401195338 0.101335160006451 1283.4282665154867 1625781.1048052832 0.012989913736618057 0.022480433129554136 5.731696509298665e-08 7.241716813359537 -0.07490926274955345 KRKS(ph)EDGTPAEDGTPAATGGSQPPSMGR ddPTM_A549_PD325901_60min_R1 3 KRKSEDGTPAEDGTPAATGGSQPPSMGR 28 3 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KRKS(0.956)EDGT(0.042)PAEDGT(0.003)PAATGGSQPPSMGR;KRKS(0.476)EDGT(0.476)PAEDGT(0.047)PAATGGSQPPSMGR;KRKS(0.822)EDGT(0.174)PAEDGT(0.004)PAATGGSQPPSMGR 74.846 2.4311000000000003e-06 55154000.0 906.75 991.56 1117.69 976.8999999999999 1062.59 926.87 845.01 1128.5300000000002 859.9100000000001 1072.04 952.6099999999999 True False 998.8025924859304 1075.122241080122 1193.5431646159655 1037.2408942991262 987.9573441364948 919.3218780227688 877.167317957215 1106.0205838353424 823.7709731175762 1004.3512114445095 835.4450090923286 1.195533615756568 1.2868857068739823 1.4286316294027461 1.24154298967689 1.1825522127540908 1.1003978335109912 1.049940221571514 1.3238699995790044 0.9860265656653623 1.2021751288402447 1.0 9.706401059688066 -7.759060111778477 0.49231020943565196 0.9845989778043253 1.3149398327433413 0.18813642599659475 0.11895322120941577 0.500414396284975 0.25204495244378466 0.02950637351786543 0.06305095247696586 1.74156580225783e-08 7.759060111778477 0.330340854939016 KRKS(ph)ELEFETLK ddPTM_A549_MK2206_60min_R1 1 KRKSELEFETLK 12 3 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 KRKS(1)ELEFETLK 121.27 3.9006e-06 35779000.0 4050.1 5101.8 4254.9 4373.8 7130.4 5930.6 5476.0 6076.3 6978.6 6852.0 6055.1 True False 4733.6578645618665 5361.459828450326 4858.3088004518 5445.381196347344 6081.52760558376 6558.17215558633 6470.918317507891 6937.634132888314 5397.958242534236 5304.128441079328 4551.451557741576 1.040032570820264 1.1779670200665995 1.067419643781178 1.1964053944692172 1.3361732028630897 1.4408968375004492 1.4217262856508905 1.5242684767430015 1.185986091261992 1.1653707336635324 1.0 12.152111010453382 -9.720803753318368 1.260647319118408 1.0379673296611789 1.2720245126382177 0.16436345555901122 0.15206957227913478 0.38453456171238215 1.2418467260051338 0.044735528561819976 0.030971439825337177 1.9019375231902023e-10 9.720803753318368 0.2340571829770388 KRKS(ph)ELEFETLK ddPTM_A549_PD325901_60min_R1 2 KRKSELEFETLK 12 3 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 KRKS(1)ELEFETLK;KRKS(1)ELEFETLK 133.28 1.5369e-08 52666000.0 10044.400000000001 10395.0 11451.599999999999 10507.7 11913.2 11739.8 9873.5 12355.6 15195.4 12854.5 12787.099999999999 True False 11064.100093703533 11271.02313125567 12228.774440064943 11156.73676428184 11076.457930308869 11644.194961118283 10249.241445486507 12109.157865219315 14556.790181426919 12042.8646762373 11214.367764105475 0.9866004331619199 1.0050520339926372 1.0904559844386719 0.9948609675519919 0.9877023977902685 1.0383282594306014 0.9139384101787612 1.07978961631505 1.2980482259570392 1.0738781650075402 1.0 13.453060666999871 -8.520207855283505 24.997875339960853 1.1432804649389794 1.0057479635347977 0.3195178342561429 0.07791383974093101 114.63342465505903 1072903.3114388178 0.01852519198588761 0.021193378902763058 3.0185067038106916e-09 8.520207855283505 -0.13753250140418172 KRKS(ph)NEMEEDLVK ddPTM_A549_MK2206_60min_R1 4 KRKSNEMEEDLVK 13 3 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 KRKS(1)NEMEEDLVK;KRKS(1)NEMEEDLVK;KRKS(1)NEMEEDLVK;KRKS(1)NEMEEDLVK 134.44 7.6259e-09 22976800.0 5523.3 5646.5 5570.57 4546.55 7689.4 5806.0 6031.7 5764.7 8666.8 8229.099999999999 7896.700000000001 True False 6455.498008279927 5933.882731848517 6360.560590033323 5660.454954102385 6558.299446086584 6420.387066289113 7127.581814410577 6581.863878653331 6703.78363803567 6370.140594641839 5935.731452167249 1.0875657128866403 0.9996885438073422 1.0715714889208745 0.953623828792936 1.104884797928657 1.081650529176974 1.2007925007807017 1.108854726952003 1.1293946992140271 1.0731854441150601 1.0 12.535210106844751 -5.93811226798091 24.99328284455526 1.0724123907876377 1.0416276781758729 0.03465017539855619 0.06425824950618587 240.63014114724137 97174.29332931984 0.010142234630928806 0.031533482991975795 1.1531551211018847e-06 5.93811226798091 -0.030784712611764853 KRKS(ph)NEMEEDLVK ddPTM_A549_PD325901_60min_R1 4 KRKSNEMEEDLVK 13 3 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 KRKS(1)NEMEEDLVK;KRKS(1)NEMEEDLVK;KRKS(1)NEMEEDLVK;KRKS(1)NEMEEDLVK 63.13399999999999 0.0019652999999999997 23706900.0 6466.4 6605.8 6585.5 6806.400000000001 7889.6 7892.3 6426.5 7307.7 8386.6 7529.7 8815.099999999999 True False 7122.864167687922 7162.493949057113 7032.4316318285455 7226.815869544047 7335.461713642416 7828.02772548373 6671.06397421574 7161.942190720254 8034.140367187109 7054.273456973355 7730.898583522937 0.9213500980169455 0.926476252621231 0.9096525527856423 0.9347963618287201 0.9488498179599295 1.0125637583925635 0.8629092597895347 0.926404882090251 1.0392246490350396 0.9124778162280267 1.0 12.916420396955603 -8.754907552837299 24.999211159915124 1.0185227521092208 0.9308085564248028 0.09870467832445862 0.04693129466909882 81.44335595130914 311707.1676833782 0.0060070121258399885 0.006732729427430494 1.7582978585218607e-09 8.754907552837299 -0.08771419568441807 KRKSEDGT(ph)PAEDGTPAATGGSQPPSMGR ddPTM_A549_PD325901_60min_R1 1 KRKSEDGTPAEDGTPAATGGSQPPSMGR 28 3 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KRKS(0.432)EDGT(0.561)PAEDGT(0.007)PAATGGSQPPSMGR 103.15 6.0286999999999995e-15 9035300.0 612.05 437.09 452.8 501.51 624.65 690.21 546.0 413.5 663.55 870.14 595.23 True False 674.1848654326042 473.9251082674882 483.52973090759474 532.4871336881512 580.7767389255139 684.5891585983962 566.7783287826642 405.2524181155256 635.6633010572823 815.1992119009788 522.0204834738523 1.2914912092072603 0.907866881225987 0.9262658194749066 1.0200502672704472 1.1125554596261444 1.311422023217767 1.0857396342207972 0.7763151656784066 1.21769800454415 1.561623035318712 1.0 9.027962607348348 -6.752149570984725 22.681106597082366 1.0951949566599628 1.0193681571694284 0.02060062500557469 0.21010938511707358 183.27713506937275 447458.7965112143 0.023038249398795032 0.04735130459200675 1.7694994378996065e-07 6.752149570984725 -0.07582679949053439 KRLS(ph)IIGPTSR ddPTM_A549_MK2206_60min_R1 1 KRLSIIGPTSR 11 2 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 KRLS(1)IIGPTSR 55.18600000000001 0.0057506 7132800.0 2586.9 2853.1 2886.5 2399.9 3475.9 2918.0 2299.8 1935.7 3564.6 4166.5 3851.7 True False 3023.505476367273 2998.310603424598 3295.8491039752075 2987.8756077356056 2964.5997144968856 3226.7808231883646 2717.6438909066183 2210.091402832629 2757.22379149651 3225.2847562400752 2895.2165884879237 1.0443106358223617 1.035608394669539 1.1383773901684229 1.0320041753063023 1.0239647445668991 1.1145213922919688 0.9386668692465437 0.7633596089565399 0.9523376601460125 1.1140046548035756 1.0 11.49945556360175 -7.773071420026916 24.872084898792735 0.9548071953387809 1.0634688604826648 0.3063491331346573 0.08323925859983403 182.44242319313634 390104.85712913924 0.011618578295101037 0.01612706048577118 1.6862756933854885e-08 7.773071420026916 0.10866166514388387 KRLS(ph)IIGPTSR ddPTM_A549_PD325901_60min_R1 4 KRLSIIGPTSR 11 2 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 KRLS(1)IIGPTSR;KRLS(1)IIGPTSR;KRLS(0.999)IIGPTS(0.001)R;KRLS(1)IIGPTSR 65.038 0.0019332999999999998 29567100.0 7970.0599999999995 7932.620000000001 8892.27 9145.99 10172.91 11119.060000000001 9905.240000000002 11010.25 10273.189999999999 8993.9 9726.039999999999 True False 8779.174623951927 8601.129726932308 9495.752915763418 9710.917030249642 9458.399896234287 11028.51006187259 10282.189328555303 10790.641926375965 9841.443550280554 8426.023619091426 8529.798738447364 1.0292358463723794 1.0083625640735725 1.1132446622640808 1.1384696553833662 1.1088655414108812 1.2929390716058153 1.2054433690456474 1.2650523485082992 1.1537720703679748 0.9878338138403923 1.0 13.058295986056836 -3.9408253497609995 13.07946621704095 1.1086041701206455 0.5469938598892651 0.0 0.10158514695518504 0.0 0.0 0.0145870122795078 0.0 0.00011459736987204428 3.9408253497609995 -0.5616103102313804 KRLS(ph)QSDEDVIR ddPTM_A549_MK2206_60min_R1 2 KRLSQSDEDVIR 12 2 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 KRLS(0.996)QS(0.004)DEDVIR;KRLS(0.993)QS(0.007)DEDVIR 117.4 7.2004e-06 55103000.0 13177.7 15086.6 14205.3 12364.6 17200.2 13613.5 12600.2 16120.7 18887.1 17572.4 20168.4 True False 15401.773596167217 15854.443499921332 16219.825143495253 15393.927555067985 14670.073364967171 15054.071534090064 14889.493240369415 18405.858592573204 14609.202006501067 13602.782635438169 15160.02966047716 1.0159461387018454 1.0458055726140523 1.0699072169879076 1.015428590829252 0.9676810463776779 0.993010691353505 0.9821546246170584 1.2141043919299221 0.9636657931209645 0.8972794209566225 1.0 13.88798495568256 KRLS(ph)QSDEDVIR ddPTM_A549_PD325901_60min_R1 2 KRLSQSDEDVIR 12 2 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 KRLS(1)QSDEDVIR;KRLS(0.999)QS(0.001)DEDVIR 150.76 9.6415e-13 84605000.0 18241.0 17140.0 19058.699999999997 21257.0 21904.0 20663.0 21043.0 22986.0 22348.0 22867.0 27063.0 True False 20092.81289168553 18584.447952835228 20352.137991273354 22569.996611850278 20365.538604697766 20494.727378795807 21843.80288017144 22527.52619783183 21408.791277263444 21423.17371749337 23734.422566491732 0.8465684317954536 0.7830166460031246 0.8574945497096909 0.950939360273909 0.8580591563853692 0.8635022537995204 0.9203427140043646 0.9491499586611474 0.9020144146033864 0.9026203884875049 1.0 14.53469333049259 -7.020674773378317 0.022555595158958004 1.7555995055731395 3.472497712190438e-12 0.3929357454322694 0.04486529926190149 210.68347664765844 1.3960854375569687 49.87188509978738 58.8226417237636 9.535099440649473e-08 7.020674773378317 -1.755599505569667 KRLS(ph)VELTSSLFR ddPTM_A549_PD325901_60min_R1 2 KRLSVELTSSLFR 13 2 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0;A0A2R8Y7Z0;A0A2R8YG06 A0A2R8Y804 CTNNB1 Catenin beta-1 1 KRLS(0.999)VELTSSLFR;KRLS(0.993)VELT(0.002)S(0.002)S(0.002)LFR 62.165 0.00236 11371200.0 3054.1000000000004 3740.3 3503.1000000000004 3987.3999999999996 3920.3 3300.2 2992.8 3353.3 4307.700000000001 4478.2 3811.3 True False 3364.14998369041 4055.508207583993 3740.8414318515765 4233.692641957556 3644.9516523007965 3273.324265377821 3106.6926417229975 3286.41580088704 4126.662349430271 4195.445687745609 3342.5342618213035 1.0064668662086738 1.2133034069108388 1.1191632273092216 1.2666115917838554 1.0904754796184826 0.9792941549667854 0.9294422729507643 0.9832108045756619 1.2345908900816192 1.2551690900124282 1.0 11.706726633045443 -4.888827594773288 9.31175889732464 1.0993295560085559 0.00010124358695436745 0.05402187059350194 0.11702645529228513 38574.798938543 111587.31837618843 0.016901964623325712 803652.3412516888 1.291731960633325e-05 4.888827594773288 -1.0992283124216016 KRLS(ph)VER ddPTM_A549_MK2206_60min_R1 1 KRLSVER 7 2 P11388;P11388-2;P11388-3;P11388-4;J3KTB7 P11388 TOP2A DNA topoisomerase 2-alpha 1 KRLS(1)VER 57.785 0.011271 205490000.0 3981.5 4388.7 3930.3 3698.0 4937.8 3526.7 4205.1 3963.6 5421.9 6197.0 5977.4 True False 4653.47986167084 4612.066084346687 4487.675639478181 4604.010166009528 4211.456161064109 3899.893053166004 4969.112238303947 4525.452438015918 4193.848306995157 4797.09339599658 4493.0466121524805 1.035707007598014 1.0264897034168954 0.9988046033932139 1.0246967288425008 0.9373275028292062 0.8679841074022789 1.1059560844225025 1.0072124392780144 0.9334085908772741 1.0676705162643394 1.0 12.133478313532654 -6.735933652584444 24.79313820615881 0.9718836067647685 1.020170630149237 0.018468167069798147 0.06282521353680742 335.5534065745896 326176.5207306857 0.008222487235796445 0.017111605455732086 1.8368189337903528e-07 6.735933652584444 0.04828702338446855 KRLS(ph)VER ddPTM_A549_PD325901_60min_R1 3 KRLSVER 7 2 P11388;P11388-2;P11388-3;P11388-4;J3KTB7 P11388 TOP2A DNA topoisomerase 2-alpha 1 KRLS(1)VER;KRLS(1)VER;KRLS(1)VER 70.028 0.0070827 488230000.0 15979.7 14636.300000000001 17271.9 16430.0 18476.800000000003 16111.900000000001 17907.6 16124.9 15793.599999999999 15770.1 16247.9 True False 17601.9473803666 15869.752367099325 18444.074998372096 17444.843784762677 17179.053309499624 15980.690028283412 18589.083517414718 15803.276219760663 15129.849915723442 14774.373194657903 14249.511303924208 1.2352667403772055 1.1137050266930146 1.2943654420831077 1.2242415485475981 1.2055889456902737 1.121490392718412 1.3045418275008087 1.1090398739084169 1.0617802669174201 1.0368336765759225 1.0 13.798624821528948 -8.62015694909884 2.4264822599263773 1.0269136830039487 1.2101223093864555 0.6527761712399616 0.05817097305767106 0.11991314903448566 1.408970468482917 0.010020347916282103 0.011378754609085932 2.3979661646435136e-09 8.62015694909884 0.1832086263825068 KRMS(ph)PKPELTEEQK ddPTM_A549_MK2206_60min_R1 6 KRMSPKPELTEEQK 14 3 P41208 P41208 CETN2 Centrin-2 1 KRMS(0.989)PKPELT(0.011)EEQK;KRMS(0.971)PKPELT(0.029)EEQK;KRMS(0.994)PKPELT(0.006)EEQK;KRMS(0.999)PKPELT(0.001)EEQK;KRMS(1)PKPELTEEQK;KRMS(0.993)PKPELT(0.007)EEQK 105.39 3.7463e-06 53906600.0 10161.0 10948.1 11229.039999999999 9011.74 13302.7 10946.029999999999 11563.1 11056.6 15091.599999999999 13574.3 14021.3 True False 11875.928387401076 11505.311526884043 12821.48672180903 11219.616704552378 11345.890451980136 12104.331629213339 13663.965594809255 12623.90690941739 11673.376696333034 10507.856202239216 10539.424241806404 1.1268099769903182 1.0916451660847168 1.216526294761951 1.0645379147039054 1.0765190006276384 1.148481297602526 1.2964622432228157 1.197779557951803 1.1075914991663982 0.9970047662146507 1.0 13.363508435691669 -9.858122641514 0.9835684485174538 1.015355625430852 1.1487566535478972 0.4288900514321471 0.06557189059087498 0.36264062371313466 0.7184789982964089 0.023757020022438843 0.013716655108825363 1.3863642746846744e-10 9.858122641514 0.13340102811704524 KRMS(ph)PKPELTEEQK ddPTM_A549_PD325901_60min_R1 7 KRMSPKPELTEEQK 14 3 P41208 P41208 CETN2 Centrin-2 1 KRMS(1)PKPELTEEQK;KRMS(1)PKPELTEEQK;KRMS(1)PKPELTEEQK;KRMS(0.978)PKPELT(0.022)EEQK;KRMS(0.999)PKPELT(0.001)EEQK;KRMS(0.969)PKPELT(0.031)EEQK;KRMS(1)PKPELTEEQK 94.569 1.0840999999999998e-05 45913800.0 12854.2 12692.1 13179.5 13029.300000000003 15880.2 13891.699999999997 13617.3 14165.400000000001 14620.999999999998 16039.8 15478.2 True False 14159.148921238106 13761.707809928826 14073.940124771736 13834.090269312732 14764.829535715917 13778.57060097845 14135.513803172473 13882.859984458684 14006.530215897112 15027.0442906306 13574.479524393912 1.0430712202109493 1.013792667718748 1.0367940884569662 1.0191249133679334 1.0876902874384904 1.0150349098996965 1.0413300766169604 1.0227176636504258 1.0318281589159117 1.107007032102142 1.0 13.728609262516768 -10.562953271777824 0.5003537256873012 0.9941392497735394 1.0360095990791516 0.0 0.03737244544336356 1.294200090662316 0.47140628235382015 0.025910744652499474 0.004555805753853626 2.7355630453148042e-11 10.562953271777824 0.041870349305612176 KRNDS(ph)EEEER ddPTM_A549_PD325901_60min_R1 2 KRNDSEEEER 10 2 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 KRNDS(1)EEEER;KRNDS(1)EEEER 59.306000000000004 0.0031061 19443400.0 1629.92 1703.3200000000002 1717.6 1475.93 2126.8 1418.93 1201.78 1444.1399999999999 1738.1 2045.02 2007.1999999999998 True False 1795.3882785163134 1846.8647542020603 1834.1666647678549 1567.0948440197674 1977.4209050616864 1407.374704524742 1247.5143955392487 1415.3354947940868 1665.0537014055649 1915.8970881947027 1760.3271246891402 1.0199174081541036 1.0491599704959396 1.0419464876971398 0.8902293341054458 1.1233258167347069 0.7994961190939287 0.7086832771264318 0.804018454833515 0.9458774326956986 1.0883755986734767 1.0 10.781627836998085 -6.3987129799489555 1.3495444463978696 0.9330351895794182 1.040841009454965 0.14472693242487855 0.11850236627295613 0.8354442932986837 2.849950235404111 0.018415156575535163 0.06832400888038101 3.992887003289616e-07 6.3987129799489555 0.10780581987554672 KRNEDEDSPNK ddPTM_A549_MK2206_60min_R1 1 KRNEDEDSPNK 11 2 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2 H7C2W9 RPL31 60S ribosomal protein L31 0 84.65799999999999 0.00016621 4636300.0 2051.4 1537.0 1208.1 851.88 404.52 205.46 342.14 327.61 296.73 2502.5 2359.2 False True 2397.626168085285 1615.2267349422066 1379.4267460635547 1060.5906382423468 345.0156438644035 227.20164082669 404.30240926810586 374.0497207635469 229.52112878044082 1937.1835119382686 1773.3455293924017 1.3520355330338694 0.9108358795116646 0.7778668754623276 0.5980733143448559 0.19455635585165154 0.12812034488537366 0.22798851242861357 0.2109288430054051 0.12942831781862685 1.0923892043768832 1.0 10.79225795173512 -3.801917685160194 12.685278972084005 0.5526366682252626 0.8395348501818982 0.0 0.4286667168631968 0.0 0.0 0.060834144403053896 0.0 0.0001577910313624245 3.801917685160194 0.28689818195663563 KRNS(ph)EDEAQEAK ddPTM_A549_PD325901_60min_R1 3 KRNSEDEAQEAK 12 2 A2RRP1-2;A2RRP1;H7C007;H0Y5G7 A2RRP1-2 NBAS Neuroblastoma-amplified sequence 1 KRNS(1)EDEAQEAK;KRNS(1)EDEAQEAK;KRNS(1)EDEAQEAK 93.51 8.6755e-05 31844600.0 3912.1 3606.2999999999997 4123.9 3563.2999999999997 4492.4 3838.3 3612.17 4267.9 4080.1000000000004 4500.2 4921.7 True False 4309.253512064195 3910.2155573109485 4403.772653025242 3783.396948158542 4176.8693219386505 3807.0421573843073 3749.6331060052685 4182.77338639722 3908.6275859299494 4216.056603991064 4316.362101226853 0.9983531063900691 0.905905358635119 1.0202509775010637 0.8765244572699716 0.9676827902717999 0.8820024984238972 0.8687021658677566 0.9690506237204559 0.9055374628599829 0.9767615656695532 1.0 12.075600182790017 -10.905967214073412 1.1050435578797504 1.0008173026765004 0.929457660054379 0.1550417627304751 0.04891377898501675 0.6011741749283996 1.278742781848945 0.03361709076409478 0.0076248335166910625 1.241746046425712e-11 10.905967214073412 -0.07135964262212136 KRNS(ph)TQLK ddPTM_A549_MK2206_60min_R1 1 KRNSTQLK 8 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 KRNS(0.979)T(0.021)QLK 70.1 0.0013878 5857600.0 2256.8 2325.5 1873.8 1653.2 2528.5 2179.1 2392.1 2072.1 3190.9 2882.0 3023.8 True False 2637.692666537423 2443.858016986404 2139.5330161194343 2058.2340742149695 2156.5609994836955 2409.690915630487 2826.713606156067 2365.8265205401085 2468.1662448202364 2230.9541983640725 2272.907007365525 1.1604929977292442 1.0752124961852376 0.9413200844496136 0.9055513787168188 0.9488118046603748 1.0601801603944656 1.2436556343906242 1.0408813527669505 1.0859072706546988 0.9815422237401261 1.0 11.150322944287694 -7.3158101436945975 21.80102254395995 1.0596879683725167 1.0009027720479369 0.09905200978541573 0.09090520913653592 161.4529158183028 64737.01636644635 0.014301958421526983 0.02286330238228688 4.832700223351284e-08 7.3158101436945975 -0.05878519632457979 KRNS(ph)TQLK ddPTM_A549_PD325901_60min_R1 2 KRNSTQLK 8 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 KRNS(0.987)T(0.013)QLK;KRNS(0.993)T(0.007)QLK 90.15 0.00054281 16619700.0 4554.1 5023.700000000001 3730.5 3434.2 4697.9 4411.7 3097.8 3485.4 5454.8 5521.5 4192.3 True False 5016.428879448772 5447.064829676682 3983.674163318863 3646.3227343659123 4367.935710875164 4375.772577894474 3215.6884741812028 3415.880962756597 5225.553725577973 5172.8715476949155 3676.6736771792944 1.3643932858619434 1.4815197942330345 1.0834995197003985 0.9917449995625756 1.1880128872971394 1.1901443973813637 0.8746189508578431 0.92906829995781 1.4212721020123176 1.406943341151638 1.0 11.844185420624903 -5.761431142632877 24.999999999995485 1.1421292363274724 1.4229565992747726 0.31077632802825284 0.1712328805724718 0.2286992972400733 672701.9804450336 0.026594295477709595 0.0913903823162869 1.7320836307486253e-06 5.761431142632877 0.28082736294730015 KRPAS(ph)MAVMEGDLVK ddPTM_A549_PD325901_60min_R1 1 KRPASMAVMEGDLVK 15 2 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-2 Q68EM7-3;Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 KRPAS(1)MAVMEGDLVK 60.034 0.019146 6026400.0 1443.0 1639.1 2134.2 1958.8 2514.2 1883.0 1665.6 2112.2 1872.2 1713.6 1969.5 True False 1589.4922977195451 1777.23270942195 2279.0396459871645 2079.7906272424307 2337.6112655191323 1867.665472306661 1728.9853194512925 2070.070514011155 1793.5179447508772 1605.4030035551941 1727.2639856891485 0.9202370401333674 1.0289294075177888 1.3194506832016573 1.2040954043354468 1.3533607398098246 1.0812854825786775 1.0009965666953087 1.1984679418793258 1.0383577493716425 0.929448548025313 1.0 10.754272878090317 -8.756158557199159 0.8461195869019141 1.008083813466242 1.1549499400672076 0.19876525993118244 0.12751422214396707 0.6755336009272443 0.9850561916519481 0.03139706589244055 0.03255258246118324 1.753240291952883e-09 8.756158557199159 0.14686612660096565 KRPASLSTAPS(ph)EK ddPTM_A549_PD325901_60min_R1 1 KRPASLSTAPSEK 13 2 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 KRPAS(0.001)LS(0.001)T(0.001)APS(0.998)EK 42.338 0.017437 3343900.0 1063.3 1108.2 1034.7 890.07 1179.2 1552.0 1233.1 1060.0 1257.7 1428.9 1274.7 True False 1171.2454332399109 1201.591903228238 1104.9209641565556 945.0476024043643 1096.3770600191556 1539.3610265639593 1280.0262952782118 1038.8574684460873 1204.8432427695634 1338.6790101423996 1117.9199809890622 1.047700598573853 1.0748460745510142 0.9883721401767898 0.8453624753788265 0.9807294606624287 1.3769867725255556 1.1450070819431357 0.929277127265383 1.0777544576165436 1.197473014980933 1.0 10.126601210623354 KRPEQQDVS(ph)SPAK ddPTM_A549_MK2206_60min_R1 1 KRPEQQDVSSPAK 13 2 F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;H0Y7R3;E9PCD1;H0Y7J9;H0Y493 F8W9F9 WNK2 Serine/threonine-protein kinase WNK2 1 KRPEQQDVS(0.805)S(0.195)PAK 70.281 0.0005882000000000001 9376300.0 1037.9 777.33 991.56 821.76 1155.6 850.01 618.09 698.15 997.6 1000.9 1112.8 True False 1213.0721457812786 816.8927767551238 1132.1781179759766 1023.0912368902087 985.6127708140633 939.9574940090273 730.3889523134494 797.114900494705 771.6451928398467 774.7959948447605 836.4610482824114 1.4502434372433721 0.9766058783400984 1.3535335809130509 1.2231188039072753 1.1783128130567704 1.1237313392406443 0.8731894375873565 0.9529611715112141 0.9225118066457995 0.9262786311875801 1.0 9.708154549215623 -7.503923623450632 2.7826135083056855 0.9555626690628084 1.2282764404783384 0.6077825844442208 0.11446738443349948 0.14125103182101964 2.2012997257209834 0.016054961775566663 0.025847650892853125 3.133836803378116e-08 7.503923623450632 0.27271377141553 KRPEQQDVS(ph)SPAK ddPTM_A549_PD325901_60min_R1 2 KRPEQQDVSSPAK 13 2 F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;H0Y7R3;E9PCD1;H0Y7J9;H0Y493 F8W9F9 WNK2 Serine/threonine-protein kinase WNK2 1 KRPEQQDVS(0.584)S(0.416)PAK;KRPEQQDVS(0.841)S(0.159)PAK 73.156 0.00027339 14030000.0 2352.2 2493.3 2089.87 1890.3 2692.7 1744.17 2053.04 2451.31 1770.72 2107.06 2600.0 True False 2590.99361240188 2703.4191412371124 2231.7011456092196 2007.0595378172172 2503.5740413107023 1729.9660577977206 2131.169560666595 2402.416699034506 1696.3027962446708 1974.019872006891 2280.216482757952 1.136292817806509 1.185597578861149 0.9787233635421966 0.8802056966931721 1.0979545408261397 0.7586850068311514 0.934634749279997 1.0535914976497107 0.7439218201742714 0.8657159909743694 1.0 11.15495508439209 -5.89297086986366 3.472425991747194 0.9006043506545693 1.1624559909195658 0.43194188896204955 0.1052029424412877 0.1698964587175836 3.9491841658124636 0.01668323515976063 0.060088353058813666 1.2794671210474197e-06 5.89297086986366 0.2618516402649964 KRPEQQDVSS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 KRPEQQDVSSPAK 13 2 F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;H0Y7R3;E9PCD1;H0Y7J9;H0Y493 F8W9F9 WNK2 Serine/threonine-protein kinase WNK2 1 KRPEQQDVS(0.354)S(0.646)PAK 72.898 0.00030169 7728000.0 660.78 1016.5 871.13 877.29 1061.1 918.08 754.04 814.77 1074.4 1598.2 1512.5 True False 772.3035094800597 1068.2355081774574 994.6693330836389 1092.2260893830446 905.0135956306704 1015.2306162278185 891.0393075481459 930.2661426284765 831.0501154642456 1237.1655100018947 1136.9045071236046 0.679303762665174 0.9396000292760899 0.8748925937501787 0.960701697054929 0.7960330792604352 0.8929779149142226 0.7837415560982307 0.8182447486131196 0.7309761816028173 1.0881877081584916 1.0 10.150895366610065 -11.037528232613713 1.3536691888201942 0.9993829188786245 0.8257695643848542 0.4592470060720095 0.08570212912845092 0.3715944747277081 1.2206877803940706 0.05809005419725368 0.013223178462712148 9.17216307058105e-12 11.037528232613713 -0.17361335449377036 KRPEQQDVSS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 KRPEQQDVSSPAK 13 2 F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;H0Y7R3;E9PCD1;H0Y7J9;H0Y493 F8W9F9 WNK2 Serine/threonine-protein kinase WNK2 1 KRPEQQDVS(0.268)S(0.732)PAK;KRPEQQDVS(0.156)S(0.844)PAK 64.675 0.0012019 13313200.0 2080.06 2039.65 2241.15 2313.76 2294.8999999999996 2325.19 1964.47 2082.45 2446.58 2387.57 2411.99 True False 2291.2261599407598 2211.5384636522977 2393.2479161297606 2456.675700269781 2133.714140975204 2306.254423554288 2039.2289808492326 2040.913901099579 2343.758750811132 2236.818422734754 2115.3305208643683 1.0831527921246638 1.0454812814541232 1.1313824920144533 1.1613673021963167 1.0086906608350377 1.0902572438712341 0.9640238065566987 0.9648203346801894 1.107987015595758 1.057432113171961 1.0 11.046667387041238 -6.777713393484059 24.998569590455062 1.0393508431744136 1.102929688658047 0.3297315460589738 0.051577645533713266 293.7300989831305 451199.54519127205 0.00863140334950552 0.01634467209499812 1.6683478519618428e-07 6.777713393484059 0.06357884548363346 KRPES(ph)GSIRK ddPTM_A549_MK2206_60min_R1 1 KRPESGSIRK 10 3 B7ZM87;O75044;A0A075B7E9 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 KRPES(0.5)GS(0.5)IRK 41.54 0.025807999999999998 19125000.0 1962.7 2092.7 1864.9 1487.8 2543.7 1967.9 1464.0 1833.0 2696.0 2610.8 2326.5 True False 2293.9557765920777 2199.2094913555993 2129.370862291138 1852.3110667898795 2169.525099619015 2176.141871813701 1729.9898496770543 2092.833363327071 2085.3603046273333 2021.018466720652 1748.7658418664882 1.3117569669268578 1.2575780237154819 1.2176420715185192 1.059210457137518 1.2406035431841709 1.2443872242444232 0.9892632897212849 1.1967487660288203 1.1924754330754723 1.1556827211146712 1.0 10.772121411317992 -14.999999999999998 0.13889576733213138 0.3544961061589518 1.2633008962427532 0.18654388832285584 0.09254574454999513 48.16348989925895 0.4502062099010337 8.6662232432107 0.2025755240473286 1.000000000000004e-15 14.999999999999998 0.9088047900838014 KRPES(ph)GSIRK ddPTM_A549_PD325901_60min_R1 3 KRPESGSIRK 10 3 B7ZM87;O75044;A0A075B7E9 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 KRPES(0.5)GS(0.5)IRK;KRPES(0.5)GS(0.5)IRK;KRPES(0.5)GS(0.5)IRK 44.61600000000001 0.016138 59111000.0 7423.5 7257.6 7269.4 6501.1 9184.199999999999 7982.6 7975.199999999999 7166.1 8584.8 9331.9 9416.3 True False 8177.128255108139 7869.223422549414 7762.745198453329 6902.658181930648 8539.133475769957 7917.592352222592 8278.70060019689 7023.166513803301 8224.010710446175 8742.682241407982 8258.154794843736 0.9901882997172456 0.9529033565056003 0.9400096500128898 0.8358596264434957 1.0340243901823758 0.958760467552172 1.0024879414183399 0.8504522727266456 0.9958654099800986 1.0586726040624446 1.0 13.011603746002573 -8.946657454121844 24.999996782649397 0.9981765932082363 0.9457631512874364 0.21302598798748162 0.058822072311788175 124.00934202552129 58119.29666372723 0.009205159208845739 0.009798988452782136 1.1306873825917335e-09 8.946657454121844 -0.052413441920799886 KRPLRAPS(ph)PEPAAPR ddPTM_A549_PD325901_60min_R1 1 KRPLRAPSPEPAAPR 15 3 P20749 P20749 BCL3 B-cell lymphoma 3 protein 1 KRPLRAPS(1)PEPAAPR 48.907 0.007707300000000001 4193200.0 1027.0 777.23 1024.1 1235.1 981.64 1663.7 1093.6 937.78 1140.5 1072.7 1097.4 True False 1131.260283962559 842.7298997889218 1093.6015844135773 1311.3893218843805 912.6929928741561 1650.151378797977 1135.217546440882 919.0752422258214 1092.568751195586 1004.9695389318732 962.4267569917604 1.1754248058299195 0.8756301647545909 1.1362959066431482 1.3625861005603854 0.9483246244388963 1.7145734642247736 1.1795365602565027 0.9549560374844087 1.135222751506419 1.0442036566741848 1.0 9.910532942058785 -9.770329657821009 0.662834085451229 1.0127227489891943 1.1760362377879057 0.0684277354049142 0.21624552944836656 1.4052884900576696 1.3006439971797998 0.10338266095874092 0.04982114263638453 1.696955063953667e-10 9.770329657821009 0.16331348879871133 KRPLS(ph)WR ddPTM_A549_MK2206_60min_R1 2 KRPLSWR 7 2 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 KRPLS(1)WR;KRPLS(1)WR 65.305 0.0082485 62144000.0 13580.9 11523.8 7563.2 7912.4 18125.5 13305.8 12792.2 11935.5 19091.8 17209.8 17030.4 True False 15873.023898873655 12110.312197870528 8635.775486986067 9850.938355201135 15459.26296070467 14713.810924324787 15116.377155081156 13627.393675935764 14767.5377833398 13322.094227274807 12801.281664871292 1.2399558352373186 0.9460234150696885 0.6746024119353594 0.7695275061585155 1.2076339983305961 1.1494013888235717 1.180848726777323 1.0645335391167472 1.1535983794391635 1.0406844077052617 1.0 13.644000639695603 -6.763505913734298 24.999993787216006 1.095515526071568 0.8936395272005347 0.31833505639739335 0.1431081517525359 54.02854284130971 653626.4053777202 0.021491076382054036 0.04209853119920706 1.723828617705855e-07 6.763505913734298 -0.20187599887103336 KRPLS(ph)WR ddPTM_A549_PD325901_60min_R1 2 KRPLSWR 7 2 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 KRPLS(1)WR;KRPLS(1)WR 65.305 0.0082485 73384000.0 17377.0 14507.2 14878.0 15791.3 13837.0 14500.4 11418.7 10731.599999999999 21816.0 18308.9 22801.0 True False 19141.10024772871 15729.772657022835 15887.71054868197 16766.69273635561 12865.136855058563 14382.313549992294 11853.2448770524 10517.549819222668 20899.149387183603 17152.87292938357 19996.621547447714 0.9572167079479384 0.7866215110237218 0.7945197397962362 0.83847627443325 0.6433655217473782 0.7192371729327444 0.5927623748305273 0.5259663385770825 1.0451340161433962 0.8577885463643679 1.0 14.287468655126432 -8.787088093728244 24.98664456928276 1.0213133487740789 0.7316493009212345 0.40253301241060213 0.12305674193073719 116.10857495501658 113110.91693485872 0.02033440909360695 0.021651343131894058 1.6327207278332898e-09 8.787088093728244 -0.2896640478528444 KRPQS(ph)PS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KRPQSPSPR 9 2 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 2 KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR 52.928000000000004 0.007250199999999999 21804500.0 2031.39 2112.61 1681.66 1733.82 2229.7200000000003 1940.01 1564.1799999999998 1532.7199999999998 2437.1099999999997 3155.0299999999997 2594.87 True False 2374.238969282814 2220.1328253131123 1920.1446749319066 2158.6059778341387 1901.7311416922232 2145.3005705255864 1848.37125892613 1749.9877537581372 1885.1084762649546 2442.3065317364994 1950.4921642312913 1.2172512214210949 1.1382423708367417 0.9844411119122106 1.1066981028784943 0.975000657047866 1.0998765387868508 0.9476435193240531 0.8972031704868833 0.9664783641968102 1.252148855824313 1.0 10.929622487255598 -2.0000000000004943 0.45986991255204324 0.9786573781918222 6.994512115938289 0.190583570090881 0.09982951051822386 35.83039115499915 0.37402890081446166 0.010729656451441734 205.46579463603155 0.009999999999988619 2.0000000000004943 6.015854737746467 KRPQS(ph)PS(ph)PR ddPTM_A549_PD325901_60min_R1 3 KRPQSPSPR 9 2 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 2 KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR 56.122 0.013433 86743200.0 3891.24 4623.289999999999 4219.75 4239.92 4642.639999999999 4102.7 4373.78 4679.429999999999 4906.139999999999 4445.91 5791.79 True False 4286.275820220514 5012.910873737666 4506.127610418116 4501.810228843027 4316.556982638515 4069.288971445852 4540.226591324249 4586.095097708179 4699.95199736143 4165.194483856251 5079.436547181804 0.8438486789639384 0.9869029423192525 0.8871313911615308 0.8862814186232413 0.8498101989350467 0.8011299941729941 0.893844533571992 0.9028747687088753 0.9252900304403012 0.8200111262669879 1.0 12.310452754952605 -9.580783255206574 0.7214489383909568 0.9911475641832272 0.8806261815514705 0.0 0.06717049990024695 0.37553851744809325 0.42132158351816085 0.017716126441874782 0.01044446073673018 2.625528547739319e-10 9.580783255206574 -0.1105213826317567 KRPQS(ph)PSPR ddPTM_A549_MK2206_60min_R1 4 KRPQSPSPR 9 2 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 KRPQS(0.999)PS(0.001)PR;KRPQS(0.882)PS(0.118)PR;KRPQS(0.994)PS(0.006)PR;KRPQS(0.933)PS(0.067)PR 110.66 7.2382e-05 516961000.0 7389.9 7588.8 8216.0 6720.9 9533.699999999999 7268.7 7949.099999999999 7508.4 10686.699999999999 9262.8 10407.3 True False 8637.134454291432 7975.037505614453 9381.152343066105 8367.520801712664 8131.305359216027 8037.8690094274325 9393.348575182972 8572.73869351062 8266.179513153156 7170.327046706013 7822.880183132221 1.104086251111824 1.0194502943826642 1.1991941744542947 1.0696214956423344 1.0394260386026155 1.0274820553635442 1.2007532207174811 1.095854530917558 1.0566670228411248 0.9165840302867926 1.0 12.933484153179906 -9.558050166883032 0.9904343878729512 1.010605451923961 1.092678603257551 0.33757847630740145 0.06463714282633118 0.46172338671616886 0.9484522969868893 0.016834316771018206 0.011706650235981558 2.766622044710088e-10 9.558050166883032 0.08207315133359017 KRPQS(ph)PSPR ddPTM_A549_PD325901_60min_R1 5 KRPQSPSPR 9 2 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 KRPQS(1)PSPR;KRPQS(0.961)PS(0.039)PR;KRPQS(0.995)PS(0.005)PR;KRPQS(0.971)PS(0.029)PR;KRPQS(0.998)PS(0.002)PR 122.51 2.3097e-05 502127000.0 11629.18 10409.580000000002 10647.82 10656.27 12983.75 12354.830000000002 11565.55 11689.720000000001 11878.45 12299.04 12689.849999999999 True False 12809.765792650162 11286.831839024184 11370.445095743158 11314.4835957549 12071.816191505863 12254.216360710827 12005.683334161791 11456.559364192071 11379.240054922584 11522.476515432701 11129.078897586918 1.1510176098605664 1.014174842580321 1.0216878863360896 1.0166594827724855 1.0847093728595414 1.1010988845957295 1.078767025073831 1.029425657740297 1.0224781547186181 1.0353486233196785 1.0 13.442046571971083 -8.568015291523823 2.410869501994563 1.0100733266727662 1.0629542833329058 0.21791541071446474 0.03949321888730398 0.29232016790640264 3.3960330139228123 0.006929174762004861 0.008009363979564676 2.703863159316828e-09 8.568015291523823 0.05288095666013959 KRPS(ph)EGNYQK ddPTM_A549_MK2206_60min_R1 4 KRPSEGNYQK 10 2 E5RH92;E5RGC1;Q9UKB1-2;Q9UKB1-3;Q9UKB1 E5RH92 FBXW11 F-box/WD repeat-containing protein 11 1 KRPS(1)EGNYQK;KRPS(1)EGNYQK;KRPS(1)EGNYQK;KRPS(1)EGNYQK 150.49 5.5924e-09 89900000.0 14784.5 15918.0 14648.9 13912.7 20890.0 16326.0 13494.6 16188.7 22192.2 22625.4 22093.4 True False 17279.762153678887 16728.158208724817 16726.33429385846 17321.312124564844 17817.108672815677 18053.606483678283 15946.394143068277 18483.497800814475 17165.70213366123 17514.306425977262 16606.99903317993 1.0405108183094856 1.0072956694525492 1.0071858413696602 1.0430127737081065 1.0728674480692153 1.087108299796255 0.9602212965273377 1.112994452753649 1.0336426285908151 1.0546340365881022 1.0 14.019503774276298 -4.819027300652041 16.381269378022857 1.027406367849443 13.119794651453212 0.0 0.04270235277782103 862.785613780172 78181.08016324758 0.005525953975995757 418.8542050828804 1.5169550055235958e-05 4.819027300652041 12.09238828360377 KRPS(ph)EGNYQK ddPTM_A549_PD325901_60min_R1 4 KRPSEGNYQK 10 2 E5RH92;E5RGC1;Q9UKB1-2;Q9UKB1-3;Q9UKB1 E5RH92 FBXW11 F-box/WD repeat-containing protein 11 1 KRPS(1)EGNYQK;KRPS(1)EGNYQK;KRPS(1)EGNYQK;KRPS(1)EGNYQK 164.56 8.3289e-10 141083000.0 27285.4 27166.700000000004 26820.4 28430.4 31244.1 29802.899999999998 29552.500000000004 28247.4 30486.7 31017.300000000003 31996.6 True False 30055.39372155017 29456.13315054193 28640.59362816706 30186.481237876847 29049.622202293525 29560.19506352 30677.136559248524 27683.983447343384 29205.450019355063 29058.862384554457 28061.22104315889 1.0710650714494636 1.0497096012050804 1.020646734656239 1.0757365544232467 1.035223027451815 1.0534179898321476 1.0932217280233918 0.98655662220702 1.0407761648873481 1.0355523139873768 1.0 14.776290166646353 -10.944468721435987 0.25781993314138174 0.9706827187737694 1.0569688410124294 0.1455056475046541 0.028120170289186716 4.828202098566428 0.3806329029190655 0.12934124521852547 0.01736013451372992 1.1364001400255123e-11 10.944468721435987 0.08628612223865995 KRPS(ph)LPSS(ph)PSPGLPK ddPTM_A549_MK2206_60min_R1 3 KRPSLPSSPSPGLPK 15 2 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 KRPS(0.988)LPS(0.166)S(0.63)PS(0.216)PGLPK;KRPS(1)LPS(0.376)S(0.549)PS(0.075)PGLPK;KRPS(0.988)LPS(0.44)S(0.513)PS(0.059)PGLPK 86.727 3.6785999999999996e-05 34833700.0 10108.7 10866.6 10475.199999999999 8603.7 14405.6 10852.1 9918.8 10907.5 14212.800000000001 12920.0 13627.0 True False 11814.801426013306 11419.663524998685 11960.740874401905 10711.606886234764 12286.555322982935 12000.462018959028 11720.917568973196 12453.671527817796 10993.623493177805 10001.363026670302 10243.039813932799 1.1534467932012296 1.114870559173793 1.167694462939864 1.04574492346155 1.199502837650841 1.1715723297917622 1.1442811686653953 1.2158179362807953 1.073277434519394 0.9764057553565532 1.0 13.32235630520752 -9.199589818071964 1.7142467234190908 1.0231853995693028 1.1488097259216674 0.6137421920472041 0.047623000012245315 0.16023112682224946 0.9726776313108562 0.009639304110332269 0.00882588569293174 6.315535518195611e-10 9.199589818071964 0.12562432635236465 KRPS(ph)LPSS(ph)PSPGLPK ddPTM_A549_PD325901_60min_R1 2 KRPSLPSSPSPGLPK 15 2 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 KRPS(0.781)LPS(0.249)S(0.943)PS(0.027)PGLPK;KRPS(0.983)LPS(0.103)S(0.883)PS(0.031)PGLPK 68.49 0.0021484 27681000.0 10516.8 11672.099999999999 10639.599999999999 11246.8 11549.3 12447.4 10850.3 11986.5 12810.900000000001 12574.7 13867.099999999999 True False 11584.457793941036 12655.748830238506 11361.667237112284 11941.48929266396 10738.117010922015 12346.032501322321 11263.214104011986 11747.419854272659 12272.502424104798 11780.731295988277 12161.534610789537 0.9525490133180621 1.0406374882171952 0.9342297333950255 0.9819064513511021 0.8829574025464939 1.0151706093381587 0.9261342802921785 0.9659488074679752 1.009124491017508 0.9686878895642482 1.0 13.570037667186536 -8.738180366076826 8.063907694526538 1.0043154544365178 0.9625944725833552 0.07606579510923916 0.041697859102100276 0.2264819714871415 62.25655473764931 0.006309152629592802 0.007077440371373912 1.8273411486942275e-09 8.738180366076826 -0.04172098185316264 KRPS(ph)LPSSPS(ph)PGLPK ddPTM_A549_PD325901_60min_R1 2 KRPSLPSSPSPGLPK 15 2 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 KRPS(0.825)LPS(0.271)S(0.243)PS(0.662)PGLPK;KRPS(0.829)LPS(0.14)S(0.145)PS(0.886)PGLPK 59.372 0.0021430999999999998 40363000.0 5796.5 6206.200000000001 5790.8 6449.8 6902.1 6361.1 6304.8 6345.9 6852.0 7473.4 7987.6 True False 6384.956412842233 6729.218254660792 6183.798510909227 6848.189497441401 6417.320306952352 6309.297310615984 6544.732614118937 6219.326046237757 6564.034268471859 7001.528248581581 7005.1758375682375 0.9114626900013253 0.9606066158357502 0.8827470793446718 0.9775899500930539 0.9160826873947604 0.9006622327422092 0.934270997027658 0.8878186915571731 0.9370263389063599 0.9994793008667826 1.0 12.774205548994676 -10.165414246400804 0.7783274408741597 0.9973915534670086 0.9230175064495368 0.5289427782254175 0.027653296722820773 0.348932601156633 0.4122031104464978 0.01363751749102188 0.005255350710094755 6.832596176604633e-11 10.165414246400804 -0.07437404701747174 KRPS(ph)LPSSPSPGLPK ddPTM_A549_MK2206_60min_R1 4 KRPSLPSSPSPGLPK 15 2 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 KRPS(0.991)LPS(0.004)S(0.005)PSPGLPK;KRPS(0.971)LPS(0.025)S(0.004)PSPGLPK;KRPS(0.99)LPS(0.005)S(0.005)PSPGLPK;KRPS(0.995)LPS(0.002)S(0.003)PSPGLPK 122.57 8.2185e-08 76053800.0 14879.1 16051.699999999999 15058.8 14728.5 19509.0 17161.9 15382.699999999999 15443.5 20616.199999999997 20534.0 20383.4 True False 17390.328320930937 16868.662967645934 17194.364277478562 18336.9831611875 16639.251943416028 18977.960866852765 18177.53747310603 17632.663418735192 15946.663617306387 15895.355138517645 15321.639226779032 1.135017478452062 1.100969858248785 1.1222274603246365 1.1968029588595375 1.085996850411024 1.238637758398804 1.1863963903637336 1.1508340039698213 1.040793571841513 1.037444812741438 1.0 13.903283035678681 -8.824618718938682 3.38321186414226 1.0170929986772623 1.153343215522466 0.6392856358443718 0.04228059475925296 0.10109102928608793 2.247350994603461 0.007717801576593506 0.008231610995086748 1.49754982617981e-09 8.824618718938682 0.13625021684520378 KRPS(ph)LPSSPSPGLPK ddPTM_A549_PD325901_60min_R1 4 KRPSLPSSPSPGLPK 15 2 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 KRPS(0.99)LPS(0.004)S(0.006)PSPGLPK;KRPS(1)LPSSPSPGLPK;KRPS(0.994)LPS(0.006)S(0.001)PSPGLPK;KRPS(0.996)LPS(0.003)SPSPGLPK 161.86 1.9212e-20 109543500.0 18743.4 19971.0 20171.300000000003 18411.8 23453.2 20154.100000000002 21269.9 22821.2 21234.3 22160.199999999997 24270.6 True False 20646.216169838197 21654.02625823059 21540.245717880665 19549.055069768317 21805.928141147626 19989.971691670547 22079.33768383587 22366.013263114943 20341.89621526735 20761.001190116604 21285.47006400967 0.9699675932808104 1.0173149191966444 1.0119694633524574 0.9184225206669335 1.0244513311462153 0.9391369620476644 1.0372962221383357 1.0507643568996063 0.9556705186258604 0.9753602399986524 1.0 14.377581330205947 KRPS(ph)RSQEEVPPDSDDNK ddPTM_A549_PD325901_60min_R1 2 KRPSRSQEEVPPDSDDNK 18 3 Q27J81;A0A0A0MQU1 Q27J81 INF2 Inverted formin-2 1 KRPS(0.5)RS(0.5)QEEVPPDSDDNK;KRPS(0.5)RS(0.5)QEEVPPDSDDNK 114.07 1.7874000000000002e-10 27817000.0 4508.0 3847.2 4320.7 4743.7 4573.6 4730.2 5000.6 4613.7 4576.5 5300.4 6058.5 True False 4965.6488413858015 4171.417045749574 4613.928684479776 5036.7075752756355 4252.366114063441 4691.678819492814 5190.900569433318 4521.676134122367 4384.165620207449 4965.731839428079 5313.342907995789 0.9345620878173024 0.7850833492173473 0.8683664435691703 0.9479357275616715 0.8003184036295238 0.8829994413559376 0.9769556867150033 0.851004012430276 0.8251237866861433 0.9345777084997456 1.0 12.375404107900517 -10.912121428948963 1.1259977238337149 1.0011138383438933 0.8704305725057906 0.2368951374535576 0.060212601851836134 0.40055084880480385 0.8894553211511675 0.041423682444543634 0.009490553395743319 1.224273843842043e-11 10.912121428948963 -0.13068326583810275 KRPSLPSSPS(ph)PGLPK ddPTM_A549_MK2206_60min_R1 1 KRPSLPSSPSPGLPK 15 2 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 KRPSLPS(0.002)S(0.019)PS(0.978)PGLPK 103.5 1.2501000000000001e-06 11913000.0 2802.1 3025.6 3056.7 2984.2 3375.1 2774.1 3152.8 3247.8 4689.2 3615.6 3871.0 True False 3275.0259752324155 3179.590116617529 3490.1860232534273 3715.3291339658294 2878.6272609679336 3067.6534207014515 3725.6229494957765 3708.185595970354 3627.1036871136835 2798.8334488567434 2909.723865835023 1.1255452841029503 1.0927463440607486 1.1994904617011914 1.2768665706014053 0.9893128673712942 1.0542764750706357 1.2804042999546315 1.2744115135840188 1.2465456704335032 0.9618897111577093 1.0 11.506666531853057 -10.930088051960055 1.2257688076106328 1.0013560713730605 1.1767591899692154 0.3680102881819619 0.09439497771249818 0.46726098282863643 1.2629345922998747 0.06737332645337606 0.01638215497539594 1.1746593719777504e-11 10.930088051960055 0.17540311859615487 KRPSLPSSPS(ph)PGLPK ddPTM_A549_PD325901_60min_R1 2 KRPSLPSSPSPGLPK 15 2 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 KRPS(0.156)LPS(0.156)S(0.156)PS(0.531)PGLPK;KRPS(0.002)LPS(0.006)S(0.012)PS(0.981)PGLPK 55.437 0.0046183 8592400.0 5238.9 5030.5 5824.3 5291.5 7065.0 5249.5 5529.9 5393.6 5450.9 5296.299999999999 5559.7 True False 5770.749271325661 5454.437889541283 6219.572022361095 5618.343937131567 6568.778772926847 5206.749812466178 5740.343370577391 5286.020416802655 5221.817629015361 4961.890714127787 4875.8921458420755 1.1835268497984879 1.1186543357388583 1.275576209712687 1.1522699372919105 1.347195257083031 1.0678558214020877 1.1772908831612443 1.0841134829674846 1.0709460900336514 1.017637504217366 1.0 12.25145049872938 -8.48059448824607 0.7002288497571445 1.018153897098688 1.2048843328808503 0.530904556491468 0.06932223826370035 0.3233060234306806 0.32728032090439435 0.01654717710618212 0.019847942677881206 3.306781595021323e-09 8.48059448824607 0.1867304357821622 KRPYEENR ddPTM_A549_MK2206_60min_R1 2 KRPYEENR 8 2 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0;M0QZV6;M0R203 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 0 ; 47.603 0.012398000000000001 14840700.0 971.83 1132.09 779.23 1115.65 1366.6599999999999 1387.73 915.74 940.79 1623.65 1481.38 1376.83 False True 1135.8511450376914 1189.7085454526493 889.7365311936953 1388.984300083431 1165.626124403554 1534.578667499379 1082.118104469443 1074.1498635485398 1255.895867436265 1146.7352291369082 1034.9251124251186 1.0975201310711988 1.1495600320923993 0.859711026925218 1.3421109251360737 1.1262903087472353 1.4827919905271527 1.0456003931856848 1.0379010526003245 1.213513762839661 1.108036915298912 1.0 10.015310662201454 -4.012213085933215 15.934815409434968 1.1222304564582213 1.1462450909083173 0.0 0.16099138249012168 0.0 0.0 0.020769402617417804 0.0 9.722700638856736e-05 4.012213085933215 0.024014634450095995 KRPYEENR ddPTM_A549_PD325901_60min_R1 1 KRPYEENR 8 2 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0;M0QZV6;M0R203 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 0 40.352 0.033211000000000004 6753600.0 604.69 488.13 482.4 519.87 551.85 625.28 723.75 542.34 693.52 701.78 612.26 False True 666.0776836507498 529.266428192384 515.1385649068543 551.9811891895658 513.0899597791476 620.1879269909235 751.2927023011966 531.5226032425007 664.3737661807652 657.4694910334756 536.955901435917 1.240469993661561 0.98567950697074 0.9593684761249123 1.0279823495997875 0.9555532556901833 1.1550071902225658 1.3991702117289415 0.9898812953188769 1.2372967023997872 1.2244385233038384 1.0 9.068659798670454 -7.278975120218281 24.134422112346655 1.1310951734750334 1.0266772770540022 0.17866370861818404 0.13022149544887462 892.423339581963 1228239.5462342643 0.020748464551019894 0.033218782615567065 5.260474016334719e-08 7.278975120218281 -0.10441789642103116 KRQDCSS(ph)SDTEK ddPTM_A549_PD325901_60min_R1 1 KRQDCSSSDTEK 12 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 KRQDCS(0.273)S(0.36)S(0.36)DT(0.007)EK 49.31 0.0064634 4537800.0 527.88 663.77 580.02 491.77 513.45 397.59 507.0 493.62 436.66 625.28 779.11 True False 581.469988995283 719.7082274010177 619.3836451436019 522.1455160092961 477.3870433063395 394.35215886054453 526.2941624410456 483.7743618626014 418.3086987260539 585.7997140890478 683.2844091852112 0.850992619147658 1.0533069651907327 0.9064799910804224 0.764170101044649 0.6986652071801317 0.5771420415267391 0.7702417256507139 0.7080131719081408 0.6122029027778784 0.8573292558915403 1.0 9.416342398326202 -6.157342277536912 4.128704067123926 0.7737505821856614 0.957186564559857 0.32212171897963027 0.11833272786479017 0.3025992390805894 8.946710282856241 0.022683325273493003 0.06371272874046872 6.960777029190064e-07 6.157342277536912 0.18343598237419556 KRQDCSSS(ph)DTEK ddPTM_A549_PD325901_60min_R1 1 KRQDCSSSDTEK 12 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 KRQDCS(0.059)S(0.124)S(0.797)DT(0.021)EK 48.111999999999995 0.006984999999999999 3249900.0 948.45 831.99 715.59 406.92 491.46 329.57 424.79 410.33 409.29 893.96 681.66 True False 1044.735945788013 902.1047171691587 764.1542405922381 432.054524217628 456.94154504495805 326.8860911885852 440.9556159040073 402.14564625234226 392.0889646443149 837.515213035832 597.8201413987637 1.7475756894767172 1.5089901706196083 1.2782343512285992 0.7227165735947242 0.764346186088375 0.5467967178619072 0.7376058204935536 0.6726866801633893 0.6558644272622123 1.4009484710171125 1.0 9.223567694028281 -5.971058961670883 2.0212529907218264 0.7819411285474359 1.6788742782356876 0.6747240795909022 0.223431640455785 0.10527778579632646 0.8224052372951945 0.023535135076704856 0.10320153880219805 1.0689097496252718e-06 5.971058961670883 0.8969331496882517 KRQS(ph)PEPSPVTLGR ddPTM_A549_MK2206_60min_R1 4 KRQSPEPSPVTLGR 14 2 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 KRQS(0.998)PEPS(0.002)PVTLGR;KRQS(1)PEPSPVTLGR;KRQS(0.986)PEPS(0.012)PVT(0.002)LGR;KRQS(1)PEPSPVTLGR 166.9 5.8129e-21 481199000.0 9078.1 10721.7 10394.2 9836.900000000001 12950.099999999999 10564.2 10357.1 10101.2 15072.4 13899.100000000002 14788.9 True False 10610.26134176417 11267.38873391663 11868.253856414038 12246.94094159522 11045.15744489373 11682.096632051587 12238.851005526101 11533.07603362761 11658.525465676936 10759.283656655813 11116.407977124149 0.95446850849649 1.0135817934267235 1.067633886848798 1.1016994848333683 0.993590507619274 1.0508877198544295 1.1009717375173498 1.0374822566211046 1.0487673257106416 0.9678741261382955 1.0 13.44040306772278 -5.338940584914428 3.4459771722135866 1.037050883369205 0.9502586482104254 0.2791016481471513 0.04006553360685636 0.25130281912803 4.874263045743879 0.005206860419144075 0.0494133828041897 4.582045686103904e-06 5.338940584914428 -0.08679223515877954 KRQS(ph)PEPSPVTLGR ddPTM_A549_PD325901_60min_R1 7 KRQSPEPSPVTLGR 14 2 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 KRQS(0.996)PEPS(0.004)PVTLGR;KRQS(1)PEPSPVTLGR;KRQS(0.991)PEPS(0.008)PVT(0.001)LGR;KRQS(1)PEPSPVTLGR;KRQS(1)PEPSPVTLGR;KRQS(0.999)PEPS(0.001)PVT(0.001)LGR;KRQS(1)PEPSPVTLGR 216.72 2.636e-39 814685000.0 22293.600000000002 21419.6 24534.7 26236.399999999994 27592.4 23979.100000000002 23960.5 26722.600000000002 26697.699999999997 34191.6 31119.100000000002 True False 24556.82986031909 23224.70486409275 26199.772281136404 27856.96284081238 25654.40501261241 23783.822159845276 24872.329939188687 26189.596779525844 25575.68851275262 32032.736540825023 27291.64798022807 0.8997928552394392 0.8509821349344059 0.9599923134036209 1.020713841135349 0.9400093769052792 0.8714688895692887 0.9113531713881073 0.9596194703412331 0.9371251062332839 1.1737193944474045 1.0 14.736171892560863 -14.999999999800083 0.1661098160439474 1.289015952406356 0.9094989655362807 0.350266199192784 0.0676525685416965 56.63063399812109 0.5987996957300834 5.301052295199717 0.0663480709280803 1.0000000004603249e-15 14.999999999800083 -0.3795169868700753 KRQS(ph)SADGSQPPK ddPTM_A549_MK2206_60min_R1 1 KRQSSADGSQPPK 13 2 Q15291;Q15291-2 Q15291 RBBP5 Retinoblastoma-binding protein 5 1 KRQS(0.821)S(0.174)ADGS(0.006)QPPK 47.545 0.007055800000000001 2096000.0 707.59 644.15 684.99 454.45 771.09 684.23 662.23 498.2 825.8 1033.7 1022.0 True False 827.0138930854371 676.934483612897 782.131882117436 565.7902704010356 657.6636824567465 756.6347644448845 782.5486189560355 568.8213756735115 638.7576185316216 800.1864520641706 768.2091942349246 1.0765477675766135 0.8811850843403014 1.0181235631999659 0.7365054657599066 0.8560997282930561 0.9849332318893068 1.0186660415271285 0.7404511426604474 0.8314891611884098 1.0416257161060052 1.0 9.585355420498367 -3.573100221524183 1.6530535302135025 0.9057790612438542 40.17401647876624 0.15944892589349713 0.10642391399980757 458.76149106812005 6.7703484179061455 0.014847484723886688 67431.61615492457 0.0002672389633918644 3.573100221524183 39.268237417522386 KRQS(ph)VSGLHR ddPTM_A549_MK2206_60min_R1 2 KRQSVSGLHR 10 2 Q8N1G4;J3KRP5 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KRQS(1)VSGLHR;KRQS(1)VSGLHR 123.84 5.330499999999999e-06 17245400.0 1529.76 2126.19 1826.01 1546.53 1876.23 1606.4299999999998 1276.4 1798.32 3055.1 3200.1 3742.3 True False 1787.9460889588308 2234.403989308244 2084.9656755065894 1925.4299194263688 1600.2390524268524 1776.4213563380683 1508.3053580107871 2053.2373671240243 2363.1247279921968 2477.1951874340275 2812.983627774322 0.635604868547878 0.7943181635494055 0.7411936759675518 0.6844796039391811 0.5688760633466563 0.6315078903404786 0.536194147423525 0.729914439192303 0.8400776686574387 0.8806290811560906 1.0 11.457885440515009 -9.102731927442504 1.1586332778990265 0.9553047869467048 0.6610205275159395 0.6674268714796195 0.07701061978475952 0.16556822682207809 0.4587642669568926 0.019289080954563845 0.017578107278067426 7.893471996285617e-10 9.102731927442504 -0.2942842594307653 KRQS(ph)VSGLHR ddPTM_A549_PD325901_60min_R1 2 KRQSVSGLHR 10 2 Q8N1G4;J3KRP5 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KRQS(1)VSGLHR;KRQS(1)VSGLHR 131.06 2.3699e-07 31962000.0 2630.9 3153.3 2643.9 3466.2 3996.0 4127.5 2966.2 3872.3999999999996 3717.6 3894.6 4245.9 True False 2897.9870312337835 3419.039657507313 2823.3309530622555 3680.2993016886426 3715.334745451615 4093.887008468262 3079.080364166919 3795.1619441609655 3561.362200302245 3648.694291343407 3723.6812169776886 0.7782586269793319 0.9181880666687047 0.7582096287377149 0.9883497236306773 0.9977585429472269 1.0994193030817632 0.8268915046025456 1.0191962531210699 0.9564089922801745 0.9798621521916571 1.0 11.86251385423681 -6.276884096926533 24.585687843959292 0.9813120303264176 0.8282157055808822 0.5140604486349867 0.07135911298847768 362.24973076508985 576647.3633163623 0.009125756614785105 0.021279548664785222 5.285863003148422e-07 6.276884096926533 -0.15309632474553536 KRRES(ph)ASSSSSVK ddPTM_A549_MK2206_60min_R1 2 KRRESASSSSSVK 13 3 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 KRRES(0.989)AS(0.005)S(0.006)S(0.001)SSVK;KRRES(0.886)AS(0.099)S(0.012)S(0.001)S(0.002)SVK 76.15100000000001 0.00029898 24063000.0 659.13 985.25 783.81 582.83 1274.7 710.49 692.8599999999999 894.8399999999999 1183.04 1255.57 1269.49 True False 770.3750298186861 1035.3950166569996 894.9660440626395 725.6233761642328 1087.193318584879 785.6735802149077 818.7436934748927 1021.6863103325672 915.0833289266767 971.9358649687638 954.2405968584093 0.8073173918139167 1.0850460775466588 0.9378830108560504 0.7604197291051757 1.1393283016507392 0.8233495648807387 0.8580055136727518 1.0706799875169906 0.9589649947186824 1.0185438223532006 1.0 9.898209254885895 -8.25054550941 24.92422192315975 0.9868352481048079 0.9223105990168284 0.1319460645221029 0.11126053911023225 1457.089337297845 3333693.041398365 0.016543616193217224 0.02125110806697274 5.616354218953614e-09 8.25054550941 -0.0645246490879795 KRRES(ph)ASSSSSVK ddPTM_A549_PD325901_60min_R1 2 KRRESASSSSSVK 13 3 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 KRRES(0.838)AS(0.092)S(0.03)S(0.035)S(0.004)S(0.001)VK;KRRES(0.999)AS(0.001)SSSSVK 115.31 5.4824e-06 85518000.0 1483.39 1292.6399999999999 713.9399999999999 1086.9 1112.99 1717.2199999999998 1513.88 1195.1399999999999 1584.51 1319.88 1535.68 True False 1633.9826607859995 1401.5753093204746 762.3922616699821 1154.0353444710004 1034.817422007056 1703.235529662476 1571.4915318269234 1171.3019951308077 1517.918554981953 1236.542551547871 1346.801095477589 1.2132323520323343 1.0406698613676597 0.566076359924277 0.8568714031686825 0.7683520792207995 1.2646526167685452 1.1668326801216753 0.8696918936759941 1.1270547373914068 0.9181330158551593 1.0 10.395321084417743 -7.243864046199577 24.865440716160972 1.0672300374166197 0.8777346635856276 0.17239584163780164 0.18262824129286936 971.3332071949279 1374234.987537499 0.026250546698277057 0.045403256254444975 5.703427874062771e-08 7.243864046199577 -0.18949537383099213 KRRHS(ph)EVETDSK ddPTM_A549_MK2206_60min_R1 2 KRRHSEVETDSK 12 3 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 KRRHS(0.999)EVET(0.001)DSK;KRRHS(0.998)EVET(0.002)DSK 56.599 0.0027982 3720200.0 244.72 266.86 224.16799999999998 122.03 329.39 431.77 244.66 443.12 697.47 1035.3899999999999 1170.24 True False 286.02275317043507 280.44203414878143 255.9583931889537 151.92735547813484 280.9371673402944 477.45961481426974 289.11155506966384 505.9336169980855 539.4941586307219 801.4946798904151 879.6371110190588 0.3251599433305832 0.3188156009287621 0.29098180372634136 0.172715945672332 0.3193784844011742 0.5427915771551899 0.3286713935190028 0.575161746429686 0.6133144587382385 0.9111651496398148 1.0 9.780764661127389 -9.42589037696741 0.3369477988766856 1.0783941639283394 0.23905128975377826 0.8987078791905869 0.08111977655447057 0.28128677277229147 0.07941171771340695 0.08948030615130827 0.04504912783223697 3.750676635125919e-10 9.42589037696741 -0.8393428741745612 down KRRHS(ph)EVETDSK ddPTM_A549_PD325901_60min_R1 3 KRRHSEVETDSK 12 3 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 KRRHS(1)EVETDSK;KRRHS(0.999)EVET(0.001)DSK;KRRHS(0.998)EVET(0.002)DSK 77.75399999999999 0.00030798 6350500.0 939.6700000000001 625.53 657.22 1050.48 800.6500000000001 1454.22 721.51 1186.74 1129.68 1087.52 1091.43 True False 1035.0646066515071 678.2456083977256 701.8229013849146 1115.3657637868218 744.4151060925517 1442.3773144651043 748.9674578754212 1163.0695397204804 1082.2034781680215 1018.8538016026757 957.1910291448131 1.0813563595307292 0.708579152693996 0.7332109056767352 1.1652488686436264 0.7777079845364173 1.5068855333441362 0.7824639336043236 1.2150861262872534 1.130603448232166 1.064420549901052 1.0 9.902663065684841 -6.261486158710786 24.999999999125556 1.0709854110100778 0.8278018373324478 0.2031808476543131 0.20997912790869755 4.501854083137799 2406672.2301960858 0.026106943037663793 0.06450755319762752 5.476635551299285e-07 6.261486158710786 -0.24318357367763 KRRS(ph)PVPR ddPTM_A549_MK2206_60min_R1 1 KRRSPVPR 8 3 Q8TDR2;A0A0C4DGC9 Q8TDR2 STK35 Serine/threonine-protein kinase 35 1 KRRS(1)PVPR 59.757 0.0034924999999999995 13225000.0 230.98 477.44 531.32 432.97 549.93 416.71 422.81 266.73 662.11 671.03 652.52 True False 269.96377708118297 501.73965668887917 606.6691653989637 539.0476694367619 469.03602548786614 460.80597561028884 499.62910405871287 304.5397943263662 512.1431421724049 519.4438569494253 490.48127536416155 0.5504058781464111 1.0229537433745228 1.2368854752886083 1.099017835159032 0.9562771282953193 0.9394975889103206 1.0186507195157644 0.6208999397586754 1.0441645132980057 1.0590493114416248 1.0 8.938054250877949 KRS(ph)DSSGGYNLSDIIQSPSSTGLLK ddPTM_A549_MK2206_60min_R1 2 KRSDSSGGYNLSDIIQSPSSTGLLK 25 2 E9PDR5;Q9P2D0-2;Q9P2D0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 KRS(0.309)DS(0.309)S(0.309)GGY(0.033)NLS(0.039)DIIQSPSSTGLLK;KRS(0.319)DS(0.319)S(0.319)GGY(0.024)NLS(0.02)DIIQSPSSTGLLK 99.34 4.5421e-10 11563800.0 2607.0 2372.8 2363.7 2285.2 3061.8 1792.74 1754.1999999999998 2255.2 2930.6 2647.0 3060.7 True False 3046.9978649694526 2493.565384951769 2698.908202690526 2845.0741025865273 2611.4132759419335 1982.4465568755004 2072.9154332674098 2574.8815062603426 2266.82377920655 2049.0408615786605 2300.643718977332 1.3244110071610242 1.0838555159076058 1.1731100215248575 1.2366426314158727 1.1350793929547436 0.8616921170900488 0.9010154054574123 1.1192004589936737 0.9852997926224687 0.8906380612855117 1.0 11.16782186767551 -7.058036238833328 7.013041287861568 0.987657204011882 1.1928942739817552 0.6379400841510041 0.08621921418099811 0.1272266738829097 13.152606641029292 0.011405957382270354 0.019946651988111918 8.749107670046026e-08 7.058036238833328 0.20523706996987323 KRS(ph)EGFSMDR ddPTM_A549_MK2206_60min_R1 7 KRSEGFSMDR 10 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KRS(1)EGFSMDR;KRS(1)EGFSMDR;KRS(0.999)EGFS(0.001)MDR;KRS(0.995)EGFS(0.005)MDR;KRS(1)EGFSMDR;KRS(0.999)EGFS(0.001)MDR;KRS(0.877)EGFS(0.123)MDR 90.70700000000001 0.00021546 402718400.0 19168.44 21886.17 19187.12 18148.64 35089.69 30157.89 29342.08 31919.350000000002 45832.9 42542.8 44906.2 True False 22403.604048636367 23000.082569609684 21908.142130561177 22595.0576147234 29928.043084031273 33349.17790261277 34673.15612596455 36444.015611409646 35451.82133010167 32932.35193274219 33754.75119192992 0.6637170548598983 0.6813880048716976 0.6490387680830831 0.66938895464664 0.8866320155601225 0.9879847051157019 1.0272081677868863 1.0796706929992916 1.050276481924639 0.9756360444041918 1.0 15.042802964338241 -6.954791031863592 2.049261875027939 1.0283365074739013 0.6595995569122156 0.9700006333746406 0.02906238343432831 0.03644853198469379 0.307621631054766 0.004447066149224516 0.009293982359139448 1.109708641906909e-07 6.954791031863592 -0.36873695056168565 KRS(ph)EGFSMDR ddPTM_A549_PD325901_60min_R1 7 KRSEGFSMDR 10 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KRS(1)EGFSMDR;KRS(1)EGFSMDR;KRS(1)EGFSMDR;KRS(0.956)EGFS(0.044)MDR;KRS(1)EGFSMDR;KRS(0.904)EGFS(0.096)MDR;KRS(1)EGFSMDR 167.09 1.4729e-10 1385573000.0 30129.700000000004 28916.3 32497.100000000002 29551.699999999997 36430.1 32263.1 31750.8 34136.3 35637.7 39050.799999999996 41304.9 True False 33188.44496368717 31353.17808276367 34702.54862693728 31377.041392219773 33871.37545302227 32000.360010396707 32959.09406870443 33455.42471709071 34139.97140244007 36585.12582354879 36224.6591533342 0.9161837747928798 0.8655203062104685 0.9579813706471597 0.866179064912796 0.9350364156540221 0.8833860899820591 0.9098524275740714 0.9235538856412234 0.9424511424090997 1.0099508643735966 1.0 15.144684494725501 -9.596138322686299 0.49883499825453614 1.0011982633804557 0.9009070497453218 0.6608950027765916 0.02677867330904793 0.36507577647542905 0.20047390413748623 0.015101866978270295 0.00717599811193296 2.534321321219675e-10 9.596138322686299 -0.10029121363513394 KRS(ph)ELSQDAEPAGSQETK ddPTM_A549_PD325901_60min_R1 2 KRSELSQDAEPAGSQETK 18 2 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 KRS(0.968)ELS(0.032)QDAEPAGSQETK;KRS(0.907)ELS(0.093)QDAEPAGSQETK 117.31 1.499e-10 10438100.0 2868.0 2519.8 2592.2 2410.14 3069.8999999999996 2289.6 2731.7 2580.5 3270.1000000000004 3873.8999999999996 4035.4 True False 3159.157248689988 2732.1523892388677 2768.1222801648983 2559.0088739749185 2854.280814580058 2270.9542567144604 2835.6563383435955 2529.029903136912 3132.669069079074 3629.301292876092 3539.0713825082476 0.8926514634047865 0.7719969715057028 0.782160623785736 0.7230735403142027 0.806505579030492 0.6416808284621165 0.8012430470769085 0.7146026823975817 0.8851669634475855 1.0254953632226247 1.0 11.78915514564876 -9.232002913604434 1.177809507966739 0.9703031929739591 0.7638011022428481 0.6524406285445774 0.06666810626250581 0.175455413370754 0.5066099132382579 0.015123770283971834 0.013021978908754592 5.861342322305256e-10 9.232002913604434 -0.20650209073111092 KRS(ph)ESPPAELPSLR ddPTM_A549_MK2206_60min_R1 1 KRSESPPAELPSLR 14 2 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 KRS(0.564)ES(0.436)PPAELPSLR 62.765 0.0012173 20174000.0 732.71 698.88 868.28 726.28 1567.0 840.24 788.02 957.49 1459.5 1386.6 1377.8 True False 856.3735349604013 734.4500068421657 991.4151602285102 904.2186326039482 1336.4963757923479 929.1536390938282 931.1930337039022 1093.2171396901454 1128.9255803425795 1073.3660969644761 1035.6542346544807 0.82689135650192 0.7091652621757454 0.957283934207318 0.8730893017645194 1.2904851166260478 0.8971658764122337 0.8991350612442296 1.0555811998923261 1.0900603141155663 1.0364135645354426 1.0 10.016326707367233 -6.084322781119943 1.8446551464724437 1.0347983294630467 0.7705801071539801 0.40398443742310386 0.11356964873951966 0.2454086440835101 1.5731770733780488 0.015568565194531436 0.06368903994566044 8.235258175890945e-07 6.084322781119943 -0.26421822230906666 KRS(ph)FVPEEEKHEER ddPTM_A549_MK2206_60min_R1 4 KRSFVPEEEKHEER 14 3 A0A0U1RRH6;O94880;B4DG57;O94880-2 A0A0U1RRH6 PHF14 PHD finger protein 14 1 KRS(1)FVPEEEKHEER;KRS(1)FVPEEEKHEER;KRS(1)FVPEEEKHEER;KRS(1)FVPEEEKHEER 128.01 2.0999e-09 84585300.0 9748.300000000001 7751.3 6493.7 6017.799999999999 10107.7 6912.4 6915.400000000001 6287.94 10854.9 9100.8 9242.0 True False 11393.574716947332 8145.808061520839 7414.604305035101 7492.161270149304 8620.870719589222 7643.865579920231 8171.838665612496 7179.274751008631 8396.282481713366 7044.922959219894 6946.956333776101 1.6400815219683724 1.1725722273387442 1.067316958505309 1.0784811232686777 1.2409565146788888 1.1003186449806452 1.1763192789741628 1.03344175579498 1.208627502218582 1.0141020931666835 1.0 12.76216531372728 -5.26430672658302 3.603356454480794 1.108023708761562 1.6992084402545293 0.8095657611542009 0.07459916514765716 0.09656844900212756 2.2477871818597754 0.011532000114612502 0.15271137309773575 5.441182259588285e-06 5.26430672658302 0.5911847314929672 KRS(ph)FVPEEEKHEER ddPTM_A549_PD325901_60min_R1 2 KRSFVPEEEKHEER 14 3 A0A0U1RRH6;O94880;B4DG57;O94880-2 A0A0U1RRH6 PHF14 PHD finger protein 14 1 KRS(1)FVPEEEKHEER;KRS(1)FVPEEEKHEER 131.65 1.4899000000000002e-09 60492000.0 5895.2 6019.200000000001 6720.200000000001 6165.799999999999 7797.6 6388.3 5943.6 6189.7 8632.8 11191.9 12656.2 True False 6493.676364183135 6526.459108384234 7176.27318384544 6546.647462452204 7249.923476259642 6336.275802834113 6169.786950462719 6066.241577774283 8269.993437370671 10485.241523978393 11099.567634261999 0.585038677014638 0.5879921924380591 0.6465362814398117 0.5898110339220871 0.6531717013805721 0.5708578938944775 0.5558583139236795 0.5465295385965385 0.7450734758210729 0.9446531495166252 1.0 13.438215859363126 -9.674600979085746 0.7157857203232686 0.9766423310408282 0.5909493938563675 0.9009813181895879 0.04734369473357843 0.13097818844091447 0.14318341140709953 0.02226045302113958 0.012170013022101788 2.1154317628006575e-10 9.674600979085746 -0.38569293718446074 KRS(ph)GEAAV ddPTM_A549_MK2206_60min_R1 1 KRSGEAAV 8 2 F8VZI0;A0A2R8Y891;P08237-2;P08237;P08237-3 F8VZI0 PFKM ATP-dependent 6-phosphofructokinase, muscle type 1 KRS(1)GEAAV 51.727 0.0093921 28403000.0 4976.9 5038.3 5093.9 2698.4 2826.8 2222.1 2002.9 2022.3 3251.4 7274.5 7801.3 True False 5816.879046477356 5294.727949680754 5816.291616400248 3359.5081211357788 2410.9814646393183 2457.241147089399 2366.801004042468 2308.9672180340053 2514.9630914188824 5631.185397640331 5864.021905073301 0.9919606612391472 0.9029174916792145 0.9918604859521826 0.5729017004914794 0.41114810000171387 0.4190368294776489 0.4036139431871516 0.3937514653614076 0.42888023478272547 0.9602940590601255 1.0 12.517674777335994 -6.259793813405814 24.855774901800668 0.624084831656907 0.9563133578035998 0.3869474753155252 0.21095162699771425 156.69745508600832 2366833.55239764 0.0381048566911737 0.09536700291324303 5.498018370226971e-07 6.259793813405814 0.33222852614669285 KRS(ph)GNSDSIER ddPTM_A549_MK2206_60min_R1 1 KRSGNSDSIER 11 2 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 KRS(0.834)GNS(0.109)DS(0.057)IER 64.675 0.0012491 25196000.0 937.98 876.12 1022.6 840.8 1034.4 891.37 859.07 700.02 921.77 1327.4 1190.0 True False 1096.2880925907352 920.7107657889178 1167.6200567209587 1046.796037744946 882.2411302613939 985.6941817564809 1015.1518990178057 799.2499787213391 712.9905667642203 1027.5394180806622 894.4901576708029 1.2256010680379108 1.0293134674465192 1.3053470143946235 1.1702711637104406 0.9863061350598818 1.1019620208266658 1.1348944315510396 0.8935257385084444 0.7970915729478831 1.1487431239671897 1.0 9.804921797756052 -8.260638339576301 23.9992857680991 0.9007056340753135 1.132857150790358 0.2957973142254041 0.11873597295800142 25.13707979707437 753109.261441199 0.01727964192693893 0.02164305905628798 5.4873373486393414e-09 8.260638339576301 0.23215151671504453 KRS(ph)GNSDSIER ddPTM_A549_PD325901_60min_R1 7 KRSGNSDSIER 11 2 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 KRS(1)GNSDSIER;KRS(0.998)GNS(0.002)DS(0.001)IER;KRS(1)GNSDSIER;KRS(0.914)GNS(0.067)DS(0.018)IER;KRS(0.948)GNS(0.052)DSIER;KRS(0.885)GNS(0.061)DS(0.054)IER;KRS(0.948)GNS(0.029)DS(0.024)IER 146.75 6.0388e-12 302097000.0 18238.46 18816.1 17134.109999999997 17623.88 22702.569999999996 19196.64 19052.8 20183.0 19433.54 21178.920000000002 23930.0 True False 20090.015032755375 20401.79878210869 18296.933740373493 18712.467040864463 21108.019802814695 19040.3089284657 19777.864730092217 19780.43423174281 18616.815895755764 19841.6793767829 20986.761704768393 0.9572708412747037 0.9721270517629791 0.8718321577080782 0.8916319394150652 1.0057778374649744 0.9072533055035146 0.942397164856477 0.9425195992599709 0.8870742498365456 0.9454378744041622 1.0 14.357191952902136 -11.033158408145905 1.3328005769455336 0.9999229948744166 0.9263460234121316 0.07728655256828343 0.041095565559731234 0.41992326789705353 1.3315673545538498 0.027611277516648734 0.006229139134269068 9.264918254825994e-12 11.033158408145905 -0.07357697146228503 KRS(ph)ISES(ph)SR ddPTM_A549_MK2206_60min_R1 1 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 2 KRS(0.983)IS(0.016)ES(0.614)S(0.387)R 46.481 0.030129000000000003 17149000.0 1765.1 2122.1 2196.7 1591.8 1945.9 1736.0 1749.1 2136.8 2738.4 3004.3 3403.4 True False 2063.005727448248 2230.105825778044 2508.2250915303434 1981.7910714586185 1659.660687718144 1919.7023677364623 2066.888829282879 2439.697943675549 2118.1567723262197 2325.626543423032 2558.2418509384947 0.8064154398425744 0.8717337748813415 0.9804487760256902 0.7746691622340537 0.648750503049309 0.7503990942186395 0.8079333189411463 0.9536619623279724 0.8279736224114896 0.9090721983810376 1.0 11.320936944759715 -10.664742770545685 0.5020143062106921 1.0338828519369083 0.8164110020234162 0.22705039901812762 0.08967541950937855 1.395277515352783 0.484062701293625 0.1472241679234988 0.022958918304536457 2.16399986556314e-11 10.664742770545685 -0.2174718499134921 KRS(ph)ISESSR ddPTM_A549_MK2206_60min_R1 2 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 1 KRS(0.97)IS(0.026)ES(0.003)S(0.001)R;KRS(0.99)IS(0.003)ES(0.005)S(0.001)R 54.343 0.0065542000000000005 65254000.0 9666.4 10066.1 8461.5 6118.3 8568.5 6463.8 5453.700000000001 5295.7 8965.2 9167.4 9475.0 True False 11297.851999210088 10578.42149421064 9661.467934621942 7617.283774660925 7308.085000623315 7147.795025676813 6444.566696163766 6046.381692401069 6934.596514482552 7096.4779729641905 7122.096003303236 1.5863099843037964 1.4852961107663187 1.356548399535887 1.0695283763555026 1.0261143625744187 1.003608351019371 0.9048693942309636 0.8489609926062146 0.9736735521770948 0.9964030209186785 1.0 12.798086167506561 -6.106898999933232 1.3321324465699766 0.9704186539864055 1.5888459727292552 0.9593976342986166 0.0471446618010325 0.07472861035603592 0.23118087996332098 0.0077675627138040415 0.04054110637186207 7.818096020648429e-07 6.106898999933232 0.6184273187428497 KRS(ph)ISESSR ddPTM_A549_PD325901_60min_R1 2 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 1 KRS(1)ISESSR;KRS(0.997)IS(0.003)ESSR 86.288 0.00039574 92656000.0 11668.900000000001 10096.3 10852.6 10094.7 12409.7 12741.9 11601.9 12121.4 12130.6 13170.5 14445.5 True False 12853.518137809848 10947.150633967933 11589.122697985344 10718.2266922729 11538.085483140881 12638.134190963472 12043.416653303279 11879.629167945657 11620.793067297822 12338.91238230841 12668.795077569239 1.0145809494201758 0.8641035368351986 0.9147770270990087 0.8460336304002641 0.9107484502270987 0.9975798103593883 0.9506363138375152 0.9377078952819403 0.9172768993535179 0.9739610047174175 1.0 13.628991696587052 -7.116710595640734 7.80294238862023 0.9594709970621238 0.9034944370183279 0.24300522264716606 0.045688750736851524 0.32032142289762505 19.612646515265247 0.007078212455593942 0.012296613938586866 7.643449566964431e-08 7.116710595640734 -0.05597656004379592 KRS(ph)NSEVEDVGPTSHNR ddPTM_A549_MK2206_60min_R1 1 KRSNSEVEDVGPTSHNR 17 2 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 KRS(0.5)NS(0.5)EVEDVGPTSHNR 85.23100000000001 1.4909e-05 5304200.0 767.07 797.29 1120.7 1077.3 1054.0 852.57 837.69 822.55 1194.0 1098.5 1208.2 True False 896.5326629390559 837.8686554990711 1279.632111839604 1341.2385483618343 898.9579962253569 942.7883915098362 989.8874297650082 939.1489814537265 923.5609064262006 850.3480870586161 908.1705953763565 0.987185301421835 0.9225894999957014 1.4090217392573798 1.476857492623409 0.9898558715753379 1.03811816448333 1.0899796082417614 1.0341107565418721 1.0169464978586609 0.9363307856341924 1.0 9.826819515909943 KRS(ph)PEGER ddPTM_A549_PD325901_60min_R1 1 KRSPEGER 8 2 Q9NRU3;Q9NRU3-2 Q9NRU3 CNNM1 Metal transporter CNNM1 1 KRS(1)PEGER 40.589 0.03196 12579000.0 1881.6 1528.3 1346.6 1276.1 1458.0 942.21 756.34 898.71 916.62 1615.7 1970.0 True False 2072.6186468392902 1657.0952045693173 1437.9883737636185 1354.9217987666248 1355.5951098269409 934.5369541487295 785.122932585129 880.7845240256441 878.0976490319135 1513.684426262913 1727.702488858911 1.1996386300329895 0.9591322668428709 0.8323124976878172 0.7842332852466426 0.784622999948484 0.5409131260590818 0.45443178883401164 0.5098010390708949 0.5082458668053823 0.8761256269663941 1.0 10.754639090820014 -5.323488851187408 0.9992131444576606 0.7050638185491521 1.4185787954126647 0.49480031977029015 0.16279767964797087 1.6057399759179196 1.3096631013029638 0.03323600403918128 1.194581524309048 4.7480047943083805e-06 5.323488851187408 0.7135149768635126 KRS(ph)PGGSGGASR ddPTM_A549_MK2206_60min_R1 6 KRSPGGSGGASR 12 2 E7ER77;Q7Z2K6 E7ER77 ERMP1 Endoplasmic reticulum metallopeptidase 1 1 KRS(1)PGGSGGASR;KRS(1)PGGSGGASR;KRS(0.961)PGGS(0.027)GGAS(0.012)R;KRS(1)PGGSGGASR;KRS(0.999)PGGS(0.001)GGASR;KRS(0.999)PGGS(0.001)GGASR 118.2 4.1352e-06 785753000.0 19853.2 14332.789999999997 10981.169999999998 8025.0599999999995 14249.949999999999 10324.92 10941.25 11051.52 14341.2 25148.600000000002 23665.999999999996 True False 23203.934795861736 15062.267790704163 12538.465028615774 9991.200060258629 12153.801231794616 11417.496181272787 12929.133499166031 12618.10680386054 11092.941098190466 19467.513793538754 17789.079051627916 1.3043921345516927 0.8467143097734328 0.7048405930529806 0.5616479656570144 0.6832170005272081 0.641826153458346 0.7268017338976781 0.7093175968941366 0.6235815280822717 1.0943519749976738 1.0 14.118704203137037 -5.272816111075843 3.344130839678926 0.7606705441056232 1.369933034303822 0.5214686510579487 0.15207499153648382 0.20031862028679884 3.698070101564049 0.022463653165603954 0.3071186000124913 5.3356076790941475e-06 5.272816111075843 0.6092624901981989 KRS(ph)PGGSGGASR ddPTM_A549_PD325901_60min_R1 6 KRSPGGSGGASR 12 2 E7ER77;Q7Z2K6 E7ER77 ERMP1 Endoplasmic reticulum metallopeptidase 1 1 KRS(0.994)PGGS(0.003)GGAS(0.003)R;KRS(1)PGGSGGASR;KRS(1)PGGSGGASR;KRS(1)PGGSGGASR;KRS(1)PGGSGGASR;KRS(1)PGGSGGASR 108.63 2.2856999999999998e-05 1673909300.0 17073.86 15966.92 12489.47 10977.32 12033.460000000001 9837.3 8456.0 11002.710000000001 10581.18 14690.98 18244.92 True False 18807.185698088586 17312.508384310622 13337.080539484265 11655.364125097436 11188.271282783344 9757.18829034642 8777.797707300744 10783.25231759099 10136.489801644637 13763.389015621673 16000.91050407701 1.1753822192366203 1.0819702028768563 0.833520101002127 0.7284188060502973 0.6992271645999513 0.609789567153713 0.548581138871077 0.6739149197068149 0.6334945626414118 0.8601628646141594 1.0 13.965866381058488 -5.745542989547547 2.670690019371533 0.7627644818015087 1.1645311275302916 0.6093414465513531 0.12260646052798267 0.20785738754176852 2.8846989655625284 0.024021156327904674 0.11762794355658296 1.7966232288634934e-06 5.745542989547547 0.40176664572878296 KRS(ph)PS(ph)PSPTPEAK ddPTM_A549_MK2206_60min_R1 5 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 KRS(0.968)PS(0.652)PS(0.32)PT(0.061)PEAK;KRS(0.996)PS(0.967)PS(0.036)PT(0.002)PEAK;KRS(0.858)PS(0.566)PS(0.563)PT(0.013)PEAK;KRS(0.994)PS(0.947)PS(0.058)PT(0.001)PEAK;KRS(0.959)PS(0.88)PS(0.142)PT(0.019)PEAK 80.738 0.00020929 258797600.0 22813.499999999996 22300.2 21979.7 17109.6 26593.700000000004 21629.100000000002 18807.899999999998 20500.3 30244.3 34128.7 34199.4 True False 26663.861063475495 23435.184928144565 25096.751966271928 21301.45276807913 22681.80195846137 23917.877005765407 22225.051976599076 23406.280304535707 23394.014340222726 26419.002966588436 25706.745124577188 1.0372320935326522 0.9116356354947139 0.9762710854544525 0.8286328224304703 0.8823288148127398 0.9304125002934924 0.8645611052233367 0.9105112370744245 0.9100340874293201 1.027707041033767 1.0 14.64985933356003 -10.584046799110123 0.8459584097212468 1.0006914910589362 0.9135831055974645 0.3169271816687764 0.053336299125769274 0.6572796361950091 0.8308665886250244 0.035616997874566216 0.009525818318722257 2.6058727288030106e-11 10.584046799110123 -0.0871083854614717 KRS(ph)PS(ph)PSPTPEAK ddPTM_A549_PD325901_60min_R1 2 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 KRS(0.982)PS(0.606)PS(0.411)PT(0.001)PEAK;KRS(0.911)PS(0.775)PS(0.311)PT(0.003)PEAK 95.76700000000001 0.00013938 352140000.0 22101.0 21691.7 23299.0 21653.3 25546.0 21373.3 21618.6 22895.7 26019.0 26056.0 27866.0 True False 24344.67725010373 23519.735686027783 24880.210248268657 22990.775162787675 23751.737088915685 21199.24293109504 22441.307653151853 22439.02730217083 24925.511913509814 24410.819713255238 24438.658657128115 0.9961543958552336 0.9623987967591541 1.0180677506624018 0.9407543795813798 0.9718920102019563 0.8674470734469617 0.9182708416202832 0.918177532449227 1.0199214393560712 0.9988608644908277 1.0 14.576877482962441 -8.773260297193785 24.99528182777384 1.009407350801194 0.9486106391079335 0.29885771856518295 0.03887396260077429 192.4818565246731 407000.6228794061 0.007071248877576157 0.007557493863044023 1.6855424818428228e-09 8.773260297193785 -0.06079671169326051 KRS(ph)PSPS(ph)PT(ph)PEAK ddPTM_A549_MK2206_60min_R1 1 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 3 KRS(0.843)PS(0.26)PS(0.898)PT(0.999)PEAK 49.559 0.012347 2663000.0 1518.2 1713.8 1679.2 1450.5 1964.8 1318.9 1803.2 1181.9 2378.4 2629.8 2915.1 True False 1774.4350435736958 1801.025099768349 1917.3358099411655 1805.8725651154195 1675.7805227548213 1458.4651225850348 2130.818099001135 1349.4379444169472 1839.6961975243507 2035.726353524578 2191.2002173329042 0.8098005054661374 0.8219354331575093 0.8750162558284691 0.824147675246902 0.7647774536982093 0.6656010304527336 0.97244335873366 0.6158441997872118 0.8395837965750118 0.929046253930384 1.0 11.097505598910882 -10.098812413059827 0.8547830478411433 0.9881804973544864 0.7985473975685431 0.310496053809202 0.09326085205731946 0.39450917162547483 0.5747576544082836 0.0391267696172551 0.017238141131400538 7.96503313699946e-11 10.098812413059827 -0.18963309978594334 KRS(ph)PSPS(ph)PT(ph)PEAK ddPTM_A549_PD325901_60min_R1 2 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 3 KRS(0.855)PS(0.29)PS(0.874)PT(0.98)PEAK;KRS(0.899)PS(0.552)PS(0.634)PT(0.916)PEAK 57.52 0.0054922 14309700.0 2969.3999999999996 3271.4 3074.2 3597.3 4147.5 3296.3 2932.3 3600.5 3544.1 3476.8999999999996 3725.2 True False 3270.851302043257 3547.092358979299 3282.833698666359 3819.4970509389404 3856.193908098244 3269.456025684783 3043.89028111613 3528.6852029623924 3395.1538019397394 3257.3679406285323 3267.024015988432 1.0011714900276505 1.0857258292624252 1.004839169409394 1.1691058995118402 1.1803384025420331 1.0007444113310613 0.9317012260147732 1.0800916019268365 1.0392191135798987 0.9970443818861925 1.0 11.673761344770192 KRS(ph)PSPS(ph)PTPEAK ddPTM_A549_MK2206_60min_R1 1 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 KRS(0.725)PS(0.406)PS(0.851)PT(0.018)PEAK 52.568999999999996 0.007526000000000001 77095000.0 3868.9 3773.4 3232.0 2014.8 4743.9 3930.5 2922.1 3224.9 4547.0 5490.1 5191.2 True False 4521.875734476531 3965.449942505479 3690.3461992197754 2508.426090447809 4046.07859420633 4346.422901145258 3453.0077457249463 3682.0394508420422 3517.111760066947 4249.882596959955 3902.081770168631 1.158836744285119 1.0162395808363878 0.9457377924349071 0.6428430356392573 1.0369025644563763 1.1138728394606208 0.884914245550452 0.9436089932792261 0.901342403164184 1.0891321215896235 1.0 11.930028295356518 -9.766201766226764 0.0013876379648029794 0.3260988243939759 1.5849016555099296 0.0 0.13558785731360692 3332777.798458251 1779.3049257632401 809997.4046977714 804099.3649021487 1.7131612154678498e-10 9.766201766226764 1.2588028311159536 KRS(ph)PSPS(ph)PTPEAK ddPTM_A549_PD325901_60min_R1 1 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 KRS(0.802)PS(0.396)PS(0.801)PT(0.001)PEAK 92.264 5.6691e-05 154030000.0 9101.2 9822.0 9315.7 10016.0 10430.0 9922.9 8564.5 9456.3 11653.0 10942.0 11553.0 True False 10025.147124050678 10649.734410311992 9947.919421854853 10634.665572013566 9697.432781546635 9842.09119232701 8890.42673417423 9267.686678176153 11163.26493439908 10251.120252626599 10132.054240501006 0.989448623752626 1.0510933081804532 0.9818265068193074 1.0496060640401494 0.9571043098824864 0.9713816131170201 0.8774555014358688 0.9146898011195298 1.1017770601519286 1.0117514187448433 1.0 13.306639084994416 -8.764869910452504 24.999952971366323 1.048061386162285 0.9755428179296077 0.21266820591377567 0.053615894088202776 98.9475299858837 721078.1770800503 0.010678852646982052 0.011594611568572805 1.7184230503838578e-09 8.764869910452504 -0.07251856823267722 KRS(ph)PSPSPTPEAK ddPTM_A549_MK2206_60min_R1 4 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 KRS(0.964)PS(0.032)PS(0.004)PT(0.001)PEAK;KRS(0.836)PS(0.14)PS(0.024)PTPEAK;KRS(0.884)PS(0.112)PS(0.002)PT(0.002)PEAK;KRS(0.86)PS(0.117)PS(0.023)PTPEAK 98.507 3.288e-05 91235000.0 11268.939999999999 11866.06 11082.64 9606.460000000001 12987.36 11614.84 10518.380000000001 11727.529999999999 14067.830000000002 16943.95 16201.0 True False 13170.861572868756 12469.991769959865 12654.325000408737 11960.043131250377 11076.936548251764 12843.914659493194 12429.433493883971 13389.943291554338 10881.488966708288 13116.299926915655 12177.84457514679 1.0815429193232249 1.0239900577651735 1.0391268276025114 0.9821149430383671 0.9095974644690556 1.054695236109825 1.0206595606623718 1.0995331077620474 0.893548024821718 1.0770625167678782 1.0 13.571971184721027 -8.77192856257012 24.999994817976372 0.9497310181463506 1.0221321527151108 0.0 0.06539224760331713 226.32013236203747 539411.1830716062 0.010468313792049539 0.011200706284406023 1.6907190164293091e-09 8.77192856257012 0.07240113456876018 KRS(ph)PSPSPTPEAK ddPTM_A549_PD325901_60min_R1 3 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 KRS(0.933)PS(0.067)PSPTPEAK;KRS(0.965)PS(0.03)PS(0.005)PTPEAK;KRS(0.499)PS(0.499)PS(0.002)PTPEAK 123.42 1.206e-06 99860000.0 15157.1 13508.6 15095.199999999999 15541.1 17479.6 15307.400000000001 13057.199999999999 14609.5 14828.300000000001 16255.6 17849.8 True False 16695.837633932726 14647.017130435821 16119.651046811656 16501.038450601045 16251.893197346377 15182.7416095523 13554.098891174002 14318.102061568967 14205.118117802274 15229.218641801941 15654.387759204958 1.0665276656453961 0.9356493116010371 1.0297209507496146 1.0540839223110625 1.0381685599802573 0.9698713129566294 0.8658338543584394 0.9146382651183379 0.9074208673187812 0.9728402589776779 1.0 13.934279465539221 -7.427539830807903 5.205724385358321 0.9441872912980864 1.0211669029598445 0.47124819769805826 0.04592012622472906 0.2124301253012472 9.073016991700039 0.008044285076419182 0.012908374075681177 3.736458553202135e-08 7.427539830807903 0.07697961166175804 KRS(ph)PTESVNTPVGK ddPTM_A549_MK2206_60min_R1 5 KRSPTESVNTPVGK 14 2 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 KRS(0.901)PT(0.032)ES(0.064)VNT(0.003)PVGK;KRS(0.965)PT(0.03)ES(0.005)VNTPVGK;KRS(0.685)PT(0.132)ES(0.157)VNT(0.026)PVGK;KRS(0.975)PT(0.025)ESVNTPVGK;KRS(0.9)PT(0.088)ES(0.011)VNTPVGK 100.77 1.0128e-05 43171700.0 11519.38 12624.5 12013.779999999999 11392.63 15700.2 11423.609999999999 11502.63 11564.000000000002 17142.699999999997 17439.0 18318.0 True False 13463.569722198621 13267.033126400704 13717.51465385598 14183.824861434585 13390.72137792918 12632.448827821392 13592.508978545608 13203.232413264726 13259.905821266682 13499.517788088493 13769.135048919119 0.9778079504896362 0.9635342437462816 0.9962510066986967 1.0301173465901927 0.9725172518356812 0.9174467955278747 0.9871723191220079 0.9589006401895364 0.9630166146353244 0.9804187220277288 1.0 13.74915031448868 -10.92533196584415 1.214496007315593 0.9998219308679621 0.9733440224466694 0.03418729625958017 0.026681291533409 0.8509261091954988 2.253944904637385 0.018420162698809996 0.004468965520630197 1.1875941076932335e-11 10.92533196584415 -0.026477908421292717 KRS(ph)PTESVNTPVGK ddPTM_A549_PD325901_60min_R1 1 KRSPTESVNTPVGK 14 2 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 KRS(0.978)PT(0.022)ESVNTPVGK 103.17 8.5241e-06 25372000.0 5394.2 4938.4 5851.0 6030.2 6558.8 5833.5 5749.2 5648.2 6022.5 7620.3 6665.7 True False 5941.815212999844 5354.576299316305 6248.084044921233 6402.671758422142 6098.132514631652 5785.9939100907595 5967.9889520829565 5535.542220072814 5769.395268807905 7139.152957511467 5845.861157353725 1.0164140154997379 0.915960224710535 1.0688047281214568 1.0952486872473846 1.0431538400395612 0.9897590370945338 1.020891326605594 0.9469164715124052 0.9869196536681973 1.221232041840553 1.0 12.513199849355841 -7.2763308998044085 22.90655324000442 0.9917721235473688 1.0277087838851915 0.0 0.08241330794754749 444.0124362418761 682990.8595353693 0.0069025655830138935 0.01106809956113485 5.29260033798621e-08 7.2763308998044085 0.03593666033782272 KRS(ph)SISK ddPTM_A549_MK2206_60min_R1 1 KRSSISK 7 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 KRS(0.5)S(0.5)IS(0.001)K 47.938 0.019128 6269700.0 3253.7 3142.4 2181.6 2028.8 3693.8 3015.6 2925.4 3084.4 4049.0 3942.5 4080.2 True False 3802.845014672462 3302.334737724391 2490.983684473346 2525.8560910762912 3150.4469131472706 3334.7087904067275 3456.9073130090537 3521.62314557884 3131.9079649243577 3051.8865118148333 3066.973732208746 1.2399340022823617 1.0767404699440137 0.8121959631781429 0.8235662616051305 1.0272167903043663 1.0872961693105754 1.1271395241195916 1.1482404001688886 1.02117208635786 0.9950807467845356 1.0 11.58260009503146 -6.971165946047778 24.998976329138525 1.0371804344995748 0.9748143824190811 0.053247107333572075 0.11922006419237036 570.3069200536254 494450.5201279878 0.018125474967762425 0.034253548144573945 1.0686464661526554e-07 6.971165946047778 -0.06236605208049362 KRS(ph)SITEPEGPGGPNIQK ddPTM_A549_PD325901_60min_R1 1 KRSSITEPEGPGGPNIQK 18 2 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 KRS(0.489)S(0.489)IT(0.022)EPEGPGGPNIQK 178.32 1.4649e-31 12857000.0 3436.1 3724.0 3314.8 4932.0 4779.7 4468.9 4434.4 4258.8 5736.5 4588.2 4450.6 True False 3784.930342476876 4037.8345493791385 3539.7622615116925 5236.638438615309 4443.990361069843 4432.506760059074 4603.153518596786 4173.854893036029 5495.414854216109 4298.500268972889 3903.2044146779035 0.9696982121263593 1.0344922070171272 0.9068862107760752 1.3416254652006079 1.1385492249287092 1.135607129206644 1.1793267862904493 1.0693405852228368 1.407923918499051 1.1012746995285425 1.0 11.930443304784493 -6.246455508963307 24.88030991602937 1.1867643206166523 0.9767722023392004 0.37837430872030053 0.1136717983830035 785.7723428248589 1304751.0813374869 0.0209895817213747 0.05529692646752495 5.669496493637107e-07 6.246455508963307 -0.2099921182774519 KRS(ph)SITEPEGPNGPNIQK ddPTM_A549_MK2206_60min_R1 3 KRSSITEPEGPNGPNIQK 18 2 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KRS(0.493)S(0.493)IT(0.013)EPEGPNGPNIQK;KRS(0.498)S(0.498)IT(0.005)EPEGPNGPNIQK;KRS(0.482)S(0.482)IT(0.036)EPEGPNGPNIQK 155.87 3.0609e-23 32525000.0 3434.9 5086.5 3425.8199999999997 3268.34 5398.5 3602.34 3779.44 3107.5099999999998 5597.200000000001 5948.200000000001 6501.9 True False 4014.627144757795 5345.381123801911 3911.6527896692683 4069.083446721359 4604.387801349706 3983.5372277602364 4466.115326136232 3548.009058850247 4329.443136891732 4604.497488795688 4887.2987866889025 0.8214409063125166 1.0937291450976245 0.8003711171338831 0.8325833194000655 0.9421130162719464 0.815079536084399 0.9138208079891065 0.7259652445464643 0.8858560374257142 0.9421354596401073 1.0 12.254821591599375 -10.281851918554297 0.9771076110504473 0.9915327856408934 0.8733191769667863 0.14268659513678073 0.0918088426439157 0.5714604420580844 1.06994797279746 0.03885579452959941 0.01617729748273202 5.2257434086580013e-11 10.281851918554297 -0.11821360867410713 KRS(ph)SITEPEGPNGPNIQK ddPTM_A549_PD325901_60min_R1 3 KRSSITEPEGPNGPNIQK 18 2 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KRS(0.495)S(0.495)IT(0.01)EPEGPNGPNIQK;KRS(0.494)S(0.494)IT(0.013)EPEGPNGPNIQK;KRS(0.498)S(0.498)IT(0.003)EPEGPNGPNIQK 220.04 4.8046000000000004e-57 76065100.0 6402.500000000001 6309.5 7152.8 8203.199999999999 8245.7 8397.0 8056.2 8034.200000000001 8492.199999999999 7526.700000000001 9323.7 True False 7052.477086728618 6841.223708192179 7638.23202128057 8709.893033181077 7666.550478120721 8328.61761601648 8362.783099521797 7873.951578292024 8135.302366420997 7051.46287748534 8176.944007803977 0.8624832308987097 0.8366479826281062 0.9341181759335435 1.0651770422872482 0.937581383803516 1.0185489356497668 1.0227272060980799 0.9629455173934443 0.9949074322456852 0.8623591981008442 1.0 12.997346046099004 -5.948793706001951 4.174996830107778 0.9978777663858954 0.8516826144944684 0.4784909426387537 0.0516771038431681 0.061694082165886954 2.2628305821609405 0.003853795116094387 0.01272710772760082 1.1251392988907367e-06 5.948793706001951 -0.14619515189142707 KRS(ph)SQDKYEK ddPTM_A549_PD325901_60min_R1 1 KRSSQDKYEK 10 3 A0A087WTY1;P0DPB5 A0A087WTY1 POLR1D 1 KRS(0.5)S(0.5)QDKYEK 41.052 0.027342 2299600.0 846.16 1016.8 794.17 754.51 798.19 710.33 935.93 1173.0 942.7 1022.2 977.9 True False 932.061540289931 1102.4893044599107 848.0671519321654 801.1143690834624 742.1278880060124 704.5453079891606 971.5473283105468 1149.603594799302 903.0815973275567 957.6581175502563 857.6244994188474 1.086794443164257 1.2855151703420216 0.9888560232442539 0.9341085400735659 0.8653296267875987 0.8215079075592897 1.132835324747482 1.3404509730987262 1.053003497380861 1.1166403457447807 1.0 9.74420230905598 -2.0000000047896687 0.00524832685867395 7.6861304258802e-10 2.1686977855980754 0.0 0.154718060964932 231421.21789628593 91.42443999845113 17435.6473427632 20456.688524518566 0.009999999889713803 2.0000000047896687 2.168697784829462 KRS(ph)SSEDAESLAPR ddPTM_A549_MK2206_60min_R1 1 KRSSSEDAESLAPR 14 2 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 KRS(0.97)S(0.026)S(0.004)EDAESLAPR 116.6 7.5428e-15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KRS(ph)SSEDAESLAPR ddPTM_A549_PD325901_60min_R1 2 KRSSSEDAESLAPR 14 2 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 KRS(0.933)S(0.054)S(0.013)EDAESLAPR;KRS(0.949)S(0.046)S(0.005)EDAESLAPR 109.87 4.0413e-06 245840000.0 6701.6 6931.9 6466.7 8387.6 7441.5 8303.0 7323.5 8195.599999999999 8059.299999999999 9236.099999999999 9128.5 True False 7381.941498542828 7516.075540505168 6905.569149426109 8905.68300237829 6918.834711781335 8235.38312085088 7602.199800072974 8032.132328676173 7720.595647970701 8652.931069757315 8005.752370329222 0.922079669351459 0.9388343771862235 0.862575911668141 1.1124105006525526 0.8642329155000844 1.0286832192527853 0.9495921742780994 1.0032951254456384 0.9643810213996421 1.08083921029417 1.0 12.966821276402634 KRS(ph)VAVS(ph)DEEEVEEEAER ddPTM_A549_MK2206_60min_R1 3 KRSVAVSDEEEVEEEAER 18 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 2 KRS(1)VAVS(1)DEEEVEEEAER;KRS(1)VAVS(1)DEEEVEEEAER;KRS(1)VAVS(1)DEEEVEEEAER 97.97399999999999 4.2641000000000007e-07 59741000.0 7281.8 7555.000000000001 6296.2 5808.840000000001 8593.2 6717.9 5906.17 6205.799999999999 9204.2 7779.000000000001 7637.700000000001 True False 8510.78981708268 7939.517229985929 7189.095835249861 7232.006060768741 7329.15166334321 7428.7837190188875 6979.244638297214 7085.491154465429 7119.463396087129 6021.718497249868 5741.048300203607 1.4824452559963384 1.3829385880108955 1.2522270253317498 1.2597013093431486 1.276622540012994 1.2939768715681115 1.2156742590111451 1.2341807251846568 1.2400981534739284 1.0488883183644888 1.0 12.487098477907761 -14.999999999999845 0.08878164074641856 0.03242603207899263 1.545603987924264 0.8381258857500928 0.05125983935437643 37.56216755051981 0.24375643011517814 6.944777355809464 0.5661823185674534 1.0000000000003559e-15 14.999999999999845 1.5131779558452714 KRS(ph)VQEGENPDDGVR ddPTM_A549_MK2206_60min_R1 6 KRSVQEGENPDDGVR 15 2 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR 177.02 2.5612999999999998e-28 536981000.0 13658.7 15502.4 12552.2 12054.98 20329.1 15389.000000000002 15583.8 15362.900000000001 23006.8 24418.7 24462.8 True False 15963.954636846282 16291.405943895938 14332.290706016838 15008.450641168622 17338.71631979592 17017.45376560854 18415.174740025454 17540.638121908043 17795.796534310146 18902.498710476317 18388.01162106665 0.8681718809964645 0.8859797502646405 0.7794366787106398 0.8162084596451877 0.942935901776972 0.9254645970591026 1.0014772189358248 0.9539170674556354 0.9677934135043716 1.0279794846779535 1.0 14.166477862588064 -7.013559760711104 1.9999170836040998 0.9807356495857348 0.8372330720122986 0.759337544884839 0.037079214014749104 0.11306581635888634 0.9001411207385965 0.005314127064485719 0.010864809733836944 9.692598859673016e-08 7.013559760711104 -0.1435025775734362 KRS(ph)VQEGENPDDGVR ddPTM_A549_PD325901_60min_R1 4 KRSVQEGENPDDGVR 15 2 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR 233.31 2.0766999999999998e-55 896300000.0 13623.3 14963.0 14283.499999999998 14526.7 16765.5 15138.5 14588.9 16070.199999999999 16693.2 18829.0 18050.5 True False 15006.327387056606 16223.984522653069 15252.864203663043 15423.981266470602 15587.949117835109 15015.217075153685 15144.088572852392 15749.667254171985 15991.642856166718 17640.13372662275 15830.402931547096 0.947943488990526 1.0248623861823274 0.9635171176386721 0.9743265116602579 0.9846842929544881 0.9485050469076252 0.9566458060693449 0.9948999606817196 1.010185459291014 1.1143199451650843 1.0 13.950410356436214 -8.464295812618351 5.88893003851061 1.0047245653506789 0.9730323640110428 0.2740189718385273 0.03870558771974782 0.17853933462846586 13.108656493222536 0.0032032029043093223 0.003852275532304782 3.4332401867254036e-09 8.464295812618351 -0.03169220133963613 KRS(ph)WSSEEESNQATGTSR ddPTM_A549_MK2206_60min_R1 2 KRSWSSEEESNQATGTSR 18 2 F6UZG9;Q8NFZ0;Q8NFZ0-2 F6UZG9 FBXO18 F-box only protein 18 1 KRS(0.997)WS(0.003)SEEESNQATGTSR;KRS(0.999)WS(0.001)SEEESNQATGTSR 143.31 3.5396e-17 18033000.0 2537.3 2718.1 1936.19 1526.88 2899.2 2654.1 1926.0 2371.8 3867.0 3639.4 3331.5 True False 2965.534208970843 2856.4396800562204 2210.770856270834 1900.9656685442474 2472.731520547017 2934.955100351007 2275.9292694521887 2708.009913332866 2991.1306743300815 2817.2570123269265 2504.1966052775456 1.184225792304421 1.1406611102484243 0.882826392948412 0.7591119900641983 0.9874350581483035 1.1720146469992196 0.9088460804777516 1.0813887007217355 1.1944472203286003 1.1250143085369624 1.0 11.290132117828882 -8.489341169236994 23.669340842792707 1.0942483896256778 1.0013445217972563 0.1114572395030341 0.1290963875697065 666.8626538154424 470642.7208196664 0.02360074709205077 0.02851920124036514 3.240849255395441e-09 8.489341169236994 -0.09290386782842153 KRS(ph)WSSEEESNQATGTSR ddPTM_A549_PD325901_60min_R1 2 KRSWSSEEESNQATGTSR 18 2 F6UZG9;Q8NFZ0;Q8NFZ0-2 F6UZG9 FBXO18 F-box only protein 18 1 KRS(0.997)WS(0.003)S(0.001)EEESNQATGTSR;KRS(0.992)WS(0.008)SEEESNQATGTSR 111.67 5.7566e-10 19530700.0 2551.0 2309.95 2037.4 2292.2 1967.3 2419.9900000000002 1938.28 2362.52 4318.5 4413.8 4293.799999999999 True False 2809.9756420530575 2504.6175932702313 2175.6702158814787 2433.7839880360925 1829.1236348165583 2400.2824037851274 2012.0423060675143 2315.3976852389137 4137.008462988284 4135.111914736179 3765.6898206408073 0.7462047528850595 0.6651152146259408 0.5777613981788986 0.6463049544590307 0.4857340147323383 0.6374084213278808 0.5343090912690003 0.6148668094083497 1.0986057429138678 1.09810210391479 1.0 11.878698454913536 -8.756811832145635 24.990802320116362 1.0465638346759227 0.6089915234544293 0.8926362846501502 0.06973302660127428 24.7425506517458 133620.570737411 0.012192636973322171 0.013602026996562681 1.750605013336585e-09 8.756811832145635 -0.4375723112214934 KRS(ph)Y(ph)SPDGK ddPTM_A549_MK2206_60min_R1 2 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 KRS(0.956)Y(0.719)S(0.325)PDGK;KRS(0.997)Y(0.644)S(0.358)PDGK 66.289 0.0031355 32658100.0 4857.0 5377.0 4844.3 3866.5899999999997 5871.1 4370.900000000001 4596.24 4678.2699999999995 5388.25 7020.200000000001 5886.1 True False 5676.742857750915 5650.666332976084 5531.294583193177 4813.904723577823 5007.468967399141 4833.4257368314 5431.31731330578 5341.429099100997 4167.819978267146 5434.33194425935 4424.418921904296 1.2830482280162592 1.2771544541139435 1.2501742445338955 1.0880309501763656 1.131780027114588 1.0924430579803832 1.2275775438931782 1.2072611552800279 0.9420039222853002 1.2282589058995301 1.0 12.111272276912043 -7.333143563244519 0.3374544714182444 0.9566818841339184 1.3205177131617392 0.0 0.1100631354814059 1.0234175745761394 0.21654587825916993 0.04151286570516837 0.1349329022813057 4.643617473707213e-08 7.333143563244519 0.36383582902782075 KRS(ph)Y(ph)SPDGK ddPTM_A549_PD325901_60min_R1 1 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 KRS(0.995)Y(0.663)S(0.342)PDGK 63.537 0.0038546999999999995 16002000.0 2856.6 3198.0 2735.5 2728.0 3448.4 2940.7 2866.6 2953.2 3267.2 3686.4 3911.1 True False 3146.5999290822283 3467.5066833819774 2921.1474798978024 2896.5023642624824 3206.1962803341726 2916.751914185979 2975.690031663709 2894.296109259417 3129.89094599405 3453.640074875041 3430.059494505625 0.917360160697664 1.0109173584121023 0.8516317237578492 0.8444466834765371 0.9347348888466677 0.8503502399471852 0.8675330665343446 0.8438034716003001 0.9124888215518144 1.0068746855286879 1.0 11.744017884874705 -10.101223466080286 0.8665764412496936 0.9931019307416712 0.8918044310692516 0.42820480863178245 0.048742920219149985 0.4190361108327121 0.6276920287748174 0.022273570333723472 0.009894919126794716 7.920936540800295e-11 10.101223466080286 -0.10129749967241963 KRS(ph)Y(ph)SPDGKESPSDK ddPTM_A549_PD325901_60min_R1 3 KRSYSPDGKESPSDK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 KRS(0.902)Y(0.587)S(0.501)PDGKES(0.008)PS(0.002)DK;KRS(0.634)Y(0.602)S(0.643)PDGKES(0.066)PS(0.056)DK;KRS(0.644)Y(0.683)S(0.641)PDGKES(0.031)PS(0.002)DK 44.816 0.022039 24538000.0 3006.01 3625.8 3124.98 3687.5 3499.6 3286.3 3062.41 3453.5999999999995 3444.4000000000005 4582.1 3906.9 True False 3311.177922292399 3931.3588907462076 3337.0599348313062 3915.2685000798733 3253.800168964586 3259.537462369292 3178.9516883650535 3384.7152387032097 3299.6438462236524 4292.785424013925 3426.376067879635 0.9663790128972841 1.147381026735654 0.973932769994042 1.1426849891882367 0.9496331122164752 0.951307561632139 0.9277883178574451 0.9878411393404909 0.9630127519147632 1.2528646415250195 1.0 11.742467790284106 -6.7927733100298555 24.999898250579538 0.9740553179495438 1.0580320671612793 0.005233535903897524 0.10117341096620248 153.10262360697234 122153.12073387323 0.007292393704095319 0.013782173087586369 1.6114865680784225e-07 6.7927733100298555 0.08397674921173548 KRS(ph)YS(ph)PDGK ddPTM_A549_MK2206_60min_R1 1 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 KRS(0.972)Y(0.15)S(0.878)PDGK 45.28 0.04025 29717000.0 4919.8 4111.8 4763.3 4236.4 5020.1 4038.1 4128.5 4654.2 6386.3 6274.4 5710.5 True False 5750.141962438326 4321.073057082215 5438.807565205306 5274.318190179225 4281.64994008626 4465.409061726157 4878.595009830406 5313.947102889715 4939.8132468254935 4857.008682239949 4292.425248217745 1.3396021199963444 1.0066740379174606 1.2670710031499206 1.2287501552576066 0.9974896923048435 1.0402997847382984 1.1365591076643777 1.237982444795309 1.1508210303432889 1.1315301726585976 1.0 12.067577294844163 -14.99999999186686 0.22724916336880263 0.1573401368117533 1.1695077528976963 0.026360797179173057 0.111830041329253 49.39544830920314 0.6154182108262896 18.57153811674649 0.06460984454712082 1.000000018727248e-15 14.99999999186686 1.012167616085943 KRS(ph)YS(ph)PDGK ddPTM_A549_PD325901_60min_R1 2 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 KRS(0.984)Y(0.08)S(0.935)PDGK;KRS(0.881)Y(0.238)S(0.881)PDGK 72.265 0.00086306 49547300.0 10332.2 9672.3 9726.9 9542.6 10838.7 9006.0 10281.1 9730.2 9700.7 11822.3 12525.0 True False 11381.117337836376 10487.418665939807 10387.02592660133 10132.024729182976 10077.427103485094 8932.658121929788 10672.352886533787 9536.123527805765 9293.01331409296 11075.83796039366 10984.504402516679 1.036106584401644 0.9547466395968686 0.9456071522190425 0.922392522949111 0.9174221006435426 0.8132053841121144 0.9715825580704965 0.8681432660376491 0.8460111602271123 1.0083147636461463 1.0 13.423182159446208 -4.947924263477414 1.0859876491804767 0.9158912643465235 1.1704798862793138 0.255112617480035 0.0578108503271919 3.540285555024216 2.1104126703046022 0.009550869473074045 1.2142641981770035 1.1273940450418642e-05 4.947924263477414 0.2545886219327903 KRS(ph)YSPDGK ddPTM_A549_MK2206_60min_R1 2 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 KRS(0.978)YS(0.022)PDGK;KRS(0.959)Y(0.019)S(0.022)PDGK 64.55 0.0020431 9978300.0 3006.1 2755.33 2039.98 1904.3500000000001 2676.31 1710.6799999999998 1712.3600000000001 1888.7199999999998 2527.07 2640.39 2697.5 True False 3513.456187911265 2895.564528034033 2329.279838949366 2370.9158354895217 2282.628344286419 1891.7030221425196 2023.4736468531423 2156.451843962413 1954.6926799015557 2043.9240651695038 2027.6363027873872 1.7327842192810043 1.4280492631018231 1.148766095649062 1.169300348504428 1.125758273882005 0.9329597322468529 0.997947040142987 1.0635299047457099 0.9640252925115042 1.0080328816167505 1.0 10.985583183936125 -2.6355569045967675 0.5082110094668847 0.9839578936012446 13.849440296567886 0.9499666829392551 0.051020121246772854 6.500157623602225 0.11861083955220608 0.009106876487223265 84.96442115298973 0.002314424912428953 2.6355569045967675 12.865482402966641 up KRS(ph)YSPDGK ddPTM_A549_PD325901_60min_R1 2 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 KRS(0.999)YS(0.001)PDGK;KRS(0.999)YS(0.001)PDGK 75.479 0.0006793999999999999 14179700.0 3679.7 3724.2 3167.8 3543.8 4092.2000000000003 3335.3 3991.7 4736.4 5691.3 6677.1 7067.200000000001 True False 4053.2604351480313 4038.0514040810353 3382.7859575288808 3762.6924774462545 3804.777989323603 3308.138422615192 4143.606327842054 4641.9287863660775 5452.1144530288775 6255.506766478984 6197.979202671928 0.6539648331508896 0.6515109638219252 0.5457885299244911 0.6070837533343401 0.6138739522848634 0.5337446794253625 0.6685415023747998 0.7489422978968625 0.8796600109078277 1.009281664543543 1.0 12.597582198629066 -8.677932392051662 1.0813660717849483 0.9628613985712053 0.5985957138976332 0.9289834882690625 0.04320686729464396 0.08167302888414622 0.18815043321681166 0.009844472514621533 0.010780828773348818 2.09926665743967e-09 8.677932392051662 -0.3642656846735721 KRSDSS(ph)GGYNLSDIIQSPSSTGLLK ddPTM_A549_PD325901_60min_R1 1 KRSDSSGGYNLSDIIQSPSSTGLLK 25 2 E9PDR5;Q9P2D0-2;Q9P2D0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 KRS(0.298)DS(0.298)S(0.387)GGY(0.011)NLS(0.005)DIIQSPSSTGLLK 91.086 4.6471999999999994e-09 4275800.0 1634.6 1538.1 1761.2 1911.3 1923.4 1858.9 1693.1 1944.0 2157.6 2064.3 2468.6 True False 1800.5433886710812 1667.721084962419 1880.725622955952 2029.3566601227571 1788.3070193697797 1843.7617347163307 1757.531846999869 1905.2253949615017 2066.92357525611 1933.9597457043583 2164.9778497447232 0.8316682726723448 0.770317851131393 0.8687043256251846 0.9373567772815978 0.8260163121671856 0.8516307614573203 0.811801306515493 0.8800207333235075 0.954708878661195 0.8932930865470033 1.0 11.08013654923214 -8.776145816632603 2.0083392450524156 0.9825712146297078 0.8435478483337535 0.45868937412201416 0.04759963635468117 0.12907970867724886 1.019610450451426 0.007857902380213392 0.008437497181655316 1.674380599637395e-09 8.776145816632603 -0.13902336629595424 KRSEDES(ph)ET(ph)EDEEEKSQEDQEQK ddPTM_A549_PD325901_60min_R1 1 KRSEDESETEDEEEKSQEDQEQK 23 3 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 KRS(0.001)EDES(0.999)ET(0.999)EDEEEKS(0.001)QEDQEQK 178.91 2.3548e-40 44085000.0 6797.4 6159.7 6354.9 6199.8 6808.9 6520.0 6600.7 6223.1 7053.0 6883.3 6794.7 True False 7487.467044018596 6678.7995364690305 6786.181729118096 6582.7475652326 6330.6663534298095 6466.903281699114 6851.893250541637 6098.975388572491 6756.586937468187 6448.687263288672 5958.994975152099 1.256498297991514 1.1207929465150386 1.1388131316463954 1.1046741258687804 1.0623714871094054 1.0852338873694134 1.1498404142162828 1.023490607729002 1.133846725100776 1.0821769929624876 1.0 12.54085331557962 -14.99999998894884 0.017944190366136207 1.1215803812628837e-09 1.9303792337211594 0.39903264393995475 0.05098715246274358 1983.8836325939667 2.7669565181970843 193.2838438277313 114.14905962348512 1.0000000254462366e-15 14.99999998894884 1.930379232599579 KRSEGFS(ph)MDR ddPTM_A549_MK2206_60min_R1 1 KRSEGFSMDR 10 2 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KRS(0.333)EGFS(0.667)MDR 40.376999999999995 0.048931 153730000.0 3250.7 3120.7 3297.2 3716.4 5750.4 4115.8 4503.1 4109.5 7367.6 7807.9 6912.2 True False 3799.338688015419 3279.530300412585 3764.792539624827 4626.918166835535 4904.52377750882 4551.331224153075 5321.254980929471 4692.034209815929 5698.8503636395935 6044.089967177941 5195.709972984974 0.7312453365892304 0.6311996469134074 0.7245963610747744 0.890526644268663 0.9439564184702046 0.8759786916162876 1.0241632055286507 0.9030592997322983 1.0968376590053508 1.1632847096169932 1.0 12.343105185768454 -6.502401457805377 0.6078402379057748 1.038863380350526 0.6158314152263813 0.7805038728562438 0.07298233562911775 0.3718621255219446 0.1997797414297557 0.012683074387814592 0.0834864990474972 3.144839909109303e-07 6.502401457805377 -0.42303196512414476 KRSES(ph)PPAELPSLR ddPTM_A549_MK2206_60min_R1 1 KRSESPPAELPSLR 14 2 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 KRS(0.152)ES(0.848)PPAELPSLR 143.71 1.0764000000000001e-13 24542000.0 1146.5 1692.3 1822.0 1518.3 2512.0 1495.7 1551.4 1468.6 3136.9 2513.5 2854.8 True False 1340.0011707661972 1778.4308416022754 2080.3869972086723 1890.2835681590764 2142.4881276262795 1653.9739812346927 1833.2692983531294 1676.778547398874 2426.3971585999566 1945.6986042984358 2145.8743715282403 0.6244546225750767 0.8287674549818681 0.9694821956082501 0.8808920005940803 0.998421974768472 0.7707692506047183 0.8543227519174476 0.781396418004057 1.1307265657271142 0.9067159895817927 1.0 11.067349901819673 -8.760987438303182 24.9999996813312 1.0617319939139342 0.847605848508494 0.3058270044995486 0.10945835792177079 7.658868243557295 423663.6688633072 0.01776391073447358 0.019544780746114796 1.7338541476778677e-09 8.760987438303182 -0.21412614540544028 KRSES(ph)PPAELPSLR ddPTM_A549_PD325901_60min_R1 4 KRSESPPAELPSLR 14 2 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 KRS(0.065)ES(0.935)PPAELPSLR;KRS(0.143)ES(0.857)PPAELPSLR;KRS(0.248)ES(0.752)PPAELPSLR;KRS(0.207)ES(0.793)PPAELPSLR 115.34 8.2215e-07 97594600.0 6522.4 6116.999999999999 6369.400000000001 6089.28 7203.0 7767.0 7182.5599999999995 7246.8 7203.9 8039.5 9155.1 True False 7184.549246462899 6632.5010576133645 6801.665786313679 6465.400995841734 6697.086129001002 7703.748127140644 7455.8962512476455 7102.256888995377 6901.1451352370705 7531.884597970349 8029.080738960517 0.8948159172942934 0.8260598284221563 0.8471288317365028 0.8052479737149555 0.8341037220492614 0.9594807148667442 0.9286114430346258 0.8845666297179208 0.8595187119927412 0.9380755833507115 1.0 12.971019105622599 -14.999999999985025 0.20940303995208054 1.65295970834078 0.8471088560187389 0.401192005378636 0.04544073078745394 26.11257274832062 0.3141849997553888 7.008949611146641 0.034856816257759396 1.0000000000344804e-15 14.999999999985025 -0.8058508523220412 KRSGNSDS(ph)IER ddPTM_A549_MK2206_60min_R1 1 KRSGNSDSIER 11 2 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 KRS(0.243)GNS(0.298)DS(0.459)IER 48.625 0.0098241 101100000.0 1060.9 948.32 1147.4 933.34 1085.3 854.61 681.69 631.44 965.26 1255.8 1628.6 True False 1239.953983485268 996.5854373977834 1310.1185733244959 1162.0083418992253 925.6538076882167 945.0442629557949 805.544249061715 720.948553703898 746.6301512034792 972.1139078090216 1224.1736729266127 1.0128905815470852 0.8140882780261581 1.0702064603238983 0.9492185362238924 0.7561458215934923 0.7719854493329305 0.6580310187000781 0.5889266936939901 0.6099054143343259 0.7940980347053244 1.0 10.257592531659903 -6.754237153682814 19.15720018432584 0.7754327849939386 0.9588230423286362 0.41557562899169775 0.12191639290211786 11.72681018117566 31184.155977722392 0.02429088339725081 0.04945806323999913 1.7610141529103996e-07 6.754237153682814 0.1833902573346976 KRSPS(ph)PS(ph)PTPEAK ddPTM_A549_PD325901_60min_R1 1 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 KRS(0.288)PS(0.948)PS(0.76)PT(0.004)PEAK 87.429 0.00016057 220680000.0 14261.0 13494.0 15650.0 14322.0 18629.0 15214.0 16639.0 16553.0 16861.0 17086.0 19395.0 True False 15708.766221606687 14631.186737197113 16712.10311109509 15206.637412378028 17320.5633065611 15090.102228185617 17272.206250210165 16222.83742942271 16152.390805706946 16007.187044084994 17009.537955034808 0.9235269213739522 0.8601754366212102 0.9825136435377613 0.8940064952132857 1.018285349804827 0.8871553282679827 1.0154424121260512 0.953749447651561 0.949607852277131 0.9410712440514518 1.0 14.054056331895048 -2.0000000000028124 0.12332499139853467 1.006933560107143 0.6751311936652189 0.14089538413269076 0.04709309348783664 76.69349790246609 0.6228252343199407 0.13373593612012122 4.41784514751052 0.009999999999935241 2.0000000000028124 -0.33180236644192407 KRSS(ph)ISK ddPTM_A549_MK2206_60min_R1 1 KRSSISK 7 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 KRS(0.062)S(0.937)ISK 50.123000000000005 0.010877 5362500.0 746.3 946.49 806.4 840.19 1115.2 753.35 1045.8 982.69 1233.2 1249.8 1574.6 True False 872.2571947168019 994.6622982143456 920.7596457459236 1046.036587717562 951.1555572965073 833.0689969667419 1235.8083229455353 1121.9893168619087 953.8821690157371 967.4693119762029 1183.5833632507938 0.7369630410494171 0.840382121866293 0.7779423691939986 0.8837878430840308 0.8036236287438956 0.7038532500817349 1.044124445574583 0.9479596889401075 0.8059273209077843 0.8174069879784228 1.0 10.208945607560139 -7.752187734100768 24.999805969701207 0.9188841823192158 0.7975178675454572 0.40851880320305656 0.07880211146875701 189.54233838080754 512180.0598618983 0.013669752181238982 0.020118528759417307 1.769343952052456e-08 7.752187734100768 -0.12136631477375859 KRSS(ph)LSPGR ddPTM_A549_MK2206_60min_R1 1 KRSSLSPGR 9 2 F8W1J5;F8VVA2;Q9BUQ8 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 KRS(0.177)S(0.764)LS(0.059)PGR 42.031000000000006 0.027013 3927100.0 1004.1 1027.0 1009.3 730.37 1051.3 913.2 683.72 755.72 1445.5 1406.1 1380.3 True False 1173.5675321119395 1079.2699133283315 1152.4339167303574 909.3106827875558 896.6551626486882 1009.8342178669004 807.9430737849699 862.8456242954359 1118.096557989173 1088.4610334211377 1037.5334156579906 1.1311129978090178 1.04022665394721 1.11074390408862 0.876415804122205 0.8642181052839063 0.9733028378912271 0.7787152313283159 0.8316316479775545 1.0776487206246657 1.049085279562634 1.0 10.018942086497784 -6.228653542343389 24.745286757484262 0.9788999127025484 1.088647759038248 0.2732992621879039 0.09779698964422509 869.236310500535 656059.6784370338 0.016114742467037285 0.04263210677494766 5.906720998947178e-07 6.228653542343389 0.10974784633569956 KRT(ph)EEPDRDER ddPTM_A549_MK2206_60min_R1 9 KRTEEPDRDER 11 3 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 1 KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER 109.1 2.5839e-05 2240733700.0 12043.890000000001 12221.38 11479.899999999998 10390.789999999999 13292.310000000001 8912.880000000001 8391.93 9435.34 14787.12 15950.790000000003 17413.629999999997 True False 14076.60418716032 12843.396040265441 13107.922441962592 12936.534016460284 11337.028807216579 9856.035045709086 9916.635054098611 10772.828339516878 11437.860930178382 12347.495460695229 13089.34507926135 1.0754246375140017 0.9812099812858026 1.0014192736602747 0.9883255379183808 0.8661265127144423 0.7529815270379652 0.7576112474726062 0.8230227161315549 0.8738298868978888 0.9433241606761898 1.0 13.67610529390372 -6.645012583563362 5.080281571226926 0.8974672023015029 1.0122345880450236 0.42976206421446395 0.0770621842440653 0.25326145342356365 10.263095204066747 0.01429246230698875 0.030207858884448595 2.2645786910966989e-07 6.645012583563362 0.11476738574352074 KRT(ph)EEPDRDER ddPTM_A549_PD325901_60min_R1 9 KRTEEPDRDER 11 3 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 1 KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER 180.27 1.1958999999999999e-16 2857835000.0 20900.1 19972.229999999996 19245.34 19898.04 20565.150000000005 20706.28 18941.809999999998 20611.730000000003 21208.2 21790.52 23565.109999999997 True False 23021.862766159575 21655.359914647284 20551.44450403085 21127.096739072374 19120.724809916002 20537.65492082525 19662.65094490615 20200.612875560615 20316.89310750215 20414.6628484066 20666.75086154009 1.113956563390051 1.0478357270443972 0.9944206828503545 1.0222747097798022 0.9251925925859408 0.9937534476715891 0.9514147180966638 0.9774450280500097 0.9830714679640808 0.9878022426058942 1.0 14.335023971776787 -5.32484382084319 1.3330814877836121 0.9847413303489452 1.1612131612029954 0.742857672041894 0.024048968066814034 0.45174295860189134 0.7481128154330671 0.0034271825830817543 0.10397843490323118 4.733214422276531e-06 5.32484382084319 0.17647183085405027 KRT(ph)PNETTSVLEPK ddPTM_A549_MK2206_60min_R1 2 KRTPNETTSVLEPK 14 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 KRT(0.7)PNET(0.1)T(0.1)S(0.1)VLEPK;KRT(1)PNETTSVLEPK 80.638 0.00093823 14691900.0 3076.7 3450.6000000000004 3703.8 3130.5 4083.7000000000003 3342.0 2940.8999999999996 3192.0 5172.3 5064.0 4775.7 True False 3595.971741906986 3626.2208012957544 4229.054533623203 3897.4726405334873 3482.9931396446805 3695.648221759942 3475.2234623738045 3644.475775090018 4000.78230846586 3920.0388828992573 3589.7618873852525 1.0017298792277993 1.0101563599632115 1.178087757988763 1.0857189871644575 0.9702574290189644 1.0294967570820737 0.9680930299544529 1.0152416481708815 1.1144979622534215 1.09200526549536 1.0 11.809672436431482 -5.554561383859559 24.999912319657042 1.0493338939029513 1.0038355604408085 0.07379833082276044 0.060914142083665815 381.4260452259336 300972.3995908592 0.009101773497985 0.03525191389702725 2.7889364358542673e-06 5.554561383859559 -0.045498333462142826 KRT(ph)PNETTSVLEPK ddPTM_A549_PD325901_60min_R1 3 KRTPNETTSVLEPK 14 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 KRT(0.85)PNET(0.067)T(0.067)S(0.016)VLEPK;KRT(0.934)PNET(0.021)T(0.021)S(0.024)VLEPK;KRT(0.992)PNET(0.003)T(0.003)S(0.003)VLEPK 84.874 7.3587e-05 31382700.0 8938.0 9227.9 9467.5 9844.0 11839.3 10870.9 9706.3 10499.4 12308.1 10935.3 12235.1 True False 9845.37918019217 10005.567518317865 10110.021482702407 10452.041522653913 11007.748411367698 10782.370994635403 10075.678557991163 10289.981230380035 11790.833359570706 10244.843291770032 10730.260264689161 0.9175340520482125 0.9324627056105904 0.9421972285213045 0.9740715756028023 1.0258603370126713 1.0048564273988514 0.9389966607937669 0.9589684664259278 1.0988394567065303 0.9547618640233243 1.0 13.389397448935835 -6.486238494203862 0.4492343776477569 1.0401459099120545 0.8942486338177558 0.08433435238317155 0.04788038593558335 1.5438436797651518 0.40140101030862524 0.012994823771799563 0.09982646909251162 3.264085346550901e-07 6.486238494203862 -0.1458972760942987 KRT(ph)PSVGK ddPTM_A549_MK2206_60min_R1 2 KRTPSVGK 8 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KRT(1)PSVGK;KRT(0.998)PS(0.002)VGK 66.595 0.0029035 404060000.0 3964.5 4358.1 4442.0 3620.3 5557.5 4246.9 3777.7999999999997 4384.6 5432.4 5112.0 5868.4 True False 4633.610677280935 4579.908675049856 5071.9423938534155 4507.273662521444 4739.9991119757315 4696.304139135936 4464.177359364735 5006.130477274346 4201.970073760209 3957.1956495618106 4411.114320399446 1.050439943452053 1.0382656948766462 1.1498097817138706 1.0217993312205271 1.0745582108482972 1.064652556706049 1.0120293955474915 1.134890214502765 0.9525869811008892 0.8970965978509188 1.0 12.106927435102678 -8.779831287605083 24.99614537053942 0.9776105130782958 1.066681687495823 0.527573835493548 0.04796909744135539 140.1499019672391 190474.67622325115 0.006946408091974175 0.007401466750189405 1.6602317401156341e-09 8.779831287605083 0.0890711744175271 KRT(ph)PSVGK ddPTM_A549_PD325901_60min_R1 2 KRTPSVGK 8 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KRT(1)PSVGK;KRT(1)PSVGK 85.958 0.00099521 638940000.0 6649.6 5432.4 4990.7 4994.700000000001 6616.299999999999 6550.5 5956.3 5552.5 6427.4 6692.9 6296.2 True False 7324.662496823211 5890.207413009457 5329.398913517073 5303.211275213278 6151.593912995882 6497.154899811355 6182.970255912421 5441.751031648015 6157.278729885577 6270.309151782539 5521.807314900243 1.326497300450539 1.0667173041542233 0.9651548142826412 0.9604122296884395 1.114054432213924 1.176635570437092 1.1197366918668226 0.9855017970228331 1.1150839532684444 1.1355537769060704 1.0 12.43092483019618 -10.939283714661148 0.9674278934917933 0.9950108031622593 1.0873676693854135 0.0 0.10750293101506196 1.3351946937495456 2.009128337146944 0.09267948811825148 0.017376515366959028 1.1500488428574626e-11 10.939283714661148 0.0923568662231542 KRT(ph)PVK ddPTM_A549_PD325901_60min_R1 1 KRTPVK 6 2 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608;C9JJC9;C9JC17;C9J321;C9J0U5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 KRT(1)PVK 44.135 0.044604000000000005 1912300.0 1251.1 1129.9 664.27 754.01 1053.4 1234.8 686.01 503.55 1007.3 927.31 1155.7 True False 1378.1107509888584 1225.1206383843944 709.3513567800086 800.5834852190442 979.4128180327159 1224.7441981966347 712.1164859490758 493.5063002226668 964.9666839801083 868.7594883442852 1013.5562265859103 1.3596786392708802 1.20873475614779 0.6998638439323751 0.7898757505696067 0.9663132565736349 1.2083633508148783 0.702591989738732 0.4869056962779525 0.9520603383105126 0.8571399055685719 1.0 9.985210408559775 -7.754951510218098 24.999387710187527 0.9134655660263798 1.0165125132938169 0.13118967143964866 0.23046220736374776 492.98978611338725 1899605.024132346 0.0383627286301619 0.05614369627534421 1.7581199003382035e-08 7.754951510218098 0.10304694726743702 KRT(ph)SSEDNLYLAVLR ddPTM_A549_MK2206_60min_R1 2 KRTSSEDNLYLAVLR 15 2 Q15149-4 Q15149-4 PLEC Plectin 1 KRT(0.333)S(0.333)S(0.333)EDNLYLAVLR;KRT(0.333)S(0.333)S(0.333)EDNLYLAVLR 75.548 0.0002301 19095000.0 987.25 1259.58 1492.99 1562.0900000000001 2045.08 1501.94 1516.32 1441.26 2106.2 2134.87 2364.23 True False 1153.8736640548868 1323.6872418988323 1704.71843192238 1944.8021201248841 1744.2514411010945 1660.8742938929165 1791.8157164360034 1645.5630186736346 1629.1490629102705 1652.6013842683908 1777.1264415714634 0.649291821371218 0.7448469680797347 0.9592555667648189 1.0943521376031915 0.981501034647091 0.9345842001114179 1.0082657454871644 0.9259684511916378 0.9167322171345667 0.9299289828848877 1.0 10.795330616641248 -5.67762735369799 3.4507254138340637 0.969815570163524 0.6682689429917416 0.8293814902140934 0.04890189216356624 0.07059810662456754 1.6010603158105048 0.007316407691720634 0.03382903116605855 2.1007416515055466e-06 5.67762735369799 -0.3015466271717825 KRT(ph)SSEDNLYLAVLR ddPTM_A549_PD325901_60min_R1 3 KRTSSEDNLYLAVLR 15 2 Q15149-4 Q15149-4 PLEC Plectin 1 KRT(0.333)S(0.333)S(0.333)EDNLYLAVLR;KRT(0.717)S(0.217)S(0.066)EDNLYLAVLR;KRT(0.333)S(0.333)S(0.333)EDNLYLAVLR 202.61 1.738e-38 79109000.0 9350.3 10687.93 11697.05 13416.51 11915.84 22604.7 15737.6 16884.6 15860.300000000001 14780.45 16683.7 True False 10299.53557267295 11588.639370393597 12490.88215307571 14245.21735159503 11078.912505816365 22420.614817764395 16336.502979945159 16547.823407287542 15193.74674667895 13847.209864552618 14631.710666688015 0.7039187561384658 0.7920221793872283 0.8536856993429808 0.9735852270525747 0.7571850454260076 1.5323303835421898 1.1165135336593581 1.1309561666608086 1.038412192039207 0.946383521379939 1.0 13.836810831600722 -6.379264512058179 1.281509502455831 1.0611672934216705 0.7495794874919162 0.3740673481745539 0.17337530826907543 0.43223707328056865 1.311226552115057 0.02580794623447619 0.10168840624944651 4.17575959730137e-07 6.379264512058179 -0.3115878059297543 KRTEEPDRDER ddPTM_A549_MK2206_60min_R1 1 KRTEEPDRDER 11 3 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 0 51.218 0.007098 7583600.0 481.91 484.26 317.87 881.73 705.96 195.7 375.05 372.51 585.32 618.14 603.98 False True 563.2446264316947 508.9067655583038 362.94874577536797 1097.7538895823632 602.1142191795572 216.40884410485356 443.1917302741662 425.3144332640298 452.7459545639728 478.50174468312554 453.99509700000954 1.2406403288352756 1.1209521180319997 0.799455210361799 2.4179862223982127 1.326257096515614 0.4766766106834167 0.9762037810601222 0.9368260496082425 0.9972485552282591 1.053979983143112 1.0 8.82653290673592 -7.028318693466368 24.694028371215087 0.9567111139295917 1.4001094849361095 0.2565844039438071 0.3982238756323214 692.4231723630119 603795.4654752857 0.0568354199665414 0.09858676467608889 9.368742586478709e-08 7.028318693466368 0.4433983710065178 KRTEEPDRDER ddPTM_A549_PD325901_60min_R1 1 KRTEEPDRDER 11 3 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 0 32.946 0.051771000000000005 6775900.0 164.17 162.57 148.74 187.51 156.52 203.19 0.0 266.52 166.51 215.82 188.63 False True 180.8364175444336 176.2703444394646 158.8343908462801 199.09206683389215 145.5265751646865 201.53528800742978 0.0 261.2040495191047 159.5121637541227 202.19308836792834 165.42970582408947 1.0931314702132575 1.0655301813019156 0.960132220842957 1.2034843793145453 0.8796882908045122 1.2182533179484305 0.0 1.5789428399084342 0.9642292655935735 1.2222296313754641 1.0 7.370074508909386 -6.778246520875276 24.792898607773914 0.965076481407619 1.0708927294076689 0.015636113007535757 0.3664713944049086 877.9742064844678 1295133.7530687193 0.04731513207551652 0.08958805874756806 1.666301092742762e-07 6.778246520875276 0.10581624800004985 KRTES(ph)SCVK ddPTM_A549_PD325901_60min_R1 3 KRTESSCVK 9 2 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 KRT(0.241)ES(0.725)S(0.034)CVK;KRT(0.007)ES(0.897)S(0.095)CVK;KRT(0.066)ES(0.88)S(0.054)CVK 51.773999999999994 0.0083192 38611000.0 7771.4 9551.1 10622.7 9921.8 9151.8 9198.5 8736.6 11043.7 9703.5 10952.2 13633.8 True False 8560.346806997699 10356.004716588364 11343.620301484327 10534.647051957285 8509.009139996027 9123.590465752955 9069.076093850961 10823.424739884947 9295.695639830214 10260.676222885862 11956.929031778987 0.7159318905586969 0.8661090727447068 0.9487068352865008 0.8810495591266304 0.7116383410306176 0.7630379373754232 0.758478708851351 0.9052010521362613 0.7774316979823349 0.8581364157648804 1.0 13.545559280830755 -10.831099895585506 0.8865263956307445 1.0095925771502425 0.815242435799352 0.14282275270153033 0.08487723456627458 0.5113305590168615 0.653148505132395 0.06884043936271915 0.013906477489275069 1.4753671331191337e-11 10.831099895585506 -0.19435014135089057 KRTS(ph)SEDNLYLAVLR ddPTM_A549_PD325901_60min_R1 1 KRTSSEDNLYLAVLR 15 2 Q15149-4 Q15149-4 PLEC Plectin 1 KRT(0.151)S(0.821)S(0.028)EDNLYLAVLR 94.85600000000001 6.908400000000001e-06 9029700.0 2649.7 2721.1 2867.6 2693.7 2984.8 3329.3 2600.2 3346.0 3615.3 3209.9 3530.6 True False 2918.6955933939566 2950.4166467012797 3062.212580279633 2860.0837311634314 2775.1579450009995 3302.187284625899 2699.152033884037 3279.2614051137807 3463.3615135444124 3007.2263661950374 3096.358582317395 0.9426219592465707 0.952866590953142 0.9889722068261855 0.9236926716100403 0.8962650388263492 1.0664744398416726 0.8717181689802612 1.0590702975556199 1.1185272704921478 0.971213858552633 1.0 11.596356841084585 -8.297277789388026 23.54320966774 1.0577675690408874 0.9521578544856617 0.3141245523356033 0.05988011402729262 215.39579769644524 141498.6280237957 0.009819138533538356 0.01187108866857576 5.043386024029248e-09 8.297277789388026 -0.10560971455522572 KRTS(ph)TGL ddPTM_A549_PD325901_60min_R1 1 KRTSTGL 7 2 Q9UK32-2;Q9UK32 Q9UK32-2 RPS6KA6 Ribosomal protein S6 kinase alpha-6 1 KRT(0.041)S(0.952)T(0.007)GL 52.937 0.01514 10790000.0 1549.9 1176.4 1454.8 1584.2 1604.7 1790.3 2002.0 2188.4 2624.6 2322.5 2893.0 True False 1707.2447070239257 1275.5393565761585 1553.531476423075 1682.0524360207567 1491.991407914467 1775.7203903720742 2078.1872055364342 2144.7506452334123 2514.297189292356 2175.85695363967 2537.179340237985 0.6728908279947557 0.5027391388330138 0.6123065294538286 0.6629615846796947 0.5880512206025292 0.6998797295131346 0.8190935392613998 0.8453287519802352 0.9909812638851605 0.8575889449878528 1.0 11.309009784405875 -8.036467607662688 0.9320508033683622 1.0012738916075559 0.5947620352435161 0.8316704314986636 0.06408381441244076 0.08135692020306112 0.14094769635460966 0.008663979779200932 0.01296123576405618 9.194590511232344e-09 8.036467607662688 -0.40651185636403975 KRTSS(ph)EDNLYLAVLR ddPTM_A549_MK2206_60min_R1 2 KRTSSEDNLYLAVLR 15 2 Q15149-4 Q15149-4 PLEC Plectin 1 KRT(0.003)S(0.029)S(0.968)EDNLYLAVLR;KRT(0.01)S(0.089)S(0.901)EDNLYLAVLR 225.69 1.3781999999999999e-54 64411000.0 6349.0 11000.4 9282.8 9006.2 17293.1 10228.7 9687.5 7842.200000000001 20982.1 16830.4 18610.3 True False 7420.5559818531065 11560.273373492675 10599.240624417489 11212.719404303685 14749.307898031047 11311.094244738459 11447.593352968901 8953.855865730253 16229.687851528628 13028.400950779545 13988.848891849519 0.5304622302537437 0.8263920400361296 0.7576921236595131 0.8015469672302113 1.0543618000352126 0.8085793428885181 0.8183370512808057 0.6400709547264564 1.1601875162855404 0.9313418889219992 1.0 13.771989631091019 -8.76995748655086 24.999966155749302 1.0756441145431226 0.7926412242473194 0.3965321748132651 0.13401500388822063 112.23695178656897 329405.61044848175 0.022763765696692487 0.02442190236439247 1.6984099030867033e-09 8.76995748655086 -0.28300289029580317 KRTSS(ph)EDNLYLAVLR ddPTM_A549_PD325901_60min_R1 1 KRTSSEDNLYLAVLR 15 2 Q15149-4 Q15149-4 PLEC Plectin 1 KRT(0.059)S(0.291)S(0.65)EDNLYLAVLR 235.26 7.772799999999998e-65 55697000.0 7383.4 8078.1 9465.0 9908.2 7454.9 16978.0 12317.0 14985.0 11488.0 12133.0 12206.0 True False 8132.957332628202 8758.869837094411 10107.351817668687 10520.207010845128 6931.293542008825 16839.736797037953 12785.730175121023 14686.112419494915 11005.199310596128 11366.920309369272 10704.739380209065 0.7597529508905582 0.8182235480938304 0.94419410493591 0.9827616196144765 0.64749764527882 1.5731103952116088 1.1943990153332735 1.3719261999639727 1.0280679351187711 1.0618586689167275 1.0 13.385962051549665 KRVETS(ph)EHFR ddPTM_A549_PD325901_60min_R1 1 KRVETSEHFR 10 2 P42167 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 KRVET(0.306)S(0.694)EHFR 44.61600000000001 0.011254 3321300.0 823.19 834.54 828.16 867.93 1280.4 1147.2 1128.6 1038.2 1283.4 1132.1 1617.5 True False 906.7596427995518 904.869614618385 884.3639177306392 921.5400648879523 1190.4691211402035 1137.8575835529475 1171.5494905936164 1017.4922865478554 1229.463161143721 1060.619012794605 1418.557754177303 0.6392123550340958 0.6378799960408852 0.6234246826584292 0.6496316855441691 0.839210894046834 0.8021228463925684 0.8258736643916625 0.7172723729799448 0.866699404746303 0.7476741850455813 1.0 10.470209173356144 -5.219430643115661 0.08945423023443683 1.2461581119574754 1.4384462192464673e-10 0.3412645340025805 0.09275808440123952 16.38858666132579 0.2191480904181096 0.7460415883410945 2.841383578863723 6.033500553141104e-06 5.219430643115661 -1.2461581118136307 KRVS(ph)LEPHQGPGT(ph)PESK ddPTM_A549_MK2206_60min_R1 2 KRVSLEPHQGPGTPESK 17 2 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 2 KRVS(1)LEPHQGPGT(0.981)PES(0.019)K;KRVS(1)LEPHQGPGT(0.997)PES(0.003)K 111.58 2.1345e-09 22196000.0 6854.8 6711.5 5468.7 3672.8 5729.5 3825.4 4491.5 3760.7 6594.0 8659.2 9726.7 True False 8011.722656230384 7053.086682865721 6244.243892225609 4572.636164878255 4886.698139822758 4230.201288904992 5307.5474110823025 4293.790741660725 5100.469528454243 6703.080705924414 7311.291946736634 1.095801222902388 0.9646840441125919 0.8540547878152647 0.6254210881182543 0.6683768307192159 0.5785846495697831 0.7259383772044974 0.587282079958145 0.6976153552082976 0.916812070254739 1.0 12.835910645759197 -5.655290694420665 2.361104288212554 0.7793734174123845 1.0820021930704085 0.4118945357316889 0.13253877495544825 0.3467361769235197 3.536977889648123 0.024161257255605577 0.15237409188234127 2.2116138733255325e-06 5.655290694420665 0.30262877565802393 KRVS(ph)LEPHQGPGTPES(ph)K ddPTM_A549_PD325901_60min_R1 1 KRVSLEPHQGPGTPESK 17 2 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 2 KRVS(1)LEPHQGPGT(0.462)PES(0.538)K 78.098 0.00011632 32849000.0 2865.4 2545.0 2408.9 2096.9 2835.7 2363.2 2244.3 2012.3 2611.8 2116.4 2248.5 True False 3156.2932986040096 2759.476081678276 2572.382439892456 2226.4207505945724 2636.530214633921 2343.954882716464 2329.7080646280847 1972.163097881189 2502.0351287791586 1982.770142812916 1971.9487544158678 1.6005960051121964 1.3993650065697016 1.3044874691251545 1.1290459478771213 1.3370176120093527 1.1886489836348675 1.1814242431052386 1.000108696265479 1.2688134634210175 1.005487662076824 1.0 10.94540634514529 -2.0000000000000004 0.30689330223276023 1.1030521211881503 5.239074542394023 0.7235568650241577 0.09428740447846728 22.98731458826914 0.2874832572078621 0.03463034371329152 53.495627527349455 0.00999999999999999 2.0000000000000004 4.1360224212058725 KRVS(ph)VELTNSLFK ddPTM_A549_MK2206_60min_R1 4 KRVSVELTNSLFK 13 2 P14923 P14923 JUP Junction plakoglobin 1 KRVS(1)VELTNSLFK;KRVS(1)VELTNSLFK;KRVS(0.996)VELT(0.004)NSLFK;KRVS(1)VELTNSLFK 138.55 2.7966999999999997e-09 78990000.0 9071.72 9220.599999999999 9672.08 7539.129999999999 11888.58 8799.119999999999 8359.650000000001 8808.36 12778.2 10841.3 12103.0 True False 10602.804553740187 9689.889155633118 11043.726381976974 9386.21718844441 10139.785630706701 9730.237038016861 9878.490195937698 10056.972004471158 9883.958102592353 8392.242800390142 9097.491074193042 1.1654646833144233 1.0651166433260417 1.2139309939313754 1.031736894479666 1.1145694508533621 1.0695516993271625 1.0858477480632134 1.10546654263832 1.0864487826352796 0.922478816626324 1.0 13.15125301526063 -14.999999999991127 0.12909762586078583 0.640355250899532 1.1493031238086877 0.5347935486686048 0.05079148785344034 45.4128410439913 0.4018237831471658 4.199328493564258 0.12402898014800248 1.0000000000204306e-15 14.999999999991127 0.5089478729091557 KRVS(ph)VELTNSLFK ddPTM_A549_PD325901_60min_R1 4 KRVSVELTNSLFK 13 2 P14923 P14923 JUP Junction plakoglobin 1 KRVS(1)VELTNSLFK;KRVS(1)VELTNSLFK;KRVS(1)VELTNSLFK;KRVS(1)VELTNSLFK 122.31 2.5003e-06 116698000.0 8464.95 8515.95 9981.55 9647.5 10854.77 10219.82 9505.6 11627.1 10739.4 10447.9 11404.400000000001 True False 9324.305492433166 9233.61899322912 10658.95800693617 10243.404163937788 10092.368402123593 10136.593174290523 9867.340809663905 11395.18836921651 10288.060365269508 9788.217810950235 10001.731098448001 0.9322691642729775 0.9232020839534397 1.0657113155731763 1.0241631236743896 1.0090621616181679 1.0134838733930218 0.9865632971471359 1.1393216091347163 1.0286279708985515 0.9786523667357047 1.0 13.287962102649931 -5.746912633408226 24.98930285291145 1.0233802275364328 0.9277355501483779 0.45181966598711487 0.042113738294655444 156.30293882951761 268871.79178105586 0.005443478513908422 0.02089539998292817 1.7909661046799705e-06 5.746912633408226 -0.09564467738805482 KRYS(ph)TTR ddPTM_A549_MK2206_60min_R1 3 KRYSTTR 7 2 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 KRY(0.001)S(0.987)T(0.01)T(0.002)R;KRY(0.001)S(0.838)T(0.143)T(0.018)R;KRYS(0.986)T(0.001)T(0.013)R 55.567 0.013041 85045400.0 7309.43 6844.92 6442.34 5482.01 9497.15 7296.8 6419.11 6547.8 9839.84 9373.34 9389.02 True False 8543.083085594042 7193.297190982829 7355.96068474057 6825.1026960967765 8100.131815798527 8068.942532776167 7585.3791966943145 7475.970701796506 7611.131950995632 7255.895983932643 7057.46721023052 1.210502696096125 1.0192462786869785 1.0422947022803526 0.9670753675203893 1.1477392065040781 1.143319875589278 1.0748019042438528 1.0592993887324509 1.0784509122426411 1.0281161453239882 1.0 12.784934805432668 -10.596488596596101 0.6536454551713008 0.9933029102779698 1.0801324374382786 0.14197217888402547 0.06366349319325669 1.301022354554365 0.8783722247333723 0.06296618962122445 0.012969997630523077 2.532278125214139e-11 10.596488596596101 0.08682952716030878 KRYS(ph)TTR ddPTM_A549_PD325901_60min_R1 1 KRYSTTR 7 2 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 KRYS(0.981)T(0.019)T(0.001)R 68.657 0.0074212 54600000.0 3591.0 3456.0 3830.8 3847.8 4339.0 3814.7 4413.6 5280.7 3752.4 4468.1 4657.8 True False 3955.555676445523 3747.249248833054 4090.781124471761 4085.4698670121616 4034.2436087373794 3783.6343479597517 4581.561963214593 5175.372295870991 3594.699677322502 4185.983403469284 4084.920128226919 0.968331216346806 0.9173372137534467 1.0014347884562889 1.00013457760935 0.9875942447101075 0.9262443889207836 1.1215793257635231 1.266945774559707 0.8799926472204488 1.0247405755975532 1.0 11.996092154529382 -2.002115433028252 24.620472937479402 0.9798521657973005 0.00017441002561080499 0.0 0.10563828805484525 0.0 0.0 0.014697971957043789 0.0 0.009951408793535487 2.002115433028252 -0.9796777557716897 KS(ph)ACPGAGLR ddPTM_A549_MK2206_60min_R1 1 KSACPGAGLR 10 1 A0A087WYI2 A0A087WYI2 EVL 1 KS(1)ACPGAGLR 46.158 0.008443899999999999 66521000.0 1375.0 1399.8 967.06 1037.6 1469.5 1144.5 1259.9 1256.2 1771.1 1523.3 1357.5 True False 1607.0663844775581 1471.0438409707872 1104.2036495722386 1291.8120465796346 1253.3384966348788 1265.610230342386 1488.8075215902454 1434.2701969511545 1369.9486778655307 1179.1854720222032 1020.3952849059782 1.5749449338406512 1.441641158804779 1.082133233959409 1.2659917834671937 1.228287228659984 1.2403136794766771 1.4590497855225075 1.4056025328295316 1.3425666485628276 1.1556163473754746 1.0 9.994912422252469 -10.591766521924148 0.8311213440404112 0.9950401509021586 1.3303809991939965 0.33425105718551984 0.1349964966803497 0.46589935995605175 0.5630966037074443 0.09681323105963215 0.02521345885157403 2.5599617605085684e-11 10.591766521924148 0.33534084829183797 KS(ph)ACPGAGLR ddPTM_A549_PD325901_60min_R1 4 KSACPGAGLR 10 1 A0A087WYI2 A0A087WYI2 EVL 1 KS(1)ACPGAGLR;KS(1)ACPGAGLR;KS(1)ACPGAGLR;KS(1)ACPGAGLR 51.841 0.0053695 201812000.0 4005.45 4454.67 4640.33 4532.9400000000005 4850.37 4303.86 4636.389999999999 4907.58 4898.610000000001 4838.84 4645.139999999999 True False 4412.080335343555 4830.080674565722 4955.250698371106 4812.929408746323 4509.696744068111 4268.810791100233 4812.830358579957 4809.694466977968 4692.73845707515 4533.314816598398 4073.8172279685655 1.0830334520293798 1.1856400040249895 1.216365492381717 1.1814298824462286 1.10699535391697 1.0478650740128814 1.1814055685998228 1.1806358012228133 1.1519266070302359 1.1127928826740623 1.0 11.992165539826374 -10.616939001957231 0.718506662740009 0.9905930162885587 1.1510973007392602 0.18033328082818723 0.058249671082553085 0.48828177202650946 0.41083367894994244 0.04599140794034586 0.010079112879645675 2.4158001174360506e-11 10.616939001957231 0.16050428445070153 KS(ph)APATGGVK ddPTM_A549_MK2206_60min_R1 7 KSAPATGGVK 10 1 P68431;Q71DI3;Q16695;Q5TEC6 P68431;Q5TEC6 HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3.1;Histone H3.2;Histone H3.1t;Histone H3 1 KS(0.999)APAT(0.001)GGVK;KS(1)APATGGVK;KS(1)APATGGVK;KS(1)APATGGVK;KS(1)APATGGVK;KS(0.996)APAT(0.004)GGVK;KS(0.999)APAT(0.001)GGVK 134.99 5.6133e-07 1104194100.0 69119.0 67423.9 69638.6 62399.0 86297.0 69125.35 64200.799999999996 62136.3 93978.29999999999 91282.09999999999 90382.7 True False 80784.59740269417 70855.48851923874 79514.40062778043 77686.75780119753 73602.82561694476 76440.14865530618 75865.25433138432 70944.31080943797 72692.36510250693 70661.41021182838 67938.18115438048 1.189089787657428 1.0429406162380042 1.170393426445941 1.1434918698318506 1.0833793953019162 1.125142701150714 1.1166806800286664 1.0442480149450346 1.0699780869511828 1.0400839264633788 1.0 16.051934974353543 -9.332312734305459 0.26554892495955407 0.9753806712438191 1.147078809521292 0.5112424389999827 0.040172089285028065 1.007108911682339 0.2016963563545403 0.06333139160932066 0.03526390937840108 4.6525094689448275e-10 9.332312734305459 0.17169813827747293 KS(ph)APATGGVK ddPTM_A549_PD325901_60min_R1 4 KSAPATGGVK 10 1 P68431;Q71DI3;Q16695;Q5TEC6 P68431;Q5TEC6 HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3.1;Histone H3.2;Histone H3.1t;Histone H3 1 KS(0.999)APAT(0.001)GGVK;KS(0.925)APAT(0.075)GGVK;KS(1)APATGGVK;KS(0.971)APAT(0.029)GGVK 125.53 1.0770999999999999e-05 1919840000.0 45239.0 43404.3 47929.8 45058.0 51676.3 45351.9 48524.5 50670.0 48499.9 47817.6 48704.5 True False 49831.629976808385 47062.13268840413 51182.60445330127 47841.13032585733 48046.734961556926 44982.569162774504 50371.12640112525 49659.347100153944 46461.61786594543 44798.38857539735 42714.15526326334 1.166630351687336 1.101792424509921 1.1982586132827326 1.12002988309132 1.1248433842464378 1.0531068421119434 1.1792607413319807 1.162596960985996 1.0877335061312832 1.0487949088373187 1.0 15.382426630751374 -9.800690458167916 0.6077414850748257 1.00116729780066 1.1387958828609466 0.5015781199399395 0.04172773067112459 0.354197824781624 0.2734685131084347 0.02186444421436201 0.009683869396739517 1.5823754698691977e-10 9.800690458167916 0.13762858506028652 KS(ph)APSTGGVK ddPTM_A549_PD325901_60min_R1 1 KSAPSTGGVK 10 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;K7EP01 K7EK07 H3F3B;H3F3A Histone H3;Histone H3.3 1 KS(0.992)APS(0.003)T(0.004)GGVK 55.452 0.01379 5203300.0 2056.7 2035.4 2083.3 1758.1 2275.7 2311.8 2170.7 2137.8 2293.4 2570.5 2502.4 True False 2265.4946699374827 2206.930301236922 2224.6852659005995 1866.6938440652 2115.8626827387993 2292.973467274846 2253.307176352617 2095.159901928344 2197.016373513332 2408.1981913157265 2194.620664020577 1.0322944220287544 1.0056090045164314 1.013699224824095 0.8505769924928118 0.9641131688163859 1.0448154001585337 1.026741073432037 0.9546797477473764 1.0010916280576554 1.0973186531944306 1.0 11.099755878896264 KS(ph)ASPEVSEGHENQHGQESEAK ddPTM_A549_MK2206_60min_R1 1 KSASPEVSEGHENQHGQESEAK 22 1 O60930 O60930 RNASEH1 Ribonuclease H1 1 KS(0.495)AS(0.495)PEVS(0.009)EGHENQHGQESEAK 59.18899999999999 0.00047597 3777300.0 763.75 721.98 539.05 646.97 855.99 593.95 780.49 701.03 1123.6 1233.3 1299.6 True False 892.6523281052624 758.7256981740884 615.4953956341025 805.4776790435869 730.0750049230962 656.8013947678987 922.2949301738007 800.4031493143345 869.1063940205012 954.6966734359501 976.8734528646847 0.9137850204522975 0.776687805313086 0.6300666619910288 0.8245465947319184 0.7473588342299085 0.6723505412516088 0.9441293828480728 0.8193519303520324 0.8896816588390684 0.9772982064732119 1.0 9.932027873002866 -8.978324588078102 0.5421575060596142 0.9874258078625844 0.7609618004812432 0.4724744146097185 0.08437776506579049 0.43222811233937175 0.29404816439783105 0.032689866285810394 0.02695548853058679 1.0511759400183419e-09 8.978324588078102 -0.2264640073813412 KS(ph)ESDKDVK ddPTM_A549_MK2206_60min_R1 1 KSESDKDVK 9 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 KS(0.5)ES(0.5)DKDVK 43.083999999999996 0.023434 3923500.0 2012.4 1709.2 1614.0 1239.7 616.95 550.05 460.82 653.96 760.44 2400.3 2704.0 True False 2352.0439215437395 1796.1909794165374 1842.8894695361132 1543.4265556522478 526.1974722687233 608.2559259063602 544.5450290493035 746.6608326685056 588.2015541731492 1858.07056291925 2032.5221733965116 1.15720455714059 0.883725158291855 0.9067007945386857 0.7593651748817358 0.25888892094564664 0.2992616434239999 0.26791591067335024 0.3673567956312988 0.2893949015031979 0.9141698856914616 1.0 10.989055375842929 -3.8847295619825517 11.858456602099082 0.6272567682881043 0.8744632767022976 0.0 0.3326913809116295 0.0 0.0 0.049884611644604004 0.0 0.000130397852165047 3.8847295619825517 0.24720650841419334 KS(ph)ESDKDVK ddPTM_A549_PD325901_60min_R1 2 KSESDKDVK 9 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 KS(0.5)ES(0.5)DKDVK;KS(0.56)ES(0.44)DKDVK 65.395 0.0019175000000000002 19981600.0 3908.1 3391.2 3557.1 3441.8 3398.1000000000004 2640.3 2404.0 3021.1 2968.1 3853.7 4034.0 True False 4304.847435008838 3676.9883254174338 3798.5061965799555 3654.392169105062 3159.4291788085943 2618.7982721886765 2495.4855355192776 2960.8417904929 2843.361078845784 3610.3767243234415 3537.8435736329184 1.216799823229127 1.0393303855550717 1.0736783912351924 1.0329433998554274 0.893038121401241 0.7402244383291094 0.7053690994474154 0.8369057955415733 0.8036989255367251 1.0205020796371844 1.0 11.788654545089237 -6.646744145391014 2.663278940455896 0.8699902793943954 1.1005749439043568 0.5707317537707244 0.09865463384414144 0.19265990385596196 2.7587753602057266 0.01647517490425687 0.03774902367229208 2.2555676366231563e-07 6.646744145391014 0.2305846645099614 KS(ph)ESEVEEAAAIIAQRPDNPR ddPTM_A549_PD325901_60min_R1 1 KSESEVEEAAAIIAQRPDNPR 21 2 Q16643;Q16643-3;Q16643-2;D6R9W4;D6R9Q9 Q16643 DBN1 Drebrin 1 KS(0.5)ES(0.5)EVEEAAAIIAQRPDNPR 69.248 0.00017729 4810000.0 1092.5 721.94 1143.3 1347.4 1506.6 1170.7 916.92 1083.7 1273.8 1086.0 1357.1 True False 1203.4097957440079 782.7804174486502 1220.8912132214066 1430.6258378325765 1400.7816134878394 1161.1662073443479 951.8138923578757 1062.0847533537958 1220.2666157588228 1017.4297746620806 1190.1853033656996 1.011111288587509 0.6576962555620894 1.025799268205442 1.2020194114201714 1.176944135948074 0.9756180017184809 0.7997190770767052 0.892369238933088 1.0252744781069443 0.8548498891600431 1.0 10.216970493014214 -5.816024582159327 24.99615899299085 1.011983756126723 0.8344011013946847 0.15688003840017317 0.1387166063345448 87.2650742770953 39960.94101261616 0.01792922931451012 0.055744317717614456 1.5274795966064532e-06 5.816024582159327 -0.17758265473203838 KS(ph)ESPFRETEPLVS(ph)PHQDK ddPTM_A549_MK2206_60min_R1 1 KSESPFRETEPLVSPHQDK 19 2 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 2 KS(0.482)ES(0.482)PFRET(0.054)EPLVS(0.981)PHQDK 59.691 0.0010405999999999998 6133400.0 1925.8 1935.6 1828.7 1703.5 2653.7 2458.5 1888.6 2044.8 3201.7 2432.9 3111.6 True False 2250.827958710461 2034.113772383953 2088.0371579558173 2120.8575764730213 2263.344245335133 2718.6568381797774 2231.73417356563 2334.6566619373657 2476.5200620642922 1883.306200277567 2338.903844208797 0.9623430925916793 0.8696867882878064 0.8927417700928005 0.9067741633433689 0.9676944398288317 1.162363662324666 0.9541795311899962 0.9981841142029213 1.0588379116979252 0.8052089037096138 1.0 11.191616836247833 -6.977110861804313 5.607643760398223 1.0296335694333667 0.9067398561939255 0.13013161032226106 0.08590510289803163 0.10126727243052032 9.681634105857288 0.007547207289605206 0.014188384306531176 1.0541177787289846e-07 6.977110861804313 -0.1228937132394412 KS(ph)FTPDHVVYAR ddPTM_A549_PD325901_60min_R1 3 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KS(0.804)FT(0.196)PDHVVYAR;KS(0.959)FT(0.041)PDHVVYAR;KS(0.883)FT(0.117)PDHVVYAR 64.39399999999999 0.0014274000000000001 7430200.0 3945.77 3971.42 3283.0299999999997 3508.3 5129.83 4688.4 4381.19 4783.969999999999 4565.4400000000005 3986.7799999999997 4343.1900000000005 True False 4346.341665677651 4306.105501099704 3505.8361582631615 3724.9997230726017 4769.528437752769 4650.219224834067 4547.9185829291555 4688.549965398138 4373.570433545265 3735.054030411867 3809.0051637498136 1.1410700376680116 1.130506606313055 0.9204072999501544 0.9779455692324366 1.2521716912185434 1.2208487583818637 1.193991183370282 1.2309119478279855 1.1482185624657066 0.9805851842781057 1.0 11.895198528381455 -5.548175391282166 24.999162181704605 1.0965088329806725 1.1384299044628978 0.010602774491663691 0.11190924060130399 868.1556333890383 857944.8481674002 0.0165428664178098 0.064074171257988 2.8302487595171775e-06 5.548175391282166 0.04192107148222535 KS(ph)GIPTSEPGSQ ddPTM_A549_MK2206_60min_R1 2 KSGIPTSEPGSQ 12 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KS(0.997)GIPT(0.003)SEPGSQ;KS(0.978)GIPT(0.02)S(0.002)EPGSQ 126.95 3.7863e-07 8962700.0 5480.5 5618.4 5981.4 6393.9 7431.9 5353.9 5223.1 5487.4 8824.7 8008.799999999999 8525.2 True False 6405.474414639461 5904.35256187332 6829.652461637728 7960.405787033074 6338.677354978395 5920.44614436881 6172.069661098509 6265.2557544576985 6825.919540150163 6199.606517646834 6408.157556449683 0.9995812927839889 0.9213806792142161 1.0657747412536414 1.2422300352183264 0.9891575385187965 0.9238921003760274 0.963158225547442 0.9777000174023254 1.0651922147700645 0.9674553821491253 1.0 12.645693904180593 -4.214837321661655 15.176759938380176 1.0221366437828263 1.0227297807099387 0.0 0.0866195577322293 0.0 0.0 0.011299802796719667 0.0 6.0976526077568796e-05 4.214837321661655 0.000593136927112381 KS(ph)GIPTSEPGSQ ddPTM_A549_PD325901_60min_R1 1 KSGIPTSEPGSQ 12 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KS(0.992)GIPT(0.008)SEPGSQ 139.78 4.4841e-09 6425000.0 2344.9 2613.7 2661.0 2569.0 2499.1 2356.7 3038.0 2988.0 2548.9 2411.6 3102.2 True False 2582.952521775858 2833.965671780947 2841.5914618929082 2727.6812953776816 2323.5718374269604 2337.5078165613954 3153.61275245739 2928.401995959347 2441.7785970385157 2259.3311644337696 2720.649066466047 0.9493883476603441 1.0416505776917753 1.0444535081417017 1.0025847614814833 0.85405055215193 0.8591728515716553 1.1591398506069495 1.0763615315381923 0.897498551773983 0.8304382922008018 1.0 11.409735161602265 -6.54174035482632 24.99227703477389 0.9620825556366204 1.0162639006009235 0.0672484486190904 0.09676733951637549 549.6785649689098 728340.854170329 0.013482846025826811 0.028070267556168597 2.872497406009815e-07 6.54174035482632 0.05418134496430316 KS(ph)GLQTDYATEK ddPTM_A549_MK2206_60min_R1 2 KSGLQTDYATEK 12 1 P46013 P46013 MKI67 Antigen KI-67 1 KS(0.997)GLQT(0.002)DY(0.001)ATEK;KS(0.997)GLQT(0.003)DY(0.001)ATEK 73.983 0.0005706 8190800.0 3499.5 3513.0 3759.6 3177.7 5374.0 3918.0 3544.8 3785.6 5726.5 5241.7 5896.9 True False 4090.130045439429 3691.796694763808 4292.767812681517 3956.236642652375 4583.491718894752 4332.6001594420895 4188.84427536559 4322.220392913777 4429.456893341401 4057.596329481245 4432.536983839458 0.9227514762655321 0.832885705911466 0.9684674551690096 0.8925445308355865 1.0340560576495264 0.9774538092379765 0.9450218442931565 0.9751120878792702 0.9993051179247265 0.915411725671956 1.0 12.113916953277124 -6.402653499009012 1.2843482298028095 0.9937980906439612 0.8852058678173121 0.2791576783146976 0.04628184899650068 0.2606085529245692 0.7989955774356692 0.00550757318034918 0.021153507064713275 3.956821884128112e-07 6.402653499009012 -0.10859222282664904 KS(ph)GLQTDYATEK ddPTM_A549_PD325901_60min_R1 2 KSGLQTDYATEK 12 1 P46013 P46013 MKI67 Antigen KI-67 1 KS(0.997)GLQT(0.003)DYATEK;KS(1)GLQTDYATEK 94.882 0.000109 9964500.0 3420.4 3626.9 4482.5 3732.8 4216.0 3880.8 3813.6 4260.5 3936.6 4409.1 4929.6 True False 3767.6364900346025 3932.5515916066574 4786.7094054622185 3963.3665781961104 3919.8827044104137 3849.196051475141 3958.728634881991 4175.520985202407 3771.158391895257 4130.708673538288 4323.29045130908 0.8714742931263786 0.9096200303673542 1.107191260770559 0.9167477001217936 0.9066896495986025 0.8903394520508368 0.9156749192465891 0.9658201391345501 0.8722889276970418 0.9554548138877695 1.0 12.077914048628264 -5.525173056079284 24.996753333566826 0.9422689173910923 0.8810106678502554 0.12105144589293049 0.061474350521907806 111.8082600752273 1218191.6381019468 0.009268845711825567 0.03637185864434613 2.9841932515364856e-06 5.525173056079284 -0.06125824954083692 KS(ph)HTFLPK ddPTM_A549_MK2206_60min_R1 1 KSHTFLPK 8 1 P09543 P09543 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase 1 KS(0.854)HT(0.146)FLPK 42.395 0.017534 1315200.0 482.75 555.33 482.07 486.85 685.95 423.68 499.25 272.05 747.04 766.63 559.75 True False 564.2263978956669 583.59392499379 550.4347748322634 606.1282718555271 585.0476636724701 468.5135363839771 589.9572626033256 310.6139206181829 577.8366327777462 593.4477505523415 420.7486266859092 1.341005916857964 1.3870370287136922 1.3082271454284877 1.4405947718232357 1.3904921527152385 1.1135236259100725 1.402160875129205 0.7382410801070959 1.3733535800916683 1.4104567737433236 1.0 8.716814752413343 -7.256604987221456 24.418327715838938 1.1588029810920484 1.3743294549910332 0.22066223119250417 0.18660102448658197 343.4717570670486 1734858.3470257341 0.02753923693272821 0.04671954090574477 5.538536380615996e-08 7.256604987221456 0.21552647389898483 KS(ph)HTFLPK ddPTM_A549_PD325901_60min_R1 2 KSHTFLPK 8 1 P09543 P09543 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase 1 KS(0.975)HT(0.025)FLPK;KS(0.985)HT(0.015)FLPK 52.79 0.0058149 5298700.0 1270.37 1813.48 1408.69 1298.04 1730.41 1584.9299999999998 1667.46 1248.6 1277.7800000000002 1562.31 1504.77 True False 1399.3370272030347 1966.3083240086146 1504.2921745411204 1378.2169827372688 1608.8719711904237 1572.0228555618662 1730.9161027691237 1223.6956934922496 1224.0793501996448 1463.6654799745077 1319.6928295229552 1.0603505572648064 1.4899742425056588 1.1398805395380487 1.0443467994256428 1.2191260990423063 1.1912036046525492 1.31160529484336 0.9272579695190079 0.9275486861909578 1.1090955768120647 1.0 10.365986452962545 -8.271179179559917 24.783500443440325 0.9619412513982032 1.2097689506261806 0.4076664271065392 0.12408987624114184 355.92324151468983 905666.4081069583 0.01836590941464888 0.022343946394387495 5.355756461683242e-09 8.271179179559917 0.24782769922797743 KS(ph)KS(ph)PTLR ddPTM_A549_PD325901_60min_R1 1 KSKSPTLR 8 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 KS(0.988)KS(0.645)PT(0.367)LR 60.641000000000005 0.0035448 17860000.0 2663.1 2875.9 2924.4 2711.9 3395.8 2773.9 3010.6 2938.8 2965.6 2799.5 3061.6 True False 2933.455951529399 3118.2621859719293 3122.867369845779 2879.4079038282352 3157.2907228740232 2751.3102780836152 3125.170030463532 2880.1833285559987 2840.9661451518 2622.7390922343398 2685.0426090814412 1.0925174675469826 1.1613455128887855 1.1630606379517079 1.0723881602807364 1.1758810501536656 1.0246803044309394 1.1639182260622147 1.0726769544790633 1.0580711589242529 0.9767960789015502 1.0 11.390729267257408 -9.029845935634718 0.3768367632659727 0.9937840764342876 1.139294358878098 0.5555257472680442 0.04495294967014877 0.5642485824608503 0.21492144034596 0.02915422989954717 0.021257714655505196 9.335854280469054e-10 9.029845935634718 0.14551028244381037 KS(ph)KSPIPGQGYLGTER ddPTM_A549_MK2206_60min_R1 1 KSKSPIPGQGYLGTER 16 2 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KRE4 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 KS(0.5)KS(0.5)PIPGQGYLGTER 63.225 0.00070311 12252000.0 1548.5 1997.5 2083.2 2182.2 2251.4 1484.4 1829.2 1594.1 2895.7 2176.6 2406.2 True False 1809.8489428098176 2099.1642179876744 2378.629084843636 2716.8390979626793 1920.2220424115465 1641.4782227350258 2161.5419624516844 1820.0685567265032 2239.828573482703 1684.904548285647 1808.67413225839 1.000649542408151 1.1606094102570956 1.315123074090508 1.5021164119654404 1.061673857199402 0.9075588540017454 1.1950975158541621 1.006299876945708 1.238381493677888 0.9315688869734655 1.0 10.820716786527496 KS(ph)KSPIPGQGYLGTER ddPTM_A549_PD325901_60min_R1 2 KSKSPIPGQGYLGTER 16 2 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KRE4 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 KS(0.5)KS(0.5)PIPGQGYLGTER;KS(0.5)KS(0.5)PIPGQGYLGTER 84.181 2.593e-05 44717000.0 4029.7 3805.6000000000004 3495.4 4375.5 5015.2 3690.7 4774.1 4356.3 4554.799999999999 4027.2 4220.5 True False 4438.7921774916485 4126.31126775436 3732.618863547714 4645.764697518504 4662.949653500739 3660.6441628476864 4955.7809879877595 4269.410179048764 4363.377595743666 3772.9219047137467 3701.4052559538227 1.1992180997613586 1.1147958633054469 1.008432907351521 1.2551353813651318 1.2597782007253173 0.9889876708202727 1.3388917573984194 1.153456561445491 1.178843518613651 1.0193214857100252 1.0 11.8538573853765 -10.65038036796367 0.8605810113163996 0.9971571849774248 1.1652998820999425 0.27046379689185995 0.09881288295794823 0.6464600798044339 0.8306881487275235 0.0696870368103428 0.01746287493864392 2.2367612587080015e-11 10.65038036796367 0.16814269712251773 KS(ph)KSPT(ph)LR ddPTM_A549_PD325901_60min_R1 1 KSKSPTLR 8 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 KS(0.886)KS(0.39)PT(0.724)LR 42.629 0.038162 29742000.0 2237.0 2253.5 2039.4 2103.8 2377.1 2085.0 2352.1 2276.3 2345.3 2209.9 2034.9 True False 2464.098593207638 2443.4103536589364 2177.8059479084545 2233.7469479235356 2210.140696549811 2068.020451279547 2441.610452618506 2230.897410777197 2246.7351970004447 2070.366536856108 1784.6202002939065 1.3807411755183703 1.3691486587771082 1.2203190054386894 1.251665170861376 1.2384375656993158 1.1588014362602015 1.368140096260482 1.250068451769062 1.2589430494121008 1.1601160496306957 1.0 10.801401359782753 -14.236348712275689 0.216747027620252 2.475122914136271e-15 1.3160425485820588 0.4074271070678115 0.08187681727474633 12.99324246252741 0.21255107839007542 5.556955019631316 0.04889669294850026 5.802982858840933e-15 14.236348712275689 1.3160425485820564 KS(ph)LEGTK ddPTM_A549_PD325901_60min_R1 1 KSLEGTK 7 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 KS(1)LEGTK 64.297 0.010825 160460000.0 2672.4 2607.5 2517.9 2453.8 2463.7 2520.7 2154.6 2277.4 2726.1 3223.3 3160.0 True False 2943.7000806830997 2827.2431760220447 2688.7798353627036 2605.365653015863 2290.65821130359 2500.1722549354204 2236.594482042359 2231.975470414261 2611.531497268116 3019.780287908181 2771.340032890436 1.0621937567195234 1.0201718816414251 0.9702092862846483 0.9401104238726469 0.8265525645059488 0.902152830494714 0.8070444101042515 0.8053777031778986 0.9423352841132079 1.0896462549052952 1.0 11.43636801954074 -5.7598428944074085 1.9475790247641467 0.9314905984676368 1.0587863219477103 0.2539367830123974 0.08165787355344387 0.4574409146133867 3.141969212213175 0.011787033999546784 0.07326777065808604 1.738429590173652e-06 5.7598428944074085 0.12729572348007345 KS(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_A549_MK2206_60min_R1 4 KSLPEEDVAEIQHAEEFLIKPESK 24 2 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK 248.06 8.390799999999999e-102 37092400.0 8956.0 10092.4 8856.0 6799.900000000001 12923.1 11948.699999999999 9544.4 10880.5 14277.800000000001 13191.8 14304.5 True False 10467.553846822564 10606.060051874252 10111.913966673981 8465.875805259107 11022.129109127054 13213.103503094853 11278.493935285298 12422.844195133757 11043.90109696148 10211.763217897002 10752.297865884027 0.9735178449655001 0.986399389615705 0.9404421355139425 0.7873550296742141 1.025095216539636 1.2288632316463923 1.0489380108293724 1.155366448185016 1.027120084907867 0.9497284529568244 1.0 13.392357389639008 -6.971895723343905 24.99820268431459 1.0449185701756012 0.9251521322209716 0.36866275696807416 0.08673808273579782 211.57137595932383 188187.69087650918 0.012693164370598819 0.02398751004937109 1.0668522479715516e-07 6.971895723343905 -0.1197664379546296 KS(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_A549_PD325901_60min_R1 3 KSLPEEDVAEIQHAEEFLIKPESK 24 2 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK 239.41 2.3077999999999997e-99 53955600.0 11410.3 12142.199999999999 12933.4 10866.2 15295.5 12199.1 11074.1 11617.1 12476.6 13189.6 13859.5 True False 12568.6652561811 13165.465807054612 13811.138298852218 11537.380495069274 14221.19684661042 12099.75457419872 11495.530935480045 11385.387827061346 11952.25189054523 12356.806405048788 12154.869362609174 1.0340436315049872 1.0831433406889783 1.1362638204354596 0.949198230839122 1.1699999746897887 0.9954656206688656 0.9457552025069569 0.9366935577345727 0.9833303455578688 1.0166136744390535 1.0 13.569246767286415 -7.4907205916696435 24.784445237241876 0.983156665575012 1.0726009130091712 0.41063966890716075 0.05666998648850838 450.960048874236 347557.3579755953 0.007716339630366649 0.012328102646155616 3.2305718786952676e-08 7.4907205916696435 0.08944424743415913 KS(ph)LSDSESDDSK ddPTM_A549_MK2206_60min_R1 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.845)LS(0.153)DS(0.002)ESDDSK 102.03 9.0949e-05 691980000.0 10936.0 11797.0 10779.0 9831.5 14815.0 11284.0 10038.0 10746.0 15361.0 17015.0 15274.0 True False 12781.729440470253 12397.416910938979 12307.624282608276 12240.21794135281 12635.733125311835 12478.065390287009 11861.774666023412 12269.27840824479 11881.75802647643 13171.299682569283 11481.044259045248 1.1132897976941662 1.0798161413907776 1.0719951952899942 1.066124096831127 1.1005735053548702 1.086840631282844 1.033161653102958 1.0686552661425845 1.0349022056173578 1.1472214012407784 1.0 13.486966247941957 -8.821000517819654 0.3571945971719792 0.9954582657650574 1.0950378666789802 0.0 0.04677011068826438 0.3593063687689198 0.12928255545269826 0.011927814451136814 0.010402759780850309 1.5100783536606912e-09 8.821000517819654 0.09957960091392282 KS(ph)LSDSESDDSKSK ddPTM_A549_MK2206_60min_R1 1 KSLSDSESDDSKSK 14 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.452)LS(0.452)DS(0.094)ES(0.002)DDSKSK 45.618 0.0089658 26977000.0 1670.1 2269.1 2833.8 1868.1 2983.9 1623.1 1932.4 1489.1 2954.8 3568.4 3679.6 True False 1951.9720499752532 2384.587497890279 3235.675451531247 2325.7845838621965 2544.972262748429 1794.855364673417 2283.4920666092485 1700.1844851774908 2285.542517846011 2762.2959616385674 2765.8537682062893 0.705739425711268 0.8621524121417059 1.169864975771892 0.8408921001526822 0.920139846872271 0.6489335717258169 0.8256011553677106 0.6147051245880197 0.8263425001417303 0.9987136678704351 1.0 11.433509167303608 -4.409597275892715 16.60203385042654 0.875302059208412 0.8563469622235107 0.0 0.1577359296448401 0.0 0.0 0.020978795986709636 0.0 3.894060764173203e-05 4.409597275892715 -0.018955096984901276 KS(ph)NFSNSADDIK ddPTM_A549_MK2206_60min_R1 2 KSNFSNSADDIK 12 1 P45973 P45973 CBX5 Chromobox protein homolog 5 1 KS(0.999)NFS(0.001)NSADDIK;KS(1)NFSNSADDIK 173.37 3.5224000000000003e-16 30429000.0 7554.4 8179.1 8059.5 7571.6 10146.0 8672.3 8256.8 8074.7 12177.1 11727.3 11511.7 True False 8829.398032652558 8595.381254239299 9202.458289793247 9426.642339902042 8653.53684032493 9589.997029793163 9756.953682249654 9219.313452731638 9419.006292832895 9078.094785036423 8653.027183242837 1.0203825604236254 0.9933380621853155 1.0634958257861966 1.0894039901038752 1.000058899281292 1.108282318627732 1.1275769133309375 1.0654437178454093 1.0885215189284771 1.0491235717618868 1.0 13.078989219519267 -5.765595184530806 24.93150708326045 1.0557823044114063 1.006860306622548 0.2205881877131889 0.039187938061147676 137.80176117498033 826727.4622117516 0.006501973707580152 0.02134644437563202 1.7155556697514728e-06 5.765595184530806 -0.048921997788858196 KS(ph)NFSNSADDIK ddPTM_A549_PD325901_60min_R1 4 KSNFSNSADDIK 12 1 P45973 P45973 CBX5 Chromobox protein homolog 5 1 KS(0.586)NFS(0.413)NS(0.001)ADDIK;KS(0.355)NFS(0.355)NS(0.291)ADDIK;KS(0.732)NFS(0.267)NS(0.002)ADDIK;KS(1)NFSNSADDIK 153.21 3.3298e-13 34181400.0 9943.9 9979.2 11816.599999999999 12147.6 13126.1 11538.8 11791.3 13444.5 13693.7 13579.5 13797.7 True False 10953.39740768772 10820.182206005451 12618.545534988252 12897.929662798717 12204.168018586708 11444.83183847694 12240.024373946942 13176.338900493782 13118.201410124493 12722.088052508027 12100.670370826694 0.9051893053871697 0.8941803945086918 1.0427972292683962 1.065885547456455 1.008553050747464 0.9458014711374253 1.0115162217339806 1.0888933006769939 1.0840888155875188 1.0513539880550336 1.0 13.562799353816029 -5.760957316818599 24.99995962609805 1.0354098164598937 0.899684803013223 0.6300646847840532 0.039432325144886905 6.502958584354066 337139.0871092507 0.006412724535536949 0.02214426211093676 1.7339744072582502e-06 5.760957316818599 -0.13572501344667076 KS(ph)PAKS(ph)PNPST(ph)PR ddPTM_A549_PD325901_60min_R1 2 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 3 KS(0.969)PAKS(0.908)PNPS(0.222)T(0.9)PR;KS(1)PAKS(0.998)PNPS(0.199)T(0.803)PR 59.281000000000006 0.0039752 33988000.0 3443.6000000000004 3195.1 2695.2 2853.7 3827.1 2938.5 3227.1 2818.3 2943.0 2833.1 3451.5 True False 3793.1917369556672 3464.362290204424 2878.1124795542173 3029.96656777707 3558.2976987782486 2914.569830256571 3349.9090564368785 2762.08679558642 2819.3159445581837 2654.2175825001277 3026.987380861182 1.2531243971940509 1.1444918178743144 0.9508174687980994 1.0009842085681375 1.175524457510592 0.9628615727586456 1.1066808793513454 0.9124870533158954 0.9313933590816902 0.8768512215419277 1.0 11.56366694542152 -2.0000000000000004 0.4841255539407855 0.9757085051408366 8.736523804950412 0.49126146087510414 0.08313420595365853 52.29479959016121 0.5167568553799708 0.01480821362827131 412.4642573393258 0.00999999999999999 2.0000000000000004 7.760815299809575 KS(ph)PAKS(ph)PNPSTPR ddPTM_A549_PD325901_60min_R1 1 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 2 KS(0.998)PAKS(0.427)PNPS(0.426)T(0.149)PR 72.21 0.0005805 37519000.0 5676.8 5814.6 6721.1 5554.0 7776.4 5633.2 5940.3 6064.2 6010.1 7070.3 6338.6 True False 6253.104556960719 6304.616748340477 7177.234263257588 5897.057965950816 7230.212491123615 5587.325086881508 6166.3613671568855 5943.244773727133 5757.516397685744 6623.880051375052 5558.992383695984 1.124862947339252 1.1341294092849166 1.2911034532638972 1.0608141833844469 1.300633638630117 1.00509673358586 1.109258826337352 1.0691226689135473 1.035712229894758 1.1915612748098532 1.0 12.440607690131843 -7.909064672602836 0.7473375276069382 1.0124678583355342 1.1782329526637534 0.08897702750443859 0.09464707346001192 0.39437777311378913 0.44559601889086625 0.014953358912815408 0.025283336927448385 1.2329212201162826e-08 7.909064672602836 0.16576509432821918 KS(ph)PAKSPNPS(ph)T(ph)PR ddPTM_A549_PD325901_60min_R1 1 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 3 KS(0.993)PAKS(0.01)PNPS(0.999)T(0.998)PR 82.007 0.00027037 13383000.0 2712.8 2156.1 2262.3 2121.8 2736.6 1766.8 2662.3 2419.5 2284.7 2462.5 2165.7 True False 2988.201458942191 2337.802113833609 2415.8332823150417 2252.8587670425723 2544.3906567574804 1752.4117665806739 2763.61528336646 2371.2411744389683 2188.682004258266 2307.0173297471206 1899.3326295034235 1.5732902244318574 1.2308544999012745 1.2719379664143695 1.186131766520316 1.339623516825858 0.922646059652457 1.4550454409289022 1.2484601894397636 1.1523426546041553 1.214646288865308 1.0 10.891276870987685 -2.0000000000001363 0.030469759496592995 4.199557663207248e-15 3.0378465730378497 0.17749507824166233 0.15892524168737604 746.7155987821474 1.6964587081465752 53.00215834665137 133.41330116412342 0.00999999999999686 2.0000000000001363 3.0378465730378457 KS(ph)PAKSPNPS(ph)TPR ddPTM_A549_PD325901_60min_R1 3 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 2 KS(0.993)PAKS(0.255)PNPS(0.448)T(0.303)PR;KS(0.983)PAKS(0.037)PNPS(0.567)T(0.412)PR;KS(0.998)PAKS(0.024)PNPS(0.57)T(0.408)PR 48.547 0.010198 56948000.0 6961.299999999999 7586.9 7994.0 7297.5 8890.4 8232.300000000001 8669.5 9362.5 8428.8 8601.6 9960.5 True False 7668.006051361796 8226.274689227863 8536.520911827103 7748.250001175021 8265.968974214979 8165.258878210366 8999.422566632433 9175.757592760834 8074.5668479415635 8058.493508041761 8735.42164481176 0.8778060594151245 0.9417146674440957 0.9772305515323589 0.886992101380355 0.9462587280059224 0.9347297944181054 1.0302218865390969 1.0504080931468949 0.9243476933637543 0.9225076745812208 1.0 13.09266162606374 -7.556714914331721 24.998994146488233 0.9759893195488176 0.9288465728334531 0.28709315615984354 0.0444662211507255 237.5161476356413 175481.96927037108 0.007229590966702035 0.010723238623369644 2.7751412039395268e-08 7.556714914331721 -0.04714274671536456 KS(ph)PAKSPNPST(ph)PR ddPTM_A549_PD325901_60min_R1 1 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 2 KS(0.992)PAKS(0.009)PNPS(0.147)T(0.852)PR 97.095 8.119e-05 23722000.0 4008.5 3772.5 4616.0 3654.1 4528.6 3633.0 3852.7 3796.1 4514.6 4723.4 4303.8 True False 4415.439969098264 4090.421814589903 4929.269518262932 3879.805457936777 4210.526758821871 3603.414052517312 3999.3166067783363 3720.3838075171593 4324.867061944399 4425.1637178995115 3774.4598840360313 1.1698203464218122 1.0837105017038924 1.3059536118296382 1.027910105587902 1.1155309337450299 0.9546833621832483 1.0595732183280924 0.985673161676036 1.145824090020482 1.172396542513437 1.0 11.882054497742853 -6.304432005859859 24.999761329088237 1.0566143969266522 1.1762166160559515 0.33967041635470197 0.07961584728839573 393.6009133435846 228874.11890117364 0.010769060231194031 0.025025247242126025 4.960985916494802e-07 6.304432005859859 0.11960221912929936 KS(ph)PAKSPNPSTPR ddPTM_A549_MK2206_60min_R1 1 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KS(0.992)PAKS(0.007)PNPSTPR 42.813 0.026041 18348000.0 765.53 1336.8 1136.0 987.27 1712.4 1430.0 865.2 890.83 1764.9 1812.3 2044.2 True False 894.7327485884405 1404.8374100655444 1297.1018819039791 1229.1511943202343 1460.5082284025632 1581.321650842825 1022.3956406698001 1017.1078805524565 1365.1529679661642 1402.9001713029868 1536.5687229501307 0.5822926988065987 0.9142691694051477 0.8441548122973713 0.799932457274237 0.9504997769305525 1.0291252367852257 0.6653757982961247 0.6619345203120256 0.8884425067205212 0.9130084130630309 1.0 10.585496577490886 -9.54493025434555 1.407883473793889 0.9727092287631407 0.8200063197750762 0.15019287826358618 0.12947750048014 0.42542936291320416 1.721532654574747 0.0317932547467216 0.02460420210016337 2.85147616441703e-10 9.54493025434555 -0.1527029089880645 KS(ph)PAKSPNPSTPR ddPTM_A549_PD325901_60min_R1 4 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KS(0.999)PAKS(0.001)PNPSTPR;KS(1)PAKSPNPSTPR;KS(0.903)PAKS(0.097)PNPSTPR;KS(1)PAKSPNPSTPR 122.31 2.0196e-06 256746000.0 15747.899999999998 18508.2 19016.9 19241.4 22463.1 26356.9 22488.4 26215.6 22936.5 19154.0 26221.800000000003 True False 17346.61521500875 20067.95096853354 20307.501191909538 20429.897577610005 20885.369349488054 26142.25814500236 23344.20836812467 25692.709292259657 21972.55866882732 17944.613171157904 22996.684833685587 0.7543093859163298 0.8726453883969383 0.8830621169431809 0.8883844660811393 0.9081904413846262 1.136783772707496 1.0151118970822277 1.1172353527507115 0.9554663564655144 0.7803130451599963 1.0 14.489138279035465 -7.021776588609172 13.234039421020602 1.0036645012106393 0.8592014569210635 0.36695414138433446 0.09321362087472353 1.2861409125796999 781.7969326146109 0.010046455426714174 0.017686475484069236 9.510939331294054e-08 7.021776588609172 -0.1444630442895758 KS(ph)PDKTESSLQVITVTSEQCNTNALTNTQTK ddPTM_A549_MK2206_60min_R1 2 KSPDKTESSLQVITVTSEQCNTNALTNTQTK 31 2 J3KNV1;O60281-2;O60281 J3KNV1 ZNF292 Zinc finger protein 292 1 KS(0.573)PDKT(0.141)ES(0.141)S(0.141)LQVIT(0.001)VT(0.001)S(0.001)EQCNTNALTNTQTK;KS(0.455)PDKT(0.181)ES(0.181)S(0.181)LQVITVTSEQCNTNALTNTQTK 77.825 2.5274e-06 9690100.0 1101.8999999999999 1196.46 984.68 879.31 1770.2199999999998 1332.43 1066.02 858.91 1874.17 1428.63 1438.96 True False 1287.8737811315077 1257.3547035061495 1124.3224305221931 1094.7409894737257 1509.8229829962538 1473.4268582045484 1259.702035213615 980.6631228015572 1449.673487434498 1105.9014907733738 1081.6265187243507 1.1906825127127993 1.1624666016778593 1.039473802702431 1.0121247681360863 1.3958819951797314 1.362232556892447 1.1646367885832563 0.9066559536263332 1.340271768802613 1.0224430259694932 1.0 10.078986713032311 -4.204342553258686 2.7626180862767518 1.1586422334066175 6.497327968549553 0.0 0.15772931249113073 4098.697717341023 208.99933608408338 0.023619058580413212 136310.967032621 6.246797772170997e-05 4.204342553258686 5.338685735142935 KS(ph)PDKTESSLQVITVTSEQCNTNALTNTQTK ddPTM_A549_PD325901_60min_R1 1 KSPDKTESSLQVITVTSEQCNTNALTNTQTK 31 2 J3KNV1;O60281-2;O60281 J3KNV1 ZNF292 Zinc finger protein 292 1 KS(0.915)PDKT(0.059)ES(0.013)S(0.013)LQVITVTSEQCNTNALTNTQTK 122.35 8.7622e-22 4941500.0 1216.2 950.06 1405.0 858.6 1043.8 815.02 469.37 1017.3 811.43 1018.1 998.8 True False 1339.6677286808806 1030.1248904358595 1500.3517489513479 911.6337719779201 970.4870889145137 808.3827473390196 487.2321321991193 997.0091534435884 777.3284189238346 953.8169922499669 875.9539319148632 1.5293814889926052 1.1760035007594218 1.7128203827700517 1.0407325531207556 1.1079202382173203 0.9228598878160968 0.5562303158272426 1.1381981598782194 0.8874078768327119 1.0888894466914403 1.0 9.774711187517125 -6.424428732728399 5.452728025268334 0.9421368537232759 1.4416907591515167 0.5840882966277297 0.18980180412772088 0.11147198672485281 4.958182690728263 0.024369208698934785 0.05731314089585152 3.763321029066697e-07 6.424428732728399 0.49955390542824074 KS(ph)PEIHR ddPTM_A549_MK2206_60min_R1 2 KSPEIHR 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(1)PEIHR;KS(1)PEIHR 81.335 0.006466899999999999 114477000.0 4176.299999999999 4999.1 3935.2 3725.7 4668.799999999999 4032.2999999999997 3444.7999999999997 4320.4 4646.2 5616.0 5613.6 True False 4881.157339268094 5253.532837117491 4493.2705331589295 4638.496667253028 3982.0257047219593 4458.995309575886 4070.675569786555 4932.829930670087 3593.843118456792 4347.341699518607 4219.588192521693 1.1567852398295382 1.2450344909079614 1.0648599645629588 1.0992770990007414 0.943700077599809 1.0567370809972618 0.9647092047989296 1.1690311247463583 0.8517047054084808 1.0302762973939803 1.0 12.042886491746966 -6.0044363523839985 0.468412289518187 0.9431821991203198 1.2929556277724126 0.31188580553101275 0.08913063466081525 1.6567574446250521 0.3689200940382363 0.020505866265803346 0.2811702038230181 9.898369178506606e-07 6.0044363523839985 0.3497734286520928 KS(ph)PEIHR ddPTM_A549_PD325901_60min_R1 4 KSPEIHR 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(1)PEIHR;KS(1)PEIHR;KS(1)PEIHR;KS(1)PEIHR 76.282 0.0074241 188060000.0 15448.0 16030.8 15113.999999999998 15547.5 16996.3 14752.8 15330.1 15861.1 15431.7 17190.199999999997 17773.499999999996 True False 17016.269587783467 17381.771776097485 16139.726927865253 16507.83376406558 15802.538522051891 14632.658088075248 15913.495344452605 15544.737917707756 14783.159314182301 16104.807838302117 15587.472175499408 1.0916631892713087 1.1151116473791292 1.0354293977976676 1.059044954704895 1.0137973844720332 0.9387447767878009 1.0209157177817225 0.997258422834023 0.9484000450963861 1.0331891955910506 1.0 13.928099364316193 -6.420469755215844 0.9404869457937644 0.9774989297103562 1.1062554970688265 0.6052643964962163 0.03209289172639938 0.2714102224425892 0.40978349937254865 0.004725503891800485 0.02343913137232267 3.7977838626884005e-07 6.420469755215844 0.1287565673584703 KS(ph)PEIHRR ddPTM_A549_PD325901_60min_R1 2 KSPEIHRR 8 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(1)PEIHRR;KS(1)PEIHRR 51.268 0.0060734 17456900.0 1864.28 2079.62 1997.27 1917.1399999999999 2642.5 2472.8 1960.73 2271.36 2470.07 2085.7 2715.8 True False 2053.540333189601 2254.8768758270244 2132.816752760183 2035.5573836591554 2456.899916130106 2452.6623366542276 2035.3466531026263 2226.05594295255 2366.2615477998056 1954.00854605221 2381.773816874635 0.8621894819064968 0.9467216659497396 0.8954740948319209 0.8546392479577322 1.031542079572464 1.0297629100115864 0.8545507716485897 0.9346210488927038 0.9934870939612626 0.8204005486197934 1.0 11.217820700061075 -2.000000000013355 0.1440391620345293 1.0211642713735702 0.5208093212419268 0.0 0.0793525725525862 61.63131268856606 0.5609405865214429 0.11732260003723774 6.439513190148978 0.009999999999692488 2.000000000013355 -0.5003549501316434 KS(ph)PEKNER ddPTM_A549_PD325901_60min_R1 1 KSPEKNER 8 2 P19525;P19525-2 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase 1 KS(1)PEKNER 48.284 0.007351899999999999 17478000.0 4029.2 3833.5 3201.2 3295.4 3074.7 3109.1 1921.7 3234.3 2961.5 3852.4 4557.0 True False 4438.241417859733 4156.562498669422 3418.452682379398 3498.949373603585 2858.743679139162 3083.7805204188203 1994.8313450945898 3169.7893492407343 2837.0384538936646 3609.1588065453034 3996.5178892030754 1.1105270990654166 1.0400460135306089 0.8553577832379111 0.8754994899575671 0.7153086157482981 0.7716168439405486 0.4991423535182445 0.7931377857219614 0.7098775815712371 0.9030758541818981 1.0 11.964527831699515 -5.708599206406403 1.894289762202619 0.8126342566337502 1.1222809737143056 0.44067059232107786 0.12344944425599495 0.3837287148338877 2.401909265159395 0.021721203418552094 0.15314825884059063 1.956143872616918e-06 5.708599206406403 0.30964671708055536 KS(ph)PENTEGK ddPTM_A549_PD325901_60min_R1 2 KSPENTEGK 9 1 A0A087WZE9;Q15651-2;Q15651 A0A087WZE9;Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 KS(0.982)PENT(0.018)EGK;KS(0.834)PENT(0.166)EGK 60.49 0.0033722 10993100.0 4857.6 5199.1 5223.7 5135.2 5442.5 4892.4 3770.8999999999996 4740.799999999999 5463.4 5575.2 6831.8 True False 5350.739976023886 5637.246403243041 5578.2116946599 5452.3896411146225 5060.237575605712 4852.557916470049 3914.4036630156584 4646.241024914348 5233.792297485277 5223.180920530418 5991.531910348382 0.8930504011473692 0.940868960992525 0.9310159368467006 0.910015956302833 0.8445649044889224 0.8099027075344232 0.6533226763350498 0.7754679595195861 0.8735315735272375 0.8717605111155475 1.0 12.548709202017198 -10.111786621812822 1.0054230682598544 0.9862985284457699 0.8481496642909311 0.08423894323779613 0.08536638587480339 0.4607513143043024 0.9322818967475627 0.03442316486358509 0.016823440444604213 7.730603129045633e-11 10.111786621812822 -0.13814886415483885 KS(ph)PGDEDDKDCKEEENK ddPTM_A549_MK2206_60min_R1 3 KSPGDEDDKDCKEEENK 17 3 H3BPM9;Q9Y3E1 H3BPM9 HDGFRP3 Hepatoma-derived growth factor-related protein 3 1 KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK 125.09 8.0683e-11 61425000.0 15048.1 16601.9 14746.0 13066.4 11273.5 7445.4 5833.3 4712.099999999999 9168.4 20594.6 18670.9 True False 17587.85138927764 17446.865797551734 16837.20453394021 16267.668586572983 9615.183083915152 8233.267286143475 6893.135102541772 5380.054605201029 7091.772038926279 15942.265556429102 14034.400239374616 1.253195796706263 1.243150081227068 1.1997095883514926 1.1591281643039335 0.6851153536963409 0.5866490299346312 0.49115993451594303 0.3833476681181474 0.5053135095171187 1.1359420626826517 1.0 13.77667979109006 -6.728858067708868 4.838062296966015 0.6915002778364586 1.2230152165195878 0.6006841212308237 0.20813489583574601 0.11827708192123988 6.555023787766696 0.03349856168660449 0.06950167294702907 1.866989744260318e-07 6.728858067708868 0.5315149386831292 KS(ph)PGDEDDKDCKEEENK ddPTM_A549_PD325901_60min_R1 3 KSPGDEDDKDCKEEENK 17 3 H3BPM9;Q9Y3E1 H3BPM9 HDGFRP3 Hepatoma-derived growth factor-related protein 3 1 KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK 134.81 4.6416e-13 207873000.0 15281.800000000001 15979.7 18689.9 14444.0 16239.0 13318.2 15613.5 17348.7 10813.900000000001 15392.199999999999 17557.5 True False 16833.19708613343 17326.365399762017 19958.309005498784 15336.173075295927 15098.42866150871 13209.74099483513 16207.680286535033 17002.666568708137 10359.429389350234 14420.333865150722 15398.038806162605 1.093203965650252 1.1252319608928156 1.296159157457836 0.9959822330852992 0.9805423178610262 0.8578846410978213 1.0525808182824161 1.104209879111574 0.6727758982659651 0.936504580010502 1.0 13.910458991196807 -6.9084419814266695 0.7753792207329524 0.8678909147804438 1.1754774914052795 0.2877912199397098 0.12879428544827037 0.6071038403478636 0.671374841617535 0.02806618394876618 0.09931813176216012 1.2346902497600977e-07 6.9084419814266695 0.3075865766248357 KS(ph)PGDPAKPASSPR ddPTM_A549_MK2206_60min_R1 2 KSPGDPAKPASSPR 14 2 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 KS(1)PGDPAKPASSPR;KS(0.998)PGDPAKPAS(0.001)S(0.001)PR 57.52 0.0024486 9143100.0 2290.5 2336.6 2328.0 2303.1000000000004 2998.2 2481.2 2054.29 1896.4899999999998 3030.3 3369.5 3230.1 True False 2677.0804026515266 2455.5229595744695 2658.145405873647 2867.3596033900894 2557.1687516915235 2743.7589371127374 2427.527901839532 2165.3232652570387 2343.9418883947355 2608.3276097806165 2427.9770237751745 1.1025970906796434 1.011345220951253 1.0947984185371706 1.1809665311131052 1.0532096171632932 1.1300596794143318 0.9998150221640302 0.8918219752715184 0.9653888259412868 1.074280186443042 1.0 11.245539053931772 -7.873731709096112 5.717185398769493 0.9750322897321666 1.0932729092462283 0.4800246203362808 0.05646043690941586 0.11530131368097081 5.4070191366269444 0.007653305723543418 0.010641719892947425 1.3374214704112985e-08 7.873731709096112 0.11824061951406173 KS(ph)PGDPAKPASSPR ddPTM_A549_PD325901_60min_R1 2 KSPGDPAKPASSPR 14 2 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 KS(0.992)PGDPAKPAS(0.004)S(0.004)PR;KS(0.992)PGDPAKPAS(0.004)S(0.004)PR 50.831 0.005137 14242100.0 3753.6000000000004 4074.9 4226.9 4175.1 5081.0 4705.700000000001 4034.1 4923.3 4649.2 5041.5 5036.299999999999 True False 4134.662708745726 4418.306123862794 4513.762852414558 4432.98644465993 4724.128088498417 4667.378339369863 4187.619883044223 4825.100919245864 4453.810292028508 4723.178829612229 4416.867027736104 0.9361075809576672 1.0003258183046158 1.021937682087776 1.0036495137441546 1.0695653862416143 1.0567169693044076 0.9480973406597246 1.0924261221689988 1.0083641332329942 1.069350469450996 1.0 12.108807684549012 -5.271424589937234 2.9677358730646577 1.014952894281556 0.9238855293424036 0.25171361413710225 0.04113233001276439 0.3760866048001024 4.826213730253591 0.004948823312008757 0.0800815328002454 5.352730894974173e-06 5.271424589937234 -0.09106736493915235 KS(ph)PGPVR ddPTM_A549_PD325901_60min_R1 2 KSPGPVR 7 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 KS(1)PGPVR;KS(1)PGPVR 62.558 0.011372 24278000.0 5639.1 5364.200000000001 4953.3 4766.0 4833.6 4235.4 3789.3 4539.1 4317.6 5838.3 6154.5 True False 6211.577280713988 5816.259959661539 5289.460724612608 5060.3849956286585 4494.104611014749 4200.908306642393 3933.5038850845212 4448.564089644934 4136.14628685845 5469.668741629491 5397.535516589932 1.1508173057170272 1.0775769685599308 0.9799770114258362 0.9375362107530366 0.8326215913172991 0.7783011883350149 0.7287592407672826 0.8241843107788309 0.7663027457893589 1.0133641038243935 1.0 12.398085116089966 -5.913375347922143 1.3213909535390471 0.8591272307122881 1.1546306154036612 0.5845669560834821 0.0856258459496071 0.37430191098082916 1.0617388253115616 0.015292032437063206 0.10744864294424247 1.22074415091324e-06 5.913375347922143 0.29550338469137305 KS(ph)PGVEIK ddPTM_A549_MK2206_60min_R1 2 KSPGVEIK 8 1 Q9Y597-3;Q9Y597-2;Q9Y597 Q9Y597-3 KCTD3 BTB/POZ domain-containing protein KCTD3 1 KS(1)PGVEIK;KS(1)PGVEIK 89.805 0.0011089000000000001 58656000.0 9472.099999999999 9568.400000000001 7906.799999999999 7648.8 11171.5 7555.1 8552.0 8301.2 11293.0 11682.5 11170.900000000001 True False 11070.758909389006 10055.390690059214 9028.10313366055 9522.75634336768 9528.187148796564 8354.575667330504 10105.78770111896 9477.920521358801 8735.153531215312 9043.41513615138 8396.857228844347 1.3184407698822653 1.19751835907339 1.0751764484750066 1.1340857756465976 1.1347325420832386 0.9949645968293233 1.2035202487907266 1.128746180035175 1.0402884428246406 1.0769999881724819 1.0 13.03563374246326 -2.0000000000000004 0.1852641877208143 0.9946487529679201 2.1427786735864305 0.4625934795864841 0.067434478496572 27.111104019773776 0.2893625549433819 0.06332627956246116 8.937260863235188 0.00999999999999999 2.0000000000000004 1.1481299206185103 KS(ph)PGVEIK ddPTM_A549_PD325901_60min_R1 2 KSPGVEIK 8 1 Q9Y597-3;Q9Y597-2;Q9Y597 Q9Y597-3 KCTD3 BTB/POZ domain-containing protein KCTD3 1 KS(1)PGVEIK;KS(1)PGVEIK 93.62299999999999 0.0010688 78545000.0 19195.4 20224.2 19526.7 19349.9 24725.7 20721.0 21408.3 21340.2 23371.5 24218.9 26426.2 True False 21144.10287709339 21928.56431083608 20851.899285585965 20545.099376188635 22989.05213103431 20552.25504602566 22223.004571571277 20914.55296993697 22389.277131580562 22689.71452077666 23175.944929483918 0.9123296996703827 0.9461777881142205 0.899721644534055 0.8864837847475043 0.9919359146296621 0.8867925389259768 0.9588823514720933 0.9024250374072103 0.966056710943312 0.9790200395199987 1.0 14.500340541152745 -9.223499104597387 0.7576346952648247 0.9950416215634986 0.921734924810485 0.3841697345099314 0.032077136391692546 0.33290641460467574 0.4134118704097617 0.009139144897602196 0.007046309415331024 5.977242770399035e-10 9.223499104597387 -0.0733066967530136 KS(ph)PHKDLGHR ddPTM_A549_PD325901_60min_R1 1 KSPHKDLGHR 10 2 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 KS(1)PHKDLGHR 79.633 0.00031898 7098100.0 609.69 684.31 592.99 860.8 658.85 580.7 537.44 828.08 643.72 811.41 805.92 True False 671.5852799699446 741.9792052861542 633.2338673385478 913.9696609813576 612.5746489091086 575.9709717304715 557.8925732984527 811.563294783807 616.6666869966002 760.1774341239033 706.796949147804 0.9501813509236074 1.0497770345228146 0.8959204876337508 1.2931148925916347 0.8666911333554841 0.814903024729986 0.7893251010366025 1.1482269352779768 0.8724806859171149 1.0755244982883145 1.0 9.465152002359737 KS(ph)PHS(ph)KSPAEQR ddPTM_A549_PD325901_60min_R1 2 KSPHSKSPAEQR 12 2 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 2 KS(0.999)PHS(0.601)KS(0.399)PAEQR;KS(0.996)PHS(0.564)KS(0.44)PAEQR 54.233999999999995 0.006650499999999999 38156000.0 4640.4 4498.8 4102.3 4221.4 4977.4 3886.8 4018.8 4081.2000000000003 4408.8 5078.1 5503.6 True False 5111.48999191807 4877.929664539971 4380.70674713389 4482.146290504998 4627.8045950978185 3855.1471894644324 4171.7376331717405 3999.797264360537 4223.513468014989 4757.467899366033 4826.692090194875 1.0590047793398183 1.0106154636317453 0.9076002084394451 0.9286165777200083 0.9587942443022035 0.7987141332872516 0.8643057305533051 0.8286829136016106 0.8750327116566631 0.9856580470568099 1.0 12.23681908034502 -5.629371288500051 3.29517760821379 0.9163684171720635 1.0521428558511312 0.40520196176790346 0.06032240765546886 0.22415702291342574 4.574660858280024 0.009858658701088721 0.04965513324313376 2.347624923271184e-06 5.629371288500051 0.1357744386790677 KS(ph)PLAEEGR ddPTM_A549_MK2206_60min_R1 3 KSPLAEEGR 9 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 KS(1)PLAEEGR;KS(1)PLAEEGR;KS(1)PLAEEGR 113.69 9.5213e-05 71683600.0 13618.300000000001 14541.300000000001 13499.7 12765.199999999999 18708.2 15215.5 13909.8 13345.2 20448.7 19609.8 20535.1 True False 15916.736104531456 15281.390059085945 15414.160453467559 15892.674573051601 15956.248562602681 16825.594110768532 16437.030608632445 15236.922967960943 15817.102099863845 15179.932560402412 15435.667930072023 1.0311660095720385 0.9900051055979566 0.9986066377754498 1.0296071828604987 1.033725824816201 1.0900463904116926 1.0648732975532307 0.9871243043701478 1.0247112189456153 0.983432179881806 1.0 13.913980291952015 -4.885671052798782 18.888459016399942 1.0189685279969212 2.792355129115087 0.008131186566358806 0.032211553208753504 1746.5959830812612 291434.8048449563 0.00435178943949884 1333.514715872667 1.3011547371219715e-05 4.885671052798782 1.773386601118166 KS(ph)PLAEEGR ddPTM_A549_PD325901_60min_R1 3 KSPLAEEGR 9 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 KS(1)PLAEEGR;KS(1)PLAEEGR;KS(1)PLAEEGR 112.82 0.00011012 97298400.0 20123.4 19316.800000000003 20307.7 19270.9 23259.6 20140.9 18912.3 20328.1 21539.4 21776.8 22518.9 True False 22166.312753935887 20944.694528315507 21685.90264212048 20461.219725610652 21625.92593726387 19976.879188094124 19632.017925707656 19922.640098414042 20634.173923281178 20401.80913154806 19749.21805906848 1.1223893871462682 1.060532850752442 1.0980638614278053 1.0360521446678357 1.095026946007801 1.011527602173652 0.9940655810771704 1.0087812104168818 1.0448096659607413 1.0330438942204054 1.0 14.269507912604423 -7.266750463497598 24.83241624448342 1.0177613315930876 1.079491357658771 0.6473904921359267 0.024558925243478424 224.2272049457538 1048392.7658992712 0.0038459534449095333 0.006261640415373451 5.410651183199479e-08 7.266750463497598 0.06173002606568345 KS(ph)PLGGGGGSGASSQAACLK ddPTM_A549_PD325901_60min_R1 1 KSPLGGGGGSGASSQAACLK 20 1 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2 J3QQY0;Q68DK7 MSL1 Male-specific lethal 1 homolog 1 KS(0.989)PLGGGGGS(0.01)GAS(0.001)SQAACLK 56.72 0.0026771 3895500.0 2203.6 2169.4 2185.4 2264.1 2151.3 2144.5 2544.5 2446.2 2119.3 2441.2 2091.3 True False 2427.3078497954207 2352.222951509961 2333.7143858777763 2403.948314855822 2000.200109582099 2127.035903006709 2641.3323399038254 2397.4086219932237 2030.2331910642736 2287.062215382202 1834.083357842964 1.323444673011012 1.2825060221234288 1.2724145693260203 1.3107083189954174 1.0905720838852724 1.1597269523825142 1.4401375644181484 1.307142672518864 1.1069470656186522 1.2469783369453715 1.0 10.840843494594921 -8.94975885747771 2.8821715607906153 1.0424827730865158 1.270214846817375 0.23044232275549903 0.1066587500401715 0.14026708444716682 2.284573156940556 0.017421351295014032 0.017878027925843816 1.1226416293627899e-09 8.94975885747771 0.22773207373085924 KS(ph)PLPR ddPTM_A549_PD325901_60min_R1 2 KSPLPR 6 1 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9;Q9H6P5-2 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 KS(1)PLPR;KS(1)PLPR 52.716 0.037203 41146000.0 2589.9 2603.8 3255.1000000000004 3073.6 3315.3999999999996 3074.1000000000004 2617.8999999999996 2901.41 3023.9 3039.3 2675.94 True False 2852.8247414163907 2823.231364036894 3476.010660506428 3263.4492913479344 3082.537741509081 3049.0655488146076 2717.5256170698485 2843.5391014378865 2896.8159988955126 2847.398079309818 2346.816344181277 1.2156148257999466 1.2030048158803928 1.4811600699496097 1.390585718153603 1.3134976450764713 1.2992348363238968 1.1579626261798084 1.211658129315568 1.2343599046759286 1.2133024752318982 1.0 11.19648922933265 -10.603774535797918 0.29593162711964094 0.8799643346472625 1.3305956555179559 0.25604009026277375 0.10304491268803452 1.8272556763752423 0.21790139920214277 0.2827015609113855 0.04749026581903452 2.4901497452833242e-11 10.603774535797918 0.45063132087069335 KS(ph)PLVPR ddPTM_A549_MK2206_60min_R1 1 KSPLVPR 7 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 KS(1)PLVPR 78.556 0.006993300000000001 7494800.0 1075.5 1084.7 1174.5 1014.9 1380.1 987.66 984.82 876.94 1290.4 1400.3 1597.5 True False 1257.0181065495387 1139.906596871705 1341.0617608241412 1263.5505455605917 1177.0891182074147 1092.1735256443521 1163.7490462834403 1001.248930516116 998.1264603453678 1083.9712574494126 1200.7966612429473 1.0468201212754844 0.9492919439764141 1.116810034628182 1.0522602088622464 0.9802568213247754 0.9095407748001572 0.9691474700461284 0.8338205483347373 0.8312202161789864 0.9027100860918381 1.0 10.229776155395102 -7.036892344416272 2.8933276069904537 0.9145593621598573 1.0397309731368805 0.5259603433528959 0.05911426225854847 0.22328815054427092 3.7448391395742706 0.011262708005291675 0.021461727734157898 9.185602666252138e-08 7.036892344416272 0.12517161097702312 KS(ph)PLVPR ddPTM_A549_PD325901_60min_R1 2 KSPLVPR 7 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 KS(1)PLVPR;KS(1)PLVPR 98.04799999999999 0.004836699999999999 28903000.0 2612.5 3137.5 2549.3 2405.7 3297.7 3495.0 3016.0 2917.1000000000004 3084.5 3174.6 3144.6 True False 2877.719076779148 3401.908136057209 2722.3108281862433 2554.2946252588913 3066.0809284473958 3466.537878763558 3130.775530418525 2858.91615207932 2954.8691916376893 2974.1552142193736 2757.83413526179 1.043470685921428 1.2335434145803985 0.9871191285141684 0.9261958841540057 1.1117713314388087 1.2569783782281359 1.135229813275675 1.0366526817276975 1.0714455789260857 1.0784387560483397 1.0 11.429319975947983 -9.94136285733758 0.7150603640289552 1.004776103014813 1.093666579438345 0.024254543512855276 0.094618950303483 1.111788565096483 1.1574463360340839 0.04751322985692806 0.020899999806279223 1.144556253763175e-10 9.94136285733758 0.0888904764235321 KS(ph)PNLSK ddPTM_A549_PD325901_60min_R1 1 KSPNLSK 7 1 K7ENY6;K7EJR3;R4GMR5;P48556 K7ENY6 PSMD8 26S proteasome non-ATPase regulatory subunit 8 1 KS(1)PNLSK 59.426 0.012691 5447700.0 3394.4 3108.6 3039.2 2629.2 3287.6 2612.7 2741.7 2840.3 2953.0 3472.7 3618.5 True False 3738.9969891747915 3370.57263163265 3245.4583881942594 2791.5997126535613 3056.690317604288 2591.4230374379235 2846.036893815807 2783.6479883277552 2828.895679334121 3253.4331293453115 3173.447439561406 1.1782129877315846 1.0621170496204873 1.0226917098846944 0.8796741606154918 0.9632081122562235 0.8165955437396742 0.896828117691828 0.8771684552344361 0.8914266686972749 1.0252046682061828 1.0 11.631835232746129 -5.625451478108025 1.4574039450979703 0.9268921763549398 1.1933314723423463 0.6496098230030496 0.05923452143068685 0.32269456042205014 0.9699202044161938 0.008977406081444268 0.10208652218534171 2.3689097853052547e-06 5.625451478108025 0.26643929598740645 KS(ph)PPKADEKER ddPTM_A549_MK2206_60min_R1 2 KSPPKADEKER 11 3 E9PG73;Q13427;C9JM79;Q13427-2 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 KS(1)PPKADEKER;KS(1)PPKADEKER 51.54600000000001 0.0042629 148926000.0 3373.1000000000004 3201.3 3520.3 2637.3 3390.3 3182.5 2656.3 2680.0 4411.200000000001 4509.9 4222.2 True False 3942.3968156227315 3364.2324961421496 4019.5314743543836 3283.438618392897 2891.5913611032524 3519.270037627475 3138.9153262958716 3059.898207155783 3412.070243238905 3491.110457738418 3173.7112132081184 1.2422040162997672 1.0600310709245169 1.2665082625117852 1.034573846772234 0.9111072705888424 1.108881621926165 0.9890362151517014 0.9641388272572889 1.0751041963234718 1.1000088613007293 1.0 11.631955143072329 -6.35252222577021 8.085558629276475 1.023841088701603 1.1763148149352836 0.5016465560895244 0.07371484513821161 0.1810886588106892 14.48510715955055 0.009305652487147029 0.021688889477317248 4.4409693335642766e-07 6.35252222577021 0.1524737262336806 KS(ph)PPKADEKER ddPTM_A549_PD325901_60min_R1 2 KSPPKADEKER 11 3 E9PG73;Q13427;C9JM79;Q13427-2 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 KS(1)PPKADEKER;KS(1)PPKADEKER 64.52 0.0010765999999999998 155638000.0 3998.2 4693.4 4791.6 5119.200000000001 5278.7 5721.299999999999 5525.8 4919.3 5611.9 5425.0 6082.9 True False 4404.094320680725 5088.92928948873 5116.786790231514 5435.401357453258 4907.942322526388 5674.707629690971 5736.087342833786 4821.180702383804 5376.051358907939 5082.464574163708 5334.741862680132 0.825549658080015 0.9539223116096742 0.9591442138984548 1.018868672067772 0.9199962151609482 1.0637267511271937 1.0752324087059053 0.9037327065646773 1.007743485493983 0.9527104975254262 1.0 12.381202748318861 -4.235818036141147 0.8894532688644122 1.0015918662073586 4.095996668164865e-11 0.4542682739740651 0.05127507034251851 6.316245692682187 0.9425415340041149 0.006954279890407329 9.482767040190737 5.8100780140227277e-05 4.235818036141147 -1.0015918661663987 KS(ph)PRPAGPQLFLPDPDPQR ddPTM_A549_MK2206_60min_R1 4 KSPRPAGPQLFLPDPDPQR 19 2 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR 135.72 1.6582e-17 199259000.0 11643.099999999999 12115.4 11781.2 10493.2 14356.4 12120.5 12316.099999999999 11542.099999999999 17580.6 15670.800000000001 16197.900000000001 True False 13608.170633535035 12732.022110942624 13451.951312576739 13064.03447105765 12244.59257780808 13403.083265063244 14553.775947819378 13178.228021198789 13598.622170449293 12130.755396156728 12175.514390702436 1.1176669992626034 1.0457071218826823 1.1048363856272903 1.0729759788246576 1.005673533362861 1.100822752531771 1.1953315055775426 1.0823549296005148 1.1168827643810746 0.9963238518628924 1.0 13.57169510407382 -10.818936195611492 1.0444136465595448 0.9995572099246534 1.0935441085118718 0.39709146072141266 0.04511315392639786 0.47314194221676215 0.9090071654850215 0.03280268765221847 0.007969387248644223 1.5172732613382475e-11 10.818936195611492 0.09398689858721843 KS(ph)PRPAGPQLFLPDPDPQR ddPTM_A549_PD325901_60min_R1 7 KSPRPAGPQLFLPDPDPQR 19 2 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR;KS(1)PRPAGPQLFLPDPDPQR 97.124 3.3634e-07 296320000.0 21243.67 20644.72 22521.49 22695.489999999998 25957.84 24596.58 23040.38 26227.190000000002 27074.9 27067.190000000002 26875.46 True False 23400.3117396367 22384.523007051142 24049.93374412121 24097.338872102464 24134.650868086537 24396.273607450115 23917.194269079697 25704.068120617478 25937.036108500986 25358.16300408446 23569.94879757771 0.9928028245034439 0.9497060515189413 1.020364276166473 1.0223755290711092 1.0239585616141373 1.0350584049617166 1.0147325509479967 1.0905440797249035 1.1004281906274884 1.0758683958910649 1.0 14.524661004087426 -6.23657648061291 0.8208702312983142 1.0491593431605026 0.965585932794686 0.4603801833271629 0.03124843424888296 0.8596879376418859 0.8577768709015253 0.006749061944577219 0.04807333044359604 5.799940247718257e-07 6.23657648061291 -0.08357341036581667 KS(ph)PSAGDVHILTGFAK ddPTM_A549_MK2206_60min_R1 2 KSPSAGDVHILTGFAK 16 1 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 KS(0.57)PS(0.43)AGDVHILTGFAK;KS(0.5)PS(0.5)AGDVHILT(0.001)GFAK 83.45299999999999 6.591899999999999e-05 8649000.0 2824.02 3298.8999999999996 3496.12 3281.1200000000003 3909.9 3404.1000000000004 2743.33 3103.9 5106.3 4841.3 5152.1 True False 3300.6455353398674 3466.7999192588445 3991.9223867624505 4084.9945472950753 3334.7588894132123 3764.3196025413013 3241.7575507613074 3543.8873302950856 3949.731203085518 3747.646967571126 3872.691379273735 0.8522872628076172 0.8951913746116765 1.0307876346994311 1.0548205749514579 0.8610959570030587 0.9720164180103715 0.8370813042606173 0.9150967591328406 1.0198930966263133 0.9677112376235725 1.0 11.919120820024737 -8.76346377231615 24.996308026347396 1.009393966270876 0.9302041677377 0.1608517798174791 0.06762427324434502 59.82482291887839 738688.0961113074 0.011636696402044433 0.012695262004973833 1.7239958961545573e-09 8.76346377231615 -0.07918979853317598 KS(ph)PSDTEGLVK ddPTM_A549_MK2206_60min_R1 2 KSPSDTEGLVK 11 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 KS(0.499)PS(0.499)DT(0.001)EGLVK;KS(0.5)PS(0.5)DT(0.001)EGLVK 113.77 1.9276e-05 10244700.0 4129.2 5457.5 4526.299999999999 5105.5 5755.1 4760.1 4778.1 4902.2 7091.299999999999 6865.9 7143.6 True False 4826.108010752535 5735.263439132786 5168.197401463011 6356.347729194602 4908.532413734872 5263.810622501349 5646.218921271815 5597.101862357861 5485.131872479158 5314.888421425358 5369.646966669868 0.898775662666251 1.0680894805063255 0.9624836480950645 1.183755239152466 0.914125722641135 0.9802898878035261 1.051506543413127 1.0423593761563539 1.0215069829592376 0.9898022075595652 1.0 12.390611524422651 -10.796132897230459 1.1893193014140873 1.000513909708001 1.016991656693062 0.006409479986519084 0.0746402247393783 3.2157031467335178 8.444707371532726 0.040287556945732016 0.011451868166167029 1.5990686272542638e-11 10.796132897230459 0.016477746985060993 KS(ph)PSDTEGLVK ddPTM_A549_PD325901_60min_R1 2 KSPSDTEGLVK 11 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 KS(0.992)PS(0.005)DT(0.003)EGLVK;KS(0.879)PS(0.118)DT(0.002)EGLVK 131.13 7.0105e-08 21732000.0 6912.6 7357.2 6588.0 7952.9 7940.1 7706.6 7390.2 7520.3 7333.0 8504.7 9515.3 True False 7614.362063212837 7977.217064095644 7035.101296862264 8444.13257065362 7382.414767857958 7643.840004715084 7671.438105072607 7370.301716938776 7024.819511194412 7967.711790578819 8344.978422456445 0.9124483824574657 0.9559302205777848 0.8430340907689725 1.0118818938980538 0.8846535478140705 0.9159807992007999 0.9192879497960915 0.8832020100980967 0.841801998228124 0.954791179464 1.0 13.026692603889826 -11.06972801452822 1.4086844202360052 0.9995978464206197 0.9010262480149418 0.21693559032464726 0.04777220851315964 0.3629681852703795 1.2941191329123778 0.03325387381745494 0.007479884857754221 8.516712471089802e-12 11.06972801452822 -0.09857159840567786 KS(ph)PSEAR ddPTM_A549_MK2206_60min_R1 4 KSPSEAR 7 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KS(0.992)PS(0.008)EAR;KS(0.5)PS(0.5)EAR;KS(0.921)PS(0.079)EAR;KS(0.5)PS(0.5)EAR 95.48299999999999 0.0049729 224284000.0 19114.7 16551.6 11068.2 8770.9 9304.9 11231.699999999999 9911.099999999999 13624.9 7987.700000000001 21103.5 19947.6 True False 22340.794050453227 17394.005742400404 12637.837191276081 10919.770893740666 7936.161536126491 12420.231039000937 11711.818578643608 15556.271299506276 6178.49870373581 16336.204692982705 14994.060394247137 1.4899762614684984 1.1600597359921312 0.8428562283319145 0.7282731032569617 0.529287019490158 0.8283434048169023 0.781097199204103 1.037495574279189 0.4120630797316484 1.089511730875148 1.0 13.872103497819289 -5.545280550064168 1.790407543505304 0.7375625936276999 1.54780410197225 0.5111558309063421 0.20088451714628192 0.31335996870929717 1.4852564605840604 0.03192545816781316 0.3537687132750304 2.8491771318274503e-06 5.545280550064168 0.81024150834455 KS(ph)PSEAR ddPTM_A549_PD325901_60min_R1 4 KSPSEAR 7 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KS(0.89)PS(0.11)EAR;KS(0.906)PS(0.094)EAR;KS(0.657)PS(0.343)EAR;KS(0.919)PS(0.081)EAR 89.82700000000001 0.0052731 339117000.0 23898.4 24268.0 22146.8 20016.3 23428.6 17041.8 13592.0 17398.8 20030.399999999998 23803.199999999997 28008.000000000004 True False 26324.547974927777 26313.149528553397 23649.815027527206 21252.661390684418 21783.05596028222 16903.017230990783 14109.250997827783 17051.767284905447 19188.591945592336 22300.261889720485 24563.193557340295 1.0717070609518171 1.0712430151693428 0.9628151556237629 0.8652238700587619 0.8868169323924382 0.6881441206548488 0.5744062133000402 0.6941999314991276 0.7811928811617473 0.9078730677940055 1.0 14.58421052290478 -6.044494518097551 1.7767052429732382 0.8380360562808915 1.0815296455169614 0.4406345982522578 0.11658246365688098 0.3939961469675877 2.324102579404701 0.021754872801435975 0.09584436918609168 9.026211007762108e-07 6.044494518097551 0.2434935892360699 KS(ph)PSEARQDVDLCLVSSCEYK ddPTM_A549_MK2206_60min_R1 1 KSPSEARQDVDLCLVSSCEYK 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KS(0.866)PS(0.134)EARQDVDLCLVSSCEYK 80.752 3.0019000000000002e-05 3693100.0 963.04 1377.9 1394.4 875.26 1377.8 820.99 932.55 619.07 1444.8 1428.3 1854.8 True False 1125.5776079325583 1448.0292245132514 1592.1468874356606 1089.698739291914 1175.1274451606237 907.8666168709443 1101.9822638772791 706.8250683223619 1117.5551068715026 1105.6460380025692 1394.2019701242054 0.807327512119556 1.0386079316644852 1.1419772181887111 0.7815931713213947 0.8428674398271973 0.6511729550848828 0.7904036054253364 0.506974658958051 0.8015733235349989 0.7930314701133799 1.0 10.445223856047908 -4.921615884773824 14.3937736681849 0.867424753949123 8.196860615356904e-05 0.0 0.17128423884627617 2566327.4480460812 9564796.76301946 0.025155587845503827 67268186.97503649 1.1977994662593554e-05 4.921615884773824 -0.8673427853429694 KS(ph)PSEARQDVDLCLVSSCEYK ddPTM_A549_PD325901_60min_R1 1 KSPSEARQDVDLCLVSSCEYK 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KS(0.82)PS(0.18)EARQDVDLCLVSSCEYK 76.691 4.9713e-05 4783800.0 1213.6 1232.6 1459.3 1641.3 1439.9 1338.0 1250.2 1779.2 1471.8 1546.2 1584.6 True False 1336.8037785948998 1336.4755278100756 1558.3368734837734 1742.6793733372479 1338.7663913853314 1327.103771612486 1297.7770451356903 1743.7124602446013 1409.9453643223694 1448.5726681238568 1389.7042456070196 0.9619340106505805 0.9616978087494481 1.1213442560960842 1.2539929836481498 0.9633462627874188 0.9549541032256185 0.9338512487373342 1.2547363698115146 1.0145650549599556 1.0423603962518828 1.0 10.440562168477161 KS(ph)PSLESLSRPPSLGFGDTR ddPTM_A549_PD325901_60min_R1 1 KSPSLESLSRPPSLGFGDTR 20 2 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 KS(0.62)PS(0.334)LES(0.021)LS(0.021)RPPS(0.003)LGFGDT(0.001)R 40.681999999999995 0.018993 5431500.0 824.43 1302.1 952.58 1135.2 1424.7 1255.6 1151.9 1184.9 1421.7 1053.6 1178.9 True False 908.1255266867119 1411.832536720348 1017.2278071288792 1205.318725773742 1324.6339869481778 1245.3748098928525 1195.7361848438666 1161.2662399639323 1361.9508930949264 987.0755161914994 1033.9027736628273 0.8783471229789607 1.3655370434094316 0.9838718233873449 1.1657950403824107 1.2811978270020221 1.2045376428199714 1.1565267211806667 1.1231870825241064 1.3172910720317703 0.9547082581997223 1.0 10.013884808274753 -5.228885727837343 23.57071120815818 1.1635674164792098 0.8783459700904951 0.2724812145530706 0.12943592234605397 6929.890758712527 5017457.7238913765 0.017955649828236518 3.470641508439491 5.903563951259663e-06 5.228885727837343 -0.2852214463887147 KS(ph)PTRPK ddPTM_A549_MK2206_60min_R1 1 KSPTRPK 7 2 Q8IY57;Q8IY57-5;G3V1X5;A0A0B4J255;F8VRE5;G3V219;G3V212;Q8IY57-4;Q8N488 Q8IY57;Q8N488 YAF2;RYBP YY1-associated factor 2;RING1 and YY1-binding protein 1 KS(0.814)PT(0.186)RPK 51.727 0.010076 4719200.0 1374.0 1669.5 1306.8 1031.2 1863.0 1623.5 1298.5 1514.3 2148.2 2313.8 1661.9 True False 1605.8976089252114 1754.4704189889492 1492.1238902043322 1283.8440462923265 1588.9551679011777 1795.29769240792 1534.4206419437537 1728.9566623492544 1661.6361299704877 1791.1109729961088 1249.2043638933667 1.2855363424445196 1.4044702930118107 1.1944593961822738 1.027729395926059 1.271973756919098 1.4371529145259763 1.2283183490981893 1.3840462876391615 1.3301555598090486 1.4338014057314001 1.0 10.28679379896376 -10.730474799994864 0.9582357146930537 0.9980455457231738 1.2847153613594549 0.0 0.16627260203357985 0.4052458958224778 0.6542529469442192 0.07998305569379725 0.020104752041416152 1.8600524899275246e-11 10.730474799994864 0.286669815636281 KS(ph)PTSLK ddPTM_A549_MK2206_60min_R1 1 KSPTSLK 7 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KS(0.874)PT(0.113)S(0.014)LK 41.117 0.045945 18740000.0 5388.4 6388.2 6210.8 5076.1 7060.9 6282.8 5541.5 6073.5 7716.0 7383.4 7407.1 True False 6297.830186268278 6713.332093791678 7091.58483109968 6319.744727874788 6022.250963517674 6947.641725814891 6548.318819662157 6934.437224313668 5968.338319920067 5715.484812006 5567.7126444398355 1.13113419970723 1.2057612385035548 1.2736980666884183 1.1350702041323855 1.0816382504100244 1.2478448816414967 1.1761237042650896 1.2454732611315176 1.0719551638284195 1.026540911322666 1.0 12.442869038747517 -8.94441094024428 3.778239242807164 1.0297378428481798 1.1868635337634275 0.6107286674059036 0.055357290856487495 0.1092469220805474 3.007053940117903 0.010444756558890102 0.010818943482821178 1.136551343702626e-09 8.94441094024428 0.15712569091524764 KS(ph)PTSLK ddPTM_A549_PD325901_60min_R1 1 KSPTSLK 7 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KS(0.977)PT(0.017)S(0.006)LK 46.406000000000006 0.026068 22182000.0 3780.6 4036.8 4183.8 3945.8 5239.6 4255.4 4388.6 5074.3 5000.1 4336.2 4264.5 True False 4164.403728869378 4376.995303150832 4467.737827233204 4189.523104438012 4871.588571638711 4220.745433273372 4555.610574534067 4973.089105788661 4789.963185316131 4062.411591979478 3739.993534892803 1.113478857654961 1.1703216228357163 1.1945843717511293 1.1201952798450743 1.3025660408737425 1.1285435105422847 1.2180797993450654 1.329705268041647 1.280741033541231 1.0862081856769616 1.0 11.868820060874958 -10.874578181430206 1.1493423876403193 1.0011836780088006 1.2121505804821195 0.4063581367770278 0.0738547288971138 0.30071436099874993 0.7116608818229121 0.049647157433672505 0.012271928949747428 1.334817274933116e-11 10.874578181430206 0.21096690247331895 KS(ph)PTSLKR ddPTM_A549_PD325901_60min_R1 1 KSPTSLKR 8 2 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KS(0.973)PT(0.022)S(0.005)LKR 41.283 0.029717 45414000.0 5728.3 5316.3 5046.6 5409.7 5830.6 5755.9 5060.4 5452.9 6363.8 5874.5 6604.5 True False 6309.83279904842 5764.32325855647 5389.092623671081 5743.844882679894 5421.078770478026 5709.025858762564 5252.976291157131 5344.137631782704 6096.351616710626 5503.583067451559 5792.188369374963 1.0893694052511134 0.9951891911931207 0.9304070033641912 0.9916536749822096 0.9359292938642837 0.9856422986772833 0.9069070196216669 0.9226456895011845 1.052512664978899 0.9501733570252399 1.0 12.499892806134325 -8.77198881350888 24.994016227626975 1.0247976464489752 0.9672986380965519 0.011282826926423795 0.05355262003651351 236.93077626311967 561341.3138627856 0.008677644066519573 0.00928578965915722 1.6904844743241e-09 8.77198881350888 -0.057499008352423275 KS(ph)QENLGNPSK ddPTM_A549_MK2206_60min_R1 1 KSQENLGNPSK 11 1 C9J1M4;C9J8V3;C9JJN3;C9JR71;C9JTF7;C9JP72;C9J3Y6;C9IYB9;C9K0C5;B4DGG1;Q9H0X4-2;Q9H0X4 C9J1M4 ITFG3 Protein ITFG3 1 KS(1)QENLGNPSK 55.656000000000006 0.0069548000000000006 3642500.0 1229.7 1551.8 1454.3 1480.4 2011.6 2068.0 1659.6 2074.0 2120.9 2205.6 2276.2 True False 1437.243296721495 1630.779991726295 1660.5416081452092 1843.0980664576816 1715.696304750407 2286.8343873726985 1961.1278377896429 2367.995851358616 1640.5195363813466 1707.3534281442726 1710.9567200758665 0.8400231752546992 0.9531392422679071 0.9705339642206602 1.07723243073966 1.0027701370928486 1.3365822528060771 1.1462170929155258 1.3840185573213186 0.9588316975712883 0.9978939900177988 1.0 10.740587550905754 -5.5476112790441325 1.360724300731003 1.052603748720381 0.8170092965833029 0.210108296347298 0.1412874432366217 1.2412372528249007 2.8736561467635737 0.02306686824484504 0.3457922909365278 2.8339274047412538e-06 5.5476112790441325 -0.23559445213707808 KS(ph)QENLGNPSK ddPTM_A549_PD325901_60min_R1 2 KSQENLGNPSK 11 1 C9J1M4;C9J8V3;C9JJN3;C9JR71;C9JTF7;C9JP72;C9J3Y6;C9IYB9;C9K0C5;B4DGG1;Q9H0X4-2;Q9H0X4 C9J1M4 ITFG3 Protein ITFG3 1 KS(1)QENLGNPSK;KS(1)QENLGNPSK 81.632 7.9324e-05 8105600.0 2892.6 2639.0 2857.4 3365.5 3608.7 3288.6 3107.0 3140.9 3137.7 3557.9 3996.0 True False 3186.254622580429 2861.3977915713067 3051.3203469420505 3573.3792913949324 3355.237361339153 3261.818731931856 3225.2385852156362 3078.2522855116176 3005.833380645672 3333.253586804987 3504.517332731067 0.9091850089659519 0.8164884119267352 0.8706820532584324 1.0196494844013801 0.9574035574035582 0.9307469252520213 0.9203089267366273 0.8783669741797905 0.8577025294102993 0.9511305752930563 1.0 11.775000044268692 -10.987301322093764 1.2764679922080768 0.999717623742153 0.9029689210303284 0.18155561402491305 0.05295243134751243 0.47347727780651466 1.3792494051322768 0.039341537247948255 0.00913476366767406 1.0296714661388024e-11 10.987301322093764 -0.09674870271182456 KS(ph)QENLGNPSKNEDNVK ddPTM_A549_MK2206_60min_R1 3 KSQENLGNPSKNEDNVK 17 2 C9J1M4;C9J8V3;C9JJN3;C9JR71;C9JTF7;C9JP72;C9J3Y6;C9IYB9;C9K0C5;B4DGG1;Q9H0X4-2;Q9H0X4 C9J1M4 ITFG3 Protein ITFG3 1 KS(0.999)QENLGNPS(0.001)KNEDNVK;KS(1)QENLGNPSKNEDNVK;KS(1)QENLGNPSKNEDNVK 128.88 1.1095e-12 33303500.0 4699.56 4055.89 4086.3900000000003 3400.89 6292.6 4879.82 5317.13 5208.4800000000005 7413.2 6558.5 6484.200000000001 True False 5492.730834789349 4262.317476893135 4665.901548585922 4234.108202671752 5366.966875756815 5396.19931343764 6283.183694954473 5946.797990301021 5734.122036447827 5076.930294923925 4873.994185184051 1.1269465301140758 0.8745019618303426 0.9573055221873902 0.868714249914901 1.1011434712153125 1.1071411061262622 1.2891241672085023 1.2201077318430282 1.1764728923720076 1.0416365104326055 1.0 12.250888814547482 -6.8429214528081905 7.876099991320922 1.1147060618069362 0.9513218949226954 0.4171128611235908 0.09890676713122698 0.22396873503047815 18.848623844120688 0.016292930559439676 0.030920614453301562 1.4357490817387476e-07 6.8429214528081905 -0.16338416688424084 KS(ph)QENLGNPSKNEDNVK ddPTM_A549_PD325901_60min_R1 2 KSQENLGNPSKNEDNVK 17 2 C9J1M4;C9J8V3;C9JJN3;C9JR71;C9JTF7;C9JP72;C9J3Y6;C9IYB9;C9K0C5;B4DGG1;Q9H0X4-2;Q9H0X4 C9J1M4 ITFG3 Protein ITFG3 1 KS(1)QENLGNPSKNEDNVK;KS(1)QENLGNPSKNEDNVK 160.69 5.0981000000000006e-23 38704000.0 6055.200000000001 5161.7 5940.6 4950.1 6963.4 6022.6 5884.4 5841.4 6332.1 6372.9 7047.4 True False 6669.91944639736 5596.694573987725 6343.764839729804 5255.856434507227 6474.314806425872 5973.553942386669 6108.334062067236 5724.88869451035 6065.983857470903 5970.514006394082 6180.614477149387 1.0791676897268068 0.9055239725240107 1.0263971103817602 0.8503776532153684 1.0475196002537186 0.9664983901635913 0.9883053027576171 0.9262652954129529 0.9814532001466375 0.9660065400403023 1.0 12.59353456277015 -9.653794887742524 1.4147909767149958 0.9957650405817052 0.971677380814136 0.0 0.06234875707195711 1.1428410054436162 4.634885667201376 0.01390868196871431 0.010255548879960108 2.21924429572725e-10 9.653794887742524 -0.024087659767569214 KS(ph)QS(ph)IGRLS(ph)PLLLK ddPTM_A549_MK2206_60min_R1 1 KSQSIGRLSPLLLK 14 2 H3BN01 H3BN01 MPI 3 KS(1)QS(1)IGRLS(1)PLLLK 50.787 0.0073918000000000005 1896800.0 1016.5 1590.4 1201.3 1094.3 1370.4 1405.5 1179.8 1368.1 1945.9 1478.3 1579.2 True False 1188.0603489610457 1671.3445668523643 1371.6624038127204 1362.4035491249945 1168.8159753579025 1554.2290771046073 1394.15438842144 1562.032364630531 1505.156756963772 1144.3510032760607 1187.0410562972536 1.0008586835799695 1.4079922155900846 1.155530717775978 1.147730772998493 0.9846466296656994 1.3093305146097693 1.1744786593736165 1.3159042447133131 1.2679904784918048 0.9640365825640805 1.0 10.213154119129781 -10.865286093088507 1.1375779411006774 1.0010781801343163 1.2042402243380672 0.30146120326410675 0.12348832766247463 0.5029098477004639 1.165274895958833 0.07932344461819697 0.019666049632169932 1.3636845084447286e-11 10.865286093088507 0.20316204420375095 KS(ph)QS(ph)IGRLS(ph)PLLLK ddPTM_A549_PD325901_60min_R1 1 KSQSIGRLSPLLLK 14 2 H3BN01 H3BN01 MPI 3 KS(1)QS(1)IGRLS(1)PLLLK 50.787 0.0073918000000000005 5128100.0 1871.7 2578.2 2157.6 2297.6 2857.2 2523.3 2545.8 2680.7 2749.7 2372.9 2459.8 True False 2061.7136061272863 2795.4739621936865 2304.0277107027946 2439.5175337718033 2656.520128804896 2502.7510813974477 2642.6818121152132 2627.231335531533 2634.139671339326 2223.0746890383525 2157.2601939569277 0.9557092889873492 1.29584459492859 1.068034220979464 1.130840656405544 1.2314324142477255 1.160152627118571 1.2250176494787617 1.2178555664685802 1.2210579320557935 1.0305083713433314 1.0 11.074984479654892 -10.829437989088744 1.0728238420353071 0.999887914495936 1.174746440874685 0.2992613315548792 0.08877966034109616 0.43129783476823014 0.880289253815561 0.05642944579913845 0.01387843695397654 1.4810237087333725e-11 10.829437989088744 0.1748585263787491 KS(ph)QSPSPK ddPTM_A549_MK2206_60min_R1 1 KSQSPSPK 8 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 KS(0.369)QS(0.262)PS(0.369)PK 58.978 0.005639 4652200.0 1718.4 2495.3 1951.6 1467.3 2437.0 1931.5 1953.1 1591.5 2613.4 2736.6 3369.5 True False 2008.423909153628 2622.3001117119634 2228.3662259892667 1826.7885658696007 2078.52052827438 2135.890047974066 2307.952988664107 1817.099998764339 2021.469072742239 2118.400159348756 2532.7601565308983 0.7929783260269502 1.0353527178442776 0.8798173092873676 0.7212639385372118 0.8206543059021085 0.8433052938180999 0.911240246224219 0.7174386386641547 0.7981288980441912 0.836399828024108 1.0 11.306494750040006 -10.792223466850048 1.0641696473611282 0.9990893085823072 0.8362464153851626 0.0026316637711537583 0.09648337884795335 0.48348089946823813 0.9808222443756811 0.05775541922182588 0.014831097502979956 1.6135280999848124e-11 10.792223466850048 -0.1628428931971445 KS(ph)REDLSAQPVQTK ddPTM_A549_MK2206_60min_R1 3 KSREDLSAQPVQTK 14 2 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KS(1)REDLSAQPVQTK;KS(0.959)REDLS(0.041)AQPVQTK;KS(0.908)REDLS(0.092)AQPVQTK 195.96 1.0827e-31 103913000.0 10703.0 11384.2 11538.1 10549.73 16337.3 11254.36 11175.28 11667.0 16485.1 16482.1 16328.5 True False 12509.40473677332 11963.607154150333 13174.376077109431 13134.414323595378 13934.104811890436 12445.288905160456 13205.683720832636 13320.83297868899 12751.251171295275 12758.782162684409 12273.682806325794 1.0192054768048948 0.9747365434590138 1.073384108502415 1.0701282191214823 1.13528311198566 1.0139816305784126 1.0759349030941627 1.0853167047647263 1.0389099484242288 1.0395235369866815 1.0 13.583280584476611 -9.815913813148303 0.9687891513738852 1.005638483735851 1.0555656553093813 0.07353263747163774 0.04179226545646665 0.5833366821942313 1.1264823713576397 0.014056925271790845 0.008277177655154682 1.5278692377151698e-10 9.815913813148303 0.04992717157353033 KS(ph)REDLSAQPVQTK ddPTM_A549_PD325901_60min_R1 3 KSREDLSAQPVQTK 14 2 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KS(0.999)REDLS(0.001)AQPVQTK;KS(0.991)REDLS(0.009)AQPVQTK;KS(0.999)REDLS(0.001)AQPVQTK 206.21 1.4288e-32 243178000.0 34129.4 32886.8 33924.1 34123.6 41456.8 32265.9 34441.0 34411.8 37888.6 36962.1 38561.3 True False 37594.191563263645 35658.28605223464 36226.39342818537 36231.337271681514 38545.01738619587 32003.137208125045 35751.67110183834 33725.42965346513 36296.27390315566 34628.30669800854 33818.50456022087 1.1116455932082798 1.0544016217138654 1.0712003354162736 1.0713465229417254 1.1397611422337868 0.9463202948887587 1.0571629812363545 0.9972478112806555 1.0732666738271235 1.0239455336159424 1.0 15.045525245351348 -7.24256851431383 24.997215132227314 1.0286542494325803 1.0856674448480506 0.4547169298498841 0.0386175124430792 790.9563417746195 1047736.8673560783 0.006003161743019952 0.010386916761020618 5.7204670142416476e-08 7.24256851431383 0.05701319541547023 KS(ph)RS(ph)HSAKTPGFS(ph)VQS(ph)IS(ph)DFEK ddPTM_A549_MK2206_60min_R1 1 KSRSHSAKTPGFSVQSISDFEK 22 3 Q9NY61 Q9NY61 AATF Protein AATF 5 KS(0.756)RS(0.782)HS(0.385)AKT(0.385)PGFS(0.77)VQS(0.923)IS(0.998)DFEK 42.347 0.010006999999999999 20305000.0 4863.5 4490.1 4675.7 4013.8 5765.9 3884.9 4524.0 4842.3 7087.3 6923.8 7158.0 True False 5684.339898841169 4718.626911232272 5338.784567973978 4997.181180186332 4917.7437480415465 4295.997539412087 5345.952240395483 5528.710853921807 5482.03786609247 5359.708771212062 5380.471049250086 1.0564762539951655 0.8769914135844926 0.9922522617639735 0.9287627671340829 0.9139987378478631 0.7984426456510438 0.9935844262447219 1.027551454754576 1.0188769377091138 0.9961411783749087 1.0 12.393516767977129 -7.975794768502837 24.997477051108177 1.0105613378357177 0.925200180495054 0.2981453886347374 0.06100402922206055 200.9341293926499 207510.2520160366 0.008917142977202367 0.012320507400421336 1.0573170400720499e-08 7.975794768502837 -0.08536115734066363 KS(ph)RSPASAEAPGDSGER ddPTM_A549_MK2206_60min_R1 1 KSRSPASAEAPGDSGER 17 2 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 KS(0.492)RS(0.492)PAS(0.015)AEAPGDSGER 60.133 0.00076147 3266700.0 566.25 684.49 441.55 486.86 812.26 468.95 754.01 656.02 849.42 976.74 825.3 True False 661.8191565166678 719.3276173068259 504.16842953758976 606.1407218559758 692.7776299943156 518.5739777361833 891.0038569364718 749.012843976991 657.0277262450107 756.0937556246088 620.3552328787507 1.0668390003667807 1.1595414678277074 0.8127092395078259 0.9770864977525656 1.1167434290503033 0.8359306897916332 1.4362800694076192 1.2073934485910698 1.059115312360761 1.2188077339429622 1.0 9.27695076971075 -6.744362161740409 24.732816493175115 1.0640908274810805 1.001484238640442 0.03536021803554945 0.16718093761115008 757.6535291719932 1097297.3821392306 0.023145921196154995 0.04808466714504544 1.801514816273833e-07 6.744362161740409 -0.06260658884063863 KS(ph)SAELKK ddPTM_A549_MK2206_60min_R1 1 KSSAELKK 8 2 H7BZL1;A0A087WWX7;Q13163-4;Q13163-2;Q13163-3;Q13163 H7BZL1 MAP2K5 Dual specificity mitogen-activated protein kinase kinase 5 1 KS(0.5)S(0.5)AELKK 45.358999999999995 0.016551 13443000.0 3395.9 2928.5 2194.2 1824.3 3103.6 2473.8 2769.4 2988.1 2581.0 4428.9 4994.9 True False 3969.0448982162497 3077.5481413651614 2505.370553938126 2271.253581895938 2647.064551314059 2735.575874024459 3272.5641323057607 3411.6723256724586 1996.4076210100689 3428.4084139953607 3754.528477773017 1.0571353824356853 0.8196896519987501 0.6672929953175307 0.6049371033784574 0.7050324872976205 0.7286070381991229 0.8716311919537946 0.9086819678875037 0.5317332476844682 0.9131395418337342 1.0 11.874416019167803 -4.271652672165866 21.073800883888556 0.778913154181226 0.779970613647096 0.0 0.1604586374576457 0.0 0.0 0.025030065166700866 0.0 5.3499204925555966e-05 4.271652672165866 0.001057459465869992 KS(ph)SDSKPGVSSK ddPTM_A549_MK2206_60min_R1 1 KSSDSKPGVSSK 12 2 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 KS(0.5)S(0.5)DS(0.001)KPGVSSK 61.038000000000004 0.0017204 14044000.0 2369.0 1979.6 1415.7 1026.8 2214.6 1185.9 1279.2 1585.7 2038.6 2014.3 2485.3 True False 2768.82928351079 2080.353184444758 1616.4675477213584 1278.3660460948036 1888.83527366288 1311.3911508632898 1511.6140817669989 1810.4778310025838 1576.8603549752518 1559.268231007893 1868.1314192094496 1.4821383843982963 1.1136010898661057 0.8652857775955668 0.6843019891158293 1.011082654164765 0.7019801376812347 0.8091583205675537 0.9691383659553976 0.8440842752072244 0.8346673124676313 1.0 10.867380233913455 -5.384946201439695 2.463213253213202 0.8918732486480575 1.5364345577762397 0.746436567607453 0.10719944334004465 0.1640202012476615 1.4513263783097743 0.01564857161054812 0.19590334587049177 4.1214857115392235e-06 5.384946201439695 0.6445613091281822 KS(ph)SDSKPGVSSK ddPTM_A549_PD325901_60min_R1 1 KSSDSKPGVSSK 12 2 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 KS(0.499)S(0.499)DS(0.002)KPGVSSK 45.864 0.0090941 11986000.0 2041.7 2424.8 1757.5 2106.5 2621.5 2273.9 1896.2 2306.1 2958.1 4106.7 4266.9 True False 2248.9718809798987 2629.14640583634 1876.774518706046 2236.6137207913903 2437.3748836840387 2255.3821123091407 1968.360928640454 2260.1030263995485 2833.7813440698483 3847.4022611461914 3742.0983501076585 0.6009921895599556 0.7025861321257633 0.5015299821427868 0.5976897215240331 0.6513390765408174 0.6027051940642486 0.5260045954120434 0.6039667627481053 0.7572706751516356 1.0281403376358356 1.0 11.86963176075762 -9.587142101260207 0.6866997025293626 0.9774378706701323 0.5924804837345908 0.8634951359116532 0.062070798849661005 0.16060448655836954 0.16384547821373166 0.026320516360927214 0.015020503662884562 2.587366189789082e-10 9.587142101260207 -0.3849573869355415 KS(ph)SEASPTAQR ddPTM_A549_MK2206_60min_R1 1 KSSEASPTAQR 11 1 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 KS(0.308)S(0.308)EAS(0.237)PT(0.147)AQR 77.91199999999999 0.00045981 103150000.0 1023.3 1200.5 966.06 782.17 1301.1 1010.9 1074.0 1058.0 1432.1 1420.1 1596.7 True False 1196.0080227170074 1261.6003222499148 1103.0618345353503 973.8016851129458 1109.709913556748 1117.872767018889 1269.1318979188222 1207.974739989111 1107.7316365937693 1099.2984236977159 1200.1953233218246 0.9965111507073466 1.0511625047480917 0.9190685991696464 0.8113693381321627 0.9246077634141776 0.9314090342602831 1.057437796379842 1.0064817921850877 0.9229594675705449 0.9159329338620877 1.0 10.229053498043125 KS(ph)SGTGTEPVAK ddPTM_A549_MK2206_60min_R1 2 KSSGTGTEPVAK 12 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 KS(0.447)S(0.447)GT(0.048)GT(0.057)EPVAK;KS(0.544)S(0.428)GT(0.023)GT(0.005)EPVAK 45.33 0.021056000000000002 36057000.0 3824.5 3864.1 3650.6000000000004 3070.9 4020.1000000000004 3042.7 2742.6000000000004 3112.8 3819.9 4047.0 5233.5 True False 4469.982099952312 4060.766185094454 4168.309973660801 3823.270637857939 3428.74861539427 3364.6764944192046 3240.8949192105815 3554.048932550194 2954.6987491268346 3132.779889236433 3933.87751274802 1.136278922123784 1.0322553693995917 1.0595932283486422 0.971883498016486 0.8715951638766478 0.8553078949498866 0.82384235622696 0.9034467700209365 0.7510906833148505 0.7963592865015316 1.0 11.941736322476276 -6.446327831172144 1.8822186064345574 0.8737929616574492 1.080817333306006 0.6843964672268301 0.06499075970811741 0.23096314033188703 1.591332829218298 0.013293572284799604 0.038613698947686 3.5782622672156867e-07 6.446327831172144 0.2070243716485568 KS(ph)SGTGTEPVAK ddPTM_A549_PD325901_60min_R1 1 KSSGTGTEPVAK 12 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 KS(0.541)S(0.406)GT(0.042)GT(0.011)EPVAK 81.632 0.00030024 15144000.0 3258.5 3391.6 2908.4 3317.2 3010.0 3004.1 2932.1 3570.0 3135.3 3239.9 4592.7 True False 3589.300521219085 3677.422034821236 3105.781513629966 3522.0959100921946 2798.5879839362797 2979.635605606179 3043.6826700066854 3498.7935493891796 3003.534244299447 3035.3321610752087 4027.827015524018 0.8911257875239509 0.9130039648296082 0.7710811565788919 0.8744407087288906 0.6948133505113265 0.7397625553734288 0.7556637011161971 0.8686553657602867 0.7456959379643787 0.753590496656499 1.0 11.975786009415765 -10.865443795243051 1.0224027540085932 1.004276663512256 0.801136950097859 0.0 0.09925743102788012 0.3634330405745084 0.6505773872735036 0.055134348790088064 0.01226099658748769 1.363189413634783e-11 10.865443795243051 -0.20313971341439696 KS(ph)SISSISGR ddPTM_A549_MK2206_60min_R1 1 KSSISSISGR 10 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KS(0.5)S(0.5)ISSISGR 45.915 0.032884 3463300.0 1347.8 1370.2 1201.2 1162.4 1729.6 1712.0 1163.0 1352.0 2434.2 2000.1 1971.2 True False 1575.2756894537126 1439.9373274026102 1371.5482223090319 1447.1880521821197 1475.1781311872658 1893.1627036663733 1374.3020458841622 1543.6501403263485 1882.8575866186395 1548.2760208702216 1481.6966376476346 1.0631566876973182 0.9718165586774077 0.9256606159858227 0.9767100872144103 0.9956006470590919 1.2776992641840565 0.9275191769794566 1.0418125418554451 1.2707443202462108 1.0449345578108955 1.0 10.533034385368284 -7.036491059163284 24.519162783537194 1.1171424582388267 0.9801136691366161 0.18986567855080616 0.10439507380997207 535.5610938848504 359854.86339671223 0.018121997146439212 0.031395662954943275 9.194094025248494e-08 7.036491059163284 -0.1370287891022106 KS(ph)SLGNDETDKEK ddPTM_A549_PD325901_60min_R1 2 KSSLGNDETDKEK 13 2 H7C1N2;J3KR05;O75128-3;O75128;O75128-7;O75128-2;A0A0J9YWK3;A0A3B3IU00;O75128-5;O75128-4 H7C1N2 COBL Protein cordon-bleu 1 KS(0.554)S(0.446)LGNDETDKEK;KS(0.5)S(0.5)LGNDETDKEK 62.165 0.0014765999999999998 19097600.0 6816.1 6696.3 6132.9 5585.200000000001 8239.9 7675.9 6487.5 7386.0 8595.9 7998.8 8840.2 True False 7508.0654542523835 7260.620701666892 6549.115474123645 5930.185119090475 7661.157850111806 7613.390015336537 6734.385362596215 7238.680435795091 8234.64421604746 7493.754402916249 7752.911442644941 0.9684188333371408 0.9365024681863124 0.8447298182848048 0.7648978274756826 0.9881652727221357 0.9820039957452672 0.8686266330289396 0.933672529261547 1.0621357250068335 0.9665729395149288 1.0 12.920522470545137 -8.645747816709155 5.284006903494567 1.0291402847313487 0.9065105656345591 0.29809147624951826 0.06632783051420006 0.1536881272005823 6.579637553582819 0.011474609496563815 0.012997863406842806 2.2607481456604537e-09 8.645747816709155 -0.12262971909678955 KS(ph)SLLSEEQQETSTLVETIR ddPTM_A549_MK2206_60min_R1 2 KSSLLSEEQQETSTLVETIR 20 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 KS(0.5)S(0.5)LLSEEQQETSTLVETIR;KS(0.495)S(0.495)LLS(0.01)EEQQETSTLVETIR 140.55 4.2537e-20 6495900.0 1871.51 1727.8400000000001 1395.65 1040.3899999999999 1993.3 1194.6399999999999 1708.75 1610.15 2093.4 1987.28 2071.8 True False 2187.375133973525 1815.7796757986616 1593.5741562317687 1295.285596704881 1700.0882105085434 1321.0560118621481 2019.2077565817394 1838.393693377568 1619.2482424728707 1538.3520677740983 1557.3148812288814 1.404581154613678 1.1659682301153027 1.023283200745038 0.8317429007566971 1.0916791658518021 0.8482908805313022 1.2965956858951846 1.1804893894848592 1.0397693247463977 0.9878233916060575 1.0 10.604844964247926 -5.37798540442765 2.46754971176555 1.0300076008552166 1.4405553780811664 0.4314796321487162 0.12553958181122268 0.28141004902181427 2.479639735470852 0.01684997844687462 0.21574189157555046 4.188076399789832e-06 5.37798540442765 0.4105477772259498 KS(ph)SLLSEEQQETSTLVETIR ddPTM_A549_PD325901_60min_R1 2 KSSLLSEEQQETSTLVETIR 20 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 KS(0.497)S(0.497)LLS(0.006)EEQQETSTLVETIR;KS(0.487)S(0.487)LLS(0.027)EEQQETSTLVETIR 155.56 4.5598e-27 9294300.0 2446.6 3159.1 3035.8999999999996 2694.4 3824.3 2907.1 2786.5 3330.7 2906.6 3309.1000000000004 3335.8 True False 2694.977030908275 3425.328443862414 3241.9344303497487 2860.8269685736173 3555.694361118774 2883.425541445933 2892.541782331308 3264.266575616395 2784.445709973775 3100.1628612654604 2925.5177473784543 0.9211966098388 1.1708452108799676 1.1081574990460523 0.977887408523566 1.2154068674869667 0.9856120490226935 0.9887281609975889 1.1157910693043966 0.9517787791473515 1.0596971643885957 1.0 11.514476254819687 -8.772769616794768 24.9916084845474 0.9772288648032025 1.0632503962852689 0.05268401725104399 0.08868743208283028 259.98612040926696 573460.9207672745 0.013817764019433888 0.014773187329696942 1.687447940211599e-09 8.772769616794768 0.08602153148206637 KS(ph)SLVTSK ddPTM_A549_MK2206_60min_R1 1 KSSLVTSK 8 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 KS(0.638)S(0.344)LVT(0.015)S(0.002)K 65.574 0.0037167000000000003 50883000.0 3154.6 4010.7 3892.1 3134.9 5004.1 3151.8 3119.3 3583.7 4893.9 4680.3 4173.2 True False 3687.0193574348414 4214.827498915229 4444.058305069084 3902.950640731011 4268.003518891184 3485.321384004485 3686.036433126798 4091.7004496209593 3785.439463952412 3623.016979390481 3136.8792655393204 1.1753781530386493 1.3436371444760014 1.4167132136355975 1.244214491646997 1.3605890305623194 1.111079225232871 1.175064808397419 1.304385697776442 1.2067533186686372 1.1549749520779147 1.0 11.615114287429932 -11.668233050319834 0.20728519385829725 0.7143433175357973 1.3312759896550026 0.32353202077432697 0.09593275199166458 5.868556704934886 0.24063913795394148 0.947504670237944 0.08864748182433214 2.1466782184123333e-12 11.668233050319834 0.6169326721192053 KS(ph)SLVTSK ddPTM_A549_PD325901_60min_R1 1 KSSLVTSK 8 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 KS(0.413)S(0.312)LVT(0.237)S(0.038)K 54.143 0.009857 99145000.0 4773.9 4287.8 4648.8 3931.7 5100.1 5333.0 5598.8 4902.7 5270.1 4609.3 4248.9 True False 5258.542813640564 4649.147954035411 4964.295523505356 4174.552179461438 4741.88657038984 5289.569816150518 5811.865397780918 4804.911802406253 5048.616024266422 4318.268011371941 3726.3122359962576 1.4111922138040194 1.2476538893130158 1.3322274702452876 1.120290495019492 1.27254139483619 1.41951867722011 1.559682879399684 1.2894549619301088 1.3548558747967174 1.158858339797019 1.0 11.863532850635218 -10.637670309378578 0.8393878987480825 0.9930558913567415 1.3319536050709573 0.39888089769780954 0.11507614092276873 0.39431376391021644 0.47953017056840946 0.08445704858189078 0.020983381341885682 2.3031895989063366e-11 10.637670309378578 0.33889771371421573 KS(ph)SPEMEDAR ddPTM_A549_MK2206_60min_R1 1 KSSPEMEDAR 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 KS(0.619)S(0.381)PEMEDAR 71.555 0.0020642 3335400.0 1329.3 1393.0 1768.1 1602.3 1859.0 1502.5 1370.5 1411.5 2428.3 2107.5 2500.0 True False 1553.6533417352873 1463.8977500159363 2018.8431667204463 1994.8635719299807 1585.543562602409 1661.493552721219 1619.5021099606568 1611.5844475374565 1878.293927198276 1631.4142862776819 1879.1810035100884 0.826771523782566 0.7790083803963258 1.0743207615176427 1.0615600988961738 0.843741800093126 0.8841583379236726 0.8618127295537885 0.8575993714959905 0.9995279452537272 0.8681517550626536 1.0 10.875888319110194 -8.779562926159391 23.976103499083244 0.9997771138285305 0.9023840448138455 0.012427908371696272 0.09562531007295791 181.40910137800068 239989.5510298568 0.015825284690824927 0.01686602293941184 1.6612579559501253e-09 8.779562926159391 -0.09739306901468503 KS(ph)SPFKDLMTVPESR ddPTM_A549_MK2206_60min_R1 2 KSSPFKDLMTVPESR 15 2 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 KS(0.497)S(0.497)PFKDLMT(0.005)VPESR;KS(0.5)S(0.5)PFKDLMTVPESR 58.49 0.0017277999999999998 11640700.0 1885.69 2009.5 2286.28 1999.87 2990.5 2503.0 2156.31 2351.3 3316.5 2622.0 2774.7 True False 2203.9483713058107 2111.7749667315315 2610.5088825347093 2489.8382397775745 2550.601411491395 2767.865798643069 2548.083615271263 2684.6039755542483 2565.3180453622226 2029.6883789419144 2085.665412175778 1.0567123367149476 1.012518572923217 1.2516431769424665 1.1937860335806025 1.2229197437908286 1.3270900416167979 1.2217125529320103 1.2871690540016456 1.2299758294817136 0.9731610674909414 1.0 11.02629202022287 -10.678731529660318 0.9691681168908833 1.001392327417276 1.2036665880307291 0.4577042019178784 0.08859107383215162 0.4511141437680665 0.7617381624308428 0.06174503602309085 0.016774890683425112 2.09540738570381e-11 10.678731529660318 0.2022742606134531 KS(ph)SPFKDLMTVPESR ddPTM_A549_PD325901_60min_R1 3 KSSPFKDLMTVPESR 15 2 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 KS(0.5)S(0.5)PFKDLMTVPESR;KS(0.499)S(0.499)PFKDLMT(0.001)VPESR;KS(0.554)S(0.446)PFKDLMTVPESR 80.316 8.236200000000001e-05 29549500.0 7982.299999999999 8021.1 7394.200000000001 8002.889999999999 9036.4 10060.3 8528.6 8765.1 10602.5 9311.2 10216.6 True False 8792.657219741319 8697.066247052897 7896.014876936696 8497.210339418094 8401.714437887633 9978.372252281835 8853.160540028988 8590.273204412075 10156.913796186927 8723.289242940673 8960.022968363426 0.9813208348669359 0.9706522268705122 0.881249401348234 0.9483469372143958 0.9376889398110806 1.1136547626623343 0.9880734202678102 0.9587333910574911 1.13358122317873 0.9735788930163878 1.0 13.129286715192906 -7.24100145737846 23.93253910093391 1.0527636149542268 0.9421124023692713 0.2883016204325185 0.059110458545585075 371.8285310367798 435405.904846968 0.009570804907866057 0.016561505185742297 5.7411453562617884e-08 7.24100145737846 -0.11065121258495547 KS(ph)SPQKEVK ddPTM_A549_MK2206_60min_R1 1 KSSPQKEVK 9 2 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 KS(0.5)S(0.5)PQKEVK 44.188 0.019684 11823000.0 907.64 791.36 858.91 580.37 809.42 777.49 644.42 560.9 965.58 1669.0 1434.3 True False 1060.8274423325176 831.6368438281489 980.7163533328765 722.5606760537995 690.3553902321908 859.763475743907 761.5027724924095 640.4092926842078 746.8776717144143 1291.9717408291585 1078.1237253338081 0.98395705187182 0.7713742164153358 0.9096510263970191 0.6702019991537433 0.6403303943788485 0.7974627174424785 0.7063222472510132 0.5940035244896633 0.6927569203461935 1.1983520169998474 1.0 10.074307035742233 -10.760305115932374 1.0479676993779985 0.9977560023877237 0.7450494409386277 0.49013706571673155 0.1269991772385911 0.4034770876474166 0.7978252501597565 0.0733483329593168 0.019361256844790998 1.736580356172324e-11 10.760305115932374 -0.252706561449096 KS(ph)SPQSTDTAMDLLK ddPTM_A549_MK2206_60min_R1 1 KSSPQSTDTAMDLLK 15 1 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 KS(0.446)S(0.446)PQS(0.053)T(0.053)DT(0.002)AMDLLK 59.434 0.0027861 1929300.0 843.81 752.36 764.29 676.93 1089.6 867.74 854.25 532.74 1167.9 1025.3 1241.4 True False 986.224498826189 790.6519104106172 872.6778145425988 842.7778803885425 929.3212833843918 959.5636708408057 1009.4561674088952 608.2575264478247 903.3725147530646 793.6840178982243 933.1261191029697 1.0569037546331503 0.8473151637537321 0.9352195771580363 0.9031768194407841 0.9959224850310314 1.0283322384794575 1.0818003555396165 0.651849213086601 0.9681140590314761 0.8505645717657185 1.0 9.865928275254548 -8.080747713785257 0.0073939822608360675 1.9102486496172706 3.5148768268535e-05 0.0 0.1216954281224829 7793.571523136417 35.45064832893028 4536.356023833688 4619.5197005109785 8.303329765663977e-09 8.080747713785257 -1.910213500849002 KS(ph)SPQSTDTAMDLLK ddPTM_A549_PD325901_60min_R1 2 KSSPQSTDTAMDLLK 15 1 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 KS(0.476)S(0.476)PQS(0.038)T(0.009)DT(0.001)AMDLLK;KS(0.583)S(0.388)PQS(0.012)T(0.017)DTAMDLLK 86.74799999999999 1.1453e-05 26200000.0 6170.4 6436.4 5877.0 5875.1 7287.5 6879.9 6425.7 7519.200000000001 7536.9 7926.1 7650.7 True False 6796.814465591606 6978.818016547765 6275.84856127194 6237.991583679802 6775.651140510173 6823.872375423572 6670.2335297779555 7369.223657301714 7220.1503032757655 7425.644693323316 6709.712401783185 1.0129814899048837 1.0401068777095517 0.9353379378233945 0.929695821541022 1.0098273569384977 1.017014138133558 0.9941161603298023 1.0982920304219383 1.0760744829177664 1.106700890987498 1.0 12.712035214215218 -7.608244065169246 1.6643443957241821 1.0405542771083673 0.983060298778882 0.34603683711314037 0.04479336679829567 0.4106173702270664 2.3001202640571212 0.007620753411045225 0.012585156357710474 2.4646538597667457e-08 7.608244065169246 -0.05749397832948533 KS(ph)SPSTGSLDSGNESK ddPTM_A549_MK2206_60min_R1 1 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 KS(0.476)S(0.476)PS(0.022)T(0.022)GS(0.005)LDSGNESK 69.763 0.00066689 7340400.0 968.19 1184.1 1001.8 1098.1 1564.1 848.29 942.36 1012.1 1440.5 1725.5 1799.5 True False 1131.5968020271473 1244.3656322999775 1143.8703039537031 1367.1345492955813 1334.022961950741 938.055484750671 1113.5746138945822 1155.5682744262563 1114.2290500058132 1335.7083515882043 1352.6344863265622 0.836587277247602 0.9199570503923662 0.8456610529428289 1.0107198678694034 0.9862405368457183 0.6935025642427686 0.823263509212152 0.8543093393726109 0.8237473325345991 0.9874865420707073 1.0 10.401556326485473 -10.866055238134612 1.1121460014342393 1.0000351573300486 0.8650942659030363 0.2661200066523125 0.08162986632340563 0.5674382430006649 1.2453648984796253 0.059015237117192657 0.014287282525026571 1.3612715306406867e-11 10.866055238134612 -0.13494089142701227 KS(ph)SPSVKPAVDPAAAK ddPTM_A549_MK2206_60min_R1 3 KSSPSVKPAVDPAAAK 16 2 H3BV90;Q6FI81-3;Q6FI81;H3BT65;H3BPG7 H3BV90 CIAPIN1 Anamorsin 1 KS(0.728)S(0.268)PS(0.005)VKPAVDPAAAK;KS(0.572)S(0.418)PS(0.009)VKPAVDPAAAK;KS(0.463)S(0.463)PS(0.073)VKPAVDPAAAK 146.13 4.2121e-15 251213000.0 18656.0 19094.399999999998 17489.6 16525.8 24624.6 18693.9 19284.399999999998 19550.6 24811.899999999998 25543.3 26422.399999999998 True False 21804.67670459153 20066.22340122347 19969.88826914423 20574.62174187136 21002.35396001037 20672.076089993476 22788.125858683183 22321.957421201434 19192.044266462497 19773.050789407695 19860.988858857992 1.0978646058132524 1.0103335510544804 1.0054830809815227 1.0359313873082954 1.057467687498517 1.0408382098645474 1.1473812316509955 1.123909669343873 0.9663186663489242 0.9955723216968083 1.0 14.277649834553447 -8.783926924575198 24.999912887477862 0.9840949172896283 1.0618354590582777 0.3930240302619784 0.042777561537093986 180.80625967121375 201005.5356882666 0.008048073358045733 0.008570743306751933 1.6446484324001762e-09 8.783926924575198 0.07774054176864942 KS(ph)SPSVKPAVDPAAAK ddPTM_A549_PD325901_60min_R1 3 KSSPSVKPAVDPAAAK 16 2 H3BV90;Q6FI81-3;Q6FI81;H3BT65;H3BPG7 H3BV90 CIAPIN1 Anamorsin 1 KS(0.554)S(0.393)PS(0.053)VKPAVDPAAAK;KS(0.673)S(0.32)PS(0.007)VKPAVDPAAAK;KS(0.492)S(0.492)PS(0.016)VKPAVDPAAAK 122.01 2.5244e-08 514795000.0 12162.5 13404.3 13203.0 12284.9 15093.599999999999 14718.5 15390.3 14918.399999999998 14451.8 13305.8 15861.9 True False 13397.228046440723 14533.92740339494 14099.03497608871 13043.7103719678 14033.477606093227 14598.637415903127 15975.98628839531 14620.840808741597 13844.441103488258 12465.669517217964 13910.986856868603 0.9630681262433793 1.0447804712157254 1.0135179567887562 0.9376552868732974 1.008805324200572 1.0494321909803972 1.148443777050016 1.0510282957763346 0.9952163168533591 0.8961024581130268 1.0 13.763937149034835 -5.233684609203918 22.203391895820783 1.013808848671456 0.9630677972621117 0.05410456400541719 0.06175888751915196 4524.332459963101 3619131.938651093 0.007372433694728592 0.7172156361966674 5.838689642495334e-06 5.233684609203918 -0.05074105140934437 KS(ph)SSGSSDSKESMSTVPADFETDESVLMR ddPTM_A549_MK2206_60min_R1 1 KSSSGSSDSKESMSTVPADFETDESVLMR 29 2 F8W8D3;Q14493;E7EUV9;H0YAE8;Q14493-2;H7C4H8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 KS(0.345)S(0.345)S(0.08)GS(0.08)S(0.08)DS(0.017)KES(0.017)MS(0.017)T(0.017)VPADFETDESVLMR 55.033 0.0010670999999999999 1815700.0 627.39 1134.7 993.7 681.64 1295.8 742.07 515.63 782.21 1511.2 926.92 1609.3 True False 733.2780937871826 1192.4513833044377 1134.621602154917 848.6418305999824 1105.1895365358798 820.5953548538006 609.3132965771717 893.090662917658 1168.915612890514 717.5281282261016 1209.6663955795148 0.6061820816605318 0.9857687934971279 0.9379624054211689 0.7015503065152303 0.9136316761171305 0.6783650086110543 0.5037035820816268 0.7382950094185308 0.9663123793155565 0.5931619914781178 1.0 10.240393517449167 -8.788809487427097 7.268022449913549 0.9845199449285724 0.7638595479921028 0.0 0.1809209326260165 0.15293004401414165 28.809484456354777 0.02447919261876692 0.02626743047362154 1.6262619939429999e-09 8.788809487427097 -0.22066039693646966 KS(ph)SSISEEKGDS(ph)DDEKPR ddPTM_A549_PD325901_60min_R1 1 KSSSISEEKGDSDDEKPR 18 3 S4R3H4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 KS(0.344)S(0.308)S(0.344)IS(0.009)EEKGDS(0.995)DDEKPR 74.748 0.0001739 24781000.0 3206.0 3554.8 3049.9 3545.6 3970.1 3947.5 3479.5 3715.4 4104.9 3736.9 3505.1 True False 3531.4707598675395 3854.375471571687 3256.8845545385884 3764.6036593581557 3691.2538721014685 3915.352868789453 3611.9142765554598 3641.2934323250875 3932.3853281742713 3500.951496256656 3073.9949206595784 1.1488212736245518 1.2538652701302007 1.0594957501880868 1.224661639502773 1.200800250935173 1.2737018016768054 1.1749903203419938 1.184547641199025 1.2792426239046975 1.1388930647632516 1.0 11.585899065843897 -10.916554234474377 1.135965288399949 0.9984704559342671 1.2057647659626538 0.267697585900334 0.07112522528200944 0.2633740672337367 0.5963676787289868 0.04343534032534931 0.009975145178176879 1.2118413451934164e-11 10.916554234474377 0.20729431002838672 KS(ph)SSLESLQTAVAEVR ddPTM_A549_MK2206_60min_R1 1 KSSSLESLQTAVAEVR 16 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 KS(0.39)S(0.39)S(0.219)LESLQTAVAEVR 89.66799999999999 4.7025e-06 4089900.0 843.79 880.98 1011.3 602.04 1295.6 1158.7 1030.6 780.7 1547.9 1360.5 1514.5 True False 986.2011233151411 925.8181190301793 1154.7175468041328 749.539827026603 1105.018956270942 1281.3128649171897 1217.8466796975213 891.3666157934774 1197.3031214883708 1053.1621050917138 1138.4078519264121 0.8662985955747696 0.813256968900479 1.0143267589468232 0.658410626523906 0.9706705328859341 1.125530593230672 1.0697806393698732 0.782994086245196 1.0517347710333307 0.9251184479354692 1.0 10.152801802356118 -6.9823353960500185 24.984865683897908 1.016302364227464 0.8445964465611574 0.2769139793930261 0.11440990829564801 200.13624745099423 283071.76773820975 0.01512317923256406 0.028576528167437453 1.0415127813768221e-07 6.9823353960500185 -0.1717059176663066 KS(ph)SSLESLQTAVAEVR ddPTM_A549_PD325901_60min_R1 1 KSSSLESLQTAVAEVR 16 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 KS(0.333)S(0.333)S(0.333)LESLQTAVAEVR 125.88 7.943100000000001e-09 4656600.0 1735.0 1945.0 1537.5 1352.5 1939.8 1390.2 1714.2 1558.9 1726.8 1442.3 1956.7 True False 1911.1359227605078 2108.911975978094 1641.8439957385754 1436.0408532496356 1803.5551399467092 1378.878672119341 1779.4348190462322 1527.8065165666078 1654.2286011087574 1351.2329318555423 1716.038304543264 1.1136907129058349 1.2289422505282572 0.956764188416857 0.8368349642590572 1.0509993484246485 0.8035244134520292 1.036943531117647 0.89031026435814 0.9639811633161897 0.7874142018147915 1.0 10.744866040971482 -5.770424400414066 24.866042242450018 0.9616067128676693 1.1713164854866065 0.47133818644063374 0.09428945206508926 83.25503572997746 230411.2211083445 0.00988104028876834 0.031383898292037145 1.696584908691773e-06 5.770424400414066 0.2097097726189372 KS(ph)SSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK ddPTM_A549_MK2206_60min_R1 1 KSSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK 35 2 A0A2R8YFC5;A0A2R8YHG5;Q9BZV2 A0A2R8YFC5 SLC19A3 Thiamine transporter 2 1 KS(0.333)S(0.333)S(0.333)VNPVLEETHEGEAPGCEEQKPTSEILSTSGK 117.29 2.4635e-21 9039500.0 664.86 1026.5 801.37 957.13 1384.5 1096.2 906.81 802.36 1174.4 1372.7 1516.0 True False 777.0721137336363 1078.7444654640046 915.0163161103802 1191.6268929671987 1180.8418840360596 1212.1991564013317 1071.5656390612353 916.0969871244446 908.4002751314313 1062.6061166184452 1139.5353605285188 0.6819201410066194 0.9466529103262585 0.802973165910353 1.045712958318836 1.0362485666863226 1.0637661615336897 0.9403531265271496 0.8039215094646619 0.7971672548275407 0.9324906917549327 1.0 10.154229977731838 -5.2576320107645005 24.291215727828714 0.9212636152981311 0.6819200012299794 0.36281914247154856 0.09511349978306011 260.7455590742829 1663462.4712742153 0.01520074878999264 0.15682869916978143 5.525454273819609e-06 5.2576320107645005 -0.23934361406815163 KS(ph)SSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK ddPTM_A549_PD325901_60min_R1 1 KSSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK 35 2 A0A2R8YFC5;A0A2R8YHG5;Q9BZV2 A0A2R8YFC5 SLC19A3 Thiamine transporter 2 1 KS(0.333)S(0.333)S(0.333)VNPVLEETHEGEAPGCEEQKPTSEILSTSGK 204.72 1.5319e-89 19123000.0 1600.7 1352.0 1557.2 1918.8 1728.6 1543.9 1475.1 1940.5 1328.2 1429.3 1740.3 True False 1763.2018856269406 1465.937784844412 1662.8809562042982 2037.3199180890197 1607.1890993462628 1531.3269902784132 1531.2357377056924 1901.7952052072003 1272.3803729399174 1339.0537540741354 1526.2541326706414 1.1552479026161178 0.9604807963922182 1.0895177419074942 1.3348497307745957 1.05302849960773 1.0033237306285916 1.0032639420450473 1.2460540905330337 0.8336621966837886 0.8773465214020797 1.0 10.575779486295973 -8.773383598817512 24.999971941577673 0.9214515957017455 1.0993921352003766 0.3924887199751632 0.11115316111187261 190.98330676564797 399738.4736557916 0.020478090648758305 0.021882874978507647 1.6850640032216567e-09 8.773383598817512 0.1779405394986311 KS(ph)SSYSSSSTTVK ddPTM_A549_MK2206_60min_R1 2 KSSSYSSSSTTVK 13 1 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 KS(0.489)S(0.489)S(0.018)YS(0.003)S(0.001)SSTTVK;KS(0.491)S(0.491)S(0.016)YS(0.001)SSSTTVK 81.428 0.00025459 13599400.0 2158.81 3416.8 3230.0 1934.12 3833.0 2874.4 2093.1 2309.2 3249.3999999999996 3693.4 3871.0 True False 2523.1643501629073 3590.700525667227 3688.0625691460004 2407.979486825947 3269.170777544396 3178.5671001277 2473.3891764747555 2636.5361716284065 2513.41608822554 2859.058374822297 2909.723865835023 0.8671490720439268 1.2340348057862114 1.2674957278420689 0.8275628883893809 1.1235329977287107 1.092394758639932 0.8500425781004309 0.9061121581280298 0.8637988359435779 0.9825875260509691 1.0 11.506666531853057 -7.7468779300445245 24.970951967140305 0.9255217135641988 1.076778989913628 0.23974471430306732 0.13082691979490269 262.6633365484084 450431.5335754353 0.01980309619706604 0.029300861957936564 1.791109221928727e-08 7.7468779300445245 0.1512572763494292 KS(ph)SSYSSSSTTVK ddPTM_A549_PD325901_60min_R1 3 KSSSYSSSSTTVK 13 1 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 KS(0.474)S(0.474)S(0.023)Y(0.02)S(0.005)S(0.001)S(0.001)STTVK;KS(0.382)S(0.382)S(0.234)YS(0.002)SSSTTVK;KS(0.245)S(0.245)S(0.245)Y(0.215)S(0.02)S(0.026)S(0.002)STTVK 118.47 5.7077e-06 130844400.0 4435.32 4834.2 4582.75 4581.3099999999995 5259.21 5542.389999999999 4378.54 5215.82 5147.04 5469.43 5605.1 True False 4885.590421289985 5241.594999626375 4893.7629733144395 4864.287113790081 4889.821232889542 5497.254613413545 4545.167735729023 5111.786378368366 4930.727808113745 5124.089256381236 4915.708233656387 0.9938731489065615 1.0662949773419705 0.9955356869653705 0.9895394280087169 0.994733820736226 1.1183036812021272 0.924621136911588 1.0398880762225655 1.0030554243139418 1.0423908443747996 1.0 12.263183573369266 KS(ph)STFPR ddPTM_A549_PD325901_60min_R1 1 KSSTFPR 7 1 Q9P2M4 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 KS(0.333)S(0.333)T(0.333)FPR 48.794 0.023499000000000003 5611300.0 1564.3 1934.3 2084.9 2097.5 2416.3 2153.4 2340.8 1972.2 2261.6 2362.3 2432.8 True False 1723.106584423205 2097.3102494264394 2226.393851522182 2227.057811231875 2246.5874237824696 2135.8634243574934 2429.880424934911 1932.8629238390295 2166.552816925854 2213.14397484736 2133.581022789828 0.8076124440636923 0.9830000487556074 1.0435009628136802 1.0438121577964818 1.0529656009242512 1.0010697515319484 1.1388742208428757 0.9059243137210026 1.0154537342542131 1.0372908041493063 1.0 11.059061182619711 -5.2745726678294185 3.392324458849981 1.0163147387936322 0.7835923029474967 0.5782138321590449 0.05312623328855529 0.1498080306288684 2.895371163238368 0.0066619836344140706 0.08830895528980201 5.314070749838371e-06 5.2745726678294185 -0.2327224358461355 KS(ph)STGEASENGLEDIDR ddPTM_A549_MK2206_60min_R1 1 KSSTGEASENGLEDIDR 17 1 H3BS87;H3BMJ8;Q9H7D3;H3BSP8;H3BTU3;Q9BQ70 H3BS87 TCF25 Transcription factor 25 1 KS(0.497)S(0.497)T(0.005)GEAS(0.001)ENGLEDIDR 89.87299999999999 2.6506e-06 6078300.0 1606.2 2008.5 1278.8 1289.1 1540.9 1150.2 1476.0 1375.7 1810.5 1761.1 1606.1 True False 1877.2872921802582 2110.7240710028773 1460.1530691714863 1604.9295578698977 1314.2356512178874 1271.9134005590317 1744.1700943465378 1570.709687904555 1400.4246407744022 1363.2662868629302 1207.261043895022 1.5549969923021043 1.7483576411883428 1.2094758433193133 1.3293972881721305 1.088609342497899 1.0535529221214823 1.4447331860549977 1.3010522420544008 1.1600015157087904 1.1292224608396075 1.0 10.23752194585309 -2.0000000000000004 0.2317124218411931 1.0455600681313293 4.485660238274273 0.4973944347850353 0.15606852735962018 24.856098443673613 0.2944875949867039 0.08828051861811644 33.00149583971055 0.00999999999999999 2.0000000000000004 3.4401001701429443 KS(ph)STPEEVK ddPTM_A549_PD325901_60min_R1 1 KSSTPEEVK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 KS(0.485)S(0.485)T(0.03)PEEVK 47.915 0.013977000000000002 17236000.0 2836.2 2763.5 3046.3 3854.0 3746.3 3433.1 3271.9 3587.5 4303.5 4744.0 5118.2 True False 3124.1289360999144 2996.3898435040937 3253.040236890029 4092.0528269309402 3483.172812033381 3405.1419718406787 3396.41394495238 3515.944498160695 4122.638860824374 4444.463030383895 4488.693846942981 0.695999558585979 0.6675415935405756 0.7247186704670242 0.911635537299526 0.775988055947632 0.7586041926561212 0.7566597457444115 0.7832889963202156 0.9184495537899277 0.9901461721232762 1.0 12.132079984711616 -8.892400325101258 1.2093387766005452 0.9760645487670271 0.75408579483108 0.7096512739159021 0.06037092624241862 0.170846980096002 0.5014116389368787 0.014078497072349528 0.014143636340013461 1.281149097244017e-09 8.892400325101258 -0.22197875393594713 KS(ph)STPEEVKK ddPTM_A549_MK2206_60min_R1 1 KSSTPEEVKK 10 2 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 KS(0.452)S(0.342)T(0.206)PEEVKK 43.99100000000001 0.012623 6507600.0 3127.4 2938.2 2910.1 2421.8 3674.7 2869.1 2318.2 2174.7 3287.3 3553.2 3338.0 True False 3655.228662410997 3087.7418299331116 3322.7959388457507 3015.1411087187325 3134.156497845654 3172.706257645555 2739.386932733159 2482.9703847394308 2542.731798739402 2750.5296521954265 2509.082475886671 1.4567989285084364 1.2306258800209233 1.3243071803255593 1.2016907127188907 1.24912454172639 1.2644886280688599 1.0917883166694637 0.9895929721728208 1.0134110070817182 1.0962292705118957 1.0 11.292944178923344 -7.856539120366994 2.3151843341475478 1.0049784369209944 1.2859778308739127 0.7704127990267101 0.06826093298893476 0.08332996367150376 0.9133232245926014 0.009384268368528828 0.013659534177308667 1.3914284521436893e-08 7.856539120366994 0.2809993939529183 KS(ph)STSGSDFDTK ddPTM_A549_PD325901_60min_R1 2 KSSTSGSDFDTK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KS(0.496)S(0.496)T(0.007)S(0.001)GSDFDTK;KS(0.712)S(0.257)T(0.028)S(0.004)GS(0.001)DFDTK 113.65 2.4663e-05 6696300.0 1828.38 2040.67 1998.58 1905.86 2313.66 1869.62 2470.8 2182.1 2331.21 2604.8 2951.5 True False 2013.995791617785 2212.644422631989 2134.215657237855 2023.5806436778928 2151.1565032936915 1854.394434590535 2564.8276460736397 2138.576303675665 2233.2373507011484 2440.33248346205 2588.484211100039 0.778059909726816 0.8548031365784041 0.8245040275253865 0.7817627919074397 0.8310487249908723 0.7164016788815819 0.9908608424478874 0.8261886607246582 0.8627587300415018 0.9427650642014044 1.0 11.337891802923842 -10.954711081699823 0.25944074124071187 1.1074667829496572 0.7970116512554903 0.45044437902296575 0.0632481504105524 3.0648358869849197 0.24292990600301115 0.2967152142427796 0.03921810069734645 1.109912949256658e-11 10.954711081699823 -0.31045513169416683 KS(ph)STSGSDFDTKK ddPTM_A549_MK2206_60min_R1 3 KSSTSGSDFDTKK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KS(0.27)S(0.264)T(0.223)S(0.223)GS(0.021)DFDTKK;KS(0.485)S(0.485)T(0.016)S(0.006)GS(0.007)DFDTKK;KS(0.417)S(0.417)T(0.056)S(0.056)GS(0.056)DFDTKK 45.434 0.0099881 29776400.0 4666.05 4786.110000000001 4047.04 4201.81 6414.200000000001 4816.93 4463.360000000001 3969.88 7225.7 6634.2 7071.9 True False 5453.565166030194 5029.702555871334 4620.971126884401 5231.253638626416 5470.679676839363 5326.654335380645 5274.294737332363 4532.622647247608 5589.090487071851 5135.529612347993 5315.752055489201 1.0259254211073827 0.9461883292087554 0.8692977171711106 0.9841041463219623 1.0291450052095976 1.002050938376666 0.992201043667184 0.8526775891601434 1.051420462942848 0.9660965294731712 1.0 12.376058098708384 KS(ph)STSGSDFDTKK ddPTM_A549_PD325901_60min_R1 3 KSSTSGSDFDTKK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KS(0.477)S(0.477)T(0.032)S(0.011)GS(0.003)DFDTKK;KS(0.535)S(0.439)T(0.009)S(0.009)GS(0.009)DFDTKK;KS(0.575)S(0.409)T(0.012)S(0.002)GS(0.002)DFDTKK 63.128 0.0021915 33036300.0 6195.8 5785.8 7180.9 6127.5 6357.4 6419.700000000001 6388.0 6720.0 7792.0 6632.8 8339.5 True False 6824.793054893114 6273.389671266867 7668.239056259598 6505.981758437816 5910.878155839364 6367.420091644752 6631.098835647728 6585.964328261986 7464.5293374099065 6214.003876039271 7313.7943684461325 0.9331398602532887 0.8577476143343763 1.0484624901873978 0.8895494500784082 0.8081821634664268 0.8706041995268121 0.9066564496612382 0.9004853016753903 1.0206096810178433 0.8496279171927936 1.0 12.836404349707049 -8.758063877859454 24.907281783589195 1.0097323530067608 0.9008561546398407 0.0 0.07397785529209722 56.48882308065151 416821.134943764 0.009632195456290193 0.010703719996922047 1.7455653889370886e-09 8.758063877859454 -0.10887619836692009 KS(ph)STTLR ddPTM_A549_MK2206_60min_R1 1 KSSTTLR 7 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 KS(0.756)S(0.225)T(0.017)T(0.002)LR 55.461000000000006 0.032132 19065000.0 4602.6 4441.4 4015.2 3385.4 5139.3 4419.4 4196.7 4276.6 5491.9 6891.4 6298.7 True False 5379.406357233758 4667.44828924679 4584.615736109909 4214.823151976382 4383.315777989541 4887.057974639704 4959.186067035308 4882.821146538215 4247.993418762185 5334.627953714838 4734.5589547236 1.1362000998776882 0.9858253606896468 0.968330055650887 0.8902250858596479 0.9258129046247002 1.0322097625934001 1.0474441472711202 1.0313148897780005 0.8972310746123509 1.1267423227231246 1.0 12.209014323139495 -8.74527866916054 24.999109061912712 0.951470220995135 0.9967311348148771 0.0 0.08409626889079067 505.30050711046573 781652.4156263912 0.012333746994582225 0.013964346347216518 1.797717022840427e-09 8.74527866916054 0.045260913819742066 KS(ph)STVATLQGTPDHGDPR ddPTM_A549_MK2206_60min_R1 3 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KS(0.357)S(0.357)T(0.286)VAT(0.001)LQGTPDHGDPR;KS(0.579)S(0.35)T(0.071)VATLQGTPDHGDPR;KS(0.58)S(0.35)T(0.07)VATLQGTPDHGDPR 179.5 8.5084e-32 68764000.0 11454.2 12012.7 12989.3 11435.3 15308.1 11382.400000000001 10281.9 10844.099999999999 17965.3 17376.4 17203.199999999997 True False 13387.388931696622 12624.095119609787 14831.378058640283 14236.94901335013 13056.298768517452 12586.878012974377 12149.988138930663 12381.28438366344 13896.188234688954 13451.059171566087 12931.170655833908 1.0352805084709704 0.9762530752708314 1.146947825017613 1.1009791295985347 1.0096764721473297 0.9733749826660741 0.9395891881953615 0.9574759094280156 1.074627240219715 1.040204288503271 1.0 13.658565267452143 -6.786858108373318 24.87618014728124 1.0164246102372525 1.0643987649061102 0.21599973166032593 0.05416325180920686 355.4417634564037 347854.21678444603 0.008975615313790312 0.016966745401657792 1.6335855817856893e-07 6.786858108373318 0.04797415466885768 KS(ph)STVATLQGTPDHGDPR ddPTM_A549_PD325901_60min_R1 1 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KS(0.429)S(0.429)T(0.142)VATLQGTPDHGDPR 151.42 5.7439e-18 115020000.0 2183.6 2040.3 3103.1 2595.2 2946.3 2943.9 3345.4 3173.4 3760.5 3344.3 3639.2 True False 2405.2774645186414 2212.243241433474 3313.695026456175 2755.4996098731654 2739.362052183208 2919.925854446935 3472.7110276731214 3110.1040475158607 3602.459262491011 3133.140327258193 3191.601470789515 0.7536271325014904 0.6931452005147201 1.0382546369852554 0.8633595500855343 0.8583032929564244 0.9148779636715184 1.0880779005325083 0.9744650376873356 1.1287309194026223 0.981682818463904 1.0 11.640064800880566 -6.0132376067757445 0.4440509240828871 1.0605385050108835 0.6330852882752367 0.5176990790959775 0.0894256472023829 1.478187845279315 0.2935530405223064 0.02172152286855362 0.2942257653190156 9.699791369366513e-07 6.0132376067757445 -0.42745321673564685 KS(ph)STVMK ddPTM_A549_MK2206_60min_R1 1 KSSTVMK 7 1 Q15139;F8WBA3 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 KS(0.604)S(0.385)T(0.011)VMK 56.563 0.015600999999999999 5574300.0 3513.9 2830.1 2405.5 2185.5 4675.6 3445.3 3676.2 3437.2 5399.8 3793.7 3953.1 True False 4106.9604133932335 2974.140001665541 2746.6360712324145 2720.947598110823 3987.825433729869 3809.879359194953 4344.117954496437 3924.4336259835272 4176.753921708707 2936.700535160922 2971.4361699902934 1.3821466046859925 1.0009099410253381 0.9243463140725606 0.9157011769563643 1.3420532044418427 1.2821676594208646 1.461959034614103 1.3207194775435298 1.4056347445357882 0.9883101527873355 1.0 11.536944675125188 -6.76612819034202 24.998516950071252 1.242057108193811 1.0424691687779313 0.21768176431540298 0.18166419234335487 159.57541906302507 850786.6231998906 0.029591889968483134 0.05724230846257598 1.7134514748083057e-07 6.76612819034202 -0.1995879394158797 KS(ph)SVNGSSATSSG ddPTM_A549_MK2206_60min_R1 2 KSSVNGSSATSSG 13 1 R4GMX3;P35226 R4GMX3 COMMD3-BMI1;BMI1 Polycomb complex protein BMI-1 1 KS(0.676)S(0.322)VNGS(0.002)SATSSG;KS(0.498)S(0.498)VNGS(0.004)SATSSG 151.74 3.8753e-13 108939000.0 2533.96 2766.23 2074.21 1872.0100000000002 2380.45 2592.17 2106.86 2383.7200000000003 3444.6200000000003 3359.43 3744.48 True False 2961.630498626005 2907.01929147637 2368.364167662018 2330.652534037724 2030.2889583630474 2866.4717088568127 2489.649190362431 2721.6196098363353 2664.41906992782 2600.532429774536 2814.6222736093823 1.0522301789462158 1.032827501840416 0.841450090787814 0.8280516202442216 0.7213362082008501 1.0184214541800454 0.8845411385058727 0.9669573197636273 0.9466346851974043 0.9239365630542302 1.0 11.458725608191372 -9.120949749908238 0.7201775082728462 0.9888944251367892 0.9071918620738811 0.02622876422305742 0.09582906765193137 1.0447474148974494 1.1755400855368667 0.0304745974176425 0.02469379700065353 7.569204695223299e-10 9.120949749908238 -0.08170256306290802 KS(ph)TAALEEDAQILK ddPTM_A549_MK2206_60min_R1 6 KSTAALEEDAQILK 14 1 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 KS(0.909)T(0.091)AALEEDAQILK;KS(0.504)T(0.496)AALEEDAQILK;KS(0.707)T(0.293)AALEEDAQILK;KS(0.972)T(0.028)AALEEDAQILK;KS(0.707)T(0.293)AALEEDAQILK;KS(0.909)T(0.091)AALEEDAQILK 161.8 1.2323e-19 61273400.0 8876.66 10183.600000000002 9757.4 8422.55 13960.2 10311.199999999999 8533.1 10610.699999999999 14368.8 12521.2 13247.3 True False 10374.823194499319 10701.901742327562 11141.146040924195 10486.075128102635 11906.673072965115 11402.32433997939 10083.45381576453 12114.799218905917 11114.289742258616 9692.652223648922 9957.629803119687 1.0418968569457088 1.0747438852340843 1.1188552156692666 1.0530693885423805 1.195733654331556 1.1450841782054486 1.0126359399910028 1.2166348276083125 1.11615815831761 0.9733894928100512 1.0 13.281586665688556 -10.587018176592792 0.94620415756313 1.0019324745285385 1.1092508068556897 0.3662112986674285 0.06034502053832084 0.5069492261081268 0.8321767600965434 0.03517883280026421 0.010437537741393789 2.588104592552404e-11 10.587018176592792 0.10731833232715116 KS(ph)TAALEEDAQILK ddPTM_A549_PD325901_60min_R1 4 KSTAALEEDAQILK 14 1 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 KS(0.999)T(0.001)AALEEDAQILK;KS(0.798)T(0.202)AALEEDAQILK;KS(0.753)T(0.247)AALEEDAQILK;KS(0.974)T(0.026)AALEEDAQILK 196.05 1.3692999999999998e-31 107169700.0 20895.100000000002 21984.6 25258.300000000003 22080.5 25919.4 22450.3 23581.899999999998 23643.1 24760.3 24931.0 26215.2 True False 23016.355169840386 23837.319396960396 26972.480128496696 23444.36233654608 24098.910761075735 22267.472200173255 24479.322109010813 23171.51982284687 23719.710697262646 23356.85240524891 22990.896591844714 1.0011073329782494 1.0368155631397136 1.1731808727313542 1.0197237085943929 1.048193604142609 0.9685343114488162 1.064739776946936 1.0078562934803605 1.031700116718217 1.0159174224433685 1.0 14.488775108475739 -6.467711325918395 24.999970025988254 1.017548398305024 1.0719192923939043 0.19782165897363468 0.04540110435269685 331.3118673944701 150138.52399423084 0.006017794380593414 0.013984019733404922 3.4063453309642843e-07 6.467711325918395 0.054370894088880295 KS(ph)TEFPR ddPTM_A549_MK2206_60min_R1 2 KSTEFPR 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KS(0.957)T(0.043)EFPR;KS(0.965)T(0.035)EFPR 59.426 0.013430000000000001 3347800.0 1265.1 1141.6 1151.1 1155.9 1540.5 1264.7 1403.6 1283.5 2084.3 1829.2 1711.8 True False 1478.6179512745887 1199.7025638321554 1314.3432889609787 1439.095551890322 1313.89449068801 1398.5297145600841 1658.615951507317 1465.4400555538969 1612.2093779431575 1415.982449565426 1286.712816723429 1.14914371882907 0.9323778765856687 1.0214736900716586 1.1184279298273647 1.0211248956342864 1.0869012077779665 1.2890335201066287 1.1389021983052838 1.2529675285652278 1.1004650230897504 1.0 10.32947437697626 -7.52652238161253 24.993304584827346 1.1380882488513397 1.0453974851085504 0.2415576963168763 0.08867608228817038 171.9489229065404 1179467.878399833 0.01711976186264922 0.02546236706965384 2.9749359399186702e-08 7.52652238161253 -0.0926907637427894 KS(ph)TEFPR ddPTM_A549_PD325901_60min_R1 2 KSTEFPR 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KS(0.974)T(0.026)EFPR;KS(0.923)T(0.077)EFPR 72.607 0.008212299999999999 22802000.0 4818.9 4317.9 4289.9 3766.9 5299.0 4341.5 3986.6000000000004 4471.7 4415.9 4789.5 5269.4 True False 5308.11118051332 4681.784586671371 4581.038411264331 3999.5728577493896 4926.81652055759 4306.144263419738 4138.312244551226 4382.508435519215 4230.315079705907 4487.090152618815 4621.297205478752 1.1486193041686041 1.0130888316641715 0.9912884213188685 0.865465405039892 1.0661111591603827 0.9318042255136963 0.8954871458267333 0.948328627365398 0.9153955895090844 0.9709590085007239 1.0 12.17408215994499 -5.209950801441845 1.609859195460716 0.9541149435918002 1.2365510445620331 0.5528276192313865 0.051487133892969494 0.6845211519240468 1.5042760115704743 0.007423973263542375 0.3126697364689048 6.166648560840249e-06 5.209950801441845 0.282436100970233 KS(ph)TGQLNLSTSPINSSSYLGYNSNAR ddPTM_A549_MK2206_60min_R1 1 KSTGQLNLSTSPINSSSYLGYNSNAR 26 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 KS(0.834)T(0.166)GQLNLSTSPINSSSYLGYNSNAR 76.891 2.4507e-06 1922700.0 494.93 595.8 677.2 884.6 812.57 746.03 667.9 637.22 880.18 873.54 1056.9 True False 578.4620841232567 626.1236751324442 773.2371429800842 1101.3270397112026 693.0420294049702 824.9743994253652 789.2487845623659 727.5478864044054 680.8206353586372 676.206707300122 794.4425610439255 0.7281358181051342 0.7881295713936771 0.9733078020946201 1.3862890707466882 0.8723626645761383 1.0384317757866846 0.9934623637551157 0.9157967134192583 0.856979055180547 0.8511712997999032 1.0 9.633799104889503 -5.7040022602596485 4.736842446566493 0.9695966485510291 0.7468930483246458 0.27735583423084176 0.14130852451075177 0.20764699843960877 9.321347917730101 0.019452434590688062 0.07909949782860352 1.9769593511184194e-06 5.7040022602596485 -0.22270360022638336 KS(ph)TGQLNLSTSPINSSSYLGYNSNAR ddPTM_A549_PD325901_60min_R1 2 KSTGQLNLSTSPINSSSYLGYNSNAR 26 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 KS(0.821)T(0.179)GQLNLSTSPINSSSYLGYNSNAR;KS(0.492)T(0.492)GQLNLS(0.013)T(0.001)S(0.001)PINSSSYLGYNSNAR 111.52 4.6574e-13 7379800.0 1822.9499999999998 2098.52 2275.79 1773.73 3051.9 2409.95 2343.0 2149.55 2205.4 2116.16 2192.8199999999997 True False 2008.0145420151382 2275.3696451565797 2430.2387948370038 1883.2892736668964 2837.5450724834304 2390.3241662163773 2432.1641471387957 2106.675538960647 2112.714707485089 1982.545296453875 1923.117041431266 1.0441457793544837 1.1831675327795714 1.2636978106274364 0.9792899928052595 1.4754926566360247 1.2429426367296894 1.2646989729385762 1.095448427513683 1.0985887296348413 1.0309020479473157 1.0 10.909230852828237 -8.889886378004526 1.149673734057793 1.0315793523230543 1.2087246827347946 0.2560480049295163 0.12317807727735933 0.40779041169643687 1.0840023195630188 0.026315330759688983 0.02635188176422926 1.2885866331895217e-09 8.889886378004526 0.1771453304117403 KS(ph)VSSPTSSNTPTPTK ddPTM_A549_MK2206_60min_R1 2 KSVSSPTSSNTPTPTK 16 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 KS(0.967)VS(0.012)S(0.02)PT(0.001)SSNTPTPTK;KS(0.285)VS(0.172)S(0.198)PT(0.263)S(0.035)S(0.039)NT(0.007)PTPTK 138.28 4.3411000000000004e-11 22467000.0 3579.8 4844.6 3821.3999999999996 3133.2 5481.9 3936.7 3192.8 4153.8 5537.1 5806.3 5389.2 True False 4183.9827222929225 5091.169447040346 4363.331981961153 3900.8341406546915 4675.519771829016 4353.278981030029 3772.89043172739 4742.613870478985 4282.955690931752 4494.652797349515 4050.9129056466295 1.0328493403205004 1.2567955830261588 1.077123128438293 0.96295186579234 1.1541891619816702 1.0746414653748608 0.9313679458445775 1.170751872711996 1.057281603107703 1.1095407139176825 1.0 11.984031352174112 -2.000084966382823 0.015010240245060452 0.24760328095401 2.0742238629654906 0.0 0.09199131193592254 5911.533591189813 6.66328448704325 322.22817748654103 508.7148249045984 0.009998043768102184 2.000084966382823 1.8266205820114805 KS(ph)VSSPTSSNTPTPTK ddPTM_A549_PD325901_60min_R1 4 KSVSSPTSSNTPTPTK 16 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 KS(0.696)VS(0.108)S(0.196)PTSSNTPTPTK;KS(0.405)VS(0.345)S(0.241)PT(0.007)S(0.002)S(0.001)NTPTPTK;KS(0.92)VS(0.047)S(0.026)PT(0.006)SSNTPTPTK;KS(0.327)VS(0.327)S(0.327)PT(0.006)S(0.006)S(0.006)NT(0.001)PTPTK 163.95 4.213300000000001e-21 74383700.0 8493.160000000002 8658.279999999999 9316.980000000001 9381.85 10483.980000000001 9028.230000000001 9412.47 10252.78 9338.1 9962.880000000001 10939.19 True False 9355.379350866071 9387.943641836298 9949.286290352116 9961.34556677271 9747.621412567532 8954.707088180114 9770.666696551212 10048.280259749688 8945.65213111749 9333.82205652426 9593.738979238833 0.9751546681759239 0.9785489955638899 1.0370603486172283 1.038317343043144 1.0160398811831035 0.9333907361413933 1.0184419982339792 1.0473789501147048 0.9324468958845112 0.9729076512007422 1.0 13.22787747274428 -8.767660627388322 24.99908932164048 0.9680999270221025 1.0051599353261385 0.18443677038664796 0.03472676697316658 208.3530815276626 837231.9683447565 0.006854081588980959 0.00738269418516901 1.7074161013653082e-09 8.767660627388322 0.037060008304035996 KS(ph)WTSSSSLSDTYEPNYGTVK ddPTM_A549_PD325901_60min_R1 1 KSWTSSSSLSDTYEPNYGTVK 21 1 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7;Q8TEU7-5;Q8TEU7-3 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 KS(0.471)WT(0.105)S(0.105)S(0.105)S(0.105)S(0.105)LS(0.004)DTYEPNYGTVK 74.748 3.7607e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSAEPSANTT(ph)LVS(ph)ETEEEGSVPAFGAAAK ddPTM_A549_PD325901_60min_R1 1 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 2 KS(0.032)AEPS(0.079)ANT(0.223)T(0.708)LVS(0.738)ET(0.205)EEEGS(0.015)VPAFGAAAK 58.49 0.00094639 3529600.0 1013.0 919.05 766.31 707.89 519.27 697.02 880.46 1122.8 799.29 988.45 1210.1 True False 1115.8390142688138 996.5015689062552 818.3164047963753 751.6147575651639 482.79826658424946 691.3437002162443 913.966387106199 1100.4048731804394 765.6986209058475 926.0390983100674 1061.2653714559228 1.0514231824393014 0.9389749215497158 0.7710761387359204 0.708225084677966 0.45492699523580127 0.6514333915067892 0.8612043808160366 1.0368800328148104 0.7214959062080817 0.8725801512204794 1.0 10.051569734706717 -10.983634642221094 0.8773389093212475 1.021573918897791 0.7870638079741691 0.06679385275800342 0.16925715967407304 1.1761730617676753 1.3447354985968678 0.20040400633089964 0.03161756318676316 1.0384016218735887e-11 10.983634642221094 -0.23451011092362195 KSAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_A549_MK2206_60min_R1 3 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTTLVS(0.995)ET(0.004)EEEGSVPAFGAAAK;KSAEPS(0.005)ANT(0.021)T(0.085)LVS(0.441)ET(0.441)EEEGS(0.007)VPAFGAAAK;KSAEPSANTT(0.001)LVS(0.788)ET(0.211)EEEGSVPAFGAAAK 258.89 8.272399999999997e-139 400620600.0 5170.68 5902.950000000001 5959.900000000001 5203.3 7830.5 6020.87 5282.58 5401.9400000000005 8198.7 8889.0 8837.58 True False 6043.364373011218 6203.384941462001 6805.103438344656 6478.1087335850125 6678.643823000628 6657.994467069953 6242.356407176918 6167.681537747427 6341.707540633577 6880.968726321382 6642.964981200278 0.9097390081257478 0.9338277349071842 1.0244075435597257 0.9751833333335623 1.0053709212529829 1.0022624665209299 0.9396943119289217 0.9284531162217605 0.9546501537462164 1.0358279391498615 1.0 12.697611593842847 -5.539380695021656 23.364089125690903 0.9777260971736208 0.9157611632775697 0.3476564226969939 0.03284516354444312 74.77012984108339 105862.72927818817 0.004198063526587989 0.016271851504651706 2.888147072712569e-06 5.539380695021656 -0.061964933896051066 KSAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_A549_PD325901_60min_R1 4 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTT(0.001)LVS(0.98)ET(0.018)EEEGSVPAFGAAAK;KSAEPSANTT(0.002)LVS(0.842)ET(0.155)EEEGSVPAFGAAAK;KSAEPSANT(0.005)T(0.032)LVS(0.922)ET(0.041)EEEGSVPAFGAAAK;KSAEPS(0.001)ANT(0.003)T(0.024)LVS(0.936)ET(0.036)EEEGSVPAFGAAAK 224.29 1.8506999999999996e-104 705629500.0 14839.099999999999 14812.199999999999 14244.5 15495.1 16671.5 15857.3 17010.300000000003 17885.7 16458.1 17044.5 18138.7 True False 16345.554508031957 16060.476077420415 15211.217429136997 16452.19713507462 15500.551353552706 15728.163406271064 17657.636274893317 17528.955682439777 15766.423291584439 15968.307361167426 15907.754890692948 1.027521144268771 1.009600423678694 0.9562139681971421 1.034224958086336 0.9744021994342846 0.9887104443300823 1.1100017819123025 1.1019126082144586 0.9911155533838909 1.0038064749482598 1.0 13.957442617693692 -4.210711693572036 15.121770802100809 1.009160425428372 1.0221541634396303 0.0 0.04729534467062916 0.0 0.0 0.006390897315894981 0.0 6.155853935113076e-05 4.210711693572036 0.01299373801125836 KSAEPSANTTLVSET(ph)EEEGSVPAFGAAAK ddPTM_A549_MK2206_60min_R1 3 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTT(0.001)LVS(0.135)ET(0.863)EEEGS(0.001)VPAFGAAAK;KSAEPSANTTLVS(0.011)ET(0.988)EEEGS(0.001)VPAFGAAAK;KSAEPS(0.001)ANT(0.004)T(0.015)LVS(0.475)ET(0.505)EEEGSVPAFGAAAK 140.94 1.1380999999999997e-35 19859500.0 2224.78 2080.54 3012.92 2570.55 3690.24 2374.64 2059.64 2153.87 3614.47 3590.42 3460.2999999999997 True False 2600.2684733512615 2186.430599295159 3440.197360938503 3200.334865396376 3147.4105844313694 2625.9228286415405 2433.84992758801 2459.187668450233 2795.798316122536 2779.3416283450138 2601.012010578386 0.9997141354118704 0.8406076520996009 1.322638014337161 1.2304191031723528 1.2100715304776626 1.009577356029823 0.9357319065384846 0.9454733997569602 1.0748886605490282 1.0685616279514885 1.0 11.3448573458276 -7.297353334183328 23.887300972476783 1.0187822617947746 1.1224453678469362 0.16895144007843643 0.12513418179304775 564.5230598034836 375477.7411556705 0.019622491189936756 0.03136962629693085 5.042508811802707e-08 7.297353334183328 0.10366310605216156 KSAEPSANTTLVSET(ph)EEEGSVPAFGAAAK ddPTM_A549_PD325901_60min_R1 2 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTTLVS(0.021)ET(0.975)EEEGS(0.005)VPAFGAAAK;KSAEPSANTTLVS(0.103)ET(0.664)EEEGS(0.233)VPAFGAAAK 176.36 1.2803e-57 23531000.0 1364.48 1426.44 1786.25 1479.26 1892.8600000000001 1618.4 1757.1799999999998 1951.6799999999998 2159.38 1842.54 2148.38 True False 1503.0010051229142 1546.6511048916152 1907.475666593839 1570.6305305567887 1759.9120436125 1605.2202869788093 1824.0504464657913 1912.7522113366595 2068.6287680462274 1726.2017099501568 1884.1428797028962 0.7977107369691183 0.820877822777167 1.0123837672515696 0.8336047905265316 0.9340650661748191 0.8519631415808183 0.9681062227899719 1.0151842686358663 1.0979150203154562 0.9161734646272449 1.0 10.87969265726822 -8.053242062012 2.327762766920538 1.0459216910159566 0.8793857306352879 0.39573027496385327 0.07169060434563512 0.15577843981088152 1.6773167754503986 0.01049761093470333 0.014347668371811673 8.84622411836159e-09 8.053242062012 -0.16653596038066865 KSAEPSANTTLVSETEEEGSVPAFGAAAK ddPTM_A549_PD325901_60min_R1 1 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 0 96.01899999999999 1.2334e-12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSAPATGGVKKPHR ddPTM_A549_PD325901_60min_R1 1 KSAPATGGVKKPHR 14 3 P68431;Q71DI3;Q16695;Q5TEC6 P68431;Q5TEC6 HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3.1;Histone H3.2;Histone H3.1t;Histone H3 0 36.77 0.042489 5640900.0 2074.0 1886.7 345.52 231.86 2165.8 1812.6 369.63 470.42 2071.9 1694.7 272.69 False True 2284.550953201897 2045.6988303742257 368.969064980548 246.1814656077342 2013.6816796043827 1797.8387865656143 383.696471919297 461.03710406264923 1984.8252482263338 1587.6963527806877 239.15085872433306 9.552760819626732 8.554009972141825 1.5428297725907612 1.0293982088164075 8.420131503376847 7.517592853964895 1.6044118510215357 1.9278086916429698 8.29946945962767 6.638890452870212 1.0 7.901777161425569 -11.075303121741152 1.3878025826924487 0.9952367251079822 5.563344888000505 0.0 3.559338579764848 0.5694963341672069 1.9547554808558507 2.4144855245002987 0.5296794140483304 8.408080833574643e-12 11.075303121741152 4.568108162892523 KSDASDMNSDT(ph)SPSCR ddPTM_A549_MK2206_60min_R1 1 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.001)DT(0.501)S(0.496)PS(0.002)CR 102.37 7.0518e-07 10338000.0 1094.7 936.2 852.09 719.52 935.5 824.95 939.89 1041.2 1326.1 1294.2 1503.2 True False 1279.4585971546062 983.848581166489 972.9291747813052 895.8024323004797 797.8891892493564 912.2456614425091 1110.6558468667808 1188.7932885412692 1025.7404673465528 1001.8393211390633 1129.9139537905464 1.1323504704604976 0.8707287646691602 0.8610648372979189 0.7928058851696735 0.7061503989508763 0.8073585235248925 0.9829561296599976 1.0521095739664061 0.9078040534905153 0.8866509859252304 1.0 10.141997196093438 -7.769982481832328 24.992858010567787 0.9658586347822868 0.8519148405191213 0.18916315748276324 0.10632267207284013 225.74495458339405 660416.4761127903 0.016684087806421322 0.023249575554759237 1.698312156019388e-08 7.769982481832328 -0.11394379426316559 KSDASDMNSDT(ph)SPSCR ddPTM_A549_PD325901_60min_R1 1 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.002)DT(0.499)S(0.499)PSCR 100.59 3.9921999999999994e-07 27209000.0 1813.6 2069.9 1873.0 1668.7 1857.6 1650.5 1663.5 1912.2 958.84 1968.7 1728.7 True False 1997.7153368982438 2244.3377373146827 2000.1130432639666 1771.7718091073314 1727.1285843721037 1637.058875221531 1726.8054028021272 1874.05967090812 918.543289255919 1844.3959460195563 1516.0808591321827 1.3176838984971768 1.480354905739896 1.3192654146486935 1.1686525810513222 1.1392061142178962 1.079796546048736 1.1389929451326 1.2361211868216893 0.6058669520975951 1.2165551295696087 1.0 10.566130985373002 -7.553354031063626 0.6564576271617968 0.8304712612998038 1.3687272014450007 0.20203419793669686 0.19075322576778736 0.42257029456172435 0.3629632169122758 0.041976587639765826 0.09571286192037767 2.7967005571800774e-08 7.553354031063626 0.538255940145197 KSDASDMNSDTS(ph)PSCR ddPTM_A549_MK2206_60min_R1 1 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.002)DT(0.119)S(0.877)PS(0.002)CR 102.37 4.776399999999999e-07 9298200.0 642.81 849.54 736.29 638.39 1062.0 707.34 732.32 780.91 1560.5 1430.9 1053.4 True False 751.3006128043777 892.7779573212761 840.7069935097544 794.7955786584164 905.7812068228926 782.1902493057088 865.3730646963796 891.6063839365755 1207.0492416064374 1107.6586961967898 791.811707639011 0.948837464205439 1.1275129537845832 1.0617511529559687 1.0037684098259958 1.1439351023537032 0.987848805163552 1.092902588263958 1.1260333426934641 1.524414491426962 1.3988915363471415 1.0 9.62901358882734 -8.533738967287443 24.954715959747997 1.2517235300000888 1.0586936084232346 0.3978304395096429 0.13234578386344778 272.69515110112616 626598.9865825126 0.031844714982367434 0.03612421595050461 2.9259104680228643e-09 8.533738967287443 -0.19302992157685428 KSDASDMNSDTS(ph)PSCR ddPTM_A549_PD325901_60min_R1 2 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.013)DT(0.101)S(0.873)PS(0.013)CR;KSDASDMNS(0.001)DT(0.18)S(0.818)PS(0.001)CR 110.75 1.1774000000000001e-07 47637000.0 3455.1 3610.4 3452.8 3020.0 3499.7 2928.9 2862.7 4048.0 1833.17 3045.6 3738.1 True False 3805.859208489814 3914.661078699903 3687.127771373106 3206.5385410823674 3253.8931453095647 2905.048009473699 2971.6416150295477 3967.2594644054334 1756.1282399203958 2853.300296234653 3278.337397768271 1.1609113848625385 1.1940995095150395 1.124694417933651 0.9780990032524473 0.9925437044779629 0.8861345422991884 0.9064477674117659 1.2101437353904287 0.5356764807416956 0.8703497993150547 1.0 11.678748625078136 -6.762206708456697 0.6147477301304357 0.8092431833980502 1.214303179730454 0.2820821883342537 0.15667861493136317 0.9445400551425446 0.5820811148967918 0.03967361269557684 0.19352290093916907 1.7289932251350202e-07 6.762206708456697 0.40505999633240375 KSDGACDS(ph)PS(ph)SDKENSSQIAQDHQK ddPTM_A549_MK2206_60min_R1 1 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 2 KS(0.014)DGACDS(0.974)PS(0.474)S(0.443)DKENS(0.049)S(0.046)QIAQDHQK 59.573 0.0002164 5443600.0 757.63 918.32 794.92 712.96 1060.8 752.88 720.84 1005.1 1446.6 1077.5 1026.9 True False 885.4994217248973 965.0585655381434 907.6516091224576 887.6352320059901 904.7577252332632 832.5492618787033 851.8072972959069 1147.5760029896558 1118.9474097455113 834.0920016437499 771.8923890018041 1.1471798845821082 1.2502501375692252 1.1758784282044996 1.14994686390659 1.1721293513507471 1.0785820326008648 1.1035311520527455 1.4867046486540414 1.4496158087431228 1.080580678768424 1.0 9.592255922404377 KSDGACDS(ph)PS(ph)SDKENSSQIAQDHQK ddPTM_A549_PD325901_60min_R1 2 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 2 KS(0.008)DGACDS(0.992)PS(0.52)S(0.473)DKENS(0.004)S(0.004)QIAQDHQK;KS(0.002)DGACDS(0.996)PS(0.528)S(0.47)DKENS(0.002)S(0.002)QIAQDHQK 97.399 2.2176e-09 35417000.0 2086.83 1873.42 2801.2 2344.32 2099.18 2453.5 2275.7 2685.2 2041.68 2575.4 2866.6000000000004 True False 2298.6834453569504 2031.299678168063 2991.306276983996 2489.1233220629833 1951.7408385778604 2433.5195094553324 2362.303008810821 2631.6415795013518 1955.8752897334525 2412.7888044794854 2514.026372874595 0.914343409503928 0.8079866226086677 1.1898468167474585 0.9900943557791174 0.7763406381239333 0.9679769216870986 0.9396492551944514 1.0467836009581208 0.7779851917372929 0.9597309043821397 1.0 11.295784068794344 KSDGACDS(ph)PSS(ph)DKENSSQIAQDHQK ddPTM_A549_MK2206_60min_R1 1 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 2 KS(0.013)DGACDS(0.964)PS(0.122)S(0.756)DKENS(0.074)S(0.07)QIAQDHQK 68.104 5.1717e-05 5872700.0 750.78 863.67 629.6 795.08 1156.5 1183.3 844.81 890.99 1184.9 1628.6 1516.9 True False 877.4933091913178 907.6271139671669 718.8867472242476 989.8746356924976 986.3803820062866 1308.51602058903 998.3010416022347 1017.2905610424359 916.5220418964864 1260.698128888177 1140.2118656897821 0.7695879472894889 0.7960161977599568 0.6304852359954614 0.8681497408323 0.8650851755603914 1.147607791116461 0.875539951514452 0.8921943295398143 0.8038173163037797 1.1056700660850478 1.0 10.155086204824661 -6.460247391545495 5.190650337577224 0.9163330252309911 0.7379914870481761 0.4203503601208025 0.10871257746469704 0.17976064444956902 9.714230444004569 0.014773870582559112 0.03455417772717674 3.465393914892496e-07 6.460247391545495 -0.17834153818281506 KSDGACDS(ph)PSSDKENSSQIAQDHQK ddPTM_A549_MK2206_60min_R1 1 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KSDGACDS(0.482)PS(0.313)S(0.205)DKENSSQIAQDHQK 171.05 2.2682999999999996e-48 29588000.0 2350.0 2495.9 2158.4 2147.7 3151.3 2999.1 2618.8 2378.4 3477.7 3477.8 4348.0 True False 2746.6225480161934 2622.9306491491575 2464.493575617561 2673.886596413918 2687.747944501867 3316.4627713585396 3094.6020617037348 2715.545483544519 2690.006502745725 2692.1625645629997 3268.271601304746 0.8403899317669002 0.802543658887481 0.7540663311561058 0.8181347582454469 0.8223759443458969 1.0147451546054358 0.9468619622886667 0.8308812163776198 0.8230670002064184 0.8237266950177108 1.0 11.674312164588054 -7.034279640346065 19.74634266191563 0.9161508394537802 0.8026576040168865 0.364285438952351 0.0648051778119131 44.072243944815575 25387.387434314744 0.011402619383060595 0.01977129178539366 9.241029564169575e-08 7.034279640346065 -0.11349323543689371 KSDGACDSPS(ph)SDKENSSQIAQDHQK ddPTM_A549_MK2206_60min_R1 2 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KS(0.004)DGACDS(0.037)PS(0.479)S(0.479)DKENSSQIAQDHQK;KSDGACDS(0.058)PS(0.471)S(0.471)DKENSSQIAQDHQK 115.76 1.7686e-17 34838800.0 2350.28 2589.16 2518.97 2422.8 3087.9 2886.7 2327.3 3045.1 3931.3 4244.2 4265.4 True False 2746.9498051708497 2720.9371848034884 2876.1978234680173 3016.386108763625 2633.674000516394 3192.1686779636225 2750.140284940854 3476.752250227639 3040.8668269960795 3285.4322722750817 3206.183460948776 0.8567662576482664 0.8486529913039682 0.8970783670055147 0.940802716221053 0.8214358387766854 0.9956288268728682 0.8577613597092884 1.0843896778130082 0.948438186408779 1.0247174911515682 1.0 11.64664126493567 -7.599347539420195 1.1124932881145981 0.9813340512849752 0.875261724325751 0.441960114884662 0.06058396070101412 0.3514048349546789 0.8748971346235384 0.009585662359124624 0.017358409111400658 2.5156629901931395e-08 7.599347539420195 -0.1060723269592242 KSDGACDSPS(ph)SDKENSSQIAQDHQK ddPTM_A549_PD325901_60min_R1 3 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KS(0.001)DGACDS(0.063)PS(0.468)S(0.468)DKENS(0.001)S(0.001)QIAQDHQK;KSDGACDS(0.054)PS(0.472)S(0.472)DKENS(0.001)S(0.001)QIAQDHQK;KSDGACDS(0.042)PS(0.479)S(0.479)DKENSSQIAQDHQK 166.2 8.001799999999999e-42 122182000.0 6874.1 6702.1 7036.700000000001 5592.6 7579.799999999999 7487.5 7169.299999999999 7455.6 7102.5 8085.6 8413.7 True False 7571.953571555044 7266.909488021994 7514.252777114556 5938.042200283854 7047.420996890433 7426.524282472716 7442.131634691487 7306.892209194951 6804.006624609066 7575.073836102874 7378.868238838686 1.0261673371127638 0.9848271107176847 1.0183476020839175 0.8047361747197163 0.9550815611256372 1.0064584489235344 1.008573590665275 0.9902456545754688 0.922093524965816 1.0265902020355182 1.0 12.849183839236945 KSDGACDSPSS(ph)DKENSSQIAQDHQK ddPTM_A549_MK2206_60min_R1 1 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KSDGACDS(0.028)PS(0.177)S(0.782)DKENS(0.007)S(0.007)QIAQDHQK 82.62 4.7786e-07 5634800.0 882.1 1146.0 849.69 839.79 1255.8 1086.1 1018.8 965.39 1629.9 1606.8 1701.8 True False 1030.9769147255677 1204.3265050382365 970.1888186927747 1045.5385876996058 1071.0734835482008 1201.0303811051683 1203.902772439196 1102.2369888828803 1260.7302524154643 1243.822764028934 1279.196092709388 0.8059568979310417 0.9414713755788804 0.7584363525047019 0.8173403543510781 0.8373020287136936 0.9388946604436059 0.9411401264440092 0.8616638177406395 0.9855644960149836 0.9723472195685557 1.0 10.321021721903321 -8.082955507109533 0.609552846343946 0.9997675458991021 0.8295857656113301 0.5404600671654668 0.05347658241005593 0.34317018640545294 0.2660706923366559 0.013242399430964757 0.020890124460821745 8.261225803985369e-09 8.082955507109533 -0.17018178028777198 KSDIDEIVLVGGSTR ddPTM_A549_MK2206_60min_R1 2 KSDIDEIVLVGGSTR 15 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 82.24799999999999 0.00029651 8798200.0 1540.03 1641.81 1528.28 1811.5900000000001 2006.2200000000003 1829.08 1517.96 1479.9099999999999 3073.3999999999996 2507.5 2315.81 False True 1799.9494138814373 1725.3711162625013 1745.0130845741319 2255.429631325366 1711.1076956235631 2022.6320315549597 1793.7536832075011 1689.6917745342946 2377.2798072112932 1941.0540084656175 1740.730463895479 1.03401959764261 0.991176492885288 1.00246024342509 1.2956799907310588 0.9829825645691149 1.1619444098362188 1.0304603270935837 0.9706797287576803 1.3656794411992523 1.1150801624519433 1.0 10.765477116884098 KSDIDEIVLVGGSTR ddPTM_A549_PD325901_60min_R1 2 KSDIDEIVLVGGSTR 15 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 99.569 9.403600000000001e-06 14946200.0 4087.3 5322.9 4253.200000000001 5187.5 5257.9 6283.5 4769.4 5264.9 6763.299999999999 5497.9 5745.0 False True 4502.2396870887715 5771.4794637191735 4541.847728569308 5507.920093332708 4888.603242770283 6232.329259287787 4950.902126915821 5159.887439265849 6479.062021009294 5150.7616557225165 5038.401420555551 0.8935849511157726 1.145498141567845 0.9014461829181741 1.0931880240549365 0.9702687092032554 1.2369656045787216 0.9826335207665764 1.0241120166040487 1.2859360499892227 1.022300770777922 1.0 12.29875035400975 -7.023560528779481 1.0579839483620477 1.124049143070353 0.9960865671341793 0.05375211216005993 0.11840243670044727 0.8016827851088528 1.7565395251949565 0.021850668087423468 0.056698843256252136 9.471951621899695e-08 7.023560528779481 -0.12796257593617366 KSDITSELSTTIIQGS(ph)PAALEER ddPTM_A549_PD325901_60min_R1 1 KSDITSELSTTIIQGSPAALEER 23 1 Q8TEP8;H0Y966;K7ELX0;A0A0A0MR42;K7ENP4;Q8TEP8-1;Q8TEP8-2 Q8TEP8 CEP192 Centrosomal protein of 192 kDa 1 KSDITSELSTTIIQGS(1)PAALEER 83.165 1.4785999999999999e-05 1553800.0 1843.2 1495.2 1767.9 1799.5 2035.2 1960.8 1635.5 1986.1 1756.3 1982.4 1937.9 True False 2030.3203071078772 1621.2057514048554 1887.8803252463265 1910.651028038979 1892.254573058842 1944.8318949011682 1697.7398474799402 1946.4856774346918 1682.48881869777 1857.230925681499 1699.5505853602447 1.1946218750985402 0.9539026171799512 1.1108114942316722 1.1242095672215537 1.1133852615853448 1.1443212762560595 0.9989345784139042 1.145294346753501 0.9899610127468739 1.0927776682138777 1.0 10.730937587502119 -8.779427778486921 24.92666738488741 0.9952593516088626 1.093400260544358 0.12059484776607465 0.07079243616910598 181.4966677022573 251500.40438641384 0.01021417340686054 0.010884613886603806 1.661775001624025e-09 8.779427778486921 0.09814090893549543 KSDKNPNS(ph)PRR ddPTM_A549_PD325901_60min_R1 2 KSDKNPNSPRR 11 3 K7EKG9;Q14CW9 K7EKG9 ATXN7L3 Ataxin-7-like protein 3 1 KSDKNPNS(1)PRR;KS(0.007)DKNPNS(0.993)PRR 59.306000000000004 0.0028648000000000002 15358600.0 2408.3 2584.7 1856.1399999999999 1981.0100000000002 1794.98 1778.27 1442.95 1600.29 1815.4 2643.9 3706.0 True False 2652.788843103243 2802.521740005439 1982.1088222765509 2103.37248849986 1668.9067971448303 1763.7883587035406 1497.862251862537 1568.370960546781 1739.1050512235552 2476.9637027892036 3250.185494269606 0.8161961364298649 0.8622651676178354 0.6098448306323445 0.6471545984708599 0.5134804767565654 0.5426731372142518 0.46085438954281666 0.4825481386560773 0.5350787068275847 0.762099180848703 1.0 11.66630634250354 -10.729090210756764 0.9921580191552996 0.9990971919053897 0.6022804268235492 0.3196706448312643 0.13978438887600145 0.33695970226121713 0.5914388643473679 0.09315169626583172 0.02427813445493163 1.865992050544343e-11 10.729090210756764 -0.3968167650818405 KSDVEAIFSK ddPTM_A549_MK2206_60min_R1 2 KSDVEAIFSK 10 1 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;G3V555;A0A0G2JNQ3;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;G3V2H6;P07910-2;P07910;B2R5W2;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 88.441 0.00071092 8178900.0 3004.7 3137.8999999999996 2577.8 2879.5 3879.0 2667.88 2807.9 2476.8 4013.7999999999997 3652.1 3503.8999999999996 False True 3511.8199021379783 3297.605706945443 2943.3708020880977 3584.9776292656675 3308.4042384802297 2950.1932908045815 3318.0590839536876 2827.893984881881 3104.6807087215075 2827.088073506391 2633.7849272796007 1.3333738323748734 1.252040617588124 1.1175440984576763 1.3611504842836732 1.2561406226503975 1.1201344727307687 1.259806391017988 1.0736996614992298 1.1787905217941574 1.073393671679354 1.0 11.362921825770718 -14.999999999983821 0.10178983041467232 0.26707406885973395 1.3701924421713203 0.5206922755115372 0.07699545664753725 52.02813975673175 0.37990975943970345 8.03456839756504 0.4675987715493681 1.0000000000372536e-15 14.999999999983821 1.1031183733115864 KSDVEAIFSK ddPTM_A549_PD325901_60min_R1 2 KSDVEAIFSK 10 1 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;G3V555;A0A0G2JNQ3;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;G3V2H6;P07910-2;P07910;B2R5W2;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 114.82 9.387200000000001e-05 17829700.0 6390.700000000001 6520.6 7426.900000000001 7033.9 7859.700000000001 7642.6 7351.200000000001 7194.8 8224.9 7097.799999999999 7435.5 False True 7039.479159415316 7070.113846047687 7930.934095577775 7468.368027854054 7307.66178649301 7580.361199495954 7630.953938730994 7051.2940697885915 7879.236055860214 6649.64369668187 6520.980637517987 1.0795123541563956 1.0842102191456147 1.2162180102096491 1.1452829632533092 1.1206384733683936 1.162457246979526 1.170215702654729 1.0813241844669013 1.2082900554139977 1.0197306304551235 1.0 12.670873220667758 -10.961700621697927 1.1905341258266937 0.9989188094355127 1.1471043673520356 0.5448648174379922 0.045843310409119195 0.2814985768738614 0.7007920367750328 0.03451370260969178 0.007762765615582065 1.0921929736961698e-11 10.961700621697927 0.14818555791652288 KSEAPAEVTHFS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KSEAPAEVTHFSPK 14 1 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 KSEAPAEVT(0.008)HFS(0.992)PK;KSEAPAEVT(0.041)HFS(0.959)PK 112.74 1.4263e-06 97045000.0 4386.2 5150.9 4780.1 4477.0 6273.700000000001 4961.200000000001 4739.0 4964.3 7386.3 7319.299999999999 7474.8 True False 5126.483327705797 5413.05880872727 5457.9900578250135 5573.865200980165 5350.847040720139 5486.1908910219745 5600.014957390406 5668.004727531134 5713.314843497353 5665.865046525378 5618.600866014886 0.9124127963447715 0.9634175727749458 0.9714144478278648 0.9920379350479738 0.9523451066057559 0.976433639236804 0.9966920752928189 1.0087929117398384 1.0168572176136164 1.0084120907744805 1.0 12.45599520248096 -2.000000000001703 0.2944891034994078 1.0091138891398022 0.2903036421555025 0.7497357394539361 0.014686370497700945 17.981617894730782 0.2246692903646547 0.005567111752927604 6.881753845293357 0.009999999999960785 2.000000000001703 -0.7188102469842996 KSEAPAEVTHFS(ph)PK ddPTM_A549_PD325901_60min_R1 4 KSEAPAEVTHFSPK 14 1 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 KSEAPAEVT(0.214)HFS(0.786)PK;KSEAPAEVT(0.372)HFS(0.628)PK;KSEAPAEVT(0.003)HFS(0.997)PK;KSEAPAEVT(0.003)HFS(0.997)PK 115.57 8.6471e-07 158824000.0 14630.0 13501.1 14034.800000000001 14810.699999999999 16480.4 15673.6 15851.0 16153.5 15234.399999999998 14936.6 17567.7 True False 16115.22682996323 14638.885079114578 14987.285926108463 15725.523301459803 15322.873558293508 15545.959398165514 16454.21847900002 15831.305770324407 14594.151147053075 13993.500526903894 15406.984270825722 1.0459689285513596 0.9501460390814056 0.9727592150845517 1.020674976039098 0.9945407413252518 1.0090202680094218 1.067971394645824 1.0275408536829735 0.9472425550980923 0.9082569489865473 1.0 13.911296879085313 -8.751360789574234 24.98670143249249 0.9750867610309474 1.009365995064483 0.2711441305643859 0.03833079701988882 282.50637441327177 700384.7198448248 0.006156334154839875 0.006941591396164041 1.7727161873467105e-09 8.751360789574234 0.03427923403353572 KSEAPS(ph)GESR ddPTM_A549_MK2206_60min_R1 1 KSEAPSGESR 10 1 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KS(0.001)EAPS(0.995)GES(0.004)R 50.563 0.011261 3811100.0 1195.3 927.78 1100.9 835.62 787.58 506.0 567.84 560.64 900.39 1681.7 1427.7 True False 1397.0374177207473 975.0000391312163 1257.0241741092354 1040.3469375124073 671.7280253009172 559.544584144384 671.0091777599852 640.1124368879914 696.4531026273754 1301.8028020086256 1073.162687484542 1.3017946244435288 0.9085295738492216 1.171326760396095 0.9694214583167686 0.6259330790519988 0.5213977253122153 0.625263238822446 0.5964728781135635 0.6489725283496751 1.2130526127963026 1.0 10.067653084555031 -6.55887126924568 5.3786414551788875 0.7605995968598208 1.1012124910661463 0.39352497759579463 0.208415569247307 0.1502995571094814 11.093421273978045 0.02877893372203899 0.06179238080407373 2.761396250094155e-07 6.55887126924568 0.34061289420632546 KSEATPSPGACLQPEVPLS(ph)PAEQATTVK ddPTM_A549_MK2206_60min_R1 2 KSEATPSPGACLQPEVPLSPAEQATTVK 28 1 Q2NL68;A0A2R8Y8D9 Q2NL68 PROSER3 Proline and serine-rich protein 3 1 KSEATPSPGACLQPEVPLS(0.999)PAEQATTVK;KSEATPSPGACLQPEVPLS(1)PAEQATTVK 116.36 1.081e-20 7427500.0 828.25 969.27 499.0 1094.52 1022.8700000000001 839.29 809.88 808.34 1092.75 1093.58 1362.1599999999999 True False 968.0383512316643 1018.601702913099 569.7657034067656 1362.6774491348706 872.4071779876961 928.1031107243876 957.0247127434786 922.9246704374275 845.2438697631743 846.5395184757042 1023.8980782965207 0.9454440551760861 0.9948272435551072 0.5564672065355333 1.3308721620046242 0.8520449412690929 0.9064409147719966 0.9346874782065218 0.9013833407841876 0.8255156325416911 0.8267810404372559 1.0 9.99985639721249 KSEDGT(ph)PAEDGTPAATGGSQPPSMGR ddPTM_A549_PD325901_60min_R1 1 KSEDGTPAEDGTPAATGGSQPPSMGR 26 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KS(0.267)EDGT(0.733)PAEDGTPAATGGSQPPSMGR 56.251999999999995 0.0011585999999999999 5549000.0 573.79 827.25 517.02 1014.2 804.28 754.0 777.87 750.45 711.47 659.76 717.32 True False 632.0407383981271 896.9652607341272 552.108086293826 1076.844830584681 747.7901474153718 747.8596739879029 807.472268516797 735.4816860333636 681.5693901035714 618.1026410046541 629.0941874661286 1.0046837993271989 1.4258044003663939 0.8776238873190231 1.711738642701511 1.1886775657987367 1.1887880843409777 1.2835474951201526 1.1691121944644627 1.0834139047585274 0.9825279796245673 1.0 9.297132222169568 -8.79406722865507 1.171167838509663 1.0258094922625545 1.2508546705323904 0.18020604022361741 0.20368430665815584 0.493600417589294 1.3439632791682867 0.03933703192149381 0.0411200437555501 1.6066925182431526e-09 8.79406722865507 0.22504517826983594 KSEDGTPAEDGT(ph)PAATGGSQPPSMGR ddPTM_A549_PD325901_60min_R1 2 KSEDGTPAEDGTPAATGGSQPPSMGR 26 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 KS(0.001)EDGT(0.019)PAEDGT(0.981)PAATGGSQPPSMGR;KS(0.004)EDGT(0.006)PAEDGT(0.991)PAATGGSQPPSMGR 114.14 1.9469e-17 20111200.0 2651.3 2276.0 2526.8 2566.6000000000004 3421.4 2700.5 2778.8999999999996 2684.0 2973.2 2757.9 3003.0 True False 2920.4580242160996 2467.8065076226944 2698.2838428827504 2725.1330528284775 3181.092667189231 2678.508023347922 2884.652560172426 2630.465514442732 2848.2467435815106 2583.765723333841 2633.650037585434 1.1089013280191224 0.9370290176766284 1.0245415314771942 1.0347362079006202 1.207864606835045 1.0170326296669296 1.0953059514380714 0.9987908328376 1.0814826202925663 0.9810588675261777 1.0 11.362847936033424 -6.306444376818746 4.787494860454158 1.0510001653666603 1.014590327286608 0.029415794902357573 0.07008989521137297 0.5273936508333098 28.21487919833744 0.00938420004966949 0.022962035685742354 4.938051593364411e-07 6.306444376818746 -0.03640983808005238 KSEDS(ph)LLRNSDEEESASESELWK ddPTM_A549_MK2206_60min_R1 1 KSEDSLLRNSDEEESASESELWK 23 2 Q70Z53 Q70Z53 FRA10AC1 Protein FRA10AC1 1 KS(0.135)EDS(0.408)LLRNS(0.408)DEEES(0.046)AS(0.002)ESELWK 44.6 0.0077395 6948800.0 2845.7 2909.3 2285.0 2323.8 3818.1 2897.8 2969.1 2817.3 4193.6 3995.5 4072.0 True False 3325.984589314755 3057.370943374991 2609.047359287494 2893.1311043193473 3256.462547806484 3204.4432725960387 3508.5470373470885 3216.660902619398 3243.7562958031103 3092.9137750047357 3060.810018517234 1.0866354230394153 0.9988764166604797 0.8524042144083841 0.9452174708056149 1.063921814194803 1.0469265499034095 1.1462805649880727 1.0509181828206586 1.0597705431500457 1.0104886472186385 1.0 11.57969778563644 -6.760712612873336 24.998367034871187 1.0431564708351018 0.9643343655554323 0.27730980645974745 0.06280594515146543 21.97177790791862 755708.1143540206 0.009490163968460355 0.018871567847463733 1.73495169331132e-07 6.760712612873336 -0.07882210527966949 KSEDSLLRNS(ph)DEEESASESELWK ddPTM_A549_PD325901_60min_R1 2 KSEDSLLRNSDEEESASESELWK 23 2 Q70Z53 Q70Z53 FRA10AC1 Protein FRA10AC1 1 KSEDS(0.007)LLRNS(0.993)DEEESASESELWK;KS(0.024)EDS(0.079)LLRNS(0.894)DEEES(0.002)ASESELWK 241.04 6.055699999999998e-99 83168000.0 7969.3 7712.6 6965.799999999999 7797.0 8710.2 8369.7 7433.200000000001 7736.1 9088.3 9073.7 10187.8 True False 8778.337469311411 8362.567869372057 7438.541076758221 8278.602981728209 8098.4256005587295 8301.539938165195 7716.074493603112 7581.797416646951 8706.350356414587 8500.785033472666 8934.765185785182 0.9824922409015695 0.935958326322502 0.8325390675731034 0.9265607779932596 0.9063949003878656 0.9291279362744284 0.8636012623900903 0.8485726551280002 0.9744352733820031 0.9514279174339177 1.0 13.125214099015059 -8.904954970891641 7.063853024562659 0.9888217327970885 0.9024159021036727 0.35823694647491866 0.04229827467129362 0.13938805909352497 8.90729397569692 0.007166505027834682 0.007599025797958147 1.2446436539096558e-09 8.904954970891641 -0.08640583069341579 KSEEEPTREELEFDMDS(ph)VINGEGPVGTADPAEK ddPTM_A549_PD325901_60min_R1 1 KSEEEPTREELEFDMDSVINGEGPVGTADPAEK 33 2 Q8TD43-2;Q8TD43 Q8TD43-2 TRPM4 Transient receptor potential cation channel subfamily M member 4 1 KSEEEPTREELEFDMDS(1)VINGEGPVGTADPAEK 105.93 7.1797e-15 4972600.0 559.95 619.75 723.62 766.19 952.93 817.31 668.68 940.38 858.12 743.88 768.07 True False 616.7957117865967 671.9785075128145 772.7292046805511 813.5158161562575 885.9994842300323 810.6540983382673 694.1269833157359 921.623383186161 822.0562005926839 696.9112898486449 673.6022591968853 0.9156675224367311 0.9975894503590195 1.147159461136386 1.2077094532405321 1.3153154879355387 1.2034610740539746 1.0304700939443427 1.3682011463040276 1.220388128704906 1.0346035517748267 1.0 9.395753166846903 -5.636847239656318 3.150637536162796 1.148780052989501 0.927628565869707 0.3483906203199605 0.11162652608914064 0.25728372456175347 4.817087940482503 0.017742769207980853 0.09118185210517513 2.307558715204794e-06 5.636847239656318 -0.22115148711979393 KSEPLDES(ph)DNDF ddPTM_A549_MK2206_60min_R1 3 KSEPLDESDNDF 12 1 J3KNW5;Q96AJ1-2;Q96AJ1 J3KNW5 CLUAP1 Clusterin-associated protein 1 1 KSEPLDES(1)DNDF;KSEPLDES(1)DNDF;KSEPLDES(1)DNDF 83.85600000000001 0.00042583 30194700.0 13402.900000000001 14887.2 14289.0 12576.300000000001 17782.5 14783.699999999999 13859.999999999998 13317.4 20870.8 20605.5 21410.4 True False 15664.981850555834 15644.894891627593 16315.395062082722 15657.494064571552 15166.71780633531 16348.101321374157 16378.182593254074 15205.182232827015 16143.59712381904 15950.703238858741 16093.606783020965 0.9733667574805334 0.9721186246536873 1.013781141918774 0.9729014928518374 0.9424063860151263 1.015813393590658 1.017682537797142 0.9447964299008937 1.0031062235751165 0.9911204774610879 1.0 13.97420006824911 -7.298954404551883 24.971873794265875 0.999026416791802 0.9768068746002918 0.14391534037020692 0.023837326733940418 755.0051316542791 502567.69764870155 0.003503953456512826 0.005601561807863214 5.023953319329356e-08 7.298954404551883 -0.022219542191510233 KSEPLDES(ph)DNDF ddPTM_A549_PD325901_60min_R1 2 KSEPLDESDNDF 12 1 J3KNW5;Q96AJ1-2;Q96AJ1 J3KNW5 CLUAP1 Clusterin-associated protein 1 1 KSEPLDES(1)DNDF;KSEPLDES(1)DNDF 108.58 9.014799999999999e-05 89194000.0 12851.0 13698.4 12739.4 13102.900000000001 13804.7 13830.8 13124.2 14394.6 13833.4 14940.9 15141.2 True False 14155.624059593812 14852.812242538976 13603.972292235447 13912.236374155009 12835.105495629618 13718.166550387119 13623.648612837806 14107.488410654749 13252.03030494433 13997.529024170059 13278.92838797489 1.0660215678557947 1.1185249147054186 1.0244781728437446 1.0476927028805751 0.9665769044475616 1.0330778320041243 1.0259599430609994 1.0623966029841825 0.9979743784856225 1.0541158604971406 1.0 13.696851105169955 -2.000000000002683 0.2865501730510926 0.9994609512272687 1.7696622911940698 0.172999298488536 0.03540903576540422 29.451229977328047 0.3671974990581521 0.0108853536125267 11.642482728772759 0.009999999999938218 2.000000000002683 0.7702013399668011 KSES(ph)EVEEAAAIIAQRPDNPR ddPTM_A549_PD325901_60min_R1 1 KSESEVEEAAAIIAQRPDNPR 21 2 Q16643;Q16643-3;Q16643-2;D6R9W4;D6R9Q9 Q16643 DBN1 Drebrin 1 KS(0.05)ES(0.95)EVEEAAAIIAQRPDNPR 80.132 3.3028e-05 4774600.0 1005.9 851.01 956.4 785.95 975.43 1067.0 1032.6 1016.6 673.91 1055.3 832.38 True False 1108.0182274955582 922.7275993198542 1021.3070553004056 834.4963464780412 906.919161850819 1058.3107057627226 1071.896158060401 996.3231154927281 645.5879062851529 988.6681779013753 730.0025368915638 1.5178279136037383 1.2640060173611674 1.3990458987296819 1.143141707467791 1.2423506988244 1.4497356547131102 1.4683457986662076 1.3648214425872938 0.8843639215750425 1.3543352631502352 1.0 9.511757667403707 -8.757415699798809 24.992268886188413 0.9453940630463288 1.350481741955395 0.2794902010876753 0.1624840787536204 36.67438237490407 227795.10517254655 0.01892973901075711 0.02108124555906154 1.7481725644424488e-09 8.757415699798809 0.40508767890906616 KSESPFRET(ph)EPLVS(ph)PHQDK ddPTM_A549_MK2206_60min_R1 1 KSESPFRETEPLVSPHQDK 19 2 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 2 KS(0.286)ES(0.286)PFRET(0.428)EPLVS(0.999)PHQDK 76.02 0.00021247 6638000.0 2315.0 2584.0 2096.4 1680.3 2570.9 2082.4 2146.9 1928.3 2760.3 2135.3 2924.4 True False 2705.715403684037 2715.5145628436303 2393.70104333055 2091.9735754315343 2192.7240156506364 2302.758185814754 2536.963940076276 2201.64243017108 2135.096457293334 1652.9342469697438 2198.1907706659613 1.230882887777896 1.2353407170483848 1.0889414491560971 0.9516797192255304 0.9975130661595542 1.0475697635274455 1.1541145445295815 1.001570227457589 0.9712971620959393 0.7519521367424233 1.0 11.10210088111788 -5.902023958432643 3.2135933955659803 1.002676241895109 1.2358771446736776 0.5170833307151854 0.09143525836631329 0.09385242189261617 1.9047105497235186 0.007820626915675769 0.02879137226932493 1.2530720456488254e-06 5.902023958432643 0.23320090277856864 KSFSKEELMS(ph)SDLEETAGSTSIPK ddPTM_A549_MK2206_60min_R1 7 KSFSKEELMSSDLEETAGSTSIPK 24 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KSFSKEELMS(0.5)S(0.5)DLEETAGSTSIPK;KS(0.074)FS(0.074)KEELMS(0.487)S(0.366)DLEETAGSTSIPK;KSFSKEELMS(0.5)S(0.5)DLEETAGSTSIPK;KS(0.002)FS(0.002)KEELMS(0.451)S(0.451)DLEET(0.079)AGS(0.013)T(0.002)SIPK;KS(0.004)FS(0.007)KEELMS(0.495)S(0.495)DLEETAGSTSIPK;KS(0.001)FS(0.001)KEELMS(0.573)S(0.424)DLEETAGSTSIPK;KS(0.001)FS(0.001)KEELMS(0.495)S(0.495)DLEET(0.009)AGSTSIPK 157.52 6.864599999999999e-34 149678700.0 13400.26 15144.29 16048.980000000001 13827.34 19237.82 14642.25 14452.69 13389.520000000002 22726.25 21296.91 19434.76 True False 15661.896283097645 15915.069674507422 18324.966690703634 17215.03892073288 16407.96216218605 16191.683176261071 17078.556694350453 15287.525463685255 17578.790661363855 16485.92323965364 14608.572719911097 1.072103112561496 1.0894335798332717 1.2543981566198585 1.1784203187262257 1.123173528090286 1.108368591970127 1.16907770675453 1.0464763229640335 1.2033202009806496 1.1285101943726346 1.0 13.834527611045205 -10.9623013971266 1.1606998337613739 0.9979926453512584 1.1444669620377321 0.035936038283137406 0.06868003991408457 0.37235193670448774 0.8713226906402883 0.044724786215521756 0.009788025792806961 1.0906831477794988e-11 10.9623013971266 0.1464743166864737 KSFSKEELMS(ph)SDLEETAGSTSIPK ddPTM_A549_PD325901_60min_R1 3 KSFSKEELMSSDLEETAGSTSIPK 24 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KSFSKEELMS(0.5)S(0.5)DLEETAGSTSIPK;KS(0.001)FS(0.001)KEELMS(0.499)S(0.499)DLEETAGSTSIPK;KSFSKEELMS(0.5)S(0.5)DLEETAGSTSIPK 171.15 2.1196e-41 38701300.0 6991.0 7559.21 8018.7 8448.7 9521.5 8910.9 8805.3 8175.2 8771.3 9356.3 9892.900000000001 True False 7700.721173497812 8196.251155749802 8562.897202360264 8970.557010610126 8852.742687391785 8838.332584799477 9140.39050994504 8012.139222679669 8402.672764017396 8765.541621243858 8676.136016260058 0.8875749710546021 0.9446891035812605 0.9869482435859037 1.0339345756911014 1.0203554521045712 1.018694562675763 1.0535093609430417 0.923468604879409 0.9684809860368532 1.0103047721723408 1.0 13.082836955058823 -5.469372154407637 2.284689564997857 0.9933046486582063 0.882358523330802 0.5087230861759573 0.03374906060051388 0.27977532711405917 2.2725408490109156 0.004953383936031303 0.051523137875963444 3.3933436651473e-06 5.469372154407637 -0.11094612532740433 KSFSKEELMSS(ph)DLEETAGSTSIPK ddPTM_A549_MK2206_60min_R1 3 KSFSKEELMSSDLEETAGSTSIPK 24 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KS(0.029)FS(0.029)KEELMS(0.149)S(0.793)DLEETAGSTSIPK;KSFSKEELMS(0.153)S(0.847)DLEETAGSTSIPK;KSFSKEELMS(0.144)S(0.856)DLEETAGSTSIPK 167.03 1.5207e-35 66044500.0 4917.7 6318.5 6118.700000000001 6039.8 7181.0 5995.7 5865.4 5687.0 8786.8 8237.2 8152.7 True False 5747.687533778397 6640.084661504441 6986.4236662023595 7519.551271136922 6124.684412613177 6630.160994376448 6931.067257032642 6493.149665707065 6796.60382963629 6376.410799016142 6128.159586926685 0.9379141408197077 1.0835365116257507 1.1400525014241838 1.2270488658909142 0.9994329171320993 1.081917156420125 1.131019380079268 1.0595594931240073 1.109077486189428 1.040509913060857 1.0 12.581238152465076 -10.821305839367284 0.9089422999226595 0.9961690572123408 1.0904510985549634 0.09695805153982817 0.07209110516240587 0.9010092475607022 1.230599271361259 0.05930770786394592 0.01246593571784043 1.5090170981114925e-11 10.821305839367284 0.09428204134262252 KSFSKEELMSS(ph)DLEETAGSTSIPK ddPTM_A549_PD325901_60min_R1 9 KSFSKEELMSSDLEETAGSTSIPK 24 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KSFSKEELMS(0.216)S(0.784)DLEETAGSTSIPK;KSFSKEELMS(0.165)S(0.835)DLEETAGSTSIPK;KS(0.027)FS(0.027)KEELMS(0.147)S(0.799)DLEETAGSTSIPK;KSFSKEELMS(0.148)S(0.852)DLEETAGSTSIPK;KS(0.006)FS(0.027)KEELMS(0.124)S(0.843)DLEETAGSTSIPK;KSFSKEELMS(0.153)S(0.847)DLEETAGSTSIPK;KSFSKEELMS(0.113)S(0.887)DLEETAGSTSIPK;KSFSKEELMS(0.144)S(0.856)DLEETAGSTSIPK;KSFSKEELMS(0.147)S(0.853)DLEETAGSTSIPK 233.33 1.9359e-89 466408300.0 43175.3 40902.49999999999 44793.8 43981.2 48768.0 46014.700000000004 47993.200000000004 49826.40000000001 47149.700000000004 49533.600000000006 49125.399999999994 True False 47558.42467202405 44349.497222336235 47833.776635001355 46697.81883544759 45342.70392046657 45639.97153932518 49819.60748888673 48832.57336394535 45168.16207649848 46406.04004254294 43083.287231568305 1.1038717732099301 1.0293898184686368 1.1102629281256942 1.083896374583758 1.0524429966718678 1.059342832732678 1.156355763224644 1.1334458557322984 1.0483917309680708 1.0771239388748397 1.0 15.394840710484337 -9.307279979425147 1.677690904694396 1.0145725616959715 1.0884621494725186 0.15319288075748938 0.04047775411926342 0.22680171268953397 1.3160120405774225 0.008222670332876696 0.007207882436275191 4.928559688788324e-10 9.307279979425147 0.07388958777654708 KSFSKEELMSSDLEETAGSTSIPK ddPTM_A549_MK2206_60min_R1 1 KSFSKEELMSSDLEETAGSTSIPK 24 2 O00567 O00567 NOP56 Nucleolar protein 56 0 60.278 0.00015865 2811900.0 1480.3 1950.1 1666.2 1396.8 2569.5 1634.2 1501.7 1422.0 2489.8 2227.0 2616.9 False True 1730.1384501397322 2049.351760449444 1902.4922144616305 1739.0160627047344 2191.5299537960686 1807.1299593058347 1774.5394516803503 1623.5728546923597 1925.8642753935962 1723.9191532813272 1967.0515072342218 0.8795593017146756 1.0418393991781847 0.9671796633005482 0.8840724588599527 1.1141192519546554 0.9186998676240841 0.9021316651618576 0.8253840068352805 0.9790614370344898 0.8763975660735231 1.0 10.941819019735815 -8.98125956913697 24.93815411418747 0.9907624679605517 0.9447326583326308 0.0 0.0833688112990095 250.5697132694598 333441.41795566364 0.013269087922521655 0.013481294569205594 1.0440959973746986e-09 8.98125956913697 -0.046029809627920915 KSFT(ph)PDHVVYAR ddPTM_A549_MK2206_60min_R1 3 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KS(0.006)FT(0.994)PDHVVYAR;KS(0.045)FT(0.944)PDHVVY(0.011)AR;KS(0.027)FT(0.973)PDHVVYAR 143.05 3.6865e-12 33264000.0 5790.0 6034.3 5752.800000000001 5065.700000000001 7903.2 6068.0 5065.1 5917.099999999999 9955.8 8705.8 10516.8 True False 6767.21044809096 6341.420095420794 6568.633544205296 6306.796727407917 6740.649749305737 6710.11173238759 5985.363106283642 6755.867045358755 7700.827196145696 6739.153733559311 7905.188311085963 0.8560467103106018 0.8021845711793868 0.8309268907602961 0.7978047428121964 0.852686803153428 0.8488237684328862 0.7571436467730915 0.8546117789356846 0.9741484823766086 0.8524975583577883 1.0 12.948584114384762 -8.73005635744351 3.5348908361696454 0.989007635185689 0.8208994109583202 0.47622968550675804 0.04949322287666249 0.04943407459090445 1.2738674090794386 0.00467637049446727 0.005158659225752395 1.861845513372206e-09 8.73005635744351 -0.16810822422736882 KSFT(ph)PDHVVYAR ddPTM_A549_PD325901_60min_R1 4 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KS(0.003)FT(0.997)PDHVVYAR;KS(0.018)FT(0.979)PDHVVY(0.003)AR;KS(0.014)FT(0.986)PDHVVYAR;KS(0.075)FT(0.925)PDHVVYAR 139.58 2.6679000000000003e-09 71722000.0 9871.1 11086.3 9957.5 11500.8 12241.3 13260.2 11116.899999999998 11713.7 12725.699999999999 11325.5 13312.9 True False 10873.206805280246 12020.581408373228 10633.27582931178 12211.178295788108 11381.513318192418 13152.213327605305 11539.959712901094 11480.061064280118 12190.883083813816 10610.405997178079 11675.497697426288 0.931284223342111 1.0295562313393294 0.9107342663136105 1.0458807506321468 0.9748203985086926 1.1264798870633617 0.9883912456635513 0.983260959129027 1.0441424768128846 0.908775477684091 1.0 13.511196429296355 -6.281386106163252 24.896257482951142 1.0218574427626086 0.9644280284095217 0.10219832288077169 0.05903023338258073 787.6276178607144 983066.5619910154 0.0062875456507356315 0.014630846755596756 5.231351405161077e-07 6.281386106163252 -0.057429414353086905 KSFTPDHVVY(ph)AR ddPTM_A549_MK2206_60min_R1 1 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KS(0.012)FT(0.024)PDHVVY(0.964)AR 96.604 0.00010056 9809900.0 3157.5 3360.3 2623.5 2639.0 3692.5 2561.3 2814.2 2795.3 5071.2 4453.0 5595.9 True False 3690.40880653665 3531.324916998239 2995.551749273848 3285.5551184692135 3149.338141425171 2832.335065946662 3325.5037124051687 3191.5423352472235 3922.581297042336 3447.0642072571873 4206.283591016843 0.8773561569690826 0.8395356234515237 0.7121611475914994 0.7811064202817934 0.7487222564239512 0.6733580855070121 0.790603781330219 0.7587558627913834 0.9325527421450145 0.8195035195959958 1.0 12.038330405668825 -8.856888991112271 2.991223877288195 0.9726200387916681 0.768768931745489 0.40084485969917105 0.07094420651258228 0.09591680596931242 1.644237264367344 0.01044038003855161 0.011016912399378043 1.3903079588157935e-09 8.856888991112271 -0.20385110704617915 KSGIPT(ph)SEPGSQ ddPTM_A549_PD325901_60min_R1 1 KSGIPTSEPGSQ 12 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KS(0.412)GIPT(0.574)S(0.014)EPGSQ 158.25 2.2651999999999998e-13 6345700.0 2543.6 3072.5 2825.8 2873.0 3388.1 3808.4 2775.8 3319.1 3731.9 3226.0 3514.7 True False 2801.8243995006474 3331.4303579396865 3017.575780915816 3050.4586849435896 3150.131544310466 3777.385653070997 2881.434587976044 3252.8979467164227 3575.0612210318327 3022.3098094473958 3082.4141815189923 0.9089707724222602 1.080786085761512 0.9789650589489487 0.9896329647173971 1.0219689369447758 1.225463364306716 0.9347979921880885 1.0553085196076464 1.1598250625975473 0.9805008773863162 1.0 11.589845013314381 -7.012981272501676 24.875011852503953 1.075221989995432 0.9966510886466617 0.1119215831569298 0.08506928628921663 861.7515239340167 1651312.5790390354 0.012589783089299655 0.022506837869076403 9.70551818147172e-08 7.012981272501676 -0.07857090134877032 KSGIPTSEPGS(ph)Q ddPTM_A549_MK2206_60min_R1 2 KSGIPTSEPGSQ 12 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KSGIPTSEPGS(1)Q;KSGIPTSEPGS(1)Q 99.01100000000001 0.00020061 5784400.0 1802.55 1982.21 2006.75 1790.28 3249.8 1792.85 1620.75 1563.56 2997.2 2710.4 3158.0 True False 2106.776371883654 2083.0960222965446 2291.3373252736014 2228.898680368723 2771.75872498403 1982.568197002488 1915.2192956721904 1785.1994182016767 2318.338985544897 2098.118757545448 2373.7814436339454 0.8875191006036588 0.8775433087502782 0.9652688672828561 0.9389654158541968 1.1676554016450789 0.8351940749723944 0.8068220858362777 0.7520487713766827 0.9766438236183305 0.8838719180201803 1.0 11.212971395420983 -8.970830902285082 24.99959787888329 0.9896959208898327 0.9066622801219929 0.012357591279069768 0.10621419584908694 305.27583834083424 261641.1432976125 0.01850161024063242 0.01943710983886019 1.0694712094840284e-09 8.970830902285082 -0.08303364076783981 KSGIPTSEPGS(ph)Q ddPTM_A549_PD325901_60min_R1 1 KSGIPTSEPGSQ 12 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 KSGIPTSEPGS(1)Q 113.25 2.9778000000000002e-05 8043700.0 2304.9 2512.8 2432.1 2542.8 2496.5 2554.7 2128.1 2606.7 2739.2 2818.5 2864.0 True False 2538.891751222301 2724.5624746723656 2597.156931405391 2699.8629808821997 2321.1544524574488 2533.895370208085 2209.0860100410036 2554.7073235834105 2624.0809498245926 2640.539428991782 2511.7461563918373 1.0108074594884455 1.0847284339378636 1.0340045409430416 1.0748948391984783 0.9241198385237398 1.0088182532935832 0.8795020963481398 1.0171041038849593 1.0447237843469526 1.051276388846936 1.0 11.294474953740531 KSGIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KSGISPK 7 1 Q86U86-8;Q86U86;E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;H0Y5B5;Q86U86-6 Q86U86-8 PBRM1 Protein polybromo-1 1 KS(0.007)GIS(0.993)PK;KS(0.004)GIS(0.996)PK 64.82 0.010661 110856100.0 12585.3 12051.5 11809.6 12424.3 14504.6 12000.5 11016.099999999999 12752.1 12489.9 13102.0 16178.4 True False 13862.950391191813 13067.122199742927 12611.070472893829 13191.720793367429 13485.84693415353 11902.771906753092 11435.323713741216 12497.74936167107 11964.992937797224 12274.737483998688 14188.559363327406 0.9770513014184385 0.920961872529285 0.8888196574409909 0.9297434965429637 0.9504733066141903 0.8388992569265139 0.8059538266652804 0.8808328627058147 0.8432845528153237 0.8651151374624195 1.0 13.792440492211131 -4.216059954510053 16.572006624859345 0.9113678377322095 0.9070600549432757 0.0 0.059320535813968504 0.0 0.0 0.009414212866235469 0.0 6.0805105381681264e-05 4.216059954510053 -0.004307782788933845 KSGLS(ph)VR ddPTM_A549_MK2206_60min_R1 2 KSGLSVR 7 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 KS(0.028)GLS(0.972)VR;KS(0.024)GLS(0.976)VR 56.431999999999995 0.015735 20548000.0 4754.4 4826.0 5178.6 4946.0 6347.3 4934.4 4959.5 5019.6 7741.700000000001 9560.3 8784.2 True False 5556.826486080078 5071.622786487368 5913.003350024605 6157.7702220343745 5413.620578217467 5456.55493281037 5860.576953192181 5731.143671880282 5988.217310954533 7400.621590083289 6602.840708413331 0.8415811817176775 0.768097097969532 0.8955241556093068 0.9325940900237304 0.8198926518580765 0.8263950583962497 0.8875841795978269 0.8679815135594088 0.9069153074258408 1.1208238873085983 1.0 12.688871126439738 -10.062568960456337 0.3021556753652678 1.0421527057028088 0.8331604866935488 0.6481755000140752 0.05472122978749861 1.1862905504086214 0.19739548160940026 0.08832603960849687 0.02478630265657587 8.6582683012339e-11 10.062568960456337 -0.20899221900926002 KSGLS(ph)VR ddPTM_A549_PD325901_60min_R1 2 KSGLSVR 7 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 KS(0.096)GLS(0.904)VR;KS(0.363)GLS(0.637)VR 50.04 0.022232 40136000.0 5933.3 5284.3 6189.4 6388.3 7011.6 6827.3 7897.8 7624.2 8313.0 8078.799999999999 8141.299999999999 True False 6535.644248135393 5729.626506252463 6609.449903885746 6782.890782118037 6519.129404706848 6771.700732384103 8198.355100841985 7472.129349930804 7963.6335192362085 7568.703189263363 7139.971711952813 0.9153599638489137 0.8024718776771435 0.9256969313787424 0.9499884671479865 0.9130469514036544 0.9484212270824268 1.1482335549197435 1.0465208618994857 1.1153592535814292 1.0600466632931924 1.0 12.801702643075252 -7.582135379502388 6.283268022179238 1.0614392399486783 0.9026819705644071 0.731394683786353 0.05007690332686688 0.0998514239823384 7.895149662318148 0.009068563175313299 0.013524510476316963 2.6173669880103354e-08 7.582135379502388 -0.15875726938427115 KSHHANS(ph)PTAGAAK ddPTM_A549_MK2206_60min_R1 2 KSHHANSPTAGAAK 14 1 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 KS(0.001)HHANS(0.882)PT(0.117)AGAAK;KS(0.004)HHANS(0.879)PT(0.117)AGAAK 67.275 0.00084291 12743300.0 527.11 757.76 426.9 133.928 723.49 665.98 436.09000000000003 355.32000000000005 706.17 639.61 689.09 True False 616.0732813977938 796.3267473453525 487.44083924719115 166.74036601225643 617.065579401408 736.4535615582544 515.3219081596083 405.687698121863 546.2236225217671 495.1216567715629 517.9699350835069 1.1893996922784151 1.5373995543138406 0.9410601006573984 0.3219112823321968 1.1913154366805572 1.4218075445624534 0.9948876821905276 0.7832263431591993 1.0545469640698453 0.9558887943790397 1.0 9.016724550689036 -5.773245003373228 24.991023986941165 0.9942936286425931 1.3633996376880624 0.24385169134657303 0.26743858892200967 210.8825961421292 446415.3964683432 0.03637975455682572 0.1144095137465082 1.6856018398112854e-06 5.773245003373228 0.3691060090454693 KSHHANS(ph)PTAGAAK ddPTM_A549_PD325901_60min_R1 2 KSHHANSPTAGAAK 14 1 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 KS(0.001)HHANS(0.974)PT(0.025)AGAAK;KS(0.001)HHANS(0.979)PT(0.02)AGAAK 84.14 5.7958e-05 18111000.0 711.6 606.44 740.4300000000001 804.37 872.84 677.95 779.9300000000001 418.84000000000003 642.02 695.8499999999999 717.21 True False 783.8411081477677 657.5468271013654 790.680032367293 854.0541080431859 811.534729534532 672.4289999736059 809.6106629440718 410.48590762637656 615.0381320846903 651.9139122454956 628.9977167687812 1.2461748067615113 1.0453882574951838 1.2570475397416205 1.3578016028906115 1.2902029815043847 1.0690483956411403 1.2871440410040211 0.6526031759464569 0.9778066210545207 1.036432875455315 1.0 9.296910969975736 -8.196619506063216 24.999998241655 0.9639564785994439 1.2183813249027644 0.5486910724793421 0.13055972146630812 131.78006971688853 50825.41099868432 0.020311841152591867 0.026222472564472445 6.358878016827584e-09 8.196619506063216 0.2544248463033205 KSHS(ph)PVK ddPTM_A549_MK2206_60min_R1 5 KSHSPVK 7 1 P78549-3;P78549-2;P78549;H3BUV2;H3BRL9;A0A494C106;H3BPD5 P78549-3 NTHL1 Endonuclease III-like protein 1 1 KS(0.079)HS(0.921)PVK;KS(0.173)HS(0.827)PVK;KS(0.307)HS(0.693)PVK;KS(0.032)HS(0.968)PVK;KS(0.036)HS(0.964)PVK 54.066 0.013628 57112600.0 5304.18 5698.43 4296.709999999999 3508.7200000000003 12471.870000000003 14308.140000000001 14168.36 16282.900000000001 12617.2 7729.040000000001 6342.320000000001 True False 6199.395909249586 5988.455747037552 4906.048087144059 4368.356557512429 10637.274444386283 15822.217877825356 16742.567613777588 18591.050939289882 9759.424345528185 5983.044495948596 4767.346904872846 1.3003869936364398 1.2561401271043597 1.0290939982004335 0.9163076748300828 2.2312776176438116 3.3188727805087987 3.5119255946456334 3.899663966196255 2.0471395390909755 1.2550050615853336 1.0 12.218970894279906 -6.761767520512223 24.999270983308154 2.028157594704241 1.127929970227661 0.26068258783564213 0.9129011113384745 15.10004007660504 1150539.1128699118 0.16540094657770882 0.32703700873969477 1.7307425843744563e-07 6.761767520512223 -0.9002276244765801 KSHS(ph)PVK ddPTM_A549_PD325901_60min_R1 4 KSHSPVK 7 1 P78549-3;P78549-2;P78549;H3BUV2;H3BRL9;A0A494C106;H3BPD5 P78549-3 NTHL1 Endonuclease III-like protein 1 1 KS(0.062)HS(0.938)PVK;KS(0.178)HS(0.822)PVK;KS(0.05)HS(0.95)PVK;KSHS(1)PVK 72.643 0.0043202 43332000.0 8014.32 7473.009999999999 5874.1 6580.74 7281.7 5081.590000000001 5019.75 5776.12 5522.02 7569.860000000001 8005.400000000001 True False 8827.927866569446 8102.786779230871 6272.75174983282 6987.2173638550885 6770.258512501266 5040.207215835799 5210.779333162599 5660.910755321516 5289.948702741819 7091.897747719607 7020.786550411734 1.2573986978783356 1.1541138191639913 0.893454273932449 0.9952186003212593 0.9643162434705017 0.7178977995763474 0.7421930998396487 0.8063072014330833 0.7534695243557276 1.0101286653279187 1.0 12.777416951774821 -5.410126659790289 0.92515388882594 0.8584784411409819 1.4398134395206035 0.608397176770282 0.10366221647029507 0.9763930603745639 0.7251111646011659 0.018199948833634485 0.5378815932285614 3.889316984882198e-06 5.410126659790289 0.5813349983796215 KSHT(ph)PER ddPTM_A549_MK2206_60min_R1 1 KSHTPER 7 1 O15344-2;O15344;Q9UJV3-2;Q9UJV3 O15344-2 MID1;MID2 E3 ubiquitin-protein ligase Midline-1;Probable E3 ubiquitin-protein ligase MID2 1 KS(0.013)HT(0.987)PER 54.608000000000004 0.025967 13443000.0 783.4 576.61 320.47 515.38 628.76 539.69 767.64 648.08 659.76 1135.0 797.59 True False 915.6187677088867 605.9569860995614 365.91746487127494 641.6481231362875 536.2702369133356 596.7996375827717 907.1102515068944 739.9473246617608 510.3254134202261 878.6027117082656 599.5263906358452 1.5272368022662028 1.0107261257621971 0.6103442160122267 1.0702583458515793 0.8944897927588784 0.9954518214783145 1.513044739439797 1.2342197711713543 0.851214260775052 1.4654946394877426 1.0 9.227679451006322 -8.777055650314603 24.98543758964929 0.9297400718895672 1.0887210169720276 0.0 0.29746592717445336 500.26850823413946 800407.4311433542 0.044860875732360965 0.04783696421210514 1.6708764951720465e-09 8.777055650314603 0.1589809450824604 KSHT(ph)PER ddPTM_A549_PD325901_60min_R1 1 KSHTPER 7 1 O15344-2;O15344;Q9UJV3-2;Q9UJV3 O15344-2 MID1;MID2 E3 ubiquitin-protein ligase Midline-1;Probable E3 ubiquitin-protein ligase MID2 1 KS(0.02)HT(0.98)PER 52.79 0.028696 12265000.0 1024.0 1052.8 743.78 680.91 932.25 902.05 482.89 579.21 699.25 1186.2 1271.6 True False 1127.9557261710424 1141.5231508019217 794.2573835124794 722.9682642411896 866.771976087905 894.7040038737244 501.266643197547 567.6572021685453 669.8629542073768 1111.3031295618416 1115.2012613365428 1.011436917511386 1.0236028153643162 0.7122099042109945 0.6482850130340858 0.777233676232664 0.8022803012269216 0.4494853624867592 0.5090177189077255 0.6006655277672136 0.9965045486318502 1.0 10.123088382726888 -5.758011742752575 24.803944851168975 0.744896953212685 1.0175199982746244 0.31068878524626553 0.16703524977430004 88.10681367667372 637545.8123026438 0.02720887257260739 0.09747650830843733 1.7457749488198733e-06 5.758011742752575 0.27262304506193935 KSIDKDEEFAGS(ph)SPQSSK ddPTM_A549_MK2206_60min_R1 1 KSIDKDEEFAGSSPQSSK 18 2 A0A590UJ38;H3BQ24;A0A590UJL5;Q9Y2M0-2;Q9Y2M0 A0A590UJ38 FAN1 Fanconi-associated nuclease 1 1 KSIDKDEEFAGS(0.5)S(0.5)PQSSK 81.14399999999999 5.0787e-05 2615900.0 814.42 939.71 1165.2 1086.0 1462.4 1171.0 1062.5 899.66 1213.6 1443.6 1208.7 True False 951.8741853427003 987.5372251740663 1330.4428809810888 1352.0700487523927 1247.2828972295654 1294.9144427531103 1255.5424967772333 1027.1895600931973 938.7215377209687 1117.489757376257 908.5464315770577 1.047689091343889 1.0869419446839896 1.4643642138043533 1.4881683552545195 1.3728334115676708 1.4252595109590533 1.3819244159022879 1.130585652414262 1.033212508568806 1.2299753964544387 1.0 9.827416435543137 -8.470077387461824 3.0719878120947066 1.0161056324613378 1.331885946397098 0.318374775231296 0.1487004830485726 0.15896970230179092 2.9885663686468056 0.02448123779539115 0.02921874925775049 3.3878378246618083e-09 8.470077387461824 0.3157803139357602 KSIDKDEEFAGS(ph)SPQSSK ddPTM_A549_PD325901_60min_R1 2 KSIDKDEEFAGSSPQSSK 18 2 A0A590UJ38;H3BQ24;A0A590UJL5;Q9Y2M0-2;Q9Y2M0 A0A590UJ38 FAN1 Fanconi-associated nuclease 1 1 KSIDKDEEFAGS(0.56)S(0.44)PQSSK;KSIDKDEEFAGS(0.5)S(0.5)PQS(0.001)SK 80.07 6.0134e-05 8501400.0 3022.9 3050.6000000000004 3390.9 3311.2 3925.6 3779.2999999999997 3570.4 3796.0 3762.7000000000003 3893.3 4516.299999999999 True False 3329.782582658637 3307.6847680816327 3621.0268651381657 3515.72530371918 3649.8793985848033 3748.52263382292 3706.2735257978475 3720.2858020956105 3604.56680414172 3647.4763735652677 3960.8237311845137 0.84067931537636 0.8351002196940597 0.9142105559075892 0.8876247827034142 0.9214950339366099 0.9463997613198244 0.9357330134682512 0.9392707311877854 0.9100548392906511 0.9208883356378151 1.0 11.951584782974932 -2.0000000000000004 0.06505904963888695 1.0962299598372083 0.48718697821202334 0.5502918729986968 0.029971228723951263 97.70038555177145 0.4590465793003659 0.7955967952852597 5.51504743968609 0.00999999999999999 2.0000000000000004 -0.609042981625185 KSIKPSDS(ph)PR ddPTM_A549_PD325901_60min_R1 1 KSIKPSDSPR 10 2 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 KS(0.001)IKPS(0.183)DS(0.816)PR 56.568999999999996 0.011308 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSIRDT(ph)PAK ddPTM_A549_MK2206_60min_R1 3 KSIRDTPAK 9 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 KSIRDT(1)PAK;KSIRDT(1)PAK;KS(0.022)IRDT(0.978)PAK 93.62299999999999 0.00033552 235933000.0 16200.0 19411.600000000002 16535.0 17170.0 25406.600000000002 17637.3 18173.5 18536.899999999998 27798.0 25411.2 26363.1 True False 18934.16394802652 20399.567526352723 18879.911634931606 21376.650770790588 21669.3227959195 19503.667379307783 21475.389708405684 21164.562341875364 21501.79738428435 19670.792271155125 19816.41468545473 0.9554787911217975 1.0294277673410837 0.9527410449676088 1.0787345294343822 1.093503700839729 0.9842177653671881 1.083717213698028 1.0680318653913807 1.0850498299304714 0.9926514247601766 1.0 14.274408343920024 -6.261825277117524 24.999993240361135 1.0479461198049083 0.9842370576742153 0.3476431009937978 0.0419545090457531 33.05059971724823 2141268.3292770474 0.006078344337912768 0.014997376297310364 5.472360795157496e-07 6.261825277117524 -0.06370906213069294 KSIRDT(ph)PAK ddPTM_A549_PD325901_60min_R1 4 KSIRDTPAK 9 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 KSIRDT(1)PAK;KSIRDT(1)PAK;KSIRDT(1)PAK;KSIRDT(1)PAK 90.79299999999999 0.00036329 316261000.0 28011.399999999998 28444.1 30496.4 29284.199999999997 31993.800000000003 34463.4 35870.6 37029.9 32187.2 32912.8 37529.9 True False 30855.09670709721 30841.184131577615 32566.0690937508 31093.018524756357 29746.665860618094 34182.74149670384 37235.67531214548 36291.309595105435 30834.483918003098 30834.6801910664 32913.96022163759 0.9374471044907295 0.9370244092141383 0.9894302865548799 0.9446757034213054 0.9037704870610701 1.038548423420411 1.131303406256984 1.1026114557690805 0.9368208416844519 0.9368268049007279 1.0 15.006412002134006 -7.26195400773619 24.997334489427157 0.9982099966675733 0.9448985776942482 0.2540123146019936 0.06147624066227519 81.29079710167574 3948576.4140723622 0.010592368212264442 0.01756572233500937 5.470738955542421e-08 7.26195400773619 -0.05331141897332503 KSKS(ph)PIPGQGYLGTER ddPTM_A549_MK2206_60min_R1 1 KSKSPIPGQGYLGTER 16 2 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KRE4 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 KS(0.247)KS(0.753)PIPGQGYLGTER 68.458 0.00040252 14203000.0 1650.3 2349.3 2025.1 1511.9 2989.2 1947.7 1703.2 1708.6 3101.8 2369.5 2192.0 True False 1928.8302940387746 2468.869335328383 2312.2896312004823 1882.3155678717712 2549.4926397692966 2153.804321221377 2012.649393422102 1950.7992823680481 2399.2472525567746 1834.2283043107789 1647.665903877647 1.1706440544162686 1.4984040936442884 1.4033728717446283 1.1424133760624016 1.5473359215416633 1.307185101149799 1.2215154714833245 1.1839774542745598 1.456149117919077 1.113228294640359 1.0 10.686208022521273 -10.929118289837685 1.0843024861440793 0.9923337286617959 1.3374658855977164 0.3588485318468724 0.1356683496931998 0.37466741853970936 0.753189020447982 0.10168374512403483 0.021829476609125306 1.1772852698130403e-11 10.929118289837685 0.3451321569359205 KSKS(ph)PTLR ddPTM_A549_PD325901_60min_R1 1 KSKSPTLR 8 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KS(0.04)KS(0.541)PT(0.419)LR 48.998000000000005 0.0070459 20158000.0 2573.9 2125.3 2243.0 2116.8 2747.7 2833.2 2561.3 3281.5 2891.3 2994.0 2677.9 True False 2835.2004331949665 2304.406489740998 2395.2234682547128 2247.549928398394 2554.711031050402 2810.1273585444646 2658.77167309714 3216.0479082130487 2769.788715766589 2804.9583290407627 2348.535276606738 1.2072207138789002 0.981210081319494 1.0198797063484741 0.9570007105218995 1.0877890813467173 1.196544666173656 1.13209782266445 1.369384543739845 1.17936858064508 1.1943437073227547 1.0 11.197545548687156 -6.9920863706969785 24.700213400886977 1.1221706348970404 1.0338633113906255 0.17335164637118694 0.10832591227809127 311.35400644514056 971795.4878336074 0.017843474842552436 0.033677095413081934 1.0183888349382676e-07 6.9920863706969785 -0.0883073235064149 KSLDS(ph)DES(ph)EDEEDDYQQK ddPTM_A549_PD325901_60min_R1 3 KSLDSDESEDEEDDYQQK 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 KSLDS(1)DES(1)EDEEDDYQQK;KS(0.001)LDS(0.984)DES(0.996)EDEEDDY(0.02)QQK;KS(0.043)LDS(0.954)DES(0.997)EDEEDDY(0.006)QQK 201.29 2.3367e-49 544484700.0 22308.2 22402.6 23697.5 23153.8 24150.9 21941.8 22785.2 24362.899999999998 25397.5 24057.600000000002 24887.7 True False 24572.91204157116 24290.54572393153 25305.75485464381 24583.957639904937 22454.62410008195 21763.113255580593 23652.303254539846 23876.962847174687 24330.131397185334 22538.5990303043 21826.67067612888 1.125820442622326 1.1128836864019445 1.1593960082203416 1.126326502318634 1.0287700049756028 0.9970880845048989 1.083642283585082 1.0939351768975076 1.1146973241225657 1.0326173590438614 1.0 14.413804465657039 -14.999999999997192 0.2702742420298495 0.320959474704365 1.1028915012754066 0.3060009542357528 0.044355640452779926 37.92432778619499 0.4965127749186289 13.917083145839712 0.021462352517106736 1.0000000000064666e-15 14.999999999997192 0.7819320265710417 KSLDS(ph)DES(ph)EDEEDDYQQKR ddPTM_A549_PD325901_60min_R1 6 KSLDSDESEDEEDDYQQKR 19 2 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 KS(0.004)LDS(0.996)DES(1)EDEEDDYQQKR;KS(0.005)LDS(0.995)DES(1)EDEEDDYQQKR;KSLDS(1)DES(1)EDEEDDYQQKR;KS(0.465)LDS(0.535)DES(1)EDEEDDYQQKR;KSLDS(1)DES(1)EDEEDDYQQKR;KS(0.129)LDS(0.872)DES(0.998)EDEEDDYQQKR 144.27 1.0077e-20 183152400.0 25937.800000000003 25456.459999999995 24976.37 25545.5 31710.000000000004 35267.5 32879.1 36020.299999999996 33171.899999999994 34778.5 38532.2 True False 28570.986361600855 27601.765223654147 26671.416663313874 27123.387516960112 29482.798993561264 34980.29317290234 34130.33214263387 35301.8468591213 31777.800401389595 32582.579574664043 33792.98367574075 0.84547096035534 0.8167898250271656 0.7892590047460268 0.8026336998597554 0.872453266526043 1.0351347933214297 1.0099827961369183 1.044650191230783 0.9403668141976523 0.9641817925078445 1.0 15.04443611519942 -7.062129318650568 4.134274286636985 0.9841605511113702 0.8136463787769211 0.8791777029063564 0.032301526713482104 0.06892349910699958 2.3457383628806636 0.005641233698916084 0.010214944726547347 8.667037613814329e-08 7.062129318650568 -0.1705141723344491 KSLDS(ph)DESEDEEDDYQQK ddPTM_A549_PD325901_60min_R1 1 KSLDSDESEDEEDDYQQK 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 KS(0.001)LDS(0.942)DES(0.058)EDEEDDYQQK 194.33 8.1707e-49 21795000.0 4219.6 5193.3 5193.4 5388.4 6054.8 5635.0 5574.6 4786.9 5344.8 5370.0 5755.6 True False 4647.970685694659 5630.957616887933 5545.855354451196 5721.229230055704 5629.531735926041 5589.110428278294 5786.744453538167 4691.4215242495975 5120.17664304267 5030.937283550064 5047.697687754488 0.9208100352306061 1.1155496951706143 1.0986900756567135 1.1334334153836465 1.1152672137206352 1.1072593435690994 1.146412644239091 0.9294180861169238 1.0143588146065112 0.9966795942940316 1.0 12.301409792954473 -8.253640844791558 24.994825755976915 1.001167822739744 1.0954794996730985 0.4016126118759492 0.060925504086415894 480.2228436804817 1539146.2663547744 0.00925768887789954 0.011840850534636514 5.57646724011124e-09 8.253640844791558 0.09431167693335452 KSLDSDES(ph)EDEEDDYQQK ddPTM_A549_MK2206_60min_R1 2 KSLDSDESEDEEDDYQQK 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 KSLDSDES(1)EDEEDDYQQK;KSLDSDES(1)EDEEDDYQQK 226.16 1.8665e-64 29682000.0 7515.8 9350.1 6855.4 6268.9 10273.3 7436.9 6687.3 8090.0 10154.6 9793.2 10902.5 True False 8784.283296331952 9825.9801524939 7827.598803877235 7804.78078142161 8762.111178958217 8223.867821785316 7902.295848186722 9236.782274585918 7854.599313564067 7580.909318327213 8195.108356307497 1.071893489922069 1.1990055195464469 0.9551550099825827 0.9523706633377867 1.0691879592067037 1.0035093453591353 0.9642698430100186 1.1271092306518045 0.9584497204992596 0.9250529692499361 1.0 13.000547309529713 -5.767768224141587 24.999961985368 0.9930557995676255 1.1354495138469034 0.4357577194990443 0.061603599606973265 80.71659527883395 318849.36919620004 0.007637826517179284 0.024603771886818986 1.7069931402615553e-06 5.767768224141587 0.14239371427927794 KSLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_A549_MK2206_60min_R1 2 KSLPAPVAQRPDSPGGGLQAPGQK 24 2 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 KSLPAPVAQRPDS(1)PGGGLQAPGQK;KSLPAPVAQRPDS(1)PGGGLQAPGQK 175.89 5.7875e-42 152072000.0 6467.799999999999 6429.299999999999 7236.8 6942.8 9241.4 7663.5 7026.700000000001 6875.1 10455.8 10709.3 10088.5 True False 7559.406517471972 6756.523908239376 8263.087058946056 8643.78631167414 7882.00230200855 8474.446483380407 8303.360434921968 7849.66647911071 8087.577994481631 8290.061692068131 7583.247021564612 0.9968561614800567 0.8909803266365623 1.0896502560773995 1.1398529267335817 1.039396749122686 1.1175221457617661 1.0949610913780807 1.0351326360315676 1.0665059401972328 1.0932073910415339 1.0 12.888600003620592 -5.766636277971269 24.999752018351707 1.052891999521441 0.9439182387645242 0.4812452476147121 0.048214345638232146 86.04882130007616 413948.4968827658 0.007265840866052766 0.023608490678082947 1.711448054368685e-06 5.766636277971269 -0.10897376075691678 KSLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_A549_PD325901_60min_R1 2 KSLPAPVAQRPDSPGGGLQAPGQK 24 2 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 KSLPAPVAQRPDS(1)PGGGLQAPGQK;KSLPAPVAQRPDS(1)PGGGLQAPGQK 220.78 5.523299999999999e-76 297230000.0 11072.7 10770.9 11078.7 10108.900000000001 12356.8 11992.900000000001 13258.8 13249.599999999999 11506.900000000001 11703.1 12468.6 True False 12196.792352709079 11678.601543476832 11830.567203635082 10733.303794022368 11488.900996645785 11895.233798633319 13763.370889493759 12985.326333889869 11023.305009322654 10964.164268736464 10935.041244967626 1.1153860401141256 1.067997941832309 1.0818950691273874 0.9815512857769879 1.0506499920092254 1.087808772930562 1.2586482831811676 1.1874967860652375 1.0080716443932616 1.0026632751643474 1.0 13.416671041526497 -8.889976945009261 11.96404203645337 1.0035611830181252 1.1007473891254806 0.30051238955799986 0.06809045982399056 0.42737553058919336 44.12089909075723 0.012916167451153602 0.013744136557338592 1.2883179416245725e-09 8.889976945009261 0.0971862061073554 KSLS(ph)DS(ph)ESDDSK ddPTM_A549_MK2206_60min_R1 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 KS(0.137)LS(0.857)DS(0.839)ES(0.165)DDS(0.003)K 41.092 0.058664 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSLS(ph)DS(ph)ESDDSK ddPTM_A549_PD325901_60min_R1 2 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 KS(0.015)LS(0.983)DS(0.921)ES(0.011)DDS(0.071)K;KS(0.261)LS(0.718)DS(0.609)ES(0.408)DDS(0.004)K 108.71 4.9434e-13 4022200.0 5332.5 5578.0 4802.2 4817.4 6132.8 5762.8 5114.6 5707.9 5476.7 6113.9 6704.5 True False 5873.8514744209815 6048.077635992702 5128.106169974493 5114.959856890789 5702.053285011432 5715.869667450254 5309.238901816508 5594.051456739074 5246.533344737278 5727.867310595297 5879.88900332719 0.998973189986615 1.028604048914927 0.8721433630928588 0.8699075533562692 0.9697552592888866 0.9721050285500077 0.9029488309749087 0.9513872546868873 0.8922844192753431 0.9741454825684854 1.0 12.521573205733784 -11.082954772736018 1.4229952869310014 0.999820859288044 0.9334717764130419 0.10181149239511267 0.049931649517463025 0.5897537715423093 2.14229094664492 0.03677928308060093 0.00817594234494582 8.261239773378978e-12 11.082954772736018 -0.06634908287500207 KSLS(ph)DSES(ph)DDSK ddPTM_A549_PD325901_60min_R1 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 KS(0.018)LS(0.765)DS(0.546)ES(0.658)DDS(0.013)K 57.803999999999995 0.022068 4019800.0 1281.9 1282.9 1310.4 967.4 1373.5 1189.9 1347.1 1182.7 1499.3 1126.9 1594.6 True False 1412.0375443150965 1391.014485337942 1399.3316240753359 1027.1541008751924 1277.0300983177667 1180.209848910088 1398.3646276614052 1159.1101206897995 1436.2896349561963 1055.7473416820435 1398.4743090022425 1.0096985945508936 0.9946657413609387 1.0006130359832675 0.7344819238102609 0.9131594982455404 0.8439267288021346 0.9999215707145056 0.8288390521215795 1.0270404151942796 0.7549279488983094 1.0 10.449638035354628 -8.794786750159423 24.919948369712746 1.0127691133698213 0.91542285508478 0.0 0.11352482906356483 195.9601496116468 146436.98006797538 0.01418550492020512 0.015102066611261653 1.6040328190153646e-09 8.794786750159423 -0.09734625828504129 KSLS(ph)DSESDDSK ddPTM_A549_MK2206_60min_R1 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.009)LS(0.828)DS(0.156)ES(0.006)DDSK 139.88 2.0226e-09 446870000.0 5997.4 6464.5 6210.3 5674.3 8008.1 6284.5 6669.1 5758.3 9149.3 9201.1 9989.1 True False 7009.614497647794 6793.515437888026 7091.013923581236 7064.503754729011 6830.119098265922 6949.521618686524 7880.789143771335 6574.556659054154 7076.998158429841 7122.565119558521 7508.530784865055 0.9335534072494015 0.9047729352833866 0.9443943331596366 0.9408636599012061 0.9096478783883251 0.9255501266232635 1.049578055890327 0.8756116006484901 0.942527687666267 0.9485963797225784 1.0 12.87431492385935 -14.999999999999998 0.18059097030513893 1.2751916992446102 0.9223989782156533 0.04697362878877687 0.04381103849110586 50.406124147671754 0.5609635115194779 4.879873327363149 0.04443832392932229 1.000000000000004e-15 14.999999999999998 -0.35279272102895687 KSLS(ph)DSESDDSK ddPTM_A549_PD325901_60min_R1 2 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.385)LS(0.493)DS(0.112)ES(0.007)DDS(0.003)K;KS(0.007)LS(0.669)DS(0.324)ESDDSK 162.37 3.3200999999999997e-14 1090650000.0 18796.2 18155.9 18612.9 19459.9 21667.4 19560.9 20193.2 19422.2 20565.2 20444.2 21815.1 True False 20704.376386968896 19685.96141113659 19876.083322460163 20661.89382636051 20145.556572472058 19401.602515795723 20961.663276143037 19034.808984578853 19700.916161409426 19153.34972297099 19131.980997312694 1.0821867526356557 1.0289557267437026 1.03889311437493 1.0799662528027134 1.0529780776649178 1.0140927130609685 1.0956347530915562 0.9949209643921615 1.0297373891483923 1.0011169112943035 1.0 14.223698643041692 -9.124351189361109 0.34218406307718596 0.9967771214637193 1.0589311676073183 0.3677260420306814 0.026956876807503877 1.0242012032839327 0.3300719904470101 0.02335961772568015 0.015487911079713892 7.510153448133383e-10 9.124351189361109 0.062154046143598984 KSLS(ph)DSESDDSKSK ddPTM_A549_MK2206_60min_R1 1 KSLSDSESDDSKSK 14 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.127)LS(0.795)DS(0.068)ES(0.009)DDSKSK 67.995 0.0011459 9042900.0 1140.2 1727.6 2222.7 1487.0 2637.8 1296.4 1254.4 925.25 2498.2 3037.5 2787.5 True False 1332.63788478641 1815.5274608237837 2537.9122824894143 1851.3150667539671 2249.78311427253 1433.5841875193262 1482.308242783399 1056.4070209592858 1932.3616888056397 2351.3266403646307 2095.2868189137507 0.6360169274950543 0.8664815930856659 1.21124814969491 0.8835616441827927 1.0737351535666482 0.6841947243588027 0.707448846335923 0.5041825354998194 0.9222420870319914 1.122197982223559 1.0 11.032932029255775 -8.986132407910201 23.633417080460315 0.9656954242677409 0.8298033057672564 0.15504235947443912 0.19415610982334186 78.93698645328506 134530.8204759143 0.0352903248858424 0.03554089173866715 1.0324465849618493e-09 8.986132407910201 -0.13589211850048455 KSLS(ph)PGVSR ddPTM_A549_MK2206_60min_R1 1 KSLSPGVSR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KS(0.069)LS(0.842)PGVS(0.089)R 88.09200000000001 0.00047196 70743000.0 5294.8 4965.7 4488.4 4996.2 5794.1 3874.8 4303.0 4020.2 6561.0 6737.2 6781.2 True False 6188.432794568569 5218.432919780423 5124.9226115649835 6220.269224287943 4941.795565397861 4284.828764115926 5084.799401065823 4590.075661346149 5074.943975764067 5215.26184081139 5097.240888401045 1.2140750123563064 1.0237760062811931 1.0054307268912737 1.2203208285569531 0.9695040265103214 0.8406172786273861 0.9975591721859698 0.9005020091930581 0.9956256898339422 1.0231538895246066 1.0 12.315500819245305 -6.811786331598495 24.999860604476247 0.9766246922246739 1.101429949876281 0.45566086609030154 0.07972909734676786 84.64890868672026 42032.258066221104 0.01113824621847269 0.02104932956675471 1.542459140273987e-07 6.811786331598495 0.1248052576516071 KSLS(ph)PGVSR ddPTM_A549_PD325901_60min_R1 1 KSLSPGVSR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KS(0.001)LS(0.965)PGVS(0.034)R 97.69 0.00035792 118240000.0 4181.0 4710.4 4859.4 5477.8 4988.6 5412.0 5319.7 5523.4 5545.6 4674.5 5506.5 True False 4605.452042110476 5107.361939150237 5189.188105946034 5816.151265013572 4638.21794573572 5367.9264663428785 5522.144094551535 5413.231453976522 5312.537717343477 4379.351272244839 4829.235408579486 0.9536607045348333 1.0575922495053025 1.0745361670973972 1.2043627557854726 0.9604456095670114 1.1115478977906874 1.1434820685570737 1.1209292974949048 1.1000784322721915 0.9068415394421661 1.0 12.237579076296978 -2.00319415331501 24.54652663311005 1.0640291389124503 0.00029108700962643397 0.0 0.08773500711066566 0.0 0.0 0.009852791798629978 0.0 0.009926721706199494 2.00319415331501 -1.063738051902824 KSLSDS(ph)ESDDSK ddPTM_A549_MK2206_60min_R1 4 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KSLS(0.017)DS(0.966)ES(0.017)DDSK;KSLS(0.21)DS(0.737)ES(0.054)DDSK;KS(0.011)LS(0.007)DS(0.78)ES(0.201)DDSK;KS(0.008)LS(0.03)DS(0.961)ES(0.001)DDSK 290.38 8.009199999999997e-110 270470000.0 26680.2 28607.699999999997 27735.2 25586.1 34364.7 27364.000000000004 27545.5 27236.9 39248.9 36535.6 37230.9 True False 31183.16549173687 30063.70973663382 31668.468411076807 31854.695648603665 29309.698152642824 30259.64031724688 32550.160795272735 31097.81398450794 30359.08681761416 28282.1825849238 27985.44000943351 1.1142638986996614 1.07426253532193 1.1316051632706792 1.1382595963424509 1.0473195398308164 1.0812636966596476 1.1631105597875366 1.11121404466127 1.0848172052102996 1.0106034629218001 1.0 14.772388810664728 -10.149582274315826 0.670104875005009 1.0001387819971488 1.107178061747469 0.6061806579761597 0.03104457146353772 0.3729385151697901 0.3200331392950948 0.020114006562638453 0.006937106606806139 7.086270488659454e-11 10.149582274315826 0.10703927975032013 KSLSDS(ph)ESDDSK ddPTM_A549_PD325901_60min_R1 2 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KSLS(0.134)DS(0.798)ES(0.061)DDS(0.007)K;KSLS(0.15)DS(0.841)ES(0.01)DDSK 208.47 1.7683e-31 1419570000.0 20016.3 19223.3 21851.9 20673.2 23512.2 20765.4 20009.8 21691.6 21758.5 20694.3 21041.7 True False 22048.340040778745 20843.31495517721 23334.901340149427 21950.136611756276 21860.784184686578 20596.29346714644 20771.283888782702 21258.944021269 20844.06591222196 19387.658366288662 18453.70429432617 1.194792096433332 1.1294921942358076 1.2645104185030236 1.1894704857986225 1.184628507968883 1.1161061832706962 1.1255888550879782 1.1520149928816914 1.1295328883443059 1.0506106555663 1.0 14.171622823512044 -11.740734174889779 0.19178134783478512 0.8071373965622661 1.2153348950489544 0.6940071246468211 0.037914536404385336 4.569295183225396 0.16383759418904392 0.4576266953917389 0.04569131624959673 1.8166272527206693e-12 11.740734174889779 0.4081974984866883 KSLSDS(ph)ESDDSKSK ddPTM_A549_PD325901_60min_R1 2 KSLSDSESDDSKSK 14 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.004)LS(0.004)DS(0.496)ES(0.496)DDSKSK;KS(0.013)LS(0.013)DS(0.622)ES(0.35)DDS(0.001)KSK 65.71600000000001 0.0014944000000000001 56140000.0 2330.3 2809.9 3030.3999999999996 3066.3 3942.5 4866.1 3892.6 4217.4 3505.5 3447.2 4281.0 True False 2566.870340523809 3046.700134344909 3236.061167275563 3255.6983869274377 3665.5924008866364 4826.472094950312 4040.7350231124506 4133.280648513705 3358.176025704624 3229.5432036971665 3754.46413949492 0.68368487356737 0.8114873444375941 0.8619235787163234 0.8671539442018535 0.9763290484856677 1.2855288839167356 1.0762481336833443 1.1008976234541281 0.8944488217049243 0.8601875217621948 1.0 11.874391296673194 -6.009533237597899 1.2312340240413289 0.9946064822662862 0.7128417222869631 0.4727610983956415 0.11381687510371288 0.472521059852012 1.1699399492110685 0.01835916040897524 0.11909412674073251 9.782880811872551e-07 6.009533237597899 -0.28176475997932315 KSLSGS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 KSLSGSPLK 9 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KSLS(0.023)GS(0.976)PLK;KS(0.006)LS(0.031)GS(0.963)PLK 83.204 0.00060727 74318000.0 19300.0 19829.6 18300.4 16361.9 25412.0 19278.5 19970.2 18429.800000000003 26570.0 25439.0 26104.0 True False 22557.36816030319 20838.84194093037 20895.671901052447 20370.566234513608 21673.928463072854 21318.538073967404 23598.526841544193 21042.280588895395 20551.937423571297 19692.3122318472 19621.656366250954 1.1496159008829463 1.0620327637972993 1.064929051402245 1.0381675152333607 1.1045921943853725 1.0864800440922546 1.2026776129936418 1.0724008308028419 1.0474109341207511 1.0036009123938066 1.0 14.26015921165261 -9.084448855071455 1.5391722068136415 1.0154874765324131 1.096433867042429 0.4162829908521224 0.043700957476774854 0.26731553950367204 1.2961061505267197 0.009488753735493767 0.008999151819153199 8.232867860338567e-10 9.084448855071455 0.08094639051001584 KSLSGS(ph)PLK ddPTM_A549_PD325901_60min_R1 3 KSLSGSPLK 9 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KS(0.005)LS(0.027)GS(0.969)PLK;KS(0.001)LS(0.002)GS(0.997)PLK;KSLS(0.005)GS(0.994)PLK 67.456 0.0020523000000000004 120215100.0 13488.300000000001 14484.5 13884.2 13621.2 15399.5 16655.4 14694.5 15973.600000000002 17352.1 16225.8 16360.999999999998 True False 14857.622286438354 15705.159648357176 14826.465304477084 14462.550588010297 14317.892245390944 16519.763944480266 15253.707238638937 15654.99401695322 16622.85158055319 15201.300218887642 14348.700720924187 1.0354681288161531 1.0945353139504062 1.0332967139565599 1.007934507054014 0.9978528735017578 1.1513073041094304 1.0630723669910414 1.091039134583392 1.1584917619971467 1.0594199791706673 1.0 13.80863248590383 -7.231954670783054 24.923659998258028 1.0817337568106065 1.0357238498414616 0.2398829950331639 0.04672611522641541 1256.3780670717758 1062028.319392376 0.009372682373752921 0.016232277051625776 5.8619934551389415e-08 7.231954670783054 -0.046009906969144865 KSLSPGVS(ph)R ddPTM_A549_MK2206_60min_R1 1 KSLSPGVSR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KS(0.002)LS(0.018)PGVS(0.98)R 78.934 0.00075001 77026000.0 2903.3 2846.6 3027.3 2796.5 2868.1 2411.0 2668.9 2243.9 3520.2 4190.5 4255.3 True False 3393.3060611299607 2991.4797811883445 3456.616661168943 3481.6426255396545 2446.2062893490966 2666.1304197077275 3153.804583198831 2561.979696655544 2722.8803206042803 3243.8631395713533 3198.591569694592 1.0608750717910385 0.9352490669741798 1.0806683460054851 1.0884924035087382 0.7647760697320494 0.8335326225981065 0.9859979039149293 0.8009711902355094 0.8512747755613782 1.0141535950715594 1.0 11.643221070177628 -6.7325674149887105 24.9834949549625 0.9057553505154166 1.0365551623022697 0.401701647578496 0.08613317021474155 199.05539197827216 172245.69079150667 0.012976699279650528 0.027009438828662285 1.8511115261772516e-07 6.7325674149887105 0.13079981178685318 KSLSPGVS(ph)R ddPTM_A549_PD325901_60min_R1 1 KSLSPGVSR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KS(0.016)LS(0.439)PGVS(0.545)R 60.157 0.0034352 123120000.0 3246.2 3228.7 3264.3 3347.5 3341.1 3837.7 3614.8 3665.3 3041.0 3349.5 3810.6 True False 3575.751834273863 3500.793880123636 3485.835027830524 3554.2674722759 3106.432662169268 3806.44704358538 3752.36319209446 3592.192716127774 2913.197345362364 3138.0119983707523 3341.9203573836357 1.0699691949192027 1.0475395897418636 1.043063465031093 1.063540447462521 0.9295352162734575 1.138999927145307 1.122816462039256 1.0748887860810885 0.8717135759761445 0.9389846743168584 1.0 11.706461637038814 -8.744998360318947 24.98698717491532 0.9394202984648798 1.0605518293364 0.4821993985431954 0.05738940088540021 173.3347890545677 263433.27335119975 0.011359217465171599 0.012861646794107024 1.798877706788013e-09 8.744998360318947 0.12113153087152018 KSLT(ph)FTGGAK ddPTM_A549_PD325901_60min_R1 2 KSLTFTGGAK 10 1 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 KS(0.011)LT(0.986)FT(0.003)GGAK;KS(0.122)LT(0.877)FT(0.001)GGAK 58.486999999999995 0.0068522999999999995 6664700.0 4947.0 5516.7 5263.6 6848.0 7754.2 7575.4 6397.1 7046.5 7820.7 6669.6 7435.6 True False 5449.215798211084 5981.611669860336 5620.819548598087 7270.985407063587 7209.571742537768 7513.7084540158685 6640.545141127443 6905.952029627687 7492.023176216844 6248.480317758941 6521.068338151937 0.8356323712067378 0.9172748021768958 0.8619476529195553 1.114999112112384 1.105581381559475 1.1522204743747932 1.0183216609273207 1.0590215700123802 1.1488950564103542 0.9581988707589213 1.0 12.670892623335225 -6.257475301512433 24.8701919405884 1.0779587277401461 0.8761839139570305 0.676887450949097 0.060717317384009456 138.92052509903692 871566.5750767548 0.00870011363314053 0.0221121733885321 5.527448418538773e-07 6.257475301512433 -0.20177481378311557 KSMS(ph)EDGGLQESNPCADDFVSASTADVSHTNLGTIR ddPTM_A549_MK2206_60min_R1 1 KSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIR 36 1 A0A1W2PRP5;H7C0I1;B8ZZW5;Q8NBF6-2;Q8NBF6 A0A1W2PRP5 AVL9 Late secretory pathway protein AVL9 homolog 1 KS(0.456)MS(0.524)EDGGLQES(0.02)NPCADDFVSASTADVSHTNLGTIR 48.771 0.0026847 4756800.0 927.52 1172.7 1085.4 964.07 1373.7 1046.7 1245.4 869.66 1867.1 1512.3 2114.2 True False 1084.0627003131822 1232.3854209933154 1239.326041037482 1200.2671932787468 1171.630549729386 1157.461099256772 1471.673059281287 992.9369682220506 1444.2048311460294 1170.6703796620357 1589.1857910484116 0.682149756447299 0.7754822802564141 0.7798496865617446 0.7552717876283749 0.7372520924419054 0.7283359225689882 0.9260547555678813 0.624808611941461 0.9087702893399671 0.7366479025021521 1.0 10.63407208408443 -8.940398102115488 6.22772360201214 0.9605090547924946 0.7574274772907047 0.16454662044176493 0.09800905148334715 0.09104635181051185 6.7508896974881365 0.012178665967630195 0.012814984415078612 1.1471016326432942e-09 8.940398102115488 -0.2030815775017899 KSNFAEALAAHK ddPTM_A549_PD325901_60min_R1 1 KSNFAEALAAHK 12 1 H7BZ94;P07237;I3L0S0;I3L312;I3NI03;I3L3U6;I3L514;I3L1Y5;I3L3P5 H7BZ94 P4HB Protein disulfide-isomerase 0 52.576 0.007715100000000001 2017300.0 1343.3 1187.5 1365.9 1880.6 1957.8 2089.1 1422.2 1871.3 1849.9 1871.1 1716.0 False True 1479.6708271148068 1287.574792531612 1458.5981878239477 1996.7603908475155 1820.2908820433365 2072.087062238897 1476.3225992577018 1833.9754534935487 1772.155136200537 1752.9584266760771 1504.9428786202484 0.9832073018421726 0.8555638960277866 0.9692050167121359 1.3268014482238502 1.2095415101151237 1.3768542923958775 0.980982481282754 1.218634593742828 1.1775564118588158 1.1648006390004733 1.0 10.55549301397582 -6.0206765566394305 24.057124230743913 1.1313185912645158 0.9176352642748304 0.4089256572878127 0.12191699338431078 400.4350107258355 465907.4316787445 0.01869017231054486 0.050147031874576226 9.535060288558327e-07 6.0206765566394305 -0.2136833269896854 KSNFSNS(ph)ADDIK ddPTM_A549_MK2206_60min_R1 1 KSNFSNSADDIK 12 1 P45973 P45973 CBX5 Chromobox protein homolog 5 1 KS(0.042)NFS(0.23)NS(0.728)ADDIK 92.935 0.00011116 1880100.0 1074.8 1305.9 1379.3 1122.2 1869.3 1968.5 1567.7 1564.7 2897.6 2592.0 2632.9 True False 1256.1999636628952 1372.3647320501157 1574.9054803786614 1397.1390503774728 1594.3284462467361 2176.805363415453 1852.530797362512 1786.5010166927798 2241.298226516381 2006.4653997778178 1979.0782656566862 0.6347399117366742 0.693436311168192 0.795777260408691 0.7059544206120025 0.8055914078353619 1.099908680313438 0.9360573704990974 0.9026934647781569 1.132496003523482 1.0138383279713519 1.0 10.950612951742851 -7.113043496416004 3.5803975340115812 1.0424641023255925 0.7151565379836079 0.7908812050681701 0.07371284317259602 0.08703993120609994 2.0437315671815064 0.012551405202255218 0.022694406431987828 7.70826263711196e-08 7.113043496416004 -0.3273075643419846 KSNFSNS(ph)ADDIK ddPTM_A549_PD325901_60min_R1 1 KSNFSNSADDIK 12 1 P45973 P45973 CBX5 Chromobox protein homolog 5 1 KS(0.102)NFS(0.102)NS(0.797)ADDIK 44.601000000000006 0.024526 3513300.0 1378.3 1625.3 1543.1 1513.5 1816.8 2256.3 2377.5 2308.6 1882.5 1520.1 2235.8 True False 1518.2240013491673 1762.269734990845 1647.8240454141107 1606.9854575921065 1689.194235619744 2237.925440873881 2467.9770635179193 2262.553161938334 1803.3850715700908 1424.1206265781113 1960.8107739039356 0.7742837919675509 0.8987454365533707 0.8403789225073083 0.8195515237773965 0.8614774347942773 1.1413265729962385 1.2586513172835263 1.153886541246219 0.9197139752448354 0.726291718472515 1.0 10.93723460105775 -7.104554363269426 7.978501165104512 1.0130141315634293 0.838696142141645 0.3404737013932999 0.1334425193705864 0.2754661389781641 18.889841528303254 0.018163084519967537 0.03154948205335457 7.860417913800525e-08 7.104554363269426 -0.17431798942178434 KSNLDEEVNVIPPHT(ph)PVR ddPTM_A549_MK2206_60min_R1 7 KSNLDEEVNVIPPHTPVR 18 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR 143.06 6.814e-17 597501500.0 28480.7 32966.4 29013.5 28367.33 40483.9 32237.100000000002 26722.2 30424.799999999996 50531.6 43232.3 47600.700000000004 True False 33287.54587373818 34644.24894912083 33128.050572729844 35317.32712345785 34528.77193869804 35648.40852474488 31577.27784224057 34737.60857204225 39086.27328238372 33466.09340386363 35780.13247751307 0.9303360152357898 0.968253791986206 0.9258783654182948 0.9870652979178856 0.9650263860928553 0.9963185169073655 0.882536638512619 0.9708630507132409 1.0924015808758807 0.935326145728953 1.0 15.126871108590956 -8.61591228782956 7.016159992651488 1.0434565378693654 0.9523040987399438 0.1242786486699482 0.04825034102353689 0.1356986043924815 8.791421068574895 0.007159762127932373 0.008118899352958169 2.4215180586086733e-09 8.61591228782956 -0.09115243912942161 KSNLDEEVNVIPPHT(ph)PVR ddPTM_A549_PD325901_60min_R1 4 KSNLDEEVNVIPPHTPVR 18 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR 159.39 6.4032e-23 861316000.0 32854.2 33565.7 35476.1 34820.5 38354.4 38004.100000000006 36024.9 38004.3 41263.6 39017.0 40413.399999999994 True False 36189.53419801626 36394.399337834395 37883.721481119486 36971.283201906816 35660.51925949688 37694.607209819216 37395.84728308169 37246.274422703405 39529.43439003435 36553.45996131713 35442.808001650104 1.0210684829579924 1.0268486440504372 1.0688690771723206 1.0431251158256296 1.006142607488567 1.0635333184680027 1.0551039658409869 1.0508838470408253 1.11530199266926 1.0313364550465447 1.0 15.113205287324288 KSPAKS(ph)PNPSTPR ddPTM_A549_MK2206_60min_R1 2 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KS(0.021)PAKS(0.974)PNPS(0.003)T(0.003)PR;KS(0.064)PAKS(0.728)PNPS(0.087)T(0.12)PR 53.255 0.004592000000000001 17821900.0 4135.889999999999 3902.44 3609.3 3749.3999999999996 4880.8 4224.5 3634.9 4260.5 5734.700000000001 6627.2 6664.5 True False 4833.927119197741 4101.057527331078 4121.153012637352 4668.003168316963 4162.840785556665 4671.533786003854 4295.314279092298 4864.438922234031 4435.799606434113 5130.110917209703 5009.5207191571935 0.9649480240119669 0.818652673028777 0.822664131695756 0.9318263023577856 0.8309858405490386 0.9325310838897574 0.8574301854200028 0.9710387869305847 0.8854738517141808 1.0240722026742706 1.0 12.290456866291905 -14.999996132175944 0.1981682238249846 1.5344409739259457 0.8662020323333854 0.46006784925006494 0.051646515399524646 32.34687615462974 0.37883090484932647 6.6941459292231045 0.041968291796688324 1.0000089060336715e-15 14.999996132175944 -0.6682389415925603 KSPAKSPNPS(ph)TPR ddPTM_A549_MK2206_60min_R1 1 KSPAKSPNPSTPR 13 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KS(0.206)PAKS(0.357)PNPS(0.403)T(0.034)PR 46.873000000000005 0.007345999999999999 13028000.0 2957.6 3089.4 2876.7 2489.4 4515.4 3037.5 3152.0 2797.6 4004.9 4580.3 4374.3 True False 3456.7705736224198 3246.6372641056932 3284.6593166137145 3099.3031117534147 3851.1906415142125 3358.926233870684 3724.6775998511416 3194.1683672906775 3097.796544511131 3545.6070488434975 3288.0405854616733 1.051316272951982 0.9874079044099857 0.9989716462555512 0.9425988004701717 1.17127223384728 1.0215586293923613 1.132795506332888 0.9714504077029769 0.9421406044098964 1.078334332161432 1.0 11.68301239149279 -8.418898738345968 24.49174540293537 0.9718124347926339 1.0408511079252414 0.04528391332847548 0.06956417897570766 33.88436982092486 7968.854853042137 0.010174739899209447 0.012300660169176018 3.811546844226661e-09 8.418898738345968 0.06903867313260748 KSPGDPAKPAS(ph)SPR ddPTM_A549_MK2206_60min_R1 3 KSPGDPAKPASSPR 14 2 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 KSPGDPAKPAS(0.5)S(0.5)PR;KSPGDPAKPAS(0.5)S(0.5)PR;KS(0.002)PGDPAKPAS(0.538)S(0.46)PR 51.147 0.0050100000000000006 11484500.0 2541.37 2411.8 2325.37 2549.59 3868.5099999999998 2760.74 2416.94 2679.39 3218.0699999999997 4013.9700000000003 3807.5000000000005 True False 2970.291125468896 2534.550318369298 2655.142432326636 3174.239664455443 3299.4573035842095 3052.879674369104 2856.066712621899 3059.2017377877337 2489.1822832018097 3107.211389176763 2861.992668345865 1.0378402287052761 0.8855893819721707 0.9277250992614243 1.1091012564647995 1.1528531641875883 1.06669723795399 0.9979294301521078 1.0689062105654692 0.869737477224382 1.085681114261074 1.0 11.4828042609354 -8.749873179607786 24.99931831420347 0.9384871385399844 1.029327386493299 0.0 0.08883276053432503 281.46268405426133 608356.1457033659 0.015197740730877558 0.017161932619678622 1.7787987696733189e-09 8.749873179607786 0.09084024795331458 KSPGDPAKPAS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 KSPGDPAKPASSPR 14 2 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 KSPGDPAKPAS(0.5)S(0.5)PR 40.179 0.035747 2952200.0 738.03 699.87 506.87 620.51 660.85 458.85 592.05 723.49 628.98 680.63 747.38 True False 812.9542622910297 758.8505010939782 541.2692462569178 658.837493419543 614.4341758087343 455.1132777312329 614.5807867321907 709.0594243830751 602.546157936869 637.6549056429578 655.456998032169 1.2402861892263006 1.1577426183139703 0.825789102690079 1.0051574632623084 0.9374134041644309 0.6943449823521397 0.9376370815740804 1.0817787078509082 0.9192764128628569 0.9728401825861084 1.0 9.356357323752261 -5.618592146122355 5.800760993618698 0.9444435748551219 1.220331819864627 0.5318677827428104 0.09751744767786276 0.11106486142163367 5.373495910591461 0.013375733988638719 0.05401117086139088 2.4066218416007406e-06 5.618592146122355 0.27588824500950504 KSPGGAGGGAS(ph)GDGGFYDPK ddPTM_A549_PD325901_60min_R1 1 KSPGGAGGGASGDGGFYDPK 20 1 Q92692-2 Q92692-2 PVRL2 Nectin-2 1 KS(0.001)PGGAGGGAS(0.999)GDGGFYDPK 70.533 0.00036297 3262900.0 1955.0 1631.0 2063.7 2173.6 2300.1 2374.0 2376.5 2480.0 2636.2 2101.4 2929.8 True False 2153.470160805067 1768.450093994997 2203.7550920362255 2307.858335396235 2138.54891091423 2354.66693109719 2466.939007970699 2430.534454477638 2525.4096816324422 1968.7172453728315 2569.4531735324026 0.8381044585624982 0.6882593200030137 0.8576747436913096 0.8981904629238542 0.8322972891442971 0.91640780044264 0.9601027305662978 0.9459345200427282 0.9828588073315963 0.7662008654807675 1.0 11.327245644947531 -6.7953040632854815 0.4555112149138856 0.9987111006954087 0.7366773350354068 0.17175472606481057 0.08306681400422346 0.5177281163152656 0.16058205871501527 0.010735101757322734 0.058578311376089244 1.6021233007990648e-07 6.7953040632854815 -0.2620337656600019 KSPGGGGGGGSGNDNNQAAT(ph)KSPR ddPTM_A549_PD325901_60min_R1 1 KSPGGGGGGGSGNDNNQAATKSPR 24 2 Q9NS37;E9PIM0;J3KN20 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 KSPGGGGGGGSGNDNNQAAT(0.542)KS(0.458)PR 51.956 0.0024820999999999997 12806000.0 327.15 377.83 476.04 402.89 214.35 318.98 362.73 228.82 309.58 404.58 473.96 True False 360.3620271648991 409.67106009450015 508.34693706106725 427.77560027042205 199.29479546735595 316.382332637482 376.5338886434724 224.25600559418254 296.56942919344965 379.03474975394533 415.6659246799846 0.8669510916545223 0.98557768575786 1.2229699546635595 1.029133192959612 0.4794590646822692 0.7611457034421583 0.9058570026719428 0.5395101986453043 0.7134802532148247 0.9118735196919471 1.0 8.699280673820313 -6.577418888124563 24.99980143561103 0.8076973986647076 1.038686585467414 0.3437371673827856 0.1690752838973496 96.23508390735923 44111.29356477986 0.027026007556712785 0.0562591275941195 2.645946824117003e-07 6.577418888124563 0.23098918680270653 KSPGGGGGGGSGNDNNQAATKS(ph)PR ddPTM_A549_MK2206_60min_R1 1 KSPGGGGGGGSGNDNNQAATKSPR 24 2 Q9NS37;E9PIM0;J3KN20 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 KSPGGGGGGGSGNDNNQAAT(0.281)KS(0.718)PR 49.559 0.0018920999999999999 8673800.0 345.94 402.77 251.42 452.89 558.27 342.91 423.14 324.14 446.76 516.47 797.05 True False 404.32621457903065 423.26927263023606 287.0751365742065 563.8480703310045 476.1492225357972 379.19650859476445 500.0190607871231 370.08783763711745 345.56957332911975 399.79906829600674 599.1204875390864 0.6748662798026124 0.7064843907589158 0.47916094098764705 0.9411263377873039 0.7947470207396862 0.6329219522308954 0.8345884862675508 0.6177185479956951 0.576794785884492 0.6673099595345151 1.0 9.22670235855679 -10.915776926181419 1.1586290702282025 1.0007422817759908 0.6894423825937376 0.0 0.15447801936011601 0.34823319907658495 0.8272423534448494 0.08681570912736625 0.020368733265769358 1.214012263432864e-11 10.915776926181419 -0.3112998991822532 KSPS(ph)AGDVHILTGFAK ddPTM_A549_MK2206_60min_R1 2 KSPSAGDVHILTGFAK 16 1 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 KS(0.111)PS(0.889)AGDVHILTGFAK;KS(0.433)PS(0.567)AGDVHILTGFAK 106.73 2.5235e-07 14590800.0 4307.1 3931.4 3684.5 4258.3 5634.299999999999 3939.8 3815.4 3977.3999999999996 7016.0 6283.9 6442.8 True False 5034.033181515125 4131.4914676329145 4207.017503411278 5301.58369116235 4805.501933712079 4356.707020972418 4508.608792662452 4541.208630276644 5426.887202249763 4864.362625641909 4842.874947765922 1.039472056538934 0.8531071960755093 0.868702485359864 1.0947182713458328 0.9922828868271556 0.8996117116305513 0.9309777438590128 0.9377092490012693 1.120592057565569 1.004436967319567 1.0 12.241648034955077 -8.743070800338408 24.849839945967872 1.0569462511465146 0.9496381516574219 0.21887767422651483 0.07376240117195863 215.235635347137 291180.3043485646 0.013308666829675 0.015076310913234385 1.8068795376238917e-09 8.743070800338408 -0.1073080994890927 KSPS(ph)AGDVHILTGFAK ddPTM_A549_PD325901_60min_R1 2 KSPSAGDVHILTGFAK 16 1 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 KS(0.093)PS(0.907)AGDVHILTGFAK;KS(0.088)PS(0.912)AGDVHILTGFAK 142.98 6.3229e-15 33280000.0 4542.4 4359.6 4483.0 5482.6 5785.1 5999.9 5698.799999999999 5509.3 5418.3 6196.1 6445.799999999999 True False 5003.541104061859 4726.998792017534 4787.243338468966 5821.247750111977 5378.774533511547 5951.038803660505 5915.6709525030155 5399.412689537762 5190.587693645804 5804.877188566957 5653.00746329277 0.8851113564862324 0.8361918541080691 0.8468489329891115 1.0297612001950571 0.9514890203910172 1.0527208467887177 1.0464643804056202 0.9551398480540315 0.918199335017751 1.0268652971467556 1.0 12.464802886351748 -6.247262076286863 24.864419408330644 0.97571657149743 0.854064813159139 0.637030356743866 0.04544289184822687 440.1958622771083 772022.0418083085 0.006981899729022422 0.018375632872439963 5.658976933469384e-07 6.247262076286863 -0.121651758338291 KSPS(ph)LESLSRPPSLGFGDTR ddPTM_A549_MK2206_60min_R1 2 KSPSLESLSRPPSLGFGDTR 20 2 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 KS(0.003)PS(0.983)LES(0.014)LSRPPSLGFGDTR;KS(0.003)PS(0.543)LES(0.434)LS(0.02)RPPSLGFGDTR 186.13 1.8737999999999998e-44 71778000.0 6406.1 6760.4 7023.1 6412.4 8920.4 7231.3 7178.9 6960.700000000001 10859.3 10389.8 10741.400000000001 True False 7487.293065892139 7104.475483996936 8019.081185563245 7983.438287863573 7608.220976782424 7996.511366251551 8483.213204813253 7947.400541249721 8399.685888738724 8042.73696397052 8074.013932441313 0.9273321954286287 0.8799186555092777 0.9931963522310323 0.9887818320186682 0.9423096170558566 0.9904009868154479 1.0506810213353461 0.9843184081361489 1.040335817973866 0.9961262181694879 1.0 12.979070360983439 -5.906839871707551 0.5554581296553698 1.0184566028954636 0.8711862699244689 0.529208489157541 0.03196193466679496 1.1097136136909682 0.3465875576002766 0.006039921355576549 0.09150843901084499 1.2392534262200079e-06 5.906839871707551 -0.14727033297099468 KSPS(ph)LESLSRPPSLGFGDTR ddPTM_A549_PD325901_60min_R1 4 KSPSLESLSRPPSLGFGDTR 20 2 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 KS(0.451)PS(0.533)LES(0.008)LS(0.008)RPPS(0.001)LGFGDTR;KS(0.02)PS(0.475)LES(0.359)LS(0.146)RPPSLGFGDTR;KS(0.045)PS(0.954)LES(0.001)LSRPPSLGFGDTR;KS(0.004)PS(0.987)LES(0.009)LSRPPSLGFGDTR 188.38 1.3598e-44 178787000.0 20554.6 20342.300000000003 19494.4 21760.0 25506.2 24708.3 21376.8 23088.600000000002 24641.100000000002 24512.6 26345.4 True False 22641.287860503217 22056.617012308052 20817.4072133503 23104.06577945441 23714.73250361312 24507.08379681077 22190.305821833794 22628.07976034371 23605.5202587335 22964.87025265351 23105.082817250517 0.9799267130779975 0.9546218547132984 0.9009882101702655 0.9999559820752796 1.0263859554706911 1.0606793314981542 0.960407975913692 0.9793550596342951 1.0216591927170826 0.9939315272874796 1.0 14.495922640221284 -6.424030244073406 7.902548256127988 1.0092020829586472 0.9463150281489261 0.44087261917555354 0.030069495384154647 0.19437270796735537 13.94174599598184 0.00415502296903606 0.009678660370329738 3.766775664133167e-07 6.424030244073406 -0.06288705480972112 KSPSDT(ph)EGLVK ddPTM_A549_PD325901_60min_R1 1 KSPSDTEGLVK 11 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 KS(0.083)PS(0.037)DT(0.88)EGLVK 75.819 0.0039559 11587000.0 1674.4 1867.7 2186.5 2133.2 2290.6 2245.0 2387.8 2407.6 1740.6 2375.4 2554.9 True False 1844.3838553718688 2025.0976336937206 2334.889038492613 2264.9629191512918 2129.71615814101 2226.7174643273784 2478.6690356542954 2359.5785292743385 1667.44863509955 2225.416838611699 2240.6634968454982 0.8231418318584969 0.9037937363395885 1.0420525178277638 1.0108447441304789 0.9504846047339618 0.9937759362181097 1.106221009600001 1.053071348105708 0.7441762841439848 0.9931954716737859 1.0 11.129710285636898 -8.734819191357666 24.99993039588304 0.8791942830102111 0.9885776468940064 0.07374399806759302 0.0968646836693469 302.4922350256946 284080.7471409834 0.019574411831873733 0.022192180665824044 1.8415385246289359e-09 8.734819191357666 0.10938336388379533 KSPSGPVKS(ph)PPLSPVGTTPVK ddPTM_A549_MK2206_60min_R1 1 KSPSGPVKSPPLSPVGTTPVK 21 2 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 1 KS(0.077)PS(0.077)GPVKS(0.833)PPLS(0.012)PVGTTPVK 85.84899999999999 5.3035e-06 21463000.0 2184.5 2846.0 2576.6 2141.4 3181.6 2493.9 1902.8 2525.9 3276.1 3089.5 3095.0 True False 2553.190194102712 2990.8492437511513 2942.0006240438343 2666.0430961310976 2713.5908546400346 2757.8028426831593 2248.5141297578534 2883.954060244323 2534.0685808566777 2391.579804249061 2326.426082345491 1.0974731643004099 1.2855982257281917 1.264600945789657 1.145982292909649 1.1664204056310294 1.1854246578523382 0.9665100244624634 1.239649985928947 1.0892538559840435 1.0280059282338694 1.0 11.183899633662373 -8.781888328806305 0.22245256706402303 0.9558195636115531 1.253360951282121 0.37766309727000025 0.0808775649862978 1.4378197648266775 0.28197532908181494 0.15620261303701483 0.1391988897488551 1.6523866257898482e-09 8.781888328806305 0.29754138767056804 KSPVGKS(ph)PPSTGSTYGSSQK ddPTM_A549_MK2206_60min_R1 2 KSPVGKSPPSTGSTYGSSQK 20 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(0.012)PVGKS(0.452)PPS(0.45)T(0.085)GS(0.001)TYGSSQK;KS(0.009)PVGKS(0.786)PPS(0.191)T(0.012)GS(0.002)TYGSSQK 142.4 1.6194000000000002e-21 87177000.0 5418.299999999999 5803.8 5556.4 4608.6 8304.5 6897.1 5548.5 6430.8 10161.4 8653.599999999999 8423.400000000001 True False 6332.776575283461 6099.188629965893 6344.381070960624 5737.707206887919 7082.919050904633 7626.94654407555 6556.590629052687 7342.385593499026 7859.859124421435 6698.745749813787 6331.637305986757 1.0001799328106848 0.9632877461567362 1.0020127124088136 0.9061964432900698 1.1186552085362684 1.2045772958068899 1.0355284600482768 1.159634584020878 1.2413628173221003 1.0579800178193906 1.0 12.628362900869842 -6.778328729285021 24.211224721869954 1.1211434438777008 0.9700236586664158 0.5060174016891785 0.07067784671037468 134.20455062324308 192384.954905487 0.013578875287003987 0.025715072089891423 1.6659857053626722e-07 6.778328729285021 -0.151119785211285 KSPVGKS(ph)PPSTGSTYGSSQK ddPTM_A549_PD325901_60min_R1 2 KSPVGKSPPSTGSTYGSSQK 20 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(0.011)PVGKS(0.888)PPS(0.099)T(0.002)GSTYGSSQK;KS(0.095)PVGKS(0.889)PPS(0.007)T(0.007)GS(0.001)TYGSSQK 227.24 8.475299999999999e-76 60181400.0 8265.9 8452.210000000001 8446.42 8068.41 9743.86 8950.28 9172.609999999999 9805.22 8514.1 9629.05 10240.859999999999 True False 9105.048082966032 9164.507399733571 9019.644853649566 8566.777361011384 9059.484888092147 8877.391887135875 9521.678692994787 9609.647195053716 8156.281985580302 9021.070139696047 8981.299142160233 1.0137785123117538 1.0203988593045874 1.0042695061017766 0.9538461224164118 1.0087053938071044 0.9884307099251829 1.0601671921045244 1.0699618221092178 0.9081405547770794 1.0044282009658403 1.0 13.132708430117312 -8.76659708782485 24.999999883828433 0.9566219329479125 1.0131497370888811 0.18179866604097894 0.038417931548383466 130.45838042319102 632344.7241400675 0.007668808404947792 0.0082849593858391 1.7116025000937944e-09 8.76659708782485 0.056527804140968585 KSPVGKS(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_A549_PD325901_60min_R1 1 KSPVGKSPPSTGSTYGSSQKEESAASGGAAYTK 33 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(0.213)PVGKS(0.516)PPS(0.043)T(0.043)GS(0.043)T(0.043)Y(0.04)GS(0.026)S(0.026)QKEES(0.007)AAS(0.001)GGAAYTK 45.325 0.0060476 4476100.0 516.73 503.92 314.75 631.35 702.99 710.19 717.89 753.31 753.41 553.31 1171.5 True False 569.1880492034796 546.3871069073937 336.1108277455066 670.3470556001165 653.6144075838416 704.4064481027444 745.2096967944817 738.2846410897371 721.7467977538504 518.3739121715245 1027.4129267503624 0.5540012534237649 0.5318086746636322 0.32714288383406115 0.652461184930171 0.6361749892043697 0.6856118214618288 0.7253263779262829 0.7185860931542699 0.7024895044261188 0.5045429142215546 1.0 10.00480041533941 -14.999999999576822 0.07016303982998043 2.426647072360932 0.10130665101491929 0.0 0.16490477102440293 59.24613654399994 0.3109686249328668 13.659354139296552 1.8326161912791585 1.0000000009744032e-15 14.999999999576822 -2.3253404213460125 KSPVGKSPPS(ph)TGSTYGSSQKEESAASGGAAYTK ddPTM_A549_MK2206_60min_R1 1 KSPVGKSPPSTGSTYGSSQKEESAASGGAAYTK 33 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(0.019)PVGKS(0.019)PPS(0.192)T(0.192)GS(0.192)T(0.192)Y(0.176)GS(0.009)S(0.009)QKEES(0.002)AASGGAAYTK 58.137 0.00043841 17218000.0 497.29 388.84 247.85 463.59 537.59 182.93 391.58 349.47 587.88 637.9 493.9 True False 581.2203944267965 408.63029513007655 282.9988568925187 577.1695708113458 458.5112231411669 202.2875311808936 462.7250173063801 399.0084427069893 454.7261186514526 493.7979469592094 371.25099905345303 1.5655726069658653 1.10068470164909 0.7622844318643094 1.5546613269268117 1.2350437421318563 0.5448807725680169 1.2463939989014186 1.0747673237898538 1.2248482019195341 1.330091900676911 1.0 8.536251098051826 -5.262250411219178 8.307186124867668 1.0939822228917686 1.5686866608305021 0.20158978930997518 0.2609382818009042 0.09598233545775346 95.54351155679977 0.03235148855096317 0.2596889208637343 5.467006481549728e-06 5.262250411219178 0.4747044379387335 KSPVGKSPPST(ph)GSTYGSSQK ddPTM_A549_PD325901_60min_R1 1 KSPVGKSPPSTGSTYGSSQK 20 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(0.005)PVGKS(0.369)PPS(0.239)T(0.385)GS(0.001)TYGSSQK 190.37 1.5219999999999998e-44 65297000.0 5186.0 5762.3 6110.0 6090.0 6384.1 5885.4 6608.7 6381.3 6012.5 6148.9 6038.9 True False 5712.478902268577 6247.909243793605 6524.661342414759 6466.16546860649 5935.702839949366 5837.47125369815 6860.197694919403 6254.019965466996 5759.815534031968 5760.657404622163 5296.153583741152 1.0786089964999348 1.1797069599669996 1.231962260770731 1.2209172876816108 1.1207573092614966 1.102209586900729 1.2953169855156326 1.180860763680727 1.0875469230564287 1.087705881926651 1.0 12.37072924428625 -9.190283811579553 1.309332075808352 1.024862625029436 1.1788187262771352 0.38885103334350424 0.06361475413837382 0.21603991531241626 0.7667817301903956 0.014210479388768626 0.01267592788333926 6.452324316317236e-10 9.190283811579553 0.15395610124769932 KSQSPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 KSQSPSPK 8 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 KS(0.196)QS(0.329)PS(0.475)PK 51.092 0.01252 3881100.0 1998.7 1959.6 2273.7 1915.8 2416.0 2086.6 1597.0 1648.2 2836.3 3343.8 3266.2 True False 2336.0316964765802 2059.3352698716626 2596.1448493706675 2385.1710860035305 2060.6096004558467 2307.4026270270174 1887.154228097169 1881.837397400806 2193.882578640396 2588.4332576300435 2455.112397465861 0.9514968434389423 0.8387947012109446 1.0574443972709269 0.9715119716985166 0.8393137530415246 0.9398358418981926 0.7686630681532415 0.766497452150548 0.8935976132517992 1.0543033631787266 1.0 11.261573358715186 -4.29153783551179 16.601041256986544 0.9215807692727179 0.9134546348548622 0.0 0.09898771404503837 0.0 0.0 0.012764359599106217 0.0 5.110485548108281e-05 4.29153783551179 -0.008126134417855702 KSRVS(ph)VS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 KSRVSVSPGR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KS(0.036)RVS(0.966)VS(0.999)PGR 47.621 0.010373 8348700.0 1780.2 1787.3 1701.4 1401.9 2116.5 1689.3 1792.3 1995.2 2011.3 1770.1 1895.0 True False 1960.9245934860248 1937.9220435298953 1816.8672353493396 1488.4921790540955 1967.844341528616 1675.5429008856302 1860.5069572841933 1955.4041707958786 1926.7720554841571 1658.3355839128435 1661.9270133947389 1.1799101751649959 1.1660692845779037 1.0932292577867855 0.8956423278863634 1.1840738646572657 1.0081928312020627 1.119487764678561 1.1765884753276066 1.1593602125453344 0.9978389968675223 1.0 10.698641309534729 -10.964161356970154 1.2641693412985355 1.0007196506206084 1.1107534115305928 0.20344105327211326 0.08379374865757691 0.6177023363588084 1.7739897048742348 0.057462170256412405 0.01369279055522538 1.0860220500224077e-11 10.964161356970154 0.1100337609099844 KSS(ph)ADTEFSDECTTAER ddPTM_A549_MK2206_60min_R1 2 KSSADTEFSDECTTAER 17 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 KS(0.004)S(0.991)ADT(0.004)EFSDECTTAER;KS(0.002)S(0.993)ADT(0.005)EFSDECTTAER 263.16 4.049799999999999e-100 79460000.0 13885.599999999999 15110.3 12411.4 10237.0 14508.2 11316.7 9811.3 10416.6 14055.900000000001 12766.3 13099.8 True False 16229.149809673892 15879.349728690444 14171.52314882311 12745.065459556386 12374.062998896323 12514.225682582513 11593.886210475735 11893.184949499595 10872.261092659995 9882.383963419581 9846.758123912587 1.648171876006768 1.6126474854833563 1.4392069928485343 1.2943412744754377 1.2566636494143433 1.2708980483832597 1.1774318069538334 1.2078274696945501 1.1041462536037117 1.003618027279504 1.0 13.265433104826295 -2.000000000000001 0.19989285278746194 0.9810264479364953 4.4213965308144 0.9641099577374228 0.039302801000584205 5.676773468205665 0.06307053485818999 0.031992843935153246 6.194439995811529 0.00999999999999998 2.000000000000001 3.4403700828779047 KSS(ph)AELKK ddPTM_A549_MK2206_60min_R1 2 KSSAELKK 8 2 H7BZL1;A0A087WWX7;Q13163-4;Q13163-2;Q13163-3;Q13163 H7BZL1 MAP2K5 Dual specificity mitogen-activated protein kinase kinase 5 1 KS(0.04)S(0.96)AELKK;KS(0.086)S(0.914)AELKK 76.143 0.0009670999999999999 61359000.0 19470.1 14719.5 11499.4 9231.5 15850.9 14675.7 14626.099999999999 15113.4 13852.1 23713.5 23750.1 True False 22756.176881757467 15468.659677932208 13130.187835181894 11493.21791441779 13519.253607560266 16228.672833058761 17283.473046695042 17255.770732846348 10714.621467258266 18356.60388025899 17852.294700585986 1.27469198013018 0.8664801885342204 0.7354902019823204 0.6437949914663091 0.7572838021274939 0.9090524834617518 0.9681373367720468 0.966585585901175 0.6001817495711949 1.0282489835694035 1.0 14.123821907046427 KSS(ph)AELKK ddPTM_A549_PD325901_60min_R1 4 KSSAELKK 8 2 H7BZL1;A0A087WWX7;Q13163-4;Q13163-2;Q13163-3;Q13163 H7BZL1 MAP2K5 Dual specificity mitogen-activated protein kinase kinase 5 1 KS(0.291)S(0.709)AELKK;KS(0.001)S(0.999)AELKK;KS(0.014)S(0.986)AELKK;KS(0.131)S(0.869)AELKK 84.17 0.00066017 158310000.0 31777.9 33524.9 25729.300000000003 25886.600000000002 31028.7 25790.3 21173.1 23435.6 25484.8 37965.9 48558.200000000004 True False 35003.96901434644 36350.160978646774 27475.445020849766 27485.55648926581 28849.351155203847 25580.272347546714 21978.853906864893 22968.158573127468 24413.762481779268 35568.726594698994 42585.84923579124 0.821962450966632 0.8535737018506211 0.6451778117355953 0.6454152490204563 0.6774398461674315 0.6006754075963758 0.5161069768779621 0.5393378078703172 0.5732834479031768 0.8352240763771194 1.0 15.378086499464372 -10.771750366605406 1.0285925392436839 0.9993115188649171 0.6470332787134244 0.4410735417896082 0.11014989562223512 0.3042349137472265 0.573307464947345 0.0770075880629134 0.019656268712818465 1.6914128800088962e-11 10.771750366605406 -0.35227824015149267 KSS(ph)GTGTEPVAK ddPTM_A549_PD325901_60min_R1 1 KSSGTGTEPVAK 12 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 KS(0.078)S(0.751)GT(0.166)GT(0.005)EPVAK 97.76700000000001 0.00010578 17446000.0 3430.2 2804.3 2343.7 3205.6 3482.6 3034.6 2665.4 3139.8 3265.2 3578.1 4248.8 True False 3778.431378820223 3040.628202691705 2502.7575758130065 3403.6026315541812 3237.9941903177705 3009.8872237184232 2766.8332555628454 3077.1742258745494 3127.974999038866 3352.1781553576357 3726.224535362302 1.014010654205744 0.8160077778018452 0.671660430567602 0.9134185552302602 0.8689745235663688 0.8077578780221764 0.7425299332622813 0.8258155665800088 0.8394488762966432 0.899617863482213 1.0 11.863498895681737 -10.41849033406969 0.7474176039909145 1.001690413741916 0.827287477885013 0.17609619413188327 0.08783946718572726 0.5791089482976655 0.5805830048708566 0.05690448310693269 0.01636435390278349 3.81513285383851e-11 10.41849033406969 -0.17440293585690303 KSS(ph)IGCSTNTK ddPTM_A549_PD325901_60min_R1 1 KSSIGCSTNTK 11 1 Q8IYT2 Q8IYT2 CMTR2 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 2 1 KS(0.189)S(0.809)IGCS(0.001)TNTK 58.07899999999999 0.0050383 5056600.0 2591.1 2533.6 2394.8 2783.6 2885.0 2785.4 2925.0 2904.8 2872.5 2685.7 3101.4 True False 2854.1465645329954 2747.1153636699746 2557.3255291022697 2955.536649985718 2682.3675527096902 2762.7166258964257 3036.3124756214174 2846.861485228485 2751.7788143878274 2516.1244436555708 2719.9474613944294 1.0493388585784544 1.009988392298437 0.9402113700355121 1.0866153453091 0.9861835902280726 1.015724261262043 1.1163129136563534 1.0466604688639798 1.0117029293562454 0.9250636195618407 1.0 11.409363069256173 -4.971204376650701 16.45565471722236 1.0161631903762016 1.148054294373391 0.03379205873518254 0.05326572166788661 5735127.666486187 88212814.31874216 0.006077941976340333 20877655.681579474 1.0685519060956197e-05 4.971204376650701 0.13189110399718929 KSS(ph)ISSISGR ddPTM_A549_MK2206_60min_R1 3 KSSISSISGR 10 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KS(0.033)S(0.898)IS(0.068)S(0.001)ISGR;KS(0.008)S(0.99)IS(0.001)SISGR;KS(0.161)S(0.833)IS(0.004)S(0.001)ISGR 113.54 4.3886000000000006e-05 56432500.0 9843.800000000001 10741.199999999999 9604.2 8435.0 12684.599999999999 10149.3 10355.2 11031.2 13677.3 15435.3 14073.199999999999 True False 11505.192782196504 11287.881200625388 10966.21997727306 10501.57537866154 10818.712143188017 11223.29218943991 12236.605800120105 12594.90638163315 10579.413388160025 11948.455009718573 10578.436039439275 1.0876081057069333 1.0670652219799892 1.0366579649759209 0.9927342132153395 1.022713764383783 1.0609594979443497 1.1567499916338033 1.190620837964698 1.0000923906631478 1.1295105406103034 1.0 13.368838728652742 KSS(ph)ISSISGR ddPTM_A549_PD325901_60min_R1 3 KSSISSISGR 10 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KS(0.012)S(0.844)IS(0.143)SISGR;KS(0.014)S(0.846)IS(0.14)S(0.001)ISGR;KS(0.059)S(0.921)IS(0.016)S(0.004)ISGR 136.24 2.3135000000000002e-07 61230500.0 10797.900000000001 11186.6 11122.8 10416.5 12111.1 10986.5 12133.300000000001 12031.2 14333.800000000001 14660.900000000001 14856.5 True False 11894.094859006158 12129.334041376109 11877.660094829931 11059.903547412077 11260.4581170268 10897.029586562465 12595.039371096522 11791.228277706188 13731.400233132199 13735.20827195516 13029.244683112896 0.9128767743860089 0.9309314804024553 0.9116153993350417 0.848852240970402 0.8642448883949039 0.8363515960895278 0.9666745599935548 0.9049817210807859 1.0538907332770686 1.054183001855607 1.0 13.669465831566631 -8.745864346727432 16.51905686959198 1.0254482355243588 0.8962730187950957 0.7244867356593252 0.03800942996162263 1.8594884635053064 1971.6700219974427 0.006922748361874513 0.00780704573449562 1.795294305190097e-09 8.745864346727432 -0.12917521672926313 KSS(ph)LVTSK ddPTM_A549_MK2206_60min_R1 2 KSSLVTSK 8 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 KS(0.03)S(0.969)LVT(0.001)SK;KS(0.006)S(0.994)LVTSK 105.46 0.0015932000000000001 14697500.0 4139.9 4369.4 5410.7 4323.9 7095.7 4047.1 4383.0 4087.6000000000004 7252.4 7091.5 6076.0 True False 4838.613909162651 4591.783796783651 6178.018620086151 5383.255694107247 6051.931929616951 4475.361435752443 5179.334365529046 4667.02981774999 5609.742979702991 5489.525224739351 4567.161510930923 1.0594356905447817 1.005391157241494 1.3527042136127319 1.1786873928638402 1.3250969809437256 0.9798999717967564 1.1340379255546285 1.021866602829798 1.2282777752170098 1.2019555716610562 1.0 12.15708209406283 -7.271520210098166 24.99760628817643 1.0973399621466569 1.1833738410978634 0.12482231932850452 0.1184053232576362 1349.0050555047671 3345147.1536694635 0.019038826905701287 0.030659483589583952 5.351552494903574e-08 7.271520210098166 0.08603387895120651 KSS(ph)LVTSK ddPTM_A549_PD325901_60min_R1 3 KSSLVTSK 8 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 KS(0.019)S(0.981)LVTSK;KS(0.033)S(0.893)LVT(0.025)S(0.048)K;KS(0.041)S(0.956)LVT(0.004)SK 105.03 0.0011023 149233000.0 15959.6 15592.099999999999 14570.0 13492.8 19702.399999999998 18193.5 19424.0 18062.5 19665.6 17584.6 15545.4 True False 17579.80684316344 16906.100987479702 15558.807816527495 14326.219611627863 18318.571393590064 18045.33816803569 20163.190949220632 17702.22926774286 18839.123220966154 16474.305354993387 13633.414350409805 1.2894647218460729 1.240048938068953 1.1412260653590283 1.0508167098432855 1.3436525086644513 1.3236110708755264 1.478953872520903 1.2984443084289263 1.3818345673913939 1.2083770749986915 1.0 13.734859295290219 -10.884198426579674 1.1346503521971356 1.0000820842371982 1.2874685609643761 0.1756592948755139 0.12356109931427876 0.37286825881605157 0.8527209998438914 0.0838896735530661 0.02018741915825922 1.3055742426920883e-11 10.884198426579674 0.2873864767271779 KSS(ph)PEMEDAR ddPTM_A549_MK2206_60min_R1 1 KSSPEMEDAR 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 KS(0.006)S(0.994)PEMEDAR 107.99 0.00010524 25151000.0 7834.3 8743.4 6507.8 6602.4 9778.6 7580.4 8200.9 6559.0 10645.0 11905.0 11938.0 True False 9156.538309754571 9188.40171391912 7430.703897055208 8219.988296392998 8340.180893633093 8382.552896537718 9690.897375830982 7488.758336095059 8233.924496571944 9215.65223161841 8973.465127961377 1.0204016151155184 1.0239524623869098 0.8280751962696199 0.9160327899174043 0.9294270133891793 0.934148935444974 1.079950413540259 0.834544763846024 0.917585835477867 1.02698925110907 1.0 13.131449478010548 KSS(ph)PEMEDAR ddPTM_A549_PD325901_60min_R1 5 KSSPEMEDAR 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 KS(0.125)S(0.875)PEMEDAR;KS(0.035)S(0.965)PEMEDAR;KS(0.06)S(0.94)PEMEDAR;KS(0.158)S(0.842)PEMEDAR;KS(0.218)S(0.782)PEMEDAR 94.023 0.00024547 179119000.0 23815.0 24324.299999999996 23379.300000000003 21800.8 27163.2 24102.000000000004 22521.100000000002 25741.5 24929.2 27047.2 28153.6 True False 26232.68126832361 26374.194127138264 24965.95988915179 23147.385902790866 25255.3505399528 23905.72130299264 23378.152784518796 25228.0655886839 23881.51241762821 25339.435176095973 24690.885680374715 1.0624439158605952 1.06817529628358 1.011140718576803 0.9374870631388211 1.0228612641476342 0.9682002343882643 0.94683330064181 1.021756202481475 0.9672197557745033 1.0262667570583242 1.0 14.591690967499035 -5.885402279462206 3.981143196176949 0.9829786959626229 1.0653028783303926 0.5173674211938881 0.02893513097323812 0.1023246761265688 2.9590980257403285 0.0034094696074123904 0.011801625391374118 1.3019602365051943e-06 5.885402279462206 0.08232418236776973 KSS(ph)PFK ddPTM_A549_MK2206_60min_R1 1 KSSPFK 6 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 KS(0.18)S(0.82)PFK 48.56100000000001 0.04311 2541400.0 1978.6 2339.3 1867.0 1933.2 2535.5 2119.7 2556.3 1967.0 2718.2 2710.9 2844.2 True False 2312.539307874398 2458.3603780418375 2131.7686738686007 2406.8340867846464 2162.5313087565396 2344.005247057017 3020.7466207168404 2245.828273684859 2102.5320400734486 2098.5058071981807 2137.906644073358 1.0816839520496144 1.1498913597826321 0.9971289811827037 1.1257900776242036 1.011518119723069 1.0964020592550192 1.4129459904579393 1.0504800478125076 0.9834536254901616 0.9815703660473654 1.0 11.061983140960441 -8.51846340171375 24.96647384875744 0.9934906536586083 1.123937074654594 0.25769770699033545 0.10258045010101943 193.61308079276634 1094785.929316317 0.017110892532591584 0.0196448869568954 3.0306556824073815e-09 8.51846340171375 0.1304464209959857 KSS(ph)PFK ddPTM_A549_PD325901_60min_R1 1 KSSPFK 6 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 KS(0.146)S(0.854)PFK 55.531000000000006 0.033201999999999995 4182900.0 4662.6 4698.7 4718.5 3876.0 5358.3 4606.7 3972.1 4118.7 4791.9 4521.9 4961.9 True False 5135.943719575298 5094.675939089083 5038.725784645505 4115.411716965313 4981.951493131483 4569.1845625465185 4123.260439116521 4036.5492974423573 4590.513107281127 4236.386462287717 4351.617756075648 1.1802377891313154 1.170754469869508 1.157897147011713 0.9457199477641278 1.1448504377885156 1.049996764115393 0.9475235809394568 0.9275973956597181 1.0548980550674374 0.9735198953016848 1.0 12.087336121205897 -6.168406164448196 6.850555088468144 1.0198164946403498 1.1719199162764762 0.5903215125771688 0.06007793822501056 0.1436915742530443 9.07849186746417 0.008242899127099046 0.022038500269011246 6.785687191646535e-07 6.168406164448196 0.15210342163612633 KSS(ph)PFKDLMTVPESR ddPTM_A549_PD325901_60min_R1 1 KSSPFKDLMTVPESR 15 2 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 KS(0.223)S(0.719)PFKDLMT(0.057)VPESR 54.668 0.0059784999999999994 17296000.0 5315.6 5086.5 4932.8 5334.9 7316.5 6987.6 5736.2 6974.7 7573.7 5738.7 6013.9 True False 5855.235798862104 5515.157206073306 5267.569471336092 5664.424656563019 6802.614280554748 6930.695302331399 5954.494229969084 6835.584136953698 7255.40372725121 5376.357502627328 5274.228425253099 1.1101596910037366 1.0456803841992577 0.9987374543952013 1.073981670843389 1.2897837810709354 1.3140680955620176 1.1289792079271463 1.2960349051673228 1.375633200206538 1.0193637948795 1.0 12.364744339907686 -6.630667572110558 7.046101520223503 1.203444270527313 1.048728619425656 0.27393810532220875 0.11484745703976093 0.28510952935029893 16.851394214542484 0.020915124848785317 0.043721678981714286 2.340628171769231e-07 6.630667572110558 -0.15471565110165697 KSS(ph)PQSTDTAMDLLK ddPTM_A549_MK2206_60min_R1 1 KSSPQSTDTAMDLLK 15 1 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 KS(0.436)S(0.556)PQS(0.005)T(0.004)DTAMDLLK 60.56399999999999 0.0063887 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSS(ph)PSKDR ddPTM_A549_PD325901_60min_R1 2 KSSPSKDR 8 2 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 KS(0.096)S(0.793)PS(0.111)KDR;KS(0.139)S(0.689)PS(0.172)KDR 64.73 0.001907 40940000.0 7072.299999999999 6703.799999999999 6187.200000000001 5446.3 5526.7 4111.0 3907.6 3975.7 4355.3 6609.200000000001 7866.299999999999 True False 7790.274689647913 7268.752752988143 6607.1005986560685 5782.705581555262 5138.523658079942 4077.521378997708 4056.3058563207646 3896.4015446236835 4172.261886963732 6191.893984066875 6898.794968584187 1.129222527285324 1.0536264356440037 0.9577180694227848 0.8382196612435381 0.7448436547947592 0.5910483493952164 0.5879730988951575 0.5647945130080199 0.6047812561416054 0.8975326868335115 1.0 12.752128669064122 -6.086681252645245 1.5710935973960112 0.7525581063672192 1.1109557811689244 0.5471395492669177 0.13321127337505245 0.3697180541407424 1.6646261241505431 0.026892488783568334 0.1241757046075022 8.190657150571233e-07 6.086681252645245 0.35839767480170515 KSS(ph)PSSPAVR ddPTM_A549_PD325901_60min_R1 1 KSSPSSPAVR 10 1 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 KS(0.091)S(0.497)PS(0.347)S(0.065)PAVR 55.31399999999999 0.019528 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSS(ph)PSTGSLDSGNESK ddPTM_A549_MK2206_60min_R1 1 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 KS(0.412)S(0.571)PS(0.017)TGSLDSGNESK 83.77600000000001 6.009e-05 5211000.0 1539.4 1343.2 1952.6 1449.7 1916.3 1744.8 1653.5 1346.6 2501.1 2244.7 2893.5 True False 1799.2130852834584 1411.5631427289343 2229.5080410261535 1804.8765650795067 1634.4148085072595 1929.4335778954965 1953.919546749324 1537.4846737895423 1934.604843435987 1737.6207109881432 2174.9640934625772 0.8272380636956093 0.6490052626485908 1.0250780910487314 0.8298420054402437 0.7514674901622147 0.8871105429716808 0.8983686455433171 0.7069011752473773 0.8894881755753795 0.7989192631781905 1.0 11.086775868331005 -9.747029762888042 0.7720971380987414 0.9895714272711892 0.8245244032077825 0.0 0.11238335305619014 0.49692866900102245 0.6232557842617962 0.03738247357436379 0.02026541610727754 1.7904831451875517e-10 9.747029762888042 -0.16504702406340666 KSS(ph)PSTGSLDSGNESK ddPTM_A549_PD325901_60min_R1 2 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 KS(0.051)S(0.939)PS(0.005)T(0.006)GSLDSGNESK;KS(0.179)S(0.82)PS(0.001)TGSLDSGNESK 180.8 1.8993e-30 50922000.0 12447.8 12675.0 12166.5 12650.1 17233.9 13628.3 13390.7 13909.2 14171.8 15947.8 15624.2 True False 13711.49149241397 13743.166732916365 12992.191853107875 13431.467946538414 16023.450317727393 13517.315643248463 13900.2904161722 13631.77009444368 13576.208529762038 14940.853186331427 13702.522449964159 1.0006545541145846 1.0029661898457471 0.9481605960179877 0.9802186419022102 1.169379607020407 0.9864837436032677 1.0144329605684068 0.9948365451851047 0.9907817031015007 1.0903724654266491 1.0 13.742153877923322 -8.111855671170652 2.4025261023042135 0.9954587286074145 1.0160133634994666 0.0 0.060108912984473024 1.043011559163245 11.826171764513433 0.008821471192967698 0.011822695968730475 7.729374122526422e-09 8.111855671170652 0.020554634892052115 KSS(ph)PSVKPAVDPAAAK ddPTM_A549_MK2206_60min_R1 1 KSSPSVKPAVDPAAAK 16 2 H3BV90;Q6FI81-3;Q6FI81;H3BT65;H3BPG7 H3BV90 CIAPIN1 Anamorsin 1 KS(0.287)S(0.708)PS(0.005)VKPAVDPAAAK 156.05 6.7428e-21 272720000.0 13135.0 13711.0 14806.0 13267.0 19795.0 14935.0 14085.0 14356.0 20358.0 20117.0 20777.0 True False 15351.86688008199 14408.83133558399 16905.713436153463 16517.41559557827 16883.18172227794 16515.411786949357 16644.06218080691 16391.006963406122 15746.945505045724 15572.555728136724 15617.49748397166 0.9829914745200191 0.9226082059799828 1.0824854272269875 1.0576224271865708 1.0810427047998734 1.0574941218270875 1.0657317023991086 1.0495283882855317 1.008288653236981 0.9971223458892143 1.0 13.930875677030151 -3.665970570394285 7.3960196618145035 1.020062089598718 0.7777199241949762 0.0 0.047977308855894685 0.0 0.0 0.006602671183053331 0.0 0.00021578906318689468 3.665970570394285 -0.24234216540374187 KSS(ph)PSVKPAVDPAAAK ddPTM_A549_PD325901_60min_R1 1 KSSPSVKPAVDPAAAK 16 2 H3BV90;Q6FI81-3;Q6FI81;H3BT65;H3BPG7 H3BV90 CIAPIN1 Anamorsin 1 KS(0.084)S(0.892)PS(0.023)VKPAVDPAAAK 132.76 7.281e-11 441530000.0 6665.5 6738.6 7392.1 6725.1 8393.5 6909.4 8208.6 8102.8 6858.4 6950.8 8174.5 True False 7342.1766531182475 7306.485471118756 7893.7723583083725 7140.494153189742 7803.969516003042 6853.1321372042685 8520.98276491827 7941.183297476368 6570.165298728457 6511.925301769052 7169.088322424959 1.0241437018082016 1.0191652191344913 1.101084545662047 0.9960114636688497 1.0885581492408414 0.9559279826093957 1.1885727140875884 1.1076977908943164 0.916457574971832 0.9083338088330846 1.0 12.807573950821755 -8.762786894767592 24.998797105072633 0.96054941007644 1.0597601595150636 0.39445033645271876 0.06425527645509901 30.40104550570889 563990.7759064634 0.011003224189661149 0.01202858318301854 1.7266849562517413e-09 8.762786894767592 0.09921074943862362 KSS(ph)SLESLQTAVAEVR ddPTM_A549_MK2206_60min_R1 1 KSSSLESLQTAVAEVR 16 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 KS(0.098)S(0.451)S(0.451)LESLQTAVAEVR 112.58 1.2222999999999998e-07 3564500.0 1589.4 1575.8 1717.5 1030.8 1828.6 1340.5 1190.6 1791.3 1739.1 1829.7 1896.0 True False 1857.6518629008235 1656.0014892140075 1961.0673258539493 1283.34604627437 1559.6153623317732 1482.3508202481153 1406.9166086239752 2045.2222606261769 1345.19662677203 1416.369499218161 1425.170873062051 1.3034590434125035 1.1619669756904345 1.3760225969539344 0.9004857386097408 1.0943356981334185 1.0401214677249264 0.9871915257439583 1.435071610909304 0.9438844507689156 0.9938243378318702 1.0 10.476919188459004 -2.0000000000286366 0.219629978491627 0.9716712763302535 2.7093964856069963 0.18885693217619004 0.15689035062545845 45.57521378054156 0.528747640855194 0.09728122027635956 28.457337107628412 0.009999999999340616 2.0000000000286366 1.7377252092767428 KSS(ph)SYSSSSTTVK ddPTM_A549_PD325901_60min_R1 2 KSSSYSSSSTTVK 13 1 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 KS(0.019)S(0.966)S(0.012)YS(0.003)SSSTTVK;KS(0.076)S(0.879)S(0.027)Y(0.001)S(0.013)S(0.002)SSTTVK 132.86 2.6203e-08 7838400.0 2414.12 3144.1000000000004 2688.19 2614.25 3207.5 2781.7200000000003 2852.2 2431.55 2768.81 3183.8 3279.7 True False 2659.199685218787 3409.0643412199115 2870.626738799661 2775.7262851074756 2982.216265274291 2759.066594596325 2960.7420317837264 2383.0508277359254 2652.4465444961397 2982.774324649292 2876.3176917312535 0.9245152901097712 1.1852182917833385 0.9980214449370621 0.9650277134153314 1.0368174120151856 0.9592356930974635 1.0293515352268539 0.8285075166024407 0.9221674476784357 1.0370114306997715 1.0 11.490007316132164 -6.802158345604227 0.9436491497688088 0.9554150024518474 1.047213589248479 0.10690904592971062 0.0809761853388868 0.7807588295436559 1.3135559354162865 0.012507747733119424 0.04186484726880231 1.5770361708086503e-07 6.802158345604227 0.09179858679663166 KSS(ph)TPEEVK ddPTM_A549_MK2206_60min_R1 1 KSSTPEEVK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 KS(0.007)S(0.964)T(0.028)PEEVK 82.85 0.00061908 15762000.0 4939.8 4047.3 4246.8 3281.3 3748.3 2888.2 2691.9 2934.9 3803.9 4086.7 4606.8 True False 5773.517473485271 4253.29028258399 4849.06009865301 4085.2186473031556 3196.930035342986 3193.827406968003 3180.98338548201 3350.9310627542914 2942.322723580087 3163.5116316635826 3462.804418788113 1.6672952830254977 1.2282790964187709 1.4003274549216524 1.1797428191837849 0.9232199248670891 0.9223239376845186 0.9186147990983757 0.9676928458832873 0.8496935915918172 0.9135692488144408 1.0 11.757725190241489 -6.1291879274693954 0.907113692159405 0.9234121812293846 1.5756251212901078 0.8450777566883529 0.0959695523683175 0.24156490062521713 0.2936284089132751 0.015390177181547022 0.11516664105328332 7.426976889596471e-07 6.1291879274693954 0.6522129400607232 KSS(ph)TPEEVK ddPTM_A549_PD325901_60min_R1 2 KSSTPEEVK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 KSS(0.5)T(0.5)PEEVK;KS(0.082)S(0.737)T(0.182)PEEVK 140.0 1.7389000000000002e-05 772460000.0 20514.2 20661.9 20402.3 21638.3 22597.0 19328.8 18760.6 18917.1 19581.1 19040.0 21270.9 True False 22596.786482244148 22403.15082594435 21786.922766996508 22974.84864685514 21009.864675417957 19171.392661243226 19474.544899194232 18539.78360032213 18758.174462109495 17837.811150613277 18654.71414734467 1.2113177561319317 1.2009377709565834 1.1679044017995674 1.2315840631696517 1.1262496176286099 1.0276969408278014 1.0439476448351934 0.9938390614771816 1.0055460680848627 0.9562092996826932 1.0 14.187252632957001 -7.156456047423425 2.018340593947026 1.0048555851229513 1.201488346667521 0.9347869547869299 0.024684601328617006 0.04395451141425075 0.3499497189387127 0.0028741316539128963 0.00551026580993918 6.974995834396412e-08 7.156456047423425 0.19663276154456977 KSS(ph)TPEEVKK ddPTM_A549_PD325901_60min_R1 1 KSSTPEEVKK 10 2 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 KS(0.018)S(0.825)T(0.157)PEEVKK 51.211000000000006 0.0052644 6470000.0 3750.4 3657.0 4563.4 3622.4 5127.1 4049.6 4079.8 5192.0 5081.7 6080.1 5890.7 True False 4131.137847101441 3965.1882242426177 4873.099765953435 3846.147420932704 4766.990183534783 4016.6214002405986 4235.059021552224 5088.441486954795 4868.133821087777 5696.201448363641 5166.181244223951 0.7996501965006088 0.7675278966791761 0.9432692225813418 0.7444855763109143 0.9227299543283575 0.7774836403061511 0.8197658621224783 0.9849521815836267 0.9423079816509717 1.1025941946446962 1.0 12.334882542821116 -8.26010099375868 24.977554966994912 0.9729100069307587 0.8261628173006079 0.5929681025885947 0.07064328176669692 59.20100883013849 1104837.6930276798 0.00894520462473872 0.01123062543784013 5.494130947860102e-09 8.26010099375868 -0.14674718963015077 KSS(ph)TPLSEAK ddPTM_A549_MK2206_60min_R1 1 KSSTPLSEAK 10 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KS(0.054)S(0.471)T(0.471)PLS(0.004)EAK 49.423 0.023469 3140100.0 1502.8 1953.8 1687.6 1556.5 1907.0 1608.8 1782.9 1502.5 2530.8 2457.9 2923.9 True False 1756.4359000675468 2053.240074645466 1926.9270562510187 1937.842569873939 1626.4828261876235 1779.0421481649905 2106.8298517685926 1715.4839762132692 1957.5778408571414 1902.658682914313 2197.814934465261 0.799173703173919 0.9342188199958834 0.8767467296876156 0.8817132596041011 0.7400453972178301 0.809459486450273 0.9586020272817894 0.7805406858019439 0.8906927558636457 0.8657046838100766 1.0 11.10185419489378 -9.996010602303217 0.6678566452086696 0.997475664663525 0.8495733524392437 0.06366404036049689 0.07321664431129762 0.48644671050996474 0.4337045084515549 0.0347062177409574 0.013804801965598986 1.0092282477841088e-10 9.996010602303217 -0.1479023122242813 KSS(ph)TSDWPTDNQDGWDGKQENEER ddPTM_A549_PD325901_60min_R1 2 KSSTSDWPTDNQDGWDGKQENEER 24 2 A0A3B3IS53;Q92794;A0A3F2YNX6;A5PLL3;A0A3B3ISZ3 A0A3B3IS53 KAT6A;MYST3 Histone acetyltransferase KAT6A;Histone acetyltransferase 1 KS(0.172)S(0.782)T(0.038)S(0.009)DWPTDNQDGWDGKQENEER;KS(0.154)S(0.814)T(0.03)S(0.002)DWPTDNQDGWDGKQENEER 168.26 1.4636e-41 47279000.0 11162.0 10437.5 8550.8 11272.3 9235.7 8865.599999999999 7988.9 8079.1 16186.900000000001 13116.1 14857.3 True False 12295.158022969892 11317.104755409433 9131.108708137499 11968.564369749252 8587.016293435308 8793.401492980309 8292.921961193824 7917.956012568664 15506.620884461052 12287.947207592371 13029.946288184521 0.9436077287685422 0.8685457718019696 0.7007786913456071 0.9185428784616155 0.6590216186249336 0.6748609164225116 0.6364509705395944 0.6076737261571539 1.1900755798603992 0.9430543254606514 1.0 13.669543516415624 -8.765705419497516 24.99978086138421 1.0897579225838114 0.7495549204460632 0.5174920484280344 0.12398381663058632 53.61685817315312 314203.866754142 0.022337543527124075 0.024189628825357884 1.7151202734223483e-09 8.765705419497516 -0.34020300213774823 KSS(ph)TSGSDFDTK ddPTM_A549_MK2206_60min_R1 3 KSSTSGSDFDTK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KS(0.201)S(0.783)T(0.015)SGS(0.001)DFDTK;KS(0.058)S(0.746)T(0.194)S(0.003)GSDFDTK;KS(0.012)S(0.973)T(0.012)S(0.002)GSDFDTK 169.04 1.0667999999999999e-15 123308400.0 12647.8 14388.8 12166.400000000001 11614.0 15681.400000000001 13332.099999999999 11724.8 14017.1 18053.0 18786.7 17634.5 True False 14782.439430978382 15121.128460466121 13891.778464785728 14459.43052137227 13374.686833024976 14742.893972868265 13855.044391730551 16004.066850568388 13964.024324717075 14542.771422070186 13255.366962559474 1.1152040884822132 1.1407551751057965 1.0480116094879783 1.090835927984019 1.0090016270996138 1.1122207340249723 1.0452403491253695 1.207365054152991 1.0534619195499637 1.0971232605741552 1.0 13.694288989983704 -9.413738355633246 1.7511256198943543 1.0154737269954859 1.0919704474416925 0.030818566723040952 0.05697094852916118 0.2835896321369635 1.7756869983079777 0.011153960250002927 0.009427753435223937 3.8571066231743804e-10 9.413738355633246 0.07649672044620659 KSS(ph)TSGSDFDTK ddPTM_A549_PD325901_60min_R1 5 KSSTSGSDFDTK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KS(0.036)S(0.903)T(0.052)S(0.009)GSDFDTK;KS(0.233)S(0.714)T(0.048)S(0.003)GS(0.002)DFDTK;KS(0.181)S(0.711)T(0.107)S(0.002)GSDFDTK;KS(0.009)S(0.981)T(0.009)SGSDFDTK;KS(0.241)S(0.731)T(0.028)S(0.001)GSDFDTK 204.31 4.726e-25 286903000.0 30497.499999999996 29855.6 31671.199999999997 31441.0 33885.0 33187.0 32114.3 37120.5 35552.2 38111.0 37670.1 True False 33593.583748927114 32371.636190237303 33820.59808639709 33383.03916230817 31505.034496903936 32916.73607511477 33336.42726011926 36380.1025070311 34058.06467010582 35704.66495593604 33036.91651043861 1.0168498545653502 0.9798625177385698 1.0237213898491664 1.0104768449488981 0.9536312048659066 0.9963622381257685 1.0090659414169603 1.101195461009085 1.0309093059379364 1.0807505278119556 1.0 15.01179141913085 -8.001917073598008 24.89976985138208 1.0231003621265584 0.9964930062573948 0.23328267394186686 0.03500915538019895 117.53225641638299 1526589.0188217347 0.005156016641884606 0.007068239135962048 9.955955032829497e-09 8.001917073598008 -0.02660735586916363 KSS(ph)TTLR ddPTM_A549_MK2206_60min_R1 3 KSSTTLR 7 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 KS(0.09)S(0.774)T(0.044)T(0.092)LR;KS(0.022)S(0.936)T(0.041)T(0.002)LR;KS(0.402)S(0.562)T(0.034)T(0.003)LR 70.908 0.0087464 161635000.0 11864.900000000001 11666.9 10032.9 8043.499999999999 15633.8 12037.0 11605.0 11722.6 16115.800000000001 15266.0 14982.1 True False 13867.405051045667 12260.695376641006 11455.716083586658 10014.157861086433 13334.08872996963 13310.747350486072 13713.478282446873 13384.314448956853 12465.597031644356 11817.399997302542 11261.631085075403 1.2313851294084384 1.0887139956919405 1.0172341818911532 0.8892280155010407 1.184028195315399 1.1819555488837032 1.2177168812269836 1.1884880926968526 1.1069086651368398 1.0493506587126333 1.0 13.459128175700343 -10.27584261115892 0.9739391495907072 1.0080930979120817 1.118269546575116 0.1271756599444709 0.09613223871221051 0.7227708497713667 1.3451415978058763 0.0456626387844232 0.0190659031895163 5.298554293447142e-11 10.27584261115892 0.11017644866303433 KSS(ph)TTLR ddPTM_A549_PD325901_60min_R1 2 KSSTTLR 7 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 KS(0.115)S(0.862)T(0.021)T(0.002)LR;KS(0.217)S(0.774)T(0.008)T(0.001)LR 68.335 0.018362 79461000.0 11749.7 11308.4 9991.6 10336.1 11445.3 10565.599999999999 9989.8 9118.2 10160.7 12260.9 13391.8 True False 12942.520894328025 12261.398554833253 10669.690060371742 10974.537422013726 10641.421612141485 10479.557256613512 10369.96730562831 8936.33034791048 9733.681113786044 11486.744681541715 11744.693497614597 1.1019888170735757 1.043994767281377 0.9084690087943809 0.9344251873616546 0.9060620964099921 0.8922801824280864 0.8829491640402961 0.7608823806023964 0.828772680680258 0.9780369903969591 1.0 13.519721443240869 -5.661332838241215 2.5405226765833686 0.9015945956720332 1.1002474786460645 0.5452818984537817 0.06210921889426093 0.2151695120252383 2.5931066482332263 0.01083320503874304 0.06323529976708146 2.1810577338687636e-06 5.661332838241215 0.1986528829740314 KSS(ph)TVATLQGTPDHGDPR ddPTM_A549_MK2206_60min_R1 1 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KS(0.338)S(0.521)T(0.139)VAT(0.002)LQGTPDHGDPR 104.81 2.3519e-09 20795000.0 3992.3 3569.7 3753.6 3382.8 4674.8 3102.7 3353.0 3392.9 4844.1 5109.7 4753.0 True False 4666.102637636187 3751.382482578527 4285.916922460191 4211.586151859662 3987.1431126701127 3431.025654594428 3962.1966980649995 3873.8539653204652 3746.9190844381533 3955.415221159226 3572.6989238733827 1.3060441803412246 1.0500136066633408 1.1996300314647181 1.1788248160843127 1.1160031107092017 0.9603455896235001 1.1090205982902523 1.0842934285435342 1.048764299560929 1.1071224599219565 1.0 11.802798625863081 -2.0000000000002633 0.19233862001223323 0.9978548007434187 2.060311660122443 0.3868293775035735 0.07220454524166901 28.503133666499227 0.31046704713226153 0.0554611895652903 9.13104802627193 0.009999999999993936 2.0000000000002633 1.0624568593790242 KSS(ph)TVATLQGTPDHGDPR ddPTM_A549_PD325901_60min_R1 2 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KS(0.116)S(0.703)T(0.181)VATLQGTPDHGDPR;KS(0.127)S(0.655)T(0.217)VATLQGTPDHGDPR 186.62 1.8349e-40 115027000.0 8218.0 9730.3 9824.900000000001 9131.3 10806.2 13483.2 12407.3 14129.8 15321.4 13121.900000000001 14086.4 True False 9052.28531022815 10550.30652949082 10491.676795923206 9695.319662313044 10047.209791366184 13373.39728954071 12879.46659103507 13847.970054386335 14677.494839603727 12293.380994602541 12353.862101046776 0.7327494216938948 0.8540087661005107 0.8492629033825962 0.78480070305233 0.8132849233046608 1.0825276484515354 1.0425457630730521 1.120942579827968 1.1880895803717983 0.9951042754120503 1.0 13.59267451148047 -7.263602938739788 6.412324794024459 1.0895784443146495 0.8099589901313876 0.8256829793518696 0.060253569370537115 0.05268243931226425 11.50947681283814 0.011041823978625818 0.018416806192162523 5.450007014738945e-08 7.263602938739788 -0.27961945418326184 KSS(ph)TVMK ddPTM_A549_MK2206_60min_R1 1 KSSTVMK 7 1 Q15139;F8WBA3 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 KS(0.087)S(0.908)T(0.005)VMK 78.934 0.0069217 5692000.0 2775.0 2687.0 2296.2 2202.5 4119.4 3286.5 3246.3 3151.3 4508.4 3125.2 3429.3 True False 3243.352157763801 2823.75682289506 2621.8356877006313 2742.1125988739823 3513.441716936183 3634.2752485978594 3836.110689212174 3598.0064254514973 3487.254598435412 2419.2151494543355 2577.7101661348606 1.2582299594321869 1.0954516376560415 1.017118108213048 1.0637784786276552 1.3630088297337175 1.4098851361738864 1.4881854211578092 1.3958149650495877 1.3528497673050515 0.9385132515040743 1.0 11.331874343013839 -4.910051225523025 18.585787981450412 1.211249939718253 3.467523444835119 0.004882533574739001 0.18711950750955297 1828.9448708710704 396643.5443590076 0.027598542012646794 8572.08905915364 1.230123667783653e-05 4.910051225523025 2.256273505116866 KSS(ph)VNGSSATSSG ddPTM_A549_PD325901_60min_R1 1 KSSVNGSSATSSG 13 1 R4GMX3;P35226 R4GMX3 COMMD3-BMI1;BMI1 Polycomb complex protein BMI-1 1 KS(0.425)S(0.557)VNGS(0.014)S(0.003)AT(0.001)SSG 43.382 0.05839400000000001 1994500.0 729.3 921.16 705.81 909.65 814.68 926.36 623.85 1050.8 820.55 1091.0 902.61 True False 803.337999117716 998.7893860113008 753.7105109803206 965.837014534958 757.4596872934239 918.8160312936792 647.5909531338187 1029.8409696633466 786.0651370394891 1022.1140738087747 791.5946921162141 1.0148349996765489 1.261743409801273 0.9521419464870139 1.220115577016986 0.9568781787412759 1.1607152504236191 0.8180840012994249 1.3009700291322261 0.9930146637770617 1.2912088521921494 1.0 9.628618128482422 -7.775714428929065 0.2888745890563367 0.9835097291940648 1.1295890525007868 0.0 0.16799640850156092 3.886641993704708 0.7813574118618801 0.09429784841296551 0.1999743199936421 1.676044599727215e-08 7.775714428929065 0.14607932330672202 KSS(ph)VTEE ddPTM_A549_MK2206_60min_R1 2 KSSVTEE 7 1 O94874;O94874-2 O94874 UFL1 E3 UFM1-protein ligase 1 1 KS(0.006)S(0.565)VT(0.428)EE;KS(0.018)S(0.856)VT(0.127)EE 67.89699999999999 0.018627 239899000.0 22032.7 19492.0 15597.5 11462.8 3695.1 3787.7 3090.7 3372.7 3149.3 27349.0 27209.0 True False 25751.281112202694 20484.059542936564 17809.460037849753 14271.18651458464 3151.55568486937 4188.511899928229 3652.2401833311965 3850.790553460559 2435.9885783986865 21170.841905294576 20452.254369802406 1.2590925502190242 1.001555093759303 0.8707822480511137 0.697780609244521 0.15409331547932523 0.20479463164278525 0.17857396633613656 0.18828196069897415 0.11910611585172756 1.0351348815880737 1.0 14.319972253957546 -6.081384977171102 1.6801220489146487 0.46149421152891407 1.162950682405297 0.4381999674032303 0.31640460851543695 0.36916852038647263 1.9295157950702078 0.05643875070590165 0.2483532713305285 8.291154783073725e-07 6.081384977171102 0.7014564708763831 KSSEAS(ph)PTAQR ddPTM_A549_MK2206_60min_R1 3 KSSEASPTAQR 11 1 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 KS(0.227)S(0.227)EAS(0.273)PT(0.273)AQR;KSS(0.001)EAS(0.767)PT(0.231)AQR;KS(0.005)S(0.003)EAS(0.812)PT(0.18)AQR 80.69 0.00068484 135240000.0 2573.2599999999998 2750.7 2300.73 2069.9399999999996 2903.17 2450.05 2671.6499999999996 2108.92 3528.9 3487.9 3504.46 True False 3007.5633778332517 2890.6988808103606 2627.0081098177307 2577.075392923138 2476.117538806043 2709.3126647884346 3157.054222602254 2407.8658682966297 2729.6097844953247 2699.980967548245 2634.2058638243875 1.1417343720687103 1.0973701488210916 0.9972675810552608 0.9783120705614458 0.9399863438202095 1.0285121227598384 1.198484243755644 0.9140765728920088 1.0362173366862177 1.024969614040857 1.0 11.363152381628185 -5.618876464687088 3.9662709556353537 1.0147492200995216 1.13323358272074 0.26938645475400047 0.06895830296081475 0.20271780764573857 5.770209224463291 0.009037616513888494 0.04129942648044408 2.405046819656086e-06 5.618876464687088 0.11848436262121842 KSSEAS(ph)PTAQR ddPTM_A549_PD325901_60min_R1 7 KSSEASPTAQR 11 1 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 KS(0.096)S(0.078)EAS(0.537)PT(0.289)AQR;KS(0.037)S(0.038)EAS(0.806)PT(0.119)AQR;KS(0.015)S(0.012)EAS(0.647)PT(0.325)AQR;KSSEAS(0.991)PT(0.008)AQR;KS(0.027)S(0.027)EAS(0.637)PT(0.309)AQR;KS(0.01)S(0.056)EAS(0.932)PT(0.002)AQR;KS(0.002)S(0.01)EAS(0.986)PT(0.002)AQR 128.54 8.935700000000001e-08 354861400.0 11713.95 11550.029999999999 11613.890000000001 12716.98 14226.32 12891.07 12874.449999999999 12952.699999999999 11802.13 13518.499999999998 13951.400000000001 True False 12903.141580645779 12523.391562933813 12402.078415393995 13502.47897224292 13227.11236133966 12786.089399940634 13364.39423991936 12694.348237303415 11306.127519112626 12664.939602918355 12235.466245211266 1.054568851080426 1.0235320266471444 1.0136171492645765 1.1035524680171087 1.081046859699074 1.0450022208957401 1.092266855392612 1.0375042505856078 0.924045499576907 1.0351006940888074 1.0 13.57878145741448 -8.622313199547891 6.071653289061365 0.9643228094777228 1.0584178444082724 0.3890622329246003 0.037004700094597345 0.10965086750388638 5.740253025936234 0.00627089399531082 0.007111480699919144 2.386089889151261e-09 8.622313199547891 0.0940950349305496 KSSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KSSEGGVGVGPGGGDEPPTSPR 22 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 KSSEGGVGVGPGGGDEPPT(0.371)S(0.629)PR;KSSEGGVGVGPGGGDEPPT(0.132)S(0.868)PR 142.45 3.7488e-27 111358000.0 9650.5 11226.900000000001 10014.5 9681.7 14182.400000000001 10355.7 9809.900000000001 9110.5 14699.3 15039.900000000001 16599.5 True False 11279.268467927775 11798.301256032952 11434.706686907928 12053.716934628035 12096.187747311671 11451.53330044268 11592.231848597628 10401.941274736098 11369.932019958658 11642.376144335807 12477.386027106299 0.9039768781236958 0.9455747566358786 0.9164344728989535 0.9660450440855264 0.9694488670169779 0.9177830417016014 0.9290593256804165 0.8336634974776421 0.9112431077517543 0.9330781398478425 1.0 13.607028105358038 -10.675523201889026 1.0562758548118627 0.9979019144909675 0.9225327995663368 0.08545117462916163 0.039377537752068044 0.41249133287099404 0.851725549426345 0.02157595750280353 0.006386079512324977 2.1109444170179432e-11 10.675523201889026 -0.07536911492463072 KSSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KSSEGGVGVGPGGGDEPPTSPR 22 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 KSSEGGVGVGPGGGDEPPT(0.337)S(0.663)PR;KSSEGGVGVGPGGGDEPPT(0.097)S(0.903)PR 153.77 7.438699999999999e-29 136722000.0 12505.400000000001 12585.2 13103.8 15271.2 17289.5 15022.8 14418.4 16615.6 18456.2 20680.1 20597.2 True False 13774.939002011084 13645.79897176324 13993.102667550651 16214.467340588426 16075.145165536964 14900.459297593468 14967.100102051214 16284.188823313953 17680.550097164374 19374.354956712043 18063.874976408508 0.7625683315457624 0.7554192547050236 0.774645677398991 0.8976184435379776 0.8899056922466064 0.8248761307888549 0.8285653062589453 0.9014781626080322 0.9787794767321653 1.072547002346674 1.0 14.140819785634624 -7.369129531922616 0.28806365923851096 1.0220764072951107 0.707461981158443 0.798651120477582 0.04450164455453072 0.8380349110726429 0.13583782142033052 0.029729103763060427 0.08995969517485275 4.274353809987793e-08 7.369129531922616 -0.3146144261366677 KSSELDASDSSS(ph)SSNLSLAK ddPTM_A549_PD325901_60min_R1 1 KSSELDASDSSSSSNLSLAK 20 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 KSSELDASDS(0.004)S(0.12)S(0.857)S(0.016)S(0.003)NLSLAK 139.36 4.5259e-18 4013800.0 2158.2 2119.0 2213.1 2345.9 2335.5 2071.7 2418.7 2254.8 2504.6 2256.8 3230.5 True False 2377.298875217133 2297.575566631147 2363.2942744514075 2490.8009150745434 2171.4625370376016 2054.8287620699457 2510.7449520634245 2209.8262451436185 2399.3403719811167 2114.305262852103 2833.1689798267553 0.8390953353451237 0.8109560647426123 0.8341522483406267 0.8791572026977553 0.7664430016350045 0.7252757518881192 0.8861966829161575 0.7799839193773562 0.8468751384281474 0.7462686757855828 1.0 11.468200936179652 -10.251534301307741 0.633584346765395 1.0051131296805522 0.8136942909378994 0.0 0.08676689982330964 0.34769061612609686 0.2540002771060558 0.033805390657802414 0.010029854465774563 5.6035815758773424e-11 10.251534301307741 -0.19141883874265286 KSSGEIVYCGQVFEKS(ph)PLR ddPTM_A549_MK2206_60min_R1 3 KSSGEIVYCGQVFEKSPLR 19 2 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 1 KSSGEIVYCGQVFEKS(1)PLR;KSSGEIVYCGQVFEKS(1)PLR;KSSGEIVY(0.012)CGQVFEKS(0.987)PLR 78.717 6.6604e-05 30721000.0 5322.4 6558.7 7139.0 6118.9 9867.7 8147.0 6181.1 6769.5 9891.1 8251.199999999999 7703.700000000001 True False 6220.690999813353 6892.509815527294 8151.417548338476 7618.0307746878625 8416.174401663151 9009.110132459085 7304.125860545653 7729.097355724275 7650.781642841027 6387.248189292719 5790.658678696274 1.0742631097735322 1.190280794978421 1.4076839960067737 1.3155724067651329 1.4534053669276175 1.555800580269639 1.2613635625628214 1.3347527085579194 1.3212282172644902 1.1030261916129311 1.0 12.499511746596905 -10.506893613512627 0.7157884596038406 0.9875639136032075 1.3337143540028447 0.40535682480177093 0.12488111358785635 0.5219606852064136 0.4568665546898918 0.10271565072652943 0.02564132753228587 3.112478688770392e-11 10.506893613512627 0.34615044039963716 KSSGEIVYCGQVFEKS(ph)PLR ddPTM_A549_PD325901_60min_R1 3 KSSGEIVYCGQVFEKSPLR 19 2 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 1 KSSGEIVYCGQVFEKS(1)PLR;KSSGEIVYCGQVFEKS(1)PLR;KSSGEIVYCGQVFEKS(1)PLR 83.31200000000001 2.9505e-05 57091900.0 10322.7 10751.900000000001 12149.0 9888.0 11157.8 9586.6 8889.2 10978.4 10402.5 10114.3 9585.6 True False 11370.652904829905 11658.00034679634 12973.504197871825 10498.75930272266 10374.114620320335 9508.529908027096 9227.483370356882 10759.427199611808 9965.319100668192 9475.681371882765 8406.631968124857 1.3525812653561649 1.386762307544756 1.5432463615706056 1.2488662930089542 1.2340393465130288 1.1310748399692372 1.0976433136771562 1.2798737045237576 1.185411605795681 1.1271673849659871 1.0 13.03731219975404 -2.0000000234486928 0.09144932820980431 0.8414113918507835 2.516674510669752 0.5874059401171294 0.09349703630139747 56.611130806700274 0.3603651645823704 0.8277797407806726 11.929103799659302 0.00999999946007391 2.0000000234486928 1.6752631188189684 KSSLVT(ph)SK ddPTM_A549_MK2206_60min_R1 1 KSSLVTSK 8 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 KS(0.002)S(0.031)LVT(0.825)S(0.142)K 90.05 0.0016332999999999999 46137000.0 5112.5 5409.0 6404.6 5675.6 7307.6 4627.9 5040.8 5654.3 7856.7 7375.5 5846.6 True False 5975.3650113756485 5684.294996293036 7312.868585248444 7066.122254787363 6232.661720319182 5117.621306248605 5956.648110827933 6455.814340567514 6077.169994571796 5709.369427492783 4394.727862048834 1.3596666731008724 1.2934350373274313 1.6640094255663795 1.60786343923765 1.4182133492592413 1.164491059945349 1.3554077289443192 1.46899069594671 1.3828319261931734 1.2991406081811536 1.0 12.101558115735354 -11.120554129074398 0.3659451620446326 0.7840913031127233 1.446141718283811 0.2020744550397614 0.15827838689808674 1.9961504730397959 0.27107556502944324 0.537113082025609 0.046954659391564554 7.57610300857734e-12 11.120554129074398 0.6620504151710876 KSSS(ph)ISEEKGDS(ph)DDEKPR ddPTM_A549_PD325901_60min_R1 1 KSSSISEEKGDSDDEKPR 18 3 S4R3H4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 KS(0.279)S(0.325)S(0.38)IS(0.016)EEKGDS(1)DDEKPR 72.755 0.00023543 26716000.0 1883.3 2416.6 2250.8 2959.6 2863.9 2809.9 2437.9 3054.5 2727.6 3518.3 2964.2 True False 2074.491229587817 2620.255363058436 2403.5528231599246 3142.4077702607174 2662.749543918642 2787.0171060193775 2530.675618570068 2993.5756012911065 2612.9684574845046 3296.153937563165 2599.62219161197 0.7979971998552103 1.007936988502807 0.9245777447643395 1.2087940241470927 1.0242832795128312 1.0720854418815404 0.9734782333893104 1.1515425629732967 1.0051339251971299 1.2679357593571283 1.0 11.34408625334143 -4.882713300635634 1.542009589135761 1.026837632477187 0.4510448942042235 0.29380008105459576 0.10578832672605927 2.229049057896753 2.250437208175149 0.010443523865249282 2.5860234179309494 1.3100464643622456e-05 4.882713300635634 -0.5757927382729635 KSSS(ph)LESLQTAVAEVR ddPTM_A549_PD325901_60min_R1 1 KSSSLESLQTAVAEVR 16 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 KS(0.002)S(0.164)S(0.834)LESLQTAVAEVR 158.0 1.1382000000000001e-20 4662100.0 2244.4 2202.6 2375.4 2136.4 2246.5 2673.1 2238.6 2510.2 2238.2 2121.9 2360.3 True False 2472.249835760048 2388.2208320253726 2536.608928440591 2268.3605758835656 2088.713590004269 2651.3311598634805 2323.7911480089247 2460.1320917861935 2144.1362375501612 1987.92287187428 2069.998063174461 1.1943247096418586 1.153730950048764 1.2254160878539933 1.095827390487943 1.0090413257687336 1.2808375075469933 1.1226054697100813 1.1884707215684247 1.0358155766880308 0.9603501120313542 1.0 11.015413702507505 -8.84260303121967 5.240351893524399 1.0156823528549344 1.1565091207569662 0.5113544735031288 0.06924826485207833 0.12731121886792668 5.977417537440689 0.011517113299877004 0.012233274812387717 1.436802148635771e-09 8.84260303121967 0.14082676790203186 KSSS(ph)VNPVLEETHEGEAPGCEEQKPTSEILSTSGK ddPTM_A549_PD325901_60min_R1 1 KSSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK 35 2 A0A2R8YFC5;A0A2R8YHG5;Q9BZV2 A0A2R8YFC5 SLC19A3 Thiamine transporter 2 1 KS(0.16)S(0.16)S(0.68)VNPVLEETHEGEAPGCEEQKPTSEILSTSGK 213.3 1.1340999999999996e-101 15175000.0 1808.5 1826.0 1691.0 1839.9 2174.7 1953.9 1670.2 2371.3 1801.6 2295.6 1555.1 True False 1992.0975886526667 1979.8834283475571 1805.7614288090606 1953.5464442839213 2021.9565743077148 1937.988086213481 1733.7603749685086 2324.0025612511386 1725.885017232764 2150.655424230453 1363.8325585911132 1.4606614104524482 1.4517056480839892 1.3240345506009004 1.4323946381673152 1.4825548499857393 1.4209868168974427 1.271241373471494 1.7040233763387453 1.265466941935793 1.5769204296252872 1.0 10.413450816327293 -9.648708610748585 0.8844858523120759 1.0383034461708642 1.4340286731339253 0.0 0.19711859721740357 0.20932376062629043 0.3444091652040168 0.03717253734956875 0.02328574678721245 2.2453879582775252e-10 9.648708610748585 0.3957252269630611 KSSS(ph)YSSSSTTVK ddPTM_A549_PD325901_60min_R1 1 KSSSYSSSSTTVK 13 1 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 KS(0.168)S(0.168)S(0.663)YSSSSTTVK 122.31 3.1854e-06 9549300.0 3504.4 3353.9 3702.0 3121.4 4120.3 3027.1 3283.3 3329.0 3652.6 3335.4 4140.4 True False 3860.1641081970743 3636.5449235130723 3953.23998193444 3314.2017887862553 3830.9043422633404 3002.4483012318074 3408.2477781906978 3262.600483450021 3499.0939242586537 3124.8022747770765 3631.157048158086 1.0630672419291676 1.001483790230918 1.0886998082167036 0.9127123241522679 1.055009268796726 0.8268571866796032 0.9386120547772894 0.8985016181288505 0.9636305667455441 0.860552775144259 1.0 11.826213612954746 -6.257946463172383 24.999416110100775 0.9635608516055185 1.0461236303566586 0.3118738682178499 0.06777130058607674 316.679465999012 2266514.6752664116 0.008393406243442083 0.02127265872445658 5.521454997737266e-07 6.257946463172383 0.08256277875114004 KSSSGPVWSGASSACTS(ph)PAVGK ddPTM_A549_PD325901_60min_R1 1 KSSSGPVWSGASSACTSPAVGK 22 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KSSSGPVWSGAS(0.074)S(0.092)ACT(0.312)S(0.522)PAVGK 76.691 2.8563e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSSSGSSDS(ph)KESMSTVPADFETDESVLMR ddPTM_A549_PD325901_60min_R1 1 KSSSGSSDSKESMSTVPADFETDESVLMR 29 2 F8W8D3;Q14493;E7EUV9;H0YAE8;Q14493-2;H7C4H8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 KS(0.095)S(0.095)S(0.108)GS(0.108)S(0.108)DS(0.122)KES(0.122)MS(0.122)T(0.122)VPADFETDESVLMR 40.937 0.016048 4176500.0 1502.9 1560.3 1785.2 1848.9 1553.1 2017.9 1768.9 1773.7 1761.8 2327.0 1736.1 True False 1655.473301623496 1691.7919568733255 1906.3544072796776 1963.1023538434379 1444.0156139041308 2001.466891432612 1836.2164574792203 1738.3221620592687 1687.757672824535 2180.072822871696 1522.5707060446473 1.087288291473901 1.1111418012686474 1.252062974620094 1.2893341150265587 0.9484062764187892 1.3145313275020556 1.2059974950190429 1.1417020931494888 1.108492148262206 1.4318368363562675 1.0 10.572293511080328 -9.612540482288704 0.7215650759751526 1.0119397774827008 1.1735786949762452 0.0 0.15915001857074298 0.5374669727250021 0.6012064642400212 0.0375006781841647 0.021593364268909652 2.440391578987581e-10 9.612540482288704 0.16163891749354442 KSSSISEEKGDS(ph)DDEKPR ddPTM_A549_MK2206_60min_R1 2 KSSSISEEKGDSDDEKPR 18 3 S4R3H4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(0.999)DDEKPR 114.15 1.0534999999999999e-10 426690000.0 5717.3 5769.4 5403.0 4471.9 7461.6 5256.8 5173.6 5699.3 7182.9 8357.7 7791.1 True False 6682.240465435306 6063.03781690017 6169.226644302118 5567.515700751216 6364.00852432175 5813.07108681857 6113.576151836887 6507.193228374233 5555.984618734297 6469.689765325258 5856.354846578982 1.1410238348755062 1.0352920845364968 1.0534243238190906 0.9506793639739074 1.0866842414850113 0.9926090954366099 1.0439217417653854 1.111133699860322 0.9487103777497111 1.104729808014376 1.0 12.515787256298035 -2.0000000000000004 0.2651835981009089 0.9827341314429717 1.8235768019233751 0.0 0.06436480147709038 42.5448355444302 0.5241413468566307 0.02304161491994911 16.54628273532728 0.00999999999999999 2.0000000000000004 0.8408426704804034 KSSSISEEKGDS(ph)DDEKPR ddPTM_A549_PD325901_60min_R1 4 KSSSISEEKGDSDDEKPR 18 3 S4R3H4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR 157.55 3.7531e-23 974860000.0 27835.500000000004 26327.0 28866.6 26724.3 32185.2 29587.899999999998 27698.200000000004 30240.199999999997 29906.1 27782.1 30530.699999999997 True False 30661.339468587943 28545.66868461455 30825.661064967244 28374.999315711066 29924.62258491227 29346.945952236965 28752.27015803663 29637.035488022037 28649.250618264163 26027.933464677142 26775.617450053163 1.1451216587547663 1.0661068316300535 1.1512586450142175 1.0597327724987617 1.117607190225705 1.0960324633775607 1.0738228618507373 1.1068665566090687 1.0699753487181405 0.9720759386120323 1.0 14.708632223688705 -10.415450060950075 0.2972720070197029 0.9616411234700484 1.1142289761821471 0.7062559830009267 0.028520320640374665 1.2766586695639932 0.16976385985932888 0.0674451268103475 0.013582256480816872 3.841934346238797e-11 10.415450060950075 0.15258785271209874 KSSSYSSS(ph)STTVK ddPTM_A549_MK2206_60min_R1 1 KSSSYSSSSTTVK 13 1 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 KSSSYS(0.007)S(0.051)S(0.51)S(0.378)T(0.051)T(0.003)VK 53.828 0.013102 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSSSYSSS(ph)STTVK ddPTM_A549_PD325901_60min_R1 1 KSSSYSSSSTTVK 13 1 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 KS(0.001)S(0.001)S(0.001)Y(0.004)S(0.012)S(0.103)S(0.498)S(0.375)T(0.005)T(0.001)VK 61.097 0.0032445 1586400.0 961.11 825.47 680.34 1077.9 1087.6 937.7 1127.8 948.97 1087.6 913.96 1108.3 True False 1058.681179668214 895.0352538872164 726.5119636167691 1144.479434911485 1011.2107280163116 930.063682093444 1170.7190461558407 930.0420488974363 1041.8919542308804 856.2524096226103 971.986126092553 1.0891937150627662 0.9208313059830554 0.7474509605784129 1.177464784926886 1.0403551047394513 0.9568692979521838 1.2044606550735522 0.9568470412600079 1.0719206028375665 0.8809306909192216 1.0 9.92479191105401 -6.272529561142966 24.914147160285857 1.0439480959321565 0.9193259133137074 0.1669317170656789 0.1153887267001703 716.9771460031309 1610692.6194861904 0.013722839913618137 0.032171038187797284 5.339129304607076e-07 6.272529561142966 -0.12462218261844915 KSSSYSSSS(ph)TTVK ddPTM_A549_MK2206_60min_R1 1 KSSSYSSSSTTVK 13 1 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 KSSSY(0.001)S(0.02)S(0.228)S(0.179)S(0.558)T(0.012)T(0.002)VK 69.594 0.0013507 3028300.0 698.24 657.44 629.58 575.93 1029.0 739.66 901.43 524.53 1216.7 1095.5 1227.8 True False 816.0858416709901 690.9008878467174 718.8639109235105 717.0328758544798 877.6354631080578 817.9303302534291 1065.2081627010843 598.8837338057543 941.1193926706516 848.0257891422065 922.9033744438747 0.8842592456255229 0.7486167100245377 0.7789156815649149 0.7769316872273343 0.9509505408807347 0.8862578173433373 1.15419251050302 0.6489127143636582 1.0197377306565312 0.9188673620932547 1.0 9.85003579917572 -7.2255982643312855 0.48005758727403264 1.0069115959136892 0.7671529174920826 0.13326655415621358 0.12756253290167224 1.0827884529516922 0.4477775609729318 0.031219450492961744 0.10861023426202973 5.948421513659453e-08 7.2255982643312855 -0.23975867842160659 KSST(ph)FPR ddPTM_A549_MK2206_60min_R1 1 KSSTFPR 7 1 Q9P2M4 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 KS(0.278)S(0.278)T(0.444)FPR 47.198 0.037089 5932600.0 1814.5 2040.0 1965.8 1854.2 2639.2 2166.0 1574.8 1708.5 3052.1 3218.2 3098.9 True False 2120.7432397342054 2143.8272864554992 2244.5799995130665 2308.479083238202 2250.9771761270986 2395.204682325563 1860.9207754586232 1950.6851070618095 2360.804223202181 2491.206384863031 2329.3576047109655 0.9104412458804728 0.9203512943310018 0.9636047273177626 0.9910367899585112 0.9663510538590778 1.0282683420877183 0.7988987056753497 0.8374347945187476 1.0135001248531428 1.069482152428952 1.0 11.185716424828852 KSST(ph)PEEVK ddPTM_A549_MK2206_60min_R1 6 KSSTPEEVK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 KS(0.004)S(0.109)T(0.887)PEEVK;KS(0.002)S(0.013)T(0.986)PEEVK;KS(0.099)S(0.3)T(0.601)PEEVK;KSS(0.005)T(0.995)PEEVK;KS(0.136)S(0.136)T(0.728)PEEVK;KS(0.185)S(0.133)T(0.682)PEEVK 177.1 2.0219e-07 464112700.0 23423.8 25180.6 21738.0 19616.0 27902.800000000003 21527.3 19585.4 22022.899999999998 29776.2 29657.5 33298.3 True False 27377.16478307305 26462.184984961434 24820.77527185627 24421.920880595702 23798.335082615642 23805.304597334787 23143.813662476066 25144.713517302618 23031.938242820626 22957.850151971703 25029.413123672006 1.0937997086787712 1.057243526015173 0.9916642930944948 0.9757288658717388 0.9508147460360526 0.9510931990179388 0.9246646554643904 1.0046065959701453 0.9201948974599715 0.9172348563881794 1.0 14.611336843428502 -5.700584838069914 1.526864593867245 0.9605474617438333 1.1038575946181879 0.7334900933026184 0.027990774475232523 0.24405480650254 0.8837994370717323 0.004523375724234844 0.04096991475455454 1.99257722440928e-06 5.700584838069914 0.14331013287435457 KSST(ph)PEEVK ddPTM_A549_PD325901_60min_R1 2 KSSTPEEVK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 KS(0.004)S(0.059)T(0.938)PEEVK;KSS(0.024)T(0.976)PEEVK 186.46 1.1109000000000001e-10 43088000.0 9030.5 9379.4 9796.4 10182.5 12636.4 9055.400000000001 10304.6 9141.2 11662.900000000001 10633.599999999999 11559.8 True False 9947.269712097263 10169.83495500716 10461.242614538774 10811.449898864626 11748.862857213418 8981.655824708301 10696.747191893486 8958.871594867327 11172.748871827258 9962.192681258466 10138.01788360976 0.9811848653551024 1.0031383917214072 1.0318824384253233 1.0664263984327362 1.1588915103619937 0.885938052962901 1.0551122827655521 0.8836906481839245 1.1020644271983735 0.982656846301726 1.0 13.30748799352658 KSST(ph)PEEVKK ddPTM_A549_PD325901_60min_R1 2 KSSTPEEVKK 10 2 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 KS(0.127)S(0.371)T(0.502)PEEVKK;KS(0.003)S(0.064)T(0.933)PEEVKK 77.64399999999999 0.00047929 179114000.0 18654.7 15989.400000000001 19537.7 17638.4 21118.5 19119.3 18952.3 19279.9 22512.0 20994.2 23581.9 True False 20548.511411135696 17336.88285280418 20863.64581173435 18727.88390828716 19635.20941486986 18963.598759783712 19673.540147596497 18895.347269711052 21565.898927588805 19668.622629107416 20681.47579798067 0.9935708462904781 0.8382807408017249 1.0088083662661764 0.905539048142577 0.9494104582607703 0.9169364384351772 0.9512638430530868 0.9136363117546952 1.042764024107723 0.9510260689920326 1.0 14.336051517352233 -8.760323105862401 24.99969221270657 1.0201941247974025 0.9334192315428038 0.2170881333829512 0.04868171418728553 17.948972612331673 401978.7069320233 0.006852407173106845 0.0075586900660537725 1.7365084226954948e-09 8.760323105862401 -0.08677489325459864 KSST(ph)PLSEAK ddPTM_A549_PD325901_60min_R1 4 KSSTPLSEAK 10 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KS(0.016)S(0.145)T(0.838)PLSEAK;KS(0.007)S(0.036)T(0.956)PLS(0.001)EAK;KS(0.069)S(0.387)T(0.542)PLS(0.001)EAK;KS(0.002)S(0.116)T(0.881)PLSEAK 134.08 2.4749000000000002e-06 184311600.0 15425.1 13566.2 14880.0 13768.6 17206.5 15225.599999999999 17908.0 15544.199999999999 16125.3 14922.6 16242.9 True False 16991.044796641552 14709.471284583042 15889.846280708945 14619.05515124062 15997.97479920251 15101.607761631587 18589.498739633604 15234.158736811 15447.609718241269 13980.384489293156 14245.126272226593 1.1927619644740262 1.0325967635163593 1.1154584365944882 1.026249600871778 1.123048998898199 1.0601245277182876 1.3049725488132133 1.0694295329984334 1.0844136740549033 0.9814152729941329 1.0 13.798180789663842 -9.939711332829104 0.8260187543441564 1.0082013535336989 1.1116820136285481 0.2709256586304366 0.07598440053128115 0.5981328875904172 0.8336322579556533 0.030427971324606045 0.014881514504939356 1.1489170307615106e-10 9.939711332829104 0.10348066009484924 KSST(ph)SGSDFDTK ddPTM_A549_PD325901_60min_R1 1 KSSTSGSDFDTK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KS(0.096)S(0.287)T(0.521)S(0.096)GSDFDTK 144.97 4.9386e-12 24591000.0 5622.6 4982.1 5169.8 5831.2 5553.3 5290.7 4846.0 6052.2 6263.6 6190.8 6259.6 True False 6193.40221286065 5401.959051681469 5520.653716532865 6191.379980383935 5163.255365844965 5247.614293325995 5030.417181832948 5931.4841231409455 6000.362674255735 5799.911831471465 5489.708882873721 1.1281840886284964 0.9840155765880397 1.0056368806287128 1.1278157207387118 0.940533546679097 0.9559002863880469 0.9163358730234988 1.08047334561682 1.09302019511 1.056506265672026 1.0 12.422513930364284 -12.809576158030758 12.127353656952192 1.0362884129099703 1.0309054568053755 0.0 0.07169170455487374 0.0 0.0 0.0 0.009557866218835063 1.550328896743309e-13 12.809576158030758 -0.005382956104594827 KSST(ph)SGSDFDTKK ddPTM_A549_PD325901_60min_R1 1 KSSTSGSDFDTKK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KS(0.073)S(0.343)T(0.461)S(0.095)GS(0.021)DFDT(0.007)KK 53.169 0.0077845 19717000.0 3120.9 2819.2 2088.1 2646.3 3616.1 3243.1 3028.3 3385.8 3965.3 2989.0 3555.4 True False 3437.731470514849 3056.7838779832596 2229.8110227653433 2809.755940816645 3362.1176108677664 3216.689268846379 3143.5436136493463 3318.2675628912853 3798.6522307021946 2800.274029894068 3118.108339537547 1.1025054604179358 0.9803327996090788 0.7151165963322657 0.9011091453074287 1.0782555462349357 1.0316156202973539 1.008157277214932 1.06419251724378 1.2182553705833006 0.8980682275810155 1.0 11.606455340407265 -6.774797882815474 8.906593460305169 1.0881388085588883 0.9136707594128013 0.11918247089034228 0.11707324584817365 0.15687263721622294 83.32477085615501 0.017222905659115138 0.033412084511231996 1.6795855019432994e-07 6.774797882815474 -0.17446804914608705 KSST(ph)TLR ddPTM_A549_PD325901_60min_R1 1 KSSTTLR 7 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 KS(0.024)S(0.282)T(0.597)T(0.097)LR 83.948 0.008817100000000001 190440000.0 4573.5 4580.8 5317.2 4300.0 4518.4 4282.3 4087.5 3862.3 4047.6 4913.5 5380.5 True False 5037.798353167247 4966.840092319 5678.057166921075 4565.60123399145 4201.043171633779 4247.426368592042 4243.052049265822 3785.2633965842642 3877.4934479081553 4603.260771456844 4718.732609799679 1.0676168305669502 1.0525792629156525 1.2033013176311598 0.9675481981135756 0.8902905756747514 0.9001201635734039 0.8991931520879181 0.8021779807406711 0.8217234941127048 0.9755290566574957 1.0 12.204183707154955 -6.4703487448798915 5.347001302525684 0.9020245352584413 1.1018505473319626 0.6680624550498115 0.06438630993970375 0.11801068263728778 7.486605685325431 0.01117299897718231 0.02599530401845438 3.385721684995686e-07 6.4703487448798915 0.19982601207352135 KSST(ph)VATLQGTPDHGDPR ddPTM_A549_PD325901_60min_R1 1 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KS(0.076)S(0.248)T(0.673)VAT(0.004)LQGTPDHGDPR 198.55 8.2775e-49 80145000.0 5507.7 7061.4 7466.5 7324.3 8812.4 10349.0 8971.4 9876.7 12129.0 10562.0 11366.0 True False 6066.837649445556 7656.488959985452 7973.22158971191 7776.705376307807 8193.447425129592 10264.721175200008 9312.811536338455 9679.701470378737 11619.260309733669 9895.1135174778 9968.05405501034 0.6086280848764181 0.7681026725709816 0.7998774430506075 0.7801628415527027 0.8219706052869206 1.0297617888659574 0.9342657538717365 0.9710723293593432 1.1656498094423322 0.9926825700252019 1.0 13.283096176527604 -7.066127902418836 0.7021471955045823 1.0739544430028467 0.6887290997926889 0.7683772068134705 0.07181378794645113 0.2699200876052659 0.24741241072969264 0.015539702088833053 0.05119021018392117 8.58760573944018e-08 7.066127902418836 -0.3852253432101578 KSSTPEEVK ddPTM_A549_MK2206_60min_R1 2 KSSTPEEVK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 0 ; 93.05799999999999 0.00099744 22796100.0 4935.700000000001 4723.9 3867.2 4051.4 5766.6 4074.2000000000003 3699.6 4126.8 5992.9 6533.0 6199.8 False True 5768.725493720646 4964.326332591728 4415.62711065059 5043.993181874257 4918.340778968826 4505.329139764922 4371.7694316019315 4711.7865377949565 4635.5177186947885 5057.1907626344455 4660.218554224742 1.2378658697221363 1.0652561193919319 0.9475150273043705 1.0823512080354263 1.0553884376324116 0.9667634870215681 0.9381039495752157 1.0110655719190391 0.9946996401043122 1.0851831740916587 1.0 12.186181900422001 -5.321583979956876 2.9373686585295355 0.9993429501739457 1.2627074945803543 0.647927630409491 0.04812704903315678 0.11939305820400054 1.5567061042856714 0.005428021583271678 0.06838219171513946 4.76887588974227e-06 5.321583979956876 0.26336454440640855 KSSTPEEVK ddPTM_A549_PD325901_60min_R1 2 KSSTPEEVK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 0 ; 89.40299999999999 0.0011023 43325000.0 7175.6 6806.1 6056.1 6440.0 7631.200000000001 6274.6 6653.6 6901.4 6731.5 7357.1 8011.599999999999 False True 7904.061629602471 7379.673933010032 6467.1033642877255 6837.78417369882 7095.210838210811 6223.501737937003 6906.806388989622 6763.746162956432 6448.59846442182 6892.571450429463 7026.223989716778 1.124937326389032 1.0503043944813808 0.9204237402269906 0.9731804997543846 1.0098184812489608 0.8857533928672643 0.983004014545803 0.9626431171074968 0.9177900496567798 0.9809780417642645 1.0 12.778533853778976 -5.550075510904411 3.8315603232984454 0.9590924135431809 1.1142250232059185 0.6695985357515555 0.036280570558711735 0.09627165212912402 2.970499747772218 0.005402782002264771 0.02821296532312282 2.8178929408256237e-06 5.550075510904411 0.15513260966273767 KSSTVATLQGT(ph)PDHGDPR ddPTM_A549_MK2206_60min_R1 1 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KSSTVAT(0.002)LQGT(0.998)PDHGDPR 87.32600000000001 4.7383e-06 2927200.0 558.96 553.66 669.9 484.87 699.45 553.82 415.09 601.02 634.99 712.05 1047.1 True False 653.2987827400555 581.8389291269365 764.9018932108063 603.6631717666412 596.5618315558122 612.4248648040373 490.50647998801105 686.2164255465551 491.16577887066376 551.1974104597975 787.0761715101659 0.8300324751117402 0.7392409403152939 0.9718270237341657 0.7669691875036574 0.7579467568065069 0.7781011380753345 0.6232007748968877 0.8718551652121664 0.6240384306493008 0.7003101229735021 1.0 9.620359453134215 -11.047541779097138 1.3568221693701406 0.9996700851233293 0.7585187759166576 0.0 0.12921617573477384 0.3241454146070249 1.0664062048634282 0.0708488323584702 0.01590289325747494 8.963099568506376e-12 11.047541779097138 -0.24115130920667172 KSSTVATLQGT(ph)PDHGDPR ddPTM_A549_PD325901_60min_R1 2 KSSTVATLQGTPDHGDPR 18 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KSSTVAT(0.001)LQGT(0.999)PDHGDPR;KSSTVAT(0.001)LQGT(0.999)PDHGDPR 109.75 1.0803e-09 15529800.0 3511.7 3138.1000000000004 3628.8 3312.6 3921.5 3806.2 3118.2 4353.2 4277.700000000001 4402.9 4108.5 True False 3868.205198823095 3402.558700162906 3875.072189747082 3517.2117785395503 3646.0673684405697 3775.203569141589 3236.86480734451 4266.372010980663 4097.923145102462 4124.900142596386 3603.180545927326 1.073552976188031 0.9443209011574003 1.0754587899091195 0.9761408660232288 1.0119024905820273 1.0477419937806616 0.8983354472767504 1.1840572395970947 1.137307190930064 1.1447941866967393 1.0 11.815055227902809 -8.260700117951227 24.99993545061794 1.075592526966092 1.0053048280776564 0.3232769496571304 0.0697477643935 91.95410603533645 3109616.683254685 0.012061947355634867 0.015115198536261445 5.486556830608248e-09 8.260700117951227 -0.07028769888843556 KSSTVATLQGTPDHGDPRT(ph)PGPPR ddPTM_A549_PD325901_60min_R1 1 KSSTVATLQGTPDHGDPRTPGPPR 24 2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 KSSTVAT(0.001)LQGT(0.065)PDHGDPRT(0.934)PGPPR 50.538999999999994 0.005188 4399200.0 463.95 590.89 640.65 415.95 839.74 1041.7 665.1 688.43 620.56 902.62 839.25 True False 511.0498624580615 640.6863740286357 684.1283615414096 441.64228680901 780.7595593457306 1033.216740574534 690.410744456685 674.6987235871123 594.4800212555307 845.6284191579067 736.0275704440811 0.6943352164779919 0.8704651833111069 0.9294874119031191 0.6000349776877866 1.060774882216247 1.403774507999944 0.9380229385159129 0.9166758837308688 0.807687164350178 1.1489086185286483 1.0 9.523615998173824 -4.670299380055807 0.7740497200927566 0.9411507701667492 0.29646403481850875 0.1489483933499356 0.19185629516077327 9.712900199035872 2.1948674742836953 0.030388671261646325 6.7179227160428665 2.136488797360952e-05 4.670299380055807 -0.6446867353482404 KSSVNGSSATS(ph)SG ddPTM_A549_PD325901_60min_R1 1 KSSVNGSSATSSG 13 1 R4GMX3;P35226 R4GMX3 COMMD3-BMI1;BMI1 Polycomb complex protein BMI-1 1 KS(0.002)S(0.002)VNGS(0.023)S(0.092)AT(0.092)S(0.767)S(0.023)G 102.97 0.00010251 68430000.0 660.48 874.17 834.85 708.5 568.81 980.08 645.82 823.1 804.82 766.32 795.31 True False 727.5314433803221 947.8393737998816 891.5079413608775 752.2624358797533 528.8587478879718 972.0985534244886 670.3970335062642 806.6826247905414 770.996214236941 717.9344244190103 697.4919118854722 1.0430679280762505 1.358925254398529 1.278162407576796 1.0785249593020003 0.758229219401773 1.3937058435512106 0.961153845775839 1.1565476402585129 1.1053837343472137 1.0293086015553607 1.0 9.446032677325332 -2.000000003565166 0.07143562197867745 0.8871538073908998 1.6877446346961573 0.07841792823096694 0.1694441444652882 350.23424185895186 1.7924337791353502 3.380959804438742 28.07138685406093 0.00999999991790902 2.000000003565166 0.8005908273052575 KSSVNGSSATSS(ph)G ddPTM_A549_PD325901_60min_R1 1 KSSVNGSSATSSG 13 1 R4GMX3;P35226 R4GMX3 COMMD3-BMI1;BMI1 Polycomb complex protein BMI-1 1 KS(0.001)S(0.001)VNGS(0.003)S(0.003)AT(0.009)S(0.447)S(0.536)G 44.309 0.049669 74010000.0 393.86 420.15 294.58 436.86 567.9 499.02 320.11 598.0 562.52 542.59 559.08 True False 433.8443772555926 455.55751501655317 314.5719702534433 463.8438500189546 528.0126631486423 494.95614656955377 332.2919612209132 586.0724208780753 538.8792406159937 508.3307748010113 490.3167043001215 0.8848247947719065 0.9291086985641583 0.6415689441020852 0.9460086632802889 1.076880837462652 1.0094621338182932 0.6777088324886402 1.1952936045991653 1.0990432018529541 1.0367396630441197 1.0 8.937570102531163 -7.0938239844844 0.6634904571136372 1.0469644336528792 0.8321045010345016 0.21222021133611924 0.14307018282358944 0.9125638808617453 0.7422398973119324 0.028231602991096914 0.09418033522168158 8.057049197480536e-08 7.0938239844844 -0.21485993261837755 KSSVT(ph)EE ddPTM_A549_MK2206_60min_R1 1 KSSVTEE 7 1 O94874;O94874-2 O94874 UFL1 E3 UFM1-protein ligase 1 1 KSS(0.004)VT(0.996)EE 79.906 0.049569999999999996 135380000.0 10898.0 9948.8 7172.4 6398.8 2085.7 2188.2 2076.1 1962.7 2037.9 13154.0 14072.0 True False 12737.315969481053 10455.15142523944 8189.554170570513 7966.506287253047 1778.8962929100821 2419.753871590396 2453.3004965263185 2240.9187355166623 1576.3189038575827 10182.502264150244 10577.534032557589 1.2041857705468655 0.9884299490844033 0.7742403990725165 0.7531534536057446 0.1681768441902101 0.22876351559280336 0.231935013300366 0.21185644296857162 0.14902517912073665 0.9626536991333292 1.0 13.368715707032706 -5.937235215092211 1.4488370045683512 0.4832596559769538 1.17436638876435 0.4242317259572497 0.2960594592974551 0.4878847761172772 1.7567405268021268 0.05481810552212496 0.33675149667895005 1.1554862581377586e-06 5.937235215092211 0.6911067327873963 KSSVT(ph)EE ddPTM_A549_PD325901_60min_R1 1 KSSVTEE 7 1 O94874;O94874-2 O94874 UFL1 E3 UFM1-protein ligase 1 1 KS(0.003)S(0.123)VT(0.874)EE 78.334 0.051761 517250000.0 13002.0 12556.0 12053.0 10701.0 13539.0 11247.0 9509.0 11090.0 12164.0 13905.0 15458.0 True False 14321.953468433492 13614.138185285836 12870.989060576936 11361.976466265698 12588.067347014374 11155.40816093097 9870.87019852446 10868.801250063307 11652.789381449456 13027.035926957848 13556.763996335547 1.0564433719068045 1.0042321448515146 0.9494145552770573 0.83810387710053 0.9285451417769746 0.8228665899875757 0.7281140396921124 0.8017253419032146 0.8595553765337551 0.9609251832132737 1.0 13.726725227375566 -5.778241542228081 2.2926551252993637 0.8948035043218275 1.046810842606107 0.3806795255644735 0.07604075843278212 0.3484578677054906 3.4949199115583824 0.013312519142411085 0.06945755156251945 1.6663201949260927e-06 5.778241542228081 0.15200733828427937 KSTLT(ph)PTQR ddPTM_A549_PD325901_60min_R1 2 KSTLTPTQR 9 1 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 KS(0.02)T(0.064)LT(0.658)PT(0.258)QR;KST(0.004)LT(0.962)PT(0.033)QR 83.137 0.00089983 52328000.0 11523.0 11343.0 10849.9 12380.4 13839.5 14259.0 12926.7 12467.8 10937.900000000001 10598.6 11794.599999999999 True False 12692.80647721575 12298.914418261966 11586.239459748915 13145.109190071567 12867.461263683095 14142.879431556385 13418.632642261651 12219.119948200107 10478.218100571848 9929.402587231614 10343.938972129596 1.227076697901532 1.188997194531 1.1200993635951002 1.2708030495432505 1.2439614443156328 1.3672624586883722 1.2972459213474112 1.1812830664530158 1.0129814308460299 0.9599247070178105 1.0 13.336498048125634 -8.683574144782721 3.4656467262586212 1.0050918107652784 1.243631133454874 0.7720955441446294 0.06015536082415103 0.08497939609229618 2.022234875126623 0.011072652421741491 0.012389045593409274 2.0721722584541996e-09 8.683574144782721 0.23853932268959555 KSVAAEGALLPQTPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KSVAAEGALLPQTPPSPR 18 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 KSVAAEGALLPQT(0.408)PPS(0.592)PR;KSVAAEGALLPQT(0.349)PPS(0.651)PR 98.96700000000001 3.1706e-07 21770000.0 4008.6 4507.5 4502.5 4702.9 5786.6 4747.8 5031.6 5306.1 5031.2 5963.200000000001 5974.3 True False 4415.550121024649 4887.362844072626 4808.066725731989 4993.387451939159 5380.169178686271 4709.135490928073 5223.0802913971675 5200.265672945076 4819.756160469294 5586.6825343139235 5239.498974208016 0.8427428162044994 0.9327920223157181 0.917657728229398 0.953027660949956 1.0268480259602528 0.8987759161914692 0.9968663639611972 0.9925120127981569 0.9198887497058497 1.0662627403526472 1.0 12.355213145664422 -3.9169068398085822 0.781999750495457 0.9654207644101787 2.769063852729497e-13 0.4040661248246622 0.04738785538318559 11.82306833444273 1.007394243695525 0.006179334570041583 16.06778044223284 0.00012108578459243353 3.9169068398085822 -0.9654207644099018 KSVAEGLSGS(ph)LVQEPFQLATEK ddPTM_A549_MK2206_60min_R1 1 KSVAEGLSGSLVQEPFQLATEK 22 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KSVAEGLS(0.065)GS(0.935)LVQEPFQLATEK 133.46 2.8788999999999996e-22 5056500.0 2101.0 2354.5 2451.5 2260.4 3507.9 2764.3 2184.9 2572.6 4458.3 3592.0 3156.6 True False 2455.5974354817104 2474.333993117388 2799.1595629292297 2814.1981014732105 2991.892556887032 3056.8163912061655 2581.8680481963097 2937.273928257076 3448.502168442152 2780.5647052476543 2372.7291022719783 1.0349253242312333 1.0428219516286623 1.1797215115071198 1.1860595879986926 1.2609499137605642 1.2883124281988818 1.0881427828082324 1.237930586110536 1.4533905978310293 1.1718846043508118 1.0 11.212331680129328 -5.822508648369336 2.406254509620209 1.2181147391048472 1.0274931269859628 0.2637089326937492 0.10886841962319155 0.436636645165498 4.909727840326508 0.022720011456376983 0.10707300390610731 1.5048435516420894e-06 5.822508648369336 -0.1906216121188844 KSVAEGLSGS(ph)LVQEPFQLATEK ddPTM_A549_PD325901_60min_R1 2 KSVAEGLSGSLVQEPFQLATEK 22 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KSVAEGLS(0.045)GS(0.955)LVQEPFQLATEK;KSVAEGLS(0.048)GS(0.952)LVQEPFQLATEK 161.0 3.4709e-33 20557400.0 7230.6 7353.9 8799.6 8187.5 10045.599999999999 9494.8 8733.2 9992.7 8952.7 8134.799999999999 9090.1 True False 7964.6451891136185 7973.638961514296 9396.793772293442 8693.223279838367 9340.031711438625 9417.477496790903 9065.546704990407 9793.3877593785 8576.449152852889 7621.167339706346 7972.075326891561 0.9990679794817192 1.0001961389674103 1.1787136206046613 1.090459249740681 1.1715935096514514 1.1813081425640426 1.1371627002081035 1.2284615182126104 1.0758113541555034 0.9559828560573774 1.0 12.960739626703017 -9.540201830112608 1.3682960144223268 1.0183137894027576 1.122925202170615 0.33395644175682104 0.07248819998322044 0.3596604415541344 1.377454348325164 0.018208788601824875 0.01403795464223513 2.8826915156482845e-10 9.540201830112608 0.10461141276785746 KSVS(ph)NGALR ddPTM_A549_MK2206_60min_R1 4 KSVSNGALR 9 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 KS(0.012)VS(0.988)NGALR;KS(0.402)VS(0.598)NGALR;KS(0.007)VS(0.993)NGALR;KS(0.039)VS(0.961)NGALR 110.38 0.00015226 170605400.0 11320.6 12079.1 12119.9 11868.5 15283.8 11903.4 10546.7 10903.5 17215.6 15858.4 16349.3 True False 13231.240517903028 12693.874595992456 13838.684065570462 14776.283032797217 13035.573266327427 13163.009887162576 12462.89887130396 12449.104515568315 13316.294087664064 12275.976425862864 12289.317592275003 1.0766456655184917 1.032919403431461 1.1260742479524968 1.2023680665625816 1.0607239310441057 1.0710936378954654 1.0141245661303495 1.013002098944351 1.0835666006414069 0.9989144095014254 1.0 13.58511718675113 -7.245532325038653 2.5767232446720034 1.0370570899058569 1.105692087360848 0.37348072710824665 0.04648226507587285 0.2958446073293547 3.8789521460390994 0.007772863955139959 0.01386255069987785 5.681561014728513e-08 7.245532325038653 0.06863499745499113 KSVS(ph)NGALR ddPTM_A549_PD325901_60min_R1 3 KSVSNGALR 9 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 KS(0.003)VS(0.997)NGALR;KS(0.041)VS(0.959)NGALR;KS(0.091)VS(0.909)NGALR 86.803 0.00048728 172497000.0 15824.2 14921.2 15883.400000000001 14845.400000000001 16988.9 16720.1 16261.599999999999 17603.3 15318.1 15959.599999999999 18495.8 True False 17430.661134839665 16178.661889955945 16961.3430386433 15762.36664165039 15795.65827252327 16583.93704913149 16880.44408668896 17252.188371978304 14674.333527127661 14951.908132317616 16220.933854536363 1.0745781525990865 0.9973939869948613 1.045645287179312 0.9717299129015479 0.973782299722888 1.022378686569492 1.0406579693910878 1.063575533116026 0.9046540512847121 0.9217661736618297 1.0 13.985569258816476 -8.757489307125896 24.999957790916266 0.9549755248789501 1.0206937849445634 0.4571242938700365 0.038811563062541146 91.53978661198055 579353.2312869815 0.0077429989903644225 0.008622075460549019 1.7478762967921018e-09 8.757489307125896 0.06571826006561332 KSVS(ph)SPTSSNTPTPTK ddPTM_A549_MK2206_60min_R1 1 KSVSSPTSSNTPTPTK 16 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 KS(0.098)VS(0.524)S(0.372)PT(0.005)S(0.001)SNTPTPTK 116.21 6.836800000000001e-08 7501800.0 1032.5 1002.1 953.5 1165.8 1047.3 1133.7 1007.4 1022.6 1865.5 1609.0 1903.2 True False 1206.7607577986037 1053.1026096848311 1088.7206376720458 1451.4210523347515 893.2435573499209 1253.6673815108456 1190.431540003186 1167.556681581157 1442.9672285913541 1245.525782500968 1430.5829143521605 0.8435447856198431 0.7361353187709002 0.7610328815964316 1.0145661868134555 0.6243913221586505 0.8763332547408264 0.832130405067974 0.8161405185730776 1.008656830802989 0.8706421487390714 1.0 10.482387401098517 -8.758135827331774 12.176125435151864 1.0040987749432237 0.8118948542352828 0.2755219641151495 0.0990818500483001 0.10005421930498096 328.68001956145713 0.0142059691240195 0.015693951816324776 1.7452762254524048e-09 8.758135827331774 -0.1922039207079409 KSVS(ph)TPPR ddPTM_A549_MK2206_60min_R1 1 KSVSTPPR 8 1 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 KS(0.001)VS(0.499)T(0.499)PPR 42.743 0.031851 4080100.0 1917.5 2411.8 2265.0 1690.1 2542.6 2466.4 1987.8 1861.7 3669.6 3311.3 3043.3 True False 2241.127121625977 2534.550318369298 2586.21105854975 2104.174575871472 2168.586908161852 2727.3928109361827 2348.957529500033 2125.6016762171334 2838.441459147057 2563.275030202272 2287.564619192903 0.9797000280659568 1.1079688403571901 1.1305521325391958 0.9198317539173452 0.9479893551278002 1.1922691879622003 1.0268376726025736 0.9291985277194428 1.2408136737787603 1.120525736714115 1.0 11.159596781926489 -8.751553806039281 24.9997693380968 1.1137175743365737 1.0342830695109748 0.14680415000616331 0.09695905965666012 387.2278789667825 979265.7407508155 0.019677406708852492 0.022185828341037283 1.7719285020259901e-09 8.751553806039281 -0.07943450482559888 KSVSS(ph)PTSSNTPTPTK ddPTM_A549_MK2206_60min_R1 1 KSVSSPTSSNTPTPTK 16 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 KS(0.109)VS(0.427)S(0.452)PT(0.012)SSNTPTPTK 128.38 2.3153999999999998e-10 6617400.0 873.83 1047.4 988.99 844.41 1316.1 815.28 1148.4 908.84 1292.5 1699.7 1416.1 True False 1021.3111409076549 1100.7081861928873 1129.2436533311766 1051.2904879070059 1122.503433427128 901.5523884609356 1357.0494148696237 1037.6708532057685 999.7508136983788 1315.7365895070823 1064.4432876282544 0.9594791500665999 1.0340693571805377 1.060877236444703 0.9876434941399695 1.0545450814277204 0.8469708052457495 1.2748912324801647 0.9748484163189763 0.9392241233687324 1.2360795589577613 1.0 10.05588337128927 -8.478029100270865 24.99954363119805 0.9705492923845485 1.0317597737488042 0.0 0.1258273953899946 852.6029934605654 475248.3045397825 0.014896136546208466 0.018008106893234156 3.3263726390467833e-09 8.478029100270865 0.061210481364255775 KSVSS(ph)PTSSNTPTPTK ddPTM_A549_PD325901_60min_R1 1 KSVSSPTSSNTPTPTK 16 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 KS(0.036)VS(0.165)S(0.76)PT(0.036)S(0.002)SNTPTPTK 108.71 2.5694e-07 24463000.0 3307.8 3183.9 3339.1 3353.4 4018.1 4199.8 3948.6 3576.3 3563.3 3680.9 3079.4 True False 3643.6054209263434 3452.2184268980236 3565.711405639464 3560.5319018760265 3735.8825176924793 4165.598221239251 4098.86613375683 3504.9678909469253 3413.5468927095403 3448.4873458136767 2700.6533219249395 1.3491570322433306 1.2782901081273892 1.3203143760406606 1.3183965053827023 1.3833254669761395 1.5424409299117836 1.517731320966176 1.2978222204576395 1.2639707825499324 1.2769085605388644 1.0 11.399092740192035 -9.81458297116799 0.7181716837216001 1.0214205954222078 1.378428467760008 0.32711121001467713 0.11143411217103881 0.2600512844028605 0.2800106723279976 0.042884732074195554 0.02103632240933422 1.5325583859103814e-10 9.81458297116799 0.3570078723378003 KSVSSPTSSNT(ph)PTPTK ddPTM_A549_MK2206_60min_R1 2 KSVSSPTSSNTPTPTK 16 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 KSVSSPTS(0.001)S(0.005)NT(0.99)PT(0.003)PTK;KSVSSPTSS(0.001)NT(0.907)PT(0.091)PT(0.001)K 101.64 7.4259e-07 9086600.0 1411.24 1519.19 1331.23 1208.82 1857.69 1726.7800000000002 1673.3899999999999 1444.8899999999999 2017.93 2122.7 2121.37 True False 1649.4228104946249 1596.510282014866 1520.0184315554889 1504.9809542659914 1584.4262618670623 1909.5067134562044 1977.4233022889928 1649.7075822900433 1560.8720769720446 1643.180595720824 1594.57528216648 1.034396324175818 1.0012134891779816 0.9532434426616133 0.9438130460803577 0.9936352830669564 1.1975017641448955 1.2400940390862911 1.03457491204094 0.9788638356737573 1.0304816674997659 1.0 10.638956495544459 -4.879530822580104 15.024912809739178 1.0168218915731928 2.169446078976767 0.0 0.0928708630367261 6386613.579525547 5636219.405594058 0.013791061843402497 249016733.06862915 1.3196816484475737e-05 4.879530822580104 1.1526241874035743 KSVSSPTSSNT(ph)PTPTK ddPTM_A549_PD325901_60min_R1 1 KSVSSPTSSNTPTPTK 16 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 KS(0.001)VS(0.001)S(0.001)PT(0.006)S(0.009)S(0.038)NT(0.895)PT(0.038)PT(0.01)K 43.12 0.029911 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KSVYRGS(ph)LTQR ddPTM_A549_MK2206_60min_R1 2 KSVYRGSLTQR 11 2 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 KSVYRGS(0.994)LT(0.006)QR;KS(0.198)VY(0.015)RGS(0.766)LT(0.021)QR 95.854 5.8251e-05 28977000.0 3739.5 4473.4 4622.7 3964.7 6144.1 4307.200000000001 4132.0 4141.3 6597.5 6992.400000000001 5946.9 True False 4370.636178002788 4701.076952563739 5278.268371018951 4936.051677982144 5240.311029040056 4762.9850451120365 4882.730914525675 4728.341957199341 5103.176784042593 5412.811983567293 4470.120603909658 0.9777445767749849 1.0516666929415912 1.1807888061012204 1.1042323273481645 1.1722974598172529 1.065516004410761 1.0923040667527268 1.0577660819853132 1.1416194855188586 1.210887236204128 1.0 12.126098040525974 -10.962305935166512 1.1845509744813834 0.999122827545404 1.1001053142414452 0.0 0.08332531177760781 0.49349397334203476 1.2133459586059459 0.04117078758969378 0.00920307447044067 1.0906717510475518e-11 10.962305935166512 0.10098248669604115 KSVYRGS(ph)LTQR ddPTM_A549_PD325901_60min_R1 1 KSVYRGSLTQR 11 2 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 KS(0.001)VY(0.002)RGS(0.993)LT(0.003)QR 48.177 0.0063207 11811000.0 1886.8 2636.8 2407.1 2283.7 3111.6 2934.2 2324.8 2252.1 2602.4 3021.8 2588.3 True False 2078.346547011252 2859.012389850406 2570.460281068178 2424.7589623409935 2893.0519504372496 2910.3048480309108 2413.271536179375 2207.1800987617285 2493.0301780897785 2831.0030322963867 2269.955508585543 0.9155891113946604 1.259501509627348 1.132383551724274 1.0681966907148377 1.2744972046786816 1.2820977490631007 1.0631360513683086 0.9723450924097929 1.0982727056369654 1.247162343750272 1.0 11.148448305450508 -7.973931843347283 24.841111821080627 1.0409862996019907 1.1615254668507664 0.06561649350726206 0.12027452761715553 225.60171782963565 214981.86500392546 0.015669873972448338 0.021650671836085603 1.061862189050578e-08 7.973931843347283 0.12053916724877567 KSYES(ph)SEDCSEAAGSPAR ddPTM_A549_MK2206_60min_R1 1 KSYESSEDCSEAAGSPAR 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KS(0.159)YES(0.644)S(0.197)EDCSEAAGSPAR 54.728 0.0046721 10135000.0 1352.7 1015.1 1299.1 1165.8 1823.1 1345.1 961.74 1199.5 1860.3 1668.5 1904.6 True False 1581.002689660214 1066.7642541573414 1483.331914420299 1451.4210523347515 1554.9244050459668 1487.437589194883 1136.4757090357991 1369.5327983146865 1438.9450202886605 1291.5846911764231 1431.6352557141256 1.1043334420201751 0.7451368984519874 1.0361102162718019 1.0138204172757372 1.0861177096888008 1.0389780380568527 0.7938304847549347 0.9566213131790602 1.0051058847184429 0.902174409313605 1.0 10.483448262040927 KSYESSEDCSEAAGS(ph)PARK ddPTM_A549_PD325901_60min_R1 2 KSYESSEDCSEAAGSPARK 19 2 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KSYESSEDCSEAAGS(1)PARK;KSYESSEDCSEAAGS(1)PARK 104.53 3.6224e-10 31552000.0 6707.1 5832.9 6428.700000000001 5835.3 6292.5 6057.700000000001 5987.0 6626.200000000001 4871.6 6302.3 7215.0 True False 7387.9998544939435 6324.458953564334 6864.990240913547 6195.733228072164 5850.536507946522 6008.3680996240355 6214.8385612121065 6494.03524284666 4666.863593445346 5904.3717024427515 6327.600739653316 1.167583126444025 0.9995034790881647 1.0849278460147713 0.9791599506658543 0.9246058259148424 0.9495491809353998 0.9821793151810986 1.0263029400939199 0.7375407813263893 0.9331138207633257 1.0 12.627442855854834 -5.893323831521835 0.5142722141477604 0.890038583354641 1.1972695661039814 0.37003271170360985 0.08083818701854477 2.116680239825897 0.5477528186310932 0.021860806074516275 0.34452366180880584 1.2784276895306681e-06 5.893323831521835 0.30723098274934035 KSYS(ph)GGTR ddPTM_A549_PD325901_60min_R1 1 KSYSGGTR 8 1 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 KS(0.002)YS(0.849)GGT(0.149)R 57.836000000000006 0.006635200000000001 28034000.0 5597.2 6295.2 5912.7 5112.2 6490.7 6224.0 5142.2 5832.3 5771.9 6872.0 7310.2 True False 6165.423623559141 6825.718597006317 6313.971377953473 5427.968983351411 6034.815623699403 6173.313807560627 5337.88923491981 5715.970201149163 5529.327115322927 6438.1007472171395 6411.091743175844 0.9616807667932377 1.0646733614866475 0.9848511970951361 0.846652832433587 0.9413085735550484 0.9629114751214852 0.8326022226404134 0.8915751684934802 0.8624626408144146 1.0042128556450693 1.0 12.646354338596659 -6.0130518426511905 23.882417321951507 0.9208513727888065 1.016073385267803 0.3022603733595185 0.0589925896503617 327.60266952875395 599458.0548448771 0.008924182778888425 0.024931637502278933 9.70394122331746e-07 6.0130518426511905 0.09522201247899653 KSYS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KSYSPR 6 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 KS(0.01)Y(0.038)S(0.952)PR;KS(0.053)Y(0.016)S(0.931)PR 51.346000000000004 0.039151 229634000.0 3635.3999999999996 3254.2 2854.6 2658.3999999999996 4013.2999999999997 3179.3 2774.2 2990.3999999999996 3930.2 4079.2000000000003 4467.8 True False 4248.966643003431 3419.8248801879804 3259.425204298504 3309.708119340109 3422.948886386363 3515.73141575146 3278.236230173553 3414.2983577159116 3040.015975239741 3157.7058868725608 3358.32195499295 1.2652052721408453 1.0183135881607752 0.9705517362480949 0.9855243671380093 1.019243816483208 1.0468714622564652 0.9761530532531789 1.016667967953382 0.9052187419732134 0.9402630031280577 1.0 11.713524829590552 -5.247151304719509 2.8297840458338817 0.9731425287393077 1.32395271118821 0.8126339859628999 0.03823483600820132 0.16272361880492522 1.7368640058744866 0.006575624889399565 0.1330982281459742 5.6604205016481706e-06 5.247151304719509 0.35081018244890216 KSYS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KSYSPR 6 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 KS(0.002)Y(0.011)S(0.987)PR;KS(0.003)Y(0.015)S(0.982)PR 61.961999999999996 0.025866000000000004 274220000.0 4995.0 5318.200000000001 5174.6 5096.6 5018.5 4921.5 4528.3 4536.6 4671.9 4981.3 5936.299999999999 True False 5502.08872287535 5766.383378224521 5525.779473397613 5411.405406781585 4666.017872885119 4881.420935718127 4700.626934480839 4446.11395410615 4475.556289969884 4666.779867886024 5206.172733306166 1.0568394490017743 1.107605082200681 1.0613899608145505 1.0394210265369137 0.8962472264960707 0.9376217781806471 0.902894924021416 0.8540081518353037 0.8596634263280953 0.8963935902530835 1.0 12.346007463739895 -6.6463925043298255 4.135670788478685 0.9219667065918071 1.0748342676088811 0.776725214485537 0.040866753344568685 0.11743800098206929 3.6366504259601675 0.00834539561586779 0.017906544697902673 2.257394672004375e-07 6.6463925043298255 0.152867561017074 KSYT(ph)TPK ddPTM_A549_MK2206_60min_R1 1 KSYTTPK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 KS(0.014)Y(0.003)T(0.668)T(0.316)PK 45.997 0.040760000000000005 6740000.0 1930.9 2141.2 1847.1 1687.2 3065.7 2096.2 2107.4 2297.4 2953.8 2723.5 2906.8 True False 2256.7887140274333 2250.1779341953484 2109.046554634544 2100.5640757412857 2614.739591108233 2318.018492655053 2490.2873013725566 2623.063485492424 2284.7690162493373 2108.259458447103 2184.9613364012507 1.0328735234027007 1.029847941337723 0.9652557779847297 0.9613735679190681 1.1966983339919646 1.0608968012555107 1.139739756436237 1.2005079640506369 1.0456793803099853 0.9648955445223211 1.0 11.093392035657665 KSYTT(ph)PK ddPTM_A549_MK2206_60min_R1 1 KSYTTPK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 KS(0.002)Y(0.004)T(0.023)T(0.971)PK 54.416000000000004 0.026255 7114700.0 2240.7 2515.1 2542.8 2251.5 3243.0 2535.1 2721.4 2664.6 3628.0 4047.8 3617.7 True False 2618.875380144631 2643.1078471393266 2903.407275797043 2803.117601073677 2765.958995976122 2803.3625993368128 3215.8431536278254 3042.315209995261 2806.2637927255064 3133.3991686808095 2719.3252465593787 0.9630607384895051 0.9719719443209355 1.0676940095601193 1.0308136566673356 1.0171490149902982 1.0309037519082214 1.182588643155748 1.118775774925984 1.031970631786737 1.152270833599378 1.0 11.409033000767606 -5.7050417266145 8.632284984415277 1.0383088115501056 0.9668172068161651 0.15764533665741165 0.06270118131083074 0.3894172209938306 53.85734837823552 0.008141919878698275 0.0316053756475428 1.9722332366555677e-06 5.7050417266145 -0.07149160473394045 KSYTT(ph)PK ddPTM_A549_PD325901_60min_R1 2 KSYTTPK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 KS(0.003)YT(0.196)T(0.801)PK;KSYT(0.094)T(0.906)PK 66.27 0.015066 25493000.0 9134.7 8838.8 8465.1 8416.7 11631.599999999999 9081.9 9349.1 9535.7 10335.9 10302.2 10663.7 True False 10062.048019389278 9583.676695771299 9039.592590781534 8936.580443287401 10814.636542841601 9007.940017494351 9704.885116523823 9345.502982888062 9901.518067060457 9651.717333815544 9352.132502763843 1.0759094801549949 1.0247584380288697 0.966580893513865 0.9555660637449658 1.1563818775712964 0.9631963634852508 1.0377189495182761 0.9992911221185304 1.0587444162210333 1.0320338522752073 1.0 13.191079655049844 KT(ph)EGTPNQGK ddPTM_A549_MK2206_60min_R1 2 KTEGTPNQGK 10 1 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KT(0.5)EGT(0.5)PNQGK;KT(0.5)EGT(0.5)PNQGK 45.915 0.025263999999999998 5641500.0 2525.0 2117.8 1843.38 1729.69 2052.3999999999996 1713.66 1770.56 1969.1599999999999 1971.9299999999998 3465.8 3810.6 True False 2951.1582696769715 2225.5869741448305 2104.799002697324 2153.4641276487346 1750.494678797839 1894.9983637645544 2092.2478335001397 2248.294460299582 1525.2910035251398 2682.8733728973634 2864.322852790218 1.0303162113175073 0.7770028340125218 0.734833016692577 0.7518231143360757 0.6111373503488382 0.6615868605449218 0.7304511191753478 0.7849305318740362 0.5325136452545183 0.9366518757771669 1.0 11.483978400123284 -11.071356520237078 1.4009443316783052 0.9993240632176239 0.7075118317674605 0.3337315394113489 0.12172618932403612 0.3398193853688495 1.194982755047217 0.09209636538480433 0.020540762824302863 8.484836533994073e-12 11.071356520237078 -0.29181223145016344 KT(ph)EMDKSPFNSPSPQDSPR ddPTM_A549_MK2206_60min_R1 1 KTEMDKSPFNSPSPQDSPR 19 2 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 KT(0.499)EMDKS(0.499)PFNS(0.001)PSPQDSPR 47.751999999999995 0.0098621 6766100.0 752.7 968.62 556.08 587.86 1255.1 680.64 606.94 545.81 1263.4 1009.5 1101.5 True False 879.7373582518247 1017.9186206894732 634.9405057122934 731.8857263900386 1070.4764526209156 752.6648730277338 717.2131416413871 623.1802389730209 977.2419172352268 781.4532488718005 827.9671501465452 1.062526886599446 1.229419090490858 0.7668667840262898 0.8839550292067737 1.2928972513359347 0.9090516126086846 0.8662338131584625 0.7526629998094994 1.1802906879364246 0.9438215619224603 1.0 9.693429719261628 KT(ph)ESFQNAQAGSNPK ddPTM_A549_MK2206_60min_R1 1 KTESFQNAQAGSNPK 15 1 Q92667;I3NI36;I3L0W0 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 KT(0.5)ES(0.5)FQNAQAGSNPK 66.827 0.00083031 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KT(ph)ESFQNAQAGSNPK ddPTM_A549_PD325901_60min_R1 2 KTESFQNAQAGSNPK 15 1 Q92667;I3NI36;I3L0W0 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 KT(0.5)ES(0.5)FQNAQAGSNPK;KT(0.589)ES(0.411)FQNAQAGSNPK 89.04899999999999 2.1921e-05 6108800.0 3118.7400000000002 3004.8 3075.2 2676.91 4385.0 3679.1 3106.1400000000003 3153.4300000000003 3543.13 3629.2999999999997 3743.2 True False 3435.352188904957 3258.025041346518 3283.901564679847 2842.2566509962912 4077.012727428765 3649.1386294017193 3224.3458574450265 3090.532364832021 3394.224567666476 3400.145378619786 3282.810130099835 1.0464669148564139 0.9924500389084142 1.0003324696027969 0.8657998904462544 1.2419276674112059 1.1115899137580472 0.9821907846211531 0.9414289107052418 1.0339387394187347 1.0357423194975892 1.0 11.680715594949223 -11.942341078393193 0.43854010889719736 0.9754906773681863 1.0257012397067236 0.0 0.09150670506421688 32.80126433620073 3.920083152123733 0.876002463500167 0.02288990724159204 1.1419811139156255e-12 11.942341078393193 0.05021056233853727 KT(ph)ETQEKNPLPSK ddPTM_A549_MK2206_60min_R1 3 KTETQEKNPLPSK 13 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 KT(0.616)ET(0.384)QEKNPLPSK;KT(0.5)ET(0.5)QEKNPLPSK;KT(0.5)ET(0.5)QEKNPLPSK 80.07 0.00024636 29313200.0 3864.97 4860.110000000001 4821.610000000001 4537.48 5694.400000000001 5296.9 4840.9 5630.0 5966.0 6808.699999999999 5958.099999999999 True False 4517.282446555804 5107.468839791781 5505.386800006205 5649.162803695216 4856.761303326068 5857.414442202344 5720.428868375441 6428.069741151881 4614.710525744315 5270.609941152483 4478.539334805382 1.0086508365460423 1.1404318368041595 1.2292817788202914 1.2613851037976211 1.0844520814144243 1.307885005425967 1.277297895748866 1.4353049645440297 1.0304052684947225 1.176859138021062 1.0 12.128812562025344 -8.958126734090062 24.948773487386585 1.0134139286970325 1.218766149542571 0.20235115478591015 0.11885950302729346 95.37678237857912 56827.27923016045 0.018782739237985135 0.019977830936772346 1.1012179096141215e-09 8.958126734090062 0.2053522208455385 KT(ph)ETQEKNPLPSK ddPTM_A549_PD325901_60min_R1 1 KTETQEKNPLPSK 13 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 KT(0.5)ET(0.5)QEKNPLPSK 73.707 0.00225 2876800.0 1300.5 1689.6 1475.1 1016.8 2078.8 1613.7 1744.4 1636.1 1588.6 1861.9 1717.3 True False 1432.5258026225 1831.9885216517152 1575.209156496892 1079.6054266796525 1932.7922594706777 1600.558562220529 1810.7840965723076 1603.4667020043792 1521.8366665053109 1744.3393162461584 1506.0829868616281 0.9511599394715915 1.2163928134326836 1.0458979818763565 0.7168299729149266 1.2833238781205711 1.062729329116033 1.2023136257223215 1.0646602584268474 1.0104600342617973 1.1581960167288048 1.0 10.556585550976832 -8.759261902788397 5.236663876433236 1.0046979819842654 1.0721696926737574 0.0 0.15003578007179924 0.4761639414726081 37.78885282074301 0.023698010199186454 0.025995687414034525 1.7407567873970918e-09 8.759261902788397 0.06747171068949198 KT(ph)GSPGSPGAGGVQSTAK ddPTM_A549_MK2206_60min_R1 2 KTGSPGSPGAGGVQSTAK 18 1 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 KT(0.452)GS(0.452)PGS(0.097)PGAGGVQSTAK;KT(0.521)GS(0.398)PGS(0.081)PGAGGVQSTAK 108.4 2.2208000000000004e-09 48613000.0 2016.52 1969.76 2326.3599999999997 2120.7 2726.9 1871.97 2546.7 2010.63 3157.6 3539.3 3867.6 True False 2356.859276819409 2070.012370474795 2656.272829213153 2640.2715952018416 2325.776622302588 2070.060622886883 3009.4024249812524 2295.6429597961305 2442.408641651062 2739.7696718493944 2907.168179670249 0.8107062031363937 0.7120373650724223 0.9136976827788633 0.908193620742409 0.8000144740736648 0.7120539628091564 1.0351662645546014 0.7896491767657274 0.8401332467556442 0.9424187052570717 1.0 11.505398818454085 -14.999999999999924 0.20409944676666752 1.804593687734857 0.8084873302377288 0.24887152013306135 0.08954824405985169 39.368166657969994 0.4679176486243989 12.62569716990323 0.0699983835568604 1.0000000000001758e-15 14.999999999999924 -0.9961063574971282 KT(ph)GSPGSPGAGGVQSTAK ddPTM_A549_PD325901_60min_R1 1 KTGSPGSPGAGGVQSTAK 18 1 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 KT(0.43)GS(0.43)PGS(0.139)PGAGGVQSTAK 83.87100000000001 8.1262e-05 58034000.0 1731.5 1599.6 1406.8 1518.0 1594.5 1575.3 1474.3 1749.6 1773.8 1512.0 1756.1 True False 1907.28060533707 1734.4039057966884 1502.273907775627 1611.7634123718647 1482.507820726378 1562.4712790890512 1530.405293267916 1714.702855465352 1699.2533545556594 1416.532061960465 1540.1108328350936 1.2384047723539977 1.1261552537773745 0.9754323362625696 1.0465243007250786 0.9625981384711918 1.0145187253912082 0.9936981551195824 1.1133632845818395 1.1033318630891067 0.9197598197221039 1.0 10.588818461704312 -5.460071532648803 3.4706383141605177 1.0385124173726925 1.2326787372479149 0.547752208700518 0.05910531898861531 0.14322480531555046 3.1242243699091103 0.007567866973196551 0.05394346037305584 3.4667974412527084e-06 5.460071532648803 0.19416631987522237 KT(ph)GSYGALAEITASK ddPTM_A549_MK2206_60min_R1 2 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KT(0.5)GS(0.5)YGALAEITASK;KT(0.496)GS(0.496)Y(0.008)GALAEITASK 121.26 3.1756e-07 491866880.0 4867.4400000000005 5460.5 5318.1 5508.889999999999 7233.6 6050.4 5451.429999999999 5438.42 9423.699999999999 8164.4 8586.5 True False 5688.9448745174195 5738.416126318746 6072.286547670386 6858.568297303468 6169.5470222919785 6690.649312069528 6441.884266547117 6209.332689462741 7289.2469965566015 6320.05636957794 6454.23507465575 0.881428210890018 0.889093139611872 0.9408220304083461 1.0626461878085969 0.9558912792808439 1.036629319304176 0.9980864024991695 0.9620555523063169 1.1293742654617192 0.9792107502243452 1.0 12.656030408948665 -5.391927543702292 0.49159233815580955 1.0521721769725116 0.749189754671228 0.3874269180098151 0.05443968421020077 2.388068800997235 0.41225781169741005 0.012284179620305171 0.4057574663068787 4.0557619483504e-06 5.391927543702292 -0.3029824223012837 KT(ph)GSYGALAEITASK ddPTM_A549_PD325901_60min_R1 4 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KT(0.496)GS(0.496)Y(0.006)GALAEIT(0.002)ASK;KT(0.582)GS(0.418)YGALAEITASK;KT(0.497)GS(0.497)Y(0.006)GALAEITASK;KT(0.5)GS(0.5)Y(0.001)GALAEITASK 119.79 3.9689999999999996e-07 886743600.0 19088.199999999997 18159.1 18923.5 20156.7 21917.000000000004 21128.5 19979.199999999997 21563.7 26412.3 21426.899999999998 21859.699999999997 True False 21026.020012009867 19689.431086366985 20207.762506249695 21401.733579812884 20377.625529545323 20956.436501131844 20739.519389037745 21133.5950871046 25302.282882247393 20074.00187726236 19171.09548005539 1.0967563138937075 1.0270373493706106 1.0540744803693038 1.116354232447391 1.062934851623119 1.0931267085354526 1.0818119084855666 1.102367629908833 1.3198141393938896 1.0470972771559302 1.0 14.226645157791161 -8.534775619577736 24.958462756058765 1.1541847852050926 1.0762140765671229 0.022835434210814354 0.07868764708515856 420.95156347017274 883112.0497556946 0.01915194846616278 0.021724807602393776 2.9189347067451713e-09 8.534775619577736 -0.07797070863796973 KT(ph)KFASDDEHDEHDENGATGPVK ddPTM_A549_PD325901_60min_R1 1 KTKFASDDEHDEHDENGATGPVK 23 2 P05455 P05455 SSB Lupus La protein 1 KT(0.5)KFAS(0.5)DDEHDEHDENGATGPVK 104.87 2.0905e-10 17831000.0 1004.2 657.73 783.68 740.25 1256.4 1464.1 1136.1 1082.7 1389.0 767.47 999.53 True False 1106.1456447470327 713.1592154036362 836.8652374506709 785.9735612702717 1168.1547983446972 1452.176855020807 1179.334907197775 1061.104699138281 1330.6251603776127 719.0118132227504 876.5941465427138 1.2618674777942218 0.8135568988411971 0.954678103602752 0.896621959398372 1.3326062043100542 1.656612539278514 1.3453602352343674 1.2104857228664787 1.5179489455018569 0.8202334182341191 1.0 9.77576523507353 -6.764693850100635 24.99919099344455 1.2917448898724015 0.96774343013038 0.2496960336724745 0.2371025121527307 82.31593503292021 632316.7019637406 0.03434341116640293 0.06686000204353616 1.7191198299032834e-07 6.764693850100635 -0.32400145974202155 KT(ph)KFASDDEHDEHDENGATGPVKR ddPTM_A549_PD325901_60min_R1 1 KTKFASDDEHDEHDENGATGPVKR 24 3 P05455 P05455 SSB Lupus La protein 1 KT(0.5)KFAS(0.5)DDEHDEHDENGATGPVKR 44.05 0.01009 4531600.0 543.94 726.26 627.06 818.21 753.26 1430.6 1052.3 1097.1 1056.5 1296.1 1148.3 True False 599.1603883725357 787.4644790096911 669.6160624181008 868.7489734102655 700.3536162059273 1418.9496679139188 1092.3458523406546 1075.2174798416993 1012.0989790777169 1214.2640248061896 1007.066379673445 0.5949562019604127 0.7819390011461183 0.6649175028911529 0.8626531388049805 0.6954393775244752 1.4089931870965968 1.0846810839766716 1.067672897778946 1.0049972866792591 1.2057437814575156 1.0 9.975943064798724 KT(ph)KT(ph)LLK ddPTM_A549_MK2206_60min_R1 1 KTKTLLK 7 2 O00570;P41225 O00570 SOX1;SOX3 Transcription factor SOX-1;Transcription factor SOX-3 2 KT(1)KT(1)LLK 47.938 0.028076 70436000.0 7209.7 7572.5 7876.8 7165.5 10227.0 7459.6 7275.9 6594.4 11338.0 10964.0 12760.0 True False 8426.521099758445 7957.90790523738 8993.84868255393 8921.047821671518 8722.621847624983 8248.969920718277 8597.836849224921 7529.17639450302 8769.96110306554 8487.224785171293 9591.339841915491 0.8785551589917995 0.8296972098163193 0.9377051413869789 0.9301148711971706 0.9094268362284392 0.8600435451853274 0.8964166624199026 0.7849973537168885 0.9143624610963724 0.8848841689542621 1.0 13.227516648212976 -9.903788316473731 0.9634571490791081 0.9889332142247108 0.8823039703135285 0.04612167887221352 0.053164539854535925 0.2987373902324406 0.56626081338802 0.015839421998792198 0.008768668839674714 1.2479916612814981e-10 9.903788316473731 -0.10662924391118234 KT(ph)LSLVK ddPTM_A549_MK2206_60min_R1 1 KTLSLVK 7 1 F8VRW9;F8W0R1;F8VR88;F8VUZ2;F8VPA6;Q96RQ1 F8VRW9 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 1 KT(0.914)LS(0.086)LVK 53.756 0.027245 4958800.0 1391.3 1431.4 1401.3 1453.0 2415.9 1471.7 1391.8 1502.7 2370.0 2075.3 2041.6 True False 1626.1174259808195 1504.252145996274 1600.0254111901813 1808.9850652276489 2060.524310323379 1627.434317164605 1644.672044248991 1715.7123268257433 1833.1987841123073 1606.4882886415544 1534.6143747064798 1.0596260876885382 0.9802150760408372 1.042623761097124 1.1787880362932526 1.3426984291851742 1.0604842128341712 1.0717168243413342 1.11800876826395 1.1945664098597648 1.0468351627090824 1.0 10.583660458438253 -6.054734033649979 8.522910368594111 1.114397476256746 1.017764483994093 0.1891200339910769 0.08957028677556421 0.537101438705994 79.63676883577288 0.01448069654001844 0.03868796450291195 8.815886015337006e-07 6.054734033649979 -0.09663299226265298 KT(ph)PANEKVEIQK ddPTM_A549_PD325901_60min_R1 1 KTPANEKVEIQK 12 2 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KT(1)PANEKVEIQK 46.964 0.012586 9778400.0 1984.0 2055.2 1582.8 1958.3 1873.7 2031.7 1675.5 1989.3 1796.9 1983.1 2255.2 True False 2185.414219456394 2228.3989167250284 1690.2183261496034 2079.2597433780124 1742.0977759140874 2015.1545088079888 1739.2620693687795 1949.6218509243386 1721.3825418880726 1857.8867275620362 1977.8246968906674 1.1049585046096744 1.1266918247245512 0.8545844982150292 1.0512861663861366 0.8808150584087834 1.0188741762482831 0.8793813082135482 0.9857404723428389 0.8703413121467506 0.9393586451230054 1.0 10.949698844159334 -5.745168029529146 24.999349657931052 0.9415714312515591 1.115825306253776 0.5293745442881164 0.06311485374514218 139.90918273686597 214953.29636925794 0.008655388405456826 0.03331828169004334 1.798175062476292e-06 5.745168029529146 0.1742538750022169 KT(ph)PAQPQR ddPTM_A549_MK2206_60min_R1 2 KTPAQPQR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KT(1)PAQPQR;KT(1)PAQPQR 59.542 0.0075987 52832000.0 3929.8999999999996 3590.3 3830.2 3405.9 4766.700000000001 3507.5 3605.8 4037.6 4730.1 5367.4 5394.4 True False 4593.171043169715 3773.0309345888104 4373.379954285758 4240.345652896661 4065.5247444093084 3878.661321909936 4260.927185768797 4609.942164631411 3658.7399024175625 4154.900612178804 4054.82160213393 1.13276772540436 0.9305047927640462 1.0785628526749933 1.0457539366627364 1.002639608674706 0.956555356188473 1.0508297537742228 1.1369038189510825 0.9023183413277858 1.0246814829022826 1.0 11.985422727001461 -8.78598320270514 24.999917434914064 0.9538725582332495 1.0356133815505888 0.13501259833630896 0.0674621278456001 238.0651261107133 242488.04004824712 0.011468372630052612 0.01221170710688439 1.6368798301332895e-09 8.78598320270514 0.08174082331733934 KT(ph)PAQPQR ddPTM_A549_PD325901_60min_R1 2 KTPAQPQR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KT(1)PAQPQR;KT(1)PAQPQR 66.056 0.0053473 74970000.0 4791.299999999999 4498.3 4667.799999999999 5458.3 5326.299999999999 4683.6 4778.8 4543.299999999999 4807.700000000001 5099.2 5964.5 True False 5277.709248831361 4877.387527785225 4984.584977761637 5795.446794301281 4952.199062737473 4645.458314442634 4960.659849059699 4452.6803173500975 4605.64908822711 4777.235641765084 5230.904312080699 1.0089477715435486 0.932417654156083 0.9529107550772452 1.1079244521672438 0.9467194900316642 0.8880793907305883 0.948336951529227 0.8512257253619983 0.880468999899392 0.9132714645022518 1.0 12.352844663978457 -6.980011255692328 24.996326201627294 0.9309145814682968 0.9966608874810098 0.31961521487802924 0.05615672316418608 325.6733379929856 407258.89951110096 0.00947282142265712 0.01790058077696763 1.047101409773705e-07 6.980011255692328 0.06574630601271303 KT(ph)PELGIVPPPPIPR ddPTM_A549_MK2206_60min_R1 2 KTPELGIVPPPPIPR 15 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR 87.16 2.4826e-05 80224000.0 1621.3600000000001 1821.5500000000002 1754.69 1458.01 2030.1 1583.03 1632.44 1965.97 3014.5 2564.9 2324.5699999999997 True False 1895.0059295538445 1914.2591145308897 2003.5314270757883 1815.222515452556 1731.4749792572075 1750.545183869731 1929.033217354379 2244.652268030615 2331.7205631673196 1985.4873085995848 1747.3151141317787 1.084524430783884 1.095543155924719 1.1466342910170044 1.0388638550491334 0.9909345860134438 1.001848590281071 1.1039984727156062 1.2846293435434268 1.3344591048912922 1.1363075226337473 1.0 10.770924094748372 -8.008367683456665 23.932379851087912 1.1729233294509414 1.060536225438662 0.307854575955146 0.08933458556175898 356.29363234812274 1019038.1562522969 0.020909627328704262 0.028138978174774096 9.80917124919108e-09 8.008367683456665 -0.11238710401227925 KT(ph)PELGIVPPPPIPR ddPTM_A549_PD325901_60min_R1 2 KTPELGIVPPPPIPR 15 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR 105.79 3.0767e-06 130253000.0 2240.3 2051.91 2037.8 2195.3 2526.7 1937.85 1966.7200000000003 2244.2 2144.77 2335.1 2504.3 True False 2467.733606778307 2224.831656878771 2176.0973622868723 2330.8986951119596 2349.2333086417934 1922.0687920921187 2041.5646058304799 2199.4376704591577 2054.632775538584 2187.6613874893415 2196.28697606567 1.1235934254816256 1.01299679009354 0.9908073881060095 1.0612905874838938 1.0696385919703921 0.8751446477796934 0.929552753387286 1.001434554968373 0.9355028727708258 0.996072649580712 1.0 11.100850859905423 -7.226827814502815 24.995296544789888 0.9622590462462195 1.0466708480809286 0.500843762109734 0.04708791280352369 472.0952698169885 340931.4883189189 0.007126107330792728 0.012342388580221398 5.93160449333503e-08 7.226827814502815 0.08441180183470909 KT(ph)PEVVQSTRPIIEGSISQGTPIK ddPTM_A549_MK2206_60min_R1 2 KTPEVVQSTRPIIEGSISQGTPIK 24 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 KT(0.973)PEVVQS(0.009)T(0.009)RPIIEGS(0.009)ISQGTPIK;KT(0.965)PEVVQS(0.011)T(0.011)RPIIEGS(0.011)ISQGTPIK 50.144 0.003011 7941200.0 2614.3 3113.6000000000004 2621.6000000000004 2844.5 3637.8 3264.6 2682.2 2759.7 4617.5 3506.1 3889.8 True False 3055.529926501586 3272.068940739136 2993.382300703761 3541.402627694456 3102.6844389645216 3610.057805133903 3169.5210210408413 3150.8959262267936 3571.6436226323117 2714.069574907796 2923.8553069814175 1.045034588136343 1.1190940033613406 1.0237792183342078 1.2112099457310674 1.0611621004487144 1.2346909905267918 1.0840211598271765 1.0776511131393065 1.2215527950730467 0.9282503030937588 1.0 11.513656202975202 -4.688032196933883 1.0293283285622215 1.1130531217664583 0.9184085795921729 0.0 0.09334661186334832 15.906023342304806 5.76538069410395 0.013472567848952234 4.531914897966902 2.0510101191337e-05 4.688032196933883 -0.1946445421742854 KT(ph)PEVVQSTRPIIEGSISQGTPIK ddPTM_A549_PD325901_60min_R1 2 KTPEVVQSTRPIIEGSISQGTPIK 24 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 KT(1)PEVVQSTRPIIEGSISQGTPIK;KT(0.983)PEVVQS(0.008)T(0.008)RPIIEGS(0.002)ISQGTPIK 85.814 1.0446e-06 19477600.0 4649.4 4859.1 5702.4 5226.299999999999 6620.4 5761.3 5939.2 6333.9 5751.299999999999 5920.4 6320.3 True False 5121.403665292622 5268.593410012932 6089.399155316842 5549.1166812115125 6155.405943140114 5714.381882952927 6165.219506054942 6207.565395651573 5509.592861684494 5546.5849336182155 5542.943167682725 0.9239502391350818 0.950504677863315 1.098585890402078 1.0011137609284506 1.1104941466887588 1.030929185106885 1.1122646073660476 1.1199042111497417 0.9939832855958771 1.000657009430788 1.0 12.436436500274954 -5.588888441918113 8.919884586093296 1.0280793556261552 0.9305195289797124 0.35199587950993183 0.052886409812571165 0.25410421582193954 31.305202804579785 0.008094853599658829 0.031547695736684145 2.5769830267141556e-06 5.588888441918113 -0.0975598266464428 KT(ph)PPAPSPFDLPELK ddPTM_A549_MK2206_60min_R1 2 KTPPAPSPFDLPELK 15 1 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 KT(0.999)PPAPS(0.001)PFDLPELK;KT(0.998)PPAPS(0.002)PFDLPELK 94.057 1.4222e-05 9133700.0 2381.3 2678.4 2338.8 2120.49 3581.8 2758.7 2755.1 2990.1000000000004 3376.3 3443.3 3991.2 True False 2783.205222804662 2814.719119628631 2670.477008272031 2640.010145192412 3054.9219647817695 3050.623802923146 3255.6660074079587 3413.9558317972014 2611.5734408431995 2665.4561385242914 3000.0748884837885 0.9277119159552945 0.9382162860111686 0.8901367824260102 0.8799814149061626 1.0182819023980099 1.0168492175423343 1.085194912935438 1.1379568706441807 0.8705027500707043 0.88846320095409 1.0 11.550782798681809 -6.753921519510672 24.974173325009506 0.9746903698946393 0.909749449500238 0.20851174095707214 0.07620508858791407 318.871847181925 1059275.9051147993 0.012812240697403962 0.026268537705053045 1.7622944783582473e-07 6.753921519510672 -0.06494092039440136 KT(ph)PPAPSPFDLPELK ddPTM_A549_PD325901_60min_R1 2 KTPPAPSPFDLPELK 15 1 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 KT(1)PPAPSPFDLPELK;KT(0.999)PPAPS(0.001)PFDLPELK 109.03 2.1111e-06 14415100.0 7037.700000000001 6027.2 6587.8 6408.0 7729.799999999999 7912.8 6735.700000000001 7053.4 7376.9 7740.400000000001 7826.5 True False 7752.1621231190875 6535.13329646024 7034.887723659569 6803.8076063760955 7186.885514362343 7848.3607802804745 6992.030749416471 6912.714403714741 7066.874546860775 7251.669823015075 6863.890116271195 1.1294123291312894 0.9521034261560188 1.0249126376576185 0.9912465804554954 1.0470571924404022 1.1434275093762853 1.0186688060232072 1.0071132093632742 1.0295727972259339 1.0564956169424433 1.0 12.744810741640054 -9.980449559927637 0.6202971696390556 1.0008610503720616 1.0375577999322376 0.0 0.05511781486485471 1.821616128018797 1.395788182656429 0.03157805910661441 0.012044348089793279 1.046045173771352e-10 9.980449559927637 0.03669674956017599 KT(ph)PQGPPEIYSDTQFPSLQSTAK ddPTM_A549_MK2206_60min_R1 2 KTPQGPPEIYSDTQFPSLQSTAK 23 1 H0Y8K3;Q9UKY7-2;Q9UKY7;D6RFH2;D6R9V8;Q9UKY7-3;D6RDN0 H0Y8K3 CDV3 Protein CDV3 homolog 1 KT(1)PQGPPEIYSDTQFPSLQSTAK;KT(1)PQGPPEIYSDTQFPSLQSTAK 131.13 3.2080999999999996e-22 10691500.0 2434.5 2454.8 2899.2 2717.5 2995.5 2796.4 2420.1000000000004 2681.2 4279.2 3419.8999999999996 3406.4 True False 2845.384082189541 2579.7388347014494 3310.3501549436783 3383.287621993212 2554.8659181148537 3092.313191899913 2859.800843718196 3061.268310830626 3309.9680324782207 2647.342214776295 2560.4968681427067 1.1112624731517369 1.0075149346199748 1.2928546002654902 1.3213402695732754 0.9978008369789816 1.20770043907258 1.116892927813887 1.195575885648773 1.2927053626428193 1.0339173805342643 1.0 11.322208079125677 -11.062463817200076 1.3928038312328863 1.0006319598434912 1.184676982062537 0.23781720409484386 0.1043321436636587 0.44764893305018166 1.558113469588952 0.07596826873283742 0.01709386314148309 8.660364732961906e-12 11.062463817200076 0.18404502221904573 KT(ph)PQGPPEIYSDTQFPSLQSTAK ddPTM_A549_PD325901_60min_R1 2 KTPQGPPEIYSDTQFPSLQSTAK 23 1 H0Y8K3;Q9UKY7-2;Q9UKY7;D6RFH2;D6R9V8;Q9UKY7-3;D6RDN0 H0Y8K3 CDV3 Protein CDV3 homolog 1 KT(1)PQGPPEIYSDTQFPSLQSTAK;KT(1)PQGPPEIYSDTQFPSLQSTAK 200.43 5.8298999999999986e-61 10031600.0 3689.8999999999996 3308.2 4091.8 4134.1 4137.0 4312.200000000001 4090.7 4332.0 4593.7 4233.200000000001 4962.5 True False 4064.4959316391864 3586.993624128908 4369.494153992261 4389.4539677776875 3846.4313918752123 4277.082872905355 4246.3738270169315 4245.594861611741 4400.642764022061 3965.9150295575687 4352.143959879362 0.9339065915806358 0.8241900215608531 1.0039865855249375 1.0085727880884159 0.8838015073338319 0.9827530780999054 0.9756970050077658 0.9755180207158004 1.0111436580659532 0.9112554791656066 1.0 12.087510563393957 -4.265486820920206 0.2724646328690546 1.0091051676114762 0.7108475317037007 0.06005837832690486 0.05592532169718285 11.057899753933029 0.3929859071198976 0.020151896153167495 1.2197633403867911 5.4264171805905895e-05 4.265486820920206 -0.29825763590777543 KT(ph)PTLASPVPTTPFLR ddPTM_A549_MK2206_60min_R1 2 KTPTLASPVPTTPFLR 16 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 KT(0.816)PT(0.184)LAS(0.001)PVPTTPFLR;KT(0.905)PT(0.058)LAS(0.032)PVPT(0.003)T(0.001)PFLR 99.40700000000001 1.2921999999999999e-06 7877300.0 3631.3 3391.4 4246.1 3792.5 4736.4 4164.3 4095.6 4073.8 6110.4 5164.1 5634.299999999999 True False 4244.1746632388085 3564.0077741593987 4848.260828127189 4721.662670251797 4039.681834271138 4604.963461961382 4839.7175056949045 4651.2736254892625 4726.40415630373 3997.5262233767858 4235.14781123076 1.0021314136862263 0.8415309058891325 1.144767796597459 1.1148755322614472 0.9538467166502935 1.0873206006529321 1.1427505535605975 1.0982553225545093 1.1159950884760754 0.9438929646743733 1.0 12.048196606712665 -5.7623964059708515 24.9999927625573 1.0685068310376375 0.92183116278906 0.3522708298744506 0.07582098641895678 17.66389883183208 461495.96580814413 0.009671780482515095 0.032823410422503016 1.728238175025741e-06 5.7623964059708515 -0.14667566824857758 KT(ph)PTLASPVPTTPFLR ddPTM_A549_PD325901_60min_R1 1 KTPTLASPVPTTPFLR 16 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 KT(0.999)PT(0.001)LASPVPTTPFLR 80.994 0.00016276 7616700.0 3268.5 3073.4 3055.3 3463.1 3394.1 3140.0 3368.8 3378.9 2755.9 3474.2 3531.8 True False 3600.3157138574743 3332.406204098239 3262.6510310114254 3677.007821729252 3155.710125009344 3114.4288810636826 3497.001527478095 3311.505188804228 2640.079106900406 3254.8384190893175 3097.4109899248238 1.1623629300627154 1.0758682702869595 1.05334779324542 1.1871229984298906 1.0188218919846783 1.0054942308896735 1.129007916241354 1.0691203716832556 0.852350274305859 1.050825489312387 1.0 11.596847109000798 -8.66476422189471 7.275539280672159 0.9304474050097117 1.086720206240957 0.3302707949192947 0.07107322890775752 0.1371323759503822 9.022113440820593 0.012133238916608072 0.013749007362618493 2.1638929805532694e-09 8.66476422189471 0.15627280123124543 KT(ph)PVASDQR ddPTM_A549_MK2206_60min_R1 2 KTPVASDQR 9 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KT(0.617)PVAS(0.383)DQR;KT(0.545)PVAS(0.455)DQR 66.023 0.0034308999999999997 33754000.0 4905.5 5110.9 5439.3 5264.4 9021.1 6328.1 5865.2 6773.0 9348.7 7561.2 7438.3 True False 5733.428472039756 5371.022979581081 6210.674530141121 6554.178236327897 7694.108140178911 6997.735341747183 6930.830919621484 7733.093491442576 7231.234376806211 5853.119668518534 5591.164823363642 1.0254443668127329 0.9606268370299761 1.110801546072967 1.1722384231886955 1.376118999037152 1.2515702117215262 1.2396041144521115 1.3830916697587803 1.2933323565403145 1.0468515691149487 1.0 12.448933159828579 -5.984093070655001 3.005803329048931 1.1924557101757916 0.9933506553009812 0.35067887673266074 0.11573155761432595 0.29581962042365334 5.424348868783469 0.02059582717328904 0.07198400578266127 1.0373060940822298e-06 5.984093070655001 -0.19910505487481034 KT(ph)PVASDQR ddPTM_A549_PD325901_60min_R1 2 KTPVASDQR 9 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KT(0.595)PVAS(0.405)DQR;KT(0.733)PVAS(0.267)DQR 46.481 0.022489 39858000.0 13376.5 12788.5 14102.5 14199.0 16339.1 13500.8 13182.0 14260.599999999999 14806.300000000001 16561.7 16077.9 True False 14734.472432741164 13866.231776244658 15059.580455221621 15076.039981731292 15191.497982834959 13390.85396097598 13683.648223467175 13976.161145775715 14184.042701295226 15515.991435562595 14100.420226205424 1.044966901437261 0.9833913850648557 1.0680235208333446 1.0691908283494056 1.077379095028798 0.9496776511730675 0.9704425828413479 0.9911875618998379 1.005930495243992 1.1003921292165713 1.0 13.783450538572707 -7.250203857284315 24.964527594033786 0.9958813004434567 1.0471922724011087 0.2139485271837538 0.042371763439060434 563.9617157158197 1253083.0096519128 0.004392130552551734 0.007561988999998135 5.620774248207239e-08 7.250203857284315 0.051310971957651996 KT(ph)PVKEPNSENVDISSGGGVTGWK ddPTM_A549_PD325901_60min_R1 1 KTPVKEPNSENVDISSGGGVTGWK 24 2 P61026 P61026 RAB10 Ras-related protein Rab-10 1 KT(0.953)PVKEPNS(0.047)ENVDISSGGGVTGWK 163.49 2.4442999999999997e-34 14644000.0 3304.8 3035.5 2526.6 3120.3 2894.1 2828.6 2844.6 2723.3 3844.6 3492.5 4223.9 True False 3640.300863134825 3291.312238088176 2698.070269680054 3313.0338442845386 2690.8284001029856 2805.5648194193423 2952.8528096248483 2668.9816451124793 3683.0248319566385 3271.982953966221 3704.3870775081973 0.982699914174066 0.8884903681021689 0.728344585278854 0.8943541198489151 0.7263896412015899 0.7573627595382232 0.797123180661542 0.7204921055139312 0.9942332577280427 0.8832724241569165 1.0 11.855019140718285 -8.780143306415395 24.791885939782734 0.9972768552922949 0.8092611651124839 0.3469615058971661 0.0856784050174634 116.6077922040795 154561.93346677924 0.013416672895603667 0.014295631996392893 1.6590393752306054e-09 8.780143306415395 -0.188015690179811 KT(ph)SATVGPK ddPTM_A549_PD325901_60min_R1 4 KTSATVGPK 9 1 P16104 P16104 H2AFX Histone H2AX 1 KT(0.489)S(0.489)AT(0.022)VGPK;KT(0.528)S(0.368)AT(0.104)VGPK;KT(0.887)S(0.094)AT(0.018)VGPK;KT(0.489)S(0.489)AT(0.021)VGPK 82.417 0.0046614 96754500.0 12377.900000000001 10730.1 12250.0 12065.3 14197.699999999999 12820.2 12706.9 13886.2 13183.4 13318.0 14808.2 True False 13634.495295871635 11634.363184289232 13081.358665234166 12810.546178715582 13200.502531406013 12715.796541723765 13190.46803298249 13609.228847486835 12629.347544508446 12477.099207135907 12986.885276913976 1.0498664618304496 0.8958547747373234 1.0072745224359632 0.9864217559146486 1.0164486903470051 0.9791259621217946 1.0156760263702653 1.0479209261730495 0.9724693238769805 0.960746086616759 1.0 13.664767841561575 KT(ph)SDANETEDHLESLICK ddPTM_A549_MK2206_60min_R1 1 KTSDANETEDHLESLICK 18 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.495)S(0.495)DANET(0.009)EDHLESLICK 121.26 1.0424e-10 7308000.0 883.4 864.27 1052.4 731.01 980.51 913.24 744.3 731.67 1373.2 1132.1 1403.1 True False 1032.4963229436191 908.2576514043591 1201.6461448202006 910.1074828162856 836.2782778737427 1009.87845064035 879.5296756247478 835.3864631453991 1062.1723925497972 876.3578237224026 1054.671546410002 0.9789742848928985 0.8611758366820254 1.1393558012544147 0.862929777440381 0.7929276946176764 0.9575288667622415 0.8339370476226272 0.7920821093438732 1.0071120209560287 0.830929616623714 1.0 10.04257805881348 -8.88046610325863 19.924392478921394 1.003379566560677 0.9032188772109714 0.0 0.10741721294341226 2.51808624083055 420.4306101821654 0.016039771256547222 0.017075351260524823 1.3168426884555768e-09 8.88046610325863 -0.10016068934970568 KT(ph)SDANETEDHLESLICK ddPTM_A549_PD325901_60min_R1 2 KTSDANETEDHLESLICK 18 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.498)S(0.498)DANET(0.003)EDHLESLICK;KT(0.499)S(0.499)DANET(0.003)EDHLESLICK 128.01 7.748899999999999e-13 10038100.0 889.96 1104.97 1284.33 1250.97 1138.76 1512.8000000000002 1138.15 2114.07 2005.22 3999.9 4708.0 True False 980.308084046075 1198.0896997925527 1371.4923571036902 1328.2395757409965 1058.7774261087302 1500.4802583672422 1181.4629210695782 2071.903215394169 1920.947576740387 3747.3456313727934 4128.9458464709405 0.23742333285479056 0.29016842175747454 0.33216525672670694 0.32168975451113235 0.25642802436212137 0.36340516784682964 0.2861415395116864 0.5017995615430629 0.4652392276789592 0.9075792637425106 1.0 12.01155778151472 -10.539719838704771 0.3461287752975307 1.2207520339212414 0.2613587456712091 0.9571667037489787 0.05174739891817044 0.284336186036435 0.04734348821936493 0.1036767062089179 0.01751369007853726 2.885892578290258e-11 10.539719838704771 -0.9593932882500323 KT(ph)SEEEKNGSEELVEK ddPTM_A549_MK2206_60min_R1 1 KTSEEEKNGSEELVEK 16 2 F8SNU6;E9PC05;Q9H0C8 F8SNU6 ILKAP2;ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 KT(0.5)S(0.5)EEEKNGSEELVEK 96.131 1.786e-06 14451000.0 3838.0 3810.7 3433.1 3680.7 4572.9 3795.8 3418.0 3813.2 5912.1 4414.3 4906.3 True False 4485.760569908999 4004.6483531842964 3919.965203137812 4582.4716652329 3900.2324676839976 4197.469036551882 4039.006356691376 4353.7327774352325 4573.0187896837015 3417.106564135505 3687.9303030086203 1.2163355056492005 1.0858796192317672 1.0629173767031055 1.242559183261818 1.0575667507876114 1.1381638728713444 1.0951959567664138 1.1805355361199341 1.2399959906924012 0.9265648435242453 1.0 11.848595675664162 -11.049992836989025 1.3739631955052143 1.0005607379141486 1.1534015444147212 0.4910695406828538 0.06901409002869842 0.34182001980104093 1.1575992737118923 0.04761176488081148 0.010783546806134876 8.912656380508865e-12 11.049992836989025 0.15284080650057263 KT(ph)SEEEKNGSEELVEK ddPTM_A549_PD325901_60min_R1 2 KTSEEEKNGSEELVEK 16 2 F8SNU6;E9PC05;Q9H0C8 F8SNU6 ILKAP2;ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 KT(0.584)S(0.416)EEEKNGSEELVEK;KT(0.5)S(0.5)EEEKNGSEELVEK 85.805 1.9432e-05 31966000.0 9468.4 10635.6 9847.599999999999 10249.8 11434.0 11544.0 9936.1 11297.2 12213.6 13068.2 13885.199999999999 True False 10429.62499773233 11531.899337641451 10515.917354429388 10882.906867015243 10630.915285158611 11449.989491401 10314.223722742548 11071.86848351805 11700.304865938098 12243.071621767038 12177.408425534899 0.8564732850597645 0.9469912591138953 0.8635595511749842 0.8936964653492934 0.8730030983330218 0.9402648815975846 0.8469966155618609 0.90921385705528 0.9608205996773206 1.005392214331454 1.0 13.571919513659987 -8.877457583798034 1.8120286821738392 0.9857277664686667 0.8905258268784556 0.6673245910032706 0.031116185676398542 0.13654633586710715 0.884903458586322 0.005638395929641006 0.005829818350755124 1.325996617434602e-09 8.877457583798034 -0.09520193959021106 KT(ph)SEEEKNGSEELVEKK ddPTM_A549_PD325901_60min_R1 1 KTSEEEKNGSEELVEKK 17 3 F8SNU6;E9PC05;Q9H0C8 F8SNU6 ILKAP2;ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 KT(0.5)S(0.5)EEEKNGSEELVEKK 41.412 0.03986 5082500.0 1350.2 1461.6 1830.1 1775.6 1925.3 1830.0 1777.5 1560.7 2206.7 2064.6 2166.1 True False 1487.2713100352942 1584.7741614856468 1954.3015912853098 1885.2747793198164 1790.0735699244249 1815.097086734566 1845.1437351853222 1529.5706141545347 2113.960073005962 1934.2408036531592 1899.683432039231 0.7829048171667057 0.8342306590443113 1.0287511899745572 0.9924152348352338 0.9423009853819988 0.9554734521141424 0.9712901129029888 0.8051713187352507 1.1127959729251908 1.0181911212316213 1.0 10.891543308966352 -3.255436523891871 0.3202824013720333 1.0365784846564037 5.987756236778666e-17 0.28507214185473906 0.08240881436272564 18.029076159849858 0.46651688090331556 0.02814534960859393 9.561906873513239 0.0005553457800498697 3.255436523891871 -1.0365784846564037 KT(ph)SLDVSNSAEPGFLAPGAR ddPTM_A549_PD325901_60min_R1 1 KTSLDVSNSAEPGFLAPGAR 20 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;H0Y6F6;Q8NEY1-5 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 KT(0.497)S(0.497)LDVS(0.006)NSAEPGFLAPGAR 86.604 6.8138e-06 4869800.0 2544.8 2700.5 2256.6 2652.2 2681.2 2721.4 2694.4 2718.5 2880.2 2857.0 3318.6 True False 2803.1462226172566 2928.080612405575 2409.7464460381575 2816.0203704167716 2492.881761637856 2699.237820677295 2796.9368664322533 2664.277384878006 2759.1552101653015 2676.608532421328 2910.4332383386695 0.9631370978354225 1.0060634869868992 0.8279682949929772 0.967560545049372 0.8565328792976677 0.9274350585062969 0.9610036160900903 0.9154229513949704 0.9480221617247195 0.9196598283591576 1.0 11.507018209025993 -9.914748887974708 0.6028410548471599 0.9995855536894781 0.9257899723287923 0.0 0.053303269722310066 0.815474475928952 0.6001740405074953 0.02777324338735948 0.011030094705992546 1.2168894110081675e-10 9.914748887974708 -0.07379558136068576 KT(ph)SPASLDFPESQK ddPTM_A549_MK2206_60min_R1 1 KTSPASLDFPESQK 14 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.626)S(0.374)PASLDFPESQK 97.86 0.00012583 5750700.0 2297.0 2849.5 2794.0 2854.8 3907.1 3794.9 2973.5 2929.9 4826.8 5765.1 5172.3 True False 2684.6774437417857 2994.527378801441 3190.2312130631344 3554.226128156841 3332.3707657040723 4196.473799149253 3513.7464603925673 3345.222297442434 3733.537506815732 4462.75990596416 3887.8751617820953 0.6905256295603903 0.7702221018405415 0.8205590664080942 0.9141821638449114 0.857118767202547 1.0793746261198636 0.9037703923553868 0.8604243084567241 0.9603028264684251 1.1478660502871068 1.0 11.924766179951105 -3.9865009531959235 0.3708326827421581 0.9810895279937739 3.4186039216682916e-14 0.6275392849033068 0.07739682714384875 5.2334245470598475 0.23764674538102246 0.014591674867336856 2.8131402013524474 0.00010315708153302121 3.9865009531959235 -0.9810895279937397 KT(ph)SPGPTHR ddPTM_A549_MK2206_60min_R1 1 KTSPGPTHR 9 1 Q14678;Q14678-2;Q5W0W3 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 KT(0.5)S(0.5)PGPTHR 47.288000000000004 0.013233000000000002 4963400.0 392.79 333.36 213.33 277.41 406.9 413.56 244.86 292.15 380.51 449.38 389.61 True False 459.08334920650196 350.32660010431624 243.58340181916896 345.3754624534081 347.0455490171704 457.32264470109 289.3478924808223 333.5631571718514 294.3250925496094 347.86474589203556 292.8590843110265 1.5675912880986118 1.1962292408599395 0.8317426874164332 1.1793230292511854 1.1850257260539543 1.5615791662293033 0.9880106439639236 1.1389885956810402 1.005005848604737 1.187822965131555 1.0 8.194062836440688 KT(ph)SPGPTHR ddPTM_A549_PD325901_60min_R1 2 KTSPGPTHR 9 1 Q14678;Q14678-2;Q5W0W3 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 KT(0.496)S(0.496)PGPT(0.008)HR;KT(0.5)S(0.5)PGPTHR 78.908 0.00068403 10398400.0 678.72 868.22 585.6400000000001 706.36 505.95000000000005 716.8 519.5899999999999 608.66 802.77 814.5799999999999 636.14 True False 747.623154752744 941.3879464183551 625.3850521394072 749.9902529400459 470.41381743274417 710.9626184542827 539.3632817805574 596.5197988154669 769.0323686078738 763.1472797829074 557.8988128237096 1.3400694490973677 1.687381160848292 1.1209650168892231 1.3443123299440238 0.8431884180785848 1.2743576471436941 0.966776177656056 1.0692257898816522 1.3784441746981817 1.3678955076465709 1.0 9.123859671192674 -5.775871211242144 24.996506953132844 1.152772169350312 1.5137253040723184 0.3664760045016249 0.18358971840917862 160.9827907424546 278830.00343746727 0.025526320228411066 0.07987444888900797 1.675439649090072e-06 5.775871211242144 0.3609531347220065 KT(ph)SSDDESEEDEDDLLQR ddPTM_A549_PD325901_60min_R1 1 KTSSDDESEEDEDDLLQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 KT(0.333)S(0.333)S(0.333)DDES(0.002)EEDEDDLLQR 106.63 2.8385e-09 10703000.0 4078.7 4622.6 3489.0 4015.2 4494.5 4508.1 4075.0 4564.6 3652.9 4322.6 4419.0 True False 4492.766621419756 5012.16272501611 3725.784521061389 4263.209784819175 4178.821825183256 4471.38752825579 4230.076354925563 4473.555472140572 3499.381316301931 4049.670298300469 3875.491014349 1.1592767483617672 1.2932974702969466 0.9613709610644631 1.1000437800099774 1.0782690011952483 1.1537602620417604 1.0914943007901994 1.1543196605481059 0.9029517300763894 1.0449437976521092 1.0 11.920163392233281 -8.757548597733829 24.997854199117132 0.9541716473041494 1.1217910867534904 0.35448742060656535 0.08250769155839385 62.243464623162176 399907.2050813612 0.01369028950274044 0.015241246145190247 1.7476376900890082e-09 8.757548597733829 0.167619439449341 KT(ph)TPKEPTEK ddPTM_A549_MK2206_60min_R1 1 KTTPKEPTEK 10 2 P26358;P26358-2 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 KT(0.5)T(0.5)PKEPTEK 47.062 0.011715 6817700.0 2305.5 2767.6 2443.4 2088.1 3326.5 2352.7 2721.8 2262.8 2895.6 3182.4 3706.5 True False 2694.6120359367364 2908.4590186246273 2789.910861130444 2599.6845937383696 2837.1762565879026 2601.6611524041355 3216.315828450141 2583.5588295343655 2239.751223323036 2463.493629727211 2786.0737558040582 0.9671718239056719 1.0439275028400132 1.001377244704449 0.9330997028785059 1.0183421205836298 0.933809145211699 1.154425945023812 0.9273117138956549 0.8039095227314418 0.8842169467319968 1.0 11.444017735610686 -8.500784396430566 24.959768312753567 0.9052021822982405 1.0060269241042148 0.3341476764829201 0.07094346154228368 846.9187594711173 956757.4065372595 0.014165711089871358 0.017052139869445853 3.1565713002801003e-09 8.500784396430566 0.10082474180597434 KT(ph)TSTEEPR ddPTM_A549_PD325901_60min_R1 1 KTTSTEEPR 9 1 Q5THJ4-2;Q5THJ4;H3BLS7;A0A2R8YD87 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 KT(0.326)T(0.326)S(0.242)T(0.106)EEPR 45.915 0.025986000000000002 4473000.0 1806.5 1325.0 1377.9 1376.6 1357.7 1653.4 1090.3 1295.3 1301.9 1493.9 1733.0 True False 1989.8945501249875 1436.6624000879046 1471.4125799858102 1461.6294555145635 1262.3398358107263 1639.935258583023 1131.7919631350524 1269.4642253568074 1247.185670479204 1399.5748990494315 1519.8519863921283 1.30926864453996 0.9452646790285798 0.9681288659421994 0.9616919730349694 0.8305676125787141 1.079009846528511 0.7446724899980129 0.8352551674260734 0.8205967960339426 0.920862631085403 1.0 10.569715115636445 KT(ph)VSFSAIEVVPAPEPPPATPPQAK ddPTM_A549_MK2206_60min_R1 1 KTVSFSAIEVVPAPEPPPATPPQAK 25 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 KT(0.447)VS(0.447)FS(0.106)AIEVVPAPEPPPATPPQAK 73.126 8.5925e-06 3314300.0 604.16 855.86 739.13 795.98 1201.4 819.78 861.43 1144.1 1399.7 1184.1 1254.3 True False 706.1274377061546 899.4196183263741 843.9497482145143 990.9951357329006 1024.6756514849562 906.5285754740776 1017.9406804694703 1306.279678659302 1082.670184861602 916.6109876068339 942.8226930810821 0.7489504048726033 0.9539647538469088 0.8951309237758612 1.0510938514795334 1.0868169158470127 0.9615048323790365 1.0796735037665541 1.3854987668895267 1.1483285169171178 0.9721986905209186 1.0 9.880842673438677 -5.3091769204638535 0.6837760782340179 1.0932197391344531 0.5892192354811091 0.45857331650970845 0.11273633123535197 2.065818737061025 0.6875746929466521 0.01963030083844482 0.7943040337791589 4.907079335684619e-06 5.3091769204638535 -0.504000503653344 KT(ph)VSFSAIEVVPAPEPPPATPPQAK ddPTM_A549_PD325901_60min_R1 1 KTVSFSAIEVVPAPEPPPATPPQAK 25 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 KT(0.548)VS(0.427)FS(0.024)AIEVVPAPEPPPATPPQAK 88.29299999999999 1.8234999999999998e-08 7213900.0 1642.9 1274.0 1122.2 1638.2 2001.7 2339.6 1679.2 1584.1 1591.9 1374.6 1462.7 True False 1809.6859985609422 1381.3644511033885 1198.3592403367995 1739.3878933778578 1861.1074974901164 2320.547073291907 1743.1028748934987 1552.503882797591 1524.9979789813694 1287.8075214092967 1282.797172819253 1.4107343209867893 1.0768377732447838 0.9341767083124443 1.3559336816709204 1.4508197686465807 1.8089742653485514 1.3588296823749728 1.210248912059568 1.1888067820026624 1.0039057995263836 1.0 10.325077363975131 -9.307696387443189 0.9931042532212114 1.0442230222248547 1.3276912678273698 0.25601523415272853 0.21121210442010094 0.5348941469941468 1.1114597423248718 0.061787367307106274 0.04933410676906266 4.923836377100734e-10 9.307696387443189 0.28346824560251505 KT(ph)YDLLFK ddPTM_A549_MK2206_60min_R1 1 KTYDLLFK 8 1 P61026 P61026 RAB10 Ras-related protein Rab-10 1 KT(0.549)Y(0.451)DLLFK 52.58 0.016566 2039900.0 1138.3 1108.7 1112.6 987.99 1410.0 1423.6 1224.7 1286.1 1922.8 1833.1 1430.1 True False 1330.4172112369488 1165.128094359417 1270.383410040817 1230.0475943525564 1202.5908678157052 1574.2444070908007 1447.212137226426 1468.4086135160637 1487.288870080652 1419.001436856759 1074.966701247911 1.237635742290891 1.083873661395129 1.181788615932056 1.1442657646275132 1.1187238324867528 1.4644587644094338 1.3462855505629907 1.366003813710148 1.3835673871144873 1.3200422256889108 1.0 10.070076255464214 -4.9115212878057335 14.676629749360481 1.2115675331151308 1.7551017056269944 0.0 0.14219289249173714 10623438.075266413 28653028.164925262 0.023900448573874102 182771319.68225548 1.2259668080095159e-05 4.9115212878057335 0.5435341725118636 KT(ph)YDLLFK ddPTM_A549_PD325901_60min_R1 2 KTYDLLFK 8 1 P61026 P61026 RAB10 Ras-related protein Rab-10 1 KT(0.566)Y(0.434)DLLFK;KT(0.557)Y(0.443)DLLFK 80.067 0.0024562 9293300.0 3061.4 3179.1 3739.1000000000004 3445.5 3762.0 3269.3 4174.9 3772.5 3555.0 3644.6 3750.4 True False 3372.191074316436 3447.0139140524198 3992.857811034867 3658.320709701754 3497.7700981954426 3242.67590473296 4333.778104092941 3697.2545280310032 3405.595712845512 3414.479334008673 3289.1245757443935 1.0252548958420775 1.048003453402884 1.2139576106299363 1.1122475374389869 1.0634349711135003 0.9858781052703298 1.3176083800693752 1.1240846744742838 1.0354109838101098 1.0381118912882494 1.0 11.68348793601116 -8.862822226554012 4.2394341589076 1.0152248957347896 1.113636175260594 0.16445061083550572 0.0871724923413439 0.2568676970187928 8.110532539718525 0.01540261632606824 0.016295737893703376 1.3714430356991808e-09 8.862822226554012 0.09841127952580453 KTAAELLQSQGSQAGGS(ph)QTLKR ddPTM_A549_MK2206_60min_R1 2 KTAAELLQSQGSQAGGSQTLKR 22 2 B1AMS2;Q14141-2;Q14141-4;Q14141 B1AMS2 SEPT6 Septin-6 1 KTAAELLQSQGS(0.027)QAGGS(0.486)QT(0.486)LKR;KTAAELLQS(0.002)QGS(0.01)QAGGS(0.494)QT(0.494)LKR 92.92399999999999 2.7302e-07 20275900.0 3352.2 3961.5 4311.1 3946.7000000000003 4846.9 4507.200000000001 3448.8 3810.5 5599.5 5318.0 5933.5 True False 3917.9694065786707 4163.123429065422 4922.478805524864 4913.641677174093 4133.927430649603 4984.148912362782 4075.402318009716 4350.650044166832 4331.222190564079 4116.660106488595 4460.048193730846 0.8784589843862821 0.9334256600449321 1.103682873302585 1.1017014758003802 0.9268795427951548 1.117510102103521 0.9137574620243347 0.9754715319628638 0.9711155580453485 0.923007987284773 1.0 12.122843584153147 KTAAELLQSQGSQAGGS(ph)QTLKR ddPTM_A549_PD325901_60min_R1 1 KTAAELLQSQGSQAGGSQTLKR 22 2 B1AMS2;Q14141-2;Q14141-4;Q14141 B1AMS2 SEPT6 Septin-6 1 KTAAELLQS(0.013)QGS(0.006)QAGGS(0.573)QT(0.408)LKR 107.75 8.2416e-11 14985000.0 1822.4 1858.3 2735.5 2328.1 2746.8 2761.6 2372.7 2694.2 2507.8 2794.3 3000.8 True False 2007.408706420027 2014.905462704417 2921.1474798978024 2471.9014495012775 2553.8742439455723 2739.1104452055606 2462.994396891257 2640.4620674409884 2402.4058871094167 2617.8674211217804 2631.7206236384873 0.7627742429759443 0.7656228570032285 1.1099762845872172 0.9392719832410434 0.9704199682163495 1.0408059353270567 0.9358874854603839 1.0033215698216538 0.9128650911995243 0.9947360664379511 1.0 11.361790629250383 -5.7328872606526105 24.707663869958406 0.9720054628668946 0.764198092584148 0.7157235668529274 0.0538775378027728 77.1377363993064 66750.08144758687 0.007363756323144752 0.028508156082756947 1.8497487365223678e-06 5.7328872606526105 -0.20780737028274665 KTAAELLQSQGSQAGGSQT(ph)LKR ddPTM_A549_PD325901_60min_R1 1 KTAAELLQSQGSQAGGSQTLKR 22 2 B1AMS2;Q14141-2;Q14141-4;Q14141 B1AMS2 SEPT6 Septin-6 1 KTAAELLQSQGS(0.008)QAGGS(0.232)QT(0.76)LKR 88.986 7.064699999999999e-07 15430000.0 2801.0 2722.9 3408.5 2620.5 3324.4 3176.5 2740.1 3227.2 3194.0 3431.0 3711.9 True False 3085.3554580127816 2952.368339018382 3639.8213069755675 2782.3623334126955 3090.9056125573984 3150.6316371652197 2844.3760049402526 3162.830964310576 3059.7672874341956 3214.3660744618783 3255.3598316727853 0.9477770868811618 0.9069253451779832 1.1181010687550397 0.8547019307487623 0.9494820150094188 0.9678289958951326 0.8737516440628481 0.9715764547863629 0.9399167667009999 0.9874073038525384 1.0 11.668601305373402 -10.73333210226185 0.9024454121840139 1.001171651625759 0.9476611769204822 0.0687797795175914 0.06465857460503738 1.278935113622812 1.7839771076965631 0.04609289181297016 0.010870164265831685 1.847855035431317e-11 10.73333210226185 -0.0535104747052767 KTAEISSTALRS(ph)SPIMR ddPTM_A549_MK2206_60min_R1 3 KTAEISSTALRSSPIMR 17 2 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 KTAEIS(0.001)S(0.002)T(0.006)ALRS(0.496)S(0.496)PIMR;KTAEIS(0.001)S(0.006)T(0.001)ALRS(0.561)S(0.43)PIMR;KTAEIS(0.007)S(0.019)T(0.005)ALRS(0.485)S(0.485)PIMR 61.181000000000004 0.0013344000000000001 29328400.0 4641.1 5721.6 6149.3 5185.8 7155.3 4744.9 4668.7 4981.9 7797.599999999999 8801.8 9007.7 True False 5424.404215999128 6012.8050010704765 7021.363206331108 6456.321232799408 6102.764848568594 5247.002168590289 5516.942357368346 5688.099581428874 6031.4560502084905 6813.4672668844105 6770.839490127134 0.8011420480294498 0.8880442388034775 1.037000392132951 0.953548115003119 0.9013306041986833 0.7749411540830615 0.8148092072501273 0.8400877896637409 0.8907988527867524 1.006295788996244 1.0 12.725119003714743 -10.324168207707226 0.9006669285554539 0.9943260859838516 0.8810782503791871 0.3140508419555653 0.07037367366174212 0.5976551072990541 0.934134839981271 0.03891027482654401 0.014594037901092802 4.740583409494303e-11 10.324168207707226 -0.11324783560466456 KTAEISSTALRS(ph)SPIMR ddPTM_A549_PD325901_60min_R1 2 KTAEISSTALRSSPIMR 17 2 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 KTAEIS(0.004)S(0.017)T(0.02)ALRS(0.48)S(0.48)PIMR;KTAEISS(0.001)T(0.001)ALRS(0.499)S(0.499)PIMR 62.966 0.0011705 78108000.0 3614.0 3112.0 3291.2 3838.9 4042.1000000000004 4913.9 4106.9 4893.9 4802.9 4603.7 4366.5 True False 3980.8906195138156 3374.2591615649517 3514.560623593365 4076.0201342255273 3758.196840487986 4873.88282759835 4263.1903268819115 4796.28732530972 4601.050815534655 4313.021596327641 3829.4481815240756 1.0395468043464862 0.8811345660308781 0.9177720802046762 1.0643883768661726 0.9813938359631407 1.2727376364859444 1.1132649208965695 1.2524747947890635 1.2014918592535937 1.1262775710444812 1.0 11.902920801320196 -6.732517780547253 1.8132052246100234 1.1214804230216493 0.9466098854009054 0.4580748888023001 0.09116375698954736 0.31347049393484444 2.088749837586103 0.016210133210503585 0.03944372751340254 1.8513230972218103e-07 6.732517780547253 -0.1748705376207439 KTAEISSTALRSS(ph)PIMR ddPTM_A549_PD325901_60min_R1 1 KTAEISSTALRSSPIMR 17 2 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 KTAEIS(0.002)S(0.006)T(0.006)ALRS(0.207)S(0.779)PIMR 40.369 0.050378 8228800.0 2660.8 3236.1 2720.2 3114.5 3198.7 3671.2 3196.1 3292.7 3557.5 3659.3 4215.6 True False 2930.9224572225694 3508.8175040939395 2904.809129891429 3306.875591457293 2974.0343469159366 3641.30296438248 3317.7293344730265 3227.0245154268223 3407.9906465394943 3428.2511734999534 3697.107924890162 0.7927608597765359 0.9490708887537233 0.7856976828659198 0.8944492989220859 0.8044218365641281 0.9849057799660149 0.8973850376768737 0.8728510449211987 0.9217990699150993 0.9272791714896459 1.0 11.852181443532439 -14.9999993102808 0.07700515662703691 1.4422749312195693 0.7418450185509613 0.2760043112862688 0.06009722190673405 102.25841672442449 0.5843801761878289 7.683334146312191 0.8565785388898183 1.0000015881384113e-15 14.9999993102808 -0.700429912668608 KTAESVTSLPSQNNGT(ph)TSPDPFESQPLTVASSKPSSAR ddPTM_A549_MK2206_60min_R1 1 KTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSAR 38 2 I3L356;I3L2H1;I3L2B2;O95208-5;O95208-3;O95208-2;O95208 I3L356 EPN2 Epsin-2 1 KTAESVT(0.001)SLPS(0.119)QNNGT(0.293)T(0.293)S(0.293)PDPFES(0.001)QPLTVASSKPSSAR 69.755 7.724e-05 7757200.0 295.42 498.77 314.57 593.62 531.53 323.56 146.53 498.47 536.92 596.8 522.48 True False 345.27967367444387 524.1552625810829 359.18075615364006 739.0569266486146 453.34264111353315 357.79890443825457 173.1526042849581 569.1296490003518 415.30847728505495 461.9824655043989 392.7337962855805 0.8791697504519578 1.3346324343320273 0.9145654373285919 1.881826656219832 1.1543255136206314 0.9110468918699254 0.4408905113912029 1.4491486456808602 1.0574808718093083 1.176324701041169 1.0 8.617407942695383 -7.004137808974031 24.998777989725664 1.0078664962644994 1.269745742479157 0.108107533078733 0.3322134248085999 287.8730162348091 1739220.8981002583 0.044853083337260825 0.08337410115262285 9.90517587060373e-08 7.004137808974031 0.2618792462146575 KTAESVTSLPSQNNGTTS(ph)PDPFESQPLTVASSKPSSAR ddPTM_A549_PD325901_60min_R1 1 KTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSAR 38 2 I3L356;I3L2H1;I3L2B2;O95208-5;O95208-3;O95208-2;O95208 I3L356 EPN2 Epsin-2 1 KTAESVTSLPSQNNGT(0.029)T(0.24)S(0.73)PDPFESQPLTVASSKPSSAR 110.4 3.5588e-15 14992000.0 609.86 599.16 451.67 459.74 760.79 758.22 931.67 626.51 524.33 714.67 591.8 True False 671.7725382447966 649.6533159522028 482.3230423123528 488.137095654704 707.3547349830172 752.04530770704 967.1252116793864 614.0137665624127 502.29423350669134 669.5456142336546 519.0123517292913 1.294328614736288 1.251710703584665 0.929309371357553 0.9405115196744078 1.3628861290606864 1.4489930831150915 1.8633953670987466 1.18304268581776 0.9677885927629718 1.2900379191416222 1.0 9.019625062782834 -8.639298796953879 5.03242558634099 0.9855075021199948 1.2925787849134964 0.0833878882255461 0.25381297775183453 0.23458310484133446 9.484597570814332 0.04363648807912208 0.049445623697055976 2.2945694287341188e-09 8.639298796953879 0.3070712827935016 KTAPTLS(ph)PEHWK ddPTM_A549_MK2206_60min_R1 2 KTAPTLSPEHWK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.004)APT(0.047)LS(0.949)PEHWK;KTAPT(0.036)LS(0.964)PEHWK 110.97 1.6239e-05 97892000.0 8790.1 7576.0 5704.7 5510.0 12193.3 9278.099999999999 10089.5 8189.0 12037.900000000001 11196.6 10968.8 True False 10273.65398268814 7961.586040287673 6513.712240931019 6859.950247353298 10399.681722366844 10259.902383695668 11922.631549396616 9349.815827760709 9311.334870576182 8667.280283623582 8244.94423652059 1.2460549990358305 0.9656324908811639 0.7900250206761664 0.8320189986206908 1.2613404559247285 1.2443871164403897 1.4460536308524543 1.1340059507432618 1.1293387321326036 1.0512236389947034 1.0 13.009294020900056 -6.756846993973454 24.998516864706474 1.1232674093473851 0.9469180200072617 0.26318963183023303 0.16127697540558783 159.91242609950876 870467.8469771437 0.025671784182124336 0.05206946129323614 1.7504632846642903e-07 6.756846993973454 -0.17634938934012345 KTAPTLS(ph)PEHWK ddPTM_A549_PD325901_60min_R1 2 KTAPTLSPEHWK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KTAPT(0.007)LS(0.993)PEHWK;KTAPT(0.008)LS(0.992)PEHWK 130.02 1.6646000000000002e-08 142679000.0 15934.8 13389.599999999999 12487.8 13682.6 12484.3 13775.7 11418.2 10145.8 19731.9 15605.900000000001 19941.9 True False 17552.48916542025 14517.98858280529 13335.297203241746 14527.743126560787 11607.445836496901 13663.515266518778 11852.72584927878 9943.434059773874 18902.63686253062 14620.540810680444 17489.17272211954 1.0036203223735467 0.8301129397872304 0.7624887360381458 0.8306706873668606 0.6636932472978732 0.7812556650685806 0.6777179251187777 0.5685479935364727 1.0808193825327936 0.8359766950090798 1.0 14.094174427647037 -8.78310330270275 24.999993867301466 1.0381647463384178 0.7633420372647366 0.3271162089686853 0.12299629204998734 121.46390578865734 140167.7601304412 0.018923723439505612 0.02015434449920526 1.6477704008623522e-09 8.78310330270275 -0.2748227090736812 KTAS(ph)EPNLK ddPTM_A549_MK2206_60min_R1 2 KTASEPNLK 9 1 P56524-2;P56524;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UQL6-2;Q9UKV0-5;Q9UKV0-7;Q9UQL6;Q9UQL6-3 P56524-2 HDAC4;HDAC9;HDAC5 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 1 KT(0.046)AS(0.954)EPNLK;KT(0.185)AS(0.815)EPNLK 57.106 0.0059303 21385000.0 4948.8 4971.5 5185.7 4659.3 6694.799999999999 5289.1 5337.299999999999 4778.6 7464.7 7237.5 7500.2 True False 5784.036453456394 5224.528115006623 5921.1102367865 5800.828709163924 5710.003788547935 5848.789051379564 6307.018322869763 5455.98118384874 5773.9573686764315 5602.543723337947 5637.693345010552 1.0259579759823862 0.9267137808462771 1.0502717821689922 1.0289365444641911 1.0128262463231312 1.0374436304798016 1.1187231970414948 0.967768349563988 1.0241701730347705 0.9937652476781639 1.0 12.46088929118616 -4.901304105018549 21.388555190636374 1.0156326573004888 2.3591829942623526 0.0036993318259803676 0.04620225059606477 17682.305064030894 1851695.9743374216 0.005782299352404308 599988.9492269779 1.2551507646000483e-05 4.901304105018549 1.3435503369618638 KTAS(ph)EPNLK ddPTM_A549_PD325901_60min_R1 2 KTASEPNLK 9 1 P56524-2;P56524;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UQL6-2;Q9UKV0-5;Q9UKV0-7;Q9UQL6;Q9UQL6-3 P56524-2 HDAC4;HDAC9;HDAC5 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 1 KT(0.265)AS(0.735)EPNLK;KT(0.234)AS(0.766)EPNLK 78.763 0.00075573 317460000.0 10283.900000000001 10637.8 10043.1 11007.5 11986.2 13410.099999999999 11257.5 11926.900000000001 11237.3 10760.8 11517.400000000001 True False 11327.91395739295 11534.284739362345 10724.685160066392 11687.408275153688 11144.330662145185 13300.892591704483 11685.910322840371 11689.00862302795 10765.035359763395 10081.361251550383 10100.832814814015 1.1214831653068529 1.1419142313142745 1.0617624661936218 1.157073727426988 1.1033081000806946 1.3168114783760423 1.1569254275451089 1.1572321646473245 1.0657572060766367 0.9980722814028685 1.0 13.302186627800676 -9.027017810505102 1.649346579370256 1.0220916122238737 1.1534704765577415 0.4804503668379595 0.0611143210852899 0.2208164371530712 1.218335868855647 0.012810914726052572 0.012486987874267932 9.396847731106139e-10 9.027017810505102 0.1313788643338678 KTAVQYIES(ph)SDSEEIETSELPQK ddPTM_A549_PD325901_60min_R1 1 KTAVQYIESSDSEEIETSELPQK 23 1 A0A0C4DGA6;Q14527-2;Q14527 A0A0C4DGA6 HLTF Helicase-like transcription factor 1 KTAVQYIES(0.499)S(0.499)DS(0.001)EEIETSELPQK 123.14 5.2942e-16 3521300.0 1416.6 1904.3 1400.1 1453.0 2127.4 1881.1 1782.2 2102.8 2255.7 2064.5 1995.6 True False 1560.4121891541972 2064.782044141432 1495.1192054852534 1542.7485099975754 1977.9787631315744 1865.7809452767167 1850.02259625726 2060.858004385313 2160.9007734080496 1934.1471176702253 1750.1538511506815 0.8915857243797544 1.1797717342300453 0.8542787278399843 0.8814930807273073 1.130174219729942 1.0660668169544143 1.057062837670481 1.1775296229130665 1.2346918940796618 1.1051297669622433 1.0 10.773266035597338 -6.77645379863925 24.96747922283796 1.1118772008420603 0.9611027304026951 0.3704394523370509 0.0989910688280476 232.9482360192161 387369.54366010596 0.016722861231268923 0.03169265861974196 1.673193625559863e-07 6.77645379863925 -0.1507744704393652 KTDPSSLGATSAS(ph)FNFGK ddPTM_A549_PD325901_60min_R1 1 KTDPSSLGATSASFNFGK 18 1 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 KTDPSSLGAT(0.019)S(0.162)AS(0.818)FNFGK 93.572 1.6575e-06 3491100.0 2881.4 2886.9 3196.8 3121.0 3748.2 3657.5 3618.6 4338.9 3932.5 3384.4 3593.8 True False 3173.9176068254337 3130.1891945764296 3413.7540719200483 3313.7770816947245 3484.939362588025 3627.714532640259 3756.307803173898 4252.3572356988 3767.2307006371234 3170.7084064146834 3151.7853829752034 1.0070221227529579 0.9931479508359203 1.0831175531049495 1.0513968049964764 1.1057032567675444 1.151003032197513 1.1918031676471705 1.3491899729811823 1.1952687898694916 1.0060039060850068 1.0 11.621953584221934 -6.23547814855373 1.204099890290091 1.1267191099582814 0.9996867299459898 0.24405493419524582 0.0921913550375646 0.8173788950072431 2.0721877778507523 0.016854847116555036 0.0823263014767079 5.814626877596893e-07 6.23547814855373 -0.12703238001229156 KTDS(ph)IEKR ddPTM_A549_PD325901_60min_R1 2 KTDSIEKR 8 2 C9J6V4;A0A2R8YDK5;A0A2R8Y5C0;A0A2R8YGB3;Q9UNA1-2;Q9UNA1 C9J6V4 ARHGAP26 Rho GTPase-activating protein 26 1 KT(0.219)DS(0.781)IEKR;KT(0.147)DS(0.853)IEKR 60.434 0.0023224 9578800.0 3603.4 3267.4 3532.7 3629.6000000000004 4333.9 3525.6 3257.8 3694.3 4086.7999999999997 4102.5 5009.2 True False 3969.214515317126 3542.7552649412964 3772.4502658508377 3853.792148580316 4029.5018151433324 3496.888682508953 3381.7773617365647 3620.6142883777165 3915.0460082298255 3843.46744986297 4393.100155935053 0.9035110456006198 0.8064362612254706 0.8587216616844664 0.877237488741035 0.9172342246054869 0.7959956655631163 0.7697929119981028 0.8241592861219627 0.8911806854529871 0.8748872808352588 1.0 12.101023675698425 -9.830178164351938 0.8385773820083715 0.9876661174480335 0.8447198039096908 0.19599708251701087 0.05562391696525529 0.27047269337966945 0.39421790643132065 0.01833641669875267 0.009841081654616366 1.4785017252888507e-10 9.830178164351938 -0.14294631353834264 KTEAELSQDLETS(ph)PTAKPQIK ddPTM_A549_MK2206_60min_R1 2 KTEAELSQDLETSPTAKPQIK 21 2 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 KTEAELSQDLET(0.161)S(0.839)PT(0.001)AKPQIK;KTEAELSQDLET(0.194)S(0.801)PT(0.005)AKPQIK 123.53 9.3793e-16 16011400.0 5173.5 5500.6 4893.9 5073.5 7594.8 5771.6 5357.200000000001 5141.5 8411.7 8098.1 8274.8 True False 6046.660320068839 5780.557045037801 5587.928609022786 6316.5077277580685 6477.614980770725 6382.346881121988 6330.533895279999 5870.323370183378 6506.463380724684 6268.733585625293 6219.9387871381105 0.9721414513873375 0.9293591533394373 0.8983896466276765 1.0155257059474039 1.0414274484767359 1.0261108830073558 1.0177807389954678 0.9437911804409258 1.0460655005446458 1.0078449001118923 1.0 12.602684666958988 -6.278562940417889 23.500554528449776 1.0177178119023662 0.9329029975609736 0.5709879556075119 0.030242836577268322 182.4883965085901 250448.98791145455 0.004439765692202757 0.010345336607780491 5.265468992028906e-07 6.278562940417889 -0.0848148143413926 KTEAPAAPAAQET(ph)KSDGAPASDSKPGSSEAAPSSK ddPTM_A549_MK2206_60min_R1 1 KTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSK 35 3 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 KT(0.017)EAPAAPAAQET(0.475)KS(0.475)DGAPAS(0.019)DS(0.004)KPGS(0.005)S(0.005)EAAPSSK 46.645 0.0019491 12458000.0 328.15 360.23 544.58 493.9 380.69 300.07 464.86 310.72 557.79 658.52 312.93 True False 383.5336975027716 378.564168333267 621.8096327880895 614.9055221720131 324.6910052969936 331.8232082296549 549.3190447546965 354.7655115400913 431.45145560759624 509.7598746379972 235.22084457136478 1.6305259774135767 1.6093988992476922 2.6435141576044963 2.614162547084359 1.380366633274646 1.410687938113331 2.335333187650536 1.5082231006634164 1.8342398880244482 2.167154341984087 1.0 7.87787210295596 -11.506910086538914 0.2973363164529085 0.27648950770908615 2.003142667373023 0.0 0.555591570374195 5.038278224923188 0.384440773191439 3.074507562709888 0.2040084481478764 3.1123606329971315e-12 11.506910086538914 1.726653159663937 KTEAPAAPAAQET(ph)KSDGAPASDSKPGSSEAAPSSK ddPTM_A549_PD325901_60min_R1 1 KTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSK 35 3 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 KTEAPAAPAAQET(0.491)KS(0.491)DGAPAS(0.014)DS(0.002)KPGSSEAAPSSK 70.137 7.1929e-05 6669800.0 548.29 489.46 440.72 554.79 338.48 425.2 438.41 652.74 611.59 595.24 572.51 True False 603.9519971702352 530.7085119600193 470.6299094646533 589.0581182804915 314.70633249260834 421.73731217461057 455.0939324571571 639.7205886353759 585.8869991615153 557.6564448157063 502.09489943990627 1.2028642351156165 1.056988454875825 0.9373325839191902 1.1732007613253868 0.626786555377614 0.8399553802380074 0.906390271968149 1.2741029421907948 1.1668849849203413 1.1106594499123168 1.0 8.971816259153876 -8.205726210686217 24.99986317938409 1.0956564075254096 0.9563391513807512 0.19501426584877968 0.1621537175282865 469.98444417219883 210893.6548966726 0.02732010176172704 0.03527009241979953 6.226927213891028e-09 8.205726210686217 -0.1393172561446584 KTEAPAAPAAQETK ddPTM_A549_MK2206_60min_R1 2 KTEAPAAPAAQETK 14 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 ; 103.6 2.5336999999999998e-05 17965600.0 5364.9 6411.4 6235.9 5137.8 6803.3 5233.8 5630.5 5446.4 7953.1 8460.7 8273.3 False True 6270.363960788114 6737.71287469646 7120.244388525549 6396.561230644607 5802.543582277014 5787.637242084738 6653.488967627495 6218.443878900463 6151.735548490963 6549.421993788649 6218.811278536008 1.0082897968668125 1.08344064048887 1.1449526395986325 1.0285826252232635 0.9330631405883426 0.930666164779843 1.0698972310981298 0.9999409212437731 0.9892140592404606 1.0531630082414194 1.0 12.60242312121449 -6.516739541708976 24.905287412698897 0.9920130637133374 1.0805854342536607 0.3472882025627234 0.0491345274864102 181.13403948753665 734815.3121504419 0.006291034748481534 0.013458786950125222 3.0427092746516655e-07 6.516739541708976 0.0885723705403233 KTEAPAAPAAQETK ddPTM_A549_PD325901_60min_R1 2 KTEAPAAPAAQETK 14 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 ; 107.75 1.6793e-05 30197000.0 8915.7 8823.3 9101.400000000001 8428.599999999999 10711.0 9831.3 9442.7 10125.5 10942.400000000001 10857.3 11620.6 False True 9820.815300608561 9566.870456374041 9719.075735164271 8949.215479260534 9958.696310944017 9751.237152357122 9802.047115743704 9923.538959198919 10482.528981221018 10171.768225081594 10191.339869052717 0.9636431938091575 0.9387254845091609 0.9536602507661888 0.878119618641701 0.9771724266781493 0.9568160102253068 0.9618016121225483 0.9737226985563489 1.0285722109074718 0.9980795808772353 1.0 13.315056116564826 -8.332489556221397 1.5786668709036193 1.0133964913823925 0.9429817555760356 0.524585921364053 0.02546990176239091 0.1866947198001669 0.9037064699755498 0.004597409664724879 0.005800164230312656 4.650615596878558e-09 8.332489556221397 -0.07041473580635693 KTEAPAAPAAQETKS(ph)DGAPASDSKPGSSEAAPSSK ddPTM_A549_MK2206_60min_R1 1 KTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSK 35 3 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 KTEAPAAPAAQET(0.034)KS(0.966)DGAPASDSKPGSSEAAPSSK 154.27 2.4215e-51 28188000.0 1273.5 1240.3 1299.9 985.96 1357.8 1437.9 1553.4 1195.4 1879.7 2305.3 1852.4 True False 1488.4356659143064 1303.4259722503707 1484.2453664498084 1227.520244261426 1158.0694186667843 1590.057623599228 1835.6326724647113 1364.851610758963 1453.9509512640939 1784.5311288996163 1392.3979563608366 1.0689728889034522 0.9361016125425791 1.0659634766550676 0.8815872205598936 0.8317086457764618 1.1419563037531264 1.3183247390439372 0.9802166144556341 1.0442064674269789 1.2816243522531854 1.0 10.443355886377077 -7.274963889322783 24.897958714796793 1.0503281362469463 0.9575918713166719 0.18896595563536767 0.13053635392233967 1197.7778401684468 2205047.0753458883 0.01736855592579349 0.02785689590457302 5.3092858799662106e-08 7.274963889322783 -0.09273626493027443 KTEAPAAPAAQETKS(ph)DGAPASDSKPGSSEAAPSSK ddPTM_A549_PD325901_60min_R1 1 KTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSK 35 3 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 KTEAPAAPAAQET(0.052)KS(0.948)DGAPASDSKPGSSEAAPSSK 205.44 1.3479000000000001e-89 37923000.0 3109.4 3180.7 2842.2 2745.7 4407.6 3640.1 2834.7 3389.5 3603.1 4301.8 3062.2 True False 3425.063998980704 3448.748751667621 3035.088783537027 2915.2956530628644 4098.025381394534 3610.456232471309 2942.576059707361 3321.893763488688 3451.674237117765 4030.18361385022 2685.568812885154 1.2753588671969636 1.2841781357903728 1.1301474640958382 1.0855412228037125 1.525943167694129 1.3443916294933929 1.0956993712427348 1.2369423369643315 1.2852674712920764 1.5006815667927431 1.0 11.39101197310257 -10.797773757692616 0.7637238323885032 0.9776269258659396 1.2532380397239622 0.0 0.19005595664828565 0.7169838891658841 0.6410883473425814 0.12573126891654476 0.022960143263118304 1.5930383917965085e-11 10.797773757692616 0.2756111138580226 KTEDS(ph)FYNNSYNPFK ddPTM_A549_PD325901_60min_R1 1 KTEDSFYNNSYNPFK 15 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KT(0.034)EDS(0.962)FYNNS(0.003)YNPFK 98.26899999999999 5.2473000000000006e-06 6520100.0 6404.4 7026.0 7077.9 7958.1 8039.5 8478.8 8688.7 9759.1 8853.3 9328.8 9687.8 True False 7054.569973329909 7618.105677749148 7558.248856870283 8449.653762843573 7474.833254769342 8409.751463937182 9019.35323313908 9564.447094634159 8481.22658918007 8739.777975937037 8496.26201602404 0.8303145500956673 0.8966420366252029 0.8895969595353045 0.994514263673535 0.8797790417329088 0.9898178102412922 1.061567218163527 1.1257241215719938 0.9982303480265071 1.028661540740354 1.0 13.052612542728559 -7.374570655133622 4.623197405045459 1.015259834470458 0.903162423164729 0.6212079979352457 0.051895539460119024 0.1514388091696818 5.1706245961631625 0.008274571783920794 0.013387090226399261 4.221136000320488e-08 7.374570655133622 -0.11209741130572903 KTEFLDLDNSPLS(ph)PPSPR ddPTM_A549_PD325901_60min_R1 1 KTEFLDLDNSPLSPPSPR 18 1 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KTEFLDLDNS(0.037)PLS(0.649)PPS(0.315)PR 62.06399999999999 0.0012342 2954600.0 4863.1 4969.6 4542.2 5241.2 6600.6 5851.6 5436.9 5229.7 6555.9 5414.0 6419.0 True False 5356.798331974995 5388.40563281272 4850.461006467482 5564.937020371158 6136.996626833818 5803.946509691794 5643.804204685839 5125.389530879715 6280.378321756366 5072.15911604098 5629.5036933935735 0.9515578324002862 0.9571724127539358 0.8616143217313585 0.9885306633516935 1.0901487877227625 1.0309872460875966 1.0025402792272875 0.9104514021181911 1.1156184743473243 0.9009957879578874 1.0 12.458792022128932 -6.516869714592263 12.245856351151126 1.040859576988229 0.9265158734938209 0.11329783447405894 0.06980556267038518 0.3005105990224356 596.186839763386 0.009038712613484236 0.019618984013471705 3.0417974074679133e-07 6.516869714592263 -0.11434370349440803 KTEFLDLDNSPLSPPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 KTEFLDLDNSPLSPPSPR 18 1 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KTEFLDLDNS(0.001)PLS(0.055)PPS(0.943)PR;KTEFLDLDNSPLS(0.017)PPS(0.983)PR 87.509 3.1639999999999997e-06 6087600.0 2667.9 3319.5 3377.1 2847.1000000000004 4195.6 3078.3 2634.7 3209.6 4352.4 4231.7 4083.9 True False 3118.1762961074046 3488.4483712691285 3856.0235610721224 3544.6396278111783 3578.4327978777123 3404.0436627898357 3113.3908858908017 3664.570628987759 3366.588349354602 3275.7560309567107 3069.7549200939416 1.0157736944068425 1.1363931199961637 1.256134011165334 1.1546979221724658 1.1657063482345373 1.1088975346232735 1.0142148044168702 1.1937665137370688 1.0966961327491176 1.0671066962102842 1.0 11.583907764466364 -10.18787530729017 0.38755981314699617 0.9744317475851954 1.1445568102754338 0.1890772220110587 0.0699334085728067 1.4750557775843485 0.37447038254780246 0.10128709778247558 0.02460572046447533 6.488206933342632e-11 10.18787530729017 0.17012506269023842 KTEFLDLDNSPLSPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 KTEFLDLDNSPLSPPSPR 18 1 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KTEFLDLDNSPLS(0.006)PPS(0.994)PR;KTEFLDLDNSPLS(0.069)PPS(0.931)PR 103.29 2.7118999999999997e-09 9712000.0 3492.1 3121.8 2603.78 3529.9 3995.7999999999997 4103.5 3383.2 3574.6 3738.4 3878.0 4136.9 True False 3846.615421251853 3384.885041958054 2780.4881686010986 3747.933906015446 3715.148792761655 4070.0824565110906 3511.9495273580774 3503.301798780548 3581.288048636192 3633.14241817638 3628.0875259697586 1.0602322556216952 0.9329667538969588 0.7663784703920273 1.0330329351725476 1.0239964626455988 1.1218258731018873 0.9679891960212182 0.9656056458682439 0.9871007860205749 1.0013932663339675 1.0 11.824993545313353 KTEGT(ph)PNQGK ddPTM_A549_PD325901_60min_R1 2 KTEGTPNQGK 10 1 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KT(0.003)EGT(0.997)PNQGK;KT(0.39)EGT(0.61)PNQGK 76.32600000000001 0.00091457 12435300.0 4682.4 4078.8999999999996 3767.2 3629.3 4263.6 4104.1 2694.2 3646.9 3646.2000000000003 4627.9 5925.700000000001 True False 5157.753800999303 4422.643217900797 4022.864846013894 3853.473618261664 3964.139444621503 4070.677570310018 2796.7292553228103 3574.1597185622963 3492.962894002055 4335.693604197645 5196.876466107232 0.9924718885732464 0.8510195011838753 0.7740928367741744 0.7414980216276228 0.7627927025925398 0.7832931178676249 0.5381558083133976 0.6877515257235955 0.6721273666561658 0.8342883715774249 1.0 12.343429050065305 -10.849017815267663 1.116408869355603 0.9988281481114797 0.7464756849021605 0.17438246054292306 0.11677862398059766 0.3986081708653486 0.888380028906109 0.07700011242741334 0.019172148283281107 1.4157357036312924e-11 10.849017815267663 -0.25235246320931914 KTEMDKS(ph)PFNSPSPQDSPR ddPTM_A549_PD325901_60min_R1 2 KTEMDKSPFNSPSPQDSPR 19 2 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 KT(0.009)EMDKS(0.99)PFNSPSPQDSPR;KT(0.015)EMDKS(0.985)PFNSPSPQDSPR 90.475 1.983e-06 52967000.0 6276.299999999999 6480.5 6716.299999999999 5934.5 6913.200000000001 7205.2 6136.5 6467.5 7179.3 6968.799999999999 7674.0 True False 6913.465355632139 7026.63447831673 7172.108506392841 6301.060586772617 6427.640681245278 7146.5232400764435 6370.027865521649 6338.500638844404 6877.578987688267 6528.788778697148 6730.146649494051 1.0272384415504332 1.0440536951516453 1.065668978688899 0.9362441734083623 0.955052098564373 1.0618673874831084 0.9464916884092749 0.9418072099990437 1.021906259383709 0.9700812060593003 1.0 12.716422226079068 -6.220006292111757 24.997999300607976 0.9968556669180879 1.0454937076192294 0.29204874001655745 0.039670627212632543 593.0757650633617 357821.9742948738 0.005575086975290526 0.014750146660937711 6.025508561803599e-07 6.220006292111757 0.04863804070114153 KTEMDKSPFNS(ph)PSPQDSPR ddPTM_A549_PD325901_60min_R1 1 KTEMDKSPFNSPSPQDSPR 19 2 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 KTEMDKS(0.002)PFNS(0.492)PS(0.492)PQDS(0.014)PR 48.983999999999995 0.0036722 4329600.0 1515.2 1716.0 1547.2 1855.8 2268.8 2122.7 2103.3 2461.4 2181.3 1647.5 2553.8 True False 1669.021988568715 1860.613342302523 1652.2022960694142 1970.4285511724013 2109.447314935094 2105.4134349789424 2183.3422324699227 2412.305446069054 2089.627546675082 1543.4765688358918 2239.6987898720245 0.7451993081016408 0.8307426653602995 0.7376895069733106 0.879773905349563 0.9418441999763847 0.9400431185209708 0.9748374390087865 1.077066906040027 0.9329948991911018 0.6891447081257233 1.0 11.129089006419289 -6.599272185375563 1.7975281892086867 0.9751499839424925 0.774192619902792 0.3135943481875568 0.09652354392127101 0.11810720632371968 0.7619922441665122 0.006715629258522125 0.017856767625048182 2.5160995184838534e-07 6.599272185375563 -0.20095736403970055 KTES(ph)PIK ddPTM_A549_MK2206_60min_R1 2 KTESPIK 7 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KT(0.041)ES(0.959)PIK;KT(0.15)ES(0.85)PIK 61.593 0.011675 82040000.0 11239.9 10657.6 8528.5 7879.5 8934.5 8557.6 7628.700000000001 9076.8 11532.599999999999 14430.8 14645.1 True False 13136.920330828598 11200.026317709859 9737.969542093391 9809.977853724195 7620.246885460579 9463.159551924864 9014.736042507751 10363.464196534182 8920.484513777881 11170.872257374123 11008.317485802243 1.1933631408952075 1.0174149076055325 0.8846010804696306 0.8911423445387014 0.6922263002760085 0.8596372301334682 0.8189022576914525 0.9414212671373489 0.8103404108105436 1.0147665410069733 1.0 13.426306363403715 -5.411429629828688 2.0949716171526838 0.8837552790307802 1.2298787546622572 0.5477909638785226 0.08600088814963265 0.31738391121050513 1.919146752610209 0.013121672286749856 0.182811762798703 3.877665745208823e-06 5.411429629828688 0.34612347563147694 KTES(ph)PIK ddPTM_A549_PD325901_60min_R1 2 KTESPIK 7 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KT(0.084)ES(0.916)PIK;KT(0.043)ES(0.957)PIK 55.806000000000004 0.01637 129114000.0 16156.7 24105.0 14228.400000000001 27279.0 18022.8 13478.6 12677.5 13546.6 25536.0 20211.0 20679.2 True False 17796.916290066096 26136.41294650485 15194.024786319822 28963.961874895995 16756.940703284643 13368.834750415584 13159.94919989418 13276.402435897891 24462.81072383205 18934.87401076916 18135.789496249323 0.9813146702958088 1.441151098048979 0.8377922995556444 1.597060987109828 0.9239708426672111 0.7371520690169239 0.7256342053714177 0.7320553890771392 1.3488693574046624 1.0440611926315695 1.0 14.146551930346009 KTES(ph)PIKLSPAT(ph)PSR ddPTM_A549_MK2206_60min_R1 1 KTESPIKLSPATPSR 15 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 2 KT(0.181)ES(0.804)PIKLS(0.05)PAT(0.818)PS(0.147)R 52.451 0.0096792 10462000.0 977.12 1323.0 1271.5 1166.2 1444.0 1484.9 1339.5 1119.6 1612.1 2034.2 1832.6 True False 1142.0339677096094 1390.3350490101107 1451.8178194022105 1451.9190523527084 1231.5895128552327 1642.0311324031534 1582.8698112311567 1278.3067286311982 1246.9619239947044 1574.6728071867435 1377.5148428130365 0.8290538382711367 1.0093067644707872 1.0539398736622243 1.0540133632155502 0.8940662376749362 1.1920242754335377 1.1490764106750115 0.9279803664552576 0.9052257625393505 1.1431258366487644 1.0 10.427852148676228 KTES(ph)PIKLSPAT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 KTESPIKLSPATPSR 15 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 2 KT(0.023)ES(0.977)PIKLS(0.001)PAT(0.959)PS(0.039)R;KT(0.029)ES(0.971)PIKLS(0.027)PAT(0.954)PS(0.019)R 130.83 1.2729000000000002e-09 39994000.0 5768.5 5746.1 6209.0 5444.7 6148.0 6794.2 6884.9 6947.799999999999 6501.4 6741.5 6440.2 True False 6354.113873454745 6230.344012939705 6630.380077750117 5781.006753189128 5716.185689448585 6738.87028780983 7146.908637061843 6809.22067855634 6228.168767227513 6315.840539488414 5648.096227791449 1.125000994527915 1.1030874407350404 1.1739141491827534 1.0235319158947211 1.0120552941931305 1.1931224285186979 1.2653659478915198 1.2055780220336156 1.1027023117244035 1.1182246698296907 1.0 12.463548952976367 -9.966740427745929 1.022500547696865 1.0137019047819518 1.1334855415264176 0.06682502079072261 0.07852192958696703 0.44942935720376315 0.9518962256170607 0.02766798660393557 0.015169248723949034 1.0795917876326505e-10 9.966740427745929 0.1197836367444658 KTES(ph)PIKLSPATPS(ph)R ddPTM_A549_MK2206_60min_R1 1 KTESPIKLSPATPSR 15 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 2 KT(0.15)ES(0.849)PIKLS(0.018)PAT(0.168)PS(0.815)R 46.578 0.025215 5777700.0 2094.9 2297.5 2008.1 1945.5 3268.3 2235.6 2088.9 2094.6 3708.0 3304.1 3712.7 True False 2448.4679046123906 2414.432936584072 2292.8787755733993 2422.1475873368136 2787.5373994908296 2472.169708128822 2468.426090840436 2391.5159644434702 2868.143920459255 2557.7015152028894 2790.7341246927645 0.8773562063644976 0.865160502113357 0.821604163322375 0.8679248825265542 0.9988545217641301 0.8858492416940601 0.8845077963534731 0.8569486943535889 1.0277381478520504 0.9164977389182389 1.0 11.446428968987782 -8.764578152181954 24.99980878490101 1.0130985772936492 0.8832839668634362 0.3953154663866758 0.05061413651238253 35.82570382575412 285344.8087695935 0.007504365837593911 0.008155888389345983 1.7195778718325349e-09 8.764578152181954 -0.12981461043021292 KTES(ph)PIKLSPATPS(ph)R ddPTM_A549_PD325901_60min_R1 1 KTESPIKLSPATPSR 15 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 2 KT(0.166)ES(0.834)PIKLS(0.069)PAT(0.188)PS(0.743)R 72.145 0.0010218 8199700.0 3022.7 3532.0 3203.2 3551.2 4290.5 4811.8 4347.5 4358.3 4546.0 3993.3 4577.0 True False 3329.562278805871 3829.654035555077 3420.5884144063753 3770.549558639633 3989.150081421464 4772.614296147209 4512.946491543286 4271.370287479791 4354.947429140845 3741.16235649916 4014.05801599352 0.829475375178844 0.954060459588848 0.8521522112479346 0.9393360892185271 0.9937948244711927 1.1889749169372528 1.12428531764165 1.0641027784005717 1.0849238879430974 0.9320150186153163 1.0 11.970845753076937 -6.78034395722079 2.794737199041264 1.0599260916822593 0.8889461269477295 0.575147018034056 0.06913310841382492 0.14136444647205756 2.260574721619953 0.009461005298610468 0.02018544183471554 1.6582730502762022e-07 6.78034395722079 -0.1709799647345298 KTES(ph)PIKLSPATPSR ddPTM_A549_MK2206_60min_R1 2 KTESPIKLSPATPSR 15 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KT(0.011)ES(0.976)PIKLS(0.002)PAT(0.01)PSR;KT(0.003)ES(0.996)PIKLS(0.001)PATPSR 111.57 4.5003e-07 176498000.0 5868.9 6103.3 6240.1 6180.5 8032.0 6408.1 5859.9 5541.8 8358.8 9321.9 8609.9 True False 6859.4268391711585 6413.931900697961 7125.0400116804785 7694.7227774531875 6850.503439926062 7086.200888647483 6924.5679782257985 6327.367121050715 6465.54514626074 7216.076315659279 6471.8242088486095 1.0598907847021863 0.9910547155975753 1.1009322536818535 1.1889573216362348 1.0585119772814136 1.0949309900845061 1.0699561290243598 0.9776790773148032 0.9990297847430274 1.1149988137491575 1.0 12.659956705707682 -8.17690973865058 5.250830579553935 0.9979464981686714 1.0826173075252206 0.14545393144038243 0.05677856475682312 0.1621501868821903 7.585297710734751 0.007367516519579792 0.009541709374925187 6.654114372433277e-09 8.17690973865058 0.08467080935654914 KTES(ph)PIKLSPATPSR ddPTM_A549_PD325901_60min_R1 4 KTESPIKLSPATPSR 15 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KT(0.286)ES(0.714)PIKLSPATPSR;KT(0.072)ES(0.926)PIKLS(0.001)PATPSR;KT(0.163)ES(0.623)PIKLS(0.193)PAT(0.01)PS(0.012)R;KT(0.006)ES(0.994)PIKLSPATPSR 118.37 2.5166e-07 349712000.0 16688.1 15682.3 17809.5 16526.1 19394.9 19755.199999999997 18605.3 19443.3 18299.0 18931.4 19992.0 True False 18382.26362687008 17003.90245803663 19018.159767223504 17546.879663503736 18032.669132772662 19594.320201015675 19313.33487271081 19055.488128526227 17529.956666486636 17736.068173147058 17533.110739729622 1.048431387889218 0.9698166349629095 1.084699689036287 1.000785309804889 1.0284922852800475 1.1175609674679918 1.1015349848300018 1.0868287100558223 0.9998201076072691 1.0115756659745232 1.0 14.09779436256298 -8.78677193300606 24.1907335699463 0.9999150298831179 1.0539113218530383 0.2276510428215791 0.04162298696487939 160.57813943276125 153339.41437873815 0.007459921307205664 0.007943447888806543 1.6339097599895357e-09 8.78677193300606 0.053996291969920396 KTES(ph)PSLGK ddPTM_A549_MK2206_60min_R1 1 KTESPSLGK 9 1 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 KT(0.161)ES(0.63)PS(0.209)LGK 49.928999999999995 0.012214000000000001 9465800.0 4784.6 4414.6 4177.6 3966.4 6534.6 5565.1 4634.4 5264.7 7585.6 7769.6 8178.0 True False 5592.123507760971 4639.284283718845 4770.046498100409 4938.168178058461 5573.368996332279 6153.995188185594 5476.410491354736 6010.987347467552 5867.473711714059 6014.441963778449 6147.176898682208 0.909705967459595 0.7547016069626017 0.7759735203200319 0.8033229333480014 0.906655052911697 1.0011091741161455 0.890882201963105 0.9778451875618137 0.954498920142007 0.9784071717649423 1.0 12.585708287087112 -6.918995988460266 3.1024816626896174 0.9719311170385524 0.8037468883184092 0.7137048945625583 0.04597338818862225 0.09428428963677492 1.8336469690261261 0.006629200565098841 0.013171043425637638 1.2050470712336498e-07 6.918995988460266 -0.16818422872014316 KTES(ph)PSLGK ddPTM_A549_PD325901_60min_R1 2 KTESPSLGK 9 1 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 KT(0.066)ES(0.925)PS(0.009)LGK;KT(0.068)ES(0.812)PS(0.12)LGK 66.708 0.0021941 35362000.0 13749.3 12744.599999999999 12843.7 11095.1 14153.3 12636.2 13025.7 12708.5 14582.4 13837.5 14645.6 True False 15145.1188143003 13818.63216917759 13715.350717442292 11780.419128199654 13159.221034234331 12533.294976718755 13521.400141436547 12455.018997874613 13969.55243966199 12963.797888477478 12844.284046107638 1.1791329715173897 1.0758585001368932 1.0678174562480673 0.9171721121948887 1.0245196218797523 0.975787745874156 1.0527173093415123 0.9696935191688641 1.087608494916099 1.0093048271075926 1.0 13.648838854691485 -5.330381020693385 1.8149128705089013 1.0254348887762454 1.2137103111455103 0.5186690354101668 0.04686493230295693 0.5317067383204457 1.9550821777957053 0.007229193252123687 0.1620757300238399 4.673249619723626e-06 5.330381020693385 0.18827542236926487 KTESAS(ph)VQGR ddPTM_A549_PD325901_60min_R1 1 KTESASVQGR 10 1 Q9P2E9;A0A087WVV2;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KT(0.002)ES(0.043)AS(0.954)VQGR 51.00899999999999 0.010888 4313300.0 1493.4 1175.6 1379.5 1483.8 1566.9 1856.5 1488.9 1681.5 1954.6 1778.7 1857.5 True False 1645.0088686170263 1274.671937768559 1473.1211656073915 1575.4509560457 1456.8463495115464 1841.3812795206127 1545.5609042573424 1647.9611633887696 1872.4549593045951 1666.3925784451587 1629.0392756626534 1.0098030742370387 0.7824685118472995 0.9042883051473156 0.9671043415480851 0.8942978670167033 1.1303479953063647 0.9487560719668013 1.0116153661908607 1.1494228452797286 1.022929651445826 1.0 10.669805671902234 -7.091959553895404 1.1405653919837118 1.063655096209758 0.8907315463861415 0.3448540517170128 0.0803964128908016 0.34700286538560227 0.8871152513024295 0.013825088169503374 0.03290442480659426 8.09171254271795e-08 7.091959553895404 -0.17292354982361646 KTESHHK ddPTM_A549_MK2206_60min_R1 1 KTESHHK 7 1 A0A0U1RR32;A0A0U1RRH7;P20671;Q99878;Q96KK5;Q6FI13;P0C0S8;Q93077 A0A0U1RR32;Q99878;Q93077 HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;HIST1H2AC Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-C 0 41.983999999999995 0.032083 8875500.0 143.6 205.11 455.55 1995.3 1128.3 837.15 822.4 1064.0 1570.2 0.0 42.055 False True 167.8361693170745 215.54922290435658 520.1538400540123 2484.148589572421 962.3285646499719 925.7366573448041 971.8194346819732 1214.8252583633396 1214.5522070941531 0.0 31.611582841046726 5.309325071161704 6.818678583360025 16.454533221873586 78.58349270466854 30.442277107377745 29.28472965114426 30.74251104630211 38.42975103372312 38.42111333688398 0.0 1.0 4.98238136991962 -2.000017109214336 24.99984013261564 9.999999999998092 0.00016941004440695906 0.0 26.6194211238101 0.0 0.0 4.002009941405275 0.0 0.009999606053541067 2.000017109214336 -9.999830589953685 KTESHHK ddPTM_A549_PD325901_60min_R1 1 KTESHHK 7 1 A0A0U1RR32;A0A0U1RRH7;P20671;Q99878;Q96KK5;Q6FI13;P0C0S8;Q93077 A0A0U1RR32;Q99878;Q93077 HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;HIST1H2AC Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-C 0 37.558 0.044584 10653000.0 149.77 309.6 382.42 845.77 904.11 1244.7 6114.2 5161.6 76.46600000000001 358.92 248.72 False True 164.97454014515336 335.6910785412946 408.3733208782739 898.0112920169645 840.6084326101754 1234.5635758789706 6346.879226818619 5058.6478388031355 73.2523999376779 336.2577299463298 218.12901676598392 0.7563163424614138 1.5389565474520759 1.8721641298937792 4.116881400425423 3.8537212750195824 5.659786094407841 29.096904762688048 23.19108165343367 0.33582143734808795 1.5415543284050022 1.0 7.7690378880426145 -3.7098984261635097 13.76241660112517 4.479878240986749 5.2432075379216565 0.0 9.654267840941145 0.0 0.0 1.3852378238297862 0.0 0.00019503006874294188 3.7098984261635097 0.7633292969349075 KTET(ph)QEKNPLPSK ddPTM_A549_MK2206_60min_R1 1 KTETQEKNPLPSK 13 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 KT(0.224)ET(0.769)QEKNPLPS(0.007)K 54.974 0.0064753 22065000.0 2665.5 2572.5 2804.7 2772.4 3593.9 2786.9 2197.6 3082.7 2994.2 3047.7 3328.8 True False 3115.3712347817695 2703.4292619641024 3202.448633957828 3451.6381244577665 3065.2420708105437 3081.8079082055024 2596.875473804846 3519.6821653728093 2316.0184807548803 2359.2224532804244 2502.167089793755 1.24506922319027 1.0804351447956007 1.2798700162832828 1.3794594847549821 1.225034924051855 1.231655520039441 1.0378505433939256 1.4066535283472712 0.9256050446038684 0.9428716662862379 1.0 11.288962417718142 -8.781462585325874 24.98002631763254 0.9648690144128577 1.229746373402677 0.5885802354302467 0.10394966231730195 117.49397398276538 146579.4253949607 0.017540581578427628 0.018685028219622826 1.6540072721389317e-09 8.781462585325874 0.26487735898981934 KTET(ph)QEKNPLPSK ddPTM_A549_PD325901_60min_R1 2 KTETQEKNPLPSK 13 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 KT(0.152)ET(0.848)QEKNPLPSK;KT(0.1)ET(0.9)QEKNPLPSK 92.307 6.187199999999999e-05 81896000.0 8255.5 7135.299999999999 6405.5 6270.3 7981.2 7012.3 9127.9 7316.200000000001 7931.8 8195.400000000001 8499.0 True False 9093.59228262211 7736.6167723375265 6840.215749400616 6657.602190115484 7420.628045645259 6955.194153720654 9475.267229478533 7170.272651552128 7598.454029577502 7677.941045364287 7453.676879599936 1.2200142868428439 1.0379597743916122 0.9176968441067912 0.8931970486052005 0.9955661032147598 0.9331225737402723 1.2712205509486887 0.961977929466803 1.019423588158726 1.030087723064323 1.0 12.863736563575529 KTET(ph)QEKNPLPSKETIEQEK ddPTM_A549_MK2206_60min_R1 1 KTETQEKNPLPSKETIEQEK 20 3 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 KT(0.151)ET(0.844)QEKNPLPS(0.005)KETIEQEK 75.71 8.4059e-05 10605000.0 2399.2 2666.9 2585.4 2467.6 2753.9 2344.1 2055.3 2461.2 3122.2 3092.4 2806.2 True False 2804.1263051916812 2802.633818749103 2952.04859636844 3072.162110774772 2348.8049580692723 2592.1511061123515 2428.721405765881 2810.082637108885 2415.0266851288793 2393.8246922349244 2109.343092820004 1.3293836904658378 1.3286761306346948 1.3995108744598839 1.4564544389350926 1.1135243792555003 1.228890224134603 1.1514112682915403 1.3322074757179756 1.1449188580792722 1.1348673908873657 1.0 11.04257805881348 -8.701669888716605 0.18257426206006014 0.8834291973530435 1.4763604955361824 0.4895486218418542 0.09592129628080306 1.3083986656939945 0.20635207694924884 0.28803629682525933 0.2736299328162036 1.9876051405094392e-09 8.701669888716605 0.5929312981831389 KTET(ph)QEKNPLPSKETIEQEK ddPTM_A549_PD325901_60min_R1 1 KTETQEKNPLPSKETIEQEK 20 3 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 KT(0.026)ET(0.974)QEKNPLPSKETIEQEK 99.135 1.0425000000000001e-07 19651000.0 3465.4 2619.4 3249.6 2941.1 3388.9 3376.2 4292.1 4472.2 4555.0 4149.9 3758.4 True False 3817.2048569073545 2840.1460307851 3470.137397432243 3122.765067277266 3150.875355070318 3348.705346575542 4455.438214227241 4382.9984626269725 4363.569190439185 3887.8746057736366 3296.1406264605753 1.1580831309998756 0.8616580275687065 1.0527880302117167 0.9474004361975655 0.9559286790666318 1.015947353608942 1.3517136309234261 1.3297364886198666 1.32384193666058 1.1795232808220535 1.0 11.68656207960111 -7.590351022158272 11.661172452597901 1.1864107594377458 0.9880641397239529 0.48126652432432604 0.11805719282336156 0.6121640258020999 103.71230016183057 0.023297849143145612 0.034559185589151394 2.5683190781845335e-08 7.590351022158272 -0.19834661971379286 KTETQEKNPLPSK ddPTM_A549_MK2206_60min_R1 2 KTETQEKNPLPSK 13 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ; 67.964 0.0013654000000000001 12194500.0 3489.7 4057.5 3889.1000000000004 3914.0 5229.799999999999 4283.4 3977.2 3832.1 5166.4 5295.700000000001 5205.200000000001 False True 4078.676045026429 4264.009419016266 4440.63285995842 4872.930175706137 4460.503347874167 4736.666544909198 4699.805758289332 4375.311910314054 3996.2186490454947 4099.3976919766155 3912.605183788288 1.0424450854193643 1.0898133644263435 1.134955522309788 1.2454438786455926 1.1400341047331 1.2106170498713678 1.201196015831798 1.1182605207504637 1.0213702792205193 1.047741210629249 1.0 11.933913821650469 -8.708139661621596 3.2858171126077695 1.0090370265668804 1.1547691330615595 0.5128199723874798 0.054482399728806696 0.1247939332248552 2.7127228201202214 0.009786441694184557 0.010855403580453855 1.958214844090471e-09 8.708139661621596 0.14573210649467905 KTETQEKNPLPSK ddPTM_A549_PD325901_60min_R1 2 KTETQEKNPLPSK 13 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ; 76.759 0.00032254 16509100.0 6322.200000000001 5565.4 6610.4 5554.0 7155.9 7432.4 5996.0 5575.4 6676.5 6772.6 6674.799999999999 False True 6964.0250898423465 6034.415789772997 7059.021495564408 5897.057965950816 6653.294270514824 7371.872998604363 6224.181061137097 5464.194273183312 6395.909923154164 6344.976880180857 5853.841915043376 1.1896503511558776 1.0308470705820698 1.2058783954216334 1.0073825107569752 1.1365688324136312 1.2593221862824662 1.0632642889009374 0.9334372797361106 1.0926003838125122 1.0838995948755206 1.0 12.515168070473242 -14.999999960393776 0.09153624366421037 0.650984543299369 1.1913423853581362 0.10955541627623877 0.08901177766362355 154.40615500776624 1.0291746211874804 10.499435071543287 0.7964088179115908 1.0000000911967054e-15 14.999999960393776 0.5403578420587672 KTETQEKNPLPSKETIEQEK ddPTM_A549_MK2206_60min_R1 1 KTETQEKNPLPSKETIEQEK 20 3 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 57.496 0.0015488 18062000.0 962.2 923.4 1285.3 1074.2 1102.7 880.47 1309.6 984.8 1325.0 1384.8 1228.8 False True 1124.5958364685875 970.3971158397093 1467.5748669112543 1337.379048222671 940.4942907378571 973.6407509913157 1547.5373682630257 1124.3984158235116 1024.889615590214 1071.9727182146307 923.6550468452795 1.2175496039453433 1.0506055471185658 1.5888776572203218 1.4479204685671945 1.0182310960678358 1.0541172857949093 1.6754494803537323 1.2173358654444277 1.1096021389053181 1.160576907879112 1.0 9.85121034539454 -8.826033854464791 2.756749817656721 1.0456522456399149 1.2899490567482383 0.1482543695751093 0.20733861255752528 0.30212692072387454 4.459205298427953 0.037732656976690045 0.04012791389167436 1.4926780466313717e-09 8.826033854464791 0.24429681110832346 KTEVVMNSQQT(ph)PVGT(ph)PK ddPTM_A549_MK2206_60min_R1 2 KTEVVMNSQQTPVGTPK 17 1 O75781-2;O75781 O75781-2 PALM Paralemmin-1 2 KT(0.005)EVVMNS(0.026)QQT(0.972)PVGT(0.997)PK;KTEVVMNSQQT(1)PVGT(1)PK 93.572 1.7931999999999998e-06 6728400.0 1837.4700000000003 2024.37 1462.03 1842.12 2920.4 1972.69 1861.02 1700.6999999999998 2502.73 2711.7 2230.18 True False 2147.5900141716224 2127.4017862166247 1669.3678383803492 2293.4394826959096 2490.8130286304877 2181.4387464343586 2199.1432445669348 1941.7794331753125 1935.8656510385622 2099.125086642557 1676.3647561632527 1.2810994780675762 1.2690566169415745 0.995826136431717 1.3681028990044952 1.4858419204250557 1.3012912246062034 1.3118524691488869 1.1583275215231335 1.1547997796548988 1.2521887488537333 1.0 10.71112038038965 -9.23707493780069 0.7446178234362228 1.0279771784764926 1.2841687184653905 0.12172585353437604 0.13231031706183416 0.4001806359575622 0.4814984686519208 0.038525104180392275 0.02926334919750503 5.79328724246665e-10 9.23707493780069 0.2561915399888979 KTEVVMNSQQT(ph)PVGT(ph)PK ddPTM_A549_PD325901_60min_R1 1 KTEVVMNSQQTPVGTPK 17 1 O75781-2;O75781 O75781-2 PALM Paralemmin-1 2 KTEVVMNSQQT(1)PVGT(1)PK 111.83 2.4783000000000004e-09 7884400.0 1134.3 1348.1 1346.6 1637.0 1532.0 1397.4 1599.6 1059.7 1115.5 1230.7 1324.0 True False 1249.4533009724735 1461.7091181573608 1437.9883737636185 1738.1137721032549 1424.3976051130826 1386.0200377064941 1660.4736533347066 1038.563452181432 1068.6194142557438 1152.9933919674238 1161.1563935275112 1.0760422178589764 1.2588391420011835 1.2384105894599704 1.4968817136018928 1.226706077710913 1.1936549162820893 1.4300172333291854 0.8944216799481675 0.9203061880487549 0.9929699378950249 1.0 10.181346583283492 -8.271751722398749 24.996958186903083 0.9562194055663453 1.2760056977225154 0.6674885945675818 0.1094562777799697 305.79157693899805 741232.6979513085 0.0175269188256824 0.021306400853526662 5.348700466816013e-09 8.271751722398749 0.31978629215617005 KTEVVMNSQQT(ph)PVGTPK ddPTM_A549_MK2206_60min_R1 6 KTEVVMNSQQTPVGTPK 17 1 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 KTEVVMNSQQT(1)PVGTPK;KTEVVMNSQQT(1)PVGTPK;KTEVVMNS(0.005)QQT(0.995)PVGTPK;KTEVVMNSQQT(1)PVGTPK;KTEVVMNSQQT(1)PVGTPK;KTEVVMNS(0.002)QQT(0.997)PVGTPK 117.37 4.0085e-10 21551900.0 4639.07 5027.79 5463.47 4408.65 6797.459999999999 5607.73 4720.11 5383.469999999999 8405.02 8287.81 8396.3 True False 5422.031601627864 5283.683035572594 6238.272199582695 5488.769447911821 5797.562638540814 6201.136266490094 5577.692888906528 6146.593358685425 6501.296390058912 6415.587964865973 6311.2669839087075 0.8591035073388512 0.8371826210242642 0.9884342106724179 0.869677904912922 0.9186051950143068 0.9825501412474859 0.8837675387727203 0.9739079925404619 1.0301095495777166 1.0165293246543434 1.0 12.623713939302167 -7.790102577094132 0.6126628743826255 1.0162414681282574 0.8821887543385118 0.5314185429504481 0.04546631231245546 0.4061924828872253 0.31135105330887997 0.010844766538476242 0.021169187361402268 1.621427083231557e-08 7.790102577094132 -0.1340527137897456 KTEVVMNSQQT(ph)PVGTPK ddPTM_A549_PD325901_60min_R1 3 KTEVVMNSQQTPVGTPK 17 1 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 KTEVVMNS(0.012)QQT(0.988)PVGTPK;KTEVVMNSQQT(1)PVGTPK;KTEVVMNSQQT(1)PVGTPK 132.13 2.4071e-12 33829600.0 4992.200000000001 5125.8 4648.2 4953.6 5253.8 5546.900000000001 5198.700000000001 6018.8 5544.299999999999 5714.299999999999 5621.799999999999 True False 5499.004468936603 5557.769154996665 4963.654803897265 5259.572621558149 4884.791212626055 5501.727885468836 5396.539373337799 5898.75031234274 5311.292351822607 5353.498122791459 4930.354239526407 1.1153365867408382 1.1272555449343384 1.0067541930565331 1.066773778523339 0.9907586707390973 1.1158889641968837 1.0945540849933275 1.1964151105112792 1.0772638422696361 1.0858242354824585 1.0 12.26747559074765 -10.271127572844598 1.028985830789832 1.0066291271785823 1.0856215329803143 0.01511923437878071 0.058695439595453244 0.5138681922413332 1.0731857705912997 0.023483446898683005 0.010251036178597784 5.356392917896561e-11 10.271127572844598 0.07899240580173195 KTEVVMNSQQTPVGT(ph)PK ddPTM_A549_MK2206_60min_R1 6 KTEVVMNSQQTPVGTPK 17 1 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 KTEVVMNSQQT(0.002)PVGT(0.998)PK;KTEVVMNSQQT(0.004)PVGT(0.996)PK;KTEVVMNSQQT(0.001)PVGT(0.999)PK;KTEVVMNSQQT(0.07)PVGT(0.929)PK;KTEVVMNSQQTPVGT(1)PK;KTEVVMNSQQTPVGT(1)PK 130.71 2.8133e-12 54339300.0 9549.82 9537.09 10375.56 8928.439999999999 14674.380000000001 10680.66 11876.239999999998 11254.98 16964.9 15660.920000000002 16031.5 True False 11161.596145317437 10022.487144795039 11846.970424126454 11115.908200812897 12515.798141033647 11810.880351951691 14033.999079459436 12850.40788193066 13122.377237378425 12123.10729501869 12050.4361031088 0.9262400173582052 0.8317115711861593 0.9831154924816493 0.9224486239087388 1.038617858635406 0.9801205741346318 1.1646050781381192 1.0663852969284224 1.0889545511131404 1.0060305860541547 1.0 13.556797737822743 -6.598817122297041 1.1874448324456737 1.052068472314927 0.8908639100127265 0.5594922606580823 0.05709159263152985 0.2819659673140757 0.761309391920055 0.009053844906327642 0.03060856277264092 2.518737323290171e-07 6.598817122297041 -0.16120456230220048 KTEVVMNSQQTPVGT(ph)PK ddPTM_A549_PD325901_60min_R1 4 KTEVVMNSQQTPVGTPK 17 1 O75781-2;O75781 O75781-2 PALM Paralemmin-1 1 KTEVVMNSQQTPVGT(1)PK;KTEVVMNSQQT(0.118)PVGT(0.882)PK;KTEVVMNS(0.002)QQT(0.099)PVGT(0.899)PK;KTEVVMNSQQT(0.076)PVGT(0.924)PK 115.66 4.7114e-10 75921000.0 5769.92 5354.28 6065.84 5694.47 6453.35 6028.490000000001 6281.6 6414.33 6956.39 7439.500000000001 7164.16 True False 6355.678030809396 5805.503966447293 6477.5043792591105 6046.204478820295 6000.088958848898 5979.395976179493 6520.649725423416 6286.391156205456 6664.037119797859 6969.76870036699 6283.013737352004 1.011565197291454 0.9239998843125308 1.0309549923074137 0.962309606753858 0.9549698933775775 0.9516764129660377 1.03782197493198 1.0005375475837932 1.0606434106901124 1.1093034317165795 1.0 12.617241019097202 -7.76755159177178 24.999630000766444 1.0274363094116437 0.9717573778471965 0.4063140210841717 0.03992404230680508 113.89777458864074 465854.9232701686 0.005170578788699088 0.007242151603182549 1.7078448255310255e-08 7.76755159177178 -0.05567893156444714 KTFEINPR ddPTM_A549_PD325901_60min_R1 1 KTFEINPR 8 1 P14625;H0YIV0;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 45.161 0.052898 1598700.0 1983.6 2105.1 2046.7 1749.8 3045.8 2627.3 2089.6 2114.4 2706.7 2527.5 2317.3 False True 2184.9736117508605 2282.504164849091 2185.6013698069214 1857.8811719158696 2831.8735154395754 2605.904139878538 2169.120871472994 2072.226633285288 2592.9468118027985 2367.9132186541506 2032.2867905750009 1.0751305484461962 1.123121094638073 1.0754394409012238 0.9141825752802407 1.3934418747259314 1.2822521663594741 1.0673301039659262 1.0196526606852503 1.2758764283800559 1.1651471778666582 1.0 10.9888882901901 KTFLDKDAQRLS(ph)PIPEEVPK ddPTM_A549_MK2206_60min_R1 2 KTFLDKDAQRLSPIPEEVPK 20 3 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KT(0.004)FLDKDAQRLS(0.996)PIPEEVPK;KT(0.023)FLDKDAQRLS(0.977)PIPEEVPK 68.895 0.00019665 14829500.0 2392.5 2636.5 2857.4 1746.01 3679.6000000000004 2484.4 2523.1 2412.8 3743.0 3450.1000000000004 3668.6000000000004 True False 2796.2955089909547 2770.6865885980005 3262.622286401788 2173.7825283813672 3138.3357143366447 2747.2975589887496 2981.514610464601 2754.8217888901004 2895.2164763427713 2670.7200138014864 2757.585371790845 1.0140376931195318 1.0047509741461413 1.1831446162201533 0.7882920146800962 1.1380738186533572 0.9962692677052409 1.0812048254115632 0.9989978250795007 1.0499100067616567 0.968499485499901 1.0 11.429189835411739 KTGS(ph)PEIK ddPTM_A549_MK2206_60min_R1 3 KTGSPEIK 8 1 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;E9PKA2 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 KT(0.165)GS(0.835)PEIK;KT(0.058)GS(0.942)PEIK;KT(0.011)GS(0.989)PEIK 77.279 0.0018807000000000001 334019200.0 20758.5 20987.9 20159.2 18471.100000000002 28015.7 21270.1 20077.7 19533.199999999997 29716.9 29144.1 29383.1 True False 24262.027303401766 22056.094463431047 23018.077691618593 22996.520329199182 23894.627642173367 23520.887864050303 23725.55820004167 22302.090917916146 22986.069598137972 22560.4275685435 22086.465337694914 1.0985020433303028 0.9986249101520092 1.0421802375201115 1.0412041934999476 1.0818674367687287 1.0649457712867827 1.0742125476976763 1.0097627925937622 1.0407310199567201 1.0214593971285968 1.0 14.430874931433776 -10.108573429359275 0.49442218721264014 0.9966851409781091 1.0527508087182509 0.24281604598890683 0.02806544627817167 1.0122775004858995 0.4514052744944304 0.025526265015236776 0.007350304384301881 7.788011257921815e-11 10.108573429359275 0.05606566774014177 KTGS(ph)PEIK ddPTM_A549_PD325901_60min_R1 4 KTGSPEIK 8 1 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;E9PKA2 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 KT(0.035)GS(0.965)PEIK;KT(0.03)GS(0.97)PEIK;KT(0.081)GS(0.919)PEIK;KT(0.092)GS(0.908)PEIK 85.554 0.0012365 553839000.0 30829.5 30124.199999999997 31161.899999999998 29749.2 35474.1 34894.299999999996 32157.700000000004 33855.0 34387.4 34633.1 37581.4 True False 33959.288144521626 32662.872054889085 33276.73392572741 31586.74051866474 32982.52159500131 34610.13238996829 33381.47887086863 33179.73546626627 32942.21716340472 32446.360155478178 32959.126048122984 1.0303455284262795 0.9910114730347721 1.0096364168497882 0.9583609854383138 1.0007098351711197 1.050092540058092 1.0128144424135817 1.006693424389384 0.9994869741177731 0.9844423698645369 1.0 15.008390367739414 -5.246498435755772 23.207473797262853 1.0018286023678324 1.0303455839516944 0.13586417243688453 0.02100547287917576 1645.9630710238596 2556526.8533095443 0.0027307397163923875 0.08493741561843511 5.66893613360014e-06 5.246498435755772 0.028516981583861956 KTGS(ph)PGSPGAGGVQSTAK ddPTM_A549_PD325901_60min_R1 1 KTGSPGSPGAGGVQSTAK 18 1 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 KT(0.25)GS(0.717)PGS(0.032)PGAGGVQSTAK 168.17 1.4802999999999999e-30 41312000.0 2611.2 2647.0 2405.2 2567.8 2704.7 2611.1 2831.9 3025.4 2860.6 2997.7 3706.4 True False 2876.287101736159 2870.0719796473095 2568.4313356425487 2726.4071741030784 2514.7312027084554 2589.836067307447 2939.6695041751427 2965.0560236196125 2740.3789300044655 2808.4247104093183 3250.536296805416 0.8848654003842183 0.8829533706385553 0.7901561776642115 0.838756108271289 0.7736357859408922 0.7967411623284144 0.904364460432025 0.9121744084302735 0.8430544008069295 0.8639881096449841 1.0 11.666462048622185 -11.196047592042563 0.3918602261908443 1.079634727974954 0.835126090168438 0.08602987100204762 0.05938435785478831 1.6860845383251517 0.25162322829181116 0.17797985083475287 0.01386929069304625 6.367257416675642e-12 11.196047592042563 -0.2445086378065161 KTGS(ph)YGALAEITASK ddPTM_A549_MK2206_60min_R1 3 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KT(0.004)GS(0.996)YGALAEITASK;KT(0.287)GS(0.713)YGALAEITASK;KT(0.002)GS(0.998)YGALAEITASK 183.74 2.3285e-33 593611000.0 16114.099999999999 16141.9 16377.7 14193.1 20834.399999999998 16134.9 17027.1 16305.8 21777.2 22718.7 23044.6 True False 18833.766128079882 16963.453762370584 18700.304129629232 17670.41013715247 17769.687359162792 17842.284408520198 20120.70366764765 18617.197084418185 16844.698971042428 17586.529891177586 17321.989821395444 1.0872749795070975 0.9793016816935194 1.0795702065666468 1.0201143355555302 1.0258456183373557 1.0300366523990279 1.1615699971602191 1.0747724295174768 0.9724459571172658 1.015271921558076 1.0 14.080317045212846 -8.76371943109029 24.974476015151055 0.9869883659461056 1.0557298749781319 0.2575334314552906 0.04569851804844604 51.204328463395875 560862.4310398976 0.007809321998122018 0.008512012827281333 1.7229813196623875e-09 8.76371943109029 0.06874150903202625 KTGS(ph)YGALAEITASK ddPTM_A549_PD325901_60min_R1 3 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KT(0.013)GS(0.987)YGALAEITASK;KT(0.001)GS(0.96)YGALAEIT(0.039)ASK;KT(0.149)GS(0.851)YGALAEITASK 218.64 4.2933e-46 912516000.0 42160.5 40538.4 43507.2 42781.6 49183.0 43888.7 43778.7 47732.1 46998.5 49294.0 50436.0 True False 46440.60292308028 43954.713237527154 46459.86022204703 45424.12226793689 45728.55575213888 43531.28497845208 45444.72238512383 46780.04582039191 45023.31648668631 46181.56842743335 44232.69174014623 1.0499158223493354 0.9937155417931128 1.0503511858374965 1.0269355194296101 1.033818064267497 0.9841427972366072 1.0274012409667022 1.0575898499510412 1.0178742173590694 1.0440596448151107 1.0 15.432825418349406 -9.782614436563646 1.112566323816996 1.003077226195899 1.026183573291595 0.0 0.024828245815926017 0.5494064031000877 1.3886974277942585 0.00622997500570365 0.003991168679315661 1.649626267647895e-10 9.782614436563646 0.023106347095696034 KTGSPGS(ph)PGAGGVQSTAK ddPTM_A549_MK2206_60min_R1 2 KTGSPGSPGAGGVQSTAK 18 1 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 KT(0.025)GS(0.025)PGS(0.951)PGAGGVQSTAK;KT(0.041)GS(0.031)PGS(0.927)PGAGGVQSTAK 107.47 1.7252999999999998e-09 7734700.0 2009.9699999999998 1934.13 1621.58 1731.63 2378.45 1849.21 1798.27 1872.44 2614.8 2565.33 2370.81 True False 2349.2037969515336 2032.568955662831 1851.5444275157188 2155.879427735826 2028.583155713664 2044.892174793746 2124.992381816091 2137.864104107003 2022.551974977577 1985.8201713009369 1782.072445972703 1.3182425901149462 1.1405647173638893 1.0389838144347134 1.2097597000660034 1.1383281079835161 1.1474798229527583 1.1924276067554667 1.1996505018291215 1.1349437445982247 1.1143318981159729 1.0 10.799340272094911 -10.203628331065604 0.6515223928222085 0.9975315762169086 1.1682112727291623 0.21476232506613802 0.0720276934138358 0.5019130778776902 0.3974218423026084 0.043414797476984485 0.0138555905789165 6.257079441596944e-11 10.203628331065604 0.17067969651225368 KTHIQDNHDGTYTVAYVPDVTGR ddPTM_A549_MK2206_60min_R1 2 KTHIQDNHDGTYTVAYVPDVTGR 23 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 106.69 4.8564999999999996e-11 25604000.0 1890.33 2321.5 2471.3 2158.25 2654.6000000000004 2398.84 2461.45 1554.46 3072.7 3049.0 3788.1 False True 2209.3714898687 2439.6544340717833 2821.767500659598 2687.021346887524 2264.111856527355 2652.6836565788817 2908.6636034751255 1774.8094653340945 2376.7383560936237 2360.228782377533 2847.410223758628 0.775923142873419 0.8567976660740508 0.990994369941827 0.9436720162297556 0.7951477583509868 0.9316127456609662 1.021511961713631 0.6233065578416436 0.8347017708450489 0.8289036692654677 1.0 11.47543464045675 -10.77305755241629 1.140966792537128 0.9965859583924632 0.8662084860785171 0.0 0.11677893227591657 0.6584368300918607 1.5816276706332528 0.06377358391710036 0.01796377560803273 1.6863295393104393e-11 10.77305755241629 -0.13037747231394614 KTHIQDNHDGTYTVAYVPDVTGR ddPTM_A549_PD325901_60min_R1 2 KTHIQDNHDGTYTVAYVPDVTGR 23 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 124.86 1.3039e-16 19331300.0 2046.3000000000002 1940.2399999999998 1980.28 2103.69 2845.0 2732.1 2084.43 2323.7 2333.99 2500.12 2633.7 False True 2254.0388695935594 2103.750834072872 2114.6737091910136 2233.630153473365 2645.1770147171787 2709.850683424869 2163.7541242938632 2277.351980592616 2235.9005169688608 2342.2619965268505 2309.7715963998535 0.9758708926487959 0.9108047035264881 0.9155336884768472 0.9670350769551558 1.145211508722381 1.173211536434426 0.9367827224416554 0.985964146473284 0.9680180154842442 1.0140664991194968 1.0 11.173534481310789 -6.525664250209812 24.97890840926039 1.0065933114203514 0.9333334264423143 0.2287839342584449 0.07166646363901073 122.05969355869279 1094566.067762313 0.011134451980061886 0.02327942057551858 2.9808199883456026e-07 6.525664250209812 -0.07325988497803704 KTHSEEFT(ph)NSLK ddPTM_A549_PD325901_60min_R1 1 KTHSEEFTNSLK 12 1 Q9H788-2;Q9H788;H0YAT1 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 KTHSEEFT(0.615)NS(0.385)LK 65.172 0.0023005 10472000.0 3520.7 3037.8 3178.8 3423.4 3355.4 3616.2 2926.8 3125.7 3694.4 3576.2 3976.7 True False 3878.1188721976473 3293.8060671600265 3394.532483677256 3634.8556428944944 3119.728279501591 3586.750866147288 3038.180975606412 3063.3554614357845 3539.137215622068 3350.3981216818884 3487.5911103782882 1.1119763611787048 0.9444358478143837 0.9733172198930916 1.0422252861231296 0.894522373972677 1.0284321620943242 0.8711402453588861 0.8783585473422978 1.014779859109742 0.9606625363024511 1.0 11.768015191288207 -4.009536502165826 15.694690227015625 0.9872307835383334 0.9840364026184989 0.0 0.07252667478910084 0.0 0.0 0.009036119179717441 0.0 9.78280727476759e-05 4.009536502165826 -0.003194380919834483 KTHSEEFT(ph)NSLKTK ddPTM_A549_PD325901_60min_R1 1 KTHSEEFTNSLKTK 14 2 Q9H788-2;Q9H788;H0YAT1 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 KT(0.008)HS(0.008)EEFT(0.532)NS(0.449)LKT(0.002)K 42.647 0.027385000000000003 4279400.0 1396.6 1008.7 1634.0 1412.6 1272.0 1371.3 1073.5 1521.5 1545.0 1547.2 1418.8 True False 1538.381803877419 1093.7066890329572 1744.893066040215 1499.8530937526332 1182.6591081617757 1360.132587453065 1114.35262994174 1491.15248890634 1480.069022882226 1449.509527953197 1244.2965945142246 1.2363465516660084 0.8789758758923085 1.402312819735253 1.2053823022301031 0.950463991765153 1.0930935545829916 0.8955683354391764 1.198389914012815 1.1894824991143267 1.1649228442348087 1.0 10.281114696524101 -11.055542010742405 1.3846283403329147 1.0004665202899452 1.120402085551554 0.0 0.15804022804009984 0.9312624600219791 3.2052382284177967 0.10237392117595714 0.02315988874781662 8.799499870960083e-12 11.055542010742405 0.11993556526160876 KTHSEEFTNS(ph)LK ddPTM_A549_MK2206_60min_R1 4 KTHSEEFTNSLK 12 1 Q9H788-2;Q9H788;H0YAT1 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 KTHSEEFT(0.125)NS(0.875)LK;KTHSEEFT(0.002)NS(0.998)LK;KTHSEEFT(0.13)NS(0.869)LK;KTHSEEFT(0.003)NS(0.997)LK 113.29 1.5261e-05 26707500.0 6079.1 6856.200000000001 6477.6 5628.1 8560.9 7639.5 6214.4 6458.9 10887.0 9482.4 10050.3 True False 7105.103460274564 7205.151294802051 7396.221082941215 7006.984752655014 7301.602950555655 8447.90681931032 7343.476039503472 7374.46885455167 8421.111882966537 7340.319254187187 7554.533135830981 0.9405086101979244 0.9537520274586102 0.9790440984183528 0.9275205531128115 0.966519415465175 1.1182566370967502 0.9720621919935104 0.9761647373779764 1.114709768499842 0.971644325626453 1.0 12.883126885395251 -7.084686353862324 8.74400285862804 1.0460511261825365 0.9518335505804806 0.2863327903085495 0.05170612981165731 0.28241802982839914 27.18184266521415 0.00814612190002992 0.014139446782231425 8.22836685536768e-08 7.084686353862324 -0.0942175756020559 KTHSEEFTNS(ph)LK ddPTM_A549_PD325901_60min_R1 3 KTHSEEFTNSLK 12 1 Q9H788-2;Q9H788;H0YAT1 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 KTHSEEFT(0.001)NS(0.999)LK;KTHSEEFT(0.006)NS(0.994)LK;KTHSEEFT(0.331)NS(0.669)LK 121.27 5.5384e-06 22702400.0 6100.1 6679.6 6929.4 7071.099999999999 8441.4 6719.4 5901.0 6851.3 8118.5 7689.700000000001 8994.9 True False 6719.377661343729 7242.513334058236 7399.670753867243 7507.8657873667225 7848.50518524907 6664.679434209967 6125.565784151102 6714.645446759123 7777.307677844246 7204.17102966759 7888.584323369047 0.8517849826918027 0.918100515526354 0.9380226477324388 0.9517380406425411 0.9949193497239743 0.8448511369101553 0.7765101484692 0.8511851013454643 0.9858939651319749 0.9132400357724568 1.0 12.945550703670591 -8.825657967652099 8.073118586702154 0.9935768991313745 0.8935789286911414 0.19346869114441456 0.06208022374424229 0.21071247157410844 23.47593258517474 0.010916576196245115 0.01161174673698127 1.493970535706119e-09 8.825657967652099 -0.09999797044023306 KTHSEEFTNS(ph)LKTK ddPTM_A549_PD325901_60min_R1 1 KTHSEEFTNSLKTK 14 2 Q9H788-2;Q9H788;H0YAT1 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 KTHSEEFT(0.283)NS(0.714)LKT(0.003)K 65.71600000000001 0.00093503 3157800.0 1161.8 1262.2 1669.6 1362.7 1376.5 1435.9 1404.5 1724.7 1580.9 1651.3 1866.5 True False 1279.7450807280434 1368.570023691286 1782.9090961204058 1446.8708840837542 1279.8193886672045 1424.206506471128 1457.9490160718892 1690.2995054990233 1514.4602707278405 1547.0366361873791 1636.9323327183545 0.781794735890425 0.8360577870794357 1.0891770297918404 0.883891688840322 0.7818401305213918 0.8700460477227147 0.890659306393418 1.0326019418848214 0.925181964127294 0.9450828267398866 1.0 10.676778969779345 -8.10702881847882 7.61200092451236 0.9687134362162905 0.8783379948845682 0.25733915086036974 0.08118148991268126 0.3381466028011176 21.539644219210395 0.013440315595961538 0.017383512683140513 7.815759398331217e-09 8.10702881847882 -0.09037544133172226 KTIDRQS(ph)AR ddPTM_A549_PD325901_60min_R1 1 KTIDRQSAR 9 2 A0A1B0GTX1;A0A1C7CYY6;Q6XZF7-2;Q6XZF7 A0A1B0GTX1;Q6XZF7 DNMBP Dynamin-binding protein 1 KT(0.001)IDRQS(0.999)AR 43.544 0.021873 13387000.0 1500.0 1729.1 1809.9 1555.2 2390.7 1981.6 1856.9 2124.0 1992.4 1479.6 1931.4 True False 1652.278895758363 1874.8173252769775 1932.7306978128436 1651.2611718845349 2222.7854794672617 1965.4625065973853 1927.5653456346693 2081.6351537542328 1908.6663567576375 1386.1778034898834 1693.8500441533506 0.9754575981867589 1.1068378406626196 1.1410282182204001 0.9748567634922469 1.3122681592385546 1.1603521299784225 1.1379787439201197 1.2289370956652255 1.1268213283376334 0.818359221511103 1.0 10.726090443787747 -10.399615639129552 0.9342840370783018 1.0058994141251736 1.1323014419019855 0.3108305694992187 0.10866258741747338 0.6166909375394395 1.0286223826441012 0.04655905626359284 0.016727090324151216 3.9845966075706446e-11 10.399615639129552 0.12640202777681186 KTKDDEGAT(ph)PIK ddPTM_A549_MK2206_60min_R1 2 KTKDDEGATPIK 12 2 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 KTKDDEGAT(1)PIK;KTKDDEGAT(1)PIK 92.06299999999999 9.261299999999999e-05 10969700.0 3704.8999999999996 3432.9 3787.0 3323.5 3736.2 3430.8 4012.8999999999996 2995.1 4955.5 4533.8 4594.3 True False 4330.19654389157 3607.619946898568 4324.053544692229 4137.757649197586 3186.609929314214 3793.8449788192725 4741.991986181046 3419.6645971090607 3833.0871623074 3509.6114311391493 3453.4085137705633 1.2538906204188673 1.0446548482500932 1.2521117983725192 1.1981662849032084 0.9227434045545198 1.098579841826187 1.373133808894088 0.9902288082840626 1.1099431610893578 1.0162746217670093 1.0 11.753805289554501 -14.999999997249475 0.1290747399911449 0.5180780516314603 1.197147902223801 0.17028945657406613 0.12046212858716962 98.06215005112963 0.8675599006851978 12.096357225774815 0.3574685281941312 1.0000000063333182e-15 14.999999997249475 0.6790698505923407 KTKDDEGAT(ph)PIK ddPTM_A549_PD325901_60min_R1 2 KTKDDEGATPIK 12 2 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 KTKDDEGAT(1)PIK;KTKDDEGAT(1)PIK 79.771 0.00030228 13879900.0 3602.8 3029.3 3390.8 3575.7 4530.0 4808.3 4323.4 4263.7 4394.3 4010.1000000000004 5048.7 True False 3968.553603758821 3284.5897423292768 3620.9200785368207 3796.562867996097 4211.828427651611 4769.142798986787 4487.929352855256 4178.657158692058 4209.622852589885 3756.9016016320547 4427.741906346182 0.8962928932399566 0.7418205062091693 0.8177802941375237 0.8574489995802532 0.9512362095032894 1.077104966789343 1.0135932599013526 0.9437445196846013 0.95073808312005 0.8484915519234246 1.0 12.112355414350112 -6.7141614693137655 2.8937621921622165 0.9837399362369105 0.8139494825273265 0.5413040326165646 0.06263064365303946 0.10547272966895116 1.799110814061602 0.007073541953191862 0.015470179777576434 1.9312501508258535e-07 6.7141614693137655 -0.169790453709584 KTKDDEGAT(ph)PIKR ddPTM_A549_MK2206_60min_R1 1 KTKDDEGATPIKR 13 3 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 KTKDDEGAT(1)PIKR 43.408 0.032136 9494100.0 1838.2 1953.7 1690.5 1950.6 2677.4 2259.9 2129.5 1834.4 2935.2 2866.9 2924.1 True False 2148.4432203248352 2053.1349850726015 1930.2383198579912 2428.497087565761 2283.558006730334 2499.041117999788 2516.4025853055227 2094.4318176143906 2270.3818865512408 2219.265298851476 2197.96526894554 0.9774691396081692 0.9341071099169733 0.8781932759037684 1.1048841953407285 1.0389418063124611 1.1369793478123007 1.1448782293601714 0.9528957746539739 1.032947116421199 1.0096907945757279 1.0 11.101952874445178 -6.255792676738898 24.99044843929051 1.0357585949560724 0.9303415697116019 0.42884061565093756 0.060848705697971364 398.9434643419882 1765584.4350852822 0.008932838610634784 0.022944899968773958 5.548905430831651e-07 6.255792676738898 -0.1054170252444705 KTKDDEGAT(ph)PIKR ddPTM_A549_PD325901_60min_R1 2 KTKDDEGATPIKR 13 3 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 KTKDDEGAT(1)PIKR;KTKDDEGAT(1)PIKR 53.328 0.0098606 30467000.0 3638.8 3840.1 3782.8 3558.0 5108.9 4557.1 3325.6 3964.6 4641.7 3916.6000000000004 3761.5 True False 4008.208297257023 4163.71870383212 4039.5235558243103 3777.769579195714 4750.068488748191 4519.988488501687 3452.157527838147 3885.5229428314656 4446.62549094656 3669.305207588863 3298.859346113091 1.2150285528177274 1.2621692127425974 1.2245213063066522 1.1451744930098045 1.4399124031598982 1.3701670833063562 1.0464700569624712 1.1778383177838776 1.3479281849909224 1.1122951367757625 1.0 11.687751551503688 -10.934978849636812 1.1139200352380343 0.995613133269921 1.2545824548963238 0.29779573854645947 0.1089749844711301 0.4035896584111404 0.8645055812614818 0.08328125442881794 0.0182220470247 1.1615051783586734e-11 10.934978849636812 0.25896932162640285 KTKFAS(ph)DDEHDEHDENGATGPVK ddPTM_A549_PD325901_60min_R1 1 KTKFASDDEHDEHDENGATGPVK 23 2 P05455 P05455 SSB Lupus La protein 1 KT(0.023)KFAS(0.977)DDEHDEHDENGATGPVK 125.74 1.1247e-16 14414000.0 871.17 635.8 711.25 1031.1 1269.9 1849.1 1305.0 1025.8 1850.2 802.97 1143.9 True False 959.6105370785415 689.3810973402936 759.5197020936979 1094.7887052019953 1180.7066049171701 1834.0415426671511 1354.6624891234005 1005.3396142754676 1772.442528243815 752.2703371642826 1003.2075517795472 0.9565423778721852 0.6871769417180222 0.7570912925709323 1.0912883413407288 1.17693153607423 1.8281775684541277 1.350331231777933 1.0021252456604204 1.7667755043308384 0.7498651060090828 1.0 9.970404398036184 -6.5947251482292275 2.214991862412801 1.3695140232942073 0.7921706910241992 0.26657988982995406 0.31495866495842423 0.2501416537412596 2.4651172572351303 0.047090000107849896 0.11638869299666571 2.54258131887162e-07 6.5947251482292275 -0.5773433322700081 KTKPPRPDS(ph)PATTPNISVK ddPTM_A549_MK2206_60min_R1 4 KTKPPRPDSPATTPNISVK 19 3 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 KT(0.011)KPPRPDS(0.975)PAT(0.011)T(0.003)PNISVK;KT(0.092)KPPRPDS(0.908)PATTPNISVK;KT(0.006)KPPRPDS(0.919)PAT(0.037)T(0.037)PNISVK;KT(0.011)KPPRPDS(0.989)PATTPNISVK 167.57 1.7036999999999998e-34 90811000.0 10860.0 12440.599999999999 11782.6 10621.7 15406.800000000001 12682.8 11588.0 11519.5 17714.5 16989.6 17627.9 True False 12692.902498491845 13073.77340190112 13453.549853628378 13224.016976826226 13140.480129264544 14024.88547783872 13693.389602498431 13152.424401989188 13702.194034243661 13151.637560210345 13250.405924710203 0.9579255587046817 0.9866696519478179 1.015331147594455 0.9980084423047927 0.9917039677070827 1.0584494963798972 1.0334317061911382 0.9926053946363792 1.0340961712494359 0.9925460121704145 1.0 13.69374893670423 -4.543894677411233 0.7715068446446608 1.017257466194843 0.8221658579660264 0.3908695319045814 0.020685290049442438 4.808667484002393 0.93080897973638 0.003266986696076003 1.0521838321227674 2.8582836337635412e-05 4.543894677411233 -0.19509160822881666 KTKPPRPDS(ph)PATTPNISVK ddPTM_A549_PD325901_60min_R1 4 KTKPPRPDSPATTPNISVK 19 3 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 KT(0.001)KPPRPDS(0.833)PAT(0.153)T(0.014)PNISVK;KTKPPRPDS(0.999)PATTPNISVK;KT(0.01)KPPRPDS(0.881)PAT(0.072)T(0.037)PNISVK;KT(0.007)KPPRPDS(0.951)PAT(0.041)T(0.001)PNISVK 160.33 3.5393e-27 134538000.0 14942.899999999998 13644.4 14221.599999999999 15791.3 17595.4 15829.1 14461.0 17451.8 18030.0 16353.0 18957.7 True False 16459.892207618424 14794.261473025972 15186.7632974281 16766.69273635561 16359.559804834691 15700.193057721386 15011.321268362828 17103.71015832775 17272.261801013945 15320.468789179562 16626.0230827617 0.9900077803142517 0.889825630542102 0.9134333100483986 1.0084608118786842 0.9839731199336968 0.944314402762965 0.902881055417694 1.0287312890874865 1.0388691098908842 0.9214752507509885 1.0 14.02115549917158 -8.280484821029395 24.777007010453946 1.0196459486951939 0.9476421380057615 0.15256071959962536 0.046531362205693455 495.71128219710096 644890.0406321953 0.006208309255337003 0.007511414074864853 5.242219227013087e-09 8.280484821029395 -0.0720038106894324 KTLEAEFNSPSPPT(ph)PEPGEGPR ddPTM_A549_PD325901_60min_R1 1 KTLEAEFNSPSPPTPEPGEGPR 22 1 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 KTLEAEFNS(0.002)PS(0.006)PPT(0.992)PEPGEGPR 53.262 0.004989899999999999 5682000.0 1184.1 1235.9 1289.8 1822.0 1645.2 1439.4 1260.5 1173.9 1288.2 1444.2 1665.9 True False 1304.308960311651 1340.0536303914273 1377.3335841974726 1934.5408019377724 1529.646827631883 1427.6780036315497 1308.4690172720661 1150.4856435932656 1234.0614338361713 1353.012965531286 1461.0048610101821 0.8927478580802346 0.9172136699564944 0.9427303227760264 1.3241166087566425 1.0469827092664428 0.9771890852193406 0.8955952524123375 0.7874618861964536 0.8446662066428066 0.9260838219222437 1.0 10.512745262901799 -7.555293127734547 3.9059326292505245 0.9102684454573396 1.0299054847282187 0.21864336779858673 0.11831202527879016 0.3279186969889071 10.923984626057102 0.020222868178416117 0.031142971556007093 2.7842413063025536e-08 7.555293127734547 0.1196370392708791 KTLLSESSSQSS(ph)KSPSLSSK ddPTM_A549_PD325901_60min_R1 1 KTLLSESSSQSSKSPSLSSK 20 2 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 KTLLSESSSQS(0.012)S(0.617)KS(0.362)PS(0.008)LSSK 95.71 3.6873000000000005e-07 11932000.0 2549.4 2348.7 2460.2 2799.0 2960.8 3242.3 2572.4 2702.2 3097.9 3221.3 2896.5 True False 2808.213211230913 2546.6331917633674 2627.1639663844185 2971.887873009783 2752.8436222054934 3215.89578378114 2670.294089671293 2648.3025011651084 2967.7060362374446 3017.9065682495034 2540.2488624263124 1.1054874397418901 1.0025132692436114 1.034215192552075 1.1699199700344287 1.0836905245481034 1.2659766652584916 1.0511938925231004 1.0425366350270062 1.168273738897711 1.1880357916456097 1.0 11.310754126148082 -3.375512644148735 17.635828861164413 1.0874349149431486 1.0772351033725451 0.0 0.08349984389646431 0.0 0.0 0.011188015594502968 0.0 0.0004211990236909791 3.375512644148735 -0.010199811570603456 KTLLSESSSQSSKS(ph)PSLSSK ddPTM_A549_MK2206_60min_R1 1 KTLLSESSSQSSKSPSLSSK 20 2 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 KTLLSESSS(0.002)QS(0.094)S(0.071)KS(0.828)PS(0.005)LSSK 112.13 4.6315000000000004e-11 6810600.0 2020.3 2007.3 2729.5 2289.3 3076.6 2179.6 1996.7 2764.5 3532.5 3213.7 3838.1 True False 2361.277248407283 2109.4629961284923 3116.5841431839017 2850.178602770584 2624.0362155473767 2410.243825298614 2359.474544296567 3156.3763409261796 2732.394390243344 2487.7229379884147 2884.993843828829 0.818468730343461 0.731184574497709 1.080274105211856 0.9879322997056936 0.9095465562813397 0.8354415835078008 0.8178438748989434 1.094066924155784 0.9471057957673275 0.8622974857675346 1.0 11.494352525027786 -5.747518275606367 24.99988047403855 0.9644675295237312 0.7748265775223205 0.34822199115883634 0.08930656759138354 165.25203441174907 296758.658550572 0.011491720446866149 0.04405316717925255 1.78847026665871e-06 5.747518275606367 -0.18964095200141062 KTLLSESSSQSSKS(ph)PSLSSK ddPTM_A549_PD325901_60min_R1 1 KTLLSESSSQSSKSPSLSSK 20 2 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 KTLLSESSS(0.001)QS(0.021)S(0.195)KS(0.756)PS(0.027)LS(0.001)SK 132.35 1.5275e-17 12836000.0 2851.7 2665.1 2551.1 2565.7 3129.5 3387.3 3002.7 3110.2 3403.0 3019.8 3090.8 True False 3141.2024846894155 2889.6973301692638 2724.2329870105214 2724.1774618725244 2909.6947161888997 3359.7149518557358 3116.969391640488 3048.164621095302 3259.983744251275 2829.129312637707 2710.651194195494 1.1588368475500983 1.0660528128285829 1.0050105276710302 1.0049900436123966 1.0734301493381484 1.2394493836204847 1.1498968950025998 1.1245137801656477 1.2026570409472472 1.043708360078168 1.0 11.404423764204317 -7.0129716168579606 24.84660745949977 1.1155339414501877 1.0533846316546145 0.15602360924186043 0.07303590017644015 1160.2043535288947 2222330.0697782584 0.013439891958134654 0.024012649046891918 9.705733966086324e-08 7.0129716168579606 -0.062149309795573204 KTLPLTTAPEAGEVTPS(ph)DSGGQEDSPAK ddPTM_A549_MK2206_60min_R1 1 KTLPLTTAPEAGEVTPSDSGGQEDSPAK 28 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KTLPLTTAPEAGEVT(0.059)PS(0.46)DS(0.379)GGQEDS(0.103)PAK 91.389 6.928900000000001e-10 2657400.0 452.26 499.89 536.81 0.0 777.37 670.44 503.44 707.96 745.14 661.27 878.65 True False 528.590431304597 525.332265797176 612.9377299514749 0.0 663.0199027758124 741.3855157979463 594.9085313670872 808.3154980365698 576.3669797440696 511.88864772803913 660.4569554936561 0.80034047171099 0.7954072728396332 0.9280509878093977 0.0 1.0038805667210222 1.122534193381006 0.9007529202602236 1.223873094700619 0.8726790973277981 0.7750522474934493 1.0 9.367320728355917 KTLS(ph)LVK ddPTM_A549_MK2206_60min_R1 1 KTLSLVK 7 1 F8VRW9;F8W0R1;F8VR88;F8VUZ2;F8VPA6;Q96RQ1 F8VRW9 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 1 KT(0.018)LS(0.982)LVK 64.297 0.010825 5680600.0 1549.9 1461.0 1715.9 1567.5 2043.0 1531.6 1874.7 1759.9 2606.7 2195.1 2377.2 True False 1811.4852285831057 1535.3586595644517 1959.240421794928 1951.537570367749 1742.477406345736 1693.6728954062014 2215.308723490146 2009.3712144677077 2016.2866120445367 1699.2253854368391 1786.875632617674 1.0137724167906303 0.8592420376314809 1.0964615477601813 1.0921507545037448 0.9751531525409538 0.9478403893868451 1.2397665976589771 1.124516545969173 1.1283866516724437 0.9509477629103755 1.0 10.803223510284026 KTLS(ph)LVK ddPTM_A549_PD325901_60min_R1 2 KTLSLVK 7 1 F8VRW9;F8W0R1;F8VR88;F8VUZ2;F8VPA6;Q96RQ1 F8VRW9 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 1 KT(0.002)LS(0.998)LVK;KT(0.009)LS(0.991)LVK 78.655 0.006974600000000001 21496000.0 7830.6 7541.5 7501.5 7608.6 8228.3 8028.6 7432.1 7676.7 8333.4 8354.0 8525.599999999999 True False 8625.556747416955 8177.048671896553 8010.596900184015 8078.565941615656 7650.372594093982 7963.217743473849 7714.93263250117 7523.582196245355 7983.176178179124 7826.527014297443 7477.0052482312285 1.1536111666442161 1.0936261779180814 1.0713643543421363 1.0804547640951212 1.0231867358798183 1.0650277054917996 1.0318212140249903 1.0062293587429465 1.0676970141311104 1.0467462245193553 1.0 12.868244830356035 -2.0000000000000533 0.34639550468829516 1.0271324426165325 2.3962450921940603 0.7314512584989732 0.02170941290492811 23.57172926949635 0.29046930367271556 0.00695394130528398 21.332390709623283 0.009999999999998774 2.0000000000000533 1.3691126495775279 KTLT(ph)PEPAPSLSR ddPTM_A549_MK2206_60min_R1 2 KTLTPEPAPSLSR 13 1 A0A0G2JLR5;A0A0G2JMW4;Q02833-3;Q02833-2;Q02833 A0A0G2JLR5 RASSF7 Ras association domain-containing protein 7 1 KT(0.012)LT(0.986)PEPAPS(0.001)LS(0.001)R;KT(0.112)LT(0.887)PEPAPSLSR 58.577 0.0069006 13086400.0 2932.2 3083.0 2831.2 3041.6 4092.8 3039.1 2973.1000000000004 3095.1000000000004 4550.1 3811.5 4423.9 True False 3427.0836745928004 3239.911531442303 3232.70673243534 3786.792136542614 3490.754541699378 3360.69554480869 3513.2737855702526 3533.839903346217 3519.509615016628 2950.479502798284 3325.323536571314 1.030601575125652 0.9743146781990789 0.9721480321787066 1.1387740455616275 1.0497488449796488 1.0106371629251594 1.0565208909544876 1.0627055877365548 1.0583961459117255 0.8872759207786665 1.0 11.699278998779484 KTNHS(ph)SPEAQSK ddPTM_A549_MK2206_60min_R1 2 KTNHSSPEAQSK 12 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;H7C0P6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 KT(0.018)NHS(0.491)S(0.491)PEAQSK;KT(0.095)NHS(0.453)S(0.453)PEAQSK 58.071000000000005 0.0028414 3417000.0 659.52 639.96 553.2 271.06 688.41 822.46 761.05 684.95 635.48 885.9 1219.08 True False 770.8308522841021 672.5312305098338 631.6520784060575 337.46971216834584 587.1458009312128 909.4921712952373 899.322933809236 782.0437600714002 491.5447946530335 685.7745747157286 916.3487911036316 0.841198089382242 0.7339249388869178 0.689314030354434 0.3682764853783506 0.6407448851698342 0.9925174563714584 0.9814198944117228 0.8534345957171209 0.5364167000875585 0.7483772351462328 1.0 9.839753027634783 -7.13081344285436 15.63346808509352 0.8121705976510987 0.6449507327931163 0.24080449512566093 0.1660343416285725 2.1204873583444446 253.2670612348539 0.03144488913174994 0.05446621970311228 7.399230508862054e-08 7.13081344285436 -0.16721986485798235 KTNHS(ph)SPEAQSK ddPTM_A549_PD325901_60min_R1 2 KTNHSSPEAQSK 12 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;H7C0P6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 KT(0.048)NHS(0.476)S(0.476)PEAQSK;KT(0.011)NHS(0.494)S(0.494)PEAQSK 56.482 0.0035838000000000003 3252200.0 822.54 755.6 684.15 594.74 869.91 1044.15 578.9000000000001 739.02 895.11 1048.96 1091.9 True False 906.0436552780557 819.2770637784306 730.5805331281597 631.4757390474591 808.8105226265807 1035.6467885868299 600.9303562862355 724.2796663500254 857.4916395288733 982.728486583367 957.6032221243887 0.9461576928156622 0.8555496105797459 0.7629261433638538 0.6594335988621319 0.8446196753936147 1.0814988553289389 0.6275358545192709 0.7563463129784086 0.8954560925834987 1.0262376565559579 1.0 9.903284196416056 -9.4347545648823 1.2387031689354535 0.9747432147876799 0.816906338549321 0.255872222046027 0.12190132695868451 0.4252605558143763 1.3519193137127323 0.030464041325383655 0.024118853912225686 3.6748992333230526e-10 9.4347545648823 -0.15783687623835885 KTPEKLDNT(ph)PASPPRSPAEPNDIPIAK ddPTM_A549_MK2206_60min_R1 1 KTPEKLDNTPASPPRSPAEPNDIPIAK 27 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KTPEKLDNT(0.541)PAS(0.453)PPRS(0.006)PAEPNDIPIAK 93.376 2.5769999999999997e-09 5330200.0 1815.3 1829.8 1976.0 1950.7 3388.4 2568.2 2767.7 2793.4 3417.5 3806.4 3832.4 True False 2121.6782601760815 1922.9290042922894 2256.2265128893173 2428.62158757025 2889.970848586338 2839.965219366811 3270.5552643109168 3189.373004428718 2643.4417066260803 2946.531596340388 2880.7093111408262 0.7365124457267258 0.6675192796633708 0.7832190857173994 0.8430637475908532 1.003215019790332 0.9858562293611363 1.1353298479865372 1.107148504048697 0.9176357004862866 1.0228493326088133 1.0 11.492208371909545 -6.430263867265841 1.8264215624793592 0.9896935629852271 0.708580300740384 0.7914753395533618 0.06618313901281996 0.14845653424951866 0.9593239421990968 0.011281336481720297 0.03366057466910305 3.7130956146153915e-07 6.430263867265841 -0.2811132622448431 KTPEKLDNTPAS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 KTPEKLDNTPASPPR 15 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KT(0.001)PEKLDNT(0.016)PAS(0.983)PPR;KTPEKLDNT(0.014)PAS(0.986)PPR 49.993 0.0079293 3156500.0 1042.85 1330.23 1127.44 1158.13 2139.7 1463.53 1800.76 1408.24 2125.52 1832.19 2188.3 True False 1218.8575847653974 1397.9330251282834 1287.3279451882252 1441.8719019904308 1824.9529644434508 1618.3997731874122 2127.9347825850073 1607.8623325541253 1644.0931137579712 1418.2970064887804 1644.884715992452 0.7409987903194734 0.8498668700224571 0.7826250269530333 0.8765793055110662 1.1094716527549189 0.9838986024080965 1.2936680375810434 0.9774924144662692 0.9995187491094152 0.8622470576201091 1.0 10.683770758899675 -6.578718562993869 4.9958942296048825 1.0255334116433583 0.8011286703454716 0.5202116017193121 0.10340495965839941 0.1104497719646448 5.760548167879623 0.01293319589516715 0.027716484963564644 2.638040368331053e-07 6.578718562993869 -0.22440474129788668 KTPEKLDNTPAS(ph)PPR ddPTM_A549_PD325901_60min_R1 4 KTPEKLDNTPASPPR 15 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KTPEKLDNT(0.007)PAS(0.993)PPR;KTPEKLDNT(0.006)PAS(0.994)PPR;KTPEKLDNT(0.164)PAS(0.836)PPR;KTPEKLDNT(0.029)PAS(0.971)PPR 66.325 0.00081348 66092900.0 7018.1 6623.2 6339.4 6466.9 8105.9 7139.2 7027.8 6374.2 5363.799999999999 5314.92 5740.0 True False 7730.572345547842 7181.36030812242 6769.629805909022 6866.345725604484 7536.5695478369 7081.060722194212 7295.246774759722 6247.061580536835 5138.378139116946 4979.335044150078 5034.016388857939 1.535666900620017 1.4265667318877455 1.3447770692389103 1.3639895453662285 1.4971285283293867 1.4066423656997038 1.4491901120756552 1.2409696548393832 1.0207313091967671 0.989137630773533 1.0 12.297494198039324 -8.568189704897165 2.4398343790064265 1.0074637346544424 1.427794176690655 0.9280350148644027 0.05230663080778275 0.04871670317323435 0.580202133256136 0.009231587047332988 0.01067023662332642 2.7027775014709237e-09 8.568189704897165 0.4203304420362126 KTPEKLDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_A549_MK2206_60min_R1 3 KTPEKLDNTPASPPRSPAEPNDIPIAK 27 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 2 KT(0.001)PEKLDNT(0.489)PAS(0.526)PPRS(0.984)PAEPNDIPIAK;KT(0.023)PEKLDNT(0.254)PAS(0.725)PPRS(0.998)PAEPNDIPIAK;KTPEKLDNT(0.02)PAS(0.981)PPRS(0.999)PAEPNDIPIAK 103.99 6.9937e-13 96920000.0 6772.46 7236.1 7542.1 6057.76 10007.6 7897.7 7418.5 7304.099999999999 11321.599999999999 9927.9 10065.8 True False 7915.485677250101 7604.386582117961 8611.683189707754 7541.911471943183 8535.495296987554 8733.429371931024 8766.345423380622 8339.478542868112 8757.275676880123 7685.180494773996 7566.184058052741 1.0461661541032161 1.0050491137635702 1.1381805046815219 0.9967919646253219 1.1281109779378375 1.1542713347867841 1.1586217512182433 1.1022040276686564 1.1574230298507864 1.0157274044364022 1.0 12.885350157059168 -5.745547757243473 24.865308716791418 1.0901359405663207 1.0256076180871254 0.1583286057690938 0.06063809316961112 392.79172884778563 614581.8258855194 0.009642347688811816 0.03710599520323299 1.7966035055960137e-06 5.745547757243473 -0.06452832247919527 KTPEKLDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_A549_PD325901_60min_R1 6 KTPEKLDNTPASPPRSPAEPNDIPIAK 27 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 2 KTPEKLDNT(0.017)PAS(0.984)PPRS(0.999)PAEPNDIPIAK;KTPEKLDNT(0.033)PAS(0.967)PPRS(0.999)PAEPNDIPIAK;KT(0.002)PEKLDNT(0.158)PAS(0.84)PPRS(1)PAEPNDIPIAK;KT(0.001)PEKLDNT(0.026)PAS(0.975)PPRS(0.998)PAEPNDIPIAK;KT(0.006)PEKLDNT(0.106)PAS(0.893)PPRS(0.994)PAEPNDIPIAK;KT(0.014)PEKLDNT(0.109)PAS(0.882)PPRS(0.995)PAEPNDIPIAK 120.43 4.9689999999999995e-18 100990900.0 10497.8 11215.5 11678.0 12984.1 12958.900000000001 14879.0 13498.0 16489.1 19726.3 21052.5 21846.899999999998 True False 11563.528927928102 12160.66954580067 12470.539305518745 13786.098367969382 12048.711569778015 14757.830357116733 14011.673776389007 16160.211965051287 18897.272211056094 19723.241557157875 19159.8697989095 0.603528575574467 0.6346947903838472 0.6508676434862055 0.7195298565522625 0.6288514325114973 0.7702469020930761 0.7313031833434741 0.8434405940467851 0.9862943960157624 1.0294037362550574 1.0 14.225800136808 -8.290030042808358 0.9685839255697333 1.0017070658056315 0.6508330342919904 0.9315107667014553 0.03985025684197886 0.07802542585562182 0.1437608909634237 0.0077725613165339 0.010184780576847678 5.128259074564289e-09 8.290030042808358 -0.35087403151364116 KTPEKLDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_A549_MK2206_60min_R1 2 KTPEKLDNTPASPPRSPAEPNDIPIAK 27 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KT(0.003)PEKLDNT(0.018)PAS(0.808)PPRS(0.17)PAEPNDIPIAK;KT(0.001)PEKLDNT(0.089)PAS(0.897)PPRS(0.013)PAEPNDIPIAK 92.609 1.1271e-09 36890000.0 2480.8 4104.0 3365.3999999999996 3156.3999999999996 5189.8 3695.8 3713.3 3987.7 5436.8 5362.2 5862.2 True False 2899.4983902632207 4312.876070398706 3842.6643251405376 3929.7181416961816 4426.387294886487 4086.8871029265088 4387.958544266261 4552.96868681907 4205.373480785565 4150.875295790362 4406.45395151074 0.6580117305592484 0.9787634496713734 0.8720536666048879 0.8918096466999024 1.0045236699611744 0.9274775472294069 0.9958026550491609 1.0332500320939695 0.9543668280803809 0.9419990181373042 1.0 12.105402413349928 -4.759493843045531 1.4408710923626362 0.972763078171043 1.624885560830558e-55 0.731213079149716 0.05120172056645086 1.629899190740763 1.112750667530184 0.007105823059278198 3.265171328730963 1.7398273632421394e-05 4.759493843045531 -0.972763078171043 KTPEKLDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_A549_PD325901_60min_R1 2 KTPEKLDNTPASPPRSPAEPNDIPIAK 27 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KTPEKLDNT(0.009)PAS(0.99)PPRS(0.001)PAEPNDIPIAK;KT(0.015)PEKLDNT(0.098)PAS(0.789)PPRS(0.098)PAEPNDIPIAK 122.78 2.8283999999999995e-18 104113000.0 3565.1000000000004 3300.9 4684.299999999999 4877.4 4961.3 5623.4 4364.3 4902.9 4548.9 3200.87 3566.7000000000003 True False 3927.0263275120947 3579.0784275095575 5002.2047669841995 5178.665920620902 4612.835403555831 5577.60489483233 4530.385824736594 4805.1078132493585 4357.7255522258665 2998.766521936107 3128.018511174149 1.2554357697960126 1.1441998871567087 1.5991608582605692 1.6555739367018683 1.474682898159811 1.7831112171835235 1.4483244931424801 1.5361506960665936 1.393126522959779 0.9586792761052028 1.0 11.611033334999208 -10.11910275942615 0.7141366289719429 1.0114047696026438 1.4920803184785478 0.5557683982124275 0.17019528547565135 0.41387547727526225 0.4114239848014805 0.10100766807477142 0.03782903436921932 7.601463956555989e-11 10.11910275942615 0.480675548875904 KTPEKLDNTPASPPRS(ph)PAEPNDIPIAK ddPTM_A549_PD325901_60min_R1 1 KTPEKLDNTPASPPRSPAEPNDIPIAK 27 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KT(0.011)PEKLDNT(0.062)PAS(0.397)PPRS(0.53)PAEPNDIPIAK 72.85 6.1438e-06 88842000.0 3260.1 2876.0 3073.9 3754.2 3994.8 4727.3 3431.7 3502.8 3864.9 3022.6 2896.5 True False 3591.0629520412263 3118.370613322876 3282.513338862311 3986.0884075931835 3714.219029311843 4688.80243613132 3562.295221398295 3432.9339061065575 3702.4716935517927 2831.752520159856 2540.2488624263124 1.4136658046216903 1.2275846904009131 1.2922014797113328 1.5691724013945159 1.462147699089693 1.8458043640861321 1.4023410359864417 1.35141637375938 1.4575232168455283 1.1147539762915648 1.0 11.310754126148082 -10.621656745641511 0.6962904257570735 0.9683075894344707 1.4528966875253715 0.4754260840661668 0.15648523084764732 0.5479823508833146 0.4261339698455121 0.15368449133937698 0.0325028725318713 2.389699288989121e-11 10.621656745641511 0.4845890980909008 KTPEVVQSTRPIIEGSISQGT(ph)PIKFDNNSGQSAIK ddPTM_A549_PD325901_60min_R1 2 KTPEVVQSTRPIIEGSISQGTPIKFDNNSGQSAIK 35 3 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 KTPEVVQSTRPIIEGSISQGT(0.956)PIKFDNNS(0.041)GQS(0.002)AIK;KTPEVVQSTRPIIEGS(0.001)IS(0.023)QGT(0.956)PIKFDNNS(0.02)GQS(0.001)AIK 79.19 2.9861e-06 11834400.0 2155.8 2128.74 2645.8999999999996 2644.0 3460.7 2934.7 2766.6000000000004 3233.0 2741.6 2890.1000000000004 3312.8999999999996 True False 2374.655228983921 2308.13639061368 2825.4666850892327 2807.3138750403245 3217.63237076687 2910.8007761966837 2871.884476941611 3168.5152787605643 2626.380086170818 2707.618592772449 2905.4343022033945 0.817315066178937 0.794420437888841 0.9724765357614464 0.9662286539782853 1.107453150231865 1.0018470470969587 0.9884527331296596 1.0905479006555603 0.9039543878789652 0.9319152701952587 1.0 11.504538117415287 -5.769147959736807 12.476318042644829 0.9801209583118353 0.805833638933781 0.5994491841837838 0.058762076650329335 0.21454450289820806 346.8735240239862 0.008998210977070752 0.029627334780096673 1.7015786989828155e-06 5.769147959736807 -0.1742873193780543 KTPLALAGS(ph)PTPK ddPTM_A549_MK2206_60min_R1 2 KTPLALAGSPTPK 13 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 KTPLALAGS(0.965)PT(0.035)PK;KT(0.001)PLALAGS(0.542)PT(0.457)PK 97.28399999999999 6.852e-05 55777000.0 6154.6 5895.9 5775.5 4894.6 8295.3 6291.6 6905.700000000001 6248.2 8651.1 8313.3 7603.2 True False 7193.346014476794 6195.976126574987 6594.552745542637 6093.7772197269405 7075.072358717459 6957.372935973921 8160.37630117133 7133.901484309982 6691.639662967921 6435.319756162401 5715.115602355163 1.2586527578746547 1.0841383722879838 1.153879152125123 1.066256160630545 1.2379578736433374 1.2173634655975867 1.4278584842288213 1.248251475677963 1.1708668955375703 1.1260174253536441 1.0 12.480566965474148 -10.133308438561393 0.9054240974572214 1.014427974723732 1.2051977951237067 0.21644810283502636 0.09814594752433346 0.42250743197040636 0.6892250865927491 0.043134211894979006 0.019273811204024723 7.35684424396903e-11 10.133308438561393 0.1907698203999748 KTPLALAGS(ph)PTPK ddPTM_A549_PD325901_60min_R1 2 KTPLALAGSPTPK 13 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 KTPLALAGS(0.848)PT(0.152)PK;KTPLALAGS(0.906)PT(0.094)PK 114.29 8.4548e-06 86173000.0 6681.5 6194.200000000001 6974.799999999999 6885.4 7203.299999999999 7330.9 7785.6 8125.0 7452.1 6848.7 7232.700000000001 True False 7359.800961339666 6716.206972546787 7448.151870879617 7310.695520122029 6697.3650580359445 7271.199580952151 8081.885268443796 7962.940501060805 7138.91415237582 6416.271913193545 6343.123751862869 1.1602802103897494 1.0588169544342172 1.1742088223790714 1.1525386869482093 1.0558465071833165 1.1463121114130435 1.2741175459599512 1.2553657807357492 1.1254571771958952 1.0115318830582791 1.0 12.630977773523279 -10.082405226274107 0.9734302953203616 1.0132673847386193 1.1546100868164841 0.442056494709271 0.06434671661952766 0.3624020807529702 0.6890716597728128 0.02723635081149791 0.01333141659096809 8.271699976894155e-11 10.082405226274107 0.1413427020778648 KTPSKPPAQLS(ph)PSVPK ddPTM_A549_MK2206_60min_R1 2 KTPSKPPAQLSPSVPK 16 2 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 KTPSKPPAQLS(0.898)PS(0.102)VPK;KT(0.007)PS(0.007)KPPAQLS(0.98)PS(0.006)VPK 83.213 5.5133e-05 88346500.0 3749.8999999999996 3913.1 3156.5 2738.3 4467.7 3256.6 3334.6000000000004 3650.3 4551.2 4802.9 4789.799999999999 True False 4382.791443747201 4112.260075798533 3604.1391639347835 3409.1836229269607 3810.5072483264044 3601.211250443876 3940.4536562384596 4167.741203574907 3520.360466772967 3717.92155424108 3600.3604682450505 1.2173201773553348 1.1421800989285391 1.0010495326018216 0.9469006375877479 1.0583682611601908 1.0002363047273541 1.0944608716246635 1.1575899803183927 0.9777800022587521 1.0326525877152886 1.0 11.813925641137915 -5.621277045454865 3.3673542198950877 1.0104763933372412 1.2057018677601912 0.48851355030015475 0.058290917857483644 0.13399151992193006 2.85463093854795 0.00861499651539852 0.04324849476362261 2.3917894975281323e-06 5.621277045454865 0.19522547442295002 KTPSKPPAQLS(ph)PSVPK ddPTM_A549_PD325901_60min_R1 4 KTPSKPPAQLSPSVPK 16 2 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 KTPSKPPAQLS(0.507)PS(0.493)VPK;KTPSKPPAQLS(0.822)PS(0.178)VPK;KTPSKPPAQLS(0.9)PS(0.1)VPK;KTPSKPPAQLS(0.852)PS(0.148)VPK 113.51 7.043400000000001e-08 283910000.0 16831.7 14537.6 16155.599999999999 15227.1 18786.0 16348.9 16695.8 17828.100000000002 18732.6 16590.3 18010.6 True False 18540.44179315735 15762.734571711644 17252.016167514863 16167.643383746776 17466.53616818171 16215.759978860511 17331.167805292305 17472.504559626123 17945.333966371258 15542.785626681689 15795.410378600154 1.1737866474350171 0.9979313100384666 1.0922170272250817 1.023565896436026 1.1057981875447578 1.026612135435864 1.0972280801752905 1.1061760435992292 1.136110650894126 0.9840064458052495 1.0 13.94721779960228 -11.050732556669036 1.3795894070099648 1.0003841804366649 1.086861583695299 0.33604053003093703 0.04940036788224228 0.4239414196428028 1.449317080732756 0.03346867579303548 0.007603155112128357 8.897488663491037e-12 11.050732556669036 0.08647740325863418 KTPSKPPAQLSPS(ph)VPK ddPTM_A549_MK2206_60min_R1 1 KTPSKPPAQLSPSVPK 16 2 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 KTPSKPPAQLS(0.427)PS(0.573)VPK 69.763 0.00052347 3248500.0 3122.9 3227.6 2736.7 2540.6 4167.2 2895.9 3577.5 2861.4 4697.9 4223.3 4508.4 True False 3649.969172425435 3391.8710538057667 3124.8052114494903 3163.0471140518666 3554.210400256461 3202.3422158571584 4227.485442089934 3267.012212669983 3633.833151004729 3269.2535967907656 3388.8398544899555 1.0770556677647374 1.0008944651992908 0.9220870107831625 0.9333716699126603 1.0487985720385702 0.9449671136316159 1.2474727705084194 0.964050339629192 1.0722941499257264 0.9647117412347629 1.0 11.72657574603631 KTPTLAS(ph)PVPTTPFLR ddPTM_A549_PD325901_60min_R1 1 KTPTLASPVPTTPFLR 16 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 KT(0.419)PT(0.132)LAS(0.441)PVPT(0.004)T(0.004)PFLR 79.461 0.00013786 7127000.0 3588.8 3371.1 3767.1 3402.7 4266.6 3478.1 3833.7 3774.3 3457.9 4053.3 3287.3 True False 3953.132334065075 3655.194427876477 4022.7580594125448 3612.8770509076044 3966.928734970939 3449.7755067603775 3979.5935513811332 3699.018625618931 3312.5764881711657 3797.3739462594936 2882.982939911621 1.3711951879209732 1.2678515634881034 1.3953457731997068 1.2531732327969858 1.3759806483948693 1.1965993481966744 1.380373604119603 1.2830525544949376 1.1490100903173273 1.3171683722748297 1.0 11.49334658435383 -9.198847024558836 0.6726598657290609 1.0186501893122015 1.3281674283422926 0.10139058402962897 0.10881361944426189 0.17994889382353976 0.1795111952258574 0.02042276702158704 0.015341284476248768 6.3263465071263e-10 9.198847024558836 0.3095172390300911 KTPVKEPNSENVDIS(ph)SGGGVTGWK ddPTM_A549_MK2206_60min_R1 1 KTPVKEPNSENVDISSGGGVTGWK 24 2 P61026 P61026 RAB10 Ras-related protein Rab-10 1 KTPVKEPNSENVDIS(0.658)S(0.342)GGGVT(0.001)GWK 85.0 1.0764e-06 16083000.0 2505.4 2439.7 2268.0 1812.9 3489.5 2256.8 1870.9 2268.4 2919.9 3154.0 3453.8 True False 2928.2502688509644 2563.8703091987627 2589.636503660409 2257.060581384174 2976.1991725126973 2495.613078057403 2210.8183126781432 2589.952646683647 2258.547312122163 2441.5092094518677 2596.1261399692585 1.1279306593652798 0.9875753992558783 0.997500261559353 0.8693955762145288 1.146400063807354 0.9612834444504127 0.851583549289451 0.9976220364678873 0.8699682489807322 0.940443213395162 1.0 11.34214476703111 -7.509540002891982 24.91418555905723 0.9351637871056656 1.0174280309436965 0.2346397045307811 0.0805747950194192 815.0287679732736 1522317.202575096 0.012481394291613365 0.019425329537758357 3.093570353368532e-08 7.509540002891982 0.08226424383803088 KTPVKEPNSENVDISS(ph)GGGVTGWK ddPTM_A549_MK2206_60min_R1 1 KTPVKEPNSENVDISSGGGVTGWK 24 2 P61026 P61026 RAB10 Ras-related protein Rab-10 1 KTPVKEPNSENVDIS(0.132)S(0.868)GGGVTGWK 125.12 3.5428000000000006e-17 17307000.0 3553.7 3026.2 2511.4 2433.0 4649.0 3018.2 2925.0 3219.9 4072.4 4867.7 4950.5 True False 4153.477680376656 3180.220654054721 2867.554283638782 3029.0851092215203 3965.1382584930593 3337.583920680986 3456.434638186739 3676.3306855301876 3150.00790228648 3768.0831892355277 3721.154223150677 1.116179935391104 0.8546328540401233 0.7706088250249523 0.8140176213005259 1.0655667625449297 0.8969216862651491 0.9288608939352689 0.9879543993791965 0.8465136657570159 1.0126114004608808 1.0 11.861534468827443 KTPVKEPNSENVDISS(ph)GGGVTGWK ddPTM_A549_PD325901_60min_R1 2 KTPVKEPNSENVDISSGGGVTGWK 24 2 P61026 P61026 RAB10 Ras-related protein Rab-10 1 KTPVKEPNSENVDIS(0.168)S(0.832)GGGVTGWK;KTPVKEPNSENVDIS(0.019)S(0.981)GGGVTGWK 159.54 2.9087999999999997e-34 54416000.0 8432.099999999999 7073.2 6378.4 6676.6 6700.5 7617.1 7051.1 6319.700000000001 8599.0 7306.1 9227.3 True False 9288.120584616061 7669.283387397554 6811.276580435071 7088.9984183412325 6229.879995470112 7555.068863041459 7319.433469009971 6193.648625791262 8237.613933828006 6844.791599133177 8092.4005966740215 1.14775837820405 0.9477142531166378 0.8416880132249641 0.8760068577493324 0.7698432524497852 0.933600453015956 0.9044823450804277 0.765366043339087 1.0179444078946942 0.8458295554407413 1.0 12.982352023803212 KTPVKEPNSENVDISSGGGVTGWK ddPTM_A549_MK2206_60min_R1 1 KTPVKEPNSENVDISSGGGVTGWK 24 2 P61026 P61026 RAB10 Ras-related protein Rab-10 0 145.13 3.1902999999999997e-28 4983800.0 1540.9 1789.5 1459.9 1592.8 2303.8 1746.0 1650.9 1747.7 2205.9 2215.0 2121.2 False True 1800.9662486119794 1880.5779064275064 1666.9357723517776 1983.0360715035092 1964.9140718254066 1930.7605610990015 1950.8471604042688 1995.4418271067746 1706.2671720984547 1714.6299616156907 1594.447497858241 1.1295237071343818 1.1794542679853763 1.0454629422360455 1.2437136212808788 1.232347928962728 1.2109276496670582 1.2235254927018706 1.2514942196511165 1.070130671841134 1.0753756168948092 1.0 10.638840877814129 -8.930076759784425 4.304971487679759 1.0295409361485972 1.1892982113344004 0.5324407421147901 0.05890515739933507 0.10935332073378513 3.741015369759948 0.010980488636081618 0.011464252406648955 1.1746899149225357e-09 8.930076759784425 0.15975727518580318 KTPVKEPNSENVDISSGGGVTGWK ddPTM_A549_PD325901_60min_R1 1 KTPVKEPNSENVDISSGGGVTGWK 24 2 P61026 P61026 RAB10 Ras-related protein Rab-10 0 89.365 1.0107999999999999e-07 6844500.0 1917.3 2008.3 1984.1 1861.9 2419.6 2261.3 1937.4 2202.2 2296.8 2343.1 2455.6 False True 2111.9428845583398 2177.5464891294623 2118.7529573625393 1976.905334318297 2249.6556431668496 2242.8847225316244 2011.128817185959 2158.2753934075195 2200.273483337151 2195.1562661240514 2153.5767673309333 0.9806675650461287 1.0111301914852269 0.9838297800679038 0.9179637170623842 1.044613629424965 1.041469594469751 0.9338551788327847 1.0021817778441255 1.0216833301299455 1.0193071820906807 1.0 11.072519036091249 -6.792787165730161 24.999854154888364 1.0083493540630395 0.9768379261743526 0.1956001982564941 0.03447363897314872 276.07802398518686 220171.64073624508 0.004948077932925366 0.009351645634635107 1.6114351561455342e-07 6.792787165730161 -0.03151142788868688 KTQEQLALEMAELTAR ddPTM_A549_PD325901_60min_R1 2 KTQEQLALEMAELTAR 16 1 P26038 P26038 MSN Moesin 0 ; 72.184 0.00092699 1948490.0 1487.3 1418.2800000000002 1649.75 1456.47 1827.1599999999999 1247.71 1507.4099999999999 1847.98 2031.8200000000002 1824.04 1738.95 False True 1638.2896011076084 1537.8034330540936 1761.7119557526585 1546.4328440166332 1698.8265849598047 1237.5490634369323 1564.775312436403 1811.1205891877348 1946.4296712443797 1708.8698031073861 1525.0701741122857 1.0742388310500044 1.0083492937951 1.1551677986084263 1.0140076635599948 1.1139333873266908 0.8114702421200297 1.0260349582583823 1.187565411697828 1.2762885959509105 1.1205188011116187 1.0 10.574659912593052 -8.243804781017785 22.67645707308774 1.138397269843714 1.0274051654433212 0.232855522822894 0.1018381861256248 368.8361079734713 474288.3233898918 0.020381144336557626 0.026268684250342875 5.704206234756266e-09 8.243804781017785 -0.11099210440039275 KTQMAEVLPS(ph)PR ddPTM_A549_MK2206_60min_R1 5 KTQMAEVLPSPR 12 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KT(0.001)QMAEVLPS(0.999)PR;KTQMAEVLPS(1)PR 91.355 0.00011292 187660000.0 12947.9 14391.1 14225.5 11439.3 19184.5 14289.6 13282.2 13553.099999999999 20388.2 19782.1 21349.4 True False 15133.188974237815 15123.545520642012 16242.889807240372 14241.929013529685 16362.485463553472 15801.715987331208 15695.403812418417 15474.293429627995 15770.3052532652 15313.30987073487 16047.754766535321 0.9430097352805598 0.9424088129873108 1.0121596474736745 0.8874717504550008 1.0196121327623018 0.9846683363010269 0.9780435980457735 0.9642653227663239 0.98271100740842 0.9542337911760714 1.0 13.970083844263314 -2.000000000077431 0.12751500083488654 1.007262255945443 0.8069355086148784 0.0318880219730473 0.035304600481725706 90.4486745576992 0.7534002466793032 0.08916091073615723 3.270245595652841 0.009999999998217086 2.000000000077431 -0.20032674733056455 KTQMAEVLPS(ph)PR ddPTM_A549_PD325901_60min_R1 7 KTQMAEVLPSPR 12 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR 83.38600000000001 0.00023821 366886500.0 28569.350000000002 27561.32 27373.03 29553.699999999997 33761.96 32427.26 30034.4 31647.710000000003 31939.97 33489.14 38389.49999999999 True False 31469.68938035611 29884.00916286094 29230.72842320121 31379.164927677466 31390.63640203897 32163.183145783772 31177.37552745432 31016.471596901793 30597.644135137616 31374.6299851076 33667.83487109095 0.9347108152588011 0.887613037110414 0.8682093319965852 0.9320220634271121 0.9323627884664687 0.9553089252377451 0.9260285268366016 0.9212493679994326 0.9088093799999725 0.9318873668365167 1.0 15.03908332610332 KTQPSMVSNPGSCSDPQPS(ph)PEMKPHSYLDAIR ddPTM_A549_PD325901_60min_R1 1 KTQPSMVSNPGSCSDPQPSPEMKPHSYLDAIR 32 2 C9J494;Q9H000-2;Q9H000 C9J494 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 1 KTQPSMVSNPGSCSDPQPS(0.993)PEMKPHS(0.006)YLDAIR 92.93 8.052899999999999e-10 14294000.0 947.67 997.15 1111.4 1059.7 1270.1 1592.8 1169.9 1322.5 1178.6 1444.5 2010.0 True False 1043.876760762218 1081.1833299982295 1186.826287391123 1125.155262246683 1180.8925576071322 1579.8287648911569 1214.421184693845 1296.12170001882 1129.0675406919047 1353.2940234800872 1762.7827424398029 0.5921755050298635 0.6133389577559645 0.6732686103725297 0.6382835701519274 0.6699024951723218 0.8962129744386843 0.6889227784321335 0.7352702456259049 0.640502946567995 0.7677032403931086 1.0 10.783638962542566 -14.999999985467346 0.2590113283895128 3.155140674301542 0.652214654961529 0.2389419946160225 0.10466337410060426 18.415671958173196 0.23900970686361905 20.421307356155012 0.03873526475250259 1.0000000334626735e-15 14.999999985467346 -2.502926019340013 KTQQLHPVLQKPSVFGNDS(ph)DDDDETSVSESLQR ddPTM_A549_MK2206_60min_R1 2 KTQQLHPVLQKPSVFGNDSDDDDETSVSESLQR 33 2 Q9H0G5 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 1 KTQQLHPVLQKPS(0.001)VFGNDS(0.941)DDDDET(0.047)S(0.01)VS(0.001)ESLQR;KTQQLHPVLQKPS(0.007)VFGNDS(0.932)DDDDET(0.049)S(0.011)VS(0.001)ESLQR 74.949 4.8324e-06 17984300.0 3794.3 3759.2 4552.0 4552.6 6225.9 5033.6 4779.9 4604.0 7248.4 5532.8 5724.4 True False 4434.685078271419 3950.5272231585823 5197.542047911016 5667.987204373983 5310.078357399856 5566.252210966738 5648.345957972237 5256.631099158662 5606.648973316306 4282.936637303517 4302.873494597263 1.0306333857687566 0.9181137275169511 1.2079235084268942 1.3172562966331158 1.234077265824164 1.293612795717975 1.3126916152808965 1.2216559714709132 1.3030011178241885 0.9953666178383402 1.0 12.071084710028476 -5.7681254841806515 24.98609118514597 1.1932494510007978 0.9743735395613201 0.39086861914411863 0.11171589694653587 131.25808913970266 490521.99707924767 0.01855854826274657 0.05965306591646981 1.7055895081728003e-06 5.7681254841806515 -0.2188759114394777 KTQQLHPVLQKPSVFGNDS(ph)DDDDETSVSESLQR ddPTM_A549_PD325901_60min_R1 3 KTQQLHPVLQKPSVFGNDSDDDDETSVSESLQR 33 2 Q9H0G5 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 1 KTQQLHPVLQKPSVFGNDS(1)DDDDETSVSESLQR;KTQQLHPVLQKPSVFGNDS(1)DDDDETSVSESLQR;KTQQLHPVLQKPSVFGNDS(1)DDDDETSVSESLQR 260.22 4.6308999999999994e-150 124857000.0 8273.0 8971.4 9470.77 10139.490000000002 11298.810000000001 12494.7 10875.859999999999 11471.699999999999 14529.5 10759.199999999999 10308.0 True False 9112.868869739294 9727.451363131042 10113.513404566515 10765.783268847437 10505.220564378427 12392.947305804584 11289.746803798955 11242.887944125443 13918.875642697287 10079.862275823438 9040.181347795757 1.0080404937851453 1.0760239190890635 1.118729040433737 1.1908813390643351 1.1620586092490155 1.3708737500964319 1.24884074438968 1.2436573461954683 1.5396677463877524 1.115006645113506 1.0 13.142135998335894 -6.182691950935432 1.0333304940068517 1.2646106220415756 1.0164241561990601 0.2619720879115529 0.13079690871352237 0.9498026488804076 1.6393948598960264 0.029647049120077356 0.1801475084704902 6.566108412651008e-07 6.182691950935432 -0.24818646584251547 KTS(ph)ASDVTNIYPGDAGK ddPTM_A549_MK2206_60min_R1 2 KTSASDVTNIYPGDAGK 17 1 Q15042-4;Q15042;Q15042-3 Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit 1 KT(0.223)S(0.702)AS(0.072)DVT(0.003)NIYPGDAGK;KT(0.164)S(0.66)AS(0.164)DVT(0.011)NIYPGDAGK 128.38 2.3558e-12 81753000.0 18801.8 19445.9 16961.9 15049.099999999999 21766.6 16591.9 15086.7 16046.8 20533.6 21529.7 19699.2 True False 21975.084180123773 20435.613249845574 19367.352474178806 18736.130175579776 18564.761974040655 18347.64384518816 17827.758104592078 18321.48304126396 15882.77238542129 16666.125816973963 14807.34496973838 1.4840664700548294 1.380099760734259 1.3079557823336774 1.2653267830168482 1.253753594042772 1.2390907271144862 1.2039807366564692 1.2373239820310384 1.0726279706375959 1.1255310017450362 1.0 13.854025361001593 -2.0000000000000746 0.11793448025409249 0.8751434519106682 2.731220621880339 0.8160457240282047 0.05550409714203848 15.131555611033704 0.1187058116507796 0.16069240289987602 4.632878689373108 0.009999999999998283 2.0000000000000746 1.856077169969671 KTS(ph)ATVGPK ddPTM_A549_MK2206_60min_R1 2 KTSATVGPK 9 1 P16104 P16104 H2AFX Histone H2AX 1 KT(0.108)S(0.89)AT(0.003)VGPK;KT(0.146)S(0.836)AT(0.018)VGPK 72.958 0.00101 69226000.0 4537.5 5056.700000000001 5372.9 4457.2 6422.1 4428.5 4354.6 4880.6 7273.8 6262.9 6028.9 True False 5303.319068775947 5314.064431088 6134.858011691805 5549.2142000913145 5477.4175973044275 4897.120930599615 5145.774453144603 5572.439996210639 5626.29591387177 4848.106540227045 4531.757740824791 1.1702565256303243 1.172627650241698 1.3537480074067785 1.2245169573167307 1.2086739650622904 1.0806228423208535 1.1354919542120228 1.229642075967733 1.241526188213179 1.0698070853506565 1.0 12.145855024140797 -10.80604758942716 0.8849803264117988 0.9904978160254551 1.2040774847415059 0.46043740643971975 0.06826421585102618 0.4125400528653713 0.5310646976548509 0.06044189632433452 0.01263671712217132 1.5629763643300664e-11 10.80604758942716 0.21357966871605083 KTS(ph)ATVGPK ddPTM_A549_PD325901_60min_R1 2 KTSATVGPK 9 1 P16104 P16104 H2AFX Histone H2AX 1 KT(0.023)S(0.903)AT(0.075)VGPK;KT(0.134)S(0.865)AT(0.001)VGPK 78.705 0.00075768 78956600.0 9949.8 10684.6 10345.9 10690.8 12029.5 11533.0 11459.9 10778.7 11845.2 10507.3 12817.099999999999 True False 10959.89637134437 11585.028739606965 11048.034988950712 11351.14643543157 11184.589419522083 11439.079071753957 11896.012765597901 10563.710372773432 11347.387436792595 9843.867284812966 11240.677954291135 0.9750209387646787 1.0306343431166778 0.9828619798446515 1.0098275639236034 0.9950102178002849 1.017650280371842 1.0583002923819724 0.9397752000128008 1.0094931536100742 0.875736083254219 1.0 13.456441430392797 -5.200817225044601 20.94452092648956 1.0043200262351863 0.975019198196696 0.0 0.047774803625685265 15779.342208692076 5450137.787996939 0.0034096422526739387 5.9826199742931445 6.297711693675965e-06 5.200817225044601 -0.029300828038490323 KTS(ph)DPRR ddPTM_A549_MK2206_60min_R1 1 KTSDPRR 7 2 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 KT(0.135)S(0.865)DPRR 46.158 0.021194 6156400.0 964.41 932.9 579.16 801.38 1441.7 1073.3 1080.6 1188.6 1441.1 1217.0 1221.9 True False 1127.1788304392742 980.3806252619283 661.2935967636523 997.7181359753148 1229.627839808442 1186.8758936011213 1276.9310324870382 1357.0876899348366 1114.6931509638166 942.0788547567925 918.4685072755916 1.2272373211606022 1.0674079922130195 0.7199959405524042 1.0862845356938775 1.3387806223817378 1.2922336304395383 1.3902828702039405 1.4775549506431087 1.2136433009230514 1.0257062134348351 1.0 9.843086444397954 -6.523681192678731 24.99894167312367 1.18383838013699 0.9931343509061201 0.22135740480277954 0.18072113402971032 40.14500377625792 1250653.4271220057 0.029501513246681953 0.061842526261414385 2.994462007606943e-07 6.523681192678731 -0.19070402923086993 KTS(ph)LDLR ddPTM_A549_MK2206_60min_R1 2 KTSLDLR 7 1 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 KT(0.149)S(0.851)LDLR;KT(0.161)S(0.839)LDLR 70.028 0.009023200000000002 25313000.0 2618.6 2663.8 2597.1 2533.3999999999996 3507.8999999999996 3005.7 2846.6 4098.0 4213.7 3993.5 4130.7 True False 3060.5556613766826 2799.3760419902737 2965.407832300023 3154.0831137286464 2991.892556887032 3323.7611789778157 3363.790373012775 4678.904049598652 3259.3036778962137 3091.365576393797 3104.933188479651 0.9857074132005081 0.9015897837598897 0.9550633306064961 1.0158296241063602 0.9635932161078253 1.0704775198738865 1.0833696472096634 1.5069258388421893 1.0497178135714254 0.9956303046596318 1.0 11.600346509730674 -7.262965251796726 6.851837617194601 1.0723164409396453 0.963021971070034 0.19944127833226732 0.1374344007363635 0.25160069351210373 75.7991820547652 0.02198888190163858 0.036649401443555316 5.4580152930390464e-08 7.262965251796726 -0.10929446986961133 KTS(ph)LDLR ddPTM_A549_PD325901_60min_R1 2 KTSLDLR 7 1 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 KT(0.003)S(0.997)LDLR;KT(0.003)S(0.997)LDLR 85.355 0.005705600000000001 85930000.0 8726.2 8592.4 9020.7 7349.799999999999 9371.900000000001 7763.0 7870.8 7254.5 7777.3 8315.2 8088.1 True False 9612.07740011109 9316.51170303042 9632.898947875745 7803.780453393106 8713.650075299809 7699.780701814451 8170.32760106702 7109.803306454845 7450.447127289285 7790.176852919096 7093.314974690227 1.3550896068210843 1.3134214025843796 1.3580249829941358 1.100159866189208 1.228431291489399 1.085498209129041 1.151834879773378 1.0023244888776899 1.0503477082116537 1.0982420604069258 1.0 12.792244295744796 -6.215795051056527 0.39097198525127635 1.0087911128363967 1.489641440780814 0.7717710226472332 0.06127575691980235 0.7472662848149055 0.12502292557843653 0.014307951565897837 0.14892116490068236 6.084220554426689e-07 6.215795051056527 0.4808503279444174 KTS(ph)LDLRR ddPTM_A549_MK2206_60min_R1 1 KTSLDLRR 8 2 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 KT(0.1)S(0.9)LDLRR 43.512 0.014088999999999999 10050000.0 1008.5 1232.5 1572.3 952.27 1830.2 1499.9 1442.9 1313.3 2247.2 2391.1 2613.6 True False 1178.7101445422686 1295.2289855668632 1795.2757824979103 1185.5761927490248 1560.9800044512795 1658.6184224469596 1705.056252799878 1499.4642968125709 1738.2127880410023 1850.9488493089284 1964.5709883095885 0.5999834831911508 0.6592935522688038 0.9138258648737616 0.6034784183437177 0.7945653344878221 0.844264947572149 0.867902591937892 0.76325279449575 0.8847798315176406 0.9421644014511147 1.0 10.939998584111446 -3.8821542149702326 0.08837217850772314 1.1871689396633862 5.0866217092089535e-14 0.5777102759981974 0.08455598014407732 40.20470407205036 0.3708668399677433 0.9455092557653537 5.984593822555055 0.00013117340286188727 3.8821542149702326 -1.1871689396633354 KTS(ph)LDLRR ddPTM_A549_PD325901_60min_R1 1 KTSLDLRR 8 2 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 KT(0.17)S(0.83)LDLRR 54.784 0.007298600000000001 36352000.0 3934.5 3397.6 3952.6 3738.7 4701.3 4970.9 4346.5 5289.4 4312.4 4440.9 4742.4 True False 4333.927543574187 3683.927675878239 4220.847204914662 3969.6310077962385 4371.096906604527 4930.418638496643 4511.908435996063 5183.898767545972 4131.164824774961 4160.500816111266 4159.114864550508 1.042031221718271 0.8857480006809996 1.014842663012344 0.954441302314273 1.0509680662731418 1.185449019578711 1.084824195275906 1.2463947105019944 0.9932798105640759 1.0003332323357 1.0 12.022060813894747 -6.76435410628177 24.869512309960772 1.0403579346677712 0.970841441644011 0.16906483307447728 0.08819062175399676 133.7816704613092 1141491.8179096736 0.014150975308682793 0.027593785229305903 1.7204652046939637e-07 6.76435410628177 -0.06951649302376017 KTS(ph)PASLDFPESQK ddPTM_A549_MK2206_60min_R1 5 KTSPASLDFPESQK 14 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.004)S(0.981)PAS(0.015)LDFPESQK;KT(0.001)S(0.983)PAS(0.016)LDFPESQK;KT(0.019)S(0.979)PAS(0.002)LDFPESQK;KT(0.247)S(0.747)PAS(0.007)LDFPESQK;KT(0.154)S(0.845)PAS(0.001)LDFPESQK 172.6 5.055399999999999e-23 361420100.0 47690.5 53021.0 52237.1 49026.2 81860.4 61862.9 59129.5 60412.700000000004 89513.5 84927.3 88172.0 True False 55739.49047921965 55719.542428998524 59645.10626338593 61037.62120086972 69818.84359981603 68409.19101673055 69872.56476535478 68976.38523113435 69238.83517368653 65742.16394542865 66276.4589765967 0.8410149144947857 0.8407139320565392 0.8999440704043588 0.9209547725297621 1.0534486102293155 1.0321793299320194 1.0542591720240806 1.0407373341338444 1.0446972611819212 0.9919383889933421 1.0 16.01620890375376 -6.443977120698281 1.8294404900606756 1.0284731033778454 0.8486658377845064 0.9015633250281462 0.02508781045717037 0.07825806727370421 0.50863684144312 0.003826640719017662 0.011288559394657099 3.597682878036229e-07 6.443977120698281 -0.17980726559333893 KTS(ph)PASLDFPESQK ddPTM_A549_PD325901_60min_R1 4 KTSPASLDFPESQK 14 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.005)S(0.994)PAS(0.001)LDFPESQK;KT(0.003)S(0.987)PAS(0.01)LDFPESQK;KT(0.009)S(0.989)PAS(0.002)LDFPESQK;KT(0.016)S(0.982)PAS(0.002)LDFPESQK 169.6 6.8862e-23 629972400.0 57337.2 55035.0 59009.3 57033.0 66162.4 60465.7 64284.0 65698.8 63432.700000000004 66550.7 68952.6 True False 63158.03033458424 59672.992595349286 63014.02594974716 60555.79887865911 61515.38127188888 59973.28738653897 66730.3627975545 64388.385894288396 60766.84421215626 62348.67744438647 60471.867326544576 1.0444200440104576 0.986789315982564 1.0420386989122574 1.0013879437798954 1.017256188563012 0.9917551753890234 1.1034943312931682 1.0647659604522355 1.0048779192482817 1.0310360867096633 1.0 15.883976508582755 -8.961061619747008 24.87937591208612 1.002151987201656 1.030252777994841 0.04247371505687714 0.03317618865796939 221.84129408968244 141744.2842147326 0.005635687595693399 0.005989118255455901 1.0938011616001785e-09 8.961061619747008 0.02810079079318495 KTS(ph)QSEEEEAPR ddPTM_A549_MK2206_60min_R1 4 KTSQSEEEEAPR 12 1 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KT(0.018)S(0.981)QSEEEEAPR;KT(0.211)S(0.7)QS(0.09)EEEEAPR;KT(0.022)S(0.968)QS(0.009)EEEEAPR;KT(0.017)S(0.983)QSEEEEAPR 173.68 6.4938e-16 216839600.0 13463.2 14659.300000000001 13767.2 11997.76 15392.9 11440.7 10239.58 12232.4 15505.199999999999 17379.4 16650.0 True False 15735.459016362376 15405.395755067204 15719.595975834922 14937.211738599912 13128.624800851336 12651.347280277965 12099.979142729626 13966.38016015387 11993.296956716516 13453.3814694825 12515.345483377194 1.257293219532942 1.2309205347569956 1.256025732307078 1.1935117379252076 1.049002188416508 1.0108668032441779 0.9668114363123851 1.1159404411731129 0.9582873259588351 1.0749508663065834 1.0 13.611410496406732 -6.776097673606866 2.01046657631649 0.9916457794316828 1.2483801482223538 0.8133801335301105 0.04771573568840461 0.07612625201413731 0.6263527942997195 0.00624810746123817 0.014349008352922594 1.674566220730359e-07 6.776097673606866 0.256734368790671 KTS(ph)QSEEEEAPR ddPTM_A549_PD325901_60min_R1 2 KTSQSEEEEAPR 12 1 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KT(0.021)S(0.978)QSEEEEAPR;KT(0.027)S(0.973)QSEEEEAPR 165.64 2.4361999999999998e-36 9647200.0 1667.4 1658.3 1692.3 1862.1 1861.7 1533.5 2004.0 1640.9 3019.6 2703.7 3382.6 True False 1836.673220524996 1798.0507608043558 1807.149654626596 1977.1176878640633 1730.9406145163352 1521.0116844303045 2080.263316630877 1608.1709622388528 2892.696712941859 2532.987920583672 2966.5616440680965 0.6191252503374023 0.6061059827965207 0.6091731342377975 0.6664677579909677 0.583483784325704 0.5127187184772318 0.7012371783308626 0.5420992904207919 0.9751008271566051 0.8538463799154844 1.0 11.5345760464478 -8.768617052829045 24.999632885592217 0.9882420970597413 0.6066806564901546 0.8449549459986881 0.0636665364185952 25.844385189672504 90015.00328522264 0.007928531641467411 0.008526306234784542 1.7036600799817952e-09 8.768617052829045 -0.38156144056958674 KTS(ph)SDDESEEDEDDLLQR ddPTM_A549_MK2206_60min_R1 1 KTSSDDESEEDEDDLLQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 KT(0.087)S(0.57)S(0.341)DDES(0.001)EEDEDDLLQR 199.04 5.3106000000000004e-49 8234200.0 1832.3 2534.3 1646.3 1747.3 1842.9 1852.7 1823.2 1896.8 2605.1 2644.4 2810.2 True False 2141.547444565985 2663.2850451294958 1879.7700952275711 2175.3885784392783 1571.8118512748672 2048.751484277274 2154.4518401169435 2165.6772087063746 2015.0490094898616 2047.0282033844385 2112.3497824256224 1.0138223614210498 1.2608163038562825 0.8898952772248833 1.0298429722852378 0.7441058599063776 0.9698921557984974 1.0199313854370156 1.0252455472689357 0.9539371870391514 0.9690763435181768 1.0 11.044633033936071 -5.771212733712199 24.993533782652374 0.9666104483619372 1.1373193575962872 0.35170435872649763 0.09413165956863541 138.3771007736067 353877.36908717843 0.011990751552383537 0.03795421123124177 1.6935080535353876e-06 5.771212733712199 0.17070890923435 KTS(ph)SVSSISQVSPER ddPTM_A549_MK2206_60min_R1 1 KTSSVSSISQVSPER 15 1 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 KT(0.365)S(0.54)S(0.072)VS(0.01)S(0.01)IS(0.002)QVSPER 48.004 0.022375 1921000.0 490.59 701.95 394.88 625.97 738.32 539.43 581.12 547.38 858.54 680.92 996.72 True False 573.3895982260694 737.6762567291362 450.87992176605917 779.3326781008609 629.7141060465896 596.5121245553457 686.701981860881 624.9727912809444 664.0820608066583 527.0996990805216 749.2069159274309 0.7653287576987725 0.9846095131356053 0.6018096098431264 1.040210202993305 0.8405075989816202 0.7961914283945619 0.9165718672135106 0.8341791539755087 0.8863800462714656 0.7035435576939831 1.0 9.549220406931973 -10.98105300806513 0.27677464128731977 1.0902125461903835 0.8305429459145255 0.0 0.14092404257322214 5.572721432172352 0.48643091085313445 0.4731056892144518 0.05755406545231978 1.0445927130694795e-11 10.98105300806513 -0.25966960027585806 KTSATVGPK ddPTM_A549_MK2206_60min_R1 1 KTSATVGPK 9 1 P16104 P16104 H2AFX Histone H2AX 0 64.439 0.0063379 2471000.0 3063.3 2912.9 2963.2 2141.0 3746.4 3159.9 3176.7 2664.9 4697.6 4580.6 5160.4 False True 3580.310149505532 3061.154167998148 3383.4263173044656 2665.545096113143 3195.309522826071 3494.2785206281405 3753.8652701291644 3042.657735913971 3633.601100525725 3545.839278635139 3878.930260205384 0.9230148286594767 0.7891748401364823 0.872257578852505 0.6871856200817609 0.8237604979927852 0.900835613487705 0.9677578657808615 0.7844064037781557 0.9367533976579746 0.9141281334734263 1.0 11.9214431223617 -8.869029449122571 0.4884624786267883 0.9982198753060652 0.819443649760628 0.24256895906791465 0.07693788389771453 0.5449839985388071 0.31209041789486147 0.03131420746799168 0.027478317380001897 1.351980883464649e-09 8.869029449122571 -0.17877622554543715 KTSAVSS(ph)PLLDQQR ddPTM_A549_MK2206_60min_R1 1 KTSAVSSPLLDQQR 14 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KT(0.007)S(0.007)AVS(0.244)S(0.742)PLLDQQR 96.14299999999999 1.9811e-05 24266000.0 1915.5 2148.6 2558.0 2306.7 2928.9 2347.1 2000.0 2126.2 3400.9 3189.7 3246.3 True False 2238.7895705212827 2257.9545625873952 2920.7628643577295 2871.841603551696 2498.062689890368 2595.4685641211126 2363.3741115806747 2427.595361214411 2630.601580121326 2469.144554657139 2440.154116677922 0.9174787589110227 0.9253327677767431 1.1969583578327907 1.1769099270916064 1.023731522864336 1.0636494418043723 0.9685347722209541 0.9948532941515149 1.0780473094472751 1.011880576632875 1.0 11.252756553903266 -11.129374568341763 1.487016840827787 0.999977703604903 1.0459149379026207 0.014309574348944865 0.08609912411837961 1.4475293631633177 5.7264723765438275 0.06524613189732913 0.014012054951968592 7.423785783822011e-12 11.129374568341763 0.04593723429771768 KTSAVSS(ph)PLLDQQR ddPTM_A549_PD325901_60min_R1 3 KTSAVSSPLLDQQR 14 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KTS(0.001)AVS(0.215)S(0.784)PLLDQQR;KT(0.001)S(0.001)AVS(0.102)S(0.896)PLLDQQR;KT(0.001)S(0.001)AVS(0.059)S(0.939)PLLDQQR 132.03 3.4175e-09 73018000.0 17756.9 18059.3 18321.2 19294.0 21498.0 22254.0 20150.5 20924.399999999998 21901.2 20602.0 21766.5 True False 19559.56741606112 19581.22059011885 19564.586806325588 20485.746560146745 19988.054644073785 22072.770802290193 20917.338304276687 20507.04642712575 20980.768727474588 19301.186204040692 19089.35848921191 1.0246319920658906 1.0257662980757005 1.0248949338649722 1.0731500784441752 1.0470783842929956 1.156286672219201 1.0957591013913766 1.0742658763894568 1.0990819172541384 1.0110966387345333 1.0 14.22048100036445 -6.250245824843376 22.318033191779783 1.0624372293005417 1.0251645787684247 0.1761437670624867 0.040772603741696896 327.89277407433235 653752.0767446407 0.006868239460957441 0.01793836960357759 5.620231117249008e-07 6.250245824843376 -0.037272650532117035 KTSFDQDS(ph)DVDIFPSDFPTEPPSLPR ddPTM_A549_MK2206_60min_R1 2 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KTS(0.001)FDQDS(0.998)DVDIFPS(0.001)DFPTEPPSLPR;KTS(0.003)FDQDS(0.996)DVDIFPSDFPTEPPSLPR 156.07 7.6175e-41 117501000.0 10034.5 10893.5 11350.0 8808.900000000001 14821.1 10512.2 10007.099999999999 10895.3 16509.9 16477.9 16322.400000000001 True False 11728.078280029142 11447.9326200995 12959.600668670922 10967.080895446548 12640.935823392445 11624.594026566383 11825.260535999478 12439.742140456854 12770.434010892735 12755.53094560144 12269.09760467724 0.9559039024645261 0.9330704660573657 1.0562798574306271 0.8938783640669437 1.0303068922178475 0.9474693576595921 0.9638247992657127 1.013908483026051 1.0408617179819628 1.0396470349000047 1.0 13.582741521856482 -8.300592650398759 5.969656712760591 1.019568640013359 0.9693375871956269 0.27362353212500556 0.04289023339603412 0.2102822578376315 21.240297521120453 0.006503960320000177 0.007942215788279288 5.0050376595390026e-09 8.300592650398759 -0.0502310528177321 KTSFDQDS(ph)DVDIFPSDFPTEPPSLPR ddPTM_A549_PD325901_60min_R1 1 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KT(0.009)S(0.007)FDQDS(0.985)DVDIFPSDFPTEPPSLPR 111.1 5.5576e-13 35806000.0 9623.2 9816.0 9477.7 10176.0 10139.0 10642.0 10377.0 10519.0 10168.0 11032.0 10598.0 True False 10600.14017977459 10643.228769254998 10120.913716039988 10804.548408627199 9426.871617651133 10555.335080343852 10771.902413512278 10309.190293004141 9740.674320172477 10335.437637267107 9294.513186257227 1.1404728754861362 1.1451087922487397 1.0889127287488998 1.16246522998135 1.0142404910016816 1.1356522788036778 1.1589528356836918 1.109169473044291 1.048002636068658 1.1119934342068587 1.0 13.182163588519611 -8.964219506079832 1.6648396533075769 1.0165346021621429 1.1198567025433568 0.18482481070025036 0.04923461905309976 0.1794092216195906 0.9975743442409388 0.00801853449274007 0.008004839777693153 1.0858766487097994e-09 8.964219506079832 0.10332210038121392 KTSFDQDSDVDIFPSDFPTEPPSLPR ddPTM_A549_PD325901_60min_R1 1 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 0 55.881 0.004106800000000001 1733900.0 648.01 663.44 717.19 858.82 858.89 955.72 876.07 879.55 729.58 829.63 912.81 False True 713.7954981602517 719.3504171428822 765.8628262138199 911.8673608782644 798.5645294096447 947.9369331879559 909.4093232538985 862.0066852563731 698.9182897827931 777.2470202144585 800.5401567793408 0.8916423393823587 0.8985813029503807 0.9566825845376307 1.139065108921962 0.9975321320823627 1.184121652312369 1.135994635063093 1.0767813181593773 0.8730583767273045 0.9709032253190233 1.0 9.644829962951414 -4.0528709237358 16.040087235705396 0.9844854813907774 1.0032035687844953 0.0 0.10660324820217555 0.0 0.0 0.015858864312838655 0.0 8.853787133249624e-05 4.0528709237358 0.01871808739371794 KTSGPLS(ph)PPTGPPGPAPAGPAVR ddPTM_A549_MK2206_60min_R1 1 KTSGPLSPPTGPPGPAPAGPAVR 23 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;A0A2R8YHA2 P49815 TSC2 Tuberin 1 KT(0.198)S(0.198)GPLS(0.602)PPT(0.002)GPPGPAPAGPAVR 51.119 0.015009 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KTSS(ph)DDES(ph)EEDEDDLLQR ddPTM_A549_PD325901_60min_R1 2 KTSSDDESEEDEDDLLQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 2 KT(0.002)S(0.107)S(0.891)DDES(1)EEDEDDLLQR;KT(0.003)S(0.155)S(0.842)DDES(1)EEDEDDLLQR 169.33 7.9808e-31 226505000.0 12155.1 13260.4 13301.5 12740.2 14720.7 13670.8 13579.8 13332.3 14051.7 15266.5 14214.4 True False 13389.076803888318 14377.90044537784 14204.219778417339 13527.133218906483 13686.768815658072 13559.46953733929 14096.586720151698 13066.37681751299 13461.155915103029 14302.570584602812 12466.118912505626 1.0740373084727124 1.1533581980318168 1.1394259815834182 1.0851118390453087 1.0979173960813038 1.0877057753505663 1.1307919344496575 1.0481511454543566 1.0798193094082564 1.147315430326508 1.0 13.605724759135892 -11.353032573467722 0.20297230133500452 0.9036766428728371 1.131020282839336 0.0 0.051553614352390344 4.1076785787655155 0.18636229107930485 0.2407536782350451 0.029962353742835072 4.4357537311965215e-12 11.353032573467722 0.22734363996649898 KTSSDDES(ph)EEDEDDLLQR ddPTM_A549_MK2206_60min_R1 1 KTSSDDESEEDEDDLLQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 KTSSDDES(1)EEDEDDLLQR 124.14 5.853899999999999e-11 3669400.0 2738.9 3239.1 2758.2 2367.1 3689.8 2370.7 2887.4 2716.5 3752.7 3907.6 3692.0 True False 3201.159360324064 3403.956354685297 3149.354234742566 2947.0396062631585 3147.035307848503 2621.5659004567 3412.0032048890184 3101.5721939323435 2902.7194418304875 3024.8704460539343 2775.1745059836994 1.1534984028650725 1.2265738054835282 1.1348310630384064 1.061929475032612 1.1339954662537493 0.9446490283058612 1.2294733889822853 1.1176133923271783 1.0459592488947207 1.0899748608715785 1.0 11.43836277720652 -2.000000002974299 0.08636526532375366 0.9097549878322143 1.6587566962565705 0.15707539207535193 0.07671218560337242 106.47658543469225 0.6451263986264819 0.7554605765635994 9.484844803401547 0.009999999931514235 2.000000002974299 0.7490017084243562 KTSSVSSISQVS(ph)PER ddPTM_A549_PD325901_60min_R1 2 KTSSVSSISQVSPER 15 1 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 KTSSVSS(0.001)IS(0.034)QVS(0.965)PER;KTSSVSSIS(0.003)QVS(0.997)PER 74.69800000000001 0.00029837 8439300.0 3619.5 3572.5 3166.2 3421.5 4735.1 5011.0 4407.4 4289.7 4474.8 3921.8999999999996 4799.7 True False 3986.948975464928 3873.5671126898383 3381.0773719073013 3632.838284209708 4402.522911208198 4970.192077391752 4575.126018821823 4204.1385682954515 4286.739717536172 3674.27056468436 4209.367327805132 0.9471610969014248 0.9202254902067698 0.8032269718001253 0.8630366516632701 1.0458870819201664 1.1807456300050043 1.0868916068694359 0.998757827696542 1.018381002109261 0.8728795276225549 1.0 12.039387695714218 -6.76164726695264 24.99999997315693 1.0295019192139387 0.8803144891825049 0.4528509872107658 0.07699403606572154 3.388080852518487 407525.5564448841 0.00971418871309804 0.019220437450361387 1.7312218830589277e-07 6.76164726695264 -0.14918743003143387 KTSTS(ph)PPPEK ddPTM_A549_PD325901_60min_R1 1 KTSTSPPPEK 10 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KT(0.187)S(0.155)T(0.274)S(0.383)PPPEK 41.476000000000006 0.036933 18811000.0 5138.1 4798.2 5139.2 4424.1 4993.1 5325.9 4466.1 4466.7 4620.6 5320.2 6463.9 True False 5659.716129530698 5202.561153284363 5487.97701652012 4697.3666091399 4642.401881259878 5282.527636196518 4636.059879443694 4377.608164441638 4426.41225056933 4984.281664048987 5668.8812780381295 0.99838325269874 0.9177403614783146 0.9680881901304138 0.828623211309437 0.8189273427272246 0.931846580852136 0.8178086031549647 0.7722172946893374 0.7808264159134429 0.8792354998434424 1.0 12.468848340134622 -6.246079056940627 24.04148584772996 0.8732847213925714 0.957037590789542 0.3086800924748322 0.06720907568852118 782.8696795852117 1225317.3657784483 0.01295636226457727 0.03411540497699067 5.674413016400704e-07 6.246079056940627 0.08375286939697058 KTT(ph)PILR ddPTM_A549_MK2206_60min_R1 1 KTTPILR 7 1 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 KT(0.098)T(0.902)PILR 63.419 0.016390000000000002 18630000.0 2923.0 3098.5 2556.5 1974.5 3484.1 2092.2 2494.4 2506.4 3145.9 3360.9 3432.4 True False 3416.330939511205 3256.2004152364498 2919.050141802399 2458.2525886386716 2971.593505359362 2313.5952153100393 2947.6001919634164 2861.6898755280795 2433.358672970002 2601.6703557535757 2580.0403505792115 1.324138569671691 1.2620734456751588 1.131397088866103 0.9527961793647146 1.1517624151468204 0.8967283069005662 1.1424628267157484 1.1091647752275031 0.9431475257445955 1.0083835918184412 1.0 11.33317791353748 -2.0000000000008686 0.3988415779499966 0.9836908600198371 7.079940124082054 0.5728394636625489 0.08479644511077868 27.732598536672345 0.323035494103726 0.01842013320935233 134.40128350818023 0.009999999999979999 2.0000000000008686 6.096249264062217 KTT(ph)PILR ddPTM_A549_PD325901_60min_R1 2 KTTPILR 7 1 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 KT(0.017)T(0.983)PILR;KT(0.364)T(0.636)PILR 58.981 0.019403999999999998 61752000.0 3591.3 3034.7 3343.5 3087.1000000000004 3564.9 2957.0 2974.2 3074.8 3149.3 3200.9 3370.9 True False 3955.8861322246735 3290.4448192805776 3570.4100160988146 3277.7831556872075 3314.513722237354 2932.9191723902263 3087.384808544687 3013.470701866065 3016.945872985758 2998.794627730989 2956.3006698956865 1.3381203652618519 1.1130277961194932 1.2077289879397812 1.1087448543597782 1.1211693573625268 0.9920909609284481 1.0443405976881324 1.0193383685741262 1.0205138819970607 1.0143740311220786 1.0 11.5295772905833 -2.0000000150334567 0.31232037162532184 1.0011874366057578 3.804895222186231 0.8197565472805337 0.04294980326248537 12.584221009163771 0.15730728683217848 0.011947836925294681 20.322662597063523 0.009999999653841874 2.0000000150334567 2.803707785580473 KTT(ph)PKEPTEK ddPTM_A549_MK2206_60min_R1 1 KTTPKEPTEK 10 2 P26358;P26358-2 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 KT(0.193)T(0.805)PKEPT(0.002)EK 44.511 0.019312 6630900.0 3215.7 2832.0 2972.1 2331.8 3954.6 3024.0 2530.7 2479.8 3942.1 3727.0 3839.8 True False 3758.4315436832626 2976.1367035499843 3393.588471132763 2903.0911046784786 3372.883578626943 3343.997672831257 2990.4954320886077 2831.3192440689963 3049.220644240136 2885.0681114860836 2886.271686911218 1.3021752459157434 1.03113532833596 1.175768894703207 1.0058273854964985 1.1685953175934312 1.1585872833786763 1.0361101644207744 0.9809607518615029 1.0564565553782985 0.9995829999543729 1.0 11.494991392845703 -2.000000000000002 0.19652884060744363 1.003624663580557 1.9198434619548517 0.42897786022038387 0.07400124685946917 36.869771926628374 0.4061313362144985 0.05814936960067359 10.47771095450354 0.009999999999999948 2.000000000000002 0.9162187983742947 KTTAS(ph)PSVR ddPTM_A549_PD325901_60min_R1 2 KTTASPSVR 9 1 Q9Y3P9;Q9Y3P9-2 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 KTT(0.005)AS(0.843)PS(0.152)VR;KT(0.043)T(0.014)AS(0.935)PS(0.008)VR 96.745 0.00036915 27622000.0 10073.6 8674.7 8856.2 9321.8 11812.900000000001 10564.900000000001 9768.3 9247.7 10134.0 10138.0 11369.6 True False 11096.264456207626 9405.747412862296 9457.234988656888 9897.586414656162 10983.202656292644 10478.862957181438 10140.03800191886 9063.247368819695 9708.103221934292 9497.884949838095 9971.211277832619 1.1128301413967785 0.9432903536777495 0.948453976667973 0.9926162568292846 1.1014913183827346 1.050911736318074 1.016931415791135 0.9089414632070375 0.9736132302719076 0.952530709178052 1.0 13.283553054920134 -8.038446406974957 24.962547020630424 0.9804222713521659 1.0209365525160232 0.20531243259470666 0.05578677298583223 965.0263441069595 626571.4053214706 0.00905315209077035 0.01168932912271429 9.15279200054535e-09 8.038446406974957 0.04051428116385736 KTTDTASVQNEAK ddPTM_A549_MK2206_60min_R1 1 KTTDTASVQNEAK 13 1 H0YHL7;B4E3S0;Q9ULV4;Q9ULV4-2;Q9ULV4-3 H0YHL7 CORO1C Coronin;Coronin-1C 0 113.35 2.4673000000000002e-05 1926800.0 654.24 824.47 950.58 631.63 1016.6 822.97 944.01 667.39 1314.5 1289.2 1272.6 False True 764.6597173677079 866.4320014039041 1085.3865377643358 786.3793783549484 867.0594866818768 910.0561391567262 1115.5243975366368 761.9945762961559 1016.7678488251594 997.9688246117145 956.5782980267753 0.7993697107126975 0.9057617167263521 1.1346551975967523 0.8220752864424037 0.9064176852751548 0.9513660732571345 1.1661610971498462 0.7965835916077066 1.062921718925197 1.0432693556505717 1.0 9.901739250925093 -7.5372782841679795 24.99092673289182 1.0203246906604535 0.921255712662788 0.14575414778352602 0.11472295479907904 338.4174826456108 587334.2163924999 0.01665635183898248 0.024711018246700255 2.9021624312774615e-08 7.5372782841679795 -0.09906897799766545 KTTDTASVQNEAK ddPTM_A549_PD325901_60min_R1 1 KTTDTASVQNEAK 13 1 H0YHL7;B4E3S0;Q9ULV4;Q9ULV4-2;Q9ULV4-3 H0YHL7 CORO1C Coronin;Coronin-1C 0 136.51 1.7293e-08 3352000.0 1085.7 1294.6 1215.5 1125.0 1633.1 1384.6 1271.8 1491.7 1380.5 1233.0 1320.3 False True 1195.9194647499028 1403.7004853990952 1297.991139395276 1194.4886949396227 1518.3966898891476 1373.3242766626665 1320.1990449556633 1461.9468732839882 1322.4823858180664 1155.148169574904 1157.9114700712787 1.032824611950933 1.2122692638260906 1.1209761479566087 1.0315889649716419 1.3113236453177877 1.1860356444850895 1.1401554255908655 1.2625722355043203 1.1421273732927588 0.9976135476953133 1.0 10.177309238704614 -10.253550439430008 0.8557770885140255 1.00724546330854 1.162951313106978 0.36256282787575067 0.08136469225461487 0.46132851062545205 0.654953397512541 0.039754522646235864 0.015276635245938756 5.5776281920329104e-11 10.253550439430008 0.15570584979843805 KTTEEQVQAST(ph)PCPR ddPTM_A549_MK2206_60min_R1 2 KTTEEQVQASTPCPR 15 1 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 KTTEEQVQAS(0.183)T(0.817)PCPR;KTTEEQVQAS(0.026)T(0.974)PCPR 153.36 5.9501999999999995e-15 20050700.0 3734.4 3747.0 3362.6 3171.2 4888.7 3524.3 3101.6 4035.3 5235.0 5417.1 4937.299999999999 True False 4364.675422685815 3937.7062952689957 3839.4672430372543 3948.1441423605784 4169.578706021733 3897.2390867589947 3665.1205722393092 4607.316132587956 4049.280858577184 4193.373347660657 3711.2321474521455 1.1760717867466939 1.06102397770302 1.0345532401343165 1.0638364795021187 1.1235025297148964 1.0501199957093894 0.9875751304739875 1.2414518816213087 1.0910879992665286 1.1299140503887672 1.0 11.857682532936206 -10.512812432575469 1.0186333967325667 1.0040018542963594 1.0883721528322698 0.0 0.07610771671476227 0.6257553242147645 1.2349929180881543 0.033759548788905726 0.011624439916232805 3.070347754433543e-11 10.512812432575469 0.08437029853591049 KTTEEQVQAST(ph)PCPR ddPTM_A549_PD325901_60min_R1 4 KTTEEQVQASTPCPR 15 1 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 KTTEEQVQAS(0.037)T(0.963)PCPR;KTTEEQVQAS(0.041)T(0.959)PCPR;KTTEEQVQAS(0.187)T(0.812)PCPR;KTTEEQVQAS(0.033)T(0.967)PCPR 145.17 8.2702e-14 35504600.0 9184.9 9245.75 10105.300000000001 9239.300000000001 10534.800000000001 10446.800000000001 9900.6 9846.7 10317.0 10609.199999999999 11232.2 True False 10117.344286433998 10024.921800462442 10791.106426105376 9809.990577027258 9794.87199108701 10361.724724425503 10277.372750816206 9650.299843913283 9883.412368333935 9939.333301422595 9850.710606782259 1.0270674563790516 1.0176851397461861 1.095464769686326 0.9958662850447596 0.9943315139461305 1.0518758633810041 1.043312828999381 0.9796551973894155 1.0033197362969084 1.0089965788436948 1.0 13.266012085566386 -8.251387467317578 24.951862467470164 0.9999680209798231 1.0320013518608597 0.27033377828149996 0.02698479269524075 709.7707948431083 1761866.4112687653 0.004218685206606354 0.005411219323034611 5.605476454547785e-09 8.251387467317578 0.03203333088103666 KTTS(ph)TEEPR ddPTM_A549_PD325901_60min_R1 1 KTTSTEEPR 9 1 Q5THJ4-2;Q5THJ4;H3BLS7;A0A2R8YD87 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 KT(0.191)T(0.191)S(0.592)T(0.027)EEPR 63.091 0.0028793000000000004 4843600.0 2051.1 1705.6 1901.6 1610.4 2384.8 1888.9 1828.6 1714.5 1540.9 1917.4 2129.0 True False 2259.3261620599856 1849.3368978037197 2030.654011249738 1709.870750516239 2217.299875113369 1873.5174246627985 1898.1883736483157 1680.3029525007687 1476.141331624093 1796.3350367744697 1867.1464968429555 1.2100422574662153 0.9904615952367161 1.0875708010502911 0.9157667882018661 1.1875339609733178 1.0034121199544948 1.0166253032945445 0.8999309670354687 0.7905867772668137 0.9620750379318299 1.0 10.86661941092857 -8.078792826069755 2.448919072095532 0.8982484589655838 1.0619872314213408 0.3688433302975417 0.09257507736185763 0.24949923516794112 2.9545453291780817 0.01694912029592309 0.022925007065634835 8.340789750991828e-09 8.078792826069755 0.16373877245575696 KTTTT(ph)PGR ddPTM_A549_MK2206_60min_R1 5 KTTTTPGR 8 1 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KT(0.102)T(0.057)T(0.155)T(0.686)PGR;KT(0.013)T(0.007)T(0.028)T(0.952)PGR;KT(0.001)T(0.007)T(0.043)T(0.949)PGR;KT(0.001)T(0.004)T(0.029)T(0.966)PGR;KT(0.008)T(0.008)T(0.045)T(0.939)PGR 80.102 0.0024522 630502000.0 17507.6 14958.279999999999 12687.38 9484.35 19433.1 20036.8 18307.4 22042.0 19425.9 19701.7 18410.5 True False 20462.454860275862 15719.592560020363 14486.641262703275 11808.016175768647 16574.516732871907 22157.0808766486 21633.61760517602 25166.521000793924 15025.96466678787 15251.07228657509 13838.664746049004 1.478643730141521 1.1359183019812928 1.0468236299198788 0.8532626805010133 1.1976962399933853 1.601099620754563 1.56327348065517 1.818565697097263 1.085795843929079 1.1020624147231644 1.0 13.756417127640765 -8.972108221095299 24.99990506133432 1.037850763404621 1.3246339259835305 0.17739497339082488 0.2624572212347648 238.49441452555592 213768.69907469134 0.050320006133789855 0.05269037069327271 1.0663303710888044e-09 8.972108221095299 0.28678316257890946 KTTTT(ph)PGR ddPTM_A549_PD325901_60min_R1 3 KTTTTPGR 8 1 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KT(0.001)T(0.01)T(0.063)T(0.926)PGR;KT(0.001)T(0.013)T(0.041)T(0.945)PGR;KT(0.003)T(0.008)T(0.202)T(0.787)PGR 77.288 0.0027756 752125000.0 20271.0 16978.6 14618.5 14263.5 15725.5 12899.0 9351.5 12946.3 14076.400000000001 17019.2 20004.0 True False 22328.89699727852 18409.44620840189 15610.599318181694 15144.524000241168 14620.995130029878 12793.954820649818 9707.37644983715 12688.07589032413 13484.817859999588 15944.604807485157 17543.63481580389 1.2727634399436945 1.0493518818470873 0.8898155645669931 0.8632489309797122 0.8334074029435907 0.7292647706691089 0.5533275488094647 0.7232295942967468 0.7686444685825321 0.9088541214459005 1.0 14.098660066183848 -5.373227746367649 1.4039003103694465 0.8347417232046732 1.3994477655282904 0.6166157355780042 0.1130100213219417 0.6904546328687075 1.3952778702217759 0.020879797035536263 0.514503783801551 4.234208636351707e-06 5.373227746367649 0.5647060423236172 KTVEDEDQDS(ph)EEEKDNDSYIK ddPTM_A549_MK2206_60min_R1 1 KTVEDEDQDSEEEKDNDSYIK 21 2 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 KTVEDEDQDS(1)EEEKDNDSYIK 226.4 1.8783999999999997e-76 60947000.0 6944.5 6252.2 5963.8 6986.9 8949.1 6714.2 7274.0 8049.2 9438.8 9380.8 9888.9 True False 8116.561823275931 6570.410274694643 6809.55651698852 8698.690813653859 7632.699244801087 7424.692187474747 8595.591643818918 9190.198749641164 7300.926870666347 7261.670764751451 7433.213210244371 1.0919317923088465 0.8839259804413221 0.9160986405722449 1.1702463749681524 1.0268371199526183 0.9988536555418751 1.1563763073515192 1.236369587377816 0.9822033438519282 0.9769221680260023 1.0 12.859770274751671 -4.924542130232059 19.678815689297696 1.0200973045559938 3.2861413779005506 0.006643568893199725 0.10507548194255684 935.7014938492613 257713.0921226844 0.014334255286552987 5218.76508658388 1.1897559071920216e-05 4.924542130232059 2.266044073344557 KTVEDEDQDS(ph)EEEKDNDSYIK ddPTM_A549_PD325901_60min_R1 3 KTVEDEDQDSEEEKDNDSYIK 21 2 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 KTVEDEDQDS(1)EEEKDNDSYIK;KTVEDEDQDS(1)EEEKDNDSYIK;KTVEDEDQDS(1)EEEKDNDSYIK 276.9 7.230699999999997e-128 260548000.0 50737.3 46784.5 48966.1 46289.2 57679.1 46902.6 45054.7 51702.0 50146.4 51446.5 55561.4 True False 55888.11334517384 50727.19400521703 52289.23400307941 49148.37875359927 53627.91899809268 46520.64077610747 46769.28126337786 50670.76305056563 48038.92119680341 48198.159210085396 48727.70003273375 1.1469474920349194 1.0410340313854354 1.0730905412722769 1.008633256250201 1.1005633133118764 0.9547062706603504 0.9598089224806365 1.0398759435911522 0.985864737398489 0.9891326530434922 1.0 15.572454507893816 -2.0000000000004503 0.38640558789987567 0.9925429684383827 3.092839717400315 0.5491264949256671 0.03852991922626884 31.049582551155524 0.3677961400531985 0.008343078983403671 49.754992817596445 0.009999999999989632 2.0000000000004503 2.100296748961932 KTVEDEDQDS(ph)EEEKDNDSYIKER ddPTM_A549_PD325901_60min_R1 2 KTVEDEDQDSEEEKDNDSYIKER 23 3 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 KTVEDEDQDS(1)EEEKDNDSYIKER;KTVEDEDQDS(1)EEEKDNDSYIKER 150.82 2.4143999999999997e-28 61223000.0 8396.7 8167.400000000001 9189.6 10088.9 10913.5 12712.8 10128.5 11228.900000000001 11959.9 12541.3 11862.5 True False 9249.12680267617 8855.695461492798 9813.261517553961 10712.068439445653 10146.973409531089 12609.271171715398 10513.94561002786 11004.930780598366 11457.266994672587 11749.440177688355 10403.487702583157 0.8890409704026119 0.8512237159942 0.9432665081266309 1.0296612776103802 0.9753434328577736 1.2120234609961187 1.0106173920326043 1.0578116776997653 1.101290963397571 1.129375120496466 1.0 13.344779643272108 -6.156822774455093 1.606326994663606 1.055226651705539 0.864234918268854 0.5993895801974986 0.06356238033476735 0.21935916846474374 1.0460815069206706 0.009058234243167556 0.03782349466921547 6.969108493089397e-07 6.156822774455093 -0.19099173343668507 KTVFPGAVPVLPAS(ph)PPPKDSLR ddPTM_A549_MK2206_60min_R1 2 KTVFPGAVPVLPASPPPKDSLR 22 2 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;M0R2S2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 KTVFPGAVPVLPAS(0.991)PPPKDS(0.009)LR;KTVFPGAVPVLPAS(0.997)PPPKDS(0.003)LR 76.294 3.5696e-05 13760200.0 1907.87 2012.92 1809.42 2104.4 2797.1000000000004 2043.5700000000002 2105.8 2395.7 3173.9 2386.03 3387.6000000000004 True False 2229.8718130568723 2115.3690301235306 2066.02296404463 2619.9780944701047 2385.650295295964 2259.8192209880203 2488.3966020832922 2735.297811523545 2455.0167176768155 1847.0241658301961 2546.3654269963113 0.8757077006371492 0.8307405558120606 0.8113615359919913 1.028908917272187 0.9368844981963462 0.8874685451780185 0.9772346795560294 1.074196885696056 0.9641258444875878 0.7253570702179 1.0 11.314223758844232 -6.2563609382920395 24.991471676899575 0.9811451858215108 0.8384169865055994 0.1688450974025827 0.09042518598237112 202.99512580931008 998953.0387182866 0.006704626362828832 0.017166566092825818 5.541649599373856e-07 6.2563609382920395 -0.1427281993159114 KTVFPGAVPVLPAS(ph)PPPKDSLR ddPTM_A549_PD325901_60min_R1 2 KTVFPGAVPVLPASPPPKDSLR 22 2 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;M0R2S2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 KTVFPGAVPVLPAS(0.995)PPPKDS(0.005)LR;KTVFPGAVPVLPAS(0.999)PPPKDS(0.001)LR 94.01899999999999 2.3212e-07 21626400.0 3253.6000000000004 3918.9 3979.5 3536.3 4213.1 4437.1 4826.9 4487.700000000001 4460.9 4351.9 4419.4 True False 3583.9030768262746 4249.159456380747 4249.572800677502 3754.729219479988 3917.1863904059596 4400.965728715819 5010.590320881031 4398.189302967457 4273.423886197623 4077.1202913000984 3875.841816884807 0.9246773336345349 1.0963191113397894 1.096425757667551 0.9687519245813383 1.010667249974196 1.1354864147301755 1.2927747203337296 1.1347700733830475 1.1025795396449825 1.0519315503379 1.0 11.920293976505716 -5.2557456896833195 23.824910875939565 1.0732952135162332 0.9246772059548061 0.21970901350474048 0.08443448777390566 449.5721348905617 1881093.595049897 0.012822751674206035 0.15351615281071956 5.54950580878598e-06 5.2557456896833195 -0.14861800756142718 KTVFS(ph)PTLPAAR ddPTM_A549_MK2206_60min_R1 1 KTVFSPTLPAAR 12 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KT(0.056)VFS(0.822)PT(0.122)LPAAR 85.493 0.00016374 14683000.0 2002.1 2138.0 1822.9 1614.1 2828.1 1857.5 2127.0 1832.4 3173.8 3009.9 3015.6 True False 2340.0055333545606 2246.8150678636534 2081.4146307418696 2009.554572459703 2412.0902363614164 2054.059417091291 2513.448367666048 2092.1483114896478 2454.9393675171486 2329.9614995336624 2266.74329367401 1.0323204837023272 0.9912084328799066 0.9182401185659829 0.8865382233920951 1.0641214834926558 0.9061720499289558 1.1088367944797888 0.9229754058734312 1.0830248728951148 1.0278894421066913 1.0 11.146405301275195 -7.753966711352927 24.99988402012077 1.0343831761845241 0.966177766986646 0.1762367767311005 0.06631945100034292 216.34430311700015 723778.6922085398 0.01002675197006222 0.01471389076649275 1.762111106950427e-08 7.753966711352927 -0.0682054091978781 KTVFS(ph)PTLPAAR ddPTM_A549_PD325901_60min_R1 1 KTVFSPTLPAAR 12 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KT(0.025)VFS(0.488)PT(0.488)LPAAR 76.85 0.00046925 30204000.0 1976.5 2206.0 2480.4 2588.2 2492.3 2603.2 2362.6 2103.0 2582.1 2493.3 2305.6 True False 2177.1528249776043 2391.907361957673 2648.7348598568856 2748.0672357713165 2317.2494459682357 2582.00040228821 2452.5100358643285 2061.0540152284157 2473.5833164946257 2335.872612490761 2022.0258164025904 1.076718609286108 1.1829262230752045 1.3099411680951139 1.3590663449888265 1.146003887374139 1.27693740670526 1.2128974892257398 1.0193015333974622 1.2233193544953875 1.1552140400692505 1.0 10.98158570176366 -11.945709573492238 0.3237484019195635 0.78056972529132 1.2251913982490463 0.11427126083417471 0.10307487966690629 5.40836317220743 0.3827064561765402 0.9564905537315895 0.03487245009237123 1.133157888571592e-12 11.945709573492238 0.44462167295772637 KTVFSPT(ph)LPAAR ddPTM_A549_MK2206_60min_R1 1 KTVFSPTLPAAR 12 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KT(0.003)VFS(0.365)PT(0.632)LPAAR 112.17 3.3597e-05 20111000.0 2058.6 2027.4 2245.6 1922.5 3132.6 2815.0 2517.6 2144.4 3714.4 3542.1 2890.4 True False 2406.0413520621833 2130.5860002744507 2564.059846834134 2393.512586304304 2671.7986897301284 3112.8814315542295 2975.0153316577516 2448.375266949575 2873.094330677955 2741.937149904712 2172.6339090182246 1.1074306361854729 0.9806465743863979 1.180161939013825 1.1016640108438198 1.2297509850324797 1.4327685021545513 1.369312758725242 1.1269157020825258 1.3224014956004513 1.2620336719055194 1.0 11.085229384105826 -6.680077376511287 5.988739692930686 1.196241103017607 1.0890003003082618 0.20051221684587073 0.12470460473145775 0.4301366575589737 24.72759106558985 0.022906337946582003 0.047960000432804586 2.0889239224750113e-07 6.680077376511287 -0.10724080270934522 KTVFSPT(ph)LPAAR ddPTM_A549_PD325901_60min_R1 1 KTVFSPTLPAAR 12 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KT(0.001)VFS(0.401)PT(0.598)LPAAR 84.84200000000001 0.0002757 35772000.0 2174.4 2293.6 2375.4 2697.2 2370.5 3079.5 2962.3 2578.4 3283.1 2893.3 3382.8 True False 2395.1434872913233 2486.889721389899 2536.608928440591 2863.7999182143562 2204.004257781046 3054.4215730049714 3075.0319475327597 2526.9717892843305 3145.1227242877912 2710.616544226334 2966.737045336001 0.8073325848196495 0.8382575480693618 0.8550164337713675 0.9653029151055124 0.7429051594734205 1.0295558812018137 1.036503033650053 0.8517680369606656 1.0601285777019673 0.9136692948529722 1.0 11.53466134488049 -7.326023133926286 0.7058802475979892 1.0237475822542406 0.829320919049554 0.2671517285123931 0.08687577504867167 0.455717763793267 0.44221326589603116 0.015366089495951755 0.0404595342508285 4.720378961576797e-08 7.326023133926286 -0.1944266632046866 KTVPS(ph)DVDS ddPTM_A549_MK2206_60min_R1 1 KTVPSDVDS 9 1 Q9H6H4 Q9H6H4 REEP4 Receptor expression-enhancing protein 4 1 KTVPS(0.898)DVDS(0.102) 55.426 0.014223 13428000.0 6340.3 6389.9 5988.2 5449.9 9008.9 6927.6 5791.9 7790.0 10344.0 9310.5 9417.3 True False 7410.387634547686 6715.118616530387 6837.416803888569 6785.125744655306 7683.702744017664 7660.674033831291 6844.213258432057 8894.25635587445 8001.100515973718 7207.251583576924 7078.72450574223 1.0468535155643381 0.9486339821648819 0.965910849947909 0.9585237763033781 1.0854643004943445 1.082211071728669 0.9668709741253614 1.2564772578251164 1.1303025720923678 1.0181568130996528 1.0 12.789273713470937 -6.7637000486388565 24.993559821352633 1.0735399345328052 0.9767365071309786 0.2750051095077135 0.07562717829522081 66.50886793104148 735323.8759389686 0.011710831577707312 0.02290926442017015 1.7230582175931037e-07 6.7637000486388565 -0.09680342740182657 KTVPSDVDS(ph) ddPTM_A549_MK2206_60min_R1 1 KTVPSDVDS 9 1 Q9H6H4 Q9H6H4 REEP4 Receptor expression-enhancing protein 4 1 KT(0.001)VPS(0.16)DVDS(0.839) 61.353 0.0061657 12249000.0 6552.4 7415.7 6787.7 6218.0 9992.4 7262.3 7344.7 7790.2 10865.0 9723.7 10425.0 True False 7658.284929200555 7793.1274549843365 7750.29792587997 7741.410279136622 8522.531196852242 8030.791765675409 8679.136918663293 8894.484706486928 8404.094847839759 7527.10941659706 7836.184784637071 0.9772976441564661 0.9945053197651555 0.989039709869338 0.9879055295267851 1.0875868080039104 1.0248344042907036 1.1075717529886278 1.1350529563729364 1.0724727758227552 0.9605579275458184 1.0 12.935935702780133 -6.737359671056439 24.30549772158784 1.0507135903642963 0.9878420615358922 0.3304488961158243 0.04642270575948004 172.50843589569578 174124.5405830804 0.006711418214204477 0.013964243712977545 1.830797576841037e-07 6.737359671056439 -0.06287152882840419 KTVPSDVDS(ph) ddPTM_A549_PD325901_60min_R1 1 KTVPSDVDS 9 1 Q9H6H4 Q9H6H4 REEP4 Receptor expression-enhancing protein 4 1 KTVPS(0.253)DVDS(0.747) 73.26 0.0018309 11407000.0 6835.8 6842.5 7487.2 7471.5 9045.9 8288.1 7539.8 7743.8 9093.7 8244.8 9118.1 True False 7529.765383750015 7419.141488755838 7995.32641619113 7932.99758599235 8410.54719066086 8220.604461510799 7826.731214936874 7589.343834106422 8711.523413193601 7724.221920933627 7996.6315043981895 0.9416171521231914 0.9277833403571579 0.9998367952548093 0.9920424095607205 1.0517612554780116 1.0280084129160414 0.9787535177320763 0.9490675955159673 1.0893991311719462 0.9659344583635328 1.0 12.965176692748692 -5.981213778411698 1.337784213712132 1.0302953797332843 0.9266330958718957 0.16947861150178878 0.04241423235030692 0.43347515465792663 1.3034704461398403 0.0068062017156027745 0.04231817447881093 1.0442060895714042e-06 5.981213778411698 -0.10366228386138865 KTVQSQIGPPLTDSRPLGS(ph)PPNATR ddPTM_A549_MK2206_60min_R1 2 KTVQSQIGPPLTDSRPLGSPPNATR 25 2 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-4;Q96QT6-2;K7EPF7 Q96QT6 PHF12 PHD finger protein 12 1 KTVQSQIGPPLT(0.004)DS(0.039)RPLGS(0.918)PPNAT(0.039)R;KTVQSQIGPPLT(0.016)DS(0.124)RPLGS(0.753)PPNAT(0.107)R 71.881 1.048e-05 12817400.0 2495.1 3432.2 3849.8 3191.2 3816.5 2696.8 3522.3999999999996 3443.6 4699.4 4422.6 4084.8999999999996 True False 2916.211880661787 3606.8843198885115 4395.759529008754 3973.044143258413 3255.0979056869805 2982.173586009041 4162.374485315882 3931.740845582706 3634.993403399738 3423.531588370903 3070.5065924953465 0.9497494282504806 1.174687046334351 1.4316072597767646 1.2939376691028663 1.0601175433535286 0.9712317808721854 1.355598615384569 1.2804860459157814 1.1838415889690836 1.1149728832168568 1.0 11.584260985269443 -10.410767483324026 0.8449001529134926 1.0039099465396613 1.1947633947633591 0.0875801911277525 0.14753787511680014 0.7851429608685375 1.0444366881412326 0.08755527912164461 0.028446813200318735 3.883582332346126e-11 10.410767483324026 0.19085344822369787 KTVQSQIGPPLTDSRPLGS(ph)PPNATR ddPTM_A549_PD325901_60min_R1 2 KTVQSQIGPPLTDSRPLGSPPNATR 25 2 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-4;Q96QT6-2;K7EPF7 Q96QT6 PHF12 PHD finger protein 12 1 KTVQSQIGPPLT(0.019)DS(0.197)RPLGS(0.774)PPNAT(0.009)R;KTVQSQIGPPLT(0.011)DS(0.227)RPLGS(0.753)PPNAT(0.009)R 86.145 7.9402e-08 27776000.0 3392.3 3071.2 4304.1 3352.3 4000.2 4580.5 3921.8 4032.1 4440.7 3513.5 3710.3999999999996 True False 3736.68379872073 3330.0208023773384 4596.202108655867 3559.3639573743076 3719.239751940831 4543.197926659933 4071.046245091306 3951.676602378742 4254.072821950227 3291.657010382338 3254.0443221635023 1.1483198840501156 1.0233483237140797 1.4124583606163084 1.0938277432582137 1.1429591559674996 1.3961696513215642 1.2510727703870386 1.214389298714717 1.307318647436812 1.0115587510479354 1.0 11.668018186234915 -10.90722714594111 1.14059281272876 0.9990773130569446 1.2276009142826003 0.3443917003015299 0.11406038736497928 0.44329805294523333 1.0174864063657827 0.0803467807127191 0.018789803922871152 1.238148837007951e-11 10.90722714594111 0.22852360122565574 KTVS(ph)EPNLK ddPTM_A549_MK2206_60min_R1 2 KTVSEPNLK 9 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6;C9JF80;C9JAH2 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 KT(0.052)VS(0.948)EPNLK;KT(0.049)VS(0.951)EPNLK 76.32600000000001 0.00083722 38487000.0 6620.5 6975.4 5905.8 5492.9 7321.9 6038.5 4842.5 5479.4 8928.900000000001 8254.6 9822.3 True False 7737.8785443154065 7330.418065657687 6743.33124484905 6838.660746585655 6244.85820926228 6677.49006196811 5722.31956766471 6256.121729958726 6906.518406523371 6389.880126931319 7383.151828310858 1.0480454315790095 0.9928575540799578 0.9133404542747716 0.9262522166160339 0.8458255165925526 0.9044226933493535 0.7750510487570295 0.8473510873729414 0.9354430962722687 0.8654677941782509 1.0 12.850021111295112 -4.104648030161776 15.709350342377057 0.938272269291302 0.9204032686884113 0.0 0.07949534584745058 0.0 0.0 0.011188048179901891 0.0 7.85872279318988e-05 4.104648030161776 -0.01786900060289076 KTVS(ph)EPNLK ddPTM_A549_PD325901_60min_R1 2 KTVSEPNLK 9 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6;C9JF80;C9JAH2 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 KT(0.099)VS(0.901)EPNLK;KT(0.001)VS(0.999)EPNLK 92.19 0.00042327 54287000.0 32874.0 22484.1 18433.5 17020.5 18650.8 17748.6 15319.4 15319.2 15248.400000000001 24719.0 43830.0 True False 36211.344279440294 24378.91401495582 19684.508159640347 18071.817628639874 17340.832149767015 17604.061286129578 15902.388150097346 15013.646538320088 14607.562775739378 23158.238121429073 38439.18786126196 0.9420423867990502 0.6342203197150341 0.5120947984303772 0.470140464306016 0.4511237909696491 0.4579717279581368 0.4137025008825269 0.390581783166404 0.38001746624986604 0.6024642925603367 1.0 15.230290234888292 -10.812658408489364 1.04559693540247 1.0015618267692348 0.5017407724140239 0.1476577035419966 0.18903895676773377 0.3044667834682211 0.5879262966718046 0.11198632762525809 0.02747729926011694 1.539364941783557e-11 10.812658408489364 -0.49982105435521085 KTVSLTPS(ph)PTTQVETPDLVDHDNTSPLFR ddPTM_A549_MK2206_60min_R1 1 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KT(0.001)VS(0.004)LT(0.121)PS(0.771)PT(0.051)T(0.051)QVETPDLVDHDNTSPLFR 93.29 4.2777999999999994e-10 4985000.0 999.09 1155.4 1254.1 798.08 1755.0 1206.6 1343.1 1280.7 2075.1 1793.6 1601.5 True False 1167.7119665946796 1214.20492488759 1431.9502377603706 993.6096358271726 1496.8418248344417 1334.2816111237428 1587.1238846320023 1462.2431469792575 1605.0931632537759 1388.4245142907 1203.803350848563 0.9700188704172965 1.0086405923622783 1.1895217244170209 0.8253919837710831 1.2434271957951566 1.1083883511233006 1.3184245446012723 1.2146860581078462 1.3333516326585593 1.153364885811289 1.0 10.233384022335429 -6.794410628100153 24.999963377827104 1.1787809074278577 1.0127768599775127 0.3841620845813869 0.11856023976208899 215.13241486539522 163120.43493055349 0.0211559368757993 0.03998276784149479 1.605422598249876e-07 6.794410628100153 -0.16600404745034503 KTVSLTPS(ph)PTTQVETPDLVDHDNTSPLFR ddPTM_A549_PD325901_60min_R1 2 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KTVSLT(0.004)PS(0.482)PT(0.482)T(0.033)QVETPDLVDHDNTSPLFR;KTVSLT(0.001)PS(0.812)PT(0.185)T(0.002)QVETPDLVDHDNTSPLFR 185.81 4.315499999999999e-67 43329000.0 7311.700000000001 9953.0 7099.5 7479.6 9283.9 7523.200000000001 8608.1 10166.7 7184.5 8409.8 6845.1 True False 8053.97840141095 10791.77424005654 7581.314762761632 7941.597904595919 8631.830891716289 7461.933553509009 8935.685956033063 9963.917192878143 6882.56044977175 7878.803792774549 6003.196094664027 1.3416150787694194 1.7976714519868617 1.2628797465903743 1.3228949678413555 1.4378725524872886 1.242993471451247 1.4884881011925621 1.6597687358130153 1.1464826970901967 1.312434854456556 1.0 12.551515079093454 -8.92268990685273 6.1744194909232695 1.0635272525475534 1.4403091795496699 0.33043345853770967 0.17550367858521373 0.11638142857588916 7.1283902961707195 0.027924114689003156 0.029489350322210086 1.1948409353366858e-09 8.92268990685273 0.37678192700211643 KTVSLTPSPT(ph)TQVETPDLVDHDNTSPLFR ddPTM_A549_MK2206_60min_R1 1 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KT(0.001)VS(0.003)LT(0.065)PS(0.359)PT(0.465)T(0.107)QVETPDLVDHDNTSPLFR 105.08 6.2827e-15 5225500.0 793.51 1394.6 1089.7 1200.1 2129.3 1705.9 1679.2 1699.5 2405.3 1394.4 1770.3 True False 927.435088543118 1465.5791831817842 1244.235845696098 1494.1245538745354 1816.082790666655 1886.4172057152273 1984.2889040831355 1940.4093295004654 1860.5033904748238 1079.4040715471417 1330.685652205565 0.6969603129078056 1.1013714476838596 0.9350336374588698 1.1228230735020521 1.3647722042065766 1.4176279744119558 1.4911778005528549 1.4582026388308198 1.398153942210998 0.8111638310355771 1.0 10.377954088394226 -6.412565131658226 2.9016537084472516 1.2639217340816016 0.9254273475289434 0.357890279721914 0.21346570811394472 0.25072401413640755 4.040870202530699 0.030912043140194665 0.07902603620025925 3.8675404832047154e-07 6.412565131658226 -0.3384943865526582 KTVSLTPSPTT(ph)QVETPDLVDHDNTSPLFR ddPTM_A549_MK2206_60min_R1 1 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KTVSLT(0.004)PS(0.016)PT(0.089)T(0.446)QVET(0.446)PDLVDHDNTSPLFR 63.901 0.0002853 4271400.0 1397.8 2101.7 1894.3 1653.6 1962.3 1877.0 1866.7 1469.6 2552.0 2294.2 2620.0 True False 1633.7144670710786 2208.66755291349 2162.9402243756244 2058.7320742329257 1673.6482694430922 2075.6228941482377 2205.8552270438217 1677.9203004612443 1973.976074706585 1775.938626608901 1969.3816916785727 0.8295570503037463 1.1215030393782963 1.0982839098763404 1.0453697639883088 0.8498343802600213 1.0539464761547124 1.1200750145918612 0.8520036047613981 1.002332906336758 0.9017747215346592 1.0 10.943527035985557 KTVSLTPSPTTQVET(ph)PDLVDHDNTSPLFR ddPTM_A549_MK2206_60min_R1 1 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KTVSLTPSPTT(0.001)QVET(0.341)PDLVDHDNT(0.329)S(0.329)PLFR 62.051 0.00055143 1982600.0 487.04 625.43 349.74 336.44 529.46 371.1 276.63 479.42 704.37 703.17 682.95 True False 569.2404450152366 657.2617155724813 399.3383910009663 418.86781510336556 451.577135371421 410.36955568375646 326.89009024328124 547.3792531621738 544.8313196477578 544.3234086272257 513.3546665388864 1.1088638754433469 1.2803267573349195 0.7778996024198342 0.8159423540988432 0.8796591612111394 0.799387991250823 0.6367724139866555 1.0662789078215384 1.0613156072410752 1.0603262113055973 1.0 9.003812089413739 KTVSLTPSPTTQVET(ph)PDLVDHDNTSPLFR ddPTM_A549_PD325901_60min_R1 1 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KTVSLTPSPTTQVET(0.395)PDLVDHDNT(0.335)S(0.27)PLFR 79.875 2.4396e-06 18529000.0 3169.7 3395.0 3166.6 3596.6 3538.4 3372.2 3575.4 4996.6 3521.6 4633.8 4246.2 True False 3491.4856105901895 3681.1085647535365 3381.5045183126963 3818.7538135287546 3289.874990817317 3344.737921249345 3711.4638035339535 4896.938893243132 3373.599398693882 4341.221077190745 3723.9443188795467 0.9375772867733696 0.9884972087501839 0.9080437914093509 1.0254594286409024 0.8834382872317404 0.8981707659516519 0.9966485762737322 1.3149871410312906 0.9059210100404842 1.1657588582035843 1.0 11.862615786270688 -7.798356025877966 24.749454492863997 0.989919842463297 0.9422271723203828 0.07615024696572525 0.12039576941289341 470.8627887018099 315671.5844871217 0.01802610451188485 0.024907073230352156 1.590904001240103e-08 7.798356025877966 -0.04769267014291423 KTVSLTPSPTTQVETPDLVDHDNT(ph)SPLFR ddPTM_A549_MK2206_60min_R1 2 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KTVSLTPSPTTQVET(0.163)PDLVDHDNT(0.483)S(0.354)PLFR;KTVSLTPSPTTQVETPDLVDHDNT(0.5)S(0.5)PLFR 135.11 6.9294e-28 59628000.0 2675.5 3698.0 3104.5 2656.6000000000004 4281.0 3147.8999999999996 3148.8 2786.9 4031.1 4761.9 4408.4 True False 3127.0589903052446 3886.212404564918 3544.7647820166403 3307.467119259306 3651.2705710064065 3481.008688593095 3720.896201272616 3181.9516095233025 3118.0622863439335 3686.1834827168173 3313.672614349552 0.9436837473816229 1.1727810368882055 1.0697389858812139 0.9981273059193072 1.1018802989754986 1.050498674346678 1.1228919191230962 0.9602492399955735 0.9409687223902126 1.1124163161907248 1.0 11.694215358257749 -8.278674847369684 24.800973204534433 0.9704546147603216 1.0681473928742204 0.08655675435690191 0.07248242337140622 546.1039247863284 785814.302771686 0.009128471296788402 0.011050027797775915 5.264112385626763e-09 8.278674847369684 0.09769277811389887 KTVSLTPSPTTQVETPDLVDHDNT(ph)SPLFR ddPTM_A549_PD325901_60min_R1 3 KTVSLTPSPTTQVETPDLVDHDNTSPLFR 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KTVSLTPSPTT(0.001)QVET(0.169)PDLVDHDNT(0.46)S(0.371)PLFR;KTVSLTPSPTTQVETPDLVDHDNT(0.626)S(0.374)PLFR;KTVSLTPSPTTQVETPDLVDHDNT(0.861)S(0.139)PLFR 199.73 1.1265999999999998e-77 62536000.0 6511.099999999999 7652.7 7509.5 7818.8 9186.0 7670.3 8188.799999999999 10618.599999999999 9222.5 9932.9 10752.9 True False 7172.102078781521 8297.619886152988 8019.13982829192 8301.749518216819 8540.807049979621 7607.83561987986 8500.429265083294 10406.80369286945 8834.910397107662 9305.734998840684 9430.36146824923 0.7605331039461248 0.8798835457251526 0.8503533883925123 0.8803214538666098 0.9056712278458657 0.8067384951779875 0.9013895483967509 1.1035423963235949 0.936858086177675 0.9867845501120878 1.0 13.203097355504779 -8.008621044976863 24.856411101030858 0.980452494110494 0.8531192115255595 0.6422002474225328 0.0542911429958432 215.7869258540733 622163.5468460836 0.008472115854515216 0.011396731205310588 9.803450380405886e-09 8.008621044976863 -0.12733328258493448 KTVT(ph)PAK ddPTM_A549_MK2206_60min_R1 2 KTVTPAK 7 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KT(0.037)VT(0.963)PAK;KT(0.013)VT(0.987)PAK 78.939 0.010218000000000001 92244000.0 14539.6 12253.8 9853.9 6687.0 20321.8 16408.4 15007.4 15684.2 17620.7 19314.8 19009.8 True False 16993.529020909034 12877.466079788426 11251.331191983825 8325.315300190841 17332.490140125672 18144.725996985584 17734.05032106791 17907.483380848018 13629.639584475828 14951.573265288822 14289.142016210437 1.1892616786669614 0.9012063891015624 0.7874042527689666 0.5826322735645092 1.212983265227729 1.269826136264945 1.2410857349552105 1.2532231368778282 0.9538459040447334 1.0463590639890683 1.0 13.802631672741793 -6.787224697473779 24.99380257111384 1.0550906646568772 0.8621513167852436 0.2879488589664986 0.1785035239642481 298.1937159368056 289039.50580639957 0.028906567429759507 0.05464136455970091 1.632207249760748e-07 6.787224697473779 -0.19293934787163358 KTVT(ph)PAK ddPTM_A549_PD325901_60min_R1 2 KTVTPAK 7 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KT(0.01)VT(0.99)PAK;KT(0.01)VT(0.99)PAK 83.86200000000001 0.0088411 519640000.0 23342.5 19846.0 15971.5 14557.9 16220.7 14275.7 9603.4 14078.4 15789.4 20221.3 27502.4 True False 25712.213416159735 21518.49206954305 17055.422034431645 15457.108419610258 15081.413990377132 14159.44343229325 9968.862642182125 13797.595267708859 15125.826427117565 18944.523667011345 24119.779152077826 1.066021925575746 0.8921512893574447 0.7071135240043185 0.6408478420200912 0.6252716451210925 0.587046976799266 0.4133065472667624 0.5720448425631729 0.6271129736200148 0.7854352043426296 1.0 14.557929077100018 -5.490185239911872 2.714396547192812 0.7294715526674961 1.0674481553595392 0.3527985440258833 0.15142351892693767 0.3989825168359122 5.081351701844524 0.029063388099501854 0.2361266294134729 3.2345566374491617e-06 5.490185239911872 0.3379766026920431 KTVTAMDVVYALK ddPTM_A549_PD325901_60min_R1 2 KTVTAMDVVYALK 13 1 P62805 P62805 HIST1H4A Histone H4 0 ; 86.46700000000001 0.00022292 8922400.0 3949.9 3729.6000000000004 4296.6 4038.5 4812.3 5210.3 4653.2 4809.3 4896.3 5138.4 4583.8 False True 4350.890940237304 4043.906481032337 4588.193113554707 4287.948972901036 4474.300649533739 5167.86904426946 4830.280072328739 4713.374738677135 4690.525538341905 4813.960547075172 4020.0216591022695 1.082305347879375 1.0059414659809076 1.1413354212074864 1.0666482264323418 1.1130041151402443 1.285532637011593 1.2015557332612512 1.1724749611746375 1.1667911111178861 1.1974961717370949 1.0 11.972987559050186 -3.774894987760213 14.484673311041307 1.1058119225347225 0.5423895379237083 0.0 0.08665769020949984 0.0 0.0 0.012789045637819449 0.0 0.0001679210001374017 3.774894987760213 -0.5634223846110142 KTYDLLFK ddPTM_A549_MK2206_60min_R1 1 KTYDLLFK 8 1 P61026 P61026 RAB10 Ras-related protein Rab-10 0 50.607 0.031261000000000004 2066800.0 1010.8 1055.0 820.46 811.05 1328.8 1163.8 1014.7 1095.9 1204.9 1138.9 1311.4 False True 1181.3983283126665 1108.694993730662 936.8135651645597 1009.757286409418 1133.3352802507156 1286.9525435320832 1199.0578555104555 1251.2471810529926 931.9920738299239 881.6216989995977 985.7431872012529 1.1984849032199987 1.1247300596400742 0.9503627083889715 1.0243614153462695 1.1497267188510933 1.3055657500266693 1.2163998403223573 1.2693439805610682 0.9454714837807395 0.8943726017551492 1.0 9.945068024197411 -8.781434935580501 24.960576558270713 0.9742504013399061 1.1496024317374958 0.4571420926628652 0.09972060778744442 186.72670574397748 233091.1423703324 0.018629085563033238 0.019844375305206736 1.6541125793386986e-09 8.781434935580501 0.17535203039758962 KTYDLLFK ddPTM_A549_PD325901_60min_R1 2 KTYDLLFK 8 1 P61026 P61026 RAB10 Ras-related protein Rab-10 0 ; 90.71 0.0026553 5761900.0 3634.3 3913.4 4636.2 4159.9 4761.6 5102.6 4062.5 4292.3 4966.2 4501.9 4611.3 False True 4003.251460569745 4243.195952078495 4950.840411735404 4416.847575181631 4427.161642628234 5061.04611736164 4217.100660585299 4206.686709255789 4757.487884425702 4217.649265700942 4044.139333439134 0.9898895983797329 1.049221009027422 1.224201246183378 1.0921600892087826 1.0947104631193254 1.2514519654439624 1.0427683897327737 1.040193317394538 1.1763906958121386 1.042904044088475 1.0 11.981616988183632 -11.03052015151265 1.3056649049983564 0.9996327589766361 1.115856664213982 0.13605426038981927 0.07840211661698698 0.5448095456774054 1.6461983431373859 0.056117665714494794 0.012445479825569882 9.321372176374724e-12 11.03052015151265 0.11622390523734594 KTYVT(ph)PR ddPTM_A549_PD325901_60min_R1 1 KTYVTPR 7 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 1 KT(0.003)Y(0.011)VT(0.986)PR 46.406000000000006 0.038486 17796000.0 4774.3 4897.2 4980.0 5624.0 5865.8 5789.7 5917.6 5625.6 5797.8 6071.8 6275.5 True False 5258.983421346103 5309.904230724897 5317.972747172749 5971.381706969276 5453.806443911437 5742.55060276892 6142.797506234974 5513.392994802172 5554.138628392603 5688.425511780129 5503.653283672129 0.9555440995798379 0.964796282948631 0.9662623121535936 1.084985081579316 0.9909429542175968 1.043407043791355 1.116130902442386 1.0017696810878218 1.0091730605324014 1.0335726504894795 1.0 12.426173871402254 -6.041749907140666 24.960203484556605 1.0186262126170915 0.9615099009097855 0.36699112150348023 0.0384723561331081 438.66649293688556 262256.6518648332 0.0055025546986905175 0.014559894341316236 9.083434583424652e-07 6.041749907140666 -0.05711631170730602 KTYVTPR ddPTM_A549_PD325901_60min_R1 1 KTYVTPR 7 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 49.418 0.055225 4765300.0 2432.2 2867.2 2104.0 2402.0 3083.4 2868.5 2400.6 2585.6 3057.3 3086.7 2835.2 False True 2679.115153508994 3108.8290064392754 2246.7900923798115 2550.3660846622006 2866.8326211525305 2845.139887048145 2491.9561466587256 2534.0281796360387 2928.8123130471395 2891.805235220482 2486.488373813596 1.0774694069451694 1.2502889774912473 0.9035996773770744 1.0256899294287203 1.1529644181507233 1.144240173013347 1.0021989939316482 1.0191192552207793 1.17789101444908 1.1630077444461324 1.0 11.279893970143931 -5.713418119034541 24.999998808459186 1.0714940247980258 1.1638786985451257 0.14788199912750932 0.09020226117352166 188.6186690510617 98192.57826577476 0.012803293508936091 0.04958673048996683 1.9345585618282403e-06 5.713418119034541 0.09238467374709991 KVAEPELMGT(ph)PDGTCYPPPPVPR ddPTM_A549_MK2206_60min_R1 1 KVAEPELMGTPDGTCYPPPPVPR 23 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KVAEPELMGT(0.982)PDGT(0.015)CY(0.003)PPPPVPR 45.125 0.009526799999999998 3582400.0 1136.0 1182.8 930.4 793.26 1087.4 863.99 719.63 739.7 1348.1 2117.5 1884.8 True False 1327.72902746655 1242.9994678527266 1062.3447103199499 987.6087356107944 927.44490047007 955.4168483298539 850.3774559584004 844.5547402362436 1042.7575024733333 1639.1552793323795 1416.7521421663266 0.9371639455835562 0.8773584530827543 0.7498451413636407 0.6970935184898766 0.6546274911940017 0.674371204315912 0.6002302242212288 0.5961203199204994 0.7360197111675965 1.1569809782154137 1.0 10.468371668503844 -10.386027330404149 0.8945197168019537 0.9895140950413517 0.7209666462742643 0.561997354865373 0.11402239868096829 0.38007033052032285 0.5777514722243113 0.059995859771089954 0.02104526483595059 4.1112384802773415e-11 10.386027330404149 -0.26854744876708736 KVAEPELMGT(ph)PDGTCYPPPPVPR ddPTM_A549_PD325901_60min_R1 1 KVAEPELMGTPDGTCYPPPPVPR 23 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KVAEPELMGT(0.998)PDGT(0.001)CY(0.001)PPPPVPR 75.22399999999999 3.399e-05 6204400.0 1506.1 1499.9 1731.4 1494.7 1508.9 1751.7 1327.1 1796.7 1465.5 1698.1 1958.3 True False 1658.9981632677798 1626.301836899508 1848.903215753996 1587.024224290003 1402.9200694224096 1737.4347359742842 1377.6035167169844 1760.8634090161172 1403.9101314135287 1590.8816762004415 1717.4415146864999 0.9659706890051576 0.9469328783497886 1.0765450817063154 0.9240630383735058 0.8168662847762227 1.011641282172822 0.8021254318918981 1.0252828954921027 0.8174427597144681 0.926309083946209 1.0 10.746045255374515 -6.491402243277394 24.340640743831955 0.9122536334394333 0.9929906061812529 0.16883676223166721 0.08011316358158568 720.4133899662107 557091.5020452399 0.01208984416136667 0.028063318240123064 3.225505276824023e-07 6.491402243277394 0.08073697274181957 KVAFSEITS(ph)PSKR ddPTM_A549_MK2206_60min_R1 2 KVAFSEITSPSKR 13 2 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 KVAFS(0.002)EIT(0.07)S(0.91)PS(0.017)KR;KVAFS(0.003)EIT(0.172)S(0.816)PS(0.009)KR 51.888000000000005 0.005182 40047000.0 5647.6 6565.6 7775.2 6617.3 10078.3 7209.6 7023.5 7108.3 11198.2 10375.8 10645.9 True False 6600.7768094366975 6899.760996055007 8877.840274806185 8238.538797061883 8595.79542064328 7972.5150866548465 8299.579036343437 8115.923293255762 8661.825579850822 8031.899573693941 8002.22921810722 0.8248672500533533 0.8622298622041995 1.1094208917082327 1.0295304686374078 1.0741751062557614 0.9962867682688797 1.0371583730147822 1.01420780035784 1.0824265768657422 1.0037077612722696 1.0 12.966186238900502 -5.681369550156477 6.446461785612779 1.0401753781732992 0.83697773140462 0.818382389794901 0.03549274715577043 0.061884138766079344 3.9458203479356855 0.005126867117177581 0.020250172231647257 2.0827179011351246e-06 5.681369550156477 -0.20319764676867924 KVAFSEITS(ph)PSKR ddPTM_A549_PD325901_60min_R1 3 KVAFSEITSPSKR 13 2 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 KVAFSEIT(0.089)S(0.901)PS(0.01)KR;KVAFSEIT(0.043)S(0.944)PS(0.012)KR;KVAFSEIT(0.158)S(0.839)PS(0.002)KR 71.354 0.00047071 67931300.0 12380.5 12780.4 13421.7 13972.2 16738.5 16176.599999999999 14836.7 15861.1 17157.199999999997 15131.699999999999 16910.2 True False 13637.359245957603 13857.449160817696 14332.577273238656 14835.231060831473 15562.845504690158 16044.863132934628 15401.318737453757 15544.737917707756 16436.142549770186 14176.281879607915 14830.352602589826 0.9195573167677826 0.9343978212896819 0.9664353678776159 1.0003289509273565 1.0493914690856654 1.0818935707659918 1.0384998354499153 1.0481704875306321 1.10827726017114 0.955896481998163 1.0 13.85626527889023 -6.293579747493097 1.426874511343551 1.0536035291173054 0.9240908542268619 0.5509676688056195 0.039155340845183455 0.22002679796234045 0.8278873930727987 0.005841980521646092 0.023082313674300064 5.086514097558553e-07 6.293579747493097 -0.1295126748904435 KVAGAAT(ph)PK ddPTM_A549_MK2206_60min_R1 5 KVAGAATPK 9 1 P16402 P16402 HIST1H1D Histone H1.3 1 KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK 85.288 0.00079365 7715406000.0 33939.17999999999 35316.71 36539.12 32726.82 45776.90000000001 36572.47 31833.98 34353.46000000001 57105.2 48824.03 45666.05 True False 39667.28385071495 37114.17968913519 41720.916650629704 40744.89236916278 39043.178650292764 40442.5445005592 37617.80210028847 39223.168158058914 44170.96337826587 37794.64771323852 34325.909466136756 1.155607658111654 1.0812293182136696 1.2154351421275023 1.1870011021662366 1.137425905315333 1.1781929489867307 1.0959011045985318 1.1426694519704834 1.2868111600026642 1.1010530616974257 1.0 15.067010324682302 -11.083571616103251 1.4220426661537788 1.0004210653496994 1.1770757237682192 0.28326884509871775 0.06122472823547446 0.2751475946587385 0.9976278620345482 0.04569409292345234 0.010139937010382499 8.249514379781289e-12 11.083571616103251 0.1766546584185198 KVAGAAT(ph)PK ddPTM_A549_PD325901_60min_R1 10 KVAGAATPK 9 1 P16402 P16402 HIST1H1D Histone H1.3 1 KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK 88.441 0.00087614 11139615000.0 91126.89999999998 106112.1 97034.89999999998 120195.7 109294.49999999999 92781.0 99029.99999999999 104428.6 130716.0 112091.80000000002 104681.20000000001 True False 100378.03580392193 115054.53906744732 103620.2718322558 127619.91540475938 101618.03136555597 92025.42229744246 102798.64084129526 102345.689650348 125222.46109713486 105014.3046182938 91806.07602880061 1.0933702881760483 1.2532344703563345 1.128686425937091 1.3901031492155655 1.1068769711241906 1.002389234766695 1.1197367896330321 1.1148030073547746 1.3639888176666122 1.1438709632394006 1.0 16.48630201866278 -11.182655015876694 1.6063079967996865 1.000235407651815 1.2006517765459088 0.02107845975956213 0.12143038930177416 0.44028973228546664 2.045449474697861 0.09189001100541976 0.01943405690789981 6.56666685841298e-12 11.182655015876694 0.20041636889409387 KVAGAATPK ddPTM_A549_MK2206_60min_R1 2 KVAGAATPK 9 1 P16402 P16402 HIST1H1D Histone H1.3 0 ; 89.171 0.00084151 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVAGAATPK ddPTM_A549_PD325901_60min_R1 2 KVAGAATPK 9 1 P16402 P16402 HIST1H1D Histone H1.3 0 ; 98.04 0.00011203 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVAS(ph)DDDISEQDGEVNR ddPTM_A549_MK2206_60min_R1 2 KVASDDDISEQDGEVNR 17 1 Q5TF58;H0Y4W3 Q5TF58 IFFO2 Intermediate filament family orphan 2 1 KVAS(0.998)DDDIS(0.002)EQDGEVNR;KVAS(0.996)DDDIS(0.004)EQDGEVNR 128.12 2.4054e-12 15969100.0 4507.6 5478.6 4354.2 4300.9 6084.7 4900.9 4076.9 4348.5 6995.2 7009.6 6651.3 True False 5268.372679760764 5757.437339007396 4971.691033614708 5354.620693074735 5189.6486903533505 5419.509985045873 4817.619957751627 4964.9131917227305 5410.79836903899 5426.12649162137 4999.598643458663 1.0537591225755207 1.1515799066271586 0.9944180299591712 1.0710101099976441 1.0380130607370541 1.0839890102251728 0.963601341090623 0.9930623527587932 1.082246547154006 1.0853124177719276 1.0 12.287596567882847 -5.76602134513134 24.999996076334007 1.0343732582478598 1.1026695131080775 0.2479052171327314 0.045708107682347524 106.36875409194367 580382.6406326969 0.006233667631233209 0.020382859317522324 1.7138730703229908e-06 5.76602134513134 0.06829625486021773 KVAS(ph)DDDISEQDGEVNR ddPTM_A549_PD325901_60min_R1 2 KVASDDDISEQDGEVNR 17 1 Q5TF58;H0Y4W3 Q5TF58 IFFO2 Intermediate filament family orphan 2 1 KVAS(0.984)DDDIS(0.016)EQDGEVNR;KVAS(0.984)DDDIS(0.016)EQDGEVNR 120.33 1.0547000000000002e-15 10950000.0 3573.2 3634.0 3354.3 3938.1 3752.5 4089.1 3420.9 3167.3 3679.5 4061.2 4684.0 True False 3935.9486335491893 3940.24993352411 3581.942969044489 4181.347492925981 3488.9373454222214 4055.799725336785 3551.0842214883082 3104.1257168012157 3524.8634108059264 3804.775138911271 4107.897694322406 0.9581418346881252 0.9591889152862777 0.8719649892924919 1.0178801430973052 0.8493243028530968 0.9873176079682737 0.8644529357185115 0.7556482531421072 0.8580699114483058 0.9262098090149407 1.0 12.00418453697749 -5.64366692581955 24.228094454376254 0.9159787635576596 0.9586817789716369 0.05559472581208924 0.0743041752059544 16.50176631274209 3364.12105408114 0.011385018982029694 0.04409399283761735 2.271606350783476e-06 5.64366692581955 0.04270301541397725 KVAS(ph)PSPSGSVLFTDEGVPK ddPTM_A549_MK2206_60min_R1 1 KVASPSPSGSVLFTDEGVPK 20 1 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 KVAS(0.818)PS(0.152)PS(0.029)GS(0.002)VLFTDEGVPK 123.2 5.5283e-15 10074000.0 760.25 1185.8 1209.7 947.95 1456.7 1328.7 1116.0 1132.0 1720.4 1342.9 1733.5 True False 888.5616136720471 1246.152155038691 1381.2536501225752 1180.1977925550932 1242.4213596788218 1469.3021520803225 1318.7627542620162 1292.464466604606 1330.7321469142676 1039.5379573154444 1303.0241078338959 0.6819226201034473 0.9563538752251124 1.0600369109200332 0.90573749592171 0.9534906930802546 1.1276093383435872 1.012078553522915 0.9918960507593034 1.0212644101623205 0.7977887370353707 1.0 10.347648060763579 -5.275091384684118 3.408751922587482 1.0088705974066727 0.6448235994077228 0.5072348126165211 0.08294477531106748 0.09847512191544915 1.932785183797381 0.006934573231309515 0.0910156229385241 5.307727467414698e-06 5.275091384684118 -0.3640469979989499 KVASDDDISEQDGEVNRFS(ph)DDEVGSMNITDEMK ddPTM_A549_PD325901_60min_R1 2 KVASDDDISEQDGEVNRFSDDEVGSMNITDEMK 33 2 Q5TF58;H0Y4W3 Q5TF58 IFFO2 Intermediate filament family orphan 2 1 KVASDDDIS(0.002)EQDGEVNRFS(0.822)DDEVGS(0.146)MNIT(0.03)DEMK;KVASDDDIS(0.021)EQDGEVNRFS(0.804)DDEVGS(0.171)MNIT(0.004)DEMK 74.39699999999999 2.6408000000000002e-05 11293800.0 2064.25 2671.1000000000004 2308.1 1998.3500000000001 2890.3999999999996 2853.9 2255.1 2611.68 2381.5 3031.7 3050.1 True False 2273.811140379466 2896.2029712262656 2464.741545732816 2121.783540917862 2687.3882753386774 2830.6587846075286 2340.9190645380704 2559.587993576675 2281.413836889336 2840.277944606841 2674.957036176936 0.8500365088589272 1.082710089192885 0.9214135077307406 0.7932028485774587 1.0046472668508755 1.058207195975425 0.8751239862467942 0.956870693233583 0.8528786840441914 1.0618032013950336 1.0 11.38530000451522 -11.233017232411099 1.7135326050105126 1.0000150255708502 0.923808257297802 0.1294340413553151 0.0879708300454789 0.7598595313779384 4.024293622508818 0.06374875452569186 0.013114501218689846 5.847668806647475e-12 11.233017232411099 -0.07620676827304818 KVASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIKK ddPTM_A549_MK2206_60min_R1 2 KVASGVLSPPPAAPPPSSSSVPEAGGPPIKK 31 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVAS(0.053)GVLS(0.947)PPPAAPPPSSSSVPEAGGPPIKK;KVAS(0.099)GVLS(0.901)PPPAAPPPSSSSVPEAGGPPIKK 75.14 3.2843e-06 29084000.0 2789.0 2847.1 2809.6 2665.7 3533.5 2623.1 2183.4 3006.8 4292.3 4216.2 3764.6 True False 3259.7150154966635 2992.0052290526696 3208.0435276385765 3318.7966196678203 3013.7268307991467 2900.6747009271403 2580.095517612622 3433.0231079388086 3320.1009033946207 3263.7574917219285 2829.7459223256333 1.1519461834996334 1.057340592117077 1.133686067829736 1.1728249499305787 1.06501675893301 1.0250654230268186 0.9117763885643008 1.2131912907280986 1.1732858689539123 1.153374748585061 1.0 11.46645680660386 -11.084231243864 1.443864411929523 1.0006105250913295 1.106543026517901 0.0 0.09228076337230737 0.5948981557001342 2.235966115091414 0.0595504058871899 0.01341105748485407 8.236994123309021e-12 11.084231243864 0.10593250142657151 KVASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIKK ddPTM_A549_PD325901_60min_R1 2 KVASGVLSPPPAAPPPSSSSVPEAGGPPIKK 31 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVAS(0.01)GVLS(0.99)PPPAAPPPSSSSVPEAGGPPIKK;KVAS(0.003)GVLS(0.997)PPPAAPPPSSSSVPEAGGPPIKK 130.77 2.0518999999999997e-28 95394000.0 3264.1 2835.8999999999996 2877.9 2861.33 3850.1000000000004 3301.4 3575.8999999999996 3519.1000000000004 3789.6000000000004 3341.9 3855.5 True False 3595.469029096581 3074.8912455919162 3073.211600218566 3038.0678555480804 3579.682258123943 3274.5144929756802 3711.9828313075604 3448.9087898194543 3630.3362906889897 3130.891863667778 3381.2979420281863 1.0633399040073734 0.9093819291616522 0.9088851834142654 0.8984916170166809 1.0586710545763858 0.9684193907537013 1.0977982109086255 1.0199955309914848 1.0736517020772869 0.9259437994954658 1.0 11.723361429124195 -6.768151974150363 24.999328716718583 1.0355114707770916 0.9398973554508234 0.23192342249588083 0.06232201511920556 113.75814731586742 423664.85820996814 0.007593947757663299 0.01458630699135515 1.705485478215238e-07 6.768151974150363 -0.09561411532626818 KVASPS(ph)PSGSVLFTDEGVPK ddPTM_A549_MK2206_60min_R1 1 KVASPSPSGSVLFTDEGVPK 20 1 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 KVAS(0.375)PS(0.609)PS(0.015)GSVLFTDEGVPK 192.47 8.636399999999999e-45 10984000.0 2200.0 2588.8 2970.8 2533.8 4079.1 3018.7 2401.1 2534.0 4077.6 3691.6 3899.4 True False 2571.3062151640943 2720.5588623411745 3392.1041115848075 3154.5811137466058 3479.069793551095 3338.1368303491145 2837.348789658179 2893.2022600495334 3154.030110589174 2857.664996072452 2931.0713620348956 0.8772581413299216 0.9281789920162254 1.1572915472210952 1.076255308760732 1.186961818335174 1.1388794123496242 0.9680244658691457 0.9870801160026784 1.0760673218135124 0.9749557902570202 1.0 11.517212378039439 -5.592401065280159 7.427029829592911 1.0544070974098096 0.8896676462238893 0.4237453513140337 0.07242021484665978 0.14785231155497236 13.106927137467451 0.010172136032858813 0.04004194654831158 2.5562241569471875e-06 5.592401065280159 -0.16473945118592037 KVASPS(ph)PSGSVLFTDEGVPK ddPTM_A549_PD325901_60min_R1 1 KVASPSPSGSVLFTDEGVPK 20 1 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 KVAS(0.135)PS(0.864)PSGSVLFTDEGVPK 132.36 3.1066e-17 3443900.0 2683.6 2546.9 2264.3 2510.7 3539.7 3010.1 3163.4 3036.9 3292.0 3144.6 3007.4 True False 2956.0370964380945 2761.5362013463287 2417.9690143420194 2665.7802367865866 3291.083683302073 2985.5867435954733 3283.784918078901 2976.3266470980366 3153.648688238376 2946.0494193392046 2637.508865479335 1.1207685915781258 1.0470244242551403 0.916762421536954 1.010718967309372 1.2478000458603042 1.1319722116091844 1.2450327508120482 1.1284612863498853 1.1956921660110664 1.116981807302398 1.0 11.36496022783227 KVAT(ph)PK ddPTM_A549_MK2206_60min_R1 1 KVATPK 6 1 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 KVAT(1)PK 52.589 0.055192 72660000.0 10328.0 8334.0 7218.1 5116.5 10675.0 10804.0 11991.0 13937.0 11023.0 12165.0 11342.0 True False 12071.113904643078 8758.165002607899 8241.735117756269 6370.0427296884145 9104.721641086995 11947.272108885223 14169.609485981939 15912.612430272444 8526.308100113907 9416.918051040568 8525.468376724579 1.4158886493085217 1.0272942923017117 0.9667193347707521 0.74717803740605 1.0679438640513685 1.4013625505318308 1.6620329652112082 1.8664795559755452 1.000098495865825 1.104563131891937 1.0 13.057563380525092 -7.009876015537267 24.39874780142299 1.1557843399591194 1.0175235586875209 0.028967514798874605 0.3172713859434031 1270.210974909265 3138081.2611758006 0.0542990857196698 0.09846134582210506 9.775162471315619e-08 7.009876015537267 -0.13826078127159858 KVAT(ph)PK ddPTM_A549_PD325901_60min_R1 3 KVATPK 6 1 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 KVAT(1)PK;KVAT(1)PK;KVAT(1)PK 58.981 0.041777 126264000.0 18318.6 17535.9 15574.699999999999 16542.8 17794.4 14824.599999999999 12829.9 14203.900000000001 15648.099999999999 20735.8 22233.800000000003 True False 20178.290786559435 19013.711835246395 16631.692800279397 17564.611184575282 16544.582731347404 14703.873372680462 13318.148865290661 13920.59207175601 14990.464774733573 19426.538049206243 19499.183551670674 1.0348274702419822 0.9751029721250721 0.8529430350869438 0.900787006698563 0.8484756650198247 0.754076360875153 0.6830105901613287 0.7139064071512524 0.768773971228616 0.9962744336309298 1.0 14.251126097851767 -5.579613247206613 1.7007131005023537 0.8483088341720628 1.0548582401598872 0.3011831966924624 0.09942958608023172 0.6761803067888221 2.908014084893811 0.01729480767414516 0.1854424811097244 2.6326113709217446e-06 5.579613247206613 0.20654940598782434 KVAT(ph)PPNQNQK ddPTM_A549_MK2206_60min_R1 1 KVATPPNQNQK 11 1 H7C0H8;Q6NUQ4-2;Q6NUQ4 H7C0H8 TMEM214 Transmembrane protein 214 1 KVAT(1)PPNQNQK 49.3 0.017689 1145200000.0 1145.8 1152.0 1154.5 996.29 1094.3 1027.4 915.61 983.16 1626.6 1838.3 1642.5 True False 1339.1830278795549 1210.6318794101635 1318.2254600863953 1240.3810947251573 933.3299196104449 1136.118786067076 1081.9644851521914 1122.5259408012234 1258.1776971464471 1423.0267532452024 1234.6219193061283 1.0846907923295181 0.9805689178842317 1.0677159051471021 1.004664727985929 0.7559641579464157 0.9202159529984594 0.8763528884699113 0.9092062300595601 1.0190793452408147 1.1526012384787074 1.0 10.269853594770437 -6.525374801536508 24.995887621206364 0.9665750063405196 1.037656391770991 0.1469186731672779 0.096668027071327 134.60132189917837 1347923.6279680927 0.01298299952646887 0.02715096673543578 2.9828073080296515e-07 6.525374801536508 0.07108138543047127 KVAVAT(ph)PAK ddPTM_A549_MK2206_60min_R1 2 KVAVATPAK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVAVAT(1)PAK;KVAVAT(1)PAK 72.265 0.0016851 83529000.0 7871.4 8752.5 10922.6 9185.0 12559.8 9609.6 8984.2 9085.0 13404.1 12757.0 12875.9 True False 9199.899882746662 9197.964865049877 12471.588921905288 11435.325412330318 10712.270057866452 10626.481493663776 10616.512846631547 10372.826571645623 10368.092751949274 9875.18483987871 9678.45867323822 0.9505542352714886 0.9503543049145883 1.2885924652848202 1.1815234014430405 1.10681570480709 1.0979518384520173 1.09692185554164 1.071743644504821 1.071254535664646 1.0203261875968386 1.0 13.240561596466792 -9.84381458063489 0.5925190070017395 1.001846763821458 1.1008443397650356 0.10984002173735052 0.08934360029926171 1.228483030471991 0.8903339924170446 0.0549216705954206 0.023003993881610438 1.4327994936611235e-10 9.84381458063489 0.0989975759435775 KVAVAT(ph)PAK ddPTM_A549_PD325901_60min_R1 2 KVAVATPAK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVAVAT(1)PAK;KVAVAT(1)PAK 73.624 0.0013694 117118000.0 10786.5 10963.8 10931.4 10143.900000000001 11677.8 13073.1 12214.8 13243.5 10784.599999999999 13074.8 13631.1 True False 11881.537539398385 11887.757903459438 11673.270539848225 10770.465664531594 10857.591614222942 12966.637007972487 12679.640898195026 12979.348003175235 10331.360766456739 12249.254896640672 11954.561114662281 0.9938915720482341 0.9944119060028972 0.9764700207631166 0.9009503202356468 0.9082384129440013 1.0846602299827548 1.0606529822866884 1.0857235057551424 0.8642191601484487 1.0246511585956048 1.0 13.545273545205601 -8.770621325158348 24.999944274733775 0.9358812809193 0.9980126944473068 0.015288222340892332 0.07021145593132407 318.7620190257132 867899.5817474531 0.013573874667794325 0.014544513871926268 1.695815790436106e-09 8.770621325158348 0.062131413528006774 KVAVAT(ph)PAKK ddPTM_A549_MK2206_60min_R1 2 KVAVATPAKK 10 2 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVAVAT(1)PAKK;KVAVAT(1)PAKK 80.469 0.00041001 45507000.0 12428.6 13211.8 13430.5 13296.599999999999 17825.0 13844.8 13613.3 13324.7 20246.3 19783.2 19615.8 True False 14526.243829903842 13884.224187839587 15335.14685291497 16554.267596907055 15202.966112634713 15309.84754656555 16086.660396590594 15213.517030182333 15660.545376697464 15314.16137997089 14744.655491461283 0.9851870624116024 0.9416445298352358 1.0400478235517707 1.1227300364185335 1.031083169182138 1.0383319946289402 1.091016362227417 1.0317987449074393 1.0621167368587607 1.038624563920087 1.0 13.84790449380622 -5.772316664053282 24.595782657192682 1.0416347732487468 0.9634158007594912 0.4869746787754743 0.03350237179770792 114.11950330909482 258050.59377637986 0.005224629296778925 0.016480033406540355 1.6892088027759248e-06 5.772316664053282 -0.07821897248925558 KVAVAT(ph)PAKK ddPTM_A549_PD325901_60min_R1 2 KVAVATPAKK 10 2 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVAVAT(1)PAKK;KVAVAT(1)PAKK 44.203 0.020447 44002000.0 12666.2 13051.0 8754.3 10592.9 9445.8 8681.7 9262.0 9171.7 9301.900000000001 12296.0 14794.5 True False 13952.06329963638 14150.85357248849 9348.41944188241 11247.19937477861 8782.359594240961 8610.99911360846 9614.470478360872 8988.76324844054 8910.973491228599 11519.628461551514 12974.87029006252 1.0753142796596815 1.0906354557799824 0.7205019574679205 0.8668448410920041 0.6768745581192738 0.6636674526298458 0.7410070592940429 0.6927825132344524 0.6867870962882405 0.8878415124022028 1.0 13.663432495564672 -5.752163095540968 24.960136220741564 0.8014729880760593 1.082975043094372 0.5553120872473667 0.10486243217294876 151.32839801733226 407177.0966641099 0.01931821663412383 0.0727757972832356 1.7694443339942182e-06 5.752163095540968 0.2815020550183128 KVDAQS(ph)SAGEEDVLLSK ddPTM_A549_MK2206_60min_R1 1 KVDAQSSAGEEDVLLSK 17 1 K7EQL6;Q8NFA0 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 KVDAQS(0.667)S(0.333)AGEEDVLLSK 106.69 4.2876e-09 3917700.0 2386.3 2358.4 1908.8 1678.9 2970.7 2113.6 1783.1 2085.2 2295.2 2915.4 2626.4 True False 2789.0491005663985 2478.43248645914 2179.4965424104903 2090.2305753686855 2533.713965262495 2337.2597491058687 2107.0661891797517 2380.783485657178 1775.3408646812518 2256.8091151667645 1974.1923950475589 1.4127544547142323 1.2554158817937466 1.1039939916078876 1.058777543978094 1.2834179544093813 1.1839067737111628 1.0673053925572396 1.2059531237328185 0.8992744927671973 1.1431556117976016 1.0 10.947046879246363 -8.75609052754775 24.999611668590994 0.9524351727146173 1.1889131170471292 0.29604141590594 0.11448378377393319 74.74056807625149 349324.32492053293 0.017492587685386928 0.019553924087006545 1.7535149481435712e-09 8.75609052754775 0.2364779443325119 KVDAQSS(ph)AGEEDVLLSK ddPTM_A549_MK2206_60min_R1 1 KVDAQSSAGEEDVLLSK 17 1 K7EQL6;Q8NFA0 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 KVDAQS(0.109)S(0.891)AGEEDVLLSK 152.51 1.7909e-17 2884100.0 2425.9 2938.4 2023.8 2217.6 3383.6 2176.7 1929.9 1870.0 3104.3 3414.8 3685.3 True False 2835.332612439353 3087.952009078843 2310.80527165253 2760.9120995518456 2885.8769222278165 2407.0369492234795 2280.537848969773 2135.078226634818 2401.1810065484547 2643.3943083184004 2770.1383008942935 1.0235346775011243 1.114728462503821 0.8341840805950101 0.9966694076828333 1.041780809750964 0.8689230239683006 0.8232577587312299 0.7707478814128317 0.8668090707865643 0.9542463303962203 1.0 11.435742290190534 -7.262927141122036 24.98433638026522 0.908028227362745 0.9987930143496766 0.3012439674420623 0.08678962301269434 192.47179435886338 3232221.218428648 0.014877552016189562 0.02456532077131505 5.45849427166051e-08 7.262927141122036 0.09076478698693158 KVDLTLLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KVDLTLLSPK 10 1 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KVDLTLLS(1)PK;KVDLT(0.014)LLS(0.986)PK 89.01299999999999 0.00028933 27993000.0 2074.8599999999997 1982.66 2178.44 1896.08 3034.2 2153.7200000000003 2027.08 2789.5 3141.6000000000004 2829.4 2980.0 True False 2425.0456425433513 2083.568925374441 2487.375548956784 2360.619685118267 2587.8731993804354 2381.6252208763685 2395.374197051476 3184.920167485467 2430.032616104315 2190.2365748963584 2239.9837561840263 1.0826175126709807 0.9301714441554481 1.1104435655346927 1.053855715962759 1.1553089133954542 1.0632332552864752 1.0693712355897476 1.4218496713169064 1.0848438562983378 0.9777912758740644 1.0 11.12927255491027 -4.162979711795664 10.908953064656698 1.073411429498434 1.0824201744800397 0.0 0.12256935964795969 0.0 0.0 0.015827045895666594 0.0 6.871005373838304e-05 4.162979711795664 0.009008744981605643 KVDLTLLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KVDLTLLSPK 10 1 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KVDLT(0.004)LLS(0.996)PK;KVDLT(0.003)LLS(0.997)PK 97.86 0.00021188 52667000.0 4435.8 4182.9 4691.700000000001 4009.1000000000004 5124.1 4070.8999999999996 4569.2 3944.9 4194.0 4370.5 4763.7 True False 4886.119150536634 4535.407662888827 5010.106975484015 4256.733001673281 4764.200893185345 4037.7479401025917 4743.083406362181 3866.2158747858202 4017.740765027868 4094.545884125803 4177.795099582329 1.1695449475310837 1.0855983969492065 1.1992227613041373 1.018894632266394 1.1403625069265941 0.9664782125160377 1.1353078102936083 0.9254201756262151 0.9616892808911421 0.9800734087067005 1.0 12.0285260216661 -7.203019088462372 0.7146476649000569 0.9795354473671132 1.1448837993461407 0.49359207639167946 0.0650177559543135 0.4163475575080683 0.40703755492570304 0.011310222536093205 0.032707772899883907 6.265863238381366e-08 7.203019088462372 0.16534835197902753 KVDS(ph)LKK ddPTM_A549_MK2206_60min_R1 1 KVDSLKK 7 2 O95810 O95810 SDPR Serum deprivation-response protein 1 KVDS(1)LKK 60.518 0.022609999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVDT(ph)TPNQGK ddPTM_A549_MK2206_60min_R1 1 KVDTTPNQGK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.726)T(0.274)PNQGK 81.865 0.0033473 6899000.0 983.15 959.64 845.18 674.94 1265.8 1260.7 937.68 1155.0 1713.3 1734.3 1496.7 True False 1149.081684290263 1008.4815770461543 965.0392328764136 840.3003302992075 1079.602496795121 1394.106437215068 1108.044318473483 1318.7247870391518 1325.240285577897 1342.5204254763396 1125.0280831814205 1.0213804450470447 0.8964056916644346 0.8577912385506138 0.7469149818224599 0.9596227089213254 1.2391747886619255 0.9849036971060225 1.1721705500097246 1.1779619596964237 1.1933217006280248 1.0 10.135745299402965 -7.00868925494855 24.520917508405894 1.0949586882769422 0.8767632163581353 0.5840215436781244 0.09675390696949086 202.38071300719122 571117.9629272519 0.014608654936183262 0.026647574803190792 9.801910778612009e-08 7.00868925494855 -0.21819547191880695 KVDT(ph)TPNQGK ddPTM_A549_PD325901_60min_R1 3 KVDTTPNQGK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.743)T(0.257)PNQGK;KVDT(0.5)T(0.5)PNQGK;KVDT(0.574)T(0.426)PNQGK 96.866 0.00032567 532387000.0 11164.1 9923.6 11812.0 10050.95 12738.100000000002 11749.500000000002 11751.699999999999 11681.399999999998 11330.099999999999 11934.4 12431.6 True False 12297.471213423963 10759.896598877232 12613.633351326213 10671.774354136354 11843.419800059366 11653.815967534314 12198.917374276982 11448.40531311898 10853.93529848408 11180.85994726256 10902.59201040529 1.127940145030413 0.9869117902062308 1.1569389498651264 0.9788291026529613 1.086293955488398 1.0689032439636434 1.1189006579934841 1.050062710059477 0.9955371427386468 1.0255230991485047 1.0 13.412383545377846 -8.661436149513886 4.192542640289996 0.997849094966984 1.0719772141692827 0.23996434109636378 0.05181177215315016 0.1798327495188648 5.788600478189214 0.007770867700344385 0.008770509325492018 2.180538959026034e-09 8.661436149513886 0.07412811920229867 KVDT(ph)TPNQGKK ddPTM_A549_MK2206_60min_R1 1 KVDTTPNQGKK 11 2 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.5)T(0.5)PNQGKK 40.066 0.035963 62362000.0 1294.8 1656.9 1237.8 1162.9 2010.9 1451.6 1408.7 1445.2 1652.4 2036.5 2033.7 True False 1513.3305851793043 1741.2291328078993 1413.3386526591078 1447.8105522045653 1715.0992738231214 1605.2073485059038 1664.6425554918476 1650.0615257393786 1278.1340383405804 1576.4532355893236 1528.6761627353874 0.9899615249258391 1.1390438179477942 0.9245507237648708 0.9471008886629575 1.1219506888588828 1.050063700629421 1.0889438823414137 1.0794055444593225 0.8361051670050961 1.0312538875260833 1.0 10.578067100845267 -8.746017058610141 24.99850615577534 0.9226052113067936 1.0431572072184954 0.15763909866624448 0.079921318808303 218.78096427219506 354628.4920594902 0.014318741289831304 0.016207022778348394 1.7946631330517956e-09 8.746017058610141 0.12055199591170174 KVDTT(ph)PNQGK ddPTM_A549_MK2206_60min_R1 3 KVDTTPNQGK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.28)T(0.72)PNQGK;KVDT(0.302)T(0.698)PNQGK;KVDT(0.287)T(0.713)PNQGK 108.97 0.00013942 574271400.0 13850.2 15661.800000000001 15013.0 13932.1 20545.5 14965.4 15080.1 15164.3 21408.5 20896.8 21792.7 True False 16187.775155120802 16458.918723043484 17142.069148789116 17345.465125435727 17523.28416645928 16549.02869477147 17819.958970023865 17313.885963721044 16559.508932349512 16176.198366542107 16380.971142077735 0.9882060724433687 1.0047584224579655 1.0464623251033238 1.0588789257360023 1.0697341454590132 1.0102593155946686 1.087845086562042 1.0569511302810939 1.0108990968070977 0.9874993506941948 1.0 13.999733268904922 -8.881708096573092 5.821137799215116 1.0047534325178766 1.0415084051380858 0.28489077491300685 0.028613951661488824 0.21888769113658002 10.308252525736373 0.005069510109447755 0.005369564171494937 1.3130821676582775e-09 8.881708096573092 0.036754972620209214 KVDTT(ph)PNQGK ddPTM_A549_PD325901_60min_R1 1 KVDTTPNQGK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.191)T(0.809)PNQGK 125.03 1.0542e-05 495400000.0 8370.0 9072.8 9198.5 8785.0 9641.2 9194.7 8572.1 10159.0 8829.8 8798.6 9860.9 True False 9219.71623833167 9837.396696994374 9822.765525074003 9327.629497817416 8964.035372334372 9119.821411693072 8898.315956333105 9956.370775418676 8458.71421245662 8243.054894421535 8648.07181339535 1.0661007953299921 1.1375248621035767 1.1358330200102087 1.0785790982181103 1.0365357233099768 1.054549685580433 1.0289364089865836 1.1512821574858858 0.9781040670076968 0.953166795129237 1.0 13.078162787891817 -7.962279744829733 0.46083932088511786 0.9859082588636964 1.1134015064489164 0.44971278637448997 0.04670268905290013 0.6269350357983742 0.2925357997677466 0.01591143493591656 0.02903194271518865 1.090737526513274e-08 7.962279744829733 0.12749324758522007 KVDTT(ph)PNQGKK ddPTM_A549_PD325901_60min_R1 1 KVDTTPNQGKK 11 2 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.158)T(0.842)PNQGKK 58.486999999999995 0.0038946 131790000.0 2245.6 2069.8 2183.7 2276.4 2846.3 2636.7 2509.7 2496.2 2238.4 2548.2 2861.3 True False 2473.5716588766527 2244.2293099637313 2331.899013654845 2417.0080579204946 2646.3857072019355 2615.227589395098 2605.2080068605355 2446.411332768982 2144.3278322456795 2387.3062171214688 2509.3782392751273 0.9857308954712153 0.8943368021761485 0.9292736252978946 0.9631900126059453 1.0545981732775307 1.0421815047501755 1.038188650114815 0.974907367283007 0.8545255548502332 0.9513536778780225 1.0 11.293114229621562 -4.155075772481513 16.038264801327127 0.9547846649323488 0.9729073287154696 0.0 0.06208736924215837 0.0 0.0 0.01011456035662139 0.0 6.997199034103814e-05 4.155075772481513 0.018122663783120774 KVDWLTEK ddPTM_A549_MK2206_60min_R1 2 KVDWLTEK 8 1 I3L3H2;P38919;J3QL52;P60842;P60842-2;J3KT12;J3QS69;J3QL43;Q14240-2;J3KSZ0;Q14240;E7EQG2;J3KTN0 I3L3H2;P60842 EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 86.624 0.0027852 4184300.0 2653.5 3563.6000000000004 3149.3 2968.5 4826.7 4011.1 3483.4 3668.3 4950.7 4408.8 4501.1 False True 3101.3459281536007 3744.9720186337313 3595.9180956691926 3695.782633261027 4116.698823890824 4435.551939647308 4116.288690140063 4188.292758697595 3829.3743546433757 3412.8490179554174 3383.3526459597047 0.916648736529765 1.1068819631042188 1.0628268678889643 1.0923433115003298 1.2167513276533142 1.310993089929336 1.21663010654701 1.2379119757732393 1.1318283239603464 1.0087180897418235 1.0 11.7242378413572 -3.296101428244433 11.87270813126904 1.1044148618656968 1.1109291454840124 0.0 0.11427920668134531 0.0 0.0 0.016307237673885762 0.0 0.0005057065418818507 3.296101428244433 0.0065142836183156305 KVDWLTEK ddPTM_A549_PD325901_60min_R1 2 KVDWLTEK 8 1 I3L3H2;P38919;J3QL52;P60842;P60842-2;J3KT12;J3QS69;J3QL43;Q14240-2;J3KSZ0;Q14240;E7EQG2;J3KTN0 I3L3H2;P60842 EIF4A3;EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 84.17 0.0032467 6707100.0 5355.299999999999 4904.3 4882.1 4353.1 4873.1 4929.2 4230.6 4519.4 5110.0 5516.4 5996.4 False True 5898.966113636505 5317.60257264235 5213.428664452223 4621.9811003926 4530.83026728235 4889.058229471053 4391.5977980731495 4429.257021599287 4895.244470503673 5168.093562565283 5258.8808143114575 1.121715118088078 1.0111662082493083 0.9913570678887527 0.8788906354018128 0.8615578917385237 0.9296765608693824 0.8350822072487184 0.8422432791299546 0.9308529026141478 0.9827363929794516 1.0 12.360540085045956 -5.428064700223793 1.6009984726390112 0.934086547084599 1.1520386869757402 0.5408804523114485 0.056544920595592546 0.5762386957927684 1.7654884793744543 0.009768714750749257 0.17573933343261744 3.7319455596107603e-06 5.428064700223793 0.21795213989114115 KVEAPETNIDKT(ph)PK ddPTM_A549_MK2206_60min_R1 4 KVEAPETNIDKTPK 14 2 O75152;E9PBY7;E9PQ61 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 KVEAPETNIDKT(1)PK;KVEAPET(0.001)NIDKT(0.999)PK;KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK 169.28 5.8479e-23 225071400.0 13075.6 13324.000000000002 15385.099999999999 12171.8 18816.800000000003 14032.6 12791.199999999999 13851.8 19689.7 19085.2 19373.899999999998 True False 15282.441612272563 14002.134688594631 17566.938524014888 15153.891546412859 16048.873646464228 15517.520417913996 15115.195468025357 15815.335069358383 15230.014387989908 14773.840064752942 14562.825937561645 1.0494145626539988 0.9614984583781344 1.2062863759639388 1.040587287892159 1.10204391065814 1.0655569519573755 1.0379301059308135 1.086007285753939 1.0458144904902966 1.0144899161808307 1.0 13.830002719324373 -9.791460891865013 0.600513409244788 1.0009522250017622 1.0705868077080802 0.14564130143075615 0.05587395787071652 0.9474748095279041 0.715625516210543 0.029456766937779818 0.013050075977335419 1.616363772801716e-10 9.791460891865013 0.06963458270631806 KVEAPETNIDKT(ph)PK ddPTM_A549_PD325901_60min_R1 6 KVEAPETNIDKTPK 14 2 O75152;E9PBY7;E9PQ61 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 KVEAPETNIDKT(1)PK;KVEAPET(0.001)NIDKT(0.999)PK;KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK;KVEAPET(0.001)NIDKT(0.999)PK 183.45 1.7888e-26 370760800.0 45325.1 46219.8 48786.00000000001 45981.8 54116.80000000001 54260.700000000004 51065.899999999994 52810.2 51572.399999999994 51716.1 56080.49999999999 True False 49926.470785424935 50114.90475440222 52096.911334050186 48821.991353755366 50315.82266082486 53818.818849277726 53009.24076883267 51756.859132199555 49404.99137585199 48450.73662007518 49182.95402357974 1.0151173669131124 1.0189486530307974 1.059247301597082 0.9926608176147509 1.0230337656559219 1.094257551579261 1.0777970095781253 1.0523332760245716 1.0045145184277828 0.9851123744386416 1.0 15.585870768147169 -8.774341004642393 21.744939399031782 1.0021318227256173 1.042204405349078 0.33156617294206625 0.02822944939620482 45.42698068360537 76563.73580783376 0.005097767456318265 0.005450787180560102 1.6813533570832068e-09 8.774341004642393 0.040072582623460695 KVEEEGS(ph)PGDPDHEASTQGR ddPTM_A549_MK2206_60min_R1 4 KVEEEGSPGDPDHEASTQGR 20 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR 182.41 5.548099999999999e-44 275397000.0 6958.3 7959.4 6643.6 6879.68 8360.4 6803.5 6581.88 7929.7 11744.2 12639.6 12958.099999999999 True False 8132.69092589833 8364.499462653868 7585.762379064505 8565.201908840567 7130.596234954913 7523.441854202204 7777.722398765307 9053.759258687762 9084.157451633657 9784.305581416558 9740.246144633633 0.8349574338405213 0.8587564768332133 0.7788060246551227 0.8793619567365396 0.7320755686326776 0.7724077751718038 0.7985139475197376 0.9295205813331433 0.9326414668317754 1.0045234418236135 1.0 13.249742515609874 -8.428050694192736 2.2691305782941416 0.9690840036756162 0.8065293211724989 0.760627037512334 0.043176295205800116 0.1158852055628907 1.1706545574724612 0.007900172652815457 0.009576694152049257 3.732065917088114e-09 8.428050694192736 -0.16255468250311733 KVEEEGS(ph)PGDPDHEASTQGR ddPTM_A549_PD325901_60min_R1 4 KVEEEGSPGDPDHEASTQGR 20 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR 172.74 4.2315e-35 424896000.0 10485.699999999999 12263.899999999998 12365.1 12416.6 15159.5 14941.7 12342.2 15109.2 13541.9 14519.599999999999 16371.2 True False 11550.20054483564 13297.421893160785 13204.270043386694 13183.545181855396 14094.749017435886 14820.019749104838 12811.88917491099 14807.835153061891 12972.781036225775 13602.829978069562 14357.646185587317 0.8044633775994644 0.9261561206675493 0.9196681595790805 0.9182246874901735 0.9816893963848102 1.0322039948290178 0.8923391069332792 1.031355346249338 0.9035451123770054 0.9474275798580784 1.0 13.80953163047055 -4.138480673172165 0.8503056203886594 0.9602638515055927 5.699713133512611e-15 0.5003613728401746 0.04534275240026725 8.785414183154655 1.0905819068041571 0.0074209349498017075 12.358061238448677 7.269747500815581e-05 4.138480673172165 -0.960263851505587 KVEEEQEADEEDVS(ph)EEEAESK ddPTM_A549_MK2206_60min_R1 4 KVEEEQEADEEDVSEEEAESK 21 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK 343.97 3.7356999999999977e-231 5377080600.0 30253.510000000002 34391.4 30448.2 29838.300000000003 43506.7 34148.2 32183.199999999997 35954.0 47753.6 47224.0 45656.3 True False 35359.56286069506 36141.77536245374 34766.21260615206 37148.68483949218 37106.92206297697 37761.73985825939 38030.470853911596 41050.58960450709 36937.4858468293 36556.06560150762 34318.580660223066 1.0303329036471065 1.053125585824237 1.0130434282921212 1.0824656534397226 1.0812487389953667 1.1003293006819224 1.1081597817356938 1.1961622192635362 1.076311582129085 1.0651974789819296 1.0 15.066702266978966 -3.5903226251550353 14.83454908606337 1.0588639120875167 0.4829796936494464 0.0 0.052927367050183714 0.0 0.0 0.008069601565618329 0.0 0.0002568487017112311 3.5903226251550353 -0.5758842184380704 KVEEEQEADEEDVS(ph)EEEAESK ddPTM_A549_PD325901_60min_R1 5 KVEEEQEADEEDVSEEEAESK 21 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK 329.97 6.323499999999997e-207 7854332000.0 50926.700000000004 53840.100000000006 51256.3 54886.0 58769.3 46988.799999999996 52556.5 52622.3 59615.5 57970.50000000001 62847.3 True False 56096.74109374494 58377.3941788474 54734.8607471708 58276.18356484994 54641.547111078544 46606.138791886995 54556.566367520296 51572.70694510424 57110.06785348566 54310.2327366926 55117.480521859194 1.0177667876436656 1.0591448234956122 0.9930581047779089 1.0573085528054575 0.9913651094666437 0.8455781786579185 0.9898232983614619 0.935686944628227 1.0361516403282662 0.9853540514275422 1.0 15.750222321987621 -6.787860179627366 24.685956455562998 0.9944072730400779 1.0310027013841707 0.15309613780179976 0.05272849499379527 393.30834529898834 367482.4292595125 0.008422008433045 0.015919940867323838 1.6298206661848638e-07 6.787860179627366 0.036595428344092795 KVEEEQEADEEDVS(ph)EEEAESKEGTNK ddPTM_A549_MK2206_60min_R1 2 KVEEEQEADEEDVSEEEAESKEGTNK 26 2 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(1)EEEAESKEGTNK;KVEEEQEADEEDVS(1)EEEAESKEGTNK 307.57 9.177299999999997e-190 780210000.0 9979.599999999999 10218.3 11273.8 8601.4 13908.599999999999 8208.0 10067.1 7201.2 14396.400000000001 16449.4 17463.9 True False 11663.91250220527 10738.367824111874 12872.594362860104 10708.743386131515 11862.663364611013 9076.565111970556 11896.161759346905 8221.992152750083 11135.638386326757 12733.469115395537 13127.131650879943 0.8885347395311154 0.8180285007953018 0.9806098320037205 0.8157717672781687 0.9036752033956962 0.6914355209778164 0.9062270475934077 0.6263357732227012 0.8482918189961406 0.9700115344346366 1.0 13.680264093562236 -10.280195143626726 0.9925958879750587 0.9882316086419742 0.8319103415869179 0.2748488352501557 0.09536779536721827 0.447053151899487 0.8652654715154666 0.04029435905884707 0.017000680113768218 5.245716989633337e-11 10.280195143626726 -0.15632126705505633 KVEEEQEADEEDVS(ph)EEEAESKEGTNK ddPTM_A549_PD325901_60min_R1 3 KVEEEQEADEEDVSEEEAESKEGTNK 26 2 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(1)EEEAESKEGTNK;KVEEEQEADEEDVS(1)EEEAESKEGTNK;KVEEEQEADEEDVS(1)EEEAESKEGTNK 340.78 1.4796999999999993e-233 648856000.0 25559.3 21659.3 25052.6 24267.8 26750.9 27689.6 27563.0 30242.1 27496.3 26454.0 31299.5 True False 28154.061320237804 23484.60522431996 26752.82008952208 25766.766889827377 24872.009069595 27464.10507805763 28611.925048052344 29638.89759103151 26340.726131958934 24783.689925332124 27449.859923877906 1.0256540979922208 0.855545539738486 0.974606798129797 0.9386848224829574 0.9060887428412521 1.000518951798633 1.0423341003341 1.0797467700463352 0.9595941911909661 0.9028712712582351 1.0 14.744511166752881 -7.27883024651576 23.872588043138787 0.9950536648253964 0.9372542867811305 0.19800222114861954 0.05726895126592579 516.7512455374024 709347.2671108682 0.0075761492110588725 0.012131067674522647 5.2622291191660385e-08 7.27883024651576 -0.057799378044265826 KVEEEQEADEEDVS(ph)EEEAESKEGTNKDFPQNAIR ddPTM_A549_MK2206_60min_R1 4 KVEEEQEADEEDVSEEEAESKEGTNKDFPQNAIR 34 3 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(1)EEEAESKEGTNKDFPQNAIR;KVEEEQEADEEDVS(0.999)EEEAESKEGTNKDFPQNAIR;KVEEEQEADEEDVS(1)EEEAESKEGTNKDFPQNAIR;KVEEEQEADEEDVS(0.931)EEEAES(0.032)KEGT(0.037)NKDFPQNAIR 286.61 5.478699999999997e-185 714098000.0 19656.3 26223.100000000002 27182.699999999997 22316.85 34283.5 21865.369999999995 20554.1 19709.0 37167.4 41953.5 44258.4 True False 22973.80288960453 27557.743782083922 31037.615603196577 27784.479251841465 29240.442565077825 24179.14894034207 24288.51391342017 22502.811106281086 28749.04324414167 32476.175212028833 33267.81781030037 0.6905713810447582 0.8283604274624682 0.9329621732383879 0.8351758871072946 0.8789408049488721 0.7268029745207915 0.7300903850056547 0.6764138013078146 0.8641697934043755 0.9762039517354089 1.0 15.021839615848098 -9.719924397884617 1.0700824653432506 0.9759207419845991 0.797102584759767 0.47023816588281686 0.07855148239380148 0.29743750672717245 0.7006028652344565 0.02534799668949402 0.01657023890335583 1.9057924500172335e-10 9.719924397884617 -0.17881815722483207 KVEEEQEADEEDVS(ph)EEEAESKEGTNKDFPQNAIR ddPTM_A549_PD325901_60min_R1 2 KVEEEQEADEEDVSEEEAESKEGTNKDFPQNAIR 34 3 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(0.333)EEEAES(0.333)KEGT(0.333)NKDFPQNAIR;KVEEEQEADEEDVS(1)EEEAESKEGTNKDFPQNAIR 293.66 2.221999999999999e-201 607457400.0 11486.54 11997.6 12806.87 13807.13 15498.57 16886.01 18840.56 19563.99 17562.65 18354.52 17634.93 True False 12652.645084856184 13008.679857580863 13676.021212165513 14659.965061832629 14410.003910363885 16748.49593309877 19557.54782075002 19173.770871796758 16824.55289626055 17195.612474798032 15465.945407031815 0.8180970999098106 0.8411176630473737 0.8842667455652283 0.9478867716141856 0.9317247365823604 1.082927392559127 1.264555596572706 1.2397412745992964 1.0878450979537937 1.111837137804702 1.0 13.916807405175016 -6.861410780510411 1.6234407186607762 1.078855628794936 0.8537384279999697 0.6626262665460751 0.08392732246307277 0.24572769065469663 1.304898490445774 0.015592956553602055 0.036583486229316065 1.3759074414304918e-07 6.861410780510411 -0.22511720079496633 KVEGAQNQGK ddPTM_A549_MK2206_60min_R1 1 KVEGAQNQGK 10 1 Q9P2E9 Q9P2E9 RRBP1 Ribosome-binding protein 1 0 55.567 0.017100999999999998 790940.0 632.73 714.33 615.2 388.89 656.91 627.79 654.84 556.16 922.56 1086.3 1163.7 False True 739.519355236717 750.6863458498808 702.4446106930711 484.1680674579356 560.2794092034147 694.2223211067251 773.8159516137447 634.9973831685668 713.6016330255909 840.9040755318839 874.721173513876 0.8454343825541177 0.8582007256486885 0.8030497396916253 0.5535113155120797 0.6405234332589604 0.7936498419467062 0.8846429868677111 0.7259426230849019 0.8158046868340392 0.9613395685322854 1.0 9.772679405925949 -10.134003846184259 0.5166579577738433 1.0162522993237022 0.7528351702371914 0.4406239981089164 0.09297990602371055 0.7497360781596065 0.36414990446721396 0.09074716365565727 0.026129422554898578 7.345073632087781e-11 10.134003846184259 -0.2634171290865108 KVEGNFNPFAS(ph)PQK ddPTM_A549_MK2206_60min_R1 2 KVEGNFNPFASPQK 14 1 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 KVEGNFNPFAS(1)PQK;KVEGNFNPFAS(1)PQK 119.8 1.0419e-06 73770000.0 5854.1 7286.6 7163.1 7533.0 8344.4 6344.9 6300.7 6556.700000000001 10166.9 8947.0 9107.5 True False 6842.128960996419 7657.456816415019 8178.935290727466 9378.585338169214 7116.949813759839 7016.313106596248 7445.455632418183 7486.132304051611 7864.113383203124 6925.866486038635 6845.856395787254 0.9994555195763194 1.1185535269374334 1.194727849646474 1.3699652455375093 1.0395996355020547 1.0248992530596885 1.0875857163758074 1.0935275108397489 1.1487406291552473 1.011687374906172 1.0 12.74101531419089 KVEGNFNPFAS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 KVEGNFNPFASPQK 14 1 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 KVEGNFNPFAS(1)PQK;KVEGNFNPFAS(1)PQK 145.91 1.7227e-13 142877000.0 9684.7 10706.400000000001 9993.9 10343.9 11968.1 10812.1 10930.5 10868.599999999999 11035.400000000001 10452.4 11718.8 True False 10667.883614500679 11608.665902114075 10672.146152202757 10982.819210298638 11127.501943703584 10724.049842340331 11346.466158899111 10651.817246748236 10571.620514637232 9792.433680182252 10277.4618915938 1.037988146005797 1.129526533356363 1.0384028921510065 1.068631470118295 1.082709141719616 1.0434531361397512 1.1040144228780528 1.0364248837994359 1.0286217186836792 0.9528066154340824 1.0 13.327196402007313 -8.858022067393037 0.9513263522122705 1.0077184091003986 1.072910474809231 0.516162272062316 0.03215061543332559 0.2698801596537945 0.4961678286004148 0.005965237481300444 0.00594639541256345 1.3866853667552072e-09 8.858022067393037 0.06519206570883251 KVEGNFNPFAS(ph)PQKNR ddPTM_A549_PD325901_60min_R1 2 KVEGNFNPFASPQKNR 16 2 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 KVEGNFNPFAS(1)PQKNR;KVEGNFNPFAS(1)PQKNR 46.702 0.005668 8034300.0 2529.1000000000004 3152.6 3434.9 3705.3999999999996 3196.6 4808.8 3873.9 4207.4 4385.0 3246.7 3893.4 True False 2785.852370174983 3418.2806660506635 3668.012969731662 3934.2741424260275 2972.0818436713316 4769.638727152558 4021.323384379421 4123.480106358554 4200.713699248262 3041.702807914713 3414.5364822960823 0.8158801010383862 1.0010965423195781 1.0742345231189714 1.1522132397251328 0.8704202924997817 1.3968627226220895 1.177706961173046 1.2076251426037619 1.2302441988915345 0.8908098723459356 1.0 11.737474032993203 -4.500243537158959 0.8221595105691091 1.132200225795482 5.324876112689902e-13 0.26867183796744154 0.1448991632196539 6.394108230825715 1.280878361072068 0.020989638868844994 8.892207213905882 3.160504862543597e-05 4.500243537158959 -1.1322002257949495 KVELS(ph)ES(ph)EEDKGGK ddPTM_A549_MK2206_60min_R1 4 KVELSESEEDKGGK 14 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK 106.16 6.288e-06 159621000.0 21469.9 26098.0 22746.7 22819.9 33079.5 26340.6 25433.0 28159.199999999997 38713.399999999994 37430.1 37573.299999999996 True False 25093.49423134165 27426.2767264292 25972.524099564496 28410.776524424225 28213.54937014868 29127.944808524804 30053.846889915647 32150.852833933222 29944.876712596353 28974.61441366657 28242.81263967424 0.8884913323431333 0.9710887182639166 0.9196153524411891 1.0059471373086275 0.9989638684397725 1.0313400857111223 1.064123721434789 1.1383729108045402 1.0602653883888011 1.0259110798676023 1.0 14.785596150143329 -6.458536644573993 1.1714725466318519 1.0410583309355212 0.920294482561344 0.6419333149990015 0.0392500645337796 0.3169478119236853 0.8043157341344744 0.006960002910007088 0.027219024087878407 3.479071509620042e-07 6.458536644573993 -0.1207638483741772 KVELS(ph)ES(ph)EEDKGGK ddPTM_A549_PD325901_60min_R1 5 KVELSESEEDKGGK 14 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK 111.95 6.6764e-06 648860300.0 54459.2 56265.7 61927.700000000004 59485.8 64056.8 61565.0 62804.1 63610.6 65113.200000000004 67974.1 70096.3 True False 59987.857893255896 61007.40800349135 66130.48612351195 63160.10276394615 59557.67135196328 61063.63505181072 65194.14439322223 62341.83668144968 62376.71864125242 63682.203725467465 61474.89947705623 0.9758105894202344 0.9923954088979136 1.075731504826507 1.027412867710648 0.968812830254265 0.9933100431437224 1.0605002195661029 1.0141022955998003 1.0146697135232041 1.0359057805248637 1.0 15.907709850296857 KVELS(ph)ESEEDKGGK ddPTM_A549_MK2206_60min_R1 4 KVELSESEEDKGGK 14 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KVELS(0.995)ES(0.005)EEDKGGK;KVELS(1)ESEEDKGGK;KVELS(0.994)ES(0.006)EEDKGGK;KVELS(0.999)ES(0.001)EEDKGGK 201.96 3.3314e-32 875075000.0 32334.2 30982.1 33526.1 27836.9 41921.5 30338.7 31524.699999999997 31988.0 43655.200000000004 40072.3 46296.700000000004 True False 37791.422464708565 32558.95655475143 38280.60510818749 34656.941749645914 35754.90288307527 33549.121096800845 37252.32992767365 36522.396959141486 33767.36690302937 31019.939598578956 34799.95166608225 1.0859619239512321 0.9356034993141957 1.1000189159888305 0.9958905139349455 1.0274411650382769 0.9640565429146695 1.0704707375781102 1.0494956231430062 0.9703279828385714 0.8913788127129073 1.0 15.086797681854721 -8.768321811139938 24.998201727619268 0.9859882137122414 1.026009938428708 0.2104018241824832 0.055524933064850936 226.40040232945506 822323.9110395929 0.007539129502430287 0.00811318228084854 1.7048186544307126e-09 8.768321811139938 0.04002172471646659 KVELS(ph)ESEEDKGGK ddPTM_A549_PD325901_60min_R1 4 KVELSESEEDKGGK 14 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 KVELS(0.936)ES(0.064)EEDKGGK;KVELS(0.5)ES(0.5)EEDKGGK;KVELS(1)ESEEDKGGK;KVELS(0.998)ES(0.002)EEDKGGK 194.49 1.2174e-31 1297670000.0 30997.1 28651.5 35035.2 31772.000000000004 36312.0 33683.399999999994 33197.3 33464.8 37779.4 33943.2 35377.6 True False 34143.90277314104 31066.062457448003 37412.89935577244 33734.484280552606 33761.570389599394 33409.093558095665 34460.6414177596 32797.31831137227 36191.66319940245 31800.02055921726 31026.379477083756 1.100479764271558 1.0012790077680045 1.2058416091831081 1.0872839451173821 1.088156947688204 1.0767963945897006 1.1106884528119825 1.0570784881812116 1.1664803889262618 1.02493494552611 1.0 14.921207735610297 -11.05923501682001 1.3730681079305995 1.0001003480587987 1.105666814108359 0.2907680937503131 0.05130335733570426 0.3760350687471676 1.2666927671584292 0.03636695968151225 0.008105895238850871 8.724990910234727e-12 11.05923501682001 0.10556646604956033 KVEPVPVTKQPT(ph)PPSEAAASK ddPTM_A549_MK2206_60min_R1 2 KVEPVPVTKQPTPPSEAAASK 21 2 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 KVEPVPVT(0.001)KQPT(0.944)PPS(0.055)EAAASK;KVEPVPVT(0.012)KQPT(0.946)PPS(0.042)EAAASK 117.54 4.1971e-15 38583000.0 6157.4 7105.0 6075.6 6157.1 8667.3 6263.8 6184.8 5097.7 8068.099999999999 9453.0 10194.5 True False 7196.618586023364 7466.614152091327 6937.211438112516 7665.589776402727 7392.35165150288 6926.6311584260675 7308.498102652077 5820.314586051505 6240.688232108233 7317.560734606371 7662.92429611344 0.9391478119747859 0.974381823904788 0.9052955725572027 1.0003478411356144 0.964690680195315 0.9039148621028642 0.9537479192322017 0.7595422271108057 0.8144003504345526 0.9549305789589708 1.0 12.903679337700625 -7.449298080769896 2.3489539371720958 0.8991153862900124 0.9569320625397717 0.16111606546231394 0.06632239523354248 0.6081514899320157 6.617252296202886 0.01321977747252833 0.022072160899652308 3.553873125068858e-08 7.449298080769896 0.05781667624975928 KVEPVPVTKQPT(ph)PPSEAAASK ddPTM_A549_PD325901_60min_R1 2 KVEPVPVTKQPTPPSEAAASK 21 2 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 KVEPVPVT(0.003)KQPT(0.965)PPS(0.032)EAAASK;KVEPVPVT(0.053)KQPT(0.938)PPS(0.009)EAAASK 121.72 2.3658000000000003e-15 56457000.0 6714.0 7029.1 8722.9 7319.6 9323.5 9118.3 8430.0 8904.5 9284.2 9719.3 9617.599999999999 True False 7395.600337414428 7621.466925628599 9314.888449058864 7771.715067982279 8668.649524328872 9044.043587962728 8750.808263073002 8726.892762054886 8894.017360675187 9105.621739293885 8434.696170989571 0.876806963462534 0.9035852354518701 1.1043537621540702 0.9213983420899545 1.0277370220096325 1.0722429598672392 1.0374775908551006 1.0346422188946534 1.054456163016922 1.0795435371592763 1.0 13.04212038631053 -5.646453319771293 6.997448836252075 1.0276819370323311 0.8841520207519319 0.5948857815750772 0.046329163757853474 0.09839892449381532 5.546151202942137 0.005746189161631426 0.02262111154199939 2.2570785849999226e-06 5.646453319771293 -0.14352991628039924 KVEQNSRPVS(ph)CSGR ddPTM_A549_MK2206_60min_R1 5 KVEQNSRPVSCSGR 14 2 O00401 O00401 WASL Neural Wiskott-Aldrich syndrome protein 1 KVEQNS(0.006)RPVS(0.949)CS(0.045)GR;KVEQNSRPVS(0.953)CS(0.047)GR;KVEQNS(0.001)RPVS(0.931)CS(0.068)GR;KVEQNS(0.003)RPVS(0.987)CS(0.011)GR;KVEQNS(0.001)RPVS(0.993)CS(0.006)GR 75.23899999999999 0.00017865 88956000.0 5362.35 5160.78 4874.719999999999 3801.6800000000003 5759.04 4948.25 3785.32 4202.51 5822.55 5950.660000000001 6070.99 True False 6267.383583129627 5423.441658526376 5566.028596615291 4733.0917706639 4911.8928449541545 5471.870530617484 4473.06364602428 4798.228662147105 4503.7517217017385 4606.401773087141 4563.3956321998885 1.3734035109527185 1.1884662421679804 1.2197120401616504 1.037186374388978 1.0763679594850875 1.1990787062176427 0.9802050943077969 1.0514601513597035 0.9869299277763043 1.0094241534930253 1.0 12.155892021038202 -2.000000000006352 0.30318270481721293 0.9890671247805992 4.1847084028185035 0.7570183346022241 0.059241018203023924 14.863044426919252 0.18588223583300553 0.01818693839342125 26.293317955388506 0.009999999999853744 2.000000000006352 3.1956412780379044 KVEQNSRPVS(ph)CSGR ddPTM_A549_PD325901_60min_R1 3 KVEQNSRPVSCSGR 14 2 O00401 O00401 WASL Neural Wiskott-Aldrich syndrome protein 1 KVEQNSRPVS(0.983)CS(0.017)GR;KVEQNS(0.01)RPVS(0.981)CS(0.01)GR;KVEQNS(0.002)RPVS(0.676)CS(0.323)GR 92.47399999999999 1.2572000000000001e-05 162134000.0 5481.299999999999 5852.3 6200.299999999999 5060.7 4902.1 5493.3 5147.2 5683.4 3599.8999999999996 5587.4 6131.6 True False 6037.757540880211 6345.493859648636 6621.089643432771 5373.287945316401 4557.793407326923 5448.564386097811 5343.079512655912 5570.0401284589525 3448.6087219894657 5234.610610448351 5377.452071414868 1.1227915117970748 1.1800186734121956 1.2312689272729653 0.9992256321315066 0.847574901049321 1.013224165225192 0.9936080213635614 1.0358139978723069 0.6413090579312403 0.9734369625113303 1.0 12.39270704579992 -6.664546761731084 0.6921197192555014 0.8507511815178448 1.2124858040313213 0.33198791265418093 0.12442554124117111 0.7168906200533283 0.5656350897950055 0.0285879519341052 0.1416943271431759 2.1649767575077482e-07 6.664546761731084 0.36173462251347654 KVESLQEEIAFLK ddPTM_A549_MK2206_60min_R1 2 KVESLQEEIAFLK 13 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 144.8 1.9776e-12 20504000.0 7195.7 8388.6 6761.0 6867.200000000001 11103.6 9127.5 7898.900000000001 9106.9 12133.9 9478.7 10674.3 False True 8410.158242025576 8815.543909392445 7719.8114643950785 8549.664308280326 9470.275148849976 10093.365991655857 9334.027884982299 10397.830963711567 9385.591023856681 7337.455086756945 8023.576714307096 1.0481806981453987 1.0987050069170732 0.9621409178564512 1.0655677153351255 1.1803059266527889 1.257963418441311 1.163325062791323 1.2959097088423 1.1697515158197382 0.9144868115579047 1.0 12.970029782900587 -6.538929903626319 20.239319228499728 1.1242799444098595 1.0377911661756016 0.15517100900416225 0.1057695628643673 43.06238932554273 54298.04011001503 0.015627514764795146 0.032555122211609305 2.891146484035017e-07 6.538929903626319 -0.08648877823425782 KVESLQEEIAFLK ddPTM_A549_PD325901_60min_R1 2 KVESLQEEIAFLK 13 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 178.23 2.9734e-22 35891000.0 8036.299999999999 8032.0 8492.2 8681.2 9793.0 8667.6 9068.8 10557.1 9991.400000000001 8719.8 10018.5 False True 8852.139259988624 8708.88482830645 9068.53175974707 9217.418007564314 9105.173464015941 8597.01393933362 9413.918146637774 10346.530358615271 9571.496204029436 8169.230339869627 8786.28801250406 1.0074947745157967 0.991190456756317 1.032123206847003 1.0490685024718858 1.0362935350011364 0.9784580162975448 1.0714329115139993 1.177576963547152 1.0893674541977136 0.9297703795099503 1.0 13.10103807608013 -7.787927528792316 24.999407854777544 1.0575732013144732 1.0178436656603815 0.08860772953375007 0.0596505931693905 401.5733922435818 379001.97148959764 0.008837927352700344 0.012213405939473128 1.6295679377834742e-08 7.787927528792316 -0.03972953565409165 KVESLQEEIAFLKK ddPTM_A549_PD325901_60min_R1 2 KVESLQEEIAFLKK 14 2 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 106.52 6.373400000000001e-06 6352300.0 2154.8199999999997 2191.0 2397.2 3159.2 3074.7 3539.8999999999996 2872.6 3548.2 3319.7 2965.9 2467.8 False True 2373.575740105358 2375.6432593151676 2559.8884075346414 3354.3366089362275 2858.743679139162 3511.0722280501036 2981.918364947034 3477.4283674909475 3180.1845535677217 2778.632567836339 2164.2762446731076 1.096706460622758 1.0976617542064206 1.1827918981392724 1.5498652804567776 1.3208774462942676 1.622284695260986 1.3777900913926187 1.6067396091649004 1.4693986321732497 1.2838622494126317 1.0 11.079668938810451 -3.811504788311284 11.47459131191651 1.2907549685389166 1.2682585362119752 0.0 0.21072908935623139 0.0 0.0 0.03322696198312636 0.0 0.00015434594058280182 3.811504788311284 -0.02249643232694143 KVEVVS(ph)PATPVPSETAPASVFPQNGAAR ddPTM_A549_MK2206_60min_R1 2 KVEVVSPATPVPSETAPASVFPQNGAAR 28 1 Q92993-4;E9PRM3;Q92993-2;Q92993-3;E9PRL6;Q92993 Q92993-4 KAT5 Histone acetyltransferase KAT5 1 KVEVVS(0.548)PAT(0.447)PVPS(0.004)ET(0.001)APASVFPQNGAAR;KVEVVS(0.945)PAT(0.055)PVPSETAPASVFPQNGAAR 89.79299999999999 8.179700000000001e-10 14815500.0 2031.6599999999999 2143.81 2183.62 1954.32 2834.8199999999997 2197.43 2320.96 2497.42 3591.8 2850.05 3632.2 True False 2374.554538681948 2252.920772047137 2493.290150847859 2433.1284877327594 2417.821733263347 2429.9605840640193 2742.648389007143 2851.4369330279833 2778.2630349259834 2206.221725554309 2730.2244963797384 0.8697286768288078 0.8251778471090917 0.9132179987960503 0.8911825716013733 0.8855761628647624 0.890022262742911 1.004550502218363 1.0443965090815688 1.017595087367337 0.8080733758266935 1.0 11.414803868223938 -7.7517347169262285 4.679329177769058 1.011936139752956 0.8780129763839073 0.28027740740267826 0.06545214655963215 0.045588693947915156 2.5069883832708384 0.0036657099061022675 0.005330309355351906 1.771190536399851e-08 7.7517347169262285 -0.13392316336904875 KVEVVS(ph)PATPVPSETAPASVFPQNGAAR ddPTM_A549_PD325901_60min_R1 2 KVEVVSPATPVPSETAPASVFPQNGAAR 28 1 Q92993-4;E9PRM3;Q92993-2;Q92993-3;E9PRL6;Q92993 Q92993-4 KAT5 Histone acetyltransferase KAT5 1 KVEVVS(0.758)PAT(0.241)PVPSETAPASVFPQNGAAR;KVEVVS(0.932)PAT(0.068)PVPSETAPASVFPQNGAAR 93.43700000000001 5.3236e-10 18534900.0 1917.48 2094.69 2052.6 1902.97 3024.3 2209.6 2152.2 2673.3 1794.36 2744.0 3174.5 True False 2112.1411580258314 2271.216877615194 2191.901779286504 2020.5121349415606 2811.8836012686006 2191.6057501905448 2234.10314872903 2619.9789343367192 1718.9492892549847 2570.7433717060317 2784.056624813508 0.7586559623827029 0.8157940673233731 0.7873050281200118 0.7257439079842373 1.0099951187081033 0.7871986979924847 0.8024632576856023 0.941065246656835 0.6174261234252482 0.9233804186286028 1.0 11.442972839062401 -11.161117432015796 1.5617754101292016 0.999700138907155 0.7835950269862916 0.23248975416248252 0.1016115037789447 0.3623251191777111 1.5892241924586898 0.07965879183178178 0.017016202378436675 6.900531901547807e-12 11.161117432015796 -0.21610511192086346 KVFAENK ddPTM_A549_MK2206_60min_R1 1 KVFAENK 7 1 O95994;B5MC07;H7C3Z9;C9J3E2 O95994 AGR2 Anterior gradient protein 2 homolog 0 57.598 0.035139 2874700.0 3303.7 3497.0 4120.1 3479.3 4126.8 3463.6 3235.6 3039.6 4871.4 5205.6 4334.8 False True 3861.2837922898257 3674.9823631053314 4704.392133479391 4331.7286561917135 3519.753186738905 3830.115853048393 3823.4666377152175 3470.4726083845962 3768.035678027297 4029.6513445537844 3258.349525606213 1.1850428451414945 1.1278662200678438 1.4437960373831116 1.3294241830565428 1.0802257888782076 1.1754772847261694 1.1734366149696187 1.0651013898636053 1.1564246402712912 1.236715494420161 1.0 11.669925655809639 -10.057549445070244 0.17934135513509913 0.8797159935379489 1.2977231458961243 0.02234654480294529 0.11701032941203722 5.131682577691095 0.3677646261182138 0.5936750671373114 0.21989568657090738 8.758919903552953e-11 10.057549445070244 0.4180071523581753 KVFAENK ddPTM_A549_PD325901_60min_R1 1 KVFAENK 7 1 O95994;B5MC07;H7C3Z9;C9J3E2 O95994 AGR2 Anterior gradient protein 2 homolog 0 81.548 0.015522999999999999 5449300.0 2243.9 2007.5 1801.5 1950.6 2602.3 2026.1 2260.2 2283.9 1950.2 2305.7 2602.9 False True 2471.6990761281277 2176.679070321864 1923.7606232995404 2071.0841318659805 2419.5234254476327 2009.6001133513132 2346.2131478288966 2238.34582281511 1868.2398760031842 2160.117708506777 2282.759801142569 1.0827679175404221 0.9535296132481353 0.8427345804568042 0.9072720357303294 1.0599115264937689 0.8803379629978881 1.0277967689174166 0.9805437355672599 0.8184128155174676 0.9462746397696302 1.0 11.156563347496071 KVFDPVPVGVTK ddPTM_A549_MK2206_60min_R1 1 KVFDPVPVGVTK 12 1 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 61.038000000000004 0.008276899999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVFS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 KVFSPIR 7 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 KVFS(1)PIR;KVFS(1)PIR 63.283 0.011144 11971600.0 3461.8 3724.8 3550.8 2959.5 4356.9 3463.8 3619.5 3067.1 4892.2 4281.700000000001 4228.4 True False 4046.06720711594 3914.376410092862 4054.3568329794484 3684.577632857003 3716.0057815505324 3830.3370169156456 4277.116298433124 3501.8708175998136 3784.124511238072 3314.4609962302015 3178.371582096823 1.2730000576102194 1.231566640018372 1.275608193773468 1.1592658497236588 1.1691539788746232 1.2051256179394576 1.345694229877125 1.101781439692326 1.1905859379543104 1.0428173391997162 1.0 11.63407208408443 -11.311129508899931 0.29569490985584845 0.8456699115471027 1.243244037170066 0.6170252549091255 0.060896001218716016 2.4705326497202025 0.2054451558599226 0.3414104362731059 0.028025698369064943 4.885066623626802e-12 11.311129508899931 0.39757412562296324 KVFS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 KVFSPIR 7 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 KVFS(1)PIR;KVFS(1)PIR 79.148 0.0068812 24036000.0 6484.8 6051.8 6212.3 6094.3 7277.2 5484.1 5984.4 6771.5 6861.4 7096.799999999999 6620.1 True False 7143.132122142552 6561.806424793947 6633.904035594631 6470.731069840484 6766.074576977103 5439.43930784756 6212.139616789332 6636.437120361015 6573.039219161236 6648.7068368525315 5805.869668271512 1.2303293959867967 1.1302021574224363 1.1426202127561083 1.1145153852147893 1.1653851986986572 0.9368862235357337 1.0699757265889112 1.1430565099710162 1.1321368881361957 1.1451698396171446 1.0 12.503296470982706 -14.999999998279959 0.017450994330408073 2.7385336093434785e-16 1.9352253512620046 0.09890073109176001 0.07326687893566335 2878.4335533435915 3.9048535198674643 279.1934440188974 167.28058065338396 1.0000000039605407e-15 14.999999998279959 1.9352253512620043 KVFS(ph)PVIR ddPTM_A549_MK2206_60min_R1 2 KVFSPVIR 8 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 KVFS(1)PVIR;KVFS(1)PVIR 97.734 0.0010257 100205000.0 4055.2000000000003 4733.4 4616.5 4315.4 6540.5 5201.4 5311.0 5104.7 7291.3 5921.0 6403.4 True False 4739.618619878836 4974.30984201395 5271.189117790251 5372.6731937256645 5578.401114147959 5751.808695590114 6275.939953302483 5828.3068574881045 5639.83219181353 4583.441987686909 4813.259055150603 0.9847005044964358 1.0334598210937782 1.0951392928144235 1.116223567475854 1.1589654847641304 1.1949925465647195 1.303885762514005 1.2108857617483342 1.1717283709835693 0.9522533350417177 1.0 12.232798357564585 -5.659905203015505 1.801490249682449 1.1234348682506767 0.9805372140462718 0.2203539152380105 0.09221984904387905 0.6522822957198158 3.4897413042641605 0.0146914644498708 0.1213159495928163 2.1882392165732995e-06 5.659905203015505 -0.14289765420440492 KVFS(ph)PVIR ddPTM_A549_PD325901_60min_R1 2 KVFSPVIR 8 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 KVFS(1)PVIR;KVFS(1)PVIR 79.65899999999999 0.0016954000000000001 186613000.0 5103.8 5344.7 5887.1 5964.1 5783.700000000001 6930.2 5826.1 6000.3 6490.9 6423.700000000001 6012.3 True False 5621.93401878102 5795.116626226282 6286.634008008171 6332.488911546141 5377.472864681816 6873.762748900484 6047.815423664251 5880.619309355711 6218.110045712779 6018.1064857245 5272.825215109862 1.0662090604996253 1.0990534276804276 1.1922705099332949 1.200966968030667 1.0198465993661376 1.3036204441601742 1.1469781714617753 1.1152691525795597 1.17927482744812 1.1413438223741899 1.0 12.364360459367026 -10.801041687945627 0.9091431841170716 0.9944275133709303 1.1503329120734502 0.012656086861288274 0.0826315051297216 0.5249158843688017 0.724092964557513 0.056711024991226655 0.012273449307671035 1.5810962624890764e-11 10.801041687945627 0.15590539870251996 KVGDDIAK ddPTM_A549_MK2206_60min_R1 2 KVGDDIAK 8 1 P30050 P30050 RPL12 60S ribosomal protein L12 0 ; 64.297 0.009584200000000001 12068800.0 10265.3 12457.9 11888.0 10108.4 14989.8 11718.7 11385.3 10607.0 16641.1 16377.2 15989.800000000001 False True 11997.8316775109 13091.953898006836 13573.897158516287 12584.958453783314 12784.820276867995 12958.76505575651 13453.861636289725 12110.574732575144 12871.917420376085 12677.579145540627 12019.091363970252 0.9982311735708173 1.0892631981526253 1.1293613425060476 1.047080687938638 1.0637093844875143 1.0781817579491182 1.1193742712215748 1.007611504550097 1.0709559508768156 1.0547868188725422 1.0 13.553040212849472 -10.93488437805341 0.46074294500033314 0.9773958134580336 1.0728022933072892 0.061275177521388446 0.041324298608670595 1.9411221341252018 0.4742635155547441 0.0876824092981121 0.009442150691631781 1.161757866738115e-11 10.93488437805341 0.09540647984925554 KVGDDIAK ddPTM_A549_PD325901_60min_R1 3 KVGDDIAK 8 1 P30050 P30050 RPL12 60S ribosomal protein L12 0 ;; 79.97399999999999 0.0040358 17584300.0 11764.3 12690.099999999999 11120.8 12526.2 15029.7 14771.6 13249.6 14959.300000000001 15338.900000000001 13869.5 14724.4 False True 12958.60307558007 13759.539262909813 11875.52436280295 13299.91492493573 13974.0657216502 14651.304987108366 13753.820778459327 14660.925026156166 14694.259375461617 12993.777403016322 12913.392145661994 1.0035010885914484 1.0655247751871353 0.9196285707773774 1.0299319322850102 1.082137486728808 1.134582209061946 1.0650819415469899 1.1353271751358702 1.1379085533616256 1.0062249528588298 1.0 13.656580403347288 -6.613509103946577 4.599677238243743 1.0780930809222553 0.999072854601775 0.3197593130655989 0.05423256735653102 0.23462521432350256 8.812373661033584 0.009034840726495134 0.01932911994578874 2.4349547564060157e-07 6.613509103946577 -0.07902022632048034 KVGIVGK ddPTM_A549_PD325901_60min_R1 2 KVGIVGK 7 1 G5E9R3;Q6P4E4;E9PEL3;P61513 G5E9R3 RPL37A 60S ribosomal protein L37a 0 ; 79.116 0.015847999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVGLIAAR ddPTM_A549_MK2206_60min_R1 1 KVGLIAAR 8 1 P62917;E9PKU4;E9PP36 P62917 RPL8 60S ribosomal protein L8 0 69.825 0.0069559 4658600.0 1516.4 1528.1 1328.2 1229.9 1602.0 1200.4 1406.4 1255.0 1797.6 1911.1 1898.8 False True 1772.33124757947 1605.873762957179 1516.558731993719 1531.2255552123088 1366.347922156568 1327.42553123897 1661.9246752635297 1432.9000932763074 1390.4464701773343 1479.381182683407 1427.275555785983 1.2417582858437375 1.125132253857486 1.062554967641528 1.0728310654553892 0.9573119336469944 0.9300415227163148 1.1644035158637103 1.0039407509415568 0.9741962331945303 1.0365070547773307 1.0 10.479048179102815 -2.0000011333973537 0.5243541334388955 0.9941993025504221 10.583205130320609 0.5545859907982467 0.060261354589523836 50.06910569944945 0.4461947528401847 0.010457094019286885 538.0719451706794 0.009999973902595542 2.0000011333973537 9.589005827770187 KVGLIAAR ddPTM_A549_PD325901_60min_R1 2 KVGLIAAR 8 1 P62917;E9PKU4;E9PP36 P62917 RPL8 60S ribosomal protein L8 0 ; 81.548 0.0037398 17061700.0 4626.9 5367.3 5369.2 5591.4 6242.0 6334.6 5257.8 6235.1 6329.0 5861.5 6128.5 False True 5096.619481856244 5819.621207540989 5733.586199622475 5936.768079009248 5803.583453730983 6283.013117829933 5457.888456178554 6110.736039158678 6063.014139690363 5491.4038896701495 5374.73335176235 0.948255317668008 1.0827739399635077 1.0667666327562946 1.1045697880179692 1.0797900237837874 1.1689906655126925 1.0154714846251747 1.1369375258690733 1.1280585924699555 1.0217072234605915 1.0 12.391977466967436 -5.259424657988476 24.014079382403185 1.0756793913627358 0.9482552441265466 0.35513038749837555 0.05085613747717012 102.71427849145553 1224111.5815669778 0.007862028745544739 0.07068228317097947 5.502693737280625e-06 5.259424657988476 -0.12742414723618922 KVHGS(ph)LAR ddPTM_A549_PD325901_60min_R1 2 KVHGSLAR 8 1 P62861 P62861 FAU 40S ribosomal protein S30 1 KVHGS(1)LAR;KVHGS(1)LAR 104.79 0.00085078 32794000.0 7584.0 6637.5 5973.9 5935.200000000001 7869.5 6306.5 6687.4 6512.8 6700.8 6472.7 7130.5 True False 8353.922096954278 7196.865419308275 6379.324777978974 6301.8038241828 7316.773468301181 6255.141954913408 6941.892666485697 6382.897094807239 6419.188678659689 6064.0126173621065 6253.49370396369 1.3358807879920407 1.1508551475388298 1.020121723946972 1.0077253008487863 1.1700297169346388 1.0002635728166918 1.110082298809332 1.0206929753141878 1.026496384667498 0.9696999636408872 1.0 12.61044670502056 -5.372821282799048 2.128748109369287 1.0292468434709978 1.381173800338528 0.724492676442505 0.05463889835202846 0.1848470370144017 1.103751601188898 0.007168127558812008 0.11268756881663743 4.23817335903703e-06 5.372821282799048 0.3519269568675303 KVHS(ph)PQQVDFR ddPTM_A549_MK2206_60min_R1 1 KVHSPQQVDFR 11 1 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746;Q15746-11;Q15746-7 Q15746-4 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form 1 KVHS(1)PQQVDFR 40.552 0.021765 3348400.0 439.96 539.57 456.5 395.77 917.15 541.92 614.8 641.27 975.83 739.64 841.63 True False 514.2144920107248 567.0318083101928 521.2385643390552 492.73366776679063 782.2384499412582 599.2656147026174 726.501201899899 732.1719863070106 754.8060630803004 572.5548102977107 632.6300431936784 0.8128202217758083 0.8963086948063217 0.823923191677255 0.7788654254852408 1.2364864083790872 0.947260758716692 1.1483823914405566 1.1573462155082281 1.1931239611540518 0.9050389188083883 1.0 9.305218259916067 -6.750311488723747 24.999982821452303 1.0999547712728548 0.8325702760791183 0.5962317952300662 0.10075656539560889 103.35462878643487 232195.46772417787 0.013327030625309067 0.027542234272081963 1.7770044332368083e-07 6.750311488723747 -0.2673844951937365 KVHS(ph)PQQVDFR ddPTM_A549_PD325901_60min_R1 2 KVHSPQQVDFR 11 1 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746;Q15746-11;Q15746-7 Q15746-4 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form 1 KVHS(1)PQQVDFR;KVHS(1)PQQVDFR 98.531 6.0799e-05 3994800.0 1463.1799999999998 1149.69 1144.72 1334.54 1509.42 1055.33 1255.3899999999999 1592.77 1387.25 1466.1100000000001 1627.54 True False 1611.7209564638135 1246.5784111374057 1222.4075829605604 1416.9715048397559 1403.4035464163107 1046.7357423735466 1303.1645534257675 1561.0009528461078 1328.9487067918242 1373.539564392103 1427.362897826108 1.1291599066491675 0.8733437117049634 0.8564098063795148 0.9927198661236197 0.9832142537498433 0.7333354005262 0.9129875488640652 1.0936258433111383 0.9310517380098853 0.9622917665045247 1.0 10.479136462036179 -10.9783035418313 0.4352203437122113 1.0210861111627063 0.9344052238642343 0.011627223007526166 0.10452061027389346 7.02891632811217 1.4779892584378136 0.27825823355838825 0.028113448724291227 1.0512268820524985e-11 10.9783035418313 -0.08668088729847201 KVIDDTNITR ddPTM_A549_MK2206_60min_R1 2 KVIDDTNITR 10 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 113.61 0.00010414 43702000.0 4447.1 4989.4 5517.299999999999 4739.4 5704.200000000001 4781.700000000001 4502.2 5019.5 7658.0 6800.2 7008.4 False True 5197.661758843751 5243.33914854954 6299.736103018333 5900.55321275975 4865.119736308047 5287.6963201644285 5320.19146257926 5731.02949657405 5923.475227313102 5264.030097055986 5268.020858000045 0.9866441115073706 0.995314804152109 1.1958449430684237 1.1200702069732957 0.9235194520765516 1.0037348869138405 1.0099032646197648 1.0878904338184003 1.124421369425233 0.9992424553638585 1.0 12.36304534241932 -12.625530018485543 14.823180156622712 1.0551954830447206 1.0521269091934067 0.0 0.07714848601981009 0.0 0.0 0.0 0.010590893260438801 2.3684814164128047e-13 12.625530018485543 -0.0030685738513138716 KVIDDTNITR ddPTM_A549_PD325901_60min_R1 2 KVIDDTNITR 10 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 128.28 1.4905000000000002e-06 89674000.0 6361.9 6571.8 6778.8 7069.4 8276.3 7352.4 6470.700000000001 6887.4 7942.200000000001 7424.8 7624.5 False True 7007.755404616749 7125.628649734102 7238.850132235866 7506.060782227703 7695.001239684986 7292.524492080448 6716.946029402903 6750.025403939227 7608.41695374448 6955.996860875701 6686.734835687694 1.0480085687286027 1.0656364914762273 1.082568743955792 1.1225300489212156 1.1507860605771423 1.090595734880887 1.0045180786224646 1.0094650931742868 1.1378373960842125 1.0402680877595043 1.0 12.707086192645875 -7.554476623685492 24.972318061951437 1.0571217678331872 1.096035382359762 0.2255301028237907 0.04493620140203185 382.5961340718563 302370.6239579912 0.009149881462341984 0.013571520623108355 2.7894807987624158e-08 7.554476623685492 0.038913614526574714 KVIYSQPS(ph)AR ddPTM_A549_MK2206_60min_R1 2 KVIYSQPSAR 10 1 A0A087WY82;Q9Y624-2;Q9Y624 A0A087WY82 F11R Junctional adhesion molecule A 1 KVIYSQPS(1)AR;KVIYSQPS(1)AR 101.39 0.00017830000000000002 33872000.0 4264.9 7193.0 6199.700000000001 4642.5 7406.4 5524.8 4163.7 5170.2 7822.0 7252.4 6671.6 True False 4984.710853206064 7559.092976212941 7078.910684190236 5779.912708409745 6316.928371198752 6109.43066893457 4920.190394194229 5903.091683073442 6050.329489167288 5614.077802989446 5014.857593207166 0.99398851523881 1.5073395077962028 1.411587578035898 1.1525576950059118 1.2596426227048392 1.2182660335579716 0.9811226545812253 1.1771205011024493 1.206480817593447 1.119488978230199 1.0 12.291993017904158 -7.207425710063 1.201917294679262 1.099089537777935 1.3031312967705209 0.22598793050819233 0.14037977970712415 0.4687657042696205 1.330591014293318 0.023499113435116945 0.051006864114772385 6.202607356996217e-08 7.207425710063 0.2040417589925858 KVIYSQPS(ph)AR ddPTM_A549_PD325901_60min_R1 4 KVIYSQPSAR 10 1 A0A087WY82;Q9Y624-2;Q9Y624 A0A087WY82 F11R Junctional adhesion molecule A 1 KVIYSQPS(1)AR;KVIYSQPS(1)AR;KVIYSQPS(1)AR;KVIYS(0.002)QPS(0.998)AR 130.1 5.2911e-07 84738500.0 9525.599999999999 10955.199999999999 11372.6 11857.8 15311.599999999999 10869.6 12162.6 13593.0 12383.1 12630.5 14260.099999999999 True False 10492.631899623904 11878.433151277746 12144.413024999356 12590.229374982282 14236.166038152402 10781.081581404396 12625.4543986301 13321.876951497792 11862.68137039023 11833.008074465386 12506.1981022218 0.8389945380570796 0.9498036936714981 0.9710715379473982 1.0067191701325724 1.13832884476884 0.8620590760903646 1.0095357754158005 1.0652219677482224 0.9485441757301728 0.9461714885488006 1.0 13.610355654848075 -5.218341345219326 1.8600535928206559 0.9887748266012834 0.7806826769391331 0.31357876586996125 0.06659163540222873 0.8653280872375656 2.7715242701232947 0.00881960651851569 0.32292925375085935 6.04865278032565e-06 5.218341345219326 -0.20809214966215028 KVKEEAS(ph)SPLK ddPTM_A549_MK2206_60min_R1 1 KVKEEASSPLK 11 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KVKEEAS(0.627)S(0.373)PLK 48.111999999999995 0.010143000000000001 9673700.0 2172.5 2313.6 2867.0 2250.0 2961.1 2363.7 2435.9 2738.4 3470.3 2998.0 3430.6 True False 2539.164887474543 2431.3523578154122 3273.583710755908 2801.2501010063374 2525.52611254545 2613.825165102926 2878.471499199684 3126.57658599828 2684.2825909303533 2320.7497177985724 2578.6873402566835 0.9846734219518809 0.9428643480187848 1.269476783653056 1.0863085482583166 0.9793843841084116 1.0136262447554982 1.1162545587683228 1.2124682729807248 1.0409492259977353 0.8999732854652958 1.0 11.332421145030079 -9.12099766128056 4.087014887200561 1.016183756230789 1.076519550992084 0.12615375535767925 0.10060880392258692 0.41928465728347725 14.364527432435185 0.017920369995859792 0.01754174771079909 7.568369706531639e-10 9.12099766128056 0.060335794761295025 KVKEEASS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 KVKEEASSPLK 11 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KVKEEAS(0.009)S(0.991)PLK;KVKEEAS(0.047)S(0.953)PLK 103.13 4.4723e-05 107157000.0 17986.0 20591.7 22252.0 18374.0 26760.0 21317.0 21864.3 19787.6 27531.0 28607.0 28493.0 True False 21021.59708451882 21639.729575738093 25407.668200816326 22875.630824840213 22823.639448757636 23572.75079092062 25836.76029391666 22592.552896983492 21295.272457972966 22144.65883157563 21417.4017332052 0.9815194833800625 1.0103807102888769 1.1863095494643816 1.0680861810316702 1.0656586514587447 1.1006354124820754 1.2063442903001516 1.0548689882375581 0.994297661464561 1.0339563644287861 1.0 14.38649584871386 -8.625622360243417 4.63318697576285 0.9975090646903453 1.090567649348538 0.22317181684499687 0.0629997979364592 0.19052640403006288 7.068741205095057 0.010601973332222748 0.01202930494534802 2.367977872166466e-09 8.625622360243417 0.09305858465819261 KVKEEASS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 KVKEEASSPLK 11 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KVKEEAS(0.015)S(0.985)PLK 74.76899999999999 0.00045276 16137000.0 3576.7 3430.2 3131.8 3482.1 4302.8 4156.9 3694.3 3756.1 3543.5 4270.2 3608.8 True False 3939.8039509726227 3719.2749922879457 3344.3427810432954 3697.181408577122 4000.586171854159 4123.0475846158 3834.88860809853 3681.181638896555 3394.5790178531865 4000.5788432431086 3164.94047806804 1.2448271865692648 1.1751484800618701 1.0566842581143159 1.1681677536109543 1.264032040910993 1.3027251580834192 1.2116779556118045 1.1631124390508731 1.0725569853134564 1.2640297253505264 1.0 11.627962652308266 -8.863695076555336 1.621122589259013 1.0257074018671146 1.2015620736929324 0.0 0.0939905278466685 0.18632776545565038 0.9686365446961284 0.013498294153471752 0.013960082493518685 1.368689461858504e-09 8.863695076555336 0.17585467182581782 KVKYS(ph)GSK ddPTM_A549_PD325901_60min_R1 1 KVKYSGSK 8 2 P48506;E1CEI4;B4E2I4;A0A2R8YEL6;A0A2R8Y648 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 KVKY(0.003)S(0.847)GS(0.15)K 55.401 0.0043023 6857700.0 3793.0 3812.8 3444.0 3486.3 4133.9 3727.6 3356.1 3657.3 3979.8 6374.6 6571.3 True False 4178.062567740983 4134.118037022764 3677.7305504544065 3701.6408330382274 3843.5491251807907 3697.2436614818394 3483.818222028386 3584.352282403655 3812.542846127307 5972.106668103956 5763.071758902823 0.7249714635752522 0.7173462712200932 0.6381545648417495 0.6423034430067461 0.6669271676590277 0.6415404520636618 0.6045071739123439 0.6219517008210993 0.661547002297459 1.0362714395978525 1.0 12.492622268219533 -10.533664742445888 0.739525786035171 1.0119964329461566 0.6541732746641498 0.921437053598121 0.04021345779198408 0.16025744087398033 0.14994260331848094 0.03329936352307261 0.00830671979298872 2.926410575230308e-11 10.533664742445888 -0.35782315828200684 KVKYSGS(ph)K ddPTM_A549_MK2206_60min_R1 1 KVKYSGSK 8 2 P48506;E1CEI4;B4E2I4;A0A2R8YEL6;A0A2R8Y648 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 KVKYS(0.079)GS(0.921)K 50.292 0.006491299999999999 8752600.0 4990.6 3922.5 3216.9 2753.3 4593.1 3408.0 3004.8 3229.3 4419.6 4598.4 4608.0 True False 5832.891271544514 4122.138495647888 3673.1047921627733 3427.8586236003334 3917.461074442781 3768.6322979526863 3550.733265238807 3687.0631643164816 3418.567656650952 3559.6182462725005 3463.7064256697963 1.6840027862397648 1.1900946526814167 1.0604549984205098 0.9896504502218225 1.1310026292673576 1.0880345603262045 1.0251253509604763 1.0644848931166253 0.9869680730779268 1.0276905166938786 1.0 11.758100941003057 -5.111936070016785 1.6094602258237416 1.0168592323645314 2.1298754840259013 0.9413656258938853 0.045996945940449674 0.25985440492412315 0.4723869189452574 0.007360533960033252 0.5031574661354038 7.727943353154946e-06 5.111936070016785 1.11301625166137 up KVLGSSTSATNS(ph)TSVSSR ddPTM_A549_PD325901_60min_R1 1 KVLGSSTSATNSTSVSSR 18 1 H0YMA4;A0A0U1RQM0;Q15004;A0A0U1RQC1;Q15004-2 H0YMA4 KIAA0101 PCNA-associated factor 1 KVLGSSTSAT(0.003)NS(0.329)T(0.267)S(0.267)VS(0.061)S(0.074)R 55.126999999999995 0.0044217 2460500.0 610.0 778.56 609.87 566.52 818.51 826.92 599.79 728.53 658.47 832.81 809.4 True False 671.9267509417342 844.1719835565573 651.259445646234 601.5126537397289 761.0206813062075 820.1858376844523 622.6153366676814 713.9988976292711 630.796795791107 780.2262344717564 709.848931209341 0.9465771115510446 1.189227660198594 0.91746203595279 0.84738122055767 1.072088225884467 1.1554371664505216 0.8771096345907808 1.0058462670541182 0.888635268797889 1.099144057514486 1.0 9.471368215258336 KVLGSSTSATNSTS(ph)VSSR ddPTM_A549_PD325901_60min_R1 1 KVLGSSTSATNSTSVSSR 18 1 H0YMA4;A0A0U1RQM0;Q15004;A0A0U1RQC1;Q15004-2 H0YMA4 KIAA0101 PCNA-associated factor 1 KVLGSSTSAT(0.001)NS(0.072)T(0.092)S(0.348)VS(0.348)S(0.14)R 67.11 0.00079026 1942500.0 526.58 685.67 604.6 638.77 781.72 743.44 727.23 994.08 721.28 662.15 742.45 True False 580.0380139522929 743.4538172590738 645.6317917551498 678.2253721480738 726.8146839875968 737.3856711267464 754.9051356055257 974.252294559326 690.9671099187652 620.3417359967741 651.1333567783239 0.8908129308905377 1.1417842589689045 0.9915507860779937 1.0416074757769986 1.1162301492028128 1.1324648990111357 1.1593710071015921 1.496240799856621 1.0611760290357888 0.9527107305116412 1.0 9.346809237711968 -5.249354093354912 23.006569867100232 1.0824434635629165 0.8908125680676474 0.14216871627809557 0.14088034103634234 996.6255718191247 1897149.6387555837 0.0197244875840506 0.41606501279044905 5.631782923824941e-06 5.249354093354912 -0.19163089549526913 KVLQLLR ddPTM_A549_MK2206_60min_R1 1 KVLQLLR 7 1 P18124;A8MUD9;C9JZ88;C9JIJ5 P18124 RPL7 60S ribosomal protein L7 0 57.559 0.05241799999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVLS(ph)DS(ph)EDEEKDADVPGTSTR ddPTM_A549_PD325901_60min_R1 1 KVLSDSEDEEKDADVPGTSTR 21 2 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 2 KVLS(1)DS(0.999)EDEEKDADVPGT(0.001)STR 59.372 0.0011407 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVLS(ph)PTAAKPSPFEGK ddPTM_A549_MK2206_60min_R1 2 KVLSPTAAKPSPFEGK 16 2 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 KVLS(0.839)PT(0.161)AAKPSPFEGK;KVLS(0.845)PT(0.155)AAKPSPFEGK 133.26 6.8172e-11 26726000.0 4588.1 4752.0 4738.5 4218.0 6160.5 4379.9 4242.6 4673.9 6475.6 5948.299999999999 6270.3 True False 5362.459111724722 4993.856502566928 5410.490552290499 5251.410189353219 5254.298610765005 4843.3781108576795 5013.425502896088 5336.439638218438 5008.886939408295 4604.57489872623 4713.211458523726 1.1377505887258352 1.059544335430922 1.147941398323167 1.114189387759417 1.1148022228586278 1.027617401315307 1.063696281614828 1.1322300484879835 1.0627333365978833 0.9769506289387823 1.0 12.202494694069657 -11.380065728816476 0.16984213773973525 0.8930384589951827 1.1332197977240013 0.6011441137494433 0.03492536217933256 8.06054251283916 0.2839105243074718 0.43626713587551935 0.06790580573691386 4.1680629665026555e-12 11.380065728816476 0.24018133872881853 KVLS(ph)PTAAKPSPFEGK ddPTM_A549_PD325901_60min_R1 1 KVLSPTAAKPSPFEGK 16 2 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 KVLS(0.792)PT(0.208)AAKPSPFEGK 100.67 2.6354e-07 13055000.0 2600.7 2770.0 3061.2 2745.6 3325.1 2934.9 2473.3 2937.0 3316.1 2958.8 3506.8 True False 2864.7211494658495 3003.4376213158453 3268.9514404910065 2915.1894762899815 3091.5564469722635 2910.9991474629933 2567.4227849416916 2878.419230968072 3176.7358490483825 2771.9808630480347 3075.4858314367652 0.9314694674198992 0.9765733890286656 1.0629057064990153 0.9478793387671376 1.0052253908540982 0.946516845471231 0.8348023452744299 0.9359234243727177 1.032921633576285 0.9013147889395599 1.0 11.586598614216681 -8.763382831296147 24.999999951342893 1.0155463284476778 0.9565930235464285 0.0 0.06304976398640229 63.66783518344644 819001.7237162064 0.009665104301450936 0.010543838308004863 1.7243172333955545e-09 8.763382831296147 -0.05895330490124928 KVLSPT(ph)AAKPSPFEGK ddPTM_A549_PD325901_60min_R1 1 KVLSPTAAKPSPFEGK 16 2 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 KVLS(0.425)PT(0.574)AAKPS(0.001)PFEGK 90.97200000000001 3.4605e-06 12574000.0 2433.7 2677.1 3126.9 2858.7 3388.5 3186.8 3316.0 2799.4 3174.6 3354.2 3280.2 True False 2680.767432404751 2902.7086122832666 3339.110237577204 3035.275406421245 3150.503449690391 3160.847757380171 3442.1921945848253 2743.5637709131847 3041.182601968877 3142.4152395686447 2876.756194901015 0.9318716119066157 1.009021417048915 1.1607206211967844 1.0551034570816955 1.095158308957355 1.098754132513107 1.1965533265161756 0.9537004824309022 1.0571568794600334 1.0923467359307348 1.0 11.490227242509652 -9.996413787754403 0.6375444292001438 1.0024278163041966 1.0694994996909957 0.0 0.07930761506250189 1.386716740239092 1.1207433022881854 0.04440739405934388 0.017036327459286266 1.0082917465336243e-10 9.996413787754403 0.06707168338679903 KVMDS(ph)DEDDDY ddPTM_A549_MK2206_60min_R1 2 KVMDSDEDDDY 11 1 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 KVMDS(0.62)DEDDDY(0.38);KVMDS(0.699)DEDDDY(0.301) 85.258 0.00035803 18635300.0 7421.2 8551.2 7986.700000000001 7414.8 10448.9 8275.7 7873.1 7938.9 12031.1 11650.7 13203.400000000001 True False 8673.717129079901 8986.419554871696 9119.334155107845 9231.426332863019 8911.88065157413 9151.429081034932 9303.540358942902 9064.263386861583 9306.075059718803 9018.798778237435 9924.631384698045 0.873958617994939 0.9054663298353933 0.9188587264982133 0.9301530681629324 0.8979558339380354 0.922092592289599 0.937419234863196 0.9133098283969527 0.9376746298171899 0.9087288412688821 1.0 13.27679780411225 -14.99999999999995 0.12374012699213838 1.2977164302230035 0.8752069296704902 0.0 0.03099516874918684 19.0549860167528 0.16316092574604754 1.3933407422655597 0.046865254352589765 1.0000000000001145e-15 14.99999999999995 -0.42250950055251335 KVMDS(ph)DEDDDY ddPTM_A549_PD325901_60min_R1 2 KVMDSDEDDDY 11 1 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 KVMDS(0.884)DEDDDY(0.116);KVMDS(1)DEDDDY 62.14 0.0030285999999999998 19595500.0 5467.1 4747.7 4544.5 5411.6 6513.0 5238.4 5541.299999999999 6299.9 5738.200000000001 5319.4 6707.6 True False 6022.1159673337 5147.805341054596 4852.917098298502 5745.862241364683 6055.549348630227 5195.740207185984 5752.177203815711 6174.2435523240565 5497.043409128025 4983.532176185516 5882.607722979707 1.0237153743583853 0.8750890053309703 0.8249601752877654 0.9767542749653619 1.0293988030129806 0.8832375796348689 0.9778277720857563 1.0495759437103223 0.9344569055071408 0.8471637768260393 1.0 12.522240119148744 -6.391449226643311 21.303602180640574 0.9734079510628973 0.9039902958712303 0.08725889696880595 0.07177981871264907 5.827666431429276 949.3922062979732 0.008365298565255742 0.01943921128433073 4.0602312863043254e-07 6.391449226643311 -0.0694176551916671 KVMDSDEDDDY(ph) ddPTM_A549_MK2206_60min_R1 8 KVMDSDEDDDY 11 1 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 KVMDS(0.002)DEDDDY(0.998);KVMDS(0.012)DEDDDY(0.988);KVMDS(0.056)DEDDDY(0.944);KVMDS(0.001)DEDDDY(0.999);KVMDS(0.002)DEDDDY(0.998);KVMDS(0.001)DEDDDY(0.999);KVMDSDEDDDY(1);KVMDSDEDDDY(1) 141.88 7.3623e-12 2688559300.0 111867.4 125534.90000000001 112328.5 106510.0 158096.7 121321.90000000001 110842.2 111248.3 175563.1 173368.4 175859.7 True False 130747.8822246579 131924.0902070893 128258.37037099586 132604.9547814153 134840.8848594323 134160.1029310405 130980.79297532381 127018.08720863011 135798.33816666127 134204.3580304168 132188.88300919344 0.9890989260841601 0.9979968602799546 0.9702659365241462 1.003147554943731 1.0200622154440506 1.0149121459912025 0.9908608802316182 0.9608832779061783 1.0273052852501734 1.015246932838393 1.0 17.012241326759742 -6.500135826920377 22.323121788854888 1.0081762365906182 0.9869579439655877 0.14512583223773678 0.0181181103756892 258.2299125443809 253461.97096023182 0.0027963091400959 0.006440958144177851 3.161288802852365e-07 6.500135826920377 -0.0212182926250305 KVMDSDEDDDY(ph) ddPTM_A549_PD325901_60min_R1 6 KVMDSDEDDDY 11 1 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 KVMDS(0.076)DEDDDY(0.924);KVMDS(0.006)DEDDDY(0.994);KVMDS(0.001)DEDDDY(0.999);KVMDS(0.461)DEDDDY(0.539);KVMDSDEDDDY(1);KVMDSDEDDDY(1) 156.94 7.9256e-14 7426354200.0 103745.9 107789.8 103298.3 107367.3 121788.2 108740.5 106445.2 107877.40000000001 121438.8 117639.2 128187.20000000001 True False 114278.1073943048 116873.62473433613 110308.74382113965 113999.13427216976 113234.21697848105 107854.9534207979 110496.03033504834 105725.70062881663 116335.1495508028 110211.44083556854 112420.9870456117 1.0165193385816798 1.0396068190267524 0.9812113086712619 1.0140378346430792 1.0072337910762108 0.9593845086686416 0.9828772477350483 0.9404445149189212 1.034817008888234 0.9803457853545913 1.0 16.778551861243617 KVNEEKDGPIS(ph)PK ddPTM_A549_MK2206_60min_R1 3 KVNEEKDGPISPK 13 2 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 KVNEEKDGPIS(1)PK;KVNEEKDGPIS(1)PK;KVNEEKDGPIS(1)PK 67.93 0.0013513 50293900.0 3995.28 4187.16 4651.9 3709.33 5287.199999999999 3964.12 4241.98 4386.6 5592.799999999999 6370.200000000001 5779.2 True False 4669.585588782186 4400.268559193629 5311.609370096058 4618.11601651815 4509.459883911489 4383.600547230107 5012.692856921497 5008.413983399083 4326.039729866373 4931.167395703956 4344.065142194204 1.0749345223731062 1.0129379774841583 1.2227278358475868 1.063086271810722 1.0380737250256205 1.0091010156942382 1.153917515700413 1.1529325227543237 0.9958505658322779 1.1351504257629996 1.0 12.084830022154241 -8.790014108845595 24.690325292375796 0.9980405135844812 1.0894326152929168 0.0 0.0742309547773507 158.90006622638637 137298.72384271765 0.010624685248383491 0.011311846736498076 1.6217574107660168e-09 8.790014108845595 0.09139210170843559 KVNEEKDGPIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KVNEEKDGPISPK 13 2 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 KVNEEKDGPIS(1)PK;KVNEEKDGPIS(1)PK 82.007 0.00018519999999999998 20624000.0 5229.6 4410.4 5150.6 5352.1 6123.9 6027.9 5494.0 6084.700000000001 6189.3 5607.9 5923.9 True False 5760.505142171954 4782.079886300148 5500.150689073891 5682.687061498985 5693.778390308097 5978.810780943874 5703.077176432155 5963.335885145193 5929.185244870525 5253.816236949798 5195.2978546960885 1.1087920853209539 0.9204630841285784 1.0586786057130955 1.093813525313537 1.095948403643773 1.1508119357467752 1.0977382502289217 1.147833300790419 1.1412599259368867 1.0112637203660642 1.0 12.342990748165903 -5.988908057374977 24.96093092603026 1.085274812646188 1.0083633868095891 0.18330700404502864 0.06197287268515138 294.1027893750391 661828.6042672005 0.009442380872506598 0.029319444484755316 1.0258690856147841e-06 5.988908057374977 -0.07691142583659882 KVNQQPNTSDKKS(ph)SPQK ddPTM_A549_MK2206_60min_R1 2 KVNQQPNTSDKKSSPQK 17 3 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 KVNQQPNT(0.037)S(0.037)DKKS(0.509)S(0.418)PQK;KVNQQPNT(0.025)S(0.025)DKKS(0.475)S(0.475)PQK 64.2 0.00047865 32081000.0 2656.7 3080.5 2894.3999999999996 2638.1 4003.2999999999997 2728.64 2456.9 1878.73 5464.7 4294.6 4909.700000000001 True False 3105.086009921115 3237.2842921206666 3304.8694427666187 3284.434618428811 3414.4198731394417 3017.3828736753585 2903.2869273712813 2145.0457308693203 4226.954175332709 3324.446877270764 3690.4859891733936 0.8413759106606449 0.8771972855655695 0.8955106326001399 0.8899734690943696 0.9251951865299491 0.8176112529697481 0.7866950141223997 0.5812366547826332 1.1453651870602213 0.900815471735576 1.0 11.849595097696596 -8.795590249113696 24.999991389119916 1.0686447020953977 0.8345520396542845 0.3591303764772853 0.10547722363258791 102.68813438676915 75171.94141400242 0.01767781589181885 0.018819923455861733 1.6010679018332941e-09 8.795590249113696 -0.23409266244111326 KVNQQPNTSDKKS(ph)SPQK ddPTM_A549_PD325901_60min_R1 2 KVNQQPNTSDKKSSPQK 17 3 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 KVNQQPNT(0.073)S(0.073)DKKS(0.427)S(0.427)PQK;KVNQQPNT(0.023)S(0.023)DKKS(0.477)S(0.477)PQK 48.229 0.0039869 59488000.0 2525.3599999999997 2857.5 3729.9 3364.4 4155.6 3955.6000000000004 4118.7 4119.6 4139.5 4188.7 4485.4 True False 2781.7326881282247 3098.3115533971236 3983.03344371077 3572.2113468932143 3863.7249920417275 3923.3869050750004 4275.439382339121 4037.431346236319 3965.531210499012 3924.2247671519867 3933.724235293277 0.7071498970798683 0.7876280511986957 1.0125349936772619 0.908099076911244 0.982205350689426 0.997372126361698 1.0868680991870208 1.0263635945836223 1.0080857155466985 0.997585120976183 1.0 11.941680108999552 -5.2808688015220255 0.9503545745624054 1.0092819029710476 0.5225618241964998 0.8298035983037397 0.04426187678854998 0.5284081943607272 0.3645999839383795 0.00635063386159996 0.26196365182047837 5.237586378997734e-06 5.2808688015220255 -0.4867200787745478 KVNT(ph)SPRRK ddPTM_A549_MK2206_60min_R1 1 KVNTSPRRK 9 3 H0Y448;Q8WZ74 H0Y448 CTTNBP2 Cortactin-binding protein 2 1 KVNT(0.5)S(0.5)PRRK 47.938 0.0082043 6297500.0 2100.4 2415.4 1873.8 2116.1 2394.3 1830.8 2141.1 1957.1 2379.1 2777.4 2382.5 True False 2454.8961701503035 2538.3335429924555 2139.5330161194343 2634.5445949953396 2042.1016417100304 2024.5340408133172 2530.1101551526904 2234.524918367381 1840.2376486420208 2149.983411011926 1790.8594963451158 1.3707921672026142 1.4173828534135848 1.194696189447531 1.471106248352851 1.1402913773401337 1.1304817853913707 1.4127909868508823 1.2477388220168706 1.0275723206637253 1.2005315969230026 1.0 10.80643643835805 -8.725618522933733 3.937378348223346 1.0116010993449172 1.3005700180305 0.37636640681804523 0.12143476622079755 0.10603159150414335 3.4780642533396913 0.018183884175919884 0.020150302223959613 1.8809683027226938e-09 8.725618522933733 0.28896891868558283 KVNVTVDYIRPAS(ph)PATETVPAFSER ddPTM_A549_MK2206_60min_R1 4 KVNVTVDYIRPASPATETVPAFSER 25 2 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 KVNVTVDYIRPAS(0.778)PAT(0.219)ET(0.002)VPAFSER;KVNVT(0.001)VDY(0.001)IRPAS(0.962)PAT(0.019)ET(0.014)VPAFS(0.003)ER;KVNVTVDYIRPAS(0.987)PAT(0.013)ETVPAFSER;KVNVTVDYIRPAS(0.972)PAT(0.027)ET(0.001)VPAFSER 167.61 2.4570999999999998e-48 85647200.0 5673.360000000001 5858.379999999999 6174.33 6211.17 8091.009999999999 6503.0 5821.2 5304.96 8464.87 8996.199999999999 8289.7 True False 6630.8844676651715 6156.546518835861 7049.942836704405 7732.90692883002 6900.833147096133 7191.143143657961 6878.836689166715 6056.954325758632 6547.590460619727 6963.9521718677515 6231.138705919033 1.0641529230229485 0.9880291242734951 1.1314052165148532 1.2410102380620158 1.107475450761664 1.1540656504447588 1.103945364373357 0.9720461398179211 1.050785541718096 1.117605063943226 1.0 12.605280116493468 -8.147596343800652 6.603703105561731 1.0208584936717924 1.115845292274872 0.22778790892429435 0.06712317290043757 0.22148050680408513 11.50880915895635 0.010338434042277552 0.013380634392691302 7.118748603051412e-09 8.147596343800652 0.09498679860307968 KVNVTVDYIRPAS(ph)PATETVPAFSER ddPTM_A549_PD325901_60min_R1 4 KVNVTVDYIRPASPATETVPAFSER 25 2 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 KVNVTVDYIRPAS(0.933)PAT(0.067)ETVPAFSER;KVNVT(0.001)VDYIRPAS(0.921)PAT(0.076)ET(0.002)VPAFSER;KVNVT(0.016)VDY(0.001)IRPAS(0.955)PAT(0.013)ET(0.014)VPAFSER;KVNVTVDYIRPAS(0.992)PAT(0.006)ET(0.002)VPAFSER 163.15 2.2115e-41 207550000.0 8055.9 8558.199999999999 9130.6 10483.800000000001 12229.8 11195.8 11539.0 11315.199999999999 11000.7 10881.300000000001 11209.7 True False 8873.729037559862 9279.429549005512 9750.257422758132 11131.360515562686 11370.821038519567 11104.625116755653 11978.122959383078 11089.509459397314 10538.378834964728 10194.252860985725 9830.977964143012 0.9026293284274902 0.9438968923387695 0.9917891646508317 1.132273976827394 1.156631728805913 1.1295544713107968 1.2184060429258867 1.1280169175279002 1.0719563072363556 1.0369520609412108 1.0 13.263119224507713 -5.956074202126485 3.0704404671079026 1.0752987300307675 0.9221730659040375 0.5365436397055688 0.06361238515243448 0.21091930196249603 4.0270109866097545 0.011373569621447234 0.04055737469839977 1.1064347260297504e-06 5.956074202126485 -0.15312566412673 KVPCS(ph)PDFQR ddPTM_A549_MK2206_60min_R1 1 KVPCSPDFQR 10 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 KVPCS(1)PDFQR 42.208999999999996 0.033658 6577600.0 1721.2 1917.2 2051.5 1384.7 2068.7 1765.4 1734.4 1382.7 2719.6 2820.1 3353.0 True False 2011.696480700201 2014.7772909767061 2342.433548174309 1723.9515621615453 1764.396970390318 1952.2134562223227 2049.518029562761 1578.7019593411562 2103.6149423087886 2183.037451355488 2520.3575619077305 0.7981790009102877 0.7994013712291139 0.9294052493096473 0.6840107087252482 0.7000581969229778 0.7745779748587088 0.8131854227903371 0.6263801546262315 0.8346494061408106 0.8661618035272284 1.0 11.299412707354529 -9.904070381119144 0.8717685856990545 0.9821015770578576 0.7704688211390435 0.3166108880166364 0.08513742188142745 0.299299706373793 0.46640642822489276 0.031002213618005803 0.016150547944260626 1.2471813815011377e-10 9.904070381119144 -0.21163275591881414 KVPLPGPGS(ph)PEVK ddPTM_A549_PD325901_60min_R1 1 KVPLPGPGSPEVK 13 1 Q8WXD9 Q8WXD9 CASKIN1 Caskin-1 1 KVPLPGPGS(1)PEVK 42.338 0.035504 2790100.0 1622.9 1692.7 2098.5 1831.4 2084.3 2313.1 1800.0 2391.0 2397.9 2363.1 2136.4 True False 1787.6556132841642 1835.3497695311669 2240.9168293056264 1944.5214185888235 1937.9059584446472 2294.262880505862 1868.4999849977946 2343.309629296786 2297.124601921872 2213.8934627108315 1873.63634375542 0.9541102355546112 0.9795656321719756 1.1960254916992314 1.0378328884736112 1.0343020751617191 1.2244974261693493 0.9972586148989134 1.250674730508257 1.2260247884163231 1.1816025399429526 1.0 10.871625250481047 KVPLQEGPKS(ph)FDGNTLLNR ddPTM_A549_MK2206_60min_R1 1 KVPLQEGPKSFDGNTLLNR 19 2 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KVPLQEGPKS(0.746)FDGNT(0.254)LLNR 71.05199999999999 0.00019644 5117700.0 1633.3 2726.7 2201.0 2183.6 2956.3 2164.9 2019.4 2397.7 2867.3 2963.9 3749.0 True False 1908.9611096488707 2865.47738332265 2513.134896188962 2718.5820980255294 2521.4321861869294 2393.9882810556846 2386.2988404630073 2737.5813176482898 2217.8611281372237 2294.352931482052 2818.0198328637316 0.677412233720493 1.0168407439527105 0.891808803785125 0.9647136142625542 0.8947531727002065 0.8495285423959784 0.846799874377747 0.9714556603621564 0.7870282182802759 0.8141720312700859 1.0 11.460466049848836 -11.115685676526152 1.4735649036534662 0.9998172861103488 0.872996436102782 0.0 0.1039339903218664 0.4993650254957533 1.944567227504857 0.06142369392089233 0.013385469022682983 7.661509130336839e-12 11.115685676526152 -0.12682085000756682 KVPLQEGPKS(ph)FDGNTLLNR ddPTM_A549_PD325901_60min_R1 2 KVPLQEGPKSFDGNTLLNR 19 2 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 KVPLQEGPKS(0.915)FDGNT(0.085)LLNR;KVPLQEGPKS(0.986)FDGNT(0.014)LLNR 107.9 2.2863e-10 23780000.0 8293.3 7732.7 8385.0 7735.9 11427.4 10611.0 9703.0 9987.0 11272.6 9482.0 10676.9 True False 9135.229710795218 8384.361766913013 8954.056523101102 8213.728973496385 10624.778846389849 10524.587534065833 10072.252974685329 9787.801450350062 10798.85182352245 8883.304901791756 9363.708986445536 0.9755994899050096 0.8954103314242059 0.9562510471077832 0.8771875530717788 1.1346763191561995 1.1239763590795837 1.0756691594394323 1.0452910769139048 1.1532664929200982 0.9486951073181376 1.0 13.192864382467851 -6.760052651286696 24.999988164390885 1.0796648519893006 0.926071894021581 0.5495608487863426 0.06164241915163263 20.130759003042456 362905.3051385751 0.008895041827113438 0.01775234674264542 1.7375901608560752e-07 6.760052651286696 -0.15359295796771966 KVPPGLPSSVYAPS(ph)PNSDDFNR ddPTM_A549_PD325901_60min_R1 1 KVPPGLPSSVYAPSPNSDDFNR 22 1 Q99081;Q99081-3;B4DGI9 Q99081 TCF12 Transcription factor 12 1 KVPPGLPSSVYAPS(0.779)PNS(0.221)DDFNR 88.571 8.8693e-07 2841500.0 3811.9 3850.5 3946.4 3707.6 5573.7 5174.1 3819.3 4855.7 4412.4 4391.9 4848.9 True False 4198.881281827536 4174.995148330923 4214.226435631032 3936.6100314294636 5182.22254022114 5131.96384506739 3964.645551501151 4758.849254277042 4226.962172534328 4114.594684473655 4252.5160397096315 0.9873875236727485 0.9817705822494672 0.9909960118383905 0.9257131530298147 1.2186250426406364 1.2068064640193124 0.9323058430537662 1.1190667383354498 0.9939908828240308 0.9675671169848442 1.0 12.054100962141789 KVPPPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 KVPPPSPK 8 1 A0A075B754;Q96QE3 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 KVPPPS(1)PK;KVPPPS(1)PK 77.062 0.0018976 43939000.0 11174.1 12339.9 10990.5 11428.7 14754.3 11415.5 9848.7 9668.7 16558.300000000003 15440.3 15020.9 True False 13060.014899484138 12967.948202025595 12549.118162909941 14228.73201305384 12583.962014903016 12623.48063300438 11638.081306362299 11039.26783415191 12807.871488171655 11952.325506245934 11290.795974249879 1.1566956775473751 1.1485415405256352 1.1114467209867072 1.2602062817806914 1.114532761339623 1.1180328350449216 1.0307582683191203 0.9777227273726661 1.1343639117544648 1.0585901590556377 1.0 13.462859575813075 -7.406576175182985 2.315114506630209 1.055518090621636 1.1626436475039632 0.522638820210263 0.05292068021233739 0.24776848594613365 2.6014871177465677 0.009819426877017616 0.016679746942389717 3.921243617498005e-08 7.406576175182985 0.10712555688232728 KVPPPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 KVPPPSPK 8 1 A0A075B754;Q96QE3 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 KVPPPS(1)PK;KVPPPS(1)PK 61.343999999999994 0.0045495 79280000.0 33806.0 33781.0 35361.0 35571.0 40586.0 38680.0 36215.0 35147.0 42107.0 39817.0 39550.0 True False 37237.96023333813 36627.84342442979 37760.81010296697 37768.13988239764 37735.379374098935 38365.002904313114 37593.181642608375 34445.96551271189 40337.389221036836 37302.94782478827 34685.60072810656 1.0735855643740757 1.05599564820999 1.0886595391259433 1.0888708596531016 1.0879263608521292 1.1060786637385538 1.0838267423215113 0.9930912191121288 1.1629433648052836 1.075459183111706 1.0 15.082049250723792 -5.754129832333113 24.667738723097475 1.0773022427151955 1.0647906174245645 0.009479347618047584 0.044523721572266486 1048.900177801924 3539638.756703917 0.008163074449623409 0.030382212452642127 1.7614493824087122e-06 5.754129832333113 -0.01251162529063099 KVPRLS(ph)EK ddPTM_A549_MK2206_60min_R1 2 KVPRLSEK 8 2 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 KVPRLS(1)EK;KVPRLS(1)EK 59.542 0.00404 21248600.0 6315.4 7054.1 7689.5 6303.8 9075.1 6579.1 6976.6 5756.9 9522.099999999999 9272.7 9441.599999999999 True False 7381.285123294239 7413.123559502808 8779.986726144936 7848.231282988334 7740.164811712281 7275.295995146867 8244.157913426872 6572.958204766835 7365.359553669116 7177.990629830163 7096.990145096347 1.0400585279654537 1.0445447165549318 1.2371423021083738 1.1058534847214148 1.0906263998492847 1.0251241507181352 1.161641448681334 0.9261613825557315 1.0378145387109208 1.0114133573638655 1.0 12.79299158767307 -8.2516978099525 24.99645535966885 1.0114786453174802 1.1007024650131643 0.392297894076284 0.0625992278732186 613.3315063750423 1573783.848697686 0.009891207866278139 0.012695570338948954 5.60147226615449e-09 8.2516978099525 0.08922381969568405 KVPRLS(ph)EK ddPTM_A549_PD325901_60min_R1 1 KVPRLSEK 8 2 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 KVPRLS(1)EK 48.74100000000001 0.011437000000000001 14485000.0 5333.4 5484.3 5566.7 5914.0 6727.9 6982.3 6257.3 7399.8 8088.3 7289.4 7514.5 True False 5874.842841758436 5946.481208152523 5944.489737286452 6279.294348331496 6255.355513994981 6925.438463774183 6495.4249756259405 7252.205183969197 7748.376878820911 6829.146039983212 6590.264138340242 0.8914426976576413 0.9023130307566313 0.9020108469861075 0.9528137592847584 0.9491813048286092 1.050859012385254 0.9856092015853272 1.1004422632740885 1.1757308532966235 1.0362476976079342 1.0 12.686120574392652 -7.235581645890954 1.0065621970552623 1.083447455834308 0.8994642047014142 0.6783985039300681 0.048530528596742166 0.28661597618068363 0.57180768748244 0.011541241178350987 0.02672255321607246 5.813241350674874e-08 7.235581645890954 -0.1839832511328937 KVPRVS(ph)LER ddPTM_A549_PD325901_60min_R1 1 KVPRVSLER 9 2 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 KVPRVS(1)LER 41.684 0.028192000000000002 8130600.0 2522.6 2482.1 2195.9 2754.9 2585.7 2739.4 2371.2 2970.1 2919.0 2613.8 2845.1 True False 2778.692494960031 2691.2752779307084 2344.926979019405 2925.0639161681506 2404.089352180741 2717.091234645174 2461.4373135704286 2910.859025501624 2796.324581095936 2448.764221926102 2495.170736574867 1.11362819955734 1.078593636291613 0.939786181621502 1.1722900855207208 0.9634969330719413 1.0889400051136133 0.9864805151367139 1.1665971321455035 1.1206946843783783 0.9814014672549152 1.0 11.284922822622296 -11.08471227137106 1.4509128450587958 1.0004970407753357 1.0740979555798975 0.13918491710509662 0.07425144321785081 0.7000748789765173 2.661329399933241 0.048777524812297635 0.01103157841259412 8.227875823555112e-12 11.08471227137106 0.07360091480456177 KVPS(ph)DKER ddPTM_A549_PD325901_60min_R1 2 KVPSDKER 8 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 KVPS(1)DKER;KVPS(1)DKER 65.5 0.0018325 25787000.0 6620.799999999999 5772.0 6682.2 6218.2 7527.2 5885.700000000001 6100.799999999999 6332.5 6196.4 5916.0 6837.6 True False 7292.938742024646 6258.426696835761 7135.6942753328785 6602.284091443169 6998.51543943028 5837.768810597618 6332.9692824858585 6206.193319749851 5935.986856561441 5542.4627503691245 5996.6185471176095 1.216175196858259 1.0436592969289324 1.1899530075600335 1.101001179175668 1.1670769758723858 0.9735101148635933 1.0560900668810962 1.0349488250729202 0.989889019940194 0.9242646846418497 1.0 12.54993348863392 -7.2614939628984425 24.99999999998187 1.0021393380160089 1.1382339165521074 0.6548370613234489 0.05303356937471762 2.0770677134980575 951383.2085582089 0.006363540685504282 0.010580740078392487 5.476537138104256e-08 7.2614939628984425 0.13609457853609852 KVPS(ph)FTFTPTVTYQR ddPTM_A549_MK2206_60min_R1 2 KVPSFTFTPTVTYQR 15 1 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 KVPS(0.818)FT(0.181)FT(0.001)PTVTYQR;KVPS(0.792)FT(0.208)FTPTVTYQR 89.846 1.4018e-05 122803000.0 3693.2 4056.3 4129.0 3741.5 4900.8 3485.0 4197.799999999999 3803.6000000000004 5183.1 5390.200000000001 5377.2 True False 4316.5218699291045 4262.74834414188 4714.554287307686 4658.167667962319 4179.8988120505055 3853.780386844223 4960.485922796677 4342.7719480364685 4009.136125709916 4172.550076343516 4041.89283682978 1.067945649275236 1.054641603879168 1.166422386152499 1.152471838322143 1.0341438976222261 0.9534593178048972 1.2272680457029104 1.0744401505317196 0.9918957002468288 1.0323257554785186 1.0 11.980815356547044 -8.708783287679728 5.249888821177174 0.9960981054938431 1.09345016874383 0.21790649179689503 0.06971550655798871 0.18355683408435872 10.763055947594834 0.011646759699237341 0.01308779535694687 1.9553149117012277e-09 8.708783287679728 0.09735206324998691 KVPS(ph)FTFTPTVTYQR ddPTM_A549_PD325901_60min_R1 2 KVPSFTFTPTVTYQR 15 1 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 KVPS(0.853)FT(0.146)FTPTVTYQR;KVPS(0.797)FT(0.203)FT(0.001)PTVTYQR 148.24 3.651e-14 209560000.0 8122.9 7419.0 8028.5 8529.9 9760.5 8925.1 9255.099999999999 9397.2 9839.0 10631.0 10656.8 True False 8947.530828237075 8044.225166982761 8573.362289292454 9056.77255019155 9074.95615189703 8852.41694470747 9607.307895085041 9209.765474039212 9425.501046044157 9959.756845702195 9346.081159021138 0.9573564230822702 0.8607056829608436 0.9173216178437708 0.9690449286811149 0.9709905143652203 0.9471795498119372 1.0279504031282416 0.9854146692434455 1.0084976671689139 1.0656612837230413 1.0 13.190145849920539 -6.722588257557684 0.8370811460563455 1.0035201781559089 0.9023459021554802 0.5849972958850973 0.033858051203441535 0.29889177337745715 0.3767742473838461 0.004402468482860242 0.017509941802599002 1.8941385473891992e-07 6.722588257557684 -0.10117427600042872 KVPS(ph)VK ddPTM_A549_MK2206_60min_R1 1 KVPSVK 6 1 Q7L4E1;Q7L4E1-3;Q7L4E1-2 Q7L4E1 FAM73B Protein FAM73B 1 KVPS(1)VK 53.968 0.035424000000000004 6780000.0 3954.1 4109.3 3842.9 3385.0 5255.6 3968.3 3465.0 4393.9 5477.9 5779.8 5519.7 True False 4621.45541153652 4318.445817760579 4387.88100525423 4214.325151958422 4482.508202051222 4388.222872055649 4094.5456483135185 5016.748780754399 4237.164396408776 4474.139165754564 4149.006154029855 1.1138704643876665 1.0408386147044277 1.0575739929892272 1.0157432877907697 1.0803811890463075 1.057656390264316 0.9868738431097674 1.2091446950209321 1.0212480384714047 1.0783640707326774 1.0 12.018550081756386 -8.97643167673063 24.99959912430018 1.009374050736928 1.0673658445389738 0.03532039022374278 0.0582459639131072 188.77967318224427 200246.1716856416 0.009011179339000261 0.009301478703450747 1.0557675836573976e-09 8.97643167673063 0.05799179380204578 KVPS(ph)VK ddPTM_A549_PD325901_60min_R1 1 KVPSVK 6 1 Q7L4E1;Q7L4E1-3;Q7L4E1-2 Q7L4E1 FAM73B Protein FAM73B 1 KVPS(1)VK 52.716 0.037203 12044000.0 4532.9 4262.1 4934.1 4203.3 5585.6 4877.6 4762.2 5013.3 4909.4 4818.1 5470.3 True False 4993.076671055386 4621.28212484125 5268.957697153627 4462.9282946130825 5193.286725273913 4837.878442763127 4943.428126975831 4913.305798642233 4703.074990898382 4513.884343737912 4797.487779088782 1.0407690234916562 0.9632712656370748 1.098274334354718 0.9302636088133517 1.0825012932623475 1.008419127996615 1.0304201604271244 1.0241413891783688 0.9803203692145032 0.9408850114038775 1.0 12.228063416028972 -8.752305741853366 24.626782432129847 0.990706841171958 1.0215776836071888 0.14770085784923648 0.04732348577237215 270.97702190326027 730626.5583199015 0.006692389966178129 0.007534792793276281 1.7688632461092408e-09 8.752305741853366 0.03087084243523086 KVPYLASSPSTSDGGTDSPGTASPS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 KVPYLASSPSTSDGGTDSPGTASPSPTK 28 1 Q9Y597-3;Q9Y597-2;Q9Y597 Q9Y597-3 KCTD3 BTB/POZ domain-containing protein KCTD3 1 KVPYLASSPSTSDGGTDSPGT(0.003)AS(0.212)PS(0.761)PT(0.025)K;KVPYLASSPSTSDGGTDSPGT(0.126)AS(0.303)PS(0.524)PT(0.047)K 136.12 8.468999999999998e-28 11232200.0 1145.09 1839.56 998.52 1286.44 2061.94 1880.47 1472.33 1194.1100000000001 2129.44 2159.39 2100.06 True False 1338.353197237387 1933.1857466039598 1140.1251506327128 1601.6178577504854 1758.6313574354012 2079.460087245038 1739.8333028517873 1363.3787493085035 1647.1252400169253 1671.5822992385124 1578.55714329256 0.8478332272760459 1.2246536369102952 0.722257762715283 1.014608729595829 1.1140751951286614 1.3173169537009555 1.10216681749185 0.8636866616464471 1.0434371964396205 1.058930496334089 1.0 10.624390771383698 -4.982097258758583 15.476792234238259 1.0312850657687442 0.5006229150275554 0.11551033391215881 0.15280408522674663 2479377.578214478 49575251.52081859 0.019830114878144487 29968945.584839415 1.0420840321177971e-05 4.982097258758583 -0.5306621507411888 KVPYLASSPSTSDGGTDSPGTASPS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 KVPYLASSPSTSDGGTDSPGTASPSPTK 28 1 Q9Y597-3;Q9Y597-2;Q9Y597 Q9Y597-3 KCTD3 BTB/POZ domain-containing protein KCTD3 1 KVPYLASSPSTSDGGTDSPGT(0.006)AS(0.02)PS(0.947)PT(0.026)K;KVPYLASSPSTSDGGTDSPGT(0.004)AS(0.322)PS(0.655)PT(0.019)K 159.13 5.4061e-46 17335600.0 1767.99 1738.07 2222.08 2186.5 2400.3 2307.92 1739.1399999999999 2385.5 2389.0 2477.52 2271.8 True False 1947.4750432745527 1884.5432586571965 2372.8837112525357 2321.555139098209 2231.711208585464 2289.125064708438 1805.3239243939233 2337.9193311114514 2288.598637971289 2321.088964383792 1992.3830021267365 0.9774601776845879 0.9458739894114594 1.190977692903242 1.1652152907448534 1.1201215861625304 1.1489382625052256 0.9061128921833101 1.1734286673876848 1.1486740428563995 1.1649813122809136 1.0 10.96027929258804 -11.049572417731468 1.3836323464145688 1.0005135791321558 1.0949036816967292 0.0 0.10621934117039589 0.7748638207214393 2.6687335037429567 0.06678571634323634 0.015246858726231308 8.921288464933294e-12 11.049572417731468 0.09439010256457347 KVQAEDEANGLQTT(ph)PASR ddPTM_A549_PD325901_60min_R1 1 KVQAEDEANGLQTTPASR 18 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 KVQAEDEANGLQT(0.131)T(0.868)PAS(0.001)R 98.74 5.512300000000001e-07 13500000.0 5472.3 4646.8 4959.9 5369.3 6847.4 5350.2 5758.2 5774.0 5009.0 5719.8 5604.7 True False 6027.843867505661 5038.402143946016 5296.508640301628 5700.9494664349495 6366.4622462476 5306.629745053154 5977.331452007946 5658.8330403846285 4798.489149266711 5358.650851852824 4915.357431120576 1.226328695720398 1.0250327091263818 1.0775429283672986 1.1598239896737843 1.2952185747346983 1.0796020064492804 1.2160522476277513 1.1512556552971895 0.9762238487248278 1.0901853887421549 1.0 12.263080613813056 -8.758694083889438 24.975331506135667 0.9887723667022942 1.151528110645838 0.3374251428668674 0.07844553708718602 40.54536657096381 368860.3081317317 0.012146767783173642 0.013472343762595271 1.7430342306766202e-09 8.758694083889438 0.16275574394354375 KVQAEDEANGLQTTPAS(ph)R ddPTM_A549_MK2206_60min_R1 3 KVQAEDEANGLQTTPASR 18 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 KVQAEDEANGLQTT(0.003)PAS(0.997)R;KVQAEDEANGLQT(0.007)T(0.03)PAS(0.963)R;KVQAEDEANGLQTT(0.002)PAS(0.998)R 267.25 9.285299999999997e-101 413365300.0 28812.52 28537.33 28722.71 27894.37 44868.7 34226.4 30988.0 31574.76 51255.6 42260.7 40793.2 True False 33675.36897751809 29989.758204208363 32796.02217815338 34728.49190222587 38268.573667207485 37848.21493035442 36618.11848483098 36050.57892364702 39646.28843837414 32713.978518669137 30663.122604955115 1.098236778144578 0.9780399273282775 1.0695591117929257 1.1325817122295887 1.2480325034157917 1.2343235689974448 1.1942070922324637 1.1756982283931285 1.2929631775978145 1.0668834658536246 1.0 14.904217002093826 -6.247187867243172 3.297502739803907 1.1627900961760724 1.036797715505487 0.3005795076575568 0.082055712990539 0.32921062324838446 7.449661147816515 0.016027324334119984 0.04436521332629049 5.659943980403657e-07 6.247187867243172 -0.12599238067058538 KVQAEDEANGLQTTPAS(ph)R ddPTM_A549_PD325901_60min_R1 3 KVQAEDEANGLQTTPASR 18 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 KVQAEDEANGLQTT(0.341)PAS(0.659)R;KVQAEDEANGLQT(0.001)T(0.004)PAS(0.995)R;KVQAEDEANGLQT(0.002)T(0.044)PAS(0.954)R 242.09 5.725399999999998e-75 575751300.0 16702.41 17859.3 19757.6 19291.1 21822.1 19138.36 19452.6 22591.6 21953.7 22675.8 20634.4 True False 18398.026367535633 19364.365888218807 21098.469548100467 20482.667433733113 20289.3909781581 18982.50354146303 20192.87933787117 22140.992815232654 21031.06233504824 21244.04611812375 18096.499612238746 1.0166621590781548 1.0700614098387622 1.1658867736958078 1.1318579765492653 1.1211776538505982 1.048959961772114 1.1158444876386278 1.2234958853732463 1.1621618979189121 1.1739312338479153 1.0 14.143423044789404 -10.875159500301658 1.1707940197274447 1.0011963538791606 1.1219903476805029 0.0 0.07459057948084889 0.40531641968911775 1.0019830969874948 0.03855705891195639 0.00969969733708224 1.3330317689821053e-11 10.875159500301658 0.12079399380134226 KVQDGLS(ph)DIAEK ddPTM_A549_PD325901_60min_R1 1 KVQDGLSDIAEK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 KVQDGLS(1)DIAEK 51.695 0.035367 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVQFDGTNS(ph)AFK ddPTM_A549_MK2206_60min_R1 2 KVQFDGTNSAFK 12 1 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 KVQFDGT(0.045)NS(0.955)AFK;KVQFDGT(0.025)NS(0.975)AFK 78.285 0.00041852 8462000.0 5251.700000000001 6135.3 6018.799999999999 5322.7 7523.7 6836.1 5920.3 6027.700000000001 8380.7 8221.9 7955.6 True False 6138.058568262397 6447.560564014909 6872.356344017316 6626.761738945086 6416.973696585123 7559.49156456408 6995.941876395531 6882.144934057053 6482.484831227852 6364.567079642457 5980.004956609945 1.026430347934369 1.0781864916162243 1.1492225163494252 1.108153218438432 1.073071635081536 1.2641279763837425 1.169888976206053 1.1508594029591792 1.0840266652392143 1.0643079940272357 1.0 12.545930964883732 -9.661889411431908 0.9895615738505309 1.0146285263214148 1.1281487525722245 0.24005218190205135 0.06142714880340488 0.36795327873682804 0.7493330370296096 0.01920904731054915 0.012571321813850945 2.178264374081907e-10 9.661889411431908 0.11352022625080971 KVQFDGTNS(ph)AFK ddPTM_A549_PD325901_60min_R1 2 KVQFDGTNSAFK 12 1 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 KVQFDGT(0.153)NS(0.847)AFK;KVQFDGT(0.01)NS(0.99)AFK 113.59 1.3255e-05 15846100.0 8958.8 8481.099999999999 9626.7 8215.3 10147.8 10416.0 10027.2 10642.6 12379.8 9818.400000000001 9815.8 True False 9868.290780880012 9195.832061423034 10280.025752049783 8722.740422699982 9435.05353600949 10331.175549413789 10408.79058309438 10430.324994041817 11859.520057914173 9198.46454838137 8608.518827482894 1.1463401519638043 1.0682246557985247 1.1941689340598949 1.0132684376378933 1.0960135796982708 1.2001106992333308 1.2091267721764256 1.2116282955370632 1.3776493140785593 1.0685304560193398 1.0 13.071549315075234 -7.25918569480363 23.265971249346837 1.189188334595959 1.1016505111949186 0.11802436303207575 0.09835268642718233 160.23273443285794 1654145.8036838288 0.02053753321431587 0.03448682570105128 5.505722334474307e-08 7.25918569480363 -0.08753782340104044 KVQIPVSRPDPEPVS(ph)DNEEDSYDEEIHDPR ddPTM_A549_MK2206_60min_R1 2 KVQIPVSRPDPEPVSDNEEDSYDEEIHDPR 30 2 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KVQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;KVQIPVS(0.027)RPDPEPVS(0.972)DNEEDS(0.001)Y(0.001)DEEIHDPR 129.56 4.8791e-28 48977000.0 1840.4899999999998 2263.7 2036.6399999999999 1711.59 2488.65 2229.93 1523.3400000000001 2017.94 3182.2 3066.0 2944.6 True False 2151.119716339712 2378.912660955545 2325.466176726164 2130.929626836196 2122.5728816947194 2465.899712492265 1800.1111595676534 2303.9891746820663 2461.43678092919 2373.388470570521 2213.374553174323 0.9718733384978481 1.0747899209123077 1.0506428626782052 0.962751479987927 0.9589759124367903 1.1140905677061217 0.8132880885370325 1.0409395786076008 1.1120742205150533 1.0722940982432065 1.0 11.112031893181705 -8.501156700394946 24.975889702349644 1.054165158447365 0.9948112548878537 0.1373767431506494 0.07754535394156606 1342.535800125848 1543642.5452739354 0.013075926750085749 0.015732431460553704 3.1538664525945063e-09 8.501156700394946 -0.05935390355951131 KVQIPVSRPDPEPVS(ph)DNEEDSYDEEIHDPR ddPTM_A549_PD325901_60min_R1 4 KVQIPVSRPDPEPVSDNEEDSYDEEIHDPR 30 2 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KVQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;KVQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;KVQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;KVQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR 239.86 4.949099999999998e-121 194793000.0 6374.5 7884.4 8147.699999999999 7634.099999999999 8213.2 8639.5 7804.5 8394.699999999999 8010.200000000001 7363.7 8190.900000000001 True False 7021.63454734112 8548.846058304207 8700.651918100282 8105.641018700957 7636.333166001811 8569.142776417099 8101.50451828627 8227.261122985245 7673.559150220852 6898.7547253030925 7183.471226393121 0.9774709643915063 1.1900717339681823 1.2112043946292732 1.1283738408973714 1.0630422152934655 1.1928972089333105 1.127798005025782 1.1453043888805579 1.0682243874002135 0.9603650530339791 1.0 12.81046544221099 -9.295804050850967 0.9271239767297382 1.013984517809801 1.1352617367365734 0.4079731984906172 0.06541759339676717 0.34810878394536937 0.633916266817849 0.016847637866510678 0.013277614124874437 5.06052936318372e-10 9.295804050850967 0.12127721892677235 KVQIPVSRPDPEPVSDNEEDS(ph)YDEEIHDPR ddPTM_A549_PD325901_60min_R1 1 KVQIPVSRPDPEPVSDNEEDSYDEEIHDPR 30 2 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KVQIPVSRPDPEPVSDNEEDS(0.997)Y(0.003)DEEIHDPR 102.42 5.8354e-15 8138800.0 1094.7 1161.4 1354.5 1184.0 1246.7 1396.5 1246.4 943.28 1267.9 1252.0 1670.1 True False 1205.833138124453 1259.2752539336548 1446.4245152701778 1257.1329909409005 1159.1360928815138 1385.1273670081 1293.8324340562508 924.4655404111554 1214.6145722410201 1172.9485063323432 1464.6882876361767 0.8232694617026783 0.859756485092106 0.9875306080343728 0.8582938783307645 0.7913875618901918 0.9456806466606775 0.88335002401387 0.631168794217046 0.8292648903482773 0.8008178369647067 1.0 10.516377950175903 -10.638515021615575 1.06252384210725 0.9947016452697753 0.8477148911277202 0.0 0.10351331425198118 0.498717160217914 1.0532849371677124 0.05010801547473876 0.015579302647205792 2.298714198702324e-11 10.638515021615575 -0.1469867541420551 KVQS(ph)TADIFGDEEGDLFKEK ddPTM_A549_MK2206_60min_R1 1 KVQSTADIFGDEEGDLFKEK 20 2 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;Q9Y4E1-5 J3KP36 FAM21C WASH complex subunit FAM21C 1 KVQS(0.86)T(0.14)ADIFGDEEGDLFKEK 87.102 1.0703e-06 1771200.0 1518.0 1388.4 1412.1 1451.5 1811.4 1577.7 1223.0 1186.4 1933.4 1509.0 1588.1 True False 1774.2012884632254 1459.0636296641244 1612.3570135885639 1807.11756516031 1544.9454595470709 1744.651166807498 1445.2032692315831 1354.5758331976197 1495.4879870053724 1168.115851953984 1193.7309406697495 1.4862656466521673 1.2222717699228842 1.3506871260989028 1.5138399312548743 1.294215812719297 1.4615112228126144 1.2106608114059132 1.1347413282574608 1.2527848077442982 0.9785419914630059 1.0 10.221261983656971 -10.388838087268908 0.22214118399451824 0.8229072079955949 1.4306268102652946 0.6774690707773618 0.09864346208384203 2.540404397679479 0.2083944920948703 0.45038509653085923 0.11128898978343915 4.084716434650581e-11 10.388838087268908 0.6077196022696997 KVQVAALQAS(ph)PPLDQDDR ddPTM_A549_MK2206_60min_R1 2 KVQVAALQASPPLDQDDR 18 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IU26;B1AN86;U3KQJ2 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 KVQVAALQAS(1)PPLDQDDR;KVQVAALQAS(1)PPLDQDDR 128.98 7.8515e-13 22324000.0 5068.799999999999 5979.0 5542.1 5674.5 6981.3 6360.2 5640.6 6595.0 8874.3 6172.7 7841.2 True False 5924.289519738072 6283.305561626185 6328.053115933139 7064.752754737982 5954.360018072188 7033.232142440931 6665.424006890981 7529.861446340441 6864.2852193450835 4778.282782873666 5894.013633889322 1.0051367179869877 1.0660486982077066 1.0736407326152393 1.198631899002941 1.0102385891739183 1.1932839961552424 1.1308803170332375 1.2775439478194186 1.1646198406934296 0.8107010060851504 1.0 12.525034682335022 -5.449889601763804 1.825275761735688 1.107447970035359 0.9945333418854045 0.04103243721072125 0.11996234729408192 1.1380376060119022 5.060123225802172 0.01333230740870885 0.19234305530364093 3.5490359473476358e-06 5.449889601763804 -0.11291462814995445 KVQVAALQAS(ph)PPLDQDDR ddPTM_A549_PD325901_60min_R1 2 KVQVAALQASPPLDQDDR 18 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IU26;B1AN86;U3KQJ2 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 KVQVAALQAS(1)PPLDQDDR;KVQVAALQAS(1)PPLDQDDR 137.38 2.1525e-13 55718000.0 8234.1 8875.4 9009.7 9078.7 11318.9 10210.9 8850.2 10156.1 10220.8 9125.2 10538.2 True False 9070.019770375955 9623.361106219007 9621.152421727369 9639.470679776321 10523.899512085163 10127.745815813107 9186.999204015268 9953.528618193675 9791.25531978943 8549.03331468363 9242.068207153798 0.9813842061190731 1.0412562308044935 1.0410172491780727 1.0429993009914074 1.1386952872668876 1.0958311049872747 0.9940414848815006 1.0769806492543708 1.0594225340395709 0.9250130082427084 1.0 13.174000021403002 -5.2608869488053385 5.700584326143574 1.0430588383692798 0.9793727723741931 0.09386929715051695 0.053551565842334316 0.22784914015650948 30.936472266900264 0.006107636558620777 0.05607513187720648 5.484197054727552e-06 5.2608869488053385 -0.06368606599508675 KVS(ph)IVSK ddPTM_A549_MK2206_60min_R1 1 KVSIVSK 7 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KVS(0.998)IVS(0.002)K 67.334 0.0098704 9743400.0 4375.6 5274.5 4720.6 4781.1 5326.7 4454.4 4311.4 4178.4 5519.8 4956.1 4499.2 True False 5114.094306850915 5542.94952078898 5390.052063130219 5952.469714631732 4543.149486236822 4925.761651408582 5094.725572334462 4770.700995813328 4269.574113309329 3836.5135678390616 3381.9244683970373 1.512184661319444 1.6389927015183234 1.5937825085978319 1.760083576749152 1.343362197675036 1.4564966478223247 1.5064575273466287 1.4106468197010154 1.262468796452163 1.134417283321969 1.0 11.723628723745918 -9.025452286942672 0.3649769349427106 0.9664728266708841 1.6363355074810269 0.7807017968913755 0.09982581701052477 0.2980649279657188 0.10825169838155303 0.07110572261204254 0.051840052452427454 9.430782155238665e-10 9.025452286942672 0.6698626808101428 KVS(ph)IVSK ddPTM_A549_PD325901_60min_R1 2 KVSIVSK 7 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KVS(1)IVSK;KVS(1)IVSK 77.37899999999999 0.007216299999999999 13747000.0 6374.3 6329.1 6739.5 6721.0 7630.1 7593.2 8493.8 7875.799999999999 9660.599999999999 12340.3 11494.5 True False 7021.414243488356 6862.475468978383 7196.882997905771 7136.140905501516 7094.188098416013 7531.363496717437 8817.0362069857 7718.71099055442 9254.59857764145 11561.131351991227 10080.74936963896 0.6965170927307587 0.6807505292857173 0.7139234132316818 0.707897859954145 0.7037361845124507 0.7471035357153385 0.8746409501599861 0.7656882149854366 0.9180466886235962 1.1468523745675951 1.0 13.299315267561662 -8.435221257191381 0.5008471722706404 0.9946399552789734 0.6801532306502315 0.8302547667959631 0.05979347399370677 0.1491131891230853 0.08577875352702943 0.012224488242351738 0.015143785473318227 3.6709523122442508e-09 8.435221257191381 -0.31448672462874194 KVS(ph)IVSKPVLYR ddPTM_A549_MK2206_60min_R1 4 KVSIVSKPVLYR 12 2 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KVS(0.999)IVS(0.001)KPVLYR;KVS(0.999)IVS(0.001)KPVLYR;KVS(0.995)IVS(0.004)KPVLYR;KVS(0.796)IVS(0.183)KPVLY(0.021)R 92.977 5.4573e-05 70402600.0 20355.8 20781.9 20442.7 19256.399999999998 26625.100000000002 20372.199999999997 18737.5 19054.9 26653.300000000003 24736.300000000003 23063.1 True False 23791.361388471487 21839.6099433282 23341.782254576137 23974.21886445264 22708.5830600567 22527.97268202809 22141.861207871454 21755.99042818384 20616.370106574086 19148.352649893535 17335.895760821415 1.372375660116694 1.2597912588217701 1.3464422361910966 1.382923570562395 1.309916913054899 1.2994986237134978 1.2772262543197435 1.2549677690928265 1.189230160991533 1.104549364744579 1.0 14.081474763324515 -9.549929283981678 0.40313324663089795 0.9772406777280909 1.3472252367564586 0.8545414211878377 0.042406927531645044 0.19563221857610147 0.072543799606128 0.028588642015051496 0.013127428736982291 2.818841884934278e-10 9.549929283981678 0.3699845590283677 KVS(ph)IVSKPVLYR ddPTM_A549_PD325901_60min_R1 2 KVSIVSKPVLYR 12 2 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KVS(0.988)IVS(0.009)KPVLY(0.003)R;KVS(0.969)IVS(0.025)KPVLY(0.006)R 81.346 0.00015241 33974000.0 9001.9 9564.5 9576.9 9806.2 11749.3 12311.3 12881.3 12907.0 19090.7 19335.7 18357.8 True False 9915.766261151475 10370.533981615674 10226.846024578052 10411.906702503942 10924.069700884562 12211.040854598503 13371.50492041782 12649.559759654381 18288.384268697544 18114.840602148797 16099.906979682288 0.6158896615778553 0.6441362670419803 0.6352114976492781 0.646706016105778 0.6785175662611272 0.7584541246113133 0.8305330544637526 0.7856914810512778 1.1359310517617938 1.1251518797598836 1.0 13.974764732464575 -8.21160767963778 1.1165387366164061 1.063332830020712 0.6483560588757968 0.8713070497375934 0.06709207191704734 0.1199507040041949 0.2929945631875619 0.014669567255794068 0.019732896977810426 6.1431669820033965e-09 8.21160767963778 -0.41497677114491527 KVS(ph)KQEEASGGPTAPK ddPTM_A549_PD325901_60min_R1 2 KVSKQEEASGGPTAPK 16 2 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 KVS(1)KQEEASGGPTAPK;KVS(0.985)KQEEAS(0.015)GGPTAPK 116.21 3.3577e-08 17264200.0 2792.8999999999996 2880.1000000000004 2428.7 2425.8 3580.6 3225.1 3637.1000000000004 3419.4 3617.5 4030.3999999999996 3768.1000000000004 True False 3076.433151975688 3122.816134711831 2593.5261869595306 2575.6361566084774 3329.1110083994167 3198.8358548784972 3775.5118307974876 3351.197384532593 3465.4690551951157 3775.9198561676317 3304.64758795394 0.9309413697211962 0.9449770517422438 0.7848117289157912 0.7793981318907209 1.0074027319992156 0.9679809328349728 1.1424854633698118 1.0140861605783127 1.0486652397754606 1.1426089335309362 1.0 11.690280713665947 -6.865342067219818 6.823652809959977 1.0275839886205864 0.8612197461448486 0.6061482705022314 0.07129478359094886 0.1123171812354942 6.530931231058236 0.00920074792556068 0.017507211334439516 1.363508761019507e-07 6.865342067219818 -0.16636424247573778 KVS(ph)LFGK ddPTM_A549_MK2206_60min_R1 2 KVSLFGK 7 1 I3L4G3;O14777 I3L4G3 NDC80 Kinetochore protein NDC80 homolog 1 KVS(1)LFGK;KVS(1)LFGK 57.598 0.014547999999999998 3439700.0 1970.05 2664.5 2519.0 1792.77 3374.8 2730.9 1991.52 2634.6000000000004 3797.7 3491.1 2981.8999999999996 True False 2302.5462769018295 2800.1116690003323 2876.2320779191255 2231.9987304805036 2878.3713905705263 3019.8820253752933 2353.3534053475723 3008.062618124114 2937.527013680721 2702.4580853257476 2241.4119337466927 1.0272749253426816 1.2492624077001901 1.2832233266070294 0.9958003242846779 1.2841777752825232 1.347312370344762 1.0499423911845427 1.3420391730920722 1.3105698999159063 1.205694519886124 1.0 11.130192100917577 -10.941440074037486 1.2213520569783596 1.0008847657574311 1.2211196653268592 0.003797877530681948 0.13579790775965644 0.44991323462413163 1.2006116041483472 0.08184267685051919 0.01949388778366917 1.1443527720148993e-11 10.941440074037486 0.2202348995694281 KVS(ph)LFGK ddPTM_A549_PD325901_60min_R1 2 KVSLFGK 7 1 I3L4G3;O14777 I3L4G3 NDC80 Kinetochore protein NDC80 homolog 1 KVS(1)LFGK;KVS(1)LFGK 56.258 0.015911 9224500.0 3445.1 3863.3999999999996 4302.6 4369.2 4852.8 4701.9 4556.0 4621.1 4760.5 4370.299999999999 4404.5 True False 3794.8440158514245 4188.982276603478 4594.600309635639 4639.075560826843 4511.956069251156 4663.609285309979 4729.381073138859 4528.928535317181 4560.432740084685 4094.3585121599335 3862.7744224259227 0.9824140891634474 1.0844491079478278 1.1894560249133344 1.2009698350216844 1.168060977896175 1.2073211571027 1.2243482419479947 1.172454831693976 1.1806106806569914 1.0599527863676208 1.0 11.915421714458244 -10.685834158896158 0.9117617469443168 0.9984434270440573 1.1614259464078014 0.331351774996975 0.06742179517993276 0.4520849761658752 0.6585502457594814 0.04893164460062707 0.012408755284689484 2.061416942372148e-11 10.685834158896158 0.16298251936374408 KVS(ph)LVLEK ddPTM_A549_PD325901_60min_R1 1 KVSLVLEK 8 1 Q9P2M7-2;Q9P2M7;H0Y4A8 Q9P2M7-2 CGN Cingulin 1 KVS(1)LVLEK 63.473 0.004130399999999999 2273500.0 1816.1 1823.3 2062.8 1768.0 2701.4 1747.1 1742.6 2323.7 2272.2 2243.9 2159.2 True False 2000.4691350578419 1976.9558898719065 2202.7940126240846 1877.2053445806698 2511.6629833240727 1732.8721968491584 1808.915596587308 2277.351980592616 2176.7073357883473 2102.2197710536307 1893.632088296528 1.056419115107741 1.0440021068983547 1.163263986831609 0.9913252717793585 1.326373269045896 0.9151050024759636 0.9552624333772094 1.2026369824780876 1.1494879862045788 1.1101521694981118 1.0 10.886940343055764 -11.045703591075483 1.3859380593950836 1.0006515562079543 1.0956835828805869 0.0 0.11703021080852472 0.8632957517957761 2.9896129214292086 0.07478078480345066 0.017210000525114025 9.001117042675723e-12 11.045703591075483 0.09503202667263255 KVS(ph)PASGVSK ddPTM_A549_PD325901_60min_R1 2 KVSPASGVSK 10 1 Q9UNY4-2;Q9UNY4 Q9UNY4-2 TTF2 Transcription termination factor 2 1 KVS(0.913)PAS(0.086)GVS(0.001)K;KVS(0.868)PAS(0.132)GVSK 80.507 0.00049528 25822000.0 12422.8 12682.7 12479.2 11502.6 14163.599999999999 14078.7 14104.4 13150.5 14105.099999999999 14068.1 14254.900000000001 True False 13683.953510817997 13751.515638939514 13326.113555525744 12213.089477700012 13168.797597767398 13964.047734978107 14641.15066022382 12888.202961132318 13512.31169880654 13179.837765123033 12501.637669256284 1.094572876997486 1.0999771392156803 1.0659494306331554 0.9769191685769407 1.0533658026381436 1.116977479623981 1.171138617801168 1.0309211722578286 1.0808433307930272 1.0542489003288393 1.0 13.609829474641462 -10.640407364036811 0.7814949627503429 0.9969236159820535 1.0766100578246007 0.09644614970454957 0.049334954813007495 0.835856381183915 0.853942668615454 0.040892147761429694 0.009436456738714991 2.288719848464026e-11 10.640407364036811 0.07968644184254725 KVS(ph)SAEGAAK ddPTM_A549_MK2206_60min_R1 3 KVSSAEGAAK 10 1 P05114;A6NL93;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 KVS(0.978)S(0.022)AEGAAK;KVS(0.96)S(0.04)AEGAAK;KVS(0.988)S(0.012)AEGAAK 87.363 0.00054558 24046700.0 6721.799999999999 6687.6 5924.34 5871.9800000000005 7811.599999999999 6261.280000000001 5918.8 6416.200000000001 8572.4 7248.599999999999 7930.700000000001 True False 7856.275507768186 7027.9702749508815 6764.500495632941 7310.615363603203 6662.523987963947 6923.844493698712 6994.169345811851 7325.715998788403 6630.765087309845 5611.136225628663 5961.288313814985 1.3178821580499074 1.1789348048581907 1.134738019625146 1.2263482285634837 1.1176315650635256 1.1614678118575563 1.1732647336655764 1.228881344626702 1.1123040420546983 0.9412623463664956 1.0 12.54140843466138 -14.999999999999993 0.10728573001389445 0.36670598446903324 1.2934010450815612 0.7104382279173511 0.053864833770902266 41.004174497601575 0.31290237985909397 5.620853401539289 0.28447918199980277 1.0000000000000164e-15 14.999999999999993 0.9266950606125279 KVS(ph)SAEGAAK ddPTM_A549_PD325901_60min_R1 3 KVSSAEGAAK 10 1 P05114;A6NL93;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 KVS(0.864)S(0.136)AEGAAK;KVS(0.931)S(0.069)AEGAAK;KVS(0.986)S(0.014)AEGAAK 93.494 0.0002501 56188400.0 14506.5 13820.4 14521.2 14603.98 17056.600000000002 14152.4 15086.699999999999 16162.899999999998 16289.6 17823.4 18444.1 True False 15979.189200879126 14985.09361069802 15506.695955069265 15506.034676554977 15858.603258075585 14037.147546613263 15660.832624259008 15840.518279950244 15605.004760609912 16698.027482239537 16175.592626783062 0.9878580383151627 0.9264015208868547 0.9586477795808076 0.9586068983265904 0.9804032299760929 0.8677980380991405 0.9681767453965346 0.979285188829619 0.9647253810516724 1.0322977258089105 1.0 13.981530948896063 -9.794069641433776 0.5497014217408229 0.9994721557762428 0.9497338940384717 0.31901459941890475 0.03313934766960592 0.8776762815827431 0.5531687841410995 0.019181183169247506 0.008012575407217835 1.6066835920815554e-10 9.794069641433776 -0.04973826173777107 KVS(ph)SAEGAAKEEPK ddPTM_A549_MK2206_60min_R1 4 KVSSAEGAAKEEPK 14 2 P05114;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 KVS(0.941)S(0.059)AEGAAKEEPK;KVS(0.969)S(0.031)AEGAAKEEPK;KVS(0.5)S(0.5)AEGAAKEEPK;KVS(0.971)S(0.029)AEGAAKEEPK 99.021 1.1987e-05 63389100.0 9832.9 10260.9 10406.500000000002 8245.8 12944.599999999999 8401.5 8641.3 7867.700000000001 12618.5 14001.7 13491.5 True False 11492.453128675927 10783.13598215256 11882.298181367754 10266.02137016803 11040.466487607935 9290.541153535654 10211.312355201042 8982.970568820721 9760.429897603859 10838.706245397017 10141.18820354255 1.133245227089006 1.0633010418232614 1.1716869801525815 1.0123095207504258 1.0886758302889248 0.9161195874749919 1.006914786536946 0.8857907366005459 0.9624542708116113 1.0687807018127136 1.0 13.307939076755645 -6.840439637073207 1.5059765043154176 0.9723783831886349 1.1118820568304977 0.4916875237186208 0.05958266752898913 0.2022594356046448 0.9214554050576016 0.007510048675448668 0.018386135226426945 1.4439772898668757e-07 6.840439637073207 0.13950367364186278 KVS(ph)SAEGAAKEEPK ddPTM_A549_PD325901_60min_R1 4 KVSSAEGAAKEEPK 14 2 P05114;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 KVS(0.5)S(0.5)AEGAAKEEPK;KVS(0.984)S(0.016)AEGAAKEEPK;KVS(0.5)S(0.5)AEGAAKEEPK;KVS(0.535)S(0.465)AEGAAKEEPK 122.57 3.1901999999999995e-07 89307700.0 14074.0 12845.2 12548.6 14011.3 16724.0 16145.5 16055.4 16492.8 17598.3 17953.3 19310.300000000003 True False 15502.782119268808 13927.710084233318 13400.223456861846 14876.746179028914 15549.363934667876 16014.016401023471 16666.397032851983 16163.838165648694 16858.704650736745 16819.725574070653 16935.255518077276 0.9154147159291812 0.8224092083739982 0.7912619589682591 0.8784482857757275 0.9181652983074243 0.9456022900823408 0.984124332524047 0.9544490278516823 0.9954797925984159 0.9931781398938266 1.0 14.047742133838382 -7.138200791846215 1.0995444848276947 0.9946056496887846 0.8398790378824648 0.7839810043164519 0.031552100885321496 0.14501618716074965 0.34441566192926654 0.00509397583114213 0.011996024360682872 7.274434003676048e-08 7.138200791846215 -0.15472661180631986 KVS(ph)STPPVR ddPTM_A549_MK2206_60min_R1 1 KVSSTPPVR 9 1 Q9H6A9;Q9H6A9-2 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 KVS(0.393)S(0.393)T(0.215)PPVR 59.84 0.0035374000000000004 9051400.0 2532.1 3328.8 2696.2 2731.7 4341.2 2733.8 2886.7 2914.4 4229.1 4381.7 4483.7 True False 2959.4565760986384 3498.2217015456204 3078.5617024555536 3400.9666226306713 3702.615230752867 3023.088901450429 3411.1760239499667 3327.525124975677 3271.2156024849596 3391.870926777188 3370.273546175274 0.8781057488514996 1.037963730129724 0.9134456477425201 1.0091069985966656 1.09860970631145 0.8969862119593098 1.0121362486499383 0.9873160381156272 0.9706083371770432 1.00640819811983 1.0 11.718649976275328 -5.243866322731401 23.94852065617363 0.9883631970189882 0.8781055857447116 0.280210511937793 0.052526817986056 1934.4966668265472 2636253.9296770734 0.006381878226200544 0.25567926653550804 5.703397977295545e-06 5.243866322731401 -0.11025761127427658 KVS(ph)TSGQIR ddPTM_A549_MK2206_60min_R1 2 KVSTSGQIR 9 1 A0A087WZ02;C9JY42;A0A096LNI6;Q86XP1-2;Q16760;Q86XP1 A0A087WZ02 DGKH;DGKD Diacylglycerol kinase eta;Diacylglycerol kinase delta 1 KVS(0.802)T(0.073)S(0.125)GQIR;KVS(0.936)T(0.05)S(0.015)GQIR 68.536 0.0035509 12436200.0 4601.1 3854.5 3399.8 3124.4 4091.9 3200.4 3302.7 3163.0 4233.4 4604.4 4891.9 True False 5377.653193905233 4050.677586099373 3881.9427624094646 3889.8781402596474 3489.9869305071525 3539.0642037464145 3902.7578391587476 3611.3649362812466 3274.5416593506516 3564.2628421053205 3677.1062204284026 1.462468819646637 1.1015938467035764 1.0557059083153701 1.0578639579811908 0.9491123512065829 0.9624590619887218 1.0613666304978417 0.9821214617674284 0.8905213673618463 0.9693119068205935 1.0 11.844355136882356 -2.000000000188956 0.735699942252217 0.9603481322522661 80.07284417631499 0.8912224407858504 0.04765053119199661 80.75243227101251 0.3453978943137313 0.008908786028235435 10579.801368455544 0.009999999995649128 2.000000000188956 79.11249604406272 KVS(ph)TSGQIR ddPTM_A549_PD325901_60min_R1 3 KVSTSGQIR 9 1 A0A087WZ02;C9JY42;A0A096LNI6;Q86XP1-2;Q16760;Q86XP1 A0A087WZ02 DGKH;DGKD Diacylglycerol kinase eta;Diacylglycerol kinase delta 1 KVS(0.936)T(0.052)S(0.013)GQIR;KVS(0.948)T(0.048)S(0.004)GQIR;KVS(0.913)T(0.079)S(0.008)GQIR 77.597 0.00079472 63420600.0 8378.9 8090.799999999999 8635.0 8330.7 10310.099999999999 8943.699999999999 9258.5 9346.8 9554.4 9476.6 10112.1 True False 9229.519759779832 8772.640110665074 9221.023026473227 8845.268418607573 9585.954143914088 8870.86547247428 9610.8372839456 9160.37074157725 9152.861794321 8878.245858713326 8868.375805883348 1.0407226714114775 0.9892048220199732 1.0397645779011677 0.9973944059451737 1.0809142907041325 1.000280735350579 1.083720119028977 1.0329254129600811 1.0320787024213522 1.0011129493208248 1.0 13.11445419174107 -4.957205865493544 18.13166209007492 1.0229538843544188 1.146782854611065 0.011546646172840958 0.03137384864749063 8261.29047210919 17072.027160033453 0.003973007048123161 36759.702087790174 1.1035553854672522e-05 4.957205865493544 0.12382897025664619 KVS(ph)VSESNVLLDEEVLTDPK ddPTM_A549_MK2206_60min_R1 1 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.803)VS(0.113)ES(0.084)NVLLDEEVLTDPK 127.83 4.8235e-17 33193000.0 1499.2 1396.4 1008.5 1105.6 1962.9 1603.2 1375.6 1242.1 2016.6 1886.6 2200.1 True False 1752.228308079096 1467.470795493362 1151.5204647008488 1376.4720496322707 1674.1600102379068 1772.849559881969 1625.5287139451889 1418.1714787717156 1559.8433198484709 1460.4157496993948 1653.754450329018 1.0595456343174081 0.8873571256007236 0.6963067972223757 0.8323315770115802 1.0123389297031546 1.072014989606986 0.982932329295795 0.8575465834662258 0.9432133770150318 0.8830910474096333 1.0 10.691529323529737 -6.757703611770675 24.992267812874307 0.9743237163347629 0.8578776542849414 0.17659124956744254 0.09674100667039016 105.30601297249194 704486.5065083699 0.013541663167462609 0.027357643978963453 1.7470140118194148e-07 6.757703611770675 -0.11644606204982144 KVS(ph)VSESNVLLDEEVLTDPK ddPTM_A549_PD325901_60min_R1 1 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.984)VS(0.016)ESNVLLDEEVLTDPK 179.16 1.7039000000000002e-35 86000000.0 2014.6 1625.4 1662.1 1403.3 2180.6 1731.7 1647.1 2160.2 1852.9 2153.6 2585.9 True False 2219.1207089298664 1762.378162341796 1774.9001010192433 1489.9786538744645 2027.4421786616101 1717.5976093433057 1709.781291827703 2117.1131163558825 1775.029056633318 2017.621328464325 2267.850693370688 0.9785127016592108 0.7771138406481194 0.782635341121696 0.6570003299731877 0.8939927944058078 0.7573680288407586 0.7539214538354237 0.9335328478830476 0.7826922036014227 0.8896623284602351 1.0 11.147109946536492 -10.946849104694474 0.6062860666098266 1.042557381375349 0.8032747602523274 0.1929621247077582 0.09267702909814833 1.0398919330979473 0.47906848723088485 0.14266843056237236 0.01725059172567772 1.1301885296540957e-11 10.946849104694474 -0.23928262112302168 KVS(ph)YSHIQSK ddPTM_A549_MK2206_60min_R1 1 KVSYSHIQSK 10 1 E7EVA0;P27816-4;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KVS(0.477)Y(0.045)S(0.477)HIQSK 44.61600000000001 0.012071 1618500.0 1115.3 1344.4 1408.9 1014.6 1401.9 1250.7 1117.6 1034.2 1785.5 1750.1 1471.8 True False 1303.5353735329616 1412.8242176033204 1608.703205470526 1263.1770455471242 1195.6823670857004 1383.0482438525319 1320.6534535512806 1180.8010171046683 1381.087100857606 1354.7511945027616 1106.3114403864597 1.1782716204015815 1.2770583092856644 1.4541142274625394 1.1417915420867994 1.0807827917498725 1.250143669642792 1.19374473167334 1.06733147104778 1.2483709834684171 1.2245658365690553 1.0 10.11154186395214 -14.828768894440246 0.21538654609226132 1.467361607538069e-12 1.2502792365170567 0.0 0.11810450670587037 33.504627023617545 0.43601270074227994 14.26210068648142 0.07383239511513337 1.4833072025831285e-15 14.828768894440246 1.2502792365155895 KVS(ph)YSHIQSK ddPTM_A549_PD325901_60min_R1 2 KVSYSHIQSK 10 1 E7EVA0;P27816-4;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KVS(0.498)Y(0.005)S(0.498)HIQSK;KVS(0.858)Y(0.001)S(0.142)HIQSK 66.498 0.0011113 6759200.0 4224.3 4004.4 3758.0 3348.9 4518.9 4074.4 4083.1 4324.5 4065.9 4313.0 4628.9 True False 4653.1478262347 4341.864841443023 4013.0404786897952 3555.7539470962683 4201.508053358689 4041.219437263017 4238.484604858049 4238.244454995377 3895.024362548118 4040.676443938817 4059.574645014724 1.1462156095464093 1.0695368902195108 0.9885371817507842 0.8758932297162803 1.0349626305106283 0.9954785391680757 1.044071109780684 1.0440119533705494 0.9594661271548046 0.9953447829567281 1.0 11.987112856979996 -5.537394028079567 2.797836145145229 0.9869230845179727 1.1423956228258385 0.5172063064576096 0.04512410375962611 0.1667991387368128 2.3802984522622284 0.006342503454838715 0.044069364180708094 2.9013890784295116e-06 5.537394028079567 0.15547253830786578 KVSGTLDT(ph)PEK ddPTM_A549_MK2206_60min_R1 5 KVSGTLDTPEK 11 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 KVSGT(0.007)LDT(0.993)PEK;KVSGT(0.006)LDT(0.994)PEK;KVS(0.015)GT(0.061)LDT(0.924)PEK;KVS(0.019)GT(0.011)LDT(0.969)PEK;KVS(0.178)GT(0.194)LDT(0.628)PEK 116.58 1.17e-05 136291000.0 12440.3 14221.199999999999 15509.099999999999 12885.099999999999 19923.2 16487.3 14695.8 17245.5 21188.4 17033.1 20368.5 True False 14539.918503866309 14944.998336343599 17708.523588588927 16041.950078434113 16992.52367210345 18231.97514261602 17365.836634483647 19690.102437128746 16389.261230922028 13185.31087999828 15310.4393079981 0.9496735012868458 0.9761312550017035 1.1566306643688584 1.0477785617852178 1.1098651926484329 1.190819856690312 1.1342480960302568 1.2860573129892314 1.0704631592354346 0.8611974231928367 1.0 13.902228058754064 -3.9373637121275236 12.592828000639491 1.0694632995522972 0.5664087047295685 0.0 0.11552230483054014 0.0 0.0 0.013670340974030127 0.0 0.00011551444287993951 3.9373637121275236 -0.5030545948227287 KVSGTLDT(ph)PEK ddPTM_A549_PD325901_60min_R1 3 KVSGTLDTPEK 11 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 KVS(0.001)GT(0.016)LDT(0.983)PEK;KVS(0.009)GT(0.036)LDT(0.955)PEK;KVSGTLDT(1)PEK 124.5 2.9656e-06 192973200.0 20127.0 20187.4 19625.0 19760.600000000002 21943.7 19280.5 21600.100000000002 22241.399999999998 17386.3 22598.6 21613.7 True False 22170.278223285724 21888.66304568645 20956.870514711874 20981.167382421252 20402.45021365532 19123.48600042939 22422.10362552824 21797.777828959246 16655.614273486888 21171.720539298793 18955.35192053292 1.1696052025955959 1.1547484392508742 1.105591212580488 1.1068730071792503 1.0763424651353934 1.0088700057166622 1.1828903899821583 1.1499537397323305 0.8786760775169308 1.1169257436136042 1.0 14.210317621037936 -8.75523406844029 24.999989583159724 0.9427081455327605 1.11666464116621 0.2691484116634629 0.07443448587333566 70.28771665357145 283175.217788423 0.010734823912275988 0.012025423134911282 1.7569764143259993e-09 8.75523406844029 0.1739564956334495 KVSGTLDT(ph)PEKTVDSQGPTPVCTPTFLER ddPTM_A549_MK2206_60min_R1 2 KVSGTLDTPEKTVDSQGPTPVCTPTFLER 29 2 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 KVS(0.011)GT(0.008)LDT(0.975)PEKT(0.006)VDSQGPTPVCTPTFLER;KVS(0.002)GT(0.004)LDT(0.994)PEKTVDSQGPTPVCTPTFLER 224.51 1.4958e-104 45795000.0 6110.0 7099.4 6271.6 6655.2 8823.0 6604.700000000001 6534.5 5642.7 9881.2 9411.9 9797.2 True False 7141.218624842099 7460.729136010866 7161.0071853424315 8285.724298763282 7525.148387757428 7303.604970154964 7721.734066061958 6442.570005044002 7643.123977033974 7285.7452531515655 7364.2848510356225 0.9697097232513822 1.0130962186995904 0.9723968219854228 1.1251227330781588 1.021843741785624 0.9917602479931061 1.0485382114158808 0.8748398704509641 1.0378637072898043 0.9893350679023487 1.0 12.846329715970837 -7.04397930536071 22.469623786744297 1.007278868249709 1.0233397205301922 0.018972241456259975 0.05778463925947313 647.5367786226444 330834.015089782 0.008334851915585922 0.014437564630354902 9.036925347010716e-08 7.04397930536071 0.016060852280483262 KVSGTLDT(ph)PEKTVDSQGPTPVCTPTFLER ddPTM_A549_PD325901_60min_R1 2 KVSGTLDTPEKTVDSQGPTPVCTPTFLER 29 2 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 KVSGT(0.001)LDT(0.996)PEKT(0.003)VDSQGPTPVCTPTFLER;KVSGT(0.002)LDT(0.997)PEKTVDSQGPTPVCTPTFLER 258.63 7.505799999999998e-139 97988000.0 13200.8 13827.3 17043.7 13084.900000000001 15520.8 14799.4 16153.7 16186.599999999999 12331.5 15205.7 17072.9 True False 14540.935498084658 14992.575097913565 18200.387974094017 13893.124555035978 14430.672551853213 14678.878593125437 16768.437893143826 15863.74556485795 11813.24993894639 14245.609506978999 14973.041534030091 0.9711410647620685 1.001304582227938 1.2155438113711867 0.9278759110806095 0.9637769666941612 0.9803538285634156 1.1199085940577427 1.0594871809313762 0.788967953645072 0.9514172170431895 1.0 13.87007969114986 -8.735388550105842 24.949801995990423 0.9003459507098474 1.030898006303339 0.2443453926922584 0.09040251819920767 227.4100000733643 217798.52310057034 0.0177779015298467 0.02015510380298249 1.8391258550569614e-09 8.735388550105842 0.1305520555934917 KVSIVS(ph)K ddPTM_A549_MK2206_60min_R1 1 KVSIVSK 7 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KVS(0.178)IVS(0.822)K 73.233 0.008015399999999999 8319300.0 4514.4 5766.9 5392.6 4319.1 6011.8 4387.0 4743.9 4480.7 6145.2 4638.4 5121.6 True False 5276.3203535167195 6060.410577578534 6157.35176791849 5377.279693891767 5127.472183783301 4851.229428145082 5605.805223963781 5115.852946568251 4753.322011867911 3590.5822184912918 3849.7653710309114 1.3705563443477589 1.5742285551172808 1.599409619674988 1.3967811478474101 1.331892125781743 1.260136387700426 1.4561420459924361 1.3288739581545719 1.23470434007126 0.9326755977156566 1.0 11.910554806218965 -9.487220042892211 0.2059584323898117 0.8239996890265137 1.5901512163716258 0.8029740289317743 0.08807418699298304 1.144516656243402 0.1429958192237188 0.2958597385341601 0.1551237706150358 3.256716519567276e-10 9.487220042892211 0.7661515273451122 KVSS(ph)AEGAAK ddPTM_A549_MK2206_60min_R1 2 KVSSAEGAAK 10 1 P05114;A6NL93;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 KVS(0.378)S(0.622)AEGAAK;KVS(0.049)S(0.951)AEGAAK 74.475 0.00067442 29282200.0 6728.0 7190.200000000001 6728.4 6472.7 7956.5 6442.2 6498.9 7890.5 8868.5 8707.2 9876.4 True False 7863.521916192738 7556.150468172708 7682.588294192554 8058.511790570543 6786.1093899118205 7123.909328013734 7679.666006875823 9009.002538642799 6859.798910084386 6740.23747258697 7423.817305226821 1.059228910530481 1.017825487549743 1.0348568638378994 1.085494356777457 0.9140997294119811 0.9596019184090193 1.0344632270878849 1.2135269724781494 0.924025824996349 0.9079207091803608 1.0 12.857945491883175 KVSS(ph)AEGAAKEEPK ddPTM_A549_MK2206_60min_R1 2 KVSSAEGAAKEEPK 14 2 P05114;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 KVS(0.083)S(0.917)AEGAAKEEPK;KVS(0.417)S(0.583)AEGAAKEEPK 82.007 8.389799999999999e-05 34273000.0 7607.200000000001 7894.200000000001 7336.6 6211.9 8625.6 6303.900000000001 6179.6 6782.2 9343.3 10727.599999999999 9859.6 True False 8891.109381816506 8295.981061145585 8377.04019962741 7733.815778862791 7356.785666263229 6970.974513809842 7302.353329961969 7743.597619616394 7227.057468184183 8304.227709358222 7411.189208883235 1.19968727436609 1.119385948371392 1.1303233480514143 1.0435323617959784 0.9926592695063302 0.9406013417461073 0.9853146538492349 1.044852236444689 0.9751548995027213 1.1204986777836639 1.0 12.855489342456638 -6.282324036202073 1.590976396779113 0.9883583132283142 1.1645914644385933 0.6044147445841688 0.04881182592171889 0.10358585528434656 0.4914172532522108 0.004147794397378215 0.015292940930492858 5.22006563641439e-07 6.282324036202073 0.17623315121027905 KVSS(ph)AEGAAKEEPK ddPTM_A549_PD325901_60min_R1 2 KVSSAEGAAKEEPK 14 2 P05114;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 KVS(0.154)S(0.846)AEGAAKEEPK;KVS(0.017)S(0.983)AEGAAKEEPK 100.35 6.5125e-06 25707000.0 4177.0 4186.1 4971.3 4742.5 6031.2 5705.4 5892.6 5782.3 4957.700000000001 5057.200000000001 6161.5 True False 4601.045965055123 4538.87733811923 5308.6823128554 5035.433454001033 5607.58931851046 5658.937114019344 6116.846117554444 5666.967490373401 4749.345109866161 4737.887528932849 5403.674560966587 0.8514661482930066 0.839961268375743 0.9824208051318702 0.9318535743019127 1.037736313547979 1.0472386984398812 1.1319789984651274 1.0487247939224005 0.8789102778640722 0.876789946448099 1.0 12.399725074903488 -5.761251191023662 24.999790507756973 0.9759629480587277 0.8457136629016799 0.3522780610615669 0.0741112712178136 4.767294708730089 632779.866637433 0.011573853242693319 0.039863828640345954 1.7328014750542676e-06 5.761251191023662 -0.1302492851570478 KVSS(ph)TPPVR ddPTM_A549_MK2206_60min_R1 1 KVSSTPPVR 9 1 Q9H6A9;Q9H6A9-2 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 KVS(0.057)S(0.55)T(0.393)PPVR 48.74100000000001 0.013253999999999998 10596000.0 2898.0 2687.9 1744.9 1688.4 3084.7 2413.3 2261.2 2286.2 3025.3 3244.3 4209.4 True False 3387.111550702522 2824.70262905085 1992.3530578646598 2102.0580757951557 2630.94471627738 2668.67380418111 2672.030770553112 2610.275851193862 2340.0743804113754 2511.4103767357947 3164.0898064701487 1.0704852762953576 0.8927378177682264 0.6296765198606433 0.6643484238332056 0.8315012775229841 0.8434254295576636 0.8444863875510611 0.8249689518471284 0.7395726807836586 0.7937228493326232 1.0 11.627574833117041 -10.903699724030067 1.0999347130317576 1.0024087207645411 0.8048644326680853 0.0 0.1265840762250259 0.5584148166055293 1.1756014832051107 0.08620212370847533 0.019525194732983208 1.248246267115202e-11 10.903699724030067 -0.19754428809645586 KVSS(ph)TPPVR ddPTM_A549_PD325901_60min_R1 1 KVSSTPPVR 9 1 Q9H6A9;Q9H6A9-2 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 KVS(0.113)S(0.443)T(0.443)PPVR 43.544 0.027866000000000002 5296700.0 2303.5 2233.0 1834.3 1501.7 2794.1 2123.4 2473.9 2310.8 2345.6 2174.2 2399.8 True False 2537.3496242529272 2421.1827467141807 1958.786628541962 1594.4565983918512 2597.852055121712 2106.1077344110254 2568.0456182700227 2264.70928121247 2247.022589043722 2036.9206409487074 2104.6398135855916 1.2055980352904876 1.1504024256717387 0.9306992179364196 0.7575911983131397 1.2343452016598766 1.0006974689046355 1.2201829508750692 1.0760555162900651 1.0676518492803566 0.9678238660127246 1.0 11.03935763737578 -10.476721848447145 0.9767747325570565 1.0029376203492393 1.0668535319124801 0.054361512051877 0.13414016364766496 1.7717104534645192 3.209399042368636 0.07056986312073751 0.024342809206407873 3.336400299841492e-11 10.476721848447145 0.06391591156324083 KVSSS(ph)SPQSGCPSPTIPAGK ddPTM_A549_MK2206_60min_R1 1 KVSSSSPQSGCPSPTIPAGK 20 1 E7EWD6;Q76L83;A0A5F9ZHC8 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KVS(0.136)S(0.103)S(0.381)S(0.381)PQSGCPSPTIPAGK 69.071 0.00045921 2540300.0 747.78 589.65 831.74 629.75 894.75 906.43 711.94 639.51 874.85 747.31 983.43 True False 873.9869825342755 619.6606664012179 949.693238780648 784.0387782705521 763.1334602681576 1002.3478209604624 841.2902824993732 730.1625009172363 676.6978718483763 578.4921519706644 739.2171897127711 1.1823142030475107 0.8382660401092569 1.284728293655697 1.060633855897205 1.032353509750875 1.355958485421494 1.138082682880066 0.9877509764091755 0.9154249674731086 0.7825739985773901 1.0 9.529854495263846 -8.32233761192359 4.9634878740114186 0.9600670804928575 1.1249565345706485 0.32529091814595557 0.13903599240577175 0.2155463395138971 11.020744298609149 0.02048612863197723 0.024996709334533344 4.760607627190343e-09 8.32233761192359 0.164889454077791 KVSSS(ph)SPQSGCPSPTIPAGK ddPTM_A549_PD325901_60min_R1 1 KVSSSSPQSGCPSPTIPAGK 20 1 E7EWD6;Q76L83;A0A5F9ZHC8 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KVS(0.089)S(0.138)S(0.441)S(0.327)PQS(0.005)GCPSPTIPAGK 68.309 0.00050935 2865800.0 979.3 1250.4 1121.8 1426.3 1368.7 962.27 847.39 951.25 859.56 870.1 1155.0 True False 1078.7178150774428 1355.7755962791814 1197.932093931403 1514.399311637674 1272.5672337586657 954.4335921596019 879.6378901595999 932.276572508811 823.4356824004186 815.1617375078048 1012.9423221482443 1.0649350821769417 1.338452907569167 1.1826261651214582 1.4950498942782264 1.25630769485454 0.9422388336341231 0.8683987932245413 0.9203649133068528 0.8129146787490124 0.8047464497080276 1.0 9.984336312779694 -7.269309938044107 4.715674037374614 0.9075282196123848 1.2815205596648571 0.7394653851970162 0.11100211524268024 0.0787675373457646 4.951942908452581 0.01672103816384043 0.028077301587839314 5.378857786323806e-08 7.269309938044107 0.3739923400524723 KVSSSSPQSGCPS(ph)PTIPAGK ddPTM_A549_MK2206_60min_R1 1 KVSSSSPQSGCPSPTIPAGK 20 1 E7EWD6;Q76L83;A0A5F9ZHC8 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KVSSSSPQS(0.002)GCPS(0.955)PT(0.042)IPAGK 56.72 0.0026771 1598600.0 281.59 320.15 391.85 479.81 625.12 285.85 398.16 487.98 571.32 510.62 533.72 True False 329.1155077854805 336.44426752878826 447.4202222042912 597.3634715394891 533.1656760914564 316.09845726812665 470.50051813348074 557.1526593760738 441.9169322105666 395.27058735900835 401.18259407736184 0.8203633772855451 0.8386312678957109 1.1152533255667945 1.4890064533166083 1.3289850655600568 0.7879166791747001 1.1727839768710204 1.3887757534880376 1.1015356566674719 0.9852635512965114 1.0 8.648115203543828 -5.756467984699499 7.912322772027205 1.1141567177490423 0.8280446033136933 0.28145424854957335 0.19113908985149408 0.13014779093501722 58.894879060212595 0.027303661275528 0.09683410205373816 1.7519915826825693e-06 5.756467984699499 -0.286112114435349 KVSSSSPQSGCPS(ph)PTIPAGK ddPTM_A549_PD325901_60min_R1 1 KVSSSSPQSGCPSPTIPAGK 20 1 E7EWD6;Q76L83;A0A5F9ZHC8 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KVS(0.001)S(0.001)SS(0.001)PQS(0.009)GCPS(0.98)PT(0.009)IPAGK 64.028 0.00079106 2664500.0 493.16 509.77 741.16 446.05 567.93 512.25 398.04 377.94 523.19 644.8 509.83 True False 543.2252401547963 552.7301069379704 791.4595745571395 473.60149544695 528.0405560521361 508.078405835946 413.1876300158457 370.40169021180554 501.2021437422346 604.0872179577439 447.1241420786487 1.2149315794700335 1.2361893597790694 1.7701114748080915 1.059217006814282 1.1809708006311463 1.1363251455712617 0.9241004703860666 0.8284090599309493 1.1209462799574659 1.351050326089271 1.0 8.804531634820629 -6.465943025625766 24.996159290429215 1.0465826522852175 1.3941016499916112 0.3760364751344103 0.1876983900155861 180.1588979793827 79093.81158383383 0.02247176952804026 0.05221950753045319 3.4202430917365303e-07 6.465943025625766 0.3475189977063937 KVSST(ph)PPVR ddPTM_A549_PD325901_60min_R1 1 KVSSTPPVR 9 1 Q9H6A9;Q9H6A9-2 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 KVS(0.104)S(0.161)T(0.736)PPVR 55.353 0.011022 7316900.0 3908.7 4235.3 3974.7 3750.2 4275.2 4583.5 4275.5 4308.3 4382.9 4763.1 5553.3 True False 4305.5083465671405 4592.22359478664 4244.447043812755 3981.8413366778436 3974.924700639329 4546.173495654579 4438.206492143369 4222.367576704035 4198.701954945314 4462.357053124268 4870.279305269134 0.8840372546825045 0.9429076459369247 0.8714997185522205 0.8175796678375112 0.8161594954808599 0.9334523157093051 0.9112837712082945 0.8669662070788987 0.8621070151772932 0.9162425342416117 1.0 12.249788796347941 -10.763029199997831 0.810718441653936 1.0074605639289866 0.877604401554668 0.2451180486479433 0.045538247860097185 0.44970416404962005 0.47522162441206817 0.03789453430304657 0.00770566031131963 1.7257218583524466e-11 10.763029199997831 -0.12985616237431863 KVST(ph)SGQIR ddPTM_A549_MK2206_60min_R1 2 KVSTSGQIR 9 1 A0A087WZ02;C9JY42;A0A096LNI6;Q86XP1-2;Q16760;Q86XP1 A0A087WZ02 DGKH;DGKD Diacylglycerol kinase eta;Diacylglycerol kinase delta 1 KVS(0.33)T(0.563)S(0.107)GQIR;KVS(0.332)T(0.658)S(0.01)GQIR 103.91 0.00038994 70599000.0 12312.8 12455.5 10325.4 8089.3 12170.1 9515.1 7445.5 8913.5 11961.2 13196.3 12144.7 True False 14390.899620942026 13089.431748258068 11789.69698187619 10071.17886314248 10379.89441163399 10521.981566387803 8798.250973886958 10177.015921448909 9252.007298111446 10215.24666477162 9128.83581333159 1.5764222202272287 1.4338555338176302 1.2914786970600045 1.1032270783569915 1.1370447036056204 1.1526093558415946 0.9637867471598237 1.114820786522042 1.0134925731274493 1.1190086965802861 1.0 13.156215171878713 -3.7330017097422687 0.39632966352418897 1.0032903859881177 3.4762643411294714 0.8856021392598116 0.060919388193109096 2.442503184385462 0.10181637671865175 0.010705134100870867 3.749372354541659 0.00018492613387416666 3.7330017097422687 2.4729739551413537 KVST(ph)SGQIR ddPTM_A549_PD325901_60min_R1 1 KVSTSGQIR 9 1 A0A087WZ02;C9JY42;A0A096LNI6;Q86XP1-2;Q16760;Q86XP1 A0A087WZ02 DGKH;DGKD Diacylglycerol kinase eta;Diacylglycerol kinase delta 1 KVS(0.322)T(0.639)S(0.039)GQIR 81.525 0.00097943 40722000.0 5046.9 5121.0 5428.4 5210.1 5281.9 5488.4 6450.5 5899.6 5361.9 5117.1 5648.1 True False 5559.257572668591 5552.564642151061 5796.803867620996 5531.916044004385 4910.91756556579 5443.70429007322 6695.977307349041 5781.92784985333 5136.557989509521 4794.0054327102525 4953.4195062558465 1.1223070377236595 1.1209558639518686 1.1702630597509478 1.1167873096591021 0.9914196767230437 1.0989790554178132 1.3517888599769226 1.167259878262104 1.0369721326898282 0.9678173687198783 1.0 12.274209092988768 -8.850231000113432 5.033296467480057 1.0161597646865335 1.1421654598267807 0.366609591448947 0.08212535503358905 0.1879678109144021 7.97871691541711 0.015055610769557656 0.015974871663462373 1.411786419328921e-09 8.850231000113432 0.1260056951402473 KVSVSES(ph)NVLLDEEVLTDPK ddPTM_A549_MK2206_60min_R1 1 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.297)VS(0.079)ES(0.624)NVLLDEEVLTDPK 130.6 3.7731999999999996e-17 31236000.0 1226.8 1237.9 1182.0 1060.7 1270.6 1295.1 1300.2 1073.1 1573.8 1301.9 1683.7 True False 1433.8538476196875 1300.9038225015988 1349.625373600795 1320.5715476166317 1083.6964231536417 1432.1466223821974 1536.4295099385974 1225.2152112309213 1217.3368128421716 1007.7998857911809 1265.5908222439746 1.132952153585763 1.0279023833271894 1.066399463301908 1.0434427339439558 0.8562770874335022 1.1316031984515411 1.214001779196224 0.9680974211384809 0.9618723456636281 0.7963078335257571 1.0 10.305595327550732 KVSVSES(ph)NVLLDEEVLTDPK ddPTM_A549_PD325901_60min_R1 3 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.203)VS(0.345)ES(0.452)NVLLDEEVLTDPK;KVS(0.072)VS(0.122)ES(0.806)NVLLDEEVLTDPK;KVS(0.116)VS(0.116)ES(0.768)NVLLDEEVLTDPK 109.68 2.4388999999999997e-10 79414800.0 3505.67 3879.51 3457.95 4013.8100000000004 3820.48 4154.650000000001 3992.1600000000003 4548.5 4431.5 4897.299999999999 4480.7 True False 3861.5630376621466 4206.44992284153 3692.6272813425726 4261.733927676096 3552.14266474049 4120.815907869815 4144.0838333937745 4457.776599270778 4245.259465956367 4588.083642221551 3929.6023054975244 0.9826854570651613 1.0704518156854435 0.939694909120085 1.0845204161535427 0.9039445695995834 1.0486597847585704 1.054580975687079 1.1344090960640818 1.080328016913375 1.1675694600959514 1.0 11.940167596912191 -7.439137120392475 24.99973201285085 1.0489297378215587 0.9995581548825344 0.21061208468959236 0.06745286465754542 139.01392410009313 41498.7177133891 0.00881064176627261 0.01408478228258385 3.6380015487044613e-08 7.439137120392475 -0.04937158293902433 KVT(ph)AEADSSSPTGILATSESK ddPTM_A549_MK2206_60min_R1 1 KVTAEADSSSPTGILATSESK 21 1 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 KVT(0.999)AEADS(0.001)SSPTGILATSESK 149.99 3.3541000000000004e-22 4650400.0 1110.5 1468.1 1468.0 1412.5 1612.4 1420.2 1471.1 1598.3 2223.5 2170.0 2315.6 True False 1297.9252508816944 1542.8200192379013 1676.1844741505658 1758.5625634095354 1375.2180959333648 1570.4846213475375 1738.3798277731662 1824.8639195884648 1719.88080019988 1679.7954928695476 1740.5726126911843 0.7456886552264596 0.886386473042611 0.9630074964576946 1.0103356508008798 0.7900952168878912 0.9022804391477438 0.9987401933696821 1.0484273429805113 0.9881120659141525 0.9650821118415357 1.0 10.765346285902261 -7.735767247083111 5.419108443978449 0.9996007600480769 0.887536561803864 0.4086102481491568 0.0701734861289837 0.14851459851319684 11.90072183520928 0.010636398522691921 0.015576261044763293 1.837522869377636e-08 7.735767247083111 -0.11206419824421288 KVT(ph)FQGVGDEEDEDEIIVPK ddPTM_A549_PD325901_60min_R1 1 KVTFQGVGDEEDEDEIIVPK 20 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KVT(1)FQGVGDEEDEDEIIVPK 40.141999999999996 0.026579000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVT(ph)SPLQS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 2 KVT(0.533)S(0.469)PLQS(0.998)PT(0.001)K 74.816 0.00057596 10410000.0 1407.4 1635.6 1460.3 1150.7 1747.0 1450.1 1119.3 1206.7 2190.9 2086.7 1886.8 True False 1644.9347123736115 1718.845053787555 1667.3924983665327 1432.6215516568866 1490.0186142369066 1603.5486195015228 1322.6623215461252 1377.753420363762 1694.6646481483776 1615.31302072391 1418.255486969134 1.159829612849868 1.2119431721436822 1.1756644086248622 1.0101293912272842 1.0505995766821485 1.1306486272994207 0.9325980640996532 0.971442333925373 1.1948937717631825 1.1389436075272275 1.0 10.469901730202979 -6.1646791872896305 6.927013288015359 1.0693466125692983 1.187157898920238 0.35311478587261735 0.07552018479215802 0.285523642486029 17.6621295630441 0.012624801475500064 0.03374398416263302 6.844170384764417e-07 6.1646791872896305 0.11781128635093974 KVT(ph)SPLQSPTK ddPTM_A549_PD325901_60min_R1 1 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 KVT(0.673)S(0.327)PLQSPTK 82.90799999999999 0.00040427 17774000.0 2948.5 3288.8 3625.7 3482.3 4044.1 3809.0 3896.7 4522.1 4213.4 3870.4 3751.8 True False 3247.8295494290214 3565.958718044603 3871.7618051052664 3697.3937621228874 3760.0563673876068 3777.980766869923 4044.9910508560592 4431.90316798118 4036.325450493185 3626.022283473404 3290.352384619728 0.9870765102882374 1.0837619504564788 1.176701262516213 1.1237075333954547 1.1427518781767696 1.1481994404397362 1.2293488897310147 1.3469387621512712 1.2267152507313197 1.10201639812888 1.0 11.684026384221204 -5.395278512384596 2.8873076966864724 1.1428561848298517 0.9797704382179657 0.2551740172724778 0.08533176961642225 0.482771138640606 6.351939956690893 0.01548310031715792 0.15437197834709693 4.024588553032762e-06 5.395278512384596 -0.16308574661188602 KVTAAMGK ddPTM_A549_PD325901_60min_R1 1 KVTAAMGK 8 1 P61353;K7ELC7 P61353 RPL27 60S ribosomal protein L27 0 85.73100000000001 0.0029533000000000003 2798700.0 3048.4 3473.9 2783.2 2956.3 3815.5 3678.8 3727.6 3417.5 3994.4 3771.7 3537.3 False True 3357.871323886528 3766.65774465311 2972.084688741202 3138.903936755562 3547.512442760423 3648.8410725022545 3869.455857820986 3349.335281523115 3826.52925890017 3533.554218317652 3102.2345247921935 1.082404085523308 1.214175689990886 0.9580464226637703 1.0118203223097146 1.1435345762577562 1.1761976869710313 1.2473124861764555 1.079652506848261 1.233475170339191 1.139035166451302 1.0 11.599092040979682 KVTAEADSSS(ph)PTGILATSESK ddPTM_A549_MK2206_60min_R1 2 KVTAEADSSSPTGILATSESK 21 1 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 KVTAEADS(0.006)S(0.296)S(0.682)PT(0.015)GILATSESK;KVTAEADS(0.004)S(0.026)S(0.961)PT(0.009)GILATSESK 172.32 1.6839000000000003e-35 62949000.0 6652.1 6636.9 6030.8 5582.4 7703.0 5957.3 5919.9 6072.5 9181.900000000001 7849.799999999999 7686.1 True False 7774.811851769581 6974.689861508083 6886.058124459962 6950.08825060346 6569.898904102395 6587.697531864301 6995.469201573216 6933.295471251302 7102.214310481344 6076.524728077131 5777.429244431559 1.345721690882351 1.207230684517768 1.191889650764123 1.2029724565302364 1.1371664846323544 1.1402472021987462 1.2108273257202824 1.2000658386139125 1.2293035552666696 1.0517696489202093 1.0 12.496211970928723 -10.77329464986366 0.7838673433751764 0.9848542093676822 1.2047304585108976 0.6225802177015718 0.053863192298289245 0.36478772946409765 0.35261967042782516 0.05135426071556608 0.00995661740549212 1.6854091607971855e-11 10.77329464986366 0.21987624914321535 KVTAEADSSS(ph)PTGILATSESK ddPTM_A549_PD325901_60min_R1 2 KVTAEADSSSPTGILATSESK 21 1 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 KVTAEADS(0.033)S(0.191)S(0.73)PT(0.046)GILATSESK;KVTAEADS(0.033)S(0.195)S(0.763)PT(0.009)GILATSESK 139.22 1.0119e-18 107667000.0 4547.9 4714.5 4573.3 5149.9 6183.6 5342.9 5323.4 5388.0 5978.1 5517.4 6435.6 True False 5009.599460012972 5111.807460539191 4883.6716394869745 5467.997626728497 5749.285268261915 5299.389193832849 5525.984900076253 5280.532113195766 5726.861246402743 5169.030422394625 5644.061998629644 0.887587602905369 0.9056965465262993 0.8652760442165076 0.9688053795397898 1.018643181038376 0.9389317826628267 0.9790794114979496 0.9355907349135886 1.014670152063036 0.9158351597926537 1.0 12.462518120333668 -5.681876101681699 0.37662382376533127 1.006303054464077 0.8058676677907979 0.25507634223656084 0.04283240250391217 2.141546611607712 0.2530093483576911 0.009510018066904262 0.18301981417965674 2.0802900809674194e-06 5.681876101681699 -0.2004353866732791 KVTELLR ddPTM_A549_MK2206_60min_R1 1 KVTELLR 7 1 M0R0M7;Q15833-2;Q15833;Q15833-3 M0R0M7 STXBP2 Syntaxin-binding protein 2 0 54.408 0.042972 1476900.0 883.99 795.84 699.63 783.48 1062.4 905.03 696.34 1007.6 891.32 1058.4 1256.5 False True 1033.1859005195038 836.344856692521 798.8480542574661 975.4326351717536 906.1223673527696 1000.7996738897066 822.8559644290436 1150.4303856455836 689.4374431455618 819.3067049092756 944.4763723641706 1.093924560477124 0.8855116773318747 0.8458105227744614 1.0327761114130305 0.9593912498674848 1.0596344209062107 0.8712298036310931 1.2180615834421333 0.7299679095410223 0.8674718911796852 1.0 9.8833708954414 -8.799865423414595 24.999972146420337 0.8724849498979182 0.9851132950782964 0.1891974432219904 0.11812297405512007 245.01984931527883 159408.79636767987 0.0230664153867801 0.02455628468766104 1.5853843858168158e-09 8.799865423414595 0.11262834518037812 KVTFFEPGS(ph)GDENGTSNKEDEFR ddPTM_A549_MK2206_60min_R1 1 KVTFFEPGSGDENGTSNKEDEFR 23 2 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 KVTFFEPGS(0.733)GDENGT(0.133)S(0.133)NKEDEFR 52.32899999999999 0.0016248 8680700.0 1787.8 1977.1 2694.5 2256.0 3284.6 2436.4 2202.9 2280.1 2858.9 3140.0 3106.2 True False 2089.536932486531 2077.7259451231207 3076.620616892846 2808.7201012756886 2801.4396910833093 2694.2182308485694 2603.1384152005353 2603.3111575133944 2211.363714725178 2430.67181917529 2334.844813241216 0.8949361090880597 0.8898775341898786 1.317698118283888 1.202957937652671 1.199839781725951 1.1539174747586216 1.114908537148932 1.1149825216432674 0.9471137876848345 1.0410421306763629 1.0 11.189110948255466 -8.753483734951699 24.133701017695653 0.9750259541909032 1.1182184766097478 0.14311479753764678 0.12161276935622718 132.81328839652116 402892.3697326413 0.02135183806797411 0.02398773755663122 1.7640718306537198e-09 8.753483734951699 0.14319252241884461 KVTFFEPGS(ph)GDENGTSNKEDEFR ddPTM_A549_PD325901_60min_R1 1 KVTFFEPGSGDENGTSNKEDEFR 23 2 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 KVTFFEPGS(1)GDENGTSNKEDEFR 124.08 1.9895e-16 15067000.0 4410.5 5009.9 4665.3 4594.5 6103.5 6205.6 5027.1 5678.7 5592.2 5156.1 5469.6 True False 4858.2507131615075 5432.101855245575 4981.915312727919 4878.29183013342 5674.81121593192 6155.0636510601225 5218.409041434672 5565.433873646031 5357.179281399343 4830.5429660544705 4796.873874651115 1.0127951745478938 1.1324254081290934 1.0385754228508377 1.0169731282518297 1.183022811152119 1.28314060613232 1.0878770586425344 1.1602210145770853 1.1168063662689025 1.0070189653268304 1.0 12.227878791575366 -4.166277700406572 16.111048578547543 1.0845564987531322 1.097855782041643 0.0 0.08696510450952902 0.0 0.0 0.012120357800504607 0.0 6.819025265819433e-05 4.166277700406572 0.013299283288510821 KVTGT(ph)LDANR ddPTM_A549_MK2206_60min_R1 1 KVTGTLDANR 10 1 Q16658;C9JFC0;A0A0A0MSB2 Q16658 FSCN1 Fascin 1 KVT(0.216)GT(0.784)LDANR 43.593999999999994 0.040563 2950200.0 1717.9 1901.0 1589.5 1360.5 2184.8 1675.2 1903.9 1661.5 2622.1 2028.4 2198.6 True False 2007.839521377455 1997.7527801725012 1814.9150011323734 1693.8225610751658 1863.4188141870595 1852.4685520922362 2249.813985519222 1897.022713130348 2028.1985366332829 1570.1830312150184 1652.6269417269134 1.2149381513043482 1.208834692047891 1.0982000567144796 1.0249273555380896 1.1275495800884614 1.1209236067254829 1.3613562315329786 1.1478832065681157 1.227257335230125 0.9501134173537403 1.0 10.690545377070459 -10.88344748703429 1.122494089735869 0.9996324042679468 1.1716020488589711 0.43420812301124145 0.08421591111191501 0.45491321248749167 1.0141096412194623 0.06099440399141846 0.014534598585028131 1.3078336668159099e-11 10.88344748703429 0.17196964459102437 KVTGTEGSSSTLVDYTST(ph)SSTGGSPVRK ddPTM_A549_MK2206_60min_R1 1 KVTGTEGSSSTLVDYTSTSSTGGSPVRK 28 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDYT(0.014)S(0.076)T(0.428)S(0.288)S(0.024)T(0.09)GGS(0.081)PVRK 216.71 1.9210999999999998e-90 47106000.0 3319.0 4252.5 3484.8 2807.0 5348.1 3932.8 4203.8 4040.1 5958.2 5084.4 5606.2 True False 3879.1660582407426 4468.934086103925 3978.9970405448857 3494.7151260110204 4561.401574585229 4348.966285618644 4967.576045131419 4612.796547287339 4608.677213290272 3935.8305087308418 4214.025816751303 0.9205368516776881 1.0604904384636964 0.9442270203300257 0.8293055804544602 1.0824332296335402 1.0320217470740058 1.178819556677763 1.0946293990299896 1.0936518696611157 0.933983482750723 1.0 12.040983437351949 -6.805846185646893 24.999984329770385 1.0606715009549328 0.9477421102225764 0.3622116118317442 0.0767031011440923 109.20970446342842 61482.16283050934 0.010473173924278855 0.019792511960077707 1.5637013616862984e-07 6.805846185646893 -0.11292939073235642 KVTGTEGSSSTLVDYTST(ph)SSTGGSPVRK ddPTM_A549_PD325901_60min_R1 2 KVTGTEGSSSTLVDYTSTSSTGGSPVRK 28 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDY(0.012)T(0.126)S(0.126)T(0.147)S(0.147)S(0.147)T(0.147)GGS(0.147)PVRK;KVTGTEGSSSTLVDYT(0.005)S(0.025)T(0.194)S(0.194)S(0.194)T(0.194)GGS(0.194)PVRK 176.98 4.5741e-57 67596600.0 1918.64 1726.1 2232.3 2334.9 2296.87 1898.06 1675.75 2424.2 3171.7 2441.2 2494.8 True False 2113.418920371885 1871.5645047484766 2383.797301910389 2479.1214700573573 2135.5457749713355 1882.6028286597882 1739.5215832555862 2375.8474292518886 3038.404478883858 2287.062215382202 2187.9554158402093 0.9659332658569275 0.8553942604126448 1.0895090844412718 1.1330767766606138 0.9760462939557899 0.8604393010160306 0.7950443462704575 1.0858756133929384 1.3886957919190792 1.0452965352147883 1.0 11.09536762516844 -8.518677081018883 24.961926718294706 1.1863789465152945 0.9579184090975947 0.2862160924003122 0.1316000207369736 171.16083831122123 1016862.8349039856 0.02802562791442032 0.03215641136554981 3.029164921778638e-09 8.518677081018883 -0.22846053741769978 KVTGTEGSSSTLVDYTSTS(ph)STGGSPVRK ddPTM_A549_MK2206_60min_R1 2 KVTGTEGSSSTLVDYTSTSSTGGSPVRK 28 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDYT(0.048)S(0.048)T(0.062)S(0.267)S(0.207)T(0.207)GGS(0.161)PVRK;KVTGTEGSSSTLVDYT(0.001)S(0.005)T(0.007)S(0.247)S(0.247)T(0.247)GGS(0.247)PVRK 117.82 7.3284e-21 51379700.0 1946.0500000000002 2627.02 2061.66 1865.91 2978.08 2501.11 2161.0699999999997 1874.31 3011.0299999999997 3395.33 3182.2 True False 2274.495663645494 2760.724097090353 2354.0343889490823 2323.058033763884 2540.0083770387196 2765.775800097549 2553.7084456568227 2139.9991823336395 2329.0365126268684 2628.3225948409017 2391.9719157479212 0.9508872778442741 1.1541624209359207 0.9841396437186108 0.9711895104075713 1.0618888793451868 1.1562743617049311 1.0676164000271424 0.8946589917066418 0.9736889038258737 1.0988099724486433 1.0 11.223984735548834 -8.185607024286137 24.99985705552626 0.9802580801038137 1.0525435469120248 0.10815923535078231 0.07678025103847094 151.518443714615 49950.97605206657 0.010694096111341077 0.013806018138298754 6.522182933908594e-09 8.185607024286137 0.07228546680821113 KVTGTEGSSSTLVDYTSTS(ph)STGGSPVRK ddPTM_A549_PD325901_60min_R1 1 KVTGTEGSSSTLVDYTSTSSTGGSPVRK 28 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSS(0.001)S(0.001)T(0.001)LVDYT(0.051)S(0.051)T(0.051)S(0.223)S(0.223)T(0.2)GGS(0.2)PVRK 106.78 1.8261e-15 10342000.0 1269.5 1436.1 1520.5 1738.3 1902.9 1656.9 1613.3 1966.0 1731.4 1988.8 2082.6 True False 1398.3787054434947 1557.1251869933874 1623.6902735092706 1845.6708430342642 1769.2468686486193 1643.406755743444 1674.6950143316333 1926.7865877028362 1658.6352791056877 1863.2268285892685 1826.4534026891201 0.765625174660704 0.8525403301835153 0.88898532594299 1.0105217249544116 0.9686788976076397 0.8997802809115342 0.9169108896323058 1.0549333395891698 0.9081180372100647 1.0201337881634462 1.0 10.834829232138715 -5.649568591807991 1.6501266746052674 0.9594018852167409 0.7618806939289249 0.6263068464365809 0.04965901598167075 0.26835867972534094 1.1392839174530884 0.007131296447395084 0.06651719772545059 2.2409460862246684e-06 5.649568591807991 -0.19752119128781598 KVTGTEGSSSTLVDYTSTSSTGGS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 KVTGTEGSSSTLVDYTSTSSTGGSPVR 27 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDYTSTSST(0.005)GGS(0.995)PVR;KVTGTEGSSSTLVDYTSTSS(0.002)T(0.003)GGS(0.995)PVR 186.9 5.332399999999999e-58 54360000.0 2159.58 2208.35 2223.1 1778.56 3049.5 1793.5300000000002 2378.1 2024.0500000000002 3184.3 2974.5 2622.8 True False 2524.0643073382153 2320.745582374509 2538.3690085041703 2214.307279842593 2600.922589648221 1983.3201541511405 2810.1699873750013 2310.965285893158 2463.0611342822035 2302.5583841200323 1971.4863744025058 1.2802849363354987 1.1771552735574207 1.287540731430857 1.1231664132163623 1.3192698785130976 1.0060024659070854 1.425406750897111 1.1721943990576844 1.2493422050805085 1.1679301536222202 1.0 10.945068024197411 -10.721548180083243 0.804283643770141 0.9881570407794376 1.2262087324590198 0.12837213318823293 0.11518332823321355 0.5373864877044682 0.567929746205507 0.0816175904078452 0.017425171345167433 1.898680193225958e-11 10.721548180083243 0.2380516916795823 KVTGTEGSSSTLVDYTSTSSTGGS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 KVTGTEGSSSTLVDYTSTSSTGGSPVR 27 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDYTS(0.001)TS(0.001)S(0.002)T(0.008)GGS(0.988)PVR;KVTGTEGSSSTLVDYTST(0.001)S(0.004)S(0.018)T(0.013)GGS(0.963)PVR 166.07 4.2148e-42 68273000.0 1586.25 1710.3600000000001 1881.0 2000.1 2226.91 2415.6000000000004 2003.8200000000002 1681.81 2487.3 2875.1000000000004 2916.5 True False 1747.2849322644681 1854.4980397089416 2008.6559713718764 2123.6416344433246 2070.499524022438 2395.9281544896276 2080.0764666323776 1648.2649801955781 2382.7674308187457 2693.5656953323655 2557.7889892167586 0.6831231738156471 0.7250394960363101 0.7853094918463009 0.8302645931295616 0.809488012010116 0.9367184566789867 0.8132322390164541 0.6444100694562404 0.9315731050779104 1.0530836228821143 1.0 11.32068153529004 -5.726972060565234 0.0499919478200149 1.5016969971507612 1.1292680217130688e-14 0.5754654324740822 0.08087826321591725 90.83824471597971 0.7788385374963428 8.302924119235703 15.988178614190488 1.8751151358304828e-06 5.726972060565234 -1.50169699715075 KVTGTEGSSSTLVDYTSTSSTGGS(ph)PVRK ddPTM_A549_PD325901_60min_R1 1 KVTGTEGSSSTLVDYTSTSSTGGSPVRK 28 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDYTST(0.001)S(0.008)S(0.032)T(0.134)GGS(0.825)PVRK 170.75 1.3025999999999998e-57 9485000.0 1996.5 2103.7 1839.1 2050.6 1905.2 2062.7 1615.7 2055.8 2274.4 2595.2 2094.5 True False 2199.18321025438 2280.986181935793 1963.9123854067072 2177.260904749503 1771.3853245831879 2045.902055086004 1677.1863476449641 2014.7954562561004 2178.814877439053 2431.3386291003985 1836.889778129436 1.197231993143257 1.241765406446213 1.0691509141101663 1.185297523385795 0.9643394751682088 1.1137859655190698 0.9130576954665712 1.0968515804512948 1.1861435037532901 1.323617049889792 1.0 10.843049345342799 -5.847777191302068 1.753860091568516 1.0749999873516165 1.2274920935569302 0.11800319149132288 0.11163624353462746 0.45130036820999236 2.502266127701022 0.01330375610489383 0.07844008900161713 1.4197857360486708e-06 5.847777191302068 0.15249210620531373 KVTKNEEPS(ph)EEEIDAPKPK ddPTM_A549_MK2206_60min_R1 2 KVTKNEEPSEEEIDAPKPK 19 3 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KVT(0.001)KNEEPS(0.999)EEEIDAPKPK;KVT(0.02)KNEEPS(0.98)EEEIDAPKPK 92.336 7.2657e-07 8592900.0 1166.89 1990.1 2048.34 1902.6100000000001 2124.45 1536.42 1787.0500000000002 1162.68 2544.5 3015.1 2901.0 True False 1363.8325042785586 2091.3875895956307 2338.8254126577435 2368.749535411409 1811.9462192418982 1699.0029446069445 2111.733853050123 1327.493450558166 1968.1748127315457 2333.986815922105 2180.601636473108 0.6254386319201397 0.9590874163417709 1.0725596888208089 1.0862825633950317 0.8309386679964751 0.7791441206817131 0.9684179896634529 0.6087739403448517 0.9025833879107142 1.070340761413479 1.0 11.090510519758743 -10.048131009670549 1.2372782684655994 0.9853220076766818 0.8799739827717731 0.1307312469524936 0.1517082582497843 0.8291647284482829 2.5448100995432794 0.048126552660535456 0.027488561756574735 8.950947097303486e-11 10.048131009670549 -0.10534802490490869 KVTKNEEPS(ph)EEEIDAPKPK ddPTM_A549_PD325901_60min_R1 3 KVTKNEEPSEEEIDAPKPK 19 3 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KVT(0.034)KNEEPS(0.966)EEEIDAPKPK;KVT(0.004)KNEEPS(0.996)EEEIDAPKPK;KVTKNEEPS(1)EEEIDAPKPK 94.837 8.371899999999999e-07 23886400.0 2997.7799999999997 3607.7799999999997 4497.63 5874.14 4200.08 11908.599999999999 7499.1 6878.9 6253.299999999999 4112.49 5470.87 True False 3302.112418751005 3911.820282105012 4802.866218246299 6236.972286660125 3905.0808702893946 11811.620309883743 7784.482354164982 6741.694943107346 5990.495547436523 3852.8266795580666 4797.987672702307 0.6882286166632021 0.815304362777116 1.0010167899287754 1.2999141957251754 0.8138997297777525 2.461786297844163 1.622447343592409 1.4051088504173483 1.248543338599821 0.8030088742158211 1.0 12.228213735633556 -5.908668883372405 1.5867922397550056 1.2639496445216927 0.6890825431947875 0.2093513582302745 0.4340387506635606 0.6212364051843338 2.7635350377949437 0.06406206598995474 0.3764878398159993 1.234045340695419e-06 5.908668883372405 -0.5748671013269052 KVTLS(ph)SSK ddPTM_A549_MK2206_60min_R1 1 KVTLSSSK 8 1 F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 KVT(0.031)LS(0.95)S(0.018)S(0.001)K 90.61399999999999 0.0011004 8950300.0 4619.7 4862.1 5065.9 4145.9 5289.5 4889.4 4341.2 4246.8 6947.2 5990.8 5963.5 True False 5399.392419178896 5109.560122291806 5784.320795367407 5161.645686116522 4511.421556958279 5406.793062678953 5129.9398465970135 4848.796905279541 5373.670292398745 4637.474119208699 4482.5983657729685 1.2045229080539848 1.1398656996143186 1.2903946156617074 1.1514852023166835 1.0064300186707316 1.2061738798556445 1.1444121083358354 1.0816933638986472 1.198784690020321 1.034550441685405 1.0 12.130119526485418 -10.892420308256922 0.8958261298926677 0.9894337962071563 1.1591584692343904 0.37299173527338214 0.07006412926498591 0.5488143976763472 0.6973463781134515 0.06628365784092063 0.012348689589632608 1.2810901491939803e-11 10.892420308256922 0.16972467302723404 KVTLSS(ph)SK ddPTM_A549_MK2206_60min_R1 1 KVTLSSSK 8 1 F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 KVT(0.007)LS(0.328)S(0.582)S(0.082)K 84.65799999999999 0.0013062000000000002 13066000.0 3857.0 4859.7 4409.3 4941.2 5409.8 3863.0 3619.4 4409.3 6054.0 5638.9 5927.9 True False 4507.967305403597 5107.03797254303 5034.605042147201 6151.794221818897 4614.025586318729 4271.780095948132 4276.998129727548 5034.331777914922 4682.778666251439 4365.068573613864 4455.838828282983 1.0116989144198245 1.1461451298746774 1.1298893959517922 1.380614169159578 1.0355010053397067 0.9586926862869104 0.9598637416101629 1.1298280687263673 1.0509308901677454 0.9796289187811363 1.0 12.121481334700427 -6.959039196207471 24.999762706420917 1.0229157075883617 1.168574622655854 0.3795829770507999 0.09258141974359083 122.46114245682291 74741.64570190466 0.01284069314557843 0.024266610567117767 1.0989066557706313e-07 6.959039196207471 0.1456589150674923 KVTLSS(ph)SK ddPTM_A549_PD325901_60min_R1 2 KVTLSSSK 8 1 F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 F8W7U3 FAM21A WASH complex subunit FAM21A 1 KVT(0.023)LS(0.204)S(0.387)S(0.387)K;KVT(0.03)LS(0.326)S(0.633)S(0.01)K 96.229 0.0010414999999999999 29137000.0 11441.0 12689.3 12937.400000000001 13078.3 15122.6 14359.2 14059.3 14892.7 13773.400000000001 14265.8 14389.7 True False 12602.481897580948 13758.671844102224 13815.409762906178 13886.116888025657 14060.440746137796 14242.263435977582 14594.334355044168 14595.653415402867 13194.551896288707 13365.054953383345 12619.858123823893 0.9986231044697609 1.0902398195846963 1.094735743250973 1.1003385895290938 1.1141520457820644 1.1285597109123513 1.1564578786739954 1.156562401272091 1.0455388457481865 1.059049540989107 1.0 13.623408070756897 -8.974879058473423 4.1781481088822146 1.0189212388244884 1.1068480428445084 0.3432018648584443 0.0424930247608858 0.1359485904695344 4.9425178427961125 0.007848990597633953 0.008064925556748731 1.0595487452780657e-09 8.974879058473423 0.08792680402002007 KVTLTGDT(ph)EDEDSASTSSSLKR ddPTM_A549_PD325901_60min_R1 1 KVTLTGDTEDEDSASTSSSLKR 22 2 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 KVTLT(0.001)GDT(0.999)EDEDSASTSSSLKR 79.365 4.2706e-05 9026200.0 2574.6 2866.7 2983.0 3367.3 3742.8 3957.1 2811.5 3854.5 3822.7 3685.3 3407.9 True False 2835.9714966796546 3108.286869684523 3185.4443182362083 3575.2904733068385 3479.9186399590376 3924.874689572324 2918.4931710118326 3777.618973703248 3662.0452127973376 3452.609529062768 2988.749904458011 0.9488821705856109 1.0399956399992556 1.0658116001893663 1.1962494646922264 1.1643391890262884 1.3132161656343315 0.9764929366149427 1.2639461629320548 1.2252765637349052 1.1552018868868437 1.0 11.545326463480059 -5.629303939458557 1.7871060881291934 1.1336888512176764 0.9495950999520456 0.288827151490323 0.09903043638231421 0.597254428886661 3.0549713955186504 0.016243877779272765 0.14531041483632012 2.3479890138945257e-06 5.629303939458557 -0.18409375126563077 KVTS(ph)PLQS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 2 KVT(0.481)S(0.56)PLQS(0.947)PT(0.012)K;KVT(0.469)S(0.531)PLQS(0.62)PT(0.379)K 47.915 0.0082016 12332900.0 1998.83 2497.6000000000004 1897.5 2054.1 2774.3 2271.9 2238.46 2239.9 3105.3 3009.0 3589.3 True False 2336.1836372983853 2624.7171718878694 2166.594032493663 2557.3545922120534 2366.2041450929887 2512.3109500348337 2645.1592069044377 2557.4126844060593 2401.954508145127 2329.264810158742 2697.977750359506 0.865901743254587 0.9728461146642612 0.803043699009365 0.9478783106611185 0.8770287837910048 0.9311829757306441 0.9804229136255738 0.9478998424154105 0.8902795835974059 0.8633372939596581 1.0 11.397662735402545 -7.459649560815006 5.635113047365645 0.9493305912646481 0.8961468047617562 0.107959997832895 0.05472009621801633 0.29757515444797056 18.926798343846638 0.008048287599000661 0.012847085969872066 3.470167508928796e-08 7.459649560815006 -0.053183786502891905 KVTS(ph)PLQS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 2 KVT(0.132)S(0.868)PLQS(0.932)PT(0.068)K;KVT(0.13)S(0.87)PLQS(0.932)PT(0.068)K 103.79 5.1013e-05 23095100.0 3506.3 3605.2 3559.2 4143.0 3605.1000000000004 3954.6 3973.2000000000003 4189.9 3817.8 3952.1 4540.2 True False 3862.2569947983643 3909.022856450498 3800.7487152082845 4398.90370056432 3351.890212919827 3922.3950487434513 4124.402300218462 4106.3291575870335 3657.351142757131 3702.563731530396 3981.7841826990984 0.9699815001475768 0.9817264515327703 0.9545340834198359 1.1047569377761888 0.8418060997589552 0.9850847933412128 1.0358176412822777 1.0312786854267704 0.9185206869444023 0.9298755436364636 1.0 11.959199312102323 -8.762769832388601 24.999785226860464 0.9615236620201112 0.9872894823779452 0.05895546806300789 0.06395568991028623 114.7367397712308 2155933.865784776 0.011022680885443533 0.012047060139476878 1.7267527948568554e-09 8.762769832388601 0.025765820357834035 KVTS(ph)PLQSPT(ph)K ddPTM_A549_PD325901_60min_R1 2 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 2 KVT(0.123)S(0.877)PLQS(0.406)PT(0.594)K;KVT(0.099)S(0.901)PLQS(0.284)PT(0.716)K 89.64200000000001 0.00012622 27158800.0 3118.7 3438.0 3735.8 4080.1000000000004 3820.5 3774.5 4045.3999999999996 3560.2000000000003 3655.3 3832.9 4049.2 True False 3435.3081281344034 3727.732325662051 3989.3338531903514 4332.118510420582 3552.161260009485 3743.7617234314857 4199.349910727822 3489.1890180771325 3501.680452648158 3590.890039873194 3551.174069993653 0.9673724972148559 1.0497182768820774 1.1233844848381316 1.2199116193784116 1.0002779897567324 1.0542321073656007 1.1825243786867725 0.982545194717354 0.9860627453428146 1.0111838983662131 1.0 11.79408036418786 -8.317322591047011 24.997055864268592 0.9924190984696517 1.0861458522164251 0.28177987452385034 0.06937524464283021 272.4775607368433 121880.95295632131 0.011187766149074959 0.013525351370048457 4.8158994293525356e-09 8.317322591047011 0.09372675374677342 KVTS(ph)PLQSPTK ddPTM_A549_MK2206_60min_R1 2 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 KVT(0.284)S(0.715)PLQSPT(0.001)K;KVT(0.182)S(0.818)PLQSPTK 107.74 5.5713999999999995e-05 25246000.0 4705.1 5401.9 5606.0 5034.6 6830.6 4954.4 4794.0 4605.1 6951.6 7427.1 7367.8 True False 5499.205851349356 5676.833636619583 6401.015096790241 6268.077226011785 5825.827788441104 5478.671319535445 5665.007745458876 5257.887027527269 5377.0736994241015 5749.31295165503 5538.171919064656 0.9929640920713994 1.025037452715687 1.1557992764282605 1.1317953500927798 1.0519405814012777 0.9892562743810126 1.0229021107050864 0.9493903591955078 0.9709113003361292 1.0381246800706094 1.0 12.435194124017396 -7.180072051882009 3.4995814685843647 0.9858643266718451 1.0795691513492862 0.38592464127466897 0.047684439603988577 0.16969484309828542 4.009929692014217 0.007000713954819613 0.01245652666912195 6.605838443638478e-08 7.180072051882009 0.09370482467744112 KVTS(ph)PLQSPTK ddPTM_A549_PD325901_60min_R1 1 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 KVT(0.156)S(0.844)PLQSPTK 115.91 8.429199999999999e-06 22010000.0 3534.2 3486.5 3870.6 3814.1 5193.8 4542.7 4578.4 4045.3 4682.8 3842.5 4139.9 True False 3892.9893822594704 3780.319590872815 4133.2821918086 4049.688294550415 4829.005405637287 4505.705757327382 4752.633517396609 3964.6133180235397 4485.998200875657 3599.8838942348466 3630.718544988326 1.0722366203883171 1.041204253106039 1.1384198859242312 1.115395821617849 1.330041242746018 1.2409956050013426 1.309006318861296 1.0919638272418848 1.2355676005423002 0.9915072869539717 1.0 11.826039380735788 -4.154931551472332 14.214327082687406 1.1400733738502449 1.1542719267481854 0.0 0.11398810929644206 0.0 0.0 0.016229656439893454 0.0 6.999523057837573e-05 4.154931551472332 0.014198552897940475 KVTSPSSSSSSSSSDSES(ph)DDEADVSEVTPR ddPTM_A549_MK2206_60min_R1 3 KVTSPSSSSSSSSSDSESDDEADVSEVTPR 30 1 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 KVTSPSSSSSSSSSDS(0.029)ES(0.971)DDEADVSEVTPR;KVTSPSSSSSSSSSDS(0.009)ES(0.991)DDEADVSEVTPR;KVTSPSSSSSSSSS(0.001)DS(0.01)ES(0.989)DDEADVSEVTPR 246.9 1.1747999999999997e-121 29876000.0 865.51 962.56 1222.13 1223.94 1486.9 1104.58 1154.6599999999999 1220.83 1662.01 1641.5500000000002 1742.42 True False 1011.5869283121252 1011.5501925738255 1395.4464110310837 1523.8053549447538 1268.17897968452 1221.465922439138 1364.4467758388712 1393.8863911350718 1285.5673886845966 1270.7227148940112 1309.7290256544195 0.7723635259642165 0.7723354776140767 1.065446656291239 1.1634508551746945 0.9682758454947286 0.932609645593538 1.0417779167390075 1.0642555550287223 0.9815521863709554 0.9702180298394789 1.0 10.355052643155682 -5.75300985853619 24.999336266583498 1.0090959773011128 0.7723493548937631 0.7089070260576149 0.0610371480780875 76.38172246134033 226518.99268899305 0.008544506227427088 0.032034248702724324 1.765997731873424e-06 5.75300985853619 -0.23674662240734967 KVTSPSSSSSSSSSDSES(ph)DDEADVSEVTPR ddPTM_A549_PD325901_60min_R1 2 KVTSPSSSSSSSSSDSESDDEADVSEVTPR 30 1 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 KVTSPSSSSSSSSSDSES(1)DDEADVSEVTPR;KVTSPSSSSSSSSSDS(0.001)ES(0.999)DDEADVSEVTPR 302.34 7.096599999999997e-204 61986000.0 1935.21 1795.65 2230.69 1556.4699999999998 2110.6 2059.9 2089.41 2426.16 2196.6 2092.16 1535.01 True False 2131.6710945736945 1946.9757273342234 2382.0780376286707 1652.6096169001544 1962.3587371747208 2043.1248573576684 2168.923640919022 2377.7683355142985 2104.284540882266 1960.060660549741 1346.2135012301096 1.5834569276165102 1.4462607346867078 1.7694652708890786 1.227598456998146 1.4576876070412348 1.5176826376282457 1.6111290214643939 1.7662639197583447 1.5631135321102225 1.4559805400545496 1.0 10.394691515367963 -10.568453674663347 0.8587783038642547 0.9988210770861278 1.545780020071596 0.16885741402605714 0.19378539717893142 0.29182339265098745 0.3843069253950218 0.09927200211032622 0.0274472011747161 2.701135217729728e-11 10.568453674663347 0.5469589429854683 KVTVS(ph)AR ddPTM_A549_MK2206_60min_R1 2 KVTVSAR 7 1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 KVT(0.006)VS(0.994)AR;KVT(0.205)VS(0.795)AR 68.557 0.009485700000000001 42519000.0 5364.1 5753.4 5274.6 5096.7 7449.0 5507.8 4802.0 5362.4 6908.0 8031.1 8158.4 True False 6269.428940346239 6046.2234852417005 6022.617593565787 6345.391728799556 6353.261967630629 6090.63174021826 5674.461241905201 6122.536621661252 5343.349029809206 6216.868932158808 6132.444119614686 1.0223377201748003 0.9859402494843438 0.9820909047181338 1.0347247533008503 1.036008130479274 0.9931817757192946 0.9253180512082251 0.9983844128441799 0.8713245364468056 1.013766911022326 1.0 12.582246467301943 -7.634969357953564 4.944503046803763 0.9422049395291253 1.010703133861152 0.18321902543088064 0.042380287437421976 0.20726090344847375 8.213281282169715 0.007705260458256634 0.011506896318469687 2.317558161646779e-08 7.634969357953564 0.06849819433202675 KVTVS(ph)AR ddPTM_A549_PD325901_60min_R1 2 KVTVSAR 7 1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 KVT(0.003)VS(0.997)AR;KVTVS(1)AR 76.22800000000001 0.0074343000000000005 65917000.0 10680.7 11245.8 10302.0 11448.8 11943.8 11441.8 11526.1 11657.8 11010.7 10665.599999999999 11134.400000000001 True False 11764.996801284231 12193.523033138534 11001.15567095857 12155.966373888674 11104.908691873125 11348.621774316696 11964.732042823933 11425.276033632821 10547.958569740667 9992.17219579732 9764.939386776978 1.2048202590192825 1.2487044261278446 1.1265974355002748 1.2448583542002793 1.1372224907929938 1.1621804626544057 1.225274583785514 1.1700304099280083 1.0801867939932122 1.0232702733749732 1.0 13.253395373662258 -9.063008007088275 0.8703238320518696 1.0169029417027924 1.1958947711397923 0.7501357529683017 0.04045265129557581 0.1639315590508173 0.2607766239630353 0.010545210591747137 0.009304618126570591 8.649519715073688e-10 9.063008007088275 0.17899182943699987 KVVDYS(ph)QFQESDDADEDYGRDSGPPTK ddPTM_A549_MK2206_60min_R1 1 KVVDYSQFQESDDADEDYGRDSGPPTK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDY(0.008)S(0.535)QFQES(0.457)DDADEDYGRDSGPPTK 82.20700000000001 9.477600000000001e-07 3367500.0 495.22 271.98 506.91 387.68 356.82 511.73 556.6 295.28 840.26 718.89 895.4 True False 578.8010290334379 285.8226202794934 578.7974603485444 482.66161740361673 304.33225067659595 565.8809289411178 657.7270152529018 337.13684425707436 649.9424516194964 556.4922497092113 673.0474682171737 0.8599705910292124 0.4246693342991172 0.8599652887510493 0.7171286427718576 0.4521705600984393 0.8407741736850628 0.977237188032437 0.5009109463707093 0.9656710444823753 0.8268246683748711 1.0 9.394564447576927 -8.872352509185285 9.169478470129416 0.9848036652382252 0.7058506332581399 0.22846052045196996 0.1784185997934192 0.20904983412799943 16.243059511499325 0.028147799411245147 0.0299277923554166 1.3416755046641756e-09 8.872352509185285 -0.27895303198008525 KVVDYSQFQES(ph)DDADEDYGR ddPTM_A549_MK2206_60min_R1 9 KVVDYSQFQESDDADEDYGR 20 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDY(0.001)S(0.006)QFQES(0.994)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(0.999)DDADEDYGR 370.09 4.4671999999999977e-284 3349332200.0 111749.9 118514.3 104142.2 97577.0 146990.2 120260.90000000001 111744.5 114446.5 162808.4 159336.0 160397.0 True False 130610.55109725702 124546.17165449634 118911.1299345253 121483.36938039784 125368.13629674062 132986.82861527515 132047.02920576336 130669.64185270663 125932.55735159073 123341.88693634223 120565.99816800308 1.0833116557062574 1.0330124043840874 0.9862741713366667 1.007608871707896 1.0398299537324445 1.103021006220711 1.0952261102816236 1.0838017669842919 1.044511381858338 1.0230238111119114 1.0 16.87946357246372 -5.260801570398627 21.644765502606692 1.0338013983987537 1.0833117280102935 0.05897293058704023 0.03744041664786967 15.422956697326471 522476.6853615876 0.0058991852335405276 0.048244063512231934 5.485275304749747e-06 5.260801570398627 0.04951032961153978 KVVDYSQFQES(ph)DDADEDYGR ddPTM_A549_PD325901_60min_R1 10 KVVDYSQFQESDDADEDYGR 20 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYS(0.001)QFQES(0.998)DDADEDY(0.001)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDY(0.001)S(0.003)QFQES(0.988)DDADEDY(0.008)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR 335.69 1.6886999999999996e-206 11229999800.0 125571.8 129586.7 127974.1 138192.5 156479.1 140554.9 134525.3 142305.30000000002 155433.9 152670.9 153497.90000000002 True False 138319.7566949268 140507.42599356308 136659.19199677906 146728.33686706127 145488.54783958924 139410.26749522844 139644.73390656844 139466.9091551519 148901.55371894722 143031.23331902132 134618.6314033584 1.0274934104810403 1.043744276173482 1.0151580845247679 1.089955642376266 1.0807460031565859 1.035594152472943 1.0373358609489225 1.0360149089412936 1.1060991496250832 1.062492106983737 1.0 17.03851856917753 KVVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_A549_MK2206_60min_R1 7 KVVDYSQFQESDDADEDYGRDSGPPTK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDY(0.055)S(0.273)QFQES(0.672)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK 240.46 4.058099999999999e-112 965035600.0 13750.73 16273.78 16313.749999999998 14518.48 19872.5 14160.159999999998 14187.079999999998 11848.73 23231.200000000004 23983.2 25568.4 True False 16071.517050928804 17102.04589106556 18627.28505802029 18075.50825175933 16949.28157494157 15658.578732446522 16764.68879546198 13528.323762713777 17969.370292603304 18565.3784629442 19219.060628058956 0.8362280218558195 0.8898481680263473 0.9692089232928117 0.940499049436886 0.8818995841137204 0.8147421476773796 0.8722949118015839 0.7039014041593187 0.934976513179257 0.9659878191881861 1.0 14.23025020263509 -8.982959210660443 15.930220811620417 0.9713221924888994 0.866664567785924 0.3393630362767506 0.06587400059415732 1.8464436245817948 1726.2480541663422 0.012497395146809843 0.012747085699622239 1.0400178406799702e-09 8.982959210660443 -0.10465762470297535 KVVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_A549_PD325901_60min_R1 4 KVVDYSQFQESDDADEDYGRDSGPPTK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYS(0.034)QFQES(0.966)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK 213.15 7.305599999999997e-82 2095700000.0 24228.5 26722.550000000003 28344.1 27532.9 29248.9 35580.3 30576.100000000002 34750.0 33942.9 34746.1 35076.9 True False 26688.159483920987 28974.55307129738 30267.7010729195 29233.54470124725 27194.5581672272 35290.54583341088 31739.690217383915 34056.88398915235 32516.397952614312 32552.22531619348 30762.6636707894 0.8675503451043043 0.9418739996436033 0.9839102815293628 0.9502930244953359 0.8840118156949365 1.1471875846343214 1.031760141353502 1.10708501557656 1.0570085315300628 1.058173169415864 1.0 14.908892808020225 -7.241287154655372 24.962276578735747 1.0421478573880558 0.9310553165379245 0.6511837014032448 0.04967067975432329 507.59747941266767 628753.993846115 0.007709977292726818 0.013343919807156233 5.7373698300346565e-08 7.241287154655372 -0.11109254085013132 KVVDYSQFQES(ph)DDADEDYGRDSGPPTKK ddPTM_A549_MK2206_60min_R1 5 KVVDYSQFQESDDADEDYGRDSGPPTKK 28 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDYSQFQES(1)DDADEDYGRDSGPPTKK 185.28 4.9711999999999985e-67 672881800.0 14399.82 17484.4 15915.580000000002 11830.89 26072.199999999997 16851.55 16348.48 13822.52 29227.199999999997 26996.700000000004 29321.0 True False 16830.157574201923 18374.281278089475 18172.648564782874 14729.458581108825 22237.01391763449 18634.76983584643 19318.787197847225 15781.904539692132 22607.28586624776 20898.12671997755 22039.786481567728 0.7636261625436929 0.833686900436001 0.8245383220922303 0.6683122176989935 1.0089486999446073 0.8455059150156026 0.8765414861892549 0.7160643118249274 1.025748860369162 0.9482000534558278 1.0 14.427822626894296 -8.779974913209841 24.99859293476 1.0121592126013848 0.822306852952018 0.44296291284963063 0.08597982584632854 131.3421987057558 177138.5015490451 0.013851255151848305 0.01475856246545883 1.6596827753629655e-09 8.779974913209841 -0.18985235964936675 KVVDYSQFQES(ph)DDADEDYGRDSGPPTKK ddPTM_A549_PD325901_60min_R1 6 KVVDYSQFQESDDADEDYGRDSGPPTKK 28 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDYSQFQES(1)DDADEDYGRDSGPPTKK;KVVDY(0.002)S(0.003)QFQES(0.995)DDADEDYGRDSGPPTKK 337.42 4.2613999999999976e-247 1812750600.0 40504.75 35464.61 41965.41 44915.23 45563.5 60975.1 46175.33 52222.299999999996 59386.200000000004 56012.5 57665.94 True False 44616.76240197906 38453.337147759645 44813.43508111058 47689.54174721159 42363.27694554173 60478.53900183 47932.55745126009 51180.68525889817 56890.40453507346 52475.86119084694 50573.394954512 0.8822180603479239 0.7603471584683275 0.886106916915857 0.9429768713392827 0.8376593460582423 1.1958568147585729 0.9477820797748066 1.0120080984267004 1.124907762001014 1.0376179261456762 1.0 15.626091008314017 -7.237318477449688 24.819878576104355 1.055730646285928 0.8620753138994816 0.6245369937768142 0.07378866017753202 382.00523629385674 393075.0283457412 0.011385142856377187 0.019712492781751266 5.790039447065352e-08 7.237318477449688 -0.1936553323864464 KVVDYSQFQESDDADEDYGR ddPTM_A549_MK2206_60min_R1 1 KVVDYSQFQESDDADEDYGR 20 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 0 172.83 1.9190999999999999e-34 9260800.0 1750.1 1739.6 1446.7 1709.7 2174.2 1467.3 1748.7 1627.0 2067.0 1927.4 2252.5 False True 2045.4740941630362 1828.1382095676393 1651.8638138648666 2128.5765767513494 1854.378060145325 1622.5687120850885 2066.416154460564 1857.632232478528 1598.8278003207336 1491.9990013625645 1693.1420841625911 1.2080935872400245 1.079731126328843 0.9756203152211291 1.2571753999039716 1.0952288514300792 0.9583181041109096 1.2204623426406591 1.0971508238171823 0.9442962969711403 0.8812012974684816 1.0 10.725487330261647 -8.726035592641972 8.324491469764705 0.973709633922169 1.1089449242205436 0.38348146623757406 0.0934116877554229 0.204225858113527 42.415484380326546 0.014558438325531305 0.01642817755561972 1.8791628035415453e-09 8.726035592641972 0.13523529029837456 KVVDYSQFQESDDADEDYGR ddPTM_A549_PD325901_60min_R1 2 KVVDYSQFQESDDADEDYGR 20 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 0 ; 204.31 3.2627e-55 18583300.0 3864.7 4061.6000000000004 4704.0 4646.8 4827.6 4019.8 4218.9 4047.9 4552.8 4487.0 5085.6 False True 4257.041498958229 4403.885286186441 5023.241727449919 4933.8222823515 4488.526030315875 3987.0640815604434 4379.452548170661 3967.1614589838828 4361.461648788478 4203.69005424379 4460.103440274558 0.954471472683192 0.9873953250544663 1.1262612615865015 1.1062125236377434 1.0063726302364788 0.893939823358672 0.9819172597263951 0.8894774554241436 0.9778835193382851 0.9425095427798007 1.0 12.122861454682239 -6.996424579124843 24.816111864251692 0.9733922819952966 1.0468289769131158 0.3327118666428802 0.058002439627241685 110.61010054736853 767701.2493981292 0.008686011982884326 0.016357307037826813 1.0082666927624625e-07 6.996424579124843 0.07343669491781923 KVVDYSQFQESDDADEDYGRDSGPPTKK ddPTM_A549_MK2206_60min_R1 2 KVVDYSQFQESDDADEDYGRDSGPPTKK 28 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 0 ; 163.39 1.7873e-46 16446800.0 2688.5 2619.2 3019.5 2833.0 4410.2 2327.1499999999996 2623.1 1965.42 4803.5 4972.8 5076.0 False True 3142.253072485758 2752.506092492275 3447.710503881219 3527.085127178201 3761.4654221566116 2573.4074683628505 3099.683316043633 2244.0243038463113 3715.514919613278 3849.441026240406 3815.4891095268854 0.8235518389083785 0.721403210303903 0.903609053757391 0.9244123167253789 0.9858409535921929 0.674463324226851 0.8123947486323684 0.5881354236454803 0.9737978049356812 1.0088984441414721 1.0 11.897652293401851 -8.957944754951404 24.999987880481548 0.9884404722345239 0.8089214527406012 0.37917104550694003 0.10823692709783514 110.97791797331729 65971.76202036979 0.018818649985592392 0.02001688638746517 1.1016794413320173e-09 8.957944754951404 -0.17951901949392268 KVVEAVNSDS(ph)DSEFGIPK ddPTM_A549_MK2206_60min_R1 1 KVVEAVNSDSDSEFGIPK 18 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KVVEAVNS(0.393)DS(0.584)DS(0.023)EFGIPK 58.015 0.0026087 3485000.0 2294.8 2583.8 2114.7 2415.5 3172.1 2613.9 2649.5 2427.3 3606.8 3287.0 3534.9 True False 2682.106137526622 2715.3043836979023 2414.5962585055854 3007.2976084359148 2705.4882920554605 2890.5011630336085 3130.8798543165 2771.3772082944893 2789.8655588760616 2544.4644170793563 2657.0867717231263 1.0094160891054644 1.021910316439166 0.9087382031335449 1.1318025592689531 1.018216010424434 1.0878459799636548 1.1783129883583432 1.0430134377949747 1.04997156606475 0.9576143482244149 1.0 11.375629626939341 -6.255913911485527 24.992948343366674 1.046508027105164 0.9842104235095355 0.21344566886919603 0.06395945460061887 649.0105129325885 2935604.8196124868 0.00868552105407446 0.02225150523315031 5.547356651639869e-07 6.255913911485527 -0.06229760359562864 KVVEAVNSDS(ph)DSEFGIPK ddPTM_A549_PD325901_60min_R1 2 KVVEAVNSDSDSEFGIPK 18 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KVVEAVNS(0.002)DS(0.995)DS(0.003)EFGIPK;KVVEAVNS(0.177)DS(0.624)DS(0.2)EFGIPK 153.1 3.8185e-18 8718800.0 3266.7 3541.0 2965.3 2971.1 4382.6 3614.2 2961.3 4316.6 3352.8 3458.0 3517.2 True False 3598.332979182562 3839.4124971405813 3166.5430897974607 3154.6180991423225 4074.7812951492165 3584.7671534841893 3073.993891985539 4230.502026692809 3211.893475676069 3239.6612898540275 3084.606697367796 1.1665451489336216 1.244700823744203 1.0265629950487962 1.0226970270907696 1.3210051377462064 1.1621472379422626 0.9965594299619094 1.3714883100989326 1.0412651565649815 1.0502672164391476 1.0 11.59087083499961 -8.971486643334812 24.964956492273096 1.018205065682041 1.1600482767635112 0.21394625185753546 0.11385731208809728 179.7740738324988 157403.08116277252 0.018972493681663448 0.01989915704635476 1.0678576338441394e-09 8.971486643334812 0.14184321108147024 KVVNPLFEK ddPTM_A549_MK2206_60min_R1 1 KVVNPLFEK 9 1 P62424;Q5T8U3 P62424 RPL7A 60S ribosomal protein L7a 0 91.584 0.00052863 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVVNPLFEK ddPTM_A549_PD325901_60min_R1 2 KVVNPLFEK 9 1 P62424;Q5T8U3 P62424 RPL7A 60S ribosomal protein L7a 0 ; 96.171 0.00013213 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVVT(ph)SPR ddPTM_A549_MK2206_60min_R1 2 KVVTSPR 7 1 A0A075B754;Q96QE3 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 KVVT(0.624)S(0.376)PR;KVVT(0.5)S(0.5)PR 59.8 0.018175 119522000.0 3688.8 3599.0 4255.0 3639.5 4704.9 3260.8 3497.8999999999996 3402.3 5090.1 4953.0 4803.799999999999 True False 4311.37925749878 3782.1737274281068 4858.422981955488 4531.177663383365 4012.815442543341 3605.855691656142 4133.423152449021 3884.5864441067606 3937.2004772194323 3834.113859992104 3610.883881864707 1.193995541964736 1.0474370960594124 1.3454941064032597 1.2548666231392096 1.1113111287508564 0.9986074904723969 1.144712288647307 1.0757993253720224 1.0903702821886954 1.0618214225188871 1.0 11.818136311774587 -6.95304796097307 5.149684747902418 1.0521707222086845 1.207398561704446 0.4519422466313894 0.07596224760708464 0.13625854480362298 8.192801828178666 0.01145371165568538 0.0217941171549601 1.1141714841368e-07 6.95304796097307 0.15522783949576158 KVVT(ph)SPR ddPTM_A549_PD325901_60min_R1 1 KVVTSPR 7 1 A0A075B754;Q96QE3 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 KVVT(0.666)S(0.334)PR 68.22399999999999 0.014159 86558000.0 3442.0 3901.6 3176.4 3143.0 3649.5 3776.8 3818.0 3885.6 3840.0 3395.0 4239.7 True False 3791.429306133526 4230.4015246663885 3391.9696052448826 3337.1359717290993 3393.1717100915107 3746.042992994051 3963.2960792897657 3808.098659805767 3678.618153959707 3180.6391206056755 3718.2437776726506 1.0196828214708085 1.1377418420140035 0.9122504623319798 0.8975032760810274 0.9125737614265272 1.0074764369911218 1.0659053887452479 1.0241659470185032 0.9893429193774523 0.8554143597858782 1.0 11.860405644836126 KVVTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 KVVTSPR 7 1 A0A075B754;Q96QE3 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 KVVT(0.401)S(0.599)PR 68.016 0.0096559 79488000.0 4374.0 4025.2 3929.1 3783.0 4783.0 4410.9 4473.7 3769.1 3814.7 4106.3 4285.2 True False 4818.045260031384 4364.417730440626 4195.752353597681 4016.6673181836377 4447.058580454228 4374.979092829235 4643.949101602572 3693.922343698251 3654.381424976587 3847.0275172144597 3758.1475661209142 1.282026630211457 1.1613215430349617 1.116441619116211 1.0687891434581327 1.183311326182009 1.1641318005362418 1.2357016375479808 0.9829104043168387 0.972389018973134 1.0236499364460256 1.0 11.875806000896134 -8.274983671134224 24.552545830767393 0.9862933315683471 1.1665064039377289 0.7134350773538615 0.05418079486525698 238.56469313519014 432459.41422597604 0.00878294713021448 0.010648226043313709 5.309044051196521e-09 8.274983671134224 0.18021307236938178 KVVVS(ph)PTK ddPTM_A549_MK2206_60min_R1 4 KVVVSPTK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVVVS(0.995)PT(0.005)K;KVVVS(0.5)PT(0.5)K;KVVVS(0.911)PT(0.089)K;KVVVS(0.923)PT(0.077)K 110.38 0.0011214999999999999 10179480000.0 32552.4 35598.6 37486.0 31871.2 46121.2 32334.3 32796.1 34508.4 45208.600000000006 43193.700000000004 45543.9 True False 38046.44929023078 37410.41668608563 42802.078472757545 39679.645430752535 39336.8325763842 35755.89416422874 38754.72685040546 39400.07137754276 34968.92428329944 33436.21317067253 34234.09268230526 1.1113614034788204 1.0927824795374854 1.2502764092498022 1.1590681195784092 1.149054334269429 1.0444528060388778 1.132050649335211 1.1509015805728557 1.0214649065717463 0.976693423160441 1.0 15.063146156253348 -8.796783055252241 6.193505769465168 1.009684879197344 1.1366437127796118 0.6081962668732019 0.04875000042092534 0.09318962982252087 9.824615373893069 0.008555828551883535 0.009168256331582735 1.5966765418654182e-09 8.796783055252241 0.12695883358226778 KVVVS(ph)PTK ddPTM_A549_PD325901_60min_R1 4 KVVVSPTK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVVVS(0.986)PT(0.014)K;KVVVS(0.905)PT(0.095)K;KVVVS(0.5)PT(0.5)K;KVVVS(0.5)PT(0.5)K 96.229 0.0011214999999999999 14561140000.0 47454.600000000006 47759.8 54635.0 51010.2 55653.8 55210.5 56531.0 58893.9 52053.4 55454.4 60896.8 True False 52272.15605776986 51784.68595903271 58342.859646944424 54160.98420143033 51744.86908318701 54760.88399298295 58682.31813995018 57719.21496312922 49865.776618574564 51952.99972009288 53406.87965662095 0.9787532316782634 0.9696257540598118 1.0924221752339645 1.014119988841473 0.9688802157302614 1.0253526202067516 1.0987782569820146 1.080744940244298 0.9336957511688779 0.9727772911303604 1.0 15.704737975529651 -8.771747129483874 24.999913741670508 0.9686896627071212 1.0285070214216863 0.24751457659471654 0.046405682943028985 230.0888970977423 558044.853492105 0.00887073377834946 0.009492593164969703 1.6914254874208908e-09 8.771747129483874 0.05981735871456506 KVVVS(ph)PTKK ddPTM_A549_MK2206_60min_R1 1 KVVVSPTKK 9 2 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVVVS(0.856)PT(0.144)KK 65.574 0.0042893 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVVVSPT(ph)K ddPTM_A549_MK2206_60min_R1 2 KVVVSPTK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVVVS(0.379)PT(0.621)K;KVVVS(0.285)PT(0.715)K 56.403999999999996 0.011640000000000001 17928900000.0 7231.1 9441.0 9476.0 8600.4 11434.1 7780.5 7809.0 7509.0 11967.400000000001 12361.0 11692.3 True False 8451.532896578674 9921.50657422861 10819.839289544108 10707.498386086623 9752.159036660678 8603.82734572209 9227.794218666746 8573.423745348045 9256.803008010813 9568.641514912659 8788.779218936408 0.9616276260949758 1.1288833553642597 1.231096949873488 1.218314639536754 1.1096147478194196 0.9789559085958356 1.0499517610801317 0.97549654300971 1.053252423051656 1.0887338589978401 1.0 13.10144707038354 -7.098542880724792 5.32798736867239 1.02102928690225 1.1439477742370232 0.34587915408947756 0.07226637678207047 0.17326610713899532 7.492452409953635 0.010256238591067422 0.01803877055265596 7.96997793918471e-08 7.098542880724792 0.12291848733477329 KVVVSPTK ddPTM_A549_MK2206_60min_R1 2 KVVVSPTK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 103.7 0.001295 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVVVSPTK ddPTM_A549_PD325901_60min_R1 2 KVVVSPTK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 91.867 0.0041486000000000006 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KVYEDSGIPLPAES(ph)PK ddPTM_A549_MK2206_60min_R1 4 KVYEDSGIPLPAESPK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK 130.05 1.9980999999999998e-10 583524500.0 8242.39 9994.19 9700.4 8715.07 12810.490000000002 9358.3 9562.21 10045.779999999999 14858.8 13505.5 14177.93 True False 9633.503924911985 10502.851582363071 11076.062583821624 10850.262541234351 10926.083890953485 10348.589094463216 11299.53978174892 11469.800078910977 11493.305524627825 10454.598170022893 10657.158690038319 0.903946746511039 0.9855208022923141 1.0393072774805232 1.0181196374017152 1.02523423069289 0.971045791420603 1.060276956587975 1.0762531001468776 1.0784587016960803 0.980993008933538 1.0 13.379535231325704 -7.76668900512501 24.99954353683454 1.043138634793793 0.9953502450939709 0.2312948464422745 0.0434285875681213 159.2994011020977 758608.6207487972 0.007110617237362575 0.009983065355809104 1.7112402821986164e-08 7.76668900512501 -0.04778838969982213 KVYEDSGIPLPAES(ph)PK ddPTM_A549_PD325901_60min_R1 4 KVYEDSGIPLPAESPK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK 198.96 2.1590999999999996e-39 941850300.0 14505.3 15095.0 15338.8 16601.8 18474.9 17803.1 16827.3 18903.0 16724.6 18115.3 19040.300000000003 True False 15977.86737776253 16367.108625907102 16379.783207697454 17627.25548057655 17177.286758944978 17658.117456198994 17467.67210975189 18525.964835883366 16021.723223363168 16971.496866423568 16698.46380640626 0.956846543670246 0.9801565470727891 0.9809155738873089 1.0556213843942917 1.0286746708014554 1.0574695768975209 1.0460646148210668 1.1094412666137585 0.9594728838000376 1.0163507891014838 1.0 14.02742776603201 -3.5917012809176887 14.09761697373537 1.0025732056080268 0.5470610198387837 0.0 0.04761384502105411 0.0 0.0 0.006899960946473116 0.0 0.0002560346354451266 3.5917012809176887 -0.455512185769243 KVYEDSGIPLPAES(ph)PKK ddPTM_A549_MK2206_60min_R1 2 KVYEDSGIPLPAESPKK 17 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDS(0.001)GIPLPAES(0.999)PKK;KVYEDS(0.001)GIPLPAES(0.999)PKK 83.064 3.3335e-05 85114000.0 6737.799999999999 6893.5 7707.0 6727.3 9775.099999999999 6573.8 6330.7 6685.5 9309.5 9508.3 9346.1 True False 7874.975916605739 7244.34970548087 8799.968489290468 8375.488801999976 8337.19573899667 7269.435152664721 7480.90624409189 7633.190098485064 7200.913114216673 7360.368426198857 7025.205430762261 1.1209602330093391 1.0311940023503101 1.2526279232713682 1.1922055354175178 1.1867547249920138 1.034764780092126 1.064866546298303 1.0865433294036548 1.0250110384936242 1.047708639802755 1.0 12.778324697840297 -7.9140073262436 0.8693665246931588 1.0108644160100952 1.1532033996310107 0.41247515773857923 0.0603662557922654 0.34428209214103234 0.5229367637035943 0.01203342380407213 0.019531529744742884 1.2189690355979225e-08 7.9140073262436 0.14233898362091546 KVYEDSGIPLPAES(ph)PKK ddPTM_A549_PD325901_60min_R1 2 KVYEDSGIPLPAESPKK 17 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PKK;KVYEDS(0.003)GIPLPAES(0.996)PKK 127.8 1.2123e-12 154859000.0 13321.5 13961.4 12821.099999999999 14486.1 16664.5 16495.8 15344.1 17491.3 14030.3 16234.6 18049.6 True False 14673.888873230024 15137.976175537568 13691.216945537453 15380.873496679893 15494.043009404031 16361.463673965065 15928.028122113694 17142.422299840593 13440.655282682525 15209.544585385824 15829.61362584152 0.9269897055020472 0.9563073700564069 0.8649116313986857 0.9716518583606445 0.978801086092861 1.033598422595439 1.006217112975614 1.0829337155681387 0.849082965660067 0.9608285423060834 1.0 13.950338421702677 -5.253537982410395 21.042911651911343 0.9516386057379279 0.9269896012949912 0.0 0.06644017551723021 711.5330534768794 1894472.0349977722 0.010704759054414701 0.1430415846939502 5.5777881793759486e-06 5.253537982410395 -0.024649004442936717 KVYEDSGIPLPAES(ph)PKKGPK ddPTM_A549_MK2206_60min_R1 2 KVYEDSGIPLPAESPKKGPK 20 3 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PKKGPK;KVYEDSGIPLPAES(1)PKKGPK 102.07 2.9606e-10 26748000.0 4588.9 5830.1 6124.9 5467.2 7608.9 4815.799999999999 5013.7 4472.2 7055.700000000001 7150.1 7689.5 True False 5363.394132166598 6126.82718762951 6993.502919431059 6806.6642454319335 6489.6408894488795 5325.404759530678 5924.624391616013 5106.148045538094 5457.595215637637 5534.887444039885 5779.98493059633 0.9279252794891367 1.0600074673546591 1.2099517565194635 1.1776266421389578 1.1227781676550728 0.9213527065340027 1.0250241934462554 0.8834189200924587 0.9442230872865907 0.957595480005662 1.0 12.496850016041625 -7.2537243779118015 24.52667846720524 0.9665384610776848 1.1079141076750032 0.4645997970061554 0.07642721344045914 339.51689394477984 1079353.434086305 0.011527280825722939 0.01972052013688778 5.575394753739881e-08 7.2537243779118015 0.14137564659731838 KVYEDSGIPLPAES(ph)PKKGPK ddPTM_A549_PD325901_60min_R1 2 KVYEDSGIPLPAESPKKGPK 20 3 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PKKGPK;KVYEDSGIPLPAES(1)PKKGPK 115.95 6.5436999999999994e-15 42270000.0 5760.4 5637.4 6128.0 6618.4 7170.5 7314.5 7923.5 8189.5 7140.7 7457.8 7362.7 True False 6345.191567417653 6112.483482457018 6543.882930657552 7027.203536523027 6666.868816882085 7254.933137114748 8225.033128405565 8026.153997961533 6840.6012114531495 6986.91323524389 6457.134576000762 0.9826636711275667 0.9466247621933251 1.0134344969329288 1.0882851292337998 1.03248100816434 1.12355303296282 1.2737899499532739 1.2429900451188283 1.0593865020062643 1.0820454728033944 1.0 12.65667837990682 -6.032461954316204 3.5278142685249376 1.0717737618066008 0.9654543343716585 0.24298466398570684 0.08571467431619498 0.3454855170735934 8.90663617245209 0.014502179034428832 0.04571444431554932 9.279787806855356e-07 6.032461954316204 -0.10631942743494227 KVYEDSGIPLPAESPK ddPTM_A549_MK2206_60min_R1 1 KVYEDSGIPLPAESPK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 0 76.85 0.00044664 2006200.0 963.84 1115.8 1062.7 910.91 1187.5 912.93 1241.9 864.11 1346.1 1600.8 1873.1 False True 1126.5126283744362 1172.5894540328657 1213.4068397001402 1134.0829908923042 1012.8203230717377 1009.5356466461114 1467.53715458602 986.6002387258891 1041.2104992799905 1239.178168196116 1407.9575750698987 0.8001040999538 0.8328301042555575 0.861820598280385 0.8054809398898274 0.7193542909284435 0.7170213538543536 1.0423163173174188 0.700731510803448 0.7395183759200267 0.8801246501582951 1.0 10.459388147644116 -10.867684430076597 1.0895407620479507 1.0011878618652261 0.7996604040962553 0.20029703168724444 0.09677588831083461 0.4174553590862856 0.8715213448769843 0.06442212645636466 0.015239653875304257 1.3561744868753542e-11 10.867684430076597 -0.20152745776897085 KVYEDSGIPLPAESPK ddPTM_A549_PD325901_60min_R1 2 KVYEDSGIPLPAESPK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 0 ; 103.61 1.0492e-06 6961200.0 2646.5 2780.2 2844.5 2947.0 3267.7 3338.8999999999996 2957.1 2882.6000000000004 3903.0 3604.8 3456.3999999999996 False True 2915.1707317496735 3014.497211112747 3037.544875368048 3129.0294968773956 3038.188024953014 3311.7091054087646 3069.6340586872093 2825.1042816440468 3738.9704830481114 3377.1923128009853 3031.2847119248413 0.9616947957021706 0.9944619188207385 1.0020651849094147 1.0322453329995807 1.002277355538731 1.0925100807524795 1.012651186017435 0.9319824926145351 1.2334606737332487 1.1141125409683128 1.0 11.565713647570071 -8.74398040067226 24.998365512187654 1.1102453419683695 1.0075292177507127 0.3862719442174972 0.06270147652033808 272.67420077623206 390424.0149562986 0.015016109753315026 0.017006962327577948 1.8030991112994272e-09 8.74398040067226 -0.10271612421765686 KWDGS(ph)EEDEDNSK ddPTM_A549_MK2206_60min_R1 3 KWDGSEEDEDNSK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK;KWDGS(0.999)EEDEDNS(0.001)K 262.24 1.3346999999999997e-82 324083000.0 55688.3 54317.4 42730.2 39675.8 80921.6 60191.4 55935.8 59010.5 78766.5 83036.1 80401.7 True False 65087.12359178299 57081.923651626435 48789.98488920196 49396.372781114376 69018.13983619523 66560.81399618233 66098.61081527715 67375.41908707692 60926.013514253995 64278.18733892391 60435.7389159669 1.0769641400808159 0.9445060931743751 0.807303522126902 0.8173371198422469 1.1420087033627861 1.1013485594795502 1.0937007141946955 1.1148274232364286 1.0081123290139433 1.0635790757568093 1.0 15.883114324937793 -6.756517221925019 24.999277376566187 1.034837591981433 0.9064387465181757 0.42410196919077836 0.08356899567785372 117.5957531090292 597252.7320256415 0.012936641943531849 0.02627293767720776 1.751792965572541e-07 6.756517221925019 -0.1283988454632573 KWDGS(ph)EEDEDNSK ddPTM_A549_PD325901_60min_R1 2 KWDGSEEDEDNSK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK 259.08 2.2018999999999996e-69 130257000.0 8647.2 7792.900000000001 7796.5 8125.0 7012.1 8488.6 7140.6 6423.5 9305.6 10146.2 10808.5 True False 9525.057378267808 8449.63503218493 8325.617374163116 8626.862796786165 6519.594286431756 8419.471655986363 7412.339440486253 6295.378253361735 8914.517993095697 9505.567200438678 9479.123020726673 1.00484584464625 0.8913941736708443 0.8783109319246784 0.9100908151442924 0.687784542111783 0.8882120885631173 0.7819646843150708 0.6641308736680083 0.9404369975580618 1.002789728506971 1.0 13.210537876256758 -8.978243871607646 22.75874725643236 0.973722566367419 0.8363289338540253 0.31745475153069747 0.09416319404155028 49.44214449372098 51722.046643010355 0.01670574318067161 0.017153774630722426 1.0513713260995297e-09 8.978243871607646 -0.13739363251339376 KWDGS(ph)EEDEDNSKK ddPTM_A549_MK2206_60min_R1 6 KWDGSEEDEDNSKK 14 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(0.999)EEDEDNS(0.001)KK 135.09 1.0762999999999999e-09 1064232000.0 27718.4 23612.600000000002 17848.0 20272.0 35317.6 25290.7 26300.2 26701.4 37220.3 36939.700000000004 38140.6 True False 32396.58827018384 24814.380482430926 20379.114778364645 25238.640910044658 30122.427824941835 27966.94508739204 31078.605904697037 30486.405219607994 28789.961478605594 28594.996114264144 28669.236392990762 1.1300122481847603 0.8655403353713915 0.7108356322788932 0.8803387911725183 1.0506881805999673 0.9755036619750911 1.084040240161239 1.0633839283930668 1.0042109627183633 0.9974104549661194 1.0 14.8072158583617 -6.751540988558009 24.42912304889993 1.0138379454963187 0.8811825911661949 0.282286884678128 0.09626872397990506 148.1995026574508 365750.9059648709 0.013318170786260925 0.027450144976738842 1.7719807983283566e-07 6.751540988558009 -0.13265535433012376 KWDGS(ph)EEDEDNSKK ddPTM_A549_PD325901_60min_R1 8 KWDGSEEDEDNSKK 14 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(0.999)EEDEDNS(0.001)KK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK 164.59 4.8972999999999996e-20 1341742300.0 57901.3 52444.00000000001 49056.9 50302.3 44504.50000000001 53833.5 45397.1 45257.4 57759.299999999996 59603.0 69644.3 True False 63779.39735131583 56863.63993223403 52386.19623710417 53409.3588261879 41378.65745219008 53395.097824440054 47124.71148274631 44354.70565325654 55331.87748437632 55839.65640808841 61078.49261159215 1.0442202258804776 0.9309928503612387 0.857686462078171 0.8744380639159927 0.6774669066462321 0.8742045774441091 0.7715434593715311 0.726191884520058 0.9059142607896453 0.9142278078665378 1.0 15.89837683708998 -9.485697555686539 1.4289668089799519 0.9759531672301588 0.8434725469966485 0.14667201383630057 0.09722296885947473 0.369253681899251 1.54470216094632 0.023676838958225633 0.018859686390798314 3.268153483815026e-10 9.485697555686539 -0.13248062023351026 KWLT(ph)SPVR ddPTM_A549_MK2206_60min_R1 1 KWLTSPVR 8 1 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;A0A1W2PRD7;C9J1B4;H7BXZ5;O60229-5;O60229-6;O60229-4;O60229 E7EPJ7 TRIO;KALRN Triple functional domain protein;Kalirin 1 KWLT(0.662)S(0.338)PVR 43.512 0.042352 3637600.0 1695.3 1908.9 1093.8 1193.4 2254.3 1807.6 1576.8 1751.7 2437.5 2261.7 2350.3 True False 1981.4251938944033 2006.0548564288738 1248.9172873473358 1485.7830535737623 1922.6954562531523 1998.8790322122288 1863.2841495702048 2000.0088393562623 1885.4101418876578 1750.780399181131 1766.6556450199064 1.1215684275992999 1.1355098329908373 0.7069387239488107 0.8410145224181597 1.0883249724829582 1.1314480203580963 1.0546957211625754 1.1320875378255884 1.0672199458918399 0.9910139557284259 1.0 10.78680514309334 -6.789336445958768 24.994165476180807 1.052843448955465 0.9469672421278702 0.17244817773885346 0.11886442631199068 320.69161428886963 287320.4875160812 0.017781182008919375 0.03360835867905029 1.6242899381899322e-07 6.789336445958768 -0.1058762068275948 KWLT(ph)SPVR ddPTM_A549_PD325901_60min_R1 1 KWLTSPVR 8 1 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;A0A1W2PRD7;C9J1B4;H7BXZ5;O60229-5;O60229-6;O60229-4;O60229 E7EPJ7 TRIO;KALRN Triple functional domain protein;Kalirin 1 KWLT(0.5)S(0.5)PVR 41.983999999999995 0.051637 4798300.0 1935.6 1675.0 1752.6 1883.3 2232.5 2254.3 1616.7 1965.8 2204.7 2205.1 2420.0 True False 2132.1006870865926 1816.1581284130116 1871.5419752399512 1999.627163715371 2075.69690170689 2235.9417282107825 1678.224403192186 1926.5905768597333 2112.044126050774 2065.8696096752788 2122.35534164394 1.004591759566098 0.8557276403141082 0.8818231040379351 0.9421735957591786 0.9780157266686035 1.0535190240475285 0.7907367679025239 0.9077606087241873 0.9951416167731937 0.9733853559484962 1.0 11.051450508638231 -8.771801210635795 23.157234632066604 0.9977057875042143 0.9248346873972031 0.13938334213694126 0.06845874025473132 101.18170069172893 226125.616034341 0.011647168270065702 0.01247614223756373 1.6912148733161412e-09 8.771801210635795 -0.07287110010701126 KWPQGAVPQLPPS(ph)APATSEMTTTPERPR ddPTM_A549_MK2206_60min_R1 2 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.22)APAT(0.189)S(0.189)EMT(0.14)T(0.14)T(0.121)PERPR;KWPQGAVPQLPPS(0.17)APAT(0.17)S(0.17)EMT(0.17)T(0.17)T(0.151)PERPR 76.47800000000001 3.1954000000000004e-06 41581500.0 7367.37 8436.4 8487.7 8075.179999999999 11977.4 9423.6 8562.5 7685.929999999999 12953.7 13189.2 12385.2 True False 8610.801941097048 8865.776725222137 9691.383488588388 10053.599462508602 10215.540326365839 10420.79909712059 10118.195415204767 8775.434114673444 10019.707632808271 10209.75055970278 9309.61302586926 0.9249366130654006 0.9523249463308728 1.0410081989077609 1.0799159357721935 1.0973109513767347 1.1193589967879012 1.0868545649629737 0.9426207179920953 1.0762754160635704 1.0966890386670474 1.0 13.184505484963623 -5.717547013457085 3.8224575989544154 1.046937788583113 0.9314567567991922 0.4594255582436181 0.04950223151773374 0.16467764319159614 4.899995276993038 0.007240263309515508 0.03068710614744499 1.916253612290785e-06 5.717547013457085 -0.11548103178392088 KWPQGAVPQLPPS(ph)APATSEMTTTPERPR ddPTM_A549_PD325901_60min_R1 2 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.174)APAT(0.174)S(0.174)EMT(0.174)T(0.174)T(0.132)PERPR;KWPQGAVPQLPPS(0.181)APAT(0.164)S(0.164)EMT(0.164)T(0.164)T(0.164)PERPR 65.893 0.00019262 15763500.0 1958.14 1934.85 2447.49 2482.13 2410.2 2199.56 2501.53 2740.05 2629.7599999999998 2354.71 2602.07 True False 2156.9289312935207 2097.906599856666 2613.591389352979 2635.445532773764 2240.9158667386096 2181.647512621794 2596.727093039741 2685.39755322236 2519.240332436742 2206.0332087426777 2282.0318858807655 0.9451791382227069 0.9193152001234922 1.1452913543950094 1.154867970548359 0.9819827148794256 0.9560109681726784 1.1379013190420504 1.1767572442073537 1.103946157818222 0.9666969258368817 1.0 11.156103234606242 -7.759295785396157 24.999976957729277 1.067994627897465 1.0231545240870903 0.09417385976261294 0.08955711749609545 159.6321229525592 1861702.2302238015 0.01474792663362857 0.02128177110179872 1.74062098304968e-08 7.759295785396157 -0.04484010381037473 KWPQGAVPQLPPSAPAT(ph)SEMTTTPERPR ddPTM_A549_MK2206_60min_R1 1 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.009)APAT(0.352)S(0.268)EMT(0.205)T(0.045)T(0.121)PERPR 88.544 1.1043e-09 35201000.0 7213.8 7118.7 6571.6 6176.8 10243.0 7486.6 7993.1 6816.4 10726.0 10671.0 11442.0 True False 8431.31307952307 7481.011423573899 7503.551696408616 7690.116277287088 8736.268268820051 8278.827042797126 9445.342805637745 7782.6455743495 8296.578125902368 8260.41368866863 8600.635616864982 0.9803127879281518 0.8698207617242135 0.8724415299835405 0.8941334826704602 1.0157700730500787 0.9625831638028215 1.0982145072064649 0.9048919081153158 0.9646470906910196 0.9604422343472835 1.0 13.070227568594659 -6.7513204115188845 24.87994753020345 0.9860330032667277 0.8994562611370202 0.36404968352054023 0.05229657630314615 150.08835470809396 369025.93287815724 0.006972089548250747 0.014380571862740076 1.7728810113610572e-07 6.7513204115188845 -0.08657674212970756 KWPQGAVPQLPPSAPATS(ph)EMTTTPERPR ddPTM_A549_PD325901_60min_R1 1 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.007)APAT(0.085)S(0.41)EMT(0.094)T(0.071)T(0.332)PERPR 126.34 3.8398e-22 34100000.0 8701.4 9584.3 9055.8 9167.8 10938.0 11387.0 9398.5 9632.7 12086.0 10295.0 11022.0 True False 9584.759722367879 10392.002597103778 9670.381044949198 9734.074184415529 10169.752614051496 11294.268047347821 9756.165060556532 9440.568241793038 11578.067450197144 9644.971943044304 9666.36387421468 0.991557926754187 1.0750684261767511 1.0004155824037655 1.0070047342601565 1.0520763284299304 1.1684091551193956 1.0092900688935784 0.9766410994496123 1.197768633672274 0.9977869722836071 1.0 13.238757588308781 -7.001578670094089 24.097270902799742 1.0845854594967865 1.0222940473911302 0.0 0.0715345913853897 71.31047032269574 1088567.4953859441 0.012230607946357207 0.02286538374387226 9.963715764699953e-08 7.001578670094089 -0.06229141210565636 KWPQGAVPQLPPSAPATSEMTTT(ph)PERPR ddPTM_A549_MK2206_60min_R1 2 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.008)APAT(0.143)S(0.143)EMT(0.112)T(0.112)T(0.483)PERPR;KWPQGAVPQLPPS(0.007)APAT(0.12)S(0.12)EMT(0.12)T(0.12)T(0.511)PERPR 93.04299999999999 4.6518000000000004e-10 49133000.0 11819.900000000001 12222.3 11986.8 12365.0 17747.3 14545.6 13742.8 13001.900000000001 19944.6 19012.5 18232.4 True False 13814.810151190044 12844.362864335797 13686.708484160758 15394.425555085949 15136.695679706141 16084.805737412162 16239.688870315455 14844.959141648787 15427.179944981564 14717.563045245277 13704.791891358946 1.008027722033522 0.9372169213626906 0.9986805047941232 1.1232878016040755 1.1044819797117846 1.1736628957900372 1.1849642810377001 1.0831947875843875 1.1256777970272287 1.0738990538429771 1.0 13.742392800410403 -6.118508586885139 5.033626479506206 1.0858762681393133 0.9716259308618378 0.5046801319431399 0.05307994892029096 0.1990046214677846 7.367857412674805 0.009713096887462795 0.026723842231108033 7.611870886401498e-07 6.118508586885139 -0.11425033727747547 KWPQGAVPQLPPSAPATSEMTTT(ph)PERPR ddPTM_A549_PD325901_60min_R1 3 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.015)APAT(0.15)S(0.121)EMT(0.097)T(0.152)T(0.465)PERPR;KWPQGAVPQLPPS(0.051)APAT(0.132)S(0.083)EMT(0.042)T(0.135)T(0.557)PERPR;KWPQGAVPQLPPS(0.009)APAT(0.038)S(0.142)EMT(0.222)T(0.127)T(0.463)PERPR 103.78 4.406300000000001e-15 157615000.0 40677.0 41034.0 42190.0 42730.0 48846.0 49901.0 43163.0 46905.0 51380.0 48770.0 52315.0 True False 44806.499095175306 44492.079188835545 45053.267109079956 45369.33505312897 45415.22546955196 49494.622800623794 44805.591584699876 45969.44297873934 49220.67727876296 45690.653876859724 45880.586652108606 0.9765894981884689 0.9697364928264437 0.9819679824649621 0.9888569079803573 0.989857122227201 1.0787704868710324 0.9765697183525589 1.00193668680186 1.072799649489679 0.9958602801509698 1.0 15.485596218040868 -7.026564682057551 23.38952693138484 1.0305871729147948 0.9801169316753563 0.27216477652677107 0.0304269658733349 289.3157270949025 254735.2563002469 0.005021187493888698 0.008719748966399096 9.406657206684415e-08 7.026564682057551 -0.05047024123943855 KWS(ph)LNTYK ddPTM_A549_MK2206_60min_R1 1 KWSLNTYK 8 1 P53367;P53367-2 P53367 ARFIP1 Arfaptin-1 1 KWS(0.965)LNT(0.034)Y(0.001)K 83.397 0.0014044 5270300.0 4441.3 3750.7 2792.7 2895.4 5204.0 3515.7 2657.9 3049.6 5033.4 5051.1 4588.4 True False 5190.882860640135 3941.594609465018 3188.746853515181 3604.7731299794445 4438.498493697117 3887.729040467213 3140.8060255851383 3481.8901390083097 3893.3429366881383 3910.0530018586937 3448.9736466022778 1.505051471110509 1.142831176268349 0.9245494979808104 1.0451727091422258 1.2869041484470778 1.1272133216492306 0.9106494706560812 1.0095438515276738 1.1288410221758658 1.1336859606656153 1.0 11.751951389957966 -7.537654657940246 24.821794726955225 1.0462418429822593 1.1620099114470996 0.1728399620184864 0.1477164747251128 366.3222810149768 615376.5649544277 0.022776720911624047 0.03379060115043877 2.8996484121183104e-08 7.537654657940246 0.11576806846484033 KWS(ph)LNTYK ddPTM_A549_PD325901_60min_R1 2 KWSLNTYK 8 1 P53367;P53367-2 P53367 ARFIP1 Arfaptin-1 1 KWS(1)LNTYK;KWS(0.995)LNT(0.005)YK 91.93700000000001 0.0010865 28457000.0 11772.4 11863.099999999999 9990.7 10523.1 11432.099999999999 11508.599999999999 10114.400000000001 9378.8 14119.5 11788.3 12113.7 True False 12967.525381617175 12862.845070553074 10668.7289809596 11173.087987305902 10629.14873460396 11414.877777264168 10499.30902681205 9191.732476473735 13526.106516883874 11043.984726196137 10623.79169507116 1.2206117885042282 1.2107584033787775 1.004229872646062 1.0517043545281093 1.000504249300679 1.074463628890618 0.9882826516339864 0.8652026263596809 1.2731901100018013 1.0395520773736482 1.0 13.375011144126102 -5.712152493406185 12.47269833698779 1.0808515038200632 1.2158973188287496 0.2304320057547833 0.1016121716708392 1.471151651678526 367.85408925406455 0.01766204420651663 0.06837517147340076 1.9402044958238005e-06 5.712152493406185 0.1350458150086864 KYDLESAS(ph)AILPSSAIEDPDLGSLGK ddPTM_A549_PD325901_60min_R1 2 KYDLESASAILPSSAIEDPDLGSLGK 26 1 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 KYDLES(0.022)AS(0.967)AILPS(0.004)S(0.008)AIEDPDLGSLGK;KYDLES(0.038)AS(0.961)AILPSSAIEDPDLGSLGK 175.04 1.4077999999999998e-48 79545000.0 13755.7 12586.599999999999 12929.099999999999 15141.9 14417.0 14179.1 15069.099999999999 15527.7 16995.7 16416.1 17414.7 True False 15152.168537588885 13647.316954676538 13806.546474994208 16077.180773250033 13404.399655949941 14063.630110665626 15642.562846627923 15217.98784225501 16281.429833138807 15379.58464441085 15272.802300878824 0.9921013995392975 0.8935699346996228 0.903995625884567 1.052667379340393 0.8776647135135527 0.9208284002901275 1.0242103929890995 0.9964109756975863 1.0660407639927314 1.006991666717632 1.0 13.898677176108546 -7.770554043065964 23.81256486376399 1.0283411262742121 0.9386536367550032 0.37882727952499595 0.04939983721408914 77.65853878338443 202887.10287416345 0.007752525248933927 0.010800286512837801 1.6960785312216347e-08 7.770554043065964 -0.08968748951920891 KYDSDS(ph)DDD ddPTM_A549_MK2206_60min_R1 1 KYDSDSDDD 9 1 O14530 O14530 TXNDC9 Thioredoxin domain-containing protein 9 1 KYDS(0.071)DS(0.929)DDD 46.606 0.053547000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 KYDSDS(ph)DDD ddPTM_A549_PD325901_60min_R1 1 KYDSDSDDD 9 1 O14530 O14530 TXNDC9 Thioredoxin domain-containing protein 9 1 KYDS(0.06)DS(0.94)DDD 45.358999999999995 0.03845 8094800.0 3939.6 3751.0 3256.5 3727.8 4611.5 3578.4 3911.8 4049.2 3723.1 4086.0 4315.2 True False 4339.5452918197625 4067.1099341356444 3477.505672925313 3958.0577395519363 4287.604148811346 3549.258696814737 4060.6656896190952 3968.435529464049 3566.6310544290063 3828.0092626788796 3784.457756306582 1.1466755797678436 1.0746876292536331 0.918891396562757 1.0458718248224756 1.1329507223766204 0.9378513185673961 1.0729848107967987 1.0486140379955038 0.94244176685165 1.011507991151367 1.0 11.885870887824515 -8.748082438232492 24.627938314643412 0.9728197237300609 1.0439606672315607 0.13798299364864053 0.06764971766409562 234.69197170002727 432731.9666260076 0.011205745550006087 0.012669085486014475 1.786148494096653e-09 8.748082438232492 0.0711409435014998 KYEQGFITDPVVLS(ph)PKDR ddPTM_A549_MK2206_60min_R1 2 KYEQGFITDPVVLSPKDR 18 2 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 KYEQGFIT(0.001)DPVVLS(0.999)PKDR;KYEQGFITDPVVLS(1)PKDR 92.336 9.6485e-07 12668100.0 2587.6 3387.6 3230.4 2997.0 4109.3 3385.7 3044.6000000000004 2912.1000000000004 4920.9 4707.8 4432.7 True False 3024.3236192539143 3560.014370390513 3688.519295160754 3731.2651345404447 3504.827413556795 3743.972526754232 3597.764410059261 3324.8990929322226 3806.3240070625525 3644.3047102908995 3331.9382537036686 0.9076769702716369 1.068451483587165 1.1070191024880855 1.1198482235956497 1.051888464517897 1.1236620374319843 1.0797812372603572 0.9978873675814306 1.1423753134775452 1.0937491732447369 1.0 11.702145950101167 -5.262476818571178 6.257889229037379 1.0733837844973342 0.9039155205051428 0.5378591638804373 0.04530903892104446 0.09156453171920538 19.3469646774084 0.007634852229544236 0.06575519653044437 5.464157152511773e-06 5.262476818571178 -0.1694682639921914 KYEQGFITDPVVLS(ph)PKDR ddPTM_A549_PD325901_60min_R1 2 KYEQGFITDPVVLSPKDR 18 2 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 KYEQGFIT(0.007)DPVVLS(0.993)PKDR;KYEQGFITDPVVLS(1)PKDR 107.74 8.1566e-10 29517000.0 4496.700000000001 4235.6 4775.5 4171.4 4895.3 4963.799999999999 4593.799999999999 4695.9 4777.8 5433.5 4891.4 True False 4953.201673704422 4592.548876839493 5099.594147414353 4429.057904063236 4551.4710158681955 4923.376458542641 4768.619572823812 4602.2365906377145 4577.005681247055 5090.4278827130875 4289.788809139324 1.1546493065466785 1.070576916759898 1.1887751062592526 1.0324652567108201 1.0610011863920576 1.1476966996728297 1.1116210575831487 1.0728352362784679 1.0669536158740076 1.1866383426307643 1.0 12.066690908725553 -10.541666255962816 0.22412484526582058 0.9381163032012201 1.1290434541141177 0.0 0.07067950695881973 3.6966010804985925 0.2839110811540454 0.20367580184060372 0.044057756622812645 2.8729875502808643e-11 10.541666255962816 0.19092715091289758 KYES(ph)DEDS(ph)LGSSGR ddPTM_A549_MK2206_60min_R1 1 KYESDEDSLGSSGR 14 1 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 2 KY(0.016)ES(0.984)DEDS(0.885)LGS(0.055)S(0.061)GR 73.279 0.0016864999999999998 4256200.0 1215.6 1145.3 1015.2 1015.9 1627.4 1164.7 1110.5 1232.8 1697.6 1521.6 1848.0 True False 1420.7635614333967 1203.5908780281777 1159.1706254479936 1264.7955456054847 1388.0116158037442 1287.9477809347115 1312.26347545517 1407.553175291659 1313.0963105101482 1177.8695032029036 1389.0905977946586 1.0228012223889662 0.866459595896061 0.8344816582073988 0.9105205575600996 0.9992232457748779 0.9271877464144362 0.9446925042459717 1.0132911255222028 0.9452920584120574 0.847942895209936 1.0 10.439924980976803 -6.665453221600247 6.411388245128766 0.9721177238170852 0.8990040950386219 0.05855560977961971 0.062309323972364716 0.1972260740470439 11.15553741586961 0.006999677025263055 0.014646776929643801 2.1604627283749513e-07 6.665453221600247 -0.07311362877846328 KYES(ph)DEDS(ph)LGSSGR ddPTM_A549_PD325901_60min_R1 1 KYESDEDSLGSSGR 14 1 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 2 KYES(0.996)DEDS(0.997)LGS(0.006)S(0.001)GR 104.21 3.9101e-05 12812000.0 3871.8 3430.8 3181.6 3112.5 3943.2 3642.6 3285.9 3428.2 3186.3 3087.7 3749.1 True False 4264.862285731485 3719.9255563936463 3397.5225085150237 3304.752055999622 3666.2432353015056 3612.935873300182 3410.9467226134716 3359.821861629126 3052.390891656725 2892.7420950498226 3287.9844675030176 1.2971053628396043 1.1313695648990265 1.0333146467371217 1.0050996556286467 1.11504274777969 1.098829969851999 1.037397456200222 1.0218484590897912 0.928347114113587 0.8797918979363816 1.0 11.682987768380801 -2.0000000000000004 0.3601734845403908 0.9754038001343673 4.5605129081130915 0.6737349155290817 0.06059984512238169 24.191789768981888 0.294850383325241 0.01560258775932896 60.35596513131397 0.00999999999999999 2.0000000000000004 3.5851091079787243 KYES(ph)DEDSLGS(ph)SGR ddPTM_A549_PD325901_60min_R1 2 KYESDEDSLGSSGR 14 1 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 2 KYES(0.999)DEDS(0.138)LGS(0.717)S(0.145)GR;KYES(0.994)DEDS(0.082)LGS(0.763)S(0.161)GR 77.221 0.00018221 47716000.0 12348.8 12853.6 11781.5 12378.1 13812.400000000001 12849.0 13218.3 12428.5 14095.0 14474.4 14231.0 True False 13602.44108529391 13936.817981713128 12581.06343791481 13142.667124295247 12842.26467419317 12744.36200407237 13721.329639831294 12180.603817530371 13502.636166682842 13560.483913783439 12480.67721774171 1.0898800480119442 1.116671614734292 1.008043331176805 1.0530411847854295 1.0289717817505488 1.021127442183652 1.099405857586474 0.975956961711599 1.081883292958525 1.0865182775904778 1.0 13.607408598378612 -5.753217517224791 24.999999999670237 1.0368673692404033 1.1032758536247393 0.30257575032616857 0.03721362418566799 157.11466190380114 477723.13076011493 0.005017537180123569 0.01878094357849695 1.7651535187248167e-06 5.753217517224791 0.066408484384336 KYES(ph)DEDSLGSSGR ddPTM_A549_PD325901_60min_R1 3 KYESDEDSLGSSGR 14 1 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 KYES(0.916)DEDS(0.084)LGSSGR;KYES(0.884)DEDS(0.021)LGS(0.096)SGR;KYES(0.99)DEDS(0.01)LGSSGR 191.96 9.0604e-27 87530700.0 18673.2 17022.6 16255.099999999999 17446.4 20830.4 18975.6 18211.9 18882.9 20468.6 19642.6 20245.3 True False 20568.889517516713 18457.154242819906 17358.26883585698 18524.024504350786 19367.344564978815 18821.069004940127 18904.963820434066 18506.265746151515 19608.375923473886 18402.362883772916 17755.256445530606 1.1584676110208683 1.0395318310069233 0.9776411221718199 1.0432980543637091 1.0907949780614974 1.0600280014360373 1.064753070643081 1.0422978571402135 1.1043701893931108 1.036445907735971 1.0 14.115958577420214 -5.258483087432627 24.396305521254302 1.0486329872977718 1.1584676671536949 0.46854120081071227 0.03434972146363517 171.3483344466726 1413914.349400733 0.00588773750693764 0.05672534309217448 5.514636774070692e-06 5.258483087432627 0.1098346798559231 KYESDEDS(ph)LGSSGR ddPTM_A549_PD325901_60min_R1 1 KYESDEDSLGSSGR 14 1 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 KYES(0.264)DEDS(0.736)LGSSGR 174.68 3.7872e-23 92974000.0 13705.0 14430.0 12983.0 13662.0 16919.0 15490.0 14721.0 14585.0 16911.0 15015.0 15731.0 True False 15096.321510912248 15646.066742089395 13864.104453121254 14505.87071134678 15730.667807381367 15363.854575693129 15281.21571064029 14294.09073328885 16200.289479586632 14066.950337524073 13796.186727025133 1.0942387059273633 1.1340863277416042 1.0049229346804271 1.0514405899516754 1.1402185341958884 1.1136305183226547 1.1076405395924482 1.036089972984229 1.1742584962156346 1.0196259746157643 1.0 13.75198194001421 KYGGSVGSQPPPVAPEPGPVPS(ph)SPSQEPPTKR ddPTM_A549_MK2206_60min_R1 2 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 32 2 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 KYGGSVGSQPPPVAPEPGPVPS(0.535)S(0.376)PS(0.088)QEPPT(0.001)KR;KYGGSVGSQPPPVAPEPGPVPS(0.541)S(0.382)PS(0.074)QEPPT(0.004)KR 193.89 7.042299999999999e-78 76833000.0 3163.6 2792.5 2606.5 2858.2 4023.4 2978.7 2439.3 2144.74 3447.5 4435.2 3936.7 True False 3697.5383374059656 2934.6263222681287 2976.1408936467633 3558.4591283094715 3431.5631897657504 3293.904056898964 2882.4892351893695 2448.7634629907807 2666.646754526236 3433.2852396198205 2959.108742607266 1.2495445956974431 0.9917264208690195 1.0057558381664915 1.2025442245742273 1.159661062926064 1.1131405917839676 0.9741072349539993 0.8275341246273968 0.9011655151870687 1.1602430117504767 1.0 11.530946998949112 -7.807344559979637 4.602657733531988 0.9410170187647248 1.1154128478433023 0.31348615734636476 0.104923286067716 0.13496848667916927 6.18001232917526 0.013566231971268357 0.019231146535544103 1.5583156778323313e-08 7.807344559979637 0.17439582907857754 KYGGSVGSQPPPVAPEPGPVPS(ph)SPSQEPPTKR ddPTM_A549_PD325901_60min_R1 2 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 32 2 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 KYGGSVGSQPPPVAPEPGPVPS(0.508)S(0.394)PS(0.091)QEPPT(0.007)KR;KYGGSVGSQPPPVAPEPGPVPS(0.552)S(0.392)PS(0.055)QEPPTKR 187.45 1.1025999999999999e-76 60163000.0 2851.09 2570.58 2954.21 2836.21 3553.8199999999997 3020.8 3935.04 3953.5299999999997 3649.0 3491.5099999999998 2612.77 True False 3140.5305579384726 2787.211798051296 3154.700455707873 3011.3962501997416 3304.211943213429 2996.199606343048 4084.79010053651 3874.673742665715 3495.645219739319 3271.0554627351758 2291.4158537136527 1.3705633365714374 1.2163710020309566 1.376747241490501 1.3142076525826731 1.44199575902312 1.3075756639665235 1.782648965230982 1.6909517913940009 1.5255394231797756 1.4275258929686816 1.0 11.162023592124696 -10.718180338992028 1.0368958774099466 1.0067234665027627 1.4482296902505634 0.03585704293712377 0.20082087121797154 0.3590241519204626 0.7017018873413551 0.11151644579810134 0.03076624036787378 1.9134612031589533e-11 10.718180338992028 0.4415062237478007 KYGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_A549_PD325901_60min_R1 2 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 32 2 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 KYGGSVGSQPPPVAPEPGPVPS(0.154)S(0.684)PS(0.154)QEPPT(0.008)KR;KYGGSVGSQPPPVAPEPGPVPS(0.17)S(0.659)PS(0.17)QEPPTKR 210.47 3.8001999999999994e-101 60312000.0 2328.83 2753.85 3139.5299999999997 2848.53 3568.11 3276.24 2857.36 2509.65 3077.7799999999997 3112.06 3857.25 True False 2565.2511072059665 2985.926604137415 3352.597385327562 3024.477228618989 3317.4982629112556 3249.559387673911 2966.098398407389 2459.5930619676624 2948.431609868258 2915.564000492517 3382.8327031223525 0.7583145051300472 0.8826704913256297 0.9910621303362465 0.8940664508260779 0.9806864702026815 0.9606030427323732 0.8768090705962733 0.7270809046209881 0.8715865869296041 0.8618705849099346 1.0 11.724016115549889 -10.658153366281075 1.0780545088676443 0.9960992597205245 0.8871349311699832 0.0 0.08784471469066758 0.6144979828677011 1.3350396882672058 0.046364876548326765 0.01427418356632028 2.1970838599675902e-11 10.658153366281075 -0.10896432855054128 KYHNPK ddPTM_A549_PD325901_60min_R1 1 KYHNPK 6 1 Q99832-3;Q99832;Q99832-2;Q99832-4 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 44.11600000000001 0.040639999999999996 1381500.0 1120.1 901.18 673.54 651.91 944.65 980.99 888.2 1011.6 969.64 1251.4 1397.9 False True 1233.8117274259612 977.125601291485 719.2504747250472 692.1770001049684 878.3010428655832 973.0011426861981 922.0009370416899 991.4228444151528 928.8894028139306 1172.3863904347397 1225.9671620182082 1.0063986749815053 0.7970242854489872 0.5866800490324755 0.5645966886792423 0.7164148193167824 0.7936600366068752 0.752060059686979 0.8086862969339697 0.7576788608960593 0.9562951005186282 1.0 10.259704621090489 -10.69840292772916 0.48451800134771555 1.0567047160569927 0.7342752172303314 0.3739775423556949 0.11159335543874363 1.3014519074983515 0.4082908755941036 0.1999161434595234 0.02941051407127829 2.0026131899879368e-11 10.69840292772916 -0.3224294988266613 KYIEIDS(ph)DEEPR ddPTM_A549_MK2206_60min_R1 2 KYIEIDSDEEPR 12 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 KYIEIDS(1)DEEPR;KYIEIDS(1)DEEPR 107.34 5.5249e-05 6586100.0 1567.8 1816.6 1309.3 1348.4 3087.9 2451.5 1739.7 1890.6 2375.2 2242.5 2240.3 True False 1832.4063109701221 1909.057180674047 1494.9784277965505 1678.7580605319765 2633.674000516394 2710.916102826001 2055.78097095845 2158.5983397196724 1837.220992415 1735.9176925161112 1683.9716808654612 1.0881455619422142 1.1336634709277922 0.8877693400569662 0.9969039738656382 1.5639657308030515 1.6098347339384897 1.2207930776495606 1.2818495490436521 1.091004684515109 1.030847319014268 1.0 10.717652161653989 -8.975310279502267 2.8660020072745027 1.035737679651152 1.2252035702137873 0.13676303004747103 0.20505187502331274 0.40354607053285657 6.595753166431297 0.04217374356988446 0.04292260271174622 1.0584972169695114e-09 8.975310279502267 0.1894658905626354 KYIEIDS(ph)DEEPR ddPTM_A549_PD325901_60min_R1 2 KYIEIDSDEEPR 12 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 KYIEIDS(1)DEEPR;KYIEIDS(1)DEEPR 151.8 8.492700000000001e-13 24964000.0 5184.4 5789.9 5710.9 5857.6 6259.3 5408.9 5363.9 5911.1 6063.3 6141.0 6460.200000000001 True False 5710.716471446435 6277.835192655818 6098.476016431495 6219.410648425191 5819.66836141274 5364.8517117150805 5568.026149738707 5793.198473331759 5808.480586693726 5753.256211970383 5665.636354581899 1.007956761437412 1.1080547355600794 1.0763973602893788 1.097742646930639 1.0271870619981236 0.9469107044571315 0.9827715372582548 1.0225150558148157 1.0252123897779473 1.0154651396427208 1.0 12.468022290847303 -6.923895132170587 5.8321242434525935 1.0058486055253788 1.0747822087783065 0.5378406681373841 0.03150017299527909 0.1283037157034155 7.463895679610433 0.004548800635274238 0.008672573006299054 1.191529688512622e-07 6.923895132170587 0.06893360325292774 KYIEIDS(ph)DEEPRGELLSLR ddPTM_A549_MK2206_60min_R1 4 KYIEIDSDEEPRGELLSLR 19 2 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR 147.11 1.7702e-21 51100100.0 7188.700000000001 7734.1 6793.4 5332.1 9658.599999999999 6788.8 6355.799999999999 5503.2 10712.400000000001 9701.4 11151.6 True False 8401.976813159152 8127.7326549879745 7756.806271590222 6638.464739367066 8237.832734670048 7507.186309959275 7510.566589192222 6283.295452843171 8286.058504187627 7509.847002085084 8382.34995149724 1.0023414509982853 0.9696245923896571 0.9253737098156722 0.7919574794394398 0.9827593434223801 0.8955944757016919 0.8959977372276968 0.7495863915489307 0.988512595171189 0.8959118917176307 1.0 13.033139037907116 -8.954684245667128 24.99998230586419 0.9949324232338744 0.9012222210629742 0.06283140327847814 0.0780195203750061 124.74618551408025 68820.69380686274 0.012315036155256238 0.013105017943120731 1.109981535392833e-09 8.954684245667128 -0.0937102021709002 KYIEIDS(ph)DEEPRGELLSLR ddPTM_A549_PD325901_60min_R1 4 KYIEIDSDEEPRGELLSLR 19 2 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR 216.67 5.3440999999999993e-67 126947000.0 15277.899999999998 17866.9 15796.2 15312.5 18236.5 16633.3 15473.0 17945.199999999997 17558.5 19626.600000000002 19754.7 True False 16828.901161004454 19372.606366891014 16868.225122267097 16258.318347789316 16955.631152509617 16497.843919553037 16061.833482150472 17587.26890826293 16820.57730632852 18387.373126503484 17324.997135360973 0.9713653069907892 1.1181881425741071 0.9736350886799521 0.9384312286323832 0.9786801706248213 0.9522566607460105 0.9270901089713697 1.0151383443733246 0.9708848535389992 1.0613204136683037 1.0 14.080567493366434 -5.868125999283562 19.1207587591441 0.977380987054373 1.0452077822652535 0.21914999771430743 0.04719291645087946 1.5408407754076723 267.2493881017888 0.0050884225955836575 0.015820825024332037 1.354796296309287e-06 5.868125999283562 0.06782679521088042 KYILGNPLT(ph)PGVTQGPQIDKEQYDK ddPTM_A549_MK2206_60min_R1 2 KYILGNPLTPGVTQGPQIDKEQYDK 25 2 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 KYILGNPLT(1)PGVTQGPQIDKEQYDK;KYILGNPLT(1)PGVTQGPQIDKEQYDK 171.22 3.0104999999999995e-48 15365700.0 2748.9 2818.3 3113.8 3192.2 3822.2 2980.4 2934.2 2727.5 3971.9 3623.7 3776.6000000000004 True False 3212.847115847537 2961.739432067416 3555.3836618596933 3974.2891433033024 3259.9594432377253 3295.7839497705977 3467.3061591000096 3114.1314776184317 3072.270991820957 2805.103653231049 2838.765991142482 1.1317759638773548 1.0433193300570163 1.252439853426877 1.4000059024603928 1.1483720227061516 1.1609917689778246 1.221413166819209 1.0970018266159116 1.082255811647405 0.9881419116558159 1.0 11.471048212508201 -8.822105927482038 0.8221503597768246 1.0207108620496992 1.1992442180101832 0.4366219540711198 0.08606474659099048 0.3967346991888016 0.5525930900748239 0.022843414686432802 0.022780043714176804 1.5062396389260278e-09 8.822105927482038 0.17853335596048403 KYILGNPLT(ph)PGVTQGPQIDKEQYDK ddPTM_A549_PD325901_60min_R1 2 KYILGNPLTPGVTQGPQIDKEQYDK 25 2 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 KYILGNPLT(1)PGVTQGPQIDKEQYDK;KYILGNPLT(1)PGVTQGPQIDKEQYDK 171.22 3.0104999999999995e-48 8727500.0 3464.5 3749.6000000000004 3706.0 4628.9 5216.4 3725.8999999999996 3918.9 4484.299999999999 4934.5 4964.1 5680.9 True False 3816.2134895698973 4065.5919512223427 3957.5114459883957 4914.816640005349 4850.018059603054 3695.5575057182064 4068.0358840043646 4394.857118634704 4727.120125185987 4650.665878821395 4982.185314192176 0.7659718073310302 0.8160258390311498 0.7943324457874118 0.9864780874378716 0.9734720315977344 0.7417543251936252 0.8165163733304381 0.8821143416957179 0.9488045560490064 0.9334590316368966 1.0 12.282562968804841 -2.6927640824256596 0.03688322308789579 1.4645699768165878 6.667355256917711e-11 0.26717744505918517 0.07726332588202046 456.6941492699613 1.4025368895115597 16.76743413802265 45.48406085555965 0.0020287844971427936 2.6927640824256596 -1.4645699767499143 KYILGNPLTPGVTQGPQIDKEQYDK ddPTM_A549_MK2206_60min_R1 2 KYILGNPLTPGVTQGPQIDKEQYDK 25 2 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 124.19 7.3798e-18 13008900.0 2800.9 3561.2000000000003 3186.8 2492.5 4504.1 3711.1000000000004 3429.2 3234.8999999999996 4730.2 4164.6 4530.5 False True 3273.6234445695986 3742.449868884962 3638.7361595524653 3103.1626118925756 3841.5528565451928 4103.806138771194 4052.241251716226 3693.456981465761 3658.817252577231 3223.813967559685 3405.4518145609845 0.9612890220828508 1.0989583974975203 1.0685031994856033 0.9112337454384511 1.1280596718824603 1.2050695068490458 1.1899276431954515 1.0845717932854984 1.0743999480283086 0.9466626289572928 1.0 11.73363050357026 -3.8633857018208873 13.951106085542374 1.0583584683730494 0.5893653795910376 0.0 0.09211573970079655 0.0 0.0 0.011815860130950704 0.0 0.00013696648111036596 3.8633857018208873 -0.46899308878201174 KYILGNPLTPGVTQGPQIDKEQYDK ddPTM_A549_PD325901_60min_R1 2 KYILGNPLTPGVTQGPQIDKEQYDK 25 2 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 176.84 1.2163999999999998e-48 31358000.0 6036.4 5772.200000000001 6168.5 6407.2 8061.599999999999 8328.6 7513.1 7760.1 7367.9 7213.3 6537.200000000001 False True 6649.210884237187 6258.643551537666 6587.131504203834 6802.958192193024 7495.3810270101985 8260.774642938533 7799.015131826071 7605.31871781932 7058.252785562432 6757.851006970519 5733.165842725114 1.1597799656666925 1.091655766330105 1.1489518504967595 1.1865971400121598 1.307372092946026 1.4408748795258965 1.3603330770070674 1.3265478317655515 1.2311265676220997 1.178729377861211 1.0 12.485116296999943 -10.330996872237302 0.8825875945870251 1.0107606735661623 1.2513915834879619 0.1895400277699072 0.10990417919199535 0.4290165399935914 0.6407789872825596 0.059224941727215145 0.02169077689697778 4.66662741179138e-11 10.330996872237302 0.24063090992179959 KYKDIIRQPS(ph)EEEIIK ddPTM_A549_PD325901_60min_R1 2 KYKDIIRQPSEEEIIK 16 3 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 KYKDIIRQPS(1)EEEIIK;KYKDIIRQPS(1)EEEIIK 120.92 2.7441e-08 20014200.0 5560.200000000001 6001.4 7715.5 7266.7 7017.6 11337.7 8824.0 9791.599999999999 9996.8 7219.6 7550.1 True False 6124.667410797099 6507.159039915133 8239.12022707055 7715.5475551268955 6524.707985405724 11245.369530202457 9159.802148678074 9596.298856638397 9576.669260808436 6763.753223895353 6621.48556402724 0.9249687780142237 0.9827340068921674 1.244300866837419 1.165229083491989 0.9853843102600295 1.6983151924842277 1.383345483442693 1.4492667489562345 1.4463022184683025 1.0214857615398296 1.0 12.692939213993121 -5.572180002531376 1.013725374932646 1.2675260730398397 0.8177381485541039 0.24787433612427112 0.21045084046826093 1.5639375089514547 1.71658013221091 0.036034873219857357 0.6724232292379926 2.678058116945053e-06 5.572180002531376 -0.4497879244857358 KYKPLNT(ph)TPNATK ddPTM_A549_PD325901_60min_R1 2 KYKPLNTTPNATK 13 2 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 KY(0.013)KPLNT(0.493)T(0.493)PNATK;KY(0.003)KPLNT(0.863)T(0.134)PNATK 53.403 0.0076146 5510000.0 2772.9 3052.0 3725.8 3194.1000000000004 3655.2 4120.4 3830.1 4066.3 4416.9 3934.6 3997.6 True False 3054.40276669891 3309.2027509949316 3978.655193055468 3391.3923026725797 3398.471361755445 4086.8448285142645 3975.856551411141 3985.1944565493623 4231.273053183498 3686.168684516963 3505.9205428743053 0.8712127754597594 0.9438898316508634 1.134838951539271 0.9673329047817409 0.9693520774915312 1.1656980751662136 1.1340406899671382 1.1367041573857597 1.206893596542983 1.0514125004940593 1.0 11.7755775843248 -7.249399129635117 24.110697661546215 1.1105032990253596 0.9836633959955526 0.437213522417236 0.07794717385414986 478.0307382228171 957258.7512587628 0.014099215397538055 0.024296396222867816 5.631198938962359e-08 7.249399129635117 -0.12683990302980697 KYPS(ph)PQK ddPTM_A549_MK2206_60min_R1 3 KYPSPQK 7 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 KY(0.001)PS(0.999)PQK;KY(0.001)PS(0.999)PQK;KYPS(1)PQK 67.563 0.010153 446949400.0 28777.6 29041.9 28917.4 25834.4 36633.0 28393.3 28073.0 28454.8 40480.9 40523.7 41452.4 True False 33634.55533523013 30520.008662015643 33018.322147685 32163.829159750305 31244.334227441675 31397.86016005283 33173.500717202136 32488.35503917028 31312.04078471389 31369.368025068048 31158.625051960666 1.07946211616015 0.9795043462643152 1.0596848253933886 1.0322608621565728 1.0027507367651198 1.0076779738416959 1.0646651019382731 1.0426761445664607 1.0049237003397096 1.0067635517535174 1.0 14.927343952022094 -8.828168591492283 7.322418178960642 1.0022258485405946 1.0317293465929922 0.18289949388424165 0.027701539573460172 0.2618713546811644 24.1660411453555 0.004496342585614604 0.0047818846180160005 1.4853589195806648e-09 8.828168591492283 0.029503498052397603 KYPS(ph)PQK ddPTM_A549_PD325901_60min_R1 6 KYPSPQK 7 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 KYPS(1)PQK;KY(0.002)PS(0.998)PQK;KY(0.001)PS(0.999)PQK;KY(0.001)PS(0.999)PQK;KY(0.008)PS(0.992)PQK;KY(0.002)PS(0.998)PQK 75.682 0.0075378 772916700.0 34643.799999999996 34236.399999999994 33664.0 33114.1 43305.2 39097.100000000006 37372.6 37039.8 38497.700000000004 38427.6 42191.7 True False 38160.81307258237 37121.62158065623 35948.641478076985 35159.482749422365 40263.59214682966 38778.70618020219 38794.83474407143 36301.01213183904 36879.77554835799 36001.27477790477 37002.38837522258 1.0313067547319592 1.0032223110633987 0.9715221923930942 0.9501949547928572 1.0881349533045503 1.0480054905366343 1.0484413695319488 0.9810451088651024 0.9966863537125973 0.9729446221912483 1.0 15.175330774233824 -5.2591655022938895 20.85520909589648 1.0046780861024975 1.031306837825962 0.033053845300959894 0.038704785547461706 62.503554746447215 572783.1718876896 0.005164302679358731 0.04601132245465935 5.505978328830822e-06 5.2591655022938895 0.02662875172346446 KYQEDS(ph)DPERS(ph)DYEEQQLQKEEEAR ddPTM_A549_MK2206_60min_R1 1 KYQEDSDPERSDYEEQQLQKEEEAR 25 3 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 2 KY(0.001)QEDS(0.994)DPERS(0.991)DY(0.014)EEQQLQKEEEAR 72.533 1.0596e-05 19954000.0 1335.8 1512.5 1701.8 1278.9 2391.9 1738.7 1923.6 1638.7 2995.5 2020.7 2868.5 True False 1561.2503828255435 1589.479789590168 1943.1408297748173 1592.230557412003 2040.0546785307695 1922.688079944348 2273.0932205182926 1870.9907433082753 2317.0240328305536 1564.2224665629008 2156.1722834274774 0.7240842463403533 0.7371766170111007 0.9011992430799534 0.7384523814029249 0.9461464161332572 0.8917135679380962 1.0542261571533404 0.8677371273570617 1.0746006015564695 0.725462653696853 1.0 11.074256742212714 -6.843822372263152 0.5594382937958661 1.0325851176764356 0.7156112782103036 0.14372228534980946 0.1171581548679742 0.461543178382257 0.23486708868261244 0.014664597410851698 0.06966100100272193 1.4327737881977788e-07 6.843822372263152 -0.316973839466132 KYQEDS(ph)DPERS(ph)DYEEQQLQKEEEAR ddPTM_A549_PD325901_60min_R1 2 KYQEDSDPERSDYEEQQLQKEEEAR 25 3 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 2 KYQEDS(1)DPERS(1)DYEEQQLQKEEEAR;KYQEDS(1)DPERS(1)DYEEQQLQKEEEAR 184.36 1.9653e-57 146931000.0 11400.599999999999 15843.3 15280.800000000001 13880.8 14100.7 11016.2 11615.3 12175.7 13102.8 16204.400000000001 15945.1 True False 12557.980519321858 17178.470493066183 16317.846978915122 14738.185490415919 13110.315476774176 10926.487719609475 12057.326597636045 11932.846111848125 12552.134882214386 15181.251418539794 13983.953784316864 0.8980278906102902 1.2284415951325582 1.1668979482194615 1.0539355119254565 0.9375256582639395 0.781358969582954 0.8622258614125606 0.8533241954239669 0.8976098659802297 1.0856193929620757 1.0 13.771484701533847 -6.6758433635762975 3.5915872152237167 0.92192902122817 1.110446192986805 0.3742527991110337 0.10622124214991079 0.17385264242457443 4.391108264734615 0.01440903679723935 0.031103918594132546 2.109388803258433e-07 6.6758433635762975 0.18851717175863503 KYQEDS(ph)DPERSDYEEQQLQKEEEAR ddPTM_A549_MK2206_60min_R1 3 KYQEDSDPERSDYEEQQLQKEEEAR 25 3 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KYQEDS(1)DPERSDYEEQQLQKEEEAR;KYQEDS(1)DPERSDYEEQQLQKEEEAR;KYQEDS(0.999)DPERS(0.001)DYEEQQLQKEEEAR 134.63 2.449e-24 79141000.0 11107.1 11721.7 10189.8 10626.6 14571.6 11274.5 10781.4 11362.0 16821.8 17019.2 16527.2 True False 12981.706937476865 12318.28446257128 11634.866862874267 13230.117477046204 12428.136942881796 12467.560106592604 12740.24082329794 12972.598294665662 13011.689158894693 13174.550899652255 12423.040112484772 1.0449702182343152 0.9915676316775138 0.9365555256624813 1.0649661723099761 1.00041027239314 1.0035836633951694 1.025533259809279 1.0442370126156642 1.0473836549733384 1.0604933076254208 1.0 13.600730646385282 -7.764193025936225 23.503334967050886 1.0251466750674978 1.0054390923951257 0.11497838250450587 0.03412955477340823 76.56077278807332 653484.8655450988 0.005281526337871351 0.007484275712659771 1.7211034456619708e-08 7.764193025936225 -0.019707582672372048 KYQEDS(ph)DPERSDYEEQQLQKEEEAR ddPTM_A549_PD325901_60min_R1 4 KYQEDSDPERSDYEEQQLQKEEEAR 25 3 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KYQEDS(0.999)DPERS(0.001)DYEEQQLQKEEEAR;KYQEDS(0.999)DPERSDYEEQQLQKEEEAR;KYQEDS(1)DPERSDYEEQQLQKEEEAR;KYQEDS(0.994)DPERS(0.006)DYEEQQLQKEEEAR 224.58 1.1255999999999996e-95 219382000.0 20346.7 20092.9 19890.9 21005.3 23238.7 22057.300000000003 21748.8 21823.499999999996 21364.7 22166.0 23369.9 True False 22412.282005551126 21786.199199038692 21240.816087698495 22302.749674502462 21606.49388116279 21877.672661874516 22576.4624854 21388.21317229544 20466.81595674558 20766.43497712678 20495.550454001946 1.093519398556818 1.0629721435359027 1.036362313633349 1.0881751980536656 1.0542041273618938 1.0674352323922434 1.1015299411483597 1.0435539762787485 0.9985980129042713 1.0132167478854877 1.0 14.323023116855373 -8.623348684023137 3.6961851916261885 0.9992965487151382 1.0702637277869655 0.7300328111773494 0.01800636721730903 0.0733699787597998 1.9404921240404678 0.0028844278175222376 0.0032762284490825337 2.3804075331122997e-09 8.623348684023137 0.07096717907182737 KYQEQELPPS(ph)PPSAPR ddPTM_A549_MK2206_60min_R1 4 KYQEQELPPSPPSAPR 16 1 P10301 P10301 RRAS Ras-related protein R-Ras 1 KYQEQELPPS(0.987)PPS(0.013)APR;KYQEQELPPS(0.997)PPS(0.003)APR;KYQEQELPPS(0.987)PPS(0.013)APR;KY(0.001)QEQELPPS(0.993)PPS(0.007)APR 82.635 8.0659e-05 150435300.0 24957.2 29526.8 27846.0 25728.699999999997 35571.0 27136.9 27268.1 27340.5 42427.5 36747.8 43127.0 True False 29169.36521504244 31029.5880008403 31794.981517163917 32032.23265500523 30338.553020618783 30008.508745983672 32222.360805996504 31216.099601769623 32817.73899279531 28446.446457544476 32417.37565535187 0.8998064965270189 0.9571900060860585 0.9808006007394001 0.9881192418398911 0.9358731978543153 0.9256921061415251 0.9939842493288574 0.9629434514886795 1.0123502698583606 0.877506148553644 1.0 14.984479681933031 -8.381689579105961 1.4773952177410654 1.005706417538239 0.952670305931644 0.0 0.04676781052048778 0.2659969273111097 1.1259327257453586 0.004846707298830483 0.006009687840218041 4.15250745577134e-09 8.381689579105961 -0.05303611160659505 KYQEQELPPS(ph)PPSAPR ddPTM_A549_PD325901_60min_R1 2 KYQEQELPPSPPSAPR 16 1 P10301 P10301 RRAS Ras-related protein R-Ras 1 KYQEQELPPS(1)PPSAPR;KYQEQELPPS(0.999)PPS(0.001)APR 117.22 6.2085e-08 62053000.0 23656.0 26222.0 25043.0 27864.0 31190.0 29750.0 27258.0 29254.0 30372.0 31437.0 34091.0 True False 26057.539705373234 28431.819966117015 26742.568575792593 29585.095996264572 28999.321999658663 29507.725863581047 28295.318106149927 28670.506020680954 29095.57046147508 29452.062454928033 29898.02312065437 0.8715472457900394 0.950959862843759 0.8944594252226027 0.9895335178808656 0.9699411189372297 0.9869457169292343 0.9463942813865426 0.9589432018625536 0.9731603438815681 0.9850839413720884 1.0 14.867762475065954 -2.0000000000000004 0.3112895221265194 0.9880982027357639 0.042150181832371715 0.6073086797024673 0.02418738796701452 22.542209705533924 0.28182198271680864 0.00732149867337009 12.228335233049329 0.00999999999999999 2.0000000000000004 -0.9459480209033921 KYS(ph)ASSGGLCEEATAAK ddPTM_A549_MK2206_60min_R1 2 KYSASSGGLCEEATAAK 17 1 Q9UHV7;J3QRB7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 KYS(0.804)AS(0.19)S(0.006)GGLCEEATAAK;KYS(0.444)AS(0.278)S(0.278)GGLCEEATAAK 118.24 4.9356e-10 41323000.0 5864.9 6494.900000000001 5230.299999999999 5195.3 6139.700000000001 5838.0 5255.799999999999 4996.5 8682.0 8726.2 7825.799999999999 True False 6854.7517369617735 6825.462668039124 5972.035187431674 6468.148733225881 5236.558263211407 6455.773285049238 6210.710827822858 5704.769176139498 6715.540862305085 6754.9453593908975 5882.4378789077045 1.1652909691644062 1.160311899342408 1.0152313225176985 1.0995694075101625 0.890202050749709 1.0974656116977124 1.0558055955154617 0.9697967566465492 1.1416254621888293 1.148324129968578 1.0 12.522198464707493 -5.748885292560121 24.457026762043846 1.050771834353192 1.162801555829625 0.2729886169619309 0.07295740241155112 178.97987179878226 348667.6358551039 0.009908498734063466 0.03781176682844698 1.7828495979940081e-06 5.748885292560121 0.11202972147643298 KYS(ph)ASSGGLCEEATAAK ddPTM_A549_PD325901_60min_R1 2 KYSASSGGLCEEATAAK 17 1 Q9UHV7;J3QRB7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 KYS(0.673)AS(0.326)S(0.002)GGLCEEATAAK;KYS(0.97)AS(0.027)S(0.003)GGLCEEATAAK 180.84 1.6053999999999998e-32 48316000.0 9547.599999999999 10401.599999999999 10946.7 9957.8 10619.0 11336.6 11078.3 12680.8 10177.5 12856.2 14208.099999999999 True False 10516.865323428357 11278.179336418367 11689.608889854608 10572.870690195361 9873.158073561237 11244.278488237755 11499.89076877837 12427.87149610485 9749.775068209618 12044.457337947188 12460.593772566637 0.8440099657676338 0.9051076972951734 0.9381261521895179 0.8485045643228251 0.7923505294986887 0.9023870526132765 0.9229007043064545 0.9973739392312244 0.7824486734873595 0.9666038037821585 1.0 13.605085196894256 -7.482768841544425 24.78263808666775 0.905816594847062 0.8685386415270634 0.1343419803407827 0.06704626813953757 1461.3397859337315 902915.5546737496 0.0131364084404359 0.020998001733934655 3.2902671269788396e-08 7.482768841544425 -0.037277953319998614 KYS(ph)EVDDSLPSGGEK ddPTM_A549_MK2206_60min_R1 1 KYSEVDDSLPSGGEK 15 1 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 KYS(0.997)EVDDS(0.003)LPSGGEK 61.942 0.0021064 4642500.0 2403.0 2142.8 2418.2 1886.6 2581.5 2542.8 2393.5 2399.5 3397.4 3416.0 3468.4 True False 2808.5676522906006 2251.859367361196 2761.1371222008843 2348.817084692692 2201.7647696923727 2811.8774082259683 2828.3679680341734 2739.636473160558 2627.894324532977 2644.3232274849643 2607.100557029756 1.0772763040219568 0.8637408945693744 1.0590834767595694 0.9009307594060261 0.8445262165878333 1.078545820046739 1.0848710688998144 1.0508365186657007 1.0079758210503822 1.0142774203146254 1.0 11.34823051399906 -7.286365882235042 24.99922691835186 1.0192090092136898 0.9478015306694799 0.2529383164654899 0.0728812257662897 982.8931759448091 985758.2949701521 0.01049904729330232 0.01678815927155008 5.171709447828667e-08 7.286365882235042 -0.07140747854420992 KYS(ph)EVDDSLPSGGEKPSK ddPTM_A549_MK2206_60min_R1 2 KYSEVDDSLPSGGEKPSK 18 2 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 KYS(0.995)EVDDS(0.005)LPSGGEKPSK;KYS(0.999)EVDDS(0.001)LPSGGEKPSK 147.26 2.2312e-17 48388000.0 9533.9 9112.0 8382.4 6587.299999999999 9464.9 8190.200000000001 7065.3 8052.299999999999 10098.8 9708.400000000001 10273.8 True False 11142.989238524076 9575.761879501222 9571.150365204152 8201.188795715136 8072.625748077212 9056.881527785239 8348.97355527547 9193.738184134518 7811.437924469769 7515.265697223366 7722.531917544779 1.442919156243094 1.2399769896380874 1.239379839073181 1.0619818581886205 1.0453340736264303 1.1727865452014459 1.081118685480274 1.190508279188502 1.0115125463868921 0.9731608463992844 1.0 12.914858213245775 -2.000000000001049 0.31288158110392844 1.0103788118696497 4.755907644114545 0.7479108949248731 0.06721126958653276 16.631152050917425 0.2078791024167545 0.020936312931650346 35.966514725889354 0.009999999999975848 2.000000000001049 3.7455288322448954 KYS(ph)EVDDSLPSGGEKPSK ddPTM_A549_PD325901_60min_R1 4 KYSEVDDSLPSGGEKPSK 18 2 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 KYS(0.971)EVDDS(0.029)LPS(0.001)GGEKPSK;KYS(0.999)EVDDS(0.001)LPSGGEKPSK;KYS(0.987)EVDDS(0.012)LPSGGEKPSK;KYS(1)EVDDSLPSGGEKPSK 140.11 2.3648e-14 106977000.0 15750.599999999999 16460.7 15899.9 16395.4 18830.8 16020.8 16966.2 18970.5 20978.2 28653.5 27570.899999999998 True False 17349.589317021106 17847.90095783167 16978.962827865857 17408.106621344978 17508.189570733317 15890.331916479308 17611.85802526087 18592.11849543065 20096.559207655613 26844.313119963088 24179.854086335094 0.7175224984846366 0.7381310447161946 0.7021945941957226 0.7199425835734438 0.7240816883435134 0.6571723658770756 0.7283690779264861 0.768909457809248 0.8311282250050013 1.1101933462507443 1.0 14.561517918199517 -9.511824905966034 0.5623082467792505 0.9928947682483648 0.7051169285537547 0.8784604867289897 0.04642951457587443 0.12707410273982175 0.08942401303275363 0.014925854207360166 0.00811132124001712 3.0773372513841444e-10 9.511824905966034 -0.28777783969461 KYS(ph)LGR ddPTM_A549_MK2206_60min_R1 1 KYSLGR 6 1 H0YBN3;Q9NTN9;Q9NTN9-2 H0YBN3 SEMA4G Semaphorin-4G 1 KYS(1)LGR 60.91 0.026438999999999997 16662000.0 1584.3 1689.8 1695.3 1372.5 2712.7 2255.4 2487.4 2651.3 3553.2 3175.1 3208.2 True False 1851.6911075838523 1775.8036022806368 1935.719032035049 1708.7625616138657 2313.6654234919592 2494.064930986647 2939.328382572886 3027.1298942657186 2748.4058732944513 2457.842704797279 2411.5153981844273 0.7678537358616688 0.7363849319053062 0.802698184507719 0.7085845534722077 0.9594238648585296 1.0342313936143097 1.2188719113242388 1.2552811798526242 1.1397007356302435 1.019210869085775 1.0 11.235724306793157 -6.999988742459912 2.457949718042519 1.0944796441456062 0.755127167661601 0.8151371268607431 0.07900163818888406 0.1126105501046643 1.3649185782708 0.014074166783166104 0.027872552710202704 1.0000259217799532e-07 6.999988742459912 -0.33935247648400513 KYS(ph)LGR ddPTM_A549_PD325901_60min_R1 1 KYSLGR 6 1 H0YBN3;Q9NTN9;Q9NTN9-2 H0YBN3 SEMA4G Semaphorin-4G 1 KYS(1)LGR 69.825 0.021584 29289000.0 7116.3 7250.8 7912.2 7529.9 9170.3 7023.0 7507.1 8548.0 9827.8 8141.6 9579.5 True False 7838.741537256829 7861.850362684816 8449.169471923742 7995.004821356324 8526.20976381756 6965.807016468226 7792.786798542747 8377.503434223725 9414.771743095105 7627.5379865458535 8401.282229453773 0.9330410910105185 0.9357917217829226 1.0056999921157372 0.9516410237150355 1.0148700556595764 0.8291361754336781 0.9275711237532621 0.9971696230907846 1.1206350990195488 0.9079016486084379 1.0 13.036393817898835 -8.526300262595393 6.184061214211357 1.0572206261533934 0.9445499740207229 0.064950669186286 0.06886647971056106 0.11070147317643612 17.966744360826812 0.010305576681756485 0.011959660599018679 2.976457853926733e-09 8.526300262595393 -0.11267065213267047 KYS(ph)LNGR ddPTM_A549_PD325901_60min_R1 1 KYSLNGR 7 1 K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644 K7ER53 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 1 KY(0.005)S(0.995)LNGR 40.994 0.046408 3426200.0 1724.9 1660.4 2011.8 1504.8 2099.0 2059.8 1954.9 1917.9 2382.0 2251.3 2215.5 True False 1900.010578195733 1800.327735174307 2148.332845936172 1597.748078351239 1951.5734811568934 2043.0256717245131 2029.2947892623263 1879.6459799365566 2281.892823628131 2109.152533790739 1943.0075452116325 0.9778709212314375 0.9265675471055441 1.1056739595430523 0.8223066772379477 1.0044085963363194 1.051475933152893 1.0444091142431953 0.9673899540785497 1.1744127444340866 1.085509183424715 1.0 10.92407578796222 -7.48789764638023 1.3920506757506612 1.0743492003741937 0.9641599729270899 0.2110688185770897 0.08022278683382932 0.4704480766997088 1.815558863936272 0.014766504197668407 0.02660603833604111 3.2516392231225414e-08 7.48789764638023 -0.1101892274471038 KYS(ph)SCSTIFLDDSTVSQPNLK ddPTM_A549_MK2206_60min_R1 1 KYSSCSTIFLDDSTVSQPNLK 21 1 Q8ND76;Q8ND76-3;R4GNF3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 KYS(0.492)S(0.492)CS(0.008)T(0.008)IFLDDSTVSQPNLK 149.74 2.4143e-22 14250000.0 1236.4 1163.3 1157.5 1159.4 1452.6 1390.0 1115.7 920.59 1781.2 1461.9 1756.6 True False 1445.0740929222216 1222.5070011439607 1321.6509051970572 1443.4530520474448 1238.924464247584 1537.0888773926756 1318.4082481452788 1051.086451688634 1377.7610439919156 1131.6557746663545 1320.3877403063286 1.094431619447607 0.9258697001081972 1.0009566620865744 1.093203918806884 0.9383035198131685 1.164119319250929 0.9985008250980953 0.796043782900304 1.0434518603393548 0.8570632247795723 1.0 10.366745933090268 -4.788853920923783 8.112771536424201 1.0082303941650237 5.54587511066688 0.03870209070917574 0.10114178685442025 26927.59975122097 15567.323845242096 0.01159397321597633 2205463.026257896 1.626095616488298e-05 4.788853920923783 4.537644716501856 KYS(ph)SCSTIFLDDSTVSQPNLK ddPTM_A549_PD325901_60min_R1 2 KYSSCSTIFLDDSTVSQPNLK 21 1 Q8ND76;Q8ND76-3;R4GNF3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 KYS(0.503)S(0.328)CS(0.085)T(0.085)IFLDDSTVSQPNLK;KYS(0.583)S(0.358)CS(0.036)T(0.024)IFLDDSTVSQPNLK 173.59 1.4331e-35 59196000.0 4971.6 4836.8 5410.1 5155.0 5281.3 5528.200000000001 5092.6 5749.3 4655.2 4874.3 5451.2 True False 5476.313172101517 5244.4141107510795 5777.261919574153 5473.412642145562 4910.359707495901 5483.180172068872 5286.401679777647 5634.6257012614005 4459.5581328940725 4566.535866146756 4780.736958003908 1.1454956045914795 1.0969886351874858 1.2084458882227067 1.14488889270136 1.0271135497791777 1.1469319940075209 1.1057712913753088 1.178610275101606 0.9328181349588545 0.9551949639273636 1.0 12.22301731368526 -8.764326943288843 24.99999979574811 0.9682752239751561 1.1297626254524824 0.7220548817049596 0.04668035093299343 29.717222561130523 257285.6486384882 0.008380781751267927 0.009113546955951093 1.7205728147319073e-09 8.764326943288843 0.16148740147732632 KYS(ph)SCSTIFLDDSTVSQPNLR ddPTM_A549_MK2206_60min_R1 3 KYSSCSTIFLDDSTVSQPNLR 21 1 Q8N7R7-3;Q8N7R7;H7BZD2 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 KYS(0.555)S(0.371)CS(0.061)T(0.012)IFLDDSTVSQPNLR;KY(0.001)S(0.422)S(0.422)CS(0.077)T(0.077)IFLDDSTVSQPNLR;KY(0.011)S(0.247)S(0.247)CS(0.247)T(0.247)IFLDDSTVSQPNLR 121.02 3.2365999999999998e-15 29508400.0 10490.72 11058.1 9913.43 9096.14 15517.0 11733.8 10959.460000000001 10392.380000000001 15205.9 14879.2 17654.5 True False 12261.297062521026 11620.91005703605 11319.303441129734 11324.694708341247 13234.469855245598 12975.462927733928 12950.652020451975 11865.531690328957 11761.787928832633 11517.978385946804 13270.400410587557 0.9239583345758402 0.8757015385733583 0.8529737680031738 0.8533800305909411 0.9972924286961761 0.9777747864624855 0.9759051437603588 0.894135167229939 0.8863174859025879 0.8679450528679893 1.0 13.695924281655733 -6.748082104545331 24.98743036076846 0.948785625215249 0.8747654431671393 0.31866672385898553 0.04605218579115867 217.7849536178724 407407.23961873463 0.007269389006243975 0.015064007894718819 1.786149866472022e-07 6.748082104545331 -0.07402018204810967 KYS(ph)SCSTIFLDDSTVSQPNLR ddPTM_A549_PD325901_60min_R1 2 KYSSCSTIFLDDSTVSQPNLR 21 1 Q8N7R7-3;Q8N7R7;H7BZD2 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 KYS(0.438)S(0.438)CS(0.101)T(0.024)IFLDDSTVSQPNLR;KYS(0.433)S(0.433)CS(0.114)T(0.02)IFLDDSTVSQPNLR 148.02 3.3855e-22 63901000.0 3980.8 4214.3 5269.2 4420.9 5106.5 4725.0 4451.0 5278.6 4546.8 4544.5 4734.1 True False 4384.927885489927 4569.453851087134 5626.799598273627 4693.968952407626 4747.837056468639 4686.521166568757 4620.385240680655 5173.314182018406 4355.713807922916 4257.559494430776 4151.835711932473 1.0561419549640516 1.1005863835012588 1.3552558407121154 1.1305767564253686 1.14355128330903 1.1287829027289267 1.1128535812247002 1.2460305611684444 1.049105530694409 1.025464346335875 1.0 12.019533642069435 -8.918455183607989 6.748763208198209 1.0213965216649423 1.1596934699873345 0.3823932563349285 0.07669639046503887 0.1575351757791932 10.629658534515562 0.013326256821908798 0.014105913225403131 1.2065485898126786e-09 8.918455183607989 0.13829694832239214 KYSDVEVPASVTGYSFASDGDS(ph)GTCSPLR ddPTM_A549_MK2206_60min_R1 1 KYSDVEVPASVTGYSFASDGDSGTCSPLR 29 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2 P35611 ADD1 Alpha-adducin 1 KYSDVEVPAS(0.003)VT(0.009)GY(0.051)S(0.054)FAS(0.065)DGDS(0.272)GT(0.272)CS(0.272)PLR 43.553999999999995 0.019661 2796000.0 307.5 337.81 355.26 204.22 685.59 273.42 504.48 426.95 833.07 410.27 358.33 True False 359.3984823467994 355.00308609682946 405.64121000458437 254.25390916778414 584.7406191955814 302.35312291849294 596.1374859051095 487.4714699795377 644.3809751394257 317.5897220551101 269.34677159510807 1.3343337297803606 1.3180150034635763 1.5060184594094899 0.9439649402963253 2.170958336469631 1.1225422199342387 2.2132713244517563 1.8098285236264968 2.392384253664205 1.1791109289125714 1.0 8.073320962835005 -6.752529176940799 24.99347936665541 1.714583852680215 1.2950736758441963 0.1675432172479796 0.451580045553999 345.3616856427618 968746.0286330055 0.0791064817717431 0.16276877870768483 1.767953438408893e-07 6.752529176940799 -0.41951017683601877 KYSDVEVPASVTGYSFASDGDSGTCS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 KYSDVEVPASVTGYSFASDGDSGTCSPLR 29 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2 P35611 ADD1 Alpha-adducin 1 KYSDVEVPAS(0.001)VT(0.001)GY(0.001)S(0.005)FAS(0.003)DGDS(0.193)GT(0.193)CS(0.603)PLR;KYSDVEVPASVTGYSFAS(0.001)DGDS(0.163)GT(0.163)CS(0.674)PLR 91.869 9.7837e-10 11441600.0 1542.17 1251.27 1459.69 1388.88 1483.22 1642.6 1397.13 1468.99 1515.27 1835.7199999999998 1698.42 True False 1698.7299631144508 1356.7189142324462 1558.7533412290343 1474.6679632246617 1379.0437440312182 1629.223210202294 1450.2985466888713 1439.6898420496382 1451.5884713933667 1719.8123259140646 1489.525107171447 1.140450708038266 0.9108399097809134 1.046476715111603 0.9900255834055738 0.9258277939671465 1.0937870079250485 0.9736650558666544 0.9665428498775398 0.9745310531555118 1.1546044558993198 1.0 10.540636726266623 KYSS(ph)CSTIFLDDSTVSQPNLK ddPTM_A549_MK2206_60min_R1 1 KYSSCSTIFLDDSTVSQPNLK 21 1 Q8ND76;Q8ND76-3;R4GNF3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 KYS(0.182)S(0.773)CS(0.043)T(0.002)IFLDDSTVSQPNLK 178.46 4.7571e-36 14279000.0 1144.7 1921.8 1877.8 1354.5 1856.2 1594.1 1404.2 1322.8 2467.3 1770.6 1462.8 True False 1337.8973747719729 2019.6114113285184 2144.100276266984 1686.3525608058148 1583.1554388932707 1762.786603922059 1659.324963740791 1510.3109509050994 1908.4604894684799 1370.6202302648942 1099.546388773823 1.2167721056898297 1.83676780893321 1.9499861926316835 1.5336802321604441 1.4398259637401494 1.6031943917235352 1.509099552944932 1.3735763823383087 1.735679830295046 1.2465324285166026 1.0 10.10269275601475 -10.875439829364984 0.8923837143540998 0.9626956751948976 1.5954810343714338 0.3916649322512288 0.2099582307145038 0.4198988687343915 0.5331535049379628 0.1875817300994022 0.03572007720309665 1.3321715992482255e-11 10.875439829364984 0.6327853591765362 KYSS(ph)SLR ddPTM_A549_PD325901_60min_R1 1 KYSSSLR 7 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KYS(0.11)S(0.779)S(0.11)LR 64.04 0.010906 12916000.0 2968.1 3304.5 4207.5 3608.4 4370.5 3230.9 4013.7 4007.5 2864.1 3706.4 5055.3 True False 3269.4193270002647 3582.9818121437575 4493.0462517528795 3831.282672729008 4063.531157406479 3204.588621601481 4166.443549880917 3927.5672686770695 2743.7318371760434 3472.377271461821 4433.530148187028 0.737430268369147 0.8081555086771927 1.013424089061442 0.8641607352767652 0.9165452859428845 0.7228074501561493 0.9397575770595968 0.8858781010620039 0.6188594067185983 0.7832082235601251 1.0 12.114240170609834 KYT(ph)YGK ddPTM_A549_MK2206_60min_R1 1 KYTYGK 6 1 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;A0A0C4DG68;Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2;H0YDK8 Q8TB72-4;Q5T1Z4 PUM2;PUM1 Pumilio homolog 2;Pumilio homolog 1 1 KY(0.001)T(0.998)Y(0.001)GK 64.836 0.035878 2853300.0 2850.4 3195.0 2805.7 2568.0 3758.7 2983.8 2682.2 3202.3 4358.1 4106.3 4104.6 True False 3331.4778344107895 3357.6118530516264 3203.590448994716 3197.1601152818994 3205.8002091197836 3299.5437355138574 3169.5210210408413 3656.235831632449 3370.9973084556304 3178.6839780507944 3085.3145388030066 1.079785478113128 1.0882559333332225 1.0383351223041255 1.0362509478603388 1.03905134105501 1.0694351237180388 1.0272926734628827 1.185044761449489 1.0925943744340112 1.0302625350101295 1.0 11.591201860078765 -10.807576199267677 1.1578258198653484 1.0015998218430437 1.0730359109811525 0.20756091332623106 0.04238794561460487 0.4898789311046768 1.2054604651889016 0.026555523912727974 0.007250756061012963 1.557484741907669e-11 10.807576199267677 0.07143608913810873 KYT(ph)YGK ddPTM_A549_PD325901_60min_R1 2 KYTYGK 6 1 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;A0A0C4DG68;Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2;H0YDK8 Q8TB72-4;Q5T1Z4 PUM2;PUM1 Pumilio homolog 2;Pumilio homolog 1 1 KYT(1)YGK;KYT(1)YGK 76.899 0.027748000000000002 7313500.0 5801.5 6326.4 6420.6 6818.6 7783.9 7154.7 6299.1 6256.7 7183.9 7584.9 8246.400000000001 True False 6390.464009161429 6859.547930502731 6856.340526204284 7239.769435835837 7237.185716997212 7096.434495333226 6538.815697499779 6131.905210213805 6881.985665685192 7105.988119552866 7232.145078236608 0.883619443474936 0.948480410209812 0.9480369174059828 1.001054231838099 1.000696976997291 0.9812350856578126 0.9041322632170037 0.8478681143532768 0.9515829109118488 0.9825560802059432 1.0 12.820207903448532 -10.158903516430497 1.1424499085676716 0.9941192964832309 0.9435684492140604 0.1496038983228799 0.04540051475112922 0.6142888066062658 1.601246941692904 0.0175278022360861 0.008929174427328724 6.935798757366811e-11 10.158903516430497 -0.050550847269170585 KYTELPHGAISEDQAVGPADIPCDS(ph)TGQTST ddPTM_A549_PD325901_60min_R1 1 KYTELPHGAISEDQAVGPADIPCDSTGQTST 31 1 Q9H773;H3BPN2;H3BSA6 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 KYTELPHGAISEDQAVGPADIPCDS(0.21)T(0.21)GQT(0.194)S(0.194)T(0.194) 76.859 5.7007e-06 6138100.0 398.16 503.14 377.7 439.34 685.61 663.05 358.37 559.11 535.45 378.5 603.45 True False 438.58091009009985 545.5413735699834 403.33299329460806 466.47703398646564 637.4551188260973 657.6503406335269 372.0079664575887 547.9581124366898 512.9468985775329 354.6014454047861 529.229475584726 0.8287159546537504 1.0308219756037493 0.7621136234881484 0.8814267827223201 1.2044966280870824 1.2426562974537907 0.7029237478630058 1.0353884991595967 0.9692334275425551 0.670033438732792 1.0 9.0477496049357 -6.585666357933496 24.999980826139694 1.001286893866851 0.878266014463017 0.05606902791670454 0.17573604063473833 95.58245423643538 38057.133791319626 0.019961129540326285 0.04155240865156213 2.596173078250469e-07 6.585666357933496 -0.1230208794038341 KYTELPHGAISEDQAVGPADIPCDSTGQT(ph)ST ddPTM_A549_PD325901_60min_R1 1 KYTELPHGAISEDQAVGPADIPCDSTGQTST 31 1 Q9H773;H3BPN2;H3BSA6 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 KYTELPHGAISEDQAVGPADIPCDS(0.168)T(0.168)GQT(0.233)S(0.215)T(0.215) 69.523 0.00025025 6682600.0 199.08 508.66 393.04 682.39 437.87 491.68 550.04 742.91 171.21 462.09 722.66 True False 219.29045504504992 551.526563342425 419.7140579415216 724.5396804798656 407.1155217694943 487.67592109598473 570.9720731934368 728.0920772483792 164.01463909881292 432.91355853922727 633.7774013191777 0.3460054817174093 0.8702212514905842 0.6622420696413388 1.1432084497992048 0.6423635821064345 0.7694750871219301 0.9009031751605303 1.1488135672444142 0.2587890302769146 0.6830687835163232 1.0 9.307832408052759 -5.248232028853508 22.667138180897282 0.7396389012728637 0.3460045349119172 0.1755749505755908 0.250798343260681 993.7683487235454 1705440.807062243 0.04254475265183197 0.9836196632952893 5.646352287068099e-06 5.248232028853508 -0.3936343663609465 KYTLENKEEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_A549_MK2206_60min_R1 2 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KYTLENKEEGS(0.022)LS(0.941)DT(0.037)EADAVSGQLPDPTTNPSAGK;KYTLENKEEGS(0.04)LS(0.921)DT(0.04)EADAVSGQLPDPTTNPSAGK 333.41 3.972899999999998e-263 396360000.0 11512.1 13620.7 12708.1 12482.3 17352.6 13116.0 14040.2 12183.0 18362.6 19565.2 16911.3 True False 13455.061036177529 14313.93545128648 14510.299670267581 15540.464060351731 14800.055526850221 14503.92641430384 16591.1226007075 13909.977558872713 14203.50041904668 15145.407731378464 12711.75748186407 1.0584737047866069 1.126039060429547 1.1414865089244741 1.2225267892754712 1.1642808280417194 1.1409851419047812 1.3051792896755732 1.0942607722589226 1.117351431484662 1.1914487633190372 1.0 13.633875885508875 -9.894617079747686 0.7039178846924304 1.007677619255744 1.1607631461938825 0.0 0.08206765497400587 0.41753987965812644 0.4252180721631757 0.03020305981716373 0.013668268916778603 1.274626432076287e-10 9.894617079747686 0.1530855269381386 KYTLENKEEGSLS(ph)DTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVR ddPTM_A549_PD325901_60min_R1 1 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVR 47 3 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KYT(0.061)LENKEEGS(0.212)LS(0.514)DT(0.212)EADAVSGQLPDPTTNPSAGKDGPSLLVVEQVR 68.929 8.358999999999999e-06 31536000.0 555.92 507.91 355.61 383.81 764.77 661.49 815.08 475.07 665.14 369.36 718.71 True False 612.3565891533264 550.7133582102999 379.7438330566469 407.517072004246 711.0551935132719 656.1030447563109 846.0983154288901 465.594356164795 637.1864788866562 346.0385465646281 630.3132262780646 0.9715115653993645 0.8737137906215394 0.6024684509620647 0.6465310499838197 1.1280981643237609 1.0409158770640632 1.3423458054735968 0.7386714045556084 1.0109045032248134 0.5489945825949909 1.0 9.29992512584584 -6.76342712980282 24.999886062788516 1.020544383885444 0.7684897691568475 0.14233723762119166 0.21586878090850542 44.04610152052132 553978.030067697 0.022778746942355165 0.044630803099810476 1.7241413601433578e-07 6.76342712980282 -0.25205461472859647 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK ddPTM_A549_MK2206_60min_R1 2 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 0 ; 90.944 2.211e-09 5249400.0 796.74 811.4300000000001 919.88 794.63 1021.66 782.81 914.4300000000001 744.1500000000001 1174.16 1076.2 1166.65 False True 931.2102335772001 852.7283211022472 1050.3328161318946 989.3143856722967 871.3751673848178 865.6464346127765 1080.5700944263579 849.635541363797 908.2146347482307 833.085672546639 876.938607098018 1.0618876008421831 0.9723922680563831 1.1977267366613906 1.128145548234163 0.9936558389969729 0.9871231892474095 1.2322072328440425 0.9688654764276227 1.0356650139440342 0.9499931532305346 1.0 9.776332035482909 KYVDAETS(ph)L ddPTM_A549_PD325901_60min_R1 2 KYVDAETSL 9 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-8;Q9Y6M7-5;H7C3C4;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 KYVDAET(0.043)S(0.957)L;KYVDAET(0.015)S(0.985)L 85.53299999999999 0.0010173 20129900.0 8161.299999999999 8824.5 8893.4 9208.3 10499.7 9690.900000000001 9688.8 9950.8 8989.1 9282.9 10927.6 True False 8989.82916796848 9568.171584585447 9496.959604358666 9777.075777433363 9762.237293998589 9611.980523407654 10057.512585914794 9752.323487748417 8611.3193874373 8696.776109770371 9583.574475763777 0.9380455268233332 0.9983927822320072 0.9909621538785811 1.0201909321160845 1.0186426075872461 1.0029640347362787 1.0494531671193847 1.0176081494865403 0.8985498478897153 0.9074668467140252 1.0 13.226348136514346 -8.725193134419248 24.999388793794836 0.9520929427682706 1.0063128088930549 0.3985192817769685 0.03625259374586632 179.0815881583911 123514.26357828802 0.0073349143298266865 0.008316875694249493 1.8828116010845613e-09 8.725193134419248 0.054219866124784244 KYVIS(ph)DEEEEDDD ddPTM_A549_MK2206_60min_R1 2 KYVISDEEEEDDD 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD 95.508 0.00013606 188019000.0 6174.6 6564.5 6726.6 6292.200000000001 8706.099999999999 5917.5 6898.6 6329.4 10097.0 9252.4 10440.5 True False 7216.721525523739 6898.605010753489 7680.533027126156 7833.789282467594 7425.444222900927 6543.685922281409 8151.986323075225 7226.611832974552 7810.045621595761 7162.276413929127 7847.835706858837 0.9195811170226821 0.879045544330682 0.9786816791301504 0.9982101531025979 0.9461773284080415 0.8338204527602905 1.0387559866920466 0.9208413762610566 0.9951846487777455 0.9126435212793068 1.0 12.938079123953562 -8.565224021202196 1.064364234741243 0.9993733437717855 0.9354406573359588 0.0 0.059110722673436054 0.527926028125656 1.169853038453652 0.010713065014114032 0.012330898740754454 2.7212972249961437e-09 8.565224021202196 -0.06393268643582672 KYVIS(ph)DEEEEDDD ddPTM_A549_PD325901_60min_R1 3 KYVISDEEEEDDD 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD 174.02 6.1237000000000005e-22 351702000.0 32259.5 32998.5 33447.2 33678.1 35296.7 38787.1 36088.0 35555.2 39505.1 39193.2 40705.6 True False 35534.460691811284 35779.399403245814 35717.12812635268 35758.31974848544 32817.581559004524 38471.230717422026 37461.34858811134 34846.02364348519 37844.83802968586 36718.53466324662 35699.06925405849 0.9953889956884941 1.0022502029006874 1.0005058639530815 1.0016597209861489 0.9192839545886372 1.0776536061384394 1.0493648537868392 0.9761045419839252 1.060107135016788 1.028557198562599 1.0 15.123598840356808 -7.278398626690492 24.972010131650745 1.0295159733871533 0.9867601033895752 0.3304298759597981 0.03391205455292858 876.7843890603114 1291037.8683394364 0.005421998266332367 0.008680039430290828 5.2674615398594534e-08 7.278398626690492 -0.04275586999757808 LAAAEET(ph)AVSPRKS(ph)PR ddPTM_A549_MK2206_60min_R1 1 LAAAEETAVSPRKSPR 16 2 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 2 LAAAEET(0.648)AVS(0.361)PRKS(0.99)PR 79.293 0.00016636 19332000.0 1113.0 1400.3 1202.9 1020.8 1398.8 1216.3 1222.9 1094.4 2026.6 1501.1 1512.0 True False 1300.8471897625632 1471.5692888351139 1373.489307871741 1270.8960458254537 1193.0383729791556 1345.008058685404 1445.0851005260042 1249.5345514594355 1567.5783358151903 1162.0004674407726 1136.5286709229015 1.1445792992676809 1.2947929308638977 1.2084950806884784 1.1182261198861276 1.0497213167621775 1.1834352208582735 1.2714902294128172 1.099430734505597 1.3792686237666676 1.0224119260424702 1.0 10.150418363781817 -11.149379026401972 1.5416147241619864 1.0004220039501999 1.2174205998616552 0.34812231810804295 0.09234884198778197 0.34921751521861044 1.492655652003227 0.07618636133660112 0.016398614411674443 7.089587608324533e-12 11.149379026401972 0.21699859591145532 LAAAEETAVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LAAAEETAVSPR 12 0 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 LAAAEETAVS(1)PR;LAAAEETAVS(1)PR 186.76 2.4671e-19 342390000.0 9019.4 8577.2 8769.8 7526.700000000001 11632.3 8693.599999999999 8417.9 9345.7 13414.400000000001 11378.599999999999 12553.400000000001 True False 10541.654216841383 9013.742843816714 10013.4895104943 9370.7418378864 9921.204079214627 9613.550981655368 9947.323466937483 10670.481595005893 10376.059818394995 8808.166357219094 9436.044323785425 1.1171687897087395 0.9552459202735815 1.0611956840064125 0.9930794638454149 1.0514155867418151 1.0188115540558136 1.0541836309377306 1.1308214786686432 1.0996196565376526 0.9334596208939333 1.0 13.203966480004537 -7.816635608029543 8.845925214481273 1.056372784580246 1.0296365217095285 0.0 0.06166044566010005 0.8125391756645375 120.82253319394029 0.008616984731206971 0.011932032369546024 1.5253320369953426e-08 7.816635608029543 -0.02673626287071751 LAAAEETAVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LAAAEETAVSPR 12 0 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 LAAAEETAVS(1)PR;LAAAEETAVS(1)PR 136.38 2.9971000000000004e-08 464950000.0 24875.1 27782.0 24790.0 30743.0 31237.0 34843.0 28157.0 32644.0 28697.0 25863.7 29668.0 True False 27400.401839919243 30123.286640937487 26472.398474380014 32641.925287581194 29043.02088179984 34559.25016015985 29228.530043101597 31992.889811277408 27490.964886505666 24230.661568073356 26019.024080947293 1.0530910673157599 1.15774083406132 1.0174247270774737 1.25454072320428 1.1162225297707034 1.3282300693770535 1.1233522807069654 1.2295960721564705 1.0565717146415272 0.9312671179629876 1.0 14.66727923015312 -8.924131686843639 5.309788080371474 1.0242977034835483 1.1611562341146693 0.3978429303378169 0.08869819158100307 0.1605439177694465 7.760624388640971 0.01425820736464631 0.014997533288465214 1.1908808541887318e-09 8.924131686843639 0.13685853063112097 LAAAEETAVS(ph)PRKS(ph)PR ddPTM_A549_PD325901_60min_R1 3 LAAAEETAVSPRKSPR 16 2 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 2 LAAAEET(0.002)AVS(0.998)PRKS(1)PR;LAAAEET(0.398)AVS(0.754)PRKS(0.848)PR;LAAAEET(0.065)AVS(0.936)PRKS(0.999)PR 93.26899999999999 2.8960000000000003e-06 79528000.0 8885.1 9936.9 8588.1 9869.1 10391.0 9097.57 8305.0 9591.1 8970.4 10608.4 11045.7 True False 9787.108811135087 10774.317436553578 9170.94011044062 10478.69189264767 9661.17200700394 9023.482406209721 8621.051319670378 9399.797986427602 8593.405283406293 9938.583813559133 9687.14892446135 1.0103188138690968 1.1122279135553477 0.9467119977151138 1.0817106224296364 0.9973184145655266 0.9314900056325364 0.8899472266706944 0.9703368926941809 0.8870933388570906 1.0259555098263098 1.0 13.241856405640426 -7.065391827630809 4.180933219896132 0.9419756850741978 1.0371208418841498 0.34414798091247023 0.05534296508933756 0.1771939181043392 6.088611496155609 0.008102165974936376 0.014636368152686461 8.602172997646843e-08 7.065391827630809 0.09514515680995195 LAAAEETAVS(ph)PRKS(ph)PRPAGPQLFLPDPDPQR ddPTM_A549_MK2206_60min_R1 2 LAAAEETAVSPRKSPRPAGPQLFLPDPDPQR 31 3 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 2 LAAAEET(0.547)AVS(0.578)PRKS(0.875)PRPAGPQLFLPDPDPQR;LAAAEET(0.519)AVS(0.567)PRKS(0.914)PRPAGPQLFLPDPDPQR 59.678000000000004 0.00047087 31527000.0 3229.8999999999996 3561.6 3224.6 2898.6000000000004 5372.6 3746.2 2936.4 3238.8 5306.6 4989.7 4608.7 True False 3775.0281565265927 3742.8702271764223 3681.896767946808 3608.757130123099 4582.297657040183 4142.620397473695 3469.9058706227456 3697.90981840901 4104.663572898891 3862.5233045028463 3464.2325963507806 1.0897155579285305 1.0804327143388577 1.0628318582953449 1.0417190617987258 1.322745378548534 1.1958262854051798 1.001637671292032 1.0674542530153388 1.184869508249169 1.1149722765646928 1.0 11.758320083761435 LAAAEETAVS(ph)PRKS(ph)PRPAGPQLFLPDPDPQR ddPTM_A549_PD325901_60min_R1 2 LAAAEETAVSPRKSPRPAGPQLFLPDPDPQR 31 3 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 2 LAAAEET(0.522)AVS(0.554)PRKS(0.925)PRPAGPQLFLPDPDPQR;LAAAEET(0.502)AVS(0.56)PRKS(0.938)PRPAGPQLFLPDPDPQR 81.732 2.1171e-06 45543000.0 2688.11 2536.07 2862.9300000000003 2689.81 2693.41 2688.75 2284.15 3601.5 3347.9 3528.92 3210.6 True False 2961.0049483180096 2749.793519238439 3057.225645996644 2855.9534546982645 2504.234173360071 2666.853711452222 2371.0745781848386 3529.6652571779073 3207.1994056358626 3306.103388950746 2815.716553670262 1.0515990838844789 0.9765874749196992 1.0857718054083167 1.0142901106205289 0.8893772244567102 0.947131453262226 0.8420856762354733 1.2535584423712747 1.1390348937840729 1.1741605825491452 1.0 11.45928639591143 -8.247925400365187 24.97961165429612 1.081582590690705 0.9743725701926174 0.3846265264181642 0.09221567455655372 934.9721503174951 1728229.5206328589 0.015757739810933803 0.020288728152225433 5.650340235052163e-09 8.247925400365187 -0.1072100204980877 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK ddPTM_A549_PD325901_60min_R1 1 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK 37 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 257.97 9.304599999999998e-162 74428000.0 1058.4 1469.7 1274.6 1761.1 1574.5 1421.5 1297.2 1558.6 1676.4 1353.8 1617.1 False True 1165.8479888471006 1593.5567769125994 1361.1020207924466 1869.8791472517062 1463.912551730123 1409.9237752968227 1346.565655855077 1527.5125003019537 1605.9467378380346 1268.320836959047 1418.2069516414945 0.8220577310650589 1.1236419163424263 0.9597344162056517 1.3184811603746736 1.0322277366048211 0.9941594022402129 0.9494845969387636 1.0770730594247506 1.1323782724229647 0.894312945999198 1.0 10.469852357663758 LAADVGK ddPTM_A549_PD325901_60min_R1 2 LAADVGK 7 0 P05141;P12236;P12235;V9GYG0 P05141;P12236 SLC25A5;SLC25A6;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 0 ; 105.39 0.027213 37613000.0 10257.7 10425.7 11336.6 9930.3 13157.8 12573.6 12325.1 12269.5 11997.900000000001 11743.3 12968.6 False True 11299.054152680379 11304.310327997327 12105.969848513776 10543.672077652389 12233.641519945772 12471.204770363787 12794.138425053505 12024.77519726346 11493.669986821149 11001.826033875885 11373.544414728765 0.993450567445631 0.9939127079293083 1.0643972896291254 0.9270348532686354 1.07562260926358 1.0965099634387983 1.124903368600299 1.0572583847908792 1.0105618413848916 0.9673172788272137 1.0 13.473394300682903 -3.9928881521696087 12.824258030546831 1.02248561110224 0.6207742388097666 0.0 0.05738220547277498 0.0 0.0 0.0074717533071981266 0.0 0.00010165104503970975 3.9928881521696087 -0.40171137229247345 LAAEQELIR ddPTM_A549_MK2206_60min_R1 1 LAAEQELIR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 58.981 0.015864 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LAAEQELIR ddPTM_A549_PD325901_60min_R1 1 LAAEQELIR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 74.464 0.0059567 1928400.0 922.05 898.01 763.36 717.95 1182.3 929.46 779.24 980.88 919.86 1005.2 1181.7 False True 1015.6558372226656 973.6884542663696 815.1662000565846 762.2961409172467 1099.2593267135755 921.8907859214809 808.8944046164896 961.3155789145255 881.2014830993174 941.7315004514949 1036.3583914134895 0.9800237501212417 0.9395287019757284 0.7865678580020751 0.7355526304732775 1.0606941921069366 0.8895482427310825 0.7805160949324088 0.9275899021798695 0.850286436044047 0.9086928887284514 1.0 10.017307283924112 -10.83785274280006 0.976991259523463 1.003212787310031 0.8794990559658535 0.04694730984366935 0.09365644808641076 0.7873743413201492 1.2759616686090665 0.07059845955329877 0.015600306629118682 1.4526040718011484e-11 10.83785274280006 -0.1237137313441774 LAAGHELQPLAIVDQRPS(ph)SR ddPTM_A549_MK2206_60min_R1 4 LAAGHELQPLAIVDQRPSSR 20 1 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 LAAGHELQPLAIVDQRPS(0.5)S(0.5)R;LAAGHELQPLAIVDQRPS(0.5)S(0.5)R;LAAGHELQPLAIVDQRPS(0.5)S(0.5)R;LAAGHELQPLAIVDQRPS(0.569)S(0.431)R 91.583 9.5715e-07 76710000.0 3871.21 4325.88 3798.919 4172.24 5964.87 4887.48 4579.700000000001 4498.780000000001 6813.52 6397.4 6671.68 True False 4524.575606002454 4546.048814672602 4337.662838116887 5194.438987298973 5087.445524615509 5404.6698895533455 5411.77220940301 5136.495841935926 5270.268598955649 4952.222896812735 5014.917726999281 0.9022232970329851 0.9065051636236453 0.8649519442290761 1.0357974487464046 1.014462410265627 1.0777185556715556 1.079134794229454 1.0242432920249307 1.0509182574584648 0.9874983332530044 1.0 12.29201031733927 -6.267560132676085 24.930532942484362 1.0322528091088743 0.8927546356303926 0.8294899426064797 0.028764877308642692 139.0743778775133 566466.8508121283 0.004237002322617645 0.010087235548024537 5.400573329233141e-07 6.267560132676085 -0.1394981734784817 LAAGHELQPLAIVDQRPS(ph)SR ddPTM_A549_PD325901_60min_R1 4 LAAGHELQPLAIVDQRPSSR 20 1 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 LAAGHELQPLAIVDQRPS(0.565)S(0.435)R;LAAGHELQPLAIVDQRPS(0.5)S(0.5)R;LAAGHELQPLAIVDQRPS(0.589)S(0.411)R;LAAGHELQPLAIVDQRPS(0.642)S(0.358)R 154.42 5.0369999999999994e-27 113220000.0 4919.76 5527.969999999999 5505.46 5143.7 6381.63 5914.45 5997.97 6212.27 6452.93 5583.42 7503.86 True False 5419.210413464111 5993.8314323124 5879.093622620421 5461.4146668097255 5933.406324228329 5866.284680129649 6226.2260305651225 6088.3614014184595 6181.73579276855 5230.881908327583 6580.932790887729 0.8234714721547994 0.9107875164158706 0.8933526309159231 0.8298845832876243 0.9016056709231257 0.8914062590416337 0.9461008383471488 0.9251517368250125 0.9393403624069939 0.7948541756224147 1.0 12.684076372788311 -8.627488852941033 0.18612444918818907 1.0392875257219911 0.82103658131015 0.0 0.06662233678403824 0.9935048541611813 0.1605306709284776 0.07835602156668567 0.0784222997553354 2.35782271354234e-09 8.627488852941033 -0.21825094441184112 LAAGRPFNT(ph)YPR ddPTM_A549_MK2206_60min_R1 5 LAAGRPFNTYPR 12 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 LAAGRPFNT(1)YPR;LAAGRPFNT(0.997)Y(0.003)PR;LAAGRPFNT(1)YPR;LAAGRPFNT(1)YPR;LAAGRPFNT(0.999)Y(0.001)PR 131.53 2.5608e-08 354217500.0 11555.699999999999 12105.7 12374.9 11646.2 16451.8 11703.4 10303.500000000002 11665.199999999999 17375.0 16420.7 18709.6 True False 13506.019650259883 12721.828422374669 14129.846899976717 14499.519522817785 14031.762013567677 12941.846019911824 12175.512579335746 13318.77782317672 13439.590242173552 12711.252465328564 14063.489961308944 0.960360457284589 0.9045996731518695 1.0047183834773825 1.0310043639742648 0.9977439492026122 0.9202442676403259 0.8657532812148802 0.9470464201858108 0.9556369207890896 0.9038476580350527 1.0 13.779667034065957 -10.40894784282345 0.9760572429577372 0.9975712644615583 0.9545108946009935 0.0 0.0526552702972026 0.9251773479631535 1.6947816984613437 0.0241313642686526 0.008911788092791074 3.8998882009307516e-11 10.40894784282345 -0.04306036986056483 LAAGRPFNT(ph)YPR ddPTM_A549_PD325901_60min_R1 4 LAAGRPFNTYPR 12 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 LAAGRPFNT(1)YPR;LAAGRPFNT(0.998)Y(0.002)PR;LAAGRPFNT(1)YPR;LAAGRPFNT(1)YPR 131.53 2.5608e-08 568708200.0 11922.7 12941.3 12883.5 12886.5 14798.099999999999 14605.200000000003 13566.300000000001 15275.1 14412.199999999999 13889.6 14771.3 True False 13133.083726972161 14031.908768496303 13757.851784779137 13682.46983763506 13758.732506673576 14486.260093538638 14082.572970264213 14970.42614741587 13806.505353775545 13012.608285586035 12954.523742985599 1.0137836008122836 1.0831667027584915 1.0620113913665497 1.0561924242906744 1.0620793770302384 1.1182394954027097 1.0870776301513525 1.1556137797440689 1.0657671117590304 1.0044837265925648 1.0 13.661168357146748 -10.124926148941155 0.9984560288539747 1.006812011967514 1.079159378401646 0.4091321220861952 0.03473760404986763 0.3555987580960893 0.7086157082409824 0.013965775208524088 0.006726194868743915 7.500217384460769e-11 10.124926148941155 0.07234736643413209 LAAIAESGVER ddPTM_A549_PD325901_60min_R1 1 LAAIAESGVER 11 0 P28072 P28072 PSMB6 Proteasome subunit beta type-6 0 100.02 0.00075257 2698400.0 1701.1 1986.8 1689.7 2380.7 2524.1 2232.8 1987.1 2204.5 1875.1 2271.2 2222.5 False True 1873.7944197163683 2154.234608675206 1804.3732029915247 2527.750432038009 2346.81592367228 2214.6168170824812 2062.720177882844 2160.5295181032066 1796.2960678358986 2127.796044394583 1949.146589588289 0.9613409426082021 1.1052193920059326 0.9257247313413486 1.2968498344559791 1.2040222814477946 1.136198184842663 1.0582683667309725 1.1084489640974449 0.9215807971709934 1.0916552176016836 1.0 10.928626880193407 -8.752074197143504 24.77422156000898 0.9629687101133364 1.1038167150755995 0.10568368746482704 0.10536093035373995 162.7800804588047 430610.2625888116 0.016880441584993303 0.019012267792383613 1.769806569465258e-09 8.752074197143504 0.14084800496226313 LAAIVAK ddPTM_A549_MK2206_60min_R1 2 LAAIVAK 7 0 P40429;M0QYS1;M0QZU1;A0A096LPE0 P40429 RPL13A 60S ribosomal protein L13a 0 ; 123.34 0.01736 6522900.0 4160.5 4521.5 4701.6 3631.2 6510.0 4909.8 5200.8 4605.8 6892.799999999999 5646.6 5703.7 False True 4862.690685541009 4751.625037112025 5368.357577429356 4520.84416301076 5552.387623744855 5429.351777138528 6145.71803975439 5258.686254670934 5331.591805539794 4371.0291382659825 4287.313875888197 1.1342044987395778 1.108298849737853 1.252149418688689 1.054470070044541 1.2950737418530092 1.2663760886911357 1.433465852434513 1.226568990958587 1.2435739392734002 1.0195262732800132 1.0 12.065858325938999 -10.621508456592178 0.9104673404040939 1.0007338848853924 1.225425298651097 0.4185193667501613 0.09679734693485566 0.4592724352769422 0.6819211075401881 0.06681201740345782 0.01833798283191363 2.3905153867206372e-11 10.621508456592178 0.22469141376570456 LAAIVAK ddPTM_A549_PD325901_60min_R1 2 LAAIVAK 7 0 P40429;M0QYS1;M0QZU1;A0A096LPE0 P40429 RPL13A 60S ribosomal protein L13a 0 ; 126.05 0.016421 12314700.0 9497.4 9854.5 10234.099999999999 9620.0 10787.9 9809.8 10375.099999999999 9748.4 10589.7 11043.2 10614.3 False True 10461.56905638365 10684.97329937076 10928.6475686427 10214.205551394816 10030.195120234606 9729.912241228818 10769.930107972563 9553.960514528142 10144.651735673735 10345.930467355702 9308.808389591437 1.1238354705078217 1.1478347015196995 1.1740114428461619 1.097262412535609 1.077495067086114 1.0452371382043093 1.1569611981717087 1.0263355001710874 1.089790584476622 1.1114129794447067 1.0 13.184380786446756 -14.999999997956607 0.056100826207937264 0.5837754582419719 1.2953897402196148 0.15982737249755052 0.048286794053948444 153.69003344408543 0.6543598545792748 9.15635304197005 1.8107869926926925 1.0000000047050862e-15 14.999999997956607 0.711614281977643 LAAKQS(ph)SG ddPTM_A549_PD325901_60min_R1 1 LAAKQSSG 8 1 P62701;Q8TD47 P62701 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 1 LAAKQS(0.853)S(0.147)G 52.49 0.022442 8221800.0 1643.1 1647.7 1810.6 1625.9 1690.3 1913.2 1058.9 2080.5 1561.3 1690.2 2076.4 True False 1809.90630241371 1786.5574616036529 1933.4782040222851 1726.3281503131843 1571.5791592184357 1897.6195335194377 1099.1970189523136 2039.002795379324 1495.6839905670035 1583.4804835486636 1821.0159633840815 0.9938991962762775 0.9810773203127815 1.0617579652784646 0.9480027550692448 0.8630232742704214 1.0420663913308041 0.6036174536930599 1.1197061620427242 0.8213458973679187 0.8695588151824907 1.0 10.83052785398074 -6.511814105408498 20.264696540087133 0.911960761495899 1.0084202766645087 0.12108183105783821 0.12760713636634177 75.93683107333686 139072.19257845613 0.01724286918870893 0.03796893243666512 3.077413783259902e-07 6.511814105408498 0.09645951516860973 LAAKQSS(ph)G ddPTM_A549_PD325901_60min_R1 1 LAAKQSSG 8 1 P62701;Q8TD47 P62701 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 1 LAAKQS(0.125)S(0.875)G 46.001000000000005 0.036627 7948700.0 2076.8 2392.3 2539.2 2264.7 2839.0 2917.6 1874.0 1960.1 2210.4 2545.6 2943.2 True False 2287.6352071406473 2593.907516777582 2711.5253814500074 2404.585375493124 2639.5984340183027 2893.8400329271963 1945.3160954921475 1921.0042678312964 2117.5045748730568 2384.870381565186 2581.2050584820017 0.8862663582745333 1.0049211348993135 1.0504881712283047 0.9315747184019749 1.0226225248336689 1.121119774431658 0.7536464757419086 0.7442276860254693 0.8203550384014644 0.9239368153755753 1.0 11.333829042561886 -7.757100740297535 24.999808349414575 0.8864600222824143 1.002753825904114 0.38614924038576937 0.09138309421875762 136.50018604820002 786527.0547460336 0.016912522579038275 0.024602564713097408 1.7494408358226058e-08 7.757100740297535 0.11629380362169972 LAAKS(ph)PIR ddPTM_A549_MK2206_60min_R1 1 LAAKSPIR 8 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 LAAKS(1)PIR 42.336000000000006 0.022352 1890800.0 1774.4 1822.5 1680.7 1668.4 2283.4 2089.1 2043.0 1914.9 2705.9 2449.2 2494.6 True False 2073.875340085077 1915.2574654731113 1919.0485324964961 2077.158074897322 1947.5148848016886 2310.1671753676524 2414.1866549796605 2186.342939135301 2093.0179704343846 1895.9240189567258 1875.1219725425071 1.1059949008400114 1.0214042038429019 1.023425974735088 1.1077455788547297 1.0386070417387423 1.2320090155176735 1.2874824626508041 1.1659737185900523 1.1162036395938708 1.0110937030864253 1.0 10.87276872744867 -4.849540049067835 18.49565202209451 1.0864280701782676 12.990720530199868 0.0 0.09190632988289962 3719.117313416546 460965.26659084705 0.013762810015536704 15572.66740744634 1.4140343219219167e-05 4.849540049067835 11.9042924600216 LAAKS(ph)PIR ddPTM_A549_PD325901_60min_R1 1 LAAKSPIR 8 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 LAAKS(1)PIR 41.398999999999994 0.060095 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LAALALASSENS(ph)SSTPEECEEMSEKPK ddPTM_A549_MK2206_60min_R1 1 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALASS(0.001)ENS(0.249)S(0.249)S(0.249)T(0.249)PEECEEMS(0.002)EKPK 65.425 0.00012182 4269900.0 529.48 529.25 549.01 443.76 611.34 398.75 501.42 377.76 804.98 491.54 866.34 True False 618.8432794568564 556.1865643904764 626.8678734015003 552.4812199211431 521.412695837201 440.94546033117183 592.5215235143911 431.3086368414805 622.6533152889137 380.5007726106441 651.2038682323723 0.9503065163550771 0.8540897736068263 0.9626292225552505 0.8483997821155425 0.8006904155107732 0.6771235274263252 0.9098863695676923 0.6623250534617133 0.9561572737260358 0.5843036123901957 1.0 9.346965459193205 -8.971824430011232 24.842879830871052 0.9806577412610771 0.8333641352556037 0.0 0.15048408065753283 135.28869466870825 119287.41593360258 0.01568732119827136 0.016438251152126094 1.0670273957080743e-09 8.971824430011232 -0.14729360600547337 LAALALASSENSS(ph)STPEECEEMSEKPK ddPTM_A549_MK2206_60min_R1 3 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALAS(0.002)S(0.01)ENS(0.055)S(0.31)S(0.31)T(0.31)PEECEEMS(0.002)EKPK;LAALALAS(0.041)S(0.154)ENS(0.067)S(0.246)S(0.246)T(0.246)PEECEEMSEKPK;LAALALAS(0.009)S(0.043)ENS(0.153)S(0.66)S(0.116)T(0.018)PEECEEMSEKPK 103.84 6.4929e-13 22670300.0 3789.14 4084.3 4341.4 3308.8900000000003 3926.0099999999998 4168.5599999999995 3970.82 3586.3500000000004 5305.3 4969.889999999999 5080.67 True False 4428.654196421307 4292.173424544209 4957.075801142549 4119.568198541717 3348.4991297540005 4609.674252333822 4692.266594873391 4094.7260952362435 4103.658020823214 3847.188397261489 3818.9994196414436 1.1596373054272686 1.123899993927517 1.298003811063149 1.0787035413921306 0.8768001148500784 1.2070371701618674 1.2286638669649068 1.0721986691531593 1.0745374821786426 1.0073812468980925 1.0 11.898978985381751 -14.999996381416045 0.07377471685898224 0.5376436565109567 1.2749277775658852 0.19485396006435696 0.1017879489419696 218.87782149674098 1.2029820302482892 16.683972904827172 2.0293530910860955 1.0000083321321849e-15 14.999996381416045 0.7372841210549285 LAALALASSENSS(ph)STPEECEEMSEKPK ddPTM_A549_PD325901_60min_R1 1 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALAS(0.002)S(0.014)ENS(0.035)S(0.311)S(0.311)T(0.311)PEECEEMS(0.015)EKPK 76.417 1.4838999999999999e-06 18112000.0 899.19 836.31 1378.2 1002.1 1177.8 1182.6 1374.1 1303.5 1069.6 1174.2 1271.3 True False 990.4751068513086 906.7887787302004 1471.7329397898557 1063.9974410657746 1095.0753911894187 1172.969297689781 1426.392127436372 1277.500669924032 1024.6484316341935 1100.0608116097746 1114.9381594346862 0.8883677524801152 0.8133085867201594 1.32001306739387 0.9543107230317237 0.9821848700062983 1.052048750654044 1.2793464062254396 1.1458040601747552 0.9190181742041434 0.986656347081658 1.0 10.122747977273056 -8.779857251242275 24.97152011104386 0.9617585834650962 1.0569121867439217 0.06351668152890311 0.1459746944344818 479.7312178819517 650432.0700524956 0.025695663443279067 0.027379406837816755 1.6601324886448603e-09 8.779857251242275 0.0951536032788255 LAALALASSENSSS(ph)TPEECEEMSEKPK ddPTM_A549_PD325901_60min_R1 2 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALASS(0.001)ENS(0.004)S(0.02)S(0.869)T(0.107)PEECEEMSEKPK;LAALALAS(0.001)S(0.005)ENS(0.003)S(0.088)S(0.715)T(0.188)PEECEEMSEKPK 128.12 1.4199e-24 20648900.0 2761.8 2645.1000000000004 2764.2 2622.5 3005.3 2718.7 3071.4 3179.1000000000004 1981.36 2949.2 2578.5 True False 3042.1759028702986 2868.0118599792577 2951.7952344849214 2784.4858688703653 2794.2180957221585 2696.559808582111 3188.2838077345677 3115.690356544296 1898.0903295650016 2762.9870086863793 2261.360846458225 1.3452854760596908 1.2682681158432447 1.3053180960075719 1.2313319536028344 1.2356356572187506 1.1924500297267908 1.4098960865657963 1.3777944203040986 0.8393575631849368 1.2218249082245358 1.0 11.142975506675493 -8.761595445803692 24.999999988749888 0.9241410594024574 1.2913613287943728 0.4897896266423861 0.11410044283137064 1.258647636389433 201608.5401902739 0.014458524761366989 0.015875128730930887 1.7314284692889259e-09 8.761595445803692 0.36722026939191543 LAALALASSENSSST(ph)PEECEEMSEKPK ddPTM_A549_PD325901_60min_R1 1 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALASSENS(0.002)S(0.074)S(0.383)T(0.541)PEECEEMSEKPK 110.14 2.3718e-13 19942000.0 1112.4 1519.3 1917.4 1528.7 1708.1 1591.4 1803.0 2107.7 1203.1 1499.4 1394.5 True False 1225.3300290944023 1647.3367429838142 2047.5262942628583 1623.1243270704013 1588.1289486251028 1578.440166026988 1871.614151639458 2065.660270041336 1152.5378908929488 1404.7276281107945 1222.9853404638327 1.0019171845753116 1.346979958368954 1.6742034646844646 1.3271821610345802 1.2985674448254505 1.2906452054677486 1.530365156241059 1.6890310960374293 0.9423971430890857 1.1486054506409977 1.0 10.256191395504587 -8.786238140862087 24.96278108530162 0.9727985586218715 1.3981539614387977 0.4135047270964872 0.18997607839897235 123.07357634545009 123887.00891634716 0.03151426656226772 0.03355648527524969 1.6359192361436987e-09 8.786238140862087 0.4253554028169262 LAALRDEPSKVQT(ph)LNEQDWER ddPTM_A549_MK2206_60min_R1 2 LAALRDEPSKVQTLNEQDWER 21 2 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 LAALRDEPSKVQT(1)LNEQDWER;LAALRDEPS(0.003)KVQT(0.997)LNEQDWER 189.2 3.9259e-45 24460000.0 5293.3 5668.700000000001 5493.2 4218.4 9208.5 7043.1 6357.6 6570.5 10195.6 8753.0 9752.0 True False 6186.67963124005 5957.212617024648 6272.21836062935 5251.908189371174 7853.9418484261905 7788.396167168594 7512.693625892649 7501.888496312339 7886.31287902761 6775.69122077749 7330.30925849216 0.8439861693519662 0.8126823039728127 0.8556553536077606 0.7164647498721614 1.0714339015543448 1.062492166772601 1.0248808557686973 1.0234068211544287 1.0758499540645328 0.9243390669947322 1.0 12.839658350180958 -6.771146007590918 24.99999417667177 1.0388984782015709 0.8110502377307105 0.8005344169423942 0.05229078487617331 48.03843282563208 123726.02695349789 0.006031421903451047 0.011499440738417988 1.693768268458264e-07 6.771146007590918 -0.22784824047086039 LAALRDEPSKVQT(ph)LNEQDWER ddPTM_A549_PD325901_60min_R1 4 LAALRDEPSKVQTLNEQDWER 21 2 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 LAALRDEPSKVQT(1)LNEQDWER;LAALRDEPSKVQT(1)LNEQDWER;LAALRDEPS(0.004)KVQT(0.996)LNEQDWER;LAALRDEPSKVQT(1)LNEQDWER 133.15 4.619800000000001e-18 37280300.0 9515.900000000001 10840.8 9832.8 11019.099999999999 9958.4 11599.6 10133.2 10859.5 14181.199999999999 12045.7 13331.7 True False 10481.94716276467 11754.39226179091 10500.112937429758 11699.724780808168 9258.95633861496 11505.136703435128 10518.824471099811 10642.89875338705 13585.213480451408 11285.132446267979 11691.985416609312 0.8965070336022063 1.0053375746682804 0.89806072820734 1.0006619375515011 0.7919062510514204 0.9840190774691908 0.8996611008560668 0.9102730096009222 1.1619252844048735 0.9652024052507482 1.0 13.513232314336454 -8.74377821384248 24.977853455236556 1.0764647186539524 0.9246308691574 0.3091956533921235 0.07464663826445338 155.5515660115749 219993.58272933253 0.012816248439576943 0.014516584478484317 1.8039387438138137e-09 8.74377821384248 -0.15183384949655243 LAANAFLAQR ddPTM_A549_MK2206_60min_R1 1 LAANAFLAQR 10 0 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 0 65.24600000000001 0.015667 1659900.0 1804.3 2348.5 2162.1 2036.0 2453.0 2261.4 1828.5 2171.9 3581.7 2563.4 2957.4 False True 2108.8217291002607 2468.0286187454585 2468.718291254043 2534.8200913995133 2092.1669494694497 2500.69984700417 2160.7147815126327 2479.7734761647916 2770.450668799598 1984.326159641381 2222.995959912295 0.9486394789415007 1.1102263176595386 1.110536562266826 1.140272018982671 0.9411474367015913 1.1249232531681395 0.9719832246559191 1.1155096639323752 1.2462688726203992 0.8926359720958151 1.0 11.11828961106577 -8.47659699947011 24.968515247397654 1.1196934394463653 1.0556351079638124 0.0 0.10930137898371516 896.979348176812 483911.6150405542 0.017467975602027064 0.021117271878235942 3.3373595707070013e-09 8.47659699947011 -0.06405833148255291 LAANAFLAQR ddPTM_A549_PD325901_60min_R1 2 LAANAFLAQR 10 0 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 89.40100000000001 0.0018936 9826700.0 6819.200000000001 7406.0 6426.1 7201.4 8314.0 7298.1 6366.5 7536.5 9372.6 8141.1 8460.8 False True 7511.480163970289 8030.129611359261 6862.213789278478 7646.214122433958 7730.053321742927 7238.6666932773405 6608.780641382479 7386.178595230121 8978.70221609447 7627.069556631178 7420.175237430186 1.012304955559476 1.0822021521610747 0.9248048152101397 1.0304627421551376 1.041761558776887 0.9755385097595476 0.8906502110685036 0.9954183504954743 1.2100391067319383 1.027882672926286 1.0 12.857237543096604 -8.590905656992026 24.998860418858413 1.0993719232938457 0.9933569473209639 0.21064792452268677 0.07056307733218825 55.60328547306738 20432.643986941242 0.014892057756502122 0.016886006865613788 2.5650411870887397e-09 8.590905656992026 -0.10601497597288179 LAAPSVS(ph)HVSPR ddPTM_A549_PD325901_60min_R1 1 LAAPSVSHVSPR 12 0 A0A0U1RRM7;A0A0U1RQW3;A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1 A0A0U1RRM7 ATRIP ATR-interacting protein 1 LAAPS(0.003)VS(0.937)HVS(0.059)PR 124.62 1.7533000000000002e-06 19489000.0 4924.9 5851.3 4850.5 4180.4 6203.1 5521.8 5279.6 5495.6 5389.7 6592.8 6780.4 True False 5424.872222480243 6344.409586139139 5179.684098425986 4438.613813622756 5767.415655533266 5476.8322915469535 5480.5180671079725 5385.985946785201 5163.189652186623 6176.529482865714 5946.4537844969345 0.9122869560717831 1.066923214417258 0.8710542932209442 0.7464303893515015 0.9698916134805519 0.9210249486552243 0.9216447761515093 0.9057475500485793 0.8682804641730558 1.038691244682438 1.0 12.537813846740995 -10.950868184073663 1.2034455712358068 1.0001780739743704 0.9065140424530155 0.23495275553656703 0.07416252439151264 0.6815168892827448 1.7490901116490398 0.05272122992030096 0.012193450941406182 1.1197777038965495e-11 10.950868184073663 -0.09366403152135494 LAAPSVSHVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LAAPSVSHVSPR 12 0 A0A0U1RRM7;A0A0U1RQW3;A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1 A0A0U1RRM7 ATRIP ATR-interacting protein 1 LAAPS(0.001)VS(0.235)HVS(0.764)PR;LAAPS(0.002)VS(0.47)HVS(0.528)PR 148.57 1.4916e-12 28017000.0 5097.5 5830.200000000001 5007.4 4558.0 6895.1 6367.700000000001 5047.2 5799.6 7766.6 8398.7 7939.2 True False 5957.833378090445 6126.932277202374 5717.524615709499 5674.710204616394 5880.839923883743 7041.525787462837 5964.210907984993 6621.711060530101 6007.477500711667 6501.427836849521 5967.6775292269185 0.9983504217363854 1.0266862187501753 0.9580820323664798 0.9509076482139481 0.9854486766555522 1.1799440825977454 0.9994191004415123 1.1095959907518511 1.0066692563882391 1.089440206011223 1.0 12.542953864565813 -7.046392580851392 24.999939492813542 1.0252266268332684 0.982699785196663 0.17262304389083427 0.06076959022697012 760.7310855502501 409940.1158804243 0.008800183110010303 0.01524270338854739 8.986848473482381e-08 7.046392580851392 -0.04252684163660536 LAAPSVSHVS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LAAPSVSHVSPR 12 0 A0A0U1RRM7;A0A0U1RQW3;A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1 A0A0U1RRM7 ATRIP ATR-interacting protein 1 LAAPSVS(0.456)HVS(0.544)PR 139.49 2.3521e-09 23401000.0 3633.7 4770.5 4472.0 4520.4 5149.1 3804.0 3759.2 4819.3 4305.6 5581.9 6322.6 True False 4002.59054901144 5172.526777071208 4775.496812320591 4799.61484142673 4787.444979430665 3773.021485212181 3902.2584131131703 4723.17528083229 4124.650605127324 5229.457881386987 5544.960282263626 0.7218429610423571 0.9328338732409497 0.8612319239861325 0.8655814644478169 0.863386703552055 0.6804415709307687 0.7037486680644259 0.8517960527039414 0.743855752821283 0.9431010530614943 1.0 12.436961411273325 -10.868895790649002 1.0700094714194814 1.0020848098897412 0.8024703990779005 0.4029301538681739 0.07845321666838442 0.38965144195376594 0.7782744736893132 0.05920146492162633 0.013724795069577262 1.3523970331470613e-11 10.868895790649002 -0.19961441081184073 LAAQESS(ph)EAEDMSVPR ddPTM_A549_MK2206_60min_R1 2 LAAQESSEAEDMSVPR 16 0 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0 J3KP36 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 1 LAAQES(0.148)S(0.852)EAEDMSVPR;LAAQES(0.138)S(0.862)EAEDMSVPR 97.417 1.4061000000000002e-06 5468400.0 1987.01 2591.5 2292.94 1808.0500000000002 2938.8 2359.1 1926.29 1998.45 3529.1000000000004 3362.0 3062.0 True False 2322.3687102696413 2723.3962808085403 2618.1133706803803 2251.022331166449 2506.5064130048186 2608.738396156159 2276.2719586983676 2281.7364074964453 2729.7644848146606 2602.5218649895933 2301.620893099158 1.0090144372744836 1.183251459427559 1.1375085178146178 0.9780161180825148 1.0890179266793933 1.1334353124694936 0.9889864857949487 0.9913606599321673 1.1860182938898345 1.1307343762791746 1.0 11.168434507060534 LAAQLGAPT(ph)SPIPDSAIVNTR ddPTM_A549_MK2206_60min_R1 1 LAAQLGAPTSPIPDSAIVNTR 21 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LAAQLGAPT(0.497)S(0.497)PIPDS(0.003)AIVNT(0.003)R 63.918 0.0016622 1631000.0 682.56 642.88 722.49 702.19 1035.7 842.5 560.19 830.4 1149.7 964.52 1191.4 True False 797.759441010184 675.5998460375056 824.9499460007098 874.2265815225068 883.3499019834943 931.6527907937615 661.9692717831891 948.1117429933433 889.2947856936364 746.6342621117674 895.5424990327687 0.8908113706181501 0.754402886258539 0.9211734193426863 0.9761977599798065 0.9863852390451118 1.0403222536060475 0.739182420151081 1.0587010041593248 0.9930235434433541 0.8337228695658445 1.0 9.80661808841695 -5.9763858490738535 4.401499065985946 0.9832394890409326 0.822695870666201 0.1656500795490341 0.09577367625331033 0.1484614718704711 6.892476766043433 0.010912623440377455 0.034849062202209104 1.0558789963262715e-06 5.9763858490738535 -0.16054361837473163 LAAQLGAPTS(ph)PIPDSAIVNTR ddPTM_A549_MK2206_60min_R1 1 LAAQLGAPTSPIPDSAIVNTR 21 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LAAQLGAPT(0.084)S(0.916)PIPDSAIVNTR 102.69 1.115e-09 2516800.0 748.16 556.74 821.1 1020.5 1308.7 934.87 705.11 1026.6 1437.8 792.57 1167.6 True False 874.431117244168 585.0756879711932 937.5443267881665 1270.5225458119855 1116.1919636244068 1033.7973228835183 833.2193599083253 1172.1236938306442 1112.1405956947995 613.5278865362292 877.6526958793518 0.9963293240591531 0.6666369176761713 1.0682406961090767 1.4476370343043308 1.2717923261274255 1.1779116360461008 0.9493725294986907 1.335521100013544 1.2671761858835355 0.6990554343612123 1.0 9.77750634017565 -5.946266643589122 7.563178119357312 1.1655634787351445 0.8368810983991657 0.24177819572227366 0.20813024473479222 0.17887502693615623 21.219942369618316 0.02301100571268999 0.07209318213185335 1.1317053172805702e-06 5.946266643589122 -0.32868238033597885 LAAQLGAPTS(ph)PIPDSAIVNTR ddPTM_A549_PD325901_60min_R1 2 LAAQLGAPTSPIPDSAIVNTR 21 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LAAQLGAPT(0.163)S(0.837)PIPDSAIVNTR;LAAQLGAPT(0.248)S(0.752)PIPDSAIVNTR 137.61 5.3179e-18 8024500.0 2822.8 2694.4 2657.3 2802.6 3478.7 3150.0 3035.2 3732.3 3019.2 3508.0 3903.1 True False 3109.36857796447 2921.466543997622 2837.640357643001 2975.7102368335873 3234.3681128635 3124.3474443791715 3150.706196925168 3657.8563485672935 2892.3135235508203 3286.5042813209725 3423.043443789447 0.90836374969354 0.8534704837877959 0.8289816954533359 0.8693171108396323 0.9448808249079433 0.9127396411073279 0.9204400261532204 1.0685976992795334 0.844953787775744 0.9601117646589609 1.0 11.741063887188588 -6.720803508163984 6.193692776941663 0.935607734055451 0.8609273604618339 0.32703174258063694 0.056295983452306186 0.23708934962392703 23.150565512307626 0.009703373863969428 0.020127154266181557 1.9019385968129923e-07 6.720803508163984 -0.07468037359361701 LAAS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 LAASPEK 7 0 O95935;Q5JT55;Q96SF7-2;Q96SF7 O95935 TBX18;TBX15 T-box transcription factor TBX18;T-box transcription factor TBX15 1 LAAS(1)PEK;LAAS(1)PEK 85.161 0.011128 9822400.0 3846.6 3927.5 4520.1 3728.5 5902.3 5381.4 4837.9 4916.7 5956.0 5914.8 6587.2 True False 4495.812039659186 4127.392974291163 5161.11814823431 4641.982667378723 5034.07948872953 5950.856176115783 5716.883807208071 5613.657281762248 4606.975509777596 4578.642571992993 4951.4164425286635 0.907985036573332 0.8335782340665582 1.042351861965089 0.9375060088882538 1.016694828067956 1.2018492577200213 1.1545956341108095 1.133747756206784 0.9304358789552423 0.9247136905444179 1.0 12.273625577994652 -6.703494055180314 4.066900339475049 1.014627487399096 0.9291106328482851 0.2071232612535313 0.09847869297283833 0.40290649630057346 13.491075131216572 0.016296271152917163 0.034476403736165555 1.9792741142532116e-07 6.703494055180314 -0.08551685455081082 LAAS(ph)PEK ddPTM_A549_PD325901_60min_R1 1 LAASPEK 7 0 O95935;Q5JT55;Q96SF7-2;Q96SF7 O95935 TBX18;TBX15 T-box transcription factor TBX18;T-box transcription factor TBX15 1 LAAS(1)PEK 97.635 0.011616 12709000.0 3426.7 3690.9 3393.3 4055.3 4666.1 4589.7 3816.4 3995.8 4909.9 4466.0 5306.0 True False 3774.576061396789 4001.945096214675 3623.5897435705424 4305.786670745471 4338.369233171122 4552.323004910188 3961.6351904142102 3916.1006343555405 4703.55397763718 4184.015997827671 4653.395637505269 0.8111444535200484 0.8600053397480203 0.7786979715125155 0.9252999328150497 0.9323018223950035 0.9782798110307964 0.8513428685247321 0.8415576364908014 1.0107788686024557 0.8991318004653398 1.0 12.18406813670497 -6.517771872177405 0.23790509344462804 1.027664498801895 0.7239763118447498 0.1975286076420486 0.06619510459223005 3.292584394339881 0.2513686597129456 0.05145876860855985 0.2915675425995191 3.035485256485978e-07 6.517771872177405 -0.3036881869571453 LAAT(ph)PK ddPTM_A549_MK2206_60min_R1 1 LAATPK 6 0 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 LAAT(1)PK 69.598 0.055001 70734000.0 7141.7 6476.1 6875.5 5980.6 8382.4 6637.8 6992.1 6983.6 8831.7 9446.9 9638.9 True False 8347.044362198829 6805.705828340417 7850.549286118673 7445.847268479336 7149.360064098132 7340.207590184962 8262.474062791622 7973.546686378028 6831.334051326863 7312.838728843004 7245.295109893358 1.1520640961609756 0.9393276222865391 1.0835375463725208 1.02768032986153 0.9867589871302512 1.0130998777623292 1.140391652440674 1.1005137217240817 0.9428648450770161 1.0093224110164147 1.0 12.82282873840686 -8.77043153431371 24.99283814327536 0.9730195092264133 1.0506972521175313 0.19625765516760219 0.06271891875852105 196.09205304611336 545018.3783081224 0.010620440722741138 0.011388383665916825 1.696557040119698e-09 8.77043153431371 0.07767774289111795 LAAT(ph)PK ddPTM_A549_PD325901_60min_R1 1 LAATPK 6 0 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 LAAT(1)PK 70.919 0.053179 450870000.0 10707.0 10780.0 9786.6 10885.0 11774.0 9881.7 10587.0 10591.0 11285.0 10597.0 11411.0 True False 11793.9667579232 11688.468432413287 10450.777527606595 11557.341728371372 10947.034858094925 9801.226711467196 10989.894078428686 10379.754196521231 10810.730694644608 9927.90361150466 10007.519340288842 1.178510513633721 1.16796860790038 1.044292513683512 1.154865789950879 1.0938809594925016 0.9793862373074673 1.0981636612167158 1.0371955170482485 1.0802607846204355 0.9920444092010234 1.0 13.288796783394995 -2.0000000000000004 0.1995895596287568 1.0179758799620398 1.7600345165733315 0.5525702724561188 0.04540180889435449 29.72021092411676 0.3299488824191421 0.03628881916068868 6.980987767743902 0.00999999999999999 2.0000000000000004 0.7420586366112918 LAAT(ph)PKK ddPTM_A549_MK2206_60min_R1 2 LAATPKK 7 1 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 LAAT(1)PKK;LAAT(1)PKK 66.62100000000001 0.014903 54399000.0 14973.0 15695.1 15909.4 11949.0 18128.7 14026.1 15536.4 13254.5 18421.5 22017.3 21562.1 True False 17500.076345296362 16493.913550807694 18165.592147854913 14876.505536410987 15461.99224494367 15510.332592228351 18359.162773581 15133.365965203842 14249.059663090666 17043.57663832105 16207.635486313957 1.0797427150970769 1.0176631603502853 1.1208045839378789 0.9178701945125184 0.9539943231077771 0.956976889400405 1.13274775886241 0.9337183069043447 0.8791572142107249 1.0515769960839123 1.0 13.984386012601684 -5.921790243070675 0.5925330579353452 0.9508786392279325 1.1114444208552487 0.07099412410621608 0.07747827591452894 2.2093603207716686 0.8127199735781615 0.014391425911914144 0.2077021572668125 1.1973186764589849e-06 5.921790243070675 0.16056578162731627 LAAT(ph)PKK ddPTM_A549_PD325901_60min_R1 2 LAATPKK 7 1 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 LAAT(1)PKK;LAAT(1)PKK 58.981 0.019403999999999998 115327000.0 9391.7 8807.9 10613.0 9808.2 12549.7 10516.3 9843.5 10590.0 11513.3 9463.099999999999 11346.8 True False 10345.138470195883 9550.172644327744 11333.262001153493 10414.030237961604 11668.252366114653 10430.658739468146 10218.099779069878 10378.774142305712 11029.436039579246 8865.598251017254 9951.215533291519 1.0395854089971728 0.9596991053382276 1.1388821760757142 1.0465083590162179 1.1725454369949917 1.0481793610612355 1.0268192609119464 1.042965465634204 1.1083506334156437 0.8909060628179178 1.0 13.28065704516704 -11.050003883522239 1.3541582065525632 1.0000142107916807 1.0695000837066417 0.2624357595733654 0.06472486012789802 0.6224656528768918 2.036168744467914 0.03923371960761972 0.008752731251126415 8.912429684783446e-12 11.050003883522239 0.069485872914961 LADALQELR ddPTM_A549_MK2206_60min_R1 2 LADALQELR 9 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ; 97.431 0.0023906999999999995 8472600.0 1416.57 1549.74 1239.1 1426.99 1930.58 1449.52 1488.21 1400.1 1912.42 1949.65 2167.1000000000004 False True 1655.652384188636 1628.6151465252674 1414.8230122070602 1776.6026140600156 1646.5942394238614 1602.907244286497 1758.5984932977374 1598.5684626264206 1479.2599235071978 1509.2227109092682 1628.949261082686 1.0163928513575688 0.9997948895245536 0.8685494668303504 1.0906433100802608 1.010832122744847 0.9840129969555466 1.0795907124380777 0.9813494507274753 0.908106813912671 0.9265007492659156 1.0 10.669725951800892 -8.523472919828793 24.997531746660187 0.9559808435061842 1.0058650718001187 0.17325393484978635 0.058174460165729386 33.220060072648714 1397575.1340412349 0.010245485353532058 0.011674653506224635 2.995898394046426e-09 8.523472919828793 0.049884228293934574 LADALQELR ddPTM_A549_PD325901_60min_R1 3 LADALQELR 9 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ;; 102.61 0.0013825999999999999 10469200.0 2243.1000000000004 2031.49 2103.2 2018.1 2922.5 2117.4700000000003 1984.3200000000002 2474.1 2128.5 2174.8 2299.2 False True 2470.8178607170566 2202.690791814776 2245.9357995690198 2142.7534535623577 2717.2336820776663 2100.22602636494 2059.834383461567 2424.752134606096 2039.0465470581364 2037.4827568463108 2016.4129758296485 1.225353085074472 1.0923807861871568 1.1138272895932613 1.062656052726861 1.3475581215994044 1.0415654191576538 1.0215339854248124 1.2025077023760162 1.0112246704915075 1.0104491397690958 1.0 10.977575428046249 -8.65755731524003 0.8202053898204846 0.9983712619870188 1.1450833248180141 0.258728086597104 0.09161276817839774 0.47806170363509065 0.6518930721025136 0.021238304485741873 0.023148884421261513 2.2001013360253596e-09 8.65755731524003 0.14671206283099536 LADAMAES(ph)PSRDVVGSGTDTALDVAVK ddPTM_A549_MK2206_60min_R1 3 LADAMAESPSRDVVGSGTDTALDVAVK 27 1 Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 LADAMAES(0.806)PS(0.188)RDVVGS(0.003)GT(0.003)DTALDVAVK;LADAMAES(0.952)PS(0.046)RDVVGS(0.001)GT(0.001)DTALDVAVK;LADAMAES(0.945)PS(0.054)RDVVGS(0.001)GT(0.001)DTALDVAVK 74.28 1.7892e-06 18004000.0 3517.4 3709.5 3190.46 3176.0 4937.4 4593.5 4281.9 4260.8 6607.099999999999 6491.4 6964.3 True False 4111.051127826447 3898.2977054444445 3642.915202587475 3954.1201425760564 4211.115000534229 5079.581121081479 5059.865804188645 4864.781448152745 5110.60239937064 5024.988231526899 5234.872105098126 0.7853202609902895 0.7446786907454681 0.6958938307279219 0.7553422630373771 0.8044351258234403 0.9703352859632594 0.9665691353301552 0.9293028273632592 0.9762611763510971 0.9599065900068837 1.0 12.353938575286247 -7.163594229057319 2.3801393054148314 0.9820421495735141 0.7415280966281398 0.9365290315238123 0.027365907704115414 0.050175449815383175 0.5551882055000698 0.00438661100133986 0.008165440177109401 6.861289925625955e-08 7.163594229057319 -0.2405140529453743 LADAMAES(ph)PSRDVVGSGTDTALDVAVK ddPTM_A549_PD325901_60min_R1 2 LADAMAESPSRDVVGSGTDTALDVAVK 27 1 Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 LADAMAES(0.96)PS(0.04)RDVVGSGTDTALDVAVK;LADAMAES(0.958)PS(0.042)RDVVGSGTDTALDVAVK 105.49 4.4092e-13 23544000.0 4635.5 3991.6 4657.5 3954.6 4664.7 4915.9 5061.4 4767.2 5326.0 4885.3 4787.1 True False 5106.092547525262 4327.986140521419 4973.585957822706 4198.866660451763 4337.0675643413815 4875.8665402614515 5254.0143467043545 4672.11445620395 5102.1667416639075 4576.841324269485 4198.31704792715 1.2162236651579972 1.0308859695716146 1.1846618302155938 1.0001309125819557 1.03304908010288 1.1613859755229372 1.2514572593554927 1.112854127705941 1.2152885747833213 1.090160955454573 1.0 12.035595404651069 -4.595255789453277 4.783173849805667 1.1087218644890986 10.51428936613403 0.1221965964022882 0.08316604457065847 1954.8494529691832 379.31929485758315 0.01339678889486768 196900.7643071834 2.5394765717511273e-05 4.595255789453277 9.405567501644931 LADAMAES(ph)PSRDVVGSGTELQR ddPTM_A549_MK2206_60min_R1 1 LADAMAESPSRDVVGSGTELQR 22 1 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6 K7ESE9 BCAS3 Breast carcinoma-amplified sequence 3 1 LADAMAES(0.954)PS(0.046)RDVVGSGTELQR 108.57 9.646700000000002e-11 4010100.0 1195.3 1110.8 1258.1 1448.3 1964.5 1713.8 1607.8 1617.1 2309.7 2374.9 2365.8 True False 1397.0374177207473 1167.3349753895911 1436.5174979079204 1803.1335650166568 1675.5246523574137 1895.15317847163 1899.9164482997053 1846.3288771610498 1786.5566378329945 1838.4084405603178 1778.306567241668 0.7855998754408766 0.6564306722435631 0.8078008170076677 1.0139610336217213 0.9422023644417625 1.0657066747558621 1.068385217317544 1.0382511717453144 1.0046392847798584 1.033797250949747 1.0 10.796288340502356 -6.149412134797525 3.1627949717424877 1.0109873577836879 0.7210105751607995 0.882710868050424 0.044435595344900825 0.05653291177942562 1.067350193391492 0.005947326599952273 0.017800205116312792 7.089047154936936e-07 6.149412134797525 -0.2899767826228884 LADAMAES(ph)PSRDVVGSGTELQR ddPTM_A549_PD325901_60min_R1 2 LADAMAESPSRDVVGSGTELQR 22 1 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6 K7ESE9 BCAS3 Breast carcinoma-amplified sequence 3 1 LADAMAES(0.867)PS(0.133)RDVVGSGTELQR;LADAMAES(0.867)PS(0.133)RDVVGSGTELQR 133.15 2.0037999999999997e-22 24105000.0 7076.799999999999 6824.1 6129.200000000001 5886.5 6932.1 6683.200000000001 6287.5 6125.6 7025.2 6969.2 7912.6 True False 7795.2315263351875 7399.190856181037 6545.164369873739 6250.095735788524 6445.213210446736 6628.774235007895 6526.774253152017 6003.420102559765 6729.95527479108 6529.163522628886 6939.400362104068 1.1233292675985085 1.0662579574725037 0.9431887523908774 0.9006679842137624 0.9287853235337049 0.9552373244246727 0.9405386506872562 0.8651208734611029 0.9698179847848578 0.9408829555770442 1.0 12.760595288676805 -5.621722301528096 3.8237130484022375 0.960847776964385 1.112681980948343 0.6848112925734784 0.03923141260111052 0.11736139974114158 3.13397926036009 0.006524889225816138 0.03030754246642023 2.3893385958672593e-06 5.621722301528096 0.15183420398395808 LADFGLAR ddPTM_A549_PD325901_60min_R1 2 LADFGLAR 8 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YD28;A0A2R8YEB7;A0A087X209;A0A2R8Y644;Q9BVE2;F8VZ51;E7EUK8;H0YAZ9;F8VYH9;F8VXD2;F8VZZ0;F8VTV8;O94921-2;P11802-2;O94921;O94921-3;Q96Q40;Q96Q40-5;Q96Q40-3;Q96Q40-4;Q96Q40-6;Q00534;P11802;F8VWX7;J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;P50750;P50750-2;Q00537;Q00537-2;F5H6Z0;E5RIU6;A0A087WZZ9;P06493;A0A024QZP7;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526;K7EJ83;Q07002;Q07002-3;Q00535-2;Q00535 Q14004;J3QSD7;Q9NYV4;Q9NYV4-2;E5RGN0;P50750;Q00537;E5RIU6;G3V5T9;Q07002;Q00535-2 CDK13;CDK4;CDK14;CDK16;CDK15;CDK6;CDK12;CDK9;CDK17;CDK1;CDC2;CDK3;CDK2;CDK18;CDK5 Cyclin-dependent kinase 13;Cyclin-dependent kinase 14;Cyclin-dependent kinase 4;Cyclin-dependent kinase 15;Cyclin-dependent kinase 6;Cyclin-dependent kinase 12;Cyclin-dependent kinase 16;Cyclin-dependent kinase 9;Cyclin-dependent kinase 17;Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 18;Cyclin-dependent-like kinase 5 0 ; 85.212 0.008365000000000001 4164300.0 2380.8 2121.0 2589.1 2001.1599999999999 2777.8999999999996 2886.2 2505.3 2532.7 2780.2 2939.1 2638.6 False True 2622.497063347674 2299.744113650148 2764.811895523086 2124.7671082358906 2582.7898872347473 2862.6957441165614 2600.6405624527624 2482.1833116352864 2663.357862405932 2753.524724410057 2314.068927463513 1.1332839018854266 0.9938096857689254 1.1947837260637002 0.918195254695754 1.1161248727650406 1.237083178526755 1.1238388500827265 1.0726488231083273 1.1509414567548255 1.189906096456789 1.0 11.176216122240067 -4.91043204780622 19.76109011548741 1.082972232085763 4.097440521968476 0.0 0.0939865637764252 1497.5057859767483 334141.18513799814 0.012215693604810358 2292.749874533333 1.229045475005787e-05 4.91043204780622 3.0144682898827133 LADFGVAGQLTDT(ph)QIK ddPTM_A549_MK2206_60min_R1 1 LADFGVAGQLTDTQIK 16 0 B4DR80;Q9Y6E0-2;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;H0Y630;O00506-3;O00506-2;O00506;Q9Y6E0;Q8NBY1;B4E0Y9;Q9P289-2;Q9P289-3;Q9P289 B4DR80;Q8NBY1 STK24;STK25;STK26 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25;Serine/threonine-protein kinase 26 1 LADFGVAGQLT(0.293)DT(0.707)QIK 111.43 4.1086000000000007e-07 1258300.0 851.15 733.98 796.57 896.94 1181.5 1157.7 852.25 1057.7 1588.7 1289.7 1329.3 True False 994.8033113804173 771.336446917944 909.5356039333219 1116.6903402651665 1007.7029151235864 1280.2070455809346 1007.0927932973157 1207.6322140703987 1228.8619866325832 998.3558742644487 999.198123186385 0.9956016612681848 0.7719554601025438 0.9102655247518535 1.1175865069723165 1.008511617205685 1.281234437769387 1.0079010057442412 1.2086013634806774 1.229848173367073 0.9991570751561758 1.0 9.964626956880485 -6.224451075950358 4.241347567177572 1.1167713600713414 0.8747644614462156 0.44251629858750374 0.10651797039355776 0.1452275218775334 5.967615082699996 0.01560664079510381 0.04224071704544587 5.96415503322364e-07 6.224451075950358 -0.2420068986251258 LADFGVAGQLTDT(ph)QIK ddPTM_A549_PD325901_60min_R1 3 LADFGVAGQLTDTQIK 16 0 B4DR80;Q9Y6E0-2;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;H0Y630;O00506-3;O00506-2;O00506;Q9Y6E0;Q8NBY1;B4E0Y9;Q9P289-2;Q9P289-3;Q9P289 B4DR80;Q8NBY1 STK24;STK25;STK26 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25;Serine/threonine-protein kinase 26 1 LADFGVAGQLT(0.057)DT(0.943)QIK;LADFGVAGQLT(0.055)DT(0.945)QIK;LADFGVAGQLT(0.156)DT(0.844)QIK 226.74 6.6485e-55 18595900.0 5746.4 5770.2 6920.55 6158.4 6741.700000000001 5785.92 5737.99 6594.3 7290.9 7622.799999999999 7275.6 True False 6329.770297723908 6256.475004518659 7390.220139647863 6538.79038125882 6268.186249602394 5738.8013858356635 5956.352349398604 6462.77151337173 6984.488827787716 7141.495107084811 6380.747323828373 0.9920108063339077 0.9805238613907138 1.1582060477539515 1.0247687377997634 0.9823592647516963 0.899393299026994 0.9334882024171525 1.0128549502715842 1.0946192465112543 1.1192254989341905 1.0 12.63950968941096 -11.584618574091765 3.032804960204449 0.999284472752913 1.027226418282743 0.0 0.07775936803807008 1.3606313818143194 22.879639958817304 0.06982589364079926 0.011015810829200388 2.6024441970019206e-12 11.584618574091765 0.027941945529830092 LADFGVAGQLTDT(ph)QIKR ddPTM_A549_MK2206_60min_R1 2 LADFGVAGQLTDTQIKR 17 1 B4DR80;Q9Y6E0-2;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;H0Y630;O00506-3;O00506-2;O00506;Q9Y6E0;Q8NBY1;B4E0Y9;Q9P289-2;Q9P289-3;Q9P289 B4DR80;Q8NBY1 STK24;STK25;STK26 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25;Serine/threonine-protein kinase 26 1 LADFGVAGQLTDT(1)QIKR;LADFGVAGQLT(0.002)DT(0.998)QIKR 264.92 5.088199999999998e-100 28617000.0 8955.0 8774.4 8216.7 8974.7 13630.8 11313.3 8981.6 10780.099999999999 17361.4 14280.400000000001 13032.900000000001 True False 10466.385071270213 9220.97948150741 9381.95161359193 11173.501902889586 11625.727376611567 12510.465896839241 10613.44046028649 12308.21218767166 13429.07062045883 11054.44772183146 9796.471240258657 1.0683831774301078 0.9412551984651104 0.9576868428946888 1.140563946839553 1.1867260252687284 1.2770379854153409 1.0833942345148213 1.2563924178219386 1.370806925382681 1.128411185080924 1.0 13.258046458281454 -6.375134061849726 3.9234320290217224 1.1859600171790263 0.9845374101376986 0.4339944660406061 0.09810965947533977 0.23350631189273385 6.28801561054874 0.019740435922951237 0.048315221441843664 4.21566350523331e-07 6.375134061849726 -0.20142260704132775 LADFGVAGQLTDT(ph)QIKR ddPTM_A549_PD325901_60min_R1 4 LADFGVAGQLTDTQIKR 17 1 B4DR80;Q9Y6E0-2;C9JJV0;C9JDH9;C9J6L2;C9JCC0;C9J232;H7C279;H0Y630;O00506-3;O00506-2;O00506;Q9Y6E0;Q8NBY1;B4E0Y9;Q9P289-2;Q9P289-3;Q9P289 B4DR80;Q8NBY1 STK24;STK25;STK26 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 25;Serine/threonine-protein kinase 26 1 LADFGVAGQLT(0.209)DT(0.791)QIKR;LADFGVAGQLT(0.014)DT(0.986)QIKR;LADFGVAGQLTDT(1)QIKR;LADFGVAGQLTDT(1)QIKR 281.07 1.0392999999999996e-115 56262700.0 16494.5 17317.7 20187.1 20231.0 20229.5 20887.5 22939.5 22512.4 24623.4 22769.0 24849.6 True False 18169.00949739087 18777.123355473428 21557.118000893766 21480.622922065355 18808.649707986366 20717.399125228556 23812.475225476042 22063.37252136386 23588.564128180074 21331.36145421815 21793.256734593087 0.8336986857292724 0.8616024481402057 0.9891645963439466 0.9856545620356282 0.863049058570986 0.950633463255779 1.0926533613343705 1.0123944663278348 1.0823790319845699 0.9788055871593639 1.0 14.411594185170996 -7.594004152020403 5.789440874852678 1.0409056158093484 0.9124586188372885 0.5451141052437369 0.055005738697530566 0.11863849636850698 7.135937027920806 0.008644273079922531 0.0129016210403557 2.546805904035692e-08 7.594004152020403 -0.12844699697205986 LADFGVLHR ddPTM_A549_MK2206_60min_R1 2 LADFGVLHR 9 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 ; 78.334 0.001979 1793850.0 239.81 433.27 223.32999999999998 182.64600000000002 390.2 390.64 205.69 127.43 404.452 378.77 407.62 False True 280.28406520840963 455.32159235420266 255.00155218804204 227.39427819929057 332.8020968948142 431.9772655141544 243.0612105055145 145.4935927380079 312.84426777712696 293.2055939328102 306.396704260313 0.9147750654990132 1.4860525130432338 0.8322594487550169 0.7421564104230625 1.0861804068625598 1.4098626372532677 0.7932892460194708 0.47485364795046003 1.021043188216986 0.9569476102579232 1.0 8.259256968849362 LADFGVLHR ddPTM_A549_PD325901_60min_R1 2 LADFGVLHR 9 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 ; 78.334 0.001979 3862500.0 408.12 362.75 587.54 471.28999999999996 501.53999999999996 405.15 593.54 512.74 626.76 417.77 610.13 False True 449.55204195793567 393.3202155712357 627.4139975650352 500.4005129227507 466.31356061907 401.85059272705445 616.1274894975504 502.5129984632514 600.4194568166115 391.39193090292576 535.0878779327344 0.8401461899954471 0.7350572341328199 1.1725438445531504 0.9351744518227636 0.8714709860754686 0.7509992457305693 1.151451032450792 0.9391223744493461 1.122095045651716 0.7314535556571279 1.0 9.063632035767966 -7.771224924064241 24.999806712323643 1.0547398450058978 0.8922919173717235 0.028521901778076675 0.15462178118557063 194.90933144054773 497947.80367465556 0.0189252190587718 0.026322384242817 1.693460518578154e-08 7.771224924064241 -0.16244792763417426 LADHFGGK ddPTM_A549_PD325901_60min_R1 1 LADHFGGK 8 0 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383;B8ZZ10;A8MYV2;Q9NQ29-2;Q9NQ29;Q9NQ29-3 Q96HJ9-2;Q9NQ29 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 0 55.676 0.021894999999999998 874670.0 614.64 963.66 715.67 866.57 958.31 915.89 968.44 757.85 942.36 978.04 1154.8 False True 677.0378003259465 1044.8710101650634 764.2396698733176 920.0960607767369 891.0016115900244 908.4312955023616 1005.2945141507016 742.7340872281759 902.7558863451746 916.2863874866495 1012.7669208803395 0.6685030744659757 1.0316993857350887 0.7546056788752622 0.9084973470272417 0.8797696619233262 0.8969796275659507 0.9926217902899687 0.7333711952030979 0.8913757625105502 0.9047356984074627 1.0 9.984086473824894 -14.999999999576724 0.1722582259674873 1.5500027257994784 0.8371195021307143 0.06658571480521192 0.10657921911823004 59.68397973853298 0.6456471987473023 10.989527221756886 0.12002976276265352 1.0000000009746283e-15 14.999999999576724 -0.7128832236687641 LADILS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LADILSPR 8 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 LADILS(1)PR;LADILS(1)PR 109.29 0.0016839000000000003 22824700.0 1167.19 1107.73 862.76 1213.7399999999998 1772.96 1362.81 1378.3600000000001 1042.12 1880.35 1498.31 2087.8900000000003 True False 1364.1831369442632 1164.1087255026218 985.1123412248926 1511.1063544868593 1512.1599326259104 1507.021649639936 1628.7901702191696 1189.8437013586506 1454.4537273019305 1159.8407303785125 1569.4092901674717 0.8692335042815321 0.7417496078275412 0.6276962596033641 0.9628503947020788 0.9635217161640147 0.9602476926074024 1.037836452494404 0.7581474818666852 0.9267523369552156 0.7390301163915921 1.0 10.616005930079448 -6.2819953328613405 24.679815384026504 0.9544483403362911 0.7457787752341535 0.3050262473868015 0.10622531163355291 362.2152353831076 434881.0570611439 0.011757315288569133 0.027351255351336076 5.224018029515216e-07 6.2819953328613405 -0.20866956510213763 LADILS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LADILSPR 8 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 LADILS(1)PR;LADILS(1)PR 120.99 0.0011898 37348000.0 2730.9 2566.9 3123.9 2972.4 3855.0 2810.1 3084.5 3184.6 2848.8 2783.3 3311.4 True False 3008.138957617677 2783.221671536332 3335.9066395367367 3155.9983971898077 3584.2380990280244 2787.2154772856866 3201.8823354031656 3121.080654729632 2729.0748429688583 2607.5619629990497 2904.118792694111 1.035818150822635 0.9583704628536822 1.1486811930451584 1.086731853094078 1.2341912830993307 0.9597456840599916 1.1025314609919326 1.0747083289365889 0.9397256234264209 0.8978840567950908 1.0 11.503884752501765 -8.749770466617685 24.654167120765873 0.971537101735681 1.0764195922785795 0.33838341157194596 0.07824698799444149 171.5193978884713 362386.9027289058 0.012567704517283852 0.014190396019614398 1.7792195149399186e-09 8.749770466617685 0.10488249054289855 LADLIER ddPTM_A549_MK2206_60min_R1 2 LADLIER 7 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8;P05091;F8VP50 P00352 ALDH1A1;ALDH2 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial 0 ; 97.602 0.032188 96573000.0 2626.0 3221.8999999999996 2061.42 2718.6 3683.1 2597.7 2570.0 2868.4 3728.2000000000003 3438.3 4110.9 False True 3069.20460046405 3385.880948152435 2353.7603533402294 3384.6571220425894 3141.320868973066 2872.586889786298 3036.9357333811677 3275.0044841065846 2883.7686527120263 2661.585641996942 3090.0500749318485 0.9932540010801417 1.0957365952158917 0.7617223981045491 1.0953405414044102 1.0165922210960767 0.9296247051432178 0.982811171255258 1.0598548258732718 0.9332433400049766 0.8613406182602538 1.0 11.5934145021673 LADLIER ddPTM_A549_PD325901_60min_R1 2 LADLIER 7 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8;P05091;F8VP50 P00352 ALDH1A1;ALDH2 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial 0 ; 85.265 0.037898 203384000.0 5453.1 6245.4 6516.4 6251.1 7247.9 6109.0 6572.7 5910.4 6866.4 7498.0 6541.7 False True 6006.694697639951 6771.721776233209 6958.642090296483 6637.2162497218505 6738.832507897596 6059.250329432497 6822.827695219448 5792.512435380895 6577.829086549203 7024.575000383318 5737.112371252959 1.046989201002545 1.1803362629193712 1.212917168079932 1.1568914499529515 1.174603541263018 1.0561498428710723 1.1892442144599957 1.0096564369918097 1.1465400467853544 1.2244095192524849 1.0 12.486109060602413 -14.999999999999993 0.21641899309263846 0.29565653396673397 1.155680825658994 0.0 0.09159508330530493 32.197487945313895 0.3931871594691251 9.636177100510013 0.04157893871127754 1.0000000000000164e-15 14.999999999999993 0.8600242916922601 LADLIERDR ddPTM_A549_MK2206_60min_R1 2 LADLIERDR 9 1 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8;P05091;F8VP50 P00352 ALDH1A1;ALDH2 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial 0 ; 65.347 0.005925199999999999 7339400.0 606.56 1291.9499999999998 1036.46 963.12 854.4000000000001 426.15999999999997 457.60699999999997 326.56600000000003 1412.6299999999999 1947.25 1545.7 False True 708.9324990317874 1357.704736635383 1183.4456131322174 1199.0844432361 728.7188918168358 471.2559683378864 540.7482685390489 372.85773056643103 1092.6715605065685 1507.3648725761407 1161.8600308502182 0.6101703132975574 1.168561359014864 1.0185784704773806 1.032038637527312 0.6272002413953243 0.4056047680657659 0.4654160175760102 0.3209144997384786 0.940450253467262 1.2973721726816707 1.0 10.182220562560131 -8.96687290365295 24.998405158467698 0.9737283972263918 0.7163817548301874 0.24461365370263333 0.2756906545071094 256.204372443793 193338.5720270191 0.049602469682293704 0.052485468560577564 1.07926252236157e-09 8.96687290365295 -0.2573466423962044 LADLIERDR ddPTM_A549_PD325901_60min_R1 2 LADLIERDR 9 1 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8;P05091;F8VP50 P00352 ALDH1A1;ALDH2 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial 0 ; 170.47 1.8265e-07 27972000.0 1662.71 1988.3999999999999 1600.92 2571.5 2285.72 4945.3 3487.3 3979.5 2973.1 2761.1000000000004 3047.0 False True 1831.5070951775917 2155.9694462904076 1709.5680583140152 2730.3357146997705 2125.1789125059236 4905.027116408986 3620.011109823784 3900.1257506426437 2848.150946233753 2586.7636747877273 2672.238316524416 0.6853831426082156 0.8068028337736429 0.6397513454329645 1.021741099143776 0.7952804580955143 1.8355500278839632 1.3546737532496975 1.459497727626049 1.0658296936398 0.9680138402296921 1.0 11.38383296116276 -6.6483039330628895 2.0545679155875445 1.1424115558994092 0.7314326656406558 0.3816294017191503 0.2716332481506816 0.33282450398091906 2.8374274692882713 0.04307651718018537 0.10562043989498876 2.247481196662956e-07 6.6483039330628895 -0.41097889025875345 LADLLGK ddPTM_A549_PD325901_60min_R1 1 LADLLGK 7 0 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 93.262 0.033714 1069200.0 994.39 980.48 1055.6 1071.1 1307.9 1230.6 1196.3 1239.4 895.77 1025.5 1443.5 False True 1095.3397407687726 1063.1084905948587 1127.2393638384642 1137.2594143554043 1216.0376160100532 1220.5784016041302 1241.8258511404779 1214.6791947095091 858.1239020240853 960.7497549870752 1265.9586511004254 0.8652255267710809 0.8397655718618925 0.8904235243849549 0.8983385147428391 0.9605666148361333 0.964153450464714 0.9809371341323271 0.9594935771825234 0.6778451265198648 0.7589108492224058 1.0 10.306014568712257 -5.766936503355583 23.69654449041087 0.8821073332806926 0.8524955551687025 0.009658343999270791 0.09539354171377856 418.19600103831834 1802810.0420870986 0.017536761974293883 0.0569934229274074 1.71026534859724e-06 5.766936503355583 -0.029611778111990117 LADSGDGAGPS(ph)PEEKDFLK ddPTM_A549_MK2206_60min_R1 2 LADSGDGAGPSPEEKDFLK 19 1 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 LADSGDGAGPS(1)PEEKDFLK;LADSGDGAGPS(1)PEEKDFLK 207.24 2.5619999999999996e-56 48020000.0 10384.7 11613.5 11176.3 10492.7 14290.099999999999 11153.2 10491.6 11161.8 15835.0 15313.3 16302.4 True False 12137.383478461166 12204.577544730844 12761.267396763595 13063.411971035208 12188.045219981008 12333.42422110502 12397.787914529905 12744.019331578882 12248.39778329889 11854.014894451264 12254.064156649149 0.990478205704132 0.9959616163841077 1.041390614055112 1.0660472969653012 0.9946124864514996 1.006476224005471 1.0117286604708016 1.0399830757099375 0.9995375923222024 0.9673537483496187 1.0 13.580972689285414 -8.893271809142904 23.383802060358786 0.9997784150244473 1.0186187311219173 0.19416548905027176 0.024031056944475764 9.337088362323543 2012.4850229063854 0.003907418221144433 0.0041597680496969335 1.2785808363836083e-09 8.893271809142904 0.018840316097469945 LADSGDGAGPS(ph)PEEKDFLK ddPTM_A549_PD325901_60min_R1 2 LADSGDGAGPSPEEKDFLK 19 1 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 LADSGDGAGPS(1)PEEKDFLK;LADSGDGAGPS(1)PEEKDFLK 178.11 3.3595999999999995e-35 94771000.0 13895.7 13693.5 14919.5 16016.2 17692.8 15343.3 16141.900000000001 17949.0 15923.2 16539.2 17958.0 True False 15306.38123452633 14847.499302342423 15932.026988241729 17005.484298570653 16450.118764846437 15218.349251854908 16756.1888376866 17590.993114281904 15254.003278419588 15494.912089402464 15749.27984514128 0.9718781674482986 0.9427414744251268 1.0116035237736174 1.0797626599934294 1.0444997438991706 0.9662885796362196 1.0639336529953118 1.116939522774992 0.9685524308672129 0.9838489278087664 1.0 13.942998240695532 -2.0218837991930374 22.468810248892712 1.0037152856374418 0.0026786226239070565 0.0 0.05370952774156929 0.0 0.0 0.007363740593730085 0.0 0.009508591736395634 2.0218837991930374 -1.0010366630135348 LADSSDLPVPRTPGS(ph)GAGEK ddPTM_A549_PD325901_60min_R1 2 LADSSDLPVPRTPGSGAGEK 20 1 Q14207;H0YET3 Q14207 NPAT Protein NPAT 1 LADSSDLPVPRT(0.056)PGS(0.944)GAGEK;LADSSDLPVPRT(0.383)PGS(0.616)GAGEK 101.5 4.959399999999999e-10 11881300.0 4555.6 5907.9 5564.3 5854.700000000001 6437.700000000001 5753.0 5824.6 6338.700000000001 6214.5 5851.6 6399.2 True False 5018.081158344532 6405.779466776849 5941.926858854079 6216.331522011568 5985.538160859331 5706.14947540107 6046.258340343416 6212.26965588605 5953.326176505891 5482.128977359694 5612.138967871034 0.8941477014508324 1.1414149762593786 1.0587633151764504 1.1076581598566038 1.066534202935097 1.0167512793372078 1.0773536391307619 1.1069343955042288 1.0607945046600098 0.9768341462576684 1.0 12.454335018098893 -10.430995749006929 0.889468540400908 1.0018189421375627 1.0630756886155242 0.1499601904157919 0.06167262672301044 0.8594477992484508 1.2766794030234097 0.031439773598570066 0.010475376486074927 3.7068435012453665e-11 10.430995749006929 0.06125674647796142 LADVAPT(ph)PPKTPAR ddPTM_A549_MK2206_60min_R1 2 LADVAPTPPKTPAR 14 1 Q9UMN6;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 LADVAPT(0.995)PPKT(0.005)PAR;LADVAPT(0.564)PPKT(0.436)PAR 41.202 0.038257 9289000.0 3917.7 3951.3 3650.2999999999997 3501.4 5281.4 3872.7 4210.0 3704.4 5690.6 5620.4 5419.9 True False 4578.91198143108 4152.40429263314 4167.967429149734 4359.2431571838215 4504.513056228276 4282.506543509795 4974.902504877322 4229.510044249205 4401.688186020884 4350.747736462676 4073.989248369734 1.1239381604316698 1.019247729800658 1.0230678519383936 1.070018326368494 1.105676225834622 1.0511825835631505 1.2211378581492578 1.0381740810783202 1.0804368685514532 1.0679330433195646 1.0 11.992226457566739 -10.517603945180177 0.8084230507173792 0.999550843193994 1.0803084042667872 0.048983333706081766 0.05739095788692905 0.7609480470184518 0.8847173372892583 0.03675127455493892 0.010176668673894244 3.036659202984951e-11 10.517603945180177 0.0807575610727932 LADVAPT(ph)PPKTPAR ddPTM_A549_PD325901_60min_R1 1 LADVAPTPPKTPAR 14 1 Q9UMN6;Q9UMN6-2 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 LADVAPT(0.957)PPKT(0.043)PAR 50.077 0.010487 8157600.0 1976.0 1704.1 2124.3 2215.8 2590.3 2379.1 2006.5 2602.9 2498.9 2307.7 2695.6 True False 2176.602065345684 1847.7104875394693 2268.467772453629 2352.6649335530824 2408.3662640498806 2359.725398388091 2082.858455498929 2550.9831175644536 2393.879923158833 2161.991428165454 2364.0582888162844 0.9207057523253954 0.7815841497142791 0.9595650763710574 0.9951805946083898 1.0187423361950105 0.9981671812202385 0.8810520727650264 1.0790694669553875 1.0126145935079633 0.9145254321322137 1.0 11.207049892068174 -5.931598374643011 5.703571779482934 1.0014143917927276 0.8522291155470705 0.42256469336927094 0.059024789285064966 0.09842563098239213 5.880760426291625 0.006647399491295041 0.021236708144968044 1.170581416882551e-06 5.931598374643011 -0.14918527624565714 LAEALPK ddPTM_A549_MK2206_60min_R1 2 LAEALPK 7 0 P20290;P20290-2;D6RDG3;H0Y9Y1 P20290 BTF3 Transcription factor BTF3 0 ; 81.297 0.011211 1468400.0 1517.2 1802.0 2278.6 2123.1 2490.3 2060.2 2013.5 2154.3 3122.2 2511.9 2834.1 False True 1773.266268021347 1893.7141030356893 2601.739743051417 2643.259595309581 2123.980168880463 2278.2089965499194 2379.3268868338437 2459.6786222670526 2415.0266851288793 1944.4600454096844 2130.314752819178 0.8323963703836128 0.8889362947562653 1.2212935856583507 1.2407835939790546 0.9970264563345244 1.0694236584218477 1.116889832211476 1.1546080779903565 1.1336478245446708 0.9127571608075565 1.0 11.056850888251105 -5.627332495878763 6.777869729956345 1.0895355537419793 0.8468512801556201 0.48477390240543106 0.09332235687294461 0.11735559552379524 6.539942515216965 0.012006333195732206 0.047452339917965804 2.3586717425308814e-06 5.627332495878763 -0.24268427358635924 LAEALPK ddPTM_A549_PD325901_60min_R1 1 LAEALPK 7 0 P20290;P20290-2;D6RDG3;H0Y9Y1 P20290 BTF3 Transcription factor BTF3 0 81.297 0.042876 1621900.0 1460.4 1164.5 1078.7 1150.5 1631.5 1632.6 1035.3 1683.7 1623.0 1325.7 1722.3 False True 1608.6587329103418 1262.6365018131055 1151.9070687500498 1221.5637720249208 1516.9090683694483 1619.3046468868054 1074.6989080378983 1650.1172826629015 1554.7909541345336 1241.9950757546223 1510.4680185592401 1.0650068145400131 0.8359240224215215 0.7626159935837611 0.8087319671886263 1.0042642742057868 1.0720549041689602 0.7115006043378527 1.0924543005133374 1.0293438424585586 0.8222584394334276 1.0 10.56077992258134 -7.803747222733247 0.7805998501184018 1.0167369082323248 0.8779945453028554 0.0 0.13463036652352717 0.7732448569832455 0.9510016722851165 0.024156783234945436 0.04317227112151235 1.5712770861806826e-08 7.803747222733247 -0.1387423629294694 LAEALPKQS(ph)VDGK ddPTM_A549_MK2206_60min_R1 2 LAEALPKQSVDGK 13 1 P20290;P20290-2;D6RDG3 P20290 BTF3 Transcription factor BTF3 1 LAEALPKQS(1)VDGK;LAEALPKQS(1)VDGK 87.429 5.4122e-05 7199900.0 5930.7 6403.299999999999 6757.1 6993.1 7462.4 6302.5 5276.1 6303.5 8407.0 8011.4 9252.099999999999 True False 6931.657168306223 6729.200619294359 7715.358385751219 8706.409813932185 6364.690845381501 6969.426366739086 6234.699075055403 7197.040428659132 6502.827923220324 6201.619175841055 6954.548225030281 0.9967084768149755 0.9675970892077693 1.1093974958693489 1.2519015660279322 0.915183939982498 1.0021393397856178 0.896492320322972 1.0348681461084837 0.9350467798635489 0.8917357354027194 1.0 12.76374108344428 LAEAPSPAPTPSPTPVEDLGPQT(ph)STSPGRLPLSGKK ddPTM_A549_PD325901_60min_R1 1 LAEAPSPAPTPSPTPVEDLGPQTSTSPGRLPLSGKK 36 2 A0A0G2JPP5;Q14160-3 A0A0G2JPP5 SCRIB Protein scribble homolog 1 LAEAPSPAPTPSPTPVEDLGPQT(0.247)S(0.247)T(0.247)S(0.247)PGRLPLS(0.01)GKK 97.301 7.795099999999999e-10 4758400.0 1105.1 1065.9 1012.2 1136.9 1265.1 1829.7 1499.6 1913.6 1176.7 1266.8 1505.8 True False 1217.2889384683776 1155.727133776376 1080.8939788530633 1207.123730912762 1176.2437403580682 1814.799529835101 1556.6680986126062 1875.4317468098416 1127.2473910844767 1186.81403180656 1320.5961460526642 0.9217722936015847 0.8751556160684771 0.8184894239498699 0.9140748551485044 0.8906914834439935 1.3742274920759374 1.178761654928022 1.4201402543961772 0.853589793105093 0.8986956651009573 1.0 10.366973625458183 -7.044404273638219 24.99629664853864 1.0229564941491684 0.8804298230672957 0.21114269336960134 0.18009592231786625 841.3558566420265 473619.2893592245 0.030546896223042977 0.052910591756789596 9.02808680909868e-08 7.044404273638219 -0.14252667108187278 LAEDDWT(ph)GMESEEENKKDDEEMDIDTVK ddPTM_A549_PD325901_60min_R1 1 LAEDDWTGMESEEENKKDDEEMDIDTVK 28 2 H3BTA6;H3BSK1;H3BUB4;H3BRI5;O95149 H3BTA6 SNUPN Snurportin-1 1 LAEDDWT(0.522)GMES(0.478)EEENKKDDEEMDIDTVK 69.482 9.091299999999999e-05 8926000.0 1719.7 1463.1 1856.1 1812.8 1776.3 1506.5 1500.7 1173.7 1675.9 1657.3 1675.3 True False 1894.2826780237706 1586.4005717498956 1982.066107636013 1924.7725388324875 1651.5388159023287 1494.2315634784823 1557.8099597145492 1150.2896327501621 1605.4677510992394 1552.6577951634133 1469.2487206016915 1.2892865935238098 1.079735887808177 1.3490337475497756 1.3100386012548293 1.1240702766962323 1.0170038214268853 1.0602765466942792 0.7829100795671218 1.092713390583565 1.0567698806826689 1.0 10.520862926713502 -6.997211018288599 3.6489713492396993 1.02336064358381 1.2502273692006236 0.581411260350333 0.10014303898704131 0.14110519406720667 4.089161267161243 0.014857884292394421 0.02813335631392153 1.0064425321167741e-07 6.997211018288599 0.22686672561681354 LAEDDWTGMES(ph)EEENKKDDEEMDIDTVK ddPTM_A549_PD325901_60min_R1 1 LAEDDWTGMESEEENKKDDEEMDIDTVK 28 2 H3BTA6;H3BSK1;H3BUB4;H3BRI5;O95149 H3BTA6 SNUPN Snurportin-1 1 LAEDDWT(0.493)GMES(0.507)EEENKKDDEEMDIDTVK 54.703 0.0011532 8684000.0 1254.2 1230.1 980.48 1042.3 1217.0 1103.5 975.66 868.5 1364.7 1564.1 1583.4 True False 1381.5254607067598 1333.764844036326 1047.0212689052078 1106.6805037649508 1131.5221184220773 1094.513461864259 1012.7892752016382 851.17708617493 1307.3464048720864 1465.342459069024 1388.6518379995928 0.99486813245925 0.9604746182870908 0.7539840010678867 0.7969459827735995 0.8148349985638438 0.7881842171763862 0.7293327582100066 0.6129521186542221 0.9414500950471286 1.055226673073005 1.0 10.439469217636336 -8.974594422662669 24.436472725750416 0.9741693365909239 0.8047777528234344 0.41430586832309635 0.10140837239955101 108.30514664625659 104175.04874714084 0.018226208169117013 0.018936914161053826 1.0602433992043977e-09 8.974594422662669 -0.16939158376748942 LAEDEGDS(ph)EPEAVGQSR ddPTM_A549_MK2206_60min_R1 3 LAEDEGDSEPEAVGQSR 17 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 LAEDEGDS(1)EPEAVGQSR;LAEDEGDS(0.987)EPEAVGQS(0.013)R;LAEDEGDS(1)EPEAVGQSR 390.97 9.248199999999995e-303 1252400000.0 24343.0 24544.0 22931.0 21885.0 30137.0 25566.0 23601.0 22700.0 36043.0 34533.0 34754.0 True False 28451.503270790712 25793.184764099875 26182.960610862803 27246.825982454975 25703.8872222425 28271.377150662698 27888.99620370775 25917.794515834412 27879.318048843837 26731.97131578989 26123.62263839585 1.0891101768164957 0.9873509934334181 1.002271429705149 1.042995696255705 0.9839327254889821 1.0822150335731053 1.0675776705914133 0.9921209961799511 1.067207195370657 1.023287301528384 1.0 14.673067353005557 -7.230052542625011 24.991091531375186 1.0353160427027874 1.0194223006569836 0.0467306590172919 0.03754928559980412 2232.087698011455 1777257.7428710186 0.005801228668376545 0.010047175845979498 5.887724190835324e-08 7.230052542625011 -0.01589374204580385 LAEDEGDS(ph)EPEAVGQSR ddPTM_A549_PD325901_60min_R1 3 LAEDEGDSEPEAVGQSR 17 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 LAEDEGDS(1)EPEAVGQSR;LAEDEGDS(1)EPEAVGQSR;LAEDEGDS(1)EPEAVGQSR 366.01 1.0189999999999996e-245 1732200000.0 28778.0 28523.0 28161.0 29283.0 33707.0 28272.0 27956.0 29714.0 31113.0 30918.0 32900.0 True False 31699.521374756125 30926.73331147721 30072.174805849754 31091.744403481774 31339.536602837252 28041.762205551713 29019.880878110187 29121.330959817955 29805.428808371995 28965.832203501122 28853.508570283335 1.09863662845509 1.0718534709962142 1.0422363274330368 1.077572397400004 1.0861603373641122 0.9718666323454455 1.005766103190591 1.0092821428937226 1.0329914899524233 1.003892893404772 1.0 14.816459139986241 -7.244916575354415 24.995745814188655 1.0118674932922742 1.0733910961538053 0.7674378786840506 0.01927196291113135 377.80840708780755 571550.0417835345 0.003113221019228818 0.005383677512406893 5.6896221363332304e-08 7.244916575354415 0.061523602861531135 LAEEGS(ph)DEDLDLVQHQIISECSDEPK ddPTM_A549_PD325901_60min_R1 1 LAEEGSDEDLDLVQHQIISECSDEPK 26 0 Q8NA03 Q8NA03 FSIP1 Fibrous sheath-interacting protein 1 1 LAEEGS(1)DEDLDLVQHQIISECSDEPK 98.00200000000001 1.128e-09 3734000.0 1221.0 1084.0 963.53 1361.8 1456.6 1388.1 1245.9 1178.1 1036.9 738.45 1646.5 True False 1344.955021147308 1175.3524842983302 1028.9209399765782 1445.9152931278038 1354.2934409972029 1376.7957738230875 1293.31340628264 1154.6018712984296 993.322698916881 691.8241409753342 1443.99093802345 0.9314151396187406 0.8139611221571549 0.7125535991139778 1.0013326642527187 0.9378822299612032 0.9534656607386055 0.8956520240029628 0.7995908013653193 0.687900922893984 0.4791055973815946 1.0 10.495845973071622 -5.2279132976502565 19.623067390032162 0.8597813883436107 0.9314175237746092 0.0 0.15306463222523398 2437.283299333752 1426107.9703606442 0.017638337103825386 2.0745931445835684 5.916797450562557e-06 5.2279132976502565 0.07163613543099845 LAEETEGPS(ph)DGESAAEK ddPTM_A549_MK2206_60min_R1 2 LAEETEGPSDGESAAEK 17 0 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 LAEETEGPS(1)DGESAAEK;LAEETEGPS(1)DGESAAEK 184.99 2.8765999999999994e-39 11032900.0 4202.8 4218.200000000001 3431.2 3003.8 5522.6 4598.9 4379.3 4015.4 5968.0 5760.5 5913.1 True False 4912.129891405296 4432.888362611068 3917.795754567726 3739.731134845708 4710.232855743981 5085.552545497247 5174.962123422624 4584.595246646763 4616.2575289376555 4459.1990491589995 4444.714076742207 1.1051621783972403 0.9973393757332966 0.8814505695806893 0.8413884606018971 1.0597381011280682 1.1441799084688813 1.1642958431233128 1.0314713539474925 1.0385949352947317 1.0032589210839429 1.0 12.117874899817553 LAEETEGPS(ph)DGESAAEK ddPTM_A549_PD325901_60min_R1 1 LAEETEGPSDGESAAEK 17 0 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 LAEETEGPS(1)DGESAAEK 211.78 5.3793999999999994e-55 10654000.0 3436.8 3476.0 3629.3 3538.8 3849.6 2966.0 3963.0 3818.8 4098.0 4085.6 3997.5 True False 3785.7014059615626 3768.9347190230615 3875.6061227538253 3757.383638802079 3579.2173763990354 2941.845879374166 4113.814133636813 3742.6310382093566 3925.7753111788747 3827.6345187471425 3505.8328422403524 1.0798294089635958 1.0750468971631224 1.1054737339607938 1.0717520794291426 1.0209321258202908 0.8391289635743789 1.1734199315127467 1.0675440634578806 1.119783939461918 1.0917903650823086 1.0 11.775541494843969 -6.531857696164683 22.732213767716782 1.048740059455361 1.0861102435740122 0.05118087776295521 0.0800123287976748 196.70716025943992 498006.8179617809 0.011962010783919586 0.024942013540450697 2.9386123796172867e-07 6.531857696164683 0.03737018411865112 LAEETEGPS(ph)DGESAAEKR ddPTM_A549_MK2206_60min_R1 2 LAEETEGPSDGESAAEKR 18 1 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 LAEET(0.002)EGPS(0.996)DGES(0.001)AAEKR;LAEETEGPS(0.975)DGES(0.025)AAEKR 133.74 4.6195e-13 42004000.0 6997.8 8478.5 7697.6 5842.4 9329.5 7410.6 6748.6 6155.700000000001 12305.400000000001 12412.4 11588.8 True False 8178.857560216049 8910.019435398504 8789.23542794373 7273.788262275306 7957.142908713917 8194.784773241838 7974.733264706667 7028.289326040618 9518.246547685902 9608.430219213806 8710.981125391092 0.9389134751280783 1.02284912653837 1.0089834085766227 0.835013663509544 0.9134611582982473 0.9407418814575748 0.9154804895009607 0.8068309671288689 1.0926721583567391 1.1030250302353193 1.0 13.08861950463671 -8.78541956466659 24.999999617232135 1.0437618548173204 0.9261116961260478 0.4754377699633655 0.06552104493959486 174.30641777186742 181718.35554759778 0.011972149181884861 0.012748497550565034 1.6390055920893661e-09 8.78541956466659 -0.1176501586912726 LAEQAER ddPTM_A549_MK2206_60min_R1 2 LAEQAER 7 0 P31947-2;P31947;F8WEB6;A2IDB1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q04917;P27348;E9PG15;P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;P61981;P62258;B4DJF2;I3L3T1;I3L0W5 P31947-2;P63104;P27348;P31946-2;P61981;P62258 SFN;YWHAH;YWHAZ;YWHAQ;YWHAB;YWHAG;YWHAE 14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon 0 ; 180.18 5.375399999999999e-06 68005000.0 11156.5 10940.1 10416.8 8793.8 13125.5 9997.599999999999 9076.8 9576.3 14231.099999999999 14497.2 14879.300000000001 False True 13039.444449762832 11496.9043610548 11894.058876247695 10948.28139476868 11194.756337244715 11055.539396130216 10725.937067997738 10933.769851188776 11007.7785723969 11222.272451257326 11184.359162211074 1.1658642449376617 1.027944846397613 1.0634546605436728 0.9788921507241972 1.0009296174132865 0.9884821504556018 0.9590122162955728 0.9775946652474312 0.9842118276735252 1.0033898490290218 1.0 13.449194975241394 -2.000000000000276 0.7298586025506794 0.9883343814110708 27.79265473412515 0.8526726139681146 0.021118976485147396 77.52012824251504 0.3394313454220284 0.0031237406496201236 3411.10987264448 0.00999999999999365 2.000000000000276 26.80432035271408 LAERLS(ph)PFLAESK ddPTM_A549_MK2206_60min_R1 4 LAERLSPFLAESK 13 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 LAERLS(0.998)PFLAES(0.002)K;LAERLS(0.999)PFLAES(0.001)K;LAERLS(1)PFLAESK;LAERLS(1)PFLAESK 53.777 0.0059275 16004100.0 2452.8199999999997 2492.92 2653.81 2498.91 3565.5499999999997 2723.7 2372.19 2398.83 3961.4800000000005 4347.59 4259.27 True False 2866.796050308543 2619.798979877765 3030.1601630419013 3111.143062180334 3041.0623182555255 3011.9201261542657 2803.1862168752814 2738.871498608768 3064.211105183639 3365.46639946761 3201.575709128169 0.8954328464371093 0.8182842505983313 0.9464590059208857 0.9717537065608044 0.949864252650657 0.9407617997496773 0.8755645568158767 0.8554760990970283 0.9570946882333962 1.0511906339969297 1.0 11.64456641109969 -14.999999999999998 0.09955283485716578 1.3090863530886057 0.8515473034611213 0.4330339536211171 0.04813125326075021 91.86902778636329 0.6582986600455458 5.751544616564955 0.3544770014405315 1.000000000000004e-15 14.999999999999998 -0.4575390496274844 LAERLS(ph)PFLAESK ddPTM_A549_PD325901_60min_R1 2 LAERLSPFLAESK 13 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 LAERLS(1)PFLAESK;LAERLS(1)PFLAESK 100.77 4.1651000000000005e-05 33854000.0 3536.8999999999996 3276.2 3528.7 3037.4 3304.1 3461.5 3456.6 3457.2 3187.8999999999996 3109.8 3259.2 True False 3895.963484271838 3552.2968718249017 3768.178801796885 3225.0132995640997 3072.0314145261987 3433.310691656669 3588.1428045240987 3388.243433879067 3053.923649220872 2913.446697278212 2858.339061771045 1.3630165631427484 1.2427835869212367 1.3183106413771981 1.1282822750796615 1.0747610231456406 1.2011558522134766 1.2553244128780379 1.1853889131612294 1.0684259576009298 1.0192796006058924 1.0 11.4809613465548 -2.0000000140531182 0.09273704969268713 0.856873848840331 2.1708621241753487 0.6505610055786051 0.06804818717112443 54.71754929126698 0.3525005839848288 0.6146948876191386 9.170917036297109 0.009999999676415 2.0000000140531182 1.3139882753350176 LAES(ph)PQLSK ddPTM_A549_MK2206_60min_R1 1 LAESPQLSK 9 0 Q96A19 Q96A19 CCDC102A Coiled-coil domain-containing protein 102A 1 LAES(0.991)PQLS(0.009)K 75.566 0.0020624000000000003 10528000.0 1890.5 2535.6 1568.2 1882.2 3333.9 2189.1 2610.0 2252.3 3497.8 3548.4 3720.6 True False 2209.5701817126014 2664.651209576747 1790.5943408466724 2343.339084495168 2843.4877263906237 2420.7491089930268 3084.2032156127802 2571.5704223794646 2705.5538848388287 2746.8139755291695 2796.672336663856 0.7900711687763867 0.9527934948415885 0.6402588953208111 0.8379026222609016 1.0167396763335577 0.8655819551176784 1.1028117864146785 0.9195108017005256 0.9674189748185794 0.982172255047167 1.0 11.449495519541143 -6.670141357311116 5.357100458599354 0.9809458508463033 0.7997889559694331 0.4837917555411172 0.08692841604330435 0.1251583163312321 5.780282466071481 0.011259642359982535 0.02367737000710585 2.1372663233657784e-07 6.670141357311116 -0.18115689487687014 LAES(ph)PQLSK ddPTM_A549_PD325901_60min_R1 2 LAESPQLSK 9 0 Q96A19 Q96A19 CCDC102A Coiled-coil domain-containing protein 102A 1 LAES(0.996)PQLS(0.004)K;LAES(0.999)PQLS(0.001)K 150.09 2.3256e-05 29910000.0 14111.7 15819.9 15840.599999999999 15359.9 19129.7 16558.5 16312.5 16482.0 16763.9 16784.9 16831.7 True False 15544.309395515535 17153.098492943882 16915.638373266 16308.64613813611 17786.09586588233 16423.653065953178 16933.281114042515 16153.253580121129 16059.371581032603 15725.098549471053 14761.507604937317 1.0530299351210166 1.1620153545296854 1.1459289136299455 1.1048089785003612 1.20489697542366 1.1125999799952628 1.1471240991928764 1.0942821026436562 1.0879221832098767 1.0652772718290267 1.0 13.84955245210595 -9.714020601370251 0.5359191598885001 1.00024353509967 1.1370513573870284 0.42942455145488023 0.040995336527339714 0.36865002603153624 0.22585793004619029 0.0216395718724746 0.009585235710754515 1.9318766735531624e-10 9.714020601370251 0.13680782228735855 LAES(ph)REQS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LAESREQSPR 10 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 2 LAES(1)REQS(1)PR;LAES(1)REQS(1)PR 70.438 0.00090654 39435000.0 3453.2 3651.4 2928.0 2475.46 3557.4 2701.9 2459.42 2531.69 3822.8999999999996 4442.1 4708.0 True False 4036.0157373657526 3837.2406636096134 3343.234428006033 3081.9478111276217 3034.1111724592843 2987.813264623935 2906.264778751871 2890.564810475456 2957.0192539168515 3438.626524827565 3538.8736658102016 1.140480310545851 1.0843112882728756 0.9447170890291223 0.8708838184598009 0.8573663427921903 0.8442836751958183 0.8212400478801779 0.8168036170383269 0.8355820334829223 0.9716725855598788 1.0 11.78907454459919 -5.7591576587201025 2.500755966658474 0.8931098551609354 1.1347252572415372 0.7084310305719232 0.05744041445199041 0.1638027020062104 1.9779645565062263 0.010757926044897836 0.05407600637550335 1.7411746728576753e-06 5.7591576587201025 0.24161540208060173 LAES(ph)REQS(ph)PR ddPTM_A549_PD325901_60min_R1 3 LAESREQSPR 10 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 2 LAES(1)REQS(1)PR;LAES(1)REQS(1)PR;LAES(1)REQS(1)PR 88.101 0.0010094 60753000.0 3039.1899999999996 3140.65 2734.34 3022.6499999999996 3490.76 3003.8 3128.5 3298.61 3351.8799999999997 3200.44 3525.2999999999997 True False 3347.726331466574 3405.3235976121323 2919.9087553221552 3209.352225563777 3245.5810600682394 2979.3380487067175 3247.5567794808867 3232.816635840517 3211.0121400766857 2998.363672209494 3091.7104487179254 1.08280719912009 1.1014367787980457 0.9444315060399614 1.038050709727567 1.049768765187607 0.9636536467838356 1.0504078028482868 1.0456401689172108 1.0385876016973816 0.9698074001246978 1.0 11.59418949598197 -5.713195579991454 24.999920851121615 1.018632510781558 1.0921223046121769 0.4066886426700621 0.03682501986690357 81.23638468418982 42095.484671011334 0.004421730612767948 0.01712523362048423 1.935550112835848e-06 5.713195579991454 0.07348979383061893 LAEVEAALEK ddPTM_A549_MK2206_60min_R1 2 LAEVEAALEK 10 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 147.95 9.3883e-08 1987790.0 1304.47 979.1300000000001 1164.1399999999999 1220.32 1629.1399999999999 1138.94 1124.47 1161.3600000000001 1899.96 1883.94 1773.13 False True 1524.6326447705023 1028.9635347976334 1329.232557041989 1519.2984547822464 1389.4956641087078 1259.4618748328153 1328.7716436245605 1325.986336515836 1469.6220936126665 1458.3566455468451 1332.8128851015388 1.1439209973231539 0.7720239999924994 0.9973137053973806 1.1399187926266938 1.0425286847394568 0.9449652602487143 0.9969678853482344 0.994878089293695 1.1026469732101256 1.0941945878890134 1.0 10.380258537943847 -8.662698477608547 24.02163844652384 1.0484981007667782 0.9997078710920448 0.06472620995850986 0.09748471076949446 25.535367945982745 6179.209569557426 0.016410209152197715 0.018607426957081556 2.174210167702674e-09 8.662698477608547 -0.04879022967473334 LAEVEAALEK ddPTM_A549_PD325901_60min_R1 2 LAEVEAALEK 10 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 147.95 9.3883e-08 3100400.0 2860.9 3009.9 2850.2 2633.3 3398.6 3341.0 3233.8 3374.4 3099.1 3536.2 3474.8 False True 3151.3364619167346 3263.554836244967 3043.631711644935 2795.952960341787 3159.8940605335006 3313.7920037050185 3356.8640286032614 3307.0949448344095 2968.8556044105558 3312.923728508333 3047.4216285720527 1.0340992635775752 1.0709233030462506 0.9987563529471655 0.9174814978431134 1.0369074075300009 1.0874084414954357 1.1015423652342475 1.0852108266961515 0.9742188532676684 1.0871235202398588 1.0 11.573373403776873 -8.785286297428797 24.993141649012536 0.9878255644619415 1.0403336032647879 0.0 0.05718996427565632 303.43467427388657 318017.9032752118 0.009302848639932054 0.00990594023828726 1.6395086131349608e-09 8.785286297428797 0.05250803880284638 LAGAS(ph)PATVAAAAAAGSGPK ddPTM_A549_PD325901_60min_R1 1 LAGASPATVAAAAAAGSGPK 20 0 Q13045-3;Q13045 Q13045-3 FLII Protein flightless-1 homolog 1 LAGAS(0.967)PAT(0.033)VAAAAAAGSGPK 93.152 2.8099e-06 1041500.0 1359.5 1637.5 1772.6 1677.0 2173.7 1685.6 2236.7 1890.9 1673.3 2197.3 2186.8 True False 1497.5154391889964 1775.4978718067503 1892.8992955097228 1780.584481256665 2021.0268108579035 1671.8730324588987 2321.8188424692034 1853.184516117647 1602.977020057494 2058.5621030064367 1917.8374632673435 0.7808354294204571 0.9257812019074364 0.9869967250951838 0.9284334649627471 1.0538050536434722 0.8717490738816808 1.2106442213896547 0.9662886201839285 0.835825272349496 1.0733767289639582 1.0 10.905264741788496 -5.27772384490386 3.629331438010465 0.9522838895331455 0.7644220738461768 0.19296431771869338 0.1027229590112959 0.33966264216035547 8.136099727552079 0.01413996158989052 0.16795400787376832 5.27565218005615e-06 5.27772384490386 -0.1878618156869687 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVS(ph)VLSSGSPR ddPTM_A549_MK2206_60min_R1 1 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVSVLSSGSPR 45 1 O14686;O14686-3;F8VWW4 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LAGEDKDSEPAADGPAASEDPS(0.002)AT(0.002)ES(0.002)DLPNPHVGEVS(0.279)VLS(0.239)S(0.239)GS(0.239)PR 91.305 8.222e-11 6173500.0 316.01 354.94 475.78 539.94 378.43 438.16 456.47 380.03 507.85 722.25 724.07 True False 369.3447622972752 373.0049299286838 543.2527582502424 672.2253242388275 322.76344830318953 484.52580037293126 539.4046903566152 433.9004162930641 392.82278586980385 559.0932233755897 544.2634356846205 0.6786139543485632 0.6853389470477411 0.9981430363163993 1.2351102061325243 0.5930279845038468 0.8902413217662762 0.9910728059071366 0.7972249977573223 0.721751196414064 1.0272474443783184 1.0 9.088161306990814 -11.115029755274293 1.4851266872716173 0.9994291625767131 0.8342869176799171 0.11995243347731877 0.17457377704312316 0.784823957138278 3.1144977130553575 0.1259607318629112 0.027707701031602684 7.673089161186063e-12 11.115029755274293 -0.16514224489679596 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVSVLS(ph)SGSPR ddPTM_A549_PD325901_60min_R1 1 LAGEDKDSEPAADGPAASEDPSATESDLPNPHVGEVSVLSSGSPR 45 1 O14686;O14686-3;F8VWW4 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LAGEDKDSEPAADGPAASEDPS(0.001)AT(0.001)ES(0.001)DLPNPHVGEVS(0.088)VLS(0.303)S(0.303)GS(0.303)PR 74.181 2.3653000000000001e-07 12384000.0 616.94 721.39 445.0 926.71 889.39 988.11 784.64 1124.0 1028.7 652.38 723.75 True False 679.5712946327764 782.1840670184255 475.20037600238425 983.9507719888877 826.9223146289327 980.063159766826 814.4999045714826 1101.5809382390582 985.4673164006125 611.1886154641326 634.7333382292572 1.0706406197736604 1.2323034255621705 0.7486614415560259 1.5501797569572402 1.3027869576471802 1.5440549609398966 1.2832158884922098 1.7355019374154597 1.5525690192196504 0.9629061192361372 1.0 9.310006809352874 -6.270928967978779 24.938419566261178 1.3403396491155255 1.0387119785870942 0.27828003382482325 0.2472235482229637 780.566231918368 2051310.506706124 0.03837922172626982 0.09026306168125092 5.358842981205616e-07 6.270928967978779 -0.3016276705284313 LAGESESNLR ddPTM_A549_PD325901_60min_R1 1 LAGESESNLR 10 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 89.88600000000001 0.0018655000000000002 2843400.0 2871.2 3109.7 2824.4 3042.2 3519.4 3069.5 3123.2 3173.9 3710.8 3887.0 4379.6 False True 3162.682110334273 3371.7653324930984 3016.0807684969323 3230.1097846625075 3272.209485270877 3044.5030096894825 3242.0550850806153 3110.5940746236183 3554.8479806546065 3641.5741566404304 3840.9369645718216 0.8234142188498117 0.8778496923000075 0.7852460991463206 0.8409692255969091 0.8519300148513775 0.7926459188920525 0.8440792220712823 0.8098529351861883 0.9255158346632467 0.9480952669178689 1.0 11.907242571976557 -9.112134486911106 1.18112346606867 0.9798158672783747 0.8273991580498529 0.7649021438447293 0.03152085081930338 0.11493928040781935 0.33101000025982485 0.007006290653975492 0.0063754321781687735 7.724413480306843e-10 9.112134486911106 -0.1524167092285218 LAGLTVS(ph)SPLKR ddPTM_A549_MK2206_60min_R1 2 LAGLTVSSPLKR 12 1 Q8WYL5;Q8WYL5-4 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 LAGLT(0.053)VS(0.473)S(0.473)PLKR;LAGLT(0.009)VS(0.646)S(0.345)PLKR 60.157 0.0037113 19081600.0 2696.6 3197.8 3075.8 3057.0 4221.2 3285.1000000000004 2669.2 3108.8 4253.9 4078.7000000000003 4794.9 True False 3151.7201544597697 3360.5543610918576 3511.9946904579756 3805.965137233945 3600.2670717898277 3632.7271015271062 3154.1590893155694 3549.4819203007087 3290.3984420824227 3157.3188372198247 3604.193997492211 0.874459076468339 0.9324010759215854 0.9744188833624418 1.0559823194539821 0.9989104566221697 1.0079166393525842 0.8751357700252054 0.9848198856028363 0.9129359974440536 0.8760124564373281 1.0 11.815460951664678 -6.319440930855231 0.002596706725784637 1.908381115759792 6.587258041572603e-09 0.0 0.06105206950343639 278154.1408238147 151.74511620738247 54997.76868171773 56529.208615812844 4.792466316401076e-07 6.319440930855231 -1.908381109172534 LAGLTVS(ph)SPLKR ddPTM_A549_PD325901_60min_R1 1 LAGLTVSSPLKR 12 1 Q8WYL5;Q8WYL5-4 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 LAGLT(0.001)VS(0.589)S(0.41)PLKR 77.64399999999999 0.00044119 18960000.0 2498.6 3052.6 2585.2 3087.8 2885.0 2679.3 2814.7 2655.5 3608.3 3049.4 2798.6 True False 2752.256032627898 3309.8533151006304 2760.647218070481 3278.5263930973924 2682.3675527096902 2657.4806691190847 2921.8149487629403 2602.533969300551 3456.6556992012565 2856.8603635861386 2454.38994178708 1.1213605408698575 1.3485441977857333 1.1247793885841997 1.3357805690444795 1.09288565237381 1.082745909227501 1.190444476249573 1.0603587983275409 1.4083563660159115 1.1639798203809513 1.0 11.261148760391144 -11.183918728931346 1.607602244271077 1.0002223027794013 1.2247909971943616 0.021332989053248097 0.12485061110619476 0.39214292330909645 1.824244162383552 0.09180736681742067 0.0193872662564187 6.547586899223117e-12 11.183918728931346 0.2245686944149603 LAGLTVSS(ph)PLKR ddPTM_A549_PD325901_60min_R1 1 LAGLTVSSPLKR 12 1 Q8WYL5;Q8WYL5-4 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 LAGLT(0.002)VS(0.46)S(0.537)PLKR 55.196000000000005 0.0079425 20381000.0 1868.6 2010.8 2326.6 2595.3 2208.5 2578.2 2636.1 2046.1 3059.5 2265.1 2407.6 True False 2058.2988964093847 2180.2571729032143 2484.4970669823515 2755.605786646046 2053.3825789113857 2557.203993999485 2736.41822802927 2005.288930365603 2930.9198546978446 2122.081199435617 2111.480463033865 0.9748131381959051 1.0325727427146203 1.176661167592581 1.305058623505649 0.9724847635866819 1.2110952664582961 1.29597136982147 0.9497075466586693 1.3880876029923452 1.0050205230819518 1.0 11.044039182990241 -5.676078077498186 3.896829413651428 1.1743471490895798 0.9882437605312439 0.10204264974573363 0.1444733088722963 0.31701267098710295 8.940412227416825 0.021996163120903137 0.09654705357379098 2.1082490946629045e-06 5.676078077498186 -0.18610338855833597 LAGS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 LAGSPIR 7 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LAGS(1)PIR;LAGS(1)PIR 84.743 0.013918 17974700.0 3962.4 3920.0 3697.0 3544.3999999999996 5749.9 4701.1 4084.3 4147.5 6414.6 5756.700000000001 5578.200000000001 True False 4631.156248621006 4119.511256326253 4221.290191372373 4412.778159114163 4904.097326846472 5198.567281662377 4826.3644419644725 4735.420826186046 4961.703342011312 4456.257471798211 4192.978989511994 1.1045026126305513 0.9824783922434365 1.006752049540719 1.0524207657972908 1.1695974005863652 1.2398266947355776 1.1510585800779785 1.1293690805584469 1.1833360850178711 1.0627903175629456 1.0 12.033759885701912 -6.565608725311446 8.81029557728095 1.1132427019056357 1.0268715594809887 0.30131872534080617 0.06713318453969637 0.3944004357339672 75.47726486598661 0.012543650353157725 0.026200837966402615 2.718887729299844e-07 6.565608725311446 -0.08637114242464694 LAGS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 LAGSPIR 7 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LAGS(1)PIR;LAGS(1)PIR 101.43 0.010947 32221000.0 4694.799999999999 4385.5 4126.299999999999 3532.5 4927.2 4117.6 4270.9 4686.0 4083.7000000000003 4447.5 4301.1 True False 5171.412639870909 4755.081475913586 4406.335531457611 3750.694502110416 4581.130469917217 4084.0676307859285 4433.431436626154 4592.534053904115 3912.0762904492894 4166.6840909849 3772.091966919318 1.37096674344725 1.2605953188880172 1.168141066045185 0.9943274275928173 1.214480057775114 1.0827062719049774 1.1753243228178645 1.2175032035750855 1.037110527727747 1.1046082989296377 1.0 11.88114913527769 -2.0000000000000004 0.17139840253295605 0.9819148156498769 2.3177658287060514 0.3986744200691402 0.0864632262519536 30.44940882750576 0.31061030263317035 0.10188608846781008 10.56243193220913 0.00999999999999999 2.0000000000000004 1.3358510130561745 LAGS(ph)PPGSGQWKPK ddPTM_A549_PD325901_60min_R1 1 LAGSPPGSGQWKPK 14 1 H3BLU1;Q4KMQ1 H3BLU1 TPRN Taperin 1 LAGS(1)PPGSGQWKPK 123.14 3.7921e-07 39370000.0 12188.0 9052.7 9910.2 10402.0 9444.1 11669.0 9045.7 8972.1 13534.0 12113.0 15241.0 True False 13425.316787668617 9815.602799453409 10582.765766873772 11044.507915343967 8780.778996376284 11573.971532844622 9389.93906349697 8793.144427023715 12965.21304575279 11348.183112782484 13366.453620659213 1.0044037983955911 0.7343460784753255 0.791740731476974 0.8262855824579796 0.6569266048852852 0.8658969582594348 0.7025004036211867 0.6578517141923881 0.9699815234247127 0.8490047872715253 1.0 13.706329120780216 -8.85180215547433 8.030474376396064 0.9865896719670849 0.776773901626102 0.2946440260291959 0.10335054910464112 0.13682255891489595 10.72825956134258 0.015422991658302843 0.016392098414392615 1.4066882004207999e-09 8.85180215547433 -0.20981577034098287 LAGSALTDKHS(ph)DKS ddPTM_A549_MK2206_60min_R1 2 LAGSALTDKHSDKS 14 2 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 LAGS(0.001)ALT(0.029)DKHS(0.79)DKS(0.18);LAGSALT(0.007)DKHS(0.809)DKS(0.184) 40.52 0.021527 4994100.0 2867.3 3495.1000000000004 3712.3 3229.7 3988.9 3084.8 3766.0 2975.2 5095.1 4660.0 4739.6 True False 3351.23014124546 3672.98566122089 4238.759961436747 4020.976644986741 3402.1380940638765 3411.231488475485 4450.233452106412 3396.9437111678644 3941.0679852027915 3607.302763489444 3562.626513694568 0.9406627746028077 1.030976906252201 1.1897851052146933 1.128655117096978 0.9549522188155897 0.9575046599363903 1.2491439770629689 0.9534941982018528 1.1062254126424738 1.0125402563594983 1.0 11.798725531792146 -11.095333420925009 1.424844211868584 0.9999667052873147 1.06492901135573 0.031964887838412115 0.09910483970765298 1.1260769859440973 4.081797542784385 0.06931024683028973 0.015104506011532461 8.029094677767049e-12 11.095333420925009 0.06496230606841524 LAGSALTDKHS(ph)DKS ddPTM_A549_PD325901_60min_R1 1 LAGSALTDKHSDKS 14 2 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 LAGS(0.002)ALT(0.005)DKHS(0.758)DKS(0.236) 45.257 0.0098549 3372500.0 2158.0 2599.1 2293.6 2217.8 3049.4 2526.8 3028.9 2721.3 2465.8 2736.6 2723.0 True False 2377.078571364364 2818.1352785422428 2449.2574885372314 2354.7884690107517 2835.2206638588978 2506.222578557869 3144.1664469776774 2667.021536681449 2362.171001050481 2563.8106089689213 2388.0882625191953 0.9953897469672176 1.1800800342150632 1.0256143070497357 0.9860558782390582 1.1872344537500563 1.0494681532055494 1.316603953180899 1.1168019116127672 0.9891472765577877 1.0735828525300637 1.0 11.221640443520071 -8.76159376292618 24.99803336994692 0.9948750964772723 1.1105600771453863 0.12450193009297894 0.09495095277674617 4.153220575349467 672486.3179742665 0.015245189360949337 0.016738406640728645 1.731435178533002e-09 8.76159376292618 0.11568498066811395 LAHEVGWK ddPTM_A549_MK2206_60min_R1 2 LAHEVGWK 8 0 P40429;Q8J015;M0QYS1 P40429 RPL13A;RPL13a 60S ribosomal protein L13a 0 ; 79.469 0.0043951 4486100.0 2365.3 2321.6000000000004 2267.3 2067.6099999999997 3651.9 2428.9 2496.8 2408.3999999999996 3637.8999999999996 3923.3 3986.3 False True 2764.5048139671067 2439.7595236446505 2588.8372331345886 2574.1745428185404 3114.710347642677 2685.9245858266668 2950.4362408973134 2749.798075415666 2813.921458532559 3037.0238051498113 2996.3916937169092 0.922611292697132 0.814232507973022 0.8639849184481069 0.8590914693216811 1.0394870450928924 0.8963863407640408 0.9846630689452387 0.917703143144362 0.9391033436760056 1.0135603471061887 1.0 11.549010512479523 -2.0000000000008824 0.12053820327563942 1.0201970386208719 0.49156538687940105 0.3956385046290859 0.05294729595699122 61.77681464888297 0.4929376934074186 0.17932875604608178 5.522617323824244 0.009999999999979681 2.0000000000008824 -0.5286316517414709 LAHEVGWK ddPTM_A549_PD325901_60min_R1 2 LAHEVGWK 8 0 P40429;Q8J015;M0QYS1 P40429 RPL13A;RPL13a 60S ribosomal protein L13a 0 ; 87.616 0.0029086 7251900.0 3874.8999999999996 3706.9 3888.8 3494.7 4193.4 4108.3 3074.4 3304.5 4471.5 3796.1 4797.6 False True 4268.276995449387 4019.2934723666835 4152.717353254095 3710.559681960445 3898.870050444649 4074.8433669025258 3191.3979743762334 3238.5891551698987 4283.578405060114 3556.4135981535205 4207.525614492138 1.0144387429866144 0.9552629836697561 0.9869737545864807 0.8818864154219348 0.9266420237622857 0.9684654926086226 0.7584975747703073 0.7697134734046788 1.0180754195069008 0.845250611405438 1.0 12.038756339054697 LAHGGQVNLDMEDHRDEDFVKPK ddPTM_A549_PD325901_60min_R1 1 LAHGGQVNLDMEDHRDEDFVKPK 23 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 0 55.126999999999995 0.00098677 2479800.0 986.33 1057.9 1433.2 881.93 1193.0 1240.2 954.76 1215.0 1223.1 1032.8 1268.8 False True 1086.461495502231 1147.0529457003731 1530.4655705317239 936.4048130916457 1109.2077956265712 1230.1002223869998 991.0939142647187 1190.7658718509394 1171.6973604448228 967.5888317412498 1112.7456435858808 0.9763790150649813 1.030831216740544 1.3753956974387416 0.8415263798059298 0.9968206139653725 1.1054639750580715 0.8906742704207468 1.0701150606293406 1.0529786094412081 0.8695507704915784 1.0 10.11990813729289 -6.301681101508629 24.99777650330618 1.0130444881412415 1.1178659278532341 0.18283046129048164 0.12530877309036018 703.1320421901289 436777.69056407415 0.015408609685900193 0.035806655252850345 4.992509483334744e-07 6.301681101508629 0.10482143971199265 LAHKDT(ph)K ddPTM_A549_PD325901_60min_R1 1 LAHKDTK 7 1 H0Y465;P21359-2;P21359-6;P21359 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 LAHKDT(1)K 46.687 0.034480000000000004 903850.0 596.94 1082.5 585.27 761.81 1165.2 1085.1 795.77 622.55 988.24 1316.1 993.32 True False 657.5409093559986 1173.726074034081 624.9899417144163 808.865273503959 1083.3603717217777 1076.263305363759 826.0534628120528 610.132751868973 946.707709497173 1233.001221392969 871.147937174281 0.7547982165794322 1.3473326675619122 0.7174326139618482 0.9285050666912595 1.2436009149443026 1.235454116845877 0.9482355723546796 0.7003778874206419 1.0867358678113654 1.4153752408487836 1.0 9.76677392594057 -4.976616858605248 15.404402600910094 1.0272706710337853 0.13032279522891493 0.1151345716425165 0.22690475908367475 500555.0993270325 8724755.22548385 0.025030355997840436 10794085.530241022 1.0553175034649505e-05 4.976616858605248 -0.8969478758048703 LAHYNKR ddPTM_A549_PD325901_60min_R1 2 LAHYNKR 7 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 68.398 0.023032 18139900.0 8492.3 8024.1 5546.6 5688.0 8324.2 9710.4 6451.5 6440.6 8811.7 8423.3 7351.4 False True 9354.432044299161 8700.319067581397 5923.025630415339 6039.334841614737 7739.536908931018 9631.321721872855 6697.01536289626 6312.137180447045 8441.374892512184 7891.451400470631 6447.224404364161 1.450923910445415 1.3494673865690332 0.9186938842094609 0.9367340832012422 1.2004447842225072 1.4938710238398654 1.0387439528804074 0.9790472278542569 1.309303719411127 1.22400755821821 1.0 12.654462483974756 -11.082800084841834 1.39675935851247 0.9996834959079415 1.1919148685156937 0.0 0.20264615561401197 0.8066548221100855 2.802796255802068 0.14486738779761227 0.03158934499418145 8.26418280270389e-12 11.082800084841834 0.19223137260775225 LAIEAGFR ddPTM_A549_MK2206_60min_R1 4 LAIEAGFR 8 0 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;Q04828 S4R3Z2;Q04828 AKR1C3;AKR1C4;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1 0 ;;; 136.11 0.0030041 23730400.0 4829.3 5197.469999999999 4272.76 4324.42 5780.469999999999 4882.5 4217.94 4732.89 6741.4 6505.2 7217.900000000001 False True 5644.367774950896 5461.999022810715 4878.7016170106035 5383.90309413059 4930.170520342307 5399.162909258804 4984.285100100293 5403.791651367732 5214.483663803675 5035.670801942387 5425.496226094188 1.0403412959360352 1.0067280107100554 0.8992175855816193 0.9923337644649803 0.9087040733030854 0.9951463763427328 0.9186781987107706 0.9959995226571042 0.9611072326848854 0.928149351154846 1.0 12.405539379857053 -10.792388295817167 0.8166366337396294 1.0021818658678547 0.9663276031175931 0.0 0.04730683740354848 1.5922180841209084 1.6885503142941087 0.03752565219535085 0.0073764187811725815 1.6129158294677615e-11 10.792388295817167 -0.0358542627502616 LAIEAGFR ddPTM_A549_PD325901_60min_R1 2 LAIEAGFR 8 0 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;Q04828 S4R3Z2;Q04828 AKR1C3;AKR1C4;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1 0 ; 89.55 0.007361199999999999 33167000.0 2265.62 2525.5 2523.6 2276.7 2835.6 2969.0 2375.6 2379.41 2786.6 2351.5 2690.8999999999996 False True 2495.6240745387076 2738.33274824302 2694.8666716395896 2417.326588239146 2636.4372382889396 2944.821448368814 2466.004757978201 2331.9508009389647 2669.4888926625326 2203.0258886905 2359.93635902053 1.0574963451872463 1.160341776919586 1.1419234511722467 1.0243185495232743 1.117164549040284 1.2478393483420185 1.0449454488686694 0.988141392891976 1.1311698650087665 0.9335107195877289 1.0 11.204532239264687 -13.337275014639179 0.32502667145272945 0.6830307473494667 1.1122072525793616 0.3403486618447895 0.07075918037289973 18.340349886468886 0.6351372737588955 3.818813254196661 0.023392014198227836 4.5996521084927195e-14 13.337275014639179 0.4291765052298949 LAIKLPDDQIPK ddPTM_A549_PD325901_60min_R1 2 LAIKLPDDQIPK 12 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 ; 76.32600000000001 0.0011788 7463700.0 2690.7 2699.5 2569.0 2329.9 3208.1000000000004 3559.2 3383.8 3257.5 3673.3999999999996 3474.4 3458.6 False True 2963.8578832113503 2926.9963388960723 2743.3477886519668 2473.8126314131814 2982.774123344177 3530.215055249 3512.5723606864076 3192.5266070406847 3519.0197725926027 3255.0257910551854 3033.2141258717925 0.9771344060187284 0.9649817709637655 0.9044359134597814 0.8155746771429035 0.983370774223492 1.1638528995160742 1.1580363979997093 1.0525226622842208 1.1601620019428012 1.0731275986391633 1.0 11.566631631430388 -7.023221070910318 8.499391606789873 1.0873575267050952 0.9158632737988904 0.667364037117339 0.06146266124625408 0.1543136428830894 51.40059406165686 0.011191087116700046 0.019854670754589198 9.47935808358758e-08 7.023221070910318 -0.1714942529062048 LAILGIHNEVSK ddPTM_A549_PD325901_60min_R1 2 LAILGIHNEVSK 12 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;H7C5W8 P12814-4 ACTN1 Alpha-actinin-1 0 ; 115.18 2.8949e-05 3933400.0 1646.76 1559.13 1508.1799999999998 1556.0900000000001 1824.33 1768.82 1469.5900000000001 1907.0 1770.6599999999999 1556.73 3643.8 False True 1813.9378629193616 1690.5233568672115 1610.534164223092 1652.2061451631992 1696.1953543968334 1754.4153163704027 1525.5160516405044 1868.9633889874397 1696.245317836015 1458.437802126797 3195.6356999513173 0.5676297404447558 0.5290100360604199 0.5039792753121475 0.5170195542590693 0.5307849560019227 0.5490035414228004 0.4773748308243472 0.5848487013134543 0.5308005909002255 0.4563842499784988 1.0 11.64188723616014 -10.671191407385848 0.612631450427156 1.059964398387426 0.5221943550149712 0.0 0.16300200045032434 0.11728189489047684 0.06507865208417526 0.03449049566103591 0.006116415198277174 2.1321050195724293e-11 10.671191407385848 -0.5377700433724548 LAIQGPEDS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 LAIQGPEDSPSR 12 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LAIQGPEDS(1)PSR;LAIQGPEDS(0.997)PS(0.003)R 272.06 3.387099999999999e-77 442650000.0 14896.0 18047.9 17018.1 14490.8 21102.0 16341.599999999999 15050.9 15292.9 21669.0 22314.0 23516.0 True False 17410.080627765623 18966.46102118638 19431.522479251867 18041.04665051673 17997.92375365036 18070.857265323848 17785.4537079948 17460.71540754204 16761.006098282513 17273.251902253956 17676.328191417302 0.9849376204849515 1.0729864718395248 1.0992963170194359 1.0206331572456613 1.0181935727120754 1.0223196282414642 1.006173539854871 0.9878021735317207 0.94821763415893 0.9771968315592229 1.0 14.109531002119004 -7.575128187066477 1.0222492245695947 0.9758987218160009 1.0487898355375935 0.4632963197752522 0.02990694327432341 0.3272712599759678 0.6868777303080269 0.005806845899650616 0.010930748068017056 2.65993983174777e-08 7.575128187066477 0.07289111372159263 LAIQGPEDS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 LAIQGPEDSPSR 12 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LAIQGPEDS(0.998)PS(0.002)R;LAIQGPEDS(1)PSR 286.26 6.261099999999999e-93 799070000.0 29821.2 30137.1 29517.9 29529.2 34610.6 36570.2 31986.8 31566.3 35425.2 33862.4 39160.8 True False 32848.62627079288 32676.859183161647 31521.162199552327 31353.151618321008 32179.670856088018 36272.38441601116 33204.07517784857 30936.685383216696 33936.40203845142 31724.322285006656 34344.2698607645 0.9564514372838577 0.9514501055237825 0.9177997473040665 0.9129077935105385 0.9369735034853847 1.0561407932986624 0.9668010213191777 0.9007815716752013 0.9881241376227645 0.9237151470571539 1.0 15.06778179349654 -8.17850855214021 0.29926327169936856 1.0055745336434998 0.9297341169469202 0.0 0.04585596309332535 1.821262134796438 0.4638660309980993 0.03266412125247662 0.04915942789083515 6.629662923896357e-09 8.17850855214021 -0.0758404166965796 LAIRES(ph)IESEIR ddPTM_A549_MK2206_60min_R1 2 LAIRESIESEIR 12 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 LAIRES(1)IESEIR;LAIRES(0.999)IES(0.001)EIR 112.72 1.2705e-05 14184500.0 1349.0 1072.56 1635.3400000000001 1141.36 2072.34 1611.26 1467.85 1422.3200000000002 2184.42 2025.19 1716.62 True False 1576.6782201165297 1127.1487227258378 1867.2558024232862 1420.9932512375979 1767.5015312121973 1781.7624637321742 1734.539344841847 1623.938215672317 1689.6523578019426 1567.6981724444602 1290.3358776981959 1.2219130285124942 0.873531258184137 1.447108334113941 1.101258421003126 1.3697995706088617 1.380851679417474 1.344254139423029 1.2585391476281569 1.3094670829552375 1.2149535632854334 1.0 10.333530936370135 -10.7747422679148 0.9839367398692191 0.997505091189517 1.258074271872228 0.05761111051413015 0.1620310413277996 0.575215045911782 0.9734062175118932 0.10612786027261406 0.025812006447725414 1.6798006001450072e-11 10.7747422679148 0.26056918068271095 LAIRES(ph)IESEIR ddPTM_A549_PD325901_60min_R1 2 LAIRESIESEIR 12 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 LAIRES(1)IESEIR;LAIRES(0.995)IES(0.005)EIR 130.24 2.0625e-08 28267000.0 1493.3 1382.47 1581.48 1794.79 1871.6799999999998 1424.49 1563.51 1364.47 1701.63 1763.3799999999999 1590.08 True False 1644.8987166906422 1498.9755986788873 1688.8087430117985 1905.650102036166 1740.2196537454665 1412.8894257281543 1623.0102286355007 1337.2545754439927 1630.1164086777242 1652.0398858596861 1394.510240347602 1.1795529850541846 1.0749118617481404 1.2110407612287153 1.3665371876804253 1.2479074039009506 1.0131796704310834 1.1638568019629185 0.9589420979157978 1.1689526268888453 1.184673900600322 1.0 10.44554281325166 -7.254054653216489 24.884651264106772 1.074414205947117 1.2162411372910493 0.33616487452123434 0.093737706095459 502.7485163329676 1694134.6673245572 0.014486804446745834 0.02478854717459372 5.5711563503775286e-08 7.254054653216489 0.14182693134393243 LAIRES(ph)IESEIRR ddPTM_A549_MK2206_60min_R1 4 LAIRESIESEIRR 13 2 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 LAIRES(1)IESEIRR;LAIRES(0.813)IES(0.187)EIRR;LAIRES(0.999)IES(0.001)EIRR;LAIRES(0.999)IES(0.001)EIRR 160.8 2.7896e-19 92664000.0 5359.26 4719.099999999999 4503.74 4616.389999999999 7058.23 4918.33 4406.62 4306.299999999999 8251.08 7510.219999999999 7717.17 True False 6263.772066672878 4959.282033094189 5142.438054230834 5747.405757237623 6019.9737169807395 5438.784416076775 5207.245813786818 4916.731212490648 6382.22355426725 5813.65608592568 5800.78370594318 1.0798147947242618 0.85493310636857 0.8865074643210985 0.9907981487655075 1.0377862754670526 0.9375947616361701 0.8976797063561852 0.8475977491546913 1.1002347058257587 1.0022190760136964 1.0 12.502032111160405 -8.774913789027508 24.999143985104826 1.0473330533636962 0.9401145072685028 0.2347082488944201 0.07335783075191468 212.58583587344395 394410.3560367866 0.01318659688144002 0.014075818673551427 1.6791373073978754e-09 8.774913789027508 -0.10721854609519343 LAIRES(ph)IESEIRR ddPTM_A549_PD325901_60min_R1 6 LAIRESIESEIRR 13 2 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 LAIRES(0.995)IES(0.005)EIRR;LAIRES(1)IESEIRR;LAIRES(0.996)IES(0.004)EIRR;LAIRES(0.996)IES(0.004)EIRR;LAIRES(1)IESEIRR;LAIRES(0.998)IES(0.002)EIRR 171.46 2.1464e-22 126481900.0 5988.48 6397.66 7060.790000000001 6790.699999999999 7352.41 7485.32 6745.38 7227.55 7984.73 7307.780000000001 7962.43 True False 6596.426081114031 6936.8132607897205 7539.977669379496 7210.14611620133 6836.002086037521 7424.362035669936 7002.0791271135695 7083.390845346713 7649.159565746541 6846.365523646461 6983.101588002464 0.9446269681150317 0.9933713799478056 1.0797462380232001 1.032513421913974 0.9789349331223145 1.063189750586701 1.0027176375528764 1.0143617067688881 1.0953813959814673 0.980419006850634 1.0 12.769652245418223 -5.52118750052829 4.9785854938754595 1.03877444488379 0.9537434855514952 0.25569353156032215 0.038175148512810717 0.14440863914828972 10.26936901996189 0.005615305924033375 0.027738339039739626 3.011705482019764e-06 5.52118750052829 -0.08503095933229465 LAKPGEGLDS(ph)PMGAK ddPTM_A549_PD325901_60min_R1 1 LAKPGEGLDSPMGAK 15 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 LAKPGEGLDS(1)PMGAK 48.288000000000004 0.006213399999999999 4131600.0 3104.0 2884.6 3190.0 2849.7 3257.3 3547.0 3459.5 2914.2 3522.9 3469.0 3583.7 True False 3419.115794955971 3127.695365504581 3406.4925830283255 3025.719496861729 3028.5184850749647 3518.1144080041004 3591.1531656110387 2856.073994854325 3374.844764214753 3249.9667479767554 3142.9276189460284 1.0878760854513607 0.9951534825843188 1.0838596989932219 0.9627073428679198 0.9635979100564109 1.1193749378116096 1.1426140213866336 0.90873043898227 1.073790164262993 1.03405714098711 1.0 11.617893332175766 -5.230074541844981 21.674618894632097 1.031831579027435 1.0878766402974989 0.05690160792336707 0.0683276922367961 5014.403321367603 3464843.7945258543 0.00899001743624482 1.2056489781813309 5.887425955272838e-06 5.230074541844981 0.05604506127006381 LAKS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 LAKSPGR 7 1 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog 1 LAKS(1)PGR;LAKS(1)PGR 49.715 0.015041999999999998 61958000.0 3623.2999999999997 4178.5 2953.9 2083.4300000000003 3300.3999999999996 3157.6000000000004 3211.9 3083.5 3404.6 4716.4 5330.3 True False 4234.824458820028 4391.167802183478 3372.8074374614143 2593.8704435287273 2814.915532013443 3491.7351361547585 3795.4606544929834 3520.595567822707 2633.4635360290117 3650.9619643179394 4006.6394012039336 1.0569517330527745 1.095972799764311 0.8418045897636651 0.647393035357589 0.7025627340378084 0.8714872456716584 0.9472927993850672 0.878690397435023 0.657274906056606 0.9112279890276328 1.0 11.968176957269643 -5.777275619498672 8.334553820882324 0.8256334089245622 1.0768510330499221 0.4289662069227518 0.11025126276188306 0.12959934957231223 52.36541694246376 0.019553346621479298 0.06423383496662152 1.670030414250196e-06 5.777275619498672 0.25121762412536 LAKS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 LAKSPGR 7 1 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog 1 LAKS(1)PGR 41.448 0.029800999999999998 55671000.0 1432.9 1625.0 1220.6 1444.7 1483.8 1083.2 1035.5 1003.8 1399.6 1446.8 1561.8 True False 1578.3669531547725 1761.9444529379964 1303.437256064068 1533.9358378482423 1379.5830068321095 1074.3787783338157 1074.9065191473424 983.7784215341334 1340.7796792401057 1355.448801087568 1369.7085010659125 1.152337852854444 1.2863645451326646 0.9516165337732283 1.1198994798196313 1.007209202365695 0.7843849822774188 0.7847702765302588 0.7182392609584836 0.9788795778055738 0.98958924474277 1.0 10.419653178714182 -6.060497392167673 1.16071615130893 0.940902580357144 1.2251037819301607 0.4465885961283339 0.1208023637496329 0.5308008172567548 1.1592841788927675 0.020047114209992948 0.12816387101028603 8.699666569869483e-07 6.060497392167673 0.28420120157301665 LALAGEGEACPLLGS(ph)PGAGR ddPTM_A549_PD325901_60min_R1 2 LALAGEGEACPLLGSPGAGR 20 0 Q96F46-2;Q96F46 Q96F46-2 IL17RA Interleukin-17 receptor A 1 LALAGEGEACPLLGS(1)PGAGR;LALAGEGEACPLLGS(1)PGAGR 129.32 4.178e-24 2056900.0 1183.2 1097.2 1519.6 909.82 1096.3 1370.9 1335.4 1427.2 1366.8 1287.8 1688.9 True False 1303.3175929741976 1189.6648946237347 1622.7291940971297 966.0175150488602 1019.2996700296817 1359.735844920447 1386.21937775892 1398.73337638326 1309.3581491750338 1206.4880882226767 1481.1760068191952 0.8799208108785491 0.8031894178319317 1.0955681071163974 0.6521963025335317 0.6881691745862218 0.9180109849608359 0.9358910564152377 0.944339747567894 0.883999027223552 0.8145474154780518 1.0 10.532527369635794 -7.499114203503638 24.311773941836947 0.9424112432285239 0.8257132616923946 0.11707082788823331 0.11615732780999324 688.9031280119018 704767.0085251606 0.016775438495631918 0.026714808153102832 3.168734092748933e-08 7.499114203503638 -0.11669798153612931 LALDGETLGEEEQEDEQPPWAS(ph)PSPTSR ddPTM_A549_PD325901_60min_R1 1 LALDGETLGEEEQEDEQPPWASPSPTSR 28 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 LALDGETLGEEEQEDEQPPWAS(0.906)PS(0.058)PT(0.018)S(0.018)R 108.8 1.9314e-15 5142800.0 319.45 362.36 383.03 555.36 607.25 439.57 430.57 335.43 628.19 717.81 326.59 True False 351.8803288333392 392.89734890253084 409.0247191465017 589.6633258859282 564.5988548987722 435.9902876589691 446.95557696694476 328.7395855102557 601.7893588895698 672.4873540977793 286.4215004245844 1.2285402049487213 1.3717453065503433 1.4280517298463042 2.058725776562951 1.9712167349930934 1.522198183490651 1.5604819341578355 1.147747585369604 2.1010620990305955 2.347894110955009 1.0 8.161995983325502 -11.108426903310882 1.457489935608919 1.0006803306282803 1.662242790727393 0.0 0.5044756979312792 0.3878738943222908 1.4759361825431974 0.24688673506161413 0.053863413687283826 7.790639288183866e-12 11.108426903310882 0.6615624600991126 LALDGETLGEEEQEDEQPPWASPS(ph)PTSR ddPTM_A549_MK2206_60min_R1 2 LALDGETLGEEEQEDEQPPWASPSPTSR 28 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 LALDGETLGEEEQEDEQPPWAS(0.143)PS(0.622)PT(0.118)S(0.118)R;LALDGETLGEEEQEDEQPPWAS(0.153)PS(0.51)PT(0.169)S(0.169)R 84.962 3.8823000000000003e-07 5670400.0 564.66 850.8100000000001 805.75 745.39 1109.97 889.02 1073.39 918.49 1208.3400000000001 1234.82 1122.17 True False 659.9608033884355 894.1125948966684 920.0174659719468 928.0105834618291 946.6948833683678 983.0955063162845 1268.41106881479 1048.688770257654 934.6529193224752 955.873304380265 843.5042186835668 0.7824036783341969 1.0599977748683755 1.0907087902983958 1.1001848750799954 1.1223356829748257 1.1654897326424447 1.503740041507277 1.2432525493403137 1.10805956700627 1.1332169812642663 1.0 9.72025147376906 -5.139910988296346 2.0174996151177105 1.1131264525517743 0.6071404551608593 0.3749654388504251 0.13013717604245117 1.1332825085826406 3.7313491095366307 0.02116776298583572 1.1715824552816871 7.24584453528819e-06 5.139910988296346 -0.505985997390915 LALDGETLGEEEQEDEQPPWASPS(ph)PTSR ddPTM_A549_PD325901_60min_R1 1 LALDGETLGEEEQEDEQPPWASPSPTSR 28 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 LALDGETLGEEEQEDEQPPWAS(0.179)PS(0.603)PT(0.109)S(0.109)R 67.947 0.00011192 8222200.0 516.36 527.81 448.12 480.85 505.78 592.2 562.61 380.7 929.12 697.57 1036.2 True False 568.7804870758588 572.2904010493561 478.5321179644685 510.55101241041564 470.2557576462761 587.3773195432843 584.0204314220052 373.1066398466277 890.072317501834 653.525311151959 908.7539690129969 0.6258905121411625 0.6297528490257095 0.5265804984425049 0.5618143411961415 0.5174731265900535 0.6463546125484748 0.6426606665127562 0.4105694748732278 0.9794425640512436 0.7191443816875505 1.0 9.827745949838993 -8.77688053964116 24.997896375707 0.9902923886638444 0.5735974917198093 0.6350905710452764 0.10521063666946545 46.71646735512381 75629.62262557287 0.010935859228071337 0.011662353296709957 1.671550340489664e-09 8.77688053964116 -0.41669489694403505 LALDMEIS(ph)AYRK ddPTM_A549_PD325901_60min_R1 3 LALDMEISAYRK 12 1 P20700;E9PBF6 P20700 LMNB1 Lamin-B1 1 LALDMEIS(0.984)AY(0.016)RK;LALDMEIS(1)AYRK;LALDMEIS(1)AYRK 102.52 8.763899999999999e-05 15514700.0 3281.7700000000004 3863.8999999999996 4139.0 3797.8 4062.3 4338.0 3740.83 4131.4 4415.4 4240.1 4420.4 True False 3614.9328744886157 4189.524413358229 4419.897429828919 4032.3814805704 3776.9780621742 4302.672766259314 3883.1893327107223 4048.995985979398 4229.836092967108 3972.3793623800075 3876.718823224328 0.9324722888935286 1.0806882326002007 1.1401129747534335 1.0401531977025367 0.9742718609220228 1.1098748613087996 1.0016690685555092 1.0444389109994272 1.091086634302017 1.024675645440831 1.0 11.920620385484888 -7.85860021646528 17.495818708812198 1.0414273360504451 1.0491358332091807 0.0016841574374150126 0.059016207642187714 18.464449814677895 3268.177743918731 0.009694256427689552 0.013394657406355225 1.3848405874760934e-08 7.85860021646528 0.007708497158735561 LALEANTISTASVRPAQEEQS(ph)MTPPGK ddPTM_A549_PD325901_60min_R1 1 LALEANTISTASVRPAQEEQSMTPPGK 27 1 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 LALEANT(0.001)IS(0.005)T(0.004)AS(0.004)VRPAQEEQS(0.493)MT(0.493)PPGK 62.677 0.00013321 3436600.0 1139.6 1573.4 1377.0 1429.3 1427.0 1311.8 1851.1 1335.5 1730.7 1527.3 1142.5 True False 1255.2913530708208 1705.9959398477808 1470.4515005736691 1517.5846148241799 1326.7724428827469 1301.1171357259038 1921.5446234607862 1308.8624048205183 1657.9646976713727 1430.8660173493513 1001.9797429042159 1.2528111091671243 1.7026251797296719 1.4675461365232778 1.514586123692975 1.3241509644068519 1.2985463478080355 1.9177479755141875 1.306276313557807 1.6546888391833143 1.4280388675344056 1.0 9.968637626421707 -10.87285802253565 1.0438970223665949 0.990905166702358 1.506876721024459 0.08206314275384996 0.22922502232597175 0.35702289596249487 0.6703549122476716 0.13914958087881982 0.0312702773090965 1.3401147196844973e-11 10.87285802253565 0.515971554322101 LALLEEAR ddPTM_A549_MK2206_60min_R1 2 LALLEEAR 8 0 Q5TZA2;Q5TZA2-2;B1AKD8 Q5TZA2 CROCC Rootletin 0 ; 112.17 0.0040425 6623300.0 1103.78 1004.5799999999999 1017.78 1142.62 1540.72 1026.67 1394.92 1048.08 1591.9 1543.12 1549.41 False True 1290.0710791699205 1055.7088310918946 1162.1165082431621 1422.5619512941603 1314.082128979443 1135.3115379516094 1648.3589078630569 1196.6485496103846 1231.3371917419329 1194.5281202566148 1164.6487354594265 1.1076911345814648 0.9064611491424858 0.9978257588411278 1.2214515054901882 1.1283076939598176 0.9748102611417474 1.415327091917391 1.0274759360283297 1.0572605750146626 1.025655276039433 1.0 10.185679180292707 -9.248995429901148 1.4491720649216704 1.0173027681850972 1.0970471403420805 0.06016838677205483 0.12943542288632867 0.7927827350622263 3.4464456537511676 0.02867212863388654 0.02528846790934449 5.636435870395989e-10 9.248995429901148 0.07974437215698327 LALLEEAR ddPTM_A549_PD325901_60min_R1 4 LALLEEAR 8 0 Q5TZA2;Q5TZA2-2;B1AKD8 Q5TZA2 CROCC Rootletin 0 ;;; 112.17 0.0040425 12391900.0 3305.26 3210.8 3503.48 3490.2699999999995 3837.0999999999995 3193.46 3374.4199999999996 3374.56 3025.6000000000004 3694.32 3905.5299999999997 False True 3640.80756199619 3481.3853843035813 3741.247220936703 3705.856050921706 3567.595333276374 3167.4535205482875 3502.835399653474 3307.2517535088928 2898.444553807422 3461.060004723404 3425.1745691944875 1.0629553292673237 1.016411080362048 1.0922792825174301 1.0819466208384314 1.0415805855160778 0.924756813575546 1.0226735393744473 0.9655717355996465 0.8462180526141946 1.0104769654229202 1.0 11.741961803740539 -7.380310478833864 1.2197907147641471 0.9315752939761635 1.0645473706153057 0.38252945742390965 0.053990627573005524 0.31319421258139174 0.9215578586688921 0.010728927471187547 0.02113287150071386 4.1657146841091356e-08 7.380310478833864 0.13297207663914223 LALPGFS(ph)TPRDK ddPTM_A549_PD325901_60min_R1 1 LALPGFSTPRDK 12 1 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5;H0YBM4 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 LALPGFS(0.5)T(0.5)PRDK 70.96300000000001 0.00077081 2758000.0 1383.0 1194.1 1285.4 1526.5 1585.0 1579.3 1407.6 1334.7 1468.5 1379.0 1730.8 True False 1523.4011418892112 1294.7309976943138 1372.6349737381233 1620.7884380669632 1473.6750679531563 1566.4387044152468 1461.1669882682745 1308.0783614481059 1406.7840518463104 1291.9297046583883 1517.9225724451794 1.003609254874711 0.852962477268302 0.9042852373734608 1.0677675314203148 0.9708499594806433 1.0319621915180524 0.9626096974857691 0.8617556555213213 0.9267824837601307 0.8511169990556597 1.0 10.567882487010804 -4.964629903669832 0.00409819834004874 1.8861251351034 4.217511267709244e-08 0.0 0.07435809696151277 128794.92229504825 71.37862322711904 15868.178383238075 16998.663490751733 1.084851006698269e-05 4.964629903669832 -1.8861250929282873 LALS(ph)PLSLGKENLAESSKPTAGGSR ddPTM_A549_MK2206_60min_R1 2 LALSPLSLGKENLAESSKPTAGGSR 25 2 P49454 P49454 CENPF Centromere protein F 1 LALS(0.901)PLS(0.099)LGKENLAESSKPTAGGSR;LALS(0.922)PLS(0.078)LGKENLAESSKPTAGGSR 81.697 5.822100000000001e-07 18223000.0 3332.5 4277.700000000001 4466.0 3854.4 5403.2 3542.1 4181.6 3588.5 5955.5 6032.7 6319.9 True False 3894.944528197432 4495.416658466024 5099.345954738707 4798.728173030591 4608.396437575761 3916.922670944314 4941.342592492873 4097.180864320346 4606.588758979261 4669.908880107885 4750.494409633366 0.819902981108452 0.9463050097164459 1.0734347869977319 1.0101534196734163 0.9700877509150524 0.8245294769742956 1.040174383212091 0.8624746207493292 0.9697072266073435 0.9830363910413064 1.0 12.213861954991433 -9.463529510802182 1.787136475259083 0.9913915327676811 0.9495310293044468 0.046240934291430835 0.0787288931287948 0.785357214412189 5.095590729070951 0.017259478989900334 0.014343079091270304 3.439303401302481e-10 9.463529510802182 -0.04186050346323433 LALS(ph)PLSLGKENLAESSKPTAGGSR ddPTM_A549_PD325901_60min_R1 1 LALSPLSLGKENLAESSKPTAGGSR 25 2 P49454 P49454 CENPF Centromere protein F 1 LALS(0.871)PLS(0.129)LGKENLAESSKPTAGGSR 65.28399999999999 5.0841e-05 11736000.0 2808.6 2295.0 2943.3 3345.5 4253.8 4351.0 3569.3 3840.8 4618.4 3271.6 3487.2 True False 3093.7270044179586 2488.4077043032016 3143.050037500714 3552.1439368182305 3955.027762813337 4315.56689856945 3705.1316646959035 3764.19223095069 4424.304708918625 3065.0306176652507 3058.29650718213 1.011585043226719 0.813658093144142 1.0277126596847455 1.1614779431871125 1.293212660553127 1.4111015359154142 1.2115017808099182 1.2308133701591157 1.4466565614316824 1.0022019155001178 1.0 11.57851256994291 -6.206504403138535 2.510369218969737 1.2365151598255604 0.9137901428858101 0.4373325623435259 0.13915641615291613 0.23684851860792008 2.8970693330741497 0.024367561255561093 0.07544980563644388 6.215779457896983e-07 6.206504403138535 -0.3227250169397503 LALS(ph)PSPR ddPTM_A549_MK2206_60min_R1 2 LALSPSPR 8 0 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2 Q9NVH2-4 INTS7 Integrator complex subunit 7 1 LALS(0.911)PS(0.089)PR;LALS(0.917)PS(0.083)PR 99.44200000000001 0.0024096 4211300.0 1337.52 1375.1100000000001 1190.76 979.55 1633.71 1426.44 1368.23 1075.22 1617.21 2106.6000000000004 1740.27 True False 1563.2606767755813 1445.0972254303035 1359.6276733239292 1219.539793973671 1393.3934231625508 1577.3849340057607 1616.8196803440144 1227.6357277231498 1250.9145171536977 1630.7175969027599 1308.1129299914014 1.1950502444661693 1.1047190133957339 1.0393809602760111 0.932289381148222 1.0651935251276126 1.2058476740353978 1.235993959905772 0.9384783985976037 0.9562741017795156 1.2466183610871264 1.0 10.353271379401544 -8.29522955730608 24.994748909698345 0.975709221122968 1.1031867630848142 0.0 0.11563442621236246 560.5113589828017 414611.143464041 0.014509524492559465 0.01754162441304486 5.067227963560201e-09 8.29522955730608 0.12747754196184624 LALS(ph)PSPR ddPTM_A549_PD325901_60min_R1 2 LALSPSPR 8 0 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2 Q9NVH2-4 INTS7 Integrator complex subunit 7 1 LALS(0.931)PS(0.069)PR;LALS(0.5)PS(0.5)PR 114.89 0.001317 5934000.0 1392.25 1771.43 1368.1100000000001 1912.8 1982.81 1861.7199999999998 1861.12 1666.5900000000001 1905.7800000000002 1774.4299999999998 1873.95 True False 1533.5901950797204 1920.714622934125 1460.9581717137569 2030.9493117160107 1843.544265923153 1846.5587695712986 1931.9459400439405 1633.3485550354371 1825.6866941284718 1662.3921869738813 1643.466029947795 0.9331438357313873 1.168697489290446 0.8889494185408654 1.2357720054490717 1.121741631606291 1.1235758670533367 1.1755314103482315 0.9938438186564287 1.1108758324542096 1.0115160013539723 1.0 10.682525921224912 -2.5561738868400017 16.66866464676995 1.0680532698784426 0.16743694809806964 0.0 0.10497742294018504 0.0 0.0 0.01263197178960615 0.0 0.002778600523241206 2.5561738868400017 -0.900616321780373 LALSPEDKPIRLS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 LALSPEDKPIRLSPSK 16 2 H9KVB4;O15417;O15417-2;O15417-3 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 LALS(0.002)PEDKPIRLS(0.904)PS(0.095)K 65.95100000000001 0.00054652 5054900.0 742.9 1039.0 864.44 779.84 1749.3 1121.9 1195.9 892.01 1352.1 1777.9 1274.7 True False 868.2833578388205 1091.8806620721875 987.0305904868628 970.9008350083479 1491.9802872836967 1240.6187133430517 1413.1795500196652 1018.4551491660557 1045.8515088600209 1376.2711551948244 958.1568100697241 0.9062017288961672 1.1395636398939046 1.0301347129339273 1.0133005629190242 1.557135817022609 1.294797156691683 1.474893811918771 1.0629315978998717 1.091524370404376 1.4363736089238615 1.0 9.904117973707825 -8.486428395506675 24.904483105698507 1.045009669854836 1.2078871320569353 0.0 0.2181154451277828 845.2032606717161 577481.1440362355 0.031205856398561813 0.03771972133989875 3.262658391833605e-09 8.486428395506675 0.16287746220209942 LALSPEDKPIRLS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 LALSPEDKPIRLSPSK 16 2 H9KVB4;O15417;O15417-2;O15417-3 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 LALSPEDKPIRLS(0.965)PS(0.035)K;LALSPEDKPIRLS(0.835)PS(0.165)K 87.49 2.7299e-06 18678600.0 4369.6 4655.6 4445.9 5372.5 5914.1 5243.200000000001 4982.9 5033.299999999999 5432.799999999999 5091.200000000001 5958.3 True False 4813.198575270496 5047.943750829624 4747.625509368537 5704.347123167222 5498.714018537393 5200.501117577418 5172.526986247502 4932.906882952533 5204.478309070914 4769.740763130372 5225.466872775659 0.921104026196577 0.9660273184639407 0.9085552784007407 1.0916435338795272 1.052291432022148 0.9952222919394417 0.9898688695542267 0.9440126601228027 0.9959834089057011 0.9127874846897241 1.0 12.351344226151811 -6.20265846003796 24.999977443810554 1.002289758583441 0.9353086974538344 0.27826287100778946 0.04671145958183183 215.17958890532998 91517.17007017383 0.005352578925576402 0.014161588037446528 6.271068431912278e-07 6.20265846003796 -0.06698106112960656 LANPAGGRPGS(ph)KGEPGR ddPTM_A549_PD325901_60min_R1 1 LANPAGGRPGSKGEPGR 17 2 P29353;P29353-6 P29353 SHC1 SHC-transforming protein 1 1 LANPAGGRPGS(1)KGEPGR 41.257 0.01884 8333500.0 1969.4 1720.6 1690.9 1806.3 2289.8 1866.6 1498.8 1849.6 1718.3 2033.5 1980.4 True False 2169.332038204347 1865.6010004462257 1805.654642207712 1917.871048595059 2128.972347381159 1851.3990284692582 1555.8376541748305 1812.7082770168697 1646.0858265492097 1905.1044629607188 1736.823354789943 1.24902283943937 1.0741455055294655 1.0396305630206668 1.1042407066359448 1.2257851908253754 1.0659685242965726 0.8957949867981816 1.0436917905425704 0.947756616704577 1.0968901688860166 1.0 10.762235315551074 -7.535407184585169 12.274683339065527 0.9757166192310206 1.129415291705692 0.43260338309337154 0.07532086199594337 0.32870424619773847 319.3038733949633 0.009752221149636572 0.014544845094231712 2.9146929829616176e-08 7.535407184585169 0.1536986724746715 LANQDEGPEDEEDEVPKKQNS(ph)PVAPTAQPK ddPTM_A549_MK2206_60min_R1 1 LANQDEGPEDEEDEVPKKQNSPVAPTAQPK 30 2 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 LANQDEGPEDEEDEVPKKQNS(1)PVAPTAQPK 96.368 2.9272000000000005e-10 22771000.0 1701.7 2039.0 2319.2 1914.9 2582.0 1955.8 2088.6 1984.1 2657.2 3318.8 2876.0 True False 1988.9053574294267 2142.776390726843 2648.097433549039 2384.050585963128 2202.1912203547176 2162.761457845033 2468.0715847236975 2265.3522510514113 2055.348442676464 2569.080774993297 2161.809826438006 0.9200186497008054 0.9911956012603921 1.2249446742095185 1.10280310358812 1.0186794385994848 1.000440201258866 1.141669148941892 1.0478961763181598 0.9507535850473223 1.1883935134231245 1.0 11.078023900000042 -8.67532793544725 6.289701503612929 0.9768461261093947 1.0613929457515698 0.0 0.10063379561970083 0.26374641995339004 15.697558553428706 0.013519466497272032 0.015304372789810472 2.1118937481782337e-09 8.67532793544725 0.08454681964217514 LANQDEGPEDEEDEVPKKQNS(ph)PVAPTAQPK ddPTM_A549_PD325901_60min_R1 2 LANQDEGPEDEEDEVPKKQNSPVAPTAQPK 30 2 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 LANQDEGPEDEEDEVPKKQNS(0.999)PVAPT(0.001)AQPK;LANQDEGPEDEEDEVPKKQNS(1)PVAPTAQPK 183.27 3.3738e-67 76615000.0 6795.200000000001 5822.799999999999 6431.1 7710.200000000001 7676.0 9889.5 8944.7 8823.4 9636.2 10244.400000000001 8749.3 True False 7485.043701638157 6313.507791118378 6867.5531193459165 8186.44154286532 7136.864240762419 9808.96319085327 9285.095453227648 8647.410365176607 9231.224024788165 9597.566835679758 7673.1915663823675 0.9754798426291713 0.8228007520076771 0.8950060818804397 1.0668887218626983 0.9301037487491262 1.2783420179196492 1.2100695483620298 1.1269639615231903 1.203048815467063 1.250792027365565 1.0 12.905611057863187 -6.614502263937524 1.5242248834370946 1.1180812644123779 0.8918909247974757 0.5225849435227019 0.10244105525114622 0.29215532584853593 1.3451315042303005 0.016575616020522436 0.0471867629916137 2.4293927777844366e-07 6.614502263937524 -0.2261903396149022 LANYTNLSQGVVEHEEDEES(ph)RRR ddPTM_A549_MK2206_60min_R1 1 LANYTNLSQGVVEHEEDEESRRR 23 2 A0A0G2JNW7;Q9Y666;Q9Y666-2 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 LANYTNLS(0.002)QGVVEHEEDEES(0.998)RRR 65.581 0.00013004 2529500.0 807.95 714.32 776.97 914.7 1243.2 730.18 878.83 823.34 1181.5 1461.0 1466.1 True False 944.312207519014 750.6758368925937 887.1560292103297 1138.8015410624434 1060.3269268570814 807.4471629457431 1038.502035240222 940.0509663730008 913.8921364678024 1130.9590852914318 1102.0269076984573 0.8568867065970062 0.6811774119566214 0.8050221124483453 1.0333699958749543 0.9621606509332292 0.7326927839103918 0.942356332668043 0.8530199760151617 0.8292829604101342 1.0262536036015657 1.0 10.105943734641214 -10.813049447813153 0.8378314123877733 1.0094076176953728 0.8539285092398736 0.2849735272116294 0.0955573724042508 0.8796382529724417 0.9843048799880101 0.09164906876088269 0.017946962394220063 1.537979519373187e-11 10.813049447813153 -0.15547910845549917 LAPEFAK ddPTM_A549_PD325901_60min_R1 1 LAPEFAK 7 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 94.262 0.033362 4559800.0 4137.3 3977.5 3814.0 4766.6 5148.0 4869.7 4696.0 4653.5 5127.9 4045.1 5023.4 False True 4557.31565028072 4312.697884037466 4072.8409754451513 5061.022056265959 4786.4222396358655 4830.042777743892 4874.708849749801 4560.68229189987 4912.392195752602 3789.6916956589134 4405.553645956268 1.034447884765573 0.9789230209456121 0.9244788062411851 1.1487823013825575 1.0864519250671674 1.096353186432595 1.1064917695927177 1.0352120660444095 1.1150453701231278 0.860207819540993 1.0 12.105107618696412 -6.251015553797944 24.990762917518033 1.068128560549099 0.9792472201264619 0.14997624262635867 0.0776432166347913 634.1637813308366 1520382.5886485167 0.007693009038137958 0.020144802239704832 5.610278830518829e-07 6.251015553797944 -0.08888134042263718 LAPGGHVGR ddPTM_A549_MK2206_60min_R1 4 LAPGGHVGR 9 0 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ;;; 119.41 0.00016446 15172900.0 720.7249999999999 1154.95 821.14 956.8499999999999 1143.19 1064.33 1115.12 1137.96 1099.94 1515.03 1562.56 False True 842.3657599655188 1213.7320218096954 937.5899993896423 1191.278292954629 975.0282653746352 1176.956694154925 1317.7228696529216 1299.269314856341 850.8053462432449 1172.783670765967 1174.53322753789 0.7171919365204543 1.0333739338766734 0.798266049360784 1.0142567830557172 0.8301410658415631 1.0020633444505567 1.1219119551136005 1.1062005606941647 0.7243774175948532 0.9985104237743954 1.0 10.197871812423484 -3.7465636775272335 16.555036352323626 0.9090474134322599 0.5048460688861136 0.0 0.14303368709000835 0.0 0.0 0.020005251741025125 0.0 0.00017924057253275897 3.7465636775272335 -0.4042013445461463 LAPGGHVGR ddPTM_A549_PD325901_60min_R1 2 LAPGGHVGR 9 0 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ; 159.2 1.0596e-05 24886000.0 1219.07 1421.9699999999998 1393.98 1181.64 1429.7 1546.83 1250.79 1134.93 1162.8899999999999 1314.31 1511.73 False True 1342.8290889680977 1541.8044023041482 1488.5838654827041 1254.6272191008504 1329.2828041972414 1534.2331293298528 1298.3894979085503 1112.2929308146395 1114.0177773589082 1231.3242422984515 1325.796793646031 1.012846837014311 1.1629266337747595 1.1227843306129877 0.9463193945812319 1.0026293701779319 1.1572158996633322 0.9793276798761078 0.8389618500703706 0.8402628386928618 0.9287428120204051 1.0 10.372643953578011 -7.994267054593302 23.477257933747342 0.9157120481245711 1.0660571536183754 0.5174874280875574 0.07444373956562657 55.79810084795877 228497.32491114704 0.0136891409800612 0.01887683052286353 1.0132881071301006e-08 7.994267054593302 0.1503451054938043 LAPGT(ph)RR ddPTM_A549_MK2206_60min_R1 1 LAPGTRR 7 1 Q68CZ2;E9PCX8;C9JHU5 Q68CZ2 TNS3 Tensin-3 1 LAPGT(1)RR 53.968 0.026927999999999997 3533100.0 340.67 354.35 312.77 348.3 623.51 376.11 365.45 354.48 539.18 583.85 575.9 True False 398.16676741815996 372.38490144877727 357.1254890872427 433.6335156357812 531.7925049587024 415.90971055838764 431.8475345385786 404.7286255494705 417.0565908935334 451.9578794985644 432.8881359685844 0.9197913602489115 0.8602335580659157 0.8249833141954255 1.001721875942682 1.2284755824245912 0.9607787231862854 0.9975961424129182 0.934949683118233 0.9634280920182116 1.0440523589017094 1.0 8.757850451369494 -6.272242483465682 24.20809791334396 0.9970370003836553 0.867525826248024 0.401915812914171 0.07786882328110767 374.81280420020835 839898.9392459905 0.010965080851252555 0.025727285254349832 5.342659746745098e-07 6.272242483465682 -0.1295111741356313 LAPGT(ph)RR ddPTM_A549_PD325901_60min_R1 2 LAPGTRR 7 1 Q68CZ2;E9PCX8;C9JHU5 Q68CZ2 TNS3 Tensin-3 1 LAPGT(1)RR;LAPGT(1)RR 79.906 0.009947200000000002 58109000.0 2696.62 3062.9 3234.8999999999996 3446.6000000000004 3625.8 3333.8999999999996 3239.6 3297.2 3320.5 3666.8 3441.6 True False 2970.3788772532794 3321.0213322484847 3454.4397670339617 3659.488654203472 3371.13631633095 3306.7498237510213 3362.88475077714 3231.43475939664 3180.950932349796 3435.2776222199964 3018.305018099911 0.9841215050966577 1.1002934800602557 1.144496578814492 1.2124316900573553 1.1168971645063075 1.0955651612151154 1.1141633236571131 1.0706123933859073 1.0538865069217802 1.1381479345591714 1.0 11.559522891011973 -8.994639533863444 0.7316629190612476 1.0109299893404675 1.1167850262232968 0.0 0.06388632941659837 0.4293135571201609 0.4922012119536467 0.015418318380775481 0.01360042717284168 1.0124194177435512e-09 8.994639533863444 0.10585503688282927 LAPLGPLNPSYKS(ph)SPTR ddPTM_A549_PD325901_60min_R1 2 LAPLGPLNPSYKSSPTR 17 1 Q96T17-2;Q96T17 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 LAPLGPLNPS(0.025)YKS(0.548)S(0.408)PT(0.019)R;LAPLGPLNPS(0.218)YKS(0.382)S(0.382)PT(0.018)R 74.047 0.00014929 9254900.0 7385.1 7055.0 7014.0 8197.4 9044.1 9846.9 9211.1 9418.5 8951.1 8668.7 8811.3 True False 8134.829915376724 7649.549609524652 7490.012218608362 8703.73478035383 8408.873616451194 9766.710111129285 9561.633451007321 9230.64062882968 8574.916395288741 8121.3568025904015 7727.565959432747 1.0527027472922241 0.9899041495966963 0.9692589177405322 1.126322936102475 1.0881658805107708 1.2638792295531858 1.2373409041349945 1.1945081643155937 1.1096529541519689 1.050959234152763 1.0 12.915798348069805 -6.263259405176639 24.887834414350404 1.0980053342468694 1.0025501580847993 0.26686889541341285 0.08139556052827837 226.0695548532337 3091408.217093738 0.014334797188298064 0.034960248374279856 5.45431975896099e-07 6.263259405176639 -0.09545517616207011 LAPS(ph)EDELTCFSK ddPTM_A549_MK2206_60min_R1 2 LAPSEDELTCFSK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LAPS(0.994)EDELT(0.006)CFSK;LAPS(0.997)EDELT(0.003)CFSK 131.35 2.8800000000000002e-21 6363100.0 1369.7 1494.1 1348.1 1200.5 1853.8 1430.2 1528.6 1548.0 2234.6 1932.4 1899.5 True False 1600.8718740501176 1570.1433081829218 1539.2808512277768 1494.6225538924932 1581.1084757140106 1581.5428147100747 1806.326833481109 1767.4337405511749 1728.4666679229365 1495.8694978899139 1427.8017264669663 1.1212144126001347 1.0996928208429706 1.0780774547994565 1.0467997945281045 1.107372575901274 1.1076767770995306 1.265110414140475 1.2378705724951133 1.2105789171441559 1.0476731258697791 1.0 10.479579936225768 -7.190832920189486 3.4837099979960717 1.1276936021089639 1.0865715701755847 0.09180746479142499 0.07636200129581443 0.8373032977354702 19.986238864176677 0.01520035367607259 0.02696187172028724 6.444171350805971e-08 7.190832920189486 -0.041122031933379155 LAPS(ph)EDELTCFSK ddPTM_A549_PD325901_60min_R1 2 LAPSEDELTCFSK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LAPS(1)EDELTCFSK;LAPS(1)EDELTCFSK 151.74 2.5436e-34 10690000.0 2947.3 3191.7 3223.0 3274.9 3517.4 2937.2 2999.4 2973.8 3012.5 3481.0 3799.9 True False 3246.5077263124153 3460.6757602721254 3441.7321614734474 3477.1831351624637 3270.349958371249 2913.2804170255577 3113.543808334658 2914.4852260990315 2885.8951012509433 3261.209065928825 3332.536389550748 0.9741852291521624 1.0384510042030333 1.0327665655100078 1.0434044009437553 0.9813396092614364 0.874193129941573 0.9342865146490983 0.8745546590991394 0.8659755705293242 0.9785966857419557 1.0 11.702404913536057 -7.016950043735015 5.895357217033698 0.925898802010011 1.0231318938082232 0.5473329576925907 0.04305389936691382 0.13125563223283612 16.546611899106818 0.008155659147257686 0.01477445257755419 9.617228976127873e-08 7.016950043735015 0.09723309179821227 LAPVPS(ph)PEPQKPAPVS(ph)PESVK ddPTM_A549_MK2206_60min_R1 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 LAPVPS(1)PEPQKPAPVS(0.54)PES(0.46)VK;LAPVPS(1)PEPQKPAPVS(0.645)PES(0.355)VK 112.8 2.5741000000000002e-11 92051000.0 6238.3 7408.8 6502.1 5815.700000000001 9058.400000000001 6841.2 6810.700000000001 7047.700000000001 10590.1 9989.5 10200.3 True False 7291.172528208257 7785.876274456611 7424.195551344952 7240.546761076695 7725.921359589917 7565.131243178973 8048.116030871251 8046.733057676046 8191.45925891466 7732.865011990936 7667.283996041582 0.950945932350034 1.0154673126072093 0.9682953644573319 0.9443431030877165 1.0076477359621228 0.9866768006877862 1.0496697442048948 1.049489370920702 1.0683651816136843 1.00855335683186 1.0 12.904499902890059 -7.68232039029001 5.445467546344905 1.03582137587567 0.9791222975165292 0.5281901975782588 0.02654263050078267 0.15287264487850197 7.791196522154849 0.004832670635013881 0.007177413177127714 2.078163006769e-08 7.68232039029001 -0.05669907835914079 LAPVPS(ph)PEPQKPAPVS(ph)PESVK ddPTM_A549_PD325901_60min_R1 4 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 LAPVPS(1)PEPQKPAPVS(0.954)PES(0.046)VK;LAPVPS(1)PEPQKPAPVS(0.925)PES(0.075)VK;LAPVPS(1)PEPQKPAPVS(0.983)PES(0.017)VK;LAPVPS(1)PEPQKPAPVS(0.995)PES(0.005)VK 153.27 2.8846e-23 307167000.0 27076.3 29378.800000000003 31481.6 27174.899999999998 32858.7 31457.5 32687.1 32116.6 31941.0 32140.699999999997 33151.7 True False 29825.066043481445 31854.65458090757 33618.1306902397 28853.43185432424 30550.81826836111 31201.320549700875 33931.02547756745 31476.0092180147 30598.630847819553 30111.33071683382 29074.251065941073 1.0258240522116118 1.0956311310877958 1.156285354143534 0.992404990549335 1.0507860786876728 1.0731599063011308 1.167047274944799 1.0826077392888431 1.0524305777789822 1.0356700383628328 1.0 14.827454408827688 -9.651362698699458 0.969769933726913 1.0089797944328207 1.0807339582473847 0.17993138972594613 0.049060793060686496 0.4651348523130983 0.9120967592080393 0.015233924253091632 0.009945045427696208 2.231707645712481e-10 9.651362698699458 0.07175416381456401 LAPVPS(ph)PEPQKPAPVSPESVK ddPTM_A549_MK2206_60min_R1 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LAPVPS(1)PEPQKPAPVSPESVK;LAPVPS(1)PEPQKPAPVSPESVK 133.95 3.3237000000000003e-18 80349000.0 4154.3 5117.3 5487.4 4203.5 6016.3 4986.3 4621.6 4670.9 7037.3 6045.6 6440.1 True False 4855.444277116456 5377.748712244469 6265.595833415402 5233.357688702286 5131.310239744415 5513.946956361941 5461.284897040626 5333.01437903132 5443.3627862588755 4679.894761148446 4840.8454322821335 1.0030157634732493 1.1109110562344937 1.2943185071830716 1.0810834103073417 1.06000290889795 1.1390462747666137 1.1281675842448862 1.101670039589998 1.1244653154919462 0.9667515368162024 1.0 12.241043314485706 -10.736399976833738 0.643337417197973 0.984617214673006 1.1209823361983717 0.3499086419984272 0.06840285684505416 1.0512836027801056 0.6343769128643949 0.08170149328220953 0.013865537072403811 1.8348477056305153e-11 10.736399976833738 0.13636512152536573 LAPVPS(ph)PEPQKPAPVSPESVK ddPTM_A549_PD325901_60min_R1 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LAPVPS(1)PEPQKPAPVSPESVK;LAPVPS(1)PEPQKPAPVSPESVK 184.45 6.1039e-45 201690000.0 15909.0 15672.900000000001 16647.1 16516.8 19106.8 18397.300000000003 18220.2 19991.0 18294.3 18457.4 19898.8 True False 17524.06996841319 16993.710287047328 17776.872313144468 17537.00522362556 17764.804282881625 18247.47848840538 18913.579681476018 19592.26382236388 17525.454191141947 17291.996614040414 17451.37374888614 1.0041656445259326 0.9737749320813197 1.0186517444954213 1.0049068615440595 1.0179602212700012 1.045618456803153 1.0837874400966976 1.122677452462124 1.00424496336631 0.9908673588028623 1.0 14.091052987485645 -5.822868520851045 9.074815608334474 1.0205639590213598 0.9890381317840325 0.09631266283062367 0.03970351359805385 0.6073157175036783 83.45280253764108 0.006152053021755238 0.01925675515654064 1.5035970990779745e-06 5.822868520851045 -0.03152582723732722 LAPVPSPEPQKPAPVS(ph)PESVK ddPTM_A549_MK2206_60min_R1 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LAPVPS(0.088)PEPQKPAPVS(0.902)PES(0.01)VK;LAPVPSPEPQKPAPVS(0.998)PES(0.002)VK 171.73 1.1989e-35 86254000.0 7548.0 7811.9 8974.2 8797.5 11859.9 8785.1 8365.2 8866.4 13215.400000000001 12106.7 12172.5 True False 8821.917869117544 8209.492342677308 10246.87650403407 10952.887894934782 10115.324420714527 9714.733450922586 9885.04855909733 10123.239352211196 10222.133000657295 9371.78806153168 9149.732306090624 0.9641722373937797 0.8972385276466028 1.1199099778266868 1.1970719501426141 1.105532280324873 1.0617505655827617 1.0803647831879446 1.106397325468478 1.1172056906902965 1.024269098593545 1.0 13.159513819717235 -5.75942017621483 24.999998522236762 1.0778983350916143 0.9307053499724471 0.5688199612710315 0.05269068264509081 34.508168377597265 427215.714226595 0.008743524599821561 0.030809923735548885 1.7401225050040781e-06 5.75942017621483 -0.14719298511916712 LAPVPSPEPQKPAPVS(ph)PESVK ddPTM_A549_PD325901_60min_R1 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LAPVPSPEPQKPAPVS(0.999)PES(0.001)VK;LAPVPS(0.023)PEPQKPAPVS(0.965)PES(0.012)VK 158.67 4.472e-28 51962000.0 6144.8 5964.299999999999 7030.299999999999 7223.6 6840.6 6687.9 6931.8 7131.299999999999 7519.5 6655.3 6933.9 True False 6768.61557243733 6466.932492712666 7507.418434628226 7669.785366014095 6360.139854788873 6633.435959766174 7195.593442226504 6989.060627103378 7203.4815647656305 6235.083222199399 6081.074257613603 1.1130624764140833 1.063452314303836 1.2345546389651167 1.2612550087530012 1.045890838584297 1.0908329151647846 1.183276693787698 1.1493134816357424 1.1845738531718728 1.0253259470385474 1.0 12.570110491428112 -10.82292805845081 0.9916346554361295 0.9971343821768256 1.1494199756018197 0.39225568385964815 0.0643588558875482 0.455970447960377 0.7712928171576243 0.05031672383780637 0.011533602875891743 1.5033909844942103e-11 10.82292805845081 0.15228559342499415 LAQFEPS(ph)QR ddPTM_A549_MK2206_60min_R1 2 LAQFEPSQR 9 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 LAQFEPS(1)QR;LAQFEPS(1)QR 74.53 0.0021452 7898300.0 3509.8 4046.4 3325.2 3388.2 4898.0 3572.4 3597.8999999999996 3635.5 5504.4 5343.7 5873.700000000001 True False 4102.168433628609 4252.344476428203 3796.7633606576696 4218.309152102076 4177.510688341368 3950.428996832802 4251.591858028055 4150.843258251807 4257.662188720585 4136.554458639168 4415.098184126886 0.9291228105360558 0.9631370128338679 0.8599499268912644 0.9554281640366904 0.9461874943937397 0.8947545064876117 0.9629665481309867 0.9401474407012906 0.964341450894045 0.9369110914703697 1.0 12.108229805928335 -9.167326031450346 0.49634563121419206 0.9988149871803447 0.9241662814225271 0.10896264135093725 0.033794972841710326 0.49491822032223515 0.28947091421137955 0.013388733544843679 0.009232119631881837 6.802584866011723e-10 9.167326031450346 -0.07464870575781757 LAQFEPS(ph)QR ddPTM_A549_PD325901_60min_R1 1 LAQFEPSQR 9 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 LAQFEPS(1)QR 64.82 0.006101 3517500.0 2581.8 2459.4 2248.2 2528.8 2777.2 2883.1 2491.0 2706.0 2665.3 3182.9 3406.8 True False 2843.902435379296 2666.662269265052 2400.7763715248548 2684.9982326785052 2582.139052819878 2859.620989488757 2585.796368127503 2652.026707184065 2553.2867098304214 2981.9311508028863 2987.785197484536 0.9518430032298248 0.8925214140260677 0.8035304457449306 0.8986583891435863 0.8642318246284311 0.9571039417078301 0.8654559137331981 0.8876229487370271 0.8545750584680833 0.9980406735107402 1.0 11.54486071603446 -10.836177585393862 0.9944020670570958 1.0025322233071468 0.8832881188243157 0.5273454258328368 0.0410000434075143 0.35712440758042885 0.6048186586395006 0.031064118969723747 0.007006563170933787 1.458217865072028e-11 10.836177585393862 -0.11924410448283107 LAQGS(ph)PAVAR ddPTM_A549_MK2206_60min_R1 1 LAQGSPAVAR 10 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 LAQGS(1)PAVAR 69.815 0.0034198 5723600.0 1981.1 2003.0 1501.8 1702.5 2075.6 2260.7 1737.9 1499.8 2563.3 2945.8 2862.8 True False 2315.4612467552683 2104.9441444952754 1714.7778223973569 2119.6125764281296 1770.281989530693 2499.925773468793 2053.6539342580286 1712.4012429448667 1982.7166427489772 2280.3417340530473 2151.8877507394727 1.0760139537759743 0.9781849186938001 0.7968714082823755 0.9850014600899828 0.8226646528948152 1.161736141957089 0.9543499346340499 0.7957669921939091 0.921384789735263 1.0596936263378203 1.0 11.071387108990118 -5.317802655825783 4.418838434131179 0.9460506474667175 1.0794165625482932 0.11140216917063428 0.10657814960203801 0.2927592142900099 11.008071084223806 0.013238622163173168 0.1013776340174964 4.810578923425351e-06 5.317802655825783 0.1333659150815757 LAQT(ph)TPVDSALGSSR ddPTM_A549_MK2206_60min_R1 1 LAQTTPVDSALGSSR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 LAQT(0.685)T(0.312)PVDS(0.003)ALGSSR 116.06 1.0258e-06 6449000.0 4134.9 3412.7 3379.6 3568.3 4822.4 4085.1 3346.4 3785.0 5736.7 4789.1 6317.4 True False 4832.7700314009135 3586.391853179743 3858.878098664338 4442.533660187075 4113.031348194652 4517.382570530087 3954.3975634967846 4321.5353410763555 4437.346609627455 3707.2389838256 4748.615228629855 1.0177219670828836 0.7552500424875539 0.8126322965480112 0.9355429838582446 0.8661538469987615 0.9513052443782676 0.8327475217733675 0.910062225092782 0.934450654766524 0.780698962820635 1.0 12.213291146725542 -9.380460792444453 0.41947033117808635 1.005908255465694 0.8669475389997618 0.0 0.09400413457007017 0.8780189542097991 0.36986977145618377 0.04710445537243597 0.0255687463973134 4.164273138584769e-10 9.380460792444453 -0.1389607164659321 LAQTT(ph)PVDSALGSSR ddPTM_A549_PD325901_60min_R1 2 LAQTTPVDSALGSSR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 LAQT(0.138)T(0.857)PVDS(0.005)ALGSSR;LAQT(0.141)T(0.776)PVDS(0.079)ALGS(0.003)S(0.001)R 110.75 2.7387e-06 26769000.0 7489.0 8182.0 7662.9 8675.5 9384.400000000001 8892.6 7850.3 8021.2 8309.7 8401.8 9775.4 True False 8249.277766889589 8871.5258547315 8182.950474761052 9211.365931509958 8725.272118422468 8820.181613932129 8149.047462348987 7861.210873490329 7960.47220676016 7871.308914139837 8573.087771366185 0.9622294775100624 1.0348110379042297 0.9544927910445314 1.0744513735500993 1.017751404291529 1.0288220357886955 0.9505382050988119 0.916963768847264 0.9285420164888385 0.9181416455841891 1.0 13.065599198464689 -7.765281578329027 24.977707557575567 0.9598460429718382 1.0135991366198274 0.4090097434318939 0.03907031731016702 98.09626585516999 637714.9694753719 0.006424283366100002 0.009058294146164448 1.7167949284023884e-08 7.765281578329027 0.05375309364798919 LARPTRLS(ph)LGDPK ddPTM_A549_PD325901_60min_R1 2 LARPTRLSLGDPK 13 2 P35568 P35568 IRS1 Insulin receptor substrate 1 1 LARPT(0.012)RLS(0.988)LGDPK;LARPTRLS(1)LGDPK 103.88 2.4350999999999998e-05 17504900.0 2158.7 1860.77 2012.19 2339.59 2535.0 2403.0 2286.3 2838.3 2967.5 2618.5 2443.0 True False 2377.849634849052 2017.5836182728817 2148.749313681433 2484.101160705594 2356.9503452752383 2383.4307647121113 2373.3063976113635 2781.687879896726 2842.786294759229 2453.1674631239944 2142.526487452954 1.1098344168784824 0.9416843292665171 1.0029044337444233 1.1594261145675289 1.100079909899827 1.112439346103742 1.107713912294621 1.2983213492047 1.3268383431463417 1.1449881611687014 1.0 11.065097324743531 -6.262948420761701 23.188427587808984 1.157778335391948 1.0104953775420433 0.3014642071261311 0.09339356620383028 60.04956798278046 922780.8573678914 0.018180778509362217 0.0445052255457018 5.458226821922113e-07 6.262948420761701 -0.14728295784990464 LAS(ph)IDEK ddPTM_A549_PD325901_60min_R1 1 LASIDEK 7 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 LAS(1)IDEK 68.37100000000001 0.02282 4052700.0 2566.2 3092.1 2833.1 3033.1 3239.8 2539.2 2764.8 2598.3 3112.0 3341.0 3428.6 True False 2826.7187348634093 3352.682118725892 3025.371202814278 3220.447698330109 3012.24762470324 2518.521597069075 2870.0159769566126 2546.4748681730835 2981.2134622715157 3130.0486898213717 3006.9039356861203 0.9400761698156492 1.114994755547743 1.0061416219218005 1.071017820060574 1.0017771399191375 0.8375796669720992 0.9544754466197231 0.8468760301755448 0.9914561708773904 1.0409540034431302 1.0 11.554063062210494 -6.999276124474947 24.995835305624144 0.9680742570705052 1.0369139142810804 0.21829742660729268 0.07158236017588589 35.46068331109574 1224372.2730146586 0.010262083453402973 0.019274426522761037 1.0016681748513683e-07 6.999276124474947 0.06883965721057517 LAS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 LASPEK 6 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 LAS(1)PEK 75.692 0.045644 12453000.0 3000.1 3336.6 2492.9 2697.3 3900.4 3324.7 3080.5 3625.3 4382.7 3686.5 4053.8 True False 3506.4435345971838 3506.4186882291274 2846.430705456367 3358.138621086397 3326.6563268286386 3676.517547242752 3640.186975362133 4139.197377015619 3390.0254477337567 2853.717089614554 3047.1295808116797 1.150736600332945 1.1507284463088387 0.9341351032069166 1.1020662338199192 1.0917344466665246 1.2065510998923186 1.1946282161037856 1.3583923056902094 1.1125307794855046 0.9365263320552303 1.0 11.573235137367604 -10.005216266897538 1.1865881779019687 1.0170445669411377 1.1420476681444132 0.29269776817269844 0.09981776525652578 0.4943818421600584 1.3994532911162736 0.03320293007937822 0.019127811952297798 9.880609445204976e-11 10.005216266897538 0.1250031012032755 LAS(ph)PELER ddPTM_A549_MK2206_60min_R1 2 LASPELER 8 0 P05412;P17535 P05412 JUN;JUND Transcription factor AP-1;Transcription factor jun-D 1 LAS(1)PELER;LAS(1)PELER 146.48 0.00081983 406510000.0 10782.900000000001 15100.0 14426.2 13112.900000000001 17095.8 13972.9 13158.4 12932.0 18038.0 18225.300000000003 16500.5 True False 12602.789903405866 15868.525502685308 16472.052085143652 16325.561088660455 14581.030466669312 15451.503003539647 15549.110954911572 14765.150602589016 13952.421800766997 14108.192071979427 12402.970459367285 1.0161106119451948 1.2794133110831267 1.3280731530488499 1.316262192363012 1.1756079331509701 1.245790518824462 1.2536602425887566 1.1904527750799976 1.124925826960226 1.1374849370316997 1.0 13.598398060950446 -9.291465783270157 0.6699248537110442 1.0160520533482837 1.2428767371519343 0.2993891549856814 0.08874716707468587 0.33563982147113786 0.3327037872357218 0.028972457235418036 0.02034697924867802 5.111333480794056e-10 9.291465783270157 0.2268246838036505 LAS(ph)PELER ddPTM_A549_PD325901_60min_R1 3 LASPELER 8 0 P05412;P17535 P05412 JUN;JUND Transcription factor AP-1;Transcription factor jun-D 1 LAS(1)PELER;LAS(1)PELER;LAS(1)PELER 137.98 0.0010642999999999998 657072000.0 9222.9 10983.8 11331.7 11593.999999999998 13303.3 11884.199999999999 11362.1 12023.4 10032.8 10737.900000000001 11741.3 True False 10159.202018459866 11909.443373649452 12100.737305047676 12310.135048115548 12368.92210189352 11787.419015393956 11794.490933079693 11783.583854825165 9611.156306001812 10059.90716145852 10297.194534233058 0.9865990182748868 1.1565716597910691 1.1751489461346714 1.1954843629680358 1.2011933989178312 1.1447214070013576 1.1454081880136253 1.1443489598696617 0.9333762000950346 0.9769561144071158 1.0 13.329963708913313 -8.753633905888329 24.90993557306714 0.968538759685618 1.1488985502043634 0.6560693401464192 0.055874445664883615 69.62251509568014 222189.05883412765 0.009741083769287881 0.010946528893894187 1.7634619529450775e-09 8.753633905888329 0.1803597905187454 LAS(ph)PMKPVPGT(ph)PPSSK ddPTM_A549_MK2206_60min_R1 3 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 2 LAS(1)PMKPVPGT(0.975)PPS(0.012)S(0.013)K;LAS(1)PMKPVPGT(0.953)PPS(0.036)S(0.011)K;LAS(1)PMKPVPGT(0.999)PPS(0.001)S(0.001)K 76.186 0.00025063 12189200.0 5755.0 6831.5 6631.4 6828.1 8657.1 6586.6 5421.9 6356.6 9023.9 8958.8 10592.0 True False 6726.303303758807 7179.194170304281 7571.832235614478 8500.984806525057 7383.652057991024 7283.589640168769 6406.989047789633 7257.667516271056 6980.001058207193 6935.000857843176 7961.714075671545 0.8448310552010704 0.9017146436144454 0.9510304142611172 1.0677329938915228 0.9273947780356878 0.9148268288640372 0.8047248352421177 0.9115709817372328 0.8766957707682377 0.8710436963611043 1.0 12.958863346367963 -10.926503201922285 1.1989964015183765 0.9997007875778031 0.9109447754194978 0.0 0.07317149788881994 0.6389953176586933 1.6409098816134948 0.04620044492258315 0.011045119403910906 1.1843956347730288e-11 10.926503201922285 -0.08875601215830531 LAS(ph)PMKPVPGT(ph)PPSSK ddPTM_A549_PD325901_60min_R1 2 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 2 LAS(1)PMKPVPGT(0.997)PPS(0.002)S(0.002)K;LAS(1)PMKPVPGT(0.978)PPS(0.011)S(0.012)K 69.72 0.00078425 44256000.0 6206.6 5921.5 5937.8 6510.5 7592.6 6564.9 7249.6 6953.4 6713.7 7615.7 7760.299999999999 True False 6836.689462942575 6420.5255865060535 6340.774814892036 6912.638798581702 7059.321969048038 6511.43763098566 7525.487495133334 6814.708982163226 6431.546536520653 7134.843402296509 6805.832296594827 1.0045339298711764 0.9433858059826783 0.9316678017565209 1.0156933784631033 1.0372459475059412 0.9567437672896433 1.1057409538137712 1.0013042762709332 0.9450051450339966 1.0483425232012102 1.0 12.7325558867655 -4.87285540029007 19.035060474414305 0.9845720316661893 6.258954066335154 0.0 0.052088008314122206 2163.7050664023527 311875.54911436164 0.006686901144620133 18548.079770534823 1.3401228112459993e-05 4.87285540029007 5.274382034668965 LAS(ph)PMKPVPGTPPSSK ddPTM_A549_MK2206_60min_R1 4 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LAS(0.994)PMKPVPGT(0.006)PPSSK;LAS(0.499)PMKPVPGT(0.499)PPS(0.001)SK;LAS(0.999)PMKPVPGT(0.001)PPSSK;LAS(1)PMKPVPGTPPSSK 105.96 2.351e-07 59081200.0 17540.899999999998 19018.6 19414.1 16446.5 24086.4 18458.399999999998 16931.8 18497.8 25714.2 24084.699999999997 25199.6 True False 20501.37508616902 19986.565504991428 22167.31130763384 20475.893238311448 20543.322467061145 20411.655636305724 20008.088891230847 21119.91979713664 19889.974757139527 18643.949542449398 18941.843846421136 1.0823325993178083 1.0551541690999464 1.1702826550236884 1.0809873317681349 1.0845471345675037 1.07759602506502 1.056290456908775 1.1149875359745947 1.0500548372379033 0.984273215089986 1.0 14.209289152732355 -9.543348634504614 0.47407409149441065 0.9967975260931322 1.0963604582651043 0.5808693602266255 0.0312692724128271 0.49557423814149043 0.2502705895609839 0.01996769060158957 0.009733852063885558 2.86187964326954e-10 9.543348634504614 0.0995629321719721 LAS(ph)PMKPVPGTPPSSK ddPTM_A549_PD325901_60min_R1 1 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LAS(1)PMKPVPGTPPSSK 109.05 1.6344e-07 14443000.0 5447.7 4920.5 5774.2 6136.6 6570.4 6255.2 5907.6 6012.5 6630.7 5414.5 5926.2 True False 6000.746493615226 5335.16780349625 6166.071935085321 6515.643844770216 6108.917770649475 6204.25972510495 6132.416950762758 5892.575970784998 6352.034737880377 5072.627545955647 5197.314969276994 1.1545858831122562 1.0265238560745593 1.1863956622861924 1.2536557594231423 1.175398798564501 1.1937432620074657 1.1799202063014178 1.133773112774176 1.2221762151090139 0.9760092616940835 1.0 12.343550776964937 -10.87276748827558 1.0388499461175533 0.9966853345394526 1.172284405610029 0.6081693901615297 0.05568469818305582 0.33532113173867617 0.6222110684114044 0.04439198964508741 0.009927674174331425 1.3403941129222739e-11 10.87276748827558 0.17559907107057637 LAS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 LASPPR 6 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 LAS(1)PPR 65.038 0.057839 14008000.0 1906.1 2234.7 2222.3 1890.6 2656.6 2040.1 2092.0 2250.1 2851.0 3354.9 3569.3 True False 2227.8030803292195 2348.43668482456 2537.4555564746597 2353.79708487226 2265.81765917674 2255.98202789122 2472.0893207133868 2569.0585656422477 2205.2530521114704 2597.0257599207584 2682.9443023314248 0.8303575584455121 0.8753207000174457 0.945772729709544 0.8773186542959007 0.8445265364651029 0.8408605523159078 0.9214091095984329 0.9575519564121355 0.821952602666835 0.9679760245727036 1.0 11.389601389359546 -10.983758743315267 1.2040817718433867 1.0012853460534923 0.8765249594391226 0.4491648201022095 0.04424898942251112 0.330277790783772 0.8371537851304345 0.034620049891660905 0.007609275845667132 1.0381049375441016e-11 10.983758743315267 -0.12476038661436972 LAS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 LASPPR 6 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 LAS(1)PPR 66.79899999999999 0.055545000000000004 22332000.0 4800.4 4533.8 4762.8 4679.7 5646.3 5855.9 5673.7 4825.4 4722.6 5042.5 5958.3 True False 5287.733074132294 4915.879237372485 5086.0322490430435 4968.754440630183 5249.723366677544 5808.2114919174555 5889.615758267769 4729.153611546932 4524.125545283884 4724.115689441567 5225.466872775659 1.011915911606107 0.9407540717526877 0.9733163318938906 0.9508728237312285 1.0046419763999002 1.1115201059216082 1.1270984778321498 0.9050203028145701 0.865783987427857 0.9040561933430105 1.0 12.351344226151811 LAS(ph)PQPSYAADANDSK ddPTM_A549_MK2206_60min_R1 2 LASPQPSYAADANDSK 16 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 LAS(0.999)PQPS(0.001)YAADANDSK;LAS(0.999)PQPS(0.001)YAADANDSK 137.61 1.339e-10 5337500.0 3076.1000000000004 3480.6 3296.2 2655.7 4210.4 3553.5 2763.9 2855.7 4875.7 4007.0 4462.3 True False 3595.2704765755766 3657.747673155398 3763.65072458794 3306.346619218901 3591.0557374831515 3929.529011377603 3266.0648534989145 3260.504220214464 3771.361734892984 3101.8159170176395 3354.1877567852293 1.0718751415458654 1.0905017662640064 1.1220751482901943 0.9857368933895994 1.0706185812701625 1.1715292333974174 0.9737274983763059 0.9720696802433759 1.1243740685845174 0.9247591792507549 1.0 11.711747733314322 -7.779052927836661 24.999636918423555 1.0465498921554734 1.082088344832047 0.14471142152250216 0.06947580580052401 599.33587516902 850660.4030608587 0.010705034289773282 0.014808906433617354 1.6632099412128134e-08 7.779052927836661 0.03553845267657363 LAS(ph)PQPSYAADANDSK ddPTM_A549_PD325901_60min_R1 1 LASPQPSYAADANDSK 16 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 LAS(0.999)PQPS(0.001)YAADANDSK 106.94 7.610600000000001e-07 9248800.0 3539.7 2969.0 3478.6 3919.2 3890.9 3303.5 2774.1 3628.6 3685.0 4157.2 4150.2 True False 3899.0477382105832 3219.2080497064076 3714.678714521108 4161.2800828509935 3617.6166068763005 3276.5973912719355 2879.6698935457653 3556.224726418369 3530.1322649326894 3894.7136825278076 3639.751710285407 1.0712400318935063 0.8844581460349055 1.0205857460067862 1.143286799231888 0.9939185128077401 0.9002255241786822 0.7911720696244852 0.977051461056807 0.9698827134161516 1.0700492760321851 1.0 11.829624323394468 -7.000147336405968 24.99995501214403 0.9625120692382834 1.0250600744519331 0.1458528033594214 0.08653501345076799 10.01145025835438 1699369.9816722353 0.012325821223612747 0.023120494069830563 9.996608029283014e-08 7.000147336405968 0.06254800521364978 LAS(ph)PQPSYAADANDSKAEYSDVLAK ddPTM_A549_MK2206_60min_R1 2 LASPQPSYAADANDSKAEYSDVLAK 25 1 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 LAS(0.999)PQPS(0.001)YAADANDSKAEYSDVLAK;LAS(0.966)PQPS(0.031)Y(0.003)AADANDSKAEYSDVLAK 91.113 6.289600000000001e-09 4808800.0 2757.31 3900.1 2994.71 3417.7599999999998 4847.5 3211.44 2995.23 3042.02 5313.6 4953.5 5633.8 True False 3222.6765182427785 4098.598431326026 3419.4049091167826 4255.111353429079 4134.439171444419 3551.2724492186544 3539.4245201148906 3473.235650795532 4110.078084075593 3834.5009096448384 4234.771975030058 0.7610035527874921 0.9678439489760094 0.8074590389468402 1.0048029453578493 0.9763073893524276 0.838598269318491 0.835800496693749 0.820170642309703 0.9705547567402187 0.9054799012212746 1.0 12.048068573145175 -8.897892221837683 6.910479776382412 0.9871193235773792 0.8823530622847909 0.15626032106680832 0.07762257417575284 0.19865552381298657 11.825870200729156 0.012535162316396304 0.013292889843456737 1.2650502540033812e-09 8.897892221837683 -0.10476626129258826 LAS(ph)PQPSYAADANDSKAEYSDVLAK ddPTM_A549_PD325901_60min_R1 2 LASPQPSYAADANDSKAEYSDVLAK 25 1 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 LAS(0.969)PQPS(0.029)Y(0.002)AADANDSKAEYSDVLAK;LAS(0.995)PQPS(0.005)Y(0.001)AADANDSKAEYSDVLAK 98.29 1.3407e-09 8217000.0 3946.5 3941.0 4530.8 4336.8 5102.799999999999 5585.6 4861.6 4953.7 4911.3 4676.5 5128.9 True False 4347.145774740256 4273.121900940702 4838.287333913714 4604.6742864125845 4744.396931704332 5540.112725499778 5046.610848369599 4854.894567397529 4704.895140505811 4381.224991903515 4498.077814775874 0.966445213655527 0.9499884343716316 1.0756344227794983 1.0236982275599031 1.0547609728136131 1.231662268558559 1.1219483201895335 1.0793264961867792 1.0459790457716307 0.9740216092997535 1.0 12.135092903985955 -5.755510702531541 24.909485181631126 1.0516685214501118 0.9582167815298177 0.26339214199373107 0.06628773080360972 161.9916695485434 680590.902034617 0.009840956692160875 0.03615474308035099 1.755857623206926e-06 5.755510702531541 -0.0934517399202941 LAS(ph)PSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_A549_MK2206_60min_R1 2 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.482)PS(0.15)GS(0.165)T(0.165)S(0.019)S(0.019)GLEVVAPEGTSAPGGGPGTLDDSATICR;LAS(0.445)PS(0.445)GS(0.027)T(0.027)S(0.027)S(0.027)GLEVVAPEGTSAPGGGPGTLDDSATICR 85.99799999999999 2.9789000000000003e-07 13863400.0 634.99 1035.85 991.54 941.65 983.06 934.3399999999999 699.96 540.98 1269.3000000000002 1041.83 1213.73 True False 742.1607879850217 1088.5703405269255 1132.1552816752392 1172.354292272275 838.4531762517078 1033.211238635304 827.1336715710046 617.6655716817666 981.8055766555915 806.4798794176409 912.3273437561198 0.8134808115357918 1.1931795621133092 1.240952920488025 1.285014967813641 0.9190266870657777 1.1325005719783605 0.9066194028183278 0.6770218780671324 1.0761549386576803 0.8839808265499343 1.0 9.833407747147591 -6.776423814324227 24.99829227007347 0.9998545496665349 1.145144130703268 0.1883002395734401 0.16441121994451371 343.42009009578686 572921.9211561768 0.023393567354699128 0.04433338740088822 1.673309149239723e-07 6.776423814324227 0.14528958103673306 LAS(ph)PSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_A549_PD325901_60min_R1 1 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.324)PS(0.324)GS(0.088)T(0.088)S(0.088)S(0.088)GLEVVAPEGTSAPGGGPGTLDDSATICR 78.04 3.2805e-06 9107500.0 1004.2 782.79 1051.0 803.48 841.26 814.02 1112.1 1044.1 848.78 1023.9 1065.9 True False 1106.1456447470327 848.7584605017437 1122.327180176417 853.1091347645227 782.1727997894466 807.3908910074704 1154.4215740644704 1023.274606419395 813.1087283119587 959.2507792601325 934.8010572968091 1.1832952435309667 0.9079562478845743 1.2006053816647175 0.9126103657087025 0.8367264817300036 0.863703442251366 1.2349382417289345 1.094644254445355 0.8698200777214014 1.0261550003313276 1.0 9.868515555641292 -2.0000021534092767 0.7546653132462724 0.961006462635692 35.97271216880985 0.0835697219199043 0.1339668443751547 564.257857396099 2.233128673341703 0.0213824146601993 33639.316428006896 0.009999950416041932 2.0000021534092767 35.011705706174155 LAS(ph)PVAPGALTTPGGSAPAQVVHTQPPPR ddPTM_A549_PD325901_60min_R1 1 LASPVAPGALTTPGGSAPAQVVHTQPPPR 29 0 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 EP400 E1A-binding protein p400 1 LAS(0.999)PVAPGALT(0.001)TPGGSAPAQVVHTQPPPR 100.88 7.543099999999999e-15 3706100.0 1483.5 1468.5 1917.7 1977.0 2107.3 2597.7 1736.5 1988.0 2508.2 2254.3 2177.9 True False 1634.1038279050201 1592.255648701198 2047.8466540669037 2099.11479990723 1959.290517790339 2576.5451924646914 1802.5834577492617 1948.3477804441711 2402.789076500453 2111.963113278755 1910.0321068455942 0.8555373608895676 0.8336276877202855 1.0721530003225492 1.0989945102932874 1.025789310435255 1.3489538648226387 0.9437451084140239 1.0200602248837873 1.257983605557628 1.1057212628570148 1.0 10.899381174230756 -5.808640159891348 4.357333884061265 1.1115200947467774 0.841082790850738 0.43389927193125344 0.11079260771794336 0.1425806118868786 5.660587285417095 0.01711828927123987 0.060932203153412516 1.5536737925897988e-06 5.808640159891348 -0.27043730389603937 LAS(ph)SLGNLNAATDDPENKK ddPTM_A549_MK2206_60min_R1 1 LASSLGNLNAATDDPENKK 19 1 A0A2R8Y6L0;A0A0U1RQX7;A0A2R8YDJ8;Q9UNH5;Q9UNH5-5;Q9UNH5-2 A0A2R8Y6L0 CDC14A Dual specificity protein phosphatase CDC14A 1 LAS(0.521)S(0.474)LGNLNAAT(0.005)DDPENKK 46.982 0.0086182 2549100.0 1126.2 1076.9 1400.3 1388.0 1661.1 1457.9 1461.0 1233.3 1827.1 1868.0 1387.7 True False 1316.2750270535473 1131.709610188199 1598.8835961532939 1728.0600623096873 1416.7543904458641 1612.1740103243033 1726.4447885096822 1408.1240518228446 1413.2647672791547 1446.0175026176555 1043.0957914283808 1.2618927598692387 1.0849527143029436 1.5328252776898232 1.656664782381433 1.3582207905429353 1.5455665947195947 1.6551162440657017 1.3499470167496372 1.3548753421235424 1.3862748891331707 1.0 10.026655936741124 -10.149833032160394 0.7003803151176156 1.0071972564790905 1.435756164577738 0.07207657721838956 0.194931281456845 0.46878335056419096 0.44295656740591205 0.10244494658774408 0.03665899592694691 7.082180118893581e-11 10.149833032160394 0.4285589080986474 LAS(ph)SLGNLNAATDDPENKK ddPTM_A549_PD325901_60min_R1 1 LASSLGNLNAATDDPENKK 19 1 A0A2R8Y6L0;A0A0U1RQX7;A0A2R8YDJ8;Q9UNH5;Q9UNH5-5;Q9UNH5-2 A0A2R8Y6L0 CDC14A Dual specificity protein phosphatase CDC14A 1 LAS(0.529)S(0.471)LGNLNAATDDPENKK 108.07 4.518e-10 3650200.0 2458.8 2594.7 2855.0 2546.4 3162.2 3237.7 3123.9 3328.7 3335.4 3115.9 2665.3 True False 2708.4155659271087 2813.3644751004413 3048.757468509679 2703.6853447060043 2940.097980997773 3211.3332446560116 3242.781723963671 3262.306467185368 3195.2247371659423 2919.161542237181 2337.48499672876 1.1586878930634656 1.203586110301311 1.304289641549068 1.1566642560229181 1.2578040009293543 1.3738412221469554 1.3872952033924695 1.39564808833035 1.3669498378118206 1.2488471781947093 1.0 11.190741389677557 -10.806203519643416 1.0671230363015753 1.0009793476535132 1.2946753061258265 0.13034403221177193 0.10991571712759081 0.29410774571970894 0.5976787940518633 0.06383045798107816 0.016126286233597225 1.5624152899765908e-11 10.806203519643416 0.29369595847231333 LAS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 LASSPK 6 0 Q9P2E9;A2A2S5;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LAS(0.772)S(0.228)PK 98.458 0.034143 108610000.0 6258.6 5144.0 3915.1 3108.2 6763.5 8696.2 9266.6 10916.0 6735.4 6103.1 6458.0 True False 7314.898671920912 5405.80762819955 4470.320050917491 3869.7091395323982 5768.59810955427 9616.42611192963 10950.22127118674 12463.376428847956 5209.842654223642 4724.405471212964 4854.300368267261 1.506890409942218 1.1136121002189137 0.9208989373917068 0.7971713421008779 1.188347994957998 1.981011759138878 2.255777442773986 2.567491807948578 1.0732427453975808 0.9732412732628939 1.0 12.245047665174726 -7.002930607423724 24.778747620280146 1.3344768196884673 1.0647342858661268 0.06229963861949128 0.5549698556096682 361.6727076531451 3058059.9222029066 0.09615505032223892 0.17934698197741683 9.932747434769286e-08 7.002930607423724 -0.2697425338223405 LAS(ph)SPKDK ddPTM_A549_PD325901_60min_R1 1 LASSPKDK 8 1 Q9P2E9;A2A2S5;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LAS(0.571)S(0.429)PKDK 40.533 0.027298000000000003 48599000.0 17340.0 16359.0 13377.0 12960.0 15705.0 10923.0 9776.2 12032.0 13808.0 17624.0 20672.0 True False 19100.34403496668 17737.630341915486 14284.84366243571 13760.509765704464 14601.93497930872 10834.046709509112 10148.238640741914 11792.0123210786 13227.697778613458 16511.21763226934 18129.475050604764 1.053551963399488 0.9783863179934597 0.787934764937344 0.7590131389516124 0.8054251399199575 0.5975929628005258 0.5597646160418411 0.6504331917037632 0.7296238717166942 0.910738870606105 1.0 14.146049531170199 -5.661979944531051 3.7336703527113677 0.7995880171964956 1.0384288027020454 0.34625375757317567 0.12810635917971513 0.2664941029197541 6.8490822863852685 0.022977579512483557 0.10395494330023106 2.1778103400577862e-06 5.661979944531051 0.23884078550554977 LAS(ph)SPKDKK ddPTM_A549_MK2206_60min_R1 1 LASSPKDKK 9 2 Q9P2E9;A2A2S5;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LAS(0.5)S(0.5)PKDKK 44.765 0.017725 127450000.0 1750.3 1547.6 1513.5 1630.4 1569.5 1396.7 1813.3 1578.6 1898.3 2458.0 2881.2 True False 2045.7078492735068 1626.3662296659463 1728.1370583289383 2029.8480731914383 1338.6286291040783 1544.497866945576 2142.7531382646193 1802.3713842597442 1468.3380809621908 1902.7360928448604 2165.718522925309 0.9445862089734081 0.7509591908874467 0.7979509063784915 0.9372631076958486 0.6180990811751231 0.7131572503980669 0.9893959513124219 0.8322279027402049 0.6779911911077239 0.8785703556133281 1.0 11.080630033624956 -11.04162852660431 1.3425415580998468 0.9999041555983524 0.7916826360212725 0.12618514807480086 0.11628792971861412 0.43114594305043596 1.3863512074862936 0.08081082136321749 0.01811618433171784 9.085973658401667e-12 11.04162852660431 -0.2082215195770799 LAS(ph)TPFK ddPTM_A549_PD325901_60min_R1 1 LASTPFK 7 0 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 LAS(0.5)T(0.5)PFK 93.162 0.012184 9625100.0 2100.4 2134.5 2646.4 2673.9 2944.5 1922.1 2235.0 2288.6 2428.9 2473.6 2876.1 True False 2313.6310617672452 2314.3818060284016 2826.000618095976 2839.0607301324976 2737.6884779735456 1906.447054870223 2320.0541480389275 2242.9520776280315 2326.821779727274 2317.4164738527825 2522.3579331000583 0.9172493052656167 0.9175469411607069 1.1203804904178414 1.1255582298120559 1.0853687504250593 0.7558193981324208 0.9197957663318255 0.8892283082406833 0.9224788239580003 0.9187500486913861 1.0 11.30055729929248 LAS(ph)TSDIEEK ddPTM_A549_MK2206_60min_R1 3 LASTSDIEEK 10 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.496)T(0.496)S(0.009)DIEEK;LAS(0.628)T(0.108)S(0.264)DIEEK;LAS(0.333)T(0.333)S(0.333)DIEEK 167.6 2.4156999999999997e-10 57545200.0 19473.9 18307.4 16651.5 14949.8 19979.1 14860.0 13662.900000000001 15294.8 18679.1 17481.2 16836.9 True False 22760.61822885641 19239.168462772246 19012.933086728983 18612.501671122023 17040.200856153737 16432.475336730327 16145.2720745578 17462.88473836054 14448.313674393326 13532.184778779329 12655.833055199611 1.7984290824305142 1.5201819097058877 1.5023059330667747 1.4706658652924576 1.346430597008612 1.298411196249076 1.2757178452132445 1.3798289422904457 1.1416327642262378 1.06924488650865 1.0 13.627514853813487 -2.0000000001102602 0.13007578863069438 0.8669054604791044 3.715871015222439 0.8986771184951124 0.0693033989882823 13.534792514507478 0.11443068523729609 0.18228771785601036 7.123958420336187 0.009999999997461165 2.0000000001102602 2.8489655547433346 up LAS(ph)TSDIEEK ddPTM_A549_PD325901_60min_R1 2 LASTSDIEEK 10 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.812)T(0.182)S(0.006)DIEEK;LAS(0.831)T(0.164)S(0.005)DIEEK 143.0 4.6902e-08 27978000.0 5131.5 5388.6 5123.9 5284.4 6220.1 5553.2 6421.7 7922.3 11840.8 22246.0 23800.0 True False 5652.446102389359 5842.716233293342 5471.638666513742 5610.80538625684 5783.221634180085 5507.976580357594 6666.081307589075 7764.283511575882 11343.172353491178 20841.383763473892 20872.75088063049 0.2708050383351588 0.27992075729295796 0.26214267097832883 0.2688100585468856 0.27707040951400436 0.2638835969373299 0.3193676456788966 0.3719818032601053 0.5434440538461762 0.9984972216965562 1.0 14.349333129558943 -9.721076719048426 0.47422290600549827 1.029311282651771 0.2444948331233346 0.9873548438151821 0.03085425083830889 0.0882296297861827 0.04218068251375507 0.02902548879897366 0.011992889970588463 1.9007424800428194e-10 9.721076719048426 -0.7848164495284364 LAS(ph)TSDIEEKENR ddPTM_A549_MK2206_60min_R1 4 LASTSDIEEKENR 13 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.788)T(0.118)S(0.094)DIEEKENR;LAS(0.983)T(0.016)SDIEEKENR;LAS(0.915)T(0.083)S(0.002)DIEEKENR;LAS(0.907)T(0.091)S(0.002)DIEEKENR 166.92 3.0227999999999996e-20 216807000.0 25532.700000000004 26452.199999999997 26612.1 22348.2 27865.399999999998 19296.2 17079.1 17554.4 25572.100000000002 28733.3 28113.0 True False 29841.99554541831 27798.50399351869 30386.09594314868 27823.510003248815 23766.436573072177 21338.111076219102 20182.151394548753 20042.78995809532 19780.060180252458 22242.427573856487 21131.766220671656 1.4121865268519807 1.3154841721808115 1.4379345117600342 1.316667509601309 1.1246781894559867 1.0097646762410988 0.9550622122066652 0.9484673334351451 0.9360344030733728 1.052558851048539 1.0 14.367125734201084 -6.906177185668252 1.7947963082102527 0.9668306575602268 1.385836580806845 0.9486606148451142 0.042207485688496416 0.0434019777921423 0.2817287755336929 0.005517952093827656 0.012218043567352205 1.2411458353019352e-07 6.906177185668252 0.4190059232466181 LAS(ph)TSDIEEKENR ddPTM_A549_PD325901_60min_R1 2 LASTSDIEEKENR 13 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.495)T(0.495)S(0.011)DIEEKENR;LAS(0.91)T(0.087)S(0.003)DIEEKENR 176.04 1.4989e-22 114723000.0 4535.4 5930.0 5750.0 5819.700000000001 7094.7 6865.4 7362.8 11937.0 23356.0 40676.0 41811.0 True False 4995.830469214985 6429.741911336807 6140.229577558894 6179.169651502334 6596.39274738628 6809.490458616113 7642.995383078752 11698.907170604658 22374.428542677848 38107.710418190436 36668.51206176647 0.13624306491628926 0.17534777251136324 0.16745237895707224 0.16851432752694734 0.17989256657796615 0.1857040298538929 0.20843483832134957 0.31904504744829487 0.6101809777552228 1.0392488889104554 1.0 15.162254104975538 -9.148915511523123 0.6214151660237519 0.9562724828537417 0.1408253016502875 0.9716709790555283 0.05498921302664234 0.07575550874828453 0.0654750827069881 0.022116043677621378 0.016732811735438027 7.097158240042148e-10 9.148915511523123 -0.8154471812034542 down LAS(ph)VSADAEVAR ddPTM_A549_MK2206_60min_R1 1 LASVSADAEVAR 12 0 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 LAS(0.992)VS(0.008)ADAEVAR 78.964 0.00094328 3604600.0 639.18 795.97 960.79 796.79 859.49 1054.5 878.83 831.53 1409.9 1043.1 1357.0 True False 747.0579575493574 836.4814731372467 1097.044469290954 992.003585769262 733.0601595595178 1166.0864900795516 1038.502035240222 949.4019239538234 1090.5599011476545 807.4629855355876 1020.0194487052769 0.73239579745034 0.8200642391662265 1.0755132862255186 0.9725339914140111 0.7186727277504366 1.1432002512890116 1.018119837379969 0.9307684526593202 1.0691559876940733 0.7916152839639579 1.0 9.9943809449796 -7.272834407277778 24.999164886652366 1.0306241993198029 0.8792028635925208 0.16182605926194538 0.12806845563664904 671.2276386313613 1472581.6607021205 0.01584579674734104 0.025463255011056576 5.3353829023509126e-08 7.272834407277778 -0.1514213357272821 LAS(ph)YLDR ddPTM_A549_MK2206_60min_R1 2 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 LAS(1)YLDR;LAS(1)YLDR 64.711 0.025571 14541500.0 1587.8899999999999 1436.74 1360.51 819.16 1588.4 1030.67 1015.27 1097.0 1961.19 2303.0 2498.6 True False 1855.8870118167788 1509.8639291872905 1553.450775835549 1019.8542367734897 1354.748464140756 1139.7348152966254 1199.7314171322564 1252.503109421602 1516.983596376884 1782.7507004970348 1878.1286621481245 0.988157547041582 0.8039193265174771 0.8271269200794675 0.5430161720693956 0.7213288905304558 0.6068459729447101 0.6387908567244025 0.6668888743697898 0.80771015689725 0.9492164921534181 1.0 10.875080183588226 -9.779210351170287 0.8931013026126029 0.9738948736036954 0.7211785900213644 0.3861335913403291 0.11721027865922357 0.36269311913403546 0.60073809428256 0.04310074295916714 0.024889566263611818 1.6626071690931833e-10 9.779210351170287 -0.252716283582331 LAS(ph)YLDR ddPTM_A549_PD325901_60min_R1 2 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 LAS(0.998)Y(0.002)LDR;LAS(1)YLDR 74.464 0.018573 30102000.0 1567.35 1532.6799999999998 1503.29 1412.25 1805.33 1535.0100000000002 1472.83 1483.98 1547.6999999999998 1753.56 2216.26 True False 1726.4662181779136 1661.8443225409276 1605.3122994171324 1499.4814750475405 1678.5298488503918 1522.5093874909433 1528.8793516135001 1454.3808547402118 1482.6555512717302 1642.839922335578 1943.6740700296707 0.8882488297801692 0.8550015396951605 0.8259164044888591 0.7714675511541143 0.8635860686379216 0.783315171492565 0.7865924514752421 0.7482637532526275 0.7628107891819008 0.8452239743623784 1.0 10.924570601869934 -10.793978536994066 1.02987047798255 1.0005269322607808 0.8064386912116795 0.2155553463835107 0.06146647559897581 0.231711767850231 0.43445639755680315 0.03264546299007368 0.008095387064894597 1.6070206706507923e-11 10.793978536994066 -0.19408824104910127 LASDDRPS(ph)PPR ddPTM_A549_MK2206_60min_R1 6 LASDDRPSPPR 11 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 LASDDRPS(1)PPR;LASDDRPS(1)PPR;LASDDRPS(1)PPR;LASDDRPS(1)PPR;LAS(0.034)DDRPS(0.966)PPR;LAS(0.004)DDRPS(0.996)PPR 171.2 3.5233000000000003e-15 1508440500.0 35891.3 39478.4 37126.2 32029.9 45232.2 34407.200000000004 32331.6 33147.0 47246.4 53323.299999999996 52011.2 True False 41948.873981963196 41487.68193411997 42391.253422485526 39877.22693787684 38578.603298733025 38048.14706634908 38205.83321299085 37845.68875843011 36545.16583699732 41277.52949535976 39095.38360390558 1.0729879109760814 1.0611913251562366 1.084303299130455 1.019998354329823 0.986781551745129 0.9732132942301689 0.9772466642116318 0.9680347209753268 0.9347693376602783 1.0558159478255174 1.0 15.254710643221532 -6.585733344050591 1.930796932190204 0.969476766103418 1.0727739882897727 0.5878901554317539 0.030444633068101568 0.11477522971469986 0.8548302835890724 0.00351445745659973 0.009159481401994634 2.5957726721898437e-07 6.585733344050591 0.10329722218635462 LASDDRPS(ph)PPR ddPTM_A549_PD325901_60min_R1 8 LASDDRPSPPR 11 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 LASDDRPS(1)PPR;LAS(0.001)DDRPS(0.999)PPR;LASDDRPS(1)PPR;LASDDRPS(1)PPR;LAS(0.003)DDRPS(0.997)PPR;LAS(0.12)DDRPS(0.88)PPR;LAS(0.005)DDRPS(0.995)PPR;LAS(0.036)DDRPS(0.964)PPR 200.19 4.1884e-24 1869953800.0 54045.399999999994 54916.8 56524.9 56639.00000000001 64513.1 64026.6 60657.8 63974.799999999996 63332.0 61899.2 68379.6 True False 59532.049221879366 59544.83146652635 60361.01962583636 60137.46239349805 59981.92241411279 63505.18859755154 62966.16577222179 62698.77242674027 60670.37628296254 57990.87394821641 59969.3426939984 0.9927080496054396 0.9929211959244214 1.006531286057887 1.0028034274171973 1.0002097691845413 1.058960891427396 1.0499725850509165 1.0455137510289074 1.0116898661461284 0.9670086638121517 1.0 15.871937539491618 -7.0485352783610224 24.995614479351804 1.0165683234040324 0.9992097154527837 0.16065682469714448 0.024594193964828374 694.8505256490646 357846.1593319143 0.0035638726091519472 0.006172931674359759 8.942618868118183e-08 7.0485352783610224 -0.01735860795124866 LASDS(ph)DAESDSR ddPTM_A549_MK2206_60min_R1 2 LASDSDAESDSR 12 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LASDS(1)DAESDSR;LAS(0.078)DS(0.911)DAES(0.008)DS(0.003)R 310.51 2.999699999999999e-129 45811000.0 4382.1 4849.0 4336.6 4785.6 6770.0 4766.3 4493.1 5332.1 7676.3 8111.3 7541.7 True False 5121.691347941175 5095.793388246427 4951.595088965495 5958.072214833749 5774.141968164768 5270.666702386122 5309.438110371569 6087.941503871397 5937.630306532196 6278.9516964574905 5668.887749668819 0.9034737631275885 0.8989053255718684 0.8734685369726665 1.0510125580069607 1.018566996409851 0.9297532311685018 0.9365925636262158 1.0739216884700282 1.0474065758100568 1.1076161627691978 1.0 12.468849987123457 -6.2566343068531305 24.98047641721225 1.015030249584282 0.8926448138027919 0.5566082383914437 0.05096394168868809 217.14334739840385 1128873.846049116 0.0064763343748242 0.01655342078996165 5.538162481402198e-07 6.2566343068531305 -0.12238543578149008 LASDS(ph)DAESDSR ddPTM_A549_PD325901_60min_R1 2 LASDSDAESDSR 12 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LAS(0.121)DS(0.879)DAESDSR;LAS(0.001)DS(0.999)DAES(0.001)DSR 218.12 5.3318e-32 86416000.0 3412.3 3437.3 3295.8 3318.0 3853.5 3977.1 3583.7999999999997 3793.1000000000004 3851.2 3457.3 3628.5 True False 3758.714183997506 3726.9733342054 3519.4728072554117 3522.945324275263 3582.843453853305 3944.711816203301 3720.183470130608 3717.4436448706147 3689.3474569087584 3239.0054879734917 3182.2175029566265 1.1811619351930693 1.1711874913460931 1.1059812234661641 1.107072449008298 1.125895213172718 1.2396109984745651 1.1690538018454593 1.1681928219603797 1.1593636995211525 1.0178454128179808 1.0 11.635816731177355 -10.568807731017086 0.7654639176967002 0.9949252800803124 1.1584256802703075 0.7156018212925771 0.03622350357123313 0.31383323722902023 0.31432236115957785 0.030544320273096504 0.007550413812674306 2.6989340284434082e-11 10.568807731017086 0.163500400189995 LASELAKT(ph)PQK ddPTM_A549_MK2206_60min_R1 2 LASELAKTPQK 11 1 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 LASELAKT(1)PQK;LASELAKT(1)PQK 101.62 9.7204e-05 184090000.0 12864.3 13975.2 15090.900000000001 14098.8 18565.6 14070.400000000001 13442.7 13490.1 20455.3 21244.0 20899.3 True False 15035.479338061565 14686.477987094555 17231.01654016265 17553.006632919172 15834.624833701611 15559.32038882439 15885.06458487277 15402.362986698587 15822.207210401886 16444.96564540123 15709.427018663364 0.9570991558252809 0.9348831099725338 1.096858371708375 1.1173549876813182 1.0079695978019763 0.9904448055514283 1.0111803928940721 0.9804535180309266 1.00717914100906 1.0468214802401143 1.0 13.93934294067755 -6.979433620579864 24.998942260452896 1.001310164366353 1.0297282870999485 0.029067065020359717 0.051534104919700646 590.7102782269874 718019.190495196 0.007451790815210536 0.014081395291620566 1.0484950377860956e-07 6.979433620579864 0.028418122733595563 LASELAKT(ph)PQK ddPTM_A549_PD325901_60min_R1 4 LASELAKTPQK 11 1 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 LAS(0.019)ELAKT(0.981)PQK;LAS(0.004)ELAKT(0.996)PQK;LASELAKT(1)PQK;LASELAKT(1)PQK 83.729 0.0002303 366498000.0 18401.3 18557.3 21085.4 21003.1 24627.5 22581.3 22779.0 21966.8 25829.1 21408.8 22748.399999999998 True False 20269.386429678903 20121.188797850013 22516.382040810513 22300.41378549902 22897.749360262682 22397.405379606156 23645.86731014709 21528.65494137877 24743.592750114753 20057.044714351345 19950.49101398886 1.015984339205809 1.0085560693088438 1.1286129261190867 1.1177877160949294 1.147728612002946 1.1226493304802159 1.1852273356864806 1.0791040143464807 1.2402498130379385 1.0053409061605436 1.0 14.284136633502305 -5.760521021576884 24.935030468837795 1.1220053937853394 1.0122701654855062 0.2504527061730166 0.06678754836115802 26.54672771693701 720664.4221182643 0.011476796800479928 0.03983682702844145 1.7357172452333622e-06 5.760521021576884 -0.10973522829983318 LASLGDTAS(ph)PLVK ddPTM_A549_PD325901_60min_R1 2 LASLGDTASPLVK 13 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 LASLGDT(0.047)AS(0.953)PLVK;LASLGDT(0.227)AS(0.773)PLVK 245.5 4.510399999999999e-57 20822100.0 10058.400000000001 10189.5 10819.900000000001 10324.2 11509.2 11598.0 10996.6 12797.099999999999 10918.0 11524.3 11654.4 True False 11079.521363397287 11048.204925053356 11554.20347934426 10961.90238604059 10700.83349658453 11503.549733304639 11415.081630570408 12541.851801369254 10459.154428367732 10796.653731250655 10220.982683328572 1.0839976650649332 1.0809337289137635 1.1304395905288347 1.0724900653555094 1.0469476202164634 1.1254837318204305 1.1168281939455322 1.2270690783799338 1.0233022354521393 1.0563224756129428 1.0 13.31924628856575 -8.967345936191395 24.99989323226728 1.0102803158587985 1.1086270045710795 0.38473944658880843 0.04628472612525631 105.23773284259568 80570.3846004317 0.007727605551433392 0.00817173626116135 1.0780876320952755e-09 8.967345936191395 0.09834668871228103 LASPMKPVPGT(ph)PPSSK ddPTM_A549_MK2206_60min_R1 2 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LAS(0.001)PMKPVPGT(0.995)PPS(0.002)S(0.003)K;LAS(0.001)PMKPVPGT(0.917)PPS(0.034)S(0.047)K 90.96799999999999 3.9687e-06 10412300.0 5480.5 7733.8 7121.700000000001 6552.299999999999 8786.0 6401.7 6534.6 6722.1 9732.900000000001 8607.3 9098.5 True False 6405.474414639461 8127.417386269377 8131.664148200327 8157.61379414392 7493.591038743823 7079.123644895455 7721.852234767542 7674.978260567866 7528.413690247545 6662.904951970527 6839.091344174618 0.9365972893600111 1.1883767853447558 1.1889977394623765 1.1927920514020316 1.0956998030340235 1.0350971040802506 1.1290757567297065 1.122221926031919 1.1007915103605213 0.9742383332320655 1.0 12.739588943057672 -10.565491902424496 0.4600641048682894 0.9757429901557593 1.1212316894208048 0.294039637048334 0.07198631091623763 1.7150071042180348 0.5152702450409895 0.11348805457955803 0.019120685910150533 2.7196191938959974e-11 10.565491902424496 0.14548869926504548 LASPMKPVPGT(ph)PPSSK ddPTM_A549_PD325901_60min_R1 4 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LAS(0.019)PMKPVPGT(0.931)PPS(0.04)S(0.01)K;LAS(0.298)PMKPVPGT(0.667)PPS(0.029)S(0.006)K;LASPMKPVPGT(0.997)PPS(0.001)S(0.002)K;LASPMKPVPGT(0.946)PPS(0.022)S(0.032)K 101.49 4.8097e-07 102062400.0 19674.3 19537.6 20886.199999999997 22219.4 23945.8 23218.6 24051.5 23725.399999999998 22661.2 23134.1 25240.5 True False 21671.620452545838 21184.10211921316 22303.663130923574 23591.841874081307 22263.929616525365 23029.515419702308 24966.792993985815 23252.17828478375 21708.82857044578 21673.40897790979 22136.078512712353 0.979018051462919 0.9569943523215961 1.007570655214065 1.065764284334867 1.0057756889387428 1.0403611193589177 1.1278778659755762 1.0504199409769188 0.9806989326487431 0.9790988483106047 1.0 14.434112045600372 -3.9385988036028547 12.873144922956367 1.0089513319204066 0.5526170647023145 0.0 0.04810449564925143 0.0 0.0 0.0067476456604445515 0.0 0.00011518639766943681 3.9385988036028547 -0.4563342672180921 LASRPT(ph)RPPEPR ddPTM_A549_MK2206_60min_R1 2 LASRPTRPPEPR 12 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;E5RHK4;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 LAS(0.044)RPT(0.956)RPPEPR;LAS(0.008)RPT(0.992)RPPEPR 75.764 0.00041927 41160000.0 1230.6999999999998 1453.6799999999998 1534.45 1202.8 1766.47 1469.8000000000002 1462.96 1360.15 2058.7200000000003 1785.2800000000002 2289.2 True False 1438.4120722738412 1527.666102830701 1752.058083351727 1497.4860539957433 1506.6246030286595 1625.3332604257228 1728.760895139031 1552.9554277846787 1592.4232071002916 1381.9840080691906 1720.7284612941178 0.835932051238373 0.8878019613168836 1.0182071853649977 0.8702628495314831 0.8755737101573621 0.9445611535961632 1.004668042649142 0.9024988327424648 0.9254355018354663 0.8031389258418113 1.0 10.748803736222351 LASRPT(ph)RPPEPR ddPTM_A549_PD325901_60min_R1 2 LASRPTRPPEPR 12 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;E5RHK4;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 LAS(0.021)RPT(0.979)RPPEPR;LAS(0.019)RPT(0.981)RPPEPR 118.21 6.9473e-06 69328000.0 2670.1 2768.0 2864.0 3183.6000000000004 3740.7 2979.5 2426.3 2740.6 3345.2 3640.3 3470.0 True False 2941.1665863762696 3001.2690742968466 3058.368262631075 3380.2437415198096 3477.9661367144313 2955.235939850077 2518.6341742223044 2685.93658304089 3204.6128772463585 3410.4508367425146 3043.2119981423466 0.9664678596731453 0.9862175478175352 1.0049803511874889 1.110748690391335 1.1428602867093944 0.9710910517091901 0.8276236344230182 0.8825992355052666 1.0530363573758696 1.1206747472158824 1.0 11.571379123941899 -4.000545780813753 16.337610350414806 1.008213841222023 0.26893722507053563 0.0 0.09311479421299669 0.0 0.0 0.012041586211676156 0.0 9.98744082559473e-05 4.000545780813753 -0.7392766161514873 LASS(ph)LGNLNAATDDPENKK ddPTM_A549_PD325901_60min_R1 1 LASSLGNLNAATDDPENKK 19 1 A0A2R8Y6L0;A0A0U1RQX7;A0A2R8YDJ8;Q9UNH5;Q9UNH5-5;Q9UNH5-2 A0A2R8Y6L0 CDC14A Dual specificity protein phosphatase CDC14A 1 LAS(0.168)S(0.832)LGNLNAATDDPENKK 103.84 7.9317e-10 3060600.0 2514.2 2345.6 2371.7 3207.4 3029.4 2922.8 2577.6 3262.5 3156.5 3248.1 3094.0 True False 2769.4397331437835 2543.2719438839154 2532.6578241906855 3405.5138134660865 2816.6253948626468 2898.9976858512514 2675.691978516842 3197.4268781182604 3023.8432820244343 3043.014411675785 2713.4576144819634 1.0206312854724682 0.937280881157033 0.9333692226013285 1.2550458851063522 1.0380207819831302 1.0683777297198394 0.9860820984401736 1.1783588809544363 1.1143875127755507 1.1214527160604786 1.0 11.40591665792531 LASS(ph)PK ddPTM_A549_MK2206_60min_R1 1 LASSPK 6 0 Q9P2E9;A2A2S5;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LAS(0.084)S(0.916)PK 86.095 0.039532 103090000.0 4118.9 3664.3 3478.1 2256.4 5375.7 6035.7 6411.0 7392.1 4976.5 4801.4 4781.5 True False 4814.069622563356 3850.797218509257 3971.346879797737 2809.2181012936467 4584.941651146729 6674.393767826599 7575.795714671853 8439.952812356814 3849.3306958375097 3716.7604052828747 3594.1215873133974 1.3394287047928917 1.0714154001082987 1.1049561856270742 0.7816146541089988 1.2756779479388645 1.8570306000180985 2.107829557412039 2.3482658021777363 1.071007366424373 1.0341220559711641 1.0 11.811423499978213 -6.959392715577434 24.66289394979579 1.2961265305798242 1.0703691094000678 0.057130626305871846 0.47140579822729795 446.3227541081383 271072.5908761355 0.08252542662063062 0.1559582736137335 1.0980125004619088e-07 6.959392715577434 -0.2257574211797564 LASS(ph)PKDK ddPTM_A549_MK2206_60min_R1 2 LASSPKDK 8 1 Q9P2E9;A2A2S5;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LAS(0.016)S(0.984)PKDK;LAS(0.16)S(0.84)PKDK 111.61 0.0012488 21204300.0 5588.200000000001 4096.1 2915.7 2489.6 3915.5 4262.5 4677.5 4399.4 3810.8 5218.5 6131.0 True False 6531.3515416272685 4304.573994142338 3329.190103052319 3099.5521117623903 3339.535136831484 4713.554920781493 5527.3412034593 5023.028422597439 2947.659884597121 4039.6372255943465 4608.50349300814 1.4172391431484008 0.9340502834972538 0.7224015579250942 0.672572368983754 0.7246463286613778 1.0227951281652998 1.199378759687432 1.0899478388631367 0.6396132473522494 0.8765616065438906 1.0 12.170082628869512 -8.745132781376382 24.9971467818916 0.8298173293278498 0.954164584200405 0.06167757583132061 0.22383671996784316 636.3749542167317 975528.3883009134 0.04273721116890464 0.04838942600757705 1.7983210116516185e-09 8.745132781376382 0.12434725487255516 LASS(ph)PKDK ddPTM_A549_PD325901_60min_R1 3 LASSPKDK 8 1 Q9P2E9;A2A2S5;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LAS(0.104)S(0.896)PKDK;LAS(0.029)S(0.971)PKDK;LAS(0.166)S(0.834)PKDK 88.49600000000001 0.0022295 318784000.0 25239.6 22608.1 21337.8 17928.7 21900.7 18414.4 16466.8 16956.2 19513.4 24169.5 28977.6 True False 27801.90561158852 24513.363930133855 22785.91142261499 19036.115079968007 20362.47038531337 18264.439231674864 17093.45308497871 16617.99528911844 18693.3196576764 22643.433645207322 25413.5389041411 1.0939800913385676 0.96457892081057 0.8966052114411369 0.7490540830134483 0.801244976629183 0.7186893293597414 0.6726120730156695 0.6539032344846141 0.7355653900933234 0.8909988384780841 1.0 14.633309668122793 -5.583960470036264 1.7598339793245077 0.8195123804276188 1.1048635813619931 0.4660963807763179 0.1007470213465117 0.5193284546565429 2.450050877947134 0.019605587688898484 0.1998232653174501 2.6063907757715126e-06 5.583960470036264 0.2853512009343744 LASS(ph)PKDKK ddPTM_A549_MK2206_60min_R1 2 LASSPKDKK 9 2 Q9P2E9;A2A2S5;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LAS(0.053)S(0.947)PKDKK;LAS(0.053)S(0.947)PKDKK 66.538 0.0010934 1066430000.0 31770.0 24451.2 19449.2 13434.099999999999 18487.7 22249.8 24435.4 22890.5 20196.7 42480.0 45257.0 True False 37131.99929807421 25695.661640480732 22207.389015428587 16725.455103079665 15768.183820508097 24604.259067778094 28874.99588305922 26135.298474216208 15622.179697502546 32883.738496358696 34018.437870342466 1.0915257026086482 0.755345137787247 0.6528044909078309 0.49165852843763425 0.4635187506436008 0.7232624602444863 0.8488042864611565 0.7682686246155107 0.4592268391936386 0.9666445773227873 1.0 15.05402927338867 -11.072089205207373 1.397353084598275 0.9995036031447749 0.6616115449328294 0.26258985538069 0.17931580012175777 0.43588056004808884 1.5229557925989325 0.1367323424217118 0.030377025814910086 8.47053409314412e-12 11.072089205207373 -0.33789205821194557 LASS(ph)PKDKK ddPTM_A549_PD325901_60min_R1 2 LASSPKDKK 9 2 Q9P2E9;A2A2S5;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 LAS(0.049)S(0.951)PKDKK;LAS(0.279)S(0.721)PKDKK 62.528 0.0014665 1163050000.0 26008.3 24333.0 19304.0 19804.2 22260.5 21857.7 14736.8 18436.2 21632.5 26505.0 32896.7 True False 28648.6434697015 26383.62730667091 20614.08552438207 21027.46045539846 20696.999274555976 21679.698138097334 15297.616988286389 18068.475528080897 20723.361254045143 24831.469776628408 28850.61444936291 0.9929994219008437 0.9144910016727053 0.7145111436209732 0.7288392589455853 0.7173850425571443 0.7514466693993088 0.5302353963772927 0.6262769744399634 0.7182987832171721 0.860691193257298 1.0 14.816314424715143 -10.598279470776902 0.9688511154076611 0.9942773250985315 0.7388662456379876 0.22669715588815909 0.12429868882377132 0.4585479487510154 0.7924315699352427 0.07662799303068675 0.02294073571706213 2.5218574217416542e-11 10.598279470776902 -0.25541107946054387 LASS(ph)VLR ddPTM_A549_MK2206_60min_R1 2 LASSVLR 7 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 LAS(0.003)S(0.997)VLR;LAS(0.05)S(0.95)VLR 121.85 0.0064536 22849000.0 2118.8 2330.23 2512.02 2074.51 3310.8 2493.8 2430.01 2479.08 3507.1 3502.3 3256.6000000000004 True False 2476.401640313494 2448.82875378294 2868.262208961652 2582.765043128292 2823.7857057902384 2757.6922607495353 2871.5113624410797 2830.497181864087 2712.747449687878 2711.1279975470115 2447.896342412384 1.0116448141235501 1.0003809031266566 1.171725354242329 1.05509575645797 1.153556078688944 1.1265559790950337 1.1730526790244828 1.1562978108275013 1.1081953931980981 1.1075338242775488 1.0 11.257326752229469 -10.479633052811815 0.9303942234343041 1.0035081813556408 1.1079287262529491 0.0 0.06539640472207192 0.5213627777639539 0.846766464671439 0.03354225970881475 0.011050346106102898 3.314110213800621e-11 10.479633052811815 0.10442054489730834 LASS(ph)VLR ddPTM_A549_PD325901_60min_R1 2 LASSVLR 7 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 LAS(0.088)S(0.912)VLR;LAS(0.179)S(0.821)VLR 93.374 0.012157 27136000.0 2461.7 2299.51 2560.1000000000004 2701.2 2486.5 2593.3 2845.4 2429.3 2981.0 2500.1000000000004 2575.75 True False 2711.6099717922416 2493.297777831046 2733.8437811319204 2868.0469891296984 2311.856817959322 2572.1810246058753 2953.683254062625 2380.8457057510177 2855.718936706743 2342.2432593302665 2258.9490790245377 1.200385611597395 1.103742355674394 1.2102281572068248 1.2696377336527578 1.0234213951195532 1.1386626854451265 1.3075475146779707 1.0539616531679934 1.2641803054453549 1.036872978270806 1.0 11.141436034690662 -10.991930702262184 1.2400694020429923 0.9990479466539857 1.180778185881308 0.32504757821726626 0.08616316446050559 0.39322429014188726 1.0666285836496632 0.06092878633746229 0.013630506003848148 1.0187539314749708e-11 10.991930702262184 0.18173023922732234 LASSVLR ddPTM_A549_MK2206_60min_R1 2 LASSVLR 7 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 ; 85.265 0.037898 9194900.0 1858.52 1799.4299999999998 1578.42 1464.27 2008.65 1397.67 1769.67 1529.21 2116.42 1871.0100000000002 2249.3999999999996 False True 2172.1927395485336 1891.0133010130476 1802.2636905236614 1823.016215733579 1713.1802458425648 1545.5705117017405 2091.196132020486 1745.9802005092147 1637.054249228256 1448.3475415271207 1690.8118997182373 1.2847039578503767 1.1184054839738071 1.0659161381724347 1.0781898424285827 1.013229352199411 0.9140996180351579 1.2367999848883071 1.032628289876698 0.9682060136323031 0.8565988574888066 1.0 10.723500455682629 -2.0000000000000004 0.49108562001363687 0.9993034372204844 9.14353269267579 0.46101407900943736 0.08920214445961377 53.63936412828189 0.5212081815061528 0.014579593476829415 451.87397466520616 0.00999999999999999 2.0000000000000004 8.144229255455304 LASSVLR ddPTM_A549_PD325901_60min_R1 2 LASSVLR 7 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 ; 94.262 0.033362 17388000.0 2065.05 2128.7 1576.6999999999998 1896.76 2044.1 1860.38 2087.87 1674.31 1967.54 2189.4 2406.8999999999996 False True 2274.6923557905375 2308.0930196733007 1683.7043434673242 2013.9185573454915 1900.5294677621748 1845.229682087024 2167.3250353763015 1640.9145735792138 1884.8511361046574 2051.160910354658 2110.8665585961985 1.0776106838810735 1.0934338839534532 0.7976365614447214 0.9540719422287021 0.9003550982522053 0.8741574281768751 1.0267465873435646 0.7773653748489343 0.8929276596992235 0.97171510060719 1.0 11.043619664229938 -5.726677300869015 24.99729233629233 0.9266065441754806 1.0855226657542043 0.4359733620356926 0.07496027381856721 138.1155126295333 99316.54267771583 0.010396464010584696 0.04026163034533079 1.876388225859122e-06 5.726677300869015 0.1589161215787237 LAST(ph)SDIEEK ddPTM_A549_MK2206_60min_R1 1 LASTSDIEEK 10 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.28)T(0.71)S(0.01)DIEEK 125.72 1.268e-05 7051700.0 2516.1 2372.4 2614.3 1928.4 3312.6 2406.4 1891.0 3114.5 2841.2 2183.9 2642.0 True False 2940.7561672610823 2493.145026660306 2985.0470509344827 2400.858086569167 2825.320928174685 2661.0436507609606 2234.570222499528 3555.989912756223 2197.6727364640883 1690.5554732155776 1985.9184845094635 1.4808040663297772 1.2554115620088662 1.5031065344415742 1.2089409033131573 1.422677189528532 1.3399561318944357 1.1252074241362848 1.7906021523509705 1.1066278669574545 0.8512713318307007 1.0 10.955590690807574 -8.973589670484047 24.998234150975065 1.047041432898266 1.3791452912036777 0.5008478093868378 0.17779745881615266 107.56490011237777 101814.64892548334 0.026914313501122902 0.028056311571664952 1.0626991409646561e-09 8.973589670484047 0.33210385830541167 LASTNS(ph)SVLGADLPSSMK ddPTM_A549_MK2206_60min_R1 1 LASTNSSVLGADLPSSMK 18 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;H0YA99;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 LAS(0.013)T(0.077)NS(0.455)S(0.455)VLGADLPS(0.001)S(0.001)MK 50.07899999999999 0.006979000000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LASTNSS(ph)VLGADLPSSMK ddPTM_A549_PD325901_60min_R1 2 LASTNSSVLGADLPSSMK 18 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;H0YA99;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 LAS(0.002)T(0.008)NS(0.21)S(0.78)VLGADLPSSMK;LAS(0.001)T(0.008)NS(0.201)S(0.79)VLGADLPSSMK 104.21 2.1168e-09 3047900.0 1094.9 1501.7 1064.8 1333.1 1873.2 1224.1 1155.2 1087.0 1514.8 1476.4 1592.3 True False 1206.0534419772218 1628.253529216609 1137.0637311625587 1415.4425593102314 1741.6328941891818 1214.1313354490617 1199.1617681496955 1065.318932264996 1451.1382238588983 1383.1798520359994 1396.4571944213426 0.8636522814986682 1.1659888578907118 0.8142488976425303 1.0135953790526002 1.247179577825063 0.869436843677953 0.8587171686609403 0.7628726011228993 1.039156967829733 0.9904921236122494 1.0 10.447555636051138 LASTS(ph)DIEEKENR ddPTM_A549_PD325901_60min_R1 2 LASTSDIEEKENR 13 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.033)T(0.181)S(0.786)DIEEKENR;LAS(0.041)T(0.195)S(0.764)DIEEKENR 106.6 2.5512e-05 80000000.0 5848.0 6406.3 6329.799999999999 6288.0 7255.6 7007.799999999999 7281.5 6905.799999999999 6960.0 6437.0 6879.4 True False 6441.684654929936 6946.181383911807 6759.378292179532 6676.395478915865 6745.991686461152 6950.7308002286845 7558.601467089685 6768.058401504703 6667.4954040519715 6030.566721454705 6033.277412109642 1.0676924356238888 1.1513114530370903 1.1203493276494303 1.106595142718847 1.1181305326555997 1.1520655069295478 1.2528184850109 1.1217880331377192 1.105119978516049 0.9995507100917495 1.0 12.55872620415125 -10.000578426186946 0.7837047513812627 1.0077164078272756 1.1369938021382577 0.572419453473479 0.04421357065558557 0.3298923730909606 0.40929596168194843 0.021231302979045085 0.009514324648547234 9.986690110370985e-11 10.000578426186946 0.12927739431098217 LASVPAGGAVAVSAAPGS(ph)AAPAAGSAPAAAEEK ddPTM_A549_MK2206_60min_R1 2 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK 33 0 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 LASVPAGGAVAVSAAPGS(0.999)AAPAAGS(0.001)APAAAEEK;LASVPAGGAVAVS(0.012)AAPGS(0.986)AAPAAGS(0.002)APAAAEEK 129.71 5.9144e-30 26280000.0 2188.85 2254.5 2428.1 2373.67 2832.3999999999996 2701.0 1598.47 1843.0900000000001 3368.3 3199.1000000000004 3440.3 True False 2558.2743677554204 2369.244420251921 2772.4410910660686 2955.219256558097 2415.757712057592 2986.818027221306 1888.8913080691798 2104.3536517263988 2605.385428069825 2476.421088128556 2585.9785625503046 0.9892867654836387 0.9161887320192479 1.0721052104669706 1.1427856747751404 0.9341754595502757 1.1550049449271889 0.7304357953402159 0.8137552577586239 1.007504650580081 0.9576340361021005 1.0 11.336494600092328 LASVPAGGAVAVSAAPGS(ph)AAPAAGSAPAAAEEK ddPTM_A549_PD325901_60min_R1 3 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK 33 0 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 LASVPAGGAVAVSAAPGS(1)AAPAAGSAPAAAEEK;LASVPAGGAVAVSAAPGS(0.998)AAPAAGS(0.002)APAAAEEK;LASVPAGGAVAVS(0.002)AAPGS(0.996)AAPAAGS(0.002)APAAAEEK 142.91 3.4131999999999996e-40 33931900.0 5357.97 5575.299999999999 5416.23 5926.2 5704.0 4927.8 5214.68 6526.299999999999 6281.5 5865.4 7097.900000000001 True False 5901.907170070958 6045.150097517052 5783.807938236835 6292.247914623285 5303.370717731741 4887.669630606882 5413.127500982385 6396.1278267166945 6017.510399504662 5495.057643004572 6224.903297295262 0.9481122658781469 0.971123535387881 0.9291402070052905 1.0108185804841796 0.8519603380884762 0.7851800095803236 0.8695922237594284 1.027506375801184 0.9666833542810677 0.8827538968183153 1.0 12.603835710020121 -8.261185798086366 24.99988001176422 0.9870704875460419 0.9094616982250354 0.13690714709639595 0.06701306023256674 25.151125441826228 2479596.5157905417 0.010422150021679477 0.013027486544016096 5.480424534829166e-09 8.261185798086366 -0.07760878932100645 LASVPAGGAVAVSAAPGS(ph)AAPAAGSAPAAAEEKKDEK ddPTM_A549_MK2206_60min_R1 2 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEK 37 2 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 LASVPAGGAVAVSAAPGS(1)AAPAAGSAPAAAEEKKDEK;LASVPAGGAVAVS(0.038)AAPGS(0.961)AAPAAGS(0.002)APAAAEEKKDEK 103.5 1.3788999999999999e-14 9053900.0 1136.47 1503.53 1272.52 1434.81 1523.1399999999999 1138.95 1182.12 1349.9099999999999 2153.86 1998.2200000000003 2159.54 True False 1328.2783519761533 1580.0532549041347 1452.9824707398352 1786.338514411069 1299.0881236913567 1259.4729330261787 1396.895902390873 1541.2638764259934 1666.0141490076517 1546.8207141759385 1623.2666177280719 0.8182749139726752 0.9733787645529121 0.8950978569210234 1.1004590958146068 0.8002925147993025 0.7758879036081825 0.8605461894768539 0.9494828881426456 1.0263342637695645 0.9529061321675381 1.0 10.664684263280936 -8.546703730427067 3.993423288981279 1.012146410655107 0.8932502839296698 0.21166279751556116 0.08657242454908837 0.21043484694702247 7.535003316766038 0.014609722487740574 0.016931807642536163 2.8398556772963485e-09 8.546703730427067 -0.11889612672543726 LASVPAGGAVAVSAAPGS(ph)AAPAAGSAPAAAEEKKDEK ddPTM_A549_PD325901_60min_R1 2 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEK 37 2 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 LASVPAGGAVAVSAAPGS(1)AAPAAGSAPAAAEEKKDEK;LASVPAGGAVAVSAAPGS(1)AAPAAGSAPAAAEEKKDEK 172.19 7.6758e-66 40234000.0 2225.6000000000004 2789.1000000000004 2448.0 2327.2 2956.1000000000004 2737.9 2485.8 3312.4 3300.7 2737.0 3297.7 True False 2451.541273599876 3024.1472453473025 2614.1360010198564 2470.945858545324 2748.473733991374 2715.6034501478507 2580.398479281953 3246.3315834724713 3161.983057493439 2564.1853529006585 2892.1038058426534 0.8476671095440111 1.0456565353006673 0.903887334797166 0.8543766145438824 0.9503371657818379 0.9389716387986368 0.8922219437867372 1.122481003937066 1.0933158938159735 0.8866159463987665 1.0 11.497903620314437 -8.250013944799708 24.981460671153776 1.0511782280211404 0.9227917018392444 0.28954290823361417 0.07645090850418183 462.6845034285474 1011649.5046820757 0.00993522665588084 0.012767148181954456 5.623232692131727e-09 8.250013944799708 -0.12838652618189594 LASVPAGGAVAVSAAPGSAAPAAGS(ph)APAAAEEK ddPTM_A549_MK2206_60min_R1 2 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK 33 0 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 LASVPAGGAVAVSAAPGS(0.003)AAPAAGS(0.997)APAAAEEK;LASVPAGGAVAVSAAPGS(0.012)AAPAAGS(0.988)APAAAEEK 108.33 7.413299999999999e-15 10670300.0 1122.3700000000001 1612.05 1375.48 1398.43 1987.58 1677.51 1803.5700000000002 1605.72 2517.3 2023.14 2286.0 True False 1311.7986166880569 1694.0964593777392 1570.5437469377518 1741.0454127779092 1695.2096149313059 1855.0229947589821 2131.25532321178 1833.3357273112606 1947.1355693020726 1566.1112688682474 1718.3231096096251 0.7634178981542511 0.9859009926035448 0.9139979193404165 1.0132235334793618 0.9865488076433016 1.0795542377244831 1.2403111564366762 1.0669330564539543 1.1331603226499292 0.9114183823227764 1.0 10.746785627775223 -4.722649133586553 0.6044739251433642 1.075935438593378 0.3839810528107996 0.4823730026816272 0.08602090254234676 3.320733590582419 0.521914726096327 0.013671812694384451 1.85509908246716 1.8938730603599802e-05 4.722649133586553 -0.6919543857825783 LASVPAGGAVAVSAAPGSAAPAAGS(ph)APAAAEEK ddPTM_A549_PD325901_60min_R1 2 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK 33 0 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 1 LASVPAGGAVAVS(0.005)AAPGS(0.197)AAPAAGS(0.798)APAAAEEK;LASVPAGGAVAVSAAPGS(0.003)AAPAAGS(0.997)APAAAEEK 107.45 8.636499999999999e-15 9224000.0 1614.02 1740.2 2365.1 2307.1000000000004 2531.0 2350.7 2626.7 2547.5 2507.3 2305.02 2610.1000000000004 True False 1777.8741222212748 1886.8527612324306 2525.6099085016617 2449.6043271957365 2353.2312914759877 2331.5566785721007 2726.6605058853916 2496.68811402491 2401.9269003706195 2159.480643822827 2289.0742467871282 0.7766782247088063 0.8242863960750758 1.1033324550510004 1.0701288220047571 1.0280275070932752 1.0185587828112608 1.191162982027536 1.0906977427792839 1.0493005649519178 0.9433860202891213 1.0 11.160548542546692 -5.699419556830059 6.144417877773187 1.0464584308163916 0.7930599517876793 0.7182635559468649 0.06136988923751172 0.07515474867212318 5.39091637173717 0.008056314395772929 0.03177814606090839 1.9979308053878507e-06 5.699419556830059 -0.25339847902871226 LASYLDR ddPTM_A549_MK2206_60min_R1 1 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 133.81 0.015549 54763000.0 2049.0 2266.8 1850.9 1964.3 2479.8 2082.6 2382.1 2230.7 3160.2 2952.4 3136.1 False True 2394.821106759649 2382.170437714374 2113.385451774714 2445.553588180778 2115.0247049711975 2302.9793496820034 2814.8967355981613 2546.908556232238 2444.4197458024096 2285.450789469147 2357.319818043195 1.0159084433216974 1.0105418957075616 0.8965204617543282 1.037429698534001 0.8972158502985284 0.976948198566328 1.1941089681818395 1.0804255480049458 1.0369487106045356 0.9695123979258332 1.0 11.202931787248632 -7.559539995261372 24.999992140315218 1.0378296187444331 0.9695749055045542 0.25375631028780665 0.06831670603341464 217.18442571570347 148101.28910064162 0.010375070194933946 0.01538873340251025 2.757147528065884e-08 7.559539995261372 -0.06825471323987897 LASYLDR ddPTM_A549_PD325901_60min_R1 2 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 158.36 0.0040625 182138000.0 5591.6 6000.2 6251.2 5949.9 6587.9 6768.2 6512.0 6513.6 7152.5 6747.1 7275.6 False True 6159.25511568164 6505.857911703734 6675.444023519338 6317.411809796679 6125.188631021197 6713.082023189555 6759.817723503133 6383.681138179648 6851.905298488757 6321.086954532711 6380.747323828373 0.9652874190269862 1.0196075132779738 1.0461852953478419 0.9900739661332189 0.9599484700087068 1.0520839773924453 1.0594084643125035 1.0004597916517268 1.0738405629856056 0.9906499401609488 1.0 12.63950968941096 -7.289499055130424 24.70754005168059 1.035934480908824 0.9999541395249149 0.1791424066110907 0.03340191245253533 805.8222849309923 709553.7001998049 0.005385682383618583 0.008610912586848603 5.134532945926126e-08 7.289499055130424 -0.035980341383909153 LAT(ph)KSSPVKVGEK ddPTM_A549_PD325901_60min_R1 1 LATKSSPVKVGEK 13 2 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LAT(0.42)KS(0.29)S(0.29)PVKVGEK 89.541 0.00035086 9497400.0 3608.1 3132.2 3875.7 4466.2 4096.6 4816.0 3936.2 4979.4 4425.0 4126.9 3927.3 True False 3974.391655857168 3396.161486456854 4138.728308477392 4742.067030523864 3808.8689485027767 4776.780092739709 4085.99424497129 4880.081960736267 4239.032638352008 3866.3268296988404 3444.2669972058884 1.1539150881976734 0.9860331644474545 1.2016281873138392 1.3768000664207498 1.105857632870119 1.3868785714390908 1.1863175091495501 1.4168709814585114 1.2307502994950337 1.122539812632221 1.0 11.749981268457946 -10.503101471405515 0.9545809421128618 1.0076911146966214 1.2267436416817061 0.18286288281310703 0.12697094292102343 0.49983746401048945 0.8552887355822296 0.06857669617582932 0.022540325835745816 3.1397750105827636e-11 10.503101471405515 0.2190525269850847 LAT(ph)LSDQVNRR ddPTM_A549_PD325901_60min_R1 1 LATLSDQVNRR 11 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 LAT(0.5)LS(0.5)DQVNRR 60.628 0.0050734 19479000.0 2651.4 2977.2 2973.9 2904.7 3434.6 3676.3 2678.8 2774.2 3274.7 3456.1 3242.4 True False 2920.5681761424817 3228.0990924843077 3175.726737513463 3084.1167219476647 3193.3655447267583 3646.3614316733815 2780.7431998956067 2718.8664046822005 3137.0757470760045 3237.881256178283 2843.6053552670705 1.027065225746905 1.1352134664203872 1.116795877329187 1.0845797277161215 1.1229988503193118 1.2823022100867145 0.9778935022558501 0.9561335224123761 1.103203628895041 1.1386535231342543 1.0 11.473505541635753 -13.427659149730784 0.20183539179297316 0.7825336752709684 1.1150014028970365 0.0 0.09143004748593073 37.15499724644279 0.7661404812026189 3.4378613577174226 0.07823075888999717 3.735432132213595e-14 13.427659149730784 0.33246772762606813 LATATGAK ddPTM_A549_PD325901_60min_R1 1 LATATGAK 8 0 Q9BZH6 Q9BZH6 WDR11 WD repeat-containing protein 11 0 68.78699999999999 0.020425 3083900.0 1993.1 2352.5 2134.1 1786.8 2347.7 2743.9 1944.5 2190.4 2737.3 2126.2 2230.7 False True 2195.43804475733 2550.7534310994693 2278.9328593858168 1897.1665778827708 2182.8056511253153 2721.5545881371445 2018.499011571228 2146.710753664441 2622.260800217164 1991.9513691404375 1956.3380415723705 1.1222181433392704 1.3038408377773754 1.1648972779541549 0.9697539676517042 1.1157609803318682 1.39114740413152 1.031774145714049 1.0973107448951216 1.3403924804884797 1.0182040766019371 1.0 10.933939964135696 -11.161253633738905 1.563288110709104 1.0003000698610873 1.1924823991248958 0.1847321746155821 0.12431960188219598 0.4861336032210529 2.1370704414192505 0.09508418672597274 0.02032710680533262 6.898368123255318e-12 11.161253633738905 0.19218232926380852 LATKS(ph)SPVK ddPTM_A549_MK2206_60min_R1 1 LATKSSPVK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LAT(0.006)KS(0.642)S(0.351)PVK 64.878 0.0016939 172840000.0 7505.3 7576.7 8740.8 6874.1 9289.5 6842.6 6691.1 6665.8 10247.0 10259.0 9889.5 True False 8772.011153032308 7962.321667297732 9980.376874424564 8558.254808590076 7923.026855726234 7566.679390249726 7906.786258998728 7610.697563156344 7926.070861096543 7941.4847748150605 7433.664213685208 1.1800386593845917 1.0711166711887898 1.3425918345963106 1.151283480471787 1.065830608966722 1.0178936218721906 1.0636458725755347 1.0238150855866237 1.0662400981880276 1.0683136265685724 1.0 12.859857806303747 -6.753304886244642 3.3939168680645566 1.0337705691562018 1.1931993880005745 0.5539145590506014 0.062290519657323594 0.12441864126468284 3.0038978823831157 0.00868759278928815 0.018266377482896598 1.76479845038355e-07 6.753304886244642 0.15942881884437266 LATKS(ph)SPVK ddPTM_A549_PD325901_60min_R1 1 LATKSSPVK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LAT(0.007)KS(0.496)S(0.496)PVK 126.66 4.8377e-05 11987000.0 4259.9 4607.6 5012.3 4613.2 5269.3 5062.3 5273.8 5657.0 5675.9 4879.7 6192.4 True False 4692.36191202737 4995.898622373608 5352.464819408427 4898.146886662638 4899.2025460981495 5021.074307200218 5474.497344934091 5544.166697169354 5437.361661473936 4571.594909225187 5430.774056857824 0.8640318788630125 0.9199238580115356 0.9855804648417457 0.9019242626154554 0.9021186473246072 0.9245596032226292 1.008051023227721 1.020879646091765 1.0012130139363455 0.8417943485334857 1.0 12.406942126964626 -7.7415409010024545 6.902670378293172 1.0029837307192966 0.9180916874023529 0.12895912514855734 0.05589622854513358 0.06980898160752615 13.194477430325382 0.0042114629931902575 0.006154285607756517 1.813255898945277e-08 7.7415409010024545 -0.08489204331694367 LATKS(ph)SPVKVGEK ddPTM_A549_MK2206_60min_R1 2 LATKSSPVKVGEK 13 2 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LAT(0.127)KS(0.436)S(0.436)PVKVGEK;LAT(0.045)KS(0.54)S(0.415)PVKVGEK 75.961 0.00033802 86288700.0 10229.0 14356.3 16479.3 12564.9 19981.6 12722.8 12187.5 10311.7 20891.8 20406.8 22967.9 True False 11955.405124960698 15086.97434928484 18816.312537376987 15643.301064059786 17042.33310946546 14069.11825128887 14401.810992444734 11773.415053256824 16159.840657349154 15796.889706861883 17264.336548207742 0.6924914311984853 0.873880922510808 1.0898949105188962 0.9061049650172488 0.9871409226689728 0.8149237714408101 0.8341942913491122 0.6819500431065828 0.936024423077338 0.9150012607059493 1.0 14.075507273427881 -8.984642075490402 18.260179271618682 0.9717786781982938 0.8676834961304986 0.11071296647876006 0.11211885662038926 7.056617634937846 8391.905025659189 0.020397102784384225 0.02068704884280569 1.0359956324381646e-09 8.984642075490402 -0.10409518206779522 LATKSS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 LATKSSPVK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LATKS(0.029)S(0.971)PVK;LATKS(0.015)S(0.985)PVK 112.36 0.00023448 13493000.0 4722.0 5185.4 6008.4 4745.700000000001 7028.9 4873.700000000001 5094.5 4880.0 7599.6 7857.4 7600.5 True False 5518.958158184027 5449.314711365853 6860.481467633692 5908.39671304257 5994.958121127525 5389.43169909977 6020.104705723877 5571.754944373213 5878.302734067466 6082.407882798697 5713.086086871373 0.966020478995853 0.9538303166634118 1.2008363541727518 1.0341865365235823 1.0493379637502562 0.9433485890374805 1.0537395400986571 0.9752618566657104 1.0289189843604423 1.0646448854982289 1.0 12.480054553804443 LATKSS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 LATKSSPVK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LAT(0.166)KS(0.166)S(0.668)PVK;LATKS(0.169)S(0.83)PVK 111.94 0.00024894 390496000.0 18128.5 16893.6 18889.1 18066.1 19967.5 19479.3 19792.9 20231.2 19819.8 18894.1 20861.5 True False 19968.891974503662 18317.282960094348 20171.02791538569 19182.001965909985 18565.05168413543 19320.66703914133 20546.12964059047 19827.672844930625 18986.842731211113 17701.123301512715 18295.667751944242 1.0914546681348436 1.0011814386030162 1.1025029634811858 1.0484450322329206 1.0147239191180961 1.0560241528811194 1.1230051791035107 1.0837359485183906 1.0377780679359692 0.9675035391715426 1.0 14.15921445140781 -9.499460408742616 1.2460003478152226 1.0088813762604996 1.0626118575050492 0.373152429456171 0.036992386407254 0.3569644424549222 1.143518660295536 0.00889406207939864 0.006840534258936637 3.166209088986065e-10 9.499460408742616 0.0537304812445496 LATKSS(ph)PVKVGEK ddPTM_A549_MK2206_60min_R1 2 LATKSSPVKVGEK 13 2 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LAT(0.307)KS(0.274)S(0.419)PVKVGEK;LAT(0.064)KS(0.415)S(0.521)PVKVGEK 45.28 0.010697 71053700.0 6357.1 7994.400000000001 7167.4 6488.299999999999 9220.1 6929.9 7025.0 5214.4 10293.400000000001 11144.900000000001 11968.099999999999 True False 7430.023063827118 8401.280813156782 8183.845095386076 8077.933791270853 7863.835503792619 7663.217418304671 8301.351566927116 5953.55716843026 7961.961335182119 8627.259349530796 8996.090467243645 0.8259168903293208 0.9338813169728929 0.9097112934985372 0.8979382566998452 0.8741392199674107 0.8518386343720975 0.9227732421271001 0.6617938303431046 0.8850468283053653 0.9590009550197579 1.0 13.135082454002307 -10.178972449906652 1.049728742926204 0.9880875895350726 0.8659079521615874 0.27702645677261084 0.07151239935662278 0.4049093486057988 0.8886490903175883 0.027683414298327262 0.013205263349218505 6.62258513687928e-11 10.178972449906652 -0.12217963737348514 LATKSS(ph)PVKVGEK ddPTM_A549_PD325901_60min_R1 3 LATKSSPVKVGEK 13 2 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LAT(0.214)KS(0.173)S(0.612)PVKVGEK;LAT(0.012)KS(0.045)S(0.943)PVKVGEK;LAT(0.02)KS(0.152)S(0.829)PVKVGEK 93.75399999999999 5.7344e-05 216984600.0 13436.5 15183.0 14807.1 17100.9 16727.8 21603.7 19135.3 19574.9 17307.6 18129.6 23480.7 True False 14800.563588571491 16462.52469474314 15811.998848325624 18157.18375403821 15552.897035777169 21427.766629883907 19863.50431273795 19184.463263288024 16580.221760800276 16984.89396198311 20592.722756421033 0.7187278614702136 0.7994340956981975 0.7678440114673651 0.8817281701311986 0.7552618087342339 1.0405504353814747 0.9645885368191195 0.9316137302584769 0.8051495645776313 0.8248007882632731 1.0 14.32984697433209 -6.670487065076105 1.288749002313487 0.918040090704258 0.7630768889008664 0.3981922299590679 0.07966186842240458 0.4050828534285037 1.3201984145555312 0.013958226359942842 0.04194045855464929 2.1355656902825086e-07 6.670487065076105 -0.15496320180339151 LATLS(ph)DQVNRR ddPTM_A549_MK2206_60min_R1 2 LATLSDQVNRR 11 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 LAT(0.089)LS(0.911)DQVNRR;LAT(0.119)LS(0.881)DQVNRR 91.62 0.00012366 21452400.0 2849.3 2558.3 2653.8 2883.7 3858.1 2900.1 2656.4 2557.3999999999996 4119.700000000001 4688.9 4849.9 True False 3330.1921813032054 2688.506542617206 3030.148744891532 3590.206629454211 3290.5786007941665 3206.9866570694207 3139.0334950014503 2919.919281709028 3186.5945278090603 3629.6742334175215 3645.535979569434 0.9134986460061016 0.7374790861163684 0.8311943050002255 0.9848227118247348 0.9026323205244594 0.8797023743675109 0.8610622724870746 0.8009574718431096 0.8741086484038547 0.9956489947593973 1.0 11.831915224926428 -10.414076482699917 0.7645108299775714 1.0007585246771353 0.8635738626111394 0.4118615661497671 0.06065223849858888 0.541786519484062 0.5731700867836033 0.04214615707352249 0.012439067373743307 3.854104778494484e-11 10.414076482699917 -0.1371846620659959 LATLS(ph)DQVNRR ddPTM_A549_PD325901_60min_R1 1 LATLSDQVNRR 11 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 LAT(0.041)LS(0.959)DQVNRR 77.26 0.00048405 19976000.0 2442.6 2318.7 2696.6 2447.0 2654.9 2569.4 2753.4 2639.4 3036.7 2773.3 3199.4 True False 2690.570953852917 2514.104986478357 2879.6074919730977 2598.1456324597825 2468.428982907784 2548.4756582818563 2858.1821437182916 2586.755096430757 2909.0780594087087 2598.1933647056626 2805.894082667613 0.9588996856556123 0.8960085136528579 1.0262709165541288 0.9259599813509994 0.8797299221505199 0.9082579681193723 1.0186350801242532 0.9219004781433101 1.0367740098881413 0.9259769927721271 1.0 11.454244835567788 -8.761786656005379 24.999999397221075 1.0173655069197864 0.942061664833616 0.05884659263651659 0.05229539281811166 7.140944499978463 514064.49392624444 0.007612874404326801 0.008353959344896975 1.7306663276301354e-09 8.761786656005379 -0.07530384208617047 LATNT(ph)SAPDLK ddPTM_A549_MK2206_60min_R1 1 LATNTSAPDLK 11 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 LAT(0.018)NT(0.767)S(0.215)APDLK 198.52 6.5184e-24 12013000.0 4126.6 4842.0 5962.7 4770.2 7677.0 6379.7 5489.7 5203.3 8638.5 7673.9 9470.1 True False 4823.069194316436 5088.437118145847 6808.300520447942 5938.899214142415 6547.723469660407 7054.795619497877 6487.107430172215 5940.883709437939 6681.893542849858 5940.3606602449845 7118.412808536359 0.6775483979423952 0.7148274840205703 0.9564351918848354 0.834301040678692 0.9198291312648257 0.9910630093042381 0.9113137443213343 0.8345798240744995 0.9386774443366042 0.8345063457293933 1.0 12.79733988420819 -4.231497439178789 0.4729629294843764 0.9618852408969693 1.269970606892274e-16 0.5008114258211191 0.07150556574861114 4.345281272779857 0.3156637399423954 0.012224977525088465 2.9087969247099084 5.868168297791401e-05 4.231497439178789 -0.9618852408969691 LATNTS(ph)APDLK ddPTM_A549_MK2206_60min_R1 2 LATNTSAPDLK 11 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 LATNT(0.08)S(0.919)APDLK;LATNT(0.027)S(0.973)APDLK 128.36 1.1283e-07 15909300.0 6426.6 8031.3 7773.1 7300.1 10012.9 7939.3 8106.799999999999 7593.4 11453.5 10172.1 12989.0 True False 7511.252964715256 8440.058865544137 8875.442463228715 9088.624827713942 8540.015674008422 8779.431456319187 9579.700623881106 8669.787703812204 8859.300537481144 7874.215545169731 9763.47282183702 0.7693218490776724 0.8644525385134549 0.9090456464812262 0.9308803325991024 0.8746903719450922 0.8992119521942108 0.9811775787868341 0.8879819570369801 0.9073923489259271 0.8064974101795245 1.0 13.253178683646972 -2.0000000155723985 0.03157672405635416 1.3616108590715232 0.21399972815065088 0.0 0.06762623589006142 537.8631699978989 1.2654660126018167 14.169211679067086 36.86892147920697 0.00999999964143228 2.0000000155723985 -1.1476111309208723 LATNTS(ph)APDLK ddPTM_A549_PD325901_60min_R1 2 LATNTSAPDLK 11 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 LAT(0.002)NT(0.06)S(0.938)APDLK;LAT(0.03)NT(0.271)S(0.699)APDLK 188.96 6.834899999999998e-19 56861000.0 17926.9 18045.7 19969.2 18934.3 21347.5 19207.3 21175.8 21102.1 21943.1 20413.4 22862.1 True False 19746.825690913734 19566.47447038967 21324.429996554634 20103.828708084722 19848.12524487699 19050.882116960005 21981.656656842384 20681.202061222793 21020.90781618576 19124.494440227358 20050.20663479253 0.9848689367942799 0.9758739561534766 1.063551632408166 1.0026743900583621 0.989921231556543 0.9501588918241658 1.096330679141145 1.0314707692505931 1.0484135250610735 0.9538302915562571 1.0 14.291329484531605 LATQS(ph)NEITIPVTFESR ddPTM_A549_PD325901_60min_R1 2 LATQSNEITIPVTFESR 17 0 P04792;C9J3N8 P04792 HSPB1 Heat shock protein beta-1 1 LAT(0.029)QS(0.916)NEIT(0.055)IPVTFESR;LAT(0.004)QS(0.995)NEIT(0.001)IPVTFESR 162.59 1.7841e-22 4608700.0 1587.44 1885.0900000000001 1725.41 2065.5 2259.37 2170.0 2517.2 2642.6000000000004 2145.0 2141.0 2672.5 True False 1748.5957401884364 2043.9531500239298 1842.5066983332 2193.0812439091465 2100.679645603358 2152.328239461208 2612.993423464694 2589.8912699204034 2054.853109438432 2005.8168946146545 2343.7994423733194 0.7460517775436525 0.8720682807033324 0.7861196077713403 0.9356949251973725 0.896271074915958 0.9183073434311305 1.1148536757133067 1.1049969647991267 0.8767188319482226 0.8557971549748192 1.0 11.194633409084128 -6.401802237712497 1.164627846478449 0.9653023830881517 0.7921205729834431 0.426256210017838 0.08418087065338654 0.4493864270725095 1.1083787722938343 0.013577183244781608 0.056608254141404926 3.964585262941659e-07 6.401802237712497 -0.17318181010470868 LATQSNEITIPVTFESR ddPTM_A549_MK2206_60min_R1 2 LATQSNEITIPVTFESR 17 0 P04792;C9J3N8 P04792 HSPB1 Heat shock protein beta-1 0 ; 209.41 1.8641999999999999e-54 4746200.0 1764.13 1912.95 2196.13 2176.5 2543.7 2085.28 2083.55 2573.5 3133.5 3308.2 4063.4 False True 2061.87201516247 2010.3109841299236 2507.574256959318 2709.7425977067974 2169.525099619015 2305.942945503163 2462.104065091959 2938.3015060132084 2423.7672531712706 2560.8753223553144 3054.34563586516 0.6750617844134177 0.6581805806534047 0.8209857546947315 0.8871761485956542 0.7103076594029558 0.7549711854565511 0.8060987061127267 0.9620068768611769 0.7935471430314157 0.83843664982923 1.0 11.576647614293119 -14.999999999996437 0.09166733289207651 1.692987868051051 0.605396904999187 0.35998358755048987 0.08376723837817959 68.8856348806967 0.45972169028565013 9.441031327086407 0.713679108441962 1.000000000008205e-15 14.999999999996437 -1.087590963051864 LATQSNEITIPVTFESR ddPTM_A549_PD325901_60min_R1 2 LATQSNEITIPVTFESR 17 0 P04792;C9J3N8 P04792 HSPB1 Heat shock protein beta-1 0 ; 229.23 2.2525999999999995e-63 9281500.0 4448.3 4066.3 3951.0 3998.1 4718.4 5094.1 4059.2 4867.6 4724.3 4802.0 5732.6 False True 4899.888141334617 4408.981371681093 4219.138619293078 4245.053556656096 4386.995861596326 5052.615338543472 4213.67507727947 4770.511899441673 4525.754100195793 4498.800900485554 5027.526541945477 0.9746120881618522 0.876968293433409 0.839207627069119 0.8443622368253889 0.8725952662795315 1.0049902862548163 0.8381209014261962 0.9488785110611573 0.9001949691238198 0.8948338438298279 1.0 12.295633077668505 -11.607809592847527 0.3091852457861531 1.0869655889551728 0.8864451972952954 0.0 0.0615398504618577 5.137706270873869 0.39853628011857317 0.3795927282027721 0.02160529013678658 2.467120756628621e-12 11.607809592847527 -0.20052039165987745 LATVVGENGS(ph)VLR ddPTM_A549_MK2206_60min_R1 1 LATVVGENGSVLR 13 0 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 LATVVGENGS(1)VLR 132.31 3.492e-08 2706200.0 1092.7 1305.8 1041.0 1198.9 1337.1 1675.4 1344.3 1354.2 1784.8 1748.4 1632.7 True False 1277.121046049912 1372.2596424772494 1188.6294533996854 1492.630553820667 1140.4143612456598 1852.689715959487 1588.54190909895 1546.1619970635672 1380.5456497399339 1353.435225683464 1227.2555297723688 1.0406317307747572 1.1181531548949515 0.9685264597016338 1.2162345311228868 0.9292395377979545 1.5096201817914185 1.2943856194264551 1.2598533553565239 1.1249048109777082 1.1028145262743276 1.0 10.261219951881184 -4.320621654872233 16.440947582314802 1.1110916639748598 1.0995320205134351 0.0 0.1642107539666989 0.0 0.0 0.022126994386234326 0.0 4.7794546497978724e-05 4.320621654872233 -0.011559643461424685 LATVVGENGS(ph)VLR ddPTM_A549_PD325901_60min_R1 2 LATVVGENGSVLR 13 0 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 LATVVGENGS(1)VLR;LATVVGENGS(1)VLR 176.91 4.4057e-22 10599800.0 4608.7 4219.5 4772.8 4846.0 5533.4 4728.5 4769.0 4988.700000000001 5521.5 5577.6 5104.8 True False 5076.57183125438 4575.092073336537 5096.710909177929 5145.326413935476 5144.753073193689 4689.992663729179 4950.4869046969325 4889.196464940562 5289.450556533472 5225.429384120832 4476.941961993386 1.133937378315712 1.0219234719092605 1.1384357788075026 1.149294866365542 1.1491668011043314 1.0475884439745855 1.1057741973703625 1.0920839507071958 1.1814874084671654 1.1671872069108034 1.0 12.128297900270741 -11.030792147674292 1.328060308923278 1.0000967799896985 1.1186947483803389 0.0 0.06591642112762232 0.3200824409610411 1.007333828107993 0.0338392880690176 0.007635424947225414 9.315536081793024e-12 11.030792147674292 0.11859796839064041 LATVVGENGS(ph)VLRR ddPTM_A549_PD325901_60min_R1 2 LATVVGENGSVLRR 14 1 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 LATVVGENGS(1)VLRR;LATVVGENGS(1)VLRR 109.35 5.591699999999999e-06 9848600.0 2347.3 2807.8 2560.5 2573.0 3463.8 3783.0 3095.3999999999996 3176.8 3350.4 2996.2 3426.6 True False 2585.596168009069 3044.4231599749587 2734.270927537313 2731.928366293023 3220.514637461289 3752.1925022496516 3213.197140867875 3113.4362318486096 3209.5943393298444 2807.0194206653096 3005.149923007078 0.8603884113115441 1.0130686448177542 0.9098617365489998 0.9090822209493434 1.0716652147053976 1.2485874576583693 1.0692302291702693 1.0360335795603755 1.0680313533636254 0.9340696779136027 1.0 11.553221251566416 -6.762192189861403 24.999996418539535 1.0549031785131204 0.9285809459460861 0.4118432722394234 0.07900652843574342 16.38554114076162 544178.2323889647 0.010989176114396145 0.021680822288435632 1.7290510268652873e-07 6.762192189861403 -0.12632223256703434 LAVEAVLR ddPTM_A549_MK2206_60min_R1 2 LAVEAVLR 8 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 ; 79.597 0.01126 817570.0 281.24 376.81 329.41 247.98 343.63 533.46 248.03 385.88 384.53 404.91 637.52 False True 328.70643634215895 395.98801951436116 376.12529130104764 308.73511113224515 293.0824822039086 589.910383117911 293.0938404476776 440.5796717079375 297.43456896823005 313.44054977779194 479.20618934310085 0.6859394633294532 0.8263416214577367 0.7848923900933809 0.6442636134467741 0.611599951590083 1.2310157845134768 0.6116236537959843 0.9193947855971709 0.6206818183545488 0.654082849404467 1.0 8.904502731617894 LAVEAVLR ddPTM_A549_PD325901_60min_R1 2 LAVEAVLR 8 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 ; 86.95299999999999 0.0075415000000000005 4222300.0 956.9300000000001 998.28 929.5400000000001 1073.31 1279.21 1063.79 1123.88 1263.93 1308.6 1345.72 1273.66 False True 1054.0768291453676 1082.4085590639652 992.6241741781043 1139.6059210361302 1189.3627026349252 1055.1268469384509 1166.6498684107341 1238.7199246160974 1253.6040927790823 1260.7510095379882 1117.00789439596 0.9436610380586223 0.9690249858523113 0.88864562117968 1.0202308566963088 1.0647755567368593 0.9446010652494338 1.044441918686366 1.1089625515009947 1.1222875854937344 1.1286858542926947 1.0 10.125423666692496 -6.71378263675234 0.8775998898012124 1.0597386659613108 0.9329588492383065 0.4831407610953692 0.055066815548550314 0.5310178020494217 0.7449117282345374 0.010300371926308735 0.03971946085668659 1.9329355041030164e-07 6.71378263675234 -0.1267798167230043 LAVLSS(ph)SLTHWK ddPTM_A549_MK2206_60min_R1 1 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLS(0.094)S(0.815)S(0.074)LT(0.018)HWK 84.365 0.00014965 5191900.0 684.28 1009.7 621.18 607.58 1609.9 1039.7 808.39 1300.0 2239.1 1873.4 2467.4 True False 799.7697349602208 1061.089417222606 709.2726646136564 756.4371272753023 1373.0858426216344 1149.7203639029963 955.2639990303511 1484.2789810830275 1731.9474251079614 1450.197638867194 1854.676483224318 0.4312179197796465 0.5721156367809891 0.3824239273151294 0.40785394871684116 0.7403371181126706 0.6199034571809691 0.5150569426370489 0.8002899667453799 0.9338272419872417 0.7819140707203309 1.0 10.856951839835585 -8.31580724748227 0.7502017577940323 0.992778715020995 0.4813505019242646 0.6725756522229187 0.1162963946706687 0.1715543175562542 0.19524807982717543 0.023045426942182517 0.030386040307420276 4.832732451650772e-09 8.31580724748227 -0.5114282130967305 LAVLSS(ph)SLTHWK ddPTM_A549_PD325901_60min_R1 2 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLS(0.023)S(0.9)S(0.077)LTHWK;LAVLS(0.076)S(0.827)S(0.097)LTHWK 102.73 6.337e-05 29371000.0 4143.1 3726.9 3465.2 4593.7 4370.2 5065.5 3807.2 4301.2 5639.4 5151.2 6979.1 True False 4563.7044620109855 4040.978942556686 3700.369309940363 4877.442415950352 4063.252228371537 5024.2482474611725 3952.0850793797795 4215.409191773877 5402.395629541767 4825.952352890707 6120.71494416001 0.7456162398749474 0.6602135501200438 0.604564882321634 0.796874623381063 0.6638525507953004 0.8208597023873795 0.6456901057205094 0.6887118956251912 0.8826412729278273 0.7884621971319409 1.0 12.579484464728965 -8.99527078455595 1.6341825704157198 0.9607932863701687 0.7006603765854071 0.4445119421887752 0.08404536585132201 0.12041168630347017 0.6488174847150514 0.01360787671493785 0.013413991699092449 1.0109489265251856e-09 8.99527078455595 -0.26013290978476156 LAVLSSS(ph)LTHWK ddPTM_A549_MK2206_60min_R1 1 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLS(0.042)S(0.419)S(0.534)LT(0.004)HWK 82.54299999999999 0.00019699 6449400.0 805.99 1239.6 681.66 714.79 1701.2 1312.9 1166.1 1150.7 2133.5 2115.2 2612.7 True False 942.0214074364126 1302.6903452403108 778.3296380446008 889.9135820881421 1450.9557335660124 1451.8302065675136 1377.9652757571132 1313.815248870955 1650.2656564994118 1637.3748509297995 1963.8944831483238 0.4796700716457311 0.663319927021723 0.3963194788331289 0.45313716685100086 0.7388155249766688 0.739260799918375 0.7016493439851686 0.6689846425785436 0.8403026082408801 0.8337387089681723 1.0 10.939501702742357 -8.269739545971543 0.2987633521874574 1.03223194039272 0.44139965823738925 0.6563643667402997 0.10176910362083771 0.5067898127743854 0.13309878722554325 0.07614536164663945 0.10587515156516193 5.373539603646525e-09 8.269739545971543 -0.5908322821553308 LAVPAS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LAVPASPR 8 0 A6NHQ4 A6NHQ4 C17orf96 Uncharacterized protein C17orf96 1 LAVPAS(1)PR 68.22399999999999 0.0076391 4961000.0 1627.7 2024.6 1792.6 1782.2 2099.9 1968.4 1844.4 1999.1 1802.4 2082.2 2277.1 True False 1792.942905750592 2195.220147334317 1914.2566157794924 1892.2824463301292 1952.4102682617242 1952.3700030209393 1914.5896512944073 1959.2263822363889 1726.6513960148393 1950.729536649524 1997.0311357262055 0.8978041822560776 1.0992418235562669 0.9585512121138698 0.9475477935610728 0.9776563987079474 0.9776362361576173 0.9587179774231116 0.9810695222455461 0.8646091516179367 0.9768147835813065 1.0 10.963641110687648 LAVPTEVSTEVPEMDT(ph)ST ddPTM_A549_MK2206_60min_R1 2 LAVPTEVSTEVPEMDTST 18 0 O00488 O00488 ZNF593 Zinc finger protein 593 1 LAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333);LAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333) 59.542 0.0018631000000000001 3626600.0 1226.5 1377.2199999999998 930.0 1340.61 1688.8000000000002 1523.83 1163.85 1625.56 1647.17 1949.4099999999999 1930.8600000000001 True False 1433.503214953982 1447.3146154177657 1061.8879843051952 1669.0595101822692 1440.3797571398334 1685.08067916351 1375.306479881584 1855.9881080687132 1274.088624989986 1509.0369270759547 1451.3741729749959 0.9876868705852866 0.9972029559070154 0.7316431586546424 1.1499856765130845 0.9924248232882452 1.1610242972075682 0.9475891920155297 1.2787798919312092 0.8778498671906131 1.0397297645050159 1.0 10.50320378746122 -4.0132554294973 3.153477714132862 0.9821065894125462 9.618418637389404 0.0 0.14364628368323965 107354.31014503841 965.3248729562772 0.018921786731312586 6708328.295658114 9.69939331426637e-05 4.0132554294973 8.636312047976858 LAVPTEVSTEVPEMDT(ph)ST ddPTM_A549_PD325901_60min_R1 3 LAVPTEVSTEVPEMDTST 18 0 O00488 O00488 ZNF593 Zinc finger protein 593 1 LAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333);LAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333);LAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333) 104.79 5.968899999999999e-09 8171700.0 2441.31 3105.5 2738.3 2573.5 3251.1 2865.0 2381.31 3041.1000000000004 2330.89 2515.59 3325.8 True False 2689.1499940025674 3367.211383753196 2924.1375047355723 2732.459250157438 3022.753951686123 2841.6683898877227 2471.9320551528326 2980.4428748032033 2232.930799188319 2356.7552180867247 2916.7476839832293 0.9219686737970268 1.1544404071163246 1.0025335824531285 0.9368171491700237 1.0363439965290817 0.9742592427491105 0.8474960205598112 1.021837744543261 0.7655550089059941 0.8080079161555187 1.0 11.510144874597042 -7.578814315371322 5.486657596923877 0.8958364572223102 1.0132643317709151 0.29638895898366935 0.08973032074777508 0.2299035329707216 14.549957075083132 0.015803778230767947 0.02368217244777761 2.637458802588368e-08 7.578814315371322 0.11742787454860493 LAVPTEVSTEVPEMDTS(ph)T ddPTM_A549_PD325901_60min_R1 1 LAVPTEVSTEVPEMDTST 18 0 O00488 O00488 ZNF593 Zinc finger protein 593 1 LAVPTEVSTEVPEMDT(0.063)S(0.528)T(0.409) 102.73 6.7987e-09 2185600.0 566.62 772.74 836.26 712.6 674.29 541.29 475.58 764.44 959.95 903.18 875.59 True False 624.1428452764023 837.861511731266 893.0136324398958 756.6156835679782 626.9301965742171 536.8819137041274 493.67845714736166 749.192644508421 919.606639816048 846.153060662337 767.8979808223214 0.8127939659484772 1.0911104504194977 1.1629326482713125 0.9853075570764475 0.8164238117970493 0.6991578661649754 0.6428958917416278 0.9756408575343962 1.197563560241773 1.1019081724322473 1.0 9.584770844030716 -8.529309127037433 23.69122556463975 1.0929417468758564 0.8930477088183136 0.2733788186355306 0.15157475989191274 99.21052171946323 365514.7934505853 0.02948993488904979 0.0334890808499561 2.955907728144323e-09 8.529309127037433 -0.1998940380575428 LAVRPLS(ph)VQAEILK ddPTM_A549_MK2206_60min_R1 2 LAVRPLSVQAEILK 14 1 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 LAVRPLS(1)VQAEILK;LAVRPLS(1)VQAEILK 50.053000000000004 0.0073976 3031500.0 1759.0900000000001 1420.6100000000001 1400.5500000000002 1488.46 2310.0 1725.4099999999999 1795.62 1526.9299999999998 2303.4 2599.5 2394.7 True False 2055.98138637864 1492.9129810840914 1599.1690499125166 1853.132766819508 1970.2020600384963 1907.9917409655368 2121.860911118246 1743.377003527007 1781.6835777739616 2012.2711445688426 1800.0298996422446 1.1421929084551683 0.829382323805181 0.8884124926093455 1.029501102836024 1.0945385187379795 1.0599778044491093 1.1787920364767082 0.9685266916252351 0.9898077682643331 1.1179098441469115 1.0 10.813805155498887 -4.93560449512081 20.485191946699356 1.0023523560345873 4.058367897601391 0.11201332174357947 0.09593962574624351 507.00972245384105 178245.62241580745 0.012079303957896612 7332.48958235905 1.1598331163934769e-05 4.93560449512081 3.0560155415668038 LAVRPLS(ph)VQAEILK ddPTM_A549_PD325901_60min_R1 2 LAVRPLSVQAEILK 14 1 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 LAVRPLS(1)VQAEILK;LAVRPLS(1)VQAEILK 65.71600000000001 0.0012692 7332800.0 2494.4 2121.01 2309.41 2799.8 2943.2 2922.7 2813.6 2437.9 2759.8 2712.2 2294.5 True False 2747.6296517197725 2299.7549563852413 2466.1404502104842 2972.737287192851 2736.4797854887875 2898.898500218096 2920.6730876609963 2389.274172004448 2643.8152034630216 2540.951229133054 2012.2910460338946 1.3654235837977744 1.1428540423702231 1.2255386491288622 1.477289924363545 1.3598827022970785 1.4405960340238315 1.4514168283049653 1.1873402591109097 1.3138334082804888 1.2627155669857582 1.0 10.974623267888548 -10.522627260072834 0.6066438691116215 0.9703266736172317 1.336672236386734 0.17210448226346664 0.12750809390511209 0.5748780100777277 0.33650193291385894 0.11126854122065616 0.023504798830651315 3.0017377013431204e-11 10.522627260072834 0.36634556276950236 LAYIAHPK ddPTM_A549_MK2206_60min_R1 2 LAYIAHPK 8 0 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 0 ; 69.344 0.0076441 7252900.0 2109.6 2273.5 2185.75 2226.9 3354.1000000000004 2610.2 2441.3999999999996 2136.75 3542.5 3325.0 3000.1 False True 2465.6489052318957 2389.211439096362 2495.722216876429 2772.4905999693397 2860.7163331494035 2886.409631489467 2884.970778006528 2439.6408560224313 2740.129406210063 2573.880190687209 2255.0923714522487 1.0933693610271278 1.0594738687168466 1.1067050948645698 1.2294354923403397 1.268558383401005 1.2799518405672485 1.2793137942055322 1.0818363304787093 1.2150852181923957 1.1413635305012653 1.0 11.138970813977206 -10.794283646196222 0.8672029686357529 0.9911689992708136 1.1831269184067654 0.11166326405659333 0.08882819899895483 0.580354609291474 0.7143150605693014 0.07540106713683559 0.015703409543767692 1.605892070998104e-11 10.794283646196222 0.19195791913595184 LAYIAHPK ddPTM_A549_PD325901_60min_R1 2 LAYIAHPK 8 0 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 0 ; 70.91199999999999 0.0068506 19920600.0 3682.2 3907.5 3018.8 3673.1 4370.1 4630.8 3830.7000000000003 4143.9 4330.3 3821.7 4074.4 False True 4056.0142333076287 4236.798738372444 3223.6739215190946 3899.979044784648 4063.159252026556 4593.088300136845 3976.4793847394744 4061.2466636733384 4148.312550023888 3580.397209784597 3573.274629749619 1.1350972577195488 1.1856907675381554 0.9021623736054619 1.0914299763905695 1.1370968293895907 1.2854003053380434 1.112839005329436 1.1365615813184535 1.1609274348763288 1.001993292084431 1.0 11.803031083486447 -4.255787261048745 16.187208864066054 1.0986280728901132 1.1073126683791796 0.0 0.09932137903157513 0.0 0.0 0.01348822478433219 0.0 5.5489746265988685e-05 4.255787261048745 0.008684595489066416 LAYINPDLALEEK ddPTM_A549_MK2206_60min_R1 1 LAYINPDLALEEK 13 0 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 107.09 0.00023992 2063800.0 1289.5 1194.2 1185.9 1592.9 2457.2 1491.2 1406.1 1943.8 2256.7 2253.9 1841.6 False True 1507.1360747518636 1254.979679159391 1354.0784522446559 1983.1605715079982 2095.749135033156 1648.997794221552 1661.5701691467925 2219.339602637839 1745.5610532093854 1744.7424245984676 1384.2798944256726 1.0887509677926537 0.9065938790363438 0.978182560981609 1.4326297589771733 1.513963428546845 1.191231484948865 1.2003137341210648 1.6032448434560458 1.2609885184625942 1.260397143398769 1.0 10.434919962805614 -6.20481876376447 24.25196695061586 1.2148339089443336 0.9827171350875923 0.295584684018358 0.17988957251396576 274.18911774072336 117440.8666060666 0.02990848386830726 0.0791303595807 6.239951817421818e-07 6.20481876376447 -0.23211677385674134 LCAGIMITAS(ph)HNPK ddPTM_A549_MK2206_60min_R1 2 LCAGIMITASHNPK 14 0 Q96G03-2;Q96G03 Q96G03-2 PGM2 Phosphoglucomutase-2 1 LCAGIMIT(0.006)AS(0.994)HNPK;LCAGIMIT(0.009)AS(0.991)HNPK 96.24700000000001 1.146e-05 6226100.0 3839.6000000000004 4182.4 4677.1 4673.5 6137.3 4910.4 4643.9 4306.1 6429.9 5174.2 5635.0 True False 4487.630610792757 4395.266295525234 5340.383109025622 5818.507709801386 5234.511300032147 5430.015268740279 5487.636518384745 4916.502861878177 4973.537916440389 4005.3446263620303 4235.673981911741 1.0594844244285526 1.0376781391332348 1.2608107072998282 1.373691113775297 1.235815438673018 1.2819719581650806 1.295575755315318 1.1607368468097132 1.174202249200402 0.9456215571516311 1.0 12.048375834620328 -10.093650892851585 0.675872096076337 1.0037102245685712 1.219337471483145 0.4619317428894192 0.0967260416548831 0.5692672512510172 0.5063594324042708 0.061039734523712315 0.022378304129282676 8.060261040625018e-11 10.093650892851585 0.2156272469145739 LCAGIMITAS(ph)HNPK ddPTM_A549_PD325901_60min_R1 2 LCAGIMITASHNPK 14 0 Q96G03-2;Q96G03 Q96G03-2 PGM2 Phosphoglucomutase-2 1 LCAGIMIT(0.003)AS(0.997)HNPK;LCAGIMIT(0.31)AS(0.69)HNPK 88.73 1.8377e-05 7250600.0 4678.8 4752.299999999999 5131.6 5165.3 5754.200000000001 5535.0 5535.4 5351.4 6142.1 5369.6 5050.8 True False 5153.788331649486 5152.792999198301 5479.861234817608 5484.348849752562 5350.044842912335 5489.924795123398 5746.052676087105 5244.662128907913 5883.9688967281045 5030.5625396183295 4429.583619659181 1.1634927284759164 1.1632680273444673 1.2371052688783506 1.2381183697294187 1.2077985883747637 1.2393771664583233 1.2971992786376647 1.18400792923996 1.3283345347888085 1.1356739078797182 1.0 12.112955376651124 -10.938060522993563 1.1720630573027264 0.9987936446095597 1.2365971563452849 0.45563864872220694 0.061902158687303956 0.20412347114740295 0.4941325424052924 0.03946694742091215 0.009059446938314833 1.1532925245332784e-11 10.938060522993563 0.23780351173572523 LCDDGPQLPT(ph)SPR ddPTM_A549_PD325901_60min_R1 1 LCDDGPQLPTSPR 13 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LCDDGPQLPT(0.718)S(0.282)PR 151.41 5.832399999999999e-13 174600000.0 12389.0 12826.0 14596.0 11845.0 10980.0 12249.0 11515.0 14267.0 9252.0 13054.0 14532.0 True False 13646.722159700237 13906.892032850912 15586.572332878211 12576.63874805319 10208.80267894363 12149.248205143 11953.209626249783 13982.43349275501 8863.170614696677 12229.768212190422 12744.656125937916 1.0707799429696998 1.0911939792983205 1.2229888495113201 0.9868166409337027 0.8010261381761946 0.9532817586515228 0.9378997368098947 1.0971212839786215 0.6954421152767204 0.9595997013446604 1.0 13.63760482689176 -6.50206964420335 5.801663775038764 0.8823559665771565 1.1230180234995049 0.38242946723980087 0.10847849650360056 0.13771490503922112 15.569127298904245 0.018888810443575932 0.04273551123178657 3.1472435762878864e-07 6.50206964420335 0.24066205692234832 LCDDGPQLPTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LCDDGPQLPTSPR 13 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LCDDGPQLPT(0.004)S(0.996)PR;LCDDGPQLPT(0.023)S(0.977)PR 184.17 3.6754000000000003e-25 287950000.0 5128.4 5978.4 4826.9 4332.5 6273.599999999999 5547.799999999999 4899.7 4550.299999999999 7033.6 6533.0 6576.5 True False 5993.948542657972 6282.675024188997 5511.42700155134 5393.962694493315 5350.761750587668 6134.864513668408 5789.912067255913 5195.31895970931 5440.500830351189 5057.1907626344455 4943.373547833643 1.2125218708759582 1.270928640814992 1.1149121036921512 1.0911501310389817 1.082410968706291 1.2410279041843637 1.1712471273374137 1.0509662904164057 1.1005643772834857 1.023024198697402 1.0 12.271280213038406 -14.070316297287976 0.027267349768193797 1.7757933492707195e-07 1.8868193873408372 0.5313934026612814 0.05826749394436952 593.4116823302385 1.4694074840085323 71.17560792604904 35.98463879831962 8.505183788371154e-15 14.070316297287976 1.8868192097615022 LCDDGPQLPTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LCDDGPQLPTSPR 13 0 O60504-2;O60504;H0YAZ3;H0YB51 O60504-2 SORBS3 Vinexin 1 LCDDGPQLPT(0.041)S(0.959)PR 164.66 5.711600000000001e-19 171570000.0 14005.0 16023.0 18773.0 13735.0 14031.0 13949.0 15511.0 16075.0 10668.0 13299.0 16711.0 True False 15426.777290063921 17373.314442723386 20047.04867121969 14583.379755551743 13045.510964322237 13835.403968776216 16101.279592944875 15754.37151440646 10219.66105896931 12459.298870378454 14655.652939756978 1.0526161716217421 1.1854343517915942 1.367871411367641 0.9950685797144407 0.8901350910769151 0.9440319053437981 1.098639525589903 1.0749689269502927 0.6973187138763381 0.8501360479531836 1.0 13.839169624067194 -6.470594471020578 5.6937559138117395 0.8992000516297683 1.2001234059780344 0.43972173179511886 0.1266496178282661 0.1559860926344391 11.4443701734353 0.0220160022799147 0.051139050032458375 3.3838065674007496e-07 6.470594471020578 0.300923354348266 LCLS(ph)TVDLEVK ddPTM_A549_MK2206_60min_R1 1 LCLSTVDLEVK 11 0 Q8N370-4;Q8N370-2;Q8N370;Q8N370-3 Q8N370-4 SLC43A2 Large neutral amino acids transporter small subunit 4 1 LCLS(0.991)T(0.009)VDLEVK 105.17 0.00018032 13278000.0 1682.8 1927.7 1636.1 1150.7 2416.6 2124.4 1551.2 1891.0 2424.4 2666.2 2533.2 True False 1966.8154994900617 2025.8116961275796 1868.123581851321 1432.6215516568866 2061.1213412506613 2349.202597937408 1833.0329609419723 2159.0550409446205 1875.2772709712563 2063.903568243679 1904.1365272367022 1.0329172679357816 1.0639004436659032 0.9810869940940403 0.7523733362417653 1.0824440956666992 1.233736428210108 0.9626583675709871 1.1338761743507215 0.984843914366095 1.0839052445671171 1.0 10.894921208741694 -5.754029494509614 24.76871040163169 1.005513417482804 1.048408853486842 0.0 0.11602392499558017 610.4879571603082 2040588.7003111565 0.015269966819162675 0.05691950797631195 1.7618563883064563e-06 5.754029494509614 0.04289543600403811 LCLS(ph)TVDLEVK ddPTM_A549_PD325901_60min_R1 1 LCLSTVDLEVK 11 0 Q8N370-4;Q8N370-2;Q8N370;Q8N370-3 Q8N370-4 SLC43A2 Large neutral amino acids transporter small subunit 4 1 LCLS(0.857)T(0.143)VDLEVK 133.32 6.6964e-08 12828000.0 6646.4 8182.8 8132.0 7260.3 6842.6 7371.0 7722.2 7927.6 7650.7 7823.9 8722.4 True False 7321.137635178922 8872.393273539094 8683.886421688509 7708.7522416623515 6361.999381688498 7310.97301984726 8016.072546749985 7769.477798918115 7329.167685025926 7329.897618764875 7649.600095849216 0.9570614860182662 1.159850601648233 1.135207894906887 1.0077327108701057 0.8316773820817916 0.9557327086698689 1.0479073999044242 1.015671107190812 0.9581112206117597 0.958206641774932 1.0 12.90116861353725 -6.439495090444187 6.375016258085013 0.9752834173975344 1.0898585317760558 0.34436597187377016 0.06991203017247366 0.2033896961242508 12.796349092643045 0.00962327806616526 0.02248068857855829 3.6350041377508725e-07 6.439495090444187 0.11457511437852141 LCPSCPAS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 LCPSCPASSPK 11 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LCPSCPAS(0.724)S(0.276)PK 97.456 0.000279 16704000.0 1988.5 2521.9 2205.5 1656.7 2945.0 2745.6 2501.5 2138.9 3952.5 3216.6 3303.9 True False 2324.1101858426364 2650.2539380941776 2518.273063854954 2062.5915743720893 2511.794401217911 3036.137569618222 2955.9901700595306 2442.0956251065295 3057.2650608455256 2489.9678259742795 2483.4504469987937 0.9358391622636493 1.0671660235045006 1.014021869008195 0.8305346204369388 1.0114131345980228 1.2225480775295279 1.190275478873272 0.9833478369007762 1.2310553909139508 1.0026243241468185 1.0 11.278130245215243 -7.015018800359974 24.266809516615453 1.1151019214739477 0.9666137966222385 0.3194711583477302 0.09803647014209639 456.608226568635 737772.1202858945 0.01593336394539394 0.028235035219378642 9.660090601044087e-08 7.015018800359974 -0.14848812485170926 LCPSCPAS(ph)SPK ddPTM_A549_PD325901_60min_R1 3 LCPSCPASSPK 11 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LCPSCPAS(0.5)S(0.5)PK;LCPS(0.001)CPAS(0.5)S(0.5)PK;LCPSCPAS(0.586)S(0.414)PK 170.4 4.5898000000000005e-15 44367900.0 16479.4 17917.7 23034.5 16612.100000000002 15850.300000000001 15488.5 17177.8 19718.100000000002 12991.699999999999 16415.2 20484.699999999997 True False 18152.37655650691 19427.687461173624 24597.759687700956 17638.19168818357 14737.029608566518 15362.366791195818 17831.510579052836 19324.8070269498 12445.704028853737 15378.741470564435 17965.211763212235 1.0104181790764046 1.0814059815847055 1.3691884076796879 0.9817970375557549 0.8203092623012583 0.855117490051171 0.9925577729936264 1.0756793341296225 0.6927668982081849 0.8560289560324486 1.0 14.132918320619309 -6.512220151404909 20.079922095312998 0.8782638630659222 1.1512860406423382 0.42842348530803054 0.12715848278038058 28.811934841594518 54277.19821631287 0.021187693490142132 0.04655788960901283 3.074537883074253e-07 6.512220151404909 0.273022177576416 LCPSCPASS(ph)PK ddPTM_A549_MK2206_60min_R1 1 LCPSCPASSPK 11 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LCPSCPAS(0.086)S(0.914)PK 113.63 2.494e-05 10941000.0 1917.7 2181.9 2502.6 1953.8 3275.6 2993.9 2125.8 2328.2 4047.5 3232.4 3556.9 True False 2241.360876736447 2292.949390351594 2857.506311314172 2432.4810877094133 2793.7635791610805 3310.7125108100226 2512.0303431990997 2658.2294798134667 3130.7477125293517 2502.1985950007033 2673.623564554015 0.8383232802297382 0.8576186344071511 1.0687766031082353 0.9098068703307428 1.044935276678378 1.2382867037462995 0.9395602195098581 0.9942422392798157 1.1709755083085487 0.9358829074421675 1.0 11.38458063873165 -5.476647443810545 0.7455694379466992 1.0737064379502295 0.7157958952776702 0.277427245740533 0.10093896894979046 1.6087885770012473 0.7525244403132824 0.01603374239764537 0.44926092906645015 3.3369719509407966e-06 5.476647443810545 -0.3579105426725593 LCPSCPASS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LCPSCPASSPK 11 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LCPSCPAS(0.048)S(0.952)PK;LCPSCPAS(0.059)S(0.941)PK 176.8 3.7201e-41 8819000.0 1620.8 1991.1 2398.3 2026.4 1584.8 1756.7 2477.3 2242.4 1804.7 1642.8 2058.3 True False 1785.342422830103 2158.896984766058 2561.0630601494795 2151.5661257116917 1473.4891152631942 1742.3940176320286 2571.575007130574 2197.67357287123 1728.8547350133035 1539.0733276379974 1805.142148638728 0.9890314866208425 1.1959706255787663 1.4187597702933241 1.1919095276425764 0.8162731762561547 0.9652392300218472 1.424583105031268 1.2174518081739507 0.9577388330980176 0.85260505871996 1.0 10.817896733442897 -8.76938729318793 24.98392565730317 0.9800433252198961 1.1556797225294455 0.2173962266119882 0.17700647288151322 235.34972429296118 739809.5437501713 0.03126092185047531 0.033569810124056645 1.7006412417352359e-09 8.76938729318793 0.17563639730954939 LCS(ph)SS(ph)SSDTSSR ddPTM_A549_MK2206_60min_R1 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 LCS(0.931)S(0.187)S(0.412)S(0.335)S(0.072)DT(0.05)S(0.011)S(0.003)R 59.11600000000001 0.012302 3329000.0 420.94 472.48 493.59 784.54 586.23 641.51 433.54 609.87 889.92 937.32 916.79 True False 491.98438100507934 496.5272138747519 563.588484057205 976.752335219339 499.9963435741851 709.394162400126 512.3086061673426 696.3209401485435 688.3545409102209 725.5787610029876 689.1257408832062 0.7139254156643983 0.7205175839729718 0.8178311309847337 1.4173789734911093 0.725551686595502 1.0294117899165154 0.7434181830310839 1.0104410542785933 0.9988809009339908 1.0528974872902905 1.0 9.428623437142013 -6.012003968466779 24.734486592054488 0.9914223100400658 0.7302096037858882 0.3025713517433667 0.17048186855572114 415.15036566407554 855434.728810998 0.021087985141191985 0.05943693971025218 9.72738335113707e-07 6.012003968466779 -0.2612127062541776 LCS(ph)SS(ph)SSDTSSR ddPTM_A549_PD325901_60min_R1 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 LCS(0.961)S(0.129)S(0.499)S(0.39)S(0.012)DT(0.008)S(0.002)SR 71.176 0.0030451999999999996 5989200.0 669.37 727.78 931.1 845.31 1048.3 910.01 774.18 729.52 730.13 815.16 935.73 True False 737.3239496358507 789.112574744132 994.2900451591465 897.5228788616996 974.6710244386707 902.5991802728536 803.6418435475508 714.9691513026314 699.4451751954691 763.6906584839236 820.6411420811916 0.898473049701062 0.9615805670465151 1.2116015078619768 1.0936849651304732 1.187694565211355 1.0998707400701504 0.9792853445166915 0.871232399449813 0.8523155120173932 0.9306024513311161 1.0 9.680607673993737 -7.913098418467516 4.1817456863838895 0.9238570653750433 1.0819749158659617 0.409838825162654 0.09074882334798522 0.190721704538795 6.311391035254619 0.016136840980006027 0.02251707034517311 1.2215228110886572e-08 7.913098418467516 0.15811785049091842 LCS(ph)SSSSDTSSR ddPTM_A549_MK2206_60min_R1 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.988)S(0.011)S(0.001)SSDTSSR 166.7 7.3089e-15 67565000.0 1298.8 1474.1 1474.4 1421.4 1728.2 1464.5 1601.2 1375.3 2040.8 2069.9 2009.4 True False 1518.005687388693 1549.1253936098276 1683.4920903866437 1769.6430638090706 1473.9840693326964 1619.472417943577 1892.1173137314875 1570.252986679607 1578.5620584879302 1602.308152392017 1510.4105233812688 1.0050285428298138 1.025632018334916 1.1145924000965692 1.1716305179385753 0.9758830771603559 1.0722067893953477 1.2527172476895312 1.0396199989155082 1.0451211998669703 1.0608428156373158 1.0 10.560725006101254 -9.050248627858037 1.6329453640117124 1.0155454444809324 1.085700687667907 0.0682058329627514 0.07549139456568286 0.496021801112883 2.6928738607284495 0.015441232588648317 0.014908870024272637 8.907408547584458e-10 9.050248627858037 0.07015524318697453 LCS(ph)SSSSDTSSR ddPTM_A549_PD325901_60min_R1 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.325)S(0.325)S(0.325)S(0.023)S(0.002)DTSSR 244.16 6.5795e-51 64984000.0 5998.8 6436.6 7410.1 7603.4 6379.7 6576.6 6802.6 8550.4 6416.6 7807.6 9581.6 True False 6607.793759916846 6979.034871249668 7912.993946551166 8073.044749425719 5931.611880770191 6523.04235006478 7061.476665525554 8379.855564340964 6146.932616327569 7314.626803546644 8403.123942766772 0.7863496724458876 0.8305286127853763 0.9416728826619892 0.9607194662854904 0.7058817555435435 0.7762639697442134 0.8403394634686927 0.9972309847404028 0.731505646970579 0.8704651809691463 1.0 13.03671004813593 -11.073593613654742 1.3840474624694323 1.0002008000676417 0.8318140765470863 0.06637417218409691 0.09630677516770507 0.43630950412099906 1.4889901128062182 0.06805704469714435 0.014930928070716276 8.441242684361437e-12 11.073593613654742 -0.1683867235205554 LCSS(ph)SSSDTSSR ddPTM_A549_PD325901_60min_R1 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.092)S(0.454)S(0.454)S(0.001)SDTSSR 236.5 1.9399e-50 69666000.0 5184.7 5129.5 5571.3 5167.7 5775.3 4674.4 5448.8 5654.2 5031.6 5908.4 6613.1 True False 5711.046927225587 5561.780966981815 5949.401920948503 5486.897092301766 5369.662851703389 4636.333236192381 5656.157065697771 5541.422545365909 4820.139349860331 5535.34261566615 5799.730623894851 0.9847089972931005 0.958972291586667 1.0258065946092405 0.9460606790418484 0.9258469401286352 0.7994049270307002 0.9752447885069768 0.9554620558643336 0.8310971082004032 0.9544137434350098 1.0 12.501770178592633 -6.531301873416857 3.9216278012100303 0.9167331019766557 0.9871388362789872 0.213737835955505 0.05786735693224066 0.31402768141146237 10.863650963857559 0.010232677497041324 0.023278161603572108 2.942375709166091e-07 6.531301873416857 0.07040573430233155 LCSSS(ph)SSDTSSR ddPTM_A549_MK2206_60min_R1 1 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.005)S(0.056)S(0.761)S(0.046)S(0.116)DT(0.016)SSR 225.1 3.8016e-40 63915000.0 2924.2 2484.9 2650.0 2322.5 3343.9 2672.3 2246.4 2365.4 3516.4 3856.6 3295.8 True False 3417.7334701740224 2611.370796133954 3025.8098477513613 2891.5126042609863 2852.0167396375455 2955.0810122708235 2654.5418021274154 2700.70269373369 2719.9410145369275 2985.3913814749753 2477.3619005474216 1.3795858689111218 1.0540933868228621 1.2213838628432727 1.1671740828911796 1.1512313719716674 1.1928338009952606 1.0715195876471832 1.0901526713303038 1.0979183194574451 1.205068738974025 1.0 11.274588921913033 -2.0000000000245333 0.07761856222127407 0.8658905111851113 1.8592829122357635 0.14312623458864848 0.09133383079601835 90.30796015525014 0.49801753857292647 0.9787211534284536 9.658962924411224 0.009999999999435101 2.0000000000245333 0.9933924010506522 LCTKS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LCTKSPR 7 1 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 LCT(0.018)KS(0.982)PR 48.794 0.015666 17826000.0 2617.4 2661.4 2246.1 1961.4 2526.8 2051.6 2723.2 2529.2 1927.4 2302.2 2530.6 True False 2883.116521171959 2885.685518184113 2398.5338528965276 2082.5512233374006 2349.3262849867724 2034.892449805812 2826.8328661922174 2478.7531218809836 1846.3980807140476 2156.838699104091 2219.352242795107 1.2990801845591176 1.3002377281714457 1.0807359943348853 0.9383599336690169 1.0585639537903964 0.916885751872816 1.2737197870996964 1.1168813467659287 0.8319535966893873 0.971832527308831 1.0 11.115922946610684 -2.0000000802291438 0.34057010163144386 0.9415657356991746 5.444315829177889 0.3729165106952619 0.12206785283630059 35.18423242250484 0.4352106537497181 0.03685744724944906 102.39672457249874 0.009999998152655867 2.0000000802291438 4.502750093478714 LDAQSLNLSQEDFDRYMS(ph)GQTSPR ddPTM_A549_MK2206_60min_R1 3 LDAQSLNLSQEDFDRYMSGQTSPR 24 1 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4;Q3HKR1;A0A0A0MSJ3 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 LDAQSLNLS(0.06)QEDFDRY(0.22)MS(0.24)GQT(0.24)S(0.24)PR;LDAQSLNLS(0.014)QEDFDRY(0.231)MS(0.251)GQT(0.251)S(0.251)PR;LDAQSLNLS(0.031)QEDFDRY(0.225)MS(0.248)GQT(0.248)S(0.248)PR 51.645 0.0016945 17990200.0 2829.38 3156.7700000000004 3088.02 2916.08 3665.2 3053.96 2560.16 2926.34 4834.2 4137.6 4238.299999999999 True False 3306.9101723004474 3317.4361093451607 3525.9476702087404 3630.5197309078044 3126.053935261082 3377.1280201454206 3025.307932752191 3341.1576565403907 3739.2614186311025 3202.913286311998 3185.8131388707257 1.0380113422071726 1.0413153454822812 1.1067653740227157 1.139589666013718 0.981242087654009 1.060052135180317 0.9496187632098758 1.0487613400090157 1.1737227689244063 1.0053675927293506 1.0 11.63744593397023 -8.564595349387464 24.9960086691468 1.083572911905801 1.0456114744916831 0.0 0.06567272174832367 383.3352218154234 229687.09167712624 0.013177362866897862 0.014941729481361871 2.7252393467307214e-09 8.564595349387464 -0.03796143741411795 LDAQSLNLSQEDFDRYMS(ph)GQTSPR ddPTM_A549_PD325901_60min_R1 1 LDAQSLNLSQEDFDRYMSGQTSPR 24 1 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4;Q3HKR1;A0A0A0MSJ3 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 LDAQSLNLS(0.004)QEDFDRY(0.234)MS(0.254)GQT(0.254)S(0.254)PR 60.765 0.0001006 9361400.0 1750.6 1846.1 1661.5 1701.3 1839.5 1842.3 1584.5 1673.2 1922.9 1738.4 1930.9 True False 1928.319623276393 2001.6773258885123 1774.2593814111497 1806.38543706736 1710.2998659304938 1827.296919612619 1644.7990145716685 1639.8267133999925 1842.087200064876 1628.6371273228003 1693.41154098359 1.138718838632906 1.182038315816527 1.0477425826332805 1.0667137865483962 1.0099729596369083 1.0790625169303287 0.9712931409551598 0.9683568782385447 1.0877965311343811 0.9617491601461707 1.0 10.725716911164971 -5.808748081109138 6.233682172044898 1.0347917659284196 1.1603551922562778 0.572216976299833 0.04518166842061804 0.0960995933882143 8.682784705729276 0.006163768417428978 0.02006680418805545 1.5532877560567517e-06 5.808748081109138 0.12556342632785822 LDAQSLNLSQEDFDRYMSGQT(ph)SPR ddPTM_A549_PD325901_60min_R1 5 LDAQSLNLSQEDFDRYMSGQTSPR 24 1 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4;Q3HKR1;A0A0A0MSJ3 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 LDAQSLNLS(0.002)QEDFDRY(0.019)MS(0.091)GQT(0.444)S(0.444)PR;LDAQSLNLS(0.076)QEDFDRY(0.043)MS(0.049)GQT(0.473)S(0.359)PR;LDAQSLNLS(0.001)QEDFDRY(0.05)MS(0.064)GQT(0.482)S(0.403)PR;LDAQSLNLSQEDFDRY(0.001)MS(0.081)GQT(0.505)S(0.414)PR;LDAQSLNLS(0.001)QEDFDRY(0.079)MS(0.086)GQT(0.417)S(0.417)PR 70.64699999999999 4.514399999999999e-05 99418900.0 7953.7 7538.5 8244.0 8339.8 8538.099999999999 9102.0 8442.0 9284.4 9598.3 8561.9 9401.1 True False 8761.153768795526 8173.795851368052 8803.487415199223 8854.930504939974 7938.413310845954 9027.87632975848 8763.26492963966 9099.215358529103 9194.916829987365 8021.3001728170075 8244.824298482996 1.0626246784188635 0.991385086626041 1.06775925071187 1.0739986911023967 0.9628359590763602 1.094974981021677 1.0628807373435543 1.1036275642894309 1.1152350246783527 0.972889158389086 1.0 13.009273034066712 LDAQSLNLSQEDFDRYMSGQTS(ph)PR ddPTM_A549_MK2206_60min_R1 1 LDAQSLNLSQEDFDRYMSGQTSPR 24 1 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4;Q3HKR1;A0A0A0MSJ3 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 LDAQSLNLS(0.02)QEDFDRY(0.219)MS(0.239)GQT(0.239)S(0.283)PR 44.632 0.0082789 3148500.0 827.2 1108.4 1280.9 937.91 1508.3 1201.5 1189.5 1005.0 1449.3 1626.5 2075.8 True False 966.8111369016996 1164.8128256408206 1462.5508807489507 1167.6979921043794 1286.4310680329288 1328.6419325088486 1405.6167528626072 1147.4618276834185 1121.035864056526 1259.0725203466902 1560.3215708344967 0.6196230027023379 0.7465210040119175 0.937339397267157 0.7483700885323703 0.8244653487325149 0.8515180186852507 0.900850683049168 0.7354008616760511 0.7184646325545379 0.8069314325208672 1.0 10.607627673261657 -10.892884040555892 1.114866808135857 1.001334245037441 0.7882155914114348 0.05905833967384155 0.10152136388534078 0.377654214732341 0.825111877436377 0.06288344554512462 0.014676338572354754 1.2797229528747701e-11 10.892884040555892 -0.21311865362600613 LDDGHLNNS(ph)LS(ph)SPVQADVYFPR ddPTM_A549_PD325901_60min_R1 1 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 2 LDDGHLNNS(0.664)LS(0.664)S(0.664)PVQADVY(0.007)FPR 41.798 0.014988 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LDDGHLNNS(ph)LSS(ph)PVQADVYFPR ddPTM_A549_PD325901_60min_R1 1 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 2 LDDGHLNNS(0.777)LS(0.444)S(0.776)PVQADVY(0.004)FPR 44.6 0.01346 1436700.0 309.58 359.85 155.85 384.79 334.6 395.18 561.74 557.42 484.37 448.32 517.0 True False 341.00833369924936 390.175822393685 166.4269182021833 408.55760437850427 311.098850307335 391.96178510151134 583.117323095923 546.3018208124694 464.013613342048 420.0129986892303 453.41227753302354 0.7520932947705912 0.8605321067100288 0.36705428249031447 0.9010730953326416 0.6861279804772746 0.864471044397256 1.2860642554026398 1.204867728295426 1.0233812279338914 0.9263379478263893 1.0 8.824679646791209 -7.527044247443815 24.72794933652334 1.048892648198081 0.7189950184584044 0.5534944123597745 0.15893474024461005 64.44570970267311 382571.8701178111 0.02349498868793095 0.034932790995600475 2.9713632834112087e-08 7.527044247443815 -0.3298976297396765 LDDS(ph)SEAKGPEDYPEEGVEESSGEASK ddPTM_A549_MK2206_60min_R1 2 LDDSSEAKGPEDYPEEGVEESSGEASK 27 1 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 LDDS(0.819)S(0.18)EAKGPEDY(0.001)PEEGVEESSGEASK;LDDS(0.797)S(0.203)EAKGPEDYPEEGVEESSGEASK 84.478 4.0738e-07 8617900.0 1300.15 1482.66 1526.44 1759.8400000000001 2019.65 1722.71 1660.35 1593.9099999999999 2506.9 2562.5 2615.6 True False 1519.5835343843619 1558.1210610471119 1742.9121449062588 2191.0008790022184 1722.5621604141775 1905.0060287576523 1962.0141030814864 1819.8516236446524 1939.0911526966836 1983.6294702664582 1966.0743331123967 0.7729023815588819 0.7925036377340454 0.8864935142849555 1.114403887025854 0.8761429470915645 0.9689389646534523 0.9979348542613428 0.9256270696356296 0.9862756051684997 1.0089290302296305 1.0 10.941102152620003 -5.949039176278437 3.917514954456589 0.9857402659611814 0.7855014881673618 0.6636577685688035 0.05582398719112819 0.0851514216157708 2.7247068787089175 0.007027755984495655 0.023503260346133356 1.1245035316223168e-06 5.949039176278437 -0.2002387777938196 LDDS(ph)SEAKGPEDYPEEGVEESSGEASK ddPTM_A549_PD325901_60min_R1 1 LDDSSEAKGPEDYPEEGVEESSGEASK 27 1 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 LDDS(0.959)S(0.04)EAKGPEDY(0.001)PEEGVEESSGEASK 69.482 6.0616000000000004e-05 4709900.0 1037.8 981.66 1103.9 1264.8 1449.1 1169.0 1293.2 1096.3 1551.7 918.34 1429.5 True False 1143.1566920120188 1064.3879333360696 1178.8172922899598 1342.9238234307866 1347.3202151236092 1159.4800515807142 1342.4134336661937 1074.4334364692875 1486.487445182104 860.3558556751155 1253.680562347114 0.911840485005068 0.8490104778711296 0.9402852111569819 1.071185008178314 1.0746917959716829 0.9248608348923911 1.0707778950907207 0.8570232870626598 1.1856987256778824 0.6862640145463975 1.0 10.291954081107374 -5.563636030470984 0.4899935833842481 1.0698345281331938 0.7615484951762473 0.0 0.1466506018965829 3.188189976007777 0.6079838481083646 0.020946042077346544 0.5317028382459058 2.7312658180677735e-06 5.563636030470984 -0.30828603295694645 LDEDEDEDDADLSKYNLDAS(ph)EEEDSNKKK ddPTM_A549_MK2206_60min_R1 1 LDEDEDEDDADLSKYNLDASEEEDSNKKK 29 3 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 LDEDEDEDDADLSKYNLDAS(1)EEEDSNKKK 194.37 8.611199999999999e-78 43627000.0 2542.9 3032.6 2536.6 2347.3 3144.1 2896.1 2387.3 2386.2 3322.1 3949.0 3943.1 True False 2972.079352063991 3186.946386718108 2896.3280225683393 2922.3886053743 2681.6070549640867 3202.5633797244072 2821.0415082882737 2724.451157431017 2569.649654303583 3056.9181573003857 2963.9194459762534 1.002753079574688 1.0752473016918966 0.9771952562679547 0.9859878645965446 0.9047503158712943 1.0805163359186873 0.9517942574714885 0.9192055341212687 0.8669768869029413 1.03137693618846 1.0 11.533290522970535 -7.981721276952884 24.97645057993787 0.9341476209795552 1.002285083647417 0.11612735369742178 0.06058593585737957 294.2056036511671 402007.9196536813 0.009935220835637845 0.01372629314638385 1.0429865862599872e-08 7.981721276952884 0.06813746266786191 LDEDEDEDDADLSKYNLDAS(ph)EEEDSNKKK ddPTM_A549_PD325901_60min_R1 1 LDEDEDEDDADLSKYNLDASEEEDSNKKK 29 3 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 LDEDEDEDDADLSKYNLDAS(1)EEEDSNKKK 198.48 1.007e-77 20146000.0 3216.9 2874.1 3227.6 2693.4 3391.6 3129.7 3419.8 3524.2 3463.7 4056.0 4227.8 True False 3543.4773198433836 3116.310493654825 3446.644345135494 2859.765200844782 3153.385716384812 3104.212760848727 3549.9423603863643 3453.9070663185835 3318.1327343412095 3799.903467798712 3707.8074022323367 0.955679984270484 0.8404725908305289 0.9295640175539847 0.7712820248222766 0.8504718218336456 0.8372098181204862 0.957423613278584 0.9315227819651881 0.8949042855741325 1.024838416771844 1.0 11.856350591446263 -7.767274521562686 24.98665219274706 0.9478781663756908 0.8611741445008109 0.41919204144094613 0.05609320353437491 119.08329144064018 509926.81714110734 0.008830862740382995 0.012378105673639315 1.708934740135086e-08 7.767274521562686 -0.08670402187487991 LDEGT(ph)PPEPK ddPTM_A549_MK2206_60min_R1 2 LDEGTPPEPK 10 0 Q9Y4G6;A0A1B0GVU7;H0YMT1;H0YN01 Q9Y4G6 TLN2 Talin-2 1 LDEGT(1)PPEPK;LDEGT(1)PPEPK 115.33 9.446e-05 114600000.0 10510.0 10956.2 10316.9 8845.1 14175.7 11924.1 11287.6 11458.4 14772.0 14897.5 14865.0 True False 12283.83105517029 11513.823782286148 11779.991554062653 11012.149897071631 12090.473308436243 13185.900347423014 13338.410810939016 13082.663289878281 11426.165586036708 11532.144403236898 11173.610246870996 1.0993609749910684 1.030447950832223 1.0542690584148007 0.9855498494907159 1.0820561162693143 1.1800930993736363 1.1937422655917536 1.1708537349011154 1.0226028413006831 1.0320875839092656 1.0 13.447807782355753 -8.931057937223674 11.057147133975237 1.0099533525502535 1.0972181771876581 0.2581427876319584 0.06120306382916143 0.5213893455960725 81.30552250308827 0.011887422884368108 0.012639545871487636 1.1720389988014078e-09 8.931057937223674 0.08726482463740459 LDEGT(ph)PPEPK ddPTM_A549_PD325901_60min_R1 2 LDEGTPPEPK 10 0 Q9Y4G6;A0A1B0GVU7;H0YMT1;H0YN01 Q9Y4G6 TLN2 Talin-2 1 LDEGT(1)PPEPK;LDEGT(1)PPEPK 93.345 0.00063698 156064000.0 20956.1 20911.0 21450.3 20306.6 26149.0 17837.3 19949.7 19106.8 21578.2 22709.0 23632.0 True False 23083.547844934546 22673.24335716087 22906.046349132455 21560.892562365294 24312.384449152752 17692.038942737974 20708.896750394713 18725.699885005368 20671.34329421182 21275.149864457813 20725.41381559075 1.1137798284910425 1.093982661041241 1.1052153917381047 1.0403118004884444 1.173071122510649 0.8536398404469535 0.9992030525738593 0.9035139202344374 0.9973911005174596 1.026524732087787 1.0 14.339113287241064 -7.243699667837367 24.992354797488623 0.9817672291048429 1.1010328993398437 0.604563008931307 0.056027791232996164 485.14423099398084 683489.1857208076 0.007728768210653798 0.01336825639476045 5.705587002529284e-08 7.243699667837367 0.11926567023500079 LDEILK ddPTM_A549_MK2206_60min_R1 1 LDEILK 6 0 H0YHL7;B4E3S0;Q9ULV4;Q9ULV4-2;Q9ULV4-3 H0YHL7 CORO1C Coronin;Coronin-1C 0 72.234 0.044889 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LDFIESDS(ph)PCSSEALSK ddPTM_A549_MK2206_60min_R1 2 LDFIESDSPCSSEALSK 17 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIES(0.01)DS(0.965)PCS(0.012)S(0.012)EALSK;LDFIES(0.014)DS(0.842)PCS(0.124)S(0.019)EALSK 131.24 4.3111e-12 6310300.0 1715.8899999999999 1912.31 1989.67 1330.93 2470.54 2135.6000000000004 2008.31 1679.49 2784.2 2454.2 2672.8 True False 2005.4902825172362 2009.6384108635855 2271.8351244435667 1657.0079097477187 2107.126838704548 2361.5877745034522 2373.193931014293 1917.5628507224128 2153.583145453791 1899.7945154840759 2009.0699944727069 0.9982182243698233 1.0002829251307532 1.1307894352579906 0.8247636539824044 1.0488070821333313 1.1754631650468037 1.1812400451668448 0.9544529837178168 1.0719303714547848 0.9456089238855458 1.0 10.972312112008353 -6.948710526493792 24.999903827241386 1.0517644487849291 0.9916755013646965 0.0949462995753847 0.09686879069495832 213.5653868162501 104096.4442917212 0.013374976399910362 0.025276327762731764 1.1253548150908553e-07 6.948710526493792 -0.06008894742023263 LDFIESDS(ph)PCSSEALSK ddPTM_A549_PD325901_60min_R1 2 LDFIESDSPCSSEALSK 17 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIES(0.001)DS(0.98)PCS(0.017)S(0.003)EALSK;LDFIES(0.001)DS(0.86)PCS(0.117)S(0.022)EALSK 236.43 7.5905e-74 9769000.0 4470.9 4071.7 4740.0 4852.4 3628.0 4296.5 4728.2 4930.1 3640.7 4146.0 4728.3 True False 4924.782476697374 4414.836448632395 5061.684903935509 5152.1217274000255 3373.1817959205378 4261.510728500033 4908.134238370318 4831.765287911371 3487.6940398752913 3884.2208524392136 4146.74907516324 1.1876249050597558 1.0646500110351147 1.2206393037505534 1.2424483936726285 0.8134521126740106 1.0276750898732099 1.1836101363758318 1.165193552908953 0.8410670567854398 0.9366905935311043 1.0 12.0177650353132 -7.552355814746174 0.5175892488876458 0.9338318938305042 1.1649127172655753 0.1938104075182956 0.12990854402515062 1.014694572984286 0.5387069797782901 0.037530401375184735 0.09432612523976296 2.8031361050667255e-08 7.552355814746174 0.23108082343507108 LDFIESDS(ph)PCSSEALSKK ddPTM_A549_PD325901_60min_R1 1 LDFIESDSPCSSEALSKK 18 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIES(0.146)DS(0.689)PCS(0.134)S(0.02)EALS(0.011)KK 101.94 3.0295e-09 3738000.0 2434.0 2022.1 2468.4 2691.7 2606.3 2933.8 2539.8 2624.1 2322.1 2363.1 2634.0 True False 2681.097888183905 2192.509463560567 2635.9204676950235 2857.960195705764 2423.2424792468832 2909.9081054982908 2636.453478831889 2571.760266933374 2224.510212320271 2213.8934627108315 2310.0346983017107 1.1606310027096096 0.9491240392070536 1.141073971587049 1.2371936221593887 1.0490069612497166 1.2596815570076045 1.1413047088730548 1.1132994101015359 0.9629769691146564 0.9583810426477316 1.0 11.173698806732789 -8.712149105041078 5.774707488745371 0.9824884412246702 1.131921720313568 0.4355888193124109 0.07985746546478056 0.13407058865042298 10.001902154410459 0.013300605791832629 0.014967153717772463 1.9402196333563577e-09 8.712149105041078 0.14943327908889792 LDFS(ph)VR ddPTM_A549_MK2206_60min_R1 1 LDFSVR 6 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 1 LDFS(1)VR 63.48 0.059868 1631400.0 504.35 445.13 356.91 200.01 459.38 489.7 350.1 294.32 393.69 399.49 409.84 True False 589.4719498263684 467.785215696047 407.5252048154484 249.01245897879005 391.80581053700615 541.5197289634484 413.70863823219696 336.04076131719756 304.5198435937443 309.2449315421452 308.0654169914301 1.9134635610292037 1.518460657689013 1.3228528174156762 0.8083103303533652 1.2718266605949657 1.7578075924650531 1.3429246368270726 1.0908097526784246 0.9884908425219816 1.003828779491818 1.0 8.267092926240585 -2.0000000000000004 0.24602936307021275 0.984091383927473 5.717654125328578 0.41397509480816996 0.2517768496413769 33.1147389201424 0.4002462288506944 0.13203653533500043 65.55765863870423 0.00999999999999999 2.0000000000000004 4.733562741401105 LDFS(ph)VR ddPTM_A549_PD325901_60min_R1 1 LDFSVR 6 0 Q86VR2;K7EQI9;Q86VR2-2 Q86VR2 FAM134C Protein FAM134C 1 LDFS(1)VR 63.48 0.059868 1773300.0 639.35 886.52 500.74 573.5 720.3 532.19 777.89 761.28 540.5 709.55 743.99 True False 704.2563413354062 961.230151642211 534.7232275942332 608.9237924869985 669.7086129001004 527.8560210870322 807.4930296277415 746.0956731873933 517.7846646393807 664.7488919074392 652.4839465411884 1.0793466185163065 1.4731859024849323 0.8195193620146461 0.9332395007032711 1.0263986055905587 0.808994648657936 1.2375676580370365 1.1434697775208722 0.7935592398619961 1.018797313606361 1.0 9.349798596391611 -5.76955971783397 24.999859751381898 0.939021748600011 1.2762662861137493 0.3275167784434806 0.15914013937443805 116.50299691402721 358679.22422168934 0.022107661962576304 0.07048105331577738 1.699966183050095e-06 5.76955971783397 0.3372445375137383 LDGLLEENS(ph)FDPSK ddPTM_A549_PD325901_60min_R1 1 LDGLLEENSFDPSK 14 0 Q13352-4;Q13352-3;Q13352-2;Q13352;Q13352-5 Q13352-4 ITGB3BP Centromere protein R 1 LDGLLEENS(0.998)FDPS(0.002)K 105.14 2.1952e-05 1021500.0 1578.9 1584.2 1257.2 1589.8 1582.0 1561.9 1548.6 1351.4 1373.5 1293.3 1645.6 True False 1739.1887656752538 1717.706093750384 1342.5211521577467 1687.998335302233 1470.8857776037182 1549.1804042462954 1607.5328204264358 1324.4452668472097 1315.7765714749112 1211.640817284041 1443.2016323178802 1.2050906309480804 1.1902052043771811 0.9302381054001208 1.1696205835016917 1.0191824514786443 1.0734331014843754 1.1138657166321442 0.917713254467472 0.9117066818734706 0.8395506145167417 1.0 10.495057160113847 -8.256925349182374 24.86247028364341 0.9540965003592635 1.0956764196438855 0.502802403347135 0.08462226873288915 259.8134951999915 1431007.232319993 0.012610558895482403 0.01599544389704308 5.534452326635985e-09 8.256925349182374 0.141579919284622 LDGLVET(ph)PTGYIESLPR ddPTM_A549_MK2206_60min_R1 1 LDGLVETPTGYIESLPR 17 0 P55209;F8W118;P55209-2;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8W020;F8VRJ2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVET(0.863)PT(0.136)GYIESLPR 273.44 1.3414999999999996e-100 102010000.0 42894.0 48993.0 49211.0 36740.0 66717.0 55860.0 52220.0 48696.0 74913.0 67658.0 69220.0 True False 50133.45854238574 51486.534433977584 56189.85978026121 45741.30164932127 56903.01767947547 61771.06812313297 61707.69805337142 55598.807125245505 57945.32511147899 52374.01080947831 52030.7636251874 0.9635349368218152 0.9895402420934994 1.0799353279731696 0.8791203215625787 1.0936417941006247 1.1872027973318158 1.18598486268419 1.0685756512389695 1.1136743163890146 1.0065970045483774 1.0 15.667077260613556 -6.849039781492911 23.30849824763893 1.0787337333406746 0.9860612807275112 0.3611613371103345 0.07197626827990197 14.36842125849183 3818.2370864745853 0.01153311304374948 0.021795553543771565 1.4156640988004636e-07 6.849039781492911 -0.09267245261316337 LDGLVET(ph)PTGYIESLPR ddPTM_A549_PD325901_60min_R1 1 LDGLVETPTGYIESLPR 17 0 P55209;F8W118;P55209-2;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8W020;F8VRJ2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVET(0.5)PT(0.5)GYIESLPR 301.9 1.7266999999999995e-151 214970000.0 10319.0 10361.0 10511.0 10691.0 12718.0 11748.0 10769.0 12107.0 12145.0 12599.0 12906.0 True False 11366.577283553706 11234.157831932669 11224.339667777664 11351.358788977343 11824.731554718142 11652.328183036985 11178.82018802292 11865.516387242238 11634.587885375176 11803.496989841213 11318.643817874676 1.0042349124550887 0.9925356794240151 0.9916682465130597 1.0028903613921487 1.0447127540177774 1.0294809493550232 0.9876466092491627 1.0483160861112997 1.0279135974754814 1.0428366843031889 1.0 13.466413486620493 -6.536051363583143 24.98200580592563 1.0175177913921412 0.9960342274581931 0.28503917861676664 0.018776316370504822 268.16625830884675 508578.19343695947 0.002664006502375075 0.005547789026169142 2.9103728907591443e-07 6.536051363583143 -0.021483563933948013 LDGLVETPT(ph)GYIESLPR ddPTM_A549_MK2206_60min_R1 1 LDGLVETPTGYIESLPR 17 0 P55209;F8W118;P55209-2;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8W020;F8VRJ2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVET(0.226)PT(0.774)GYIESLPR 311.24 5.238699999999998e-152 36816000.0 10909.0 10062.0 9296.6 10187.0 14097.0 10657.0 11357.0 10020.0 16300.0 14567.0 16457.0 True False 12750.172500556866 10574.11282172315 10614.99767192653 12682.815457311808 12023.349974182986 11784.71666645593 13420.419892610867 11440.365684963039 12608.07602575131 11276.30458277912 12370.272709906221 1.030710704570516 0.8548002998555811 0.8581053886892848 1.0252656311412844 0.9719551263049021 0.9526642575162169 1.0848928077279718 0.9248272817624704 1.0192237731068494 0.9115647526306317 1.0 13.594589685271371 -6.27225107698962 24.63462165046536 1.0028425492466861 0.9085649464880492 0.16342632084235442 0.06449649123030948 443.2227144379882 1009890.4717771038 0.007467839286780881 0.01751641919427321 5.342554030872343e-07 6.27225107698962 -0.09427760275863695 LDGLVETPT(ph)GYIESLPR ddPTM_A549_PD325901_60min_R1 1 LDGLVETPTGYIESLPR 17 0 P55209;F8W118;P55209-2;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8W020;F8VRJ2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVET(0.089)PT(0.911)GYIESLPR 364.82 1.5002999999999992e-245 137780000.0 37718.0 39127.0 38775.0 38726.0 46566.0 40635.0 40968.0 43257.0 40398.0 45481.0 46510.0 True False 41547.103593475935 42424.369606218446 41406.50467301673 41118.017066872766 43295.36480397896 40304.08203249132 42527.059658549784 42394.20520053999 38700.21254782926 42609.32189816401 40789.5648511817 1.0185718760437399 1.0400789947380227 1.0151249424720734 1.0080523589032981 1.0614323776666783 0.988097867176038 1.0425965516844131 1.0393394819290847 0.9487772838230729 1.0446132988577246 1.0 15.315912495888249 -8.751437990290233 24.999670068021963 0.9758114944383377 1.0265088843881196 0.03585238807540003 0.029978022535054542 129.67835896737853 324146.3784315322 0.004155110941093316 0.004684510149795098 1.7724010951647976e-09 8.751437990290233 0.0506973899497819 LDHEGVT(ph)SPK ddPTM_A549_MK2206_60min_R1 2 LDHEGVTSPK 10 0 H9KVB4;O15417;H7BXS9;F8WBW8;Q9P281 H9KVB4 TNRC18;BAHCC1 Trinucleotide repeat-containing gene 18 protein;BAH and coiled-coil domain-containing protein 1 1 LDHEGVT(0.59)S(0.41)PK;LDHEGVT(0.989)S(0.011)PK 111.26 0.00014718 49105000.0 5327.299999999999 5167.5 5223.0 4141.3 6066.5 5058.700000000001 5040.0 4815.5 7440.1 7415.299999999999 7020.9 True False 6226.418000019856 5430.503677822932 5963.699937662398 5155.91868591002 5174.125886243959 5594.008276306708 5955.702761183303 5498.111871850247 5754.929229398303 5740.178579850484 5277.416763017595 1.1798230610954492 1.0290079259758524 1.1300414967137047 0.9769777369187528 0.98042775823629 1.0599898638871355 1.1285261385681937 1.0418187758789887 1.0904822354995645 1.0876871843959286 1.0 12.365616203799892 -10.915427353094785 1.1321415844021658 0.9994688870665672 1.0667674755409577 0.0 0.06462123290135258 0.7922639536133467 1.7801980286494197 0.04234420557456466 0.009707406647645472 1.2149898417269458e-11 10.915427353094785 0.06729858847439052 LDHEGVT(ph)SPK ddPTM_A549_PD325901_60min_R1 2 LDHEGVTSPK 10 0 H9KVB4;O15417;H7BXS9;F8WBW8;Q9P281 H9KVB4 TNRC18;BAHCC1 Trinucleotide repeat-containing gene 18 protein;BAH and coiled-coil domain-containing protein 1 1 LDHEGVT(0.938)S(0.062)PK;LDHEGVT(0.994)S(0.006)PK 99.539 0.00041975 61286000.0 5527.5 5594.1 5276.8 6459.0 6061.9 5746.299999999999 5820.0 4883.8 5956.200000000001 6519.3 6764.6 True False 6088.647730869568 6065.534439495662 5634.915379976135 6857.957760546687 5636.1330564197115 5699.504037979695 6041.483284826202 4786.388777733016 5705.881627243442 6107.670285409304 5932.597084332481 1.0263039347386667 1.0224079527521357 0.9498226998859404 1.1559790194850768 0.9500279517219014 0.9607097797070415 1.0183538843015787 0.8067948505003801 0.961784787696475 1.029510381134626 1.0 12.53444808934199 LDHINFPVFEPSTPDPAPAKNES(ph)SPAPPDSDADKLK ddPTM_A549_MK2206_60min_R1 1 LDHINFPVFEPSTPDPAPAKNESSPAPPDSDADKLK 36 2 Q8ND04;Q8ND04-2;J3KTD7 Q8ND04 SMG8 Protein SMG8 1 LDHINFPVFEPSTPDPAPAKNES(0.499)S(0.499)PAPPDS(0.001)DADKLK 95.25200000000001 9.816799999999999e-10 4237600.0 722.96 1075.3 910.41 663.54 1457.3 988.36 866.95 783.34 1211.2 1203.9 1501.1 True False 844.9779733250149 1130.028177022352 1039.519827732572 826.1073297874424 1242.9331004736368 1092.9475991797303 1024.4635930174336 894.3808438781384 936.8651338889559 931.9381538551371 1128.335441747598 0.7488712505709197 1.0015002057119933 0.9212861612523081 0.7321469300901724 1.1015634664001572 0.9686371257530846 0.907942403573458 0.7926551012993936 0.8303072820595909 0.8259406904844935 1.0 10.139980313572188 -11.016692478197669 1.3446198551982407 0.9991619614602107 0.8881594937220777 0.0 0.11712962031178412 0.7231605255529289 2.357096588260259 0.07126298219199735 0.0166600780325297 9.622934324757048e-12 11.016692478197669 -0.11100246773813305 LDHINFPVFEPSTPDPAPAKNES(ph)SPAPPDSDADKLK ddPTM_A549_PD325901_60min_R1 2 LDHINFPVFEPSTPDPAPAKNESSPAPPDSDADKLK 36 2 Q8ND04;Q8ND04-2;J3KTD7 Q8ND04 SMG8 Protein SMG8 1 LDHINFPVFEPSTPDPAPAKNES(0.5)S(0.5)PAPPDSDADKLK;LDHINFPVFEPSTPDPAPAKNES(0.5)S(0.5)PAPPDS(0.001)DADKLK 135.59 4.652e-30 21191700.0 2980.6 2887.8 2908.0 3310.3999999999996 4265.6 3991.2 3751.1 3985.9 3837.2000000000003 3423.9 3792.4 True False 3283.1883177982495 3131.1650407349803 3105.3543672245687 3514.875889536113 3965.998971521127 3958.6969904781436 3893.850163180683 3906.3980976219414 3675.9358282224475 3207.7143696735698 3325.958842004331 0.9871403928196818 0.9414322874927816 0.9336719168037513 1.0568007773114638 1.1924377780727697 1.1902423266586497 1.1707451439279153 1.1745178708428692 1.1052258920940852 0.9644480049369754 1.0 11.699554600369758 -6.3622951621952515 4.74984760844384 1.0897478489767978 0.9532813034496017 0.4498264051702856 0.0740728753680198 0.19749235148145572 7.2033441813397125 0.012005060939096795 0.02874273430353552 4.342150156786258e-07 6.3622951621952515 -0.13646654552719606 LDHINFPVFEPSTPDPAPAKNESS(ph)PAPPDSDADKLK ddPTM_A549_MK2206_60min_R1 1 LDHINFPVFEPSTPDPAPAKNESSPAPPDSDADKLK 36 2 Q8ND04;Q8ND04-2;J3KTD7 Q8ND04 SMG8 Protein SMG8 1 LDHINFPVFEPSTPDPAPAKNES(0.163)S(0.829)PAPPDS(0.008)DADKLK 103.14 1.8372999999999998e-14 4865400.0 584.07 720.6 929.65 908.34 1315.2 668.03 885.22 947.23 1346.4 1145.2 1069.4 True False 682.6467368594971 757.2754620685448 1061.4883490422844 1130.883340776932 1121.7358222349044 738.7204911975742 1046.0530155267227 1081.502753270213 1041.442549758991 886.4985246240581 803.8384660614759 0.8492337275226758 0.9420741778866676 1.3205244509424907 1.4068539744282957 1.3954741774563404 0.9189912182444357 1.3013224169925737 1.3454229909762765 1.295586854485443 1.102831678319137 1.0 9.650761806072001 -5.628793553073897 5.648995200390298 1.1955619785835172 0.8722243878981943 0.39633596367738644 0.15620861162293767 0.17675257373865685 7.9620925585396085 0.02458072868639077 0.09949578417192365 2.3507500116133662e-06 5.628793553073897 -0.32333759068532286 LDHKFDLMYAK ddPTM_A549_MK2206_60min_R1 3 LDHKFDLMYAK 11 1 Q9BQE3;F5H5D3;Q9NY65;C9J2C0;Q9NY65-2;V9GZ17;A6NHL2-2;A6NHL2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P68363-2;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA8;TUBAL3;TUBA1A;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ;; 91.03 0.00011643 14406500.0 2492.3900000000003 2981.2200000000003 2906.19 2904.49 4775.85 3199.42 2795.66 2781.4700000000003 4850.47 4241.17 3788.59 False True 2913.0444989149273 3132.9513641798335 3318.33144205152 3616.090180387511 4073.3287915302412 3537.9805007968866 3303.595234390814 3175.751890394623 3751.8462896089536 3283.0867513795083 2847.778543235317 1.0229181991116003 1.1001386928846426 1.165235074171749 1.2697933232825496 1.4303530733476892 1.2423650389532894 1.1600604415811246 1.1151681362086183 1.3174642032896768 1.1528588693029636 1.0 11.475621244520273 -10.995946575797651 1.2496741398571225 0.9990341359111635 1.2162172544607932 0.09589390105272289 0.11558003574806679 0.45382124444519784 1.2520082218390616 0.08444132478551973 0.01892101945016909 1.0093770457175514e-11 10.995946575797651 0.21718311854962968 LDHKFDLMYAK ddPTM_A549_PD325901_60min_R1 3 LDHKFDLMYAK 11 1 Q9BQE3;F5H5D3;Q9NY65;C9J2C0;Q9NY65-2;V9GZ17;A6NHL2-2;A6NHL2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P68363-2;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA8;TUBAL3;TUBA1A;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ;; 112.15 2.0425e-05 30693600.0 5472.3 5414.599999999999 6157.5 5897.9 6543.599999999999 7449.8 6997.5 7231.6 7243.5 6583.3 6530.1 False True 6027.843867505661 5870.907344540349 6575.384978055461 6262.199887897244 6084.000110194495 7389.1312987733145 7263.793691678924 7087.360064919546 6939.080884949783 6167.62931448699 5726.939097714504 1.0525419887756868 1.0251387773415122 1.1481499743343793 1.0934636777255673 1.0623476182281189 1.290240942447276 1.2683553234532816 1.2375476574821542 1.2116561336786378 1.0769503934393776 1.0 12.483548546079966 -5.761410142142908 24.999995606348143 1.134368022500686 1.0388403589515405 0.17225137407205338 0.08926239294845272 1.3668820083030255 1161536.7901656565 0.015502081382462741 0.053252865741507706 1.732167388396714e-06 5.761410142142908 -0.09552766354914555 LDHLAEK ddPTM_A549_MK2206_60min_R1 2 LDHLAEK 7 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;O43707;O43707-2 P12814-4;O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 0 ; 81.119 0.016725 24375000.0 5195.1 6259.5 5369.6 4255.4 7264.200000000001 5879.299999999999 4976.6 4953.299999999999 8089.4 8570.2 7632.200000000001 False True 6071.905871999542 6578.081813513819 6131.090022070077 5297.973191032163 6195.645802827555 6501.443623636517 5880.783801846196 5655.445443845051 6257.163816117336 6634.185867737604 5736.914101995884 1.0583923280090795 1.146623724281542 1.0687087017630363 0.9234883243569897 1.0799614030602405 1.133264941403716 1.0250778898363249 0.9857992194579852 1.0906845919028936 1.156403207332241 1.0 12.486059201544716 LDHQHS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LDHQHSPR 8 0 Q6ZV73-2;Q6ZV73;H0YI21 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 LDHQHS(1)PR;LDHQHS(1)PR 78.488 0.0013130999999999998 61928000.0 3035.8 3536.5 2874.2 2525.9 4929.0 3899.8 3595.6000000000004 3402.4 5440.1 5687.7 5910.1 True False 3548.1688218159793 3716.4927443871934 3281.804779021497 3144.745613391959 4203.950629406815 4312.474247522267 4248.873977799738 3884.700619412995 4207.926036054584 4402.844619720796 4442.459059537994 0.7986947711308747 0.8365845795264797 0.7387360772578053 0.7078839830026493 0.9463116199981405 0.9707403466697913 0.956423890655193 0.8744482655552025 0.9472064862410232 0.9910827676099466 1.0 12.117142765502722 -6.82133695220141 7.49998888714626 0.9637317905960646 0.7731854268397754 0.806225597151548 0.04344127745912329 0.07664915713672131 8.142905053605942 0.006902555233756066 0.01313660416653945 1.5089089960772219e-07 6.82133695220141 -0.1905463637562892 LDHQHS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LDHQHSPR 8 0 Q6ZV73-2;Q6ZV73;H0YI21 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 LDHQHS(1)PR;LDHQHS(1)PR 93.84299999999999 0.00078387 119579000.0 4892.200000000001 6562.299999999999 6083.1 5884.799999999999 7444.9 6416.4 6580.1 4972.9 6745.4 6436.8 7459.2 True False 5388.8525425527105 7115.328051393848 6495.9357466519195 6248.290730649507 6921.995907510701 6364.1469657506395 6830.509306268883 4873.711608335421 6461.914295760366 6030.379349488843 6541.7656877646605 0.8237611678192186 1.0876769959373422 0.9929942551751038 0.955138265244802 1.0581234849877306 0.9728485044418163 1.044138483749773 0.7450147010693045 0.9877936025508154 0.9218274755342759 1.0 12.675464370717778 -7.931438230910026 0.0028710527145840437 1.955143667219007 8.42652865876408e-09 0.0 0.09852051128905676 120631.72544226269 188.61816386342363 63931.22282112305 64509.71902889581 1.1710131420197288e-08 7.931438230910026 -1.9551436587924784 LDHYAIIK ddPTM_A549_PD325901_60min_R1 2 LDHYAIIK 8 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 0 ; 83.265 0.0036356 7793400.0 3743.5 3663.0 3868.7 3626.5 3826.2 3337.1 3453.0 3250.8 4021.5 3757.1 3449.0 False True 4123.5373641809565 3971.6938652996187 4131.253246382972 3850.500668620926 3557.4609116734196 3309.9237640119795 3584.405804554101 3185.960243796734 3852.490340142959 3519.876064809304 3024.794865012377 1.363245293714846 1.313045691540926 1.3657961715582545 1.2729791078262658 1.1760998912099325 1.0942638796097122 1.1850078978957252 1.0532814243532833 1.2736368950848491 1.1636743058259922 1.0 11.562621589937129 -2.0000026113631226 0.02493511834942771 1.1690082079181159e-07 2.9115346796799844 0.508092975644868 0.08248575356743917 937.3560620859664 1.7481227235760957 69.64115275442101 148.43418185760945 0.009999939871322788 2.0000026113631226 2.911534562779164 LDIDS(ph)PPITAR ddPTM_A549_MK2206_60min_R1 4 LDIDSPPITAR 11 0 P14618;P14618-2;H3BTN5;B4DNK4;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13;H3BN34;H3BQZ3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 1 LDIDS(1)PPITAR;LDIDS(0.997)PPIT(0.003)AR;LDIDS(1)PPITAR;LDIDS(1)PPITAR 171.26 4.215600000000001e-15 275105000.0 24488.86 27743.88 24435.1 24685.03 32136.4 26931.05 24842.54 27701.83 38815.6 37898.8 36770.0 True False 28621.980872856082 29155.92498830733 27900.364607845022 30732.863458153104 27409.17813083166 29780.87583561584 29356.107950953687 31628.649235796343 30023.92857577621 29337.43475814029 27638.994199626406 1.035565211459213 1.0548837189126596 1.0094565817529695 1.1119385617356696 0.991685078439003 1.0774949196964043 1.062126491974534 1.1443487779386656 1.0862887541755062 1.0614508815424566 1.0 14.754417495651404 -5.252338634337621 19.364437175337898 1.051657036090759 1.0355650195279376 0.0 0.04508020921606648 320.3851136919177 681295.6624350429 0.006716492618572646 0.09361515422391399 5.593213093680902e-06 5.252338634337621 -0.016092016562821332 LDIDS(ph)PPITAR ddPTM_A549_PD325901_60min_R1 2 LDIDSPPITAR 11 0 P14618;P14618-2;H3BTN5;B4DNK4;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13;H3BN34;H3BQZ3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 1 LDIDS(1)PPITAR;LDIDS(1)PPITAR 169.14 5.1450000000000006e-15 723460000.0 24476.0 24160.0 25137.0 24696.0 27752.0 26251.0 25500.0 25515.0 26427.0 27045.0 28367.0 True False 26960.78550172112 26196.04798952739 26842.94798106053 26221.41583131461 25802.795259202514 26037.220559491318 26470.416454135408 25006.08330886972 25316.36509236801 25337.374084471423 24878.038833228788 1.0837182819133828 1.05297882060294 1.078981673796862 1.0539985087687667 1.0371715966910768 1.046594578215476 1.0640073613350798 1.0051468878435028 1.017619003735687 1.018463483167697 1.0 14.602585140054401 -7.665109137121595 0.3385183254645007 0.9987555304699492 1.082304268432008 0.7031856350934065 0.014848407913828222 0.5463743740612185 0.13539036526515782 0.00688468639391424 0.016540509001494574 2.1621751062313312e-08 7.665109137121595 0.08354873796205886 LDIDSPPITAR ddPTM_A549_MK2206_60min_R1 2 LDIDSPPITAR 11 0 P14618;P14618-2;H3BTN5;B4DNK4;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13;H3BN34;H3BQZ3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 215.93 9.8687e-31 35246000.0 7033.3 7278.8 7712.3 6216.700000000001 9722.6 7575.200000000001 7001.4 6482.2 9199.3 10024.5 9303.599999999999 False True 8220.349092324379 7649.259829731512 8806.020108985971 7739.79177907827 8292.418419450341 8376.802635989205 8273.463752410464 7401.071700904929 7115.67323826344 7759.958487682382 6993.259353702589 1.17546750042555 1.0938046828881876 1.2592154335479657 1.1067502844693482 1.185773042302501 1.1978395498165098 1.1830626227282803 1.0583150612005292 1.0175045537952256 1.1096340197327106 1.0 12.771749294978326 -8.42075822174233 2.9203688304928055 1.0085108695601839 1.171359088785343 0.5514962280211602 0.05190906753445658 0.08678355728057521 1.4342986505516933 0.006624677312778103 0.008021550683530557 3.795262141118235e-09 8.42075822174233 0.16284821922515902 LDIDSPPITAR ddPTM_A549_PD325901_60min_R1 2 LDIDSPPITAR 11 0 P14618;P14618-2;H3BTN5;B4DNK4;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13;H3BN34;H3BQZ3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 129.28 2.89e-07 72277000.0 6398.9 5914.5 6513.7 6717.1 7392.9 7073.9 6018.5 6939.6 7483.200000000001 7167.299999999999 8024.4 False True 7048.511617378791 6412.935671939553 6955.758852060069 7132.0000113590595 6873.648208120438 7016.29250374407 6247.537310949572 6801.184233989114 7168.707127528987 6714.755454820926 7037.4496708626575 1.0015718686503625 0.9112584774128053 0.9883919853607174 1.0134353132055596 0.976724314857922 0.9969936314846861 0.8877558779306685 0.966427406528851 1.01865128175762 0.9541461422626167 1.0 12.780836984290977 -8.75330375248365 24.60999957806374 1.0088075497548674 0.9667412013866059 0.011259283953749866 0.039722444603078236 166.00569819102887 502161.1590624302 0.006073883263208659 0.006829089596136381 1.7648030575391506e-09 8.75330375248365 -0.04206634836826151 LDIPT(ph)GTTPQRK ddPTM_A549_PD325901_60min_R1 2 LDIPTGTTPQRK 12 1 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.548)GT(0.408)T(0.044)PQRK;LDIPT(0.453)GT(0.32)T(0.228)PQRK 96.604 0.00078779 12476600.0 5647.4 4952.299999999999 6077.8 6301.8 7047.900000000001 5038.799999999999 5907.799999999999 6119.2 5984.2 6534.8 6994.4 True False 6220.719890603849 5369.647701098361 6490.276056780426 6691.047873573788 6552.879817935047 4997.765683408817 6132.624561872206 5997.147755580465 5732.704884616065 6122.191612764053 6134.1331411547035 1.0141155640832482 0.8753718867092549 1.0580592086005296 1.0907894758075385 1.068265012699336 0.8147468547557521 0.9997540680569229 0.9776683383907686 0.9345582746084522 0.9980532655363261 1.0 12.582643765254474 LDIPTGT(ph)TPQR ddPTM_A549_MK2206_60min_R1 1 LDIPTGTTPQR 11 0 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.134)GT(0.564)T(0.302)PQR 55.721000000000004 0.017490000000000002 9352700.0 1637.2 1564.6 1481.7 1448.6 2739.6 1988.2 2073.7 2125.8 2802.0 2201.8 2784.5 True False 1913.5193343030248 1644.2314570530743 1691.8273401559225 1803.5070650301257 2336.6084691261763 2198.5900043396514 2450.464447592421 2427.138659989463 2167.351473874549 1704.411850783488 2093.031801709537 0.9142332824279638 0.785574044173675 0.8083142065849547 0.861672079495909 1.1163750437129967 1.0504331575582833 1.1707726779836511 1.1596281805212114 1.0355081428310404 0.8143267815574357 1.0 11.031378516857757 -6.6797308526806125 6.2042345044835105 1.048155747136935 0.8326260211421268 0.5243800871156283 0.09492309514150861 0.09871014916163477 5.9534382634164125 0.010473240438051794 0.021911869988890182 2.0905913412692471e-07 6.6797308526806125 -0.21552972599480813 LDIPTGT(ph)TPQRK ddPTM_A549_MK2206_60min_R1 1 LDIPTGTTPQRK 12 1 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.017)GT(0.864)T(0.119)PQRK 76.58800000000001 0.00070648 77377000.0 2090.6 2132.0 2276.0 1836.5 2453.9 2207.0 2135.1 2040.1 3069.1 2595.2 2172.8 True False 2443.4421697372973 2240.5096934917274 2598.771023955508 2286.442582443618 2092.934560661673 2440.5432751119665 2523.020032817949 2329.2904225442194 2373.9537503456036 2008.9425175553229 1633.2337937706884 1.4960761766360835 1.3718242311892197 1.5911812710877475 1.3999481220412724 1.2814666024205033 1.4943012350224656 1.5448002866711374 1.4261830923584597 1.4535296535009823 1.2300397684750486 1.0 10.673515608918114 -10.621285997856956 0.6858633950665999 0.9653400358850314 1.4544035599709024 0.5784565538136639 0.10392078847356673 0.28211069164849245 0.2114956540837541 0.0792498189689746 0.016534611735832885 2.3917401944826148e-11 10.621285997856956 0.48906352408587106 LDIPTGT(ph)TPQRK ddPTM_A549_PD325901_60min_R1 1 LDIPTGTTPQRK 12 1 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.005)GT(0.498)T(0.498)PQRK 77.91199999999999 0.0006374 16736000.0 1358.8 1431.2 1484.4 1255.7 1617.6 1332.5 1366.0 1356.2 1502.6 1625.4 1837.6 True False 1496.744375704309 1551.8122467968374 1585.1403104223343 1333.2617370983871 1503.985356417052 1321.6485617889668 1417.983877503881 1329.149527081681 1439.450947432254 1522.7719666075004 1611.586849506159 0.9287395067556915 0.9629094747654223 0.9835897524902684 0.8272974785733331 0.9332325818356736 0.820091428640015 0.879868111320464 0.8247458258231471 0.8931885662093526 0.944889794226185 1.0 10.654266222966836 -10.501912648157091 0.9510068644833586 0.9964793414526533 0.895024478351921 0.21001628846310083 0.054785526651423694 0.4798540074849598 0.8144261473132438 0.03044619834051461 0.00998660813809408 3.1483815002958705e-11 10.501912648157091 -0.10145486310073226 LDIPTGTT(ph)PQR ddPTM_A549_PD325901_60min_R1 1 LDIPTGTTPQR 11 0 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.004)GT(0.195)T(0.802)PQR 128.85 1.1482e-07 13353000.0 2488.7 2496.5 2340.9 2198.8 2706.7 2387.5 1991.6 2260.3 2422.2 2807.7 2774.4 True False 2741.3509919158923 2706.8888164675127 2499.767550975238 2334.614882162884 2516.5907296080823 2368.0569915731016 2067.3914278453362 2215.216543328952 2320.4033574273976 2630.4213428349217 2433.16638837064 1.1266598967576675 1.1124963871789177 1.0273722187364247 0.9594966021728787 1.0342863281509107 0.9732408777678625 0.8496712093864475 0.9104254250414673 0.9536558488222608 1.0810692418763734 1.0 11.248619264810747 -5.865340353492763 1.4670018848894795 0.9649277890701066 1.1415999206414815 0.49812826479399475 0.05741363328314097 0.27427423939978607 0.9901858115710596 0.007421475645219514 0.050748044739144446 1.3635141414389266e-06 5.865340353492763 0.17667213157137496 LDIPTGTT(ph)PQRK ddPTM_A549_MK2206_60min_R1 3 LDIPTGTTPQRK 12 1 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.016)GT(0.176)T(0.808)PQRK;LDIPT(0.004)GT(0.028)T(0.969)PQRK;LDIPT(0.177)GT(0.115)T(0.708)PQRK 90.79299999999999 0.00070648 96139900.0 7440.099999999999 8592.8 7835.9 6702.5 10033.6 7947.200000000001 8031.7 8702.2 10648.4 10821.5 10478.6 True False 8695.806987019265 9030.136817183724 8947.148447545242 8344.612800886664 8557.670731429553 8788.167429075587 9490.955925991251 9935.763499369792 8236.554402000633 8376.915634141847 7876.47442535233 1.1040227540166594 1.146469388400228 1.1359331554161707 1.0594350149893863 1.0864849257790552 1.115748868654833 1.204975146677595 1.2614480747108305 1.045715882157796 1.0635361942112993 1.0 12.943334296674703 -8.973344876841775 20.828731528041125 1.0201681328045846 1.1374927539085007 0.41315030419544385 0.05442024706411174 17.84185482500787 13942.422059260389 0.010071698555782058 0.010501073982976873 1.0632983088877107e-09 8.973344876841775 0.11732462110391606 LDIPTGTT(ph)PQRK ddPTM_A549_PD325901_60min_R1 3 LDIPTGTTPQRK 12 1 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.009)GT(0.06)T(0.931)PQRK;LDIPTGT(0.005)T(0.995)PQRK;LDIPTGT(0.005)T(0.994)PQRK 127.79 5.6486e-08 211298000.0 9844.3 10153.2 11007.0 10372.1 12446.8 8959.4 10048.199999999999 10805.3 10432.6 10749.0 11442.6 True False 10843.686089009372 11008.845796658501 11754.001210467964 11012.76106025179 11572.579707128923 8886.437616879608 10430.58974958602 10589.779814906138 9994.154102343766 10070.30630556418 10035.232740617754 1.0805614946148077 1.097019479388857 1.1712734038437862 1.0974096311366528 1.1531949488613986 0.8855238185868495 1.0393968948391255 1.0552600112644968 0.9959065584889006 1.0034950425020503 1.0 13.292786456124551 -7.233462942208019 24.99344526667554 0.9991982651077478 1.1202266405052634 0.6327798777819009 0.04674483552750234 352.2195231497263 314664.3555586869 0.006436795456282317 0.011147325792928523 5.8416705119262386e-08 7.233462942208019 0.12102837539751565 LDKAS(ph)PDSR ddPTM_A549_PD325901_60min_R1 2 LDKASPDSR 9 1 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 LDKAS(0.998)PDS(0.002)R;LDKAS(0.997)PDS(0.003)R 73.273 0.0018872 12731100.0 3882.0 3867.2 3746.6 4158.1 4146.3 3883.2 3335.8 4340.299999999999 5032.5 4927.3 5329.4 True False 4276.097782222644 4193.1025159395795 4000.866806136029 4414.936393269732 3855.078191958467 3851.5765066708573 3462.7456944198016 4253.729311600518 4821.0015259901675 4616.189437101724 4673.917585850089 0.914885147989812 0.8971280385075383 0.8559985777773088 0.9445901242751045 0.8248066255231814 0.824057428468828 0.7408658006514677 0.9100993403217768 1.031469091493047 0.9876488732015446 1.0 12.190416580286115 -8.627785884924693 4.577608841949742 1.0145886620504765 0.8576894363288062 0.6071872370746325 0.0520537556904803 0.09768808623828212 3.552009169024153 0.009132626037771535 0.010359908755539141 2.3562106522734876e-09 8.627785884924693 -0.15689922572167025 LDKASPDS(ph)R ddPTM_A549_MK2206_60min_R1 1 LDKASPDSR 9 1 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 LDKAS(0.122)PDS(0.878)R 45.997 0.0115 5496100.0 2376.9 2261.1 2091.8 1995.4 2568.1 1820.9 2128.1 2250.9 2714.1 2677.2 3547.1 True False 2778.062610374334 2376.180332061042 2388.448694160868 2484.2730895769096 2190.335891941499 2013.586429384404 2514.7482234274175 2569.9719680921467 2099.3606835270934 2072.4186606038497 2666.2571750202537 1.0419334775360636 0.8912044773186562 0.8958058196853139 0.9317454868388824 0.8215021088222146 0.7552108807242528 0.9431754172056995 0.9638875019896099 0.7873811660764293 0.7772763557919378 1.0 11.380600227591632 -5.261214860455511 21.98755796155688 0.8920591100913395 1.0419336125560739 0.24598110142852503 0.07911527182085322 4.377711636943598 426987.7882034545 0.012010961184743126 0.09645631876697244 5.480057804883335e-06 5.261214860455511 0.14987450246473433 LDKASPDS(ph)R ddPTM_A549_PD325901_60min_R1 1 LDKASPDSR 9 1 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 LDKAS(0.45)PDS(0.55)R 55.567 0.0077301 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LDKS(ph)QIHDIVLVGGSTR ddPTM_A549_PD325901_60min_R1 1 LDKSQIHDIVLVGGSTR 17 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 1 LDKS(0.996)QIHDIVLVGGS(0.002)T(0.002)R 43.888000000000005 0.016263 3320800.0 2833.1 2976.0 2772.1 2855.2 3212.6 2953.2 2812.9 3453.1 2702.4 2714.5 3115.7 True False 3120.71422638201 3226.7979642729074 2960.2313759914828 3031.55921937032 2986.9580588683366 2929.150118330338 2919.9464487779424 3384.2252115954534 2588.8275258491462 2543.1060067405306 2732.4886520495975 1.142077652926833 1.1809007740443995 1.083346265233731 1.1094498844840195 1.0931273425885468 1.0719715582837748 1.068603321220652 1.2385139126038085 0.9474248040910643 0.9306922481939627 1.0 11.415999789098786 -8.787643844913635 24.99078715459459 0.9751728013886032 1.1190457404027998 0.667741876464413 0.051161757199984434 98.6322856881057 94063.57960745036 0.008652585571940397 0.009212718136500502 1.6306327295045632e-09 8.787643844913635 0.14387293901419662 LDLAGR ddPTM_A549_MK2206_60min_R1 4 LDLAGR 6 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;P63267-2;Q6S8J3;A5A3E0;P0CG38;Q562R1;A0A2R8YEA7;P0CG39;Q9BYX7;P68133;P68032;P63267;P62736 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;ACTBL2;POTEJ;POTEKP;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Beta-actin-like protein 2;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;; 126.68 0.038239999999999996 278113000.0 13510.9 14334.100000000002 13898.9 12434.4 16278.8 12259.0 11907.9 13805.0 16985.7 18214.9 17531.6 False True 15791.209610209346 15063.6444641087 15869.973016192977 15480.828558201432 13884.210084395963 13556.23924313439 14071.411291645752 15761.901026039392 13138.466070589198 14100.141439202534 13178.019872454992 1.1982991195222361 1.1430886134566458 1.2042759966817753 1.1747461840272244 1.053588491956752 1.0287007740419303 1.0677940561508903 1.1960750688337698 0.9969985018805086 1.0699742127931513 1.0 13.685845987011957 -6.87588295492121 0.29779545042380634 0.9837140414825593 1.252832803453253 0.3843067126395513 0.061189700415094236 1.6752433706127747 0.22448892168284867 0.031845724679901925 0.15264472546076263 1.3308130320861068e-07 6.87588295492121 0.26911876197069373 LDLAGR ddPTM_A549_PD325901_60min_R1 2 LDLAGR 6 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;P63267-2;Q6S8J3;A5A3E0;P0CG38;Q562R1;A0A2R8YEA7;P0CG39;Q9BYX7;P68133;P68032;P63267;P62736 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;POTEI;ACTBL2;POTEJ;POTEKP;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Beta-actin-like protein 2;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 137.5 0.026292000000000003 492870000.0 7918.3 8291.9 9168.9 9232.6 9263.6 9042.5 8920.3 9123.2 8869.8 8874.699999999999 8950.4 False True 8722.15998685563 8990.687513425577 9791.156691074742 9802.876733244058 8612.956693685082 8968.860878031317 9259.766897875454 8941.230618988055 8497.033151560372 8314.349927434218 7849.557541260306 1.1111658129784499 1.1453750693802869 1.2473514130712007 1.2488444962300553 1.0972537813006729 1.142594449545407 1.179654630111639 1.1390744729227722 1.0824856186984662 1.0592125586354115 1.0 12.938395620065105 -9.185416342160813 0.5565689299875666 1.0055867605928153 1.178773499588202 0.5421376386348464 0.0484457370003 0.327614657324457 0.2332467213162664 0.020618057297431124 0.014577930901736775 6.525047204163008e-10 9.185416342160813 0.17318673899538672 LDLAGTLPGS(ph)KR ddPTM_A549_MK2206_60min_R1 2 LDLAGTLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLAGTLPGS(1)KR;LDLAGT(0.001)LPGS(0.999)KR 105.46 6.7876e-05 35497000.0 3326.2 4242.5 4019.5 3739.6000000000004 5521.2 3790.2000000000003 3890.6 4049.2 6179.3 5416.2 5706.3 True False 3887.5812422176414 4458.42512881738 4589.525540768527 4655.802167877024 4709.038793889414 4191.276448268859 4597.471659257884 4623.1865001549195 4779.698416314422 4192.676658285731 4289.268224131851 0.90635069645347 1.0394372410039165 1.0700019912365002 1.085453724176776 1.0978653112425778 0.9771541972330664 1.0718545493126428 1.0778497073567028 1.114338895717307 0.9774806421984323 1.0 12.066515820622827 -5.264955532173567 3.570710375962674 1.058442503037402 0.889218451724687 0.4541680451889435 0.04541421448629766 0.19329800195225114 4.369712705416425 0.006522364360218407 0.08688692328317889 5.433059582600683e-06 5.264955532173567 -0.169224051312715 LDLAGTLPGS(ph)KR ddPTM_A549_PD325901_60min_R1 2 LDLAGTLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLAGTLPGS(1)KR;LDLAGTLPGS(1)KR 105.14 7.0047e-05 67067000.0 7059.0 6454.5 6481.9 7011.799999999999 7335.9 7617.5 7509.1 7759.3 7784.9 7207.2 7967.9 True False 7775.62448343886 6998.443367069721 6921.8007128311365 7444.902961046794 6820.65169148111 7555.46560557408 7794.862909637184 7604.534674446908 7457.727725718992 6752.136162011551 6987.898812679655 1.1127271146699869 1.0015089735373575 0.9905410622534226 1.0653993654770584 0.9760661787352913 1.081221381148875 1.1154802206771055 1.0882433873610702 1.0672346474432093 0.9662612958504339 1.0 12.770643002318277 -5.240625469265821 23.158338845513388 1.038789953651324 1.1127273156428943 0.16993423281078646 0.04867498317018147 2640.6035959574865 2937908.69071661 0.00648150228388142 0.35297019065381596 5.746117874140314e-06 5.240625469265821 0.0739373619915702 LDLDTDSADGLSAPLLAS(ph)PEPSAGPLQVAAPAHSHAGGPGPTEHA ddPTM_A549_PD325901_60min_R1 1 LDLDTDSADGLSAPLLASPEPSAGPLQVAAPAHSHAGGPGPTEHA 45 0 Q15528 Q15528 MED22 Mediator of RNA polymerase II transcription subunit 22 1 LDLDTDSADGLS(0.068)APLLAS(0.875)PEPS(0.058)AGPLQVAAPAHSHAGGPGPTEHA 90.036 2.68e-10 3340200.0 872.91 628.44 1056.9 713.34 985.59 1117.5 590.78 669.03 699.62 736.9 920.56 True False 961.5271805976212 681.4008443103716 1128.6275896559998 757.401391687316 916.3655585009163 1108.399450505944 613.2624561872201 655.6856718061184 670.2174043940865 690.3720082398593 807.3369559106387 1.1909862091139665 0.8440104708718343 1.3979634914432477 0.9381478032713148 1.1350472089653054 1.3729081053346812 0.7596115248997718 0.8121586247300364 0.8301582127354895 0.8551225150608294 1.0 9.657027122461102 -7.777291169335056 24.999797904026153 0.8970526667249137 1.1341981806182202 0.4336789425402001 0.16386060494123145 209.3837458305925 330217.6164795335 0.025106425287565848 0.034750897733200954 1.6699706201798522e-08 7.777291169335056 0.23714551389330651 LDLEDS(ph)YTLR ddPTM_A549_MK2206_60min_R1 2 LDLEDSYTLR 10 0 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 LDLEDS(1)YTLR;LDLEDS(1)YTLR 158.05 1.2649e-08 3650500.0 1121.73 1380.79 1185.13 1240.99 1894.52 1012.38 1569.62 1317.3200000000002 1962.92 1775.6999999999998 1981.9099999999999 True False 1311.050600334554 1451.0663131690628 1353.1992546662527 1545.0326057101586 1615.8386176554684 1119.5093796365438 1854.7996365096287 1504.0541441233036 1518.3217541391266 1374.5681367227905 1489.7470490666728 0.880049133949235 0.9740353666605055 0.9083416245154052 1.0371107005569316 1.0846395827182822 0.7514761518325658 1.2450433364990798 1.0096037075996185 1.0191809106722889 0.9226855912109093 1.0 10.540851674385095 -7.7516413593134175 24.999834127125002 1.025427310049648 0.9505039309970409 0.16214160067408034 0.10959575249356004 351.87348097714664 897809.3152266988 0.0151747058145234 0.02234983863765644 1.7715713192581536e-08 7.7516413593134175 -0.07492337905260715 LDLEDS(ph)YTLR ddPTM_A549_PD325901_60min_R1 2 LDLEDSYTLR 10 0 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 LDLEDS(1)YTLR;LDLEDS(0.94)YT(0.06)LR 143.79 4.4818e-08 7459200.0 1782.6 2065.57 1585.84 1663.79 2095.28 2173.78 1910.57 1974.21 1928.01 2204.0 2220.8 True False 1963.5682397192377 2239.642833018545 1693.464638830609 1766.5585295587512 1948.1147611235904 2156.077456394462 1983.277786854019 1934.832832812215 1846.9824445353788 2064.8390638630076 1947.655678811101 1.0081701098819735 1.1499172350554694 0.8694887177718924 0.9070178824611872 1.0002357102014918 1.1070116139371138 1.0182897359273804 0.9934162664692798 0.9483105584981141 1.0601663765966263 1.0 10.927522934167174 -9.392387922031421 0.0037805149749823666 7.610255861722207e-08 1.9739799997773182 0.0 0.07971956522873189 48795.180881660446 93.18339333782608 24490.738256088247 24161.416561762755 4.051464874193987e-10 9.392387922031421 1.9739799236747595 LDLIS(ph)KGEEPR ddPTM_A549_MK2206_60min_R1 2 LDLISKGEEPR 11 1 Q99808;Q99808-2 Q99808 SLC29A1 Equilibrative nucleoside transporter 1 1 LDLIS(1)KGEEPR;LDLIS(1)KGEEPR 75.462 0.00036733 25872000.0 2772.6 2438.7 2395.3999999999996 2796.9 3368.2 3716.8 2834.5 2315.9 3613.7 4294.9 3859.2 True False 3240.5470964381657 2562.819413470109 2735.1037393598535 3482.1406255576107 2872.74224182756 4110.1093089878395 3349.4919596377104 2644.185917146295 2795.202719893099 3324.6791070624063 2900.854131498455 1.1171010156116468 0.8834706253038197 0.9428615212537481 1.2003845997450717 0.9903090991837037 1.4168617664566043 1.1546571484818193 0.9115197791005175 0.9635792057042245 1.1461035117077816 1.0 11.502262036573468 -8.258875489776084 24.951967499876613 0.9769746262019429 1.098108651129121 0.07952191592232605 0.14491777870391034 334.8586063219094 3258875.891918379 0.022465433274477815 0.028322181001645158 5.509656330690427e-09 8.258875489776084 0.12113402492717806 LDLIS(ph)KGEEPR ddPTM_A549_PD325901_60min_R1 2 LDLISKGEEPR 11 1 Q99808;Q99808-2 Q99808 SLC29A1 Equilibrative nucleoside transporter 1 1 LDLIS(1)KGEEPR;LDLIS(1)KGEEPR 54.09 0.0054621 35743000.0 2876.5 3196.1000000000004 2763.9 3285.2 3259.6000000000004 2412.2 3217.2 2453.8999999999996 2960.8 2889.9 3045.3 True False 3168.5201624326205 3465.446563713924 2951.474874680877 3488.119342769465 3030.6569410095326 2392.555842962361 3339.632306519391 2404.95503945269 2836.367872459351 2707.4312208065794 2670.7474057472286 1.1863795713567766 1.2975568398031834 1.1051119504336298 1.306046140965379 1.134759855794602 0.8958375613559627 1.250448582045901 0.900480155583948 1.0620127782791142 1.013735411660575 1.0 11.383027819711037 -7.003846654036113 23.87568693214178 1.0287610974583223 1.2205474330492339 0.4685738173270113 0.1014270560895341 58.031473313794955 360202.48718676216 0.012998798742795529 0.024159020722918124 9.911818616279623e-08 7.003846654036113 0.19178633559091152 LDLKS(ph)PK ddPTM_A549_MK2206_60min_R1 1 LDLKSPK 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 LDLKS(1)PK 73.067 0.0053785 79368000.0 19656.0 16095.0 16119.0 12342.0 18753.0 13888.0 11829.0 12755.0 16727.0 15196.0 14474.0 True False 22973.452256938835 16914.16675269668 18404.916579586494 15365.79055405343 15994.458541948878 15357.618941891698 13978.176182943896 14563.06031054925 12938.3612075302 11763.213045919652 10879.706337922018 2.1115875321802737 1.5546528764054142 1.6916740220675628 1.412335046259 1.4701185900761875 1.4115839586921188 1.2847935182057197 1.3385527015364955 1.1892197092151826 1.0812068525156884 1.0 13.4093519958306 -2.000000000000034 0.17002371944428885 0.9503783052894316 4.96540683232185 0.872260608882775 0.10457512837870063 11.315501762069223 0.11486294074905716 0.11618692579986493 11.676500302220118 0.009999999999999213 2.000000000000034 4.015028527032419 up LDLLEDR ddPTM_A549_MK2206_60min_R1 2 LDLLEDR 7 0 Q14697;Q14697-2;F5H6X6;E9PKU7;E9PNH1 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 91.041 0.034494 2596200.0 714.04 733.9200000000001 763.74 410.11 812.14 626.13 471.93 626.29 1107.1200000000001 947.93 1016.0899999999999 False True 834.5524953980774 771.2733931742249 872.0498162723114 510.58696841053757 692.6752818353523 692.3866610085436 557.6735722391342 715.068525432684 856.3590877073492 733.7919546340232 763.7668103426267 1.0926797081215092 1.0098283700338206 1.1417749559988195 0.6685115947647524 0.9069198510008798 0.9065419597087991 0.7301620922608055 0.9362393282210095 1.1212310827216823 0.9607539168988546 1.0 9.576988418461966 -8.663665199844623 7.120701568740129 1.0570655957599098 0.9171329874790954 0.09133912965009183 0.1360564326134479 0.2899879681595877 18.45558176525899 0.023277549509604128 0.02637633731969009 2.1693758448827606e-09 8.663665199844623 -0.13993260828081433 LDLLEDR ddPTM_A549_PD325901_60min_R1 2 LDLLEDR 7 0 Q14697;Q14697-2;F5H6X6;E9PKU7;E9PNH1 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 100.45 0.031091000000000004 3982200.0 1313.8200000000002 1233.63 1269.99 1190.0900000000001 1340.67 1116.03 1264.49 1210.35 1200.1399999999999 1302.93 1396.08 False True 1447.198039216836 1337.5923295248622 1356.1791584702648 1263.5991564095082 1246.505964260416 1106.9414216985674 1312.610858905478 1186.208619748793 1149.702289399272 1220.6627774405752 1224.3710104802776 1.1819930616040566 1.0924730478551365 1.1076537641464441 1.0320394272597508 1.0180786326943951 0.9040898651009005 1.072069534209722 0.9688310239258973 0.9390146283750089 0.9969713158773272 1.0 10.257825076250654 -6.031059172017643 0.8031090559888137 0.9729817272993851 1.1870517212784968 0.6834765855833691 0.04317768125781787 0.45226411243893494 0.3811935369644121 0.006958915469069943 0.06795956533745223 9.309810219600012e-07 6.031059172017643 0.21406999397911164 LDLLGNLPGS(ph)KR ddPTM_A549_MK2206_60min_R1 3 LDLLGNLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLLGNLPGS(1)KR;LDLLGNLPGS(1)KR;LDLLGNLPGS(1)KR 86.37799999999999 0.00013247 69676900.0 4299.4 5201.9 5332.6 4898.5 7171.599999999999 5299.1 5159.7 5478.4 6941.0 6891.1 6881.0 True False 5025.03360976205 5466.6544908886535 6088.842865705246 6098.632719902022 6116.667140161074 5859.8472447421045 6097.150701761403 6254.979976896356 5368.874582499375 5334.395723923198 5172.257794061169 0.9715357992271455 1.0569184113687282 1.1772117918593517 1.1791045540894198 1.182591313832865 1.1329379698495368 1.1788180219404771 1.2093326021139892 1.0380137255849782 1.0313476118781622 1.0 12.33657846795893 -8.903260771990704 6.607734744477829 1.0165861557152513 1.1389516449909576 0.37431858548081454 0.0652720154337315 0.1590003157111831 9.245856520397123 0.011945782603460799 0.012656624972265567 1.2495085378990147e-09 8.903260771990704 0.12236548927570623 LDLLGNLPGS(ph)KR ddPTM_A549_PD325901_60min_R1 4 LDLLGNLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLLGNLPGS(1)KR;LDLLGNLPGS(1)KR;LDLLGNLPGS(1)KR;LDLLGNLPGS(1)KR 104.17 0.00011674 137397900.0 11179.0 10953.9 11624.6 9900.1 14160.300000000001 12193.0 12536.099999999999 13089.5 12144.3 11962.4 12153.0 True False 12313.883850455159 11877.023595715387 12413.515260398466 10511.606692241567 13165.729378383012 12093.704250576262 13013.168145517135 12828.419653985899 11633.917303940849 11207.09202248405 10658.258044214379 1.155337373084104 1.1143494130509057 1.1646851867258827 0.986240589093973 1.2352608957079776 1.1346792506249261 1.2209469963603548 1.2036131608719634 1.0915402175176352 1.0514937784385503 1.0 13.379684046883867 -9.571797575984775 1.0986680160887103 1.0186392791344212 1.1480410882717638 0.3349056956591955 0.06580635748172174 0.3027525531655764 0.757708956507903 0.017915309426851198 0.01282751211191943 2.6804173722768245e-10 9.571797575984775 0.12940180913734256 LDLLGNLPGSKR ddPTM_A549_MK2206_60min_R1 1 LDLLGNLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 0 65.179 0.0060957 974650.0 476.25 599.24 637.95 405.6 690.28 791.7 542.23 583.44 705.22 700.93 865.18 False True 556.6293568054094 629.7387564390157 728.4209027822567 504.9720182080758 588.7407264083865 875.4771685120722 640.746172261195 666.1444067100633 545.4887960049288 542.5894261829728 650.3319282467432 0.8559157756655891 0.9683343675540496 1.1200755662512785 0.7764835098431208 0.9052926680004733 1.346200502368548 0.985260210103184 1.024314473542687 0.8387851992374641 0.8343269069469834 1.0 9.345032444849974 -4.382089776304033 13.436722164952897 0.9583783250566581 0.9709020266847294 0.0 0.1536073482967627 3388256.828194417 0.11062358070317234 0.019959762012269018 14847645.665204434 4.148682732044493e-05 4.382089776304033 0.01252370162807126 LDLPGNLPGS(ph)K ddPTM_A549_PD325901_60min_R1 2 LDLPGNLPGSK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLPGNLPGS(1)K;LDLPGNLPGS(1)K 68.809 0.0038988 2842500.0 3244.2 3771.4 3869.0 3775.2 4458.9 4313.799999999999 4124.9 4395.4 4791.1 4537.299999999999 4529.9 True False 3573.548795746188 4089.229113729452 4131.573606187021 4008.3855298987223 4145.722246369922 4278.669843035832 4281.875326731891 4307.730298875404 4589.746728499053 4250.814103659535 3972.7510174020176 0.8995149155063615 1.0293192540426572 1.0399779870647081 1.008969732142944 1.0435394083873444 1.0770042784694496 1.077811145973106 1.0843192236327073 1.1553069166414862 1.0699925782007242 1.0 11.955922663485701 -3.793625294075096 0.6341845616174214 1.0738737462431525 2.1366990533822036e-16 0.6003757289661007 0.03868518980221632 12.697876504009738 0.8282743589061519 0.00950408662696375 15.126596774945023 0.00016083283077995085 3.793625294075096 -1.0738737462431522 LDLPGNLPGS(ph)KR ddPTM_A549_MK2206_60min_R1 2 LDLPGNLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLPGNLPGS(1)KR;LDLPGNLPGS(1)KR 65.472 0.0024546 25951000.0 3893.2 4670.6 4364.2 4624.1 5893.3 4971.1 4271.3 4668.799999999999 6198.299999999999 5641.9 6015.7 True False 4550.276980398571 4908.313590254436 4983.109183983579 5757.004707583738 5026.403376807303 5497.138502450885 5047.339921397266 5330.616697600337 4794.394946651183 4367.390871530272 4521.835665126257 1.0062897719816892 1.0854692549109675 1.102010235005841 1.2731565527653899 1.1115847078593375 1.215687368925513 1.1162148063725215 1.1788612175165145 1.060276246575475 0.9658446690605966 1.0 12.142692846540234 -9.064178917521694 1.9748060387417927 1.0210119110809135 1.138982107323228 0.3938136540741858 0.06984919550904709 0.23742347725938698 1.890105207976454 0.01358827475637626 0.01321356199533583 8.626230972854852e-10 9.064178917521694 0.11797019624231453 LDLPGNLPGS(ph)KR ddPTM_A549_PD325901_60min_R1 2 LDLPGNLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLPGNLPGS(1)KR;LDLPGNLPGS(1)KR 92.773 0.00011135 53083000.0 9516.9 8744.2 9402.0 9181.8 10662.8 9350.599999999999 9985.2 10717.5 10166.7 10281.7 10425.2 True False 10483.048682028515 9481.10442177257 10040.076258818912 9748.938932619227 9913.88171266304 9274.451813781554 10365.192250111104 10503.731054783906 9739.42895465161 9632.511707314097 9142.966490787769 1.1465697367031784 1.036983393882664 1.0981202073676033 1.0662774431517408 1.0843178439571037 1.014381035206272 1.1336793436304093 1.1488318441686525 1.065237301751551 1.0535433676826425 1.0 13.158446617032876 -9.967771352495248 0.9501417537456612 1.0076448969330745 1.0865005971313622 0.20529208422681056 0.04331288400872026 0.37810717162424146 0.6931105711504626 0.01513411570522574 0.007943658500970835 1.0770321006115206e-10 9.967771352495248 0.07885570019828769 LDLRDDKDTIEK ddPTM_A549_PD325901_60min_R1 2 LDLRDDKDTIEK 12 2 P63000-2;B1AH77;B1AH80;P63000;P15153;B1AH78 P63000-2 RAC1;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2 0 ; 98.531 8.358299999999999e-05 12173000.0 5356.1 5449.1 5496.6 6431.2 7168.6 7453.6 6503.1 7120.3 7948.4 6450.5 7492.9 False True 5899.847329047578 5908.314780618115 5869.63232974091 6828.4406176850725 6665.102266327445 7392.900352833201 6750.579029132867 6978.280030732705 7614.356389305564 6043.214329150785 6571.320801406563 0.8978175784363991 0.8991061248072786 0.8932195683529163 1.0391275702478981 1.0142713265346608 1.1250250256007563 1.0272788733260343 1.0619295940078035 1.1587254099169446 0.9196346536387724 1.0 12.681967658577612 -6.3808252274641974 1.8496095126966645 1.0732320306677348 0.8900557387604229 0.4708924855782364 0.06413030608462693 0.18050560926372627 1.1875985634736415 0.008873509906966169 0.027354289752097395 4.1607801851616797e-07 6.3808252274641974 -0.18317629190731188 LDLTENLT(ph)GSK ddPTM_A549_MK2206_60min_R1 3 LDLTENLTGSK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.995)GS(0.005)K;LDLTENLT(0.944)GS(0.056)K;LDLTENLT(0.994)GS(0.006)K 136.99 3.5028e-08 12978300.0 6512.4 7929.0 6791.1 6710.4 9871.2 7569.3 6148.6 7491.0 11470.0 11073.0 10760.1 True False 7611.533907106657 8332.55223250277 7754.180097005385 8354.448301241302 8419.159556299574 8370.278301905308 7265.721031232466 8552.872190225356 8872.06331382623 8571.601609467512 8088.070206347564 0.9410815822460445 1.0302274856570033 0.9587181984300606 1.0329346912301383 1.0409355187955922 1.0348918948967907 0.8983256630896065 1.0574676000602732 1.096932035390022 1.059783284613488 1.0 12.981579804888904 LDLTENLT(ph)GSK ddPTM_A549_PD325901_60min_R1 2 LDLTENLTGSK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.98)GS(0.02)K;LDLTENLT(0.985)GS(0.015)K 153.52 1.7081e-12 35338000.0 18196.6 16984.300000000003 16648.6 18313.199999999997 21677.7 18392.5 18984.4 18403.4 19706.8 18230.4 19984.4 True False 20043.90543637108 18415.62656740604 17778.474112164695 19444.364771705164 20155.133136005134 18242.71757801394 19706.861730662302 18036.329749812 18878.591728243013 17079.32943278048 17526.445491549242 1.1436377927307442 1.050733679928742 1.0143799049691493 1.1094300199707172 1.1499840709699733 1.040868074864927 1.1244072130977383 1.0290922799211404 1.0771489140422532 0.9744890623153252 1.0 14.097245814797654 -10.843637534925199 0.41886043008059726 0.972980278551634 1.086029073719751 0.41285847427363465 0.04390357160785625 2.0819891244727975 0.4352850096154649 0.10321411583061615 0.012255795821175773 1.433383711805532e-11 10.843637534925199 0.11304879516811706 LDLTENLT(ph)GSKR ddPTM_A549_MK2206_60min_R1 2 LDLTENLTGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.985)GS(0.015)KR;LDLTENLT(0.998)GS(0.002)KR 136.17 1.9429e-08 60376000.0 5000.5 5414.799999999999 5291.3 4838.2 6544.4 5121.0 6041.4 5167.200000000001 7917.3 6935.9 7613.4 True False 5844.462149512756 5690.39019151923 6041.685904681807 6023.559217195053 5581.727429314256 5662.900820955314 7139.044178851746 5899.666423886327 6124.044191330111 5369.075372808246 5722.782660849489 1.0212622942149623 0.994339734487584 1.055725206203267 1.0525577457979012 0.9753519852326011 0.9895362372742483 1.2474777747006083 1.0309086983587423 1.0701165069968006 0.9381931292863849 1.0 12.482501102090884 LDLTENLT(ph)GSKR ddPTM_A549_PD325901_60min_R1 4 LDLTENLTGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.987)GS(0.013)KR;LDLTENLT(0.975)GS(0.025)KR;LDLTENLT(0.996)GS(0.004)KR;LDLTENLT(0.987)GS(0.013)KR 118.33 1.2246e-05 86355000.0 10865.0 9861.1 9727.6 10042.4 11124.699999999999 10881.6 9878.5 11179.2 11800.7 10723.900000000001 11838.0 True False 11968.00680160975 10692.129504533465 10387.77343281077 10662.696240054813 10343.339450131536 10792.983857382987 10254.431723222619 10956.222086087262 11304.757617039668 10046.791123847775 10382.001047264863 1.1527649387747578 1.029871742052107 1.0005559993222528 1.0270367139737382 0.9962760938900587 1.0395860882932966 0.9877124531714575 1.0553092834616578 1.08888041578631 0.9677123974568084 1.0 13.34179691792099 -12.763580352716273 0.002749914440535225 0.05406744705377593 1.9983742953715145 0.0701279063360285 0.04850266014079516 349987.2032674517 115.09925873958939 41767.962898084894 39636.232973280654 1.7235331751980316e-13 12.763580352716273 1.9443068483177386 LDLTENLTGS(ph)KR ddPTM_A549_MK2206_60min_R1 2 LDLTENLTGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.088)GS(0.912)KR;LDLTENLT(0.032)GS(0.968)KR 112.02 2.3768000000000004e-05 62094000.0 4120.6 4826.8 4785.1 4366.0 6054.1 4825.5 4484.9 4666.4 6677.700000000001 6506.1 6687.299999999999 True False 4816.056541002352 5072.463503070295 5463.699133009446 5435.670195997191 5163.549909817776 5336.131207092343 5299.748276514087 5327.876490250646 5165.211612095674 5036.36749131731 5026.658849909208 0.9581029237918822 1.009112345700945 1.0869444886056137 1.0813684314572831 1.0272330118267408 1.0615662145420361 1.0543282197497472 1.0599240269402566 1.027563589717048 1.0019314303393152 1.0 12.295384063958878 -9.597790180280994 1.0447504927662068 1.005273234897049 1.044017161584596 0.16160303548748522 0.03441577950765422 0.5786093518516267 1.3129062329993977 0.010211521626205769 0.0070845866627947665 2.524700230639845e-10 9.597790180280994 0.03874392668754689 LDLTENLTGS(ph)KR ddPTM_A549_PD325901_60min_R1 3 LDLTENLTGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.031)GS(0.969)KR;LDLTENLT(0.02)GS(0.98)KR;LDLTENLT(0.006)GS(0.994)KR 123.02 7.4775e-06 124950100.0 7280.0 6648.3 7095.9 6441.5 7964.3 7257.5 7461.5 7252.1 7438.9 7826.9 8146.299999999999 True False 8019.0602407472525 7208.575573210879 7577.4704451130765 6839.376825292073 7404.915043343424 7198.397326216458 7745.451465589464 7107.4511763376095 7126.26890247158 7332.7081982528925 7144.356743650426 1.1224327855512286 1.0089887490035443 1.0606231907228851 0.9573117735715807 1.0364705051892278 1.007564093522354 1.084135597298282 0.994834305083433 0.9974682337643733 1.0263636687473459 1.0 12.802588405917051 LDLTENLTGS(ph)KRR ddPTM_A549_MK2206_60min_R1 2 LDLTENLTGSKRR 13 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.108)GS(0.892)KRR;LDLTENLT(0.103)GS(0.897)KRR 103.21 2.5702e-05 10767300.0 834.53 1043.26 1087.98 661.19 1118.27 947.6800000000001 854.71 596.48 1310.69 1413.65 1445.54 True False 975.3782617004048 1096.357477876257 1242.2719238326522 823.1815796819475 953.7739643633108 1047.9628685809287 1009.9997434545596 681.0328666433886 1013.8208077418396 1094.305483177435 1086.5725231255904 0.8976651267553419 1.009005339765559 1.1432940713972624 0.7575946953950361 0.8777821489721859 0.9644665646121818 0.9295281464961358 0.6267716624053378 0.9330447679879884 1.0071168374749624 1.0 10.085568754866369 -4.962173383717104 17.36950465439528 0.9382764101019117 0.71330481355452 0.0 0.13132683060925998 66606586.02638869 780872282.0366975 0.01767911251394225 478583431.4710023 1.0910046868592976e-05 4.962173383717104 -0.22497159654739163 LDLTENLTGS(ph)KRR ddPTM_A549_PD325901_60min_R1 2 LDLTENLTGSKRR 13 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.144)GS(0.856)KRR;LDLTENLT(0.105)GS(0.895)KRR 104.41 2.325e-05 24080000.0 1250.77 1283.4699999999998 1125.07 1325.1100000000001 1443.95 1339.6599999999999 1351.49 1484.68 1587.33 1424.54 1580.46 True False 1377.7472496317926 1391.6325212383567 1201.4240157955107 1406.9590351568393 1342.531933357073 1328.750253122857 1402.9216915137051 1455.0668926910714 1520.6200401887675 1334.594301286483 1386.0734393613975 0.993992966394738 1.0040106690735813 0.8667823664156209 1.0150681740247935 0.9685864364990753 0.9586434711100511 1.012155382012132 1.0497761888875536 1.09707032615051 0.9628597326714288 1.0 10.436787983548191 -7.974737628354062 3.1626990325520876 1.0472158204743864 0.9671263164723918 0.21543301875348764 0.04902086384728572 0.20549947308103864 4.262124651787504 0.007814980933158635 0.010798346118140413 1.0598938486916305e-08 7.974737628354062 -0.08008950400199466 LDMS(ph)LVS ddPTM_A549_MK2206_60min_R1 1 LDMSLVS 7 0 Q9BU64-2;Q9BU64 Q9BU64-2 CENPO Centromere protein O 1 LDMS(0.932)LVS(0.068) 42.108999999999995 0.038502 1118000.0 770.3 628.9 572.63 440.87 952.16 502.24 573.77 716.02 1322.4 933.54 982.55 True False 900.3078079731374 660.9083237509133 653.8375445727781 548.8831697914065 812.0985253187245 555.3867034400698 678.0165820008219 817.5180277192844 1022.8785114388676 722.6526656283115 738.555717999535 1.2190113569382781 0.8948658952110765 0.8852921027323084 0.7431845105446089 1.0995765187742217 0.7519902559882686 0.9180303739808685 1.1069144924280434 1.384971352208137 0.9784673627410282 1.0 9.52856295443355 -8.355859919153291 4.222597986002218 1.1841228180028072 0.9196614956516136 0.20013187663325915 0.1654264762326245 0.21140733892063537 6.709036601094592 0.02996492444012335 0.03651083320805712 4.406969865467864e-09 8.355859919153291 -0.2644613223511936 LDNARQS(ph)AER ddPTM_A549_MK2206_60min_R1 2 LDNARQSAER 10 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LDNARQS(1)AER;LDNARQS(1)AER 102.52 0.00011053 240604000.0 6561.8 7645.9 6496.2 5475.5 7551.5 5980.0 5427.9 5016.7 8743.8 10530.1 10443.2 True False 7669.27141939262 8035.043651720631 7417.458842627316 6816.997745804534 6440.684353411562 6612.79963079726 6414.07917012437 5727.832587999405 6763.343260979405 8151.343096527937 7849.86522234263 0.9769940250138314 1.023590013857937 0.9449154389957448 0.8684222662067748 0.8204834313689622 0.8424093208601366 0.8170941778552244 0.7296727301376587 0.8615871826345861 1.0384054841256671 1.0 12.938452168637417 -5.998685761865691 4.226902517723743 0.8921995825689971 0.999061661987801 0.24892412422292143 0.08276464181208766 0.2686216936130332 11.567944698059328 0.013017821089125848 0.04074955954745742 1.003030728536077e-06 5.998685761865691 0.10686207941880388 LDNARQS(ph)AER ddPTM_A549_PD325901_60min_R1 4 LDNARQSAER 10 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LDNARQS(1)AER;LDNARQS(1)AER;LDNARQS(1)AER;LDNARQS(1)AER 120.53 1.409e-05 564065000.0 17456.7 18240.0 17779.699999999997 19396.5 20359.0 21428.7 18610.5 20124.7 19837.5 20967.8 21365.9 True False 19228.89133305668 19777.148813285577 18986.337360021556 20594.57775235236 18929.054074737112 21254.19177186284 19318.732761556366 19723.297070978264 19003.79886176452 19643.889529612876 18738.02974959929 1.0261960083326203 1.055455086664515 1.0132515325111797 1.0990791469307373 1.0101944722946077 1.1342810346598664 1.0309906121250285 1.0525811589876488 1.014183407525592 1.0483433846631052 1.0 14.193681645251138 -8.818298307500198 2.0064254520978193 1.0052319068486901 1.054526208196458 0.08810536946203207 0.037327502443862966 0.2761769777433818 2.1769294850524825 0.006040628698449208 0.006394422431065408 1.519503457089983e-09 8.818298307500198 0.0492943013477678 LDNS(ph)PNMNITQPSK ddPTM_A549_PD325901_60min_R1 2 LDNSPNMNITQPSK 14 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LDNS(1)PNMNITQPSK;LDNS(1)PNMNITQPSK 119.54 9.1487e-07 17497100.0 7049.8 6944.6 7441.7 8847.6 9267.2 7770.3 8269.6 8323.099999999999 8040.4 8338.3 9809.7 True False 7765.49050621154 7529.84581407582 7946.738512577395 9394.096157642496 8616.303842104417 7707.0212530347535 8584.304153298752 8157.089241154365 7702.489949244182 7811.818314976815 8603.1690888118 0.9026313938558248 0.8752409416046689 0.9236989800551433 1.0919343861158415 1.001526734294889 0.8958351478942262 0.9978072108872554 0.94814935716682 0.8953084461935163 0.908016364008919 1.0 13.070652477793857 -6.002944547547875 24.86131890168697 0.9617286598921014 0.8915695852326498 0.23466999844634673 0.055198625887882706 143.32387043897322 1210159.133713629 0.008232876728341106 0.02493499062078575 9.932428615359948e-07 6.002944547547875 -0.07015907465945159 LDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_A549_MK2206_60min_R1 2 LDNTPASPPRSPAEPNDIPIAK 22 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 2 LDNT(0.163)PAS(0.838)PPRS(0.999)PAEPNDIPIAK;LDNT(0.049)PAS(0.952)PPRS(1)PAEPNDIPIAK 120.93 1.0102000000000001e-15 205362000.0 13748.099999999999 16463.6 14677.4 12736.900000000001 20552.6 16421.9 16263.7 15164.6 21599.9 21843.6 22963.4 True False 16068.443171226123 17301.526918278785 16758.87602240975 15857.441071781173 17529.339765864588 18159.654558025013 19218.6037692573 17314.228489639765 16707.5571379525 16909.115588960947 17260.954022401434 0.9309128076218928 1.0023505592926494 0.9709125000078163 0.9186885644444236 1.0155487201411255 1.052065519348307 1.1134149215805342 1.0030864149901095 0.9679393801912263 0.9796165129120982 1.0 14.07522458481664 -6.78977468117512 24.977826199688177 1.002765818995096 0.9601325512118468 0.28151618187981964 0.04375924058487928 316.0423242144732 278593.35239428637 0.007180737151997125 0.013572167154587611 1.6226517363179719e-07 6.78977468117512 -0.04263326778324927 LDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_A549_PD325901_60min_R1 2 LDNTPASPPRSPAEPNDIPIAK 22 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 2 LDNT(0.014)PAS(0.986)PPRS(1)PAEPNDIPIAK;LDNT(0.09)PAS(0.911)PPRS(0.999)PAEPNDIPIAK 127.63 3.6491000000000003e-22 226290000.0 6444.2 6798.0 6630.5 6560.8 8335.4 7200.3 7772.3 9389.0 9369.8 10894.8 12177.7 True False 7098.410440030695 7370.891317583071 7080.485602435522 6966.045715342111 7749.950259568921 7141.663144051858 8068.079129665755 9201.729029471988 8976.019890357204 10206.9004686818 10679.920100800588 0.6646501446671482 0.6901635263198771 0.6629717765308708 0.6522563511331815 0.725656202145929 0.6687000536189878 0.7554437723799972 0.8615915608565469 0.8404575882252475 0.9557094409270601 1.0 13.382613233446644 -8.899804926904164 0.37084558042112986 1.007817935667307 0.6429120076331268 0.9259895153155145 0.03239415666710524 0.18894016231106306 0.07135115544126774 0.02350284537175099 0.019194912891098887 1.2594910133627705e-09 8.899804926904164 -0.3649059280341801 LDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_A549_MK2206_60min_R1 2 LDNTPASPPRSPAEPNDIPIAK 22 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 LDNT(0.151)PAS(0.845)PPRS(0.005)PAEPNDIPIAK;LDNT(0.054)PAS(0.935)PPRS(0.011)PAEPNDIPIAK 110.08 6.7921e-11 83735000.0 4939.299999999999 5035.0 5376.4 5854.5 7113.0 6911.4 6187.5 6470.0 9378.4 8813.400000000001 9762.900000000001 True False 5772.933085709093 5291.259993776195 6138.85436432091 7288.852762818494 6066.687122534126 7642.759760583984 7311.688657702716 7387.142313543993 7254.207374227367 6822.4468188278615 7338.50248766746 0.7866636409009404 0.7210272126592984 0.8365268492635126 0.9932343519767959 0.8266927936223157 1.0414604033217725 0.996346144188163 1.0066280315307208 0.98851330859644 0.9296783410911363 1.0 12.841269977971107 -6.176393484929773 0.8928910925967956 0.9963516029719213 0.7213982975712377 0.6827763939124065 0.058254464403261354 0.28725747700917065 0.34366357922875884 0.007918788794341922 0.05633950634096299 6.662028941935985e-07 6.176393484929773 -0.2749533054006835 LDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_A549_PD325901_60min_R1 2 LDNTPASPPRSPAEPNDIPIAK 22 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 LDNT(0.001)PAS(0.998)PPRSPAEPNDIPIAK;LDNT(0.006)PAS(0.992)PPRS(0.002)PAEPNDIPIAK 157.95 3.4095e-33 402900000.0 18668.5 18904.7 19423.1 18368.8 21628.3 19472.4 17850.8 18982.0 15749.5 15057.8 16562.6 True False 20563.71237697666 20497.86541505043 20741.268366588563 19503.399057428396 20109.202821584397 19313.823230453654 18530.121962332574 18603.38911890907 15087.603285361569 14107.047938219768 14525.505198971865 1.4156968790615412 1.4111636830711607 1.42792061842067 1.342700222145036 1.3844064317300133 1.3296489840381396 1.2756955237360117 1.2807395587332715 1.0386973174901684 0.9711915520307194 1.0 13.826300721174194 -8.505752958372478 0.9929423131649843 1.0052990844979204 1.3941547055348598 0.9412036402091906 0.04024983879280117 0.06946772142312885 0.13428136238904384 0.008221247482245302 0.00971827653526004 3.1206642203713193e-09 8.505752958372478 0.3888556210369394 LDNVPHT(ph)PSSYIETLPK ddPTM_A549_MK2206_60min_R1 3 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.96)PS(0.018)S(0.018)Y(0.004)IETLPK;LDNVPHT(0.996)PS(0.004)SYIETLPK;LDNVPHT(0.328)PS(0.328)S(0.328)Y(0.005)IET(0.011)LPK 120.52 7.8234e-10 16929900.0 1593.15 1712.9 1692.95 1892.6100000000001 2126.7200000000003 1568.88 1861.57 1666.9 2980.6 2454.58 2738.0 True False 1862.034771222127 1800.0792936125595 1933.035766698365 2356.2995349624907 1813.8823052489483 1734.8978402617408 2199.7931724476193 1903.1881796671541 2305.498859040143 1900.0886732201532 2058.0790350442508 0.9047440547792623 0.8746405084359921 0.9392427277005924 1.1449023554684954 0.8813472536101842 0.8429694927748189 1.0688574806848083 0.9247400839619523 1.1202188155959583 0.9232340648080599 1.0 11.007082670818646 -8.340851587858959 1.7213269222615528 1.054097659180036 0.9423393608296872 0.0 0.09832323331934051 0.4140198881676933 2.385957486986032 0.016831359327880012 0.0211288198512869 4.56192784799893e-09 8.340851587858959 -0.11175829835034878 LDNVPHT(ph)PSSYIETLPK ddPTM_A549_PD325901_60min_R1 3 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.828)PS(0.133)S(0.038)Y(0.001)IETLPK;LDNVPHT(0.798)PS(0.085)S(0.117)YIETLPK;LDNVPHT(0.954)PS(0.021)S(0.021)Y(0.004)IET(0.001)LPK 95.99600000000001 2.316e-06 59623200.0 4404.9800000000005 4303.2 4362.17 3878.5 5568.0 4886.6 4321.9 5104.0 5407.3 5058.4 5773.5 True False 4852.170326825118 4665.845766081711 4658.213088059148 4118.066136287401 5176.92288855721 4846.805149747069 4486.372269534425 5002.196715989458 5180.0499853922765 4739.011760728055 5063.396101231941 0.9582837743317313 0.9214854364142073 0.9199780137536127 0.8133012021882825 1.0224210757079912 0.957224173824328 0.8860401556265518 0.9879133719703278 1.0230386645303047 0.9359354208087804 1.0 12.30588963300827 -8.442104102432246 5.484739457549537 1.010674704080329 0.9259874787311042 0.19668851108354168 0.0535542984330288 0.16808611922738512 8.616298195567177 0.00785459263859238 0.009472675356062553 3.613232413759687e-09 8.442104102432246 -0.08468722534922479 LDNVPHTPS(ph)SYIETLPK ddPTM_A549_MK2206_60min_R1 4 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.056)PS(0.437)S(0.437)Y(0.068)IET(0.002)LPK;LDNVPHT(0.015)PS(0.453)S(0.453)Y(0.079)IET(0.001)LPK;LDNVPHT(0.007)PS(0.344)S(0.344)Y(0.295)IET(0.011)LPK;LDNVPHT(0.067)PS(0.326)S(0.326)Y(0.28)IET(0.001)LPK 74.12 0.00016367 29716170.0 2666.43 3464.0000000000005 2905.86 2886.43 3998.39 3053.57 3255.7 3001.88 4587.3 4019.2700000000004 4019.2200000000003 True False 3116.4581960454516 3640.3028040597274 3317.954643089348 3593.6054795767654 3410.232127635205 3376.6967506042824 3847.2185475365995 3427.4056828719386 3548.2838744128203 3111.314115495753 3021.136749171128 1.0315515167926363 1.204944729846629 1.0982470899404517 1.1894878576955177 1.1287910514381145 1.11769080017007 1.2734340968154167 1.1344755194587843 1.174486350340255 1.0298488197693685 1.0 11.560875772563076 -10.717461326536785 0.8961800648879281 0.9967613690724163 1.1538874712648337 0.4258706914824284 0.06014610500413719 0.3985768130258231 0.5501697174156683 0.04181256074620683 0.010001455036019024 1.916631729160088e-11 10.717461326536785 0.1571261021924174 LDNVPHTPS(ph)SYIETLPK ddPTM_A549_PD325901_60min_R1 2 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.05)PS(0.33)S(0.33)Y(0.287)IET(0.003)LPK;LDNVPHT(0.067)PS(0.319)S(0.319)Y(0.275)IET(0.021)LPK 65.71600000000001 0.00073129 4631900.0 1593.0300000000002 1924.5 1912.6399999999999 2693.4 2264.62 2033.02 2384.3 2498.1099999999997 2493.2 2636.5 2781.6 True False 1754.7532328732962 2086.6843690333385 2042.4432520386526 2859.765200844782 2105.560903714875 2016.4637591656315 2475.0358412390215 2448.283236320615 2388.419474336547 2470.030940052095 2439.4808340152017 0.7193142116165366 0.8553805137295599 0.837245049667779 1.1722843487717933 0.8631184448574989 0.8265954505765409 1.0145748254005746 1.0036083096791235 0.9790687596448087 1.0125231998591315 1.0 11.252358433316541 -6.025054516196604 24.583391830562235 0.98243463159584 0.8020886433046783 0.4525586696265904 0.08891428853772823 377.6174853968285 370517.43987816933 0.011697811722358209 0.03111492835831521 9.439423774784043e-07 6.025054516196604 -0.18034598829116166 LDNVPHTPSS(ph)YIETLPK ddPTM_A549_MK2206_60min_R1 1 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.003)PS(0.265)S(0.707)Y(0.025)IETLPK 86.625 4.5849e-06 17148000.0 1227.1 1275.8 1137.7 2302.4 1840.1 1632.0 974.22 1039.6 1623.3 1600.4 1944.9 True False 1434.204480285392 1340.7327706176106 1299.0429674666889 2866.4881033586653 1569.4237275657297 1804.6971567660755 1151.2231634920622 1186.966483641474 1255.6251418774286 1238.868528473928 1461.9276534907087 0.9810365628291381 0.9170992609766183 0.8885822525929427 1.9607592048171645 1.073530365075418 1.2344640669850666 0.7874693120027083 0.811918757270445 0.8588832278254792 0.8474212287563119 1.0 10.513656202975202 -7.7521489297165695 24.98422650326636 0.9106813859474653 1.1821084908620696 0.23114779754516435 0.2791615359009439 265.1406398991991 713023.7739832628 0.04293778717936483 0.06320002728836394 1.7695020506992732e-08 7.7521489297165695 0.2714271049146043 LDNVPHTPSS(ph)YIETLPK ddPTM_A549_PD325901_60min_R1 2 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.002)PS(0.177)S(0.816)Y(0.004)IETLPK;LDNVPHTPS(0.139)S(0.846)Y(0.011)IET(0.004)LPK 100.41 1.7869e-08 20445920.0 3691.5 3833.9 3764.08 3898.5 4193.389999999999 4728.1 4532.9 4282.8 4242.9 4090.7 4262.6 True False 4066.258362461333 4156.996208073222 4019.5331040518095 4139.301490864104 3898.860752810151 4689.595921196559 4705.401989998054 4197.376194208395 4064.5856680822017 3832.4125038767706 3738.3272228477103 1.0877213577263622 1.1119936699673354 1.0752223827506164 1.107260345099204 1.0429426105294637 1.2544637324777068 1.258691845176053 1.1227952889075876 1.0872739131129245 1.0251677489477204 1.0 11.868177141096123 -9.653862183554338 1.0087791188868644 1.0157749696664187 1.1316376812768933 0.32132093608113577 0.06527006934185865 0.4015293249139122 0.8488155581753526 0.021420918921822213 0.014200024472300541 2.218900440849002e-10 9.653862183554338 0.11586271161047468 LDNVPHTPSSYIET(ph)LPK ddPTM_A549_PD325901_60min_R1 1 LDNVPHTPSSYIETLPK 17 0 E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 E9PNJ7 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.003)PS(0.078)S(0.399)Y(0.05)IET(0.47)LPK 84.493 9.1817e-05 20490000.0 2503.2 2245.1 2922.1 3001.7 3389.2 3018.4 3018.9 3563.0 3849.6 3232.0 3295.9 True False 2757.3230212415574 2434.3024561791344 3120.4112780147584 3187.1081916446806 3151.15428410526 2993.8191511473315 3133.785891505469 3491.9331698805718 3687.814699344608 3027.930968423431 2890.5251944315155 0.9539176570934006 0.8421661436713036 1.0795309046349464 1.102605228207151 1.0901666901834437 1.035735359413164 1.0841579577104485 1.2080618347861647 1.2758285955953748 1.0475366117744354 1.0 11.497115931908072 -5.868551824077538 4.96888444735997 1.122952314333744 0.8994246591198022 0.4902996105228713 0.0790676382479352 0.14925186950156843 5.85319070424349 0.014797075690543037 0.04883676517804462 1.3534685725118848e-06 5.868551824077538 -0.2235276552139419 LDPAQS(ph)ASRENLLEEQGSIALR ddPTM_A549_PD325901_60min_R1 2 LDPAQSASRENLLEEQGSIALR 22 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 LDPAQS(0.569)AS(0.431)RENLLEEQGSIALR;LDPAQS(0.594)AS(0.406)RENLLEEQGSIALR 136.66 1.0533e-22 23541000.0 3035.1 3603.6000000000004 3645.9 3040.6 3829.5 3699.8 3639.0 3975.8999999999996 3672.7 3013.3999999999996 3609.2999999999997 True False 3343.2211176774713 3907.2880188352988 3893.3326985777353 3228.4109562963727 3560.529131057801 3669.6700554647787 3777.484136337205 3896.5975554667884 3518.3491911582864 2823.1334097299377 3165.378981237798 1.0561835209918937 1.234382373167646 1.2299736371710146 1.0199129315738131 1.1248350204390003 1.159314596203511 1.193374998294848 1.231005064026505 1.1115096208108584 0.8918784848397433 1.0 11.628162524164182 -9.888785160516974 0.8830317165255632 1.012696344665511 1.1553910000334613 0.4746614145316499 0.07715231356298358 0.3741412409522814 0.599017717134549 0.026040508608724113 0.013830473030376229 1.2918581799737936e-10 9.888785160516974 0.14269465536795023 LDPAQSAS(ph)RENLLEEQGSIALR ddPTM_A549_MK2206_60min_R1 1 LDPAQSASRENLLEEQGSIALR 22 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 LDPAQS(0.221)AS(0.779)RENLLEEQGSIALR 97.06299999999999 1.6079e-07 4347900.0 1479.4 1220.2 1421.9 1088.4 2115.8 1226.8 1484.7 1470.2 2119.5 1973.4 2078.8 True False 1729.08655214262 1282.3029681044115 1623.54680095006 1355.0580488601333 1804.5686227833125 1356.619161716068 1754.4507717319145 1678.6053522986672 1639.4366341460068 1527.6075694141764 1562.5765880387107 1.1065611537882483 0.8206336751236697 1.0390190236933454 0.8671946445588007 1.1548673112070247 0.8681937078161698 1.1227934586771438 1.0742547694289926 1.0491880184917963 0.9776209250207529 1.0 10.609711188341286 -6.743277658293744 24.999964250456653 1.0309799066608272 0.9542770680665739 0.11708180012017788 0.10095180839883557 379.6740168095263 522625.7563351359 0.012474934378541616 0.025928862809591724 1.8060191112952567e-07 6.743277658293744 -0.07670283859425331 LDPFADGGKT(ph)PDPK ddPTM_A549_MK2206_60min_R1 2 LDPFADGGKTPDPK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK 74.12 0.00037460000000000005 181725000.0 4407.6 5404.1 4826.8 4246.7 7044.1 5207.5 5297.4 5549.6 8258.8 7370.7 7176.700000000001 True False 5151.495124526031 5679.145607222629 5511.31282004765 5287.141690641608 6007.922221262847 5758.554193541267 6259.869009343736 6336.27279493721 6388.194986593551 5705.653750826532 5394.527323156345 0.954948379334908 1.0527605602894146 1.0216488841181686 0.9800935974401728 1.1137068850265095 1.0674807723787612 1.1604110303553117 1.174574233360236 1.1841992085519384 1.0576744558016524 1.0 12.39728083873808 -6.7669753235842744 24.959995463106104 1.101280206931988 1.0073402615441394 0.44581299908309024 0.05637136064836995 142.9859363246856 644686.7510060052 0.011115471477077251 0.02144046131812716 1.7101124801462622e-07 6.7669753235842744 -0.09393994538784867 LDPFADGGKT(ph)PDPK ddPTM_A549_PD325901_60min_R1 4 LDPFADGGKTPDPK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK 98.573 1.5127000000000001e-05 308033300.0 15243.3 15590.9 16738.4 15590.7 19402.9 16323.6 17695.9 17037.7 17611.3 16754.100000000002 18889.9 True False 16790.78859447564 16904.799859268318 17874.36848017597 16553.702129951274 18040.10724037116 16190.666013672322 18369.327158068027 16697.869707682912 16871.15830594547 15696.243266727399 16566.562052942107 1.0135348867687195 1.020416897920359 1.0789425363605605 0.9992237422013248 1.0889469512576002 0.9773099549521183 1.1088195063867075 1.007926065427527 1.0183862078341879 0.9474653350868205 1.0 14.015986620383773 LDPHLVLDQLR ddPTM_A549_MK2206_60min_R1 2 LDPHLVLDQLR 11 0 P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35579;P35580-2;P35580-5 MYH9;MYH10 Myosin-9;Myosin-10 0 ; 55.452 0.018287 3148100.0 498.98 275.3 443.12 383.27 649.02 471.46 324.39 574.76 637.8199999999999 663.1600000000001 674.27 False True 583.1956251102637 289.3115940986268 505.9610791455028 477.1711672056441 553.550017751595 521.34958427018 383.3274640278276 656.2339901286783 493.35478838924536 513.3516954153771 506.8301500946991 1.1506727155069525 0.570825539965549 0.9982852816687525 0.9414814156507593 1.092180521715542 1.028647534430949 0.7563233244040523 1.2947808846929563 0.9734124702270851 1.012867319198472 1.0 8.985358539230365 -5.922430078651911 24.999999523013972 0.9995583252885474 0.8416998013046478 0.09621815497249031 0.17289406523499032 48.638237040764984 15673.076032170013 0.02064041074317302 0.06417443251395534 1.1955559945198922e-06 5.922430078651911 -0.15785852398389955 LDPHLVLDQLR ddPTM_A549_PD325901_60min_R1 2 LDPHLVLDQLR 11 0 P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35579;P35580-2;P35580-5 MYH9;MYH10 Myosin-9;Myosin-10 0 ; 75.819 0.0013817999999999999 7985900.0 961.96 1103.95 1058.88 1018.45 1374.49 1137.99 777.06 1275.54 1105.5 853.29 1066.02 False True 1059.6174710424762 1196.9837408128624 1130.7419643627077 1081.3573434322302 1277.9505641330811 1128.7225867393815 806.6314435235474 1250.0983540582279 1059.039679479807 799.4131237766178 934.9062980575508 1.1333943019145738 1.2803248232468092 1.2094709028188637 1.1566478327068284 1.366929035335703 1.207310924190501 0.8627938919648748 1.3371375897836497 1.1327762810884552 0.8550729901355394 1.0 9.86867796643071 -7.551471915181684 24.997069862926367 1.073848023698392 1.2330493243479639 0.30352477320912186 0.13722470979490256 203.1299810531512 177582.04984941863 0.018259994455810055 0.02708418433623081 2.8088470085256094e-08 7.551471915181684 0.15920130064957183 LDPHNHVLYSNR ddPTM_A549_MK2206_60min_R1 1 LDPHNHVLYSNR 12 0 P31948;P31948-2;P31948-3;F5H783;F5GXD8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 51.211000000000006 0.026962 3437300.0 706.77 407.0 395.83 549.26 969.16 750.33 584.9 406.31 861.33 1128.4 985.96 False True 826.0554971325122 427.7145615624451 451.96464605110225 683.8287246572183 826.5978478384887 829.729422571256 691.1687589317681 463.90568677218835 666.2401302613723 873.4936562921647 741.1189208883228 1.1146058666838277 0.5771200134113109 0.609840922033628 0.9226977012509207 1.1153376665214658 1.1195631351264417 0.9326016911068966 0.6259531010436759 0.898965215275844 1.1786147022736573 1.0 9.533561247569274 -14.885931547291435 0.018796730097203337 2.1000393275001175 4.263682311028842e-06 0.09130920091804196 0.20117457385567883 6117.68999758551 9.098395097009035 664.9242080258322 386.81665754785354 1.3003745245553105e-15 14.885931547291435 -2.1000350638178062 LDPITGR ddPTM_A549_PD325901_60min_R1 2 LDPITGR 7 0 D6RAF8;Q14103-3;Q14103;D6RD83;D6RF44;H0YA96;H0Y8G5;Q14103-4;Q14103-2;D6RBQ9 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 ; 130.04 0.015831 8998200.0 3206.5 2910.7 2904.6 3419.6 3298.0 3024.1 3303.0 3162.1000000000004 3216.8 3665.5 4032.3 False True 3532.02151949946 3155.9949041025384 3101.723622778706 3630.820925524919 3066.3598574823422 2999.4727322371614 3428.697472470953 3099.0294348805382 3081.6090827233324 3434.0597044418555 3536.3526628557265 0.9987752512916036 0.8924434876791852 0.877096805236036 1.026713473365212 0.8670967377462153 0.8481825819416392 0.9695575637815946 0.8763349502529437 0.8714088713750701 0.9710738808693175 1.0 11.788046439363978 -10.95100688477231 1.2253436769632358 0.999780125870398 0.909135726775311 0.18190662814325897 0.056760412898096 0.5026343851193482 1.3468674634438014 0.03786199138499302 0.008917895664725686 1.1194201374119397e-11 10.95100688477231 -0.09064439909508704 LDPPPS(ph)PHANR ddPTM_A549_MK2206_60min_R1 2 LDPPPSPHANR 11 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 LDPPPS(1)PHANR;LDPPPS(1)PHANR 76.759 0.00036948 119597000.0 2359.29 2712.2 2751.2 2344.7200000000003 2977.0 2285.7 2060.84 2550.5 3296.2 2863.5 3230.9 True False 2757.480472897499 2850.2393952571597 3141.361529484358 2919.17650525848 2539.087243608054 2527.571256875134 2435.2679520549586 2912.0411855786633 2549.6159629497843 2216.6333612128788 2428.5783616962995 1.1354298944554007 1.1736246357998268 1.293498113558995 1.2020104235876954 1.0455035273535778 1.0407616640006998 1.002754529342832 1.1990723591659926 1.049838870000037 0.9127287783559997 1.0 11.245896322478007 -7.049304937100154 0.3881040885867498 1.0135558767892996 1.2363527228242028 0.46118878182051426 0.07908272382112283 1.2747440897197795 0.3124284517954391 0.025658751967567915 0.11039931156560556 8.926784751369872e-08 7.049304937100154 0.22279684603490324 LDPPPS(ph)PHANR ddPTM_A549_PD325901_60min_R1 2 LDPPPSPHANR 11 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 LDPPPS(1)PHANR;LDPPPS(1)PHANR 85.271 0.00013659 174262000.0 4686.700000000001 4837.1 5070.7 5430.6 5821.5 5525.9 5089.3 5471.7 4976.299999999999 5585.4 4935.1 True False 5162.490333833812 5244.739392803925 5414.828194596157 5766.035828212552 5412.617923084735 5480.898902506304 5282.976096471819 5362.562651034392 4767.163416549402 5232.736890789675 4328.11398617645 1.192780585336309 1.2117840263807933 1.251082622105277 1.3322282746315544 1.2505719443554577 1.2663480952700714 1.2206185219116454 1.239006797917491 1.1014412817627333 1.2090108780643247 1.0 12.079522779465913 -9.019886548356833 0.958581593027726 1.024380707388356 1.2549635214458164 0.3581574243110559 0.0676686247339442 0.12377508049707138 0.23545679102128492 0.010324058081607043 0.009499030308403055 9.55242093292424e-10 9.019886548356833 0.2305828140574604 LDPPPS(ph)PHANRK ddPTM_A549_MK2206_60min_R1 2 LDPPPSPHANRK 12 1 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 LDPPPS(1)PHANRK;LDPPPS(1)PHANRK 58.32 0.0027251 24822000.0 3241.8 3475.1000000000004 3071.0 2726.0 4521.2 3194.1000000000004 2588.3 2662.9 4421.2 4842.0 4471.7 True False 3788.9365855995266 3651.967746647794 3506.5139782809174 3393.870122374792 3856.137469197422 3532.097541928019 3058.5606065021316 3040.374229789227 3419.8052592056265 3748.1888370849542 3361.253477358428 1.1272391716727088 1.0864898381653247 1.043216169771477 1.0097037147707162 1.14723197615787 1.0508274861507485 0.9099464313253223 0.9045358376776224 1.0174196270057008 1.1151163880775259 1.0 11.71478362728985 -7.535763465666303 24.99004347226064 0.9917893386022233 1.0789555953856844 0.3354579990511908 0.06278982612169523 186.2040966269976 361143.5185927626 0.008276350938123801 0.012279849864826843 2.9123028440776366e-08 7.535763465666303 0.08716625678346113 LDPPPS(ph)PHANRK ddPTM_A549_PD325901_60min_R1 4 LDPPPSPHANRK 12 1 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 LDPPPS(1)PHANRK;LDPPPS(1)PHANRK;LDPPPS(1)PHANRK;LDPPPS(1)PHANRK 94.09 5.7883e-05 58937900.0 9356.400000000001 9992.3 10459.3 10811.6 11765.5 9455.400000000001 9813.2 11492.1 10696.199999999999 11405.199999999999 12173.6 True False 10306.254840182364 10834.386188979895 11169.130994880308 11479.40797707487 10939.131868771525 9378.39835732788 10186.64669598908 11262.881050121961 10246.675911037455 10685.073725576394 10676.324374808542 0.965337365029918 1.0148048905805362 1.0461588279609202 1.0752209818728675 1.0246159150599707 0.878429507018052 0.9541342449303164 1.0549399451273171 0.9597568930385002 1.0008195096421477 1.0 13.382127423676854 -7.0411277352855395 24.97886038947945 0.9770050959119082 1.0290855322850199 0.22001909255633234 0.04709294328647337 584.8910846990404 355232.12857892876 0.006994351443593649 0.012115557671675152 9.096456870523277e-08 7.0411277352855395 0.05208043637311166 LDPPPS(ph)PHSNR ddPTM_A549_MK2206_60min_R1 1 LDPPPSPHSNR 11 0 Q96P47;Q96P47-2;Q96P47-4;H0Y873 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 LDPPPS(0.997)PHS(0.003)NR 65.805 0.0014273 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LDPPPS(ph)PHSNR ddPTM_A549_PD325901_60min_R1 3 LDPPPSPHSNR 11 0 Q96P47;Q96P47-2;Q96P47-4;H0Y873 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 LDPPPS(0.987)PHS(0.013)NR;LDPPPS(0.982)PHS(0.018)NR;LDPPPS(0.911)PHS(0.089)NR 66.708 0.0012977 14774000.0 2355.1 2245.8 2469.9 2438.9 2648.8 2510.6 2484.7 2527.4 2310.4 2771.2 2747.6 True False 2594.188018267014 2435.0614476357846 2637.5222667152557 2589.54531385622 2462.757425863924 2490.1545059867763 2579.2566181800116 2476.989024293056 2213.301922632425 2596.2259590640497 2409.6626184714423 1.0765772761635088 1.0105404088396632 1.094560809673993 1.074650573074369 1.0220341250204403 1.0334037997262844 1.0703808070094685 1.02794017938674 0.9185111250289563 1.0774230131481863 1.0 11.234615450730951 -8.594390272888567 6.129558354761005 0.9616852043031141 1.0528981289119008 0.09880841925506234 0.04568284127991782 0.10824136047667915 7.122270929241455 0.006135373671525086 0.006966972904704192 2.5445426059059587e-09 8.594390272888567 0.09121292460878672 LDPPPS(ph)PHSNRK ddPTM_A549_MK2206_60min_R1 2 LDPPPSPHSNRK 12 1 Q96P47;Q96P47-2;Q96P47-4;H0Y873 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 LDPPPS(0.991)PHS(0.009)NRK;LDPPPS(0.968)PHS(0.032)NRK 55.66 0.0039673 11202300.0 2773.7 2593.63 2637.5 2834.9 3059.6 2338.9 2304.4 2331.66 3357.1 3579.1 3913.6000000000004 True False 3241.8327495457493 2725.634688710575 3011.537159790268 3529.4506272634976 2609.5368930276113 2586.400845563834 2723.0796513632545 2662.179945409272 2596.722210187099 2770.578824207096 2941.745110134833 1.1020100750323545 0.9265366599302846 1.0237247100080116 1.1997812506270225 0.887071039580314 0.8792063039905208 0.925668115154424 0.9049662175820709 0.8827148896214465 0.9418147121795024 1.0 11.522456533200769 -6.80961725948974 24.999994975592656 0.930566204447934 1.0504602396236193 0.4937699254928003 0.06972186590134637 94.12212323567317 48840.64696071012 0.010974024858410824 0.020738993172431018 1.5501821811688458e-07 6.80961725948974 0.11989403517568531 LDPPPS(ph)PHSNRK ddPTM_A549_PD325901_60min_R1 4 LDPPPSPHSNRK 12 1 Q96P47;Q96P47-2;Q96P47-4;H0Y873 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 LDPPPS(0.997)PHS(0.003)NRK;LDPPPS(0.944)PHS(0.056)NRK;LDPPPS(1)PHSNRK;LDPPPS(0.982)PHS(0.018)NRK 73.02199999999999 0.00035253 31422500.0 8396.3 7400.0 8042.400000000001 8655.6 9407.9 10082.2 8987.7 9867.2 9507.1 8808.9 11299.7 True False 9248.686194970633 8023.623970302258 8588.205626879944 9190.236753706135 8747.121559493065 10000.093905942758 9329.73184175815 9670.39095533134 9107.54964883082 8252.704550663722 9909.90853470002 0.9332766455498468 0.8096567129966088 0.8666281426118042 0.9273785647492184 0.8826642071281082 1.0091005250882943 0.941454889224219 0.9758304954551299 0.9190346830084555 0.8327730293136896 1.0 13.274656026519496 -6.833621456913062 1.4787894585822732 0.9628706929179445 0.8677699706853399 0.1716928460974395 0.056324070416505015 0.26545584352102175 1.1649649972317242 0.0066197104536133864 0.01640649715115979 1.466825809880017e-07 6.833621456913062 -0.09510072223260457 LDPVFDS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LDPVFDSPR 9 0 O94901-9;E9PHI4;H7C019;O94901-2;O94901-3;O94901-6;O94901-7;O94901-8;O94901;C9JK55;C9JJU6;C9K051;C9JR15;C9JS54;O94901-4 O94901-9 SUN1 SUN domain-containing protein 1 1 LDPVFDS(1)PR;LDPVFDS(1)PR 132.25 1.3317999999999999e-09 8384900.0 1105.2 1376.3 1235.0 855.99 1210.5 832.63 913.59 1218.7 1366.3 915.96 1123.0 True False 1217.3990903947615 1492.2856311252701 1318.814526658302 908.8625582056602 1125.4786559982947 825.8493373375967 948.3571673856308 1194.392072448345 1308.8791624362373 858.1261292812885 984.8781192835314 1.236091112756553 1.515198278758454 1.3390636880202993 0.9228172912063777 1.14275932621698 0.8385294801131096 0.9629183031048872 1.2127308436065456 1.3289757755897822 0.8713018519545839 1.0 9.943801388876876 -6.087415474530864 7.836431056118962 1.113029513084906 1.3882929173287752 0.3826156194617526 0.16570708629753542 0.26108844726940006 20.91997683198157 0.024614384263105946 0.06564247216432485 8.176821655543862e-07 6.087415474530864 0.2752634042438693 LDQPGNLPGS(ph)NR ddPTM_A549_MK2206_60min_R1 2 LDQPGNLPGSNR 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDQPGNLPGS(1)NR;LDQPGNLPGS(1)NR 95.428 0.00025914 7632800.0 3399.4 3850.6 3219.4 3965.8 4452.7 3866.8999999999996 3611.2 3776.3 5144.6 5499.9 6552.8 True False 3973.1356126494647 4046.5790927576204 3675.959329754992 4937.421178031526 3797.713728456021 4276.092791359521 4267.308295870068 4311.602089433725 3979.356314238051 4257.468770153556 4925.558911920365 0.8066365023132833 0.8215471919266822 0.7463029872323297 1.0024083086454318 0.7710218873365129 0.8681436701550622 0.866360218642952 0.8753528617837053 0.8078994456055727 0.8643625721032467 1.0 12.266071723689109 -10.845825503403232 0.8596157308606426 1.010487320046667 0.8399810219937379 0.08451847870401819 0.07525340896179171 0.4873932309426043 0.5719919613254151 0.057016395721025695 0.010923922169970906 1.426180508217171e-11 10.845825503403232 -0.17050629805292916 LDQPGNLPGS(ph)NR ddPTM_A549_PD325901_60min_R1 1 LDQPGNLPGSNR 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDQPGNLPGS(1)NR 56.482 0.016265 9921500.0 4683.9 5073.6 5128.1 6020.9 5588.1 6163.5 5829.2 5653.8 4840.0 6302.7 6692.1 True False 5159.406079895064 5501.170077800748 5476.123703770397 6392.797318543981 5195.611133898444 6113.3064995019095 6051.033395860635 5541.030523679706 4636.591631553381 5904.746446374486 5869.014124717111 0.8790924625937494 0.9373243888837814 0.9330568281831061 1.0892455159753285 0.8852613102458454 1.0416240904508938 1.0310136025021575 0.9441160654808929 0.7900120076430838 1.0060883005046606 1.0 12.518902464856852 -8.530442317994991 24.99761115019146 0.8990613746499045 0.9732677348046698 0.0011969663975074374 0.08230547838594716 300.87198908185127 994377.6427173379 0.01576662959070249 0.017894437429836582 2.9482050244874906e-09 8.530442317994991 0.07420636015476523 LDQPGNLPGS(ph)NRR ddPTM_A549_MK2206_60min_R1 4 LDQPGNLPGSNRR 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDQPGNLPGS(1)NRR;LDQPGNLPGS(1)NRR;LDQPGNLPGS(1)NRR;LDQPGNLPGS(1)NRR 116.04 7.305e-06 130037500.0 6587.91 8262.2 7624.25 6757.16 9603.01 7784.46 6437.870000000001 6802.19 11192.599999999999 10451.900000000001 11287.5 True False 7699.7881490644 8682.7106892905 8705.483294988046 8412.664503340437 8190.41995003042 8608.206390293655 7607.547645860941 7766.421263333201 8657.493970909456 8090.808530840199 8484.502230848055 0.9075120660666949 1.02336123593931 1.0260452597132388 0.9915330651636309 0.9653388881496894 1.0145800137804002 0.8966404202477934 0.915365575024066 1.020389144272063 0.9535984917799349 1.0 13.050614306816328 LDQPGNLPGS(ph)NRR ddPTM_A549_PD325901_60min_R1 2 LDQPGNLPGSNRR 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDQPGNLPGS(1)NRR;LDQPGNLPGS(1)NRR 114.28 8.4651e-06 252750000.0 6369.2 5412.3 6331.200000000001 6910.6 7139.5 6812.700000000001 6949.700000000001 6898.5 6546.299999999999 7189.9 6367.1 True False 7015.796495242782 5868.413515468503 6760.873304598414 7337.452066888673 6638.046149937895 6757.219629943488 7214.174636521761 6760.9040057314405 6271.181776371466 6735.928486963992 5583.98706437237 1.2564134576897243 1.0509360870319462 1.2107609180785814 1.31401666628205 1.1887646001708638 1.2101066051991272 1.2919397114206284 1.210766416145227 1.123065240674288 1.2062937125949627 1.0 12.447079884127373 -9.453651426357768 0.8775318173282964 1.021738053242519 1.2156560565843013 0.09776988240086126 0.08666366231210987 0.2599734107706321 0.42616189044368125 0.021088566214149312 0.014874571138281644 3.5184272340301066e-10 9.453651426357768 0.19391800334178222 LDQPVS(ph)APPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 LDQPVS(1)APPS(1)PR;LDQPVS(1)APPS(1)PR 66.982 0.005776 107615000.0 11054.099999999999 13930.0 12242.5 10391.8 15611.1 12718.400000000001 12496.3 12966.0 18333.300000000003 17765.3 16995.800000000003 True False 12919.761833202454 14638.977500159357 13978.67058909284 12937.79146650563 13314.727869899127 14064.252646209348 14766.7159552728 14803.970206709657 14180.836822264198 13752.106391463296 12775.273799782717 1.0113099754795232 1.1458836600753197 1.0941973384030792 1.0127212668213559 1.0422264194545547 1.10089637737929 1.1558825420652787 1.1587986636311032 1.1100221446921463 1.0764627519526972 1.0 13.64106659089675 -10.705832811486594 1.0478820241361946 1.0018693825502505 1.0943449302264765 0.07293855287732542 0.05420152011797657 0.4950977587025245 0.9953383000983144 0.032137237225778985 0.009096215231770299 1.9686440044224906e-11 10.705832811486594 0.09247554767622601 LDQPVS(ph)APPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 LDQPVS(1)APPS(1)PR;LDQPVS(1)APPS(1)PR 102.29 0.00024551 163461000.0 24013.3 37705.0 21850.8 49682.0 32203.0 26812.0 25585.0 27388.0 29143.0 28279.0 37654.0 True False 26451.11253834286 40882.53267570902 23333.726687534596 52750.74430399144 29941.17237431892 26593.65196149028 26558.65117564921 26841.72485452964 27918.22105751246 26493.459113875677 33022.7967083723 0.8009955296014248 1.238009398075725 0.7065945048082126 1.5974039016089 0.9066819094316112 0.8053119242546761 0.8042520265679307 0.8128240951719402 0.8454226728299583 0.8022778733080099 1.0 15.011174687154973 -6.950050404446792 24.999984907580313 0.8962746614621495 1.0923559128540763 0.18267342180741808 0.2247984547776019 153.3242050421377 76738.61367306969 0.029785865785973493 0.05628999044414942 1.1218882398044801e-07 6.950050404446792 0.19608125139192678 LDQPVSAPPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR 171.26 1.0792e-15 117259000.0 13812.099999999999 20679.1 16775.2 19301.0 26461.0 20383.3 21030.3 24316.0 42822.0 41107.0 40777.0 True False 16143.24480657635 21731.577862422502 19154.175606791927 24029.745866454825 22568.621952674745 22540.247276660517 24851.233289387535 27762.86746462684 33122.88537268238 31820.90014994859 30650.945512052374 0.5266801573944465 0.7090018757782642 0.6249130422179061 0.7839805743351701 0.7363107915806529 0.7353850558312265 0.8107819473176019 0.9057752379517983 1.0806480785285402 1.0381702625596385 1.0 14.903643958017199 -8.143907081204718 1.2195138498269076 1.0394863871431126 0.678881006290203 0.8445054787015585 0.06585827270644054 0.11656705398752358 0.34108530611008236 0.012687856413581814 0.017460707175530592 7.179478822541505e-09 8.143907081204718 -0.3606053808529096 LDQPVSAPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR 189.09 1.7074000000000003e-19 169623000.0 40140.0 44120.0 38094.0 50178.0 55162.0 41979.0 47856.0 44456.0 59893.0 61903.0 68304.0 True False 44214.98325049377 47838.14723915344 40679.287917831054 53277.38109749372 51287.61141856908 41637.13694209307 49677.186267808014 43569.29020494265 57375.90549351796 57994.43401556796 59903.041014730465 0.7381091594268325 0.7985929667141572 0.6790855226836949 0.8893935966354787 0.8561770913426114 0.6950755126414081 0.8292932282952403 0.7273301900354063 0.9578129010079627 0.9681383955333225 1.0 15.870341623723913 -8.829865899215779 6.052041276577546 0.9812174359250926 0.7797042525267819 0.6654702851832094 0.06275016272318758 0.08121853218735148 5.351707299720508 0.010600098480321257 0.01127462589583497 1.479565175507816e-09 8.829865899215779 -0.2015131833983107 LDQTMS(ph)ALKR ddPTM_A549_PD325901_60min_R1 1 LDQTMSALKR 10 1 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 LDQT(0.004)MS(0.996)ALKR 62.891000000000005 0.0028478 3232700.0 1924.4 2210.4 2520.8 2530.3 2662.2 2598.6 2186.6 2461.6 2751.4 2347.6 2308.9 True False 2119.7636713315965 2396.678165399474 2691.876646801821 2686.5908842717595 2475.2162560914167 2577.4378631630843 2269.8122595534323 2412.5014569121586 2635.7682262512344 2199.3721353560763 2024.9199373230144 1.0468382637063505 1.1835915688439176 1.3293743605293042 1.326764004222057 1.2223773446389703 1.2728591465055699 1.120939261704426 1.1914058489154562 1.3016654029965125 1.0861526398242152 1.0 10.983649151518364 -10.892923022984322 1.0497314157676059 0.9949939250008223 1.2304181231124869 0.3760788634875216 0.08610023557994013 0.3723421697155115 0.7025621528249847 0.06695107444971382 0.014686557989040195 1.2796080896387814e-11 10.892923022984322 0.2354241981116646 LDQVVES(ph)PAIPR ddPTM_A549_MK2206_60min_R1 2 LDQVVESPAIPR 12 0 H0YBS0;P16157-2;P16157-12;P16157-21;P16157;P16157-3;P16157-16;P16157-5;P16157-8;P16157-15;P16157-10;P16157-13;P16157-4;P16157-7;P16157-6;P16157-9;P16157-11;P16157-14 H0YBS0 ANK1 Ankyrin-1 1 LDQVVES(1)PAIPR;LDQVVES(1)PAIPR 94.09 0.00026271 1935890.0 1973.69 2368.52 1816.8200000000002 1938.8 2497.06 1913.99 1886.8999999999999 1951.62 3304.1000000000004 3517.8 3150.75 True False 2306.800619912373 2489.0675512331263 2074.4723953175953 2413.806087036039 2129.745781835381 2116.5271513962643 2229.7253055707865 2228.2681115855853 2555.726625563491 2723.126536781794 2368.331818723766 0.9740191816345436 1.05097923000267 0.8759213463742914 1.0192009700468316 0.8992598777746638 0.8936784679677222 0.9414750449843338 0.9408597621199645 1.079125232941686 1.1498078585327702 1.0 11.20965551076842 -8.747489087264597 24.999510685677784 1.0373646933584755 0.9488898742752641 0.4170583960088634 0.062330649575941775 189.41325016024194 339436.3150280497 0.009296696679308677 0.010515552331185257 1.7885904713535257e-09 8.747489087264597 -0.08847481908321142 LDQVVES(ph)PAIPR ddPTM_A549_PD325901_60min_R1 1 LDQVVESPAIPR 12 0 H0YBS0;P16157-2;P16157-12;P16157-21;P16157;P16157-3;P16157-16;P16157-5;P16157-8;P16157-15;P16157-10;P16157-13;P16157-4;P16157-7;P16157-6;P16157-9;P16157-11;P16157-14 H0YBS0 ANK1 Ankyrin-1 1 LDQVVES(1)PAIPR 91.712 0.00026904 3871600.0 2235.1 2615.1 2536.7 2708.8 2849.3 2485.1 2605.6 2304.6 2509.5 3023.9 3124.9 True False 2462.005706606345 2835.4836546942493 2708.8557164162885 2876.1164238688466 2649.1749975513735 2464.8621695322777 2704.757533839029 2258.632945076274 2404.0344420213264 2832.9704379379987 2740.5571103732027 0.8983595697704964 1.0346376814997735 0.9884325001522785 1.049464144710775 0.966655643673346 0.899401862563856 0.9869371171289699 0.8241510226249942 0.8772064748885859 1.0337206355653035 1.0 11.420253483933102 -7.0023861109046495 24.396223063285575 0.9319666420894591 0.9969919813476009 0.13297133719752563 0.06582321963967576 97.04062874469177 992199.6586305298 0.009569591883376749 0.017863585655844984 9.945208422421429e-08 7.0023861109046495 0.0650253392581418 LDRETEELHHDR ddPTM_A549_MK2206_60min_R1 2 LDRETEELHHDR 12 1 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 ; 65.495 0.020874 36726000.0 2194.72 2587.0 2109.3500000000004 2288.9 2746.5 2418.5 2027.65 2234.3 3173.1000000000004 3262.7 3035.0 False True 2565.1350802476995 2718.6672500295945 2408.48754805824 2849.6806027526263 2342.4934882665493 2674.4240647296288 2396.047758673279 2551.018867256778 2454.397916399476 2525.6538039564393 2281.3257382612496 1.1244054442671392 1.191704982955074 1.055740312601702 1.249133587088952 1.0268123700966614 1.1723113538218288 1.0502874352785179 1.1182177207193038 1.0758647374355825 1.1070991580016138 1.0 11.15565674070379 -9.862866195537565 0.2051305527222866 0.939299791037342 1.170254714688836 0.09710990349032 0.06825678164145926 3.041525092342808 0.29783102022733743 0.21549821933300115 0.08498547696948501 1.371304194644571e-10 9.862866195537565 0.23095492365149406 LDRETEELHHDR ddPTM_A549_PD325901_60min_R1 2 LDRETEELHHDR 12 1 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 ; 96.37100000000001 0.00091486 33729000.0 4231.2 4694.3 4399.4 4732.9 5128.5 4914.6 4939.1 5070.4 5538.799999999999 5183.3 5460.6 False True 4660.748309155192 5089.905135647281 4697.969739741321 5025.240483804215 4768.29185236452 4874.577127030436 5127.060153279225 4969.2668943481485 5306.023497695843 4856.025553412488 4788.980817595414 0.9732234240803227 1.0628368184199501 0.9809957313840755 1.0493340180734798 0.9956798813737404 1.0178735962191638 1.0705952578556295 1.0376460219031025 1.1079650764523297 1.0139997920999688 1.0 12.225502941489834 -7.686055684119388 8.052581872651066 1.0523832651075309 1.0147672316297554 0.15655077072072077 0.036428891559729115 0.3910534416369764 36.84045577146413 0.006668474533808718 0.009891738032327946 2.0603657215496634e-08 7.686055684119388 -0.037616033477775535 LDRPAGGPS(ph)AESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_A549_PD325901_60min_R1 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.374)AES(0.374)PRPS(0.085)S(0.085)AY(0.082)NGDLNGLLVPDPLCSGDSTSANK 40.84 0.008634999999999999 2891600.0 331.11 377.1 588.45 496.45 551.34 605.06 604.02 613.87 587.12 661.18 565.0 True False 364.724043449701 408.87954043256525 628.3857556373099 527.1145889802451 512.6157804197431 600.1325919670036 627.0063116324268 601.6258812783009 562.4453881647978 619.4329819623156 495.5085818300935 0.7360599933560029 0.8251714610520454 1.2681632138770487 1.0637849843758895 1.0345245253401396 1.211144698544868 1.2653793185915456 1.2141583482899077 1.1350870777807367 1.2500953660066274 1.0 8.952766233778824 -5.629549863908263 6.196482537009022 1.1062015754935555 0.758628967035175 0.6485852414146167 0.10228836357021945 0.09920223265075227 4.95700826371831 0.014785092786368338 0.05900058320770749 2.3466598133789e-06 5.629549863908263 -0.34757260845838045 LDRPAGGPSAES(ph)PRPSSAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_A549_MK2206_60min_R1 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.058)AES(0.314)PRPS(0.314)S(0.314)AYNGDLNGLLVPDPLCSGDSTSANK 96.602 3.4046999999999995e-11 40803000.0 345.71 273.37 228.15 420.08 364.29 441.74 284.2 258.93 567.4 470.04 630.24 True False 404.0573962019907 287.2833653423234 260.50510066583877 522.9996188581076 310.70342357204504 488.4846335967194 335.835461255614 295.63412043986796 438.8848059516133 363.8576375430423 473.7340142608797 0.8529203815613735 0.6064233445228611 0.5498973956351416 1.1039942311807442 0.6558604917926463 1.0311369226017129 0.7089114379502279 0.6240508630167007 0.9264371836089538 0.7680631463854952 1.0 8.887933451400064 -9.225265660085638 0.27291676815133764 1.062276544015531 0.7096697849637355 0.0 0.1861374288018525 2.0080158357051663 0.4421331248270525 0.2618131844677281 0.15930344132762467 5.95297885466092e-10 9.225265660085638 -0.3526067590517956 LDRPAGGPSAES(ph)PRPSSAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_A549_PD325901_60min_R1 3 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.074)AES(0.307)PRPS(0.307)S(0.307)AY(0.004)NGDLNGLLVPDPLCSGDSTSANK;LDRPAGGPS(0.134)AES(0.567)PRPS(0.134)S(0.134)AY(0.033)NGDLNGLLVPDPLCSGDSTSANK;LDRPAGGPS(0.139)AES(0.581)PRPS(0.139)S(0.139)AY(0.002)NGDLNGLLVPDPLCSGDSTSANK 78.418 1.4618e-07 69779500.0 2290.06 2903.6 2361.08 2288.22 2306.69 2685.71 2852.3900000000003 2721.99 2460.76 2753.38 2653.07 True False 2522.545205346931 3148.2965621850867 2521.3170871274365 2429.5581524753284 2144.6760520484963 2663.8384682043115 2960.9392623376993 2667.6977740901552 2357.3428147234094 2579.5311169052306 2326.7592091964016 1.0841453620884771 1.3530822397700626 1.0836175385755666 1.0441811696167866 0.9217438760193876 1.144870710160132 1.2725593824383428 1.1465293716454246 1.013144293318418 1.1086369000753324 1.0 11.184106202035005 -2.000000000001091 0.06617471995159367 0.8290647546858877 1.7147461701252773 0.0 0.11817598470975463 276.55872103195003 1.3199009980902807 3.216316803621508 23.014220464381395 0.009999999999974876 2.000000000001091 0.8856814154393896 LDRPAGGPSAESPRPS(ph)SAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_A549_MK2206_60min_R1 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.073)AES(0.073)PRPS(0.292)S(0.292)AY(0.271)NGDLNGLLVPDPLCSGDSTSANK 59.993 3.8184e-05 31822000.0 279.18 198.36 339.31 272.45 281.63 469.59 449.4 0.0 388.17 375.36 426.79 True False 326.2987587043237 208.45567673593763 387.42926016623204 339.2002622307451 240.2026000730052 519.2817021113859 531.0501628721776 0.0 300.25011478011567 290.56591530115816 320.80626419522855 1.0171209079189072 0.6497868028196628 1.2076736130391135 1.0573367795097754 0.7487466015527318 1.6186769401590424 1.6553609518952654 0.0 0.9359234787179738 0.9057364139383904 1.0 8.325558502500094 -4.371611450121644 19.77561506578727 0.9801222366951735 1.0055823809594673 0.0 0.432118222099513 0.0 0.0 0.05302036307399749 0.0 4.249996279643952e-05 4.371611450121644 0.02546014426429377 LDRPAGGPSAESPRPS(ph)SAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_A549_PD325901_60min_R1 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.235)AES(0.194)PRPS(0.284)S(0.284)AY(0.004)NGDLNGLLVPDPLCSGDSTSANK 113.46 2.2988000000000004e-17 46002000.0 585.67 363.08 501.23 419.31 858.91 642.18 755.75 591.01 531.91 800.92 722.92 True False 645.1267872525333 393.67802582937077 535.246481940843 445.2098263778961 798.5831246786412 636.9502989941001 784.5104798122685 579.2218419116241 509.55567246685126 750.3497745141373 634.0054229674535 1.0175414340038709 0.6209379471657613 0.8442301320320406 0.7022176944387917 1.2595840599294625 1.0046448751382333 1.2373876490525557 0.9135913052613721 0.8037086971305121 1.1835068712853207 1.0 9.308351370288921 LDRS(ph)FLEDTTPAR ddPTM_A549_MK2206_60min_R1 1 LDRSFLEDTTPAR 13 1 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 LDRS(1)FLEDTTPAR 52.522 0.0066625 1578300.0 315.75 374.9 288.53 333.41 396.62 496.95 389.77 418.52 527.29 398.56 589.51 True False 369.04088065366517 393.9808086726304 329.4478925930946 415.09546496734356 338.27772339933705 549.5369191512879 460.58616373539974 477.84649166374504 407.8596569091047 308.5250191880582 443.118397351693 0.8328268084991421 0.8891095721307568 0.7434759977514978 0.9367597180531679 0.7634025701055551 1.240158211520008 1.0394200883739046 1.0783720434980928 0.9204304297602787 0.6962586546439166 1.0 8.791548415531253 LDRS(ph)FLEDTTPAR ddPTM_A549_PD325901_60min_R1 2 LDRSFLEDTTPAR 13 1 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 LDRS(0.99)FLEDT(0.005)T(0.005)PAR;LDRS(1)FLEDTTPAR 51.875 0.007041899999999999 4851600.0 1245.67 1211.21 996.4300000000001 1022.6700000000001 1288.5900000000001 1066.53 940.9200000000001 1282.01 1414.4299999999998 1327.14 1124.7 True False 1372.1295013862139 1313.2829174418653 1064.0537318203494 1085.8380032479154 1198.0838837941697 1057.844533286894 976.7272254911801 1256.4393048326112 1354.9864259128208 1243.344153908871 986.3690300607187 1.3910914268078232 1.3314316218555873 1.0787582531406614 1.1008435688426608 1.2146406134835948 1.0724632475755806 0.9902249520456404 1.2738024679822597 1.3737114453293517 1.2605263507029751 1.0 9.945983692598158 -11.134452284490084 1.5198035338928264 1.0006784497289047 1.2177362730633585 0.0 0.1473631997052497 0.47337898515363214 1.9684320004994726 0.10184316478213926 0.022180018310959292 7.337493263106583e-12 11.134452284490084 0.21705782333445378 LDRS(ph)FLEDTTPARDEK ddPTM_A549_MK2206_60min_R1 2 LDRSFLEDTTPARDEK 16 2 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 LDRS(0.951)FLEDT(0.024)T(0.024)PARDEK;LDRS(1)FLEDTTPARDEK 68.567 0.00039623 7221300.0 1666.22 2059.23 2142.05 1521.69 2946.46 2379.42 2072.09 2233.41 3487.45 3090.83 3712.6 True False 1947.4372008321438 2164.0360113175284 2445.8248997644537 1894.5041183112587 2513.0396371519614 2631.2086450688344 2448.5619314326004 2550.002707031265 2697.5481433132763 2392.609356325338 2790.6589574526224 0.697841345188883 0.7754569957530426 0.8764327483416529 0.6788733941321893 0.9005183633925379 0.94286284536562 0.8774135316297137 0.9137636471921191 0.9666348287057119 0.8573635807183572 1.0 11.446390110085353 -6.276660571455576 0.2880257037936501 1.0080365587858189 0.6083115236853958 0.47714098570165453 0.07202328293047967 1.7574397464474443 0.16615923827999465 0.02810349138619506 0.23281044074393206 5.288584265278272e-07 6.276660571455576 -0.3997250351004231 LDS(ph)PTMSR ddPTM_A549_MK2206_60min_R1 2 LDSPTMSR 8 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 LDS(0.991)PT(0.009)MSR;LDS(0.948)PT(0.052)MSR 154.85 0.00044058 29185000.0 5175.299999999999 5573.1 5696.5 5143.4 6705.9 5697.0 5566.200000000001 5191.7 6718.7 7774.9 8472.1 True False 6048.764116063066 5856.7469853652665 6504.349357628539 6403.533230895996 5719.470993252015 6299.852758637461 6577.506489940176 5927.639373914425 5196.925177559223 6018.544690097434 6368.24375193513 0.9498323794884604 0.9196800897556043 1.021372549637732 1.0055414774207005 0.8981237553154321 0.9892606194169489 1.0328603530512563 0.9308122623467706 0.8160688221112805 0.9450870482569967 1.0 12.636679842430873 -8.50926724888138 24.298775922919077 0.911053978923797 0.9731308884890038 0.1569658111615424 0.05585955133233586 706.5377424073184 1261289.7125104072 0.012369170934423525 0.014629192392596932 3.09551384741758e-09 8.50926724888138 0.06207690956520673 LDS(ph)PTMSR ddPTM_A549_PD325901_60min_R1 2 LDSPTMSR 8 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 LDS(0.721)PT(0.265)MS(0.013)R;LDS(0.963)PT(0.037)MSR 95.311 0.0025131 31213000.0 7639.5 8180.6 7549.299999999999 7171.5 8904.0 7839.599999999999 7626.400000000001 7591.4 8738.2 9373.1 10342.1 True False 8415.056416097344 8870.007871818192 8061.640895628765 7614.467267341787 8278.613757132438 7775.756896811096 7916.626825326209 7439.983571661909 8370.96384190904 8781.280866376745 9070.087263973468 0.9277811967170463 0.9779407423178833 0.8888162441005096 0.8395142235936994 0.9127380493917875 0.8572968120931457 0.8728280770540299 0.8202769560127214 0.9229198791899879 0.9681583661555422 1.0 13.146900715757246 -9.80255231809263 1.0051595485549722 0.9881522278067708 0.8893391246573006 0.4105194148308391 0.04279346528097021 0.30849113591112143 0.6403160797145763 0.014743873290040115 0.008920096729170891 1.5756062029784997e-10 9.80255231809263 -0.09881310314947023 LDS(ph)SGER ddPTM_A549_PD325901_60min_R1 2 LDSSGER 7 0 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 LDS(0.5)S(0.5)GER;LDS(0.911)S(0.089)GER 119.07 0.006801899999999999 137370000.0 7973.5 8246.0 8638.2 8406.7 9330.3 8565.3 7022.2 7524.5 8008.9 8156.799999999999 9087.0 True False 8782.96385021954 8940.919359339521 9224.440197716394 8925.962765999044 8674.971915787592 8495.54703661616 7289.433663695288 7374.41794464394 7672.313784699981 7641.778255951804 7969.356607239045 1.1020919608794324 1.1219123199001972 1.157488697310556 1.120035556934553 1.0885410633911894 1.066026713988322 0.9146828311176158 0.9253467134279465 0.9627268753076952 0.9588952574929722 1.0 12.960247539992803 -7.516423306825136 3.216906186041322 0.9722615744761683 1.1197340396475826 0.8691788127198934 0.030214494129202726 0.08033816802490823 1.7211248598442417 0.00537104678028584 0.008513737888227848 3.044925653767229e-08 7.516423306825136 0.1474724651714142 LDS(ph)SIISEGK ddPTM_A549_PD325901_60min_R1 1 LDSSIISEGK 10 0 G5EA36;P30260;P30260-2;I3L328 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LDS(0.533)S(0.467)IISEGK 98.75399999999999 1.7585e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LDS(ph)SPSVSSTLAAK ddPTM_A549_PD325901_60min_R1 2 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.825)S(0.175)PSVSSTLAAK;LDS(0.777)S(0.223)PSVSSTLAAK 263.12 2.0343e-83 133191300.0 22513.3 23550.9 22814.5 23422.0 27539.6 21611.5 24775.1 24057.4 26782.1 26106.8 28983.8 True False 24798.8336425845 25535.616994890726 24362.829164733466 24868.723744778537 25605.31350246231 21435.503109269997 25717.929987954903 23577.556284334783 25656.541474261543 24458.41219258565 25418.976343446135 0.9756031599194778 1.0045887233958053 0.9584504440917434 0.9783526845757708 1.0073306319065922 0.8432874250971475 1.011761041848007 0.9275572692530504 1.0093459755265346 0.9622107461023641 1.0 14.633618311781767 -8.798364237853272 24.979363411234853 1.0044133922385576 0.9641521461365721 0.04109599392465446 0.04661616708668754 224.20924930063052 151674.73566479687 0.007267294681958448 0.007736742278052192 1.5908739194835932e-09 8.798364237853272 -0.04026124610198556 LDS(ph)SPSVSSTLAAKDDPDGK ddPTM_A549_MK2206_60min_R1 3 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.534)S(0.438)PS(0.012)VS(0.005)S(0.005)T(0.005)LAAKDDPDGK;LDS(0.541)S(0.449)PS(0.009)VSSTLAAKDDPDGK;LDS(0.503)S(0.416)PS(0.076)VS(0.003)S(0.001)T(0.001)LAAKDDPDGK 134.81 1.451e-17 25579300.0 10440.4 13483.800000000001 12651.4 11389.8 16344.900000000001 11655.199999999999 13024.0 12196.5 19384.1 18306.0 18782.9 True False 12202.484276726915 14170.067826033655 14445.558757676057 14180.30151130755 13940.5868619581 12888.545527904398 15390.292214613359 13925.391225214726 14993.632300046986 14170.66188593084 14118.58754833186 0.8642850593201629 1.0036462767628536 1.0231589178609322 1.0043711145158414 0.9873924579378487 0.9128778274585411 1.0900730800392107 0.9863161720352146 1.0619782077151558 1.0036883532025223 1.0 13.7853081452872 -7.761615590026063 24.999999999773717 1.0302520802364161 0.9729892665133816 0.26789217719061864 0.05064619374937048 5.424605887390981 769671.5880356634 0.00774272644244441 0.011068601831932527 1.7313481609436075e-08 7.761615590026063 -0.057262813723034545 LDS(ph)SPSVSSTLAAKDDPDGK ddPTM_A549_PD325901_60min_R1 1 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.492)S(0.492)PS(0.015)VSS(0.001)TLAAKDDPDGK 150.59 6.455e-22 41430000.0 6018.2 5482.9 5965.4 6642.2 7578.1 6579.3 6199.3 5941.9 7575.6 6398.4 7329.9 True False 6629.163233635319 5944.963225239221 6370.247916864318 7052.473608469297 7045.840399025752 6525.720362159963 6435.217753887126 5823.384143169627 7257.223876858636 5994.403932042225 6428.368768064433 1.031235679348144 0.9248012115878093 0.9909586936753139 1.0970860358082382 1.0960541706986169 1.0151440587197118 1.001065431382331 0.9058883137040432 1.1289370816608844 0.9324922306607383 1.0 12.650236977302606 -6.057548846161929 8.925101046786788 1.047848389258388 0.9730153253742976 0.0 0.0713798510826196 0.5342667880673146 79.83297097254462 0.009849026525787959 0.026245870748664437 8.758931982439045e-07 6.057548846161929 -0.0748330638840905 LDS(ph)SPSVSSTLAAKDDPDGKQEAK ddPTM_A549_MK2206_60min_R1 2 LDSSPSVSSTLAAKDDPDGKQEAK 24 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.391)S(0.391)PS(0.054)VS(0.054)S(0.054)T(0.054)LAAKDDPDGKQEAK;LDS(0.386)S(0.386)PS(0.056)VS(0.059)S(0.056)T(0.056)LAAKDDPDGKQEAK 54.441 0.0010445 10522900.0 2551.3 3155.8 3217.7 3399.3 4313.8 2904.1000000000004 3124.9 3102.4 4304.1 4025.5 4995.799999999999 True False 2981.897066703708 3316.4167404883647 3674.0182441922866 4232.128652600377 3679.2457344563054 3211.4099344144365 3692.653880639225 3542.17470070153 3329.2282222353488 3116.13675416883 3755.2049829342795 0.7940703850402551 0.8831519865253666 0.9783802111706418 1.1270033651514368 0.979772276394185 0.8551889840924404 0.9833428261361706 0.943270664797028 0.8865636462896689 0.8298180174798107 1.0 11.874675946007827 -5.478214761855645 3.165637918467557 0.9572419157332545 0.7977997550210989 0.28131042322248767 0.0765358342446605 0.24854814181295887 4.525466827732417 0.01012750718421102 0.07393091697405348 3.3249509133465136e-06 5.478214761855645 -0.15944216071215556 LDS(ph)SPSVSSTLAAKDDPDGKQEAK ddPTM_A549_PD325901_60min_R1 1 LDSSPSVSSTLAAKDDPDGKQEAK 24 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.492)S(0.459)PS(0.009)VS(0.013)S(0.013)T(0.013)LAAKDDPDGKQEAK 60.79 9.0666e-05 6893700.0 3175.3 2968.7 2880.1 2816.0 3258.2 2885.5 3037.3 3237.3 3004.2 3522.1 2942.5 True False 3497.6541184676857 3218.882767653557 3075.5609054482384 2989.937924399979 3029.3552721797932 2862.0014446844752 3152.886113574334 3172.72951188728 2877.943921386917 3299.714004914653 2580.591154044337 1.3553693358152124 1.2473431766240386 1.1918047927228526 1.1586251931903695 1.1738997351177256 1.1090487697747502 1.2217689379555876 1.229458415725767 1.115226608785574 1.278665936579414 1.0 11.333485876402081 -10.200365844729928 0.031072429288204497 1.922547360006613e-09 2.145661811668209 0.0 0.09771077246894441 95.57155450793495 0.8796396389089538 33.79724477649187 26.972139903019674 6.304260569992436e-11 10.200365844729928 2.1456618097456617 LDS(ph)SPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK ddPTM_A549_MK2206_60min_R1 1 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK 35 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.334)S(0.334)PS(0.083)VS(0.083)S(0.083)T(0.083)LAAKDDPDGKQEAKPQQAAGMLSPK 57.82899999999999 0.00039816 19836000.0 868.88 991.85 1073.7 1127.4 1212.8 872.56 913.58 911.37 1424.8 1377.1 1749.2 True False 1015.525701923536 1042.330928466121 1225.9668051059004 1403.6130506109089 1034.3987265864448 964.8937200415489 1079.5656604289368 1040.5594884535683 1102.0850749380652 1066.0121535625128 1314.8253645359396 0.7723654633647566 0.7927523734941072 0.9324179759329474 1.067528120821054 0.786719479625745 0.733856941056277 0.8210715198744006 0.7914050919004199 0.8381988244705335 0.8107633015877785 1.0 10.360655477754591 -10.524615588308437 0.8629387193446116 0.998795193270524 0.840018955746986 0.0 0.10309618131511133 0.6174048922973641 0.834056982719338 0.06009720281060344 0.017568294827391653 2.98802627220161e-11 10.524615588308437 -0.15877623752353798 LDS(ph)SPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK ddPTM_A549_PD325901_60min_R1 4 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK 35 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.505)S(0.443)PS(0.016)VS(0.016)S(0.016)T(0.004)LAAKDDPDGKQEAKPQQAAGMLSPK;LDS(0.45)S(0.407)PS(0.086)VS(0.019)S(0.019)T(0.019)LAAKDDPDGKQEAKPQQAAGMLSPK;LDS(0.488)S(0.458)PS(0.013)VS(0.013)S(0.013)T(0.013)LAAKDDPDGKQEAKPQQAAGMLSPK;LDS(0.525)S(0.467)PS(0.005)VSS(0.001)T(0.001)LAAKDDPDGKQEAKPQQAAGMLSPK 133.85 4.1627e-30 155269900.0 9181.59 8197.77 9588.4 10092.679999999998 11366.55 11237.35 10834.76 10930.800000000001 11912.0 10966.970000000001 12689.66 True False 10113.698257670683 8888.624847976316 10239.126483733173 10716.081921460656 10568.202740468734 11145.836747331514 11247.082720808163 10712.776618953283 11411.380065095851 10274.513642565193 11128.912266382424 0.9087768881260354 0.7986966412545601 0.9200473719846759 0.9629046994854276 0.9496168616938918 1.0015207668587895 1.0106183292308542 0.962607698086885 1.0253814381812218 0.9232271219894375 1.0 13.442024970919073 -6.36198669357954 0.9713974956259961 1.0077604013918036 0.8468660398298814 0.5347951136914657 0.0416541992263259 0.22548365332220952 0.3599643111765957 0.004888107549897881 0.02518353850796401 4.3452353740614634e-07 6.36198669357954 -0.16089436156192216 LDS(ph)SPVSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 LDSSPVSSPR 10 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 LDS(0.5)S(0.5)PVS(0.339)S(0.661)PR 96.745 0.00061035 10216000.0 470.87 529.39 589.44 560.38 660.43 648.04 222.46 760.11 1018.3 775.54 616.76 True False 550.3413443337803 556.3336897924881 673.0314553428539 697.6731251564138 563.2816218663307 716.6151626658628 262.8781024311184 867.857920239247 787.6566758909546 600.3449753640775 463.6014702899529 1.187100084021686 1.2000257234830105 1.4517457309225443 1.504898430801059 1.2150125872423017 1.545756880834882 0.56703466075443 1.871991302565235 1.6989952068062382 1.2949591704025452 1.0 8.856741331564882 LDS(ph)SPVSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LDSSPVSSPR 10 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 LDS(0.5)S(0.5)PVS(0.349)S(0.651)PR 114.24 0.00011196 13961000.0 879.16 600.49 1009.5 801.91 1007.9 927.89 847.79 668.09 980.13 1046.4 1087.7 True False 968.4116759966145 651.0953997198384 1078.0107406166442 851.4421594302511 937.1085810662372 920.3335714809486 880.0531123784889 654.764420843534 938.938544593888 980.3301254202582 953.9197954983941 1.0151919276301933 0.6825473197981606 1.130085302458176 0.8925720626076309 0.9823767003143345 0.9647913543927478 0.922565100893716 0.6863935772518899 0.9842950623572301 1.027686111606548 1.0 9.89772416093109 -8.96258714475247 24.999994342123053 0.9930717222600878 0.908599932586477 0.10068573303734896 0.12475125559464859 289.74605793496283 193614.9721987723 0.02016822429996921 0.021418820193909973 1.0899657598644992e-09 8.96258714475247 -0.0844717896736108 LDS(ph)SPVSSPR ddPTM_A549_MK2206_60min_R1 1 LDSSPVSSPR 10 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 LDS(0.576)S(0.423)PVS(0.001)SPR 49.978 0.028089 38751000.0 3019.7 3286.8 2661.7 2850.3 3577.5 2997.9 2498.8 3019.0 3693.0 3863.3 4230.5 True False 3529.351535423187 3454.084080942124 3039.169083682942 3548.62362795483 3051.2544890855943 3315.135788155036 2952.799615008894 3446.9524952997403 2856.541396509177 2990.5778468216236 3179.950094139773 1.1098763914337257 1.0862070091312261 0.9557285472132813 1.115936893001709 0.9595290488076063 1.0425118917005625 0.9285679106884454 1.0839643369410161 0.8982975556042231 0.9404480442422234 1.0 11.634788408818878 -5.529430109620402 0.3990317302788433 0.9580494252723954 1.1829370589148847 0.29933881259433615 0.06337785940386473 3.883567381175639 0.47479589075868794 0.016436377350614585 0.399057890952273 2.955084407653647e-06 5.529430109620402 0.2248876336424892 LDS(ph)SPVSSPR ddPTM_A549_PD325901_60min_R1 1 LDSSPVSSPR 10 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 LDS(0.729)S(0.271)PVSSPR 118.31 6.6971e-05 55312000.0 4764.1 4874.3 4109.0 4744.2 5070.3 3447.5 3798.9 4315.0 4403.4 5356.8 5119.3 True False 5247.747924854943 5285.074367357336 4387.861449424261 5037.238459140055 4714.179619585419 3419.4247030149822 3943.469218337843 4228.933939947984 4218.340411235987 5018.570733802792 4489.658553916456 1.1688523440779666 1.1771662151784386 0.9773263148478419 1.1219647103777923 1.0500084946266361 0.7616224400922696 0.8783450168828191 0.9419277410882316 0.9395682011399751 1.1178067716140576 1.0 12.132390014416346 -7.011652063868851 24.579155422855166 0.9457963368204667 1.1038996830747687 0.42501016143069204 0.09389698559304631 324.9412601842005 685441.4871371887 0.012280466146571486 0.02208378900268234 9.735268549547789e-08 7.011652063868851 0.158103346254302 LDSDAGFHS(ph)LPR ddPTM_A549_MK2206_60min_R1 2 LDSDAGFHSLPR 12 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 LDSDAGFHS(1)LPR;LDS(0.001)DAGFHS(0.999)LPR 95.57 7.9546e-05 7994500.0 1232.01 1908.0 1318.58 1325.73 2070.76 1609.5100000000002 1204.03 1387.98 2422.32 2288.15 2365.37 True False 1439.9431682474162 2005.1090502730829 1505.5744713388633 1650.5339095142808 1766.1539471191845 1779.8272798937292 1422.7866657832408 1584.7304155104787 1873.6683876501781 1771.255325810808 1777.9833481090645 0.8098743836824098 1.1277434360707443 0.8467877232596606 0.9283179796198149 0.9933467312826856 1.0010370917065257 0.8002249668403332 0.8913077938530101 1.0538166117488543 0.9962159250223508 1.0 10.79602609718018 -8.765110852520118 24.999137344346746 1.02541340258161 0.9297792735521367 0.16629578432310232 0.09052608178193247 109.83032170382864 747834.8816702479 0.0147725058268501 0.016025865628546857 1.717469951533599e-09 8.765110852520118 -0.09563412902947321 LDSDAGFHS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 LDSDAGFHSLPR 12 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 LDS(0.001)DAGFHS(0.999)LPR;LDSDAGFHS(1)LPR 112.96 1.2815999999999999e-05 15861200.0 1659.3 1801.4900000000002 1548.42 2229.02 1934.77 2151.44 1283.88 2138.26 1672.15 1596.3400000000001 1716.4 True False 1827.7509144879007 1953.307884629705 1653.5050926058695 2366.701502928283 1798.8784297941513 2133.9193859476577 1332.7387559660933 2095.610726867481 1601.8753505582629 1495.5468199669115 1505.293681156058 1.2142154965296852 1.2976257783328862 1.0984601299435377 1.572252333584944 1.1950348641685797 1.4176100070444846 0.8853679336131649 1.3921607146175372 1.064161346460998 0.9935249437959103 1.0 10.555829267337298 -8.67631323419911 0.6840036456677209 1.0084422605837648 1.2864814414654444 0.26842059693385867 0.17156112066183796 0.5279499677820076 0.5207465501545022 0.04329093188336117 0.04600366144756533 2.1071078535808123e-09 8.67631323419911 0.27803918088167956 LDSEDKDKEGKPLLK ddPTM_A549_MK2206_60min_R1 1 LDSEDKDKEGKPLLK 15 3 P13639 P13639 EEF2 Elongation factor 2 0 58.885 0.0021781999999999995 6858900.0 3760.8 4094.3 3911.9 3099.6 5478.7 5049.0 4525.6 4213.6 6411.0 5978.5 5033.5 False True 4395.531097267786 4302.682381830761 4466.666242799454 3859.0021391463315 4672.790487590002 5583.281828745049 5347.842939684749 4810.890703608805 4958.918736263291 4627.952697751423 3783.5430324672134 1.1617499945286736 1.1372098440294525 1.1805511935427315 1.0199440328896991 1.2350303531615758 1.475675519171839 1.413448424874256 1.271530589800552 1.310654773504618 1.2231796118183909 1.0 11.885522138507463 -4.298218821826629 16.43100751819834 1.1913322902317325 1.1724187116475813 0.0 0.14260007888072512 0.0 0.0 0.022649970705990338 0.0 5.032469809488924e-05 4.298218821826629 -0.018913578584151214 LDSEDKDKEGKPLLK ddPTM_A549_PD325901_60min_R1 2 LDSEDKDKEGKPLLK 15 3 P13639 P13639 EEF2 Elongation factor 2 0 ; 75.961 0.00018246 27601000.0 9491.1 9467.1 10209.5 9174.900000000001 12281.5 9914.9 9889.5 9489.5 10970.8 11804.6 11037.599999999999 False True 10454.629485021464 10264.925741790334 10902.378064710887 9741.612735290268 11418.889808874888 9834.156341674621 10265.850334242043 9300.224478131258 10509.735427984675 11059.255541414357 9680.045173111226 1.0800186670679846 1.0604212643866333 1.1262734697762569 1.0063602556680273 1.1796318720282157 1.0159205009695076 1.060516779690041 0.9607625080061594 1.0857114032048243 1.1424797450464628 1.0 13.240798064690003 LDSQEPGRQT(ph)PDR ddPTM_A549_MK2206_60min_R1 7 LDSQEPGRQTPDR 13 1 Q8TB03-2;Q8TB03 Q8TB03-2 CXorf38 Uncharacterized protein CXorf38 1 LDSQEPGRQT(1)PDR;LDSQEPGRQT(1)PDR;LDSQEPGRQT(1)PDR;LDSQEPGRQT(1)PDR;LDSQEPGRQT(1)PDR;LDS(0.004)QEPGRQT(0.996)PDR;LDSQEPGRQT(1)PDR 148.66 4.3687e-12 368040800.0 9802.449999999999 9416.619999999999 9056.849999999999 7189.269999999999 12102.77 8482.199999999999 8921.14 9174.97 13031.860000000002 14350.519999999997 13929.529999999999 True False 11456.863913106943 9895.885736364002 10341.2475168328 8950.641472738593 10322.468565442468 9379.780773971333 10541.99566089341 10475.5500946672 10080.164517604142 11108.727565131008 10470.443265529557 1.094210017910593 0.9451257683562363 0.9876609093406684 0.8548483808900045 0.985867389151112 0.8958341625183276 1.0068337503531886 1.000487737625632 0.9627256709168869 1.0609605805040547 1.0 13.354034899511062 LDSQEPGRQT(ph)PDR ddPTM_A549_PD325901_60min_R1 8 LDSQEPGRQTPDR 13 1 Q8TB03-2;Q8TB03 Q8TB03-2 CXorf38 Uncharacterized protein CXorf38 1 LDSQEPGRQT(1)PDR;LDS(0.019)QEPGRQT(0.981)PDR;LDS(0.001)QEPGRQT(0.999)PDR;LDS(0.001)QEPGRQT(0.999)PDR;LDSQEPGRQT(1)PDR;LDSQEPGRQT(1)PDR;LDSQEPGRQT(1)PDR;LDSQEPGRQT(1)PDR 209.84 9.480399999999998e-37 527539500.0 29012.120000000003 27007.12 25939.839999999997 26909.52 30383.43 29706.39 26481.62 29005.52 27798.52 29367.75 31618.59 True False 31957.409064806077 29283.104783895873 27700.27353132963 28571.659934445954 28249.40269394321 29464.471008962217 27489.3925403985 28426.98214920977 26630.244876357294 27513.46525306842 27729.703876756084 1.1524612454153824 1.0560193831872073 0.9989386707641287 1.0303629660609404 1.0187415927518344 1.0625598866802277 0.9913337936306266 1.0251455361929835 0.9603508567821241 0.9922019137078156 1.0 14.759144589586539 -2.0000000000000004 0.47145461138614914 0.9889287905738534 4.889459012876433 0.6660966216430337 0.028289384979435412 36.213441959964804 0.36852142303662827 0.006061828489689177 138.89919136264862 0.00999999999999999 2.0000000000000004 3.9005302223025793 LDSQEPGRQT(ph)PDRK ddPTM_A549_PD325901_60min_R1 2 LDSQEPGRQTPDRK 14 2 Q8TB03-2;Q8TB03 Q8TB03-2 CXorf38 Uncharacterized protein CXorf38 1 LDSQEPGRQT(1)PDRK;LDSQEPGRQT(1)PDRK 88.565 2.6234e-05 33037000.0 5515.9 5481.200000000001 4994.1 5620.299999999999 5944.4 5192.3 5088.0 5528.4 5795.0 6111.0 6165.2 True False 6075.870107409039 5943.119960273077 5333.029657962938 5967.453166372585 5526.885851066717 5150.015630301578 5281.62662426043 5418.131725054098 5551.45630265534 5725.150417090217 5406.9194844228205 1.1237212103700538 1.0991693102505105 0.9863342099558247 1.1036696928009833 1.0221875629902601 0.952486095851552 0.976827311646982 1.002073683668414 1.0267318236657539 1.0588562366397745 1.0 12.400591157766153 -4.972856787383262 0.6975868009838069 1.0070244988578865 1.2552981262435725 0.4498676152298954 0.04017806661349998 2.4510353157811258 0.6307195603702459 0.0060287505486288084 0.525601624290834 1.0644939870778881e-05 4.972856787383262 0.24827362738568604 LDSQPQET(ph)SPELPR ddPTM_A549_PD325901_60min_R1 1 LDSQPQETSPELPR 14 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDS(0.008)QPQET(0.496)S(0.496)PELPR 58.885 0.0098005 3414100.0 3373.3 3202.8 4317.3 3771.7 3977.7 3788.0 3500.2 3647.5 4490.3 4071.6 4580.5 True False 3715.7549327077904 3472.711196227576 4610.29794003392 4004.669342847802 3698.320074320045 3757.1517839073967 3633.4020263829307 3574.747751091604 4301.588306438875 3814.518481136396 4017.127538181846 0.9249780838149697 0.8644762117259853 1.1476603359525257 0.9968987304446693 0.9206379531564255 0.9352831714195178 0.9044776377768206 0.8898765889592684 1.0708119833272152 0.9495636981600164 1.0 11.971948550322686 -8.771590482635588 24.996202889813308 1.0334389914611284 0.9507433366378276 0.07536790663647197 0.07719697736339699 247.86326313966646 610340.1036036045 0.013292183546954923 0.014230407445351496 1.6920356822827528e-09 8.771590482635588 -0.08269565482330077 LDSQPQET(ph)SPELPRR ddPTM_A549_MK2206_60min_R1 1 LDSQPQETSPELPRR 15 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDS(0.021)QPQET(0.538)S(0.44)PELPRR 45.257 0.028049 7619800.0 905.02 1412.1 871.68 758.98 1202.2 928.02 836.13 922.04 1509.5 1416.6 1551.5 True False 1057.7652503853672 1483.9698584332389 995.2973313539272 944.9301340719072 1025.35797254471 1026.2224604301803 988.0439979579745 1052.7419936290728 1167.600660176172 1096.589076128571 1166.2197307783617 0.9070033909299325 1.2724616290300657 0.8534389404384738 0.8102505120893806 0.879215078843129 0.8799563524321921 0.8472194149026542 0.9026960922076397 1.0011841073867689 0.9402937089708492 1.0 10.187623921089465 -8.76908166417165 23.827697037822364 1.000559176281107 0.9199755381077772 0.04380999111447803 0.11807895582959231 185.7826078637119 579245.3587873006 0.02064483654366147 0.022196296794807967 1.701838466805614e-09 8.76908166417165 -0.08058363817332981 LDSQPQETS(ph)PELPR ddPTM_A549_MK2206_60min_R1 2 LDSQPQETSPELPR 14 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDSQPQET(0.107)S(0.893)PELPR;LDSQPQET(0.096)S(0.904)PELPR 191.89 1.1615000000000001e-26 466000000.0 7077.0 7873.8 7084.9 6708.799999999999 10218.400000000001 7831.5 7452.700000000001 7953.200000000001 10605.8 9656.0 10794.3 True False 8271.424583961953 8274.542788281025 8089.645354842871 8352.456301169477 8715.286896232627 8660.224131871033 8806.759120688648 9080.590455653495 8203.603233982407 7474.7028936167535 8113.777402475582 1.019429566978048 1.0198138767963234 0.9970257937289051 1.0294164957768095 1.0741343352078552 1.0673480060259881 1.0854080268459956 1.1191569604661487 1.0110707783873167 0.9212358834660855 1.0 12.986158008114614 -4.376929733863044 16.246928146035483 1.0268643631065142 1.0362167786440364 0.0 0.05130036849666815 0.0 0.0 0.006119584687906138 0.0 4.198269038694685e-05 4.376929733863044 0.009352415537522196 LDSQPQETS(ph)PELPR ddPTM_A549_PD325901_60min_R1 2 LDSQPQETSPELPR 14 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDSQPQET(0.049)S(0.951)PELPR;LDSQPQET(0.004)S(0.996)PELPR 203.76 1.1190999999999998e-31 649380000.0 27939.0 33241.0 36730.0 37465.0 33436.0 38786.0 30595.0 36690.0 34202.0 36389.0 45327.0 True False 30775.346712395283 36042.33572929962 39222.718675432734 39779.12796081154 31087.570707938015 38470.13967545729 31759.309467226405 35958.1891672518 32764.60888065884 34091.392329814415 39752.06635152682 0.7741823139519198 0.9066782946722288 0.9866837695577113 1.0006807598137268 0.7820365973690822 0.9677519486727189 0.7989348072218283 0.904561510067783 0.8242240438754048 0.8576005088224807 1.0 15.278742234603511 -10.997523971409034 1.281168039556627 0.9998654876453669 0.8811446121931974 0.0 0.08742127961665591 0.5222454548025848 1.5285400565833436 0.053612586114902924 0.012295799518709745 1.005717549673522e-11 10.997523971409034 -0.11872087545216947 LDSQPQETS(ph)PELPRR ddPTM_A549_MK2206_60min_R1 1 LDSQPQETSPELPRR 15 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDS(0.001)QPQET(0.173)S(0.826)PELPRR 65.47 0.0015566 8197600.0 909.01 1290.6 835.71 931.63 1357.4 945.72 938.85 1155.1 1511.0 1558.7 1537.5 True False 1062.4286648392335 1356.2860274016987 954.2262444770905 1159.8793918224603 1157.7282581369066 1045.7954626818707 1109.4268923287577 1318.8389623453884 1168.760912571179 1206.5885874358362 1155.6963171587054 0.9192974391847405 1.1735661066534726 0.8256721340283132 1.0036195275537774 1.0017581962908706 0.9049050751091539 0.9599640284882955 1.141163939665198 1.0113045228391773 1.0440360235829513 1.0 10.17454663467471 LDSQPQETS(ph)PELPRR ddPTM_A549_PD325901_60min_R1 2 LDSQPQETSPELPRR 15 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDSQPQET(0.186)S(0.814)PELPRR;LDS(0.001)QPQET(0.244)S(0.755)PELPRR 122.14 1.8305e-07 21319000.0 4048.0 4119.7 4074.3 4188.6 4375.1 4008.7 3899.7 4483.7 3770.9 5201.0 4912.799999999999 True False 4458.949980019903 4466.881577088408 4350.80649875621 4447.320308999207 4067.808069275616 3976.054476280248 4048.1052174977185 4394.269086105393 3612.4221866579874 4872.607972391789 4308.556744805106 1.034905710687489 1.0367466048751004 1.0098060107951567 1.0322065072860906 0.9441231275833226 0.9228274598156886 0.9395501689466158 1.0198935157123397 0.8384297574851581 1.13091419261607 1.0 12.07298896933348 -6.802836890869945 4.844761930288907 0.9313602425684705 1.028076458944879 0.0 0.07488175100635017 0.1715564929267378 9.068750089657103 0.00895997351170678 0.017656458091180254 1.5745741204067094e-07 6.802836890869945 0.09671621637640848 LDSS(ph)ACLHAVGDK ddPTM_A549_PD325901_60min_R1 1 LDSSACLHAVGDK 13 0 E5RJP4;O94808 E5RJP4 GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 1 LDS(0.457)S(0.543)ACLHAVGDK 50.827 0.0084401 3556400.0 1944.5 1824.4 1905.7 1772.5 1945.0 1723.9 1827.9 1892.7 2121.3 2032.1 1645.1 True False 2141.904208534758 1978.1485907323563 2035.032261905041 1881.9832993604275 1808.389909885735 1709.8611299572237 1897.4617347652602 1854.9486137055744 2032.1491380194618 1903.7928591996438 1442.7631291481182 1.4845847979213667 1.371083409859772 1.410510305393394 1.3044298550044369 1.2534212119445427 1.185129488973574 1.3151581825393746 1.2856917232150449 1.4085119705126838 1.319546376489217 1.0 10.494618744259471 -10.843692895536078 0.9150870604617058 0.9843986494014018 1.3342840981142472 0.03782568194120128 0.1216483932355612 0.3004104660693346 0.41279715762913316 0.07422137393445866 0.01520487627631788 1.4332010064206642e-11 10.843692895536078 0.34988544871284544 LDSS(ph)GER ddPTM_A549_MK2206_60min_R1 2 LDSSGER 7 0 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 LDS(0.232)S(0.768)GER;LDS(0.248)S(0.752)GER 99.13600000000001 0.011426 77341000.0 5771.5 5568.7 5328.0 3751.3 3490.9 2142.83 2328.8 2237.6099999999997 3475.0 7434.1 8042.9 True False 6745.588100372534 5852.123044159181 6083.590516535563 4670.368668402259 2977.393234367266 2369.5828483045652 2751.9128155245376 2554.798069893228 2687.918048434711 5754.731646793318 6045.6259572525205 1.1157799288393484 0.9679929068616613 1.006279673858668 0.7725202818410457 0.49248717261369646 0.39194995936887894 0.4551907172198203 0.42258619503715955 0.4446054167823931 0.9518835084214503 1.0 12.561676006877796 -6.3607127655878415 3.215804565944802 0.6450734417696117 1.029036362911139 0.460163556240482 0.20156827568775107 0.2531672177327616 4.966833883041089 0.03727591996979005 0.0955185759482922 4.358000085313944e-07 6.3607127655878415 0.3839629211415273 LDSS(ph)IISEGK ddPTM_A549_MK2206_60min_R1 2 LDSSIISEGK 10 0 G5EA36;P30260;P30260-2;I3L328 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LDS(0.182)S(0.818)IISEGK;LDS(0.113)S(0.887)IISEGK 192.5 1.8048999999999998e-51 3831300.0 2192.9 2234.0 2085.1 2041.7 2711.9 3112.4 2320.3 2633.2 3473.9 3176.8 2861.4 True False 2563.0079087424288 2347.701057814501 2380.798533413723 2541.9165916553943 2312.983102432208 3441.7521021560883 2741.8684755503214 3006.464163836793 2687.0671966783725 2459.1586736165777 2150.8354093775083 1.1916336775784302 1.091529852809132 1.1069180482307432 1.1818275729387737 1.0753882386107956 1.6001931561802747 1.274792326551788 1.3978122876017367 1.2493132598444898 1.1433504687968215 1.0 11.070681412788897 -10.530595439964195 0.9763919181654601 1.0083821212930468 1.2397812361569844 0.13878952357907026 0.14956495525765567 0.567452692873863 1.0151449478511763 0.08369157161884196 0.027241866541957042 2.947165740304805e-11 10.530595439964195 0.2313991148639376 LDSS(ph)IISEGK ddPTM_A549_PD325901_60min_R1 1 LDSSIISEGK 10 0 G5EA36;P30260;P30260-2;I3L328 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LDS(0.328)S(0.672)IISEGK 119.03 9.7038e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LDSS(ph)PSVSSTLAAK ddPTM_A549_MK2206_60min_R1 2 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.005)S(0.995)PSVSSTLAAK;LDS(0.27)S(0.729)PS(0.001)VSSTLAAK 290.64 1.7027999999999997e-116 132296000.0 23288.0 25011.0 21660.0 20955.2 30864.0 25593.0 24856.0 26249.0 32599.0 31729.0 31009.0 True False 27218.44506306428 26283.953069381616 24731.71369897906 26089.224940714677 26323.94648529357 28301.23427274155 29372.01345872462 29969.87613419108 25215.378549905952 24561.396863252463 23308.60949513775 1.1677421198695759 1.1276499816458176 1.061054873485189 1.119295638212866 1.129365803257583 1.2141965945521236 1.2601358079662246 1.2857856724762107 1.0818053541617727 1.0537478380413918 1.0 14.508575320768465 -9.079752491346088 3.2023657342622904 1.0317238614470732 1.1673715785765433 0.43338590381437525 0.06386129272797421 0.16389108643297368 3.5020813744414165 0.013719231379992852 0.013519126803556401 8.322379364775079e-10 9.079752491346088 0.1356477171294701 LDSS(ph)PSVSSTLAAK ddPTM_A549_PD325901_60min_R1 2 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.276)S(0.724)PSVSSTLAAK;LDS(0.046)S(0.951)PS(0.003)VSSTLAAK 301.95 1.730599999999999e-135 122809700.0 30250.2 31185.5 28071.9 28471.0 35692.2 28724.3 28698.5 28702.1 32823.4 29935.5 34204.6 True False 33321.17803497977 33813.611530521746 29977.027944047935 30229.589007667568 33185.30300340545 28490.3788243113 29790.63712192179 28129.614099138136 31443.9466444482 28045.367421175622 29997.65104082409 1.1107929080724575 1.1272086432535828 0.999312509611233 1.0077318709564236 1.1062633856978754 0.9497536585627478 0.9930989956973441 0.9377272260703439 1.0482136285156405 0.9349187835743676 1.0 14.872561914789548 -5.75926804231535 24.993727734960228 1.014068054278778 1.1190008130784606 0.44617557299080135 0.049474509644916016 35.45830624220499 408122.9595590143 0.005981956828658253 0.02110503826570583 1.7407321788696595e-06 5.75926804231535 0.10493275879968245 LDSS(ph)PSVSSTLAAKDDPDGK ddPTM_A549_MK2206_60min_R1 1 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.426)S(0.546)PS(0.019)VS(0.006)S(0.002)T(0.002)LAAKDDPDGK 106.11 3.0796e-10 8458700.0 2738.5 3464.6 2901.3 2523.7 4039.5 3140.3 3225.4 3353.2 3744.2 3996.8 4210.6 True False 3200.691850103125 3640.9333414969224 3312.7479665211417 3142.0066132931997 3445.2949010932944 3472.6044616375652 3811.4134297461565 3828.5263687443166 2896.1446782587745 3093.920104101847 3164.9918133518327 1.0112796616410469 1.1503768591556172 1.0466845293393763 0.992737674719515 1.088563605933821 1.0971922413789628 1.2042411653854301 1.2096481111241102 0.9150559777251557 0.977544425565285 1.0 11.627986052608914 -8.779112264085454 24.99952768030968 0.9598875387382505 1.099398935582248 0.4375266459057571 0.06856909574055055 167.00648287777784 236241.43321610006 0.012932931837192307 0.01378252327383678 1.662982717746869e-09 8.779112264085454 0.1395113968439975 LDSS(ph)PSVSSTLAAKDDPDGK ddPTM_A549_PD325901_60min_R1 1 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.064)S(0.925)PS(0.01)VSSTLAAKDDPDGK 215.6 3.2048e-67 35046000.0 8050.6 7865.1 8008.7 8152.4 10207.0 8050.7 8042.8 8423.8 11433.0 8450.5 9026.6 True False 8867.890985461518 8527.919579570847 8552.218542225379 8655.955232556247 9490.095532238405 7985.137768401073 8348.873155189036 8255.780700656742 10952.510769328474 7916.933987828644 7916.385424331899 1.1201944460921596 1.0772491639125261 1.080318615606963 1.0934226630693342 1.1987914968199416 1.0086848151503407 1.0546319699806224 1.042872505333264 1.3835241947246153 1.0000692946928857 1.0 12.950626139118745 LDSS(ph)PVS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 LDSSPVSSPR 10 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 LDS(0.488)S(0.512)PVS(0.725)S(0.275)PR 101.79 0.00047891 11834000.0 739.16 618.11 725.65 503.43 816.99 766.6 599.71 818.91 1030.7 1036.9 1108.1 True False 863.912137273042 649.5691588387297 828.5580815172739 626.7703725998313 696.811853260109 847.7211031721043 708.6695442280234 934.9930003066938 797.2480956896852 802.6635698416745 832.9281879958118 1.0371988242489232 0.7798621396182067 0.9947533214249199 0.7524902886381639 0.836580948156857 1.017760132733516 0.8508170985703113 1.1225373492959458 0.9571630630102941 0.9636647929673747 1.0 9.702048306868168 -7.26219218242904 24.99973371784381 0.9828256947127827 0.8738756831835384 0.22053558825245834 0.09804285356314092 73.08460341019804 2427065.940025912 0.013133554186779584 0.021765254875245377 5.4677395291202665e-08 7.26219218242904 -0.10895001152924433 LDSS(ph)PVS(ph)SPRK ddPTM_A549_PD325901_60min_R1 2 LDSSPVSSPRK 11 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 LDS(0.463)S(0.538)PVS(0.537)S(0.462)PRK;LDS(0.409)S(0.591)PVS(0.634)S(0.366)PRK 62.042 0.0018529 22120900.0 4890.4 5040.7 5350.9 5838.5 6100.7 6137.299999999999 5418.6 5640.0 6031.0 5490.5 6209.4 True False 5386.869807877801 5465.497479338191 5714.044251575636 6199.130884804437 5672.207878272442 6087.319863615327 5624.807788171694 5527.505775505591 5777.538043367453 5143.82889298541 5445.683164629704 0.9892000039345105 1.0036385360861944 1.0492795997918067 1.1383568778052415 1.0415971158796091 1.1178248310796197 1.0328929572519796 1.0150252242744002 1.0609390720512684 0.9445699901153137 1.0 12.410897332024621 -10.902920216025011 0.7040272143322708 0.992300039036234 1.0526129592185347 0.26014496688495925 0.04591478198598425 1.5535579539684643 1.0656991084305911 0.058530007508202295 0.008502207640972372 1.250488735642216e-11 10.902920216025011 0.06031292018230072 LDSS(ph)PVSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LDSSPVSSPR 10 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 LDS(0.306)S(0.694)PVS(0.381)S(0.619)PR 109.16 0.00025432 14570000.0 1068.0 845.49 1307.6 1106.1 1068.5 966.24 1020.2 952.65 1413.2 1279.5 963.31 True False 1176.422573779955 916.7424095474131 1396.3415992375674 1174.4212848646378 993.4522461248882 958.3712617958514 1059.0242692748611 933.6486484105322 1353.8081185353808 1198.7121516391644 844.8289769252171 1.392497897102895 1.085121882163568 1.652809784436607 1.3901290284087824 1.1759211310916327 1.1343967690169379 1.2535368674606957 1.1051333156310255 1.6024641146455583 1.4188814356272634 1.0 9.722515508549414 -11.155580524147817 1.550895446572744 1.0004989198702556 1.343018593338886 0.0 0.22007165450585076 0.4167336723097826 1.8020275782071447 0.1443664538195907 0.030921959842598778 6.989071377875916e-12 11.155580524147817 0.34251967346863044 LDSSEMDHS(ph)ENEDYTMSSPLPGK ddPTM_A549_MK2206_60min_R1 3 LDSSEMDHSENEDYTMSSPLPGK 23 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LDS(0.009)S(0.009)EMDHS(0.98)ENEDY(0.002)TMSSPLPGK;LDSSEMDHS(0.999)ENEDYTMSSPLPGK;LDSSEMDHS(1)ENEDYTMSSPLPGK 142.94 1.4785e-27 12556000.0 3696.72 4280.3 4335.6 3914.1000000000004 5826.0 4361.1 4044.7 4145.5 7289.6 7233.2 6692.1 True False 4320.63595987337 4498.148987360522 4950.453273928603 4873.054675710624 4969.003117655529 4822.588707336111 4779.569634555175 4733.137320061302 5638.517239099187 5599.215096324425 5030.266877435945 0.8589277796083271 0.8942167676108157 0.9841333262325785 0.968746747328552 0.9878209722718243 0.9587142839217124 0.9501622381100072 0.9409316514184436 1.1209181096119658 1.1131049768831522 1.0 12.296419227941323 -8.740950113208095 24.990421732278403 1.0571002173394524 0.9458251637762228 0.6091451524108342 0.04733798223546655 156.77752023037561 191218.84312724907 0.009488617410764013 0.010753150599911101 1.8157242204635518e-09 8.740950113208095 -0.11127505356322953 LDSSEMDHS(ph)ENEDYTMSSPLPGK ddPTM_A549_PD325901_60min_R1 2 LDSSEMDHSENEDYTMSSPLPGK 23 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LDS(0.001)S(0.001)EMDHS(0.998)ENEDYTMSSPLPGK;LDS(0.093)S(0.087)EMDHS(0.773)ENEDY(0.019)T(0.021)MS(0.005)S(0.001)PLPGK 115.63 8.458000000000001e-16 6807600.0 1917.2 2396.6 1721.2 1962.1 2214.5 2129.3 2429.2 2110.9 2046.1 2224.4 1776.9 True False 2111.8327326319554 2598.56989286843 1838.010982416414 2083.2944607475847 2058.9611596102623 2111.959686767166 2521.6445353092445 2068.7964435309855 1960.1095325044178 2083.9510043815226 1558.3525646971561 1.3551700561691316 1.667510903332344 1.1794577325148532 1.3368569526193474 1.32124219271933 1.3552515230580031 1.6181476467100309 1.3275535269729073 1.2578087763376815 1.3372782588428627 1.0 10.605805953105067 -9.720439972697832 0.6564247011188026 1.0161182063590313 1.40190065537953 0.12968224256555883 0.16249298935445522 0.36710852277056194 0.3364431665852754 0.0627242798711508 0.031310852108751376 1.903531321631744e-10 9.720439972697832 0.38578244902049863 LDSSEMDHS(ph)ENEDYTMSSPLPGKK ddPTM_A549_MK2206_60min_R1 2 LDSSEMDHSENEDYTMSSPLPGKK 24 1 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LDS(0.003)S(0.003)EMDHS(0.994)ENEDYTMSSPLPGKK;LDS(0.059)S(0.059)EMDHS(0.882)ENEDYTMSSPLPGKK 76.237 1.2242e-05 7292600.0 2720.1 3770.2 4334.3 3320.4 4684.1 3895.3999999999996 3339.1000000000004 3808.8 5327.6 5408.5 6438.4 True False 3179.186379939935 3962.087076173782 4948.968914380654 4133.898149058423 3995.075094989748 4307.608642442754 3945.7712479895163 4348.7090639608 4120.907106429 4186.716093633615 4839.567589199744 0.6569153795960592 0.8186861745697698 1.0226055991913525 0.8541875018511708 0.8255024899136414 0.890081306448919 0.8153148344895781 0.8985738878129583 0.8515031623125694 0.8651012753653715 1.0 12.24066243447891 -14.99999999999668 0.20418973392415032 1.7156530854170517 0.8278066827308435 0.050509220559571744 0.09034849206370965 41.71040103340332 0.49586378401602227 11.929996990614901 0.06601847083504488 1.0000000000076445e-15 14.99999999999668 -0.8878464026862083 LDSSEMDHS(ph)ENEDYTMSSPLPGKK ddPTM_A549_PD325901_60min_R1 5 LDSSEMDHSENEDYTMSSPLPGKK 24 1 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LDS(0.003)S(0.003)EMDHS(0.993)ENEDYTMSSPLPGKK;LDS(0.011)S(0.01)EMDHS(0.976)ENEDY(0.001)T(0.001)MSSPLPGKK;LDS(0.002)S(0.002)EMDHS(0.971)ENEDY(0.011)T(0.012)MS(0.002)SPLPGKK;LDS(0.118)S(0.107)EMDHS(0.771)ENEDY(0.002)T(0.002)MSSPLPGKK;LDS(0.006)S(0.006)EMDHS(0.975)ENEDY(0.004)T(0.007)MS(0.001)SPLPGKK 85.48899999999999 1.6449000000000001e-06 79086600.0 7930.62 7756.0199999999995 7673.65 8217.15 9924.300000000001 9789.500000000002 7654.82 8271.5 8351.939999999999 8781.43 9089.01 True False 8735.73070418613 8409.647025154556 8194.430034406052 8724.704692998335 9227.251404976347 9709.77755769838 7946.128363978234 8106.518443633782 8000.937006453709 8226.969011151778 7971.119389981484 1.0959227025461002 1.0550145611573998 1.0280149667191332 1.0945394575276335 1.1575853971744088 1.2181196997127068 0.9968648034509858 1.0169862031953096 1.003740706293987 1.0320970755364496 1.0 12.960566621798327 LDSSPS(ph)VSSTLAAKDDPDGKQEAKPQQAAGMLSPK ddPTM_A549_MK2206_60min_R1 1 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK 35 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.149)S(0.149)PS(0.175)VS(0.175)S(0.175)T(0.175)LAAKDDPDGKQEAKPQQAAGMLSPK 55.336000000000006 0.00072981 31857000.0 1158.0 1492.2 1662.8 1009.1 1767.2 1239.9 1427.4 1039.7 1938.8 1693.0 2143.2 True False 1353.442089618191 1568.1466062984782 1898.6100433362128 1256.329545300221 1507.2472209956836 1371.1053950209919 1686.740103435127 1187.0806589477115 1499.664895627401 1310.5501241604347 1610.98429068913 0.8401336359644015 0.9734089993066741 1.1785403832361676 0.7798521391929909 0.9356064051691834 0.8510979299707975 1.0470245508809966 0.7368666881536844 0.9308997637623704 0.8135089409219636 1.0 10.653726710515762 -10.25249973961461 1.1390981297076952 0.9926862730611141 0.9233382255047271 0.0 0.12889926931758217 1.0497612162326526 2.705431061817815 0.04263738643128388 0.020207320485782363 5.591138627924977e-11 10.25249973961461 -0.06934804755638702 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK 35 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLS(1)PK;LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLS(1)PK 127.39 7.0173e-30 65176000.0 3191.8 3185.3 3760.1 3782.3 5274.5 3632.6000000000004 3351.8999999999996 3355.0 6239.6 6284.0 6562.2 True False 3730.4978079821603 3347.418164483678 4293.3387201999585 4708.963669793901 4498.628037087898 4016.9993208752753 3960.89684230363 3830.5815242565864 4826.340562593737 4864.440035572456 4932.624632493563 0.7562906334707862 0.6786281977413465 0.8703963994984898 0.9546568045688497 0.9120150776228295 0.8143736084058323 0.8029998504672956 0.7765807880499784 0.9784528364068731 0.9861768121433886 1.0 12.268139788608142 -2.0000000011258745 0.08913689450836967 1.136804799822461 0.052803649660949706 0.42352237669529835 0.07824222537040641 86.04140147771135 0.5357778474111774 0.8449347380700426 11.438395879438062 0.00999999997407578 2.0000000011258745 -1.0840011501615114 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK 35 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLS(1)PK;LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLS(1)PK 78.78399999999999 4.9423e-06 19373300.0 1365.5900000000001 1968.12 1895.67 1738.91 1963.26 2217.7 2182.5299999999997 1602.04 2117.4 2382.08 2065.05 True False 1504.2236915057754 2133.9803795177395 2024.3215657897515 1846.318521348854 1825.3673904793154 2199.6397864760916 2265.5873734762413 1570.086055423932 2028.4130414568453 2231.675062271685 1811.0619414305036 0.8305755077143492 1.1783033648380752 1.117753909725915 1.0194673517850539 1.0078989286459812 1.214558009395671 1.2509717760877475 0.8669422174394368 1.120013068053687 1.232246678713237 1.0 10.822620174443497 -3.9441984212147867 12.958692463330605 1.0628731049261795 0.6355683826048693 0.0 0.13747336402746102 0.0 0.0 0.015598565476601028 0.0 0.00011371076434161084 3.9441984212147867 -0.4273047223213102 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK ddPTM_A549_MK2206_60min_R1 1 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK 35 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 0 46.772 0.0015122 4763000.0 1038.7 1614.0 1354.4 1247.1 1497.1 884.34 1570.7 949.76 1656.2 1715.0 1704.4 False True 1214.0071662231562 1696.145706048616 1546.4742859601683 1552.6395559844464 1276.8785731963771 977.9202718226176 1856.0758585298831 1084.3913885180134 1281.0733444079344 1327.580308880771 1281.1504409530382 0.9475914205048904 1.3239239138745218 1.2070981178523872 1.2119104098574476 0.9966656002135992 0.7633141593388126 1.4487571476376828 0.8464200252012112 0.9999398224106714 1.0362407617743894 1.0 10.323224180851602 -6.765014834379152 24.67667421614719 1.004286123223664 1.185899557240027 0.15059457429257872 0.18056164024210147 93.20112507178108 643253.4052530075 0.023541180653964364 0.04577995601343559 1.717849708840927e-07 6.765014834379152 0.1816134340163631 LDTGPQSLSGKST(ph)PQPPSGK ddPTM_A549_MK2206_60min_R1 1 LDTGPQSLSGKSTPQPPSGK 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LDT(0.014)GPQS(0.047)LS(0.047)GKS(0.189)T(0.694)PQPPS(0.008)GK 41.903999999999996 0.030447000000000002 2599000.0 1050.0 1654.3 1557.9 1680.7 1650.9 1204.8 1299.4 1270.4 1978.2 2278.1 2485.8 True False 1227.2143299646816 1738.496803913397 1778.8336459667341 2092.471575449491 1408.0547969340066 1332.291136318486 1535.4841602939644 1450.4830904368303 1530.1408585362715 1763.4756277908364 1868.5072554101516 0.6567886351050313 0.9304201516369192 0.9520078880166117 1.1198626975575632 0.7535720253999912 0.7130243313002484 0.8217705100411364 0.7762790785195202 0.8189108466696288 0.9437884828569959 1.0 10.867670450373746 -10.709696869943485 1.0028596703533406 0.9986101513147637 0.8436943778698109 0.14568240103945174 0.12207945771125188 0.7606925000138142 1.3783730636572074 0.08171421664473165 0.022066550702443545 1.951206032725718e-11 10.709696869943485 -0.15491577344495278 LDTGPQSLSGKST(ph)PQPPSGK ddPTM_A549_PD325901_60min_R1 1 LDTGPQSLSGKSTPQPPSGK 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LDT(0.006)GPQS(0.026)LS(0.031)GKS(0.15)T(0.775)PQPPS(0.012)GK 57.147 0.0023296 5507600.0 1508.4 1740.5 1769.2 2062.6 2298.2 1938.1 2036.3 2544.4 2123.1 1569.6 1864.1 True False 1661.5316575746106 1887.178043285282 1889.2685510638605 2190.002117495526 2136.7823603595853 1922.3167561750074 2113.7925108061145 2493.6499459568136 2033.87349027913 1470.4951881303873 1634.8275175034998 1.0163345305759777 1.1543591131663478 1.1556378460945596 1.339592155164979 1.3070384107692332 1.1758529481510835 1.2929758571925856 1.5253290755496933 1.2440905652144896 0.8994803258364161 1.0 10.67492271685713 -10.428593198651125 0.9984496729447653 1.0133547578963475 1.2484262608627208 0.41813836029616536 0.12914946423025914 0.44428017972677697 0.8520714789615255 0.06411393200274616 0.02366123190517488 3.7274068701893666e-11 10.428593198651125 0.23507150296637325 LDTGS(ph)PEPETR ddPTM_A549_MK2206_60min_R1 1 LDTGSPEPETR 11 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LDT(0.005)GS(0.995)PEPETR 130.1 9.6777e-08 57103000.0 890.61 860.75 716.13 727.87 943.25 834.03 845.21 830.02 1325.5 1236.6 1097.6 True False 1040.9231946760435 904.5584984394957 817.6880023661066 906.1981826753254 804.4991745157192 922.2865010156928 998.7737164245513 947.6778768296418 1025.27636638855 957.2512011440008 825.0356277810694 1.2616705989723171 1.0963871958745621 0.9910941719756707 1.098374606091306 0.9751084043236014 1.1178747559013655 1.2105825285518275 1.14865085205886 1.2427055655111858 1.1602543804302425 1.0 9.688312610846195 -7.499367750184058 24.26501189078461 1.1287719291129206 1.077337207604584 0.08575346014355045 0.09061167720573463 1520.5702139987459 1569337.8551857958 0.01681514760403556 0.02677366202108803 3.166884685110979e-08 7.499367750184058 -0.05143472150833661 LDTGS(ph)PEPETR ddPTM_A549_PD325901_60min_R1 2 LDTGSPEPETR 11 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LDT(0.005)GS(0.993)PEPET(0.001)R;LDT(0.002)GS(0.998)PEPETR 170.68 4.4707e-15 146468000.0 4758.4 3867.0 3505.9 5365.9 5048.3 5019.0 4760.5 4679.4 3919.4 4476.3 4847.5 True False 5241.469265051061 4192.885661237682 3743.8314566893437 5697.339456156906 4693.72482368954 4978.126928044148 4941.663432545554 4586.065696081714 3754.6812480806457 4193.665654069863 4251.288230834298 1.23291317371404 0.9862623829706426 0.880634587308288 1.3401442449454495 1.1040711823880303 1.170969046967491 1.162392000783201 1.0787472989526559 0.8831867058197098 0.9864458550830542 1.0 12.053684359470429 -8.625901725549788 5.5587858256805065 0.9451877598932641 1.1197793335960047 0.2826925592382743 0.11670241491535077 0.1878223881833331 8.741132794034655 0.020057325565398406 0.022746294334133877 2.3664551308746783e-09 8.625901725549788 0.1745915737027406 LDTKEEKS(ph)VEYEGDLK ddPTM_A549_MK2206_60min_R1 2 LDTKEEKSVEYEGDLK 16 2 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LDTKEEKS(1)VEYEGDLK;LDT(0.001)KEEKS(0.998)VEYEGDLK 142.31 9.9984e-15 83969000.0 16764.3 19142.6 18095.7 16076.0 24649.7 19093.9 18094.0 17093.5 23931.4 25156.5 25195.5 True False 19593.703992216102 20116.876575344617 20661.942363001624 20014.620721679064 21023.76178326014 21114.403824494955 21381.445587470356 19516.55597164826 18510.976110592943 19473.629178051964 18938.761989575392 1.0345820916383666 1.062206525770676 1.0909869596742774 1.0568072365393189 1.1100916625295998 1.1148777220030073 1.1289779975713041 1.0305085402303966 0.977412151902119 1.0282419298986376 1.0 14.209054405716051 -8.504286382986562 4.886396307707681 0.9897368702199861 1.0857515226061456 0.6218167019012869 0.028809210785191657 0.0754857772329161 4.876366702481918 0.004704541536212654 0.005551206449952352 3.1312202503801387e-09 8.504286382986562 0.09601465238615947 LDTKEEKS(ph)VEYEGDLK ddPTM_A549_PD325901_60min_R1 2 LDTKEEKSVEYEGDLK 16 2 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LDTKEEKS(1)VEYEGDLK;LDT(0.007)KEEKS(0.993)VEYEGDLK 158.89 8.0892e-21 45851000.0 13209.6 14749.1 17178.0 15236.4 19095.0 15717.7 15123.2 17422.4 15694.0 17592.4 17516.5 True False 14550.628867606454 15992.058418970944 18343.802379705518 16177.517823624952 17753.83307417384 15589.700262386836 15698.721651732574 17074.8965643916 15034.435757355128 16481.61286166224 15362.08154624219 0.9471782078364094 1.0410085619473135 1.1940961467030295 1.053081105898844 1.1556918911497842 1.0148169188829963 1.021913703847818 1.1114962847315697 0.9786717842955852 1.0728762773488796 1.0 13.907086092547166 -8.775354423517662 24.86525026779145 0.989928334748816 1.0699485605613226 0.05720532477211038 0.06950520741092737 224.37826399496464 400947.7124036699 0.011000781268022014 0.011740426149610567 1.6774345213262486e-09 8.775354423517662 0.08002022581250656 LDTS(ph)FK ddPTM_A549_MK2206_60min_R1 2 LDTSFK 6 0 K7EQQ7;K7EKK2;K7EN35;E7EV84;Q14457 K7EQQ7 BECN1 Beclin-1 1 LDT(0.107)S(0.893)FK;LDT(0.15)S(0.85)FK 85.212 0.040050999999999996 7641500.0 3333.2 3165.2 3338.8999999999996 2832.7 3528.3999999999996 3118.2 2968.2 3032.4 4425.0 3375.7 3746.7 True False 3895.7626710840723 3326.2951603377173 3812.406226663024 3526.7116271647346 3009.3770340432147 3448.1658543063572 3507.483518996878 3462.2519863355183 3422.744565272978 2613.127025474531 2816.2909863405007 1.383295508162756 1.1810907241016022 1.353697556521629 1.2522539908943704 1.0685604039636583 1.2243641978156943 1.2454265329856826 1.2293658585451717 1.2153376841646983 0.9278611614171439 1.0 11.459580689255914 -14.99999999920497 0.17564992162693333 0.007613892330001533 1.2913563514237405 0.6586076347359113 0.07761798906892843 26.20054923240831 0.2868202648635817 8.906579583808735 0.09030545602421725 1.0000000018306238e-15 14.99999999920497 1.283742459093739 LDVKS(ph)IDDEDVDENEDDVYGNSSGR ddPTM_A549_MK2206_60min_R1 2 LDVKSIDDEDVDENEDDVYGNSSGR 25 1 Q8TEQ0;Q8TEQ0-2;Q8IUI4 Q8TEQ0 SNX29;SNX29P2 Sorting nexin-29;Putative protein SNX29P2 1 LDVKS(1)IDDEDVDENEDDVYGNSSGR;LDVKS(1)IDDEDVDENEDDVYGNSSGR 171.48 2.3649000000000002e-48 26662000.0 3415.6000000000004 3550.8999999999996 3743.5 3378.3999999999996 4301.1 3344.3 4021.8 3680.0 5579.2 5422.1 5254.4 True False 3992.069776597492 3731.6256428798156 4274.384590587632 4206.108151662136 3668.4138876327156 3698.1916062333275 4752.509000977577 4201.651269527343 4315.520108151639 4197.243844188007 3949.5874659373635 1.0107561387174004 0.9448140280631009 1.0822357087800774 1.064948728933616 0.9288093805417431 0.9363488308912861 1.203292506360447 1.063820286489125 1.0926508516067077 1.0627043660601314 1.0 11.947486256451187 LDVKS(ph)IDDEDVDENEDDVYGNSSGR ddPTM_A549_PD325901_60min_R1 2 LDVKSIDDEDVDENEDDVYGNSSGR 25 1 Q8TEQ0;Q8TEQ0-2;Q8IUI4 Q8TEQ0 SNX29;SNX29P2 Sorting nexin-29;Putative protein SNX29P2 1 LDVKS(1)IDDEDVDENEDDVYGNSSGR;LDVKS(1)IDDEDVDENEDDVYGNSSGR 234.25 7.310699999999999e-97 37596000.0 7099.4 6707.9 6941.4 8066.700000000001 9142.8 8746.7 8088.2 8278.7 7662.7 7185.799999999999 9298.5 True False 7820.1258616979485 7273.198274377099 7412.4851460290965 8564.961738195074 8500.641268947707 8675.469775159145 8396.00087703286 8113.574833985485 7340.663366757049 6732.087361663702 8154.843448048011 0.9589547502067397 0.8918869283895391 0.9089671914919949 1.0502913750288156 1.0424039802974352 1.0638425900420876 1.0295722941244905 0.9949393738426207 0.900159937284161 0.8255323850852259 1.0 12.993441465842938 LDVSNVAT(ph)DTERLELKASPNVEAPQPHR ddPTM_A549_PD325901_60min_R1 1 LDVSNVATDTERLELKASPNVEAPQPHR 28 2 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 LDVSNVAT(0.572)DT(0.084)ERLELKAS(0.344)PNVEAPQPHR 105.71 6.3595e-15 5444000.0 479.19 512.79 416.32 648.7 668.45 674.87 286.63 724.97 729.0 667.31 626.7 True False 527.8370160389669 556.0046129366617 444.5739787355339 688.7687256954079 621.5003780273108 669.3740824724351 297.53786149995443 710.5099046220372 698.3626651657881 625.175932716163 549.6198729786189 0.9603674138971693 1.0116166468352776 0.808875371129145 1.2531728919529117 1.1307822161872378 1.2178855157562232 0.5413520800976007 1.2927296474406724 1.2706284825202374 1.1374696648577758 1.0 9.102290359377177 -6.2588927524058295 24.972992623026293 1.1136040918218046 0.9354195040888912 0.13244097296238133 0.20243549947881262 360.70814111983884 3537183.661902116 0.028770320910731496 0.07240492843274351 5.509437333509996e-07 6.2588927524058295 -0.17818458773291346 LDVSNVATDTERLELKAS(ph)PNVEAPQPHR ddPTM_A549_MK2206_60min_R1 1 LDVSNVATDTERLELKASPNVEAPQPHR 28 2 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 LDVS(0.002)NVAT(0.239)DT(0.168)ERLELKAS(0.592)PNVEAPQPHR 57.81100000000001 0.00071427 3236700.0 413.16 235.21 211.18 208.59 568.22 200.64 358.42 200.92 514.09 502.16 700.53 True False 482.891307207817 247.1811843368617 241.1284994898613 259.69455936396116 484.63559071648217 221.871591625947 423.540274536373 229.40102529169383 397.6494358330363 388.72170723473334 526.5690673555689 0.9170521725343616 0.4694183529963243 0.4579237832955308 0.49318232965743286 0.9203647171117043 0.4213532571143737 0.8043394509734368 0.4356522999798418 0.755170518902739 0.738215993557872 1.0 9.040478964323423 -9.730826788280671 0.6749470408587808 0.9854332604939607 0.6048413159174894 0.14450435220856606 0.19633095105171863 0.46298654831187613 0.4474169830767862 0.078572968898978 0.039592933401871595 1.85854555979599e-10 9.730826788280671 -0.3805919445764714 LDVSNVATDTERLELKAS(ph)PNVEAPQPHR ddPTM_A549_PD325901_60min_R1 1 LDVSNVATDTERLELKASPNVEAPQPHR 28 2 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 LDVSNVAT(0.264)DT(0.13)ERLELKAS(0.605)PNVEAPQPHR 134.63 6.9224e-28 7527000.0 517.99 523.81 440.87 530.34 579.54 490.73 537.08 509.23 406.8 816.86 627.57 True False 570.5759634759165 567.9533070113547 470.7900893666769 563.0978973104707 538.8351097044623 486.733657581013 557.5188733014527 499.0730081667929 389.7036106851068 765.2833201938003 550.3828684940031 1.0366891779120364 1.0319240287500755 0.8553865251200248 1.0231021522367862 0.9790186805393515 0.8843546655310118 1.0129655285728199 0.906774241597294 0.7080591221006599 1.3904562877980253 1.0 9.10429175443066 -8.517849290785044 24.851609436267328 0.8592589110532447 0.9701374393124952 0.0 0.18048712847071877 281.2794256349814 1389865.926819908 0.019188188926751237 0.022057076195665826 3.0349441902119693e-09 8.517849290785044 0.11087852825925049 LDVSRS(ph)PPLMVK ddPTM_A549_MK2206_60min_R1 3 LDVSRSPPLMVK 12 1 D6RCP5;Q8N264-3;Q8N264-2;Q8N264 D6RCP5 ARHGAP24 Rho GTPase-activating protein 24 1 LDVS(0.057)RS(0.943)PPLMVK;LDVS(0.001)RS(0.999)PPLMVK;LDVS(0.034)RS(0.966)PPLMVK 82.90799999999999 0.00017009 13872000.0 3799.8 4132.02 3253.41 3302.68 4706.1900000000005 3848.55 3632.4900000000002 3140.02 5371.0 5576.1 5731.7 True False 4441.113343809333 4342.322168715612 3714.79245915953 4111.836748262938 4013.915685252197 4255.801006539265 4292.466413287842 3585.127450907948 4154.477075724557 4316.455137230361 4308.360703127511 1.030812796288262 1.007882688550995 0.8622287489677686 0.9543854453221818 0.9316572965532872 0.9878005347718233 0.9963108265684136 0.8321326132942963 0.964282557100837 1.0018787735430261 1.0 12.072923324430223 -9.817674656365861 1.41235544262075 0.9927199775039971 0.9504446869520183 0.09380902848138462 0.05704922508189335 0.6800702756314748 2.7273921931567675 0.015223510481315343 0.010365806088792362 1.5216870464059256e-10 9.817674656365861 -0.04227529055197876 LDVSRS(ph)PPLMVK ddPTM_A549_PD325901_60min_R1 5 LDVSRSPPLMVK 12 1 D6RCP5;Q8N264-3;Q8N264-2;Q8N264 D6RCP5 ARHGAP24 Rho GTPase-activating protein 24 1 LDVS(0.03)RS(0.97)PPLMVK;LDVS(0.009)RS(0.991)PPLMVK;LDVS(0.018)RS(0.982)PPLMVK;LDVS(0.006)RS(0.994)PPLMVK;LDVS(0.011)RS(0.989)PPLMVK 84.566 0.000131 45736800.0 7470.98 8062.98 8477.32 8604.66 9073.16 10042.7 8827.32 9177.79 9646.599999999999 9056.7 9409.3 True False 8229.428389755209 8742.475621630767 9052.641913466357 9136.15030559927 8435.892542302752 9960.91558084658 9163.248493094852 8994.731778613028 9241.186948955135 8484.858416373912 8252.015750467082 0.9972628068832037 1.0594351593592055 1.0970218898278228 1.1071416465827932 1.0222826515842824 1.2070887746769958 1.1104254730216907 1.090004194199933 1.119870250905915 1.0282164592201184 1.0 13.010530859533972 -4.475685455050584 16.343316212270857 1.072397824910942 1.0811494003191964 0.0 0.05991138722843193 0.0 0.0 0.008564152828051648 0.0 3.3443717397611956e-05 4.475685455050584 0.00875157540825433 LDVTILS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 LDVTILSPSR 10 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 LDVTILS(0.984)PS(0.016)R;LDVTILS(1)PSR 139.86 1.3436e-07 49219000.0 1116.91 1318.9 1093.33 1190.9099999999999 1415.9 1419.6100000000001 1588.42 1044.65 1730.6100000000001 1757.49 1980.55 True False 1305.41710217224 1386.0263765226252 1248.3806342799978 1482.6830034619813 1207.6229856313887 1569.8321879391476 1877.015353158488 1192.7323366064506 1338.629598216287 1360.471788370184 1488.7247746007638 0.8768693343753334 0.9310158601305741 0.8385570359133575 0.9959416466751534 0.8111794780571452 1.0544811335998185 1.260820928879788 0.80117719336424 0.8991786937751953 0.9138504386984667 1.0 10.539861347500961 -7.261904992470275 24.99998774517664 0.9707635900115672 0.8959002588575694 0.13688263364149456 0.1172367956393587 89.46574582368363 4803720.965494857 0.01770331080711869 0.029378370495070066 5.471356427944976e-08 7.261904992470275 -0.07486333115399779 LDVTILS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 LDVTILSPSR 10 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 LDVTILS(1)PSR;LDVTILS(1)PSR 227.36 4.0637e-35 95854000.0 7825.0 9432.3 9599.2 8790.9 9464.4 10182.9 9506.1 11265.0 9999.900000000001 9900.599999999999 11284.7 True False 8619.388239539463 10227.193023659735 10250.659436678852 9333.893927417543 8799.653194407483 10099.973838529735 9867.85983743752 11040.310737778456 9579.63897858898 9275.474426353028 9896.753439607177 0.87093088578365 1.03338868509446 1.0357598074187977 0.9431268531014374 0.8891454402805411 1.020534046863213 0.997080496917906 1.1155487307175624 0.9679577284658732 0.9372239576296034 1.0 13.272739621496966 LDVTILS(ph)PSRK ddPTM_A549_MK2206_60min_R1 3 LDVTILSPSRK 11 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 LDVTILS(0.99)PS(0.01)RK;LDVTILS(0.993)PS(0.007)RK;LDVTILS(0.989)PS(0.011)RK 149.57 4.7694e-12 112084200.0 45053.6 50948.2 51119.7 46448.3 66190.2 51830.6 46460.8 46375.3 70422.0 71133.0 71885.4 True False 52657.54622523501 53541.245762643164 58369.24214116801 57828.13558514341 56453.70926162778 57315.279689632196 54902.12596166369 52949.14079339981 54471.52944082566 55064.00589598594 54034.27124388969 0.9745212623958472 0.9908756892635564 1.0802263229888296 1.0702121867088703 1.044775990534187 1.0607208789942462 1.0160611903852064 0.9799177369193706 1.0080922382567603 1.0190570656065374 1.0 15.721587106653125 -7.9901790650454165 20.704520547051175 1.0019379130757455 1.0386196092030953 0.22191618042516925 0.030841591553834792 30.034022911784124 63314.45173953953 0.0049504121074373615 0.00683031703162126 1.0228711627532933e-08 7.9901790650454165 0.03668169612734973 LDVTILS(ph)PSRK ddPTM_A549_PD325901_60min_R1 6 LDVTILSPSRK 11 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 LDVTILS(0.999)PS(0.001)RK;LDVT(0.348)ILS(0.633)PS(0.018)RK;LDVTILS(0.929)PS(0.071)RK;LDVTILS(0.759)PS(0.241)RK;LDVTILS(0.994)PS(0.006)RK;LDVT(0.001)ILS(0.988)PS(0.01)RK 153.81 3.7365e-13 218928900.0 61066.700000000004 61934.3 62872.0 64729.6 73906.4 73929.1 72187.90000000001 72916.5 71621.70000000001 74011.5 76193.6 True False 67266.14642907155 67153.72081944477 67138.8720000492 68727.80038041229 68715.46942723861 73327.04592071503 74935.05003723463 71462.12320561231 68611.68902017084 69338.40125911844 66822.27023102551 1.006642638696821 1.0049601814974758 1.004737967865041 1.0285163934538404 1.028331859867492 1.0973444282452611 1.1214083235747707 1.069435727917435 1.0267787787358729 1.0376540787883124 1.0 16.02804137741845 -6.321989311649883 3.541650288467765 1.032947630070452 1.0050916141730968 0.11702649411463384 0.03627836244299336 0.5679239580587475 14.203027183918895 0.006455724463668007 0.016542134164545613 4.7644271231441624e-07 6.321989311649883 -0.027856015897355313 LDVTILSPSR ddPTM_A549_PD325901_60min_R1 2 LDVTILSPSR 10 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 106.18 0.00082999 5748300.0 2617.5 2354.8 2754.0 2932.5 3498.6 3234.4 2724.6000000000004 3003.7 3786.5 3047.0 3313.2 False True 2883.2266730983433 2553.2472601713184 2940.9030011473383 3113.6338648092838 3252.87040551477 3208.0601187619022 2828.2861439583266 2943.788847142934 3627.3665729084464 2854.611899995726 2905.697404105249 0.9922666651471834 0.8787037688659599 1.012116057574457 1.0715616362564995 1.119480094836794 1.1040585692885525 0.9733588019049907 1.0131092256832623 1.2483634971017985 0.9824188492451595 1.0 11.504668754898137 -6.1203431914279625 2.5858941649627023 1.0993299796023879 0.9357596842905159 0.17712163649681145 0.0837686619959508 0.27669150450381197 3.5581676055965965 0.014453721470320565 0.04739933638292716 7.579783629823419e-07 6.1203431914279625 -0.16357029531187195 LDYGQHVVAGT(ph)PGR ddPTM_A549_MK2206_60min_R1 2 LDYGQHVVAGTPGR 14 0 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 LDYGQHVVAGT(1)PGR;LDYGQHVVAGT(1)PGR 83.229 0.00028945 33326000.0 3463.9 3923.6000000000004 3544.7 3198.4 5311.3 4375.3 3795.8 4062.8 5757.7 5756.5 5246.700000000001 True False 4048.521635775866 4123.294480949408 4047.3917612544337 3982.0081435816332 4530.014805836565 4838.291341910914 4485.447726368962 4638.714341803176 4453.590143157563 4456.102651937119 3943.799588446557 1.0265535925395637 1.0455131881013136 1.026267098640446 1.0096882598312067 1.1486422431574204 1.2268096371034645 1.137341699489288 1.1762043779791411 1.1292638084867315 1.1299008866960087 1.0 11.945370524993384 -6.740984811802757 24.94012821404977 1.094886508288043 1.0282747516955746 0.3110977368178707 0.06087939714944244 391.4271302144265 477262.1016517392 0.011559001794117677 0.024039758292519805 1.8155791563087594e-07 6.740984811802757 -0.06661175659246843 LDYLSSLK ddPTM_A549_MK2206_60min_R1 2 LDYLSSLK 8 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ; 128.69 0.0029525 2531400.0 2839.8 2955.3 2470.9 2260.7 4443.700000000001 3225.6 2682.6000000000004 3245.8999999999996 4471.3 3997.0 4252.0 False True 3319.088813555908 3105.712146893106 2821.310774644845 2814.5716014866807 3790.037616533797 3566.9308510200094 3169.993695863159 3706.0162651518463 3458.557689198886 3094.074923962941 3196.111050769962 1.0384773122186477 0.9717159690508631 0.8827323987898277 0.8806238446591629 1.1858278878078266 1.1160221889538897 0.9918283956683823 1.1595392670286113 1.0821143678238898 0.9680749119207107 1.0 11.64210182109185 -6.739782681850403 24.999991120816098 1.0597135177932384 0.9410783620932287 0.39189290826197076 0.07603736478389021 209.15107714535307 241437.98413044383 0.010833910914381194 0.022537126574930268 1.8206116530080683e-07 6.739782681850403 -0.11863515570000971 LDYLSSLK ddPTM_A549_PD325901_60min_R1 2 LDYLSSLK 8 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ; 128.69 0.0029525 6547400.0 3350.8 3780.8 4181.9 3701.6 4771.3 4133.7 3930.7 4158.6 4330.0 4387.5 4195.4 False True 3690.970749271414 4099.421284718753 4465.708881807572 3930.23942505645 4436.180348091418 4100.036517723869 4080.284939461574 4075.6534606414125 4148.025157980611 4110.472501224568 3679.3923968318154 1.0031468109923716 1.114157133185525 1.2137082431471087 1.0681762098656913 1.2056828600046148 1.1143243436753998 1.1089561806386707 1.1076974187778401 1.1273668884983068 1.1171606770628595 1.0 11.845251828538967 -10.714674016034621 0.6670079238099996 0.986644183407567 1.1231137187430191 0.0 0.06470937538276547 0.7421880865122347 0.49535209120395474 0.05862590682158531 0.010569393755882296 1.9289722677359175e-11 10.714674016034621 0.13646953533545214 LDYSKFQELVLPHFGK ddPTM_A549_PD325901_60min_R1 1 LDYSKFQELVLPHFGK 16 1 F5GXF0;P22736;P22736-2 F5GXF0 NR4A1 Nuclear receptor subfamily 4 group A member 1 0 55.841 0.026205000000000003 2173900.0 1263.8 1382.6 1084.5 1621.1 1451.0 1722.9 1515.3 1336.5 1848.2 1416.6 1367.7 False True 1392.1000456396134 1499.1165542351223 1158.1006916282818 1721.2316652147756 1349.0867656782523 1708.8692736256735 1572.9655707039765 1309.8424590360332 1770.5265812886278 1327.1556342415308 1199.4815705646354 1.1605847724565757 1.2498037410691012 0.9655010298183454 1.4349796674279334 1.124724880135668 1.4246732217996918 1.3113711867732407 1.0920071564079532 1.4760765190041083 1.1064410382035257 1.0 10.228195276174834 -6.255384494047503 24.93088359330096 1.244382537213112 1.13774726924647 0.0990411605610666 0.16125515256049874 1218.7488883447977 5018159.892204934 0.02687834239465626 0.06909419603077648 5.554123162058863e-07 6.255384494047503 -0.10663526796664202 LDYVPS(ph)S(ph)ASREVR ddPTM_A549_MK2206_60min_R1 1 LDYVPSSASREVR 13 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 2 LDY(0.008)VPS(0.664)S(0.664)AS(0.664)REVR 41.54 0.027422000000000002 3118100.0 223.5 232.63 421.13 368.35 502.48 317.82 348.24 299.94 464.59 485.88 636.76 True False 261.22133594962514 244.46987335693262 480.8525664843513 458.5957665358597 428.56585763123087 351.4515014481582 411.51070030842686 342.4574135277259 359.36110679777926 376.1193705416847 478.6349183180339 0.5457632236017806 0.5107648105073941 1.0046332770164585 0.95813269986111 0.8953919599874781 0.7342788584735739 0.8597590450661486 0.7154877348505037 0.7508041997032028 0.7858168222732306 1.0 8.902781840822964 -14.999999999566853 0.27521197727917046 2.655007368834837 0.7632453052799609 0.0 0.16120964210429445 51.79844116795149 0.6801566133611403 47.12908964971992 0.06645558886679609 1.0000000009973575e-15 14.999999999566853 -1.891762063554876 LDYVPS(ph)S(ph)ASREVR ddPTM_A549_PD325901_60min_R1 2 LDYVPSSASREVR 13 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 2 LDY(0.013)VPS(0.807)S(0.645)AS(0.535)REVR;LDY(0.009)VPS(0.664)S(0.664)AS(0.664)REVR 44.601000000000006 0.01699 19084400.0 1711.26 1981.57 2010.21 2104.12 2513.1 1923.73 1919.04 2519.5 2141.01 2428.6 2521.8 True False 1884.9858554369712 2148.5638582205193 2146.6349389747265 2234.0867135967646 2336.5885257243385 1908.063780690649 1992.0701173389805 2469.246595990487 2051.030795262832 2275.2577815325308 2211.6345870073096 0.852304384508498 0.9714823012999924 0.9706101322458798 1.0101518246826824 1.0564984556902373 0.8627391667230888 0.9007229897026369 1.1164803672797354 0.9273823113962962 1.0287674984371236 1.0 11.110897323462043 -5.3297233411070595 0.004259205243758627 1.9026487122112057 1.8728039368440423e-06 0.05832292127189165 0.07562821100967562 112807.32522866031 71.91329734473562 15551.561705386022 16586.2107338953 4.680331978303755e-06 5.3297233411070595 -1.9026468394072689 LDYVPS(ph)SASR ddPTM_A549_MK2206_60min_R1 1 LDYVPSSASR 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LDYVPS(0.967)S(0.033)ASR 88.338 0.00070588 21440000.0 2373.7 2320.7 2330.5 2155.4 3029.3 2359.8 2197.3 2301.0 3436.2 3205.9 3473.7 True False 2774.3225286068223 2438.813717488861 2660.999943465868 2683.4730967595815 2583.6939828894465 2609.5124696915345 2596.5209676881095 2627.1737965169596 2657.906186483844 2481.68496340575 2611.084420757198 1.062517361197493 0.93402331157934 1.01911677857363 1.0277236061105184 0.9895099378442124 0.9993979700337656 0.9944224503224353 1.0061619515753135 1.0179319233627337 0.9504422544431086 1.0 11.350433387827527 -8.512217326157264 22.699706506496856 1.0086562242370978 1.0018032230535034 0.0 0.03439499096154661 781.066197696607 1663012.6794760986 0.004510806343498064 0.005294629172881458 3.0745578841553826e-09 8.512217326157264 -0.006853001183594332 LDYVPS(ph)SASREVR ddPTM_A549_MK2206_60min_R1 1 LDYVPSSASREVR 13 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LDYVPS(0.39)S(0.343)AS(0.267)REVR 74.816 0.00031168 21157000.0 1057.6 1095.7 858.99 888.92 847.36 920.69 720.22 764.16 1154.3 1621.0 1547.6 True False 1236.097024162521 1151.4664498869063 980.8076985358274 1106.7054399051353 722.714466491004 1018.1168046954399 851.0746513213168 872.4820201418515 892.8528930383269 1254.8149741666055 1163.2882084128862 1.0625888023475887 0.9898376357290608 0.8431338781246454 0.9513596303147019 0.6212686256633067 0.8752059870739095 0.7316111735392443 0.7500136370609383 0.7675250953127742 1.0786793548596116 1.0 10.1839928581166 -5.596713937204282 2.205351122501024 0.8500371603778315 1.0690375048016758 0.24345538802937272 0.12419069855385835 0.411458860956645 3.450930710912001 0.017416131648361668 0.13349441432279666 2.53096455319508e-06 5.596713937204282 0.2190003444238443 LDYVPS(ph)SASREVR ddPTM_A549_PD325901_60min_R1 2 LDYVPSSASREVR 13 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LDYVPS(0.356)S(0.356)AS(0.288)REVR;LDYVPS(0.362)S(0.362)AS(0.276)REVR 77.146 0.00026164 8925000.0 1669.54 1705.37 1698.48 1809.42 2036.2800000000002 1973.35 1843.96 1691.35 1722.5 1990.35 2231.8 True False 1839.0304717496106 1849.0875148965356 1813.7490665899552 1921.1837639090252 1893.258717584639 1957.2796918621066 1914.1329068536288 1657.6146974115934 1650.109315155103 1864.678961324743 1957.302748545846 0.9395738462615942 0.9447120616727751 0.9266573952023813 0.9815465519252681 0.9672794456510176 0.9999882201750564 0.9779442185301739 0.8468872271512916 0.8430526735738921 0.952677843379152 1.0 10.934651208764098 LDYVPSSAS(ph)R ddPTM_A549_MK2206_60min_R1 1 LDYVPSSASR 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LDYVPSS(0.001)AS(0.999)R 125.23 1.5636e-05 16007000.0 2425.4 2155.5 2060.7 1937.7 3813.8 2804.9 2778.0 3030.3 4244.7 3368.9 3403.4 True False 2834.7482246631807 2265.20574311511 2352.938246513671 2412.4365869866588 3252.795072110309 3101.7126562580697 3282.7266409855556 3459.854304904539 3283.2822273930406 2607.8631501973364 2558.2418509384947 1.1080845322045096 0.8854541028965327 0.9197481644084949 0.9430056763795233 1.2714963094349412 1.2124391816669726 1.2831963638548414 1.352434408668315 1.2834135389461179 1.019396641189588 1.0 11.320936944759715 -6.748321045616111 24.841950686730108 1.179004084313458 0.9552913343466097 0.4870280743226364 0.1162530350574285 184.77020698770616 349893.5642312671 0.020158176675455847 0.041759755673431674 1.7851674289869695e-07 6.748321045616111 -0.2237127499668482 LDYVPSSAS(ph)R ddPTM_A549_PD325901_60min_R1 2 LDYVPSSASR 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LDYVPS(0.003)S(0.017)AS(0.98)R;LDYVPS(0.154)S(0.13)AS(0.715)R 69.554 0.0035475000000000003 14829900.0 5186.8 4942.8 5027.8 5640.3 7096.1 5104.0 4537.0 4643.6 6079.0 5708.5 7590.5 True False 5713.360117679654 5359.347102758108 5369.016742617502 5988.688520949293 6597.694416216023 5062.434716225806 4709.65801774166 4550.97975516627 5823.5207702919415 5348.064335781298 6656.9166201439375 0.8582592277618339 0.8050794998003485 0.8065320701735651 0.8996189771744211 0.9911036584492124 0.7604774109543143 0.7074834020738908 0.683646801492891 0.8748075276577557 0.8033846059597575 1.0 12.700638382847837 -9.768404818602022 1.1389010112800564 0.9773394670644836 0.8194514956225173 0.0 0.09824754091880254 0.3465906365467695 0.9173098198495059 0.02687859323477266 0.01752005676618708 1.7044928406043936e-10 9.768404818602022 -0.1578879714419663 LDYVPSSAS(ph)REVR ddPTM_A549_MK2206_60min_R1 1 LDYVPSSASREVR 13 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LDYVPS(0.079)S(0.061)AS(0.859)REVR 85.16 8.9597e-05 17049000.0 1248.8 1557.6 1173.1 1169.7 883.19 896.99 1039.0 1077.7 1569.0 1814.0 2033.5 True False 1459.5669097713283 1636.8751869524913 1339.4632197724984 1456.2765525098282 753.273920954719 991.9088864262266 1227.7728509661606 1230.4672753178297 1213.6240051781479 1404.216140122285 1528.5258282551067 0.954885342982723 1.070884872662617 0.8763104914632465 0.9527327085942965 0.4928107245754696 0.6489317145255852 0.8032398460467812 0.8050026061531936 0.793983315652287 0.9186734788284684 1.0 10.577925215022878 -5.981184103122024 2.592800913674259 0.8422363980623815 1.0112176573574978 0.2079441602621105 0.14033797004502482 0.4383289560525481 5.837992548216788 0.023119458735937085 0.08637306182814729 1.0442774424855587e-06 5.981184103122024 0.16898125929511632 LDYVPSSAS(ph)REVR ddPTM_A549_PD325901_60min_R1 2 LDYVPSSASREVR 13 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LDYVPSS(0.002)AS(0.998)REVR;LDYVPSSAS(1)REVR 149.99 2.382e-13 74638000.0 5924.4 5143.3 5558.200000000001 5246.0 5940.5 6561.7 6184.8 5729.1 6064.6 6353.799999999999 6526.6 True False 6525.840726687232 5576.743941412921 5935.412876171801 5570.033505469568 5523.2597736124435 6508.263690724705 6420.16594845242 5614.828606107994 5809.725952214599 5952.619983653707 5723.869575526176 1.1401099624264819 0.9742961239469314 1.036958092397865 0.9731237639106292 0.9649520662085856 1.1370391314561745 1.121647840458041 0.9809497809166698 1.0149997087731564 1.039964294278404 1.0 12.482775083755786 LEAAYLDLQR ddPTM_A549_PD325901_60min_R1 1 LEAAYLDLQR 10 0 E5RIW3;E5RJD8;E5RHG6;O75347;O75347-2 E5RIW3 TBCA Tubulin-specific chaperone A 0 90.65700000000001 4.0766e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LEAAYS(ph)PR ddPTM_A549_MK2206_60min_R1 1 LEAAYSPR 8 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 LEAAYS(1)PR 76.221 0.0046933999999999995 2454800.0 1353.1 1507.1 1329.3 1335.1 1953.9 1413.7 1137.2 1525.9 1877.0 1794.5 1745.1 True False 1581.4701998811527 1583.804952655432 1517.8147285342966 1662.1995599349154 1666.4838983156794 1563.296795661889 1343.814519844772 1742.2009978727633 1451.86249695308 1389.1212036656236 1311.7435076901834 1.2056245680727053 1.2074044532107615 1.157097191360969 1.2671681240960295 1.2704342644318856 1.191770179533543 1.0244491487600815 1.3281567529467417 1.1068188929020344 1.0589884344933354 1.0 10.357269934222488 -9.485202577947039 0.5595790461775257 1.0010194449179843 1.2136009105027743 0.41376773993521 0.07794708403451227 0.43406111248833235 0.3039355035471272 0.03733268192513657 0.020700248093806908 3.2718804144803957e-10 9.485202577947039 0.21258146558478996 LEADIESY(ph)QS(ph)RLAAAIS(ph)K ddPTM_A549_PD325901_60min_R1 1 LEADIESYQSRLAAAISK 18 1 A0A494C151;Q5VUR7;Q5TYW2;Q5SQ80;Q4UJ75 A0A494C151 ANKRD20A3;ANKRD20A1;ANKRD20A2;ANKRD20A4 Ankyrin repeat domain-containing protein 20A3;Ankyrin repeat domain-containing protein 20A1;Ankyrin repeat domain-containing protein 20A2;Ankyrin repeat domain-containing protein 20A4 3 LEADIES(0.034)Y(0.968)QS(0.999)RLAAAIS(0.999)K 42.338 0.054027 5507900.0 1342.0 1281.7 1217.7 1363.4 1834.2 1504.4 1249.3 1297.6 1735.1 1653.1 1502.1 True False 1478.238852071815 1389.7133571265413 1300.3404446249508 1447.6141214939391 1705.3721196464862 1492.1486651822302 1296.8427951431918 1271.7183500524932 1662.1797809727832 1548.7229838801893 1317.3512225964316 1.1221296391696378 1.0549300241946773 0.9870871353973821 1.098882436713245 1.2945462761899482 1.1326885644371147 0.9844320731620693 0.9653601319365701 1.2617590149548061 1.1756340733701494 1.0 10.363424322393824 -6.506263441218878 24.38802927108909 1.1170120829053525 1.0527783233938686 0.062448499368793264 0.10425036373922723 1431.8146413509344 2101621.503557241 0.017621442169868776 0.039985273992437995 3.116998252393315e-07 6.506263441218878 -0.06423375951148391 LEADQS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LEADQSPK 8 0 P49454 P49454 CENPF Centromere protein F 1 LEADQS(1)PK;LEADQS(1)PK 127.76 0.0010635999999999998 31979000.0 7289.1 7469.9 7024.3 5942.3 10440.400000000001 7391.0 7570.6 7824.299999999999 11388.1 10085.8 9744.7 True False 8519.321878614815 7850.086003477415 8020.4513636075 7398.1637667599825 8904.63099031425 8173.11071425127 8946.080024566327 8933.4184859138 8808.713533058804 7807.410775107687 7324.822049961905 1.1630756106435545 1.071710131649989 1.0949687663264411 1.0100127643098795 1.2156788150724511 1.1158101396188562 1.2213375237713595 1.2196089440780697 1.2025839635386935 1.0658840203699274 1.0 12.838577995629608 -4.850695196364201 15.943356192520577 1.115243765433003 12.652973443964553 0.01608379064388976 0.07917824139803753 352.4480750123055 37642.124114684666 0.012838542494626591 24.184571553622654 1.410278235640046e-05 4.850695196364201 11.53772967853155 LEADQS(ph)PK ddPTM_A549_PD325901_60min_R1 1 LEADQSPK 8 0 P49454 P49454 CENPF Centromere protein F 1 LEADQS(1)PK 105.2 0.0020029 85346000.0 5836.3 5614.7 5490.6 5321.4 6142.9 5498.3 4498.8 5262.4 5760.3 5767.1 7295.5 True False 6428.796879543025 6087.870473791365 5863.225133659978 5650.090792223742 5711.443895854542 5453.523667755553 4670.004295837818 5157.437303727062 5518.214622982839 5402.964321780559 6398.19974998486 1.004782146659025 0.9514974073458351 0.9163866966913392 0.8830750856500083 0.89266420540685 0.8523528306174651 0.729893482279741 0.8060763191613806 0.8624636364308407 0.8444507100287614 1.0 12.643450318349513 -4.173153361105858 13.306476466924108 0.9068599412374702 10.797741513580725 0.0 0.08058071321594185 0.0 0.0 0.012173650126334336 0.0 6.711917951301775e-05 4.173153361105858 9.890881572343254 LEADQS(ph)PKNSAILQNR ddPTM_A549_PD325901_60min_R1 2 LEADQSPKNSAILQNR 16 1 P49454 P49454 CENPF Centromere protein F 1 LEADQS(1)PKNSAILQNR;LEADQS(0.997)PKNS(0.003)AILQNR 140.2 4.5026e-12 17164500.0 6038.1 6918.6 7504.7 7476.0 8081.8 9413.9 7471.299999999999 9374.6 8798.3 7276.0 8971.0 True False 6651.083466985711 7501.654702828815 8014.01407142717 7937.77554077211 7514.162248696421 9337.236319568603 7755.6244099522355 9187.616248768569 8428.538047912427 6816.592118270069 7867.623871854459 0.8453738479770513 0.9534841554468741 1.0186066596417256 1.0089165000844296 0.9550739042797269 1.1867924130144958 0.9857645124212293 1.167775226474188 1.0712939745460603 0.8664105235960328 1.0 12.941712272885917 -4.4376000532393585 0.7504142963703404 1.0472814711352512 0.3106163169134233 0.2836039093279109 0.0863038822423669 5.262630736769686 0.8623563214566179 0.01043076693410879 4.377312782644117 3.6509000772878586e-05 4.4376000532393585 -0.7366651542218279 LEAIEDDSVKETDSSSASAAT(ph)PSK ddPTM_A549_MK2206_60min_R1 1 LEAIEDDSVKETDSSSASAATPSK 24 1 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 LEAIEDDSVKETDSSSAS(0.029)AAT(0.951)PS(0.02)K 189.7 5.6861e-51 9537400.0 3359.9 3819.0 3545.5 3571.7 5347.4 3814.6 3807.3 3792.9 5657.8 5941.1 5646.9 True False 3926.9689783317485 4013.3707877321294 4048.3052132839452 4446.7666603397065 4560.804543657946 4218.258440073454 4499.037127510554 4330.55519026909 4376.317333650047 4599.001383726851 4244.61888348845 0.9251640927310676 0.9455197033929538 0.9537499889641061 1.047624482291593 1.0744909422609077 0.9937896795593268 1.0599390077191122 1.0202459417769951 1.0310271555059758 1.083489827936484 1.0 12.051419307325016 -6.146246919420655 4.887495546553478 1.0230536698127233 0.9387487696143209 0.6527845330407864 0.0301723668086563 0.10135961501779375 3.663402180544243 0.0036067834836296746 0.009913412482372248 7.140902125216205e-07 6.146246919420655 -0.08430490019840242 LEAIEDDSVKETDSSSASAAT(ph)PSK ddPTM_A549_PD325901_60min_R1 2 LEAIEDDSVKETDSSSASAATPSK 24 1 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 LEAIEDDSVKETDSS(0.001)S(0.006)AS(0.006)AAT(0.956)PS(0.031)K;LEAIEDDSVKETDSSS(0.001)AS(0.033)AAT(0.965)PS(0.001)K 177.78 6.930599999999998e-42 23509000.0 6951.7 6764.7 7587.2 7077.299999999999 7380.5 7492.799999999999 6983.2 6542.0 7532.5 7971.7 8484.8 True False 7657.43146642894 7334.785009716719 8102.113017539974 7514.448747285507 6862.119141342761 7431.781121029923 7248.949497353668 6411.514677900283 7215.935219974353 7468.365501541164 7441.223389578724 1.029055447677194 0.9856961181932705 1.0888146469150237 1.00984049985777 0.9221762043796473 0.9987310865358477 0.9741609837309372 0.8616210456575559 0.969724310397685 1.00364753354945 1.0 12.861324114729658 -6.53147961200655 24.874086553296618 0.9720673184289741 1.0329208285086968 0.3289302565328369 0.04528205558404762 184.01437773046246 532177.1413263814 0.006525864970053851 0.013601276047141156 2.941171764078982e-07 6.53147961200655 0.06085351007972273 LEAIIT(ph)PPPAK ddPTM_A549_MK2206_60min_R1 2 LEAIITPPPAK 11 0 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 LEAIIT(1)PPPAK;LEAIIT(1)PPPAK 119.45 1.4654e-05 17232600.0 6158.5 6600.0 6659.9 6286.5 9168.400000000001 7154.799999999999 6385.1 6903.200000000001 9971.5 9065.7 8764.9 True False 7197.904239130948 6935.911809120728 7604.37396416577 7826.69278221171 7819.740505306041 7911.916187028138 7545.190019926881 7881.74974016336 7712.971171213445 7017.752073597906 6588.333431066237 1.092522762310477 1.05275664653151 1.1542181408591976 1.1879624588072892 1.186907218209889 1.2008979614967206 1.1452349974196419 1.1963191940162325 1.1707013999692484 1.0651786444970763 1.0 12.685697855387101 -10.662903972198722 0.8900136897509152 0.998241175889388 1.1556000788376974 0.48128713868868467 0.04703976822528103 0.33626816227236533 0.4662300666677554 0.03452178943881978 0.008802132703949712 2.173181642682255e-11 10.662903972198722 0.15735890294830945 LEAIIT(ph)PPPAK ddPTM_A549_PD325901_60min_R1 2 LEAIITPPPAK 11 0 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 LEAIIT(1)PPPAK;LEAIIT(1)PPPAK 116.54 2.0166e-05 27208000.0 9951.4 10090.1 11919.9 11050.5 12559.9 11636.0 11103.8 12438.5 11172.0 11639.9 12250.5 True False 10961.658802166512 10940.428138209027 12728.856094181618 11733.064287493607 11677.735953302737 11541.24027390351 11526.361185232501 12190.404359685517 10702.479691676532 10904.95472752224 10743.766162317814 1.0202808434730202 1.018304752069249 1.1847666732384976 1.0920811296736532 1.0869313215565586 1.074226681736868 1.0728417773703531 1.1346490770100317 0.9961571696537767 1.0150029852445757 1.0 13.391212189563731 -8.782186981474931 24.71131167806393 0.9981853106612061 1.0860466340796722 0.4009799068645217 0.04437799224660021 134.4526477144742 160138.27476811234 0.007584440576744007 0.008078716056670732 1.6512507144323937e-09 8.782186981474931 0.08786132341846609 LEALDANSR ddPTM_A549_MK2206_60min_R1 1 LEALDANSR 9 0 P09496-2;P09496-4;P09496-3;P09496;F8WF69 P09496-2 CLTA Clathrin light chain A 0 67.563 0.013458000000000001 2299200.0 1323.2 1364.3 1520.1 1222.5 2223.4 1379.8 1573.5 1437.3 2545.8 2086.4 1942.8 False True 1546.5238108659678 1433.7370426035466 1735.6730375723944 1522.012554880111 1896.3408053201695 1525.8095201628867 1859.3845822860962 1641.041676546644 1969.1803648072196 1615.0807909322689 1460.3491414477603 1.059009634732127 0.981776892875199 1.1885329256616561 1.0422251170505834 1.2985530319415095 1.0448251564350086 1.2732466021397735 1.1237324212206876 1.348431213411756 1.1059552439159246 1.0 10.512097615697105 -5.765329913114069 24.937653302602705 1.1661281701651764 1.0203932468501948 0.19206590519893596 0.1082138790685938 123.51883798428739 791761.2272394957 0.01835120926868334 0.06036588962980578 1.7166038684194144e-06 5.765329913114069 -0.1457349233149816 LEALDANSR ddPTM_A549_PD325901_60min_R1 2 LEALDANSR 9 0 P09496-2;P09496-4;P09496-3;P09496;F8WF69 P09496-2 CLTA Clathrin light chain A 0 ; 101.9 0.0019795999999999998 6586400.0 3486.8 3680.1 3832.6 3981.1000000000004 5111.7 3993.7999999999997 4046.9 3958.0 4532.0 4611.8 4875.0 False True 3840.7773691535085 3990.2349423120713 4092.703283296039 4227.003505265896 4752.671826407666 3961.275816940168 4200.906994048652 3879.0545850090652 4341.53580045453 4320.610160945287 4275.405905171163 0.8983421584622023 0.9332996751222677 0.9572666020659834 0.9886788761163651 1.1116305520042538 0.9265262538345073 0.9825750086015452 0.9072950431015906 1.0154675127344943 1.010573091017966 1.0 12.06184568000061 -5.8659840394978335 1.93724584607544 0.9989553324725434 0.9065804200997464 0.2637312223871954 0.04996613918218003 0.3379740950777529 2.3734800623299046 0.006945910281671206 0.036378824647552134 1.3614947170415559e-06 5.8659840394978335 -0.09237491237279705 LEAQDS(ph)GEEAR ddPTM_A549_MK2206_60min_R1 2 LEAQDSGEEAR 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LEAQDS(1)GEEAR;LEAQDS(1)GEEAR 105.0 0.00018342 10334700.0 1613.23 1782.0 1524.8899999999999 1589.4499999999998 2313.3 1764.9299999999998 1564.75 2005.19 2858.0 2457.7 2222.7 True False 1885.5037843132598 1872.6961884625978 1741.1423315990833 1978.865321353121 1973.0166344099798 1951.6937211342834 1849.0448205479313 2289.431823136828 2210.667563288174 1902.5038630532197 1670.7422466007497 1.1285425912641274 1.1208767793313053 1.04213701134425 1.1844228667703058 1.1809222149162923 1.1681596757998731 1.106720575426851 1.3703082134870586 1.3231649392872795 1.1387177566880866 1.0 10.706273463762162 -6.288314390065044 23.687555512037566 1.172762150477452 1.0995545675745477 0.13156797156166733 0.09621386340572495 914.6179889864793 806140.2243092644 0.01870806767303572 0.04348696892671592 5.148558004460087e-07 6.288314390065044 -0.07320758290290419 LEAQDS(ph)GEEAR ddPTM_A549_PD325901_60min_R1 1 LEAQDSGEEAR 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LEAQDS(1)GEEAR 52.576 0.022452 8138300.0 904.33 1138.1 751.83 1174.4 1054.0 925.11 739.1 945.97 1290.5 1250.4 1153.9 True False 996.1369158674399 1234.0116811622977 802.8537049210619 1246.9400207440822 979.9706761026034 917.5762108792426 767.2268549510384 927.1018862508909 1236.2647728346362 1171.449530605401 1011.9776151747701 0.9843467888322861 1.2194061041055557 0.793351248962565 1.232181425800346 0.9683718902550635 0.9067159165578734 0.7581460730418796 0.9161288474654441 1.2216325285230063 1.157584429773271 1.0 9.982961662803477 -8.744461017270579 24.99852900302251 1.1046598205073528 0.9738039185374883 0.1725099468707295 0.1481878653553311 376.7502984718962 554717.8499865287 0.02650666201061178 0.030017988932556763 1.8011047962469873e-09 8.744461017270579 -0.13085590196986452 LEAS(ph)IER ddPTM_A549_MK2206_60min_R1 3 LEASIER 7 0 Q9UBI6 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 1 LEAS(1)IER;LEAS(1)IER;LEAS(1)IER 88.177 0.012816999999999999 62865900.0 3842.0299999999997 4327.3 3631.9300000000003 3929.33 4328.6 3684.71 4454.83 4281.780000000001 5250.4 4832.110000000001 4554.2699999999995 True False 4490.470735384958 4547.541086607295 4146.992286922115 4892.016026394326 3691.8686740617454 4074.623566487457 5264.214946746469 4888.7354274013005 4061.19278316593 3740.532994953856 3423.3190675423593 1.311730121203315 1.3284011793478625 1.2113952001264345 1.4290271896584743 1.0784471447799286 1.1902552715930965 1.5377517674756827 1.428068880214248 1.1863319495023021 1.0926626823713597 1.0 11.741180048440942 -9.543030505332098 1.1519354140318547 1.0401070490262136 1.3062483849396058 0.38520318040911283 0.12557457940112046 0.2839519840738897 0.779699217820272 0.034686104399769074 0.025578928650915433 2.8639767938951565e-10 9.543030505332098 0.2661413359133922 LEAS(ph)IER ddPTM_A549_PD325901_60min_R1 4 LEASIER 7 0 Q9UBI6 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 1 LEAS(1)IER;LEAS(1)IER;LEAS(1)IER;LEAS(1)IER 95.35799999999999 0.011904999999999999 77037000.0 10222.4 8572.1 9142.699999999999 9446.5 9747.9 8993.5 9415.5 8438.2 9083.5 8482.05 10104.300000000001 True False 11260.170522666855 9294.500950787566 9763.178601521344 10029.988850441905 9063.241132429386 8920.25991778542 9773.812004859294 8269.893481360157 8701.752083722142 7946.491915444286 8861.535156435077 1.2706794391590193 1.0488590054329443 1.1017479961619867 1.1318568028428257 1.0227619675861506 1.0066269286657064 1.1029479466389904 0.9332348555153809 0.9819689173611298 0.8967398735278611 1.0 13.11334093499137 -2.000000000053127 0.3340834854564151 0.9881918112035206 3.4661995956656786 0.6288747178601264 0.06022531981027625 22.460123539120737 0.278815170396038 0.014106452721029481 35.06704427203788 0.00999999999877671 2.000000000053127 2.478007784462158 LEAS(ph)YSDSPPGEEDLLVHVAEGSK ddPTM_A549_PD325901_60min_R1 2 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEAS(0.977)YS(0.022)DS(0.001)PPGEEDLLVHVAEGSK;LEAS(0.923)Y(0.009)S(0.052)DS(0.016)PPGEEDLLVHVAEGSK 152.99 3.3673999999999996e-29 27160000.0 1393.82 1444.78 1225.9099999999999 1853.37 2016.1 1515.63 1531.6100000000001 1399.15 1573.38 1360.46 1712.87 True False 1535.3195803239473 1566.5366810558507 1309.107624595692 1967.8484555913324 1874.496091167418 1503.2872117855243 1589.8962566791508 1371.2428556380587 1507.2563101763358 1274.5603234224434 1502.1978487775439 1.0220488476756622 1.0428297992376068 0.8714615226356605 1.3099795457653762 1.2478356913457453 1.0007251794488101 1.058380064898225 0.9128244037587635 1.0033673736138742 0.8484636856986935 1.0 10.552859121916784 -7.454711102561574 24.999451559780063 0.9988286045855288 1.0977649639403795 0.19911904662158586 0.12101652138645219 266.8380180874427 97858.27731390887 0.016982778613587345 0.027148842210921283 3.5098527555667934e-08 7.454711102561574 0.09893635935485068 LEASYSDS(ph)PPGEEDLLVHVAEGSK ddPTM_A549_MK2206_60min_R1 1 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEAS(0.001)YS(0.011)DS(0.988)PPGEEDLLVHVAEGSK 166.23 6.699299999999998e-35 4517600.0 558.11 768.72 853.66 762.28 1094.4 687.24 758.54 931.38 1389.6 1076.3 1305.1 True False 652.3053235205603 807.8445645314076 974.7218243892174 949.0386342200496 933.4152097429137 759.9632806470082 896.3568992992022 1063.4059672316241 1074.8578187352157 833.1630824771862 981.0076510724067 0.6649339817151075 0.8234844689012337 0.9935924794507792 0.9674120616517011 0.9514861670268663 0.7746762013693168 0.9137104061516065 1.0839935509872345 1.09566711081225 0.84929315440751 1.0 9.938120578126654 -8.151621103249163 4.844450210210868 1.0491382786143628 0.8735628536005438 0.24294385405486585 0.10922363415135579 0.16828943211038994 6.17355127281565 0.015583085919581116 0.02024456957877749 7.05308141073213e-09 8.151621103249163 -0.17557542501381906 LEASYSDS(ph)PPGEEDLLVHVAEGSK ddPTM_A549_PD325901_60min_R1 4 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEASYS(0.014)DS(0.986)PPGEEDLLVHVAEGSK;LEASYS(0.008)DS(0.992)PPGEEDLLVHVAEGSK;LEAS(0.186)YS(0.169)DS(0.645)PPGEEDLLVHVAEGSK;LEAS(0.007)YS(0.018)DS(0.975)PPGEEDLLVHVAEGSK 186.54 7.427099999999999e-51 34859400.0 5943.6 6454.3 5969.1 6941.9 7691.1 6821.400000000001 6211.1 7142.000000000001 7066.400000000001 7235.199999999999 7522.1 True False 6546.98989655294 6998.226512367818 6374.199021114231 7370.685396801212 7150.903668854585 6765.848780027961 6447.46680934433 6999.547207209392 6769.4237820679355 6778.368237233041 6596.929386520612 0.9924298886585459 1.0608308960631243 0.9662372670137289 1.1172903278094202 1.0839745660255056 1.0256057604394704 0.9773436142151716 1.0610310944833579 1.026147679540087 1.027503530821955 1.0 12.687578947062594 -9.937886421231385 0.5016710587531304 0.9982590337363065 1.0385212801292028 0.019269725214563715 0.04391457636264018 1.9363509144507467 0.9587467470992622 0.03439905804925393 0.011862635159504894 1.1537549538787789e-10 9.937886421231385 0.04026224639289622 LEATAAS(ph)SVK ddPTM_A549_MK2206_60min_R1 1 LEATAASSVK 10 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 LEATAAS(0.98)S(0.02)VK 111.63 0.00015544 2334100.0 4475.9 5355.0 4564.8 4584.5 7050.2 5125.3 4508.1 4564.3 8018.3 6644.8 7899.9 True False 5231.322494751351 5627.546626945684 5212.157280383178 5707.702705806028 6013.124919343464 5667.655844101207 5327.163416208419 5211.30350258251 6202.167852593973 5143.735064985976 5938.136803851744 0.8809703561154196 0.947695685167678 0.877742876688583 0.9611942086116564 1.0126282229542236 0.9544501973118755 0.8971102539693899 0.8775990979531194 1.0444636183812686 0.8662203709502815 1.0 12.535794615434448 -8.77249567140299 24.999988011766618 1.0209967132297095 0.9292998028194335 0.0 0.06221816423080339 133.47218616621166 301800.3342882692 0.007639377973330054 0.00816925109510259 1.6885126887462944e-09 8.77249567140299 -0.09169691041027606 LEATAAS(ph)SVK ddPTM_A549_PD325901_60min_R1 1 LEATAASSVK 10 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 LEAT(0.004)AAS(0.903)S(0.094)VK 53.388000000000005 0.021281 6036000.0 4049.4 4176.8 5070.0 5883.3 5943.6 7144.8 3755.9 5731.4 5710.8 4880.4 5997.7 True False 4460.492106989276 4528.793594480878 5414.080688386715 6246.698079056256 5526.142040306867 7086.615117650894 3898.8328298073425 5617.082730803679 5470.794935841955 4572.250711105727 5260.020922552833 0.8479989286476975 0.8609839506651485 1.0292888123644788 1.1875804623272412 1.0505931671512967 1.347259872535177 0.7412200231163969 1.0678822030383774 1.0400709457989812 0.8692457270467827 1.0 12.360852822735403 -5.762569692270793 5.8190768761928675 1.0400476147926934 0.8519247326589057 0.18715902922069627 0.1468263108995392 0.16090690241734792 19.128658149696534 0.01762898953880819 0.06312099526668732 1.7275487343997046e-06 5.762569692270793 -0.1881228821337877 LEAVTARS(ph)FEEEGEHLGSR ddPTM_A549_PD325901_60min_R1 2 LEAVTARSFEEEGEHLGSR 19 1 Q9BXW6-4;Q9BXW6 Q9BXW6-4 OSBPL1A Oxysterol-binding protein-related protein 1 1 LEAVT(0.478)ARS(0.522)FEEEGEHLGSR;LEAVT(0.13)ARS(0.87)FEEEGEHLGSR 105.16 6.9262e-10 8251900.0 620.0 855.53 538.12 817.78 694.87 963.01 406.24 925.2 689.3499999999999 892.3199999999999 847.77 True False 682.9419435801238 927.6285155827962 574.6400591784341 868.2924132868666 646.0647283713631 955.1675658449475 421.6996855030576 906.7461601946405 660.3790167791994 835.9787629157158 743.4996644568116 0.9185504395339167 1.2476515591442883 0.7728854317617702 1.1678450640878586 0.868950934689886 1.2846913206649218 0.5671820791084611 1.2195649891208682 0.8882035168928574 1.1243835106858695 1.0 9.53818828096082 LEDEDEDLGAPPGEEYGDGS(ph)PSREDSMVPPK ddPTM_A549_MK2206_60min_R1 1 LEDEDEDLGAPPGEEYGDGSPSREDSMVPPK 31 1 A0A494BZV2;H0Y2S9 A0A494BZV2 MPRIP 1 LEDEDEDLGAPPGEEY(0.082)GDGS(0.7)PS(0.103)REDS(0.115)MVPPK 61.415 0.00027893 4275000.0 916.32 418.28 690.16 489.53 1104.9 770.57 522.15 689.73 1041.2 1130.7 1129.4 True False 1070.9724141268919 439.56866538166946 788.0350658581433 609.4648719758366 942.37067365218 852.1112059370316 617.0178961809244 787.5013397095365 805.3698624547405 875.2740846947453 848.9388101457178 1.2615425297178517 0.51778604079394 0.9282589704231798 0.7179137821149015 1.1100572413345373 1.003736895702494 0.7268108005040024 0.9276302724036899 0.9486783415126248 1.0310214048813566 1.0 9.729516760654672 -9.248163120373192 0.4710883745797468 1.0029788391367942 0.8773622827454292 0.04225387264748648 0.19103231156098052 2.1105566909897684 1.1193951683158654 0.09900566302048772 0.06263542932864047 5.647248251535991e-10 9.248163120373192 -0.12561655639136504 LEDEDEDLGAPPGEEYGDGS(ph)PSREDSMVPPK ddPTM_A549_PD325901_60min_R1 2 LEDEDEDLGAPPGEEYGDGSPSREDSMVPPK 31 1 A0A494BZV2;H0Y2S9 A0A494BZV2 MPRIP 1 LEDEDEDLGAPPGEEY(0.04)GDGS(0.32)PS(0.32)REDS(0.32)MVPPK;LEDEDEDLGAPPGEEY(0.122)GDGS(0.725)PS(0.145)REDS(0.008)MVPPK 63.901 0.00022167 13553500.0 2513.5 2475.2 1755.77 2063.2 2858.9 2323.58 2413.3 2383.3 2805.8 3075.8999999999996 3358.7 True False 2768.6686696590964 2683.7937907151563 1874.9271105027115 2190.6391781328275 2658.1007266695756 2304.657534860493 2505.1394521084317 2335.763211837318 2687.881983432331 2881.6871490636217 2945.601192553515 0.9399333068774876 0.9111191961422992 0.6365176369572808 0.7436984964803678 0.9023966765729383 0.7824065052277516 0.8504679650597062 0.7929665488125588 0.9125070937054552 0.9783018680018639 1.0 11.524346400550911 -9.23789513923387 0.8356388919462129 0.9840087602937932 0.8128665565301653 0.37508090758076884 0.08298534645465698 0.3756014608489827 0.5605109556729321 0.024570438896513808 0.019394768612774383 5.782356460326142e-10 9.23789513923387 -0.171142203763628 LEDFFAR ddPTM_A549_MK2206_60min_R1 1 LEDFFAR 7 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 72.234 0.055164 1340700.0 602.66 471.94 558.86 457.23 655.84 615.19 535.01 643.28 804.87 761.91 805.68 False True 704.3742743776334 495.9597301812786 638.1147515148399 569.251370525835 559.3668047859945 680.2889974699278 632.2143917183882 734.4669099623773 622.5682301132792 589.7940018305235 605.6074203632037 1.163087258665351 0.8189459268577561 1.0536772338954177 0.9399676281780618 0.9236458900231489 1.1233168131624527 1.0439343549311655 1.2127772633992695 1.0280062779612305 0.9738883342558842 1.0 9.242239072204727 -7.241155808407442 24.52041276757539 1.0396022963032574 0.9728090406052753 0.1201693415473929 0.10133315731654159 1219.1126508911339 1473760.705389589 0.014005154742301702 0.024236195368249103 5.739105279132409e-08 7.241155808407442 -0.06679325569798211 LEDFFAR ddPTM_A549_PD325901_60min_R1 2 LEDFFAR 7 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 94.40700000000001 0.033311 4326500.0 1651.85 1511.71 1535.3400000000001 1575.29 1836.76 1409.4 1703.53 1846.8200000000002 1800.13 1801.71 1823.28 False True 1819.5445959723006 1639.1071070467058 1639.5374051494407 1672.592085556835 1707.7523140780072 1397.9223136850815 1768.3587663573853 1809.983726297737 1724.476796220701 1687.9497231182486 1599.0281187242 1.1379065662860524 1.0250645925817008 1.025333692354054 1.0460054241518457 1.0679939233592426 0.8742324774128595 1.1058959787200535 1.1319273908340335 1.078453077858688 1.0556097815621877 1.0 10.642979593328535 -5.256330853490702 24.019565052259647 1.038951635737817 1.1379066395491186 0.15896811058965232 0.06387846039729334 455.3441093731731 2140840.1869527367 0.008747143276002978 0.10063421496975125 5.542033498338546e-06 5.256330853490702 0.09895500381130162 LEDFRDYR ddPTM_A549_MK2206_60min_R1 2 LEDFRDYR 8 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;F6THM6;A0A087WSZ2;Q08043;O43707;O43707-2;K7EJH8 P12814-4;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 0 ; 60.43600000000001 0.011426 5495700.0 1238.5 1186.22 1200.48 1150.15 1728.31 923.3199999999999 973.5899999999999 819.01 2320.1 1891.7799999999997 1919.27 False True 1447.5285215821511 1246.5935312447261 1370.726115482473 1431.9368016321964 1474.0778884784124 1021.0251095497873 1150.4787006469153 935.1071756129319 1794.6010544383814 1464.425584101728 1442.662289842724 1.003373091383679 0.8640924075035101 0.9501365115961454 0.9925654893137209 1.0217761279662432 0.707736742506174 0.7974691712308762 0.6481816168598095 1.2439509004106741 1.0150855085159096 1.0 10.494517906188994 -8.776828646021732 24.999999887441408 1.1151990281685153 0.8763256323540073 0.3454772195332598 0.12897051847582067 186.8614584229834 303557.00939113967 0.0250840687056795 0.0267511149748587 1.6717500850949291e-09 8.776828646021732 -0.23887339581450806 LEDFRDYR ddPTM_A549_PD325901_60min_R1 2 LEDFRDYR 8 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;A0A494C1A0;P35609;P35609-2;F6THM6;A0A087WSZ2;Q08043;O43707;O43707-2;K7EJH8 P12814-4;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 0 ; 60.91 0.0112 8159800.0 1403.6100000000001 1547.26 1167.6100000000001 1623.17 1556.27 2021.3 1919.1599999999999 2083.18 2034.0 1585.56 2093.76 False True 1546.1034539169302 1677.6530303094419 1246.8510360093119 1723.4295244134655 1446.9629640400365 2004.839202959878 1992.194684004647 2041.6293406769043 1948.5180534255333 1485.4474710066377 1836.2407934381902 0.8419938493044777 0.9136345496214539 0.6790237099975865 0.9385640110883845 0.7880028421167644 1.091817157163796 1.0849310673871086 1.1118527308469948 1.0611451724569927 0.8089611538502396 1.0 10.842539542063458 -7.261341621484586 24.99993940445626 1.0450666632135557 0.8341599493872764 0.47867015872571994 0.09988449023301288 3.865916065788727 988572.3128640618 0.010287729881067378 0.017111840468391867 5.478458529672935e-08 7.261341621484586 -0.21090671382627924 LEDLDTCMMT(ph)PK ddPTM_A549_MK2206_60min_R1 3 LEDLDTCMMTPK 12 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 LEDLDTCMMT(1)PK;LEDLDTCMMT(1)PK;LEDLDT(0.002)CMMT(0.998)PK 95.09899999999999 0.00010366 11654100.0 4241.150000000001 5264.1 4399.41 3956.92 7613.400000000001 6012.9 5189.79 5395.32 7207.6 6509.4 7331.7 True False 4956.952433837817 5532.020205210972 5023.312491432382 4926.365577632891 6493.478945409998 6649.181086960011 6132.707665270132 6160.123132474522 5575.090108172092 5038.922019025356 5511.036545373972 0.8994591839531059 1.0038075704387432 0.9115004863556944 0.893909074467695 1.1782681700524558 1.2065209570314699 1.112804753657095 1.1177794017071798 1.0116227795389756 0.9143328986368428 1.0 12.428107978817623 -6.723607476728966 24.999262955366003 1.0479315595918137 0.9315240219329552 0.38832802818739487 0.08568378689117659 176.7668768939055 116806.49687574177 0.01301172090259332 0.027085618037059667 1.8896985214710225e-07 6.723607476728966 -0.11640753765885847 LEDLDTCMMT(ph)PK ddPTM_A549_PD325901_60min_R1 3 LEDLDTCMMTPK 12 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 LEDLDT(0.006)CMMT(0.994)PK;LEDLDT(0.003)CMMT(0.997)PK;LEDLDT(0.009)CMMT(0.991)PK 105.65 2.8580000000000002e-08 9096400.0 5147.1 5458.3 5781.4 5932.2 6135.1 6013.7 5155.1 5535.0 4702.6 6006.5 7120.799999999999 True False 5669.629802905246 5918.290096905514 6173.760570382436 6298.618520996297 5704.191740945999 5964.726421035879 5351.280151478963 5424.600082876496 4504.966075732011 5627.2485649243 6244.986742470318 0.9078689894323972 0.9476865750021475 0.9885946640040892 1.0085879731595337 0.9134033387378502 0.9551223512568136 0.8568921556048278 0.8686327620177937 0.7213732008580678 0.9010825478067132 1.0 12.608482793790335 -7.758339154363754 24.152261090971827 0.8643164769305829 0.955548391170231 0.2829802369144613 0.06625369225797069 76.77922267888248 598140.3634728802 0.0156248690372604 0.022623640184736307 1.7444593171253665e-08 7.758339154363754 0.09123191423964816 LEDNDSAAS(ph)DPDAETTAR ddPTM_A549_MK2206_60min_R1 4 LEDNDSAASDPDAETTAR 18 0 Q9BYV8;Q9BYV8-5;Q9BYV8-2;F8WF85;C9J6R3;C9J9X8;C9JCX6;C9JXA0 Q9BYV8 CEP41 Centrosomal protein of 41 kDa 1 LEDNDS(0.124)AAS(0.876)DPDAETTAR;LEDNDS(0.225)AAS(0.773)DPDAET(0.001)T(0.001)AR;LEDNDS(0.012)AAS(0.988)DPDAETTAR;LEDNDS(0.214)AAS(0.786)DPDAETTAR 78.234 0.00037058 9441400.0 1322.47 1484.19 1239.16 1265.23 1575.27 1558.64 1482.73 1222.6100000000001 2020.24 2118.52 2025.7800000000002 True False 1545.670604712754 1559.7289315119533 1414.8915211092738 1575.2114067983325 1343.5498697475512 1723.5742502585026 1752.1228482320068 1395.9187115860939 1562.658865660357 1639.9448606239603 1522.7229173162684 1.0150701661710917 1.024302526595519 0.929185149195073 1.0344701513881283 0.882333781457429 1.1319027451798163 1.1506511318027877 0.9167253580489474 1.0262266679577359 1.0769817948982408 1.0 10.572437729979441 -7.253015850702749 24.950346593444916 1.023693630108535 0.9802246311717362 0.14496996575040544 0.07444605468500093 1315.5433486738425 3896613.173667609 0.010562988825358922 0.018085059192993545 5.584498122915532e-08 7.253015850702749 -0.0434689989367989 LEDNDSAAS(ph)DPDAETTAR ddPTM_A549_PD325901_60min_R1 3 LEDNDSAASDPDAETTAR 18 0 Q9BYV8;Q9BYV8-5;Q9BYV8-2;F8WF85;C9J6R3;C9J9X8;C9JCX6;C9JXA0 Q9BYV8 CEP41 Centrosomal protein of 41 kDa 1 LEDNDS(0.154)AAS(0.846)DPDAETTAR;LEDNDS(0.006)AAS(0.991)DPDAET(0.002)TAR;LEDNDS(0.009)AAS(0.991)DPDAETTAR 165.3 2.7549e-23 5747300.0 783.1 919.31 750.5799999999999 861.34 861.11 773.25 1133.3600000000001 1175.01 1083.06 782.99 913.45 True False 862.5997355122493 996.7834800187251 801.5188724042013 914.5430155549282 800.6286042682284 766.9529083702208 1176.4906349983887 1151.5735037724876 1037.5427546426042 733.5518777740906 801.101440836635 1.076767175217396 1.2442662429588547 1.0005210720469186 1.1416070037270434 0.9994097669230094 0.9573730232831051 1.468591335661204 1.4374877450848609 1.295145285919147 0.9156791392211221 1.0 9.645841127696814 LEDNPSSGS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 LEDNPSSGSPPR 12 0 Q05D32;H0YMH7;Q05D32-2 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 LEDNPS(0.001)S(0.004)GS(0.995)PPR;LEDNPS(0.199)S(0.118)GS(0.683)PPR 122.46 1.056e-05 12136700.0 1924.1 1913.78 1657.71 1526.77 2204.45 1822.8000000000002 1881.1599999999999 2047.22 2266.5 2078.49 2513.0 True False 2248.841040271469 2011.183227584707 1892.7982047984572 1900.8287185393094 1880.178325217257 2015.6874861232857 2222.94242187055 2337.4197043483055 1753.1413688567704 1608.9576654260015 1888.9527447283413 1.190522656825322 1.0647080681067775 1.0020357629807564 1.0062870677120492 0.9953548761155768 1.0670925949569854 1.1768120870542165 1.2374156584231863 0.9281022904090158 0.8517723219473089 1.0 10.8833708954414 -8.833386576050767 24.999999999993694 0.9660481449370095 1.0844434270166432 0.4057242804610336 0.085474193838248 40.604831170751915 14108.408692640654 0.01477737619194023 0.015731715473211505 1.4676193324981012e-09 8.833386576050767 0.11839528207963368 LEDNPSSGS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 LEDNPSSGSPPR 12 0 Q05D32;H0YMH7;Q05D32-2 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 LEDNPS(0.001)S(0.019)GS(0.98)PPR;LEDNPS(0.003)S(0.025)GS(0.972)PPR 139.48 7.7596e-09 12922500.0 1826.0900000000001 1882.4499999999998 1381.81 1793.12 2663.1000000000004 1799.6 1759.8 1895.7599999999998 1866.06 2209.1000000000004 2468.1 True False 2011.4733125035928 2041.0906679588484 1475.5879360985496 1903.8769499290113 2476.053043196248 1784.9446542554786 1826.7701519995105 1857.9475796050508 1787.6359875984517 2069.6170489926344 2164.5393465749626 0.9292847070146485 0.942967690187082 0.6817099159844018 0.879576041406497 1.1439168556183588 0.8246302646703411 0.8439533126944919 0.8583570368193841 0.8258736393159588 0.9561466518349377 1.0 11.079844310480379 -10.946027518085184 1.2170739370140338 0.9997477382217751 0.876334326290066 0.10485744796182828 0.10652809452584401 0.7285774949535111 1.9246601343653869 0.07435986495399224 0.017526355693171916 1.1323286135271467e-11 10.946027518085184 -0.12341341193170907 LEDQLS(ph)EGRNSPEKAENKR ddPTM_A549_MK2206_60min_R1 1 LEDQLSEGRNSPEKAENKR 19 3 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 LEDQLS(0.863)EGRNS(0.137)PEKAENKR 58.015 0.0009737999999999999 12456000.0 905.44 877.91 845.07 1196.9 1181.4 1039.8 1151.3 779.38 1193.4 1769.6 1375.5 True False 1058.2561361173543 922.5918691432087 964.9136332223565 1490.140553730882 1007.6176249911165 1149.8309458366207 1360.4763073314161 889.8595017511462 923.0968054681973 1369.8461309594236 1033.9253881312507 1.023532402110833 0.8923195810199905 0.9332526740313165 1.4412457328513897 0.9745554529929054 1.1121024389534155 1.3158360583352962 0.8606612352942666 0.8928079492627912 1.3248984372415176 1.0 10.013916363876955 -8.319115788235944 24.99992391269304 0.9413131749976285 1.0935401866416647 0.0 0.1943143942161646 360.37306780580434 156203.32790952438 0.025776335626068497 0.031162075258648756 4.796055628635736e-09 8.319115788235944 0.1522270116440363 LEDQLSEGRNS(ph)PEKAENKR ddPTM_A549_MK2206_60min_R1 1 LEDQLSEGRNSPEKAENKR 19 3 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 LEDQLS(0.004)EGRNS(0.996)PEKAENKR 85.573 9.5667e-06 12470000.0 1661.2 1941.7 2042.8 1835.5 2721.0 2019.5 1661.6 2283.0 2705.2 2741.6 3043.1 True False 1941.5699475593613 2040.5242363287455 2332.499757353389 2285.1975823987254 2320.744504486904 2233.2021495643926 1963.4912119012245 2606.622241394272 2092.476519316713 2122.2706558761065 2287.4142847126204 0.8488055532989253 0.8920658797866635 1.01971023480184 0.9990309134953341 1.0145711338768137 0.9762998178727214 0.8583889787799887 1.139549691026676 0.9147781113816038 0.9278033586044245 1.0 11.159501967583598 -5.596686745363513 5.32118344686351 0.974485299627659 0.8584935923152518 0.28868367875448275 0.06845585965236656 0.17257267420677205 8.539767228021153 0.00896971185274056 0.03721677673999129 2.531123025712107e-06 5.596686745363513 -0.11599170731240716 LEDQLSEGRNS(ph)PEKAENKR ddPTM_A549_PD325901_60min_R1 2 LEDQLSEGRNSPEKAENKR 19 3 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 LEDQLS(0.004)EGRNS(0.996)PEKAENKR;LEDQLS(0.073)EGRNS(0.927)PEKAENKR 110.68 1.0076999999999999e-10 37301000.0 3486.7000000000003 3341.2999999999997 3432.1 3890.3999999999996 4448.0 3553.8999999999996 3479.6000000000004 3413.8 4370.1 4428.4 4537.2 True False 3840.667217227124 3622.8830772933698 3665.022944893893 4130.70117226054 4135.587824766963 3524.9582166917894 3612.01808211018 3345.7090809257097 4186.4398944321165 4148.790068244528 3979.1531636805303 0.9651971309580571 0.9104658524735882 0.9210560122053504 1.0380854926528726 1.0393135560888385 0.885856379911591 0.9077353732142425 0.8408093238188111 1.052093177172365 1.0426314086404986 1.0 11.958245716297302 -8.807468587778695 24.999995858213044 1.0245995786896422 0.9409352766371214 0.33628015815214396 0.057899630930797044 118.69165865331517 64464.84394339015 0.010729323106153021 0.011422253006546255 1.5578707104741523e-09 8.807468587778695 -0.08366430205252084 LEDT(ph)WAY(ph)CQDTRK ddPTM_A549_PD325901_60min_R1 1 LEDTWAYCQDTRK 13 1 U3KQR7;D6RBT2;Q6ZV65-2;Q6ZV65-1;Q6ZV65 U3KQR7 FAM47E Protein FAM47E 2 LEDT(0.936)WAY(0.669)CQDT(0.395)RK 40.577 0.034817 22188000.0 1251.7 977.96 614.96 364.85 706.77 306.7 452.8 332.49 453.17 925.82 948.78 True False 1378.7716625471628 1060.376121350918 656.6948836548902 387.38595586553043 657.1289134241339 304.202336886061 470.03155178166753 325.8582261166408 434.1248408411252 867.3635671985701 832.0860748119583 1.6570060529600248 1.2743586913055247 0.789215086676334 0.4655599553845137 0.7897367031080736 0.3655899865345147 0.564883328792504 0.3916160070222074 0.5217306886661123 1.0423964460582809 1.0 9.700588964873395 -5.615607370029225 2.3462204200020884 0.6805809382291756 1.6463892408207597 0.6879348911021985 0.21688971972808033 0.1641405579347822 1.614923122701311 0.034400068817554516 0.23689857393378186 2.4232188014311625e-06 5.615607370029225 0.965808302591584 LEDVKNS(ph)PTFK ddPTM_A549_PD325901_60min_R1 2 LEDVKNSPTFK 11 1 H0YC42;P55327-2;P55327;P55327-3 H0YC42 TPD52 Tumor protein D52 1 LEDVKNS(0.5)PT(0.5)FK;LEDVKNS(0.924)PT(0.076)FK 68.513 0.0011307 14515900.0 5795.299999999999 4845.799999999999 6183.5 6197.700000000001 6288.200000000001 6210.0 6583.9 6211.5 7757.8 9367.8 9261.8 True False 6383.634589725625 5254.172572336576 6603.149494406161 6580.517853002049 5846.538525112331 6159.427818918939 6834.45391734832 6087.60675967252 7431.766644476202 8776.31550928125 8122.657315387546 0.7859047035792683 0.6468539011713669 0.8129297147495275 0.8101434786047085 0.7197815072213695 0.7583020654152837 0.8414061620451652 0.7494600009950154 0.9149427774575049 1.0804734421893456 1.0 12.987736064852013 -8.948920905770702 0.7431665752022873 0.9861385723779011 0.7513301642987011 0.745641161910114 0.06062035463891206 0.1875257262419114 0.22018375363466375 0.014686709588437983 0.013373339061651236 1.124809807018456e-09 8.948920905770702 -0.2348084080792 LEDVKNSPT(ph)FK ddPTM_A549_MK2206_60min_R1 1 LEDVKNSPTFK 11 1 H0YC42;P55327-2;P55327;P55327-3 H0YC42 TPD52 Tumor protein D52 1 LEDVKNS(0.354)PT(0.646)FK 50.155 0.010704 3713200.0 5375.9 4447.6 4487.3 3204.7 5886.3 3829.8 3975.5 3346.8 4838.6 4963.9 4386.5 True False 6283.220491863934 4673.963842764446 5123.66661502441 3989.8516438644474 5020.433067534463 4235.066893984509 4697.796890294487 3821.2191491451385 3742.664825656461 3842.5515424217256 3297.210988758802 1.9056167510315076 1.4175507296012946 1.5539395666496782 1.210068648159632 1.5226302122159152 1.2844391543104592 1.424778974202958 1.1589246675972027 1.1351001917730914 1.1653944972045027 1.0 11.687030492779503 -2.000000000137285 0.14902870726092227 0.9141479973664262 3.8908174098630726 0.6787076809338639 0.13809918273831617 20.719800770529503 0.19308038775710953 0.21726356990669773 13.429551754467589 0.0099999999968389 2.000000000137285 2.9766694124966464 LEEDDGDVAMS(ph)DAQDGPR ddPTM_A549_MK2206_60min_R1 2 LEEDDGDVAMSDAQDGPR 18 0 Q9UBU9-2;Q9UBU9;E9PQA4;E9PIN3 Q9UBU9-2 NXF1 Nuclear RNA export factor 1 1 LEEDDGDVAMS(1)DAQDGPR;LEEDDGDVAMS(1)DAQDGPR 66.289 0.00073182 1910400.0 153.31 315.53999999999996 303.65 463.74 662.33 475.62 137.48 452.54 565.66 247.59 570.6500000000001 True False 179.18497993036695 331.5996382196901 346.7121359508304 577.3563208180799 564.9021343832455 525.949792708996 162.4583364300556 516.6889308456259 437.53891317340384 191.65924704127707 428.94185586121296 0.41773722354654863 0.7730643062424326 0.8082963488249826 1.346001358759653 1.3169666859604008 1.2261563788243846 0.37874209338670856 1.2045663620497882 1.0200424770740315 0.4468187107934967 1.0 8.744638289840365 -5.5038799132099046 1.7685930867522217 1.031603455233794 0.3782248770376377 0.21030553436909383 0.3090440616414873 0.47524302526797935 2.082108437676693 0.03483760192099026 0.44094324949751373 3.1341522291095856e-06 5.5038799132099046 -0.6533785781961563 LEEDDGDVAMS(ph)DAQDGPR ddPTM_A549_PD325901_60min_R1 2 LEEDDGDVAMSDAQDGPR 18 0 Q9UBU9-2;Q9UBU9;E9PQA4;E9PIN3 Q9UBU9-2 NXF1 Nuclear RNA export factor 1 1 LEEDDGDVAMS(1)DAQDGPR;LEEDDGDVAMS(1)DAQDGPR 66.289 0.00073182 1981360.0 642.8299999999999 796.92 574.07 623.3199999999999 730.1 525.502 629.81 586.72 741.1700000000001 772.56 761.91 True False 708.0896283735656 864.079245190983 613.0298423633452 661.8210607375695 678.8202947082649 521.2224859416327 653.7777641952562 575.0174093270642 710.0212023881037 723.7804297540853 668.1999001454274 1.0596972974995307 1.2931448283708578 0.9174348009179963 0.9904536959576474 1.0158940379376382 0.7800397543133328 0.9784164350413217 0.8605469848198378 1.0625880103148388 1.0831794940354844 1.0 9.384135956853912 -5.769878124471544 24.999416056892724 0.9896715355762128 1.17642107931837 0.3846992969214801 0.09911786704926219 131.07061773002272 388295.84317928104 0.013434076713008667 0.04276038136307226 1.6987202953743582e-06 5.769878124471544 0.18674954374215724 LEEET(ph)EEDEEEKEQDEDEYKSEDLSVLEK ddPTM_A549_MK2206_60min_R1 1 LEEETEEDEEEKEQDEDEYKSEDLSVLEK 29 2 A0A6I8PRS5;Q8N954-2;Q8N954 A0A6I8PRS5 GPATCH11 G patch domain-containing protein 11 1 LEEET(1)EEDEEEKEQDEDEYKSEDLSVLEK 69.783 0.00010021 4462700.0 1586.7 1448.7 1171.1 1188.1 1991.0 1986.7 1936.2 1408.8 2094.6 2110.7 2209.9 True False 1854.4961689094864 1522.4326421019998 1337.1795896987235 1479.1845533358355 1698.126537461751 2196.931275335271 2287.9824774212525 1608.5017142690544 1620.176444388877 1633.8914040551854 1661.1208398627796 1.116412559764575 0.9165092662540816 0.804986342720969 0.8904737800159239 1.0222775470097818 1.3225595770123222 1.3773726886782398 0.9683231199494964 0.9753513444107504 0.9836077935125758 1.0 10.697941312043973 -5.182031875770513 18.82840365466626 1.013278562686744 1.1164464134190226 0.018771415438358363 0.16532265107506125 24117.751000962387 5711355.821583363 0.023877243603488137 132.58698777268842 6.576095692289026e-06 5.182031875770513 0.10316785073227863 LEEET(ph)EEDEEEKEQDEDEYKSEDLSVLEK ddPTM_A549_PD325901_60min_R1 1 LEEETEEDEEEKEQDEDEYKSEDLSVLEK 29 2 A0A6I8PRS5;Q8N954-2;Q8N954 A0A6I8PRS5 GPATCH11 G patch domain-containing protein 11 1 LEEET(1)EEDEEEKEQDEDEYKSEDLSVLEK 145.15 4.3172e-36 17562000.0 1738.0 2212.0 1271.7 1665.6 2442.1 1821.0 1806.0 2155.3 1832.1 1906.7 2231.3 True False 1914.4404805520237 2398.413003014676 1358.0052093533297 1768.4803291479434 2270.5753207876364 1806.170379750625 1874.7283182811195 2112.3108506998597 1755.1032082993697 1786.3106366005422 1956.864245376084 0.9783205376027978 1.2256409756997386 0.6939700659165239 0.9037317398622429 1.160313152101801 0.9229921717965175 0.9580267628226918 1.0794365810970707 0.8968957414631803 0.9128434130376972 1.0 10.934327959218507 LEEFS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LEEFSPR 7 0 Q9UGU0-2;Q9UGU0;I3L1M7 Q9UGU0-2 TCF20 Transcription factor 20 1 LEEFS(1)PR;LEEFS(1)PR 61.678999999999995 0.027851 8992900.0 651.4200000000001 562.15 744.22 729.3199999999999 912.37 706.49 735.13 705.56 939.1499999999999 893.95 1011.1200000000001 True False 761.3637703100884 590.7610338632148 849.7615867522708 908.0034327404193 778.1615816092304 781.2503028698931 868.6936053231508 805.5752906868784 726.4340245143766 692.006074124761 760.0309985076487 1.0017535755844915 0.7772854462820565 1.1180617480350297 1.1946926303312895 1.023855057408424 1.0279189985723072 1.142971282788288 1.0599242560746307 0.9557952582733583 0.9104971711463645 1.0 9.569914451069431 -8.75737760764529 24.92338422120834 0.9791255382506968 1.0441391404238622 0.11425323342675686 0.10336156232830326 210.69901706704667 1292864.5535336179 0.017932046907167525 0.01997266020633486 1.7483259041254366e-09 8.75737760764529 0.06501360217316543 LEEFS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LEEFSPR 7 0 Q9UGU0-2;Q9UGU0;I3L1M7 Q9UGU0-2 TCF20 Transcription factor 20 1 LEEFS(1)PR;LEEFS(1)PR 79.906 0.016109000000000002 13134900.0 1759.14 1542.08 1856.81 2252.8 1946.69 2146.3900000000003 2064.1 1856.0700000000002 1963.62 1994.8600000000001 2212.2 True False 1937.7265977895781 1672.0364935302296 1982.8242925055888 2391.950339519984 1809.9612101159194 2128.910511473338 2142.650455018859 1819.0492277912535 1881.0958800724893 1868.9041991550625 1940.1134242912096 0.9987697489890296 0.8618240936820909 1.0220146243408335 1.2328920101121645 0.9329151519979615 1.0973123966971685 1.1043944277647804 0.9375994233202191 0.9695803639726469 0.9632963597671295 1.0 10.921925283403887 -8.280259552430143 24.664554811265486 0.9816311241998945 1.0345125335248666 0.1063797173383465 0.09170921668809735 1554.1003739088064 2036703.3236522363 0.015076863950787485 0.018243821400061914 5.244939072078636e-09 8.280259552430143 0.052881409324972095 LEEGVAS(ph)DEEAEEAQPGS(ph)GPSPEPEGSPPAHPQ ddPTM_A549_PD325901_60min_R1 2 LEEGVASDEEAEEAQPGSGPSPEPEGSPPAHPQ 33 0 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;A1L2Z2 Q7Z406 MYH14 Myosin-14 2 LEEGVAS(0.994)DEEAEEAQPGS(0.507)GPS(0.429)PEPEGS(0.07)PPAHPQ;LEEGVAS(1)DEEAEEAQPGS(0.566)GPS(0.431)PEPEGS(0.003)PPAHPQ 86.146 3.5898000000000006e-07 4434900.0 202.17 487.53000000000003 459.72 173.05 332.56 0.0 361.5 322.26 215.24 372.64 662.96 True False 222.6941495703122 528.6158640866838 490.9193637209352 183.73890547493497 309.20213286971733 0.0 375.2570803203902 315.8322714919205 206.19421131726241 349.11144680485967 581.4201228496973 0.38301761638181336 0.9091805448627998 0.8443453269467293 0.3160174515019894 0.5318050076324053 0.0 0.6454146761917247 0.5432083601509027 0.3546389318392504 0.6004461027144538 1.0 9.183437193538314 -10.867322634222466 1.0571768277887357 1.0066589467088582 0.5001573303110382 0.09481771797965655 0.26492653430968593 0.4755806356411199 0.9230668136641782 0.18238894075989315 0.04186134591604489 1.3573047401006675e-11 10.867322634222466 -0.5065016163978201 LEEGVAS(ph)DEEAEEAQPGSGPSPEPEGS(ph)PPAHPQ ddPTM_A549_PD325901_60min_R1 1 LEEGVASDEEAEEAQPGSGPSPEPEGSPPAHPQ 33 0 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;A1L2Z2 Q7Z406 MYH14 Myosin-14 2 LEEGVAS(1)DEEAEEAQPGS(0.002)GPS(0.004)PEPEGS(0.995)PPAHPQ 77.126 5.3779e-06 4881100.0 0.0 209.26 0.0 158.01 311.66 206.71 0.0 265.59 148.79 203.49 285.19 True False 0.0 226.89507459803386 0.0 167.7699188332532 289.7700767686314 205.02662229448202 0.0 260.29259909867574 142.53687373116279 190.64160667217934 250.11343796836175 0.0 0.9071686689090855 0.0 0.6707753097795384 1.1585546107494074 0.8197345330978058 0.0 1.0406981776469029 0.5698889067655496 0.7622205676781535 1.0 7.966438761765824 -14.999999999999917 0.06413650075344592 2.404744577851783 2.801288984446982e-13 0.13698166196026085 0.3872302959087574 331.88330956532633 1.6027562574246785 73.68502010607219 11.66053292729681 1.0000000000001922e-15 14.999999999999917 -2.4047445778515026 LEEGVAS(ph)DEEAEEAQPGSGPSPEPEGSPPAHPQ ddPTM_A549_MK2206_60min_R1 2 LEEGVASDEEAEEAQPGSGPSPEPEGSPPAHPQ 33 0 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;A1L2Z2 Q7Z406 MYH14 Myosin-14 1 LEEGVAS(1)DEEAEEAQPGSGPSPEPEGSPPAHPQ;LEEGVAS(1)DEEAEEAQPGSGPSPEPEGSPPAHPQ 75.515 5.5266e-06 19325400.0 0.0 0.0 0.0 0.0 467.85 313.55 0.0 202.39 403.02 471.25 501.84 True False 0.0 0.0 0.0 0.0 399.02988475714744 346.729652882355 0.0 231.07940229338 311.7366134906928 364.79429770266097 377.21927792060154 0.0 0.0 0.0 0.0 1.0578194384888693 0.9191726753565758 0.0 0.6125864074794672 0.8264068984202557 0.9670616510205085 1.0 8.559259597096757 -7.468298987088733 0.40475470110581957 0.9737504795495292 8.847196118954868e-18 0.5013659794791286 0.32450257340002125 0.9183267482332883 0.29168280852848527 0.11922580117342964 0.342904312567899 3.40173918643389e-08 7.468298987088733 -0.9737504795495292 LEEGVAS(ph)DEEAEEAQPGSGPSPEPEGSPPAHPQ ddPTM_A549_PD325901_60min_R1 2 LEEGVASDEEAEEAQPGSGPSPEPEGSPPAHPQ 33 0 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;A1L2Z2 Q7Z406 MYH14 Myosin-14 1 LEEGVAS(1)DEEAEEAQPGSGPSPEPEGSPPAHPQ;LEEGVAS(1)DEEAEEAQPGSGPSPEPEGSPPAHPQ 88.087 2.2328e-09 29239000.0 407.94 0.0 0.0 260.51 255.12 202.72 196.81 319.23 193.97 396.09000000000003 0.0 True False 449.35376849044457 0.0 0.0 276.6011110388631 237.2012513162204 201.06911553160182 204.2997122485643 312.86270721890975 185.818115448845 371.0808098028578 0.0 0.0 LEEKQKS(ph)DAEEDGGTVSQEEEDR ddPTM_A549_MK2206_60min_R1 1 LEEKQKSDAEEDGGTVSQEEEDR 23 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 LEEKQKS(1)DAEEDGGTVSQEEEDR 136.63 4.4508999999999994e-23 12855000.0 2886.6 2753.0 2467.9 2051.6 3227.7 2458.9 2249.8 2383.0 3385.8 3232.4 3285.6 True False 3373.787509405762 2893.1159409862667 2817.885329534183 2554.242092099824 2752.909605708336 2719.099165914281 2658.5595381171024 2720.7975476314273 2618.9217060115834 2502.1985950007033 2469.694842053099 1.3660746469394072 1.1714467276374803 1.1409852268192078 1.0342338853396313 1.1146760153654434 1.1009858868449707 1.0764728876005576 1.1016735757400629 1.0604231994242777 1.0131610401391062 1.0 11.270117076652438 -2.0000000000000004 0.4942724872987068 1.039672134932857 10.506263223929441 0.8433101799908896 0.03796799742254368 26.31133874712312 0.25366269770155425 0.007980207083848407 259.707125045758 0.00999999999999999 2.0000000000000004 9.466591088996584 LEEKQKS(ph)DAEEDGGTVSQEEEDR ddPTM_A549_PD325901_60min_R1 2 LEEKQKSDAEEDGGTVSQEEEDR 23 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 LEEKQKS(1)DAEEDGGTVSQEEEDR;LEEKQKS(1)DAEEDGGTVSQEEEDR 190.6 9.5672e-51 31725000.0 5396.8 5406.5 5455.700000000001 5938.5 5747.6 5774.7 5602.799999999999 6114.299999999999 6337.5 5875.9 6253.1 True False 5944.679163085822 5862.124729113404 5825.956609789228 6305.307657687959 5343.9084041435735 5727.672757795686 5816.017619969801 5992.345489924438 6071.156914249908 5504.89467121263 5484.0083416668285 1.0840025748901352 1.0689489081505754 1.0623537104282499 1.1497625942289327 0.974453004300013 1.044431809900347 1.060541351802915 1.0926944520480257 1.1070655870674004 1.0038085882158694 1.0 12.421015050248995 -10.976522243447262 1.2589673259414103 1.0001777173355295 1.0738192287056758 0.2993458693053397 0.040935930977818655 0.46061842156595595 1.3037675063435603 0.028830987790434547 0.006712271937112372 1.0555474394042613e-11 10.976522243447262 0.0736415113701463 LEENLQETHS(ph)AVL ddPTM_A549_MK2206_60min_R1 2 LEENLQETHSAVL 13 0 Q8IXU6-3;Q8IXU6 Q8IXU6-3 SLC35F2 Solute carrier family 35 member F2 1 LEENLQET(0.009)HS(0.991)AVL;LEENLQET(0.001)HS(0.999)AVL 131.66 3.7654e-08 22141000.0 1982.08 2124.99 2085.31 1891.0500000000002 2943.12 2392.7 2111.64 1986.37 3799.5 3393.5 3221.4 True False 2316.6066467965684 2233.1429144338576 2381.0383145714686 2354.357334892462 2510.190946727488 2645.8939258542837 2495.2976544891094 2267.944030502997 2938.9193165547304 2626.905993111894 2421.437473882961 0.9567071922289662 0.9222385209281664 0.98331604274435 0.972297389582011 1.0366532168605633 1.0926955390722477 1.030502617310084 0.9366106104181887 1.2137085298518766 1.084853943760707 1.0 11.241648034955077 -6.7966247874757615 0.7500354000323876 1.0887359684466877 0.9324487204949976 0.3001479312306501 0.06764967071276731 0.7590862368232346 0.7565023409998387 0.01596405198050279 0.06457207231766975 1.5972585167873015e-07 6.7966247874757615 -0.15628724795169013 LEENLQETHS(ph)AVL ddPTM_A549_PD325901_60min_R1 2 LEENLQETHSAVL 13 0 Q8IXU6-3;Q8IXU6 Q8IXU6-3 SLC35F2 Solute carrier family 35 member F2 1 LEENLQET(0.005)HS(0.995)AVL;LEENLQETHS(1)AVL 128.22 5.2219e-08 46166000.0 8424.9 8082.0 8277.2 8214.3 10359.5 7664.2 8522.6 8655.2 8992.7 9484.0 10769.7 True False 9280.189645916422 8763.098503781472 8838.940566847043 8721.678654971147 9631.88445833484 7601.785296257409 8846.932206745669 8482.565246126958 8614.768091956634 8885.17862145044 9445.0951747532 0.9825406175601521 0.9277935628648074 0.9358233456951909 0.9234082339672183 1.0197763262440096 0.8048394595934861 0.9366694610334447 0.8980920879231487 0.9120890719009338 0.9407188024108617 1.0 13.205349618856744 -10.736158873013833 0.9998369419755423 0.9998003380588882 0.9252416584999144 0.05223987437844879 0.05309776424643595 0.6149463423397917 1.096664533298278 0.032123355723026624 0.008358462206068042 1.835866626272324e-11 10.736158873013833 -0.07455867955897388 LEEPPELNRQS(ph)PNPR ddPTM_A549_MK2206_60min_R1 4 LEEPPELNRQSPNPR 15 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR 226.67 3.1043999999999997e-54 1929907000.0 17042.399999999998 18874.9 17953.0 16553.9 23976.2 18500.899999999998 16655.1 16531.5 25171.0 25022.699999999997 25349.5 True False 19918.740473323895 19835.551788783774 20499.005357237802 20609.6062431328 20449.332741080085 20458.652958096493 19681.116082893637 18874.89075059544 19469.808689827383 19370.0546909801 19054.519539391607 1.0453551679508724 1.040989343645088 1.0758080420164882 1.0816124857163858 1.0732011740734246 1.0736903082652967 1.0328844053090218 0.9905729037971901 1.0217947846744309 1.0165595963170935 1.0 14.217845610534692 -7.952641785200577 4.151871585764705 1.0091181646111091 1.0654123385765035 0.78810432104683 0.014045625840770994 0.08014073544107686 2.962048787386079 0.0024735478768407107 0.0034217409516895322 1.1152140052199019e-08 7.952641785200577 0.05629417396539438 LEEPPELNRQS(ph)PNPR ddPTM_A549_PD325901_60min_R1 6 LEEPPELNRQSPNPR 15 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR 180.3 1.8312999999999998e-60 2476693000.0 24089.4 25817.3 26150.5 26616.4 33487.4 28627.7 28196.6 29060.8 30893.800000000003 30655.700000000004 32025.0 True False 26534.93815432102 27993.014476822238 27925.230185731118 28260.434577769774 31135.36054925838 28394.565502683676 29269.637042771563 28481.159546243438 29595.441022083458 28720.09387026552 28086.128023201334 0.9447702485868144 0.9966847140231584 0.994271270239269 1.0062061439876813 1.1085672088206016 1.0109818441056577 1.0421385610217455 1.0140650047139206 1.053738735280111 1.022572205273026 1.0 14.777570126592646 -5.458867343268478 1.1598846363864979 1.0296812388084502 0.9279582466707643 0.4392227213231753 0.029430027899681077 0.9199266155091446 1.270382770952615 0.004629048768416119 0.1032260135181938 3.4764233376420477e-06 5.458867343268478 -0.10172299213768587 LEEPTPAPSTSYS(ph)PQADSLR ddPTM_A549_MK2206_60min_R1 2 LEEPTPAPSTSYSPQADSLR 20 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 LEEPTPAPSTS(0.003)YS(0.997)PQADSLR;LEEPTPAPSTS(0.004)YS(0.992)PQADS(0.004)LR 241.32 1.9508999999999998e-85 184055000.0 2269.5 2137.9 1925.87 2127.2 2672.2 2732.8999999999996 2169.0 2400.8 3201.4 3456.8 2864.7 True False 2652.536116052234 2246.7099782907903 2198.9873250901574 2648.364095493635 2279.122919841934 3022.093664047801 2563.0792240092405 2741.1207521416436 2476.28801158529 2675.9064791481337 2153.31592830214 1.2318378744096887 1.0433722004101322 1.0212097984265731 1.2299003879016646 1.0584247717142887 1.4034604139257356 1.1902940903010888 1.272976582819865 1.1499882479101935 1.2426910719311166 1.0 11.072344287751616 -10.189353608305801 0.9202078680430251 1.011724454876244 1.1752165661248442 0.0 0.1265549559923491 0.5301224431545891 0.8870304870153645 0.047517268215462934 0.020495255017352675 6.466159181308723e-11 10.189353608305801 0.16349211124860008 LEEPTPAPSTSYS(ph)PQADSLR ddPTM_A549_PD325901_60min_R1 2 LEEPTPAPSTSYSPQADSLR 20 0 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 LEEPTPAPSTSYS(1)PQADSLR;LEEPTPAPSTSYS(1)PQADSLR 391.64 0.0 258560000.0 8109.2 8331.8 8738.5 8479.5 8082.1 8186.3 8532.7 9086.3 8979.9 9410.6 9755.0 True False 8932.440014322481 9033.95002645464 9331.547158869293 9003.25945665825 7514.441177731363 8119.633486959111 8857.416567772594 8905.066618435547 8602.506031443432 8816.413109976953 8555.196842039933 1.0440952066034048 1.05596051069943 1.0907460495840846 1.0523731508334855 0.87834813347668 0.949087862836717 1.035325864654284 1.0408955846201418 1.0055298773689254 1.0305330517532234 1.0 13.062585333972663 -6.549973094089385 24.998771574432176 0.9956766799755847 1.064290543801234 0.35657687929470716 0.04478351058234561 185.54168569893977 171190.70643107293 0.006424855627027323 0.01337467136257037 2.818557544370137e-07 6.549973094089385 0.06861386382564927 LEEVKT(ph)PK ddPTM_A549_MK2206_60min_R1 1 LEEVKTPK 8 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 LEEVKT(1)PK 48.44 0.014044 9172600.0 2283.8 2052.9 1983.0 2151.0 2934.8 2698.1 2062.0 2380.8 3101.4 2419.3 3047.5 True False 2669.249606450798 2157.3838413551425 2264.2192181475293 2677.995096562061 2503.094807706051 2983.61115114617 2436.638709039677 2718.285690894211 2398.9378519181055 1872.7784497231783 2290.721643278799 1.1652439807702681 0.941792228525503 0.9884305344523066 1.1690617689929983 1.0927101575393832 1.3024765186553227 1.0636991692941011 1.1866503723269592 1.047241099308955 0.8175495504737963 1.0 11.16158644506832 -8.960511301656492 7.725035104965119 1.0206210044092074 1.110173863920925 0.23801972094092028 0.11145581511343021 0.29637420367981043 46.66864774667189 0.016601088848730617 0.017406199478678743 1.0951880548889336e-09 8.960511301656492 0.08955285951171765 LEFGS(ph)PK ddPTM_A549_PD325901_60min_R1 1 LEFGSPK 7 0 Q8WYL5;Q8WYL5-4;Q8WYL5-2;Q8WYL5-5 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 LEFGS(1)PK 57.96 0.033905000000000005 2539500.0 1151.9 1139.6 1331.9 1039.3 1342.8 1287.2 1225.8 1241.8 1458.8 1318.0 1230.0 True False 1268.8400400160394 1235.6380914265483 1422.2907433653388 1103.4952005784442 1248.4863604085162 1276.7174699698 1272.4484897834973 1217.0313248267457 1397.4917091136515 1234.7812550687124 1078.7177976124158 1.1762483596955862 1.1454692730215934 1.318501230361983 1.0229693095088164 1.1573799590327132 1.1835509461284754 1.1795934883060946 1.1282203070353216 1.295511868077819 1.1446749629993316 1.0 10.075101776702876 -11.04957835615058 1.3593504288633094 1.000234967237458 1.189434082066722 0.10440437548144965 0.08584988044094591 0.32363257883067065 1.068571937032229 0.055597093124570396 0.012461612169563919 8.92116647860853e-12 11.04957835615058 0.189199114829264 LEGAEINKS(ph)LLALK ddPTM_A549_MK2206_60min_R1 2 LEGAEINKSLLALK 14 1 O00139-1;O00139-5;O00139;O00139-4;O00139-2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 LEGAEINKS(1)LLALK;LEGAEINKS(1)LLALK 106.16 5.5438e-06 6993300.0 3341.1000000000004 4089.5 3576.8 3643.0 5348.9 4005.0 4031.3 3758.7000000000003 5202.8 5738.2 5475.3 True False 3904.9959979476153 4297.638082333214 4084.0440239385166 4535.535163540485 4562.083895644985 4428.806441696161 4763.735028007588 4291.507235535985 4024.3741071643494 4441.936634647018 4115.631899407519 0.9488205197626575 1.0442231441912713 0.9923249026538186 1.1020264383200584 1.1084771444943209 1.0760939146024515 1.1574735409873194 1.0427334952267682 0.9778265417137264 1.0792842370782658 1.0 12.006898238553983 -8.64414988717801 5.176548600828013 0.9896780089283767 1.0643705630784965 0.026010624986026798 0.05990968446801549 0.2045883472405003 8.546650349694268 0.00928714198088568 0.010520452152453797 2.269081593178745e-09 8.64414988717801 0.07469255415011988 LEGAEINKS(ph)LLALK ddPTM_A549_PD325901_60min_R1 2 LEGAEINKSLLALK 14 1 O00139-1;O00139-5;O00139;O00139-4;O00139-2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 LEGAEINKS(1)LLALK;LEGAEINKS(1)LLALK 117.26 9.347399999999999e-07 14143100.0 5825.5 5578.8 6403.2 6100.9 6997.200000000001 7023.799999999999 6711.700000000001 6955.0 6156.3 6693.6 6844.1 True False 6416.900471493561 6048.945054800303 6837.75965756959 6477.7387368507925 6505.740811029547 6966.600501533468 6967.117416283164 6816.277068908047 5897.5721201099395 6270.9649536630795 6002.3190883245015 1.0690702005455672 1.0077679919693867 1.13918629732134 1.079205993805138 1.0838712029962358 1.1606514747082761 1.1607375938802311 1.1356072492325222 0.9825489170646872 1.044757011645905 1.0 12.551304300517137 -8.768214722228148 24.998204095143464 0.9917592021531431 1.1046571538957277 0.45049312274433173 0.04585136511172819 83.08466513751824 306546.7866186485 0.007880660244905295 0.008481895988982364 1.705239082717944e-09 8.768214722228148 0.11289795174258466 LEGDS(ph)DVDSELEDRVDGVK ddPTM_A549_MK2206_60min_R1 2 LEGDSDVDSELEDRVDGVK 19 1 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 1 LEGDS(0.999)DVDS(0.001)ELEDRVDGVK;LEGDS(0.999)DVDS(0.001)ELEDRVDGVK 140.17 1.7938e-18 8354500.0 3066.0 4323.4 4082.8 2795.8 4603.4 3631.6000000000004 4119.0 3657.3999999999996 5213.3 5373.9 5188.5 True False 3583.4658434968696 4543.442593265539 4661.8024326034965 3480.77112550823 3926.245958087105 4015.8935015390216 4867.368982800397 4175.847650317745 4032.4958739294034 4159.932257664361 3900.0522546848374 0.9188250847645243 1.1649696713185946 1.1953179414464579 0.8924934586009824 1.0067162442171904 1.0297024858359354 1.2480266070675323 1.0707158206153817 1.033959447360089 1.06663500538162 1.0 11.929277738654829 -9.04214879121289 2.506174641831214 1.012875152186114 1.070016339071115 0.00930573203129037 0.10429231205792197 0.6433363003429061 8.249235259152428 0.019728762663218803 0.019547108284131913 9.075095601169213e-10 9.04214879121289 0.05714118688500114 LEGDS(ph)DVDSELEDRVDGVK ddPTM_A549_PD325901_60min_R1 2 LEGDSDVDSELEDRVDGVK 19 1 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 1 LEGDS(0.999)DVDS(0.001)ELEDRVDGVK;LEGDS(1)DVDSELEDRVDGVK 133.95 3.0729000000000003e-17 16625200.0 3496.0 4115.6 4426.0 4306.799999999999 5221.9 3836.5 4183.799999999999 3927.8 4597.4 4872.8 5058.4 True False 3850.911346380827 4462.436055699456 4726.374975700116 4572.821254547524 4855.131758577029 3805.2568159875186 4343.016798463203 3849.4569477005098 4404.187265889159 4565.1305764027475 4436.24886783955 0.8680557518533035 1.0059030024329223 1.065398970279559 1.030785555719845 1.0944227664444521 0.8577645054076228 0.9789840308436637 0.8677279076038834 0.9927728125933554 1.029051956371862 1.0 12.115124585762908 LEGDSDDLLEDS(ph)DSEEHSR ddPTM_A549_MK2206_60min_R1 4 LEGDSDDLLEDSDSEEHSR 19 0 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 LEGDSDDLLEDS(0.984)DS(0.016)EEHSR;LEGDSDDLLEDS(0.999)DS(0.001)EEHSR;LEGDSDDLLEDS(0.997)DS(0.003)EEHSR;LEGDSDDLLEDS(0.849)DS(0.151)EEHSR 178.84 2.7298e-35 151872800.0 1874.88 2394.6400000000003 2093.75 2070.88 2790.95 2257.58 2155.47 1946.06 2830.1200000000003 2826.7000000000003 2328.34 True False 2191.313907584936 2516.5169476655865 2390.6752334827966 2578.245692965337 2380.4049521491092 2496.4756171396803 2547.0909981443983 2221.9199645587996 2189.1023387729624 2188.1465067715894 1750.1489190850727 1.252072828597061 1.4378873250289745 1.3659838928064318 1.473157892365622 1.3601156599825324 1.42643611061667 1.4553567244300238 1.2695605158676184 1.250809182522229 1.2502630392821024 1.0 10.773261969968127 -9.651083106044954 0.5501835862734644 1.0050209587085253 1.4029332887291353 0.47766995725486805 0.09495827502283616 0.22077473931024105 0.14485097706328565 0.03725015975580155 0.017724478471794727 2.2331448501557687e-10 9.651083106044954 0.39791233002061 LEGDSDDLLEDS(ph)DSEEHSR ddPTM_A549_PD325901_60min_R1 5 LEGDSDDLLEDSDSEEHSR 19 0 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 LEGDSDDLLEDS(0.999)DS(0.001)EEHSR;LEGDSDDLLEDS(0.972)DS(0.028)EEHSR;LEGDSDDLLEDS(0.983)DS(0.017)EEHSR;LEGDSDDLLEDS(0.977)DS(0.023)EEHSR;LEGDSDDLLEDS(0.999)DS(0.001)EEHSR 314.29 2.3293999999999992e-163 306739900.0 3571.3500000000004 3285.0 3280.12 4067.3199999999997 5115.24 3468.61 4314.620000000001 4089.4399999999996 4949.82 1051.3700000000001 1216.93 True False 3933.910822911086 3561.8384787085015 3502.728668163913 4318.549118846069 4755.963189020004 3440.362790173981 4478.81522515066 4007.872911096382 4741.796278862719 984.9863187720738 1067.2553247548597 3.686007210893677 3.3373817830579844 3.2819969007589282 4.046406720751669 4.4562562291384324 3.2235611389094787 4.196573323426059 3.7553084235180174 4.442982076432248 0.9229153473638725 1.0 10.059689645165902 -10.804287325167428 0.955179283159578 0.9301168027174954 3.8456056187945187 0.8684439848276604 0.42788308061859004 0.17061611930440776 0.2654172843892261 0.3523929705724308 0.07983366256053576 1.5693242105890786e-11 10.804287325167428 2.915488816077023 LEGEVT(ph)PNSLSTSYK ddPTM_A549_MK2206_60min_R1 2 LEGEVTPNSLSTSYK 15 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LEGEVT(0.924)PNS(0.067)LS(0.008)T(0.001)SYK;LEGEVT(0.994)PNS(0.006)LSTSYK 121.99 4.7788e-07 8023200.0 3325.2 3917.5 3469.6 3486.8 4819.0 3922.9 3474.4 3500.7 5345.8 5189.1 5249.299999999999 True False 3886.412466665294 4116.884017004612 3961.6414519841983 4341.066156528402 4110.131483690698 4338.018674189728 4105.653506637947 3996.9349454441185 4134.984835488426 4016.8787060135332 3945.7539366902056 0.9849606764696816 1.0433706924101696 1.0040264840506805 1.1001867390062832 1.0416593506939198 1.0994143942560604 1.0405244656695114 1.0129711607908436 1.0479581093586774 1.0180256474338054 1.0 11.946085274837712 -10.791845342135396 0.6742406011608376 0.9945179120049248 1.0440978696017735 0.11223148490827062 0.03381380529195861 1.3565104063278548 0.8912041204611577 0.0398722932709564 0.006537961545123301 1.6149335530991044e-11 10.791845342135396 0.049579957596848745 LEGGRQDS(ph)EDEEER ddPTM_A549_MK2206_60min_R1 4 LEGGRQDSEDEEER 14 1 A0A3B3ISZ4;Q9BYE7-3;Q9BYE7 A0A3B3ISZ4 PCGF6 Polycomb group RING finger protein 6 1 LEGGRQDS(1)EDEEER;LEGGRQDS(1)EDEEER;LEGGRQDS(1)EDEEER;LEGGRQDS(1)EDEEER 151.72 9.6475e-14 256940000.0 2826.28 2913.8 2643.3900000000003 2221.54 2678.8599999999997 2195.56 2617.2599999999998 2461.65 3270.46 3808.42 3450.8999999999996 True False 3303.2869680881704 3062.099974153938 3018.262450357536 2765.817399728719 2284.803242664382 2427.8927019052235 3092.7822636378164 2810.5964259869497 2529.7060318514505 2948.0952769374367 2593.9462900051876 1.2734600484274345 1.180479328331742 1.1635793932924878 1.0662585460561667 0.8808213383091339 0.9359841841213944 1.1923077496071175 1.0835214425281445 0.9752345457570717 1.1365290362012626 1.0 11.34093289226042 -6.207962559147896 2.220016848117473 1.0004681775635815 1.223043763832795 0.41339234383615986 0.08893014272369679 0.18084914508744784 1.713843329387769 0.011768505653074449 0.0383232218797782 6.194944798571581e-07 6.207962559147896 0.22257558626921337 LEGGRQDS(ph)EDEEER ddPTM_A549_PD325901_60min_R1 4 LEGGRQDSEDEEER 14 1 A0A3B3ISZ4;Q9BYE7-3;Q9BYE7 A0A3B3ISZ4 PCGF6 Polycomb group RING finger protein 6 1 LEGGRQDS(1)EDEEER;LEGGRQDS(1)EDEEER;LEGGRQDS(1)EDEEER;LEGGRQDS(1)EDEEER 179.79 1.3337000000000002e-23 301956000.0 6059.11 5221.7300000000005 4636.94 5118.9 5930.3099999999995 4578.45 5265.99 4634.58 5296.65 5515.08 5199.25 True False 6674.2263867189695 5661.783512763029 4951.630632585381 5435.082827134611 5513.785484058856 4541.164621180259 5466.390131110296 4542.139666142325 5074.050220096536 5166.856907590556 4559.775210761264 1.463718292728008 1.2416804011305158 1.0859374429027382 1.1919628876238424 1.2092230930696073 0.9959185291553225 1.198828862924949 0.9961323653461428 1.112785167155074 1.1331385142400339 1.0 12.154746988369293 -2.0000000000000004 0.4239234650665313 1.0543635355283922 8.177095000929153 0.6387645439955147 0.07901718983394473 28.27463969131911 0.3164965593278977 0.015891395323137592 173.16503682027036 0.00999999999999999 2.0000000000000004 7.122731465400761 LEGNSPQGS(ph)NQGVK ddPTM_A549_PD325901_60min_R1 2 LEGNSPQGSNQGVK 14 0 P61006 P61006 RAB8A Ras-related protein Rab-8A 1 LEGNSPQGS(1)NQGVK;LEGNS(0.016)PQGS(0.984)NQGVK 147.7 3.2117e-13 17980500.0 9268.2 9307.400000000001 9149.2 10324.2 10950.3 10036.8 9473.2 9548.400000000001 10135.7 10657.400000000001 11010.1 True False 10209.10084111177 10091.767262323145 9770.119730609022 10961.90238604059 10181.188704484197 9955.063628490436 9833.707809933943 9357.949671425105 9709.731776846209 9984.489945196736 9655.927498774363 1.0572884730552938 1.0451370169881768 1.0118261277178349 1.1352511074085836 1.0543977992561053 1.0309795335304706 1.0184115209214388 0.9691404241190626 1.0055721501718686 1.0340270208598892 1.0 13.237199128365692 -7.59944002334368 2.1932460795410385 1.0003017820954807 1.0607943245046378 0.42031260816287563 0.031000205500802295 0.1996950456931507 1.947356565836782 0.004529274894118117 0.007222163934408586 2.515127331504377e-08 7.59944002334368 0.060492542409157135 LEGPGEQETKLDLIS(ph)KGEEPR ddPTM_A549_MK2206_60min_R1 2 LEGPGEQETKLDLISKGEEPR 21 2 Q99808;Q99808-2 Q99808 SLC29A1 Equilibrative nucleoside transporter 1 1 LEGPGEQET(0.001)KLDLIS(0.999)KGEEPR;LEGPGEQETKLDLIS(1)KGEEPR 132.24 3.0826999999999998e-18 21677100.0 2453.7 3180.3 3403.2 3313.8999999999996 4523.6 2454.6 3022.3 2731.3 4643.9 4402.1 5120.700000000001 True False 2867.8245727946082 3342.163685840403 3885.824933534882 4125.805648766623 3858.184432376686 2714.3441427683874 3571.412788715139 3118.470139255441 3592.064064784446 3407.6625526087723 3849.088865869647 0.7450658253759657 0.8682999541724762 1.0095440944455656 1.0718915027789193 1.0023630440408093 0.7051913419918197 0.9278592709000053 0.810183980657684 0.9332245084377573 0.8853166739861329 1.0 11.910301264428519 -9.718663594158295 1.1860902179749286 0.9870046407402251 0.9011334786806261 0.0 0.11099814093282999 0.7424584085922338 2.1317237229840043 0.031142119436958954 0.02116625059864551 1.9113332098890403e-10 9.718663594158295 -0.085871162059599 LEGPGEQETKLDLIS(ph)KGEEPR ddPTM_A549_PD325901_60min_R1 1 LEGPGEQETKLDLISKGEEPR 21 2 Q99808;Q99808-2 Q99808 SLC29A1 Equilibrative nucleoside transporter 1 1 LEGPGEQET(0.028)KLDLIS(0.972)KGEEPR 90.37 5.5383e-07 12713000.0 1936.1 2251.5 2157.0 2300.2 2565.4 2635.2 2351.9 2534.7 2440.1 2832.4 2380.2 True False 2132.651446718512 2441.241806639938 2303.3869910947014 2442.2781298667733 2385.215154149543 2613.7398048977766 2441.4028415090615 2484.1434200663152 2337.5510826763257 2653.5617806195924 2087.450489330952 1.021653666814415 1.1694848903565513 1.1034450890535654 1.1699813443956444 1.1426451388142995 1.252120621905387 1.1695620346385098 1.1900370489086458 1.1198115091225627 1.2711974699194346 1.0 11.027526264455348 -10.034635407201396 0.8110076333209998 1.0089739333434535 1.1539581408330453 0.0 0.0954246676914284 0.3381651147468464 0.44718483292143324 0.024837910682381368 0.01109958000731446 9.233462565422057e-11 10.034635407201396 0.14498420748959173 LEGPVS(ph)PDVEPGKEETEESK ddPTM_A549_MK2206_60min_R1 3 LEGPVSPDVEPGKEETEESK 20 1 O14686;O14686-3;A0A3B3ISC8 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK 171.52 6.160199999999999e-35 99368100.0 8062.299999999999 8147.4 7112.9 6374.9 10728.9 8307.599999999999 7387.4 8233.6 10825.2 10442.7 11468.2 True False 9423.019135689767 8562.067859640947 8121.6161758757235 7936.750786180138 9150.69302248789 9186.704717861427 8729.594955945538 9400.738014342473 8373.30948429221 8083.686817229873 8620.32943378176 1.0931158963324983 0.9932413749859147 0.9421468446493871 0.9207015633390085 1.0615247471433882 1.0657022783677068 1.0126753302183074 1.0905311782520062 0.9713444884691392 0.9377468551899111 1.0 13.073527288941849 -5.259765269647132 22.840384150213186 0.9974539462599274 1.093116000112238 0.20397369373950258 0.05298253333431904 51.58528359197374 703561.5230015268 0.007014456312462469 0.061202386219126596 5.498379736243452e-06 5.259765269647132 0.09566205385231052 LEGPVS(ph)PDVEPGKEETEESK ddPTM_A549_PD325901_60min_R1 2 LEGPVSPDVEPGKEETEESK 20 1 O14686;O14686-3;A0A3B3ISC8 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LEGPVS(1)PDVEPGKEETEESK;LEGPVS(1)PDVEPGKEETEESK 258.9 1.8011999999999995e-98 134257000.0 12780.0 11262.4 12809.900000000001 11652.4 14862.5 10235.5 12639.099999999999 11891.400000000001 14533.400000000001 13194.5 14470.0 True False 14077.416191861255 12211.521973396233 13679.256846186383 12372.142283479527 13818.609272841502 10152.145481569212 13120.087866880898 11654.216698377171 13922.611739259903 12361.397018212536 12690.281732887528 1.1093068292864527 0.962273512159264 1.0779316908887746 0.974930465997179 1.0889127257931441 0.7999937034699077 1.0338689197797324 0.9183576017997032 1.0971081676759569 0.9740837341835626 1.0 13.631436477895361 -11.636455195671866 3.416386028401953 0.9991879044808937 1.024616707104178 0.0 0.08959149208242247 1.5896904741614337 34.214457139450346 0.08288831762841797 0.012328045525786728 2.309642722717261e-12 11.636455195671866 0.025428802623284397 LEGPVS(ph)PDVEPGKEETEESKK ddPTM_A549_MK2206_60min_R1 1 LEGPVSPDVEPGKEETEESKK 21 2 O14686;O14686-3;A0A3B3ISC8 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LEGPVS(1)PDVEPGKEETEESKK 135.54 1.8613000000000003e-18 15191000.0 2993.7 2940.7 2960.2 2790.1 4158.8 3041.0 3442.2 4100.1 4714.8 3999.2 3865.8 True False 3498.9633710621592 3090.3690692547484 3380.000872193804 3473.6746252523503 3547.0460291290483 3362.7966015475727 4067.603183441497 4681.301731029636 3646.905327988484 3095.7779424349737 2905.815169347723 1.204124545831861 1.0635119197717082 1.1631850875609968 1.195421739790868 1.2206715921044848 1.15726445268108 1.3998148355576807 1.6110115262700835 1.2550369226708646 1.065373315925628 1.0 11.504727224815971 -10.479576926336716 1.0750590233815065 1.0153109204169168 1.2491517099966425 0.26476126056020177 0.13937332693578236 0.4880565301457701 1.089729511005903 0.072827608732794 0.027126972193116838 3.3145385437753514e-11 10.479576926336716 0.23384078957972565 LEGPVS(ph)PDVEPGKEETEESKK ddPTM_A549_PD325901_60min_R1 1 LEGPVSPDVEPGKEETEESKK 21 2 O14686;O14686-3;A0A3B3ISC8 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 LEGPVS(1)PDVEPGKEETEESKK 116.35 2.804e-15 21813000.0 4097.5 3452.0 4287.1 4040.4 4927.5 4191.8 3689.0 4504.6 4880.7 5003.2 4565.6 True False 4513.475183579931 3742.912154795055 4578.048386426566 4289.966331585824 4581.409398952162 4157.663370586859 3829.3869136982594 4414.752219209661 4675.581152091445 4687.297098148545 4004.0601437229634 1.1272246224012297 0.9347792042191719 1.1433515536981695 1.0714040692698052 1.1441909548072824 1.0383618680415414 0.9563759724492317 1.1025689077449365 1.1677100203954738 1.1706360368978648 1.0 11.967247929265362 LEGQGDVPT(ph)PK ddPTM_A549_PD325901_60min_R1 2 LEGQGDVPTPK 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 LEGQGDVPT(1)PK;LEGQGDVPT(1)PK 94.09 0.00030585 33577000.0 23285.2 23580.0 21987.9 22091.7 25864.0 22570.0 21851.3 24193.4 25004.6 27640.0 27426.7 True False 25649.096362341763 25567.169354017213 23480.131117983874 23456.254135109037 24047.401865956115 22386.19740305964 22682.863178990156 23710.84365764487 23953.74361783879 25894.805682928083 24053.38977217599 1.0663401959257994 1.062934147584982 0.9761672404753845 0.9751745744478104 0.9997510576980381 0.9306878413018986 0.9430214782129709 0.9857589255495555 0.9958572926609927 1.0765553598970141 1.0 14.553952602563337 -5.755942810639235 24.596047615760277 0.986525140467387 1.0646372256478824 0.41675195650144525 0.03542201297206167 56.42892111251647 252497.98647674572 0.003576373493233514 0.013086292945615748 1.754111473943335e-06 5.755942810639235 0.0781120851804954 LEGS(ph)PVKDGLLK ddPTM_A549_PD325901_60min_R1 2 LEGSPVKDGLLK 12 1 R4GNA2;Q5W026;Q9BXX3 R4GNA2 ANKRD30A Ankyrin repeat domain-containing protein 30A 1 LEGS(1)PVKDGLLK;LEGS(1)PVKDGLLK 60.474 0.0024241999999999996 8206700.0 4093.1 3417.1 3339.8999999999996 3034.3999999999996 3751.9 3615.7 3849.6 3484.8 3938.4 3946.8 4257.1 True False 4508.628498819039 3705.071009313495 3566.565698450252 3221.8279963775917 3488.379487352334 3586.254937981515 3996.0986345819488 3415.292930227287 3772.8827441549247 3697.598374434897 3733.5036879803397 1.2076132436494278 0.9923844514314044 0.9552865073985253 0.862950264854421 0.9343447278712594 0.9605601702034263 1.0703347227021653 0.9147688647589924 1.010547480186336 0.9903829441334057 1.0 11.866314440806871 LEGTEHRQDNDT(ph)GNEEQEEEEDDEEEMEEK ddPTM_A549_MK2206_60min_R1 2 LEGTEHRQDNDTGNEEQEEEEDDEEEMEEK 30 1 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 LEGT(0.032)EHRQDNDT(0.968)GNEEQEEEEDDEEEMEEK;LEGT(0.008)EHRQDNDT(0.992)GNEEQEEEEDDEEEMEEK 79.829 7.5065e-06 10469800.0 898.64 972.07 808.04 839.8199999999999 1173.94 882.9300000000001 931.31 478.01 1077.28 933.24 1340.48 True False 1050.3084623613922 1021.5442109533318 922.6322224064185 1045.5759377009517 1001.2549811089142 976.3610665584993 1100.5169719280987 545.7693813442293 833.2778000626607 722.4204358366713 1007.6018206340818 1.0423844427955036 1.0138372023886142 0.915671452266539 1.0376876225203453 0.993701044008462 0.9689949408230298 1.0922141558215381 0.5416518412012968 0.8269911615863106 0.7169701573008807 1.0 9.976709918652544 LEGTEHRQDNDT(ph)GNEEQEEEEDDEEEMEEK ddPTM_A549_PD325901_60min_R1 4 LEGTEHRQDNDTGNEEQEEEEDDEEEMEEK 30 1 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 LEGT(0.002)EHRQDNDT(0.998)GNEEQEEEEDDEEEMEEK;LEGT(0.008)EHRQDNDT(0.992)GNEEQEEEEDDEEEMEEK;LEGT(0.145)EHRQDNDT(0.855)GNEEQEEEEDDEEEMEEK;LEGTEHRQDNDT(1)GNEEQEEEEDDEEEMEEK 97.07700000000001 6.542100000000001e-10 20918800.0 2382.46 2080.26 2117.7000000000003 1973.11 2174.94 2420.47 2274.59 2405.18 2220.16 2630.3500000000004 2940.88 True False 2624.325585325648 2255.570810873106 2261.4198567646035 2094.984523442061 2022.1797175356705 2400.7584948242697 2361.1507671534077 2357.2067980727916 2126.854396014373 2464.26925210166 2579.1704037743116 1.0175076379153765 0.8745334575692805 0.8768012588293052 0.8122706899770167 0.784042696278016 0.9308258544340626 0.9154690840504924 0.9139399221638468 0.824627327028091 0.9554503450006611 1.0 11.33269137867278 -10.96015119076826 1.183608211828547 1.0010448037594264 0.8758159185336637 0.23970396809047312 0.062366262563653296 0.44584982395090095 1.0950910982344089 0.04606350340095695 0.010322979313416662 1.096096546052976e-11 10.96015119076826 -0.1252288852257627 LEGVDGGQS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LEGVDGGQSPR 11 0 O00418;H3BRH4 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 LEGVDGGQS(1)PR;LEGVDGGQS(1)PR 196.75 7.329e-24 90737000.0 9790.9 10272.7 8688.9 7735.8 12371.0 10034.1 9512.6 9842.0 14003.0 12752.900000000001 12478.2 True False 11443.364555477337 10795.536551750683 9921.116674010107 9631.071347273259 10551.242287764606 11095.901801903481 11240.916286911164 11237.1336398609 10831.34285819605 9872.011032726286 9379.518559199843 1.2200375193301563 1.1509691551451697 1.0577426348049646 1.0268193710035023 1.1249236537215959 1.182992680474003 1.1984534404365115 1.1980501524610798 1.1547866545423267 1.0525072230965826 1.0 13.195298157287558 -10.617900575128376 0.9333351397577988 1.001350753972411 1.1431044694560604 0.37533267017084393 0.05823865859263136 0.43675833509118317 0.6881789005331875 0.04036081450762051 0.01139539524888675 2.4104572016811692e-11 10.617900575128376 0.14175371548364946 LEGVDGGQS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LEGVDGGQSPR 11 0 O00418;H3BRH4 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 LEGVDGGQS(1)PR;LEGVDGGQS(1)PR 189.61 6.0125e-19 115943000.0 17798.4 17665.2 17916.0 17125.6 20850.9 17818.7 17767.2 16740.0 18328.0 18746.0 20519.2 True False 19605.280465510437 19153.908400024797 19131.887497660035 18183.409416940453 19386.404715699995 17673.590414971153 18443.340518584886 16406.107567724055 17557.737897336858 17562.374360787628 17995.468481925756 1.0894565198567372 1.0643739794416884 1.0631502879114079 1.0104437922915683 1.0772936939747506 0.982113382195196 1.0248880454048175 0.911679936768636 0.9756755104748428 0.9759331566403443 1.0 14.135346040453562 -7.269382969430503 24.776394000838195 0.9844743997382747 1.0584512714235053 0.6248815657164428 0.03163359680970726 296.8692057526435 925947.146163333 0.004701001166549062 0.007596478007666893 5.377953348366094e-08 7.269382969430503 0.0739768716852306 LEGVEGVAHIIDPK ddPTM_A549_MK2206_60min_R1 2 LEGVEGVAHIIDPK 14 0 Q14204;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 62.891000000000005 0.0063072 1451340.0 273.53 453.90999999999997 459.09 339.40999999999997 792.47 622.8299999999999 401.975 341.34000000000003 768.03 737.59 683.01 False True 319.6951768335614 477.0120801936349 524.1958652845935 422.56546523669374 675.898712778661 688.7374571989063 475.00865425132065 389.7259903099085 594.072431291888 570.9679067214973 513.3997668829705 0.6227022243787577 0.9291240685396918 1.0210286390801653 0.8230729589190046 1.316515425946292 1.341522730679198 0.9252217957465471 0.7591082338741041 1.1571342053751006 1.11213121538415 1.0 9.00393883061042 -4.844251080875481 1.0478274326563217 1.065121364561351 1.4369542314463597e-15 0.3493262172211844 0.17142959416779086 3.275089505433405 1.5602974156220968 0.025976688727850365 4.79369295679676 1.4313601405076088e-05 4.844251080875481 -1.0651213645613498 LEGVEGVAHIIDPK ddPTM_A549_PD325901_60min_R1 1 LEGVEGVAHIIDPK 14 0 Q14204;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 77.91199999999999 0.000739 1669300.0 139.79 337.29 340.22 377.25 302.2 432.51 220.04 332.43 373.33 266.61 305.32 False True 153.98137789204105 365.714612019358 363.30937510905864 400.5518757030867 280.97451453340307 428.98778195823326 228.41374261050817 325.79942286371 357.64023839004625 249.77619910005265 267.7675755829455 0.5750561006380802 1.365791250950292 1.356808696191513 1.4958938730018454 1.049322398059979 1.6020901000589862 0.8530298790405756 1.2167246992262817 1.335636839566713 0.9328097270787004 1.0 8.064837462693037 -7.780358951248507 24.999820921316363 1.1469876184065 1.2546685427883355 0.05180141577616293 0.28604721141583933 793.3720671778493 1048338.4676578881 0.042931190332028114 0.059369582733474355 1.6582157993464734e-08 7.780358951248507 0.10768092438183552 LEHLSS(ph)LPT(ph)QMDY(ph)K ddPTM_A549_MK2206_60min_R1 1 LEHLSSLPTQMDYK 14 0 A0A5F9YFS9 A0A5F9YFS9 3 LEHLS(0.595)S(0.659)LPT(0.854)QMDY(0.891)K 44.511 0.012711 9845600.0 1868.0 3096.9 1642.0 2558.4 1964.5 2602.9 1823.0 2577.1 1692.4 2123.2 1653.9 True False 2183.272731784785 3254.518982070603 1874.8602905689572 3185.2081148509387 1675.5246523574137 2878.3371503348176 2154.2155027057847 2942.411817037749 1309.0741022074553 1643.5676453735587 1243.1909846821352 1.7561844951305001 2.617875308115055 1.5081031906359346 2.562122919243456 1.3477612635566365 2.315281550300788 1.732811393622344 2.3668220356263916 1.0529951699594777 1.3220556339489493 1.0 10.279832231485651 -8.77524864468289 24.567447411009812 1.0250253118907209 2.0234947020573935 0.4896383266189257 0.4061183618707355 84.03061476451707 149494.5481326081 0.05934730831654426 0.06334743166021684 1.6778431350363716e-09 8.77524864468289 0.9984693901666726 LEIDDLSS(ph)S(ph)MESVSK ddPTM_A549_PD325901_60min_R1 1 LEIDDLSSSMESVSK 15 0 P11055 P11055 MYH3 Myosin-3 2 LEIDDLS(0.441)S(0.507)S(0.467)MES(0.329)VS(0.256)K 46.481 0.035312 6987200.0 2253.2 2551.3 2860.5 2843.6 3062.4 2927.5 2826.0 3018.4 2553.6 3270.4 2694.9 True False 2481.9432052818297 2766.3070047881297 3054.630731583867 3019.242713715831 2847.3075887064656 2903.6594106095317 2933.5449764465384 2958.1956441110083 2446.2810723832063 3063.9063858700456 2363.444384378617 1.0501381888596324 1.1704557226191852 1.292448746318595 1.27747567646261 1.204727984092193 1.2285710760961888 1.2412159963805574 1.2516459721512592 1.0350491378397162 1.2963733803601178 1.0 11.206675200839419 -8.802231395956788 6.571742582563537 1.0158932398741085 1.2188386871883052 0.0 0.10476804035841064 0.07879434626847133 8.867932845345594 0.01103672587846671 0.011795013318168582 1.5767709282951542e-09 8.802231395956788 0.20294544731419673 LEILQIHTK ddPTM_A549_PD325901_60min_R1 2 LEILQIHTK 9 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 75.294 0.0022402 7623100.0 1824.67 1905.32 1928.43 1578.43 2020.3899999999999 1656.73 1847.32 1974.34 2013.09 1917.0900000000001 1994.43 False True 2009.909155148941 2065.8880031211224 2059.3048563916345 1675.9260362253763 1878.4847763671146 1643.2381401670818 1917.6207734922914 1934.9602398602333 1928.4868280090504 1796.0446102273743 1749.1277537334395 1.1490922551876925 1.1810961198869387 1.1773324458411543 0.9581495877863597 1.073955159854715 0.9394614753894672 1.096329738865106 1.106242946365777 1.102542009234475 1.026823001575381 1.0 10.77241995010614 -6.233697555516619 24.398967840175047 1.046145752888398 1.170365901265895 0.5339227030990223 0.05421162994746681 367.75872064986123 323443.54602946184 0.008148980018711316 0.021555149847440138 5.838515593829335e-07 6.233697555516619 0.12422014837749695 LEIS(ph)PDS(ph)SPER ddPTM_A549_MK2206_60min_R1 2 LEISPDSSPER 11 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 2 LEIS(0.981)PDS(0.571)S(0.449)PER;LEIS(0.998)PDS(0.653)S(0.348)PER 75.695 0.0014934000000000002 4118300.0 959.11 696.8900000000001 698.64 1077.89 1279.53 889.25 1199.6100000000001 889.0 1220.44 1231.51 1339.82 True False 1120.9843200118341 732.358724342143 797.7176573709478 1341.9730983883205 1091.312831983142 983.3498447636227 1417.563608996647 1015.0184724483165 944.0122886422046 953.3110356791598 1007.1057168491552 1.113075123353446 0.7271915073954803 0.792089295120574 1.332504697309073 1.0836129849381038 0.9764117394151476 1.407561872880293 1.0078569265041184 0.9373517326419856 0.9465848716078207 1.0 9.975999417032403 -4.915320076714097 20.904110951403123 1.0044594287369126 7.51214204344581 0.011926725928794402 0.19235860164481106 2487.9872225493637 621753.0247254712 0.025355395614798933 9440.693824845559 1.2152899970762581e-05 4.915320076714097 6.507682614708898 LEIS(ph)PDS(ph)SPER ddPTM_A549_PD325901_60min_R1 2 LEISPDSSPER 11 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 2 LEIS(1)PDS(0.554)S(0.446)PER;LEIS(0.987)PDS(0.55)S(0.463)PER 75.695 0.0014934000000000002 7846600.0 593.05 757.5799999999999 850.9300000000001 722.1500000000001 780.12 520.23 617.85 805.95 725.26 634.62 693.5 True False 653.2559994196648 821.4239253272408 908.6792268577731 766.755565378355 725.3270624678966 515.9934193617069 641.3626198504928 789.8746949944558 694.779844359588 594.5499848950732 608.2038964587078 1.0740740123884025 1.3505732700990825 1.4940371677139774 1.2606883478432491 1.1925722059512331 0.8483888747936337 1.0545190906945072 1.2987004844814931 1.1423469142584783 0.9775504372084179 1.0 9.248411248799878 -6.143947555986935 0.14210843744894106 0.9467832509248536 1.5338821139468763 0.24713667481529866 0.15537867045846812 20.33690979128085 0.6386786075991165 0.5709474504045831 2.432819031815727 7.17880975048694e-07 6.143947555986935 0.5870988630220227 LEIS(ph)PHR ddPTM_A549_MK2206_60min_R1 2 LEISPHR 7 0 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 1 LEIS(1)PHR;LEIS(1)PHR 66.27 0.007500399999999999 5327200.0 478.84000000000003 676.5 538.44 556.37 479.24 433.15999999999997 526.9200000000001 328.78 695.95 698.6500000000001 755.81 True False 559.656485485989 710.9309604348744 614.7988884616009 692.6806749763984 408.7444308453893 478.9967036916629 622.6545434370444 375.3855718465214 538.3184362037805 540.824479766502 568.1215177051841 0.9850999619704813 1.2513712969481265 1.0821608921713806 1.2192473852677623 0.7194665544379176 0.8431236782343265 1.0959883124162164 0.6607487309454816 0.9475410091457416 0.9519521139615638 1.0 9.150055736124623 -6.7337539361989345 24.99998452038488 0.9348764818391253 1.1390836506933677 0.4020593356650103 0.13704750695690648 193.49000575235098 174720.7418568229 0.019037224654300515 0.03962217291417543 1.846061069451772e-07 6.7337539361989345 0.2042071688542424 LEIS(ph)PHR ddPTM_A549_PD325901_60min_R1 1 LEISPHR 7 0 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 1 LEIS(1)PHR 56.431999999999995 0.011565 4755100.0 537.85 444.02 357.55 393.92 426.46 414.0 516.45 287.34 453.36 591.22 349.04 True False 592.452136055757 481.43912368832565 381.81549312281453 418.2515437427699 396.5069208071312 410.6285212612623 536.1037873622836 281.60877828613076 434.30685580186827 553.8902683017633 306.11029274686007 1.9354205006941378 1.5727635923907168 1.2473134754686586 1.3663426341846199 1.2953073784259364 1.3414397718433932 1.751341918468642 0.91995854095311 1.4187920696969873 1.8094467302339503 1.0 8.25790774507805 -2.000000000085292 0.038665430531213164 1.440568615017905e-09 3.675429267002392 0.0 0.317085449661227 519.8239251706242 1.4901801180571705 39.1454299963512 125.83294991127919 0.009999999998036075 2.000000000085292 3.6754292655618235 LEISPDSS(ph)PER ddPTM_A549_MK2206_60min_R1 1 LEISPDSSPER 11 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 LEIS(0.313)PDS(0.233)S(0.454)PER 72.152 0.0021347 2294200.0 1711.2 1631.6 1215.8 1604.0 2184.4 1108.8 1390.9 1339.8 2065.7 1954.4 1723.5 True False 2000.008725176726 1714.641470872936 1388.2187218475865 1996.9800720062954 1863.0776536571827 1226.1324800381274 1643.6085258987803 1529.7207529654163 1597.8222482450599 1512.899682610251 1295.5073838198555 1.5438034164495613 1.3235289063480649 1.0715637279923236 1.5414656040925985 1.4381065495464977 0.9464496268811888 1.2686986939839235 1.18078891102494 1.2333563422338951 1.1678047547281478 1.0 10.339301522928015 -8.003065041987483 0.03692600530627573 6.200166165184034e-11 2.4673885100136257 0.28059198680640984 0.1638726201638392 72.41500832985406 1.553668024529801 48.88853344717308 54.20453029213036 9.929673258201303e-09 8.003065041987483 2.467388509951624 LEIT(ph)SENGEKSDDGTQDLLHFPTK ddPTM_A549_MK2206_60min_R1 1 LEITSENGEKSDDGTQDLLHFPTK 24 1 E9PRS0;E9PLV1;Q9NQV6-2;Q9NQV6-1;Q9NQV6-5;Q9NQV6;Q9NQV6-4;Q9NQV6-7;Q9NQV6-6 E9PRS0 PRDM10 PR domain zinc finger protein 10 1 LEIT(0.337)S(0.337)ENGEKS(0.318)DDGT(0.008)QDLLHFPTK 44.81100000000001 0.019112 1625700.0 1114.7 1289.0 1035.0 1192.0 1442.3 1112.2 897.77 1252.8 1421.8 1372.4 1448.7 True False 1302.8341082015536 1354.6045942358523 1181.778563178362 1484.0400535109138 1230.1395806032572 1229.8922657813916 1060.8831880768914 1430.3882365390898 1099.7645701480492 1062.3738868268044 1088.9478079140263 1.1964155662310805 1.24395731768882 1.0852481217094887 1.3628201854354443 1.1296588979408444 1.1294317843729873 0.9742277640551983 1.313550774558353 1.0099332237554557 0.9755966990391152 1.0 10.088719093567194 -8.287125861326166 0.4946576013505021 0.9901497254306503 1.2173329184213433 0.3432153354060319 0.10558430700164133 0.6198049733739915 0.3433665462687032 0.034017691245639546 0.04732405667846813 5.162667301804959e-09 8.287125861326166 0.227183192990693 LEKHELIEFR ddPTM_A549_MK2206_60min_R1 2 LEKHELIEFR 10 1 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 75.416 0.0055103 3122700.0 677.6500000000001 738.87 805.4100000000001 698.9 1102.0700000000002 675.9100000000001 868.5 514.98 1260.83 831.37 858.88 False True 792.0207530481582 776.4753270310653 919.629248859405 870.1305313748136 939.9569629033011 747.434347567254 1026.2952079539075 587.9799920601062 975.254018131781 643.5629395884584 645.5963921178986 1.2268048005192687 1.2027256293731976 1.4244646656753042 1.3477933612985722 1.4559513875530556 1.157742448211758 1.5896854760713808 0.9107547675897318 1.5106249508805811 0.9968502727799184 1.0 9.334488705986205 -11.037975673022009 1.3027896645649684 0.9980704494630777 1.3337017212265858 0.3064841204459924 0.18075019541720258 0.4197264856342263 1.2574896838578784 0.12527774693995056 0.027380280349048873 9.162718135923486e-12 11.037975673022009 0.33563127176350815 LEKHELIEFR ddPTM_A549_PD325901_60min_R1 2 LEKHELIEFR 10 1 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 93.258 0.0021493000000000003 6962000.0 1031.8899999999999 1203.59 890.38 900.22 1088.99 878.3299999999999 1055.02 1214.02 1403.3200000000002 1222.8000000000002 1119.5 False True 1136.6467131627312 1305.020753299472 950.8065410898937 955.8245448520423 1012.5030992115513 871.1771716893838 1095.1693634290955 1189.8054187197333 1344.3433405767546 1145.592199315647 981.8085970952036 1.1577070281576618 1.32920078023408 0.9684235235900021 0.9735345032422428 1.0312632240206097 0.8873187444751086 1.1154611669415841 1.2118506827500928 1.3692519545603417 1.1668182604073913 1.0 9.939297989328873 -8.001791716812336 24.839546054532402 1.181176174910679 1.0561477322758717 0.16768257961952282 0.1341164982866981 118.91634818877512 1648638.7422405106 0.02705423671366383 0.03706949130199095 9.9588291809284e-09 8.001791716812336 -0.1250284426348074 LEKPAKYDDIKK ddPTM_A549_MK2206_60min_R1 2 LEKPAKYDDIKK 12 3 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 53.251999999999995 0.0065561000000000005 26685000.0 4047.5 5388.299999999999 5225.8 4875.5 7552.1 5083.5 5121.9 4116.3 8511.0 6641.1 6625.5 False True 4730.619048125762 5662.5414547098835 5966.897019765686 6069.997718869512 6441.19609420638 5621.4325958458 6052.482931052526 4699.798130640053 6583.272089274196 5140.870897555736 4980.205495502439 0.9498843074644058 1.13700959926727 1.1981226528010374 1.2188247501737128 1.293359500932912 1.128755148943642 1.2153078696287627 0.9436956235810716 1.3218876400219763 1.0322607977117393 1.0 12.281989557322055 -11.164185790029562 1.5622708470998645 1.0000912023576969 1.1815831476220107 0.14853654093168833 0.1170380191510995 0.47140613379178875 2.0664314947391236 0.0872294945253368 0.018534855864308013 6.851950391210718e-12 11.164185790029562 0.18149194526431378 LEKPAKYDDIKK ddPTM_A549_PD325901_60min_R1 2 LEKPAKYDDIKK 12 3 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 67.275 0.0013755999999999998 56141000.0 9798.4 10060.9 11868.1 12343.4 11909.0 17601.7 14649.9 14836.5 13983.2 13050.7 13628.0 False True 10793.126354799157 10908.767351731618 12673.540634682913 13105.82378410466 11072.552923819643 17458.35759102504 15207.409961232888 14540.574368490912 13395.534731887868 12226.676574753606 11951.842395009764 0.9030512617289528 0.9127268408665045 1.0603838484328139 1.0965525942323935 0.9264306336939944 1.4607252182570951 1.272390436438688 1.2165968967731717 1.1207924510016034 1.0229951308476586 1.0 13.544945408572621 -5.809448771650823 1.5669953560819132 1.1084251047683362 0.8797489275568181 0.2661783107742802 0.14012233147639797 0.6102630107276059 2.5300673869969303 0.022036904145271544 0.15560020318672627 1.5507837027809786e-06 5.809448771650823 -0.22867617721151812 LEKPETQS(ph)SPITVQSSK ddPTM_A549_MK2206_60min_R1 1 LEKPETQSSPITVQSSK 17 1 Q96CB8;A0A087WXN4;E9PGI3 Q96CB8 INTS12 Integrator complex subunit 12 1 LEKPET(0.023)QS(0.551)S(0.424)PIT(0.002)VQSSK 60.602 0.0010025000000000001 27702000.0 2134.1 3451.7 2506.7 2369.3 3631.8 3259.7 2543.8 2379.0 4676.3 4658.3 4076.8 True False 2494.283906264407 3627.376786597277 2862.187752965411 2949.7786063619205 3097.5670310163705 3604.6392903862634 3005.9755325194615 2716.2305353819434 3617.125516516618 3605.9867946701434 3064.418046043974 0.813950273359216 1.1837082056346906 0.9340069500831869 0.9625901433944211 1.010817383422993 1.1762883641282855 0.9809286746630542 0.8863772809615434 1.1803629472767805 1.1767280901263815 1.0 11.581397406929684 -3.240082832005346 0.4658571177806278 1.0659845221870732 1.9446254008425417e-31 0.14600991222936 0.1161765732412274 41.42986203015852 1.3400179306627253 0.023032289256931574 36.729754427523694 0.0005753301954437256 3.240082832005346 -1.0659845221870732 LEKPETQSS(ph)PITVQSSK ddPTM_A549_MK2206_60min_R1 1 LEKPETQSSPITVQSSK 17 1 Q96CB8;A0A087WXN4;E9PGI3 Q96CB8 INTS12 Integrator complex subunit 12 1 LEKPET(0.001)QS(0.143)S(0.856)PITVQSSK 129.77 1.3913e-12 27656000.0 4515.7 4241.0 3921.5 3804.0 5491.3 3805.4 4110.6 4018.9 5516.9 6106.2 6048.0 True False 5277.839761734776 4456.848785224397 4477.627667153571 4735.98017076805 4683.537044281121 4208.084902179919 4857.442811531762 4588.591382365065 4267.330958678981 4726.805179059921 4546.114683691606 1.1609561414427372 0.9803643540301712 0.9849350442513647 1.0417643417042586 1.0302285292279347 0.9256442467841143 1.0684822424205425 1.0093435167453733 0.9386764865363575 1.0397461366332246 1.0 12.150418363781817 -5.260385512484572 24.648099363137817 0.9856072093738331 1.160956209257917 0.485581588702127 0.04425189728218717 40.454532833352644 946000.0167049085 0.0059913484026874325 0.05048948103356616 5.4905327644359205e-06 5.260385512484572 0.17534899988408403 LEKPETQSS(ph)PITVQSSK ddPTM_A549_PD325901_60min_R1 2 LEKPETQSSPITVQSSK 17 1 Q96CB8;A0A087WXN4;E9PGI3 Q96CB8 INTS12 Integrator complex subunit 12 1 LEKPETQS(0.032)S(0.967)PIT(0.001)VQSSK;LEKPETQS(0.286)S(0.713)PIT(0.001)VQSSK 138.04 3.2495e-13 141565000.0 7801.1 9436.7 9465.400000000001 8237.6 10585.6 10020.1 9865.5 10195.7 10069.3 10293.7 10292.9 True False 8593.06192913371 10231.963827101536 10107.778964074088 8746.417843053008 9842.103974337495 9938.499627753568 10240.937001108745 9992.338765128077 9646.122337933983 9643.754025266167 9026.938552068974 0.9519353521204795 1.1334921322530074 1.1197349916331696 0.968924048014964 1.090303641435743 1.100982306506968 1.1344861762420575 1.106946580780461 1.0685928880864146 1.0683305275248405 1.0 13.140021071413406 -10.2426928849875 0.9006175153538694 1.0044698169002955 1.0780586834035495 0.022833259164903197 0.061370723976461414 0.6527156652076272 1.0352875887403779 0.026763028304402914 0.01083049349167984 5.7188290554279214e-11 10.2426928849875 0.07358886650325402 LEKS(ph)IDDLEEK ddPTM_A549_MK2206_60min_R1 3 LEKSIDDLEEK 11 1 H7BYY1;P09493-2;P09493-8;P09493-7;P09493-9;P09493-3;Q6ZN40 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 1 LEKS(1)IDDLEEK;LEKS(1)IDDLEEK;LEKS(1)IDDLEEK 99.566 7.6118e-05 19725300.0 4573.4 4715.3 4446.0 4018.4 6860.7 4819.9 4221.0 4921.3 6631.3 6451.3 7607.6 True False 5345.27811110521 4955.2886293253 5076.509654000963 5002.908180392831 5851.500118314334 5329.938618809322 4987.901062491017 5618.909345849162 5129.321138010104 4993.946849377564 5718.422960921341 0.9347468957147566 0.8665481135601263 0.8877464449014884 0.874875505813717 1.0232716534440385 0.9320644267192459 0.8722511602547456 0.9825977169313573 0.8969817680613954 0.8733084074936893 1.0 12.481401616952962 -14.999999999981544 0.2918773849154987 1.6953426208825813 0.9108284572215016 0.0 0.06053857817472685 41.57536884877291 0.549327603769896 16.986497157250184 0.017794437073763377 1.0000000000424974e-15 14.999999999981544 -0.7845141636610796 LEKS(ph)IDDLEEK ddPTM_A549_PD325901_60min_R1 2 LEKSIDDLEEK 11 1 H7BYY1;P09493-2;P09493-8;P09493-7;P09493-9;P09493-3;Q6ZN40 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 1 LEKS(1)IDDLEEK;LEKS(1)IDDLEEK 137.19 8.690200000000001e-09 47339000.0 15457.4 14197.0 14512.1 15237.1 16367.4 16264.2 14666.6 15461.1 14073.6 15273.2 15036.7 True False 17026.62386886354 15393.431014375832 15496.978374346514 16178.261061035138 15217.81028846466 16131.74974757833 15224.745488871467 15152.716231501698 13482.13553426233 14308.847545459384 13187.281225494806 1.2911398170493384 1.1672937545773958 1.1751458173490985 1.2268079207833915 1.1539763222038715 1.223280938029214 1.154502222902296 1.1490401980817047 1.0223589914953422 1.0850490939554902 1.0 13.686859539529516 -8.63010169505603 1.607542244612225 1.0067025642547487 1.1999556374499964 0.7106200519313766 0.04446900624286262 0.08907100736586908 0.44943144133890534 0.006545850453137647 0.007378897552637539 2.3436799514011024e-09 8.63010169505603 0.19325307319524776 LEKS(ph)PLAGNKDNK ddPTM_A549_MK2206_60min_R1 2 LEKSPLAGNKDNK 13 2 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 LEKS(1)PLAGNKDNK;LEKS(1)PLAGNKDNK 57.498999999999995 0.0027607 42366000.0 9600.3 9337.6 7967.4 7579.7 9566.3 7611.1 7470.6 7761.7 10640.3 9558.2 10127.4 True False 11220.595935199939 9812.843955885723 9097.297124895927 9436.726840265661 8159.1099424009835 8416.501550160716 8827.911318987295 8861.94474420934 8230.289039067582 7398.9959815418 7612.487077979229 1.4739724114157051 1.2890457291246515 1.195049269930695 1.239637813975861 1.0718060810904992 1.1056178439379258 1.1596619118768614 1.1641326485590286 1.0811563888069484 0.9719551449808042 1.0 12.894152158741667 -2.0000000000000004 0.2597652687685759 1.0256708496386313 3.7444958949867946 0.8350685813069345 0.05486021394945173 12.60341162853204 0.15456398349961942 0.023800920378134312 15.415679612750324 0.00999999999999999 2.0000000000000004 2.7188250453481633 LEKS(ph)PLAGNKDNK ddPTM_A549_PD325901_60min_R1 2 LEKSPLAGNKDNK 13 2 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 LEKS(1)PLAGNKDNK;LEKS(1)PLAGNKDNK 44.005 0.013425 34178000.0 7237.2 8436.0 7796.1 7209.1 9243.6 8430.099999999999 7948.8 8840.3 11392.8 11809.7 11398.7 True False 7971.915216254948 9146.93132614458 8325.19022775773 7654.389733945985 8594.361424688832 8361.448060590743 8251.295933750256 8663.97328141881 10914.000235529209 11064.033526543988 9996.73216231272 0.7974521160333522 0.9149921371934066 0.8327911654113694 0.7656891881931905 0.8597170840576513 0.836418133929112 0.8253993204756761 0.8666805452767498 1.0917567919519293 1.1067650255005281 1.0 13.287240853179084 -8.684858273740856 5.7353651734850075 1.0431730930659682 0.8360781023155185 0.8370638635369442 0.04474417230422545 0.06125634649448282 3.448885430251381 0.007911705704968538 0.008941971867368465 2.0660542752916896e-09 8.684858273740856 -0.20709499075044968 LEKS(ph)PSFASEWDEIEK ddPTM_A549_MK2206_60min_R1 1 LEKSPSFASEWDEIEK 16 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 LEKS(0.875)PS(0.109)FAS(0.015)EWDEIEK 46.702 0.0076939999999999995 1347000.0 570.03 676.96 526.49 365.74 982.82 593.82 772.23 809.46 997.88 1082.7 1037.4 True False 666.2371281045404 711.4143724700556 601.1541987707978 455.34631641869225 838.2484799337815 656.6576382541857 912.5341950929727 924.2034338672837 771.8617732869153 838.1173180321927 779.7849492165469 0.8543857236202257 0.9123212408559777 0.7709230594598933 0.5839383241189516 1.0749739152775046 0.8421009393858297 1.170238276604081 1.1852029649916103 0.9898392807688939 1.074805712618912 1.0 9.606932499036821 -6.788050596277102 24.999937905656093 1.0160038174893742 0.7891390806798502 0.5344624969082894 0.1177072526720634 146.57893713758108 137703.39498749966 0.016921158826392856 0.03198435432481217 1.6291062270696266e-07 6.788050596277102 -0.22686473680952401 LEKS(ph)PSFASEWDEIEK ddPTM_A549_PD325901_60min_R1 1 LEKSPSFASEWDEIEK 16 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 LEKS(0.813)PS(0.181)FAS(0.006)EWDEIEK 42.64 0.021113 1601600.0 1801.4 1366.6 2020.6 1573.5 1628.9 1952.8 1951.3 1660.1 1949.1 2143.8 1855.2 True False 1984.2768018794104 1481.7681780831172 2157.7300668548696 1670.6915213222196 1514.4916833999355 1936.8970442487764 2025.557789292331 1626.9880031767445 1867.18610517783 2008.4401021368028 1627.0221610817512 1.2195757681383594 0.9107240291662286 1.3261835754101032 1.026840052511291 0.9308365427505929 1.190455232005568 1.2449478794717874 0.9999790058759962 1.1476095100858381 1.2344270103865456 1.0 10.668018186234915 -10.921208140661989 1.073036339513592 0.9974532204424189 1.1099735834896423 0.0 0.14411723452216127 1.0600226222544809 2.084386863623101 0.09306801020375326 0.02000638802796 1.1989245669469888e-11 10.921208140661989 0.11252036304722335 LEKT(ph)IDDLEEK ddPTM_A549_PD325901_60min_R1 2 LEKTIDDLEEK 11 1 P67936;A0A2R8YE05;K7ENT6;P67936-2;A0A5F9UN72;K7EPB9 P67936 TPM4 Tropomyosin alpha-4 chain 1 LEKT(1)IDDLEEK;LEKT(1)IDDLEEK 118.33 6.264199999999999e-06 9856100.0 4308.2 4966.1 4455.9 4423.2 5198.4 4578.5 4072.7000000000003 4947.0 5113.7 5496.3 5862.6 True False 4745.565292470785 5384.610675529465 4758.304169503425 4696.411018183945 4833.282317506428 4541.214213996836 4227.688827166955 4848.328204153579 4898.7889723707685 5149.2626799955715 5141.537366083373 0.9229856664614255 1.0472763868351025 0.9254633061488611 0.9134254375285211 0.9400461327753099 0.8832405350106713 0.8222616167404122 0.9429724728125141 0.952786807441308 1.0015025299559543 1.0 12.327984087427128 -9.541679791415099 1.0945068522266772 0.989931200548762 0.9258845134998471 0.23551875923885845 0.05094253897401735 0.5108807639549212 1.2716870355455567 0.01480518885750382 0.010756697984648742 2.872898010621641e-10 9.541679791415099 -0.06404668704891492 LEKVPDS(ph)PENELK ddPTM_A549_MK2206_60min_R1 2 LEKVPDSPENELK 13 1 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46 A0A2R8Y549 INADL InaD-like protein 1 LEKVPDS(1)PENELK;LEKVPDS(1)PENELK 117.26 4.3362e-06 16687100.0 4963.0 5655.3 6481.4 5481.6 6389.4 5295.8 5226.4 5628.0 7495.0 7862.0 7637.200000000001 True False 5800.633066299727 5943.13061426068 7400.559980081382 6824.592246078373 5449.5277239869965 5856.198040932467 6175.96922838262 6425.786235027145 5797.394467055584 6085.968739603859 5740.672464002905 1.0104448743022367 1.035267323040514 1.289145135258432 1.188814078641871 0.9492838614567296 1.020124049517538 1.0758267898245821 1.1193438182234348 1.009880724498455 1.0601490988671007 1.0 12.487004029168888 -6.757206713505752 24.999971695709164 1.0170554470198652 1.1353876211178133 0.2333436008948625 0.0813797876771473 102.35797824584884 604562.889272389 0.011862491255154168 0.024012921102021367 1.7490140027673187e-07 6.757206713505752 0.11833217409794816 LEKVPDS(ph)PENELK ddPTM_A549_PD325901_60min_R1 4 LEKVPDSPENELK 13 1 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46 A0A2R8Y549 INADL InaD-like protein 1 LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK 119.62 3.3011e-06 39602400.0 16836.0 17451.5 18872.2 19540.6 21842.7 22996.2 19497.4 20136.699999999997 23070.0 19992.199999999997 22285.1 True False 18545.178325991863 18922.19915104458 20152.980979757733 20747.57848207751 20308.544105224224 22808.9265715658 20239.384226386654 19735.057721564433 22100.448128086056 18729.8890801098 19544.173976888178 0.9488852456963558 0.968175947134982 1.0311503061520786 1.0615735669674458 1.0391098712710982 1.1670447980323104 1.0355712270224666 1.0097667849714183 1.1307946886995983 0.9583361825502932 1.0 14.254450990800855 -5.809880461154688 1.927571411434505 1.063529797908405 0.9463298962233826 0.2611563713343328 0.05610362394997408 0.32402037244419385 2.215050028332946 0.00799204567745725 0.04597237519916973 1.5492429868276522e-06 5.809880461154688 -0.11719990168502248 LELDVRS(ph)VTSVR ddPTM_A549_PD325901_60min_R1 1 LELDVRSVTSVR 12 1 Q9NSI2;Q9NSI2-2;C9JJU7 Q9NSI2 FAM207A Protein FAM207A 1 LELDVRS(0.975)VT(0.018)S(0.007)VR 67.32600000000001 0.00066905 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LELKAS(ph)PNVEAPQPHR ddPTM_A549_MK2206_60min_R1 2 LELKASPNVEAPQPHR 16 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR 140.35 4.0443e-12 24567000.0 2486.8 2288.81 2541.5 2185.1 2590.27 2201.75 2550.5 2533.0 4035.3999999999996 3180.9 3566.6000000000004 True False 2906.511043577305 2405.3006527020625 2901.9229162490874 2720.449598092867 2209.2447143099193 2434.7377235966337 3013.8928357932546 2892.060506987162 3121.388343209622 2462.3324807690065 2680.9147868476352 1.084148984457256 0.8971939968037348 1.0824375808159592 1.0147467616051007 0.8240637580680693 0.9081742305056738 1.1242031453514243 1.0787588330578024 1.1642997228121224 0.918467268280597 1.0 11.38850964850099 -7.7663481325395605 24.999743978290056 1.0828418149131247 0.9659426364122261 0.152865080778272 0.09551936488573805 125.90147605185298 641202.9728221984 0.014382441092858429 0.020212846215257915 1.7125839416325017e-08 7.7663481325395605 -0.11689917850089859 LELKAS(ph)PNVEAPQPHR ddPTM_A549_PD325901_60min_R1 4 LELKASPNVEAPQPHR 16 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR 133.09 1.4316e-10 58578000.0 9345.4 9875.099999999999 9972.3 10823.0 12759.699999999999 12031.8 10308.7 11054.0 10960.900000000001 12574.5 12267.2 True False 10294.138128280134 10707.30933366646 10649.080246311405 11491.51212918359 11863.502690575322 11933.817009930572 10701.003219637087 10833.519298304758 10500.25149055651 11780.5439240224 10758.412168187828 0.9568454868014322 0.9952499649834502 0.9898375410639395 1.0681420222180655 1.1027187381475494 1.1092544906597246 0.9946638084084102 1.006981246762326 0.9760038309003731 1.0950076776995934 1.0 13.393177546094632 -7.9600741087966975 24.996824542898008 0.9902536865423024 1.0385838220916588 0.0 0.05432875978649063 199.2709644881617 124759.25012884992 0.007501068751007376 0.010364210529337399 1.0962911070816446e-08 7.9600741087966975 0.04833013554935639 LELQFPRT(ph)PEGR ddPTM_A549_MK2206_60min_R1 3 LELQFPRTPEGR 12 1 P48681 P48681 NES Nestin 1 LELQFPRT(1)PEGR;LELQFPRT(1)PEGR;LELQFPRT(1)PEGR 82.529 0.00025421 17301300.0 1816.08 1895.48 1460.41 1375.98 2116.3 1670.28 1583.76 1722.1699999999998 2303.3 2152.33 2454.88 True False 2122.5899051069136 1991.9518357503273 1667.518098020591 1713.0951617700891 1804.995073445659 1847.0279209578687 1871.5086914785054 1966.292871424429 1781.6062276142932 1666.1171581418955 1845.26554475874 1.1502896757249281 1.0794933235534758 0.9036737843813213 0.928373245051876 0.9781763272893355 1.0009550799905924 1.0142218808530328 1.0655880271592633 0.9655012703590203 0.9029145766441614 1.0 10.849612728340738 -5.558296944633811 6.418795280516063 0.9840092643620385 1.1339942938317673 0.5769802182712596 0.047593511405608316 0.07404558271052719 8.75693313558107 0.005829627539929097 0.023894062195003465 2.7650504225623608e-06 5.558296944633811 0.1499850294697288 LELQFPRT(ph)PEGR ddPTM_A549_PD325901_60min_R1 2 LELQFPRTPEGR 12 1 P48681 P48681 NES Nestin 1 LELQFPRT(1)PEGR;LELQFPRT(1)PEGR 60.549 0.003426 34643000.0 1695.0900000000001 1588.3600000000001 1718.8200000000002 1660.1100000000001 1863.89 1499.1 1727.3600000000001 1799.4299999999998 1798.73 1798.9099999999999 2103.64 True False 1867.1742889406964 1722.2166715499045 1835.46946130431 1762.6512243166378 1732.976796471426 1486.891826625021 1793.095630047662 1763.5389570244733 1723.1356333520687 1685.3265155960992 1844.9056160726686 1.0120703588704076 0.9334985250985698 0.9948852913199724 0.9554153930480578 0.9393308694894049 0.8059446584537114 0.9719172701445309 0.9558965736028252 0.9339966328576651 0.9135028377135778 1.0 10.849331295686541 -10.749724365891332 0.8774114509430181 1.0019403426791595 0.9426078044343401 0.0 0.056162500527501616 1.0207588681589095 1.3199183733299156 0.040559285487934714 0.009094106179754485 1.7794083906198406e-11 10.749724365891332 -0.05933253824481943 LELQGPR ddPTM_A549_PD325901_60min_R1 2 LELQGPR 7 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 143.02 0.013381 20144200.0 3195.5 3227.0 3676.6000000000004 3613.3 4009.7 3999.8 3658.6 3394.6000000000004 4005.3999999999996 3786.4 4144.3 False True 3519.9048075972314 3498.9506151574856 3926.116185191834 3836.4853346003047 3728.0725047140495 3967.226954929462 3797.830025062738 3326.892039987819 3837.066967153701 3547.3260578089344 3634.577372882223 0.9684495462552071 0.9626843113214054 1.0802125756036447 1.0555519778515456 1.0257237973607052 1.0915235935075025 1.0449165433644505 0.9153449489918524 1.0557120054128615 0.9759940961157478 1.0 11.827571902591083 -5.727963374720778 24.98163633080875 1.0295949574843941 0.9655667838185793 0.1990662363241611 0.047502635590425515 210.42646600143897 157028.98267688078 0.006198220593601987 0.02400315931750727 1.8708399069220505e-06 5.727963374720778 -0.06402817366581481 LELQGPRGS(ph)PNAR ddPTM_A549_MK2206_60min_R1 4 LELQGPRGSPNAR 13 1 P19338;H7BY16 P19338 NCL Nucleolin 1 LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR 118.47 3.8050999999999998e-06 2955577000.0 13250.4 15852.400000000001 16332.5 15070.8 20655.3 12899.759999999998 13133.31 11364.52 22755.999999999996 24839.0 24627.2 True False 15486.74357882287 16659.21944892506 18648.694089961937 18763.14667655391 17616.932731910463 14264.80404103232 15519.462426681803 12975.475512382844 17601.802333864827 19227.852648565295 18511.586563857476 0.8365973130071741 0.8999347188020596 1.0074065788813669 1.01358933292015 0.9516706021463466 0.7705878689449185 0.8383647924042569 0.7009380566934502 0.9508532546978476 1.0386928522975052 1.0 14.176140928443425 -8.983198920891255 24.1386588272199 0.9783178086096598 0.8809566805106663 0.2509042816669623 0.09116752172717828 91.40816946724924 131332.16564812546 0.01729887903930425 0.01750425166461126 1.0394439578932714e-09 8.983198920891255 -0.09736112809899344 LELQGPRGS(ph)PNAR ddPTM_A549_PD325901_60min_R1 11 LELQGPRGSPNAR 13 1 P19338;H7BY16 P19338 NCL Nucleolin 1 LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR 138.81 6.146e-09 6473930800.0 59451.8 64853.6 66624.6 72888.09999999999 74975.49999999999 90134.90000000001 77910.20000000001 86324.6 82891.40000000001 80098.1 93751.09999999999 True False 65487.302969898046 70319.04047572905 71146.14600226634 77390.2323961145 69709.47953143335 89400.8712585308 80875.11529509729 84602.78813266152 79407.76272060831 75040.69229637268 82220.30903718802 0.7964857312842052 0.8552514737438404 0.8653110993548702 0.9412544577169019 0.8478377221849644 1.0873331942609827 0.983639154877388 1.0289767713521474 0.9657925596544814 0.9126783050940854 1.0 16.32720717404411 -6.443007625962598 0.9360014658923347 0.9916096813956259 0.8154097566300552 0.5717485258245327 0.05514615625779556 0.31535232408183517 0.47454737509445194 0.007600265469457413 0.03689844486936699 3.605723115225838e-07 6.443007625962598 -0.17619992476557067 LELQGPRGSPNAR ddPTM_A549_PD325901_60min_R1 1 LELQGPRGSPNAR 13 1 P19338;H7BY16 P19338 NCL Nucleolin 0 47.037 0.035795 6442200.0 1816.9 1733.9 2390.0 2105.9 2490.3 2047.2 2365.4 2574.3 2517.3 2562.5 2318.3 False True 2001.350350468913 1880.0218381225802 2552.199772237525 2235.9766601540914 2315.3899190686107 2030.5282819469958 2455.416591396547 2522.9535670007167 2411.506635146557 2400.7033126810143 2033.1637969145252 0.984352738085396 0.9246780023211366 1.255284879708499 1.0997523483092457 1.138811306094661 0.9987037370173869 1.2076826250412394 1.2409003007182615 1.186085763875097 1.180772211429427 1.0 10.98951073175679 -5.731614057764111 24.999894780334465 1.1143133553138052 0.9545151779505346 0.3796445857837769 0.08697387655362318 203.70947034991994 170748.5629869924 0.01352692405584713 0.05237434466286109 1.855179523903889e-06 5.731614057764111 -0.1597981773632705 LELSSSAS(ph)PQEER ddPTM_A549_MK2206_60min_R1 1 LELSSSASPQEER 13 0 A0A075B6T1;Q9C0C7-6;Q9C0C7-4;Q9C0C7-2;Q9C0C7-3;Q9C0C7;Q9C0C7-5 A0A075B6T1 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 1 LELSSS(0.001)AS(0.998)PQEER 214.32 1.4967e-37 26015000.0 4503.7 5558.4 5037.7 4073.0 7519.8 5339.9 4535.5 5226.0 7511.2 7127.3 7930.4 True False 5263.814455106605 5841.298818154039 5752.121611327181 5070.885182843917 6413.647381418828 5904.964673661258 5359.541641537074 5966.801503953773 5809.9251929216725 5517.23797987517 5961.0628120945685 0.8830328787052375 0.9799089528636509 0.9649490019894673 0.8506679668859478 1.0759234692857116 0.9905892388317916 0.8990916235042765 1.0009626960896236 0.9746458603210406 0.925546023216043 1.0 12.541353859819495 -2.0000000000000004 0.2334376490289137 0.9929432531791063 0.5515986132200048 0.06142702033744607 0.05917685995795757 65.27217360468251 0.7754001890201002 0.029017286646103937 11.2291115685311 0.00999999999999999 2.0000000000000004 -0.44134463995910145 LENARLS(ph)SEMNTSTVNSAR ddPTM_A549_MK2206_60min_R1 1 LENARLSSEMNTSTVNSAR 19 1 P20700;E9PBF6;A0A0D9SFE5 P20700 LMNB1 Lamin-B1 1 LENARLS(0.907)S(0.093)EMNTSTVNSAR 64.547 0.00059971 4130300.0 2146.6 2127.8 2093.1 1632.3 2903.1 2068.1 2196.3 1571.7 3170.2 2872.3 2795.3 True False 2508.8936006687486 2236.095931431378 2389.933053708821 2032.2135732767306 2476.057835713314 2286.944969306324 2595.3392806323177 1794.4932881293803 2452.15476176913 2223.4454351010136 2101.149863644702 1.1940574273539752 1.064224865689778 1.1374405486542445 0.9671911596784474 1.1784299057175716 1.0884254421240271 1.2351995093440806 0.8540529731737516 1.1670537186317433 1.058204116504177 1.0 11.036963349969753 -11.092276831381726 1.3881089532045976 0.9993935412217313 1.103030643820363 0.050644587874346 0.1052113570800816 0.7377864206904625 2.5149062888228038 0.0716926365037202 0.015278330113680029 8.085803232876581e-12 11.092276831381726 0.10363710259863168 LENDQGGTT(ph)SR ddPTM_A549_PD325901_60min_R1 1 LENDQGGTTSR 11 0 H0Y9Z7;Q9H1H9-3 H0Y9Z7;Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 LENDQGGT(0.095)T(0.537)S(0.368)R 56.951 0.015025 6714500.0 857.42 1075.4 1045.6 1106.5 1472.6 1234.6 1196.1 934.26 984.2 1211.3 1219.8 True False 944.4646472007566 1166.0277321166286 1116.5607037035797 1174.8459919561708 1369.1696561942063 1224.5458269303251 1241.6182400310342 915.6254513872086 942.8374966476937 1134.818311278249 1069.7723329492887 0.8828650901794521 1.0899774617483051 1.043736755301288 1.0982205799968683 1.2798701312638172 1.1446789089734042 1.160637830862552 0.8559068347401472 0.8813440650950054 1.060803571307208 1.0 10.0630880821548 -8.256240306830744 24.985784214867397 0.9357978416386686 1.1060170824236737 0.3246985437933121 0.10348161931134835 343.74242281634474 1651963.6660599033 0.016633351248832973 0.02114937374987444 5.543189085063695e-09 8.256240306830744 0.17021924078500505 LENEGS(ph)DEDIETDVLYSPQMALK ddPTM_A549_MK2206_60min_R1 1 LENEGSDEDIETDVLYSPQMALK 23 0 O60502-3;O60502 O60502-3 MGEA5 Protein O-GlcNAcase 1 LENEGS(0.998)DEDIET(0.001)DVLYSPQMALK 50.144 0.0024162 2315900.0 438.33 692.21 520.18 493.23 976.64 698.5 654.25 690.58 940.64 796.59 820.78 True False 512.3093878603987 727.4405323320392 593.9493458880388 614.0713721419363 832.9775497471846 772.4148063732259 773.1187562508286 788.4718298125524 727.5865418934175 616.6397657442178 616.9576736244047 0.8303801212987029 1.1790768855480593 0.9627067970462215 0.9953217188052587 1.3501372709309873 1.251973740492709 1.2531147423923485 1.2779998750652757 1.1793135461288744 0.9994847168715492 1.0 9.269027706464213 -5.254950581633152 23.727006574976457 1.1270295488776187 0.8303798426208557 0.31771098470352765 0.13013045447276111 379.8664427277708 1388942.9066866038 0.01925957781016979 0.24599200250079556 5.559675172120667e-06 5.254950581633152 -0.296649706256763 LENEGS(ph)DEDIETDVLYSPQMALK ddPTM_A549_PD325901_60min_R1 3 LENEGSDEDIETDVLYSPQMALK 23 0 O60502-3;O60502 O60502-3 MGEA5 Protein O-GlcNAcase 1 LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(0.967)DEDIET(0.024)DVLY(0.008)S(0.002)PQMALK;LENEGS(1)DEDIETDVLYSPQMALK 91.583 2.178e-07 7228800.0 1232.11 2073.09 1823.01 1666.93 1945.8700000000001 1688.88 2221.24 2475.3900000000003 1463.9699999999998 1725.53 2210.3 True False 1357.1929001685571 2247.7965698099874 1946.7304212496776 1769.8924802272936 1809.1988040870729 1675.1263212263793 2305.7705037091673 2426.016404544113 1402.4444319928105 1616.5797413192088 1938.4471122461157 0.7001444050727552 1.1595862252880464 1.0042731673983945 0.913046566525349 0.9333237892627979 0.8641588984521628 1.1894936359844386 1.2515257131431567 0.7234886229977001 0.8339560729340957 1.0 10.920685658419675 -8.79595700384415 24.99983496817577 0.8694252612980653 1.0036851913442957 0.14392774603645375 0.16085891942501132 302.1837195748946 218859.13714807236 0.030148869370222122 0.032096623939771106 1.599716396389768e-09 8.79595700384415 0.13425993004623038 LENS(ph)PLGEALR ddPTM_A549_MK2206_60min_R1 4 LENSPLGEALR 11 0 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4 D6RDK6 OCIAD1 OCIA domain-containing protein 1 1 LENS(1)PLGEALR;LENS(1)PLGEALR;LENS(1)PLGEALR;LENS(1)PLGEALR 150.11 1.0058999999999998e-11 139550100.0 3557.61 4138.820000000001 3950.62 3356.5299999999997 4510.65 4042.6099999999997 3794.6 3812.2000000000003 5760.5 5070.400000000001 5764.9 True False 4158.047592786333 4349.468259670464 4510.877321027731 4178.880000680358 3847.1393602219237 4470.39630693266 4484.029701902015 4352.591024372864 4455.755947628249 3924.993118454263 4333.316226854128 0.9595532324685577 1.0037274069028796 1.0409757988750588 0.9643607301916465 0.8878048955625941 1.031633989513396 1.0347801700032635 1.0044480477559627 1.0282554317211712 0.9057712183871018 1.0 12.081255806817078 LENS(ph)PLGEALR ddPTM_A549_PD325901_60min_R1 2 LENSPLGEALR 11 0 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4 D6RDK6 OCIAD1 OCIA domain-containing protein 1 1 LENS(1)PLGEALR;LENS(1)PLGEALR 183.06 1.4353e-18 253920000.0 4781.7 5368.4 4818.5 4186.299999999999 4869.2 4800.4 4359.6 4289.9 4302.7 4474.0 5093.4 True False 5267.134663898511 5820.81390840144 5145.512385994354 4444.8782432228845 4527.204189828081 4761.307133967544 4525.50696366466 4204.334579138553 4121.872482042304 4191.510876462381 4466.94408972283 1.1791360173987162 1.303086358701798 1.1519088402813722 0.9950601919216512 1.0134902293144643 1.0658980811785759 1.0131102769064353 0.9412104773846471 0.9227499604316881 0.938339677477911 1.0 12.125072481997591 -6.157231179782436 2.638170557563162 0.9760997244299937 1.242013194192792 0.8183311082377048 0.04808712281048674 0.0868373667816396 1.1639429472210403 0.007520561864231508 0.02376290181855071 6.962557907490737e-07 6.157231179782436 0.2659134697627984 LENSALLTVEPS(ph)PQDKNK ddPTM_A549_MK2206_60min_R1 2 LENSALLTVEPSPQDKNK 18 1 O75509 O75509 TNFRSF21 Tumor necrosis factor receptor superfamily member 21 1 LENSALLT(0.001)VEPS(0.999)PQDKNK;LENSALLT(0.002)VEPS(0.998)PQDKNK 100.19 9.2868e-09 15885700.0 4386.6 5252.9 4514.7 3386.3 5666.6 4047.7 3529.8 4196.8 6304.5 6533.9 5871.9 True False 5126.950837926733 5520.250173050045 5154.952347035121 4215.943652016786 4833.0506464996315 4476.024927354196 4171.118969528731 4791.709252160961 4876.540816217741 5057.887452009368 4413.745173804358 1.16158741296513 1.2506952612064717 1.1679315737641218 0.9551851060723833 1.0949999277674338 1.014110409889422 0.9450294036648021 1.0856334164010704 1.1048532763422958 1.1459400696777882 1.0 12.107787623137515 -6.088906710068751 6.046309777745529 1.04147292222481 1.2070744615109026 0.5379865635329949 0.0625301606955334 0.11477016296316295 6.292064604892656 0.00814796079503712 0.022080119803799172 8.148793078203551e-07 6.088906710068751 0.16560153928609256 LENSALLTVEPS(ph)PQDKNK ddPTM_A549_PD325901_60min_R1 2 LENSALLTVEPSPQDKNK 18 1 O75509 O75509 TNFRSF21 Tumor necrosis factor receptor superfamily member 21 1 LENSALLT(0.024)VEPS(0.976)PQDKNK;LENSALLTVEPS(1)PQDKNK 112.36 3.8042e-10 13065800.0 4564.799999999999 4138.7 4272.700000000001 4468.299999999999 5559.1 5518.9 5191.4 6325.5 7038.4 8110.0 8926.099999999999 True False 5028.215135571847 4487.482773768915 4562.671115832332 4744.296742754414 5168.647993853879 5473.955908185462 5388.961567843085 6199.33294024125 6742.600524695312 7597.933215938739 7828.246287209913 0.6423169316718019 0.5732424107683908 0.5828471599427062 0.606048477358949 0.6602561805315978 0.699256986475888 0.6883995942549451 0.7919184850341201 0.8613168616975719 0.9705792251774872 1.0 12.934473430476949 -8.551003781209287 0.461333010169645 0.9920192126623228 0.5787290492012491 0.9676675029935913 0.025914862511760405 0.09849129865705651 0.050554147305671725 0.011325469591791752 0.012756571974465438 2.811876348533082e-09 8.551003781209287 -0.4132901634610737 LENT(ph)TPTQPLTPLHVVTQNGAEASSVK ddPTM_A549_MK2206_60min_R1 1 LENTTPTQPLTPLHVVTQNGAEASSVK 27 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LENT(0.382)T(0.305)PT(0.305)QPLT(0.008)PLHVVTQNGAEASSVK 80.847 3.3306e-06 2459100.0 707.65 695.7 791.23 828.35 887.68 578.46 587.31 579.82 1164.2 1194.0 1009.6 True False 827.0840196185778 731.1081584250439 903.4383116363434 1031.2957871860447 757.1034479025852 639.6722532493286 694.0166247362226 662.011260624278 900.5105588453791 924.2745707309863 758.8884564575142 1.0898624331161921 0.9633934370775009 1.1904757595781428 1.358955691591523 0.9976478643999128 0.8429068169455549 0.9145173033411093 0.8723433002453901 1.1866178108031264 1.2179320463582926 1.0 9.567744039655931 -4.90972195321793 18.906767070706668 1.0607567286637327 2.5741271458661568 0.002770830874545993 0.15602815475160994 2501.8687863931855 604877.240470239 0.021497059578468997 24964.328517613594 1.2310566735196056e-05 4.90972195321793 1.513370417202424 LENTS(ph)PMVK ddPTM_A549_PD325901_60min_R1 2 LENTSPMVK 9 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 LENT(0.319)S(0.681)PMVK;LENT(0.222)S(0.778)PMVK 60.641000000000005 0.0079938 10144800.0 7850.9 9214.599999999999 8380.1 9315.7 9994.5 8991.3 7898.8 9318.7 9202.3 9207.7 10905.5 True False 8647.917588472883 9991.146680641506 8948.823979635012 9891.10963151026 9292.520799153202 8918.077833856016 8199.39315638921 9132.831218121273 8815.559332860266 8626.324250604084 9564.192635660333 0.9041973450251206 1.0446408872390613 0.9356591110753141 1.0341813478987247 0.9715949012262473 0.9324443968856021 0.8573011302404727 0.9548982926242287 0.9217254052361129 0.9019396178241557 1.0 13.223427472816297 -7.009310536079426 24.47771467237097 0.9508245480310594 0.9838820133010989 0.11063145503084837 0.051919986604146776 744.7446680210378 1957969.5988991077 0.0077013351415313866 0.014014735744338817 9.787898653902358e-08 7.009310536079426 0.0330574652700395 LENTTPTQPLT(ph)PLHVVTQNGAEASSVK ddPTM_A549_MK2206_60min_R1 2 LENTTPTQPLTPLHVVTQNGAEASSVK 27 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LENTT(0.002)PT(0.01)QPLT(0.988)PLHVVTQNGAEASSVK;LENTTPT(0.002)QPLT(0.998)PLHVVTQNGAEASSVK 155.55 7.749e-41 11694500.0 1781.54 2190.3999999999996 1680.47 1930.89 3214.3 2098.8999999999996 2083.48 2102.4700000000003 3931.0 3216.8999999999996 3624.9 True False 2082.220397528837 2301.882004045158 1918.7859150380102 2403.9581366809457 2741.4807279574643 2321.004204862939 2462.0213469980513 2400.501561044335 3040.6347765170785 2490.2000557659185 2724.7372878494875 0.7641912513232569 0.8448087873682419 0.7042095117186221 0.8822715303236744 1.0061449741164556 0.8518267853613157 0.9035811848639594 0.8810029398977187 1.1159368611705367 0.9139229924552914 1.0 11.411901420317562 -7.453555383248689 0.5408596329841766 1.0521020276998518 0.7736684085563155 0.34847797679241654 0.08802764395917612 0.5029205568688296 0.2856444208705705 0.021574505994293103 0.05814675877052473 3.519205411217718e-08 7.453555383248689 -0.27843361914353637 LENTTPTQPLT(ph)PLHVVTQNGAEASSVK ddPTM_A549_PD325901_60min_R1 2 LENTTPTQPLTPLHVVTQNGAEASSVK 27 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LENTTPTQPLT(1)PLHVVTQNGAEASSVK;LENTTPT(0.001)QPLT(0.999)PLHVVTQNGAEASSVK 183.31 1.6831999999999997e-57 20746000.0 2790.8 2967.8 2978.2 3255.1 3856.3 3575.7 3498.6 3544.2 3860.3 4005.3 4269.5 True False 3074.119961521627 3217.906921495007 3180.3185613714636 3456.160134131525 3585.4467915127816 3546.580684719556 3631.741137507377 3473.508150628886 3698.0650155548583 3752.4046744512275 3744.3785665904143 0.8209960362851033 0.8593967902196369 0.8493581791510528 0.9230263640993605 0.9575545655303881 0.9471747104751295 0.9699182582423541 0.9276594470499334 0.9876311782551067 1.0021435086538597 1.0 11.870510587247077 -4.130801003156634 0.27127494159070814 1.0025165368840216 0.49602638621749806 0.8937697317844822 0.019525532337107576 3.1249188393237706 0.10415517733728101 0.008533086590141074 0.5916220914803431 7.399442451479372e-05 4.130801003156634 -0.5064901506665236 LENVSQLSLDKS(ph)PTEK ddPTM_A549_MK2206_60min_R1 2 LENVSQLSLDKSPTEK 16 1 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 LENVSQLSLDKS(0.999)PT(0.001)EK;LENVSQLS(0.014)LDKS(0.899)PT(0.087)EK 230.42 9.357699999999999e-56 143872000.0 15601.2 16726.0 16805.5 15719.3 21925.6 16508.5 15701.6 17298.0 24089.8 22377.8 21164.7 True False 18234.30114728095 17577.281957477768 19188.772602409634 19570.529205666193 18700.373284666694 18255.418512544587 18554.377475197572 19750.04447290324 18633.49876350577 17322.63943794292 15908.920873996 1.1461683222704258 1.104869531798904 1.2061643121108692 1.2301606979298825 1.1754645983080774 1.1474957137026225 1.1662876207729285 1.2414446353294626 1.1712610120503675 1.0888632594972372 1.0 13.957548358365173 -10.490168459353717 0.7698670584845734 0.9971342448207123 1.1776052965770047 0.5345216321172386 0.04484800603223583 0.27523503432672053 0.28811529024284815 0.02892160940580252 0.007889000796831037 3.234681618807768e-11 10.490168459353717 0.1804710517562924 LENVSQLSLDKS(ph)PTEK ddPTM_A549_PD325901_60min_R1 3 LENVSQLSLDKSPTEK 16 1 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 LENVSQLS(0.019)LDKS(0.875)PT(0.106)EK;LENVSQLS(0.002)LDKS(0.975)PT(0.023)EK;LENVSQLSLDKS(0.867)PT(0.132)EK 169.9 1.7028e-28 231325000.0 12706.759999999998 13236.83 12770.7 13165.789999999999 14995.48 13354.83 14669.57 14087.62 14486.600000000002 13861.5 15678.499999999998 True False 13996.740920977692 14352.344118758927 13637.39649845763 13979.010946621449 13942.249216397608 13246.072692259768 15227.828513846709 13806.63136757591 13877.778580508515 12986.282524381615 13750.143894200217 1.0179341415388017 1.0437959216421522 0.9918002752109276 1.0166447023523708 1.0139711499512685 0.9633406598637076 1.1074668476938467 1.0041081368900815 1.0092824254997168 0.9444470271950538 1.0 13.747159095958589 LEPANEEHNVETAEDS(ph)EIR ddPTM_A549_PD325901_60min_R1 2 LEPANEEHNVETAEDSEIR 19 0 Q15361 Q15361 TTF1 Transcription termination factor 1 1 LEPANEEHNVET(0.012)AEDS(0.988)EIR;LEPANEEHNVET(0.03)AEDS(0.97)EIR 98.12100000000001 3.4199e-07 5557100.0 692.3299999999999 963.22 680.22 721.0899999999999 749.88 816.1199999999999 815.62 507.69 590.91 800.44 953.03 True False 762.6148319335913 1044.3939298208843 726.3838196951502 765.6300915857887 697.2110157455606 809.4737893037234 846.6588654243889 497.5637246748996 566.0761076448782 749.9000817960546 835.8133517549273 0.9124224090610138 1.249554015412661 0.8690741996044788 0.9160299844196347 0.8341707084262912 0.9684863104951605 1.012975999541871 0.595304829278191 0.6772757415950684 0.8972099814169231 1.0 9.707036995045199 -5.878398963982669 9.055098332945253 0.8511980187660986 1.0802497172810819 0.25667137275333174 0.1418350577209457 0.2719100909124984 20.22135534088893 0.022245966388708467 0.06949348668989326 1.3231254894493617e-06 5.878398963982669 0.2290516985149833 LEPGGFGEKPVRPGGGDT(ph)SPR ddPTM_A549_MK2206_60min_R1 1 LEPGGFGEKPVRPGGGDTSPR 21 2 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 LEPGGFGEKPVRPGGGDT(0.5)S(0.5)PR 47.806999999999995 0.005202399999999999 7846700.0 1184.0 1112.4 813.97 1028.6 1976.1 1084.9 1099.4 1607.7 1683.9 1915.1 1520.0 True False 1383.8302539792214 1169.0164085554397 929.4031855751603 1280.607046175608 1685.4183077238406 1199.7033979016637 1299.1467491358978 1835.5963983747565 1302.4993386357444 1482.4775799052848 1142.5420501341337 1.2111854034753124 1.0231714521300972 0.8134520611001135 1.1208401879171674 1.4751477265331054 1.0500299728669238 1.1370669018119541 1.6065897952370845 1.140001226635669 1.297525618187307 1.0 10.158031547891692 -4.78821989571969 8.69859960826121 1.11568725336059 7.851778967281974 0.0 0.21782756963397382 289075.01942796604 134565.22726376264 0.02965542339301233 38013007.991163805 1.6284712822654485e-05 4.78821989571969 6.736091713921384 LEPGGFGEKPVRPGGGDT(ph)SPR ddPTM_A549_PD325901_60min_R1 1 LEPGGFGEKPVRPGGGDTSPR 21 2 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 LEPGGFGEKPVRPGGGDT(0.5)S(0.5)PR 56.72 0.0019030000000000002 8823900.0 1612.6 1389.9 1573.9 1899.4 2265.2 1355.6 1640.6 1776.8 1873.1 1615.9 1773.3 True False 1776.309964866625 1507.031750854475 1680.7143186295557 2016.7216241496178 2106.100166515767 1344.5604430477479 1703.033930770767 1741.360330127364 1794.3801208807101 1513.8717982287812 1555.1953418748767 1.1421780383711682 0.9690305200102144 1.0807094603327185 1.2967641876539733 1.3542351303449398 0.864560487576309 1.09506110577573 1.1197052120977 1.153797257852819 0.9734287117936724 1.0 10.60288008756096 -7.258413484405532 24.99952560753443 1.0671061975615732 1.1597364409269073 0.20410460937024688 0.12243574401678252 499.82820199647574 4129500.318367515 0.019122832069594593 0.032234371861866895 5.515520658597209e-08 7.258413484405532 0.0926302433653341 LEPGGFGEKPVRPGGGDTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LEPGGFGEKPVRPGGGDTSPR 21 2 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 LEPGGFGEKPVRPGGGDT(0.435)S(0.565)PR 72.227 9.6305e-05 9946100.0 1453.5 1828.6 1540.5 1804.8 2274.2 1902.6 1555.9 1996.5 1763.3 1885.2 2022.3 True False 1601.058249989853 1982.702539472259 1645.0475937790397 1916.2783970018068 2114.468037564081 1887.105856405019 1615.1106259211494 1956.678241276048 1689.1946330409246 1766.168150269755 1773.5699204159257 0.9027319597382344 1.1179161963951718 0.9275346716487243 1.0804639698402272 1.1922101368680238 1.0640154835071107 0.910655174813962 1.1032427979028767 0.9524262977152804 0.9958266262519636 1.0 10.792440492211131 -7.710467678851863 24.99942705634834 0.9838318613833102 1.0533065525610417 0.08404788945675767 0.08729131743323663 164.08623378208182 80476.68828900521 0.012759773639053555 0.01892578975438054 1.9477460000790633e-08 7.710467678851863 0.06947469117773142 LEPGS(ph)DVEVKDAELDKEGASK ddPTM_A549_MK2206_60min_R1 2 LEPGSDVEVKDAELDKEGASK 21 2 Q9ULI0-2;Q9ULI0;H7BYF1 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 LEPGS(1)DVEVKDAELDKEGASK;LEPGS(1)DVEVKDAELDKEGASK 102.23 2.3866e-10 11844500.0 2441.3 3186.2 2826.1 2634.0 4359.200000000001 3076.3 2408.6000000000004 3304.3 4508.2 4058.2 4275.9 True False 2853.3317559455036 3348.3639706394642 3226.883475747215 3279.330118244753 3717.9674545973207 3401.8320241173305 2846.2114425766063 3772.694643994348 3487.0998981160756 3141.449801457694 3214.0760211635143 0.8877611285972573 1.041781198886309 1.003984801385956 1.020302599145622 1.1567764514951935 1.0584167896831038 0.8855457754687025 1.1738037990242094 1.084946303433646 0.9774037019573889 1.0 11.650188337526538 -4.453763499676509 1.374253769688357 1.0463335912212985 1.0592285876339673e-10 0.23832761828586224 0.0772186715885503 10.564007209130207 3.294509135272717 0.010541469279333762 26.249298191542607 3.517519391635935e-05 4.453763499676509 -1.0463335911153757 LEPGS(ph)DVEVKDAELDKEGASK ddPTM_A549_PD325901_60min_R1 2 LEPGSDVEVKDAELDKEGASK 21 2 Q9ULI0-2;Q9ULI0;H7BYF1 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 LEPGS(1)DVEVKDAELDKEGASK;LEPGS(1)DVEVKDAELDKEGASK 192.01 1.0572e-45 45720000.0 10148.1 10095.9 10055.4 9143.6 11245.2 9829.0 9775.8 9641.7 10980.5 11126.9 11841.599999999999 True False 11178.32764136363 10946.716924564129 10737.819912032306 9708.379405377724 10455.37594583397 9748.95588279456 10147.823418523014 9449.38872973267 10519.027770717337 10424.345635071364 10385.158270087146 1.0763752800533708 1.0540731917485038 1.0339582347012417 0.9348321087547814 1.0067613486401141 0.9387392689887963 0.9771467275325271 0.9098935696483493 1.0128904632118878 1.0037734008442694 1.0 13.342235582610192 -6.027169555887462 6.218164463752441 0.9884879432526796 1.0607073121651334 0.5004415464580145 0.034714726906731136 0.13031861636368364 17.6225536953116 0.005192603179054654 0.01464119166663411 9.393564983509879e-07 6.027169555887462 0.07221936891245373 LEPHEGLLLR ddPTM_A549_PD325901_60min_R1 1 LEPHEGLLLR 10 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5GZI0 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 71.34899999999999 0.0028689 810340.0 124.25 181.76 98.59200000000001 94.42399999999999 151.07 237.02 0.0 235.35 95.05 145.06 175.99 False True 136.8637685319844 197.07755308677542 105.28304600185862 100.25635602753687 140.45936436320713 235.08978770373056 0.0 230.6557596214967 91.05537904527871 135.9008868439055 154.34434569252772 0.8867430025887264 1.2768692769567167 0.6821308907006867 0.6495628691656735 0.9100389375003013 1.5231512800090348 0.0 1.494423126332016 0.5899495613961255 0.8805044735142823 1.0 7.270008821475612 LEPKEES(ph)PTR ddPTM_A549_MK2206_60min_R1 2 LEPKEESPTR 10 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 LEPKEES(0.919)PT(0.081)R;LEPKEES(0.968)PT(0.032)R 94.191 0.00048458 17074900.0 6254.3 7842.6 6455.8 6688.9 8603.8 6885.1 6005.1 6861.6 10285.599999999999 9843.6 9990.0 True False 7309.87293704582 8241.754841547006 7371.329515137074 8327.68080027613 7338.192417384941 7613.676712040513 7096.148938726557 7834.252812768696 7955.92802272808 7619.923923322889 7509.207290026319 0.9734546743375625 1.0975532467313363 0.9816388375544814 1.108995993669918 0.9772259752546025 1.0139121771419135 0.9449930817799659 1.0432862631417965 1.0594897324641832 1.014744117324291 1.0 12.874444902240526 -3.76294231745547 9.46894493039047 1.0244351343158118 1.026478793409229 0.0 0.050319873320380085 0.0 0.0 0.006126768100777686 0.0 0.0001726067131219826 3.76294231745547 0.002043659093417194 LEPKEES(ph)PTR ddPTM_A549_PD325901_60min_R1 3 LEPKEESPTR 10 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 LEPKEES(0.962)PT(0.038)R;LEPKEES(0.842)PT(0.158)R;LEPKEES(0.987)PT(0.013)R 97.95700000000001 0.00041911 236714000.0 13456.800000000001 13379.300000000001 14136.0 13919.900000000001 16141.5 13777.399999999998 14474.2 14879.599999999999 15316.4 15501.4 16394.8 True False 14822.924429627434 14506.82056565743 15095.353966673483 14779.700608613395 15007.776725151973 13665.20142228241 15025.023601586146 14582.81470517962 14672.704972215755 14522.638958514528 14378.343535200025 1.0309201747293781 1.0089354542227258 1.0498673876944256 1.0279139994416462 1.0437764745577969 0.9504016501503283 1.0449759782691912 1.0142207737267526 1.0204725555690817 1.0100356082716517 1.0 13.811609858441777 LEPKEES(ph)PTRINGSIPAGPK ddPTM_A549_PD325901_60min_R1 2 LEPKEESPTRINGSIPAGPK 20 2 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 LEPKEES(0.746)PT(0.103)RINGS(0.151)IPAGPK;LEPKEES(0.931)PT(0.064)RINGS(0.005)IPAGPK 52.321000000000005 0.0038539 12076800.0 5131.6 4695.6 4875.5 5205.4 6854.7 7134.299999999999 6115.7 8315.6 6899.299999999999 6739.799999999999 7297.299999999999 True False 5652.556254315746 5091.314691209635 5206.380748763201 5526.9257356788585 6373.249519431235 7076.200626169625 6348.43631013945 8149.738834537998 6609.346413962032 6314.247877778536 6399.778361396006 0.8832425023360861 0.7955454710620711 0.8135251652101769 0.8636120539763896 0.99585472488785 1.1056946391852964 0.9919775266646333 1.2734407934652703 1.0327461422461373 0.9866353991048508 1.0 12.643806226891641 -6.775269081625017 3.1097420360592216 1.0413607207585713 0.8286516484490316 0.632697914982093 0.07966034660311 0.13249698311617097 2.645047389952048 0.011749014188088328 0.024722599340349472 1.6777641812902733e-07 6.775269081625017 -0.21270907230953973 LEPKEESPT(ph)R ddPTM_A549_PD325901_60min_R1 1 LEPKEESPTR 10 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 LEPKEES(0.289)PT(0.711)R 76.72800000000001 0.00057518 6893800.0 3126.5 3202.0 2729.2 2970.7 3347.7 3104.0 3245.4 3648.9 2566.6 3122.5 3791.6 True False 3443.899978392349 3471.843777419977 2914.4199240128264 3154.1933920507904 3112.569100938033 3078.7220531279186 3368.9054729510212 3576.119826993327 2458.734727591925 2925.344817110815 3325.2572369327145 1.0356792671983095 1.0440827671493098 0.8764494643130668 0.9485562070260414 0.9360385916516735 0.9258598158763185 1.013126273520592 1.075441559009135 0.739411886780799 0.8797348922723383 1.0 11.699250234326248 -8.747105717169237 24.99987245452413 0.8769444839734197 0.9769938105173704 0.272984317399914 0.07875048446501585 326.3094407069671 569128.1091237211 0.018005850895366927 0.02037180530452475 1.7901700328306312e-09 8.747105717169237 0.10004932654395071 LEPNS(ph)PMHGGTLLEDVVGGR ddPTM_A549_MK2206_60min_R1 4 LEPNSPMHGGTLLEDVVGGR 20 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 LEPNS(0.999)PMHGGT(0.001)LLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR 132.84 2.1490000000000002e-17 30690900.0 3225.5 3311.75 2667.02 2774.7400000000002 4556.44 2834.5 3253.0 3258.91 4032.59 4232.3099999999995 5023.7 True False 3769.885544096268 3480.3039293720585 3045.243539679183 3454.5514245628137 3886.1937118795695 3134.444908611177 3844.027992485967 3720.8704724933013 3119.214803722975 3276.2282315330476 3776.1766429334534 0.998334003032152 0.9216475441859755 0.8064356696284053 0.9148278142728008 1.0291345133845888 0.830057808465295 1.0179682668392875 0.9853539239104057 0.8260246007188558 0.8676046015124891 1.0 11.882710537689034 -6.52586878328052 24.994313935143545 0.9302468227292026 0.9018468828718678 0.019302300462396338 0.07920365787969633 375.8861519114224 3142123.9889058564 0.012471568062714275 0.026083834642040733 2.979416487383939e-07 6.52586878328052 -0.0283999398573348 LEPNS(ph)PMHGGTLLEDVVGGR ddPTM_A549_PD325901_60min_R1 6 LEPNSPMHGGTLLEDVVGGR 20 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR 126.59 5.721599999999999e-16 39770500.0 4910.48 4859.51 5525.26 5049.93 5707.93 5045.9400000000005 4879.79 5430.849999999999 5145.93 5938.0 5748.23 True False 5408.988314695684 5269.03796215183 5900.237369687491 5361.852706876844 5307.024688089502 5004.847537616074 5065.493078773546 5322.527436330593 4929.664457553615 5563.073666614583 5041.234151032209 1.072949232796135 1.0451881036061332 1.1703954216209929 1.0635992192068657 1.0527233072486568 0.9927822012773033 1.0048121009686426 1.0557984963346303 0.9778685754051415 1.103514238765427 1.0 12.29956124965958 -7.0057243954213115 2.0125728089567847 0.995997623022062 1.0923016114110653 0.19970577115879673 0.04760066886766185 0.1662384238489963 1.342104865111112 0.005260039061186033 0.010778277764925624 9.869055801858834e-08 7.0057243954213115 0.09630398838900334 LEPQATPGPSQAASAFGAGPTQPPHPVVPS(ph)PVRPSGGRPEGFLGQR ddPTM_A549_PD325901_60min_R1 1 LEPQATPGPSQAASAFGAGPTQPPHPVVPSPVRPSGGRPEGFLGQR 46 2 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LEPQATPGPSQAASAFGAGPT(0.001)QPPHPVVPS(0.767)PVRPS(0.233)GGRPEGFLGQR 81.985 3.8857e-08 6647400.0 893.19 1105.0 909.05 1059.3 1367.0 987.92 1177.6 1047.6 964.05 1032.0 892.27 True False 983.8659912682754 1198.122227997837 970.7435995617245 1124.7305551551483 1270.986635893985 979.8747070638323 1222.4142124074458 1026.7047961736982 923.5343310741819 966.8393438777781 782.5264465655532 1.2572942366183093 1.5310948700281004 1.2405249737210053 1.4373067646358815 1.624209177175091 1.2521937263135643 1.5621378903838015 1.3120384629552453 1.1801956791716128 1.2355356782140203 1.0 9.611995700521867 -9.02201289396887 1.0412483035217466 1.0480104659358327 1.4190886249574775 0.40459572837391133 0.1380977548281874 0.20572904356722593 0.4589568426748912 0.028306288911660257 0.026366749852873222 9.505765711317564e-10 9.02201289396887 0.37107815902164476 LEPSTSTDQPVT(ph)PEPTSQATR ddPTM_A549_MK2206_60min_R1 2 LEPSTSTDQPVTPEPTSQATR 21 0 Q14676;Q14676-2;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 LEPSTST(0.001)DQPVT(0.999)PEPTSQATR;LEPSTSTDQPVT(1)PEPTSQATR 150.69 4.7464999999999995e-22 10360400.0 1761.79 1804.43 2030.8 1646.8 2514.0 2062.1 1826.8400000000001 1588.42 2761.6 3015.0 2992.6000000000004 True False 2059.1370803699765 1896.2677796563216 2318.797976910742 2050.266073927661 2144.1939302756623 2280.3100532888016 2158.75318100002 1813.583399332234 2136.102009369006 2333.9094059915606 2249.4548284417187 0.9153938342457926 0.8429899350190273 1.0308266463465994 0.911450209181554 0.9532060404880526 1.0137167568145644 0.9596783868273847 0.8062324152508414 0.9496087595805439 1.0375444647663126 1.0 11.135359680946706 -9.92473841525941 1.2085966447033487 0.9916706943945085 0.9329140216884504 0.19466074434004355 0.06379371140420662 0.6128413414679551 1.8047160404089553 0.018893364624360778 0.011522609306568926 1.189218303066896e-10 9.92473841525941 -0.05875667270605811 LEPTAPALS(ph)PR ddPTM_A549_MK2206_60min_R1 4 LEPTAPALSPR 11 0 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR 184.34 1.2723999999999999e-18 123431800.0 12092.939999999999 12926.7 11282.46 10274.279999999999 17292.5 11671.8 11147.8 13279.1 17608.1 16204.2 18011.8 True False 14133.932628002942 13584.613815600134 12882.482481079554 12791.479061229948 14748.796157236224 12906.902128886199 13173.210960539516 15161.453090538189 13619.893464357761 12543.659965694336 13538.97295960921 1.0439442245854744 1.0033710722465496 0.9515110577081318 0.9447894681074215 1.0893585651759758 0.9533147135599822 0.9729845092267434 1.1198377554759376 1.005976856958793 0.926485339997045 1.0 13.724830682548264 LEPTAPALS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LEPTAPALSPR 11 0 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 LEPTAPALS(1)PR;LEPTAPALS(1)PR 184.34 1.2723999999999999e-18 215360000.0 7245.900000000001 8037.3 8454.5 7643.6 8413.4 7163.4 7365.0 7772.4 6595.200000000001 7786.6 8798.1 True False 7981.49843385035 8714.6314779068 9028.273211038555 8115.7278121248955 7822.471808654318 7105.063645417698 7645.279105282643 7617.373384670153 6318.0266794258005 7294.9527471305355 7715.989475751053 1.034410228128707 1.1294250083277286 1.170073292532552 1.0518064906166729 1.0138002174883605 0.9208233976661965 0.9908358648374742 0.9872192553669469 0.8188226149454177 0.9454332163174011 1.0 12.913635460281851 -6.930404292194088 1.4678514166268546 0.9233878689272996 1.1133677902676564 0.5956155209354206 0.0580600029930213 0.23341034280849507 1.0038393882938874 0.01181543195366621 0.027670614008924347 1.173804331550861e-07 6.930404292194088 0.1899799213403568 LEPTNVQTVTCS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LEPTNVQTVTCSPR 14 0 J3QLN7;Q99741;J3QR52;J3KTI7 J3QLN7 CDC6 Cell division control protein 6 homolog 1 LEPTNVQT(0.004)VT(0.135)CS(0.861)PR;LEPTNVQTVT(0.082)CS(0.918)PR 138.05 7.8345e-10 6885900.0 3700.1 4147.6 3782.5 3724.6 5203.9 4323.5 2791.5 3349.8 5834.5 5767.5 5766.7 True False 4324.586421240301 4358.695124168053 4318.915377026235 4637.127167203647 4438.413203564645 4781.009900292974 3298.6794162387255 3824.644408332252 4512.995065781965 4464.617744297286 4334.669237176654 0.9976739134211495 1.0055427267172634 0.9963656142398813 1.069776472777424 1.0239335369578426 1.1029699473464416 0.7609991064479211 0.8823382359903886 1.041139431603197 1.0299788749753078 1.0 12.08170619550463 -4.4581841943875915 16.111148010126502 1.0014885975064274 1.0040560715090474 0.0 0.0904236547659819 0.0 0.0 0.011802506616084063 0.0 3.481896084066078e-05 4.4581841943875915 0.0025674740026200293 LEPTNVQTVTCS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LEPTNVQTVTCSPR 14 0 J3QLN7;Q99741;J3QR52;J3KTI7 J3QLN7 CDC6 Cell division control protein 6 homolog 1 LEPTNVQTVT(0.008)CS(0.992)PR 184.99 4.4482e-26 14299000.0 6210.3 7289.8 7019.8 6205.0 6439.2 6559.9 5711.7 6460.7 5652.4 6017.5 6693.6 True False 6840.765084218773 7904.137029555324 7496.205841486602 6588.26875742254 5986.932806034044 6506.478349327914 5929.061869062164 6331.836270178895 5414.849284750486 5637.554023047028 5870.329634226399 1.165311917806854 1.3464553989389292 1.2769650613452244 1.1222996267552448 1.0198631387116324 1.1083667791656042 1.0100049296198517 1.0786168179145723 0.9224097490504999 0.9603470970655216 1.0 12.519225801338381 -6.732666753760988 0.7265518621234575 0.9716186725014796 1.2965188559034315 0.7175639932930048 0.06649045854739209 0.3036108016315186 0.2754376451272722 0.012194856873096434 0.0540292918094207 1.8506881587967735e-07 6.732666753760988 0.3249001834019519 LEPVS(ph)PPS(ph)PPHTDPELELVPPR ddPTM_A549_MK2206_60min_R1 1 LEPVSPPSPPHTDPELELVPPR 22 0 C9J0Q5;C9JE98;C9JQE8;C9J330;H7C1Y3;H0YGK8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 2 LEPVS(0.997)PPS(0.994)PPHT(0.009)DPELELVPPR 50.498999999999995 0.0037671999999999996 2239300.0 245.17 200.8 261.33 222.15 455.97 467.96 128.5 405.35 462.49 366.68 371.46 True False 286.5487021689915 211.0198623138549 298.3905235897596 276.57675997269246 388.8974170198064 517.4792165932921 151.84678666905833 462.80960383231206 357.7367534447682 283.84673332968003 279.216230225543 1.026260908749916 0.75575786602161 1.0686718438563838 0.9905468595048418 1.3928180919342192 1.8533278533819006 0.5438322354914712 1.6575311666462496 1.2812176181728354 1.0165839324612207 1.0 8.125238994450338 -6.59913727664849 8.852600501600312 1.2011179404011092 0.9470853248984394 0.13730132991722288 0.33589333261329996 0.49126286835776234 51.81533388711956 0.04616189103746898 0.09624151042033768 2.5168812380889674e-07 6.59913727664849 -0.25403261550266976 LEPVS(ph)PPS(ph)PPHTDPELELVPPR ddPTM_A549_PD325901_60min_R1 1 LEPVSPPSPPHTDPELELVPPR 22 0 C9J0Q5;C9JE98;C9JQE8;C9J330;H7C1Y3;H0YGK8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 2 LEPVS(1)PPS(0.998)PPHT(0.002)DPELELVPPR 107.58 1.4412000000000002e-10 8760100.0 1817.8 1537.0 1284.4 1733.1 1908.8 1540.7 1752.7 2137.4 1824.6 1722.7 1885.9 True False 2002.3417178063678 1666.5283841019693 1371.5671077246338 1840.1496508443213 1774.7324730025146 1528.153050017456 1819.3999576142403 2094.767880242137 1747.9184072174169 1613.9284280021798 1653.9462557050858 1.210644971624401 1.0076073381184443 0.8292694535832591 1.1125812852122308 1.0730291065267636 0.9239435953534031 1.1000357184149376 1.2665271758477585 1.0568169317401854 0.9758046384126029 1.0 10.691696640158279 LEPVSPPS(ph)PPHTDPELELVPPR ddPTM_A549_MK2206_60min_R1 2 LEPVSPPSPPHTDPELELVPPR 22 0 C9J0Q5;C9JE98;C9JQE8;C9J330;H7C1Y3;H0YGK8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 LEPVS(0.003)PPS(0.997)PPHTDPELELVPPR;LEPVS(0.001)PPS(0.999)PPHTDPELELVPPR 144.29 2.3178e-27 10311700.0 1463.4099999999999 2039.7600000000002 2213.85 1807.75 2994.8 1955.37 1976.64 2316.6000000000004 3056.9 2732.0 2552.8 True False 1710.397831060585 2143.575071480622 2527.807219412963 2250.648831152981 2554.2688871875703 2162.285955530443 2335.769901957411 2644.985144289956 2364.517030866208 2114.839302543595 1918.869306304223 0.8913571265334596 1.1171032151268219 1.3173420467502113 1.1729036593366389 1.3311322864959148 1.1268542096256908 1.2172636741249179 1.378408177982817 1.2322449596217215 1.1021278497683689 1.0 10.906040737952695 -10.664813318196643 1.012910425021055 1.0040380558582107 1.205673230172176 0.14704101519991608 0.12851809707240783 0.5552980275627422 1.0439814591161403 0.07638468280932582 0.02202357248141327 2.1636483697127168e-11 10.664813318196643 0.20163517431396527 LEPVSPPS(ph)PPHTDPELELVPPR ddPTM_A549_PD325901_60min_R1 2 LEPVSPPSPPHTDPELELVPPR 22 0 C9J0Q5;C9JE98;C9JQE8;C9J330;H7C1Y3;H0YGK8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 LEPVSPPS(1)PPHTDPELELVPPR;LEPVS(0.003)PPS(0.997)PPHTDPELELVPPR 165.87 6.240399999999999e-34 16729000.0 4594.7 4717.0 3907.3 4266.3 4634.4 4293.700000000001 3844.6 4865.4 4164.0 4302.8 5045.799999999999 True False 5061.150561560635 5114.518144312941 4172.472874503631 4529.8196615297 4308.895731812054 4258.7335307717 3990.9083568458427 4768.355780167536 3989.0015607000582 4031.120473679558 4425.1985879615695 1.1437115105588993 1.1557714400042103 0.9428894074617441 1.0236421194413161 0.9737180481649097 0.9623824662597685 0.9018597194039649 1.0775461677899612 0.9014288243587184 0.9109467956186029 1.0 12.111526484589614 -5.758710127361258 24.99717455263965 0.9635163484351483 1.149741552379376 0.6556323115059782 0.051321168163186395 29.725000543835947 272234.26835937036 0.00709381167293763 0.025208410333031023 1.7429698416382788e-06 5.758710127361258 0.1862252039442276 LEPVYS(ph)PPGSPPPGDPR ddPTM_A549_MK2206_60min_R1 2 LEPVYSPPGSPPPGDPR 17 0 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 LEPVYS(0.5)PPGS(0.5)PPPGDPR;LEPVY(0.001)S(0.5)PPGS(0.5)PPPGDPR 88.73 7.0352e-06 79612000.0 6754.2 8565.3 6654.8 6142.5 10039.7 6687.7 7335.299999999999 7283.3 10503.9 9854.2 10594.400000000001 True False 7894.143835664242 9001.23718464572 7598.550707477645 7647.412775747299 8562.873429510173 7395.387975064024 8668.029060338858 8315.730079170788 8124.783421281547 7628.129375960874 7963.518089434917 0.9912884917204229 1.1303091276439154 0.9541700818836001 0.9603058208523454 1.07526263309057 0.9286584009742349 1.0884673033942882 1.044228189825191 1.020250513659356 0.9578843534092052 1.0 12.959190203985392 -10.300808647884807 1.0847009317625655 1.0018387952699646 1.0218621005161848 0.045064591530946996 0.05993925571559405 1.9007982503798198 4.414837415842059 0.022522732744318846 0.009945088690431718 5.002549010007927e-11 10.300808647884807 0.020023305246220202 LEPVYS(ph)PPGSPPPGDPR ddPTM_A549_PD325901_60min_R1 1 LEPVYSPPGSPPPGDPR 17 0 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 LEPVYS(0.807)PPGS(0.193)PPPGDPR 143.38 3.0586e-16 23157000.0 2932.9 3284.1 2659.9 2986.8 4429.6 3363.1 3184.1 3637.7 4017.1 3824.1 4155.7 True False 3230.6458489131364 3560.8626325499513 2840.416809278071 3171.2878524850366 4118.480177290411 3335.7120286322524 3305.2726679063744 3565.143219779557 3848.2752568415467 3582.6456733750097 3644.5752451527796 0.8864258882320616 0.9770309001812585 0.7793546897010221 0.8701392176503402 1.13003022307412 0.9152539882579431 0.9069020243997784 0.9782054094015851 1.0558912899273198 0.9830077395547986 1.0 11.83153497097863 -7.203260554084116 0.5658974600706272 1.0238013534191028 0.880438940563912 0.18767267641163032 0.0820886867821763 0.964419253073256 0.5669964769932401 0.018578211840013976 0.06149128542394585 6.2623804171716e-08 7.203260554084116 -0.1433624128551908 LEPVYSPPGS(ph)PPPGDPR ddPTM_A549_PD325901_60min_R1 1 LEPVYSPPGSPPPGDPR 17 0 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 LEPVYS(0.158)PPGS(0.842)PPPGDPR 119.45 1.0207e-09 21398000.0 3623.0 3558.0 3221.5 3867.1 4638.4 4719.3 3819.3 4302.5 4072.8 4265.2 4811.2 True False 3990.804292888368 3857.8451468020858 3440.130362453216 4105.961984178681 4312.614785611305 4680.867585478928 3964.645551501151 4216.683262254046 3901.634379543516 3995.8945440964153 4219.452900709638 0.9458108401250751 0.9142998482465022 0.8153024677380915 0.97310293082976 1.0220791384793035 1.1093541498452768 0.9396112825040345 0.9993436024715132 0.9246777891245875 0.9470172171904978 1.0 12.042840234162915 -6.470474018773958 20.688356159071336 0.9796084299197093 0.8940780668551574 0.36803396818218836 0.05593269953337432 49.49555993040415 19539.060873599356 0.008371182907999906 0.01945207788625858 3.384745201548411e-07 6.470474018773958 -0.08553036306455186 LEQEEQQR ddPTM_A549_PD325901_60min_R1 1 LEQEEQQR 8 0 M0R0C3;M0R2F8;Q3ZCQ8-3;Q3ZCQ8;Q3ZCQ8-2 M0R0C3 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 0 56.563 0.051298 1158100.0 496.43 676.12 528.21 377.27 734.38 815.8 709.94 700.36 705.92 639.45 815.51 False True 546.8272081475495 733.0990052433467 564.0575069847625 400.57311105766354 682.7996822734628 809.1563952776276 736.9571551940747 686.3907703782091 676.2526373029261 599.0750178707804 715.2074399438225 0.7645714762006688 1.0250159104901504 0.7886628067362773 0.5600796198220861 0.954687611089581 1.1313590296840097 1.0304103593384888 0.9597086552009627 0.9455335606632446 0.8376241414908044 1.0 9.482217934006007 -6.973545454761214 24.99461384443803 0.9892041136326591 0.7964646465387303 0.38225654036166734 0.11945623670125376 171.34912561969776 161892.23486956948 0.016015275800551974 0.030265498117915113 1.0628073403654014e-07 6.973545454761214 -0.19273946709392886 LEQLCEEFS(ph)EEER ddPTM_A549_MK2206_60min_R1 2 LEQLCEEFSEEER 13 0 Q9H3C7-3;Q9H3C7 Q9H3C7-3 GGNBP2 Gametogenetin-binding protein 2 1 LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER 120.7 1.0133e-05 7934900.0 1605.92 2260.03 2063.46 1862.54 3197.2 1961.72 2008.33 2071.6 3118.0 3039.7 2975.7 True False 1876.960035025602 2375.0558736313815 2356.08965601548 2318.8623836125976 2726.896115305231 2169.307908315653 2373.217564755408 2365.255644008923 2411.7779784228587 2353.0296588366646 2236.7515648579883 0.8391455110683115 1.0618326643630511 1.0533533062108615 1.0367098519320015 1.2191323158762881 0.9698474977722359 1.061010798893119 1.057451207889998 1.0782502698622154 1.051985252097525 1.0 11.127189310370161 -5.259402002293327 24.479159591447736 1.049750357428529 0.8391454151502619 0.5255913670356744 0.0594537048828269 84.29031842981432 1012647.6812180699 0.00800096555705922 0.07271106582483412 5.502980801954027e-06 5.259402002293327 -0.2106049422782671 LEQLCEEFS(ph)EEER ddPTM_A549_PD325901_60min_R1 2 LEQLCEEFSEEER 13 0 Q9H3C7-3;Q9H3C7 Q9H3C7-3 GGNBP2 Gametogenetin-binding protein 2 1 LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER 170.49 1.153e-21 15776000.0 3430.4 3417.0 3520.0 3372.0 3295.4 2761.8 3413.7 3696.9 3079.8 3672.5 3992.8999999999996 True False 3778.651682672993 3704.9625819625408 3758.8883674795343 3580.2807816323643 3063.942472512828 2739.308816471872 3543.610221548315 3623.1624293380555 2950.3667162929987 3440.617723247229 3501.7986130785484 1.0790602487991319 1.0580170339108634 1.0734164875846386 1.0224119594601186 0.8749625010043662 0.7822576678856051 1.0119400379889376 1.0346575659166226 0.8425289522001473 0.982528724066878 1.0 11.77388040205231 -6.590158426963431 5.035053488713733 0.925292412903254 1.0661419320273875 0.413277278014359 0.07297545694545614 0.16403836742906344 7.992378406013297 0.011854443967862038 0.025293971138549778 2.5694582950745346e-07 6.590158426963431 0.14084951912413346 LEQLCEEFS(ph)EEERVR ddPTM_A549_PD325901_60min_R1 2 LEQLCEEFSEEERVR 15 1 Q9H3C7-3;Q9H3C7 Q9H3C7-3 GGNBP2 Gametogenetin-binding protein 2 1 LEQLCEEFS(1)EEERVR;LEQLCEEFS(1)EEERVR 93.20100000000001 7.0162e-06 22993000.0 11820.0 10422.0 12544.599999999999 11190.6 11948.7 12790.900000000001 11445.0 11391.2 17618.5 14301.400000000001 19095.1 True False 13019.957698575905 11300.298516012188 13395.951992807884 11881.817946303416 11109.46453277722 12686.735151209386 11880.545737944303 11163.99357977648 16878.05571498415 13398.407163307815 16746.52375381208 0.7774722617051865 0.6747847303796322 0.7999243418956433 0.7095095149880709 0.6633892917775445 0.7575742487046874 0.7094335464839314 0.6666454330401063 1.0078542844536396 0.800070949665472 1.0 14.031574031321387 -8.767481921259556 24.999997918805434 1.0037089925561582 0.7196938535143669 0.5913525430472835 0.07441882823984448 26.00422135115494 107587.78924754096 0.00675012735204295 0.007276747046020751 1.7081188238738554e-09 8.767481921259556 -0.2840151390417913 LEQLESGEEELVLAEYES(ph)DEEKK ddPTM_A549_PD325901_60min_R1 1 LEQLESGEEELVLAEYESDEEKK 23 1 F5GXJ8;F6WZM0;F5H235;C9K0E8;B4DMS8;Q96FC9-5;Q96FC9-4;Q96FC9-3;Q96FC9-2;A8MPP1;Q96FC9 F5GXJ8 DDX11;DDX11L8 Probable ATP-dependent RNA helicase DDX11;Putative ATP-dependent RNA helicase DDX11-like protein 8 1 LEQLESGEEELVLAEYES(1)DEEKK 193.9 2.2150999999999995e-51 10881000.0 4830.1 4860.3 4827.9 4306.5 5364.2 4460.7 4494.2 4556.7 5270.1 4953.2 5210.0 True False 5320.448196268313 5269.894538224332 5155.550326521147 4572.502724228875 4987.437097485378 4424.373538140372 4665.229240320601 4465.813043838002 5048.616024266422 4640.454106681598 4569.203028911131 1.1644149236975816 1.1533509246316376 1.1283259452250136 1.0007221599252356 1.091533264319383 0.9683031176652983 1.0210159651041713 0.9773724248148004 1.1049226730179986 1.015593764890646 1.0 12.157726833642146 -6.115435335245886 4.507817242614108 1.0380243330654022 1.1553722041235843 0.6281382535639723 0.04234082759945783 0.1397261469382966 4.533244819669773 0.006904041105680043 0.01933263254315091 7.6659267432394e-07 6.115435335245886 0.11734787105818212 LEQTSVR ddPTM_A549_MK2206_60min_R1 1 LEQTSVR 7 0 O15234 O15234 CASC3 Protein CASC3 0 74.335 0.051609 19994000.0 3062.3 3928.1 3132.8 2544.0 4624.6 2904.1 3226.4 2941.3 4403.5 4330.4 4339.3 False True 3579.141373953185 4128.023511728356 3577.078147560554 3167.2801142044987 3944.327466170574 3211.4099344144365 3812.595116801946 3358.2382823534704 3406.1142809445314 3352.1596324065845 3261.7320514125336 1.0973131200041994 1.265592466413869 1.0966805645520317 0.971042398419229 1.2092739084629696 0.9845719647705873 1.1688866702434537 1.0295874184083096 1.044265509016742 1.0277237920125566 1.0 11.671422555376495 -2.000000001043546 0.12143281805573022 0.965955351675369 1.6136109771509672 0.22039086971073651 0.08142369015778546 73.39655639498723 0.5890105891600947 0.25737528294366613 8.10707650407491 0.009999999975971462 2.000000001043546 0.6476556254755983 LEQTSVRDPS(ph)PEADAPVLGS(ph)PEKEEAASEPPAAAPDAAPPPPDRPIEK ddPTM_A549_PD325901_60min_R1 1 LEQTSVRDPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 48 3 O15234 O15234 CASC3 Protein CASC3 2 LEQT(0.392)S(0.114)VRDPS(0.494)PEADAPVLGS(0.939)PEKEEAAS(0.06)EPPAAAPDAAPPPPDRPIEK 68.975 1.352e-05 26004000.0 723.14 713.05 912.94 802.62 1002.3 882.58 913.27 1122.3 798.93 781.55 972.05 True False 796.552640452468 773.1412259491925 974.8975983541945 852.1960145177248 931.9019057472863 875.3925610984659 948.0249896105202 1099.9148460726815 765.3537504539137 732.2027996198424 852.4940123326419 0.9343791615297051 0.9069168988456355 1.14358292756406 0.9996504399906556 1.0931477432872099 1.0268606564205274 1.1120605844684832 1.290231755485335 0.8977819660688406 0.8588949470933503 1.0 9.735545890881223 LEQTSVRDPS(ph)PEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK ddPTM_A549_MK2206_60min_R1 1 LEQTSVRDPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 48 3 O15234 O15234 CASC3 Protein CASC3 1 LEQT(0.047)S(0.047)VRDPS(0.905)PEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 128.86 2.4954e-33 48114000.0 1350.4 1530.6 1294.3 1298.0 1303.2 1609.2 1297.6 1409.8 1782.1 1683.0 1594.2 True False 1578.3145058898144 1608.5010022788158 1477.8512022432406 1616.0100582694347 1111.5010063386017 1779.484475899492 1533.3571235935426 1609.643467331425 1378.4571954289206 1302.8091311057367 1198.3161423183142 1.3171102767891776 1.3423010384946832 1.2332732156842399 1.3485673781737029 0.9275523938017256 1.484987486237834 1.2795931469528932 1.3432544305189273 1.1503284874074198 1.0871998507716552 1.0 10.226792857885046 -9.375056393299287 1.0336983943851992 1.0326148596062734 1.2809991280942947 0.31773574942445415 0.1331092144962255 0.32111858565710816 0.7208431054545562 0.03363840237557109 0.026210856405011664 4.2164174953644834e-10 9.375056393299287 0.2483842684880213 LEQTSVRDPS(ph)PEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK ddPTM_A549_PD325901_60min_R1 2 LEQTSVRDPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 48 3 O15234 O15234 CASC3 Protein CASC3 1 LEQT(0.084)S(0.076)VRDPS(0.803)PEADAPVLGS(0.008)PEKEEAAS(0.028)EPPAAAPDAAPPPPDRPIEK;LEQT(0.227)S(0.205)VRDPS(0.563)PEADAPVLGS(0.002)PEKEEAAS(0.002)EPPAAAPDAAPPPPDRPIEK 59.534 4.8906e-05 81728000.0 2334.5 2512.8 3229.6 2695.35 3165.8 2549.2 2430.8 3055.9 2609.0 2339.31 3075.2 True False 2571.4967214319317 2724.5624746723656 3448.7800771624725 2861.83564791601 2943.4451294171 2528.4401603845654 2523.3054241847994 2994.947677192826 2499.352803041895 2191.605567370857 2696.969895298945 0.9534762423244976 1.0102309556445241 1.2787610581690207 1.0611299936660177 1.0913896868288306 0.9375114512000516 0.9356075603895846 1.1104861357233844 0.9267262520795972 0.8126177348849972 1.0 11.397123702362663 -7.2519090596555 23.819685278717316 0.972457951762168 1.0852825564584245 0.26693011724135285 0.10049426119009551 371.4202162258367 928310.5203324284 0.01298801576242177 0.02229338121873455 5.598748258239066e-08 7.2519090596555 0.11282460469625655 LEQYHRK ddPTM_A549_MK2206_60min_R1 1 LEQYHRK 7 1 G3V207;Q9ULS5;F8VQF2 G3V207 TMCC3 Transmembrane and coiled-coil domains protein 3 0 47.907 0.047789 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LERLVPT(ph)AVY(ph)QHMKMHKR ddPTM_A549_MK2206_60min_R1 2 LERLVPTAVYQHMKMHKR 18 3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 2 LERLVPT(1)AVY(1)QHMKMHKR;LERLVPT(1)AVY(1)QHMKMHKR 44.105 0.0086693 893650000.0 8993.0 12785.0 15713.5 13413.1 22475.2 17146.9 18878.5 18565.4 30298.0 21881.8 22136.3 True False 10510.79854225941 13435.701890849776 17941.910582128687 16699.31010213694 19169.1278527174 18961.37357680897 22308.479082737886 21197.10230415296 23435.55137596401 16938.686182429894 16639.24577920015 0.6316871979497056 0.8074706070899585 1.0782886929019901 1.003609798408764 1.1520430737719929 1.1395572749163658 1.3407145599486574 1.2739220626604568 1.408450340054449 1.0179960322242525 1.0 14.022302420283975 -5.332984544049161 0.7402650831284063 1.2104185361679678 0.3020067527912507 0.6759702226286424 0.12298561668784672 1.3158087571104293 0.5350949758575383 0.025364227592385383 0.9689623041505673 4.6453180698475255e-06 5.332984544049161 -0.9084117833767171 LERT(ph)PNGPNIDKK ddPTM_A549_MK2206_60min_R1 2 LERTPNGPNIDKK 13 2 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4;Q5TBM3 A0A0A0MSM0 HSPH1 Heat shock protein 105 kDa 1 LERT(1)PNGPNIDKK;LERT(1)PNGPNIDKK 73.46600000000001 0.00042199999999999996 13931000.0 5826.9 5299.3 5587.9 5336.7 9322.2 6381.5 5188.7 7017.799999999999 9841.7 7641.900000000001 6811.5 True False 6810.338265972574 5569.011734859622 6380.348244622582 6644.1917395735645 7950.916729043672 7056.786094303132 6131.419626379325 8012.594641111138 7612.570663965438 5915.589482469947 5120.0165621635915 1.3301398898394763 1.0876940859945767 1.2461577354598254 1.2976895013726077 1.5529084002970124 1.378274075605941 1.197539021980886 1.5649548285299326 1.486825398226555 1.1553848333588528 1.0 12.321932761706236 -10.908926290763759 1.1858772110984808 1.0017531132916444 1.3569108912748475 0.32541761443284045 0.1455593829222726 0.35999817195759 0.9064394429146598 0.10284734570865806 0.02495760801367763 1.2333141357478134e-11 10.908926290763759 0.35515777798320314 LERT(ph)PNGPNIDKK ddPTM_A549_PD325901_60min_R1 2 LERTPNGPNIDKK 13 2 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4;Q5TBM3 A0A0A0MSM0 HSPH1 Heat shock protein 105 kDa 1 LERT(1)PNGPNIDKK;LERT(1)PNGPNIDKK 76.262 0.00034765 20656700.0 6012.9 6869.1 6009.2 6728.700000000001 8735.599999999999 7676.2 7361.8 7431.1 8080.3 7723.2 8608.400000000001 True False 6623.325181536973 7447.9831641085475 6417.020448255116 7144.316517013544 8122.041592183971 7613.687572235996 7641.957327531535 7282.880880914822 7740.71309100017 7235.555833950443 7549.6213731436765 0.8773056096691387 0.9865373104144418 0.8499791090295509 0.9463145453132357 1.0758210499239829 1.0084860148510524 1.0122305410859842 0.9646683616243681 1.0253114306548228 0.9583998291211715 1.0 12.882188577207716 -6.535250253976209 21.13921064247863 1.0119768077863096 0.9103580793394698 0.5258361481581684 0.042703561848232444 16.78825429259041 28686.004018416177 0.005122255938546771 0.010675439309642194 2.9157463861579126e-07 6.535250253976209 -0.10161872844683983 LERT(ph)PQK ddPTM_A549_MK2206_60min_R1 2 LERTPQK 7 1 P35251-2;P35251 P35251-2 RFC1 Replication factor C subunit 1 1 LERT(1)PQK;LERT(1)PQK 91.867 0.004889899999999999 260630000.0 9628.6 10660.2 9639.9 8424.2 9707.7 9937.3 9881.1 9776.5 10247.5 13893.9 13976.6 True False 11253.672283331369 11202.758646604369 11006.982774089936 10488.129378176713 8279.710189712434 10988.858490154118 11676.367966969907 11162.34881427556 7926.457611894879 10755.25834026737 10505.824485463649 1.0711841130510487 1.0663378835335608 1.0477028994078204 0.9983156859976654 0.7881066546627187 1.0459777340996719 1.1114185262780543 1.0624914617334706 0.7544822039300483 1.023742434984408 1.0 13.358901767111469 -8.734893504705443 24.999928283324856 0.8840609970874567 1.0210821575641955 0.11437424096569304 0.10457772785269533 249.0175924564825 234515.54213762493 0.020151817811335262 0.022846820021039688 1.8412234407613614e-09 8.734893504705443 0.13702116047673885 LERT(ph)PQK ddPTM_A549_PD325901_60min_R1 4 LERTPQK 7 1 P35251-2;P35251 P35251-2 RFC1 Replication factor C subunit 1 1 LERT(1)PQK;LERT(1)PQK;LERT(1)PQK;LERT(1)PQK 65.22399999999999 0.0099731 440100000.0 23361.399999999998 22170.9 23697.6 23898.2 28485.0 26040.6 22926.4 24670.9 25599.699999999997 26021.8 28584.0 True False 25733.032130246276 24039.31955178033 25305.861641245174 25374.33753724986 26484.311867915236 25828.533987333423 23798.876697807464 24178.81954555336 24523.833634354763 24378.779107091836 25068.349208905114 1.0265148261579604 0.9589510402719602 1.0094745940532728 1.012206161873477 1.0564840806712203 1.0303244849548476 0.9493595489468173 0.964515826074588 0.9782787621948029 0.9724924008331461 1.0 14.613579375061544 -7.735079920425726 24.999477300687495 0.9844354328490538 1.0144991541543598 0.37045500087910055 0.02580267505209911 268.3089483670771 254465.37563577422 0.00423410954612849 0.006279246194153698 1.840433287180286e-08 7.735079920425726 0.03006372130530599 LERT(ph)PQKNVQGK ddPTM_A549_MK2206_60min_R1 2 LERTPQKNVQGK 12 2 P35251-2;P35251 P35251-2 RFC1 Replication factor C subunit 1 1 LERT(1)PQKNVQGK;LERT(1)PQKNVQGK 66.059 0.0019125999999999998 44781000.0 8409.9 10532.599999999999 10545.9 9994.7 15283.5 10836.400000000001 9281.4 9156.0 16040.4 17274.1 16687.1 True False 9829.285517685685 11068.664351628033 12041.467197509844 12443.401948679131 13035.317395930031 11983.100655379843 10967.710239612436 10453.891039074006 12407.275011255288 13371.868812616514 12543.23252946928 0.7836325679678342 0.8824411351398556 0.9599971274724773 0.9920410802753113 1.0392311045262566 0.955343897773285 0.8743926427134883 0.8334287843674635 0.9891608867256051 1.0660624190136332 1.0 13.614621574041756 -5.46684905732619 1.9639972213644181 0.9749811210746434 0.7655393785448381 0.4363218383435786 0.06338705680253666 0.3472790078983681 1.9095870263253336 0.008951747784727234 0.1121465027525289 3.4131151667742713e-06 5.46684905732619 -0.2094417425298053 LERT(ph)PQKNVQGK ddPTM_A549_PD325901_60min_R1 2 LERTPQKNVQGK 12 2 P35251-2;P35251 P35251-2 RFC1 Replication factor C subunit 1 1 LERT(1)PQKNVQGK;LERT(1)PQKNVQGK 90.65299999999999 9.3911e-05 75290000.0 13813.0 14890.199999999999 14268.6 15103.5 15925.6 21256.7 17963.1 19016.4 17225.800000000003 18234.300000000003 18019.300000000003 True False 15215.285591406842 16145.049411161435 15236.953000062065 16036.408892462749 14807.040796337416 21083.59248283643 18646.695600285482 18637.102983922792 16501.859530333117 17082.9831861149 15803.040333753988 0.9628074895758033 1.0216419796560883 0.9641785807201411 1.0147673203244507 0.9369741824116465 1.3341478625352627 1.1799435555737765 1.179336544760661 1.0442205538820595 1.0809934560267531 1.0 13.947914523550981 LERT(ph)SPCQDSSVNYGITK ddPTM_A549_PD325901_60min_R1 2 LERTSPCQDSSVNYGITK 18 1 Q15699 Q15699 ALX1 ALX homeobox protein 1 1 LERT(0.499)S(0.499)PCQDS(0.001)SVNYGITK;LERT(0.494)S(0.494)PCQDS(0.011)S(0.001)VNYGITK 145.13 3.5426999999999995e-17 7446800.0 2447.3 3211.1 3698.7 3439.0 3194.7 2951.1 3149.7 3474.7 3162.4 3045.2 4241.1 True False 2695.74809439296 3481.710666356429 3949.7160240899275 3651.419219464323 2970.3152931166856 2927.067220034085 3269.5635570819745 3405.3943826505806 3029.4953255422347 2852.925552302916 3719.471586547984 0.7247664168594619 0.9360766940520658 1.0619024590414017 0.9817037540144729 0.7985852893349872 0.7869578115935215 0.87903979933785 0.9155586495045936 0.81449616028762 0.7670244242813794 1.0 11.860881961475027 -4.136063192029406 19.999347245325758 0.9010959994598694 0.8938725146385843 0.0 0.10624176323147975 0.0 0.0 0.014042222132507918 0.0 7.310327068122234e-05 4.136063192029406 -0.007223484821285098 LES(ph)EGSPETLTNLR ddPTM_A549_MK2206_60min_R1 1 LESEGSPETLTNLR 14 0 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LES(0.982)EGS(0.018)PETLTNLR 302.2 1.6987999999999994e-135 14107000.0 4105.3 3612.2 3444.4 2842.2 5367.9 4091.6 4067.2 4943.1 5995.6 4931.9 5611.7 True False 4798.174275051438 3796.045551046349 3932.8677130546384 3538.5391275912084 4578.289020814134 4524.570396215732 4806.157593310461 5643.799562608859 4637.606173005802 3817.780364646688 4218.160014959029 1.1375040913657808 0.8999292434578777 0.932365699524758 0.8388821464909691 1.0853758521672876 1.072640767578771 1.139396698149476 1.3379766397182724 1.0994381807611078 0.9050819198673218 1.0 12.042398109146259 -6.7978186933517355 24.691430659888326 1.0816552648230127 0.9470241540930713 0.23550942488468452 0.11973527654882579 168.26129131982952 114202.11572689816 0.016860569905741106 0.03186424119560483 1.5928735715422706e-07 6.7978186933517355 -0.13463111072994138 LES(ph)EGSPETLTNLR ddPTM_A549_PD325901_60min_R1 1 LESEGSPETLTNLR 14 0 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LES(0.689)EGS(0.311)PET(0.001)LTNLR 265.12 1.691e-83 23657000.0 4247.9 5014.6 3957.4 4361.2 5095.7 4600.0 4056.8 4834.8 4940.1 4938.3 5425.7 True False 4679.143680861299 5437.197940740231 4225.9729617794055 4630.581418996161 4737.795611210662 4562.5391251251385 4211.183743966141 4738.366121172771 4732.484776660513 4626.494895224448 4758.373296346086 0.9833494325580494 1.1426589723247247 0.8881129534382042 0.9731437889818239 0.9956754790232146 0.9588443026587832 0.8850049127503034 0.9957953750310683 0.9945593760570544 0.9722849820919038 1.0 12.216252740885388 -4.058774783532277 9.995147190111794 0.988368532404666 0.9869308768136539 0.0 0.06481461029513864 0.0 0.0 0.007911640384642572 0.0 8.73424191353619e-05 4.058774783532277 -0.0014376555910121658 LES(ph)EGSPETLTNLRK ddPTM_A549_MK2206_60min_R1 1 LESEGSPETLTNLRK 15 1 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LES(1)EGSPETLTNLRK 113.88 9.9405e-15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LES(ph)EGSPETLTNLRK ddPTM_A549_PD325901_60min_R1 2 LESEGSPETLTNLRK 15 1 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LES(0.977)EGS(0.022)PET(0.002)LTNLRK;LES(1)EGSPETLTNLRK 193.32 1.152e-34 32463000.0 6280.6 7139.9 7429.799999999999 7188.8 7862.099999999999 7527.4 7249.6 7852.5 8205.5 8258.5 8609.4 True False 6918.201888466648 7741.604430481233 7934.030907016882 7632.835849050635 7309.893218772558 7466.099350101519 7525.487495133334 7695.875727332919 7860.651370394897 7737.056900595571 7550.498379483196 0.9162576482719772 1.0253103889827095 1.0507956572212307 1.01090490526972 0.9681338702933266 0.9888220584735158 0.9966875187447463 1.0192540068937375 1.0410771548212596 1.0247081069005068 1.0 12.88235615901753 -8.264864324088075 8.0941557621011 1.0199387958523096 0.9967070822816071 0.1319543137487007 0.03325306470800293 0.24320132948184978 171.08186353425202 0.0056340727409598884 0.0070135208387293434 5.434200723053399e-09 8.264864324088075 -0.023231713570702528 LES(ph)LNIQR ddPTM_A549_MK2206_60min_R1 2 LESLNIQR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LES(1)LNIQR;LES(1)LNIQR 137.98 0.0010892 88053000.0 2425.11 2978.8 2562.8 2626.7 4362.9 3995.3 3653.9 4235.1 6036.2 5888.8 6122.8 True False 2834.409279752998 3130.4081965164887 2926.243576534787 3270.2416179170427 3721.1231894986818 4418.079994134499 4317.766333152312 4835.438394449792 4669.0103378306785 4558.515990050778 4602.3397793166305 0.6158626732626551 0.6801775502506034 0.6358165013555962 0.7105606658191191 0.808528567625923 0.9599638892351641 0.938167658232619 1.0506478500741578 1.0144862312890657 0.990477932667466 1.0 12.168151782748124 -7.038298158083638 1.2243501164457582 1.0087667107134024 0.6400108025097014 0.9710693475681648 0.027129278650940322 0.04466147968462164 0.13192675177283206 0.003944790493778828 0.009376102256552178 9.15591689146784e-08 7.038298158083638 -0.36875590820370097 LES(ph)LNIQR ddPTM_A549_PD325901_60min_R1 2 LESLNIQR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LES(1)LNIQR;LES(1)LNIQR 114.4 0.0013273 185413000.0 2032.49 2758.7 2445.5699999999997 2191.98 2508.2 2226.09 2677.6000000000004 2899.0 2652.46 2498.19 2601.8 True False 2238.8268885599437 2991.1853306584917 2611.5410866070797 2327.3736262522257 2332.0326848202567 2207.9614610977865 2779.4975332389404 2841.1771707784965 2540.986330378118 2340.453857056227 2281.7950941690938 0.9811691217502609 1.310891297076664 1.1445116580715857 1.019974857602071 1.0220166967575397 0.9676423035267356 1.2181188137101693 1.245150004064278 1.1135909341164605 1.0257072876688316 1.0 11.15595352769143 -10.42803386777242 1.0076622310636427 1.0064070379653152 1.1155950445653993 0.11485931965878693 0.10654253152738032 0.7900389721032061 1.5458236415975632 0.053054190595879604 0.01973851975638487 3.732210516038636e-11 10.42803386777242 0.1091880066000841 LES(ph)PVAH ddPTM_A549_MK2206_60min_R1 4 LESPVAH 7 0 Q86TM6-2;Q86TM6-3;Q86TM6 Q86TM6-2 SYVN1 E3 ubiquitin-protein ligase synoviolin 1 LES(1)PVAH;LES(1)PVAH;LES(1)PVAH;LES(1)PVAH 106.14 0.0096119 24386900.0 3470.8099999999995 3308.4599999999996 2714.41 2972.57 4489.51 3687.7200000000003 3155.6 3171.7 4506.02 4894.360000000001 4662.47 True False 4056.597874842586 3476.8464824247817 3099.3541542772723 3700.8497834437385 3829.1090262179373 4077.952082689578 3728.93167325199 3621.298187923879 3485.413664635333 3788.720676719352 3504.6500213742747 1.1574901488314306 0.992066671770384 0.8843548244118041 1.0559826975226838 1.0925795736706494 1.1635832559082449 1.0639954490490802 1.0332838274401686 0.9945111903837409 1.0810553560591152 1.0 11.775054666804548 -8.607545427174587 3.586224649394267 0.9974022728437677 1.0543397417488103 0.0012617814192036336 0.07624645400414864 0.4187706457074962 10.676830558897986 0.013042487995832776 0.014870678666393033 2.468621873713378e-09 8.607545427174587 0.05693746890504259 LES(ph)PVAH ddPTM_A549_PD325901_60min_R1 4 LESPVAH 7 0 Q86TM6-2;Q86TM6-3;Q86TM6 Q86TM6-2 SYVN1 E3 ubiquitin-protein ligase synoviolin 1 LES(1)PVAH;LES(1)PVAH;LES(1)PVAH;LES(1)PVAH 95.352 0.011906 32261000.0 4420.76 4417.85 4429.91 4094.63 4468.64 4313.780000000001 4330.96 4798.6 5113.83 5298.87 5503.98 True False 4869.552300808493 4790.157723945921 4730.550331812855 4347.545995520561 4154.778142371101 4278.650005909201 4495.777052792247 4702.888158571126 4898.913508922856 4964.298443889188 4827.02535260389 1.0088101770962654 0.992362246732746 0.980013566587341 0.9006677359122055 0.8607326125042721 0.8863947655881126 0.9313763082613696 0.9742828792134272 1.0148928483004935 1.0284384442296843 1.0 12.236918688817681 -8.485291080252168 3.251514686998258 1.0069103045697005 0.9348700310165932 0.3782418259272259 0.04313208750060494 0.22356718402701442 4.8023390068592695 0.008129057866494946 0.00965548529767807 3.2712137252451336e-09 8.485291080252168 -0.07204027355310738 LES(ph)SGAGGR ddPTM_A549_MK2206_60min_R1 1 LESSGAGGR 9 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LES(0.976)S(0.024)GAGGR 58.37 0.011534 1673200.0 552.82 599.89 600.93 317.51 734.62 733.01 496.6 296.03 1102.3 1007.8 1069.4 True False 646.122500848643 630.4218386626418 686.1509101166887 395.29996425356546 626.5583711452298 810.5766316673416 586.8257919054817 337.9931590538527 852.6308100113911 780.1372800525016 803.8384660614759 0.8037964443458581 0.7842643332950783 0.8535930278114028 0.4917654242031928 0.7794580597954514 1.0083824871418263 0.730029498066596 0.42047397994014846 1.0606991902104168 0.9705149890063092 1.0 9.650761806072001 -8.858177930180805 22.58032881712265 1.0286712340489246 0.7418846750106105 0.38691407002461864 0.15426873171867078 4.907684807863369 1139.2861302011638 0.026388645183308503 0.028092701848519787 1.3861877922360078e-09 8.858177930180805 -0.28678655903831407 LES(ph)SPR ddPTM_A549_PD325901_60min_R1 2 LESSPR 6 0 Q9HCM1 Q9HCM1 KIAA1551 Uncharacterized protein KIAA1551 1 LES(0.562)S(0.438)PR;LES(0.918)S(0.082)PR 90.30799999999999 0.037622 48065000.0 6147.799999999999 5604.4 5123.4 8461.599999999999 7068.5 10335.5 6352.700000000001 6797.9 7422.8 7184.799999999999 7510.5 True False 6771.92013022884 6076.702456643511 5471.104733507001 8984.253814312096 6572.032945001191 10251.331114724106 6594.4554748308265 6662.310551650617 7110.845529482328 6731.150501834359 6586.756112982155 1.0281115641858571 0.9225637555741051 0.8306220299737129 1.3639876230736094 0.9977647315722006 1.5563550462297007 1.0011689155809937 1.0114706598168326 1.0795671507355828 1.0219219273304518 1.0 12.685352417281186 LES(ph)TPNSR ddPTM_A549_MK2206_60min_R1 1 LESTPNSR 8 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 LES(0.727)T(0.271)PNS(0.002)R 59.35 0.012706 3703100.0 766.7 876.82 795.79 519.75 1315.0 538.67 571.36 809.52 1097.4 1129.9 1304.7 True False 896.1002159846867 921.4463927989754 908.6449882045492 647.0887733324643 1121.5652419699659 595.6717018597932 675.1687161963673 924.2719390510257 848.8406521876983 874.6548052503688 980.7069821118452 0.913728802108692 0.9395736031314281 0.926520362124762 0.6598186666714959 1.143629302561707 0.6073900897259642 0.6884510139231041 0.9424547351143634 0.8655395216620289 0.8918615052244202 1.0 9.937678338858607 -10.314011640186763 0.7546692755184907 0.9979534380348959 0.8509183712178385 0.03886750370054781 0.14884566855463713 1.0808994695305778 1.1465817895456114 0.08696141688334057 0.028207421650919103 4.852754933814453e-11 10.314011640186763 -0.14703506681705736 LES(ph)TPNSR ddPTM_A549_PD325901_60min_R1 1 LESTPNSR 8 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 LES(0.531)T(0.435)PNS(0.034)R 45.997 0.044141 4425100.0 742.09 702.55 759.42 906.99 1025.9 719.45 590.92 940.57 992.76 822.94 763.0 True False 817.4264305022159 761.7563540994397 810.9588079634392 963.0127123762566 953.8443231628668 713.5910377328869 613.4077839638311 921.809593487109 951.0377496158957 770.9794279561812 669.155837055507 1.2215785699473913 1.1383840832225325 1.211913224177957 1.4391456504568663 1.4254442244127725 1.066404861493712 0.916688983336102 1.377570877276296 1.4212500242107375 1.1521672311022937 1.0 9.386198423310805 -7.269520176818934 24.832206967241042 1.1866407234307108 1.2832689020360644 0.12523273224303455 0.1621587253988695 1548.4687524553915 4758424.8108200645 0.03077389822937947 0.049705788075027714 5.376254550856912e-08 7.269520176818934 0.09662817860535355 LES(ph)YRPDTDLSR ddPTM_A549_MK2206_60min_R1 2 LESYRPDTDLSR 12 1 Q8ND76;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 LES(1)YRPDTDLSR;LES(1)YRPDTDLSR 128.9 2.3302e-08 35802000.0 1638.58 1983.2400000000002 1470.4 1059.85 2248.24 1658.68 1401.87 1444.51 2569.06 2437.1 1999.33 True False 1915.132244565265 2084.1784448970593 1678.9248302390943 1319.5132975784745 1917.5268742255196 1834.2004166573254 1656.5716329008003 1649.2737161263428 1987.1720119458064 1886.5574173605405 1502.8411822991313 1.2743410728440296 1.386825480593076 1.1171671697674534 0.8780124693946758 1.2759344745211059 1.2204885241774264 1.1022932112936135 1.097437131449373 1.3222767883601103 1.2553272026218887 1.0 10.553476840412825 -11.089908974381316 1.4265973308245963 1.0002629292974092 1.1978062184449385 0.0 0.15139374793847 0.5359489332371965 1.9529395206209297 0.10001855861216169 0.022029709383394238 8.130008986073835e-12 11.089908974381316 0.19754328914752928 LES(ph)YRPDTDLSR ddPTM_A549_PD325901_60min_R1 2 LESYRPDTDLSR 12 1 Q8ND76;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 LES(0.971)YRPDT(0.029)DLSR;LES(0.999)YRPDT(0.001)DLSR 124.25 1.8218e-06 50438000.0 3570.9 4713.9 4420.9 4595.1 5122.9 4508.0 4303.7 5256.2 5255.8 4508.3 5172.700000000001 True False 3933.415139242358 5111.1568964334865 4720.928859031326 4878.92889077072 4763.085177045568 4471.288342622637 4467.479658575004 5151.3609675908665 5034.917003536835 4223.645168608709 4536.490692446946 0.8670612166781954 1.1266763767295576 1.040656573348968 1.075485264169927 1.0499492889902524 0.9856271390718672 0.9847875729169151 1.1355387494054936 1.1098704582199952 0.9310379883818322 1.0 12.147360983423741 LESDYEILER ddPTM_A549_MK2206_60min_R1 1 LESDYEILER 10 0 J3KR24;A0A0A0MSX9;P41252;Q5TCD1 J3KR24 IARS Isoleucine--tRNA ligase, cytoplasmic 0 56.563 0.018206 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LESEGS(ph)PETLTNLR ddPTM_A549_MK2206_60min_R1 1 LESEGSPETLTNLR 14 0 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LES(0.189)EGS(0.806)PET(0.005)LTNLR 261.67 2.2838e-83 19337000.0 3591.0 4165.5 3972.2 4361.1 5840.7 4901.5 4315.4 5686.1 7048.8 6015.1 5708.6 True False 4197.073008479213 4377.50615771097 4535.517689523758 5429.569695777218 4981.540767128505 5420.173476647624 5099.452320557619 6492.12208795093 5452.2580546206045 4656.284732331617 4290.9970706550785 0.978111366512416 1.020160602683116 1.056984569050603 1.2653398747131563 1.1609284940313431 1.2631501227802426 1.1884073180639851 1.512963532962706 1.2706273075568062 1.0851288536584278 1.0 12.067097200860752 -6.068212948080371 4.916906553198731 1.1814999908842774 1.0065992445224423 0.3085794520978635 0.12627104301014172 0.27193634289067525 12.616167323859267 0.021590262806044012 0.060654766964761554 8.546475498765014e-07 6.068212948080371 -0.17490074636183506 LESEGS(ph)PETLTNLR ddPTM_A549_PD325901_60min_R1 1 LESEGSPETLTNLR 14 0 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LES(0.036)EGS(0.964)PETLTNLR 283.21 1.9926999999999996e-99 21412000.0 3916.0 4886.3 4425.5 4318.0 5099.8 5076.3 4416.6 4555.1 4473.0 5422.5 5817.2 True False 4313.549437193166 5298.085649471341 4725.8410426933715 4584.713053110479 4741.607641354896 5034.960295841898 4584.676129856253 4464.24495709318 4285.015365276506 5080.122424590362 5101.721278269063 0.8455086434390019 1.0384898273527208 0.9263228594676928 0.8986600410020837 0.9294133063583693 0.9869140278769176 0.8986528035909803 0.8750468152991359 0.8399156150549931 0.9957663595283612 1.0 12.316768367169106 LESEST(ph)SPSLEMK ddPTM_A549_MK2206_60min_R1 1 LESESTSPSLEMK 13 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LESES(0.004)T(0.489)S(0.489)PS(0.019)LEMK 192.4 7.3964e-26 20238000.0 5770.3 5310.6 5049.8 4644.6 6607.0 5788.2 6041.6 5174.0 7571.2 6854.3 8187.2 True False 6744.185569709715 5580.886856593415 5765.93757327352 5782.52720850402 5635.119052239979 6400.703482103802 7139.280516262903 5907.43034471045 5856.33528872198 5305.908869481906 6154.092284775121 1.0958863237060081 0.9068578432598771 0.9369273820508227 0.9396230899575015 0.9156702225900882 1.040072716806471 1.1600866847455444 0.9599190378287147 0.9516164233042499 0.8621757074732901 1.0 12.587330362683424 -5.234448095066688 23.217157878738014 0.9790447785590282 1.0958867480694015 0.1751966179022405 0.07643858303513724 4458.548107568059 3834960.011220623 0.009452023047909396 0.9731138062511787 5.8284342947275006e-06 5.234448095066688 0.11684196951037329 LESEST(ph)SPSLEMK ddPTM_A549_PD325901_60min_R1 1 LESESTSPSLEMK 13 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LESES(0.002)T(0.641)S(0.355)PS(0.002)LEMK 205.86 1.9184e-31 55483000.0 15312.0 17216.0 15575.0 15333.0 19301.0 16275.0 18101.0 16937.0 16370.0 17718.0 19120.0 True False 16866.462967901367 18666.852739557246 16632.01316008344 16280.084586230441 17945.36434483526 16142.46179595905 18789.84346024726 16599.17824818054 15682.02582820845 16599.282456227207 16768.361211666182 1.0058504080987314 1.1132186684152672 0.9918687312456101 0.970881076613734 1.0701918999902151 0.9626737873900475 1.1205533577827915 0.9899105845019643 0.9352151728040102 0.9899167990655316 1.0 14.033454079344386 -8.510151310284922 24.774155228361217 0.9690469363829266 1.0330361392000411 0.2086215357202924 0.05157097091645866 568.6733518523456 1106933.4056833014 0.008380351148247788 0.009885373928321534 3.089218946268847e-09 8.510151310284922 0.06398920281711451 LESESTS(ph)PSLEMK ddPTM_A549_MK2206_60min_R1 4 LESESTSPSLEMK 13 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LESES(0.002)T(0.142)S(0.855)PS(0.001)LEMK;LES(0.002)ES(0.009)T(0.16)S(0.668)PS(0.162)LEMK;LESES(0.016)T(0.122)S(0.546)PS(0.316)LEMK;LESES(0.001)T(0.149)S(0.842)PS(0.008)LEMK 220.34 1.8978999999999997e-38 42873000.0 16918.199999999997 18255.199999999997 15813.1 16413.1 24380.800000000003 19903.7 19247.1 18863.2 25921.7 25281.6 27600.6 True False 19773.57854972236 19184.31170573647 18055.635359802658 20434.31023681205 20794.41661705046 22009.89632299323 22744.048931502206 21537.11636612722 20050.476338448927 19570.46900116623 20746.609282192232 0.9530992886965356 0.9246962452897421 0.8702933146430168 0.984946983811555 1.0023043444935007 1.0608912532943557 1.0962778843588898 1.038102953267333 0.9664459413933809 0.9433092769508348 1.0 14.340587948708414 -6.428003997315943 5.935175736990569 1.0032178104183045 0.9172855878119487 0.47496925847318183 0.04444078918495963 0.18423200988874816 9.421426655750267 0.00677542655662526 0.01587649459040414 3.732467223573201e-07 6.428003997315943 -0.0859322226063558 LESESTS(ph)PSLEMK ddPTM_A549_PD325901_60min_R1 1 LESESTSPSLEMK 13 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LESES(0.001)T(0.12)S(0.875)PS(0.004)LEMK 195.71 9.0807e-31 48992000.0 16187.0 15737.0 15131.0 15320.0 16744.0 15931.0 15855.0 15726.0 16017.0 18665.0 19069.0 True False 17830.29232376042 17063.2122190063 16157.880650094548 16266.28160575557 15567.959203664128 15801.263217906224 16458.37070118891 15412.332593191653 15343.861190617881 17486.488714611176 16723.633888350545 1.0661733235012252 1.020305295662583 0.9661704362799945 0.9726523382628246 0.9308957196502942 0.9448462770351107 0.9841384241647138 0.9215899305190886 0.9174956407833231 1.045615374705854 1.0 14.02960074509493 -5.518222950992154 1.6328640859580361 0.9562633639200742 1.0804360086568099 0.4223005128464523 0.03621610378922349 0.37384465433659875 1.3521086406530063 0.0046888158372031434 0.06241375845667315 3.03233409451069e-06 5.518222950992154 0.12417264473673573 LESLYS(ph)DEEDESAVGADK ddPTM_A549_MK2206_60min_R1 2 LESLYSDEEDESAVGADK 18 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;I3L4N6;Q9UP95-7 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK 241.32 1.5450999999999996e-74 22876800.0 4646.7 4244.7 4938.9 3908.2000000000003 5917.799999999999 4752.7 4477.2 4742.700000000001 7643.9 6811.700000000001 6317.299999999999 True False 5430.949359092269 4460.737099420417 5639.310285682713 4865.709175445762 5047.299459262255 5255.627559413071 5290.649286184501 5414.992248909602 5912.5688548000235 5272.9322390688885 4748.540061389716 1.1437092851445456 0.9393912743183068 1.1875882298089535 1.024674765831449 1.0629160529363004 1.1067880846465787 1.1141633465836507 1.1403488606822114 1.2451340366431785 1.1104322951685708 1.0 12.21326830969671 -7.403530362676366 3.4525572941657403 1.1205876016791725 1.0682224946801708 0.08401305900253897 0.07924740988831584 0.6584498529484683 14.516722089454255 0.015416173012952167 0.02521588380808638 3.948840909922414e-08 7.403530362676366 -0.052365106999001654 LESLYS(ph)DEEDESAVGADK ddPTM_A549_PD325901_60min_R1 2 LESLYSDEEDESAVGADK 18 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;I3L4N6;Q9UP95-7 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK 343.3 1.2687999999999993e-219 42983000.0 8337.099999999999 7901.2 7489.299999999999 8338.9 9152.4 7248.599999999999 7914.3 7458.6 7164.299999999999 8268.0 8507.3 True False 9183.476254551359 8567.061853263807 7997.568934819447 8853.974913984022 8509.566998065906 7189.56980486567 8215.483017371138 7309.83237184149 6863.209385524359 7745.957068974292 7460.956032217977 1.2308712469146283 1.1482525585554229 1.0719228072494011 1.186707826148646 1.1405464609789693 0.9636258106628154 1.1011300672319948 0.9797447324814805 0.9198833709631283 1.0381989969550312 1.0 12.865144791090055 -7.428257399420286 0.9033524846532331 0.963360166641115 1.1647824944719942 0.5867733018241968 0.0611286268025979 0.2455818439103987 0.39903931372778056 0.010677976980565936 0.023017999572202588 3.730290039174451e-08 7.428257399420286 0.2014223278308792 LESS(ph)EGEIIQTVDR ddPTM_A549_MK2206_60min_R1 2 LESSEGEIIQTVDR 14 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 LES(0.014)S(0.986)EGEIIQTVDR;LES(0.111)S(0.889)EGEIIQTVDR 152.99 5.1375e-14 3650900.0 1834.66 1721.4299999999998 1595.8899999999999 1515.75 2129.2200000000003 1964.6 1880.35 1853.73 3245.8999999999996 2025.81 2515.4 True False 2144.3057548695256 1809.043434177985 1822.2111992180817 1887.1088180446034 1816.0145585606792 2172.492668004064 2221.98525535536 2116.5019043100333 2510.7088326371877 1568.1781140138507 1890.7567584917108 1.1340992146340787 0.9567827411184769 0.9637470240601921 0.9980706452954755 0.9604696904584095 1.1490069562078935 1.1751830294277916 1.1193940705510967 1.3278856845869604 0.8293917802863301 1.0 10.884748060488356 -7.273403447399289 21.10315850030068 1.1568182006256655 0.9976727020152345 0.034003832407812906 0.12992386013307142 93.27440622207821 164525.04620843186 0.018237716944523478 0.029356667766977332 5.328396723802776e-08 7.273403447399289 -0.15914549861043104 LESS(ph)EGEIIQTVDR ddPTM_A549_PD325901_60min_R1 1 LESSEGEIIQTVDR 14 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 LES(0.362)S(0.638)EGEIIQTVDR 53.3 0.020176 3156700.0 1652.7 1965.4 2073.9 2065.5 2032.2 1927.3 1936.7 2024.1 2178.0 1987.4 1890.2 True False 1820.4808873465652 2131.031155571901 2214.6473253738086 2193.0812439091465 1889.4652827094044 1911.6047077942787 2010.402178302905 1983.727737624268 2086.466234199022 1861.9152248281953 1657.7173829650308 1.098185315575573 1.2855213907211918 1.3359619366557165 1.3229524323299016 1.1397994025554972 1.1531547701907663 1.2127532708301907 1.1966622043114055 1.2586380861055588 1.1231801294729333 1.0 10.694982353649598 -10.83918207582313 0.7311753745052659 0.9736289349757768 1.2289492153741701 0.3344374271054883 0.08013338198396597 0.543459062526652 0.4257120781448285 0.08719120534665385 0.01439532564768641 1.4481645903836612e-11 10.83918207582313 0.2553202803983933 LESSDLT(ph)PPHS(ph)PPPSSR ddPTM_A549_MK2206_60min_R1 3 LESSDLTPPHSPPPSSR 17 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 2 LES(0.01)S(0.048)DLT(0.941)PPHS(0.835)PPPS(0.1)S(0.065)R;LES(0.053)S(0.055)DLT(0.899)PPHS(0.96)PPPS(0.016)S(0.018)R;LES(0.067)S(0.358)DLT(0.576)PPHS(0.986)PPPS(0.007)S(0.006)R 81.594 2.2214e-06 22356700.0 3530.9 3348.5 3442.1 3504.6000000000004 4279.0 4014.3 3226.4 3947.4 5026.0 4392.0 5731.9 True False 4126.829597783136 3518.924347400115 3930.241538469796 4363.227157327475 3649.564768357024 4439.090561523321 3812.595116801946 4506.956038405497 3887.6190248727644 3399.844149623526 4308.511037607794 0.9578319660228763 0.8167379209857892 0.9122041243863162 1.0126995426591876 0.847059398595243 1.0303073434826406 0.8848985376903679 1.0460588354226164 0.9023114925176748 0.7890995566559381 1.0 12.072973664464454 LESSDLT(ph)PPHSPPPSSR ddPTM_A549_PD325901_60min_R1 1 LESSDLTPPHSPPPSSR 17 0 Q9H7P9;Q9H7P9-3;H7BXC7 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 LES(0.018)S(0.017)DLT(0.961)PPHS(0.003)PPPSSR 53.872 0.012112999999999999 7212300.0 2070.5 2324.9 1988.8 2151.2 2176.6 2049.6 2284.9 1749.3 2286.4 2066.2 2280.6 True False 2280.695635778462 2520.8274822372596 2123.7719276259363 2284.0747382703266 2023.7231248623589 2032.908737142715 2371.853119845257 1714.4088392006965 2190.3105591701774 1935.7397793801022 2000.1006579145342 1.140290428260995 1.2603503090017865 1.0618325228892989 1.1419798944778543 1.011810639056764 1.016403214057431 1.1858668764792777 0.857161279566938 1.0951001643357146 0.9678211802592276 1.0 10.965856892172035 -6.164146393581999 1.2350514830558774 1.038640058419771 1.1985975189251636 0.32757393638949894 0.08820997769735407 0.47680523457014407 1.2551504144539611 0.012127194590111724 0.06318174380046297 6.852571984990165e-07 6.164146393581999 0.1599574605053926 LEST(ph)PNSR ddPTM_A549_MK2206_60min_R1 1 LESTPNSR 8 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 LES(0.226)T(0.773)PNS(0.001)R 71.61399999999999 0.006404399999999999 4277000.0 862.36 841.84 574.92 499.69 1066.2 798.7 702.26 620.95 910.08 810.19 1110.0 True False 1007.9052853222314 884.6860602106357 656.4523010072497 622.1140724319366 909.3633923865998 883.2179038658483 829.8515517993222 708.9715640796203 703.948333099126 627.1675162986077 834.35636555848 1.208003350759583 1.0603215804777462 0.7867768834817369 0.7456215330909856 1.0898980698468257 1.0585619530506758 0.9946008516922593 0.849722724420119 0.843702238225192 0.7516782302952892 1.0 9.704519900798214 -8.21252547530162 24.77523953494789 0.9183951544208611 0.983558964796909 0.1230066024062536 0.13928694817275128 983.9683973103873 498387.5925071977 0.02281231264146873 0.029450519713746546 6.130198319343164e-09 8.21252547530162 0.0651638103760479 LEST(ph)PNSR ddPTM_A549_PD325901_60min_R1 1 LESTPNSR 8 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 LES(0.179)T(0.821)PNS(0.001)R 67.507 0.008452600000000001 4112500.0 696.58 619.04 725.68 662.96 869.41 925.37 807.47 824.66 934.86 942.79 901.37 True False 767.2962888049075 671.2086733210687 774.9290086683379 703.909533508598 808.3456409016745 917.8340935254453 838.1987127145387 808.2115093667451 895.5710852632221 883.2620785024516 790.5072042552061 0.9706379457070636 0.8490860927111509 0.980293417311047 0.8904530277770232 1.0225658116086054 1.1610698657581533 1.0603302641678847 1.022396133793897 1.1329069241146312 1.1173358999740381 1.0 9.626634800360772 -6.905551726086615 4.970928972027828 1.0676880555870145 0.9223351603707639 0.6345404928102052 0.055929674724711435 0.12260266646825678 5.092453585029794 0.008978779078450929 0.017257029959415568 1.2429345889000958e-07 6.905551726086615 -0.1453528952162506 LESTARPS(ph)ESSEEFLEEEPEQR ddPTM_A549_MK2206_60min_R1 2 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 LES(0.023)T(0.023)ARPS(0.87)ES(0.042)S(0.042)EEFLEEEPEQR;LES(0.091)T(0.091)ARPS(0.783)ES(0.017)S(0.017)EEFLEEEPEQR 91.81299999999999 4.2692e-07 9274300.0 957.7 964.94 799.8499999999999 935.87 1022.17 929.45 798.9 725.45 1079.96 1202.1100000000001 1353.65 True False 1119.3363464830245 1014.0513244080244 913.2807572543117 1165.1581920128015 871.8101470604112 1027.803782081023 944.0497888709007 828.2847590974487 835.3507843417418 930.5525160983464 1017.5013461605736 1.100083405989303 0.9966093197168068 0.8975720383078346 1.1451171012297865 0.8568147357741475 1.0101252307521011 0.9278118328129648 0.814037998301317 0.8209824856682929 0.9145467174168184 1.0 9.990814987849333 -7.108619160167577 1.275698084301912 0.9072665543848236 1.0183727937926654 0.2662630758305625 0.08837684300426944 0.5668487743552602 1.814131832922349 0.01577291213508684 0.03530128026033416 7.787191230695714e-08 7.108619160167577 0.11110623940784181 LESTARPS(ph)ESSEEFLEEEPEQR ddPTM_A549_PD325901_60min_R1 1 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 LES(0.129)T(0.129)ARPS(0.641)ES(0.05)S(0.05)EEFLEEEPEQR 74.748 5.5495e-05 4098200.0 526.42 316.33 232.49 252.03 219.99 214.47 267.36 296.61 289.76 586.79 263.31 True False 579.8617708700785 342.9882392602314 248.2681694759422 267.59732069834064 204.53866132429965 212.72342742730183 277.5345311050059 290.6938808639563 277.5823948675429 549.7399792577921 230.92453925961416 2.5110443988725506 1.485282769687075 1.0751051848882534 1.158808507559682 0.8857380942713476 0.9211815604756931 1.2018407917791318 1.258826289297679 1.2020480619232685 2.380604421775 1.0 7.8512776794179295 -5.261334886537188 2.1040838489607467 1.0915948484067293 2.9098592133984487 0.4204800968317922 0.40476871208222764 0.1363674570009371 0.6559251986276083 0.017919090537804338 0.4684848303584343 5.478543489113257e-06 5.261334886537188 1.8182643649917194 LESTARPSES(ph)S(ph)EEFLEEEPEQR ddPTM_A549_PD325901_60min_R1 1 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 2 LES(0.109)T(0.11)ARPS(0.245)ES(0.76)S(0.776)EEFLEEEPEQR 49.528 0.0034191000000000004 2395500.0 231.63 315.3 97.82 253.3 299.65 265.94 214.53 256.65 193.07 271.6 188.79 True False 255.14490708300636 341.87143754544616 104.45865343944541 268.94576571396146 278.60361773638067 263.774272812126 222.6940565453205 251.53091441197006 184.9559393190106 254.45112964845393 165.57002683841307 1.5410090337909608 2.064814773987403 0.6309031618469877 1.6243626388756778 1.682693559072029 1.5931281636473653 1.345014316888752 1.5191814558165768 1.1170858811270055 1.5368187981076054 1.0 7.371297714994758 -8.823857454195231 3.4838344635249974 1.0487408375923484 1.5001704816275794 0.060010984587046456 0.3569471594348665 0.21743055520979285 5.132175290944608 0.055731522637832584 0.0594654534590668 1.5001771486155968e-09 8.823857454195231 0.451429644035231 LESTARPSES(ph)SEEFLEEEPEQR ddPTM_A549_MK2206_60min_R1 4 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 LES(0.021)T(0.021)ARPS(0.121)ES(0.819)S(0.018)EEFLEEEPEQR;LES(0.003)T(0.003)ARPS(0.093)ES(0.45)S(0.45)EEFLEEEPEQR;LES(0.004)T(0.024)ARPS(0.159)ES(0.794)S(0.019)EEFLEEEPEQR;LES(0.013)T(0.013)ARPS(0.121)ES(0.701)S(0.151)EEFLEEEPEQR 123.14 6.2182e-16 28582300.0 2584.9700000000003 2629.1 2304.5499999999997 2032.83 3113.1400000000003 2499.99 2388.94 2727.1899999999996 3415.93 3375.12 3493.02 True False 3021.24973955124 2762.9099602059564 2631.3698432586407 2530.8734412572076 2655.201229951622 2764.537282440946 2822.97947505977 3113.7775341690945 2642.2273091193033 2612.6780478773576 2625.6067315523264 1.1506863168975041 1.0522939048729711 1.0021949637914385 0.9639194670105412 1.0112714893832553 1.0529136938975168 1.0751722415758553 1.185926855210395 1.0063301854642757 0.9950759253015302 1.0 11.35843512742461 -8.953714977563557 24.999920663750625 1.0027922067569712 1.0572862119760627 0.16885752549949795 0.05997956750368499 183.28512642542276 98998.06849385303 0.01087961836003932 0.011578505519365272 1.1124615834047913e-09 8.953714977563557 0.054494005219091424 LESTARPSES(ph)SEEFLEEEPEQR ddPTM_A549_PD325901_60min_R1 4 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 LES(0.051)T(0.051)ARPS(0.051)ES(0.423)S(0.423)EEFLEEEPEQR;LES(0.005)T(0.005)ARPS(0.1)ES(0.857)S(0.032)EEFLEEEPEQR;LES(0.027)T(0.027)ARPS(0.02)ES(0.463)S(0.463)EEFLEEEPEQR;LESTARPS(0.087)ES(0.896)S(0.017)EEFLEEEPEQR 157.43 3.5966e-33 31885500.0 1965.66 1763.52 1700.71 1638.5 2017.8 1870.1399999999999 2051.73 1747.6799999999998 1811.66 2164.88 1912.4799999999998 True False 2165.212356157589 1912.1380194739781 1816.1304078000323 1739.7064236965095 1876.0766890321 1854.9101998829412 2129.8097078997343 1712.821151371563 1735.522230417355 2028.189107339269 1677.257084209588 1.2909245556580562 1.1400387200481426 1.0827978757090115 1.0372330157820446 1.1185385393177256 1.1059188345936084 1.2698170888354978 1.0212037066331634 1.034738351536148 1.2092297158458918 1.0 10.7118881218578 -2.0000000000079923 0.10154390116212074 0.9280407313261908 1.707133605349155 0.0 0.09882717948071269 83.4616256823206 0.5803302258871085 0.4827500990064073 9.105992232791701 0.00999999999981597 2.0000000000079923 0.7790928740229642 LESTARPSESS(ph)EEFLEEEPEQR ddPTM_A549_MK2206_60min_R1 2 LESTARPSESSEEFLEEEPEQR 22 1 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 LESTARPS(0.004)ES(0.121)S(0.875)EEFLEEEPEQR;LES(0.009)T(0.02)ARPS(0.079)ES(0.382)S(0.51)EEFLEEEPEQR 118.57 1.3382e-15 3883500.0 1841.6100000000001 1898.6799999999998 1510.92 1229.95 2354.18 1799.05 1652.7400000000002 1704.4299999999998 3072.47 2539.12 2762.25 True False 2152.428744958339 1995.3147020820215 1725.1911755337683 1531.2878052145543 2007.8832405633889 1989.4242768872602 1953.0214645869232 1946.038172097959 2376.5604507263874 1965.5310285045725 2076.307090778298 1.0366620402724276 0.9609920955064905 0.8308940345077207 0.7375054547641867 0.9670454093622246 0.9581551234511895 0.9406226435680275 0.9372593200404146 1.1446093216565283 0.9466475538393497 1.0 11.01980412218164 -8.645922486733237 6.692886361749484 1.068081557853126 0.9153497952858352 0.20293127368160035 0.0884440319409848 0.17352791856903713 9.608586683062518 0.015664427443127474 0.017753310087816228 2.2598390723237105e-09 8.645922486733237 -0.15273176256729082 LESTS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LESTSPK 7 0 Q03111 Q03111 MLLT1 Protein ENL 1 LEST(0.069)S(0.93)PK;LES(0.001)T(0.008)S(0.991)PK 104.44 0.010095 217280000.0 18840.2 19598.1 19486.9 18818.0 20836.0 15832.2 17137.0 18003.1 19297.4 21448.0 21433.0 True False 20752.84323457781 21249.70066653793 20809.398218249124 19980.34512122118 19372.551240297773 15703.267812349184 17789.157912726223 17644.014047341258 18486.397386516164 20093.769619661416 18796.87687498123 1.1040580503136659 1.1304910282633933 1.1070667939495082 1.0629608979252907 1.0306260645928245 0.8354189856534273 0.9463890214870595 0.9386673203581792 0.9834823896262088 1.0689951183542814 1.0 14.198205355746445 -6.724678067176329 2.4777301388733046 0.9732949249745128 1.1118726367337692 0.5812319135510973 0.05485409692691499 0.15017107063567062 1.8787063421381403 0.007510137996507236 0.01681974730699128 1.885045914247086e-07 6.724678067176329 0.13857771175925648 LETGAPRPPAT(ph)VTNAVSWR ddPTM_A549_PD325901_60min_R1 2 LETGAPRPPATVTNAVSWR 19 1 K7EJL1;E7ENJ6;Q9BXS5;Q9BXS5-2;A0A087WZX7 K7EJL1 AP1M1 AP-1 complex subunit mu-1 1 LET(0.006)GAPRPPAT(0.993)VTNAVSWR;LETGAPRPPAT(0.996)VT(0.004)NAVSWR 155.05 8.292299999999999e-27 66256000.0 4293.4 3998.2 4365.1 4923.6 4353.4 4064.2 3633.1000000000004 4472.299999999999 5701.6 5113.7 6378.2 True False 4729.262807365968 4335.142345684121 4661.341935478667 5227.719589693094 4047.6322024146834 4031.102502681214 3771.359608608603 4383.096468048519 5461.981579848095 4790.820109290496 5593.721834741064 0.8454590605478128 0.7750014165451966 0.833316720636403 0.9345691015997916 0.7236026963793508 0.7206476513803649 0.6742129337189647 0.7835742637087019 0.9764485509317308 0.8564637732852629 1.0 12.449592797750846 -8.77295403028753 6.205860534359893 0.989383678775879 0.7840936507525562 0.42135847204311616 0.07776330536290023 0.07180551965999708 10.318383745653096 0.012275657460831686 0.013337351480449339 1.6867315550829497e-09 8.77295403028753 -0.20529002802332275 LETGAPRPPATVT(ph)NAVSWR ddPTM_A549_MK2206_60min_R1 2 LETGAPRPPATVTNAVSWR 19 1 K7EJL1;E7ENJ6;Q9BXS5;Q9BXS5-2;A0A087WZX7 K7EJL1 AP1M1 AP-1 complex subunit mu-1 1 LETGAPRPPAT(0.025)VT(0.975)NAVSWR;LETGAPRPPAT(0.18)VT(0.82)NAVSWR 176.1 8.235299999999999e-35 58281000.0 7844.6 6181.1 4539.2 5675.700000000001 8771.1 6598.9 6943.6 5940.6 12282.900000000001 9926.0 8794.3 True False 9168.57669794376 6495.691588387293 5182.926815438863 7066.246754791854 7480.882809005914 7297.191218004691 8205.162240585787 6782.698242324489 9500.842761760789 7683.709706093604 6610.432599667512 1.3869858832544357 0.9826424353398612 0.7840525922160603 1.0689537557870674 1.1316782519471091 1.1038901173232931 1.241244368938651 1.0260596625197633 1.4372497742793198 1.1623610997077674 1.0 12.690528972276006 -7.25187029336415 1.5178317140405135 1.197465217104334 1.0367288895608222 0.061214605944594824 0.17193341925741262 0.7083278993757812 3.188129337379352 0.032603593763517305 0.06393388504308145 5.599248039844431e-08 7.25187029336415 -0.16073632754351186 LETLGSASTS(ph)TPGRR ddPTM_A549_MK2206_60min_R1 1 LETLGSASTSTPGRR 15 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 LETLGSAST(0.008)S(0.574)T(0.417)PGRR 119.62 2.7493000000000004e-07 35222000.0 3542.8 3400.7 3171.9 2418.8 4497.9 3124.6 2831.9 3250.3 4508.8 4600.5 4557.2 True False 4140.738026856069 3573.7811044358905 3621.723115502847 3011.406108584057 3836.264868332102 3455.2430980583813 3346.4195732926587 3711.0399786262815 3487.5639990740797 3561.243854813986 3425.521467678473 1.2087905639844987 1.043280895523885 1.0572764321215429 0.8791088121905515 1.1199068242687138 1.0086765272558782 0.976908072206763 1.08335037851662 1.018111850117131 1.0396209419255207 1.0 11.742107911149267 -5.12865319994268 1.9183283321283053 1.0127567313787291 1.3204553378278399 0.4515324880906677 0.05907349390057088 0.7238389385778992 2.0544809504842045 0.007329135750426931 0.44179135084738824 7.436127028643402e-06 5.12865319994268 0.30769860644911073 LETLGSASTST(ph)PGRR ddPTM_A549_MK2206_60min_R1 1 LETLGSASTSTPGRR 15 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 LETLGSAST(0.005)S(0.266)T(0.729)PGRR 91.65299999999999 1.7919000000000002e-05 29694000.0 2497.0 2213.7 1796.1 1607.7 3246.7 2713.1 2208.2 2573.0 3226.5 2671.7 3265.6 True False 2918.4325542112474 2326.3678745228117 2050.813987753291 2001.5865721723947 2769.1147308774844 3000.1984411899766 2609.4013565962223 2937.730629482025 2495.7029016617557 2068.1611144237636 2454.6613940250195 1.1889348817377052 0.9477347385612974 0.8354773463848219 0.8154226799038471 1.1281045677492982 1.2222453363599837 1.063039229340495 1.1967966892023731 1.0167198244681066 0.8425443604800034 1.0 11.261308311706102 -6.776615255022065 24.99866629021065 1.0502614461576678 0.9389943172360182 0.15203862441071725 0.13232327887414352 346.29065449084715 570431.8211973209 0.01803402410451137 0.034173273275322345 1.6725717028968202e-07 6.776615255022065 -0.11126712892164958 LETLGSASTST(ph)PGRR ddPTM_A549_PD325901_60min_R1 2 LETLGSASTSTPGRR 15 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 LETLGSAST(0.001)S(0.184)T(0.815)PGRR;LETLGSAST(0.002)S(0.199)T(0.799)PGRR 140.8 1.2365e-13 110298000.0 3946.3 4064.1000000000004 4082.4 4257.6 4860.6 4352.7 4312.3 5091.4 4351.8 4796.1 5034.2 True False 4346.925470887484 4406.5959699601935 4359.456213465467 4520.582282288835 4519.208224159691 4317.253054333088 4476.406936281104 4989.84803287397 4168.9089797921515 4493.273427492451 4415.025314423108 0.9845754353178556 0.9980907596530925 0.9874136393338206 1.0239085759080226 1.0235973527481792 0.9778546547013862 1.0139028923928188 1.130196924709133 0.9442548304701814 1.0177231402985891 1.0 12.108205994537636 LETLPLS(ph)PGSGAEPDTKPVFHTLTNGHAK ddPTM_A549_MK2206_60min_R1 3 LETLPLSPGSGAEPDTKPVFHTLTNGHAK 29 1 A0A087WXS2;E0YMJ8;A0A0C4DGS8;A0A087WZC2;P35680-3;P35680-4;P35680-2;P35680 A0A087WXS2 HNF1B Hepatocyte nuclear factor 1-beta 1 LETLPLS(1)PGSGAEPDTKPVFHTLTNGHAK;LETLPLS(0.983)PGS(0.016)GAEPDTKPVFHTLTNGHAK;LET(0.001)LPLS(0.995)PGS(0.004)GAEPDTKPVFHTLTNGHAK 169.39 1.9726e-56 31000800.0 3005.59 3264.8999999999996 3334.3 2968.52 4218.27 2810.68 3080.84 3092.02 5211.5 3999.17 5142.9 True False 3512.860112379571 3431.0694644845844 3807.1538774933447 3695.807533261927 3597.768070908482 3108.104292021613 3640.5887489611036 3530.3233039141123 4031.103571055396 3095.754719455811 3865.775993180813 0.9087076226289931 0.8875499952757101 0.9848356149474575 0.9560325119151475 0.9306716367567355 0.8040052753973007 0.9417485015642558 0.913225005831058 1.0427669834377933 0.8008106845602768 1.0 11.91654232601612 -8.754761128320018 24.83381393356656 1.020195521392245 0.9161723889651291 0.0 0.07958985077819575 83.67786096427905 311164.9915376718 0.007831504230936094 0.008781444916005597 1.7588907772265144e-09 8.754761128320018 -0.1040231324271158 LETLPLS(ph)PGSGAEPDTKPVFHTLTNGHAK ddPTM_A549_PD325901_60min_R1 4 LETLPLSPGSGAEPDTKPVFHTLTNGHAK 29 1 A0A087WXS2;E0YMJ8;A0A0C4DGS8;A0A087WZC2;P35680-3;P35680-4;P35680-2;P35680 A0A087WXS2 HNF1B Hepatocyte nuclear factor 1-beta 1 LETLPLS(0.998)PGS(0.002)GAEPDTKPVFHTLTNGHAK;LETLPLS(0.996)PGS(0.003)GAEPDTKPVFHTLTNGHAK;LETLPLS(1)PGSGAEPDTKPVFHTLTNGHAK;LET(0.002)LPLS(0.996)PGS(0.002)GAEPDTKPVFHTLTNGHAK 175.42 1.0558999999999999e-57 56577800.0 7396.9 6726.5 6330.3 6875.700000000001 8101.499999999999 7742.9 7255.0 9005.0 7398.6 7558.6 8151.0 True False 8147.827842690029 7293.365761653801 6759.912225186277 7300.39637315233 7532.478588657728 7679.844389550316 7531.092995088327 8825.388210714162 7087.66257132456 7081.348706041252 7148.478673446179 1.139798859994651 1.0202682409539559 0.9456434766038717 1.0212517525260958 1.0537177115234266 1.0743326993585298 1.0535238809711236 1.2345827152701805 0.9914924412732004 0.9906091952607639 1.0 12.803420527419405 LETSSESEATLVGSSPSTSPPSALPPDVDPGEPMHAS(ph)PPRK ddPTM_A549_PD325901_60min_R1 1 LETSSESEATLVGSSPSTSPPSALPPDVDPGEPMHASPPRK 41 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 LETSSESEATLVGS(0.015)S(0.015)PS(0.015)T(0.015)S(0.015)PPS(0.015)ALPPDVDPGEPMHAS(0.909)PPRK 56.655 0.00040088 2763700.0 653.68 778.76 691.94 775.06 1064.7 1069.0 545.77 596.26 757.93 720.06 843.36 True False 720.0411123862175 844.3888382584581 738.8992093732352 822.933695911026 989.9191450155993 1060.2944184258197 566.5395760068033 584.367126543079 726.0768378725738 674.5952887137914 739.6320664995185 0.9735125679366232 1.1416336263714546 0.9990091598789764 1.1126257678439389 1.3383940338074076 1.433543063436812 0.7659748700297488 0.790078138862655 0.9816730111620255 0.9120687423768296 1.0 9.530663963431083 -7.775504259343035 24.99925079528077 0.9574625581945184 1.1630826567104562 0.4372931582222369 0.14736698260077893 230.0309333665495 408861.582605907 0.02447003656755518 0.03389869333623714 1.6768558899041787e-08 7.775504259343035 0.20562009851593777 LEVFTT(ph)PK ddPTM_A549_MK2206_60min_R1 2 LEVFTTPK 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LEVFT(0.017)T(0.983)PK;LEVFT(0.088)T(0.912)PK 88.948 0.0028323 6508300.0 1612.98 1508.44 1545.38 1195.1 2238.5 2282.83 1606.06 2281.7 2473.1000000000004 1881.19 2418.7 True False 1885.2115904251732 1585.2131529318297 1764.538121704906 1487.8995536500772 1909.2196153230186 2524.397555380088 1897.8603128226284 2605.1379624131873 1912.9467987291757 1456.2278724568034 1818.0700372759409 1.0369301246776126 0.8719208393682092 0.9705556362112193 0.8183950690257421 1.050135350222068 1.3885040199894911 1.043887349722918 1.4329139741593948 1.0521854271331543 0.8009745733661094 1.0 10.828192062018326 -6.953614945673738 11.109707777413483 1.0890000271629052 0.9251101540248684 0.2060781673927159 0.17347692980024956 0.8039225583959432 189.22918544431158 0.02307836675843085 0.04362330932548185 1.1127178483494714e-07 6.953614945673738 -0.16388987313803682 LEVFTT(ph)PK ddPTM_A549_PD325901_60min_R1 2 LEVFTTPK 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LEVFT(0.012)T(0.988)PK;LEVFT(0.004)T(0.996)PK 107.47 0.0019351 7585900.0 2890.6 2924.4 2767.7 2517.7 3050.3 2562.25 2591.3 3102.8 2754.7 3030.8 3032.5 True False 3184.0515840527505 3170.849451182691 2955.532765532132 2673.212610888434 2836.05745096373 2541.38388551128 2689.9133395137696 3040.9122199004887 2638.929538727293 2839.434770760435 2659.521724601344 1.197227138473566 1.192263038068619 1.111302358688256 1.0051478753342924 1.06637874950574 0.9555792915706404 1.0114274738315896 1.143405670189182 0.9922571845593262 1.0676486469333353 1.0 11.376951106484148 -6.014023118040602 1.9586153327429854 1.0095213923532556 1.2027333862153295 0.5964598049020098 0.05062182818611221 0.14393603810544503 1.0501360335121173 0.006859645889718756 0.02918465159570129 9.68226314986939e-07 6.014023118040602 0.193211993862074 LEVFTT(ph)PKK ddPTM_A549_MK2206_60min_R1 2 LEVFTTPKK 9 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LEVFT(0.104)T(0.896)PKK;LEVFT(0.026)T(0.974)PKK 76.143 0.0012450999999999999 23777000.0 4549.700000000001 4504.3 4899.7 4788.8 6665.6 5254.3 5954.4 5697.200000000001 7114.400000000001 5664.5 6442.2 True False 5317.578130514583 4733.549630579169 5594.551136236731 5962.056214977398 5685.099069866928 5810.3065384779375 7036.237404997983 6504.795546943252 5502.999759362279 4384.885515833891 4842.423944325079 1.098123210948175 0.9775165671164538 1.155320393373051 1.231213186520861 1.1740192794415274 1.1998756418853282 1.4530403545612465 1.3432932807476172 1.1364142880986992 0.9055145865476348 1.0 12.24151367453208 -9.711473693559862 1.2614554594464618 1.0281258048771875 1.1995475007403262 0.3376009971753382 0.12360874255240795 0.4201478536645593 1.3592963425261764 0.03570405063368612 0.02484152784968867 1.9432393957476949e-10 9.711473693559862 0.1714216958631387 LEVFTT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 LEVFTTPKK 9 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LEVFT(0.084)T(0.916)PKK 67.726 0.0029546 17563000.0 4304.9 4100.7 4608.1 4685.2 5131.0 3878.7 4838.8 5020.1 4514.1 4899.5 5102.2 True False 4741.9302789001185 4446.280380407903 4920.8333767563745 4974.594163138776 4770.616260989053 3847.113153178884 5022.9431818929625 4919.970167307739 4324.388075205602 4590.144733846097 4474.661745510624 1.0597293267267949 0.9936573160795459 1.0997106947119275 1.1117251864076045 1.0661400866278568 0.8597550769147294 1.1225302531375523 1.0995177841641075 0.9664167530750698 1.025808205156811 1.0 12.127562913068342 -8.780018478193856 24.994323537134974 0.9841412399453855 1.0497271994585606 0.09455027185578446 0.07136713990118607 333.60587562696435 448795.8337481864 0.012180413676406513 0.012977826128509626 1.6595162974770436e-09 8.780018478193856 0.06558595951317514 LEVPAERS(ph)PR ddPTM_A549_MK2206_60min_R1 4 LEVPAERSPR 10 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LEVPAERS(1)PR;LEVPAERS(1)PR;LEVPAERS(1)PR;LEVPAERS(1)PR 104.59 1.0877000000000001e-05 180064700.0 5494.03 5896.179999999999 6317.99 5138.639999999999 7060.799999999999 5718.38 5892.48 5798.43 7932.879999999999 6903.56 8967.35 True False 6421.287947862719 6196.270377379012 7213.975984903627 6397.607030682315 6022.1656733852 6323.495176046569 6963.0673425034465 6620.375209447128 6136.09534620626 5344.041001269353 6740.509508730482 0.9526413306806706 0.9192584580369544 1.0702419417345084 0.949128107066086 0.8934288521639403 0.9381331141000863 1.0330179541301294 0.9821772672929617 0.9103310867314452 0.7928244881707552 1.0 12.7186419321429 LEVPAERS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LEVPAERSPR 10 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LEVPAERS(1)PR;LEVPAERS(1)PR 141.46 1.42e-08 249180000.0 7537.700000000001 6666.8 7766.0 8027.200000000001 8301.8 7623.700000000001 7109.8 8181.299999999999 6847.9 8121.700000000001 9239.0 True False 8302.92175503854 7228.634633136636 8293.047460751719 8523.021912906082 7718.71020765521 7561.61511482968 7380.367329631844 8018.117553394314 6560.106577213717 7608.894475942008 8102.661570846431 1.0247153583351736 0.892130884393029 1.0234967100921877 1.051879291561691 0.9526141675998555 0.9332260824068663 0.9108571628101292 0.9895658955131105 0.8096236674646683 0.9390611232386888 1.0 12.98418016850324 -7.130749362765578 3.0456478401518554 0.9158802414696292 0.992790753525111 0.18671544757757885 0.060729089497569375 0.3717940266310116 6.589240247169619 0.011731174454932198 0.021450387989111686 7.400322344815069e-08 7.130749362765578 0.07691051205548183 LEVS(ph)PEAQPTAR ddPTM_A549_MK2206_60min_R1 2 LEVSPEAQPTAR 12 0 Q6WKZ4 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 LEVS(1)PEAQPTAR;LEVS(1)PEAQPTAR 150.56 5.2885e-28 20467000.0 5930.2 6473.0 5682.3 6798.6 6561.2 6225.0 5067.0 5897.7 8954.2 7935.0 8068.6 True False 6931.072780530052 6802.448051581586 6488.135584104743 8464.257305200754 5596.056171569082 6883.725368179423 5987.608311689639 6733.717035948747 6926.0879969191665 6142.477988903158 6064.943937968605 1.1428090434833515 1.121601142756812 1.0697766789708996 1.3956035524436812 0.9226888539786615 1.135002308114502 0.9872487483693265 1.1102686364161416 1.1419871424630175 1.01278396828191 1.0 12.566278594346127 -14.99999999996307 0.2569644244729037 0.23803359218939726 1.1281273070742597 0.12890831745562403 0.11083188645001384 66.34565904058192 0.8594469222525887 25.884347351016135 0.051001465977341086 1.0000000000850355e-15 14.99999999996307 0.8900937148848624 LEVS(ph)PEAQPTAR ddPTM_A549_PD325901_60min_R1 2 LEVSPEAQPTAR 12 0 Q6WKZ4 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 LEVS(1)PEAQPTAR;LEVS(1)PEAQPTAR 199.96 1.3280000000000001e-24 54866000.0 17428.6 20838.0 16212.099999999999 19238.7 21654.0 17440.0 16420.7 18030.8 19757.4 20566.0 22842.0 True False 19197.938641742807 22594.09139096737 17312.350597276978 20427.030804742157 20133.097742244587 17297.97442221357 17045.59872425183 17671.161549111035 18927.06518620925 19267.459250184485 20032.578807368136 0.9583358601181021 1.127867340906558 0.8642097836604723 1.0196905251773645 1.0050177730906755 0.8634921438996782 0.8508938808208921 0.8821211546968405 0.9448142132977772 0.9618062375023712 1.0 14.290060531759693 -4.862862291194014 18.78357069727239 0.9608811871040517 8.016677527944611e-05 0.0 0.08102220410959304 11631.940936261524 3323351.9026824944 0.010834089850203787 523522.002410918 1.371316522838871e-05 4.862862291194014 -0.9608010203287722 LEVTEIVKPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LEVTEIVKPSPK 12 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LEVTEIVKPS(1)PK;LEVT(0.001)EIVKPS(0.999)PK 96.993 7.1096e-05 164796000.0 6036.3 7349.5 7272.200000000001 6209.3 9512.3 7307.299999999999 7382.0 7039.3 9975.099999999999 9257.3 9770.1 True False 7055.079866634104 7723.558157747399 8303.507311251864 7730.5787787460695 8113.053270867611 8080.553635806832 8723.213845844275 8037.142331952119 7715.755776961463 7166.069500525929 7343.914528957568 0.9606702037197508 1.05169499553581 1.1306650259218778 1.0526509735732703 1.1047314397352086 1.1003060566601972 1.1878152736456877 1.0943948626119089 1.0506325674866857 0.975783347187609 1.0 12.842333552922712 -9.381543500388759 1.3261877385452856 1.0133267161049013 1.0877934295356304 0.2864663432311766 0.05503118884306977 0.38683893763757987 1.4081495829208468 0.013168601115627995 0.010828337371957493 4.1539044226116655e-10 9.381543500388759 0.07446671343072908 LEVTEIVKPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LEVTEIVKPSPK 12 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LEVTEIVKPS(1)PK;LEVT(0.001)EIVKPS(0.999)PK 106.19 4.1995e-05 295960000.0 12708.8 13188.900000000001 12753.8 14528.8 15189.5 14246.9 13871.599999999999 14569.9 15343.8 14767.599999999999 14716.2 True False 13998.988020275923 14300.374889448569 13619.349562829686 15426.210978701149 14122.641920930264 14130.877969944646 14399.491328830774 14279.29191463457 14698.953445501811 13835.171215745617 12906.200693677913 1.0846714964794644 1.1080235949262427 1.0552562978120361 1.1952557801350214 1.0942524648518928 1.0948906115233927 1.1157033483823282 1.1063900410001577 1.1389063128936214 1.0719786205186441 1.0 13.65577674447884 -10.831042461721175 0.9873541590844322 0.9975028021648477 1.1120203383983398 0.29353975000752275 0.039187548629759233 0.3013769754330014 0.5026941396016399 0.02505071262807685 0.0056508714485009985 1.475562257953909e-11 10.831042461721175 0.11451753623349215 LEVTEIVKPS(ph)PKR ddPTM_A549_MK2206_60min_R1 2 LEVTEIVKPSPKR 13 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LEVTEIVKPS(1)PKR;LEVTEIVKPS(1)PKR 86.49700000000001 4.486e-05 15415300.0 2236.8 2406.6 2508.5 2574.4 4012.6 3022.5 2621.7 2539.8 3623.2 3993.8 3858.7 True False 2614.317155490476 2529.0856605802937 2864.2430200318067 3205.128115569208 3422.351855459078 3342.338943826877 3098.0289541655266 2899.82442781129 2802.550985061482 3091.5978061854353 2900.4782952977516 0.9013400168271559 0.8719546926727365 0.9875071379349091 1.105034338910708 1.1799267248465146 1.1523406154238316 1.0681096835608264 0.999774565633702 0.9662375304117845 1.0658924120196058 1.0 11.502075108128825 -5.865488670538791 4.579023721017225 1.0239905385956247 0.8871310009198058 0.4077374037946635 0.07149667726860331 0.2038231594179266 7.227422613397079 0.012082373894399865 0.040650598862423316 1.363048563658008e-06 5.865488670538791 -0.13685953767581893 LEVTEIVKPS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 LEVTEIVKPSPKR 13 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LEVTEIVKPS(1)PKR;LEVTEIVKPS(1)PKR 92.211 3.6853e-05 22164000.0 3125.6 3745.3 4008.2000000000003 3734.9 3800.8 4565.799999999999 3770.7 3721.4 5038.9 3745.2 3406.2 True False 3442.908611054894 4060.929575131495 4280.220555264622 3965.5962904266644 3533.844920048173 4528.6176385861645 3914.1960519062145 3647.173757618176 4827.132556246762 3508.727432840168 2987.2589936808236 1.1525310052921227 1.3594166370314353 1.4328253975697782 1.327503339621838 1.1829723929272904 1.5159775728070095 1.3102968507873645 1.220909792332476 1.6159069456173578 1.1745641875252353 1.0 11.544606608584946 -11.087069054889797 1.4257819665154559 1.0007587920238739 1.3789441730080239 0.2877367132677904 0.14302207331998826 0.2954640711701776 1.0764535845101288 0.10535846832259356 0.023304956869606954 8.183346586835857e-12 11.087069054889797 0.37818538098415 LFDDEAS(ph)VDEPR ddPTM_A549_MK2206_60min_R1 2 LFDDEASVDEPR 12 0 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46;Q8NI35-5 A0A2R8Y549 INADL InaD-like protein 1 LFDDEAS(1)VDEPR;LFDDEAS(1)VDEPR 208.95 2.1162999999999997e-31 26641000.0 4744.5 5145.5 4931.5 4235.7 5604.4 5442.3 4938.6 4897.1 7338.5 7564.0 7683.7 True False 5545.255608111842 5407.383971792533 5630.860854409753 5273.446690147795 4780.000184103788 6018.200573693634 5835.8796937261595 5591.278921739769 5676.341467176443 5855.28714657385 5775.625230668188 0.9601134745839985 0.93624218259171 0.9749352891718552 0.9130520903860143 0.8276160576905689 1.0419998412877254 1.01043254377691 0.9680820168265849 0.9828098674123531 1.0137927778766984 1.0 12.495761416188092 -7.293803247151688 24.99959003645866 0.9943882343658331 0.9255614305741393 0.49887125200811333 0.03960473060556875 477.6805680878168 368984.95880565606 0.005844126026798629 0.009342894004464721 5.083897113601842e-08 7.293803247151688 -0.06882680379169381 LFDDEAS(ph)VDEPR ddPTM_A549_PD325901_60min_R1 2 LFDDEASVDEPR 12 0 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46;Q8NI35-5 A0A2R8Y549 INADL InaD-like protein 1 LFDDEAS(1)VDEPR;LFDDEAS(1)VDEPR 156.02 9.1116e-14 55790000.0 6045.700000000001 5332.1 5656.5 5559.1 5810.9 5828.700000000001 5209.5 5317.3 5585.4 6162.8 8142.799999999999 True False 6659.455013390894 5781.454780006578 6040.384105297721 5902.472981367878 5402.762430516715 5781.232999699328 5407.750373247785 5211.242280158845 5350.66506175171 5773.679756249969 7141.2872214621 0.932528661412311 0.8095816063287942 0.8458396809953569 0.8265278791236479 0.7565530223010073 0.8095505502599969 0.7572514877983871 0.7297343067923684 0.7492577872615268 0.8084928637092224 1.0 12.80196842903425 -10.801285938501602 1.0489640772244295 0.9999602850140186 0.7971898347283572 0.031067356384997802 0.07695747970570314 0.26411952288630136 0.5161079131182914 0.03925511856286552 0.009815648476064842 1.5802072917991858e-11 10.801285938501602 -0.20277045028566132 LFDDEAS(ph)VDEPRR ddPTM_A549_MK2206_60min_R1 2 LFDDEASVDEPRR 13 1 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46;Q8NI35-5 A0A2R8Y549 INADL InaD-like protein 1 LFDDEAS(1)VDEPRR;LFDDEAS(1)VDEPRR 82.65100000000001 0.00021518 12855300.0 801.01 996.88 783.47 666.14 955.01 760.5699999999999 986.93 806.59 870.01 1055.6 1355.85 True False 936.2009051857234 1047.6169339812536 894.5778269500981 829.3443299041608 814.5292940940969 841.053012574494 1166.2424059711577 920.9266025782772 672.9541241204845 817.13922685396 1019.1550254436615 0.9186050029809485 1.0279269667783877 0.8777642307760469 0.8137567977385267 0.7992202106244962 0.8252454156406327 1.144322872237681 0.9036177809920298 0.6603059469068822 0.8017810896808762 1.0 9.993157803710158 -8.55410634337718 24.997804347278958 0.836555930504205 0.9147279656279278 0.10401808142570457 0.11963612984718741 499.7510414438972 400050.2785061604 0.025871799982539086 0.029335969873830206 2.7918601296089664e-09 8.55410634337718 0.07817203512372284 LFDDEAS(ph)VDEPRR ddPTM_A549_PD325901_60min_R1 2 LFDDEASVDEPRR 13 1 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46;Q8NI35-5 A0A2R8Y549 INADL InaD-like protein 1 LFDDEAS(1)VDEPRR;LFDDEAS(1)VDEPRR 125.36 1.1803e-06 14846400.0 2006.8700000000001 1989.4099999999999 1966.04 2122.1000000000004 2475.1 2211.1 2076.6 2568.0 2229.9700000000003 2757.0 2648.2 True False 2210.6059650203906 2157.064562535001 2099.467297158939 2253.177297361223 2301.2575146314553 2193.0935346878687 2155.626149359123 2516.7792254429714 2136.252115829567 2582.9225494874377 2322.4881883229264 0.9518265695106393 0.9287731035104304 0.9039732936919557 0.9701566228365824 0.9908586515969315 0.9442861951739381 0.9281537620717482 1.0836564156049995 0.9198118322281584 1.1121359249420215 1.0 11.181455544050953 -6.285510249090639 23.12992442162182 0.9688375569504355 0.9282492025681194 0.09746116685827932 0.06103836981099605 447.27058985791535 429785.7932607327 0.006439406841523943 0.014973595763840558 5.181908628677567e-07 6.285510249090639 -0.040588354382316116 LFDDS(ph)DER ddPTM_A549_MK2206_60min_R1 2 LFDDSDER 8 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFDDS(1)DER;LFDDS(1)DER 107.21 0.0018463000000000002 5703400.0 1732.25 1719.63 1028.44 1523.91 2463.8 2355.4 1703.43 2062.05 2328.1800000000003 1744.3400000000001 2294.7 True False 2024.6114505536366 1807.1518218664053 1174.2882565363818 1897.26801841092 2101.3782837761237 2604.646864612018 2012.9211814449357 2354.351902263275 1800.8509473394906 1350.2923825032565 1724.8626595018404 1.1737812511625516 1.0477076606135882 0.6808010191811615 1.0999530936328994 1.2182873066444753 1.5100604388782286 1.167003743953904 1.3649503566523018 1.044054688887286 0.7828405207016517 1.0 10.75226577794781 -4.446763659311152 3.661452808681535 1.080231325743711 11.244505856149477 0.008593029395108642 0.22354196324129735 2314.3066945335936 261.0361227253536 0.02975108744137174 193136.6294683556 3.5746731699460895e-05 4.446763659311152 10.164274530405766 LFDEEEDS(ph)SEKLFDDSDER ddPTM_A549_MK2206_60min_R1 3 LFDEEEDSSEKLFDDSDER 19 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFDEEEDS(0.497)S(0.497)EKLFDDS(0.005)DER;LFDEEEDS(0.5)S(0.5)EKLFDDSDER;LFDEEEDS(0.883)S(0.117)EKLFDDSDER 135.1 2.542e-17 15065400.0 2257.8599999999997 2346.9700000000003 2040.44 1670.03 3041.42 3133.1899999999996 2554.63 2696.3500000000004 3415.2200000000003 2725.0699999999997 3301.23 True False 2638.9315686229106 2466.42074828062 2329.8050738663346 2079.1874249704965 2594.03114694471 3464.7420861568003 3018.7732033336706 3078.5658697255585 2641.678122985667 2109.474794356688 2481.4434816870453 1.0634663203486685 0.9939459699496311 0.9388910491253192 0.8378943305841207 1.0453718434808439 1.396260729581979 1.2165391739171565 1.2406350950345042 1.0645731577128985 0.8500998753042447 1.0 11.276963880293135 -6.9890489510503295 24.801480753904503 1.0924285734710677 0.9574184859316986 0.2147718486452992 0.1429985526003396 292.9923381908259 663551.3557378912 0.020921593598047898 0.039511611519198866 1.0255363274773945e-07 6.9890489510503295 -0.13501008753936905 LFDEEEDS(ph)SEKLFDDSDER ddPTM_A549_PD325901_60min_R1 3 LFDEEEDSSEKLFDDSDER 19 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFDEEEDS(0.886)S(0.114)EKLFDDSDER;LFDEEEDS(0.563)S(0.437)EKLFDDSDER;LFDEEEDS(0.977)S(0.023)EKLFDDSDER 144.77 3.2199000000000003e-21 34251000.0 6381.4 6279.9 7607.4 6175.2 7317.200000000001 6191.1 6547.1 6746.6 6362.1 7497.9 7985.5 True False 7029.235030261612 6809.129212310965 8123.683911012447 6556.628079103249 6803.265114969612 6140.681734252663 6796.253473210586 6612.033770394687 6094.723061798716 7024.481314400384 7003.334124255246 1.0036983678840428 0.9722696492129835 1.1599737734741227 0.9362152315987777 0.9714323198442414 0.8768226141010629 0.9704311336042843 0.9441265621605379 0.8702602151581402 1.003019588922924 1.0 12.773826203770103 -6.406636080577953 20.078044797235567 0.9379228887772973 1.0397075289040179 0.3459895521235984 0.05949333055033658 4.075245016322217 692.6503188343033 0.0087833692050581 0.020410733943329568 3.920702769163013e-07 6.406636080577953 0.1017846401267205 LFDEEEDSS(ph)EKLFDDSDER ddPTM_A549_MK2206_60min_R1 1 LFDEEEDSSEKLFDDSDER 19 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFDEEEDS(0.418)S(0.581)EKLFDDS(0.001)DER 90.83200000000001 1.3805000000000002e-06 2097800.0 876.64 819.94 711.23 803.25 975.7 1252.8 845.85 1024.5 1289.7 1174.5 1112.6 True False 1024.5954002097508 861.6714437530989 812.0931086853587 1000.0462860592633 832.1758225019742 1385.3704644586635 999.5299961402574 1169.726012399663 997.5850092276967 909.179634274324 836.3107138021303 1.2251372406215142 1.0303245307424924 0.9710423354417275 1.1957831814837572 0.9950557953737581 1.6565260274621327 1.1951658392561793 1.3986739534660777 1.1928401642642636 1.0871313965845406 1.0 9.707895234926996 -4.452305215821023 16.581093469804724 1.145835605520136 1.1389360392610537 0.0 0.1975998256869764 0.0 0.0 0.026356426159581073 0.0 3.529350450162781e-05 4.452305215821023 -0.006899566259082279 LFDEEEDSS(ph)EKLFDDSDER ddPTM_A549_PD325901_60min_R1 1 LFDEEEDSSEKLFDDSDER 19 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFDEEEDS(0.046)S(0.954)EKLFDDSDER 199.87 3.786e-55 9726000.0 3791.3 3122.0 3476.2 3501.7 3731.2 3598.4 3605.2 3840.4 3696.5 3993.6 4415.0 True False 4176.189984992457 3385.101896659952 3712.1158360887366 3717.9920560622895 3469.1333839412086 3569.095823445718 3742.397858841135 3763.800209264483 3541.148959925017 3741.4434144479583 3871.9829889909106 1.0785662015733253 0.8742553637980094 0.9587118142417672 0.9602294397040331 0.8959578060660102 0.9217746652280285 0.9665326189401604 0.9720601097592576 0.91455695182377 0.9662861187887158 1.0 11.918856899012104 -11.014190102340745 1.2824444431171447 1.0001753048840492 0.9429419481369954 0.03702835650063474 0.05178259865986223 0.6740027589772601 1.9639804297447565 0.033674235328879726 0.007527329593513429 9.678541078280725e-12 11.014190102340745 -0.057233356747053765 LFDSDPITVTVPVEVSR ddPTM_A549_MK2206_60min_R1 1 LFDSDPITVTVPVEVSR 17 0 P10909-4;P10909-6;P10909;P10909-5;P10909-2;H0YAS8;P10909-3 P10909-4 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain 0 112.51 8.8595e-09 549640.0 751.39 758.93 731.23 620.12 860.02 784.72 955.35 824.63 743.02 743.81 548.74 False True 878.2062622782493 797.5562953478785 834.9294094231053 772.0494278382441 733.5121972616048 867.7585495450219 1128.9247287492994 941.5238278234594 574.7271563591252 575.7828044015197 412.4727135464507 2.129125717741205 1.9335977124170702 2.024205194676665 1.8717587915092464 1.7783290219487458 2.1037962537788553 2.7369682688650516 2.2826330006855824 1.3933701248201529 1.395929440885737 1.0 8.688154873173692 -8.910567332458461 3.586230587005833 1.163161441242932 2.099901555093133 0.6807841886981404 0.2576859968244192 0.09541776026591045 2.2819946835728135 0.05216595204626905 0.05446586352877078 1.2286626815275897e-09 8.910567332458461 0.9367401138502007 LFDTPHT(ph)PK ddPTM_A549_MK2206_60min_R1 2 LFDTPHTPK 9 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 LFDTPHT(1)PK;LFDTPHT(1)PK 116.77 0.00016694 36744000.0 2668.7 3112.8 2800.7 2324.7 4051.1 2478.27 2661.6 2764.2 3972.0 3822.2 4128.2 True False 3119.111316549281 3271.2282241562143 3197.8813738102785 2894.2516043597484 3455.1885564597196 2740.518886457515 3145.178267691562 3156.0338150074654 3072.3483419806253 2958.762365366814 3103.0540074761393 1.005174679214237 1.0541963550343938 1.0305593670318574 0.9327106770899486 1.113479993624084 0.8831682851329128 1.013575097344079 1.0170734403602653 0.9901046951095485 0.9535001189919073 1.0 11.599473091306335 -6.047712441699095 24.999630048545395 0.9946978233168172 1.0328588326396104 0.09206859267740819 0.05577196333806671 648.827554361797 339962.05112050526 0.006582514839906035 0.01741621957286157 8.959578074579212e-07 6.047712441699095 0.038161009322793205 LFDTPHT(ph)PK ddPTM_A549_PD325901_60min_R1 2 LFDTPHTPK 9 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 LFDTPHT(1)PK;LFDTPHT(1)PK 114.86 0.00018909 70385000.0 3811.1000000000004 2978.0 4034.2 3172.6 4305.9 3926.7 3606.5 3843.3999999999996 3887.5 3781.5 4211.2 True False 4198.000066416465 3228.96651129191 4307.985071615325 3368.564296502621 4003.468438548577 3894.7222570932345 3743.7473310525243 3766.7403719110284 3724.121894145407 3542.735444645172 3693.2490969962673 1.136668542024613 0.8742888514934019 1.1664485547749879 0.9120869478428321 1.0839963223180944 1.0545517388092847 1.0136731189069612 1.0198988134795814 1.0083592512550126 0.9592462765445448 1.0 11.850674855324154 -8.525948835207103 1.4448697580891625 1.0033047561243111 1.0318486962634 0.048635129833178636 0.08186210301947887 1.332895623605515 5.403118388794478 0.01342854128101929 0.015744566307044343 2.978867352961242e-09 8.525948835207103 0.028543940139088786 LFEDDDS(ph)NEKLFDEEEDS(ph)SEKLFDDSDER ddPTM_A549_PD325901_60min_R1 2 LFEDDDSNEKLFDEEEDSSEKLFDDSDER 29 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 LFEDDDS(0.899)NEKLFDEEEDS(0.553)S(0.531)EKLFDDS(0.017)DER;LFEDDDS(0.981)NEKLFDEEEDS(0.521)S(0.495)EKLFDDS(0.003)DER 51.398 0.0026195 9510800.0 1848.77 1661.1599999999999 1857.2 1370.42 1522.8700000000001 1820.54 1837.46 1795.29 1727.9700000000003 1626.3000000000002 1886.0300000000002 True False 2036.4557694074597 1801.1517830415264 1983.2407602508495 1455.0677309503628 1415.9088648162924 1805.714125838113 1907.3855457966918 1759.4815325722402 1655.349430077541 1523.615140453906 1654.060266529223 1.2311859553223121 1.0889275436262977 1.199013603302592 0.8796945071436764 0.8560201181709947 1.0916858124082207 1.1531535968753004 1.0637348397614474 1.0007793933355422 0.9211364127928452 1.0 10.691796085458371 -6.238442844419245 24.745187732543837 1.0055623186834828 1.1646309053254207 0.4307424571115568 0.09010820255393169 560.0034081807177 602584.7808024146 0.012345185606389418 0.032637320432172004 5.775068708444299e-07 6.238442844419245 0.1590685866419379 LFEDDDS(ph)NEKLFDEEEDSSEK ddPTM_A549_MK2206_60min_R1 2 LFEDDDSNEKLFDEEEDSSEK 21 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEDDDS(1)NEKLFDEEEDSSEK;LFEDDDS(0.989)NEKLFDEEEDS(0.006)S(0.006)EK 119.33 2.7559e-15 4039200.0 2244.93 2427.1 1991.6100000000001 2022.1 2723.4 2369.21 2409.5 2149.8 3354.2 2924.7 3104.9 True False 2623.819300731059 2550.6290230177146 2274.050245615127 2517.5145907755177 2322.791467666166 2619.9182296456843 2847.2749609268176 2454.5407334863803 2594.4790555567492 2264.008238707634 2333.8676391193894 1.1242365491305555 1.0928764683416723 0.9743698432157736 1.0786878178427555 0.9952541561194094 1.1225650442774153 1.2199813362171412 1.0517052005624976 1.1116650370694086 0.9700671112445286 1.0 11.188507028311964 -3.3468242574491947 1.713223867805833 1.0634388954739318 46.88259457296182 0.06091690517050996 0.07181588942784287 2400.3711599174117 13.038966781359754 0.01017025084743854 431027.69749154313 0.0004499619006198757 3.3468242574491947 45.81915567748789 LFEDDDS(ph)NEKLFDEEEDSSEK ddPTM_A549_PD325901_60min_R1 2 LFEDDDSNEKLFDEEEDSSEK 21 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEDDDS(1)NEKLFDEEEDSSEK;LFEDDDS(0.999)NEKLFDEEEDSSEK 153.87 5.0301e-24 37121000.0 3383.5 4184.5 3286.8 3547.8 3480.8999999999996 3180.6 3107.9 3924.8 2804.1 3726.9 3956.1000000000004 True False 3726.9904291989487 4537.142500504029 3509.862013134015 3766.9395483615963 3236.4135924530883 3154.6982481245686 3226.172835208134 3846.516785053963 2686.2534285204224 3491.5828979632656 3469.5247797841307 1.0742077563229964 1.3077129545062145 1.011626155139435 1.0857220476736213 0.932811781979679 0.9092594658801803 0.9298601508788943 1.1086581100289152 0.774242468067214 1.0063576770823661 1.0 11.760522355304317 -6.4163697200911995 1.1098138292172073 0.9107626184282174 1.1846825423693081 0.3440382920118017 0.10542054350413332 0.3850216938601105 0.8548343514743767 0.017546788142656564 0.07511858419595083 3.8338072992401986e-07 6.4163697200911995 0.27391992394109077 LFEDDDS(ph)NEKLFDEEEDSSEKLFDDSDER ddPTM_A549_PD325901_60min_R1 2 LFEDDDSNEKLFDEEEDSSEKLFDDSDER 29 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEDDDS(0.991)NEKLFDEEEDS(0.004)S(0.004)EKLFDDSDER;LFEDDDS(0.668)NEKLFDEEEDS(0.165)S(0.165)EKLFDDS(0.001)DER 70.679 4.5235e-05 10472500.0 1905.31 2380.7 2420.9 2456.7 2285.8 2359.1 1998.17 2282.1 2469.0 2114.68 2249.1400000000003 True False 2098.735668584912 2581.3299440673763 2585.19683205432 2608.4447794294847 2125.2532935819086 2339.8882717571128 2074.2114527905787 2236.581725227183 2365.236516178782 1981.1587439064533 1972.5100384731622 1.0639923892146355 1.3086523737367015 1.3106127632462714 1.3223987348873383 1.0774359836601788 1.1862491070353804 1.0515593899821871 1.1338759659537285 1.1990998626347236 1.004384619223528 1.0 10.945816927064875 -14.99999999998297 0.15928010102148354 0.28029032755397726 1.248769882157095 0.3964780895740657 0.09093721121712948 45.652843383815096 0.46969519875401267 10.345623523776286 0.15095302213603173 1.0000000000392128e-15 14.99999999998297 0.9684795546031177 LFEDDDSNEKLFDEEEDS(ph)SEKLFDDSDER ddPTM_A549_PD325901_60min_R1 2 LFEDDDSNEKLFDEEEDSSEKLFDDSDER 29 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEDDDS(0.015)NEKLFDEEEDS(0.803)S(0.179)EKLFDDS(0.003)DER;LFEDDDS(0.003)NEKLFDEEEDS(0.877)S(0.117)EKLFDDS(0.003)DER 71.149 3.771e-05 11222100.0 2108.41 2180.9 1820.76 2015.86 2069.93 1442.51 1264.77 1963.31 1865.6100000000001 2023.35 2049.0299999999997 True False 2322.454231070593 2364.6920968692157 1944.327722719329 2140.375093849768 1924.5452576708367 1430.7626768226667 1312.9015144586995 1924.150241863101 1787.2048995335347 1895.5953356929294 1797.0122998713573 1.2923975151627234 1.315902009707166 1.0819779713575235 1.1910742592040082 1.0709694406702777 0.7961896960444237 0.7306024085381531 1.0707496225823525 0.9945423855259506 1.054859410716682 1.0 10.811384568247105 -6.349792535679343 1.2067556595321824 0.971245959583103 1.2914524365725712 0.5582213534586999 0.11390771964770144 0.31704421867464394 0.8349288497171312 0.01786055100075909 0.07637064387816268 4.46897025777281e-07 6.349792535679343 0.32020647698946825 LFEELGK ddPTM_A549_MK2206_60min_R1 2 LFEELGK 7 0 P34932 P34932 HSPA4 Heat shock 70 kDa protein 4 0 ; 81.297 0.042876 2851300.0 2404.33 2418.0 2665.8 2599.7 3470.5 2855.1000000000004 2754.1 2529.8 3496.8 3547.7 3491.5 False True 2810.122123775223 2541.0658718869586 3043.8505253341805 3236.626616704966 2959.9940473435495 3157.2247869380035 3254.484320352167 2888.406897187573 2704.780383242159 2746.2721060153417 2624.464189502192 1.0707412716910596 0.9682227260143899 1.1597988410394495 1.2332523452411401 1.1278469941344489 1.2029978536445054 1.2400566688507482 1.1005701311304408 1.0306028918440688 1.0464124894522773 1.0 11.357807196944986 -8.701953995478863 3.304569422870643 1.0134427326040378 1.143751103297303 0.3253226110119817 0.07332174373987971 0.19515969908038627 4.278715541341633 0.013689936406027125 0.015217129740332198 1.9863053141939185e-09 8.701953995478863 0.13030837069326506 LFEELGK ddPTM_A549_PD325901_60min_R1 2 LFEELGK 7 0 P34932 P34932 HSPA4 Heat shock 70 kDa protein 4 0 ; 82.671 0.011238 2252600.0 3816.2 3002.2 3728.5 3502.2 4219.6 3699.8 3157.7 3727.0 3681.5 3765.6 3934.8 False True 4203.617814662045 3255.205930221816 3981.5384312918845 3718.5229399267096 3923.2298528297406 3669.6700554647787 3277.8680014597426 3652.6620612250613 3526.779357761112 3527.8393733586818 3450.8445447523036 1.2181417505620422 0.9433070333962174 1.1537866686422042 1.0775689520936156 1.1368897676934746 1.06341216124767 0.9498741420978797 1.0584835143558295 1.0220047040728863 1.0223118797754782 1.0 11.752733768703129 -7.530267136565748 24.40283776755496 1.0107158070234867 1.0982023588131382 0.3112241305317175 0.06725141889909217 119.15000525241807 393534.10095738684 0.009071635852306286 0.013473071772888581 2.949394482262959e-08 7.530267136565748 0.08748655178965148 LFEES(ph)DDKEDEDADGK ddPTM_A549_PD325901_60min_R1 2 LFEESDDKEDEDADGK 16 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEES(1)DDKEDEDADGK;LFEES(1)DDKEDEDADGK 139.98 7.3236e-12 29245000.0 8353.4 8691.900000000001 10104.7 9438.400000000001 9472.0 6775.6 7807.9 6485.1 8308.0 8134.5 7797.2 True False 9201.431018551939 9424.396917225706 10790.465706497282 10021.388531838344 8806.719396626053 6720.421760043017 8105.033907146818 6355.749593037466 7958.843651848241 7620.886281757542 6838.1938305232 1.3455937703140428 1.3781997338476484 1.5779701444455383 1.4655022627622114 1.2878721508764601 0.9827773132205625 1.1852594571053114 0.9294485869452429 1.1638809675623512 1.1144589449542492 1.0 12.739399601608788 -7.029863149566081 3.5398064495164525 1.070292759905402 1.4446764711726656 0.7939452011094781 0.09062135663905518 0.08330928767241706 2.1827229859226085 0.014107946046372796 0.02634789257297999 9.335484246824586e-08 7.029863149566081 0.37438371126726366 LFEES(ph)DDKEDEDADGKEVEDADEK ddPTM_A549_MK2206_60min_R1 3 LFEESDDKEDEDADGKEVEDADEK 24 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK 111.68 4.2022e-12 24180600.0 3778.65 4418.530000000001 3617.29 3675.32 5106.8 5029.7 3866.64 4843.030000000001 6134.3 5589.6 6105.0 True False 4416.393740877187 4643.414303932458 4130.276114782083 4575.773564991384 4355.596484937055 5561.939515555348 4569.158437401148 5529.544333657335 4744.89084446419 4326.905477854205 4588.960010571637 0.9623953424529943 1.011866369119664 0.9000462207705276 0.9971264849661197 0.9491467510945878 1.2120261459551287 0.9956849540800373 1.2049667726279731 1.033979558229606 0.9428945704225501 1.0 12.16395151943551 LFEES(ph)DDKEDEDADGKEVEDADEK ddPTM_A549_PD325901_60min_R1 3 LFEESDDKEDEDADGKEVEDADEK 24 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK 189.7 2.949599999999999e-51 206103400.0 12776.2 11962.9 13457.2 15573.199999999999 14352.500000000002 8865.2 11218.800000000001 10841.8 10686.8 12133.0 11824.8 True False 14073.230418658663 12971.055566801193 14370.48651671749 16535.121194696643 13344.429913437018 8793.004750447693 11645.73757316292 10625.551793772438 10237.670960348072 11366.920309369272 10370.424563583168 1.3570544129965791 1.250773821965825 1.3857182440901175 1.594449782968525 1.2867775886724426 0.8478924557558858 1.122975968993415 1.0246014257781861 0.9871988265840846 1.0960901590553394 1.0 13.340187338622252 -7.09654119009584 5.451102917189267 0.9987423351379768 1.39205111439662 0.7656613604774878 0.10070970731507235 0.07259217402952148 3.2759320152309552 0.013737202783267864 0.024138292171311217 8.00679685480985e-08 7.09654119009584 0.39330877925864327 LFEGNALLR ddPTM_A549_MK2206_60min_R1 1 LFEGNALLR 9 0 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 81.594 0.004378 3338800.0 671.36 816.57 724.97 562.34 1347.0 1106.0 981.73 1017.0 1313.9 1012.2 1416.8 False True 784.6691548238938 858.1299251475323 827.7816472921902 700.1133252444015 1148.8580843601096 1223.0361858966182 1160.0976332810478 1161.1628644318766 1016.3037478671562 783.543316996569 1064.9694583092382 0.7367996788092369 0.8057789061011312 0.777282053333613 0.6574022567331763 1.078770921923014 1.1484237189659214 1.0893247916450455 1.090325037372768 0.9543031867605438 0.7357425237720285 1.0 10.056596341425298 -6.765267462022761 24.999996544855698 1.013962782083136 0.7510606782557053 0.591442374408474 0.10770676261807946 39.96191491962739 260981.10070722885 0.0116551672107077 0.022632765818925062 1.7168507320054357e-07 6.765267462022761 -0.26290210382743073 LFEGNALLR ddPTM_A549_PD325901_60min_R1 2 LFEGNALLR 9 0 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 ; 98.03299999999999 0.0023433000000000004 13157400.0 2699.8 3241.7 2488.1000000000004 2833.4 3817.6 3408.7 3419.4 3461.2 3916.8 3669.3 3571.6000000000004 False True 2973.8817085122846 3514.8894357471404 2656.957428160746 3008.412682881715 3549.464946005029 3380.940677350882 3549.527138167476 3392.1636507411285 3752.190517038903 3437.6197717933437 3132.315842237811 0.9494194896986069 1.1221376172704245 0.8482405868312897 0.9604435933039319 1.133175939074265 1.0793741268873598 1.1331957940842894 1.0829570904055688 1.1978966062241785 1.0974690755761767 1.0 11.613013976555514 -6.755207943192948 24.995473901431467 1.0989187468739183 0.9722215524484833 0.42489068598880375 0.07451274843560517 142.1844182349992 570323.5656319339 0.012683044562173092 0.025892433245238017 1.7570821094843592e-07 6.755207943192948 -0.12669719442543503 LFFVDT(ph)GSKEK ddPTM_A549_MK2206_60min_R1 1 LFFVDTGSKEK 11 1 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 LFFVDT(0.5)GS(0.5)KEK 40.475 0.039449 3188600.0 847.71 1127.9 847.72 939.11 1501.9 959.91 994.9 1224.5 1631.7 1621.9 1596.9 True False 990.7827234803431 1185.3052923495864 967.9394430701075 1169.1919921582494 1280.9724995549 1061.487039063311 1175.660451805807 1398.0766248739762 1262.122555289474 1255.5116635415288 1200.3456578021046 0.8254145104290358 0.9874699713746973 0.806383925145741 0.9740460879402861 1.067169686688772 0.8843178064283158 0.9794349187370766 1.1647283561919384 1.0514659232412154 1.0459584332070115 1.0 10.229234196320025 -6.559284788743602 0.7914396724063004 1.030623879351038 0.8670116339441842 0.39943199149095465 0.07919087624456869 0.6750827593698486 0.7080286684683414 0.013276470681787061 0.06591161385450263 2.7587681998259205e-07 6.559284788743602 -0.16361224540685382 LFFVDTGS(ph)KEK ddPTM_A549_MK2206_60min_R1 1 LFFVDTGSKEK 11 1 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 LFFVDT(0.154)GS(0.846)KEK 68.03399999999999 0.0012012000000000001 3329700.0 1007.7 853.23 930.04 928.44 1631.0 1003.0 1134.3 997.32 1830.5 1565.0 1259.1 True False 1177.7751241003898 896.655762560012 1061.9336569066702 1155.907841679256 1391.0820605726346 1109.136794262485 1340.387627382979 1138.6931641644042 1415.894672707839 1211.4654130602948 946.430720607821 1.2444388146487826 0.9474077109248501 1.122040561220023 1.2213338139921153 1.4698192168564095 1.1719154610177596 1.4162554090828214 1.2031447620731368 1.4960362569365 1.2800360202617496 1.0 9.886353093280448 -6.264894656631148 4.007104862513149 1.2620561875243883 1.085200223580088 0.2106666309302061 0.1501329536689809 0.348145864814321 13.228766707053788 0.02760379662997326 0.07239749201531956 5.433821194005117e-07 6.264894656631148 -0.17685596394430037 LFFVDTGS(ph)KEK ddPTM_A549_PD325901_60min_R1 2 LFFVDTGSKEK 11 1 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 LFFVDT(0.116)GS(0.884)KEK;LFFVDT(0.149)GS(0.851)KEK 96.59100000000001 7.8485e-05 9753600.0 4191.0 4126.299999999999 4335.5 5281.4 5544.6 5338.1 4849.5 4683.9 5715.1 5538.9 5020.9 True False 4616.467234748868 4474.037782251107 4629.73310147941 5607.620083070335 5155.166423831589 5294.628283441411 5034.050376248223 4590.475940051533 5474.9142217956105 5189.172908725411 4403.361130107465 1.0483962360443968 1.0160506145317945 1.051408904398995 1.273486302254178 1.1707344166218263 1.2024061000220971 1.1432290533312142 1.042493632571876 1.2433489009932723 1.1784572637581436 1.0 12.104389452636717 -6.026067784773634 24.61139783270329 1.133811849182223 1.0325999479079742 0.28506685928493947 0.0777090689643974 802.5353572767158 757699.1736236672 0.013967388746699167 0.03710703386451905 9.417425976695815e-07 6.026067784773634 -0.10121190127424895 LFGAPEPS(ph)TIAR ddPTM_A549_MK2206_60min_R1 2 LFGAPEPSTIAR 12 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 LFGAPEPS(0.5)T(0.5)IAR;LFGAPEPS(0.5)T(0.5)IAR 67.08 0.0049597 2122080.0 1200.19 1648.6799999999998 1624.08 1620.21 2621.3 1712.22 1581.06 1722.7199999999998 2697.3 2058.6 2694.7 True False 1402.7527301717246 1732.5907699183585 1854.3989651079357 2017.161522733992 2235.7102424151117 1893.405983920349 1868.3181364278719 1966.920835608734 2086.3658567030056 1593.5608302402063 2025.5316200634545 0.6925355873376986 0.8553758197386625 0.9155122273775427 0.9958677034480456 1.1037646710966047 0.9347698970312956 0.9223840881680941 0.9710639992611498 1.030033713636939 0.7867370790243622 1.0 10.984084891410786 -5.374792616224565 1.1917873836628445 1.004530149010787 0.5906777847646713 0.45840534456912974 0.08118167568004621 0.4223444565368512 0.5648348483417562 0.007312407076701828 0.20436434099453465 4.21897919518738e-06 5.374792616224565 -0.4138523642461157 LFGGFNSSDTVT(ph)SPQR ddPTM_A549_MK2206_60min_R1 1 LFGGFNSSDTVTSPQR 16 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 LFGGFNSSDT(0.005)VT(0.841)S(0.153)PQR 135.47 2.4536e-10 41124000.0 2825.5 3206.9 3369.1 2709.0 3931.8 3135.3 3066.3 3429.9 5441.6 4661.3 4865.6 True False 3302.375323157342 3370.117512222616 3846.889040777021 3372.7051216116297 3353.437428423964 3467.0753649562985 3623.407019169913 3916.0988286282145 4209.086288449591 3608.309092586551 3657.337236271479 0.9029452603949621 0.9214675307487714 1.051827816867876 0.9221750425864416 0.9169068127397161 0.9479780345579656 0.9907226993548572 1.0707513624367146 1.150860863118163 0.9865945794665327 1.0 11.836577945704182 -8.097464383777778 2.927435830047994 1.0732423067262116 0.9461176440428571 0.43497840848479863 0.05562869300148094 0.18494911524732657 3.07772044698935 0.010607580681478159 0.014152110710133592 7.989794627929538e-09 8.097464383777778 -0.12712466268335443 LFGGFNSSDTVT(ph)SPQR ddPTM_A549_PD325901_60min_R1 3 LFGGFNSSDTVTSPQR 16 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 LFGGFNSSDTVT(0.5)S(0.5)PQR;LFGGFNSSDT(0.006)VT(0.671)S(0.323)PQR;LFGGFNSSDTVT(0.5)S(0.5)PQR 194.58 4.2611e-39 131268000.0 19180.100000000002 18006.7 19894.4 21289.3 24951.800000000003 24008.300000000003 21916.9 23266.300000000003 24201.6 23996.399999999998 23492.100000000002 True False 21127.249632356652 19524.18780351914 21244.55361874569 22604.291709491667 23199.271647036945 23812.78436472651 22750.959622887858 22802.235394440755 23184.49091533107 22481.263208748744 20602.72062869157 1.0254592106119527 0.9476509513180286 1.0311528269310362 1.097150814053785 1.1260295213016376 1.1558077592706164 1.1042696754915282 1.1067584619230393 1.1253121048025132 1.0911793453841767 1.0 14.330547240179092 -6.022137326168928 4.66371486545107 1.0804266371261748 0.9862051215102673 0.4815227464969226 0.04368288033456945 0.18162853876106463 10.114274148771544 0.008342817112924129 0.024812577793010816 9.50304255005854e-07 6.022137326168928 -0.09422151561590753 LFGGFNSSDTVTS(ph)PQR ddPTM_A549_MK2206_60min_R1 1 LFGGFNSSDTVTSPQR 16 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 LFGGFNSSDT(0.004)VT(0.441)S(0.555)PQR 154.02 3.8694e-20 36662000.0 5206.4 4983.7 5042.4 4381.8 7084.0 4635.1 4807.4 5020.8 7219.4 7659.6 7276.0 True False 6085.113035741066 5237.349042896212 5757.488142000555 5455.341196706479 6041.952984118055 5125.583205469629 5680.842352006465 5732.513775555127 5584.217427012819 5929.291040176768 5469.168392615761 1.1126212613890125 0.9576134188823768 1.0527172924084895 0.9974717918855908 1.1047297414129071 0.9371778006305262 1.0387031344064113 1.0481509004723504 1.0210359283419381 1.084130276219369 1.0 12.417105767212231 -9.2220625575672 0.004249236587609673 0.004929429630968563 2.0284649819769225 0.0 0.05591992812214824 16483.47495529899 40.538456095828124 9708.83175657872 9594.248576896742 5.997046860988791e-10 9.2220625575672 2.0235355523459537 LFGGFNSSDTVTS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 LFGGFNSSDTVTSPQR 16 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 LFGGFNSSDT(0.001)VT(0.031)S(0.968)PQR 241.39 2.0957999999999996e-65 47062000.0 5787.0 5064.6 6525.7 5851.1 6908.1 6740.9 6093.3 6301.3 6907.7 6598.8 7594.4 True False 6374.491979835763 5491.411616215247 6968.573244221933 6212.509158187756 6422.898887651232 6686.0043453382705 6325.183865881697 6175.615628225778 6617.39339117382 6182.150641841743 6660.336944868077 0.9570825068763882 0.8244945656160068 1.046279385248123 0.9327619923155117 0.9643504436513838 1.0038537690634362 0.9496792607099822 0.9272227034976381 0.9935523451666592 0.9282038871329497 1.0 12.701379449405165 -2.000000000034556 0.17669003781260562 1.0059476287848634 0.616368998099119 0.0 0.05562291180947361 58.56592952876766 0.6083731374484987 0.05277315319365054 6.160873528073149 0.00999999999920432 2.000000000034556 -0.3895786306857444 LFIGGLNTETNEK ddPTM_A549_MK2206_60min_R1 1 LFIGGLNTETNEK 13 0 P38159;P38159-2;H0Y6E7;H3BT71;Q96E39;H3BR27;A0A1B0GUK8;P38159-3;H3BNC1 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 0 164.65 1.5841000000000001e-18 2199800.0 2106.1 2416.9 2980.2 2323.8 3002.4 2634.1 2568.0 2000.1 3367.0 3360.2 3642.1 False True 2461.5581907986825 2539.909886585439 3402.837172931549 2893.1311043193473 2560.7509372552295 2912.8387136259303 3034.5723592695854 2283.620300049358 2604.37987599415 2601.1284862397483 2737.666053153639 0.8991447981623267 0.9277646861492124 1.2429701456872981 1.0567874416189735 0.9353773935668256 1.0639861316432302 1.1084523460317326 0.8341485980069608 0.9513139387450303 0.950126288501621 1.0 11.41873075870768 LFIGGLNTETNEK ddPTM_A549_PD325901_60min_R1 2 LFIGGLNTETNEK 13 0 P38159;P38159-2;H0Y6E7;H3BT71;Q96E39;H3BR27;A0A1B0GUK8;P38159-3;H3BNC1 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 0 ; 180.97 1.3391e-24 4500200.0 5987.0 5879.799999999999 5835.9 6677.4 7659.4 7090.6 6729.0 7396.4 7521.3 7445.1 6820.5 False True 6594.795832603545 6375.311381159893 6231.959268117556 7089.847832524301 7121.430167495527 7032.856504480935 6985.075777250083 7248.872999636448 7205.2059170253 6975.01511541129 5981.6217387117795 1.1025096739105773 1.0658165393341805 1.0418511133503554 1.1852718446972865 1.1905517397409386 1.1757441061452931 1.167756184254207 1.211857472150619 1.2045572641938798 1.1660742554599333 1.0 12.546320965941971 -3.784633925442888 12.875240827859864 1.119785256194654 0.5838317414864493 0.0 0.07145790585657 0.0 0.0 0.012064910036695372 0.0 0.00016419732385434925 3.784633925442888 -0.5359535147082046 LFIHNHEQHHK ddPTM_A549_MK2206_60min_R1 2 LFIHNHEQHHK 11 0 Q02809;Q02809-2 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 0 ; 49.35 0.010668 6787200.0 1718.28 1385.5 1437.83 1195.24 1546.94 1335.37 1399.21 1025.88 1729.47 2240.5 2043.9 False True 2008.2836560873461 1456.0160320510251 1641.7359144876748 1488.0738536563629 1319.3871752190273 1476.6779670531346 1653.4283453323974 1171.3016316257363 1337.7478063960803 1734.3694939051695 1536.343221229708 1.3071842465512955 0.9477153359557327 1.0685997059782053 0.9685816509577139 0.8587841290847585 0.9611641114094176 1.0762102650532561 0.7623958080722432 0.8707349945706341 1.1288945529482395 1.0 10.585284836822582 -2.3042232837095344 1.0177518323391166 0.9349746851328467 199.98705620991655 0.4455738215742223 0.10520656392902704 493.57800552471224 1.1916128039083103 0.013349798239588801 228432.69229484675 0.004963370741894118 2.3042232837095344 199.0520815247837 LFIHNHEQHHK ddPTM_A549_PD325901_60min_R1 2 LFIHNHEQHHK 11 0 Q02809;Q02809-2 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 0 ; 78.655 0.00038602 9938700.0 949.3299999999999 1017.5699999999999 975.1100000000001 821.36 1070.6399999999999 1481.32 854.3499999999999 1019.81 1080.67 1210.7199999999998 1093.56 False True 1045.705282740191 1103.324195062225 1041.2868284127749 872.0935417560966 995.4419399074872 1469.2566210500804 886.8627567682584 999.469089524532 1035.2531980311562 1134.2749325772324 959.059052647995 1.090345041687436 1.1504236282592912 1.085737969458446 0.909322047842848 1.0379360240217093 1.531977219748265 0.9247217408767476 1.042135087265965 1.0794467714712526 1.182695611334318 1.0 9.905475839574422 -10.007465364720652 0.5360725963058787 0.9982264382170022 1.1021059355061742 0.0 0.16344406891546376 2.5016636877467597 1.388980066642646 0.11853053073034671 0.03972585081660982 9.829572613821879e-11 10.007465364720652 0.10387949728917201 LFLDHDKTLQTDSIDS(ph)FETQRTPR ddPTM_A549_MK2206_60min_R1 1 LFLDHDKTLQTDSIDSFETQRTPR 24 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 LFLDHDKTLQTDSIDS(0.838)FET(0.122)QRT(0.04)PR 165.46 7.302199999999999e-35 13846000.0 2280.7 2044.5 2383.5 1818.1 2749.2 1849.6 1646.6 1591.4 3725.0 3655.0 3832.8 True False 2665.626402238522 2148.5563172344455 2721.5161404208948 2263.5345816176105 2344.796321843219 2045.3234443348863 1945.7659060643698 1816.9858234581006 2881.293447602675 2829.3329614922573 2881.0099801013894 0.9252402527757688 0.7457649685610713 0.9446396087545377 0.7856739814340912 0.8138799719675738 0.7099327869259608 0.6753763157723923 0.6306766849152521 1.0000983917109776 0.982062881084739 1.0 11.492358942805772 -8.78974226476968 24.90697881269897 1.0000465341704665 0.7789607248528949 0.5312594468905014 0.08995945895190355 108.40552995654478 95398.03836199277 0.015825809139274977 0.01684948165725108 1.6227728580496662e-09 8.78974226476968 -0.2210858093175716 LFLDHDKTLQTDSIDSFET(ph)QRTPR ddPTM_A549_MK2206_60min_R1 1 LFLDHDKTLQTDSIDSFETQRTPR 24 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 LFLDHDKTLQTDSIDS(0.001)FET(0.601)QRT(0.397)PR 175.76 9.985599999999999e-42 15466000.0 1706.1 2856.5 2614.5 2171.9 2935.7 1853.0 1471.3 1458.2 4066.1 4127.9 4109.8 True False 1994.0479698597542 3001.883648902025 2985.275413941862 2704.015597500296 2503.8624188982744 2049.083230078149 1738.6161651843236 1664.9043155502093 3145.1348422274496 3195.4045230489414 3089.223235290308 0.6454852297756866 0.9717276545797846 0.966351469793125 0.8753059884473475 0.8105152098737777 0.6633004719989385 0.5628004299990118 0.5389394643063893 1.0180989208867863 1.0343715166148086 1.0 11.593028412283363 -8.81081214036038 24.998365090141963 1.0085469442841002 0.7651091105743526 0.41090536533337085 0.1397993533813254 89.06516394184384 45094.95932569407 0.026507397331026215 0.028219298516456014 1.5459230037219766e-09 8.81081214036038 -0.2434378337097476 LFLDHDKTLQTDSIDSFET(ph)QRTPR ddPTM_A549_PD325901_60min_R1 1 LFLDHDKTLQTDSIDSFETQRTPR 24 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 LFLDHDKTLQTDSIDS(0.001)FET(0.771)QRT(0.228)PR 227.09 9.919399999999998e-89 36807000.0 4035.2 4813.3 5140.6 5118.6 5655.1 8138.0 6241.7 8394.2 6094.8 5877.1 6399.9 True False 4444.8505334427655 5218.933683277823 5489.472028939002 5434.764296815957 5257.905285035898 8071.726826145302 6479.231309089296 8226.771095877495 5838.656751237928 5506.018903007843 5612.752872308701 0.7919198715076261 0.9298349316297463 0.978035583220148 0.9682885422640154 0.9367783340286558 1.4381047963056226 1.1543767303662142 1.4657283659263565 1.0402483209342346 0.9809836684904755 1.0 12.454492823964873 -5.99344339077858 1.0637452612103142 1.0885935326136438 0.8194907409450332 0.2786552738906509 0.17097769571336338 0.9661976201921337 1.6411730631740862 0.028048426865436484 0.21793467163264302 1.0152116883042564e-06 5.99344339077858 -0.2691027916686106 LFLDHDKTLQTDSIDSFETQRT(ph)PR ddPTM_A549_MK2206_60min_R1 1 LFLDHDKTLQTDSIDSFETQRTPR 24 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 LFLDHDKTLQTDSIDS(0.298)FET(0.215)QRT(0.486)PR 117.03 5.3842e-16 36755000.0 440.07 651.91 875.0 814.0 855.03 595.08 518.93 472.74 1087.2 936.83 915.0 True False 514.343057321483 685.0894344672568 999.0881572763925 1013.4300365418488 729.2562196513919 658.0509706178653 613.2128638612797 539.7523427055311 840.9509359016456 725.1994523433077 687.7802472846926 0.7478305161453426 0.996087685233679 1.4526270000057742 1.4734794151806458 1.0603041051708646 0.956775035653908 0.8915825458526913 0.7847744171723962 1.2227029479570837 1.0544057570806133 1.0 9.42580387273215 -6.952646145652484 24.998936968152638 1.0520288787589276 1.1870356845415109 0.09004362008737932 0.2174301634775102 281.6746486096826 148699.66661984808 0.03424032748727197 0.06470815661849413 1.1152028081800445e-07 6.952646145652484 0.13500680578258328 LFLDHDKTLQTDSIDSFETQRT(ph)PR ddPTM_A549_PD325901_60min_R1 3 LFLDHDKTLQTDSIDSFETQRTPR 24 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 LFLDHDKTLQTDSIDS(0.027)FET(0.289)QRT(0.684)PR;LFLDHDKTLQTDSIDSFET(0.336)QRT(0.664)PR;LFLDHDKTLQTDSIDSFET(0.035)QRT(0.965)PR 279.23 5.043499999999998e-140 225049000.0 9569.0 10394.0 11756.0 12860.8 13851.5 18751.1 14641.7 15880.800000000001 15297.900000000001 13891.0 16486.4 True False 10540.437835674522 11269.938857746176 12553.83285457085 13655.18240700401 12878.618425080853 18598.3972585074 15198.897905745676 15564.0449857534 14654.982462880278 13013.919889347111 14458.677315900271 0.7290042930886323 0.7794584948204477 0.8682559670078082 0.944428187216499 0.8907189878923558 1.286313875893382 1.051195595120681 1.0764501237355613 1.0135769782180648 0.9000767916049724 1.0 13.819647959703529 -6.162402703316149 1.1986373001826915 1.0305408084965728 0.7334097276640633 0.5620381224239048 0.09689217743083073 0.29920634833165144 0.7334399477230638 0.01355927647725738 0.07289711279502756 6.880140335069159e-07 6.162402703316149 -0.2971310808325095 LFLINEQS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LFLINEQSPR 10 0 Q6NW34;Q6NW34-2;E9PFF8 Q6NW34 C3orf17 Uncharacterized protein C3orf17 1 LFLINEQS(1)PR;LFLINEQS(1)PR 108.9 0.00022756 4952100.0 3221.6 3666.6 3741.9 3350.7 4901.799999999999 4548.700000000001 4187.7 3869.4 5277.6 5005.4 4953.200000000001 True False 3765.327319442113 3853.2142786851596 4272.557686528609 4171.62165041864 4180.7517133751935 5030.040414817309 4948.550883533195 4417.899299540516 4082.232026595404 3874.6766635987233 3723.1837386344687 1.01131923207827 1.0349245562880498 1.1475548848673345 1.1204447438709113 1.1228969631535146 1.351005152558533 1.3291180964784046 1.1865918014459431 1.096435822985363 1.0406890810658238 1.0 11.862321099421445 -9.398911013246872 1.3699340992586122 1.0256104657941725 1.1644475753965735 0.22149101080759026 0.09998747894100649 0.4078693327859209 1.5805381606890083 0.02632946875494552 0.021611788688943128 3.991066707704145e-10 9.398911013246872 0.13883710960240103 LFNLSKEDDVR ddPTM_A549_PD325901_60min_R1 1 LFNLSKEDDVR 11 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 56.205 0.015757 3531400.0 1807.5 1914.5 1950.7 1803.5 2675.5 2388.1 2133.3 2341.9 2479.0 2052.3 2562.5 False True 1990.9960693888281 2075.841633938335 2083.086232512024 1914.8980989543202 2487.5821099739255 2368.652105372031 2214.483898886552 2295.1889673149917 2374.8162509547196 1922.7174277522918 2247.328745025867 0.8859389503185087 0.9236929125446849 0.9269165613275894 0.852077428899829 1.1069061949569345 1.0539855864944974 0.9853849392475346 1.021296493623844 1.0567284631636682 0.8555568169578861 1.0 11.133995465756445 -6.753981586797462 24.99999991421961 1.030471135601726 0.9011776404938544 0.40739950793223234 0.06363079316294815 68.11699330979864 228339.6593488243 0.005402311558764224 0.011072701785512363 1.7620507521952472e-07 6.753981586797462 -0.12929349510787158 LFPADT(ph)SPSTATK ddPTM_A549_PD325901_60min_R1 2 LFPADTSPSTATK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 LFPADT(0.648)S(0.35)PS(0.001)TATK;LFPADT(0.48)S(0.48)PS(0.028)T(0.01)AT(0.002)K 113.99 2.1929e-05 207330000.0 6646.4 6369.7 8209.7 6402.0 8077.700000000001 7863.9 7381.200000000001 9161.0 6663.6 7168.1 7729.6 True False 7321.137635178922 6906.4969734640945 8766.859610936574 6797.437000003081 7510.350218552181 7799.859005667731 7662.095605147623 8978.276668334525 6383.552065293207 6715.504942684399 6778.908201971491 1.07998772325162 1.0188214337310981 1.293255395962868 1.0027333012159985 1.1078996786485422 1.150606966974316 1.1302846087986969 1.324442874993262 0.9416784938077044 0.9906469806939335 1.0 12.72683721902099 -8.84163491346618 24.999999196630153 0.9724586875744214 1.134280404170348 0.3651229809544765 0.09440446925079217 21.831746181219273 6804.3554239574305 0.01565878401507207 0.016670014957777958 1.4400086024641256e-09 8.84163491346618 0.1618217165959266 LFPADTS(ph)PSTATK ddPTM_A549_MK2206_60min_R1 2 LFPADTSPSTATK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 LFPADT(0.003)S(0.857)PS(0.07)T(0.07)ATK;LFPADT(0.169)S(0.586)PS(0.1)T(0.143)AT(0.002)K 250.21 1.2579999999999998e-68 140531000.0 9767.7 11039.3 11083.400000000001 9224.1 14459.8 11334.5 11391.6 10819.4 15306.5 13939.0 15433.2 True False 11416.248962662878 11601.153217337347 12655.192779836774 11484.004914085586 12332.782574781237 12533.909266767821 13461.306264741208 12353.083083022864 11839.602189457819 10790.170218944057 11600.710505348765 0.9840991168083336 1.000038162489132 1.0908980768032972 0.9899397893595079 1.0631057958988748 1.0804432419021908 1.1603863624158688 1.0648557325283827 1.0205928493775367 0.9301301169414589 1.0 13.501925547932668 -4.403434059057338 16.290580296245224 1.0312005483048723 1.040244244565477 0.0 0.06106743482184288 0.0 0.0 0.007475948454998934 0.0 3.9497166517368584e-05 4.403434059057338 0.009043696260604639 LFPDT(ph)PLALDANK ddPTM_A549_PD325901_60min_R1 2 LFPDTPLALDANK 13 0 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 LFPDT(1)PLALDANK;LFPDT(1)PLALDANK 219.61 3.6824999999999997e-38 58035000.0 21316.5 23296.5 22806.2 22798.9 26383.6 23116.8 24177.3 24232.0 28046.0 25057.9 27144.0 True False 23480.535387622098 25259.777814073845 24353.965876821527 24207.13627294132 24530.506954478806 22928.544445150616 25097.38038182621 23748.67375036375 26867.324152592188 23475.73991759202 23805.460079993016 0.9863508333265109 1.0610917717697501 1.0230411760573153 1.0168732799785662 1.030457167055349 0.963163256164942 1.0542699152838038 0.9976145670178838 1.1286202435202028 0.9861493892034415 1.0 14.53900489118725 LFPDT(ph)PLALDANKK ddPTM_A549_MK2206_60min_R1 2 LFPDTPLALDANKK 14 1 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 LFPDT(1)PLALDANKK;LFPDT(1)PLALDANKK 114.59 2.6291000000000004e-06 14519100.0 4353.4 4838.4 4435.0 4042.4 6120.0 4734.2 4396.6 4464.8 6605.6 6339.200000000001 6389.0 True False 5088.147489588806 5084.653893522687 5063.949688595199 5032.788181470231 5219.756107114979 5235.1699016923785 5195.405309487796 5097.699072876541 5109.442146975634 4907.170317234393 4802.434972570386 1.0594932609499759 1.058765797468206 1.0544546084472737 1.0479659194170317 1.0868978209862636 1.0901074000155346 1.0818273103460851 1.0614821651917385 1.063927398529861 1.0218088001737065 1.0 12.229550363855259 -10.466510044785478 0.6977908688576608 0.9975108172791052 1.0681554576213816 0.6934640204837395 0.014223013411800902 0.29798976329130644 0.24970627098836604 0.011712457717011128 0.0029923372179764493 3.415780502450859e-11 10.466510044785478 0.07064464034227647 LFPDT(ph)PLALDANKK ddPTM_A549_PD325901_60min_R1 2 LFPDTPLALDANKK 14 1 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 LFPDT(1)PLALDANKK;LFPDT(1)PLALDANKK 98.796 2.3069000000000002e-05 25531700.0 10936.599999999999 11408.6 12806.0 12321.2 13456.6 13210.6 13754.7 14792.3 14152.9 13909.8 13841.8 True False 12046.875580900607 12370.04276048518 13675.09216873378 13082.25254052452 12511.454838749816 13103.017253560469 14278.142635360648 14497.25597216514 13558.102831035512 13031.532854138688 12139.34635039963 0.9923825577728921 1.0190040224099837 1.1265097620584483 1.0776735553058712 1.0306530909992477 1.0793840850524143 1.1761871045792023 1.1942369509613577 1.1168725596653872 1.0734954319603613 1.0 13.567403120547896 -5.588156635427811 7.182933098146918 1.0785508374381658 0.9988170881962632 0.23590375964235677 0.05658948109301898 0.2802093677296529 25.07799382305555 0.009665476071393736 0.038193952636716814 2.581329024075242e-06 5.588156635427811 -0.07973374924190257 LFPELEERS(ph)LETAR ddPTM_A549_MK2206_60min_R1 2 LFPELEERSLETAR 14 1 Q9H6A9 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 LFPELEERS(0.815)LET(0.185)AR;LFPELEERS(0.975)LET(0.025)AR 51.265 0.0067363 14591900.0 743.54 560.3 574.05 353.78 679.44 548.47 578.83 676.58 680.41 968.6800000000001 969.8199999999999 True False 869.0313741923228 588.8168767652038 655.4589219251578 440.4561158817877 579.4952760487254 606.5087313550795 683.9959185031211 772.4872869393498 526.2982213914997 749.8545152225216 728.9869283296617 1.1921083086956674 0.8077193895840744 0.899136728592679 0.6042030367965735 0.7949323280412328 0.8319884867411569 0.9382828304896643 1.0596723437954656 0.7219583794148606 1.028625461008847 1.0 9.50974913518695 -11.176984401189669 1.5875115819165233 0.9999602289095004 0.8455228142307838 0.09100298564850673 0.15269962837792433 0.6967779868747723 3.1553915533156824 0.11121984514024881 0.023476046492244374 6.652970516380947e-12 11.176984401189669 -0.15443741467871663 LFPELEERS(ph)LETAR ddPTM_A549_PD325901_60min_R1 1 LFPELEERSLETAR 14 1 Q9H6A9 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 LFPELEERS(1)LETAR 138.08 6.609e-10 14741000.0 579.86 768.41 734.84 890.81 710.01 648.14 701.82 522.65 646.6 590.49 843.71 True False 638.7269603296293 833.1666074351293 784.7106613518918 945.8333105237026 660.1413470015269 642.861762730132 728.5281441506402 512.2253357390066 619.42565061207 553.2063606263462 739.9390187183513 0.8632156761187814 1.1259936107684354 1.060507206000691 1.2782584599498223 0.8921564214101833 0.8688037074239349 0.9845786284017352 0.6922534462721432 0.8371306755588823 0.7476377736972908 1.0 9.53126256724901 LFPGS(ph)PAIYK ddPTM_A549_MK2206_60min_R1 2 LFPGSPAIYK 10 0 P49792;Q7Z3J3;H0YBN8;C9J6W1;Q7Z3J3-2;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37;F8W705;Q99666-2;C9J1W9;C9JF75 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD8;RGPD5;RGPD3;RGPD1;RGPD2;RGPD6 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 LFPGS(1)PAIYK;LFPGS(1)PAIYK 127.51 1.5644e-06 10230200.0 6529.9 7362.0 6814.4 6973.2 9243.5 7833.9 6570.4 7044.6 10254.0 10444.900000000001 11180.0 True False 7631.98747927274 7736.694354355579 7780.78438736486 8681.634313038841 7883.79339479041 8662.878098278043 7764.156631364831 8043.193623182698 7931.485372273251 8085.389835701902 8403.697447697119 0.9081701866080564 0.9206298064045225 0.9258763104920017 1.033073164172264 0.9381338921180249 1.0308412638834288 0.9238976866655828 0.9571017606526029 0.9438090104548839 0.9621229091151486 1.0 13.036808507291298 -9.667748560549121 0.006369561645074567 1.94206276638213 5.165017383175406e-07 0.11186184885436112 0.039568211474776446 6283.97282300985 16.423320588620882 2542.0429487236074 2464.733954148171 2.1490743436737902e-10 9.667748560549121 -1.9420622498803917 LFPGS(ph)PAIYK ddPTM_A549_PD325901_60min_R1 2 LFPGSPAIYK 10 0 P49792;Q7Z3J3;H0YBN8;C9J6W1;Q7Z3J3-2;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37;F8W705;Q99666-2;C9J1W9;C9JF75 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD8;RGPD5;RGPD3;RGPD1;RGPD2;RGPD6 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 LFPGS(1)PAIYK;LFPGS(1)PAIYK 119.27 5.9826000000000006e-05 19694100.0 11294.6 12378.5 11812.400000000001 11848.5 13852.5 12109.8 12653.8 12492.5 13412.8 12918.6 13324.4 True False 12441.21947735493 13421.679637349525 12614.060497731598 12580.354935104102 12879.548188530664 12011.181803791387 13135.347283425053 12243.327287323344 12849.106660268435 12102.917391297926 11685.5832703308 1.0646639700854863 1.1485673694548564 1.0794549322803733 1.076570560841844 1.1021741825443399 1.0278632675775172 1.1240643260636498 1.0477292407310665 1.0995691325816632 1.0357135892417728 1.0 13.512442125669562 -10.928462285068447 0.6621032108164849 0.9842513037524235 1.0879134001867325 0.35789290290470743 0.0336458363777691 0.7100576118864016 0.411167703320698 0.04452268379055743 0.005910660910935029 1.1790649109633302e-11 10.928462285068447 0.10366209643430901 LFPS(ph)PGLPT(ph)RTSPVR ddPTM_A549_MK2206_60min_R1 1 LFPSPGLPTRTSPVR 15 1 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17;M0QYT1;M0R2C2 A0A384DVU0 PNPLA6 Neuropathy target esterase 2 LFPS(0.998)PGLPT(0.858)RT(0.075)S(0.069)PVR 59.872 0.0031146999999999998 2028400.0 349.61 217.84 260.01 300.16 227.85 290.29 423.67 329.14 393.36 451.22 345.69 True False 408.6156208561452 228.92712553013024 296.8833277410685 373.69921347469455 194.33356683106993 321.0082951210931 500.64535492669233 375.7966029489753 304.2645880668428 349.28908861410014 259.84563244136115 1.572532187734026 0.8810120200184307 1.142537301673006 1.4381585326781527 0.7478808283411298 1.2353807608967005 1.9267029821625807 1.4462302075975073 1.170943629908829 1.344217662357375 1.0 8.021510999759398 -9.443333032023727 1.676646969449743 1.0483794636854016 1.2803917998112428 0.0 0.3188290918909333 0.5993323180522536 3.437423586186687 0.0707656298951622 0.05880744360535945 3.603022448411563e-10 9.443333032023727 0.23201233612584127 LFPS(ph)PGLPT(ph)RTSPVR ddPTM_A549_PD325901_60min_R1 1 LFPSPGLPTRTSPVR 15 1 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17;M0QYT1;M0R2C2 A0A384DVU0 PNPLA6 Neuropathy target esterase 2 LFPS(0.999)PGLPT(0.776)RT(0.118)S(0.107)PVR 46.621 0.016186000000000002 2919100.0 239.78 389.55 482.64 397.65 424.07 384.72 77.157 219.17 466.74 470.48 277.09 True False 264.1222890832935 422.3787456258437 515.3948527500912 422.2119373713251 394.2847861620789 381.5869678735096 80.09325185693042 214.7984824144611 447.1245409320715 440.7738125073807 243.0096866182311 1.0868796744642955 1.7381148525548362 2.1208819282985125 1.7374284261952953 1.6225064591005436 1.5702541457657357 0.3295887212214596 0.8839091371362086 1.839945341909376 1.813811698789759 1.0 7.924870012073088 -7.539383007817268 24.998511915348292 1.2726796483255434 1.685331239787277 0.19777250760874532 0.45595327899865934 382.74445983505984 579729.6793466284 0.07708897069467721 0.11435682724651956 2.8881316921899775e-08 7.539383007817268 0.4126515914617337 LFPS(ph)PGLPTR ddPTM_A549_MK2206_60min_R1 1 LFPSPGLPTR 10 0 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17;M0QYT1;M0R2C2 A0A384DVU0 PNPLA6 Neuropathy target esterase 1 LFPS(1)PGLPTR 78.655 0.0013157 2009700.0 433.71 499.99 226.93 300.0 538.95 281.42 483.03 536.98 456.29 456.1 430.76 True False 506.90964480855456 525.4373553700411 259.1120863208364 373.50001346751185 459.67116894274824 311.1996776085226 570.7902985584063 613.0985594322801 352.9410435454026 353.0666932247927 323.7904036288025 1.5655486979462254 1.6227700064033068 0.8002463427479644 1.1535240367892345 1.4196565549537448 0.9611145794341884 1.7628388369803811 1.8935044169349264 1.090029351055193 1.090417409743721 1.0 8.338916418027013 -8.969417495205926 24.99488090382699 1.039718441861254 1.3825404915533517 0.18773881492028655 0.3121120926068959 222.2106256568767 181612.66669415767 0.055862612352335486 0.05886899768709305 1.0729574628276283e-09 8.969417495205926 0.34282204969209773 LFPS(ph)PGLPTR ddPTM_A549_PD325901_60min_R1 1 LFPSPGLPTR 10 0 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17;M0QYT1;M0R2C2 A0A384DVU0 PNPLA6 Neuropathy target esterase 1 LFPS(0.998)PGLPT(0.002)R 70.942 0.0028685 3348700.0 384.45 587.84 457.73 485.69 592.0 405.13 551.82 557.62 682.54 776.09 876.57 True False 423.47908098286825 637.3793398246595 488.7943103540931 515.6899682179783 550.4199622891283 401.8307556004236 572.8198120674903 546.4978316555726 653.8552173967863 727.087544951652 768.7574470350531 0.5508617609053988 0.8291033046676903 0.6358238378558504 0.670809720552163 0.7159865109755883 0.5227016104366937 0.7451242446843852 0.7108846018510879 0.8505351329194635 0.945795774409583 1.0 9.586384670721772 -9.087925798390335 0.8133195276421862 0.9697719699999715 0.6630404326238097 0.6773479465235033 0.08214749294571831 0.19830677605093983 0.27848937163370535 0.021788767373434246 0.018651209681769566 8.167219008838658e-10 9.087925798390335 -0.30673153737616177 LFPSPGLPT(ph)RTSPVR ddPTM_A549_MK2206_60min_R1 3 LFPSPGLPTRTSPVR 15 1 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17;M0QYT1;M0R2C2 A0A384DVU0 PNPLA6 Neuropathy target esterase 1 LFPSPGLPT(0.38)RT(0.31)S(0.31)PVR;LFPSPGLPT(0.333)RT(0.333)S(0.333)PVR;LFPS(0.003)PGLPT(0.332)RT(0.332)S(0.332)PVR 83.41799999999999 9.048e-05 117053300.0 3806.35 4059.1000000000004 4161.95 4730.77 5717.1 4701.1 4310.65 4187.27 6311.4 5388.4 5042.6 True False 4448.768823677205 4265.690852182117 4752.177092773121 5889.808862372332 4876.122163396572 5198.567281662377 5093.839307042615 4780.828345476561 4881.877977234772 4171.156697593673 3790.3832513199904 1.1736989451206374 1.1253982959893574 1.2537458029127235 1.5538821464349872 1.2864456811058556 1.3715149463717133 1.3438850293749844 1.2613047358236533 1.2879642119394314 1.1004577693142452 1.0 11.888128013487162 -10.511454188532312 0.6778146408143477 0.9837550375168019 1.302690182502285 0.42106172942808495 0.10883027729641272 0.5486847037018491 0.42086775830896667 0.09726838369862395 0.022955282383843725 3.0799652138901014e-11 10.511454188532312 0.31893514498548303 LFPSPGLPTRT(ph)SPVR ddPTM_A549_PD325901_60min_R1 1 LFPSPGLPTRTSPVR 15 1 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17;M0QYT1;M0R2C2 A0A384DVU0 PNPLA6 Neuropathy target esterase 1 LFPSPGLPT(0.008)RT(0.627)S(0.365)PVR 100.58 2.9686000000000003e-06 116800000.0 2264.4 2464.4 2850.7 2098.2 2870.9 3269.9 3224.9 3173.3 2619.8 2860.3 2618.3 True False 2494.280221036824 2672.0836368125524 3044.1656446516768 2227.80104864206 2669.2578880673286 3243.2710185318883 3347.6253342329906 3110.006042094309 2509.6989165999066 2679.7001698581485 2296.265698771212 1.0862332796991108 1.163664831226826 1.3257027034287383 0.9701843518518831 1.1624342468276705 1.4124110377416002 1.4578562646406235 1.3543755166305664 1.0929479623995202 1.166981752717955 1.0 11.165073869237451 -8.93968721515536 5.2737611386934296 1.0398038959333389 1.2430163671076178 0.17691058417434424 0.1427355598254079 0.1944676884835761 10.25934571290599 0.026330277713066657 0.027582524803120637 1.148980835338045e-09 8.93968721515536 0.20321247117427887 LFPSPGLPTRTS(ph)PVR ddPTM_A549_PD325901_60min_R1 3 LFPSPGLPTRTSPVR 15 1 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17;M0QYT1;M0R2C2 A0A384DVU0 PNPLA6 Neuropathy target esterase 1 LFPSPGLPT(0.019)RT(0.126)S(0.856)PVR;LFPSPGLPT(0.058)RT(0.219)S(0.723)PVR;LFPSPGLPT(0.06)RT(0.199)S(0.742)PVR 119.32 5.680699999999999e-07 120348800.0 8238.5 8168.400000000001 8593.4 9335.8 10609.9 10156.300000000001 10207.8 10264.2 11076.5 9981.099999999999 10476.9 True False 9074.866455136846 8856.77973500229 9176.59980031211 9912.451162859852 9864.69722616794 10073.590460110536 10596.263414922487 10059.472478890873 10610.993224566328 9350.891642614813 9188.307718541075 0.9876537370232696 0.9639184936231734 0.9987257807871041 1.0788114053752824 1.0736141548962252 1.0963488347025045 1.1532334070114239 1.0948123187681096 1.1548365106617422 1.0176946537985074 1.0 13.165583458376098 -6.204692301843711 3.0847653801735837 1.0842569398250426 0.9761150516212203 0.503347504562793 0.04468303375244003 0.2138670323560502 4.0240854201335186 0.008404352973351594 0.024425033434646887 6.24176908940532e-07 6.204692301843711 -0.10814188820382231 LFQEKS(ph)PNRK ddPTM_A549_MK2206_60min_R1 1 LFQEKSPNRK 10 2 J3KTK0;J3KSW6;Q8IX18-4;Q8IX18-3;Q8IX18-2;Q8IX18 J3KTK0 DHX40 Probable ATP-dependent RNA helicase DHX40 1 LFQEKS(1)PNRK 49.423 0.0059978 5833700.0 2286.9 2323.1 2825.4 2751.7 3384.5 2489.2 2633.1 2655.9 3912.8 3646.2 2741.1 True False 2672.8728106630765 2441.3358672376303 3226.084205221396 3425.8666235285064 2886.644533420039 2752.6054918027667 3111.5001866015373 3032.381958352627 3026.557047457653 2822.520887604121 2060.4092194886025 1.2972533734470906 1.1848791221403943 1.5657492573354512 1.662711752172616 1.4010054440236437 1.3359508711992507 1.510136994714971 1.4717377158238838 1.468910650772981 1.3698836429710193 1.0 11.008715185320654 -10.665506364621741 0.8077849256808595 0.9833023880939866 1.4378526074246942 0.12578954083350502 0.16408582505904437 0.3797099247460174 0.4159441762705943 0.10836542965601477 0.025017326480339455 2.160198376655949e-11 10.665506364621741 0.4545502193307076 LFQEKS(ph)PNRK ddPTM_A549_PD325901_60min_R1 1 LFQEKSPNRK 10 2 J3KTK0;J3KSW6;Q8IX18-4;Q8IX18-3;Q8IX18-2;Q8IX18 J3KTK0 DHX40 Probable ATP-dependent RNA helicase DHX40 1 LFQEKS(1)PNRK 54.608000000000004 0.0038707999999999998 7765700.0 4383.4 4009.5 3643.9 3624.3 5327.5 3829.0 3674.1 4329.3 4420.2 4562.3 4110.5 True False 4828.399541111475 4347.394636341474 3891.196966550759 3848.1647796174893 4953.314778877248 3797.817893500905 3813.9198860446636 4242.948715229853 4234.4343656595565 4274.23559939301 3604.934558606371 1.339386183747558 1.2059566035568008 1.0794084894720126 1.0674714664182832 1.3740373641601267 1.0535053637614717 1.0579720169786062 1.1769835613521185 1.1746217016756453 1.1856624662405475 1.0 11.81575735471598 -14.999999999999998 0.18069745923526312 0.30174491911235757 1.2053877282583205 0.0 0.11446291413841721 50.33973681901568 0.5604174350469948 12.49233080688156 0.11349903045762896 1.000000000000004e-15 14.999999999999998 0.903642809145963 LFQKNS(ph)PMEDLGAK ddPTM_A549_PD325901_60min_R1 2 LFQKNSPMEDLGAK 14 1 Q66K14-2;Q66K14;H0YB08 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 LFQKNS(1)PMEDLGAK;LFQKNS(1)PMEDLGAK 47.916000000000004 0.0069869 9233600.0 7481.6 7317.3 7576.299999999999 8339.9 10476.2 9330.4 8271.400000000001 8525.5 9959.5 8104.700000000001 8686.0 True False 8241.126524337178 7933.954551066586 8090.473277992953 8855.036681712858 9740.387852927992 9254.416315884266 8586.172653283753 8355.452214374638 9540.936850094202 7592.9678588432425 7617.677065090612 1.0818424637746376 1.0415188886682232 1.0620656676388942 1.1624326689159181 1.2786559169809242 1.214860676923981 1.1271379161807014 1.0968504102996195 1.2524732629868596 0.9967563331923581 1.0 12.895135413930168 -6.24918763721494 21.19398925053932 1.1411042200941965 1.059779899287533 0.1449402473045145 0.0857820022101416 181.81015595174114 314499.34579549474 0.014396290803204738 0.03764395841803061 5.633941884070447e-07 6.24918763721494 -0.08132432080666363 LFQLGPPS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 LFQLGPPSPVK 11 0 O95997;Q9NZH5-2;Q9NZH5 O95997 PTTG1;PTTG2 Securin;Securin-2 1 LFQLGPPS(1)PVK;LFQLGPPS(1)PVK 159.66 2.4464e-13 305780000.0 48114.0 51499.0 47734.0 47418.0 74412.0 60238.0 52153.0 55911.0 75750.0 69153.0 72906.0 True False 56234.46692563876 54120.07912998614 54503.39897077864 59035.4121286749 63466.09337298041 66612.34517725176 61628.52502063344 63836.555470256295 58592.74594789338 53531.289271155714 54801.42809676266 1.026149662128253 0.987566948701164 0.9945616540237273 1.0772604689139909 1.1581102094806468 1.2155220674109917 1.12457881411076 1.1648702905614128 1.0691828294043069 0.9768228882034923 1.0 15.741925869108826 -6.262987809989694 24.34988896087205 1.0737392477588887 1.001240175454605 0.2188802230482808 0.06995181190863035 150.7755728337874 2371069.406311743 0.01152746659846586 0.028241466837032395 5.457731799304378e-07 6.262987809989694 -0.07249907230428376 LFQLGPPS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 LFQLGPPSPVK 11 0 O95997;Q9NZH5-2;Q9NZH5 O95997 PTTG1;PTTG2 Securin;Securin-2 1 LFQLGPPS(1)PVK 121.24 8.6979e-12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LFRPPS(ph)PAPAAPGAR ddPTM_A549_MK2206_60min_R1 3 LFRPPSPAPAAPGAR 15 1 Q86U90 Q86U90 YRDC YrdC domain-containing protein, mitochondrial 1 LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR 143.99 4.2323e-14 333361000.0 13225.7 15313.7 15669.7 14587.6 21365.0 15574.5 16059.1 15991.0 25968.9 22714.7 21205.9 True False 15457.87482267989 16093.101919898807 17891.899083513017 18161.56265486225 18222.23680204436 17222.583252483608 18976.830597642598 18257.773220383617 20086.98561381185 17583.433493955723 15939.88977693385 0.9697604587610469 1.009611869662152 1.1224606527332368 1.139378183225791 1.143184617776544 1.0804706615604023 1.1905245809857115 1.1454140195375697 1.2601709230686866 1.1031088508152798 1.0 13.960354032791214 -5.7039726669921205 3.277314925621644 1.1312664731650344 0.976651409460415 0.44994670148135163 0.061232841712282396 0.2444546880697625 5.141583879783387 0.012691363778203377 0.05834638440856579 1.9770940677283173e-06 5.7039726669921205 -0.15461506370461942 LFRPPS(ph)PAPAAPGAR ddPTM_A549_PD325901_60min_R1 4 LFRPPSPAPAAPGAR 15 1 Q86U90 Q86U90 YRDC YrdC domain-containing protein, mitochondrial 1 LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR 157.42 4.6789999999999996e-20 739113000.0 17168.4 16908.9 17755.2 17937.1 21163.9 20847.5 17384.5 19951.0 22375.399999999998 19324.1 19672.399999999998 True False 18911.32332929192 18333.872344789706 18960.174642691094 19045.03392889024 19677.42067549137 20677.724871966595 18046.076660663424 19553.061653743276 21435.039750549506 18103.973028128454 17252.81951361828 1.096129436372097 1.0626594876459532 1.0989609337607187 1.1038795087294166 1.1405336188649782 1.198512791236523 1.0459784063943287 1.1333255783676013 1.24240792837542 1.0493341690520976 1.0 14.07454453076885 -6.222371976531913 2.420430875477992 1.1208964938082462 1.080324129287732 0.03424348351908679 0.06571104535769745 1.0170256756224139 11.552132818180512 0.012883141511042943 0.03993779384988496 5.992775705720494e-07 6.222371976531913 -0.04057236452051427 LFS(ph)DEDDR ddPTM_A549_MK2206_60min_R1 2 LFSDEDDR 8 0 H0Y322;Q5TKA1;Q5TKA1-2;B1B047 H0Y322 LIN9 Protein lin-9 homolog 1 LFS(1)DEDDR;LFS(1)DEDDR 101.65 0.0022794 7805300.0 1821.5100000000002 1810.83 1480.1399999999999 1155.55 2467.2 1520.1 1546.31 1527.23 1969.99 1942.53 1779.6 True False 2128.9363563561583 1902.99351231971 1690.0461086983776 1438.6598018746106 2104.2781482800765 1680.9559730392848 1827.2545112391574 1743.719529445719 1523.7904104275963 1503.7111238543225 1337.6762055386225 1.5915184463484797 1.4226114693828014 1.263419429680198 1.0754918087933891 1.5730848314168657 1.25662396182224 1.3659916380910757 1.303543803968316 1.1391324777389114 1.12412190455974 1.0 10.38551322784917 -8.38263350213122 0.04789403199869161 3.988246568743733e-13 2.4535962483185667 0.42150806138096664 0.14067602118799816 22.08717145422422 0.8109168392152019 19.971895695760285 21.009452418737517 4.143491935097924e-09 8.38263350213122 2.453596248318168 LFS(ph)DEDDRQINTR ddPTM_A549_MK2206_60min_R1 2 LFSDEDDRQINTR 13 1 H0Y322;Q5TKA1;Q5TKA1-2;B1B047 H0Y322 LIN9 Protein lin-9 homolog 1 LFS(1)DEDDRQINTR;LFS(1)DEDDRQINTR 50.07899999999999 0.008093600000000001 34998000.0 687.33 1093.49 885.77 670.4 1045.76 518.17 366.81 706.16 947.65 882.49 793.05 True False 803.3345003948806 1149.1439703265798 1011.3855052236687 834.6480300954001 891.9300893098947 573.0024054665919 433.4546289344535 806.2603425243012 733.0087880860874 683.1348960840766 596.1137979334702 1.3476193692878375 1.9277258374328572 1.69663159740608 1.4001488188813098 1.4962413089613458 0.9612298984740868 0.7271340311817939 1.3525275632259137 1.2296457331254316 1.145980680957696 1.0 9.21944395677548 -6.930836076592482 1.959027769757165 1.0926496590345116 1.6501381166329174 0.5775119966867281 0.2116683964270727 0.1808905906898541 1.3982084231831642 0.0324076366323448 0.06922687047650122 1.1726378913790936e-07 6.930836076592482 0.5574884575984058 LFS(ph)DEDDRQINTR ddPTM_A549_PD325901_60min_R1 2 LFSDEDDRQINTR 13 1 H0Y322;Q5TKA1;Q5TKA1-2;B1B047 H0Y322 LIN9 Protein lin-9 homolog 1 LFS(1)DEDDRQINTR;LFS(1)DEDDRQINTR 118.47 3.8050999999999998e-06 14248200.0 768.0 1026.2 1039.1599999999999 1119.3600000000001 1296.49 1040.04 1122.45 2036.3 2539.0 4160.1 4122.5 True False 845.9667946282818 1112.6814754492127 1109.6836465767135 1188.500324948992 1205.4290150476897 1031.570259064163 1165.1654489782072 1995.684399053552 2432.294659610339 3897.4305760328916 3615.458634680639 0.23398602504077823 0.3077566604623864 0.3069274907289139 0.3287274022577705 0.33340971003922654 0.28532210247657386 0.32227320700106105 0.5519865114512187 0.6727485791924123 1.0779906423620746 1.0 11.819962954801104 -9.06351747306239 0.5498621615318368 0.9717943080963075 0.26921041993520645 0.9535125670029133 0.061528944565814335 0.09889510620359489 0.06901687819565203 0.02403947797813368 0.018629073114999943 8.639379009875696e-10 9.06351747306239 -0.7025838881611011 down LFS(ph)PAHK ddPTM_A549_MK2206_60min_R1 2 LFSPAHK 7 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 LFS(1)PAHK;LFS(1)PAHK 57.96 0.010423 23112000.0 2370.5 2784.5 2182.1 2253.3999999999996 3297.1 2805.2 2439.1 2394.7 3620.6 3454.0 3403.3 True False 2770.582446839312 2926.219156438889 2491.5545919917895 2805.483101158971 2812.1009576419583 3102.0444020589457 2882.252897778213 2734.1560584611752 2800.539880910134 2673.7390010928184 2558.166683698355 1.0830343716437845 1.1438735306365724 0.9739610041319653 1.0966772099084134 1.0992641627153432 1.2126044881384757 1.1266869028296955 1.0687951163949925 1.0947448806820432 1.0451777900677606 1.0 11.320894554319679 -10.432965374286324 0.6999378917440845 0.9972065385516389 1.1017282402247361 0.21179120100240145 0.05571437266610935 0.7420386107824195 0.6349315265619122 0.04281814653744742 0.011398113726042224 3.6900701782951925e-11 10.432965374286324 0.10452170167309727 LFS(ph)PAHK ddPTM_A549_PD325901_60min_R1 4 LFSPAHK 7 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 LFS(1)PAHK;LFS(1)PAHK;LFS(1)PAHK;LFS(1)PAHK 64.42 0.0079279 40511100.0 7496.599999999999 7200.4 6575.7 7943.1 8137.500000000001 7460.6 8065.3 7882.800000000001 7463.2 8315.8 8075.0 True False 8257.649313294765 7807.202977805992 7021.966544896359 8433.727246911034 7565.950072850984 7399.843347154042 8372.2294050015 7725.571370063033 7149.5476579771075 7790.738968816695 7081.826191642488 1.166033885869708 1.1024279284091365 0.9915474278630599 1.1908972373346258 1.0683614463427282 1.0449060944035675 1.1822133413669291 1.09090101352392 1.009562712286633 1.100103103068361 1.0 12.789905720944924 -8.745676748574496 4.778368682308572 1.0041560914364376 1.1036680719581007 0.13888350487440204 0.06338272990771972 0.13660519196392923 7.839992647893999 0.009226128451403715 0.010186657141302789 1.7960699693097358e-09 8.745676748574496 0.0995119805216631 LFS(ph)PSKEAELTFR ddPTM_A549_MK2206_60min_R1 1 LFSPSKEAELTFR 13 1 Q96RY5;H7C194 Q96RY5 CRAMP1L Protein cramped-like 1 LFS(0.5)PS(0.5)KEAELTFR 79.346 0.00021441 6800800.0 1089.9 1351.4 1513.6 1198.8 2056.6 1083.1 1497.7 1378.6 2193.2 2198.2 2231.6 True False 1273.8484745033402 1420.180487703903 1728.2512398326262 1492.5060538161765 1754.076864361545 1197.7129230964078 1769.8127034571874 1574.0207717854323 1696.4437018207223 1701.6250932837966 1677.4321309732468 0.7594038834609975 0.8466396115113842 1.030295776455584 0.889756447523289 1.0456917045840948 0.7140157273614965 1.0550726141333309 0.9383513900333987 1.011333734758285 1.0144226176808198 1.0 10.71203868072146 -3.0753949591280882 0.32067567187762547 1.0018092013974902 1.5689134744122922e-24 0.2724154627708738 0.09678104650115879 22.5746559001866 0.52927919454107 0.027210267956045236 11.876887274680882 0.0008406303020207604 3.0753949591280882 -1.0018092013974902 LFS(ph)PSKEAELTFR ddPTM_A549_PD325901_60min_R1 1 LFSPSKEAELTFR 13 1 Q96RY5;H7C194 Q96RY5 CRAMP1L Protein cramped-like 1 LFS(0.672)PS(0.326)KEAELT(0.002)FR 66.82600000000001 0.0013117 10421000.0 1539.2 1789.4 1640.1 1698.8 2280.8 1981.8 1991.0 1922.2 2207.3 1721.2 2356.8 True False 1695.458450900849 1940.1990178998471 1751.4070487224956 1803.7310177452734 2120.604476332845 1965.660877863697 2066.7685945170037 1883.860213063271 2114.534857092517 1612.5231382581712 2066.928540986132 0.8202791810557445 0.9386870321961774 0.8473476532898903 0.8726624950878626 1.0259689361689808 0.9510057260740519 0.9999226163527396 0.9114297740378006 1.0230323957323035 0.7801542754297816 1.0 11.013272796624761 -6.480335538285633 0.5105985927432504 1.008339343050884 0.8273199462255932 0.0 0.08335741803431239 0.8478236315409544 0.2959703306727846 0.009898776827472906 0.07376938024728297 3.3087538657574974e-07 6.480335538285633 -0.18101939682529078 LFS(ph)QGQDVSNK ddPTM_A549_PD325901_60min_R1 2 LFSQGQDVSNK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y8L4;H0Y8U8;H0Y948 A8MQ02 MLLT4 Afadin 1 LFS(0.94)QGQDVS(0.06)NK;LFS(0.986)QGQDVS(0.014)NK 100.4 0.00026799 58634000.0 25095.0 24734.0 26148.0 26818.0 33114.0 28973.0 29448.0 29333.0 32031.0 32985.0 35658.0 True False 27642.625926037414 26818.420983980537 27922.560520697407 28474.486951902938 30788.186877098316 28737.053493967534 30568.659754563916 28747.930303706657 30684.84846080297 30902.321470744686 31272.29205468579 0.8839334794424026 0.857577722064095 0.8928850009417054 0.9105340568612517 0.984519677139721 0.9189301968565371 0.9774998168061544 0.9192780066595443 0.9812152050493913 0.9881693806359273 1.0 14.932597342808073 -3.769045463926234 0.18859060742049186 1.0105309593329008 0.6085217205768156 0.6977225863784396 0.02613003108154202 9.019593492507068 0.17396653834356884 0.025611602114878913 0.9321942240072497 0.00017019803280089954 3.769045463926234 -0.4020092387560852 LFS(ph)RDAPGR ddPTM_A549_MK2206_60min_R1 2 LFSRDAPGR 9 1 J3KS94;J3QQK6;P02686-2;P02686 J3KS94 MBP Myelin basic protein 1 LFS(1)RDAPGR;LFS(1)RDAPGR 101.39 0.00020508 40715000.0 9134.7 9532.599999999999 7512.8 7509.4 6058.5 4885.4 4044.1000000000004 4201.5 5363.299999999999 8108.1 8134.799999999999 True False 10676.414038027024 10017.768622973375 8578.228009126957 9349.203337109771 5167.302675646417 5402.36978533394 4778.860622321707 4797.075491554113 4148.521113430184 6276.474578679986 6114.7046509415495 1.7460228494246335 1.638307848839572 1.4028850940177577 1.528970550633246 0.8450616948196753 0.8835046161227226 0.7815358050999 0.7845146683929294 0.678449957969988 1.0264558857660486 1.0 12.578067100845267 -6.749876892093239 5.312931294023558 0.8362263015271024 1.5775362082903024 0.8929154588244713 0.12021755110068129 0.04555704804392119 3.736301934678601 0.020081812800258177 0.04092394610621948 1.7787835640084844e-07 6.749876892093239 0.7413099067632 LFS(ph)RDAPGR ddPTM_A549_PD325901_60min_R1 6 LFSRDAPGR 9 1 J3KS94;J3QQK6;P02686-2;P02686 J3KS94 MBP Myelin basic protein 1 LFS(1)RDAPGR;LFS(1)RDAPGR;LFS(1)RDAPGR;LFS(1)RDAPGR;LFS(1)RDAPGR;LFS(1)RDAPGR 94.616 0.00026296 98109500.0 12106.800000000003 13748.4 12718.57 14174.800000000001 15287.699999999999 13276.8 13919.7 13678.199999999999 14080.7 12345.300000000001 12433.36 True False 13335.873423444895 14907.025918013993 13581.728643174474 15050.345202693488 14213.944691701869 13168.678142709005 14449.42180065211 13405.377570659686 13488.937145953256 11565.815651137922 10904.135541562859 1.2230106066283821 1.3670983693474348 1.2455575768849847 1.3802419408055493 1.3035370513804732 1.2076774075775636 1.325132262486634 1.2293847155111877 1.2370478241524063 1.060681574165413 1.0 13.412587780033862 -10.56039693783833 0.38607284085698834 0.919236551668463 1.3075904460327248 0.7584994225342512 0.055045585035004015 0.6285763174184321 0.1293711621775542 0.09950973582253672 0.016263839251737675 2.7517125347567652e-11 10.56039693783833 0.3883538943642618 LFS(ph)RDAPGREDNTFK ddPTM_A549_MK2206_60min_R1 2 LFSRDAPGREDNTFK 15 2 J3KS94;J3QQK6;P02686-2;P02686 J3KS94 MBP Myelin basic protein 1 LFS(1)RDAPGREDNTFK;LFS(1)RDAPGREDNTFK 153.25 2.3386999999999995e-15 56955000.0 8751.6 10325.9 9141.2 7692.9 8340.7 7208.8 6272.8 6402.4 9490.0 12854.3 11644.0 True False 10228.656123922767 10851.444204515117 10437.55961519424 9577.660845347398 7113.794078858477 7971.630431185835 7412.486563561624 7309.959806527676 7340.530152415948 9950.504702300925 8752.473441948589 1.1686589158784733 1.2398145822992899 1.1925268536285323 1.0942804806974764 0.8127752830147078 0.9107860176963973 0.846901920094414 0.835187887745277 0.8386806542290638 1.136879165449443 1.0 13.09547506368351 -6.572570862108771 4.161677820892082 0.9022833882492857 1.1980109839779027 0.6741797382966356 0.08938754925530534 0.07520055451729163 2.7518958414576606 0.010682053830459027 0.023464017627532474 2.6756489825439123e-07 6.572570862108771 0.29572759572861707 LFS(ph)RDAPGREDNTFK ddPTM_A549_PD325901_60min_R1 4 LFSRDAPGREDNTFK 15 2 J3KS94;J3QQK6;P02686-2;P02686 J3KS94 MBP Myelin basic protein 1 LFS(1)RDAPGREDNTFK;LFS(1)RDAPGREDNTFK;LFS(1)RDAPGREDNTFK;LFS(1)RDAPGREDNTFK 132.14 4.5811000000000003e-10 97005000.0 14205.1 14894.9 13736.2 16834.6 19638.2 17236.7 17069.1 17823.4 15992.900000000001 16517.5 15989.699999999999 True False 15647.191294758086 16150.1454966561 14668.421134480795 17874.43500784939 18258.88058011211 17096.330030009678 17718.673941069916 17467.8983048132 15320.774029807877 15474.582231105815 14023.068267059547 1.1158179505917143 1.151684152789379 1.046020803374194 1.2746450824771907 1.3020603075150512 1.2191575840908713 1.2635375941719842 1.2456545152707859 1.0925407862269818 1.1035090136055246 1.0 13.775514427140877 -9.084881651535673 1.9158170025500998 1.0319096072121758 1.2031997355121729 0.3700012818579326 0.07679208479908238 0.19598551995133093 1.4731022265545064 0.016199594279770912 0.015607812886100494 8.224667476945465e-10 9.084881651535673 0.171290128299997 LFSGDVVLTAR ddPTM_A549_PD325901_60min_R1 1 LFSGDVVLTAR 11 0 P16152;E9PQ63;A8MTM1;P16152-2 P16152 CBR1 Carbonyl reductase [NADPH] 1 0 74.376 0.0014412000000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LFSPS(ph)KEAELTFR ddPTM_A549_MK2206_60min_R1 1 LFSPSKEAELTFR 13 1 Q96RY5;H7C194 Q96RY5 CRAMP1L Protein cramped-like 1 LFS(0.409)PS(0.591)KEAELTFR 62.861000000000004 0.0019010000000000001 6855700.0 839.53 1117.4 1051.2 905.83 1612.8 1286.1 1252.0 1291.0 1431.9 1775.3 1292.9 True False 981.2221394621419 1174.2708871987124 1200.275966775937 1127.7583906642535 1375.5592564632411 1422.1942483559135 1479.4721938495022 1474.0032035216843 1107.5769362744354 1374.2584970006026 971.8372477752773 1.0096568553102367 1.2082999389937408 1.2350586165776212 1.1604395625357125 1.4154214191853227 1.463407840779503 1.5223456368196415 1.5167181612929137 1.1396732722581815 1.414082965173999 1.0 9.924570917713424 -8.96619552600354 5.621612277574046 1.059829135921259 1.3211291289323654 0.0 0.18605239598562387 0.15661840991346868 11.728945570053522 0.029923484659455137 0.031056524471062923 1.0809471828127747e-09 8.96619552600354 0.2612999930111064 LFSPS(ph)KEAELTFR ddPTM_A549_PD325901_60min_R1 1 LFSPSKEAELTFR 13 1 Q96RY5;H7C194 Q96RY5 CRAMP1L Protein cramped-like 1 LFS(0.411)PS(0.589)KEAELT(0.001)FR 66.02199999999999 0.0014313 9206800.0 1706.5 1717.9 1518.1 1775.9 2336.4 1818.1 1896.1 1817.3 2240.9 1907.0 2129.6 True False 1879.7426237410966 1862.6734619705755 1621.127395076898 1885.5933096384674 2172.2993241424333 1803.293996389134 1968.2571230857322 1781.0525258557288 2146.7227659396635 1786.591694549343 1867.6727006466679 1.006462547260154 0.9973232790336544 0.8679933023144765 1.0095951549677813 1.163104929140042 0.9655299859363778 1.0538554867800112 0.9536213305677449 1.1494105820556122 0.9565871439523363 1.0 10.867025937500804 -6.522334498295772 24.999951573525248 1.060063567060089 0.9575207533753137 0.10946575704682016 0.07699776046112773 20.18289084369751 927072.7125659345 0.011030510586002101 0.023172118211100396 3.0037618816363833e-07 6.522334498295772 -0.10254281368477536 LFTPSRS(ph)QEEEEEKAAVGLSNR ddPTM_A549_MK2206_60min_R1 2 LFTPSRSQEEEEEKAAVGLSNR 22 2 A0A1B0GTL5 A0A1B0GTL5 1 LFT(0.014)PS(0.113)RS(0.874)QEEEEEKAAVGLSNR;LFT(0.014)PS(0.045)RS(0.941)QEEEEEKAAVGLSNR 60.398 0.00031025 11397900.0 1548.83 1617.0 1402.87 1397.01 1803.75 1786.25 1643.52 1314.98 2417.9 2143.8500000000004 2414.2 True False 1810.234638742094 1699.298393234579 1601.8180607980958 1739.2775127141617 1538.4207644131757 1975.2697893832117 1942.1263099325363 1501.3824419573548 1870.2495105928901 1659.5527960315108 1814.6875114696227 0.9975462041263938 0.9364137806064494 0.8826963599374006 0.9584446367328608 0.8477607051846008 1.0884903196272848 1.0702263048913074 0.8273504019110496 1.0306179431842073 0.9145116090469614 1.0 10.825505422708519 -7.2601982612096485 24.999954251121576 1.0084770985064313 0.9247855491696932 0.11623808197149155 0.07785776578756429 125.44324597792875 2526802.37282307 0.01044429752539822 0.017471076593661348 5.492900583912518e-08 7.2601982612096485 -0.08369154933673806 LFTPSRS(ph)QEEEEEKAAVGLSNR ddPTM_A549_PD325901_60min_R1 2 LFTPSRSQEEEEEKAAVGLSNR 22 2 A0A1B0GTL5 A0A1B0GTL5 1 LFTPS(0.039)RS(0.961)QEEEEEKAAVGLSNR;LFT(0.004)PS(0.026)RS(0.97)QEEEEEKAAVGLSNR 155.45 3.1742e-33 21909600.0 3009.0 2953.9 3219.3 3323.1 3360.7 3531.7 3542.2 3253.7 3554.6 3884.0 3987.8 True False 3314.471464891278 3202.8355197129526 3437.7810572235403 3528.3603396923227 3124.656025785599 3502.9390061314034 3677.000359366216 3188.802401021729 3405.212523454475 3638.7635771524115 3497.325880746985 0.9477159343765096 0.9157955617875869 0.9829741849762291 1.0088737681312983 0.8934414842457322 1.001604976366463 1.051374817430755 0.9117830335961259 0.9736617746148277 1.0404416692147707 1.0 11.772036517252705 -2.0000000000000004 0.17103957098625727 0.9959426943705748 0.7656445415558599 0.15851633663348785 0.0459149480102263 89.15827163828284 0.908334474023798 0.0517109849527912 5.317570138986407 0.00999999999999999 2.0000000000000004 -0.23029815281471488 LFTS(ph)TGLK ddPTM_A549_PD325901_60min_R1 1 LFTSTGLK 8 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 LFT(0.023)S(0.727)T(0.25)GLK 63.076 0.010062 3043800.0 2024.8 2188.5 2388.9 2023.1 2568.8 2215.4 2542.4 2414.7 2236.1 2336.3 2428.4 True False 2230.356205421021 2372.9325755414184 2551.025119622686 2148.0622922065336 2388.3763498789067 2197.3585169135304 2639.1524232546612 2366.536914204497 2142.124493247216 2188.7856192845493 2129.7221948959286 1.0472521771930023 1.1141981715870575 1.1978206010795436 1.0086114974781963 1.1214497156497059 1.0317582838642985 1.2392003189803948 1.1111951220098641 1.0058234348033799 1.027732924289455 1.0 11.056449539439667 -8.765047429042708 8.207540053783177 1.0026730073488759 1.1109852276113272 0.3113838506816914 0.06435622369031022 0.08833931873098459 48.94615514856914 0.010382846296736907 0.011349233020382366 1.717720785645948e-09 8.765047429042708 0.10831222026245135 LFTS(ph)TGLKK ddPTM_A549_PD325901_60min_R1 1 LFTSTGLKK 9 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 LFT(0.063)S(0.544)T(0.393)GLKK 42.001000000000005 0.034543 5991600.0 4009.3 3255.0 3688.3 3679.3 4361.6 4660.9 3836.4 4206.5 3799.9 3430.9 4233.5 True False 4416.321184509339 3529.3102734234944 3938.610217549651 3906.5620047034267 4055.256262703146 4622.943175716472 3982.3963013586344 4122.598057564589 3640.203417508202 3214.2723884789416 3712.8063383676126 1.189483313167106 0.9505775286343658 1.060817575333411 1.0521857723451855 1.0922347930719425 1.2451344762972512 1.0726108335371864 1.1103725004351148 0.9804452712469427 0.8657258406567312 1.0 11.858294350201305 -8.7637946455355 24.98655852529009 0.9907658167869633 1.0931270491178025 0.3704667839807184 0.08089114224785876 55.51080047569363 588901.5907617891 0.012149604352433712 0.01323661362401516 1.7226829463968966e-09 8.7637946455355 0.10236123233083916 LFTSDS(ph)STTKENSK ddPTM_A549_MK2206_60min_R1 2 LFTSDSSTTKENSK 14 1 G5EA36;P30260;P30260-2 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LFT(0.017)S(0.078)DS(0.439)S(0.439)T(0.023)T(0.004)KENSK;LFT(0.045)S(0.039)DS(0.487)S(0.423)T(0.005)T(0.001)KENSK 93.765 1.5708e-05 15174400.0 6747.5 7651.799999999999 8435.6 7471.9 10195.3 8269.2 8121.4 7692.0 11690.6 11414.400000000001 10193.8 True False 7886.313039463518 8041.243936519694 9631.894925166558 9302.515835426335 8695.584875632241 9144.241255349283 9596.953254895649 8782.364555762044 9042.697766052039 8835.879112354907 7662.398125432459 1.0292225632713938 1.0494421987588713 1.2570339947747027 1.2140475714189425 1.134838562717135 1.1933915604043597 1.252473846672383 1.1461639570270143 1.1801393790852752 1.1531480050648266 1.0 12.903580272400525 -10.666453948705565 0.8429821045518043 0.9956941657083561 1.1657940447607509 0.025309562754840753 0.08214749963456848 0.5109210005139796 0.6206014211562184 0.05557318617861938 0.013367243460402248 2.1554901932141035e-11 10.666453948705565 0.17009987905239476 LFTSDS(ph)STTKENSK ddPTM_A549_PD325901_60min_R1 1 LFTSDSSTTKENSK 14 1 G5EA36;P30260;P30260-2 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LFTS(0.001)DS(0.493)S(0.493)T(0.007)T(0.007)KENSK 103.61 6.9906e-06 14268000.0 3448.2 3531.7 3512.9 3634.6 4611.3 4065.8 4141.4 4122.5 4423.8 3765.8 4527.1 True False 3798.2587255693265 3829.328753502228 3751.3065187837633 3859.1009872244904 4287.418196121383 4032.6894728116927 4299.003243261034 4040.273503461314 4237.883070178896 3528.0267453245515 3970.295399651357 0.9566690493364455 0.9644946705573828 0.9448431769367026 0.9719934157955524 1.0798738543479343 1.0157152218864658 1.0827917851247395 1.017625414929101 1.0673974209956862 0.8886056049215778 1.0 11.955030636049866 -6.620413407181125 6.696185320350887 1.0367887228567692 0.9566397686792134 0.22401033858707475 0.051569813163052536 0.11012025905523443 6.4768494660995835 0.004287923728399996 0.008977014682625932 2.3965505439344423e-07 6.620413407181125 -0.08014895417755574 LFTSDSS(ph)TTKENSK ddPTM_A549_PD325901_60min_R1 1 LFTSDSSTTKENSK 14 1 G5EA36;P30260;P30260-2 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LFTS(0.002)DS(0.112)S(0.782)T(0.091)T(0.013)KENSK 137.14 9.1379e-10 15152000.0 5941.0 6491.3 6467.6 6153.5 8104.4 7433.9 7050.7 8361.3 7900.5 6560.2 7442.7 True False 6544.125946466953 7038.344632219328 6906.530228838252 6533.587719387525 7535.174902662181 7373.360783101687 7319.018246791084 8194.527312187047 7568.469459728826 6145.987852429262 6527.295083162546 1.0025785356859112 1.078294231001607 1.0580998929639263 1.0009640496016814 1.1544100284510665 1.129619649358523 1.12129421966395 1.2554246755788936 1.159510848414382 0.941582657766326 1.0 12.672269546178272 -6.754450648603531 24.998942961547865 1.1030726836658353 1.0397288820081485 0.1594571029881232 0.08061093122048645 297.4146763663494 1063852.7776022097 0.012085296721190136 0.02474583179428043 1.760148668321558e-07 6.754450648603531 -0.06334380165768683 LFTST(ph)GLKK ddPTM_A549_PD325901_60min_R1 1 LFTSTGLKK 9 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 LFT(0.018)S(0.112)T(0.87)GLKK 57.348 0.0084425 6021300.0 3247.3 3247.2 3649.6 3276.9 4958.0 3650.1 3456.4 4293.7 3714.5 3604.0 3947.9 True False 3576.9635054640894 3520.8529400493903 3897.2838028276424 3479.306670620132 4609.767184171454 3620.3747957867986 3587.9351934146525 4208.058785157514 3558.392482521704 3376.4428249375105 3462.3333278000478 1.0331077821836632 1.0169017846373924 1.1256235127725154 1.004902284446099 1.3314047920107337 1.045645942497157 1.03627665326331 1.215382340969261 1.0277440516631864 0.9751928844710305 1.0 11.757528908042287 -8.972815551170665 24.803565687906637 1.012239936920158 1.1009880336801883 0.18401683677341096 0.09364738208377928 215.8960288423521 196989.09498966852 0.015538478207948363 0.016235803594178897 1.0645950654617958e-09 8.972815551170665 0.08874809676003026 LFVGGIKEDTEEHHLR ddPTM_A549_MK2206_60min_R1 4 LFVGGIKEDTEEHHLR 16 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;; 161.76 3.7337e-20 26108100.0 3056.21 3695.14 3208.9300000000003 2863.14 4721.4 3687.1400000000003 3888.74 3773.1 4990.0 4707.1 4385.09 False True 3572.023530839388 3883.2068427809636 3664.0045263187853 3564.6094285312383 4026.8883144007627 4077.310707474554 4595.273721334115 4307.948479634131 3859.772967392581 3643.76284077707 3296.151130672823 1.083695312875491 1.17810339660861 1.1116008887525963 1.0814459917690777 1.2216940773522054 1.2369914320774114 1.3941331993463875 1.3069632759086434 1.1709939303070456 1.1054598822455362 1.0 11.686566677205548 -10.1752685063849 0.9726436532442743 1.0156716110836863 1.199674673582997 0.24546164796962555 0.09368276882764215 0.4102039947069824 0.770906896530115 0.04158209745095545 0.018898238483612273 6.67930835769544e-11 10.1752685063849 0.18400306249931075 LFVGGIKEDTEEHHLR ddPTM_A549_PD325901_60min_R1 3 LFVGGIKEDTEEHHLR 16 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;; 150.12 2.3038e-14 32744000.0 2749.6000000000004 2569.7 2799.26 3268.1000000000004 3238.93 2963.8 2675.3599999999997 3001.5299999999997 4368.2 2881.95 2881.95 False True 3028.7373678514623 2786.257637362934 2989.2346169178304 3469.9631146063844 3011.438730501903 2939.663795444757 2777.1722888131667 2941.6621294952656 4184.619744824686 2699.983185163335 2527.488420186261 1.1983189887881909 1.1023819595413233 1.182689737782277 1.3728898169791293 1.191474788351346 1.1630770578280716 1.0987873442397436 1.1638676980678244 1.6556434883750344 1.0682474996124263 1.0 11.30348876702653 LFVGGLK ddPTM_A549_MK2206_60min_R1 3 LFVGGLK 7 0 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 0 ;; 123.34 0.01736 6282600.0 3411.6400000000003 3830.2 4039.5 3258.26 5315.4 4981.9 4444.3 5187.6 6037.400000000001 5691.0 5421.4 False True 3987.4414254101966 4025.1408198930617 4612.361841506275 4056.53384626885 4533.5117012678 5509.081351282422 5251.771782048996 5922.958186358704 4669.938539746685 4405.399147428846 4075.1167569718414 0.9784851976543625 0.9877363177402759 1.1318355071950508 0.9954399071704635 1.1124863339220212 1.3518830698181363 1.2887414263809975 1.4534450273665203 1.1459643534770392 1.0810485711585924 1.0 11.992625679537378 -5.753171291271436 6.228665133217363 1.1306458529213512 0.9812297136643778 0.1650411244834704 0.14030818878185358 0.2535501009439621 38.33332022407041 0.02254490928083166 0.08205377630206742 1.7653414102368579e-06 5.753171291271436 -0.1494161392569734 LFVGGLK ddPTM_A549_PD325901_60min_R1 5 LFVGGLK 7 0 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 0 ;;;; 126.05 0.011313 10098680.0 6797.200000000001 6595.400000000001 6685.900000000001 6037.1 7305.299999999999 6605.5 6105.2 6314.599999999999 7008.299999999999 6632.6 6863.0 False True 7487.246740165831 7151.217504558311 7139.645379582787 6409.99795575111 6792.2009299168385 6551.706998046545 6337.536726893627 6188.650349292132 6713.765523019742 6213.816504073402 6018.894508141477 1.2439571303398296 1.1881280681834834 1.1862054352215883 1.0649792826706974 1.1284798098270947 1.0885233142372504 1.0529403228983558 1.0282038239615323 1.1154482794038583 1.032385016163394 1.0 12.55528281581986 -2.0000000000000027 0.2360320383237755 1.0339728961534569 2.2563269372162225 0.7942931577321114 0.03355060381090736 19.09966856571531 0.22777766876598735 0.022662154852097077 9.236080309635142 0.00999999999999994 2.0000000000000027 1.2223540410627656 LFVGS(ph)IPK ddPTM_A549_MK2206_60min_R1 2 LFVGSIPK 8 0 O43390-4;O43390;O43390-2;B4DT28;O43390-3;O60506-2;O60506;B7Z645;O60506-4;O60506-3;O60506-5 O43390-4;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 1 LFVGS(1)IPK;LFVGS(1)IPK 85.73100000000001 0.0029234 3064100.0 2228.2 3117.4 2425.06 2097.95 4356.700000000001 3091.8 2719.9 2884.9 3808.5 3716.3 3806.5 True False 2604.265685740288 3276.0623445080264 2768.9699733539314 2611.947844180555 3715.8352012855917 3418.9722238292597 3214.07062304414 3293.843409635713 2945.880830924777 2876.785248917558 2861.240995944464 0.9101874639121927 1.1449795208273374 0.9677513978300611 0.9128723682775207 1.2986795612646518 1.1949263374442511 1.1233134949484431 1.1511939799214472 1.0295815120432994 1.0054326961605564 1.0 11.482425302424977 -4.234015335335629 15.437952585295317 1.0505572485313917 1.0694217962845565 0.0 0.11958023485001286 0.0 0.0 0.015753149548058603 0.0 5.8342450265686814e-05 4.234015335335629 0.018864547753164818 LFVGS(ph)IPK ddPTM_A549_PD325901_60min_R1 2 LFVGSIPK 8 0 O43390-4;O43390;O43390-2;B4DT28;O43390-3;O60506-2;O60506;B7Z645;O60506-4;O60506-3;O60506-5 O43390-4;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 1 LFVGS(1)IPK;LFVGS(1)IPK 90.906 0.0026236000000000002 7183500.0 5299.1 5310.0 5093.7 4636.2 5819.9 5749.0 5168.0 4798.9 6415.1 5950.0 6218.2 True False 5837.060731008762 5757.492335446622 5439.3891129063895 4922.567544425851 5411.130301565032 5702.182050074876 5364.671068038109 4703.182174835779 6145.495656111178 5574.315984566647 5453.4008204175025 1.0703524137002434 1.055761812682208 0.9974306477787854 0.9026601393383347 0.9922487782863475 1.045619465329953 0.9837294643652105 0.8624310461881127 1.1269106853658135 1.0221724329699806 1.0 12.412940480899985 -8.808210697428928 24.9999928754879 1.0599299844821144 0.9902706720888955 0.14077541507466285 0.06563397522418891 165.30179539277512 88355.58639315657 0.012784411623262095 0.013610064393404321 1.5552109398935597e-09 8.808210697428928 -0.06965931239321888 LFVGSIPK ddPTM_A549_MK2206_60min_R1 2 LFVGSIPK 8 0 O43390-4;O43390;O43390-2;B4DT28;O43390-3;O60506-2;O60506;B7Z645;O60506-4;O60506-3;O60506-5 O43390-4;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 ; 113.89 0.0037061 3018800.0 2246.47 2765.3 2207.7 2190.4 3116.9 2512.7 2288.48 2326.1000000000004 3423.1 3653.8999999999996 3902.1000000000004 False True 2625.6192150816746 2906.04195844872 2520.785056936105 2727.0480983307916 2658.4081389324624 2778.59224620473 2704.26719343507 2655.8317983824872 2647.7733155674423 2828.481452256237 2933.100877518687 0.895168398470791 0.9907746374230204 0.8594266485197097 0.9297491672491641 0.9063473265813462 0.9473224284584899 0.9219823341782901 0.9054689590592053 0.902721531285135 0.9643314602425285 1.0 11.518210974915917 -10.778801589099775 0.9404892852575698 1.001864393868142 0.9180141398070362 0.347761749442394 0.03287913661017145 0.3822624558494699 0.5787326481685696 0.0223381305477409 0.005162216803486187 1.6641727673349603e-11 10.778801589099775 -0.0838502540611058 LFVGSIPK ddPTM_A549_PD325901_60min_R1 2 LFVGSIPK 8 0 O43390-4;O43390;O43390-2;B4DT28;O43390-3;O60506-2;O60506;B7Z645;O60506-4;O60506-3;O60506-5 O43390-4;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 ; 125.25 0.0030493 4831100.0 3225.4 2991.8 3087.0 3107.6000000000004 3936.0 3646.8 3260.5 3025.8999999999996 3531.0 3537.1 3478.2 False True 3552.8402335860183 3243.929485723014 3296.5023836390124 3299.549394128333 3659.5489384628545 3617.1016698926855 3384.580111714062 2965.5460507273715 3382.6043493832644 3313.7669023547364 3050.403450126426 1.1647115837869801 1.0634427670833402 1.0806775030045244 1.081676390705492 1.19969341704986 1.1857781205114926 1.10955162720321 0.9721815816214286 1.1089039219527077 1.08633725227966 1.0 11.57478435258458 -11.508080603796406 0.3013066853239322 0.9160459800762157 1.1205931603973507 0.1109567132270205 0.06358451516687938 5.789272309885624 0.4514707832693158 0.4233160684202544 0.027649354086558737 3.1039834443388476e-12 11.508080603796406 0.20454718032113495 LFVT(ph)PPEGSSR ddPTM_A549_MK2206_60min_R1 4 LFVTPPEGSSR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LFVT(1)PPEGSSR;LFVT(1)PPEGSSR;LFVT(0.996)PPEGS(0.002)S(0.002)R;LFVT(0.89)PPEGS(0.092)S(0.017)R 175.74 2.3875e-15 88082800.0 14818.9 15710.299999999997 14780.4 13967.599999999999 21033.800000000003 15192.099999999999 15858.199999999999 14315.800000000001 22886.3 21420.600000000002 21475.9 True False 17319.96803267964 16509.887165883232 16876.48297120913 17389.662627029393 17939.755883306385 16799.71793830018 18739.429668134337 16345.108490298791 17702.58959191118 16581.671582747193 16142.841325312924 1.0729194250036338 1.0227373752348516 1.0454468721529098 1.0772367934857527 1.1113134002733331 1.0406915114724713 1.160850762916799 1.0125298366569893 1.0966216687115966 1.0271842018756734 1.0 13.978606911397312 -10.910837433114123 1.0721906006289201 0.9985040803621639 1.0724890857206464 0.2200388384437345 0.04082649030633304 0.5150755648605023 1.015600854729776 0.029586424505811254 0.0064566144076313925 1.2278987772334452e-11 10.910837433114123 0.07398500535848251 LFVT(ph)PPEGSSR ddPTM_A549_PD325901_60min_R1 2 LFVTPPEGSSR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LFVT(1)PPEGSSR;LFVT(1)PPEGSSR 196.67 7.822600000000001e-24 144605000.0 20801.3 20748.0 20824.0 21172.0 25088.0 22330.0 21087.0 23064.0 22714.0 23160.0 23969.0 True False 22913.032662892296 22496.506775112328 22237.241864884607 22479.746354899296 23325.905428901435 22148.151883487913 21889.477324249157 22603.970426642012 21759.409570062726 21697.67364748968 21020.964952009756 1.0900086040389714 1.070193819668659 1.0578601846133884 1.0693965004089916 1.109649603724367 1.0536220356226031 1.0413164844821439 1.075306032727147 1.0351289591005368 1.0321920852360884 1.0 14.359541276229479 -9.207724435535146 0.4576154514475474 0.9989918975243053 1.0781807053895665 0.558505036033067 0.01913210922032184 0.33459442520165195 0.16978244582085608 0.009776345744710428 0.006348872467556976 6.198342417439377e-10 9.207724435535146 0.07918880786526117 LGADEDS(ph)FVILEPETNR ddPTM_A549_PD325901_60min_R1 2 LGADEDSFVILEPETNR 17 0 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 LGADEDS(1)FVILEPETNR;LGADEDS(1)FVILEPETNR 203.9 1.6048e-48 11061600.0 2454.6 2218.98 2627.6000000000004 2147.51 2858.7 2653.3 1986.14 1703.39 2662.8 2586.0 2559.3 True False 2703.7891850189844 2405.981232110988 2805.924737042394 2280.156815350924 2657.9147739796144 2631.6924044988127 2061.7236445575113 1669.4145501663952 2550.8917761364364 2422.7195186704803 2244.522324739395 1.2046167486139454 1.0719346408774701 1.2501211086720565 1.0158762023521712 1.184178363780907 1.1724955352379356 0.9185578694553158 0.7437727536794387 1.1364965044099586 1.0793920345398103 1.0 11.1321927304948 -7.732015466744595 24.999755045627474 1.0269931885301833 1.146353584363503 0.3221811035475153 0.11531626865612601 284.53296044317455 241750.1623925236 0.019057410533179824 0.02826429135277769 1.853465613850029e-08 7.732015466744595 0.11936039583331981 LGADES(ph)EEEGR ddPTM_A549_MK2206_60min_R1 2 LGADESEEEGR 11 0 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(1)EEEGR;LGADES(1)EEEGR 122.78 7.8718e-06 24346000.0 4207.5 5114.5 4181.8 4631.4 7428.5 5306.299999999999 5473.4 5684.700000000001 8040.1 6491.3 6716.1 True False 4917.62313650133 5374.806204204241 4774.842121255334 5766.09320791145 6335.777490474449 5867.809143963128 6467.845931162832 6490.523633663609 6219.030187401416 5024.910821596352 5048.307015069643 0.9741133258777229 1.0646749867153422 0.9458303758075742 1.1421835460282332 1.2550301460591824 1.1623320702261568 1.281191082843365 1.2856832229673871 1.2319041153473949 0.995365536722816 1.0 12.301583935800638 -6.307852595851253 9.14556725806322 1.152526947617747 1.0019365057074843 0.3738091987470099 0.09867914696535444 0.4754534353212903 91.0690086526029 0.01660969921387358 0.03876030365585977 4.922065674578644e-07 6.307852595851253 -0.15059044191026283 LGADES(ph)EEEGR ddPTM_A549_PD325901_60min_R1 2 LGADESEEEGR 11 0 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(1)EEEGR;LGADES(1)EEEGR 144.35 2.4331e-11 31099000.0 6116.700000000001 6283.1 5176.0 6335.4 6737.599999999999 6493.1 6256.2 6507.299999999999 8415.599999999999 6543.0 7535.0 True False 6737.662881123452 6812.598887541369 5527.274485816497 6726.723269262652 6264.374219458164 6440.222346380444 6494.283114524 6377.506796621906 8061.921598037327 6129.873863364633 6608.242768300456 1.019584648651805 1.0309244267207014 0.836421221134712 1.0179291992011164 0.9479636930876966 0.9745741148121856 0.9827549232417554 0.965083611518423 1.2199796346329959 0.927610270731798 1.0 12.690050972961462 -8.72017499625348 24.994350221948736 1.1038793037228571 0.9705424082730529 0.04687317154636217 0.08651385389447859 127.07545946212713 76971.08363534337 0.015036398316083345 0.017049584471213932 1.9046930791162978e-09 8.72017499625348 -0.1333368954498042 LGADES(ph)EEEGRR ddPTM_A549_MK2206_60min_R1 4 LGADESEEEGRR 12 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(1)EEEGRR;LGADES(1)EEEGRR;LGADES(1)EEEGRR;LGADES(1)EEEGRR 200.16 5.4159e-25 167429000.0 6626.889999999999 7171.639999999999 7215.43 6158.3 9846.599999999999 6800.6900000000005 7266.070000000001 6669.38 9726.69 9605.470000000001 10610.4 True False 7745.347020094904 7536.645843448881 8238.68647160778 7667.083776456588 8398.178183712143 7520.334501867333 8586.220865466501 7614.785039119635 7523.61024533221 7435.5876557113625 7975.544847857382 0.9711370405215237 0.9449694017423261 1.0329935607873977 0.961324138063914 1.0529911553275637 0.942924232178026 1.0765685641869567 0.9547667506584626 0.9433349556492578 0.932298394348434 1.0 12.961367364348606 LGADES(ph)EEEGRR ddPTM_A549_PD325901_60min_R1 4 LGADESEEEGRR 12 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(1)EEEGRR;LGADES(1)EEEGRR;LGADES(1)EEEGRR;LGADES(1)EEEGRR 160.27 2.4163e-14 206882600.0 6320.759999999999 5814.43 5975.759999999999 5792.799999999999 7063.599999999999 6799.4 6661.68 6422.0 6266.5 6798.6900000000005 7028.3 True False 6962.438902102422 6304.432421843862 6381.311008764062 6150.608099596661 6567.477104097111 6744.027940733882 6915.193877811166 6293.908172038464 6003.14079734076 6369.419553128308 6163.863656064511 1.1295575779409408 1.0228053009642821 1.0352777681066336 0.9978494727970163 1.0654805931074567 1.0941234779095994 1.1218927386570978 1.0210978897701615 0.9739249815226496 1.0333485470369796 1.0 12.589619234623953 -8.513375870624607 10.41862132562783 0.9881881716254023 1.0628458977803663 0.32453243794093245 0.04033101793718504 0.18784554602344455 193.23274965479666 0.006538744334343754 0.007654025146962751 3.066366978443626e-09 8.513375870624607 0.07465772615496402 LGADES(ph)EEEGRRGS(ph)LSNAGDPEIVK ddPTM_A549_MK2206_60min_R1 1 LGADESEEEGRRGSLSNAGDPEIVK 25 2 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 2 LGADES(0.954)EEEGRRGS(0.555)LS(0.492)NAGDPEIVK 40.254 0.030010000000000002 7889900.0 846.38 921.17 530.36 524.02 930.45 819.07 729.64 672.23 890.81 1264.0 1144.0 True False 989.2282519957214 968.0536183648094 605.573022963552 652.4049235241516 793.5820375596618 905.7434437453375 862.2061433868613 767.520661118034 689.0429573312591 978.4615221138739 859.9132272062167 1.150381481175302 1.1257573296202588 0.7042257332533495 0.7586869266376545 0.922862926690802 1.0532963269887348 1.002666450646531 0.8925559426637056 0.8012935904822627 1.1378607645015653 1.0 9.748047276339134 -8.309157510679347 24.35111025395868 0.9025238064958138 0.9507101246120154 0.0 0.15296122702949896 1218.615892437766 621870.6062230206 0.025191230935933416 0.030454750064194035 4.907298651114238e-09 8.309157510679347 0.048186318116201665 LGADES(ph)EEEGRRGS(ph)LSNAGDPEIVK ddPTM_A549_PD325901_60min_R1 2 LGADESEEEGRRGSLSNAGDPEIVK 25 2 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 2 LGADES(0.997)EEEGRRGS(0.772)LS(0.232)NAGDPEIVK;LGADES(0.985)EEEGRRGS(0.551)LS(0.464)NAGDPEIVK 65.69 7.4456e-05 21078000.0 4819.6 4592.0 4736.8 4994.0 6385.900000000001 5414.0 5731.0 6430.700000000001 5626.4 6865.6 6525.6 True False 5308.882243998007 4978.983955625401 5058.267732692343 5302.468037803091 5937.376414159033 5369.9101790059785 5949.096341123533 6302.434643713447 5389.941974333047 6432.104844309375 5722.992569186656 0.9276409465533342 0.8699965787886752 0.8838501311231333 0.9265201681987629 1.0374600949382056 0.938304586994972 1.0395079618230243 1.1012480913650988 0.9418048178767876 1.1239058528471053 1.0 12.48255401833483 -6.563517907097238 6.2514789277183676 0.9880636137135601 0.8934325120132891 0.41008587867948665 0.06247803984723928 0.13618107838838406 13.882208751764102 0.007268380542317273 0.015386846617968105 2.7320087936888687e-07 6.563517907097238 -0.094631101700271 LGADESEEEGRRGS(ph)LSNAGDPEIVK ddPTM_A549_MK2206_60min_R1 4 LGADESEEEGRRGSLSNAGDPEIVK 25 2 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(0.002)EEEGRRGS(0.983)LS(0.015)NAGDPEIVK;LGADESEEEGRRGS(0.96)LS(0.039)NAGDPEIVK;LGADESEEEGRRGS(1)LSNAGDPEIVK;LGADESEEEGRRGS(0.995)LS(0.005)NAGDPEIVK 239.26 1.0057999999999997e-111 437218000.0 11804.400000000001 13564.099999999999 13300.0 10674.8 14112.0 8634.0 8371.2 8691.6 17014.8 17475.1 16432.6 True False 13796.694130128648 14254.454753044618 15186.13999060117 13290.126479209981 12036.143494053367 9547.644149214646 9892.138681432067 9923.660916908655 13160.974967052358 13527.462773015961 12351.931903311952 1.1169664986923469 1.1540263389261836 1.2294546399279676 1.0759552904956082 0.9744340875799428 0.7729676801937853 0.8008576114947383 0.8034096200164285 1.065499313797502 1.0951697984498125 1.0 13.592449083655309 -6.569747467169469 3.660491990974321 0.9735711784477615 1.165074976618304 0.45625183617798926 0.10868348215890784 0.21324196968508624 5.945714833822361 0.018138383244370986 0.04068301858667444 2.693100328207839e-07 6.569747467169469 0.19150379817054242 LGADESEEEGRRGS(ph)LSNAGDPEIVK ddPTM_A549_PD325901_60min_R1 4 LGADESEEEGRRGSLSNAGDPEIVK 25 2 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADESEEEGRRGS(0.995)LS(0.004)NAGDPEIVK;LGADES(0.007)EEEGRRGS(0.985)LS(0.007)NAGDPEIVK;LGADES(0.052)EEEGRRGS(0.946)LS(0.002)NAGDPEIVK;LGADES(0.001)EEEGRRGS(0.77)LS(0.229)NAGDPEIVK 175.28 1.0379e-48 565822000.0 26108.4 25411.199999999997 26872.1 30332.2 31376.4 37801.1 33136.5 35860.3 36489.9 40363.9 40550.1 True False 28758.905548011753 27552.691004614146 28695.80230106442 32205.751104575655 29172.62990670374 37493.26037451476 34397.52764048857 35145.03818463886 34956.3564000454 37815.31646545372 35562.6947682628 0.8086818430215544 0.7747638693905441 0.8069074204880954 0.9056049130820373 0.8203155046826839 1.0542862575187877 0.9672362531757841 0.9882557667143754 0.9829501568379875 1.0633422667171224 1.0 15.118077028281496 -6.908996545503417 1.279195080895757 0.9933777828914573 0.7981369637066409 0.7726605948769507 0.048112263259513614 0.13222004878976532 0.42907885181034167 0.00618587619997188 0.01563596074351632 1.2331146417195814e-07 6.908996545503417 -0.1952408191848164 LGAGEGGEASVS(ph)PEK ddPTM_A549_MK2206_60min_R1 6 LGAGEGGEASVSPEK 15 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEAS(0.007)VS(0.993)PEK;LGAGEGGEAS(0.006)VS(0.994)PEK;LGAGEGGEAS(0.002)VS(0.998)PEK;LGAGEGGEAS(0.001)VS(0.999)PEK;LGAGEGGEAS(0.049)VS(0.951)PEK;LGAGEGGEASVS(1)PEK 248.94 1.6894e-76 716271000.0 33278.6 36253.32 33160.88 32376.33 45021.5 35138.3 31556.65 33902.89 47273.6 43288.6 43205.2 True False 38895.2140963454 38098.45913755043 37863.59142041553 40308.5323034287 38398.896989620414 38856.61158308418 37290.084829106134 38708.72848074613 36566.20508042683 33509.6751947616 32476.156437141653 1.197654475264891 1.1731209390892938 1.1658889343540815 1.2411731166970694 1.1823719676908924 1.196465833581386 1.1482296219776484 1.191912243546054 1.1259400462367386 1.031823924719058 1.0 14.987093278784558 -9.868015163417368 0.48339484481203304 0.989874165386602 1.1959752812196638 0.8777407602857703 0.024357530298893863 0.21077081885486598 0.09922666348616628 0.018743112677196406 0.006786274993531177 1.3551420966590508e-10 9.868015163417368 0.2061011158330618 LGAGEGGEASVS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 LGAGEGGEASVSPEK 15 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEASVS(1)PEK;LGAGEGGEAS(0.002)VS(0.998)PEK 252.01 1.2768999999999997e-76 1028420000.0 38198.0 40449.0 36634.0 41250.0 42255.0 36967.0 41206.0 38451.0 41189.0 44052.0 46289.0 True False 42075.832840118645 43857.77918577785 39120.203538137845 43797.918814452845 39287.15457183638 36665.95300836981 42774.116878788394 37684.06464077402 39457.969568605855 41270.54920203864 40595.74645014727 1.0364591495266373 1.080354052354634 0.963652770523103 1.0788795044879378 0.9677652958070895 0.9031969162926131 1.0536600658720792 0.9282761849705392 0.9719730025671868 1.0166224989290453 1.0 15.30904095186736 -6.781274473570731 24.985082103933102 0.979602738321755 1.0372888144528627 0.2835805167792189 0.04762444295964988 232.0385624237614 292284.42445695394 0.006254312044248921 0.011830536043965875 1.6547238495245518e-07 6.781274473570731 0.057686076131107655 LGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A549_MK2206_60min_R1 4 LGAGEGGEASVSPEKTSTTSK 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEAS(0.014)VS(0.986)PEKTSTTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEAS(0.003)VS(0.992)PEKT(0.004)S(0.001)TTSK;LGAGEGGEAS(0.003)VS(0.997)PEKTSTTSK 229.76 1.5111999999999998e-76 669115000.0 29901.8 29933.4 28323.9 27027.8 37231.2 27619.4 26258.2 26114.800000000003 40491.4 45654.7 47266.1 True False 34948.49281117895 31456.882204111283 32340.654923292383 33649.612213324035 31754.539799872426 30542.066575726083 31028.975048353837 29816.652873220828 31320.162551478938 35341.271561433794 35528.62289200332 0.9836714729251456 0.8853954823898201 0.9102704324228543 0.9471127635768228 0.893773448422051 0.8596467886910529 0.8733514705220323 0.8392290622649458 0.8815473272545103 0.9947267494397681 1.0 15.116694149688307 -10.673471424408605 0.9878311005073728 0.9987053193466388 0.895174527135726 0.5016112604841677 0.038276001015149747 0.3563373548271606 0.630317223264954 0.025064616069412033 0.00698166143491581 2.1209409416001074e-11 10.673471424408605 -0.10353079221091277 LGAGEGGEASVS(ph)PEKTSTTSK ddPTM_A549_PD325901_60min_R1 5 LGAGEGGEASVSPEKTSTTSK 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEAS(0.003)VS(0.997)PEKTSTTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEAS(0.016)VS(0.976)PEKT(0.006)S(0.002)T(0.001)TSK;LGAGEGGEAS(0.03)VS(0.967)PEKT(0.001)STTSK;LGAGEGGEAS(0.115)VS(0.577)PEKT(0.199)S(0.04)T(0.047)T(0.01)S(0.012)K 277.59 9.232499999999997e-128 1235781600.0 53303.1 52755.3 53023.299999999996 55710.0 64851.6 56924.4 55920.600000000006 58896.9 76903.5 65504.3 67367.6 True False 58714.39147233171 57201.17427574146 56621.77999300501 59151.08017341013 60296.64734187443 56460.82655962467 58048.68903392646 57722.1551257758 73671.51333412506 61368.34731896624 59081.81227840187 0.9937811520686125 0.9681689181469489 0.9583622744372694 1.0011724064028684 1.0205619126533911 0.9556380277160974 0.9825136839132965 0.9769868746371696 1.2469406487900956 1.038701166270762 1.0 15.850426459629183 -8.703582352378781 24.99996739505506 1.1166110875668565 0.9819321802564361 0.3979549028768581 0.06039109137847516 66.43404052569802 28705.849937211602 0.014684823631713563 0.016651021055120917 1.9788717453492907e-09 8.703582352378781 -0.13467890731042031 LGAGGGS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 LGAGGGSPEK 10 0 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(1)PEK;LGAGGGS(1)PEK 134.38 7.6881e-07 135547000.0 16822.8 18270.0 15753.5 15957.2 24148.0 19531.3 18188.800000000003 19680.5 26016.0 21775.9 21044.8 True False 19662.077362028424 19199.864962520558 17987.583183604165 19866.714716345923 20595.861188662162 21598.089202172352 21493.469520359296 22470.271144003484 20123.417539015085 16856.709065980627 15818.795353067646 1.2429566805297518 1.2137374897385749 1.1371019589121836 1.2558930230103322 1.3019867018298665 1.3653434866634115 1.3587298552535605 1.4204792869797103 1.2721207329553492 1.0656126898254428 1.0 13.949352118151042 -10.413148211766016 0.8839773643051217 1.0087783516177204 1.2844006891389774 0.6123061012426534 0.07667395556488116 0.29553381764911296 0.4348444136374312 0.0482329464132773 0.016283020551882525 3.862351440139878e-11 10.413148211766016 0.275622337521257 LGAGGGS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 LGAGGGSPEK 10 0 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(1)PEK;LGAGGGS(1)PEK 148.1 3.3485e-08 175915000.0 23307.6 23268.1 24537.0 21996.9 25767.0 21615.2 24056.0 24472.0 23398.6 24861.0 24941.0 True False 25673.770393851748 25228.984446404036 26202.2283729674 23355.598554415472 23957.21481132428 21439.172977696722 24971.46424394831 23983.886762087397 22415.238212823337 23291.272217195183 21873.415114025414 1.173743115101835 1.153408569941463 1.1979029445734022 1.0677618667530189 1.0952663169622157 0.9801474925582035 1.1416353648377662 1.0964856944862136 1.0247708506409912 1.0648210211244347 1.0 14.416890866667178 -2.0000000006764136 0.15555955580739805 0.9772869643881037 1.7958381738709064 0.4433967681078669 0.05077999303407225 28.37868686807458 0.272197221984616 0.07402399704568138 5.335020179413962 0.009999999984425002 2.0000000006764136 0.8185512094828027 LGAGGGS(ph)PEKSPSAQELK ddPTM_A549_MK2206_60min_R1 4 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.97)PEKS(0.03)PSAQELK;LGAGGGS(0.999)PEKS(0.001)PSAQELK;LGAGGGS(0.889)PEKS(0.11)PS(0.001)AQELK;LGAGGGS(0.998)PEKS(0.002)PSAQELK 195.38 1.4961e-48 1367751000.0 12646.6 15016.7 13378.0 14091.9 17508.3 13353.699999999999 13415.8 14661.899999999998 18735.399999999998 20178.0 19163.6 True False 14781.036900315574 15780.98588848838 15275.201563478375 17544.41613260943 14932.852263104758 14766.77967053134 15853.277203072012 16740.269225185566 14491.861814285945 15619.775785770385 14404.749231546377 1.0261224727151186 1.0955404800750053 1.0604281489347769 1.2179605386109178 1.0366617303133494 1.0251327137436115 1.100559055089509 1.1621354149313758 1.0060474904032894 1.0843490250814711 1.0 13.814256924771042 -8.86704722752687 10.878548328374288 1.0026845129353332 1.0903058282191849 0.12396102813014453 0.06060590203133805 0.29023285319944025 27.97209592609651 0.009353783496496591 0.009951431616424176 1.3581657442800824e-09 8.86704722752687 0.08762131528385164 LGAGGGS(ph)PEKSPSAQELK ddPTM_A549_PD325901_60min_R1 5 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.994)PEKS(0.006)PSAQELK;LGAGGGS(1)PEKSPSAQELK;LGAGGGS(0.846)PEKS(0.098)PS(0.056)AQELK;LGAGGGS(0.921)PEKS(0.078)PSAQELK;LGAGGGS(1)PEKSPSAQELK 272.31 6.373799999999999e-101 2304252000.0 61160.899999999994 63497.799999999996 65876.7 66720.0 74954.0 63403.7 72759.2 71623.2 70369.5 67325.5 70126.09999999999 True False 67369.90954372507 68848.98245154847 70347.489010778 70841.14286788584 69689.48961726244 62887.36128862974 75528.09117136196 70194.61908868646 67412.11463152802 63074.55644015823 61501.03426597399 1.0954272614728706 1.1194768230042562 1.1438423735533565 1.1518691305502051 1.13314337635162 1.0225415237191018 1.2280783904336479 1.14135672556522 1.096113511522267 1.0255852961330572 1.0 15.908323052080107 -9.99397918038672 0.7305405063408111 1.0049819320956588 1.129313921238828 0.4588979340347975 0.04729830196819942 0.3792614549563877 0.40788149514092004 0.023138522121306498 0.009884158481576616 1.0139599927298972e-10 9.99397918038672 0.12433198914316912 LGAGGGS(ph)PEKSPSAQELKEQGNR ddPTM_A549_MK2206_60min_R1 1 LGAGGGSPEKSPSAQELKEQGNR 23 2 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.951)PEKS(0.046)PS(0.003)AQELKEQGNR 58.477 0.00047294 32452000.0 1622.3 2412.3 1794.4 1722.4 2431.3 1379.5 1418.4 1586.2 3125.7 3094.2 3295.1 True False 1896.1045785730512 2535.0757662336255 2048.872902190582 2144.3880773214746 2073.6589907236357 1525.4777743620116 1676.1049199330141 1811.0487075337683 2417.73394071723 2395.2180709847694 2476.8357298664396 0.7655350557605596 1.0235138873623753 0.8272138832158502 0.8657772703549896 0.8372210420411915 0.6158978393146287 0.6767121855204326 0.731194517947069 0.976138187754423 0.9670476092146525 1.0 11.274282473163266 -8.79658916809727 10.720416842883928 0.9888149256872976 0.7958706244003101 0.40776184532674 0.10083787413541732 0.3797993501622196 113.77655030768544 0.018786076300444366 0.020027361077688356 1.5973895239522404e-09 8.79658916809727 -0.19294430128698747 LGAGGGS(ph)PEKSPSAQELKEQGNR ddPTM_A549_PD325901_60min_R1 4 LGAGGGSPEKSPSAQELKEQGNR 23 2 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.857)PEKS(0.137)PS(0.006)AQELKEQGNR;LGAGGGS(0.99)PEKS(0.009)PS(0.001)AQELKEQGNR;LGAGGGS(1)PEKSPSAQELKEQGNR;LGAGGGS(0.997)PEKS(0.002)PS(0.001)AQELKEQGNR 122.78 2.8384999999999997e-16 128761500.0 6768.300000000001 6286.799999999999 7242.0 6825.4 7288.700000000001 13884.599999999999 11385.2 11270.0 9724.5 9104.7 10737.1 True False 7455.412833440885 6816.610699526515 7733.485669683749 7246.989456391911 6776.766856649948 13771.528421024452 11818.470016220486 11045.211008856033 9315.813082859688 8529.827688182178 9416.50476808478 0.7917388688326698 0.7239003077479399 0.8212692352575168 0.7696050323209122 0.7196690304472997 1.4624883393783317 1.2550803410918083 1.1729629284839744 0.989306893831099 0.9058379832283627 1.0 13.200975942219223 LGAGGGSPEKS(ph)PSAQELK ddPTM_A549_MK2206_60min_R1 1 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGSPEKS(0.855)PS(0.145)AQELK 135.21 2.4168000000000004e-13 25152000.0 4857.8 6320.8 5123.3 5534.8 7489.8 5999.0 5430.9 5997.8 8442.4 7168.4 9174.7 True False 5677.677878192788 6642.501721680347 5849.860978484739 6890.826248466615 6388.060341678067 6633.810198186085 6417.624231291742 6848.006517492143 6530.209879742507 5549.053461329982 6896.3687811616055 0.8232851314016382 0.96318829988113 0.8482523432424975 0.9991963114399957 0.9262933210776004 0.961927995542707 0.9305801987884376 0.9929872857435392 0.946905550872031 0.8046340962055273 1.0 12.751621208817559 -2.0000000000000004 0.2676086714982771 0.9815182910089444 0.1345706615319285 0.013392668292553589 0.06681018597771303 29.132612992363892 0.3595661980167952 0.015366267801979881 11.552784348552827 0.00999999999999999 2.0000000000000004 -0.8469476294770159 LGAGGGSPEKS(ph)PSAQELK ddPTM_A549_PD325901_60min_R1 2 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.085)PEKS(0.903)PS(0.012)AQELK;LGAGGGS(0.05)PEKS(0.942)PS(0.008)AQELK 156.23 4.0275e-23 69757000.0 23801.0 24091.0 25444.0 23405.0 31240.0 25698.0 24590.0 27019.0 27622.0 28521.0 29270.0 True False 26217.259998629874 26121.233117371863 27170.782847201506 24850.673693388344 29045.810172149275 25488.72400814474 25525.78590616432 26480.08484900454 26461.14339809246 26720.179192575673 25669.97555781742 1.0213200218901568 1.0175791970871986 1.0584654740322508 0.9680832627758553 1.1315090700701425 0.992939161579471 0.9943829455026814 1.0315586311861684 1.0308207477055467 1.04091175047646 1.0 14.647794301772388 -11.929950005082626 0.3645898581016604 0.97114604289015 1.0295190512136063 0.0 0.04205991515568043 13.935211391462781 1.2112927107788505 0.36170121518886206 0.011597677919238119 1.1750328140544837e-12 11.929950005082626 0.058373008323456266 LGAGGGSPEKS(ph)PSAQELKEQGNR ddPTM_A549_PD325901_60min_R1 1 LGAGGGSPEKSPSAQELKEQGNR 23 2 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.005)PEKS(0.972)PS(0.023)AQELKEQGNR 45.861999999999995 0.0043333 6364300.0 1618.3 1447.2 1810.3 1712.8 1884.0 2417.2 1829.5 2049.9 2258.3 1999.9 2544.9 True False 1782.5886246705052 1569.1606229488416 1933.157844218238 1818.5957659489643 1751.67433944716 2397.5151246201062 1899.122623640814 2009.0131363845596 2163.391504449795 1873.62597269493 2231.8934334502746 0.7986889508047922 0.7030625205626788 0.8661514995497691 0.8148219528284577 0.7848378032723785 1.0742068096476263 0.8509020167262056 0.9001384682058206 0.969307706195191 0.839478240588978 1.0 11.124052428897668 -6.51391502252576 0.3364819130371098 1.0000548022196813 0.6744582752726114 0.28537486087624797 0.08599903237140401 1.5708380227733516 0.22321896168846006 0.026069760486808355 0.1873248479001662 3.062562620158616e-07 6.51391502252576 -0.32559652694707 LGAGGGSPEKSPS(ph)AQELKEQGNR ddPTM_A549_PD325901_60min_R1 1 LGAGGGSPEKSPSAQELKEQGNR 23 2 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGSPEKS(0.449)PS(0.551)AQELKEQGNR 71.528 5.048100000000001e-05 6739900.0 1907.4 1880.2 1394.2 2278.7 1906.8 2417.8 2167.3 2753.4 2438.8 1953.9 2480.2 True False 2101.037843846336 2038.6510525624728 1488.8187960056719 2419.4501236968154 1772.8729461028881 2398.110238419036 2249.7777874920675 2698.481276999485 2336.3057171554533 1830.5304205453406 2175.1511232831817 0.965927296433096 0.9372457070869287 0.6844668308648104 1.1123135757321025 0.8150573664173304 1.102502815895991 1.034308726143241 1.2405948479232038 1.0740889183042253 0.8415647082867193 1.0 11.086899923433643 -7.271766828048666 24.895738139057023 1.057098402372792 0.9043921344714264 0.231944614760612 0.13166785541149711 627.5748275906564 1512853.5062722126 0.016597957581802367 0.0267045213553799 5.348514431314698e-08 7.271766828048666 -0.15270626790136566 LGAHEGLS(ph)PTPFMNSNLMGK ddPTM_A549_MK2206_60min_R1 1 LGAHEGLSPTPFMNSNLMGK 20 0 Q99081;Q99081-3;B4DGI9;H0YNQ5 Q99081 TCF12 Transcription factor 12 1 LGAHEGLS(0.835)PT(0.147)PFMNS(0.017)NLMGK 43.198 0.014734 1449500.0 1299.9 1479.3 1701.5 1505.8 2443.4 1145.0 1328.4 1622.2 2589.0 2316.8 1829.9 True False 1519.2913404962749 1554.5900513988333 1942.7982852637524 1874.7210675979313 2083.979096752408 1266.1631400105136 1569.7530849118846 1852.1518177791447 2002.5956337834446 1793.4332709125204 1375.485327329245 1.1045492891198305 1.1302120208125759 1.4124456631144506 1.3629524287533066 1.5150863883069061 0.9205210080059522 1.1412357905408166 1.3465442204137754 1.4559192991697327 1.3038548905460137 1.0 10.425725034783504 -7.225819400086615 24.999842347748135 1.2066504840530168 1.3045192166568615 0.08468343031923997 0.17832035414703298 1791.8879031227063 1257634.732728482 0.032242157028645385 0.05584391319519752 5.945393444218982e-08 7.225819400086615 0.09786873260384477 LGAHEGLS(ph)PTPFMNSNLMGK ddPTM_A549_PD325901_60min_R1 1 LGAHEGLSPTPFMNSNLMGK 20 0 Q99081;Q99081-3;B4DGI9;H0YNQ5 Q99081 TCF12 Transcription factor 12 1 LGAHEGLS(0.855)PT(0.142)PFMNS(0.003)NLMGK 66.87100000000001 0.00035229 2791400.0 2164.4 2198.7 2825.6 2510.9 2890.9 3193.8 2711.1 2671.8 2352.3 2890.2 3101.0 True False 2384.1282946529327 2383.992165338322 3017.3622077131167 2665.9925903323556 2687.853157063584 3167.790751701015 2814.2723940708447 2618.5088530134467 2253.441011343601 2707.712278755383 2719.5966588586184 0.8766477510137559 0.87659769604911 1.109488864050696 0.9802896990803188 0.9883278641001285 1.1648016779923895 1.0348124178281497 0.962829853641754 0.8285938298987846 0.9956300946081383 1.0 11.409176987088896 -8.523005918323705 24.999302063434673 0.9178294421097821 1.0075016470030056 0.07137273270753541 0.09146545176126072 6.764740061465866 1329586.1735971423 0.01708110529181627 0.019462020434088657 2.9991216483470454e-09 8.523005918323705 0.08967220489322347 LGAPENSGIST(ph)LER ddPTM_A549_MK2206_60min_R1 2 LGAPENSGISTLER 14 0 A0A1B0GV68;M0QYB0;Q9Y4F1-3;C9JME2;Q9Y4F1;Q9Y4F1-2 A0A1B0GV68;C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 LGAPENSGIS(0.085)T(0.915)LER;LGAPENSGIS(0.008)T(0.992)LER 172.43 1.308e-22 257940000.0 4854.0 5626.5 4750.2 4261.7 6701.9 5841.6 4962.1 5273.6 8264.8 7230.700000000001 8343.1 True False 5673.236531093869 5912.864817275421 5423.849788222079 5305.816691314981 5716.059387953247 6459.7542346597465 5863.649339537233 6021.148949722663 6392.835996173585 5597.279848060751 6271.278012154013 0.9046380211655244 0.9428484602047666 0.8648715266187242 0.8460503076138667 0.9114664310648121 1.030053877716864 0.9350007013200854 0.9601151373058907 1.0193832873911806 0.892526186402991 1.0 12.6145437618064 -7.154146638486215 5.104547971022682 1.0003087841728073 0.8904112847246397 0.3418755608610954 0.047138229716684604 0.10249545513767434 4.043811847177392 0.005361517737337667 0.009403127850628828 7.012184937077914e-08 7.154146638486215 -0.10989749944816762 LGAPENSGIST(ph)LER ddPTM_A549_PD325901_60min_R1 2 LGAPENSGISTLER 14 0 A0A1B0GV68;M0QYB0;Q9Y4F1-3;C9JME2;Q9Y4F1;Q9Y4F1-2 A0A1B0GV68;C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 LGAPENSGIST(1)LER;LGAPENSGIST(1)LER 268.38 1.2003999999999999e-83 404100000.0 23149.0 24890.0 26234.0 26599.0 28306.0 26059.0 25064.0 28321.0 29529.0 28040.0 29192.0 True False 25499.069438606904 26987.56765146261 28014.396997857395 28241.959819288044 26317.884210398784 25846.78414383392 26017.82423554706 27756.115437605295 28287.998819863617 26269.549614663654 25601.569063334693 0.9959963537986981 1.054137251693408 1.094245314752143 1.1031339426666154 1.0279793455351127 1.0095781270238788 1.0162589711272232 1.0841568096447742 1.1049322309067493 1.026091391104837 1.0 14.643944612060757 LGAQT(ph)PVGVSTLEPGQTLLPR ddPTM_A549_MK2206_60min_R1 2 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 LGAQT(1)PVGVSTLEPGQTLLPR;LGAQT(0.998)PVGVS(0.002)T(0.001)LEPGQTLLPR 139.44 2.1318e-18 8256200.0 1648.1100000000001 1882.0299999999997 1669.8899999999999 1330.2199999999998 2254.04 1914.34 1762.5900000000001 1809.23 2568.5 2344.5 3185.1000000000004 True False 1926.2706755791335 1977.8172881999224 1906.7055119477443 1656.123959715844 1922.4737019087336 2116.9141881639516 2082.829787665491 2065.6938930344973 1986.7388510516714 1814.8758216740325 2394.1517657119934 0.8045733370650722 0.8261035563932774 0.7964012721560748 0.6917372505094018 0.8029874001479651 0.8842021706733388 0.8699656460776125 0.862808249092005 0.8298299546022463 0.7580454370795952 1.0 11.225298892540925 -14.999999999978304 0.16932229312463998 1.747265385429544 0.7698886173027788 0.0 0.08535364486517592 22.389155067385598 0.23962629078314898 5.529779759619396 0.06444209986866739 1.0000000000499578e-15 14.999999999978304 -0.9773767681267651 LGAQT(ph)PVGVSTLEPGQTLLPR ddPTM_A549_PD325901_60min_R1 4 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 LGAQT(1)PVGVSTLEPGQTLLPR;LGAQT(1)PVGVSTLEPGQTLLPR;LGAQT(0.999)PVGVS(0.001)T(0.001)LEPGQTLLPR;LGAQT(0.924)PVGVS(0.064)T(0.012)LEPGQTLLPR 163.62 7.3941e-28 14129000.0 4924.07 5957.4 5685.799999999999 5943.200000000001 6339.200000000001 6221.5 5726.24 6138.5 6751.3 6095.5 6094.200000000001 True False 5423.957961491252 6459.451005497116 6071.672579492934 6310.297966013479 5893.956461052777 6170.83416673175 5944.155196718757 6016.062801939911 6467.5663392781735 5710.629089735462 5344.652034316738 1.014838370517914 1.2085821423027205 1.136027666629777 1.180675173144399 1.1027764620052132 1.154581089116802 1.1121687920097982 1.1256229148899133 1.2101005449468871 1.0684753755845793 1.0 12.383880308434417 -10.969221148730705 1.2215525724770555 0.9995619927795207 1.1466754869543831 0.31458329995847856 0.05559267673398516 0.2934882305406172 0.7750055631039635 0.036186227140051305 0.008260813942628745 1.0734426613613198e-11 10.969221148730705 0.1471134941748624 LGAQTPVGVS(ph)TLEPGQTLLPR ddPTM_A549_PD325901_60min_R1 1 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 LGAQTPVGVS(0.608)T(0.392)LEPGQTLLPR 101.92 1.1928e-09 6511500.0 1005.4 1087.7 896.58 1040.0 800.0 801.35 1212.3 989.54 1150.8 1222.5 1224.2 True False 1107.467467863639 1179.3642962834817 957.4273103735225 1104.2384379886291 743.810759850174 794.8240712867456 1258.434739896014 969.8028484208878 1102.4358780148007 1145.3111413668453 1073.6311608431865 1.0315157646820523 1.098481805760236 0.8917655758254983 1.0285081862950074 0.6927991539161504 0.7403138994797086 1.1721294852393165 0.9032923817703314 1.0268292484627515 1.0667640649209214 1.0 10.068282734395476 -7.767898911152243 24.999406925179542 1.0139200811938507 0.9164412692568106 0.17046285271561934 0.12827779016155325 263.5262239608625 1019888.7546269471 0.020052353744330512 0.028065778773161024 1.7064795526413882e-08 7.767898911152243 -0.09747881193704011 LGAQTPVGVST(ph)LEPGQTLLPR ddPTM_A549_MK2206_60min_R1 2 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 LGAQTPVGVS(0.203)T(0.797)LEPGQTLLPR;LGAQTPVGVS(0.044)T(0.956)LEPGQTLLPR 188.04 1.476e-44 13447600.0 1600.6599999999999 1612.04 1967.1599999999999 1964.52 2669.4900000000002 1836.0500000000002 2216.93 1595.49 3065.0 3043.7 3406.7 True False 1870.8122756202547 1694.0859504204527 2246.1328679632325 2445.827488190654 2276.8115572520187 2030.339592328649 2619.717484593271 1821.6555934832013 2370.7823937992484 2356.1260560585442 2560.722369863127 0.7305798932510795 0.6615656466151788 0.8771481416328981 0.9551318475502621 0.8891286240349892 0.79287767241912 1.0230384657956095 0.711383481052876 0.9258256270577154 0.9201021101652974 1.0 11.322335130985342 -2.0229365936468358 0.14237939828518137 1.020673720111 1.6651240419941345e-16 0.2970136754614473 0.09691584088694738 48.558447790615396 0.4409793319189944 0.19601322675829103 10.191877375495533 0.009485569411048228 2.0229365936468358 -1.0206737201109999 LGAQTPVGVST(ph)LEPGQTLLPR ddPTM_A549_PD325901_60min_R1 1 LGAQTPVGVSTLEPGQTLLPR 21 0 O94887-3;O94887-2;O94887;C9JWM9;C9JVQ5 O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 LGAQTPVGVS(0.154)T(0.846)LEPGQTLLPR 127.5 2.4977e-17 7289400.0 1483.3 1305.2 1369.4 1556.7 1522.2 1443.0 1306.2 1262.7 1994.8 1364.0 1811.1 True False 1633.8835240522537 1415.1937845997977 1462.3357188711575 1652.8538234777884 1415.2859233049178 1431.248686425125 1355.9081557800669 1237.5144579310129 1910.965493103861 1277.8768072183043 1588.3461815088187 1.0286696584620978 0.8909857316214667 0.9206656180468417 1.0406130871972077 0.8910437408301598 0.9010936677957307 0.8536603490884135 0.779121373122489 1.2031164964860346 0.8045329299714814 1.0 10.633309668122793 -8.766733993502637 24.999999639055712 1.0959161186605197 0.9138540626170887 0.0 0.11980105885181513 91.65579807789356 432777.4170724782 0.01694195485476146 0.018297925921072863 1.7110630247387547e-09 8.766733993502637 -0.18206205604343106 LGASEAAAFDS(ph)DESEAVGATR ddPTM_A549_MK2206_60min_R1 2 LGASEAAAFDSDESEAVGATR 21 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H3BLZ3 WWC1 Protein KIBRA 1 LGASEAAAFDS(0.997)DES(0.003)EAVGATR;LGASEAAAFDS(0.997)DES(0.003)EAVGATR 185.87 1.874e-44 12935300.0 2832.2 4520.700000000001 3728.2 2729.3 5019.200000000001 3721.7 3471.6000000000004 3915.1 5989.7 5204.700000000001 5502.0 True False 3310.2061193580657 4750.784320529103 4256.914820523254 3397.9786225229323 4280.882328894035 4115.5278237354805 4102.344782881733 4470.077414490895 4633.042513585434 4028.9546551788653 4135.701552525003 0.8003977263149125 1.1487251341017508 1.0293089978710495 0.821620849417516 1.0351042681695428 0.995122054013495 0.9919344350119017 1.0808510618378018 1.1202555249076873 0.974188926354958 1.0 12.013916363876955 -8.163464783413618 4.952602774821138 1.06009958346428 0.9796698405633393 0.09394941082615527 0.09842985834078011 0.35935236950335314 14.219923373605777 0.015354184982421587 0.019920802979743336 6.86333530382929e-09 8.163464783413618 -0.08042974290094063 LGASEAAAFDS(ph)DESEAVGATR ddPTM_A549_PD325901_60min_R1 2 LGASEAAAFDSDESEAVGATR 21 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H3BLZ3 WWC1 Protein KIBRA 1 LGASEAAAFDS(0.999)DES(0.001)EAVGATR;LGASEAAAFDS(1)DESEAVGATR 257.72 1.8666999999999997e-98 43487000.0 6252.0 6787.4 6834.6 6133.4 8005.200000000001 7896.9 7557.7 7148.3 7624.5 7807.5 7659.0 True False 6886.698437520854 7359.398018382372 7298.43705578853 6512.246188037937 7442.942368440759 7832.5902646088525 7845.312409232128 7005.721548767132 7304.0687799129655 7314.5331175637175 6716.991554401217 1.025265311374173 1.0956390161842957 1.0865633813409112 0.9695182933155359 1.1080767793378976 1.166086067128766 1.167980091338896 1.0429850167336787 1.087401810878722 1.0889597014262984 1.0 12.71359949960455 -10.569307875709441 0.8004771465493071 0.9984663062880452 1.085159008768166 0.0 0.060326989984000164 0.8002476978737125 0.8918472834750688 0.04205341467401543 0.010849936203681115 2.695827655651388e-11 10.569307875709441 0.08669270248012073 LGASNS(ph)PGQPNS(ph)VKR ddPTM_A549_PD325901_60min_R1 2 LGASNSPGQPNSVKR 15 1 P49756 P49756 RBM25 RNA-binding protein 25 2 LGAS(0.032)NS(0.968)PGQPNS(1)VKR;LGAS(0.032)NS(0.968)PGQPNS(1)VKR 87.352 9.8539e-06 37115000.0 8830.900000000001 8080.5 8760.7 9966.4 9453.5 10893.599999999999 9656.1 9954.2 10654.7 10403.5 10947.0 True False 9727.406467035025 8761.472093517217 9355.253784368742 10582.001892663342 8789.518772804517 10804.886133361562 10023.568169520668 9755.655672081168 10206.920011717315 9746.621234527578 9600.58839875051 1.0132094058215246 0.9125974085773221 0.9744458772533466 1.1022243067977542 0.9155187586157166 1.1254399922787846 1.0440576924248943 1.0161518510001784 1.0631556721091926 1.015210821432161 1.0 13.228907112781913 -6.022808862273372 24.30511866569204 1.0331865271968452 0.958057959684082 0.22649022644237093 0.05637693594559228 496.0625554217348 528605.7648226295 0.007220501239809293 0.01926953033741599 9.48835964452089e-07 6.022808862273372 -0.0751285675127632 LGASNS(ph)PGQPNSVK ddPTM_A549_MK2206_60min_R1 6 LGASNSPGQPNSVK 14 0 P49756 P49756 RBM25 RNA-binding protein 25 1 LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGAS(0.001)NS(0.999)PGQPNSVK;LGAS(0.001)NS(0.999)PGQPNSVK;LGAS(0.001)NS(0.998)PGQPNSVK 290.32 1.7503999999999997e-116 1080429100.0 66687.56 73913.41 66969.14 62814.93 89010.1 63929.44 67877.81 71457.97 93866.2 89733.20000000001 91318.23 True False 77942.78977369479 77675.28685930026 76466.37105941118 78204.59066986926 75916.83220096632 70694.41090787222 80210.32945239586 81587.35607835502 72605.65557352001 69462.40779758611 68641.393236066 1.135507105831028 1.1316099979521923 1.1139979457647973 1.1393211440349742 1.105992006017116 1.0299093240247275 1.1685416870334042 1.1886028565557565 1.0577532324237715 1.0119609250747075 1.0 16.066791215521583 -9.051299656326277 3.0351551433422883 1.022402315602859 1.124298629416353 0.5758166507129509 0.03976678269870494 0.13225226548116525 2.5203857941420145 0.007977998399822573 0.007927008596964717 8.885877947609314e-10 9.051299656326277 0.10189631381349407 LGASNS(ph)PGQPNSVK ddPTM_A549_PD325901_60min_R1 4 LGASNSPGQPNSVK 14 0 P49756 P49756 RBM25 RNA-binding protein 25 1 LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGAS(0.001)NS(0.999)PGQPNSVK 296.29 8.462599999999996e-117 1513666500.0 104421.09999999999 101217.9 109461.8 102649.5 116788.29999999999 101102.0 108992.09999999999 109610.2 110839.1 103934.0 107513.3 True False 115021.85320124899 109747.88765725096 116890.53599527587 108989.92648107086 108585.49270576247 100278.65883226125 113139.85400826552 107423.93857346136 106180.91808035302 97371.58950251264 94289.84568296176 1.2198752937617068 1.1639417464555515 1.2396937883248447 1.1559031165194218 1.1516138553335646 1.0635149321320998 1.1999155708525036 1.1392948816000972 1.1261119085651445 1.032683729591762 1.0 16.52481479125966 -14.999999999507628 0.1177316550995543 0.44186701168086445 1.248175686965956 0.6952461144504795 0.040025514765081927 30.232562742951018 0.24887031134031487 3.989196711063324 0.1555105419375456 1.0000000011337293e-15 14.999999999507628 0.8063086752850914 LGASNS(ph)PGQPNSVKR ddPTM_A549_MK2206_60min_R1 3 LGASNSPGQPNSVKR 15 1 P49756 P49756 RBM25 RNA-binding protein 25 1 LGAS(0.002)NS(0.998)PGQPNSVKR;LGAS(0.035)NS(0.964)PGQPNSVKR;LGAS(0.001)NS(0.999)PGQPNSVKR 125.23 7.024499999999999e-08 811877600.0 8468.04 8695.95 8540.31 8235.25 12200.939999999999 7770.09 7807.5 7628.11 14162.7 13226.31 13864.69 True False 9897.238128299166 9138.536711594457 9751.454377679029 10252.886619694416 10406.197888487488 8592.315766431693 9226.021688083063 8709.417952607118 10954.871063184548 10238.477384928761 10421.70482702252 0.9496755370231308 0.8768754117751516 0.9356870626765792 0.9838012868210991 0.9985120535658596 0.8244635507381297 0.8852699094068409 0.8356999259875794 1.0511592148320663 0.9824186690052219 1.0 13.3473036786926 -8.778097325827892 24.999872653249877 1.0241585261816266 0.9124854430197322 0.39117949521951345 0.05486801168972725 157.8752556884296 236934.74235256138 0.00982983443676648 0.01047857726815277 1.6668736226452045e-09 8.778097325827892 -0.1116730831618944 LGASNS(ph)PGQPNSVKR ddPTM_A549_PD325901_60min_R1 8 LGASNSPGQPNSVKR 15 1 P49756 P49756 RBM25 RNA-binding protein 25 1 LGAS(0.03)NS(0.97)PGQPNSVKR;LGAS(0.001)NS(0.998)PGQPNSVKR;LGASNS(1)PGQPNSVKR;LGAS(0.006)NS(0.993)PGQPNS(0.001)VKR;LGASNS(1)PGQPNSVKR;LGASNS(1)PGQPNSVKR;LGAS(0.062)NS(0.938)PGQPNSVKR;LGAS(0.005)NS(0.96)PGQPNS(0.035)VKR 148.03 4.4004e-14 1270753400.0 19862.77 20180.500000000004 20528.879999999997 20470.5 24395.2 28236.199999999997 25001.16 25637.899999999994 25914.3 27519.699999999997 26431.399999999998 True False 21879.223788201565 21881.181558470922 21922.093246983863 21734.916293121383 22681.765310871182 28006.253748882278 25952.5928249597 25126.531971956516 24825.212090405763 25782.101445458622 23180.505362449447 0.9438631059202077 0.9439475635383117 0.9457124814239766 0.9376377241684385 0.9784845048121261 1.2081813278432727 1.1195870158638046 1.0839510001649695 1.0709521514841782 1.1122320692465812 1.0 14.500624398695912 -7.015075507275348 24.89344712903226 1.058050012769612 0.9449540378176506 0.6061341147443907 0.05520651055043014 485.94629076400213 802420.2328182315 0.009235590657534591 0.016357601546115267 9.65882934122802e-08 7.015075507275348 -0.11309597495196133 LGAVGGS(ph)GFK ddPTM_A549_PD325901_60min_R1 2 LGAVGGSGFK 10 0 O95163;F5H2T0 O95163 IKBKAP Elongator complex protein 1 1 LGAVGGS(1)GFK;LGAVGGS(1)GFK 78.342 0.001338 7390600.0 7324.9 7568.7 8557.8 8516.7 9745.1 8968.4 8936.2 9670.3 10566.9 9764.4 10053.4 True False 8068.518455693626 8206.540911354961 9138.583770231911 9042.757216170927 9060.637794769907 8895.364323863543 9276.271981076272 9477.418280296404 10122.8099403846 9147.87411759707 8816.895533753386 0.9151201151023308 0.9307744296093985 1.036485431322966 1.0256169171510405 1.0276449074488194 1.0088998207826958 1.0521018362488557 1.0749155690928132 1.1481149914538322 1.0375391295696554 1.0 13.106055050822667 -5.09279929667954 0.5650861004802915 1.0677130202358138 0.763496424602578 0.5733862735205135 0.03962606982687097 2.897034020003097 0.5420691769206205 0.010162242817138576 0.6005223863286049 8.076081692131716e-06 5.09279929667954 -0.3042165956332358 LGDAS(ph)DTEAADGER ddPTM_A549_MK2206_60min_R1 2 LGDASDTEAADGER 14 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 LGDAS(0.848)DT(0.152)EAADGER;LGDAS(0.858)DT(0.142)EAADGER 263.51 1.9683999999999993e-83 72465000.0 9571.900000000001 10049.7 8340.0 8146.700000000001 11611.8 8476.1 8045.400000000001 8568.099999999999 12822.2 13697.0 12629.8 True False 11187.402709513268 10561.186804260704 9522.737407640136 10142.641865719263 9903.71960205844 9373.035276020177 9507.145038655583 9782.654413705757 9917.992172845918 10602.838187020367 9493.472095252684 1.1784310942576692 1.1124683043564159 1.0030826774539197 1.0683806476653788 1.043213642246961 0.9873137227324097 1.0014402468628665 1.0304611753794148 1.0447170511835726 1.1168556752089083 1.0 13.212720112527602 -5.559269432111474 2.96582246448502 1.0222030535422952 1.1742710030692907 0.5894199508862886 0.036924947741951944 0.08688701874940395 1.4366574299067978 0.0035969972035543828 0.022452884246407512 2.7588657514623414e-06 5.559269432111474 0.15206794952699543 LGDAS(ph)DTEAADGER ddPTM_A549_PD325901_60min_R1 1 LGDASDTEAADGER 14 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 LGDAS(0.86)DT(0.14)EAADGER 245.93 4.9557e-58 51548000.0 4511.0 4192.2 4301.5 4230.2 5230.7 5364.6 4740.7 5371.8 5199.0 4968.5 5428.6 True False 4968.953399177318 4545.491406527181 4593.425657020798 4491.489846518752 4863.313676935378 5320.9124762274605 4921.1099327105785 5264.655234904424 4980.504110009513 4654.788062070486 4760.916614730701 1.043696792294772 0.9547513166819651 0.9648195985639254 0.943408635350109 1.02150784617564 1.117623539081546 1.033647579015399 1.1058070663567412 1.046122945022685 0.9777083781867039 1.0 12.217023645636155 -6.926206759865184 7.202848683739158 1.037558438120731 0.9747336211494373 0.3349685513373537 0.0451189438859188 0.22222885176005552 18.205662428594007 0.006538392972689178 0.012406942197537678 1.185204359150961e-07 6.926206759865184 -0.06282481697129372 LGDASDT(ph)EAADGER ddPTM_A549_PD325901_60min_R1 1 LGDASDTEAADGER 14 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 LGDAS(0.33)DT(0.67)EAADGER 248.99 1.9431999999999996e-69 47340000.0 4173.7 4463.3 4119.6 4138.2 4155.2 4373.6 3976.6 4662.6 4993.9 4682.3 4003.4 True False 4597.410951484453 4839.437954952716 4399.18082916724 4393.807215465909 3863.3530866618007 4337.98285166246 4127.931689079017 4569.600785261062 4784.023749755051 4386.658778913682 3511.0071796435354 1.3094279550722017 1.3783617370569015 1.2529683375964724 1.251437832693923 1.1003546529500512 1.235538017926493 1.1757115488149235 1.301507103646824 1.3625787430718845 1.2494018253073038 1.0 11.777669231044678 -10.914035483376665 1.1437061902827046 0.9986196225008316 1.2672373045655625 0.04802503520504697 0.10374548668988859 0.2828120569767897 0.6516368085795107 0.06051115795238147 0.014046897848582896 1.2188900072838399e-11 10.914035483376665 0.2686176820647309 LGDDEDREPS(ph)LRPDDDRVPR ddPTM_A549_MK2206_60min_R1 1 LGDDEDREPSLRPDDDRVPR 20 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LGDDEDREPS(1)LRPDDDRVPR 44.258 0.013812999999999999 2235300.0 132.5 208.85 117.21 0.0 152.77 223.24 170.91 101.17 241.35 179.55 174.46 True False 154.86276068601933 219.47957292952495 133.83214047356117 0.0 130.29773537319528 246.8631086252812 201.96213470512663 115.51115732013072 186.68461035675332 138.98953029710935 131.1367671489481 1.1809255638437595 1.6736692363342698 1.020553910113947 0.0 0.9936018570993149 1.8824858504014248 1.5400877960925594 0.8808449364084943 1.4235871023472213 1.0598822383599094 1.0 7.034928424127297 -7.034338163749171 24.969593556548674 1.2566368731175643 0.9570791701263007 0.11022980775202829 0.4501854475722437 1245.2231763115801 905483.9644641711 0.0699177640314622 0.12114452175193799 9.239784372062439e-08 7.034338163749171 -0.2995577029912636 LGDDEDREPS(ph)LRPDDDRVPR ddPTM_A549_PD325901_60min_R1 1 LGDDEDREPSLRPDDDRVPR 20 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LGDDEDREPS(1)LRPDDDRVPR 49.577 0.0044385 2239800.0 168.31 200.64 258.47 128.48 314.51 368.33 147.95 179.54 164.27 269.99 187.38 True False 185.39670729672676 217.54863694614124 276.01132850637373 136.4159178007491 292.4199026005975 365.33044259942216 153.58031821134645 175.9589338535947 157.36630316431288 252.9427853232185 164.3334478996866 1.1281739029165732 1.3238244540389523 1.67958094979458 0.8301165681378566 1.7794302154428 2.223104591722735 0.9345651793607828 1.0707432729154722 0.9576036112890016 1.5392045171328805 1.0 7.360482341443279 LGDDIDLIVR ddPTM_A549_PD325901_60min_R1 1 LGDDIDLIVR 10 0 O15371-2;O15371-3;O15371 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 0 107.47 0.00073568 865220.0 471.78 444.27 390.5 345.02 613.86 481.21 411.23 334.81 660.33 486.01 163.22 False True 519.6747582939206 481.71019206570077 417.00167826726084 366.3311018027276 570.7445913020347 477.2911853046671 426.8795826836906 328.13195189663605 632.5786264594309 455.3232456570146 143.14497473682812 3.6304086765835972 3.365191079542432 2.913142281340424 2.5591614548553094 3.9871786791771626 3.3343202315147034 2.9821485767733606 2.2923050739287656 4.419146586336168 3.1808538615772286 1.0 7.161333213590761 -10.986822468977278 1.2329480003484359 0.9874322139205184 3.3518870559890996 0.03915182456155519 0.852841217016033 0.233356449284538 0.6255890725898438 0.4682329424388511 0.10497419399255788 1.0308074080762709e-11 10.986822468977278 2.3644548420685814 LGDLQRS(ph)WETLK ddPTM_A549_MK2206_60min_R1 1 LGDLQRSWETLK 12 1 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F5GZ83;F5H6R8 Q8NF91 SYNE1 Nesprin-1 1 LGDLQRS(0.987)WET(0.013)LK 44.601000000000006 0.01635 2329600.0 664.63 1110.4 956.57 963.1 899.16 1031.5 524.63 739.45 1092.1 1069.5 1334.6 True False 776.8032953565961 1166.9146170981303 1092.2260098352904 1199.059543235202 766.8947551100496 1140.6526453457152 619.9484800792844 844.2693019706501 844.7410937253377 827.8992071999915 1003.1819869138264 0.7743393576536813 1.1632132876388743 1.088761584720433 1.1952562534779658 0.7644622462463793 1.1370346160767912 0.6179820692220405 0.8415913692469171 0.8420616645281741 0.8252731986814553 1.0 9.9703676331864 -6.7600745548784085 24.999834805042344 0.9007101751348142 1.0654775761545736 0.22684740715296448 0.16195686468447473 46.20895522073701 846389.4022423554 0.02229205851922217 0.044493253918564415 1.7375025279081854e-07 6.7600745548784085 0.1647674010197594 LGDLQRS(ph)WETLK ddPTM_A549_PD325901_60min_R1 2 LGDLQRSWETLK 12 1 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F5GZ83;F5H6R8 Q8NF91 SYNE1 Nesprin-1 1 LGDLQRS(0.984)WET(0.016)LK;LGDLQRS(1)WETLK 73.887 0.00038268 3596200.0 1416.67 1394.04 1284.65 1520.42 1306.82 1329.17 1279.08 1066.92 1420.57 1359.43 1978.05 True False 1560.4892955026667 1511.5206431838053 1371.834074228007 1614.3328902756466 1215.0334714842543 1318.3456802049086 1327.7560893394323 1045.6394436174514 1360.8683830652458 1273.5953577982243 1734.7623898920654 0.8995406544407262 0.8713127815030911 0.790790763173832 0.9305786773346454 0.7004033973550995 0.7599574949782802 0.765382104820732 0.6027565790623981 0.784469614394809 0.7341612691277367 1.0 10.760522355304317 -10.50262790815235 0.9746566984282228 0.9918794583359866 0.7889440162819579 0.0 0.11568913154221232 0.3875896787465105 0.6949388603218438 0.04952449725110517 0.016589976632783294 3.1432005503666704e-11 10.50262790815235 -0.2029354420540287 LGDLYEEEMR ddPTM_A549_MK2206_60min_R1 1 LGDLYEEEMR 10 0 P08670;B0YJC4 P08670 VIM Vimentin 0 123.86 7.140000000000001e-05 2908000.0 1625.3 2120.6 2041.0 1944.9 2823.2 2049.3 1556.3 1582.6 2799.5 2654.7 2900.6 False True 1899.6109052300912 2228.5294821850644 2330.4444902869914 2421.4005873098777 2407.911019870425 2266.1555657847553 1839.059564926501 1806.9383965092313 2165.4177198828693 2055.001426230777 2180.3009675125463 0.871260864227067 1.022120117997994 1.0688636683703994 1.1105808892395237 1.1043938684380596 1.039377406858723 0.8434888542129303 0.8287564072269915 0.9931737646079858 0.9425310802734171 1.0 11.090311582218316 -7.570547487877611 24.99997640650007 0.9696844713623152 1.043850451142224 0.23653543924672327 0.08366471430321164 183.98048779439256 96488.34039317777 0.013847325023212701 0.02053890706245084 2.6881438922250017e-08 7.570547487877611 0.0741659797799088 LGDLYEEEMR ddPTM_A549_PD325901_60min_R1 2 LGDLYEEEMR 10 0 P08670;B0YJC4 P08670 VIM Vimentin 0 ; 136.57 1.4285e-06 12958500.0 3535.6 3407.1 2916.6000000000004 3569.7 4216.0 3567.2 3410.0 3919.3 3265.9 3899.4 4185.2 False True 3894.531509228844 3694.2282742184884 3114.538014940571 3790.1922616230877 3919.8827044104137 3538.1499059013904 3539.769416023599 3841.1264868686285 3128.6455804731813 3653.1912185242313 3670.446932168687 1.06105103307617 1.0064791406848512 0.848544624809585 1.0326241821956132 1.0679578745726062 0.9639561533752706 0.9643973830544181 1.0465010277642388 0.8523881800477683 0.9952987431875877 1.0 11.841740028266143 -8.746277672566908 24.999973202471935 0.9302944076293213 0.995283111326088 0.07438898060438814 0.06900022907622642 365.7955822785393 603156.1204000738 0.01296998399279471 0.014678884186548283 1.793586504235697e-09 8.746277672566908 0.06498870369676679 LGDS(ph)LQDLYR ddPTM_A549_MK2206_60min_R1 2 LGDSLQDLYR 10 0 A0A2R8Y700;Q8WXI2-5;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 LGDS(0.94)LQDLY(0.06)R;LGDS(1)LQDLYR 107.52 0.00026424 24358000.0 4779.6 5350.700000000001 4438.200000000001 5087.5 6783.5 5929.1 5054.299999999999 5000.0 6780.299999999999 6425.6 7023.9 True False 5586.27962999923 5623.027775312471 5067.603496713245 6333.93772838655 5785.656136048112 6556.513426581949 5972.600886081105 5708.765311857798 5244.572875914206 4974.052497226989 5279.671780221807 1.058073278518185 1.065033587197013 0.9598330554745861 1.1996839940153345 1.0958363278796561 1.2418411029153975 1.1312447316242427 1.081272766470715 0.9933520669903978 0.9421139616785081 1.0 12.366232529441907 -8.676923922963558 3.9566632961924526 0.9966602118797483 1.1081865219232891 0.3755610109116251 0.07160691212581762 0.19110842210651316 5.738002973457085 0.012260204934074913 0.013781584506333874 2.1041469990154072e-09 8.676923922963558 0.11152631004354085 LGDS(ph)LQDLYR ddPTM_A549_PD325901_60min_R1 2 LGDSLQDLYR 10 0 A0A2R8Y700;Q8WXI2-5;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 LGDS(1)LQDLYR;LGDS(1)LQDLYR 119.87 5.5438e-05 77356000.0 4738.4 5151.7 5236.1 5423.0 5249.9 5086.299999999999 5349.4 5094.4 5081.0 5487.9 6092.5 True False 5219.438879774285 5585.851838892721 5591.453233227156 5757.966393473398 4881.165135171786 5044.878859157388 5552.974344303999 4992.788195520512 4867.46323965346 5141.393057429125 5343.161123539549 0.9768447477243012 1.0454208117146209 1.0464691413840663 1.0776329330789605 0.9135350820074621 0.9441749448527643 1.0392676200311661 0.9344259100712025 0.9109707020081464 0.9622380719118641 1.0 12.383477807086978 -6.759425040371201 24.999999542177523 0.9578759958933513 1.0379280604493426 0.4571104191569074 0.041295672769749714 42.03488362413426 521680.7503353889 0.006724092466813661 0.013471514618557206 1.7401030155080754e-07 6.759425040371201 0.08005206455599134 LGDS(ph)SGPALKR ddPTM_A549_PD325901_60min_R1 1 LGDSSGPALKR 11 1 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 LGDS(0.676)S(0.324)GPALKR 40.552 0.041316000000000005 7293100.0 2007.2 2165.5 1822.6 2008.1 2583.1 2239.0 2249.2 2611.4 2520.1 2409.1 2641.5 True False 2210.969466377458 2347.9942848229102 1946.2925961841465 2132.135776274006 2401.671967211231 2220.766326338085 2334.794536809467 2559.3135783963326 2414.188960883818 2256.989014860421 2316.6122458481273 0.9543977289855028 1.0135465220953686 0.8401460363823622 0.9203679986131718 1.0367172890135365 0.9586266887426591 1.0078486552913317 1.104765626178131 1.0421204347903148 0.974262748936701 1.0 11.177800871028639 -6.760081100050852 24.973184649976805 1.0221785325304438 0.931361946644338 0.38040249170638074 0.0523865360544005 27.25680864136379 501122.4173632087 0.007373475590115411 0.014711751136137376 1.7374763425237394e-07 6.760081100050852 -0.09081658588610575 LGDS(ph)SGPALKRSFEVEEVETPNSTPPR ddPTM_A549_PD325901_60min_R1 1 LGDSSGPALKRSFEVEEVETPNSTPPR 27 2 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 LGDS(0.417)S(0.417)GPALKRS(0.167)FEVEEVETPNSTPPR 177.03 2.0824999999999998e-49 18261000.0 2491.9 2681.5 2913.5 3184.4 3385.8 4075.6 3530.5 4363.6 3585.3 3397.3 3446.0 True False 2744.8758535601773 2907.4794157250694 3111.2276302987566 3381.093155702877 3147.9930883758993 4042.409664860872 3664.8551094637296 4276.564574822024 3434.6223092165983 3182.7938982131564 3022.1638459938094 0.9082485243805672 0.9620522128802625 1.0294702037492145 1.1187656685738152 1.041635480005126 1.3375878578587008 1.2126593051273094 1.4150670819820217 1.136477862962177 1.0531506762719958 1.0 11.561366162701223 -5.883263165344421 1.4863232691579673 1.1234437431966227 0.9068457422640693 0.3231438840346881 0.12284703990068674 0.6054539053816608 2.2754458139756935 0.02089952676607004 0.13670008045344467 1.3083888506466381e-06 5.883263165344421 -0.21659800093255333 LGDSS(ph)LSR ddPTM_A549_MK2206_60min_R1 2 LGDSSLSR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LGDS(0.003)S(0.995)LS(0.001)R;LGDS(0.003)S(0.989)LS(0.008)R 125.83 0.0010888 227270000.0 9686.4 9622.9 9081.0 9111.5 12741.7 10026.1 9553.7 11055.9 14660.8 13538.6 15073.3 True False 11321.227510257033 10112.664507270883 10368.822349973629 11343.817909030775 10867.41280882792 11087.05524721346 11289.483624904155 12623.107682273734 11340.152208486801 10480.220857033935 11330.183608083453 0.9992095363909169 0.8925419796424183 0.9151504255037891 1.0012033609885718 0.959155931160253 0.9785415338991917 0.9964078266877987 1.114113249962503 1.0008798269073271 0.9249824380212942 1.0 13.467883620083443 -6.925125415545297 1.1161629859651072 1.0091532130750107 0.9368701316167792 0.20574623091243838 0.050434170742170416 0.4505547811070632 1.1008076034815852 0.007021432289074121 0.018935855571639605 1.1881590613574688e-07 6.925125415545297 -0.07228308145823148 LGDSS(ph)LSR ddPTM_A549_PD325901_60min_R1 2 LGDSSLSR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LGDS(0.003)S(0.997)LSR;LGDS(0.002)S(0.998)LSR 140.11 0.0010867000000000001 280230000.0 12198.4 13161.6 13421.099999999999 12683.9 14446.900000000001 13456.2 14098.2 13851.0 12868.1 14995.3 13994.2 True False 13436.772588012544 14270.774222639226 14331.936553630554 13467.355695773043 13432.199583099344 13346.617168588888 14634.714715831062 13574.730939100713 12327.298507023159 14048.494198886092 12273.00211654283 1.0948236185750397 1.1627777855104897 1.1677612712469492 1.0973155196983417 1.0944510117043023 1.0874777859443965 1.192431531980661 1.1060644176703334 1.0044240512602163 1.1446664854681374 1.0 13.583200571409462 -8.721274538361277 4.415393788801163 1.0017063868716825 1.1282312646401567 0.1554862623952885 0.05416693143095591 0.07119673885112693 3.0247822517699414 0.005643180032527792 0.006284826139844362 1.8998768969743058e-09 8.721274538361277 0.1265248777684742 LGDSSGPALKRS(ph)FEVEEVETPNSTPPR ddPTM_A549_PD325901_60min_R1 1 LGDSSGPALKRSFEVEEVETPNSTPPR 27 2 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 LGDS(0.169)S(0.169)GPALKRS(0.661)FEVEEVETPNSTPPR 123.86 1.4840000000000002e-18 12674000.0 2107.4 2671.5 2703.0 2830.9 3563.7 4128.6 3803.3 4005.9 3134.8 3130.6 4008.6 True False 2321.341696614116 2896.6366806300634 2886.441834459424 3005.758263559625 3313.3980060975787 4094.978050432968 3948.036662745618 3925.9991819322445 3003.0552575606516 2932.933381728461 3515.56761260905 0.6603035277399631 0.8239456610764337 0.8210457463844011 0.8549851957843376 0.9424930398760181 1.1648127704174387 1.1230154267508496 1.1167468854392466 0.8542163281940007 0.8342702245887993 1.0 11.779541925819014 -6.182177642344635 1.2718678401723011 0.9758831398576048 0.7250786461467942 0.4865288061690497 0.1077251759998503 0.430267039457397 1.2194415544693373 0.018073074680297837 0.08950356953464907 6.57388886229216e-07 6.182177642344635 -0.2508044937108106 LGDT(ph)PRK ddPTM_A549_MK2206_60min_R1 2 LGDTPRK 7 1 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 LGDT(1)PRK;LGDT(1)PRK 69.825 0.013415999999999999 19436500.0 6429.9 7097.299999999999 6586.8 5987.4 8765.5 6765.700000000001 7082.1 6152.1 8819.1 11099.8 9825.900000000001 True False 7515.109924038006 7458.522254980688 7520.907284969305 7454.3132687846 7476.106561587634 7481.641883291817 8368.825897812752 7024.179015016074 6821.5879312087945 8592.347470854096 7385.857848955914 1.0174999407956875 1.0098383163487292 1.0182848680241634 1.009268445349021 1.012219123963302 1.012968572682379 1.1330878645323228 0.9510308969741452 0.9236013027482127 1.1633513190439666 1.0 12.850549780812454 LGDT(ph)PRK ddPTM_A549_PD325901_60min_R1 1 LGDTPRK 7 1 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 LGDT(1)PRK 60.59 0.017703 15846000.0 7452.9 7132.9 6962.9 7180.4 8525.0 7676.7 7728.0 7977.1 8244.3 8890.0 7875.4 True False 8209.512921465006 7734.01451591473 7435.444265319102 7623.917000128418 7926.23340965341 7614.183500401775 8022.093268923866 7817.99048258611 7897.820741325528 8328.68388282311 6906.775726273836 1.188617271911041 1.119772064770255 1.0765434639833715 1.1038315564709202 1.1476025462216022 1.1024222882229855 1.1614816503172802 1.131930555214925 1.1434888078501941 1.2058714822808334 1.0 12.753796662525376 -10.7093064856969 0.8468344905871434 0.9954868493905317 1.1292167467469454 0.0 0.06723733858574835 0.2772980089958146 0.3345188067496028 0.024112902383587608 0.005509134355542373 1.9529607465979592e-11 10.7093064856969 0.13372989735641372 LGDVS(ph)PTQIDVSQFGSFKEDTK ddPTM_A549_MK2206_60min_R1 1 LGDVSPTQIDVSQFGSFKEDTK 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.865)PT(0.135)QIDVSQFGSFKEDTK 100.27 2.5321e-10 51671000.0 2805.1 2812.1 3054.9 2377.0 3170.4 2306.0 2418.7 2510.2 3145.8 2829.6 2794.1 True False 3278.5323018894574 2955.223878549758 3488.130756187032 2959.3651067075857 2704.0383598034837 2550.0193894010845 2858.1464818400887 2866.0285371650884 2433.281322810334 2190.391394757452 2100.247856763016 1.5610216152975676 1.4070833921023322 1.6608186243137395 1.4090551727874037 1.287485356119374 1.2141516446212564 1.3608615157666084 1.364614432499564 1.1585686493976965 1.0429204285123608 1.0 11.036343879516513 -7.410626383545003 0.17433593039287015 0.8706706921983622 1.8097726486342864 0.7701425148684036 0.09263458154575864 2.0022643633220696 0.15520224743745373 0.23529549121701385 0.5361234351145108 3.884844290897215e-08 7.410626383545003 0.9391019564359242 LGDVS(ph)PTQIDVSQFGSFKEDTK ddPTM_A549_PD325901_60min_R1 1 LGDVSPTQIDVSQFGSFKEDTK 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.979)PT(0.021)QIDVSQFGSFKEDTK 288.37 1.0162999999999996e-141 90999000.0 28009.0 29235.0 30591.0 31294.0 34697.0 36147.0 35714.0 38534.0 35585.0 34356.0 34258.0 True False 30852.453060863998 31698.736050241427 32667.08921862684 33226.9593061694 32260.002418151827 35852.63081649965 37073.115813450684 37765.40914066178 34089.48620017091 32186.75629676836 30044.483179354607 1.0268924539885111 1.0550601207220485 1.0872907689447087 1.1059254741649764 1.0737412997112108 1.1933182741893917 1.2339408733422939 1.256983151123488 1.1346338027074425 1.071303377216548 1.0 14.874812484613269 -3.929224096995124 15.684679121755371 1.0960156442395041 0.40575003631392503 0.0 0.08137936754013342 0.0 0.0 0.01271308190805687 0.0 0.00011769984827586204 3.929224096995124 -0.6902656079255791 LGDVSPT(ph)QIDVSQFGSFKEDTK ddPTM_A549_MK2206_60min_R1 1 LGDVSPTQIDVSQFGSFKEDTK 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.447)PT(0.553)QIDVSQFGSFKEDTK 151.02 9.1449e-28 43196000.0 4758.6 6703.2 7030.6 5546.2 7119.9 4698.8 5001.1 4257.2 7426.3 6840.0 7768.0 True False 5561.735343399934 7044.364248317887 8027.6447983398975 6905.019248978377 6072.572141674501 5196.023897188996 5909.735134713054 4860.671137128206 5744.254907364232 5294.83924941369 5838.991214106547 0.952516477497554 1.206435151212294 1.374834197206143 1.1825705838187235 1.0400036442945213 0.8898838355221032 1.0121157778822472 0.8324504968230135 0.9837752270437675 0.9068071958426263 1.0 12.511503424979937 -6.84951456343671 3.7510771912977563 0.9738930659556075 1.196049677117568 0.5097341947955696 0.10689452134062546 0.14667981680301267 3.9972469762891 0.01498407272823568 0.02982192413571701 1.4141173038985308e-07 6.84951456343671 0.2221566111619604 LGDVSPT(ph)QIDVSQFGSFKEDTK ddPTM_A549_PD325901_60min_R1 1 LGDVSPTQIDVSQFGSFKEDTK 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(0.05)PT(0.95)QIDVSQFGSFKEDTK 234.73 3.9488999999999986e-98 118640000.0 18907.0 19739.0 20491.0 20787.0 22887.0 23945.0 24328.0 25090.0 24575.0 22615.0 23413.0 True False 20826.42472140224 21402.47480402653 21881.64248239294 22070.96577929774 21279.496075863663 23749.999858939453 25253.815352792415 24589.560267275756 23542.19821186455 21187.085040499962 20533.34942723536 1.0142731362559947 1.042327501407947 1.0656635713494074 1.0748838545562807 1.0363382823280949 1.1566549307068987 1.2298926408614002 1.1975425808835773 1.1465347285542349 1.0318377484190422 1.0 14.325681360523642 -7.217742289259964 24.91714991829131 1.1003610825039267 1.0490740991750824 0.21480976879952718 0.06650471555974027 1000.4574388620839 570484.5031385947 0.012698075359627747 0.02199355431898453 6.057001911776332e-08 7.217742289259964 -0.05128698332884429 LGDVTDADS(ph)EADENEQVSAV ddPTM_A549_MK2206_60min_R1 2 LGDVTDADSEADENEQVSAV 20 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 LGDVTDADS(1)EADENEQVSAV;LGDVTDADS(1)EADENEQVSAV 105.31 1.2208e-09 15187800.0 1455.6599999999999 1521.62 1621.38 1794.15 2808.7 1549.38 1843.98 2222.42 2632.3 2370.77 2058.87 True False 1701.339820529893 1599.0639586354985 1851.3160645083397 2233.716830542454 2395.5439506623916 1713.3343632047931 2179.0072971362674 2537.4548408758014 2036.0882529193364 1835.2114104287266 1547.5957570787275 1.0993438129743751 1.0332568768823218 1.1962529982654648 1.4433464425870888 1.5479132323186695 1.107094249495047 1.4079951351439506 1.6396108798240385 1.3156460552481075 1.1858467574845954 1.0 10.595812963238027 -10.481615680891291 0.9993062515468026 1.0145537405546372 1.311604517666986 0.14069490638523485 0.19000647176409038 0.5405874988506684 1.0288685255954462 0.10084281764565259 0.035293223124939 3.299015219559681e-11 10.481615680891291 0.29705077711234873 LGDVTDADS(ph)EADENEQVSAV ddPTM_A549_PD325901_60min_R1 2 LGDVTDADSEADENEQVSAV 20 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 LGDVTDADS(1)EADENEQVSAV;LGDVTDADS(1)EADENEQVSAV 157.58 9.049799999999999e-27 46663000.0 2163.12 2393.6000000000004 2444.1 2316.54 2511.3 2410.6 2228.75 2806.6 2531.7 2391.3 2735.82 True False 2382.71834999522 2595.31707233993 2609.971323567251 2459.6274145559405 2334.914951514676 2390.9688728318833 2313.5663008687975 2750.620161264893 2425.3014532239054 2240.3129098981894 2399.3314837918692 0.9930759322299251 1.0816834146811294 1.0877910539657862 1.0251303044916413 0.9731522998333726 0.9965146079162144 0.9642545502768423 1.1464110648512194 1.0108238355589756 0.9337237997467657 1.0 11.228416774092432 LGDVYVNDAFGTAHR ddPTM_A549_MK2206_60min_R1 2 LGDVYVNDAFGTAHR 15 0 P00558;P00558-2;P07205 P00558 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 ; 132.44 2.3128e-09 21818200.0 1025.04 1569.64 1692.38 1043.69 1854.2 1319.55 1407.82 1265.7 1616.29 1872.29 2025.1599999999999 False True 1198.0416921780923 1649.5279715254935 1932.3849321273387 1299.3940968530242 1581.449636243888 1459.1839051535999 1663.6026708827533 1445.1168510436842 1250.202895684759 1449.3383886381216 1522.2568804273965 0.7870167693653151 1.0836068424025542 1.2694210530254215 0.8535971251371186 1.0388848666592148 0.9585661420981143 1.0928527847518559 0.9493252220597261 0.8212824732536244 0.9520984317910904 1.0 10.571996118436275 -8.510674109339364 23.556357445469896 0.9140107836163612 1.0177889671421476 0.08731542794095715 0.12609368022344974 449.8315820163149 868228.4867283913 0.02144695117038257 0.025246430148539053 3.085502414936111e-09 8.510674109339364 0.10377818352578638 LGDVYVNDAFGTAHR ddPTM_A549_PD325901_60min_R1 2 LGDVYVNDAFGTAHR 15 0 P00558;P00558-2;P07205 P00558 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 ; 206.66 2.153e-39 45072000.0 1171.42 1164.23 1801.23 1482.0 1537.38 2044.53 1589.44 1594.2 2075.08 1948.1599999999999 1698.88 False True 1290.3416960461745 1262.3437479655404 1923.472299475899 1573.5397741337968 1429.399732473075 2027.8800255417605 1649.9270089749416 1562.4024303742942 1987.8716038850812 1825.152845124934 1489.9285300876275 0.8660426792218586 0.8472512086813304 1.2909829301428126 1.0561176206493958 0.9593746972473957 1.3610585907919317 1.1073866804053374 1.0486425347411827 1.3342060130684041 1.2249935538972403 1.0 10.541027412825281 -5.744576134896008 24.772430361693154 1.1503162886983853 0.8566466452251331 0.43959421573696134 0.12929027716736666 173.55633021959977 254952.75513058298 0.02007174730701577 0.07730200236883863 1.8006274440380822e-06 5.744576134896008 -0.2936696434732522 LGEAS(ph)DSELADADK ddPTM_A549_MK2206_60min_R1 2 LGEASDSELADADK 14 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.999)DS(0.001)ELADADK;LGEAS(0.989)DS(0.011)ELADADK 126.63 1.7617999999999998e-07 128511000.0 5571.4 6966.9 5686.6 5448.700000000001 7605.299999999999 5667.1 5476.8 5565.6 8158.4 7424.9 8383.8 True False 6511.716112347833 7321.485451964126 6493.0453887633585 6783.631744601435 6486.570444679987 6266.788760483475 6471.863667152519 6354.540843935153 6310.535426287699 5747.609933182998 6301.871078891157 1.0332988458236754 1.1617954985604648 1.0303361188254965 1.0764472423633022 1.0293086550766648 0.9944330314015477 1.0269749390511609 1.008357797927733 1.0013748849013373 0.9120481617650479 1.0 12.621564525252564 -6.722214142627758 1.1141995988643019 1.0021436501171161 1.0897636001608104 0.4428673266242309 0.043073908543443507 0.26651887147099773 0.6389308973265302 0.004636375861828895 0.014712184042440282 1.8957709209128818e-07 6.722214142627758 0.08761995004369427 LGEAS(ph)DSELADADK ddPTM_A549_PD325901_60min_R1 2 LGEASDSELADADK 14 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.97)DS(0.03)ELADADK;LGEAS(0.97)DS(0.03)ELADADK 308.96 8.228499999999997e-136 174688000.0 47237.0 47063.0 50131.0 41340.0 54998.0 44878.0 44402.0 44845.0 47005.0 46442.0 51593.0 True False 52032.46546595854 51029.164177612874 53533.19112219219 43893.477910047994 51135.13021279983 44512.52844725346 46091.742407706675 43950.53129477807 45029.54331429065 43509.64419415868 45247.38807497348 1.1499551174035152 1.1277814333295697 1.183122239752036 0.9700776061884036 1.1301233593433182 0.98375907076664 1.0186608414022513 0.9713385272527431 0.9951854732405355 0.9615946034733449 1.0 15.465546893954317 -6.452200316677896 0.8069262286204786 0.9958243021615102 1.1671004428224498 0.6188427728573958 0.04964839470736508 0.37181736910712593 0.3921819268969188 0.007174949327322657 0.039587975822389675 3.5302030296199793e-07 6.452200316677896 0.17127614066093966 LGEAS(ph)DSELADADKASVASEVSTTSSTSKPPTGR ddPTM_A549_MK2206_60min_R1 1 LGEASDSELADADKASVASEVSTTSSTSKPPTGR 34 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.991)DS(0.009)ELADADKASVASEVSTTSSTSKPPTGR 114.72 2.0828e-21 36459000.0 2200.1 2587.9 2578.2 2088.2 3603.9 2246.6 1750.9 1988.7 3733.2 3506.2 3773.6 True False 2571.423092719328 2719.613056185386 2943.8275281028523 2599.809093742859 3073.7710840574605 2484.3337208276143 2069.0158659833023 2270.604315138322 2887.636160695387 2714.146984838344 2836.510973938268 0.906544383697241 0.9587881313250911 1.0378339992866603 0.9165517488314995 1.0836450527775594 0.8758413923491071 0.7294228314268215 0.8004919903362017 1.0180239693154214 0.9568610908879963 1.0 11.469901730202979 LGEAS(ph)DSELADADKASVASEVSTTSSTSKPPTGR ddPTM_A549_PD325901_60min_R1 1 LGEASDSELADADKASVASEVSTTSSTSKPPTGR 34 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.569)DS(0.431)ELADADKASVASEVSTTSSTSKPPTGR 86.366 1.4151e-07 78967000.0 3841.6 3712.5 3405.0 4248.6 3725.2 4123.0 4312.3 4722.8 4752.7 4475.7 4136.5 True False 4231.596403963549 4025.3654040198817 3636.0837759283563 4511.026372729318 3463.5548032423326 4089.4236549762954 4476.406936281104 4628.600049035076 4552.960546959457 4193.103538172258 3627.7367234339513 1.1664563132789842 1.1096079211088787 1.0023008980890167 1.243482291200906 0.9547426032514821 1.1272658317677804 1.2339393063904087 1.2758919408720832 1.2550416124601527 1.1558456023245094 1.0 11.824854043290774 -7.513276985424997 24.71147067082798 1.146898692022492 1.0933584861960755 0.10236274489816932 0.10145300372220069 1239.7555587984193 3190690.096824198 0.019104990744618855 0.029262902461410268 3.067065243897428e-08 7.513276985424997 -0.0535402058264165 LGELTMQLHPVADS(ph)SPAGAK ddPTM_A549_MK2206_60min_R1 1 LGELTMQLHPVADSSPAGAK 20 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038 H0YIS7 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.593)S(0.407)PAGAK 121.47 5.8446e-15 4904200.0 1702.8 1867.9 1575.3 1721.1 2059.7 1969.6 1412.6 1494.3 2800.0 2321.0 2555.1 True False 1990.1910105370087 1962.9681315540313 1798.7012276085743 2142.7695772631137 1756.7208584680916 2178.0217646853316 1669.2511350094314 1706.1216011018232 2165.8044706812066 1796.684487995492 1920.5981528274515 1.036234991482786 1.0220608244698164 0.9365317908697226 1.1156782453990115 0.9146738248612265 1.1340330414662267 0.8691308655858104 0.8883282526280254 1.1276718492584037 0.9354817327874979 1.0 10.907339979840087 -8.781375910029457 24.99805034204612 1.060289468237637 0.9914040987240933 0.0 0.09388717314628608 399.31088804833365 500686.7056299456 0.015351740057498125 0.016353756132990786 1.654337407296916e-09 8.781375910029457 -0.06888536951354363 LGELTMQLHPVADS(ph)SPAGAK ddPTM_A549_PD325901_60min_R1 2 LGELTMQLHPVADSSPAGAK 20 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038 H0YIS7 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.61)S(0.39)PAGAK;LGELTMQLHPVADS(0.5)S(0.5)PAGAK 134.66 1.6435e-17 11580900.0 4639.299999999999 4643.9 4698.4 5264.3 4955.1 5912.3 5489.799999999999 5470.1 5729.1 5503.9 5178.200000000001 True False 5110.278320727846 5035.257750768465 5017.261677774383 5589.46385490725 4607.070870166995 5864.152189016818 5698.717343133827 5360.994564289563 5488.325850481918 5156.3828146985525 4541.314227314321 1.1252862200090488 1.1087666474350655 1.1048039018303148 1.2308031497333298 1.0144796505067126 1.2912896786014314 1.2548608305626938 1.180494080776258 1.208532503096058 1.1354384560497535 1.0 12.148894149326544 -10.790832298840199 1.0205729242196975 0.9992983404378177 1.170749204489575 0.10849461587080977 0.08410188523789039 0.42520430364662 0.7809984075845211 0.05267538295155672 0.01300042104424005 1.6187049737363268e-11 10.790832298840199 0.17145086405175736 LGELTMQLHPVADS(ph)SPAGAQIK ddPTM_A549_MK2206_60min_R1 4 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.551)S(0.449)PAGAQIK;LGELTMQLHPVADS(0.5)S(0.5)PAGAQIK;LGELTMQLHPVADS(0.606)S(0.394)PAGAQIK;LGELTMQLHPVADS(0.588)S(0.412)PAGAQIK 145.2 2.0999e-27 25086500.0 8459.0 8904.6 9403.6 8468.9 13588.3 9677.1 8616.199999999999 10366.8 12844.099999999999 12035.800000000001 13051.0 True False 9886.67239730594 9357.806105378246 10737.171880873475 10543.780880183367 11589.479070312158 10701.124298860908 10181.652010100706 11836.325646993488 9934.931857813028 9316.904420773866 9810.076510724075 1.0078078786131925 0.9538973620795494 1.094504397507596 1.0747908916568825 1.1813851867151999 1.0908298510376313 1.037876921649942 1.2065477403824914 1.0127272551801676 0.9497280077875959 1.0 13.260048673014017 -8.960692943022584 24.999865122775894 1.0056147778449966 1.0811087690613137 0.25598247313282807 0.06920573109704944 180.19872423692692 114609.66475313298 0.011816245524965324 0.012559563829619069 1.0947300940639834e-09 8.960692943022584 0.07549399121631706 LGELTMQLHPVADS(ph)SPAGAQIK ddPTM_A549_PD325901_60min_R1 1 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELT(0.001)MQLHPVADS(0.534)S(0.465)PAGAQIK 55.049 0.0015432 10119000.0 3025.0 3329.4 3170.5 3664.6 4793.7 3827.3 3969.7 4157.8 3859.0 3470.8 4381.6 True False 3332.0957731127005 3609.9802225303165 3385.6691957653034 3890.9540190895464 4457.007049367221 3796.1317377372693 4120.769105803189 4074.869417268999 3696.81965003399 3251.6530956695656 3842.6909772508625 0.8671256140134765 0.9394406794357865 0.8810672562037446 1.0125596989516998 1.1598661135525012 0.9878836888552244 1.0723654673765282 1.0604207940197787 0.9620392771418659 0.8461916700873675 1.0 11.907901246617449 -6.266427784499983 24.46660434294203 1.008509472330285 0.9002341302559462 0.3239270455943878 0.07489549735271502 242.32855246858986 1188553.2243334316 0.008756927387521882 0.020957322940240112 5.414672768398476e-07 6.266427784499983 -0.10827534207433875 LGELTMQLHPVADSS(ph)PAGAK ddPTM_A549_MK2206_60min_R1 1 LGELTMQLHPVADSSPAGAK 20 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038 H0YIS7 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.18)S(0.82)PAGAK 128.98 3.2255e-17 3834000.0 1213.6 1797.6 1736.9 1520.9 2206.4 1715.8 1478.9 1812.6 2605.2 2292.6 2343.0 True False 1418.4260103287024 1889.0901618296093 1983.2185375695622 1893.5205682757946 1881.8414828004056 1897.364817144137 1747.5969868083298 2069.5416008546895 2015.1263596495291 1774.7000677201488 1761.168436489656 0.8053891842144841 1.0726345775279313 1.1260811268696675 1.0751501838460957 1.0685187423363514 1.077332967042009 0.9922940648945671 1.1750957818547327 1.1441985433636659 1.007683325995476 1.0 10.782317178423881 -5.261778177457975 7.587782968628359 1.0762052624052394 0.8025981884396077 0.6550354446232285 0.05599975454066638 0.050435156392845286 29.132929390489764 0.008590722837492641 0.07067292958692312 5.47295431019866e-06 5.261778177457975 -0.27360707396563166 LGELTMQLHPVADSS(ph)PAGAK ddPTM_A549_PD325901_60min_R1 2 LGELTMQLHPVADSSPAGAK 20 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038 H0YIS7 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.216)S(0.784)PAGAK;LGELTMQLHPVADS(0.242)S(0.758)PAGAK 144.63 1.956e-21 13486400.0 5849.1 5250.2 5612.0 6347.0 6951.0 6615.4 6218.299999999999 6304.5 6886.0 6141.8 6925.2 True False 6442.896326120158 5692.652779578499 5992.864067697483 6739.039774917146 6462.785739648193 6561.526375728882 6454.940809284323 6178.751801715432 6596.605366710044 5754.005699833854 6073.44430245976 1.0608307255753986 0.9373022120698398 0.9867323662242786 1.109591105032085 1.06410554173202 1.0803633076986394 1.06281386439488 1.0173390079848137 1.0861391062791836 0.9474040450990004 1.0 12.56829919798129 -6.1968354166710435 24.943769454996012 1.0496029767648525 0.9891896770270332 0.16329750664273468 0.05048973410960991 211.59858787271858 81698.01791205374 0.006184370296356951 0.016362301961259467 6.355717470127459e-07 6.1968354166710435 -0.06041329973781928 LGELTMQLHPVADSS(ph)PAGAQIK ddPTM_A549_MK2206_60min_R1 1 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.24)S(0.76)PAGAQIK 103.14 1.7409000000000002e-10 6953000.0 2102.6 2231.0 2130.2 2259.5 3082.3 2778.6 2271.5 2763.8 3368.7 3292.6 3803.7 True False 2457.467476365465 2344.548370628538 2432.294391577339 2813.0776014328103 2628.89775309812 3072.629607714596 2684.2021472277515 3155.577113782518 2605.694828708492 2548.799373189985 2859.136313220532 0.8595139255873298 0.8200197940152207 0.8507094888517581 0.9838906904946266 0.9194726886375448 1.0746705547080353 0.9388157307562106 1.1036819403087763 0.9113573272669314 0.8914578019258609 1.0 11.481363688723164 -6.234545137291591 6.062397984598621 0.9733127108347903 0.8399272681514285 0.47406611049890446 0.06295094623191312 0.11910343598728053 15.171937318821978 0.008261400647349412 0.021640400849094188 5.827132088348255e-07 6.234545137291591 -0.13338544268336183 LGELTMQLHPVADSS(ph)PAGAQIK ddPTM_A549_PD325901_60min_R1 5 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.253)S(0.747)PAGAQIK;LGELTMQLHPVADS(0.188)S(0.812)PAGAQIK;LGELTMQLHPVADS(0.324)S(0.676)PAGAQIK;LGELTMQLHPVADS(0.133)S(0.867)PAGAQIK;LGELTMQLHPVADS(0.139)S(0.861)PAGAQIK 165.66 7.058599999999999e-34 66968300.0 16846.7 17433.4 18449.1 17686.100000000002 22082.0 20241.4 20291.9 21350.6 21113.8 20742.9 21790.5 True False 18556.964582114935 18902.57380052263 19701.166869450753 18778.530228952586 20531.036498764428 20076.56074941478 21064.119358653756 20924.745533778325 20226.460411217307 19433.18975399455 19110.40664136044 0.9710397549548895 0.9891246248843287 1.0309130119090055 0.9826337336177045 1.0743380234688116 1.05055643902225 1.1022329223002987 1.0949398370462264 1.058400315116341 1.0168904366448965 1.0 14.222070856621096 -5.8514571771622315 1.0817765137562543 1.0421329352494977 0.9668782802550099 0.3695129887388179 0.034644008188551415 0.8986707718790379 1.4670414215745253 0.00623380141839668 0.06066568154558321 1.4078060357380845e-06 5.8514571771622315 -0.0752546549944878 LGENEKDEETYETFDPPLHS(ph)TAIYADEEEFSK ddPTM_A549_MK2206_60min_R1 1 LGENEKDEETYETFDPPLHSTAIYADEEEFSK 32 1 Q09GN1;Q71F23-3;Q71F23;D6R9S4 Q09GN1 MLF1IP;CENPU Centromere protein U 1 LGENEKDEETYET(0.001)FDPPLHS(0.499)T(0.499)AIY(0.001)ADEEEFSK 88.161 2.7334e-09 3286800.0 1425.8 1160.2 1594.6 1174.0 2004.3 1254.7 1091.8 1320.3 1759.8 1914.3 1928.0 True False 1666.440182536803 1219.2492243851327 1820.7382578204977 1461.6300527028625 1709.470125080155 1387.4715211975463 1290.1659275118907 1507.4565682491707 1361.2081098231386 1481.85830046091 1449.2243899069804 1.149884168485299 0.8413115545642944 1.2563535850630856 1.0085602083999416 1.1795758731260924 0.9573890219213066 0.8902458007863786 1.0401816162822983 0.9392666306909925 1.0225181902686749 1.0 10.501065275790706 -7.3015163717963105 24.88485511735599 0.9687640742002637 1.0785156762119035 0.2135714067787532 0.10626843445442075 548.3251661069379 340468.2958881498 0.014230717673070787 0.022749557347530338 4.994403522235983e-08 7.3015163717963105 0.1097516020116398 LGENEKDEETYETFDPPLHS(ph)TAIYADEEEFSK ddPTM_A549_PD325901_60min_R1 1 LGENEKDEETYETFDPPLHSTAIYADEEEFSK 32 1 Q09GN1;Q71F23-3;Q71F23;D6R9S4 Q09GN1 MLF1IP;CENPU Centromere protein U 1 LGENEKDEETY(0.001)ET(0.006)FDPPLHS(0.495)T(0.495)AIY(0.003)ADEEEFSK 68.453 0.00023705 2925900.0 801.88 515.56 603.78 659.1 782.92 613.62 804.76 877.54 1001.8 748.72 943.27 True False 883.2862672871444 559.0080505579775 644.7561416240887 699.8111100752939 727.9304001273721 608.6228821650626 835.3855821815691 860.0367762831879 959.6978298533427 701.4456914226453 827.2537698811898 1.0677331424116714 0.6757395020856324 0.7793934160211669 0.8459449029477385 0.8799360324848292 0.7357148487246822 1.0098298884773258 1.0396287180494885 1.1601008841472846 0.8479208157895575 1.0 9.692186150838383 -7.911516504392472 4.933266791518274 1.0730261075587926 0.8248603621064856 0.31463079273105865 0.12058602482974635 0.11538045926710466 4.871735405826805 0.016045432519040892 0.02231998516598175 1.2259803111471976e-08 7.911516504392472 -0.24816574545230696 LGETYKDHENIVIAK ddPTM_A549_MK2206_60min_R1 1 LGETYKDHENIVIAK 15 1 H7BZ94;P07237;H0Y3Z3 H7BZ94 P4HB Protein disulfide-isomerase 0 92.46799999999999 9.6213e-05 4956100.0 1325.0 1383.6 1880.5 1993.1 1844.1 1407.4 1868.6 1583.4 2581.6 1902.1 2342.6 False True 1548.6276068601935 1454.019330166582 2147.183176866578 2481.40958947366 1572.835332864498 1556.3301338434892 2208.1004324498244 1807.8517989591278 1996.8717219680736 1472.4142889341783 1760.8677675290946 0.8794684276794258 0.8257402156931454 1.2193892218718805 1.4091970079931968 0.8932160391984176 0.8838427067282746 1.2539842418424756 1.0266823166943209 1.134027073918303 0.8361867461520501 1.0 10.782070858628014 -5.743223703977247 24.927282562915416 1.0823057397915339 0.8526041403297818 0.2051152842882702 0.1664678678406377 243.4779863870799 333182.3854076102 0.020388746511083435 0.07864504948949848 1.8062434949425268e-06 5.743223703977247 -0.22970159946175206 LGETYKDHENIVIAK ddPTM_A549_PD325901_60min_R1 2 LGETYKDHENIVIAK 15 1 H7BZ94;P07237;H0Y3Z3 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 103.21 2.2189e-05 17581700.0 4072.3 5260.200000000001 3484.1000000000004 4952.8 6651.4 5593.200000000001 4391.0 4751.9 6660.9 5681.5 6280.2 False True 4485.716898131189 5703.495514673506 3720.5519775952966 5258.723207375081 6184.228610084309 5547.650833619554 4558.101907847397 4657.1196267065625 6380.965536903704 5322.769120389143 5507.775213467883 0.8144335460827256 1.0355352739754224 0.6755090455575637 0.9547817410042793 1.1228179020382547 1.0072398779191578 0.8275758779519001 0.8455536847834212 1.1585377560980799 0.9664100138607047 1.0 12.4272539652256 -7.243124659091625 0.459820069249895 1.063901557708711 0.8529732216198408 0.03921803842330207 0.1342030068947775 1.5925370906945604 0.604269519896353 0.03979036953396511 0.1379617973371189 5.713146240321119e-08 7.243124659091625 -0.21092833608887018 LGFLS(ph)ER ddPTM_A549_PD325901_60min_R1 1 LGFLSER 7 0 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 LGFLS(1)ER 63.48 0.026497000000000003 2266200.0 386.28 373.75 414.79 314.1 610.34 483.67 623.57 499.78 463.26 479.03 557.64 True False 425.49486123569346 405.24722417573884 442.94014373489625 333.50124362714257 567.4718239586936 479.7311518802774 647.300297580597 489.8114958301745 443.79079323004567 448.783964048229 489.0538151712094 0.8700368917206688 0.8286352372772487 0.9057083903533816 0.6819315856075869 1.1603463797946885 0.9809373467669028 1.323576828357812 1.0015492786999318 0.9074477684519894 0.9176576281101444 1.0 8.93384941693343 -6.758731643572878 24.999951021032516 1.0007567806294237 0.8280914513016039 0.38919615070533353 0.1260716252294296 72.67176547076129 670949.4088738085 0.01873740049031617 0.037660158152389364 1.7428834919825606e-07 6.758731643572878 -0.17266532932781986 LGFSLT(ph)PSK ddPTM_A549_MK2206_60min_R1 2 LGFSLTPSK 9 0 P38432 P38432 COIL Coilin 1 LGFS(0.033)LT(0.886)PS(0.081)K;LGFS(0.006)LT(0.977)PS(0.017)K 96.95700000000001 0.00092894 167632000.0 5887.3 6994.8 6000.7 5613.799999999999 7757.799999999999 6547.9 6048.7 6388.2 8903.2 8283.7 8801.2 True False 6880.932309334352 7350.805442793591 6851.6894918496555 6989.181252013054 6616.637896695514 7240.794431855757 7147.67049435901 7293.746913042005 6886.6394154889 6412.40641672049 6615.619139237199 1.0401040574605604 1.1111288736674707 1.0356837882659122 1.0564666896496897 1.0001539927612024 1.0944998917653295 1.0804235165180864 1.1025040528380532 1.0409667289708806 0.969282886720087 1.0 12.691660465702439 -9.642753779240683 1.1148011800920397 1.0079937056192516 1.063907358555773 0.41514877990561383 0.03364714942731851 0.33998958649633765 0.8709086285655562 0.008923846255586235 0.006183124944315981 2.276387649885204e-10 9.642753779240683 0.055913652936521396 LGFSLT(ph)PSK ddPTM_A549_PD325901_60min_R1 2 LGFSLTPSK 9 0 P38432 P38432 COIL Coilin 1 LGFS(0.065)LT(0.898)PS(0.037)K;LGFS(0.08)LT(0.92)PSK 141.71 4.1278e-05 400990000.0 14671.3 14311.1 15704.800000000001 14380.6 17913.3 15381.6 15692.1 15726.1 15960.300000000001 14850.900000000001 17387.7 True False 16160.71957555979 15517.146621809821 16770.622168634265 15268.857001287772 16655.131605530136 15256.337349353222 16289.271452546598 15412.430598613208 15289.544094438319 13913.211639529558 15249.123129711717 1.0597802534672893 1.0175763215903137 1.0997761658805172 1.0012940987759227 1.0922025787226364 1.0004730907856234 1.0682103694741787 1.0107093022669151 1.0026507074789006 0.9123942092395305 1.0 13.896438665320844 -8.411701146347344 5.387673887537338 1.0014975728929056 1.0471906392954637 0.34823107937293263 0.041023433073568545 0.1788989674013221 7.431016591674125 0.004422819675045978 0.005346425547115908 3.875242225453444e-09 8.411701146347344 0.0456930664025581 LGFSLT(ph)PSKGK ddPTM_A549_MK2206_60min_R1 2 LGFSLTPSKGK 11 1 P38432 P38432 COIL Coilin 1 LGFS(0.031)LT(0.94)PS(0.029)KGK;LGFS(0.038)LT(0.763)PS(0.2)KGK 76.262 0.00049348 40216000.0 6437.9 6717.3 7625.5 6881.099999999999 9965.9 6791.700000000001 7003.0 5546.3 10080.0 10675.400000000001 11571.3 True False 7524.460128456786 7059.181878091925 8706.910563784155 8566.969808904318 8499.929311747903 7510.3931860344155 8275.354451699737 6332.505009831384 7796.896094452347 8263.8197256127 8697.82685836652 0.8650965638869828 0.8116029432457181 1.0010443649391454 0.9849552018460417 0.9772474722892124 0.8634792699753616 0.9514278205871157 0.7280559975438106 0.8964188666221197 0.9501016587452137 1.0 13.086439275015898 -10.510708318534238 1.0652447619294483 0.9945123635220099 0.9003231431444153 0.11556318143029043 0.0786680539275096 0.6488513692705135 1.4133459714922287 0.0394611497991019 0.014138521520939609 3.0852593807721065e-11 10.510708318534238 -0.09418922037759458 LGFSLT(ph)PSKGK ddPTM_A549_PD325901_60min_R1 2 LGFSLTPSKGK 11 1 P38432 P38432 COIL Coilin 1 LGFS(0.009)LT(0.519)PS(0.472)KGK;LGFS(0.121)LT(0.728)PS(0.151)KGK 79.875 0.00036614 69808000.0 9053.0 9479.7 10466.5 11012.8 11094.900000000001 13539.5 13028.3 12948.2 12112.0 10932.6 12011.0 True False 9972.053895533638 10278.587588010047 11176.819630177419 11693.035644116508 10315.632499327114 13429.238801006919 13524.099085859318 12689.937993333604 11602.974760614588 10242.313770230814 10533.72314400222 0.9466789433526748 0.975779166349417 1.0610512045345875 1.110057240376057 0.9792959581627807 1.274880554332147 1.2838859443120814 1.2046963661237962 1.1015074729034613 0.9723355769097338 1.0 13.362727826551534 -5.765227842013752 2.381319644485313 1.0917721341537188 0.9476674071741571 0.22465231261881624 0.10402041843982171 0.43117289219713206 4.685338854203293 0.016109462381307994 0.08325091106137585 1.7170073647676552e-06 5.765227842013752 -0.14410472697956167 LGFSS(ph)SPTKK ddPTM_A549_MK2206_60min_R1 1 LGFSSSPTKK 10 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFS(0.002)S(0.608)S(0.387)PT(0.003)KK 126.34 3.0677e-06 331110000.0 15642.0 15453.0 14264.0 12885.0 19609.0 15191.0 13664.0 14701.0 19864.0 21214.0 19841.0 True False 18281.987189816715 16239.491694900404 16286.849686160527 16041.825578429634 16724.542075885223 16798.501537030308 16146.57193031917 16784.911769924303 15364.835716289812 16421.742666237133 14913.932116257476 1.2258328016585087 1.0888806230516466 1.0920560425782313 1.0756268335794996 1.121403929259811 1.126363014534476 1.082650222922633 1.1254518016497672 1.0302337168036866 1.1011008054901907 1.0 13.864373059486388 -8.8488488782017 3.86262549578634 1.0127726903050327 1.1135431692285458 0.2667430054608595 0.0472565204008225 0.11270882956811465 3.1176357655661016 0.006721876960868486 0.0071279730443801126 1.4162865205760185e-09 8.8488488782017 0.1007704789235131 LGFSSPYEGVLNKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LGFSSPYEGVLNKSPK 16 1 Q13459-2;Q13459;M0R0P8;M0R240;M0QXP0 Q13459-2 MYO9B Unconventional myosin-IXb 1 LGFSSPYEGVLNKS(1)PK;LGFSSPYEGVLNKS(1)PK 128.38 1.5436000000000002e-10 48236000.0 5911.2 5627.4 5934.700000000001 5640.9 7035.900000000001 5618.1 5569.3 5432.200000000001 8140.4 7226.4 8404.099999999999 True False 6908.866045035456 5913.810623431209 6776.329699415095 7022.920753229624 6000.928430400372 6212.603613007042 6581.16971981313 6202.230985414792 6296.612397547607 5593.951221047232 6317.130028639659 1.0936716536960729 0.9361546456413053 1.072691185505694 1.1117264836072958 0.9499453712673731 0.9834534962619528 1.0417974127454093 0.9818115120784351 0.9967520644661368 0.8855209874873895 1.0 12.62505355289797 -6.77501725414529 24.98848256797768 0.9965312162523133 1.0465412858789394 0.2492925662609281 0.05743117749340959 263.75850385219627 485416.9663927026 0.00635412752865985 0.012057246677317852 1.6787373220113898e-07 6.77501725414529 0.05001006962662602 LGFSSPYEGVLNKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LGFSSPYEGVLNKSPK 16 1 Q13459-2;Q13459;M0R0P8;M0R240;M0QXP0 Q13459-2 MYO9B Unconventional myosin-IXb 1 LGFSSPYEGVLNKS(1)PK;LGFSSPYEGVLNKS(1)PK 158.73 7.0009e-21 85105000.0 30928.0 27782.0 30740.0 31431.0 37450.0 36530.0 34441.0 40009.0 38601.0 40976.0 43004.0 True False 34067.78779200975 30123.286640937487 32826.2012546366 33372.421485019804 34819.64119548625 36232.51179148291 35751.67110183834 39210.98910854668 36978.73420859341 38388.76836699209 37714.78062481653 0.903300701412352 0.79871302820508 0.8703802782571877 0.8848632003724441 0.9232359467199112 0.9606979330443651 0.9479485366093725 1.039671674047751 0.9804838738545174 1.0178706525932188 1.0 15.202842413788641 -7.021978222155134 0.9783641877509714 0.9934276341990661 0.8479050225260085 0.7994474586250988 0.030550141156294158 0.15786575203710917 0.293921912074616 0.004578268257873959 0.012477487184387622 9.506524632529581e-08 7.021978222155134 -0.14552261167305758 LGFSSS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 LGFSSSPTK 9 0 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFSS(0.069)S(0.925)PT(0.006)K 128.81 5.0866000000000004e-05 33199000.0 5856.2 6106.9 6186.4 5818.0 8585.4 6275.7 5946.7 6575.1 9184.9 7629.5 8423.2 True False 6844.583389656348 6417.71512532112 7063.724544199634 7243.410261179948 7322.499033010607 6939.790408527493 7027.138414668397 7507.140560399249 7104.534815271365 5905.990651082127 6331.486971506474 1.081038849240148 1.0136189419962005 1.1156501744358696 1.14402987699057 1.1565212194171723 1.0960759201998773 1.109871732547592 1.185683646540466 1.1220957805399947 0.9327967786494383 1.0 12.628328646004386 -10.602276855073722 0.9352285062030578 1.0014297857048522 1.1139596931177544 0.5602747445252196 0.04783901783014338 0.3924655759045912 0.6242830215779753 0.028629570771805953 0.008251658849162409 2.498751943562203e-11 10.602276855073722 0.11252990741290225 LGFSSS(ph)PTK ddPTM_A549_PD325901_60min_R1 4 LGFSSSPTK 9 0 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFS(0.017)S(0.085)S(0.89)PT(0.009)K;LGFS(0.001)S(0.023)S(0.972)PT(0.004)K;LGFS(0.004)S(0.069)S(0.922)PT(0.006)K;LGFSS(0.065)S(0.929)PT(0.005)K 169.99 1.8899999999999999e-07 119716000.0 36148.8 35987.5 37504.8 39577.9 45320.3 45552.4 40393.4 45141.8 44312.4 41802.8 44164.2 True False 39818.59956465994 39020.292923142224 40050.101262683645 42022.53699506745 42137.158474547265 45181.43635725009 41930.592941116614 44241.411385942985 42450.103928521945 39163.3640738895 38732.28337993031 1.028046789136437 1.0074359040593293 1.0340237591940211 1.0849486094806904 1.0879079361580122 1.1665058812582554 1.082574774376549 1.1422360760911738 1.095987641940007 1.0111297516268447 1.0 15.241248934460716 -6.084883395778229 4.597229147274637 1.0695587740819372 1.0181579587424414 0.2104600154759002 0.047296653688090086 0.3605120270901698 13.352989078027221 0.00806144849036188 0.022741632039552016 8.224634444551969e-07 6.084883395778229 -0.05140081533949581 LGFSSS(ph)PTKK ddPTM_A549_MK2206_60min_R1 3 LGFSSSPTKK 10 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFSS(0.01)S(0.927)PT(0.063)KK;LGFSS(0.011)S(0.876)PT(0.113)KK;LGFSS(0.009)S(0.968)PT(0.022)KK 132.59 4.0854e-07 373682000.0 19491.1 20250.9 20599.9 17305.4 26183.6 19296.1 18709.5 19230.1 28102.6 27813.8 28543.6 True False 22780.721168356766 21281.58431141257 23521.275578374825 21545.22377686893 22332.027125205175 21338.000494285476 22108.77397030933 21956.025564711326 21737.405970630607 21530.643262476948 21455.436356716233 1.061769184723464 0.9918970631772194 1.0962851180144801 1.0041848330959062 1.0408563477300028 0.9945265218344536 1.0304509124275434 1.0233315789841018 1.0131421057687373 1.0035052610681197 1.0 14.389055622200367 -2.0000005596325567 0.10429565498869689 0.9856652362940439 1.1653574261316617 0.21195016221550644 0.027272526722590708 108.81625279664564 0.7735119128371202 0.13892715656721608 2.8171144696379398 0.009999987113992475 2.0000005596325567 0.1796921898376178 LGFSSS(ph)PTKK ddPTM_A549_PD325901_60min_R1 4 LGFSSSPTKK 10 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFS(0.002)S(0.022)S(0.911)PT(0.065)KK;LGFSS(0.042)S(0.855)PT(0.102)KK;LGFSS(0.014)S(0.925)PT(0.061)KK;LGFS(0.001)S(0.029)S(0.942)PT(0.029)KK 186.27 3.2049e-14 1123841000.0 46920.2 43912.799999999996 49507.6 44223.2 55248.4 48063.3 51199.1 51901.9 51048.8 48353.7 54382.4 True False 51683.50416317438 47613.48576798499 52867.483449383435 46954.76662582573 51367.94298063295 47671.88842013636 53147.509767722506 50866.67588824713 48903.396462983954 45300.63912990592 47693.70955843698 1.0836545247093619 0.9983179377072001 1.1084791671448255 0.9845064906996622 1.077038113751544 0.9995424734518945 1.1143505141407217 1.0665279836520676 1.0253636572987639 0.949824191687188 1.0 15.541511377702747 -9.100896375270455 2.277230260385372 1.0091508807899394 1.052342765339793 0.24939540108437352 0.045622579076687715 0.3300049303419388 3.5272539882626255 0.007502662830563123 0.007254271803866482 7.926904476294901e-10 9.100896375270455 0.043191884549853565 LGFVDVQNCIS(ph)R ddPTM_A549_MK2206_60min_R1 1 LGFVDVQNCISR 12 0 Q14573 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 1 LGFVDVQNCIS(1)R 86.46700000000001 0.00030916 3852600.0 1741.0 1914.9 1490.8 1627.8 1889.1 2027.1 1491.4 1348.8 2574.9 2084.8 2305.1 True False 2034.8382366366761 2012.3602308008012 1702.2178569915966 2026.6110730747196 1611.2158924756384 2241.6063765199233 1762.3680750057092 1539.9965305267597 1991.6892612703705 1613.8422320435175 1732.6800524764433 1.1743877548127661 1.1614147851039338 0.9824190303101208 1.1696395247225093 0.9298981021757585 1.2937220425179443 1.0171341630480677 0.888794517098359 1.1494847294073345 0.9314138693620463 1.0 10.758789563326335 -11.11340797792211 1.435314826325194 0.9996326751325715 1.089882917722739 0.1173915292178056 0.11751736229229208 0.935320009222138 3.4230962315610016 0.08106690800397172 0.017249761383223955 7.701796193999829e-12 11.11340797792211 0.09025024259016745 LGFVDVQNCIS(ph)R ddPTM_A549_PD325901_60min_R1 2 LGFVDVQNCISR 12 0 Q14573 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 1 LGFVDVQNCIS(1)R;LGFVDVQNCIS(1)R 80.905 0.00077923 10227600.0 4508.0 4191.3 4273.2 4955.0 5149.0 6712.5 4574.2 5064.4 4980.0 4851.0 5364.1 True False 4965.6488413858015 4544.515560368627 4563.205048839073 5261.05909637852 4787.352003085683 6657.835625522284 4748.273684098285 4963.3865690550565 4770.707918416497 4544.70703212316 4704.349705831515 1.055544156343305 0.9660241785884333 0.9699969887830663 1.1183392871190905 1.0176437345104845 1.4152509999988365 1.0093368862889427 1.0550632668533206 1.014105714229264 0.9660648795920802 1.0 12.199779594010748 -4.1428828359097425 16.097649426657707 1.0386346572483907 1.059270991625979 0.0 0.12335889834224147 0.0 0.0 0.015570371720814059 0.0 7.196430973395507e-05 4.1428828359097425 0.020636334377588383 LGGAVPFAPPEVS(ph)PEQAK ddPTM_A549_MK2206_60min_R1 7 LGGAVPFAPPEVSPEQAK 18 0 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 AAK1 Uncharacterized protein FLJ45252 1 LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK 156.17 1.4515e-22 62706400.0 8453.14 8656.019999999999 8259.28 7546.58 11709.38 8683.64 9129.630000000001 7845.71 13441.989999999998 11071.219999999998 12226.460000000001 True False 9879.823372569186 9096.574445149272 9430.570097862588 9395.492438778847 9986.945713321888 9602.53702106628 10788.365595155145 8957.86341897918 10397.40072744716 8570.223712703766 9190.292548870384 1.0750281691286916 0.9898024896136053 1.0261447116851288 1.0223278953109807 1.0866842007711086 1.0448565124563491 1.173887070274078 0.9747092784418736 1.1313460014638106 0.9325300219912115 1.0 13.165895071321868 -6.743509135132605 23.90050609986691 1.065347924242068 1.0254183326942021 0.0 0.0680091188418946 302.9352954875768 403799.2319262415 0.008693688693179038 0.01806252318555959 1.8050567684097677e-07 6.743509135132605 -0.039929591547865906 LGGAVPFAPPEVS(ph)PEQAK ddPTM_A549_PD325901_60min_R1 4 LGGAVPFAPPEVSPEQAK 18 0 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 AAK1 Uncharacterized protein FLJ45252 1 LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK 185.67 9.352499999999998e-40 101976100.0 7000.76 6255.37 6872.49 7248.97 7333.86 8590.9 7735.87 8805.590000000002 7932.540000000001 8270.029999999999 9560.65 True False 7711.4720015128805 6782.531983122927 7338.898499039603 7696.722413294651 6818.75497404349 8520.938558703821 8030.2627660804965 8629.955599598285 7599.162929950926 7747.858894427851 8384.750659953776 0.919702005969417 0.8089127820481091 0.8752673510126849 0.9179429091499165 0.8132328855776709 1.016242331379094 0.9577223094341564 1.0292441540111177 0.9063075621610458 0.9240416571278893 1.0 13.033552167199865 -7.262289686409182 24.999986850568582 0.9647943533475825 0.8670720470595817 0.5456437704018859 0.0475563696150495 51.952876130925 1527479.6384192803 0.007443361220427952 0.012322305935188531 5.4665120980873184e-08 7.262289686409182 -0.09772230628800072 LGGDEDGY(ph)EEEEDENSRQSEDDDSETEKPEADDPKDNTEAEK ddPTM_A549_MK2206_60min_R1 1 LGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEK 42 3 J3KS14;F5H478;J3KRU5;J3QLH3;Q9UHR5 J3KS14 SAP30BP SAP30-binding protein 1 LGGDEDGY(0.322)EEEEDENS(0.322)RQS(0.322)EDDDS(0.017)ET(0.017)EKPEADDPKDNTEAEK 41.287 0.0066003 7784300.0 551.87 369.21 605.41 524.23 595.13 492.81 448.51 807.24 920.4 1005.3 1213.9 True False 645.0121640739131 388.00121197658564 691.2662414819443 652.6663735335786 507.587165363944 544.958827099197 529.9984613925244 921.6687420688183 711.9308695767796 778.2020317888275 912.4551280643591 0.7068974070453334 0.4252277181012438 0.7575892997043758 0.7152859943021148 0.5562872625207514 0.5972445223199611 0.5808487947422019 1.0100976077848394 0.7802365811533521 0.8528660838803876 1.0 9.833609802779918 -9.099075796731883 0.3476603667259863 1.0161084308426311 0.5839956363085377 0.4383857135044412 0.13043202111649144 0.6934728855655432 0.2304749423600262 0.10927798658888092 0.07421308622663161 7.960204101047653e-10 9.099075796731883 -0.43211279453409346 LGGDEDGYEEEEDENSRQS(ph)EDDDS(ph)ETEKPEADDPKDNTEAEK ddPTM_A549_PD325901_60min_R1 1 LGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEK 42 3 J3KS14;F5H478;J3KRU5;J3QLH3;Q9UHR5 J3KS14 SAP30BP SAP30-binding protein 2 LGGDEDGY(0.002)EEEEDENS(0.046)RQS(0.952)EDDDS(0.829)ET(0.171)EKPEADDPKDNTEAEK 85.238 4.0323e-08 50841000.0 1274.4 1531.0 1269.8 1650.1 1530.3 972.25 1436.8 1693.0 1641.2 1158.3 2249.1 True False 1403.776149836305 1660.0227430449677 1355.9762639277026 1752.0229293509963 1422.817007248401 964.33231834846 1491.4782102471281 1659.2317868671935 1572.226071426739 1085.1647403232853 1972.4749582195805 0.7116826218688214 0.8415938241078396 0.687449165464514 0.8882358288251369 0.7213359040728616 0.48889458105916717 0.7561455743871063 0.841192827291896 0.797082905856448 0.5501538743502173 1.0 10.945791269117928 -10.07874898487893 0.5662636995200159 1.0065638288827248 0.7355956343295476 0.0 0.16469580339189627 0.6027916312988422 0.3667035494790572 0.0768828585830666 0.024919679402428535 8.341631780139823e-11 10.07874898487893 -0.2709681945531772 LGGKPS(ph)SPSLSPLMGFGSNK ddPTM_A549_PD325901_60min_R1 1 LGGKPSSPSLSPLMGFGSNK 20 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62;A0A087WYL6;Q8TEW8-6;Q8TEW8-3 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 LGGKPS(0.453)S(0.453)PS(0.076)LS(0.018)PLMGFGSNK 74.579 8.8029e-05 3282200.0 2246.3 2370.9 3018.5 3151.8 3387.1 3167.6 3436.2 3491.1 3146.1 3646.1 3373.0 True False 2474.3427223613394 2570.7040636742745 3223.353561715048 3346.4795277428484 3149.2017808606524 3141.804115814431 3566.96647136079 3421.4672717850294 3013.880357857459 3415.884623752683 2958.1423832086816 0.8364515299893823 0.8690264803568533 1.0896546359674184 1.1312773674243968 1.06458762726787 1.0620868466806295 1.2058129762813241 1.1566269734703511 1.0188422217149393 1.1547397593646223 1.0 11.5304757794944 -5.720406762283985 7.08062267603959 1.0514828002318384 0.8496829264283612 0.5773694463516049 0.07250903693332512 0.12926396103873197 16.871538376630735 0.010969231226538399 0.04236497174869388 1.9036768898642614e-06 5.720406762283985 -0.2017998738034772 LGGKPSS(ph)PSLSPLMGFGSNK ddPTM_A549_PD325901_60min_R1 1 LGGKPSSPSLSPLMGFGSNK 20 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62;A0A087WYL6;Q8TEW8-6;Q8TEW8-3 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 LGGKPS(0.177)S(0.745)PS(0.055)LS(0.023)PLMGFGSNK 51.827 0.002807 3542700.0 2890.8 2824.0 2992.6 3275.6 3599.0 3481.7 3283.4 3891.2 3838.5 3817.0 3634.8 True False 3184.2718879055174 3061.988390828863 3195.6958319656983 3477.9263725726464 3346.2186558759686 3453.346189553955 3408.3515837454224 3813.5869634126543 3677.1811937433195 3575.993968586706 3187.7426428956196 0.998911218570973 0.9605506886363554 1.0024949282175597 1.0910311032553857 1.0497141804510277 1.0833202602632537 1.0692053799705143 1.1963283710847317 1.1535376614980164 1.121795066034068 1.0 11.638319445105441 -6.170428381495167 3.8340354826329266 1.082777141351396 0.9799997416448166 0.46251998095959546 0.05087577975768467 0.22753543854171068 6.17027499064037 0.009352772194535118 0.026480112718348325 6.754164261822323e-07 6.170428381495167 -0.1027773997065794 LGGKS(ph)PPPPPPPPR ddPTM_A549_MK2206_60min_R1 1 LGGKSPPPPPPPPR 14 1 Q5T5P2;Q5T5P2-3;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-10 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 LGGKS(1)PPPPPPPPR 41.088 0.02732 3965000.0 1537.5 1750.3 1715.4 1738.4 2571.7 1884.0 1632.2 1524.5 2488.4 2686.7 2236.5 True False 1796.9924117339986 1839.3827938642446 1958.6695142764845 2164.3080780397418 2193.4063367103886 2083.3636295020156 1928.7496124609893 1740.602543585443 1924.781373158254 2079.7726040058114 1681.1153257401265 1.0689286952653627 1.0941443253183356 1.1651012183915237 1.287423917265691 1.30473281822276 1.2392746634349998 1.1473035686066566 1.0353855663168896 1.1449430884885017 1.2371385663801335 1.0 10.715202982565344 -10.088356050893458 0.4591870104473819 0.9866424981477128 1.1852279760476243 0.0 0.10425399840754263 1.0648078237218073 0.4080144390328318 0.09198804524322099 0.02604861130681363 8.159131808765547e-11 10.088356050893458 0.19858547789991154 LGGKS(ph)PPPPPPPPR ddPTM_A549_PD325901_60min_R1 1 LGGKSPPPPPPPPR 14 1 Q5T5P2;Q5T5P2-3;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-10 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 LGGKS(1)PPPPPPPPR 51.495 0.006610600000000001 6901400.0 2847.0 3095.0 2936.3 3122.7 3488.8 3884.2 3067.7 3928.3 3855.1 3820.3 3820.4 True False 3136.0253441493746 3355.8265119034454 3135.5749754062945 3315.582086833744 3243.7587237066086 3852.5683630024064 3184.44300220985 3849.9469748082656 3693.083553471375 3579.0856060235246 3350.515019510954 0.9359830730163726 1.001585276401258 0.935848655250609 0.9895738617872817 0.9681373474875729 1.1498436331632182 0.9504338836465374 1.149061249506116 1.102243545235748 1.0682195379461195 1.0 11.71016715903419 -7.092792473392143 24.999999501395486 1.0561177254217453 0.967752829152138 0.42806632840993597 0.058514450506173675 51.331149277251086 13826.609170686339 0.008939972107599984 0.015484489548882525 8.076208578061918e-08 7.092792473392143 -0.08836489626960731 LGGLAPQRGS(ph)R ddPTM_A549_MK2206_60min_R1 2 LGGLAPQRGSR 11 1 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 LGGLAPQRGS(1)R;LGGLAPQRGS(1)R 52.555 0.0062716000000000004 6509600.0 1715.77 1680.15 1818.92 1782.0900000000001 2391.17 2063.9900000000002 1581.44 1695.8200000000002 2734.2 2225.3 2869.0 True False 2005.3500294509536 1765.6624584991196 2076.87020689506 2218.7021300010606 2039.4320605637452 2282.4000518343214 1868.7671775090705 1936.2076782309398 2114.9080656201972 1722.6031844620297 2156.5481196281776 0.9298888400397516 0.8187447534458666 0.9630530327573422 1.0288210635353685 0.945692814364548 1.058358044998246 0.8665548245829428 0.8978272548654153 0.980691340188987 0.7987779956234101 1.0 11.074508192329409 -2.0000000000000004 0.3095612623078239 0.986429976583666 0.020461604327761746 0.0 0.08499083884455111 58.61833719402547 0.7329689658772551 0.019897587358770192 32.23066434540524 0.00999999999999999 2.0000000000000004 -0.9659683722559043 LGGLRPES(ph)PESLTSVSR ddPTM_A549_MK2206_60min_R1 7 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.866)PES(0.109)LT(0.013)S(0.009)VS(0.003)R;LGGLRPES(1)PESLTSVSR;LGGLRPES(0.982)PES(0.008)LT(0.004)S(0.005)VS(0.001)R;LGGLRPES(0.83)PES(0.159)LT(0.011)SVSR;LGGLRPES(0.994)PES(0.006)LTSVSR;LGGLRPES(0.984)PES(0.016)LTSVSR;LGGLRPES(0.967)PES(0.03)LT(0.001)S(0.002)VSR 357.3 3.247099999999998e-245 3690357800.0 31550.2 36738.7 33047.4 30440.399999999998 46415.700000000004 38207.3 35545.7 36019.2 53324.9 52610.100000000006 54078.49999999999 True False 36875.10243166827 38608.54290632483 37734.01825002954 37898.299366521496 39588.012016506 42250.37112604687 42003.89357900657 41125.031904173695 41246.89529236723 40725.44187069871 40649.31595932816 0.9071518563452285 0.949795636043538 0.9282817523370989 0.9323231762236982 0.9738912225759456 1.0393870137524739 1.0333235034270625 1.0117029262022887 1.0147008459782443 1.0018727476606673 1.0 15.310943454595426 -6.944408061013933 3.387237884297199 1.0117024597300646 0.9307891365880342 0.8793559110617671 0.015048634978627384 0.06551033383284932 1.5437213904867249 0.0023326732370834487 0.004550596876730641 1.1365588786912204e-07 6.944408061013933 -0.08091332314203037 LGGLRPES(ph)PESLTSVSR ddPTM_A549_PD325901_60min_R1 8 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.955)PES(0.044)LTSVSR;LGGLRPES(0.98)PES(0.02)LTSVSR;LGGLRPES(0.989)PES(0.01)LT(0.001)SVSR;LGGLRPES(1)PESLTSVSR;LGGLRPES(0.909)PES(0.087)LT(0.003)SVSR;LGGLRPES(0.963)PES(0.023)LT(0.008)S(0.006)VSR;LGGLRPES(0.916)PES(0.041)LT(0.021)S(0.021)VS(0.002)R;LGGLRPES(0.644)PES(0.08)LT(0.119)S(0.119)VS(0.039)R 388.46 1.1537999999999992e-302 5018519000.0 76641.6 69639.8 69635.0 70056.2 77130.5 79427.2 72386.69999999998 68821.20000000001 90611.0 84969.90000000001 99395.3 True False 84422.19881143594 75508.59034689929 74360.84984927197 74383.41236482604 71713.11976577975 78780.37121720416 75141.41548002195 67448.50717681293 86802.93477824048 79604.88601294607 87170.30821871985 0.9684742492777633 0.8662191506474886 0.8530525057074761 0.8533113382849343 0.8226782861182924 0.9037523536057207 0.8620069954494588 0.7737555201431345 0.9957855668061012 0.9132110192063184 1.0 16.411549190237785 -8.790502413572428 24.2070587076575 0.9980099176359906 0.8623590788599617 0.42986273907930983 0.05203342523330678 60.41471461187526 50320.04063699009 0.007504455985916693 0.007989866926775932 1.6199349911613497e-09 8.790502413572428 -0.1356508387760289 LGGPEGPGS(ph)PLLAT ddPTM_A549_MK2206_60min_R1 2 LGGPEGPGSPLLAT 14 0 Q9C086 Q9C086 INO80B INO80 complex subunit B 1 LGGPEGPGS(0.999)PLLAT(0.001);LGGPEGPGS(1)PLLAT 116.54 3.5962e-06 14348700.0 1740.05 1784.04 1782.62 1316.13 2358.8999999999996 2156.58 2067.99 2078.05 2823.6 2615.5 2943.3 True False 2033.727899861947 1874.8400157490526 2035.4223210560492 1638.5819090833204 2011.9089348159346 2384.7878641780544 2443.7170145038604 2372.61995126122 2184.0591083626614 2024.656733456359 2212.397379052499 0.9192416873739605 0.8474246233974423 0.9200075629848002 0.7406363452595817 0.909379550828058 1.0779202175693159 1.1045560972190394 1.0724203408147859 0.9871911479564425 0.9151415349820458 1.0 11.111394822720715 -7.054620822412488 6.477614212622423 1.0143098392600358 0.8563423826596083 0.5943475454790454 0.06596940686004325 0.11981054809030765 11.28523349949443 0.009133696147745559 0.01604153241118326 8.818184426908695e-08 7.054620822412488 -0.15796745660042755 LGGPEGPGS(ph)PLLAT ddPTM_A549_PD325901_60min_R1 2 LGGPEGPGSPLLAT 14 0 Q9C086 Q9C086 INO80B INO80 complex subunit B 1 LGGPEGPGS(1)PLLAT;LGGPEGPGS(1)PLLAT 81.92 0.00041435 24894000.0 3142.8 2806.6 3440.0 3417.7 4544.9 3470.2 3277.3 3261.3 4708.6 3157.2 3619.5 True False 3461.854742392921 3043.122031763556 3673.4590864004517 3628.8035668401317 4225.681903053815 3441.939841741141 3402.0194449073747 3196.2508130596448 4510.713916597572 2957.853853188876 3174.3244459009256 1.0905799962770943 0.9586676105819006 1.1572412174641031 1.1431734936629068 1.3312066787976038 1.0843062517398916 1.0717302225676637 1.0069074121226118 1.4209996468452857 0.9318057758741131 1.0 11.632233877413181 -5.863448213997366 6.484921151441728 1.1772743517541426 1.0257208791454357 0.0 0.14572181552126473 0.335483910521796 18.268471968794966 0.02279731059933031 0.07252621283119942 1.3694676762789172e-06 5.863448213997366 -0.15155347260870689 LGGS(ph)AVISLEGKPL ddPTM_A549_PD325901_60min_R1 1 LGGSAVISLEGKPL 14 1 P23528;G3V1A4;E9PK25 P23528 CFL1 Cofilin-1 1 LGGS(0.934)AVIS(0.066)LEGKPL 103.83 2.0444e-05 19649000.0 1597.5 2601.3 2236.1 2299.2 2451.0 2145.2 2033.2 2245.0 2466.0 2449.3 2674.6 True False 1759.677023982657 2820.5206802631456 2387.8551927616445 2441.216362137939 2278.850215490969 2127.7302024387923 2110.5745386097306 2200.221713831571 2362.362595746001 2294.650779999848 2345.641155686315 0.7501902069363163 1.2024519067742419 1.0179968009910612 1.0407458771858304 0.9715255080541918 0.9070996206221648 0.8997857722155264 0.9380043953005269 1.0071287289699662 0.9782616469007394 1.0 11.195766606421612 -5.217551226851794 23.460296712271788 0.9974422560782105 0.7501882629480779 0.4521661325352343 0.07786821039035129 10925.732853724341 5840034.37672891 0.010357728109452785 6.845051537609377 6.059667200006583e-06 5.217551226851794 -0.24725399313013252 LGGSAVISLEGKPL ddPTM_A549_MK2206_60min_R1 2 LGGSAVISLEGKPL 14 1 P23528;G3V1A4;E9PK25 P23528 CFL1 Cofilin-1 0 ; 143.97 1.4035e-12 10175400.0 5575.0 5524.6 5758.4 5588.7 6867.799999999999 6046.9 5634.6 6027.299999999999 9005.400000000001 8481.5 8202.9 False True 6515.923704336288 5805.778542525515 6575.027708411865 6957.931750886276 5857.555717719648 6686.778944392636 6658.3338845562375 6881.688232832105 6965.691278668768 6565.523259342426 6165.893541477164 1.0567687652251077 0.9415956508932238 1.0663544000853256 1.1284547331349746 0.9499930023631826 1.084478494383911 1.0798652036021206 1.116089369130343 1.1297131927126975 1.0648129448192716 1.0 12.59009426516964 LGGSAVISLEGKPL ddPTM_A549_PD325901_60min_R1 2 LGGSAVISLEGKPL 14 1 P23528;G3V1A4;E9PK25 P23528 CFL1 Cofilin-1 0 ; 180.97 1.7482999999999998e-25 18881000.0 9477.4 9989.400000000001 10113.3 10284.8 11184.0 11445.0 9572.1 10203.9 11225.8 12060.1 12462.3 False True 10439.538671106868 10831.241795802354 10799.64935421328 10920.068737524469 10398.474422705423 11351.79571457765 9936.371503554103 10000.375209695307 10754.018664771065 11298.623227810464 10929.51610502863 0.9551693387691405 0.9910083567944001 0.9881177950087288 0.9991356097183649 0.9514121506185552 1.0386366244846588 0.9091318781242671 0.9149879201965924 0.9839427986956514 1.0337715887176386 1.0 13.415941907885026 -9.091733792442664 4.553613380766195 0.9935071867446368 0.9696382399082496 0.1455220797436314 0.03735300986960308 0.37213893737232 15.350776044673655 0.00654275908320221 0.006468816494016815 8.095919991243408e-10 9.091733792442664 -0.023868946836387184 LGGT(ph)LAR ddPTM_A549_MK2206_60min_R1 4 LGGTLAR 7 0 Q9HBI1;Q9NVD7-2;Q9NVD7 Q9HBI1;Q9NVD7-2 PARVB;PARVA Beta-parvin;Alpha-parvin 1 LGGT(1)LAR;LGGT(1)LAR;LGGT(1)LAR;LGGT(1)LAR 104.06 0.010812 554510000.0 21530.0 23455.8 23404.0 21641.6 28859.5 24730.199999999997 21970.300000000003 23716.9 34467.9 34329.5 32560.0 True False 25163.737642037722 24649.600032177885 26723.039123310497 26943.792971528328 24614.305779948467 27347.133349421812 25962.019121830464 27078.84320496005 26660.97568392597 26574.44210712678 24474.4533897154 1.0281634176398797 1.0071563045627032 1.0918748091240311 1.1008945753554842 1.0057142191495003 1.1173746319872282 1.060780345465863 1.106412583512041 1.0893389633424617 1.0858032939070186 1.0 14.578989018714354 -3.792429763840052 16.607136532168926 1.0537267864038136 0.4507789281162846 0.0 0.043555466606960615 0.0 0.0 0.006260388602721213 0.0 0.00016127618297274207 3.792429763840052 -0.602947858287529 LGGT(ph)LAR ddPTM_A549_PD325901_60min_R1 3 LGGTLAR 7 0 Q9HBI1;Q9NVD7-2;Q9NVD7 Q9HBI1;Q9NVD7-2 PARVB;PARVA Beta-parvin;Alpha-parvin 1 LGGT(1)LAR;LGGT(1)LAR;LGGT(1)LAR 91.064 0.013193999999999999 949262100.0 11263.21 11844.2 13513.169999999998 13041.699999999999 14497.199999999999 13247.83 13475.8 14009.7 15806.7 14922.699999999999 15984.699999999999 True False 12406.642787663035 12842.352301223513 14430.254977492445 13847.256189150301 13478.966684624922 13139.94406478404 13988.628943240716 13730.265543102962 15142.399368279928 13980.47817527608 14018.683235361948 0.8850077128761593 0.9160883433637222 1.0293588017662252 0.9877715300835656 0.9615001964395915 0.9373165684804619 0.9978561258845323 0.9794261923593895 1.0801584652461096 0.9972747040899321 1.0 13.775063223974392 -8.401477808174795 2.2602515355420354 1.037273876405784 0.9590860443804945 0.28540022581880586 0.043263642263600674 0.25295451528219204 2.529906640663587 0.008229994992574896 0.010064540521680923 3.967548020150862e-09 8.401477808174795 -0.07818783202528956 LGGT(ph)LARR ddPTM_A549_MK2206_60min_R1 1 LGGTLARR 8 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 LGGT(1)LARR 55.549 0.012742 2221400.0 358.51 363.51 534.23 449.4 457.94 227.0 266.85 190.55 739.66 694.88 867.64 True False 419.01772327203633 382.01110632325407 609.9918471563053 559.5030201743325 390.57763262945 251.02098932959515 315.3331908376516 217.56104603490084 572.1281909943077 537.9061253848806 652.181042354198 0.6424868189352686 0.5857439599045946 0.9353106078557558 0.8578952527578496 0.5988791566519166 0.38489464278734165 0.4835056071231137 0.3335899572449454 0.8772536363968492 0.8247803760795995 1.0 9.349128695106597 -8.943239675858615 10.093230106717833 0.9460189145375233 0.6098455183899391 0.3677118292651569 0.17313489274645325 0.3033520164356526 51.99972791115161 0.032616627555637774 0.03460772246562825 1.1396206868905443e-09 8.943239675858615 -0.33617339614758424 LGHDPYRLT(ph)PDPYR ddPTM_A549_MK2206_60min_R1 4 LGHDPYRLTPDPYR 14 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6 P18583-5 SON Protein SON 1 LGHDPYRLT(0.999)PDPYR;LGHDPYRLT(1)PDPYR;LGHDPYRLT(1)PDPYR;LGHDPYRLT(1)PDPYR 85.619 6.4229e-05 49391500.0 3226.5200000000004 4202.16 3966.5299999999997 3062.88 5731.530000000001 3844.8900000000003 3812.3900000000003 3615.54 5464.25 5678.700000000001 6141.21 True False 3771.077695159662 4416.031995123451 4529.043598264609 3813.285737497906 4888.42952951188 4251.753707768578 4505.051914624527 4128.05386712687 4226.60609961421 4395.877725971565 4616.178068226479 0.8169263922283003 0.956642471294457 0.9811241098861364 0.8260698961647636 1.0589776774772468 0.9210549603867618 0.975926805257613 0.8942579350525044 0.9156072484955197 0.9522764635594848 1.0 12.172483161416782 LGHDPYRLT(ph)PDPYR ddPTM_A549_PD325901_60min_R1 4 LGHDPYRLTPDPYR 14 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6 P18583-5 SON Protein SON 1 LGHDPYRLT(1)PDPYR;LGHDPYRLT(0.998)PDPY(0.002)R;LGHDPYRLT(1)PDPYR;LGHDPYRLT(1)PDPYR 119.96 1.3703999999999998e-06 76005000.0 9246.09 8246.48 9621.720000000001 8750.87 9972.01 12357.880000000001 9571.46 8869.84 13100.85 9752.3 10518.89 True False 10184.7462501883 8941.439810624079 10274.707779302607 9291.39136523227 9271.610419166913 12257.241522522054 9935.707148003885 8692.924082945126 12550.266833933081 9136.538113662074 9225.13321473761 1.104021591137314 0.9692477715486734 1.113773377590716 1.0071823516205498 1.0050381065885372 1.3286790810717506 1.0770258723344068 0.9423087862902344 1.360442883782253 0.9903963336882766 1.0 13.171354029098392 LGHFT(ph)TVR ddPTM_A549_PD325901_60min_R1 2 LGHFTTVR 8 0 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;J3KT82;J3QLK5;Q9UKI8-3;J3KRK0;Q86UE8-3;Q86UE8-2;Q86UE8 B3KRP1;J3KRK0 TLK1;TLK2 Serine/threonine-protein kinase tousled-like 1;Serine/threonine-protein kinase tousled-like 2 1 LGHFT(0.973)T(0.027)VR;LGHFT(0.987)T(0.013)VR 80.23100000000001 0.0035141 6873800.0 670.42 473.14 585.72 518.5699999999999 441.31 712.22 683.97 526.29 606.29 736.03 588.94 True False 738.4805448628814 513.0131682849741 625.4704814204867 550.6008911420802 410.3139080368501 706.4199164557889 709.9988526327451 515.7927330834822 580.809739730269 689.556940188334 516.504113598257 1.429767015248363 0.9932412052075189 1.2109690222273526 1.0660145324037904 0.7944058860990932 1.367694656939849 1.3746238102277546 0.9986227011633673 1.124501672763113 1.3350463665903725 1.0 9.012636028979625 -10.240315951821634 0.6197104514283773 0.9963530142748293 1.148044011292419 0.0 0.20619891043890026 1.7715993613260757 1.2364196006349775 0.13506450831380018 0.039803308642424796 5.7502145359939345e-11 10.240315951821634 0.1516909970175898 LGHPEALSAGT(ph)GSPQPPSFTYAQQR ddPTM_A549_MK2206_60min_R1 1 LGHPEALSAGTGSPQPPSFTYAQQR 25 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 LGHPEALS(0.027)AGT(0.495)GS(0.478)PQPPSFTYAQQR 66.98 0.00017539 32454000.0 804.01 1892.8 1028.4 1319.4 1251.7 990.69 1020.9 956.38 1883.9 1415.2 2735.7 True False 939.7072318427655 1989.1354351975322 1174.2425839349062 1642.6530592301162 1067.576588116964 1095.5241582332008 1206.384315256355 1091.9497937909132 1457.1996579701167 1095.5053371009137 2056.3501885210203 0.4569782117308662 0.9673135666781393 0.5710324002642038 0.7988197090163687 0.5191608871273002 0.5327517483883082 0.5866628758032781 0.531013540342694 0.7086339992597137 0.5327425957000199 1.0 11.005870255527586 -10.082180429456315 0.7884006468612909 0.9826382880697365 0.6316455877766041 0.0 0.19311753415344304 0.3670138072322411 0.453695022237958 0.06599701836568767 0.027703409886603438 8.275982631249765e-11 10.082180429456315 -0.35099270029313245 LGHPEALSAGTGS(ph)PQPPSFTYAQQR ddPTM_A549_MK2206_60min_R1 1 LGHPEALSAGTGSPQPPSFTYAQQR 25 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 LGHPEALS(0.002)AGT(0.077)GS(0.92)PQPPSFTYAQQR 107.21 1.6052e-12 27152000.0 985.13 1590.6 1178.6 1196.0 1402.1 1230.1 978.67 1001.5 2180.4 1774.1 2036.9 True False 1151.3958598839106 1671.5547459980949 1345.7432024753796 1489.02005369048 1195.8529473506387 1360.2683655257053 1156.4816708903293 1143.4656919651172 1686.5428813833234 1373.3295778340382 1531.0815144198805 0.7520147353618655 1.0917477157520505 0.8789494156914796 0.9725282681991381 0.7810511302552965 0.888436280312028 0.7553364468178003 0.7468352802877193 1.101536962924111 0.8969669902613815 1.0 10.580335378289309 -8.774440154243965 24.996405971696472 1.0479480179153287 0.8656248956730607 0.2074182849474745 0.11182713662488684 168.2854310712169 323558.9418213158 0.018000526157358237 0.019220045268135515 1.6809695472620283e-09 8.774440154243965 -0.182323122242268 LGHPEALSAGTGS(ph)PQPPSFTYAQQR ddPTM_A549_PD325901_60min_R1 4 LGHPEALSAGTGSPQPPSFTYAQQR 25 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 LGHPEALSAGT(0.212)GS(0.788)PQPPSFTYAQQR;LGHPEALSAGT(0.019)GS(0.981)PQPPSFTYAQQR;LGHPEALS(0.002)AGT(0.212)GS(0.786)PQPPSFTYAQQR;LGHPEALS(0.001)AGT(0.031)GS(0.968)PQPPSFTYAQQR 151.95 3.1753e-33 134400000.0 11572.3 11957.899999999998 11092.599999999999 14042.9 18226.3 18237.7 12933.0 15267.2 25546.7 13726.3 17191.7 True False 12747.111376922998 12965.634199253693 11845.410541222578 14910.298039260126 16946.147565321513 18089.178217890167 13425.172392209146 14962.683719113295 24473.061040042317 12859.619075454986 15077.22988716535 0.8454544682491119 0.8599480339747837 0.7856489971878792 0.9889282149868043 1.1239563031235 1.1997680179492898 0.8904269877610254 0.9924027046805486 1.6231802010842369 0.8529165617088502 1.0 13.880083768689508 -7.031513179377667 0.690357649915733 1.2656591884316324 0.8088623077824005 0.02504875934174411 0.2236773612220509 0.7534827534811377 0.6599376466193101 0.04950571239842334 0.17025489686626777 9.300082917002477e-08 7.031513179377667 -0.45679688064923185 LGHSLS(ph)VSK ddPTM_A549_PD325901_60min_R1 2 LGHSLSVSK 9 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 LGHS(0.005)LS(0.994)VS(0.001)K;LGHS(0.017)LS(0.938)VS(0.046)K 78.342 0.0005658 5658100.0 1069.29 1411.93 1294.0700000000002 1454.8 1616.9 1353.3 1440.75 1638.42 1562.58 1789.58 1870.58 True False 1177.8435336303069 1530.9182962687669 1381.8933720750692 1544.6596919094782 1503.3345220021831 1342.2791734851855 1495.5785296586507 1605.7404277843748 1496.9101966183239 1676.5856133883667 1640.510518583605 0.7179737772405393 0.9331962696530233 0.8423556913662325 0.9415725619626729 0.9163821292045979 0.8182082091397326 0.9116543373034348 0.9788053228520288 0.9124660766641937 1.021990163669239 1.0 10.679929128783433 -2.0000000000874834 0.07533482034500649 1.0910899412618609 0.4021458551896027 0.507280002712484 0.05865771380392099 122.34677365065406 0.6569069091774763 0.9541832271779656 8.83676795419524 0.009999999997985622 2.0000000000874834 -0.6889440860722582 LGHVVMGNNAVS(ph)PYQQVIEK ddPTM_A549_MK2206_60min_R1 3 LGHVVMGNNAVSPYQQVIEK 20 0 P60228;H0YAW4;E5RGA2 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 1 LGHVVMGNNAVS(0.998)PY(0.002)QQVIEK;LGHVVMGNNAVS(0.991)PY(0.009)QQVIEK;LGHVVMGNNAVS(0.936)PY(0.064)QQVIEK 124.86 1.8716e-15 11561700.0 5023.04 5633.4 6114.7 5239.1 7605.3 5302.799999999999 5727.0 5597.7 7692.5 7439.1 8734.5 True False 5870.80635046266 5920.11599780314 6981.856406054809 6522.679735192139 6486.570444679987 5863.938776286242 6767.521768511261 6391.191117237284 5950.161032398276 5758.602143320665 6565.48259006355 0.8941926613814742 0.9017030989866408 1.0634186155061038 0.9934806232010743 0.9879807547577705 0.8931466492898708 1.0307729364408773 0.9734533645569261 0.9062793101307549 0.8771026446762576 1.0 12.680685343716721 -6.59318179024307 0.002048898392095291 1.9125238646390952 1.3409828317659513e-05 0.0 0.06191882514800506 512622.54705947626 248.82190923559367 115026.70484976616 117236.55446294142 2.551632997400377e-07 6.59318179024307 -1.9125104548107774 LGHVVMGNNAVS(ph)PYQQVIEK ddPTM_A549_PD325901_60min_R1 4 LGHVVMGNNAVSPYQQVIEK 20 0 P60228;H0YAW4;E5RGA2 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 1 LGHVVMGNNAVS(1)PYQQVIEK;LGHVVMGNNAVS(1)PYQQVIEK;LGHVVMGNNAVS(1)PYQQVIEK;LGHVVMGNNAVS(0.988)PY(0.012)QQVIEK 161.68 1.2893e-27 30885300.0 8521.699999999999 9045.0 9947.6 10042.5 12678.7 10502.800000000001 10602.3 10358.0 11583.0 11157.7 11075.1 True False 9386.816710656027 9807.253893430265 10622.703955778245 10662.8024168277 11788.191851140498 10417.268678992243 11005.776328301174 10151.401564306198 11096.206790967522 10453.200917815006 9712.932910843312 0.9664245389955061 1.0097108652404727 1.0936659455270492 1.0977943031938349 1.2136593508208433 1.072515251017808 1.13310535852817 1.0451427655773662 1.1424156732906035 1.076214673133928 1.0 13.245691281338999 -5.615028191096597 3.4179073887805242 1.084918764993808 0.9729972078825412 0.373802615324055 0.053633821482837386 0.24494080403930343 5.383794433484659 0.0091326473304728 0.045791964700259015 2.4264525831125372e-06 5.615028191096597 -0.11192155711126672 LGIAVIHGEAQDAES(ph)DLVDGRHSPPMVR ddPTM_A549_MK2206_60min_R1 1 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAES(0.785)DLVDGRHS(0.215)PPMVR 141.75 7.2212e-36 86629000.0 2015.3 1717.3 1572.1 1578.2 2783.4 2311.0 2017.1 1738.0 3610.6 3010.4 3056.0 True False 2355.433370645544 1804.703234818641 1795.0474194905348 1964.8590708480908 2373.9655471476854 2555.5484860823553 2383.580960234691 1984.366822401772 2792.804864943416 2330.3485491863976 2297.1108586907317 1.0253895068817245 0.7856404613607787 0.7814370006128679 0.855361012906442 1.0334571090316285 1.1125055094375913 1.03764298149426 0.8638533116041198 1.2157901976638652 1.0144693454257625 1.0 11.165604767596493 -6.816965293777197 3.9264538376259908 1.079445800068233 0.8490313111305237 0.373688583194555 0.10372005561357277 0.1538314015393062 4.835025882268972 0.016884155400078954 0.033824926050444834 1.524174551863323e-07 6.816965293777197 -0.23041448893770933 LGIAVIHGEAQDAESDLVDGRHS(ph)PPMVR ddPTM_A549_MK2206_60min_R1 25 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAES(0.004)DLVDGRHS(0.996)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.008)DLVDGRHS(0.992)PPMVR;LGIAVIHGEAQDAES(0.009)DLVDGRHS(0.991)PPMVR;LGIAVIHGEAQDAES(0.058)DLVDGRHS(0.942)PPMVR;LGIAVIHGEAQDAES(0.011)DLVDGRHS(0.989)PPMVR;LGIAVIHGEAQDAES(0.07)DLVDGRHS(0.93)PPMVR;LGIAVIHGEAQDAES(0.476)DLVDGRHS(0.524)PPMVR;LGIAVIHGEAQDAES(0.055)DLVDGRHS(0.945)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.451)DLVDGRHS(0.549)PPMVR;LGIAVIHGEAQDAES(0.008)DLVDGRHS(0.992)PPMVR;LGIAVIHGEAQDAES(0.021)DLVDGRHS(0.979)PPMVR;LGIAVIHGEAQDAES(0.004)DLVDGRHS(0.996)PPMVR;LGIAVIHGEAQDAES(0.063)DLVDGRHS(0.937)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAES(0.006)DLVDGRHS(0.994)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAES(0.1)DLVDGRHS(0.9)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.013)DLVDGRHS(0.987)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAES(0.002)DLVDGRHS(0.998)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR 217.29 2.0431e-90 1456562900.0 16809.859999999997 20286.41 20025.7 16666.670000000002 27011.804999999997 22744.660000000003 17875.600000000002 20481.17 32000.320000000007 30009.149999999998 31260.82 True False 19646.953406381046 21318.90161873709 22865.645384194126 20750.004898195257 23038.404266821723 25151.484824516607 21123.365134485757 23384.43856845251 24752.298614010444 23230.062172740156 23497.8956392593 0.836115442335855 0.9072685463424377 0.9730933244077893 0.8830580072679793 0.9804454245821963 1.0703717988471513 0.8989470997221438 0.9951716071707618 1.053383630347534 0.9886018105352524 1.0 14.52024394115915 -3.5426979323233954 0.3237832336796428 1.0242859812086524 0.33272231743934105 0.4722173382727095 0.05036051719754792 10.657132235894926 0.3254228490497157 0.015341555095764797 3.670859425839297 0.00028661708032747153 3.5426979323233954 -0.6915636637693114 LGIAVIHGEAQDAESDLVDGRHS(ph)PPMVR ddPTM_A549_PD325901_60min_R1 22 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.004)DLVDGRHS(0.996)PPMVR;LGIAVIHGEAQDAES(0.043)DLVDGRHS(0.957)PPMVR;LGIAVIHGEAQDAES(0.193)DLVDGRHS(0.807)PPMVR;LGIAVIHGEAQDAES(0.003)DLVDGRHS(0.997)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAES(0.155)DLVDGRHS(0.845)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAES(0.004)DLVDGRHS(0.996)PPMVR;LGIAVIHGEAQDAES(0.006)DLVDGRHS(0.994)PPMVR;LGIAVIHGEAQDAES(0.076)DLVDGRHS(0.924)PPMVR;LGIAVIHGEAQDAES(0.113)DLVDGRHS(0.887)PPMVR;LGIAVIHGEAQDAES(0.002)DLVDGRHS(0.998)PPMVR;LGIAVIHGEAQDAES(0.105)DLVDGRHS(0.895)PPMVR;LGIAVIHGEAQDAES(0.015)DLVDGRHS(0.985)PPMVR;LGIAVIHGEAQDAES(0.004)DLVDGRHS(0.996)PPMVR;LGIAVIHGEAQDAES(0.005)DLVDGRHS(0.995)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.011)DLVDGRHS(0.989)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR 240.46 1.5993e-120 2659169400.0 25765.729999999996 30203.43 28123.180000000004 31762.309999999994 34492.17 35497.29 27302.87 32053.969999999998 34473.76000000001 36597.15000000001 37929.01 True False 28381.447941872088 32748.77904504682 30031.78811321962 33724.19575126021 32069.558970726717 35208.211839328986 28341.895658553727 31414.628422496997 33024.94775292969 34286.399703291325 33263.9822218043 0.8532185879797716 0.9845116807325683 0.9028320155105783 1.0138351904587732 0.9640925959161124 1.058448492563535 0.8520295456379791 0.9444037160982168 0.9928140152528725 1.0307364727009998 1.0 15.021673271798917 -3.958535380211852 0.8305957553320154 0.9846244196195568 4.1463052399039934e-21 0.2602542019511478 0.05642080495847883 15.92134546456696 1.479701582652996 0.008069757934061242 23.57830067517364 0.00011001822142573513 3.958535380211852 -0.9846244196195568 LGIHEDS(ph)QNR ddPTM_A549_MK2206_60min_R1 1 LGIHEDSQNR 10 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 LGIHEDS(1)QNR 99.215 0.00014701 10007000.0 780.78 684.71 673.31 764.5 929.12 584.93 598.63 700.71 962.67 1064.9 1168.8 True False 912.5565757617377 719.5588143671299 768.7954824865917 951.8025343197093 792.447678797821 646.8269043548898 707.3933222077693 800.0377883343762 744.6267820680986 824.3383503948294 878.554702761037 1.0387020556532711 0.8190256248196838 0.8750684278059129 1.0833731028113287 0.9019901393816376 0.7362397609643482 0.805178459559367 0.910629452918634 0.847558814184202 0.9382891558194137 1.0 9.778988307476881 -4.249264989567555 15.435597243997192 0.9102674498755168 0.8976849557191645 0.0 0.10008748613477464 0.0 0.0 0.013755679494472695 0.0 5.632938509932487e-05 4.249264989567555 -0.012582494156352264 LGIHEDS(ph)TNR ddPTM_A549_MK2206_60min_R1 2 LGIHEDSTNR 10 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 LGIHEDS(0.944)T(0.056)NR;LGIHEDS(0.984)T(0.016)NR 138.42 9.243e-08 29555000.0 1509.8000000000002 1556.83 1392.26 1675.12 2182.6 1465.35 1572.19 1513.2 2164.33 2126.58 2465.6000000000004 True False 1764.6173289339777 1636.0659972414276 1589.7034032567217 2085.524475198995 1861.542431272738 1620.412364379392 1857.8365722430108 1727.700733980645 1674.1127107248062 1646.184101026046 1853.32347290179 0.9521367180285463 0.8827741196628792 0.8577581984475099 1.125288977176576 1.0044347133628428 0.8743278699439749 1.0024351384996784 0.9322175859973032 0.9033030311236552 0.8882335572260242 1.0 10.855898991188168 LGIHEDS(ph)TNR ddPTM_A549_PD325901_60min_R1 2 LGIHEDSTNR 10 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 LGIHEDS(0.97)T(0.03)NR;LGIHEDS(0.997)T(0.003)NR 140.0 3.6216e-08 43369000.0 2573.3 2514.5 2755.0 2790.7 3235.3 3182.1000000000004 2971.9 3234.9 3090.5 3698.5 3201.0 True False 2834.539521636664 2726.405739638517 2941.9708671608278 2963.0752008604477 3008.063689179082 3156.1860326218944 3084.9972807860813 3170.377381770044 2960.617032503248 3464.9760788100416 2807.2972928108493 1.0097040769054204 0.9711852558760036 1.047972679877853 1.055490349543145 1.0715159013911248 1.1242792278197635 1.098920762217236 1.129334392153264 1.0546147143321913 1.2342747195615613 1.0 11.454966138021856 -5.775845723196637 23.10125965292386 1.050752439219406 0.9904446927742446 0.03892095275874263 0.06834125670977056 108.3176711477984 173695.92081700586 0.007074129759474608 0.022176671646966087 1.675537980837146e-06 5.775845723196637 -0.06030774644516146 LGIHEDSTNRR ddPTM_A549_MK2206_60min_R1 2 LGIHEDSTNRR 11 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 107.83 4.1321000000000006e-05 19349700.0 1295.42 1047.43 1400.2600000000002 1028.63 1660.1 1041.74 699.29 1279.78 1746.44 1766.23 1599.51 False True 1514.0552260217598 1100.7397130647466 1598.8379235518191 1280.644396176955 1415.901489121173 1151.976235348953 826.3419412436252 1461.1927341618755 1350.874128491602 1367.23741629999 1202.3075227697689 1.2592911525113095 0.9155226031763992 1.3298078014754153 1.0651554381251152 1.1776533559894438 0.9581377588781387 0.6872966571314237 1.215323622691564 1.1235678916651695 1.137177793872794 1.0 10.231590236310874 -7.24654736537138 24.148054782176736 1.0356065906418281 1.1418209382513147 0.13273563477625583 0.16137251987030143 1023.7723934337595 1660090.2775770542 0.02303940686967991 0.0397901062012911 5.668297481135791e-08 7.24654736537138 0.10621434760948656 LGIHEDSTNRR ddPTM_A549_PD325901_60min_R1 2 LGIHEDSTNRR 11 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 113.93 7.4499000000000004e-06 16133500.0 1619.32 1543.4299999999998 1293.2199999999998 1101.21 1470.0900000000001 1777.0 1275.01 1624.72 1846.69 1819.51 2089.8199999999997 False True 1783.7121743196224 1673.5002627680567 1380.985685963602 1169.2292406706329 1366.8359499351777 1762.528701162472 1323.5312032622423 1592.313685031817 1769.0800413374623 1704.6258280804816 1832.78538846047 0.9732247897381653 0.9130912289593208 0.7534901220069321 0.6379520744939915 0.7457697767240019 0.9616667135495809 0.72214194394795 0.8687944017108037 0.9652412401778695 0.930073885798685 1.0 10.839822146846139 -8.691601517488516 3.0324512515116258 0.9850698727939607 0.8118018685904775 0.2966557637317664 0.09933713723551034 0.19993623605523148 3.6730686255957306 0.01786049434039382 0.019878408472591702 2.0342226353275378e-09 8.691601517488516 -0.1732680042034832 LGILGS(ph)HEDLSK ddPTM_A549_MK2206_60min_R1 2 LGILGSHEDLSK 12 0 E9PJN4;Q9Y210-2;Q9Y210-3;Q9Y210 E9PJN4 TRPC6 Short transient receptor potential channel 6 1 LGILGS(1)HEDLSK;LGILGS(1)HEDLSK 65.805 0.0017462 3460100.0 1202.8 1439.15 1246.93 1151.42 1686.96 1504.1 1403.0 1341.3200000000002 2166.71 2241.16 1973.54 True False 1405.803234363351 1512.3965878933475 1423.7634239458891 1433.5179516892083 1438.8104187023985 1663.2628636592256 1657.9069392738431 1531.4562176202217 1675.953644524884 1734.8803994467798 1483.4555510669202 0.9476544365298167 1.0195092039027476 0.959761431963297 0.9663369762971353 0.969904637633118 1.1212084261392163 1.1175979880768623 1.0323573338741283 1.129763303874873 1.1694859331639778 1.0 10.5347459845062 -7.241502259295289 24.50463936725749 1.0687330421556047 0.9741726368404712 0.5663304167795973 0.05055206830772662 482.6909769928069 593273.6687086493 0.00786990864877644 0.013618149187869527 5.734528833103452e-08 7.241502259295289 -0.09456040531513354 LGILGS(ph)HEDLSK ddPTM_A549_PD325901_60min_R1 2 LGILGSHEDLSK 12 0 E9PJN4;Q9Y210-2;Q9Y210-3;Q9Y210 E9PJN4 TRPC6 Short transient receptor potential channel 6 1 LGILGS(1)HEDLSK;LGILGS(1)HEDLSK 83.499 0.00017214 7589000.0 1898.7800000000002 2188.38 2418.7 2295.9 2777.4 2338.5299999999997 2245.6000000000004 2444.11 2391.67 2220.5 2301.7 True False 2091.542747792043 2372.802462720277 2582.847526824644 2437.7125286327814 2582.3250055098397 2319.4857870171504 2331.05753683947 2395.360308682798 2291.1564271564625 2080.2972510470995 2018.6054916784535 1.0361324966241634 1.1754661683533378 1.2795207074746575 1.2076220631926666 1.279261854857364 1.1490535404659568 1.1547860869541255 1.1866411334743154 1.1350194164246452 1.0305615731369826 1.0 10.979143268232816 -9.93964436701364 0.524831279147244 0.993634652618244 1.195271552200343 0.5025423720598932 0.06335356843571653 0.5300261081361259 0.2886551204258317 0.04783300893732861 0.016909571269980845 1.1490942010943067e-10 9.93964436701364 0.20163689958209896 LGIQTDDKGHIIVDEFQNTNVK ddPTM_A549_PD325901_60min_R1 2 LGIQTDDKGHIIVDEFQNTNVK 22 1 P00390-2;P00390-3;P00390 P00390-2 GSR Glutathione reductase, mitochondrial 0 ; 96.131 2.6594e-06 17114100.0 6332.3 6471.2 6010.2 7274.200000000001 8178.6 7564.5 6292.6 7412.4 7063.7 7421.0 8182.8 False True 6975.150434407121 7016.550734678379 6418.088314268603 7723.51081309316 7604.163350638292 7502.897220001982 6532.068336442844 7264.553867084693 6766.837253678438 6952.436793524219 7176.367475042988 0.971961157042803 0.9777301342328972 0.8943366315323976 1.0762423802784562 1.0596117572132469 1.0455007001933159 0.9102193218448189 1.0122884443067315 0.9429334934716262 0.9687960960336096 1.0 12.809038051849072 -7.7365930148681 24.99997977932562 0.9716503005151607 1.0038213016576076 0.10699536382989727 0.05294852961642209 515.0570849924504 518240.4569419286 0.008493416875096527 0.012594804439568704 1.834032321822224e-08 7.7365930148681 0.032171001142446976 LGIYDADGDGDFDVDDAK ddPTM_A549_MK2206_60min_R1 2 LGIYDADGDGDFDVDDAK 18 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2;Q12797-9;Q12797-8;Q12797-10;Q12797-5;E5RG29;Q12797-3;Q12797-4;G3XAN5;E5RHK2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 0 ; 183.66 3.1915e-39 5493500.0 2578.1 3037.9 2656.9 2530.3599999999997 3566.2 3413.0 2310.74 2797.9 4127.9 4622.4 4338.2 False True 3013.2202515066156 3192.5161340799805 3033.6883715058834 3150.298313592178 3041.6167041165754 3774.1613946339544 2730.5715472969623 3194.51089320939 3192.9372409017683 3578.196629603776 3260.9052117709884 0.9240441091724172 0.9790275787704157 0.9303209306897626 0.9660809220152892 0.932752259445371 1.1573968421437857 0.8373661207447354 0.9796392982163563 0.9791567167840776 1.097301637805187 1.0 11.671056789993958 -2.0000000000000004 0.15287451320656542 1.0002648024846803 0.782607862030248 0.0901698646916016 0.0782346504404092 156.04251017335253 1.479424660373555 0.1127761690090185 7.6327323970230125 0.00999999999999999 2.0000000000000004 -0.2176569404544323 LGIYDADGDGDFDVDDAK ddPTM_A549_PD325901_60min_R1 2 LGIYDADGDGDFDVDDAK 18 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2;Q12797-9;Q12797-8;Q12797-10;Q12797-5;E5RG29;Q12797-3;Q12797-4;G3XAN5;E5RHK2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 0 ; 222.79 1.7268999999999998e-63 14941900.0 5247.2 4960.5 5397.0 4744.6 6796.9 5537.700000000001 5489.8 5654.1 6081.4 5968.6 5784.1 False True 5779.891881215522 5378.538743876266 5763.272874797456 5037.663166231587 6319.50919203206 5492.602807218585 5698.717343133827 5541.324539944358 5825.819906638169 5591.741577392351 5072.692368430876 1.1394130496037556 1.0602927110953502 1.1361368788425457 0.9930945542021653 1.2457899539425175 1.0827786130696506 1.123410790411601 1.0923833218095271 1.1484670237237857 1.1023222327046085 1.0 12.308535956072095 -10.877550178207226 1.052835276239715 0.998059692585535 1.1143868012391815 0.041179550989873914 0.0662306254663894 0.46768406694288056 0.8948257903860553 0.041317284894716255 0.009302030125993812 1.3257139364642132e-11 10.877550178207226 0.1163271086536466 LGKS(ph)EAPETPMEEEAELVLTEK ddPTM_A549_MK2206_60min_R1 2 LGKSEAPETPMEEEAELVLTEK 22 1 Q5JTH9-2;Q5JTH9-3;Q5JTH9;A0A087X1U8 Q5JTH9-2 RRP12 RRP12-like protein 1 LGKS(0.992)EAPET(0.008)PMEEEAELVLTEK;LGKS(0.902)EAPET(0.098)PMEEEAELVLTEK 74.748 4.5279e-05 2215580.0 1058.08 1883.6 1522.1799999999998 1645.67 2443.3999999999996 1758.88 1591.53 1393.21 2244.4 2700.2 2789.5 True False 1236.6580364276479 1979.4671944939112 1738.0480128491201 2048.859223876933 2083.979096752408 1945.0035141499475 1880.6903999019955 1590.7017840266813 1736.046983570322 2090.2229446296546 2096.790163716558 0.5897862637030274 0.9440463946975544 0.8289088927088595 0.9771408027999009 0.9938901530606944 0.9276099954143391 0.8969378206965996 0.7586366111176163 0.8279545629368945 0.9968679655215176 1.0 11.033966775608821 -10.846293245537488 1.1290472844854624 0.998968688945172 0.8669669024710568 0.18958533836137015 0.10892621610113373 0.7014736141897758 1.6072670012852415 0.07105217464814137 0.01795880371398122 1.424645315759094e-11 10.846293245537488 -0.1320017864741152 LGKS(ph)EAPETPMEEEAELVLTEK ddPTM_A549_PD325901_60min_R1 2 LGKSEAPETPMEEEAELVLTEK 22 1 Q5JTH9-2;Q5JTH9-3;Q5JTH9;A0A087X1U8 Q5JTH9-2 RRP12 RRP12-like protein 1 LGKS(0.997)EAPET(0.003)PMEEEAELVLTEK;LGKS(0.999)EAPET(0.001)PMEEEAELVLTEK 119.97 9.1211e-16 5196200.0 2669.7 2881.7 3088.0 2872.8 3280.1 3235.6000000000004 2983.2 3245.2 3182.2 3409.7 3068.6000000000004 True False 2940.7259786707336 3124.550972327028 3297.570249652498 3050.2463313978205 3049.717091730692 3209.2503463597627 3096.727308469677 3180.47194018985 3048.463200398588 3194.4109600969596 2691.1816534580976 1.0927266745044795 1.161033097974662 1.2253242903225083 1.1334226834811891 1.133226026497277 1.1925060288055844 1.1506942701138232 1.1818124339927136 1.132760100560805 1.186991950540472 1.0 11.394024060143629 -10.260667004928196 0.6274425545024086 0.9948005472098914 1.1616199509977159 0.0 0.063916957490222 0.30212977004380887 0.21512543831864347 0.02556451445918135 0.007451240195850942 5.486975172117182e-11 10.260667004928196 0.16681940378782445 LGLAVIHGEAQCT(ph)ELDMDDGRHSPPMVK ddPTM_A549_MK2206_60min_R1 3 LGLAVIHGEAQCTELDMDDGRHSPPMVK 28 1 C9JUN4;C9J168;B4DP31;Q14558;Q14558-2 C9JUN4 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 1 LGLAVIHGEAQCT(0.559)ELDMDDGRHS(0.441)PPMVK;LGLAVIHGEAQCT(0.548)ELDMDDGRHS(0.452)PPMVK;LGLAVIHGEAQCT(0.566)ELDMDDGRHS(0.434)PPMVK 86.95299999999999 5.1878e-10 17264000.0 2717.61 3386.33 3861.21 3122.96 5386.0 3662.52 3719.3 3330.79 5568.8 5115.099999999999 4844.4 True False 3176.276128814588 3558.6797328151233 4408.787638579637 3888.0853401950026 4593.726534791059 4050.0854354159856 4395.048666601003 3802.9396826165676 4307.4756915462485 3959.595357408763 3641.401781361711 0.87226741774889 0.9772829109465494 1.2107391337988966 1.0677441198869968 1.2615269642322258 1.1122325078616966 1.2069661439440127 1.044361460490759 1.182916895793756 1.0873821663063126 1.0 11.83027821687505 -5.55644031838649 5.492896279467278 1.1115176904010904 0.8947449606655914 0.5150511762778724 0.0778592204694073 0.11147409101458593 8.855261622838107 0.012216693637365045 0.0524177788065561 2.776896426529076e-06 5.55644031838649 -0.216772729735499 LGLAVIHGEAQCTELDMDDGRHS(ph)PPMVK ddPTM_A549_MK2206_60min_R1 26 LGLAVIHGEAQCTELDMDDGRHSPPMVK 28 1 C9JUN4;C9J168;B4DP31;Q14558;Q14558-2 C9JUN4 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 1 LGLAVIHGEAQCT(0.003)ELDMDDGRHS(0.997)PPMVK;LGLAVIHGEAQCT(0.067)ELDMDDGRHS(0.933)PPMVK;LGLAVIHGEAQCT(0.005)ELDMDDGRHS(0.995)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.001)ELDMDDGRHS(0.999)PPMVK;LGLAVIHGEAQCT(0.002)ELDMDDGRHS(0.998)PPMVK;LGLAVIHGEAQCT(0.04)ELDMDDGRHS(0.96)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.005)ELDMDDGRHS(0.995)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.035)ELDMDDGRHS(0.965)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.008)ELDMDDGRHS(0.992)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.002)ELDMDDGRHS(0.998)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.001)ELDMDDGRHS(0.999)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK 207.23 1.1426e-78 611808700.0 28011.02 32166.419999999995 34704.44 30620.670000000002 45413.32 36147.08 34469.939999999995 33092.420000000006 51584.939999999995 46724.07000000001 47374.84000000001 True False 32738.595372311695 33803.55338411169 39626.05143875332 38122.73552461411 38733.08078666126 39972.14001311024 40732.68191186958 37783.37187628586 39901.03345422205 36169.07013572407 35610.359748931995 0.9193559290928975 0.9492617772592289 1.112767512547855 1.0705518223740345 1.0876913645283497 1.1224862735150847 1.1438435949272097 1.0610219088679396 1.1204894793408746 1.0156895462649413 1.0 15.120009389959174 -5.683078947745443 5.883435592267648 1.074085838151556 0.928675530344073 0.6328917867752781 0.043064755410870806 0.11939674425946599 6.739513452142841 0.0072685122946435895 0.02895267009694874 2.074536365860928e-06 5.683078947745443 -0.14541030780748287 LGLAVIHGEAQCTELDMDDGRHS(ph)PPMVK ddPTM_A549_PD325901_60min_R1 22 LGLAVIHGEAQCTELDMDDGRHSPPMVK 28 1 C9JUN4;C9J168;B4DP31;Q14558;Q14558-2 C9JUN4 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 1 LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.001)ELDMDDGRHS(0.999)PPMVK;LGLAVIHGEAQCT(0.204)ELDMDDGRHS(0.796)PPMVK;LGLAVIHGEAQCT(0.016)ELDMDDGRHS(0.984)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.217)ELDMDDGRHS(0.783)PPMVK;LGLAVIHGEAQCT(0.02)ELDMDDGRHS(0.98)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.003)ELDMDDGRHS(0.997)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.004)ELDMDDGRHS(0.996)PPMVK;LGLAVIHGEAQCT(0.071)ELDMDDGRHS(0.929)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.107)ELDMDDGRHS(0.893)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK 230.44 1.0367999999999997e-104 1213832900.0 59576.509999999995 62949.27 68123.74 67419.8 73629.03000000001 75563.40999999999 65998.65000000001 69892.5 72731.20999999999 70367.97000000002 75153.31999999999 True False 65624.6734372915 68254.22590338226 72747.02665772731 71584.16792452487 68457.58093916402 74948.04664192874 68510.26474159719 68498.43925789444 69674.57017329587 65924.9243651271 65909.93807614731 0.9956719024902398 1.035568047788583 1.1037338037502167 1.086090656644556 1.038653394880653 1.137128160480738 1.0394527250571175 1.039273306231248 1.0571178217888657 1.0002273752550408 1.0 16.008208394588355 -10.488476412466046 0.5599852690165468 0.9934230472847446 1.0632697787061247 0.2816403932049091 0.036407919191510194 1.1527595354599924 0.5679700296511436 0.04056642728703463 0.008376306009444529 3.247308785710771e-11 10.488476412466046 0.06984673142138009 LGLGLDDESNNQQAAATQS(ph)PGDSRR ddPTM_A549_PD325901_60min_R1 2 LGLGLDDESNNQQAAATQSPGDSRR 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 LGLGLDDESNNQQAAAT(0.124)QS(0.865)PGDS(0.011)RR;LGLGLDDESNNQQAAAT(0.123)QS(0.868)PGDS(0.01)RR 145.18 1.8588e-32 13426500.0 3406.6 3320.5 3555.9 3441.3 3848.2 3628.6 3794.0 4545.799999999999 3591.8999999999996 4331.9 4461.5 True False 3752.4355241936278 3600.3301882957644 3797.224757363771 3653.861285240644 3577.9157075692956 3599.0498846584965 3938.3827461564633 4455.130452888885 3440.944934168718 4058.383094713323 3912.763783778695 0.9590242937103061 0.920150151466286 0.9704712492755329 0.9338312985794354 0.9144215969291085 0.9198229393706885 1.0065475361645846 1.1386147232702115 0.8794154526869177 1.0372164840459646 1.0 11.933972301045019 LGLGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 LGLGSLR 7 0 H0YNV0;Q17RC7 H0YNV0 EXOC3L4 Exocyst complex component 3-like protein 4 1 LGLGS(1)LR;LGLGS(1)LR 55.676 0.045424 1067500.0 585.93 493.58 179.34 572.12 574.84 697.76 500.57 563.14 681.57 632.2 642.81 True False 645.4131822611319 535.1757188191609 191.51109085902826 607.4585530212061 534.4652214903421 692.0776739015904 519.6194652724143 551.9077309252166 652.9259831235208 592.282784108073 563.7484451083227 1.1448602437158253 0.949316531979664 0.33971018904048583 1.0775347733411214 0.9480562228205278 1.2276356234891426 0.9217222145465446 0.9789964579311062 1.158186756502828 1.050615375079691 1.0 9.138907739007301 LGLGT(ph)LSSSLSR ddPTM_A549_MK2206_60min_R1 4 LGLGTLSSSLSR 12 0 O95248;O95248-5;O95248-4 O95248 SBF1 Myotubularin-related protein 5 1 LGLGT(0.997)LS(0.003)SSLSR;LGLGT(0.996)LS(0.004)SSLSR;LGLGT(0.98)LS(0.015)S(0.004)S(0.001)LSR;LGLGT(0.987)LS(0.008)S(0.002)S(0.002)LS(0.001)R 166.7 7.7455e-15 43131300.0 5410.6 5923.700000000001 5645.5 5277.1 7749.3 7218.0 5861.5 5931.8 9218.300000000001 9041.0 8235.1 True False 6323.777003530384 6225.191027831585 6446.1167907472845 6569.989736898022 6609.388235435639 7981.8039690793685 6926.45867751506 6772.65081537562 7130.3697686002015 6998.631820752798 6190.097392802379 1.0215957201066728 1.0056693187202534 1.0413595104727424 1.0613709801298714 1.067735742432873 1.2894472352503406 1.1189579481526246 1.0941105423075594 1.151899447800472 1.1306174001220972 1.0 12.595746393133558 -6.372741277591607 2.030079078981694 1.0946260828829972 1.0171324154159198 0.23727470521067429 0.06951073710324066 0.55140091188293 4.381808168883993 0.012264905399648552 0.036363646009901975 4.238954182157955e-07 6.372741277591607 -0.07749366746707742 LGLGT(ph)LSSSLSR ddPTM_A549_PD325901_60min_R1 2 LGLGTLSSSLSR 12 0 O95248;O95248-5;O95248-4 O95248 SBF1 Myotubularin-related protein 5 1 LGLGT(0.482)LS(0.482)S(0.037)SLSR;LGLGT(0.488)LS(0.488)S(0.019)S(0.005)LSR 210.31 1.994e-31 68790000.0 5851.1 6457.1 6758.299999999999 7455.4 6528.4 6923.4 7385.0 7824.400000000001 7336.8 7533.299999999999 8267.1 True False 6445.099364647836 7001.262478194422 7216.958878959354 7915.903125558101 6069.86770575734 6867.018125845954 7666.040216227058 7668.336203876948 7028.459810409271 7057.646152358978 7250.299109464717 0.8889425480714647 0.9656515369213946 0.9954015372328792 1.0918036629998462 0.8371885923759459 0.9471358384210082 1.057341235235333 1.0576579101221515 0.969402738327602 0.973428274586045 1.0 12.823824799077949 LGLGTLSS(ph)SLSR ddPTM_A549_MK2206_60min_R1 2 LGLGTLSSSLSR 12 0 O95248;O95248-5;O95248-4 O95248 SBF1 Myotubularin-related protein 5 1 LGLGT(0.003)LS(0.078)S(0.451)S(0.451)LS(0.018)R;LGLGT(0.004)LS(0.122)S(0.419)S(0.419)LS(0.036)R 54.199 0.021103 4284900.0 2402.7 2093.95 1966.28 1705.21 3121.0 2476.05 2406.1000000000004 1923.4099999999999 3862.9 3524.5 3544.5 True False 2808.2170196248953 2200.523111016418 2245.1280707307733 2122.986526549787 2661.9050343637014 2738.06396753103 2843.25722493713 2196.0592576960835 2987.959317783725 2728.313002128443 2664.302826776606 1.0540157039965323 0.8259283024815579 0.8426700028866579 0.7968262861163842 0.9991000300758583 1.0276849688455512 1.0671674392122428 0.8242528723181874 1.1214788678502787 1.024025112576741 1.0 11.379542354255749 -6.913246514698826 5.921470385410703 1.0373211706163308 0.8739846630389537 0.28263960639670593 0.09381357957662387 0.1677102645698707 9.158978889755726 0.013925024222435571 0.026558160492171464 1.2211063377243917e-07 6.913246514698826 -0.16333650757737705 LGLGTLSS(ph)SLSR ddPTM_A549_PD325901_60min_R1 2 LGLGTLSSSLSR 12 0 O95248;O95248-5;O95248-4 O95248 SBF1 Myotubularin-related protein 5 1 LGLGT(0.002)LS(0.07)S(0.462)S(0.462)LS(0.003)R;LGLGT(0.005)LS(0.104)S(0.589)S(0.301)LS(0.001)R 72.29 0.0020137 8569900.0 3261.5 3044.3999999999996 2500.1 3357.7 3845.5 2858.8999999999996 2824.1 2872.8 3488.6000000000004 3302.0 3735.3 True False 3592.6050790105987 3300.962272322729 2669.7718203226073 3565.097503110021 3575.405346254803 2835.6180662652723 2931.572670906815 2815.4997503319973 3341.9862739332916 3093.5111564771546 3275.8817800176084 1.0966833726799774 1.0076561042153926 0.8149780729597198 1.0882863737197677 1.0914329595360381 0.8656045170989138 0.8948957464793058 0.8594631733984196 1.020179145144648 0.9443293025246248 1.0 11.677667578619094 LGLHS(ph)LR ddPTM_A549_MK2206_60min_R1 1 LGLHSLR 7 0 P61204-2;P84077;P61204;H0YGG7 P61204-2 ARF3;ARF1 ADP-ribosylation factor 3;ADP-ribosylation factor 1 1 LGLHS(1)LR 55.06399999999999 0.012587000000000001 16151000.0 580.17 418.43 401.51 445.29 552.23 625.37 561.75 640.05 521.94 663.55 583.59 True False 678.088512205342 439.72629974096793 458.4501554606224 554.3860699898275 470.9976985346578 691.546238312991 663.8127035902224 730.7790475709172 403.7214233669104 513.6535941445104 438.66849673538115 1.5457880318549218 1.0024113949678608 1.0450947785684601 1.2637927594883818 1.0736984808343295 1.5764666107996212 1.5132445309621936 1.6659027329508609 0.9203337517315452 1.1709379587710915 1.0 8.776987291765343 -8.806520425898434 24.999007187621523 0.9623796106504744 1.3177974083878106 0.24988672726289263 0.22588863175273766 105.85184624523056 58698.06852964837 0.0393316339865993 0.04187180188568123 1.561275605752036e-09 8.806520425898434 0.35541779773733617 LGLHS(ph)LR ddPTM_A549_PD325901_60min_R1 3 LGLHSLR 7 0 P61204-2;P84077;P61204;H0YGG7 P61204-2 ARF3;ARF1 ADP-ribosylation factor 3;ADP-ribosylation factor 1 1 LGLHS(1)LR;LGLHS(1)LR;LGLHS(1)LR 72.643 0.0060275 40064000.0 1430.76 1542.58 1293.0700000000002 1348.23 1439.37 1261.08 1608.6399999999999 1398.87 1666.75 1596.4099999999999 1913.2800000000002 True False 1576.0097019301575 1672.578630284981 1380.8255060615797 1431.5071050475099 1338.2736167569312 1250.8101825897406 1669.8576754815833 1370.9684404577135 1596.702293779256 1495.6124001549654 1677.958689281207 0.9392422542924929 0.9967936880504903 0.8229198459308249 0.8531241646126161 0.7975605271487418 0.7454356239995125 0.9951721017618772 0.8170454071458697 0.9515742574468511 0.8913284991513385 1.0 10.712491482261765 -8.93587090470962 4.722430545124565 0.9794556875145941 0.8704588594119166 0.12758094846613532 0.08033519465436116 0.19445431201328067 8.081518032197408 0.013753786411471949 0.01437643659528527 1.1591218572739444e-09 8.93587090470962 -0.10899682810267752 LGLPKPEGEPLSLPT(ph)PRSPSDR ddPTM_A549_PD325901_60min_R1 1 LGLPKPEGEPLSLPTPRSPSDR 22 2 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGLPKPEGEPLS(0.012)LPT(0.476)PRS(0.476)PS(0.036)DR 56.688 0.0016289000000000002 5936100.0 1906.2 1660.9 2131.4 1964.6 2523.3 2569.2 2381.6 2536.7 2486.0 1882.9 2168.4 True False 2099.716020729729 1800.8698719290564 2276.049621149396 2085.9488800696736 2346.072112912428 2548.2772870155463 2472.233091261527 2486.103528497348 2381.522065297873 1764.0133726622757 1901.700546620133 1.1041254757283032 0.9469786792298706 1.196849643438652 1.0968860916493939 1.2336706307846788 1.3399992399142786 1.3000117687589636 1.3073054708407519 1.2523118161429359 0.9275978680226143 1.0 10.893074373174668 -5.774606374564041 24.959499195645755 1.1707275804495159 1.025552065580143 0.17865826677227847 0.1284102482435058 287.0072481177994 544057.7512072761 0.019071339452146036 0.059811992658596776 1.680326302081159e-06 5.774606374564041 -0.14517551486937297 LGLPPLT(ph)PEQQEALQK ddPTM_A549_MK2206_60min_R1 2 LGLPPLTPEQQEALQK 16 0 Q9UHX1-5;Q9UHX1-6;Q9UHX1;E9PQ56;A0A0J9YXX5;A0A0J9YVP6;A0A0J9YXJ8;A0A0J9YYL3;A0A0J9YWM1;A0A0J9YVR6;H0YEM1;Q9UHX1-4;Q9UHX1-3;Q9UHX1-2;E9PN18;E9PMU7;E9PL19 Q9UHX1-5 PUF60 Poly(U)-binding-splicing factor PUF60 1 LGLPPLT(1)PEQQEALQK;LGLPPLT(1)PEQQEALQK 102.73 1.1783e-06 4609100.0 1581.58 1786.21 1410.6399999999999 1379.4299999999998 2509.94 1904.3100000000002 1305.18 1675.93 2577.46 2452.63 2454.22 True False 1848.5120380814674 1877.1204594802323 1610.689963634709 1717.390411924965 2140.7311508974135 2105.822820221327 1542.3143114764327 1913.4982098203695 1993.6694253578498 1898.5791795744874 1844.7694409738122 1.0020287614400636 1.0175366188250292 0.8731117980707996 0.9309512472292437 1.1604328992827255 1.1415100301692502 0.836047192250908 1.037256020898892 1.0807146850315543 1.0291688150321214 1.0 10.849224804390227 LGLPPLT(ph)PEQQEALQK ddPTM_A549_PD325901_60min_R1 2 LGLPPLTPEQQEALQK 16 0 Q9UHX1-5;Q9UHX1-6;Q9UHX1;E9PQ56;A0A0J9YXX5;A0A0J9YVP6;A0A0J9YXJ8;A0A0J9YYL3;A0A0J9YWM1;A0A0J9YVR6;H0YEM1;Q9UHX1-4;Q9UHX1-3;Q9UHX1-2;E9PN18;E9PMU7;E9PL19 Q9UHX1-5 PUF60 Poly(U)-binding-splicing factor PUF60 1 LGLPPLT(1)PEQQEALQK;LGLPPLT(1)PEQQEALQK 119.32 1.2413000000000001e-07 6347900.0 2331.98 2922.4 2095.3 2687.7 2732.8 2914.5 2870.1000000000004 3510.7 2675.8 2962.3999999999996 3326.0 True False 2568.7208928870587 3168.6809041636916 2237.499658062463 2853.7131247904213 2540.857555648194 2890.7652782993955 2979.323226078985 3440.676334409127 2563.345431345155 2775.353558433654 2916.923085251135 0.8806268858700134 1.0863093786001838 0.767075302525443 0.9783299186802961 0.871074581464131 0.9910323974313887 1.0213924532818037 1.1795567568463667 0.8787840324985674 0.9514661433709719 1.0 11.510231629763544 -7.28638038986284 24.280495473947347 0.9707293036016301 0.9212201382055636 0.10895132579112854 0.10211787277711956 1477.9684914677093 1438823.5556564822 0.015868507817837656 0.025375175849024174 5.171536689514413e-08 7.28638038986284 -0.049509165396066535 LGLQS(ph)LR ddPTM_A549_MK2206_60min_R1 1 LGLQSLR 7 0 P18085;U3KQF2;C9JAK5 P18085 ARF4 ADP-ribosylation factor 4 1 LGLQS(1)LR 47.574 0.059147000000000005 2271200.0 417.29 730.65 474.15 555.71 802.86 630.7 537.46 691.9 975.17 778.64 665.8 True False 487.71835023901116 767.836964141524 541.3915997401161 691.85897494677 684.7603575422106 697.4402553752229 635.109525005075 789.9789438548829 754.2955520264973 602.7446832110338 500.4634848548072 0.9745333375930642 1.5342517234085247 1.0817804217967728 1.382436473157457 1.368252386566966 1.393588696241369 1.2690426858801316 1.5784946709629954 1.5071939808862 1.2043729491790998 1.0 8.967120999813647 -10.933557712772506 1.2221164993180165 1.0022107455152536 1.3630404051022706 0.17198319975097198 0.18388843351285633 0.3838882389531443 1.0289642159794197 0.11396451014172146 0.027485430612021192 1.1653121838780914e-11 10.933557712772506 0.36082965958701707 LGMLS(ph)PEGTCK ddPTM_A549_MK2206_60min_R1 5 LGMLSPEGTCK 11 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 LGMLS(0.924)PEGT(0.076)CK;LGMLS(0.983)PEGT(0.017)CK;LGMLS(0.991)PEGT(0.009)CK;LGMLS(0.989)PEGT(0.011)CK;LGMLS(0.997)PEGT(0.003)CK 100.55 0.00026513 43424100.0 17103.2 20786.800000000003 17351.8 15178.099999999999 23614.2 19003.7 17882.5 18297.5 26082.0 25195.000000000004 25166.099999999995 True False 19989.802026906622 21844.759332398597 19812.54615706117 18896.73518137081 20140.582461541584 21014.65892036488 21131.518775170698 20891.22665874362 20174.46864439544 19503.432001312547 18916.662820974096 1.0567298373972533 1.1547892743628085 1.0473594811392288 0.9989465562825811 1.0647006108926598 1.1109073053342478 1.1170849200600463 1.1043822505299508 1.066491951319592 1.031018641389953 1.0 14.20736997793693 -10.139083275425417 0.830108737942938 1.0041890632442014 1.0810425488607818 0.268378440645492 0.04031031559617026 0.49344300921514994 0.671697209290509 0.020012563793935716 0.008324298862327582 7.259667408708694e-11 10.139083275425417 0.07685348561658034 LGMLS(ph)PEGTCK ddPTM_A549_PD325901_60min_R1 6 LGMLSPEGTCK 11 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 LGMLS(0.976)PEGT(0.024)CK;LGMLS(0.953)PEGT(0.047)CK;LGMLS(0.736)PEGT(0.264)CK;LGMLS(0.995)PEGT(0.005)CK;LGMLS(0.998)PEGT(0.002)CK;LGMLS(0.996)PEGT(0.004)CK 121.68 9.84e-06 75381900.0 30574.5 31453.699999999997 36752.2 31694.1 32903.5 32557.0 32344.9 36520.6 27816.1 33276.399999999994 37555.3 True False 33678.4007322427 34104.41368576974 39246.425300932184 33651.772574476345 30592.471670912735 32291.866586238957 33575.802869308434 35792.167983143554 26647.08605009341 31175.32242501405 32936.23618266144 1.0225333746535359 1.0354678505652464 1.1915880455579377 1.021724898614602 0.9288393337128626 0.9804358460132218 1.019418329498854 1.086710933958676 0.8090507337362726 0.9465356712928119 1.0 15.007388078789228 -7.3356872389719125 0.6907707045607594 0.9213511438796984 1.0745601362445816 0.17140368984960075 0.08299492384760244 0.7638430159034798 0.7092095027253219 0.02005806426683892 0.053032281933014326 4.616499161636495e-08 7.3356872389719125 0.15320899236488317 LGMT(ph)PIRK ddPTM_A549_MK2206_60min_R1 2 LGMTPIRK 8 1 J3KTK7;A0A2R8YCU7;A6NHR9 J3KTK7 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 1 LGMT(1)PIRK;LGMT(1)PIRK 55.549 0.012742 7597000.0 2310.6 2668.1000000000004 2470.5 3654.7 3765.7 3136.7 2472.2 2929.8 5269.4 4026.6 3671.0 True False 2700.5727912537072 2803.8948936234897 2820.85404863009 4550.101664065719 3211.770518392625 3468.6235120270517 2921.3667393248734 3345.108122136195 4075.8893135026956 3116.9882634048463 2759.3893855542146 0.9786849240602213 1.0161287523617608 1.0222747334601094 1.6489523689139818 1.1639424777114415 1.2570257500394022 1.0587004337331414 1.2122638941964115 1.4770982793659135 1.1295934817038549 1.0 11.430133338660292 -6.042060357496803 24.997201357968187 1.2409238568399261 1.002854660402589 0.2703441969310266 0.1741673522582767 553.9309325833824 329210.31997888425 0.0287586569487984 0.07609618725925975 9.076943716161147e-07 6.042060357496803 -0.23806919643733715 LGNDFHTNK ddPTM_A549_PD325901_60min_R1 1 LGNDFHTNK 9 0 H0YN88;A0A075B716;H3BNC9;P08708;H0YN73;A0A0J9YYC4 H0YN88 RPS17 40S ribosomal protein S17 0 64.297 0.0068123 2083300.0 1647.0 1550.0 1435.0 1493.0 1722.4 1475.2 1685.6 1874.9 1673.3 1739.6 1923.7 False True 1814.2022275426827 1680.6239397254733 1532.3877293560022 1585.2192191509841 1601.4245659574242 1463.1864603010006 1749.746430395712 1837.5036486694028 1602.977020057494 1629.7613591180063 1687.0970953390283 1.0753395477680625 0.9961631398504339 0.9082984812134143 0.9396135074445306 0.9492189693063351 0.8672805283960067 1.0371343980318417 1.0891510949464054 0.9501391618099905 0.9660151532597475 1.0 10.720327290257417 LGNDFHTNKR ddPTM_A549_MK2206_60min_R1 2 LGNDFHTNKR 10 1 H0YN88;A0A075B716;H3BNC9;P08708;H0YN73;A0A0J9YYC4 H0YN88 RPS17 40S ribosomal protein S17 0 ; 84.65799999999999 0.0002796 26635000.0 6555.2 7398.5 6833.0 5932.9 8721.900000000001 7588.7 7065.7 7645.299999999999 9709.7 8891.599999999999 9407.8 False True 7661.5575007471225 7775.052048451471 7802.0221470509605 7386.460766338003 7438.920063831068 8391.73119702863 8349.44623009779 8729.044687749285 7510.468453204759 6882.981384515603 7071.583617928891 1.0834288208545602 1.0994782029783323 1.1032920726936124 1.0445271053022396 1.0519454291639645 1.1866834432605324 1.180703882073752 1.2343832950823295 1.0620631613777634 0.9733295618629021 1.0 12.787817614533678 -9.120181412696477 3.151526433379309 1.0236638675753857 1.1214639657311691 0.41469567828634635 0.05865534926565538 0.19573059977289775 4.0513165042849515 0.011922265038570863 0.01158908341666645 7.582607695646004e-10 9.120181412696477 0.09780009815578339 LGNDFHTNKR ddPTM_A549_PD325901_60min_R1 1 LGNDFHTNKR 10 1 H0YN88;A0A075B716;H3BNC9;P08708;H0YN73;A0A0J9YYC4 H0YN88 RPS17 40S ribosomal protein S17 0 70.942 0.00090173 22753000.0 4563.7 6436.4 6532.2 4979.1 5406.6 5450.0 5947.4 5350.8 4602.4 5343.9 4883.1 False True 5027.003464381628 6978.818016547765 6975.514373309601 5286.647698643449 5026.859067757433 5405.6170069417385 6173.731561542155 5244.074096378604 4408.977133277127 5006.485242004319 4282.5096565212925 1.1738452140386046 1.6296094057652866 1.628837978844361 1.234474203833512 1.1738114962806132 1.2622544817173285 1.4416153276247632 1.224532929749047 1.0295311597402361 1.1690540462367844 1.0 12.06424078407111 -8.20855731875209 0.5188668962220846 0.9836572835949279 1.4416190263428845 0.3413942951083905 0.16420466180210092 0.4678942573105065 0.2775632832398379 0.04988224056582708 0.07348852138049386 6.186466723702701e-09 8.20855731875209 0.45796174274795665 LGNGINIIVAT(ph)PGR ddPTM_A549_PD325901_60min_R1 1 LGNGINIIVATPGR 14 0 Q9NVP1 Q9NVP1 DDX18 ATP-dependent RNA helicase DDX18 1 LGNGINIIVAT(1)PGR 51.03 0.026088 2670400.0 1792.4 1418.6 1723.3 1961.3 1737.0 1898.7 1974.6 1840.7 1932.1 2027.6 1967.3 True False 1974.3631285048596 1538.1504005771328 1840.2535010447393 2082.4450465645164 1614.9991123246887 1883.2376167119792 2049.7444835425813 1803.985794498784 1850.9005560587368 1899.57698996762 1725.3345717422 1.1443363860211742 0.8915084794388295 1.0666067504730383 1.2069804203028953 0.9360498182644672 1.0915202463081306 1.1880272482297738 1.0455860701134412 1.072777759382485 1.1009905099446737 1.0 10.75266043680788 -10.580881166904883 0.8810927426886334 1.0002437783527243 1.0691782852352836 0.0 0.09469134374216782 1.3202122748073717 1.8390517299079931 0.057368405659296275 0.0160201041475175 2.6249366890035055e-11 10.580881166904883 0.06893450688255931 LGNKS(ph)PNGISDYPK ddPTM_A549_PD325901_60min_R1 1 LGNKSPNGISDYPK 14 1 Q9HC62;C9IYB7;Q9HC62-2 Q9HC62 SENP2 Sentrin-specific protease 2 1 LGNKS(0.999)PNGISDY(0.001)PK 50.387 0.015711000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LGNPYCS(ph)PTLVR ddPTM_A549_PD325901_60min_R1 2 LGNPYCSPTLVR 12 0 Q6ZV89-2;Q6ZV89 Q6ZV89-2 SH2D5 SH2 domain-containing protein 5 1 LGNPYCS(0.5)PT(0.5)LVR;LGNPYCS(0.5)PT(0.5)LVR 116.63 2.3652e-05 15209900.0 6179.6 6864.9 7556.2 6321.0 6889.5 6206.6 6577.9 7023.400000000001 5904.6 6256.5 7412.7 True False 6806.948442818921 7443.429215368641 8069.00917112183 6711.433813967424 6405.605287484715 6156.055507391676 6828.225584064994 6883.312777249287 5656.450195799608 5861.463522259027 6500.984892976876 1.0470641841011787 1.1449694681508802 1.2411979575339296 1.0323718520278211 0.9853284376040926 0.946941980136297 1.0503370945288062 1.0588107633791684 0.8700912690799154 0.901627002485618 1.0 12.666442586276348 -6.529682345447922 3.5931210551712756 0.9588682676900514 1.1450278053335792 0.5345520170083533 0.06852351166250571 0.13619056662646437 3.7749158097353948 0.011033438948648127 0.025444346090709686 2.953368609322898e-07 6.529682345447922 0.18615953764352777 LGNPYCSPT(ph)LVR ddPTM_A549_MK2206_60min_R1 2 LGNPYCSPTLVR 12 0 Q6ZV89-2;Q6ZV89 Q6ZV89-2 SH2D5 SH2 domain-containing protein 5 1 LGNPY(0.001)CS(0.399)PT(0.6)LVR;LGNPYCS(0.389)PT(0.61)LVR 54.343 0.022040999999999998 4844500.0 3217.8 3765.2 3498.3999999999996 3252.3 5111.4 4022.0 3513.5 3837.8 5064.6 5091.1 6035.4 True False 3760.8859723431906 3956.8325975305106 3994.525725046553 4049.1136460012963 4359.519831030634 4447.605370412474 4151.85747051935 4381.819902769572 3917.4761865043 3941.0169740774886 4536.643611433917 0.8290018556592041 0.8721938367734946 0.8805024302501879 0.8925350970475451 0.9609570873151972 0.9803735429432818 0.9151826385601962 0.9658726314154069 0.8635186102410382 0.8687076419546728 1.0 12.14740961390948 LGNSGAS(ph)PSSAGK ddPTM_A549_MK2206_60min_R1 2 LGNSGASPSSAGK 13 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 LGNS(0.054)GAS(0.902)PS(0.038)S(0.006)AGK;LGNS(0.004)GAS(0.467)PS(0.467)S(0.062)AGK 142.91 2.3606e-12 23487900.0 6395.1 7227.799999999999 6177.2 6035.77 8124.8 6508.4 5920.9 6113.200000000001 8901.0 9418.2 10195.6 True False 7474.436534816323 7595.664147570123 7053.219845860268 7514.533920956013 6929.652682857482 7197.114568073728 6996.650888629004 6979.7648208898245 6884.937711976225 7290.622078776027 7663.7511357549865 0.9752973971120458 0.9911157099207977 0.9203351884632182 0.9805294806478246 0.904211600834402 0.9391112055421293 0.9129538217892218 0.9107504533029465 0.8983769945053105 0.9513124773535327 1.0 12.903834998001116 -5.749335216534363 24.99737007420919 0.9420336282571188 0.983206571023948 0.2384346970902863 0.031178784013237346 358.9882424293549 741364.1682565623 0.005692972430162149 0.02171682418880299 1.7810035431944388e-06 5.749335216534363 0.04117294276682926 LGNSGAS(ph)PSSAGK ddPTM_A549_PD325901_60min_R1 2 LGNSGASPSSAGK 13 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 LGNSGAS(0.696)PS(0.152)S(0.152)AGK;LGNSGAS(1)PSSAGK 235.02 2.2662999999999998e-56 73646000.0 18001.3 20001.1 21056.4 19344.1 22925.8 21703.0 20083.6 21824.5 22459.4 21090.3 24643.0 True False 19828.778724143343 21686.66289086654 22485.41392641932 20538.941123361386 21315.570897716385 21526.25796360673 20847.89238816762 21389.193226510964 21515.509522667373 19758.654858706872 21612.06722484778 0.9174864448573361 1.0034515747726807 1.0404101418196332 0.950345976147409 0.9862809825618853 0.9960295671696602 0.9646412891127059 0.9896875205866206 0.9955322320083573 0.9142417822941988 1.0 14.39954945417156 LGNSGASPS(ph)SAGK ddPTM_A549_MK2206_60min_R1 2 LGNSGASPSSAGK 13 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 LGNSGAS(0.312)PS(0.686)S(0.001)AGK;LGNSGAS(0.339)PS(0.597)S(0.064)AGK 160.65 1.3897e-18 19529400.0 4882.799999999999 5340.799999999999 4993.7 5043.5 7084.4 4384.0 4937.8 4373.6 7947.8 7783.4 9147.5 True False 5706.897267001469 5612.62390759879 5701.881749704141 6279.15772641132 6042.294144647934 4847.911970136323 5834.934344081531 4993.571193588257 6147.635990028604 6025.124534193934 6875.923291843415 0.8299826837468203 0.8162720364051737 0.8292532519186209 0.91320939165508 0.8787611333325408 0.7050561450979498 0.8486037578405273 0.7262400962954162 0.8940815260870137 0.8762640707963185 1.0 12.747337734787195 -9.535280499920393 1.1054854612336045 0.9779622957562638 0.8225732246772347 0.2677260725942109 0.06735890301780793 0.2376672995739186 0.6032705465789763 0.01672019357542336 0.012226891755570466 2.915543329395123e-10 9.535280499920393 -0.1553890710790291 LGPATGPPGPSAS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 LGPATGPPGPSASPTR 16 0 Q9ULC8-2;Q9ULC8 Q9ULC8-2 ZDHHC8 Probable palmitoyltransferase ZDHHC8 1 LGPATGPPGPS(0.022)AS(0.917)PT(0.06)R 78.244 0.00038204 8824800.0 9557.3 9763.6 9834.8 10140.0 11221.0 10627.0 10685.0 10286.0 11234.0 10863.0 12177.0 True False 10527.5500602876 10586.412837357178 10502.24866945673 10766.324770389136 10432.875670348503 10540.457235370615 11091.623522056347 10080.837660789106 10761.87404728734 10177.108326108826 10679.306196362926 0.9857897008209194 0.9913015548671706 0.9834205028256895 1.0081483358961882 0.9769244816579611 0.9869983163288643 1.0386089993218701 0.9439599797430996 1.007731574449334 0.9529746726032507 1.0 13.382530301895125 LGPELSPSPT(ph)SPTATSTTPSR ddPTM_A549_MK2206_60min_R1 1 LGPELSPSPTSPTATSTTPSR 21 0 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 LGPELS(0.003)PS(0.022)PT(0.486)S(0.486)PT(0.002)ATSTTPSR 109.87 4.0883999999999996e-10 5154100.0 1344.2 1578.6 1422.6 1569.4 1803.5 1553.2 1517.5 1131.5 2280.8 2022.1 2029.6 True False 1571.0680974652623 1658.9439972542395 1624.346071475881 1953.9030704530423 1538.2075390820037 1717.558593069283 1793.2101071618376 1291.8935900734205 1764.202441689177 1565.3062055905577 1525.594305889631 1.0298072635694022 1.0874083567628732 1.0647300302610032 1.2807487960002897 1.0082677505701736 1.1258291843634738 1.175417409621328 0.8468133271643729 1.1564033995659184 1.026030445674592 1.0 10.575155648737322 LGPELSPSPTS(ph)PTATSTTPSR ddPTM_A549_MK2206_60min_R1 1 LGPELSPSPTSPTATSTTPSR 21 0 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 LGPELS(0.002)PS(0.009)PT(0.166)S(0.821)PT(0.002)ATSTTPSR 118.72 1.0654e-14 5784300.0 2568.0 2904.8 2461.5 2157.8 3577.9 2897.5 2311.9 2974.0 4246.1 3446.7 3387.3 True False 3001.415618427906 3052.6419125960465 2810.577713298105 2686.461096867324 3051.595649615471 3204.1115267951614 2731.9423042816807 3395.573607493021 3284.365129628381 2668.0880761628864 2546.1399252758906 1.178810162250876 1.1989293605948514 1.1038583093557048 1.0551113354762813 1.1985184393527826 1.2584192624244621 1.0729741430002742 1.3336162611428706 1.289938976654042 1.0478953060184946 1.0 11.314095990607786 -10.992850978772436 1.3040172477348708 1.001278479250706 1.1959125231047418 0.35730318163598807 0.08370412127433251 0.36278522135326724 1.109527742381777 0.0612487780696834 0.014409531993569145 1.016597462241634e-11 10.992850978772436 0.19463404385403593 LGPELSPSPTS(ph)PTATSTTPSR ddPTM_A549_PD325901_60min_R1 1 LGPELSPSPTSPTATSTTPSR 21 0 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 LGPELSPS(0.001)PT(0.171)S(0.775)PT(0.047)AT(0.004)S(0.001)T(0.001)TPSR 78.78 0.00019269 3913100.0 1307.3 1428.6 1364.1 1389.9 1757.0 1331.7 1722.0 1398.6 1985.0 2084.5 1930.3 True False 1440.0161336166059 1548.9931356721365 1456.6760289996678 1475.7509663080737 1633.5943813209435 1320.8550767237286 1787.531652314556 1370.7038258195248 1901.5773530234442 1952.8843142570042 1692.8853371798764 0.8506282746919427 0.9150018029292845 0.8604693992011874 0.871737106995374 0.9649763899794278 0.7802389492746739 1.0559082845459267 0.8096849773079945 1.1232759308974942 1.1535833357209246 1.0 10.72526854431969 -8.765170054236183 24.999574337638684 1.0582136359049945 0.8924755817665254 0.5474997306854613 0.0808187824598885 56.74732421664142 380267.84780971665 0.012960224460069125 0.014058511054506112 1.7172358471578613e-09 8.765170054236183 -0.1657380541384691 LGPGGLDDRYS(ph)LVSEQLEPAATSTYR ddPTM_A549_PD325901_60min_R1 1 LGPGGLDDRYSLVSEQLEPAATSTYR 26 1 Q9Y446;Q9Y446-2;E9PK71;E9PKC4;E9PQ15;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 LGPGGLDDRY(0.005)S(0.93)LVS(0.063)EQLEPAAT(0.001)S(0.001)T(0.001)YR 54.016999999999996 0.0015849 9546300.0 1495.6 1377.0 1219.8 1169.2 1848.1 1721.5 1173.4 1506.2 1237.3 1497.6 1685.3 True False 1647.4322109974717 1493.0446225819196 1302.5829632532768 1241.418828554139 1718.2958315988824 1707.4806747615069 1218.054379109118 1476.1576594089581 1185.3005838266527 1403.0412804179841 1478.0187839969146 1.1146219715438412 1.0101662027219787 0.8813033889398769 0.8399208738044905 1.1625669783114674 1.1552496444896814 0.8241129221749192 0.9987407977435012 0.8019523139085674 0.9492716165783945 1.0 10.529448889333562 -7.780375705274607 24.999143709522638 0.9068737300357883 1.0175202639296146 0.1977968742312699 0.11133687707276056 349.8867160793816 461908.2131607264 0.019462150437742926 0.02691407181190686 1.65815183064305e-08 7.780375705274607 0.11064653389382628 LGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_A549_MK2206_60min_R1 1 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPTFPTS(0.001)ECT(0.598)S(0.401)DVEPDTR 166.35 7.760799999999999e-35 30123000.0 1659.7 2122.1 1715.2 1457.9 2430.2 2354.7 1741.0 1878.4 2500.8 2430.6 3167.3 True False 1939.816784230839 2230.105825778044 1958.4411512691079 1815.0855654476184 2072.720799266473 2603.8727910766424 2057.317164130977 2144.6689523587393 1934.372792956986 1881.5257718749863 2380.7719969670015 0.8147847785096934 0.9367154135797551 0.8226076053330917 0.7623936974056975 0.8706086941156179 1.0937094330720714 0.8641386771819847 0.9008292079589951 0.8124981289351906 0.7903006983751351 1.0 11.217213747103385 -7.006527777084584 24.934593038031018 0.9186056843731705 0.8376143627868543 0.13786706855129482 0.08765405016837556 455.90331341119 1741457.2612740705 0.013447115762383137 0.024777053713565506 9.850816358533892e-08 7.006527777084584 -0.08099132158631617 LGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_A549_PD325901_60min_R1 1 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPTFPT(0.007)S(0.027)ECT(0.483)S(0.483)DVEPDTR 77.873 9.7586e-06 46940000.0 3144.2 4137.4 4501.1 4416.8 4665.9 4606.5 4342.3 5379.7 3875.0 5623.2 5135.7 True False 3463.3968693622987 4486.073218206559 4806.571713313104 4689.615704719401 4338.183280481157 4568.986191280207 4507.548602697733 5272.397663206994 3712.1472256754864 5268.150192338687 4504.041457884621 0.7689531505753338 0.996010640699897 1.067168621394211 1.0412017181835482 0.963175699212733 1.0144192130562866 1.000778666192553 1.1705926138795448 0.8241814069400112 1.1696495784061762 1.0 12.137004391567192 -8.80238155286896 24.999887113055085 0.9169746214496861 1.0049892558783557 0.0 0.12416974879993135 229.84430514555737 140345.2719837519 0.018350615137103916 0.019535802731757916 1.5762258554515576e-09 8.80238155286896 0.08801463442866964 LGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_A549_MK2206_60min_R1 1 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPTFPTSECT(0.037)S(0.963)DVEPDTR 248.69 3.968399999999999e-111 32145000.0 2549.9 2870.7 2046.0 2461.4 3803.8 2787.8 3324.8 2761.5 3837.4 3878.3 3920.7 True False 2980.260780930422 3016.8063682489196 2336.1535654714294 3064.443110496444 3244.26605886339 3082.803145608129 3928.8731230917156 3152.951081739062 2968.2350270685924 3002.1893364036696 2947.081984184804 1.011258185867807 1.0236587867043687 0.7927005689044772 1.0398228237088232 1.1008401110906965 1.0460527267825117 1.3331400837084233 1.0698552326195987 1.007177622813788 1.0186989545980036 1.0 11.525071479678346 -6.4680597456746645 24.997328820313832 1.0438626332197476 0.9449195239172669 0.1966024321344555 0.1067207567989655 488.8103505923197 222895.723193292 0.015950710088837916 0.037065859044342814 3.4036136313762505e-07 6.4680597456746645 -0.09894310930248074 LGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_A549_PD325901_60min_R1 1 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPTFPTSECT(0.178)S(0.821)DVEPDTR 152.88 3.3668e-29 50110000.0 2202.3 2783.6 2343.8 1666.5 2339.4 2439.0 2381.5 2295.6 2286.1 2316.8 2590.3 True False 2425.875874752428 3018.1837410450485 2502.8643624143547 1769.4359201038947 2175.0886144918704 2419.137592647874 2472.1292857068047 2249.8124571366384 2190.0231671268994 2170.51685261244 2271.7095212645863 1.0678635855705805 1.3285958054024989 1.101753696494212 0.7789006048268475 0.957467754627832 1.064897413161001 1.0882242040921901 0.9903609753258601 0.964041901760303 0.9554552781925147 1.0 11.149562656906589 -6.002978833378093 24.86995595920828 0.9823088214752701 1.2024660077066112 0.472268426967263 0.09317143094487539 67.74529269629375 565620.9623363682 0.011999120416004322 0.03633204331705264 9.931644520388675e-07 6.002978833378093 0.22015718623134106 LGPNGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 LGPNGSPR 8 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 LGPNGS(1)PR 59.067 0.013295 4655800.0 1468.9 1367.4 1193.5 1268.4 1822.8 1518.9 1306.2 1455.0 2328.2 2232.8 2281.5 True False 1716.8144088429715 1436.9948193623768 1362.756246525 1579.1580569406394 1554.6685346485583 1679.6289898357797 1543.5196322733395 1661.2507057506205 1800.8664173714233 1728.4089292530532 1714.9405838033083 1.0010926472073496 0.8379268838431023 0.7946375865120343 0.9208237718874567 0.9065436723181938 0.9794094359297182 0.9000426293779811 0.9686928640212029 1.0501042627246904 1.0078535347387227 1.0 10.743942878006399 -7.959099210633396 0.8879323123724189 1.0235107989970844 0.8836139407377807 0.4360667779183979 0.05592271780628717 0.32025482510771525 0.5062878806103981 0.01125152336545182 0.01771701167044091 1.0987548101951715e-08 7.959099210633396 -0.13989685825930376 LGPNGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LGPNGSPR 8 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 LGPNGS(1)PR 61.78 0.010672 5592800.0 2731.4 3369.5 2923.6 3098.4 3404.2 2825.6 3219.4 3335.8 3424.5 3446.7 3872.8 True False 3008.6897172495965 3653.459590261278 3122.0130770349883 3289.781131023048 3165.1007358524494 2802.5892504246945 3341.9160287232758 3269.264852115525 3280.580174019537 3229.074773782496 3396.470151701921 0.8858283991519803 1.075663682317533 0.9191934383614687 0.9685882649004253 0.9318794496888082 0.8251476165690307 0.9839379942875962 0.9625477940612388 0.9658792886419705 0.9507148979844425 1.0 11.729820460449767 -9.421368313887662 0.8032735824245707 0.9939256013215696 0.944541023009073 0.029576965135029276 0.06025031760723085 0.9190834721632505 1.2756349821687487 0.018502802736928 0.01284202338285635 3.789934341403317e-10 9.421368313887662 -0.04938457831249654 LGPRS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LGPRSPK 7 1 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 LGPRS(1)PK;LGPRS(1)PK 47.198 0.016748 9972000.0 5175.4 5129.5 4744.4 3412.3 5528.700000000001 4952.7 4106.6 3439.8 5913.4 6457.5 6184.3 True False 6048.8809936183 5390.569640134057 5417.2272610081345 4248.3136531839655 4715.435553824607 5476.791426663816 4852.716063308602 3927.4021839456927 4574.024341759376 4998.746265071477 4648.567632002981 1.3012354498135914 1.1596194928998724 1.1653540810535552 0.9138973527967037 1.0143846292267054 1.1781675260480118 1.0439164162956704 0.8448628684904061 0.9839642453020554 1.0753304374142474 1.0 12.182570530227887 -3.1724210444714047 0.49560895985362363 0.9888488168635392 3.845384836080623 0.5124785786490447 0.0874948352860179 14.723651975993262 0.45695815846955257 0.015655694949428083 38.3461834732713 0.0006723245278263468 3.1724210444714047 2.856536019217084 LGPRS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LGPRSPK 7 1 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 LGPRS(1)PK;LGPRS(1)PK 51.066 0.014126 15861900.0 7061.6 6133.1 6610.700000000001 6917.1 8322.0 8613.2 6401.9 6022.3 9101.400000000001 8792.5 10294.6 True False 7778.488433524837 6649.95786111632 7059.341855368456 7344.353557126105 7737.491429341431 8543.056954897356 6645.527807754097 5902.180502097046 8718.899808971068 8237.340049462566 9028.429462846165 0.8615549875573497 0.7365575472990354 0.7819014242088386 0.8134696723665643 0.8570141087309584 0.9462395414455841 0.7360668691162515 0.6537328032949392 0.9657161131790557 0.912377959351724 1.0 13.140259330704247 -8.903479943141472 9.603161325661711 0.9849111188229629 0.8010924729311659 0.4619211921936468 0.07626559675913773 0.16295147901502463 14.874636183075413 0.013027021998722051 0.013850462985086605 1.2488781197265418e-09 8.903479943141472 -0.18381864589179697 LGQEATVGK ddPTM_A549_MK2206_60min_R1 1 LGQEATVGK 9 0 P53396;P53396-2;K7ESG8 P53396 ACLY ATP-citrate synthase 0 65.157 0.016475999999999998 2350500.0 2534.1 2625.5 2306.8 2457.9 3308.7 2380.8 2082.3 2169.9 3185.2 3422.7 3687.2 False True 2961.7941272033313 2759.1267355828 2633.938927091638 3060.0856103393235 2821.9946130083863 2632.7346757528644 2460.6269562722196 2477.489970040047 2463.757285719206 2649.5096928316107 2771.566478456961 1.0686354270139238 0.9955116563247343 0.9503430451930038 1.1040996613738063 1.018194813273792 0.9499085431350037 0.8878109096059448 0.8938951994466906 0.8889403537204259 0.9559610831729701 1.0 11.436485897010032 -7.278240904942241 4.625329949513845 0.9367113180098444 1.0260635538169058 0.5046184158900477 0.04816813848071887 0.1755443326417711 10.090217451323946 0.008711234268612254 0.01455138684066029 5.2693748594028766e-08 7.278240904942241 0.08935223580706142 LGQEATVGK ddPTM_A549_PD325901_60min_R1 2 LGQEATVGK 9 0 P53396;P53396-2;K7ESG8 P53396 ACLY ATP-citrate synthase 0 ; 119.68 0.00041388 7144100.0 6102.7 6272.799999999999 6222.700000000001 7064.0 7891.299999999999 6937.0 7298.200000000001 7691.7 7175.099999999999 7254.3 8096.299999999999 False True 6722.241611429712 6801.43087039351 6645.009842134915 7500.327236491995 7337.042311507097 6880.507371955016 7575.936994728279 7538.283009478082 6873.555499082367 6796.262259973416 7100.506426674316 0.9467270652944437 0.9578796865590777 0.9358501271362495 1.0563087737398111 1.0333125372500462 0.9690164276321427 1.0669572759300554 1.0616542759765952 0.9680373604424373 0.957151765181431 1.0 12.793706209729569 -6.225211043621112 24.93284947224275 1.0020957379983817 0.947925019141594 0.34990318819112554 0.03836746245163715 608.3981824115419 418707.4276375108 0.005598395444596928 0.01481160655450253 5.953727542744486e-07 6.225211043621112 -0.0541707188567877 LGQSDPAPLQHQMDIYQK ddPTM_A549_MK2206_60min_R1 2 LGQSDPAPLQHQMDIYQK 18 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 ; 113.47 7.9228e-10 6457200.0 3997.5 3715.5 3638.8999999999996 3770.0 5082.9 3638.9 4266.7 4383.3 5914.8 5120.799999999999 4952.9 False True 4672.180270508395 3904.6030798163756 4154.950737729216 4693.650169241732 4335.212143276912 4023.9659826936754 5041.904160940635 5004.6461982932615 4575.107243994713 3964.0077234499404 3722.9582369140467 1.2549644592256175 1.048790459452721 1.1160347426226427 1.2607313514030418 1.1644536058159924 1.080851765350216 1.3542736286829422 1.344266005637926 1.2288902944522448 1.0647467608274057 1.0 11.862233717199905 -10.658529966408786 1.0194668804907392 1.004551306535036 1.2030652735318133 0.32141611403919246 0.09574328640629436 0.4436448980486811 0.848093439438241 0.060032935045879136 0.01754748119583946 2.1951794760776654e-11 10.658529966408786 0.19851396699677726 LGQSDPAPLQHQMDIYQK ddPTM_A549_PD325901_60min_R1 3 LGQSDPAPLQHQMDIYQK 18 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 ;; 157.98 1.3983e-22 28379600.0 7125.2 7887.799999999999 7851.0 8291.3 9850.400000000001 7998.9 8059.700000000001 8716.300000000001 8937.3 8914.4 9747.5 False True 7848.545058704991 8552.532588236509 8383.816071898247 8803.434770091466 9158.541886035187 7933.75961042684 8366.416293937069 8542.44655869493 8561.696361297942 8351.543262658983 8548.619294493521 0.9181067478066928 1.00045776909793 0.9807216561039945 1.0298077931441023 1.0713474972425712 0.9280749717720223 0.9786862656670399 0.9992779259917953 1.001529728527371 0.9769464488889472 1.0 13.061475710761274 -5.261080282692784 22.536303746797095 0.9996964532973447 0.918106662552327 0.30653528886356585 0.03370115061025267 6.245916723707287 391274.4015328613 0.004270295402020932 0.03459494518035705 5.481756210522015e-06 5.261080282692784 -0.08158979074501771 LGQVSVK ddPTM_A549_PD325901_60min_R1 2 LGQVSVK 7 0 O15066 O15066 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed 0 ; 72.234 0.055164 11110700.0 6491.8 6044.2 6261.6 6706.8 7551.1 6731.2 6263.700000000001 7484.799999999999 7155.3 6206.1 7777.5 False True 7150.842756989426 6553.565946121748 6686.5498300596155 7121.063803752053 7020.73678588081 6676.383338922244 6502.0685311281595 7335.509792287987 6854.5876242260165 5814.245786860351 6820.916805634604 1.048369736907255 0.9608042632491861 0.9803007455736755 1.0440039083704267 1.029295179217131 0.9788102580883313 0.9532543375630895 1.0754433753287078 1.004936406578599 0.852414118591409 1.0 12.735749950898018 -14.626412349251844 3.9798360939183164 1.003562859037001 1.004729927470669 0.0 0.05886892748024878 0.0 0.0 0.0 0.0044431789036922615 2.3636743955989486e-15 14.626412349251844 0.0011670684336679837 LGRETEEQDS(ph)DSAEQGDPAGEGKEVLCDFCLDDTR ddPTM_A549_PD325901_60min_R1 1 LGRETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTR 35 2 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 LGRET(0.001)EEQDS(0.992)DS(0.007)AEQGDPAGEGKEVLCDFCLDDTR 117.65 1.9061e-21 4972000.0 1310.1 1407.0 1595.1 2109.3 1470.3 1884.8 1820.7 2190.8 1248.4 1770.2 1665.9 True False 1443.1003875553536 1525.5728278669303 1703.353078115512 2239.586670432131 1367.0312002596381 1869.4508137034484 1889.987734825268 2147.102775350647 1195.9340894279426 1658.429269895778 1461.0048610101821 0.9877450965888992 1.0441942176784436 1.165877762335276 1.5329084318608046 0.9356787487444992 1.2795650881071365 1.2936217977525923 1.4696068662400454 0.8185695484962577 1.1351291937174601 1.0 10.512745262901799 -8.78245285659638 24.993434083555126 0.9143244920134695 1.2126480574324174 0.19841167577381758 0.1913471252259613 188.12557301957844 223755.63310654103 0.03168407893085595 0.03374683145951204 1.650240127966471e-09 8.78245285659638 0.2983235654189479 LGRETEEQDS(ph)DSAEQGDPAGEGKEVLCDFCLDDTRR ddPTM_A549_PD325901_60min_R1 3 LGRETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTRR 36 3 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 LGRET(0.005)EEQDS(0.823)DS(0.173)AEQGDPAGEGKEVLCDFCLDDTRR;LGRET(0.044)EEQDS(0.667)DS(0.287)AEQGDPAGEGKEVLCDFCLDDT(0.002)RR;LGRET(0.006)EEQDS(0.987)DS(0.006)AEQGDPAGEGKEVLCDFCLDDTRR 124.59 5.017699999999999e-22 28375700.0 2022.62 2497.2 3031.84 2793.6 2803.24 2978.17 2639.04 3121.87 2120.98 2926.46 3290.6000000000004 True False 2227.9548934258537 2707.6478079241633 3237.598894334987 2966.154327274071 2606.3500930530013 2953.9167709291155 2739.4701113380997 3059.6018537903633 2031.8425865066315 2741.6828161672133 2885.877060832047 0.7720200294268588 0.9382408712668803 1.1218769289505122 1.0278172856119099 0.9031396827076018 1.0235767874593562 0.949267780155633 1.0601982653094129 0.7040641523103611 0.9500345158073851 1.0 11.494794126588996 -8.735700608130752 24.999434994716225 0.8602524321010526 0.9784110539492716 0.10447391005214335 0.11056204277340995 325.96713942990027 316603.75081399817 0.022405881864035186 0.025401680369099355 1.837804843934205e-09 8.735700608130752 0.11815862184821901 LGRGS(ph)VSDCSDGTSELEEPLGEDPR ddPTM_A549_MK2206_60min_R1 2 LGRGSVSDCSDGTSELEEPLGEDPR 25 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 LGRGS(0.919)VS(0.052)DCS(0.021)DGT(0.003)S(0.005)ELEEPLGEDPR;LGRGS(0.936)VS(0.049)DCS(0.015)DGTSELEEPLGEDPR 128.35 4.7721e-24 41038000.0 1561.08 1940.6799999999998 1282.4 1665.21 1844.9 1661.19 1772.81 1854.4499999999998 2545.2 2424.71 2588.8 True False 1824.5521392583466 2039.452322685519 1464.2636033042813 2073.186524754117 1573.5176539242516 1836.976023191323 2094.906629375669 2117.323966514939 1968.7162638492155 1876.9663269657685 1945.9295127547682 0.9376249896510419 1.0480607387460579 0.7524751506704818 1.0653965167624166 0.808620067484711 0.9440095394775094 1.0765583314526128 1.088078449212446 1.011709957089961 0.9645602857981369 1.0 10.926243737103361 -7.5924013854419 8.280677713049469 1.0178542122937306 0.9228309257324016 0.23951618326161705 0.09038926330694261 0.29832860219882945 31.775623525935714 0.012494832379582394 0.01855151251690648 2.5562222725003196e-08 7.5924013854419 -0.09502328656132908 LGRGS(ph)VSDCSDGTSELEEPLGEDPR ddPTM_A549_PD325901_60min_R1 1 LGRGSVSDCSDGTSELEEPLGEDPR 25 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 LGRGS(0.945)VS(0.05)DCS(0.003)DGT(0.002)SELEEPLGEDPR 94.73 3.7957e-09 15377000.0 2060.0 1641.7 1411.6 1464.9 2063.6 2095.6 1780.6 2121.2 1827.5 2529.8 2997.8 True False 2269.129683508151 1780.051820546652 1507.3996646403718 1555.3835459707136 1918.659855033524 2078.5341283939647 1848.3617073817074 2078.8910019507916 1750.6965303024406 2370.067996261631 2629.089604619921 0.8630857158769953 0.677060157028763 0.5733542371441128 0.5916053767195852 0.7297810815051694 0.790590828377054 0.7030424920222219 0.7907265687322704 0.6658945846600512 0.9014785924743193 1.0 11.360347597381777 -10.933764723615962 0.628986259734511 1.0601876419977025 0.6987643790351373 0.5237147826985598 0.08647828404068632 0.6458235287061954 0.3282442274206215 0.13675189219245534 0.01730617001508232 1.1647568584379512e-11 10.933764723615962 -0.3614232629625652 LGS(ph)ALLIR ddPTM_A549_MK2206_60min_R1 2 LGSALLIR 8 0 Q14993 Q14993 COL19A1 Collagen alpha-1(XIX) chain 1 LGS(1)ALLIR;LGS(1)ALLIR 117.89 0.0012545 32685000.0 7025.5 6814.8 5374.700000000001 5438.7 8178.700000000001 6250.4 5316.2 5513.8 8472.8 8469.8 8826.4 True False 8211.232643016067 7161.644211635754 6136.9132787582075 6771.181744152522 6975.624064258377 6911.813179320271 6282.084725992589 6295.39803530431 6553.724328281334 6556.466297468426 6634.561283752584 1.2376451572049838 1.0794450311543502 0.9249915731107843 1.0205922373095728 1.0514069832079211 1.0417890322675367 0.946872665322547 0.9488793254078679 0.9878157798211599 0.9882290655034862 1.0 12.695785353922862 -5.3791109152371455 3.0794038076900216 0.9932598996487435 1.248353910008878 0.782228406680066 0.03833664410905027 0.09695931251365432 1.4553711051704374 0.0052237766264334575 0.050573677400569256 4.177236698343641e-06 5.3791109152371455 0.25509401036013457 LGS(ph)ALLIR ddPTM_A549_PD325901_60min_R1 2 LGSALLIR 8 0 Q14993 Q14993 COL19A1 Collagen alpha-1(XIX) chain 1 LGS(1)ALLIR;LGS(1)ALLIR 107.69 0.0018082999999999999 44584000.0 5002.1 4769.1 4562.7 5376.0 6400.3 5306.5 4741.7 5309.299999999999 5744.7 5480.7 6196.8 True False 5509.909509648604 5171.008794157909 4872.352259743994 5708.063310218143 5950.76500783633 5263.285623364468 4922.147988257798 5203.401846434725 5503.270236732381 5134.647666657884 5434.632884751727 1.0138512805728028 0.9514918309692115 0.8965375146892889 1.0503125843575554 1.0949709270211694 0.968471235312321 0.905700181160012 0.9574523167947956 1.0126296207004586 0.9448011991876158 1.0 12.40796686761726 -7.96633003852496 0.15777773338293574 1.0151909023972185 0.9650363835211414 0.0 0.05918369865849964 21.255824928743003 2.1001629355361864 0.236541589770666 0.3582850676383115 1.0806124366389184e-08 7.96633003852496 -0.05015451887607714 LGS(ph)DFGSSR ddPTM_A549_MK2206_60min_R1 2 LGSDFGSSR 9 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 LGS(1)DFGSSR;LGS(0.998)DFGS(0.002)SR 125.54 7.2851e-05 15745500.0 4698.0 5002.6 4312.200000000001 3898.0 5667.6 4920.6 5014.6 5151.1 7021.0 6259.799999999999 5877.3 True False 5490.90754492769 5257.2109721677825 4923.734802065443 4853.010174987867 4833.9035478243195 5441.294625970074 5925.687909966227 5881.284199582142 5430.754710233127 4845.706832380085 4417.804204771942 1.2429042326042026 1.190005425430386 1.1145208284122265 1.098511828511058 1.0941869136262135 1.2316740112865565 1.3413197224914422 1.3312686409301266 1.2292882297425123 1.09685866728678 1.0 12.109113765133456 -10.6440076281993 1.0058751785928945 1.0045428264629048 1.2056485795146281 0.3326041119886246 0.08376931630280923 0.4052529910432621 0.7540717091739715 0.05498255241573005 0.016150158736383338 2.2698249830157306e-11 10.6440076281993 0.2011057530517233 LGS(ph)DFGSSR ddPTM_A549_PD325901_60min_R1 2 LGSDFGSSR 9 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 LGS(1)DFGSSR;LGS(0.933)DFGS(0.065)S(0.003)R 135.56 4.5264e-05 31614000.0 4284.7 3640.3999999999996 3988.2 4350.1 4645.4 3829.3999999999996 4447.9 4051.2 4278.7 4793.1 4730.5 True False 4719.67958977057 3947.189283984911 4258.863234994848 4618.795797206091 4319.123129759996 3798.2146360335237 4617.1672684842715 3970.3956378950793 4098.881118580053 4490.462848004435 4148.6784891101925 1.1376344544797072 0.9514329187826515 1.0265589985278152 1.113317363427873 1.0410840804119195 0.9155239785400107 1.1129248218688936 0.9570265925202242 0.9879968113555071 1.0823839108746043 1.0 12.018436141404289 -7.026268405288154 24.944975709185783 0.9953385641835117 1.0512015453842642 0.07813769954840588 0.06822908107330743 966.53157469222 917835.344709731 0.008454665420968491 0.01467645856561979 9.413076640917839e-08 7.026268405288154 0.055862981200752504 LGS(ph)EIRDSVV ddPTM_A549_MK2206_60min_R1 3 LGSEIRDSVV 10 1 Q9NPR2 Q9NPR2 SEMA4B Semaphorin-4B 1 LGS(0.999)EIRDS(0.001)VV;LGS(1)EIRDSVV;LGS(0.997)EIRDS(0.003)VV 50.284 0.022826 183907700.0 2655.6499999999996 2566.46 2430.89 2018.52 3573.2200000000003 2644.34 2558.95 2190.18 3715.7 4084.4000000000005 3661.2 True False 3103.8587955911485 2697.0818517630287 2775.626755018985 2513.057490614805 3047.6040714159103 2924.1623036291685 3023.8780914146837 2500.644722144945 2874.099882753627 3161.731203261004 2752.0229960204565 1.1278462425929803 0.9800360882387701 1.0085768756411777 0.9131673297239137 1.1074050165361542 1.0625500978217235 1.0987837295645209 0.9086569137543489 1.0443589631735268 1.1488752847752373 1.0 11.426276809973196 -5.248389123921662 23.745713339604677 1.017736398318549 1.1278463870006536 0.12297867824221254 0.07334624226517379 1256.3392365527754 2285903.435513867 0.00796212377935848 0.19679964073457706 5.644310230983638e-06 5.248389123921662 0.11010998868210464 LGS(ph)EIRDSVV ddPTM_A549_PD325901_60min_R1 2 LGSEIRDSVV 10 1 Q9NPR2 Q9NPR2 SEMA4B Semaphorin-4B 1 LGS(1)EIRDSVV;LGS(0.988)EIRDS(0.012)VV 78.342 0.0011114 213450000.0 1770.3 1705.83 2001.87 1917.83 2065.14 1639.9199999999998 1521.63 2061.95 2097.7599999999998 2193.89 2458.36 True False 1950.019552774021 1849.5862807109045 2137.728936422231 2036.2900033920507 1920.091690746235 1626.5650352337439 1579.5364623178857 2020.822789681518 2009.598442356906 2055.367410988389 2155.997304828015 0.9044628898223855 0.8578796812820909 0.9915267202028153 0.9444770635065737 0.8905816748687456 0.7544374158498754 0.7326245068956087 0.9373030222051786 0.9320969176801511 0.9533255938612348 1.0 11.074139659267493 -9.12561086350071 1.3499474796401705 0.9789542579487576 0.8741055938520713 0.22634476819656735 0.07345019279853066 0.4005984088249696 1.5032766921755907 0.017737205409098056 0.016326770957118472 7.48840175698273e-10 9.12561086350071 -0.10484866409668625 LGS(ph)FGSITR ddPTM_A549_MK2206_60min_R1 2 LGSFGSITR 9 0 Q14315-2;Q14315 Q14315-2 FLNC Filamin-C 1 LGS(1)FGSITR;LGS(1)FGSITR 104.43 0.00060979 52579000.0 1335.21 1813.6 1443.3400000000001 1487.91 2773.6 2427.27 2685.3 2550.81 3909.3 4316.9 4050.2 True False 1560.5608052496605 1905.904493488083 1648.0273153409248 1852.448016794818 2365.6071141657035 2684.122100308574 3173.1842509137923 2912.3951290280006 3023.849791869301 3341.709291782742 3044.4235601666237 0.5125964815369678 0.6260313178576805 0.5413265541969222 0.6084725006836539 0.7770295648468283 0.8816519933125434 1.0422939476726825 0.9566326995802789 0.9932421465375216 1.0976492678304748 1.0 11.571953374660586 -7.067387916208704 1.4238873040674063 0.9966221609539746 0.5600097456095285 0.9464803872690299 0.04770432334883795 0.04427988187749951 0.17700995913417483 0.005171383731141665 0.011340343419455992 8.56272672169522e-08 7.067387916208704 -0.43661241534444606 down LGS(ph)GPDR ddPTM_A549_MK2206_60min_R1 2 LGSGPDR 7 0 Q6NUJ5-2;Q6NUJ5 Q6NUJ5-2 PWWP2B PWWP domain-containing protein 2B 1 LGS(1)GPDR;LGS(1)GPDR 65.404 0.02505 11180000.0 2373.0 2666.5 2112.2 1474.6 2945.2 2135.0 2232.7 1936.5 2907.3 2767.9 2674.9 True False 2773.5043857201795 2802.2134604576418 2411.741720913368 1835.8770661973094 2511.9649814828467 2360.924282901698 2638.3526894630872 2211.0048052825264 2248.8011920040976 2142.6294676099633 2010.6485065156548 1.379407875982517 1.3936863909215669 1.1994845011934911 0.9130770794835668 1.2493307374922265 1.1742103481791812 1.3121899133107109 1.0996476003227824 1.118445707798599 1.0656409912854556 1.0 10.973445182203614 -2.0000000000000004 0.1183312968545182 0.9467434481459314 2.1624009046689108 0.37044887057506715 0.11586855624609724 65.1880208716634 0.5127385966908888 0.4505812672371937 13.122125963362853 0.00999999999999999 2.0000000000000004 1.2156574565229794 LGS(ph)GPDRELR ddPTM_A549_MK2206_60min_R1 2 LGSGPDRELR 10 1 Q6NUJ5-2;Q6NUJ5 Q6NUJ5-2 PWWP2B PWWP domain-containing protein 2B 1 LGS(1)GPDRELR;LGS(1)GPDRELR 63.091 0.0018712 3697600.0 1050.13 1205.01 765.71 815.5899999999999 811.14 516.41 571.95 547.12 1092.19 1221.9699999999998 1224.8899999999999 True False 1227.3662707864862 1266.3398619861475 874.2991918949796 1015.4095866132265 691.8223805106608 571.0561634347852 675.8659115592835 624.675935484728 844.8107088690379 945.9261283049768 920.716007755789 1.3330562958041166 1.3753859510630253 0.9495861748141551 1.1028477598518673 0.7513960598957675 0.6202305147563507 0.7340655597013911 0.6784675515823304 0.9175584021051535 1.0273809951568418 1.0 9.846612419507762 -5.84171820334372 1.7647981748559614 0.8896057558852899 1.3932109825949155 0.6014935211744951 0.15095374396012756 0.24696312526297856 1.3868708445653877 0.024095447990090963 0.14266779650229985 1.4397324611708375e-06 5.84171820334372 0.5036052267096256 LGS(ph)LSAR ddPTM_A549_MK2206_60min_R1 2 LGSLSAR 7 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4;Q00G26 H0Y2V6 CEP170;PLIN5 Centrosomal protein of 170 kDa;Perilipin-5 1 LGS(0.5)LS(0.5)AR;LGS(0.5)LS(0.5)AR 121.67 0.0064759 91493000.0 7800.2 7765.7 7299.700000000001 6497.8 11561.5 9051.1 7926.2 9077.4 12981.5 10369.400000000001 10546.7 True False 9116.683063419538 8160.940960013461 8334.907224766273 8089.761291697328 9860.818665426443 10008.88139436607 9366.28794160537 10364.149248371605 10041.210977195746 8026.945338138937 7927.6633158879495 1.149983633279261 1.0294257758976717 1.0513699803651047 1.0204471316894241 1.2438493251427856 1.2625260427378544 1.181468935850776 1.3073397337145558 1.2666041148685014 1.0125234912602827 1.0 12.952679977911378 -6.747219800589261 24.995465288751355 1.1641492520483168 1.0596053750372139 0.23903279311092474 0.09906204805663715 377.99016831590484 664435.214365531 0.017502361405535356 0.036298897974568145 1.789699840584277e-07 6.747219800589261 -0.1045438770111029 LGS(ph)LSAR ddPTM_A549_PD325901_60min_R1 2 LGSLSAR 7 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4;Q00G26 H0Y2V6 CEP170;PLIN5 Centrosomal protein of 170 kDa;Perilipin-5 1 LGS(0.992)LS(0.008)AR;LGS(0.974)LS(0.026)AR 88.948 0.012719 15176500.0 2768.8999999999996 2946.3999999999996 3188.4 3455.4 3967.3 2974.2 3191.6 3379.2 3767.9 5122.4 4897.5 True False 3049.996689643556 3194.7034683916972 3404.783997406747 3668.832210217222 3688.6505344419934 2949.979101292866 3313.058084510535 3311.799205068882 3609.548266225204 4798.970789805749 4295.138547810414 0.7101043786348616 0.7437952077285844 0.7927064422968255 0.8541825064263708 0.8587966356341177 0.6868181476466488 0.7713506904682909 0.7710575964440494 0.8403799379336175 1.1173029080172932 1.0 12.068488953631224 -9.969342293741029 0.5781274221964826 1.0035061182415685 0.7719765754168567 0.7238397773518864 0.06407847959797626 0.3409657787028811 0.2257510160594843 0.036535225285068994 0.013378748627449893 1.0731432698378884e-10 9.969342293741029 -0.23152954282471183 LGS(ph)LSARS(ph)DSEATISR ddPTM_A549_MK2206_60min_R1 1 LGSLSARSDSEATISR 16 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 2 LGS(0.987)LS(0.274)ARS(0.656)DS(0.082)EATISR 83.395 4.6588e-05 17130000.0 917.58 953.65 776.28 470.74 686.86 640.46 528.66 608.54 1046.8 1267.9 1124.4 True False 1072.4450713228505 1002.1867116315133 886.3681768348783 586.0713211323215 585.82380387794 708.2330520970593 624.7106789141194 694.802408575589 809.7014713961022 981.4805094052073 845.1804481386979 1.268894794815293 1.1857665588911612 1.0487324674711611 0.6934274478580278 0.6931345905694729 0.8379666775973916 0.7391447356477436 0.822075818371947 0.9580220095948393 1.1612674093049322 1.0 9.723115583053726 -2.780593418870563 15.218013274829712 0.9431220628938186 1.133844793692904 0.0 0.19525275406170248 0.0 0.0 0.02542983519911675 0.0 0.0016573208006808685 2.780593418870563 0.1907227307990853 LGS(ph)LSER ddPTM_A549_MK2206_60min_R1 2 LGSLSER 7 0 O60664-2;O60664-4;O60664-3;O60664 O60664-2 PLIN3 Perilipin-3 1 LGS(0.994)LS(0.006)ER;LGS(0.999)LS(0.001)ER 93.162 0.012184 12220700.0 1451.92 1528.75 1604.04 1460.37 1865.46 2031.04 2184.8 2060.39 3434.0 3159.0 3045.3 True False 1696.9685999641144 1606.5568451808053 1831.5169917687142 1818.1607155584995 1591.0533051599202 2245.963304704762 2581.749879490729 2352.4565921797384 2656.2044829711663 2445.379705979216 2289.06796399571 0.7413360488440677 0.7018388577578364 0.8001147281672177 0.7942799183580321 0.6950659963728809 0.9811693405486719 1.1278607363776672 1.027691894334749 1.1603869018963493 1.0682861952734046 1.0 11.160544582795508 -7.40978415827979 3.889629667591411 1.0763860078806762 0.7502878185578516 0.9047032681413588 0.051400496441641685 0.06571665125594515 1.7568362763720864 0.010012551953211955 0.0162437939004685 3.8923854612444034e-08 7.40978415827979 -0.3260981893228245 LGS(ph)LSER ddPTM_A549_PD325901_60min_R1 1 LGSLSER 7 0 O60664-2;O60664-4;O60664-3;O60664 O60664-2 PLIN3 Perilipin-3 1 LGS(0.993)LS(0.007)ER 88.819 0.012735 10618000.0 1863.2 2054.9 1682.4 1925.3 1949.9 1942.8 1960.9 1820.6 2481.7 2248.6 2361.5 True False 2052.3506923846558 2228.0736346721783 1796.57778109306 2044.2214083264507 1812.9457507898164 1926.9784809332866 2035.523122545653 1784.2867047669304 2377.40277934422 2106.623012251523 2071.0504707818877 0.9909708726749802 1.0758181252004975 0.8674717523493256 0.9870456742440912 0.875374973409205 0.9304353071636109 0.982845735177655 0.8615370460253946 1.1479212181858005 1.0171760862284567 1.0 11.01614699662684 -8.763770044401465 24.999795634185272 1.0698516832029432 0.9477830030162828 0.3161044024892524 0.07020109858186045 50.57080707776437 542443.9923218662 0.013282874286015343 0.014470946847979596 1.7227805326112839e-09 8.763770044401465 -0.1220686801866604 LGS(ph)PAPQGCYAEALNGAAR ddPTM_A549_PD325901_60min_R1 1 LGSPAPQGCYAEALNGAAR 19 0 A0A2U3U043 A0A2U3U043 1 LGS(0.999)PAPQGCY(0.001)AEALNGAAR 48.31399999999999 0.031267 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LGS(ph)PDEEFFHK ddPTM_A549_MK2206_60min_R1 1 LGSPDEEFFHK 11 0 Q12846;H3BMK2;A0A087WWW0;C9JFM5 Q12846 STX4 Syntaxin-4 1 LGS(1)PDEEFFHK 92.925 8.9744e-05 1579400.0 355.66 390.34 485.14 230.22 322.67 425.57 272.46 411.13 623.48 536.0 550.56 True False 415.68671294784616 410.20663872305835 553.9401469955077 286.6239103349688 275.20567043836434 470.6035349294969 321.9624552206353 469.4089365328193 482.26277549297083 414.9172277318327 413.840757317006 1.0044605457490647 0.9912185580330265 1.338534538228636 0.6925946883366351 0.665003786051827 1.1371609166300893 0.7779863378077306 1.1342743029373676 1.165334170127552 1.0026011706092113 1.0 8.692931926523002 -8.309166374920395 24.98893892695632 1.0844709551607807 0.9478993500288394 0.10069933542388854 0.18839745594668436 708.8574112398093 371142.4653624949 0.031173796941111304 0.03768732383616424 4.907198490886498e-09 8.309166374920395 -0.13657160513194133 LGS(ph)PDEEFFHK ddPTM_A549_PD325901_60min_R1 2 LGSPDEEFFHK 11 0 Q12846;H3BMK2;A0A087WWW0;C9JFM5 Q12846 STX4 Syntaxin-4 1 LGS(1)PDEEFFHK;LGS(1)PDEEFFHK 93.01100000000001 8.9668e-05 8556900.0 1645.77 1173.37 1321.53 1803.5 1530.71 1211.49 1442.22 1483.4 1600.79 1474.1 1710.29 True False 1812.84735884816 1272.2540078423735 1411.2169728054632 1914.8980989543202 1423.198210262825 1201.6240271082288 1497.1044713130657 1453.8124232952132 1533.5143631971785 1381.0250744285192 1499.935172421577 1.2086171403804076 0.8482059966554271 0.9408519773072044 1.2766539075570877 0.9488398141668591 0.8011173077355481 0.9981127843652462 0.9692501716244839 1.0223870947178266 0.9207231751215736 1.0 10.550684433085248 -5.229894350416013 23.244705241807786 0.9951076538488836 1.2086181093756379 0.2323823598128114 0.11698633921782468 5757.534583184842 4242396.206426558 0.015027409864214763 2.472502150730559 5.889869191026199e-06 5.229894350416013 0.2135104555267543 LGS(ph)PDTVSPR ddPTM_A549_MK2206_60min_R1 2 LGSPDTVSPR 10 0 H0Y9Y2 H0Y9Y2 BOD1L1 1 LGS(0.803)PDT(0.195)VS(0.002)PR;LGS(0.673)PDT(0.326)VS(0.001)PR 78.342 0.001338 5296700.0 1885.53 2402.3 1959.46 2067.3 2863.0 2377.8999999999996 2304.8 2357.0 2808.6000000000004 3337.7 3307.1000000000004 True False 2203.761367217435 2524.566808947082 2237.3408921792 2573.7885928046226 2441.856492593167 2629.527799677727 2723.55232618557 2691.1119680097677 2172.456584412584 2583.7112518666763 2485.855798683288 0.8865201949303442 1.0155725083829474 0.9000284301946551 1.0353732481859612 0.9823001373959718 1.0577957905163042 1.0956195961278952 1.082569620263251 0.8739270337254857 1.0393648952747865 1.0 11.2795268945849 -4.299784286391684 16.216064592027116 0.9715777134687854 0.9842604264918715 0.0 0.07894313055593352 0.0 0.0 0.011263012454257369 0.0 5.014362346285342e-05 4.299784286391684 0.0126827130230861 LGS(ph)PDYGNSALLSLPGYRPTTR ddPTM_A549_MK2206_60min_R1 1 LGSPDYGNSALLSLPGYRPTTR 22 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 LGS(1)PDYGNSALLSLPGYRPTTR 175.85 5.6968e-41 31314000.0 4715.4 4727.0 4898.8 4139.4 5635.0 5256.8 4465.8 5154.6 7447.5 7653.6 7775.4 True False 5511.244239538534 4967.58410935056 5593.523502703534 5153.553185824725 4806.098964639362 5813.07108681857 5277.1780537484865 5885.280335300444 5760.6531412136765 5924.6464443439445 5844.553589876941 0.9429709480437111 0.8499509899190014 0.9570488860589449 0.8817701996523629 0.8223209678432525 0.994613360528869 0.9029223485757445 1.0069683244061691 0.9856446780112369 1.013703844653889 1.0 12.512877119809792 -7.917564039702642 1.2709246587599619 0.9944505714759262 0.8960667403879807 0.4786868415342813 0.04647519532851865 0.2556118233470708 0.8312320909120116 0.007435547328402765 0.011238983771240947 1.2090268904837446e-08 7.917564039702642 -0.09838383108794546 LGS(ph)PDYGNSALLSLPGYRPTTR ddPTM_A549_PD325901_60min_R1 2 LGSPDYGNSALLSLPGYRPTTR 22 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 LGS(0.999)PDYGNSALLSLPGYRPTTR;LGS(1)PDYGNSALLSLPGYRPTTR 323.61 1.864599999999999e-196 106240000.0 20056.1 21289.4 19473.5 20727.2 25120.2 24385.5 24668.9 24298.6 24845.2 23592.1 25187.5 True False 22092.180507479523 23083.5324531558 20795.088813668375 22007.472069113388 23355.843811985415 24186.912572986763 25607.688488840053 23813.94536111707 23801.04264551036 22102.490779747015 22089.59717671767 1.0001169478438736 1.0449956270585927 0.9413973757559644 0.9962821817461279 1.0573232107918364 1.094945841677894 1.159264620535065 1.0780615495431873 1.0774774413087327 1.0005836957064538 1.0 14.43107948966633 -6.759767560139223 22.205603267607383 1.0556856167411937 0.995340622525981 0.32631501659151774 0.047467238519271246 13.229044112034059 175683.3388763977 0.00784298191105837 0.01566229564744369 1.7387311705200855e-07 6.759767560139223 -0.060344994215212666 LGS(ph)PGAPQQEDAMDDKELIEYFK ddPTM_A549_PD325901_60min_R1 1 LGSPGAPQQEDAMDDKELIEYFK 23 1 H0YGG4 H0YGG4 EIF2B1 1 LGS(1)PGAPQQEDAMDDKELIEYFK 110.9 2.4191e-11 22039000.0 5421.0 5937.8 5276.7 5560.0 7178.8 6933.5 6341.6 6832.2 6798.5 7022.8 5921.9 True False 5971.335929270723 6438.1992447109105 5634.808593374789 5903.428572323827 6674.585853515529 6877.035874794595 6582.933058256674 6695.926411242783 6512.78268742059 6579.379209481454 5193.543842017048 1.1497613404090568 1.2396543555913198 1.0849640948032055 1.1366859993678378 1.285169829417148 1.3241509235288786 1.2675223813456864 1.289278884501001 1.2540151552646144 1.266838099305653 1.0 12.342503589829752 -10.675066025619996 0.9365357369418155 0.9998197059692111 1.227140252146293 0.0 0.1041321452438264 0.34537226207227517 0.5384322451836485 0.052425833931021744 0.013839214517738445 2.1131677513489504e-11 10.675066025619996 0.22732054617708197 LGS(ph)PHRRPLSVDK ddPTM_A549_MK2206_60min_R1 2 LGSPHRRPLSVDK 13 2 M0QXN6;M0QX46;Q6UUV9-3;Q6UUV9;Q6UUV9-2 M0QXN6 CRTC1 CREB-regulated transcription coactivator 1 1 LGS(0.994)PHRRPLS(0.006)VDK;LGS(1)PHRRPLSVDK 71.697 0.00043315 25997000.0 3406.9 3942.8999999999996 3537.6 2854.3999999999996 5365.6 4002.4 3725.1000000000004 3346.8999999999996 6285.4 6623.5 6411.9 True False 3981.9014292920724 4143.576768512441 4039.2848744925323 3553.728128138887 4576.327347767343 4425.931311421899 4401.902451524588 3821.3333244513747 4861.766935721308 5127.24674977947 4819.648270562537 0.8261809173114858 0.8597259666894351 0.8380870652250061 0.7373417993682981 0.94951479669557 0.9183100224252083 0.9133244179685357 0.7928656013741349 1.0087389499802348 1.063821769131097 1.0 12.234712149617181 -8.447217985746152 0.6295922463838906 1.0117462773561499 0.836181240485591 0.5248099099871344 0.06587717836483846 0.38562799873530296 0.3236618974966554 0.01798925186421286 0.02206285706957336 3.570935569327589e-09 8.447217985746152 -0.1755650368705589 LGS(ph)PHRRPLSVDK ddPTM_A549_PD325901_60min_R1 2 LGSPHRRPLSVDK 13 2 M0QXN6;M0QX46;Q6UUV9-3;Q6UUV9;Q6UUV9-2 M0QXN6 CRTC1 CREB-regulated transcription coactivator 1 1 LGS(1)PHRRPLSVDK;LGS(1)PHRRPLSVDK 70.235 0.00059317 47164000.0 3901.9 3882.7 4617.1 4732.700000000001 4935.9 5119.700000000001 5291.0 4946.799999999999 4858.2 4616.6 4931.5 True False 4298.0180155730395 4209.908755336836 4930.444170877771 5025.02813025845 4589.219411930591 5078.006860631123 5492.351900346297 4848.132193310473 4654.026748845588 4325.107088126118 4324.956763354174 0.9937713255287569 0.9733990385771827 1.1399984879973732 1.161867830179496 1.0611018012516433 1.17411737006428 1.269920649122689 1.1209666266236973 1.0760863064064965 1.0000347575201716 1.0 12.078469994843516 -9.679972732767455 1.1068758403347163 1.0146547125171788 1.1126606909692554 0.212166063353321 0.07944221913566293 0.5304348364617855 1.336862078182491 0.024650456186452042 0.0166956530599641 2.0894273116870453e-10 9.679972732767455 0.09800597845207659 LGS(ph)PKPER ddPTM_A549_MK2206_60min_R1 8 LGSPKPER 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER 80.737 0.0016928000000000002 3027880000.0 50392.60000000001 54580.99999999999 52984.6 47855.4 67639.7 50481.70000000001 47629.4 49802.1 70622.5 70277.7 72127.4 True False 58897.63889921735 57358.93976569977 60498.61300345916 59579.97514831055 57689.98973176876 55823.639986959584 56283.04545506028 56861.70018753465 54626.61651095845 54401.91876001757 54216.175965029506 1.0863480843283282 1.0579672716625643 1.1158775388821585 1.098933557887609 1.064073382249975 1.029649159006842 1.0381227457164066 1.04879584691129 1.0075704444037825 1.0034259663593366 1.0 15.726435738559708 -7.75941019553557 0.6190178281227189 1.0013997831707675 1.09184483617382 0.766446527714515 0.018049006361109437 0.24351894500396942 0.18990344896730588 0.00434435947552567 0.008650090662141717 1.740162495851041e-08 7.75941019553557 0.0904450530030525 LGS(ph)PKPER ddPTM_A549_PD325901_60min_R1 5 LGSPKPER 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER 99.34299999999999 0.0007004 2128890000.0 43416.6 43235.5 43479.600000000006 43878.49999999999 48343.700000000004 45501.299999999996 43745.1 45557.4 43281.4 47977.1 48774.200000000004 True False 47824.221270388385 46879.107320000476 46430.38712007473 46588.77528969621 44948.20528871107 45130.75249870796 45409.84371873721 44648.721917911105 41462.43327312286 44947.817718176884 42775.28260512806 1.1180340224018774 1.0959391607708615 1.0854489857773257 1.0891517823452317 1.050798558215078 1.0550661445144378 1.0615907354237635 1.0437972398704491 0.9693082254038033 1.0507894975961742 1.0 15.384489765805224 -8.03751552756939 0.8070948399626154 0.9849417854635601 1.093102702638842 0.5474002923559262 0.02743634971722087 0.17738440948733572 0.23211969189910936 0.0047290554142780244 0.007257604199839348 9.172431401052137e-09 8.03751552756939 0.10816091717528187 LGS(ph)PLAVDEALR ddPTM_A549_MK2206_60min_R1 2 LGSPLAVDEALR 12 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALR;LGS(1)PLAVDEALR 149.69 3.8724e-12 26022000.0 1354.8400000000001 1332.27 1411.62 1101.06 1744.01 1686.55 1290.48 1665.1399999999999 2062.14 1757.38 1677.96 True False 1583.5038693422373 1400.076852414738 1611.8089423708582 1370.8197494284623 1487.4684392760764 1865.019601558717 1524.9435117563155 1901.1786942773801 1595.0685825609087 1360.3866374465822 1261.2762226599157 1.2554774607601602 1.1100477653198793 1.27791907388193 1.0868513373997724 1.179335987274177 1.4786765722305952 1.2090480137176849 1.5073452270970185 1.2646465174750188 1.0785794681657057 1.0 10.300668548767277 -10.495847570231525 0.9752763114395573 1.010297759716106 1.2601788701197079 0.31059316495781375 0.12666834611128475 0.4347660098433398 0.7817683000621202 0.06822074908100964 0.023031755450419383 3.192658225679999e-11 10.495847570231525 0.24988111040360184 LGS(ph)PLAVDEALR ddPTM_A549_PD325901_60min_R1 2 LGSPLAVDEALR 12 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALR;LGS(1)PLAVDEALR 132.79 5.5666000000000004e-08 65525000.0 1325.39 1455.73 1529.99 1241.1100000000001 1744.53 1512.25 1461.24 1134.37 1294.69 1613.78 1489.7800000000002 True False 1459.9426170994518 1578.4094759848786 1633.8243219772758 1317.7705459346805 1622.000231101779 1499.9347373848905 1516.8482878212094 1111.74410045395 1240.2786817057538 1511.8856553905819 1306.5465044935167 1.1174057808722233 1.2080775315355112 1.2504907528038034 1.0085906176340158 1.241440871429638 1.148014810208643 1.1609600443646024 0.8509028164174823 0.9492801652602089 1.157161762088725 1.0 10.351542760723119 -8.236224603122 23.684708559644648 0.9659937912561873 1.1639060330453923 0.441858969720172 0.09206368605582006 181.48312538594615 170470.52733822234 0.011116520081042771 0.014347532449778731 5.804641425178345e-09 8.236224603122 0.19791224178920497 LGS(ph)PLAVDEALRR ddPTM_A549_MK2206_60min_R1 2 LGSPLAVDEALRR 13 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR 124.16 1.9646000000000002e-06 45458000.0 631.1 595.6600000000001 652.8399999999999 973.46 871.5999999999999 688.6199999999999 550.52 675.71 1287.08 954.6000000000001 1147.54 True False 737.6142510863914 625.9765497304323 745.422528681509 1211.9577437002804 743.3887946015379 761.4893113310388 650.5423579536968 771.4939617750866 995.5584350444165 738.9551970015067 862.5741475071873 0.8551314147520812 0.725707525016238 0.8641837120156651 1.4050476091856 0.8618259621505104 0.8828102645224408 0.754187173165048 0.8944088621304968 1.1541714273741563 0.8566860010087997 1.0 9.752504667008633 -8.746049207996851 24.802109031385154 1.0728031734637895 0.9074556335860545 0.017644880433965504 0.18345648126936662 308.4409799466464 497069.2527993749 0.030460485114981745 0.03447558928135457 1.7945302849821914e-09 8.746049207996851 -0.16534753987773498 LGS(ph)PLAVDEALRR ddPTM_A549_PD325901_60min_R1 2 LGSPLAVDEALRR 13 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR 181.58 1.9287999999999997e-25 75986000.0 1506.84 1501.1599999999999 1241.17 1642.1799999999998 1598.9299999999998 1401.17 1113.6399999999999 1358.22 1358.08 1675.54 1543.8200000000002 True False 1659.8132875230208 1627.6680215214783 1325.4032599615268 1743.6137289386224 1486.6266728090468 1389.7593360764336 1156.0201796071901 1331.129236597023 1301.0046204504172 1569.7461184505548 1353.9399270813012 1.2259135389419331 1.20217152102919 0.9789232398358388 1.2878073052305534 1.0980004674312098 1.0264556855726594 0.8538194025337829 0.9831523614689085 0.9609027656455947 1.1593912603157133 1.0 10.402948014103409 -7.235103010661716 3.028206867942965 0.9720539975420849 1.1633722415047232 0.39895440489372347 0.09896873984838554 0.145101631182242 2.691771725877266 0.011581577275141471 0.02040222158451452 5.819651646078847e-08 7.235103010661716 0.1913182439626383 LGS(ph)PPPHK ddPTM_A549_PD325901_60min_R1 2 LGSPPPHK 8 0 E9PJM7;E7EMB1;Q9UH65 E9PJM7 SWAP70 Switch-associated protein 70 1 LGS(1)PPPHK;LGS(1)PPPHK 55.567 0.0063318 6001400.0 1210.1 1250.3 1099.1 1265.9 1561.9 1369.1 1313.6 1387.3 1502.3 1390.5 1736.1 True False 1332.9484611714636 1355.6671689282318 1173.6915354252146 1344.0917679325057 1452.1975322624837 1357.950503523659 1363.5897668295006 1359.629213184204 1439.1635553889764 1302.7035926957853 1522.5707060446473 0.8754591533119754 0.8903804358945014 0.7708617608138835 0.882777898324475 0.953780029063491 0.8918800934055532 0.8955838710255044 0.8929826429645854 0.9452195222694472 0.8555948091763598 1.0 10.572293511080328 -8.836064159528869 0.26755082881630193 1.0213146735979375 0.8398011590929152 0.0 0.057972200668100216 0.826820086938224 0.20186934968923825 0.0535738194790623 0.04552330264630313 1.4585987615153448e-09 8.836064159528869 -0.1815135145050223 LGS(ph)PSGK ddPTM_A549_MK2206_60min_R1 4 LGSPSGK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LGS(0.916)PS(0.084)GK;LGS(0.976)PS(0.024)GK;LGS(0.5)PS(0.5)GK;LGS(0.834)PS(0.166)GK 107.0 0.009368099999999999 1593100000.0 34657.5 30300.8 28105.5 22112.8 42983.600000000006 31565.0 32838.5 36377.8 44911.0 41312.0 44658.8 True False 40506.83870547709 31842.981294819005 32091.282519236192 27530.436992681298 36660.769380030615 34905.187348848776 38804.83038157102 41534.46455234013 34738.73020812989 31979.590507569923 33568.78743982254 1.2066816169065422 0.9485889638373944 0.955985752442354 0.8201200904868561 1.0921088360951658 1.039810788859203 1.1559795077833814 1.2372941568651339 1.034852100940633 0.9526584945881198 1.0 15.03483280499274 LGS(ph)PSGK ddPTM_A549_PD325901_60min_R1 1 LGSPSGK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LGS(0.686)PS(0.314)GK 99.13600000000001 0.011426 1268500000.0 3949.4 4016.6 3314.1 3272.8 4016.5 4081.9 3281.7 3646.2 3452.5 3954.8 5384.3 True False 4350.340180605386 4355.092978258925 3539.0147553022525 3474.9534229319083 3734.3948961727765 4048.6583597496306 3406.586889315145 3573.473680611435 3307.4034313921607 3705.0932530696114 4722.065233889862 0.9212791363794307 0.922285644637603 0.7494633343696829 0.735896954153124 0.7908393279642435 0.8573914503960582 0.7214188539510975 0.756760761152751 0.7004145998778685 0.7846340678393156 1.0 12.205202256757937 -10.939652760798651 1.2062665788786586 0.9996765766832529 0.7858444710515021 0.0 0.09548309288813683 0.3164848485562453 0.8204207739686681 0.055615272243992944 0.013115930671639688 1.1490719923007918e-11 10.939652760798651 -0.2138321056317508 LGS(ph)PVDNLEDMDRDDLTDDSVFTR ddPTM_A549_MK2206_60min_R1 1 LGSPVDNLEDMDRDDLTDDSVFTR 24 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 LGS(0.999)PVDNLEDMDRDDLT(0.001)DDSVFTR 69.016 4.0126e-05 13687000.0 509.1 625.69 753.63 442.73 840.36 1015.8 629.67 528.96 1040.9 1075.1 806.71 True False 595.0236337000184 657.534948461932 860.5060662493803 551.198869874905 716.7441572181606 1123.2912817665324 744.0728884195017 603.9416998720603 805.1378119757389 832.2341633106222 606.3816429366498 0.9812692066639327 1.0843582686269189 1.419083305493929 0.9089966299202269 1.1820017402687777 1.8524493524021233 1.2270702734601695 0.9959762253804831 1.3277740534435238 1.3724593628530537 1.0 9.24408226906683 -3.491470783934356 15.731732907041467 1.184205250321933 0.6481904417522302 0.0 0.26213558964352307 0.0 0.0 0.03384342142546354 0.0 0.00032249962655068706 3.491470783934356 -0.5360148085697027 LGS(ph)PVDNLEDMDRDDLTDDSVFTR ddPTM_A549_PD325901_60min_R1 4 LGSPVDNLEDMDRDDLTDDSVFTR 24 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(0.999)PVDNLEDMDRDDLT(0.001)DDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR 115.94 2.6879e-16 135127000.0 4358.05 4301.75 4265.5599999999995 4096.48 5596.6 4828.4 4423.71 4455.1 4175.96 4586.67 4863.5 True False 4800.476027773156 4664.27356949294 4555.046552496019 4349.510265818904 5203.514123221852 4789.079111250917 4592.056704796995 4366.239535541664 4000.458923492082 4297.066873434002 4265.320332266655 1.1254667067929482 1.0935341794163147 1.0679260167255478 1.0197382440224623 1.2199585770517327 1.122794711342566 1.076603009171109 1.0236604042401145 0.9379035129504981 1.0074429441857364 1.0 12.058438378941483 -8.345533686042325 2.508090308934314 0.9709521834728525 1.1057695121752122 0.5505022084157112 0.049258665623708356 0.14948970833378686 1.8418615911416072 0.008705121282597624 0.01081213356498831 4.513010188293309e-09 8.345533686042325 0.13481732870235974 LGS(ph)QHSPGR ddPTM_A549_MK2206_60min_R1 3 LGSQHSPGR 9 0 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 LGS(0.863)QHS(0.137)PGR;LGS(0.561)QHS(0.439)PGR;LGS(0.535)QHS(0.465)PGR 73.95100000000001 0.00067368 96781200.0 2955.81 3320.4700000000003 2346.55 1788.81 3349.01 2716.12 2316.82 2450.48 3145.55 3759.36 3996.2000000000003 True False 3454.6784653837212 3489.4677401259255 2679.3260748079097 2227.068530302731 2856.375065406722 3003.538015585461 2737.756204596169 2797.8430442802623 2433.0879474111666 2910.117965011086 3003.8332504908067 1.150089960825638 1.1616715873145653 0.8919689780949476 0.7414088414990554 0.9509099963987712 0.9999017139499013 0.9114208334130524 0.9314242206431109 0.8099943453963752 0.9688014354776824 1.0 11.552589012505246 -5.760206445624878 24.997503340790768 0.9066011191370063 1.1558808690396014 0.6153760913924203 0.0743471333344993 16.895425089332257 342507.6776269624 0.011917666112628404 0.04157931634541255 1.7369749464591255e-06 5.760206445624878 0.24927974990259516 LGS(ph)QHSPGR ddPTM_A549_PD325901_60min_R1 2 LGSQHSPGR 9 0 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 LGS(0.899)QHS(0.101)PGR;LGS(0.85)QHS(0.15)PGR 67.385 0.0015183 21845100.0 3036.8 2859.3 3101.4 2764.8 3500.2 3420.2 3252.1 3267.8999999999996 3200.8999999999996 3718.8999999999996 3770.4 True False 3345.093700425997 3100.263245714224 3311.8796542332466 2935.575416683618 3254.3580270344705 3392.3470251636973 3375.860445117403 3202.719170882045 3066.377304429592 3484.0880193285534 3306.66470253484 1.0116216796525206 0.9375801675136908 1.001577103264933 0.8877753509248305 0.9841814395453303 1.0259120081220132 1.0209261442593554 0.9685648407069782 0.9273323969252016 1.05365627686947 1.0 11.691161047604265 -5.221255832154788 21.841618201349885 0.9696948648644926 1.0116222936993393 0.0 0.04721063628942868 9343.518339869583 5078098.345302042 0.00583889442611058 1.8836342767125074 6.008197051660426e-06 5.221255832154788 0.04192742883484668 LGS(ph)SEEVR ddPTM_A549_PD325901_60min_R1 1 LGSSEEVR 8 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 LGS(0.98)S(0.02)EEVR 53.327 0.037866000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LGS(ph)SGLGSASSIQAAVR ddPTM_A549_MK2206_60min_R1 1 LGSSGLGSASSIQAAVR 17 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LGS(0.839)S(0.161)GLGSASSIQAAVR 120.63 8.644699999999999e-10 3959400.0 1508.8 1728.9 1760.6 1496.7 2074.5 1652.3 1739.9 1944.2 2458.9 2229.3 2461.0 True False 1763.44855338163 1816.893625271035 2010.2795539437916 1863.3915671894165 1769.3437980735332 1827.1452892920256 2056.017308369609 2219.796303862787 1901.9630760564362 1725.6995816839094 1849.865779855333 0.9532845964205787 0.9821759205757747 1.086716439557579 1.0073117668759413 0.9564714463834794 0.9877177626556862 1.1114413438851753 1.1999769540233263 1.0281627438965748 0.9328782663458244 1.0 10.853204882018906 LGS(ph)SGLGSASSIQAAVR ddPTM_A549_PD325901_60min_R1 2 LGSSGLGSASSIQAAVR 17 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LGS(0.5)S(0.5)GLGSASSIQAAVR;LGS(0.5)S(0.5)GLGSASSIQAAVR 237.89 6.6394e-74 13203400.0 6143.200000000001 7058.6 6405.200000000001 6775.1 8649.2 8347.8 7970.299999999999 7757.2 8029.9 8278.1 8659.9 True False 6766.853141615187 7653.452994158855 6839.895389596562 7193.582539631499 8041.71003012015 8279.818284504263 8273.614128015512 7602.476560594323 7692.431227729441 7755.419353250614 7594.787199629075 0.8909865363898117 1.0077244816724615 0.9006039550299209 0.9471736798606851 1.0588459977539466 1.0901975350815154 1.0893806383962397 1.0010124524576045 1.012856716789265 1.0211503165789009 1.0 12.890793826698092 -6.677375061363969 7.281238189671901 1.0216821203059467 0.9382159363611864 0.5500419170572882 0.042798182906846796 0.17239331156105986 12.694749144634173 0.0065247494300278795 0.013617540366514537 2.1019623784814706e-07 6.677375061363969 -0.08346618394476035 LGS(ph)SSNLQFK ddPTM_A549_PD325901_60min_R1 3 LGSSSNLQFK 10 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 LGS(0.623)S(0.367)S(0.01)NLQFK;LGS(0.482)S(0.482)S(0.036)NLQFK;LGS(0.333)S(0.333)S(0.333)NLQFK 217.24 1.1174999999999998e-26 97458000.0 39139.1 37081.3 41029.8 40236.8 48147.1 41726.1 43609.4 43018.8 44816.8 41814.3 45453.8 True False 43112.47261931745 40206.27128783366 43814.328960230625 42722.13575159699 44765.41379447785 41386.29647584436 45268.97958097933 42160.756286404256 42933.30575062016 39174.13796192691 39863.27075537825 1.0815086620432626 1.008604425225422 1.0991152539664424 1.0717167693981313 1.1229739292889862 1.0382062407726698 1.1356062541574503 1.0576341451037614 1.07701412696618 0.9827125877934045 1.0 15.282772466770465 -10.568741725596455 0.7250880874211162 0.9964075978865375 1.0773843297904322 0.4706927031906726 0.03452822253253829 0.5719052595573129 0.5027989049508772 0.02693293604996652 0.006320226940835325 2.6993442519700077e-11 10.568741725596455 0.08097673190389465 LGS(ph)VDSFER ddPTM_A549_MK2206_60min_R1 3 LGSVDSFER 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 LGS(0.966)VDS(0.034)FER;LGS(0.994)VDS(0.006)FER;LGS(0.915)VDS(0.085)FER 167.09 6.476100000000001e-07 238658800.0 3376.1400000000003 4315.2 3524.83 3000.2 4143.5 3937.6899999999996 3586.65 4039.72 4988.4 5311.0 5313.5 True False 3945.9498933018667 4534.825248290569 4024.7038964714857 3735.249134684098 3533.996638861258 4354.373742172923 4238.2978786504145 4612.362681123642 3858.5353648379037 4111.241411350307 3994.011304860342 0.9879666310658688 1.1354062124892101 1.0076846531640493 0.9352124592483365 0.8848238948549573 1.0902256928702363 1.0611632154102313 1.1548196359661835 0.9660802312057613 1.0293514708752345 1.0 11.96362270092992 LGS(ph)VDSFER ddPTM_A549_PD325901_60min_R1 2 LGSVDSFER 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 LGS(0.944)VDS(0.056)FER;LGS(0.999)VDS(0.001)FER 138.22 4.3055e-05 230140000.0 3031.2799999999997 3393.7000000000003 2918.6000000000004 3519.3 3696.3 3772.7999999999997 3415.3 4902.0 5408.4 5919.5 6418.599999999999 True False 3339.0133140896087 3679.699009191186 3116.673746967547 3736.67916808979 3436.684639542744 3742.075567667854 3545.2711104238692 4804.225764455392 5181.103756217626 5545.741759771812 5629.1528908577675 0.5931644385627642 0.6536861017165365 0.553666565360002 0.6638084345085885 0.6105154196689555 0.664767086668637 0.629805439497246 0.8534544819803831 0.9204055844054596 0.985182294262886 1.0 12.458702117782865 -8.4415238746171 1.4327792786575821 0.9697301589935048 0.6169657762687119 0.9475265158279488 0.03636555288217146 0.05732094401601612 0.22810731784179958 0.006956614814233806 0.008431066331499357 3.6180630048587484e-09 8.4415238746171 -0.35276438272479294 LGS(ph)VEAPK ddPTM_A549_MK2206_60min_R1 2 LGSVEAPK 8 0 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 LGS(1)VEAPK;LGS(1)VEAPK 103.7 0.0021194000000000005 43620000.0 5330.3 5443.2 5690.4 5086.6 6235.4 4843.9 4999.799999999999 4836.2 8453.1 6792.0 7446.5 True False 6229.9243266769 5720.235630213023 6497.384285903524 6332.817228346153 5318.180919984432 5356.4782828794105 5908.198941540528 5521.746160241339 6538.486346826897 5257.682482751135 5597.328537055153 1.113017448490627 1.021958170285022 1.1608009504694725 1.1313999502480432 0.9501284201520919 0.956970498947618 1.0555390669722826 0.9864967052919178 1.1681441072363608 0.9393199716515637 1.0 12.45052271434487 -4.667294205311065 5.768599518579604 1.0634772089143643 5.229774719106889 0.0 0.08333580207456552 9243.326976993385 2313.757196517661 0.011763872558652516 498142.1093905369 2.1513238637050742e-05 4.667294205311065 4.166297510192525 LGS(ph)VEAPK ddPTM_A549_PD325901_60min_R1 2 LGSVEAPK 8 0 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 LGS(1)VEAPK;LGS(1)VEAPK 99.815 0.0024002 63965000.0 16177.800000000001 16083.0 16823.2 17385.6 19136.8 17618.0 17403.3 17574.0 18347.1 19434.1 21534.3 True False 17820.158346533102 17438.370853293407 17964.92351811981 18459.469026437615 17792.697186376008 17474.524849229274 18065.592104951163 17223.472783463698 17576.0351907589 18207.02760935575 18885.71761717484 0.9435785659702596 0.9233628928897464 0.9512438914040707 0.97743010885911 0.9421244957191974 0.9252772493716513 0.9565742997513715 0.9119840258439805 0.930652228686036 0.9640633190871243 1.0 14.205007983717765 -10.72778042658297 0.9675899040817284 1.0002349070971024 0.9402158468994055 0.3540409786478663 0.01981687858271332 0.29891850592685426 0.49444280473988045 0.012382009387991055 0.003153671659768803 1.8716281710885083e-11 10.72778042658297 -0.06001906019769687 LGS(ph)VQR ddPTM_A549_PD325901_60min_R1 1 LGSVQR 6 0 G3V1X7;Q8N999-2;Q8N999 G3V1X7 C12orf29 Uncharacterized protein C12orf29 1 LGS(1)VQR 67.032 0.05524199999999999 6404400.0 2177.8 2648.9 2727.9 2092.9 3041.3 2491.5 2764.8 3035.4 2850.6 2770.0 3104.4 True False 2398.888652788375 2872.1320993153568 2913.0316981952888 2222.173679679232 2827.6895799154167 2471.2100500541933 2870.0159769566126 2974.856565774765 2730.799195228526 2595.1017272688423 2722.5784804129958 0.8811090920047531 1.0549308752633917 1.0699532517253287 0.8162018820269762 1.0386071880971 0.9076726595147877 1.054153625911732 1.0926614557401115 1.0030194592643233 0.953177932588075 1.0 11.41075792099481 -7.77678753236132 24.998413868872465 1.0133512886643932 0.9675053505914916 0.11618091638839845 0.07919598942401253 494.3436204674789 805163.8442880269 0.011520040085793276 0.01594786957905352 1.6719083533244337e-08 7.77678753236132 -0.045845938072901604 LGS(ph)VSLDLCDGDTGEPR ddPTM_A549_MK2206_60min_R1 2 LGSVSLDLCDGDTGEPR 17 0 Q8N6R0-2;Q8N6R0-3;Q8N6R0-4;Q8N6R0 Q8N6R0-2 METTL13 Methyltransferase-like protein 13 1 LGS(0.959)VS(0.041)LDLCDGDTGEPR;LGS(0.998)VS(0.002)LDLCDGDTGEPR 166.35 4.0028e-23 6325400.0 2602.8 2761.5 2545.6 1614.23 2539.8 1956.8400000000001 2033.63 2313.75 3307.5 3286.7 2805.2 True False 3042.089007649593 2902.0485546798313 2906.6043579003267 2009.7164224655376 2166.1987844527166 2163.911509954736 2403.1142472669053 2641.731148062199 2558.3565309921755 2544.2321872877137 2108.591420418602 1.4427114604524338 1.3762972411714123 1.3784578319697902 0.9531085078903359 1.0273203065687702 1.0262355660752673 1.1396775231067924 1.2528416470260306 1.213301214364367 1.2066027408869127 1.0 11.04206385734641 -6.188030027947516 7.804821780763497 1.0980052960633915 1.3990636613785457 0.6707545673639612 0.09258648625037644 0.1602767292020116 15.395835793160622 0.014990647576407142 0.039874912771323844 6.485895872786895e-07 6.188030027947516 0.3010583653151542 LGS(ph)YSGPTSVSR ddPTM_A549_MK2206_60min_R1 1 LGSYSGPTSVSR 12 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 LGS(0.899)YS(0.101)GPTSVSR 137.6 2.1208999999999998e-08 75108000.0 4788.0 5947.0 5583.4 4486.2 6286.6 5717.0 5502.8 5189.2 8120.4 7530.3 7870.7 True False 5596.097344638952 6249.676898309237 6375.210076956585 5585.319201393172 5361.849467808664 6321.969145362538 6502.5875306030675 5924.784991258501 6281.142365614164 5829.199999979517 5916.187969730742 0.945895798657939 1.0563688865676242 1.0775874785544945 0.9440739932486242 0.9063014047629545 1.0685882831492022 1.0991178042132108 1.0014531352911273 1.061687424022133 0.9852966183298628 1.0 12.530452175282013 LGS(ph)YSGPTSVSR ddPTM_A549_PD325901_60min_R1 2 LGSYSGPTSVSR 12 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 LGS(0.5)YS(0.5)GPTSVSR;LGS(0.763)YS(0.237)GPTSVSR 201.66 1.0397e-24 220537000.0 37560.0 40806.0 42053.0 42220.0 50209.0 48364.0 44443.0 47565.0 52818.0 55477.0 57863.0 True False 41373.06354978944 44244.86482866946 44906.96946523204 44827.833511423 46682.49305164671 47970.139619033085 46134.30268514274 46616.27876097936 50598.24313954267 51974.17275223595 50746.21782377825 0.8152935395788883 0.8718849744096113 0.8849323435527031 0.8833728981949456 0.9199206375095131 0.9452948746961715 0.9091180518191349 0.9186158251804981 0.9970840253602852 1.024197959594189 1.0 15.631012680069636 -6.412233607404269 0.25642101482434015 1.0164532160210225 0.760723011358261 0.8661928486007074 0.021943479107974263 1.38100664022957 0.11356504344545133 0.01626497892302402 0.1078750855789137 3.870493946895667e-07 6.412233607404269 -0.2557302046627614 LGSFGS(ph)ITR ddPTM_A549_PD325901_60min_R1 2 LGSFGSITR 9 0 Q14315-2;Q14315 Q14315-2 FLNC Filamin-C 1 LGS(0.133)FGS(0.867)ITR;LGS(0.191)FGS(0.808)IT(0.001)R 140.45 4.1205e-05 115125000.0 4229.2 4066.7 4098.799999999999 4082.8999999999996 4731.1 4231.9 4024.8999999999996 4141.6 3777.5 4401.700000000001 4679.0 True False 4658.545270627514 4409.415081084892 4376.969216086682 4335.091460061323 4398.803857408945 4197.436809481973 4178.0697720097905 4058.9925389776536 3618.744811610105 4123.775910801179 4103.512662624792 1.1352579250109338 1.074546478495434 1.0666396270572185 1.0564342836189526 1.0719605906114766 1.0228887186611246 1.0181690945087296 0.9891507283375455 0.8818651504526838 1.0049380250147506 1.0 12.002643689836585 -7.843347474750408 1.212987697233284 0.945410336224049 1.0800612106601544 0.6132773528438997 0.038513418192874946 0.21872809638465374 0.6503003379640235 0.008386874431832126 0.01320619047842947 1.4343413716915188e-08 7.843347474750408 0.13465087443610535 LGSLSARS(ph)DSEATISR ddPTM_A549_MK2206_60min_R1 1 LGSLSARSDSEATISR 16 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGS(0.009)LS(0.062)ARS(0.786)DS(0.106)EAT(0.035)IS(0.001)R 44.743 0.01379 74209000.0 2070.9 2238.5 2372.4 2180.7 2662.6 2125.8 2294.7 2357.6 2899.0 3078.6 3275.1 True False 2420.4172913560565 2352.4300885934467 2708.841993511445 2714.9715978953423 2270.9350671248912 2350.750745008165 2711.6172869220864 2691.7970198471894 2242.3811287517215 2383.14212181944 2461.8022818383565 0.9831891493530521 0.9555723081208471 1.1003491277490451 1.1028390126716152 0.9224685036155972 0.9548901479012101 1.1014764698719752 1.0934253492677257 0.9108697092754412 0.9680477345401691 1.0 11.265499181957361 -8.772163799229514 24.9994857125949 0.9579107010227988 1.0260075301005833 0.16888171844993616 0.06628462119660371 291.86960252840146 680368.9781047377 0.012544836675542573 0.013422683115130007 1.689803482346661e-09 8.772163799229514 0.06809682907778447 LGSLSARS(ph)DSEATISR ddPTM_A549_PD325901_60min_R1 3 LGSLSARSDSEATISR 16 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGS(0.001)LS(0.016)ARS(0.911)DS(0.07)EAT(0.001)ISR;LGSLS(0.001)ARS(0.999)DSEATISR;LGSLS(0.007)ARS(0.912)DS(0.08)EATISR 167.28 3.8886000000000004e-22 294935000.0 8607.5 9947.2 10323.4 10567.3 11561.3 11321.0 10517.7 11713.8 11661.3 10354.0 11574.0 True False 9481.327063493407 10785.485453701436 11024.008003647219 11220.018120920427 10749.274172319769 11228.805529465593 10917.956829006285 11480.15906970167 11171.21611426311 9700.246672975301 10150.471373630979 0.9340775136930208 1.062560058217602 1.086058725537173 1.1053691703488697 1.0589926099633529 1.106234884680915 1.0756108191555607 1.1309976302701539 1.1005613141556987 0.9556449465169394 1.0 13.309259105246534 -5.2622398129992 6.129151167004529 1.0665284118369087 0.9308140356324834 0.38923306079067765 0.04828152323930145 0.09992265023519298 19.080759171800114 0.006456031983890958 0.056268708496791935 5.4671398961950975e-06 5.2622398129992 -0.13571437620442528 LGSPDTVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LGSPDTVSPR 10 0 H0Y9Y2 H0Y9Y2 BOD1L1 1 LGSPDT(0.001)VS(0.999)PR;LGSPDT(0.006)VS(0.994)PR 116.55 8.008e-05 15896000.0 3587.5 4066.1000000000004 4033.2 3573.0 4136.1 3657.3 3822.8 3764.9 5226.7 6007.8 6352.8 True False 4192.982294045996 4273.047122282699 4605.16840677388 4448.385160398063 3527.6851690585395 4044.313058480743 4517.353276875301 4298.586104522689 4042.8607953248074 4650.633807401688 4775.224431639557 0.8780702046723173 0.8948369199090319 0.9643878466237262 0.9315552020809889 0.73874751219752 0.846936749545014 0.9459981078468982 0.9001851464909649 0.8466326249584681 0.9739089489883742 1.0 12.221352824889937 -10.881360429906554 1.0328161939061133 1.0027290992820153 0.8814969937811725 0.3182264019079827 0.05830719879873927 0.5192146284102727 0.946208981748765 0.04752427296782548 0.010430563992348535 1.3141337529197366e-11 10.881360429906554 -0.12123210550084274 LGSQHS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 LGSQHSPGR 9 0 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 LGS(0.164)QHS(0.836)PGR;LGS(0.003)QHS(0.997)PGR 66.486 0.0016434999999999998 87430200.0 2478.1 2236.65 1796.25 1647.6 2400.0 1808.08 1796.42 1627.04 2405.1400000000003 2672.8999999999996 3408.1000000000004 True False 2896.3426962718822 2350.4859314954365 2050.9852600088248 2051.2620739635745 2046.963179260776 1999.4098254936316 2122.8062607628785 1857.6779026010236 1860.379630219356 2069.090033590328 2561.7747112250954 1.1306000811003358 0.9175224976638886 0.8006110962926946 0.8007191518346346 0.7990410594231663 0.7804783991085115 0.8286467390989691 0.7251527210652502 0.7262073522966751 0.8076783741068491 1.0 11.322927891766485 -5.315908326621254 2.7606991397756033 0.8369903958295768 1.1674662869238999 0.602989620282572 0.07386016101077487 0.3020985952266551 3.3222063980097465 0.015014713494906403 0.21165683979634506 4.831607796344978e-06 5.315908326621254 0.33047589109432307 LGSQHS(ph)PGR ddPTM_A549_PD325901_60min_R1 4 LGSQHSPGR 9 0 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 LGS(0.009)QHS(0.991)PGR;LGS(0.001)QHS(0.999)PGR;LGS(0.008)QHS(0.992)PGR;LGS(0.003)QHS(0.997)PGR 107.12 0.00015336 295000000.0 13251.2 12781.8 12781.099999999999 11705.2 15045.900000000001 12841.8 13437.8 12636.800000000001 13772.0 14360.4 15124.9 True False 14596.452068982144 13858.967143730999 13648.50230499791 12428.203619562017 13989.127889537156 12737.220638485222 13949.18283244631 12384.749110622175 13193.210733420088 13453.681893238807 13264.633184640676 1.1004037477556186 1.0448059098821152 1.0289392940621775 0.9369428801056351 1.05461852542861 0.9602391910266954 1.0516071298977407 0.9336669124753987 0.994615572837454 1.0142520871830087 1.0 13.695297159901815 -5.516690183577617 1.6815004221648933 0.994876276097399 1.1093861409186674 0.41206396045730365 0.03830409646180783 0.38384839588087427 1.496444948780237 0.004655001530670394 0.060173883139507736 3.0430551021601004e-06 5.516690183577617 0.11450986482126835 LGSQPIRAS(ph)NPDLR ddPTM_A549_MK2206_60min_R1 2 LGSQPIRASNPDLR 14 1 Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5;Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3 Q9UKE5-6 TNIK TRAF2 and NCK-interacting protein kinase 1 LGS(0.001)QPIRAS(0.999)NPDLR;LGS(0.001)QPIRAS(0.999)NPDLR 62.203 0.0017254999999999998 13186400.0 2364.2 2506.1 2788.2 2695.8 2909.4 2702.1 2413.0 2384.8 3113.5 4139.2 4143.6 True False 2763.2191608595244 2633.6497855814328 3183.6086858491885 3356.271121019062 2481.4311140588757 2988.0344284911853 2851.410865622083 2722.8527031436984 2408.2972212378345 3204.151845200751 3114.629762457763 0.8871741977701583 0.8455739482509833 1.0221467489403924 1.0775826910388924 0.796701792286468 0.9593546123868408 0.9154895069685672 0.8742139229399413 0.7732210262247802 1.0287424476006888 1.0 11.604844964247926 -6.778468588117566 24.998937686196445 0.8904676334039121 0.9546538941224266 0.04770890555033236 0.09313261143721144 504.7098104627515 740915.034549938 0.015001004434465308 0.028400128593352114 1.6654492829309446e-07 6.778468588117566 0.06418626071851452 LGSQPIRAS(ph)NPDLR ddPTM_A549_PD325901_60min_R1 2 LGSQPIRASNPDLR 14 1 Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5;Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3 Q9UKE5-6 TNIK TRAF2 and NCK-interacting protein kinase 1 LGS(0.002)QPIRAS(0.998)NPDLR;LGSQPIRAS(1)NPDLR 76.71300000000001 0.00021448 16539500.0 3590.8 3773.4 3203.2 3731.7 3815.6000000000004 3617.0 3215.6 3496.9 3497.5 3734.1 5098.3 True False 3955.335372592753 4091.3976607484515 3420.5884144063753 3962.198633694392 3547.6054191054054 3587.5443512125285 3337.9714176438383 3427.1515862350197 3350.5122378838755 3498.3282887345094 4471.24142078649 0.8846168212265779 0.9150473606117148 0.7650198440424839 0.8861518000961447 0.7934273919124194 0.8023597953208887 0.7465424260309097 0.7664877074859859 0.7493471997077986 0.7824064861429814 1.0 12.126459729707992 -10.862615513501892 1.1120011707662383 0.9999119667124514 0.8076657345292338 0.0 0.08417350694938859 0.2831378924910135 0.6220121613509816 0.04188200576703038 0.01018823005750994 1.3720959628407005e-11 10.862615513501892 -0.19224623218321757 LGSS(ph)GLGSASSIQAAVR ddPTM_A549_MK2206_60min_R1 1 LGSSGLGSASSIQAAVR 17 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LGS(0.283)S(0.717)GLGSASSIQAAVR 213.94 4.1473e-55 3213800.0 2119.2 2220.7 2210.1 1631.9 2296.7 1472.4 1442.5 1740.7 3123.2 2878.2 2605.3 True False 2476.869150534432 2333.724144623395 2523.5254130246344 2031.7155732587744 1958.8584724200919 1628.2083906999828 1704.5835779775625 1987.4495556701747 2415.8001867255502 2228.0126210032845 1958.332107377934 1.2647850388618616 1.1916896709353777 1.2886095282395453 1.0374724315678485 1.00026878231745 0.8314260816976732 0.8704262017436243 1.0148684935423067 1.2336008676077588 1.1377092846557233 1.0 10.935409732462656 -6.266518878370567 24.555772364427757 1.0568784109229232 1.242694240756009 0.4323159176040694 0.11165554028200012 348.8609162922815 1686501.511025184 0.02007729929202083 0.04802174923830708 5.413537152369882e-07 6.266518878370567 0.18581582983308587 LGSS(ph)SNLQFK ddPTM_A549_MK2206_60min_R1 2 LGSSSNLQFK 10 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 LGS(0.076)S(0.859)S(0.065)NLQFK;LGS(0.066)S(0.867)S(0.066)NLQFK 205.97 4.7904000000000005e-20 59779000.0 23650.0 23030.0 24944.0 22492.0 29374.0 22820.0 22284.0 20112.1 32747.0 31412.0 32111.0 True False 27641.54181301401 24202.12863091674 28481.434280116973 28002.541009704248 25053.123511502516 25234.797253309967 26332.71435123189 22963.051765723045 25329.85678621337 24316.00738341854 24136.952481485005 1.1451960157031966 1.0027002642310263 1.1799929714393123 1.1601523030376126 1.0379571957445866 1.0454839844701644 1.090970965428681 0.9513649986814848 1.0494223247795438 1.0074182895322383 1.0 14.5589559132482 -6.867992211684471 6.587946554228989 1.025605379164381 1.1173308648115556 0.42701135941694746 0.05347364634459129 0.1651302026658593 9.135489896750354 0.007544534960998103 0.014369272305011446 1.3552137155319995e-07 6.867992211684471 0.09172548564717453 LGSS(ph)SNLQFK ddPTM_A549_PD325901_60min_R1 1 LGSSSNLQFK 10 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 LGS(0.042)S(0.61)S(0.348)NLQFK 150.06 2.8353000000000002e-08 14321000.0 4758.9 5372.2 6131.4 5859.2 6014.2 5755.2 6194.2 6795.3 6729.7 6515.4 6423.4 True False 5242.020024682984 5824.934147737537 6547.513675103412 6221.1094767913255 5591.783339863643 5708.33155933048 6429.923670596296 6659.762410690279 6446.8741121621515 6104.016532074882 5633.362521287476 0.9305312777003648 1.0340066213963945 1.1622745119564952 1.104333238502379 0.9926191184631359 1.0133080443091864 1.1414006548129572 1.1822002197664752 1.1444095933468794 1.0835476163674693 1.0 12.45978060034302 -7.73736173912498 24.996700616885594 1.0852812843484863 1.0456569192590044 0.15182280936322645 0.07236674921697317 668.2766564221713 693784.6550908509 0.013399562576314231 0.019869072026352696 1.83078885877987e-08 7.73736173912498 -0.03962436508948186 LGST(ph)GSQPNSEAESVPENVPKPPLLPPK ddPTM_A549_MK2206_60min_R1 1 LGSTGSQPNSEAESVPENVPKPPLLPPK 28 1 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 LGS(0.321)T(0.348)GS(0.24)QPNS(0.043)EAES(0.048)VPENVPKPPLLPPK 57.78 0.0011163 2670200.0 1806.8 1683.2 1956.2 1567.8 2405.1 1499.0 1468.0 1354.7 2341.9 2200.9 2069.0 True False 2111.743667981131 1768.8676904715176 2233.6185751589483 1951.911070381217 2051.3129760167044 1657.6231850443307 1734.716597900216 1546.732873594752 1811.4633892458282 1703.7151614085644 1555.210198504949 1.3578509644620305 1.1373817456778264 1.4362165174239245 1.2550786204061828 1.3189940356542593 1.0658515399640724 1.1154225966160907 0.994549080942019 1.1647707756721375 1.0954886760943157 1.0 10.602893869420754 -7.263474807727153 24.67876512605434 1.075069065151208 1.2969579240749507 0.6604438950649958 0.08151993952521285 78.1587369309266 947645.8315276613 0.012782185908077575 0.021060349298641805 5.4516151814776836e-08 7.263474807727153 0.22188885892374266 LGSTAPQVLSTSS(ph)PAQQAENEAK ddPTM_A549_PD325901_60min_R1 2 LGSTAPQVLSTSSPAQQAENEAK 23 0 Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 LGSTAPQVLST(0.003)S(0.049)S(0.948)PAQQAENEAK;LGSTAPQVLS(0.001)T(0.012)S(0.168)S(0.819)PAQQAENEAK 132.76 1.3205e-22 24461000.0 6109.4 6663.5 6601.6 6987.4 8550.3 6936.0 7078.1 7806.3 7486.0 6986.3 8016.0 True False 6729.621790497429 7225.056530555283 7049.624274645708 7418.995828463222 7949.75642493367 6879.515515623468 7347.460968784934 7650.597222576115 7171.389453266249 6545.183825710582 7030.082817610672 0.9572606703351241 1.027734198586707 1.0027796908716473 1.055321255942861 1.13081974013438 0.9785824284160599 1.0451457201015066 1.088265589618806 1.0201002803696135 0.9310251380417033 1.0 12.779325969671483 -5.260344474557318 22.80904978560608 1.0257603969677198 0.9572606166746283 0.13578450267639075 0.05100995787542963 38.05145417452617 792284.1805068161 0.005922610818264694 0.050074710806582774 5.4910516076161175e-06 5.260344474557318 -0.06849978029309156 LGSTGS(ph)QPNSEAESVPENVPKPPLLPPK ddPTM_A549_MK2206_60min_R1 1 LGSTGSQPNSEAESVPENVPKPPLLPPK 28 1 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 LGS(0.283)T(0.3)GS(0.318)QPNS(0.05)EAES(0.05)VPENVPKPPLLPPK 49.453 0.0028948 2711600.0 465.44 479.51 459.75 626.41 672.39 515.68 404.11 335.45 839.57 825.1 583.44 True False 543.9948930845346 503.91501084719386 524.9494632089389 779.880478120613 573.4823217096471 570.2489153193196 477.53155611543326 383.00106477253973 649.4087355177934 638.7093369431628 438.55574587517077 1.2404235908457935 1.1490329692103196 1.1969959763299032 1.7782926924473494 1.3076611744425335 1.300288322939072 1.0888731036062094 0.8733235589200468 1.4807894814417486 1.456392586234552 1.0 8.776616428535906 -7.577714970986066 8.315241348820914 1.1911970865808141 1.3375607940057017 0.0975264388226208 0.2260626400299195 0.6019966178651396 82.3415471476454 0.03847013706536858 0.05714581673070077 2.6441435488051763e-08 7.577714970986066 0.14636370742488758 LGSTLT(ph)PK ddPTM_A549_MK2206_60min_R1 2 LGSTLTPK 8 0 E5RFM9;R4GMT7;O75410-7;H0YAY0;E7EVI4;E7ET87;O75410-3;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 LGST(0.003)LT(0.997)PK;LGS(0.001)T(0.004)LT(0.995)PK 81.33800000000001 0.0039645 5443400.0 2918.7 3921.2999999999997 3377.6 3335.7 4415.9 3369.0 3119.7 3328.0 5253.799999999999 4895.4 5495.5 True False 3411.30520463611 4120.877420773503 3856.594468590563 4152.946649745261 3766.326959707359 3725.5053438387936 3686.5091079491135 3799.7541915725537 4063.822688594617 3789.5257399970405 4130.815681915877 0.8258187891486708 0.9975941165358982 0.9336157227915506 1.005357529731058 0.9117634989611865 0.9018812822243621 0.8924409588372887 0.9198556614877146 0.9837821392964722 0.9173795278707412 1.0 12.012210972859409 -8.821024031480887 4.931576611205192 0.9928777967971834 0.9268912263539528 0.06646367184656954 0.051606631039441436 0.18111876787236783 8.756293052253648 0.007808880730507721 0.008329374504597099 1.5099965969009024e-09 8.821024031480887 -0.06598657044323053 LGSTLT(ph)PK ddPTM_A549_PD325901_60min_R1 2 LGSTLTPK 8 0 E5RFM9;R4GMT7;O75410-7;H0YAY0;E7EVI4;E7ET87;O75410-3;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 LGS(0.001)T(0.004)LT(0.995)PK;LGST(0.001)LT(0.999)PK 72.243 0.0060903 10193600.0 5581.0 5672.5 5125.7 5826.8 6379.0 6490.6 5354.5 6203.9 5612.2 6305.8 6790.4 True False 6147.579011484946 6150.541482640483 5473.560825338028 6186.708202377064 5930.961046355322 6437.742705551573 5558.268427594825 6080.1583476346 5376.3387509512195 5907.650711845444 5955.223847892154 1.0323002406804367 1.032797698245627 0.9191192413825704 1.0388708066056733 0.9959257952082826 1.0810244702775038 0.933343325047667 1.0209789762624402 0.9027937300550289 0.9920115284896388 1.0 12.539940022503677 -7.798548959564837 24.999979762020082 0.9575962032770136 1.0130378142112157 0.16686170454823457 0.048388535345814145 201.06778598606647 135454.71314391028 0.008092947212718285 0.01118218683350797 1.5901974050961086e-08 7.798548959564837 0.05544161093420219 LGSVDS(ph)FER ddPTM_A549_MK2206_60min_R1 2 LGSVDSFER 9 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 LGSVDS(1)FER;LGS(0.005)VDS(0.995)FER 70.1 0.0037093000000000004 3148100.0 969.74 1952.9 1123.6 1021.67 1579.01 941.01 685.64 799.06 1421.07 1246.77 1511.98 True False 1133.4084041332856 2052.2942684896775 1282.943375446577 1271.979195864509 1346.7397207018994 1040.5870536081159 810.2119129320871 912.3292020186193 1099.1999139824788 965.1237910806291 1136.5136374748738 0.9972677553183722 1.8057805914669898 1.1288411622556886 1.1191939576639087 1.1849745364200905 0.9155957476411024 0.7128923808888298 0.8027437348183948 0.9671682571488546 0.8491968413374769 1.0 10.150399280387868 -6.519344932620751 1.2784266236508033 0.9473614227226705 1.379971323402442 0.41656059189143146 0.21174591565944673 0.3393422859241334 1.0582783808766132 0.030235592343458705 0.10415822738567176 3.024510296790696e-07 6.519344932620751 0.43260990067977145 LGSVS(ph)LDLCDGDTGEPR ddPTM_A549_PD325901_60min_R1 1 LGSVSLDLCDGDTGEPR 17 0 Q8N6R0-2;Q8N6R0-3;Q8N6R0-4;Q8N6R0 Q8N6R0-2 METTL13 Methyltransferase-like protein 13 1 LGS(0.382)VS(0.618)LDLCDGDTGEPR 147.07 1.9964e-16 6730800.0 1486.5 1813.0 1556.5 1667.6 1801.0 1501.5 1723.8 1877.8 1491.1 1810.5 1688.6 True False 1637.4083856965372 1965.787872724054 1662.1334499948553 1770.603864605614 1674.5039731127044 1489.2722818207376 1789.4001522995534 1840.3458058943982 1428.4342524399278 1696.1847210181377 1480.9129049173378 1.1056750064501157 1.3274162620885401 1.1223708325288941 1.1956164732756154 1.1307241415430658 1.005644745802162 1.2083088386615382 1.242710357768895 0.9645633093592771 1.14536426510026 1.0 10.532271080360646 -8.772628220982298 24.999728481333406 0.9832659903122138 1.166849376185366 0.2339169220252253 0.0924422936550457 117.97181451831372 263588.8836677313 0.013409887852187791 0.01433935290637094 1.6879974220207318e-09 8.772628220982298 0.18358338587315215 LGT(ph)PLLVR ddPTM_A549_MK2206_60min_R1 1 LGTPLLVR 8 0 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62;A0A087WYL6;Q8TEW8-6;Q8TEW8-3 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 LGT(1)PLLVR 70.256 0.007081699999999999 4690200.0 325.36 367.02 276.7 178.21 502.19 422.76 392.8 376.75 632.8 490.07 589.41 True False 380.2728137117225 385.69975033083205 315.9402207067174 221.87145800015097 428.31851624707025 467.49618259462426 464.16667551444453 430.1554662484852 489.4718103739528 379.362846631603 443.04323011155265 0.8583198836284546 0.8705691095510426 0.7131137533174081 0.5007896361361543 0.9667646115238576 1.0551931523181488 1.047678068340133 0.9709108209151002 1.1047946952054994 0.8562659822972225 1.0 8.79130366694028 -6.980882427297511 24.52476211088186 1.042963952595896 0.7424757462220265 0.5587861068395802 0.11077847690659015 86.88110667048471 111453.67179733922 0.014298973505741525 0.027019548540525972 1.0450030853693598e-07 6.980882427297511 -0.3004882063738695 LGT(ph)PLLVR ddPTM_A549_PD325901_60min_R1 2 LGTPLLVR 8 0 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62;A0A087WYL6;Q8TEW8-6;Q8TEW8-3 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 LGT(1)PLLVR;LGT(1)PLLVR 68.016 0.008198899999999999 10997700.0 828.2 788.54 760.27 967.6899999999999 1316.68 940.6800000000001 1026.94 1249.82 1159.34 968.68 1338.01 True False 912.278254311384 854.9930331813706 811.8664940749048 1027.4620135165546 1224.2009390994085 933.0194139614595 1066.0207636631303 1224.8913596351772 1110.6169715134497 907.5173794840366 1173.4432523442188 0.7774370447730655 0.728618986451478 0.691866856324767 0.8755958257580556 1.0432553399184747 0.7951125136196759 0.9084553185963721 1.043843711392246 0.9464598899816763 0.7733798610806829 1.0 10.19653235955159 -6.45545397676497 4.180597721363431 0.9646184085973505 0.7343909452741599 0.4569224131936249 0.08879717671123068 0.09513401602597756 3.2225462946604324 0.009618017044806906 0.02281465819746324 3.503854175230446e-07 6.45545397676497 -0.23022746332319055 LGT(ph)RLVPAER ddPTM_A549_PD325901_60min_R1 2 LGTRLVPAER 10 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 LGT(1)RLVPAER;LGT(1)RLVPAER 54.523999999999994 0.0075279 7186600.0 658.29 1037.12 1410.5900000000001 1149.0 1267.5900000000001 1269.69 1003.86 1451.53 1403.81 1395.46 1496.98 True False 725.1191161925155 1124.5217421729567 1506.3211199667483 1219.9711204316682 1178.558851348102 1259.3500656043786 1042.0624416332691 1422.578095446744 1344.8127475807755 1307.3504174493064 1312.8609501380768 0.5523198143080218 0.856542912678367 1.1473576998450026 0.9292462543755002 0.8977027241339992 0.9592410113743803 0.7937340519753238 1.0835710326345895 1.0243375335669314 0.9958026532145763 1.0 10.358498407923092 -5.3512968236549945 3.2843212178897727 0.9925009923855261 0.5297179310491759 0.6526861833956151 0.09016022298096862 0.11557310676323836 1.9915639747859486 0.012010973783605064 0.11651376965495734 4.4535176347374955e-06 5.3512968236549945 -0.4627830613363503 LGTLS(ph)PAFSTR ddPTM_A549_MK2206_60min_R1 1 LGTLSPAFSTR 11 0 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 LGT(0.007)LS(0.954)PAFS(0.016)T(0.022)R 47.18899999999999 0.032639999999999995 4308800.0 1285.7 1401.6 1480.3 1016.4 2054.7 1356.1 1401.5 1507.8 2111.1 1828.9 2542.5 True False 1502.6947276529443 1472.9354532823668 1690.22879910428 1265.41804562793 1752.4563518446319 1499.6016018936746 1656.1344086901586 1721.5352674438386 1632.9392207339617 1415.750219773786 1911.12708056976 0.7862871825378296 0.7707155993222826 0.884414655774945 0.6621318166088013 0.9169753124539348 0.7846687000252237 0.8665747168400852 0.9007958104652053 0.854437801303688 0.7407933434503537 1.0 10.900207998305607 -14.999999999995872 0.11908099937753731 1.6081752582586184 0.7307774259445449 0.0 0.1000877736907619 41.01234204337988 0.3406936902584616 5.963981477246006 0.22487873742071635 1.0000000000095057e-15 14.999999999995872 -0.8773978323140735 LGTLS(ph)PAFSTR ddPTM_A549_PD325901_60min_R1 1 LGTLSPAFSTR 11 0 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 LGT(0.1)LS(0.9)PAFSTR 66.498 0.0051186999999999995 7395300.0 567.62 852.32 1206.6 796.41 695.14 633.12 931.14 1063.4 946.26 1039.5 1126.6 True False 625.2443645402417 924.1479976172997 1288.4871318752291 845.6024369216581 646.315764502812 627.9640806302671 966.5750422393593 1042.189652778838 906.4919829077896 973.8657925978204 988.0353421058118 0.6328157889652517 0.9353390088735609 1.3040901240729514 0.8558422972192627 0.6541423539823094 0.6355684395781628 0.9782798256783873 1.0548100947053236 0.9174691878691021 0.9856588637023939 1.0 9.948418837828461 LGVIEDHSNR ddPTM_A549_MK2206_60min_R1 2 LGVIEDHSNR 10 0 P14625;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 ; 154.85 1.8132999999999998e-08 15909700.0 701.2 1148.0 898.0899999999999 820.73 1091.1 775.5999999999999 847.65 1019.5999999999999 1186.0700000000002 1381.17 1596.15 False True 819.5454173059375 1206.4282964955448 1025.4526664781208 1021.8088868439701 930.6006353714297 857.673477198387 1001.657032840679 1164.1314223940428 917.4270387645923 1069.1627377357747 1199.7819035010516 0.6830786619755173 1.005539667647177 0.8546992278228024 0.8516621928220928 0.7756415000558591 0.7148578209886588 0.8348659284806432 0.9702858652868676 0.7646615073018462 0.8911309085558629 1.0 10.228556461050884 -10.945933526138806 1.0928778704715967 1.0043095997328215 0.8282317258556405 0.14722375087889772 0.09727000916580711 0.5157810799259506 1.049000646382833 0.07219548791128301 0.015222242527131878 1.1325737036505417e-11 10.945933526138806 -0.176077873877181 LGVIEDHSNR ddPTM_A549_PD325901_60min_R1 2 LGVIEDHSNR 10 0 P14625;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 ; 192.26 1.0992e-14 33446000.0 2343.7 2809.0 2292.3999999999996 2710.3 3099.7 2656.9 2890.6000000000004 2734.8 2891.8999999999996 3099.7 3060.6 False True 2581.6306986592504 3045.724288186356 2447.9760493210447 2877.7090754620995 2881.987765384479 2635.2630872923874 3000.603364797014 2680.252268590904 2770.363499853146 2903.9844130018882 2684.16560274192 0.9618000826856851 1.1347005881735082 0.9120063407490195 1.0721056377901839 1.0736996862043389 0.9817811108973389 1.1178905510643038 0.9985420667983308 1.0321134795197338 1.0818946528617384 1.0 11.390257967707011 -10.430817991528775 0.7008279202031896 0.9991708996217534 1.034138934942411 0.0 0.06789302007186289 2.2567107005159404 1.9383892630715238 0.04356189022024348 0.011637874555032481 3.708361029206061e-11 10.430817991528775 0.03496803532065762 LGVKS(ph)GDYSTMEGPELR ddPTM_A549_MK2206_60min_R1 1 LGVKSGDYSTMEGPELR 17 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 LGVKS(0.955)GDY(0.002)S(0.022)T(0.022)MEGPELR 40.723 0.022409000000000002 5328900.0 2766.0 2938.5 2900.3 2279.9 3244.7 2737.2 2661.2 2461.6 3828.6 3730.4 3496.8 True False 3232.8331777926765 3088.057098651708 3311.606151484253 2838.475602348599 2767.4089282281 3026.84868719369 3144.7055928692457 2810.5393383338337 2961.428213017882 2887.700049124681 2628.448053229633 1.229939915997359 1.1748594745318794 1.2599093017703769 1.0799055354588045 1.0528680316994368 1.1515725728246875 1.1964115436884042 1.0692771100727902 1.126683180738196 1.0986331061694368 1.0 11.359995507459052 -14.999999999889376 0.06665885672522233 0.4711628314245232 1.3523725402842324 0.3632578618610771 0.0607634889869828 126.28774522723289 0.6321767829364024 10.58809668904223 1.5633351961875528 1.000000000254722e-15 14.999999999889376 0.8812097088597092 LGVKS(ph)GDYSTMEGPELR ddPTM_A549_PD325901_60min_R1 2 LGVKSGDYSTMEGPELR 17 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 LGVKS(0.977)GDY(0.002)S(0.01)T(0.01)MEGPELR;LGVKS(0.89)GDY(0.004)S(0.084)T(0.023)MEGPELR 60.621 0.00081693 16373000.0 5814.9 6394.7 5218.3 6667.5 7693.7 6291.3 6439.7 6527.700000000001 6407.700000000001 6107.299999999999 7930.7 True False 6405.224367296869 6933.6038112015995 5572.445218187061 7079.336332008834 7153.3210538241 6240.065738673867 6684.766307439053 6397.499902618415 6138.406652376987 5721.684035721663 6955.27417684942 0.9209161572115464 0.9968843261822877 0.8011826818754184 1.017837133663595 1.0284743450709504 0.8971703458425666 0.9611075189083487 0.9198055662438798 0.8825542309760598 0.8226396099187934 1.0 12.763891671576909 -7.685276955781489 0.004282802139543947 1.8757164888783926 1.0413137005046925e-07 0.0 0.07618514570186097 34356.21524484793 66.05169193794136 14330.6056509257 14595.666833665086 2.064063453330093e-08 7.685276955781489 -1.8757163847470226 LGVQDLFNSSK ddPTM_A549_PD325901_60min_R1 1 LGVQDLFNSSK 11 0 P30740-2;P30740 P30740-2 SERPINB1 Leukocyte elastase inhibitor 0 63.623999999999995 0.0065095 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LGVS(ph)VS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 LGVS(0.997)VS(0.606)PS(0.397)R 50.292 0.032757 4505000.0 571.72 605.12 579.97 367.65 578.54 434.04 633.78 397.32 685.08 626.63 867.11 True False 668.2123587880074 635.9180233235053 662.2184669435312 457.72426650443566 493.4375323873037 479.9698247075658 748.9296222188001 453.6413267414683 529.9104738479572 485.07384778656416 651.7826559814538 1.0252073335425191 0.9756596274657546 1.016011182357044 0.702265183499237 0.7570583964746436 0.7363955151350685 1.1490480996169843 0.6960009177574318 0.8130171445725545 0.7442263818084272 1.0 9.34824715206528 LGVS(ph)VS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 LGVS(0.992)VS(0.856)PS(0.152)R 47.843999999999994 0.03866 16450000.0 896.99 1065.4 872.45 1153.5 1046.0 958.02 1094.1 1049.0 984.64 880.69 1215.5 True False 988.0517644708623 1155.1849970216256 931.6597034680449 1224.7490752114268 972.5325685041024 950.2182027505185 1135.736574214492 1028.07687207542 943.2590049778349 825.0830831005039 1066.0012056893424 0.9268767794985061 1.0836619985571323 0.8739762192535008 1.1489190337448334 0.9123184507799901 0.8913856735612682 1.0654177201235475 0.9644237422889234 0.8848573528281004 0.7739982644456336 1.0 10.057993354505003 LGVS(ph)VSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 LGVS(0.999)VS(0.18)PS(0.821)R 58.37 0.013284 13319000.0 1163.9 1190.2 1232.4 1444.4 1438.9 1262.4 1010.9 1213.7 1069.5 1465.2 1578.1 True False 1282.0582711821066 1290.5023310072636 1316.0380750232323 1533.6173075295933 1337.836627935518 1252.1194329473863 1049.370352685706 1189.491801370769 1024.552634286435 1372.6870219474044 1384.0037044001244 0.9263402020573316 0.9324413850226018 0.9508920177302915 1.10810202505514 0.9666423750761441 0.9047081514063566 0.7582135433232382 0.8594570936400321 0.7402817138632674 0.9918232282061521 1.0 10.434632089134222 -7.350539023202567 3.8909621776241226 0.8635848971027973 0.9804902062125681 0.2507131250687469 0.08758074854261697 0.29609810938344894 8.32293937822086 0.016318904116218218 0.02679537806773186 4.461295361475081e-08 7.350539023202567 0.11690530910977082 LGVSVS(ph)PS(ph)R ddPTM_A549_MK2206_60min_R1 1 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 LGVS(0.368)VS(0.857)PS(0.774)R 47.187 0.040244 5578900.0 638.94 522.38 567.67 706.45 925.99 628.46 470.41 561.53 858.61 696.94 947.06 True False 746.7774514167938 548.966910734619 648.1741419898168 879.530281713746 789.7780976515355 694.9632200620149 555.8774079143325 641.1285971135023 664.136205918425 539.5007699541485 711.8788644737058 1.0490232098250152 0.7711521413695459 0.9105118501713264 1.2355055411906146 1.1094276527445732 0.976238029732493 0.7808595473968656 0.9006147381373524 0.9329342941083424 0.7578547374812189 1.0 9.475487958366386 -7.5204755401921295 24.986477452342086 0.9455424511953543 1.0114848250027428 0.11294037299680315 0.1337000632084734 249.5046064117842 2594144.3492875523 0.019880707525815108 0.02976498288983182 3.016646768303925e-08 7.5204755401921295 0.06594237380738854 LGVSVS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGVSVS(0.999)PS(0.001)R;LGVSVS(1)PSR 188.91 2.4862e-11 1074020000.0 7492.0 7212.6 7234.6 6554.5 8841.5 6573.8 5936.9 6849.7 9248.599999999999 9540.2 8977.9 True False 8756.466438186084 7579.690532494568 8260.575065864901 8160.352794242684 7540.927062264229 7269.435152664721 7015.557881521657 7820.665951326476 7153.806866979355 7385.062194043343 6748.43965256529 1.2975542331266874 1.1231767523642735 1.2240718582590868 1.2092206812786244 1.117432688221149 1.077202364831311 1.0395822208849161 1.158885068840113 1.0600682876759477 1.0943362576023115 1.0 12.72033825116157 -2.0000000001686864 0.13495642537425181 0.9624224791723931 1.958104433365062 0.561574675238611 0.05582490249990818 26.820464167716175 0.23299732494842712 0.11698000523204251 5.154221969182152 0.009999999996115852 2.0000000001686864 0.9956819541926688 LGVSVS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGVS(0.002)VS(0.962)PS(0.036)R;LGVSVS(1)PSR;LGVS(0.007)VS(0.987)PS(0.007)R 164.85 3.2589e-06 1696092800.0 17450.0 16964.8 17754.4 17982.9 18916.2 18435.7 17391.8 17388.6 18829.3 19697.1 19925.4 True False 19221.51115398895 18394.483233970786 18959.320349880298 19093.662890870877 17587.59136934732 18285.56577153685 18053.654466158132 17041.770731907196 18037.970001654565 18453.421744471878 17474.702117517427 1.0999621638597459 1.0526350097568375 1.0849581424838495 1.0926459725874544 1.0064601531442832 1.0464021445725578 1.0331308851359668 0.9752252494664134 1.0322333325254507 1.0560078003260118 1.0 14.09298024246099 -6.762928888196945 24.998502107316757 1.0157425663590962 1.0805855068917989 0.5910773486557195 0.024182084366102575 17.744238009263128 297811.2688103894 0.003115776070996542 0.0061225778871155595 1.72612050551098e-07 6.762928888196945 0.06484294053270268 LGVSVSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGVS(0.009)VS(0.477)PS(0.514)R 59.067 0.010074 5828500.0 1510.8 1795.4 1356.7 1967.2 2239.0 1706.8 1423.7 2001.6 1605.2 1956.9 2092.2 True False 1664.1753038078239 1946.7046589568479 1448.7738204998536 2088.7094761646454 2081.7403641306746 1692.9003866877367 1477.879682578534 1961.676517775176 1537.7390262333656 1833.3410000333563 1834.8726635485343 0.9069704600587422 1.0609480960886066 0.7895773092493577 1.1383402879441267 1.1345421431614295 0.9226255425342532 0.8054399152257262 1.0691077134374058 0.8380630747746114 0.9991652480602028 1.0 10.841464231086773 LGVTANDVK ddPTM_A549_PD325901_60min_R1 1 LGVTANDVK 9 0 A0A5K1VW95;P40925;P40925-3;B8ZZ51;B9A041;P40925-2;C9JF79 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic;Malate dehydrogenase 0 54.538999999999994 0.054155999999999996 4131100.0 2222.5 2358.9 2190.2 3036.6 3339.0 3283.0 2800.9 2768.2 3255.5 2951.6 3051.1 False True 2448.1265638819755 2557.69278156027 2338.840142742522 3224.163885381029 3104.480158924664 3256.2643364751825 2907.4897822112916 2712.986079389109 3118.6826563062054 2765.2354722767927 2675.834042516458 0.9149022416874787 0.9558488086035846 0.8740602390060731 1.20491922673534 1.160191592452083 1.2169156549831714 1.0865732836992297 1.013884282912296 1.165499282374506 1.0334106780689054 1.0 11.385772926253175 -6.2489616319759556 24.96437293457263 1.0982857867450952 0.9190282581575783 0.584340124518643 0.07281252775673741 514.8579220448838 1030080.1772883486 0.011872961922112119 0.03116592579403426 5.636874529551534e-07 6.2489616319759556 -0.17925752858751698 LGYLVS(ph)PPQQIR ddPTM_A549_MK2206_60min_R1 3 LGYLVSPPQQIR 12 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LGYLVS(1)PPQQIR;LGYLVS(1)PPQQIR;LGYLVS(1)PPQQIR 84.169 3.038e-05 4470900.0 1292.9 1768.94 1372.69 1632.67 1853.8600000000001 1781.96 1348.24 1560.8200000000002 2181.2799999999997 2299.9 2303.0 True False 1511.1099116298437 1858.9714902463663 1567.358082984837 2032.674223293342 1581.1596497934918 1970.5258244306851 1593.1977560987652 1782.0710148107796 1687.223562788393 1780.3509926500788 1731.1015404334937 0.872918125444819 1.073866233046533 0.9054108302580258 1.174208546301871 0.9133835380895945 1.1383074755610443 0.9203375532204799 1.0294433764783795 0.9746531462076379 1.0284497766689367 1.0 10.75747463535359 -5.237371936065606 23.049023734760258 1.0014018819203274 0.8729176866898548 0.17153197333706904 0.08508000635734864 2858.4122498198058 2737333.597392315 0.009730817532758926 0.7182732185428272 5.789326777532827e-06 5.237371936065606 -0.1284841952304726 LGYLVS(ph)PPQQIR ddPTM_A549_PD325901_60min_R1 2 LGYLVSPPQQIR 12 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LGYLVS(1)PPQQIR;LGYLVS(1)PPQQIR 149.41 4.1195e-12 23711000.0 8703.3 9742.2 9117.8 8965.400000000001 10884.599999999999 9872.7 10594.099999999999 10233.6 11299.9 11168.5 11095.6 True False 9586.852608969173 10563.20938425388 9736.588737785478 9519.172396099291 10120.103245831497 9792.300004483259 10997.264272813956 10029.482819896102 10825.004499460765 10463.319003971861 9730.911540803521 0.9851957413002592 1.0855313338283241 1.000583418825477 0.9782405642250093 1.0399954005743473 1.0063086036104967 1.1301371127155337 1.030682765724528 1.112434786203688 1.075266069380779 1.0 13.248359240110426 LGYSEPTVYEFS(ph)MPPK ddPTM_A549_PD325901_60min_R1 1 LGYSEPTVYEFSMPPK 16 0 H9KV31;O15394 H9KV31 NCAM2 Neural cell adhesion molecule 2 1 LGY(0.013)S(0.041)EPT(0.041)VY(0.013)EFS(0.892)MPPK 41.644 0.024434 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LHDAFFK ddPTM_A549_PD325901_60min_R1 1 LHDAFFK 7 0 E9PPJ0;Q13435 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 0 68.422 0.024487000000000002 1093400.0 264.15 257.92 390.77 369.94 255.53 389.83 261.34 218.95 376.22 321.1 289.29 False True 290.9663135430478 279.65582357031866 417.29000209090265 392.79035360530133 237.58245433064351 386.65535372772473 271.28543671073527 214.5828704870478 360.40878174029217 300.82569120073106 253.7091639604033 1.1468498378263519 1.1022693039734461 1.6447573102090614 1.5481914309827793 0.9364362351835399 1.5240102000733033 1.069277248310491 0.84578289225902 1.4205587851629262 1.1857107820026607 1.0 7.987031820179567 -7.795560263197528 24.99968286689991 1.1627505049937235 1.315418507043189 0.1452185817548579 0.23861709070175066 402.99936099937275 295268.1752254294 0.040902224963889414 0.056516142625165904 1.6011784515808332e-08 7.795560263197528 0.1526680020494655 LHDFGYR ddPTM_A549_MK2206_60min_R1 2 LHDFGYR 7 0 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 ; 113.08 0.0082168 4419900.0 109.16 91.17399999999999 108.56 111.78 365.85 177.005 235.93 98.65799999999999 296.49 121.62 445.61 False True 127.58353929423299 95.8143671643596 123.95544040448594 139.16610501799488 312.03394963856437 195.7355516135902 278.79542707261453 112.64307362745338 229.33548839723952 94.14595753124163 334.9527387896523 0.3809001226717972 0.28605339222059706 0.3700684486187438 0.41547982417122464 0.9315760508963005 0.584367670259626 0.8323425808668962 0.3362954249440914 0.6846801409235839 0.28107236224261645 1.0 8.387813738109754 -9.737652422923302 0.10392436825977054 1.5516630612492242 2.875937951826368e-16 0.0 0.2753660238447302 9.180792615493772 0.4032790184653552 3.6347045803880684 2.1978695928715117 1.8295638775272823e-10 9.737652422923302 -1.551663061249224 LHDFGYR ddPTM_A549_PD325901_60min_R1 2 LHDFGYR 7 0 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 ; 99.384 0.012248 10652500.0 226.74 237.94 242.621 296.82 385.61 107.88 263.627 281.98 392.81 300.0 316.05 False True 249.75847788283423 257.9920388505026 259.0867200585944 315.1538972728701 358.52608388228197 107.00146104749999 273.65946974722976 276.35568769096943 376.301561733571 281.0579488016798 277.1778536060196 0.9010765998564977 0.9307815739752869 0.9347309559112903 1.1370096606665756 1.2934874818386128 0.38603899862646235 0.9873064034048302 0.9970337965160132 1.357617705880809 1.0139985758067647 1.0 8.114668181127374 -8.544682632647461 22.750228489869407 1.1693199284018028 0.9420601020866801 0.10465439284434175 0.22619858766922324 114.65158753722817 119626.6075879805 0.04016199450389915 0.045542709184039576 2.8531024542561e-09 8.544682632647461 -0.22725982631512265 LHDNPLTDENKEHEADT(ph)ANMSDKELK ddPTM_A549_MK2206_60min_R1 1 LHDNPLTDENKEHEADTANMSDKELK 26 2 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 1 LHDNPLT(0.119)DENKEHEADT(0.745)ANMS(0.136)DKELK 57.61 0.00036116 4478500.0 658.86 733.43 738.39 345.57 1161.6 658.29 668.15 722.84 1230.7 1070.7 1441.2 True False 770.0594604195524 770.7584542671839 843.1048050872182 430.23466551322656 990.7301787622157 727.9498108624638 789.544206326314 825.3047836046585 951.9484150240573 828.8281263665544 1083.3102649034959 0.7108392538753903 0.7114844927051855 0.7782671616818144 0.3971481480899223 0.9145396391591217 0.6719679804080056 0.7288255561730957 0.7618360227373815 0.8787403257079442 0.7650884083890672 1.0 10.081230781100173 -8.939584538360132 0.6451690024448278 0.9829060481508981 0.6843354196176584 0.19708965852642968 0.13261563016356515 0.35389759490197387 0.32294762726599024 0.034651396938026435 0.030730037489707353 1.149252511865736e-09 8.939584538360132 -0.2985706285332397 LHDNPLTDENKEHEADTANMS(ph)DKELK ddPTM_A549_MK2206_60min_R1 2 LHDNPLTDENKEHEADTANMSDKELK 26 2 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 1 LHDNPLTDENKEHEADT(0.026)ANMS(0.974)DKELK;LHDNPLTDENKEHEADT(0.002)ANMS(0.998)DKELK 127.67 2.9551999999999997e-24 15862000.0 2362.7 3181.6000000000004 2753.5 1737.08 4009.9 2553.6 2392.38 2260.06 4577.9 3824.3999999999996 3865.5 True False 2761.4659975310033 3343.5298502876535 3143.9877040691986 2162.6646779804855 3420.049021882409 2823.8202570575068 2827.0444785316886 2580.4304261434677 3541.0129594041064 2960.4653838388463 2905.589667627302 0.9503977895770844 1.1507233411309494 1.0820480741303613 0.7443118008285433 1.1770585020957944 0.9718578946363862 0.9729675563033808 0.8880918234578669 1.218689961234509 1.0188862580366882 1.0 11.504615262141522 -8.759321586382985 24.999079260137783 1.1032702538315282 0.9970445950510554 0.07757108017523417 0.12558571501484025 90.64356385171301 1069980.698413933 0.02245953839478512 0.024860026979242267 1.7405175776256346e-09 8.759321586382985 -0.10622565878047285 LHDNPLTDENKEHEADTANMS(ph)DKELK ddPTM_A549_PD325901_60min_R1 4 LHDNPLTDENKEHEADTANMSDKELK 26 2 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 1 LHDNPLTDENKEHEADT(0.044)ANMS(0.956)DKELK;LHDNPLTDENKEHEADTANMS(1)DKELK;LHDNPLTDENKEHEADTANMS(1)DKELK;LHDNPLTDENKEHEADT(0.006)ANMS(0.994)DKELK 277.9 1.2764999999999996e-153 58897400.0 10276.89 9857.75 10684.0 10688.0 12779.499999999998 10379.55 10429.7 10650.5 11792.800000000001 11885.899999999998 12891.9 True False 11320.192307353438 10688.49718827663 11409.080488111182 11348.173485790834 11881.912006881623 10295.022386128829 10826.607940850827 10438.067422344378 11297.189626566687 11135.422245539612 11306.27802848741 1.0012306683800778 0.9453594862381578 1.009092511201719 1.003705503897734 1.0509127740308384 0.9105580421947337 0.9575748901249376 0.9232098658855302 0.9991961632379972 0.9848884148685086 1.0 13.46483645887001 -8.932355155629514 24.999884290791513 0.9996474994769876 0.9751419014782678 0.043341201909630755 0.03893109504686933 108.42661245799964 40070.85182098969 0.006756499207044955 0.007192811729359905 1.1685433933670753e-09 8.932355155629514 -0.024505597998719764 LHFFMPGFAPLTSR ddPTM_A549_PD325901_60min_R1 1 LHFFMPGFAPLTSR 14 0 Q5JP53;P07437;Q5ST81;K7ESM5;A0A075B736;Q5SQY0;A6NNZ2;Q9BUF5;P68371;P04350;Q3ZCM7;Q9BVA1;Q13885 Q5JP53;P68371;Q9BVA1 TUBB;TUBB6;TUBB8;TUBB4B;TUBB4A;TUBB2B;TUBB2A Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 64.313 0.00084805 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LHGS(ph)VPNLSR ddPTM_A549_MK2206_60min_R1 1 LHGSVPNLSR 10 0 J3QLK7;Q9BZF2-2;Q9BZF2 J3QLK7 OSBPL7 Oxysterol-binding protein-related protein 7 1 LHGS(1)VPNLSR 58.04 0.0036853000000000003 3447500.0 263.28 235.09 172.6 288.61 306.0 283.39 366.29 261.67 401.32 432.6 559.97 True False 307.71522742200125 247.0550768494231 197.07727536674906 359.3194629561952 260.9878053557488 313.3781417009426 432.8401516654425 298.7625238307663 310.4216607763507 334.8753595462517 420.9139946142177 0.7310643774247348 0.586949068005823 0.46821269401455096 0.8536648045772961 0.6200501971785309 0.7445182286898409 1.028333952312884 0.7097947030832096 0.7374942737669317 0.7955909374150807 1.0 8.71738166720111 -14.999999993916878 0.0838390671306185 1.9365452701361232 0.44061088067827325 0.25022791454403914 0.1375983516667169 99.5260560785216 0.6139405697035398 17.238442637582892 1.601221528577941 1.000000014006905e-15 14.999999993916878 -1.49593438945785 LHGS(ph)VPNLSR ddPTM_A549_PD325901_60min_R1 2 LHGSVPNLSR 10 0 J3QLK7;Q9BZF2-2;Q9BZF2 J3QLK7 OSBPL7 Oxysterol-binding protein-related protein 7 1 LHGS(1)VPNLSR;LHGS(1)VPNLSR 95.094 0.00017353 10122100.0 632.49 637.71 892.0 746.3800000000001 804.13 651.93 767.12 643.89 641.1800000000001 629.01 1196.97 True False 696.6999191854713 691.45205974344 952.5364840317454 792.4821974480321 747.6506828979004 646.6208982267023 796.3131713841707 631.0471088280667 614.2334343635118 589.2942012524816 1049.7502782179947 0.6636815761250908 0.6586824258024638 0.9073934094580335 0.7549244938456331 0.7122176563430648 0.6159759246021583 0.7585739083927212 0.6011402158419065 0.5851233832547345 0.561366082467574 1.0 10.035830455196216 -10.896113141564467 1.1464619170075758 1.0000430571688772 0.6907595003056842 0.0 0.15437860328124256 0.27109802487940016 0.6326874685525207 0.0662580951236927 0.015834277937506934 1.2702431407954657e-11 10.896113141564467 -0.309283556863193 LHIIEVGT(ph)PPTGNQPFPK ddPTM_A549_MK2206_60min_R1 1 LHIIEVGTPPTGNQPFPK 18 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 LHIIEVGT(0.954)PPT(0.046)GNQPFPK 56.93600000000001 0.006994800000000001 888620.0 1149.3 1137.5 1524.5 1351.3 1843.4 1438.7 1010.3 1313.1 2417.0 2130.0 1768.5 True False 1343.27374231277 1195.3938913446718 1740.6970237346977 1682.3685606621627 1572.2383019372132 1590.942279068231 1193.858432464977 1499.2359462000964 1869.5533591558833 1648.8315206507539 1329.3326418830368 1.0104872926387976 0.8992436156922793 1.3094518022734714 1.2655737982022623 1.1827275223679858 1.1967977231151241 0.8980885557536926 1.1278109774513525 1.4063849034110896 1.2403453196749445 1.0 10.376486443261664 -5.750085018004038 24.990608127071607 1.1821213017798855 0.954865385195893 0.2945055169044398 0.13485931528676584 256.61847980618023 564798.3240776724 0.02322894844411387 0.08838212814007815 1.7779313260194958e-06 5.750085018004038 -0.22725591658399247 LHIIEVGT(ph)PPTGNQPFPK ddPTM_A549_PD325901_60min_R1 1 LHIIEVGTPPTGNQPFPK 18 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 LHIIEVGT(1)PPTGNQPFPK 96.48700000000001 1.9865e-06 1660500.0 1841.6 1947.3 1786.7 2068.4 2614.3 2316.5 1753.0 2216.4 2171.9 2094.3 2610.3 True False 2028.5578762857347 2111.405805049945 1907.9562062999091 2196.1603703227715 2430.680586845385 2297.6351920331276 1819.7113742784081 2172.1921632678354 2080.6225959857006 1962.065540584527 2289.2496480550317 0.8861234850507531 0.9223134780620433 0.8334417383970887 0.9593363363356419 1.0617804785557199 1.0036630098360921 0.7948942466036644 0.9488664397582635 0.9088666226304403 0.8570780134230955 1.0 11.160659085420157 LHKPPADS(ph)GVDLR ddPTM_A549_MK2206_60min_R1 4 LHKPPADSGVDLR 13 1 O15427 O15427 SLC16A3 Monocarboxylate transporter 4 1 LHKPPADS(1)GVDLR;LHKPPADS(1)GVDLR;LHKPPADS(1)GVDLR;LHKPPADS(1)GVDLR 89.866 7.8679e-05 28509900.0 7385.4 8029.6 6340.9 5545.51 7516.1 6288.900000000001 6123.19 6293.5 8425.5 9673.5 10721.099999999999 True False 8631.874964305869 8438.272342805427 7240.134967398721 6904.160198947403 6410.491646517466 6954.387223766039 7235.694363144836 7185.622898035411 6517.137702758754 7488.2496314624705 8058.754982692808 1.0711176829229712 1.047093795620748 0.8984185501293714 0.8567278957822836 0.7954692331861193 0.8629604993204859 0.8978675215569156 0.8916542212125126 0.8087027979824587 0.9292067630228776 1.0 12.976341255048585 -5.747057763750724 4.735386610478067 0.8908424519908088 1.0643510829710805 0.6186477946982325 0.05333398749983131 0.12867384019161915 7.231790033718715 0.010398592038012874 0.03994172407429525 1.790367708637946e-06 5.747057763750724 0.1735086309802717 LHKPPADS(ph)GVDLR ddPTM_A549_PD325901_60min_R1 4 LHKPPADSGVDLR 13 1 O15427 O15427 SLC16A3 Monocarboxylate transporter 4 1 LHKPPADS(1)GVDLR;LHKPPADS(1)GVDLR;LHKPPADS(1)GVDLR;LHKPPADS(1)GVDLR 89.866 7.8679e-05 47087800.0 9346.8 10162.000000000002 8970.6 9901.099999999999 9853.800000000001 8448.4 8340.7 9113.7 9504.4 11493.6 12674.699999999999 True False 10295.680255249516 11018.387403542105 9579.398860599975 10512.668459970404 9161.70308176455 8379.599031458087 8658.109902706166 8931.920103940663 9104.96312044132 10767.89213448995 11115.792251543162 0.9262210036194413 0.9912372554473088 0.8617828260752268 0.9457417179158751 0.8242060371803608 0.753846315389241 0.7789017378859519 0.8035342782428018 0.819101591177841 0.9687021753213394 1.0 13.440323156222044 -5.768107992769419 24.969617480899004 0.8792349556275156 0.9587291337780066 0.15752270483292974 0.07838931519989968 259.2120868346415 970597.5331206638 0.013431189639462993 0.043173476555654046 1.7056582029628666e-06 5.768107992769419 0.07949417815049098 LHKRS(ph)PPPETIK ddPTM_A549_MK2206_60min_R1 2 LHKRSPPPETIK 12 2 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 LHKRS(1)PPPETIK;LHKRS(1)PPPETIK 86.641 6.0478e-05 11851600.0 3936.8 4367.6 4403.6 3081.8 4749.2 3662.8 3223.8 3282.9 4640.2 5629.799999999999 6470.9 True False 4601.235594480911 4589.892184472079 5028.096696436942 3836.8411383472603 4050.5989712271985 4050.3950648301384 3809.5227304568875 3748.2611284595964 3589.202108876763 4358.024269934091 4863.996942245378 0.94597830737057 0.9436461903599053 1.0337376351465817 0.788824743087945 0.8327716935934815 0.8327297720216792 0.7832082905665415 0.7706133809223322 0.737912081667525 0.8959759476991542 1.0 12.24792660649276 -6.262149476544511 24.99981545880168 0.8486818615716963 0.9713732589579808 0.4270742629418042 0.0720976769249856 76.40531763892339 2690007.2496320438 0.014693064811193323 0.03617981888364366 5.468277219889511e-07 6.262149476544511 0.12269139738628443 LHKRS(ph)PPPETIK ddPTM_A549_PD325901_60min_R1 2 LHKRSPPPETIK 12 2 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 LHKRS(1)PPPETIK;LHKRS(1)PPPETIK 90.70700000000001 5.5815e-05 17441500.0 3562.0 3796.9 3908.4 3620.9 4728.2 4684.8 3737.1 4730.5 4452.7 4169.2 4868.7 True False 3923.611617794191 4116.878088221709 4173.647527118467 3844.5547693394487 4396.10754340449 4646.648542040492 3879.317385519588 4636.1464664945415 4265.568503681351 3905.9560004798786 4269.880765232169 0.9189042583442841 0.9641669907374706 0.9774623125551213 0.9003892569188419 1.0295621318515804 1.088238477260579 0.9085306121677276 1.0857789061101468 0.9989900744803154 0.9147693378898127 1.0 12.059980068369676 -6.774312384018417 24.983553386898308 1.0077057649650398 0.944599833669691 0.21969104393509264 0.057004409300180144 214.2119008710516 415736.4167173348 0.006620527381712484 0.01256838758570048 1.6814641643116592e-07 6.774312384018417 -0.0631059312953488 LHLS(ph)PPLGR ddPTM_A549_MK2206_60min_R1 2 LHLSPPLGR 9 0 Q6P0Q8;A0A669KBJ4 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LHLS(1)PPLGR;LHLS(1)PPLGR 98.25399999999999 0.00025813 39302000.0 1126.52 1126.41 902.22 674.39 1492.7800000000002 1322.76 1263.85 1183.47 1549.3600000000001 1831.4 1749.79 True False 1316.6490352302988 1183.739457713891 1030.1683625804649 839.6155802745172 1273.1940394737087 1462.7335852229742 1493.4751854606184 1351.23049672487 1198.4324338195115 1417.6854680374606 1315.2688512527673 1.0010493550244248 0.8999980928510569 0.7832378616731097 0.6383604230228673 0.9680104856592756 1.1121175597139321 1.135490423906955 1.0273416689202743 0.9111691747873666 1.0778674388032101 1.0 10.361142012487294 -6.967417775304754 24.999304729070552 0.989377131962907 0.8285964103839151 0.4223419772323179 0.10660070964070568 182.6396606113287 140132.86291845902 0.01641612821162889 0.031023416967773887 1.0779093142543495e-07 6.967417775304754 -0.16078072157899193 LHLS(ph)PPLGR ddPTM_A549_PD325901_60min_R1 3 LHLSPPLGR 9 0 Q6P0Q8;A0A669KBJ4 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LHLS(1)PPLGR;LHLS(1)PPLGR;LHLS(1)PPLGR 100.79 0.00023379 62406000.0 3215.5200000000004 2477.42 2177.7200000000003 2700.31 3271.02 1986.613 2442.37 2718.19 2978.978 2543.165 3237.89 True False 3541.9572232592886 2686.200877906247 2325.513174894184 2867.1020158510323 3041.274839606395 1970.4346823874405 2535.3157268661453 2663.973568071196 2853.781914335048 2382.5891278807458 2839.6500566758264 1.247321730694381 0.9459619404831836 0.8189435770182523 1.0096673740169737 1.0710033908778873 0.6939005310725105 0.8928268188912181 0.9381344584373603 1.0049766194344965 0.8390432202304079 1.0 11.471497435305665 -5.259315296622343 24.372689276183117 0.9628963970287906 1.2473218710834133 0.37680416579307463 0.10923392222237276 110.0246306476708 1262339.4117989382 0.014413048013210243 0.13095549880359872 5.504079566261876e-06 5.259315296622343 0.2844254740546227 LHLS(ph)PVGIPGSAR ddPTM_A549_MK2206_60min_R1 3 LHLSPVGIPGSAR 13 0 C9J7S4;C9JVL3;Q9H7P9;Q9H7P9-3;Q9H7P9-2 C9J7S4;Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 LHLS(1)PVGIPGSAR;LHLS(0.889)PVGIPGS(0.111)AR;LHLS(1)PVGIPGSAR 94.48700000000001 5.3002e-05 27847000.0 676.24 752.63 785.91 545.99 921.8799999999999 570.3100000000001 594.52 872.84 1203.93 884.0799999999999 916.8100000000001 True False 790.3727795193488 790.9356522573541 897.3638556401025 679.7575745104228 786.2726732070516 630.6598256588607 702.5365884084714 996.5677429603926 931.2417772811519 684.3657139797739 689.1407743312337 1.1468959738833537 1.1477127485670917 1.3021488338299758 0.9863842045481684 1.1409463820655192 0.9151393287835493 1.0194384290934424 1.4461018417136857 1.351308487275131 0.9930709943028785 1.0 9.42865490954692 LHLS(ph)PVGIPGSAR ddPTM_A549_PD325901_60min_R1 3 LHLSPVGIPGSAR 13 0 C9J7S4;C9JVL3;Q9H7P9;Q9H7P9-3;Q9H7P9-2 C9J7S4;Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 LHLS(1)PVGIPGSAR;LHLS(0.993)PVGIPGS(0.007)AR;LHLS(1)PVGIPGSAR 89.506 5.7705e-05 48977300.0 2813.3 2664.42 2648.88 3096.61 3143.21 3273.88 3116.65 2861.3 3197.4100000000003 3227.4100000000003 3783.02 True False 3098.9041449580027 2888.960024182803 2828.6489258094275 3287.880566788433 2922.441773085831 3247.2186067314533 3235.255821246319 2804.2291268535737 3063.0339769927914 3023.630781806763 3317.732522539613 0.9340427909438267 0.8707633917309889 0.8525849828437018 0.9910023018587619 0.8808551482772335 0.9787463530199886 0.9751406417687462 0.8452245947503418 0.9232311393952101 0.9113545957262025 1.0 11.695981864759208 -14.999999972530953 0.20427003179741085 1.4103487108376223 0.9033208988803323 0.0 0.055930696025196125 43.54414584906103 0.5177630160983578 7.116152238642109 0.03931444391821012 1.0000000632498212e-15 14.999999972530953 -0.50702781195729 LHLYNS(ph)LTR ddPTM_A549_MK2206_60min_R1 2 LHLYNSLTR 9 0 P49589-3;B4DKY1;P49589-2;P49589;E9PLP0;C9JLN0;E9PRS8 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 LHLY(0.002)NS(0.964)LT(0.034)R;LHLYNS(0.948)LT(0.052)R 100.69 0.00023507 19150100.0 428.88 430.45 551.29 458.82 856.22 490.48 338.66 617.0 584.45 731.69 664.8199999999999 True False 501.2644588907166 452.3580663993968 629.4712116856031 571.2309205972126 730.2711722277755 542.3822680457263 400.19013831395574 704.4616394832525 452.07300817486845 566.4007208192254 499.7268459014312 1.0030769069180419 0.9052106568007402 1.259630569876895 1.1430863186203233 1.4613406868515888 1.0853574757772944 0.8008177699400432 1.4096934060296697 0.9046402287221482 1.1334206386241361 1.0 8.964995913168762 LHLYNS(ph)LTR ddPTM_A549_PD325901_60min_R1 2 LHLYNSLTR 9 0 P49589-3;B4DKY1;P49589-2;P49589;E9PLP0;C9JLN0;E9PRS8 P49589-3 CARS Cysteine--tRNA ligase, cytoplasmic 1 LHLYNS(0.997)LT(0.003)R;LHLYNS(0.845)LT(0.155)R 121.29 3.9478000000000004e-05 31226000.0 785.48 697.4100000000001 817.9300000000001 807.6 1142.75 1064.69 688.28 669.89 885.48 998.6400000000001 950.81 True False 865.2213513601864 756.1831882606081 873.4396484126519 857.4836178073241 1062.4871822734829 1056.0195176368443 714.4728720412676 656.5285184314616 848.2663549396469 935.585699971031 833.8663976811885 1.037601891341574 0.9068397411904335 1.0474575433684683 1.0283225468633947 1.2741695614885573 1.2664133254121022 0.8568193586263582 0.7873305846801513 1.0172689021868513 1.1219851316382372 1.0 9.70367244293747 -7.781386803121926 24.999980990251995 0.9779686769316012 1.0881456947659365 0.21179974893997755 0.12821709477739626 372.50240446312927 466853.7590652645 0.020716006445207318 0.028643280338695974 1.6542959132759155e-08 7.781386803121926 0.11017701783433531 LHNGDLCS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LHNGDLCSPK 10 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 LHNGDLCS(1)PK;LHNGDLCS(1)PK 52.79 0.0069089 6987600.0 4862.799999999999 4777.2 4787.6 4862.6 4780.9 6468.0 5005.3 5672.700000000001 5379.9 5698.299999999999 6537.3 True False 5356.467876195848 5179.791409584857 5112.515326177559 5162.951758234145 4445.106077209618 6415.326752458565 5195.779430505253 5559.553548352941 5153.80151210621 5338.508365522036 5733.253543359061 0.9342806550741766 0.9034645634300807 0.8917301995303321 0.9005273740622359 0.7753199895299364 1.1189679130603885 0.9062532105393499 0.9697030676050739 0.8989313786891491 0.9311481386874533 1.0 12.485138365836852 -7.232668023174183 24.9996172982374 0.9591978187366337 0.8839828323308958 0.29877881888392777 0.06713244252200602 854.2637947231434 742275.927367526 0.00990535214244207 0.017154852929005645 5.8523727143892916e-08 7.232668023174183 -0.07521498640573787 LHPDGS(ph)PDVAGEK ddPTM_A549_MK2206_60min_R1 4 LHPDGSPDVAGEK 13 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK 204.35 4.840699999999999e-76 69522000.0 15486.8 16845.300000000003 15792.800000000001 13537.400000000001 22426.4 17476.6 16642.0 18407.9 24998.399999999998 25549.800000000003 24685.600000000002 True False 18100.5932240924 17702.653817906285 18032.45651455385 16854.063607716987 19127.50626807243 19325.96221197181 19665.6359824628 21017.276196829447 19336.30231424181 19778.082434893244 18555.484232099472 0.9754848215052159 0.9540389028103152 0.9718127691520534 0.9083063204872247 1.030827653367483 1.0415229249872917 1.0598287674132942 1.1326719332105208 1.0420801781497886 1.065888779160976 1.0 14.179558030282166 -6.821149690060766 10.595246439578174 1.0343885512128366 0.9539528480776712 0.6018854184979789 0.03750092921950957 0.3268638688767786 56.42080642363335 0.0060627899490923055 0.011471141264125453 1.5095597583309606e-07 6.821149690060766 -0.08043570313516535 LHPDGS(ph)PDVAGEK ddPTM_A549_PD325901_60min_R1 4 LHPDGSPDVAGEK 13 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK 213.67 1.6373999999999998e-37 129305000.0 27328.8 27034.699999999997 25707.800000000003 26804.9 30636.6 27937.100000000002 28618.0 29199.600000000002 28166.5 29835.6 32787.7 True False 30103.19965760075 29313.00904728789 27452.485901559772 28460.5777946552 28484.790906532293 27709.589520115984 29707.0736503705 28617.19107135693 26982.759956642207 27951.775124224638 28755.02075835497 1.0468849913403055 1.0194048995346592 0.9547023503220133 0.9897602938222808 0.9906023419668664 0.9636435234380685 1.0331091011902298 0.995206760998147 0.9383669093266844 0.9720658996952056 1.0 14.811526258763887 -5.577551792051183 4.869258391104753 0.977459023966468 1.041259571475085 0.4027110858761035 0.024436707909323833 0.14067372201852762 6.838595998450697 0.004015030811881601 0.017451782385414106 2.645137228473405e-06 5.577551792051183 0.06380054750861697 LHPPS(ph)PVPQGVCPAHR ddPTM_A549_PD325901_60min_R1 2 LHPPSPVPQGVCPAHR 16 0 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR 97.095 5.1308e-06 16784300.0 1868.65 1822.24 1588.52 1637.2800000000002 2224.83 1877.16 1664.27 1664.76 1644.29 1757.9 1878.02 True False 2058.3539723725776 1975.806559951837 1696.3265197467588 1738.4110670673294 2068.5656160468275 1861.8730313304152 1727.604705573488 1631.5550558210455 1575.186209472503 1646.9058939949098 1647.0354457496512 1.2497326500679613 1.199613866872516 1.0299271482737717 1.0554788432474131 1.2559326645853186 1.1304389569363398 1.0489177449287774 0.9906010584237549 0.9563766302282305 0.9999213424610407 1.0 10.685655888212679 -7.9343801275649595 2.4067635396435305 0.9797407379585772 1.1512584940031576 0.5841717582020778 0.06640567448668998 0.15880236653926239 1.8688964290841188 0.011184367483368053 0.015845301989398028 1.1631075435540418e-08 7.9343801275649595 0.17151775604458042 LHQLAMQQSHFPMTHGNTGFSGIES(ph)SSPEVK ddPTM_A549_PD325901_60min_R1 1 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 31 0 F8VRH0;F8VZX2;H3BRU6;Q15366-6;Q15366-3;Q15366;Q15366-2;Q15366-4;Q15366-5 F8VRH0;F8VZX2;Q15366-6;Q15366-4 PCBP2 Poly(rC)-binding protein 2 1 LHQLAMQQSHFPMTHGNTGFS(0.002)GIES(0.332)S(0.332)S(0.332)PEVK 55.158 0.00070414 6908600.0 940.34 1632.3 1453.5 1307.0 1622.9 1951.5 1337.1 1570.4 2212.5 1779.5 1438.0 True False 1035.8026245582791 1769.8596495573474 1552.1432506055394 1387.7304215876327 1508.9131027010578 1935.6076310177634 1387.984072189195 1539.0771400450333 2119.516319176004 1667.1420663086299 1261.1351162330518 0.8213256543455631 1.4033862246607094 1.2307509565205943 1.100382031810132 1.1964721965780372 1.534813840406988 1.1005831606172658 1.220390361218535 1.6806417424224094 1.321937709012735 1.0 10.300507136915572 -7.0227705320369465 24.151812027776796 1.3174234592451513 1.1624078207463668 0.11768611018915498 0.2172817370447008 1164.4522794241282 1235089.1494639392 0.040878310285672306 0.07117684813297909 9.48919711110988e-08 7.0227705320369465 -0.1550156384987844 LHQLAMQQSHFPMTHGNTGFSGIESS(ph)SPEVK ddPTM_A549_PD325901_60min_R1 1 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 31 0 F8VRH0;F8VZX2;H3BRU6;Q15366-6;Q15366-3;Q15366;Q15366-2;Q15366-4;Q15366-5 F8VRH0;F8VZX2;Q15366-6;Q15366-4 PCBP2 Poly(rC)-binding protein 2 1 LHQLAMQQSHFPMTHGNTGFSGIES(0.088)S(0.456)S(0.456)PEVK 87.803 3.6988000000000005e-09 5218000.0 1067.9 947.51 825.12 1101.0 1407.2 1386.4 1249.2 1136.7 1414.5 1327.0 1075.2 True False 1176.3124218535709 1027.3599929866343 881.1176050496343 1169.006269447578 1308.363126576456 1375.1096180594543 1296.7389895884692 1114.0276267761003 1355.0534840562514 1243.2129935327628 942.9572162543659 1.2474716790716585 1.0895085962304152 0.9344194941840817 1.2397235519243692 1.3875105932945324 1.4582948137580336 1.3751832715586 1.1814190586517423 1.4370254139830678 1.3184193005819278 1.0 9.881048504367673 -4.896988103701433 18.866364732812198 1.2239116310584603 3.317508052667326 0.0 0.16868322047357506 5149.258871749761 941589.4491887134 0.02748701388814995 729.8969444622882 1.2676865901572518e-05 4.896988103701433 2.093596421608866 LHQLAMQQSHFPMTHGNTGFSGIESSS(ph)PEVK ddPTM_A549_PD325901_60min_R1 1 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 31 0 F8VRH0;F8VZX2;H3BRU6;Q15366-6;Q15366-3;Q15366;Q15366-2;Q15366-4;Q15366-5 F8VRH0;F8VZX2;Q15366-6;Q15366-4 PCBP2 Poly(rC)-binding protein 2 1 LHQLAMQQSHFPMTHGNTGFSGIES(0.029)S(0.151)S(0.821)PEVK 101.11 2.5571e-14 4912600.0 799.08 988.9 1051.2 1403.1 1222.3 1032.7 1042.5 1015.9 1355.7 1470.9 1235.9 True False 880.2020133483952 1072.2380735448519 1122.5407533791158 1489.7663003286968 1136.4498647060839 1024.290033590593 1082.1729079778895 995.6370775418679 1298.7246435737434 1378.0271229746354 1083.892135015598 0.8120752839817669 0.9892479508852804 1.035657255104044 1.3744599229029908 1.0484898155384528 0.9450110398447101 0.9984138393644828 0.918575793086219 1.1982046936386839 1.2713692428027488 1.0 10.082005476758846 -8.762482503647828 24.999999119148764 1.0935966512320234 1.0252357599515582 0.11432067273549251 0.14745645170101937 80.36945694346714 1926154.6106139976 0.02590582424561475 0.028335071817379303 1.7278955905583335e-09 8.762482503647828 -0.06836089128046519 LHQLS(ph)GSDQLESTAHSR ddPTM_A549_PD325901_60min_R1 1 LHQLSGSDQLESTAHSR 17 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 LHQLS(0.921)GS(0.079)DQLESTAHSR 76.807 0.00012948 8036600.0 3650.6 4670.9 3128.5 3703.7 3789.4 3788.3 3313.3 3888.4 4044.4 3729.5 4932.2 True False 4021.206224570321 5064.533135524975 3340.8188231987824 3932.469137287004 3523.24561672031 3757.4493408068606 3439.3894446073273 3810.8428116092105 3874.4279327798567 3494.0187335195483 4325.570667791837 0.9296360026001168 1.170835832884536 0.772341750898787 0.9091214638031777 0.8145157916282277 0.8686597976042322 0.7951296392443643 0.8810034800690494 0.8957033026020855 0.807759022303342 1.0 12.07867476314148 -3.734036689231618 9.834655726934848 0.9229117423405088 17.519562110536747 0.0 0.11163806617150594 0.0 0.0 0.01411997539179692 0.0 0.0001844859558716969 3.734036689231618 16.596650368196237 LHRFDS(ph)Q ddPTM_A549_PD325901_60min_R1 1 LHRFDSQ 7 1 Q8TEB9-2;Q8TEB9 Q8TEB9-2 RHBDD1 Rhomboid-related protein 4 1 LHRFDS(1)Q 47.045 0.0502 9668800.0 3503.1 4112.5 4113.6 3893.9 4837.4 4244.8 4647.2 4711.8 5085.2 4893.5 5303.0 True False 3858.7321331540797 4459.074807820007 4392.773633086312 4134.417359311465 4497.637712124037 4210.231756158957 4824.051739045413 4617.81945266441 4871.48672825935 4584.523574870068 4650.7646184867 0.8296984366432336 0.958783162255787 0.9445271892766022 0.888975834828801 0.9670748965118581 0.9052773256731521 1.0372599206310937 0.9929161829236997 1.0474593164520267 0.9857569563178225 1.0 12.18325220961702 -7.7610556064803555 24.999834362963274 1.0213116439748111 0.9201077936053974 0.5949274250203851 0.03945500602418116 4.9197481487041355 320466.5424317666 0.0056925691478703815 0.00815955552173433 1.7335820180374445e-08 7.7610556064803555 -0.1012038503694137 LHRIET(ph)DEEES(ph)CDNAHGDANQPAR ddPTM_A549_PD325901_60min_R1 1 LHRIETDEEESCDNAHGDANQPAR 24 1 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 LHRIET(1)DEEES(1)CDNAHGDANQPAR 60.458999999999996 0.0021002 16610000.0 1740.6 1715.8 2037.1 1496.3 1807.3 2152.9 2486.9 2410.4 2064.4 1800.6 2613.4 True False 1917.3044306380052 1860.3964876006228 2175.34985607743 1588.7230526561411 1680.3614828465245 2135.367496191721 2581.5403403838977 2362.32268107778 1977.6404471443818 1686.9098087076804 2291.968367707553 0.8365318028170301 0.8117025146648981 0.9491186208007024 0.6931697116942307 0.7331521265833336 0.9316740694495422 1.1263420458834592 1.030696022842844 0.8628567806642267 0.7360092017303635 1.0 11.162371417733187 -7.39450780079548 6.510959986319093 0.9582653948275386 0.8075211517952392 0.29506970924695197 0.11011372702933155 0.2137282113367491 10.48122725245439 0.014859505452643999 0.023811555319439362 4.031737045742054e-08 7.39450780079548 -0.15074424303229939 LHRIET(ph)DEEESCDNAHGDANQPAR ddPTM_A549_MK2206_60min_R1 2 LHRIETDEEESCDNAHGDANQPAR 24 1 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LHRIET(1)DEEESCDNAHGDANQPAR;LHRIET(1)DEEESCDNAHGDANQPAR 235.42 7.401399999999999e-99 85939000.0 3829.7999999999997 4617.9 4466.3 2710.5299999999997 5223.9 3361.3 4533.1 4559.7 6185.5 6495.799999999999 7007.3 True False 4476.176610379751 4852.9313853543335 5099.688499249778 3374.6099716803155 4455.471230058488 3716.9905349496375 5356.705592603181 5206.051438495605 4784.494126213787 5028.394268470966 5267.194018358498 0.8498218586173772 0.9213504132256612 0.9681983389021005 0.640684577009753 0.8458908509026252 0.7056870360184727 1.0169941669003828 0.988391811721804 0.9083572979346709 0.9546628149532351 1.0 12.36281888715155 -7.77970580740115 24.999985900328266 0.9626132086715841 0.8259555802486691 0.4161269978463259 0.08899265885924015 207.87525162952033 284503.5137956768 0.014249412590388689 0.019708479138358943 1.6607114982627723e-08 7.77970580740115 -0.13665762842291496 LHRIET(ph)DEEESCDNAHGDANQPAR ddPTM_A549_PD325901_60min_R1 2 LHRIETDEEESCDNAHGDANQPAR 24 1 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LHRIET(1)DEEESCDNAHGDANQPAR;LHRIET(0.996)DEEES(0.004)CDNAHGDANQPAR 245.62 1.4476999999999996e-99 132593000.0 7735.0 8818.5 9680.5 7922.5 8787.5 8685.5 8529.6 10337.0 9086.0 10307.2 11632.5 True False 8520.251505793954 9561.665943528438 10337.47694357546 8411.854831697037 8170.29631522925 8614.768167668351 8854.198595576216 10130.820425780379 8704.147017416124 9656.401632962245 10201.776244493036 0.8351733366425502 0.9372550146539302 1.0133016737311482 0.8245480620335889 0.8008699778766086 0.8444380626676302 0.8679075470171924 0.9930447583820554 0.8531991693225639 0.946541210230406 1.0 13.316532743120884 -10.926834994894964 0.8935304397443575 1.0088835890376502 0.8848256082072088 0.18863491073796068 0.06710724540744865 0.7668274959017342 0.9499183951853598 0.06843785884144363 0.01205436207044697 1.183491123915585e-11 10.926834994894964 -0.1240579808304414 LHS(ph)GSPPRAPPPPLEALHSGEAGR ddPTM_A549_PD325901_60min_R1 3 LHSGSPPRAPPPPLEALHSGEAGR 24 1 A0A5F9ZGS6 A0A5F9ZGS6 1 LHS(0.564)GS(0.436)PPRAPPPPLEALHSGEAGR;LHS(0.5)GS(0.5)PPRAPPPPLEALHSGEAGR;LHS(0.564)GS(0.436)PPRAPPPPLEALHSGEAGR 123.75 1.222e-16 28672000.0 3167.5699999999997 3182.64 3464.77 3308.1400000000003 3353.92 3522.6800000000003 3599.6 3373.44 4158.24 3654.2299999999996 3734.3900000000003 True False 3489.1393745582095 3450.852242276053 3699.9101275545627 3512.4762944689473 3118.3522295958674 3493.992462020834 3736.584747776698 3306.154092787517 3983.483633469121 3423.5012941652053 3275.0837042486414 1.0653588395410725 1.0536684109170686 1.1297146765301938 1.0724844344931843 0.95214428429739 1.0668406604350937 1.1409127476434782 1.0094868990672115 1.2162997935904658 1.0453171898245004 1.0 11.677316064033159 -7.540968130899304 23.60731136333603 1.09917034638713 1.0547482162778647 0.009734723384791533 0.06929229133700307 325.4755170303271 424754.8070055888 0.013500410770742181 0.020026979347008943 2.8776095697658657e-08 7.540968130899304 -0.04442213010926532 LHS(ph)PDGR ddPTM_A549_MK2206_60min_R1 1 LHSPDGR 7 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 LHS(1)PDGR 55.549 0.012223999999999999 2127200.0 298.64 361.03 265.89 188.93 388.23 386.25 160.62 197.91 284.45 255.3 349.44 True False 349.04313095300245 379.40488491619027 303.5972001579657 235.21785848138992 331.1218812851712 427.12271862800037 189.80257490104404 225.96434857395548 220.02252917331043 197.6275526864495 262.6644039466262 1.3288558544991447 1.4444472841218559 1.1558368610147003 0.8955071754952626 1.2606271588762963 1.6261157287029742 0.7226048602292232 0.8602777733821587 0.8376564386623905 0.7523956414231435 1.0 8.037076890705873 -7.780033648211528 24.999999393431686 0.9019714050690065 1.2677541340283691 0.5792062700375179 0.18697378258669314 162.36781057798805 218302.94631661553 0.029819179710701218 0.041239834101692255 1.6594583311594146e-08 7.780033648211528 0.3657827289593626 LHS(ph)PDGR ddPTM_A549_PD325901_60min_R1 1 LHSPDGR 7 0 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 LHS(1)PDGR 47.603 0.018161 2111200.0 396.53 329.19 345.8 452.21 382.06 373.66 365.03 449.53 452.32 536.76 440.84 True False 436.7854336900425 356.93199659240565 369.26806746432476 480.1419846565748 355.2254236354466 370.61703684657806 378.92141640208064 440.5637715005373 433.3105633851705 502.86888199596524 386.61947471500594 1.1297553854782305 0.9232126675861732 0.9551201934060056 1.2418980834074858 0.9187985781039579 0.9586093331686822 0.9800887983757158 1.139528141528039 1.1207675549830556 1.3006817164775566 1.0 8.594770500285914 -8.222320542936327 24.986685524677142 1.0648100537979381 1.0123110799374666 0.09599430415563248 0.12020030678196818 1317.069482173299 841264.1876712369 0.01596267998255187 0.020607537152528742 5.993485473556666e-09 8.222320542936327 -0.05249897386047153 LHS(ph)PQTHWK ddPTM_A549_MK2206_60min_R1 5 LHSPQTHWK 9 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LHS(1)PQTHWK;LHS(0.997)PQT(0.003)HWK;LHS(0.998)PQT(0.002)HWK;LHS(0.998)PQT(0.002)HWK;LHS(1)PQTHWK 107.85 0.00052947 25382600.0 5090.75 4751.08 3846.29 2898.91 6739.079999999999 5208.710000000001 4749.4400000000005 5210.29 6861.349999999999 6670.8099999999995 7344.66 True False 5949.944143112099 4992.889678496562 4391.751758229274 3609.1430801370143 5747.7702592052965 5759.892234938134 5612.35177025286 5948.864563343913 5307.265180324463 5163.869387921248 5520.778219696165 1.0777364904615843 0.9043814983698701 0.7954950522303309 0.6537381029473128 1.0411159496860976 1.0433116502287476 1.0165870728568651 1.077540941985405 0.9613255539572366 0.9353517171724823 1.0 12.43065593111504 LHS(ph)PQTHWK ddPTM_A549_PD325901_60min_R1 2 LHSPQTHWK 9 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LHS(0.997)PQT(0.003)HWK;LHS(0.999)PQT(0.001)HWK 96.229 0.0010795 24840000.0 1831.5500000000002 1497.53 1358.0500000000002 1344.71 1467.88 1605.6399999999999 1300.76 965.84 2339.0 1870.62 2347.6 True False 2017.4876076841524 1623.7321086819923 1450.2154396180633 1427.769682642009 1364.781172711092 1592.5642001882459 1350.2611336031832 946.5755635131775 2240.6999640916047 1752.5087339579939 2058.860082662526 0.9799051546402946 0.7886558792194248 0.7043778505543897 0.6934758192968662 0.6628819433645785 0.773517449582458 0.6558294781532799 0.4597571109781594 1.0883206600391817 0.8512034152858229 1.0 11.007630074366226 -8.787540500485088 24.999999776511864 1.0417070397464079 0.7144646357773978 0.4258325987776661 0.13183027107868814 104.94497045811714 100517.19735865576 0.020825815047400536 0.02217418466568513 1.6310207999643285e-09 8.787540500485088 -0.32724240396901005 LHS(ph)SNPNLSTLDFGEEK ddPTM_A549_PD325901_60min_R1 1 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.527)S(0.47)NPNLS(0.002)T(0.001)LDFGEEK 51.526 0.00536 2490600.0 1391.7 1642.9 1656.1 1505.4 1767.5 2118.4 1723.5 1504.7 1768.9 1725.6 2007.7 True False 1532.98435948461 1781.3529487580504 1768.4929049383115 1598.385138988541 1643.3568975439773 2101.148452753282 1789.0887356353876 1474.687578085685 1694.5592845154495 1616.6453215072615 1760.7656278589009 0.8706351005662951 1.0116922551039254 1.0043885892347906 0.9077784764189114 0.9333195012117013 1.1933152371382263 1.0160856773487381 0.8375263321552407 0.9623991164434765 0.9181490687509102 1.0 10.78198717223641 -5.251674887497496 22.963780138475542 0.9832486892047982 0.8706349030770492 0.11341818515355762 0.08572636796694903 668.3948021414501 1571799.3759014413 0.01112291042027527 0.18795016388712257 5.601767924722362e-06 5.251674887497496 -0.11261378612774908 LHS(ph)SSLELGPRPLEQENER ddPTM_A549_PD325901_60min_R1 1 LHSSSLELGPRPLEQENER 19 1 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 LHS(0.648)S(0.339)S(0.013)LELGPRPLEQENER 127.92 5.8793e-17 16878000.0 3169.1 3256.0 3140.6 2815.4 3113.1 3351.8 3201.5 3378.7 2808.6 2822.0 3964.9 True False 3490.824699031884 3530.3945469329947 3353.7400019619968 2989.30086376268 2894.446595611969 3324.5040520857497 3323.334834428021 3311.309177961127 2690.564309169593 2643.8184383944676 3477.242435571927 1.0039060444336614 1.0152857076680433 0.9644826508653783 0.85967571118492 0.8323971219268461 0.9560748534747893 0.955738604944699 0.9522802160949965 0.773763796750357 0.760320422685633 1.0 11.763727940857425 -6.035121895198427 4.305723548159712 0.8981904541540495 1.0070480037553335 0.2984499317702666 0.07411218941975319 0.24346840029046213 10.211561288627957 0.012008868377178608 0.03575969126414432 9.223125216161206e-07 6.035121895198427 0.10885754960128402 LHSS(ph)NPNLSTLDFGEEK ddPTM_A549_MK2206_60min_R1 4 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.123)S(0.877)NPNLSTLDFGEEK;LHS(0.017)S(0.983)NPNLSTLDFGEEK;LHS(0.015)S(0.985)NPNLSTLDFGEEK;LHS(0.118)S(0.882)NPNLSTLDFGEEK 182.77 1.0947000000000001e-39 153578700.0 18768.93 18437.98 16974.719999999998 14046.27 23266.29 16179.26 17595.68 19569.7 25369.440000000002 27300.7 27532.1 True False 21936.66652771811 19376.394427019983 19381.99054295169 17487.60678056102 19843.84956166799 17891.33855427642 20792.58729382893 22343.76490469273 19623.30234667094 21133.452908840394 20695.119722696054 1.059992250427064 0.9362784408427537 0.9365488483594385 0.8450111434427993 0.9588661398225936 0.8645196932422301 1.0047096886821092 1.0796634764179995 0.9482091724818742 1.0211805098022035 1.0 14.337002974232187 -7.807298517300276 24.99895049457728 0.986376104312693 0.9309248331292821 0.24340720394185866 0.061187170131423274 175.71796577619668 95787.56038885946 0.00947786150890874 0.013095571206369287 1.558480894834937e-08 7.807298517300276 -0.055451271183410866 LHSS(ph)NPNLSTLDFGEEK ddPTM_A549_PD325901_60min_R1 4 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.141)S(0.859)NPNLSTLDFGEEK;LHS(0.012)S(0.988)NPNLSTLDFGEEK;LHS(0.18)S(0.82)NPNLSTLDFGEEK;LHS(0.025)S(0.97)NPNLS(0.005)TLDFGEEK 289.58 1.4357999999999995e-132 272350200.0 16094.1 15306.3 16150.0 16867.800000000003 18989.2 17321.9 16061.199999999999 17405.3 18274.4 19246.0 21201.3 True False 17727.96118414978 16596.21561846452 17246.036117839336 17909.685696446737 17655.464101183654 17180.836189457634 16672.41775502587 17058.13763730629 17506.390518937853 18030.804275457096 18593.67450611393 0.9534404390224488 0.8925732034841952 0.9275216747592593 0.9632138978531497 0.9495414204103779 0.9240151097518821 0.8966714862919474 0.9174161692298781 0.9415239851155532 0.9697278646847479 1.0 14.182524285250608 -10.159472308579526 0.7418519425415647 0.9982118393107546 0.928041570683544 0.45717175945668687 0.02259199354047562 0.34226569543732055 0.3652993960908321 0.01245891521289709 0.004637219254065893 6.92672094084878e-11 10.159472308579526 -0.07017026862721065 LHSS(ph)SLELGPRPLEQENER ddPTM_A549_MK2206_60min_R1 2 LHSSSLELGPRPLEQENER 19 1 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 LHS(0.003)S(0.993)S(0.003)LELGPRPLEQENER;LHS(0.004)S(0.991)S(0.005)LELGPRPLEQENER 167.45 2.4612e-34 37341000.0 923.33 1393.13 1045.68 942.04 1527.8200000000002 1225.21 1344.8899999999999 967.9200000000001 1404.26 1621.6399999999999 2103.9 True False 1079.1655307488477 1464.0343664606612 1193.9731477723176 1172.839842289783 1303.0797018909168 1354.8609089714244 1589.2391044618662 1105.12562413068 1086.1973521424254 1255.3103977221067 1581.4435653139515 0.6823926913475471 0.9257582114035274 0.7549894121800594 0.7416261117461681 0.8239811590318916 0.8567241592983779 1.0049293818122225 0.6988081322467478 0.6868391487158704 0.7937750200228612 1.0 10.627026358067566 -11.01001250235303 1.311799804532113 0.9992837788960053 0.791341140948111 0.0 0.11387404639681738 0.3880842258083155 1.1958652485553418 0.0708113992225631 0.01631308626375897 9.772090889178034e-12 11.01001250235303 -0.20794263794789425 LHSS(ph)SLELGPRPLEQENER ddPTM_A549_PD325901_60min_R1 5 LHSSSLELGPRPLEQENER 19 1 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 LHS(0.163)S(0.697)S(0.14)LELGPRPLEQENER;LHS(0.029)S(0.934)S(0.038)LELGPRPLEQENER;LHS(0.024)S(0.963)S(0.013)LELGPRPLEQENER;LHS(0.127)S(0.848)S(0.025)LELGPRPLEQENER;LHS(0.018)S(0.924)S(0.058)LELGPRPLEQENER 148.66 2.8168000000000004e-21 92532000.0 5286.33 6072.52 5302.6 5190.39 6315.02 6824.09 5684.550000000001 6110.700000000001 6130.57 6016.17 7224.27 True False 5822.994330009541 6584.272571910796 5662.466323124143 5510.988602069043 5871.474780836304 6768.516873559826 5900.878660955116 5988.817294748586 5872.923462531453 5636.307999474006 6335.73058842069 0.9190722756822652 1.0392286224960932 0.8937353386637023 0.8698268534557069 0.9267241873521469 1.0683088207585887 0.9313651485970192 0.9452449423423829 0.9269528400189438 0.8896066398048927 1.0 12.629295274275771 LHSYS(ph)SPSTK ddPTM_A549_MK2206_60min_R1 2 LHSYSSPSTK 10 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LHSYS(0.644)S(0.356)PS(0.001)TK;LHSYS(0.604)S(0.396)PSTK 148.96 3.1238e-08 19762000.0 2708.55 2993.8 3260.2 2449.35 3547.0 2971.1000000000004 2518.7 3106.3 4567.1 4947.9 5209.4 True False 3165.6870223103224 3146.1716324463077 3722.545383259997 3049.440859955501 3025.2409986824864 3285.4998299434355 2976.315187419122 3546.627537644779 3532.6591421600483 3830.165953534209 3915.762207874182 0.808447207530749 0.8034634039114251 0.9506566501342583 0.7787604808645936 0.7725803657328957 0.839044777370966 0.760085783920706 0.9057310810428906 0.9021638584325284 0.9781405892911863 1.0 11.935077441856759 -9.277888087186346 0.678643547905052 0.9858274706167173 0.8189013364926715 0.591731033105277 0.05311937030111172 0.2997589471483575 0.30426980347986465 0.01895541349880085 0.013513625652640568 5.273657401471718e-10 9.277888087186346 -0.16692613412404578 LHSYS(ph)SPSTK ddPTM_A549_PD325901_60min_R1 3 LHSYSSPSTK 10 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LHS(0.001)YS(0.56)S(0.438)PSTK;LHS(0.01)Y(0.009)S(0.546)S(0.431)PS(0.003)T(0.001)K;LHSYS(0.595)S(0.404)PS(0.001)TK 97.163 0.00016021 28889000.0 2018.0 1789.6 1857.0 1812.7 2014.3 2025.7 1903.6 1997.5 2333.5 2552.8 2336.3 True False 2222.8658744269187 1940.415872601746 1983.0271870481527 1924.6663620596048 1872.8225169577559 2009.2033708186943 1976.0425396898897 1957.6582954915634 2235.4311099648394 2391.615772336427 2048.9499110259267 1.0848805343972079 0.947029433057328 0.9678260929547243 0.9393428076023137 0.9140401660770798 0.9806015071460039 0.9644172017365072 0.9554446816668872 1.0910130589017377 1.1672397453283399 1.0 11.000669001076757 -8.742886051769098 24.98583079857262 1.0429783909217096 0.9658001377972092 0.3895073928714087 0.05865094102240276 201.65750188971205 271572.82711743726 0.008401750999914004 0.0095182398763301 1.807648346431127e-09 8.742886051769098 -0.07717825312450044 LHSYSS(ph)PSTK ddPTM_A549_MK2206_60min_R1 2 LHSYSSPSTK 10 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LHSYS(0.142)S(0.856)PS(0.002)TK;LHSYS(0.385)S(0.595)PS(0.018)T(0.002)K 123.79 2.6279e-05 21636100.0 2598.15 3182.3 3555.2 2557.22 3730.7 2685.8900000000003 2984.9 3020.2 4898.8 5066.2 5282.4 True False 3036.65420133118 3344.265477297713 4059.3808191417525 3183.7390147979695 3181.9189720284066 2970.1090970505124 3527.217692828577 3448.3225989745847 3789.2296217761045 3921.7419013712915 3970.634293176677 0.7647781127940964 0.8422496836449165 1.0223507176466948 0.8018212657531959 0.8013628899282829 0.7480187994533988 0.8883260034523734 0.868456358446393 0.9543134275266028 0.9876865034159896 1.0 11.955153775286096 -8.763307652000709 1.4344832201301756 0.9844722641309454 0.8382606333884612 0.4514869239453516 0.069332688154908 0.2560839117601628 1.0354431681897773 0.014171496927477826 0.015145287228416982 1.7246157501415317e-09 8.763307652000709 -0.1462116307424841 LHSYSS(ph)PSTK ddPTM_A549_PD325901_60min_R1 2 LHSYSSPSTK 10 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LHSYS(0.397)S(0.598)PS(0.004)T(0.001)K;LHSYS(0.11)S(0.889)PSTK 130.94 1.1675e-06 38261400.0 4036.2 3975.8999999999996 4257.1 4638.0 5317.9 4542.9 3836.4 4894.200000000001 4475.8 4577.1 5397.200000000001 True False 4445.9520527066015 4310.963046422263 4546.0124060219105 4924.478726337755 4944.389049759045 4505.904128593696 3982.3963013586344 4796.581341574376 4287.697691013768 4288.101124867227 4733.378615669703 0.939276659168657 0.9107581278520491 0.9604159681992218 1.0403728765823677 1.0445792426979743 0.9519424695242085 0.8413432824019264 1.013352560831589 0.905842958942578 0.9059281906314447 1.0 12.208654610309582 -7.480753148168114 24.95637091693517 0.9494760364249697 0.9797138609255824 0.0969057933214309 0.05782051939146981 1302.9865761226492 771925.7749884198 0.00935158551259571 0.014948542347168844 3.3055737558516466e-08 7.480753148168114 0.030237824500612742 LHVAILER ddPTM_A549_MK2206_60min_R1 2 LHVAILER 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 69.423 0.0076040000000000005 1795360.0 0.0 0.0 0.0 0.0 0.0 0.0 203.99 0.0 157.8 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 241.052342510671 0.0 122.05855195481945 0.0 0.0 0.0 LHVAILER ddPTM_A549_PD325901_60min_R1 1 LHVAILER 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 81.548 0.003979099999999999 1194000.0 103.2 0.0 0.0 138.05 128.0 144.78 0.0 0.0 0.0 0.0 0.0 False True 113.67678802817542 0.0 0.0 146.57703496570215 119.00972157602779 143.60095968165606 0.0 0.0 0.0 0.0 0.0 0.0 LHVGNIS(ph)PTCTNK ddPTM_A549_MK2206_60min_R1 3 LHVGNISPTCTNK 13 0 E9PB51;Q9BWF3;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2 E9PB51 RBM4 RNA-binding protein 4 1 LHVGNIS(1)PTCTNK;LHVGNIS(1)PTCTNK;LHVGNIS(0.978)PT(0.018)CT(0.004)NK 140.93 8.5531e-13 77023500.0 10781.0 12718.9 10560.3 6987.94 14271.599999999999 11587.5 11631.0 9758.4 15448.500000000002 15501.0 16573.3 True False 12600.569229856408 13366.237683185707 12057.90933404102 8699.98561370055 12172.266545474198 12813.68155884002 13744.20214589742 11141.683083846632 11949.439416185227 11999.313334087954 12457.692210189509 1.0114689797481138 1.072930480033298 0.9679087531299341 0.6983625431510162 0.9770883996891613 1.0285758664320939 1.103270325996306 0.8943617241348703 0.9592016895722815 0.9632051532203827 1.0 13.604749213137257 -6.975013632216982 24.998238202198127 0.9869510869091455 0.9355190018785547 0.05998412445667889 0.09875697705236644 599.499447545986 599781.3946049775 0.01453302131395987 0.027464116926385 1.0592204764242111e-07 6.975013632216982 -0.05143208503059071 LHVGNIS(ph)PTCTNK ddPTM_A549_PD325901_60min_R1 3 LHVGNISPTCTNK 13 0 E9PB51;Q9BWF3;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2 E9PB51 RBM4 RNA-binding protein 4 1 LHVGNIS(1)PTCTNK;LHVGNIS(0.986)PT(0.013)CT(0.001)NK;LHVGNIS(1)PTCTNK 134.51 7.8764e-09 133789600.0 15626.7 16213.7 17950.7 16673.600000000002 16815.8 15533.1 17385.0 18020.8 16133.8 17262.300000000003 19799.9 True False 17213.11108023147 17580.085400985106 19168.942448328093 17703.490403506934 15634.716219360693 15406.603583582892 18046.59568843702 17661.361006955885 15455.752492800812 16172.355431997465 17364.63782190738 0.99127383230045 1.012407260162139 1.103906838998069 1.0195139446658688 0.9003767530144393 0.8872401337473209 1.0392727952937364 1.0170877842712134 0.8900705359544958 0.9313384821418088 1.0 14.083864699973619 -6.600811108317102 7.629686317727926 0.9519679724259996 1.038113796900173 0.3341398343743832 0.054331579042211024 0.22699084543641357 19.077389173896663 0.008774357075718867 0.018329144058453192 2.50719949519598e-07 6.600811108317102 0.0861458244741734 LHVGNIS(ph)PTCTNQELR ddPTM_A549_MK2206_60min_R1 2 LHVGNISPTCTNQELR 16 0 Q9BQ04;E9PLB0;E9PM61;U3KQD5 Q9BQ04 RBM4B RNA-binding protein 4B 1 LHVGNIS(0.985)PT(0.013)CT(0.002)NQELR;LHVGNIS(0.996)PT(0.004)CTNQELR 75.55 0.00015314 5637400.0 4887.5 5000.200000000001 4129.4 4136.0 6084.8 4836.8 4849.1 4656.6 7039.8 7209.9 6878.4 True False 5712.390512097504 5254.688822419015 4715.011013322441 5149.320185672093 5189.7339804858175 5348.626965592011 5730.118702232929 5316.6873102394065 5445.296540250553 5581.178582506977 5170.303445817518 1.1048462768115677 1.0163211651861093 0.9119408682166648 0.995941580534814 1.0037581033438217 1.0344899524067097 1.1082751258764647 1.0283124319405865 1.0531870319246908 1.0794682828571376 1.0 12.336033239656684 -7.245513092147924 6.949806491635182 1.0334935499268598 1.00117254694187 0.1072851303756468 0.05064636915623148 0.3590782446655986 89.90127023235657 0.007597230549306087 0.012919247731505152 5.681812630317357e-08 7.245513092147924 -0.032321002984989855 LHVGNIS(ph)PTCTNQELR ddPTM_A549_PD325901_60min_R1 2 LHVGNISPTCTNQELR 16 0 Q9BQ04;E9PLB0;E9PM61;U3KQD5 Q9BQ04 RBM4B RNA-binding protein 4B 1 LHVGNIS(0.997)PT(0.002)CTNQELR;LHVGNIS(0.993)PT(0.006)CTNQELR 62.361999999999995 0.0011824000000000001 4265700.0 2598.3 2465.7 2269.5 2776.9 2854.3 2848.3 2526.6 3481.8 2637.0 2808.2 2946.4 True False 2862.0775032326383 2673.493192374902 2423.52191761216 2948.422806202525 2653.8238148004384 2825.104389150856 2622.751145608571 3412.3527675807404 2526.1760604145193 2630.88977274959 2584.0114787684756 1.1076102125508696 1.034628992301951 0.937891312606396 1.1410254290386224 1.0270170378907275 1.0933017954306008 1.0149920645316013 1.320564090221088 0.9776179715805595 1.0181416740468414 1.0 11.335396763488651 LIAPVAEEEATVPNNK ddPTM_A549_MK2206_60min_R1 1 LIAPVAEEEATVPNNK 16 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 205.12 2.2378e-39 5426800.0 1975.0 2824.8 2026.5 1918.7 3164.7 1935.1 2406.6 2683.7 2945.8 3220.4 3316.2 False True 2308.331715885948 2968.5702543036746 2313.888172252127 2388.7815861337153 2699.17682225274 2139.8709975845804 2843.8480684650244 3064.122693486556 2278.5810034759643 2492.9094033350652 2492.6960175360646 0.9260381930435491 1.1909074485696791 0.9282672880984972 0.9583124333367112 1.0828343300844094 0.8584564594040479 1.1408723921643924 1.2292404175761973 0.9141030384155125 1.000085604420876 1.0 11.2834912426087 LIAPVAEEEATVPNNK ddPTM_A549_PD325901_60min_R1 1 LIAPVAEEEATVPNNK 16 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 95.65100000000001 6.0429999999999996e-06 2414800.0 2249.2 2315.2 1658.0 1572.2 2286.5 2673.7 2067.8 2067.9 2294.9 2108.3 1998.7 False True 2477.5371282264746 2510.310029195105 1770.5218503639394 1669.3112232747342 2125.9041279967787 2651.9262736624096 2146.4912605435775 2026.6541122638316 2198.4533337297225 1975.18157819527 1752.8725708032005 1.413415424197789 1.432112106155459 1.010068775023761 0.9523289091743977 1.212811566229625 1.512903058576155 1.2245563632500753 1.1561902137216848 1.2542003168674996 1.126825538316344 1.0 10.775505404460326 -10.745171743014673 0.6882412342364133 0.9745932588856544 1.2391667739118615 0.13051409993999374 0.16511222932126207 1.2210142763394347 0.8662436993469471 0.19162138897060885 0.034117318478528016 1.7981596870368158e-11 10.745171743014673 0.2645735150262071 LIASMSSDSLRHVYGELDVQIQRRPS(ph)M ddPTM_A549_PD325901_60min_R1 1 LIASMSSDSLRHVYGELDVQIQRRPSM 27 3 P00488 P00488 F13A1 Coagulation factor XIII A chain 1 LIAS(0.002)MS(0.006)S(0.006)DS(0.006)LRHVYGELDVQIQRRPS(0.98)M 40.544000000000004 0.026366000000000004 68742000.0 3728.3 3601.4 4528.9 4045.4 4481.2 4201.7 3308.4 4674.9 4344.2 5237.1 5115.1 True False 4106.794271370605 3904.9026171144014 4836.258388488088 4295.275170230003 4166.4559713007475 4167.482748269195 3434.302972425944 4581.655452111894 4161.62838136244 4906.428612230922 4485.975127290461 0.915474151068492 0.8704690744625173 1.0780840845653994 0.9574897426647924 0.928773756669778 0.9290026426843708 0.7655644257885733 1.0213287684631511 0.9276976049298947 1.0937262184943088 1.0 12.131205906014898 -10.668923586769528 0.7625000699822195 1.0035092920610076 0.9325102046981046 0.18792555497010943 0.08037241795769205 1.5023944447964988 1.4268752830163787 0.06532258681074556 0.014185613225005582 2.143267671532795e-11 10.668923586769528 -0.07099908736290295 LIDEVIEDTR ddPTM_A549_MK2206_60min_R1 2 LIDEVIEDTR 10 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;H0YD14 Q9NZM1-5 MYOF Myoferlin 0 ; 116.52 0.00022233 1193180.0 374.12 422.80999999999995 389.65 271.35 739.6099999999999 707.9 335.54600000000005 486.66 416.11 533.35 523.96 False True 437.2623096441779 444.32922303247483 444.9082291231389 337.8307621813643 630.8143487554428 782.8095081340105 396.5103648222246 555.6455453337436 321.8617493911276 412.86586457233795 393.8462714396586 1.110236001589699 1.1281793310072017 1.1296494632203304 0.857773163489561 1.601676579162665 1.9876016732938528 1.006764297584506 1.4108183462106847 0.8172268540580565 1.0482919212695743 1.0 8.621488807502136 -8.764674390480804 24.992819338181487 0.9136904472023177 1.280324709007478 0.1853221644531421 0.29902495176506433 91.58381661345668 707550.4613159097 0.05303203631316862 0.057607526571310706 1.7191968609714145e-09 8.764674390480804 0.36663426180516034 LIDLES(ph)PTPESQK ddPTM_A549_MK2206_60min_R1 2 LIDLESPTPESQK 13 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 LIDLES(0.978)PT(0.022)PESQK;LIDLES(0.834)PT(0.166)PESQK 194.3 1.1625999999999999e-27 28920000.0 6988.5 7056.4 5879.9 5720.5 8979.0 6350.200000000001 6217.2 7309.9 9294.400000000001 9363.2 9549.1 True False 8167.987947579217 7415.5406196787135 6713.758235393673 7122.0227568029995 7658.200994409378 7022.1739490783975 7346.784763259689 8346.100710629864 7189.233240106935 7248.046616975185 7177.794928247274 1.1379522582116643 1.0331223856084022 0.9353510796153502 0.9922299018010684 1.0669294777803597 0.9783191104337001 1.0235434192118498 1.1627666705529405 1.0015935690520563 1.009787363588704 1.0 12.809324990175092 -10.845301408353256 0.00514175895664773 7.5150355652548606e-06 2.01179526104212 0.009501805194724322 0.06425755144699018 36435.082860284805 40.49732705726585 8133.225278625234 7714.894068586033 1.427902623881255e-11 10.845301408353256 2.0117877460065547 LIDLES(ph)PTPESQK ddPTM_A549_PD325901_60min_R1 3 LIDLESPTPESQK 13 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 LIDLES(0.98)PT(0.02)PESQK;LIDLES(0.822)PT(0.154)PES(0.024)QK;LIDLES(0.981)PT(0.019)PESQK 172.57 9.2175e-22 45398300.0 5841.08 6304.169999999999 6471.2699999999995 6657.929999999999 7492.79 6792.79 7323.11 8423.720000000001 8821.1 9713.6 10448.89 True False 6434.062141624174 6835.444530386542 6910.449297107753 7069.1752148438745 6966.522279122227 6737.471770382349 7601.794958409557 8255.702296319498 8450.37984320156 9100.281638266657 9163.74277097106 0.7021216442266387 0.7459227851789872 0.754107734123518 0.7714288136980051 0.7602267384884268 0.7352314375001161 0.8295513250863559 0.9009094321669465 0.9221537590481813 0.9930747583939791 1.0 13.161721246987252 -8.37371129808435 0.6718574907644973 0.9819030419706719 0.7335160700483897 0.9479137194793323 0.023381393010367364 0.10338556655892063 0.09670761782453724 0.006701915005095431 0.008598851174052586 4.229496811717966e-09 8.37371129808435 -0.2483869719222822 LIDLHS(ph)PSEIVK ddPTM_A549_PD325901_60min_R1 1 LIDLHSPSEIVK 12 0 P60866;P60866-2;G3XAN0 P60866 RPS20 40S ribosomal protein S20 1 LIDLHS(0.999)PS(0.001)EIVK 69.92 0.001031 1814600.0 368.2 299.5 547.28 291.15 460.39 350.31 416.31 651.28 629.63 434.21 390.95 True False 405.5793929454862 324.7399160953414 584.4217118619882 309.13367425037455 428.05379465927666 347.4571915049103 432.1529048635729 638.2897094807241 603.1688406973054 406.7939064972578 342.8656284362391 1.182910619519593 0.947134647402347 1.7045211400380136 0.9016175685509477 1.2484593355466063 1.0133917275103157 1.26041477774999 1.86163224465477 1.7591989125543785 1.1864528630431297 1.0 8.421499474129831 -8.009140418004057 24.8339232601096 1.4136315245441198 1.1695684942376747 0.16229655243120378 0.29864306071916646 794.3937404034406 2158320.536650249 0.056833906050257406 0.07629373173955994 9.791733435857645e-09 8.009140418004057 -0.24406303030644505 LIDLHSPSEIVK ddPTM_A549_MK2206_60min_R1 2 LIDLHSPSEIVK 12 0 P60866;P60866-2;G3XAN0 P60866 RPS20 40S ribosomal protein S20 0 ; 110.66 8.4585e-05 8707300.0 2114.25 1942.23 2191.61 2114.37 2903.3 2430.67 2444.31 2218.73 3397.1000000000004 3729.6 3568.5 False True 2471.083711550311 2041.0812110649335 2502.41325299259 2632.3907449176763 2476.228415978253 2687.881886051837 2888.4094873388804 2533.2417720756525 2627.6622740539738 2887.0807696803045 2682.342964410303 0.9212407750749964 0.7609322290796818 0.9329206914234887 0.9813773927661751 0.9231587641227068 1.0020649565380062 1.076823331565984 0.9444138224257875 0.979614579089311 1.0763279744560972 1.0 11.389277996707037 -5.969017164113221 5.627915283858834 0.9877501043896106 0.8404669325138141 0.5284813768425285 0.05659317642408992 0.08419194410634931 7.454469699714744 0.006346073056462504 0.019907351822321704 1.0739469671517015e-06 5.969017164113221 -0.14728317187579654 LIDLHSPSEIVK ddPTM_A549_PD325901_60min_R1 2 LIDLHSPSEIVK 12 0 P60866;P60866-2;G3XAN0 P60866 RPS20 40S ribosomal protein S20 0 ; 107.03 0.00014739 15419300.0 2592.9 2378.0 2396.8999999999996 2821.8999999999996 3054.6000000000004 3318.6 2768.4 2878.3 3388.1000000000004 3077.8999999999996 3268.8 False True 2856.1292992079066 2578.402405591727 2559.5680477305955 2996.202354000109 2840.055433797925 3291.5744218783225 2873.752976926609 2820.89004851733 3245.7099394351267 2883.5608687223 2866.758322630459 0.9962923196773701 0.8994139426534761 0.8928440278781525 1.0451534509720637 0.9906853365971806 1.1481869245462113 1.0024399176731897 0.9839999508326039 1.132188198012085 1.0058611658887322 1.0 11.48520457032214 -6.292803954706364 9.79491987691703 1.0538891309643377 0.9265281133578632 0.38394206092779193 0.05921665150546568 0.36259237678553297 111.62798698774685 0.009130061924100956 0.021388493309591788 5.095608405015556e-07 6.292803954706364 -0.12736101760647445 LIEDNEY(ph)TAR ddPTM_A549_MK2206_60min_R1 2 LIEDNEYTAR 10 0 J3QRU1;P07947;Q573B4;P06241-3;P06239;P06241-2;P06241;P06239-3;P12931;P12931-2 J3QRU1;P12931 YES1;LCK;FYN;SRC Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Lck;Proto-oncogene tyrosine-protein kinase Src 1 LIEDNEY(1)TAR;LIEDNEY(1)TAR 231.26 2.0007e-35 118245000.0 23154.0 26270.0 20013.5 16162.8 28311.0 21432.7 18342.7 19476.3 27863.0 28096.0 28232.0 True False 27061.829139049758 27607.030791757814 22851.715240744114 20122.68672557567 24146.48940335492 23700.694088125172 21675.331158245423 22237.125168667222 21552.07498806801 21749.09408648055 21221.215236438726 1.2752252327464346 1.3009165820227897 1.0768334888524986 0.9482344201958433 1.137846684759751 1.11683962600921 1.0213991478219842 1.047872373043184 1.0155909898628788 1.0248750528261645 1.0 14.373219654340469 -5.82551879409159 4.362997896082622 1.0251053438580926 1.2904018943039357 0.768776571453029 0.051541598947007085 0.06420573217808222 2.383858888574489 0.007456857048962618 0.026079022349977755 1.494449368677939e-06 5.82551879409159 0.2652965504458431 LIEDNEY(ph)TAR ddPTM_A549_PD325901_60min_R1 2 LIEDNEYTAR 10 0 J3QRU1;P07947;Q573B4;P06241-3;P06239;P06241-2;P06241;P06239-3;P12931;P12931-2 J3QRU1;P12931 YES1;LCK;FYN;SRC Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Lck;Proto-oncogene tyrosine-protein kinase Src 1 LIEDNEY(1)TAR;LIEDNEY(1)TAR 248.96 1.1134e-57 200502000.0 34146.0 35086.0 38850.0 33244.0 39605.0 32962.0 30119.0 34425.0 33139.0 35473.0 38846.0 True False 37612.476783043385 38042.82035432769 41486.59462402836 35297.406377398074 36823.28142983264 32693.56840051627 31265.195026749192 33738.366369109935 31746.28307397678 33233.22872613995 34068.18826508285 1.1040351336085914 1.1166669638643074 1.2177517131590112 1.036081111879233 1.0808699641822028 0.9596509255534597 0.9177240299212946 0.9903187720636453 0.9318453575212324 0.9754915191718995 1.0 15.056137606981386 -6.900943448006048 1.5666732569522257 0.9643461752182655 1.1371646100424078 0.7427717344412852 0.04418892807302025 0.14475349378891614 0.7127995837002621 0.00693355015754016 0.01610784547403837 1.256193529263284e-07 6.900943448006048 0.17281843482414228 LIEGVHPGSLVEKLPDS(ph)PALAK ddPTM_A549_MK2206_60min_R1 2 LIEGVHPGSLVEKLPDSPALAK 22 1 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 LIEGVHPGSLVEKLPDS(1)PALAK;LIEGVHPGSLVEKLPDS(1)PALAK 116.2 2.5828000000000005e-15 11181300.0 3281.7 3847.3 3742.1 3041.8 4820.9 4302.2 3569.2 3884.4 6204.9 5497.299999999999 5747.1 True False 3835.570730138186 4043.1111368530565 4272.786049535987 3787.0411365515893 4111.751996207615 4757.4559484307665 4217.677439526874 4435.025595476088 4799.500057189222 4255.456111959336 4319.936458109136 0.8878766545138119 0.9359191219730931 0.9890853930305756 0.8766427870583082 0.9518084434990406 1.1012791494884941 0.9763285827062786 1.0266413958823197 1.1110117252256981 0.9850737744003709 1.0 12.07679437662374 -7.116650975471062 5.7149536667461405 1.0480339102282137 0.9265679598036141 0.5236643374680818 0.04930188198614584 0.13662475539196023 5.9472435456861845 0.007828251703354687 0.013703406331929445 7.644498935676465e-08 7.116650975471062 -0.12146595042459962 LIEGVHPGSLVEKLPDS(ph)PALAK ddPTM_A549_PD325901_60min_R1 2 LIEGVHPGSLVEKLPDSPALAK 22 1 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 LIEGVHPGSLVEKLPDS(1)PALAK;LIEGVHPGSLVEKLPDS(1)PALAK 142.28 3.834300000000001e-27 26269000.0 5104.4 6050.5 5935.1 6278.0 6845.0 6534.700000000001 5907.5 7532.5 6251.0 6613.700000000001 6830.2 True False 5622.594930339325 6560.396869231595 6337.891576655623 6665.777801627515 6364.230813968049 6481.4835697728795 6132.313145208039 7382.258378368066 5988.292208438055 6196.109853298899 5990.128700205141 0.9386434268343468 1.0952013216355307 1.0580559940955145 1.1127937537300718 1.06245310117462 1.0820274311553457 1.0237364591178197 1.2324039679005976 0.9996934136378367 1.0343867658614252 1.0 12.548371284863636 -8.915555876183415 24.999962832681394 0.9998226472927437 1.0775722391373401 0.14779471589514082 0.06711473796430056 25.364643432527334 7506.2175856652175 0.010559386970980383 0.011241301530218828 1.2146303364831137e-09 8.915555876183415 0.0777495918445964 LIESLS(ph)PDFCHQNK ddPTM_A549_MK2206_60min_R1 2 LIESLSPDFCHQNK 14 0 Q9H6R7-2;Q9H6R7 Q9H6R7-2 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 LIES(0.001)LS(0.999)PDFCHQNK;LIES(0.102)LS(0.898)PDFCHQNK 140.84 2.0605999999999998e-13 7685200.0 2383.7 2781.6 2114.3 2029.08 3780.1000000000004 2598.4 2335.16 2793.7 3657.6 3456.0 4241.9 True False 2786.0102841302964 2923.1715588257925 2414.139532490832 2526.204691088861 3224.0522974681894 2873.3609633216756 2759.428345199364 3189.7155303474274 2829.159439986993 2675.2871997037573 3188.519159515779 0.8737630682932421 0.9167803022609772 0.7571350246668904 0.7922814838824743 1.0111440879526679 0.9011584436450542 0.865426302038725 1.0003752120566936 0.8872957314820215 0.8390375173753188 1.0 11.638670834906339 -14.999999998704453 0.1009658898635722 1.3620320897850728 0.8067692250635061 0.0 0.08150544995484645 101.45116926829805 0.7357176058701203 7.820195617975104 0.46481868920948183 1.0000000029831068e-15 14.999999998704453 -0.5552628647215667 LIESLS(ph)PDFCHQNK ddPTM_A549_PD325901_60min_R1 2 LIESLSPDFCHQNK 14 0 Q9H6R7-2;Q9H6R7 Q9H6R7-2 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 LIES(0.01)LS(0.99)PDFCHQNK;LIES(0.01)LS(0.99)PDFCHQNK 107.07 1.1974000000000002e-09 4881500.0 1561.2 1672.0 1803.1 1972.9 1739.2 1772.6 1793.4 1743.4 1733.9 1738.6 2218.2 True False 1719.6918747053035 1812.905307884511 1925.4692089211205 2094.761552219006 1617.0445919142776 1758.1645333036577 1861.6488183861359 1708.6265193291588 1661.0302127996727 1628.8244992886669 1945.3754623283419 0.8839897017345295 0.9319050964664258 0.989767397711804 1.0767903640112073 0.8312249348405484 0.9037661712867402 0.9569611904932753 0.8783016710225039 0.8538352852521601 0.8372802735669299 1.0 10.925832910497311 -6.775624080997045 24.99998744296908 0.9195928239091741 0.9692164832306895 0.17303814465431822 0.06699775786195387 455.75801315865374 803255.455833937 0.010755013772928965 0.02039472755741108 1.6763933099271972e-07 6.775624080997045 0.04962365932151547 LIEVDDER ddPTM_A549_MK2206_60min_R1 2 LIEVDDER 8 0 P62753;A2A3R7 P62753 RPS6 40S ribosomal protein S6 0 ; 116.37 0.0035626 13865600.0 1435.62 1709.4699999999998 1598.13 1417.65 2174.55 1454.48 1747.02 1446.58 2193.9 2027.64 2131.96 False True 1677.9175584608543 1796.4747212632753 1824.7688649007114 1764.9743136407278 1854.676575608967 1608.392108194316 2064.4309202068343 1651.637144965452 1696.9851529383923 1569.5947157428614 1602.535492897348 1.047039248676619 1.1210202390059327 1.1386760998357488 1.1013636337312531 1.1573388444930812 1.0036545931886847 1.2882278922099815 1.0306399778886204 1.0589376400458261 0.9794445880915059 1.0 10.64614059461683 -8.456007678303022 24.999869114537876 1.0287228685348908 1.121888692661504 0.3412917100820163 0.0696597696386839 163.29429517382542 61047.713197351855 0.01035316263010431 0.01251636107585112 3.4993898007136647e-09 8.456007678303022 0.09316582412661312 LIEVDDER ddPTM_A549_PD325901_60min_R1 2 LIEVDDER 8 0 P62753;A2A3R7 P62753 RPS6 40S ribosomal protein S6 0 ; 144.38 0.0025426 20619400.0 2224.17 2278.5 2581.5 2656.1000000000004 2918.1 2783.5 2511.0 2094.9 2606.7 2909.0 3265.8999999999996 False True 2449.966101052585 2470.5171913964464 2756.6961138205743 2820.1612645592286 2713.1427228984903 2760.832098866484 2606.5574790719215 2053.1155760827414 2497.149464043431 2725.3252435469553 2864.2150042458466 0.8553708773331652 0.8625459987236322 0.9624613060591161 0.9846192623035234 0.9472552580293693 0.9639053265114141 0.9100425335416582 0.7168161513850217 0.8718442785690719 0.9515086121352607 1.0 11.483924078212866 -10.791408912292567 1.1743369613298236 0.9971121049669311 0.8981444886419595 0.14067334201897697 0.07203564270843857 0.6094989478267372 1.5566879192057292 0.04559249163980907 0.012885915517079571 1.6165572427385208e-11 10.791408912292567 -0.09896761632497164 LIGDAAK ddPTM_A549_MK2206_60min_R1 2 LIGDAAK 7 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25;E9PI65;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;Q53FA3;P34931;P11021 P11142;P54652;A0A0G2JIW1;P11021 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L;HSPA5 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;78 kDa glucose-regulated protein 0 ; 117.6 0.01935 39762000.0 15561.1 17731.1 17170.9 15644.400000000001 21782.9 16809.6 16071.2 14762.6 23184.4 22208.4 24317.4 False True 18187.433247631812 18633.53725434857 19605.991816888247 19477.278702303814 18578.66426563315 18588.38071469059 18991.129011017667 16855.243758566397 17933.17041787906 17191.507015596348 18278.718453902507 0.9950059296278944 1.0194115797199288 1.0726130426666955 1.065571350170089 1.0164095646249534 1.016941136303895 1.0389748635229434 0.9221239334187459 0.9810956092520987 0.9405203684794412 1.0 14.157877304157042 LIGDAAK ddPTM_A549_PD325901_60min_R1 4 LIGDAAK 7 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25;E9PI65;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;Q53FA3;P34931;P11021 P11142;P54652;A0A0G2JIW1;P11021 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L;HSPA5 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;78 kDa glucose-regulated protein 0 ;;; 107.43 0.025613 89182000.0 27945.4 28087.2 28954.699999999997 29445.800000000003 33363.7 32575.6 31620.100000000002 31948.300000000003 32724.2 31003.2 35690.1 False True 30782.39643568385 30454.20691603696 30919.74006075559 31264.60018973614 31020.348810516545 32310.315114005745 32823.42020868263 31311.06609354352 31348.915675470915 29045.65266096079 31300.443958184485 0.9834491956985429 0.9729640562517884 0.9878371087024359 0.9988548479217665 0.9910514001640958 1.0322637965509496 1.0486566980498024 1.0003393605334552 1.0015485952004766 0.9279629611568462 1.0 14.933895499701872 -6.317613451496341 1.6177273719016265 1.0062833033049388 0.9782524576873555 0.06086331369503051 0.028567263038391532 0.3990113239936735 1.9709583533315969 0.002620358002456332 0.009234613607394056 4.812675152345506e-07 6.317613451496341 -0.02803084561758329 LIHGEDS(ph)DS(ph)EGEEEGR ddPTM_A549_MK2206_60min_R1 1 LIHGEDSDSEGEEEGR 16 0 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 2 LIHGEDS(1)DS(1)EGEEEGR 71.98 0.0011224 2863300.0 481.99 465.54 359.09 503.46 451.11 377.66 400.91 485.87 689.87 513.23 679.49 True False 563.3381284758825 489.23399751788867 410.01436159586257 626.8077226011779 384.75231658180337 417.62373052958134 473.7501575369043 554.7435604144702 533.6155464960154 397.2909865462844 510.7538800300281 1.1029541830260063 0.9578664336120672 0.8027630873244803 1.2272206773335268 0.7533027777668241 0.8176613959448111 0.9275507755497652 1.086126962720001 1.0447606319988079 0.7778521164106027 1.0 8.996484448456807 -8.237858105719322 23.591944173022753 1.0266018079486823 0.9356450790989389 0.0 0.14919527106381175 685.8214347866422 686131.4672120485 0.019814587566830157 0.02557023561408446 5.782849559182984e-09 8.237858105719322 -0.09095672884974337 LIHGEDS(ph)DS(ph)EGEEEGR ddPTM_A549_PD325901_60min_R1 2 LIHGEDSDSEGEEEGR 16 0 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 2 LIHGEDS(1)DS(1)EGEEEGR;LIHGEDS(1)DS(1)EGEEEGR 148.57 1.6284e-14 13937900.0 1760.6399999999999 2060.08 1571.35 1254.53 1953.79 1515.2 1622.1999999999998 1791.6399999999999 1553.02 1625.74 1710.52 True False 1939.378876685337 2233.690171451389 1677.9912602951615 1332.0194688556483 1816.5625306095876 1502.8607135629593 1683.9337087019007 1755.904334685611 1487.7519701725275 1523.0904989494766 1500.1368838796664 1.2928012753540858 1.4889909017333145 1.118558765087841 0.8879319501902844 1.210931182434218 1.0018157207602605 1.1225200358695917 1.1704960750944786 0.9917441442576168 1.015301013738458 1.0 10.550878433839399 -5.893530879238149 5.179129678781857 1.026750797211929 1.3868713377176094 0.6295616579521768 0.09821572114565612 0.0821886438755621 3.414954498564203 0.013088822826221723 0.042626393369585354 1.2778183508019745e-06 5.893530879238149 0.36012054050568043 LIHPDEDISLEER ddPTM_A549_PD325901_60min_R1 2 LIHPDEDISLEER 13 0 J3KS31;J3QRS9;X6R4W8;O43670-3;O43670-2;O43670;O43670-4 J3KS31 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 0 ; 97.86 0.00012075 1667200.0 253.8 208.17 333.35 242.21 291.74 284.38 327.22 268.12 319.88 309.9 318.82 False True 279.5655891623148 225.7132164726785 355.9731355963928 257.17076160117864 271.249188848362 282.0641035658885 339.6725361616546 262.77213626392904 306.43655601266454 290.33286111213494 279.6071611664963 0.9998513199590164 0.8072512003305743 1.273118807513028 0.9197574215491656 0.9701081607378523 1.0087871225799154 1.2148205888024142 0.9397904372966234 1.0959538902159671 1.0383598900002844 1.0 8.127257500584959 -7.541729102382627 24.99916055020718 1.05118262382096 0.994464113590267 0.059005202028704296 0.12168311684843541 633.8809792590972 840643.9443442828 0.017591526025955206 0.02609454633584755 2.872571832546199e-08 7.541729102382627 -0.056718510230693076 LIHT(ph)GVK ddPTM_A549_MK2206_60min_R1 2 LIHTGVK 7 0 E7ER26;P57071-3;P57071-2;P57071 E7ER26 PRDM15 PR domain zinc finger protein 15 1 LIHT(1)GVK;LIHT(1)GVK 71.223 0.018408 2434490.0 710.01 622.95 734.41 607.04 1001.48 963.5799999999999 734.6600000000001 678.79 1013.36 990.1700000000001 1249.85 True False 829.8423299221172 654.6554941654181 838.5603812404063 755.7648272510612 854.1636186525336 1065.5453960273621 868.1382124069294 775.0105612071911 783.8355780033955 766.4899092970685 939.4777508948337 0.8833017377279122 0.6968291623105197 0.8925814160491766 0.8044520762000062 0.9091898321583027 1.134189069419102 0.9240646854915352 0.8249376427158697 0.8343311773555125 0.8158680805021751 1.0 9.875715185317052 -6.813708935501025 5.783596313474026 0.9288333717792867 0.8157221873048521 0.19689717303724186 0.09754302373742398 0.23582028082697207 17.04381234973663 0.014758982358255943 0.028505986563578854 1.535645829020961e-07 6.813708935501025 -0.11311118447443458 LIHT(ph)GVK ddPTM_A549_PD325901_60min_R1 2 LIHTGVK 7 0 E7ER26;P57071-3;P57071-2;P57071 E7ER26 PRDM15 PR domain zinc finger protein 15 1 LIHT(1)GVK;LIHT(1)GVK 81.548 0.013680000000000001 4096300.0 1266.9 1110.33 1058.4 1128.93 1201.4099999999999 1180.12 1348.76 1241.54 1188.04 1536.69 1383.9299999999998 True False 1395.514755357514 1203.9014058034743 1130.229388676232 1198.6614421139454 1117.0271062394963 1170.5094939875385 1400.0877998697924 1216.776510730712 1138.1108103203887 1439.6631311468436 1213.715383455082 1.1497874826179628 0.9919141029392984 0.9312145203752872 0.987596810960505 0.920336943460053 0.9644019594243344 1.1535552889542886 1.0025221129412696 0.9377081528624365 1.1861620531236545 1.0 10.245214433587817 -5.266541060876918 4.920093487186722 0.9792576037451358 1.1580110875244642 0.11392597639709912 0.08632527309049524 0.1308052395177763 9.474629505003335 0.008361100346307358 0.0789969492068038 5.413260651607149e-06 5.266541060876918 0.17875348377932843 LIIES(ph)PSNT(ph)SSTEPA ddPTM_A549_PD325901_60min_R1 1 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 2 LIIES(0.607)PS(0.392)NT(0.785)S(0.088)S(0.071)T(0.057)EPA 89.01299999999999 5.4311e-05 4434400.0 1335.2 1155.4 897.29 1144.1 1235.4 1595.2 1240.3 1707.5 1573.0 1749.1 1618.8 True False 1470.7485210777115 1252.7696128766534 958.1854952430991 1214.7684585603756 1148.629765898631 1582.209220086875 1287.500295218203 1673.4425729921638 1506.89228025485 1638.6615274967264 1419.697862418682 1.0359588191335702 0.8824198768196778 0.6749221229442982 0.8556528052319693 0.8090663487664599 1.1144689739768494 0.9068833089772642 1.178731487375199 1.0614175876038994 1.1542325806598066 1.0 10.471368215258336 -7.2536485578495355 24.873709044092088 1.0373204729896255 0.8437252558982512 0.4917908100679267 0.1074048342362647 378.34567371116253 1207940.8391231315 0.01452355670762825 0.024847800872926745 5.576368203086864e-08 7.2536485578495355 -0.19359521709137428 LIIES(ph)PSNTSSTEPA ddPTM_A549_MK2206_60min_R1 2 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 1 LIIES(0.892)PS(0.107)NT(0.001)SSTEPA;LIIES(0.856)PS(0.144)NTSSTEPA 132.59 2.1124000000000003e-09 13075900.0 1451.56 1439.73 1671.29 1572.3600000000001 2496.9 1792.42 1511.8899999999999 1742.48 2224.98 2317.0 2430.6000000000004 True False 1696.5478407652686 1513.0061074159682 1908.3040529993864 1957.5882705859235 2129.6093176234303 1982.0926946878978 1786.580842778854 1989.4818761211966 1721.0255825629529 1793.5880907736123 1827.014938852649 0.9285900211799512 0.8281301237559251 1.0444928568552299 1.0714681248393478 1.1656222794548183 1.0848803983686288 0.9778687654851977 1.0889247995807716 0.9419876903928018 0.9817041189055473 1.0 10.835272715080976 -5.765786083328791 24.99972504575467 1.0107385773455462 0.8783600616983757 0.40151886515850654 0.06891234913808572 92.95699777434127 534649.9684822963 0.01104300562849851 0.0361500076387551 1.7148017445649964e-06 5.765786083328791 -0.1323785156471705 LIIES(ph)PSNTSSTEPA ddPTM_A549_PD325901_60min_R1 1 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 1 LIIES(0.794)PS(0.206)NTSSTEPA 159.66 1.3037e-19 45570000.0 2638.0 2866.6 2995.0 2731.3 2367.3 2869.4 2948.9 3323.6 2623.0 3114.1 3239.8 True False 2905.8078180070397 3108.1784423335744 3198.2587103980677 2900.0061977676364 2201.029014741646 2846.032557746537 3061.1220031999983 3257.308190686238 2512.764431728208 2917.475194544369 2841.325138784313 1.022694579491285 1.0939186085769252 1.1256222199781303 1.0206527081967223 0.7746487667664026 1.0016567688428077 1.0773571674059546 1.1464045934848228 0.8843635659392777 1.026800894667281 1.0 11.472348216250092 -6.522553301436588 24.999786039907594 0.961841967905623 1.0805749988278546 0.12001769299148513 0.09594964794597312 13.507217523088956 1037560.4541324953 0.014360686337235253 0.03015168841586646 3.002248928955545e-07 6.522553301436588 0.11873303092223153 LIIESPS(ph)NTSSTEPA ddPTM_A549_MK2206_60min_R1 2 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 1 LIIES(0.287)PS(0.712)NTSSTEPA;LIIES(0.062)PS(0.938)NTSSTEPA 190.1 1.1567999999999998e-33 58157000.0 2902.6 3743.0 3366.9 2561.8 4701.1 3561.8 3320.2 3202.7 5140.700000000001 4570.9 4554.4 True False 3392.4879182433197 3933.5027123543796 3844.3770476958734 3189.4411150035726 4009.574417509513 3938.7073118685125 3923.4373626350803 3656.692532857394 3976.3396580110284 3538.3305153720785 3423.416784954539 0.9909654977310541 1.148999072985095 1.1229649467723004 0.9316543428251979 1.1712200615277284 1.1505193668438523 1.14605892565523 1.0681412058642905 1.1615119945332137 1.0335669705548476 1.0 11.741221229064529 -5.234384384791312 22.59524524857728 1.0893195052806022 0.9909649967183741 0.13524208421355344 0.07383707775128502 4136.480208807463 3454419.758229281 0.010949231823760485 1.0360687935265303 5.829289379025288e-06 5.234384384791312 -0.09835450856222805 LIIESPS(ph)NTSSTEPA ddPTM_A549_PD325901_60min_R1 1 LIIESPSNTSSTEPA 15 0 P38432 P38432 COIL Coilin 1 LIIES(0.398)PS(0.602)NTSSTEPA 160.38 1.1827e-19 54539000.0 908.2 1202.2 1181.6 890.64 1344.0 1234.9 1190.6 1229.3 1616.1 1590.4 1637.6 True False 1000.3997954184966 1303.5136131212669 1261.7904815380168 945.6528100098006 1249.6020765482913 1224.84338382979 1235.9089345213183 1204.7806471328065 1548.1809371391378 1489.9818725806374 1436.185581601702 0.6965672182161886 0.9076219882861704 0.8785706371810309 0.6584475029718401 0.8700839867468074 0.8528447851870137 0.8605496046987007 0.8388753254222049 1.077981116766632 1.0374577573177828 1.0 10.488026468612324 -8.739054174748718 10.709070461515793 1.0368230074111393 0.8238773021593342 0.6287932453735388 0.074572839565954 0.19859510577527312 92.72674535890144 0.012537887954840975 0.01412331505910277 1.8236682001686458e-09 8.739054174748718 -0.21294570525180512 LIIMDNLGPEQERDT(ph)GQSPQK ddPTM_A549_MK2206_60min_R1 2 LIIMDNLGPEQERDTGQSPQK 21 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LIIMDNLGPEQERDT(0.546)GQS(0.454)PQK;LIIMDNLGPEQERDT(0.701)GQS(0.299)PQK 110.94 1.0983e-10 13777500.0 3459.5 3359.3999999999996 3471.0 2547.26 3862.4 3262.2 3307.9 3141.8 4450.9 5658.5 5433.1 True False 4043.379023345539 3530.3791108424507 3963.239993035838 3171.338814350848 3294.2460764903403 3607.4038387268965 3908.902611848857 3587.1597713589663 3442.778256626781 4380.240920001074 4083.9113240682673 0.9900751271253482 0.864460276117258 0.9704520197778878 0.7765444846122804 0.8066399623018047 0.8833208050985082 0.9571467893565642 0.8783637759758083 0.8430100419509576 1.0725602424779421 1.0 11.995735825286255 -10.89056352041343 1.076182334847032 1.0017486578203898 0.8806803812083598 0.39994610063229186 0.06748494374074475 0.508986342502681 1.0217200083963416 0.0474711646996479 0.010722154240999907 1.2865790627251725e-11 10.89056352041343 -0.12106827661203001 LIIMDNLGPEQERDT(ph)GSPQK ddPTM_A549_PD325901_60min_R1 2 LIIMDNLGPEQERDTGSPQK 20 1 M0R2Q7 M0R2Q7 SIPA1L3 1 LIIMDNLGPEQERDT(0.553)GS(0.447)PQK;LIIMDNLGPEQERDT(0.631)GS(0.369)PQK 91.12799999999999 1.4308000000000001e-06 9123800.0 3615.5 4210.6 4666.3 4392.4 4266.3 4817.5 4047.8 4822.6 4009.6 4667.0 4251.4 True False 3982.5428984095743 4565.442039101985 4982.983178741406 4663.70857213582 3966.649805935994 4778.267877237034 4201.841244041153 4726.409459743491 3841.0904557595964 4372.324823524798 3728.504751845063 1.0681340546605982 1.2244699532279693 1.3364561695343316 1.2508254333933646 1.063871463211381 1.2815507006857083 1.1269507547125581 1.2676420641289547 1.0301959395006324 1.1726751377643112 1.0 11.864381464850297 -8.818462436314077 7.49047077976957 1.0137394746912314 1.204687715487919 0.23666568740087213 0.0953183971168082 0.12527933051750453 13.924495847150608 0.01379516699153981 0.014682828055089133 1.5189293139893778e-09 8.818462436314077 0.1909482407966876 LIIMDNLGPEQERDTGQS(ph)PQK ddPTM_A549_MK2206_60min_R1 2 LIIMDNLGPEQERDTGQSPQK 21 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LIIMDNLGPEQERDT(0.131)GQS(0.869)PQK;LIIMDNLGPEQERDT(0.276)GQS(0.724)PQK 120.85 2.2193e-15 15243500.0 3286.8 4082.3 3560.6 3619.6000000000004 5731.4 3026.0 2834.5 3518.2999999999997 6133.0 6244.200000000001 6274.9 True False 3841.531485455158 4290.0716330869 4065.546620340942 4506.402162490021 4888.318652339668 3346.209311503767 3349.4919596377104 4017.02979934186 4743.885292388517 4833.630883214758 4716.669151570184 0.8144585430963094 0.9095553440840197 0.8619528929620848 0.9554204498294807 1.0363921011318638 0.7094432965241606 0.7101392639597502 0.8516666465793105 1.0057702034939788 1.0247975272138046 1.0 12.203552691947014 -8.762147281365616 24.99231507124707 1.0027248272295022 0.8576662897009313 0.3635006243604414 0.0906294806805716 16.255403788189277 573890.3168797516 0.01638071449719039 0.01795155712210897 1.7292298297255716e-09 8.762147281365616 -0.1450585375285709 LIIMDNLGPEQERDTGQS(ph)PQK ddPTM_A549_PD325901_60min_R1 6 LIIMDNLGPEQERDTGQSPQK 21 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LIIMDNLGPEQERDT(0.015)GQS(0.985)PQK;LIIMDNLGPEQERDT(0.067)GQS(0.933)PQK;LIIMDNLGPEQERDT(0.154)GQS(0.846)PQK;LIIMDNLGPEQERDT(0.404)GQS(0.596)PQK;LIIMDNLGPEQERDT(0.269)GQS(0.731)PQK;LIIMDNLGPEQERDT(0.195)GQS(0.805)PQK 182.53 7.2925e-45 82016100.0 20601.2 21839.9 21152.7 21970.0 25543.1 24628.100000000002 24197.4 24831.100000000002 24634.3 23626.5 26852.3 True False 22692.61865819813 23680.425020135724 22588.249423518286 23327.037002509805 23749.040774911202 24427.53691902052 25118.24529832534 24335.82423087889 23599.006039085853 22134.71875787628 23549.637330754384 0.9636079885002289 1.0055537029103434 0.9591761056132876 0.9905476111959535 1.008467367941009 1.037278688242033 1.0666085827794236 1.0333842466056917 1.002096368094255 0.9399176066703028 1.0 14.523417221759017 -6.6590470701688265 3.634654611192031 1.0118146229091924 0.978559089506317 0.20844109315514692 0.03143725401355944 0.2594881817524142 6.6026988374495765 0.0038004253063035993 0.00823760728212757 2.192567285300549e-07 6.6590470701688265 -0.03325553340287546 LIINSLYK ddPTM_A549_PD325901_60min_R1 2 LIINSLYK 8 0 P14625;Q96GW1;A0A1W2PRR1;F8W026 P14625 HSP90B1 Endoplasmin 0 ; 136.75 0.0030085 8999000.0 6837.9 7210.7 6707.1 6661.200000000001 6780.7 7424.2 7096.6 7210.5 7632.4 7196.3 7028.4 False True 7532.078574204071 7818.370994953846 7162.284139068744 7072.647195317175 6304.447024145094 7363.739776685664 7366.664996408526 7066.680920972177 7311.636770385961 6741.924389871756 6163.951356698457 1.2219561995762425 1.2684024487729786 1.1619631182334662 1.1474209944293647 1.022793117485257 1.194645990949195 1.1951205598666939 1.1464530642820063 1.186193132825472 1.093766644109741 1.0 12.589639761419585 -10.783390849133463 0.6980888127970856 0.9803802745049475 1.1722237211927253 0.3252841886618386 0.06388139074783876 0.6082944241249357 0.43782166280827933 0.07042656469103727 0.012055236264900134 1.646679772966407e-11 10.783390849133463 0.19184344668777786 LIITPET(ph)PEPEAQPVGPPSR ddPTM_A549_MK2206_60min_R1 1 LIITPETPEPEAQPVGPPSR 20 0 Q96DU7 Q96DU7 ITPKC Inositol-trisphosphate 3-kinase C 1 LIIT(0.137)PET(0.863)PEPEAQPVGPPSR 90.714 4.0030000000000005e-06 2033100.0 949.07 1082.6 1090.0 735.41 1702.6 867.17 879.3 1344.2 1845.8 1469.3 1509.3 True False 1109.2498134662676 1137.6997158415309 1244.5783902071637 915.5854830138097 1452.1497954205815 958.9333538191414 1039.0574281564434 1534.7444664398517 1427.7292471369185 1137.3841095268324 1134.4991554391117 0.9777440627859513 1.0028211218907257 1.0970289261479842 0.8070393694206227 1.279991958088785 0.8452481865867789 0.9158732495964466 1.3527947192220022 1.2584665579449559 1.0025429318954442 1.0 10.147839819680042 -8.212435895754627 24.992869512682176 1.1427698757106786 0.9926680886746129 0.21152304224657237 0.15177830775221512 519.2312466614499 264819.74663113395 0.025213925743716236 0.032551012478653635 6.1314628922292874e-09 8.212435895754627 -0.1501017870360657 LIITPET(ph)PEPEAQPVGPPSR ddPTM_A549_PD325901_60min_R1 2 LIITPETPEPEAQPVGPPSR 20 0 Q96DU7 Q96DU7 ITPKC Inositol-trisphosphate 3-kinase C 1 LIITPET(1)PEPEAQPVGPPSR;LIIT(0.033)PET(0.967)PEPEAQPVGPPSR 192.16 2.5548e-44 9362900.0 2634.8 3114.0 3027.0 2534.5 3276.6 3173.5 3319.6 3565.7 3243.1 3701.6 3561.2 True False 2902.282956362756 3376.427708583952 3232.4304228297024 2691.050308732866 3046.462919656349 3147.656068170573 3445.9291945548207 3494.579316262464 3106.803785184046 3467.8803442809904 3123.1949763067787 0.9292672978728808 1.081081307506656 1.034975545027322 0.8616337850014956 0.9754315509494171 1.0078320732613113 1.1033346367090022 1.1189116730697526 0.9947517874333559 1.1103630642944382 1.0 11.608806922086664 -7.336327683713769 5.633442224256372 1.0172107718335046 0.9792341650636448 0.12594795530550895 0.07205048214950263 0.558694415980451 31.76292599605231 0.010678066726107122 0.017218499624684754 4.6096963267361414e-08 7.336327683713769 -0.03797660676985981 LILDSAR ddPTM_A549_MK2206_60min_R1 2 LILDSAR 7 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 190.71 7.856800000000001e-09 16220600.0 4292.6 4113.2 3828.9 4374.799999999999 5613.5 4219.0 4023.4 4473.5 5701.1 6065.8 5417.2 False True 5017.085936006086 4322.544311102329 4371.895594737807 5446.626196392234 4787.761586158487 4665.451779654458 4754.399700266841 5107.632324519175 4409.809952785939 4695.53156711894 4071.9597328859445 1.2321059797048377 1.0615390609569673 1.0736588477114648 1.3375933343358517 1.1757880480721818 1.145750961625518 1.1675949695350318 1.2543425425524068 1.0829699314488426 1.1531380158789164 1.0 11.991507579510618 -9.13121778454491 2.0006405451212768 1.028375112903665 1.1764449409741768 0.15895728311944668 0.08493925222934826 0.21015475661504243 1.7340598814270978 0.015596616805143196 0.014815016233791754 7.39234480068045e-10 9.13121778454491 0.14806982807051194 LILDSAR ddPTM_A549_PD325901_60min_R1 2 LILDSAR 7 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 170.55 7.802300000000001e-05 30955000.0 9177.2 8619.9 9031.0 8989.599999999999 10989.1 10521.0 10156.0 10854.6 10953.900000000001 9956.4 10702.900000000001 False True 10108.86258810244 9346.329224541678 9643.897967814675 9544.867175137093 10217.263526336925 10435.320464226439 10542.492137576444 10638.096487731027 10493.545676213354 9327.751204830149 9386.511151273116 1.0769563286281665 0.9957191840414541 1.0274209248136512 1.0168705945491259 1.0885049153700874 1.111735797896652 1.1231534238519003 1.1333387151293326 1.1179388706942608 0.993739958809403 1.0 13.196373310479748 -6.758212065800917 24.99077268812347 1.0742562729315834 1.0267172243133307 0.20673188039940393 0.04765095160595187 135.4694713717139 1048989.4997832759 0.008154116732132415 0.016439834424490565 1.7449698768454385e-07 6.758212065800917 -0.047539048618252755 LILIESR ddPTM_A549_MK2206_60min_R1 2 LILIESR 7 0 P62277 P62277 RPS13 40S ribosomal protein S13 0 ; 107.67 0.025421 5637600.0 3131.5 2951.7 2771.0 3161.5 3915.0 3344.6000000000004 3107.3 3468.0 4632.6 3935.9 3872.9 False True 3660.0206421756207 3101.928922269948 3163.969467214724 3936.0676419251267 3339.108686169139 3698.5233520342003 3671.856188457317 3959.599620304569 3583.323496742056 3046.7774563987314 2911.1520433976916 1.257241321516104 1.065533120918547 1.086844458842473 1.3520652934812796 1.1470059400511308 1.2704672572572144 1.2613069100203316 1.3601486838465513 1.230895344291208 1.046588227265089 1.0 11.507374475042585 -10.542471967844554 0.9337474265115931 1.0050665510357633 1.222795299590043 0.4172490366638065 0.09137553140119621 0.40271281347826027 0.6491067454317695 0.055461516178121666 0.017106323355446425 2.8676624669631035e-11 10.542471967844554 0.21772874855427982 LILIESR ddPTM_A549_PD325901_60min_R1 2 LILIESR 7 0 P62277 P62277 RPS13 40S ribosomal protein S13 0 ; 120.52 0.018337 13109800.0 4583.200000000001 5541.6 5026.6 5386.0 6042.9 6269.7 5801.6 6272.7 6340.700000000001 6185.4 5911.1 False True 5048.483090026489 6008.610080246888 5367.735303401316 5718.6809875065 5618.467550873267 6218.641641912407 6022.383062757332 6147.586077662041 6074.2224293782065 5794.852788393032 5184.072173550207 0.9738450625329812 1.1590521657672088 1.0354283512463778 1.1031252644752778 1.0837942379620795 1.1995669492490295 1.1617089541083732 1.1858604340093497 1.171708692708728 1.117818694338228 1.0 12.339870088474544 -5.244018093962147 22.605453846931542 1.1038413997171848 0.9738446564949693 0.2796423041087618 0.06248964259912671 1216.7734071218315 1578759.0065952367 0.01086710055952455 0.38115432899234053 5.701405180856452e-06 5.244018093962147 -0.12999674322221544 LILS(ph)PKEK ddPTM_A549_MK2206_60min_R1 2 LILSPKEK 8 1 Q9UGU5;B0QXZ8;B0QXZ9 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 LILS(1)PKEK;LILS(1)PKEK 72.006 0.0016337 51354000.0 7194.6 8673.5 7255.1 7692.5 5317.1 4979.4 4979.9 4180.0 6862.4 10574.5 9699.8 True False 8408.872588918002 9114.944102486157 8283.9822741211 9577.162845329443 4534.961633519779 5506.316802941788 5884.683369130301 4772.527800713122 5308.077357000971 8185.713105690793 7291.071959138868 1.1533108761021138 1.250151439125654 1.136181664444785 1.3135466086471845 0.6219883247531949 0.7552136138280724 0.8071081182725465 0.654571485161531 0.7280242722536365 1.1227036506518842 1.0 12.831915224926428 -6.752369581876025 24.999940306046618 0.8238072032413623 1.2104218183890225 0.6443164119430937 0.14298746214218339 97.25282915724627 268065.09271087375 0.020260947017337452 0.041705671787780674 1.7686032474791513e-07 6.752369581876025 0.38661461514766027 LIMGIGHR ddPTM_A549_MK2206_60min_R1 2 LIMGIGHR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 ; 72.138 0.0066528 1781900.0 130.6 372.31 273.54 147.97 228.981 148.83 107.42 0.0 272.722 408.96000000000004 250.85 False True 152.64208713655938 391.25898873541496 312.33208519015386 184.2226566426257 195.29819822929656 164.57909181464166 126.93682353299808 0.0 210.95090244754294 316.5756519649447 188.5570218922024 0.8095274607371795 2.0750168029228675 1.6564330622951466 0.9770129735499606 1.0357513937664335 0.8728345948777825 0.6732012537065183 0.0 1.11876450068321 1.6789385448924317 1.0 7.55885706743768 -6.2801974527543 9.696558087593173 0.9355210527587117 1.5698662400840062 0.24085764037518353 0.46621172717150877 0.3373471894829763 170.0795651489112 0.05786896599040327 0.1372921403085791 5.245689098425754e-07 6.2801974527543 0.6343451873252945 LIMGIGHR ddPTM_A549_PD325901_60min_R1 2 LIMGIGHR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 ; 64.757 0.01064 2250850.0 347.94 370.47 341.05 353.94 343.55 628.54 430.24 415.39 505.17 382.97 499.4 False True 383.26261266011 401.69080706457817 364.19570390025433 375.802069943938 319.420233183159 623.4213786317727 446.6130186363614 407.104720582849 483.93946167599665 358.78920884193116 437.9769659574316 0.8750748154581274 0.9171505313903192 0.8315407708807492 0.8580407171012355 0.7293082924689799 1.4234113368700878 1.0197180522040723 0.9295117146010294 1.1049427236843141 0.8191965256839626 1.0 8.774711187517125 LINGVRS(ph)PQTR ddPTM_A549_MK2206_60min_R1 2 LINGVRSPQTR 11 1 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 LINGVRS(0.992)PQT(0.008)R;LINGVRS(1)PQTR 90.689 8.318299999999999e-05 48465000.0 3022.3999999999996 3613.6 3516.2 2901.4 4178.3 4065.6000000000004 3617.7 3734.5 5752.799999999999 5321.200000000001 5452.3 True False 3532.507229414527 3797.516805066466 4014.8500327031434 3612.2431302487935 3563.677604960541 4495.819093473137 4274.989261732701 4263.876811426591 4449.799985333874 4119.137224266099 4098.3434341752245 0.8619353858824255 0.9265979940577385 0.9796275244344221 0.8813910274397839 0.869540989474865 1.0969844684033667 1.0431017630402724 1.0403903137719057 1.0857557588336613 1.0050737061021973 1.0 12.00082516945563 -7.258059423431435 24.99968841932267 1.045177612292366 0.9080497372809915 0.7536504183830025 0.04022060993020148 130.74133018151178 967020.7149850838 0.006617301105573537 0.011173146734478256 5.5200190506854734e-08 7.258059423431435 -0.13712787501137447 LINGVRS(ph)PQTR ddPTM_A549_PD325901_60min_R1 2 LINGVRSPQTR 11 1 Q92615;H0Y4V9 Q92615 LARP4B La-related protein 4B 1 LINGVRS(1)PQTR;LINGVRS(1)PQTR 106.13 4.5366000000000006e-05 127435000.0 5090.5 5251.1 5778.5 5392.9 5819.5 6710.700000000001 5841.5 5423.5 5783.299999999999 5382.200000000001 6552.0 True False 5607.283812571962 5693.628625737054 6170.6637589433185 5726.007184835463 5410.758396185108 6656.050284125496 6063.801479091451 5315.32403784656 5540.248012967497 5042.366973468001 5746.145536550041 0.975833935445107 0.99086049761898 1.073878780078403 0.9964953286361298 0.9416326756376766 1.1583504528014021 1.0552815692747195 0.9250242626186346 0.9641677151626473 0.8775216258263125 1.0 12.488378818117283 -8.240860897159699 24.6343233254774 0.9782522875867375 1.0283929777498981 0.2251625761446323 0.0647007662633199 1028.0174444739457 1230632.2888311164 0.009254280430324585 0.011939877481624308 5.743003789386513e-09 8.240860897159699 0.050140690163160584 LIPDSIGK ddPTM_A549_PD325901_60min_R1 1 LIPDSIGK 8 0 D6RAT0;P61247;H0Y9Y4;D6RG13;D6R9B6;D6RB09 D6RAT0 RPS3A 40S ribosomal protein S3a 0 109.86 0.0045407 3378000.0 2686.9 2555.3 2356.8 2445.0 2991.9 2463.8 2557.8 2801.4 2869.9 2913.9 2930.9 False True 2959.672110008765 2770.6440988261297 2516.746620589706 2596.022097002115 2781.75926549467 2443.7356296702856 2655.138478681866 2745.5238793442145 2749.288083346084 2729.9158567107133 2570.41788050588 1.1514361662572454 1.0778963684616307 0.9791196364127333 1.0099611104834036 1.0822206329140522 0.950715309056805 1.0329598540449432 1.068123553048064 1.0695879857500061 1.0620513798221178 1.0 11.32778720638682 -2.0000000000000946 0.004867131714815175 5.753414921099862e-12 2.156495033918432 0.04376830171477808 0.052612796826137044 94555.56666125651 34.59058828567217 7114.013897555976 8252.128765184003 0.009999999999997821 2.0000000000000946 2.1564950339126785 LIPDSIGKDIEK ddPTM_A549_MK2206_60min_R1 2 LIPDSIGKDIEK 12 1 D6RAT0;P61247;H0Y9Y4;D6RG13;D6R9B6;D6RB09 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 96.059 0.00026022 7811400.0 3703.6 5366.9 5309.8 4746.3 6254.5 4995.5 4828.4 4577.799999999999 7068.9 7145.6 6610.2 False True 4328.677135673519 5640.05228611667 6062.8094828642215 5909.143713069503 5334.471335286049 5524.120494255471 5705.657780178064 5226.71716892453 5467.80543671371 5531.40399716527 4968.704907760955 0.8711882102139465 1.1351151639750414 1.220199145534747 1.1892724206341199 1.0736140371213792 1.1117827677041103 1.148318905247525 1.0519274672079173 1.100448816787887 1.1132486432280164 1.0 12.278654147187732 -10.536879922294771 0.5283408399500106 0.984971603395475 1.1113896911967434 0.0 0.092479926387379 1.7519743740277207 0.7343500825290844 0.10890527750411047 0.020402787753900153 2.904825696184516e-11 10.536879922294771 0.1264180878012684 LIPDSIGKDIEK ddPTM_A549_PD325901_60min_R1 2 LIPDSIGKDIEK 12 1 D6RAT0;P61247;H0Y9Y4;D6RG13;D6R9B6;D6RB09 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 109.0 0.00010657 19787300.0 7487.3 7696.4 8247.7 8709.400000000001 10238.8 9874.3 8979.2 10136.5 8908.7 8887.2 9385.1 False True 8247.40518414106 8345.002638518145 8807.438519449137 9247.359857517473 9519.662009942449 9793.886974613735 9320.908369606776 9934.319555569582 8534.298319838761 8326.060675300962 8230.792197050641 1.0020183946687868 1.013875996226515 1.0700596380753151 1.1235078758070336 1.1565912225743777 1.1899081813926977 1.13244365140779 1.2069700361441964 1.036874472775157 1.0115746426309313 1.0 13.006815578462543 -8.968769717687765 18.15601633792064 1.0162665993189417 1.1130119275425503 0.33035661139565264 0.06135373254526227 8.404589049550207 4886.294276237124 0.01174699491515919 0.012355180103907012 1.0745590404561334e-09 8.968769717687765 0.0967453282236086 LIPGPLS(ph)PVAR ddPTM_A549_MK2206_60min_R1 2 LIPGPLSPVAR 11 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 LIPGPLS(1)PVAR;LIPGPLS(1)PVAR 175.97 2.1523000000000003e-15 281840000.0 14525.7 14243.7 13708.9 11797.6 16764.1 12772.0 12256.1 13185.2 18237.5 17433.300000000003 17804.7 True False 16977.283040731403 14968.64349023833 15653.028159184396 14688.012529614394 14298.123097268977 14123.52456263255 14482.874724471949 15054.242477981501 14106.735369303045 13495.105422047325 13383.301605278435 1.2685422133829432 1.1184567105873657 1.169593917917143 1.0974879714151682 1.068355441651986 1.0553094430048686 1.0821600791511594 1.1248526650586756 1.0540549548505493 1.0083539787166416 1.0 13.708146446349584 -2.0000000000000004 0.19815637778064374 1.0063890736093126 2.011385562836038 0.7457259032882969 0.03654867152549432 17.750810703438383 0.19635351880789667 0.029980165122743072 5.5935725125554 0.00999999999999999 2.0000000000000004 1.0049964892267254 LIPGPLS(ph)PVAR ddPTM_A549_PD325901_60min_R1 2 LIPGPLSPVAR 11 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 LIPGPLS(1)PVAR;LIPGPLS(1)PVAR 135.8 4.4082e-08 371450000.0 3154.4 3121.2 3192.8999999999996 3540.0 3599.7 3986.6000000000004 3351.2 3945.5 3988.1 4016.8 4507.9 True False 3474.6323658534543 3384.234477852352 3409.5893944674435 3758.6577600766814 3346.869490290839 3954.134451353018 3478.731749847003 3866.803907315127 3820.4940259913333 3763.1785624886256 3953.456877932527 0.8788845997658952 0.8560190694737383 0.8624324230015377 0.9507268894361341 0.8465678502711014 1.0001713875834268 0.8799215110362395 0.9780817210626274 0.9663679518844969 0.951870395626167 1.0 11.948898973297949 -7.081752882039552 0.28541930524419323 1.0031558757162946 0.82466208622387 0.45627748321620165 0.042283400137275454 1.4372492706422042 0.19771278441949797 0.021964901927633413 0.08558230723513854 8.284134052500352e-08 7.081752882039552 -0.17849378949242456 LIPGS(ph)NLDSEPR ddPTM_A549_PD325901_60min_R1 2 LIPGSNLDSEPR 12 0 A0A3B3IRW9;Q6P4E1-5;Q6P4E1;H0YM51;Q6P4E1-2 A0A3B3IRW9 CASC4 Protein CASC4 1 LIPGS(1)NLDSEPR;LIPGS(0.991)NLDS(0.009)EPR 121.24 1.3304000000000002e-05 17727300.0 6479.700000000001 6458.700000000001 6389.5 6528.799999999999 7523.900000000001 7672.5 7072.7 7877.1 8100.7 8019.900000000001 7269.099999999999 True False 7137.514373896979 7002.997315809624 6823.129893184798 6932.069148019389 6995.447220045906 7610.017703809267 7341.85546882994 7719.985061034594 7760.255749943073 7513.5221453153 6375.046782621472 1.1196018817232858 1.0985013215746056 1.0702870309571393 1.0873754161171607 1.0973170015184297 1.1937195072127713 1.1516551515894773 1.210969162152575 1.2172860866053115 1.1785830600957061 1.0 12.638220213740775 -4.272792192526838 12.245523038234197 1.1163125524787698 1.115452485058269 0.0 0.0656764018549039 0.0 0.0 0.011310876763984845 0.0 5.335901543081446e-05 4.272792192526838 -0.0008600674205008207 LIPGSNLDS(ph)EPR ddPTM_A549_PD325901_60min_R1 1 LIPGSNLDSEPR 12 0 A0A3B3IRW9;Q6P4E1-5;Q6P4E1;H0YM51;Q6P4E1-2 A0A3B3IRW9 CASC4 Protein CASC4 1 LIPGS(0.026)NLDS(0.974)EPR 99.941 0.00024712 7114500.0 1027.2 1412.5 1244.6 1251.5 1172.1 1248.7 1104.7 1604.0 1180.9 1504.8 1617.4 True False 1131.480587815327 1531.5363321691818 1329.0660403877914 1328.8023126372784 1089.775739525486 1238.531001205166 1146.7399630150358 1572.0069616863418 1131.2708796903692 1409.7866711892248 1418.470053543352 0.7976767539003573 1.0797100216133497 0.9369715187626073 0.9367855946749932 0.7682754646833859 0.8731456812297894 0.8084343833346839 1.1082412052051809 0.7975289128342495 0.993878346368726 1.0 10.47011997770612 -6.541704794280419 24.982349280272793 0.8986054327410479 0.9497119140582665 0.010624594239152851 0.11259857885073121 701.2457636612573 930558.1232346729 0.0163011814049975 0.033937552624106464 2.8727326191249004e-07 6.541704794280419 0.05110648131721862 LIPHKGT(ph)MPK ddPTM_A549_MK2206_60min_R1 2 LIPHKGTMPK 10 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 LIPHKGT(1)MPK;LIPHKGT(1)MPK 60.628 0.0074042000000000005 20467500.0 5393.8 6391.7 5975.4 5199.6 7258.5 5772.7 4805.3 5451.299999999999 8147.900000000001 7235.4 7254.5 True False 6304.14157425095 6717.0102288419685 6822.801571416406 6473.502233418911 6190.784265276807 6383.563282391869 5678.360809189307 6224.038468906086 6302.413659522648 5600.918114796458 5453.007435985578 1.156085270056401 1.231799205795129 1.2511997556414942 1.1871434817232902 1.1352972351408288 1.1706500233734052 1.0413264379059108 1.1413955586842421 1.1557683963406422 1.0271246061090593 1.0 12.412836407449587 -14.999999999932651 0.12093520460603527 0.4458510282874532 1.2513819002427857 0.6656806960546231 0.04492337485469988 36.385401564589586 0.3059863778970436 4.94264167077621 0.17805966532419373 1.0000000001550763e-15 14.999999999932651 0.8055308719553325 LIPHKGT(ph)MPK ddPTM_A549_PD325901_60min_R1 2 LIPHKGTMPK 10 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 LIPHKGT(1)MPK;LIPHKGT(1)MPK 53.448 0.019791999999999997 30301000.0 11104.0 11232.5 10503.7 11533.1 13380.5 12332.8 11729.5 13438.4 12771.6 13380.5 14175.9 True False 12231.269905667239 12179.102195462174 11216.544245879195 12245.473393429487 12440.699840219062 12232.365765726801 12175.872541128676 13170.360569779135 12234.854066435368 12535.652946469585 12432.354168434025 0.9838257292189002 0.9796296043741367 0.9022059775579919 0.9849681908613067 1.0006712865216008 0.9839138750394516 0.9793698261945786 1.059361758147055 0.9841140222259663 1.0083088670605795 1.0 13.60181188797056 -6.505760888443795 24.735031479338865 0.9961534756658559 0.9553156404345396 0.3285402922763109 0.02857100298392178 601.8584849031267 869675.3471738119 0.0038397611490889965 0.008729619806571616 3.1206072386114254e-07 6.505760888443795 -0.04083783523131623 LIPITGGNARS(ph)PEDQLGK ddPTM_A549_MK2206_60min_R1 2 LIPITGGNARSPEDQLGK 18 1 Q9UK61-2;Q9UK61-3;Q9UK61 Q9UK61-2 FAM208A Protein FAM208A 1 LIPIT(0.005)GGNARS(0.995)PEDQLGK;LIPIT(0.007)GGNARS(0.993)PEDQLGK 117.38 1.2643999999999998e-10 36758000.0 9312.3 10518.5 10323.7 9544.8 13088.7 9153.9 9927.2 9440.7 13969.8 13721.900000000001 15129.5 True False 10883.988576123913 11053.846721853999 11787.755896313476 11883.276428482353 11163.369568496044 10122.559622132958 11730.843740241844 10778.948135931185 10805.66260518654 10622.113259726555 11372.427597042353 0.9570505930461611 0.9719865549839853 1.0365206369288416 1.0449199458146348 0.9816171150123937 0.8900966425818837 1.0315162387398011 0.947814179862045 0.950163235859755 0.9340233797126188 1.0 13.47325262923987 -6.986485613517086 24.93870906885499 0.971245270696351 1.004154843070163 0.15975514944934555 0.041980957385200246 390.8595838837969 721266.8832916779 0.005995246631230631 0.011325701445071808 1.0316072519996296e-07 6.986485613517086 0.03290957237381198 LIPITGGNARS(ph)PEDQLGK ddPTM_A549_PD325901_60min_R1 2 LIPITGGNARSPEDQLGK 18 1 Q9UK61-2;Q9UK61-3;Q9UK61 Q9UK61-2 FAM208A Protein FAM208A 1 LIPIT(0.004)GGNARS(0.996)PEDQLGK;LIPIT(0.046)GGNARS(0.954)PEDQLGK 169.19 9.0788e-31 93391000.0 20737.5 21144.0 21632.3 21658.9 25914.0 24599.0 23471.7 25373.9 24878.0 24551.0 25716.0 True False 22842.755733859358 22925.879084874465 23100.39796358736 22996.72106206915 24093.890038446738 24398.673899772457 24364.928387707074 24867.79765906054 23832.464175575416 23000.845670100112 22553.095027155206 1.012843501362247 1.0165291751429417 1.0242673094656485 1.0196702951138101 1.0683185615737585 1.0818326207731164 1.0803363511026012 1.102633480199427 1.0567269878870185 1.0198531794596613 1.0 14.461037811873979 -6.583778362026345 21.3160663124064 1.0439490436285317 1.018448862218426 0.21590527238378143 0.029451505020282518 35.99283261723043 12597.213558052312 0.005543547703999059 0.011539826678313683 2.60748391460874e-07 6.583778362026345 -0.025500181410105682 LIPKVT(ph)K ddPTM_A549_MK2206_60min_R1 2 LIPKVTK 7 1 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 LIPKVT(1)K;LIPKVT(1)K 46.461999999999996 0.024493 19437300.0 2651.75 2809.06 2909.81 3462.7 4346.0 3370.3 3360.3 3474.5 4874.5 4842.0 4690.0 True False 3099.3005709369954 2952.0291555346475 3322.464812485052 4311.06165544651 3706.709157111387 3726.942908975922 3970.823013572269 3967.0210152099844 3770.433532976979 3748.1888370849542 3525.343562584929 0.8791485186948585 0.8373734653453454 0.9424513536061949 1.2228770271358913 1.051446218306585 1.0571857303584824 1.1263648331230152 1.125286357140522 1.0695222936547892 1.0632123566239389 1.0 11.783548146963485 -6.01125117767894 16.94436816869713 1.0608018559072503 0.866169356670056 0.6898190429170983 0.06000159458511428 3.802421225614266 5730.4155827712875 0.009210522278877292 0.026123837245778554 9.744259077153433e-07 6.01125117767894 -0.19463249923719428 LIPKVT(ph)K ddPTM_A549_PD325901_60min_R1 1 LIPKVTK 7 1 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 LIPKVT(1)K 55.567 0.015729 23035000.0 4394.3 3867.4 4385.6 4583.6 4772.1 4393.5 4570.4 4884.3 5188.0 5039.4 4715.4 True False 4840.406101087319 4193.3193706414795 4683.233188755183 4866.718561889114 4436.924158851267 4357.720792660281 4744.3290730188455 4786.878804840773 4969.966401755982 4721.2114239706125 4135.435693383405 1.1704706492793129 1.0139969960966113 1.1324642760733143 1.176833330929494 1.0729036763768895 1.0537513132249952 1.1472380239425932 1.1575270805201157 1.2017999481185997 1.1416478876758824 1.0 12.013823618791513 -11.03573092036661 1.3551429759610916 1.0005611199520903 1.130837149973554 0.0 0.06805757220210547 0.351216307510267 1.1575688453001927 0.041170493496184145 0.009409779223245058 9.210200394573197e-12 11.03573092036661 0.1302760300214636 LIPNAT(ph)GTGTFSPGASPGSEAR ddPTM_A549_PD325901_60min_R1 1 LIPNATGTGTFSPGASPGSEAR 22 0 Q16512;Q16512-2;Q16512-3;K7EN76 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LIPNAT(0.264)GT(0.264)GT(0.264)FS(0.208)PGASPGSEAR 59.512 0.0020579 1801300.0 774.52 769.45 492.14 533.11 1012.2 864.83 994.32 1085.2 1246.9 802.03 860.66 True False 853.1487002285118 834.2942518850101 525.5395798782322 566.0389939193444 941.106563900432 857.7871112134729 1032.1593917127816 1063.5548346770697 1194.4971292115526 751.3896889247039 754.8042761732539 1.1302912916098589 1.1053120368034461 0.6962594098468018 0.749914927335969 1.2468219823444868 1.1364364753765397 1.3674530262940177 1.409047177195571 1.5825256519047248 0.9954761951457649 1.0 9.559958785999347 -6.854454437323982 6.872995772939361 1.2874950980704705 0.9186359478978087 0.36576630191874115 0.20387747929240296 0.19812294121214852 12.437099266684694 0.03598153248420071 0.06848192262164171 1.3981235874847747e-07 6.854454437323982 -0.3688591501726618 LIPNATGT(ph)GTFSPGASPGSEAR ddPTM_A549_MK2206_60min_R1 1 LIPNATGTGTFSPGASPGSEAR 22 0 Q16512;Q16512-2;Q16512-3;K7EN76 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LIPNAT(0.063)GT(0.311)GT(0.311)FS(0.311)PGAS(0.003)PGSEAR 67.449 0.00085695 2277700.0 814.67 549.97 391.24 495.66 917.56 499.86 785.34 833.66 853.48 823.37 900.43 True False 952.1663792307872 577.9611238882011 446.7237150317899 617.0967222510232 782.588139484382 552.7548534197858 928.0261123943837 951.8338579766753 660.1681427274983 637.3701451447002 676.8283803962355 1.4068062256392981 0.8539256636222101 0.6600250934664774 0.9117477046245555 1.1562578670625951 0.8166839178584484 1.3711394782989 1.4063149323310635 0.9753848417836974 0.9417012696358341 1.0 9.402646253797702 -6.72400582356882 24.931868350105432 1.0461972503723471 0.9293902411441304 0.04248866823350417 0.23829311752854157 453.20555080332224 301846.18053957174 0.03401834463630478 0.07081354502667166 1.8879660326939545e-07 6.72400582356882 -0.11680700922821674 LIPNATGTGT(ph)FSPGASPGSEAR ddPTM_A549_MK2206_60min_R1 1 LIPNATGTGTFSPGASPGSEAR 22 0 Q16512;Q16512-2;Q16512-3;K7EN76 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LIPNATGT(0.01)GT(0.494)FS(0.494)PGAS(0.001)PGSEAR 95.094 9.903100000000001e-07 2206000.0 756.89 942.93 650.81 603.71 850.01 559.76 715.28 737.64 983.32 948.78 1103.9 True False 884.6345278161601 990.9211094203342 743.1046441566276 751.6189771015721 724.9746550014384 618.9934316613842 845.2371172657128 842.2027289277579 760.5995900393729 734.4499390436725 829.7711639099155 1.0661186677634424 1.194210105773107 0.8955537098386118 0.9058147713399836 0.8737043254013893 0.7459808903754404 1.0186388175782357 1.0149819197852867 0.9166377708950462 0.8851234786021179 1.0 9.696569711521498 -5.764970619259273 24.998578283432504 0.9403770607902782 1.1301644052651811 0.48880694457959095 0.08118707718018282 56.54495720713138 400311.4397537862 0.01152534396591715 0.03802060912012513 1.718024610435485e-06 5.764970619259273 0.18978734447490297 LIPNATGTGTFS(ph)PGASPGSEAR ddPTM_A549_PD325901_60min_R1 1 LIPNATGTGTFSPGASPGSEAR 22 0 Q16512;Q16512-2;Q16512-3;K7EN76 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LIPNATGT(0.012)GT(0.245)FS(0.743)PGASPGSEAR 109.65 2.7248e-10 2509200.0 822.46 697.56 873.62 647.31 1305.4 1113.6 1154.8 1131.2 971.56 971.23 1153.5 True False 905.9555337369492 756.3458292870325 932.9091067038272 687.2928685523264 1213.7132073855214 1104.5312108129028 1198.7465459308064 1108.6373285907666 930.7287118909101 909.9063720488517 1011.6268126389612 0.8955432205020796 0.7476530078458531 0.9221870111075956 0.6793936854633507 1.1997637787193396 1.0918366308733833 1.184969131851813 1.0958955562859596 0.9200316759724687 0.899448651104098 1.0 9.982461465159258 -6.752081096273209 24.999999883897726 1.0125128271566404 0.8145836586774582 0.497906140251825 0.1129887375431623 163.30742004939205 436261.0383858181 0.017090583650239122 0.03520367239980947 1.7697784548365854e-07 6.752081096273209 -0.19792916847918218 LIPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LIPSPK 6 0 Q96HE9 Q96HE9 PRR11 Proline-rich protein 11 1 LIPS(1)PK;LIPS(1)PK 74.127 0.046564 28145000.0 7685.0 7928.3 7453.0 6893.7 10617.1 8209.4 7690.1 7163.1 11371.7 10851.8 11025.9 True False 8982.040119789119 8331.816605492715 8509.94746992109 8582.656809469949 9055.338654387326 9078.113259041318 9087.291627733273 8178.491361073726 8796.028106873388 8400.370843097577 8287.864730640757 1.0837580500779593 1.005303160256642 1.0267961346496497 1.035569122857342 1.0926021295822035 1.0953500755724166 1.0964575223020938 0.9868031907950101 1.0613141493916907 1.013574800761513 1.0 13.016784741110017 -10.899100947788275 0.655352133613537 0.9908777492379702 1.0542082258422836 0.20466897683550012 0.03568499550079862 1.4150322368096906 0.8133025547828133 0.05350475583550039 0.00735436547803289 1.261534268382492e-11 10.899100947788275 0.06333047660431335 LIPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 LIPSPK 6 0 Q96HE9 Q96HE9 PRR11 Proline-rich protein 11 1 LIPS(1)PK 62.659 0.060937 29698000.0 5162.5 4796.9 4896.8 5062.3 5806.3 4962.8 5361.8 5668.7 6184.9 5194.8 6475.0 True False 5686.593199568365 5201.151597722012 5229.126294850505 5374.986773682539 5398.485518647577 4922.384602211094 5565.846233089543 5555.633331490879 5924.970161569114 4866.799441449886 5678.616048406824 1.001404770298527 0.9159188706165884 0.9208451936660822 0.946531113895353 0.9506692251472364 0.8668282131157826 0.9801413206393977 0.9783428363764004 1.0433827733839138 0.8570397082604838 1.0 12.471323653937553 -8.278243564243017 2.244563336072793 1.0197981724257916 0.9341818689654813 0.0 0.05964907584008287 0.16542523213094956 1.6337172220539462 0.005748077862651428 0.007322418463427464 5.2693425937160445e-09 8.278243564243017 -0.08561630346031035 LIRDFQEYVEPGEDFPAS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 LIRDFQEYVEPGEDFPASPQR 21 1 Q9Y6G9;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 LIRDFQEYVEPGEDFPAS(1)PQR;LIRDFQEY(0.001)VEPGEDFPAS(0.999)PQR 42.321000000000005 0.019132 2354100.0 948.3499999999999 1422.08 914.76 789.24 1777.62 1189.58 1264.03 1710.52 1871.18 2050.6 2033.17 True False 1108.4082950685765 1494.4577978052127 1044.4867231430326 982.6038354303297 1516.1344527989743 1315.4605660207042 1493.6878891306608 1952.9914482478007 1447.3607176604507 1587.3680357964486 1528.2777763626443 0.7252662521250737 0.9778705291142005 0.6834403662068216 0.6429484552009661 0.9920542431804698 0.8607470358899986 0.9773667537623241 1.2779034534520224 0.9470534349489926 1.038664606884778 1.0 10.57769107290437 -6.783278699853887 24.78055811301211 0.990138373268477 0.7678491423472673 0.48500146288609935 0.1252899673507838 154.8483513585276 175702.42748125485 0.01797993212208965 0.0339999483187798 1.6471050553599377e-07 6.783278699853887 -0.22228923092120967 LIRDFQEYVEPGEDFPAS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 LIRDFQEYVEPGEDFPASPQR 21 1 Q9Y6G9;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 LIRDFQEYVEPGEDFPAS(1)PQR 55.985 0.0017557000000000002 2270400.0 557.35 802.03 769.23 611.75 628.97 967.85 730.1 678.77 767.61 890.59 772.95 True False 613.9317617006161 869.6198828245299 821.4345735557613 649.5364081149456 584.7933170287048 959.9681504896446 757.8843550260499 665.2313998652357 735.3500211356805 834.3579954109598 677.8820501337534 0.9056616288622493 1.2828483696432802 1.2117662259882578 0.9581849939628658 0.8626770939182101 1.4161285880047016 1.1180180311257852 0.9813379772100153 1.0847757673928498 1.2308306367550697 1.0 9.404890459463097 -10.246532568716388 0.46547924884261127 0.9890545488163209 1.1048666575891586 0.0 0.17190987929084176 3.5708854310775613 1.304251939575982 0.183801847652089 0.044368186301027464 5.668490606479334e-11 10.246532568716388 0.11581210877283765 LIRDFQEYVEPGEDFPAS(ph)PQRR ddPTM_A549_MK2206_60min_R1 5 LIRDFQEYVEPGEDFPASPQRR 22 2 Q9Y6G9;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 LIRDFQEYVEPGEDFPAS(1)PQRR;LIRDFQEYVEPGEDFPAS(1)PQRR;LIRDFQEYVEPGEDFPAS(1)PQRR;LIRDFQEYVEPGEDFPAS(1)PQRR;LIRDFQEY(0.004)VEPGEDFPAS(0.996)PQRR 71.05199999999999 9.2451e-05 18951700.0 2121.0200000000004 2113.66 2098.25 2105.04 2936.73 2373.42 2542.87 1973.52 3812.8900000000003 3992.38 3648.8100000000004 True False 2478.996322039705 2221.236265828199 2395.813401148789 2620.774894498837 2504.7409072627065 2624.5737290513107 3004.876563557575 2253.272503651522 2949.276502934167 3090.498585171669 2742.7097749670584 0.9038493043141902 0.8098692344708173 0.8735205682407882 0.9555421862053611 0.9132358553295308 0.9569272523859487 1.0955867773482033 0.8215497404126856 1.0753148327440478 1.1268048166739728 1.0 11.42138625341478 -6.922905010170813 0.5887535793167886 1.0283201170120961 0.8402264031703109 0.4100702247659378 0.07873442841131899 0.6995690403017844 0.41270997935086706 0.014855624814588818 0.06309306389481331 1.194249284688986e-07 6.922905010170813 -0.1880937138417852 LIRDFQEYVEPGEDFPAS(ph)PQRR ddPTM_A549_PD325901_60min_R1 3 LIRDFQEYVEPGEDFPASPQRR 22 2 Q9Y6G9;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 LIRDFQEYVEPGEDFPAS(1)PQRR;LIRDFQEY(0.013)VEPGEDFPAS(0.987)PQRR;LIRDFQEYVEPGEDFPAS(1)PQRR 173.86 5.849999999999999e-41 48200500.0 2576.8 3013.7200000000003 2972.4700000000003 3040.16 2366.8 4337.799999999999 3343.54 4295.3 3796.7000000000003 3288.23 3903.59 True False 2838.3948390601 3267.6967610512606 3174.1996891141735 3227.943778495684 2200.564133016739 4302.474394993004 3470.780244355289 4209.6268719023365 3637.1379023799022 3080.6105966271575 3423.473176895817 0.8290980219198831 0.9544975503544607 0.9271869604634472 0.9428856636822182 0.6427870233854345 1.2567571506122355 1.0138184425625811 1.229636294600489 1.0624116838204127 0.8998494912761242 1.0 11.741244993539928 -7.267681921881274 24.996096641599163 1.0597395933359506 0.8729964360902689 0.42930286555839314 0.12369956430489833 395.70448612560335 1584460.8294908286 0.01674812721959159 0.027178947529743838 5.3990590587426625e-08 7.267681921881274 -0.1867431572456817 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PK ddPTM_A549_MK2206_60min_R1 3 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.032)GAVY(0.041)DRPGAS(0.928)PK;LIRPEYAWIVQPVS(0.017)GAVYDRPGAS(0.982)PK;LIRPEYAWIVQPVS(0.005)GAVY(0.003)DRPGAS(0.992)PK 112.81 9.1969e-14 100829900.0 4483.76 5610.900000000001 4581.6 3706.1200000000003 7433.3 6573.900000000001 6027.9 5607.299999999999 7902.3 7584.2 7145.0 True False 5240.509070592802 5896.470843908411 5231.339773002884 4614.11956637405 6339.871416832965 7269.545734598355 7123.091403598573 6402.151946636046 6112.441667380038 5870.923952544343 5370.6993080318325 0.9757591646874865 1.097896289797921 0.9740518828115107 0.8591282627708603 1.1804554776231364 1.3535566446117762 1.3262875083969148 1.1920518315113426 1.1381090835301348 1.0931395737915226 1.0 12.390894235543923 -6.780799475738414 24.99642350156927 1.125286806904084 0.9851752996176827 0.3679100533196832 0.11509305560312871 319.6693798151488 412734.35872483527 0.02078958271696224 0.039329131538305875 1.656534649014064e-07 6.780799475738414 -0.14011150728640132 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PK ddPTM_A549_PD325901_60min_R1 4 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.002)GAVYDRPGAS(0.998)PK;LIRPEYAWIVQPVSGAVYDRPGAS(1)PK;LIRPEYAWIVQPVS(0.015)GAVYDRPGAS(0.985)PK;LIRPEYAWIVQPVS(0.037)GAVY(0.009)DRPGAS(0.953)PK 169.98 1.2905999999999998e-48 225629300.0 16035.2 15227.8 15971.6 15440.1 16213.9 18008.1 16774.9 15799.300000000001 20205.699999999997 18553.0 19814.3 True False 17663.081699509665 16511.10014796874 17055.528821032978 16393.799909988687 15075.091598918418 17861.448004166534 17413.27799907751 15484.170567188927 19356.524696214496 17381.56041372521 17377.266713196506 1.0164476376538611 0.9501551895632707 0.9814851266615366 0.9434049773511871 0.8675179962260815 1.0278629141717859 1.002072321641565 0.8910590383831802 1.1138992694124281 1.0002470872203073 1.0 14.084913556671664 -8.764890701115515 24.999574267722853 1.0537857631015912 0.9604171390478858 0.27500302843916014 0.054835157930769984 73.76443257047558 534310.6283498787 0.010235249600950212 0.01110878555717583 1.7183407875394415e-09 8.764890701115515 -0.09336862405370538 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PKR ddPTM_A549_MK2206_60min_R1 4 LIRPEYAWIVQPVSGAVYDRPGASPKR 27 3 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.098)GAVY(0.01)DRPGAS(0.893)PKR;LIRPEYAWIVQPVS(0.004)GAVYDRPGAS(0.996)PKR;LIRPEYAWIVQPVS(0.004)GAVYDRPGAS(0.996)PKR;LIRPEYAWIVQPVS(0.03)GAVY(0.001)DRPGAS(0.969)PKR 81.28 1.0219e-06 112168000.0 4296.889999999999 3772.6099999999997 4010.94 3552.1899999999996 6032.0 4635.54 4149.86 4027.39 6501.7300000000005 5590.860000000001 5302.67 True False 5022.099983125654 3964.619734879842 4579.751604052772 4422.476709463866 5144.70079054208 5126.0697659775815 4903.835845342092 4598.284865864598 5029.098536129328 4327.880842979093 3985.8706927531375 1.2599756415220704 0.9946684276758068 1.148996532270701 1.1095384297098596 1.2907344936944027 1.2860602265139918 1.2303047999670291 1.1536462721244103 1.261731481975299 1.0858056310877764 1.0 11.960679192543585 -10.906491058469499 1.12345516248661 0.9985139908727053 1.194649551855348 0.2885188083122201 0.08775929604265865 0.41638517871731984 0.9216915917360212 0.06440120120268134 0.014845594201923775 1.2402491598930888e-11 10.906491058469499 0.19613556098264262 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PKR ddPTM_A549_PD325901_60min_R1 4 LIRPEYAWIVQPVSGAVYDRPGASPKR 27 3 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.002)GAVYDRPGAS(0.998)PKR;LIRPEYAWIVQPVS(0.004)GAVYDRPGAS(0.996)PKR;LIRPEYAWIVQPVS(0.001)GAVYDRPGAS(0.999)PKR;LIRPEYAWIVQPVS(0.399)GAVY(0.002)DRPGAS(0.599)PKR 98.94 3.2226e-10 198563000.0 7657.8 7774.199999999999 7576.3 7882.3 8364.3 8016.9 7920.8 7980.0 9661.4 8452.5 8660.0 True False 8435.214218625597 8429.359117557271 8090.473277992953 8369.17176899786 7776.820423268507 7951.613024394721 8222.23037842807 7820.832639811108 9255.364956423524 7918.807707487324 7594.874900263032 1.1106455773660553 1.1098746494514793 1.0652543174493574 1.101949917398641 1.023956355489038 1.0469709019327407 1.0826024768549263 1.0297513444941997 1.2186329699917748 1.0426515000547374 1.0 12.890810486090363 LIRPEYAWIVQPVSGAVYDRPGASPK ddPTM_A549_MK2206_60min_R1 2 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 0 ; 121.62 8.872e-18 32466000.0 2672.8 2788.0 2523.7 1899.8 3449.6 2958.1 3157.2 2854.5 4606.7 3818.2999999999997 3523.6 False True 3123.9032963139057 2929.8972914891806 2881.598608592496 2365.251085285264 2942.1684096574895 3271.124178572139 3730.822372541252 3259.1341165396184 3563.2898053882564 2955.7433780754805 2648.5928735872603 1.1794577141193028 1.1062090065661625 1.0879734055501147 0.8930217659620001 1.1108420773150423 1.2350422789372384 1.4086054560315333 1.2305153234537853 1.345352032365068 1.1159674284225551 1.0 11.371010382655353 -7.010353578723492 23.868669689491835 1.1964766283700232 1.0623770268745816 0.2607875464519951 0.12055129922488252 437.8251001888298 1009348.7218148897 0.0229610475034426 0.0415530806716036 9.764419318471659e-08 7.010353578723492 -0.13409960149544164 LIRPEYAWIVQPVSGAVYDRPGASPK ddPTM_A549_PD325901_60min_R1 2 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 0 ; 154.86 6.713499999999999e-41 35646000.0 4909.4 5033.700000000001 5506.5 5216.6 5453.5 5457.200000000001 4947.0 5042.799999999999 6089.799999999999 6137.5 5751.5 False True 5407.798673890736 5457.907564771686 5880.204203274445 5538.81753424181 5070.46497355365 5412.758372528891 5135.260792102273 4942.217397999928 5833.866883849956 5749.977202567697 5044.101961762448 1.072103362478662 1.0820375175097872 1.165758394229576 1.0980780278094349 1.0052265025550735 1.073086629406205 1.018072360755367 0.9798012481637225 1.1565719583137766 1.1399407161386188 1.0 12.300381723342156 -6.5452996995998785 24.728175151612188 1.0596503699480235 1.1087976689789603 0.15190562215979087 0.05717016560139639 369.8896661803697 407951.8915920781 0.009560578481507558 0.019902991418059016 2.849051504589152e-07 6.5452996995998785 0.04914729903093673 LIRPEYAWIVQPVSGAVYDRPGASPKR ddPTM_A549_MK2206_60min_R1 2 LIRPEYAWIVQPVSGAVYDRPGASPKR 27 3 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 0 ; 76.79899999999999 1.7824e-06 16491200.0 763.4300000000001 1048.65 793.4200000000001 738.87 1048.05 1217.7 881.1700000000001 872.64 1172.59 1273.4099999999999 1199.6599999999999 False True 892.2783199285115 1102.0218058537057 905.9388865671269 919.8931831691342 893.8832333434402 1346.556205756158 1041.2671829507715 996.3393923479182 907.0002372414561 985.7457965783454 901.7513130683654 0.9894948939884318 1.2220906029001335 1.004643823012037 1.0201184848171032 0.9912746678481091 1.4932678070345877 1.1547165697022155 1.10489375275507 1.0058208112336764 1.093145950876605 1.0 9.816585808542591 -8.712864088803547 3.9606732277846084 1.0022570342071697 1.1291213451902387 0.0643554160056573 0.14016363039880161 0.3189397048162106 10.334458601352217 0.023851910037133692 0.026553369766206633 1.93702805640726e-09 8.712864088803547 0.12686431098306894 LIRPEYAWIVQPVSGAVYDRPGASPKR ddPTM_A549_PD325901_60min_R1 2 LIRPEYAWIVQPVSGAVYDRPGASPKR 27 3 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 0 ; 61.108999999999995 0.00019019 8700600.0 1130.3600000000001 1267.88 1047.32 895.72 1212.3000000000002 1495.65 1210.08 1273.21 1496.55 1556.87 1428.3 False True 1245.1133150729493 1374.7286972252477 1118.3974332467797 951.0465900722832 1127.1522302079566 1483.469922281178 1256.130256581183 1247.814827736078 1433.655207892813 1458.568962502904 1252.6281547396868 0.9940007418496041 1.0974754894527619 0.8928407277251388 0.7592409498969976 0.8998298704552063 1.1842859484421082 1.002795803230388 0.9961574175182027 1.1445177904297912 1.1644069766306782 1.0 10.290742495866407 -7.233390549982083 24.596853441851767 1.065624819775407 0.9266511235281527 0.369281294069147 0.09851070126288142 595.5467489684024 522252.9317225355 0.015294377129727381 0.02648649570085847 5.84264433682355e-08 7.233390549982083 -0.1389736962472543 LIS(ph)DSVER ddPTM_A549_MK2206_60min_R1 3 LISDSVER 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.762)DS(0.238)VER;LIS(0.687)DS(0.313)VER;LIS(0.98)DS(0.02)VER 128.27 0.0010649000000000001 25891900.0 3607.9799999999996 3580.9799999999996 3334.0 2744.49 5015.41 5142.87 4070.63 5072.27 7103.3 7085.919999999999 6389.679999999999 True False 4216.918817358069 3763.236586397751 3806.811332982281 3416.890173204839 4277.649832873452 5687.085089839185 4810.21077991182 5791.279805675396 5494.413891639221 5485.205750614829 4802.946109803341 0.8779858697041956 0.7835267147213191 0.7925992184697139 0.7114154718976735 0.8906304037312222 1.1840826359119914 1.0015125445804298 1.2057765532398454 1.1439674245822826 1.1420502385856302 1.0 12.229703905947044 -7.064490075683404 4.916021355243685 1.0822477367835788 0.791239302126398 0.8045942156006618 0.0742908758869065 0.08084233035075875 3.87251777280976 0.011872724015098488 0.021146526946964422 8.620052766662094e-08 7.064490075683404 -0.29100843465718074 LIS(ph)DSVER ddPTM_A549_PD325901_60min_R1 2 LISDSVER 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.974)DS(0.026)VER;LIS(0.717)DS(0.283)VER 126.31 0.0010787000000000001 29872000.0 5086.5 5508.1 5493.1 4956.8 5895.4 4200.6 5119.0 5662.6 5469.3 5851.8 6621.6 True False 5602.877735516612 5972.286917678634 5865.894798693703 5262.970278290424 5481.327442025892 4166.391706304494 5313.806346224284 5549.655000776237 5239.444341003082 5482.316349325562 5807.18517778079 0.9648181630153814 1.0284305967251657 1.0101098241429507 0.9062859401190412 0.9438871457032779 0.7174545978395468 0.9150399347614657 0.9556531832341245 0.9022347627298034 0.9440574360021742 1.0 12.50362332366334 -6.252528429478661 23.70496096982466 0.9301289819729719 1.003850647537837 0.21244039942307902 0.07063882038669184 485.349493871017 1291120.607397384 0.010931560019195055 0.028423578162648573 5.590769284736077e-07 6.252528429478661 0.07372166556486515 LIS(ph)PLASPADGVK ddPTM_A549_MK2206_60min_R1 2 LISPLASPADGVK 13 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LIS(0.999)PLAS(0.001)PADGVK;LIS(1)PLASPADGVK 170.18 1.1869999999999999e-21 10749700.0 5834.299999999999 6319.6 5798.6 4865.5 7355.9 5601.700000000001 6165.4 5087.9 7819.1 8229.9 7698.7 True False 6818.98720505994 6641.240646805964 6620.928672894735 6057.547718420591 6273.856854301808 6194.468175892481 7285.573373769747 5809.125406040259 6048.0863345369335 6370.759874086212 5786.900316689247 1.1783488278507555 1.147633496926295 1.144123504909904 1.0467689759491459 1.0841480777210197 1.0704293899841026 1.258976822662449 1.0038405861747637 1.0451340101875324 1.1008933151506224 1.0 12.498575077576772 -2.0000004757385375 0.06149073076427534 0.8382502401308878 1.648301523574105 0.13393375376811734 0.06976015053574997 187.60893698805415 0.8366614863802726 2.152971536436037 13.478020476395637 0.009999989045721355 2.0000004757385375 0.8100512834432172 LIS(ph)PLASPADGVK ddPTM_A549_PD325901_60min_R1 2 LISPLASPADGVK 13 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LIS(0.999)PLAS(0.001)PADGVK;LIS(0.994)PLAS(0.006)PADGVK 160.84 1.3500999999999998e-18 15187500.0 8088.5 8533.900000000001 8887.0 8738.3 9302.0 8743.6 9314.1 10116.9 9856.8 9621.2 9571.599999999999 True False 8909.638565561016 9253.081702724654 9490.125261872334 9278.044944880803 8648.6596101579 8672.395020531345 9668.553172371083 9915.110492945487 9442.552973945323 9013.715790035738 8394.353879371542 1.06138467517503 1.1022982632961624 1.1305367153025991 1.1052720767087103 1.0302948546655026 1.033122399312122 1.1517924203947114 1.1811642248382075 1.124869538458421 1.0737831546733132 1.0 13.0352035686213 -10.756686441773496 1.0679597623216717 1.00144593602482 1.1034407508934292 0.15805591539819275 0.04898709497453363 0.4198916624615255 0.8690369192530107 0.030945771930684565 0.00835940852921909 1.751110524492792e-11 10.756686441773496 0.10199481486860917 LIS(ph)PQNLSVR ddPTM_A549_PD325901_60min_R1 2 LISPQNLSVR 10 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 LIS(0.999)PQNLS(0.001)VR;LIS(0.999)PQNLS(0.001)VR 65.234 0.0056622 5713300.0 2618.7 2721.2 2885.8 2830.3 3578.0 3275.9 2727.6 2587.3999999999996 3470.8999999999996 3470.8 2984.8999999999996 True False 2884.5484962149517 2950.5250740522306 3081.6477417251244 3005.1212029223248 3326.6936234299014 3249.222156521185 2831.4003105999896 2535.7922772239676 3325.0301433798813 3251.6530956695656 2617.7762228400816 1.101907974809796 1.1271112665433038 1.1772006005852473 1.1479671855457547 1.270809015073374 1.241214634074426 1.0816051753759695 0.9686818357884053 1.2701735596683221 1.2421432616351666 1.0 11.354126060326694 -11.085653351208665 1.3999181108938779 0.9996780549977545 1.1671631518566268 0.0 0.11069242340450047 0.42658256025082264 1.4884179170533367 0.06691197629874919 0.014553954709594792 8.210066007611628e-12 11.085653351208665 0.16748509685887225 LIS(ph)PYK ddPTM_A549_MK2206_60min_R1 1 LISPYK 6 0 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 LIS(0.999)PY(0.001)K 68.78699999999999 0.052957000000000004 22314000.0 2803.0 2959.4 3564.8 2917.2 3772.4 3113.2 2485.7 3086.2 4469.1 3671.4 3853.3 True False 3276.0778732295275 3110.0208193805897 4070.34224349587 3631.914130958084 3217.4849572680623 3442.6367576250886 2937.3195145780405 3523.67830109111 3456.8559856862084 2842.0281901019603 2896.4192643301703 1.1310786092244687 1.0737467664577964 1.4053014677891196 1.2539324591869836 1.1108491774280966 1.1885837109363506 1.0141209702447305 1.2165636185636959 1.1934929546484858 0.9812212703809686 1.0 11.500054736112743 -11.712304828770026 0.3866765255069027 0.8482673528612683 1.1881013823266438 0.35211742822537884 0.09718165399506486 4.607318297414461 0.5015412624199473 0.712836974120635 0.02880626666179357 1.9395240590699576e-12 11.712304828770026 0.33983402946537544 LIS(ph)PYK ddPTM_A549_PD325901_60min_R1 1 LISPYK 6 0 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 LIS(0.995)PY(0.005)K 68.78699999999999 0.052957000000000004 43850000.0 4531.4 4981.3 4643.2 5116.1 5649.9 4424.5 5287.7 4952.8 5940.5 5414.7 5972.1 True False 4991.424392159629 5401.09163287387 4958.315473829823 5432.109877493874 5253.070515096871 4388.468338938297 5488.926317040464 4854.012518603566 5690.8414436452185 5072.814917921514 5237.569560261069 0.9530039333569881 1.0312209834602466 0.9466825054601611 1.0371432426805054 1.0029595702085585 0.837882588182667 1.0479911061585723 0.9267681245576843 1.0865424083000734 0.968543684156561 1.0 12.354681784061624 -8.76287734116353 24.999841470273445 1.0408672463722757 0.9751612070022805 0.06192011376874229 0.06363087348221814 45.988605562095 799535.1912190622 0.010376652421667609 0.011341477397393362 1.726325393382364e-09 8.76287734116353 -0.0657060393699952 LIS(ph)PYKK ddPTM_A549_MK2206_60min_R1 1 LISPYKK 7 1 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 LIS(0.797)PY(0.203)KK 40.021 0.050064 40709000.0 5041.3 4562.0 4601.1 3586.0 6109.8 4459.0 4090.0 4472.0 6233.2 5920.4 5259.0 True False 5892.14819204852 4794.186314122543 5253.605166222183 4464.570160981659 5211.05651360312 4930.848420355349 4833.100058182479 5105.919694925618 4821.390152375032 4582.977528103625 3953.0451589838253 1.4905339946997123 1.2127830877993164 1.329002061684689 1.12940024245241 1.318238548770508 1.2473544374137326 1.2226270795815755 1.2916421365239734 1.2196648301418405 1.1593536991825641 1.0 11.94874872104144 -14.930249678028535 0.15222495801959626 6.52165214447422e-15 1.353020933807709 0.36659989088209777 0.09516818980392061 26.15205668606851 0.2660185871281906 7.795923733468943 0.13996508919992115 1.1742222946943118e-15 14.930249678028535 1.3530209338077026 LISDS(ph)VER ddPTM_A549_MK2206_60min_R1 1 LISDSVER 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.051)DS(0.949)VER 67.726 0.0078734 5426700.0 758.2 696.46 620.2 668.49 901.74 778.96 678.57 780.89 1051.7 837.79 1028.5 True False 886.165623789735 731.906839178822 708.1536858775072 832.2700800096565 769.0952405277552 861.3890301682006 801.857385447649 891.5835488753276 813.4916292197951 648.5326571295748 773.0950648440506 1.1462569922995085 0.94672294839505 0.9159981974795771 1.0765429995049092 0.9948262193122365 1.114208419299586 1.0372041187578922 1.1532650891455096 1.0522530361565472 0.8388782785211509 1.0 9.594502018085679 LISDS(ph)VER ddPTM_A549_PD325901_60min_R1 2 LISDSVER 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.114)DS(0.886)VER;LIS(0.004)DS(0.996)VER 95.775 0.0025015000000000003 15119200.0 3120.0 3448.2 3382.2 3162.8 4072.5 3494.7 3315.3 3194.5 3164.3 3804.2999999999997 3313.1 True False 3436.7401031773948 3738.791915458954 3611.7364308208166 3358.1589727600367 3786.461649362289 3466.240321864092 3441.4655557017695 3130.783191463231 3031.3154751496636 3564.0958487540993 2905.6097034712975 1.1827948189571236 1.2867495283321306 1.2430218781641311 1.1557501920330469 1.3031556319620794 1.1929476686848257 1.1844211394222326 1.07749612335164 1.0432631304638702 1.226625807484094 1.0 11.50462521038488 -8.305287298307274 1.241003685798111 1.0161049885018631 1.2346944598474874 0.3399225528795795 0.07528690672981012 0.1059369245334229 0.31713677312565347 0.007275345196250179 0.009344431408204398 4.951225446204621e-09 8.305287298307274 0.21858947134562423 LISDS(ph)VERDR ddPTM_A549_MK2206_60min_R1 2 LISDSVERDR 10 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.002)DS(0.998)VERDR;LIS(0.003)DS(0.997)VERDR 88.021 0.00019868 11046100.0 1310.3400000000001 1603.6100000000001 1640.76 1247.54 2065.69 1998.9 1370.04 1886.44 2306.0 2182.3 2373.8 True False 1531.4933572627822 1685.226899427893 1873.444439923216 1553.1873560041986 1761.8297374029962 2210.422271237568 1618.9585339149937 2153.848646980207 1783.6946819253071 1689.316914326827 1784.3199464529011 0.8583064714976034 0.9444645299056382 1.0499487178000155 0.8704646042274103 0.9873956410706421 1.2388037670215633 0.9073252457516748 1.2070977804523801 0.999649578244733 0.9467567280660997 1.0 10.801158612798698 -3.998969054141916 0.7231612074677409 1.0205397019342135 6.923470721427807e-13 0.1825238020373704 0.10695377711929976 17.886170456591724 1.6312356985546224 0.015640084051726347 22.699824643904293 0.00010023766603548236 3.998969054141916 -1.0205397019335212 LISDS(ph)VERDR ddPTM_A549_PD325901_60min_R1 2 LISDSVERDR 10 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.004)DS(0.996)VERDR;LIS(0.013)DS(0.987)VERDR 63.966 0.0017519000000000002 14155400.0 3486.3 3335.2 3469.3999999999996 3806.1 4050.2 3074.0 3644.3 3555.3999999999996 3343.0 4462.1 4017.8 True False 3840.226609521586 3616.269008885419 3704.8543471970156 4041.194152719733 3765.7279244314645 3048.9663631814524 3782.9858307374775 3484.4847578426557 3202.505335595652 4180.362244493252 3523.636070932654 1.089847683533656 1.0262890196626482 1.0514293396413086 1.146881820757979 1.068705124089257 0.8652898034314981 1.0736028791237164 0.9888889453105083 0.9088638188301882 1.186377412519441 1.0 11.782849211822414 -7.111723537665003 9.992727870146926 0.9626440414829356 1.077249438068223 0.048520557284854604 0.08795445810162086 0.2788163936362564 23.22204013463664 0.008720437943255803 0.015117381176589954 7.731726131873965e-08 7.111723537665003 0.11460539658528734 LISDS(ph)VERDRDR ddPTM_A549_PD325901_60min_R1 2 LISDSVERDRDR 12 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.002)DS(0.998)VERDRDR;LISDS(1)VERDRDR 86.49799999999999 6.2974e-05 11976500.0 2457.12 2676.02 2598.02 2690.82 3032.11 2431.8 2158.4 2604.79 3091.17 2992.8599999999997 3081.32 True False 2706.565013563859 2901.5375968930066 2774.337260363403 2857.025840104387 2819.1450538116383 2411.9962270607193 2240.539093121799 2552.835420031776 2961.258874733239 2803.890308835317 2702.33717409682 1.0015645121961703 1.0737141259446146 1.0266436353526636 1.0572425482246741 1.0432247614525962 0.8925593187189386 0.8291115981375033 0.9446768687867342 1.0958139876542075 1.0375797423474509 1.0 11.399991977478646 -3.9827464620998665 15.330663903030594 1.017618181852293 1.0043144616070043 0.0 0.07921779883283372 0.0 0.0 0.01171599500885863 0.0 0.00010405274407594472 3.9827464620998665 -0.013303720245288586 LISPLAS(ph)PADGVK ddPTM_A549_MK2206_60min_R1 1 LISPLASPADGVK 13 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LISPLAS(1)PADGVK 107.37 8.379999999999999e-05 1445600.0 2012.9 2501.9 2145.8 2422.8 3444.5 2552.4 2453.7 2679.4 3998.8 3632.9 3531.2 True False 2352.6283093199118 2629.236023521083 2450.106706152782 3016.386108763625 2937.818612901558 2822.4932738540037 2899.5055287927503 3059.2131553183585 3093.0781847714306 2812.2253668413728 2654.305583837932 0.8863441811843621 0.990555134092511 0.9230688135802761 1.1364125242889898 1.1068125052329834 1.063364102098932 1.0923781897788412 1.152547458719866 1.1653059857181425 1.059495705379597 1.0 11.374118758952998 -6.254328747528718 24.876521353355027 1.0900920419962339 0.939045940859767 0.6788114251123953 0.04994655754586792 327.5470161193066 1145918.2456572775 0.009330639914903821 0.024116709692158417 5.567641360982506e-07 6.254328747528718 -0.15104610113646688 LISPY(ph)KK ddPTM_A549_PD325901_60min_R1 1 LISPYKK 7 1 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 LIS(0.467)PY(0.533)KK 46.566 0.024197 73616000.0 6934.0 6809.1 6625.9 6923.1 7606.0 7405.6 8001.1 8313.1 8130.4 6925.9 7297.8 True False 7637.934575458992 7382.926753538531 7075.573418773476 7350.724163499115 7071.780799275529 7345.291248918852 8305.586238869917 8147.288698999207 7788.7075622276125 6488.5974920185145 6400.216864565767 1.193386839396918 1.153543217326502 1.105520886010404 1.1485117331251302 1.1049283092933642 1.1476628689858004 1.2977038770128335 1.2729707244930946 1.2169443203321908 1.0138090051201327 1.0 12.643905074795489 -10.744665559878234 1.0432269503788818 1.002009169185115 1.1818742315436561 0.5651125348500774 0.05911044111308931 0.336694024207102 0.6620367246299645 0.043196218981446786 0.011586688429091368 1.8002567174753205e-11 10.744665559878234 0.17986506235854116 LISWYDNEFGYSNR ddPTM_A549_MK2206_60min_R1 1 LISWYDNEFGYSNR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 88.18700000000001 0.00021431 666960.0 953.53 802.88 993.02 841.17 1023.2 1013.9 1189.0 1148.3 1358.6 1148.4 1109.1 False True 1114.4625524297355 843.7431626222498 1133.8451679298328 1047.256687761556 872.6886354248445 1121.1902250276496 1405.025909334712 1311.0750415212624 1050.8792692383886 888.9756424015613 833.6798603972157 1.336799178402532 1.0120709431798427 1.3600486491176602 1.2561856625186785 1.0467910727854726 1.3448690298137302 1.6853302761389393 1.5726360966625565 1.260530953377818 1.0663273573359435 1.0 9.703349673581782 -10.098083441647356 1.0561062755905688 1.0309060080126713 1.3148344353894375 0.25572219386089245 0.1863442309987252 0.48023691643513844 1.073672080817313 0.07402242371143282 0.03767766787223489 7.978413820848855e-11 10.098083441647356 0.28392842737676616 LISWYDNEFGYSNR ddPTM_A549_PD325901_60min_R1 2 LISWYDNEFGYSNR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 225.23 1.5309e-46 30661000.0 29809.0 30832.0 30037.0 32910.0 35326.0 36816.0 30175.0 33671.0 40218.0 36708.0 41423.0 False True 32835.18773577403 33430.32084491342 32075.491447154174 34942.775955967096 32844.823628084036 36516.182702305894 31323.326137393567 32999.40549061148 38527.7773218624 34390.25061537354 36328.2336020318 0.9038476270406274 0.920229736769907 0.8829356196762681 0.9618627852583721 0.9041128723155716 1.0051736371862456 0.862230916056477 0.9083680162408407 1.0605463988127288 0.9466535310280025 1.0 15.148803598439564 -8.754705375830447 24.997946645001658 1.0285913562980047 0.9194276304595448 0.36661219700900216 0.04563580573209378 74.95897623348125 278262.1407104791 0.006734291527482591 0.007552209730138506 1.7591165890626101e-09 8.754705375830447 -0.1091637258384599 LITEDVQGK ddPTM_A549_MK2206_60min_R1 2 LITEDVQGK 9 0 D6RAT0;P61247;D6RG13;D6RB09;D6RED7;D6RAS7;H0Y8L7;E9PFI5;D6RGE0 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 125.82 0.00019176 9577400.0 5870.9 6902.200000000001 6452.9 5850.299999999999 8933.099999999999 6212.5 6461.2 6280.6 10058.0 8950.0 9700.099999999999 False True 6861.764390275857 7253.4924983201645 7368.018251530102 7283.623762629944 7619.052823606012 6869.902626476252 7635.116404872524 7170.894283530818 7779.879059325562 6928.188783955046 7291.297460859283 0.9410896245984723 0.9948150568891119 1.0105222412173782 0.99894755381048 1.0449515829667033 0.9422057820785481 1.0471546999500307 0.9834867281200902 1.0670088692841093 0.9501997170114845 1.0 12.831959844590683 -7.814195036048126 24.99999953534369 1.0291266050407344 0.9930370483413349 0.0 0.0418245444145502 127.28537450900154 60317.77903789889 0.005768065968040895 0.00796973258608143 1.5339279608404803e-08 7.814195036048126 -0.036089556699399505 LITEDVQGK ddPTM_A549_PD325901_60min_R1 2 LITEDVQGK 9 0 D6RAT0;P61247;D6RG13;D6RB09;D6RED7;D6RAS7;H0Y8L7;E9PFI5;D6RGE0 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 115.71 0.00055743 17778400.0 12687.3 12304.400000000001 12617.7 13083.0 13719.900000000001 13314.2 13709.599999999999 14245.7 13500.900000000001 14280.400000000001 14600.9 False True 13975.305356103381 13341.33497029555 13474.012998393897 13891.107196351188 12756.261555085495 13205.773569508943 14231.326330180967 13961.558337964545 12933.50412364444 13378.733106891685 12805.081862730993 1.0913874277351017 1.0418781475443208 1.052239504817991 1.084812057061584 0.9961874271348793 1.0312916161781174 1.1113811284253512 1.0903138681681888 1.0100290074120664 1.0447987174396984 1.0 13.64442885564598 -8.859336613342226 7.380710629683958 1.0044507433499599 1.0604765013702424 0.2329114703063765 0.03314893344506547 0.16888518968316718 11.180526553360277 0.005488254571388849 0.005829903661423842 1.3824944186291273e-09 8.859336613342226 0.056025758020282534 LITLEEEMTK ddPTM_A549_PD325901_60min_R1 1 LITLEEEMTK 10 0 H7BZ94;P07237;H0Y3Z3;I3L398 H7BZ94 P4HB Protein disulfide-isomerase 0 88.26700000000001 0.00042926 2194700.0 3099.2 3150.0 3037.3 4306.6 4097.2 4486.8 3881.6 4119.9 4435.4 4343.1 4758.3 False True 3413.8285024895454 3415.4615549259615 3243.429442768633 4572.6089010017595 3809.4268065726656 4450.260988393798 4029.3164120930205 4037.7253625009735 4248.995562518982 4068.875924801916 4173.059265348913 0.8180637478207758 0.818455080014396 0.7772306206385611 1.0957450182820347 0.9128618992316555 1.066426500420599 0.965554562225017 0.9675696187754419 1.0181967933694611 0.975034301235047 1.0 12.026889694412167 -6.250170222307867 24.994532399607323 1.004721922720616 0.805970326918008 0.7645007045748327 0.048297021027396705 219.6511781904461 487176.3228458335 0.005742697414494828 0.015043710053576227 5.621209579390149e-07 6.250170222307867 -0.19875159580260793 LITPAVVSER ddPTM_A549_MK2206_60min_R1 3 LITPAVVSER 10 0 P62851 P62851 RPS25 40S ribosomal protein S25 0 ;; 80.23899999999999 0.0033329 5868300.0 3414.2999999999997 3580.29 4066.63 3848.6 4679.6 3612.02 3495.4399999999996 3779.46 5614.5 5410.9 5503.5 False True 3990.550368379441 3762.5114683449788 4643.339283457027 4791.507172770217 3991.237039028638 3994.2415589351745 4130.5162022917775 4315.210029110817 4342.824714514157 4188.573931966743 4136.829061127111 0.9646398991628106 0.9095158182146045 1.1224392438859712 1.1582560221777047 0.9648058887744311 0.965532174502495 0.9984739860550066 1.0431202172842753 1.0497955439645168 1.0125083415521967 1.0 12.014309629530445 -8.255979866110366 23.40310546855838 1.0256420100850347 1.0142899377918553 0.009178592091383497 0.06919029799078359 1703.0294059065445 7300310.036971518 0.011899507134849935 0.015111370799011868 5.546514259987349e-09 8.255979866110366 -0.011352072293179472 LITPAVVSER ddPTM_A549_PD325901_60min_R1 2 LITPAVVSER 10 0 P62851 P62851 RPS25 40S ribosomal protein S25 0 ; 105.1 0.00090889 13889300.0 3734.8 3765.9 3736.1 3588.0 4596.1 4322.9 3685.9 4013.1 4079.8 4101.3 4526.9 False True 4113.954146585556 4083.2656094271974 3989.6542129944014 3809.62261106077 4273.285791684229 4287.695735652929 3826.16894150187 3933.0555722839526 3908.3401938866737 3842.343218067761 3970.1199983834504 1.036229168957279 1.0284992924873348 1.0049203083581617 0.9595736684563612 1.0763618715364325 1.0799914706353433 0.9637413839027047 0.990664154707014 0.9844388067559842 0.9678153858402977 1.0 11.954966898694392 -7.788638204731037 24.999652316969442 0.9903131705613676 1.0284583486062433 0.3498346233068347 0.032544547932221134 240.1861178178914 220765.00688207953 0.005134154127633395 0.007094814839153952 1.6269035067570964e-08 7.788638204731037 0.038145178044875716 LITPPPPPPS(ph)PER ddPTM_A549_MK2206_60min_R1 2 LITPPPPPPSPER 13 0 Q96HE9;J3QKY4;J3QR53 Q96HE9 PRR11 Proline-rich protein 11 1 LIT(0.002)PPPPPPS(0.998)PER;LITPPPPPPS(1)PER 173.33 8.3759000000000005e-22 28718000.0 6379.2 7112.0 7068.700000000001 6369.5 8103.5 7397.200000000001 6109.200000000001 7653.9 10459.2 10508.2 9989.2 True False 7455.853003533996 7473.97042219191 8071.147951245301 7930.0277859377165 6911.485884641541 8179.966794136042 7219.162561234329 8738.863764085689 8090.207899910308 8134.390321738147 7508.605952105198 0.9929743351951488 0.9953872223240617 1.0749196325827142 1.0561251764336312 0.9204752425054025 1.0894121820099794 0.9614517804347267 1.1638463677316242 1.0774580463424166 1.0833422839904785 1.0 12.874329366480003 LITPPPPPPS(ph)PER ddPTM_A549_PD325901_60min_R1 2 LITPPPPPPSPER 13 0 Q96HE9;J3QKY4;J3QR53 Q96HE9 PRR11 Proline-rich protein 11 1 LITPPPPPPS(1)PER;LITPPPPPPS(1)PER 209.79 2.478e-37 46007000.0 13059.0 12469.1 13068.599999999999 13373.8 16176.6 15237.3 13406.0 13599.599999999999 13617.5 14823.5 15749.400000000001 True False 14384.740066472306 13519.91481731025 13955.513783875858 14199.869251896478 15040.411422240391 15113.212480710705 13916.17266604469 13328.345309320182 13045.20383113186 13887.541680205662 13812.32364367235 1.041442442094976 0.9788298599203432 1.0103668393456091 1.0280579588360335 1.088912467608638 1.0941831997713372 1.00751857725401 0.9649603971903826 0.9444612049116066 1.0054457192340531 1.0 13.753668423780317 -8.0016491623014 24.909206570922397 0.9730395655117775 1.0388853013608002 0.41410633107900563 0.03406320789209931 47.920757928512906 723821.0862948905 0.006034374933225154 0.008273811161531062 9.962098642337757e-09 8.0016491623014 0.06584573584902265 LITPPPPPPS(ph)PERVGISSIDISQSR ddPTM_A549_MK2206_60min_R1 1 LITPPPPPPSPERVGISSIDISQSR 25 1 Q96HE9;J3QKY4;J3QR53 Q96HE9 PRR11 Proline-rich protein 11 1 LIT(0.014)PPPPPPS(0.953)PERVGIS(0.014)S(0.014)IDIS(0.002)QS(0.002)R 48.088 0.0028853000000000004 3606400.0 253.9 460.49 457.53 646.23 792.8 714.62 622.46 537.98 844.77 783.12 744.59 True False 296.7521127409836 483.9269740881825 522.4146338270491 804.5563790103671 676.1801702158097 790.2406140736358 735.5529247472538 614.2403124946521 653.4309438204864 606.2126480995389 559.6877533614311 0.530210123338806 0.8646374182421598 0.9334037250046598 1.4375093508447854 1.2081382273504044 1.4119312229498078 1.314220152807692 1.097469631603664 1.1674919450998216 1.083126519132648 1.0 9.128478369957763 -5.54373332019619 1.758478433343014 1.1493916229319536 0.5019793357836317 0.6525804379426424 0.14775281961178777 0.3050606479459039 1.3777858728031172 0.024004769868268213 0.2727986343230333 2.85934579410515e-06 5.54373332019619 -0.6474122871483219 LITPPPPPPS(ph)PERVGISSIDISQSR ddPTM_A549_PD325901_60min_R1 1 LITPPPPPPSPERVGISSIDISQSR 25 1 Q96HE9;J3QKY4;J3QR53 Q96HE9 PRR11 Proline-rich protein 11 1 LIT(0.006)PPPPPPS(0.878)PERVGIS(0.03)S(0.027)IDIS(0.03)QS(0.03)R 42.59 0.017725 7726800.0 1149.3 1163.4 1027.6 1513.2 1370.6 1361.2 1410.9 1303.0 1051.5 1227.5 1300.8 True False 1265.9760899300577 1261.4438009526557 1097.339115460787 1606.6669272734557 1274.3337843133102 1350.1148385044212 1464.592571574105 1277.0106428162744 1007.3091116897484 1149.9954405135397 1140.809846450594 1.1097170083768946 1.105744138584875 0.9618948494132852 1.4083564691103294 1.1170431148347375 1.183470534291967 1.2838183121673585 1.119389569426879 0.8829772243146332 1.0080518187071446 1.0 10.15584262366394 -8.649787985095623 5.518372456701138 0.9451170400355969 1.1670697001045947 0.38797314119382353 0.11080577138607278 0.13821527669170539 6.243162636178184 0.01871580050095258 0.021198534465621942 2.23981430954505e-09 8.649787985095623 0.22195266006899772 LITSEEERS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 LITSEEERSPAK 12 1 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LITSEEERS(1)PAK;LITSEEERS(1)PAK 126.77 2.4287e-07 235840000.0 10500.0 10281.0 10878.5 11157.4 11724.8 11028.7 11342.099999999999 11490.3 12048.8 10895.8 13518.6 True False 11565.952270308537 11147.415951172636 11616.780427734695 11846.567257706094 10901.290496364147 10938.885923753833 11773.72982213527 11261.116952534032 11542.430836830656 10207.837328511136 11855.897901466033 0.9755441862297378 0.9402422358743668 0.9798313484378295 0.999212995604594 0.9194824877005862 0.9226535193425707 0.9930694343006613 0.9498324838932315 0.9735602425695133 0.8609923443460906 1.0 13.533317308412204 -9.72032165224496 0.6953321332870175 0.9978470152101501 0.9591946975380771 0.0 0.04802038929725138 0.6413512856294789 0.6582416858309698 0.011055955898631493 0.005727123591868236 1.9040499958975044e-10 9.72032165224496 -0.038652317672073 LITSEEERS(ph)PAKR ddPTM_A549_MK2206_60min_R1 6 LITSEEERSPAKR 13 2 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR 253.79 1.7679999999999997e-69 581020000.0 31338.3 35850.09999999999 31973.699999999997 29289.000000000004 43045.0 34468.3 30807.800000000003 33298.0 47363.1 47668.3 50488.99999999999 True False 36627.43889212587 37674.716961842285 36508.05144492367 36464.80631483319 36713.137521366676 38115.71262779419 36405.178477377565 38018.09347084822 36635.433473328965 36899.99792292787 37951.187874488365 0.9651196956801359 0.9927150919870962 0.9619738798601664 0.9608343864078533 0.9673778233973558 1.004335167422162 0.9592632145738431 1.001762938134667 0.9653303499877041 0.9723015270289569 1.0 15.211857422339419 LITSEEERS(ph)PAKR ddPTM_A549_PD325901_60min_R1 4 LITSEEERSPAKR 13 2 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR 221.13 3.8329999999999995e-40 912400000.0 30087.100000000002 26870.9 27173.199999999997 30193.2 33916.1 30156.5 30947.7 30977.0 32197.1 31180.800000000003 34270.3 True False 33141.52024304763 29135.40504643174 29017.33675772582 32058.165390267586 31533.950140193083 29910.915462355715 32125.431658731253 30359.13943401363 30843.967855431274 29212.0389666514 30055.270357330737 1.1026858134704527 0.9693942094027901 0.9654658371971105 1.0666403931531538 1.0491986851318302 0.9951970189168565 1.0688784787755399 1.0101103424813735 1.026241570570606 0.9719439758600052 1.0 14.875330377197603 -5.240179260803193 24.207389805878314 1.015663968262564 1.1026859484300617 0.34418949485701034 0.03559126992598998 2966.98483658695 3378216.177773928 0.004413497250541307 0.27272980069036623 5.752024658897215e-06 5.240179260803193 0.08702198016749763 LIVENLS(ph)SR ddPTM_A549_MK2206_60min_R1 1 LIVENLSSR 9 0 Q08170;A0A0D9SEM4;Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13243-3;Q13243;B4DJK0;B4DUA4 Q08170;Q13247;Q13243-3 SRSF4;SRSF6;SRSF5 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 1 LIVENLS(0.625)S(0.375)R 57.532 0.013288 34948000.0 719.4 805.17 726.94 691.36 873.68 677.85 668.64 573.68 955.7 920.21 915.32 True False 840.817132358659 846.1497138408691 830.0310229148586 860.7432310363301 745.1628293568979 749.5796370795857 790.1232329836511 655.0008968213165 739.235475939296 712.3339218863994 688.0207824531419 1.2220810094728838 1.2298316205273883 1.2064039983725177 1.2510424873611308 1.0830527919520332 1.0894723767019876 1.1484002418741805 0.9520074299004562 1.0744377129184206 1.035337798004544 1.0 9.42630833361089 -7.122570907683793 0.7060766606147939 1.0288592353044699 1.243543391339028 0.7399096072267761 0.04911413942348864 0.282658031621122 0.2653353209247072 0.009428358375142526 0.02943418881996884 7.54100263110125e-08 7.122570907683793 0.21468415603455804 LIVENLSS(ph)R ddPTM_A549_PD325901_60min_R1 2 LIVENLSSR 9 0 Q08170;A0A0D9SEM4;Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13243-3;Q13243;B4DJK0;B4DUA4 Q08170;Q13247;Q13243-3 SRSF4;SRSF6;SRSF5 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 1 LIVENLS(0.294)S(0.706)R;LIVENLS(0.188)S(0.812)R 96.171 0.00089888 112808000.0 2860.3999999999996 2791.3 2783.3999999999996 3025.5 3213.3 2688.3 2621.2 3065.8 3321.6000000000004 2843.3999999999996 3573.3 True False 3150.7857022848143 3026.532647068202 2972.2982619438994 3212.378263590961 2987.6088932832026 2666.407376103023 2720.951200375676 3004.6502139264257 3182.0047031751474 2663.8672387423203 3133.8067530149956 1.0054179949843696 0.9657687552547436 0.9484625237610101 1.025072225816213 0.9533481572878935 0.8508525209915087 0.868257494741143 0.9587860550225983 1.0153800007335427 0.8500419613236992 1.0 11.613700503061354 -8.675275975604013 5.230971955792611 1.0072155246373014 0.9439553908711076 0.0 0.06757131119352267 0.22693714400746326 10.470136772599123 0.00885712136869514 0.010008472264698937 2.1121464344022097e-09 8.675275975604013 -0.06326013376619377 LKAEATEAAR ddPTM_A549_PD325901_60min_R1 1 LKAEATEAAR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 69.45100000000001 0.0036368000000000004 4052900.0 1867.8 1983.8 2297.2 2127.9 2491.7 2622.4 2355.1 2462.4 2436.4 2338.3 2485.5 False True 2057.4176809983132 2150.9817881467047 2453.10180618579 2259.335550188465 2316.6915878983464 2601.0440438539495 2444.7246192601697 2413.2855002845695 2334.0065808092268 2190.659338943227 2179.7992568826508 0.9438564925197027 0.9867797602715224 1.125379687345151 1.0364878981652466 1.0628004301696417 1.1932493488293616 1.1215365871609622 1.1071136448297672 1.0707438189272114 1.0049821477947043 1.0 11.089979564418883 -5.573358371911762 7.066531669961354 1.0621974759551456 0.9540985601061872 0.35960400848772944 0.05616541520472667 0.1762964940459557 19.579573923605228 0.008768014426429412 0.03489320644441455 2.670801602173634e-06 5.573358371911762 -0.10809891584895837 LKAEGSEIR ddPTM_A549_MK2206_60min_R1 1 LKAEGSEIR 9 1 H7BZ94;P07237;I3L0S0;I3NI03;I3L3U6;I3L514 H7BZ94 P4HB Protein disulfide-isomerase 0 68.893 0.0043016999999999994 5052800.0 1815.5 2417.4 2045.7 1533.7 2781.5 2112.0 2058.4 2425.8 2974.5 3085.7 3557.4 False True 2121.9120152865517 2540.4353344497645 2335.811020960361 1909.4565688504088 2372.3450346307686 2335.4904381678643 2432.384635638829 2769.6645787009306 2300.780499300447 2388.638226888278 2673.9994007547166 0.7935349629052488 0.9500508241448167 0.8735271295502518 0.7140826465075043 0.8871898153609129 0.8734072406705436 0.9096429247337551 1.03577606558895 0.8604267071455097 0.8932830075482076 1.0 11.384783426784342 -7.673643072624351 2.2292527407508658 0.9407192959832832 0.8453450773721686 0.3044096808565726 0.07069518212599218 0.33709979127155815 3.423431188627277 0.012339805213006446 0.019139977236990662 2.1201028379417415e-08 7.673643072624351 -0.09537421861111461 LKAEGSEIR ddPTM_A549_PD325901_60min_R1 2 LKAEGSEIR 9 1 H7BZ94;P07237;I3L0S0;I3NI03;I3L3U6;I3L514 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 73.781 0.0022286999999999997 19825600.0 4591.8 4699.6 4927.3 4664.4 5798.1 4946.9 5224.700000000001 5601.299999999999 5336.7 5662.9 7491.8 False True 5057.956155695499 5095.651785247638 5261.696208261908 4952.509394379004 5390.8614583591125 4906.61408653947 5423.52881756554 5489.577677365158 5112.41705787416 5305.343527563441 6570.356094433087 0.7698146162855602 0.7755518440720539 0.8008235980877846 0.7537657507749318 0.8204823879982193 0.7467805421835101 0.825454319311669 0.8355068733666281 0.7781034976484447 0.8074666656284487 1.0 12.68175584725702 -10.981414012735085 0.5134593912503101 1.0639808905936685 0.7828813893971504 0.07413127282395393 0.06367240786537252 0.3987190974940616 0.12111985744362647 0.05766495487630475 0.006050448710979332 1.043724762463358e-11 10.981414012735085 -0.28109950119651816 LKAEPAAPPAAPS(ph)TPAPPPAVPK ddPTM_A549_MK2206_60min_R1 2 LKAEPAAPPAAPSTPAPPPAVPK 23 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 LKAEPAAPPAAPS(0.5)T(0.5)PAPPPAVPK;LKAEPAAPPAAPS(0.5)T(0.5)PAPPPAVPK 78.413 2.2281999999999998e-05 6611000.0 1515.23 2387.9 1983.98 1769.34 2436.1000000000004 1838.9 2234.65 1818.0500000000002 2596.2 2803.3999999999996 3001.1000000000004 True False 1770.9637801832228 2509.433910454454 2265.3381968836766 2202.8283794286895 2077.7529170821576 2033.4911774369725 2640.6569792218784 2075.764155044614 2008.164845279482 2170.109992954142 2255.844043853651 0.7850559461361927 1.112414626929438 1.0042086921105622 0.9764985241025816 0.9210534401716616 0.9014325183416343 1.1705849020975994 0.9201718357704344 0.8902055311629348 0.9619946905757502 1.0 11.13945161616818 LKAEPAAPPAAPS(ph)TPAPPPAVPK ddPTM_A549_PD325901_60min_R1 1 LKAEPAAPPAAPSTPAPPPAVPK 23 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 LKAEPAAPPAAPS(0.5)T(0.5)PAPPPAVPK 84.762 5.6812e-06 7715200.0 1461.7 1636.6 1562.6 1738.8 2174.3 1582.1 1772.2 1772.4 1722.9 1844.5 2072.9 True False 1610.0907079533326 1774.522025648199 1668.647432677136 1846.2017268986801 2021.5846689277914 1569.2159021435832 1839.6420407850505 1737.0480915790988 1650.4925045461405 1728.0379552156617 1817.9464411957538 0.8856645451525491 0.9761134791633397 0.9178749136193384 1.0155424192168947 1.1120155264849798 0.8631804912313213 1.0119341247341844 0.9555001468781202 0.9078884103211146 0.9505439302595984 1.0 10.828093981356105 -6.253401159208929 0.001800869706715802 1.9134235034020042 5.5175184033516656e-05 0.005182921687513331 0.06733277352916733 958304.0136946068 356.384560657203 187495.09956012783 191162.81175834054 5.579545722005664e-07 6.253401159208929 -1.9133683282179708 LKAEPAAPPAAPST(ph)PAPPPAVPK ddPTM_A549_PD325901_60min_R1 1 LKAEPAAPPAAPSTPAPPPAVPK 23 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 LKAEPAAPPAAPS(0.314)T(0.686)PAPPPAVPK 96.338 1.5922000000000002e-07 9336200.0 1201.0 1139.9 1794.0 1686.0 1867.0 1844.8 1736.8 1536.0 1272.6 1618.5 1712.6 True False 1322.92463587053 1235.9633734793988 1915.7516281983756 1790.1403908161822 1735.868360800343 1829.7765604414906 1802.8948744134282 1505.3632750313104 1219.1170475857089 1516.3076337850612 1501.9610570658735 0.8807982268560967 0.8228997467443602 1.275500199679514 1.191868712171057 1.1557345995317712 1.218258324231132 1.2003605991858657 1.0022651838737304 0.8116835265804367 1.0095518966032409 1.0 10.552631691717806 -8.513739307146967 8.574785275587326 0.910789095337368 1.110938402125504 0.20920516132111067 0.14097727414348293 0.15509883602625463 98.34212382078127 0.02556827408914994 0.029933184549807937 3.0638019825117594e-09 8.513739307146967 0.20014930678813603 LKAESISEEADS(ph)EPGR ddPTM_A549_PD325901_60min_R1 1 LKAESISEEADSEPGR 16 1 Q9NSI6-3;Q9NSI6-2;Q9NSI6 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 LKAESISEEADS(1)EPGR 135.21 6.7789e-11 11221000.0 2722.2 3183.9 3067.6 3503.0 3368.1 2679.5 3058.6 3369.9 3045.2 3562.5 3945.2 True False 2998.555740022277 3452.2184268980236 3275.785782977334 3719.3723541097766 3131.5362753142113 2657.6790403853947 3174.9966967301407 3302.684700864592 2917.220833968256 3337.5631420199456 3459.965410683336 0.8666432706996537 0.9977609649618485 0.9467683615745665 1.0749738545435945 0.9050773356418437 0.7681230084495292 0.9176382766505997 0.9545426930185174 0.8431358374163952 0.9646232681154995 1.0 11.756541899956153 LKAEVDNRS(ph)PQK ddPTM_A549_MK2206_60min_R1 4 LKAEVDNRSPQK 12 2 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK 113.4 1.1411e-05 298180000.0 18657.0 20762.8 19472.799999999996 17216.0 24044.9 21198.800000000003 19575.1 19327.3 27214.6 28267.5 28707.300000000003 True False 21805.845480143867 21819.537834910898 22234.33585029912 21433.920772855596 20507.927062086426 23442.042945375426 23131.64228580144 22067.003962373852 21050.53655278599 21881.85211736864 21578.48512882609 1.0105364371020675 1.0111709744518993 1.0303937332744872 0.9933005326783865 0.9503877097790551 1.0863618463216336 1.071977117378853 1.0226391626025297 0.9755335662865958 1.014058771351715 1.0 14.397305966625497 -8.747215802757161 24.029878716713224 0.9884464076497991 1.0224631578103587 0.08139203681815188 0.03550788581742937 207.5409965971173 350627.07103209983 0.00619459627500032 0.007005481150958795 1.7897163154710237e-09 8.747215802757161 0.034016750160559606 LKAEVDNRS(ph)PQK ddPTM_A549_PD325901_60min_R1 8 LKAEVDNRSPQK 12 2 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK 112.5 1.6134000000000002e-05 504588000.0 44680.299999999996 43867.799999999996 44770.700000000004 45841.299999999996 54526.100000000006 51243.50000000001 46805.0 51391.200000000004 49402.799999999996 53033.0 53986.799999999996 True False 49216.21116410159 47564.69346005748 47809.10893008974 48672.81298785399 50696.37484083321 50826.18992572827 48586.18988767878 50366.16220038354 47326.57211886475 49684.48732933157 47346.765850521944 1.0394841185030812 1.0046027982190706 1.0097650403625762 1.0280071323460296 1.070746310336936 1.0734881044714055 1.0261775860482174 1.063771966165421 0.9995734929029588 1.0493744701843 1.0 15.530978261404291 -8.787882969109152 24.838804559271658 0.9997985822870863 1.0386972028561785 0.04399932299271725 0.02627700772223122 157.21471543083507 147673.14334083823 0.004008338730680829 0.004267787566667794 1.629735144043959e-09 8.787882969109152 0.03889862056909221 LKAEVDNRSPQK ddPTM_A549_MK2206_60min_R1 1 LKAEVDNRSPQK 12 2 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 0 35.204 0.055156 1882800.0 2282.9 2684.5 2121.2 2244.5 3462.6 2623.0 2183.1 2145.6 3840.7 3470.6 3505.6 False True 2668.1977084536866 2821.129583573423 2422.018056245354 2794.4026007594325 2953.2561268784843 2900.5641189935163 2579.741011495886 2449.7453706244182 2970.787582337612 2686.5890495636163 2635.062770361988 1.0125746295171354 1.0706119092509794 0.9191500420738108 1.0604690833894463 1.1207536154718565 1.1007571248843744 0.9790055252237874 0.929672491364556 1.1274067607617198 1.0195540993486656 1.0 11.363621613663605 LKATVT(ph)PS(ph)PVKGK ddPTM_A549_PD325901_60min_R1 1 LKATVTPSPVKGK 13 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 LKAT(0.062)VT(0.962)PS(0.976)PVKGK 50.053000000000004 0.014362 94435000.0 3026.9 2890.5 3173.8 2367.6 3326.6 3289.2 3169.1 3675.4 3388.8 3330.0 3420.3 True False 3334.1886597139937 3134.0925792106327 3389.193153609815 2513.8412747902685 3092.9510921469864 3262.413845730784 3289.7018346980594 3602.091263704478 3246.380520869445 3119.7432316986456 2999.6247830680873 1.1115352421857598 1.044828205481423 1.1298723669509319 0.8380519086854097 1.031112661025371 1.0876073114697733 1.0967044455917832 1.2008472806456059 1.0822622013240502 1.0400444913339122 1.0 11.550566332895894 -7.034171357529963 22.572535134910332 1.0610493807073116 1.0260456042601827 0.05198915073589638 0.08523825790402795 643.9662491784273 425383.75772986346 0.013348254019056656 0.023133642867458736 9.243333921011607e-08 7.034171357529963 -0.03500377644712893 LKATVT(ph)PSPVK ddPTM_A549_MK2206_60min_R1 2 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKAT(0.018)VT(0.886)PS(0.095)PVK;LKAT(0.01)VT(0.61)PS(0.38)PVK 114.64 8.8789e-06 530190000.0 7513.3 9502.099999999999 10399.0 8425.3 12105.6 8085.4 8691.2 8266.2 12619.3 11628.5 12185.0 True False 8781.361357451093 9985.716303249403 11873.7345685911 10489.498878226088 10324.882276191353 8940.991661345852 10270.278539284976 9437.959164175789 9761.048698881197 9001.613773656005 9159.128211108176 0.9587551516967598 1.0902474638512802 1.2963826135975096 1.1452507964136194 1.127277841101662 0.9761836995034343 1.1213161670593494 1.0304429577401752 1.0657180982621264 0.9828024639658239 1.0 13.160994570171448 -7.171426753806149 8.295839843561183 1.035837411599573 1.1329519114354438 0.2388474764420324 0.08253474882182371 0.3693091957193536 31.12787662212644 0.01198746866580399 0.020802009142553986 6.738655370796525e-08 7.171426753806149 0.09711449983587084 LKATVT(ph)PSPVK ddPTM_A549_PD325901_60min_R1 2 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKAT(0.11)VT(0.831)PS(0.059)PVK;LKAT(0.018)VT(0.596)PS(0.386)PVK 105.99 6.5434e-05 915790000.0 13597.3 13581.9 14638.4 14500.9 16988.0 16451.1 15776.5 16514.5 17407.5 16014.4 15878.8 True False 14977.68788619679 14726.49437868219 15631.849851850113 15396.587659066641 15794.82148541844 16317.12769594482 16376.883340732058 16185.105342125382 16675.923311211893 15003.248050965403 13925.808264006526 1.0755345472412554 1.0574965631794002 1.1225093406070457 1.1056153701944598 1.1342121897687387 1.171718537739676 1.1760095378492843 1.1622381290397608 1.1974833341855984 1.0773700001129336 1.0 13.765473444610862 -4.047517809872752 13.37966437644237 1.110301505198599 0.5559815541969014 0.0 0.05750763026787828 0.0 0.0 0.010323939819052988 0.0 8.963594266188264e-05 4.047517809872752 -0.5543199510016975 LKATVT(ph)PSPVKGK ddPTM_A549_MK2206_60min_R1 2 LKATVTPSPVKGK 13 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKAT(0.071)VT(0.577)PS(0.352)PVKGK;LKAT(0.007)VT(0.606)PS(0.387)PVKGK 100.43 5.279e-05 575350000.0 11074.7 13712.7 15054.3 13093.3 19348.5 12993.8 13525.3 10568.9 21482.7 20284.3 21076.7 True False 12943.838609580815 14410.617858322696 17189.226109812564 16301.15908778058 16502.36128080296 14368.795291413628 15982.671935681044 12067.07394089878 16616.90275082255 15702.062541941812 15842.773702672432 0.8170184623288148 0.9096019503132742 1.084988426421379 1.0289334048261274 1.0416333396228001 0.9069620990035244 1.0088304128831314 0.7616768482190243 1.0488632270256777 0.9911182749074499 1.0 13.951537319561393 -5.532740440718006 5.450010216511476 1.0021990127240652 0.8361066627073328 0.24800741277861504 0.08467263276722237 0.13309169046907604 12.791883929790894 0.011520741741850865 0.05272214426149696 2.932645438645418e-06 5.532740440718006 -0.1660923500167324 LKATVT(ph)PSPVKGK ddPTM_A549_PD325901_60min_R1 1 LKATVTPSPVKGK 13 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKAT(0.135)VT(0.512)PS(0.352)PVKGK 102.78 4.4723e-05 340340000.0 6898.8 6555.0 8786.5 8748.6 8198.6 13041.0 10485.0 11081.0 9755.4 8291.2 9614.2 True False 7599.161097371859 7107.412854774501 9382.804727516736 9288.981152487808 7622.758619634543 12934.798419729772 10884.012412612155 10859.980762123672 9345.414463317325 7767.6922170149555 8431.714349435199 0.9012593148249729 0.8429380503444823 1.1127991697376758 1.1016717084480019 0.9040579772659347 1.5340650647867613 1.290842165845102 1.2879920158646185 1.1083646902653115 0.9212470791939574 1.0 13.041610276680634 -5.765820380116339 24.081841209558963 1.112724647160757 0.8720986211554203 0.2486820865189585 0.17444103453284107 72.12646647456265 396489.9677035086 0.024521666613738544 0.08038046515907098 1.7146663298374448e-06 5.765820380116339 -0.24062602600533678 LKATVTPS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKATVT(0.013)PS(0.987)PVK;LKATVT(0.008)PS(0.992)PVK 128.31 9.410299999999999e-08 9679000.0 4687.5 5251.9 5211.9 4772.0 7911.8 5524.6 5612.0 5757.9 9260.3 7856.799999999999 8266.5 True False 5478.635401628044 5519.199277321386 5951.025790752949 5941.140214223218 6747.984700698088 6109.2095050673215 6631.6277570953725 6574.0999578292085 7162.85683566042 6081.943423215418 6213.699906206463 0.8817026062291469 0.8882307418497335 0.9577266170850727 0.9561356846810379 1.0859849691096222 0.9831838674676302 1.0672590979927221 1.058000878230821 1.1527522963421366 0.9787958084587506 1.0 12.601236852114408 -6.28426473636029 0.8088470285957143 1.0706110503738857 0.8600565446815631 0.5643989619553388 0.05247507829078107 0.48653670264011334 0.47892330537002636 0.009884213602744319 0.06704412826024768 5.196791150074318e-07 6.28426473636029 -0.2105545056923226 LKATVTPS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKATVT(0.041)PS(0.959)PVK;LKATVT(0.172)PS(0.827)PVK 120.84 9.4232e-06 14483700.0 6120.8 5381.6 6083.200000000001 6531.9 6128.299999999999 6660.4 7192.4 7215.5 6915.5 6811.5 7153.1 True False 6742.179110105189 5835.126318726841 6496.0425332532695 6935.360627978776 5697.869349487277 6606.15991064858 7466.110717832294 7071.581192049754 6624.865584299056 6381.42072754214 6273.314047236887 1.0747396128007995 0.9301505192932199 1.0355041186108775 1.10553378577205 0.9082710201630879 1.053057420831386 1.190138204721439 1.1272480763440287 1.056039205819293 1.017232786289867 1.0 12.615012071613371 LKATVTPS(ph)PVKGK ddPTM_A549_MK2206_60min_R1 2 LKATVTPSPVKGK 13 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKAT(0.001)VT(0.157)PS(0.842)PVKGK;LKAT(0.003)VT(0.119)PS(0.878)PVKGK 84.14 0.00013128 71752000.0 6533.7 8224.099999999999 8303.2 7005.6 10870.4 8029.0 7177.5 6383.7 11937.9 10900.2 12696.2 True False 7636.428826371655 8642.67156202876 9480.718614282676 8721.97231449333 9271.378559931805 8878.623450781146 8481.558842935152 7288.609024261326 9233.98471090899 8437.837249482316 9543.383142705916 0.8001804718705273 0.9056192581594529 0.9934337197316515 0.9139287592324745 0.9714980967748312 0.9303433926958229 0.8887371193325373 0.7637342979184555 0.96757979563742 0.8841557677511274 1.0 13.2202850789819 -8.977434906526904 24.999953309187752 0.9856970570573167 0.9011656189293773 0.051146883502627305 0.07022637301586922 155.84686040441744 172665.3122452645 0.011386507572471198 0.011711250237263139 1.0533315520664945e-09 8.977434906526904 -0.0845314381279394 LKATVTPS(ph)PVKGK ddPTM_A549_PD325901_60min_R1 3 LKATVTPSPVKGK 13 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKAT(0.009)VT(0.038)PS(0.953)PVKGK;LKATVT(0.108)PS(0.892)PVKGK;LKAT(0.001)VT(0.161)PS(0.838)PVKGK 119.4 2.5022e-06 458193000.0 17538.8 16912.4 22840.2 24095.6 21772.8 34649.9 28179.6 29657.5 27983.1 24666.199999999997 26828.3 True False 19319.326064617842 18337.667302072965 24390.273321280136 25583.93048692194 20243.553640082322 34367.72270253772 29251.9900984688 29065.95789664134 26807.06762085154 23108.771922439984 23528.589178605835 0.8211000633299591 0.7793781073260061 1.0366228563953939 1.0873550595283883 0.8603811085489758 1.460679280072931 1.2432530431984914 1.235346398205233 1.1393402051163686 0.9821571428282838 1.0 14.522127195817117 -5.855250009883791 3.415982580006521 1.10579176780393 0.7956535154212951 0.39731208711824295 0.15129321807926102 0.18811773739257784 4.247199465684232 0.02159741575992079 0.08069410043947933 1.3955647463641228e-06 5.855250009883791 -0.3101382523826348 LKDDEVAQLK ddPTM_A549_MK2206_60min_R1 2 LKDDEVAQLK 10 1 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ; 122.7 3.4764e-05 14760600.0 6359.7 7152.700000000001 7855.0 7212.7 9059.2 7279.799999999999 8191.3 7614.7 9463.5 9291.7 10086.5 False True 7433.061880263228 7516.741878348161 8968.957114749792 8979.811823790405 7726.603680649679 8050.14360405985 9679.553180095394 8694.107044040722 7320.032360104142 7192.698516634088 7581.743676761807 0.9803894984007053 0.9914265370625918 1.1829675991605757 1.184399289481878 1.019106423279894 1.0617799740096328 1.276692221838548 1.1467160345565797 0.9654813816167624 0.9486865849448128 1.0 12.888313967428154 -8.767146911176296 24.994939585924225 0.98369953396759 1.1082268279237473 0.317504724785457 0.08694742901616188 129.59227740954537 567520.3736980404 0.015481925306398723 0.016701794341136098 1.7094369566587718e-09 8.767146911176296 0.12452729395615725 LKDDEVAQLK ddPTM_A549_PD325901_60min_R1 4 LKDDEVAQLK 10 1 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ;;; 119.45 5.916e-05 30945400.0 14296.3 13225.3 14335.1 13667.1 18780.5 15731.0 14453.0 15350.0 17428.6 16318.0 15477.3 False True 15747.649851620194 14339.842445194385 15307.966089959056 14511.285726763845 17461.422469207737 15602.891951596423 15003.016823985063 15043.83220815795 16696.136551589112 15287.678695152688 13573.690218688325 1.16015980900601 1.0564439157047518 1.127767456257619 1.0690744737038889 1.2864167509264917 1.1494952146553545 1.1053012542844711 1.1083082025435886 1.230036657872285 1.1262728446612502 1.0 13.7285253727048 -11.02953796741079 1.3228189342295085 1.0000358316670155 1.1507222522345708 0.06248441497287882 0.07320328393383493 0.3569865499453564 1.1134623934380592 0.04785579301934495 0.010775844520002681 9.342476897699462e-12 11.02953796741079 0.15068642056755532 LKDDEVAQLKK ddPTM_A549_PD325901_60min_R1 2 LKDDEVAQLKK 11 2 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ; 120.14 4.1977e-06 57848000.0 18937.199999999997 19009.9 20609.7 19891.8 22645.6 23463.0 21990.7 24481.0 22038.6 21948.7 23654.0 False True 20859.69060317017 20611.930988249856 22008.398178194006 21120.471308444427 21055.05117907886 23271.925107132854 22827.56812227276 23992.707250027015 21112.394283295947 20562.855336211433 20744.70795506024 1.0055427460516204 0.9935994776548303 1.0609162696274794 1.0181136969581934 1.0149601153552474 1.1218246676476422 1.1004044102102895 1.1565700178572287 1.0177243434341054 0.9912337826474704 1.0 14.340455726575737 -3.6012731873315142 16.54507551467273 1.0323708976648525 0.4522498072235328 0.0 0.05604773140333437 0.0 0.0 0.00790163601326423 0.0 0.0002504533313106881 3.6012731873315142 -0.5801210904413197 LKDISTLEPLK ddPTM_A549_PD325901_60min_R1 1 LKDISTLEPLK 11 1 Q92688;Q92688-2 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 96.604 1.7311e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LKDLFDYS(ph)PPLHK ddPTM_A549_MK2206_60min_R1 5 LKDLFDYSPPLHK 13 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDY(0.056)S(0.944)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK 147.17 4.0542e-13 1546540000.0 54504.17 58338.509999999995 58769.0 51627.32 78270.68 62253.869999999995 57646.619999999995 56929.53 88939.4 82778.64 83609.93 True False 63703.14139698203 61307.69097507696 67103.32790283019 64276.015717638445 66757.1666565428 68841.53320262562 68120.26466406425 64999.46521687358 68794.76790703723 64078.88773173766 62847.27686432335 1.0136181641490425 0.9755027430612452 1.0677205322307748 1.0227335045303474 1.062212556968224 1.0953781394736142 1.0839016113796687 1.0342447351727972 1.0946340293399426 1.0195968851613595 1.0 15.939562614418808 -5.7632729961290385 24.99999325768857 1.0516742729017898 0.9945604471797085 0.34434925846665854 0.031231759750689304 47.13694483209459 642723.9634949198 0.005329510833811565 0.017913398444041218 1.7247533766814948e-06 5.7632729961290385 -0.057113825722081346 LKDLFDYS(ph)PPLHK ddPTM_A549_PD325901_60min_R1 4 LKDLFDYSPPLHK 13 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK 142.94 6.5636e-13 1960770000.0 76902.0 81037.0 85349.0 83255.0 92669.0 88908.0 82935.0 89642.0 89207.0 91122.0 98141.0 True False 84709.03442773983 87866.27238937633 91141.29638523032 88397.47226417628 86160.24913069472 88183.96272535338 86091.13680877358 87854.0199872115 85457.940015699 85368.54136902218 86070.27916705707 0.9841844972214491 1.0208665899506768 1.0589171694021198 1.0270382891706702 1.001045308142466 1.0245576472941813 1.0002423326834577 1.0207242364892566 0.9928855912019344 0.9918469208555387 1.0 16.3932275277344 -8.111784613573885 0.8980987945169311 0.9967995777463552 1.0220119756614552 0.201269139079562 0.018431772230874548 0.5629895747586435 0.9033135386203996 0.0037335313200467183 0.005397529488878935 7.730638876527472e-09 8.111784613573885 0.025212397915099993 LKDLFDYSPPLHK ddPTM_A549_MK2206_60min_R1 2 LKDLFDYSPPLHK 13 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 0 ; 97.12100000000001 0.00058581 19132600.0 1845.45 2396.21 2407.1800000000003 1696.41 2399.2200000000003 1867.41 2138.01 1900.31 3069.6 2655.4 3018.3 False True 2156.916843079353 2518.1668539595744 2748.5543204943847 2112.0305261547383 2046.2979162275162 2065.018086713565 2526.4587421502993 2169.684761955301 2374.340501143941 2055.543295744607 2268.772809157801 0.9506975905093069 1.1099246446339208 1.2114718183327862 0.9309131869130397 0.9019404269866622 0.910191658846673 1.1135794346407717 0.9563252667686533 1.04653074629598 0.9060154844273068 1.0 11.147696432010004 -6.281657750962103 24.918996450771676 1.0028292911227072 1.0926207168784925 0.21559699803831323 0.08749980381430934 948.0967910812827 1168520.3331200331 0.011648718495966468 0.02710504937611307 5.228080295066351e-07 6.281657750962103 0.08979142575578525 LKDLFDYSPPLHK ddPTM_A549_PD325901_60min_R1 2 LKDLFDYSPPLHK 13 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 0 ; 85.258 0.0011184 13592000.0 1853.9700000000003 1732.56 1883.17 1807.7 1868.23 1963.77 1787.3000000000002 2240.81 2002.86 2274.97 1959.05 False True 2042.1836695794213 1878.568911619848 2010.9732406211454 1919.3575234154282 1737.0119698436124 1947.7777082058685 1855.3166795480872 2196.115286668563 1918.686759333266 2131.3280059511912 1718.0992694411404 1.1886296129115395 1.0933995171483337 1.1704639402327843 1.1171400614353049 1.011007920635822 1.1336817044567147 1.0798658218110881 1.278223747445577 1.1167496508844756 1.2405150528027784 1.0 10.746597680505731 -10.309173267478252 0.9355913604622621 1.007048283205085 1.128878321606294 0.0 0.09495425780736842 0.43809990376109403 0.7451260166716768 0.03076063571410151 0.012074803881460776 4.9071206108246273e-11 10.309173267478252 0.12183003840120898 LKDLGHPVEEEDELES(ph)GDQEDEDDESEDPGKDLDHI ddPTM_A549_PD325901_60min_R1 3 LKDLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 36 2 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI 332.15 1.5766999999999992e-263 1026973500.0 13894.2 15919.7 16091.9 16301.6 17629.8 19900.5 18927.5 19216.4 18078.4 21656.3 20480.2 True False 15304.728955630573 17261.308989192003 17183.993102455657 17308.512808380223 16391.543667508246 19738.436925989754 19647.796370025404 18833.11382702582 17318.627717329473 20288.917522112715 17961.265234684408 0.8520963727029717 0.9610296804625577 0.9567250902387552 0.9636577703310301 0.9126051786070769 1.0989446827984872 1.0938982367502814 1.0485404887099943 0.9642209215799586 1.129592890980389 1.0 14.132601360113604 -3.8483049321999148 0.6880921331632179 0.9991658890499655 5.073786561656272e-14 0.34084753698664727 0.06624376605703873 14.685114008812468 1.0717066719550459 0.009430921081432196 17.834171518174294 0.00014180615052223814 3.8483049321999148 -0.9991658890499148 LKDPANFQYPAESVLAYK ddPTM_A549_MK2206_60min_R1 2 LKDPANFQYPAESVLAYK 18 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 135.28 8.6449e-13 24507000.0 3379.5 3498.8 3769.6000000000004 3324.3999999999996 4656.0 3504.2 3304.2 2778.1000000000004 4886.2 4554.8 4872.1 False True 3949.876979157754 3676.873975416912 4304.18596305039 4138.878149237984 3971.108567765902 3875.012118100297 3904.530369742431 3171.904182574434 3779.48350165804 3525.8675165540135 3662.223106880601 1.0785462446940242 1.004000539592682 1.1752932132844844 1.130154561436151 1.0843437037751649 1.0581037815036192 1.066163981764678 0.8661144037388236 1.0320189107422564 0.9627669897908727 1.0 11.83850396913036 -8.018892439691166 24.695667387096226 1.0025467143393645 1.08789109721738 0.44992551107338374 0.05917727480099237 581.8107953443093 760526.6235673765 0.009340076164082002 0.01216623098853278 9.574311658117364e-09 8.018892439691166 0.0853443828780156 LKDPANFQYPAESVLAYK ddPTM_A549_PD325901_60min_R1 2 LKDPANFQYPAESVLAYK 18 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 154.12 1.7347e-22 49737000.0 5975.5 5739.1 6196.0 7294.5 7826.6 8192.4 7552.0 7326.9 7653.3 7503.9 7901.3 False True 6582.128361069402 6222.754098373204 6616.497819574771 7745.064697988519 7276.886616304209 8125.683810581562 7839.3954926129645 7180.759231658143 7331.658416067664 7030.102473376413 6929.490190467465 0.9498719501939824 0.898010377001979 0.9548318328925176 1.1176961775114418 1.050133042444398 1.1726236111510249 1.1313091262322887 1.0362608264510331 1.058037202528036 1.0145194350729227 1.0 12.758533500409937 -6.090232779134079 5.870689643832646 1.0526981450713275 0.9243485018446933 0.5604498337931445 0.05285008181441099 0.15190170845474738 7.889422073192948 0.008430545502085022 0.022905480568614883 8.123949608140756e-07 6.090232779134079 -0.12834964322663422 LKDRLPS(ph)IVVEPTEGEVESGELR ddPTM_A549_MK2206_60min_R1 2 LKDRLPSIVVEPTEGEVESGELR 23 2 B5MBX5;B5MCP4;Q53QV2 B5MBX5 LBH Protein LBH 1 LKDRLPS(1)IVVEPTEGEVESGELR;LKDRLPS(1)IVVEPTEGEVESGELR 95.823 9.3506e-08 8986400.0 868.02 903.31 1061.88 797.1800000000001 1092.53 1010.94 956.03 887.74 1412.76 1233.5 1321.1 True False 1014.5205549485167 949.2846206510377 1212.470551369893 992.4891357867707 931.8202842657396 1117.916999792339 1129.728275947236 1013.5798635897288 1092.7721157141368 954.851493297044 993.034409494872 1.021636858952928 0.9559433304369699 1.2209753657847988 0.9994509014965769 0.9383564913321883 1.1257585730196311 1.1376526987840192 1.0206895691613624 1.1004373114019268 0.9615492516344418 1.0 9.955699899016315 LKDRLPS(ph)IVVEPTEGEVESGELR ddPTM_A549_PD325901_60min_R1 2 LKDRLPSIVVEPTEGEVESGELR 23 2 B5MBX5;B5MCP4;Q53QV2 B5MBX5 LBH Protein LBH 1 LKDRLPS(1)IVVEPTEGEVESGELR;LKDRLPS(1)IVVEPTEGEVESGELR 124.5 1.7119e-16 5583600.0 1402.81 1409.63 1638.25 1576.1100000000001 1779.48 2100.0 1600.42 1820.2199999999998 1852.6100000000001 1733.06 1969.0700000000002 True False 1545.2222385058592 1528.4244671969154 1749.4314965975423 1673.4627350944793 1654.4954636727332 2082.898296252781 1661.3248588834279 1783.9142841650335 1774.7512443248177 1623.6342958341304 1726.8868729631552 0.8948022378874311 0.8850750394403664 1.0130550668879097 0.9690633250474562 0.9580798195737015 1.2061579301247152 0.9620345634064438 1.0330232466843792 1.027717143555288 0.9402088354798516 1.0 10.753957860776904 -5.772689704140776 1.265917246612468 1.0207996397809793 0.8664089886823874 0.29488055585493067 0.0695308020523482 0.547259986177118 1.2806280179218779 0.009002935764421613 0.0860535902247498 1.6877584687957685e-06 5.772689704140776 -0.15439065109859196 LKDVLLQVDDERR ddPTM_A549_MK2206_60min_R1 1 LKDVLLQVDDERR 13 2 P35579;P35579-2 P35579 MYH9 Myosin-9 0 40.552 0.035248 1601100.0 542.52 443.83 291.69 499.46 483.97 422.24 226.38 440.5 637.01 519.73 639.26 False True 634.0841126594661 466.41905124879617 333.0560281096583 621.8277224216113 412.7786541111825 466.9211565397721 267.5103156898164 502.9422239746725 492.72825209594106 402.3226320318386 480.51409932154394 1.3195952284329502 0.9706667336241557 0.6931243611371919 1.2940884009430595 0.8590354678333068 0.9717116671478231 0.5567168914866897 1.046675268602515 1.0254189269194032 0.8372753944158833 1.0 8.908434953183415 -5.261583221760022 11.122680120459933 0.969594970368888 1.3200249678975486 0.23701161009517846 0.18875650654178872 0.06926349552265444 509.30657789353467 0.023481245082453195 0.18657948009563013 5.475411682312071e-06 5.261583221760022 0.35042999752866066 LKDVLLQVDDERR ddPTM_A549_PD325901_60min_R1 2 LKDVLLQVDDERR 13 2 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 67.93 0.0013713 6842300.0 1567.4099999999999 1794.22 1634.7199999999998 1448.27 1777.66 2025.17 2028.22 1910.07 1910.53 1576.4 1519.19 False True 1726.5323093337438 1945.4252162156372 1745.6619295699268 1537.7263486401855 1652.803294194074 2008.6776869629746 2105.4050219845712 1871.972155429073 1830.2370681470418 1476.8658349698933 1332.3392609388666 1.2958653699937501 1.4601575388874632 1.310223289779663 1.1541552468825302 1.2405273511413184 1.507632286950329 1.5802319151812312 1.405026640219204 1.373701970515617 1.1084758051257773 1.0 10.3797457752943 -10.527913558982444 0.8384448805639131 1.0000356051803903 1.3707495317962641 0.5044865613747205 0.11887136099270208 0.3770230325005162 0.4757740361120038 0.08496505867401899 0.024074275747538627 2.9654215617682245e-11 10.527913558982444 0.3707139266158739 LKEDILENEDEQNS(ph)PPK ddPTM_A549_MK2206_60min_R1 3 LKEDILENEDEQNSPPK 17 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK 137.72 3.6662e-13 169531000.0 9561.3 10882.5 10147.400000000001 9298.5 14472.2 10225.5 10665.4 10272.7 14825.5 14544.400000000001 16191.199999999999 True False 11175.01368865839 11436.372767084287 11586.45390531025 11576.632917425528 12343.35855120742 11307.555622862452 12603.165124826259 11728.886683824323 11467.547921458648 11258.809938475499 12170.478185613016 0.9182066241134726 0.9396814646612217 0.9520130374997794 0.9512060858143203 1.0142048950713185 0.9290970700090779 1.0355521724466612 0.9637161749066928 0.942243003649165 0.9250918301455715 1.0 13.571098233094888 -5.836897621960573 1.1775335416643695 0.9751414362037332 0.9172316877833148 0.195888035520847 0.033156291525813474 0.771685728463432 1.5589197485086996 0.0046468230560210355 0.042397746234111085 1.4558022224309885e-06 5.836897621960573 -0.057909748420418405 LKEDILENEDEQNS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 LKEDILENEDEQNSPPK 17 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK 192.94 1.1973e-40 308730000.0 17476.6 15829.099999999999 15692.7 18278.1 20014.2 16737.7 16548.6 18832.4 19605.8 18148.4 19550.0 True False 19250.811566407065 17163.07380923129 16757.700989871046 19407.09672442303 18608.471637241695 16601.393720566746 17178.366028741388 18456.773008268003 18781.83640700606 17002.506926774684 17145.473937660758 1.122792617830286 1.0010265024830765 0.9773833637262163 1.1319078606392166 1.0853285073891952 0.9682668312889902 1.0019184124743488 1.0764807712738067 1.095439908823457 0.9916615305353537 1.0 14.065540163558351 LKEDILENEDEQNS(ph)PPKK ddPTM_A549_MK2206_60min_R1 2 LKEDILENEDEQNSPPKK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK 231.29 3.6369999999999995e-65 256170000.0 28276.0 30527.0 30184.0 25808.0 35138.0 30361.0 27969.0 29938.0 38788.0 39197.0 40056.0 True False 33048.2975181727 32080.69390864068 34464.54507340644 32130.961158565144 29969.246747027144 33573.7808679993 33050.605263399964 34181.80318127978 30002.579931708096 30342.3704765012 30108.989710640053 1.0976222661663717 1.0654855648412493 1.1446596317121596 1.067155074526149 0.9953587627829463 1.1150749723141606 1.0976989125517018 1.135269017983704 0.9964658469130118 1.0077511988314465 1.0 14.8779066796445 -8.780836607831858 24.96446803682931 0.9983310780256661 1.0880135151779364 0.5152799564537578 0.03811801775249222 129.42290265692867 166568.18189181035 0.006567047235733896 0.006996372221627302 1.6563930216795087e-09 8.780836607831858 0.08968243715227031 LKEDILENEDEQNS(ph)PPKK ddPTM_A549_PD325901_60min_R1 3 LKEDILENEDEQNSPPKK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK 147.93 1.2570999999999999e-17 456324000.0 11453.400000000001 10689.6 11169.7 11070.7 13130.8 12073.0 11502.800000000001 12120.7 12131.7 12520.6 13123.1 True False 12616.140736452562 11590.450107154464 11927.74301086254 11754.511995616076 12208.537906800831 11974.681490790394 11940.545348573685 11878.943129994801 11621.84683812318 11730.04717922103 11509.04189418496 1.0961938319841353 1.0070734135576165 1.0363801887704598 1.021328456676758 1.0607779534601658 1.0404585890716673 1.0374925609234897 1.0321400546814186 1.0098014191776654 1.0192027526763747 1.0 13.49048011640435 -8.730275618064317 1.5552775810020891 1.0033772489853257 1.0413715901180485 0.294426836824352 0.021902030666288284 0.2601678644534416 1.2324777403868854 0.0038245756635136015 0.0041492595437812195 1.8609057676769866e-09 8.730275618064317 0.03799434113272282 LKEDILENEDEQNS(ph)PPKKGK ddPTM_A549_MK2206_60min_R1 2 LKEDILENEDEQNSPPKKGK 20 3 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPKKGK;LKEDILENEDEQNS(1)PPKKGK 128.52 1.9049e-17 26747000.0 2744.2 3532.5 4070.8 2931.7 4631.8 2791.1 3489.5 2924.7 5602.3 4612.0 5174.5 True False 3207.353870751504 3712.2891614725727 4648.100652160847 3649.966631609013 3950.4683557083567 3086.4523494177647 4123.496981180381 3339.2851815181034 4333.387995034758 3570.145996826888 3889.5288410651806 0.8246124406865545 0.9544315810898912 1.1950292290127165 0.9384084244531372 1.0156675826644563 0.7935285931888124 1.0601533372487157 0.8585320531017355 1.1141164321198407 0.9178864954371114 1.0 11.925379689275298 -8.779627097504434 24.99995687110042 1.053888307275958 0.9626102574890206 0.004552458698318884 0.11696663083381785 373.1832384842159 512957.5091415827 0.018930234176270516 0.020171597403882652 1.6610125066378765e-09 8.779627097504434 -0.09127804978693732 LKEDILENEDEQNS(ph)PPKKGK ddPTM_A549_PD325901_60min_R1 2 LKEDILENEDEQNSPPKKGK 20 3 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPKKGK;LKEDILENEDEQNS(1)PPKKGK 109.06 1.1771999999999998e-10 40431000.0 4482.4 4505.200000000001 5899.1 6078.5 5680.4 8425.5 6687.3 6408.0 6350.4 5956.4 6549.200000000001 True False 4937.449948231525 4884.869015000775 6299.4484001700375 6453.955139724887 5281.428300316158 8356.885521465625 6941.78886093097 6280.187413021251 6083.514772110866 5580.311887474419 5743.689918799382 0.8596303104857743 0.850475754098834 1.0967598337005677 1.1236600915033332 0.9195183540514228 1.4549680849088187 1.2085939455418981 1.0934064167471655 1.059164902373859 0.9715552138721453 1.0 12.487762149998945 -5.758867427030441 24.89049181079275 1.0759305934925443 0.855052935272549 0.3136748575976577 0.13675918392400851 60.39005262248597 584395.0252406509 0.01912692621695451 0.06783237444509371 1.7423386594668788e-06 5.758867427030441 -0.22087765821999528 LKEEEEDKK ddPTM_A549_PD325901_60min_R1 2 LKEEEEDKK 9 2 P27797 P27797 CALR Calreticulin 0 ; 61.398 0.0025491 11612600.0 4105.8 4441.2 4196.5 4012.5 5295.2 4239.8 4117.9 4102.8 4331.5 3979.6 5345.5 False True 4522.617793469789 4815.475510392756 4481.299725604505 4260.343011951322 4923.2834194483 4205.272474501213 4274.608937901342 4020.9664354156666 4149.462118196998 3728.327376837216 4688.0373879164 0.9647145317413666 1.0271836830492933 0.9559010210019293 0.9087689921015825 1.0501800672789547 0.8970219574913092 0.9118120407741017 0.8577078428981529 0.8851171129505919 0.7952853333565825 1.0 12.194768360212882 -7.299086254247282 24.991107208037505 0.9312761164180368 0.9784500074950817 0.21576187298860738 0.0642327815262614 922.1551489924884 612151.9712406632 0.009091504214351715 0.01453401176221154 5.022428303007725e-08 7.299086254247282 0.04717389107704495 LKEEEEDKKR ddPTM_A549_MK2206_60min_R1 1 LKEEEEDKKR 10 3 P27797 P27797 CALR Calreticulin 0 37.426 0.037315 2109200.0 1799.0 1623.7 1649.7 1696.3 1269.6 1175.5 1195.5 1214.7 1337.9 2226.4 2408.1 False True 2102.6272186728215 1706.339394616564 1883.652266352988 2111.893576149802 1082.8435218289496 1299.8906297662522 1412.7068751973486 1386.8874448627341 1034.8677861872814 1723.454693698046 1810.1023098210592 1.1616068369531447 0.9426756627835292 1.040633038327651 1.1667260821066943 0.5982222750359321 0.7181310264693023 0.7804569208781377 0.7661928485135392 0.5717178418989947 0.9521310946608432 1.0 10.821855527661205 -6.752657792787376 24.99685669966411 0.7720136733107593 1.0655881278182509 0.5557861575888506 0.13243499738617828 148.56324746590047 422883.18364139023 0.02400534325373157 0.0493774517000652 1.7674299384087672e-07 6.752657792787376 0.29357445450749153 LKEEEEDKKR ddPTM_A549_PD325901_60min_R1 2 LKEEEEDKKR 10 3 P27797 P27797 CALR Calreticulin 0 ; 47.288000000000004 0.0094932 7500300.0 1572.49 1305.7199999999998 1324.27 1280.1100000000001 1554.92 1763.3899999999999 1356.1399999999999 1470.12 1504.96 2077.46 1713.65 False True 1732.1280271940454 1415.7576068247376 1414.142925682421 1359.1794873592537 1445.707783382791 1749.0295364900905 1407.7486498082822 1440.7973033131711 1441.7117648393755 1946.2888210584595 1502.8819137223709 1.1525376753679022 0.9420285079605211 0.9409541180649654 0.9043820908010052 0.9619570041947143 1.1637837414371803 0.9366994418886441 0.9586896283451657 0.9592981003201457 1.295037755985664 1.0 10.553515941168579 -5.254178334877207 24.571125358213358 0.9774893033195636 1.152537780658949 0.07072202510595638 0.11543425404653702 539.0375079117449 1824026.4869631864 0.008563831294656142 0.1191803052322341 5.569569980319546e-06 5.254178334877207 0.17504847733938533 LKEEHGIELS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 LKEEHGIELSSPR 13 1 O14647;O14647-2 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 LKEEHGIELS(0.856)S(0.144)PR;LKEEHGIELS(0.5)S(0.5)PR 58.67100000000001 0.0030614 7348100.0 2035.83 2610.2 2799.1000000000004 1943.74 2880.0 2515.5 2313.62 2552.26 3824.8 3670.7000000000003 3811.2 True False 2379.4283327352355 2743.048030934382 3196.05446975126 2419.9563872578033 2456.355815112929 2781.6885403462406 2733.9748060176403 2914.05067096844 2958.4889069505275 2841.4863205881306 2864.773856231061 0.8305815579682951 0.9575094470260129 1.1156393593859575 0.8447285924486667 0.8574344567443614 0.9709976004897892 0.9543422773393004 1.0172009440222303 1.0327128965225756 0.9918710736652813 1.0 11.484205542537497 -8.05508893915699 2.085721874543601 1.0161873278949343 0.931480961323474 0.206052913228696 0.0741118519374468 0.3810430142237521 3.2937954068905757 0.012379085084476743 0.017007431523257146 8.80868461503379e-09 8.05508893915699 -0.08470636657146025 LKEEHGIELS(ph)SPR ddPTM_A549_PD325901_60min_R1 4 LKEEHGIELSSPR 13 1 O14647;O14647-2 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 LKEEHGIELS(0.587)S(0.413)PR;LKEEHGIELS(0.828)S(0.172)PR;LKEEHGIELS(0.889)S(0.111)PR;LKEEHGIELS(0.5)S(0.5)PR 78.234 0.00036029 36800800.0 10139.999999999998 10526.8 10465.04 12566.6 11438.6 11204.460000000001 10602.800000000001 11986.8 12186.300000000001 12079.7 13651.6 True False 11169.405335326535 11413.930379807807 11175.260545797735 13342.810341180673 10635.19219702774 11113.214592586872 11006.29535607479 11747.713870537309 11674.15218999979 11316.9856804655 11972.539744622483 0.9329186265882576 0.9533424505802474 0.9334076799216432 1.1144511211310577 0.8882987589834129 0.9282253247543755 0.9192949525198539 0.9812215387143605 0.9750773385607915 0.9452451962457314 1.0 13.547441604371606 -9.25669531338696 1.046843879600044 0.9937104937023524 0.956415012348583 0.0 0.05707959641781255 0.9082223597533226 2.0863969283358172 0.013745757962378915 0.011417921388808712 5.537384575208096e-10 9.25669531338696 -0.03729548135376948 LKEEISK ddPTM_A549_PD325901_60min_R1 1 LKEEISK 7 1 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 78.334 0.017001 6127800.0 4491.8 4577.7 5082.1 4362.4 5804.4 4649.1 4835.3 5441.3 6278.4 5223.6 5277.4 False True 4947.804229311609 4963.478844439545 5427.001867149927 4631.855540270765 5396.718968092936 4611.239271004192 5019.309987477684 5332.769002882726 6014.54068172412 4893.781004534848 4628.313256194932 1.0690296778613768 1.0724163576862475 1.172565806751728 1.0007653509777221 1.1660228401501354 0.9963109702724018 1.084479314523365 1.1522057189506112 1.2995102856691347 1.0573573424367053 1.0 12.176270797738564 -8.24827741326555 10.256277822753708 1.146198084204945 1.0804779644606117 0.04857137762766184 0.08647405398649886 0.8941685647244644 673.6911671837439 0.018552554686072222 0.023602310477877617 5.6457622657800344e-09 8.24827741326555 -0.06572011974433334 LKEGDTMMGQQVAK ddPTM_A549_PD325901_60min_R1 2 LKEGDTMMGQQVAK 14 1 F2Z3J9;Q14914-2;Q14914 F2Z3J9 PTGR1 Prostaglandin reductase 1 0 ; 42.788999999999994 0.017809000000000002 1651800.0 667.43 616.02 578.82 673.96 798.62 691.3 654.95 567.85 716.27 592.15 542.45 False True 735.1870022640031 667.9341673223779 618.1022059274155 715.5889785257854 742.5276862894324 685.6702819997847 679.8744806523916 556.5237862802926 686.167662796021 554.7615479430488 475.7320888738658 1.5453803084931874 1.4040132733183615 1.2992653226116462 1.504184803299057 1.5608105983498288 1.4412950020312405 1.429112091769474 1.1698260413706247 1.4423405081214722 1.16612177508618 1.0 8.89400553039534 -11.920600374615109 0.326820535890595 0.5585052003626957 1.4568073124633252 0.5740798100702111 0.11176792357488347 2.823343140899164 0.20546666902402472 1.0149249240499858 0.037654908694117174 1.2006035561403927e-12 11.920600374615109 0.8983021121006295 LKEGLDISHLQGQEELLS(ph)SQEK ddPTM_A549_MK2206_60min_R1 2 LKEGLDISHLQGQEELLSSQEK 22 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LKEGLDISHLQGQEELLS(0.934)S(0.066)QEK;LKEGLDISHLQGQEELLS(0.608)S(0.392)QEK 181.37 1.2177e-49 80181000.0 3331.2 3496.8 3292.3 3168.1 4148.1 3485.9 3382.3 3904.3 4492.2 4487.4 4502.1 True False 3893.425119979379 3674.7721839596024 3759.1976459440784 3944.2846422214134 3537.919984954842 3854.775624246856 3996.820128799659 4457.746481417281 3474.7238725693255 3473.6932233653497 3384.1043183611077 1.150503871542864 1.0858921115467453 1.1108397650592003 1.165532817892445 1.0454524010265223 1.1390829778302136 1.1810570103037734 1.3172603625812955 1.0267780025918658 1.0264734466127892 1.0 11.724558326306289 -8.964011185561214 24.99950225002268 1.0118136768887027 1.14558627265215 0.4494995967493447 0.06491006603280422 107.24100089009475 74494.99213878001 0.011413161955780246 0.012110091814800968 1.086397642317902e-09 8.964011185561214 0.13377259576344724 LKEGLDISHLQGQEELLS(ph)SQEK ddPTM_A549_PD325901_60min_R1 3 LKEGLDISHLQGQEELLSSQEK 22 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LKEGLDISHLQGQEELLS(0.5)S(0.5)QEK;LKEGLDISHLQGQEELLS(0.625)S(0.375)QEK;LKEGLDISHLQGQEELLS(0.614)S(0.386)QEK 215.68 1.0274999999999999e-73 32018000.0 4321.4 4115.1 4752.9 4386.4 6464.700000000001 4889.0 5054.200000000001 5811.4 5195.2 5912.2 5426.1 True False 4760.10534675346 4461.8939189447065 5075.4603755095095 4657.337965762811 6010.641774004273 4849.1856049427815 5246.54034676436 5695.487068044894 4976.863810794654 5538.902683017637 4758.724098881895 1.00029025592635 0.937623998834702 1.0665590755097643 0.9786946813867807 1.2630784321823842 1.0190096135395077 1.1025098824277462 1.1968517085037773 1.045839957808021 1.1639470093084514 1.0 12.216359097068992 -5.769402973438293 24.922305575856406 1.0544228991380282 0.9689571242818656 0.11561727913880437 0.0905870714717742 236.46887550805215 740047.3929490269 0.011963711649209013 0.03818351194271555 1.7005798410033239e-06 5.769402973438293 -0.08546577485616258 LKEGLDISHLQGQEELLS(ph)SQEKSPGTK ddPTM_A549_MK2206_60min_R1 2 LKEGLDISHLQGQEELLSSQEKSPGTK 27 2 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LKEGLDISHLQGQEELLS(0.374)S(0.374)QEKS(0.242)PGT(0.01)K;LKEGLDISHLQGQEELLS(0.726)S(0.075)QEKS(0.188)PGT(0.011)K 171.93 6.029600000000001e-49 17296100.0 2683.7 2891.0 2856.0 2481.6 3583.9 2834.8 2578.3999999999996 2674.7 3849.1 4221.200000000001 3314.3 True False 3136.642949834491 3038.1395515406116 3261.0237453501445 3089.592111403257 3056.7130575636224 3134.7766544120536 3046.8619046498065 3053.8469159252113 2977.2849957496537 3267.6279882492777 2491.267839973397 1.2590548874375491 1.2195154221446758 1.3089815928362676 1.2401685847782025 1.2269708654033216 1.2583057526426098 1.223016592500284 1.2258203902948557 1.1950882791396074 1.3116325494267895 1.0 11.282664420905144 -10.424417338443847 0.408116641436378 0.9458745964665195 1.259646455802304 0.0 0.09534952958309158 0.27234759729937635 0.06793233921340673 0.03580979304481739 0.006827361516266399 3.763419766018158e-11 10.424417338443847 0.31377185933578444 LKEGLDISHLQGQEELLS(ph)SQEKSPGTK ddPTM_A549_PD325901_60min_R1 1 LKEGLDISHLQGQEELLSSQEKSPGTK 27 2 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LKEGLDISHLQGQEELLS(0.399)S(0.399)QEKS(0.201)PGT(0.002)K 141.13 3.8905e-33 9162000.0 1941.1 1969.5 1581.6 1539.4 2144.0 1862.7 1978.4 2123.8 2310.1 2181.9 2171.6 True False 2138.1590430377055 2135.47667696085 1688.9368869334178 1634.485241768939 1993.4128363984648 1847.5307887762165 2053.68909462202 2081.4391429111306 2213.0145305891456 2044.1344616346166 1904.506966906604 1.122683760254556 1.1212753295564986 0.8868105584705075 0.8582196180798184 1.0466818294901101 0.9700835023864832 1.0783311010711214 1.092901826603401 1.161988151812138 1.0733142472851136 1.0 10.895201850118196 -7.774500399735352 23.700912372087508 1.080054276440944 0.9968296030816227 0.18098245789575473 0.0848414734236893 188.1264320898584 341379.33423305454 0.015401813142359477 0.021362073631522316 1.68073637871681e-08 7.774500399735352 -0.08322467335932127 LKEGLDISHLQGQEELLSS(ph)QEK ddPTM_A549_MK2206_60min_R1 1 LKEGLDISHLQGQEELLSSQEK 22 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LKEGLDISHLQGQEELLS(0.126)S(0.874)QEK 125.11 3.1322999999999996e-16 1792600.0 872.66 968.62 1095.9 1173.7 1331.4 1140.8 928.11 749.52 1185.8 1405.9 1501.7 True False 1019.9436735114089 1017.9186206894732 1251.3150989247986 1461.2565526893952 1135.5528236949156 1261.518698798247 1096.73557334957 855.7667553087322 917.218193333491 1088.3062135600437 1128.786445188441 0.9035754086692087 0.9017813998639403 1.1085490123119812 1.2945376505167472 1.0059943832027014 1.1175884545527544 0.971605902980594 0.7581299004399982 0.8125701697103295 0.9641382727433094 1.0 10.1405568534923 -7.995333571025182 12.794210306149653 0.8959610118454315 1.058189936378599 0.3126578464896944 0.11849121689055324 0.3772621467690212 1004.996291306169 0.020787503327072642 0.028423591145779706 1.0108027830021006e-08 7.995333571025182 0.1622289245331674 LKEGLDISHLQGQEELLSS(ph)QEK ddPTM_A549_PD325901_60min_R1 1 LKEGLDISHLQGQEELLSSQEK 22 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LKEGLDISHLQGQEELLS(0.209)S(0.791)QEK 143.89 3.31e-27 30561000.0 3844.6 3225.7 3332.2 3868.3 4128.2 4069.9 3915.1 3845.4 4022.6 3924.9 4501.5 True False 4234.900961755067 3497.541059595136 3558.343130146391 4107.236105453282 3838.249473516857 4036.756083771046 4064.091272924924 3768.700480342057 3853.5441109683143 3677.0811441723768 3947.844037359587 1.072712326444251 0.8859369890241093 0.9013383245317604 1.0403744592201014 0.9722393886876975 1.0225216714667698 1.029445751773691 0.954622433074295 0.9761135633781666 0.9314149974961262 1.0 11.94684928079572 -6.259827757713515 24.998362591929727 0.9929729370714547 0.946589994106872 0.08277705651361822 0.05402632630354748 203.84670865584067 3161876.9227313017 0.006534399176231589 0.016357261852341227 5.497588663790577e-07 6.259827757713515 -0.046382942964582785 LKEGLDISHLQGQEELLSSQEKS(ph)PGTK ddPTM_A549_MK2206_60min_R1 2 LKEGLDISHLQGQEELLSSQEKSPGTK 27 2 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LKEGLDISHLQGQEELLS(0.002)S(0.006)QEKS(0.918)PGT(0.074)K;LKEGLDISHLQGQEELLS(0.142)S(0.142)QEKS(0.7)PGT(0.017)K 179.85 6.9801e-50 17885300.0 3058.0 3159.0 2993.8 2629.9 3165.3 3115.3 2861.2 3004.5 4130.7 3620.2 4290.299999999999 True False 3574.115639078092 3319.7796068200582 3418.3658574332153 3274.2256180606973 2699.688563047555 3444.958978231223 3381.043004027315 3430.3970758953515 3195.1030453724507 2802.394305661906 3224.9001037437324 1.1082872411858466 1.0294209122838198 1.059991239252618 1.0152952068994956 0.837138663586364 1.0682374236126038 1.048417902961496 1.0637219651898864 0.9907603158508101 0.868986391984252 1.0 11.65503875618537 -5.348965006484952 1.1978501377292061 1.00065222736918 1.1374607083817805 0.1815503318573105 0.07243566313973283 1.611710204531117 2.112274663150724 0.008679669734080296 0.26200913008693877 4.477493803737535e-06 5.348965006484952 0.13680848101260046 LKEGLDISHLQGQEELLSSQEKS(ph)PGTK ddPTM_A549_PD325901_60min_R1 1 LKEGLDISHLQGQEELLSSQEKSPGTK 27 2 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LKEGLDISHLQGQEELLS(0.034)S(0.246)QEKS(0.713)PGT(0.007)K 158.31 1.7096e-41 20694000.0 2069.6 2074.4 2270.9 2502.6 2699.3 1881.5 2378.0 2699.0 2565.7 2518.2 2632.6 True False 2279.7042684410058 2249.216968107433 2425.016930031044 2657.179918183022 2509.710480079467 1866.1776878093376 2468.4960912915317 2645.16632767546 2457.872551462089 2359.2004222412984 2308.806889426379 0.9873949522939082 0.9741901665349972 1.0503333739763474 1.150888768719499 1.0870161950629844 0.8082866074056926 1.0691652483351812 1.14568539265432 1.064563936775477 1.0218266555967528 1.0 11.172931794578906 LKENTNHDDS(ph)SRDSYSSDR ddPTM_A549_MK2206_60min_R1 1 LKENTNHDDSSRDSYSSDR 19 2 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 LKENTNHDDS(0.406)S(0.406)RDS(0.058)Y(0.001)S(0.064)S(0.064)DR 41.911 0.016426 7017800.0 1004.3 790.19 759.11 697.65 1005.0 649.56 698.52 704.98 1119.7 1455.9 1283.7 True False 1173.801287222409 830.4072958256228 866.7632126515231 868.5742813186984 857.1658313154502 718.2960080569679 825.432042210666 804.913073910703 866.0897377934806 1127.0111788335364 964.921861682361 1.2164728915726526 0.860595379586271 0.8982729556363286 0.9001498627094232 0.888326677375683 0.744408471380889 0.8554392588551246 0.83417435740063 0.8975749977137375 1.1679818061833207 1.0 9.914268309018029 -5.255759680976588 24.695227557054423 0.9097065994316965 1.2164730491483866 0.4358222552774239 0.10183354126104022 314.22747581831106 1366206.4295658122 0.011267291107679224 0.13661312513365542 5.54932702799136e-06 5.255759680976588 0.3067664497166901 LKENTNHDDS(ph)SRDSYSSDR ddPTM_A549_PD325901_60min_R1 1 LKENTNHDDSSRDSYSSDR 19 2 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 LKENTNHDDS(0.492)S(0.492)RDS(0.005)YS(0.005)S(0.006)DR 88.22200000000001 1.2993e-06 10213000.0 1827.9 2015.5 1775.1 1805.1 2287.9 1879.1 1856.4 1962.6 2125.8 2052.1 2107.1 True False 2013.4670623711413 2185.353258397865 1895.5689605434434 1916.5969273204569 2127.2057968265167 1863.797232613619 1927.0463178610587 1923.4544033700854 2036.4600186686328 1922.5300557864218 1847.9400580074162 1.0895737952356574 1.1825888231213908 1.0257740516688534 1.0371531906652165 1.151122725874683 1.0085810005240652 1.0428078061898505 1.040864066469826 1.10201627474026 1.0403638621587294 1.0 10.851702245194208 LKERPS(ph)SREDTPSR ddPTM_A549_MK2206_60min_R1 1 LKERPSSREDTPSR 14 3 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IS03;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 LKERPS(0.5)S(0.5)REDTPSR 47.568000000000005 0.0092473 10225000.0 750.36 568.7 672.07 554.8 649.67 742.63 676.2 687.06 971.38 937.15 1108.0 True False 877.0024234593317 597.6444008859033 767.379631840852 690.7260249059187 554.1044036126448 821.214613682102 799.0567871254266 784.4528590330041 751.3639809751108 725.4471641210582 832.8530207556719 1.0530098367940142 0.7175868802680732 0.9213866225094387 0.8293492461361344 0.6653087517289541 0.9860258571638367 0.9594211309943008 0.9418863106496835 0.9021567578555174 0.871038641923684 1.0 9.701918105609934 LKES(ph)SLKR ddPTM_A549_MK2206_60min_R1 1 LKESSLKR 8 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 LKES(0.883)S(0.117)LKR 42.001000000000005 0.017143000000000002 10090000.0 1689.3 1372.1 1589.2 1104.0 1714.3 1507.3 1406.2 1295.0 1884.4 1640.3 1610.7 True False 1974.4125405803206 1441.9340292870536 1814.5724566213069 1374.4800495604425 1462.1287409194772 1666.8014855352365 1661.6883378523733 1478.5702157711708 1457.5864087684517 1269.755090762174 1210.7187369414805 1.6307772237572573 1.190973580643238 1.4987564008510206 1.1352595839333055 1.2076535171274454 1.3767041300987155 1.3724808968019548 1.2212334464289676 1.2039017521531126 1.0487614109036019 1.0 10.241648034955077 -14.068795101805394 0.07226727359496274 1.32033019661307e-10 1.7152885926826176 0.49691829471361815 0.12842535442768452 88.38020004061073 0.5710794933703459 15.862933546520155 2.720080575842191 8.535026977978757e-15 14.068795101805394 1.7152885925505845 LKESS(ph)LK ddPTM_A549_MK2206_60min_R1 1 LKESSLK 7 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 LKES(0.119)S(0.881)LK 81.33800000000001 0.004311 14640000.0 3575.2 4376.6 4510.2 3794.0 5331.4 4127.2 4499.9 3684.3 5518.4 5595.1 5725.3 True False 4178.606354752122 4599.350246029969 5149.81417936913 4723.530170319134 4547.158122462874 4563.937564586368 5317.473582350937 4206.560807695538 4268.491211073987 4331.163024034287 4303.549999758525 0.9709673072199896 1.0687340094312932 1.1966432781443437 1.097589239252286 1.056606318671334 1.0605052955914196 1.2356016736529851 0.9774629800819256 0.9918535189119436 1.0064163363449505 1.0 12.071311515191837 LKESS(ph)LK ddPTM_A549_PD325901_60min_R1 2 LKESSLK 7 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 LKES(0.14)S(0.86)LK;LKES(0.216)S(0.784)LK 98.04799999999999 0.0032245 43365000.0 9248.0 8714.3 9941.9 9413.9 10839.0 9529.3 10686.1 10053.5 10614.7 10324.400000000001 11108.9 True False 10186.850151982224 9448.684643838511 10616.617119501354 9995.375222481887 10077.706032520035 9451.696540229339 11092.7653831583 9852.975055681824 10168.601072613577 9672.515622026871 9742.575725119166 1.0456013316599213 0.9698343549413817 1.089713584891997 1.025947911978855 1.0343985324678366 0.9701435027967135 1.1385865192259121 1.0113316368974188 1.0437282048930854 0.9928088726155179 1.0 13.250087524587764 -10.777386143837084 0.9711002934523201 0.9995136506630166 1.0364764169190932 0.10035175698374932 0.04580467908286628 1.192321303428876 1.9525990401164013 0.031085243604126293 0.007434329516709128 1.669605459457e-11 10.777386143837084 0.03696276625607664 LKET(ph)PEPVTK ddPTM_A549_PD325901_60min_R1 1 LKETPEPVTK 10 1 E9PFZ1;Q5JPI3-2;Q5JPI3 E9PFZ1 C3orf38 Uncharacterized protein C3orf38 1 LKET(0.974)PEPVT(0.026)K 50.675 0.010572 2319500.0 1864.5 1571.9 1432.3 1883.1 1936.4 1807.1 1979.7 1513.8 1878.9 1528.5 2089.0 True False 2053.7826674276444 1704.3695295835294 1529.5044911195835 1999.4148101696044 1800.3939442173444 1792.3835767420946 2055.038566833407 1483.6060714468736 1799.9363670507537 1431.990249144558 1832.0662432620625 1.121019873042804 0.9302990739837199 0.8348521767402054 1.0913441681069194 0.9827122522664222 0.9783399390355496 1.1217053828655965 0.8097993600958759 0.9824624921017592 0.7816258033305858 1.0 10.839255953543383 -6.294618717699875 24.996380140462588 0.9915818635931427 0.958880981200843 0.0 0.11556510295075118 2277.4161321235015 1715737.6527385062 0.012614760340190337 0.029315480735962157 5.074360085757469e-07 6.294618717699875 -0.032700882392299735 LKET(ph)RISFVEEDVHPK ddPTM_A549_PD325901_60min_R1 1 LKETRISFVEEDVHPK 16 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LKET(0.565)RIS(0.435)FVEEDVHPK 68.567 0.0011937 3179400.0 544.16 411.11 536.21 667.35 682.88 787.06 765.22 695.26 814.08 600.05 749.97 True False 599.4027226105802 445.75568249067027 572.6004350926706 708.5706938381845 634.9168646081081 780.6504443089117 794.3408658444511 681.3924938790814 779.8670486394586 562.162740594826 657.7284444515316 0.9113224882807248 0.6777199408828642 0.8705727111591658 1.0772997576971899 0.9653176321689331 1.1868886785942223 1.2077033805445927 1.0359784492022126 1.1856976161184216 0.8547034043260876 1.0 9.361348252903696 -6.198870258615468 2.9024109950130583 1.0936223382551264 0.7887810083889525 0.467441033140913 0.11444873100257975 0.1292493569272144 2.1320643255873484 0.01376824038266428 0.04085742835519555 6.326008066811164e-07 6.198870258615468 -0.30484132986617396 LKETCVSGEDPTQGADLS(ph)PDEK ddPTM_A549_MK2206_60min_R1 4 LKETCVSGEDPTQGADLSPDEK 22 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK 162.07 1.9296999999999998e-33 73751500.0 6159.9 6956.2 5995.49 6441.900000000001 8007.799999999999 7020.5 6025.1 7283.1 9713.4 8811.1 8971.4 True False 7199.540524904233 7310.240867667514 6845.740635507478 8020.165789187882 6829.863227868512 7763.404650169261 7119.782679842365 8315.501728558307 7513.330409112442 6820.666390425284 6743.55378195617 1.067618166576821 1.0840338942988248 1.015153264414489 1.1893084934901184 1.0127988073800616 1.1512334447367978 1.0557908945418182 1.2331037902905473 1.1141499945052675 1.0114350105244871 1.0 12.719293361591983 -10.631903546331934 1.0427842065871589 1.0032738270747636 1.1025533521007673 0.24462118341448225 0.06521662367739098 0.5203991417825614 1.054944524589096 0.035030786294110876 0.010790950257563997 2.3339763640183994e-11 10.631903546331934 0.09927952502600368 LKETCVSGEDPTQGADLS(ph)PDEK ddPTM_A549_PD325901_60min_R1 2 LKETCVSGEDPTQGADLSPDEK 22 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK 239.78 1.7302999999999996e-98 148041000.0 6329.6 7383.3 7017.6 6505.4 7222.3 6471.9 7384.799999999999 7140.8 5599.4 6803.200000000001 7962.3 True False 6972.176332394756 8005.516602693605 7493.856536256925 6907.223783164644 6715.030563582383 6419.194992151607 7665.832605117619 6998.371142150771 5364.07669043802 6373.644790958623 6982.987577178327 0.9984517737337949 1.1464314541897638 1.0731590817586745 0.9891502321640536 0.9616271673643418 0.9192619808075706 1.0977869458297411 1.002203006206501 0.7681635734207515 0.9127389560005595 1.0 12.769628690814118 -7.087017184362371 0.6414845125341522 0.9021427229817445 1.0827219250642393 0.23687748681892973 0.085053119296895 0.8730831146287129 0.6576094773414427 0.021883591339948598 0.07507191508087589 8.184324033870304e-08 7.087017184362371 0.18057920208249478 LKETRIS(ph)FVEEDVHPK ddPTM_A549_PD325901_60min_R1 1 LKETRISFVEEDVHPK 16 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LKET(0.137)RIS(0.863)FVEEDVHPK 68.567 0.0004937 2748000.0 430.1 634.54 517.19 594.03 599.51 714.67 681.99 738.26 545.98 583.91 950.99 True False 473.76343537711483 688.0149127183236 552.2896235161194 630.7218839599861 557.4024857972217 708.8499644680832 707.943502649248 723.5348251462343 523.0343592965945 547.0418229492956 834.0242588223024 0.5680451502047438 0.8249339338040914 0.6621985124221554 0.7562392547797199 0.6683288644197365 0.8499152836022136 0.8488284305409908 0.8675225180714929 0.6271212782649197 0.6559063686250025 1.0 9.703945536962221 -10.971822647674577 1.1832401542636126 1.0030422748783339 0.7380460211396626 0.0 0.13874815097028764 0.3335105461199271 0.814450806659142 0.07333749920491361 0.016131039666579063 1.0670317747780858e-11 10.971822647674577 -0.2649962537386713 LKEY(ph)TIK ddPTM_A549_PD325901_60min_R1 1 LKEYTIK 7 1 O43293;O43293-2 O43293 DAPK3 Death-associated protein kinase 3 1 LKEY(0.846)T(0.154)IK 51.854 0.040925 4539900.0 2799.6 2780.1 2867.5 3171.2 3640.5 3098.2 2699.7 3397.0 3815.8 3374.4 3131.6 True False 3083.813331043408 3014.388783761798 3062.1057936782854 3367.0778216822514 3384.8038390431957 3072.9692864049352 2802.438560832523 3329.2441701050516 3655.435195801944 3161.3398081212927 2746.4330528480027 1.1228430737991404 1.0975649963999414 1.1149391719208068 1.2259821218619005 1.2324363179117779 1.1188946634684287 1.020392089268822 1.2122065624911862 1.3309755327956463 1.1510711338268518 1.0 11.42334340976031 -11.167992322369749 1.5824527678584988 1.0004269959584087 1.1855053182089277 0.0 0.09261579841227506 0.3759205903744976 1.6962212662256353 0.07139893938594404 0.01527220216201304 6.792156399547579e-12 11.167992322369749 0.185078322250519 LKEYT(ph)IK ddPTM_A549_MK2206_60min_R1 2 LKEYTIK 7 1 O43293;O43293-2 O43293 DAPK3 Death-associated protein kinase 3 1 LKEYT(1)IK;LKEYT(1)IK 90.10799999999999 0.0049783 45634000.0 8809.2 10020.2 12159.2 11672.9 17493.0 13611.599999999999 12504.0 12576.099999999999 19643.1 14600.6 15155.5 True False 10295.97759573797 10530.185380265382 13883.557396520138 14532.761024016387 14919.802872836979 15051.970477351168 14775.814945602371 14358.800687690979 15193.969213585011 11302.314319442901 11391.97107947887 0.9037924625954162 0.9243514846376427 1.2187142417811727 1.275702064429854 1.3096770320733198 1.3212788526531025 1.297037610306003 1.260431630971787 1.3337436610030495 0.9921298290339349 1.0 13.47572976843608 -5.7543136245634745 9.166753408455342 1.2087127382626435 0.913247101948691 0.5171532838175089 0.11450863997227761 0.09972461555930712 79.35455109365307 0.01935519467357958 0.06907126319844817 1.7607040995862921e-06 5.7543136245634745 -0.2954656363139525 LKEYT(ph)IK ddPTM_A549_PD325901_60min_R1 3 LKEYTIK 7 1 O43293;O43293-2 O43293 DAPK3 Death-associated protein kinase 3 1 LKEY(0.359)T(0.641)IK;LKEYT(1)IK;LKEYT(1)IK 96.89 0.0046375 56706100.0 18262.5 20353.300000000003 22309.1 19437.6 22926.9 22128.4 20870.7 22416.1 23580.7 25022.0 24845.300000000003 True False 20116.49555585807 22068.54402091257 23823.129681516395 20638.216406007476 21316.59363751118 21948.19364704764 21664.94590938526 21968.993300409744 22589.68518309314 23442.106649718753 21789.485607333158 0.9232203053516761 1.0128070216345766 1.0933314402566172 0.9471640027638731 0.978297240313795 1.0072836983201232 0.9942844131251091 1.0082382712612625 1.0367241150241142 1.0758448855639535 1.0 14.411344518155214 -8.519118363577409 22.880753223321346 1.017612427871688 0.9968060827720495 0.1118563283285815 0.044698553216698834 136.9265760594991 833168.683137809 0.006924778045362886 0.00795083498360048 3.026088578837703e-09 8.519118363577409 -0.020806345099638524 LKFDFQAQS(ph)PK ddPTM_A549_MK2206_60min_R1 1 LKFDFQAQSPK 11 1 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 LKFDFQAQS(1)PK 84.566 0.00014139 4296700.0 1712.0 1622.8 1797.6 1617.4 2325.2 2009.9 1660.5 1504.9 2657.9 2544.2 2886.7 True False 2000.943745618604 1705.3935884607754 2052.526710308621 2013.663072607846 1983.1661601738156 2222.5862839363585 1962.1913561398549 1718.2241835629611 2055.8898937941353 1969.4634529763591 2169.85272113303 0.9221564791613013 0.785949005594385 0.9459290440859299 0.9280183180157837 0.9139634874104576 1.0243028304592916 0.9042970230326319 0.791862123557288 0.9474790034231508 0.9076484471941331 1.0 11.083381407653576 -14.999999999999998 0.11414861226770424 1.325817952083843 0.8570993512198118 0.0 0.07143434629339523 95.23720452282356 0.7646990205680035 7.0601636172795335 0.3008115146034868 1.000000000000004e-15 14.999999999999998 -0.46871860086403105 LKFDFQAQS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LKFDFQAQSPK 11 1 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 LKFDFQAQS(1)PK;LKFDFQAQS(1)PK 100.45 7.444e-05 18585700.0 8627.8 7920.2 8355.6 9028.7 9697.400000000001 8209.2 8742.8 9622.3 9807.7 9171.4 10072.5 True False 9503.687904549337 8587.66304994432 8922.661262304542 9586.382293334558 9016.288078213845 8142.34699695159 9075.512038243727 9430.37567795168 9395.516476195477 8592.316238799083 8833.646354838262 1.07585107245595 0.9721538201765102 1.0100768022502424 1.08521236964439 1.0206756888423034 0.921742468498522 1.027380050512549 1.0675518691991315 1.0636056843105874 0.9726805776068905 1.0 13.108793361512236 -7.986522554666663 24.961772438202846 1.03434500613444 1.0122657599072664 0.0032690035496946157 0.048789172154774324 668.330410782203 1237824.0480081306 0.0075420486435205545 0.010418392439909505 1.0315195070738565e-08 7.986522554666663 -0.0220792462271735 LKFGT(ph)FGGLGSK ddPTM_A549_MK2206_60min_R1 2 LKFGTFGGLGSK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKFGT(0.999)FGGLGS(0.001)K;LKFGT(0.981)FGGLGS(0.019)K 108.56 4.4553e-05 54883000.0 12210.3 13736.7 13491.7 13371.2 21069.9 13666.2 13175.5 12930.2 24423.0 22743.2 22699.8 True False 14271.100126826432 14435.839355810407 15405.025933172474 16647.144600255975 17970.54562112775 15112.348213110621 15569.317803565587 14763.095447076757 18891.229495516814 17605.495324161602 17062.813177391326 0.8363861210023686 0.8460409901772981 0.9028420913372325 0.9756389188105205 1.05319945980181 0.8856891332042993 0.9124707421748801 0.8652204823198935 1.1071579638783238 1.0318049632922983 1.0 14.058567905600865 -3.9139728198150157 0.24228405559260185 1.0485554009315123 0.43398248904867753 0.3260516799655936 0.07163973017982117 14.565685695690991 0.3883014715890179 0.047065251885392206 3.0137380767671003 0.00012190658913968743 3.9139728198150157 -0.6145729118828348 LKFGT(ph)FGGLGSK ddPTM_A549_PD325901_60min_R1 2 LKFGTFGGLGSK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKFGT(0.997)FGGLGS(0.003)K;LKFGT(0.629)FGGLGS(0.371)K 125.52 1.4550999999999998e-06 180970000.0 23841.0 23325.0 29229.0 28695.0 28828.0 34988.0 32692.0 34918.0 29994.0 26297.0 27055.0 True False 26261.320769183407 25290.679609094608 31212.655708255494 30467.42497892666 26803.220731201014 34703.06932823443 33936.111949748825 34221.53309735891 28733.45648694465 24636.6029321259 23727.406515775543 1.1067927188638653 1.065884701401297 1.3154684936806416 1.2840604791202068 1.1296312858036326 1.4625732190815521 1.4302495271527405 1.4422787030940856 1.2109817593355918 1.0383184068493059 1.0 14.534266797346088 -9.959334953648517 1.013173821811841 1.0280141925381874 1.275764901028877 0.35287878329479716 0.13095241831688792 0.3918864603522731 0.8157107054266969 0.04968289718898902 0.027238400333860685 1.098158547765152e-10 9.959334953648517 0.2477507084906896 LKFS(ph)DDEEEEEVVK ddPTM_A549_MK2206_60min_R1 4 LKFSDDEEEEEVVK 14 1 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK 164.09 1.4552999999999998e-19 105337100.0 7053.07 9252.759999999998 8168.2 6816.69 10347.099999999999 7574.6 8040.1 7913.9 10765.800000000001 10766.300000000001 13304.899999999998 True False 8243.455784994285 9723.685962266649 9326.573584302898 8486.77935601284 8825.055296720491 8376.139144387455 9500.88209725989 9035.719560302286 8327.363489449906 8334.185352479906 10000.92613344056 0.824269240168694 0.9722785502587715 0.9325709899123443 0.8485993439782744 0.8824238054525515 0.8375363473968446 0.9500002270281099 0.9034882809592136 0.8326592335889088 0.8333413567182048 1.0 13.287845986174856 -10.982870523251144 1.2405985374505233 1.0003208627144808 0.8847407830107424 0.0 0.06772486568133673 0.3533353706532363 0.9630352385124257 0.03465762531301084 0.007869030234827155 1.0402302447288825e-11 10.982870523251144 -0.1155800797037384 LKFS(ph)DDEEEEEVVK ddPTM_A549_PD325901_60min_R1 4 LKFSDDEEEEEVVK 14 1 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK 247.61 3.1086999999999995e-59 416510000.0 42952.0 40359.0 40865.1 42140.2 48684.200000000004 36730.6 43434.5 40585.1 44374.799999999996 40886.7 43127.2 True False 47312.45542040879 43760.1945699228 43638.45142780907 44743.10444666195 45264.7897433723 36431.478171591596 45087.4236657704 39775.59834210495 42509.881473523776 38305.10678423211 37822.827805845685 1.250896830434673 1.156978393962375 1.1537596197676303 1.1829656068113106 1.196758475482799 0.9632140240439915 1.1920690831794958 1.0516294166656006 1.1239212914417172 1.0127510026712463 1.0 15.206969609282375 -2.0000043582510325 0.018140985047268073 6.548328457368488e-13 2.5554189674171766 0.5006509212775225 0.06383113840236068 1782.200129856258 2.425231932647608 129.38509849790336 224.60180390621403 0.00999989964806494 2.0000043582510325 2.5554189674165215 LKFS(ph)DDEEEEEVVKDGR ddPTM_A549_PD325901_60min_R1 1 LKFSDDEEEEEVVKDGR 17 2 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVKDGR 58.92 0.0011017000000000002 12145000.0 1904.2 2452.1 1984.2 1945.3 2424.6 1908.0 2153.3 2086.7 1854.9 2219.4 2589.4 True False 2097.5129822020504 2658.7470726456986 2118.8597439638884 2065.4567629031535 2254.304460415913 1892.461880595383 2235.245009830972 2045.0791315155186 1776.945003588506 2079.2667052348274 2270.920215559017 0.9236401031754081 1.1707796048621695 0.933040152378186 0.9095241430112128 0.992683250151519 0.8333458250225355 0.9842904187106093 0.9005508504895208 0.7824779538329522 0.9156053528384257 1.0 11.149061305264654 -5.974324971816898 24.0186994441102 0.90515898235594 1.0483851200160208 0.2704319707094456 0.08191792452158596 141.65313119904093 132512.1968130823 0.012921551385736007 0.040172428211289184 1.060901413834283e-06 5.974324971816898 0.14322613766008085 LKFS(ph)DDEEEEEVVKDGRPK ddPTM_A549_MK2206_60min_R1 4 LKFSDDEEEEEVVKDGRPK 19 3 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK 146.06 2.9279000000000002e-21 231480900.0 7218.799999999999 9920.5 8622.2 7789.3 11663.0 8555.6 8491.2 7900.0 12986.100000000002 11962.699999999999 12474.5 True False 8437.156957284802 10425.411076118518 9844.957611049727 9697.678849674967 9947.388149882678 9460.947913252352 10033.941128126911 9019.849192735324 10044.769084540432 9260.317761544024 9376.737371314637 0.8997966588139491 1.1118378027747677 1.0499342384449704 1.0342274146807349 1.0608581381743483 1.0089807934895705 1.07008874524126 0.9619389810712725 1.0712435132575475 0.9875842091806085 1.0 13.19487031006538 -11.200098507235705 1.6350295482683257 0.9999903027280469 1.0384886764233925 0.03749614582893557 0.05581849574751548 0.9067811799160319 4.359993559407347 0.036999046824937994 0.007715742711514359 6.308142461493027e-12 11.200098507235705 0.03849837369534559 LKFS(ph)DDEEEEEVVKDGRPK ddPTM_A549_PD325901_60min_R1 2 LKFSDDEEEEEVVKDGRPK 19 3 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK 168.65 9.2832e-35 473940000.0 7897.799999999999 8723.6 9241.6 9650.5 9896.3 9671.3 9578.8 10557.0 10355.7 9878.1 10976.2 True False 8699.57884194693 9458.768387476863 9868.790550255357 10246.589467124299 9201.218028381598 9592.540139309294 9943.326475720485 10346.432353193717 9920.485941916811 9254.395080192911 9626.196983864553 0.9037399563430063 0.9826069841840621 1.0252013922837273 1.0644483469743709 0.9558518326401064 0.9965036197979665 1.0329444216015427 1.0748203439568527 1.03057167420795 0.9613760341394575 1.0 13.232750230584527 -7.65681983692456 6.413604437329426 1.0215129199933457 0.9911331573859131 0.10746412688232976 0.04535898370759055 0.40727445000284346 22.136788322087103 0.006655706986587236 0.00988813421366889 2.2038405164359737e-08 7.65681983692456 -0.03037976260743258 LKFS(ph)DEEDGRDS(ph)DEEGAEGHR ddPTM_A549_PD325901_60min_R1 5 LKFSDEEDGRDSDEEGAEGHR 21 2 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 2 LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR 128.3 8.8621e-18 113683000.0 24117.2 25255.0 25730.6 24439.4 27925.2 24929.4 24432.6 24981.3 26091.4 26995.3 28557.5 True False 26565.560389855742 27383.32748243022 27476.833246667302 25948.9662320955 25963.830288710084 24726.38323171624 25362.39596303173 24483.028374049274 24994.869193287577 25290.812150953276 25045.10854090778 1.0607085350205017 1.0933603037776132 1.0970937978482957 1.0360891904186158 1.0366826818219492 0.9872739497746259 1.0126686383333379 0.9775572876459919 0.9979940455223765 1.0098104430110244 1.0 14.612241243534566 -6.70635571336251 1.505246488243922 0.9976988090943312 1.0845932270861953 0.842847468493997 0.015450764860526548 0.09311654690582837 0.4223146078676695 0.00207414061827078 0.005555977054658942 1.9662751321074647e-07 6.70635571336251 0.08689441799186415 LKGDDLQAIKK ddPTM_A549_MK2206_60min_R1 2 LKGDDLQAIKK 11 2 G3V4C1;G3V2Q1;G3V576;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 63.76 0.0021866999999999998 9679900.0 5910.0 6315.6 6250.700000000001 6485.1 8541.3 5878.5 6646.8 6136.200000000001 9693.5 9079.9 8976.9 False True 6907.463514372637 6637.037063891349 7137.143251071482 8073.949791127198 7284.886084591688 6500.558968167508 7854.437522427216 7006.025141324365 7497.937727338669 7028.744283735576 6747.687980163891 1.0236785599272575 0.9836016548782603 1.0577168464298392 1.1965505540360055 1.0796121732372619 0.9633757499275507 1.1640190752027695 1.0382852855555718 1.111186194349869 1.0416522376846564 1.0 12.720177548169348 -5.831198260541096 7.116869784294467 1.0658386365391932 1.0039275078932708 0.13841646852579237 0.06465861745388035 0.3408274327453145 28.495201324513427 0.009423905720347915 0.029875084769350753 1.4750330096270499e-06 5.831198260541096 -0.06191112864592241 LKGDDLQAIKK ddPTM_A549_PD325901_60min_R1 2 LKGDDLQAIKK 11 2 G3V4C1;G3V2Q1;G3V576;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 115.14 7.1751e-06 23720000.0 8987.0 7957.200000000001 9906.1 8891.400000000001 10599.7 10822.900000000001 11094.9 10617.7 10111.099999999999 9993.5 10144.2 False True 9899.353624120276 8627.781169795833 10578.387516218465 9440.601584165486 9855.213638979854 10734.761890721067 11517.122490862235 10405.921644075492 9686.1656292974 9362.508704498618 8896.52770938201 1.1127210466259456 0.9697919740863883 1.1890467676577703 1.0611557556561886 1.107759562035292 1.2066237796798531 1.2945637744393945 1.1696610165224035 1.0887579902755389 1.052377850138678 1.0 13.119026650638137 -9.624844393252944 1.1732887749328313 1.0185684148687015 1.135802127710478 0.2098178179496325 0.08083898962151469 0.42175775996589904 1.1932837837788217 0.02339313224922782 0.016639362932874612 2.3722235158202434e-10 9.624844393252944 0.11723371284177642 LKGDNEKHS(ph)PR ddPTM_A549_MK2206_60min_R1 1 LKGDNEKHSPR 11 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 LKGDNEKHS(1)PR 65.472 0.0011627 28731000.0 2965.3 3262.7 2868.6 2080.8 3882.1 3124.7 3021.2 3172.6 4062.7 4300.1 3973.5 True False 3465.7701453754953 3428.757493881548 3275.4106148149253 2590.596093410661 3311.048232586773 3455.35367999201 3570.112932953766 3622.3257656800124 3142.504936798763 3328.7044234508494 2986.7702869789346 1.160373852815129 1.147981653905388 1.0966396140655146 0.8673569925027623 1.1085714381924696 1.1568863179923485 1.1953088419681823 1.2127902107074766 1.052141488918236 1.1144829041465305 1.0 11.544370568651523 -8.9724327214342 11.50141664168005 1.0229564047061868 1.114864726796718 0.06297274132466457 0.09121943121699114 0.7310530369185598 300.9416484321525 0.01642438442996086 0.01711322208940279 1.06553391766741e-09 8.9724327214342 0.09190832209053124 LKGDNEKHS(ph)PR ddPTM_A549_PD325901_60min_R1 6 LKGDNEKHSPR 11 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 LKGDNEKHS(1)PR;LKGDNEKHS(1)PR;LKGDNEKHS(1)PR;LKGDNEKHS(1)PR;LKGDNEKHS(1)PR;LKGDNEKHS(1)PR 72.417 0.00040978 111314300.0 14166.31 13038.570000000002 12255.800000000001 12008.099999999999 15869.56 14644.69 14060.18 14590.65 13753.61 14286.960000000001 14679.369999999999 True False 15604.463362513769 14137.37605276539 13087.552288112405 12749.813064626205 14754.936852609897 14525.428500071488 14595.24784392571 14299.628039606503 13175.593601167135 13384.878907372162 12873.90055019331 1.2121006606874447 1.0981424004050668 1.0165957269194446 0.9903613139558359 1.1461123841280834 1.1282849703117661 1.133708295090609 1.1107455727077047 1.023434471145522 1.0396910287745837 1.0 13.65216160885404 -8.827077320023415 4.7234030725193215 1.0102239656805618 1.1007552394569162 0.28771145421483146 0.057780353219884575 0.18146871776814777 7.771746607471888 0.010527014578509717 0.011216364508318625 1.4890959415240011e-09 8.827077320023415 0.09053127377635439 LKGDRGEVDSNGS(ph)DGGEASR ddPTM_A549_MK2206_60min_R1 2 LKGDRGEVDSNGSDGGEASR 20 2 Q7LBC6 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 LKGDRGEVDS(0.16)NGS(0.838)DGGEAS(0.001)R;LKGDRGEVDS(0.175)NGS(0.824)DGGEAS(0.001)R 58.015 0.0015855 5424100.0 1132.47 1194.58 1000.8900000000001 998.76 1290.7399999999998 1094.13 1009.61 1213.83 1573.5 2072.0 1891.94 True False 1323.603249766764 1255.379019536279 1142.831252270136 1243.4562448360398 1100.873855832939 1209.9101103752869 1193.043068396483 1385.8941196984715 1217.1047623631712 1603.933760933504 1422.119083112351 0.9307260309523573 0.882752390038142 0.8036115019067285 0.8743685810858384 0.7741080679570398 0.8507797446380944 0.8389192456270763 0.97452747534011 0.8558388512018981 1.127847716819358 1.0 10.473826560746321 -11.183639811421298 0.40923626030743077 1.0671816644942589 0.8536796522661282 0.5590372270231325 0.06413069645049495 1.9654446068785627 0.32260201000910693 0.18717145283016803 0.014652384605872754 6.551793315075965e-12 11.183639811421298 -0.2135020122281307 LKGDRGEVDSNGS(ph)DGGEASR ddPTM_A549_PD325901_60min_R1 2 LKGDRGEVDSNGSDGGEASR 20 2 Q7LBC6 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 LKGDRGEVDS(0.151)NGS(0.847)DGGEAS(0.002)R;LKGDRGEVDS(0.192)NGS(0.808)DGGEASR 99.064 1.5237e-07 15562800.0 1373.37 1399.71 1513.86 1437.6599999999999 1514.7 1736.0 1370.06 1821.23 1666.85 1717.73 1392.11 True False 1512.7935113784413 1517.6684739826726 1616.5996431797073 1526.4609930372428 1408.3126974313234 1721.8625915689647 1422.198383025599 1784.9041389227045 1596.7980911270151 1609.272234650364 1220.8892953123752 1.2390914697891424 1.2430844301852642 1.3241164857343484 1.2502861634532427 1.153513838509817 1.410334743846215 1.1648872575803173 1.4619705044313793 1.3078975278577247 1.3181147879903539 1.0 10.253716673894324 -10.633430511892014 0.919190004149085 1.0006649120006053 1.2836716658959255 0.0 0.12760518519533953 0.306125949416474 0.46304196353071914 0.056537366464843086 0.015435220853683722 2.3257845869444714e-11 10.633430511892014 0.28300675389532026 LKGEATVSFDDPPSAK ddPTM_A549_MK2206_60min_R1 1 LKGEATVSFDDPPSAK 16 1 H3BPE7;P35637-2;P35637 H3BPE7 FUS RNA-binding protein FUS 0 58.577 0.030306 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LKGKGS(ph)PRPQAPK ddPTM_A549_MK2206_60min_R1 4 LKGKGSPRPQAPK 13 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 LKGKGS(1)PRPQAPK;LKGKGS(1)PRPQAPK;LKGKGS(1)PRPQAPK;LKGKGS(1)PRPQAPK 55.173 0.0032018 35906500.0 6955.699999999999 8256.2 8792.3 7638.5 11788.1 7475.7 6877.0 7020.700000000001 12818.3 12875.3 12762.1 True False 8129.652109462224 8676.40531491857 10039.18034882426 9509.932842905298 10054.086105601647 8266.77361203196 8126.461882670155 8015.905724992016 9914.9755166189 9966.760787715795 9592.918353958448 0.84746391134535 0.9044594142030109 1.046519940898034 0.9913492945534237 1.0480737701111469 0.8617579454974446 0.847131350734037 0.8356065828168245 1.0335723865019197 1.0389706677325241 1.0 13.227754062813869 -8.805641181389852 24.99932368640437 1.015853665689604 0.9282124080945376 0.26782477511553615 0.07391648455364755 154.68660523106675 87485.8153301982 0.01374324514756292 0.014630833269508408 1.5644396651208743e-09 8.805641181389852 -0.08764125759506636 LKGKGS(ph)PRPQAPK ddPTM_A549_PD325901_60min_R1 2 LKGKGSPRPQAPK 13 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 LKGKGS(1)PRPQAPK;LKGKGS(1)PRPQAPK 66.24600000000001 0.0014769 21051100.0 5746.700000000001 5220.0 6097.9 5717.799999999999 6998.299999999999 7093.1 6412.299999999999 6848.4 6636.6 6732.299999999999 6879.9 True False 6330.100753503057 5659.9077195915925 6511.74016365155 6070.97551993402 6506.763550824336 7035.336145309807 6656.323585445198 6711.803289534128 6357.68678139818 6307.221429058492 6033.7159152793965 1.0491214439634313 0.9380467690331267 1.079225514605624 1.0061752335008463 1.0784007139525782 1.1660038762338762 1.1031880981650377 1.1123830461652306 1.0536934238647828 1.0453295311909676 1.0 12.558831056508675 -4.876822056649866 20.220724727936343 1.0446863132082673 2.4234027341248066 0.0 0.06029200072515594 27824.730601446074 3518850.9878376457 0.008742584769633464 408815.82024605956 1.327938442105545e-05 4.876822056649866 1.3787164209165392 LKGMKDDKEEEEDGT(ph)GSPQLNNR ddPTM_A549_MK2206_60min_R1 2 LKGMKDDKEEEEDGTGSPQLNNR 23 3 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 LKGMKDDKEEEEDGT(0.5)GS(0.5)PQLNNR;LKGMKDDKEEEEDGT(0.562)GS(0.438)PQLNNR 77.322 2.1552e-05 15532200.0 1946.7799999999997 2681.0 2669.5 2172.23 3619.5 2544.0 2536.5 2221.4700000000003 3938.2 4060.9 4117.6 True False 2275.348869798707 2817.451448523132 3048.0752409706643 2704.426447515109 3087.0763447226554 2813.2043914294704 2997.3492170121917 2536.3701754665494 3046.2039880131174 3143.5398695824633 3095.086280021257 0.7351487693529111 0.9102981932070022 0.9848110731665064 0.873780632537499 0.9974120478158216 0.9089259997657155 0.9684218615681388 0.8194828660637951 0.9842064848648406 1.0156550044740185 1.0 11.595763911879917 -4.582366695002441 1.1872310178082308 0.9675541465525944 3.157834627484404e-10 0.49729371137357015 0.059812348768233145 3.6945102219691295 1.3458948176692025 0.008774703299424928 6.559383465721426 2.6159732877163502e-05 4.582366695002441 -0.9675541462368109 LKGMKDDKEEEEDGTGS(ph)PQLNNR ddPTM_A549_MK2206_60min_R1 1 LKGMKDDKEEEEDGTGSPQLNNR 23 3 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 LKGMKDDKEEEEDGT(0.049)GS(0.951)PQLNNR 68.942 7.2366e-05 12030000.0 889.94 1155.7 1181.8 1223.9 1784.2 1295.8 1119.9 700.98 1761.6 1300.7 1685.7 True False 1040.14011505597 1214.5201936061862 1349.3970105934177 1523.7555549429594 1521.7465435154481 1432.9206959175735 1323.3713337795984 800.3460616612167 1362.6004126971468 1006.8709666246173 1267.0941670467828 0.8208861993897623 0.9585082349774123 1.0649540071188697 1.2025590477575772 1.200973521219961 1.1308715115130572 1.0444143523002563 0.6316389755992515 1.0753742287938712 0.7946299437012895 1.0 10.30730803035874 LKGMKDDKEEEEDGTGS(ph)PQLNNR ddPTM_A549_PD325901_60min_R1 1 LKGMKDDKEEEEDGTGSPQLNNR 23 3 P49407-2;P49407 P49407-2 ARRB1 Beta-arrestin-1 1 LKGMKDDKEEEEDGT(0.15)GS(0.85)PQLNNR 57.688 0.00052801 20969000.0 885.58 979.66 744.27 1292.7 1194.5 1718.5 1251.4 1580.4 1515.3 1381.7 1222.2 True False 975.4834296704611 1062.2193863170685 794.7806378590883 1372.547143065289 1110.6024408012913 1704.50510576686 1299.0227117923553 1548.8776822001846 1451.6172105976946 1294.459226197602 1071.8771481641418 0.9100701804691153 0.9909898612321247 0.7414848233497181 1.280507887882599 1.0361284804918887 1.5902056580702855 1.2119138037575081 1.4450141836245187 1.3542757330762698 1.2076563330179095 1.0 10.065923847275956 -6.27129256266779 24.892970915710034 1.2205631351361101 0.8918624434653591 0.48599673529059895 0.17166647612772679 518.2633838204309 1309335.1180639586 0.027872273261602937 0.06550207418124218 5.354358394068158e-07 6.27129256266779 -0.328700691670751 LKGNKHDDGT(ph)QSDSENAGAHR ddPTM_A549_PD325901_60min_R1 2 LKGNKHDDGTQSDSENAGAHR 21 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LKGNKHDDGT(0.493)QS(0.493)DS(0.013)ENAGAHR;LKGNKHDDGT(0.495)QS(0.495)DS(0.011)ENAGAHR 48.983999999999995 0.0047666 3075400.0 102.93 274.69 287.34000000000003 204.81 0.0 346.23 341.58 499.15999999999997 238.42000000000002 280.423 481.46000000000004 True False 113.37937782693886 297.83909032463885 306.84062031578674 217.46064854274155 0.0 343.41041767219053 354.579013819748 489.20386221655525 228.40003652788383 262.7170439227115 422.2434722264018 0.26851659121954696 0.7053728711404238 0.7266912113475197 0.5150124580875505 0.0 0.8132995303905091 0.839750137403254 1.1585824160574592 0.5409202309832715 0.6221932633735208 1.0 8.721931309285946 -7.4411232670712275 24.999999604689947 0.816166253334878 0.470357071892878 0.3819651295660268 0.2430665634031279 97.35671534293857 29769.77888042295 0.03947632617638466 0.06310726393287504 3.6214019651843904e-08 7.4411232670712275 -0.345809181442 LKGNKHDDGT(ph)QSDSENAGAHRR ddPTM_A549_MK2206_60min_R1 1 LKGNKHDDGTQSDSENAGAHRR 22 3 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LKGNKHDDGT(0.546)QS(0.438)DS(0.015)ENAGAHRR 57.00899999999999 0.001004 4177800.0 543.69 421.85 423.5 207.08 593.48 538.8 464.55 273.13 717.31 606.81 1004.3 True False 635.4515800557118 443.3203631329666 483.5586681217741 257.81460929617424 506.1798781782021 595.8154583735059 548.9527217674012 311.8470139255442 554.8404303086912 469.7311995521518 754.9045927300729 0.8417640933374567 0.5872534985245245 0.640556002412185 0.3415194605768674 0.6705216567137697 0.7892592840358416 0.7271815896392184 0.4130946041774178 0.734980864670779 0.6222391598564708 1.0 9.560150513294902 -9.955723453130743 0.6870370982022387 0.9911466675170212 0.6229789887467485 0.0 0.17907448385996547 0.428824166307102 0.4098093495294584 0.07569469360297285 0.03190549407846126 1.1073286761952396e-10 9.955723453130743 -0.3681676787702727 LKGNKHDDGT(ph)QSDSENAGAHRR ddPTM_A549_PD325901_60min_R1 1 LKGNKHDDGTQSDSENAGAHRR 22 3 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LKGNKHDDGT(0.48)QS(0.48)DS(0.04)ENAGAHRR 41.521 0.017797999999999998 8990200.0 241.16 440.02 448.96 363.44 563.94 667.47 406.11 513.8 386.47 556.76 730.8 True False 265.642385667391 477.1020296503242 479.4291254157984 385.8888633678724 524.330799887384 662.034345618973 421.564738281919 503.55185593169773 370.2280098856273 521.6060785827441 640.9162329228895 0.4144728624767898 0.7444062190069786 0.7480371081090715 0.6020893894480276 0.8180956776460174 1.032949879580635 0.6577532548354703 0.7856749916213801 0.577654287514622 0.813844386814743 1.0 9.323992000216402 -10.977785491693892 1.228494326558695 1.0011263758750872 0.7073314402222125 0.1582479895442387 0.15769599064859816 0.4388415769090953 1.170635009719579 0.10875535352660402 0.024640296158667117 1.052481590988154e-11 10.977785491693892 -0.29379493565287473 LKGNKHDDGTQS(ph)DSENAGAHR ddPTM_A549_MK2206_60min_R1 1 LKGNKHDDGTQSDSENAGAHR 21 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LKGNKHDDGT(0.019)QS(0.747)DS(0.234)ENAGAHR 73.036 9.2582e-05 54454000.0 171.08 287.86 140.19 270.22 214.32 190.5 216.97 171.29 416.49 275.8 326.07 True False 199.95412149557873 302.51084445052925 160.07105002123143 336.42391213063684 182.79381190798728 210.65858355633418 256.3906404948295 195.57088205362453 322.1556799978626 213.49658844858106 245.0978199258139 0.8158135456125263 1.2342453496407806 0.6530904684084161 1.3726107895715494 0.7457994198533272 0.8594877898958719 1.046074749144785 0.7979299126888189 1.3143963503852159 0.8710668602160644 1.0 7.93721384168162 -8.758935048511784 24.998373346068774 1.1484649381259464 0.949548832455277 0.015238677050608551 0.22848542462372207 90.3706054904939 902083.3195768942 0.03566852093100782 0.039536921699402296 1.742067391113165e-09 8.758935048511784 -0.19891610567066942 LKGNKHDDGTQS(ph)DSENAGAHR ddPTM_A549_PD325901_60min_R1 1 LKGNKHDDGTQSDSENAGAHR 21 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LKGNKHDDGT(0.01)QS(0.894)DS(0.097)ENAGAHR 77.649 5.6156e-05 88042000.0 0.0 223.61 166.4 252.05 243.81 368.11 250.34 186.02 225.83 182.8 367.33 True False 0.0 242.45439945936332 177.69290464448707 267.61855605291714 226.6856266988386 365.1122342064815 259.86682569130454 182.30968517013312 216.33915044497942 171.25797680315685 322.15073869672267 0.0 0.7526116514282258 0.5515831047395788 0.830724638830821 0.703663221806993 1.1333583641110425 0.8066622064646168 0.565914223595067 0.6715463429330957 0.5316082076856001 1.0 8.331592092660335 -5.281543108804202 4.422111567779131 0.8103533904598867 4.8571111155006606e-37 0.5641997761698119 0.1852395429028547 0.09631139119922512 4.459668164821188 0.025402844239431965 0.23287297274600954 5.229460550966347e-06 5.281543108804202 -0.8103533904598867 LKGNKHDDGTQS(ph)DSENAGAHRR ddPTM_A549_MK2206_60min_R1 1 LKGNKHDDGTQSDSENAGAHRR 22 3 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LKGNKHDDGT(0.057)QS(0.867)DS(0.077)ENAGAHRR 58.812 0.00062751 5865700.0 498.33 609.4 527.78 262.5 753.18 707.04 490.83 316.93 901.1 1080.8 997.79 True False 582.4359210012381 640.4158570421475 602.6271401683827 326.8125117840728 642.3882197315128 781.8585035048326 580.0074575935713 361.85579805741867 697.0022887610122 836.6465293517999 750.0112053969324 0.7765696256404495 0.853875052044345 0.8034908489793178 0.435743505473511 0.856504829673229 1.0424624297326939 0.7733317228062091 0.482467189094744 0.9293225004446887 1.1155120394621532 1.0 9.550768339849673 -8.97440680046936 24.914538072383277 0.9688189462322698 0.7578291527014721 0.3218834180535114 0.1664355809839872 170.25823264212494 165745.14982219186 0.028638661651905213 0.02977451489919609 1.0607015403411577e-09 8.97440680046936 -0.21098979353079772 LKGNKHDDGTQS(ph)DSENAGAHRR ddPTM_A549_PD325901_60min_R1 1 LKGNKHDDGTQSDSENAGAHRR 22 3 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LKGNKHDDGT(0.049)QS(0.915)DS(0.036)ENAGAHRR 61.37 0.00033736 8065200.0 478.98 454.96 562.52 449.03 333.22 975.85 415.75 426.63 652.1 555.35 528.49 True False 527.6056969935607 493.3010758822588 600.6959899075532 476.7655632788792 309.8157767465936 967.9030011420369 431.5715937571294 418.12052996523965 624.6945047388348 520.2851062233759 463.4890803741349 1.13833468647777 1.0643208152478139 1.2960305114905035 1.028644650903161 0.6684424506754418 2.0882973129825024 0.9311364863412935 0.9021151687710245 1.3478084623581046 1.1225401595295286 1.0 8.856391539681285 LKGQVSQETLSEEAS(ph)SQATLPNQPVEK ddPTM_A549_MK2206_60min_R1 1 LKGQVSQETLSEEASSQATLPNQPVEK 27 1 Q9NVI1-1;Q9NVI1 Q9NVI1-1 FANCI Fanconi anemia group I protein 1 LKGQVSQETLS(0.001)EEAS(0.821)S(0.16)QAT(0.019)LPNQPVEK 144.55 3.8781999999999995e-33 4953900.0 438.6 464.04 529.05 653.22 886.03 539.05 404.38 473.45 795.7 641.1 690.45 True False 512.6249572595327 487.6576539249066 604.077245265229 813.25892932416 755.6961607168436 596.0919132075695 477.85061162049647 540.5629873798152 615.4752204717985 496.2750647367129 518.9922095494165 0.9877315070000534 0.9396242274008038 1.1639427994298457 1.5669964102741016 1.456083823248389 1.1485565722173172 0.9207279084889564 1.0415628162301824 1.185904545669669 0.9562283510335803 1.0 9.019569072618426 -7.521450482675584 24.99594572687534 1.0726956777306178 1.2309170084001575 0.19463876297828797 0.182869720485741 90.75347582298014 1588282.0372290385 0.030593484874333637 0.04573741179029412 3.009882329630749e-08 7.521450482675584 0.1582213306695397 LKGQVSQETLSEEAS(ph)SQATLPNQPVEK ddPTM_A549_PD325901_60min_R1 1 LKGQVSQETLSEEASSQATLPNQPVEK 27 1 Q9NVI1-1;Q9NVI1 Q9NVI1-1 FANCI Fanconi anemia group I protein 1 LKGQVSQETLSEEAS(0.882)S(0.117)QATLPNQPVEK 189.23 2.438e-58 6324600.0 925.38 845.33 1306.2 779.76 998.53 836.02 1132.1 1309.0 836.2 1170.1 1366.4 True False 1019.3238963712492 916.568925785893 1394.8465868186845 827.9240042365517 928.3966975414925 829.2117303015474 1175.18268500889 1282.8909681093658 801.0574219638304 1096.219686309485 1198.341462323257 0.8506122239942014 0.7648645687422982 1.1639809108452759 0.6908915616016765 0.7747346868409148 0.691966151862869 0.9806743085819059 1.0705554371975 0.6684717562979076 0.9147807371900613 1.0 10.226823341209403 -11.223424072532293 1.6866697345511645 1.0001171658741197 0.8260521507444668 0.037913480052788384 0.15724258443504335 0.6249325539260578 3.2015960531377896 0.1183488117844241 0.02439234286062748 5.978275534183535e-12 11.223424072532293 -0.1740650151296529 LKGQVSQETLSEEASS(ph)QATLPNQPVEK ddPTM_A549_MK2206_60min_R1 1 LKGQVSQETLSEEASSQATLPNQPVEK 27 1 Q9NVI1-1;Q9NVI1 Q9NVI1-1 FANCI Fanconi anemia group I protein 1 LKGQVSQETLS(0.011)EEAS(0.1)S(0.761)QAT(0.128)LPNQPVEK 92.675 1.7832999999999998e-09 4389400.0 359.24 617.32 608.87 350.14 593.65 349.74 536.32 482.3 696.45 589.78 1022.8 True False 419.8709294252497 648.7389512130923 695.2169215095737 435.92431571838176 506.3248714033998 386.749254661377 633.7624017614736 550.6675019818036 538.7051870021165 456.5482883800004 768.8105321560474 0.5461305638565672 0.8438216232467222 0.9042760113599273 0.5670113733950527 0.6585821216359582 0.5030488507705271 0.8243414667904644 0.7162590507670533 0.700699541005734 0.5938371930203131 1.0 9.586484289915031 -10.640838251126574 0.6264845465091055 1.033301560057348 0.6947704486466695 0.0 0.17000737714393335 0.7281659711123081 0.4335569014135181 0.13565641140989487 0.025473322796747504 2.286450211578485e-11 10.640838251126574 -0.3385311114106786 LKGTS(ph)PSSSSR ddPTM_A549_MK2206_60min_R1 2 LKGTSPSSSSR 11 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 LKGT(0.057)S(0.934)PS(0.007)S(0.002)S(0.001)SR;LKGT(0.032)S(0.932)PS(0.02)S(0.011)S(0.003)S(0.001)R 68.676 0.0032972 22908000.0 5177.0 5217.6 4832.9 5187.3 6524.6 5166.6 4780.0 4764.9 6742.200000000001 7984.5 6954.8 True False 6050.751034502051 5483.1535538285325 5518.277891772658 6458.188732866744 5564.83998308536 5713.326182688487 5648.464126677814 5440.339166894245 5215.102465081015 6180.795904523913 5227.731217284787 1.1574334607135233 1.0488591180241298 1.0555779672694758 1.2353712278691025 1.0644847165604017 1.0928882808278564 1.0804809757628568 1.0406692579959924 0.9975842766816289 1.1823094278619273 1.0 12.351969251836225 -8.278707012943668 1.3037085307256768 0.997749005685064 1.109910462570985 0.0 0.07444933622217388 0.24703193807216156 0.8167951109865365 0.008835042675925065 0.011449533166513984 5.2637225189965494e-09 8.278707012943668 0.11216145688592105 LKGTS(ph)PSSSSR ddPTM_A549_PD325901_60min_R1 3 LKGTSPSSSSR 11 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 LKGT(0.154)S(0.843)PS(0.001)S(0.002)SSR;LKGT(0.051)S(0.944)PS(0.004)S(0.001)SSR;LKGT(0.104)S(0.896)PS(0.001)SSSR 122.33 2.4211e-06 193263000.0 23723.2 21913.3 25112.3 25970.8 30812.6 26510.4 25731.4 25716.8 28548.9 25472.2 24819.5 True False 26131.561799903197 23760.01069573303 26816.57169052736 27574.95733203376 28648.42927369931 26294.508091895103 26710.622507762368 25203.85824956069 27349.089014474037 23863.88094488714 21766.858843773458 1.2005205706278694 1.0915681893407292 1.2319908849961785 1.266832184190956 1.3161489895862657 1.20800655163971 1.2271234310596497 1.157900569414057 1.2564554771437502 1.0963401341536951 1.0 14.409845608045712 -10.811070333180671 0.8306316581210773 0.9855122938712269 1.2197610438597923 0.5067943762624612 0.0618343628498275 0.35679448695907945 0.3911009097252042 0.05573494951658337 0.010850743481442663 1.5450042087291224e-11 10.811070333180671 0.23424874998856549 LKGTS(ph)PSSSSRPQR ddPTM_A549_MK2206_60min_R1 1 LKGTSPSSSSRPQR 14 2 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 LKGT(0.077)S(0.458)PS(0.458)S(0.002)S(0.002)S(0.002)RPQR 50.07899999999999 0.0054391000000000005 52481000.0 1940.4 2295.1 2228.8 2232.2 2722.8 1937.5 1515.3 1842.5 2798.8 3315.6 3100.8 True False 2267.8920817747326 2411.9107868353026 2544.8773542144268 2779.089100207264 2322.2797268713493 2142.524963991588 1790.6103956390984 2103.6800174195996 2164.8762687652 2566.603657215792 2330.785782273634 0.9730160956973274 1.034805860400664 1.0918538175275596 1.1923399916642357 0.9963505632019141 0.9192286053425288 0.76824322906775 0.9025625749988497 0.9288182059585962 1.1011752674722952 1.0 11.186600700088464 -6.993840891917156 24.933342854947174 0.9415043146629479 1.0744623607710528 0.33787882910302625 0.08902050181421772 135.13468958809779 547046.5639345435 0.01213431852511917 0.022888916535910117 1.0142829102619836e-07 6.993840891917156 0.1329580461081049 LKGTS(ph)PSSSSRPQR ddPTM_A549_PD325901_60min_R1 1 LKGTSPSSSSRPQR 14 2 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 LKGT(0.052)S(0.794)PS(0.151)S(0.003)SSRPQR 66.809 0.00083043 21072000.0 2604.4 2839.6 2537.9 2827.3 3471.7 3411.5 2747.7 3370.1 3660.9 3916.3 3835.6 True False 2868.7967707420544 3078.9030575770666 2710.1371556324734 3001.9358997358177 3227.8597687148113 3383.7178750792204 2852.265227099132 3302.8807117076944 3507.045104122684 3669.0241496400627 3363.845515871695 0.8528324969759036 0.9152926444005294 0.8056663550228994 0.8924119391249471 0.9595743185841146 1.005907631344472 0.8479180193148692 0.9818764554209314 1.0425702035290645 1.0907231418114884 1.0 11.715895736211316 -7.411320362453757 0.5638524985181733 1.0203436881553916 0.8546706354283806 0.5654622821103135 0.056231722679342316 0.49675194222464647 0.30484820055834416 0.012686347552817407 0.03485858781297784 3.8786414786804174e-08 7.411320362453757 -0.16567305272701094 LKGTSPSS(ph)SSRPQR ddPTM_A549_PD325901_60min_R1 2 LKGTSPSSSSRPQR 14 2 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 LKGT(0.012)S(0.055)PS(0.068)S(0.399)S(0.399)S(0.068)RPQR;LKGT(0.038)S(0.053)PS(0.053)S(0.308)S(0.275)S(0.275)RPQR 50.053000000000004 0.0054497 391450000.0 3041.4 3300.0 3172.6 3303.3 3517.2 2911.1 3762.6000000000004 3074.8 3277.3999999999996 3080.3 3283.2 True False 3350.160689039658 3578.1025813510064 3387.911714393628 3507.3373386613853 3270.164005681288 2887.3929667721295 3905.7878019737236 3013.470701866065 3139.6622754655073 2885.8093323127137 2879.3872139195814 1.1634978001028329 1.2426611343044394 1.176608584637637 1.2180846402686505 1.135715262564412 1.0027803668828723 1.356464939169105 1.0465666747765967 1.0903925183412984 1.0022303767836733 1.0 11.491546097195966 -9.178193003420354 0.2662903642562131 0.963724421035824 1.2209375902078023 0.38204256592037344 0.08643959870135595 1.3848233295653698 0.30048158122397667 0.13171085780051678 0.08366874499090775 6.634481640029538e-10 9.178193003420354 0.25721316917197834 LKIS(ph)LGK ddPTM_A549_MK2206_60min_R1 3 LKISLGK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LKIS(1)LGK;LKIS(1)LGK;LKIS(1)LGK 84.213 0.003948 68415200.0 5064.3 5297.9 5883.4 4965.6 6470.5 5470.4 5150.4 5213.700000000001 7999.299999999999 8006.9 7763.4 True False 5919.030029752511 5567.5404808395 6717.754588022777 6182.172222914253 5518.698021419523 6049.274097042363 6086.1610121425565 5952.757941286606 6187.471322257205 6198.135728966442 5835.533521060088 1.0143082904743994 0.9540756574778608 1.151180875540995 1.0594013727456397 0.9457058213277115 1.0366274266458926 1.0429485136496892 1.0200880381893895 1.060309447272815 1.06213694199472 1.0 12.510648846850195 LKIS(ph)LGK ddPTM_A549_PD325901_60min_R1 2 LKISLGK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LKIS(1)LGK;LKIS(1)LGK 84.213 0.003948 124165000.0 11049.6 9537.5 10945.1 11425.4 11455.9 11009.9 11546.400000000001 10495.1 10030.1 9568.3 10896.3 True False 12171.347257714408 10341.258596859167 11687.90030423302 12131.121009033928 10651.277104709508 10920.239024720708 11985.80457043252 10285.766997253328 9608.569777612309 8964.155905063708 9556.124177336727 1.2736698510657631 1.0821603408403233 1.2230795757083197 1.269460377859473 1.1146022076575817 1.1427477104806896 1.2542537484870713 1.0763534259681367 1.0054881664681548 0.9380535182164198 1.0 13.222209885721286 -8.49825011730823 3.746551738293531 1.0031860031160345 1.1887358331675217 0.6912467454156725 0.06241209900857604 0.09286813052576966 2.8078127725396453 0.009442282513377863 0.011166299006873118 3.1750449835692054e-09 8.49825011730823 0.18554983005148729 LKLEDFFAR ddPTM_A549_MK2206_60min_R1 1 LKLEDFFAR 9 1 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 60.434 0.0081746 13164000.0 809.86 761.85 1028.2 1092.4 1163.0 964.83 831.48 952.83 1604.7 1248.2 1045.3 False True 946.5445688239976 800.6249108755501 1174.0142209275277 1360.0380490396997 991.9242406167839 1066.9276701976792 982.54915314855 1087.8965704194939 1241.2380121793326 966.2307530874504 785.7231611876383 1.2046794794661189 1.0189656490021084 1.494183039167356 1.7309379641857208 1.2624347729771235 1.3578926050556965 1.2505029782543315 1.3845799947848216 1.5797396252175808 1.2297343400530165 1.0 9.617877277915143 -11.011130609216332 1.3014908094463284 1.0004979793869377 1.3866495540731916 0.1605753590520409 0.19433386312728773 0.4125630824603063 1.2470133452759216 0.139520115503112 0.03182450537605819 9.74696464556544e-12 11.011130609216332 0.38615157468625383 LKLEDFFAR ddPTM_A549_PD325901_60min_R1 2 LKLEDFFAR 9 1 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 90.82700000000001 0.001062 57006000.0 3748.3 3947.4 3942.3999999999996 3167.3 3932.0 4333.1 4294.1 4275.7 4288.9 4433.700000000001 3791.9 False True 4128.824656647383 4280.061251401505 4209.954971577075 3362.936927539792 3655.8298846636035 4297.8126702347245 4457.514325321683 4190.417809278239 4108.652448051507 4153.755425340022 3325.5203388345685 1.241557481526134 1.2870350547612215 1.2659537583981393 1.0112513486290498 1.0993256730298009 1.2923729919934566 1.3403960496852119 1.2600788394957687 1.235491601140346 1.2490542838765826 1.0 11.699364379117569 -10.590858145407786 0.8641663628873739 0.9990261769461616 1.2247069289918486 0.0 0.11430015940303433 0.4711936965865195 0.6249435741798758 0.06682642534168015 0.01809706753874534 2.5653218165739685e-11 10.590858145407786 0.22568075204568705 LKLPAVVTADLR ddPTM_A549_PD325901_60min_R1 1 LKLPAVVTADLR 12 1 P38117-2;P38117;M0QY67 P38117-2 ETFB Electron transfer flavoprotein subunit beta 0 68.676 0.007766800000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LKLS(ph)PS(ph)PSSR ddPTM_A549_MK2206_60min_R1 4 LKLSPSPSSR 10 1 P20700;Q03252 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 2 LKLS(0.928)PS(0.86)PS(0.059)S(0.153)R;LKLS(0.998)PS(0.974)PS(0.019)S(0.009)R;LKLS(0.845)PS(0.563)PS(0.554)S(0.038)R;LKLS(0.999)PS(0.876)PS(0.121)S(0.004)R 92.781 0.00021478 96585000.0 16978.699999999997 19053.300000000003 17984.3 16672.5 26342.8 19462.5 18610.9 18904.6 28837.8 27150.700000000004 28841.1 True False 19844.289470639356 20023.031586775767 20534.74416789238 20757.263248456955 22467.80901609614 21522.008831838077 21992.259626608397 21584.384942909386 22306.08434450374 21017.338013019926 21679.058896133945 0.915366740120726 0.9236116605756581 0.9472156640320935 0.9574799048199747 1.036383042443916 0.9927556788766382 1.0144471552928114 0.9956329306692625 1.0289230935426634 0.969476494054268 1.0 14.404014509149443 -6.45748351122004 2.03700375361765 1.0123543064069258 0.9245043224534306 0.7340320679310282 0.02004379667019058 0.08943582959348918 0.7247547212079171 0.0023205010717656576 0.006457420800575113 3.487518248812514e-07 6.45748351122004 -0.08784998395349519 LKLS(ph)PS(ph)PSSR ddPTM_A549_PD325901_60min_R1 2 LKLSPSPSSR 10 1 P20700;Q03252 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 2 LKLS(0.952)PS(0.506)PS(0.503)S(0.038)R;LKLS(0.986)PS(0.89)PS(0.119)S(0.005)R 82.069 0.00031236 143938000.0 11520.2 12408.400000000001 12786.7 12071.3 13843.9 13223.7 12385.2 13607.900000000001 13470.3 13632.0 13574.7 True False 12689.722223276991 13454.099415283583 13654.482354673457 12816.916785088593 12871.552222862269 13116.010571503763 12856.525563441483 13336.47975930896 12904.19013523007 12771.273193548319 11905.09795711323 1.0659065779206758 1.1301124496203605 1.1469441413974237 1.076590619519477 1.081179866745371 1.1017137883915535 1.0799176629840144 1.1202326774086295 1.0839213739959097 1.0727566660564565 1.0 13.539291870939726 -10.467578129682428 0.4754218552285165 0.9825940930740119 1.1044930186042872 0.25607994288295943 0.03205245266312218 0.5962941546145866 0.2034950564443366 0.03338478374379692 0.006382842363780286 3.407390202539495e-11 10.467578129682428 0.12189892553027526 LKLS(ph)PSPS(ph)SR ddPTM_A549_PD325901_60min_R1 2 LKLSPSPSSR 10 1 P20700;Q03252 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 2 LKLS(0.942)PS(0.227)PS(0.743)S(0.087)R;LKLS(0.997)PS(0.092)PS(0.496)S(0.414)R 75.462 0.004869600000000001 60638000.0 16176.6 16401.699999999997 19044.5 18062.199999999997 20735.0 19299.8 19063.5 20482.0 18863.7 19693.5 19840.0 True False 17818.83652341648 17783.928820771143 20336.974293881816 19177.86107176751 19278.645131866684 19142.628827628305 19788.97192444746 20073.470442181835 18070.924289283794 18450.04904908626 17399.805776122237 1.0240824956718355 1.0220762834707062 1.1688046726240047 1.1021882266114316 1.1079804786282603 1.1001633623921103 1.1373099320225677 1.1536606040585045 1.0385704600267742 1.0603594825411944 1.0 14.086783581750513 -8.937519848087833 5.679615975962489 1.0166093118298136 1.1029360053191275 0.3022030003097591 0.045857343456136436 0.1420216548419892 8.53955547139952 0.008146418128426258 0.0085575544550322 1.1547292101517328e-09 8.937519848087833 0.08632669348931388 LKLS(ph)PSPSSR ddPTM_A549_MK2206_60min_R1 5 LKLSPSPSSR 10 1 P20700;Q03252 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 1 LKLS(0.964)PS(0.035)PS(0.001)SR;LKLS(0.962)PS(0.036)PS(0.002)SR;LKLS(0.489)PS(0.489)PS(0.021)S(0.002)R;LKLS(0.988)PS(0.011)PSSR;LKLS(0.796)PS(0.203)PS(0.001)SR 113.95 8.2556e-05 1106487000.0 36784.799999999996 39380.7 38441.3 35474.3 48299.9 36588.3 35335.4 35829.6 50036.7 52568.8 50260.600000000006 True False 42993.17493798556 41385.00942143041 43892.854377496005 44165.50509250186 41195.04869249064 40460.04962065208 41755.38479117391 40908.55552354807 38703.46734219083 40693.47156938281 37779.50589800769 1.138002573513086 1.0954354335166905 1.1618165281460366 1.1690334228227939 1.0904072912891927 1.070952323460264 1.105239038962018 1.0828239954748957 1.024456684178918 1.0771308571171332 1.0 15.205316213007986 -8.338260725239303 0.585779945408877 1.0018992284546206 1.1369847592744928 0.5258177684641504 0.034045014302789244 0.22387424511506385 0.16484392977510115 0.007597159642456837 0.010065483083228983 4.5892241969412094e-09 8.338260725239303 0.13508553081987218 LKLS(ph)PSPSSR ddPTM_A549_PD325901_60min_R1 7 LKLSPSPSSR 10 1 P20700;Q03252 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 1 LKLS(0.963)PS(0.036)PS(0.001)SR;LKLS(0.998)PS(0.002)PSSR;LKLS(0.481)PS(0.429)PS(0.088)S(0.003)R;LKLS(0.992)PS(0.008)PSSR;LKLS(0.972)PS(0.024)PS(0.004)SR;LKLS(0.498)PS(0.498)PS(0.004)SR;LKLS(0.449)PS(0.449)PS(0.085)S(0.016)R 143.31 3.8276e-08 2029889000.0 65613.5 63000.700000000004 67381.9 68250.70000000001 79076.4 67217.2 70769.50000000001 70864.7 71246.6 71007.5 72877.0 True False 72274.53421789441 68309.99008997578 71954.84093428116 72466.39073041391 73522.34646277029 66669.80540899163 73462.67204905646 69451.24796621817 68252.35316872541 66524.07433178427 63913.59100536583 1.1308163581643635 1.0687866072842136 1.1258143972577013 1.1338181690390396 1.1503397838590819 1.0431240736167429 1.1494061105546227 1.0866428700647948 1.0678848128404383 1.0408439470440534 1.0 15.9638351274845 -9.58463874067537 0.5102392179610538 0.9993467381862599 1.117191897211327 0.5224650481756896 0.03340046621440571 0.3809287899934002 0.2192031623472964 0.018520853068073464 0.00899004635316414 2.6023233545962167e-10 9.58463874067537 0.1178451590250672 LKLSPS(ph)PSSR ddPTM_A549_MK2206_60min_R1 1 LKLSPSPSSR 10 1 P20700;Q03252 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 1 LKLS(0.184)PS(0.713)PS(0.102)S(0.001)R 83.53 0.00027034 10241000.0 2768.1 3928.5 3919.6 2718.0 5199.1 3483.4 3151.5 3086.0 5163.4 4358.6 4509.5 True False 3235.2876064526054 4128.443870019818 4475.458218583485 3383.9101220156554 4434.319277206127 3852.011075906221 3724.086756323248 3523.449950478633 3993.8981442554805 3373.9892328208316 3389.6666941314984 0.9544559682088601 1.2179497993615 1.3203239794437043 0.9983017291564952 1.3081874052346287 1.136398184097326 1.0986586860503802 1.0394679679210799 1.1782568920920995 0.9953749254055542 1.0 11.72692770481892 -11.661878900007274 0.4544645409184566 0.8888378175207311 1.152252421954608 0.19362315167040367 0.1107802528946673 4.7687854527920175 0.727712330859982 0.65580232965235 0.025696258174919166 2.178317096232075e-12 11.661878900007274 0.2634146044338769 LKMS(ph)PGR ddPTM_A549_PD325901_60min_R1 5 LKMSPGR 7 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 LKMS(1)PGR;LKMS(1)PGR;LKMS(1)PGR;LKMS(1)PGR;LKMS(1)PGR 56.563 0.010401 94567300.0 14524.800000000001 15847.9 15915.5 15991.4 18377.6 17032.0 17076.800000000003 17047.8 17101.9 17058.5 19199.2 True False 15999.347003407393 17183.45815120989 16995.621537676292 16979.152458895533 17086.820775278182 16893.29703894161 17726.666968783513 16707.76825525961 16383.166616459266 15981.42339877818 16837.820113756345 0.9502029891824342 1.020527481296178 1.0093718440305124 1.0083937436190877 1.0147881768447216 1.0032947807263923 1.0527887130888747 0.9922762057310207 0.9729980784789576 0.9491385043198973 1.0 14.039417753426411 -8.501699360251154 24.851996522646527 0.987006355953188 1.0099837185023481 0.2132139865928836 0.025914092380925527 927.2354594672236 1088024.3712904584 0.0037690897771257992 0.004533233177549768 3.1499280928650245e-09 8.501699360251154 0.022977362549160163 LKNDMAVPT(ph)PPPPPVPPTK ddPTM_A549_MK2206_60min_R1 1 LKNDMAVPTPPPPPVPPTK 19 1 G3V1P5;Q96RN5-3;Q96RN5-2;Q96RN5 G3V1P5 MED15 Mediator of RNA polymerase II transcription subunit 15 1 LKNDMAVPT(1)PPPPPVPPTK 48.097 0.0054107 2239300.0 1053.4 1338.1 1239.8 1074.2 1842.8 1164.4 1214.8 1359.0 1759.3 1697.7 1910.7 True False 1231.188166842662 1406.2035745127957 1415.6222827328813 1337.379048222671 1571.7265611423982 1287.616035133835 1435.513435374102 1551.6424117629497 1360.8213590248026 1314.1883908961431 1436.2204573626918 0.8572417699045122 0.979100086831366 0.9856580690490688 0.9311795005889821 1.0943490973722334 0.8965309110679731 0.999507720430408 1.0803650677781078 0.9475017237420895 0.9150324966888201 1.0 10.488061502021074 -5.261279329062807 5.489769186634666 0.9836318425146338 0.8525911139752533 0.27192674226591895 0.059152210671778054 0.13356502355876212 15.354649263097517 0.007019180388468957 0.06541161347899693 5.47924438106953e-06 5.261279329062807 -0.13104072853938042 LKNDMAVPT(ph)PPPPPVPPTK ddPTM_A549_PD325901_60min_R1 3 LKNDMAVPTPPPPPVPPTK 19 1 G3V1P5;Q96RN5-3;Q96RN5-2;Q96RN5 G3V1P5 MED15 Mediator of RNA polymerase II transcription subunit 15 1 LKNDMAVPT(1)PPPPPVPPTK;LKNDMAVPT(1)PPPPPVPPTK;LKNDMAVPT(1)PPPPPVPPTK 73.389 0.00015127 15437100.0 13074.1 14259.0 15333.9 15662.3 19708.7 16508.8 17264.800000000003 18048.6 17338.1 16672.2 17178.800000000003 True False 14401.373007356278 15460.655971964854 16374.550664231369 16629.724699335864 18324.428903323904 16374.357806275204 17921.821411661058 17688.606514147195 16609.439951866887 15619.51444670455 15065.916505385516 0.9558909344949783 1.0262008266432536 1.0868605742224884 1.1037977472788558 1.2162837154164228 1.0868477732783113 1.1895606487169008 1.1740810131148784 1.102451347445714 1.0367450557104272 1.0 13.879000818665427 -3.786648666400694 10.77276212147251 1.0771523117289052 0.634071850180469 0.0 0.07851590958243845 0.0 0.0 0.01140565211056565 0.0 0.00016343735814366796 3.786648666400694 -0.4430804615484363 LKNDSDLFGLGLEEAGPKES(ph)SEEGKEGK ddPTM_A549_MK2206_60min_R1 1 LKNDSDLFGLGLEEAGPKESSEEGKEGK 28 3 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 1 LKNDSDLFGLGLEEAGPKES(0.848)S(0.152)EEGKEGK 98.398 5.9971e-11 15080000.0 842.8 1373.2 1263.2 1020.9 1519.9 1112.9 968.98 914.06 1418.0 1688.2 1866.1 True False 985.0440355183176 1443.0900145885735 1442.3407545960442 1271.020545829942 1296.324723399356 1230.6663393167687 1145.031123319721 1043.630804191348 1096.8252640806968 1306.8344474941798 1402.6958682600716 0.7022506145542322 1.028797508599357 1.0282633514741502 0.9061269620809093 0.9241666370681905 0.8773579270917142 0.8163074756469039 0.7440178785768335 0.7819408960270325 0.9316591551062313 1.0 10.453986523187684 -7.240490407599617 4.308564162878398 0.8738087234988403 0.9302348841026691 0.05897626858341931 0.104336886781206 0.6173905409602349 28.16143245629533 0.018047855238349404 0.031032593444516362 5.747905142862631e-08 7.240490407599617 0.05642616060382877 LKNGFPHPEPDCNPSEAAS(ph)EESNSEIEQEIPVEQK ddPTM_A549_MK2206_60min_R1 1 LKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK 35 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 LKNGFPHPEPDCNPS(0.04)EAAS(0.32)EES(0.32)NS(0.32)EIEQEIPVEQK 82.20700000000001 3.1757999999999997e-06 9239200.0 511.09 629.56 0.0 336.26 895.77 473.61 487.81 344.17 902.28 824.86 812.19 True False 597.3494970491897 661.6019149318254 0.0 418.6437150952851 764.0034196193435 523.7270958431257 576.4387626850846 392.9571514764199 697.9150206450853 638.5235531098499 610.5008076963436 0.9784581601181186 1.0837035866149074 0.0 0.6857381838281102 1.251437197113997 0.8578647058950686 0.9442063882932632 0.6436636062107758 1.14318443456052 1.0459012421609186 1.0 9.253849393683126 -7.661505954777708 0.6469028059378228 1.0550342831868527 0.7280206771606926 0.08097361644363166 0.3130198215617128 1.1210357961231319 0.9450117602772853 0.07063955953973029 0.14909392677929242 2.1801885035827682e-08 7.661505954777708 -0.32701360602616003 LKNGFPHPEPDCNPSEAASEES(ph)NSEIEQEIPVEQK ddPTM_A549_PD325901_60min_R1 3 LKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK 35 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 LKNGFPHPEPDCNPS(0.035)EAAS(0.111)EES(0.427)NS(0.427)EIEQEIPVEQK;LKNGFPHPEPDCNPSEAAS(0.001)EES(0.5)NS(0.5)EIEQEIPVEQK;LKNGFPHPEPDCNPSEAAS(0.02)EES(0.864)NS(0.116)EIEQEIPVEQK 137.71 3.6561999999999996e-30 53324000.0 2715.46 2703.0600000000004 3639.1000000000004 2628.42 3067.11 2988.4 3198.17 3152.11 2589.72 3523.1099999999997 3084.37 True False 2991.1315001840017 2930.856352589897 3886.0712096860134 2790.77153382507 2851.6867745550835 2964.0634612008616 3319.8781094557767 3089.238693267543 2480.88307439389 3300.6602333422857 2705.012043432365 1.1057738199156342 1.0834910549495966 1.43661881991291 1.0317039218368453 1.0542233190712913 1.0957671957126627 1.2273062212481738 1.1420424913700704 0.9171430790548054 1.2202016776066211 1.0 11.401419301990137 -8.751479962653102 23.96772066468404 0.9608731230420414 1.1486630830819915 0.003939944193109057 0.13188314098129258 90.65120142873333 218154.9900713546 0.017998083526602805 0.020279243005566175 1.7722298098495737e-09 8.751479962653102 0.18778996003995008 LKNIT(ph)LDDASAPR ddPTM_A549_PD325901_60min_R1 2 LKNITLDDASAPR 13 1 O75534;O75534-4;E9PLT0;O75534-2;O75534-3 O75534 CSDE1 Cold shock domain-containing protein E1 1 LKNIT(0.985)LDDAS(0.015)APR;LKNIT(1)LDDASAPR 64.52 0.0023495 3728400.0 911.45 1032.9 1283.4 1027.3 1380.8 1310.8 1204.4 1303.0 1422.2 1283.9 1417.2 True False 1003.979733025973 1119.946107962865 1370.4992417111453 1090.753987832422 1283.817371501399 1300.1252793943545 1250.2341010729685 1277.0106428162744 1362.4298798337236 1202.834334888255 1242.893384370989 0.807776230568701 0.9010797885368536 1.1026683856755226 0.8775925606719979 1.0329263858388957 1.0460473084361372 1.005906151560775 1.0274498672808945 1.0961759849765635 0.9677695207115392 1.0 10.279486831707226 -4.188419127465997 0.6734788219117223 1.0396046104385523 1.2094362974036583e-11 0.4715314304951347 0.06386330405359937 5.840810806612738 0.6285590566014805 0.009978169447558659 6.528925507557466 6.480087535617528e-05 4.188419127465997 -1.039604610426458 LKNT(ph)PVK ddPTM_A549_PD325901_60min_R1 1 LKNTPVK 7 1 Q04656-5;Q04656;Q04656-2;Q04656-3 Q04656-5 ATP7A Copper-transporting ATPase 1 1 LKNT(1)PVK 48.64 0.022397 9306100.0 3995.1 4047.3 3673.0 3363.4 4024.1 4071.4 4134.7 3356.1 3887.0 4860.8 4454.7 True False 4400.679610962827 4388.380175000586 3922.2718675432748 3571.149579164381 3741.461098391354 4038.2438682683683 4292.048271094657 3289.1599526904815 3723.6429074066123 4553.888258450681 3906.800140669943 1.1264153405626203 1.1232671283379396 1.003960204340189 0.9140855561021853 0.9576791654742194 1.0336448558578901 1.0986096336012343 0.8419063771525441 0.953118350909058 1.1656312313098705 1.0 11.931771738433124 -5.806658618949105 4.157805444115478 0.9750311575373344 1.127655008805044 0.23170423879685753 0.08420268387085339 0.1287847172339911 4.635859080767508 0.00844765504349414 0.030636736298254898 1.560778884922316e-06 5.806658618949105 0.15262385126770972 LKPEDITQIQPQQLVLR ddPTM_A549_MK2206_60min_R1 1 LKPEDITQIQPQQLVLR 17 1 P05556;P05556-2;P05556-5;P05556-4;P05556-3;C9JPK5;E7ERX5;Q5T3E6;E9PLR6;E7EUI6;E7EQW5 P05556 ITGB1 Integrin beta-1;Integrin beta 0 81.317 0.00023707 1688700.0 1391.3 1406.6 1545.5 1605.1 1792.7 1637.6 1326.3 1585.7 2544.1 2028.9 2494.1 False True 1626.1174259808195 1478.189931925639 1764.6751395093313 1998.3495720556768 1528.9962047753302 1810.8897450490979 1567.2715420947247 1810.4778310025838 1967.8654120928766 1570.570080867752 1874.7461363418056 0.867380065203849 0.7884747184010913 0.9412875190412415 1.0659307590066882 0.8155750664774604 0.9659386462759642 0.835991343954944 0.9657189290361048 1.0496703387973236 0.837750802853984 1.0 10.872479534864286 -8.518285326953324 5.697147549027958 1.0229603333516684 0.9004989252859145 0.0003302869432415534 0.09239760638702658 0.13185769715175033 15.438428173141592 0.012252031072023292 0.014320034686183128 3.0318986038949555e-09 8.518285326953324 -0.1224614080657539 LKPGGVGAPS(ph)SSSPSPSPSAR ddPTM_A549_MK2206_60min_R1 2 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPS(0.249)S(0.249)S(0.249)S(0.249)PS(0.003)PSPSAR;LKPGGVGAPS(0.25)S(0.25)S(0.25)S(0.25)PS(0.001)PSPSAR 71.697 0.00033336 972630.0 250.73 0.0 309.84 330.44 389.96 407.37 210.33 387.62 319.71 384.86 286.93 True False 293.04709424004227 0.0 353.7799710291628 411.3978148340155 332.5974005768882 450.47762300967895 248.54423844438165 442.5663220364639 247.29619547196015 297.9198587031216 215.6773621348599 1.3587290355341244 0.0 1.640320372649724 1.9074686873106992 1.542106214971787 2.0886643760414776 1.1523890870334856 2.0519831921893297 1.1466024668705355 1.3813218770583657 1.0 7.752730946478403 -5.783640508700251 24.997317032730436 1.3255041866698325 0.6793633449403721 0.2274823201704016 0.4944244563694597 254.88263883830552 286985.00927603536 0.07277606440868464 0.22652033146767656 1.6457334307196889e-06 5.783640508700251 -0.6461408417294604 LKPGGVGAPSSS(ph)SPSPSPSAR ddPTM_A549_MK2206_60min_R1 2 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPSS(0.002)S(0.492)S(0.492)PS(0.015)PSPSAR;LKPGGVGAPSS(0.014)S(0.488)S(0.488)PS(0.008)PSPSAR 207.6 8.7847e-58 287110000.0 11504.2 13179.4 12386.0 10127.400000000001 15018.199999999999 12737.599999999999 12233.6 13736.099999999999 16623.8 17956.0 15580.0 True False 13445.827709313988 13850.175166231167 14142.521046886166 12608.613454636257 12809.042674489236 14085.48437746543 14456.286765716664 15683.234240041991 12858.535842753658 13899.727129016392 11711.056013874871 1.1481311073385538 1.1826580924744907 1.2076213306580188 1.0766418877766437 1.0937564178083945 1.2027510039041238 1.2344135958865994 1.3391818996904306 1.0979826095545346 1.1868893046492524 1.0 13.515583552509776 -9.251399152442023 2.15399211930338 1.032733965975674 1.1816499062673327 0.0791039933529949 0.08380390194164591 0.19320876464022865 1.847750074557522 0.015530752513488165 0.014195802559894817 5.605325635664513e-10 9.251399152442023 0.14891594029165867 LKPGGVGAPSSS(ph)SPSPSPSAR ddPTM_A549_PD325901_60min_R1 1 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPSS(0.017)S(0.487)S(0.487)PS(0.009)PSPSAR 217.89 3.774599999999999e-68 263110000.0 5133.0 5858.2 5697.1 4396.3 6496.0 5113.2 5335.7 5395.0 5514.6 6076.6 5871.3 True False 5654.098381285118 6351.891073354689 6083.739465445357 4667.849466278278 6039.743369983411 5071.559794476055 5538.752983307072 5287.392492704377 5282.840539538074 5692.922438960959 5149.16732123722 1.0980607209956765 1.2335763584836246 1.1814996650727565 0.9065251088319086 1.1729553524262264 0.9849281404313508 1.0756599344641697 1.026844179426266 1.0259601620925256 1.1056005920571033 1.0 12.330123435666968 -6.229504193693064 24.450612411741513 1.0219358687746818 1.177298730684068 0.392180553562098 0.07221628932028056 281.76983795603604 215731.59055847823 0.00833473641516832 0.022049053592595663 5.895162844711974e-07 6.229504193693064 0.1553628619093863 LKPGGVGAPSSSS(ph)PSPSPSAR ddPTM_A549_PD325901_60min_R1 1 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPSS(0.003)S(0.183)S(0.799)PS(0.014)PSPSAR 205.07 1.4020999999999996e-56 262100000.0 9196.9 7657.9 8626.6 9376.7 10351.0 8920.0 9021.6 9189.8 9799.0 9350.5 9718.5 True False 10130.562517600061 8303.258108402388 9212.05295195993 9955.87746296921 9623.981469011438 8847.35847741657 9364.921924808945 9006.502229741365 9387.182106940409 8760.107834233688 8523.186110647373 1.1885886787036968 0.9741965035856431 1.0808226914641705 1.1680934023641798 1.1291530355049884 1.0380341767222745 1.098758352009943 1.0567060384250229 1.1013700727728695 1.0277973190436784 1.0 13.05717711966519 -11.005165697660372 0.5739480965208238 0.9757717823001795 1.0926428934061587 0.21939541578283794 0.056745460172226404 1.653106029888288 0.6430889232768525 0.10790337366762884 0.0115782185459241 9.881760010073348e-12 11.005165697660372 0.11687111110597925 LKPGGVGAPSSSSPS(ph)PSPSAR ddPTM_A549_PD325901_60min_R1 1 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPSS(0.003)S(0.015)S(0.007)PS(0.952)PS(0.021)PS(0.001)AR 151.95 7.74e-23 69014000.0 2638.4 2934.9 2409.1 3128.2 3693.8 3410.5 3217.5 2812.9 2376.1 2446.4 3361.4 True False 2906.2484257125757 3182.234323032445 2572.5960130951535 3321.4218093423365 3434.360230918213 3382.7260187476704 3339.9437231835586 2756.7945028226395 2276.24078011033 2291.9338864947654 2947.9691096702254 0.9858476522631145 1.0794666445431056 0.872667221870224 1.126681347659673 1.1649919328029856 1.1474767519277294 1.1329642879321695 0.935150403638737 0.7721386132044517 0.7774619750853334 1.0 11.525505691876933 -8.402518162432848 5.343193326425721 0.8906533673402038 1.0733083994942871 0.49132103606428423 0.09879711510042549 0.1903763661318551 7.636976058905873 0.018795127013892916 0.022731701029491812 3.958055116865387e-09 8.402518162432848 0.1826550321540833 LKPGGVGAPSSSSPSPSPSAR ddPTM_A549_MK2206_60min_R1 2 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 0 ; 144.92 1.2425e-21 13350800.0 3029.8999999999996 3144.7 3159.6000000000004 3453.8 4582.8 2922.0 3429.4 2971.3999999999996 4238.1 4736.5 5102.200000000001 False True 3541.2730460571333 3304.7517979002982 3607.6787905491324 4299.981155046973 3908.67619079845 3231.2041005333776 4052.477589127384 3392.6050495308527 3278.177116855009 3666.5213603578845 3835.18292644367 0.9233648339535458 0.8616933954085899 0.940679717171796 1.121193235764195 1.0191629097658008 0.84251629257477 1.056658226439595 0.8846005821883401 0.8547642132665709 0.956022549818195 1.0 11.905079676152813 LKPGGVGAPSSSSPSPSPSAR ddPTM_A549_PD325901_60min_R1 2 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 0 ; 118.32 1.1281e-14 8891200.0 3579.1000000000004 3418.7 3473.5 3593.7 4401.8 3937.1000000000004 3977.3999999999996 4502.8 4132.7 4178.9 4265.2 False True 3942.4475972058403 3706.8058469286943 3709.2325978523186 3815.6746871151304 4092.6327533856165 3905.0375629413456 4128.762133516792 4412.988121621736 3959.0169908513762 3915.0435408244653 3740.6074393304707 1.0539591927645573 0.9909636087320014 0.9916123672459551 1.0200681972118668 1.0941091306063795 1.0439581341474062 1.1037678239381883 1.1797517363681485 1.0583887924791162 1.0466330948444076 1.0 11.869056853852646 -4.887478404286249 19.065058474942028 1.042452752426754 2.6617596437746234 0.0 0.054848394680252405 4319.589001830174 652797.8527433211 0.008116319045273395 32947.0370095342 1.2957511283949297e-05 4.887478404286249 1.6193068913478694 LKPLEVELR ddPTM_A549_MK2206_60min_R1 2 LKPLEVELR 9 1 P49755 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 0 ; 72.79 0.0025176 3792600.0 1274.54 1662.79 1624.43 1625.3600000000001 2017.9299999999998 1164.22 1565.37 1362.33 2956.6 2385.6 2105.5 False True 1489.651192488748 1747.418908649676 1854.798600370846 2023.5732729651822 1721.0951701357062 1287.4169876533092 1849.7774665225202 1555.4444494606466 2286.93482072002 1846.6913031288432 1582.646241156197 0.9412407863177864 1.1041121276559598 1.171960323246861 1.2786011303997207 1.0874793907692004 0.8134584685916867 1.1687877040488666 0.9828124624516985 1.445006951805798 1.166837702012137 1.0 10.628123099729839 LKPLEVELR ddPTM_A549_PD325901_60min_R1 2 LKPLEVELR 9 1 P49755 P49755 TMED10 Transmembrane emp24 domain-containing protein 10 0 ; 95.573 0.0009257 6094500.0 3158.8 3096.4 2956.5 3223.8 3633.6000000000004 3497.3999999999996 3516.6 3514.5 3952.0 3412.1 3584.5 False True 3479.4790506143463 3357.3444948167466 3157.1458688787616 3422.926804218982 3378.388471239488 3468.918333959276 3650.4261373573554 3444.4005404280865 3785.911183450201 3196.659423687373 3143.6292240176454 1.1068350631272843 1.0679836124331379 1.0042996943653049 1.0888455858812722 1.074677778609595 1.1034756603788987 1.16121395916151 1.0956764602239086 1.2043122498434156 1.016869101249146 1.0 11.618215353335193 -6.957151533544462 2.16600426043392 1.104247731908216 1.0616615558110902 0.04652631925960615 0.05870266235115188 0.7980497679640256 7.532342895286223 0.011620914466255036 0.023981451346855056 1.1036934532258307e-07 6.957151533544462 -0.04258617609712578 LKPPRT(ph)PPPPSR ddPTM_A549_MK2206_60min_R1 2 LKPPRTPPPPSR 12 2 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 LKPPRT(1)PPPPSR;LKPPRT(1)PPPPSR 132.08 2.0985e-08 62959000.0 7823.1 8059.0 6926.799999999999 6972.2 9850.599999999999 8103.099999999999 6754.4 6432.6 9932.900000000001 10485.2 9904.9 True False 9143.448023568286 8469.16867722787 7909.124397510996 8680.389312993946 8401.589789010917 8960.564663597544 7981.587049630252 7344.440749011295 7683.1140095819155 8116.5860377123345 7445.23996866683 1.2280931255471061 1.1375279659044204 1.0623061755962757 1.1658978554788324 1.1284511747598291 1.2035293289817297 1.0720389246311242 0.9864612530852268 1.0319498151726707 1.0901711794207916 1.0 12.86210263394311 -7.981453674236091 5.294282018651115 1.013851771160995 1.1485231292384421 0.6098157334040224 0.04746119722025138 0.07254613210335013 5.971590982790552 0.0064466839756030835 0.008814674352392526 1.043629449715236e-08 7.981453674236091 0.13467135807744723 LKPPRT(ph)PPPPSR ddPTM_A549_PD325901_60min_R1 4 LKPPRTPPPPSR 12 2 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 LKPPRT(1)PPPPSR;LKPPRT(1)PPPPSR;LKPPRT(1)PPPPSR;LKPPRT(1)PPPPSR 132.08 2.0985e-08 105892500.0 10812.880000000001 9698.72 9680.169999999998 9661.21 11443.46 10386.650000000001 10536.939999999999 10085.57 11731.86 12920.2 9671.21 True False 11910.595617578458 10516.065172060798 10337.12454779101 10257.96099950012 10639.710847393832 10302.064566082834 10937.929017734812 9884.4053943734 11238.810722842129 12104.416367024878 8481.712480851367 1.4042677872503067 1.2398516450306778 1.2187544167676623 1.2094209775041158 1.2544295590559622 1.2146208197154953 1.2895896957635256 1.1653785030663093 1.3250638651351705 1.4271193929707313 1.0 13.05013986291824 -10.869808063664562 0.9752568915609222 0.990875670605052 1.256950440970705 0.0 0.140036481213866 0.25701506944078517 0.4086805261316856 0.05017380619576727 0.010558823638528284 1.3495591881521753e-11 10.869808063664562 0.2660747703656531 LKPS(ph)DKDRR ddPTM_A549_MK2206_60min_R1 1 LKPSDKDRR 9 3 P17252;J3KRN5 P17252 PRKCA Protein kinase C alpha type 1 LKPS(1)DKDRR 43.083999999999996 0.021026 8102900.0 1135.9 1570.2 1587.2 1136.9 1680.4 1300.6 1134.1 1350.2 1884.8 1901.6 1928.3 True False 1327.6121499113153 1650.1164731335402 1812.2888265475326 1415.4405510373804 1433.215386012419 1438.2286287315928 1340.1512899718223 1541.5949848140804 1457.8958094071209 1472.027239281442 1449.4498916274026 0.9159420809095434 1.1384432691776842 1.2503287192030794 0.9765363806044806 0.9887995399435603 0.9922582609025478 0.9245930457569231 1.0635724585713133 1.0058269815524532 1.0155764940785157 1.0 10.501289744070219 LKQAIEEEGGDPDNIELTVSTDT(ph)PNKKPTK ddPTM_A549_MK2206_60min_R1 1 LKQAIEEEGGDPDNIELTVSTDTPNKKPTK 30 3 Q9NWH9;H7BXE3;H0YL55;H0YKU6;H0YMW8;H0YNF3;H0YMR6;H0YLE6 Q9NWH9 SLTM SAFB-like transcription modulator 1 LKQAIEEEGGDPDNIELT(0.005)VS(0.147)T(0.095)DT(0.716)PNKKPT(0.038)K 114.03 4.3172e-21 7083000.0 1144.9 1250.2 1474.4 1489.5 1999.3 1371.8 1248.0 1413.0 1961.9 1752.8 1996.5 True False 1338.1311298824414 1313.8298399640512 1683.4920903866437 1854.4275668661953 1705.205618456696 1516.9629654728571 1474.7454456263415 1613.2970771310154 1517.5327825105217 1356.841262627531 1500.7139494031564 0.8916630184017579 0.8754698658505639 1.1217941240941882 1.2356968945372389 1.1362629228140826 1.0108275238436766 0.9826959003165509 1.0750197116330091 1.0112072211456782 0.9041305061282034 1.0 10.551433296193792 -8.876662568699013 1.0187713928634594 1.002503130214176 1.047229767112755 0.05548027581470949 0.10406158945579214 1.602053985368116 3.364961253197951 0.024963958655449855 0.024852209059809637 1.3284261965738077e-09 8.876662568699013 0.04472663689857903 LKQAIEEEGGDPDNIELTVSTDT(ph)PNKKPTK ddPTM_A549_PD325901_60min_R1 1 LKQAIEEEGGDPDNIELTVSTDTPNKKPTK 30 3 Q9NWH9;H7BXE3;H0YL55;H0YKU6;H0YMW8;H0YNF3;H0YMR6;H0YLE6 Q9NWH9 SLTM SAFB-like transcription modulator 1 LKQAIEEEGGDPDNIELT(0.041)VS(0.148)T(0.118)DT(0.671)PNKKPT(0.021)K 118.8 2.7436e-21 22467000.0 1117.7 1492.7 1503.1 1661.7 2042.6 2048.8 1677.5 1937.3 1896.0 1712.3 1576.8 True False 1231.1680811927488 1618.495067631106 1605.1094048745697 1764.3394350054862 1899.1348225874565 2032.1152520774756 1741.338180463223 1898.6590317175517 1816.3177135176052 1604.1850857770532 1382.8635961587468 0.8903033420017921 1.1703938639551184 1.1607141943234074 1.2758593399279474 1.3733348884610048 1.4694979734242692 1.259226278933244 1.3729908264210275 1.3134467626184438 1.1600457848721182 1.0 10.433443142632399 -4.045711344419152 10.752742049886463 1.2006032531606077 1.2019884669035557 0.0 0.16358712210255683 0.0 0.0 0.024743085662552445 0.0 9.000956349565901e-05 4.045711344419152 0.0013852137429479772 LKQLEMENS(ph)PLLSPR ddPTM_A549_MK2206_60min_R1 1 LKQLEMENSPLLSPR 15 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 LKQLEMENS(0.998)PLLS(0.002)PR 51.348 0.011898 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LKQLEMENS(ph)PLLSPR ddPTM_A549_PD325901_60min_R1 2 LKQLEMENSPLLSPR 15 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 LKQLEMENS(0.989)PLLS(0.011)PR;LKQLEMENS(0.997)PLLS(0.003)PR 81.807 8.8686e-05 9418500.0 4850.1 5596.9 6117.9 5949.799999999999 7083.0 7778.5 6663.7 6209.1 7119.1 7103.9 6567.4 True False 5342.478581545092 6068.570405322256 6533.0974839213195 6317.305633023795 6585.514515023477 7715.154474953455 6917.290750016552 6085.2546295552775 6819.908984337129 6655.358541640842 5759.651434178686 0.9275697744210659 1.0536350115408715 1.134286954441875 1.096820824179724 1.1433876841824122 1.3395176015636125 1.2009912108514502 1.0565317535440444 1.1840836311493967 1.1555141170777954 1.0 12.491765789142498 -5.337146648414061 2.356249195327623 1.1177918496442019 0.8988830778083186 0.33046465436817174 0.0858884988208762 0.5509189167346429 4.079969299772496 0.01435493944489385 0.22864705271658559 4.601011847726412e-06 5.337146648414061 -0.2189087718358833 LKQLMEQDASS(ph)SPSAQVIGLK ddPTM_A549_MK2206_60min_R1 1 LKQLMEQDASSSPSAQVIGLK 21 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LKQLMEQDAS(0.02)S(0.439)S(0.439)PS(0.102)AQVIGLK 50.938 0.0058934 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LKQLMEQDASS(ph)SPSAQVIGLK ddPTM_A549_PD325901_60min_R1 1 LKQLMEQDASSSPSAQVIGLK 21 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LKQLMEQDAS(0.108)S(0.423)S(0.423)PS(0.046)AQVIGLK 52.79 0.0022113000000000002 2313400.0 1276.1 2057.5 1876.0 1807.7 2450.4 2044.7 2234.1 2445.7 2163.0 2194.3 2432.5 True False 1405.6487325848314 2230.8927457968775 2003.316641304432 1919.3575234154282 2278.292357421083 2028.0486411181232 2319.119898046428 2396.9185948854647 2072.0966320351167 2055.7515235184196 2133.3179208879696 0.6589026036961926 1.0457385296178892 0.9390614599396296 0.8997053390975674 1.0679572580878003 0.9506546686084044 1.087095306020361 1.123563708632689 0.9713023135213854 0.9636404885506873 1.0 11.058883266144749 -5.256525934609328 24.855833125571497 0.9983251292699564 0.6589024518313181 0.6925860744143585 0.06613216660008828 200.2070041925697 1012757.6133280008 0.008743628064061483 0.09990757707869981 5.539544626489539e-06 5.256525934609328 -0.3394226774386383 LKQLMEQDASSS(ph)PSAQVIGLK ddPTM_A549_PD325901_60min_R1 1 LKQLMEQDASSSPSAQVIGLK 21 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LKQLMEQDAS(0.043)S(0.402)S(0.551)PS(0.004)AQVIGLK 116.24 3.8455e-15 2511100.0 1449.5 1477.1 1707.1 1674.6 1746.8 1814.6 2234.8 2091.2 1940.1 2265.5 1993.6 True False 1596.6521729344988 1601.5804008829016 1822.954071626225 1778.0362387074604 1624.1107941328535 1799.8224992287116 2319.846536929483 2049.4893754853365 1858.5643438794864 2122.4559433673517 1748.3998384716356 0.9132076872817678 0.9160263949022803 1.0426414093127354 1.0169505850914122 0.9289126882741939 1.0294112705947327 1.3268398256987817 1.1722086277912829 1.0630087597721074 1.2139419694883393 1.0 10.771819434612913 -7.515499998470588 24.987774346935016 1.0686904849123933 0.9693579211222135 0.3172637903997736 0.10378044795611308 503.3736035703229 1704651.3959869128 0.01645357668555598 0.02498799298307479 3.0514060398868765e-08 7.515499998470588 -0.09933256379017974 LKQQQQQQQQHSENKR ddPTM_A549_PD325901_60min_R1 1 LKQQQQQQQQHSENKR 16 2 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 0 46.408 0.0084801 742450.0 199.89 86.945 163.5 159.6 357.28 247.55 166.9 200.96 254.61 314.11 249.9 False True 220.18268564875942 94.27216028350401 174.59609320537044 169.45812952210116 332.1858853490877 245.53403487494086 173.25147083118432 196.95169514992983 243.90962713012541 294.27704099365224 219.16388424662023 1.0046485825237188 0.43014459525375837 0.7966462805016786 0.7732028025722236 1.5156962858683702 1.120321606449751 0.7905110434903057 0.8986503220042609 1.1129097659889042 1.3427259788045591 1.0 7.7758662676756165 -6.553536515391005 24.999718972705164 1.057524026680423 0.7245254580431519 0.35267331288428505 0.22732622931957042 159.0013810142748 129656.37476075064 0.02896247568437531 0.0602906538323266 2.7955256704739227e-07 6.553536515391005 -0.33299856863727095 LKQQSELQSQVR ddPTM_A549_PD325901_60min_R1 2 LKQQSELQSQVR 12 1 C9J9W2;Q14847;Q14847-2 C9J9W2 LASP1 LIM and SH3 domain protein 1 0 ; 86.944 0.00028476 6554500.0 5200.0 5081.700000000001 5232.5 4636.9 6054.200000000001 5985.1 5777.1 5696.200000000001 5654.2 6026.6 5987.1 False True 5727.900171962322 5509.952693227704 5587.6089155785985 4923.310781836036 5628.973877856154 5936.359329953582 5996.950701850418 5582.584822417547 5416.573637010153 5646.079447494008 5250.724655353898 1.0908780307346477 1.0493699546041677 1.064159574599136 0.937644059628224 1.0720375276423177 1.1305790571022567 1.1421186779877386 1.0632027365451868 1.031585922428278 1.075295281716398 1.0 12.358300828305625 -9.024877105117735 2.0748737750315245 1.0115364349699794 1.0679309918488527 0.027856253496925665 0.05365526468681209 0.383984479018055 3.3472209972031384 0.01056645886682882 0.010446210137992004 9.443280605861956e-10 9.024877105117735 0.05639455687887329 LKQRS(ph)PK ddPTM_A549_MK2206_60min_R1 3 LKQRSPK 7 2 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 LKQRS(1)PK;LKQRS(1)PK;LKQRS(1)PK 76.71600000000001 0.0036058 62173000.0 7859.6 8477.4 6823.400000000001 5325.1 12925.6 13047.2 13089.599999999999 12284.0 13441.5 12784.6 12753.9 True False 9186.108331228957 8908.863450096986 7791.06072269685 6629.749739052823 11024.261362438781 14427.846043969581 15467.810885473193 14025.294618172247 10397.021711664804 9896.549980709678 9586.75464026693 0.9582083484899935 0.9292887723106399 0.8126901141260373 0.6915530842112203 1.1499471694137178 1.5049770840456032 1.6134564266935816 1.4629867086889095 1.0845194335103283 1.0323149336837645 1.0 13.226826793669602 -6.786583249742019 21.313436622172915 1.1595555988800479 0.851228941616893 0.4169810952012487 0.21517497028240257 47.86846415830383 40576.088439677565 0.03822065909018032 0.07227758094892622 1.6346197814594035e-07 6.786583249742019 -0.3083266572631549 LKQRS(ph)PK ddPTM_A549_PD325901_60min_R1 4 LKQRSPK 7 2 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 LKQRS(1)PK;LKQRS(1)PK;LKQRS(1)PK;LKQRS(1)PK 78.934 0.0033994 90959000.0 16203.400000000001 17924.6 14192.1 14607.3 14463.699999999999 18281.6 13892.0 18609.2 15353.7 18841.199999999997 22358.899999999998 True False 17848.357239687368 19435.16894838918 15155.261250030197 15509.559745414723 13447.819609056203 18132.72071084517 14420.667661994094 18238.02490736501 14708.437382929993 17651.563416540685 19608.89704474493 0.9102172956979558 0.9911403432860438 0.7728767821794301 0.7909450342884632 0.685801938700073 0.9247190532679468 0.7354145227591344 0.9300892786447005 0.7500899897310527 0.9001813501423428 1.0 14.259220769091371 -10.968475824466086 1.19666480932296 1.0013757246619992 0.8245696465448691 0.15511135883720562 0.09597065125831734 0.4563260953161742 1.146954496855645 0.06710841141036637 0.015014400535829992 1.0752864558634681e-11 10.968475824466086 -0.17680607811713012 LKS(ph)DERPVHIK ddPTM_A549_MK2206_60min_R1 4 LKSDERPVHIK 11 2 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK 118.51 3.186e-06 275569000.0 15665.099999999999 14522.8 14292.3 10895.599999999999 15474.8 12385.1 12558.8 13053.0 17511.2 17391.2 17716.5 True False 18308.985905075944 15261.948488105836 16319.163051704438 13565.02248912207 13198.477419343595 13695.683061435986 14840.571396259693 14903.302723135968 13544.941159640259 13462.515841287037 13317.004099474609 1.374857720874193 1.146049695119337 1.2254380136706777 1.0186241881278122 0.9910995987351472 1.028435747194545 1.1144076614683323 1.1191182800434778 1.0171162416458701 1.0109267625605198 1.0 13.7009819381621 -2.0000000000000373 0.498475573196899 1.018668640309567 11.977600609756433 0.7353089658087523 0.05847856649713198 33.43060250840381 0.31893446075915177 0.011122464739554095 385.99695526266424 0.009999999999999142 2.0000000000000373 10.958931969446866 LKS(ph)DERPVHIK ddPTM_A549_PD325901_60min_R1 8 LKSDERPVHIK 11 2 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK 135.02 1.0519e-08 250675300.0 16622.7 16594.9 17062.600000000002 16398.0 21189.100000000002 18569.1 17186.199999999997 21323.899999999998 26479.800000000007 30461.600000000002 32430.300000000003 True False 18310.22426701502 17993.410462806623 18220.570641748942 17410.867217439947 19700.850714426648 18417.879406165473 17840.230245649487 20898.578086224068 25366.94609198498 28538.249377390835 28441.578692609703 0.64378368250609 0.6326445749469616 0.6406314796612679 0.6121624754241933 0.6926778195876216 0.6475688148404786 0.6272587903246424 0.734789665232415 0.8918965563109322 1.0033989212000476 1.0 14.795713925687787 -8.778050934941978 1.3150662932003399 0.9649493996233424 0.6387736884715127 0.9598053879775427 0.029025218486513918 0.05678575003820697 0.19367983409519418 0.006809348762835623 0.0072097924726462394 1.6670516858660464e-09 8.778050934941978 -0.32617571115182964 LKS(ph)EDELRPEVDEHTQK ddPTM_A549_MK2206_60min_R1 4 LKSEDELRPEVDEHTQK 17 2 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCR2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK 195.39 1.3145999999999999e-48 537179000.0 24010.7 26871.8 25552.800000000003 23147.600000000002 37083.4 30856.5 28340.9 31208.3 39905.5 36081.600000000006 35751.600000000006 True False 28063.119154745687 28239.459841262174 29176.571274573973 28818.763039135243 31628.480984082922 34121.714349113005 33490.07467944837 35632.17209641035 30866.967965988875 27930.741500240492 26873.491026036525 1.044267718234173 1.0508296005867723 1.0857008211663344 1.0723862787761378 1.1769397936963046 1.2697164769569387 1.246212285817326 1.3259227117864192 1.1486028345213224 1.0393417614845666 1.0 14.713896127726045 -3.85461322614092 14.82470342514426 1.1135156458167037 0.42776167922094055 0.0 0.10529407517748407 0.0 0.0 0.01603556864673512 0.0 0.0001397612492319932 3.85461322614092 -0.6857539665957632 LKS(ph)EDELRPEVDEHTQK ddPTM_A549_PD325901_60min_R1 3 LKSEDELRPEVDEHTQK 17 2 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCR2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 LKS(0.998)EDELRPEVDEHT(0.002)QK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK 207.89 1.9448e-55 334269000.0 10937.2 12222.4 12264.9 11332.100000000002 13714.599999999999 12758.1 12994.8 15262.2 20596.8 23051.3 24339.1 True False 12047.536492458912 13252.424542516526 13097.269868835157 12032.05807993361 12751.333808801484 12654.202263534571 13489.324225027407 14957.783448035721 19731.18812330139 21595.83698404053 21345.544998266952 0.5644051952497373 0.6208520112085446 0.6135832966503562 0.5636800597459795 0.5973768207762682 0.5928263843608569 0.631950330906173 0.7007449774297234 0.924370313566759 1.0117257247727287 1.0 14.381647377752682 -8.679505937228145 1.6627970705067847 0.9736658488915554 0.593932314312579 0.9765616118373788 0.025846526923273733 0.03463450252608102 0.18731170167292963 0.005150325515007097 0.0057022332689399624 2.0916743116843077e-09 8.679505937228145 -0.3797335345789764 LKS(ph)EDGVEGDLGETQSR ddPTM_A549_MK2206_60min_R1 14 LKSEDGVEGDLGETQSR 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKS(1)EDGVEGDLGETQSR;LKS(0.985)EDGVEGDLGET(0.006)QS(0.009)R;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(0.998)EDGVEGDLGET(0.001)QSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR 279.53 1.6894e-115 2851517500.0 118085.8 112684.80000000002 98273.7 91751.61 117410.8 87706.79999999999 81987.51000000001 81630.19999999998 124562.8 116960.1 120617.60000000002 True False 138015.79611937495 118419.9750043044 112210.38839055193 114230.75856888643 100139.82685314634 96987.87536093793 96883.57930348076 93201.53083200302 96349.52468591751 90538.7321776827 90664.9210435915 1.5222623538492606 1.3061278126230136 1.2376384063313906 1.2599223299821165 1.1045046496538538 1.0697398094496369 1.0685894631386634 1.0279778525058432 1.0626990414472743 0.9986081842408694 1.0 16.468256848433942 -2.0000000000183817 0.3233959256935606 1.015565568642452 5.973096296224703 0.9525866609132189 0.03384674128882453 6.938919679103476 0.08651892017068691 0.010047055674438787 20.757002597779845 0.009999999999576745 2.0000000000183817 4.9575307275822516 LKS(ph)EDGVEGDLGETQSR ddPTM_A549_PD325901_60min_R1 6 LKSEDGVEGDLGETQSR 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR 271.11 8.849399999999997e-101 1064386000.0 15134.5 14583.8 14497.699999999999 15032.5 17891.600000000002 17886.899999999998 19513.9 36006.4 68364.5 128963.1 133335.3 True False 16670.94329856996 15812.828007850543 15481.601103752282 15961.023383715452 16634.95573866921 17741.235016782794 20256.5121429158 35288.22410552565 65491.3778089528 120820.34785701978 116935.90338210638 0.1425647967510461 0.13522645783288345 0.13239390688387404 0.13649377925922637 0.14225704217046056 0.15171760343622206 0.17322748238173244 0.30177407524031225 0.5600621871877063 1.0332185784054737 1.0 16.835358429786847 -9.27246651185329 0.5679660913655925 0.9694832238257783 0.10792655099849836 0.9757581864710326 0.05209037756924587 0.07928628591989184 0.058306494683146984 0.02566878798547779 0.017068626279077324 5.339904476202827e-10 9.27246651185329 -0.86155667282728 LKS(ph)EEQK ddPTM_A549_MK2206_60min_R1 1 LKSEEQK 7 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 LKS(1)EEQK 57.103 0.010034999999999999 11907000.0 4743.4 5794.9 6265.2 4408.7 8366.9 5952.6 5427.4 6163.0 7502.0 7695.4 8262.2 True False 5543.96995500426 6089.835657980866 7153.699569106354 5488.831697914064 7136.140093565409 6582.500180983909 6413.4883265964745 7036.624123395928 5802.808978232289 5957.003795312585 6210.467714880424 0.8926815514588023 0.9805760109483347 1.1518777485898404 0.883803273747434 1.14905034873091 1.0599040979171481 1.03269006796857 1.1330264396248313 0.9343594145620666 0.9591876278560254 1.0 12.600486207621401 -8.813224368999085 24.999994902775217 0.969003060596654 1.0369586393969308 0.11335925768760047 0.0880359284091774 161.0465891361204 77746.85005593667 0.014642341565662053 0.015587966991037393 1.5373601906868095e-09 8.813224368999085 0.0679555788002768 LKS(ph)IEER ddPTM_A549_MK2206_60min_R1 3 LKSIEER 7 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 LKS(1)IEER;LKS(1)IEER;LKS(1)IEER 77.37899999999999 0.0048109 36118900.0 13539.1 12030.099999999999 10112.2 8290.199999999999 11820.2 9729.2 8003.300000000001 8673.4 12674.2 13425.3 12523.3 True False 15824.169080785541 12642.380705288375 11546.262016011813 10321.299372161213 10081.464238124263 10758.73748627973 9457.396013606804 9902.881011173484 9803.513936538478 10392.515405724205 9413.41898450316 1.681022496378423 1.3430168917479284 1.2265747477106719 1.0964453392707423 1.0709673344744213 1.1429149710632556 1.00467173820437 1.0519962011120616 1.0414403048114094 1.1040107130929668 1.0 13.200503094344871 -2.0000000000026326 0.5274090741490087 1.0228068660325906 26.56784980306858 0.9528348433527462 0.04142572104792493 11.184426236855554 0.09883485176585052 0.005981816228708176 322.45686068242594 0.009999999999939384 2.0000000000026326 25.545042937035987 up LKS(ph)IEER ddPTM_A549_PD325901_60min_R1 2 LKSIEER 7 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 LKS(1)IEER;LKS(1)IEER 82.417 0.0041748 34255000.0 6105.0 6074.5 7253.200000000001 6927.9 8211.3 6718.9 6618.6 6845.9 8536.7 11349.5 12521.5 True False 6724.775105736536 6586.4194334596 7745.445769034818 7355.820648597527 7634.566615447166 6664.1835060441945 6870.474444836888 6709.353153995344 8177.93218617392 10632.890633082216 10981.434880328346 0.6123767229893607 0.5997776706993199 0.7053218321140952 0.669841485084469 0.695224868029167 0.6068590834137819 0.6256445100033649 0.6109723571747605 0.7447052480203206 0.9682605915306662 1.0 13.422778954792784 -9.961169596577813 0.6110843412274813 1.0000324700504328 0.6382500203470479 0.9044630475118295 0.04199115781966793 0.1696036173967841 0.12665165881413307 0.02874151860419158 0.01103926599676467 1.0935292481702429e-10 9.961169596577813 -0.3617824497033849 LKS(ph)LNANTDITSLAR ddPTM_A549_MK2206_60min_R1 2 LKSLNANTDITSLAR 15 1 Q92845-2;Q92845-3;Q92845 Q92845-2 KIFAP3 Kinesin-associated protein 3 1 LKS(1)LNANTDITSLAR;LKS(0.999)LNANT(0.001)DITSLAR 114.02 3.1949999999999997e-07 6478100.0 2288.5 2623.3 1987.0 2315.3 2949.0 3043.9 1992.9 1955.5 3481.8 3277.0 3415.8 True False 2674.7428515468323 2756.8147649797597 2268.786478295077 2882.548603937767 2515.2060065166775 3366.0034776227094 2354.984133484565 2232.698113467587 2693.1778592920805 2536.7234240246585 2567.562588715904 1.041743972786475 1.0737088852655798 0.8836343418719729 1.1226790017139932 0.979608449496294 1.3109723176431403 0.917206125309041 0.8695788462100197 1.0489239370943628 0.9879889336186859 1.0 11.326183729785685 -14.999999999576927 0.1635675069567158 0.8920116295743248 1.0404280642041568 0.015344127185743517 0.117495439751437 362.5943022167374 3.7961094640624538 13.01802469266591 0.17246305762501707 1.0000000009741618e-15 14.999999999576927 0.148416434629832 LKS(ph)LNANTDITSLAR ddPTM_A549_PD325901_60min_R1 1 LKSLNANTDITSLAR 15 1 Q92845-2;Q92845-3;Q92845 Q92845-2 KIFAP3 Kinesin-associated protein 3 1 LKS(0.999)LNANT(0.001)DITSLAR 64.76100000000001 0.0011114 14006000.0 2996.6 3128.0 2978.7 3254.2 4016.2 3936.3 3829.1 4042.9 4274.7 3408.8 4130.2 True False 3300.812626019673 3391.6075377169564 3180.8524943782054 3455.204543175573 3734.115967137834 3904.244077876107 3974.81849586392 3962.261187906306 4095.0492246696776 3193.5677862505518 3622.211583494959 0.9112699658573843 0.9363361193949085 0.8781520408338764 0.9538936264572799 1.030893938982687 1.0778619602637964 1.0973457525164063 1.0938790008736166 1.1305383824979358 0.8816624077959515 1.0 11.82265510525814 -6.757784488545162 2.4042022626250277 1.069517387718817 0.9111892922904588 0.44484784919849873 0.06559029100920977 0.1306420279732841 1.540992330924863 0.007372406525458782 0.01635066003074608 1.74668870328158e-07 6.757784488545162 -0.15832809542835835 LKS(ph)PFR ddPTM_A549_PD325901_60min_R1 1 LKSPFR 6 1 A0A494C0S1;Q92963-2;Q92963;Q92963-3 A0A494C0S1 RIT1 GTP-binding protein Rit1 1 LKS(1)PFR 41.448 0.042102 17498000.0 2099.3 2174.4 2128.5 2113.0 2458.4 2615.6 2287.6 2110.3 2157.0 2219.4 2203.6 True False 2312.4193905770217 2357.6443190574637 2272.9528097102816 2243.515211028821 2285.730465019584 2594.299420799417 2374.6558698227523 2068.2084110016763 2066.3487911695543 2079.2667052348274 1932.5711697713184 1.1965507023736937 1.2199521321310223 1.176128902916026 1.1608965538352187 1.1827406414688753 1.342408218325228 1.2287546802758864 1.0701848621939278 1.069222610525679 1.0759069253221176 1.0 10.916305829154004 -8.363366970684028 3.605328654727287 1.0339901985525195 1.215630241495543 0.7115780068903226 0.049264256343321405 0.0973699782475224 2.3540104322604085 0.008975433093137836 0.010969827662739568 4.331447245521049e-09 8.363366970684028 0.1816400429430236 LKS(ph)PQAVLQLGVNNEDSK ddPTM_A549_MK2206_60min_R1 2 LKSPQAVLQLGVNNEDSK 18 1 D6RJ90;Q9Y6G5 D6RJ90 COMMD10 COMM domain-containing protein 10 1 LKS(1)PQAVLQLGVNNEDSK;LKS(1)PQAVLQLGVNNEDSK 140.66 3.7540999999999995e-17 8390100.0 4321.8 4782.2 4130.3 4552.3 5717.200000000001 4535.0 4316.0 4561.4 6437.6 6615.7 6767.799999999999 True False 5051.214182134631 5025.593553572297 4716.038646855641 5667.613704360516 4876.207453529048 5014.890689910632 5100.161332791094 5207.992418701632 4979.493878734763 5121.208775196805 5087.168478222232 0.9929323559379805 0.9878960319648284 0.9270458934168646 1.1140998629440177 0.9585307572186194 0.9857921378816104 1.0025540444796517 1.023750725181727 0.9788340803045121 1.0066914035028123 1.0 12.312647159218587 LKS(ph)PQAVLQLGVNNEDSK ddPTM_A549_PD325901_60min_R1 2 LKSPQAVLQLGVNNEDSK 18 1 D6RJ90;Q9Y6G5 D6RJ90 COMMD10 COMM domain-containing protein 10 1 LKS(1)PQAVLQLGVNNEDSK;LKS(1)PQAVLQLGVNNEDSK 161.68 2.0686e-23 14261800.0 6728.3 7241.6 7394.7 7581.5 8947.2 8633.3 7794.700000000001 8296.6 8594.099999999999 8327.3 8945.400000000001 True False 7411.352062887334 7851.875046397414 7896.548809943442 8049.792036164225 8318.779538164343 8562.99326716149 8091.331573923502 8131.1178044432145 8232.91986378779 7801.512856854089 7845.172509562695 0.9447022425387631 1.0008543517464465 1.00654877892336 1.0260822214364456 1.0603692306350632 1.0914984032185173 1.0313771384964139 1.0364485668775254 1.0494249621346707 0.994434838411088 1.0 12.937589456005142 -5.215971350584353 1.2037458397672645 1.0325689395263502 0.8998663956045017 0.5171800922842221 0.02589103339668991 1.1759737752907358 1.3010740600937485 0.004226661970358291 0.19919960614936186 6.081751198798697e-06 5.215971350584353 -0.13270254392184855 LKS(ph)PSMAVPSPGWVASPK ddPTM_A549_MK2206_60min_R1 2 LKSPSMAVPSPGWVASPK 18 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 LKS(0.985)PS(0.014)MAVPS(0.002)PGWVASPK;LKS(0.959)PS(0.04)MAVPSPGWVASPK 76.889 0.00011924 9103000.0 3444.5 3905.0 3299.5 2929.5 5168.2 4840.0 3473.9 3523.2 5443.2 5571.7 5288.0 True False 4025.8473900603276 4103.747820396431 3767.418714209665 3647.2276315102545 4407.964626273144 5352.165587468018 4105.062663110053 4022.624389347479 4210.323891004265 4313.049100286293 3974.8436586245434 1.0128316320882502 1.032429995452071 0.9478155715722776 0.9175776319142934 1.1089655354642245 1.3465097113580773 1.0327607865036308 1.0120207824071927 1.059242640114607 1.0850864765279302 1.0 11.956682401068438 -6.765861045594248 24.972324611280342 1.056892867810858 0.9794435780310551 0.1946314483106485 0.09628207041895298 197.3674256691359 1114682.5833018362 0.015073311342081211 0.02919962635826908 1.7145057833321106e-07 6.765861045594248 -0.07744928977980292 LKS(ph)PSMAVPSPGWVASPK ddPTM_A549_PD325901_60min_R1 2 LKSPSMAVPSPGWVASPK 18 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 LKS(0.963)PS(0.036)MAVPSPGWVASPK;LKS(0.866)PS(0.131)MAVPS(0.002)PGWVASPK 88.79 1.8969999999999998e-06 15613600.0 5027.1 5122.7 5493.4 6558.3 6620.9 6325.8 6316.6 7163.8 7982.4 7277.299999999999 7762.2 True False 5537.447491244578 5554.4079071172155 5866.215158497746 6963.391296020024 6155.870824865016 6274.284782112302 6556.981669576146 7020.912389107616 7646.927487543747 6817.810036048215 6807.498608639918 0.8134335105432969 0.8159249419555799 0.8617284403191039 1.0229001423786193 0.9042779409535434 0.9216725764951501 0.9631998545330848 1.0313498088999737 1.123309445533848 1.001514716050799 1.0 12.732909067063954 -6.533688849710909 0.4917935594033661 1.0564897288395498 0.7704690558286932 0.6363854115817374 0.055920305254433776 0.812850836624453 0.2665608025618432 0.015250134720056064 0.10839465634050328 2.926248137529034e-07 6.533688849710909 -0.28602067301085665 LKS(ph)PSQDNTDSYFR ddPTM_A549_MK2206_60min_R1 2 LKSPSQDNTDSYFR 14 1 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LKS(0.896)PS(0.104)QDNTDSYFR;LKS(0.836)PS(0.164)QDNTDSYFR 135.09 1.461e-09 8013000.0 3193.0 3442.2 3284.5 3361.7 3994.0 3094.0 3066.7 2911.7 4459.9 4259.0 5008.3 True False 3731.900338644979 3617.3932771750547 3750.291488656357 4185.3166509124485 3406.487890819805 3421.4050263690187 3623.879693992226 3324.442391707273 3449.739770996827 3296.888941996036 3764.6008879518313 0.991313674336234 0.9608968878353353 0.9961989598044059 1.1117557413076826 0.90487358214303 0.9088360567832912 0.9626198903554511 0.8830796386269699 0.9163626832361749 0.8757605494243352 1.0 11.878281207329879 -6.824910722276527 24.999999999812346 0.9466787153372489 1.0098376432043623 0.3744543534726964 0.051858352806471275 69.34310836009992 27312.198245386568 0.007795343540631558 0.01473181971588069 1.4965432682095e-07 6.824910722276527 0.06315892786711341 LKS(ph)PSQDNTDSYFR ddPTM_A549_PD325901_60min_R1 2 LKSPSQDNTDSYFR 14 1 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LKS(0.958)PS(0.042)QDNTDSYFR;LKS(0.781)PS(0.218)QDNTDSYFR 117.29 9.314299999999999e-07 23630000.0 9233.2 9335.1 10219.3 10602.4 10948.6 10474.1 9892.7 9549.9 11437.3 10831.8 12700.9 True False 10170.547666877417 10121.801638536295 10912.843151643061 11257.286168202541 10179.60810661952 10388.80240227679 10269.172111993159 9359.41975274838 10956.630055282127 10147.878299433447 11138.769817638644 0.9130763839622565 0.9087001351359337 0.979717089975428 1.0106399856092028 0.913889798719042 0.932670534750233 0.9219305435086337 0.8402561419239852 0.9836481258398847 0.9110412070248471 1.0 13.443302287631965 -8.969192660848767 24.99842539292482 0.9927860043209665 0.9298154344833235 0.02911085826297577 0.04750875942773825 158.81850983460828 128873.29030993274 0.007329944932849596 0.007727627310105251 1.0735130769711492e-09 8.969192660848767 -0.06297056983764304 LKS(ph)PSQK ddPTM_A549_MK2206_60min_R1 3 LKSPSQK 7 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LKS(0.989)PS(0.011)QK;LKS(0.883)PS(0.117)QK;LKS(0.914)PS(0.086)QK 81.33800000000001 0.004311 125424800.0 23898.9 20352.9 16557.7 13177.2 23671.7 24360.6 24863.7 28836.1 23085.5 26489.7 28475.5 True False 27932.45004799328 21388.775675735345 18905.83083626896 16405.614591546997 20189.624287711376 26938.422522742454 29381.112449054228 32923.70548185254 17856.671109968203 20505.658372104353 21404.247466180626 1.3049956599561565 0.9992771626066402 0.8832747269503756 0.7664653764384091 0.9432531706434252 1.2585549931295643 1.3726767313579837 1.538185611705014 0.8342583002827965 0.9580181879556349 1.0 14.38560949348212 LKS(ph)PSQK ddPTM_A549_PD325901_60min_R1 4 LKSPSQK 7 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LKS(0.987)PS(0.013)QK;LKS(0.973)PS(0.027)QK;LKS(0.887)PS(0.113)QK;LKS(0.79)PS(0.21)QK 70.55199999999999 0.0059058 176986400.0 37427.299999999996 34759.9 29919.100000000002 27369.39 33448.799999999996 26051.2 23432.079999999998 25794.8 27684.8 34983.700000000004 42823.700000000004 True False 41226.891943478 37689.23876287968 31949.590044163913 29059.9350599054 31099.4716800956 25839.047664447833 24323.80062692618 25280.30247837085 26521.30413248536 32774.82321164443 37556.65638180066 1.09772530132517 1.0035301966109864 0.8507037932068457 0.7737625725911896 0.8280681689003043 0.6880018125620205 0.6476561805622583 0.6731244182488318 0.7061678724237322 0.8726768133578198 1.0 15.196781007074748 -5.6715020560053535 2.3483913113824517 0.8100554478514514 1.0929716704548622 0.5083407263636701 0.10127001996202427 0.2997442183526359 3.044733373532371 0.01976259129683036 0.1214092265740831 2.1305804810796764e-06 5.6715020560053535 0.28291622260341076 LKS(ph)PSQKQDGGTAPVASASPK ddPTM_A549_MK2206_60min_R1 4 LKSPSQKQDGGTAPVASASPK 21 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LKS(0.746)PS(0.248)QKQDGGT(0.006)APVASASPK;LKS(0.969)PS(0.03)QKQDGGT(0.001)APVASASPK;LKS(0.993)PS(0.007)QKQDGGTAPVASASPK;LKS(0.944)PS(0.049)QKQDGGT(0.004)APVAS(0.003)AS(0.001)PK 124.28 7.413700000000001e-16 94991100.0 4140.18 4688.429999999999 5360.76 4550.86 6638.099999999999 4757.429999999999 3303.32 3609.4 8305.9 7019.829999999999 6104.6 True False 4838.94116631731 4927.051061096349 6120.996377143992 5665.820904295868 5661.644283437896 5260.858084873552 3903.4904851333363 4121.043503323909 6424.6269117967995 5434.045527516326 4588.659341611077 1.0545435618714634 1.073745225847701 1.333940029419336 1.2347442864012215 1.2338340813615714 1.146491315484419 0.8506821262009007 0.8980931458461703 1.4001097997266265 1.1842338083891042 1.0 12.163856990865114 -7.491794542343707 22.89765559790147 1.1379037094887952 1.1907588538658571 0.03561995569723175 0.16137452957706963 1238.6916658363252 912459.1314298115 0.030754189432852734 0.04911367636608816 3.2225929870508155e-08 7.491794542343707 0.05285514437706196 LKS(ph)PSQKQDGGTAPVASASPK ddPTM_A549_PD325901_60min_R1 4 LKSPSQKQDGGTAPVASASPK 21 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LKS(0.524)PS(0.212)QKQDGGT(0.264)APVASASPK;LKS(0.974)PS(0.026)QKQDGGTAPVASASPK;LKS(0.989)PS(0.01)QKQDGGT(0.001)APVASASPK;LKS(0.875)PS(0.125)QKQDGGTAPVASASPK 179.64 1.1992999999999999e-36 201188200.0 5985.6 6099.4 6148.5 6229.15 7145.1 8346.9 8674.099999999999 8137.5 6989.5 7969.6 7939.4 True False 6593.253705634169 6613.417843846158 6565.774183934067 6613.910448073914 6643.252825256843 8278.925613805874 9004.197622149646 7975.191178754744 6695.7556216409885 7466.39809589956 6962.904132003263 0.9469114582994059 0.9498073962341693 0.942964897901741 0.949878143183778 0.9540922435974348 1.1890046820771012 1.293166967611127 1.1453828786897633 0.9616326025322692 1.072310914289644 1.0 12.765473444610862 -7.044575416917956 24.997312380415863 1.0354739457833995 0.9478390450004714 0.25465533096428905 0.10007175204416058 804.5179142392179 451161.8035329123 0.018034884192308552 0.031238395609740847 9.024529794098409e-08 7.044575416917956 -0.08763490078292802 LKS(ph)PVLSNTTTEPASTMSPPPAK ddPTM_A549_MK2206_60min_R1 2 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKS(1)PVLSNTTTEPASTMSPPPAK;LKS(0.998)PVLS(0.001)NTTTEPASTMSPPPAK 106.51 6.256499999999999e-11 8911300.0 2164.1 2119.19 2464.6 1895.86 2573.7 2259.1 2209.8 2058.78 3226.2 3177.3 2860.6 True False 2529.3471728348254 2227.047719207662 2814.1173399124555 2360.3457851083904 2195.1121393597728 2498.1564625307847 2611.292055885489 2350.618369749322 2495.4708511827534 2459.545723269315 2150.2340714563857 1.1763124798416298 1.0357233888026196 1.3087493018871252 1.0977157400867028 1.0208712476930433 1.1618067519685176 1.2144222299095195 1.0931918533674863 1.1605577663889093 1.143850223526329 1.0 11.07027800277833 -10.775430016495138 0.8148591151524709 0.9912459332333795 1.1410104964978007 0.0 0.08776188204219684 0.6990281313357195 0.7435745776016488 0.06837157551511731 0.013734584444562204 1.6771425737184466e-11 10.775430016495138 0.14976456326442122 LKS(ph)PVLSNTTTEPASTMSPPPAK ddPTM_A549_PD325901_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKS(0.998)PVLS(0.002)NT(0.001)TTEPASTMSPPPAK 125.74 9.997599999999999e-17 10613000.0 3544.3 3087.3 3339.5 3567.9 3926.2 3867.8 3642.3 4251.3 3746.4 3158.6 4089.1 True False 3904.1147268242457 3347.4776058802936 3566.1385520448594 3788.2810797111815 3650.4372566546917 3836.301919165005 3780.909719643035 4166.504486419668 3588.9518364569412 2959.165456949953 3586.166622940595 1.08865960155051 0.9334417381687132 0.9944151867435225 1.05635947183203 1.0179218202810096 1.069750048596265 1.0543039733448731 1.16182679850029 1.0007766547986168 0.8251611729416767 1.0 11.808226805915089 -4.9154094670119255 18.984061456597516 1.0190108208118964 3.8992514920341 0.06323006488217131 0.08079782974837557 421.98895784920103 95197.32197601086 0.00774205701584408 269.91074920016194 1.215039881175729e-05 4.9154094670119255 2.8802406712222037 LKS(ph)VEDEMDSPGEEPFYTGQGR ddPTM_A549_MK2206_60min_R1 2 LKSVEDEMDSPGEEPFYTGQGR 22 1 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 LKS(0.999)VEDEMDS(0.001)PGEEPFYTGQGR;LKS(0.965)VEDEMDS(0.035)PGEEPFYTGQGR 91.59899999999999 4.3778e-07 9410000.0 3213.3 3086.0 2878.4 2929.1 3425.9 2452.2 2809.6 3207.6 3402.3 3688.4 4052.4 True False 3755.626482357628 3243.064218628267 3286.60040217642 3646.729631492296 2921.954648262289 2711.690176361381 3320.0679519485334 3662.2871228630142 2631.6844823566685 2855.187878294949 3046.0772394497158 1.2329386903649544 1.0646690690004097 1.0789616099065682 1.197188825110387 0.9592516599448246 0.8902237084609375 1.0899487081123114 1.2022962108224868 0.8639585524207164 0.937332724632665 1.0 11.572736809402016 -5.305450740623239 0.3323886152974015 0.9463282313407697 1.3629358412971633 0.27095157547484994 0.10439761337411801 6.077250810693913 0.47131442096878445 0.037750931128658495 1.0125524643963464 4.949362453392078e-06 5.305450740623239 0.41660760995639357 LKS(ph)YKNK ddPTM_A549_PD325901_60min_R1 1 LKSYKNK 7 2 C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294 C9J352 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed 1 LKS(0.975)Y(0.025)KNK 47.198 0.012338 12570000.0 3115.0 3252.5 4242.0 4057.2 5335.6 5068.1 5046.7 4697.8 4575.7 4363.0 5618.3 True False 3431.2325068582 3526.5995896497425 4529.887629218234 4307.804029430258 4960.845862820734 5026.8270739231975 5238.754930160206 4604.098693647193 4383.399241425375 4087.5194354057594 4927.284717338082 0.6963739064609787 0.7157288023645919 0.9193476507007011 0.8742754430796335 1.0068112860140914 1.0202022741318046 1.063213358003471 0.9344089001892532 0.8896176074423123 0.829568346440918 1.0 12.266577123152823 -5.783698356699648 1.6597793599328414 0.9609248944467894 0.6703738153244848 0.6595942452898663 0.06698183371808873 0.1880726350537911 0.8878808602261424 0.009096284993688634 0.0634870881103394 1.6455142337225365e-06 5.783698356699648 -0.2905510791223046 LKSDNENDGYVPDVEMS(ph)DSESEASEK ddPTM_A549_PD325901_60min_R1 1 LKSDNENDGYVPDVEMSDSESEASEK 26 1 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 LKSDNENDGYVPDVEMS(0.961)DS(0.037)ES(0.002)EASEK 112.13 1.8157e-13 6353700.0 666.82 824.23 511.13 793.38 1189.2 851.88 868.95 687.81 867.95 942.92 915.52 True False 734.5150755130609 893.6907547354363 545.8183554743792 842.3852807032872 1105.6746945172833 844.9425717199141 902.0183677576856 674.0910899734929 831.4730798774294 883.3838702802656 802.9168439594469 0.91480840268704 1.1130551830602449 0.6797943766913265 1.0491563192885687 1.3770724861927643 1.0523413203703942 1.12342688354816 0.8395528068004255 1.0355656206901358 1.1002183811763238 1.0 9.649106769024733 LKSDNENDGYVPDVEMS(ph)DSESEASEKK ddPTM_A549_PD325901_60min_R1 1 LKSDNENDGYVPDVEMSDSESEASEKK 27 2 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 LKSDNENDGYVPDVEMS(0.842)DS(0.121)ES(0.019)EAS(0.019)EKK 63.805 0.00020241 9090100.0 1529.1 1744.7 2154.1 1850.3 2210.3 1807.0 1697.4 1494.4 2415.0 1736.9 2367.4 True False 1684.3331063360752 1891.7319920251828 2300.2901796555852 1964.5888286638078 2055.0561531210474 1792.2843911089403 1761.9954858529197 1464.5930196658792 2313.505948388723 1627.2318375787918 2076.2248081850694 0.8112479437178259 0.9111402505968701 1.1079196099512858 0.9462312659586954 0.9898042567545821 0.8632419688095648 0.8486535171464246 0.7054115786941937 1.1142848978917042 0.7837454938231065 1.0 11.0197469480565 LKSEDELR ddPTM_A549_PD325901_60min_R1 1 LKSEDELR 8 1 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCR2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 0 82.749 0.0035156 44431000.0 4848.1 5737.3 5416.8 5233.8 5922.3 6325.0 5757.6 6458.3 5661.8 5646.7 6876.0 False True 5340.275543017417 6220.8024060561 5784.416621864529 5557.079939177778 5506.3380788258555 6273.49129704707 5976.708618679613 6329.484140061665 5423.854235439864 5290.166398328147 6030.295590555266 0.885574423811236 1.0315916214454244 0.9592260503654519 0.9215269559723333 0.9131124662363085 1.0403289860073692 0.9911137072684162 1.0496142427868698 0.8994342240759775 0.8772648569024841 1.0 12.558013005954336 LKSIS(ph)REPS(ph)PALGPNLDGSGLLPR ddPTM_A549_PD325901_60min_R1 1 LKSISREPSPALGPNLDGSGLLPR 24 2 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 2 LKS(0.461)IS(0.551)REPS(0.988)PALGPNLDGSGLLPR 52.669 0.0020819000000000002 3861000.0 939.75 829.53 613.7 752.2 765.37 1038.0 809.45 861.83 1034.4 917.03 773.71 True False 1035.1527281926142 899.4374043357881 655.3493724778947 798.6616856298527 711.613051583159 1029.5468721478037 840.2540626980361 844.6401245574447 990.9277652228963 859.1285692986814 678.5485749517911 1.5255396096972995 1.3255313437209568 0.9658105501503048 1.1770147563666984 1.0487282382601968 1.5172780699170283 1.2383108501226072 1.2447747379286056 1.4603637849999151 1.2661268492970013 1.0 9.406308286676996 -11.066635774060545 1.39533648113988 1.0007745498329463 1.2893943847938565 0.013085881641473174 0.18629062339851982 0.47264316834437575 1.6494364562103125 0.12617256020397988 0.028246610702933165 8.577569111182876e-12 11.066635774060545 0.28861983496091015 LKSPVLSNTT(ph)TEPASTMSPPPAK ddPTM_A549_MK2206_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKS(0.003)PVLS(0.007)NT(0.109)T(0.428)T(0.402)EPAS(0.024)T(0.024)MS(0.002)PPPAK 59.18899999999999 0.0006542999999999999 5719000.0 782.15 944.55 1032.8 1124.2 1138.0 920.24 889.45 835.14 1175.3 1434.6 1416.6 True False 914.1577982684531 992.6235605007557 1179.2665700972104 1399.6290504672554 970.6017074994842 1017.6191859941256 1051.0515517727154 953.5236525089848 909.0964265684364 1110.5228636270292 1064.8191238289564 0.8585099363930054 0.9321992235933982 1.107480645028909 1.3144289195655732 0.9115179149011916 0.9556732812375629 0.9870705063910435 0.895479458595966 0.853756667422951 1.0429215993357894 1.0 10.05639267162318 LKSPVLSNTT(ph)TEPASTMSPPPAK ddPTM_A549_PD325901_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKS(0.001)PVLS(0.049)NT(0.049)T(0.425)T(0.425)EPAS(0.026)T(0.026)MSPPPAK 154.14 3.8013e-33 7478700.0 1083.1 1145.8 1484.0 1192.5 1378.9 1386.8 1134.1 1609.5 1275.7 1130.9 1049.4 True False 1193.0555146639224 1242.3605871854502 1584.713164016939 1266.1580166360009 1282.0508209467553 1375.506360592075 1177.258796103333 1577.397259871676 1222.08676536625 1059.494780999399 920.3304526946913 1.2963338452734046 1.3499070725605866 1.721895824893071 1.3757645560121803 1.393033140643082 1.494578775009179 1.2791696641748251 1.713946610430111 1.3278782222059784 1.1512112610174312 1.0 9.846008156231722 -9.974641450106724 0.7525639257541425 1.0194868084853255 1.4507317708855754 0.4566080648826407 0.15053604447006297 0.3195256480372014 0.3667603903294955 0.06754473666405857 0.03000876733705394 1.060128597290607e-10 9.974641450106724 0.4312449624002499 LKSPVLSNTTT(ph)EPASTMSPPPAK ddPTM_A549_PD325901_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNT(0.016)T(0.115)T(0.846)EPAS(0.015)T(0.007)MSPPPAK 158.67 2.5080999999999996e-33 10256000.0 1031.5 1322.9 1080.4 1454.9 1763.4 1367.8 1419.5 1478.6 1358.8 1425.3 1128.8 True False 1136.217120649834 1434.3854257179541 1153.72244097298 1544.7658686823627 1639.5448673997455 1356.6610902926443 1473.5198492802042 1449.1081630607387 1301.6943613542844 1335.3063147567796 989.96475605276 1.1477349205644645 1.4489257490713223 1.16541769181073 1.5604251153765667 1.656164886048091 1.37041352431777 1.4884568771473248 1.4637977303744627 1.314889599246411 1.3488422760432237 1.0 9.951233354186176 -9.998349020900749 0.7291463379341208 1.016777744468555 1.4183637642097098 0.11391192637135461 0.17446263909496085 0.37236874809871473 0.3985020441258484 0.073454253087561 0.03121214045779141 1.0038087548044338e-10 9.998349020900749 0.4015860197411547 LKSPVLSNTTTEPAS(ph)TMSPPPAK ddPTM_A549_MK2206_60min_R1 2 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTTEPAS(0.333)T(0.333)MS(0.333)PPPAK;LKSPVLS(0.001)NT(0.005)T(0.019)T(0.019)EPAS(0.91)T(0.04)MS(0.006)PPPAK 113.26 3.5933e-12 14042800.0 2460.0 3047.0 3240.3 2918.43 4224.200000000001 3560.3999999999996 2927.1000000000004 2999.9 4937.0 4213.3 4704.7 True False 2875.1878587743954 3202.079285210736 3699.8232640259366 3633.4454810133 3602.8257757639053 3937.159164797755 3458.9161810038954 3425.145011808444 3818.77738276897 3261.5126037360656 3536.393146885567 0.8130283425377967 0.905464735455317 1.0462137862936136 1.0274438757504112 1.0187854195274766 1.1133262059013813 0.9780915292322901 0.968541920975303 1.0798509170656245 0.9222709320677246 1.0 11.788062955187014 -5.5681987657620615 2.8015501491354358 1.033552206360205 0.8179264860486133 0.5810839555173548 0.05250991344366073 0.11002085205215825 1.5963191972824071 0.006088830334472025 0.03921119891469276 2.7027211128974063e-06 5.5681987657620615 -0.21562572031159166 LKSPVLSNTTTEPAS(ph)TMSPPPAK ddPTM_A549_PD325901_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTTEPAS(0.457)T(0.457)MS(0.086)PPPAK 134.97 7.002500000000001e-23 16712000.0 1727.6 2315.9 1900.7 2129.0 2577.4 2539.3 2468.4 2401.8 2494.5 2149.7 2187.5 True False 1902.9846802080986 2511.069020651756 2029.692931837598 2260.5034946901856 2396.3723155472962 2518.620782702233 2562.336312760309 2353.894214824349 2389.66483985742 2013.9675751299033 1918.4513677050095 0.9919379308971417 1.308904183302639 1.0579850842222098 1.1782959593051159 1.249118093837328 1.3128405677101889 1.335627452378718 1.2269762238696975 1.2456217968746897 1.0497881828191231 1.0 10.905726478083329 -10.690191373785337 0.9312747911483955 0.9988905054677217 1.217827346557518 0.33046233927661905 0.10152404402842259 0.4685935642370926 0.7169646057923734 0.06878118670864089 0.017711821811067438 2.0408384420083614e-11 10.690191373785337 0.21893684108979627 LKSPVLSNTTTEPASTMS(ph)PPPAK ddPTM_A549_MK2206_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTT(0.001)EPAS(0.263)T(0.263)MS(0.472)PPPAK 93.667 1.5418e-07 7913200.0 1156.1 1368.9 1322.5 1149.7 1870.2 1484.9 1318.3 1013.2 2025.4 2076.2 1507.6 True False 1351.2214160687324 1438.571162955358 1510.050386283462 1431.3765516119936 1595.0960574389599 1642.0311324031534 1557.8180456484026 1156.8242027948654 1566.6501338991852 1607.1849780164766 1133.2213123567246 1.1923720471322938 1.2694529720444516 1.3325291095550065 1.2631041580352957 1.4075768255025922 1.4489942207213462 1.3746812106883672 1.0208281384940199 1.3824750000872048 1.4182445745518717 1.0 10.14621392433774 -10.933490735236228 0.8203892073514557 0.9673050799390477 1.3079142291060042 0.0 0.16740594233092626 0.5562543982007254 0.5521898858321364 0.1305031213972975 0.020876572547294317 1.165491913902547e-11 10.933490735236228 0.3406091491669565 LKSPVLSNTTTEPASTMS(ph)PPPAK ddPTM_A549_PD325901_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTTEPAS(0.305)T(0.305)MS(0.389)PPPAK 107.75 5.1732e-11 15189000.0 2155.6 2057.5 1663.7 1988.3 2096.7 2388.8 2284.2 2162.8 2133.8 2065.5 2486.0 True False 2374.434925131153 2230.8927457968775 1776.608686640824 2111.1127752430693 1949.4350252223246 2369.346404804117 2371.126480962201 2119.661257316223 2044.1238064893819 1935.0839774995636 2180.237760052411 1.08907155386304 1.0232336980271586 0.8148692400401853 0.9682947492810693 0.8941387315369962 1.086737624774997 1.0875540844248113 0.9722156437035877 0.9375692155887819 0.8875564000198978 1.0 11.090269757528759 -5.523894111612043 24.99999940098961 0.9708825806297943 1.0726121424244743 0.19244395900257993 0.07772015931100763 35.145415777210104 865388.2280026911 0.010167157731562997 0.040049695047274445 2.9929942906132254e-06 5.523894111612043 0.10172956179468007 LKSPVLSNTTTEPASTMS(ph)PPPAKK ddPTM_A549_PD325901_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAKK 24 2 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTT(0.005)EPAS(0.055)T(0.042)MS(0.898)PPPAKK 101.3 2.6151e-11 9314500.0 2391.0 2395.2 2443.1 2534.1 3051.5 3258.9 1845.7 2741.1 3367.0 2590.2 2671.5 True False 2633.732559838831 2597.051909955131 2608.903457553764 2690.6256016413304 2837.1731671035054 3232.36059888485 1915.9391235057933 2686.4266101486496 3225.4966990579 2426.654329953704 2342.9224360337953 1.1241228131723098 1.1084668745379116 1.1135253209535325 1.1484057518336555 1.2109547987881324 1.3796276603833013 0.8177561041026955 1.1466135493142289 1.3766980286885495 1.035738227024559 1.0 11.194093478299049 -6.410631384908777 4.188875960427453 1.1693114127314412 1.1151034254522574 0.0 0.15367928523418786 1.0811758885247846 32.00909017949096 0.025020301578532942 0.06013402208095598 3.8847995530328374e-07 6.410631384908777 -0.054207987279183856 LKSS(ph)QPK ddPTM_A549_MK2206_60min_R1 1 LKSSQPK 7 1 H0Y3Z0;A0A0A0MSC0;F8WEA4;A0A0A0MSD9;A0A0A0MRC8;Q9NR82-2;Q9NR82;Q9NR82-7;Q9NR82-3;Q9NR82-6 H0Y3Z0 KCNQ5 Potassium voltage-gated channel subfamily KQT member 5 1 LKS(0.086)S(0.914)QPK 48.64 0.01577 303900000.0 13442.0 6605.0 4973.1 3775.5 5993.0 6215.7 5531.2 6546.4 5688.8 10110.0 16905.0 True False 15710.680974652616 6941.166287764004 5678.3603599442595 4700.497669488637 5111.437638879092 6873.441248352267 6536.1474429875125 7474.372247509179 4400.295883146874 7826.143978300053 12707.021945735221 1.2363778894649264 0.546246501926726 0.44686791163133643 0.36991339824247615 0.4022529952893182 0.5409167685162579 0.5143728775239268 0.5882080222595159 0.34628852471791927 0.6158912774150589 1.0 13.633338335341485 -10.927970770382922 1.156388197646801 1.0027960306754697 0.524099605153166 0.05107240190568829 0.25587241878087563 0.42755697361715067 1.0060387655578409 0.1647893062093626 0.03788410731074254 1.1804000782481066e-11 10.927970770382922 -0.47869642552230374 LKSVEDEMDS(ph)PGEEPFYTGQGR ddPTM_A549_MK2206_60min_R1 4 LKSVEDEMDSPGEEPFYTGQGR 22 1 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 LKS(0.003)VEDEMDS(0.997)PGEEPFYTGQGR;LKSVEDEMDS(0.995)PGEEPFY(0.003)T(0.001)GQGR;LKS(0.003)VEDEMDS(0.997)PGEEPFYTGQGR;LKS(0.002)VEDEMDS(0.998)PGEEPFYTGQGR 72.569 6.8033e-05 10070100.0 3466.7699999999995 5067.929999999999 5189.099999999999 4311.81 5873.200000000001 4709.85 4965.8 4431.81 7503.000000000001 7115.700000000001 6885.5 True False 4051.876021611101 5325.865990120792 5924.992407911921 5368.203643564506 5009.2600601809945 5208.243200854601 5868.021581643657 5060.032639348902 5803.582479828963 5508.258427931725 5175.640319867491 0.7828743442733747 1.0290255236007488 1.1447844211986538 1.037205700511651 0.9678532028109025 1.0062992941881914 1.1337769278746737 0.977663115407226 1.1213264680605837 1.0642660786893225 1.0 12.337521645660631 -7.5733887604635655 24.999286116815465 1.057302977757926 1.0035194160242629 0.10702047519154212 0.09111399030407057 235.98883698262577 116798.67105596694 0.01432554254825944 0.021248215832819998 2.6706147267774278e-08 7.5733887604635655 -0.053783561733663054 LKSVEDEMDS(ph)PGEEPFYTGQGR ddPTM_A549_PD325901_60min_R1 1 LKSVEDEMDSPGEEPFYTGQGR 22 1 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 LKSVEDEMDS(1)PGEEPFYTGQGR 124.79 3.6326e-16 9462100.0 3218.5 3142.0 3755.6 3855.5 3451.1 3463.9 3506.7 3578.9 3868.2 3625.0 4149.0 True False 3545.2397506655257 3406.7873668499574 4010.4776002574263 4093.6454785241904 3208.706641648667 3435.691146852384 3640.1493874398707 3507.5160319072647 3705.6330060278483 3396.116881353631 3638.6993026779805 0.9743151208060333 0.9362651550631451 1.102173405014761 1.125029890629155 0.8818279211165234 0.9442085924285669 1.0003985173385508 0.9639477571905519 1.01839495319127 0.9333326551205219 1.0 11.829207118347925 LKT(ph)PTKPPCQ ddPTM_A549_MK2206_60min_R1 2 LKTPTKPPCQ 10 2 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR70 Q96L91-4 EP400 E1A-binding protein p400 1 LKT(0.958)PT(0.042)KPPCQ;LKT(0.906)PT(0.094)KPPCQ 69.714 0.006488600000000001 42050000.0 4718.700000000001 5815.200000000001 5822.1 4639.700000000001 6983.4 5730.2 5336.4 4817.5 8227.9 7221.7 7213.700000000001 True False 5515.101198861283 6111.168841272555 6647.761326261584 5776.426708284047 5956.151110854044 6336.565960601081 6305.954804519553 5500.39537797499 6364.293787256389 5590.312954311525 5422.339202008296 1.0171073762443026 1.1270355124609568 1.2259951062816992 1.0653016148721581 1.0984467937099986 1.1686037565215728 1.1629583782187565 1.0143952956572293 1.1737173847219329 1.0309780974677896 1.0 12.404699650465608 -10.963763386370825 1.1506560419179623 0.9979614695235274 1.1235760200736542 0.26736091516671645 0.06366610418606035 0.4595709697704089 1.052147831054682 0.04721969825997893 0.010216932058031983 1.0870176945735604e-11 10.963763386370825 0.12561455055012682 LKT(ph)PTKPPCQ ddPTM_A549_PD325901_60min_R1 2 LKTPTKPPCQ 10 2 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR70 Q96L91-4 EP400 E1A-binding protein p400 1 LKT(0.985)PT(0.015)KPPCQ;LKT(0.5)PT(0.5)KPPCQ 83.617 0.0018017 79784000.0 6195.5 7439.9 7191.5 6658.4 8594.400000000001 7455.799999999999 7349.200000000001 7649.5 5945.1 6883.2 8267.900000000001 True False 6824.46259911396 8066.886483331319 7679.558436002579 7069.674245676428 7990.75899307042 7395.082436762609 7628.877827636552 7496.924721583341 5695.248121642154 6448.593577305737 7251.000714536342 0.9411752760460655 1.1125204369597348 1.059103251859718 0.9749929042902448 1.1020215426335649 1.0198705982661707 1.0521137878724334 1.0339158713022862 0.7854430506708798 0.8893384280569729 1.0 12.823964400654438 -8.65356722391065 10.363560532620701 0.898725833697264 1.0406646686666192 0.49276831057838066 0.0655249216666892 0.25867420974030797 23.27086584774927 0.014376610956302866 0.016299815768609702 2.2204079626218265e-09 8.65356722391065 0.14193883496935522 LKT(ph)T(ph)DEEFQSLK ddPTM_A549_MK2206_60min_R1 2 LKTTDEEFQSLK 12 1 Q13439-3;Q13439-4;Q13439;Q13439-5;H0Y6I0 Q13439-3 GOLGA4 Golgin subfamily A member 4 2 LKT(1)T(1)DEEFQS(0.001)LK;LKT(0.997)T(0.997)DEEFQS(0.006)LK 46.408 0.018731 252740000.0 6489.700000000001 6282.200000000001 5411.0 4898.3 7247.1 6500.1 7413.5 8188.0 12009.0 12121.2 12285.4 True False 7585.0027020683765 6601.937146554282 6178.361164597215 6098.383719893045 6181.061190175319 7187.936267582823 8760.436988101661 9348.674074698336 9288.980674432363 9383.012501460991 9234.596120209142 0.821368103524228 0.7149134689395342 0.6690450869937222 0.6603844543398322 0.669337468549229 0.7783703990965696 0.9486540476773182 1.012353323632589 1.0058892184904769 1.0160717782694417 1.0 13.172833150243054 -7.734973226639816 2.5378105673081413 1.0032616981086648 0.7030887637668524 0.919586881513395 0.04151365546664729 0.05299058841062947 0.7005036780333422 0.006614816751509337 0.009940458563077981 1.840885484768915e-08 7.734973226639816 -0.30017293434181247 LKT(ph)T(ph)DEEFQSLK ddPTM_A549_PD325901_60min_R1 2 LKTTDEEFQSLK 12 1 Q13439-3;Q13439-4;Q13439;Q13439-5;H0Y6I0 Q13439-3 GOLGA4 Golgin subfamily A member 4 2 LKT(0.994)T(0.994)DEEFQS(0.012)LK;LKT(0.999)T(0.999)DEEFQS(0.001)LK 46.408 0.018731 411700000.0 6834.6 6417.200000000001 6299.8 7020.5 8045.7 7315.7 8121.0 8971.8 7431.6 8027.4 7998.7 True False 7528.443560633407 6957.9999651653625 6727.342311774878 7454.140340287663 7480.597788158181 7256.123364712605 8430.049098981714 8792.850410759062 7119.2756960851475 7520.548594035349 7014.910607936934 1.0732059154275526 0.9918871891671462 0.9590061353259883 1.0626137319346263 1.0663853335057971 1.0343857206822784 1.2017329329105975 1.2534515266396267 1.014877607710372 1.0720804603734104 1.0 12.77620900414407 -4.8506513608665935 17.052028877152022 1.0396795657896056 12.882627021093155 0.0 0.08803856626668849 919.7483657781894 104917.52707629344 0.012818453555742078 390.05373888100024 1.4104205892061586e-05 4.8506513608665935 11.84294745530355 LKTEEGEIDYS(ph)AEEGENR ddPTM_A549_MK2206_60min_R1 2 LKTEEGEIDYSAEEGENR 18 1 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 LKTEEGEIDYS(1)AEEGENR;LKTEEGEIDYS(1)AEEGENR 128.52 5.4388e-13 32777000.0 9339.7 10740.5 10714.0 10518.2 13747.4 10634.9 10125.0 10285.1 15459.0 13887.599999999999 17149.2 True False 10916.01302625822 11287.14557361534 12233.406305210601 13095.159472179947 11725.175671070661 11760.278059124716 11964.581439877162 11743.044421797735 11957.56118295028 10750.381514642908 12890.580346158098 0.8468209136535597 0.8756119019093935 0.9490190493135275 1.015870435661403 0.9095925362712802 0.9123156400502745 0.9281646844894055 0.910978722947693 0.9276200808533888 0.8339718791518138 1.0 13.654029596210753 LKTEEGEIDYS(ph)AEEGENR ddPTM_A549_PD325901_60min_R1 1 LKTEEGEIDYSAEEGENR 18 1 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 LKTEEGEIDYS(1)AEEGENR 152.35 4.6449999999999996e-18 25018000.0 7315.8 7401.0 7640.1 7627.0 8806.0 7022.1 7502.7 7203.7 7215.3 8089.1 8566.4 True False 8058.494630392688 8024.708243811756 8158.6031296535175 8098.102467826228 8187.4969390507895 6964.914345769831 7788.2193541349725 7060.016552306675 6912.066032881637 7578.352845505554 7512.78710688374 1.0726371605830454 1.0681399765020572 1.085962241919252 1.0779092169943403 1.089808192694404 0.927074632447403 1.0366617931977418 0.9397333442122691 0.9200401840947042 1.0087272190319005 1.0 12.87513250522969 -7.2536964081643935 24.995495126565903 0.9634901614652658 1.078632327128234 0.7051420327002583 0.03416139464489653 258.5007085485666 834479.6959938583 0.005480312951289284 0.00938142798626399 5.575753835909065e-08 7.2536964081643935 0.11514216566296831 LKTEEGEIDYS(ph)AEEGENRR ddPTM_A549_MK2206_60min_R1 2 LKTEEGEIDYSAEEGENRR 19 2 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 LKTEEGEIDYS(1)AEEGENRR;LKTEEGEIDYS(1)AEEGENRR 170.55 9.218700000000001e-35 190447000.0 7793.7 7573.799999999999 7964.3 6628.6 10036.0 7670.2 7572.9 7264.4 10982.3 10810.3 11343.4 True False 9109.08602232927 7959.274069684635 9093.757498281575 8252.607297569166 8559.717694608808 8481.85547293331 8948.797904794645 8294.15094629196 8494.82658512936 8368.245721920579 8526.520718086538 1.0683239182198887 0.9334726710745388 1.0665261715709913 0.9678751240307967 1.0038933789783506 0.9947616094970034 1.049525146383843 0.9727474101714579 0.9962828762158581 0.9814373293164907 1.0 13.057741448627025 -4.786482112352514 8.05745396773423 0.9993258274632488 4.693022691596797 0.25489774069974724 0.03495455371454943 17975.12480827385 10130.25921981644 0.003948069691151797 1190755.3083259657 1.6350004918660532e-05 4.786482112352514 3.693696864133548 LKTEEGEIDYS(ph)AEEGENRR ddPTM_A549_PD325901_60min_R1 6 LKTEEGEIDYSAEEGENRR 19 2 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 LKTEEGEIDYS(1)AEEGENRR;LKTEEGEIDYS(1)AEEGENRR;LKTEEGEIDYS(1)AEEGENRR;LKTEEGEIDYS(1)AEEGENRR;LKTEEGEIDYS(1)AEEGENRR;LKTEEGEIDYS(1)AEEGENRR 180.9 9.0345e-44 379907000.0 33912.600000000006 35587.0 34435.8 37599.7 39211.3 37567.9 36940.399999999994 35865.4 39736.899999999994 38089.7 40188.5 True False 37355.38218686338 38586.04138258738 36772.820467287434 39922.148073885626 36457.233559641405 37261.95947799757 38346.18713656249 35150.036461137985 38066.89628179208 35684.70984157111 35245.56927589154 1.0598603726459026 1.0947770790861013 1.0433317214836577 1.1326855798919648 1.0343777759486683 1.0572097498645103 1.0879718479335732 0.9972895085335194 1.0800477070980483 1.0124594544704928 1.0 15.105154287118667 -14.99999999994295 0.25360275391543846 0.565028704539309 1.074101797423277 0.332496652035123 0.03312726544469225 33.764297042493475 0.43593792162852557 7.401117418171086 0.01552776715488172 1.0000000001313612e-15 14.99999999994295 0.509073092883968 LKTEKEPDATPPS(ph)PR ddPTM_A549_MK2206_60min_R1 4 LKTEKEPDATPPSPR 15 2 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 LKTEKEPDATPPS(1)PR;LKTEKEPDAT(0.003)PPS(0.997)PR;LKTEKEPDAT(0.016)PPS(0.984)PR;LKTEKEPDAT(0.007)PPS(0.993)PR 88.945 7.3458e-06 218984000.0 9702.64 10749.45 10481.470000000001 9507.51 13825.800000000001 10007.660000000002 11440.31 10034.0 15642.699999999997 15302.800000000001 16272.8 True False 11340.208425227162 11296.551090386798 11967.900054683198 11836.850376808346 11792.043134926516 11066.66393865294 13518.866241228761 11456.350227836232 12099.653426258894 11845.88685174382 12231.814653567595 0.9271076080211547 0.9235384454662242 0.9784239210322384 0.967710083258656 0.964046911182323 0.9047442470382087 1.1052216391527627 0.936602667086262 0.9891952885935731 0.9684488513966149 1.0 13.578350830634449 LKTEKEPDATPPS(ph)PR ddPTM_A549_PD325901_60min_R1 6 LKTEKEPDATPPSPR 15 2 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 LKTEKEPDAT(0.004)PPS(0.996)PR;LKTEKEPDAT(0.01)PPS(0.99)PR;LKTEKEPDAT(0.01)PPS(0.99)PR;LKTEKEPDATPPS(1)PR;LKTEKEPDAT(0.005)PPS(0.995)PR;LKTEKEPDAT(0.001)PPS(0.999)PR 109.89 9.851799999999998e-07 285908600.0 9055.3 9033.3 8474.61 9562.3 10833.4 8569.7 9354.1 10767.1 11179.2 10528.4 11156.2 True False 9974.587389840475 9794.567893369107 9049.747996569806 10152.94155344103 10072.499357201088 8499.911204474984 9710.075394259924 10552.341743873447 10709.377100715208 9863.635027212014 9784.058124978565 1.0194734395920535 1.001074172726316 0.9249483068243355 1.0377024976497953 1.0294807357579099 0.8687510944742681 0.9924384412098122 1.0785240243957122 1.0945741494906205 1.008133322719158 1.0 13.256217259292844 -8.136318534508083 6.422082344200431 1.0483222602402518 0.9794357773099922 0.2533065458133421 0.05242469357467576 0.2649607007224439 12.882150420616403 0.009125494015448203 0.011816654583860423 7.306030240793659e-09 8.136318534508083 -0.06888648293025956 LKTEKEPDATPPSPR ddPTM_A549_MK2206_60min_R1 2 LKTEKEPDATPPSPR 15 2 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 0 ; 53.328 0.0059881 7085900.0 3012.0 3502.6 3596.5 2948.1 4404.700000000001 3619.3999999999996 3064.1 3116.7 4026.7999999999997 4687.200000000001 4182.700000000001 False True 3520.351963670115 3680.867379185798 4106.537780165197 3670.3846323452394 3756.7744648708067 4002.4025056367263 3620.8073076471715 3558.5017694934418 3114.7362294782442 3628.3582645982206 3144.020153352662 1.1196976456770313 1.1707518398890233 1.306142320934598 1.167417654251129 1.1948951602185907 1.2730206265913144 1.1516488861517258 1.1318317300538905 0.9906858345538305 1.1540505746215015 1.0 11.618394750047651 -8.555304191233864 2.060800366566436 0.9943000783528414 1.2038484120939057 0.41623797236518667 0.06964697230366466 0.10081066477563798 0.8456965941365969 0.008771917003527294 0.010181018355105462 2.7841703796370695e-09 8.555304191233864 0.2095483337410643 LKTEKEPDATPPSPR ddPTM_A549_PD325901_60min_R1 2 LKTEKEPDATPPSPR 15 2 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 0 ; 52.823 0.0062998 6730600.0 3027.0 3195.8 3319.4 2776.0 3786.2 3107.6 3248.4 3351.5 3761.7 3758.9 3487.3999999999996 False True 3334.2988116403776 3465.121281661075 3544.6744451737377 2947.4672152465714 3520.270373680911 3082.292735921494 3372.019639592687 3284.651703299114 3603.6088306641245 3521.562412502115 3058.471908450033 1.090184546873974 1.132958348280898 1.1589691032899176 0.9637058320212867 1.1509899319182917 1.0077884735202727 1.1025177737537413 1.073951895462628 1.1782383289864367 1.1514123777866465 1.0 11.578595309887353 -11.126376363001173 1.5001885457827027 1.0002598715766322 1.104889951102684 0.0 0.07579258729410102 0.43424376060098785 1.756722572039231 0.044618653689002655 0.00972359244506704 7.475214118192436e-12 11.126376363001173 0.10463007952605174 LKTS(ph)LGK ddPTM_A549_MK2206_60min_R1 2 LKTSLGK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LKT(0.226)S(0.774)LGK;LKT(0.07)S(0.93)LGK 77.66199999999999 0.004775100000000001 78628000.0 11167.0 11457.0 12493.3 11512.6 15491.5 12127.3 12204.5 11559.4 17207.2 15290.5 17613.800000000003 True False 13051.716593062472 12040.112363196402 14265.037800344184 14333.187516820259 13212.720871465957 13410.602836549775 14421.899672393181 13197.980349177818 13309.796674252022 11836.365430286542 13239.807343850409 0.9857935432213596 0.9093872781153997 1.0774354512771647 1.0825827857289556 0.997954164159569 1.0129001493952023 1.089283197092126 0.9968408154600514 1.005286280123564 0.8939983130331776 1.0 13.692594508787192 -5.750216764360685 24.997671962749063 1.017428399305989 0.9475904235578528 0.1971691542368642 0.05430368537308921 198.2862689314329 441661.48576489586 0.005532484104961653 0.02104545496384128 1.7773920595555202e-06 5.750216764360685 -0.0698379757481361 LKTS(ph)LGK ddPTM_A549_PD325901_60min_R1 2 LKTSLGK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LKT(0.152)S(0.848)LGK;LKT(0.089)S(0.911)LGK 80.688 0.004393 158580000.0 11654.5 10910.599999999999 12006.3 12175.4 13833.3 12301.8 12755.2 12156.099999999999 12953.9 11386.2 13334.9 True False 12837.656260410555 11830.074552754026 12821.119717747028 12927.446805660347 12861.696730294263 12201.618219448788 13240.606115913259 11913.637049224037 12409.492631400697 10667.273388818954 11694.791836895774 1.097724221128004 1.011567774591032 1.0963102119781059 1.1054020444276471 1.0997798772028615 1.0433377857102195 1.1321797173114798 1.0187130489691856 1.0611127418489075 0.9121387996975616 1.0 13.513578562013548 -10.188773166841159 0.4493081569132687 0.9911770076018449 1.080021717076485 0.46789610639639656 0.04441458832760745 1.0215425621541028 0.3554266212437081 0.0394467537016332 0.009967500920381794 6.474807083374515e-11 10.188773166841159 0.08884470947464007 LKVPEWVDTVK ddPTM_A549_MK2206_60min_R1 2 LKVPEWVDTVK 11 1 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 ; 87.001 0.00031216 2229000.0 1728.3899999999999 1529.46 1788.8 1628.2 2661.2 1670.71 1695.11 1688.35 2823.6000000000004 2586.8 2659.4 False True 2020.099976921578 1607.3029811481508 2042.4787379840122 2027.1090730926755 2269.741005270323 1847.5034232724581 2003.0895451407575 1927.6787828550237 2184.0591083626614 2002.4400833893744 1998.9975842938923 1.0105564873081825 0.8040544889982445 1.0217514788570787 1.0140627927815697 1.1354395938762807 0.9242149354197712 1.0020470063991151 0.9643227175464243 1.0925771624352105 1.0017221126841422 1.0 10.965061013308246 -5.897597279565623 10.33539623913617 1.0318679475571937 0.907523374724697 0.2466836599869513 0.07072351211638431 0.2706191806090877 25.322569071336844 0.009394825121399757 0.029274633656378793 1.265909678973694e-06 5.897597279565623 -0.12434457283249667 LKVPEWVDTVK ddPTM_A549_PD325901_60min_R1 1 LKVPEWVDTVK 11 1 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 86.02799999999999 0.00038105 4097000.0 1678.2 1865.2 1675.5 1745.7 2076.7 1991.0 1822.0 1816.4 1883.0 1763.2 2156.5 False True 1848.5696285744575 2022.386949919969 1789.2095055999878 1853.5279242276442 1930.8397562260686 1974.7859561139453 1891.3372070366568 1780.1704770617653 1803.864058308889 1651.8712510904045 1891.2641711798183 0.9774253944763693 1.0693307580920084 0.946038915591487 0.9800470777550694 1.0209254664944887 1.044161881881379 1.000038617480282 0.9412595575959386 0.9537874643834622 0.8734217441765026 1.0 10.885135177210776 -8.022396487364391 24.40314646894872 0.9746012176203519 1.0072637997504073 0.20567915122018443 0.04593201137400441 818.562017611868 891900.985310299 0.005751046618398398 0.007454039678230185 9.497373389421884e-09 8.022396487364391 0.03266258213005535 LLAAGS(ph)PLAHSR ddPTM_A549_MK2206_60min_R1 2 LLAAGSPLAHSR 12 0 Q8IZN3-2;Q8IZN3 Q8IZN3-2 ZDHHC14 Probable palmitoyltransferase ZDHHC14 1 LLAAGS(1)PLAHSR;LLAAGS(1)PLAHSR 115.91 7.771799999999999e-06 11494300.0 768.61 719.85 586.6 483.86 690.81 544.99 631.39 502.0 1094.21 895.85 831.9300000000001 True False 898.3325772896706 756.4872902720543 669.7887006380939 602.4057217213006 589.1927641104731 602.6604800649167 746.1053901554609 573.1600373105232 846.3731820943149 693.4768628051536 625.3388209000595 1.4365533487856823 1.209723856873672 1.0710812734671693 0.963326922282306 0.9421976445704093 0.9637343147791438 1.193121816876138 0.916559180646366 1.3534633606724067 1.1089617973933266 1.0 9.288494272003014 -5.34283933072448 2.773374180194512 1.1085181994481481 1.4684797271297572 0.3841401161077368 0.1305954498656729 0.38832513324191437 4.4293889877007055 0.022969943758893285 0.2872973139743715 4.54109585543669e-06 5.34283933072448 0.35996152768160905 LLAAGS(ph)PLAHSR ddPTM_A549_PD325901_60min_R1 3 LLAAGSPLAHSR 12 0 Q8IZN3-2;Q8IZN3 Q8IZN3-2 ZDHHC14 Probable palmitoyltransferase ZDHHC14 1 LLAAGS(1)PLAHSR;LLAAGS(1)PLAHSR;LLAAGS(1)PLAHSR 110.98 2.2594e-05 13911600.0 1185.17 1211.92 1233.26 979.51 1534.15 1525.13 1062.3 984.5799999999999 926.95 1194.1399999999999 1196.8600000000001 True False 1305.4875859239592 1314.05275163361 1316.9564397948322 1040.012108071387 1426.3965965301804 1512.7098469352409 1102.7264078128653 964.9417795119323 887.993515055456 1118.741796606793 1049.6538075206474 1.2437315775642335 1.2518915686472767 1.254657898022179 0.9908144005383692 1.358920995008273 1.4411512025172974 1.050562004264605 0.9192952691623054 0.8459870375290269 1.0658197860962713 1.0 10.035697867289297 -7.972797598034084 6.690293572044385 0.9271930395473452 1.249696185189364 0.5965305929154687 0.11559632805086971 0.08444366020634178 13.004338165586967 0.018299404151488823 0.025158448778705052 1.0646390752672718e-08 7.972797598034084 0.32250314564201876 LLAAS(ph)GSNSPTRS(ph)ESPEPAATCSLPSDLTR ddPTM_A549_PD325901_60min_R1 1 LLAASGSNSPTRSESPEPAATCSLPSDLTR 30 1 Q9NS37;E9PIM0 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 2 LLAAS(0.337)GS(0.337)NS(0.32)PT(0.1)RS(0.559)ES(0.341)PEPAAT(0.003)CS(0.002)LPS(0.001)DLTR 67.209 0.00016484 7475200.0 1394.5 1815.2 1242.8 1688.6 2358.7 1825.4 1887.8 2130.8 1698.0 2105.6 1998.5 True False 1536.068613423358 1968.1732744449537 1327.1438815635129 1792.9009869111526 2193.0330490732563 1810.5345476094406 1959.6412620437968 2088.299522419738 1626.6389649540586 1972.6520566560566 1752.6971695352963 0.8764027466482562 1.1229397232191503 0.7572009042014868 1.0229382565765857 1.2512332918610858 1.03299907084889 1.1180717902131199 1.191477660098819 0.9280775899155127 1.1254950889086437 1.0 10.775361033896722 -3.9425456004758956 9.754085548678198 1.0047342055674704 0.6194489305753517 0.0 0.1420008639322665 0.0 0.0 0.01776883083909327 0.0 0.00011414434479333112 3.9425456004758956 -0.38528527499211873 LLAEPVPGIK ddPTM_A549_PD325901_60min_R1 1 LLAEPVPGIK 10 0 F8VSD4;F8VV71;P61088;Q5JXB2;F8VZ29 F8VSD4 UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like 0 130.75 3.2958e-06 2558700.0 2516.9 2854.0 2442.2 2496.4 2812.3 3175.6 3011.2 2616.8 3327.6 2854.2 3312.5 False True 2772.413835156149 3094.51659611387 2607.9423781416235 2650.596958264243 2614.7737499083055 3149.7389664668235 3125.792863791866 2564.605871160114 3187.7525440407103 2673.9853248991794 2905.0834996675835 0.9543318928606991 1.0652074532342917 0.8977168396158112 0.9123995776945962 0.9000683629945587 1.0842163286622346 1.0759735009852684 0.8827993658198021 1.0973015214211472 0.9204504191377467 1.0 11.50436391570156 -7.262231778144403 24.99993061693851 1.038315996574105 0.9480275694815308 0.08842173629897787 0.07770663716448716 76.23351797697185 2405161.1214391426 0.010804553221138232 0.017894051797980856 5.467241044340891e-08 7.262231778144403 -0.09028842709257412 LLAS(ph)PSSR ddPTM_A549_MK2206_60min_R1 2 LLASPSSR 8 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 LLAS(1)PSSR;LLAS(0.927)PS(0.067)S(0.005)R 163.69 2.6267999999999996e-16 46327000.0 6371.7 7642.9 6621.9 6369.1 9630.2 7183.5 6156.2 7577.1 11213.0 10697.0 10395.0 True False 7447.087186891394 8031.890964534673 7560.984992764052 7929.529785919761 8213.610337048798 7943.653201978624 7274.7018528564795 8651.17712889555 8673.273403481566 8280.540270610849 7813.634612594949 0.9530887424512133 1.0279327563625655 0.9676655446079284 1.0148324280659347 1.051189458463942 1.0166399628124527 0.9310266237853311 1.1071898748567728 1.1100177873048924 1.0597552459470378 1.0 12.931778077306477 -8.27242894275986 24.95972427567374 1.057547243144326 0.998668717630773 0.39903421178303655 0.043008816224183226 825.9562304495302 1875926.1286775963 0.00864637767422632 0.010499935487380098 5.3403664301442395e-09 8.27242894275986 -0.05887852551355299 LLAS(ph)PSSR ddPTM_A549_PD325901_60min_R1 4 LLASPSSR 8 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 LLAS(0.871)PS(0.129)SR;LLAS(0.96)PS(0.04)SR;LLAS(0.997)PS(0.003)SR;LLAS(0.968)PS(0.032)SR 137.13 0.0010871 185901000.0 11535.3 11865.9 10659.0 11080.099999999999 12322.0 11346.7 11864.2 12206.0 12417.5 11624.400000000001 13475.9 True False 12706.355164160963 12865.881036379664 11382.383837773965 11764.492612267124 11456.545228592295 11254.296237186394 12315.698623339356 11962.541754578237 11895.635658019452 10890.433400167483 11818.44973076842 1.0751287566152563 1.0886267936550373 0.9631029531852058 0.9954345011629722 0.9693780055404446 0.9522650172879024 1.0420739524978804 1.012192125624961 1.006530968867269 0.9214773213287935 1.0 13.52875318389609 -5.749176268652719 24.98739463771729 0.9982040118482407 1.08187782752189 0.5278745210280473 0.03350980370943944 102.6597914021896 209176.17026220873 0.0033156917352400997 0.01265147275557817 1.7816554937996455e-06 5.749176268652719 0.0836738156736494 LLASQGSQGAPLLS(ph)TPK ddPTM_A549_PD325901_60min_R1 2 LLASQGSQGAPLLSTPK 17 0 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 LLASQGSQGAPLLS(0.642)T(0.358)PK;LLASQGSQGAPLLS(0.649)T(0.351)PK 160.47 2.5617e-22 15139100.0 5542.700000000001 4505.2 5480.1 4931.1 6785.9 5970.5 5464.7 5564.5 5819.700000000001 6086.5 5745.200000000001 True False 6105.390823679917 4884.869015000775 5852.0125405183535 5235.682847659358 6309.281794084118 5921.878227512969 5672.662148898579 5453.511682234196 5575.118247551907 5702.197351271409 5038.576821823456 1.2117292321982265 0.9694938050449226 1.161441563254863 1.0391193848592686 1.2521952164660644 1.175307718215924 1.1258461167702607 1.0823515994860977 1.1064867014440551 1.1317079312105813 1.0 12.298800577505983 -10.28204318994202 0.5802518123658198 0.9934606935548407 1.1272170114875188 0.0 0.08338435984701406 0.9339703029661593 0.5515227031981276 0.061724672828146344 0.0165051424846553 5.2234424005618e-11 10.28204318994202 0.13375631793267817 LLASQGSQGAPLLST(ph)PK ddPTM_A549_MK2206_60min_R1 2 LLASQGSQGAPLLSTPK 17 0 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 LLASQGSQGAPLLS(0.128)T(0.872)PK;LLASQGSQGAPLLS(0.132)T(0.868)PK 166.35 4.2419e-23 10094200.0 2471.4 3179.5 2956.6000000000004 3121.1 4506.2 3580.5 2990.3999999999996 2892.9 4919.1 3955.5 4380.6 True False 2888.5119000711557 3341.322969257481 3375.89033806101 3885.769640111504 3843.3439493270425 3959.386133456456 3533.716971635423 3302.977434134687 3804.9317041885456 3061.949802785942 3292.77612159052 0.8772269335687204 1.0147434401472493 1.0252413809507168 1.1800892306746165 1.1672047559281316 1.202446199574583 1.073172557485785 1.003098088715257 1.155539144990713 0.9298991761720257 1.0 11.68508870997191 -5.354337896126056 1.6441893269717485 1.090564633988759 0.8290860764109237 0.348445744184565 0.08283518245492584 0.6701969265966043 1.9787574867150621 0.011523627625109237 0.26112346754786314 4.422441572259708e-06 5.354337896126056 -0.2614785575778352 LLASQGSQGAPLLST(ph)PKR ddPTM_A549_MK2206_60min_R1 2 LLASQGSQGAPLLSTPKR 18 1 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 LLASQGSQGAPLLS(0.138)T(0.862)PKR;LLASQGSQGAPLLS(0.203)T(0.797)PKR 166.69 5.9773e-24 62315000.0 3669.0 4382.0 4540.7 4533.200000000001 5844.7 4133.3 3929.7000000000003 4106.9 6204.4 5131.6 5902.0 True False 4288.237501562303 4605.025082964701 5184.639537994189 5643.8342035030855 4984.952372427272 4570.683062537512 4643.675623139287 4689.065651853761 4799.113306390886 3972.367995949018 4436.370513086618 0.9666094139145174 1.0380163400195221 1.168666936789948 1.272173770620518 1.1236555553063976 1.0302753228240726 1.0467285384395082 1.056959881511639 1.0817656668292766 0.8954094308018541 1.0 12.115164144992752 -7.257333651895749 23.057668643671676 1.0411950336500246 1.121456847925075 0.20917966351252393 0.08575022118326044 160.44449569523118 901046.2910645196 0.011847019539826267 0.020032042333937895 5.529251546788449e-08 7.257333651895749 0.08026181427505041 LLASQGSQGAPLLST(ph)PKR ddPTM_A549_PD325901_60min_R1 2 LLASQGSQGAPLLSTPKR 18 1 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 LLASQGSQGAPLLS(0.146)T(0.854)PKR;LLASQGSQGAPLLS(0.155)T(0.845)PKR 206.34 1.2889999999999997e-49 110103000.0 9619.8 9602.6 10605.1 9809.0 13014.2 11820.2 10730.6 11024.5 11884.5 10455.8 11886.1 True False 10596.395014277536 10411.844802327627 11324.825859646933 10414.879652144671 12100.12748855266 11723.940210174827 11138.958855009634 10804.607698947057 11385.035794462025 9795.619003602013 10424.18505219589 1.0165202326339524 0.9988161904449631 1.0863991576263625 0.9991073258960174 1.1607744325302176 1.1246865008123719 1.0685687945134066 1.0364942338270395 1.0921751424648518 0.9397011809127979 1.0 13.347646979803324 -5.747114024860368 24.953634286768203 1.0579479203199866 1.0076681868463557 0.09126853067923146 0.05919195094883257 395.0863471221009 688197.3919416493 0.0073691936446156365 0.028269833258203935 1.7901357886988763e-06 5.747114024860368 -0.050279733473630905 LLASS(ph)PALPSSGAQAR ddPTM_A549_MK2206_60min_R1 1 LLASSPALPSSGAQAR 16 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LLAS(0.08)S(0.92)PALPSSGAQAR 225.29 7.4262e-55 9821300.0 1809.7 2139.8 2926.6 2266.0 3199.4 2348.9 2228.1 2377.0 3302.9 3137.6 4505.3 True False 2115.133117082938 2248.7066801752326 3341.635886954389 2821.170101724604 2728.772498219552 2597.4590389263694 2632.916929006449 2713.9470292571996 2554.7984236474836 2428.813980842161 3386.5096700456047 0.6245761338854983 0.6640189750720393 0.986749252929016 0.8330612862790415 0.8057772645258103 0.7670018077613788 0.777472142570611 0.8013994624798021 0.7544045854187917 0.7172027300927368 1.0 11.725583399984615 -10.76438472078307 0.8126341987606671 1.0131309947911007 0.7825284663162879 0.0 0.12112586529279117 0.5531287841958472 0.587568451362277 0.08290063878342618 0.016865397418691655 1.7203439290848485e-11 10.76438472078307 -0.23060252847481277 LLASS(ph)PALPSSGAQAR ddPTM_A549_PD325901_60min_R1 2 LLASSPALPSSGAQAR 16 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LLAS(0.093)S(0.907)PALPSSGAQAR;LLAS(0.097)S(0.903)PALPSSGAQAR 187.08 3.3577999999999994e-34 34474000.0 9691.3 8707.3 9070.9 12061.9 10613.6 15921.2 11098.9 12445.3 12894.9 11500.2 15346.9 True False 10675.15364164201 9441.094729272007 9686.505821752866 12806.936168437544 9868.137350932251 15791.543025857041 11521.274713051118 12197.068728351025 12352.97219622267 10774.075409363597 13459.328592014623 0.7931416168838871 0.7014536174466666 0.7196871489934379 0.9515286056717464 0.7331819922122257 1.1732786608112171 0.8560066450778722 0.9062167287889462 0.9178000307943778 0.8004912975938355 1.0 13.716318823589035 -6.546489793748083 1.3037039289657857 0.9566737380043667 0.7319226086142054 0.2829589552797174 0.11410875217372296 0.30841132743829003 1.008945766870746 0.014742938773872762 0.04886808040868282 2.8412549558594765e-07 6.546489793748083 -0.22475112939016129 LLATAS(ph)FTK ddPTM_A549_MK2206_60min_R1 1 LLATASFTK 9 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2;H7C4S1 Q8WYP5 AHCTF1 Protein ELYS 1 LLAT(0.001)AS(0.816)FT(0.184)K 91.855 0.0010215 1320800.0 1442.1 1707.0 1360.6 1688.9 2252.7 1608.8 1310.5 1180.2 2349.6 2396.3 2443.2 True False 1685.4912240400645 1793.8790088134974 1553.5535391888689 2102.6805758176024 1921.3308141336458 1779.0421481649905 1548.6008866132368 1347.4969642109158 1817.4193515402017 1854.9741656973704 1836.486011110341 0.9177805950294253 0.9767997131265469 0.8459381284639294 1.1449477769483907 1.0461995367838428 0.968720772933838 0.8432413191521951 0.7337365795649149 0.9896178574436232 1.010067136082268 1.0 10.842732191470235 -8.961697755202179 24.999269872720284 0.9954200590476208 0.9369155303240848 0.07315234288715344 0.10302595492261139 380.5014838896851 248348.6784085118 0.01878814438428898 0.019961915832448676 1.0922001825762685e-09 8.961697755202179 -0.05850452872353595 LLATAS(ph)FTK ddPTM_A549_PD325901_60min_R1 2 LLATASFTK 9 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2;H7C4S1 Q8WYP5 AHCTF1 Protein ELYS 1 LLAT(0.001)AS(0.998)FT(0.001)K;LLATAS(0.984)FT(0.016)K 117.02 0.00018415 6074400.0 5761.9 4858.200000000001 5546.0 5422.2 5621.7 6561.3 5528.799999999999 5917.5 5626.299999999999 5653.6 6702.299999999999 True False 6346.843846313409 5267.617563854384 5922.384910807241 5757.116979290333 5226.851185812149 6507.866948192078 5739.201509475443 5799.470820311058 5389.846176985286 5296.630731150592 5877.959589380239 1.079769901409378 0.8961643039144799 1.0075579494468225 0.9794414016883966 0.8892288397585357 1.1071642887695075 0.9763934954307119 0.9866469362581214 0.9169586988524331 0.9011002288481297 1.0 12.521099725243518 -10.0366370191934 0.0017698010159639488 1.321810909683677e-06 1.9398404472300423 0.025856755657898578 0.06829400264202484 618964.0240928006 353.46285755036104 194831.96032565666 192589.81543125675 9.191004543770633e-11 10.0366370191934 1.9398391254191327 LLAVAAT(ph)APPDAPNREEVFDER ddPTM_A549_MK2206_60min_R1 2 LLAVAATAPPDAPNREEVFDER 22 1 P18206;P18206-2 P18206 VCL Vinculin 1 LLAVAAT(1)APPDAPNREEVFDER;LLAVAAT(1)APPDAPNREEVFDER 127.38 5.0612e-22 9747100.0 2138.76 2001.39 2030.4499999999998 2223.69 3154.6000000000004 2479.7 2262.7 2228.48 3841.0 3829.8 3468.9 True False 2499.7304003383456 2103.2522023721426 2318.3983416478313 2768.494149825238 2690.5625188733507 2742.1002081083566 2673.8033011367957 2544.373864433776 2971.019632816614 2964.645520088384 2607.4763932304586 0.9586780562340493 0.8066236794444679 0.8891349304894445 1.0617523353280645 1.0318645744439339 1.0516299266322828 1.0254372036036588 0.9757993863489964 1.1394234059146184 1.1369788534942096 1.0 11.348438476036652 -6.242636023669191 6.24130364718158 1.0542600747803028 0.875757006797056 0.6280513465413582 0.057499899154650064 0.08539174780959016 13.698000906117617 0.008628426576381238 0.022353073629829658 5.71957785943385e-07 6.242636023669191 -0.17850306798324678 LLAVAAT(ph)APPDAPNREEVFDER ddPTM_A549_PD325901_60min_R1 2 LLAVAATAPPDAPNREEVFDER 22 1 P18206;P18206-2 P18206 VCL Vinculin 1 LLAVAAT(1)APPDAPNREEVFDER;LLAVAAT(1)APPDAPNREEVFDER 135.58 1.9135e-22 12368800.0 3470.8 4107.9 3900.1 3792.9 3859.4 4013.7 3735.8 3982.2 4332.2 4547.700000000001 4489.9 True False 3823.1530609320835 4454.087149676302 4164.784239206516 4027.178818699107 3588.329058207202 3981.0137579379957 3877.9679133081986 3902.7718970245346 4150.132699631315 4260.557445884662 3937.6707638211287 0.9709174002201452 1.1311476801463312 1.0576771114213204 1.022731218592567 0.9112821445551926 1.0110072671679657 0.9848380288516061 0.9911371801021962 1.0539562468661072 1.0819994106744981 1.0 11.9431267744543 -6.29779592720257 5.109221798884844 1.0111379408396415 1.0612605849236023 0.12351157786543399 0.05322696886060233 0.2724967113083094 18.704747233276677 0.007022682014436258 0.017144169216429268 5.037372567925304e-07 6.29779592720257 0.05012264408396083 LLDAQLATGGIVDPR ddPTM_A549_PD325901_60min_R1 1 LLDAQLATGGIVDPR 15 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 89.301 9.6599e-05 1396300.0 1655.2 1696.7 1419.4 1760.6 1951.7 2080.8 2089.7 1910.6 2060.3 1499.8 2001.3 False True 1823.2346855061614 1839.6868635691683 1515.7290195455828 1869.3482633872895 1814.619324999481 2063.854654687041 2169.224677027717 1872.4915841632958 1973.7127558862478 1405.1023720425314 1755.1527872859574 1.038789727431924 1.0481633718133043 0.8635880765055204 1.0650629830796188 1.033881117441336 1.175883187855365 1.2359178601095182 1.0668538931352995 1.1245247537328393 0.8005584369753251 1.0 10.777380908277614 -6.493747163840213 24.23536311107594 1.0806787691151545 0.9857031458542854 0.0733843360807096 0.11444518095521843 618.1829408270254 514282.4711727458 0.012242316296525805 0.028395532233591037 3.2081364834881137e-07 6.493747163840213 -0.09497562326086906 LLDGPS(ph)TEKDLDEK ddPTM_A549_MK2206_60min_R1 1 LLDGPSTEKDLDEK 14 1 A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7 A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 1 LLDGPS(0.866)T(0.134)EKDLDEK 99.569 9.6049e-06 6482600.0 3083.2 2639.8 2010.6 1651.4 1799.6 1138.9 1136.1 1619.1 1784.9 1712.1 1495.7 True False 3603.5687829972417 2774.15454450256 2295.733313165618 2055.9930741341627 1534.881223915705 1259.417642059365 1342.514664083403 1848.6123832857918 1380.6229998996025 1325.3354208949077 1124.2764107800158 3.205233827237475 2.4675022244555227 2.041965206379144 1.8287256180245994 1.3652169601697988 1.1202028522377243 1.1941144110210182 1.6442685851633552 1.2280102888058775 1.1788341445102442 1.0 10.134781059933244 -2.000000007361444 0.3661222569635347 1.0927692534659632 29.761058839458066 0.9337992898706402 0.16752876070349818 9.200439038859965 0.1115072926596704 0.043907404020831146 187.54598201478413 0.009999999830496492 2.000000007361444 28.668289585992103 up LLDHMAPPPVADQAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LLDHMAPPPVADQASPR 17 0 A0A0C4DFS6;Q9C004 A0A0C4DFS6 SPRY4 Protein sprouty homolog 4 1 LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR 66.889 0.00064549 21610000.0 2699.1 2311.1000000000004 2708.0 2486.9 3418.1000000000004 2370.58 2768.2 2239.7 3928.8 3964.8 3704.8 True False 3154.6420933406407 2428.7251184937754 3092.0351198908247 3096.190611641184 2915.302017929692 2621.4332021363516 3271.14610783881 2557.1843337935825 3038.933073004401 3069.14892632681 2784.795912721673 1.1328090790888532 0.8721375621813887 1.11032736932915 1.1118195762558323 1.0468637951570643 0.9413376363276612 1.174644825100239 0.9182663340288953 1.0912588097108888 1.1021091033300279 1.0 11.443355886377077 -11.214252499408893 1.6644384458519832 0.9999664556206578 1.0484463369338577 0.0 0.09639268118015873 1.184325978615233 5.903415290383407 0.061804480610662224 0.012784325854975007 6.105869256099157e-12 11.214252499408893 0.04847988131319991 LLDHMAPPPVADQAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LLDHMAPPPVADQASPR 17 0 A0A0C4DFS6;Q9C004 A0A0C4DFS6 SPRY4 Protein sprouty homolog 4 1 LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR 74.0 0.00016519 37237000.0 3658.2 3706.7 3782.8 3469.7 4025.3999999999996 3072.3 3147.7 3434.4 3678.6000000000004 4084.1 5120.7 True False 4029.5777709754966 4019.0766176647817 4039.5235558243103 3684.015488739564 3742.66979087611 3047.2802074178194 3267.4874459875296 3365.89819776532 3524.0012346760886 3826.229229003135 4490.88636279179 0.8972789434980231 0.894940618173713 0.8994936031543477 0.8203314871787071 0.8333922278428469 0.6785476098138135 0.7275818584632976 0.749495294660025 0.7847006025076461 0.8519986746279044 1.0 12.132784501344048 -10.665668746046055 0.9666840113358736 0.9982828541283827 0.8079039168600317 0.16107633016764733 0.08052254873985748 0.39400238552553074 0.6640653501867327 0.05043898902818099 0.0138939612638259 2.159390835839945e-11 10.665668746046055 -0.19037893726835098 LLDLPAAAS(ph)SEDIER ddPTM_A549_MK2206_60min_R1 1 LLDLPAAASSEDIER 15 0 P22466 P22466 GAL Galanin peptides;Galanin;Galanin message-associated peptide 1 LLDLPAAAS(0.91)S(0.09)EDIER 156.5 1.8315000000000001e-19 3176700.0 706.9 953.21 672.85 551.08 1175.1 897.29 912.39 934.97 1046.4 645.9 886.89 True False 826.2074379543178 1001.7243175109046 768.2702475696238 686.0946247389215 1002.2443466455567 992.2406322271027 1078.1594528325465 1067.5048607255376 809.3920707574333 499.990741402968 666.6507360812255 1.2393407720675669 1.502622382747738 1.1524329097508368 1.02916652994639 1.5034024450899908 1.4883965148824299 1.617277825522692 1.6012955554518002 1.2141171185308883 0.7500040341094719 1.0 9.380787309064104 -9.325326359037323 1.6683566018075848 1.0638215313589618 1.386329194498458 0.42688977315440935 0.2047111787353597 0.2717943173783024 1.5581050458134744 0.0431309950783937 0.03752067439145557 4.727958338054055e-10 9.325326359037323 0.3225076631394961 LLDLPAAAS(ph)SEDIER ddPTM_A549_PD325901_60min_R1 1 LLDLPAAASSEDIER 15 0 P22466 P22466 GAL Galanin peptides;Galanin;Galanin message-associated peptide 1 LLDLPAAAS(0.873)S(0.127)EDIER 100.45 7.5562e-06 4407500.0 867.18 809.56 928.35 924.96 825.97 886.05 1004.7 992.43 609.15 480.13 1107.2 True False 955.2154752158242 877.7844623510668 991.3534136220526 982.0926784634253 767.9567166418099 878.834302568941 1042.9344082929351 972.6352051037265 583.5495438761867 449.8145098605016 971.0214191190788 0.983722352986205 0.9039805354112606 1.0209387703532011 1.011401663368446 0.7908751563261175 0.9050617064309756 1.07405911729434 1.0016619468457366 0.6009646464911034 0.4632385043252477 1.0 9.923359309225637 LLDLPAAAS(ph)SEDIERS ddPTM_A549_MK2206_60min_R1 2 LLDLPAAASSEDIERS 16 1 P22466 P22466 GAL Galanin peptides;Galanin;Galanin message-associated peptide 1 LLDLPAAAS(0.988)S(0.012)EDIERS;LLDLPAAAS(0.979)S(0.021)EDIERS 205.95 4.4731e-40 11444000.0 3523.3 4603.5 4109.7 4046.7999999999997 5646.700000000001 3615.8 3444.6000000000004 3940.6 4730.1 6341.4 5860.8 True False 4117.946903585296 4837.79848686171 4692.517257095762 5038.266181667755 4816.077910138257 3998.421556026211 4070.439232375398 4499.192117581371 3658.7399024175625 4908.873335706427 4405.401610148775 0.934749488922584 1.0981515228297956 1.0651735465582877 1.1436564988901448 1.0932210809210678 0.9076179449371882 0.9239655297256623 1.0212898881265513 0.8305122270779765 1.1142850913745974 1.0 12.105057830381943 -7.261878059917788 24.997493953346165 0.9261061568653448 1.0728798911318387 0.17384840471179808 0.0877067927698284 28.525662977653024 1625497.9618082084 0.011710235283367726 0.019432282973633967 5.4716957418657326e-08 7.261878059917788 0.14677373426649387 LLDLPAAAS(ph)SEDIERS ddPTM_A549_PD325901_60min_R1 2 LLDLPAAASSEDIERS 16 1 P22466 P22466 GAL Galanin peptides;Galanin;Galanin message-associated peptide 1 LLDLPAAAS(0.801)S(0.199)EDIERS;LLDLPAAAS(0.953)S(0.047)EDIERS 130.29 3.7502999999999994e-10 17310100.0 3035.8 3499.3 3613.2 3491.8 3493.3 3206.5 3707.2 3991.8999999999996 3242.3 3226.9 3608.6 True False 3343.992181162157 3794.1982917944174 3858.4134799366616 3707.480555546823 3247.942659230765 3180.387327111686 3848.2795246576793 3912.2784229150325 3106.0374064019707 3023.1529832938 3164.7650768001326 1.0566320406136558 1.1988878162263783 1.219178481278576 1.171486813579043 1.0262823876060756 1.0049363064658654 1.215976361995451 1.2361986839385577 0.9814432765235324 0.9552535211714622 1.0 11.62788269581195 -8.784038255639901 24.992745927774838 0.9912370741273892 1.1408494965090734 0.46598647622332423 0.07706914030038242 160.9948921015377 178047.99735872558 0.01385451933007557 0.014754365700623025 1.6442268820424293e-09 8.784038255639901 0.14961242238168426 LLDLPAAASS(ph)EDIER ddPTM_A549_MK2206_60min_R1 1 LLDLPAAASSEDIER 15 0 P22466 P22466 GAL Galanin peptides;Galanin;Galanin message-associated peptide 1 LLDLPAAAS(0.441)S(0.559)EDIER 57.678999999999995 0.0099124 2802400.0 510.17 547.59 577.68 373.16 648.77 779.86 631.67 450.47 865.3 566.63 629.96 True False 596.2742235410299 575.4599920540035 659.6037105090593 464.58421675178903 553.3367924204223 862.3842675708287 746.4362625310824 514.3255020065167 669.3109316001602 438.62788945837406 473.52354598848655 1.2592282444926781 1.215272180082879 1.3929691904383086 0.9811216795607565 1.1685518008725935 1.8212067274724224 1.5763445532003844 1.08616668878177 1.4134691659375986 0.9263063963223469 1.0 8.88729235535484 -10.852929054148646 0.9770626427646095 0.9900581871894282 1.3293844471003036 0.27464748496497027 0.22290988150977784 0.747665124100762 1.203676690058949 0.18501406686397026 0.03999676903096126 1.403042885328004e-11 10.852929054148646 0.3393262599108754 LLDPEDIS(ph)VDHPDEK ddPTM_A549_PD325901_60min_R1 1 LLDPEDISVDHPDEK 15 0 A0A087WUZ3;Q01082;Q01082-2;F8W6C1;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 LLDPEDIS(1)VDHPDEK 48.288000000000004 0.0083957 3322500.0 505.61 548.25 731.69 751.34 669.04 687.75 750.95 719.25 832.22 675.06 865.63 True False 556.9391549895906 594.4529515835421 781.3468834094035 797.7485653830541 622.0489384627004 682.1491920227854 779.5278131856079 704.9039945092904 797.244687523008 632.4365963935394 759.1629976806798 0.733622630042687 0.7830373100370491 1.0292215055218679 1.0508264599568962 0.8193878526260148 0.8985543211495036 1.0268253531417424 0.928527861161363 1.0501627317962963 0.8330708929777894 1.0 9.568265865532675 -4.322811250950688 0.6044217444715813 1.006265215866116 1.4912839015362636e-46 0.26913239402662403 0.09485097125728333 5.331130221716599 0.5796852087462973 0.014030637661058101 4.866113147562688 4.755418566392603e-05 4.322811250950688 -1.006265215866116 LLDPEDVDVS(ph)SPDEK ddPTM_A549_MK2206_60min_R1 2 LLDPEDVDVSSPDEK 15 0 F8W9J4;Q03001;E9PHM6;Q03001-14;Q5T0V7;A0A494C1D7;Q03001-13;F6QMI7;E7ETB9 F8W9J4;Q5T0V7;A0A494C1D7;F6QMI7 DST Dystonin 1 LLDPEDVDVS(0.5)S(0.5)PDEK;LLDPEDVDVS(0.614)S(0.386)PDEK 100.55 7.5089e-06 4216800.0 2107.3 2344.7 1866.19 1650.1100000000001 3191.1 2557.3 1946.04 2505.3 3228.8 3135.1 2920.8 True False 2462.960721461499 2464.0352149765727 2130.8438036887214 2054.3870240762535 2721.6934172246083 2827.9117886016447 2299.6102780502288 2860.433947159469 2497.481955334099 2426.8787325784883 2195.4847500209066 1.1218300293081267 1.1223194399109848 0.9705573239205739 0.9357327688369006 1.2396776689971045 1.2880580421133492 1.047427124250501 1.302871243870963 1.1375537704419567 1.1053953950513107 1.0 11.100323798108267 -4.145799738811058 2.092243781215317 1.0937544662876815 3.146557560690775 0.0 0.11934743510219945 880.0832144192606 71.38925386953586 0.017757076385513694 8287.236957507897 7.14825869471892e-05 4.145799738811058 2.0528030944030937 LLDPEDVDVS(ph)SPDEK ddPTM_A549_PD325901_60min_R1 1 LLDPEDVDVSSPDEK 15 0 F8W9J4;Q03001;E9PHM6;Q03001-14;Q5T0V7;A0A494C1D7;Q03001-13;F6QMI7;E7ETB9 F8W9J4;Q5T0V7;A0A494C1D7;F6QMI7 DST Dystonin 1 LLDPEDVDVS(0.5)S(0.5)PDEK 61.353 0.0052553 4680600.0 1573.7 1743.2 1724.9 1905.3 2099.7 1909.4 1732.0 1822.2 1573.1 1801.7 2047.7 True False 1733.460865503291 1890.1055817609313 1841.9620866663197 2022.986053749745 1952.2243155717615 1893.8504794595535 1797.912207786766 1785.854791511754 1506.988077602609 1687.9403545199552 1795.8458814397918 0.9652614867560435 1.0524876334296394 1.0256793780040607 1.1264808827179797 1.0870778699598629 1.0545729447235128 1.0011506145200597 0.9944365549230607 0.8391522308108114 0.9399138155255701 1.0 10.810447828714944 -8.257834923547083 2.1813267098582703 0.9248197098614903 1.0537961818778456 0.47943535156635986 0.05329453134171635 0.22860170043018221 2.1303248698825095 0.011771637604136412 0.015111407702134521 5.522873252261846e-09 8.257834923547083 0.12897647201635531 LLDPEDVDVSS(ph)PDEK ddPTM_A549_PD325901_60min_R1 1 LLDPEDVDVSSPDEK 15 0 F8W9J4;Q03001;E9PHM6;Q03001-14;Q5T0V7;A0A494C1D7;Q03001-13;F6QMI7;E7ETB9 F8W9J4;Q5T0V7;A0A494C1D7;F6QMI7 DST Dystonin 1 LLDPEDVDVS(0.039)S(0.961)PDEK 177.88 9.6869e-28 4273900.0 1550.7 1985.4 1712.8 1824.9 1880.4 2169.3 1807.4 1740.5 1956.1 1583.9 1961.2 True False 1708.125922434996 2152.7166257619065 1829.0409079031083 1937.6199283513943 1748.3271910278336 2151.6339400291236 1876.18159604723 1705.7843621041648 1873.891919520987 1483.8922836899342 1719.9848330711143 0.9931052237158722 1.251590470084628 1.0634052537761447 1.1265331479067069 1.016478260396118 1.2509609960846453 1.0908128722840067 0.9917438394258431 1.089481653262642 0.8627356795003677 1.0 10.748180127874598 -10.673495797232453 0.2809101225656474 0.9528822046007233 1.1208939283726238 0.27465897256786587 0.09344903161888293 5.20468753491141 0.5448203406123959 0.2896041950714163 0.04690601293670113 2.1208219166720566e-11 10.673495797232453 0.16801172377190055 LLDRS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 LLDRSPSR 8 1 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 LLDRS(0.989)PS(0.011)R 84.68700000000001 0.00086931 39799000.0 1814.5 1758.3 1370.9 1756.9 2133.1 1697.3 1691.8 1515.4 2260.7 2595.5 2070.6 True False 2120.7432397342054 1847.7899596934808 1565.3142340688087 2187.340578870237 1819.3238157004837 1876.907159423443 1999.178160986093 1730.2125907178618 1748.6550595960737 2009.1747473469636 1556.412874347197 1.3625839741422754 1.1872106625104186 1.0057191506626062 1.4053729668534571 1.168921078517523 1.205918551792159 1.2844780417436499 1.1116668457548973 1.1235161880355868 1.2909008788491727 1.0 10.604009103830055 -9.344529952527123 0.5193371757530673 1.0049445564131474 1.2300010986423517 0.0 0.13235407157480375 0.5825522647450475 0.3624798527351328 0.05050924621451632 0.030495751143015476 4.523452637988322e-10 9.344529952527123 0.22505654222920435 LLDRS(ph)PSR ddPTM_A549_PD325901_60min_R1 4 LLDRSPSR 8 1 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 LLDRS(0.999)PS(0.001)R;LLDRS(0.716)PS(0.284)R;LLDRS(0.999)PS(0.001)R;LLDRS(0.614)PS(0.386)R 118.23 0.0003478 180890000.0 15597.400000000001 15067.099999999999 15887.8 14521.5 18176.5 16200.099999999999 16364.7 16188.2 16506.4 17747.3 18491.8 True False 17180.836565801004 16336.857394992052 16966.04164910265 15418.460074280654 16899.84534552085 16068.171756726038 16987.467613607445 15865.313651602766 15812.693410552232 16626.732449226824 16217.425829178273 1.0594058975062102 1.0073643972275117 1.0461611989356212 0.9507341199945477 1.0420793980210332 0.9907966853664472 1.0474823681970364 0.9782880352724049 0.9750433624368517 1.0252386922782855 1.0 13.985257220177253 -8.289549809553723 24.826362985956557 0.9871411149615845 1.0180464664267763 0.11429375608473635 0.03187220782429186 762.4901105501111 673407.5332092441 0.004558958861653981 0.005512599496992173 5.13393292671721e-09 8.289549809553723 0.0309053514651918 LLEAQSHFR ddPTM_A549_PD325901_60min_R1 1 LLEAQSHFR 9 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2;A0A1B0GUH3 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 93.111 0.0010597000000000002 1553500.0 112.84 164.41 147.87 195.49 294.58 164.44 159.2 160.81 130.25 210.53 204.75 False True 124.29543373158248 178.26540769694515 157.9053474145451 207.5649733099973 273.88971704583 163.10085515990826 165.25844311758266 157.60251839699544 124.77604545657609 197.23709987072547 179.56704801718877 0.6921951165543719 0.9927512295010885 0.8793670618198829 1.1559190597716373 1.5252782738824797 0.9083005872229726 0.9203160877365627 0.8776806220142862 0.6948716194556592 1.0984036439238298 1.0 7.488378818117283 -7.502479295724268 24.815771969125482 0.861042937032558 1.0599074020569943 0.057851477894523495 0.21429749370774362 1038.4733041971706 1263295.5395231752 0.033054495422139986 0.052448616755618044 3.144276314891978e-08 7.502479295724268 0.19886446502443633 LLEDS(ph)EES(ph)SEETVSR ddPTM_A549_MK2206_60min_R1 1 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 2 LLEDS(1)EES(0.946)S(0.053)EET(0.001)VSR 194.55 2.7418e-38 7672800.0 2917.4 3128.6 2935.9 2435.9 4112.7 3139.8 2501.1 3108.6 4509.4 4195.3 4156.4 True False 3409.7857964180607 3287.8323766689573 3352.254766797443 3032.6956093517074 3507.7272780607477 3472.051551969439 2955.5174952372117 3549.2535696882333 3488.0281000320824 3247.5788162376084 3124.2511691957343 1.0913929808325336 1.0523585328497558 1.072978638801439 0.9706951986617658 1.1227417669379414 1.1113227983085745 0.9459922826877075 1.1360333652693826 1.1164365190683418 1.039474306117847 1.0 11.609294725973932 -5.254983309465481 21.411458843851815 1.057687330665191 1.0913930851937623 0.025868982784943872 0.06080041069710709 394.1337707261997 1306826.964539118 0.008630039641222815 0.10326300973625736 5.559256218464547e-06 5.254983309465481 0.033705754528571275 LLEDS(ph)EESS(ph)EETVSR ddPTM_A549_MK2206_60min_R1 1 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 2 LLEDS(0.998)EES(0.118)S(0.883)EET(0.001)VSR 138.19 7.241300000000001e-10 5264000.0 2082.5 2760.7 2421.8 1972.4 2723.5 2704.5 2407.2 2616.7 3636.1 2967.5 3720.7 True False 2433.975087763285 2901.20783809691 2765.2476563336777 2455.638088544402 2322.8767577986355 2990.688394898195 2844.5570806984992 2987.625238307662 2812.529155658547 2297.139688981743 2796.747503903997 0.8702877483096648 1.0373506489402766 0.988736971240218 0.8780335318496081 0.8305636295575907 1.0693451556579472 1.0170947061641298 1.0682498989047877 1.005642858975478 0.8213611295889784 1.0 11.449534294890638 -7.280602755968968 24.986564788920216 1.013562192987192 0.9288354729752021 0.15629920481464776 0.08220408739760587 739.7659961451276 964557.0732546587 0.008918326248262453 0.014270365015145458 5.240795868214254e-08 7.280602755968968 -0.08472672001199 LLEDS(ph)EESS(ph)EETVSR ddPTM_A549_PD325901_60min_R1 2 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 2 LLEDS(1)EES(0.186)S(0.814)EETVSR;LLEDS(0.997)EES(0.13)S(0.872)EET(0.001)VSR 194.55 2.7418e-38 65380000.0 4960.9 5167.9 5442.0 4795.0 6027.0 5320.700000000001 5249.7 5255.799999999999 5481.0 6116.0 5939.2 True False 5464.526915978439 5603.417069746627 5811.326845404438 5091.17625976488 5603.6843120212425 5277.3699832724615 5449.480206246064 5150.968945904665 5250.652630690928 5729.834716236911 5208.716051690781 1.0491120770932831 1.0757770272249192 1.1156927710655387 0.9774340181420053 1.0758283339715269 1.0131805863288315 1.0462233210960175 0.9889133703559497 1.0080512315480386 1.1000474319150055 1.0 12.346712076716484 -6.995809788606609 0.5448042596990534 1.001745120228972 1.0787714150936563 0.02107475825705818 0.044122019296140506 0.7772120743902259 0.3933278146391018 0.006638313449606046 0.027383866900487067 1.0096950133693408e-07 6.995809788606609 0.07702629486468426 LLEDS(ph)EESSEETVSR ddPTM_A549_MK2206_60min_R1 2 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 LLEDS(1)EESSEETVSR;LLEDS(0.999)EES(0.001)S(0.001)EETVSR 216.68 9.4116e-46 9776000.0 1763.6200000000001 2456.08 1974.74 1873.7399999999998 2765.82 2042.83 2179.07 2305.53 2669.82 2872.88 3166.6000000000004 True False 2061.275939630773 2581.083981234128 2254.78782594284 2332.8063841153844 2358.9715418595983 2259.000914679194 2574.9788126610515 2632.345937889504 2065.110032826463 2223.8944126981855 2380.2458262860196 0.8659928805954692 1.0843770642217585 0.9472919986004402 0.9800695198593599 0.9910621482069286 0.9490620211291334 1.081812132269918 1.1059134770112569 0.8676036777464813 0.9343129134557524 1.0 11.21689486409837 -8.78219095775373 24.99984128026562 0.9374795333474708 1.0016806650889005 0.14364854610393962 0.0723900744440547 375.1371650972133 451933.32319993834 0.0135156654387291 0.014396739860569031 1.6512355961119341e-09 8.78219095775373 0.06420113174142972 LLEDS(ph)EESSEETVSR ddPTM_A549_PD325901_60min_R1 1 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 LLEDS(1)EESSEETVSR 258.36 4.2645999999999995e-77 8165500.0 1882.2 1939.3 1575.9 2064.4 1904.3 1785.6 1869.5 2348.8 1656.5 2091.9 1816.2 True False 2073.2795583975935 2102.7316169739415 1682.8500506565335 2191.91329940743 1770.5485374783577 1771.0586656137932 1940.6448455296525 2301.9513414020444 1586.8830656339212 1959.8170769941134 1592.8189138403814 1.3016417248579708 1.320132250253188 1.0565231465007416 1.3761220942075556 1.1115818139109483 1.1119020814134264 1.2183712967412235 1.4452059310696546 0.9962733690849084 1.2304079641224737 1.0 10.637366542137581 -8.810515779498038 24.97633086499139 0.9982399645127784 1.2339691492724256 0.1806048598759985 0.13223617644650154 64.6351031176737 32894.27268629486 0.018583226395247714 0.01978336867212166 1.5469782955790261e-09 8.810515779498038 0.23572918475964721 LLEDSEES(ph)SEETVSR ddPTM_A549_MK2206_60min_R1 2 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 LLEDS(0.001)EES(0.979)S(0.021)EETVSR;LLEDS(0.001)EES(0.962)S(0.037)EETVSR 159.22 1.3773e-19 5135700.0 1673.53 1739.39 1365.46 1650.77 1983.86 1874.27 1520.1899999999998 1727.27 2623.0 2789.37 2556.51 True False 1955.9809501198044 1827.9175214646232 1559.1027602681402 2055.2087241058803 1692.0368220034513 2072.6040073602653 1796.3888453419129 1972.1158120425239 2028.8946880702879 2159.249379698401 1921.6580109134318 1.0178611069250858 0.9512189531558477 0.8113320639852268 1.0694976486107262 0.8805088170705081 1.0785498749463145 0.9348119359115444 1.0262574302204313 1.055804246410048 1.123638736672002 1.0 10.908135893479527 -7.342838220047615 1.051893589446194 1.024708701046727 0.9427262743799202 0.196367470248335 0.07957775071921779 0.6133114725255552 1.3435040082581164 0.011693460872681376 0.024854344135277602 4.5411074689771996e-08 7.342838220047615 -0.08198242666680688 LLEDSEES(ph)SEETVSR ddPTM_A549_PD325901_60min_R1 2 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 LLEDS(0.015)EES(0.959)S(0.026)EETVSR;LLEDSEES(0.992)S(0.008)EETVSR 198.74 1.6263999999999997e-38 7139900.0 1496.02 1838.51 1597.28 1547.0100000000002 2224.73 1787.7600000000002 1866.79 2022.13 1632.04 2306.31 1797.73 True False 1647.8948490882844 1993.4476899514052 1705.681026024917 1642.5652941853755 2068.472639701846 1773.2010752899396 1937.8317149966838 1981.7970308197032 1563.4510343719805 2160.6891930026736 1576.620606749406 1.0452069711849243 1.2643800806722876 1.0818588940947569 1.0418266050523917 1.311966005548104 1.1246847007447358 1.2291046474344922 1.2569904403987644 0.9916469616589765 1.3704560144355018 1.0 10.622619820749877 -8.779206980813592 24.84784431673823 0.9960554791492755 1.1707291947109195 0.0 0.1421163179616572 135.66849712659666 189730.48428800012 0.014119858383798244 0.015047420746294567 1.6626200718611877e-09 8.779206980813592 0.17467371556164402 LLEEALLR ddPTM_A549_MK2206_60min_R1 2 LLEEALLR 8 0 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 ; 77.67399999999999 0.012251 2205600.0 439.86 428.84000000000003 332.78 461.26 517.66 337.164 522.52 504.26 587.84 781.14 768.74 False True 514.0976144554905 450.66612427626274 379.9732079753576 574.2687207067481 441.5128997400552 372.84247068865005 617.4551203915668 575.7403992314831 454.6951785875859 604.6799314747087 577.8406418553384 0.8896875318510292 0.7799142040775429 0.6575743906751429 0.9938185013481892 0.7640738081738934 0.6452340726528382 1.0685560614238445 0.9963653601499683 0.7868868086669095 1.0464475630049046 1.0 9.174527867787889 -7.759700925673087 24.999125328502974 0.9171611790483711 0.79028585834028 0.33327187128326385 0.12079120680440171 60.41357566664786 868743.0034815167 0.019505195101545355 0.028106423799591888 1.738997967168048e-08 7.759700925673087 -0.12687532070809115 LLEEALLR ddPTM_A549_PD325901_60min_R1 2 LLEEALLR 8 0 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 ; 86.95299999999999 0.0075415000000000005 2836800.0 991.49 1203.71 993.16 1117.75 1401.88 1016.87 1179.2 1071.4 1231.53 1225.8400000000001 1543.5 False True 1092.1453349036392 1305.150866120612 1060.5618099562428 1186.790878905567 1303.4167850234517 1008.5889478621745 1224.075101282999 1050.0300865029592 1179.7730768609379 1148.4402531968374 1353.6592850526545 0.8068096211234994 0.9641649715939002 0.7834776606396854 0.8767279122673793 0.962883939419624 0.7450833152767408 0.9042711964520562 0.7756974728408967 0.8715435929027349 0.8483968350663406 1.0 10.4026489440914 -10.320422691527206 0.8095738901454252 0.996652893715069 0.8561249695946549 0.0 0.0816963886928505 0.4667127183728354 0.5780038869183058 0.036679964639332686 0.01258878388625001 4.7816447631510606e-11 10.320422691527206 -0.14052792412041415 LLEEHAK ddPTM_A549_MK2206_60min_R1 1 LLEEHAK 7 0 A0A2R8Y5M6;P51572;P51572-2 A0A2R8Y5M6 BCAP31 B-cell receptor-associated protein 31 0 57.559 0.037491000000000003 2120100.0 526.21 232.64 416.26 304.52 639.35 249.32 373.98 290.38 469.57 365.56 632.06 False True 615.0213834006809 244.4803823142192 475.29192725470995 379.12741367042236 545.3024619418236 275.7028769147782 441.92732512447026 331.5422542514537 363.2131447492051 282.97974210755353 475.1020580314346 1.2945037239977366 0.5145849784932808 1.0003996388145782 0.7979915204773493 1.147758576759826 0.5803024260874421 0.9301734598994952 0.6978337572882448 0.764494993463433 0.5956188514107226 1.0 8.89209364595584 -5.222375304999651 23.671029874708626 0.8581641069261219 1.294506104326453 0.3046892083344842 0.19810073205101847 10742.908356263633 6509455.3081648685 0.02332373768805351 9.317692648320508 5.992729776782892e-06 5.222375304999651 0.4363419974003311 LLEENETEAVTVPT(ph)PSPTPVR ddPTM_A549_PD325901_60min_R1 1 LLEENETEAVTVPTPSPTPVR 21 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 LLEENETEAVT(0.035)VPT(0.814)PS(0.133)PT(0.018)PVR 124.08 3.4460999999999997e-15 42474000.0 764.94 739.04 705.8 983.92 1027.1 1027.9 807.31 1176.0 1076.6 961.44 951.42 True False 842.596145680935 801.3214944611053 753.6998323201859 1044.6945037555504 954.9600393026421 1019.5291231991595 838.0326238269829 1152.5437574458465 1031.35424597735 900.7345143196236 834.4013715482963 1.0098211417335432 0.9603549583987275 0.9032821110080842 1.252028747048964 1.1444852224183668 1.2218689445672222 1.0043519251076356 1.3812821943319824 1.2360409284366256 1.0794978831928823 1.0 9.704597719066127 -6.250944318804944 24.953754979992315 1.1430852880493723 0.9580729523368939 0.4031677980692636 0.10991933372835191 677.1353887064874 1609998.4271264325 0.017508255147521308 0.04577937487965545 5.611199129918754e-07 6.250944318804944 -0.18501233571247833 LLEENETEAVTVPTPS(ph)PTPVR ddPTM_A549_MK2206_60min_R1 4 LLEENETEAVTVPTPSPTPVR 21 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 LLEENETEAVTVPT(0.059)PS(0.919)PT(0.021)PVR;LLEENETEAVTVPT(0.049)PS(0.945)PT(0.007)PVR;LLEENETEAVTVPT(0.191)PS(0.746)PT(0.063)PVR;LLEENETEAVTVPT(0.176)PS(0.696)PT(0.128)PVR 340.18 2.4937999999999993e-207 374704200.0 29394.11 32013.940000000002 32367.61 26139.51 41094.0 34786.630000000005 31993.66 29864.28 46807.52 45141.299999999996 46102.299999999996 True False 34355.11715100776 33643.31280340643 36957.82380610392 32543.691123447195 35049.12703689263 38467.72809710385 37806.493889357065 34097.63314552172 36205.69145624997 34943.848978005575 34653.82655124928 0.9913801900116352 0.9708397643663274 1.0664860849189997 0.939108155208158 1.0114071236854245 1.1100571545890963 1.0909760234831594 0.9839500147291091 1.0447819204815854 1.008369131366413 1.0 15.080727046246842 -5.732563761572731 24.988813499146715 1.0257921208713694 0.9811099362505533 0.13012052199347623 0.04672716049169348 351.3177246716259 304023.58252374927 0.0064033666440996605 0.024790655489496938 1.8511270983504133e-06 5.732563761572731 -0.04468218462081608 LLEENETEAVTVPTPS(ph)PTPVR ddPTM_A549_PD325901_60min_R1 4 LLEENETEAVTVPTPSPTPVR 21 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 LLEENETEAVTVPT(0.002)PS(0.954)PT(0.044)PVR;LLEENETEAVTVPT(0.266)PS(0.713)PT(0.022)PVR;LLEENETEAVT(0.001)VPT(0.027)PS(0.872)PT(0.1)PVR;LLEENETEAVTVPT(0.041)PS(0.859)PT(0.1)PVR 313.4 4.721499999999999e-164 598101500.0 8844.97 10995.609999999999 10396.72 10981.17 11275.0 11088.23 10013.100000000002 11182.18 10468.970000000001 10673.79 11278.75 True False 9742.904843077238 11922.248643796644 11102.3039397562 11659.451930853453 10483.082896638383 10997.931131170933 10394.153999878563 10959.142647649498 10028.99559772385 9999.8450777996 9891.535251887022 0.9849739797690727 1.2052980998598999 1.1224045263992966 1.1787302611724668 1.059803420772171 1.1118527964678528 1.0508130169071233 1.107931414949849 1.013896765500644 1.0109497487654322 1.0 13.271978741782892 -8.456724640761035 0.7465949095226649 1.0008090255726543 1.12099297509126 0.33413248193387846 0.05757774789964958 0.3836976885790415 0.43497371113907346 0.012704667790253452 0.015443874002024542 3.4936175392625027e-09 8.456724640761035 0.12018394951860567 LLEESIANLNRS(ph)TSVPENPK ddPTM_A549_PD325901_60min_R1 2 LLEESIANLNRSTSVPENPK 20 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 LLEESIANLNRS(0.686)T(0.134)S(0.18)VPENPK;LLEESIANLNRS(0.358)T(0.321)S(0.321)VPENPK 107.08 2.6831000000000003e-10 4556900.0 3176.1 3832.7 3852.1 3714.1 4382.0 4391.200000000001 3739.7 4111.8 4384.7 4042.2 4645.299999999999 True False 3498.535333878757 4155.695079861818 4113.526670559067 3943.511521666893 4074.223437079325 4355.439523097718 3882.01632994236 4029.7869233553015 4200.426307204982 3786.9748021538335 4073.9575489828917 0.8587559619398107 1.0200634223347107 1.0097126985493636 0.9679805138498396 1.000065265308545 1.0690930061814468 0.9528858077845087 0.9891578090599845 1.0310432194497618 0.9295567655336255 1.0 11.992215232027512 -5.2588580352919125 24.877365163711154 1.008977323142746 0.858755904863174 0.5000952651530012 0.03803311246569026 95.4674906889183 919997.4368863831 0.003954770280268123 0.03725859039344404 5.5098777706252425e-06 5.2588580352919125 -0.15022141827957192 LLEGEEER ddPTM_A549_MK2206_60min_R1 2 LLEGEEER 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8;P20700;E9PBF6;Q03252 P02545;P02545-2;P20700;Q03252 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 0 ; 125.96 0.0030083 11643500.0 3666.9 3697.5 3637.7000000000003 2796.8 3874.0 3439.8 3148.5 3246.9 4581.0 5010.2 4273.3 False True 4285.783072902371 3885.6869567005897 4153.580559684955 3482.016125553122 3304.1397318567665 3803.797352845557 3720.5416951558773 3707.1580182142197 3543.410814353788 3878.392340264978 3212.121672919867 1.3342530294023793 1.209694822415753 1.2930956491163326 1.0840237326339874 1.0286471274462197 1.1842008927973915 1.1582816823292528 1.1541150665206146 1.1031371707450839 1.2074238572474314 1.0 11.649310826830344 -2.0000000000000004 0.12374425689940345 0.9637882119627259 1.9936244536336005 0.2255255930420924 0.08609498593565072 41.13941774130715 0.3349607085557792 0.22119452005296011 7.384170284788663 0.00999999999999999 2.0000000000000004 1.0298362416708746 LLEGEEER ddPTM_A549_PD325901_60min_R1 2 LLEGEEER 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8;P20700;E9PBF6;Q03252 P02545;P02545-2;P20700;Q03252 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 0 ; 116.73 0.0035421 17653700.0 5815.9 6022.1 6458.9 6241.3 6627.5 6198.5 6421.700000000001 6230.8 7180.299999999999 6876.200000000001 6980.400000000001 False True 6406.325886560705 6529.603501561788 6897.239794520898 6626.810925979258 6162.007263633782 6148.021471106123 6666.081307589075 6106.521806031956 6878.536961165853 6442.035558500365 6121.855052401393 1.046468077359611 1.0666053746242243 1.126658461443864 1.0824841276468624 1.0065588307610516 1.0042742630266075 1.088898912262583 0.9974953267860496 1.1236033689604659 1.0523012229721735 1.0 12.579753171138018 -11.17770524074267 1.592254910107633 1.0000514494623267 1.0685738393605546 0.010854684391332525 0.045678451652687094 0.4793769630191997 2.1856870361199667 0.03399831180032354 0.007189518756030896 6.641937112237684e-12 11.17770524074267 0.0685223898982279 LLEKHDES(ph)VTDVTEVPQDFEK ddPTM_A549_MK2206_60min_R1 1 LLEKHDESVTDVTEVPQDFEK 21 1 A0A1B0GTU3;Q96L93-5;Q96L93-6;Q96L93-4;Q96L93;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 LLEKHDES(0.869)VT(0.113)DVT(0.018)EVPQDFEK 56.95 0.0022188000000000004 1413900.0 642.24 905.71 638.51 634.4 993.55 1084.0 637.82 610.37 1423.9 1183.7 776.27 True False 750.6344107395397 951.8067703998083 729.0603192029139 789.828028479298 847.4001111477269 1198.708160499035 753.703637924193 696.891816679729 1101.388923501061 916.3013478846469 583.5007350379105 1.2864326738007799 1.6312006365132832 1.2494591273403386 1.353602456778366 1.4522691408309376 2.0543387326172846 1.2916926966256936 1.1943289439634577 1.8875536179564587 1.5703516600113863 1.0 9.188590663076466 -11.1036652215209 1.4512599130999826 1.0007437431456796 1.5364910318803526 0.0 0.3103985624036844 0.388824203251783 1.467467663907186 0.19955707708087056 0.043702361522777615 7.876527225123679e-12 11.1036652215209 0.535747288734673 LLELKS(ph)PTELMK ddPTM_A549_MK2206_60min_R1 1 LLELKSPTELMK 12 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 LLELKS(0.798)PT(0.202)ELMK 44.294 0.014135 5384900.0 1919.4 2260.7 2064.1 1930.0 3084.9 1637.9 2073.8 2644.5 3621.0 2871.5 2960.4 True False 2243.347795175439 2375.7599737695823 2356.8204176390877 2402.850086640993 2631.1152965423207 1811.2214908499734 2450.5826162980024 3019.365973441591 2800.8492815488044 2222.8261556566385 2225.250977116508 1.00813248404114 1.0676368635272346 1.0591256635209159 1.079810821948102 1.1823903566831522 0.8139403193058987 1.1012612246882285 1.3568653623754843 1.2586666898931822 0.9989103155173035 1.0 11.119752345694662 -7.994738730708607 24.92471546103058 1.147255318246435 1.0390531310947408 0.161530708962613 0.1261664785063055 240.26096335102454 1138202.700493246 0.021964098667542845 0.030294828245938214 1.0121881982649508e-08 7.994738730708607 -0.10820218715169405 LLELQEVDS(ph)LLR ddPTM_A549_PD325901_60min_R1 1 LLELQEVDSLLR 12 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 LLELQEVDS(1)LLR 116.19 2.4656e-05 10026000.0 1466.2 1340.7 1482.4 1873.5 1700.1 1778.8 1874.2 1559.7 1809.6 1961.7 1835.2 True False 1615.0475446406083 1453.6854941870586 1583.004578395359 1989.2218399727853 1580.6908410266 1764.3140425592596 1945.523706601593 1528.590559939021 1733.5488050535125 1837.837927214184 1609.4820342913056 1.00345795121084 0.9032008206460981 0.9835490826664585 1.235939139170751 0.9821115162199477 1.096199898457475 1.2087887066463932 0.9497406789086011 1.0770849056521694 1.141881604179216 1.0 10.652380757604737 -6.013881999605589 24.98540976183504 1.056244777763389 0.9508407487885785 0.2264259933882813 0.0904355992401266 717.9807496411296 1292259.1499319929 0.01162679419130402 0.0322724296113827 9.68540978859583e-07 6.013881999605589 -0.10540402897481049 LLELTSS(ph)YSPDVSDYKEGR ddPTM_A549_PD325901_60min_R1 1 LLELTSSYSPDVSDYKEGR 19 1 P38432 P38432 COIL Coilin 1 LLELT(0.069)S(0.405)S(0.436)Y(0.028)S(0.061)PDVS(0.002)DYKEGR 51.175 0.0041526 7809700.0 1107.0 1369.1 1214.9 1295.6 1618.7 1563.7 1239.9 1448.7 1263.5 1453.3 1603.4 True False 1219.3818250696718 1484.4788618568687 1297.3504197871832 1375.6262694789116 1505.0080962118443 1550.9657456430834 1287.0850729993144 1419.8045420168353 1210.399488939608 1361.5383899782712 1406.1919647900393 0.8671517513981383 1.055672979953714 0.9225983736728951 0.9782634973912032 1.070272149106299 1.102954493040828 0.9152982702411411 1.0096804544241784 0.8607640487551319 0.9682450362895969 1.0 10.457577840485207 LLEQEALMEQQDPKS(ph)PSHK ddPTM_A549_PD325901_60min_R1 2 LLEQEALMEQQDPKSPSHK 19 1 Q96PY5-3;Q96PY5;C9IZY8 Q96PY5-3 FMNL2 Formin-like protein 2 1 LLEQEALMEQQDPKS(0.941)PS(0.059)HK;LLEQEALMEQQDPKS(0.799)PS(0.201)HK 115.88 1.9058e-14 39366000.0 5855.7 7008.6 6390.2 6827.0 7442.799999999999 8238.2 7179.8 7343.8 8235.2 6649.299999999999 7386.3 True False 6450.166353261494 7599.239318683843 6823.877399394235 7248.688284758046 6920.043404266089 8171.110830566503 7453.03121793731 7197.322147900352 7889.103182679424 6229.462063223365 6477.831925613485 0.9957291926265329 1.1731146170428242 1.0534199525017744 1.1189991293377928 1.0682653523170447 1.2613959306751628 1.1505440868985606 1.1110696033100191 1.2178616662599322 0.9616584892534707 1.0 12.661295320990678 -5.242867559518521 23.33443651919418 1.1171192182070082 0.9957289262305399 0.1301818479600827 0.0850598180985407 2537.4571926594285 3188044.976796206 0.012100684592684235 0.5053183971029737 5.716529387887294e-06 5.242867559518521 -0.12139029197646833 LLES(ph)PGVEAGEGEAEKEEAGAQGR ddPTM_A549_MK2206_60min_R1 2 LLESPGVEAGEGEAEKEEAGAQGR 24 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 LLES(1)PGVEAGEGEAEKEEAGAQGR;LLES(1)PGVEAGEGEAEKEEAGAQGR 132.76 3.2618000000000004e-23 28084000.0 3112.9 4394.1 4040.0 3296.4 4403.4 3457.1 3912.5 4277.6 4633.4 4667.7 4389.8 True False 3638.281416901961 4617.740921281422 4612.932749024717 4104.01814798102 3755.665693148709 3822.928027362746 4623.350605779697 4883.962899600587 3583.9422980193917 3613.2633281415606 3299.6915076834366 1.1026125952775 1.3994462544540498 1.3979890963392658 1.2437581326692762 1.1381869136564804 1.1585713447638777 1.40114631777367 1.4801271234683981 1.086144656151664 1.095030647479609 1.0 11.688115436060682 -8.929167506899997 8.418794068911865 1.0377712867991606 1.2902835147664733 0.42892936944055693 0.11849949132691204 0.17122568872490285 18.246098147235802 0.02123341178000024 0.02252555648229535 1.1771518597841067e-09 8.929167506899997 0.25251222796731265 LLES(ph)PGVEAGEGEAEKEEAGAQGR ddPTM_A549_PD325901_60min_R1 2 LLESPGVEAGEGEAEKEEAGAQGR 24 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 LLES(1)PGVEAGEGEAEKEEAGAQGR;LLES(1)PGVEAGEGEAEKEEAGAQGR 214.74 1.1059e-74 30255000.0 9081.900000000001 11352.0 10782.2 10709.400000000001 11554.9 11694.2 11332.599999999999 11378.4 10782.3 12343.599999999999 13800.400000000001 True False 10003.887802258589 12308.672879847472 11513.944930635744 11370.895315187912 10743.323686240958 11598.96631239965 11763.868294436666 11151.448885817883 10329.157427458274 11564.222989428043 12103.03828794341 0.8265600392443676 1.0169903281318138 0.9513268203163087 0.9395075058562088 0.8876551020203788 0.9583516168790529 0.9719764586843775 0.9213759901037855 0.8534350781776665 0.9554809886826423 1.0 13.563081639670695 -6.553330248186268 24.910063490184804 0.9307180750606957 0.9410381498526892 0.0 0.05622458020293786 1608.3894175176404 1315699.376984848 0.009379128647899347 0.01952431423583509 2.7968537145660807e-07 6.553330248186268 0.010320074791993483 LLES(ph)PGVEAGEGEAEKEEAGAQGRPLR ddPTM_A549_MK2206_60min_R1 3 LLESPGVEAGEGEAEKEEAGAQGRPLR 27 2 A0A0G2JHC2;Q6NYC8;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 LLES(1)PGVEAGEGEAEKEEAGAQGRPLR;LLES(1)PGVEAGEGEAEKEEAGAQGRPLR;LLES(1)PGVEAGEGEAEKEEAGAQGRPLR 122.57 2.0707e-18 24827500.0 3132.86 3200.8 2834.19 2610.71 4365.6 2959.2799999999997 2519.26 2874.77 4743.0 4760.299999999999 4850.5 True False 3661.610176926812 3363.707048277824 3236.120759395633 3250.334067199225 3723.42602307535 3272.429045388917 2976.9769321703675 3282.2774511138905 3668.7180730146274 3684.944923828068 3645.9869830102743 1.0042850383145467 0.9225779093431132 0.8875842877320864 0.8914826307239357 1.0212395273010928 0.8975427122032859 0.8165078334186632 0.9002438753645547 1.0062345505099926 1.0106851563100285 1.0 11.832093695304069 -8.766169202496098 24.990294134836624 1.0029441000761947 0.9153775423419694 0.3523452668134611 0.053008001063881614 93.5462735232033 494255.9926661994 0.009250819440624362 0.01000421383245854 1.7132896744150823e-09 8.766169202496098 -0.08756655773422528 LLES(ph)PGVEAGEGEAEKEEAGAQGRPLR ddPTM_A549_PD325901_60min_R1 2 LLESPGVEAGEGEAEKEEAGAQGRPLR 27 2 A0A0G2JHC2;Q6NYC8;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 LLES(1)PGVEAGEGEAEKEEAGAQGRPLR;LLES(1)PGVEAGEGEAEKEEAGAQGRPLR 226.65 3.069999999999999e-96 39460000.0 5023.7 5033.0 4732.3 5383.299999999999 7101.0 5837.7 6143.5 6011.8 5903.9 6552.799999999999 7257.2 True False 5533.702325747525 5457.148573315038 5053.462335631648 5715.814214638643 6602.250257120101 5790.159706683269 6377.294254352197 5891.889932834132 5655.779614365293 6139.055089692155 6364.6104071811615 0.8694487127607801 0.8574206784374048 0.793993978002149 0.8980619156499375 1.03733768993477 0.9097429907336132 1.0019928709472499 0.9257267225950451 0.8886293508215212 0.9645610173979363 1.0 12.63585649072431 -6.52232521446812 24.999955108611346 0.9517146565317003 0.842672214642032 0.5815932553892114 0.044799070678518634 12.8970203226328 582480.9180364055 0.007348369010897681 0.01543805693785024 3.003826093149172e-07 6.52232521446812 -0.10904244188966827 LLESSLSS(ph)SEGEEPVEYK ddPTM_A549_MK2206_60min_R1 2 LLESSLSSSEGEEPVEYK 18 0 P08648 P08648 ITGA5 Integrin alpha-5;Integrin alpha-5 heavy chain;Integrin alpha-5 light chain 1 LLESSLS(0.01)S(0.976)S(0.014)EGEEPVEYK;LLESSLS(0.014)S(0.973)S(0.014)EGEEPVEYK 169.09 3.2838e-30 13710000.0 2310.1 2863.5 1983.2399999999998 2212.57 3692.7000000000003 2491.8999999999996 2229.36 2392.1 3472.4 3903.7 3506.7 True False 2699.9884034775328 3009.239919002607 2264.49325375638 2754.6497493260404 3149.508721690112 2755.5912040106537 2634.405854696747 2731.1875004990097 2685.9069442833647 3021.851458762603 2635.889610003533 1.0243177078549635 1.1416411019574426 0.8591001858205074 1.0450550504360265 1.19485607809118 1.045412218156951 0.9994370950508872 1.0361539763022736 1.018975504167553 1.146425649729145 1.0 11.364074236785262 -7.6787515308160925 6.559664911126596 1.011053917187981 1.053660778703273 0.0 0.08830211250733436 0.5162658727602256 33.49488508099105 0.011793517535403593 0.017505057859154894 2.0953108852733165e-08 7.6787515308160925 0.042606861515291916 LLESSLSS(ph)SEGEEPVEYK ddPTM_A549_PD325901_60min_R1 2 LLESSLSSSEGEEPVEYK 18 0 P08648 P08648 ITGA5 Integrin alpha-5;Integrin alpha-5 heavy chain;Integrin alpha-5 light chain 1 LLESSLS(0.329)S(0.661)S(0.01)EGEEPVEYK;LLESSLS(0.018)S(0.965)S(0.018)EGEEPVEYK 203.04 6.8738e-49 15052500.0 3177.3 3293.3 3762.5 3317.8 3923.7 3558.9 4015.5 3651.2 3431.5 4042.0 3959.6 True False 3499.857156995366 3570.8379488373535 4017.8458757504964 3522.7329707294944 3648.112848030159 3529.917498349533 4168.312049865915 3578.3739516890105 3287.2859883626948 3786.787430187965 3472.5943019724573 1.0078508609564392 1.028291138647867 1.1570156276154495 1.014438389399118 1.05054392502977 1.0165073116501158 1.200345242603861 1.030461274919581 0.9466369240125442 1.090477925404947 1.0 11.761798157311006 -8.535901990006087 12.365355139393866 0.9755128127203507 1.0686595623111865 0.051513144248123255 0.06816667268531929 0.5267033972915058 495.93858346844263 0.009757917880463037 0.011113285518147635 2.911374072211174e-09 8.535901990006087 0.0931467495908358 LLET(ph)PISSK ddPTM_A549_MK2206_60min_R1 2 LLETPISSK 9 0 O94986-1;O94986-2;O94986-3;O94986 O94986-1 CEP152 Centrosomal protein of 152 kDa 1 LLET(0.977)PIS(0.009)S(0.014)K;LLET(0.994)PIS(0.004)S(0.003)K 73.067 0.0025069000000000003 3440600.0 2702.14 3620.0 2828.5 3105.4 4600.9 3210.5 3258.8 2846.3 4590.5 4769.8 5031.0 True False 3158.195171019775 3804.242537729854 3229.623831835747 3866.223139406703 3924.113704775375 3550.232979042578 3850.88177740955 3249.77174142817 3550.7590795221713 3692.298867230031 3781.6638514637043 0.8351337652069171 1.0059705693453982 0.8540219222778649 1.0223603395923913 1.037668565717848 0.938801839213829 1.0183035638979532 0.8593497119450044 0.9389409579986437 0.9763688715486745 1.0 11.884805413846248 -13.18755676123887 0.00646453066120523 1.9863029437046973 2.581992218850151e-07 0.06813807015305873 0.06804938017430279 37334.88837023178 26.154222080537988 4299.9568021311 3752.785340141042 6.49296764512937e-14 13.18755676123887 -1.9863026855054755 LLETDS(ph)KSLR ddPTM_A549_PD325901_60min_R1 1 LLETDSKSLR 10 1 O60447;O60447-2 O60447 EVI5 Ecotropic viral integration site 5 protein homolog 1 LLET(0.014)DS(0.599)KS(0.387)LR 67.456 0.0012755000000000002 4283600.0 1189.5 901.16 1294.0 1089.9 1153.6 1509.7 1161.1 1232.2 1427.7 1391.8 1473.0 True False 1310.2571643363826 977.1039158212953 1381.8186214541242 1157.2206476575075 1072.5751157039508 1497.4055037394396 1205.2862958782991 1207.6228043578 1367.6987339604887 1303.9215104739255 1291.8303381163319 1.0142641225216305 0.7563717053170067 1.0696595215970912 0.8957992497257 0.8302755277197734 1.1591348024252666 0.9330066498018417 0.9348153304083894 1.0587293807906566 1.0093597216297183 1.0 10.335200891512123 -7.241555918767022 24.993702190165845 1.020954615538156 0.9122744998854099 0.2173619121555449 0.09663518535102303 901.7559166021919 1133516.327368364 0.013167051449446467 0.022786614863798044 5.733820344297613e-08 7.241555918767022 -0.10868011565274605 LLEVDLK ddPTM_A549_MK2206_60min_R1 1 LLEVDLK 7 0 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13247-2 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 0 89.29799999999999 0.035107 914150.0 823.74 930.5 746.62 971.64 1366.3 769.83 913.41 909.98 1297.4 1214.6 1149.5 False True 962.7671734905774 977.8584755131571 852.5019428408004 1209.6918436185776 1165.3190799266658 851.292899628204 1079.3647736294517 1038.9724516968724 1003.540971522071 940.2210164236641 864.047425413939 1.1142526962907675 1.131718522330756 0.9866379064000944 1.4000294521322725 1.3486749056261544 0.9852386276371061 1.2491962152567733 1.2024484086612863 1.1614420019147733 1.088159039387488 1.0 9.754966690278925 -10.388392604444254 0.7104061211168531 0.9966729939909676 1.1788426291128191 0.12895524608701825 0.12472369921016217 0.8848058232562444 0.7973338972714215 0.08839461619685239 0.025067710792899572 4.088908531683957e-11 10.388392604444254 0.18216963512185147 LLEVDLK ddPTM_A549_PD325901_60min_R1 2 LLEVDLK 7 0 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13247-2 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 0 ; 100.45 0.031091000000000004 2702000.0 3116.2 2870.5 2731.5 3396.2 3879.1 3449.4 3505.1000000000004 3336.6 3442.2 3988.5 3866.4 False True 3432.5543299748056 3112.4071090206266 2916.8760158438467 3605.9755606701765 3606.6453981685117 3421.309230044923 3638.4884985643166 3270.0488954879384 3297.536304572943 3736.665429318332 3390.857311128981 1.0122968957463863 0.9178820644577212 0.860217858849589 1.0634406670062952 1.0636382092314243 1.00898059579682 1.0730290792899473 0.9643723092550834 0.9724786394727513 1.1019825036737434 1.0 11.727434361016638 -6.2650736203299955 24.996462748227067 1.0024110399136361 0.9289072539470288 0.299823290888539 0.05765119024854673 303.04941113383865 2084394.5812949084 0.007175249854966201 0.017292548206068122 5.43158249090568e-07 6.2650736203299955 -0.07350378596660734 LLEVEHPAAK ddPTM_A549_MK2206_60min_R1 1 LLEVEHPAAK 10 0 P17987;F5H726;F5GZI8;F5H676;F5H136;E7ERF2 P17987 TCP1 T-complex protein 1 subunit alpha 0 65.347 0.0060265 2023400.0 731.93 718.71 621.06 568.04 1041.3 648.01 491.7 721.29 981.19 1120.4 1146.8 False True 855.4618900295708 755.2892691413876 709.1356468092303 707.2098255002849 888.1261494017689 716.5819880857755 581.0355253321089 823.5350663579823 758.9520316384619 867.3008618484056 862.0179099301479 0.9923945664874778 0.8761874439506613 0.8226460710853373 0.820411986054434 1.030287351539757 0.8312843385630381 0.6740411291213104 0.9553572575130324 0.8804365000954125 1.0061285871875745 1.0 9.751574033913906 -10.404710468904687 0.7199487829257378 1.0018303387844543 0.8711132511138444 0.21983474244092205 0.09182123871189901 0.9043496973416686 0.8354434279013452 0.06544830231751005 0.018455855511908297 3.9381253095417555e-11 10.404710468904687 -0.13071708767060986 LLEVEHPAAK ddPTM_A549_PD325901_60min_R1 2 LLEVEHPAAK 10 0 P17987;F5H726;F5GZI8;F5H676;F5H136;E7ERF2 P17987 TCP1 T-complex protein 1 subunit alpha 0 ; 68.657 0.004285100000000001 7867200.0 2434.1 2555.3999999999996 2906.3 2747.9 3168.4 3184.1000000000004 2745.3 2888.0 2810.0 3451.5 3591.8 False True 2681.2080401102894 2770.75252617708 3103.5389950016397 2917.631542066301 2945.8625143866134 3158.1697452849894 2849.773893785802 2830.3965744078273 2691.905472038224 3233.5717009633245 3150.0313702961585 0.8511686789513492 0.8795952168300408 0.9852406627651623 0.9262230114844832 0.935185135667284 1.002583585378093 0.9046811154512004 0.8985296467513338 0.8545646552672704 1.0265204757815831 1.0 11.621150480749353 LLEVQPQVANS(ph)PSSAAQK ddPTM_A549_MK2206_60min_R1 2 LLEVQPQVANSPSSAAQK 18 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 LLEVQPQVANS(0.866)PS(0.117)S(0.016)AAQK;LLEVQPQVANS(0.984)PS(0.014)S(0.001)AAQK 206.74 1.4943e-49 7078300.0 1445.17 1905.49 1747.02 1784.48 2661.5 2201.01 2198.3 1802.56 2873.7 3171.6 2908.5 True False 1689.0793649857706 2002.4713019941612 1994.7737057428606 2221.6776801083524 2269.99687566773 2433.9194172878088 2597.702654743898 2058.0784001084785 2222.811538355923 2455.133357228135 2186.239179483638 0.7725958718682874 0.9159433792907872 0.9124224487706788 1.0162098003536304 1.038311314228608 1.1132905494186 1.188206065979223 0.941378427128257 1.016728434480313 1.122993943328747 1.0 11.094235528388694 -5.510619042210061 1.1065123688618614 1.026348731635705 0.7266318544875375 0.5860502819736298 0.07131490395893596 0.6573655331302759 0.8511164435205057 0.010186222929555906 0.20550658478707892 3.0858936714221722e-06 5.510619042210061 -0.2997168771481674 LLEVQPQVANS(ph)PSSAAQK ddPTM_A549_PD325901_60min_R1 2 LLEVQPQVANSPSSAAQK 18 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 LLEVQPQVANS(0.987)PS(0.012)S(0.001)AAQK;LLEVQPQVANS(0.998)PS(0.001)SAAQK 203.89 5.636999999999999e-49 11208200.0 3138.3 2954.3 2834.0 3119.3 3422.6 3278.2 3143.5 3610.8 4479.3 3056.3 3234.2 True False 3456.8979057056467 3203.269229116751 3026.332282226418 3311.9720765557013 3182.208383329006 3251.503426083745 3263.1276126892053 3538.7797613821967 4291.050598185348 2863.3246964085793 2836.413903282989 1.2187565085985803 1.1293377265599875 1.0669572161959893 1.1676617692228488 1.1219125599567044 1.146343071552538 1.1504412698415838 1.2476245999521647 1.5128435921212693 1.0094876114852076 1.0 11.469852357663758 -8.244946665460212 5.9144092385328175 1.2494405445641148 1.1394971199373825 0.0 0.13552236956593294 0.38042569722598907 51.776921720303655 0.029701575948312412 0.037690507119449955 5.68922794435416e-09 8.244946665460212 -0.10994342462673234 LLEYDTVTR ddPTM_A549_PD325901_60min_R1 1 LLEYDTVTR 9 0 H0Y512;Q9HDC9-2;Q9HDC9 H0Y512 APMAP Adipocyte plasma membrane-associated protein 0 81.548 0.0043883 1036500.0 1026.3 1344.8 1109.7 1144.6 1436.9 1352.0 1313.5 1220.8 1532.5 1393.4 1293.6 False True 1130.4892204778723 1458.1310155760114 1185.0109151681934 1215.2993424247927 1335.9771010358934 1340.9897602541705 1363.4859612747798 1196.4501863009277 1468.094354412305 1305.4204862008687 1134.4954008060345 0.9964687557787225 1.2852683356318948 1.0445268568971444 1.0712245651779186 1.1775958722148283 1.1820142763923294 1.2018435335269342 1.0546099926459602 1.2940505121212968 1.1506617702225992 1.0 10.147835045062575 -4.987156383590921 10.560463908103923 1.1417967729048195 0.797877022152251 0.17911878084828514 0.09170033451488076 11430.066981803926 190809.0509503302 0.015408219170438681 54076.70691477104 1.0300151590769488e-05 4.987156383590921 -0.34391975075256853 LLFGS(ph)GSK ddPTM_A549_MK2206_60min_R1 1 LLFGSGSK 8 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 LLFGS(0.992)GS(0.008)K 68.735 0.0073985 2310900.0 936.13 829.45 836.53 876.98 995.44 954.01 784.58 868.17 1011.3 823.53 1165.5 True False 1094.1258578188929 871.6654621326045 955.1625328073384 1091.8401393691277 849.0120946513939 1054.9627049794146 927.1280302319828 991.2357561591178 782.2421647142517 637.4940010335753 876.074183836404 1.2488963583284944 0.9949676388311166 1.0902758584034513 1.2462873116382291 0.9691098200537049 1.204193348512614 1.0582757115065413 1.1314518501371784 0.892894893088558 0.727671255237695 1.0 9.774909228689612 -8.75318053681032 24.9981565457714 0.9494225871658912 1.1131161276808785 0.4499848535077947 0.11198833399281916 124.53514479800975 376947.1249436253 0.01455360049056091 0.016367023554564805 1.7653038289191121e-09 8.75318053681032 0.1636935405149873 LLGGLAVR ddPTM_A549_MK2206_60min_R1 2 LLGGLAVR 8 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;H0YF32 P23396 RPS3 40S ribosomal protein S3 0 ; 77.72 0.012228 6603500.0 1667.59 1686.1599999999999 1644.19 1413.3600000000001 2138.46 1431.59 1686.56 1656.82 2548.5 2175.8999999999996 2255.7 False True 1949.03842333886 1771.978341828335 1877.36086549974 1759.6332634481405 1823.8953668008326 1583.0799035874668 1992.986120813751 1891.679308798448 1971.2688191182328 1684.3626787718192 1695.5474358470826 1.149503919579304 1.0450774212300749 1.1072299281098112 1.0377965406606515 1.0756970452375627 0.9336688966160195 1.1754233934588036 1.1156746598796154 1.162614962838478 0.9934034537525778 1.0 10.727535431457774 LLGGLAVR ddPTM_A549_PD325901_60min_R1 2 LLGGLAVR 8 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;H0YF32 P23396 RPS3 40S ribosomal protein S3 0 ; 107.55 0.0050393 13709700.0 2355.99 2699.82 2263.86 2368.8999999999996 3170.3 2890.1000000000004 2435.2 2667.5 2750.0 2547.44 2937.2 False True 2595.1683704118304 2927.3433064191154 2417.499153296084 2515.221572837754 2947.629064941257 2866.563983809602 2527.8728685925726 2614.2946198867317 2634.4270633826022 2386.594203651169 2575.94302044487 1.0074634220611138 1.1364161719359607 0.938490927054193 0.9764274880596431 1.1442912523865518 1.1128211924946 0.9813388139913143 1.0148883725833495 1.022703935014693 0.926493398615238 1.0 11.330884966223785 -7.7969135470942526 24.999895543959934 1.009369114817531 1.051970939946772 0.15765892636933332 0.06596996486225462 324.06184434332346 228376.64703150617 0.0095458087991514 0.013189659387798713 1.5961968628157047e-08 7.7969135470942526 0.042601825129241044 LLGGTRT(ph)PINDAS ddPTM_A549_MK2206_60min_R1 2 LLGGTRTPINDAS 13 1 Q8N357 Q8N357 SLC35F6 Solute carrier family 35 member F6 1 LLGGT(0.002)RT(0.998)PINDAS;LLGGT(0.301)RT(0.674)PINDAS(0.025) 138.01 4.1414e-08 152046000.0 5826.7 7295.700000000001 8399.7 6411.0 9652.4 7453.9 7385.9 6635.700000000001 10136.8 10353.2 11035.5 True False 6810.104510862106 7667.019967545773 9590.903765342307 7981.695287800726 8232.544746456964 8242.666750501628 8727.822425361855 7576.330795978961 7840.830985143308 8014.404929390323 8295.08078569424 0.8209810955195114 0.9242851475019237 1.1562158360028096 0.9622203199715691 0.9924610692948133 0.9936813110629369 1.0521684659676764 0.9133522616253671 0.9452386526079005 0.9661635777209099 1.0 13.018040316301684 -5.51931750485578 24.999843755404992 0.9874028688969614 0.8468070509116966 0.41187806116656667 0.06173966911810948 91.41528122518702 641720.9512750495 0.008261293671902583 0.03347765098884537 3.0247013150527323e-06 5.51931750485578 -0.14059581798526477 LLGGTRT(ph)PINDAS ddPTM_A549_PD325901_60min_R1 2 LLGGTRTPINDAS 13 1 Q8N357 Q8N357 SLC35F6 Solute carrier family 35 member F6 1 LLGGT(0.005)RT(0.995)PINDAS;LLGGT(0.005)RT(0.995)PINDAS 163.26 3.293e-18 245050000.0 21361.0 22738.0 22417.0 21783.0 25639.0 23481.0 22785.0 22866.0 23100.0 24047.0 25420.0 True False 23529.55299486292 24654.21105901793 23938.352424371784 23128.486437217605 23838.20508974825 23289.77852110073 23652.09564343041 22409.919691970008 22129.18733241386 22528.668316113308 22293.50115065659 1.055444491910591 1.105892290870239 1.0737816488580911 1.0374542016042385 1.0692894278315799 1.0446891389428437 1.0609412798641458 1.0052220842534636 0.9926295193773146 1.010548686985839 1.0 14.444335586368595 -8.275138605724319 2.953114252397897 0.996423763853484 1.0652521514183755 0.7470615892932317 0.017252423488984446 0.08883616936269145 1.567351142571025 0.002839418789363703 0.0035898944299265407 5.307150387122077e-09 8.275138605724319 0.06882838756489151 LLGHS(ph)PVLR ddPTM_A549_MK2206_60min_R1 3 LLGHSPVLR 9 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 LLGHS(1)PVLR;LLGHS(1)PVLR;LLGHS(1)PVLR 108.7 0.00013329 50144800.0 1586.08 1694.76 1752.0 1709.98 2905.46 2121.38 1941.81 1738.1599999999999 2954.96 3100.8100000000004 3332.09 True False 1853.77152806703 1781.0160450947642 2000.4599446265606 2128.9251767639194 2478.0706828395887 2345.863023541923 2294.6117418042354 1984.5495028917512 2285.6662781014784 2400.3348673939263 2504.6400919943744 0.740134893628938 0.7110866151138671 0.7987015583678734 0.8499924534341843 0.9893919253150543 0.9366068326703093 0.9161442991903482 0.792349171936919 0.9125727426496103 0.9583552044328282 1.0 11.290387592753465 -3.123843858680853 0.23742980669624966 0.97501464379032 3.534371633566341e-17 0.6072909176383767 0.060005829426069274 13.914355947373346 0.26497739544234666 0.03651117581469341 4.835349770621813 0.0007518931725840767 3.123843858680853 -0.97501464379032 LLGHS(ph)PVLR ddPTM_A549_PD325901_60min_R1 6 LLGHSPVLR 9 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 LLGHS(1)PVLR;LLGHS(1)PVLR;LLGHS(1)PVLR;LLGHS(1)PVLR;LLGHS(1)PVLR;LLGHS(1)PVLR 109.66 0.00015341 78562100.0 3865.34 4201.68 3733.5600000000004 3572.7780000000002 4637.6900000000005 4463.37 3515.5099999999998 4406.09 4880.02 4468.66 4840.12 True False 4257.746471287089 4555.770319397241 3986.9418333201384 3793.4603826924426 4311.954653561941 4427.021794545609 3649.2946568108864 4318.2070784392645 4674.9297301266815 4186.508044973716 4244.815924048622 1.0030461974016847 1.073255095371023 0.9392496411287187 0.8936689954447576 1.0158166409838765 1.0429243278759666 0.8597062209779549 1.0172895964639719 1.101326845209303 0.9862637437952096 1.0 12.051486277493352 -8.517932273084579 24.939069341242366 1.0484519186556274 0.9758897105778807 0.10614215538646454 0.06530860442712974 259.48402326890755 1308268.4805730325 0.01136123277914699 0.013053328385451089 3.03436434727304e-09 8.517932273084579 -0.07256220807774671 LLGLTPPEGGAGDRS(ph)EEEASSTEKPTK ddPTM_A549_MK2206_60min_R1 4 LLGLTPPEGGAGDRSEEEASSTEKPTK 27 2 V9GYY5;Q9UGY1 V9GYY5 NOL12 Nucleolar protein 12 1 LLGLTPPEGGAGDRS(0.982)EEEAS(0.007)S(0.009)T(0.002)EKPTK;LLGLTPPEGGAGDRS(1)EEEASSTEKPTK;LLGLTPPEGGAGDRS(1)EEEASSTEKPTK;LLGLTPPEGGAGDRS(0.612)EEEAS(0.11)S(0.136)T(0.136)EKPT(0.006)K 169.65 6.0712e-49 184252600.0 8499.05 10252.159999999998 10327.800000000001 8717.9 12822.900000000001 9580.600000000002 9623.729999999998 9358.22 12929.8 14896.100000000002 13871.699999999999 True False 9933.481858177449 10773.951153484115 11792.437337964717 10853.785891361402 10936.668396392915 10594.41273291242 11372.23716942114 10684.776343346786 10001.220944647808 11531.06066420924 10426.974050556364 0.9526715814208262 1.033276874119509 1.1309548945636336 1.0409334327232036 1.0488822877438115 1.0160582237516091 1.0906555549367976 1.0247245549418689 0.9591681053540324 1.1058875382541078 1.0 13.348032922292935 -8.585028018465316 5.73197508439121 0.9809366099315969 1.047315839978582 0.0 0.05682399932785534 0.17108690783608269 11.072800329817204 0.007263406696189116 0.00826092222216124 2.5999918195406415e-09 8.585028018465316 0.0663792300469851 LLGLTPPEGGAGDRS(ph)EEEASSTEKPTK ddPTM_A549_PD325901_60min_R1 4 LLGLTPPEGGAGDRSEEEASSTEKPTK 27 2 V9GYY5;Q9UGY1 V9GYY5 NOL12 Nucleolar protein 12 1 LLGLTPPEGGAGDRS(0.998)EEEAS(0.002)STEKPTK;LLGLTPPEGGAGDRS(0.997)EEEAS(0.001)S(0.002)TEKPTK;LLGLTPPEGGAGDRS(1)EEEASSTEKPTK;LLGLTPPEGGAGDRS(1)EEEASSTEKPTK 305.62 5.251099999999998e-190 335378000.0 28501.9 28904.3 31231.899999999998 32072.4 38017.1 36170.799999999996 34275.6 36872.1 36749.399999999994 37704.3 35620.8 True False 31395.3919060102 31340.16680064968 33351.484546671614 34053.43930629471 35346.91004787506 35876.236997190514 35579.976714328004 36136.657039897145 35204.95051748095 35323.64406334392 31239.66741885559 1.0049848317866732 1.0032170439091623 1.0676004996948647 1.0900704815359459 1.131475235441861 1.1484193002495406 1.1389358355605506 1.156755497918196 1.1269310279606883 1.1307304776882268 1.0 14.931091474011358 -5.834999549766248 3.45030370612892 1.0865723576431836 1.0022571859033662 0.3577435485155095 0.047325676691393766 0.28747099633134515 6.7054046992108445 0.009036934949518946 0.03426590138941536 1.4621786902988103e-06 5.834999549766248 -0.0843151717398174 LLGPS(ph)SER ddPTM_A549_MK2206_60min_R1 1 LLGPSSER 8 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3;H7BZD4 A0A087WVF7 ITSN2 Intersectin-2 1 LLGPS(0.5)S(0.5)ER 66.27 0.0085585 2860400.0 1133.6 1365.3 973.52 945.54 1525.7 895.79 1164.4 968.14 1448.9 1426.7 1554.7 True False 1324.923966140917 1434.7879383322017 1111.5797747105298 1177.1973424469043 1301.2715510825687 990.5819032227223 1375.9564077622688 1105.3768098044018 1120.726463417857 1104.4074791138169 1168.6250824628548 1.1337459601232118 1.2277572678043276 0.951185963224319 1.0073353380076213 1.113506436418568 0.8476473062986891 1.1774147486741147 0.9458780462548703 0.9590128435853419 0.9450485837479198 1.0 10.190596444277968 -5.7626892746426694 24.99999984560627 0.991381938693965 1.180751645901126 0.4103456447318009 0.0862401421720441 19.17748655361753 383625.3218628001 0.010423716939209415 0.035279250611178856 1.7270731217795782e-06 5.7626892746426694 0.18936970720716106 LLGPSETS(ph)SLR ddPTM_A549_PD325901_60min_R1 1 LLGPSETSSLR 11 0 H7C3M7 H7C3M7 FARP2 1 LLGPS(0.025)ET(0.103)S(0.436)S(0.436)LR 59.265 0.0098031 4027200.0 2170.6 2465.2 2550.1 3214.5 2901.6 3516.8 2752.0 2890.8 3734.7 2577.0 2628.0 True False 2390.957714088736 2672.9510556201512 2723.1651209970346 3413.052364340817 2697.801625976581 3488.1603467913224 2856.7288659521832 2833.140726211271 3577.7435467690957 2414.287780206427 2304.772660264577 1.0373941670300206 1.1597460789531011 1.1815330717626735 1.4808629168436138 1.1705283008984 1.5134509389706565 1.239484012980371 1.2292495372997179 1.552319501376933 1.047516669140495 1.0 11.170408736798604 -5.685077249708037 2.1183948157596175 1.2857700316470964 1.055199344362553 0.14601416560213543 0.17193189977695564 0.6161759573190995 4.968977652834085 0.029436314021135924 0.1943110538320721 2.0650128109981743e-06 5.685077249708037 -0.23057068728454344 LLGPSLTS(ph)TTPASSSSGSSSR ddPTM_A549_PD325901_60min_R1 1 LLGPSLTSTTPASSSSGSSSR 21 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 LLGPSLT(0.057)S(0.399)T(0.325)T(0.219)PASSSSGSSSR 95.76700000000001 1.2212e-06 4234100.0 1184.5 1156.9 1101.6 1301.9 1602.0 1556.3 1254.6 1239.3 1419.2 1517.1 1456.0 True False 1304.749568017187 1254.3960231409026 1176.3612004589359 1382.3154061705732 1489.4810465999733 1543.6260087896196 1302.3444895434627 1214.5811892879574 1359.5559594009428 1421.3100470900943 1276.9212303444538 1.0217933080063415 0.9823597519813536 0.9212480554823327 1.082537726933782 1.1664627474305371 1.2088654899826683 1.0199098100923194 0.9511794153193929 1.0647140380258209 1.1130757428997333 1.0 10.318453816674971 -6.272180525722549 24.794002965534617 1.0499667090952347 0.9758563073902773 0.21189559752687648 0.07530232494237744 919.154832154628 2121706.6613274594 0.011424268182204265 0.026799866409110678 5.343422000854332e-07 6.272180525722549 -0.07411040170495742 LLGPSLTST(ph)TPASSSSGSSSR ddPTM_A549_MK2206_60min_R1 1 LLGPSLTSTTPASSSSGSSSR 21 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 LLGPSLT(0.013)S(0.076)T(0.453)T(0.453)PAS(0.003)S(0.001)S(0.001)SGSSSR 66.98899999999999 0.0012315 2432100.0 650.09 760.27 829.0 642.86 988.47 532.67 639.3 890.1 1119.0 896.14 1071.4 True False 759.8092988254666 798.9644956242753 946.5646655795767 800.3607288590819 843.0673724182907 589.0367858422709 755.4525347667629 1016.2744008169255 865.5482866758102 693.7013516037397 805.3418108642835 0.9434618798818455 0.9920812316534713 1.1753576590835815 0.9938149467244771 1.0468441611314339 0.7314121505874921 0.9380520476839767 1.261916849599888 1.07475890981857 0.8613750611796344 1.0 9.653457425393022 -11.421909696887953 2.2357103789187662 0.9996588212108929 1.0295075745634108 0.005486061909411144 0.13633662259229845 2.5636550814032435 23.21224244688117 0.1069544161524439 0.01931002798333163 3.7852128269224184e-12 11.421909696887953 0.02984875335251791 LLGPSLTSTT(ph)PASSSSGSSSR ddPTM_A549_PD325901_60min_R1 1 LLGPSLTSTTPASSSSGSSSR 21 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 LLGPSLT(0.003)S(0.122)T(0.122)T(0.753)PASSSSGSSSR 125.18 2.6285e-15 3664600.0 1346.4 1202.2 1522.2 1088.1 1685.3 1266.4 1396.7 2013.5 1516.7 1514.8 2138.1 True False 1483.0855368327059 1303.5136131212669 1625.5056457322005 1155.3094657456038 1566.9303419693722 1256.0868582735818 1449.852182803567 1973.3391629398066 1452.9583734663256 1419.1552694826155 1875.127254532608 0.7909252736035657 0.6951600804534085 0.8668775102078989 0.6161232326781869 0.8356394682983493 0.669867527783693 0.7732020209822802 1.0523761297638856 0.7748585435757469 0.7568314449337746 1.0 10.872772791339075 -14.999999999999865 0.16695809166078468 1.8718394265475846 0.7205664546265517 0.0 0.12638778517199803 40.46853239587046 0.4292969838616447 11.565640440785028 0.1420458848586531 1.0000000000003109e-15 14.999999999999865 -1.151272971921033 LLGRNS(ph)NSK ddPTM_A549_MK2206_60min_R1 2 LLGRNSNSK 9 1 O75534;O75534-4;E9PLT0;O75534-2;O75534-3 O75534 CSDE1 Cold shock domain-containing protein E1 1 LLGRNS(0.999)NS(0.001)K;LLGRNS(1)NSK 110.66 9.8255e-05 37073000.0 12290.3 14741.5 13733.9 13461.0 18097.6 14115.2 14005.5 13773.3 19270.9 20364.8 19953.1 True False 14364.602171014218 15491.779383962617 15681.573535106572 16758.94560428725 15435.467013745745 15608.861095088563 16550.118059871562 15725.707453962206 14906.071919303738 15764.377536032143 14998.194592454858 0.9577554206584716 1.032909613784853 1.045564080292404 1.117397530814687 1.029155003863656 1.040716000773914 1.1034740186793837 1.0485066957241198 0.9938577491721928 1.0510850115228354 1.0 13.872501226319047 -8.758170563964063 23.1629221090944 0.9970994883104457 1.0498550582517827 0.05750596386928308 0.04228912814901914 32.083751803700636 227344.29771133876 0.006567748269922648 0.0072917539120941404 1.7451366367710851e-09 8.758170563964063 0.05275556994133701 LLGRNS(ph)NSK ddPTM_A549_PD325901_60min_R1 1 LLGRNSNSK 9 1 O75534;O75534-4;E9PLT0;O75534-2;O75534-3 O75534 CSDE1 Cold shock domain-containing protein E1 1 LLGRNS(0.756)NS(0.244)K 68.536 0.0012319000000000002 34498000.0 3793.2 4404.3 4859.4 4443.2 4361.2 4508.6 4733.9 5113.3 4412.5 5156.3 4606.6 True False 4178.2828715937485 4775.465817892196 5189.188105946034 4717.646372760649 4054.8843573232202 4471.883456421565 4914.051154989475 5011.311220193753 4227.057969882085 4830.730338020336 4040.0174036433777 1.0342239782991232 1.1820409024935326 1.2844469682893713 1.16772922030142 1.0036799231771711 1.106897077321677 1.2163440559829952 1.2404182258409187 1.0462969704214713 1.1957201802308761 1.0 11.980145792514383 -8.916014845707881 6.8657736555394795 1.0201929036102877 1.1555282826772035 0.015115303753140186 0.09524270491479618 0.1768693323164044 11.951969388052554 0.014486630377592348 0.015342391649547931 1.2133473732892587e-09 8.916014845707881 0.13533537906691584 LLGRNS(ph)NSKR ddPTM_A549_PD325901_60min_R1 1 LLGRNSNSKR 10 2 O75534;O75534-4;E9PLT0;O75534-2;O75534-3 O75534 CSDE1 Cold shock domain-containing protein E1 1 LLGRNS(0.974)NS(0.026)KR 45.257 0.009848 3946600.0 1327.4 1391.3 965.22 1508.4 1507.4 1958.3 1438.8 1392.9 1556.2 1842.7 2091.0 True False 1462.1566708197677 1508.5497337677737 1030.7256335393743 1601.5704421750472 1401.5254242476894 1942.352254072296 1493.5543213415704 1365.1175167910887 1490.798325831276 1726.3516075228517 1833.8202559411072 0.7973282365503136 0.822626824455919 0.5620647008342762 0.8733519203893456 0.7642654287993093 1.0591835529025122 0.8144496803887062 0.7444118431828082 0.8129468092641424 0.9413963020257385 1.0 10.840636523065854 -14.99999999999983 0.18197504044575066 1.837721809473155 0.7622704334751265 0.25088141610190096 0.11085676734010051 46.056034163264535 0.5148314190858637 13.726560743001102 0.12131885424689041 1.0000000000003927e-15 14.99999999999983 -1.0754513759980286 LLGSSDS(ph)PASASR ddPTM_A549_MK2206_60min_R1 1 LLGSSDSPASASR 13 0 E7EX48;P51957-3;P51957;H7C5M0;K7EL60 E7EX48;K7EL60 NEK4;EIF3G Serine/threonine-protein kinase Nek4 1 LLGS(0.04)S(0.033)DS(0.691)PAS(0.225)AS(0.011)R 64.104 0.0061551999999999996 3407800.0 2338.2 2191.0 1748.3 1866.2 2720.4 2097.3 1715.7 1996.6 3165.2 3091.4 3221.5 True False 2732.8309964984933 2302.5125414823506 1996.2352289900782 2323.4190837769015 2320.2327636920904 2319.2348939249346 2027.4204816194815 2279.624164331058 2448.2872537857697 2393.050592929455 2421.5126411231017 1.1285635887620233 0.9508571222714911 0.8243753078506421 0.9594907927878071 0.9581749540716675 0.9577628687700219 0.8372537261168954 0.9414050232972414 1.0110569782738157 0.9882461698897239 1.0 11.241692818982177 -8.75629102918022 21.707766727180253 1.0052213558318472 0.9387187889905205 0.09253222423206764 0.07452111599922144 34.89386708688293 147125.92809893054 0.012332804047848993 0.013753573251941296 1.7527055861119017e-09 8.75629102918022 -0.06650256684132672 LLHEDLDES(ph)DDDMDEK ddPTM_A549_MK2206_60min_R1 6 LLHEDLDESDDDMDEK 16 0 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK 155.98 1.1728e-20 100439300.0 7796.250000000001 8593.18 7287.97 6623.119999999999 10628.13 8595.51 7708.860000000001 8434.33 11829.31 10624.910000000002 10937.87 True False 9112.066399987758 9030.536157560624 8321.513734383578 8245.78469732315 9064.74615599868 9505.081162962244 9109.4600768999 9629.922106552322 9149.99017252639 8224.73545167953 8221.695009145158 1.1082953563531877 1.0983788802084942 1.0121408937119887 1.002930014814609 1.1025398224959426 1.1560975142460952 1.1079783507862142 1.1712818458773724 1.1129080028325875 1.0003698072637077 1.0 13.00522013954193 -3.519320729185594 1.6391321843192337 1.0709350378329334 12.680185239662963 0.01809735338605445 0.06043475731744884 1385.554725969647 17.236729894748795 0.009685349401168962 59827.856507731565 0.0003024678858864981 3.519320729185594 11.60925020183003 LLHEDLDES(ph)DDDMDEK ddPTM_A549_PD325901_60min_R1 4 LLHEDLDESDDDMDEK 16 0 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK 191.4 3.3067e-35 215368000.0 15108.9 13798.1 13939.8 13647.2 16383.6 14168.4 14542.3 13254.2 15943.7 14031.2 16765.800000000003 True False 16642.744405415695 14960.914311436161 14885.838654827054 14490.156548960029 15232.87245635163 14053.017247918055 15095.715184351895 12989.834583281256 15273.641734710258 13145.26763742043 14703.712887162812 1.1318735977186938 1.0174922773755941 1.0123863794853645 0.9854760263722757 1.0359881598103569 0.9557461680435251 1.0266600892031374 0.8834390798409923 1.0387608797805774 0.8940100869962583 1.0 13.843892880702088 -5.244657160846285 3.273004013861061 1.004858463426435 1.1521856065803153 0.32743354362261157 0.05435328521858548 0.26488773080321776 4.371446416043172 0.005746617462949828 0.10025297985798699 5.693021699287724e-06 5.244657160846285 0.1473271431538803 LLHEDLDES(ph)DDDMDEKLQPSPNR ddPTM_A549_MK2206_60min_R1 4 LLHEDLDESDDDMDEKLQPSPNR 23 1 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 LLHEDLDES(1)DDDMDEKLQPSPNR;LLHEDLDES(1)DDDMDEKLQPSPNR;LLHEDLDES(1)DDDMDEKLQPSPNR;LLHEDLDES(1)DDDMDEKLQPSPNR 170.97 9.4971e-41 28882400.0 6470.99 6506.0199999999995 6693.1 6127.4 8907.300000000001 6119.73 6910.4 6437.800000000001 10290.8 9845.3 11208.599999999999 True False 7563.134911483958 6837.148628541765 7642.2822233904335 7628.613275069434 7597.047969428964 6767.315766651999 8165.930230333547 7350.377864935633 7959.9502310307735 7621.239892142185 8425.195278377278 0.8976806663335457 0.8115121848972293 0.9070747882845944 0.9054523987886406 0.9017058618126395 0.8032236100236015 0.9692274137895512 0.8724281897417743 0.9447793158527108 0.9045772400909933 1.0 13.040494409992968 -9.135082346264726 0.4891919426343693 0.9996835601867796 0.8707989701331577 0.16550780435979062 0.05140650195104849 0.43876205356935133 0.2509531462249931 0.020267080868813462 0.01429263177002619 7.326855959779248e-10 9.135082346264726 -0.12888459005362196 LLHEDLDES(ph)DDDMDEKLQPSPNR ddPTM_A549_PD325901_60min_R1 3 LLHEDLDESDDDMDEKLQPSPNR 23 1 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 LLHEDLDES(1)DDDMDEKLQPSPNR;LLHEDLDES(1)DDDMDEKLQPSPNR;LLHEDLDES(1)DDDMDEKLQPSPNR 257.51 5.500899999999998e-111 103267000.0 5422.0 4680.3 5371.4 5748.799999999999 5557.6 6287.400000000001 5465.2 5978.599999999999 6235.1 6528.6 6710.0 True False 5972.437448534563 5074.72530651428 5735.93550485215 6103.890319527913 5167.25334867916 6236.197498980825 5673.181176672192 5859.352132879033 5973.060430144321 6116.383081822155 5884.712538194566 1.0149072549883484 0.862357383402658 0.9747180457198575 1.0372452825708611 0.8780808433957042 1.0597284843575545 0.9640540875787159 0.9956904597886588 1.015013119396459 1.0393682005916072 1.0 12.522756227563821 -7.022045036114964 0.6965846574560068 1.0066162630961548 0.9461180927052364 0.13622359678810658 0.056336916102658494 1.0912985651214098 0.9730813702873742 0.009524438603482047 0.03283667103711975 9.505062215379031e-08 7.022045036114964 -0.060498170390918427 LLHEDLDES(ph)DDDMDEKLQPSPNRR ddPTM_A549_MK2206_60min_R1 5 LLHEDLDESDDDMDEKLQPSPNRR 24 2 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 LLHEDLDES(0.998)DDDMDEKLQPS(0.002)PNRR;LLHEDLDES(1)DDDMDEKLQPSPNRR;LLHEDLDES(1)DDDMDEKLQPSPNRR;LLHEDLDES(1)DDDMDEKLQPSPNRR;LLHEDLDES(1)DDDMDEKLQPSPNRR 155.95 4.231999999999999e-34 24252100.0 5162.46 5737.38 5569.45 5684.389999999999 7459.93 4548.889999999999 4614.54 4885.0 9085.68 8642.57 8541.849999999999 True False 6033.757037970921 6029.388135668653 6359.281757192008 7077.065805181961 6362.5841791095145 5030.250520491196 5452.942186426743 5577.463709685074 7027.78798684958 6690.207434474449 6420.672901933059 0.9397390476244866 0.9390586045667266 0.9904385185667116 1.1022311700462553 0.9909528605940889 0.7834460028288855 0.849278926011795 0.8686727691743771 1.094556301837731 1.0419791720678127 1.0 12.64850878783667 -8.766643848087037 24.997356597560813 1.0446515866671322 0.9348953257296595 0.27322321869469246 0.08169426346064049 141.85596601481987 681340.3763547516 0.016056581551289084 0.017343220780714406 1.7114182226588031e-09 8.766643848087037 -0.1097562609374727 LLHEDLDES(ph)DDDMDEKLQPSPNRR ddPTM_A549_PD325901_60min_R1 5 LLHEDLDESDDDMDEKLQPSPNRR 24 2 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 LLHEDLDES(1)DDDMDEKLQPSPNRR;LLHEDLDES(1)DDDMDEKLQPSPNRR;LLHEDLDES(1)DDDMDEKLQPSPNRR;LLHEDLDES(1)DDDMDEKLQPSPNRR;LLHEDLDES(1)DDDMDEKLQPSPNRR 155.22 4.5014e-34 23127900.0 6406.15 6914.92 6351.25 6509.6 7388.6900000000005 8417.76 7084.089999999999 7182.05 7134.6900000000005 8376.14 9193.96 True False 7056.497632041628 7497.66457631385 6782.28401816886 6911.683207625751 6869.7339039967255 8349.208553459437 7353.678921512794 7038.798378540771 6834.843790852816 7847.269090919003 8063.161205314353 0.8751527412586961 0.9298666348593169 0.8411445394020798 0.8571927351607861 0.8519901474212062 1.0354758314836312 0.9120094134625578 0.8729576650286449 0.8476630463927765 0.973224879312464 1.0 12.977129850598804 -10.928885561717482 1.166543216514559 1.0004433486759146 0.8893738852479639 0.31993655783304964 0.053090835494694504 0.4380814041018417 1.0523795448954756 0.03931514517254766 0.009107153347964008 1.177916318154649e-11 10.928885561717482 -0.11106946342795065 LLHGAGGHLES(ph)PAR ddPTM_A549_MK2206_60min_R1 3 LLHGAGGHLESPAR 14 0 H7C3A6;H7C2E6;H7C361;Q6NZ36-5;Q6NZ36;Q6NZ36-4;Q6NZ36-3;Q6NZ36-2 H7C3A6 C1orf86;FAAP20 Fanconi anemia-associated protein of 20 kDa 1 LLHGAGGHLES(1)PAR;LLHGAGGHLES(1)PAR;LLHGAGGHLES(1)PAR 133.71 2.0154e-09 17573400.0 2461.6 2978.8999999999996 2252.8 2426.8 3097.8999999999996 2307.25 2103.83 2414.0 3433.5 3215.3 3992.3 True False 2877.0578996581535 3130.5132860893546 2572.2809150997227 3021.3661089431916 2642.2030137633164 2551.4016635714024 2486.0686785833855 2756.191892564948 2655.8177321728294 2488.9614968771684 3000.901728125331 0.9587311282783849 1.0431908705137747 0.8571693271364242 1.0068194105211985 0.8804696898268327 0.8502116679326477 0.8284405501463846 0.9184545654171575 0.8850065656205023 0.8294045331607801 1.0 11.551180359790349 -5.7499213059526335 24.961146211904918 0.9239868259866033 1.0009609833281061 0.18524010671754454 0.065804147683863 302.41394310371027 655356.892088697 0.00933468191466227 0.0355445571275279 1.7786016630015283e-06 5.7499213059526335 0.07697415734150281 LLHGAGGHLES(ph)PAR ddPTM_A549_PD325901_60min_R1 2 LLHGAGGHLESPAR 14 0 H7C3A6;H7C2E6;H7C361;Q6NZ36-5;Q6NZ36;Q6NZ36-4;Q6NZ36-3;Q6NZ36-2 H7C3A6 C1orf86;FAAP20 Fanconi anemia-associated protein of 20 kDa 1 LLHGAGGHLES(1)PAR;LLHGAGGHLES(1)PAR 149.97 6.3174e-14 47787000.0 3203.7 3449.3 2645.0 3111.2 3727.9 3583.6000000000004 2723.9 3559.1000000000004 3433.5 2726.7 4140.0 True False 3528.9372655607126 3739.9846163194043 2824.5056056770923 3303.371757952139 3466.065164556827 3554.4163497387926 2827.559505075273 3488.110958440065 3289.2019353178803 2554.5356966584663 3630.8062456222797 0.9719431516940922 1.0300700074064164 0.7779279351749059 0.9098176918515182 0.9546268597328531 0.9789606245236602 0.778769042959675 0.9606987325874895 0.9059150262517376 0.7035725742012563 1.0 11.826074228862963 -10.726910224307115 0.8708116460825549 1.0025357403291995 0.9169791848860679 0.0 0.11575173826697155 1.0212867380019244 1.309239704357273 0.057852668742464294 0.013277083128554292 1.8753821398184234e-11 10.726910224307115 -0.08555655544313157 LLHIEELR ddPTM_A549_PD325901_60min_R1 1 LLHIEELR 8 0 Q9Y224 Q9Y224 C14orf166 UPF0568 protein C14orf166 0 105.57 0.0021217 2022900.0 152.87 86.23100000000001 146.57 114.88 0.0 107.26 186.95 77.613 0.0 96.694 126.13 False True 168.389249863054 93.49798899772084 156.51712159700998 121.97587668859015 0.0 106.38651012193966 194.06448455296533 76.0649478287794 0.0 90.58872433809873 110.61680960394636 1.5222754160597898 0.8452421411581301 1.4149487962761318 1.1026884351963677 0.0 0.9617571732799661 1.754385117847784 0.6876436601373983 0.0 0.8189417563428523 1.0 6.789426827513062 -8.509255584236328 24.742513424937624 0.5180958782269318 1.0560913142743407 0.16482107267846335 0.48577399992071674 762.677626676881 1385184.3881756188 0.09101111303768325 0.10765998582174112 3.0955969904385132e-09 8.509255584236328 0.5379954360474088 LLHMDS(ph)DDEIPIR ddPTM_A549_MK2206_60min_R1 4 LLHMDSDDEIPIR 13 0 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR 125.22 7.415600000000001e-07 36009000.0 1134.17 1357.48 1687.78 1384.57 1950.35 1361.72 1605.2200000000003 1367.62 2685.3100000000004 2294.9 2381.07 True False 1325.5901682057547 1426.5699337341232 1927.1325829576583 1723.7897121557087 1663.4560986130232 1505.81630656342 1896.8676956957659 1561.484323160594 2077.091572558912 1776.4804961227294 1789.7846048111069 0.7406422899394963 0.7970623559390169 1.0767399483587843 0.9631269078536056 0.9294169220930267 0.8413394005712455 1.0598301553141143 0.8724425939094456 1.160526002389057 0.9925666425710586 1.0 10.805570258593526 -8.752452229845032 24.997201778280353 1.0758039475575105 0.9169772399507958 0.2532881172205006 0.10498752509005517 173.83389231484296 483507.6078389011 0.01866477358677013 0.021015203800157957 1.7682667072631257e-09 8.752452229845032 -0.1588267076067147 LLHMDS(ph)DDEIPIR ddPTM_A549_PD325901_60min_R1 8 LLHMDSDDEIPIR 13 0 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR 176.89 1.3616999999999998e-22 79061500.0 4015.42 3617.7000000000003 3471.6099999999997 3878.5099999999998 4965.8099999999995 4787.639999999999 4025.4 4240.98 4213.28 4542.0599999999995 4806.510000000001 True False 4423.062482404029 3922.576275319257 3707.2143310868264 4118.0767539646895 4617.02863671449 4748.651047176983 4178.588799783399 4156.39032691555 4036.2104936758737 4255.2735564471905 4215.3397409772815 1.0492778172557424 0.9305480735485984 0.8794580173571842 0.9769264180376497 1.0952921758197551 1.1265168026708232 0.9912816182200862 0.9860155010784338 0.9575053831224815 1.009473451233767 1.0 12.04143319646307 -4.804432231873338 7.816915080510263 0.9882935411673035 3.1098605684914697 0.04351198053439065 0.06565166447308125 19890.525389169467 16586.165429231027 0.009506652578410513 722321.9607761898 1.5688006771861097e-05 4.804432231873338 2.1215670273241662 LLHMDS(ph)DDEIPIRK ddPTM_A549_PD325901_60min_R1 2 LLHMDSDDEIPIRK 14 1 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 LLHMDS(1)DDEIPIRK;LLHMDS(1)DDEIPIRK 79.02199999999999 0.00025745 7207700.0 1008.89 939.39 924.01 1133.16 1385.81 1650.54 1173.25 1349.62 1303.07 1322.87 1214.04 True False 1111.311770094437 1018.555692089492 986.7188751235124 1203.152719606918 1288.4754863849619 1637.0985494747931 1217.8986707770343 1322.7007703435916 1248.3064994479894 1239.3437624375938 1064.7207764336408 1.0437588846691392 0.9566411350600463 0.9267395705647808 1.1300171333529951 1.2101534175944266 1.5375848632900477 1.1438667280040067 1.2422982622486933 1.1724261675716352 1.1640082450432359 1.0 10.056259417205558 -6.303203602607932 8.201481114627269 1.1434931019439105 0.9738980530178466 0.2974253809734789 0.13448043956795253 0.4038557599200582 74.30061107514844 0.0222762616441132 0.052210392845795706 4.975037943854657e-07 6.303203602607932 -0.16959504892606392 LLHPS(ph)PDLVSQEATLSEAR ddPTM_A549_MK2206_60min_R1 4 LLHPSPDLVSQEATLSEAR 19 0 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR 139.26 6.6836000000000004e-18 67768000.0 3193.8999999999996 4507.55 4268.94 3337.29 5640.9 4602.17 4612.41 4169.030000000001 7030.3 6515.9 6280.5 True False 3732.952236642093 4736.9650416972945 4874.339883569694 4154.926199816641 4811.1310824550455 5089.168574726796 5450.425192997912 4760.0027696189045 5437.948275082172 5043.953664510911 4720.878517018048 0.7907325348842104 1.0034075277771408 1.032506950983475 0.8801171614221305 1.0191177479173952 1.0780130343073049 1.154536210442603 1.0082874940458264 1.1518932875478995 1.0684353868306982 1.0 12.204839643022204 -6.982659665654366 4.686774086014066 1.0747398127057102 0.9396900123541501 0.4664932877999639 0.07442587223939168 0.15980753482340637 9.057674190522244 0.011841463527189183 0.022277236369214172 1.0407354174033678e-07 6.982659665654366 -0.1350498003515601 LLHPS(ph)PDLVSQEATLSEAR ddPTM_A549_PD325901_60min_R1 7 LLHPSPDLVSQEATLSEAR 19 0 A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22 A0A087WU05 CMIP C-Maf-inducing protein 1 LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(1)PDLVSQEATLSEAR;LLHPS(0.996)PDLVS(0.004)QEATLSEAR 193.87 2.869e-45 140589400.0 9911.41 9857.23 9518.95 8552.509999999998 12162.4 10921.580000000002 9284.89 11142.3 11110.5 10306.05 10962.029999999999 True False 10917.609046805594 10687.933366051697 10164.963189096396 9080.779118540506 11308.154982002196 10832.638273518305 9638.231569836758 10920.058085534749 10643.564322804517 9655.324244158508 9613.769804033524 1.135622057668266 1.111731774726653 1.0573337406967676 0.944559658036601 1.1762456572714879 1.1267836129146132 1.0025444509595989 1.1358768004777027 1.107116619157964 1.0043223876764296 1.0 13.230886544081807 -10.796565389049762 1.014030087549183 0.9993560901839876 1.0876665357787396 0.21746067897286514 0.06302929014769172 0.6969185501653311 1.2576999569387695 0.044476526547317985 0.010820718150593723 1.5974769886630895e-11 10.796565389049762 0.08831044559475199 LLHQFS(ph)FSPER ddPTM_A549_PD325901_60min_R1 2 LLHQFSFSPER 11 0 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 LLHQFS(0.689)FS(0.311)PER;LLHQFS(0.5)FS(0.5)PER 59.57 0.0092263 3612700.0 3591.1 3440.8 3946.4 4390.3 5047.2 4877.1 3649.2 4767.7 4642.5 4665.0 5041.7 True False 3955.6658283719066 3730.768291488652 4214.226435631032 4661.478859905271 4692.702083894747 4837.382514597354 3788.072302918859 4672.604483311707 4447.391869728633 4370.451103866119 4421.602861969529 0.8946225954381443 0.843759244770084 0.9530992644947481 1.0542509143005423 1.061312431348586 1.0940336944785274 0.8567192534409401 1.0567671111987595 1.0058325020505383 0.988431399268494 1.0 12.110353736139878 -5.952406125885794 4.394632629094163 1.00965384671431 0.8711147923259478 0.46657807554360764 0.05984608202860163 0.12702810560667824 5.296387899053203 0.007761702272774863 0.025340957439512816 1.1158193131297056e-06 5.952406125885794 -0.13853905438836212 LLHQFSFS(ph)PER ddPTM_A549_MK2206_60min_R1 2 LLHQFSFSPER 11 0 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 LLHQFS(0.069)FS(0.931)PER;LLHQFS(0.021)FS(0.979)PER 69.352 0.0011105 7998500.0 489.83 630.95 506.43 440.70000000000005 568.6800000000001 453.4 592.7 557.29 627.55 844.95 720.86 True False 572.5013288062854 663.0626599946551 578.2493891308386 548.6715197837746 485.02792532584095 501.3784870574378 700.3859179669327 636.2875641290467 485.4109269914251 654.0752081567392 541.8505672761131 1.0565668163535453 1.2237002229745297 1.067175018451494 1.0125882538832625 0.8951322645357372 0.9253076721463469 1.2925813134934563 1.1742860533074073 0.8958391045553195 1.2071136354895413 1.0 9.081751226641082 -2.4881464774642876 0.1884954096116827 0.9519373503058296 1.6547334965422822 0.0 0.14537961107873465 67.6720992880085 0.8571142555603498 0.13231891682515676 13.437849913549794 0.003249776714618686 2.4881464774642876 0.7027961462364526 LLHQFSFS(ph)PER ddPTM_A549_PD325901_60min_R1 2 LLHQFSFSPER 11 0 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 LLHQFS(0.004)FS(0.996)PER;LLHQFS(0.205)FS(0.795)PER 105.95 5.1024e-05 18277500.0 915.5799999999999 1109.1599999999999 943.5600000000001 1164.6799999999998 1351.27 1177.79 1294.0700000000002 1090.26 1552.59 1384.3 1595.01 True False 1008.5290075856276 1202.632805797359 1007.5956556872131 1236.619638419804 1256.3614568284308 1168.1984687350293 1343.3165419922764 1068.513909007576 1487.3400415771616 1296.8950617538846 1398.833881601447 0.7209783955411624 0.8597395456424973 0.7203111598452798 0.8840360922656999 0.8981491464805618 0.8351230865223425 0.9603116993809072 0.7638604719699054 1.0632713870744885 0.927125857338501 1.0 10.450008930210126 -8.037717814032584 0.5893821652647363 1.032385732802565 0.7911134438257669 0.3398414567471988 0.08609326135712718 0.3963852182522373 0.28836449237470724 0.021048756627537833 0.034540266656442435 9.16816004433003e-09 8.037717814032584 -0.2412722889767981 LLHS(ph)PMTK ddPTM_A549_MK2206_60min_R1 4 LLHSPMTK 8 0 A0A6I8PS19;A0A6I8PL80;Q9NVN8 A0A6I8PS19 GNL3L Guanine nucleotide-binding protein-like 3-like protein 1 LLHS(0.977)PMT(0.023)K;LLHS(1)PMTK;LLHS(0.983)PMT(0.017)K;LLHS(0.982)PMT(0.018)K 78.556 0.001039 73764200.0 8904.5 8821.2 8263.390000000001 7001.820000000001 11744.0 9420.7 9415.22 8532.6 12965.5 12286.8 12837.300000000001 True False 10407.361905876673 9270.161401608448 9435.262957664201 8717.266214323643 10016.47315718273 10417.592221045454 11125.843601418306 9742.122179991573 10028.834951648993 9511.203346446793 9649.444118544028 1.0785452278930865 0.9606938273048614 0.9778037824512378 0.9033956886253217 1.0380362883218688 1.0796054252519294 1.1530035787281234 1.009604497451769 1.0393173770886823 0.9856737061328157 1.0 13.236230119216989 LLHS(ph)PMTK ddPTM_A549_PD325901_60min_R1 5 LLHSPMTK 8 0 A0A6I8PS19;A0A6I8PL80;Q9NVN8 A0A6I8PS19 GNL3L Guanine nucleotide-binding protein-like 3-like protein 1 LLHS(0.977)PMT(0.023)K;LLHS(0.999)PMT(0.001)K;LLHS(0.992)PMT(0.008)K;LLHS(1)PMTK;LLHS(1)PMTK 97.456 0.00075602 87558800.0 10314.300000000001 11113.6 11116.0 11926.4 13705.999999999998 12997.900000000001 12626.7 11544.6 11900.3 11958.699999999999 13479.9 True False 11361.400143013654 12050.182075182589 11870.398605938217 12663.066641180378 12743.337843133097 12892.049411840015 13107.215978095363 11314.333896436508 11400.171775407993 11203.625641115492 11821.957756126505 0.9610421875451064 1.0193051205023813 1.0040975319664467 1.071148019846204 1.0779380290484546 1.0905172965246772 1.108717883152881 0.9570609310097619 0.9643218162829308 0.9476963014276908 1.0 13.52918135002033 -8.282564937413204 24.786400928516677 0.9807243864566788 1.0485117051134203 0.44509404299674493 0.0421421147578626 611.4275970975051 717380.0835946605 0.007263464425828694 0.008785280031530306 5.217170892224785e-09 8.282564937413204 0.06778731865674148 LLIERAT(ph)NQDWMLR ddPTM_A549_PD325901_60min_R1 1 LLIERATNQDWMLR 14 1 Q9NU22 Q9NU22 MDN1 Midasin 1 LLIERAT(1)NQDWMLR 52.555 0.0089975 3098100.0 1829.4 1707.9 1701.0 2056.5 2301.4 1831.9 2080.9 1972.7 2110.2 2318.2 2676.0 True False 2015.1193412668997 1851.8307268755702 1816.440088943944 2183.525334349631 2139.757603398988 1816.9816137645103 2160.089788212173 1933.3529509467871 2021.515632418171 2171.828456373512 2346.868964561647 0.8586416079021643 0.7890643895499547 0.7739844517834946 0.9303993394268923 0.9117499254154807 0.7742151953097602 0.9204134618634915 0.8238009791517708 0.8613670652020208 0.9254153040364445 1.0 11.196521577117736 -11.756583319546985 0.2986503040221492 1.146141329314464 0.8335149766674707 0.32688037161074157 0.05811158083272407 4.104309486487958 0.2796652657627697 0.4643424607922225 0.02338558204848493 1.7515263710308892e-12 11.756583319546985 -0.31262635264699334 LLIVQDAS(ph)ER ddPTM_A549_MK2206_60min_R1 3 LLIVQDASER 10 0 C9JPX5;C9JKL2;O95772-2;O95772 C9JPX5 STARD3NL MLN64 N-terminal domain homolog 1 LLIVQDAS(1)ER;LLIVQDAS(1)ER;LLIVQDAS(1)ER 142.08 4.9294000000000005e-08 13538420.0 2724.34 3069.2400000000002 3196.55 2468.95 3928.55 3485.06 2695.35 3545.1099999999997 4680.8 4282.41 4294.799999999999 True False 3184.1419882818846 3225.451206216016 3649.8688561621166 3073.842860835375 3350.665499118716 3853.846736004401 3185.060205824485 4047.640198944041 3620.606273701639 3315.010606737085 3228.2826295500527 0.9863268968881079 0.9991229320171291 1.1305914862450637 0.9521603941052079 1.037909589590587 1.193776127507627 0.9866113259942201 1.2538060211624618 1.1215270436858458 1.0268650509076152 1.0 11.656551173810923 -7.0149782222852 24.693464146522242 1.0792434041765029 1.0202743399619323 0.1476134890488291 0.08601831854278896 1179.098188446818 1943891.6223905117 0.013107302240919471 0.0232118593232174 9.660993228657903e-08 7.0149782222852 -0.0589690642145706 LLIVQDAS(ph)ER ddPTM_A549_PD325901_60min_R1 2 LLIVQDASER 10 0 C9JPX5;C9JKL2;O95772-2;O95772 C9JPX5 STARD3NL MLN64 N-terminal domain homolog 1 LLIVQDAS(1)ER;LLIVQDAS(1)ER 158.56 1.1967e-08 33547000.0 6535.1 7018.4 6993.6 6445.0 7849.9 6807.4 7182.299999999999 6621.9 6989.5 8135.6 7242.4 True False 7198.538541113656 7609.865199076944 7468.227751933203 6843.093012342996 7298.550104684852 6751.962791386276 7455.626356805367 6489.8210097199435 6695.7556216409885 7621.916827569817 6351.63071335623 1.1333370697979253 1.1980962909375217 1.1757969077498458 1.0773757671322606 1.1490828787223786 1.063028235754989 1.1738129455680808 1.0217566641702147 1.054178985494407 1.1999936979242865 1.0 12.632911320647835 -7.816381875444606 0.2709705391065708 0.9897250449648359 1.201323798370875 0.0 0.07227785569877698 0.9160031995280923 0.1704084397812615 0.03361883465512049 0.06777237356888141 1.5262234586852742e-08 7.816381875444606 0.21159875340603918 LLKEETETFPSKYESDTGNLS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 LLKEETETFPSKYESDTGNLSPSK 24 2 A0A0U1RR07;Q9HCH5-7;A0A0U1RQP0;Q9HCH5-12;Q9HCH5-8;A0A0U1RRJ3;Q9HCH5-11 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 LLKEETETFPS(0.003)KYES(0.003)DT(0.019)GNLS(0.956)PS(0.019)K;LLKEETETFPS(0.001)KY(0.001)ES(0.003)DT(0.047)GNLS(0.828)PS(0.121)K 69.42699999999999 3.3509e-05 5130300.0 2768.8 3380.7 3518.3 2958.1 4816.0 3153.2 3000.6000000000004 3271.0 4758.8 4084.5 4793.4 True False 3236.105749339249 3552.763189862798 4017.2478442806087 3682.834632794156 4107.572779716622 3486.869531075238 3545.770179604485 3734.6742670173735 3680.939398242043 3161.808613191551 3603.066488890105 0.8981532145792027 0.9860387536054593 1.1149524597083105 1.0221389597305552 1.1400213657955354 0.9677505374454911 0.9840979039764348 1.0365266026960853 1.021612953741502 0.8775326858221593 1.0 11.81500955932631 -10.578817103791708 0.57011633493564 0.9971841286856733 1.0231686768451937 0.04431393426668828 0.0732474404641006 5.63677089020627 2.7645244474340642 0.07564313466922065 0.014217975639471352 2.6374418686401147e-11 10.578817103791708 0.02598454815952045 LLKEETETFPSKYESDTGNLS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 LLKEETETFPSKYESDTGNLSPSK 24 2 A0A0U1RR07;Q9HCH5-7;A0A0U1RQP0;Q9HCH5-12;Q9HCH5-8;A0A0U1RRJ3;Q9HCH5-11 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 LLKEETETFPS(0.01)KY(0.001)ES(0.046)DT(0.297)GNLS(0.511)PS(0.135)K 52.577 0.0013682 5295600.0 1924.8 2196.5 2084.0 1785.8 2456.4 1967.2 1870.9 2180.1 2146.7 1895.7 1853.1 True False 2120.2042790371315 2381.6067636174207 2225.432772110041 1896.1048101539375 2283.870938119959 1951.1797754230813 1942.0981232957636 2136.616195244635 2056.481664350339 1776.0051784778148 1625.1804477687551 1.3045962261901471 1.4654414326034868 1.3693450319103857 1.1667041729163923 1.4053029872809104 1.2005926960922386 1.1950046076188718 1.3146947455453584 1.265386663477109 1.0928049133966202 1.0 10.66638419766348 -14.619715640429746 0.15405565099734425 3.6707408606269957e-11 1.3974349599879936 0.5824085251493945 0.08531106693255712 22.348635504450463 0.25005431106465853 6.857346586545173 0.1456188859705607 2.4004040982353045e-15 14.619715640429746 1.3974349599512863 LLKEGEEPTVYS(ph)DEEEPK ddPTM_A549_MK2206_60min_R1 1 LLKEGEEPTVYSDEEEPK 18 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPT(0.003)VYS(0.997)DEEEPK 189.64 1.4111e-40 11047000.0 5155.4 6026.0 4886.1 4368.1 7804.7 5528.2 6878.3 5449.7 8669.5 6323.4 6742.8 True False 6025.505482571352 6332.697660872954 5579.022451735065 5438.284696091461 6656.638968823569 6113.190454677829 8127.998075842679 6222.211664006294 6705.872092346686 4894.939548207966 5068.376668187131 1.1888432681793102 1.2494528476191664 1.100751348405718 1.0729835314384082 1.3133670610169017 1.2061436737819269 1.6036689078102635 1.2276537580684328 1.3230808464646449 0.9657805385563026 1.0 12.30730803035874 -10.81844992333981 1.0609785224969328 0.999825618199006 1.2576308426347034 0.3739445440479787 0.13387853268424282 0.4963986193987009 0.9905782426935007 0.09490791870325427 0.02344058308983784 1.5189730782968268e-11 10.81844992333981 0.2578052244356974 LLKEGEEPTVYS(ph)DEEEPK ddPTM_A549_PD325901_60min_R1 2 LLKEGEEPTVYSDEEEPK 18 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPT(0.003)VYS(0.997)DEEEPK;LLKEGEEPTVYS(1)DEEEPK 227.38 1.0653999999999997e-64 40463000.0 14437.7 14246.7 15956.5 16313.5 17563.7 18414.7 17868.199999999997 17375.6 16931.6 17266.8 18971.3 True False 15903.404675527008 15447.319407798 17039.404044229323 17321.14784435337 16330.08630347562 18264.736788574315 18548.184128854213 17029.030027105502 16220.023733225045 16176.57130122947 16637.95036897921 0.9558511909723127 0.928438844041686 1.0241287938927024 1.0410625984705395 0.9814962745605017 1.0977756504568124 1.114811843857676 1.0235052785621626 0.9748811225850648 0.9722694768575603 1.0 14.02219009820646 -5.761687736155088 24.999999788724374 1.0109142210854196 0.9421450027545103 0.28489216314095045 0.04645013641195923 7.313313505116966 736589.4028898862 0.007163444943887893 0.024524738844476403 1.7310605687719498e-06 5.761687736155088 -0.06876921833090932 LLKEGEEPTVYS(ph)DEEEPKDESAR ddPTM_A549_MK2206_60min_R1 10 LLKEGEEPTVYSDEEEPKDESAR 23 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.001)VYS(0.999)DEEEPKDESAR;LLKEGEEPT(0.002)VYS(0.998)DEEEPKDESAR;LLKEGEEPT(0.002)VYS(0.998)DEEEPKDESAR 327.07 2.5181999999999988e-197 9597352900.0 98450.39 116555.96000000002 115671.56999999999 102055.88999999998 149477.8 113083.00999999998 109031.04999999999 99028.46 169579.9 167143.0 161096.7 True False 115066.4089510589 122488.16051324319 132075.53796636255 127059.58763146323 127489.81363204443 125049.37905977284 128840.58046422906 113066.04746693953 131170.3234134541 129385.28021414475 121091.94334726551 0.9502400058199852 1.0115302234598187 1.0907045862464892 1.0492819267676943 1.0528348138441483 1.0326812470187077 1.0639896999153953 0.9337206451686927 1.0832291545382668 1.0684879327032992 1.0 16.885743355326973 -5.353088900970715 3.7282155631245146 1.0386083356442297 0.9480353957475114 0.2859303844832569 0.0418063699953978 0.24018524592169668 5.420142301425437 0.005893311327886383 0.048947963165523335 4.435178456262733e-06 5.353088900970715 -0.09057293989671833 LLKEGEEPTVYS(ph)DEEEPKDESAR ddPTM_A549_PD325901_60min_R1 8 LLKEGEEPTVYSDEEEPKDESAR 23 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.001)VYS(0.999)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.001)VYS(0.998)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.001)VYS(0.999)DEEEPKDESAR;LLKEGEEPT(0.027)VYS(0.973)DEEEPKDESAR 306.35 6.049399999999999e-176 15295881000.0 86495.70000000001 96396.7 91830.5 109866.59999999999 105736.5 115658.3 110254.69999999998 114139.6 123591.90000000001 118891.09999999999 113742.9 True False 95276.67978923128 104520.38821324805 98062.66995165602 116652.81035684752 98309.93301112234 114716.4171511871 114450.50294218672 111862.99613721628 118397.76224540966 111384.29565591789 99753.2443756499 0.955123619142042 1.047789361312862 0.9830524366944143 1.1694136976393208 0.9855311837368181 1.1500018657958533 1.1473361458920575 1.121397071717924 1.1869063807042546 1.116598225481949 1.0 16.60607614387735 -6.239500117440259 24.635951128536405 1.0980289484515413 1.0005685475391408 0.3734938024174733 0.06458647475168669 782.9960103347469 879236.9748819355 0.011035608423880409 0.029168953590680037 5.761026627723481e-07 6.239500117440259 -0.09746040091240049 LLKEGEEPTVYS(ph)DEEEPKDESARK ddPTM_A549_MK2206_60min_R1 4 LLKEGEEPTVYSDEEEPKDESARK 24 3 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPT(0.001)VYS(0.999)DEEEPKDESARK;LLKEGEEPTVYS(1)DEEEPKDESARK;LLKEGEEPT(0.001)VYS(0.999)DEEEPKDESARK;LLKEGEEPTVYS(1)DEEEPKDESARK 206.95 7.739699999999998e-63 513468000.0 14785.1 17527.8 17918.5 15304.5 21193.800000000003 15473.7 14173.5 11302.0 25985.399999999998 23494.199999999997 23192.600000000002 True False 17280.463419010302 18419.890152713084 20459.612738465206 19054.103187045104 18076.220095257104 17111.116663389243 16748.64148524435 12904.093110923379 20099.748390156943 18186.843902569453 17433.237336803246 0.9912366295002235 1.0565960754648203 1.173598015285032 1.0929756085417397 1.0368825792956113 0.9815226129725214 0.9607304232522752 0.7402006214692892 1.1529555871831352 1.043228148117692 1.0 14.089552881088318 -5.252459797398589 21.61612217224466 1.044791064030213 0.9912364879369094 0.0 0.11146444902905157 832.2941522921219 2003213.776332645 0.01628383960736053 0.24280177705804928 5.591652870555319e-06 5.252459797398589 -0.053554576093303496 LLKEGEEPTVYS(ph)DEEEPKDESARK ddPTM_A549_PD325901_60min_R1 4 LLKEGEEPTVYSDEEEPKDESARK 24 3 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPTVYS(1)DEEEPKDESARK;LLKEGEEPTVYS(1)DEEEPKDESARK;LLKEGEEPTVYS(1)DEEEPKDESARK;LLKEGEEPTVYS(1)DEEEPKDESARK 227.74 4.5813e-89 770475000.0 25964.199999999997 26300.899999999998 28371.1 31051.7 32023.1 40290.2 37026.1 41568.1 35485.7 37161.8 39173.3 True False 28600.066470166195 28517.369146016586 30296.533455283694 32969.69298547262 29773.90792969763 39962.08996937326 38435.14849695933 40738.99163595637 33994.35943384585 34815.39760592753 34355.232440008505 0.8324806569161759 0.8300735323451511 0.8818608201294473 0.9596702057843639 0.8666484204899259 1.1632024332583257 1.1187567589325795 1.1858162132098875 0.9894958356985994 1.013394325499691 1.0 15.068242223581628 -6.677514081047812 1.4759475462433476 1.0287380566390483 0.8458177714318813 0.552338211611606 0.08158943988294698 0.30117667922153 1.3075127373969626 0.013772333455886262 0.03804847692496676 2.1012896382259095e-07 6.677514081047812 -0.18292028520716697 LLKPGEEPS(ph)EYT(ph)DEEDTKDHNKQD ddPTM_A549_PD325901_60min_R1 1 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 2 LLKPGEEPS(0.982)EY(0.061)T(0.939)DEEDT(0.018)KDHNKQD 69.782 0.000795 10985000.0 2285.6 1934.4 2165.7 2338.3 2715.2 2283.9 2419.4 2658.3 2180.9 2481.4 2684.5 True False 2517.6324294302094 2097.4186767773913 2312.6774254120537 2482.7314803353975 2524.4937189314896 2265.300675624631 2511.4715909464812 2605.278121103993 2089.244357284044 2324.7239805216254 2354.3235184475857 1.06936553523889 0.8908795500460385 0.9823108027808375 1.054541341018622 1.0722798711181853 0.9621875064639989 1.0667487162522664 1.1065930831892992 0.8874075040721965 0.9874275826180942 1.0 11.201096866036812 -8.773922540760923 24.997707239804193 0.9468313296980568 1.0214555756312553 0.17102197423690535 0.0642256685077224 273.9973740049545 548681.6002177513 0.012153860029811036 0.012983631475309529 1.6829742036738854e-09 8.773922540760923 0.0746242459331985 LLKPGEEPS(ph)EYTDEEDT(ph)KDHNKQD ddPTM_A549_PD325901_60min_R1 1 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 2 LLKPGEEPS(0.995)EY(0.003)T(0.285)DEEDT(0.716)KDHNKQD 94.163 8.881900000000001e-07 9786200.0 3050.0 2903.4 2956.2 2455.8 3578.8 2919.4 2940.9 2939.1 3481.5 3287.2 3621.6 True False 3359.6337547086696 3148.079707483187 3156.825509074715 2607.4891884735334 3327.4374341897533 2895.6253743239836 3052.8175588222307 2880.477344820655 3335.1846622423755 3079.6456310029384 3176.1661592139235 1.0577638531165992 0.991157121409011 0.993910693216379 0.8209549053059827 1.0476270029315053 0.9116731396195684 0.9611643112455361 0.9069038584346453 1.0500661788638312 0.9696109953407245 1.0 11.633070672836752 -8.77695393835601 24.999936275873264 1.0236423627829656 0.9599983880357975 0.06900505888898545 0.06607376013853612 299.3438839251499 482356.48051732394 0.010719111823551229 0.011431149724550274 1.671267861009027e-09 8.77695393835601 -0.0636439747471681 LLKPGEEPS(ph)EYTDEEDTKDHNKQD ddPTM_A549_MK2206_60min_R1 1 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPS(0.894)EY(0.013)T(0.093)DEEDTKDHNKQD 99.537 1.805e-08 4131600.0 968.27 1595.9 1170.8 987.82 1431.8 1371.1 1316.9 1020.6 1857.0 1931.9 1343.1 True False 1131.6903040713355 1677.1244933599646 1336.8370451876576 1229.8359443449253 1221.1841166939917 1516.1888919374803 1556.1636837702956 1165.273175456414 1436.3924650196439 1495.4824482371782 1009.5712023257605 1.1209613561324332 1.661224576826631 1.3241632111811144 1.2181765303048844 1.2096067259849885 1.501814719402276 1.5414105317042957 1.154225846351363 1.4227747995491655 1.481304582373208 1.0 9.979526948298084 -10.826673133008189 0.8166949965221811 0.972905999215954 1.360790498348311 0.0 0.21588899746587734 0.5989975909215719 0.6242113939675153 0.15440302650542842 0.028896517371686914 1.4904824509782465e-11 10.826673133008189 0.387884499132357 LLKPGEEPSEYT(ph)DEEDTK ddPTM_A549_MK2206_60min_R1 2 LLKPGEEPSEYTDEEDTK 18 1 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPSEYT(0.997)DEEDT(0.003)K;LLKPGEEPS(0.001)EYT(0.999)DEEDTK 165.4 1.0444000000000002e-23 41571000.0 16578.6 15811.5 15017.1 13817.8 25168.0 20964.0 19383.2 22545.0 26451.0 21607.0 19812.9 True False 19376.6623721452 16616.237813623095 17146.75059044036 17203.16162030462 21465.820539848006 23182.396565223054 22904.876539795256 25740.822791166833 20459.890733567347 16725.96369328677 14892.810121778028 1.3010749625962366 1.1157221288496029 1.1513442023521372 1.1551320052854313 1.4413546110050879 1.556616674466494 1.5379821774737488 1.7284060281897744 1.3738099503228391 1.123089837077026 1.0 13.862328381034343 LLKPGEEPSEYT(ph)DEEDTK ddPTM_A549_PD325901_60min_R1 2 LLKPGEEPSEYTDEEDTK 18 1 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPS(0.005)EYT(0.995)DEEDTK;LLKPGEEPSEYT(0.994)DEEDT(0.005)K 160.97 3.299800000000001e-23 58802000.0 26810.0 24839.0 27337.0 26115.0 29641.0 23384.0 25933.0 26279.0 27126.0 27215.0 27738.0 True False 29531.73146352116 26932.269702478086 29192.253210735213 27728.06423853179 27559.118415898745 23193.5684569405 26919.894506082102 25754.844729523313 25985.988553205996 25496.640255459035 24326.401845669276 1.213978608545372 1.1071209738842953 1.2000234722724596 1.1398341774687117 1.1328892201460108 0.9534319380270185 1.1066122592591527 1.0587198588971898 1.0682216267767595 1.0481056926221126 1.0 14.570235324433373 -2.0000000000000004 0.15866492184576245 0.9937606495496821 1.785877631726607 0.535826330057113 0.05122711268495495 30.99176600380461 0.30114463719633855 0.07460265937243724 5.779605223003492 0.00999999999999999 2.0000000000000004 0.7921169821769248 LLKPGEEPSEYT(ph)DEEDTKDHNK ddPTM_A549_MK2206_60min_R1 6 LLKPGEEPSEYTDEEDTKDHNK 22 2 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK 298.86 7.905299999999997e-157 349575000.0 23697.4 22374.5 23711.199999999997 19351.7 32101.399999999998 30628.5 27647.2 32040.699999999997 34659.9 29807.0 30040.700000000004 True False 27696.941774195293 23513.266480783608 27073.804702642305 24092.867368730815 27379.326584467435 33869.58754044717 32670.338368846617 36582.56734552843 26809.487990486985 23073.57799813944 22580.76510885821 1.2265723344923356 1.0412962699638368 1.1989764107692489 1.066964172940244 1.2125065936639496 1.4999309092126587 1.4468215851565795 1.6200765195142768 1.1872710185524178 1.0218244548803135 1.0 14.462806749630904 -9.670980606843058 1.4167212399635642 1.0426135006108292 1.2787172837197045 0.2632936152000853 0.17040257460853642 0.40336069282903303 1.638551472148902 0.048372134813315946 0.035393998875174054 2.1331401651014147e-10 9.670980606843058 0.23610378310887525 LLKPGEEPSEYT(ph)DEEDTKDHNK ddPTM_A549_PD325901_60min_R1 7 LLKPGEEPSEYTDEEDTKDHNK 22 2 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPS(0.001)EYT(0.999)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPS(0.296)EY(0.001)T(0.701)DEEDT(0.001)KDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK 242.94 2.3801999999999996e-98 494505100.0 28928.800000000003 28850.099999999995 30446.099999999995 27539.7 33453.7 26461.600000000006 30092.2 30023.0 29108.899999999994 31405.1 33353.7 True False 31865.630479743024 31281.39917643474 32512.355433272343 29240.76472180331 31104.027520999687 26246.10550291553 31237.37513808369 29424.167712412123 27885.55416192649 29422.1766263721 29251.40634652457 1.089370887069471 1.0693981275929785 1.1114800788761123 0.9996362012617378 1.0633344309168653 0.8972596117941485 1.0678931046265774 1.0059060875173298 0.9533064438537547 1.005838019472449 1.0 14.836218367677377 -6.591855344655547 1.3730576378859558 0.9828953546857276 1.08912572906049 0.40049692001843606 0.046893501603270514 0.2781746545718094 1.0249901781856043 0.006726806775616328 0.020719366105096306 2.55943824580939e-07 6.591855344655547 0.10623037437476246 LLKPGEEPSEYT(ph)DEEDTKDHNKQD ddPTM_A549_MK2206_60min_R1 7 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEY(0.001)T(0.999)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPS(0.235)EYT(0.765)DEEDTKDHNKQD;LLKPGEEPS(0.006)EY(0.166)T(0.827)DEEDT(0.002)KDHNKQD 311.78 1.2812999999999996e-176 2030081900.0 37532.99 45778.200000000004 43580.100000000006 40136.2 55951.600000000006 41138.700000000004 40382.75 41585.21000000001 65072.799999999996 57725.1 61425.8 True False 43867.6411184963 48108.11484549856 49760.41348905251 49969.57080178246 47721.19375863635 45491.96992834103 47719.77295221722 47480.04086686441 50333.914699908586 44684.95981817688 46172.078594164035 0.9500902375237876 1.0419308878933433 1.0777165552027372 1.0822465074833865 1.033550908073437 0.9852701310720507 1.0335201360904036 1.0283279919926693 1.0901375080451887 0.9677918165855518 1.0 15.49473306125428 LLKPGEEPSEYT(ph)DEEDTKDHNKQD ddPTM_A549_PD325901_60min_R1 4 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 O15173;O15173-2;U3KPU8;U3KQM0 O15173 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD 311.78 1.2812999999999996e-176 2922582000.0 48116.200000000004 49052.0 48705.0 54378.6 62149.6 57428.1 55549.1 61247.100000000006 62194.0 58757.3 60508.200000000004 True False 53000.92120272571 53185.78418800898 52010.414186957576 57737.44261923893 57784.42650048044 56960.42459382586 57663.0513981339 60025.47854307955 59580.202465460934 55047.354050416434 53066.074993082584 0.9987722138792935 1.0022558516894646 0.9801066725537433 1.088029265906048 1.0889146504242666 1.0733868031741733 1.0866274056570144 1.1311460014878463 1.1227550270719568 1.037336076911513 1.0 15.69550222399475 -6.260420184689088 24.97462356093545 1.0713210312101458 0.9945660039907983 0.5294162059860094 0.03513519642008629 83.49787341090428 2046011.6744095343 0.0070028059825361175 0.01749346359898103 5.490094441399535e-07 6.260420184689088 -0.07675502721934746 LLKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LLKSPK 6 1 A0A2R8YDD6;O15265-3;O15265;O15265-2 A0A2R8YDD6 ATXN7 Ataxin-7 1 LLKS(1)PK;LLKS(1)PK 64.836 0.016201 19716300.0 10312.1 9836.2 10642.0 8727.7 15873.400000000001 11140.8 11103.400000000001 11675.7 17092.6 13631.8 14559.3 True False 12052.530373360752 10336.820566192935 12151.195622554707 10865.986891801338 13538.443887365826 12319.71206133548 13120.744055262441 13330.766230331625 13221.153391273425 10552.366912303727 10943.823993761784 1.1013088642718445 0.9445346135030266 1.1103244742862415 0.99288757732171 1.2370853090366796 1.125722788337786 1.1989176783856859 1.2181086097446787 1.2080926556210854 0.9642303200708275 1.0 13.417829312640931 -6.72934961129319 24.999849347144817 1.1274600677027133 1.0358589778927403 0.2041494033986323 0.09281028050730585 290.7449530863485 226506.32693539717 0.014253125502825953 0.029668465887165416 1.864877841565293e-07 6.72934961129319 -0.09160108980997306 LLKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LLKSPK 6 1 A0A2R8YDD6;O15265-3;O15265;O15265-2 A0A2R8YDD6 ATXN7 Ataxin-7 1 LLKS(1)PK;LLKS(1)PK 62.2 0.017158 44941000.0 10955.900000000001 10799.0 10896.1 10809.2 13263.1 11358.5 11608.3 12016.6 12011.4 11569.0 12469.5 True False 12068.134902692698 11709.06962909379 11635.57486957209 11476.85973452567 12331.545611211046 11266.000141898676 12050.060208805491 11776.91948615966 11506.60262876866 10838.531365622111 10935.830550673198 1.1035407733114333 1.0707069366919728 1.0639863900283109 1.0494730767220206 1.1276277146093792 1.0301915423520487 1.1018879775952364 1.0769112992002867 1.052192842185208 0.9911027164694778 1.0 13.416775173400005 -9.856205471437862 0.5811906254280643 0.999847375561618 1.0787335163072693 0.585416963289704 0.02607686341332399 0.4123373499023098 0.2861424831530299 0.014677052057801123 0.005999662200270105 1.3924978348061946e-10 9.856205471437862 0.07888614074565137 LLKT(ph)IGK ddPTM_A549_MK2206_60min_R1 2 LLKTIGK 7 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YNV4;H0YKJ3;E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;F5H6N2;F5H4F6;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 J3KNR0;E7ETY4;Q7KZI7-10 MARK3;MARK2 MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK2 1 LLKT(1)IGK;LLKT(1)IGK 68.893 0.0088809 83844000.0 8005.9 7893.3 8292.1 6861.2 8839.2 8053.0 7648.8 8014.6 11295.2 9917.6 10118.3 True False 9357.100194537381 8295.035254989794 9468.04446737323 8542.194308010967 7538.96538921744 8905.163114851232 9038.487952329135 9150.694093683105 8736.855234727982 7677.207271927659 7605.646859126453 1.2302832839667357 1.0906416520030908 1.2448703762799584 1.1231384346698527 0.9912326365996078 1.1708620291994511 1.1883917462567084 1.2031447506273134 1.1487326977644416 1.0094088529387 1.0 12.892855238827195 -10.496699820346775 0.8049983915553146 0.9991310108297603 1.1521050967412223 0.41969884954053416 0.06745397934466395 0.5071329361678998 0.5880245749691537 0.04600100545781164 0.012995559614330897 3.186399165435567e-11 10.496699820346775 0.152974085911462 LLKT(ph)IGK ddPTM_A549_PD325901_60min_R1 2 LLKTIGK 7 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YNV4;H0YKJ3;E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;F5H6N2;F5H4F6;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 J3KNR0;E7ETY4;Q7KZI7-10 MARK3;MARK2 MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK2 1 LLKT(1)IGK;LLKT(1)IGK 85.73100000000001 0.0053345 139565000.0 7182.799999999999 7316.6 8487.7 7431.3 8423.1 7663.4 7695.0 8200.7 8845.0 8673.7 8593.0 True False 7911.992568302112 7933.195559609932 9063.726362686373 7890.314523293171 7831.4905141175 7600.991811192168 7987.837435865573 8037.130605175303 8473.275409316051 8126.0411017371 7536.115475515032 1.0498767692730175 1.0526902865786785 1.2027053449664586 1.0470002150217759 1.0391946009269826 1.0086087236704269 1.0599409552332621 1.0664818806569614 1.1243558351574983 1.07827980186062 1.0 12.879605356125058 -11.069401577394077 1.3979210041875094 1.0001830144388117 1.077966624118694 0.0 0.05429455941380161 0.5113875802008667 1.7905044812250284 0.03687397258962105 0.008232722797428798 8.523116458351804e-12 11.069401577394077 0.07778360967988229 LLLAADPGGS(ph)PAQR ddPTM_A549_MK2206_60min_R1 2 LLLAADPGGSPAQR 14 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 LLLAADPGGS(1)PAQR;LLLAADPGGS(1)PAQR 146.59 3.7768e-13 7860400.0 2299.1 2319.2 2480.5 1728.5 2992.8 1996.7 2108.7 2096.5 3460.2 3259.6 3119.9 True False 2687.1318724017137 2437.237373895877 2832.272198998963 2151.9825775953145 2552.5630845381856 2207.989468697809 2491.8234945450854 2393.685295261975 2676.4702248039684 2523.254096109482 2345.142725140451 1.1458287137900236 1.039270381187529 1.2077184764220854 0.9176339480431545 1.0884467956573143 0.9415160301450617 1.0625466279012292 1.020699196514198 1.1412824456744628 1.0759490537866363 1.0 11.195460012343641 -6.235906384256173 24.999349604531346 1.0490860645808142 1.1217722794566314 0.24665466159847493 0.07248229575701887 1172.6200840279507 1148110.8078039943 0.010675020038411486 0.028229003057912753 5.808896195568681e-07 6.235906384256173 0.07268621487581717 LLLAADPGGS(ph)PAQR ddPTM_A549_PD325901_60min_R1 2 LLLAADPGGSPAQR 14 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 LLLAADPGGS(1)PAQR;LLLAADPGGS(1)PAQR 213.99 2.0625999999999998e-38 32207000.0 9700.599999999999 10376.5 10676.099999999999 9924.6 11319.5 10103.099999999999 11490.5 11910.0 12712.099999999999 11820.900000000001 12077.0 True False 10685.397770795715 11250.96407132992 11400.644346604611 10537.620001598036 10524.457370155053 10020.823703272128 11927.777265342866 11672.445706785751 12177.854644518546 11074.526356632587 10591.605562410698 1.008855334333624 1.0622529327620795 1.0763849049538976 0.9949029860964371 0.9936602442509801 0.9461099777767161 1.1261538390056935 1.1020468651335473 1.1497647427258244 1.0455946731943797 1.0 13.37063368100002 -7.775500513761201 24.999983135456894 1.0791457754305813 1.016986360183618 0.33548556003168084 0.04936838629629693 320.3128575081139 569499.0849310831 0.010252357208276155 0.014202240220129074 1.6768703520452043e-08 7.775500513761201 -0.062159415246963334 LLLAAR ddPTM_A549_PD325901_60min_R1 1 LLLAAR 6 0 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 RPSA 40S ribosomal protein SA 0 122.91 0.043849 6420500.0 1078.5 1178.8 1356.3 1161.3 1379.9 1203.7 1541.4 1064.9 1338.8 1244.5 1402.8 False True 1187.9885260502624 1278.1416129989593 1448.346674094458 1233.0308634963421 1282.980584396568 1193.8974662854628 1600.058820486445 1043.6597341021104 1282.5348918024106 1165.922057612301 1230.2644930818676 0.9656366844127136 1.0389161194087275 1.1772644681196032 1.0022485981104312 1.0428493967038293 0.9704396680543841 1.30058115916052 0.8483214300428162 1.0424871229028185 0.9477003231163845 1.0 10.264752796841725 LLLAEDS(ph)EEEVDFLSER ddPTM_A549_PD325901_60min_R1 2 LLLAEDSEEEVDFLSER 17 0 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER 391.74 7.832399999999995e-303 190874000.0 61162.0 63865.0 68291.0 70501.0 79510.0 74194.0 75541.0 84071.0 72778.0 74621.0 74870.0 True False 67371.12121491521 69247.12768423691 72925.63792714327 74855.68665061191 73925.4918946091 73589.78866294227 78415.75409262147 82394.13795257654 69719.39375231235 69909.4173251004 65661.46464003382 1.0260374419646894 1.0546083317492267 1.1106306922474658 1.140024625721985 1.125858101092931 1.120745464122263 1.1942431458467857 1.25483247143928 1.0618007705817212 1.0646947598314247 1.0 16.00275931047385 -8.977779320680165 12.681108114608733 1.0272304826178376 1.1294911730437405 0.3006586394839247 0.05947889495245871 0.599296340589288 340.1235007827287 0.011329860595735621 0.011702859018212615 1.0524965461044626e-09 8.977779320680165 0.10226069042590291 LLLAS(ph)PPNER ddPTM_A549_MK2206_60min_R1 2 LLLASPPNER 10 0 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 LLLAS(1)PPNER;LLLAS(1)PPNER 129.82 1.2975e-06 14333400.0 3826.8999999999996 4250.3 3749.1000000000004 3869.2 5557.700000000001 4007.3 4018.8 4122.0 5554.0 6207.5 6819.3 True False 4472.787161277943 4466.622115500883 4280.778754794202 4817.1541736949885 4740.169692240673 4431.349826169544 4748.963939810206 4706.306123095569 4296.027867915508 4805.221438704018 5125.8796068945385 0.8725891952791561 0.8713864659429527 0.835130569402442 0.9397712281840759 0.9247524436322951 0.8645052490521197 0.9264680999184289 0.9181460518045285 0.8381054955206434 0.9374432891948493 1.0 12.32358387866888 -10.956620872319725 1.1798512553520246 1.0009534440738066 0.8849861170079134 0.36384911869133174 0.03834353043823889 0.28293918572955795 0.6906493863029719 0.026991304098755563 0.006062208993347075 1.1050428723719084e-11 10.956620872319725 -0.11596732706589319 LLLAS(ph)PPNER ddPTM_A549_PD325901_60min_R1 4 LLLASPPNER 10 0 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER 128.01 5.3397e-09 18586700.0 5188.2 5514.299999999999 5289.8 5458.9 5993.9 5356.700000000001 4927.6 5778.5 5545.200000000001 6436.9 7040.200000000001 True False 5714.9022446490235 5979.00941343753 5648.797638151485 5796.083854938585 5572.909141832447 5313.076811208225 5115.122514486182 5663.243284354444 5312.154527952445 6030.473035471771 6174.300031504824 0.9255951630935184 0.968370403597038 0.9148887500328906 0.9387434730031967 0.902597721749229 0.8605148412124219 0.8284538309421132 0.9172283911467414 0.8603654666677653 0.9767055382311898 1.0 12.592059875073334 -4.083082320091922 19.960415840145806 0.9203904934418549 0.9149946164562706 0.0 0.05060753474641705 0.0 0.0 0.00803370548662998 0.0 8.258813897345845e-05 4.083082320091922 -0.0053958769855843025 LLLATMESMNGGK ddPTM_A549_MK2206_60min_R1 5 LLLATMESMNGGK 13 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;;;; 125.48 1.5942e-06 9618300.0 5578.0 7334.000000000001 7122.299999999999 6922.4 9104.400000000001 7366.700000000001 7051.200000000001 7029.0 10668.7 8729.8 9386.8 False True 6519.430030993327 7707.269273953252 8132.34923722246 8618.388310758346 7765.154820525756 8146.2393043802995 8332.311767788824 8025.382275409696 8252.256484413067 6757.732116890582 7055.7984974994 0.9239818899737339 1.0923312615410907 1.1525767409747592 1.2214617968204071 1.1005352297514952 1.1545453441261617 1.1809169112102373 1.1374165912269065 1.169570883768534 0.9577558258339642 1.0 12.78459364504599 -10.844061127375232 1.0659236955343387 0.999256010056168 1.1329936366755837 0.3518430072459575 0.074639627855207 0.5178908898084787 1.035036363475837 0.05205244665648858 0.012458991924773921 1.4319863316046605e-11 10.844061127375232 0.13373762661941568 LLLATMESMNGGK ddPTM_A549_PD325901_60min_R1 5 LLLATMESMNGGK 13 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;;;; 143.96 1.2968e-12 35844600.0 24872.4 26133.800000000003 28712.700000000004 28199.699999999997 34121.1 30034.6 31107.399999999998 32059.0 30115.399999999998 30925.399999999998 32564.800000000003 False True 27397.42773790687 28336.187042579088 30661.316485491356 29941.531422834578 31724.551647404685 29790.00817553988 32291.209129622446 31419.55809520104 28849.754467124523 28972.76496623821 28559.536045275443 0.9593092721980399 0.9921795297254731 1.0735929476194557 1.048389979983157 1.110821674312627 1.0430844579657654 1.130662944889272 1.100142454884127 1.010161874527268 1.0144690348018146 1.0 14.801684922270205 -8.8947444762491 8.861548617762988 1.004472319804921 1.0590761865532672 0.1747689854349137 0.04730959220648352 0.31456267206060645 24.314096790408865 0.008538074839364033 0.009074641010674761 1.2742525863556089e-09 8.8947444762491 0.054603866748346164 LLLDIPLQT(ph)PHK ddPTM_A549_MK2206_60min_R1 1 LLLDIPLQTPHK 12 0 P49792;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 LLLDIPLQT(1)PHK 108.58 9.9859e-05 51958000.0 1622.7 1425.5 1501.0 1659.3 1961.1 1468.4 1645.3 1890.8 1981.8 2059.2 1845.5 True False 1896.5720887939883 1498.0518611972116 1713.8643703678474 2065.828574488807 1672.6247878534602 1623.7851133549673 1944.2297128918426 2158.8266903321446 1532.9254642842918 1594.0252898234892 1387.2114167911486 1.367183160286466 1.079901623548093 1.2354745279795214 1.4891951936694792 1.2057461231991013 1.170539035146534 1.4015381428947364 1.5562348061738642 1.105040980581175 1.1490860517214712 1.0 10.437971961806355 -8.96846038171371 16.845284443784703 1.0463334373578645 1.3050384986634105 0.352663912812359 0.13696952434071233 3.6793419629674764 1965.163435499883 0.023950040145152743 0.025183989261323238 1.0753246918494091e-09 8.96846038171371 0.25870506130554594 LLLDIPLQT(ph)PHK ddPTM_A549_PD325901_60min_R1 1 LLLDIPLQTPHK 12 0 P49792;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 LLLDIPLQT(1)PHK 113.53 2.9058000000000002e-05 27965000.0 2121.2 2282.5 2411.8 2277.7 3251.6 2509.1 2538.0 2293.0 2491.9 2748.0 2647.9 True False 2336.5426624550933 2474.8542854344455 2575.4792513315724 2418.3883559679803 3023.21883341103 2488.6667214894546 2634.5849788468895 2247.2643161762985 2387.1741088156773 2574.4908110233855 2322.2250864210705 1.0061654557595399 1.065725411333232 1.109056682916473 1.0414099693045316 1.3018629637105101 1.0716733429681866 1.13450887868377 0.9677202822917141 1.027968444047215 1.1086310392896055 1.0 11.181292099813598 -8.256030043553393 24.904478721465093 1.0101648208769374 1.1069590964742377 0.1759107487502043 0.07866481644527404 412.39840209426995 1898673.74467516 0.011372639703775335 0.014471262019758159 5.54587346477158e-09 8.256030043553393 0.09679427559730036 LLLDPS(ph)SPPTK ddPTM_A549_MK2206_60min_R1 1 LLLDPSSPPTK 11 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LLLDPS(0.593)S(0.407)PPTK 133.07 6.9294e-08 5263700.0 4406.2 5432.0 5294.6 5483.3 7254.4 5918.6 5436.5 5584.2 7965.1 7188.3 7087.1 True False 5149.858838752745 5708.465598052094 6045.4538943035295 6826.708746154691 6187.287369845567 6544.902323551286 6424.241678804172 6375.777450895265 6161.017567651028 5564.458037508829 5327.177475990539 0.9667143364310716 1.0715741354178663 1.134832455188558 1.2814870120101127 1.1614569624780706 1.2285872496362291 1.2059372355732607 1.1968396922442965 1.1565256827688932 1.0445415161382754 1.0 12.379155630037648 -10.456811854078593 0.8458860383894027 1.002354512125383 1.160759044307082 0.2859344379461374 0.08011178991882925 0.5434943456591654 0.7156204719758404 0.05116648932521763 0.01583747811318607 3.492916035105078e-11 10.456811854078593 0.15840453218169914 LLLDPS(ph)SPPTK ddPTM_A549_PD325901_60min_R1 1 LLLDPSSPPTK 11 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LLLDPS(0.952)S(0.048)PPTK 144.1 2.4953000000000002e-11 9207800.0 4446.6 4599.4 5013.4 3827.5 5799.4 5163.2 5025.6 5465.8 4808.2 5353.2 5617.3 True False 4898.015558586089 4987.007579595705 5353.639472023267 4063.9159821168055 5392.070150843869 5121.152611053507 5216.851958113839 5356.780331162852 4606.128074965903 5015.198038417169 4926.407710998559 0.9942367432664815 1.0123010258492922 1.0867227777495725 0.824924817538715 1.094523731522603 1.0395308126081741 1.058956599647009 1.0873603334136261 0.9349871844107402 1.018023341271649 1.0 12.266320315319739 -8.782334070228227 24.992881232000887 0.969299508510027 1.0237543646219869 0.04626717376742173 0.07356918727582461 401.51273969443866 480261.831410541 0.012327447498762517 0.013130334757721062 1.650691556317731e-09 8.782334070228227 0.05445485611195988 LLLDPSS(ph)PPTK ddPTM_A549_MK2206_60min_R1 1 LLLDPSSPPTK 11 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LLLDPS(0.288)S(0.71)PPT(0.002)K 95.618 0.00028425 4284900.0 2210.6 2613.7 2577.6 2658.2 3364.3 2604.1 2739.2 2622.5 4018.9 3311.2 4424.7 True False 2583.695236018977 2746.726165984674 2943.142439080721 3309.459119331133 2869.4159266612605 2879.664133538321 3236.8771832208927 2994.2474060694162 3108.625566864537 2563.197620271724 3325.9248744924357 0.7768351161008322 0.8258533399386683 0.8849094763542635 0.9950492702683744 0.8627422551446409 0.8658235655361224 0.9732261868106289 0.9002751171661277 0.9346649982101414 0.7706721339167019 1.0 11.699539866269449 -2.0000000000000004 0.15965682614831048 1.0017318864215217 0.25707904253249286 0.0 0.0786052242754027 31.149044484579296 0.3039012717205311 0.06942957772578176 5.50385366970513 0.00999999999999999 2.0000000000000004 -0.7446528438890287 LLLDPSS(ph)PPTK ddPTM_A549_PD325901_60min_R1 1 LLLDPSSPPTK 11 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LLLDPS(0.389)S(0.607)PPT(0.003)K 100.09 0.0002715 8364500.0 5314.5 5801.8 5896.0 5280.8 6313.1 6426.7 5793.0 6402.0 6237.1 5689.8 7071.5 True False 5854.024127671879 6290.738047418872 6296.138015528221 5606.983022433031 5869.689635012662 6374.363085965596 6013.455785051236 6274.307087728158 5974.976377099504 5330.545056972656 6201.7503299318705 0.9439309575908369 1.014348806829181 1.0152195236142936 0.9040968636502054 0.9464569392101186 1.0278329095579088 0.9696384835145881 1.0116993999977881 0.9634338790231729 0.8595226788227083 1.0 12.598459731763949 LLLERPS(ph)PIR ddPTM_A549_MK2206_60min_R1 6 LLLERPSPIR 10 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR 85.973 0.00022198 253238300.0 7047.339999999999 7132.69 7328.2699999999995 6436.07 9480.63 6883.4400000000005 6677.53 7077.69 10786.300000000001 9013.099999999999 9825.5 True False 8236.758701079332 7495.713454817782 8367.528880370142 8012.907438926161 8086.041885914619 7611.841051942323 7890.750765651656 8080.974232016564 8343.220272181678 6977.034450130188 7385.557179995356 1.1152521739848626 1.0149150933555557 1.1329583776068475 1.0849428477285448 1.0948452078628013 1.0306387001592627 1.0684029076404251 1.0941590505730328 1.1296670066789631 0.9446862680893325 1.0 12.850491049320913 -10.996493732236129 1.280501874404561 1.0001121354193772 1.0877584514046073 0.5201869892042708 0.03955175007911639 0.3339412729249008 0.976586387921286 0.02528998202835425 0.005806502102019031 1.0081061583075265e-11 10.996493732236129 0.0876463159852301 LLLERPS(ph)PIR ddPTM_A549_PD325901_60min_R1 4 LLLERPSPIR 10 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR 82.54299999999999 0.00028989 437842900.0 6496.28 6121.29 5805.83 5920.57 6984.45 7019.040000000001 6946.2 6648.66 7328.33 6782.8 6967.8 True False 7155.777563291428 6637.152590969127 6199.8485370919625 6286.270162309938 6493.886327044432 6961.879265395297 7210.541442106484 6516.0472605271325 7020.345775054047 6354.532850440108 6110.804772523413 1.1710041196973964 1.0861339607529898 1.014571528281991 1.0287139577057816 1.0626892150512655 1.1392737167285478 1.1799659309241757 1.0663157314116547 1.1488414433758856 1.0398847757356924 1.0 12.577146675323537 -5.2734701658882726 5.023181110657927 1.0764344122682277 1.1748575707324393 0.19595414530642274 0.05519134672948514 0.23968875855983615 18.544783972507624 0.009177654360040335 0.07975088720650883 5.3275782117394524e-06 5.2734701658882726 0.09842315846421168 LLLERPS(ph)PIRDR ddPTM_A549_MK2206_60min_R1 5 LLLERPSPIRDR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR 122.33 2.2304e-06 719946300.0 4274.43 4289.67 4262.0 4101.99 5075.4800000000005 3937.36 3971.38 4356.5199999999995 6440.21 6270.73 5830.959999999999 True False 4995.849284219939 4507.9958803380205 4866.415687213698 5106.977734145329 4328.883615447703 4354.008821791962 4692.928339624632 4974.070051282952 4981.5127179020765 4854.167737788872 4382.971705690876 1.1398315160769348 1.0285249787227266 1.1103005024867296 1.1651861059277202 0.9876594936323809 0.9933919528019521 1.0707183743694504 1.134862459829387 1.1365605466797908 1.1075060629495264 1.0 12.097693650225267 -11.036515302763151 1.362675462148635 1.0004742488172484 1.0883743488918363 0.0 0.0655102188039289 0.535313763874917 1.7871956553095396 0.0424332240158519 0.009741532545154797 9.193580798107275e-12 11.036515302763151 0.08790010007458782 LLLERPS(ph)PIRDR ddPTM_A549_PD325901_60min_R1 4 LLLERPSPIRDR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR 123.72 1.5874e-06 1265950000.0 6593.299999999999 7046.3 7854.599999999999 7323.8 8492.5 7391.0 7553.2 8477.9 8311.4 8474.6 8710.9 True False 7262.646962269074 7640.1164299919965 8387.660389546803 7776.174492443385 7896.0160975345025 7330.810146478243 7840.641159269634 8308.80163371611 7962.100761672064 7939.512309715716 7639.514522944713 0.9506686505348285 1.0000787886514877 1.0979310745931683 1.0178885672758686 1.033575638061739 0.9595911002539103 1.0263271488941939 1.0876085919807132 1.0422260128910663 1.03926922134515 1.0 12.899265245227552 LLLERPS(ph)PIRDRR ddPTM_A549_MK2206_60min_R1 2 LLLERPSPIRDRR 13 3 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIRDRR;LLLERPS(1)PIRDRR 54.7 0.005691300000000001 12226400.0 807.94 1101.79 736.39 880.28 1344.35 663.47 694.89 600.63 1475.6100000000001 1230.1399999999999 1353.3200000000002 True False 944.3005197634906 1157.8664048744129 840.8211750134437 1095.9486395172707 1146.5978958496758 733.677955024258 821.1425181981479 685.7711418522305 1141.3866910649622 952.2505196306653 1017.2532942681094 0.9282845532025467 1.1382282184767674 0.8265602871489303 1.0773606197124983 1.1271508308799598 0.7212342876236372 0.8072153934767459 0.6741400059516418 1.1220280116037018 0.9360997157701887 1.0 9.990463237097863 LLLERPS(ph)PIRDRR ddPTM_A549_PD325901_60min_R1 3 LLLERPSPIRDRR 13 3 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIRDRR;LLLERPS(1)PIRDRR;LLLERPS(1)PIRDRR 55.885 0.0036341999999999998 21410700.0 647.4200000000001 1088.63 1186.1100000000001 1489.3700000000001 972.36 1783.42 1538.44 1482.98 1566.6 1587.92 1640.47 True False 713.1456017945867 1180.372670647318 1266.6065572588486 1581.3650022953116 904.0647880598941 1768.8964188110158 1596.9861760666709 1453.4008005246951 1500.7612499982495 1487.6584602038765 1438.7025897961312 0.49568660462037656 0.8204424451717854 0.8803810921326908 1.099160461314938 0.6283889349139234 1.2295080521552924 1.1100182813273236 1.0102162954545364 1.0431351556897608 1.0340277905628033 1.0 10.49055267203403 -4.959874183842961 0.8324765249781104 1.0243490338299044 4.250738300169741e-15 0.5490931504795163 0.14003914119725275 1.9201777663046813 0.6907497616162082 0.019944844272536715 2.028798405271307 1.096795894533321e-05 4.959874183842961 -1.0243490338299002 LLLIGDSGVGK ddPTM_A549_MK2206_60min_R1 2 LLLIGDSGVGK 11 0 P62820;E7END7;P62820-3;P62820-2;Q92928;A0A2R8YDI9;G3V196;A0A2R8YFB8;P59190-2;P59190;Q9H0U4;E9PLD0;P61006;H0YMN7;H0YNE9;Q92930;H0YLJ8;H0YL94;P51153;P61006-2;P61026 P62820;Q9H0U4;P61006;P51153;P61006-2;P61026 RAB1A;RAB1C;RAB15;RAB1B;RAB8A;RAB8B;RAB13;RAB10 Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C;Ras-related protein Rab-15;Ras-related protein Rab-1B;Ras-related protein Rab-8A;Ras-related protein Rab-8B;Ras-related protein Rab-13;Ras-related protein Rab-10 0 ; 150.35 2.6216999999999998e-11 9314100.0 5888.0 5835.2 5845.7 5420.0 7319.1 5484.9 5860.9 6192.700000000001 8805.099999999999 7864.9 7483.099999999999 False True 6881.750452220992 6132.186755845647 6674.708161132123 6747.900243313047 6242.4700855531455 6065.308477418044 6925.749665281587 7070.534189348358 6810.758908855391 6088.213627589723 5624.839746946537 1.2234571582162448 1.0901975934824677 1.1866485911452873 1.1996608875792714 1.109804077341384 1.0783077830280616 1.2312794633911577 1.2570196676601535 1.2108360798283426 1.0823799257382807 1.0 12.4575962788444 -10.765614422060503 1.0271075316853429 1.000490450029747 1.1752089605560339 0.40273325989378705 0.06091303729655095 0.32294791545365065 0.6077805177761623 0.04041304333071893 0.010385660753365458 1.7154796790963352e-11 10.765614422060503 0.17471851052628695 LLLIGDSGVGK ddPTM_A549_PD325901_60min_R1 1 LLLIGDSGVGK 11 0 P62820;E7END7;P62820-3;P62820-2;Q92928;A0A2R8YDI9;G3V196;A0A2R8YFB8;P59190-2;P59190;Q9H0U4;E9PLD0;P61006;H0YMN7;H0YNE9;Q92930;H0YLJ8;H0YL94;P51153;P61006-2;P61026 P62820;Q9H0U4;P61006;P51153;P61006-2;P61026 RAB1A;RAB1C;RAB15;RAB1B;RAB8A;RAB8B;RAB13;RAB10 Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C;Ras-related protein Rab-15;Ras-related protein Rab-1B;Ras-related protein Rab-8A;Ras-related protein Rab-8B;Ras-related protein Rab-13;Ras-related protein Rab-10 0 155.42 1.0374e-12 6859700.0 5799.3 5004.2 4886.3 5627.9 7096.4 6023.6 6019.8 6317.8 6993.7 6522.9 6253.8 False True 6388.040666780982 5425.921496241426 5217.913701708876 5975.522601111739 6597.973345250965 5974.545798718217 6248.886783160954 6191.786522781782 6699.779110246877 6111.042980794924 5484.622246104497 1.164718440056313 0.9892972118718361 0.9513715744808035 1.0895048615893115 1.2029950376139826 1.0893267631989956 1.1393467959619794 1.1289358218206467 1.2215570753310232 1.1142140163135843 1.0 12.421176542949773 -6.508732864193382 24.240183862483285 1.1170361082732287 1.0288612649505193 0.2250886898147656 0.07351765475210548 654.8905912088483 1122208.9868853255 0.013167196202395674 0.029527643092948242 3.0993251169679093e-07 6.508732864193382 -0.08817484332270942 LLLPGELAK ddPTM_A549_MK2206_60min_R1 8 LLLPGELAK 9 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q96A08;Q16778;P33778;P23527;P06899;Q8N257;A0A2R8Y619 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ;;;;;;; 124.98 0.00022195 181605210.0 4959.88 5226.6939999999995 5363.73 4149.46 6500.7 6104.48 5216.58 5367.389999999999 6835.81 6418.51 6264.205 False True 5796.986486576402 5492.71039958492 6124.387567803554 5166.0778862763345 5544.4556414252165 6750.452021774125 6164.365061494762 6128.233969442486 5287.509949545462 4968.564133151203 4708.63001523717 1.2311407920812 1.1665198543547612 1.3006729235435743 1.0971509482713357 1.1775093017466456 1.433633986940915 1.3091631836748312 1.3014898069314143 1.1229402039308742 1.0552037677780766 1.0 12.20109165071577 -9.179457666289611 1.5740498104827498 1.038201513364166 1.250022308709305 0.48630396365864825 0.08831456861503816 0.20782465124119934 1.062918654986 0.020177808960981147 0.018473025775079244 6.615190172110726e-10 9.179457666289611 0.21182079534513898 LLLPGELAK ddPTM_A549_PD325901_60min_R1 2 LLLPGELAK 9 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q96A08;Q16778;P33778;P23527;P06899;Q8N257;A0A2R8Y619 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ; 138.54 0.00011851 479560000.0 10331.6 10983.9 10422.3 10636.2 12010.6 10458.4 10773.5 11562.6 11071.5 10164.3 10664.0 False True 11380.456426278071 11909.551801000407 11129.619952381232 11293.173917437178 11167.016890320625 10373.230257871473 11183.491437985407 11331.97487231577 10606.203357178367 9522.524363349707 9352.395604665695 1.216849340782871 1.2734225865145188 1.190028782232963 1.207516704255247 1.1940274302286418 1.1091522104450444 1.195788962606139 1.211665476026539 1.1340627370261342 1.0181909283862136 1.0 13.191120241565248 -13.766439149692967 0.13105672619136524 0.5021868240115103 1.2853855938659389 0.8162370230911826 0.034999087339558324 14.237894620863141 0.17426818338811123 1.9778571608580973 0.11310731942601662 1.712225064904169e-14 13.766439149692967 0.7831987698544286 LLLQVQHAS(ph)K ddPTM_A549_PD325901_60min_R1 1 LLLQVQHASK 10 0 P05141;P12236;P12235;V9GYG0 P05141;P12236 SLC25A5;SLC25A6;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 1 LLLQVQHAS(1)K 62.924 0.0020881 1766400.0 940.26 1000.7 661.74 946.96 1225.3 954.42 799.3 884.41 1056.4 1049.1 1310.2 True False 1035.714503017173 1085.032500956956 706.6496557658827 1005.4515684978 1139.2391550555224 946.6475199569428 829.7177988937431 866.7697487437772 1012.0031817299571 982.859646959474 1149.053706042104 0.901363006420887 0.9442835397958308 0.6149840099292881 0.8750257391893899 0.9914585794075824 0.8238496729779969 0.7220879185462026 0.7543335391427011 0.8807274859377852 0.8553644114206962 1.0 10.16623051487402 -9.829739466592322 0.9713447962136893 0.9828975196916079 0.8310764007446232 0.0601857178508034 0.10820949119738763 0.47641022570170005 0.9235764099293482 0.03509344921031321 0.020506945697018802 1.4799959719985723e-10 9.829739466592322 -0.1518211189469847 LLNKPGLK ddPTM_A549_MK2206_60min_R1 2 LLNKPGLK 8 1 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 94.302 0.01567 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LLNKPGLK ddPTM_A549_PD325901_60min_R1 2 LLNKPGLK 8 1 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 84.476 0.02592 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LLNNS(ph)DER ddPTM_A549_MK2206_60min_R1 2 LLNNSDER 8 0 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 LLNNS(1)DER;LLNNS(1)DER 83.883 0.0032673000000000003 10090100.0 1865.41 1917.6999999999998 1671.74 1584.3 2173.66 1653.31 1714.77 1395.5900000000001 2386.8 2469.4 2656.3 True False 2180.245603104207 2015.3027388410337 1908.8178697659846 1972.4535711219296 1853.9174934299915 1828.2621668216423 2026.321512657597 1593.419156315125 1846.1936109363946 1911.5608249272154 1996.6673998495394 1.0919423050972341 1.0093332214433404 0.9560019209558013 0.9878728782122479 0.9285059161929999 0.9156568424763246 1.0148518039660948 0.7980393511884847 0.9246375290524181 0.9573756876439525 1.0 10.96337831671748 -5.052680255915724 1.1551042121255752 0.950114633885268 1.2172380939981624 0.39780856334285897 0.055189362033076166 2.0578681996095183 1.630111094234045 0.00850747794894529 0.7409038699131014 8.857675054892951e-06 5.052680255915724 0.26712346011289445 LLNS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 LLNSPAK 7 0 Q9UBZ9-2;Q9UBZ9 Q9UBZ9-2 REV1 DNA repair protein REV1 1 LLNS(1)PAK;LLNS(1)PAK 72.325 0.019847 17194600.0 6251.9 6570.700000000001 6745.0 6099.9 8973.8 6279.6 6180.4 7199.0 9655.4 9406.2 9339.2 True False 7307.067875720186 6905.120564271147 7701.542423804881 7594.375773834918 7653.765907520979 6944.103103938878 7303.2986796066 8219.480296012856 7468.467316505472 7281.332887110383 7020.0188911925725 1.0408900586988092 0.9836327610078687 1.0970828630486107 1.0818169995757336 1.0902771098128405 0.989185814393044 1.0403531376203894 1.170862988178728 1.0638813701592071 1.037224115770637 1.0 12.777259197555622 -10.510269585781172 1.0618244190272834 1.0033455548759538 1.0615560426697923 0.08557096079104587 0.05027768773061284 0.665362719975955 1.4392782622230915 0.024984740519051158 0.008932155287845673 3.0883777448027907e-11 10.510269585781172 0.05821048779383853 LLNS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 LLNSPAK 7 0 Q9UBZ9-2;Q9UBZ9 Q9UBZ9-2 REV1 DNA repair protein REV1 1 LLNS(1)PAK;LLNS(1)PAK 68.893 0.022427000000000002 30287000.0 8695.5 8396.7 7833.0 8446.3 10990.8 9156.1 9589.599999999999 9984.2 9612.900000000001 9838.599999999999 11080.5 True False 9578.260758711232 9104.319377221216 8364.594483655454 8968.008768060921 10218.844124201609 9081.53575729528 9954.537475630466 9785.057298546619 9208.903242760234 9217.389116934017 9717.668745076728 0.9856541738535671 0.9368830751545989 0.8607614339491884 0.922855985660593 1.051573622467713 0.9345385190142715 1.0243750571014003 1.0069346419637974 0.9476453133294701 0.9485185550910893 1.0 13.246394539510753 -6.608346958150835 24.999998527722653 0.9824106295434673 0.922517391739603 0.3150625213957723 0.04275811283359749 21.62763947627663 6322.741841888928 0.0059548054287896016 0.012395918622759175 2.4640700035211765e-07 6.608346958150835 -0.05989323780386424 LLNSTNREDEDT(ph)PPNSPNVDLGK ddPTM_A549_PD325901_60min_R1 1 LLNSTNREDEDTPPNSPNVDLGK 23 1 P98174 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 1 LLNS(0.01)T(0.008)NREDEDT(0.972)PPNS(0.01)PNVDLGK 82.15700000000001 1.7743e-05 12140000.0 3448.4 4244.4 3788.7 3885.9 4723.7 4657.6 3589.7 3606.0 5089.9 4275.6 4762.5 True False 3798.4790294220916 4602.0904837230955 4045.8239653038945 4125.923217480782 4391.92360788033 4619.670049822358 3726.30799785921 3534.0755011477268 4875.989203604039 4005.6378863215396 4176.742691974904 0.9094357276832974 1.1018372026041836 0.9686553047851011 0.9878327495270979 1.0515188345978002 1.106046120269387 0.8921564656158617 0.8461319649730918 1.1674143137839568 0.9590339127229165 1.0 12.028162553744322 -8.786775190990342 24.99963936795163 1.0790567312564023 0.9899628874803523 0.03210868304097181 0.09314675837202174 315.58157497860117 311392.84979509225 0.016810739656976794 0.017899682728227225 1.6338975027940802e-09 8.786775190990342 -0.08909384377605001 LLPAAS(ph)SDAESGTGSSDREPPR ddPTM_A549_MK2206_60min_R1 2 LLPAASSDAESGTGSSDREPPR 22 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 LLPAAS(0.565)S(0.435)DAESGTGSSDREPPR;LLPAAS(0.542)S(0.458)DAESGTGSSDREPPR 163.15 1.5415999999999997e-33 38234000.0 9343.9 10485.400000000001 9228.8 8744.4 13149.1 10653.8 9108.8 10498.3 14641.0 14209.900000000001 14875.3 True False 10920.921883578085 11019.062073235536 10537.582612425573 10886.77839255103 11214.884808507448 11781.178044579912 10763.75105378302 11986.46617469535 11324.836876872696 10999.873720795844 11181.352472605457 0.9767084894546136 0.9854856199402053 0.9424246877328004 0.973654879338064 1.0029989516906963 1.053645171587609 0.9626519761499722 1.072005037321061 1.012832473049998 0.983769516947593 1.0 13.448807083607944 -6.781612057717264 4.322796148916657 1.0116158098666956 0.9682834353891688 0.32766539874554323 0.02982409777638501 0.17480464625385347 7.51809971270388 0.0038958549722820915 0.007863683737830592 1.6534381056105477e-07 6.781612057717264 -0.0433323744775268 LLPAASS(ph)DAESGTGSSDREPPR ddPTM_A549_PD325901_60min_R1 2 LLPAASSDAESGTGSSDREPPR 22 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 LLPAAS(0.041)S(0.959)DAESGTGSSDREPPR;LLPAAS(0.049)S(0.951)DAESGTGSSDREPPR 239.87 1.7106999999999996e-98 62702000.0 11674.599999999999 10928.0 9501.900000000001 10533.6 13100.7 10718.4 11526.8 11969.9 11905.0 11745.0 13199.6 True False 12859.796797613715 11848.94091181933 10146.756073566421 11184.236548458683 12180.552026961466 10631.112904074193 11965.458681706978 11731.15095429511 11404.674250752687 11003.418695585757 11576.132879158422 1.110888837563915 1.0235664220088618 0.8765238080356317 0.9661461789709319 1.0522125267662774 0.9183647954848864 1.0336317668959636 1.0133911796586044 0.985188609167192 0.9505262949595391 1.0 13.498865766915504 LLPAPR ddPTM_A549_PD325901_60min_R1 1 LLPAPR 6 0 Q86UK7-2;Q86UK7-3;H3BQQ2;H3BPG6;Q86UK7 Q86UK7-2 ZNF598 Zinc finger protein 598 0 130.51 0.033895999999999996 7672700.0 1546.6 1501.7 1950.8 1908.5 2171.9 2081.2 1880.3 1975.4 1991.7 2341.5 2531.5 False True 1703.609693453257 1628.253529216609 2083.193019113372 2026.383710482019 2019.3532366482402 2064.2513972196616 1951.8558454396405 1935.9990973286797 1907.9957753233205 2193.6572903971096 2220.141548500675 0.7673428275795088 0.7334007736201392 0.9383154062947976 0.9127272591472799 0.9095605809512313 0.9297836881678601 0.8791582891450251 0.8720160652081463 0.859402760428426 0.9880709146128763 1.0 11.116435945386085 -14.999999999998911 0.018550040121448896 2.0792243182172996 2.6737439090031454e-13 0.4913303844089938 0.05586080968520286 2072.3140343620616 2.9872778397656967 219.32817097218162 127.25591437071269 1.0000000000025073e-15 14.999999999998911 -2.0792243182170322 LLPDDPYEK ddPTM_A549_MK2206_60min_R1 1 LLPDDPYEK 9 0 Q5TA01;Q5TA02;P78417-2;P78417-3;P78417 Q5TA01 GSTO1 Glutathione S-transferase omega-1 0 84.476 0.00374 844750.0 1129.0 1360.3 1052.0 900.31 1697.7 1190.0 1117.6 1209.0 1784.1 1573.7 1889.9 False True 1319.5475986001197 1429.533459688928 1201.1894188054457 1120.8859904164515 1447.9705789295913 1315.925010141931 1320.6534535512806 1380.3794524072164 1380.0041986222645 1218.2000770178831 1420.5856714134866 0.9288757624080259 1.006298661499618 0.8455592949985614 0.7890308997000982 1.0192771953618656 0.9263256955369555 0.929654212432839 0.9716974345051187 0.9714332802253007 0.857533692991406 1.0 10.472270123578769 -8.26583157432461 0.6682739059855667 0.9921407004990942 0.9107838665800484 0.0 0.07264036991567784 0.7450318806715163 0.6869797979663207 0.01516196548795926 0.020844597513934054 5.4221112694227546e-09 8.26583157432461 -0.0813568339190458 LLPDDPYEK ddPTM_A549_PD325901_60min_R1 2 LLPDDPYEK 9 0 Q5TA01;Q5TA02;P78417-2;P78417-3;P78417 Q5TA01 GSTO1 Glutathione S-transferase omega-1 0 ; 84.476 0.00374 3450400.0 4193.5 4208.4 4421.9 4232.6 5239.9 4357.0 4128.8 4659.1 4920.5 4697.5 4991.799999999999 False True 4619.221032908464 4563.056637381083 4721.996725044817 4494.038089067957 4871.867500673658 4321.518036558746 4285.923743366053 4566.170595506757 4713.708496499672 4400.899048319636 4377.840245627367 1.0551369565214697 1.0423077091355064 1.0786133024751638 1.0265422758531788 1.1128472551139184 0.9871347043499642 0.979004144257406 1.043019009217501 1.076720079314857 1.0052671640348914 1.0 12.096003593898548 -7.272349057689574 24.992806489139102 1.0298012132969752 1.0607669900192975 0.2781973723071173 0.034167389333022616 1229.8002162109433 2817327.867530155 0.005937486813637851 0.00954787404705059 5.341348839095076e-08 7.272349057689574 0.03096577672232237 LLPDPGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LLPDPGSPR 9 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 LLPDPGS(1)PR;LLPDPGS(1)PR 73.067 0.0023656 35494000.0 1126.64 1298.44 1655.4499999999998 1154.39 1626.88 1467.2 1211.43 1362.37 2386.2 2047.23 1818.0500000000002 True False 1316.7892882965803 1364.5250499143515 1890.2177028150902 1437.2156018225367 1387.5681071149054 1622.4581301514627 1431.5311499960883 1555.490119583142 1845.7295099783908 1584.7593211370147 1366.5780093726069 0.9635668650201064 0.9984977370891561 1.3831758522756306 1.0516893964087417 1.0153596044999547 1.1872415032467336 1.0475297715739633 1.1382373409456985 1.3506214042078442 1.1596552192908287 1.0 10.416352101290666 -8.518884340852054 24.829646427876426 1.1697216374740915 1.0986754723201742 0.06320596840789294 0.13158851942972385 464.82726673474406 2889418.5433057607 0.02711211780260794 0.03110437657675064 3.027719647990974e-09 8.518884340852054 -0.07104616515391737 LLPDPGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LLPDPGSPR 9 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 LLPDPGS(1)PR;LLPDPGS(1)PR 123.96 9.3543e-05 58180000.0 5401.6 5334.4 5630.0 5301.0 5767.8 5242.0 4701.0 5873.3 5427.2 5168.0 5255.299999999999 True False 5949.966455552247 5783.948609078427 6012.085655940275 5628.4307305555 5362.6896258297875 5199.310889979559 4879.8991274859045 5756.152423985282 5199.113657596389 4841.6915980236 4608.931416091488 1.2909644163457734 1.2549435187697777 1.3044424212844337 1.2212007995832965 1.1635429434047662 1.1280946537470349 1.0587918731982793 1.2489125795815534 1.1280518602304117 1.050501984281966 1.0 12.170216584252275 -2.000000000055965 0.05420916061913179 0.6713166068950387 2.186036671566457 0.7039324947752397 0.053874532708191786 120.55662282158937 0.4777683470480872 2.9109535107051987 14.771288280245525 0.009999999998711357 2.000000000055965 1.5147200646714185 LLPLEEHYR ddPTM_A549_MK2206_60min_R1 2 LLPLEEHYR 9 0 Q9NZN4;C9JIJ3;C9IZH1;C9JC03;Q9NZN3-2;A0A024R571;Q9H4M9;Q9NZN3 Q9NZN4;A0A024R571;Q9NZN3 EHD2;EHD1;EHD3 EH domain-containing protein 2;EH domain-containing protein 3;EH domain-containing protein 1 0 ; 112.84 0.00028188 2786800.0 0.0 96.306 116.26 0.0 116.89 285.199 0.0 168.15 117.02 92.353 305.14 False True 0.0 101.20756404381531 132.74741618851823 0.0 99.6956358432467 315.37856888022566 0.0 191.9857774377778 90.51515684254102 71.49039315805587 229.36531656442756 0.0 0.4412505149416809 0.5787597627090675 0.0 0.4346587240675628 1.3750054873341646 0.0 0.8370305515823269 0.39463314767172203 0.31168789697100774 1.0 7.841503440746921 -14.999999999999998 0.16016030488177288 3.0136562091092056 0.2887113304805123 0.0 0.4236069065047691 62.64834951370409 0.6469088574097812 40.22103902215755 0.5753052119021107 1.000000000000004e-15 14.999999999999998 -2.724944878628693 LLPLEEHYR ddPTM_A549_PD325901_60min_R1 2 LLPLEEHYR 9 0 Q9NZN4;C9JIJ3;C9IZH1;C9JC03;Q9NZN3-2;A0A024R571;Q9H4M9;Q9NZN3 Q9NZN4;A0A024R571;Q9NZN3 EHD2;EHD1;EHD3 EH domain-containing protein 2;EH domain-containing protein 3;EH domain-containing protein 1 0 ; 128.12 5.529e-05 5022100.0 311.97 487.92999999999995 346.24 221.99 337.69 336.08000000000004 379.14 282.868 323.58 348.91999999999996 252.17 False True 343.6409647398243 529.0495734904838 369.73792851025956 235.7018181241306 313.9718193672564 333.34307590696886 393.56838017336855 277.22597583434674 309.981057879761 326.88913165294014 221.1546886373357 1.5538488777117894 2.392215045271117 1.6718520904459802 1.0657780740549898 1.4196932531786763 1.50728468820124 1.7796067657365762 1.2535387675590297 1.4016481395431264 1.4781017470942923 1.0 7.788912018500681 -2.0000000000098455 0.05797185358422269 0.1929095310911893 4.260712764350219 0.19661257564526124 0.32233017132649916 209.87994523506072 0.8859218532344565 12.80469415804823 72.44811066711951 0.0099999999997733 2.0000000000098455 4.06780323325903 LLPPAS(ph)P ddPTM_A549_PD325901_60min_R1 3 LLPPASP 7 0 Q9Y4R8 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog 1 LLPPAS(1)P;LLPPAS(1)P;LLPPAS(1)P 90.777 0.01124 4539500.0 101.38 0.0 253.64 283.44 273.55899999999997 383.31 113.53 0.0 192.31 229.47000000000003 307.47 True False 111.67202296798858 0.0 270.85353566122416 300.9474450610547 254.34515956731693 380.1884504460256 117.85044627599974 0.0 184.22787947603948 214.98122503840483 269.65313921291823 0.41413210798859756 0.0 1.00445163164727 1.116053927424989 0.943230849489521 1.4099166490542083 0.43704459224910036 0.0 0.6832031698713994 0.7972509634633089 1.0 8.074961019100844 -5.7633799343060215 24.997928145762312 0.8322666110500414 0.20706598740595142 0.29931771950243313 0.3621121645467346 44.67969923997843 575597.7952458715 0.052423483886565723 0.1759273295830783 1.724328735606305e-06 5.7633799343060215 -0.62520062364409 LLPPVGTGRS(ph)PR ddPTM_A549_MK2206_60min_R1 4 LLPPVGTGRSPR 12 1 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2;Q9NWZ5-4 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 LLPPVGT(0.019)GRS(0.981)PR;LLPPVGT(0.001)GRS(0.999)PR;LLPPVGT(0.049)GRS(0.951)PR;LLPPVGT(0.187)GRS(0.813)PR 165.89 3.8204e-15 96172600.0 9207.6 9824.1 9922.7 9144.0 14007.400000000001 9938.300000000001 9761.9 10420.0 15483.400000000001 15243.8 15750.9 True False 10761.617775793142 10324.104727876205 11329.888066521671 11384.280410489753 11946.930015490581 10989.964309490384 11535.510869919695 11897.066909911662 11976.434621909066 11800.214992721112 11839.516827274832 0.9089575134520251 0.8720038898962874 0.956955273750773 0.9615494092008599 1.0090724300478462 0.9282443253235365 0.9743227733200399 1.0048608472352731 1.011564474854144 0.9966804528320632 1.0 13.531322585084041 -5.153023912049681 0.3870151029546744 1.0061846231356424 0.7830454886221755 0.6378048057042436 0.0264355716068363 2.4512799491615724 0.23065718820377135 0.006598703861258242 0.2573605817713197 7.030336101186305e-06 5.153023912049681 -0.2231391345134669 LLPPVGTGRS(ph)PR ddPTM_A549_PD325901_60min_R1 3 LLPPVGTGRSPR 12 1 Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2;Q9NWZ5-4 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 LLPPVGTGRS(1)PR;LLPPVGTGRS(1)PR;LLPPVGT(0.152)GRS(0.848)PR 175.27 1.7543e-16 193235800.0 11956.400000000001 12519.3 12751.5 12798.1 15487.6 14889.3 12368.8 14808.4 15728.9 14851.3 15525.8 True False 13170.204926163535 13574.345347487168 13616.89347099865 13588.60957040603 14399.804405319439 14768.046477331682 12839.50145246706 14513.034845034943 15067.869031723136 13913.586383461286 13616.225026155167 0.9672434834812967 0.9969242812462666 1.000049091788818 0.997971871374328 1.0575474757254018 1.0845918342979792 0.9429560269313916 1.0658633224081644 1.1066113407188505 1.021838751690349 1.0 13.733039164329583 -6.702884460075577 5.823111200910726 1.047399125498065 0.9909086940431816 0.22713115062192257 0.04247921665901421 0.24520015135329576 16.738996311259015 0.007171004342584778 0.014971018704583346 1.982054262390946e-07 6.702884460075577 -0.056490431454883416 LLPQVS(ph)AWAGLR ddPTM_A549_PD325901_60min_R1 1 LLPQVSAWAGLR 12 0 U3KQ59;A0A087WWC0;A0A087X1F1;A0A087X1M5;A0A087X0U8;A0A087WXC9;Q13477-4;Q13477-2;Q13477-3;Q13477 U3KQ59 MADCAM1 Mucosal addressin cell adhesion molecule 1 1 LLPQVS(1)AWAGLR 64.878 0.0062044 9476900.0 3296.6 3666.4 3242.8 3625.1 4188.7 3466.4 3549.9 3684.2 3677.2 3512.9 3717.8 True False 3631.268405171344 3975.3803952319195 3462.8759085405213 3849.0141938005563 3894.500162230529 3438.1707876812557 3684.9933870798145 3610.7157408010125 3522.6600718074583 3291.0948944847337 3260.5341690759683 1.113703527358047 1.2192420594563307 1.0620578497178874 1.1804857714131431 1.1944362366042083 1.0544808333217466 1.1301808832520646 1.1074000619426987 1.080393545701064 1.0093729198419736 1.0 11.670892623335225 -9.524610539162175 0.30858397868503684 0.9761866522769305 1.1608892829383857 0.544400383913497 0.04669052221249399 0.9043712741153171 0.20945778032775286 0.062195660443893595 0.028658753799234795 2.988061011462672e-10 9.524610539162175 0.1847026306614552 LLPS(ph)PVTCTPK ddPTM_A549_MK2206_60min_R1 2 LLPSPVTCTPK 11 0 H0YCH4;Q9BU19-2;Q9BU19;Q9BU19-5 H0YCH4 ZNF692 Zinc finger protein 692 1 LLPS(0.986)PVT(0.013)CT(0.001)PK;LLPS(0.872)PVT(0.124)CT(0.004)PK 84.289 0.00053172 6607700.0 4086.8999999999996 4714.299999999999 4771.6 3979.1499999999996 6410.9 4792.51 4379.700000000001 4540.9 7367.8 5645.299999999999 6684.5 True False 4776.668804888242 4954.237733596642 5448.284630011468 4954.04192863083 5467.865102467874 5299.650227189333 5175.434798244939 5184.586480923019 5699.005063958928 4370.0228091688705 5024.554167185275 0.9506652025136995 0.9860054382440813 1.084331952393612 0.985966468624231 1.0882289095772528 1.0547503421896962 1.0300286604620656 1.0318500524450298 1.1342309933045216 0.8697334457470742 1.0 12.294779875117655 -5.613122907919186 4.565761664850961 1.057129721732263 0.9580561634017708 0.014325428850350597 0.06916771161002694 0.17406925764225442 6.24234688750197 0.007098553037453611 0.030624764254483464 2.437121001036201e-06 5.613122907919186 -0.09907355833049225 LLPS(ph)PVTCTPK ddPTM_A549_PD325901_60min_R1 2 LLPSPVTCTPK 11 0 H0YCH4;Q9BU19-2;Q9BU19;Q9BU19-5 H0YCH4 ZNF692 Zinc finger protein 692 1 LLPS(0.998)PVT(0.002)CTPK;LLPS(0.878)PVT(0.122)CT(0.001)PK 117.98 1.6461e-05 21520000.0 5315.0 5839.9 5488.0 5818.1 5799.6 6358.299999999999 5705.9 5923.5 7176.1 6187.5 6646.9 True False 5854.5748873038 6332.048868130834 5860.448682024912 6177.470823136194 5392.256103533835 6306.520112887643 5923.041146888282 5805.351145604149 6874.513472559969 5796.820194034646 5829.373438170706 1.0043231831688935 1.0862314681486371 1.0053308034188932 1.0597143738786998 0.9250146968155052 1.0818521372455885 1.0160682292378527 0.9958790952713271 1.1792885711431167 0.9944156529888956 1.0 12.509125110416948 LLPSAPQTLPDGPLAS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 LLPSAPQTLPDGPLASPAR 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 LLPSAPQT(0.001)LPDGPLAS(0.999)PAR;LLPSAPQTLPDGPLAS(1)PAR 168.64 5.3188999999999995e-34 57102000.0 1603.39 1650.15 1972.7 1301.44 2559.3999999999996 1917.31 1793.0900000000001 1558.07 2672.8 2209.34 2414.4 True False 1874.0030328781636 1734.13558663948 2252.4585232675877 1620.292858423861 2182.9156504166776 2120.1984715926255 2118.871242867095 1778.9311938892572 2067.4150675845463 1710.24855954673 1814.8378459499038 1.0326008117255745 0.9555319724621548 1.24113486408403 0.8928031019629656 1.2028158081936617 1.1682578012819063 1.1675264804487573 0.9802149530103872 1.1391734375598945 0.9423699000786316 1.0 10.825624935200066 LLPSAPQTLPDGPLAS(ph)PAR ddPTM_A549_PD325901_60min_R1 3 LLPSAPQTLPDGPLASPAR 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 LLPSAPQTLPDGPLAS(1)PAR;LLPS(0.006)APQT(0.292)LPDGPLAS(0.702)PAR;LLPSAPQTLPDGPLAS(1)PAR 164.59 4.821e-27 72358300.0 4105.2 4045.21 3566.1100000000006 4022.87 4631.33 4800.5 4640.030000000001 4600.84 4893.860000000001 4722.389999999999 5285.219999999999 True False 4521.956881911489 4386.114043365732 3808.127669361489 4271.353543299343 4306.04135802113 4761.406319600701 4816.608880771843 4509.0726369108415 4688.18808305658 4424.21748947188 4635.171445769997 0.9755748918496151 0.946267920115112 0.8215721282190632 0.9215092889816039 0.9289928988388925 1.0272341326114063 1.0391436297717582 0.972795222283691 1.0114379021157816 0.9544884242651626 1.0 12.17840698691909 -7.16378928685604 4.69010238744176 1.0069271933322146 0.9132739695425665 0.4891247484431974 0.04152191580377557 0.12589405826012387 4.612123454200157 0.005616434056364433 0.009873833911892223 6.858208957160825e-08 7.16378928685604 -0.09365322378964813 LLPSLIGR ddPTM_A549_PD325901_60min_R1 2 LLPSLIGR 8 0 O76021;J3QSV6;I3L3C4;I3L3U9 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 0 ; 70.91199999999999 0.017654 1754240.0 927.29 1161.47 1181.5700000000002 1145.18 1363.91 1208.0900000000001 1158.1 1312.8600000000001 1220.98 1201.63 1299.38 False True 1021.4277981651815 1259.35115307932 1261.7584455576123 1215.9151677075174 1268.1136668340632 1198.2517155809633 1202.1721292366362 1286.6739773812542 1169.6664566723243 1125.7588767285408 1139.564497448473 0.8963317130817922 1.1051161701676857 1.107228637240574 1.0669998674318095 1.1128055232270015 1.051499689805968 1.0549399634056202 1.1290927194223448 1.0264153185635834 0.9878851782844731 1.0 10.154266865707395 -8.971647151263356 16.38110096106476 1.011651304020276 1.069567715769257 0.16879754911661815 0.05981265139714469 5.240687090692958 3027.945694608696 0.00974063580874545 0.010183542825205354 1.067463044562845e-09 8.971647151263356 0.05791641174898099 LLPSPVT(ph)CTPK ddPTM_A549_MK2206_60min_R1 1 LLPSPVTCTPK 11 0 H0YCH4;Q9BU19-2;Q9BU19;Q9BU19-5 H0YCH4 ZNF692 Zinc finger protein 692 1 LLPS(0.468)PVT(0.523)CT(0.009)PK 60.973 0.0085141 1405200.0 1110.2 1304.8 991.69 1017.3 1537.3 995.39 1262.9 1111.6 1600.2 1385.0 1560.0 True False 1297.5746182159894 1371.208746748595 1132.326553930772 1266.538545668332 1311.1652064489965 1100.7215091135938 1492.3525827576173 1269.172704132226 1237.7572549943093 1072.1275380757247 1172.6089461902957 1.1065706281976582 1.1693657559099586 0.9656472071184535 1.0801030895962422 1.118160671303812 0.9386944494068054 1.2726771253162794 1.082349497891567 1.055558427228169 0.9143095330791853 1.0 10.195506253310356 -9.539034903539264 1.1203584576461145 1.0119058222470532 1.0893814449421448 0.1989994490433592 0.0902839787318639 0.6254929261994595 1.628588749974424 0.022045122046151795 0.016155768312196662 2.8904475724727545e-10 9.539034903539264 0.07747562269509167 LLQAQGVEVPSKDS(ph)LPK ddPTM_A549_PD325901_60min_R1 1 LLQAQGVEVPSKDSLPK 17 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 LLQAQGVEVPS(0.013)KDS(0.987)LPK 93.837 1.0927e-06 7388800.0 5819.6 5298.4 5972.3 5028.4 5941.2 7194.7 5730.4 6516.3 6892.5 7086.4 6273.5 True False 6410.401507836915 5744.914762736417 6377.6161923573945 5338.99284767502 5523.910608027317 7136.108748595178 5948.473507795198 6386.327284561544 6602.832194314399 6638.963494627414 5501.899270993081 1.1651252035153765 1.0441693822030793 1.1591662948068202 0.9703908749880373 1.0040006797562222 1.2970264261684905 1.0811672869324471 1.1607495830087826 1.2001005233093993 1.2066675828888984 1.0 12.425714011635545 -4.215772407031371 13.905799569618257 1.1024098347984577 1.1279748586891145 0.0 0.10013225059874108 0.0 0.0 0.013458058406641956 0.0 6.084537792708031e-05 4.215772407031371 0.025565023890656846 LLQDSSS(ph)PVDLAK ddPTM_A549_PD325901_60min_R1 2 LLQDSSSPVDLAK 13 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 LLQDS(0.013)S(0.069)S(0.918)PVDLAK;LLQDS(0.001)S(0.191)S(0.808)PVDLAK 197.19 2.2453e-30 15166500.0 6645.6 7048.5 7112.6 8050.200000000001 8348.7 7691.799999999999 8163.5 8917.5 8595.8 9509.7 9386.0 True False 7320.256419767852 7642.501831712905 7595.303807538331 8547.442570669296 7762.3161134514285 7629.160531008162 8474.166459738612 8739.633466856583 8234.548418699706 8909.255919064444 8231.58150275621 0.889289186691134 0.9284366350687215 0.9227028615333722 1.0383718569520726 0.9429920739838809 0.9268158893225638 1.0294700303825184 1.0617198486014214 1.0003604308531115 1.0823261503371286 1.0 13.006953921504538 -4.922271456767551 0.484892510257328 1.004517174230762 0.7647021761931814 0.4726535134516817 0.04488390897904114 3.675650295882075 0.45425599353943363 0.007607676520680737 0.5392092501309402 1.1959927396068502e-05 4.922271456767551 -0.23981499803758055 LLQEGS(ph)PSDITTLSVEPDKK ddPTM_A549_MK2206_60min_R1 1 LLQEGSPSDITTLSVEPDKK 20 1 Q15788-2;Q15788-3;Q15788;B5MCN7 Q15788-2 NCOA1 Nuclear receptor coactivator 1 1 LLQEGS(0.472)PS(0.472)DIT(0.051)T(0.005)LSVEPDKK 98.185 3.4014000000000003e-07 2372000.0 1052.1 713.12 982.91 685.46 1147.3 613.44 844.58 631.66 1279.0 1208.8 1136.7 True False 1229.6687586246107 749.414762018208 1122.301417906902 853.3977307714687 978.5336898191198 678.353813631484 998.0292535794033 721.1997393776197 989.3085421433084 935.7312404519392 854.4260186759672 1.4391752261127604 0.8770973093486942 1.3135150304130943 0.9987965161617013 1.1452526824212024 0.7939292563710458 1.1680698290601754 0.8440751143032874 1.1578633146920754 1.095157708214415 1.0 9.738811769903247 -5.243439207494105 24.212857440060752 1.0551153981904517 1.4391757263249423 0.36315966841947933 0.15089747073427995 1956.7922653058472 2632108.869109666 0.018489322124852475 0.7826993820674443 5.709009852519138e-06 5.243439207494105 0.38406032813449054 LLQEGSPS(ph)DITTLSVEPDKK ddPTM_A549_MK2206_60min_R1 1 LLQEGSPSDITTLSVEPDKK 20 1 Q15788-2;Q15788-3;Q15788;B5MCN7 Q15788-2 NCOA1 Nuclear receptor coactivator 1 1 LLQEGS(0.116)PS(0.879)DIT(0.005)T(0.001)LSVEPDKK 89.04899999999999 1.8561000000000001e-06 1456600.0 804.02 854.92 997.04 717.45 1663.7 763.8 725.82 768.9 1623.7 1023.5 1044.3 True False 939.7189195982885 898.431776341439 1138.4352643781194 893.225282207554 1418.9719338900636 844.6248090305936 857.6920988337425 877.8939296574922 1255.9345425160975 792.2906391483785 784.9714887862342 1.1971376451536262 1.1445406478783622 1.4502886800875152 1.137907930374271 1.8076732138184477 1.07599425086967 1.092641084531558 1.1183768355904744 1.5999747257802854 1.009324097074483 1.0 9.616496444118221 LLQEQLDEIS(ph)SRSPPEKPK ddPTM_A549_MK2206_60min_R1 1 LLQEQLDEISSRSPPEKPK 19 2 G3V2D8;Q68DK2-4;Q68DK2-5;Q68DK2-2;Q68DK2 G3V2D8 ZFYVE26 Zinc finger FYVE domain-containing protein 26 1 LLQEQLDEIS(0.333)S(0.333)RS(0.333)PPEKPK 69.398 0.00025881 2813600.0 1240.7 1270.4 1427.6 1529.4 1601.2 1343.8 1316.5 1377.3 2469.8 1444.0 1920.2 True False 1450.099827797314 1335.057933682875 1630.0551466603176 1904.1030686573747 1365.6656010968136 1486.0000240577538 1555.6910089479786 1572.536492804349 1910.3942434601581 1117.7993970984446 1443.3613451760295 1.0046686040497106 0.9249644506172181 1.1293465438216508 1.3192143984049636 0.9461702751435813 1.0295412365200372 1.0778250464773598 1.0894960558976072 1.3235730954310476 0.7744418269439798 1.0 10.495216808076112 -8.539973820629793 24.924610860885426 1.1556266198417489 1.0647053131733817 0.0 0.16658931074759678 502.3587328449826 732435.5851479009 0.025447498745263548 0.028858408543388947 2.8842053584419345e-09 8.539973820629793 -0.09092130666836717 LLQEQLDEIS(ph)SRSPPEKPK ddPTM_A549_PD325901_60min_R1 1 LLQEQLDEISSRSPPEKPK 19 2 G3V2D8;Q68DK2-4;Q68DK2-5;Q68DK2-2;Q68DK2 G3V2D8 ZFYVE26 Zinc finger FYVE domain-containing protein 26 1 LLQEQLDEIS(0.449)S(0.103)RS(0.449)PPEKPK 63.165 0.00049391 2864700.0 2298.7 1966.8 1663.8 2218.8 2368.9 2829.4 2166.7 2778.1 2445.0 2163.4 2516.3 True False 2532.0623317865 2132.5491384852007 1776.715473242173 2355.8502367395877 2202.5166362613463 2806.358304484581 2249.1549541637332 2722.6886161227094 2342.2451527165344 2026.8025547918471 2206.811052139937 1.1473851960869816 0.966348766659146 0.805105390205155 1.067535997001251 0.998054017413758 1.2716803741594753 1.0191878239791918 1.2337660777448651 1.0613709544572325 0.918430489473244 1.0 11.107747395561823 LLQLS(ph)LER ddPTM_A549_PD325901_60min_R1 1 LLQLSLER 8 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;Q9Y2J4-3;D6RCL7 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 LLQLS(1)LER 57.174 0.024393 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LLQLVEDR ddPTM_A549_MK2206_60min_R1 1 LLQLVEDR 8 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 83.265 0.0093689 1402400.0 271.92 510.67 223.01 243.48 514.62 433.46 259.32 341.54 382.66 512.64 670.12 False True 317.8134481942822 536.6609217520736 254.6361713762382 303.1326109302325 438.9200797129918 479.32844949253865 306.43508730755036 389.95434092238264 295.9881209824538 396.83426795605743 503.71070962887256 0.6309443935159588 1.0654149524584822 0.5055206619764959 0.6017990190313337 0.8713733325947792 0.9515947156368812 0.6083553147665407 0.7741632914847013 0.5876153024432098 0.7878217801810085 1.0 8.97645159491061 -11.007688120421333 1.294193837731405 0.999758525664321 0.7239064441333609 0.06792144251626364 0.17467099387043455 0.47846223315660963 1.4288581912104152 0.11515334270071689 0.026258624301764594 9.824532181613523e-12 11.007688120421333 -0.2758520815309601 LLQLVEDR ddPTM_A549_PD325901_60min_R1 2 LLQLVEDR 8 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 110.87 0.004323 6504100.0 1934.56 1689.48 1926.8 1825.9699999999998 2152.59 1989.0 1899.2 1932.65 1858.09 1942.9099999999999 2207.1 False True 2130.955107052198 1831.8584088305745 2057.56423478965 1938.7560198212468 2001.399504432356 1972.8022434508482 1971.4750952821169 1894.1017796154047 1780.0009389820304 1820.2343310209053 1935.6406919596443 1.1009042721119988 0.9463834979497148 1.0629887268522809 1.0016094556570045 1.033972633839464 1.0191985793879863 1.0185129417207042 0.9785399674036684 0.9195926425683664 0.9403782109881657 1.0 10.91859545832985 -8.317073073789533 3.6211313445665425 0.961578317009718 1.0240143500251568 0.391558502243298 0.040276968649374925 0.21592455214196676 5.761437702579112 0.006954537882154222 0.008600445182520849 4.8186671257634565e-09 8.317073073789533 0.062436033015438874 LLQLVEDRGS(ph)GR ddPTM_A549_MK2206_60min_R1 2 LLQLVEDRGSGR 12 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 LLQLVEDRGS(1)GR;LLQLVEDRGS(1)GR 56.147 0.004733 11107800.0 504.27000000000004 491.24 410.99 379.28 765.21 585.51 763.23 736.19 868.04 733.1700000000001 845.5999999999999 True False 589.3784477821811 516.2420177443133 469.2745620103139 472.203617026526 652.6486226675574 647.4682795699172 901.899011590859 840.5471869873185 671.4303259750411 567.5463877913205 635.6141826272526 0.9272581762509445 0.812193987885032 0.7383009612381694 0.7429091891479134 1.026799968449248 1.0186498307726028 1.4189409806164843 1.3224172933224905 1.0563488737770856 0.8929102013511088 1.0 9.312007506056066 -6.866709749555809 4.600406884534165 1.0819012945024578 0.8014474666841163 0.4836921478792814 0.14855095211389993 0.16466119503420965 5.9746834758890985 0.022857025867715822 0.04438799868516735 1.359221546669479e-07 6.866709749555809 -0.2804538278183415 LLQLVEDRGS(ph)GR ddPTM_A549_PD325901_60min_R1 2 LLQLVEDRGSGR 12 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 LLQLVEDRGS(1)GR;LLQLVEDRGS(1)GR 112.5 1.3702999999999999e-05 19771600.0 1827.29 1804.19 1508.38 1893.87 2144.58 1821.5700000000002 1803.23 2029.26 2048.43 2034.3200000000002 2008.33 True False 2012.795135620199 1956.2354231053557 1610.7477374257903 2010.8500486091584 1993.9520991993572 1806.7357378596091 1871.8529044153188 1988.7848173763266 1962.341610707211 1905.8726880207764 1761.3181418528 1.1427777229971983 1.110665572914337 0.9145126590993841 1.141673387008815 1.1320794647024077 1.02578613989579 1.0627568409908292 1.1291457063425494 1.1141324012270415 1.082071797668486 1.0 10.782439807243227 -10.885771051493446 1.1456119560089972 1.0001829909404538 1.085686134478196 0.011203961724044254 0.0683362504477361 0.6517371955680304 1.5242434594806034 0.04380233541934415 0.01061914195331272 1.3008551735720465e-11 10.885771051493446 0.08550314353774224 LLQNGNS(ph)PAEVAK ddPTM_A549_MK2206_60min_R1 2 LLQNGNSPAEVAK 13 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LLQNGNS(1)PAEVAK;LLQNGNS(1)PAEVAK 142.85 2.3729e-12 6885000.0 4133.2 4480.2 5044.8 4402.1 5585.799999999999 4156.2 4040.4 3783.3 6519.7 6391.2 6484.0 True False 4830.783112961926 4708.22304351859 5760.228498089081 5480.614697617781 4764.136219464516 4596.006325337721 4774.488380215279 4319.594360870323 5042.998359821523 4947.423481118824 4873.8438507037645 0.9911649328413301 0.966018442063699 1.1818656228096691 1.1244953399207487 0.9774905321959777 0.9429941676679024 0.9796145560809998 0.8862808274513329 1.0347065918193774 1.0150968378694436 1.0 12.250844315078286 -6.782835941681373 24.997898017641376 0.9960143891413463 1.067036957249853 0.2617031088802615 0.06727839232149208 310.29200562698554 362517.63286245597 0.010365676025500686 0.019601432371641084 1.6487851160601288e-07 6.782835941681373 0.07102256810850671 LLQNGNS(ph)PAEVAK ddPTM_A549_PD325901_60min_R1 2 LLQNGNSPAEVAK 13 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LLQNGNS(1)PAEVAK;LLQNGNS(1)PAEVAK 161.82 1.1497e-18 8236100.0 6646.9 7848.700000000001 8062.2 7960.200000000001 8944.9 7993.0 8012.4 8996.3 7742.4 7910.6 9025.5 True False 7321.688394810842 8510.137494015045 8609.349373947018 8451.883475074117 8316.641082229775 7927.907658070704 8317.31626655351 8816.86173903918 7417.013852921265 7411.123365968554 7915.420717358424 0.9249904277045522 1.0751339439674275 1.0876679435455423 1.0677743833046343 1.0506884446447022 1.0015775460532246 1.0507737445103498 1.1138841577559997 0.937033433567952 0.9362892549370179 1.0 12.950450318627285 -8.776712825134684 24.999998467553073 0.9702657877553452 1.0483696003623642 0.3779419852080801 0.04999581979172687 197.21194479482122 322800.8353386862 0.008642492047654328 0.009216820882029936 1.6721959793133271e-09 8.776712825134684 0.07810381260701893 LLQPGGGPDVGT(ph)GAPRPGCSPR ddPTM_A549_PD325901_60min_R1 1 LLQPGGGPDVGTGAPRPGCSPR 22 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 LLQPGGGPDVGT(0.616)GAPRPGCS(0.384)PR 45.861999999999995 0.008869799999999999 4151100.0 2535.8 2951.4 2971.0 2328.8 2592.1 2360.3 2626.3 3004.4 2480.4 3312.7 3480.1 True False 2793.232549242706 3200.124835939202 3172.629926074346 2472.644686911461 2410.0398382595445 2341.078499354972 2726.2452836665025 2944.474885093796 2376.15741382335 3103.5355566510816 3052.0697621715203 0.9151928910220408 1.048509727923893 1.039501116716627 0.810153397395542 0.7896411373457016 0.7670461954609175 0.8932447473699957 0.9647469142379066 0.7785396792938098 1.016862587846925 1.0 11.575572223370783 -6.252236985403169 24.692872503614446 0.8768373282825895 1.0058120986210473 0.2747473461016702 0.08929509082467091 625.2698285163359 1677786.7883345284 0.01391251838400386 0.036243428251518224 5.594522368183369e-07 6.252236985403169 0.12897477033845772 LLQPGGGPDVGTGAPRPGCS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LLQPGGGPDVGTGAPRPGCSPR 22 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 LLQPGGGPDVGT(0.013)GAPRPGCS(0.987)PR;LLQPGGGPDVGT(0.034)GAPRPGCS(0.966)PR 94.72 2.7956999999999996e-07 41648000.0 4178.1 5345.700000000001 4415.6 3776.8 5030.700000000001 3693.7 3362.5 3311.3 6034.5 6257.9 6559.4 True False 4883.261135262318 5617.773296669194 5041.798476879591 4702.116169546997 4290.690694127996 4084.5648823203765 3973.422725095009 3780.686915430946 4667.695385116336 4844.236043699692 4930.519949769633 0.9904150444600629 1.1393876008820674 1.022569329045136 0.9536755184951017 0.8702308758183745 0.828424775466372 0.8058831047384075 0.7667927427425965 0.9466943512386403 0.9825000391542941 1.0 12.267524079216635 -6.20645054770191 3.1676294779859226 0.9277765375545473 1.0669172466599506 0.3801365578562492 0.0822172480961504 0.2706016199864107 5.3951731604849575 0.013910825873567406 0.04011292899457413 6.216550304148365e-07 6.20645054770191 0.13914070910540333 LLQPGGGPDVGTGAPRPGCS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LLQPGGGPDVGTGAPRPGCSPR 22 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 LLQPGGGPDVGTGAPRPGCS(1)PR 157.62 3.527e-33 26197000.0 7319.4 7216.5 7893.5 6043.5 5850.0 6479.2 6957.9 7064.9 5284.0 7778.6 8480.4 True False 8062.460099742503 7824.65978130895 8429.200377471507 6416.793269215657 5439.116181404398 6426.435543371912 7222.686692008971 6923.985027193167 5061.9318556049775 7287.4578684958215 7437.36456168482 1.0840479894286743 1.0520742551224884 1.1333585045563508 0.862777831582056 0.7313230562106868 0.8640742954136031 0.9711352229818331 0.9309729232399824 0.6806082737536635 0.979844111184051 1.0 12.860575775974766 -6.271228713594855 21.846213137004643 0.8540946912479285 1.0860516474332649 0.4708071011658771 0.09791083839593505 88.46790652045213 197430.0725739052 0.01746276827999593 0.04117809547007525 5.355145638589256e-07 6.271228713594855 0.2319569561853364 LLQTCFSS(ph)PADDSMDR ddPTM_A549_PD325901_60min_R1 4 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQTCFS(0.111)S(0.889)PADDSMDR;LLQT(0.001)CFS(0.095)S(0.825)PADDS(0.079)MDR;LLQTCFS(0.032)S(0.968)PADDSMDR;LLQT(0.001)CFS(0.201)S(0.796)PADDS(0.003)MDR 149.0 1.3015e-14 21294000.0 9138.3 9817.5 9979.9 9199.6 9840.8 9178.2 9838.4 10791.7 8820.400000000001 9875.199999999999 10119.7 True False 10066.013488739098 10644.855179519243 10657.196028013925 9767.838398192493 9149.61615691699 9103.455782222512 10212.805695779056 10576.451077575133 8449.70926176724 9251.678186687825 8875.041054063713 1.1341934563930902 1.1994147536529047 1.2008052653609074 1.100596418505578 1.0309378966452842 1.0257367517251328 1.1507333468731173 1.191707284861784 0.9520755126984206 1.0424377904653925 1.0 13.115538077784475 -7.5831474013011775 0.37695141062712856 0.9708258407895526 1.193327563418066 0.259577595432649 0.07209336092053163 0.999963591442462 0.2901355935760122 0.031900710611640244 0.08293272198750401 2.6112749267226563e-08 7.5831474013011775 0.22250172262851342 LLQTTNNS(ph)PMNSKPQQIK ddPTM_A549_MK2206_60min_R1 1 LLQTTNNSPMNSKPQQIK 18 1 O00178;B0QY59 O00178 GTPBP1 GTP-binding protein 1 1 LLQT(0.001)T(0.004)NNS(0.989)PMNS(0.007)KPQQIK 98.26899999999999 2.6682e-07 5423600.0 2046.8 2348.1 1896.3 1858.5 3162.6 2096.0 1828.1 2663.4 3033.2 3269.6 3239.6 True False 2392.249800544486 2467.608260453998 2165.223854449398 2313.8325834312363 2697.385729470887 2317.7973287878035 2160.2421066903157 3040.9451063204156 2346.1850430250847 2530.995089164181 2435.117911588514 0.9823958787210991 1.0133424129939932 0.889165918473716 0.9501932421505788 1.1077023074054293 0.9518213954887392 0.8871201252349679 1.248787622089601 0.9634790298489427 1.0393727043439647 1.0 11.249775915838477 LLQTTNNS(ph)PMNSKPQQIK ddPTM_A549_PD325901_60min_R1 2 LLQTTNNSPMNSKPQQIK 18 1 O00178;B0QY59 O00178 GTPBP1 GTP-binding protein 1 1 LLQT(0.009)T(0.047)NNS(0.941)PMNS(0.003)KPQQIK;LLQT(0.001)T(0.004)NNS(0.993)PMNS(0.002)KPQQIK 106.03 1.1235e-09 22942000.0 5853.7 4720.8 5626.0 5726.8 6988.2 7260.799999999999 6228.0 6473.700000000001 6335.0 6830.1 5983.0 True False 6447.96331473382 5118.638383649043 6007.814191886322 6080.531429493541 6497.37293998123 7201.670452110567 6465.009948092371 6344.576974980598 6068.7619805559225 6398.84632036784 5247.128929361862 1.2288555134699157 0.9755122186928147 1.1449717117236857 1.158830192920957 1.2382720202706012 1.3724973312188862 1.2321042679007743 1.2091521021100968 1.1565871664781038 1.2194947763835577 1.0 12.357312524131231 -10.12214528655343 0.8169011632474564 1.0100442611634424 1.190935437318615 0.0 0.10937206150647631 0.49705131087045606 0.65643024840565 0.04702024847923275 0.01960087023365368 7.548396653974893e-11 10.12214528655343 0.18089117615517258 LLRDDEAHLQEDQGEEECFHDCS(ph)AS(ph)FEEEPGADKVENK ddPTM_A549_PD325901_60min_R1 1 LLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENK 38 2 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 2 LLRDDEAHLQEDQGEEECFHDCS(1)AS(1)FEEEPGADKVENK 57.507 0.00075216 4032000.0 851.12 1126.9 942.53 934.38 1087.4 1042.0 1239.1 1289.2 648.53 916.26 1133.8 True False 937.5250758385716 1221.8678178558948 1006.4957536933196 992.0945304690531 1011.024775326349 1033.5142974739983 1286.2546285615363 1263.4858946421652 621.2745394238259 858.4071872300905 994.3497877503721 0.9428523919732901 1.2288108600297105 1.0122149831906 0.9977319276283838 1.0167697401672933 1.0393870549439472 1.2935635371045564 1.2706654239859492 0.6248048192672764 0.863284930318294 1.0 9.957609635408339 -8.75802046805487 24.999999780124202 0.822824500607795 1.0998155201831432 0.43368993101841913 0.13780372774331545 71.67310528371424 524092.26520161156 0.029303194352371484 0.03257558611154967 1.7457398752424098e-09 8.75802046805487 0.2769910195753482 LLRDDEAHLQEDQGEEECFHDCS(ph)ASFEEEPGADKVENK ddPTM_A549_MK2206_60min_R1 3 LLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENK 38 2 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 1 LLRDDEAHLQEDQGEEECFHDCS(0.963)AS(0.037)FEEEPGADKVENK;LLRDDEAHLQEDQGEEECFHDCS(0.601)AS(0.399)FEEEPGADKVENK;LLRDDEAHLQEDQGEEECFHDCS(0.838)AS(0.162)FEEEPGADKVENK 119.5 1.7542999999999997e-21 37094400.0 2710.09 2579.44 3326.7 2497.76 3892.17 3399.7299999999996 2903.23 3151.2 4560.7 3709.94 4650.5 True False 3167.4869366609373 2710.7224783209667 3798.476083213001 3109.711312128708 3319.636948926421 3759.487172041868 3430.709310982179 3597.8922501452603 3527.7087319413517 2871.861977334768 3495.652502729466 0.9061217996318881 0.7754553623978321 1.0866286280593065 0.8895939483974998 0.9496472965589089 1.0754750848679595 0.9814217255014398 1.0292476861861881 1.0091703134641832 0.8215524784263792 1.0 11.771346060602877 -5.757287392111929 24.999999983234254 1.0021082420520395 0.8407885718256184 0.2950631612781741 0.07993980711899974 52.263514291704766 314676.65301571117 0.007192103359825566 0.02598771765707157 1.748689119740142e-06 5.757287392111929 -0.16131967022642113 LLRDDEAHLQEDQGEEECFHDCS(ph)ASFEEEPGADKVENK ddPTM_A549_PD325901_60min_R1 2 LLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENK 38 2 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 1 LLRDDEAHLQEDQGEEECFHDCS(0.96)AS(0.04)FEEEPGADKVENK;LLRDDEAHLQEDQGEEECFHDCS(0.573)AS(0.427)FEEEPGADKVENK 214.44 7.985999999999999e-114 36768000.0 2782.3999999999996 2717.4 3049.9 3221.9 2790.0 3022.1 2601.1 3500.2 2909.3999999999996 2989.8999999999996 2858.1 True False 3064.8671997053802 2946.40483471613 3256.8845545385884 3420.909445534195 2594.040024977482 2997.489019574063 2700.0862838765333 3430.3857651462176 2787.1280357110363 2801.1172037404745 2506.571818988655 1.22273264882631 1.1754719383643824 1.2993382155922695 1.3647761534774034 1.0348955514963534 1.1958520385757316 1.0772028407173095 1.3685567431817296 1.1119282577889906 1.1175092540818008 1.0 11.291499855871667 -9.67925927811114 0.3983966201909973 0.9737164866717355 1.2333465157121113 0.18968197148345223 0.10808400368284228 0.9510459593870876 0.3274129661406021 0.09856055949738927 0.03991741177700263 2.0928626230728546e-10 9.67925927811114 0.2596300290403758 LLRDDEAHLQEDQGEEECFHDCSAS(ph)FEEEPGADKVENK ddPTM_A549_MK2206_60min_R1 1 LLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENK 38 2 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 1 LLRDDEAHLQEDQGEEECFHDCS(0.15)AS(0.85)FEEEPGADKVENK 140.5 9.539699999999999e-32 9845900.0 948.73 1479.1 1199.9 1477.2 1678.5 1637.6 1396.0 1372.0 2343.1 1915.2 2019.0 True False 1108.8524297784688 1554.3798722531023 1370.0638627610795 1839.1140663140288 1431.5948734955039 1810.8897450490979 1649.6351298833117 1566.4852015737813 1812.3915911618333 1482.5549898358322 1517.6265784347477 0.730649057900738 1.0242176134370693 0.9027674411014456 1.2118356995374036 0.9433116774826286 1.1932380275764651 1.0869835526896974 1.032194100863353 1.1942276294548695 0.9768905018551483 1.0 10.567601134892218 -4.60322332312458 0.8760232257506104 1.09119938641512 8.361608579590698e-11 0.4710933159430776 0.09974055036060783 3.632704295678551 0.9136084742535567 0.014730030023200497 5.023316857185637 2.4933122849584438e-05 4.60322332312458 -1.091199386331504 LLRDDEAHLQEDQGEEECFHDCSAS(ph)FEEEPGADKVENK ddPTM_A549_PD325901_60min_R1 2 LLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENK 38 2 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 1 LLRDDEAHLQEDQGEEECFHDCS(0.007)AS(0.993)FEEEPGADKVENK;LLRDDEAHLQEDQGEEECFHDCS(0.023)AS(0.977)FEEEPGADKVENK 245.5 1.9280999999999994e-144 53097000.0 3635.6 4651.9 5228.5 4690.299999999999 4286.0 4751.3 3412.0 4746.7 3863.8 4497.1 5140.6 True False 4004.6834356127356 5043.931938844469 5583.337451524644 4980.009178555831 3984.966145897307 4712.606988088495 3541.8455271180424 4652.023344785888 3701.417922726437 4213.152338520115 4508.338788948281 0.8882836057995012 1.118800554920393 1.2384467345736325 1.1046217712749982 0.8839100902678461 1.0453089727065226 0.7856209776870595 1.0318708425794962 0.8210159209418942 0.93452434161519 1.0 12.138380218710447 -6.755009107340433 24.933937179028547 0.9207926911734674 1.10055041970106 0.32904882337578445 0.10800437210282013 124.1333010570973 481332.6003452865 0.015822425452337925 0.03232317552901396 1.757886749937603e-07 6.755009107340433 0.17975772852759264 LLRPNS(ph)LR ddPTM_A549_MK2206_60min_R1 2 LLRPNSLR 8 1 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LLRPNS(1)LR;LLRPNS(1)LR 117.02 0.00035485 38610000.0 3347.6 3438.7 2641.14 2965.3999999999996 3719.0 3060.8399999999997 2362.11 2619.4 4508.6 3807.0 3628.7000000000003 True False 3912.5930390378726 3613.715142124764 3015.693366524538 3691.923133121864 3171.940026529511 3384.7360571788454 2791.274811352914 2990.707971576065 3487.409298754745 2946.99605592367 2727.5936429748263 1.4344486573779505 1.324872988845764 1.1056241366054431 1.3535458782985357 1.1629078380861977 1.2409238692488345 1.0233470145166619 1.096463903000696 1.2785662951433017 1.0804380863380934 1.0 11.413413012260023 -14.999999976101021 0.036552944909918124 2.7510089703611017e-09 1.869463013136994 0.43487948886639005 0.10327285170656755 583.488431762303 1.6433601320460511 71.04681414976012 24.45508755209653 1.0000000550294338e-15 14.999999976101021 1.869463010385985 LLRPNS(ph)LR ddPTM_A549_PD325901_60min_R1 3 LLRPNSLR 8 1 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LLRPNS(1)LR;LLRPNS(1)LR;LLRPNS(1)LR 95.48299999999999 0.00069955 58442600.0 4848.92 4806.700000000001 5029.6 5032.9400000000005 5168.75 5169.3 5439.129999999999 4791.72 4765.62 5008.26 4918.450000000001 True False 5341.1787888137615 5211.777478115116 5370.9389014417775 5343.813273163936 4805.71483121948 5127.20293467595 5646.119068556142 4696.145385568381 4565.337564289966 4692.0376088850035 4313.511830623404 1.238243686013453 1.2082446235836313 1.245142962935968 1.2388544376361728 1.1141072564358636 1.1886377355628923 1.3089378887225966 1.0887058086240782 1.0583806753185994 1.0877535041342157 1.0 12.074647197509634 -8.477972449293246 4.23466503440036 1.0288435829781621 1.216241484671431 0.7071389768464621 0.04982053584403072 0.07748334097700862 2.9878496883637893 0.008268652869863585 0.009858894701328324 3.326806571691262e-09 8.477972449293246 0.18739790169326875 LLRPSLAELHDELEKEPFEDGFANGEES(ph)TPTR ddPTM_A549_PD325901_60min_R1 1 LLRPSLAELHDELEKEPFEDGFANGEESTPTR 32 2 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 LLRPSLAELHDELEKEPFEDGFANGEES(0.507)T(0.414)PT(0.08)R 101.6 1.1448e-14 3806200.0 497.58 565.09 301.32 521.93 497.02 519.67 380.55 357.72 570.63 396.19 427.85 True False 548.0939553009639 612.7121174835273 321.76938718435605 554.1684307109668 462.1110298259166 515.4379798160394 395.0320384949503 350.58499397408866 546.6484055192781 371.17449578579163 375.2271623646115 1.4606990385423544 1.6329098182080688 0.8575322350243129 1.4768878330094786 1.2315500480129935 1.3736691570190322 1.0527810300446594 0.9343273332473254 1.4568465728184545 0.9891994317434785 1.0 8.551620456834659 -11.070185216598658 1.362307291051403 0.9988387201795209 1.2880670343892964 0.1766506608385151 0.23161265365725708 0.6319850672098095 2.079310489525149 0.16810072022343878 0.03648034724179286 8.507751248156974e-12 11.070185216598658 0.28922831420977546 LLRQS(ph)PPLPGR ddPTM_A549_MK2206_60min_R1 2 LLRQSPPLPGR 11 1 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 LLRQS(1)PPLPGR;LLRQS(1)PPLPGR 67.51899999999999 0.001277 8730800.0 1272.55 981.75 651.99 912.8 1059.72 926.1 767.28 1008.41 1430.3400000000001 972.22 2028.24 True False 1487.3253291395774 1031.7168816067087 744.4519859001547 1136.436040977149 903.8365918025952 1024.0992873045723 906.6848441668099 1151.3552056261046 1106.370273783627 752.5948267638856 1524.5720314237221 0.9755690767530598 0.6767255730404811 0.4883022714282302 0.7454131504143414 0.5928461057747118 0.6717290270294521 0.594714336534235 0.7551989554412271 0.7256923588913294 0.49364333809867594 1.0 10.574188599603264 -10.310685895512657 0.5799108974149433 1.0194895509666126 0.6723700558221195 0.0 0.18896734655271594 0.5842506738123542 0.3401766334043895 0.10072367050862621 0.026100300487507194 4.8900590612696465e-11 10.310685895512657 -0.34711949514449314 LLRQS(ph)PPLPGR ddPTM_A549_PD325901_60min_R1 2 LLRQSPPLPGR 11 1 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 LLRQS(1)PPLPGR;LLRQS(1)PPLPGR 97.463 7.7791e-05 10957000.0 1206.27 1017.21 1086.8799999999999 1157.33 1309.23 1105.22 1150.76 1139.79 1163.36 1246.65 1370.5900000000001 True False 1328.7296423909609 1102.9338565988057 1160.6422127403844 1228.8156456128652 1217.2742013983043 1096.2194547545237 1194.5528015200337 1117.0559943020426 1114.4680248933764 1167.9363062453806 1202.0161188858553 1.105417491092013 0.9175699387634763 0.9655795746035251 1.022295480323384 1.0126937420161983 0.9119839888425172 0.9937910005959493 0.9293186478542717 0.9271656239738059 0.971647790653537 1.0 10.231240527201008 -7.206782917246464 24.999496602819228 0.960778486609397 0.9986729886143838 0.18695322977782358 0.04960628845690168 544.6065737087254 249098.93833103793 0.007391032014637085 0.012801640089775034 6.211794541311902e-08 7.206782917246464 0.037894502004986785 LLS(ph)AER ddPTM_A549_MK2206_60min_R1 1 LLSAER 6 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;A0A075B730;P58107;Q15149-3;Q15149-2;H0YDN1;Q15149-4;P15924-2;P15924-3;P15924 Q15149;Q15149-3;Q15149-4;P15924-2 PLEC;EPPK1;DSP Plectin;Epiplakin;Desmoplakin 1 LLS(1)AER 64.265 0.058846 7453000.0 987.59 1332.9 1007.9 769.93 1238.3 1173.7 884.29 1069.5 1509.1 1510.7 1259.2 True False 1154.271047742686 1400.738916723791 1150.8353756787155 958.5628845634716 1056.1477103660907 1297.9001549609948 1044.9540465648377 1221.1049002063842 1167.2912595375028 1169.4318207732838 946.5058878479614 1.2195075197758287 1.4799051275936634 1.2158776722407203 1.0127384275896305 1.115838500241576 1.371254179846664 1.1040121989528395 1.2901186520696342 1.2332636009180393 1.235525141245747 1.0 9.886467670180869 -10.668206046602004 0.6946747725987891 0.9804885576854798 1.2290375991870865 0.0 0.1399610553144114 0.8610347120270805 0.6506783421070469 0.12517635638270438 0.024890749744014375 2.146811699489167e-11 10.668206046602004 0.24854904150160673 LLS(ph)AER ddPTM_A549_PD325901_60min_R1 2 LLSAER 6 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;A0A075B730;P58107;Q15149-3;Q15149-2;H0YDN1;Q15149-4;P15924-2;P15924-3;P15924 Q15149;Q15149-3;Q15149-4;P15924-2 PLEC;EPPK1;DSP Plectin;Epiplakin;Desmoplakin 1 LLS(1)AER;LLS(1)AER 75.21300000000001 0.045926 23527000.0 3465.9 4060.8 3496.0 3874.4 4261.7 4004.6000000000004 4260.1 4633.6 4141.2 4414.6 4278.5 True False 3817.755616539273 4403.017867378841 3733.2595831558115 4113.712888599175 3962.372894066855 3971.9878653209 4422.2204367161685 4541.179213011123 3967.1597654109246 4135.86140259965 3752.271623646118 1.0174518263764507 1.1734272752622283 0.9949331918375802 1.0963259862839678 1.0559930867202465 1.058555526814789 1.1785448603582316 1.2102479960121906 1.0572688129533645 1.1022286810305046 1.0 11.873548551722022 -9.391003101317263 1.9276069363992925 1.0174007129459985 1.0971824624686823 0.017888054573757417 0.07000059214801325 0.332337131595898 2.5179789730190443 0.014118426764363973 0.012159898082999556 4.064404267447004e-10 9.391003101317263 0.0797817495226838 LLS(ph)DPELSATESPLADK ddPTM_A549_MK2206_60min_R1 2 LLSDPELSATESPLADK 17 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(0.954)DPELS(0.021)AT(0.021)ES(0.003)PLADK;LLS(0.999)DPELSATESPLADK 81.311 0.00023483 13242200.0 1262.8200000000002 1407.78 1503.69 1180.27 2455.2 1561.9299999999998 1166.21 1587.05 2138.18 1588.0 1686.21 True False 1475.9531430152379 1479.429988885451 1716.9358528170737 1469.4362029843332 2094.0433323837724 1727.2123958747782 1378.0952613332488 1812.019197636785 1653.8856439718365 1229.2696970861011 1267.4775199714998 1.1644807262920338 1.167223848608153 1.3546085242250927 1.1593390650568498 1.652134495001425 1.3627163943022957 1.087273927638761 1.4296263003366954 1.3048638874550023 0.969855226397816 1.0 10.307744444424635 -10.57296259035644 0.7765781553732871 0.9910605392481927 1.3022057400756704 0.3833877422409917 0.15152883812880538 0.6202129971080863 0.6419482937543097 0.11570468950138764 0.02885804148487626 2.6732366683789063e-11 10.57296259035644 0.31114520082747765 LLS(ph)DPELSATESPLADK ddPTM_A549_PD325901_60min_R1 1 LLSDPELSATESPLADK 17 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(1)DPELSATESPLADK 174.95 4.7171e-30 11596000.0 1600.7 1624.7 2224.9 2130.7 2080.7 1627.5 1996.0 2502.0 1994.5 1895.4 2116.2 True False 1763.2018856269406 1761.6191708851456 2375.8950934105737 2262.308499829205 1934.5588100253203 1614.2461795959057 2071.958872253109 2452.0956472189723 1910.678101060583 1775.724120529013 1855.9208156970683 0.9500415484939193 0.9491887563228263 1.2801705079848504 1.2189682235874384 1.0423714167453402 0.8697818171674573 1.1164047812432658 1.3212285925560816 1.0295041064793211 0.9567887301603791 1.0 10.85791944273632 -8.975705117395131 24.925089998130467 1.013016374099482 1.0960026297714698 0.09191609498879882 0.1349826300012302 356.5755163130805 365829.0805635283 0.02445193998901679 0.025305207833797555 1.0575353238222284e-09 8.975705117395131 0.08298625567198781 LLS(ph)DPELSATESPLADKK ddPTM_A549_MK2206_60min_R1 2 LLSDPELSATESPLADKK 18 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(1)DPELSATESPLADKK;LLS(1)DPELSATESPLADKK 201.61 3.7448e-49 24949000.0 5077.3 5591.7 4956.700000000001 4603.1 7226.4 5690.4 5639.1 5319.5 7831.5 6569.9 7211.2 True False 5934.224111933029 5876.293645918242 5659.6345933393095 5730.859706641015 6163.406132754194 6292.554351018183 6663.65147630729 6073.555415285515 6057.6777543356675 5085.755027006286 5420.460021004782 1.094782378052299 1.0840950072774382 1.0441244048305318 1.0572644543882632 1.1370632951576853 1.1608893574777703 1.229351651056373 1.1204870789102637 1.1175578697862558 0.9382515519528816 1.0 12.404199579388742 -10.509416814700655 0.8885928090033085 1.0020750957111653 1.116099141555498 0.5143006944594029 0.052618978306985226 0.4709321215397333 0.6837546062520846 0.033035451739800506 0.010099517863407941 3.094447973062292e-11 10.509416814700655 0.11402404584433268 LLS(ph)DPELSATESPLADKK ddPTM_A549_PD325901_60min_R1 1 LLSDPELSATESPLADKK 18 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(1)DPELSATESPLADKK 113.26 3.5858e-10 15918000.0 1905.2 2086.9 2014.6 2144.2 1809.5 2090.2 1823.0 2291.5 2634.8 2508.5 2469.1 True False 2098.6145014658878 2262.770386976188 2151.3228707739404 2276.6423641684787 1682.4069624361125 2073.178104203602 1892.3752625838767 2245.7942348530255 2524.0685187638123 2350.1128818967113 2165.4163529144857 0.9691505740414827 1.0449585752553643 0.9934915601234947 1.0513647230493532 0.776943870480945 0.9574039197650197 0.8739082717450081 1.0371189040991389 1.165627347076514 1.0852937721346927 1.0 11.080428728798704 -8.510866997094409 24.023129126509406 1.0794318739507942 0.9548876438605207 0.34770913253562585 0.08040562728705049 338.33514849946397 676661.0748134049 0.015302217507788901 0.018000561529297947 3.084132322724467e-09 8.510866997094409 -0.12454423009027349 LLS(ph)DSLPPSTGTFQEAQSR ddPTM_A549_MK2206_60min_R1 2 LLSDSLPPSTGTFQEAQSR 19 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 LLS(0.902)DS(0.098)LPPSTGTFQEAQSR;LLS(0.907)DS(0.093)LPPSTGTFQEAQSR 257.02 2.0408999999999998e-97 22057000.0 11466.5 11394.9 11169.099999999999 9410.2 15287.5 11143.7 11220.900000000001 10302.900000000001 15978.9 15237.099999999999 16014.0 True False 13401.7648709905 11974.851738446934 12753.046328498001 11715.699422439931 13038.729001228787 12322.918937410612 13259.592284317801 11763.367626307956 12359.704663059967 11795.02852737446 12037.281836084232 1.1133547468180025 0.9948136050574017 1.0594623023835927 0.9732844658766491 1.0831954571456914 1.0237293689070337 1.1015437259738692 0.9772445130465284 1.0267853516571495 0.9798747497974527 1.0 13.555222030423868 -8.28858155525494 24.9914580997187 1.010346749517035 1.0454860242067663 0.24342024852463018 0.04266323245361436 1010.3094211104898 930251.905673472 0.00622720631748825 0.007529814285561252 5.145391737024825e-09 8.28858155525494 0.035139274689731215 LLS(ph)DSLPPSTGTFQEAQSR ddPTM_A549_PD325901_60min_R1 3 LLSDSLPPSTGTFQEAQSR 19 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 LLS(0.636)DS(0.364)LPPSTGTFQEAQSR;LLS(0.883)DS(0.117)LPPSTGTFQEAQSR;LLS(0.994)DS(0.006)LPPSTGTFQEAQSR 287.48 2.667199999999999e-127 29470700.0 18848.8 18072.5 17331.489999999998 18572.0 19288.6 20096.4 20529.0 22460.4 22298.5 23006.7 23182.0 True False 20762.31630024683 19595.53300044426 18507.709134115867 19719.150259927705 17933.835278057584 19932.741581340186 21310.24232889985 22012.40970215707 21361.371590122537 21554.053035652018 20330.760962805725 1.0212267183816002 0.9638366727292433 0.910330369235807 0.9699169793006304 0.8821034938567613 0.9804227996092375 1.048177309638633 1.0827145005751555 1.0506921816257773 1.0601695172691399 1.0 14.311376594570772 -7.5796562561019245 5.261104908294664 1.0312621865176723 0.9475540472816241 0.5767716470573331 0.03935538030892809 0.1298046750386902 7.4931848322843955 0.006306793649191845 0.009465341707823023 2.6323506720059445e-08 7.5796562561019245 -0.08370813923604825 LLS(ph)GDSTEK ddPTM_A549_MK2206_60min_R1 1 LLSGDSTEK 9 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LLS(0.992)GDS(0.006)T(0.002)EK 108.9 0.00042506 11591000.0 2552.0 2276.0 1920.6 2357.6 3186.6 2620.6 2312.4 3191.3 3052.7 3465.1 2946.7 True False 2982.7152095903493 2391.8386784179966 2192.969959845761 2935.2121058366843 2717.8553612634964 2897.910152586507 2732.5331478095777 3643.6765479463593 2361.268324160186 2682.3315033835324 2214.953065217271 1.3466268231276342 1.0798597568402084 0.9900751371590107 1.3251802721827701 1.227048737033574 1.3083393043826157 1.2336754176511346 1.6450355563579133 1.0660579500489606 1.2110105381038467 1.0 11.113060413105723 -8.971107505973562 24.988817914260032 1.0291429328195583 1.2607123543957732 0.15871304752088788 0.16603712486946978 161.9733432578118 140090.220094302 0.02752764362347967 0.028900841798300252 1.0687902763631023e-09 8.971107505973562 0.23156942157621496 LLS(ph)GDSTEK ddPTM_A549_PD325901_60min_R1 3 LLSGDSTEK 9 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LLS(0.956)GDS(0.043)T(0.001)EK;LLS(0.51)GDS(0.308)T(0.182)EK;LLS(0.911)GDS(0.055)T(0.034)EK 81.92299999999999 0.0015543 21541300.0 9909.5 9562.599999999999 10726.2 10863.2 11052.3 10298.7 10738.1 11648.0 11702.5 13174.999999999998 13960.099999999999 True False 10915.505145011668 10368.47386194762 11454.144433880396 11534.19519188277 10276.024576365096 10214.8308017231 11146.744271613787 11415.671502320773 11210.684621539976 12343.128251540433 12243.096200365115 0.8915641081613117 0.8468833122162684 0.9355594570545651 0.9420978977146971 0.8393321761254023 0.8343339490723328 0.910451415980981 0.9324170385903146 0.9156739796919713 1.0081704864144034 1.0 13.579680832027972 -10.146443213482247 0.4326001382552268 1.0139326773355404 0.8839535862555072 0.5994480409994389 0.03559898357164988 0.8192771793985628 0.2682552963953604 0.04530862834600961 0.011797176295392188 7.13767528257578e-11 10.146443213482247 -0.12997909108003314 LLS(ph)GDSTEKR ddPTM_A549_MK2206_60min_R1 2 LLSGDSTEKR 10 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LLS(0.976)GDS(0.022)T(0.002)EKR;LLS(0.971)GDS(0.028)T(0.001)EKR 71.558 0.0010737 44145000.0 9904.6 12252.3 12246.1 8918.1 15325.199999999999 8916.0 9217.8 8703.9 14612.0 16300.6 16911.7 True False 11576.254335779222 12875.889736195446 13982.781123225643 11103.034900348726 13070.883381169675 9859.4852020382 10892.554942864172 9937.704479575825 11302.405330569205 12618.283138741632 12712.058150824625 0.9106514616618769 1.012887888288978 1.0999620169546334 0.8734254334439524 1.0282271545714863 0.775601014804878 0.8568679291447056 0.7817541708563669 0.8891090015849261 0.9926231448149165 1.0 13.633910008916992 -6.28161207322402 24.9405150475074 0.9177507040761018 1.0083392191017386 0.2070311863051778 0.0893041738442689 1090.6395567515447 1348410.5656761732 0.013410536998392862 0.031196307838956588 5.228630197151849e-07 6.28161207322402 0.0905885150256368 LLS(ph)GDSTEKR ddPTM_A549_PD325901_60min_R1 2 LLSGDSTEKR 10 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LLS(0.697)GDS(0.248)T(0.055)EKR;LLS(0.918)GDS(0.081)T(0.001)EKR 90.79299999999999 0.00027375 69593000.0 8562.9 9506.4 10339.7 9078.4 10687.1 11267.2 9925.9 10509.0 11743.099999999999 12142.599999999999 13779.4 True False 9432.19930432619 10307.5376907137 11041.414219667085 9639.15214945767 9936.474964493484 11175.443658828252 10303.63555616089 10299.389750848984 11249.578344730267 11375.914163730913 12084.621154813434 0.7805126187649866 0.852946696356145 0.9136748333454517 0.7976379255892762 0.8222413294715225 0.9247657428116356 0.8526237954970431 0.8522724559508948 0.9309003733434738 0.9413546372696809 1.0 13.560884625789978 -9.176562563221058 0.44790061164039713 1.0040291496109324 0.8347529282121482 0.5413374170244868 0.04386660027804559 0.3826214484710529 0.18803564871050246 0.023684374918377694 0.015708555704121493 6.659435804603868e-10 9.176562563221058 -0.16927622139878418 LLS(ph)GSESSSK ddPTM_A549_MK2206_60min_R1 1 LLSGSESSSK 10 0 G3XAI9;Q5BKY9-2;Q5BKY9 G3XAI9 FAM133B Protein FAM133B 1 LLS(0.998)GS(0.002)ESSSK 91.12299999999999 0.00064758 4433100.0 3740.5 4919.8 4052.7 4793.8 5473.6 3963.3 3865.3 4019.0 7059.9 5762.7 6602.8 True False 4371.804953555135 5170.196805835179 4627.433799993183 5968.2812152018605 4668.440690834077 4382.693775374381 4567.574976746389 4588.705557671301 5460.843922343657 4460.902067631033 4963.142531990566 0.8808542018239677 1.0417183815516113 0.9323596431427207 1.2025206160678534 0.94062192668114 0.8830481387800515 0.9202989733430996 0.9245564736644608 1.1002794876723958 0.8988059558793087 1.0 12.277038171342914 -8.75804801891073 24.99989356333856 1.0473542018830926 0.9699500935004881 0.0 0.09937937634639946 135.9373276855564 1002079.8509394731 0.01568604599991031 0.017434045135671362 1.745629132177217e-09 8.75804801891073 -0.07740410838260448 LLS(ph)GSESSSK ddPTM_A549_PD325901_60min_R1 2 LLSGSESSSK 10 0 G3XAI9;Q5BKY9-2;Q5BKY9 G3XAI9 FAM133B Protein FAM133B 1 LLS(0.957)GS(0.035)ES(0.006)S(0.001)SK;LLS(0.993)GS(0.006)ESSSK 82.912 0.0010134 17120300.0 13645.599999999999 14317.8 12425.9 12705.5 15432.6 14305.1 13078.400000000001 13672.0 16208.0 14599.4 16847.5 True False 15030.89126664022 15524.411254323462 13269.196297006796 13490.289878715894 14348.667415579745 14188.60400844079 13576.10566877509 13399.301234523497 15526.834124838262 13677.5913924508 14775.364305101766 1.0172941225855407 1.0506956670410528 0.898062208349414 0.9130258719954437 0.9711210579508562 0.9602879303315469 0.9188339040877262 0.9068677399647513 1.0508596474658172 0.9257024808334562 1.0 13.850906081842897 -8.77181803318611 24.999987776853843 1.0240170567771045 0.9540197361914535 0.001626205817567672 0.05470402619004921 191.70581589476265 461777.15206671343 0.008615829020969955 0.00922004749380144 1.6911493647787994e-09 8.77181803318611 -0.069997320585651 LLS(ph)ISGKR ddPTM_A549_MK2206_60min_R1 2 LLSISGKR 8 1 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 1 LLS(1)ISGKR;LLS(0.999)IS(0.001)GKR 77.37899999999999 0.0018728999999999998 66566000.0 4173.0 4831.1 4836.299999999999 4522.0 7885.9 5880.6 5340.4 4330.9 9482.3 7798.0 8174.5 True False 4877.300379945348 5076.98235470351 5522.160062898077 5629.890203000297 6725.894556388565 6502.881188773645 6310.681552742713 4944.818337824991 7334.574190121574 6036.42638405379 6144.546045277293 0.7937608969004387 0.826258330117924 0.8987092003553976 0.9162418446400021 1.0946121172870202 1.058317594311425 1.0270378814384689 0.8047491712793959 1.1936722641632638 0.9824039627294184 1.0 12.585090713906226 -6.165093798458562 0.8116089665698302 1.0683602483961916 0.7594743079042329 0.35683554486752445 0.09797287412898587 0.6737372798194585 0.6294739734055311 0.01779396106355537 0.1413564514333864 6.83763952724003e-07 6.165093798458562 -0.3088859404919587 LLS(ph)ISGKR ddPTM_A549_PD325901_60min_R1 2 LLSISGKR 8 1 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 1 LLS(0.999)IS(0.001)GKR;LLS(0.942)IS(0.058)GKR 73.84100000000001 0.0021483 131905000.0 6138.0 6869.299999999999 6663.4 7441.5 7364.099999999999 7876.200000000001 8364.3 7302.2 7765.6 6428.7 8681.3 True False 6761.125241443224 7448.200018810449 7115.618394279293 7901.144554127293 6846.871020765826 7812.058838545786 8682.60801362058 7156.551892534916 7439.238837601432 6022.790784871196 7613.555135294856 0.8880378642166857 0.9782814843334023 0.9345986556651791 1.037773341589034 0.8993001165809068 1.026072406349395 1.1404144134150704 0.9399750530942677 0.9771044808114241 0.7910615576881806 1.0 12.894354559467159 -6.230574948027503 23.750088228157352 0.9950758698406724 0.9381035175863635 0.014027216948656052 0.08645462739962273 543.2047135688819 417992.46438100596 0.008098621554539725 0.021423341083947983 5.880646205978621e-07 6.230574948027503 -0.05697235225430897 LLS(ph)PLRDTPPPQSLMVK ddPTM_A549_PD325901_60min_R1 1 LLSPLRDTPPPQSLMVK 17 1 A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2 A0A669KBI3 AFF1 AF4/FMR2 family member 1 1 LLS(0.965)PLRDT(0.033)PPPQS(0.002)LMVK 43.476000000000006 0.014459 13513000.0 2300.7 2374.9 2635.3 2340.6 3609.9 2957.9 2969.4 3035.7 3185.9 2906.8 3539.1 True False 2534.2653703141764 2575.0411577122763 2814.147305346255 2485.1735461117164 3356.353077478929 2933.8118430886184 3082.402141918029 2975.1505820394195 3052.0077022656874 2723.264151922408 3103.813136203337 0.8165006265210135 0.8296379468456443 0.9066742042301528 0.8006840093317099 1.0813644153798851 0.9452282448541125 0.9931017128461869 0.9585469393556016 0.9833091002375809 0.8773930750398118 1.0 11.599825987938479 -6.7496652622007005 24.999999775911498 0.9909839376955222 0.8426287340247537 0.6043584943887443 0.053150384205189104 75.07266340801873 159400.8780278957 0.0052361871944135475 0.010831011231026826 1.7796505690588174e-07 6.7496652622007005 -0.1483552036707685 LLS(ph)PLSSAR ddPTM_A549_MK2206_60min_R1 2 LLSPLSSAR 9 0 A0A087WZ13;Q8IY67-2;E9PAU2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 LLS(0.999)PLS(0.001)SAR;LLS(0.762)PLS(0.225)S(0.013)AR 195.34 3.4996e-16 286870000.0 7867.4 9391.0 7733.6 7013.1 10470.0 7712.799999999999 7901.4 7751.900000000001 11260.0 11536.7 10721.4 True False 9195.224780537272 9868.961787795875 8830.340769271666 8731.309814830018 8929.876869525133 8528.963376657712 9336.982102621772 8850.755564198096 8709.627978525134 8930.551457413874 8058.980484413228 1.1409910718014071 1.2245918459392362 1.0957143755776946 1.0834261023112208 1.1080653299503944 1.0583179092136372 1.1585810538541832 1.098247548969281 1.0807357078690432 1.1081490363063096 1.0 12.976381624269738 -14.999999992431778 0.05827012564359101 0.5348420262736451 1.3170163840810936 0.16656179338960386 0.049910427553851576 135.3331688539353 0.5972655060189076 9.102221875526432 1.6944437653146143 1.0000000174264745e-15 14.999999992431778 0.7821743578074485 LLS(ph)PLSSAR ddPTM_A549_PD325901_60min_R1 4 LLSPLSSAR 9 0 A0A087WZ13;Q8IY67-2;E9PAU2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 LLS(0.999)PLS(0.001)SAR;LLS(0.997)PLS(0.003)SAR;LLS(0.983)PLS(0.017)SAR;LLS(0.999)PLS(0.001)SAR 172.56 1.4449000000000002e-07 486828900.0 7279.81 7671.9 8019.37 8349.76 9282.6 8189.540000000001 8947.65 9265.199999999999 8972.8 8689.6 9873.8 True False 8018.850952087126 8318.437937535387 8563.6126725893 8865.505711519168 8630.622199231522 8122.84710147333 9288.157717091955 9080.398317591209 8595.704419752514 8140.937173023583 8659.385195175186 0.9260300554079808 0.960626851681137 0.9889400320661045 1.023803135176251 0.9966784020695038 0.9380397012479821 1.072611681747003 1.0486192856567464 0.9926460396451524 0.9401287723705292 1.0 13.08004888382215 -5.564774118007644 1.9260536716126302 1.0029998433970857 0.9228403976787241 0.2737142032080291 0.037850049170114586 0.38914960819836775 2.2692374573508114 0.004612327622510947 0.04454584143103473 2.7241177874171884e-06 5.564774118007644 -0.08015944571836164 LLS(ph)PQQPALQR ddPTM_A549_MK2206_60min_R1 2 LLSPQQPALQR 11 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 LLS(1)PQQPALQR;LLS(1)PQQPALQR 89.301 0.00030228 43586000.0 2171.3 3372.2 2571.8 2690.5 3152.3999999999996 2985.9 2623.2 2892.1 4177.9 3357.8 4258.6 True False 2537.7623568117256 3543.8305761692295 2936.5199118667756 3349.6726207811334 2688.686135959027 3301.865956119994 3099.8014847492122 3302.0640316847894 3231.6123207353594 2599.2706479066205 3201.072088619229 0.7927851315295996 1.10707615388251 0.9173551330840015 1.0464221136069456 0.8399330166659202 1.0314875343979655 0.9683635353823914 1.0315494122811595 1.009540626162313 0.812000034971973 1.0 11.64433945161818 LLS(ph)PQQPALQR ddPTM_A549_PD325901_60min_R1 2 LLSPQQPALQR 11 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 LLS(1)PQQPALQR;LLS(1)PQQPALQR 146.16 1.9844999999999997e-11 84313000.0 4768.299999999999 5303.799999999999 5309.0 6194.0 6817.5 6390.299999999999 6431.0 5953.8 6836.299999999999 6576.2 7451.7 True False 5252.37430576307 5750.769839687716 5669.30066561047 6576.589312405352 6338.662319098198 6338.259515497211 6675.73522417823 5835.046788334255 6548.9940848736305 6160.977609698689 6535.188140218249 0.8037066711881476 0.879970050792702 0.8675038184013381 1.0063351155772113 0.9699280545711286 0.9698664184571646 1.0215062031795288 0.8928659226235204 1.0021125550418997 0.9427391342849598 1.0 12.674013054738307 -6.195112671038782 4.252475897919694 0.9906845820986218 0.8489837650205596 0.652661189804699 0.03970593809295528 0.08370099346355138 3.0006709396587152 0.005032161174637814 0.01387256658482445 6.380979200013816e-07 6.195112671038782 -0.14170081707806215 LLS(ph)PRPS(ph)LLTPTGDPR ddPTM_A549_PD325901_60min_R1 1 LLSPRPSLLTPTGDPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 2 LLS(0.998)PRPS(0.46)LLT(0.294)PT(0.248)GDPR 57.338 0.0025802 6745900.0 424.22 394.74 362.39 254.3 318.54 445.47 417.9 403.36 341.69 243.1 338.2 True False 467.28650210574204 428.00612514015063 386.983964628099 270.0075334427968 296.1668493033429 441.8422400151079 433.8034131836543 395.3146683702012 327.3299575589824 227.75062451229445 296.6035440264382 1.575458255698016 1.443024312285357 1.3047179388847916 0.9103314470805152 0.9985276820459825 1.4896728272934041 1.4625698914271454 1.3328049388882697 1.103594222494541 0.7678621145942665 1.0 8.212392025998895 -2.0000002329148385 0.03571599558653088 0.06785466763686246 3.0888694198656816 0.3683519536258628 0.20596891747142018 749.2856838850381 1.9884633274493309 48.62883112172251 143.1866173618444 0.009999994636939086 2.0000002329148385 3.0210147522288193 LLS(ph)PRPSLLTPT(ph)GDPR ddPTM_A549_PD325901_60min_R1 1 LLSPRPSLLTPTGDPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 2 LLS(0.982)PRPS(0.104)LLT(0.158)PT(0.756)GDPR 76.027 0.0002543 5184500.0 733.47 672.95 557.44 657.61 880.01 631.04 562.9 464.12 546.09 679.09 529.15 True False 807.9313344479241 729.6618582182306 595.2712305590314 698.2290761593297 818.2011334696887 625.9010194606451 584.3214675306994 454.8627625049034 523.1397363791293 636.2121415057758 464.0679045582196 1.7409765392352514 1.5723170058762186 1.2827244131992148 1.5045838535720875 1.7631064881519753 1.3487272300300241 1.259129239043062 0.9801642346671674 1.1272913537882878 1.3709462241553485 1.0 8.85819211237253 -7.792731242354067 2.0241830210096396 1.056692967674554 1.5513069096608547 0.5976195235147537 0.1620669686676632 0.11875678124839677 0.9977442239770673 0.021780169952227077 0.03274269192012446 1.6116426713233522e-08 7.792731242354067 0.4946139419863007 LLS(ph)PRPSLLTPTGDPR ddPTM_A549_MK2206_60min_R1 4 LLSPRPSLLTPTGDPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 LLS(0.993)PRPS(0.003)LLT(0.003)PT(0.002)GDPR;LLS(0.973)PRPS(0.025)LLT(0.003)PTGDPR;LLS(0.963)PRPS(0.018)LLT(0.018)PTGDPR;LLS(0.663)PRPS(0.176)LLT(0.066)PT(0.094)GDPR 128.26 1.5590000000000003e-10 217036000.0 4965.7 6206.6 5983.8 5588.8 7425.3 4808.33 4917.280000000001 4784.33 8533.7 8782.9 9029.0 True False 5803.788760291062 6522.4894294679925 6832.392817726267 6958.056250890765 6333.0482062354295 5317.144289088867 5810.686125696713 5462.523428896129 6600.830575518648 6798.836790011032 6786.850112277036 0.855152046129961 0.9610481035479435 1.0067104333668497 1.0252261558427564 0.9331351218114123 0.7834480209707957 0.8561683298685946 0.8048687297535461 0.9725911824070067 1.0017661621423335 1.0 12.728526436189183 -8.974547543506677 24.843603774391852 0.9879079527327633 0.9068895805045837 0.22496839500070476 0.07312721151479055 210.35251514822193 205322.77079724253 0.014085932732396524 0.014636841848674132 1.0603578514952669e-09 8.974547543506677 -0.08101837222817965 LLS(ph)PRPSLLTPTGDPR ddPTM_A549_PD325901_60min_R1 4 LLSPRPSLLTPTGDPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 LLS(0.999)PRPSLLTPTGDPR;LLS(0.9)PRPS(0.1)LLTPTGDPR;LLS(0.765)PRPS(0.17)LLT(0.064)PT(0.002)GDPR;LLS(0.982)PRPS(0.006)LLT(0.011)PT(0.001)GDPR 138.68 7.0802e-11 646689000.0 13138.400000000001 12119.1 11041.099999999999 11936.400000000001 14650.800000000001 14104.7 13264.5 14665.599999999999 13380.5 14269.5 15122.400000000001 True False 14472.200696021117 13140.419088985147 11790.415441527915 12673.684318468724 13621.778350516159 13989.835999598374 13769.287806112916 14373.083103059367 12818.164116942158 13368.521334751902 13262.440668791873 1.0912169982464808 0.9907994627192672 0.8890079688931004 0.9556072396456737 1.0270943856186179 1.0548462646485688 1.0382167317448376 1.083743442251996 0.9665011468895652 1.0079985779849443 1.0 13.695058676624932 -5.260522383436552 22.95948927256037 0.9931794226148895 1.091217079391668 0.18988928660958204 0.0508385218837511 29.502484603786154 738264.2816042473 0.0073011473436400895 0.06114793144006055 5.488802657168345e-06 5.260522383436552 0.09803765677677856 LLS(ph)PSNEK ddPTM_A549_MK2206_60min_R1 2 LLSPSNEK 8 0 Q14694;Q14694-3;Q14694-2;H3BNA1;J3KT19 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 LLS(0.921)PS(0.079)NEK;LLS(0.811)PS(0.189)NEK 86.898 0.002724 14729500.0 7520.3 9112.4 8807.4 7848.8 11020.699999999999 8829.4 8142.0 9135.8 12528.3 12447.7 12644.1 True False 8789.542786317515 9576.182237792687 10056.421755881256 9771.756352346025 9399.569629033007 9763.721247518628 9621.29600824493 10430.8276272141 9690.660053584053 9635.755924696896 9504.221010592768 0.9248041240330249 1.0075715018747686 1.0581005791714062 1.0281491077969547 0.9889889574912953 1.0273036829253694 1.0123182107741053 1.0974942202615656 1.0196164465013484 1.013839631249897 1.0 13.214352669535916 -5.276490555847409 4.371554738234756 1.0194274615613355 0.9191606402553504 0.4950559650269577 0.02881937435315999 0.12984512178109828 5.860031248995986 0.004056111089277724 0.039081844131717676 5.2906550212436586e-06 5.276490555847409 -0.10026682130598508 LLS(ph)PSNEK ddPTM_A549_PD325901_60min_R1 1 LLSPSNEK 8 0 Q14694;Q14694-3;Q14694-2;H3BNA1;J3KT19 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 LLS(0.867)PS(0.133)NEK 76.619 0.004619300000000001 19978000.0 7442.4 8103.6 8190.0 8507.4 9112.4 8284.6 7489.2 8617.8 8053.1 8871.2 9760.1 True False 8197.946969194692 8786.518811586677 8745.822650470842 9032.882776292756 8472.376460073403 8217.13296435038 7774.205604247493 8445.911218466681 7714.656212409622 8311.070918031535 8559.669574371497 0.9577410550683126 1.026502102124875 1.0217476941699601 1.0552840501388168 0.9898018126120828 0.9599824961647228 0.9082366482374785 0.9867099594305112 0.9012796750365306 0.9709569798016163 1.0 13.063339390562282 -7.132857891821356 3.41384869923933 0.9516774884870378 1.0169777039222678 0.39251324716412006 0.035202232500838614 0.22487859306242075 4.861595741454213 0.006336114925881514 0.011446801024280627 7.364480357815598e-08 7.132857891821356 0.06530021543523001 LLS(ph)REAPEELK ddPTM_A549_MK2206_60min_R1 2 LLSREAPEELK 11 1 A0A3B3IS46;A0A3B3IRX3;Q71F56 A0A3B3IS46 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 LLS(1)REAPEELK;LLS(1)REAPEELK 83.69200000000001 0.0001631 22035000.0 3279.8 3020.0 2414.2 2208.4 2412.8999999999996 2018.04 1991.5099999999998 1877.77 2640.1000000000004 3100.6 2836.6000000000004 True False 3833.350056588728 3173.705100537063 2756.569862053334 2749.458099138843 2057.965606349302 2231.5876533334645 2353.3415884770147 2143.9496479294435 2042.121565373377 2400.172306539778 2132.1939338226885 1.7978430553529126 1.4884692476575565 1.2928326163611383 1.289497196068604 0.9651868780339757 1.046615703165696 1.1037183584224177 1.0055134356778133 0.9577560150507389 1.1256819881466629 1.0 11.058122949138083 -4.421544815658351 0.4954070393627269 0.9801384441843871 3.3615305301037233 0.9108799299789839 0.07453791874458984 1.2305416203674853 0.11005394224322582 0.011252182560121818 2.0593339077061943 3.788394385824162e-05 4.421544815658351 2.381392085919336 up LLS(ph)REAPEELK ddPTM_A549_PD325901_60min_R1 2 LLSREAPEELK 11 1 A0A3B3IS46;A0A3B3IRX3;Q71F56 A0A3B3IS46 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 LLS(1)REAPEELK;LLS(1)REAPEELK 109.84 2.6373000000000003e-05 13558600.0 2737.8 3304.0 2890.4 3453.6000000000004 3638.9 3103.3 3347.5 3921.5 4693.7 5736.4 5614.6 True False 3015.739440538163 3582.4396753890105 3086.5599253871715 3666.921028305319 3383.316217523498 3078.027753695838 3474.8909443222865 3843.282606142763 4496.440111781427 5374.202725019852 4924.039793881849 0.6124522885223711 0.7275407643618589 0.626834886513761 0.7446976835689858 0.6871017211776579 0.625102128037289 0.7056992002054616 0.7805141239756158 0.9131607988563136 1.0914214648909486 1.0 12.265626705746037 -8.688268645211458 1.3153229939711704 0.9709930280362167 0.67270191404824 0.8704842971364423 0.05494442737176327 0.0792706400108505 0.26831351436706874 0.008436909853780455 0.009262021079539091 2.0498937664321387e-09 8.688268645211458 -0.2982911139879767 LLS(ph)SEDR ddPTM_A549_MK2206_60min_R1 1 LLSSEDR 7 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 LLS(0.5)S(0.5)EDR 73.248 0.019153 1527300.0 699.84 757.97 551.96 428.99 899.82 869.03 445.05 748.94 915.83 753.1 946.69 True False 817.9558825547457 796.5474354483698 630.2362277603177 534.092569258093 767.4576699843466 960.9901777845727 525.9098241794895 855.104538532556 708.3959672799892 582.9741869493345 711.6007456851867 1.1494590014336645 1.119374087616209 0.8856598754031312 0.7505508847434182 1.0784947523423072 1.350462578365139 0.7390518171437568 1.2016633536677823 0.9954963813281117 0.8192433615116576 1.0 9.47492421217822 -5.58532565342315 11.52202104527554 1.0009552210732011 1.1419548434864322 0.09290598420402929 0.17739197324678888 0.9299729743893627 168.08826910764932 0.021404564054695856 0.08300045825881504 2.5982105780612545e-06 5.58532565342315 0.14099962241323105 LLS(ph)SNEDDANILS(ph)SPTDR ddPTM_A549_PD325901_60min_R1 1 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 2 LLS(0.846)S(0.154)NEDDANILS(0.492)S(0.441)PT(0.067)DR 56.528999999999996 0.0097524 3341900.0 1008.5 952.63 819.49 1266.2 1046.5 1149.7 1056.2 733.68 1229.3 1312.6 1155.0 True False 1110.8821775815402 1032.911473355276 875.1055193936942 1344.4102982511565 972.997450229008 1140.3372243818196 1096.394268974817 719.0461768391741 1177.636796005904 1229.7222119902824 1012.9423221482443 1.0966884819518503 1.0197140061881127 0.8639243323724234 1.327232823483904 0.9605655020568976 1.1257671828376137 1.0823856847540816 0.7098589535820989 1.1625901793780087 1.2140101021569443 1.0 9.984336312779694 -9.030979058116188 0.0050562738087565045 0.9875807879506415 1.117408635630259 0.0 0.16164642821937156 450767.45260000415 1536.9720482659634 19825.089137573555 19633.374980275203 9.311527750092567e-10 9.030979058116188 0.12982784767961753 LLS(ph)SNEDDANILSSPTDR ddPTM_A549_MK2206_60min_R1 1 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLS(0.855)S(0.145)NEDDANILSSPTDR 235.7 2.826e-74 6482500.0 2018.2 1638.7 1830.6 1075.2 2075.7 1223.0 1145.2 1397.1 1976.2 1512.9 2104.7 True False 2358.8228197473536 1722.1028305463847 2090.206606525903 1338.6240482675623 1770.3672796631638 1352.4170482383038 1353.268016291095 1595.1432034393063 1528.593855342929 1171.1348392453174 1582.0449032350743 1.4909961246509946 1.0885296789142396 1.3212056132235594 0.8461353059766203 1.1190373143284333 0.8548537689877123 0.8553916602011986 1.008279347935983 0.9662139501964546 0.740266497398715 1.0 10.627574833117041 -4.396241919969957 0.6948950681153561 0.9691569077866351 2.745297963880004 0.5909014713088987 0.13539174783374702 3.6095066886041987 0.5092753916401254 0.01692244029349703 6.704295052510884 4.0156705909197124e-05 4.396241919969957 1.776141056093369 LLS(ph)SNEDDANILSSPTDR ddPTM_A549_PD325901_60min_R1 2 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLS(0.635)S(0.365)NEDDANILSSPTDR;LLS(0.979)S(0.021)NEDDANILSSPTDR 202.6 7.5171e-49 15638600.0 5061.7 6527.7 6462.1 5832.9 6980.0 5766.7 6513.6 6620.2 6122.7 7042.2 7429.8 True False 5575.560057773405 7077.812187965143 6900.6569657640575 6193.184985522961 6489.7488796927655 5719.737907143292 6761.478612378681 6488.154917553569 5865.384211262788 6597.5542901706285 6515.981701382704 0.8556746033510592 1.0862234598453855 1.0590356575586646 0.9504607700492399 0.9959740799019783 0.8778014072583342 1.0376761203831928 0.9957294564189414 0.9001535731781048 1.0125188486595373 1.0 12.66976683705813 -6.303538004534361 24.82911229152117 0.958622690576197 1.00890253416654 0.005945675959938002 0.07111217301552004 802.4497279675777 473271.1833683763 0.009693323783864642 0.022525505897264167 4.971208694335253e-07 6.303538004534361 0.0502798435903431 LLSAEK ddPTM_A549_PD325901_60min_R1 1 LLSAEK 6 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4;REV__Q8NB16 PLEC Plectin 0 74.415 0.036959 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LLSAER ddPTM_A549_PD325901_60min_R1 2 LLSAER 6 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;A0A075B730;P58107;Q15149-3;Q15149-2;H0YDN1;Q15149-4;P15924-2;P15924-3;P15924 Q15149;Q15149-3;Q15149-4;P15924-2 PLEC;EPPK1;DSP Plectin;Epiplakin;Desmoplakin 0 ; 121.14 0.046498000000000005 19794100.0 5182.700000000001 5166.3 5017.9 4594.0 6372.0 5853.700000000001 5565.200000000001 5440.9 5449.2 5568.6 5806.200000000001 False True 5708.843888697911 5601.682232131424 5358.444869083961 4877.760946269005 5924.4527022066295 5806.02940798805 5776.986731394295 5332.376981196519 5220.189074103448 5216.997645656782 5092.074208534321 1.1211234665688656 1.100078671819629 1.0523108363391882 0.9579123843273677 1.1634655072931266 1.1402091113002908 1.1345056051445717 1.0471915299779904 1.025159661922131 1.024532917629733 1.0 12.314037728941488 -8.578510213270432 3.06529712798665 1.0116289423667497 1.093191625337133 0.30603102957297157 0.05251746552811855 0.23090659944615896 4.419131378624095 0.009521327457131981 0.010961644754179335 2.6393062532706714e-09 8.578510213270432 0.08156268297038327 LLSDPELS(ph)ATESPLADK ddPTM_A549_MK2206_60min_R1 1 LLSDPELSATESPLADK 17 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(0.002)DPELS(0.354)AT(0.322)ES(0.322)PLADK 45.33 0.040027 986560.0 427.64 989.6 628.88 606.77 965.33 549.71 646.65 612.7 1188.0 902.19 996.69 True False 499.815177205806 1039.9664130766473 718.0646403976888 755.4286772389403 823.3312357649186 607.8799473320339 764.1379346268217 699.5521013150548 918.9198968461694 698.3846524018326 749.1843657553889 0.6671457655177461 1.388131494212467 0.9584618596167278 1.0083348128564529 1.098970124576437 0.8113889919727832 1.019959798355316 0.9337516014628912 1.2265604287132172 0.9321933082488503 1.0 9.549176982998883 -8.741986813638668 24.949440300855702 1.1069868974278485 0.9981226907476427 0.0 0.18322537491676705 481.68949888529255 617804.1225782767 0.02890530151887708 0.03275142195916918 1.8113950906648493e-09 8.741986813638668 -0.1088642066802058 LLSDPELS(ph)ATESPLADK ddPTM_A549_PD325901_60min_R1 1 LLSDPELSATESPLADK 17 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLS(0.046)DPELS(0.945)AT(0.009)ESPLADK 121.08 8.0509e-10 6734000.0 2960.3 2349.6 3259.6 3284.7 4003.1 2946.2 3075.8 3729.9 3660.8 3892.0 3937.3 True False 3260.827476742322 2547.609037921918 3480.8160575671272 3487.58845890505 3721.9360659452873 2922.2071240094956 3192.8512521423418 3655.504218450055 3506.949306774923 3646.2584557871264 3453.037060601109 0.9443360785055325 0.7377879221135343 1.0080448012802916 1.010006089624166 1.077873188333915 0.8462715785334763 0.9246501546631319 1.0586345163100277 1.0156129937871068 1.0559569421917474 1.0 11.753650103029033 -5.785422034728824 24.996738579914076 0.9995818603707044 0.8410619936968128 0.39262604080006736 0.07608741989366895 133.34649837217555 138985.0688097696 0.009573552779896482 0.02978724964936783 1.638996270224894e-06 5.785422034728824 -0.15851986667389162 LLSDPELSATES(ph)PLADKK ddPTM_A549_MK2206_60min_R1 1 LLSDPELSATESPLADKK 18 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLSDPELS(0.001)AT(0.022)ES(0.977)PLADKK 96.016 1.1792999999999998e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LLSDPELSATES(ph)PLADKK ddPTM_A549_PD325901_60min_R1 1 LLSDPELSATESPLADKK 18 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 LLSDPELS(0.006)AT(0.026)ES(0.968)PLADKK 111.13 5.450100000000001e-15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LLSGDST(ph)EK ddPTM_A549_MK2206_60min_R1 1 LLSGDSTEK 9 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LLS(0.143)GDS(0.195)T(0.663)EK 128.28 5.437e-05 11422000.0 4039.8 4816.0 3901.1 4119.9 4567.6 4257.6 4080.3 5030.6 5845.4 4989.0 4908.3 True False 4721.6194763726835 5061.113829200822 4454.334640401072 5129.275684949338 3895.7120906631303 4708.136406033852 4821.637693741315 5743.7029555663685 4521.426233185686 3861.981434989018 3689.4336478114274 1.2797680964322393 1.3717861092861978 1.2073220623017258 1.3902609924946137 1.0559105983581158 1.2761135869259281 1.3068774652178692 1.5567980085435427 1.2255068568228071 1.046768096040959 1.0 11.849183654822093 -9.988259607392083 0.9516680164781652 1.025705621280678 1.2963507076974823 0.4325175601562429 0.11959141324511904 0.3273193898204226 0.6006672165161413 0.045313399724497626 0.023456367248276832 1.0274019663980751e-10 9.988259607392083 0.2706450864168042 LLSGPSQES(ph)PQTLGK ddPTM_A549_MK2206_60min_R1 1 LLSGPSQESPQTLGK 15 0 E7EVL6;C9JZE3;C9JYJ8;Q9BWE0;Q9BWE0-4 E7EVL6 REPIN1 Replication initiator 1 1 LLSGPS(0.136)QES(0.774)PQT(0.09)LGK 102.28 6.6763e-06 3133600.0 1552.1 1850.6 1998.9 1583.5 2185.4 1944.1 1780.1 1383.1 2081.5 2289.3 2284.9 True False 1814.056534798269 1944.7876354483062 2282.3740772340375 1971.4575710860163 1863.9305549818744 2149.823371610864 2103.5211280123785 1579.1586605661041 1610.043573472475 1772.1455400120997 1717.4962699680823 1.0562215281154474 1.1323387825956954 1.3288960896994861 1.147867163124991 1.085260322001464 1.2517193831523232 1.2247602308047343 0.9194539098448528 0.9374364309404851 1.0318191491880404 1.0 10.74609125048602 -8.261510883945297 24.99999980974852 0.9658054353953478 1.1779720118389554 0.6161414222512919 0.0770440105809076 3.0648091755625746 1071481.3346632135 0.012330095105351395 0.015395948207245255 5.476323764598233e-09 8.261510883945297 0.2121665764436076 LLSGPSQES(ph)PQTLGK ddPTM_A549_PD325901_60min_R1 2 LLSGPSQESPQTLGK 15 0 E7EVL6;C9JZE3;C9JYJ8;Q9BWE0;Q9BWE0-4 E7EVL6 REPIN1 Replication initiator 1 1 LLSGPS(0.003)QES(0.996)PQTLGK;LLSGPSQES(0.999)PQT(0.001)LGK 194.77 2.3393e-38 8049900.0 5643.3 5281.1 5251.9 4829.5 7435.6 6129.1 5804.4 5859.799999999999 6525.7 5420.799999999999 5927.4 True False 6216.203661622111 5726.156831022061 5608.325516240272 5127.807246409696 6913.349107427439 6079.186641696628 6025.289618289555 5742.921692075828 6251.447522733043 5078.529762880486 5198.367376884422 1.195799221360095 1.1015298488684275 1.0788628639789506 0.986426482516706 1.3299077587646124 1.169441519029406 1.1590734516152528 1.1047548731574601 1.2025790155831142 0.976947067162506 1.0 12.343842879626573 -10.918857076888255 1.125505397074798 0.9984583266220685 1.1493721399798735 0.3515634322188883 0.08253184025977056 0.5082247834326604 1.1242139670267821 0.060882279386670846 0.013801329023772338 1.2054325740755338e-11 10.918857076888255 0.15091381335780507 LLSIS(ph)GKR ddPTM_A549_MK2206_60min_R1 1 LLSISGKR 8 1 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 1 LLS(0.006)IS(0.994)GKR 50.108000000000004 0.013378 37730000.0 1538.1 1661.2 1462.5 1279.8 1791.3 1725.2 1628.5 1561.5 1568.2 1868.8 1771.8 True False 1797.6936770654058 1745.747984441115 1669.904491447686 1593.3510574524046 1527.802142920762 1907.7595189049223 1924.3773703545655 1782.8474068931905 1213.0052039008094 1446.6367820620312 1331.8131608076699 1.3498092149616585 1.3108054761843748 1.2538579288666758 1.1963773180362076 1.1471595174763372 1.4324528207454965 1.4449304354279986 1.3386618028402675 0.9107923240262845 1.0862160133518484 1.0 10.379175986528493 -8.759910986744297 24.999992452613625 0.9578741395033231 1.3069249244866292 0.6749238353342162 0.09471918780310278 14.72575905276302 240869.34075696865 0.016514570165342787 0.018242575471068685 1.7381570459463745e-09 8.759910986744297 0.3490507849833061 LLSIS(ph)GKR ddPTM_A549_PD325901_60min_R1 1 LLSISGKR 8 1 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 1 LLS(0.003)IS(0.997)GKR 70.056 0.0028342 99004000.0 2573.4 2448.8 2311.4 2331.9 2816.8 2522.0 2576.3 2677.9 2590.6 2130.1 2685.2 True False 2834.6496735630485 2655.168970064346 2468.265503577328 2475.9361668708502 2618.957685432461 2501.4616681664347 2674.3425063054533 2624.4871837280884 2481.726091054172 1995.6051224748596 2354.9374228852525 1.2037048823531182 1.1274902442253654 1.048123605999359 1.0513808744171855 1.1121134939644097 1.0622200164884474 1.1356320895477843 1.1144615386478447 1.0538395062802046 0.8474132276643931 1.0 11.201473008664648 -14.999999886977688 0.04335994529771395 0.5199653279202978 1.3564460646691328 0.5023894906218282 0.06194193920088841 308.9181749407219 1.0273341872249226 18.40583072383875 5.214401736145742 1.0000002602435236e-15 14.999999886977688 0.8364807367488349 LLSISGK ddPTM_A549_MK2206_60min_R1 2 LLSISGK 7 0 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 0 ; 100.45 0.031091000000000004 20372500.0 8397.8 8741.3 9456.6 8280.2 11676.4 9443.9 8789.0 8728.2 12793.8 11925.1 10943.5 False True 9815.143333502288 9186.194832888945 10797.688077828494 10308.84937171231 9958.817027633548 10443.247229646538 10385.847533341283 9965.449078991453 9896.02472750044 9231.211627658357 8225.926924765066 1.1931960280309213 1.1167367418780352 1.3126408946474901 1.2532143144472112 1.2106619860251158 1.269552638281527 1.2625747381822146 1.211468223597922 1.203028524081263 1.122209291680767 1.0 13.005962540338539 -10.383871829168235 0.6242858609702762 0.9876824429539935 1.2319893949741823 0.5065324955437486 0.05891636385534168 0.3350343132336544 0.22395532942424012 0.04259059861219292 0.010816366505880446 4.131694203126286e-11 10.383871829168235 0.2443069520201887 LLSISGK ddPTM_A549_PD325901_60min_R1 2 LLSISGK 7 0 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 0 ; 113.7 0.020704 35159000.0 15555.3 15900.0 17097.4 15716.7 19880.9 16826.8 16913.8 18672.1 17709.9 17608.800000000003 20026.0 False True 17134.462604793385 17239.948801054852 18257.73237901835 16687.48486378451 18484.53416938165 16689.76811970777 17557.463914586497 18299.670317520915 16965.61449083621 16496.97736286339 17562.928955273383 0.975603935336119 0.9816101200977896 1.0395607945300234 0.9501538670617913 1.0524744600661584 0.950283871341207 0.9996888309062342 1.0419486615315563 0.9659900426655302 0.9393067298100107 1.0 14.100245841557076 LLSKDDT(ph)SPPKDK ddPTM_A549_MK2206_60min_R1 2 LLSKDDTSPPKDK 13 2 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LLS(0.008)KDDT(0.496)S(0.496)PPKDK;LLS(0.008)KDDT(0.496)S(0.496)PPKDK 52.254 0.0084486 47636000.0 5699.5 6188.6 6494.9 5718.0 8375.8 5838.1 6321.3 6318.6 8644.2 8149.5 7722.900000000001 True False 6661.436260603528 6503.573306352203 7415.9744830793625 7118.910256690779 7143.730915355171 6455.88386698286 7469.798385767458 7214.28089990094 6686.302501950891 6308.522289926439 5805.090788803232 1.14751629267401 1.1203224106152128 1.2774950044507793 1.2263219501100002 1.2305976211662164 1.112107304064024 1.286766849568501 1.242750744538868 1.1517998159214542 1.0867224164855815 1.0 12.503102914979793 -9.981194856174726 0.735811309069632 1.0084928587458872 1.2052819481547186 0.4796705308767215 0.06144054371237292 0.29987977439672736 0.32823696235655253 0.02887663906978742 0.012541778712204122 1.0442515866853402e-10 9.981194856174726 0.19678908940883133 LLSKDDTS(ph)PPKDK ddPTM_A549_PD325901_60min_R1 2 LLSKDDTSPPKDK 13 2 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LLS(0.197)KDDT(0.276)S(0.527)PPKDK;LLS(0.005)KDDT(0.153)S(0.842)PPKDK 64.565 0.0012139000000000002 81332000.0 7294.1 8729.0 7285.7 7715.700000000001 9882.8 10232.8 8741.599999999999 8870.8 9440.7 9435.2 8472.4 True False 8034.591662367385 9464.623464428165 7780.1514144731955 8192.281265373911 9188.666221809124 10149.467469474028 9074.266371587064 8693.864934992025 9043.940209918595 8839.459861778696 7430.348510968646 1.0813209704103055 1.2737792110903723 1.0470775903698422 1.1025433400977764 1.2366400052763147 1.3659477014424601 1.2212437085813235 1.1700480700411537 1.2171623170256378 1.1896426996297584 1.0 12.859214164773805 -10.707262462418214 0.8669861647336422 0.9946725870002125 1.1940979380101964 0.0 0.10244876206241635 0.5315123981952146 0.6796974368266055 0.06956073710700376 0.016315086341904997 1.9621740941243632e-11 10.707262462418214 0.19942535100998382 LLSMPGAQGAAAAGSEPPPAT(ph)TSPEGQPK ddPTM_A549_MK2206_60min_R1 1 LLSMPGAQGAAAAGSEPPPATTSPEGQPK 29 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LLSMPGAQGAAAAGSEPPPAT(0.385)T(0.33)S(0.284)PEGQPK 55.702 0.0012190999999999999 1432700.0 795.25 592.4 866.33 994.45 1001.6 941.69 734.1 878.2 1256.2 814.75 1109.9 True False 929.4687580042031 622.5506296550183 989.1886209065798 1238.0902946425565 854.2659668114973 1041.339010756768 867.4764676556864 1002.6875393747048 971.6727057391903 630.6974091315501 834.2811983183395 1.114095295300593 0.7462119857308225 1.1856777102258653 1.4840203724333891 1.0239544754615602 1.2481870775175024 1.0397890656103226 1.2018580083020232 1.1646824927827581 0.7559770139886249 1.0 9.704389922417038 -5.787380803595144 24.991351518366532 1.1252092429892202 0.9301532788729473 0.13383473315304018 0.1888209121750081 232.01317089903156 223516.03567590477 0.021257329463878122 0.06612219864298043 1.6316206621665262e-06 5.787380803595144 -0.1950559641162729 LLSMPGAQGAAAAGSEPPPAT(ph)TSPEGQPK ddPTM_A549_PD325901_60min_R1 1 LLSMPGAQGAAAAGSEPPPATTSPEGQPK 29 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LLSMPGAQGAAAAGS(0.002)EPPPAT(0.356)T(0.356)S(0.287)PEGQPK 75.53399999999999 9.2789e-06 5866100.0 1290.1 1745.6 1493.8 1373.8 1938.8 1707.6 1795.4 1819.9 1657.1 1812.4 1749.1 True False 1421.0700022785754 1892.7078381837327 1595.1782509491275 1458.6565058738254 1802.6253764968958 1693.6938717529763 1863.7249294805774 1783.6006668160683 1587.4578497204775 1697.96475469388 1533.9717884584365 0.9263990465604836 1.2338609174069672 1.0399006441651708 0.9509017811466408 1.175135938000817 1.1041232208416638 1.2149668875941493 1.1627336827416468 1.0348676955237825 1.1069074199860272 1.0 10.583056234891869 -8.927672099231748 6.7784355162941585 1.0151803474209165 1.104768197355797 0.0318089345109116 0.09792707693062681 0.28681037595135633 21.460284316133546 0.015821550228240833 0.016728386037194797 1.1812121371627328e-09 8.927672099231748 0.08958784993488056 LLSMPGAQGAAAAGSEPPPATT(ph)SPEGQPK ddPTM_A549_MK2206_60min_R1 1 LLSMPGAQGAAAAGSEPPPATTSPEGQPK 29 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LLSMPGAQGAAAAGSEPPPAT(0.122)T(0.488)S(0.39)PEGQPK 81.566 4.3071e-06 2627700.0 550.45 1008.9 1143.0 903.05 1146.2 749.06 840.32 936.23 1650.6 1239.5 1285.1 True False 643.3525027895801 1060.248700639682 1305.0945871621905 1124.2972905394552 977.5954983619592 828.3250320142135 992.9952667217368 1068.9434695841262 1276.741735466571 959.4960891298639 965.9742030443265 0.6660141655564046 1.0975952538879856 1.3510656734404558 1.1638999126437992 1.0120306476932899 0.8575022287383005 1.0279728626212292 1.106596290268711 1.3217141114564361 0.9932936988440826 1.0 9.91584085126127 -8.51745606818461 24.14526442737137 1.1551960484498227 1.0408894530120205 0.018946729751478708 0.18284242655969718 356.4029320321666 1586941.7831595743 0.033467964844317015 0.03853164491110265 3.0376933595719234e-09 8.51745606818461 -0.1143065954378022 LLSMPGAQGAAAAGSEPPPATT(ph)SPEGQPK ddPTM_A549_PD325901_60min_R1 1 LLSMPGAQGAAAAGSEPPPATTSPEGQPK 29 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LLSMPGAQGAAAAGS(0.004)EPPPAT(0.101)T(0.487)S(0.407)PEGQPK 77.825 7.3904e-06 4980800.0 1331.3 1259.7 1750.8 1613.3 1334.5 2185.3 1654.8 1737.9 1400.9 1373.8 1792.6 True False 1466.4525959487387 1365.859339917535 1869.6198164156735 1712.9498769298602 1240.7693237750714 2167.503641333905 1717.7743195413047 1703.2362211438256 1342.0250447609787 1287.0580335458249 1572.1215642276568 0.9327857522704801 0.8688000794573076 1.1892336184156154 1.089578513460178 0.7892324308805151 1.378712493139005 1.0926472600006625 1.0833998209168907 0.8536394864733513 0.8186758981186825 1.0 10.618497062899564 -8.746767135217596 24.98260598481952 0.9308853095127431 1.05604582095726 0.16301634267138754 0.15662440667375177 375.84807006933414 639960.6152526231 0.02603029228862243 0.029453084465117196 1.7915662181832473e-09 8.746767135217596 0.125160511444517 LLSMPGAQGAAAAGSEPPPATTS(ph)PEGQPK ddPTM_A549_MK2206_60min_R1 2 LLSMPGAQGAAAAGSEPPPATTSPEGQPK 29 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LLSMPGAQGAAAAGS(0.012)EPPPAT(0.223)T(0.223)S(0.542)PEGQPK;LLSMPGAQGAAAAGS(0.097)EPPPAT(0.156)T(0.179)S(0.569)PEGQPK 66.58 0.00016596 2508900.0 533.32 696.88 1107.5 709.52 1039.2 577.12 1019.8 683.34 906.92 1142.0 1297.3 True False 623.3313775778704 732.3482153848565 1264.5601533526922 883.3524318515636 886.3350566199158 638.1904553387485 1205.0844594949863 780.2055376409822 701.5040680536429 884.0214068465548 975.1446063414556 0.6392194280974214 0.7510149885692115 1.2967924399408461 0.9058681411013719 0.9089267897868654 0.6544572478671746 1.2358007742218031 0.8000921428137256 0.719384656892626 0.906554167553901 1.0 9.929472364926577 LLSMPGAQGAAAAGSEPPPATTS(ph)PEGQPK ddPTM_A549_PD325901_60min_R1 2 LLSMPGAQGAAAAGSEPPPATTSPEGQPK 29 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LLSMPGAQGAAAAGS(0.001)EPPPAT(0.047)T(0.181)S(0.771)PEGQPK;LLSMPGAQGAAAAGSEPPPAT(0.099)T(0.29)S(0.61)PEGQPK 101.07 5.8998e-15 13503000.0 2904.1 2400.12 2542.0 2371.9 2912.1000000000004 2275.7 2494.7 3096.8 2558.5 2657.5 3132.2 True False 3198.922094114574 2602.3865356218735 2714.5154062877764 2518.406876024258 2707.564142199615 2257.1674537059293 2589.63717365222 3035.0318946073994 2450.975142423414 2489.704996468213 2746.959256651714 1.164532049890598 0.9473699070418463 0.9881891767104388 0.9167980449385915 0.9856586462443139 0.8216967354867888 0.9427286434560174 1.1048696435005807 0.8922502714550354 0.9063494445501642 1.0 11.4236197969461 -5.260625592165299 24.395037246454784 0.9522246567466173 1.1645321371389954 0.4438600516527976 0.06882259306626912 34.29161733455941 1027695.715015623 0.009292606875072194 0.07767271124420681 5.487498415321035e-06 5.260625592165299 0.21230748039237812 LLSPQMS(ph)GEEEDSDLAAK ddPTM_A549_PD325901_60min_R1 3 LLSPQMSGEEEDSDLAAK 18 0 P42858;A0A3B3IU44 P42858 HTT Huntingtin 1 LLS(0.001)PQMS(0.999)GEEEDSDLAAK;LLS(0.043)PQMS(0.94)GEEEDS(0.017)DLAAK;LLS(0.003)PQMS(0.997)GEEEDSDLAAK 111.06 2.0962e-09 10945700.0 3987.6000000000004 5147.7 4974.2 5570.900000000001 6065.2 5280.9 5113.0 5698.299999999999 5309.0 5985.1 5756.6 True False 4392.418216484035 5581.514744854719 5311.779124294518 5915.001840568134 5639.201275804088 5237.894101276816 5307.578012940959 5584.642936270126 5085.881192544818 5607.199764576446 5048.57469409401 0.8700313420384631 1.1055624771451158 1.0521344034997469 1.171618169280074 1.1169887775258656 1.0374995753562444 1.051302265399765 1.106182095870192 1.007389511042483 1.1106500555762668 1.0 12.301660430546683 -8.839394140339866 8.759165419515584 1.0033404695578225 1.068928218827207 0.0 0.07877622852701727 0.3877669526718029 39.56304483641319 0.011894773057484095 0.012648610191384389 1.4474576291626174e-09 8.839394140339866 0.06558774926938438 LLSPRPSLLT(ph)PTGDPR ddPTM_A549_MK2206_60min_R1 1 LLSPRPSLLTPTGDPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 LLS(0.061)PRPS(0.153)LLT(0.764)PT(0.022)GDPR 108.49 2.5051e-07 197590000.0 1732.6 1844.2 1675.6 1846.7 2511.5 1771.7 1643.3 1512.9 2852.2 2338.3 2917.8 True False 2025.0205219969591 1938.061902784917 1913.2252758083691 2299.141582901513 2142.0616769639314 1959.1801180407222 1941.8663387802624 1727.3582080619342 2206.1812540274773 1810.0764059801218 2193.2297328166946 0.9233052478256759 0.8836565881750683 0.8723323631725871 1.0482903585064933 0.9766699971794337 0.8932854086035985 0.8853912153955644 0.7875865360641192 1.0059052278094687 0.8253017816129543 1.0 11.098841221633236 -8.895285881206672 21.13977590009994 1.002817006467891 0.9113902647111579 0.0 0.08163315428949507 3.298141789899439 654.182812708194 0.011070311506347867 0.011785125307544893 1.2726650533388012e-09 8.895285881206672 -0.09142674175673304 LLSPRPSLLTPT(ph)GDPR ddPTM_A549_MK2206_60min_R1 1 LLSPRPSLLTPTGDPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 LLS(0.102)PRPS(0.222)LLT(0.06)PT(0.616)GDPR 78.234 0.00015146 15931000.0 1757.8 2200.7 2040.4 1880.3 2389.3 1787.0 2037.6 1483.0 3132.7 3063.7 2098.3 True False 2054.4736659161113 2312.7062300503007 2329.7594012648597 2340.9735844098745 2037.8371350865723 1976.0991538854034 2407.805544878392 1693.2197914970238 2423.148451893934 2371.608042167939 1577.2341998660893 1.3025799631345432 1.4663048964108532 1.4771169693522126 1.4842269997750672 1.292032049051174 1.252888856996113 1.5265998829361043 1.0735373298656483 1.5363276120310254 1.5036498969964598 1.0 10.623181183153672 -10.946223689164713 1.097118578015239 0.990539416455758 1.3910370449151248 0.0 0.19920974406179875 0.32897370626562106 0.6753989268814712 0.10491342308394712 0.022200610569291592 1.131817255508229e-11 10.946223689164713 0.40049762845936676 LLSPS(ph)NEK ddPTM_A549_MK2206_60min_R1 1 LLSPSNEK 8 0 Q14694;Q14694-3;Q14694-2;H3BNA1;J3KT19 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 LLS(0.29)PS(0.71)NEK 81.263 0.0037549 8709600.0 5172.2 5725.3 5921.1 5720.3 7887.4 6314.3 5243.5 6168.9 8325.3 8420.3 8206.4 True False 6045.140911850789 6016.6933152665 6760.801014913428 7121.773756794021 6727.173908375598 6982.475034906881 6196.176077036634 7043.360466463915 6439.63284277223 6518.148381847672 6168.524394882079 0.9799978933156754 0.9753861588451281 1.0960159321932408 1.1545344236139905 1.0905645301422529 1.1319522446405696 1.0044827061359272 1.1418225843943606 1.0439502919231518 1.0566787070268653 1.0 12.5907097006507 -9.575444254080162 1.1644176490448503 1.0092209135079855 1.0723875998180883 0.0440974110300727 0.06150368926278411 0.5652019962713101 1.5811806117974634 0.01660182104507092 0.01208210778528915 2.658004708409112e-10 9.575444254080162 0.0631666863101028 LLSRPQDALEGVVLS(ph)PSLEAR ddPTM_A549_PD325901_60min_R1 1 LLSRPQDALEGVVLSPSLEAR 21 1 Q9NVI7-3;Q9NVI7-2;Q9NVI7 Q9NVI7-3 ATAD3A ATPase family AAA domain-containing protein 3A 1 LLSRPQDALEGVVLS(0.951)PS(0.049)LEAR 61.602 0.00052283 3422400.0 1323.4 1044.7 1053.0 975.1 1608.1 1265.0 1074.0 1156.8 1467.3 1123.2 1507.7 True False 1457.7505937644112 1132.7405353749693 1124.4629122033946 1035.329712387224 1495.1526036438304 1254.698259409413 1114.8716577153505 1133.7267165079556 1405.6344836731987 1052.2809603134895 1322.2624580977551 1.1024669004530108 0.8566684537081711 0.8504082569364325 0.7829986445177299 1.1307532740472719 0.9489025811217978 0.8431545877202299 0.8574142822892874 1.0630525544039002 0.795818525943277 1.0 10.368792852895321 -8.769987470545372 24.98477532715797 1.0297748208306772 0.9177062231701997 0.0 0.12534392908263672 219.8452851004916 642572.6156871191 0.01781652405293476 0.019112324904704544 1.6982926477279013e-09 8.769987470545372 -0.1120685976604775 LLSS(ph)EDR ddPTM_A549_MK2206_60min_R1 1 LLSSEDR 7 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 LLS(0.012)S(0.988)EDR 96.492 0.011762 1590400.0 582.83 538.53 633.24 547.99 765.29 619.65 539.1 560.23 710.81 797.02 758.67 True False 681.1974551745859 565.9388767523916 723.0429539585181 682.2475746002062 652.7168547735331 685.2209517096194 637.0474917765711 639.6443181324195 549.8126699303245 616.9726284455696 570.2713007731999 1.1945147059846555 0.9924028720804744 1.2678929361835032 1.1963561443039197 1.1445725111688942 1.2015701136995067 1.1170954787884873 1.1216491471079826 0.9641247406012953 1.0818931754220316 1.0 9.155504619862654 -8.662665435765307 3.862870926359256 0.9829014922001572 1.15731714329931 0.4126736959514409 0.07190067713669883 0.11022107122009771 3.123413618241495 0.010894198422328796 0.012277914495644372 2.174375591504829e-09 8.662665435765307 0.1744156510991527 LLSS(ph)NEDDANILSSPTDR ddPTM_A549_MK2206_60min_R1 1 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLS(0.353)S(0.647)NEDDANILSSPTDR 173.98 1.9208999999999998e-30 7505000.0 1347.2 1503.0 1376.1 858.0 1466.7 911.08 1230.8 734.33 1432.2 1629.6 1578.6 True False 1574.5744241223035 1579.4962801679474 1571.2516722606226 1068.2100385170834 1250.9503729257412 1007.489880874042 1454.4204282667479 838.4235262913081 1107.8089867534377 1261.4722281936463 1186.5900528564105 1.3269742320289306 1.3311221313255712 1.324173979444913 0.9002351199098985 1.0542397266135848 0.8490631439634684 1.2257143271727289 0.7065822979663609 0.9336071746823364 1.0631070310736015 1.0 10.212605878560428 -6.255133789698027 24.692839202802922 0.9615720075978322 1.327793355872556 0.6221963785080883 0.12518773032950822 183.5745223963216 718878.7720709012 0.015295219291637402 0.03940459808763096 5.557330305773674e-07 6.255133789698027 0.36622134827472386 LLSS(ph)SLTADCSLR ddPTM_A549_PD325901_60min_R1 1 LLSSSLTADCSLR 13 0 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLS(0.003)S(0.498)S(0.498)LTADCSLR 260.28 1.4015999999999998e-69 9324100.0 4415.1 4238.2 4943.3 3991.8 5123.2 3962.3 4859.4 5255.6 4289.5 4990.8 5403.3 True False 4863.317701775168 4595.367987964192 5278.782064477724 4238.364419964432 4763.364106080514 3930.0323424963763 5044.32712616571 5150.772935061559 4109.227232138067 4675.680036264743 4738.728354340789 1.0262917259902125 0.9697470807236133 1.1139659566352293 0.8944096607863138 1.0051988107140932 0.8293432432978295 1.0644896159842092 1.086952564044598 0.8671582173251007 0.9866950976376831 1.0 12.210284246101473 -6.27415733532287 24.946052297429404 0.9506431056861413 1.0299761448317677 0.10261961957374754 0.0819059688433992 1061.2334354245406 2081592.536996173 0.012019925487994014 0.028126786973420474 5.319155230814619e-07 6.27415733532287 0.0793330391456264 LLSSETRDT(ph)LR ddPTM_A549_MK2206_60min_R1 2 LLSSETRDTLR 11 1 Q8WYP3-2;Q8WYP3;E7EPJ1 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 LLSS(0.001)ET(0.144)RDT(0.855)LR;LLSSET(0.003)RDT(0.997)LR 117.07 7.1579e-06 8515700.0 1047.5900000000001 1371.4299999999998 1180.06 1302.0700000000002 1926.2800000000002 1383.5700000000002 1364.26 1545.29 2235.2 2193.04 2163.84 True False 1224.3975808835246 1441.2299291488555 1347.4102524292352 1621.077208452144 1642.926763727687 1529.978459060563 1612.1283827325253 1764.3395897521475 1728.9307688809395 1697.6307408675723 1626.4988090541083 0.7527811112235453 0.8860934426303109 0.8284114595895848 0.9966667048436899 1.0101001947140267 0.9406575956550027 0.9911648098101344 1.0847469299889625 1.0629769657725114 1.043733159481888 1.0 10.667554050679398 -5.601699740217326 0.5966752229274663 1.0316107347368073 0.6618223904773507 0.7976927881595057 0.044063110038757757 0.8468292671255206 0.2572819892756924 0.008287521074040759 0.19757863947508608 2.5020746324367264e-06 5.601699740217326 -0.3697883442594566 LLSSETRDT(ph)LR ddPTM_A549_PD325901_60min_R1 2 LLSSETRDTLR 11 1 Q8WYP3-2;Q8WYP3;E7EPJ1 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 LLSSETRDT(1)LR;LLSSET(0.001)RDT(0.999)LR 141.32 1.2618e-11 14584100.0 1735.6399999999999 1860.46 1928.1599999999999 1987.3 2541.3 2105.9300000000003 1599.65 2502.3 2377.7 2129.17 2298.1000000000004 True False 1911.8408950893636 2017.2474934849388 2059.016532567993 2110.051007514233 2362.8078550090577 2088.7800042988656 1660.5255561120673 2452.3896634836256 2277.7735376744795 1994.7338428335743 2015.448268856175 0.9485933847234831 1.0008927168494306 1.0216171580213986 1.0469388076687018 1.1723485497099955 1.0363848264308508 0.8238988724103862 1.2167961348248484 1.1301572820656824 0.9897221742960652 1.0 10.976885038219498 -5.660686139951795 1.5164184423070055 1.06173453851476 0.9459404621877741 0.08446173584937267 0.09900152962369237 1.0392828755336208 3.5787601065389145 0.01435903389089239 0.14349685060023162 2.1843079178978945e-06 5.660686139951795 -0.11579407632698602 LLSSNEDDANILS(ph)SPTDR ddPTM_A549_MK2206_60min_R1 2 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLSSNEDDANILS(0.66)S(0.34)PTDR;LLSSNEDDANILS(0.571)S(0.393)PT(0.036)DR 208.2 2.6e-55 18634200.0 1781.88 1844.44 1996.9 2163.08 2116.67 1983.23 1931.0 2026.6399999999999 2750.3 3046.8 3563.8 True False 2082.6177812166356 1938.314117759793 2280.0904471602607 2693.03469710435 1805.3106469357945 2193.094082238472 2281.8377047311424 2313.9224263246983 2127.361441326615 2358.525763905501 2678.8101041237023 0.7774413639886975 0.7235727962859309 0.851157924053795 1.005310041558657 0.6739225912866083 0.8186821749188082 0.8518101754277135 0.8637874042518715 0.794144175450063 0.8804378333032408 1.0 11.387376599493326 -10.869409149130528 0.6844500835283814 1.0270285392111764 0.8159787487463134 0.17619682679080273 0.08782830189946343 0.8235384235807519 0.537029482049002 0.10586990587734164 0.015760370505438246 1.3507993745313593e-11 10.869409149130528 -0.21104979046486305 LLSSNEDDANILSS(ph)PTDR ddPTM_A549_MK2206_60min_R1 2 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLSSNEDDANILS(0.076)S(0.924)PTDR;LLSSNEDDANILS(0.063)S(0.937)PTDR 367.11 2.3003999999999987e-246 50135000.0 11455.4 12498.0 12227.0 10283.4 17324.9 12871.199999999999 11843.5 12446.3 18172.6 20140.0 18771.0 True False 13388.791462359437 13134.094816725888 13960.972456021094 12802.833461639371 14776.430160156247 14233.221840788914 13995.310645252866 14210.601140195155 14056.535115679035 15590.36001216253 14109.642646755165 0.9489107412255048 0.9308594941450465 0.9894632206884233 0.9073818368166593 1.0472575762614673 1.008758492126813 0.9918968889315852 1.0071552835155047 0.9962360824858776 1.1049436475804644 1.0 13.78439382898124 -6.757563990211788 24.99999994974011 1.0020243239314057 0.9464406197105711 0.43429342212076505 0.03870129500680173 51.301530755071695 330939.58580889297 0.0030253932168299875 0.00611781931284948 1.747575750554791e-07 6.757563990211788 -0.055583704220834584 LLSSNEDDANILSS(ph)PTDR ddPTM_A549_PD325901_60min_R1 2 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLSSNEDDANILS(0.074)S(0.926)PTDR;LLSSNEDDANILS(0.034)S(0.966)PTDR 346.13 9.772799999999996e-220 135848000.0 41279.0 41877.0 43125.0 42910.0 50899.0 46587.0 45706.0 50688.0 50232.0 50151.0 52397.0 True False 45469.61369200629 45406.12175734431 46051.721831691735 45560.45324431933 47324.0298320175 46207.610917870625 47445.36684128285 49676.988076033274 48120.92372648542 46984.45730117679 45952.501171949385 0.9894915952858326 0.988109909130722 1.0021592004180813 0.9914684093872703 1.0298466595960902 1.005551596527176 1.0324871471902546 1.0810507983046942 1.047188346645638 1.022457017635796 1.0 15.487855768379614 -6.769203848372331 1.4570191412680318 1.0279290473282263 0.9908534876852195 0.4221035045322097 0.0209211486462034 0.4237762518964625 1.8027509485403888 0.00400397157388983 0.010429967530803221 1.7013597397353757e-07 6.769203848372331 -0.037075559643006795 LLSSS(ph)LTADCSLR ddPTM_A549_MK2206_60min_R1 1 LLSSSLTADCSLR 13 0 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLS(0.002)S(0.22)S(0.766)LT(0.011)ADCSLR 109.6 6.1659e-05 4010000.0 1318.6 1757.3 1584.1 1668.4 3046.9 2034.1 2330.0 2356.7 3684.7 2889.7 3267.9 True False 1541.1474433251706 1846.7390639648272 1808.749199933182 2077.158074897322 2598.705046204023 2249.3471118736984 2753.3308399914877 2690.769442091057 2850.121333256799 2236.914763016189 2456.390240548249 0.62740334083936 0.7518101291400051 0.7363444008511781 0.8456140399066701 1.0579365620765575 0.9157124445225201 1.1208849451286549 1.095416110060141 1.1602884941525708 0.9106512174209443 1.0 11.262324060915903 -6.4959421700845 0.9405681076803611 1.079314014150022 0.6535898485046477 0.7604376269123199 0.0817161799475183 0.19809261102642972 0.30703105836905115 0.012085957021341475 0.05504396812253422 3.1919628631563203e-07 6.4959421700845 -0.4257241656453742 LLSSS(ph)LTADCSLR ddPTM_A549_PD325901_60min_R1 1 LLSSSLTADCSLR 13 0 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLS(0.002)S(0.021)S(0.952)LT(0.025)ADCSLR 215.02 1.3435999999999998e-37 15031000.0 5002.2 5132.8 5193.8 5434.4 6342.5 5401.4 5525.7 5152.8 3735.4 5196.9 5658.5 True False 5510.019661574987 5565.3590695631665 5546.282500856589 5770.0705455821235 5897.02468043716 5357.412789228462 5735.983537279063 5050.023361706601 3578.414128203411 4868.766847091499 4962.540372186875 1.110322384973737 1.1214738122343262 1.1176296986804104 1.162725159460897 1.1883076485357598 1.0795706205746345 1.1558562967924733 1.0176286705917867 0.7210851418477202 0.981103725498952 1.0 12.276863123848035 -8.53671129498399 6.133109638290871 0.8678869323675568 1.130998434903141 0.6513036589363781 0.07399026800626836 0.08097387474620898 11.6225063170649 0.01692196246447636 0.01950320000057697 2.905953797217382e-09 8.53671129498399 0.26311150253558424 LLSSSLTADCSLRS(ph)PSGR ddPTM_A549_MK2206_60min_R1 2 LLSSSLTADCSLRSPSGR 18 1 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLSSSLTADCS(0.002)LRS(0.974)PS(0.023)GR;LLSSSLTADCS(0.073)LRS(0.776)PS(0.151)GR 123.6 4.6022e-11 41349000.0 9135.7 10731.2 9093.6 7678.1 10740.6 9241.900000000001 8196.3 7932.7 11354.2 12012.7 12829.3 True False 10677.582813579378 11277.37224333885 10383.209219438402 9559.234844683007 9160.671967986787 10219.871723723283 9685.461615374346 9057.184517874877 8782.491828931625 9299.022726817515 9643.430739332794 1.1072390212778294 1.1694357068736623 1.0767132050928994 0.9912690932381174 0.949939105242186 1.0597755093567842 1.004358498254166 0.9392077117257879 0.9107227569033449 0.9642857379469179 1.0 13.235330774488753 -6.16257125436312 2.3887206761659625 0.966457430409502 1.1385017178611063 0.7145078023851064 0.04027243063270632 0.13110843137205014 1.4402037004756412 0.00687321900024488 0.02251378059986561 6.877470649173144e-07 6.16257125436312 0.17204428745160427 LLSSSLTADCSLRS(ph)PSGR ddPTM_A549_PD325901_60min_R1 2 LLSSSLTADCSLRSPSGR 18 1 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLSSSLTADCS(0.257)LRS(0.547)PS(0.196)GR;LLSSSLTADCS(0.045)LRS(0.824)PS(0.131)GR 123.36 4.9099e-11 63501000.0 7711.3 8231.2 9074.8 7798.6 8334.1 9041.5 8365.3 9627.3 6648.4 8878.5 9901.7 True False 8494.145499240974 8924.872111398912 9690.67049920547 8280.301810094348 7748.741567084165 8967.869021699775 8683.646069167802 9435.275949029256 6368.990868433787 8317.909994785708 8683.853672047857 0.9781539187587273 1.0277547789786994 1.1159412474208794 0.9535284820318326 0.8923159992926077 1.0327061418096122 0.9999760932314276 1.0865309694704006 0.7334290867814484 0.9578592994444308 1.0 13.084119700574895 -8.743720203504996 24.999830469013393 0.8741192666579072 1.0094315126513904 0.2528230938991616 0.0845991306889535 252.57581889080805 356356.8518168467 0.018345441955707895 0.020779834296772257 1.80417971874915e-09 8.743720203504996 0.13531224599348324 LLSSSLTADCSLRS(ph)PSGREVEPGEDR ddPTM_A549_PD325901_60min_R1 1 LLSSSLTADCSLRSPSGREVEPGEDR 26 2 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLS(0.002)S(0.002)S(0.002)LT(0.011)ADCS(0.175)LRS(0.766)PS(0.043)GREVEPGEDR 52.236999999999995 0.0014850999999999998 4506800.0 1445.2 1417.2 1411.0 1445.0 2004.1 1910.9 1482.6 1976.6 1937.5 1644.6 1981.6 True False 1591.9156400999907 1536.632417663833 1506.7589450322794 1534.254368166894 1863.3389297696667 1895.338263956877 1539.0211543098503 1937.175162387298 1856.0736128377432 1540.759675330808 1737.8757623973684 0.9160123379038164 0.8842015355252301 0.8670118875205052 0.8828331698753987 1.0721934042046966 1.090606305103359 0.8855760507222901 1.1146798892660772 1.0680128309501957 0.8865764220138255 1.0 10.763109234835275 -6.753181732128014 24.836918533445687 1.03469731123204 0.8858135459619385 0.4070752385759643 0.07304837834714895 88.75725566951293 266956.95767175057 0.008205445081023074 0.016852756847502096 1.7652989702435196e-07 6.753181732128014 -0.1488837652701014 LLSVET(ph)PR ddPTM_A549_PD325901_60min_R1 1 LLSVETPR 8 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 LLS(0.002)VET(0.998)PR 66.62100000000001 0.008894599999999999 949970.0 782.91 688.2 981.69 1000.7 954.73 882.87 790.19 882.7 1042.6 1036.3 935.16 True False 862.3904468521202 746.1970292381098 1048.313386781529 1062.5109662454056 887.6730584396955 875.6801994346155 820.2611128585596 865.093856035246 998.783147739165 970.8678411439356 820.1412484676647 1.0515145390667682 0.9098396533917654 1.2782107822770488 1.2955219216574945 1.0823416821165939 1.0677187631651481 1.0001461509113447 1.0548108117370878 1.2178184545714184 1.1837812607985336 1.0 9.679728588426174 LLSVKGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LLSVKGSPK 9 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LLSVKGS(1)PK;LLSVKGS(1)PK 76.52199999999999 0.00055376 60978000.0 16473.7 21036.2 20829.1 17749.3 29435.0 23953.5 21419.8 20560.8 32373.0 27105.0 27289.0 True False 19254.05781670398 22106.85272712508 23782.979584829394 22097.879296796364 25105.150492308723 26488.24347095354 25311.50039761787 23475.356364809184 25040.567189058096 20981.961674759954 20512.388161914736 0.9386551026980323 1.0777317859151465 1.1594446924998791 1.0772943219661473 1.2239018828105714 1.2913290866898741 1.233961652725236 1.1444477444316201 1.2207533804157826 1.022892191252361 1.0 14.324207847416854 -5.307720727144904 2.34278641668765 1.1390287261185632 0.9015331875212597 0.33443535386227075 0.08707702823361037 0.5834916730711678 4.07141438016583 0.014732258866680233 0.2693173087098169 4.923560432193607e-06 5.307720727144904 -0.23749553859730355 LLSVKGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LLSVKGSPK 9 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LLS(0.046)VKGS(0.954)PK;LLS(0.004)VKGS(0.996)PK 62.232 0.0020280000000000003 100321000.0 26559.0 25953.0 29364.0 28571.0 32811.0 34064.0 31401.0 34043.0 32167.0 34511.0 33297.0 True False 29255.250128297565 28140.15039206143 31356.817620076443 30335.765780551083 30506.468551805043 33786.59407788322 32595.982238286506 33363.98565878316 30815.132853755716 32331.96957031591 29201.68008707367 1.001834484901696 0.963648334895562 1.073801833544391 1.0388363166124617 1.044681965586937 1.1570085685870894 1.1162365364284417 1.1425365102041496 1.0552520526857032 1.107195526898053 1.0 14.833763754941085 -5.760871926116578 24.999774171325573 1.0535523683573114 0.9827413978956583 0.23014967116169716 0.051990720742638497 19.003498305180077 837002.355944143 0.008258421730706811 0.028625170544291697 1.7343153737114253e-06 5.760871926116578 -0.07081097046165308 LLSVKGS(ph)PKVDEK ddPTM_A549_MK2206_60min_R1 2 LLSVKGSPKVDEK 13 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LLS(0.151)VKGS(0.849)PKVDEK;LLS(0.012)VKGS(0.988)PKVDEK 63.145 0.0013693 25336000.0 5639.6 6658.700000000001 7994.299999999999 6846.0 8633.4 6109.8 5332.9 5131.7 9805.3 9529.1 10654.2 True False 6591.426605017921 6997.599388392758 9128.011949388196 8523.270307328623 7363.43829659582 6756.334980642998 6301.818899824289 5859.134190172135 7584.415205846579 7376.469691752625 8008.468099038879 0.823057109487516 0.8737750218712317 1.1397950065485905 1.0642822324973147 0.91945653095372 0.8436488598180027 0.786894424987544 0.7316173477516016 0.947049437177231 0.9210837329348791 1.0 12.96731058756041 -4.3919090290119005 15.940274716040237 0.9405004894780802 0.9244719754351626 0.0 0.11843510965019854 0.0 0.0 0.016589992939176474 0.0 4.055934855860299e-05 4.3919090290119005 -0.016028514042917608 LLSVKGS(ph)PKVDEK ddPTM_A549_PD325901_60min_R1 2 LLSVKGSPKVDEK 13 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LLS(0.007)VKGS(0.993)PKVDEK;LLSVKGS(1)PKVDEK 84.375 7.8412e-05 53047000.0 10260.8 9770.4 12976.9 11879.9 13099.9 20136.6 16334.5 15705.5 15740.8 14066.7 14404.7 True False 11302.468862398277 10593.785897221776 13857.590470438967 12613.69444178953 12179.808216201607 19972.614205868445 16956.118336081374 15392.241481773595 15079.268916106514 13178.526161361962 12633.01321891673 0.8946771974776302 0.8385794990983302 1.0969346924840186 0.9984707704494228 0.9641253440599198 1.58098577590035 1.3422069653731705 1.2184141039863066 1.1936399222258984 1.0431815381644958 1.0 13.62491117049649 -6.08103982842319 1.2031449590227818 1.1492670228212576 0.8571739557619682 0.31024396514827735 0.17072861721771943 0.683695614259998 1.64402835667536 0.028533759214507414 0.17065908825390083 8.29774666773057e-07 6.08103982842319 -0.2920930670592894 LLT(ph)LSRTPPERDLITPVDPLGPSTGSSR ddPTM_A549_PD325901_60min_R1 2 LLTLSRTPPERDLITPVDPLGPSTGSSR 28 2 Q5VV67-2;Q5VV67;E7EVG6 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 LLT(0.333)LS(0.333)RT(0.333)PPERDLIT(0.002)PVDPLGPSTGSSR;LLT(0.332)LS(0.332)RT(0.332)PPERDLIT(0.004)PVDPLGPSTGSSR 54.375 0.0020421 3910000.0 1596.73 1682.7199999999998 1781.6599999999999 1998.89 2109.02 1801.05 2076.76 2103.5 1949.3600000000001 1693.05 2287.7 True False 1758.8288541495003 1824.5287199063532 1902.5741615919271 2122.3568954914344 1960.8897109240168 1786.382845936224 2155.7922382466763 2061.5440423361733 1867.4351782820042 1586.1505340622793 2006.327402925143 0.8766409966714307 0.9093873299274412 0.9482869838781308 1.0578317837842046 0.9773528029698045 0.8903745437219026 1.074496732240022 1.0275212506844729 0.9307729015510432 0.7905741265108263 1.0 10.9703413362925 -5.772733200977505 2.9926663653871963 0.9792031694478752 0.8860400171236398 0.11456545956396047 0.07647665213878942 0.24485930956575225 4.37073583329153 0.007427969913126426 0.03261691981767738 1.6875894395277607e-06 5.772733200977505 -0.09316315232423544 LLT(ph)PTHSFLAR ddPTM_A549_MK2206_60min_R1 4 LLTPTHSFLAR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LLT(0.878)PT(0.122)HSFLAR;LLT(0.658)PT(0.341)HS(0.001)FLAR;LLT(0.909)PT(0.09)HS(0.001)FLAR;LLT(0.823)PT(0.164)HS(0.012)FLAR 98.531 0.00024567 50372300.0 6928.03 7361.84 8234.16 7063.2699999999995 9828.75 7984.23 7543.74 7462.61 11859.56 10637.78 10175.63 True False 8097.312089928777 7736.526211038995 9401.88770413598 8793.771467082233 8382.953895066397 8829.115919097067 8914.339910247802 8520.45782078463 9173.388595825721 8234.698109740932 7648.740237898949 1.0586465010025032 1.0114771806087848 1.22920734810032 1.1497019369947665 1.0959914488309426 1.1543228877546974 1.1654651135984326 1.1139687786187826 1.199333264106977 1.076608415715127 1.0 12.901006437408995 -10.977093566762237 1.243530534903886 0.9999072530236216 1.1377677990329536 0.21286638753417453 0.06239008305804319 0.37130146071970055 1.020146577835995 0.04334197409558354 0.009954731624035566 1.0541597580197885e-11 10.977093566762237 0.13786054600933195 LLT(ph)PTHSFLAR ddPTM_A549_PD325901_60min_R1 5 LLTPTHSFLAR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LLT(0.981)PT(0.019)HSFLAR;LLT(0.994)PT(0.006)HSFLAR;LLT(0.984)PT(0.007)HS(0.009)FLAR;LLT(0.991)PT(0.009)HSFLAR;LLT(0.994)PT(0.006)HSFLAR 164.48 1.0236e-13 96202500.0 4872.34 4834.259999999999 4847.0599999999995 5373.509999999999 6292.11 5828.2699999999995 5659.429999999999 5992.530000000001 5950.25 5680.799999999999 5974.94 True False 5366.976369972869 5241.660056036947 5176.0106393395845 5705.419508573342 5850.173900201094 5780.806501476761 5874.802705608927 5873.004288101157 5700.181685051762 5322.113318508607 5240.060258265311 1.0242203534792123 1.000305301407386 0.9877769308425988 1.088807995971803 1.1164325621968625 1.1031946612366745 1.1211326618510573 1.1207894563497591 1.0878084228250404 1.0156588008914347 1.0 12.35536768684479 -6.257546991009856 24.8931793508384 1.0659495173241593 1.003721304238541 0.375494587900323 0.041068964528453177 391.4851003460391 2503665.1420526137 0.007455390837098258 0.0190022498656879 5.526536071474936e-07 6.257546991009856 -0.06222821308561843 LLT(ph)PTQSSLAR ddPTM_A549_PD325901_60min_R1 1 LLTPTQSSLAR 11 0 Q96T17-2 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 LLT(0.77)PT(0.126)QS(0.043)S(0.06)LAR 49.934 0.029088 4062300.0 2509.8 2323.4 2439.1 2687.4 3199.5 2792.9 2768.0 2401.4 3437.7 4224.5 4352.5 True False 2764.5930483828924 2519.201071973008 2604.631993499811 2853.3945944717725 2974.7781576757898 2770.1555483830434 2873.3377547077207 2353.5021931381434 3293.2254239237723 3957.7643490423206 3817.1700927707675 0.7242519932812737 0.6599656318024845 0.6823463273047883 0.7475157053849231 0.779315064662599 0.7257092246503146 0.7527402984083563 0.6165568041087234 0.862740025696188 1.036832064816242 1.0 11.898287759014739 -9.266178908152764 1.1145252802001668 0.9671038278291515 0.7130314937610388 0.7928194800449679 0.058179560319720505 0.1345281645504502 0.34911220212459276 0.014182613949278673 0.011887891479134292 5.417776584432222e-10 9.266178908152764 -0.2540723340681127 LLTLS(ph)RTPPER ddPTM_A549_PD325901_60min_R1 1 LLTLSRTPPER 11 1 Q5VV67-2;Q5VV67;E7EVG6 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 LLT(0.039)LS(0.654)RT(0.307)PPER 42.317 0.022147999999999998 5711700.0 625.57 562.94 534.97 738.02 856.5 800.22 655.05 622.6 621.71 713.48 696.19 True False 689.0774058797065 610.3809294381022 571.2762812359452 783.6058192349695 796.3423947645925 793.7032736320956 679.9782862071136 610.1817545797486 595.5816907547635 668.4307510367412 610.5630435120229 1.1285933749217127 0.9997017276498211 0.9356548636646986 1.2834150831134266 1.3042754605387632 1.2999530221590727 1.1136905409403866 0.9993755125923097 0.9754630534611379 1.0947776124671045 1.0 9.253996457741463 -8.205850653871803 4.009915148680084 0.9884997201314286 1.1567667177091512 0.23377669174631255 0.11473206520597509 0.2207323114968511 7.357110487591399 0.01968995218300928 0.025385249337847773 6.225143199399325e-09 8.205850653871803 0.16826699757772257 LLTLSRT(ph)PPER ddPTM_A549_MK2206_60min_R1 2 LLTLSRTPPER 11 1 Q5VV67-2;Q5VV67;E7EVG6 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 LLT(0.005)LS(0.149)RT(0.845)PPER;LLT(0.013)LS(0.22)RT(0.767)PPER 59.294 0.00386 7716000.0 1539.49 1672.29 1440.88 1485.43 1667.32 1491.66 1602.6100000000001 1572.13 2366.8 2046.31 2391.2 True False 1799.3182750831686 1757.4024180718943 1645.218450350181 1849.3604166834868 1422.059436685449 1649.506471116229 1893.7834924801516 1794.9842419462007 1830.7235790029572 1584.0471497759827 1797.3990462373306 1.0010677811640414 0.9777474967235767 0.9153328826975157 1.0289092010785985 0.7911762497384116 0.9177185637042039 1.0536244004605388 0.9986565007385616 1.0185404197445125 0.8812996496754696 1.0 10.811695026351478 -7.750092895945548 24.99849037515292 1.0111187910824277 0.9367737374517424 0.08510307541536577 0.07091397961858666 220.9440638339802 486780.7863289836 0.008793069865575223 0.012976623582087041 1.7778990752943657e-08 7.750092895945548 -0.07434505363068533 LLTPTHS(ph)FLAR ddPTM_A549_PD325901_60min_R1 2 LLTPTHSFLAR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LLT(0.338)PT(0.035)HS(0.627)FLAR;LLTPT(0.02)HS(0.979)FLAR 168.46 5.4395e-15 12611600.0 3255.23 2878.0499999999997 2781.71 2965.76 3844.17 3101.93 3817.88 3467.41 3609.29 3482.37 4414.76 True False 3585.6985532263307 3120.5933740173523 2970.493568381106 3148.9482594703445 3574.168760866552 3076.668910521613 3963.1715126240974 3398.249787419475 3457.6040929440705 3262.49256389502 3871.772507469424 0.9261129227785984 0.8059857256584945 0.7672180022587664 0.8133092151967589 0.9231350121866058 0.7946409311461619 1.023606501926016 0.877698723482222 0.8930287320015988 0.8426353969922094 1.0 11.918778471781941 -11.470179619770017 0.13627409866981385 1.176153410857421 0.7834517030968258 0.0 0.0805867236455987 16.426150045417742 0.42437650263141596 1.237896622218924 0.24515991577467938 3.387040426275486e-12 11.470179619770017 -0.3927017077605952 LLTRT(ph)PDIAQR ddPTM_A549_MK2206_60min_R1 3 LLTRTPDIAQR 11 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 LLT(0.016)RT(0.984)PDIAQR;LLT(0.017)RT(0.983)PDIAQR;LLT(0.002)RT(0.998)PDIAQR 85.837 0.000156 35888800.0 2498.0699999999997 2605.9300000000003 2607.6000000000004 2034.47 2732.74 2082.41 2097.72 2077.2 3466.75 3813.3199999999997 4540.9 True False 2919.6831440522583 2738.560706173027 2977.39689018734 2532.91524133083 2330.757566038789 2302.769244008116 2478.848570672506 2371.6494611582048 2681.5366602621675 2951.888363534241 3413.2692075355867 0.8553919912342038 0.8023277801021427 0.8723006329574131 0.7420789534381964 0.6828519593160418 0.6746521015465807 0.726238810932308 0.6948322317859477 0.7856212027876532 0.86482729138893 1.0 11.73693849020934 -10.284993969609008 0.7939517101538361 0.9938484167346938 0.7563325295039445 0.4203737253494225 0.07299306465348585 0.3075117212352567 0.36819074660955503 0.04014872932939772 0.014032291347329822 5.188072427708992e-11 10.284993969609008 -0.23751588723074935 LLTRT(ph)PDIAQR ddPTM_A549_PD325901_60min_R1 2 LLTRTPDIAQR 11 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 LLT(0.004)RT(0.996)PDIAQR;LLT(0.003)RT(0.997)PDIAQR 112.42 1.8650999999999998e-05 64760000.0 1777.71 1502.4 2379.3900000000003 2151.02 1940.49 2347.34 2393.3900000000003 2532.58 2322.79 2537.57 2579.87 True False 1958.1818105190673 1629.012520673259 2540.8697138344105 2283.883620079135 1804.1966767270803 2328.224041298097 2484.471766163262 2482.0657051294233 2225.17121401981 2377.3473971355943 2262.562345143368 0.865470874083245 0.7199856941710201 1.1230053922219798 1.0094235082544947 0.7974130218333306 1.029020944459574 1.0980788094066123 1.0970153863195078 0.9834739885935878 1.0507323266643303 1.0 11.143741831019224 -7.327417442306091 24.999906499394502 1.0118744401156812 0.9110161214817184 0.27688890085625484 0.10597077970082441 263.07760680739824 99682.68327894023 0.016043487260321482 0.025647288721686572 4.7052484216959845e-08 7.327417442306091 -0.10085831863396277 LLVDSQGLSGCS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LLVDSQGLSGCSPR 14 0 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 LLVDSQGLS(0.057)GCS(0.943)PR;LLVDS(0.005)QGLS(0.042)GCS(0.953)PR 121.99 1.7506e-06 6136800.0 3451.3 3610.1 4258.299999999999 3699.2 5543.2 4500.5 3971.3 3774.5 5741.3 4942.8 6061.5 True False 4033.7950638162906 3793.8386700161727 4862.190971577215 4605.504166063398 4727.802623032638 4976.739922809883 4692.833804660167 4309.546933921453 4440.90471697215 3826.2180470763114 4556.262261110565 0.8853298674763015 0.8326646827154862 1.0671446666004871 1.010807522072013 1.0376493608338209 1.0922856582001994 1.0299744693617159 0.9458513770607716 0.9746815399273575 0.8397712484056373 1.0 12.153635076465362 -5.7522711535726465 24.99999892312383 1.0035329219560756 0.8589972202109439 0.411485611569428 0.06481882138221717 96.5854885003297 263364.1817078327 0.006246597731889383 0.023518298939570866 1.7690041283388459e-06 5.7522711535726465 -0.14453570174513164 LLVDSQGLSGCS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LLVDSQGLSGCSPR 14 0 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 LLVDSQGLS(0.001)GCS(0.999)PR;LLVDSQGLSGCS(1)PR 132.81 7.4208999999999995e-09 11961100.0 5723.6 6061.9 6186.200000000001 6286.7 6819.4 6725.9 5813.799999999999 6636.5 6297.9 6603.700000000001 6924.7 True False 6304.655658508376 6572.757587239902 6606.032732642583 6675.015180868384 6340.4288696528465 6671.126500365037 6035.047340433427 6504.129801266469 6033.221164537201 6186.741255005511 6073.005799290001 1.0381441854123468 1.0822906818248597 1.0877698706322492 1.0991287348430927 1.044034713484731 1.098488412631676 0.9937496422511218 1.0709902174022081 0.9934489384552454 1.018728033444132 1.0 12.568195031522217 -8.221149299737275 0.9198025227268462 0.9963214089164908 1.0763029601031004 0.43334862007976827 0.030146202756668804 0.2521709812944663 0.42159823214739206 0.005514036878389969 0.0075089638382431255 6.009671042913354e-09 8.221149299737275 0.07998155118660966 LLVDVDESTLS(ph)PEEQKER ddPTM_A549_PD325901_60min_R1 1 LLVDVDESTLSPEEQKER 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LLVDVDES(0.113)T(0.098)LS(0.789)PEEQKER 97.45700000000001 4.6146e-07 4811400.0 1145.7 1119.2 1040.7 1354.2 1324.2 1883.4 1155.9 1366.3 1333.1 1086.2 1012.1 True False 1262.0106205802374 1213.5189118327412 1111.328160237486 1437.8458583886559 1231.1927602420003 1868.0622148392808 1199.8884070327495 1339.0480746583853 1277.0744429801262 1017.6171466279478 887.6181162305094 1.4217945730306618 1.3671632987689013 1.252034112324134 1.6198924200587805 1.3870748441577172 2.104578737951486 1.3518070272476788 1.50858578725836 1.438765635387817 1.1464582887847214 1.0 9.793795302926137 -10.304933665536483 0.6925156914733368 0.9951915463861218 1.5042863152223052 0.35521511352205803 0.21718792332116008 0.5414710591963233 0.4744352377717703 0.14639093464543546 0.044370006085867615 4.9552587201661405e-11 10.304933665536483 0.5090947688361833 LLVGVDEK ddPTM_A549_PD325901_60min_R1 1 LLVGVDEK 8 0 P53396;P53396-2 P53396 ACLY ATP-citrate synthase 0 107.66 0.005015100000000001 2532300.0 2403.6 2553.5 2972.3 3097.0 3425.2 3051.0 2596.3 3278.9 3001.8 3149.0 3034.6 False True 2647.611702563201 2768.6924065090284 3174.0181518918803 3288.294656202676 3184.6257682985192 3026.1536675558255 2695.1036172498757 3213.4997672527106 2875.64478504069 2950.1716025882974 2661.36343791434 0.9948328232231537 1.0403285650752008 1.1926286003159712 1.2355676828489273 1.1966143830375344 1.1370689265677163 1.0126777796879847 1.2074637088165114 1.0805156274688579 1.1085188744083336 1.0 11.377949824061526 -9.684137779799068 0.720829895484565 1.0071249454471312 1.1310857034735473 0.043753591706528816 0.08385537283962362 0.6179069285441595 0.6838741145990395 0.033888932134388046 0.01847076702349209 2.0694847012116144e-10 9.684137779799068 0.12396075802641615 LLYNNVSNFGR ddPTM_A549_PD325901_60min_R1 1 LLYNNVSNFGR 11 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 98.04 0.0007682 3246800.0 3141.1 3042.5 3473.3 3545.0 4109.6 3656.2 3446.0 3144.6 4534.7 3604.6 3959.1 False True 3459.982159644397 3298.902152654679 3709.019024649622 3763.966598720855 3820.9558733503445 3626.4251194092462 3577.1394157235545 3081.8784861090207 4344.1223288440315 3377.004940835114 3472.1557988026984 0.9964939248513851 0.9501019953632949 1.0682179140488457 1.0840431181166414 1.1004563431940244 1.0444304142860594 1.0302358600835417 0.887597983699851 1.2511311647772294 0.9725960286688763 1.0 11.76161596894135 -8.763405529055914 24.999999590384224 1.1185897036288046 1.025407286546553 0.00468958042246248 0.09031847899450113 76.70845182202727 975362.3296711139 0.01800527376321015 0.019645643868413182 1.7242271168565999e-09 8.763405529055914 -0.0931824170822515 LLYNS(ph)PEYEASFPR ddPTM_A549_MK2206_60min_R1 4 LLYNSPEYEASFPR 14 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 LLYNS(1)PEYEASFPR;LLYNS(0.982)PEYEAS(0.018)FPR;LLY(0.001)NS(0.796)PEY(0.001)EAS(0.201)FPR;LLY(0.003)NS(0.997)PEYEASFPR 120.53 2.2451e-06 13430900.0 3857.5 3932.02 3731.0099999999998 3729.99 4988.200000000001 4721.1 3943.7699999999995 4024.1400000000003 6105.5 5891.4 6584.9 True False 4508.551693179772 4132.143022984683 4260.123320776909 4643.837717445616 4254.442387828583 5220.683668387453 4660.301960014258 4594.574168411893 4722.61399848004 4560.528648244998 4949.687596005435 0.9108760110069019 0.834829055942735 0.8606852933940664 0.9382082459493707 0.8595375577363836 1.054750136675438 0.9415345654896037 0.9282553856772434 0.9541236506100605 0.9213770687114675 1.0 12.273121755729749 -7.236448459440403 24.998770015043423 0.9753674184837349 0.8803406092284012 0.4855865619732408 0.04349537180289728 442.1009849806206 442240.21388323914 0.0060094543285985754 0.010406175607072854 5.801650204054005e-08 7.236448459440403 -0.09502680925533369 LLYNS(ph)PEYEASFPR ddPTM_A549_PD325901_60min_R1 2 LLYNSPEYEASFPR 14 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 LLYNS(0.999)PEYEAS(0.001)FPR;LLYNS(0.999)PEYEAS(0.001)FPR 139.66 8.596799999999999e-10 22380000.0 3786.6 3579.2 3419.7 3157.8 4590.7 3976.2 3445.8 3938.1000000000004 4128.1 3932.0 4706.2 True False 4171.012844452413 3880.831745203492 3651.7814063266346 3352.850134115861 4268.265069055242 3943.819145504906 3576.931804614109 3859.5515061203146 3954.6103128544455 3683.732848960682 4127.367235059796 1.0105746852429003 0.9402680992953291 0.8847725919096047 0.8123459685474984 1.0341374600250235 0.9555290142355769 0.8666376411165864 0.9351122122924926 0.9581435543854997 0.8925139536092948 1.0 12.011006093404152 -9.48693286288006 0.838387767212538 0.9933052933508428 0.9272120772389477 0.0 0.06645644789133673 0.6895249828585509 1.035367848222899 0.019152082269688044 0.012981347024929493 3.2588707564306034e-10 9.48693286288006 -0.06609321611189511 LMAVT(ph)EYIPPK ddPTM_A549_PD325901_60min_R1 1 LMAVTEYIPPK 11 0 Q7Z7H8;Q7Z7H8-2 Q7Z7H8 MRPL10 39S ribosomal protein L10, mitochondrial 1 LMAVT(0.541)EY(0.459)IPPK 40.431999999999995 0.047275 1980300.0 2161.3 2167.3 2355.0 2272.7 2802.2 3079.7 2287.4 2832.1 2844.4 2862.8 3029.8 True False 2380.7135849350334 2349.9459771400125 2514.824461765427 2413.0795173238052 2605.3831390651962 3054.619944271282 2374.448258713307 2775.611543760531 2724.859759667447 2682.0423194314944 2657.153807484632 0.8959637858482539 0.8843846263324008 0.9464354132160908 0.9081444628935962 0.980516495404365 1.1495834135258083 0.8936058770948809 1.0445806847696315 1.0254806296843268 1.0093666056803925 1.0 11.375666024298193 -6.862819307794259 4.469891934436197 1.0154520962207918 0.9097132476275783 0.44751886327665735 0.05760060336572993 0.1476148250296274 5.181116587613679 0.007670891845057456 0.014943439516653436 1.3714522527773482e-07 6.862819307794259 -0.10573884859321347 LMEDLDR ddPTM_A549_MK2206_60min_R1 4 LMEDLDR 7 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ;;; 116.88 0.015077000000000002 41708600.0 6215.0 6802.7 6267.8 5390.8 7256.4 6598.0 5292.2 7051.999999999999 7784.1 7671.2 8274.1 False True 7263.940057838569 7148.928373319026 7156.668288202256 6711.546242002212 6188.993172494953 7296.195980602068 6253.7242366536275 8051.642595844243 6021.01377865342 5938.270592120219 6219.412616457134 1.1679463167659145 1.1494539459244604 1.1506984227521837 1.0791286341483193 0.995108952269594 1.173132646207725 1.0055168586348011 1.2945985565483886 0.9681000682799638 0.9547960488112675 1.0 12.602562618178801 LMEDLDR ddPTM_A549_PD325901_60min_R1 6 LMEDLDR 7 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ;;;;; 116.88 0.0088255 107999000.0 17684.8 17278.5 16946.2 17572.300000000003 17936.899999999998 16020.3 16572.5 15628.0 16757.2 19684.800000000003 17905.7 False True 19480.14787713834 18734.61983390102 18096.27103777888 18657.70106141114 16677.074022945726 15889.835988313536 17203.175556319977 15316.287280071172 16052.953158732727 18441.898368571008 15703.412413584252 1.2405041250962128 1.1930285813352655 1.1523782577425452 1.1881303610972656 1.0620031865506638 1.0118715327483865 1.0955055565781584 0.9753477063890778 1.0222589037301284 1.174387953577391 1.0 13.938790476068593 -6.65242498413231 0.7353554862702308 1.0086553914515093 1.2342925981209916 0.5288945938179811 0.06041717896294963 0.2113033247323854 0.19199925062035686 0.005618774003263845 0.02683861575579905 2.2262555536377339e-07 6.65242498413231 0.22563720666948228 LMELHGEGS(ph)SSGK ddPTM_A549_MK2206_60min_R1 1 LMELHGEGSSSGK 13 0 D6RAT0;P61247;H0Y9Y4;D6RG13;D6R9B6 D6RAT0 RPS3A 40S ribosomal protein S3a 1 LMELHGEGS(0.958)S(0.035)S(0.008)GK 85.493 9.089100000000001e-05 4025400.0 1358.2 1408.3 1166.7 1118.6 1729.3 1322.6 1475.4 1500.0 2667.0 2125.1 2371.8 True False 1587.4309551981246 1479.976454664352 1332.1556035364204 1392.6570502158622 1474.9222607898587 1462.5566541291735 1743.4610821130636 1712.62959355734 2062.928758323848 1645.0384340539501 1782.8166016500916 0.8904061997901931 0.8301338754051063 0.7472196536107188 0.7811555316048123 0.827298926555171 0.8203629317651067 0.9779250880317121 0.9606313919066102 1.1571177632149587 0.9227188217404861 1.0 10.799942585214152 -8.010016016103787 1.5834885690273781 1.0713342395108627 0.8085756863964442 0.6032076053623198 0.07117058482642068 0.13640643945481937 0.6838627372841908 0.011973004152438778 0.017019138722664515 9.772011826343284e-09 8.010016016103787 -0.26275855311441854 LMELHGEGSS(ph)SGK ddPTM_A549_MK2206_60min_R1 1 LMELHGEGSSSGK 13 0 D6RAT0;P61247;H0Y9Y4;D6RG13;D6R9B6 D6RAT0 RPS3A 40S ribosomal protein S3a 1 LMELHGEGS(0.372)S(0.451)S(0.177)GK 68.257 0.0012118 3858100.0 1541.6 2062.5 2004.3 1802.2 2394.7 1590.9 1593.8 1843.4 3263.7 2471.3 3197.1 True False 1801.7843914986208 2167.472440350229 2288.5398784332274 2243.739080903831 2042.4428022399081 1759.247982046048 1883.3728295186388 2104.7075951757333 2524.477161057949 1913.031613607608 2403.1718345288414 0.7497526250976029 0.9019215393622393 0.952299725534155 0.9336573642657275 0.8498946154802715 0.7320525135860545 0.783702938948553 0.8758040373706261 1.05047717553368 0.7960444551326357 1.0 11.230724094161662 -8.69692280260412 5.51857367824633 1.023803308881311 0.8483318499669464 0.05591948752303799 0.09622243432943328 0.11184319679518817 6.538736271063136 0.012514661648677403 0.014113608644807797 2.00944996777646e-09 8.69692280260412 -0.17547145891436455 LMHNAS(ph)DSEVDQDDVVEWK ddPTM_A549_MK2206_60min_R1 2 LMHNASDSEVDQDDVVEWK 19 0 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 LMHNAS(0.972)DS(0.028)EVDQDDVVEWK;LMHNAS(0.79)DS(0.21)EVDQDDVVEWK 112.45 5.7476e-11 9097300.0 3111.0 4172.4 3337.8 3270.4 4877.799999999999 3836.6 3465.8 3876.1000000000004 5954.8 5644.5 5531.9 True False 3636.0607433524992 4384.757338238688 3811.1502301224505 4071.6481468138363 4160.282081582584 4242.586465471032 4095.4909979581535 4425.549045058407 4606.04730786159 4369.403529724498 4158.176557326984 0.8744363528637373 1.0544904185255082 0.9165436285784812 0.9791907800642378 1.0005063575888546 1.0202997412400183 0.9849247480224537 1.064300417273118 1.1077084496918312 1.0507979806738408 1.0 12.021735301389464 -7.31143993286908 0.9459189969657503 1.0509665455064896 0.9572593241538296 0.39231786853386064 0.04976627305756723 0.47948076560466973 0.8480426460504035 0.009632577950695137 0.021910985207315218 4.881576135020974e-08 7.31143993286908 -0.09370722135265996 LMHNAS(ph)DSEVDQDDVVEWK ddPTM_A549_PD325901_60min_R1 1 LMHNASDSEVDQDDVVEWK 19 0 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 LMHNAS(0.815)DS(0.185)EVDQDDVVEWK 41.763000000000005 0.012372 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LMIEMDGTENK ddPTM_A549_MK2206_60min_R1 2 LMIEMDGTENK 11 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879 P06733 ENO1 Alpha-enolase;Enolase 0 ; 70.028 0.0019756 3830900.0 3231.6 3582.3 3707.1000000000004 3330.6 4761.9 3705.3 2512.7 3399.1 5368.200000000001 4667.3 4315.7 False True 3777.015074965584 3764.6237687595726 4232.822523244931 4146.597149516313 4061.4308180507846 4097.392386620919 2969.225065084381 3880.932834307171 4152.311271253878 3612.953688419374 3243.9925827393954 1.1643106383973532 1.1604908681944424 1.3048188043853406 1.278238788701148 1.2519852356200833 1.2630708246443858 0.9152995851109541 1.196344546210371 1.2800002359276208 1.1137367291291427 1.0 11.663554805555952 LMIEMDGTENK ddPTM_A549_PD325901_60min_R1 3 LMIEMDGTENK 11 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879 P06733 ENO1 Alpha-enolase;Enolase 0 ;; 145.89 5.6869999999999993e-11 3509000.0 5229.4 5562.4 4806.1 5842.6 7466.0 7112.9 5997.4 6481.5 7728.1 5901.5 6511.9 False True 5760.28483831919 6031.1629692445 5132.2708474270985 6203.484132492661 6941.61391630175 7054.974900674482 6225.634338903209 6352.221397861611 7403.314832191671 5528.878282843706 5710.9775823352 1.008633768084908 1.0560648999743363 0.8986676577582589 1.0862385717781222 1.2154861083281203 1.2353357720220162 1.09011710327141 1.1122826707479752 1.2963305713352984 0.9681141631417446 1.0 12.47952200616454 -6.515201442193419 21.82384283296272 1.1487606783351105 0.9942557754801356 0.2772338768982985 0.09835982313815965 67.76564760095643 192630.6929035365 0.0161179587809194 0.034848638292604636 3.0535044539281004e-07 6.515201442193419 -0.15450490285497498 LMLPDS(ph)PLVEEGR ddPTM_A549_MK2206_60min_R1 5 LMLPDSPLVEEGR 13 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 LMLPDS(1)PLVEEGR;LMLPDS(1)PLVEEGR;LMLPDS(1)PLVEEGR;LMLPDS(1)PLVEEGR;LMLPDS(1)PLVEEGR 102.9 4.5499e-05 12432650.0 5101.700000000001 5560.58 4785.94 4591.41 5586.779999999999 4423.29 4378.3 4522.15 6548.42 6280.51 6704.289999999999 True False 5962.742235410303 5843.589770842511 5464.658257640433 5716.305656116229 4764.972062762712 4891.3596118577325 5173.780436366835 5163.178611003553 5065.213325677935 4861.738428996366 5039.429764009063 1.1832176485513133 1.159573611398784 1.0843802798221924 1.1343159690291398 0.9455379449463726 0.9706176771806946 1.0266598957916402 1.0245561209877927 1.005116364921487 0.9647397933230968 1.0 12.2990447796612 -6.745613986013932 24.803191571134676 1.000308525754769 1.137744093664083 0.8256367852752415 0.03282996703474886 68.55288387524062 107442.47933588602 0.004463313754101345 0.009265906560599557 1.7963295491586056e-07 6.745613986013932 0.137435567909314 LMLPDS(ph)PLVEEGR ddPTM_A549_PD325901_60min_R1 3 LMLPDSPLVEEGR 13 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 LMLPDS(1)PLVEEGR;LMLPDS(1)PLVEEGR;LMLPDS(1)PLVEEGR 71.548 0.0012905 4103300.0 3120.51 2776.12 2991.77 3014.35 3061.17 3054.03 2760.97 3180.8100000000004 3416.7299999999996 4045.7000000000003 3814.76 True False 3437.3018780019543 3010.073375193988 3194.809503174501 3200.539553414446 2846.1639796631966 3029.1589922404196 2866.0402242107557 3117.366249252828 3273.1367200986324 3790.2538115565176 3345.5687037560488 1.02741930666165 0.8997194921791914 0.9549376462027842 0.956650374515167 0.8507265077138683 0.9054242373918676 0.8566675737350934 0.9317896373650855 0.978349874095816 1.1329176433594754 1.0 11.70803575602218 -8.779620475901597 3.340328878405036 0.9907255404608505 0.9185188261593802 0.3349043987470264 0.0631982588776322 0.20283867988388707 4.579872501415193 0.008120677367352287 0.008788638518689544 1.6610378319630474e-09 8.779620475901597 -0.0722067143014703 LMLPDS(ph)PLVEEGRR ddPTM_A549_MK2206_60min_R1 3 LMLPDSPLVEEGRR 14 1 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 LMLPDS(1)PLVEEGRR;LMLPDS(1)PLVEEGRR;LMLPDS(1)PLVEEGRR 50.787 0.010495 6024100.0 792.22 901.27 672.03 640.62 1039.8000000000002 667.28 463.22499999999997 761.56 959.6800000000001 1242.28 1014.28 True False 925.9273680805902 947.1407933645813 767.3339592393766 797.571928758525 886.8467974147316 737.8911266953847 547.3869864184787 869.5134621796853 742.3140122940498 961.64808519907 762.4062832960849 1.21448024284055 1.2423045482650537 1.0064633202155522 1.0461245483319073 1.16322073524979 0.9678450228732184 0.7179728163466589 1.1404856980198899 0.97364624158766 1.2613328434828868 1.0 9.574416198900266 -5.610641138944082 0.743833337595146 0.9833055781429785 1.3330549799957325 0.15921301817115352 0.1392979594542697 1.4256464839875738 0.7386390023099857 0.017396874689721578 0.3734406615667703 2.4510877590048072e-06 5.610641138944082 0.34974940185275405 LMLPDS(ph)PLVEEGRR ddPTM_A549_PD325901_60min_R1 3 LMLPDSPLVEEGRR 14 1 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 LMLPDS(1)PLVEEGRR;LMLPDS(1)PLVEEGRR;LMLPDS(1)PLVEEGRR 68.944 0.001275 5151200.0 1146.96 765.37 758.0699999999999 680.47 804.08 964.37 655.08 1076.52 1096.33 1273.6799999999998 1675.56 True False 1263.3985348526749 829.8704159662482 809.5171888452296 722.5010864405025 747.6041947254093 956.5164904558544 680.009427873531 1055.0479640863969 1050.2550626902735 1193.2596274324117 1469.4767422499667 0.8597608240592101 0.5647387210059581 0.5508880580210815 0.49167235225122113 0.5087553774962962 0.6509231911975 0.4627561691329289 0.7179752722530174 0.7147136341077379 0.8120302915481129 1.0 10.52108680996221 -9.81103310587517 0.5650283743708004 0.9978609567891313 0.5778238310424377 0.478906476322546 0.11834481973316248 0.34821453578151074 0.23103385881181782 0.06489044235289174 0.027148026296120543 1.545136650680999e-10 9.81103310587517 -0.4200371257466936 LMLSTSEYS(ph)QSPK ddPTM_A549_PD325901_60min_R1 1 LMLSTSEYSQSPK 13 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LMLSTSEYS(0.614)QS(0.386)PK 108.59 2.5426e-05 6390900.0 2148.2 2246.3 2268.3 2204.6 2933.0 2906.9 2454.8 2514.8 2662.7 2481.8 2890.5 True False 2366.2836825787426 2435.6035843905347 2422.2404783959746 2340.773134990128 2726.996198300699 2883.227170179625 2548.2187573181022 2464.640341177564 2550.795978788677 2325.0987244533635 2534.9868243891783 0.9334500912638527 0.9607953623101806 0.9555238927048977 0.9233867065775193 1.0757437364424118 1.1373736314682257 1.0052197245372714 0.9722497637720209 1.0062363852338003 0.9172034750175126 1.0 11.307762533493152 -6.740038544008024 24.999634579547863 1.0153626735764012 0.9454133759078207 0.3011976834062138 0.05344139925502833 227.1173809237591 265308.3393344027 0.006920545769405368 0.014395914405722476 1.8195393657633535e-07 6.740038544008024 -0.06994929766858049 LMLSTSEYSQS(ph)PK ddPTM_A549_MK2206_60min_R1 5 LMLSTSEYSQSPK 13 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LMLSTSEYS(0.006)QS(0.994)PK;LMLSTS(0.001)EYS(0.017)QS(0.982)PK;LMLSTS(0.001)EYS(0.028)QS(0.971)PK;LMLSTSEYSQS(1)PK;LMLSTSEYSQS(1)PK 192.18 7.780800000000001e-26 17969100.0 8952.099999999999 10651.300000000001 10109.199999999999 10429.4 13705.6 9875.099999999999 9486.12 10374.4 16152.800000000001 14953.599999999999 14573.3 True False 10462.9956221684 11193.405674619338 11542.836570901149 12984.603468193565 11689.52439569854 10920.076527439138 11209.625213673831 11845.002970267511 12494.216590721218 11575.57137427376 10954.347407381434 0.9551454991392785 1.0218231409273015 1.0537219737182308 1.185337928888769 1.0671128056265329 0.9968714813701085 1.0233037895183406 1.0813061271259228 1.1405715124848208 1.0567102670555915 1.0 13.419215919543662 -8.28440823305385 23.89979295029597 1.0693551381170978 1.0474929612968937 0.037655081388335954 0.061750410348480625 1981.9376006330544 2062259.5838820166 0.012320445794164738 0.014901898612792161 5.195074344557582e-09 8.28440823305385 -0.021862176820204082 LMLSTSEYSQS(ph)PK ddPTM_A549_PD325901_60min_R1 5 LMLSTSEYSQSPK 13 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LMLSTSEYS(0.008)QS(0.992)PK;LMLSTSEYS(0.002)QS(0.998)PK;LMLSTSEYS(0.005)QS(0.995)PK;LMLSTSEYS(0.005)QS(0.995)PK;LMLSTSEYS(0.001)QS(0.999)PK 220.19 2.2286e-38 32732400.0 17280.0 16785.2 17432.2 17961.5 22999.5 20370.399999999998 20790.7 20368.8 20181.6 19345.3 19094.5 True False 19034.252879136355 18199.74771166452 18615.253920334293 19070.9410614738 21384.094463967594 20204.51021618459 21581.901465607567 19962.528304985513 19333.437535404486 18123.834456510456 16745.997550008353 1.1366449100625158 1.0868117983007493 1.1116240680642526 1.1388357728181018 1.2769674902978192 1.2065277183905065 1.288779686080678 1.1920775842329892 1.1545109497161512 1.0822785804421318 1.0 14.031528698716457 -10.234252347651957 0.8156020283693061 1.006930566316887 1.1785331443055882 0.3851723942373687 0.06394846738590432 0.3808366663621917 0.48956399689633157 0.03553321756465596 0.013353202302088994 5.831061908357527e-11 10.234252347651957 0.17160257798870115 LMPS(ph)PLK ddPTM_A549_MK2206_60min_R1 1 LMPSPLK 7 0 Q8NI77 Q8NI77 KIF18A Kinesin-like protein KIF18A 1 LMPS(1)PLK 59.8 0.029432999999999997 3248100.0 1226.5 1450.7 1193.0 1098.2 1657.4 1249.6 1257.7 1452.4 1638.5 1821.0 2038.3 True False 1433.503214953982 1524.5344335593088 1362.1853390065558 1367.2590493000712 1413.5986555445038 1381.8318425826515 1486.2078100675067 1658.2821477884547 1267.3823661468425 1409.634835260573 1532.133855781846 0.9356253107679466 0.9950399750035813 0.8890772394762038 0.8923887714773854 0.9226339136166051 0.9019002075882622 0.970024782403295 1.082335033280911 0.8272008097491579 0.9200467896071901 1.0 10.581326629337946 -5.753603108658028 24.992853609211505 0.9272329517574747 0.9653326238628841 0.02532660335377801 0.06490471446034594 550.6847750331337 1756298.7603736317 0.010555030931700134 0.03939813244526233 1.763587010185819e-06 5.753603108658028 0.03809967210540943 LMPS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 LMPSPLK 7 0 Q8NI77 Q8NI77 KIF18A Kinesin-like protein KIF18A 1 LMPS(1)PLK;LMPS(1)PLK 59.8 0.029432999999999997 6638700.0 4341.0 5277.7 5087.8 4455.5 5107.9 5069.3 4590.0 4876.1 5449.5 5666.799999999999 5862.1 True False 4781.695124324703 5722.470301089759 5433.088703426808 4730.706115825327 4749.1387252983795 5028.017301521061 4764.674961744377 4778.842360273553 5220.476466146728 5308.997280897858 5141.098862913615 0.9300920390421694 1.1130831080432992 1.0567952199129105 0.920174118796131 0.9237594630901339 0.9780043985910694 0.9267814311285374 0.9295371452096992 1.015439812645059 1.0326580800060883 1.0 12.32786103992555 -4.913956450367464 13.52077090096628 0.9939480109030151 5.2127010496044156e-05 0.07147659645274207 0.05986596038306302 289510.21317897004 940664.4869374122 0.00827568646085449 8209446.408543202 1.2191118413503923e-05 4.913956450367464 -0.993895883892519 LMPS(ph)PLKGQHTLK ddPTM_A549_MK2206_60min_R1 2 LMPSPLKGQHTLK 13 1 Q8NI77 Q8NI77 KIF18A Kinesin-like protein KIF18A 1 LMPS(1)PLKGQHTLK;LMPS(1)PLKGQHTLK 84.84200000000001 0.00014578 6257400.0 2396.8 3087.5 3031.5 2774.0 4608.1 3313.2 3799.3 3263.3 5426.5 4673.9 4467.7 True False 2801.321243866046 3244.6405622212524 3461.412284323869 3453.630124529592 3930.254594313158 3663.8006248758343 4489.583631064227 3725.882768437113 4197.406414339845 3618.062743835474 3358.246787752812 0.8341618174346753 0.9661709717267146 1.0307200462298634 1.0284027180863042 1.170329294632664 1.0909861175888997 1.3368831758991884 1.1094725920754342 1.2498802737331167 1.0773665464462543 1.0 11.713492538279693 -5.563857291592158 0.8969100792969368 1.1364738583584215 0.7620600833258339 0.5448444060087092 0.08840246769148918 1.0752391940787536 0.855616740724451 0.01684508093889322 0.35272248496485775 2.729874667487996e-06 5.563857291592158 -0.37441377503258766 LMS(ph)DVEDVSLENVHTR ddPTM_A549_MK2206_60min_R1 4 LMSDVEDVSLENVHTR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 LMS(1)DVEDVSLENVHTR;LMS(1)DVEDVSLENVHTR;LMS(1)DVEDVSLENVHTR;LMS(1)DVEDVSLENVHTR 90.71799999999999 2.5024e-06 3845410.0 880.42 688.3399999999999 693.217 533.87 1064.8600000000001 577.09 831.7700000000001 414.75699999999995 1086.3000000000002 1183.73 1106.66 True False 1029.0133717976232 723.3735658621459 791.5255944259073 664.6681739663348 908.2205046115129 638.157280758661 982.8918423947293 473.5500748900412 840.2547844646406 916.3245708638107 831.8457797377899 1.2370242139378087 0.8696005719836242 0.9515292542271572 0.7990281253525721 1.0918135629633143 0.7671581635718794 1.1815794061064435 0.569276284648954 1.010108850620726 1.1015558330447377 1.0 9.700172274113717 LMS(ph)DVEDVSLENVHTR ddPTM_A549_PD325901_60min_R1 2 LMSDVEDVSLENVHTR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 LMS(1)DVEDVSLENVHTR;LMS(1)DVEDVSLENVHTR 135.79 6.665399999999999e-11 5706500.0 476.63 260.98 679.23 702.27 596.41 553.51 449.45 462.15999999999997 478.38 621.99 747.5699999999999 True False 525.0171267235387 282.97370050938974 725.3266323417965 745.6476229291103 554.5202191028023 549.0023980756555 466.55406569847713 452.94185624249366 458.27535221126186 582.7174452505224 655.6236292366776 0.8007904280918001 0.43160997848544186 1.1063155749683273 1.1373104776550607 0.8457904724215219 0.8373743312376372 0.7116187472401988 0.6908565159096537 0.6989915124700703 0.8887987242451317 1.0 9.356724041113035 -11.000833754388763 1.3182967267677284 0.9985811499531715 0.7983360230772807 0.06338104696235913 0.18764404963877554 0.7605827003682925 2.3798270622666187 0.13316238915697975 0.03128392097255955 9.98082051192161e-12 11.000833754388763 -0.2002451268758908 LMT(ph)PKPVSIATNR ddPTM_A549_MK2206_60min_R1 1 LMTPKPVSIATNR 13 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 LMT(0.906)PKPVS(0.056)IAT(0.037)NR 41.348 0.042364 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LMT(ph)PKPVSIATNR ddPTM_A549_PD325901_60min_R1 2 LMTPKPVSIATNR 13 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 LMT(0.996)PKPVS(0.003)IAT(0.001)NR;LMT(0.955)PKPVS(0.021)IAT(0.024)NR 71.143 0.00095201 29517000.0 10848.8 11357.8 12398.400000000001 12409.900000000001 12705.5 13657.900000000001 13033.599999999999 13934.300000000001 14826.5 11324.3 13474.7 True False 11950.16218953556 12314.961666202571 13239.829981635867 13176.4313380722 11813.109511595478 13546.674590662311 13529.600780259589 13656.369455253114 14203.393765542603 10609.281765382868 11817.397323160989 1.0112346959947234 1.0421043931616316 1.120367676534582 1.1150028198042925 0.9996371610898529 1.146333174743317 1.1448883718027185 1.1556156640758717 1.2019054092143695 0.8977680512264467 1.0 13.528624709275842 -7.285050440191226 24.943153129765058 1.1099023530356107 1.0634730467439237 0.008947045129305886 0.08704115557716956 1768.0811826946551 1867829.5999954022 0.012538474482432926 0.020051033731514 5.187397875219408e-08 7.285050440191226 -0.046429306291686956 LMTGVIS(ph)PERR ddPTM_A549_MK2206_60min_R1 2 LMTGVISPERR 11 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 LMTGVIS(1)PERR;LMTGVIS(1)PERR 73.46600000000001 0.00062529 18388700.0 853.1700000000001 903.1300000000001 905.96 865.41 1185.54 1262.86 988.9 944.31 1326.15 1334.92 1281.25 True False 997.1642379961589 949.095459419879 1034.438750818424 1077.435488849731 1011.1486364753413 1396.4950069813767 1168.5703294710647 1078.1688343280878 1025.7791424263871 1033.3606448577955 963.0802642989208 1.0353905847318445 0.9854790868451425 1.074094018084203 1.1187390384684661 1.0499110759074812 1.450029721040917 1.2133675382931155 1.1195004967866788 1.0651024431209877 1.0729745828713826 1.0 9.911512228840916 -4.10923011841744 16.165591219770945 1.0782720534124264 1.0868957445734766 0.0 0.12699000930562626 0.0 0.0 0.017945298882001214 0.0 7.776244041629438e-05 4.10923011841744 0.008623691161050218 LMTGVIS(ph)PERR ddPTM_A549_PD325901_60min_R1 3 LMTGVISPERR 11 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 LMTGVIS(1)PERR;LMTGVIS(1)PERR;LMT(0.002)GVIS(0.998)PERR 90.412 0.00012509999999999998 35887800.0 4308.85 4437.889999999999 4203.110000000001 4474.74 5510.77 4755.3 4213.62 5104.38 4248.860000000001 4432.82 5157.889999999999 True False 4746.281279992284 4811.886565076312 4488.358319953664 4751.1345269281155 5123.712526324425 4716.574413414692 4373.971614881336 5002.569136591358 4070.29519000866 4152.930988690205 4523.502228558622 1.0492492410033916 1.0637524470966342 0.9922308187706683 1.0503221368903861 1.1326870790460637 1.0426820138690616 0.966943618877152 1.1059061947639157 0.899810585769431 0.9180786874539693 1.0 12.143224466885359 -8.763020172684499 24.999720335513004 0.9526883331804442 1.0486646246463944 0.4972192289088443 0.0492657829890879 31.01265887574417 490453.6918431809 0.009337278096861412 0.010202369650361906 1.7257577298509347e-09 8.763020172684499 0.09597629146595021 LMVALAK ddPTM_A549_MK2206_60min_R1 4 LMVALAK 7 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 126.05 0.010376999999999999 15292700.0 5966.879999999999 6750.610000000001 6935.32 5816.54 9449.6 6625.04 7329.61 7180.400000000001 10746.199999999999 9146.2 9224.699999999999 False True 6973.943467790153 7094.187214813409 7918.852661625275 7241.592561114407 8059.576357809424 7326.097335454364 8661.305260991414 8198.243689052753 8312.20285815514 7080.0670676882255 6933.952401231809 1.005767427326331 1.023108727073629 1.1420402395924292 1.044367215417854 1.162335114440308 1.0565543158549648 1.2491151885399072 1.1823334246708046 1.198768375836916 1.0210723492175198 1.0 12.759462217721074 -5.6967375797909625 6.600440228222485 1.1130099336068064 1.0118846914620776 0.2140013542743291 0.07579880034947659 0.2951664249716442 23.258532307994432 0.012155518623840015 0.047751465503141216 2.010307163462567e-06 5.6967375797909625 -0.10112524214472884 LMVALAK ddPTM_A549_PD325901_60min_R1 4 LMVALAK 7 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 126.05 0.006905 32924600.0 10545.6 11542.199999999999 11940.8 11897.300000000001 14465.0 13770.6 13587.6 12913.5 13001.4 13301.400000000001 13515.0 False True 11616.181548739596 12514.901701354422 12751.17449386353 12632.16920027126 13449.028301540953 13658.456799227886 14104.683553420009 12655.930112055225 12454.996371586392 12461.547333968876 11852.740678643746 0.9800418201732548 1.0558656466604182 1.075799668581173 1.0657593499056204 1.1346766681374711 1.152345872532053 1.1899934315473393 1.0677640264971513 1.0508115134947473 1.051364209496465 1.0 13.532933067898332 -9.212444935033801 1.3384275268010037 1.0148495952347065 1.0939073005434128 0.1709488618064342 0.05425581030718204 0.378320743221245 1.4038643336460859 0.012986499667033816 0.011509233793724675 6.131335275070073e-10 9.212444935033801 0.07905770530870626 LNAS(ph)PAAR ddPTM_A549_MK2206_60min_R1 2 LNASPAAR 8 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 LNAS(1)PAAR;LNAS(1)PAAR 98.04 0.0024446999999999997 102949000.0 5616.8 6252.2 5490.1 4889.2 7247.3 6406.7 6128.0 5707.6 8470.1 7030.2 7297.7 True False 6564.7785224244 6570.410274694643 6268.678734015 6087.054219484527 6181.231770440257 7084.652741576724 7241.378277883187 6516.66977879192 6551.63587397032 5442.0729373140475 5485.479683726229 1.1967555985851386 1.1977822639990952 1.1427767661982757 1.1096667147529482 1.1268352317078332 1.2915283895034304 1.3200993705921802 1.1879854004609518 1.194359700831097 0.992086973443552 1.0 12.421402068840996 -10.505495096975045 0.8091318332336743 0.9991307750407307 1.1963028338851422 0.6139950727265222 0.060815932321215564 0.3904280323145232 0.4567788373394204 0.04586504370102952 0.0128899691160835 3.1225176581000934e-11 10.505495096975045 0.19717205884441158 LNAS(ph)PAAR ddPTM_A549_PD325901_60min_R1 1 LNASPAAR 8 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 LNAS(1)PAAR 102.55 0.0022091 68140000.0 7350.0 6872.6 7643.8 6813.3 7715.3 6684.1 6542.6 7032.9 7943.2 7879.9 8292.6 True False 8096.166589215977 7451.778121391799 8162.554233903427 7234.142066873005 7173.403944340052 6629.6669057062945 6791.582223248096 6892.623292296677 7609.374927222071 7382.361769207853 7272.662771122536 1.1132327792460441 1.0246285790921688 1.1223611613499216 0.9947033561899111 0.986351790271837 0.9115872843754868 0.9338508379922881 0.9477441082054738 1.0462983320822346 1.0150837460140318 1.0 12.828267965635435 -6.279416400835799 24.109054092914455 0.9988502845850507 1.0805296117419325 0.48783164143797464 0.04581134987995575 444.09879803355716 595582.2381828722 0.007528464598930117 0.017534339468525322 5.255131636049009e-07 6.279416400835799 0.08167932715688186 LNAS(ph)PAAREEATSPGAK ddPTM_A549_PD325901_60min_R1 1 LNASPAAREEATSPGAK 17 1 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 LNAS(1)PAAREEATSPGAK 78.975 3.7438e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LNCST(ph)SPEIFR ddPTM_A549_MK2206_60min_R1 1 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.008)T(0.496)S(0.496)PEIFR 130.71 9.654400000000001e-08 6837100.0 2486.6 3192.1 2408.1 1884.8 3534.9 3025.5 2318.7 3227.3 3372.2 3839.9 4005.7 True False 2906.2772884668348 3354.564255438529 2749.604790328323 2346.5760846118874 3014.920892653715 3345.6564018356407 2739.977776261055 3684.7796581917382 2608.4020842968434 2972.4639230736293 3010.974138304146 0.9652282467307145 1.1141126098571876 0.9131944228112724 0.7793411623035514 1.0013107898534763 1.1111541475145303 0.9099971140251233 1.2237832305883225 0.8662984019404295 0.9872100478245202 1.0 11.556014601259852 LNCST(ph)SPEIFR ddPTM_A549_PD325901_60min_R1 1 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.008)T(0.496)S(0.496)PEIFR 123.2 7.5395e-06 8778700.0 3763.2 3775.3 4740.2 3660.3 4111.8 3984.1 4345.4 4048.0 3236.2 3942.6 4594.1 True False 4145.2372936785805 4093.4577804165024 5061.8984771382065 3886.388417855558 3823.0013529399303 3951.654810524146 4510.766574894118 3967.2594644054334 3100.1937681886498 3693.6635631516733 4029.054824399349 1.0288361599290354 1.0159846313401195 1.2563488703316004 0.9645906018255636 0.948858111780562 0.9807895356979309 1.1195594926079426 0.984662566609992 0.7694593157219761 0.916756838547692 1.0 11.976225721409687 -8.53118625530849 24.715404202539258 0.8903928887386111 1.0434177201029367 0.32353480405623425 0.09463502612633777 161.72382802237675 481137.0350283912 0.01904393230174644 0.021611966690927485 2.943159134272394e-09 8.53118625530849 0.15302483136432554 LNCST(ph)SPEIFRK ddPTM_A549_PD325901_60min_R1 1 LNCSTSPEIFRK 12 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.103)T(0.448)S(0.448)PEIFRK 88.28200000000001 0.00017178 11698000.0 2693.0 3191.6 3366.9 2430.6 2693.9 2942.1 3018.1 3108.5 1825.3 2595.2 3538.3 True False 2966.3913775181827 3460.567332921176 3595.398080814446 2580.732641706886 2504.6897574504796 2918.140513050145 3132.9554470676903 3046.4985289289234 1748.5889886517339 2431.3386291003985 3103.1115311317158 0.9559409475805497 1.1151927019713321 1.1586428798139885 0.8316596473622989 0.8071542812181844 0.9403917596174471 1.0096174164662044 0.9817560530342442 0.563495372663585 0.7835163527666312 1.0 11.59949983538595 -6.273547732667396 23.25185386093672 0.8320280869291641 1.0804522204017317 0.3178458900620612 0.13205353131096453 284.42675164535166 546190.2608566586 0.025355809205411146 0.05941680116465365 5.326626769346397e-07 6.273547732667396 0.24842413347256764 LNCSTS(ph)PEIFR ddPTM_A549_MK2206_60min_R1 1 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.009)T(0.023)S(0.967)PEIFR 100.38 0.00026839 4116800.0 2347.4 2737.9 1966.5 1884.8 3399.1 2539.5 2575.0 2383.4 3243.0 3339.9 3610.5 True False 2743.583731580089 2877.2474154835813 2245.3792700388885 2346.5760846118874 2899.096892760543 2808.22820441633 3042.8441686601204 2721.2542488563777 2508.4656780068394 2585.4142703387083 2713.91320526927 1.0109327469475484 1.060184021322858 0.8273585410466751 0.8646466954270426 1.0682349336492136 1.0347524006898747 1.1212017255202584 1.0027049662357863 0.9242984164476822 0.9526517890546127 1.0 11.406158866756398 LNCSTS(ph)PEIFR ddPTM_A549_PD325901_60min_R1 1 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.017)T(0.044)S(0.938)PEIFR 104.3 0.00019637 8765600.0 4149.3 4198.9 4600.7 4324.7 4334.9 3935.6 4170.9 4423.1 3443.0 3830.7 5057.4 True False 4570.533881446781 4552.756039040832 4912.93116825656 4591.826896893675 4030.4315785931485 3903.5497784440217 4329.625881904057 4334.877800645175 3298.302683355022 3588.8289482486502 4435.371861500029 1.0304736613225123 1.0264654647245528 1.107670635443636 1.035274389674451 0.9087020670303096 0.8800952660424404 0.9761584861657554 0.9773425850203984 0.743636111322478 0.8091382324446004 1.0 12.114839349786399 -6.756717281623652 4.1341482512815695 0.8925637861691873 1.0549480412648098 0.49468005400088877 0.07338268250873264 0.17680114326792956 6.885314251192035 0.014291892560632303 0.029420745071035658 1.750986180134234e-07 6.756717281623652 0.1623842550956225 LNCSTS(ph)PEIFRK ddPTM_A549_PD325901_60min_R1 1 LNCSTSPEIFRK 12 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.047)T(0.263)S(0.69)PEIFRK 76.358 0.00048667 14566000.0 2238.3 2923.3 2889.6 2245.0 2184.9 2445.8 2900.1 2808.3 2076.2 2173.1 2649.2 True False 2465.53056825063 3169.656750322242 3085.705632576381 2383.6685512350705 2031.440161495807 2425.8822157024065 3010.4648924956114 2752.2862534312694 1988.9445341799867 2035.8900951364346 2323.3651946624495 1.0611894220997982 1.3642524892789167 1.3281190747219953 1.0259551777357938 0.8743524979037766 1.044124368082759 1.2957346952651527 1.1846119842692813 0.8560619478802818 0.8762677945824264 1.0 11.182000224482119 -6.856441080672064 0.38573584249017395 0.9394748161477419 1.2917109000978322 0.22051152537086582 0.15628243358848987 2.132790463262419 0.4726050013911501 0.056421475309297565 0.2943624265959387 1.3917425952546855e-07 6.856441080672064 0.3522360839500903 LNDGHFMPVLGFGTYAPAEVPK ddPTM_A549_MK2206_60min_R1 2 LNDGHFMPVLGFGTYAPAEVPK 22 0 B4DK69;P52895;S4R3P0;P52895-2;Q04828 B4DK69;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 145.55 7.529699999999999e-27 30958000.0 4677.0 5425.6 5426.799999999999 4624.5 6803.5 5436.1 5095.7 4817.2 7886.6 7752.5 8257.2 False True 5466.363258328397 5701.739865388701 6196.401842180035 5757.50270760169 5802.714162541952 6011.344493808865 6021.522730190823 5500.052852056278 6100.297692312285 6001.204865654916 6206.709352873405 0.8807184205907332 0.9186413510323426 0.9983392954128586 0.9276256354643457 0.9349099228974814 0.9685236011616856 0.9701634775927038 0.8861463521745256 0.9828553820533168 0.9668899451327859 1.0 12.599612873792724 LNDGHFMPVLGFGTYAPAEVPK ddPTM_A549_PD325901_60min_R1 2 LNDGHFMPVLGFGTYAPAEVPK 22 0 B4DK69;P52895;S4R3P0;P52895-2;Q04828 B4DK69;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 131.43 1.0165e-21 51718000.0 8972.8 9590.6 7646.3 8863.6 10664.900000000001 10686.0 9986.099999999999 10142.5 11379.3 9753.9 10931.6 False True 9883.712050573753 10398.833520213622 8165.223898937145 9411.084441303856 9915.834215907655 10598.976758932002 10366.126500103599 9940.199880862674 10901.067593581696 9138.03708938901 9587.082501121866 1.0309405441558657 1.084671329259633 0.8516901672622159 0.9816421669681663 1.034291111477065 1.1055476739343513 1.0812597574799812 1.0368326213631194 1.1370578684710464 0.9531614115472242 1.0 13.226876132070265 -6.9271668555256145 4.116958069501903 1.0679404827035341 0.9850640872023861 0.13597765037870824 0.07072966499081876 0.25944568248738875 8.663188390474772 0.010361136489678154 0.020042197616074543 1.1825871195906744e-07 6.9271668555256145 -0.082876395501148 LNDS(ph)PTLK ddPTM_A549_MK2206_60min_R1 2 LNDSPTLK 8 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LNDS(0.764)PT(0.236)LK;LNDS(0.859)PT(0.141)LK 106.58 0.0018946999999999998 110289000.0 13926.099999999999 16283.8 15633.2 14447.599999999999 20739.0 16135.5 15328.5 14409.2 23741.0 23061.0 24504.0 True False 16276.48521954396 17112.57586626669 17850.222834666634 17987.262648577413 17688.320572787172 17842.94790012194 18113.490034682178 16451.74822632429 18363.701406586606 17851.50408343992 18418.98052400449 0.8836800276938058 0.9290729117154322 0.969121109140833 0.9765612502350799 0.9603311404632254 0.9687261396942226 0.9834143649305571 0.8931953755466319 0.9969987960329377 0.969190670470333 1.0 14.168905591159703 -2.0000000000000004 0.20068221449716017 1.0024953394065323 0.5485277280950849 0.2789261204342234 0.03156484505678158 33.51045560034598 0.3730409686329056 0.024632415780139683 4.850159711554389 0.00999999999999999 2.0000000000000004 -0.45396761131144747 LNDS(ph)PTLK ddPTM_A549_PD325901_60min_R1 2 LNDSPTLK 8 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LNDS(0.963)PT(0.037)LK;LNDS(0.998)PT(0.002)LK 143.7 0.00094942 167186000.0 23482.0 24000.0 24982.0 23825.2 28204.0 27614.0 27737.0 27457.0 27670.0 26865.0 29765.0 True False 25865.87535346526 26022.564228007323 26677.428748969796 25296.828493044883 26223.048338517867 27389.120739392507 28792.54671326877 26909.348595400174 26507.12612501696 25168.739315190414 26104.09369588095 0.9908742917800176 0.9968767554689518 1.0219634153848947 0.9690751491991676 1.0045569344035754 1.0492270315331547 1.102989709150946 1.0308478397641625 1.0154394338999635 0.9641682874882521 1.0 14.67198845039175 -7.010096926271419 24.014770454866376 1.020294501774444 0.9955525682225623 0.15368801364444307 0.03410515592688878 551.2431313393987 1311095.422912378 0.004990720258856692 0.009040495156529606 9.770191445237944e-08 7.010096926271419 -0.0247419335518817 LNEAQPSTIATSMRDS(ph)LIDSLT ddPTM_A549_PD325901_60min_R1 1 LNEAQPSTIATSMRDSLIDSLT 22 1 P56537-2;P56537 P56537-2 EIF6 Eukaryotic translation initiation factor 6 1 LNEAQPS(0.011)T(0.01)IAT(0.068)S(0.068)MRDS(0.536)LIDS(0.154)LT(0.154) 54.605 0.0015382999999999998 2618900.0 759.87 675.19 618.85 945.46 742.85 689.36 765.08 601.42 620.09 826.48 1003.9 True False 837.0114430132714 732.0906308795113 660.8488824473606 1003.858916904548 690.6747786933767 683.7460807165792 794.1955380678405 589.4242062951375 594.0297737210614 774.2959117520412 880.4266642464264 0.9506884298304222 0.8315180134919259 0.7506007135903743 1.1401959500667436 0.7844773525623944 0.7766076477270372 0.9020575708569746 0.6694756420168586 0.6747067051058733 0.8794553177404907 1.0 9.782059028545271 -5.258588101239033 22.01859157530723 0.8395770992727677 0.950688508687425 0.053713075748538675 0.13235658362049288 149.03403818363006 1150508.9148681285 0.020627535141537555 0.19360877335578217 5.513303478317086e-06 5.258588101239033 0.11111140941465736 LNELLVK ddPTM_A549_MK2206_60min_R1 2 LNELLVK 7 0 I3L0K7;Q12931-2;Q12931;I3L253 I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial 0 ; 78.49600000000001 0.046 462150.0 644.11 995.61 578.17 566.75 905.85 650.08 760.55 823.58 1241.0 942.72 841.36 False True 752.8200210224298 1046.2822964058626 660.163199877134 705.6037754423745 772.6006649722389 718.8710341118203 898.732090281341 940.3249871079698 959.9154814697777 729.7588972525252 632.4270916452994 1.1903664959448852 1.6543919611095288 1.0438566098736812 1.1157076993755934 1.221643846664236 1.1366860205840195 1.4210841093844229 1.4868512110410301 1.5178278953428392 1.1539020179448842 1.0 9.30475536035709 -11.045141596186488 1.3789655985370135 1.0019353264037556 1.331937504554523 0.164884521981556 0.18824011566382295 0.45054054369861685 1.5420094465228193 0.13526423051619438 0.030996884620118875 9.012772397285693e-12 11.045141596186488 0.3300021781507674 LNELLVK ddPTM_A549_PD325901_60min_R1 2 LNELLVK 7 0 I3L0K7;Q12931-2;Q12931;I3L253 I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial 0 ; 98.39200000000001 0.031911 2169600.0 2185.8 2362.9 2353.7 2679.2 2496.7 2644.8999999999996 2642.3 2237.56 2622.3999999999996 2630.7 2576.4 False True 2407.7008068990876 2562.029875598272 2513.43623594789 2844.688099095322 2321.3404051474113 2623.3608113137993 2742.8541724220413 2192.9301104681376 2512.1896476416514 2464.597153041928 2259.5191331452274 1.0655810661570246 1.133882797456976 1.112376611057598 1.2589794250317081 1.027360366679493 1.1610261550040994 1.2139105760100453 0.9705295601615913 1.111824905923549 1.090761798335044 1.0 11.141800058168842 -10.77648809731351 0.337123035174033 0.9518198529616184 1.1349119570783077 0.09174455920755387 0.07949207976518584 3.209198968540048 0.44655702059693275 0.22052758373681475 0.02922292770668857 1.6730614892803338e-11 10.77648809731351 0.1830921041166893 LNELPST(ph)LQR ddPTM_A549_PD325901_60min_R1 2 LNELPSTLQR 10 0 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 LNELPS(0.197)T(0.803)LQR;LNELPS(0.008)T(0.992)LQR 96.82 0.00055991 8674600.0 3097.6 3188.4 3537.5 3121.7 3693.7 3205.3 3012.9 3213.5 3156.7 3524.6000000000004 4095.3 True False 3412.066071667405 3457.097657690774 3777.576022715584 3314.520319104907 3434.2672545732325 3179.1970995138267 3127.55755822214 3149.404221558018 3024.0348767199516 3302.0561544880015 3591.604062245632 0.9500117531145759 0.9625497682306444 1.051779638636914 0.9228523694876656 0.9561931646847438 0.8851747142545691 0.8707968651384838 0.8768795688433622 0.8419733423592325 0.9193820079442186 1.0 11.810412601077722 -6.478996742351782 21.19634469751828 0.9154546000667005 0.9858507094131809 0.3495310301810569 0.04747791949103692 104.00508000671253 50236.41836677586 0.009156916316396254 0.021275031021387097 3.318969471063308e-07 6.478996742351782 0.07039610934648033 LNEQAS(ph)EEILKVEQK ddPTM_A549_MK2206_60min_R1 1 LNEQASEEILKVEQK 15 1 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105 Q01105-2;Q01105 SET Protein SET 1 LNEQAS(1)EEILKVEQK 77.391 0.00015716 2120300.0 1664.3 2126.6 2125.4 1882.0 3017.8 1855.3 1909.8 2218.3 2963.8 3062.0 2957.7 True False 1945.193151771638 2234.8348565569904 2426.8136794002803 2343.09008448619 2573.885617655488 2051.626614551533 2256.7859391483853 2532.7508182588313 2292.504032216056 2370.2920733486426 2223.2214616327174 0.8749434931880796 1.005223678848325 1.0915753204442558 1.053916636251542 1.1577279466190677 0.9228170247352837 1.0150972262974731 1.1392256066108672 1.0311631440137583 1.0661520295004339 1.0 11.118435951284072 -5.2901330936675945 3.830441505020388 1.0335293801016352 0.8634436797256848 0.3631017478376092 0.06416708228296067 0.1945049547379551 5.462483810090485 0.008582084954640273 0.08785026328446127 5.127042368314842e-06 5.2901330936675945 -0.1700857003759504 LNEQAS(ph)EEILKVEQK ddPTM_A549_PD325901_60min_R1 2 LNEQASEEILKVEQK 15 1 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105 Q01105-2;Q01105 SET Protein SET 1 LNEQAS(1)EEILKVEQK;LNEQAS(1)EEILKVEQK 134.9 4.1818e-10 7159700.0 4868.1 5240.799999999999 4397.7 4191.7 5494.700000000001 4484.4 4561.1 4595.4 4827.4 5156.0 4926.8 True False 5362.305928294195 5682.4606085892 4696.154367518396 4450.611788958594 5108.771227685939 4447.880533198084 4734.675156429691 4503.741141978438 4624.521165735702 4830.449280071537 4320.834833558415 1.2410346923346935 1.3151302531759634 1.0868627356558518 1.0300351576487596 1.1823574435217699 1.0294030446739018 1.0957778621059806 1.0423312427958258 1.0702841797651375 1.1179435146548822 1.0 12.077094368781026 -2.0000000000139737 0.30537642194380854 1.025619811386598 3.399433131411807 0.5115216200653443 0.0654388166319841 20.974685731508522 0.2623222243820706 0.018509463157445533 27.829858630347726 0.009999999999678244 2.0000000000139737 2.373813320025209 LNES(ph)DEQHQENEGTNQLVMGIQK ddPTM_A549_MK2206_60min_R1 2 LNESDEQHQENEGTNQLVMGIQK 23 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 LNES(1)DEQHQENEGTNQLVMGIQK;LNES(1)DEQHQENEGTNQLVMGIQK 155.22 2.7123e-33 8541100.0 2312.7 2891.2 2660.9 2116.1099999999997 3409.6 2329.4 2185.2 2646.0 3637.2 3871.2 3935.6 True False 2703.0272199136357 3038.3497306863424 3038.2556316534315 2634.5570449957886 2908.0523566698093 2575.895561869423 2582.222554313045 3021.0786030351496 2813.3800074148867 2996.693231334835 2958.2819029657235 0.9137152268023575 1.0270656517353365 1.0270338430585446 0.8905699765646419 0.9830207032515873 0.8707403980962896 0.8728791369491619 1.0212274225814895 0.9510182260164015 1.0129843367295739 1.0 11.53054382209983 -10.54062030430936 0.6957425816399813 1.0022308330577934 0.9509772105936167 0.12372269968099037 0.05663802199906678 1.7066087366088678 1.3754445071681303 0.049561026976436925 0.011572928849097696 2.8799151713491456e-11 10.54062030430936 -0.05125362246417664 LNES(ph)DEQHQENEGTNQLVMGIQK ddPTM_A549_PD325901_60min_R1 2 LNESDEQHQENEGTNQLVMGIQK 23 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 LNES(1)DEQHQENEGTNQLVMGIQK;LNES(1)DEQHQENEGTNQLVMGIQK 151.31 3.5961999999999997e-28 10393500.0 4359.2 4238.299999999999 4609.200000000001 4830.0 4890.299999999999 4783.9 4432.7 5385.9 4630.2 5331.1 5036.2 True False 4801.742774926569 4595.476415315145 4922.00802937121 5128.3381302741145 4546.822198619132 4744.941504496992 4601.388824166511 5278.473999343188 4435.608795954228 4994.493436188781 4416.779327102156 1.087159312094722 1.04045868606486 1.1143884864631746 1.1611035441154385 1.0294429179920785 1.0742989751335716 1.0417973105270526 1.1950957040016734 1.004263167221539 1.1307998580643746 1.0 12.108779038333259 -8.937786142904383 24.99999958749464 1.0018800359820006 1.0903777823270027 0.0 0.061793106677507724 44.20815017652516 17764.405885150838 0.007915059787172557 0.008426134999367984 1.1540213859416614e-09 8.937786142904383 0.08849774634500207 LNES(ph)VMVFTK ddPTM_A549_PD325901_60min_R1 4 LNESVMVFTK 10 0 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 LNES(1)VMVFTK;LNES(0.993)VMVFT(0.007)K;LNES(0.992)VMVFT(0.008)K;LNES(1)VMVFTK 79.633 0.00059768 11329600.0 8087.2 9065.8 9768.4 9104.2 11014.0 10207.9 10569.1 11093.8 10479.4 11144.1 11088.900000000001 True False 8908.206590518026 9829.806782427862 10431.342366161101 9666.545756861615 10240.41463623727 10124.770246818462 10971.312884133435 10872.525456082263 10038.987261095148 10440.459624135994 9725.035598328723 0.9160076074219131 1.0107733471039577 1.0726276794250253 0.9939856424302282 1.0529950798326246 1.0411036694362779 1.1281514368974535 1.1179933837929334 1.0322828291569832 1.0735651832400717 1.0 13.247487815731438 -5.298322808421417 3.4930377886516646 1.0357429435294003 0.9058867176273567 0.40549236408210954 0.04424427656718089 0.2288924235840694 4.817000641083366 0.0066633758361543905 0.07354800247124453 5.0312649893137e-06 5.298322808421417 -0.1298562259020436 LNFDMT(ph)ASPK ddPTM_A549_MK2206_60min_R1 1 LNFDMTASPK 10 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 LNFDMT(0.802)AS(0.198)PK 61.343999999999994 0.0035732 8685500.0 2555.2 2526.7 2599.8 2038.0 2826.3 2156.7 1640.2 1984.1 3530.5 3275.8 3036.8 True False 2986.4552913578627 2655.2982375917204 2968.490732899617 2537.3100914892966 2410.55501397697 2384.9205624984043 1938.2031089073105 2265.3522510514113 2730.84738705 2535.7945048580937 2282.6787485837754 1.3083116900311644 1.1632378140108968 1.3004417440436304 1.1115493553630795 1.05602026368035 1.044790277203072 0.8490914939782108 0.9924095768871928 1.1963345208975544 1.1108854044535863 1.0 11.156512121694492 -6.419035787338648 4.27684485912835 1.0629421564920079 1.2470233820053844 0.5223286206125368 0.08999653976058591 0.1940090245412759 6.018591321873715 0.015361166385665074 0.036768353987259535 3.810344235709079e-07 6.419035787338648 0.18408122551337658 LNFDMT(ph)ASPK ddPTM_A549_PD325901_60min_R1 1 LNFDMTASPK 10 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 LNFDMT(0.601)AS(0.399)PK 61.931999999999995 0.0034371000000000002 17554000.0 4761.3 4335.4 4499.8 5199.8 5681.0 4857.3 4690.2 4967.3 4338.7 5286.9 5543.5 True False 5244.663670916199 4700.759373087625 4805.183487495572 5520.97983639738 5281.986158386044 4817.743759232685 4868.688127575918 4868.223304728535 4156.359527235672 4953.084231732002 4861.684643141815 1.0787749629780363 0.9668992783640953 0.9883782762985364 1.1356104399296252 1.0864518260840161 0.9909617988136857 1.0014405468367806 1.0013449374171037 0.8549216644684848 1.0187999829892547 1.0 12.247240599556726 -8.178357410861084 1.7149417645412577 0.9329290386007548 1.041788003856398 0.18765865949908123 0.06279685984185365 0.31929258949984624 1.8392677925700371 0.012291254293501676 0.016355010580853264 6.631970551911591e-09 8.178357410861084 0.1088589652556432 LNFDMTAS(ph)PK ddPTM_A549_MK2206_60min_R1 5 LNFDMTASPK 10 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 LNFDMT(0.058)AS(0.942)PK;LNFDMT(0.115)AS(0.885)PK;LNFDMT(0.012)AS(0.988)PK;LNFDMT(0.188)AS(0.812)PK;LNFDMT(0.033)AS(0.967)PK 142.97 4.6974e-08 39854100.0 16863.300000000003 19442.7 19430.4 17216.7 23044.600000000002 18891.199999999997 17009.5 17704.0 26762.799999999996 25737.899999999998 27134.9 True False 19709.412771898504 20432.25038351389 22185.922892735125 21434.79227288703 19654.76986699703 20890.254245036318 20099.90597546574 20213.59621622609 20701.068531409648 19923.69051425213 20396.555444858383 0.9663108472007662 1.0017500473916787 1.087728903672694 1.0509025570928139 0.9636318210755364 1.0242050086110195 0.9854559035620192 0.9910298957524021 1.0149296329654538 0.9768164319762406 1.0 14.3160379110494 -6.732454846350934 24.99963607861498 1.0031229012979257 1.0292539837875991 0.1510111537378963 0.032904593347767526 348.6990244702387 300757.1289789045 0.004522569848722742 0.009413509971386826 1.8515913943760112e-07 6.732454846350934 0.02613108248967344 LNFDMTAS(ph)PK ddPTM_A549_PD325901_60min_R1 4 LNFDMTASPK 10 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 LNFDMT(0.262)AS(0.738)PK;LNFDMT(0.036)AS(0.964)PK;LNFDMT(0.008)AS(0.992)PK;LNFDMT(0.001)AS(0.999)PK 146.07 3.8822999999999996e-08 68927000.0 24074.9 23068.0 24999.4 23972.3 29878.0 25810.9 24836.300000000003 26528.4 29223.8 27493.4 30136.800000000003 True False 26518.966124995346 25012.021317153034 26696.00961760451 25453.01452595656 27779.472353504356 25600.70458797663 25781.458987444836 25999.270250872796 27995.625314502027 25757.462031947005 26430.16465291535 1.0033598531543844 0.946343757052384 1.0100583923021393 0.9630289807199137 1.0510518083526268 0.9686169164728519 0.975455859848419 0.9836968703108315 1.059230076018993 0.9745479216719846 1.0 14.689897792164366 -8.732593840836254 24.96237128033956 1.0279697621166353 0.9873130882276497 0.02953071729749568 0.03333344454592742 208.64971792407923 180561.2924941201 0.005350352916864293 0.006066204386799787 1.8509988936092737e-09 8.732593840836254 -0.04065667388898553 LNGDTEEGFNRLS(ph)DEFSK ddPTM_A549_MK2206_60min_R1 1 LNGDTEEGFNRLSDEFSK 18 1 Q9BQ39;A0A087WVC1 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 LNGDT(0.382)EEGFNRLS(0.616)DEFS(0.002)K 92.426 1.2947999999999999e-06 17747000.0 4177.0 4321.8 4439.9 3658.1 5662.0 4562.3 3874.6 4695.8 6501.8 6749.8 5800.8 True False 4881.975482154739 4541.761160099694 5069.54458227595 4554.334664218347 4829.127300406047 5045.079557790359 4578.564666365243 5361.444030284371 5029.1526812410975 5225.015492060306 4360.30126606453 1.119641782587435 1.0416163661551177 1.1626592459863583 1.0444999981225942 1.1075214774699877 1.1570483895356818 1.0500569540915485 1.229604034934825 1.1533956885920067 1.198315247784757 1.0 12.090212103160122 -10.835440138648142 1.129867593102773 1.0012375993293676 1.1194228937878914 0.0 0.07982298651366007 0.39181347810718775 0.9026218172657985 0.0353548767157111 0.009078451025107535 1.460696071860645e-11 10.835440138648142 0.11818529445852377 LNGDTEEGFNRLS(ph)DEFSK ddPTM_A549_PD325901_60min_R1 2 LNGDTEEGFNRLSDEFSK 18 1 Q9BQ39;A0A087WVC1 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 LNGDTEEGFNRLS(0.999)DEFSK;LNGDTEEGFNRLS(0.995)DEFS(0.005)K 118.08 1.1743999999999998e-10 29328000.0 11585.1 12304.7 13283.7 12707.1 14701.400000000001 12794.3 13495.5 14989.9 12403.5 15477.7 15829.3 True False 12761.210823500136 13341.66025234841 14185.211763377236 13491.988707082037 13668.824381076687 12690.107462736636 14009.078637520961 14690.91468515094 11882.22402933313 14500.43538055919 13882.396450200184 0.919236881706841 0.9610487857920255 1.0218128991102746 0.9718774964741396 0.9846156195085167 0.9141150455009261 1.0091253831984428 1.058240537781148 0.8559202348065624 1.0445196139280473 1.0 13.760969014352506 -8.763470176760755 24.99977227267613 0.9319623412218533 0.9794270999100769 0.0 0.06051370178151755 93.37327531472093 1149450.3797210145 0.010850711184731474 0.011833112350789278 1.7239704729560937e-09 8.763470176760755 0.04746475868822364 LNGHQLENHALK ddPTM_A549_PD325901_60min_R1 1 LNGHQLENHALK 12 0 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 0 66.262 0.0053281000000000005 1721200.0 495.91 490.53 474.29 568.26 583.05 441.28 480.19 686.16 462.69 671.24 732.79 False True 546.2544181303531 531.8686846151844 506.47817153746223 603.3601295879023 542.098579413305 437.68636198591776 498.46389322005024 672.4740005178934 443.24474834781705 628.8577918454647 642.6614755385388 0.8499878068350086 0.8276031859066829 0.7880948070102423 0.9388459594256795 0.8435212005808129 0.6810527449449875 0.7756243562014457 1.0463891583891383 0.689701756241707 0.9785210655710974 1.0 9.327915182119199 -11.101802928764744 1.4368538485487952 1.0000775453264417 0.8117002192464453 0.2757465474570395 0.09911001478592009 0.41347764382621555 1.5249410657859355 0.07429352125763504 0.016152155969785625 7.910374982577554e-12 11.101802928764744 -0.18837732607999635 LNGPGENVS(ph)EDEAQSSNQR ddPTM_A549_MK2206_60min_R1 2 LNGPGENVSEDEAQSSNQR 19 0 A0A3B3ISF0;Q659C4-9;Q659C4;G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;A0A3B3ISF8;Q659C4-3;Q659C4-2;D6RJB0 A0A3B3ISF0 LARP1B La-related protein 1B 1 LNGPGENVS(1)EDEAQSSNQR;LNGPGENVS(1)EDEAQSSNQR 314.1 2.779599999999999e-163 39567000.0 2529.0 2943.1000000000004 2382.5 2834.5 3478.5 2632.1000000000004 2927.1 2636.6 4351.8 3116.0 4202.799999999999 True False 2955.8333718863623 3092.8912190035194 2720.3743253840075 3528.952627245539 2966.8172579410875 2910.627074953424 3458.9161810038954 3010.346124248857 3366.1242483965984 2412.0934358440127 3159.12876862088 0.9356482715254224 0.979032969382164 0.8611153658581601 1.1170651422310038 0.939125143428786 0.9213385360749511 1.09489559759664 0.9529039000088072 1.0655229637461352 0.7635312177847736 1.0 11.625311028351675 -7.747540453889254 24.999961321513986 1.0289935447227467 0.9616506831648066 0.0 0.10451174171592108 293.96306317884233 528748.7648202414 0.00983746634486339 0.014550119075707973 1.7883789364936276e-08 7.747540453889254 -0.06734286155794011 LNGPGENVS(ph)EDEAQSSNQR ddPTM_A549_PD325901_60min_R1 2 LNGPGENVSEDEAQSSNQR 19 0 A0A3B3ISF0;Q659C4-9;Q659C4;G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;A0A3B3ISF8;Q659C4-3;Q659C4-2;D6RJB0 A0A3B3ISF0 LARP1B La-related protein 1B 1 LNGPGENVS(1)EDEAQSSNQR;LNGPGENVS(1)EDEAQSSNQR 423.23 0.0 62221000.0 6382.3 5720.7 6592.700000000001 7549.5 7895.3 6839.5 7323.2 7623.6 6506.200000000001 7115.3 8214.7 True False 7030.226397599069 6202.803465798392 7040.120267125659 8015.8154688415 7340.761365306342 6783.801379628994 7601.888383408807 7471.541317401493 6232.76703991996 6666.038743695308 7204.343977273749 0.9758315843574463 0.8609810255264411 0.9772049043374196 1.1126364168795317 1.0189354351295445 0.9416265243620564 1.0551812083638872 1.0370883651544989 0.8651401237338682 0.925280464775622 1.0 12.814651350201084 -8.741841587204261 24.99625214560753 0.9363161516093026 0.996834055918825 0.16201977251384814 0.06775440105402637 408.58884575313124 521139.4797031227 0.013372565246716088 0.015152403259643114 1.8120009156286266e-09 8.741841587204261 0.06051790430952242 LNGPQDHSHLLYS(ph)TIPR ddPTM_A549_PD325901_60min_R1 2 LNGPQDHSHLLYSTIPR 17 0 O60716-3;O60716-5;O60716;C9JZR2;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;E9PKL1;O60716-8;O60716-7;O60716-6;O60716-4;O60716-15;O60716-16;O60716-14;O60716-12 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 LNGPQDHSHLLYS(0.5)T(0.5)IPR;LNGPQDHSHLLYS(0.5)T(0.5)IPR 192.18 2.0363e-40 52669000.0 5257.3 6746.9 6208.700000000001 7035.8 6853.7 6194.4 6141.9 6586.9 7201.299999999999 7384.9 8743.7 True False 5791.017225780298 7315.484941247607 6630.059717946073 7470.385386538847 6372.319755981415 6143.954860146775 6375.633365476639 6455.519112176911 6898.6544041953275 6918.616153685082 7668.2803308810435 0.755191121855471 0.9539928935288543 0.864608416993581 0.9741930477495391 0.8309972354974235 0.8012167780831335 0.8314293544800694 0.8418470417910775 0.8996351341530455 0.9022382927007796 1.0 12.904687363527742 -9.907701467561468 0.7956308888928577 0.9910165708178359 0.8618181548848086 0.18402108341525147 0.06548490753117182 0.40608842801099154 0.5278090425396442 0.02536692037547875 0.012396024178208124 1.236797311258063e-10 9.907701467561468 -0.12919841593302728 LNGPQDHSHLLYST(ph)IPR ddPTM_A549_MK2206_60min_R1 2 LNGPQDHSHLLYSTIPR 17 0 O60716-3;O60716-5;O60716;C9JZR2;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;E9PKL1;O60716-8;O60716-7;O60716-6;O60716-4;O60716-15;O60716-16;O60716-14;O60716-12 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 LNGPQDHSHLLYS(0.123)T(0.877)IPR;LNGPQDHSHLLYS(0.033)T(0.966)IPR 162.09 9.4893e-23 72904000.0 1924.0099999999998 1753.88 2208.01 1783.1 2259.83 2318.1000000000004 1730.54 2048.88 3004.2 3272.5 3450.8 True False 2248.7358504717586 1843.1450005728282 2521.139019597541 2219.9595800464017 1927.4120005786997 2563.3998033697567 2044.9567175274117 2339.315014431843 2323.7534967216006 2533.2399771500423 2593.871122765046 0.8669420121669823 0.7105769382281608 0.9719600166218076 0.85584806452525 0.7430639030840105 0.988252570018665 0.7883802319937562 0.901862468763734 0.8958631276346906 0.9766252281839001 1.0 11.340891085313118 -11.699986991733851 0.17587729848400524 1.175067778111302 0.8052828954312758 0.3052905602250574 0.07995006275171626 12.50358137307151 0.4066944935937089 1.0576328284637537 0.12485016427228356 1.9953220792371895e-12 11.699986991733851 -0.3697848826800261 LNGTDPEDVIR ddPTM_A549_MK2206_60min_R1 2 LNGTDPEDVIR 11 0 J3QRS3;P19105;O14950;P24844;J3KTJ1 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 0 ; 93.05799999999999 0.00080759 3272200.0 2030.5099999999998 2150.4 1986.74 1721.26 2610.3 1958.84 1558.68 1619.73 2805.6 2573.4 2430.1 False True 2373.2104467967483 2259.8461748989725 2268.4896063854862 2142.9687772702982 2226.3283278435 2166.123148627242 1841.8719801192822 1849.3316877150883 2170.1360796225686 1992.0671526960798 1826.639102651948 1.2992224043333345 1.2371607350450817 1.2418926120064175 1.1731757927217792 1.218811271811315 1.1858517347419228 1.0083392923348782 1.0124231354897608 1.1880486279265157 1.0905641677132392 1.0 10.834975906998606 -7.58911741905708 5.632748942534695 1.0787735417360484 1.2287593730014805 0.6753207912060606 0.057326321338633295 0.13893610305200538 8.35594706313482 0.011942155321371264 0.017848460719402624 2.575624697980023e-08 7.58911741905708 0.14998583126543208 LNGTDPEDVIR ddPTM_A549_PD325901_60min_R1 1 LNGTDPEDVIR 11 0 J3QRS3;P19105;O14950;P24844;J3KTJ1 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 0 110.38 0.00023433 4958000.0 2188.6 2303.8 2158.5 1933.8 2620.7 2201.3 2195.7 2410.1 2593.9 2291.9 2708.5 False True 2410.7850608378367 2497.949311186804 2304.988790114936 2053.2464340215497 2436.6310729241864 2183.3733426386893 2279.2585650331416 2362.0286648131246 2484.8874035302324 2147.189042861898 2375.371670596123 1.0149085680696135 1.0516035625531894 0.9703697398801074 0.8643895435135283 1.0257893967021547 0.9191712478791794 0.9595376560423234 0.9943827713581977 1.0461046724981045 0.9039381371097349 1.0 11.213937551947328 -8.532325317847425 6.130743890345764 1.0217843176463324 0.9714174079593209 0.0 0.060724788040946914 0.20953543472809738 31.439729113599757 0.008539429742514494 0.009869442685918505 2.9354499647500918e-09 8.532325317847425 -0.05036690968701152 LNHQEFK ddPTM_A549_PD325901_60min_R1 2 LNHQEFK 7 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 76.035 0.0192 3566600.0 2122.0 2046.11 2540.9 2382.2 2806.3 2425.1 2483.3999999999996 2836.3999999999996 2535.0 2908.7 2912.4 False True 2337.4238778661656 2218.5428705236695 2713.3407536729396 2529.343083631261 2609.1951692094285 2405.350789639342 2577.907145968622 2779.8257768872445 2428.462765699964 2725.044185598153 2554.1932632247167 0.9151319563481756 0.8685884903332326 1.0623083197108178 0.9902708303434792 1.0215339640804122 0.9417262288925395 1.0092842946089233 1.088338074064788 0.9507748691788438 1.0668903660632687 1.0 11.318651975461202 -5.743570763162647 24.998442686191876 0.9917581063927405 0.8918601747265051 0.4297597695326265 0.04906375278025964 172.8910751882126 241873.109070876 0.00609068516989886 0.023488404617340638 1.8048006421983553e-06 5.743570763162647 -0.0998979316662354 LNHS(ph)PPQSSSR ddPTM_A549_MK2206_60min_R1 2 LNHSPPQSSSR 11 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 LNHS(1)PPQSSSR;LNHS(1)PPQSSSR 88.706 9.3445e-05 81701000.0 2126.7200000000003 2020.8 1999.66 1712.96 2962.9 2130.95 1700.8999999999999 2198.8 3079.3 3214.9 2964.0 True False 2485.658342688083 2123.6500884653283 2283.24185666207 2132.6352768976963 2527.0613349298965 2356.4457145898714 2009.9315131937856 2510.486633542588 2381.8434666316575 2488.651857154981 2227.956997761562 1.1156671090085826 0.9531827098094661 1.024814149894299 0.9572156370344509 1.1342504983125106 1.0576710937228153 0.9021410714897875 1.1268110812124672 1.0690706638524468 1.1170107231222777 1.0 11.12150567186658 LNHS(ph)PPQSSSR ddPTM_A549_PD325901_60min_R1 2 LNHSPPQSSSR 11 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 LNHS(1)PPQSSSR;LNHS(1)PPQSSSR 103.67 6.3894e-05 138081000.0 5228.9 4984.0 3989.3999999999996 4926.4 5521.700000000001 5280.7 5043.299999999999 4841.6 5969.3 5860.3 6263.9 True False 5759.734078687267 5404.019171349522 4260.1446742110365 5230.692539333832 5133.874840830883 5237.695730010506 5235.225541299651 4745.030489838275 5718.43107979992 5490.279657874947 5493.4800101336705 1.0484672863216842 0.9837150879553358 0.7754910669288804 0.9521637522453743 0.9345396417863661 0.9534385708783273 0.9529889126095618 0.8637567591190372 1.0409487372760597 0.9994174271585916 1.0 12.423504642053446 -8.781759424874748 24.975778214463965 1.019336911469783 0.931533998403124 0.22567884032290353 0.06602475111927655 227.91917579800824 280138.87179030484 0.011331150531444428 0.012069922145478862 1.6528771472099898e-09 8.781759424874748 -0.087802913066659 LNHVAAGLVS(ph)PSLK ddPTM_A549_MK2206_60min_R1 4 LNHVAAGLVSPSLK 14 0 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 LNHVAAGLVS(0.994)PS(0.006)LK;LNHVAAGLVS(0.976)PS(0.024)LK;LNHVAAGLVS(0.999)PS(0.001)LK;LNHVAAGLVS(0.977)PS(0.023)LK 124.29 2.9861999999999996e-07 97540700.0 4993.7 6195.7 6335.1 5275.8 6051.4 5820.700000000001 5842.200000000001 5882.799999999999 7960.4 8093.7 8059.599999999999 True False 5836.5144757567905 6511.03466602565 7233.51244018477 6568.37123683966 5161.247076241107 6436.642610532044 6903.65211733831 6716.704915319416 6157.382110146669 6265.3275486812245 6058.178886355965 0.9634107188385606 1.0747511402625618 1.19400773332657 1.0842154647550493 0.8519469584935996 1.0624715333230657 1.1395589742136027 1.108700327493888 1.0163750898828898 1.0341932231139284 1.0 12.564668463430618 -8.947035872730329 13.000322444370596 1.0072179199353692 1.0615502923137512 0.04512039281082436 0.08575175377982193 2.2967306112991603 561.0906315233678 0.015276746867978457 0.016234228353723013 1.1297025973683747e-09 8.947035872730329 0.054332372378381955 LNHVAAGLVS(ph)PSLK ddPTM_A549_PD325901_60min_R1 4 LNHVAAGLVSPSLK 14 0 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 LNHVAAGLVS(0.997)PS(0.003)LK;LNHVAAGLVS(0.998)PS(0.002)LK;LNHVAAGLVS(0.998)PS(0.002)LK;LNHVAAGLVS(0.977)PS(0.023)LK 134.14 6.1476000000000006e-09 173573000.0 10536.2 10110.4 11570.7 11307.199999999999 13712.0 12243.6 10842.8 11472.199999999999 12278.5 12116.599999999999 12661.7 True False 11605.827267659515 10962.438890451891 12355.95728227143 12005.620063485598 12748.916423831979 12143.892180952644 11255.428687407828 11243.377971233207 11762.477344633928 11351.555808168105 11104.391169129369 1.0451565593189978 0.9872165635634207 1.1127091160676565 1.0811596854460315 1.148096841119435 1.0936117069356426 1.0136016028234263 1.0125163820318421 1.059263598110094 1.0222582792045243 1.0 13.438842674608443 -10.509844227007973 0.37839466753637396 0.9843444310971503 1.069754979582168 0.17844498949654508 0.04442041595302868 2.8268607275019506 0.5735890174244405 0.09699722961815636 0.01674784805947809 3.0914040602484604e-11 10.509844227007973 0.08541054848501761 LNHVAAGLVS(ph)PSLKSDTSSK ddPTM_A549_PD325901_60min_R1 1 LNHVAAGLVSPSLKSDTSSK 20 1 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 LNHVAAGLVS(0.591)PS(0.132)LKS(0.153)DT(0.036)S(0.041)S(0.047)K 42.45399999999999 0.029461 2729600.0 2003.9 3012.1 3221.2 2753.8 3675.0 3780.5 3276.1 3723.2 4048.6 3311.2 2802.0 True False 2207.3344528067887 3265.9402379658704 3439.8100026491697 2923.895971666431 3416.8806780617347 3749.7128614207804 3400.773778250706 3648.937855206102 3878.4514213857474 3102.130266907071 2457.3717633414544 0.8982501084025345 1.3290379122469247 1.3997922715494329 1.189846817353599 1.3904614389381487 1.5259037795412944 1.3839069159102098 1.4848945160191775 1.5782924990201543 1.262377273631929 1.0 11.262900416907092 -5.26120432253007 21.901219392186675 1.3264937914938677 0.8982495696727236 0.4014772533855273 0.15678778704067795 3.84767071403799 357043.4228878191 0.030247967760832432 0.24292220115167829 5.480190777194954e-06 5.26120432253007 -0.4282442218211441 LNIEGKS(ph)K ddPTM_A549_PD325901_60min_R1 1 LNIEGKSK 8 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LNIEGKS(1)K 48.74100000000001 0.0097139 4499000.0 2704.0 2853.4 3890.6 3371.9 4734.7 3912.2 3671.3 4621.2 3585.1 3639.0 4280.0 True False 2978.5080894204075 3093.8660320081704 4154.639512078371 3580.17460485948 4402.151005828269 3880.340340285778 3811.013330512445 4529.0265407387315 3434.430714521081 3409.232918964373 3753.5871331554013 0.7935097771172733 0.8242424971782537 1.1068450963560903 0.9538008517867695 1.1727850852173136 1.0337685532888705 1.0152990180645598 1.2065862280733757 0.9149729559185626 0.9082599652078539 1.0 11.874054257764785 -5.667448540932136 7.320279122683167 1.0051972498659867 0.8030799450318619 0.43034170405780614 0.09552086097498311 0.17260163188388217 11.49427539465962 0.013411018985915176 0.05258052298676865 2.1505594816342037e-06 5.667448540932136 -0.20211730483412482 LNIHQKT(ph)HT(ph)GEK ddPTM_A549_MK2206_60min_R1 2 LNIHQKTHTGEK 12 1 Q9GZX5 Q9GZX5 ZNF350 Zinc finger protein 350 2 LNIHQKT(1)HT(1)GEK;LNIHQKT(1)HT(1)GEK 68.044 0.0021714000000000004 28294000.0 3779.2999999999997 4320.1 4229.2 4081.3999999999996 7034.1 6051.5 4406.2 6030.5 7901.0 5996.0 5346.299999999999 True False 4417.153444986208 4539.97463736098 4828.9641540037965 5081.343183221008 5999.393208015926 6691.865713339403 5206.749505223387 6885.341842631691 6111.436115304364 4641.499435597145 4018.6661596263957 1.0991590914824483 1.1297217676282543 1.2016335675050778 1.2644352582134881 1.4928817099287672 1.6651957260270476 1.2956412148720122 1.713340090750858 1.5207623307213274 1.1549850749554804 1.0 11.972501018849993 -6.160628092392966 2.299203880418497 1.3375529871264171 1.1189297532517433 0.203691792130977 0.20426001961721338 0.5831346059148546 5.924903897381851 0.03777240589963775 0.12608898244777134 6.908311431054602e-07 6.160628092392966 -0.21862323387467386 LNIHQKT(ph)HT(ph)GEK ddPTM_A549_PD325901_60min_R1 4 LNIHQKTHTGEK 12 1 Q9GZX5 Q9GZX5 ZNF350 Zinc finger protein 350 2 LNIHQKT(1)HT(1)GEK;LNIHQKT(1)HT(1)GEK;LNIHQKT(1)HT(1)GEK;LNIHQKT(1)HT(1)GEK 56.648 0.0078276 45155000.0 7658.7 7804.9 8758.3 7817.4 10152.2 7898.8 8110.8 8896.5 10200.5 8580.4 9704.699999999999 True False 8436.205585963055 8462.64631429893 9352.690905936359 8300.263043396448 9439.144495188666 7834.474791638793 8419.460932400065 8719.05232833076 9771.808458194279 8038.632079659778 8511.083423161965 0.9912023142676362 0.9943089373638122 1.0988837073884217 0.9752299009087618 1.1090414728518683 0.9205026436843685 0.9892349203730563 1.0244350683489754 1.1481274442218943 0.9444898704415865 1.0 13.055127076941611 -8.546312307553324 24.979142558303298 1.0708086647584139 1.01238742250737 0.0 0.07065105287040943 354.684184215525 378075.63350509654 0.011765797930638465 0.013341507351445535 2.842416348900532e-09 8.546312307553324 -0.05842124225104395 LNINS(ph)SPDEHEPLLR ddPTM_A549_MK2206_60min_R1 2 LNINSSPDEHEPLLR 15 0 Q13873 Q13873 BMPR2 Bone morphogenetic protein receptor type-2 1 LNINS(0.5)S(0.5)PDEHEPLLR;LNINS(0.576)S(0.424)PDEHEPLLR 84.566 5.0601000000000006e-05 9546100.0 1176.9 1216.87 1189.1 1144.79 1372.24 1197.84 1165.38 1132.56 2190.87 1717.13 1858.27 True False 1375.5319475575554 1278.8034853279914 1357.7322603626951 1425.2636013915765 1170.3853137953358 1324.5946337381595 1377.114461076944 1293.103848319534 1694.6414431004762 1329.2291404014222 1396.8102733570781 0.9847664881871304 0.9155169529606405 0.9720233923391304 1.0203702167554323 0.8378985579640998 0.9482996073293788 0.9858994362686083 0.9257548236753034 1.2132223505398438 0.9516175287047165 1.0 10.447920359614647 -8.737878654352139 24.99895546974971 1.100688344980552 0.9483865240727293 0.2137674486626815 0.07821617298136181 168.25504180952726 178525.85361759106 0.014378205695850537 0.016298851074252947 1.828611074576612e-09 8.737878654352139 -0.15230182090782274 LNINS(ph)SPDEHEPLLR ddPTM_A549_PD325901_60min_R1 1 LNINSSPDEHEPLLR 15 0 Q13873 Q13873 BMPR2 Bone morphogenetic protein receptor type-2 1 LNINS(0.5)S(0.5)PDEHEPLLR 70.235 0.00059843 7853200.0 594.29 627.19 571.28 893.13 523.7 644.24 456.22 654.1 592.74 644.11 679.54 True False 654.6218833068253 680.0455024234968 610.0504961857125 948.2966116546002 486.91711866692015 638.993523037091 473.58170175316314 641.0534623684771 567.8291991088743 603.4407846754999 595.9608879589765 1.0984309482938532 1.1410908268703506 1.0236418337367568 1.5912061190832325 0.8170286481961841 1.0722071463875607 0.794652319173272 1.0756636472637187 0.9527960820609443 1.0125509859248318 1.0 9.219073841604468 LNINSS(ph)PDEHEPLLR ddPTM_A549_PD325901_60min_R1 1 LNINSSPDEHEPLLR 15 0 Q13873 Q13873 BMPR2 Bone morphogenetic protein receptor type-2 1 LNINS(0.233)S(0.767)PDEHEPLLR 103.75 1.8334e-06 7596700.0 744.87 723.64 735.25 653.96 771.29 736.08 965.27 958.77 676.76 906.57 742.97 True False 820.488654055688 784.623682414801 785.1484864174228 694.3536239490808 717.1172512060507 730.0856085265458 1002.003878066012 939.6465802094855 648.3181306962949 849.3290154837964 651.5894000748751 1.259211174953743 1.204168886609633 1.2049743079417807 1.0656306316052586 1.1005661711557089 1.120468823530049 1.5377841903979257 1.4420838953204416 0.9949795540286501 1.3034727320398378 1.0 9.347819324356697 -8.807132553939395 24.90394375223774 0.9976290326671486 1.2346085983472643 0.041839257130911744 0.16250128498188565 95.23119285992787 51902.996062829625 0.025057470764900027 0.026675762155428225 1.5590765739542008e-09 8.807132553939395 0.2369795656801157 LNLES(ph)SNSK ddPTM_A549_MK2206_60min_R1 1 LNLESSNSK 9 0 G5EA36;P30260;P30260-2;I3L225;F6QPS0 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LNLES(0.73)S(0.264)NS(0.006)K 68.536 0.0044179 3655200.0 2392.8 2472.0 2496.7 2029.7 2966.8 2499.7 2280.4 1984.0 3177.3 3587.3 3498.1 True False 2796.646141656658 2597.81424123431 2850.769602596538 2526.976591116697 2530.387650096197 2764.21659483343 2694.7191620242866 2265.238075745175 2457.6466231055 2776.9264385119477 2629.425227351457 1.0635959952638157 0.9879779862958917 1.0841797564511977 0.9610376308977785 0.9623348950085879 1.051262673712819 1.0248320180371122 0.861495528445539 0.9346706639690285 1.0560963702736907 1.0 11.360531756318863 LNLES(ph)SNSK ddPTM_A549_PD325901_60min_R1 1 LNLESSNSK 9 0 G5EA36;P30260;P30260-2;I3L225;F6QPS0 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LNLES(0.533)S(0.466)NS(0.001)K 101.93 0.00071335 7725500.0 4062.1 4144.7 3753.8 4078.5 4779.8 4418.0 4323.7 4312.6 4585.0 5371.0 4733.0 True False 4474.4814016400305 4493.988414825918 4008.5554414331455 4330.419682054447 4444.083337414823 4382.021272783233 4488.240769519426 4226.581809830747 4392.308394766998 5031.874143379406 4150.871004958996 1.0779620461089783 1.0826615448798587 0.9657142890357643 1.0432556629394036 1.0706387483748663 1.0556871720533074 1.0812768607257075 1.018239739269493 1.0581654764794086 1.2122453666634991 1.0 12.019198383214638 -10.820729569660074 0.796486274362032 0.995941166720716 1.0501567425938727 0.0 0.07129695483755455 0.9199689191643298 0.9029790246279755 0.032661247583887255 0.006013988384568476 1.5110207570891527e-11 10.820729569660074 0.05421557587315673 LNLESS(ph)NSK ddPTM_A549_MK2206_60min_R1 1 LNLESSNSK 9 0 G5EA36;P30260;P30260-2;I3L225;F6QPS0 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LNLES(0.292)S(0.698)NS(0.01)K 89.805 0.0010798 3671200.0 2878.0 3117.6 2609.7 2706.4 4213.5 2621.1 2239.7 2582.2 4172.3 3612.7 4406.1 True False 3363.7360396555755 3276.272523653756 2979.7947017648025 3369.468121494911 3593.699731589701 2898.4630622546338 2646.6244988536178 2948.234757655841 3227.2807117940006 2796.588560870882 3311.9437678263203 1.0156380287408222 0.9892295139431139 0.8997117435120245 1.0173687591641523 1.0850726894884153 0.8751546721328967 0.7991151675231003 0.8901826130915299 0.9744370490662391 0.8443949405295387 1.0 11.693462462762971 -4.301293882295715 16.774079013521394 0.9677959059534664 0.9644079427044833 0.0 0.08684544937269705 0.0 0.0 0.010736767700860014 0.0 4.996962815700217e-05 4.301293882295715 -0.0033879632489831613 LNLESS(ph)NSK ddPTM_A549_PD325901_60min_R1 1 LNLESSNSK 9 0 G5EA36;P30260;P30260-2;I3L225;F6QPS0 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LNLES(0.064)S(0.935)NS(0.001)K 134.13 4.6448999999999995e-05 10105000.0 4097.9 4134.1 3754.9 3568.5 3966.2 3830.9 3931.0 3840.0 3673.2 4436.8 4848.4 True False 4513.9157912854635 4482.495115625215 4009.7300940479827 3788.918140348486 3687.627794647198 3799.7024205308476 4080.5963561257367 3763.4081875782745 3518.828177897082 4156.659690810976 4252.077536539867 1.0615788993722508 1.0541894114360038 0.9430049333744994 0.8910745647953829 0.8672531869322424 0.8936108026907854 0.9596712009739895 0.8850751556710211 0.8275550357815282 0.9775597117152908 1.0 12.05395218928314 -5.81553267309766 3.4428863987055975 0.9106866712281572 1.0623820567613944 0.5732526839378119 0.04771566191924345 0.1566875752301973 3.708430401474706 0.008840883376625372 0.03426273368065937 1.5292106956134088e-06 5.81553267309766 0.15169538553323725 LNLGTDSDS(ph)SPQK ddPTM_A549_MK2206_60min_R1 3 LNLGTDSDSSPQK 13 0 Q16512;Q16512-2;Q16512-3;K7EN76 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDS(0.063)DS(0.742)S(0.195)PQK;LNLGTDSDS(0.5)S(0.5)PQK;LNLGTDSDS(0.5)S(0.5)PQK 260.97 6.405099999999999e-70 66044000.0 11356.3 12904.5 12284.3 11199.8 15441.3 12398.0 12036.7 11955.0 16744.4 17021.0 17668.5 True False 13272.965805121818 13561.283930424006 14026.398457634732 13943.751502778126 13169.905224966418 13709.948130873661 14223.61258443156 13649.657860651998 12951.820135312291 13175.944278402103 13280.9238242072 0.9994007932587583 1.02110998526366 1.0561312332858013 1.0499082509126954 0.9916407472318735 1.0323037999724445 1.0709806616393744 1.0277641857844786 0.9752198195508771 0.9920954635991699 1.0 13.69706788393357 -8.70415012823533 7.327312364076621 0.9883202679122459 1.032479896604176 0.408435351719343 0.02251161766237573 0.15819846008847405 16.869093728544712 0.0039917672845878535 0.0045153571874181255 1.9762863533503115e-09 8.70415012823533 0.04415962869193002 LNLGTDSDS(ph)SPQK ddPTM_A549_PD325901_60min_R1 1 LNLGTDSDSSPQK 13 0 Q16512;Q16512-2;Q16512-3;K7EN76 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDSDS(0.5)S(0.5)PQK 226.88 3.4622e-46 90773000.0 8080.9 9414.7 9358.5 8755.4 10813.0 9909.5 9549.7 9411.0 9612.4 10041.0 9591.5 True False 8901.267019155839 10208.109809892523 9993.624087232163 9296.201173043883 10053.532182824916 9828.800317484256 9913.11905929635 9223.290222213318 9208.42425602143 9407.009546392224 8411.806305528044 1.058187349523982 1.213545514378284 1.1880473377833944 1.1051373314355366 1.1951692439967345 1.1684530005196383 1.1784768573168023 1.0964696388874273 1.0947023649331853 1.118310289694873 1.0 13.038199914894475 -9.472354694724704 0.5597425959794806 1.0052273984125761 1.1629126679640238 0.24268078674022175 0.054782156849383985 0.3301560733072056 0.23175406586011593 0.020976898932585992 0.011759987969155304 3.370119535854551e-10 9.472354694724704 0.15768526955144768 LNLGTDSDSS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 LNLGTDSDSSPQK 13 0 Q16512;Q16512-2;Q16512-3;K7EN76 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDS(0.002)DS(0.062)S(0.935)PQK 227.63 3.1319999999999996e-46 24451000.0 3261.5 3965.9 3626.2 3830.8 5287.0 4287.1 3634.9 4232.2 6778.9 5636.8 5587.7 True False 3811.9614639807683 4167.7473702715 4140.449686760748 4769.346171971148 4509.289303646551 4740.758076453338 4295.314279092298 4832.127310568919 5243.48997367887 4363.44296507238 4200.119877325332 0.9075839679148049 0.9922924802150058 0.98579321726346 1.1355262019350514 1.0736096671883806 1.1287197067985326 1.022664686853554 1.1504736654435812 1.2484143612153196 1.0388853395896531 1.0 12.036214789685552 -5.833537989116599 1.0578926103728061 1.1159385182246877 0.896163047084159 0.4255535059072173 0.06969232471301828 0.7451528661800282 1.1334450456570906 0.014166675457985898 0.14595898501410431 1.4671077487239996e-06 5.833537989116599 -0.21977547114052876 LNLGTDSDSS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 LNLGTDSDSSPQK 13 0 Q16512;Q16512-2;Q16512-3;K7EN76 Q16512 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDSDS(0.024)S(0.976)PQK 230.36 1.9152999999999998e-46 92062000.0 5914.1 6228.4 6052.8 6113.8 7886.2 6587.2 6407.0 6610.7 6535.5 6896.4 6744.0 True False 6514.495078269693 6753.2891265717 6463.5794064432175 6491.435540552773 7332.30051791305 6533.556027179199 6650.821891044929 6478.844402506178 6260.835662813457 6460.960127053016 5914.530753738322 1.1014390404770757 1.1418131729728913 1.0928304671267226 1.0975402463584814 1.2397095937456435 1.1046617727111516 1.124488512776982 1.0954113981757856 1.0585515442381037 1.092387612148152 1.0 12.530047997418357 -9.016780644186403 0.7960387993685335 1.0124361017549661 1.1326059548708358 0.3126572829803643 0.045771560428191874 0.25837992517328956 0.3463692877724188 0.010763523413174231 0.009556552501648625 9.620980974110995e-10 9.016780644186403 0.1201698531158697 LNLT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 LNLTSPK 7 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.5)S(0.5)PK 95.64200000000001 0.012578 49786000.0 6324.7 6966.3 7318.9 7116.9 10336.0 7198.4 7561.3 7954.4 10963.0 9222.3 9789.7 True False 7392.154735931064 7320.854914526931 8356.830073474503 8860.540819489781 8815.588092016404 7960.129910088802 8935.090334947477 9081.960559328343 8479.89800431359 7138.976024834482 7358.647308025092 1.004553476543091 0.9948642200235707 1.135647588974787 1.2040991297173294 1.1979902994402818 1.0817382022654833 1.2142300019193977 1.2341888636820335 1.152371848976333 0.9701478717493304 1.0 12.845224874129046 -4.121639139865211 15.650198218846787 1.1030498078653803 1.1146991828532105 0.0 0.09649326388574414 0.0 0.0 0.013429822130684445 0.0 7.557199029646266e-05 4.121639139865211 0.011649374987830141 LNLT(ph)SPK ddPTM_A549_PD325901_60min_R1 1 LNLTSPK 7 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.727)S(0.273)PK 109.44 0.0091956 223870000.0 7781.9 7222.2 8270.5 8195.4 8498.7 7310.4 9184.6 7859.6 8641.3 7055.6 8083.5 True False 8571.912759268 7830.840140313102 8831.785864556674 8701.611244896167 7901.780630923343 7250.866526155398 9534.124979005965 7702.8341122630745 8278.136211930216 6610.108211883771 7089.280745528427 1.2091371560753528 1.1046029098582975 1.2457943452341529 1.2274321693896406 1.1146096359503608 1.0227929724364337 1.3448649194799664 1.0865466312815508 1.1676976140564979 0.9324088647572752 1.0 12.791423548587177 -10.835284130696875 0.5023736236137774 0.9567226999993933 1.1745006114567969 0.44566599541979657 0.0860390583292436 1.406764276619714 0.44330326500732625 0.1520567279023113 0.019167521676193865 1.461220879671328e-11 10.835284130696875 0.21777791145740355 LNLTLS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 LNLTLSPAK 9 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 LNLT(0.058)LS(0.942)PAK 73.655 0.0022151999999999996 4304600.0 3614.0 4316.3 4195.0 4130.3 5979.6 4956.5 4388.4 4042.1 7507.5 6324.8 6379.1 True False 4223.954846183198 4535.981233592093 4789.91407974225 5142.223685416213 5100.008761128225 5480.993540141579 5185.715475630314 4615.080053412086 5807.0632370139865 4896.023287235626 4794.993415796487 0.880909415280514 0.9459827866809761 0.9989407000982515 1.0724151713067678 1.0636112125465917 1.1430659158123455 1.0814854215537906 0.9624789135702044 1.211068031477033 1.0210698665625504 1.0 12.227313118882703 -5.7741510645047684 1.0988311921865208 1.0918679790103791 0.8582041494460023 0.44664202985543955 0.06604245125224488 0.6301763012699464 1.0157831986546386 0.012393765329105116 0.13759148716026806 1.6820888633982617e-06 5.7741510645047684 -0.2336638295643768 LNLTLS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 LNLTLSPAK 9 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 LNLT(0.048)LS(0.952)PAK;LNLT(0.108)LS(0.892)PAK 117.94 0.00017209999999999998 19682900.0 11662.8 12332.7 12533.6 12426.400000000001 14832.1 14662.0 14423.3 14925.7 13539.8 14193.3 15083.0 True False 12846.798870300427 13372.019910614421 13384.205466659512 13193.950505597984 13790.344463967198 14542.597533170603 14972.1865742326 14627.995204514858 12970.769291922836 13297.132615756265 13227.886619014696 0.9711905794409768 1.0108961692635419 1.0118173712964935 0.9974345022455869 1.042520612789649 1.0993893395084025 1.1318653542668353 1.105845221222833 0.9805624787619315 1.0052348495822476 1.0 13.691294964384776 -3.7380110063017353 16.35043221544036 1.0170993092914473 0.3080508974507945 0.0 0.054600831998224915 0.0 0.0 0.008204879117373989 0.0 0.00018280538872841827 3.7380110063017353 -0.7090484118406528 LNLTLS(ph)PAKK ddPTM_A549_PD325901_60min_R1 2 LNLTLSPAKK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 LNLTLS(1)PAKK;LNLT(0.003)LS(0.997)PAKK 81.431 0.00046784 7270300.0 5033.299999999999 4828.799999999999 5274.3 4942.0 6395.5 5241.1 5213.8 5737.6 7390.0 6236.0 6183.700000000001 True False 5544.276910680376 5235.739922675074 5632.245714942419 5247.2561159036595 5946.30214327723 5198.418219281166 5412.2140121008315 5623.159066939872 7079.4239994172485 5842.257895757584 5423.144101703983 1.0223362696444545 0.9654436290988422 1.0385572666551004 0.9675671561548478 1.0964676637319792 0.9585616981204303 0.9979845474510409 1.036881735296881 1.3054095311966452 1.0772824373082606 1.0 12.40491379026353 -8.545461585566134 24.98687209929571 1.1456382612413276 1.007222056572755 0.30939106380462245 0.07766835316711972 241.2795599795029 266963.4817551483 0.018683523259242222 0.021185751210117468 2.8479897008498802e-09 8.545461585566134 -0.13841620466857263 LNLTS(ph)PK ddPTM_A549_MK2206_60min_R1 3 LNLTSPK 7 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.48)S(0.52)PK;LNLT(0.137)S(0.863)PK;LNLT(0.381)S(0.619)PK 101.54 0.010915000000000001 179118000.0 15871.399999999998 17188.9 16357.7 15947.099999999999 22271.7 18173.7 17323.9 17689.3 23843.2 21765.1 24022.5 True False 18550.10430152518 18063.741590272028 18677.467828891484 19854.140215892523 18995.562433142597 20096.82887127428 20471.42838580624 20196.812446209235 18442.753269766486 16848.348793481568 18057.05026272846 1.027305347862626 1.0003705659255644 1.0343587439330348 1.0995228969857516 1.0519748329189358 1.1129630021995411 1.1337083348580637 1.1185000956605553 1.0213602444156762 0.9330620753854925 1.0 14.140274617943948 -8.92671818622233 8.135122213865447 1.0093584985874542 1.072317822391152 0.39278950699814497 0.04598742252832199 0.23709117631182505 23.222753297271066 0.007722435545496448 0.008190788924087275 1.1838094807577914e-09 8.92671818622233 0.06295932380369784 LNLTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 LNLTSPK 7 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.243)S(0.757)PK 115.82 0.0072079 225460000.0 9507.0 8862.1 9756.2 10341.0 10462.0 8930.6 10282.0 9408.9 9406.8 9208.3 10220.0 True False 10472.1436413165 9608.940268542656 10418.314400796538 10979.740083885012 9727.185211940643 8857.872154530995 10673.287136526293 9221.232108360737 9011.464909028176 8626.886366501692 8963.004789917795 1.1683742100747605 1.0720668451891773 1.162368496390382 1.2250066067392689 1.08525940127606 0.988270380541907 1.190815734979004 1.0288103514943352 1.005406682272991 0.9624993591664491 1.0 13.129766752301258 -8.037131196408657 0.6583551038093605 0.9972736533172057 1.145518913308904 0.4828477540210373 0.06313729606411585 0.4312130700926881 0.3839339178505714 0.014575432530385785 0.023358256436664945 9.180552184665558e-09 8.037131196408657 0.14824525999169835 LNLTS(ph)PKR ddPTM_A549_MK2206_60min_R1 3 LNLTSPKR 8 1 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.021)S(0.979)PKR;LNLT(0.022)S(0.978)PKR;LNLT(0.436)S(0.564)PKR 52.6 0.021531 205952400.0 15845.8 18525.1 18421.3 16425.4 24221.9 17568.1 18142.9 15915.300000000001 24891.5 24666.0 24923.699999999997 True False 18520.183647385085 19467.94846290036 21033.717339012142 20449.623737364225 20658.890596556914 19427.144681239035 21439.230084498522 18171.342513562104 19253.61499355759 19093.933468719017 18734.45743087377 0.9885625839830532 1.0391519762305912 1.1227289296539364 1.091551426713 1.1027215852278562 1.036973969111256 1.144374218661245 0.9699422884602108 1.0277113743271937 1.0191879609629284 1.0 14.193406575891553 -8.277464015194582 24.999514348371026 1.0102157910803449 1.0758200787196475 0.3824023086113171 0.04311889977765662 684.3584642173158 1067644.040340604 0.0069040181541029245 0.0083595629769182 5.278809441692247e-09 8.277464015194582 0.0656042876393026 LNLTS(ph)PKR ddPTM_A549_PD325901_60min_R1 3 LNLTSPKR 8 1 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.038)S(0.962)PKR;LNLT(0.251)S(0.749)PKR;LNLT(0.267)S(0.733)PKR 54.191 0.015252000000000002 128160000.0 11056.0 11397.0 12853.0 12456.0 13533.0 12551.0 13289.0 13492.0 14314.0 13216.0 14803.0 True False 12178.396981002976 12357.465187774982 13725.281871367748 13225.378830371512 12582.4887663155 12448.78881727079 13794.720167019825 13222.89147573075 13712.432358275857 12381.539504543336 12982.324843948452 0.938075200504614 0.9518684316033934 1.05722834980251 1.0187219153229212 0.9692015041651549 0.9589028904228688 1.0625770293715968 1.0185303198521054 1.0562385800003868 0.9537228234059199 1.0 13.664261140428913 -7.7557138788110835 24.99995942749198 1.0289578820208238 0.9854097784567002 0.1310320488049298 0.041648539748390334 163.91361237233298 715711.7189122783 0.005963319731133293 0.008711200817265737 1.755036371272603e-08 7.7557138788110835 -0.04354810356412364 LNLVQR ddPTM_A549_MK2206_60min_R1 1 LNLVQR 6 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;Q9BYZ2;P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 A0A5F9ZHM4;P00338 LDHB;LDHAL6B;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6B;L-lactate dehydrogenase A chain 0 116.0 0.054162 9989500.0 2739.5 2686.5 2880.3 2618.1 3601.8 2777.1 2696.5 2605.7 3510.9 3878.0 4133.6 False True 3201.860625655472 2823.2313750307344 3288.769850746508 3259.5346175309733 3071.9799912756093 3070.970878710213 3186.419145938645 2975.065954621575 2715.6867557552305 3001.9571066120293 3107.1130384437215 1.0304937689873064 0.9086349096732005 1.0584648225073183 1.0490556916344427 0.988692703891549 0.9883679289146136 1.0255240496607894 0.9575016801164449 0.8740225161281718 0.9661563868032422 1.0 11.601359013098243 -8.412678247284418 5.473676107456861 0.9393636231446153 1.0051480226696023 0.2538688045280022 0.0471019067379926 0.2654623221106447 11.27980230283735 0.009430262182044038 0.011398831667601184 3.86653328114669e-09 8.412678247284418 0.06578439952498705 LNLVQR ddPTM_A549_PD325901_60min_R1 1 LNLVQR 6 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;Q9BYZ2;P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 A0A5F9ZHM4;P00338 LDHB;LDHAL6B;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6B;L-lactate dehydrogenase A chain 0 124.94 0.040833 45514000.0 4946.7 5057.8 4747.9 4522.5 4543.7 4980.9 5380.1 4924.2 4734.8 5313.5 5645.4 False True 5448.885342431929 5484.0385563506425 5070.12104544207 4801.844553657286 4224.566186914043 4940.337201812134 5584.842649603684 4825.982968039828 4535.81282171053 4978.004703192414 4951.051589139136 1.100551114107731 1.1076512651131918 1.0240493265237087 0.969863566800807 0.8532664446844492 0.9978359370460801 1.1280114030431156 0.9747389784074024 0.916131197594569 1.0054439170281326 1.0 12.273519266684325 -5.942554938591363 2.7961362367405633 0.9683627799946516 1.1058426345112415 0.3419621328441226 0.06390323622820035 0.21293576561675898 3.322581457394679 0.009578963900391337 0.03597106500223928 1.1414189051021946e-06 5.942554938591363 0.13747985451658995 LNNGGSDSPCDLKS(ph)PNAFSENR ddPTM_A549_MK2206_60min_R1 2 LNNGGSDSPCDLKSPNAFSENR 22 1 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 LNNGGS(0.003)DS(0.079)PCDLKS(0.885)PNAFS(0.033)ENR;LNNGGS(0.002)DS(0.178)PCDLKS(0.818)PNAFS(0.002)ENR 48.18 0.0036452 6612200.0 2668.5 2989.6 3108.5 3155.1 3983.1 3520.9 2440.9 3302.0 4029.6 4258.3 4214.1 True False 3118.8775614388114 3141.7578703859576 3549.3320421641897 3928.0996416378234 3397.1912663806656 3893.479301015734 2884.379934478634 3770.068611950892 3116.9020339489252 3296.3470724822077 3167.6226667567457 0.9846114545682794 0.9918346346481759 1.1205034234075195 1.2400781453113265 1.0724734678890808 1.2291487057081125 0.910581921498839 1.1901886709918565 0.9839877920624454 1.0406375440725268 1.0 11.62918477373456 -8.810317735495492 24.999951449982888 0.9924385961284875 1.0927628818383883 0.11951990933104317 0.09931619306835669 135.79719157343195 69455.97243289727 0.016340459330868397 0.017395453983110667 1.547683898922433e-09 8.810317735495492 0.10032428570990082 LNNS(ph)SPNSSGGVK ddPTM_A549_PD325901_60min_R1 1 LNNSSPNSSGGVK 13 0 O00472;H0Y8G1;O00472-2 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 LNNS(0.5)S(0.5)PNS(0.001)SGGVK 102.73 0.00012992 6022600.0 3904.5 4033.0 3980.1 3719.0 5306.3 4593.6 3900.9 4364.0 4142.4 4800.0 4549.1 True False 4300.881965659019 4372.875063814731 4250.2135202855925 3948.714183538186 4933.603793741218 4556.191244603227 4049.3508841543858 4276.9565965082265 3968.3093335840335 4496.927180826877 3989.589539120846 1.0780261787549128 1.096071418108427 1.0653260137688696 0.9897544959996893 1.2366193928883213 1.1420200499140165 1.0149793216689427 1.0720292287137652 0.99466606643913 1.1271653729616076 1.0 11.962024609972893 -8.393442553122089 1.4951056905500382 0.9973637622212965 1.0962869898580965 0.0 0.07206911892630011 0.3253089956606492 1.410380055341622 0.011141399011359856 0.013749809020367262 4.041638322841318e-09 8.393442553122089 0.09892322763679995 LNPEDIKK ddPTM_A549_PD325901_60min_R1 1 LNPEDIKK 8 1 P53396;P53396-2 P53396 ACLY ATP-citrate synthase 0 64.09100000000001 0.0096823 4389700.0 2569.8 2875.6 2985.3 2573.3 3307.0 2898.0 2795.2 2559.4 3307.2 3417.4 2774.8 False True 2830.6842042132284 3117.936903919078 3187.9004100672296 2732.246896611673 3074.727728530657 2874.3996488288385 2901.572865592129 2508.3507591895404 3168.2098850978005 3201.6247807828663 2433.517190906449 1.1632069889585785 1.28124712476664 1.3099970782946408 1.1227563572682024 1.263491270996679 1.1811708828562528 1.1923371145413344 1.0307511977160997 1.3019056930999897 1.3156368045176245 1.0 11.248827250833004 -10.973800411150286 1.1549247792280204 0.9960947781463083 1.2131310298929132 0.0 0.1220170090757626 0.3499880600507946 0.8048928429480325 0.06252647992140184 0.013366355073181188 1.0621835930899695e-11 10.973800411150286 0.2170362517466049 LNPHRES(ph)DGGAGDLEDPW ddPTM_A549_MK2206_60min_R1 2 LNPHRESDGGAGDLEDPW 18 1 O75688-2 O75688-2 1 LNPHRES(1)DGGAGDLEDPW;LNPHRES(1)DGGAGDLEDPW 80.303 7.8878e-05 6231900.0 1013.09 1027.29 834.49 929.0 1343.78 1019.93 955.3599999999999 1120.31 1388.96 1417.4 2027.6 True False 1184.0748243275416 1079.5746730896412 952.8332301320886 1156.605041704395 1146.1117420946025 1127.8583156252594 1128.9365456198566 1279.1173733054823 1074.3627777133463 1097.208355572947 1524.0909610868234 0.7769056142706747 0.708340053614517 0.6251813405235518 0.758881898282255 0.751996942018024 0.7400203428940934 0.7407278006653988 0.8392657695399942 0.7049203788645412 0.7199100208497609 1.0 10.57373329326286 -11.147594672886411 0.5150321773785524 1.0999065706614692 0.7278960863430914 0.0 0.09785595911490227 0.7027278037769443 0.19396667408050858 0.13838661743410893 0.011522146994718105 7.1187759919356714e-12 11.147594672886411 -0.3720104843183778 LNPHRES(ph)DGGAGDLEDPW ddPTM_A549_PD325901_60min_R1 2 LNPHRESDGGAGDLEDPW 18 1 O75688-2 O75688-2 1 LNPHRES(1)DGGAGDLEDPW;LNPHRES(1)DGGAGDLEDPW 122.01 6.6607e-11 10792600.0 2271.82 1961.79 1495.1599999999999 1731.7199999999998 2015.93 2562.3999999999996 1608.19 1929.3899999999999 2129.18 2318.5 3024.8 True False 2502.453493974509 2127.1169282026044 1596.630548727472 1838.684411378527 1874.3380313809519 2541.532663961013 1669.3905504853342 1890.9068028728263 2039.6979690228989 2172.1095143223138 2652.7687757870203 0.9433364554104735 0.8018478457744715 0.6018732440236091 0.6931189887942752 0.7065591424661108 0.9580679202645523 0.6293011911639609 0.7128049832808494 0.7688939901736305 0.8188084593531507 1.0 11.373283215576146 -10.439252850715787 0.7212974041225184 1.0060229689973295 0.750454525680326 0.13331428758494102 0.11926028614924349 0.558604868423584 0.5115728680429835 0.07987941291663918 0.021711435658000343 3.637032227148366e-11 10.439252850715787 -0.25556844331700346 LNPNFLQLSTGS(ph)VDKNK ddPTM_A549_PD325901_60min_R1 3 LNPNFLQLSTGSVDKNK 17 1 O95628-5;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6;O95628-3 O95628-5 CNOT4 CCR4-NOT transcription complex subunit 4 1 LNPNFLQLS(0.125)T(0.29)GS(0.586)VDKNK;LNPNFLQLS(0.037)T(0.201)GS(0.762)VDKNK;LNPNFLQLS(0.098)T(0.08)GS(0.822)VDKNK 109.85 1.7896e-09 6955100.0 7418.700000000001 8032.6 7210.200000000001 7841.8 9456.0 8647.2 8435.4 8946.5 8574.0 8669.9 8528.5 True False 8171.840962641714 8709.535392412154 7699.527530454811 8326.170175980029 8791.843181429047 8576.780070170018 8756.413763027991 8768.055039106524 8213.66459688816 8122.4810343856125 7479.548566615847 1.0925580454301531 1.1644466661111366 1.029410727382775 1.1131915384763975 1.175451045357267 1.1466975571830023 1.1707142062171094 1.172270620481266 1.098149777855439 1.0859587262578152 1.0 12.868735482534563 -9.949592631887754 0.8495601144704266 1.0096174368400361 1.1316294064103405 0.2837164651679366 0.04818038941925312 0.30186209183464646 0.4443129271463174 0.01824680818785466 0.009028440894348034 1.1230714010780132e-10 9.949592631887754 0.12201196957030436 LNPYPTPS(ph)PPHPLYPGR ddPTM_A549_MK2206_60min_R1 1 LNPYPTPSPPHPLYPGR 17 0 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 LNPYPT(0.002)PS(0.998)PPHPLYPGR 71.735 0.00029117 3894400.0 1250.2 1212.0 1398.2 1055.9 1633.9 1597.7 1168.4 1110.0 1883.3 1928.2 1938.7 True False 1461.2031955446143 1273.6856231294437 1596.4857845758324 1314.5955474011516 1393.555474414242 1766.7675535325727 1380.6831559854297 1267.3458992324322 1456.735557012113 1492.6182808069395 1457.2672846020048 1.0027008847204613 0.8740233425862578 1.0955339500480517 0.9020963836158455 0.9562799420113497 1.2123840095779654 0.9474467522699578 0.8696729231649208 0.9996351200665038 1.0242584161316635 1.0 10.509049798169057 -5.738528303337629 24.996454419135045 0.9971925960280544 0.9383622347308069 0.06219037658120563 0.09266597509647072 549.2256796608663 599206.9248682905 0.011770899543976475 0.04552488107045117 1.825877751204592e-06 5.738528303337629 -0.0588303612972475 LNPYPTPS(ph)PPHPLYPGR ddPTM_A549_PD325901_60min_R1 2 LNPYPTPSPPHPLYPGR 17 0 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 LNPYPT(0.03)PS(0.97)PPHPLYPGR;LNPY(0.003)PT(0.042)PS(0.955)PPHPLYPGR 64.203 0.00084193 12120400.0 4860.5 4593.37 4971.3 5854.5 6164.1 5712.9 5133.3 5081.1 5968.2 5471.7 6147.7 True False 5353.934381889013 4980.469410333417 5308.6823128554 6216.1191684658 5731.154880990571 5666.37603650596 5328.65054054954 4979.753474454163 5717.377308974566 5126.215928193838 5391.571873481176 0.9930191987651531 0.9237509073801287 0.9846260863119576 1.1529326352932838 1.0629840453726782 1.050969210737304 0.9883296867021064 0.9236181194110439 1.060428654785423 0.9507831943050765 1.0 12.396490226187808 -6.00921326263965 24.80914537370541 1.0308220106949753 0.9573358931474786 0.14899353555521844 0.06051565845829165 453.11552941934207 1220147.0374156097 0.007958148604569054 0.02296577159560529 9.790091196621703e-07 6.00921326263965 -0.07348611754749668 LNQANS(ph)SGRESKVPGAR ddPTM_A549_PD325901_60min_R1 1 LNQANSSGRESKVPGAR 17 2 Q9BYV8;Q9BYV8-5;Q9BYV8-2 Q9BYV8 CEP41 Centrosomal protein of 41 kDa 1 LNQANS(0.333)S(0.333)GRES(0.333)KVPGAR 42.309 0.016097999999999998 5149200.0 1754.5 1751.4 1658.4 1798.7 2317.3 2255.4 1982.8 1914.9 2019.0 1913.2 2332.6 True False 1932.6155484053663 1898.9966245388337 1770.9489967693355 1909.8016138559115 2154.540842251008 2237.032770175487 2058.2565390297914 1876.705817290011 1934.1484512616275 1792.4002254912448 2045.7049875696937 0.9447185983064557 0.9282846921123509 0.8656912934808018 0.9335664846399793 1.05320212608496 1.0935265758104697 1.0061355628188642 0.9173882982607114 0.9454679257342009 0.8761772769692584 1.0 10.998382392766986 -6.538358725897398 24.773427779388882 0.9857962911021252 0.9119688415601028 0.23062440006960327 0.059212649104535005 212.91256888007004 340734.352357874 0.007917761533467883 0.01648667118329486 2.8949513789830897e-07 6.538358725897398 -0.07382744954202236 LNQPGT(ph)PTR ddPTM_A549_MK2206_60min_R1 2 LNQPGTPTR 9 0 P36507;G5E9C7;M0R1B6 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 LNQPGT(1)PTR;LNQPGT(0.961)PT(0.039)R 172.0 1.6331e-07 2672900000.0 12205.0 12784.6 10833.7 11752.5 13847.2 11430.4 11178.099999999999 10849.7 15688.3 15062.9 14861.8 True False 14264.905616398994 13435.28153255831 12370.081565126004 14631.863027589765 11810.295223274929 12639.957341114561 13209.016078329963 12387.678200812712 12134.92509906713 11660.180428361617 11171.204895186493 1.2769352769230409 1.2026707645786154 1.10731847470241 1.3097837847280394 1.0572087195682724 1.1314766365587774 1.1824164181270664 1.1088936526578597 1.0862682416912692 1.0437710647833356 1.0 13.447497178849913 -2.0000009299592807 0.0525030162758031 0.7033721031591087 1.9950443702596907 0.5378889794896461 0.06281186624794922 163.2851943544303 0.62783033291679 3.456262047888495 16.690016112836663 0.009999978586919157 2.0000009299592807 1.291672267100582 LNQS(ph)PSLAPVK ddPTM_A549_PD325901_60min_R1 1 LNQSPSLAPVK 11 0 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 LNQS(0.984)PS(0.016)LAPVK 113.24 3.2095e-05 4975500.0 3976.1 4345.6 4293.7 4361.0 5533.1 4727.5 3913.4 5056.2 5471.5 5026.5 5344.7 True False 4379.750744949883 4711.818962884525 4585.096302115591 4630.369065450396 5144.474144158748 4689.000807397628 4062.326578494649 4955.350124487832 5241.551882653788 4709.125932172142 4687.3357828447815 0.9343795597019885 1.005223261394959 0.9781881466432643 0.9878466745218301 1.097526267050688 1.0003552176822792 0.8666600317737831 1.0571783960142045 1.118236910152114 1.0046487280486947 1.0 12.194552432347198 -8.436010009663574 24.99996874755282 1.0575188211697657 0.9858397569966184 0.19322843995037509 0.060125018417949226 91.62195774464081 26365.98515422859 0.010869448616902559 0.013140522301537972 3.664291290545155e-09 8.436010009663574 -0.07167906417314729 LNQS(ph)PSLAPVKR ddPTM_A549_MK2206_60min_R1 2 LNQSPSLAPVKR 12 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 LNQS(0.753)PS(0.247)LAPVKR;LNQS(0.859)PS(0.141)LAPVKR 83.499 0.00023421 44540000.0 2388.7 2885.3 2997.6 2509.5 3566.3999999999996 2856.4 2939.7 2772.2 3877.7 4159.799999999999 4161.799999999999 True False 2791.854161892032 3032.1494458872794 3422.70475457339 3124.327612655737 3041.7872843815117 3158.662352075133 3473.8054379068544 3165.1678395064373 2999.407141414468 3220.098290893428 3128.3102001633174 0.8924479937271821 0.9692611192230816 1.0941065737006206 0.998726920524898 0.9723419641129935 1.0097024111963804 1.1104414893783552 1.0117819643784671 0.9587946685267592 1.0293411090515636 1.0 11.611167860622102 -3.760503895275338 15.560495872116602 0.9941337909922628 0.49766274050787285 0.0 0.058816610902755535 0.0 0.0 0.007612311021717832 0.0 0.00017357856941875038 3.760503895275338 -0.49647105048439 LNQS(ph)PSLAPVKR ddPTM_A549_PD325901_60min_R1 2 LNQSPSLAPVKR 12 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 LNQS(0.807)PS(0.193)LAPVKR;LNQS(0.893)PS(0.107)LAPVKR 97.79700000000001 0.00010575 87976000.0 3997.9 4539.5 4400.8 4896.3 5520.0 4727.8 4801.3 4944.799999999999 5169.6 4982.8 6140.3 True False 4403.763864901573 4922.0595963766345 4699.464752160206 5198.733330695888 5132.2942429662 4689.298364297096 4984.01609887217 4846.172084879442 4952.33968976826 4668.185157630033 5385.082026568714 0.8177709908919584 0.9140175715230265 0.8726821112425335 0.9653953839600908 0.9530577654425095 0.8707942313898307 0.9255227820638979 0.8999253977877368 0.9196405301413411 0.8668735470691659 1.0 12.394752604997516 -14.999999999999769 0.14640169627370975 1.3435549192098204 0.8742225032095325 0.0 0.05446494237657122 38.960966030914435 0.3782873012301803 3.856914143906057 0.07561339118426942 1.0000000000005318e-15 14.999999999999769 -0.46933241600028786 LNQSDSIEDPNS(ph)PAGRR ddPTM_A549_MK2206_60min_R1 2 LNQSDSIEDPNSPAGRR 17 1 Q86VS8 Q86VS8 HOOK3 Protein Hook homolog 3 1 LNQSDS(0.004)IEDPNS(0.995)PAGRR;LNQSDSIEDPNS(1)PAGRR 76.492 0.00018161 22916100.0 4666.8 4839.2 4199.799999999999 4518.700000000001 5948.4 4885.4 4238.6 4150.700000000001 6653.4 6597.4 6830.1 True False 5454.4417476944545 5085.49461010561 4795.394791919307 5625.781702852151 5073.39823979783 5402.36978533394 5008.698754672923 4739.074435985633 5146.415523296549 5107.042757906705 5133.997668829704 1.0624160935658928 0.9905525748446338 0.934046935983985 1.0957896878310327 0.9881964439914349 1.0522735174060591 0.975594279109725 0.9230768577785322 1.0024187495335726 0.9947497227965936 1.0 12.325866925497781 -7.79424870976874 24.999616236976355 0.9923324527397266 1.0172005867298577 0.13890071381323343 0.04588480023353392 438.827070591587 334370.02921718865 0.0069981033462750124 0.00966976772749853 1.6060212607320364e-08 7.79424870976874 0.024868133990131103 LNQSDSIEDPNS(ph)PAGRR ddPTM_A549_PD325901_60min_R1 2 LNQSDSIEDPNSPAGRR 17 1 Q86VS8 Q86VS8 HOOK3 Protein Hook homolog 3 1 LNQSDSIEDPNS(1)PAGRR;LNQSDSIEDPNS(1)PAGRR 114.75 6.8678e-10 34287000.0 7032.7 7996.7 7127.1 7132.0 8919.2 8028.700000000001 7339.1 6821.6 7576.200000000001 9030.0 9245.8 True False 7746.65452679989 8670.60997342109 7610.787864733919 7572.5274420527885 8292.746161569587 7963.316929106998 7618.393466609618 6685.537836558322 7257.798660945195 8459.844258930563 8108.625213955189 0.9553597955751689 1.069307033515214 0.9386039758793542 0.9338854913432477 1.0227068020479624 0.9820797877551288 0.9395419402907084 0.8244970830631448 0.8950714170947627 1.0433142531203583 1.0 12.985241616473528 -7.759494537288823 6.590008092294283 0.936941881953487 0.9851446688420741 0.10264857392672389 0.06315093322295488 0.2548829504731312 49.851523777998295 0.009920250110881363 0.014273602734459006 1.7398245820359268e-08 7.759494537288823 0.048202786888587035 LNQSS(ph)PDNVTDTK ddPTM_A549_MK2206_60min_R1 1 LNQSSPDNVTDTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 LNQS(0.07)S(0.93)PDNVTDTK 270.21 4.875999999999998e-159 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LNRS(ph)NSELEDEILCLEK ddPTM_A549_MK2206_60min_R1 1 LNRSNSELEDEILCLEK 17 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8;Q86UF2;A0A5F9ZHA4;G3V5K6;P0CG41;A4D2H0;A0A2R8YE69;Q8IX94 Q96PC5 MIA2;CTAGE6;CTAGE5;CTAGE8;CTAGE15;CTAGE4 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 8;cTAGE family member 15;cTAGE family member 4 1 LNRS(0.973)NS(0.027)ELEDEILCLEK 148.89 4.103600000000001e-17 13005000.0 723.63 1270.1 1256.1 714.77 1161.5 1136.2 956.63 966.1 1280.7 1203.9 1339.8 True False 845.7610529450882 1334.742664964279 1434.2338678341446 889.8886820872448 990.6448886297462 1256.4319298514802 1130.4372881807112 1103.0476335571645 990.6234948576507 931.9381538551371 1007.0906834011271 0.8398062526889837 1.3253450627272332 1.424135771954992 0.8836231898024615 0.9836699961160991 1.247585694674766 1.1224781509873771 1.095281340337668 0.98364875297241 0.9253766013481662 1.0 9.975977881217013 -8.662068079108538 3.7296782188647977 0.9920691646754904 1.1276205080928237 0.12548889777740646 0.16767831647251347 0.374244881606116 10.000022484191687 0.028356500181455687 0.031944779450773814 2.177368425809406e-09 8.662068079108538 0.13555134341733321 LNRSDS(ph)DSSTLSK ddPTM_A549_MK2206_60min_R1 1 LNRSDSDSSTLSK 13 1 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 LNRS(0.018)DS(0.914)DS(0.038)S(0.011)T(0.018)LS(0.001)K 91.969 0.00014965 7458800.0 2343.7 2182.6 2141.4 1733.2 3127.2 1991.5 1904.9 1789.1 2872.6 3133.0 4288.5 True False 2739.259262036404 2293.6850173616535 2445.082719990476 2157.834077806304 2667.193022576791 2202.2392081492885 2250.995672575014 2042.7104038889588 2221.9606865995825 2425.2531240370004 3223.5470934212094 0.849765547904305 0.7115407192414626 0.7585069022197735 0.6693974107622406 0.8274093553713373 0.683172649359998 0.6982977469660575 0.6336840581785926 0.689290592693459 0.7523554189689331 1.0 11.654433344913 -10.68150052105186 0.9187868724413443 1.0019891280941509 0.7216728725299848 0.11184838578584322 0.09458530904704132 0.2367651185707275 0.35185306401838934 0.04412651530902714 0.011338201604398251 2.0820899071974308e-11 10.68150052105186 -0.28031625556416606 LNRSDS(ph)DSSTLSK ddPTM_A549_PD325901_60min_R1 3 LNRSDSDSSTLSK 13 1 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 LNRSDS(0.999)DSSTLSK;LNRS(0.075)DS(0.779)DS(0.127)S(0.015)T(0.004)LS(0.001)K;LNRS(0.055)DS(0.937)DS(0.007)S(0.002)TLSK 148.7 9.369e-13 68141000.0 13180.3 11759.3 13500.8 15128.099999999999 15216.6 19140.100000000002 17108.6 18940.1 17606.7 16472.2 18427.7 True False 14518.354353175964 12750.297480266945 14417.045474905599 16062.528378592095 14147.838510420197 18984.229371479923 17759.67713518514 18562.324847278982 16866.751627948535 15432.14248083677 16161.209722814898 0.8983457675622077 0.7889444972839661 0.8920771230728446 0.9938939382685261 0.8754195232333128 1.1746787336519584 1.0989076585098498 1.1485727346928993 1.043656503271387 0.9548878299036675 1.0 13.980247572427823 -6.559012557392412 1.3266143461963866 1.044437054018157 0.8465336896312967 0.5219879936742906 0.07988192781562246 0.27914133797624796 0.950245847909495 0.012013757547531716 0.03891681847418032 2.760498036743689e-07 6.559012557392412 -0.19790336438686018 LNRSDSDS(ph)STLAK ddPTM_A549_PD325901_60min_R1 1 LNRSDSDSSTLAK 13 1 Q6AWC2-7;Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6 Q6AWC2-7 WWC2 Protein WWC2 1 LNRS(0.001)DS(0.32)DS(0.555)S(0.104)T(0.02)LAK 91.62 9.308799999999999e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LNRSNS(ph)ELEDEILCLEK ddPTM_A549_MK2206_60min_R1 1 LNRSNSELEDEILCLEK 17 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8;Q86UF2;A0A5F9ZHA4;G3V5K6;P0CG41;A4D2H0;A0A2R8YE69;Q8IX94 Q96PC5 MIA2;CTAGE6;CTAGE5;CTAGE8;CTAGE15;CTAGE4 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 8;cTAGE family member 15;cTAGE family member 4 1 LNRS(0.411)NS(0.589)ELEDEILCLEK 131.65 1.1483e-12 12687000.0 949.63 812.45 895.29 877.57 1329.1 847.17 820.0 1227.8 1291.9 1195.8 1257.8 True False 1109.9043277755818 853.8002347454758 1022.2555843748365 1092.5746893956136 1133.5911506481239 936.8169670940667 968.9833857480763 1401.844409979801 999.286712740376 925.6679494808315 945.4535464859962 1.1739385101476494 0.9030588947694238 1.0812330105210282 1.155609065571152 1.1989919069650603 0.9908651467604841 1.024887356284753 1.4827216156627583 1.056938986007788 0.9790729041329396 1.0 9.884862764924186 -8.987373634063843 24.9953463521358 1.025119975143957 1.122756906499747 0.11684457449573282 0.1410357367337491 119.48315641809876 236536.204791906 0.024983472564388216 0.025103447053868702 1.0295000355152548e-09 8.987373634063843 0.09763693135578988 LNRSNS(ph)ELEDEILCLEK ddPTM_A549_PD325901_60min_R1 2 LNRSNSELEDEILCLEK 17 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8;Q86UF2;A0A5F9ZHA4;G3V5K6;P0CG41;A4D2H0;A0A2R8YE69;Q8IX94 Q96PC5 MIA2;CTAGE6;CTAGE5;CTAGE8;CTAGE15;CTAGE4 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 8;cTAGE family member 15;cTAGE family member 4 1 LNRS(0.394)NS(0.606)ELEDEILCLEK;LNRS(0.4)NS(0.6)ELEDEILCLEK 137.09 4.4795e-13 40718000.0 2897.7 3294.6000000000004 3091.7 2851.2 2800.9 2859.3 3068.8999999999996 3337.2 2722.3 3026.7 3454.2 True False 3191.872370826006 3572.2475043997047 3301.521353902407 3027.3121484549793 2604.174446580441 2836.0148087978946 3185.688668866517 3270.6369280172466 2607.8911980532594 2835.5936454601456 3029.355297977891 1.0536474123575388 1.179210476494519 1.0898428969709126 0.9993255497219902 0.8596464232236937 0.9361776780329953 1.0516061523034224 1.0796478479102178 0.8608733349284051 0.9360386506504924 1.0 11.564795079226604 -6.310999790827976 3.2449190493745177 0.9485834661219255 1.1185000609517106 0.44369448631166675 0.07079440690292013 0.17437055977287136 3.6790594757976707 0.011467386597362655 0.030246925895514754 4.886525946956456e-07 6.310999790827976 0.16991659482978516 LNS(ph)CETK ddPTM_A549_MK2206_60min_R1 1 LNSCETK 7 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 LNS(0.976)CET(0.024)K 103.88 0.010253 18869000.0 9321.1 10019.0 7275.0 5981.6 6960.3 6087.0 5596.3 6111.8 7659.8 13093.0 13088.0 True False 10894.273800984563 10528.924305390996 8306.70439335515 7447.092268524229 5936.449090253657 6731.1222997764135 6613.075270319467 6978.166366602501 5924.867530187106 10135.28220651658 9837.888389576023 1.1073792840065009 1.070242300832278 0.8443584704779457 0.7569807639223657 0.6034271639576404 0.6842039707330427 0.672204746429784 0.7093154638749906 0.6022499235166101 1.0302294359484367 1.0 13.264132972502495 -5.81366876984205 2.824707201197978 0.7645373241273101 1.1060327475239184 0.47271771516227923 0.1336950371360533 0.20795695464277264 3.275955684040973 0.022419453972035836 0.09642060475516236 1.5357878595591693e-06 5.81366876984205 0.3414954233966083 LNS(ph)CETK ddPTM_A549_PD325901_60min_R1 2 LNSCETK 7 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 LNS(0.822)CET(0.178)K;LNS(0.685)CET(0.315)K 78.932 0.01655 75987000.0 29441.0 34591.0 27750.0 26673.0 25898.0 25087.0 20617.8 22519.0 20741.9 31170.0 37382.0 True False 32429.82864668133 37506.10496712506 29633.28187430597 28320.530631221838 24079.013823249737 24882.69978956833 21402.421661493066 22069.840879186257 19870.190074900227 29201.92088049451 32784.25098402224 0.9891892501215402 1.1440281184219845 0.9038877200137367 0.8638455899152356 0.7344689325061874 0.7589833240873852 0.6528263119972992 0.6731842337939101 0.6060894935371309 0.8907301525578968 1.0 15.000715313789742 -6.109048373127674 2.018647642708856 0.7793067960093999 1.0660919328144598 0.5001829191706758 0.11334578898885632 0.29946750988150034 2.325221790228965 0.022610264957544292 0.08493278792995741 7.779498956318923e-07 6.109048373127674 0.2867851368050599 LNS(ph)FIQVDAPDQK ddPTM_A549_MK2206_60min_R1 2 LNSFIQVDAPDQK 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 LNS(1)FIQVDAPDQK;LNS(1)FIQVDAPDQK 111.74 4.0385e-05 3035500.0 1972.4299999999998 2542.3999999999996 2656.2 2179.2200000000003 3356.5 2482.0 2336.8999999999996 2503.1000000000004 3986.2 3741.4 3904.1000000000004 True False 2305.327962716415 2671.797300531596 3032.8891009800623 2713.128997828905 2862.7632963286633 2744.643592581741 2761.484480676441 2857.922090422252 3083.332064653368 2896.2151414848486 2934.604222321498 0.7855669071765743 0.9104455313629988 1.0334916981005409 0.924529780606194 0.975519381643906 0.9352687397179972 0.9410074652219691 0.9738696852829495 1.0506807157164841 0.986918481018786 1.0 11.518950230929065 -3.504324963677182 0.43605398519286 1.0125421998445316 2.4538846244895448e-58 0.529587337764281 0.04685166780760653 10.482815183564671 0.4040878888192982 0.010635063223255761 7.74047560208597 0.0003130942099772484 3.504324963677182 -1.0125421998445316 LNS(ph)GGGLSEELGSAR ddPTM_A549_PD325901_60min_R1 2 LNSGGGLSEELGSAR 15 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 LNS(0.978)GGGLS(0.022)EELGSAR;LNS(0.999)GGGLS(0.001)EELGSAR 61.211000000000006 0.0053082 9925000.0 5987.2 5500.9 4688.299999999999 5464.4 6596.1 6406.0 5920.200000000001 6763.9 6507.5 7101.0 7184.4 True False 6595.016136456316 5964.480148410232 5006.476231038149 5801.923577447177 6132.812691309666 6353.83165990253 6145.496450657743 6628.988708323097 6234.012405440833 6652.6416481357555 6300.764345663938 1.046700967477839 0.9466280313300195 0.7945823643576684 0.9208285311352656 0.9733442412475157 1.008422361371936 0.9753572921493171 1.05209278504203 0.989405739278435 1.0558467644824667 1.0 12.62131113721287 -6.882823175013354 3.67528614570866 0.9986129609569587 0.9191583042287149 0.2923715910861736 0.05987588566379842 0.2286956052008781 5.929619262292215 0.00824175561300375 0.016277585103870593 1.3097150709426572e-07 6.882823175013354 -0.07945465672824381 LNS(ph)PLLSNK ddPTM_A549_PD325901_60min_R1 2 LNSPLLSNK 9 0 P48552 P48552 NRIP1 Nuclear receptor-interacting protein 1 1 LNS(0.992)PLLS(0.008)NK;LNS(0.988)PLLS(0.012)NK 75.479 0.0020694000000000003 8656100.0 5062.299999999999 5215.200000000001 5412.1 5628.6 5919.3 5805.3 5373.4 5973.1 6318.6 5943.7 6408.8 True False 5576.22096933171 5654.703206745992 5779.3976516011335 5976.265838521919 5503.548788476419 5758.023561541083 5577.887677437303 5853.9618346937 6053.051215523389 5568.413767641809 5620.558228730448 0.9921115914835469 1.006075015439037 1.0282604354241454 1.0632868827820716 0.9791818827432629 1.024457594284489 0.9924081293073298 1.0415267659305032 1.0769484042674229 0.990722547660463 1.0 12.456497709383425 -8.295118109353277 24.221299860049466 1.037741291654112 1.0137925486727912 0.012025377913396973 0.030367840895888443 792.8463782009701 570203.3840815261 0.005585283578487483 0.006752553974087803 5.068528474326486e-09 8.295118109353277 -0.02394874298132077 LNS(ph)PPSSIYK ddPTM_A549_MK2206_60min_R1 2 LNSPPSSIYK 10 0 Q53EP0;Q53EP0-2;C9JKH7 Q53EP0 FNDC3B Fibronectin type III domain-containing protein 3B 1 LNS(0.996)PPS(0.004)SIYK;LNS(0.997)PPS(0.002)SIYK 154.94 1.6747e-08 99587000.0 16181.9 17480.0 16295.900000000001 14636.5 20160.0 16010.7 15895.699999999999 14978.7 24316.0 24700.0 24609.0 True False 18913.009110529023 18369.65733688339 18606.903659611846 18222.44315705745 17194.490705790522 17704.941646957475 18783.74293272646 17101.976595344888 18808.464824672923 19120.25284510499 18497.906126151927 1.0224405390289137 0.9930668483019696 1.0058924254840833 0.9851084243148452 0.9295371372590833 0.9571322032998439 1.0154523871310184 0.9245358084700459 1.0167888568794246 1.033644171113681 1.0 14.175074353405543 LNS(ph)PPSSIYK ddPTM_A549_PD325901_60min_R1 2 LNSPPSSIYK 10 0 Q53EP0;Q53EP0-2;C9JKH7 Q53EP0 FNDC3B Fibronectin type III domain-containing protein 3B 1 LNS(1)PPSSIYK;LNS(0.977)PPS(0.019)S(0.005)IYK 188.26 3.0024e-14 171580000.0 23367.0 23289.0 23661.0 24836.0 27621.0 26863.0 23868.0 26698.0 27751.0 26082.0 30097.0 True False 25739.200638123777 25251.64576275262 25266.77774515149 26370.063313351522 25680.996247277064 26644.23663439928 24776.309801070747 26165.487445824183 26584.721976702036 24435.178068818037 26395.259800602344 0.9751448113246608 0.9566735070429719 0.9572467911293261 0.9990454162057444 0.9729397036164433 1.0094326343319893 0.9386651235198431 0.9912949386930104 1.0071778863906227 0.9257411464561687 1.0 14.68799124564119 -8.515302262261443 23.776703324540197 1.0031709750319395 0.9733122171864393 0.0 0.02973708076757311 145.20756511248211 455695.6808130236 0.002928048085063889 0.0033921235501558045 3.0527956749575432e-09 8.515302262261443 -0.029858757845500183 LNS(ph)SDPSLIGLK ddPTM_A549_MK2206_60min_R1 1 LNSSDPSLIGLK 12 0 Q9UHI6 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 LNS(0.633)S(0.159)DPS(0.208)LIGLK 50.207 0.029562 737720.0 960.78 844.94 856.63 864.04 1261.8 873.52 852.9 754.94 1068.3 1537.7 1008.2 True False 1122.9361751842541 887.9438369694652 978.1130150487727 1075.729838788229 1076.190891496353 965.955306604352 1007.8608898835789 861.9550569067861 826.3317557245473 1190.3325020209684 757.8361150955493 1.4817665096927617 1.1716831901809162 1.2906656143267208 1.4194755533029713 1.4200839337943996 1.2746229525925439 1.3299193187124714 1.1373897861783868 1.0903831834675257 1.5706990974834831 1.0 9.565742083682748 -8.470501769072584 1.21141514008644 1.0325351772196827 1.345403291236809 0.0 0.1811903765375289 0.15592237611401455 0.44380650329195476 0.01580586195954073 0.018959101908780033 3.3845289319589383e-09 8.470501769072584 0.31286811401712633 LNS(ph)SENGEDR ddPTM_A549_MK2206_60min_R1 2 LNSSENGEDR 10 0 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 LNS(0.5)S(0.5)ENGEDR;LNS(0.517)S(0.483)ENGEDR 142.97 4.6974e-08 190726000.0 5431.9 5329.200000000001 5042.0 4163.6 5318.299999999999 4167.0 4089.1 4460.2 5418.700000000001 6700.9 7606.2 True False 6348.671922795387 5600.433517146395 5757.031415985796 5183.682186911109 4535.985115109409 4607.949174169261 4832.036539832269 5092.447008789632 4191.373101885806 5187.162036022835 5717.370619559378 1.1104181179153052 0.9795470487757195 1.0069368944337345 0.9066549174156217 0.7933690881594423 0.8059560033427364 0.845150133052711 0.8906973760574739 0.7330945255756087 0.9072635624280372 1.0 12.481136098402311 -6.178869445308384 1.9007754442155023 0.8601840679071147 1.048365131110411 0.5508071377703836 0.07079509070894505 0.30152743771295076 2.064817188686073 0.014528811725880775 0.052791485199567986 6.62415604706175e-07 6.178869445308384 0.1881810632032963 LNS(ph)SENGEDR ddPTM_A549_PD325901_60min_R1 2 LNSSENGEDR 10 0 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 LNS(0.5)S(0.5)ENGEDR;LNS(0.5)S(0.5)ENGEDR 199.12 2.3040999999999997e-19 140699000.0 7130.9 7427.200000000001 7894.8 7415.7 9016.6 7445.4 7234.799999999999 8182.7 8244.2 8650.2 9649.3 True False 7854.823718508876 8053.116209760668 8430.58860328904 7873.7509467233485 8383.305121581345 7384.767130914506 7510.1242730344675 8019.489629296034 7897.724943977768 8104.024895747635 8462.497271952427 0.9281921714223074 0.9516240834075557 0.9962294027828944 0.9304287722277462 0.9906419880767877 0.8726463233719576 0.8874595798010542 0.947650483253369 0.9332617417973645 0.9576398828047024 1.0 13.046867748269504 -10.624147632077202 0.8846095393422225 1.0002597287589874 0.9379898508189292 0.1222628129682588 0.03696246388640028 0.6229582533971001 0.8632383103636634 0.024887221752842397 0.006620739626430213 2.376032451736889e-11 10.624147632077202 -0.06226987794005823 LNS(ph)SIVEPKEPAPETADGPYLVIVEQPK ddPTM_A549_MK2206_60min_R1 1 LNSSIVEPKEPAPETADGPYLVIVEQPK 28 1 Q00653-4;Q00653-3;Q00653 Q00653-4 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit 1 LNS(0.5)S(0.5)IVEPKEPAPETADGPYLVIVEQPK 99.37200000000001 4.4773e-11 2134200.0 417.12 566.85 439.32 524.23 717.0 429.12 392.89 552.64 916.29 502.08 409.07 True False 487.5196583951122 595.7002437878916 501.6221820053312 652.6663735335786 611.5302498041563 474.5291935731976 464.2730273494654 630.9784123890188 708.7517780144582 388.6597792902959 307.48662924234907 1.5854987242741798 1.937320804015786 1.6313625839319732 2.1225845661704277 1.9888027369221697 1.5432514732183429 1.5098966367852806 2.0520515443021297 2.304984056577782 1.2639892025482815 1.0 8.26437986739684 -10.984604718014662 1.2645577138365256 1.0012261316753333 1.8935957367288052 0.5238198011861728 0.2600057866775596 0.2600260291460003 0.7414716477342717 0.19837667368175615 0.04581351695353284 1.036084751337721e-11 10.984604718014662 0.892369605053472 LNS(ph)SIVEPKEPAPETADGPYLVIVEQPK ddPTM_A549_PD325901_60min_R1 2 LNSSIVEPKEPAPETADGPYLVIVEQPK 28 1 Q00653-4;Q00653-3;Q00653 Q00653-4 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit 1 LNS(0.5)S(0.5)IVEPKEPAPET(0.001)ADGPYLVIVEQPK;LNS(0.554)S(0.446)IVEPKEPAPETADGPYLVIVEQPK 97.43700000000001 1.4588e-10 5480000.0 1198.81 1127.17 1772.1 1966.9299999999998 2049.78 1524.79 1904.07 2039.19 1777.4499999999998 1815.1999999999998 2178.8599999999997 True False 1320.5123086827227 1222.1605717034593 1892.3653625029772 2088.422798877859 1905.810524157111 1512.3726157825133 1976.530425797082 1998.5167557363916 1702.7499577488763 1700.5879622160296 1910.8740329315347 0.6910514696025679 0.6395819664933656 0.9903140290204464 1.0929149503768916 0.9973501608755154 0.7914559461893638 1.034359351654814 1.0458652539594153 0.8910843563751984 0.8899529392877361 1.0 10.900016961954508 -5.761407380792932 24.999999995087965 0.9643040614918305 0.6653166282098019 0.6747698694650515 0.0815942119725698 0.34663170322800013 269323.8224444304 0.011320588439631364 0.038895711505711646 1.732178401973405e-06 5.761407380792932 -0.2989874332820286 LNSCET(ph)K ddPTM_A549_MK2206_60min_R1 1 LNSCETK 7 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 LNS(0.334)CET(0.666)K 87.806 0.013632 17543000.0 7738.2 7428.3 6085.1 4400.1 5406.2 4843.2 4344.3 3835.4 5539.8 10791.0 10541.0 True False 9044.218979173995 7806.36874116538 6948.058680962949 5478.124697527994 4610.955141549837 5355.704209344029 5133.603076469963 4379.079695419881 4285.044145242765 8353.305605325011 7923.3787831999425 1.1414598779942953 0.9852323048996899 0.8769060360581298 0.6913874557080804 0.5819430406793771 0.6759369147793121 0.647905800913471 0.552678322624801 0.5408102102007805 1.0542605413534751 1.0 12.951900057679836 -5.753231430802602 1.8001287320349182 0.7263894769404454 1.129048896194922 0.41806894551089524 0.1605839978302478 0.3721516804987014 2.110266444420422 0.02699658274683993 0.1836892837970259 1.7650969690599053e-06 5.753231430802602 0.4026594192544767 LNSEAS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 LNSEASPSR 9 0 Q13111;Q13111-3;Q13111-2;K7EJF1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 LNSEAS(1)PSR 105.94 0.00054741 55565000.0 2689.0 2632.5 2455.7 2043.1 3399.2 2823.5 2184.4 2423.6 3518.1 3437.8 3616.1 True False 3142.8374602619315 2766.4830056833807 2803.9551860841584 2543.659591718244 2899.182182893011 3122.2808959123886 2581.2772046684136 2767.1527219637132 2721.2559672512693 2661.1985923442076 2718.122570717134 1.156253030720665 1.0177918521729827 1.0315779046507012 0.9358148963264521 1.0666120115871403 1.1486902502298209 0.9496544535838883 1.0180382414593039 1.0011527797045991 0.9790576116816145 1.0 11.40839479896411 LNSS(ph)IVEPKEPAPETADGPYLVIVEQPK ddPTM_A549_MK2206_60min_R1 1 LNSSIVEPKEPAPETADGPYLVIVEQPK 28 1 Q00653-4;Q00653-3;Q00653 Q00653-4 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit 1 LNS(0.194)S(0.805)IVEPKEPAPET(0.001)ADGPYLVIVEQPK 49.626000000000005 0.0028511 1862800.0 343.28 455.62 366.75 212.0 466.43 346.01 537.73 543.19 579.18 577.39 550.97 True False 401.2172716097863 478.8091118896346 418.76066477841937 263.9400095170416 397.8187648760849 382.6245485371506 635.4285805101379 620.1888459496076 447.99665476040747 446.95719798522924 414.14894300158153 0.9687753123355288 1.1561278133886392 1.011135418440076 0.6373069736798378 0.9605693111102924 0.9238815044752859 1.5342996553481758 1.4975019408590868 1.0817283548124297 1.0792184926173345 1.0 8.6940058963542 -7.625031124803699 21.747895675345863 1.1200458602390884 0.9425855393733699 0.2606862433390328 0.20813450723781107 7.962611955191408 1673.1388578672925 0.036032623550450664 0.05344500143289932 2.371203761305034e-08 7.625031124803699 -0.1774603208657185 LNSSDPS(ph)LIGLK ddPTM_A549_PD325901_60min_R1 1 LNSSDPSLIGLK 12 0 Q9UHI6 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 LNS(0.228)S(0.319)DPS(0.453)LIGLK 56.225 0.010288 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LNSSGSSEDS(ph)FVEIR ddPTM_A549_MK2206_60min_R1 1 LNSSGSSEDSFVEIR 15 0 Q96CV9-3;Q96CV9-2;Q96CV9;A0A087WY28 Q96CV9-3 OPTN Optineurin 1 LNSSGS(0.001)S(0.009)EDS(0.99)FVEIR 176.94 1.2720000000000002e-27 5947900.0 3864.7 4173.9 3377.3 3520.6 4726.9 3647.7 3665.1 3169.9 5417.2 5835.5 5773.7 True False 4516.966877156669 4386.333681831666 3856.2519240795014 4383.147158045742 4031.5792716865662 4033.6971928527037 4331.001228177166 3619.2430324116085 4190.212849490799 4517.256497069236 4339.930943986482 1.040792338738821 1.0106920452062678 0.8885514479032948 1.0099578114530006 0.9289500970684395 0.9294381051020861 0.9979424290559994 0.8339402352534027 0.9655021942911014 1.0408590724994047 1.0 12.083456371672657 -9.91453247790469 1.391068395954325 0.9935374058026423 0.9547165367020545 0.12017986846037798 0.058926386811932144 0.7390772163497084 2.868403247367408 0.015583930021653637 0.010044908655210915 1.2174959412722982e-10 9.91453247790469 -0.038820869100587796 LNSSSSSSSNSSNEREDFDSTSSS(ph)SSTPPLQPR ddPTM_A549_MK2206_60min_R1 2 LNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 33 1 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 LNSSSSSSSNSSNEREDFDS(0.01)T(0.01)S(0.01)S(0.043)S(0.232)S(0.232)S(0.232)T(0.232)PPLQPR;LNSSSSSSSNSSNEREDFDS(0.023)T(0.023)S(0.023)S(0.183)S(0.236)S(0.236)S(0.236)T(0.038)PPLQPR 153.97 9.595900000000002e-43 28322000.0 2553.9 2413.34 2478.2 2486.9 3253.8 2619.23 2093.73 2093.3 3806.2 3718.4 4078.3 True False 2984.935883139809 2536.1686977914273 2829.6460244141203 3096.190611641184 2775.1703302827964 2896.395180095839 2474.1336393199035 2390.0316854623866 2944.101777252432 2878.410857459045 3065.54555464608 0.9737046244887471 0.8273139813393608 0.9230481080685835 1.0099966079279623 0.9052777982949245 0.9448220972303347 0.8070777599667882 0.7796431802620262 0.9603842855280391 0.9389554994857547 1.0 11.581928128217157 -8.979320038575045 22.430048675150843 0.9825227850955891 0.8959442546010007 0.1709015468245645 0.06782481542125396 46.27722416809495 50195.18806429046 0.012153878206461622 0.012440459888339236 1.0487692888938445e-09 8.979320038575045 -0.08657853049458841 LNSSSSSSSNSSNEREDFDSTSSSSST(ph)PPLQPR ddPTM_A549_PD325901_60min_R1 2 LNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 33 1 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 LNSSSSSSSNSSNEREDFDS(0.001)T(0.001)S(0.001)S(0.001)S(0.005)S(0.007)S(0.354)T(0.63)PPLQPR;LNSSSSSSSNSSNEREDFDS(0.037)T(0.037)S(0.028)S(0.028)S(0.037)S(0.049)S(0.186)T(0.599)PPLQPR 136.67 2.7342e-30 36625000.0 3037.5 2618.87 2941.5 3096.1 3662.3 3184.9 2865.0 4073.1 3427.9 3295.1 3592.8999999999996 True False 3345.8647639106853 2839.5713658250625 3141.1278786764356 3287.339065246724 3405.0726822491147 3158.9632303502317 2974.029142788156 3991.8588252148647 3283.8372838433565 3087.0468236547176 3150.9960772696354 1.0618435192753097 0.901166264949963 0.9968682288548735 1.0432698056848204 1.0806337420767718 1.0025284554106777 0.9438377801362346 1.2668561709774784 1.0421584804665416 0.979705067208357 1.0 11.62159224298226 -6.111683709191834 4.800971128403624 1.0367231819889617 0.9745675348256317 0.07660585105827789 0.0865788010803401 0.4336941607845927 15.380730829670261 0.011515481330189726 0.03194460698195955 7.732435228997077e-07 6.111683709191834 -0.06215564716333 LNT(ph)SDFQK ddPTM_A549_MK2206_60min_R1 1 LNTSDFQK 8 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.5)S(0.5)DFQK 152.64 0.00056504 470080000.0 3308.3 3978.5 4952.7 7717.8 17426.0 15554.0 17078.0 16875.0 28637.0 25944.0 28703.0 True False 3866.6601598306265 4180.988656452551 5655.067333191763 9608.661346465207 14862.658484082618 17199.913956090404 20180.851538787374 19267.08292752009 22150.765223892045 20083.23238110945 21575.252937500045 0.17921737330411394 0.1937863101102076 0.26210897038257497 0.44535567551861 0.6888752835082533 0.7972056691949672 0.9353703336525406 0.8930177079885763 1.0266746484066336 0.9308457443946204 1.0 14.397089852489621 -6.805105859492421 0.778249348746134 1.0097966655895414 0.12153727217021797 0.9839651501405924 0.04050164507561113 0.046216045972460124 0.05028721626081548 0.005799462031043756 0.022578336625031458 1.5663692203082817e-07 6.805105859492421 -0.8882593934193235 down LNT(ph)SDFQK ddPTM_A549_PD325901_60min_R1 4 LNTSDFQK 8 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.891)S(0.109)DFQK;LNT(0.5)S(0.5)DFQK;LNT(0.5)S(0.5)DFQK;LNT(0.5)S(0.5)DFQK 170.02 6.5762e-06 2198764000.0 106742.0 103624.0 108384.0 105262.0 115156.0 106682.0 110848.0 112785.0 116803.0 109917.0 118928.0 True False 117578.36926069285 112356.7581484597 115739.59000593815 111763.79467265286 107067.83982663331 105813.21716230428 115066.38129835302 110535.4146968794 111894.17610337383 102976.82186144743 104300.60994670689 1.1273027964148084 1.0772397036399803 1.1096731847021422 1.071554564539549 1.0265312914405809 1.0145023813031417 1.103218680668761 1.0597772606829263 1.0728046188852292 0.9873079545178514 1.0 16.670388069154665 -14.999999999999998 0.14497269362412732 0.745117276381864 1.0989224738089693 0.5321796042857285 0.030256047006469233 45.005592701016866 0.43393791985951674 3.318931208264365 0.06726792253582739 1.000000000000004e-15 14.999999999999998 0.35380519742710537 LNTLLQR ddPTM_A549_PD325901_60min_R1 2 LNTLLQR 7 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4;A0A1W2PPE9 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 107.9 0.025247 9538400.0 3506.0 4302.1 3575.3 3780.4 4507.6 3790.7 3719.3999999999996 3687.3 4451.6 4129.1 5051.6 False True 3861.9265390192154 4664.653065221264 3817.9413580254477 4013.906722088665 4191.001726375806 3759.829796002581 3860.943802333773 3613.753908869108 4264.514732856001 3868.387921323384 4430.285224730798 0.8717105881718669 1.0529012983593413 0.8617822926417658 0.9060154185293038 0.9459891437645458 0.8486654030793341 0.8714887657302876 0.8156932850951361 0.9625824335305927 0.8731690455795524 1.0 12.113183868105654 -8.970047344443815 15.924271862791658 0.9834967010564054 0.899618881976709 0.02140234651491002 0.06793895509689026 3.250136339226737 1727.8573075621064 0.010321696575540785 0.010820179837217583 1.0714025003446694e-09 8.970047344443815 -0.08387781907969638 LNTS(ph)DFQK ddPTM_A549_MK2206_60min_R1 1 LNTSDFQK 8 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.273)S(0.727)DFQK 143.24 0.00097088 494780000.0 4221.3 4422.7 6262.3 10360.0 25106.0 22368.0 24264.0 24274.0 36511.0 32409.0 35569.0 True False 4933.752239123725 4647.796539120948 7150.3883054993785 12898.200465078075 21412.940657717103 24734.966913323267 28672.454721696748 27714.91383600724 28241.316796086274 25087.78439097197 26736.23564554014 0.1845342891397923 0.17383885303600116 0.2674418493424721 0.48242395212542266 0.8008958681245386 0.9251476999698459 1.0724192852661212 1.036604935842206 1.0562936821211477 0.9383439285760804 1.0 14.706508733619012 -6.692928523794506 1.2510961537337697 1.0314254458701249 0.16501095418706502 0.9878966798936506 0.038661739170945064 0.02540673001476069 0.07793965622019776 0.004810592931794067 0.014462719167239506 2.028016463098077e-07 6.692928523794506 -0.8664144916830598 down LNTVAS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LNTVASPK 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNTVAS(1)PK;LNTVAS(1)PK 87.568 0.0027072 20905200.0 7988.5 8549.0 7027.599999999999 7940.4 12636.1 10907.5 9237.7 10512.2 14346.0 10815.6 12468.2 True False 9336.763499926536 8984.107584268659 8024.219353229229 9885.798356458095 10777.346428940458 12061.724410187488 10916.0705152744 12002.33654226231 11096.653905854497 8372.348448239578 9372.0018351858 0.9962400417884077 0.9586113769780914 0.8561905443833226 1.0548224947356841 1.14995137842147 1.2869955237208257 1.164753348029833 1.2806587912948657 1.18402173847147 0.8933361938542126 1.0 13.19414152136561 -6.489633540387608 4.924272217657728 1.1281376532352427 0.9397072814936495 0.381763492322286 0.11105965141177862 0.16601506297231874 10.071726772082647 0.015675680892436077 0.03612564668885533 3.238668219270318e-07 6.489633540387608 -0.18843037174159327 LNTVAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LNTVASPK 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNT(0.004)VAS(0.996)PK;LNT(0.002)VAS(0.998)PK 72.2 0.0057672 12153700.0 7811.799999999999 8629.4 6911.9 7306.7 9397.400000000001 7955.7 7236.200000000001 8391.0 8757.9 8925.0 9834.8 True False 8604.84818525679 9356.629822881934 7380.983098631188 7758.018264280307 8737.359043270026 7890.911416903924 7511.577550800582 8223.634922387844 8389.835919417637 8361.47397684997 8625.181947933808 0.9976425120304981 1.084803761748278 0.8557481040036875 0.8994614039578338 1.0130057656769884 0.9148689806821082 0.8708891703554156 0.9534448052261487 0.9727140795479047 0.9694258077480892 1.0 13.074339175366415 -9.15372878511519 1.7120901275696119 0.9910155148330684 0.9475042661697524 0.04538252190639602 0.06327568613090899 0.6561509569097825 3.964497984637333 0.01344734635805101 0.012528575195899906 7.018934908029138e-10 9.15372878511519 -0.043511248663316016 LNTVAS(ph)PKDCQELASISVGSGSR ddPTM_A549_MK2206_60min_R1 2 LNTVASPKDCQELASISVGSGSR 23 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNTVAS(1)PKDCQELASISVGSGSR;LNTVAS(1)PKDCQELASISVGSGSR 144.28 1.1784e-27 17065200.0 4747.0 5478.299999999999 4704.799999999999 4988.5 6497.2 5422.0 4207.700000000001 4387.2 6878.5 7306.6 7363.8 True False 5548.177546992705 5757.122070288805 5372.0113855474 6210.682723942272 5541.470486788796 5995.752441167687 4972.184624649001 5009.099035236506 5320.530732707389 5656.033985345917 5535.165229459036 1.0023508453667138 1.0400994065449898 0.9705241240056747 1.1220410713103963 1.00113912721091 1.0832111043871522 0.898290189818768 0.9049592609408078 0.9612234706907523 1.0218365217434882 1.0 12.434410668003741 -7.7490621161518956 24.999894166423726 0.9685620429191396 1.0359954808447134 0.36160192255905355 0.05147573360735201 221.7440363806775 447882.77805586066 0.007679679267891275 0.011344890285854115 1.78212385609733e-08 7.7490621161518956 0.06743343792557377 LNTVAS(ph)PKDCQELASISVGSGSR ddPTM_A549_PD325901_60min_R1 2 LNTVASPKDCQELASISVGSGSR 23 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNT(0.001)VAS(0.999)PKDCQELASISVGSGSR;LNT(0.001)VAS(0.999)PKDCQELASISVGSGSR 104.29 7.542899999999999e-14 9601300.0 2887.1 3596.3 3751.3 3355.3 3401.9 2983.3 3422.5 3978.2 3454.9 3292.0 3491.9 True False 3180.196266629314 3899.372822215949 4005.885776399427 3562.549260560817 3162.962279917883 2959.0049939099626 3552.7451103638614 3898.851680162474 3309.7025677383854 3084.142558183766 3062.418436977883 1.038459091099144 1.2732985065437386 1.3080791729926349 1.163312373496707 1.0328315169886517 0.9662314457687327 1.1601109330669561 1.2731283331777536 1.0807479891626215 1.0070937795252177 1.0 11.580455705223171 -13.354308185455757 0.09310083676522934 0.6117575676577461 1.2834019894081103 0.205141221259328 0.1049271170849149 90.66861361976784 0.8804380864065108 7.9563910054706755 1.1447000454272156 4.4227441277916295e-14 13.354308185455757 0.6716444217503642 LNTVAS(ph)PKDCQELASISVGSGSRPSSDLQAR ddPTM_A549_MK2206_60min_R1 2 LNTVASPKDCQELASISVGSGSRPSSDLQAR 31 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNTVAS(1)PKDCQELASISVGSGSRPSSDLQAR;LNT(0.001)VAS(0.999)PKDCQELASISVGSGSRPSSDLQAR 129.61 2.2948999999999997e-28 28686000.0 3043.3999999999996 3627.7999999999997 3155.0 3073.7 3634.3 3023.8 3156.3999999999996 3292.9 3978.3999999999996 4970.5 4188.2 True False 3557.0515160138198 3812.4395244133625 3602.4264413794504 3826.7566379836376 3099.6992843280977 3343.7765089640097 3729.8770228966223 3759.6786590833094 3077.2987521993246 3847.660597837828 3148.1543515603826 1.129884725712628 1.211007815586846 1.1442979088982432 1.2155555956419055 0.9846084207376083 1.062138680495976 1.1847821314885367 1.1942485149178994 0.9774929716117832 1.2221956639231286 1.0 11.620290561457823 -8.77168302798802 24.985494196337545 0.989371666896107 1.1393987315663436 0.0 0.09558463652588535 118.73220039455492 289601.23766777106 0.011587620332235652 0.012403825369332686 1.6916751588082663e-09 8.77168302798802 0.15002706467023663 LNTVAS(ph)PKDCQELASISVGSGSRPSSDLQAR ddPTM_A549_PD325901_60min_R1 2 LNTVASPKDCQELASISVGSGSRPSSDLQAR 31 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNT(0.002)VAS(0.998)PKDCQELASISVGSGSRPSSDLQAR;LNT(0.001)VAS(0.999)PKDCQELASISVGSGSRPSSDLQAR 98.34200000000001 1.7654e-10 53834000.0 4286.0 4402.2 3906.2000000000003 4347.9 5136.3 4878.8 5568.6 5317.6 4252.200000000001 5573.799999999999 4936.4 True False 4721.111564813565 4773.188843522243 4171.298221888793 4616.459908202655 4775.544007273062 4839.068670360983 5780.516120254846 5211.536296423498 4073.49482142382 5221.869316769344 4329.254094417831 1.09051385339128 1.1025430107410015 0.9635142985179116 1.066340715402949 1.1030870221802596 1.1177603727627146 1.3352221870525647 1.2037954305207652 0.9409230164328335 1.2061822205128723 1.0 12.079902762966698 -8.773937692660317 24.97057929801028 0.9721025256415066 1.12122661218698 0.0 0.11227989788789337 186.091967103375 371794.73479655286 0.016704053546579112 0.017842817784766565 1.6829154881892297e-09 8.773937692660317 0.1491240865454735 LNTVDDQKAGS(ph)PSRDVGPSLGLK ddPTM_A549_PD325901_60min_R1 1 LNTVDDQKAGSPSRDVGPSLGLK 23 2 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 LNT(0.01)VDDQKAGS(0.775)PS(0.204)RDVGPS(0.011)LGLK 42.181000000000004 0.014266999999999998 5007600.0 2711.7 2774.6 3271.3 3927.5 3813.0 5344.7 4183.9 4289.2 4334.8 4350.9 3980.6 True False 2986.989787751968 3008.4252794595473 3493.310089924944 4170.09275500033 3545.1880341358897 5301.174535229638 4343.120604017927 4203.648541187692 4152.623430673057 4076.1834314707608 3491.0114351024254 0.8556230316857528 0.8617632269002524 1.000658449525374 1.1945228002033115 1.0155188832923072 1.5185211030608106 1.2440866163735442 1.2041348529883455 1.1895187133786114 1.1676224805465774 1.0 11.769429367229792 -5.969543504926412 2.7881300349881126 1.141509920223529 0.8552841271899805 0.46082547098100335 0.13460923916269324 0.2270975580049963 3.534263056740856 0.021399868900843194 0.07825954418079763 1.0726461914137454e-06 5.969543504926412 -0.28622579303354856 LNTVDDQKAGSPS(ph)RDVGPSLGLK ddPTM_A549_PD325901_60min_R1 1 LNTVDDQKAGSPSRDVGPSLGLK 23 2 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 LNT(0.001)VDDQKAGS(0.431)PS(0.561)RDVGPS(0.007)LGLK 56.573 0.00082956 5806500.0 2389.1 2526.2 2808.5 2982.7 3313.1 4579.5 3388.4 3592.5 4051.1 3219.6 3614.9 True False 2631.6396732375356 2739.09173969967 2999.1016988824645 3166.93460479681 3080.3992855745128 4542.206070328383 3517.347416203625 3520.844769238272 3880.846355079733 3016.313906539625 3170.2902167391235 0.8300942479469183 0.8639876959015529 0.946002256527562 0.9989415442395161 0.9716458352330059 1.4327414084507304 1.1094717441425521 1.110574909088203 1.224129682067867 0.9514314779806264 1.0 11.630399199186247 -6.490850437834971 1.4809215245474991 1.1276860798150663 0.86101348258731 0.4239027666584818 0.12485152520168113 0.3078114927030526 1.3047603787335045 0.019132081747250618 0.06117367411316685 3.2296061407319045e-07 6.490850437834971 -0.26667259722775627 LNVLEKS(ph)SPGHR ddPTM_A549_MK2206_60min_R1 1 LNVLEKSSPGHR 12 1 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;H0YCK7 P29692 EEF1D Elongation factor 1-delta 1 LNVLEKS(0.5)S(0.5)PGHR 53.376999999999995 0.0096315 2728500.0 697.85 678.43 826.31 500.49 917.06 665.95 508.7 363.75 929.08 1153.3 1277.7 True False 815.6300192055747 712.9591891911786 943.49318313035 623.1100724678497 782.1616888220361 736.4203869781671 601.124205280545 415.3126764376551 718.6448634358916 892.7687289983633 960.4118272739365 0.8492502862242804 0.7423473648953955 0.9823839693940369 0.648794667842133 0.8144023913597032 0.7667756331869071 0.6259025432733321 0.4324318637521279 0.748267402615934 0.9295686534103046 1.0 9.907509359944877 -10.367304937566287 1.018117448727598 0.9827423223017617 0.7356792043768434 0.2995106373158669 0.13399051300622378 0.4295303832196349 0.8671193084120489 0.0637573081920715 0.025347388493974932 4.2923493589926406e-11 10.367304937566287 -0.2470631179249183 LNVLEKS(ph)SPGHR ddPTM_A549_PD325901_60min_R1 2 LNVLEKSSPGHR 12 1 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;H0YCK7 P29692 EEF1D Elongation factor 1-delta 1 LNVLEKS(0.651)S(0.349)PGHR;LNVLEKS(0.623)S(0.377)PGHR 110.44 3.4693e-05 11001900.0 1303.77 1427.52 1515.42 2162.3 2202.06 3472.8 2462.1 2974.6 2491.1000000000004 2110.79 2385.0 True False 1436.1277706152534 1547.8221202818754 1618.2655141607493 2295.8603600603965 2047.394902294591 3444.518668203172 2555.796562812815 2915.269269471442 2386.4077300336025 1977.514359170324 2091.6601197606615 0.6865970991403625 0.7399969553652843 0.7736751773734251 1.0976259184609307 0.978837279992155 1.646786987838785 1.2218985956022637 1.3937585948739235 1.140915633227576 0.9454281508205078 1.0 11.03043272736915 -6.257815381742025 2.114660499052835 1.144230546280517 0.7067047977341699 0.5101975226361386 0.1930424827963382 0.2345470555268136 2.013459443992856 0.02934936402912634 0.09368572645101346 5.523121768752773e-07 6.257815381742025 -0.43752574854634696 LNVLEKSS(ph)PGHR ddPTM_A549_MK2206_60min_R1 1 LNVLEKSSPGHR 12 1 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;H0YCK7 P29692 EEF1D Elongation factor 1-delta 1 LNVLEKS(0.19)S(0.81)PGHR 64.104 0.0028005 1504700.0 666.98 654.66 677.91 511.47 1029.7 485.69 547.58 636.48 1005.3 1313.6 1269.2 True False 779.5499179046127 687.9793977210571 774.047831656274 636.780172960761 878.2324940353415 537.0853934250708 647.068198009673 726.7029891382504 777.6011551342203 1016.8568476651777 954.0226118620022 0.817118911241669 0.7211353160469661 0.8113516619333953 0.6674686375807518 0.9205573150108692 0.5629692491007323 0.6782524753231638 0.7617251206655538 0.8150762313867452 1.065862417747667 1.0 9.89787965059102 -9.878141568446875 0.7171098375535205 0.9873006054533466 0.7402596904531842 0.5700570785809815 0.09316719387473071 0.349614140278675 0.37091113665838993 0.040716302578280864 0.018935435348642053 1.3239099054414821e-10 9.878141568446875 -0.24704091500016245 LNYSDES(ph)PEAGK ddPTM_A549_MK2206_60min_R1 2 LNYSDESPEAGK 12 0 Q9GZR1-2;Q9GZR1 Q9GZR1-2 SENP6 Sentrin-specific protease 6 1 LNYS(0.002)DES(0.998)PEAGK;LNYSDES(1)PEAGK 153.14 8.611e-13 23793000.0 9780.6 10904.5 10478.6 10307.4 13749.2 10193.0 11791.7 11315.5 17117.7 17609.699999999997 16440.0 True False 11431.32616728816 11459.492473114693 11964.623045527329 12832.713462716776 11726.710893455109 11271.616494434202 13934.099255762916 12919.506777265386 13240.568281349895 13631.65653953219 12357.494279082346 0.9250521108181357 0.9273314002266859 0.9682078563273111 1.0384559501224158 0.9489553973174828 0.9121279961677813 1.1275829016040335 1.0454794868191333 1.0714606037700003 1.1031084645215359 1.0 13.59309861812979 -7.743236196453849 24.999997354504824 1.042067228464742 0.9565155831540711 0.5746967896823894 0.04710170001536589 180.71669020697297 248193.33959642937 0.0074012271275750935 0.010966153847273837 1.8061915391129937e-08 7.743236196453849 -0.08555164531067094 LNYSDES(ph)PEAGK ddPTM_A549_PD325901_60min_R1 2 LNYSDESPEAGK 12 0 Q9GZR1-2;Q9GZR1 Q9GZR1-2 SENP6 Sentrin-specific protease 6 1 LNYSDES(1)PEAGK;LNYSDES(1)PEAGK 191.01 1.0810000000000001e-19 32305000.0 13142.7 14719.400000000001 15417.8 14915.0 15509.099999999999 15598.5 15816.2 15011.2 15839.0 16442.9 17742.6 True False 14476.937228855619 15959.855495738788 16464.14462276305 15836.265675577313 14419.794319490416 15471.470987666196 16418.09414595674 14711.789839941419 15173.34191160621 15404.692487837128 15560.372679608174 0.9303721399827143 1.0256730879366491 1.0580816386447651 1.0177304876721043 0.9266998044582517 0.9942866604950611 1.0551221673162499 0.945465133956668 0.9751271530591831 0.9899950859162221 1.0 13.925588993638582 LPAFLDNHNYAKS(ph)PMQEEEDLAAGVGR ddPTM_A549_PD325901_60min_R1 1 LPAFLDNHNYAKSPMQEEEDLAAGVGR 27 1 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 LPAFLDNHNYAKS(1)PMQEEEDLAAGVGR 96.686 1.2654000000000002e-09 2409600.0 1434.7 1498.6 1392.1 1551.2 1320.5 1866.0 1519.5 1948.5 1789.1 1395.9 2003.0 True False 1580.3496878296817 1624.892281337157 1486.576277377346 1647.0141009691947 1227.7526354776935 1850.803914670329 1577.3254040023055 1909.6356389313198 1713.910348762843 1307.7626357742154 1756.6436980631456 0.8996415662277765 0.9249982128582728 0.8462594201752053 0.9375914437203019 0.6989195571255565 1.0536023421886882 0.8979199400205321 1.0870933252069621 0.975673297124841 0.7444666423909065 1.0 10.778605882288982 -7.308280686574258 24.999529889267052 0.9929787380432648 0.8683928882515833 0.13802377625054751 0.10525131793787117 282.16938090592214 150595.16640524173 0.009946004868097965 0.01589981623281794 4.917216309490129e-08 7.308280686574258 -0.12458584979168141 LPAKLS(ph)ISK ddPTM_A549_MK2206_60min_R1 2 LPAKLSISK 9 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 LPAKLS(0.989)IS(0.011)K;LPAKLS(0.992)IS(0.008)K 82.54299999999999 0.00041957 259670000.0 8429.3 8182.6 8464.4 6902.5 11085.900000000001 9298.3 8627.8 9994.099999999999 10998.7 9269.2 9814.599999999999 True False 9851.95976340123 8599.05938928959 9664.779198228918 8593.612809865002 9455.178795402926 10282.239934287996 10195.359579947873 11410.794280647604 8507.51201131478 7175.281282261013 7377.363950820048 1.3354308976861733 1.1656005378904672 1.3100586147921587 1.164862255292388 1.281647328020453 1.3937552766588193 1.3819786644543388 1.5467305607688246 1.1531913116973318 0.9726077403926139 1.0 12.848889695197439 -9.07193761229111 3.3069158939908787 1.0598485874665677 1.3157567479108063 0.573335201360119 0.1080608906133869 0.13394030198617218 3.0542619289648036 0.021422070528395037 0.021179124340092916 8.473491296496907e-10 9.07193761229111 0.2559081604442386 LPAKLS(ph)ISK ddPTM_A549_PD325901_60min_R1 3 LPAKLSISK 9 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 LPAKLS(0.983)IS(0.017)K;LPAKLS(0.993)IS(0.007)K;LPAKLS(0.994)IS(0.006)K 105.65 0.00015603 501859900.0 36147.3 34802.9 37949.9 33965.6 40385.1 31155.3 37973.9 39148.7 34854.0 38436.0 39777.3 True False 39816.94728576421 37735.862523788164 40525.40842528738 36063.577970525585 37548.589897031576 30901.58156630679 39419.01754461542 38367.84846693896 33389.207588049925 36009.144400471196 34884.944269079955 1.1413791284469874 1.0817234573378722 1.1616876355799948 1.0337863145875885 1.0763551636317943 0.8858142735717714 1.1299722092305078 1.0998397523869934 0.9571237187741255 1.0322259403002019 1.0 15.090316908396249 -6.029186376548747 0.3634313152634437 0.9823219805782134 1.2017925585511724 0.21808031957293894 0.07045912269787453 3.077454848427522 0.40327753558794127 0.021549383878286494 0.2697550262803422 9.350043329251372e-07 6.029186376548747 0.219470577972959 LPALGEAHVS(ph)PEVATADK ddPTM_A549_MK2206_60min_R1 4 LPALGEAHVSPEVATADK 18 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LPALGEAHVS(1)PEVATADK;LPALGEAHVS(0.999)PEVAT(0.001)ADK;LPALGEAHVS(1)PEVATADK;LPALGEAHVS(1)PEVATADK 122.19 7.0827e-11 37546100.0 3752.4400000000005 3765.45 3782.19 3370.75 4189.76 3719.06 3427.63 3616.62 4704.76 5073.37 4604.8 True False 4385.760133650162 3957.0953214626734 4318.561414364802 4196.583901318719 3573.45185414151 4112.608460687771 4050.3860030386368 4129.286960434234 3639.1393719578978 3927.2921933915104 3461.301073985306 1.2670842668420184 1.1432392724237983 1.247669972087246 1.2124296071381089 1.0324013363064874 1.1881683715980698 1.1701917621326896 1.1929869353086398 1.0513790318066236 1.1346288893816645 1.0 11.757098721413682 -8.856553058072233 3.4953700287905183 1.0214146325955016 1.1788873597041853 0.3464860077546327 0.06771775051614558 0.11720931524169806 2.6860938195127475 0.010510553100302071 0.011115644189308884 1.3913837980915522e-09 8.856553058072233 0.15747272710868376 LPALGEAHVS(ph)PEVATADK ddPTM_A549_PD325901_60min_R1 2 LPALGEAHVSPEVATADK 18 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LPALGEAHVS(1)PEVATADK;LPALGEAHVS(1)PEVATADK 134.87 2.8335999999999997e-13 53792000.0 4489.0 3627.9 3854.6 3262.2 4950.6 3504.2 3865.3 3594.3 3854.4 4167.0 4368.2 True False 4944.719975372858 3933.635865116158 4116.196335592787 3463.698685006257 4602.886934642837 3475.6629570138075 4012.3961066733177 3522.608866826197 3692.412972037058 3903.8949088553286 3830.9390923012634 1.2907331221500944 1.026807205841846 1.0744614405028738 0.9041382808635563 1.2015035540222754 0.9072613459187001 1.0473661966426755 0.9195157589180435 0.9638401663595774 1.0190438466381986 1.0 11.90348237334911 -2.060825147330518 0.9619845397242919 0.9879073341399572 199.99185412904535 0.49082611749847926 0.08280765834753256 595.6553869686516 1.064906570642921 0.010769122175925596 260822.9158002482 0.008693103546196965 2.060825147330518 199.0039467949054 LPAPTRT(ph)PATAPVPAR ddPTM_A549_PD325901_60min_R1 1 LPAPTRTPATAPVPAR 16 1 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 LPAPT(0.073)RT(0.907)PAT(0.02)APVPAR 51.397 0.0076533 19580000.0 4004.5 3595.8 4208.7 4388.4 4681.5 4122.2 4426.4 4912.1 4470.2 5480.3 5263.7 True False 4411.033892042908 3898.830685461197 4494.327690969065 4659.461501220479 4352.6875902982365 4088.6301699110513 4594.849074219018 4814.124312032098 4282.333039539242 5134.272922726151 4616.298269343477 0.9555348538321893 0.8445794569543018 0.9735782717541432 1.009350182626553 0.9428956571554613 0.8856945395108817 0.9953535941845653 1.0428538259761875 0.9276551881358978 1.1122056295240947 1.0 12.172520727406463 -3.211991532566085 0.007512740615883149 1.832640870545116 5.7374368792182795e-06 0.1725287837921916 0.06383720267100867 24856.960307403402 17.171459044522738 1906.9357039562292 2298.648071070908 0.0006137739717913531 3.211991532566085 -1.832635133108237 LPAS(ph)GPR ddPTM_A549_MK2206_60min_R1 2 LPASGPR 7 0 E7ETG2;Q76MJ5 E7ETG2 ERN2 Serine/threonine-protein kinase/endoribonuclease IRE2;Serine/threonine-protein kinase;Endoribonuclease 1 LPAS(1)GPR;LPAS(1)GPR 73.248 0.019153 153393000.0 4251.7 4771.5 4307.5 3381.3 5896.4 4484.5 4393.5 3950.7 6280.5 6422.6 6872.1 True False 4969.283015915085 5014.348969275692 4918.368271392069 4209.7186517923255 5029.047370913845 4959.0468134298235 5191.742079614845 4510.723823511324 4857.976777897615 4971.730199310577 5165.567909688677 0.9620012944935958 0.970725592411755 0.9521447316890455 0.8149575662138648 0.9735710494641314 0.9600196725956314 1.0050670459441788 0.8732290238699388 0.9404535692553502 0.9624750436414681 1.0 12.33471125436254 -10.49063683093331 0.8278501247539244 0.9999544951908934 0.938839745642659 0.07452849468159306 0.0510946554460818 0.888323418388695 1.101590093368805 0.032433075902288964 0.009474657403517887 3.2311950069794564e-11 10.49063683093331 -0.06111474954823437 LPCPAEGEAELELRVS(ph)EDEEKLPAS(ph)PK ddPTM_A549_PD325901_60min_R1 1 LPCPAEGEAELELRVSEDEEKLPASPK 27 2 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 2 LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK 69.48899999999999 6.8632e-05 4046200.0 1589.5 2347.1 2199.9 1901.5 2331.3 2289.1 1878.7 2119.1 1727.0 2291.1 2175.1 True False 1750.8648698719458 2544.8983541481657 2349.1984430733605 2018.9513363801725 2167.5575305483885 2270.458328548686 1950.194956564087 2076.8328880982094 1654.4201958042754 2146.439554998427 1907.5764890949329 0.9178477926736556 1.334100293590647 1.2315094343545612 1.058385521063998 1.1362886589029024 1.1902318683042303 1.0223416820834141 1.088728499208743 0.8672890472608153 1.1252180802547136 1.0 10.897525191381407 -8.262453750646152 1.5920952906104706 0.9396646938259017 1.1508423082409531 0.1164492624010588 0.12220477575771196 0.26303777859894056 1.2981590649339154 0.019243557846231534 0.024911297708760122 5.464447393627831e-09 8.262453750646152 0.21117761441505145 LPCPAEGEAELELRVS(ph)EDEEKLPASPK ddPTM_A549_PD325901_60min_R1 2 LPCPAEGEAELELRVSEDEEKLPASPK 27 2 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LPCPAEGEAELELRVS(1)EDEEKLPASPK;LPCPAEGEAELELRVS(1)EDEEKLPASPK 101.58 5.8844e-13 15984900.0 5424.1 5668.5 5603.299999999999 5064.299999999999 4633.6 4598.4 5564.200000000001 5188.2 2972.5 5284.1 4816.5 True False 5974.750638988624 6146.204388602484 5983.573633380132 5377.1103091402065 4308.151921052208 4560.952154994661 5775.948675847073 5084.717280935834 2847.5761621471966 4950.461024209852 4224.101034309109 1.4144431183014659 1.4550325237681614 1.4165318454223008 1.2729596819456006 1.019897934746451 1.0797450434896254 1.3673793853256597 1.2037395033017924 0.6741259593505305 1.1719561118451198 1.0 12.044428626923201 -7.349518346083624 0.5298137049202322 0.8586240617567938 1.4626524798897906 0.30131876838264515 0.18760061849610962 0.5798179596815259 0.3074743324379129 0.04959438449333221 0.14795692819206124 4.471792610090059e-08 7.349518346083624 0.6040284181329968 LPDAYER ddPTM_A549_MK2206_60min_R1 2 LPDAYER 7 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 92.47 0.033992 24168000.0 7752.2 8072.9 6997.6 6639.3 9817.8 8358.0 6900.7 7879.8 11613.0 10982.9 10838.3 False True 9060.581836906866 8483.776127856172 7989.964902122616 8265.928798049501 8373.614625561015 9242.43801240862 8154.467865892386 8996.785780875423 8982.674042150305 8501.855262044675 8146.850988137365 1.1121575502117302 1.041356487335954 0.9807427328371182 1.0146164217420357 1.0278345139433434 1.1344798162954668 1.00093494747432 1.1043267876110228 1.1025946166475835 1.0435756434509766 1.0 12.992026805146574 LPDAYER ddPTM_A549_PD325901_60min_R1 2 LPDAYER 7 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 111.01 0.022803999999999998 45072000.0 5093.1 5697.4 4433.6 5390.8 5798.1 6152.1 5645.2 5402.8 5561.6 6087.1 6251.4 False True 5610.147762657946 6177.53989302704 4734.49075740263 5723.777472604909 5390.8614583591125 6101.999337322253 5860.031175171974 5295.036915585391 5327.865292984981 5702.759467169013 5482.5174308896385 1.0232795122636933 1.12677067987445 0.8635614600562014 1.0440053396558233 0.9832821375060082 1.1129922365485472 1.0688577371693055 0.9658039362997839 0.9717917653971668 1.0401716983221039 1.0 12.420622778413316 LPDDQIPK ddPTM_A549_PD325901_60min_R1 1 LPDDQIPK 8 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 83.265 0.0093689 2326400.0 3193.6 3298.9 3586.7 3782.2 4406.5 3524.4 3246.5 3392.9 3525.4 4317.9 4690.4 False True 3517.8119209959395 3576.9098804905566 3830.115030579216 4015.817904000569 4097.002641599736 3495.6984549110966 3370.047334052965 3325.22594782144 3377.239697908738 4045.267057102578 4113.510534895348 0.8551848575940103 0.8695516518426898 0.931106167855398 0.9762507886959223 0.9959869087108022 0.8498090439435402 0.8192630857425779 0.8083669458515285 0.8210115591680764 0.9834099178271567 1.0 12.006154422985386 -7.303511274530175 24.91381256951212 0.8924615783469302 0.9256196232345911 0.0791257568010556 0.07060790481675984 1612.4932981726695 954870.3032766638 0.013336975853178418 0.021320861218229726 4.971514672246786e-08 7.303511274530175 0.03315804488766094 LPDGYEFK ddPTM_A549_MK2206_60min_R1 1 LPDGYEFK 8 0 P09382 P09382 LGALS1 Galectin-1 0 68.22399999999999 0.021159999999999998 2973500.0 3051.3 3250.9 3524.6 4050.7 4323.0 3254.9 3150.6 2950.2 4961.4 4894.5 4653.0 False True 3566.2848428773655 3416.3569242834224 4024.441279013 5043.12168184283 3687.0924266434736 3599.331357572243 3723.0232379730387 3368.399884608577 3837.650821727763 3788.8290506221197 3497.5316837329765 1.0196576229642635 0.9767908437178431 1.1506518433358819 1.4419087910764024 1.0541984347967865 1.0291061477191863 1.0644716258865712 0.9630791624490518 1.0972454773109508 1.083286555556871 1.0 11.772121411317992 -6.9661700497768235 24.999786672910318 1.0406246834888833 1.14941097740806 0.16399324043236263 0.1150419409817354 271.72451264291095 200799.0672074479 0.017091333714622008 0.032299485117690145 1.081010594309767e-07 6.9661700497768235 0.10878629391917682 LPDGYEFK ddPTM_A549_PD325901_60min_R1 1 LPDGYEFK 8 0 P09382 P09382 LGALS1 Galectin-1 0 89.355 0.007374800000000001 5457900.0 4738.7 4590.6 5118.7 4831.5 7319.8 5768.5 5088.3 5498.6 6284.6 5858.6 5418.0 False True 5219.769335553434 4977.465972712104 5466.085763243604 5129.930781867365 6805.682499939127 5721.523248540079 5281.938040924596 5388.92610943175 6020.480117285202 5488.686996165066 4751.620347531763 1.0985240725860708 1.0475302336176031 1.1503624792083758 1.079617142504265 1.4322866732133492 1.2041204536705323 1.1116077579026924 1.1341238809685281 1.267037279275174 1.15511901093196 1.0 12.214203854678289 -3.509468552419149 6.733022710368939 1.1432476136640841 0.8426174536636918 0.0 0.11264568906366342 0.0 0.0 0.01698593459498042 0.0 0.00030940793518874983 3.509468552419149 -0.30063016000039233 LPDLS(ph)PVENK ddPTM_A549_MK2206_60min_R1 2 LPDLSPVENK 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPDLS(1)PVENK;LPDLS(1)PVENK 146.16 3.858e-08 32648000.0 8219.1 8522.0 8884.099999999999 7565.8 11142.5 8654.8 8375.9 9648.099999999999 11080.3 11450.6 10816.900000000001 True False 9606.283142297822 8955.733399594983 10143.998969210515 9419.421339641667 9503.45301038049 9570.645191408721 9897.692610594284 11015.747721067042 8570.629741603203 8863.901507212917 8130.765198747315 1.1814734416113548 1.1014625537304619 1.2476069252096191 1.1584913731235151 1.1688263992477192 1.1770903423558763 1.217313791341459 1.3548230027309371 1.0540987880112018 1.0901681810438402 1.0 12.989175417588378 -8.961895667335096 17.678750560509556 1.023864327648477 1.196908262585554 0.5267283983265035 0.06388543005907305 3.4593700846623627 1604.9598988319922 0.010663631178965897 0.011299206019545685 1.091702569939724e-09 8.961895667335096 0.17304393493707715 LPDLS(ph)PVENK ddPTM_A549_PD325901_60min_R1 2 LPDLSPVENK 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPDLS(1)PVENK;LPDLS(1)PVENK 187.78 3.2397000000000003e-14 111350000.0 29530.0 31864.0 32565.0 30017.0 40382.0 28639.0 29375.0 29372.0 32421.0 32370.0 34347.0 True False 32527.863861162976 34549.29110671771 34775.05672925311 31871.081916446794 37545.70763033714 28405.77347923019 30492.88169961677 28786.152418111753 31058.458117064514 30326.152675701247 30122.5367435721 1.079851412849688 1.146958219383374 1.1544531267498188 1.0580477397292185 1.2464324618459994 0.9430073476561281 1.0122946138035238 0.9556350669654169 1.03107046997601 1.006759587808374 1.0 14.878555649999726 -7.275592441260461 24.999630945792987 1.0054168593074273 1.1342604480056462 0.6612822805676524 0.05137208580326742 379.167936549354 669751.8753121407 0.007100451442355745 0.011384563842299257 5.3016073385539774e-08 7.275592441260461 0.12884358869821888 LPDLS(ph)PVENKEHKPGPIGK ddPTM_A549_MK2206_60min_R1 1 LPDLSPVENKEHKPGPIGK 19 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPDLS(1)PVENKEHKPGPIGK 105.16 4.1999e-10 12914000.0 1461.1 1616.4 1958.8 1846.5 2387.1 1407.8 1523.4 1737.5 2531.2 2682.8 2638.5 True False 1707.6979595346638 1698.6678557973858 2236.5872942548563 2298.892582892535 2035.9607521722482 1556.7724615779907 1800.1820607910008 1983.7959458705857 1957.8872414958112 2076.753616714481 1983.287631104548 0.8610440224364226 0.8564909240377556 1.127717058876245 1.1591322140259694 1.0265584881595642 0.7849453791586352 0.9076757362664686 1.0002562990652821 0.9871927857511064 1.0471267929795331 1.0 10.953678207753862 -7.057782067908136 0.0045412489627140555 1.9466366470843022 5.761898421956918e-06 0.028218803191197184 0.10883659368079505 70231.04841334357 95.31682037357703 20096.65366903382 20761.66127474962 8.754229585569485e-08 7.057782067908136 -1.9466308851858802 LPDLS(ph)PVENKEHKPGPIGK ddPTM_A549_PD325901_60min_R1 2 LPDLSPVENKEHKPGPIGK 19 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPDLS(1)PVENKEHKPGPIGK;LPDLS(1)PVENKEHKPGPIGK 114.84 1.7424000000000002e-14 44112000.0 2520.5 2497.8999999999996 2939.2 2582.82 3157.7 2787.0 2905.0 3540.8999999999996 3566.0 3017.6000000000004 3056.3 True False 2776.37930450597 2708.4067993808108 3138.6717868454093 2742.354925390184 2935.9140454736175 2764.3035960269053 3015.551364676995 3470.2739717176864 3416.1334210990403 2827.068221013162 2680.394475481974 1.0358099637579414 1.0104508213828487 1.1709738307384887 1.02311616833827 1.095329091418791 1.0313047655158456 1.1250401357937267 1.2946877795268104 1.2744890546324417 1.0547209550209262 1.0 11.388229623383026 -7.919383846256169 6.668274825383961 1.148542555592607 1.0641954826773958 0.20099005624366229 0.08891176544399781 0.3977733216505687 27.02052116431186 0.018320953301116973 0.02537748252480643 1.2039713535428265e-08 7.919383846256169 -0.08434707291521115 LPDMSVKT(ph)PK ddPTM_A549_MK2206_60min_R1 1 LPDMSVKTPK 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPDMS(0.057)VKT(0.943)PK 53.251999999999995 0.0085344 4304500.0 1961.9 1792.6 2273.3 2594.5 3092.3 2049.5 2116.5 2021.0 2746.7 2772.7 3326.8 True False 2293.0207561501998 1883.8356831863368 2595.6881233559134 3230.1526164715315 2637.426766345039 2266.376729652006 2501.0406535802495 2307.4829390529235 2124.5768355785963 2146.345144276217 2500.6637449909454 0.9169648501296213 0.7533342645366973 1.0379996625117274 1.2917180980217025 1.0546906882734803 0.9063100683535572 1.000150723418956 0.92274818782614 0.8496051657622161 0.8583101780779362 1.0 11.288095361353989 -7.26849012138553 24.140663184134166 0.9313212251926128 1.0137319288866906 0.1036884798498261 0.12752009669548067 764.5221187736333 2617605.941478983 0.02082227160676268 0.033729745225448755 5.3890210328995745e-08 7.26849012138553 0.08241070369407777 LPDMSVKT(ph)PK ddPTM_A549_PD325901_60min_R1 2 LPDMSVKTPK 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPDMSVKT(1)PK;LPDMS(0.117)VKT(0.883)PK 73.46600000000001 0.0006669 15013200.0 6691.700000000001 6581.8 7237.7 7483.900000000001 8172.8 8257.9 7040.9 8144.700000000001 8356.2 6421.1 7434.5 True False 7371.036457830824 7136.471384829105 7728.893845825746 7946.163505829905 7598.770722629375 8190.650400298022 7308.845302428315 7982.2475691064565 8005.017973468257 6015.670650168216 6520.103631178461 1.130509095374388 1.094533428993864 1.1853943254624015 1.2187173632995913 1.165437108436872 1.2562147572518907 1.120970726213334 1.224251640869046 1.2277439786676225 0.9226342080518323 1.0 12.670679179639773 -10.820600142556883 1.0245902036297807 0.9981402011429906 1.1830994917868047 0.6913775560396902 0.05468103118329318 0.2664443261405428 0.48845053985498477 0.036124848190806996 0.0085883807046792 1.5114711339455038e-11 10.820600142556883 0.1849592906438141 LPDNFRPPGEDFRS(ph)PPDDFR ddPTM_A549_PD325901_60min_R1 1 LPDNFRPPGEDFRSPPDDFR 20 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 LPDNFRPPGEDFRS(1)PPDDFR 49.593 0.0030912 2322800.0 225.05 254.36 192.07 331.2 393.91 286.12 310.16 348.51 343.42 268.63 194.54 True False 247.89691032694643 275.7958098764977 205.10502521073695 351.6574717902249 366.2431205157276 283.78993358278353 321.9633085260644 341.55869464919397 328.98725167521957 251.66865595531743 170.61281329066622 1.4529794424326992 1.6165011557873756 1.2021665973077165 2.0611433866407216 2.146633148190188 1.6633565094510339 1.8870992296314133 2.0019521867170322 1.9282681372514334 1.475086490289329 1.0 7.414582189166759 -10.755390395650664 0.9859895158069062 0.9960736128093296 1.7832957448674507 0.2824904817329066 0.29779629313625966 0.3575352996907123 0.6125220499441888 0.19783598112767836 0.04949474049800098 1.756344092697506e-11 10.755390395650664 0.7872221320581211 LPDS(ph)DDDEDEETAIQR ddPTM_A549_MK2206_60min_R1 2 LPDSDDDEDEETAIQR 16 0 H3BRF9;Q96K21-2;Q96K21;H3BRM1;Q96K21-4;Q96K21-3 H3BRF9;Q96K21-3 ZFYVE19 Abscission/NoCut checkpoint regulator 1 LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR 384.32 8.620299999999995e-294 154748000.0 11920.8 13104.2 11852.7 12050.4 16158.4 11390.8 12427.7 12248.4 19261.7 17147.300000000003 17189.3 True False 13932.739604421879 13771.147807436353 13533.591087714172 15002.748540963019 13781.520764903042 12596.166895398901 14685.65222324558 13984.648209151826 14898.955704614349 13273.71302068295 12920.722409454389 1.0783251247799406 1.065818719033828 1.0474330040409607 1.1611385234919345 1.0666215346301988 0.9748810086796692 1.1365968370700197 1.0823425940115343 1.1531054713869902 1.0273197271826124 1.0 13.65739911424082 -11.102239982191179 1.4601560165760663 1.000297756945854 1.0925215096911223 0.21305651354947086 0.05083790071154468 0.4247682377732606 1.627635981799477 0.03756602146509919 0.008300228570204798 7.902418359575871e-12 11.102239982191179 0.09222375274526828 LPDS(ph)DDDEDEETAIQR ddPTM_A549_PD325901_60min_R1 3 LPDSDDDEDEETAIQR 16 0 H3BRF9;Q96K21-2;Q96K21;H3BRM1;Q96K21-4;Q96K21-3 H3BRF9;Q96K21-3 ZFYVE19 Abscission/NoCut checkpoint regulator 1 LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR 391.43 3.361399999999998e-294 276584230.0 8858.67 9268.15 9367.470000000001 10018.18 11608.060000000001 8797.91 10074.369999999999 9598.98 10794.2 10573.400000000001 10632.65 True False 9757.995656991823 10049.209527075258 10003.202845373158 10636.980225662432 10792.749911233013 8726.262737897761 10457.755663256796 9407.520813645868 10340.557311841636 9905.793719532274 9324.901455921672 1.046444909162565 1.0776746086355284 1.0727408640893183 1.1407069850488918 1.157411685501427 0.9358021400168521 1.121486989722097 1.0088600783734534 1.1089186690841633 1.062294734840518 1.0 13.186872763938347 LPDS(ph)PALAK ddPTM_A549_MK2206_60min_R1 3 LPDSPALAK 9 0 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 LPDS(1)PALAK;LPDS(1)PALAK;LPDS(1)PALAK 130.01 4.9873e-05 82675900.0 7420.3 8629.4 7942.9 7252.5 10537.099999999999 10658.0 9520.3 10958.2 13658.0 10947.5 13325.2 True False 8672.665231082792 9068.599600852489 9069.322656492188 9029.362825577093 8987.10654841196 11785.822485792187 11250.015277240753 12511.55840808003 10564.484807344259 8474.452146631042 10016.185083189057 0.8658651132194832 0.905394571439482 0.9054667601653985 0.9014772341549254 0.8972584346005867 1.1766777857942392 1.123183645649932 1.2491341068646138 1.0547413730478539 0.8460758338875322 1.0 13.290045505891479 -7.229750996347104 23.306766817192923 1.0625968507114154 0.8965957457442493 0.4576608181355336 0.09698526180271685 200.7754150818891 147669.76520230118 0.012557131464861222 0.021747724980205725 5.89181366906085e-08 7.229750996347104 -0.16600110496716614 LPDS(ph)PALAK ddPTM_A549_PD325901_60min_R1 2 LPDSPALAK 9 0 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 LPDS(1)PALAK;LPDS(1)PALAK 126.03 6.650699999999999e-05 132536000.0 14955.5 14416.199999999999 14080.5 13351.3 15795.0 11657.5 14431.0 13423.2 14119.7 13176.8 14242.7 True False 16473.771350342802 15631.103767658296 15036.087402924877 14175.979477997678 14685.613689791859 11562.56518503181 14980.179601946205 13155.463745703313 13526.298111579405 12344.814599233237 12490.938191914121 1.3188578069345445 1.2513954938770675 1.2037596513493543 1.1349010987160557 1.1757014136294772 0.9256762788656433 1.1992837825139082 1.0532006118018713 1.082888883425547 0.9883016319162098 1.0 13.60859422110614 -2.0000000000301417 0.24781891987348792 1.0206216606958354 2.9466993118601974 0.6617764650524924 0.0676321976040544 18.982228509463358 0.2299234177293451 0.03002860472866866 15.440395451821251 0.009999999999305962 2.0000000000301417 1.926077651164362 LPDSSNKIEEDRCS(ph)NSADITGPSFIR ddPTM_A549_MK2206_60min_R1 2 LPDSSNKIEEDRCSNSADITGPSFIR 26 2 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 LPDSSNKIEEDRCS(0.964)NS(0.036)ADITGPSFIR;LPDSSNKIEEDRCS(0.999)NS(0.001)ADITGPSFIR 173.33 8.947299999999999e-49 23061000.0 4070.3999999999996 4990.6 5113.0 4643.6 6900.1 5093.1 4314.4 4549.9 6732.4 7389.5 7578.299999999999 True False 4757.384008274515 5244.600223423927 5838.100283604798 5781.282208459123 5885.104430507198 5632.048461473838 5098.270633501828 5194.86225848436 5207.522149433628 5720.206817769365 5696.398959560206 0.835156393020936 0.920686956910202 1.0248755968552337 1.014901212064239 1.033127151431395 0.9887033021136328 0.8949988702854905 0.9119554819393184 0.9141779194896276 1.0041794576500305 1.0 12.475834476756894 -6.336817738953069 0.0035394842596225633 1.8958094618812573 5.2688217653980635e-05 0.05490283981994237 0.06055825459288586 125153.84108593216 93.82980871862776 24663.487874652958 25596.81289382008 4.604497707168908e-07 6.336817738953069 -1.8957567736636034 LPDSSNKIEEDRCS(ph)NSADITGPSFIR ddPTM_A549_PD325901_60min_R1 3 LPDSSNKIEEDRCSNSADITGPSFIR 26 2 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 LPDS(0.002)S(0.002)NKIEEDRCS(0.962)NS(0.029)ADIT(0.004)GPS(0.001)FIR;LPDSSNKIEEDRCS(0.999)NS(0.001)ADITGPSFIR;LPDSSNKIEEDRCS(0.998)NS(0.002)ADITGPSFIR 189.31 3.8719e-58 35720500.0 9324.6 9044.6 9791.3 9850.8 11280.0 9670.0 10674.8 11247.6 10282.0 10289.599999999999 11914.400000000001 True False 10271.226527592295 9806.820184026465 10455.796497869986 10459.261543209994 10487.731713887446 9591.250726078279 11081.035355474696 11023.2577944285 9849.883296618162 9639.912899965882 10449.004331604372 0.9829861488836439 0.9385411157658785 1.0006500299980803 1.00098164488023 1.0037063227321992 0.9179104938322491 1.0604872008674227 1.0549577208124246 0.9426623804553232 0.9225676049160696 1.0 13.351077856373038 LPEASQS(ph)PLVLK ddPTM_A549_MK2206_60min_R1 2 LPEASQSPLVLK 12 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 LPEASQS(1)PLVLK;LPEAS(0.18)QS(0.82)PLVLK 109.84 9.1819e-05 18668100.0 2589.6000000000004 3026.7 3101.2 3066.3999999999996 4136.3 2854.4 2764.3 3169.6 4484.4 4162.5 4447.4 True False 3026.6611703586086 3180.7461019190464 3540.996792394915 3817.6681376559277 3527.855749323479 3156.4507134026285 3266.5375283212284 3618.900506492898 3468.6905601152885 3222.1883590181974 3342.9878380043106 0.9053760638762772 0.9514680447709559 1.0592311321445942 1.1419928287669125 1.0553002045707502 0.944200477644262 0.9771311433401082 1.0825347509051366 1.0376019082935162 0.9638648164935509 1.0 11.706922391013519 -5.591642147680728 4.624696114703178 1.0275171015282534 0.9148436499325904 0.34925339011323686 0.054345994107240114 0.1547863147935314 6.221361290366356 0.007405770205232975 0.0323622291723647 2.5606949931787242e-06 5.591642147680728 -0.112673451595663 LPEASQS(ph)PLVLK ddPTM_A549_PD325901_60min_R1 2 LPEASQSPLVLK 12 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 LPEAS(0.005)QS(0.995)PLVLK;LPEAS(0.005)QS(0.995)PLVLK 194.48 2.2616000000000002e-24 32810000.0 4911.8 5628.0 4970.1 5730.9 6409.4 5406.200000000001 5962.0 6402.299999999999 5466.299999999999 6642.0 6539.8 True False 5410.442320123954 6102.291311467721 5307.400873639213 6084.884677181768 5959.225855229625 5362.1736996199 6188.887172531584 6274.6011039928135 5236.570420570302 6222.622986469187 5735.446059207867 0.9433341826025647 1.063961067451922 0.925368457631738 1.0609261449530856 1.0390169820641055 0.9349183383934535 1.0790594329791923 1.0940040302391774 0.9130188596514384 1.0849414190687385 1.0 12.4856899770727 -8.781577039428187 24.996722828030123 0.958925581639962 1.0175005709115459 0.0 0.07047432769254691 322.85186365388114 400752.0725703568 0.010566438171135978 0.011255651915974446 1.6535714319832384e-09 8.781577039428187 0.05857498927158389 LPEEVAT(ph)PTTDEEKDSLIAIDR ddPTM_A549_MK2206_60min_R1 2 LPEEVATPTTDEEKDSLIAIDR 22 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 LPEEVAT(0.752)PT(0.183)T(0.063)DEEKDS(0.001)LIAIDR;LPEEVAT(0.945)PT(0.027)T(0.027)DEEKDSLIAIDR 67.33 0.00032491 7130100.0 3048.3 3085.7 2682.4 2872.2 3974.8 2870.2 3142.8 3150.9 4436.5 4013.7 4234.2 True False 3562.778516220324 3242.7489499096737 3062.80465494651 3575.8891289379553 3390.112185385723 3173.922658915437 3713.806078937871 3597.549724226547 3431.6398336347065 3107.0023823642878 3182.7312820249667 1.1194091490983673 1.0188572840640575 0.9623195876586366 1.1235284452487133 1.0651581566222623 0.9972323698330179 1.1668613369630803 1.1303341078602331 1.078205958830233 0.9762063168548437 1.0 11.636049640047688 -5.242544174433426 23.085682038704174 1.0507189873080485 1.1194093260934508 0.08260260274195297 0.06460217322080139 2924.6393312042483 3573086.900352488 0.008739464404951738 0.37369249164526924 5.720787624773352e-06 5.242544174433426 0.06869033878540232 LPEEVAT(ph)PTTDEEKDSLIAIDR ddPTM_A549_PD325901_60min_R1 2 LPEEVATPTTDEEKDSLIAIDR 22 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 LPEEVAT(0.939)PT(0.049)T(0.011)DEEKDSLIAIDR;LPEEVAT(0.914)PT(0.071)T(0.015)DEEKDSLIAIDR 74.28699999999999 8.1791e-05 8913700.0 3104.9 3315.3999999999996 3481.2 3197.8 3147.0 3561.4 2960.7 3271.5 2861.8 2857.0 3764.7 True False 3420.107162293426 3594.8003933973105 3717.4551661561813 3395.3208432692663 2925.9655765606212 3532.397139178405 3073.3710586572033 3206.247366057898 2741.528498177576 2676.608532421328 3301.665766399563 1.0358732240856174 1.0887838587360732 1.125933219524529 1.0283660077960688 0.886208896835539 1.0698833222693078 0.9308546885436824 0.9710999213449404 0.8303470708869445 0.8106842793297475 1.0 11.68897836567526 -6.78105129556518 0.9125174740367987 0.92560222620423 1.0907957018205574 0.4477757287233586 0.07411739575488781 0.47707755716315126 0.7419566710605279 0.013118154139621009 0.045950633533795436 1.6555744080481226e-07 6.78105129556518 0.16519347561632736 LPEEVATPT(ph)TDEEKDSLIAIDR ddPTM_A549_MK2206_60min_R1 2 LPEEVATPTTDEEKDSLIAIDR 22 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 LPEEVAT(0.065)PT(0.467)T(0.467)DEEKDS(0.002)LIAIDR;LPEEVAT(0.093)PT(0.453)T(0.453)DEEKDSLIAIDR 55.206 0.0024436999999999996 5245500.0 1751.1599999999999 1784.7800000000002 2096.7 1926.96 2799.5 2394.74 2158.5 2127.87 2773.0 2935.6 3064.2 True False 2046.712996248526 1875.617678588258 2394.0435878416156 2399.0652865045213 2387.6972584752243 2648.1497973002415 2550.6715099234434 2429.502088828571 2144.9199275710657 2272.4459211372555 2303.2745723822463 0.8886100774913857 0.814326568390121 1.039408682120555 1.0415889252939565 1.0366533313506174 1.1497325716409466 1.1074109619876182 1.0548035036551326 0.9312480384623026 0.9866152947570184 1.0 11.169470689106955 -5.762574341001746 24.999488541780185 1.0073574687717743 0.851468295631785 0.5208934310984612 0.0636937822418821 22.244758772396107 490040.5371696197 0.010940792385847687 0.037061487083715365 1.7275302426466948e-06 5.762574341001746 -0.1558891731399893 LPEEVATPT(ph)TDEEKDSLIAIDR ddPTM_A549_PD325901_60min_R1 1 LPEEVATPTTDEEKDSLIAIDR 22 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 LPEEVAT(0.01)PT(0.495)T(0.495)DEEKDS(0.001)LIAIDR 57.738 0.0014590999999999999 4175200.0 1001.8 1109.9 1230.9 1340.7 1544.0 1064.3 1396.4 1395.1 1325.3 1335.8 1364.0 True False 1103.5019985138188 1203.435168194389 1314.436276003 1423.5119940493794 1435.5547665108345 1055.6326936675403 1449.5407661394 1367.2736360652218 1269.6022498548964 1251.4573600309452 1196.2366471084035 0.9224780073250999 1.0060176396563223 1.0988095701467715 1.1899919614487284 1.2000591772379834 0.8824614228457743 1.2117508434834314 1.1429792251978372 1.0613303420555085 1.0461620307787958 1.0 10.224287105500448 -9.874836529487718 1.0914477644973313 1.0096890545936983 1.0837186719990022 0.03707055626330413 0.10424014806137685 0.878067121830374 2.1259025494560686 0.032762260681577 0.019705088667562043 1.3340234704631298e-10 9.874836529487718 0.0740296174053039 LPEEVATPTT(ph)DEEKDSLIAIDR ddPTM_A549_PD325901_60min_R1 1 LPEEVATPTTDEEKDSLIAIDR 22 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 LPEEVATPT(0.167)T(0.833)DEEKDSLIAIDR 108.57 1.37e-10 3707600.0 1152.9 1267.6 1175.2 1148.1 1542.5 1193.6 1277.4 1353.6 1482.2 1369.6 1557.5 True False 1269.9415592798782 1374.4251006425868 1254.9561390516892 1219.015529475716 1434.1601213361168 1183.8797173368187 1326.0121560201007 1326.601386121343 1419.9082884893435 1283.123222262602 1365.9373738059658 0.9297216575467069 1.0062138477205373 0.9187508615822956 0.8924388137057297 1.049945736047956 0.8667159564117698 0.9707708284790394 0.9712022026492918 1.039511997927838 0.9393719264649627 1.0 10.415675624387639 -8.535336252670145 3.1020703213408596 1.0185516103100445 0.9480384380329078 0.06481975616452529 0.05427117122645098 0.2236785811164638 4.437699624912481 0.007937397826466498 0.00926958827594337 2.9151690692302627e-09 8.535336252670145 -0.07051317227713672 LPEGDLGK ddPTM_A549_MK2206_60min_R1 1 LPEGDLGK 8 0 I3L397;I3L504;P63241;P63241-2;Q6IS14 I3L397 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like 0 64.836 0.025575999999999998 2123400.0 1628.5 1608.6 1255.6 1639.3 1889.8 1470.3 1356.7 1674.5 2404.8 2133.0 2457.1 False True 1903.3509869976049 1690.4708691138799 1433.6629603157007 2040.9285735909746 1611.8129234029213 1625.8861700938494 1603.1948285907513 1911.8655029411786 1860.1166396764877 1651.1538185671639 1846.9342574898574 1.030546149262737 0.9152848090063451 0.7762393027806913 1.1050358535039424 0.8726964248275485 0.8803162123938123 0.8680302626308047 1.0351562299459258 1.007137439859146 0.8939970721054381 1.0 10.850916798474918 -8.270316842625855 24.930757695995144 1.005848565637276 0.919000755172529 0.0855162036315047 0.08897916822719877 718.7667497364012 2018523.4582249902 0.012697798307690465 0.015464779282490258 5.366401438902592e-09 8.270316842625855 -0.08684781046474699 LPEGDLGKEIEQK ddPTM_A549_PD325901_60min_R1 2 LPEGDLGKEIEQK 13 1 I3L397;I3L504;P63241;P63241-2;Q6IS14 I3L397 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like 0 ; 88.087 0.00019414 5563400.0 4194.5 3824.6 3886.3 4370.8 4984.700000000001 4162.3 4468.700000000001 4236.700000000001 4775.8 4045.3 5039.1 False True 4620.3225521723025 4146.912464434868 4150.047688220371 4640.774389192981 4634.59186828145 4128.403608806169 4638.75882386647 4152.195694873146 4575.089734291871 3789.879067624781 4419.322645486768 1.0454820620283982 0.9383592910261713 0.9390687263937622 1.0501098836792038 1.048710908902414 0.9341711253018152 1.0496538035311365 0.9395547752354254 1.0352468242987825 0.857570123669335 1.0 12.109609547744217 -6.255957498793473 24.937724020624632 1.0120202666904068 0.9707089564380889 0.0 0.0658527780077345 641.2084909244949 2916920.3039043937 0.006049780407031664 0.015475763920130163 5.546799927528739e-07 6.255957498793473 -0.041311310252317934 LPEGPVDS(ph)EDDEEEDEEIDRTDPLQGR ddPTM_A549_MK2206_60min_R1 1 LPEGPVDSEDDEEEDEEIDRTDPLQGR 27 1 E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;Q8TEU7-6;D6RD23;D6RIH0;D6RB02 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 LPEGPVDS(0.995)EDDEEEDEEIDRT(0.005)DPLQGR 40.764 0.02416 7040800.0 748.96 1111.4 607.34 504.03 1262.0 860.95 916.76 745.0 1453.0 999.87 1110.8 True False 875.3661376860459 1167.9655128267846 693.4699445031364 627.5173726267661 1076.3614717612913 952.0551575476424 1083.3234252663497 850.6060314668123 1123.897819964212 773.9986725601262 834.9577034796024 1.0483957858440558 1.3988319503603661 0.8305449984031167 0.7515558812280556 1.2891209546012485 1.1402435759081544 1.297459045831553 1.0187414618992041 1.3460535968235046 0.9269914743400348 1.0 9.705559306492228 LPEGPVDS(ph)EDDEEEDEEIDRTDPLQGR ddPTM_A549_PD325901_60min_R1 2 LPEGPVDSEDDEEEDEEIDRTDPLQGR 27 1 E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;Q8TEU7-6;D6RD23;D6RIH0;D6RB02 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR;LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR 291.93 4.854799999999999e-171 182022000.0 3947.7000000000003 4314.3 4362.6 3950.5 4715.6 4352.2 3954.3999999999996 3995.6 4028.8 4567.9 4333.200000000001 True False 4348.4675978568575 4677.881202037167 4658.6722704449485 4194.51341276354 4384.392523936849 4316.757126167312 4104.8868559307075 3915.904623512437 3859.483546529396 4279.482014437309 3800.243870417987 1.1442601438571813 1.2309423714753993 1.2258877138673059 1.103748484515597 1.1537134650926 1.135915818395232 1.0801640620708937 1.0304350870729062 1.0155883880433423 1.1261072079478442 1.0 11.89187628725871 -7.710050064417914 0.6944909542135019 1.002139251651749 1.1952136007221168 0.5618005219061185 0.048980324725334354 0.1673041588649926 0.16290979816023968 0.006609446038467278 0.013099197034370923 1.9496198393417378e-08 7.710050064417914 0.1930743490703677 LPELDPRGS(ph)DEENLDSETSASTESLLEER ddPTM_A549_PD325901_60min_R1 2 LPELDPRGSDEENLDSETSASTESLLEER 29 1 Q13459-2;Q13459;M0R300;M0R0P8;M0R240;M0QXP0 Q13459-2 MYO9B Unconventional myosin-IXb 1 LPELDPRGS(1)DEENLDSETSASTESLLEER;LPELDPRGS(1)DEENLDSETSASTESLLEER 159.13 2.6374e-46 181257000.0 2704.0 2928.8 2457.5 2639.1000000000004 3327.9 2652.9 2391.3 2785.0 2248.7 2942.9 3432.2 True False 2978.5080894204075 3175.620254624496 2624.2807281479973 2802.1112131690293 3094.15978463174 2631.2956619661936 2482.30223006957 2729.450990209764 2154.1949590648946 2757.084791761543 3010.061158508403 0.9895174657834424 1.0550019044125116 0.8718363481519511 0.9309150431207781 1.0279391752176261 0.8741668435966591 0.8246683702930618 0.9067759246334742 0.715664847199443 0.9159564030678302 1.0 11.555577084663813 -7.36584529776593 6.9007141173084605 0.8627577366490208 0.9710873343998553 0.2881827803168717 0.07909451830098913 0.33965628794890196 19.625580305664947 0.016367082653039117 0.02622506996963088 4.30679997871072e-08 7.36584529776593 0.1083295977508345 LPEPSVLSEVTKPPPCLENS(ph)SPPSRIPEPESPAKPNVPTASTAPPADSR ddPTM_A549_MK2206_60min_R1 1 LPEPSVLSEVTKPPPCLENSSPPSRIPEPESPAKPNVPTASTAPPADSR 49 3 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 LPEPS(0.007)VLS(0.007)EVT(0.024)KPPPCLENS(0.453)S(0.453)PPS(0.029)RIPEPES(0.024)PAKPNVPT(0.001)AS(0.001)T(0.001)APPADSR 47.222 0.00076015 17027000.0 461.7 555.14 661.13 560.87 1062.5 771.56 859.59 589.99 911.68 941.5 1041.4 True False 539.6236725187556 583.3942548053454 754.888175337305 698.2831751784112 906.2076574852389 853.2059670799222 1015.7663762868161 673.6228892685967 705.1859356538006 728.8144960998521 782.791638822163 0.6893579922886082 0.7452739986890468 0.9643539070922585 0.8920421994147657 1.1576613910296427 1.0899528364453521 1.2976203703647133 0.8605391982497049 0.9008603320225382 0.9310453254156773 1.0 9.612484536063633 -5.722138040517993 2.165460783266786 0.9911562215984805 0.6801809978969974 0.44829096679270264 0.12462712837809145 0.2682589123407907 2.3189545224738746 0.018580515734060894 0.11194195546911138 1.8961031489608616e-06 5.722138040517993 -0.3109752237014831 LPEPSVLSEVTKPPPCLENS(ph)SPPSRIPEPESPAKPNVPTASTAPPADSR ddPTM_A549_PD325901_60min_R1 1 LPEPSVLSEVTKPPPCLENSSPPSRIPEPESPAKPNVPTASTAPPADSR 49 3 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 LPEPS(0.021)VLS(0.02)EVT(0.02)KPPPCLENS(0.45)S(0.45)PPS(0.02)RIPEPES(0.019)PAKPNVPTASTAPPADSR 55.081 0.00030157 28813000.0 618.33 444.47 841.71 259.7 524.13 654.75 1200.3 946.39 816.6 582.07 852.84 True False 681.1024064095122 481.9270467676007 898.8335022134082 275.74107917850665 487.3169169503395 649.417933081671 1245.9780733293628 927.5135090214071 782.2811418029943 545.3180008633125 747.9460865981897 0.9106303497185257 0.644333937168523 1.2017356843211588 0.36866437851507844 0.6515401653704153 0.8682683748441753 1.6658661575412788 1.240080703196037 1.0459057889599601 0.7290873107492669 1.0 9.546790471384094 -7.534584392100653 24.998805394273596 1.093877382190745 0.7532627251874016 0.28773079088038356 0.28424605469288833 228.61245130581568 488227.7871845403 0.040693815237088336 0.060384282656186235 2.9202202478915155e-08 7.534584392100653 -0.3406146570033435 LPGNRPT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 LPGNRPTSPK 10 1 Q07343-3 Q07343-3 PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 LPGNRPT(0.5)S(0.5)PK 51.726000000000006 0.0097413 20226000.0 4303.1 3473.2 3905.6 3538.4 5242.2 3921.5 3879.9 3568.6 5506.1 5355.3 4806.4 True False 5029.358079305734 3649.9710447633493 4459.472808067063 4405.30815884481 4471.079324300349 4336.470527118975 4584.82760776093 4074.4599783791487 4258.977141434926 4145.534010582618 3612.838230108355 1.3920795117236384 1.010278017528031 1.2343405721582268 1.2193483013250466 1.237553147838079 1.2002946854857979 1.269037614126283 1.1277726039388563 1.1788452375038094 1.1474452346177388 1.0 11.818916942187654 -10.500619535822757 0.4638821853434603 0.9622722413471684 1.2148208998760097 0.17949843795133102 0.0969460343822697 1.0327526413753538 0.32753607655165573 0.11848859786259014 0.021577971877814642 3.1577697798132896e-11 10.500619535822757 0.25254865852884134 LPGNRPT(ph)SPK ddPTM_A549_PD325901_60min_R1 2 LPGNRPTSPK 10 1 Q07343-3 Q07343-3 PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 LPGNRPT(0.5)S(0.5)PK;LPGNRPT(0.5)S(0.5)PK 69.03 0.0015064 43072000.0 6573.7 6115.0 6462.3 6617.4 7580.9 7399.200000000001 6668.1 6834.2 7058.3 7616.4 7936.2 True False 7241.0571846978355 6630.332510594366 6900.870538966756 7026.141768794187 7048.44373668523 7338.943368396941 6921.858194424325 6697.88651967382 6761.664196899434 7135.49920417704 6960.09771171679 1.0403671736544835 0.9526206075286429 0.9914904682084663 1.0094889554447226 1.0126932161914504 1.0544310830640198 0.9945058936129457 0.9623265070544113 0.9714898377815431 1.0252010100612488 1.0 12.764891844646971 -7.995201393346421 24.99382800004894 0.9840625937297237 1.0082710281578244 0.08977319264089112 0.028821410444285298 197.85884087496945 1030550.4218467502 0.004252576501514571 0.005864953761038915 1.0111104680053046e-08 7.995201393346421 0.024208434428100722 LPGNRPT(ph)SPKIS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LPGNRPTSPKISPR 14 2 Q07343-3 Q07343-3 PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4B 2 LPGNRPT(0.776)S(0.239)PKIS(0.985)PR;LPGNRPT(0.83)S(0.185)PKIS(0.985)PR 63.998000000000005 0.0026431 31937000.0 2809.05 2584.9 2828.35 2347.06 3724.3 3709.8 2955.3 3020.2 4832.5 4067.0 4577.6 True False 3283.1489653212275 2716.460368999419 3229.452559580213 2922.0898053635283 3176.460403550376 4102.368573634061 3492.2397559771853 3448.3225989745847 3737.9464659167625 3148.2618753458282 3440.855584667114 0.9541664520741159 0.7894723571382388 0.9385609131551642 0.8492334925024836 0.9231600470839533 1.192252471133846 1.0149335448831522 1.002170103953431 1.0863421535543436 0.9149648387961645 1.0 11.748551626996566 -7.0194174392291435 23.929623030743223 1.046294874613063 0.8809203801648835 0.4749187836608525 0.07584850001705018 219.94931596711004 271061.06289303006 0.009249483727500236 0.016190593842956503 9.562744685781833e-08 7.0194174392291435 -0.16537449444817942 LPGNRPTS(ph)PKIS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LPGNRPTSPKISPR 14 2 Q07343-3 Q07343-3 PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4B 2 LPGNRPT(0.492)S(0.61)PKIS(0.898)PR;LPGNRPT(0.218)S(0.81)PKIS(0.973)PR 57.93600000000001 0.0035125 34215000.0 3017.1 2744.0 3125.6 2724.05 3363.8999999999996 2939.1 3099.6000000000004 3049.47 3854.7000000000003 3243.2 3549.9 True False 3323.3937709283705 2975.2465100688387 3337.722011759669 2892.3083817335832 3127.631268824998 2915.1649440555 3217.5569741662016 2988.6459285870637 3692.7003640803364 3038.423798512025 3113.2848046701743 1.0674878719553753 0.9556615268881706 1.072090162375386 0.9290214558574568 1.0046081438271575 0.9363630785344539 1.033492653591991 0.9599654757264281 1.186110682370271 0.9759543341342071 1.0 11.604221845886359 -8.73230118946185 24.999959221599358 1.0878856510906572 0.9935769292428173 0.07293921109728341 0.0695772651912768 217.69193163323487 186775.10929920943 0.012827650176461461 0.014544162701101733 1.8522466182442239e-09 8.73230118946185 -0.0943087218478399 LPGNRPTS(ph)PKISPR ddPTM_A549_PD325901_60min_R1 1 LPGNRPTSPKISPR 14 2 Q07343-3 Q07343-3 PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 LPGNRPT(0.13)S(0.503)PKIS(0.367)PR 41.386 0.019391 8715500.0 2987.0 3639.0 3426.8 3091.4 3940.1 4288.6 3414.6 3826.3 4159.5 3921.2 3663.7 True False 3290.2380410868222 3945.6713010716085 3659.3632550224065 3282.3487569212 3663.3609686070868 4253.675063480797 3544.544471540814 3749.981444825719 3984.6906800508864 3673.6147628038234 3213.088126107812 1.0240111419142637 1.2279997143592865 1.1388929003497927 1.0215557831267104 1.1401370970315448 1.3238588225818457 1.1031581868980709 1.1670957339624155 1.240143601314091 1.1433283553457565 1.0 11.649744835143109 -4.3378320481108 14.561596403778367 1.130667811803384 1.1357247316234567 0.0 0.09607655718588873 0.0 0.0 0.014468266244955527 0.0 4.5937562984924614e-05 4.3378320481108 0.005056919820072725 LPGNRPTSPKIS(ph)PR ddPTM_A549_MK2206_60min_R1 1 LPGNRPTSPKISPR 14 2 Q07343-3 Q07343-3 PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 LPGNRPT(0.128)S(0.128)PKIS(0.744)PR 49.049 0.0058533000000000005 4933300.0 4277.1 4545.4 2627.8 2181.5 6519.2 3961.8 2119.1 2276.5 6091.4 6615.0 3990.0 True False 4998.9699149447015 4776.741445026873 3000.461553932463 2715.9675979312547 5560.23431593202 4381.035046369998 2504.1130399253034 2599.2008464888563 4711.707625966964 5120.666905682974 2999.1728816021036 1.6667828472343156 1.5926862617120041 1.000429675907736 0.9055722044540607 1.8539225764677638 1.4607477525702781 0.8349345432156787 0.866639219910661 1.5710023436361746 1.7073596981003667 1.0 11.550348970670454 LPIAHT(ph)PPPPPAPPLPLPEDPGTLSAER ddPTM_A549_MK2206_60min_R1 2 LPIAHTPPPPPAPPLPLPEDPGTLSAER 28 0 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 LPIAHT(1)PPPPPAPPLPLPEDPGTLSAER;LPIAHT(1)PPPPPAPPLPLPEDPGTLSAER 119.54 1.6198e-20 47570000.0 4598.5 5206.4 4520.5 4580.5 6989.9 5412.9 4574.5 4799.3 7620.9 6470.4 7129.9 True False 5374.614377469133 5471.3835216676025 5161.574874249067 5702.722705626456 5961.694969464538 5985.689485207775 5405.627436712895 5479.615472239831 5894.778318076576 5008.732146112038 5359.349054770636 1.0028483538844906 1.0209044915253727 0.9630973503497556 1.064070029279053 1.1123916185600418 1.1168687510434874 1.008635075168516 1.0224404897386072 1.0999056523159891 0.934578452518129 1.0 12.387842066598054 -6.2788222540164025 24.130634097062703 1.054140279516558 0.9981455051338314 0.12669108356693282 0.053590546253401664 593.9716712811635 824540.9123366036 0.006853607665080008 0.01596220165853005 5.262325963016507e-07 6.2788222540164025 -0.0559947743827266 LPIAHT(ph)PPPPPAPPLPLPEDPGTLSAER ddPTM_A549_PD325901_60min_R1 2 LPIAHTPPPPPAPPLPLPEDPGTLSAER 28 0 A0A286YF23;A0A0J9YY01;A0A2R8YFM0;Q96JP2 A0A286YF23 MYO15B Unconventional myosin-XVB 1 LPIAHT(1)PPPPPAPPLPLPEDPGTLSAER;LPIAHT(1)PPPPPAPPLPLPEDPGTLSAER 115.44 2.4969e-20 65515000.0 20453.8 21562.2 21838.7 23042.2 24825.6 25277.5 25314.1 25499.0 25466.2 25625.6 29339.5 True False 22530.254718708282 23379.32226654747 23320.805508771384 24465.46436136693 23081.93549967058 25071.6484207284 26277.441927907028 24990.402441421476 24395.944175096032 24007.595242707743 25730.92749841423 0.8756098947500746 0.9086078326554033 0.9063336527689732 0.9508193734125873 0.8970502715494068 0.9743779512912444 1.021239593074384 0.9712204289161986 0.9481175591746365 0.9330248683879471 1.0 14.651215841022475 -7.271717576824145 21.42007281523124 0.9783143895144283 0.9100568873709071 0.5915044370829605 0.027592749734675192 53.88531863527131 112298.87565980453 0.004147502504692137 0.006689970269308769 5.349121014712122e-08 7.271717576824145 -0.06825750214352122 LPIS(ph)DSPPDTQEIHVIEQEK ddPTM_A549_MK2206_60min_R1 1 LPISDSPPDTQEIHVIEQEK 20 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LPIS(0.512)DS(0.478)PPDT(0.01)QEIHVIEQEK 49.593 0.0046261 2462500.0 908.0 693.06 686.23 747.27 1209.1 980.95 743.52 1239.0 1445.1 1218.8 1246.8 True False 1061.2482015313622 728.3337937013956 783.5477327631761 930.3511835462249 1031.2429916850851 1084.75347789809 878.6079597212314 1414.6320442783638 1117.7871573505045 943.472233506638 937.1851500705521 1.1323783795032074 0.7771503780726423 0.8360650322982496 0.9927079867582059 1.100362069978864 1.1574590974007952 0.9374966725145922 1.5094477800591153 1.1927068597558939 1.0067084753056668 1.0 9.872190284298751 -6.622593628050723 3.0818646594044474 1.1194405994667394 0.9021057214937253 0.2532800894703845 0.1631432371458943 0.27266229132420783 5.176515249368674 0.023830125123820857 0.05367387873944551 2.3845496632026494e-07 6.622593628050723 -0.2173348779730141 LPISDS(ph)PPDTQEIHVIEQEK ddPTM_A549_PD325901_60min_R1 1 LPISDSPPDTQEIHVIEQEK 20 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LPIS(0.017)DS(0.981)PPDT(0.002)QEIHVIEQEK 117.64 9.7799e-15 2964400.0 1437.5 1496.2 1645.2 1067.2 1668.4 1362.6 1208.8 1446.3 1585.6 1106.8 1627.0 True False 1583.4339417684305 1622.2900249143559 1756.8531653912876 1133.1185202129477 1551.217339667537 1351.5034373685896 1254.8015454807407 1417.4524118996 1518.96274607253 1036.9164591123297 1426.889314402765 1.1097104209734645 1.1369417435110427 1.231246984372177 0.794118022172745 1.0871322141176805 0.9471676770768105 0.8793965536184194 0.9933863808440427 1.064527381865147 0.7266971927295838 1.0 10.478657712148802 -6.214374915515236 24.999991057079217 1.0030744394168518 1.157063919107553 0.3161313998876655 0.11968326404416761 325.5223167960721 172912.4224145959 0.011835705292625062 0.03131427372153777 6.104148415892597e-07 6.214374915515236 0.1539894796907011 LPISDS(ph)PPDTQEIHVIEQEKLEAQDSGEEAR ddPTM_A549_MK2206_60min_R1 1 LPISDSPPDTQEIHVIEQEKLEAQDSGEEAR 31 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LPIS(0.078)DS(0.71)PPDT(0.212)QEIHVIEQEKLEAQDSGEEAR 46.773 0.0046636 8537700.0 542.55 590.68 609.57 622.07 861.29 726.09 899.91 825.14 1096.8 789.0 691.23 True False 634.1191759260364 620.7430890017325 696.0161920353955 774.4771779257835 734.5953819439634 802.9243618604663 1063.411998376283 942.1061218852687 848.376551229695 610.7643520157015 519.5785140225117 1.2204491887410147 1.1947050777677801 1.339578472263846 1.4905873838582706 1.4138294061792855 1.5453378848257726 2.0466820118166176 1.813212241190655 1.6328168473743652 1.175499631975234 1.0 9.021197962450277 -5.933863363187972 3.5477603103576416 1.4309271623166075 1.208065245673799 0.11263024576153391 0.27548757671575563 0.5773515363236721 14.597525160681545 0.04949456398588986 0.17172860807028514 1.1644923419027288e-06 5.933863363187972 -0.22286191664280852 LPISDS(ph)PPDTQEIHVIEQEKLEAQDSGEEAR ddPTM_A549_PD325901_60min_R1 1 LPISDSPPDTQEIHVIEQEKLEAQDSGEEAR 31 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LPIS(0.139)DS(0.835)PPDT(0.026)QEIHVIEQEKLEAQDSGEEAR 50.253 0.0035814 4510000.0 948.9 1148.2 1119.9 981.07 1535.8 1082.8 1061.1 1425.6 1180.8 1139.2 1426.9 True False 1045.23162945674 1244.9628436082512 1195.903148505775 1041.6684657283702 1427.9307062223716 1073.9820358011962 1101.4807411561997 1397.1652896384344 1131.175082342611 1067.2707175829114 1251.4003458643556 0.8352495929148775 0.9948557611659776 0.9556519242287344 0.8324022517421302 1.1410662550489266 0.858224180095927 0.8801985270312477 1.1164814635506572 0.903927417057965 0.8528611336172647 1.0 10.28932769254677 -11.062498829111833 0.006341345192541314 1.9399962615026511 2.190459856262065e-06 0.0 0.1052175234778971 31695.889367871114 39.83421172886163 6313.302216198058 5877.864355058115 8.659666580633329e-12 11.062498829111833 -1.939994071042795 LPKS(ph)LS(ph)SSPVKK ddPTM_A549_PD325901_60min_R1 1 LPKSLSSSPVKK 12 2 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 LPKS(0.971)LS(0.895)S(0.079)S(0.055)PVKK 61.657 0.0025381 22808000.0 4539.2 4756.3 5188.7 4867.5 5544.3 5954.1 5547.9 5963.7 6307.1 4938.5 6665.6 True False 5000.016242417577 5157.130093236302 5540.836384187801 5168.154420105434 5154.887494796647 5905.611783675561 5759.028370427369 5844.749325067855 6042.034520531066 4626.682267190317 5845.773456719775 0.8553215890824521 0.8821980754844562 0.947836317163224 0.8840839383135158 0.8818144481584472 1.0102361693279445 0.9851610591935116 0.9998248081867178 1.0335731559329735 0.7914576747533554 1.0 12.51317820562956 -7.2651656210107705 24.683694234773185 1.0119785187046932 0.8926600772347534 0.11005182741349351 0.0706131538710894 77.45024274484268 513052.9096747331 0.003832815976044718 0.006270264821246313 5.430431989616003e-08 7.2651656210107705 -0.11931844146993986 LPLLPPES(ph)PGPLR ddPTM_A549_MK2206_60min_R1 3 LPLLPPESPGPLR 13 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A669KAX5;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR 206.46 2.7767e-31 255789000.0 29863.3 30780.9 28368.2 26866.4 43232.8 34002.4 32668.5 32607.199999999997 47897.5 44326.5 43966.7 True False 34903.4949524136 32347.516334146105 32391.237329426483 33448.66920607854 36873.312390143874 37600.51139903358 38603.94358208666 37229.370455361954 37048.79272659037 34313.11286390876 33048.55497081081 1.0561277182388493 0.9787876160611598 0.9801105481929578 1.012106860212833 1.1157314570247072 1.1377354148235272 1.1680977766254073 1.1265052432169496 1.121041230374903 1.0382636364650388 1.0 15.012299571644853 -6.666895843322526 6.7184048703797945 1.0817653881018416 1.0016622474507242 0.4177186928533796 0.05032143930132538 0.24738246994476387 14.959161529127257 0.00945422215776519 0.019763020374350713 2.1532980974515053e-07 6.666895843322526 -0.08010314065111745 LPLLPPES(ph)PGPLR ddPTM_A549_PD325901_60min_R1 2 LPLLPPESPGPLR 13 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A669KAX5;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR 249.45 1.3431999999999997e-68 433690000.0 17517.4 18573.1 19738.0 17519.3 19463.2 19144.7 20887.0 20525.6 22655.0 21816.0 23827.0 True False 19295.753552371712 20138.320319300125 21077.539374236094 18601.42737178287 18096.171976394875 18988.791910605054 21681.866214804955 20116.200805978293 21702.889134884685 20438.534036858156 20896.430051797593 0.9233995234852 0.963720610141623 1.008666998237956 0.8901724995931878 0.8659934702501095 0.9087098544361918 1.0375870979425883 0.9626620794133119 1.0385931511309854 0.9780873568449532 1.0 14.350968872741461 -7.760008846775942 24.999998804225974 1.014956509440887 0.9277519241331387 0.44868897252701223 0.04138229793678356 24.629491837318056 430420.1183485792 0.006612044211821409 0.009515233819804738 1.7377654293173814e-08 7.760008846775942 -0.08720458530774833 LPLPDDEHDLS(ph)DR ddPTM_A549_MK2206_60min_R1 1 LPLPDDEHDLSDR 13 0 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20;A0A5F9ZH87;A0A5F9ZHE1;H0Y326;H0Y325;A0A5F9ZHB2 Q8NF91 SYNE1 Nesprin-1 1 LPLPDDEHDLS(1)DR 54.233999999999995 0.0032607 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LPLPDDEHDLS(ph)DR ddPTM_A549_PD325901_60min_R1 2 LPLPDDEHDLSDR 13 0 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20;A0A5F9ZH87;A0A5F9ZHE1;H0Y326;H0Y325;A0A5F9ZHB2 Q8NF91 SYNE1 Nesprin-1 1 LPLPDDEHDLS(1)DR;LPLPDDEHDLS(1)DR 97.836 4.984e-05 8089500.0 1549.5 1181.84 1139.73 1333.6 1899.1100000000001 1084.26 1232.75 1488.65 1396.27 1530.2 1670.81 True False 1706.8040993183893 1281.4378044678401 1217.0789315532534 1415.9734431746494 1765.723065173829 1075.430146045257 1279.6629758366837 1458.9577079266671 1337.58962755972 1433.5829108544335 1465.3109621372366 1.1648067498443617 0.8745159475220144 0.8305942990954471 0.966329659548424 1.2050159391412896 0.733926227151596 0.8733047174984788 0.995664228020718 0.9128367030086036 0.9783472231474157 1.0 10.516991144481915 -4.221390807442418 15.920078017510244 0.9535718378809221 0.953117289288686 0.0 0.13151837560911478 0.0 0.0 0.015916613439507357 0.0 6.0063300417113126e-05 4.221390807442418 -0.0004545485922361481 LPLPS(ph)PALEYTLGSR ddPTM_A549_PD325901_60min_R1 2 LPLPSPALEYTLGSR 15 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 LPLPS(1)PALEYTLGSR;LPLPS(0.997)PALEYT(0.003)LGSR 182.52 3.2295e-33 68881000.0 15271.2 15720.6 15413.0 15375.5 18375.1 16991.4 17309.1 17589.4 18731.9 17800.3 20160.6 True False 16821.520981936752 17045.43013345051 16459.018865898306 16325.209714705928 17084.496366653657 16853.027671880725 17967.80727240295 17238.565618382643 17944.66338493695 16676.386020181802 17680.974008573063 0.9513910813838885 0.9640549284889852 0.9308886975297707 0.9233207235523474 0.9662644353399202 0.953173035812909 1.0162227071704766 0.9749782794785 1.014913735874281 0.9431825425508708 1.0 14.109910131577024 -7.712272012102123 6.37588680227155 1.004926279621001 0.9474561241494303 0.35731381654478955 0.024285166419375236 0.07316060770918108 6.769306073420481 0.0024452448245186158 0.003615764229803958 1.9396706211940435e-08 7.712272012102123 -0.05747015547157075 LPLS(ph)PPLVEDSAFEPSRK ddPTM_A549_MK2206_60min_R1 2 LPLSPPLVEDSAFEPSRK 18 1 O96007 O96007 MOCS2 Molybdopterin synthase catalytic subunit 1 LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK 114.46 2.4627e-10 59460000.0 2457.84 2920.7 2338.4300000000003 2349.5 2917.0 2273.49 2337.7 2578.3999999999996 3950.6 3404.3999999999996 4216.3 True False 2872.663303581325 3069.351154681654 2670.054536708383 2925.1276054730647 2487.913164126533 2514.0692027794757 2762.4298303210703 2943.8960960188315 3055.7954078118464 2635.3436755415155 3169.276346039835 0.9064098519432859 0.9684706600347293 0.8424808205963944 0.9229638838936068 0.7850098547686766 0.7932628550744486 0.8716279455317492 0.9288858952604032 0.9641934227762156 0.8315285219083232 1.0 11.629937746111198 -8.592757272046937 1.9529451922856615 0.9850331481315628 0.8687741319318596 0.021831434026800767 0.06863167531075676 0.20673961265854335 1.55299051661767 0.00984443913488267 0.011270650725111585 2.554128410697788e-09 8.592757272046937 -0.11625901619970325 LPLS(ph)PPLVEDSAFEPSRK ddPTM_A549_PD325901_60min_R1 2 LPLSPPLVEDSAFEPSRK 18 1 O96007 O96007 MOCS2 Molybdopterin synthase catalytic subunit 1 LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK 118.32 1.7146000000000002e-10 69442000.0 7247.6 8074.5 7480.7 7438.6 8905.4 7300.700000000001 8417.7 8740.7 8651.1 9405.7 8975.6 True False 7983.371016598872 8754.966452460214 7988.385287103449 7898.065427713672 8279.915425962166 7241.2455197393665 8738.040179842183 8566.359881553499 8287.524352010632 8811.82249681319 7871.658101016264 1.0141917896012513 1.1122137598087387 1.0148287926875426 1.0033547349692435 1.0518642095104709 0.9199136226209433 1.1100634793467548 1.0882535511098412 1.0528308325460272 1.1194366401248483 1.0 12.942451844429655 -10.803372605203624 1.157564580564782 1.0009521529376253 1.041773318487755 0.0 0.06288892451785065 1.010226836046567 2.4876371331462157 0.031226284081912657 0.00857173357040042 1.5726330368313255e-11 10.803372605203624 0.0408211655501296 LPLVPES(ph)PR ddPTM_A549_MK2206_60min_R1 4 LPLVPESPR 9 0 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR 140.78 4.0697e-05 43049500.0 4193.389999999999 4125.150000000001 3719.2599999999998 3314.88 5633.710000000001 4332.22 3818.28 3798.33 5309.05 5529.68 5323.17 True False 4901.131713457712 4335.102515059753 4246.706994093483 4127.02574881062 4804.998721930513 4790.652644905107 4512.012051383128 4336.75490939777 4106.558651810738 4280.521447470453 4001.2799769819226 1.22489097030259 1.0834289377394746 1.0613371267502958 1.0314263866942759 1.2008654104616838 1.1972800385037268 1.1276421738391922 1.083841904177095 1.0263112492588498 1.0697880358522565 1.0 11.966245864925579 -8.649462343795845 2.129140654493889 1.0106221415685257 1.1288570751133726 0.34115601450200417 0.05948127535375121 0.2106406244978008 1.8874876350864267 0.010780941384949809 0.01210521812451342 2.241494389746365e-09 8.649462343795845 0.11823493354484693 LPLVPES(ph)PR ddPTM_A549_PD325901_60min_R1 2 LPLVPESPR 9 0 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PR;LPLVPES(1)PR 185.96 3.8416e-11 68031000.0 4150.6 4763.5 5000.5 4457.7 5206.4 4265.3 5287.4 4895.0 4611.0 4575.3 5160.2 True False 4571.965856489777 5164.936862504706 5339.864000449267 4733.042004828763 4840.720425104932 4230.564810955708 5488.6149003762985 4797.365384946785 4417.2157051844315 4286.41477717442 4525.528113202919 1.0102612871084327 1.1412893110610354 1.1799427308540145 1.045854071930398 1.0696476309543765 0.9348223467253081 1.2128120217314837 1.060067524705194 0.9760663495377494 0.9471634403660201 1.0 12.143870444115667 -8.660514571737703 5.137586443251079 0.9888219131778526 1.0862357303890278 0.2913693862418101 0.0742361938482647 0.2027199755611194 8.60926774580561 0.012042030795141873 0.013623616262386729 2.1851710001104974e-09 8.660514571737703 0.09741381721117515 LPLVPES(ph)PRR ddPTM_A549_MK2206_60min_R1 4 LPLVPESPRR 10 1 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR 98.40700000000001 0.00020709 803845000.0 5086.4 5063.9 5242.0 4985.099999999999 7306.6 5501.200000000001 4830.09 4686.3 7895.3 7353.0 8058.700000000001 True False 5944.859969459383 5321.6308803343145 5985.3944233632565 6206.449723789644 6231.8088189944965 6083.3333325989815 5707.654831302354 5350.597376191843 6107.0271562033295 5691.952193119711 6057.502381194701 0.9814044791653714 0.878518991070499 0.9880960908814 1.0245889036803921 1.0287752982715985 1.0042642907552908 0.9422455778179409 0.8833009117425328 1.008175774748744 0.9396533150016041 1.0 12.564507351459982 -5.900288286883931 9.903261052532496 0.994270202169253 0.9301395562651439 0.08070305743989459 0.04836760466163124 0.33709268714869073 30.815802479654963 0.0063831545864680836 0.019902017021110472 1.2580900080119726e-06 5.900288286883931 -0.06413064590410911 LPLVPES(ph)PRR ddPTM_A549_PD325901_60min_R1 8 LPLVPESPRR 10 1 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR 99.34299999999999 0.00024708 1269152000.0 12033.44 11725.84 12430.929999999998 12888.960000000001 13677.08 12810.989999999998 12490.06 12947.89 13959.3 14317.829999999998 14103.89 True False 13255.065970249681 12714.017688639058 13274.567663054651 13685.08178624801 12716.449084164511 12706.661544910203 12965.376068123076 12689.63417652679 13372.63916577337 13413.799770303849 12369.200941925032 1.0716186140466064 1.0278770430145798 1.0731952472419546 1.106383658128056 1.0280736115347995 1.027282328468071 1.0481983540405853 1.0259057344210214 1.0811239326258508 1.0844516014642613 1.0 13.594464683876906 LPLVT(ph)PHTQCR ddPTM_A549_PD325901_60min_R1 2 LPLVTPHTQCR 11 0 P62191 P62191 PSMC1 26S protease regulatory subunit 4 1 LPLVT(0.999)PHT(0.001)QCR;LPLVT(1)PHTQCR 102.87 0.00019813 16293900.0 2237.1 2266.79 2621.8 2455.3 2379.3 2413.8 2240.37 2596.3999999999996 2534.0 2931.9 2569.2 True False 2464.2087451340226 2457.820348600197 2799.73111416416 2606.958304609116 2212.186176139397 2394.1428130928407 2325.628506327505 2544.6127651636043 2427.5047922223703 2746.779333638815 2253.2046875006677 1.093646200366913 1.0908109512795734 1.2425551614086683 1.1570002135495485 0.9817954793060679 1.0625500765083649 1.0321425830634021 1.1293304950408996 1.077356533868675 1.2190545088407558 1.0 11.137762662695579 -14.999999999450422 0.059559524669225386 0.6238862595669541 1.2586288685639146 0.0 0.08897366490334066 261.28135827044105 1.1771631837054648 14.487626986116199 2.6020191611298036 1.0000000012654505e-15 14.999999999450422 0.6347426089969606 LPMPS(ph)PER ddPTM_A549_PD325901_60min_R1 1 LPMPSPER 8 0 Q9HD33-3;Q9HD33-2;Q9HD33 Q9HD33-3 MRPL47 39S ribosomal protein L47, mitochondrial 1 LPMPS(1)PER 45.137 0.012833 1002300000.0 1011.3 777.37 964.26 1136.6 1036.1 961.88 1061.2 1009.6 1278.6 1134.7 1143.9 True False 1113.9664315202886 842.8816980802527 1029.7004821664245 1206.8052005941115 963.3279103509559 954.0467681902974 1101.5845467109225 989.4627359841213 1224.864888451272 1063.054848350886 1003.2075517795472 1.1104047507858876 0.8401867555573128 1.026408224638942 1.2029466868081395 0.9602478656008415 0.9509963980015446 1.0980624545308382 0.9862991304530707 1.2209486324923853 1.0596559470322748 1.0 9.970404398036184 LPNGLGGPNGFPKPTPEEGPPELNRQS(ph)PNSSSAAASVASR ddPTM_A549_MK2206_60min_R1 1 LPNGLGGPNGFPKPTPEEGPPELNRQSPNSSSAAASVASR 40 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 LPNGLGGPNGFPKPT(0.007)PEEGPPELNRQS(0.683)PNS(0.205)S(0.065)S(0.022)AAAS(0.008)VAS(0.009)R 43.468999999999994 0.005751 82181000.0 467.08 710.11 650.07 836.89 1208.2 892.35 923.89 634.92 1041.9 1331.0 1137.6 True False 545.9116849903843 746.2515658749576 742.2597010293313 1041.9280875694192 1030.4753804928625 986.7778847060093 1091.7488539741355 724.9218543609511 805.9113135724101 1030.326175580353 855.1025238372309 0.6384166456913636 0.8727042022121394 0.8680359142181887 1.2184832327401136 1.2050898597148965 1.1539878052024588 1.2767461486079654 0.8477601622644027 0.9424733188202069 1.204915371968281 1.0 9.739953594292798 -5.486462028564299 1.6831836039587817 1.025598818165584 0.6061694210780374 0.4320719451581124 0.14693797652143553 0.516337974868677 1.9461312210788142 0.02137870745927834 0.30201348953517737 3.2624057316379293e-06 5.486462028564299 -0.41942939708754656 LPNGLGGPNGFPKPTPEEGPPELNRQS(ph)PNSSSAAASVASR ddPTM_A549_PD325901_60min_R1 2 LPNGLGGPNGFPKPTPEEGPPELNRQSPNSSSAAASVASR 40 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 LPNGLGGPNGFPKPT(0.02)PEEGPPELNRQS(0.804)PNS(0.089)S(0.031)S(0.035)AAAS(0.014)VAS(0.006)R;LPNGLGGPNGFPKPT(0.001)PEEGPPELNRQS(0.931)PNS(0.044)S(0.011)S(0.011)AAAS(0.001)VAS(0.001)R 84.15899999999999 3.3361999999999994e-07 334020000.0 3570.3 3970.0 4360.5 3602.5 4514.799999999999 4583.6 4140.7 5553.3 4712.1 4788.1 4476.4 True False 3932.7542276840577 4304.565832716214 4656.429751816624 3825.018243128882 4197.696023214455 4546.272681287735 4298.276604377981 5442.535075020431 4514.066823769152 4485.77854885774 3925.8311782375763 1.001763460814326 1.096472476090697 1.1861003543985902 0.9743206137677188 1.0692502638635946 1.1580408007581962 1.0948704641720246 1.3863395617189398 1.1498372239724408 1.1426315460848577 1.0 11.938782418862958 -5.265319766107134 6.5097537958080025 1.1010409139963457 0.99993027695783 0.06002417815362093 0.10587846677528204 0.2822415452742297 72.86073139394122 0.015517411013607848 0.12646891380924358 5.428504896451244e-06 5.265319766107134 -0.10111063703851575 LPNLTHLNLSGNK ddPTM_A549_PD325901_60min_R1 1 LPNLTHLNLSGNK 13 0 Q92688;Q92688-2 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 53.754 0.022903 1339300.0 1132.3 1496.2 1061.7 1054.9 1509.3 1466.5 1142.1 1428.3 1572.2 1462.2 1471.6 False True 1247.250262444796 1622.2900249143559 1133.7533465207441 1120.058777148274 1403.2919748023346 1454.5573102165251 1185.5632404811006 1399.8114360203267 1506.125901472775 1369.8764424593862 1290.6025292410009 0.9664092810807521 1.2570020499405183 0.878468250939738 0.8678572618379857 1.0873153763518548 1.1270373932026505 0.9186122091193533 1.0846185439010037 1.1669943823514144 1.061423956192776 1.0 10.333829042561886 LPNNSS(ph)RPST(ph)PTINVLESK ddPTM_A549_MK2206_60min_R1 2 LPNNSSRPSTPTINVLESK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 LPNNS(0.461)S(0.508)RPS(0.129)T(0.738)PT(0.164)INVLESK;LPNNS(0.435)S(0.467)RPS(0.28)T(0.771)PT(0.046)INVLESK 50.945 0.008095999999999999 11794800.0 3665.0 3759.1000000000004 3672.7 3421.1 4691.200000000001 3017.8999999999996 2756.3 2818.2 4646.6 4103.0 3991.7 True False 4283.562399352913 3950.422133585719 4193.544085976008 4259.269653579014 4001.1306943950617 3337.25217488011 3257.0840318749056 3217.68848037553 3594.1525190954644 3176.129450342743 3000.450724684491 1.4276396423085225 1.3166095683844705 1.3976380453363304 1.4195432767944864 1.3335098828579484 1.1122502854070484 1.0855315853312006 1.072401707484759 1.1978708697085514 1.058550778459035 1.0 11.550963521857945 -7.222721786399977 3.3897380583921715 1.0932182284139407 1.3849958024168674 0.8883185598751829 0.05168747715007208 0.08573921467247855 2.032079207496944 0.011062866895429398 0.01942148970121295 5.987950666191417e-08 7.222721786399977 0.2917775740029267 LPNNSSRPS(ph)T(ph)PTINVLESK ddPTM_A549_PD325901_60min_R1 1 LPNNSSRPSTPTINVLESK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 LPNNS(0.277)S(0.297)RPS(0.5)T(0.498)PT(0.427)INVLES(0.001)K 44.816 0.022629 4947400.0 2479.2 2175.6 2392.1 2164.1 3344.9 2399.7 2236.1 3354.0 2598.4 2911.7 2341.8 True False 2730.8865589094207 2358.9454472688626 2554.4422908658507 2297.7715419723 3109.9657632785566 2380.1576388179983 2321.196009140872 3287.1018388379016 2489.1982841794043 2727.8547650861706 2053.773445893299 1.3296922133110975 1.148590878894545 1.2437799777641896 1.1188047769177738 1.514269146627252 1.158919277867446 1.130210351965699 1.6005182292188807 1.2120121083251785 1.328216006756128 1.0 11.004061329749021 -10.049422758071776 0.9811849529735932 1.0234035131996684 1.2690469298522864 0.0 0.1758758805175939 0.4286444340091121 0.8307838605323483 0.055375343700544116 0.027930378792132206 8.924363307299573e-11 10.049422758071776 0.24564341665261802 LPNNSSRPST(ph)PTINVLESK ddPTM_A549_MK2206_60min_R1 2 LPNNSSRPSTPTINVLESK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 LPNNS(0.023)S(0.017)RPS(0.027)T(0.927)PT(0.006)INVLESK;LPNNS(0.004)S(0.003)RPS(0.044)T(0.947)PT(0.002)INVLESK 88.23899999999999 2.501e-06 41597000.0 4974.4 6326.9 6108.700000000001 5413.1 8573.0 6699.1 6671.2 7205.7 10777.900000000001 9708.9 10329.8 True False 5813.957107596487 6648.912185625146 6975.005515833488 6739.309743003295 7311.923056584427 7407.994315497313 7883.270686588496 8227.13004153075 8336.722858769635 7515.6527468761 7764.625572023411 0.7487749478280905 0.8563081534261906 0.898305456088573 0.8679503835040785 0.9416968002848575 0.954069741906027 1.015280210676555 1.0595655856444361 1.0736799580919314 0.9679349863251125 1.0 12.922700640902574 -6.625830025688482 0.644464517102483 1.038474747312285 0.7828365559197759 0.8112096513992281 0.0398964274319033 0.30485510757801304 0.19940347224315838 0.007595274914596279 0.04155580883707787 2.3668458531120563e-07 6.625830025688482 -0.2556381913925092 LPNNSSRPST(ph)PTINVLESK ddPTM_A549_PD325901_60min_R1 2 LPNNSSRPSTPTINVLESK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 LPNNS(0.001)S(0.002)RPS(0.14)T(0.82)PT(0.038)INVLESK;LPNNSS(0.002)RPS(0.031)T(0.782)PT(0.185)INVLESK 152.07 9.5516e-22 63442000.0 13750.9 14637.300000000001 12564.7 12469.2 16918.2 13242.8 14646.7 14954.7 12407.9 15135.2 14703.0 True False 15146.881245122448 15870.836640608828 13417.416099679012 13239.39416439213 15729.923996621512 13134.95502743634 15204.088183481766 14656.416776764807 11886.439112634545 14179.560889010607 12894.624209996222 1.1746663569598423 1.2308103270125061 1.0405433986418549 1.0267374953144144 1.2198823122295643 1.0186380629265495 1.1791028521556444 1.1366300047273035 0.9218135340012384 1.0996490210252325 1.0 13.654482108607187 -8.75472459545442 24.988170489632815 0.9630786113117904 1.1265582452251532 0.2577179641900087 0.08283698882054612 91.02931018552792 338753.17207182397 0.01233274213860189 0.013828621567661814 1.7590387413977947e-09 8.75472459545442 0.16347963391336284 LPNS(ph)IASR ddPTM_A549_MK2206_60min_R1 2 LPNSIASR 8 0 Q9ULT0;Q9ULT0-4;H7C055;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 LPNS(1)IASR;LPNS(0.992)IAS(0.008)R 117.52 0.0012622 96059000.0 3846.5 3381.5 3622.3999999999996 3656.1 5695.4 3935.7000000000003 4002.5 4237.8 5696.9 5086.7 5531.9 True False 4495.695162103951 3553.6039064457204 4136.110789620579 4551.844664128565 4857.614204650756 4352.173161693779 4729.702440800823 4838.5211277182 4406.561246079917 3937.6109371334232 4158.176557326984 1.0811698589811527 0.8546063057818056 0.9946934028889362 1.0946732543397926 1.168207779944148 1.0466542489700106 1.1374462761728508 1.163616085322881 1.059734040950056 0.9469561676487956 1.0 12.021735301389464 -6.010184482334386 23.883843232178123 1.0605568460612431 0.95707854653722 0.217553986710322 0.0808765968222678 298.7285357942911 700566.3795382128 0.010881742484830766 0.031191149498751628 9.768221921543166e-07 6.010184482334386 -0.1034782995240231 LPNS(ph)IASR ddPTM_A549_PD325901_60min_R1 4 LPNSIASR 8 0 Q9ULT0;Q9ULT0-4;H7C055;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 LPNS(0.998)IAS(0.002)R;LPNS(0.995)IAS(0.005)R;LPNS(1)IASR;LPNS(1)IASR 128.81 0.0010662 151839000.0 7765.8 8254.800000000001 8679.2 7611.700000000001 8855.6 8781.0 8178.6 9421.699999999999 8919.8 9277.1 9650.2 True False 8554.178299120198 8950.46096622312 9268.22270426942 8081.8574215750505 8233.613206161495 8709.490447331274 8489.841098501649 9233.776802319331 8544.931825440057 8691.342322760207 8463.286577658004 1.0107395301610296 1.057563262698819 1.0951091658335597 0.9549313198149431 0.9728623898778499 1.0290908109295527 1.0031376133373229 1.0910391273639868 1.0096469908035002 1.026946475581276 1.0 13.047002303624591 -6.252182427268303 24.99715493556169 1.0075528489595658 1.054779909086214 0.20734916789809998 0.037461601566314166 726.1903127412426 1960974.4338765396 0.005088422277464668 0.01324079809604439 5.59522522279334e-07 6.252182427268303 0.047227060126648235 LPNS(ph)VLGK ddPTM_A549_PD325901_60min_R1 2 LPNSVLGK 8 0 Q9NZN3;Q9H223 Q9NZN3 EHD3;EHD4 EH domain-containing protein 3;EH domain-containing protein 4 1 LPNS(1)VLGK;LPNS(1)VLGK 49.35 0.033565 2689600.0 2146.71 2004.8600000000001 2290.83 2652.4 2391.09 2339.0 2080.02 2334.79 2535.3 2465.8 2797.8 True False 2364.642418875625 2173.816588256781 2446.299499679868 2816.232723962537 2223.148087212691 2319.9519594929793 2159.1762993306183 2288.220781842678 2428.750157743242 2310.1089671839386 2453.6883367154614 0.9637093609211044 0.8859383466633255 0.996988681518744 1.147754864308636 0.9060433853586415 0.9454957766146033 0.879971700978503 0.9325637439780635 0.9898364520876348 0.941484267833412 1.0 11.260736296649963 -8.905099200668927 7.660877216900236 0.995545289597056 0.9579489986063143 0.0 0.07089554872339722 0.5849655625133521 41.367083658669955 0.012387394459220984 0.013147211675374994 1.2442303747194975e-09 8.905099200668927 -0.03759629099074169 LPNS(ph)VLGR ddPTM_A549_MK2206_60min_R1 2 LPNSVLGR 8 0 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 LPNS(1)VLGR;LPNS(1)VLGR 65.627 0.0088615 11913500.0 1521.3899999999999 1840.75 1649.5 1407.44 2781.6 2049.4300000000003 1915.19 2582.7 3512.6 2881.4 3136.7 True False 1778.1634375856836 1934.4363125210584 1883.4239033456122 1752.2628631823836 2372.4303247632397 2266.2993222984683 2263.1552323790975 2948.805634187029 2717.0017084695737 2230.4897387807905 2357.770821484038 0.7541714493126455 0.8204513750422432 0.798815510898612 0.7431862533948346 1.0062175268035485 0.961204244979164 0.9598707439065739 1.2506752595788675 1.1523603921603487 0.9460163466510567 1.0 11.203207777883492 -7.107442179115979 1.1649066167250905 1.0822364353261695 0.7771447278201247 0.6431751719415634 0.09143334653595767 0.21021159771273476 0.5607260466756905 0.01506541457500965 0.03514812172524432 7.808323912947317e-08 7.107442179115979 -0.30509170750604486 LPNS(ph)VLGR ddPTM_A549_PD325901_60min_R1 2 LPNSVLGR 8 0 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 LPNS(1)VLGR;LPNS(1)VLGR 90.149 0.0026425 24003000.0 3459.9 2969.3 2833.8 3090.0 3593.3 3230.9 3290.3 2997.6000000000004 3777.5 3507.3 3889.5 True False 3811.1465009562394 3219.5333317592563 3026.118709023721 3280.86228210083 3340.9190042120363 3204.588621601481 3415.514167021245 2937.810516428293 3618.744811610105 3285.8484794404367 3411.1161575719475 1.1172725656076854 0.9438357367609959 0.8871344654465622 0.9618148812722247 0.9794210604044988 0.9394545578543201 1.0012893168236252 0.8612461085228607 1.0608682450104392 0.9632766307727624 1.0 11.736028168050726 -8.827003622837564 24.999999999999556 1.0287433489723976 0.959574130717256 0.06573907524129508 0.06655180136510963 66.35415480508856 25300.491220295848 0.01072034586286356 0.011412454024269178 1.4893486536738193e-09 8.827003622837564 -0.06916921825514166 LPNTYPNSS(ph)SPGPGGLGGSVHYATMAR ddPTM_A549_PD325901_60min_R1 1 LPNTYPNSSSPGPGGLGGSVHYATMAR 27 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 LPNT(0.002)Y(0.004)PNS(0.126)S(0.425)S(0.425)PGPGGLGGS(0.015)VHY(0.002)ATMAR 40.819 0.020965 3308500.0 928.68 1342.3 1074.4 1153.2 941.94 1040.6 1299.9 1291.3 1368.7 1110.4 1639.0 True False 1022.9589099419171 1455.4203318022596 1147.3152448920482 1224.4305448927762 875.7813839165908 1032.1256986098308 1349.368405832573 1265.5440084947475 1311.1782987824618 1040.2891544979507 1437.4133904770324 0.7116664675027337 1.0125273226508982 0.7981804347260814 0.8518290931507366 0.6092759325318003 0.7180437481991876 0.9387476245680165 0.8804314867797031 0.9121789928138369 0.7237230162108838 1.0 10.489259315575733 -8.700914685824955 0.8676638379462409 0.9736177892976866 0.7996270447551049 0.0 0.12695649683494245 0.45558535889518137 0.6921284479878187 0.02472899567793042 0.026449295101092094 1.991064431536367e-09 8.700914685824955 -0.17399074454258168 LPPPKPLPGT(ph)LK ddPTM_A549_MK2206_60min_R1 2 LPPPKPLPGTLK 12 1 O14672-2;O14672 O14672-2 ADAM10 Disintegrin and metalloproteinase domain-containing protein 10 1 LPPPKPLPGT(1)LK;LPPPKPLPGT(1)LK 87.02 0.00011149 6483800.0 2694.8999999999996 3491.1 3290.1000000000004 2888.9 4915.0 3648.1 2789.6000000000004 3275.8 4462.9 4383.2 4405.700000000001 True False 3149.7332360207797 3668.7820783062675 3756.6856528629246 3596.6806296876493 4192.010010861128 4034.139520587209 3296.4342108327255 3740.1546817167578 3452.0602757868423 3393.0320757353893 3311.6430988657626 0.9511089033415355 1.1078434386733356 1.134387233379584 1.086071331454622 1.2658399126092093 1.2181685647130578 0.9954074495412123 1.12939546021664 1.0424010597546496 1.0245766148222621 1.0 11.69333148429847 -8.867891514666402 1.0359571517658708 1.0118748729686358 1.1213537012120869 0.17857473412136182 0.08377200048996654 0.4988179226920521 1.0807505317204649 0.019062030773299467 0.019088722712136786 1.3555279764946566e-09 8.867891514666402 0.10947882824345112 LPPPKPLPGT(ph)LK ddPTM_A549_PD325901_60min_R1 2 LPPPKPLPGTLK 12 1 O14672-2;O14672 O14672-2 ADAM10 Disintegrin and metalloproteinase domain-containing protein 10 1 LPPPKPLPGT(1)LK;LPPPKPLPGT(1)LK 82.259 0.00026325 15475100.0 6035.6 6534.700000000001 6850.3 6567.6 7337.5 7376.5 8157.5 7565.4 7008.7 6789.200000000001 8498.2 True False 6648.329668826121 7085.402102531643 7315.202552200295 6973.265735898194 6822.139313000814 7316.428229670777 8467.93812645528 7414.502162058511 6714.148712410781 6360.528753347883 7452.97527452832 0.8920369951511581 0.9506810155062617 0.9815143996520578 0.9356351630107231 0.9153578351878497 0.9816788544402912 1.1361822379038005 0.99483788540111 0.9008682392060803 0.8534214215208737 1.0 12.863600758144804 -7.2776712642296415 23.524178132332636 0.972598861887872 0.9385281536182835 0.0837840135621194 0.06884639029171705 990.0703420559238 1434864.0264935992 0.01042833421234672 0.016710845806775204 5.2762909497234116e-08 7.2776712642296415 -0.03407070826958858 LPPPKPLPGT(ph)LKR ddPTM_A549_MK2206_60min_R1 2 LPPPKPLPGTLKR 13 2 O14672-2;O14672 O14672-2 ADAM10 Disintegrin and metalloproteinase domain-containing protein 10 1 LPPPKPLPGT(1)LKR;LPPPKPLPGT(1)LKR 60.918 0.0027126 15376600.0 3882.3 5100.3 4905.1 4127.0 6460.5 5489.5 3447.6 4563.0 6466.9 6156.4 6781.1 True False 4537.537326877982 5359.8834848573415 5600.7169374359255 5138.11518526807 5510.169008172598 6070.395246364813 4073.9842935427655 5209.819223601431 5002.157475517246 4765.664964194505 5097.16572116091 0.8902079263462775 1.0515419309609175 1.0987904344927457 1.0080337713834098 1.0810260661718538 1.1909354293040808 0.799264633800231 1.0221012045915712 0.9813605735341826 0.9349637082447255 1.0 12.315479544165992 -7.7368044842236126 24.99999563046022 0.9806973757726509 1.0545907644313486 0.22263779415623197 0.08920746193860928 338.59398114589527 343611.39067430317 0.012745499175073708 0.018899794816187792 1.8331395008460354e-08 7.7368044842236126 0.07389338865869766 LPPPKPLPGT(ph)LKR ddPTM_A549_PD325901_60min_R1 2 LPPPKPLPGTLKR 13 2 O14672-2;O14672 O14672-2 ADAM10 Disintegrin and metalloproteinase domain-containing protein 10 1 LPPPKPLPGT(1)LKR;LPPPKPLPGT(1)LKR 75.911 0.00035699 36631000.0 6019.799999999999 5856.0 6485.299999999999 6765.6 7587.5 7233.700000000001 7059.6 6960.799999999999 7305.400000000001 7487.4 9173.8 True False 6630.92566445746 6349.505671633789 6925.431457276995 7183.495746207566 7054.580175453991 7174.791145525589 7328.256941161346 6821.961383358036 6998.379443212827 7014.644286192326 8045.480757509583 0.8241801657742094 0.789201523564296 0.8607852863003689 0.892860969122641 0.8768376170521949 0.891779044879164 0.9108538273888995 0.8479246410465249 0.8698522380630392 0.871873850378042 1.0 12.973962916394141 -14.999999999998986 0.17002200680624427 1.553174965312177 0.8279366021900257 0.10200924429602665 0.04816600773641479 20.511999937606266 0.22010281885719898 3.778946232105527 0.04336182101788607 1.0000000000023355e-15 14.999999999998986 -0.7252383631221512 LPPQSCLLLPPT(ph)PVR ddPTM_A549_MK2206_60min_R1 2 LPPQSCLLLPPTPVR 15 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 LPPQS(0.001)CLLLPPT(0.999)PVR;LPPQSCLLLPPT(1)PVR 65.374 0.003981800000000001 4105300.0 2069.86 2475.37 2429.56 2022.4299999999998 2725.6000000000004 2787.8 2568.79 2326.91 3869.1 3504.7000000000003 3961.5 True False 2419.2017647816147 2601.355759839877 2774.108141019923 2517.925440790332 2324.6678505804884 3082.803145608129 3035.505892043662 2656.756618363007 2992.75502768309 2712.9858358801375 2977.750218162089 0.8124260221781736 0.8735977060713548 0.9316121023516013 0.8455798023060619 0.7806792646346635 1.0352792946853953 1.0193957416338368 0.8922026441837677 1.0050389752066786 0.9110857651299685 1.0 11.540007026448995 -7.270265014342475 24.999967770659357 0.996727771594438 0.8545819047690972 0.5558303069729453 0.05555907048068771 290.83793986721076 823842.2986071318 0.007345927305305232 0.011849703389830945 5.36704189827456e-08 7.270265014342475 -0.1421458668253408 LPPQSCLLLPPT(ph)PVR ddPTM_A549_PD325901_60min_R1 2 LPPQSCLLLPPTPVR 15 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 LPPQSCLLLPPT(1)PVR;LPPQSCLLLPPT(1)PVR 68.57600000000001 0.0027177 4816100.0 6745.3 7215.7 7009.2 7811.2 7959.200000000001 8770.3 7108.1 7650.3 8566.5 8636.7 8487.5 True False 7430.077890372595 7823.792362501355 7484.886461743625 8293.680083477673 7400.1732497493795 8698.8775845837 7378.602635201566 7497.708764955753 8206.479795806208 8091.377288051554 7443.59130669543 0.9981845569207057 1.0510776371432347 1.0055477461546083 1.1142041175766324 0.9941670552348842 1.1686398710202097 0.9912691778986567 1.0072703425041143 1.1024893035737424 1.0870260005776309 1.0 12.86178313049573 -3.8831740027904194 1.1596863943868447 1.0496413339522517 6.840248817437535e-10 0.06840954918327347 0.05657659149757836 82.508215648452 6.368743529444409 0.00820533177367546 204.64318675136738 0.00013086574961684288 3.8831740027904194 -1.0496413332682268 LPQET(ph)AR ddPTM_A549_PD325901_60min_R1 2 LPQETAR 7 0 Q16821 Q16821 PPP1R3A Protein phosphatase 1 regulatory subunit 3A 1 LPQET(1)AR;LPQET(1)AR 75.738 0.019071 67153000.0 32391.0 4980.0 3439.5 7903.700000000001 6296.5 9726.099999999999 5693.1 6256.6 7798.200000000001 6119.1 8703.0 True False 35679.31047500608 5399.68207731152 3672.925153393708 8391.89359839493 5854.255561745773 9646.893866278171 5909.754035883858 6131.807204792254 7470.468772970995 5732.738981707859 7632.586172862487 4.674603033223939 0.7074511777554487 0.48121633614209597 1.0994823259555386 0.7670081187632661 1.2639089356865065 0.7742793729464692 0.803372155376873 0.9787598336632087 0.7510873577936797 1.0 12.897956257395428 -5.259375572707083 24.9999690727021 0.9296421554150214 4.674604311405262 0.9636352387229101 0.2125197456832608 21.854404092229824 264714.4155364467 0.027286465172155792 0.24793271173696335 5.503315703587311e-06 5.259375572707083 3.7449621559902404 LPQLPITNFSR ddPTM_A549_MK2206_60min_R1 1 LPQLPITNFSR 11 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 0 56.563 0.041305 855090.0 821.64 979.95 762.29 778.99 1379.5 1137.6 916.63 879.12 1389.6 1029.7 1117.5 False True 960.312744830648 1029.8252692951303 870.3941844688247 969.8425849701904 1176.5773774126003 1257.9800769222352 1083.1698059490966 1003.7379521920857 1074.8578187352157 797.0900548422911 839.9939085690098 1.1432377485529746 1.2259913539724494 1.036191067089527 1.1545828786096641 1.4006975115057496 1.4976061898654658 1.2894972152766613 1.1949347988749415 1.2796019206452502 0.9489236132678527 1.0 9.714235055631425 -10.706565136161592 0.8570219927591267 0.9924342263835859 1.250500187317314 0.4233769359797841 0.12093031068094484 0.6154192164412341 0.7653362182145474 0.10369755060970168 0.024064319306827668 1.965327195646481e-11 10.706565136161592 0.25806596093372813 LPQTLSR ddPTM_A549_MK2206_60min_R1 2 LPQTLSR 7 0 O95994;B5MC07;C9J3E2 O95994 AGR2 Anterior gradient protein 2 homolog 0 ; 130.22 0.015818000000000002 18969600.0 6172.2 6460.1 6278.799999999999 5512.0 9070.7 6005.700000000001 6474.200000000001 6031.9 9569.099999999999 10654.900000000001 9604.3 False True 7213.916464198101 6788.891496681946 7169.228253608014 6862.440247443083 7736.4120458836305 6641.219187738986 7650.478336597804 6886.940296919014 7401.714128712687 8247.950689850566 7219.287244804781 0.9992560511274093 0.9403825151253593 0.9930659371902966 0.9505703284464133 1.0716310050484539 0.9199272674069326 1.059727654153576 0.9539640221235228 1.025269376009271 1.1424882277382775 1.0 12.817640692530082 LPQTLSR ddPTM_A549_PD325901_60min_R1 2 LPQTLSR 7 0 O95994;B5MC07;C9J3E2 O95994 AGR2 Anterior gradient protein 2 homolog 0 ; 126.57 0.01624 36626000.0 10080.9 9839.0 10264.099999999999 10988.1 12868.9 11212.0 11693.8 12258.6 12921.2 13096.9 13354.900000000001 False True 11104.305546833648 10668.167059973499 10960.683549047346 11666.809981214286 11965.032859294875 11120.693189326757 12138.81395809289 12014.092606314336 12378.166898683383 12269.95949886907 11712.331963686227 0.9480866475832695 0.9108491027277801 0.9358241879610869 0.9961133288730989 1.021575626134244 0.9494858260341468 1.0364130726254137 1.0257643519295483 1.0568490491100797 1.0476102911795664 1.0 13.515740729299816 -6.456098067742218 0.8147096006718515 1.0260350721980938 0.916649835974981 0.6461200090384689 0.028256372898791255 0.412571258033868 0.4462100039385899 0.005170074160905851 0.028143938387027913 3.4986615506884046e-07 6.456098067742218 -0.1093852362231128 LPQTS(ph)DDEK ddPTM_A549_MK2206_60min_R1 1 LPQTSDDEK 9 0 Q9GZT3-2;Q9GZT3 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 1 LPQT(0.168)S(0.832)DDEK 108.35 0.00044799 8695500.0 5443.4 5873.1 5358.8 5432.7 8189.3 6975.1 5465.5 6492.1 9055.8 7361.0 8134.4 True False 6362.112841647379 6172.0157039616615 6118.758419671696 6763.711743883168 6984.664818300114 7713.2004523033465 6458.510603422087 7412.375056222408 7004.675759141028 5698.14498756347 6114.4039819809905 1.0405123476296922 1.0094222956400087 1.0007121606134528 1.1061931406259176 1.1423296267115752 1.2614803462502597 1.0562780317517735 1.2122808826610916 1.145602380834444 0.9319215747529561 1.0 12.577996159678342 -6.265745289469671 23.404904287250027 1.1005160351557528 1.0161362661185842 0.17218778186015327 0.08716547363352407 212.99128560256634 1157730.7777230854 0.012203181024066596 0.029357719793150876 5.423188631863058e-07 6.265745289469671 -0.0843797690371686 LPQTS(ph)DDEKKDF ddPTM_A549_MK2206_60min_R1 2 LPQTSDDEKKDF 12 2 Q9GZT3-2;Q9GZT3 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 1 LPQT(0.011)S(0.989)DDEKKDF;LPQT(0.044)S(0.956)DDEKKDF 128.9 6.631100000000001e-07 17299500.0 4630.5 6074.0 5670.9 4521.3 7540.4 5649.0 5155.8 5518.2 7682.4 7781.6 8293.7 True False 5412.015195144247 6383.140655848379 6475.118892684224 5629.018702968869 6431.217148707476 6246.773430497284 6092.542122243822 6300.421748778746 5942.348666271895 6023.731155444088 6234.145395524655 0.8681246348584368 1.0238998693278285 1.0386538140949613 0.9029334970290888 1.031611670995722 1.0020256240705734 0.9772858564732085 1.0106311850380758 0.9531937882837583 0.9662481019079826 1.0 12.605976087196156 -5.2493588455320195 24.281504469984565 0.9856524120274548 0.8681245267975883 0.4584749238490279 0.037928945842316965 867.56281951127 1743727.2498381454 0.004972046097501243 0.1117709136665038 5.631721299547919e-06 5.2493588455320195 -0.11752788522986646 LPQTS(ph)DDEKKDF ddPTM_A549_PD325901_60min_R1 4 LPQTSDDEKKDF 12 2 Q9GZT3-2;Q9GZT3 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 1 LPQT(0.343)S(0.657)DDEKKDF;LPQT(0.046)S(0.954)DDEKKDF;LPQT(0.064)S(0.936)DDEKKDF;LPQT(0.022)S(0.978)DDEKKDF 130.24 5.872e-07 925951000.0 26644.5 26343.4 26650.1 26439.8 30873.700000000004 29126.700000000004 30228.7 29992.899999999998 30279.399999999998 27929.1 31343.3 True False 29349.43002535581 28563.450770170348 28458.736046069982 28072.926396857445 28705.237820482875 28889.501812126626 31379.06972027933 29394.668080525138 29006.862117449902 26165.651859589965 27488.272801548985 1.0677073178530863 1.0391140606171798 1.0353046279599754 1.0212692008526456 1.0442721529911954 1.050975520386231 1.141543884798433 1.0693530398486415 1.0552449885398163 0.9518841743347188 1.0 14.746528638931279 -10.400268305521623 0.9253203141137774 1.00249091438445 1.0574838038245191 0.4296679313891233 0.03371795869971492 0.5124392975989083 0.8367276787122575 0.016797107712609515 0.0059810078906104396 3.9786129737632185e-11 10.400268305521623 0.05499288944006908 LPQTSDDEKKDF ddPTM_A549_PD325901_60min_R1 2 LPQTSDDEKKDF 12 2 Q9GZT3-2;Q9GZT3 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 0 ; 63.76 0.0033629 7536700.0 5531.1 4961.6 5929.4 5802.8 7327.5 6350.1 5822.1 6252.4 7554.5 7118.1 6471.1 False True 6092.613200219391 5379.7314447367135 6331.804740378738 6161.225776885014 6812.841678502687 6298.386890968947 6043.663201475365 6127.690977087086 7237.010636481411 6668.6619512174575 5675.1957236826875 1.0735512036694723 0.9479376054445142 1.1156980390924687 1.0856411085831128 1.2004593339525866 1.1098096343507013 1.0649259507042297 1.0797320965541555 1.2752001849524315 1.1750540908023699 1.0 12.470454432962947 -5.850004212216536 8.027290003904243 1.1246183133077918 1.0112444616388307 0.25030815813691576 0.07492153236330687 0.30743429871002237 24.106911118655123 0.013939875649074009 0.043757289927240844 1.4125238445059043e-06 5.850004212216536 -0.11337385166896108 LPREPS(ph)NPER ddPTM_A549_MK2206_60min_R1 2 LPREPSNPER 10 1 E7EX17;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 LPREPS(1)NPER;LPREPS(1)NPER 95.264 0.0001564 30192000.0 3050.4 3998.3 3736.7 2652.7 4703.8 4085.6 3768.1000000000004 3874.5 5728.7 6338.9 6328.6 True False 3565.2329448802525 4201.796391879913 4266.620248336799 3302.6116190842263 4011.8772510861804 4517.935480198212 4452.714994923571 4423.722240158608 4431.158596854082 4906.938087442754 4757.033959525581 0.7494655230999893 0.8832807223219736 0.896907670754217 0.6942585752348919 0.8433568659001722 0.9497379078304469 0.9360275820624245 0.9299328694722595 0.9314961033610114 1.031512099596641 1.0 12.215846609114077 -7.228294691751599 3.962136214162896 0.9604520175777146 0.8131116894762408 0.611105965099384 0.059808314377898 0.12103094738493954 4.2281177001617865 0.008644660474739581 0.015010369884050146 5.9116036450869586e-08 7.228294691751599 -0.1473403281014738 LPREPS(ph)NPER ddPTM_A549_PD325901_60min_R1 2 LPREPSNPER 10 1 E7EX17;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 LPREPS(1)NPER;LPREPS(1)NPER 121.56 1.1952999999999999e-05 41451000.0 5866.2 5641.5 5680.8 5583.0 7140.1 6995.4 6144.3 7030.0 6979.4 6364.5 6962.9 True False 6461.732305531809 6116.9290038459685 6066.333249425493 5927.849230087033 6638.60400800778 6938.431781717475 6378.124698789969 6889.781135071689 6686.0800895172915 5962.644383827632 6106.507441459749 1.0581715272563632 1.0017066322257242 0.9934210852243467 0.9707429798316911 1.087135989212982 1.1362357039982343 1.0444799682853232 1.1282686873177215 1.094910659425807 0.9764410247573976 1.0 12.5761317649469 -6.766720221131629 24.998231901631716 1.0616487937873784 1.0048038845048053 0.25254205333617397 0.0497817888037692 160.7882542257183 761137.6114202121 0.007654939551831587 0.014779380654062117 1.711117286925898e-07 6.766720221131629 -0.05684490928257313 LPRLS(ph)CEPVMEEK ddPTM_A549_MK2206_60min_R1 1 LPRLSCEPVMEEK 13 1 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 LPRLS(1)CEPVMEEK 66.965 0.0012910999999999999 1923900.0 961.46 1290.6 1100.4 765.93 1156.0 949.58 921.87 991.26 1307.1 1084.3 1204.7 True False 1123.7309425598507 1356.2860274016987 1256.4532665907916 953.5828843839042 985.9539313439398 1050.0639253198099 1089.361846121439 1131.7741406064326 1011.0439370097878 839.3558769209449 905.5397419714415 1.240951545774664 1.4977653266204993 1.3875186348590067 1.0530547033837174 1.0888024960643135 1.1596000447575345 1.2029972795559478 1.2498337600760168 1.1165097346347872 0.926912246936387 1.0 9.82263414877119 -2.0000000000075846 0.12263706111110656 0.9390407836894648 2.346881567083153 0.512037910768489 0.11109138086321997 50.474547562453125 0.4081482274301823 0.3775185699013014 12.257358822149438 0.009999999999825359 2.0000000000075846 1.4078407833936883 LPRLS(ph)CEPVMEEK ddPTM_A549_PD325901_60min_R1 2 LPRLSCEPVMEEK 13 1 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 LPRLS(1)CEPVMEEK;LPRLS(1)CEPVMEEK 56.851000000000006 0.0041270000000000005 3998000.0 2042.81 1873.56 2151.77 2013.4899999999998 1522.65 1995.35 1832.96 2281.01 1738.4699999999998 2265.3 2393.1 True False 2250.1945673627615 2031.4514764593926 2297.802051844159 2137.8587043324283 1415.7043168573337 1979.1005311561844 1902.7142958341974 2235.5134661322713 1665.4081515922753 2122.2685714014847 2098.763871110792 1.072152326584421 0.9679275998705973 1.094835909590927 1.0186275520365924 0.6745419703208717 0.9429838956150534 0.9065880740681735 1.0651572084424643 0.793518591832268 1.0111993067034515 1.0 11.035324144888893 -6.552078289993629 24.999536608183842 0.9010934548928018 1.0405118327300007 0.24181645841840937 0.10562641789426648 210.88531184532275 180551.28064193917 0.015529398151553428 0.03232741523231569 2.804927949772296e-07 6.552078289993629 0.1394183778371989 LPRS(ph)PPLK ddPTM_A549_MK2206_60min_R1 3 LPRSPPLK 8 1 I3L2E0;A0A3B3ISX4;Q96E14 I3L2E0 RMI2 RecQ-mediated genome instability protein 2 1 LPRS(1)PPLK;LPRS(1)PPLK;LPRS(1)PPLK 63.283 0.0027785 7809500.0 2508.0099999999998 2694.05 2740.2200000000003 2345.41 3659.28 2950.8199999999997 2388.1400000000003 2601.1499999999996 3724.4399999999996 4354.94 4233.65 True False 2931.300773042592 2831.165637782077 3128.824400379335 2920.0355552894544 3121.0047594189036 3263.073813804211 2822.0341254151376 2969.870978187783 2880.8602867085406 3371.156029362812 3182.317862204196 0.9211213021355007 0.8896552011372938 0.9831904089593962 0.9175813610482408 0.980733193401735 1.025376456751583 0.8867857478763884 0.9332414632304316 0.9052710670181594 1.0593398193817822 1.0 11.635862229483353 -6.626488382615119 0.006158196214145969 1.868417932861416 2.916856384401216e-07 0.17069235554175044 0.05043397996019637 15049.054464271096 22.274169377077516 3284.342003000646 3474.8285101627953 2.3632606155707155e-07 6.626488382615119 -1.8684176411757776 LPRS(ph)PPLK ddPTM_A549_PD325901_60min_R1 2 LPRSPPLK 8 1 I3L2E0;A0A3B3ISX4;Q96E14 I3L2E0 RMI2 RecQ-mediated genome instability protein 2 1 LPRS(1)PPLK;LPRS(1)PPLK 61.353 0.0030318000000000003 19311800.0 2092.2200000000003 1999.92 2031.58 1807.38 2275.67 2247.47 1987.5299999999997 2647.93 2474.79 2356.26 2504.3 True False 2304.6206341890406 2168.460277119851 2169.4552356829754 1919.0177577422007 2115.8347898353063 2229.1673494663037 2063.1665417681475 2595.1149588891008 2370.7831826140487 2207.485341478152 2196.28697606567 1.049325820944144 0.9873301170343111 0.9877831355031939 0.8737554694149501 0.9633690009060282 1.0149708912172917 0.9393884151988241 1.1815919263601304 1.0794505492451463 1.0050987714877508 1.0 11.100850859905423 LPS(ph)DEDES(ph)GTEESDNTPLLKDDKDR ddPTM_A549_PD325901_60min_R1 1 LPSDEDESGTEESDNTPLLKDDKDR 25 2 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 2 LPS(0.989)DEDES(0.951)GT(0.058)EES(0.001)DNTPLLKDDKDR 69.20100000000001 4.1375e-05 4740800.0 1542.2 1893.6 2144.4 1617.6 1631.8 1915.3 2122.2 1851.5 1990.1 2091.3 2195.7 True False 1698.763008692365 2053.180317589778 2289.9318793247485 1717.5154781638535 1517.1879974043914 1899.7024318156914 2202.9614823123993 1814.5703800263486 1906.4630177591707 1959.2549610965089 1925.6428196890902 0.8821797019276105 1.0662311289490747 1.1891778973290985 0.8919179925803475 0.7878865082826487 0.9865289722433639 1.1440135521436339 0.9423192927956 0.9900397925649492 1.0174550238828017 1.0 10.91112441253139 -6.258751412118174 0.0031657422461841213 1.296918635556548 0.6825737771993269 0.0029197152562004947 0.11038760986719892 932430.1835630949 606.0776260292283 57802.73020675982 59823.041318491414 5.511230660889963e-07 6.258751412118174 -0.6143448583572212 LPS(ph)DSER ddPTM_A549_MK2206_60min_R1 2 LPSDSER 7 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 LPS(0.995)DS(0.005)ER;LPS(0.808)DS(0.192)ER 69.812 0.021736000000000002 66139000.0 3328.2 3255.4 3458.6 3092.5 4664.9 3944.6000000000004 3120.2 3699.8 4869.5 4219.6 5065.6 True False 3889.918793322337 3421.0859550623677 3949.081486578439 3850.1626388276004 3978.6993895556607 4362.014953786437 3687.0999514770124 4224.257980162296 3766.566024993621 3266.3894293605254 3807.671716552283 1.0216003591939187 0.8984718772342182 1.037138120235375 1.0111592924596429 1.0449166014653797 1.1455858799025072 0.9683345167202481 1.1094070851221431 0.9892045074736951 0.8578442871430443 1.0 11.894693384810564 -4.85844479926292 20.411754490357016 1.0104141727257667 9.696984149195954 0.0005629618004036052 0.07869029001530102 8426.185658596049 1291208.1260519524 0.008251345817192885 215405.07893019545 1.3853362570604032e-05 4.85844479926292 8.686569976470187 LPS(ph)DSER ddPTM_A549_PD325901_60min_R1 2 LPSDSER 7 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 LPS(0.999)DS(0.001)ER;LPS(0.98)DS(0.02)ER 99.7 0.011354000000000001 80192000.0 12136.599999999999 11066.3 11039.400000000001 10453.900000000001 14613.900000000001 11393.3 10154.6 11653.3 12353.6 11716.3 11832.1 True False 13368.698697507296 11998.895938183232 11788.600069304985 11099.613660470506 13587.470079218074 11300.51674223657 10541.038859810338 11420.865789663007 11834.421152801213 10976.530818483734 10376.82670986168 1.288322439152065 1.1563164996077278 1.1360505864573818 1.0696539482462324 1.3094051253939838 1.0890146918900607 1.0158248908399519 1.1006125580577653 1.1404662989653955 1.0577926301932095 1.0 13.341077706686772 -7.497550585716138 24.71989369511246 1.0670251659065246 1.181984343240763 0.42789731315733115 0.07176445429290036 593.9797787807942 579715.5346015733 0.011772121873276727 0.018771809601687926 3.1801632479685397e-08 7.497550585716138 0.11495917733423844 LPS(ph)DSGDLEALEGK ddPTM_A549_PD325901_60min_R1 1 LPSDSGDLEALEGK 14 0 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 LPS(0.998)DS(0.002)GDLEALEGK 77.527 0.00071376 702590.0 858.14 1170.2 788.59 978.21 983.67 1042.8 1033.2 1009.3 963.05 1511.9 1546.0 True False 945.2577410707212 1268.8168608172568 842.108459576899 1038.6318100239007 914.5804126772756 1034.3077825392386 1072.5189913887339 989.1687197194667 922.5763575965876 1416.4383759775326 1355.8518009014606 0.697168923950428 0.9358079253010269 0.6210918177171054 0.7660363834257912 0.6745430526176988 0.7628472240487949 0.7910296617046582 0.7295551911070233 0.6804404116904204 1.0446852488124365 1.0 10.404983780401123 -10.819911029627852 0.968891527406398 1.0064212984514616 0.7392197075023335 0.6464316640562653 0.07970679977904957 0.3017579655608476 0.48287250106735513 0.05781536819250941 0.012998242041255064 1.5138713511606523e-11 10.819911029627852 -0.2672015909491281 LPS(ph)GSGAAS(ph)PTGSAVDIR ddPTM_A549_PD325901_60min_R1 1 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(0.967)GS(0.033)GAAS(0.87)PT(0.129)GS(0.001)AVDIR 131.31 1.7272e-12 15753000.0 3320.2 4365.4 3943.2 4610.3 4727.9 4014.7 4773.3 4522.6 4203.5 5426.4 5722.8 True False 3657.2642597979466 4733.287578372635 4210.809264387868 4895.067760249015 4395.828614369546 3982.0056142695444 4954.950543549987 4432.393195088934 4026.84151306501 5083.776177924781 5018.931879818159 0.728693743484411 0.9430866351077326 0.8389851397107286 0.9753206214917521 0.8758494276532821 0.7933970234347585 0.9872520014616156 0.8831347587944396 0.802330378154267 1.0129199398715432 1.0 12.293164649704426 -11.011682754721493 1.2913294285378747 1.0000965452078994 0.8679711737985026 0.326374253418258 0.07522946033724416 0.4466639406130683 1.3246811062257704 0.05156582168441539 0.011656779443577561 9.73458059897989e-12 11.011682754721493 -0.13212537140939673 LPS(ph)GSGAASPT(ph)GSAVDIR ddPTM_A549_PD325901_60min_R1 1 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(0.877)GS(0.123)GAAS(0.36)PT(0.611)GS(0.029)AVDIR 113.73 9.4985e-10 20153000.0 5200.1 6132.7 5826.4 5702.3 6675.4 5120.8 5806.9 4895.9 5774.9 7127.7 7091.8 True False 5728.0103238887095 6649.524151712524 6221.814540989416 6054.518120137075 6206.542932879812 5079.097902595832 6027.8847571576025 4798.247433740749 5532.201035755707 6677.655805579109 6219.553558624177 0.9209680839464945 1.069132066961967 1.0003635280802596 0.9734650667557546 0.9979081093808857 0.816633839506541 0.9691828682460976 0.7714777899271225 0.8894852313128857 1.0736551655415392 1.0 12.60259531166194 -7.1086061801455624 19.70951904505161 0.924754989695194 0.9960793276295902 0.15306763531517598 0.08407171771065487 7.764161276626064 1395.5176507446522 0.01151391183584658 0.019942763698158623 7.787423974670876e-08 7.1086061801455624 0.07132433793439619 LPS(ph)GSGAASPTGSAVDIR ddPTM_A549_MK2206_60min_R1 2 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPS(0.5)GS(0.5)GAAS(0.001)PTGSAVDIR;LPS(0.5)GS(0.5)GAASPTGSAVDIR 267.95 2.0169999999999996e-100 177240000.0 13363.3 14040.4 11795.8 9428.1 14289.5 10059.0 7688.200000000001 9259.8 13040.5 13238.900000000001 13555.9 True False 15618.69833868288 14754.996388602827 13468.62181211528 11737.984923243497 12187.533479186193 11123.436703376194 9085.04642232727 10572.40500694817 10086.847571399383 10248.22329518463 10189.595906192964 1.5328084138439928 1.4480452929085377 1.3218013683868868 1.1519578432064674 1.1960762322065133 1.091646499604137 0.8916002661897143 1.037568624337943 0.9899163484264245 1.0057536520124448 1.0 13.31480921852215 -6.0130594873986585 0.6374797287905577 0.9901150108779786 1.6553175194165985 0.929770318012575 0.05170538850859362 0.26775069679363095 0.1245382368251895 0.0089016125811223 0.10775432475294705 9.703770409433632e-07 6.0130594873986585 0.66520250853862 LPS(ph)GSGAASPTGSAVDIR ddPTM_A549_PD325901_60min_R1 4 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPS(0.511)GS(0.489)GAASPTGSAVDIR;LPS(0.906)GS(0.093)GAAS(0.001)PTGSAVDIR;LPS(0.512)GS(0.424)GAAS(0.064)PTGSAVDIR;LPS(0.753)GS(0.233)GAAS(0.01)PT(0.003)GSAVDIR 341.97 3.860999999999998e-197 255416000.0 25839.9 29439.300000000003 24144.5 24989.5 32084.199999999997 26250.8 29140.1 26641.0 25888.5 30990.4 30727.8 True False 28463.147625671023 31920.25312823235 25783.090962673185 26533.044659727755 29830.71647648118 26037.022188224993 30249.042451574573 26109.624355539792 24800.496374683826 29033.660855145263 26948.475399573006 1.0562062307288085 1.184491985351354 0.9567550883817981 0.9845842581561466 1.1069537713793576 0.9661779303714356 1.1224769491803557 0.9688720407520158 0.9202931151747747 1.0773767504341005 1.0 14.71791603487628 -8.402743452941733 8.982443560950696 0.9614465214456642 1.0511633009127337 0.08982022144339907 0.0757937141062213 0.3282830768871793 23.037155139221223 0.011124918485166115 0.013448453332606023 3.956002405996402e-09 8.402743452941733 0.08971677946706946 LPS(ph)LGNK ddPTM_A549_MK2206_60min_R1 1 LPSLGNK 7 0 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 LPS(1)LGNK 49.536 0.054379 4809200.0 2593.1 2882.2 2578.1 2136.7 3170.2 2713.4 2276.8 2460.7 3184.2 3120.4 3068.3 True False 3030.751884791825 3028.8916691284494 2943.713346599165 2660.1915959201083 2703.867779538547 3000.530186990853 2690.4650886234413 2809.5117605776964 2462.9837841225344 2415.499472788081 2306.3564292280034 1.3140865160231523 1.313279955666825 1.2763479700249547 1.1534173825901413 1.1723546912666925 1.3009828615237964 1.1665434945473752 1.2181602656784978 1.0679111662489038 1.0473227130797864 1.0 11.171399772041797 -8.51186802654202 0.3654539217082401 0.9819666733757116 1.3022528709735621 0.721595221468389 0.05611178272171534 0.3753481316145586 0.1370490775300928 0.03420761356279565 0.03919164072340401 3.0770317214433085e-09 8.51186802654202 0.3202861975978505 LPS(ph)LGNK ddPTM_A549_PD325901_60min_R1 2 LPSLGNK 7 0 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 LPS(1)LGNK;LPS(1)LGNK 54.776 0.041643 8962600.0 6518.200000000001 6604.6 7553.9 7658.6 9915.2 8695.7 7714.799999999999 8697.2 9131.0 8847.3 8840.099999999999 True False 7179.9228655547795 7161.192820845713 8066.5530792908085 8131.65432805742 9218.790557583052 8624.88510225015 8008.390935700541 8523.727523178593 8747.255823907843 8288.679968110331 7752.823742010987 0.9261042304687293 0.9236883307485316 1.040466460701252 1.048863562316479 1.18908811348674 1.1124830628502023 1.0329644013838064 1.099435226031289 1.1282670824190455 1.0691175556069523 1.0 12.920506150742408 -5.84178561198561 2.81285795653541 1.0744547639922797 0.9193417368539082 0.6044128738937489 0.048841843819465665 0.1735495232278623 2.705204251542387 0.008562636622897793 0.03567839195617683 1.439509011685456e-06 5.84178561198561 -0.1551130271383715 LPS(ph)LGNKEPPGQEK ddPTM_A549_MK2206_60min_R1 2 LPSLGNKEPPGQEK 14 1 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 LPS(1)LGNKEPPGQEK;LPS(1)LGNKEPPGQEK 106.93 5.1043e-06 178284000.0 9776.6 11197.400000000001 10952.1 9186.400000000001 13981.3 11031.0 10228.5 10387.400000000001 14906.6 14859.0 13148.7 True False 11426.651065078768 11767.29983203765 12505.272465493468 11437.068412393166 11924.669290916114 12198.293098214814 12086.88605015147 11859.845760078353 11530.278900948735 11502.341579976312 9883.514904341244 1.1561323249545277 1.1905986833559559 1.2652657062317618 1.15718633735955 1.206521101686032 1.2342059698677466 1.2229339629813696 1.1999623489077782 1.1666172422003598 1.1637905837450615 1.0 13.270808487733113 -10.223164999758387 0.5939022665911049 0.9915976936303621 1.2080321718283513 0.2674108985568755 0.05605029506742032 0.23490591353313026 0.14995744235542297 0.025059918190125225 0.007264363628797772 5.981842861292427e-11 10.223164999758387 0.21643447819798922 LPS(ph)LGNKEPPGQEK ddPTM_A549_PD325901_60min_R1 3 LPSLGNKEPPGQEK 14 1 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 LPS(1)LGNKEPPGQEK;LPS(1)LGNKEPPGQEK;LPS(1)LGNKEPPGQEK 138.07 6.641e-10 258830800.0 17040.6 17487.899999999998 17980.2 17828.5 23129.2 19539.600000000002 22798.899999999998 21240.5 22857.899999999998 23746.9 26850.5 True False 18770.549167373316 18961.66670679038 19200.44449572599 18929.72595353872 21504.68478340829 19380.47597593374 23666.524615536793 20816.841564650098 21897.26195348844 22247.516681328703 23548.05871934325 0.7971166282150677 0.8052326916959215 0.8153727118046479 0.8038762846293201 0.9132253762278733 0.8230179908636756 1.0050308136906516 0.8840151883751831 0.9298966940107557 0.9447707323344563 1.0 14.523320509815708 -5.927757120305084 0.17338589689987716 1.026524576220396 0.6157577712684641 0.6455365885356963 0.04518490414644765 4.745849297600994 0.17616732915704958 0.07104143411811932 0.44484818677130294 1.1809809159562347e-06 5.927757120305084 -0.41076680495193196 LPS(ph)PAPAR ddPTM_A549_MK2206_60min_R1 2 LPSPAPAR 8 0 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 LPS(1)PAPAR;LPS(1)PAPAR 90.696 0.0026288 92160000.0 11556.7 11748.2 10725.1 9379.8 15828.5 11936.4 11226.2 11142.900000000001 16072.400000000001 14827.5 15699.4 True False 13507.188425812228 12346.133199380629 12246.080452120044 11677.851421075218 13500.148617887153 13199.50192525894 13265.855225713485 12722.44019870006 12432.027062348798 11477.957451854018 11800.805698602513 1.1445988325535934 1.0462110397125424 1.0377325722404074 0.9895808573865549 1.1440022793940148 1.11852548566426 1.1241482627990789 1.0780992860688055 1.0534896836595689 0.9726418470912771 1.0 13.52659774233121 -9.636320121285733 0.9033508678410169 1.0086099328159892 1.0826219226218898 0.3680863823340479 0.04720017276577208 0.47158990633742714 0.8085918513749768 0.01564933698095429 0.009982639607725215 2.3103611801373792e-10 9.636320121285733 0.07401198980590062 LPS(ph)PAPAR ddPTM_A549_PD325901_60min_R1 2 LPSPAPAR 8 0 Q8IY33;Q8IY33-4;Q8IY33-2 Q8IY33 MICALL2 MICAL-like protein 2 1 LPS(1)PAPAR;LPS(1)PAPAR 92.445 0.002585 166212000.0 8762.5 8904.5 9573.7 10120.900000000001 11092.099999999999 10467.8 9972.8 9554.0 10907.3 11297.1 10968.900000000001 True False 9652.062549388444 9654.913465345468 10223.428853334888 10746.045006768381 10313.029161667635 10382.553707388028 10352.32036132555 9363.437975031993 10448.904112157485 10583.799178024849 9619.794837586047 1.0033543035321628 1.0036506628626014 1.0627491569144851 1.117076319006503 1.0720633169195057 1.079290554807028 1.0761477283151 0.9733511091575022 1.0861878333758197 1.100210488551407 1.0 13.231790410470976 -5.751395120193405 24.140782855272775 1.0501890758991024 1.003502433819865 0.18626570955636212 0.04139829029509079 204.04956016937183 490403.9062446855 0.006139483595023307 0.02318778353991094 1.772576061138524e-06 5.751395120193405 -0.04668664207923734 LPS(ph)PDVRQDDGEDTLFSEPK ddPTM_A549_PD325901_60min_R1 2 LPSPDVRQDDGEDTLFSEPK 20 1 E5RFY9;Q9H425-2;Q9H425-3;Q9H425 E5RFY9 C1orf198 Uncharacterized protein C1orf198 1 LPS(1)PDVRQDDGEDTLFSEPK;LPS(1)PDVRQDDGEDTLFSEPK 110.94 1.1127e-10 7214800.0 2142.38 2993.8 2584.9 2733.2 2881.2 3453.8 2938.1 2882.2 2556.3 2739.4 3240.8 True False 2359.872840463201 3246.098032742012 2760.3268582664323 2902.0235564524246 2678.8344516004017 3425.67339790374 3049.9110032900116 2824.71225995784 2448.86760077271 2566.43381649107 2842.202145123836 0.83029732579432 1.1421066718674853 0.9711930106738286 1.0210475568851498 0.9425207338599358 1.2052884429001378 1.0730802552248182 0.9938463612815147 0.8616092296510499 0.9029737103302514 1.0 11.472793451275349 -8.530900045402937 23.6247243026036 0.9342845246015298 1.032345899453878 0.17327199761990364 0.09860663004224837 127.3539119738593 375086.1109576737 0.016725897540910868 0.018985426144145424 2.9450993821031582e-09 8.530900045402937 0.09806137485234812 LPS(ph)PGLHGQR ddPTM_A549_MK2206_60min_R1 2 LPSPGLHGQR 10 0 P10070;P10070-4;P10070-3;P10070-2;P10070-1 P10070 GLI2 Zinc finger protein GLI2 1 LPS(1)PGLHGQR;LPS(1)PGLHGQR 92.11200000000001 0.00019271 33424000.0 1664.4299999999998 1596.5500000000002 1260.26 1457.68 1928.8600000000001 1741.1999999999998 1325.99 1372.26 2518.4 1832.92 2057.9 True False 1945.3450925934426 1677.8075755835916 1438.9838183875966 1814.8116654377409 1645.1272491453908 1925.4526282849831 1566.905219107429 1566.7820573699967 1947.9864210584099 1418.8620989817741 1546.8666348493657 1.257603628371544 1.0846491467229669 0.9302571960430999 1.173217926194696 1.0635223567968377 1.2447437839219309 1.012954306342004 1.012874686202389 1.2593111630778082 0.9172491454765545 1.0 10.595133102951657 LPS(ph)PGLHGQR ddPTM_A549_PD325901_60min_R1 2 LPSPGLHGQR 10 0 P10070;P10070-4;P10070-3;P10070-2;P10070-1 P10070 GLI2 Zinc finger protein GLI2 1 LPS(1)PGLHGQR;LPS(1)PGLHGQR 96.745 0.0001629 46565000.0 1216.3 1125.25 1642.06 1597.33 1218.03 1586.58 1436.42 1586.0100000000002 1636.42 1504.1 1553.77 True False 1339.7778806072652 1220.078766565218 1753.5000661089334 1695.993446300362 1132.4797747753832 1573.659418508922 1491.0837491391842 1554.3757863492242 1567.64695820384 1409.1308693086887 1362.6661401595475 0.9832033255412053 0.8953614760122868 1.2868156142073255 1.2446140667308185 0.831076476768394 1.1548385713353606 1.0942399647243022 1.1406871724039687 1.1504262944555828 1.0340983956229373 1.0 10.412216422787877 LPS(ph)PTPENKDLFFVTR ddPTM_A549_PD325901_60min_R1 1 LPSPTPENKDLFFVTR 16 1 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 LPS(0.5)PT(0.5)PENKDLFFVT(0.001)R 42.908 0.020181 3522600.0 1652.8 1675.3 1974.7 1895.2 2334.1 2464.9 2089.1 2132.0 2447.7 2175.5 2092.2 True False 1820.5910392729472 1816.483410465861 2108.7150168357484 2012.2621996885098 2170.1608682078627 2444.8266716349917 2168.601843699384 2089.4755874783564 2344.831681106036 2038.1385587268464 1834.8726635485343 0.9922165583697959 0.9899779132100046 1.149243246535495 1.09667675564849 1.1827310479468918 1.3324230722947514 1.1818813843492755 1.1387578162712584 1.2779261077285173 1.1107792923271351 1.0 10.841464231086773 -5.7646718505802115 7.896519784408187 1.153082863407061 0.9904712275698007 0.3788426465418522 0.08425053634327458 0.12062907219978584 57.284802748433066 0.01557489109323266 0.053563330497363705 1.7192069154438457e-06 5.7646718505802115 -0.16261163583726024 LPS(ph)PTSPFSSLSQDQAATSK ddPTM_A549_MK2206_60min_R1 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 LPS(0.884)PT(0.107)S(0.009)PFSSLSQDQAATSK 126.0 3.8558e-15 3570100.0 751.4 685.08 741.16 721.72 829.18 653.54 768.98 1070.0 1013.8 764.2 915.53 True False 878.2179500337734 719.9476457867314 846.2676327393957 898.5414323992419 707.2087204081042 722.697169015258 908.6937121616538 1221.67577673757 784.1759187059314 591.5666892400496 688.1786336574372 1.2761482369284576 1.0461639036371306 1.2297208767464471 1.3056805144091692 1.027652829977485 1.0501592663148613 1.3204329046547891 1.7752306116288086 1.1394947188905022 0.8596121127679776 1.0 9.426639290226579 -9.236577771853609 3.1918265560997163 1.0509603426824314 1.244799981733106 0.22377675965757726 0.2050737751888716 0.3192671448879608 6.649478711440437 0.04010609482640524 0.03755754473809791 5.799923003410352e-10 9.236577771853609 0.19383963905067447 LPS(ph)PTSPFSSLSQDQAATSK ddPTM_A549_PD325901_60min_R1 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 LPS(0.881)PT(0.105)S(0.013)PFS(0.001)SLSQDQAATSK 120.29 2.2948e-14 4582900.0 980.91 877.83 659.68 861.0 1577.6 944.54 854.06 1024.4 867.0 881.51 852.26 True False 1080.4912610922236 951.8078148446533 704.4498517780963 914.1820145271246 1466.7948184245415 936.8479794012388 886.5617206595648 1003.9675383737467 830.5630050737151 825.8513081605618 747.437422921267 1.4455942771359465 1.273428096662099 0.9424867288887423 1.2230883636440855 1.9624316008847336 1.2534132633333825 1.1861350441814216 1.3432128330554596 1.1112141024830708 1.1049103012969619 1.0 9.545808988590137 -8.89905085471071 1.1096503096342143 1.030865556848486 1.3356768177334704 0.18490873419881815 0.23674729434844932 0.4904627413376808 1.2184849680986238 0.053988758859310156 0.05366581564389632 1.261679786645443e-09 8.89905085471071 0.30481126088498445 LPS(ph)SPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 LPSSPVYEDAASFK 14 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 LPS(0.557)S(0.443)PVYEDAASFK 71.781 0.00053087 6762100.0 731.58 985.75 763.41 537.59 1138.5 893.36 888.02 997.48 1213.2 1145.4 1150.2 True False 855.0528185862496 1035.920464521327 871.6730173101378 669.2995741333324 971.0281581618303 987.8947622356255 1049.3617392829356 1138.8758446543845 938.4121370823003 886.6533444851519 864.5735960949216 0.9889878923533229 1.19818656179224 1.0082114712353958 0.7741383465287435 1.1231295549016755 1.1426381359524707 1.2137332715487255 1.3172688245378097 1.085404575528203 1.0255383098558173 1.0 9.75584496706269 -4.962174834357623 16.659776683308856 1.0702348616242916 0.6423687123347901 0.026652336801649357 0.13641853315486163 12118094.703684013 142303131.10816365 0.019298727966041644 156840217.43263912 1.0910010426661805e-05 4.962174834357623 -0.4278661492895015 LPS(ph)SPVYEDAASFK ddPTM_A549_PD325901_60min_R1 3 LPSSPVYEDAASFK 14 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 LPS(0.5)S(0.5)PVYEDAASFK;LPS(0.527)S(0.467)PVY(0.006)EDAASFK;LPS(0.497)S(0.497)PVY(0.005)EDAASFK 57.52 0.0036643 7736100.0 898.46 1202.8600000000001 1198.87 1315.47 1279.74 1473.91 1113.0700000000002 1064.94 1352.54 1376.25 1799.01 True False 989.670997788706 1304.229233637537 1280.2325275909623 1396.7235942508667 1189.855477263327 1461.9069656333036 1155.4284879452753 1043.6989362707322 1295.6974473845487 1289.3533401277055 1577.7431748639935 0.6272700231290931 0.8266422916074193 0.8114327781524533 0.8852667636298085 0.7541502927850702 0.9265810741087975 0.7323298914253753 0.6615138337459152 0.8212347028509516 0.8172137016145558 1.0 10.623646667133155 -10.211505085259398 0.8185928966949555 0.9918116230033015 0.787545637212862 0.10631694605571218 0.09882405102537559 0.3925255835949062 0.5111598535878671 0.04328394060757278 0.016668760317333924 6.144618367809933e-11 10.211505085259398 -0.20426598579043953 LPS(ph)TSGSEGVPFR ddPTM_A549_MK2206_60min_R1 1 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.477)T(0.477)S(0.047)GSEGVPFR 177.12 4.1780000000000006e-22 40623000.0 8056.6 7682.5 6541.8 5513.1 8203.3 5020.2 4095.9 5384.1 7790.8 7917.4 7589.1 True False 9416.357115041386 8073.5064353893995 7469.5256083093755 6863.8097474924625 6996.605436845796 5551.4342318609415 4840.072011811642 6147.3126631147215 6026.196239351124 6128.85384112689 5704.517021495369 1.6506843751292735 1.41528308268121 1.309405437859721 1.2032236421819282 1.226502683834875 0.9731646361896036 0.8484630677011946 1.0776219336274817 1.0563902634778064 1.0743861080670922 1.0 12.477889029162041 -5.558848224781824 0.6346769692394956 1.0144648956244102 1.8839004510138604 0.8665170588824355 0.07916484348659428 0.6054963212414143 0.20611379958325798 0.013951647946641988 0.3527054311512666 2.761542778744764e-06 5.558848224781824 0.8694355553894502 LPS(ph)TSGSEGVPFR ddPTM_A549_PD325901_60min_R1 2 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.494)T(0.494)S(0.013)GSEGVPFR;LPS(0.965)T(0.029)S(0.006)GSEGVPFR 119.17 1.2549000000000001e-05 41876000.0 5403.8 5465.200000000001 5719.0 5341.6 5958.4 6079.5 5804.2 6369.3 8531.5 11875.5 12275.5 True False 5952.389797932696 5925.771584121069 6107.125731140751 5671.538500346217 5539.902539364092 6029.990567651803 6025.082007180108 6242.259314880812 8172.9507240904295 11125.678903314494 10765.69132080586 0.5529036288110045 0.5504311249077778 0.5672766893602152 0.5268160057111574 0.5145886477961367 0.5601117836249119 0.5596558388717673 0.5798289333093707 0.7591663628972272 1.0334384083456787 1.0 13.394153344950983 -9.352056868903341 0.6298907830052085 0.9772797552839481 0.5319933097950165 0.9569940750809935 0.03762217473875551 0.09027183046093426 0.0797918106635865 0.015611349368321547 0.010203888697738113 4.4457304882214355e-10 9.352056868903341 -0.4452864454889316 down LPS(ph)VENRPK ddPTM_A549_MK2206_60min_R1 1 LPSVENRPK 9 1 H9KVB4;O15417 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 LPS(1)VENRPK 48.74100000000001 0.008836 2245300.0 1403.9 1143.4 1181.8 1154.8 1122.1 1253.0 962.05 1015.9 1770.5 1325.3 1782.1 True False 1640.8439979403975 1201.5941761437334 1349.3970105934177 1437.7260518409412 957.0405764368815 1385.5916283259146 1136.8420320230935 1159.9069360632686 1369.4845769075273 1025.9138095391754 1339.555386542132 1.2249168749759562 0.8970097005436068 1.0073469332811167 1.0732860068983205 0.714446439506576 1.0343668072602943 0.8486711661528877 0.8658894941682107 1.0223426299995353 0.7658614342087214 1.0 10.387538518128837 -5.250161758009534 23.95790932417415 0.9729566231010681 1.2249171425771164 0.26492443800589305 0.12082456656903814 827.018335003245 1756837.357325425 0.013796379651642512 0.2813318366644678 5.621319136523655e-06 5.250161758009534 0.25196051947604825 LPSANQGS(ph)PFK ddPTM_A549_MK2206_60min_R1 4 LPSANQGSPFK 11 0 Q56NI9;E5RFE4;E5RFP7;E5RIE3 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 LPSANQGS(1)PFK;LPS(0.047)ANQGS(0.953)PFK;LPSANQGS(1)PFK;LPSANQGS(1)PFK 141.37 3.1726e-11 83246000.0 20095.3 22541.100000000002 23333.3 20513.2 27284.5 20702.7 20916.800000000003 19905.800000000003 29494.600000000002 29268.800000000003 31535.1 True False 23486.895357085003 23688.345709177458 26642.31280020258 25538.934920872536 23270.98619355859 22893.445972659963 24717.11180855534 22727.50810895581 22814.12019319782 22656.95775193557 23704.064345516403 0.9908383226915903 0.9993368801185389 1.123955470752084 1.0774074246766545 0.9817297934377347 0.9658025576947201 1.042737289617194 0.9588021605777785 0.9624560522893234 0.9558258626740991 1.0 14.53284682721303 -6.775754642235056 24.93032361069832 0.9834378081111559 1.049850472397591 0.38336694704941443 0.040675230828941 182.03786198125866 317022.52168263745 0.005928638778159819 0.011243141762891566 1.675889414301556e-07 6.775754642235056 0.06641266428643511 LPSANQGS(ph)PFK ddPTM_A549_PD325901_60min_R1 2 LPSANQGSPFK 11 0 Q56NI9;E5RFE4;E5RFP7;E5RIE3 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 LPSANQGS(1)PFK;LPSANQGS(1)PFK 170.95 4.350899999999999e-15 144923000.0 27679.0 25434.0 25367.0 25904.0 31918.0 28906.0 28157.0 29053.0 28011.0 28104.0 30495.0 True False 30488.95170379715 27577.41244063077 27088.557164162874 27504.031247747567 29676.189791122313 28670.59911975375 29228.530043101597 28473.515123362424 26833.795080876393 26329.508643741363 26744.308323732228 1.1400164601281544 1.0311507071640835 1.012871854312462 1.0284069011925494 1.1096263710356797 1.0720261961051423 1.092887865683366 1.0646570021067152 1.0033460112731634 0.9844901698346492 1.0 14.706944271929526 -8.760809269246574 6.447578149019791 1.0014712510100907 1.0668566225529954 0.4539976689356756 0.03547636316910057 0.10490523055637363 18.668444779361767 0.006065561288665426 0.006656138852195297 1.7345656062532859e-09 8.760809269246574 0.06538537154290469 LPSAQT(ph)PNGTDYVASGK ddPTM_A549_MK2206_60min_R1 2 LPSAQTPNGTDYVASGK 17 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPSAQT(0.998)PNGT(0.002)DYVASGK;LPS(0.029)AQT(0.966)PNGT(0.005)DYVASGK 126.63 7.4687e-11 6795900.0 2506.6 3074.0 2442.1 2988.0 3958.3 2714.2 2785.9 2555.6000000000004 5466.6 3948.7 4877.3 True False 2929.65279951378 3230.453469884413 2788.4265015824903 3720.060134136418 3376.039313528305 3001.414842459856 3292.0619687263006 2917.8641261967578 4228.423828366387 3056.6859275087477 3666.1318033679026 0.799112786076716 0.8811613011067272 0.7605909037478943 1.0147098723289147 0.9208723239101487 0.8186871076764337 0.8979660703147766 0.7958972242940784 1.1533747435053845 0.8337632391450613 1.0 11.840042938692386 -8.759511244580303 24.999296942981598 1.0724269649483258 0.8653660065391695 0.15565822264656193 0.10349685518194711 26.70853348566132 346289.854026392 0.014181130121336413 0.015684947102777434 1.7397576523407192e-09 8.759511244580303 -0.20706095840915628 LPSAQT(ph)PNGTDYVASGK ddPTM_A549_PD325901_60min_R1 2 LPSAQTPNGTDYVASGK 17 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 LPSAQT(1)PNGTDYVASGK;LPS(0.1)AQT(0.9)PNGTDYVASGK 145.55 2.5796e-16 10657100.0 3130.5 3088.4 3674.8999999999996 3898.1 4130.4 3813.2 3647.1 4005.3999999999996 3735.9 3701.7000000000003 3997.3999999999996 True False 3448.3060554477056 3348.6703067407425 3924.300812968904 4138.876783772573 3840.2949531064455 3782.14656346243 3785.8923862696984 3925.509154824485 3578.8931149422074 3467.9740302639275 3505.745141606401 0.9836157268031254 0.9551950217368956 1.1193913574592342 1.180598308374481 1.0954290166531464 1.078842417429516 1.0799108986384927 1.1197360322164605 1.020865171420387 0.9892259391893029 1.0 11.775505404460326 -8.904091906465105 6.855908574388606 1.009114916802577 1.0781759593193747 0.23184143043530103 0.05937284074050272 0.2656201394460197 16.255888086154766 0.011086508056957512 0.011751612193908915 1.2471195678089422e-09 8.904091906465105 0.06906104251679768 LPSDEDES(ph)GTEESDNTPLLK ddPTM_A549_PD325901_60min_R1 1 LPSDEDESGTEESDNTPLLK 20 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 LPSDEDES(0.873)GT(0.126)EESDNTPLLK 102.6 4.9711e-10 2741800.0 851.94 1218.7 949.91 1338.6 1058.8 1084.9 1077.9 1129.0 1081.0 1109.2 911.16 True False 938.4283216349204 1321.4041260280217 1014.376604872864 1421.282281818827 984.4335406617046 1076.064934097448 1118.9200743495132 1106.481209316634 1035.5693292787614 1039.164922702744 799.0930963191292 1.1743666988960515 1.6536297611815434 1.2694097966124316 1.7786191475883024 1.2319384877635797 1.3466077219965196 1.400237443551454 1.384671215923939 1.2959307670769715 1.3004303597283722 1.0 9.642219780254546 -10.115840157290174 0.3897844989751631 0.9289214318470673 1.4463778656814386 0.14472403183110494 0.18886942924126435 1.0144862857877586 0.2707103198301055 0.212093856741707 0.05552519905696889 7.65878437706488e-11 10.115840157290174 0.5174564338343712 LPSDEDES(ph)GTEESDNTPLLKDDKDR ddPTM_A549_MK2206_60min_R1 2 LPSDEDESGTEESDNTPLLKDDKDR 25 2 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 LPSDEDES(0.997)GT(0.003)EESDNTPLLKDDKDR;LPSDEDES(1)GTEESDNTPLLKDDKDR 245.25 3.242199999999999e-112 33136000.0 6605.0 7751.7 6447.0 6974.799999999999 9340.1 7731.6 7541.9 7687.3 9349.8 9668.099999999999 11045.7 True False 7719.762523254021 8146.228419812296 7361.281542812465 8683.62631311067 7966.183662755656 8549.752780179291 8912.165606065148 8776.9983163689 7232.085228562547 7484.069495212934 8302.747844188552 0.9297840507895724 0.9811484791163674 0.8866078653665173 1.0458737849287703 0.9594635188555711 1.0297497817139694 1.0733995266763585 1.0571197007400743 0.8710471959743535 0.9013966984979983 1.0 13.019373168724897 -4.363121460947543 16.245758516018856 0.964730181018989 0.9768567907346777 0.0 0.06928852801521727 0.0 0.0 0.010002269550394715 0.0 4.3338965354616514e-05 4.363121460947543 0.012126609715688685 LPSDEDES(ph)GTEESDNTPLLKDDKDR ddPTM_A549_PD325901_60min_R1 4 LPSDEDESGTEESDNTPLLKDDKDR 25 2 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 LPSDEDES(0.999)GT(0.001)EESDNTPLLKDDKDR;LPSDEDES(0.995)GT(0.005)EESDNTPLLKDDKDR;LPSDEDES(1)GTEESDNTPLLKDDKDR;LPSDEDES(0.981)GT(0.019)EESDNTPLLKDDKDR 251.16 1.7894999999999996e-124 70038000.0 12590.399999999998 11161.6 12775.2 11644.8 12720.0 12611.9 12722.8 13572.6 12945.900000000001 14132.7 14951.4 True False 13868.568139437388 12102.227203638602 13642.201895518334 12364.072848740372 11826.591081617766 12509.192867862123 13206.973116183299 13301.88384550128 12401.82884357995 13240.358910098334 13112.472584733563 1.0576623172950708 0.9229553865934365 1.04039888795661 0.9429245909833567 0.901934475377824 0.9539919177734777 1.0072069192777386 1.014445121585096 0.9458039865051087 1.009753028998792 1.0 13.678652136000398 -4.080435674174629 0.0010686851458170884 1.9395855156196051 1.286944055462879e-05 0.0 0.04842992712700508 3285337.204716221 413.6910835970706 371611.97127050534 379235.83654318884 8.309297833231579e-05 4.080435674174629 -1.9395726461790506 LPSGS(ph)GAAS(ph)PTGSAVDIR ddPTM_A549_MK2206_60min_R1 2 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(0.095)GS(0.904)GAAS(0.605)PT(0.368)GS(0.028)AVDIR;LPS(0.109)GS(0.89)GAAS(0.789)PT(0.192)GS(0.02)AVDIR 73.432 0.00066134 36850000.0 5557.4 5527.299999999999 4526.8 5521.700000000001 7797.4 5679.5 5582.2 5723.3 8044.0 7810.7 7393.7 True False 6495.3532546149745 5808.615960992879 5168.768308981459 6874.516747878536 6650.412789153318 6280.500920253022 6596.413482832818 6534.59530187115 6222.046843628437 6046.25744523326 5557.640234261021 1.1687250309174857 1.0451586853687787 0.9300293094032438 1.2369488592477442 1.1966252777852935 1.1300661171868958 1.186909048586503 1.175785949869069 1.1195483301116846 1.0879181073938675 1.0 12.440256731462789 -10.335724721069765 0.8621107014903958 1.004785346841354 1.1304920441208346 0.11481805371168718 0.08346476044474259 0.6247460541216199 0.8855126639373103 0.0448801115025928 0.016032709622306966 4.6161007485464506e-11 10.335724721069765 0.1257066972794807 LPSGS(ph)GAAS(ph)PTGSAVDIR ddPTM_A549_PD325901_60min_R1 2 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(0.356)GS(0.645)GAAS(0.809)PT(0.18)GS(0.01)AVDIR;LPS(0.227)GS(0.771)GAAS(0.741)PT(0.206)GS(0.055)AVDIR 133.56 1.3068e-12 104354000.0 9358.2 10032.0 9041.5 10089.3 10917.599999999999 8934.3 10606.8 10263.9 9575.7 10395.9 10775.2 True False 10308.237574857281 10877.431847307065 9655.110560956311 10712.493146537192 10150.785439675316 8861.542022957725 11010.447578263662 10059.178462626214 9173.26662939375 9739.50109982461 9449.918709620579 1.090828174464917 1.1510608907390063 1.021713610205645 1.1336069098278314 1.0741664295314215 0.937737381162459 1.1651367505473218 1.0644724861374069 0.9707243957617137 1.030643902778679 1.0 13.20608620365382 -8.693255053688404 5.690483515506444 0.9862163949642947 1.0807109859928137 0.24280640693022026 0.06138727150761887 0.16319291208473732 9.74947259127376 0.00975461121174228 0.011012810900167407 2.0264922459005797e-09 8.693255053688404 0.09449459102851898 LPSGS(ph)PSPK ddPTM_A549_PD325901_60min_R1 2 LPSGSPSPK 9 0 A0A075B784;Q9P275;E9PEW0 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LPS(0.001)GS(0.974)PS(0.025)PK;LPS(0.014)GS(0.978)PS(0.008)PK 96.171 0.00089888 9806200.0 4954.0 5535.9 5324.1 5506.700000000001 6566.4 6222.5 5491.4 6153.6 5878.5 5930.1 6819.200000000001 True False 5456.926433057956 6002.429721242741 5685.425442414144 5846.836352376909 6105.1987168502255 6171.826023063303 5700.378232009381 6030.861620594184 5631.447088034411 5555.672473962801 5980.481630470399 0.912456014454598 1.003669953714182 0.9506634738993341 0.9776530911135032 1.0208540204762768 1.0319948131966512 0.9531637390149484 1.0084240690360289 0.9416377201699497 0.9289674004944339 1.0 12.546045959371616 -5.248431192638699 24.161161285354698 0.9801797130089459 0.912455944538376 0.2687622093426958 0.03274866364670423 1408.7805429848522 2616569.400309329 0.004344817571321209 0.10885870981599362 5.643763511189156e-06 5.248431192638699 -0.06772376847056993 LPSGSGAAS(ph)PTGSAVDIR ddPTM_A549_MK2206_60min_R1 3 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPSGSGAAS(0.903)PT(0.096)GS(0.002)AVDIR;LPSGSGAAS(0.73)PT(0.27)GSAVDIR;LPS(0.004)GS(0.004)GAAS(0.514)PT(0.335)GS(0.144)AVDIR 256.71 8.767399999999998e-87 1020207100.0 10839.8 12777.0 12587.9 10683.8 16632.9 12581.599999999999 11868.7 12284.92 17427.4 17935.0 17191.1 True False 12669.293232334436 13427.294725020534 14373.053502833716 13301.331479613998 14186.222443469394 13912.976561009842 14025.089159058774 14026.34503098962 13480.12172583916 13883.471043601528 12922.075419776924 0.9804379575856979 1.0390973809416393 1.1122867678698196 1.0293494696104801 1.0978284820840563 1.0766828167336315 1.0853588687149833 1.0854560568128737 1.0431855013946258 1.0743994747432917 1.0 13.657550180026906 -9.723633586392637 0.9644509510507367 1.0068488461272034 1.0644690918606416 0.0 0.04079544681294125 0.4206421996788309 0.8116402666343002 0.011325346964058318 0.007056085687390691 1.889584916735559e-10 9.723633586392637 0.05762024573343827 LPSGSGAAS(ph)PTGSAVDIR ddPTM_A549_PD325901_60min_R1 4 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPSGSGAAS(0.977)PT(0.023)GSAVDIR;LPSGSGAAS(0.973)PT(0.026)GS(0.002)AVDIR;LPSGSGAAS(0.996)PT(0.004)GSAVDIR;LPSGSGAAS(0.475)PT(0.475)GS(0.049)AVDIR 300.29 6.480699999999998e-134 1051675500.0 20008.6 20409.2 21246.399999999998 20403.5 23660.299999999996 21332.5 21978.600000000002 22210.399999999998 22089.7 21830.2 21844.9 True False 22039.8583424472 22129.15491009364 22688.308468982133 21663.77785528943 21998.482151603825 21158.77519276783 22815.007650151416 21767.39614827828 21161.346728000994 20451.83744643475 19158.115786230457 1.1504188923572507 1.1550799231518667 1.184266173257442 1.1307885439788328 1.1482591710514052 1.1044288190373768 1.1908795157480614 1.1361971287345072 1.1045630459760725 1.0675286481530784 1.0 14.225668057558172 -9.987534352007918 0.47040264452851704 0.9877571450791418 1.157037537482076 0.6693066962140766 0.02996714715632863 0.29322024730322177 0.1239604799438242 0.02156681244672486 0.006843902555795766 1.0291191222770207e-10 9.987534352007918 0.16928039240293424 LPSGSGAASPT(ph)GSAVDIR ddPTM_A549_PD325901_60min_R1 1 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPSGS(0.001)GAAS(0.411)PT(0.585)GS(0.004)AVDIR 199.84 1.2217999999999998e-48 699590000.0 6347.1 5852.3 7027.3 6428.3 6869.2 5948.4 6948.2 6442.6 6528.5 6723.9 6846.2 True False 6991.452919511939 6345.493859648636 7504.21483658776 6825.361491271444 6386.731089453517 5899.958202585732 7212.61755320093 6314.097288878075 6254.129848470303 6299.351806492045 6004.160801637499 1.164434656314531 1.0568494198086844 1.249835752990019 1.1367719347906173 1.0637175286364215 0.9826449353216274 1.201269884583013 1.051620284246226 1.0416326369481361 1.049164406918289 1.0 12.551746899964867 -7.854334936286838 0.2711055988741029 0.9888755229481679 1.1777870774104886 0.2693608979960739 0.06941619108753233 1.7255661968962768 0.32778329968999675 0.058620146122066036 0.11443131447756781 1.3985083499315114e-08 7.854334936286838 0.18891155446232066 LPSPEPS(ph)MSPK ddPTM_A549_MK2206_60min_R1 1 LPSPEPSMSPK 11 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 LPS(0.001)PEPS(0.6)MS(0.399)PK 59.57 0.0026477 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LPSPEPS(ph)MSPK ddPTM_A549_PD325901_60min_R1 1 LPSPEPSMSPK 11 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 LPS(0.002)PEPS(0.646)MS(0.352)PK 50.354 0.0094596 9941600.0 3356.8 3581.8 3122.7 3157.9 4281.5 3936.5 3779.8 3936.4 3776.7 4491.6 4634.0 True False 3697.579864854447 3883.6508563281936 3334.6252003205523 3352.956310888741 3980.7822103731473 3904.442449142416 3923.642357385922 3857.8854139539394 3617.978432828027 4207.999609458747 4064.047377346288 0.9098269585796182 0.95561160974066 0.8205182889619685 0.8250288442941651 0.9795117627227292 0.9607275916384396 0.9654519234340111 0.949271761805354 0.8902402203761877 1.0354209040265805 1.0 11.988701505341096 -6.774531445036411 24.998829613962954 0.9512435460770562 0.8792204914474184 0.4079945292981302 0.04994022393277198 219.18193553491054 418520.1947875065 0.007663345711252263 0.014545120931838785 1.6806162364997107e-07 6.774531445036411 -0.07202305462963776 LPSPEPSMS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LPSPEPSMSPK 11 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 LPS(0.033)PEPS(0.274)MS(0.693)PK;LPSPEPS(0.286)MS(0.714)PK 81.565 0.00077416 4450400.0 3822.7 3922.4 3790.6 3120.8 5119.9 3550.0 2965.5 3449.9 5698.3 5289.3 5962.1 True False 4467.878303958083 4122.033406075023 4328.1640788250215 3885.3961400980347 4366.7694922905175 3925.6586437007163 3504.292963946244 3938.933889875645 4407.644148315255 4094.4434564216085 4481.546024411001 0.9969502220040874 0.9197793314231939 0.9657747695213867 0.86697673502275 0.9743890765607907 0.8759608006517475 0.7819384080534585 0.878923003003931 0.9835097362175459 0.9136229850411347 1.0 12.12978079752142 -8.827053816064714 6.741634590536417 0.9925774942994909 0.9056343429135137 0.11114220521914464 0.06150737846596009 0.18813919775243257 15.400844010269509 0.01017567368722733 0.01082374690655159 1.4891765333760168e-09 8.827053816064714 -0.08694315138597719 LPSPEPSMS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LPSPEPSMSPK 11 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 LPSPEPS(0.029)MS(0.971)PK;LPSPEPS(0.003)MS(0.997)PK 120.87 4.1178e-10 4162700.0 4062.5 4333.9 5156.4 4301.9 4842.9 5014.8 4506.4 5538.8 5208.3 4982.4 5434.2 True False 4474.922009345566 4699.132962823371 5506.344311952121 4567.618592676235 4502.751411098007 4973.961131451644 4677.893517996701 5428.324288895458 4989.4132633511335 4667.810413698295 4765.827850232027 0.9389600610789376 0.9860056029079167 1.1553804470054538 0.9584103195111963 0.9447994246957091 1.0436720099341155 0.981548991067513 1.1390097291556969 1.0469142864881746 0.9794332821885372 1.0 12.21851112454485 LPSPT(ph)SPFSSLSQDQAATSK ddPTM_A549_MK2206_60min_R1 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 LPS(0.357)PT(0.552)S(0.091)PFSSLSQDQAATSK 116.29 3.8480000000000004e-14 3496700.0 529.28 823.37 821.2 371.87 918.9 705.92 804.53 538.74 984.24 819.59 656.9 True False 618.6095243463874 865.2760161023846 937.6585082918554 462.97816669387856 783.7310272594697 780.6199858482278 950.7026869949997 615.1080448220542 761.3112115083111 634.4440497700238 493.77360048231134 1.252820166453083 1.7523739933791411 1.8989644391193925 0.9376324822583625 1.5872274793426215 1.5809269371342023 1.9253817661907526 1.2457289013046162 1.5418224278589876 1.2848885585424321 1.0 8.947705894883658 -10.688031160182936 0.6100533323557992 0.9294609257269346 1.5442624300957564 0.18122750050804126 0.2907836930274754 0.9878761443217987 0.5376329961453952 0.33242725403462203 0.05749509397736131 2.0510150153258245e-11 10.688031160182936 0.6148015043688217 LPSPT(ph)SPFSSLSQDQAATSK ddPTM_A549_PD325901_60min_R1 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 LPS(0.346)PT(0.566)S(0.088)PFSSLSQDQAATSK 142.3 8.4254e-21 6075600.0 1863.7 1321.7 1301.5 1596.0 2038.2 1305.6 1615.3 1382.0 1753.8 1848.3 1765.6 True False 2052.901452016575 1433.0842975065539 1389.827616555288 1694.5812952210108 1895.0438634082795 1294.9676264703005 1676.7711254260753 1354.4349258419736 1680.0938850037849 1731.5980225671485 1548.442393060555 1.3257848410872668 0.9255005571592549 0.8975649483531906 1.0943780038672324 1.2238387891606697 0.8363033925406472 1.0828760133025508 0.8747079852062701 1.0850218855627012 1.1182837865505473 1.0 10.596601995868527 -5.249838518154342 24.284889390154035 1.021024565380183 1.3257851134192942 0.3787770910539332 0.11450865925801143 911.4787639887012 1908008.8571025229 0.014258205143424137 0.31045866638685776 5.625504570198255e-06 5.249838518154342 0.3047605480391111 LPSPTS(ph)PFSSLSQDQAATSK ddPTM_A549_PD325901_60min_R1 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDG6 E9PMS6 LMO7 LIM domain only protein 7 1 LPS(0.018)PT(0.166)S(0.812)PFS(0.003)S(0.001)LSQDQAATSK 117.26 3.5898000000000004e-17 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LPSS(ph)PASPSPK ddPTM_A549_MK2206_60min_R1 2 LPSSPASPSPK 11 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 LPS(0.001)S(0.999)PASPSPK;LPS(0.014)S(0.986)PASPSPK 174.24 2.9098e-15 20028600.0 5971.799999999999 6198.0 6226.0 6526.7 8075.9 6452.0 6468.3 7392.0 10107.2 9192.3 10499.0 True False 6979.693843507696 6513.45172620156 7108.940419660364 8125.7417929947005 6887.945808080041 7134.746357509021 7643.506382968641 8439.838637050576 7817.935337881814 7115.753045670383 7891.808542340971 0.8844226017471641 0.8253433533334876 0.9007999093641997 1.029642540033585 0.87279687173415 0.9040698743804826 0.9685367228512775 1.0694429029504866 0.9906392553667751 0.9016631621881206 1.0 12.946140240930639 -7.872053527062487 4.041944065463272 1.0016573040016385 0.9035850341486262 0.3276069684683406 0.05893067295690953 0.15763828366882313 4.763973246295724 0.008114060914758315 0.011411031128318795 1.3425994747274132e-08 7.872053527062487 -0.09807226985301232 LPSS(ph)PASPSPK ddPTM_A549_PD325901_60min_R1 4 LPSSPASPSPK 11 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 LPS(0.358)S(0.641)PAS(0.001)PSPK;LPS(0.027)S(0.973)PASPSPK;LPS(0.027)S(0.972)PAS(0.001)PSPK;LPS(0.023)S(0.977)PASPSPK 169.52 4.977399999999999e-15 37961100.0 17220.2 18867.9 16993.100000000002 17631.0 20132.6 17377.899999999998 16496.8 17992.3 19808.1 19605.5 20678.3 True False 18968.382027158776 20457.964149900818 18146.353953811493 18720.026827093778 18718.55562969951 17236.38014402438 17124.594751395332 17633.429461813696 18975.63444152325 18367.605384104434 18135.00019054375 1.0459543329395486 1.128092855525215 1.0006260691011 1.0322595329695714 1.0321784082175 0.9504483023392555 0.9442842333315619 0.9723423918687583 1.0463542455002475 1.0128263132680844 1.0 14.146489140015984 -5.776843253195813 24.98872265744955 1.0093717631686805 1.0870235970571314 0.4376803217002284 0.036977705971238166 167.10982927057887 271092.7637194731 0.0056383058353071756 0.017620002118702297 1.6716938579613405e-06 5.776843253195813 0.07765183388845087 LPSS(ph)PLGCR ddPTM_A549_MK2206_60min_R1 2 LPSSPLGCR 9 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 LPSS(1)PLGCR;LPS(0.012)S(0.988)PLGCR 163.88 4.3956e-06 44289000.0 3823.2 4289.0 4068.1 3367.9 4369.8 4317.0 3532.4 4048.8 5513.2 5146.6 6063.4 True False 4468.462691734257 4507.291780199819 4645.017751561248 4193.035651190777 3727.0082086390594 4773.822074607323 4174.191355873785 4622.729798929971 4264.469002771294 3983.979485531065 4557.69043867323 0.9804225960188405 0.9889420619606446 1.0191604309382274 0.9199913218352305 0.8177405330152288 1.0474213066557039 0.915856706821211 1.01427024523317 0.9356644686936451 0.8741224396738152 1.0 12.154087223798555 -8.25750638726394 24.85370497882102 0.9721192784406083 0.9562254084508847 0.0 0.06710938634095637 1561.414431039225 9867005.820570063 0.009870128911325658 0.012521836352746856 5.527052791272245e-09 8.25750638726394 -0.01589386998972364 LPSS(ph)PLGCR ddPTM_A549_PD325901_60min_R1 2 LPSSPLGCR 9 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 LPS(0.005)S(0.995)PLGCR;LPS(0.123)S(0.877)PLGCR 159.34 9.695599999999999e-06 67372000.0 5964.1 6106.700000000001 6106.1 5431.3 6019.2 5248.6 5842.3 6579.0 4604.3 4952.1 6337.700000000001 True False 6569.571041461639 6621.333040465517 6520.496664962155 5766.77906562273 5596.432157112704 5205.857141767787 6064.631923529231 6447.776683874341 4410.797282884557 4639.423560869325 5558.203077990417 1.1819595198808182 1.1912722416863324 1.1731303396923844 1.0375257947048102 1.006877956524055 0.936607941221532 1.0911137715612065 1.1600469780254146 0.7935653341545937 0.8346984620336544 1.0 12.440402831373534 -6.422080020360287 0.47832172783222815 0.9189417878204498 1.2656028859147377 0.47083628661503285 0.09659379291262786 1.3321251654361241 0.38762059328927706 0.026315212851315606 0.2147361692586442 3.783728616984445e-07 6.422080020360287 0.3466610980942879 LPSS(ph)PVYEDAASFK ddPTM_A549_MK2206_60min_R1 2 LPSSPVYEDAASFK 14 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 LPS(0.005)S(0.995)PVYEDAASFK;LPSS(1)PVYEDAASFK 264.58 1.7847999999999994e-83 833130000.0 26577.0 27765.0 26055.0 25790.0 35735.0 30315.0 28954.0 30517.0 37983.0 30891.0 32635.0 True False 31062.547854734617 29178.119906096537 29749.990786098766 32108.55115775708 30478.428837868236 33522.913178531606 34214.56701335345 34842.8782043929 29379.91114638725 23912.701645268753 24530.828819820697 1.2662657296616227 1.1894469657103828 1.2127592999247148 1.3089060868507487 1.2424540997669808 1.3665625986287664 1.3947578887227967 1.4203710139724328 1.1976729918986078 0.9748020264993043 1.0 14.58230835841214 -9.73954946157779 0.9905930318227958 1.0317593077776241 1.2932829500150729 0.6889525850918536 0.0771638910915191 0.22046251042016715 0.4471868432953948 0.027221417970846422 0.01700708084784798 1.8215896013638946e-10 9.73954946157779 0.26152364223744873 LPSS(ph)PVYEDAASFK ddPTM_A549_PD325901_60min_R1 5 LPSSPVYEDAASFK 14 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 LPS(0.001)S(0.999)PVYEDAASFK;LPS(0.001)S(0.999)PVYEDAASFK;LPS(0.005)S(0.995)PVYEDAASFK;LPS(0.005)S(0.995)PVYEDAASFK;LPS(0.316)S(0.683)PVY(0.001)EDAASFK 244.0 9.346599999999999e-58 1094574000.0 34662.59 34138.77 33429.630000000005 34398.920000000006 40687.66 33708.78 35977.98 36576.090000000004 40477.759999999995 42764.979999999996 44478.200000000004 True False 38181.51061954993 37015.763957923744 35698.3657204957 36523.663162784425 37829.89912640692 33434.26687179041 37347.141716806065 35846.551191562496 38776.62051240212 40064.79186448285 39007.66337054033 0.9788207577792437 0.9489356900541517 0.9151628843130372 0.9363201998499636 0.9698068496709062 0.857120472820756 0.9574308863886388 0.918961765308783 0.9940769880024986 1.0271005336541357 1.0 15.251469960462613 -8.772701943736697 23.52422668934815 0.9972030405668311 0.9344151853521054 0.4880949441777237 0.03228285410292796 63.62517884862004 132893.9533366645 0.0050575418477815885 0.005411492321758841 1.6877109038566707e-09 8.772701943736697 -0.06278785521472563 LPSSGS(ph)GKR ddPTM_A549_PD325901_60min_R1 1 LPSSGSGKR 9 1 P57078-2;P57078 P57078-2 RIPK4 Receptor-interacting serine/threonine-protein kinase 4 1 LPSS(0.023)GS(0.977)GKR 68.355 0.001882 8056500.0 2866.2 2778.2 3019.8 2033.0 3077.3 2730.7 2322.0 2744.1 3099.8 2746.6 2729.0 True False 3157.1745140150815 3012.3286640937463 3224.7417875325827 2158.573792722002 2861.1610641086763 2708.4620845606983 2410.364980647154 2689.3667727951947 2969.526185844873 2573.1792072623116 2393.3503005563293 1.3191443447627382 1.2586242237057972 1.347375595951415 0.9019046615199814 1.1954627216265021 1.131661371898264 1.0071091474101679 1.1236828859402892 1.2407403066549065 1.075136893527112 1.0 11.224815855750416 -6.223218831787314 24.998387326429015 1.1048339645905185 1.303405726395226 0.5285550566187367 0.09271074281882266 428.9988248929395 280588.90410317446 0.014931583686481013 0.03950424934279384 5.981101440908635e-07 6.223218831787314 0.19857176180470737 LPSSPAS(ph)PSPK ddPTM_A549_MK2206_60min_R1 2 LPSSPASPSPK 11 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 LPSS(0.007)PAS(0.99)PS(0.003)PK;LPS(0.002)S(0.078)PAS(0.917)PS(0.003)PK 177.1 1.6582e-15 37416000.0 10283.7 11688.2 11137.9 10261.2 13782.3 11151.4 10552.8 10128.2 14121.9 14201.7 15112.3 True False 12019.337147674092 12283.079455661355 12717.421699347122 12775.19446064277 11754.941927302405 12331.433746299761 12470.107162344275 11563.903366311632 10923.31219804033 10993.526106490985 11359.498831738214 1.058086921413496 1.0813046981740668 1.1195407374676511 1.1246265922356653 1.0348116674354797 1.0855614256366646 1.0977691311084115 1.017994150763264 0.9616015952676374 0.9677826697578674 1.0 13.471611565719915 -8.424199205583776 3.617482271507189 0.98201546118082 1.0864564020278245 0.7824618808430915 0.025672144714731095 0.0865435389358098 2.102438859556338 0.004622373133372708 0.00558216207363893 3.765310491663686e-09 8.424199205583776 0.1044409408470045 LPSSPAS(ph)PSPK ddPTM_A549_PD325901_60min_R1 1 LPSSPASPSPK 11 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 LPSS(0.021)PAS(0.97)PS(0.008)PK 169.89 4.814e-15 25869000.0 6986.5 7339.5 7220.5 7104.6 8383.2 7334.3 7870.1 7780.1 7954.1 7577.9 8580.8 True False 7695.7643368105355 7958.025422977495 7710.526550393738 7543.435006282712 7794.392952469969 7274.571892479416 8169.600962183963 7624.919802129624 7619.816838127843 7099.430100747492 7525.415998172859 1.0226364015861762 1.0574864465844376 1.0245980490999864 1.002394420204043 1.035742469833218 0.9666670778393718 1.0856012430631754 1.0132223659105257 1.0125442686461326 0.9433937077327295 1.0 12.877555619612512 -9.038244507026443 0.004126045455585938 6.428351930888017e-05 2.0285475484993674 0.19997152995108813 0.033278374272752785 9179.312445003081 25.383908551258248 6264.277920356546 6213.982277008254 9.157048047824945e-10 9.038244507026443 2.0284832649800584 LPSSPAS(ph)PSPKGT(ph)PEKANER ddPTM_A549_PD325901_60min_R1 1 LPSSPASPSPKGTPEKANER 20 2 A0A0C4DH22;Q9H4G0;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 2 LPS(0.048)S(0.048)PAS(0.546)PS(0.383)PKGT(0.975)PEKANER 40.756 0.045196 13740000.0 1723.5 1488.5 1721.9 1595.4 1795.2 1584.0 1742.6 1469.8 1898.5 1779.6 2008.1 True False 1898.4684512263589 1613.9411188912045 1838.758488625854 1693.9442345837115 1669.111345103789 1571.100429173527 1808.915596587308 1440.4836859642064 1818.7126472115904 1667.2357522915647 1761.1164303947096 1.0779914481865718 0.9164306749040326 1.0440868399676124 0.9618581743650286 0.9477575226129143 0.8921048046899458 1.0271414004024058 0.8179377928132545 1.0327043776452487 0.9466925204473257 1.0 10.782274576000672 LPSSPASPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 LPSSPASPSPK 11 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 LPS(0.001)S(0.035)PAS(0.383)PS(0.581)PK 154.28 4.0945e-13 23382000.0 7865.7 7324.8 7759.8 8088.5 9567.9 8599.4 7665.5 8008.3 8673.9 8734.4 8902.1 True False 8664.2200735777 7942.086602387839 8286.426691468092 8588.108274683682 8895.883711463091 8529.369337521985 7957.2147972225475 7848.568174110182 8309.366147299766 8182.908493377972 7807.198135061378 1.109773304544113 1.0172774489635008 1.0613829120404341 1.1000243782869186 1.1394463874962428 1.0925006884630486 1.0192151729168317 1.005298961078369 1.064321156393252 1.0481235843918595 1.0 12.930589168252267 -7.7603392858116385 24.996055930596665 1.0281050477548472 1.0854248448458566 0.44221672464158057 0.033163317752626265 25.61641235982137 582039.1422654199 0.005873189291668649 0.008443227125826128 1.7364437290465378e-08 7.7603392858116385 0.05731979709100932 LPSSPASPS(ph)PKGT(ph)PEKANER ddPTM_A549_PD325901_60min_R1 1 LPSSPASPSPKGTPEKANER 20 2 A0A0C4DH22;Q9H4G0;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 2 LPS(0.021)S(0.022)PAS(0.303)PS(0.69)PKGT(0.964)PEKANER 48.115 0.0083172 12565000.0 1446.8 1270.7 1814.8 2057.0 2121.3 1684.3 1627.4 1964.2 1729.7 1728.4 2152.9 True False 1593.6780709221339 1377.7863485220375 1937.9632412789367 2184.056218214048 1972.3072060877175 1670.5836192278862 1689.3315975474502 1925.0224901149088 1657.0067241937784 1619.2685290294107 1888.1069483575382 0.844061334718604 0.7297183825951026 1.0264054390376396 1.1567439122629974 1.044595067987767 0.8847928983478001 0.894722409139481 1.019551615860258 0.8776021536466493 0.8576148350272268 1.0 10.882724770492732 -5.760538797291473 24.99967505163471 0.9646279801786888 0.7868898352865337 0.38959817030230204 0.0895496026057048 18.595283381901762 516107.4101116421 0.012808049607693816 0.044508075936051265 1.7356462036147549e-06 5.760538797291473 -0.17773814489215511 LPSSPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 LPSSPVYEDAASFK 14 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 0 89.40299999999999 0.0002016 1181100.0 1233.4 1563.2 1098.3 1018.4 1512.5 1237.2 1320.2 1142.6 2066.2 1781.0 1851.9 False True 1441.5677662651785 1642.7602030329583 1254.055455013329 1267.9080457177133 1290.0132535966352 1368.1196828131058 1560.063251054403 1304.567049065745 1598.2089990433963 1378.6708630417795 1392.0221201601332 1.0355925709710314 1.1801250707452702 0.9008875914048456 0.9108390070495846 0.9267189327768992 0.9828289816656952 1.1207172849199687 0.9371740794720075 1.148120404048999 0.990408732070423 1.0 10.442966421417529 -7.73035303929739 24.18865190796087 1.0631139949922839 0.9877066293895778 0.04060218731477383 0.09154329302310282 238.36559107201677 185474.12398286664 0.014975960110107005 0.022211477207518253 1.8605740554770748e-08 7.73035303929739 -0.07540736560270611 LPSSPVYEDAASFK ddPTM_A549_PD325901_60min_R1 1 LPSSPVYEDAASFK 14 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 0 81.92 0.0011477 2080000.0 1763.2 2122.4 2104.0 2210.4 2507.0 2074.3 2038.5 2004.7 2096.1 2529.3 2412.7 False True 1942.1987660007628 2301.262096563449 2246.7900923798115 2346.9313878173707 2330.9169686804817 2057.407588531974 2116.076233010001 1964.7146858432732 2008.0082063841012 2369.5995663469607 2115.9531953654287 0.9178836139923888 1.0875770322348823 1.0618335496744233 1.1091603505020118 1.101591932083322 0.9723313318263905 1.0000581476210542 0.9285246432419143 0.9489851716863306 1.1198733372444596 1.0 11.047092000223193 -7.279853157189384 23.300650545218428 0.9731887056476888 1.0607061279871541 0.12222363091491106 0.06787667185189583 256.1253397002039 324098.5519083705 0.0076447265341401645 0.01223937457885592 5.249849371360214e-08 7.279853157189384 0.08751742233946536 LPST(ph)SGSEGVPFR ddPTM_A549_MK2206_60min_R1 1 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.101)T(0.449)S(0.449)GSEGVPFR 190.37 1.5189e-25 39736000.0 10775.0 10221.0 9315.4 7534.3 10319.0 7470.2 7381.3 7371.6 10689.0 10625.0 9438.0 True False 12593.556576542323 10741.205242579239 10636.463794620015 9380.203838227577 8801.088769496648 8260.69160568256 8722.38666490522 8416.546874578189 8267.958566825504 8224.805120617026 7094.284124451292 1.775169468211336 1.5140647109915433 1.4993005084135522 1.3222199271519999 1.240588707063853 1.1644151066928805 1.2294949725571998 1.1863842393300208 1.1654394469949412 1.1593565998110027 1.0 12.792441395697589 -2.0000000000000004 0.2420780864745029 1.0352574199380424 5.381194322261623 0.9270881178389416 0.056366445143864574 7.070147493805517 0.08502792607317847 0.027369977865719087 12.574625255144822 0.00999999999999999 2.0000000000000004 4.345936902323581 up LPSTS(ph)GSEGVPFR ddPTM_A549_PD325901_60min_R1 1 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.001)T(0.05)S(0.474)GS(0.474)EGVPFR 172.41 9.3989e-22 128350000.0 11618.0 13020.0 13170.0 13619.0 16589.0 11746.0 14769.0 14465.0 14464.0 15486.0 14288.0 True False 12797.450807280446 14117.241093693978 14063.795397643587 14460.214699006861 15423.845868943157 11650.34447037389 15331.042376906906 14176.484227427023 13856.128379914904 14508.2113171427 12530.666579094473 1.021290505696725 1.1266153324394141 1.122350140662661 1.153986071509679 1.2308878998245405 0.9297465858528813 1.2234817900656967 1.1313431841749224 1.1057774374933704 1.157816403905237 1.0 13.613175541597498 -10.342519340406277 0.715551363805184 0.9988383190493831 1.119905497501142 0.0 0.09227680546055961 0.7824761463248726 0.7289086196008576 0.05140760762229403 0.015421353411508382 4.5444429902218326e-11 10.342519340406277 0.12106717845175885 LPSTSDDCPAIGT(ph)PLR ddPTM_A549_MK2206_60min_R1 2 LPSTSDDCPAIGTPLR 16 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR 245.18 9.6539e-66 29321000.0 5509.5 6862.799999999999 6215.9 5483.299999999999 9536.3 7418.9 6276.9 7324.4 9182.7 9672.3 10623.4 True False 6439.368905657536 7212.087206611172 7097.408087787803 6826.708746154691 8133.522902660219 8203.96307373275 7417.3314804903675 8362.656130034258 7102.833111758684 7487.320712295911 7985.3165890756345 0.8064012032368206 0.9031686002878979 0.8888073514201628 0.854907713426668 1.0185598544442607 1.027381066513535 0.9288713099537841 1.0472541741769945 0.8894867263591981 0.9376360509662184 1.0 12.963133891100751 -6.7447820606607145 24.999818459053326 0.9630859019236558 0.8679878697808989 0.5286893324808711 0.050926419466688584 202.09200472864464 303304.210379369 0.00825366395123711 0.01714429703662489 1.7997738580401182e-07 6.7447820606607145 -0.09509803214275692 LPSTSDDCPAIGT(ph)PLR ddPTM_A549_PD325901_60min_R1 2 LPSTSDDCPAIGTPLR 16 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR 158.38 2.7692e-20 30095000.0 9049.8 9310.4 8581.4 8633.9 10019.4 9120.3 9091.4 9398.0 9277.0 9957.0 10862.0 True False 9968.529033889361 10095.020082851643 9163.785408150245 9167.196393990407 9315.671909053533 9046.027300625821 9437.378202004971 9210.549517411631 8887.119951636512 9328.313320727753 9526.042859891113 1.0464501556949015 1.0597286020364423 0.9619718851711099 0.9623299547169151 0.9779162288127702 0.9496101827038411 0.9906923935583516 0.9668809654628104 0.9329288228436646 0.9792432658479956 1.0 13.217661324400476 -5.761767412689756 24.99997867069667 0.9678058867270433 1.053089404213588 0.7675871583138008 0.01782188841919325 3.647801564857989 278122.0108678812 0.0033421789114467006 0.01144101505409119 1.730743014066674e-06 5.761767412689756 0.08528351748654484 LPSTSGS(ph)EGVPFR ddPTM_A549_MK2206_60min_R1 2 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPST(0.005)S(0.051)GS(0.944)EGVPFR;LPS(0.001)T(0.014)S(0.326)GS(0.659)EGVPFR 113.34 2.4501999999999997e-05 16539700.0 6283.4 7374.9 6379.6 5867.299999999999 8487.3 6221.5 6852.5 7427.6 9122.8 9459.4 9483.400000000001 True False 7343.884305619124 7750.250909255219 7284.323209326257 7304.788763393109 7238.829413058328 6879.855000502537 8097.51054980329 8480.485046071002 7056.500366118036 7322.514970161383 7128.410051475038 1.0302275335717392 1.0872341592711137 1.0218720804113894 1.02474306481311 1.0154900406662832 0.9651317686303598 1.1359490393131526 1.1896741327775031 0.9899122406205965 1.0272297633391867 1.0 12.799364612853902 LPSTSGS(ph)EGVPFR ddPTM_A549_PD325901_60min_R1 1 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.006)T(0.053)S(0.174)GS(0.766)EGVPFR 176.25 5.1404e-22 133480000.0 9703.1 9638.4 10844.0 10053.0 12670.0 10769.0 11748.0 12517.0 12037.0 11810.0 11292.0 True False 10688.151568955314 10450.661793967745 11579.939050269337 10673.950977980467 11780.10290912712 10681.300834450578 12195.076568752269 12267.33861560346 11531.126749795063 11064.314584492784 9903.15558588569 1.0792672574172648 1.055286035176745 1.1693180976348039 1.0778333113531349 1.1895302267003174 1.0785754845328217 1.2314334015041732 1.2387302723070697 1.164389133321263 1.1172514143130314 1.0 13.273672589925967 -10.681806000508157 1.0239812743990035 1.002743377682084 1.143706941950691 0.10653273337384528 0.06916403389349048 0.3989358516716364 0.7654475949927736 0.038779099949884085 0.011063701606121586 2.080625895840169e-11 10.681806000508157 0.1409635642686069 LQAALDDEEAGGRPAMEPGNGS(ph)LDLGGDSAGR ddPTM_A549_MK2206_60min_R1 9 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 LQAALDDEEAGGRPAMEPGNGS(0.999)LDLGGDS(0.001)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.973)LDLGGDS(0.027)AGR;LQAALDDEEAGGRPAMEPGNGS(0.997)LDLGGDS(0.003)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.991)LDLGGDS(0.009)AGR 198.52 1.5543999999999997e-88 476169800.0 16188.54 18351.78 16085.300000000001 16378.990000000002 22489.619999999995 18501.32 16034.94 16639.46 25556.199999999997 23070.339999999997 24676.41 True False 18920.76978019662 19285.80721520995 18366.437412843396 20391.84328528081 19181.42668981946 20459.11740221774 18948.281038374702 18998.154411209074 19767.761504865382 17858.73417095301 18548.57636273056 1.020065875147912 1.0397459534393538 0.9901804350735437 1.0993751157233773 1.0341185390572873 1.1030020311060642 1.021549075671773 1.0242378735535653 1.0657293108804036 0.9628088874160906 1.0 14.179020841153159 LQAALDDEEAGGRPAMEPGNGS(ph)LDLGGDSAGR ddPTM_A549_PD325901_60min_R1 9 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 LQAALDDEEAGGRPAMEPGNGS(0.996)LDLGGDS(0.004)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.982)LDLGGDS(0.018)AGR;LQAALDDEEAGGRPAMEPGNGS(0.985)LDLGGDS(0.015)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.5)LDLGGDS(0.5)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR 217.35 1.8576999999999997e-101 691709900.0 21991.899999999998 24979.719999999998 23598.69 25121.2 28806.300000000003 26000.5 24782.89 29209.5 23530.0 26242.2 28307.999999999996 True False 24224.50149841889 27084.84867073497 25200.239013851024 26672.879469615353 26783.044864340067 25788.76054843829 25726.016440667758 28626.89360809053 22541.115927779156 24585.263013478132 24826.29545919697 0.9757598163702211 1.0909742339629376 1.015062398466523 1.074380167329166 1.0788176153127274 1.038767970469987 1.0362406458486535 1.1530876064509907 0.9079532612840446 0.9902912439709346 1.0 14.599581380436893 -8.778997410737842 24.997416644526055 0.9565334860699576 1.0574504970669698 0.4136931912701879 0.04830911560006298 155.36516433617732 221192.8249711127 0.008706932352343108 0.009278992496651742 1.6634225676600426e-09 8.778997410737842 0.10091701099701222 LQAALDDEEAGGRPAMEPGNGSLDLGGDS(ph)AGR ddPTM_A549_MK2206_60min_R1 3 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 LQAALDDEEAGGRPAMEPGNGS(0.2)LDLGGDS(0.8)AGR;LQAALDDEEAGGRPAMEPGNGS(0.042)LDLGGDS(0.958)AGR;LQAALDDEEAGGRPAMEPGNGS(0.16)LDLGGDS(0.84)AGR 71.748 5.5119e-05 12407600.0 2944.86 3183.91 3177.97 3019.31 4316.1 3741.1 3255.3999999999996 2800.17 5735.6 5346.0 4488.0 True False 3441.8803730855147 3345.9574194208462 3628.6539327767514 3759.0410855419777 3681.2074075030964 4136.980718858802 3846.864041419865 3197.102672660971 4436.49575787112 4138.334887041751 3373.505737501314 1.0202681248838914 0.9918339198969698 1.0756329513357876 1.114283294009223 1.091211248459204 1.2263150090039503 1.1403164365948752 0.9477092738039922 1.3150995145949096 1.2267164217443811 1.0 11.720032900169539 -6.080717438375245 1.4687745809893007 1.1384377008998776 0.9996564780839983 0.20048913662022905 0.0978785806678629 0.7017432357262285 2.7078363135118626 0.01817708745263216 0.08967987824850193 8.303908625138588e-07 6.080717438375245 -0.13878122281587935 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR ddPTM_A549_PD325901_60min_R1 2 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 102.17 4.3065e-14 11469300.0 3296.0 3295.2 3562.4 2974.0 3919.5 3495.8999999999996 3463.3 3777.3 3829.4 4120.8 4491.6 False True 3630.6074936130435 3572.8980685054057 3804.165886451445 3157.6972255559467 3644.207841540944 3467.4305494619502 3595.097776690478 3701.958788265473 3668.463635097216 3860.6119847398704 3939.1616745983147 0.9216700896094255 0.9070199102375615 0.9657298178398237 0.8016165586496128 0.9251226891855238 0.8802458075843084 0.9126555530516727 0.9397834092816132 0.9312802921376152 0.9800592876486964 1.0 11.94367291521003 -9.897433044333733 0.47169753733419406 1.00502180202834 0.899955183870098 0.4106666010018136 0.03892310127834992 0.7042271920252932 0.311254512871202 0.03181473857833553 0.01105784524410658 1.2663884929925946e-10 9.897433044333733 -0.10506661815824192 LQADPKPIS(ph)PQQK ddPTM_A549_MK2206_60min_R1 1 LQADPKPISPQQK 13 1 H7C1N2;J3KR05;O75128-3;O75128;O75128-7;O75128-2;O75128-6 H7C1N2 COBL Protein cordon-bleu 1 LQADPKPIS(1)PQQK 68.944 0.00099707 3758800.0 1460.1 1890.8 1862.1 1757.8 2454.2 1807.9 1586.4 1827.9 2418.0 2136.4 2372.8 True False 1706.5291839823149 1987.0336437402225 2126.173780187852 2188.46107891064 2093.1904310590826 1999.2107780131055 1874.6283453057906 2087.010422708975 1870.3268607525563 1653.785756205761 1783.568274051497 0.9568062006989043 1.114077701789649 1.1920899306860306 1.2270127870907916 1.1735970310260442 1.120905101923439 1.0510549960879516 1.1701320622664972 1.0486432664021217 0.9272343426747964 1.0 10.800550727128014 -9.03864648487826 0.894723214790099 1.0100362131926888 1.1345502810872972 0.36840215467960546 0.07565832298658727 0.41962848193469543 0.7015740063609465 0.018712369853591225 0.016830054837709232 9.148576313393378e-10 9.03864648487826 0.1245140678946084 LQAITAS(ph)SANLRHSPR ddPTM_A549_PD325901_60min_R1 1 LQAITASSANLRHSPR 16 1 I3VM54;Q9Y2K7;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 LQAIT(0.006)AS(0.413)S(0.342)ANLRHS(0.238)PR 58.158 0.0031288 3650000.0 285.76 212.16 368.17 219.2 400.52 338.41 332.74 336.14 438.7 431.22 369.26 True False 314.7701448346064 230.03946777558468 393.1562301860623 232.73948616068034 372.3888569189895 335.6541011594779 345.40260278231466 329.4354240032711 420.2629646203449 403.9926956075342 323.84336093200073 0.9719827015403923 0.7103417748430773 1.2140320834572107 0.7186791956792654 1.1499042495337188 1.036470533758934 1.0665730549123125 1.017267802110183 1.2977353107096425 1.2474941417507177 1.0 8.33915235766776 -7.068860257120957 0.8930842446596442 1.1318076341592098 0.901623076172641 0.25005200021990837 0.1590876127153361 0.6503359310466249 1.0035199768150802 0.028062570050929842 0.07829362857580216 8.533746600984492e-08 7.068860257120957 -0.23018455798656878 LQAITASSANLRHS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LQAITASSANLRHSPR 16 1 I3VM54;Q9Y2K7;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 LQAIT(0.054)AS(0.265)S(0.214)ANLRHS(0.468)PR 71.592 0.00045661 3891700.0 274.32 345.44 515.67 387.71 529.08 416.63 363.36 498.02 569.05 488.62 601.5 True False 302.1687644562895 374.55144112178556 550.6664671756165 411.6579661467033 491.9192460269123 413.23710341323607 377.1878636382214 488.08660041086813 545.1348074246804 457.7684498115894 527.5193132226569 0.5728108087840743 0.7100241294174072 1.0438792540344197 0.7803656772902824 0.9325141917965789 0.783359192839288 0.7150219038123005 0.925248778910309 1.0333930791925114 0.8677757161440137 1.0 9.04308010365235 -8.504543309533016 4.47021858284635 1.0149044993684586 0.802634114949548 0.2730169624555844 0.12340476483302007 0.14773065131658555 7.27005416235396 0.01923256936739287 0.022687689108928516 3.129368383229489e-09 8.504543309533016 -0.21227038441891066 LQAKES(ph)PQR ddPTM_A549_MK2206_60min_R1 4 LQAKESPQR 9 1 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR 115.33 0.00017137 2454610000.0 24415.7 26387.399999999998 25040.1 23114.500000000004 29150.6 23264.399999999998 21893.8 22103.5 32386.7 34501.8 32441.2 True False 28536.47325344635 27730.405950301865 28591.16270516184 28777.553537649335 24862.585355566327 25726.223366341124 25871.62006206248 25236.73881412977 25051.164160932512 26707.819417459246 24385.154708428592 1.170239582018435 1.137183925296853 1.1724823175011256 1.1801259365273797 1.0195787417732771 1.054995290124159 1.0609577987676289 1.0349222351009664 1.02731208640943 1.095249127463105 1.0 14.573715504942491 -6.764881786926383 24.999962146143073 1.0221895134100503 1.163554406561789 0.7872371581418213 0.029693712122366683 20.33771549698929 147701.028365027 0.003510924543218707 0.006830651787882498 1.7183760580128555e-07 6.764881786926383 0.14136489315173884 LQAKES(ph)PQR ddPTM_A549_PD325901_60min_R1 8 LQAKESPQR 9 1 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR 113.93 0.00018652 4318177000.0 53917.59999999999 51786.43 55012.99999999999 54965.6 59659.0 54226.4 56289.8 57911.99999999999 55044.700000000004 54537.5 57497.39999999999 True False 59391.27505996077 56150.654200591875 58746.51300004304 58360.700276065225 55468.75765237686 53784.798177105615 58431.939141960465 56756.89972891485 52731.3626821005 51093.99294257201 50425.58430604887 1.1778004335953012 1.1135350234078745 1.1650140262826072 1.1573628958239852 1.1000121945185477 1.06661725227949 1.1587756482367857 1.125557601562715 1.0457263591048769 1.0132553473741892 1.0 15.621868275701619 -8.911215968639008 0.5178828277460338 0.9997073246802214 1.146345273535152 0.7079173551612832 0.03234275711593148 0.2850551962854409 0.17948272661124126 0.013604294739794472 0.011688234060958468 1.22682899434953e-09 8.911215968639008 0.14663794885493064 LQAKES(ph)PQRK ddPTM_A549_MK2206_60min_R1 2 LQAKESPQRK 10 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 LQAKES(1)PQRK;LQAKES(1)PQRK 72.958 0.00038652 1280540000.0 8121.2 8106.1 7965.200000000001 6195.700000000001 8860.599999999999 6929.5 6884.6 6878.0 9512.1 9381.0 9308.5 True False 9491.860015723025 8518.665866047504 9094.785131814773 7713.6467781355395 7557.217477565845 7662.775090570173 8135.44270429416 7852.977562991591 7357.624537702394 7261.825584612548 6996.942548469464 1.356572524351984 1.2174840377831753 1.2998227538404183 1.1024310582374084 1.080074250319368 1.0951604986732892 1.162713949405478 1.1223441536917262 1.0515485137593172 1.037856968855779 1.0 12.772508930469611 -2.0000000000000036 0.20521862126972013 0.9969729624316243 2.6755467139043305 0.7742850053631278 0.05046882992354798 14.820077723953558 0.16678401771920706 0.03768625476696711 8.168774172215008 0.009999999999999919 2.0000000000000036 1.6785737514727064 LQAKES(ph)PQRK ddPTM_A549_PD325901_60min_R1 3 LQAKESPQRK 10 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 LQAKES(1)PQRK;LQAKES(1)PQRK;LQAKES(1)PQRK 105.95 6.2785e-05 2155965000.0 144628.0 125938.90000000001 159203.6 150653.59999999998 172826.7 154000.5 163737.0 161479.19999999998 161040.0 166329.19999999998 165767.3 True False 159310.52809049387 136552.21308560792 170008.11366501852 159959.13071284967 160687.94881174748 152746.37098670323 169968.10113532463 158258.3706780181 154272.04883168516 155827.14592608096 145378.97298549314 1.0958292304513042 0.9392844802888654 1.1694133627012417 1.1002906914799255 1.105303920586796 1.0506771911364738 1.1691381335613449 1.088591888001645 1.0611716788443637 1.0718685290315706 1.0 17.149459093328062 -9.788213263297248 0.8657756697963024 1.007841932768349 1.0882525116075636 0.06517852302769622 0.06165113607118113 0.5519443892094729 0.8601285053811274 0.02083846995096328 0.011749202875161662 1.6284961520079903e-10 9.788213263297248 0.08041057883921465 LQAKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LQAKSPK 7 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 LQAKS(1)PK;LQAKS(1)PK 46.606 0.017149 76631000.0 20498.8 15857.0 12455.9 10031.400000000001 21628.0 17116.300000000003 17903.699999999997 18365.7 20208.1 20266.1 21211.0 True False 23958.49629245715 16664.05356927688 14222.333917964605 12489.093450326664 18446.549850438347 18927.535505119606 21156.570540753448 20969.09421759736 15630.997615704599 15687.973934582267 15943.723306180995 1.5026914248548844 1.0451795511790292 0.8920334130767906 0.7833235192613349 1.156978799505826 1.187146511617011 1.326952941572409 1.3151943128283061 0.9803856549395109 0.9839592442312656 1.0 13.960700957943404 LQAKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 LQAKSPK 7 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 LQAKS(1)PK 44.203 0.022899 34539000.0 15909.0 14428.0 12367.0 11921.0 14246.0 10438.0 9094.7 11808.0 12566.0 15767.0 18695.0 True False 17524.06996841319 15643.898195070406 13206.298988812321 12657.333095444663 13245.410106031966 10352.996388707876 9440.803785310804 11572.4801768032 12037.894719442114 14771.468929186942 16395.63351736921 1.0688254253700253 0.9541502729063546 0.8054765907533753 0.7719941460045283 0.8078620501001099 0.6314483900692289 0.575812076752594 0.7058269608517135 0.7342134542522805 0.9009391990579895 1.0 14.001024027221806 -5.5544986202711915 2.6501581424953606 0.8098004389738844 1.0655314046442996 0.36800952214924976 0.11662401220000801 0.3569263990199429 4.516749586090916 0.02135713036693028 0.1498394342859714 2.789339517898526e-06 5.5544986202711915 0.2557309656704152 LQALAEEPS(ph)QPHTRSPAK ddPTM_A549_MK2206_60min_R1 1 LQALAEEPSQPHTRSPAK 18 1 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 LQALAEEPS(0.369)QPHT(0.36)RS(0.271)PAK 72.876 0.00028513 9664000.0 1362.6 1654.9 1689.6 1511.2 2158.4 1349.8 1494.8 1065.1 2730.8 2374.5 2369.6 True False 1592.5735676284519 1739.1273413505908 1929.210686324792 1881.444067840346 1840.9022192151901 1492.6349400752752 1766.385810995395 1216.0811867319485 2112.278160191514 1838.0988008381278 1781.1629223670034 0.8941200985208397 0.976399923618132 1.0831185974616218 1.0563009392425922 1.0335394904632298 0.8380114594411718 0.9917036722547701 0.6827456216727705 1.1858983440911113 1.031965564607342 1.0 10.79860376996223 LQALAEEPS(ph)QPHTRSPAK ddPTM_A549_PD325901_60min_R1 1 LQALAEEPSQPHTRSPAK 18 1 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 LQALAEEPS(0.967)QPHT(0.019)RS(0.014)PAK 117.74 1.8405999999999998e-10 15551000.0 2631.2 2222.6 2600.8 2308.2 3047.0 2942.0 2464.6 2863.5 3295.2 2979.6 3062.0 True False 2898.3174870129355 2409.9063022153778 2777.3059278809005 2450.7722716974567 2832.989231579348 2918.0413274169896 2558.3917016808696 2806.3852461277065 3156.714203366675 2791.467547498283 2685.3934116172513 1.0792897139296447 0.897412755907536 1.0342268346477754 0.9126306265201953 1.0549624570178746 1.0866345745816173 0.9527064789140537 1.0450555341303192 1.175512753442549 1.0395004081793549 1.0 11.390917743976063 -7.513317356104716 0.9442670332446497 1.078440853906792 0.9834363222105379 0.09558290824437787 0.07352604689622329 0.7037190500847366 1.2560301532324476 0.015249229290878056 0.030603897247420443 3.0667801521934436e-08 7.513317356104716 -0.09500453169625411 LQALAEEPSQPHT(ph)RSPAK ddPTM_A549_MK2206_60min_R1 1 LQALAEEPSQPHTRSPAK 18 1 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 LQALAEEPS(0.159)QPHT(0.42)RS(0.42)PAK 79.568 0.00017662 9622700.0 1006.2 1404.3 914.13 911.83 1185.9 1056.1 1007.2 1057.3 1541.6 1634.0 1838.4 True False 1176.0219607718698 1475.7728717497334 1043.7673796697936 1135.2283909336045 1011.4556809522304 1167.855801017557 1190.1952025920284 1207.1755128454508 1192.430061429338 1264.878265137714 1381.8745427411798 0.8510338126926003 1.0679499665883494 0.7553271642151437 0.8215133543756358 0.7319446517524222 0.8451243328507372 0.8612903456713782 0.8735782268995389 0.8629076117604374 0.9153350944787042 1.0 10.432410927319497 -10.458646255345343 0.6119677600002306 1.01092136481988 0.8486805001608012 0.1674755544766966 0.08425372205998112 0.9191422107615634 0.5666164902889307 0.07811812329757367 0.017918402659158665 3.478193544072757e-11 10.458646255345343 -0.16224086465907883 LQAVTDDHIR ddPTM_A549_MK2206_60min_R1 2 LQAVTDDHIR 10 0 A0A2R8YEP4;P30043 A0A2R8YEP4 BLVRB Flavin reductase (NADPH) 0 ; 135.86 6.4246e-07 10852400.0 711.7 758.81 537.77 752.15 949.17 744.35 581.77 675.8 881.75 738.6099999999999 1081.0900000000001 False True 831.8175606055846 797.4301878604393 614.0338723868864 936.4267837652959 809.5483503578956 823.1166229404589 687.4700784471443 771.5967195507009 682.0350328654123 571.7574880130762 812.6255164338887 1.0236173289954245 0.9813009458032621 0.7556172676948438 1.1523472556888128 0.9962133036512355 1.0129101367043079 0.8459863301659855 0.9495108188784941 0.8392980765093897 0.7035928314461088 1.0 9.666446855666235 -7.732393541474285 24.994508501707475 0.9191674100569198 0.9841589776715747 0.14649945592222136 0.11627448298511867 431.3320848269791 371168.8965195368 0.015632186799574815 0.02318409315282299 1.8518527829010187e-08 7.732393541474285 0.06499156761465485 LQAVTDDHIR ddPTM_A549_PD325901_60min_R1 2 LQAVTDDHIR 10 0 A0A2R8YEP4;P30043 A0A2R8YEP4 BLVRB Flavin reductase (NADPH) 0 ; 157.38 1.4544999999999999e-08 12392400.0 967.67 1212.69 1233.63 1049.62 1125.4499999999998 1304.83 1566.8000000000002 1222.4299999999998 1382.96 1092.87 1433.71 False True 1065.9071460389964 1314.8876422359256 1317.3515502198238 1114.4526435400237 1046.4022745917218 1294.2038970950073 1626.4254313858569 1198.0476746722163 1324.839000572947 1023.8660016896392 1257.3727590365024 0.8477256552430625 1.0457421101149793 1.0477016785613216 0.8863343312718216 0.8322132534456665 1.029292139338797 1.2935109494754375 0.9528182204219648 1.0536565159787163 0.8142899504791289 1.0 10.296196697261491 -7.490391204359669 24.845479328253756 1.043052740032565 0.9410217134793938 0.10775990242327771 0.12470003908694244 818.6942920656165 626112.888023824 0.01562233010345625 0.024961911485616717 3.233023010496351e-08 7.490391204359669 -0.10203102655317131 LQCS(ph)DTEQVEADLE ddPTM_A549_MK2206_60min_R1 1 LQCSDTEQVEADLE 14 0 P08910 P08910 ABHD2 Abhydrolase domain-containing protein 2 1 LQCS(0.986)DT(0.014)EQVEADLE 50.843 0.024984 1152200.0 300.7 0.0 171.94 0.0 0.0 138.71 0.0 148.78 183.42 204.32 432.32 True False 351.45080859083777 0.0 196.3236774424034 0.0 0.0 153.38820013175393 0.0 169.87002061964077 141.87566286155248 158.16397009359716 324.9630125749928 1.0815101872854909 0.0 0.6041416094919331 0.0 0.0 0.47201741181654033 0.0 0.522736477833579 0.43659018833354574 0.4867137611764266 1.0 8.344131709111705 -10.181781506687098 0.6017520045542223 1.0180733786109106 0.2996631068449949 0.10578082133655509 0.35284126335285343 0.6336992370908872 0.4236299920730374 0.22350558073036886 0.068335987931796 6.579887878920645e-11 10.181781506687098 -0.7184102717659158 LQCS(ph)DTEQVEADLE ddPTM_A549_PD325901_60min_R1 1 LQCSDTEQVEADLE 14 0 P08910 P08910 ABHD2 Abhydrolase domain-containing protein 2 1 LQCS(0.945)DT(0.055)EQVEADLE 49.298 0.028007 1926000.0 154.14 149.13 240.65 0.0 191.52 189.34 311.63 374.91 126.41 271.36 208.52 True False 169.78817932812933 161.69770847178054 256.9819561460084 0.0 178.06829590813163 187.79807781547686 323.4892501804792 367.43212593879457 121.09742730261638 254.22628328941283 182.87336191718785 0.928446754344769 0.8842059159223176 1.4052454302359234 0.0 0.9737246258357073 1.0269296514629567 1.7689249368476512 2.009216225297931 0.662192820392584 1.390176680869116 1.0 7.514701131297563 -6.978577683893347 24.9720173034896 1.0222697529464049 0.807304664849235 0.045025009398753535 0.5069471062238369 803.5328895037553 936674.457160031 0.07826215439411863 0.14789333418343328 1.0505635197952863e-07 6.978577683893347 -0.21496508809716985 LQDAEIAR ddPTM_A549_MK2206_60min_R1 4 LQDAEIAR 8 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ;;; 125.82 0.0030166 103660200.0 11259.3 11063.9 11334.5 10405.300000000001 12508.4 11213.599999999999 10917.0 11555.7 14900.1 15165.699999999997 14671.900000000001 False True 13159.594576544128 11627.005252262243 12941.902535599169 12954.598967111666 10668.430929777287 12400.21570901475 12900.47758806312 13193.755862847043 11525.25114057037 11739.757836963909 11028.46230615987 1.1932392940395624 1.0542725657926093 1.1735001831008263 1.17465142532844 0.9673543449315241 1.1243830159430928 1.1697439978425324 1.1963368506485046 1.045046065409592 1.0644963469120032 1.0 13.428944030140823 -8.932683948639784 6.444935870520063 1.0195545752760948 1.1275178069957585 0.2846970767835716 0.06650373451232637 0.16586991929800854 12.046836788489777 0.011417760856837284 0.012047806735401652 1.1676590544786627e-09 8.932683948639784 0.10796323171966371 LQDAEIAR ddPTM_A549_PD325901_60min_R1 2 LQDAEIAR 8 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ; 191.78 1.0579e-09 140941000.0 16455.6 15823.699999999999 16056.5 15801.599999999999 17090.699999999997 15636.400000000001 16815.6 17333.7 16361.199999999999 16890.300000000003 18514.199999999997 False True 18126.160398027536 17157.218732279976 17146.190645578172 16777.62894396261 15890.308191714204 15509.062342631898 17455.526859849382 16987.965755475416 15673.595661605614 15823.843575483364 16237.07077118358 1.1163442380380937 1.0566695787721399 1.0559903868872724 1.033291606620227 0.97864377236781 0.9551638076343363 1.0750416196268746 1.046245717277064 0.9652969973760303 0.9745503852558441 1.0 13.987003767918852 -2.0000000000055085 0.3809198887348609 0.9887334153371101 2.831076397167177 0.5024450296699048 0.034987669817717976 34.754804258071665 0.4144744221211041 0.008794735034095879 47.95085607620016 0.009999999999873162 2.0000000000055085 1.8423429818300667 LQDEIQNMKEEMAR ddPTM_A549_MK2206_60min_R1 1 LQDEIQNMKEEMAR 14 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 71.98 0.0016515999999999998 1613600.0 1268.8 1611.8 1447.6 1447.9 2084.9 1914.1 938.45 1441.0 2312.5 1963.5 1921.4 False True 1482.9424208182738 1693.8337354455748 1652.891447398064 1802.6355649987004 1778.2139718503297 2116.648791523252 1108.954217506442 1645.2661628774192 1788.7224423036741 1519.9439862900258 1444.2633520577153 1.0267811744343236 1.1728011605586224 1.1444529455400954 1.2481349488169133 1.231225572065384 1.4655559794600859 0.767833799788978 1.1391732404850714 1.2385015791996594 1.0524008548195067 1.0 10.496118116960627 LQDELELT(ph)RR ddPTM_A549_MK2206_60min_R1 1 LQDELELTRR 10 1 Q9BV73;Q9BV73-2;H7C0P0 Q9BV73 CEP250 Centrosome-associated protein CEP250 1 LQDELELT(1)RR 42.788999999999994 0.045873000000000004 1216500.0 109.39 114.94 129.4 128.87 202.42 94.197 123.12 140.13 215.48 323.13 250.73 True False 127.85235767127286 120.7899550515662 147.7508657732174 160.44315578519416 172.64428614415255 104.16486401709199 145.4893103089063 159.99385663012671 166.67412405085224 250.1347085764686 188.4668212040339 0.6783812495720936 0.6409083268868804 0.7839622105859289 0.8513071678091214 0.916046044822118 0.5526960308006854 0.7719624567307781 0.8489231983008703 0.8843685216636147 1.3272081896349976 1.0 7.558166755191539 -9.087597234315222 0.47994011297296935 0.9995225853299131 0.7285939430897024 0.496622110124758 0.13978292868566458 0.5187627586283535 0.2882351002036624 0.04954750682250275 0.03615977798271244 8.17340022966291e-10 9.087597234315222 -0.27092864224021074 LQDS(ph)FASETNLDFR ddPTM_A549_MK2206_60min_R1 1 LQDSFASETNLDFR 14 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 LQDS(0.998)FAS(0.002)ETNLDFR 84.566 0.00023397 1586700.0 1995.8 2124.9 1724.4 1668.2 2801.0 2089.3 2297.4 2148.8 2927.9 2763.7 3006.9 True False 2332.642247374773 2233.04833381828 1968.9458496084708 2076.909074888344 2388.976610462262 2310.3883392349044 2714.807841972723 2453.3989804240077 2264.735324895536 2139.37825052699 2260.203743781795 1.0320495458837589 0.9879854150148082 0.8711364429093509 0.9189034752297329 1.0569740082214905 1.0222035715103897 1.2011341231699229 1.0854769120588026 1.0020049436367002 0.9465422116978541 1.0 11.142237113450665 -6.761925167507789 24.99999670161865 1.0277359515489748 0.9492390326178243 0.25378160673269445 0.07241882023926349 16.811850146233258 865263.287361198 0.010885844365395476 0.02149790475675207 1.73011444640618e-07 6.761925167507789 -0.07849691893115052 LQDS(ph)FASETNLDFR ddPTM_A549_PD325901_60min_R1 2 LQDSFASETNLDFR 14 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 LQDS(0.999)FAS(0.001)ETNLDFR;LQDS(0.956)FAS(0.04)ET(0.005)NLDFR 133.48 6.7832e-09 8004600.0 1605.5500000000002 1952.79 1913.38 1902.66 2801.8999999999996 1841.78 2133.0299999999997 2533.75 2211.09 2168.81 2621.0 True False 1768.5442540565593 2117.3584666171 2043.2334728886324 2020.1829869456217 2605.104210030253 1826.7811543202129 2214.203623888802 2483.212368561578 2118.1655765725973 2031.8709664685707 2298.6336158879203 0.7693893632428249 0.9211378672886948 0.8888904515995989 0.8788625438096457 1.1333272914935375 0.7947248059428386 0.9632694869614946 1.0802993358305857 0.9214889932575829 0.8839472947861228 1.0 11.166560814804692 -3.9908750946501477 0.6342682279291351 0.9677240942411394 1.7513713129850493e-17 0.2511728358210469 0.09061139204315201 12.462206714120379 1.0148261326775765 0.01365678565477987 12.725736197425643 0.00010212331534370595 3.9908750946501477 -0.9677240942411394 LQDSFAS(ph)ETNLDFR ddPTM_A549_MK2206_60min_R1 1 LQDSFASETNLDFR 14 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 LQDS(0.071)FAS(0.893)ET(0.036)NLDFR 49.988 0.026657999999999998 1274900.0 873.53 1110.3 778.16 649.77 1345.8 704.0 866.08 864.98 1581.7 883.46 1263.1 True False 1020.9605082419503 1166.8095275252647 888.5147891042257 808.9636791692834 1147.8346027704797 778.4968127226206 1023.4355252788948 987.5935638901522 1223.44747545588 683.8857724103825 949.4374102134373 1.075332083251738 1.2289483382195372 0.9358329254210491 0.8520452959478658 1.2089628978411984 0.8199559068855433 1.0779389081043504 1.0401881717175407 1.2886025579936273 0.7203063256762152 1.0 9.890929086462318 -8.557899088952437 24.982061794961172 1.1377640799450621 1.0271756427618297 0.0 0.18503343499416436 314.54703550433845 224383.47495528954 0.025729905352869932 0.029175015205175174 2.7675846363607594e-09 8.557899088952437 -0.11058843718323241 LQDSFAS(ph)ETNLDFR ddPTM_A549_PD325901_60min_R1 1 LQDSFASETNLDFR 14 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 LQDS(0.001)FAS(0.704)ET(0.295)NLDFR 124.43 9.2116e-07 2642900.0 1166.0 1051.8 1149.9 1501.4 1342.5 1041.2 1160.1 1035.8 1330.0 1295.1 1424.1 True False 1284.371461636168 1140.4388772924206 1227.9391289104308 1594.1380680732002 1248.207431373572 1032.7208124087604 1204.2482403310778 1015.1401564306188 1274.1047251995872 1213.327164976852 1248.9447281136925 1.0283653333290268 0.9131219753934583 0.9831813220149567 1.2763880035595014 0.9994096642361155 0.826874712036697 0.9642125974220487 0.8127983037038048 1.0201450044341789 0.971481873989224 1.0 10.2864939167395 -6.987482804220125 24.999751941455624 0.9755512284743736 1.0484543878214576 0.15125934577228373 0.1071351868235843 481.3384349857847 961338.2744111402 0.016218496634054246 0.03063657546725428 1.0292412789350716e-07 6.987482804220125 0.07290315934708402 LQEDPNYS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 LQEDPNYSPQR 11 0 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5;H0Y4L1;P46379-4 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 LQEDPNYS(1)PQR;LQEDPNYS(1)PQR 225.63 1.4027e-39 27781000.0 7018.3 7599.6 6368.7 6319.0 8105.700000000001 6230.0 7040.0 7236.700000000001 9216.1 9746.7 9897.3 True False 8202.817459039163 7986.387179483929 7271.877425424184 7867.15528367069 6913.362267555863 6889.254464860694 8319.076872763977 8262.524386464265 7128.668065087527 7544.913700622864 7439.527258416159 1.1025992881146462 1.073507348259141 0.9774649884100745 1.057480537458985 0.9292744051357485 0.9260339031713399 1.1182265463645966 1.1106249227216782 0.9582151953301918 1.0141657444816112 1.0 12.860995233467495 -5.653156415313424 4.434890844817356 0.9958021814751963 1.0960401051156048 0.16073208505153402 0.06290724610166955 0.2248031024170742 7.457681169565932 0.008943097917978558 0.03809716217638604 2.2225092885003374e-06 5.653156415313424 0.10023792364040851 LQEDPNYS(ph)PQRFPNAQR ddPTM_A549_MK2206_60min_R1 2 LQEDPNYSPQRFPNAQR 17 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5;H0Y4L1;P46379-4 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 LQEDPNYS(1)PQRFPNAQR;LQEDPNYS(1)PQRFPNAQR 205.36 2.7865000000000004e-49 113404000.0 13982.400000000001 16172.1 15392.5 14877.5 18571.2 15702.699999999999 13761.400000000001 16370.9 23233.8 22597.0 24995.0 True False 16342.287283141104 16995.190813375957 17575.387955287853 18522.488167876367 15839.401081119886 17364.34929139134 16261.668249553144 18691.525208778567 17971.381396754638 17492.322005701906 18788.051673093883 0.8698234158331954 0.9045744129879386 0.9354555895999227 0.9858652983375692 0.843057138479307 0.924222989883437 0.8655324422404724 0.9948623483693335 0.9565324659230745 0.9310343781283307 1.0 14.197527846131631 -8.27468338993564 24.914156762030196 0.9800542870918175 0.906875741471724 0.3750216699454164 0.04055375584380672 508.2208728933252 956044.5030982875 0.0062637181684052625 0.007594819838848619 5.312716115751607e-09 8.27468338993564 -0.07317854562009352 LQEDPNYS(ph)PQRFPNAQR ddPTM_A549_PD325901_60min_R1 2 LQEDPNYSPQRFPNAQR 17 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5;H0Y4L1;P46379-4 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 LQEDPNYS(1)PQRFPNAQR;LQEDPNYS(1)PQRFPNAQR 190.79 3.0363999999999996e-40 214590000.0 15986.300000000001 19617.8 21670.0 18183.2 18680.8 17960.1 15959.0 19342.5 18348.9 19889.6 19753.0 True False 17609.217407507946 21271.06085467509 23140.65651229587 19306.33496695659 17368.72505326141 17813.838900252165 16566.32847809989 18956.698663602285 17577.75954301857 18633.767261619625 17323.50622458379 1.0164926879824536 1.227872728471637 1.3357952029051117 1.1144588581934394 1.0026102584598866 1.0283044707758147 0.9562918882201001 1.094276090408351 1.0146767816594753 1.075634863984777 1.0 14.080443336223851 -6.575664646534096 4.417079110950601 1.0117548889031425 1.2012945323207393 0.4668273982756084 0.07856847694939521 0.10930823401159892 4.490207532442937 0.010268606672233177 0.022343297079353175 2.6566561866339627e-07 6.575664646534096 0.18953964341759688 LQEEERER ddPTM_A549_MK2206_60min_R1 2 LQEEERER 8 1 H0YN88;A0A075B716;H3BNC9;P08708 H0YN88 RPS17 40S ribosomal protein S17 0 ; 85.73100000000001 0.0029546999999999998 8100400.0 1359.1100000000001 1294.38 1402.77 1204.04 1430.8000000000002 1078.74 970.83 1231.48 1223.68 2128.17 2006.17 False True 1588.4945409507598 1360.2584132560144 1601.703879294406 1499.0298540514098 1220.3312153692991 1192.8915507903416 1147.217244372933 1406.0460612493282 946.5184338154213 1647.414918921744 1507.9826215247335 1.0533904822753328 0.9020385207626902 1.0621500914081559 0.9940630831247435 0.8092475323988895 0.7910512586572114 0.7607629080055129 0.9324020324767825 0.6276719773192007 1.0924628012331 1.0 10.558404087284213 -6.757719267781913 22.22956340751346 0.8204365834280409 0.9999369588898877 0.1925290699566864 0.1267896404074655 24.420181459294156 145911.69496269058 0.019536463584882178 0.039388522713117886 1.7469510343256866e-07 6.757719267781913 0.17950037546184672 LQEEERER ddPTM_A549_PD325901_60min_R1 2 LQEEERER 8 1 H0YN88;A0A075B716;H3BNC9;P08708 H0YN88 RPS17 40S ribosomal protein S17 0 ; 91.867 0.0026273000000000004 13102200.0 2072.8 1915.73 1966.61 1806.69 2232.62 2177.33 2208.5 2130.2 1918.52 2010.02 2305.1 False True 2283.22913008529 2077.175290355019 2100.075980786626 1918.2851380093055 2075.8084733208684 2159.5985463714605 2292.5456760375714 2087.711489890428 1837.8912762330158 1883.1069941678404 2021.5873132328304 1.1294239507439596 1.027497193298713 1.0388252671749707 0.9489004632412692 1.0268210824895463 1.0682687471548924 1.1340324808288575 1.032709038202191 0.9091327711658141 0.9314992144249568 1.0 10.981272800241864 -8.627663001878119 6.9681174985212015 0.9572642331101834 1.0498181449638595 0.43974669070683603 0.05216991146618389 0.18300523430105778 10.911210970537871 0.009851617384248442 0.011169153953315785 2.3568774332746196e-09 8.627663001878119 0.09255391185367612 LQEEGGGS(ph)DEEETGSPSEDGMQSAR ddPTM_A549_MK2206_60min_R1 4 LQEEGGGSDEEETGSPSEDGMQSAR 25 0 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 LQEEGGGS(0.999)DEEETGSPSEDGMQSAR;LQEEGGGS(1)DEEETGSPSEDGMQSAR;LQEEGGGS(0.98)DEEET(0.017)GS(0.004)PSEDGMQSAR;LQEEGGGS(0.998)DEEET(0.002)GSPSEDGMQSAR 96.46 2.8689000000000003e-09 19528600.0 1127.02 1313.39 1346.23 965.3100000000001 1581.16 1343.72 1286.26 1196.3 1863.0700000000002 1776.06 1589.24 True False 1317.2334230064723 1380.235941057739 1537.1456571087974 1201.810993334412 1348.5734585499863 1485.9115585108534 1519.95679238088 1365.8791885150968 1441.0876197114414 1374.8468124727592 1194.5878472073491 1.1026676908574269 1.155407653178784 1.286758157386469 1.0060465591910621 1.1289027104223581 1.2438696425587679 1.2723692074502206 1.1433894892771463 1.2063471289117396 1.150896366212674 1.0 10.222297234789796 -10.771576735803679 0.940250358963455 0.9963891602459694 1.1743499127978505 0.0629101979638832 0.0882632700311425 0.4749071791768018 0.720705196361698 0.058726436692066446 0.013703727439030816 1.6920892415592606e-11 10.771576735803679 0.17796075255188115 LQEEGGGS(ph)DEEETGSPSEDGMQSAR ddPTM_A549_PD325901_60min_R1 3 LQEEGGGSDEEETGSPSEDGMQSAR 25 0 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 LQEEGGGS(1)DEEETGSPSEDGMQSAR;LQEEGGGS(1)DEEETGSPSEDGMQSAR;LQEEGGGS(1)DEEETGSPSEDGMQSAR 170.77 6.135599999999999e-60 37335000.0 616.4000000000001 686.86 930.21 779.04 815.9300000000001 542.73 886.65 743.4300000000001 908.76 764.11 588.03 True False 678.9764742303031 744.7441027353796 993.3396444071407 827.1595314717899 758.6218916056905 538.3101868215581 920.3919509434971 728.6017054404474 870.5679774980279 715.8639641961712 515.7060378292921 1.3165959372673788 1.4441252343489202 1.926174160357521 1.6039361007939072 1.4710355046430694 1.0438314608209966 1.7847220769754946 1.4128236863529366 1.6881089489710444 1.3881240700795032 1.0 9.010405126324818 -10.872247020226865 1.0370784076191855 0.9895374382547093 1.5340971306893738 0.1414003488661043 0.2512276980335808 0.4218378322261246 0.7796603507267692 0.1730305697745738 0.03865778130320299 1.3420014336079669e-11 10.872247020226865 0.5445596924346645 LQEES(ph)DLELAK ddPTM_A549_MK2206_60min_R1 2 LQEESDLELAK 11 0 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 LQEES(1)DLELAK;LQEES(1)DLELAK 150.11 1.0058999999999998e-11 5881600.0 8474.6 9529.900000000001 8256.900000000001 7711.5 12421.400000000001 8845.0 8085.4 8977.7 12689.7 12122.7 12964.199999999999 True False 9904.905295922561 10014.931204506012 9427.852578074804 9600.817846182394 10594.228514529079 9780.972029164184 9554.412520887194 10250.316468053154 9815.503211286892 9384.173650419201 9744.8313462822 1.0164265490034807 1.0277172429799781 0.9674721134780513 0.9852215502780609 1.0871638654445195 1.0037087027571567 0.9804595052876257 1.0518721262388808 1.0072522409566025 0.9629898473306472 1.0 13.250421501649837 LQEES(ph)DLELAK ddPTM_A549_PD325901_60min_R1 2 LQEESDLELAK 11 0 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 LQEES(1)DLELAK;LQEES(1)DLELAK 176.89 1.7494e-15 15847000.0 8172.5 7556.8 8161.2 7959.8 10360.1 7710.7 9236.3 8360.9 8847.9 8613.1 9689.099999999999 True False 9002.166183723482 8193.638056591904 8715.068109282382 8451.458767982589 9632.442316404733 7647.906615674437 9587.79245079729 8194.135290500833 8476.053532401065 8069.267396079163 8497.402124265413 1.0594021622228107 0.9642521251517483 1.0256155918990106 0.9945932467816692 1.1335749650941043 0.9000287974879836 1.1283204337732975 0.9643106411430663 0.9974876330963103 0.9496158094055998 1.0 13.052806124112161 LQEKEDLQELNDR ddPTM_A549_MK2206_60min_R1 2 LQEKEDLQELNDR 13 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 94.007 0.00017576 13611500.0 6557.7 7515.700000000001 6341.799999999999 6216.4 7138.2 6358.5 5707.3 5680.3 8856.4 8925.2 8847.3 False True 7664.479439627996 7898.217027849798 7241.16260093192 7739.4182790647965 6088.1802359163585 7031.3522495693005 6744.242533512193 6485.4999201891715 6850.439540764652 6908.991121179389 6650.271236941922 1.152506291330224 1.187653367275548 1.0888522201481987 1.1637748301261335 0.9154784848619141 1.0573030781828103 1.0141304456949463 0.9752233689601328 1.030099269141205 1.0389036589666134 1.0 12.699197468014397 -6.739608970624948 24.99993856169771 1.0091317240109872 1.1467761774399587 0.7337883461443735 0.041586176112779795 88.64408433392815 101513.68855445948 0.005341236911204331 0.011111174025780357 1.8213400157957182e-07 6.739608970624948 0.13764445342897158 LQEKEDLQELNDR ddPTM_A549_PD325901_60min_R1 2 LQEKEDLQELNDR 13 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 108.63 7.2015e-05 24018000.0 7121.700000000001 6475.200000000001 7655.9 6678.799999999999 7756.9 7636.0 7967.7 8255.3 8734.4 7948.700000000001 8458.8 False True 7844.689741281555 7020.887828716374 8175.475412666634 7091.33430734467 7212.0821038522645 7573.81494770773 8270.915183592735 8090.641565342433 8367.32354269419 7446.817725466372 7418.4212247511405 1.0574608132399106 0.9464126686809832 1.1020505798982707 0.9559088237918921 0.9721855749832004 1.020947007220098 1.1149158200935392 1.0906150136566075 1.1279116255595045 1.0038278361196973 1.0 12.856896472374457 -7.551632145525719 16.43833728317494 1.0683809717964523 1.0049780394691248 0.21614513615955522 0.05570813905067994 6.366465868562131 3638.9653893292225 0.009405504338231415 0.013953431214216635 2.8078108924165058e-08 7.551632145525719 -0.06340293232732752 LQEKLS(ph)PPYSSPQEFAQDVGR ddPTM_A549_MK2206_60min_R1 1 LQEKLSPPYSSPQEFAQDVGR 21 1 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LQEKLS(0.978)PPY(0.009)S(0.011)S(0.002)PQEFAQDVGR 57.347 0.0013487 3694100.0 1616.1 1285.5 1542.3 1640.1 2358.1 1833.4 1504.2 1367.1 2472.1 2009.2 1960.1 True False 1888.858170148498 1350.9264591855604 1761.0213313912914 2041.9245736268872 2011.226613756181 2027.4091710875755 1777.493669319826 1560.8906115681593 1912.173297132504 1555.3203245499972 1473.3530739920502 1.2820132549970773 0.9169061259194479 1.1952473324128643 1.3859030870952693 1.3650676468925147 1.3760511359265097 1.2064275024748188 1.0594138222000828 1.2978377897916014 1.0556331350610053 1.0 10.524887483575494 -10.906405427770515 0.9220164112125953 0.9855858444914731 1.2340900922247986 0.24878418681975234 0.1356869389223046 0.7422348334353163 1.00676151863118 0.13378890060202958 0.02512740969620647 1.240493726374488e-11 10.906405427770515 0.24850424773332547 LQEKLS(ph)PPYSSPQEFAQDVGR ddPTM_A549_PD325901_60min_R1 2 LQEKLSPPYSSPQEFAQDVGR 21 1 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LQEKLS(0.995)PPY(0.001)S(0.004)S(0.001)PQEFAQDVGR;LQEKLS(0.99)PPY(0.004)S(0.003)S(0.003)PQEFAQDVGR 78.128 5.8026e-05 12023100.0 6138.6 6130.7 6670.200000000001 6271.8 6494.4 6432.7 5830.700000000001 7205.8 7955.9 7278.2 7100.6 True False 6761.786153001523 6647.355604693516 7122.879883171016 6659.194841708732 6038.255748463708 6380.31422395489 6052.590479181466 7062.074666159253 7621.541190387511 6818.653209894615 6227.271214411972 1.0858345365386537 1.06745882358702 1.1438204051055796 1.0693600153944067 0.969647144079606 1.0245762556782054 0.9719490721993549 1.1340560613154713 1.223897422798727 1.0949664749005936 1.0 12.604384398495291 -8.307627656328215 24.994365750581604 1.110808047270676 1.0489537906560875 0.1803080903339016 0.06727914523895931 816.5960798149272 441892.14706903236 0.015374926213933913 0.01858743600786942 4.924615681371841e-09 8.307627656328215 -0.06185425661458854 LQELAS(ph)PPAGRPTPAPR ddPTM_A549_MK2206_60min_R1 2 LQELASPPAGRPTPAPR 17 1 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 LQELAS(1)PPAGRPTPAPR;LQELAS(1)PPAGRPTPAPR 95.195 8.615700000000001e-07 23745000.0 4739.8 4750.8 4025.2000000000003 4221.6 7764.5 6043.5 5204.5 6104.700000000001 8783.8 6111.0 6842.200000000001 True False 5539.7623630158105 4992.595427692539 4596.033886478787 5255.892189514826 6622.352335570955 6683.019158649378 6150.090281860811 6970.05991985966 6794.283324846276 4730.520855726178 5143.092904886692 1.0771266367271384 0.9707379431059551 0.8936322892615611 1.02193218880432 1.2876205929079658 1.2994163788679631 1.1957960697185392 1.355227301695655 1.321050086104941 0.9197813345412231 1.0 12.328420499446898 -6.6264545970473225 6.155379396274529 1.1928578951607423 0.9762663119583068 0.36197901746788796 0.13217568945013922 0.19199421799284094 9.938569687832993 0.020600675654275587 0.04322796521238081 2.3634444705604938e-07 6.6264545970473225 -0.21659158320243543 LQELAS(ph)PPAGRPTPAPR ddPTM_A549_PD325901_60min_R1 2 LQELASPPAGRPTPAPR 17 1 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 LQELAS(1)PPAGRPTPAPR;LQELAS(1)PPAGRPTPAPR 138.28 2.9445e-13 38096000.0 3294.7 3195.0 3059.2 3666.1 4113.9 3702.8 4236.0 3398.2 3662.9 3716.7 3726.9 True False 3629.175518570051 3464.2538628534758 3266.8157084640306 3892.5466706828015 3824.9538561845343 3672.645624459426 4397.203298028143 3330.420235163673 3508.9610510778703 3482.0269277040106 3268.51492676562 1.1103438717232124 1.0598861992291864 0.9994801252741192 1.1909221031261117 1.170242125823651 1.123643522134291 1.3453214675630756 1.0189398885380987 1.0735643341700094 1.0653238567735936 1.0 11.674419570401103 LQELESCSGLGS(ph)TSDDTDVR ddPTM_A549_MK2206_60min_R1 2 LQELESCSGLGSTSDDTDVR 20 0 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7;B4DGD8 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 LQELESCSGLGS(0.971)T(0.024)S(0.005)DDTDVR;LQELESCSGLGS(0.959)T(0.034)S(0.007)DDTDVR 200.74 6.5567e-55 7184800.0 3451.1 3968.3999999999996 3833.3999999999996 3650.0 5047.3 4202.4 3762.0 3991.1 5338.6 6092.700000000001 5821.4 True False 4033.56130870582 4170.374609593136 4377.033762403797 4544.250163854724 4304.848856117883 4647.095178672647 4445.50670388325 4556.850647231132 4129.415623992388 4716.354838436076 4375.785717533454 0.9217913236801415 0.9530573201705808 1.0002852161762268 1.0384992449804489 0.9837887716641763 1.0620024559365593 1.0159333639374593 1.041378838312892 0.9436969473724732 1.0778303927310668 1.0 12.095326375667073 -4.097061368942751 11.696511366832357 0.987230880415007 0.762798342666716 0.0 0.050338873997358397 0.0 0.0 0.006001356043977549 0.0 7.997212406428506e-05 4.097061368942751 -0.22443253774829097 LQELLGPS(ph)PQRDPQAVK ddPTM_A549_MK2206_60min_R1 2 LQELLGPSPQRDPQAVK 17 1 O14978 O14978 ZNF263 Zinc finger protein 263 1 LQELLGPS(1)PQRDPQAVK;LQELLGPS(1)PQRDPQAVK 47.32 0.006776899999999999 5169200.0 2326.5 2401.77 2065.02 2179.0 3056.0 2293.76 2146.12 2490.5 3188.4 3453.4 3173.3999999999996 True False 2719.1563225360287 2524.009834210892 2357.870887473025 2712.855097819028 2606.466448258719 2536.4841607253416 2536.0422241727583 2843.5360018363713 2466.2324908285573 2673.2745415095364 2385.357198615568 1.1399367457897684 1.0581265714316483 0.9884770670160026 1.1372951184810123 1.0926943980429766 1.0633561137918823 1.0631708431947409 1.192079745325658 1.0339048978743848 1.1207019825211386 1.0 11.219989605435877 -8.980100563539565 23.123378226832486 1.014957853531872 1.0885785807089847 0.0 0.05982954217511156 51.15325624850658 59442.23876200831 0.008850436378718093 0.009033582785547117 1.0468861071111008e-09 8.980100563539565 0.07362072717711277 LQELLGPS(ph)PQRDPQAVK ddPTM_A549_PD325901_60min_R1 2 LQELLGPSPQRDPQAVK 17 1 O14978 O14978 ZNF263 Zinc finger protein 263 1 LQELLGPS(1)PQRDPQAVK;LQELLGPS(1)PQRDPQAVK 98.132 3.6181999999999994e-07 15341500.0 3407.6000000000004 3928.2000000000003 3183.7 3582.8 4875.1 3906.0 3658.2 4315.6 3889.7 4501.0 4355.700000000001 True False 3753.537043457468 4259.2432000190975 3399.76502714335 3804.101418870826 4532.689794181977 3874.19083103017 3797.414802843851 4229.521972477296 3726.2294357961123 4216.806091854533 3819.976513057235 0.9826073617540141 1.1149919863277653 0.889996316868038 0.9958441906299303 1.1865753045047749 1.0141923170960927 0.9940937568238273 1.107211512432125 0.9754587294082354 1.1038827274044427 1.0 11.89934805260897 LQELNAHIVVS(ph)DPEDITDCPR ddPTM_A549_PD325901_60min_R1 2 LQELNAHIVVSDPEDITDCPR 21 0 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 LQELNAHIVVS(1)DPEDITDCPR;LQELNAHIVVS(1)DPEDITDCPR 139.73 4.6045e-19 18462700.0 2317.7 2034.4299999999998 2282.33 2392.2 2440.7 2357.8999999999996 2224.5 2571.9 2148.79 2734.3999999999996 2563.6 True False 2552.99119779944 2205.8785559327052 2437.222638565216 2539.960760919614 2269.2736519578975 2338.698044159254 2309.154564793107 2520.6014368834817 2058.4838289185113 2561.7495173443763 2248.293451999341 1.1355240106798072 0.9811346263411845 1.084032262958319 1.1297283095589243 1.009331611022529 1.0402103168870234 1.0270699150680904 1.121117634640614 0.9155761349071059 1.139419551778834 1.0 11.134614636107916 -8.766493536622516 24.999754372638336 0.9601331745717437 1.06186510393232 0.0 0.07428962303007776 85.18863359213317 421374.31097549445 0.00915411693893545 0.009893390340370475 1.7120106554718622e-09 8.766493536622516 0.10173192936057618 LQELNAHIVVSDPEDITDCPRTPDT(ph)PNNDPR ddPTM_A549_PD325901_60min_R1 1 LQELNAHIVVSDPEDITDCPRTPDTPNNDPR 31 1 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 LQELNAHIVVS(0.137)DPEDIT(0.267)DCPRT(0.267)PDT(0.328)PNNDPR 50.253 0.0047776 6767300.0 2050.0 1855.8 1902.3 2457.8 2087.6 2175.2 1961.6 2327.5 1850.9 2288.1 2320.1 True False 2258.114490869764 2012.1947789306657 2031.4015174591802 2609.612723931204 1940.9741778290274 2157.4858923852626 2036.249761428708 2281.0761866115727 1773.113109678131 2143.62897551041 2034.7424083256644 1.1097790470332343 0.9889186811545583 0.9983580767507405 1.2825273180788448 0.9539164121645273 1.0603238442160354 1.0007408078275049 1.1210638640439061 0.8714189582047286 1.053513686420064 1.0 10.990630450282124 -8.75919492410043 24.994165252150882 0.9392811750220992 1.0610556425255036 0.11870373980818738 0.09564031676889032 57.664314693612425 642147.0979983208 0.015542380829088877 0.01721187503484371 1.7410252747985748e-09 8.75919492410043 0.12177446750340437 LQETSS(ph)QSYVEEQK ddPTM_A549_MK2206_60min_R1 2 LQETSSQSYVEEQK 14 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1 A0A494C108 KRI1 Protein KRI1 homolog 1 LQET(0.001)S(0.103)S(0.677)QS(0.218)Y(0.001)VEEQK;LQET(0.031)S(0.194)S(0.768)QS(0.007)YVEEQK 104.41 2.3429000000000002e-05 5753900.0 4082.2 5134.4 3958.0 4563.8 5452.9 4668.4 3637.1 4219.9 7214.9 6670.200000000001 6692.1 True False 4771.175559792213 5395.719029204465 4519.303915999955 5681.931204876764 4650.785633412951 5162.406989366883 4297.913990615037 4818.083747901749 5580.736669827796 5163.397187344907 5030.266877435945 0.9484935245074317 1.0726506486977487 0.8984222956980682 1.1295486588125099 0.9245604153280182 1.0262690062278153 0.8544107291591242 0.9578187132603287 1.1094315283471479 1.0264658542285576 1.0 12.296419227941323 -8.741910872116964 24.996373441970196 1.0516760069185935 0.9780794515166119 0.13250986309679058 0.0778342453312457 331.28681055718386 424045.1669894571 0.013150291956883163 0.01490054529379857 1.8117118621943765e-09 8.741910872116964 -0.07359655540198162 LQETSS(ph)QSYVEEQK ddPTM_A549_PD325901_60min_R1 1 LQETSSQSYVEEQK 14 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1 A0A494C108 KRI1 Protein KRI1 homolog 1 LQETS(0.03)S(0.636)QS(0.324)Y(0.009)VEEQK 78.69 0.00063449 6172400.0 2999.0 4031.5 2735.1 4122.3 3598.9 3034.9 2983.9 3299.8 5032.0 4542.6 3850.9 True False 3303.456272252887 4371.24865355048 2920.7203334924056 4376.9251085774295 3346.1256795309864 3010.1847806178885 3097.453947352733 3233.9829003569794 4820.522539251366 4255.779460755035 3377.2637128663837 0.978145786977691 1.2943166495696814 0.8648185578062259 1.2959974348176098 0.9907801001098107 0.8913087743636862 0.9171489734581112 0.9575748817116216 1.4273456114447294 1.260126487766343 1.0 11.721639120918997 -8.711613786531519 24.999922591370506 1.2018033929740242 1.0274880939607856 0.22773529880988774 0.16628059644232338 159.94279258069332 80250.81214498765 0.03346868615237758 0.0379498929652462 1.942612654470637e-09 8.711613786531519 -0.1743152990132386 LQEVFGHAIK ddPTM_A549_PD325901_60min_R1 1 LQEVFGHAIK 10 0 P54136-2;P54136;E5RH09;E5RJM9 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 0 46.843999999999994 0.036922 2025000.0 2723.4 2546.5 2481.2 2222.4 2462.0 2497.7 2750.7 2017.0 2435.4 3117.4 2722.7 False True 2999.8775631388858 2761.1024919425276 2649.5891526676755 2359.6726005633936 2289.07761343891 2477.3595593097953 2855.379393740794 1976.7693526941114 2333.0486073316333 2920.5668319811894 2387.8251606173367 1.2563221179742121 1.156325235817804 1.1096244383247322 0.9882099575302805 0.9586454030189978 1.0374962121051237 1.1958075661630847 0.8278534732346345 0.9770600652890592 1.2231074871604588 1.0 11.221481489294643 -5.739139205452274 1.2815493409442384 0.9925171379338505 1.2714572531215251 0.27194460197171966 0.10767953307952328 0.40368113059011956 0.9520271997267828 0.011604770994655495 0.11732654025358115 1.823311178338599e-06 5.739139205452274 0.2789401151876746 LQEYKS(ph)ELDER ddPTM_A549_PD325901_60min_R1 1 LQEYKSELDER 11 1 R4GN29;Q8NF67;Q8IVF6 R4GN29 ANKRD18A;ANKRD20A12P Putative ankyrin repeat domain-containing protein 20A12 pseudogene;Ankyrin repeat domain-containing protein 18A 1 LQEY(0.001)KS(0.999)ELDER 42.788999999999994 0.031307999999999996 21860000.0 493.73 386.7 319.12 167.58 256.04 539.1 356.4 179.31 425.0 227.97 257.96 True False 543.8531061351846 419.28856612376785 340.7774022244512 177.93103599820623 238.05663369004805 534.7097483380355 369.9629970295631 175.7335213840263 407.1387279773116 213.57593529439646 226.2325553431697 2.403955988165451 1.853352031884861 1.5063146049317686 0.7864961597958551 1.052265149588849 2.36354024082405 1.63532165593219 0.7767826390744604 1.799646948953599 0.9440548243396069 1.0 7.821662740908943 -10.980968491596958 1.0987983231535554 0.980920290917544 1.5694171840520572 0.16506577992450233 0.520879749175384 0.9312164724163826 1.8870913826022109 0.4437243165243774 0.08895534457982217 1.044796017236267e-11 10.980968491596958 0.5884968931345133 LQEYQSAIKVEPAS(ph)PPYYSEK ddPTM_A549_PD325901_60min_R1 1 LQEYQSAIKVEPASPPYYSEK 21 1 E7EU07;E7EUD1;A0A499FIV4;E9PFX5;A0A494C0D9;E9PFV2;P37231-3;P37231-2;P37231 E7EU07 PPARG Peroxisome proliferator-activated receptor gamma 1 LQEYQS(0.001)AIKVEPAS(0.996)PPY(0.002)Y(0.001)SEK 71.085 0.00017287 2681200.0 1755.1 1701.8 1828.5 1701.9 1991.9 1799.4 2277.6 1955.6 2040.5 2399.2 2174.8 True False 1933.276459963668 1845.2166584676193 1952.59300566373 1807.0224977046623 1851.9958156819505 1784.7462829891692 2364.2753143505415 1916.5940238614783 1954.7448810298924 2247.7141025499673 1907.313387193076 1.0136123790379308 0.9674428286707292 1.0237399992967544 0.9474177184715259 0.9709971251276465 0.9357383505894202 1.2395840821051225 1.0048658163523196 1.0248682225770038 1.178471308198516 1.0 10.897326194387015 LQFHDVAGDIFHQQCK ddPTM_A549_MK2206_60min_R1 2 LQFHDVAGDIFHQQCK 16 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 124.09 4.4941000000000005e-08 7812400.0 2470.1 2604.6 2354.37 2128.6 2894.8 2510.1000000000004 2400.8999999999996 2044.14 3064.5 3369.6 2941.9 False True 2886.9924918531055 2737.1630148539184 2688.2550683963677 2650.107095556485 2468.978754718371 2775.7171159304708 2837.1124522470204 2333.9031049162004 2370.3956430009143 2608.405019711165 2211.3450376905316 1.3055368758139172 1.2377819689832468 1.2156651370895553 1.198414110140037 1.1165054356677442 1.2552166525895723 1.2829804503100173 1.055422408143808 1.0719248252079607 1.1795558699583635 1.0 11.110708432081367 -8.333812208609759 6.070043884132391 1.0357968559501731 1.2252088645189358 0.531411405678688 0.06535437164130861 0.08677892201790305 5.758138255426622 0.00887735182647488 0.010764344467943245 4.636473601381861e-09 8.333812208609759 0.18941200856876272 LQFHDVAGDIFHQQCK ddPTM_A549_PD325901_60min_R1 2 LQFHDVAGDIFHQQCK 16 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 159.31 2.3023999999999998e-20 18027500.0 3746.4 4167.0 3671.8999999999996 3828.5 3949.1 4094.4 4019.5 4066.3 3469.0 3844.4 4201.7 False True 4126.731770046088 4518.167714087769 3921.0972149284385 4064.977749845641 3671.728839655402 4061.0565638939916 4172.464272054796 3985.1944565493623 3323.2099937724547 3601.6639279105907 3684.9175367708044 1.1198979974087717 1.2261245113363284 1.0640936128965874 1.1031394079466685 0.9964208976228651 1.1020752902527116 1.1323087234433047 1.0814880975712957 0.9018410753052227 0.9774069275555156 1.0 11.84741661887443 -8.666257946274277 6.1044280733189415 0.953843535232406 1.1046746495788147 0.5654542793400157 0.0561532888243534 0.1156314858975179 6.222698805820449 0.010598587807146622 0.012000828263754338 2.1564632119512556e-09 8.666257946274277 0.15083111434640872 LQGEHS(ph)QNGEEEPETEPVGEESISDAEK ddPTM_A549_MK2206_60min_R1 1 LQGEHSQNGEEEPETEPVGEESISDAEK 28 0 A0A1B0GVV3;Q5EBL4-3;Q5EBL4-2;Q5EBL4 A0A1B0GVV3 RILPL1 RILP-like protein 1 1 LQGEHS(1)QNGEEEPETEPVGEESISDAEK 125.77 9.954500000000002e-22 10830000.0 1100.1 1331.8 1337.3 929.39 1332.0 1068.5 1102.0 881.65 1688.0 1688.2 1492.7 True False 1285.7699851372818 1399.5829314222706 1526.949248829394 1157.0905917219031 1136.0645644897297 1181.5679607871032 1302.2191354809522 1006.6265874398854 1305.6706951820993 1306.8344474941798 1122.0213935758045 1.1459407035365181 1.2473763329609042 1.360891385469142 1.0312553738697758 1.0125159564642263 1.0530707948638376 1.1606009858072937 0.8971545401927107 1.163677183570464 1.1647143761932996 1.0 10.131884468729535 -6.277018283829757 24.648104280519483 1.063095077453367 1.2510001643718558 0.4740575769347546 0.08957836323598567 424.1936855357098 671135.9172474049 0.01261648609196492 0.029413880766327245 5.284230046593655e-07 6.277018283829757 0.18790508691848884 LQGEHS(ph)QNGEEEPETEPVGEESISDAEK ddPTM_A549_PD325901_60min_R1 2 LQGEHSQNGEEEPETEPVGEESISDAEK 28 0 A0A1B0GVV3;Q5EBL4-3;Q5EBL4-2;Q5EBL4 A0A1B0GVV3 RILPL1 RILP-like protein 1 1 LQGEHS(1)QNGEEEPETEPVGEESISDAEK;LQGEHS(1)QNGEEEPETEPVGEESISDAEK 162.19 2.5101e-46 21676000.0 2400.9 2070.35 2136.74 2877.5 2968.8 2585.3 2906.9 2885.3999999999996 3044.4 2974.3 2938.6 True False 2644.6376005508355 2244.8256603939567 2281.7520256614243 3055.2366397233486 2760.281729803993 2564.2461739534842 3017.523670216717 2827.848433447489 2916.4544551861813 2786.502190402785 2577.170829320201 1.0261786182208306 0.871042631266353 0.8853708879916581 1.1855002411808497 1.0710511303327506 0.9949849442576044 1.1708667643939892 1.0972685245678537 1.131649645419693 1.0812252562775595 1.0 11.331572454938671 -6.243533000588888 24.892854549910762 1.0761228551936546 0.9218818920367643 0.5231058255420682 0.06855355947496099 543.462503502722 755502.1895473613 0.010359419646451293 0.02734809316760055 5.707777030304397e-07 6.243533000588888 -0.1542409631568903 LQGQLQGGS(ph)REITK ddPTM_A549_MK2206_60min_R1 1 LQGQLQGGSREITK 14 1 U3KQU7;Q9UP83-3;Q9UP83;Q9UP83-2 U3KQU7 COG5 Conserved oligomeric Golgi complex subunit 5 1 LQGQLQGGS(0.978)REIT(0.022)K 40.179 0.03036 4642900.0 1394.0 1890.9 1731.0 1606.6 1580.1 1602.7 1760.7 1370.3 2028.1 2254.4 2425.2 True False 1629.273119972158 1987.1387333130897 1976.4818288519261 2000.2170721230145 1347.6693831458126 1772.2966502138418 2080.596399130046 1564.5442213677482 1568.738588210198 1745.1294742512011 1822.9559078850684 0.8937534434732354 1.090064068317758 1.0842181208567865 1.0972383168847997 0.739277004625599 0.9722103768653407 1.1413311699589506 0.8582457834555522 0.8605466437365429 0.957307561144384 1.0 10.832063951774275 LQGQLQGGS(ph)REITK ddPTM_A549_PD325901_60min_R1 1 LQGQLQGGSREITK 14 1 U3KQU7;Q9UP83-3;Q9UP83;Q9UP83-2 U3KQU7 COG5 Conserved oligomeric Golgi complex subunit 5 1 LQGQLQGGS(0.839)REIT(0.161)K 40.179 0.03036 4579900.0 1539.1 1635.0 1644.3 1412.8 2251.7 2136.9 1668.2 1885.1 2062.8 2000.2 2029.0 True False 1695.348298974464 1772.7871880329988 1755.8920859791474 1500.0654472983995 2093.548359943295 2119.4977948869378 1731.684263874067 1847.5002016676574 1976.1076895802303 1873.907030643732 1779.445862890726 0.9527394647569414 0.9962580064970844 0.9867634203418163 0.8429958329058292 1.1765170290386395 1.1910999031146665 0.9731592851388747 1.0382446806593917 1.110518578165691 1.0530845976957979 1.0 10.797212326232934 -6.760168775931077 24.999857060552056 1.0640173224452403 0.9513779911602266 0.423642494792713 0.07331168298000935 32.223734792080414 633996.176493785 0.011383191547961313 0.022712412380253687 1.7371256141624037e-07 6.760168775931077 -0.11263933128501369 LQGSGVSLAS(ph)KK ddPTM_A549_PD325901_60min_R1 1 LQGSGVSLASKK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LQGSGVS(0.001)LAS(0.999)KK 94.544 2.0696e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LQGVGALGQAASDNS(ph)GPEDAKR ddPTM_A549_PD325901_60min_R1 1 LQGVGALGQAASDNSGPEDAKR 22 1 A0A087WTD5;J3KN36;Q5JPE7-3;Q5JPE7-2;P69849;Q5JPE7 A0A087WTD5 NOMO2;NOMO3 Nodal modulator 2;Nodal modulator 3 1 LQGVGALGQAASDNS(1)GPEDAKR 143.89 3.2836e-27 5326400.0 5419.2 4708.9 5950.4 5456.1 6810.7 6810.8 6727.9 7132.4 6242.4 6986.2 6863.1 True False 5969.3531945958175 5105.735528885984 6354.22992666199 5793.110905297845 6332.339927639472 6755.335102913544 6983.933916148147 6990.138686740445 5980.05363653075 6545.090139727652 6018.982208775428 0.9917545836724266 0.8482722413503785 1.0556984065175976 0.9624735053796518 1.0520615791831351 1.122338440054623 1.1603180859989681 1.1613489530753407 0.9935323662881206 1.087408121955433 1.0 12.555303837013657 -6.75293686919912 24.318166341661268 1.03491902425709 0.9627547481311296 0.22357205007792058 0.07857747318189434 223.56451007182773 639412.8814549178 0.012647516071594821 0.02598948143278725 1.7662945577400812e-07 6.75293686919912 -0.07216427612596044 LQILT(ph)PR ddPTM_A549_MK2206_60min_R1 2 LQILTPR 7 0 O15231-3;O15231;O15231-6;O15231-2 O15231-3 ZNF185 Zinc finger protein 185 1 LQILT(1)PR;LQILT(1)PR 69.423 0.023344 6137800.0 703.4200000000001 832.8699999999999 1055.43 683.0 1186.3 972.27 970.27 757.19 1665.68 1244.4099999999999 1237.6599999999999 True False 822.1400990321486 875.2595255246027 1205.1058443819702 850.3350306610348 1011.7968414821072 1075.1549660594073 1146.5554996216902 864.5240012971221 1288.4061395443823 963.2969167197206 930.3148643217189 0.8837224154550737 0.9408207469228643 1.2953741691105818 0.9140292854301576 1.087585375968163 1.1556893341087155 1.2324381170214125 0.9292810793982486 1.3849140639967559 1.035452569514783 1.0 9.86157526762551 -4.092760156885614 0.5521151039272616 1.1629201718750883 3.780650986060462e-14 0.12802128307807503 0.15027692306419477 14.22134790368151 1.115537633714909 0.030309273090705108 14.308803161288932 8.076809563266349e-05 4.092760156885614 -1.1629201718750506 LQILT(ph)PR ddPTM_A549_PD325901_60min_R1 2 LQILTPR 7 0 O15231-3;O15231;O15231-6;O15231-2 O15231-3 ZNF185 Zinc finger protein 185 1 LQILT(1)PR;LQILT(1)PR 67.89699999999999 0.02456 16668800.0 1864.0300000000002 2139.79 1802.8600000000001 1504.77 1827.83 1853.2399999999998 2049.78 1954.4699999999998 2046.46 1807.04 1918.66 True False 2053.2649533736408 2320.1176128936586 1925.212921077885 1597.716225319374 1699.4495264711782 1838.1478278797642 2127.7854995826547 1915.4865625979462 1960.4544029563515 1692.9431860086245 1682.676983387836 1.2202371421517144 1.3788253097884686 1.1441369556275363 0.9495085753788554 1.0099677735233372 1.0923949433116447 1.2645240415059666 1.1383566670897112 1.1650806555927624 1.0061011131204274 1.0 10.716542539647788 -14.99999999990558 0.021921403806526886 4.1272298544343015e-07 1.9258581733675701 0.226762531066652 0.10930559899856783 2625.1020606197526 4.46655417632585 269.7740682337446 141.85351801783244 1.0000000002174111e-15 14.99999999990558 1.9258577606445848 LQINS(ph)PPFDQPMSR ddPTM_A549_MK2206_60min_R1 2 LQINSPPFDQPMSR 14 0 Q00537;Q00537-2;F5H6Z0;F8VQZ9 Q00537 CDK17 Cyclin-dependent kinase 17 1 LQINS(0.769)PPFDQPMS(0.231)R;LQINS(0.73)PPFDQPMS(0.27)R 57.328 0.010475 4557300.0 2369.78 2822.0 2569.1000000000004 2379.76 3623.3 2600.0 2268.83 2473.2 3469.8999999999996 3563.0 3926.4 True False 2769.740928441623 2965.6277462634403 2933.4370112671772 2962.8013068314863 3090.3173697564853 2875.1302742596786 2681.04704278879 2823.783673857343 2683.9731902916833 2758.11582538903 2951.3665168728044 0.9384605106167473 1.004832076703827 0.9939250155807063 1.0038744052605157 1.0470801752643415 0.9741691714067747 0.9084087074449708 0.956771603158714 0.9094001625848745 0.9345216223132672 1.0 11.527167378336287 -7.520409527647799 24.989763320908345 0.9522628980611101 0.9994198711258776 0.3680174100020871 0.03363060405580182 113.29664592213841 1146618.9841806798 0.006249903206888164 0.00936117605118588 3.0171053319558095e-08 7.520409527647799 0.047156973064767516 LQINS(ph)PPFDQPMSR ddPTM_A549_PD325901_60min_R1 3 LQINSPPFDQPMSR 14 0 Q00537;Q00537-2;F5H6Z0;F8VQZ9 Q00537 CDK17 Cyclin-dependent kinase 17 1 LQINS(0.739)PPFDQPMS(0.261)R;LQINS(0.985)PPFDQPMS(0.015)R;LQINS(0.974)PPFDQPMS(0.026)R 71.933 0.0016558 17613300.0 7540.8 7310.200000000001 7853.6 7997.8 9217.5 8337.9 8044.0 8856.0 8603.4 8794.1 8743.7 True False 8306.336464756441 7926.2562091491345 8386.592523533314 8491.80594167833 8570.094598648717 8269.998906821933 8350.118821845697 8679.360132602398 8241.829017129421 8238.839025189503 7668.2803308810435 1.0832071998340844 1.0336419467125104 1.0936731785560245 1.1073937799953473 1.117603195091338 1.0784685157528344 1.08891674033079 1.1318522221533323 1.0747949555180751 1.0744050386382922 1.0 12.904687363527742 -10.17854888105676 0.786764190909367 1.003164614367851 1.090565823090994 0.180897549496969 0.03198437320786883 0.29603660538816834 0.3567729302870473 0.01368948790340015 0.0052585747055131525 6.62904731692833e-11 10.17854888105676 0.08740120872314305 LQINSPPFDQPMS(ph)R ddPTM_A549_MK2206_60min_R1 1 LQINSPPFDQPMSR 14 0 Q00537;Q00537-2;F5H6Z0;F8VQZ9 Q00537 CDK17 Cyclin-dependent kinase 17 1 LQINS(0.062)PPFDQPMS(0.938)R 60.518 0.0024747 1864700.0 840.39 1270.8 1193.5 1115.7 1501.1 1081.2 1065.8 1244.8 1553.2 1557.7 1591.2 True False 982.2272864371611 1335.4782919743377 1362.756246525 1389.0465500856756 1280.2901784951457 1195.6118663575253 1259.4420640613412 1421.2542120401179 1201.4026799507324 1205.814488130365 1196.0611251141022 0.8212183021527919 1.116563580182355 1.1393700688959316 1.1613508046699226 1.0704220307912844 0.9996243847850719 1.0529913878282706 1.1882789116689438 1.004465954727958 1.008154569036204 1.0 10.224075405507127 -8.942236791774807 24.99980083661241 1.001969178926447 1.0744539750531819 0.08348016852810625 0.09377986953248635 127.8503010799728 55333.10131103989 0.015637118586294588 0.01664655564020381 1.142255369411864e-09 8.942236791774807 0.07248479612673475 LQINSPPFDQPMS(ph)R ddPTM_A549_PD325901_60min_R1 1 LQINSPPFDQPMSR 14 0 Q00537;Q00537-2;F5H6Z0;F8VQZ9 Q00537 CDK17 Cyclin-dependent kinase 17 1 LQINS(0.178)PPFDQPMS(0.822)R 53.683 0.0068948 9032500.0 3678.4 3936.2 3468.6 3587.9 4191.7 3457.7 3417.6 3396.1 3251.8 3861.6 4229.0 True False 4051.828460105043 4267.917388095104 3704.0000543862266 3809.5164342878875 3897.289452579967 3429.5416375967798 3547.6586381824773 3328.362121311089 3115.138154439109 3617.7779169752216 3708.8598098397624 1.092472799687756 1.150735699627184 0.9986896901736101 1.0271395063736513 1.050805275044447 0.9246889376886288 0.956536191734826 0.8974084467902516 0.8399180109678223 0.9754420772058041 1.0 11.856760021505076 -6.70483475356407 0.820221207385842 0.9211338953452965 1.1104439477024097 0.6060734162730329 0.052930270822251026 0.42965179439714835 0.5141030387199517 0.011418360664189272 0.04703621951327485 1.973173373889567e-07 6.70483475356407 0.18931005235711318 LQIPEEEREAVATIMS(ph)GSK ddPTM_A549_PD325901_60min_R1 2 LQIPEEEREAVATIMSGSK 19 1 O43663-2;O43663-4;O43663;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 LQIPEEEREAVAT(0.002)IMS(0.788)GS(0.211)K;LQIPEEEREAVAT(0.002)IMS(0.965)GS(0.033)K 120.08 1.0906e-14 6440500.0 3189.3 3190.1 3413.7 3447.3 4214.7 3831.1 3702.4 3929.7000000000003 4218.5 4113.200000000001 3528.6 True False 3513.0753881614305 3458.9409226569237 3645.374210245704 3660.2318916136574 3918.6740119256583 3799.900791797156 3843.2968580310185 3851.319050709986 4041.2111152289167 3853.4918500368985 3094.604569638352 1.1352259421538897 1.1177327651465174 1.1779773887788567 1.1827785454480237 1.266292323863404 1.2279115816859367 1.2419347194592172 1.2445270353750129 1.305889338779458 1.2452291604052124 1.0 11.595539357472001 -10.938728500319222 1.2014986048487701 1.000171443634796 1.2190102280896462 0.0 0.08862763765686628 0.2460276049181484 0.6319856029143177 0.0441662800001329 0.010388447332064765 1.1515200380151214e-11 10.938728500319222 0.21883878445485028 LQIT(ph)PDSNGEQFSSLIQR ddPTM_A549_PD325901_60min_R1 1 LQITPDSNGEQFSSLIQR 18 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3;K7ERN1 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 LQIT(0.898)PDS(0.095)NGEQFS(0.003)S(0.004)LIQR 75.46300000000001 0.00051726 3294500.0 1172.3 1277.9 1160.2 1128.6 1256.0 1135.8 1519.3 1389.4 1305.3 1493.9 1381.9 True False 1291.3110329983526 1385.5931177904392 1238.938148849363 1198.3110587634292 1167.7828929647735 1126.5504213732904 1577.117792892861 1361.6873270367864 1250.4427803030228 1399.5748990494315 1211.935060585852 1.0654952356722234 1.143289902943018 1.0222809696176771 0.9887584720786633 0.9635688668007218 0.9295468528063818 1.3013220296890156 1.1235645962569512 1.0317737484206093 1.154826644236923 1.0 10.24309668126111 -8.97454775573334 9.77389667036905 1.0139524797759498 1.0661804193588507 0.0 0.10518014863783798 0.7012256189864494 249.7760167882163 0.017680527095046118 0.01835250608948858 1.0603573333303749e-09 8.97454775573334 0.05222793958290084 LQIWDTAGQERFRSVT(ph)HAYY(ph)RDAQALLLLYDITNK ddPTM_A549_MK2206_60min_R1 1 LQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNK 35 3 A8MSP2;A8MTC6;A8MZI4;B7Z3L0;Q96AX2-4;Q96AX2-2;Q96AX2;Q96AX2-3 A8MSP2 RAB37 Ras-related protein Rab-37 2 LQIWDT(0.003)AGQERFRS(0.195)VT(0.757)HAY(0.036)Y(0.724)RDAQALLLLY(0.236)DIT(0.05)NK 42.015 0.012922 142140000.0 1710.6 2306.1 2320.9 2505.0 2805.0 2019.9 2136.0 1784.2 3596.9 3885.1 3071.0 True False 1999.3074598453181 2423.4706398505036 2650.0385191117484 3118.7251124537247 2392.388215761031 2233.644477298894 2524.0835511681616 2037.1158138833375 2782.2078930690113 3007.4532116808637 2308.385944711794 0.8661062351490514 1.0498550493267182 1.1480049621609572 1.3510414580362138 1.0363900461453057 0.9676217629100876 1.0934408767088981 0.8824849321882676 1.2052611477048198 1.3028381231355788 1.0 11.17266873653662 -11.328290263719616 1.9421264662904396 0.9994949140734917 1.0935698508132312 0.0 0.16192750644089682 0.9228763782020263 6.287220400892714 0.10696388155203346 0.020649021582662807 4.695801565566617e-12 11.328290263719616 0.09407493673973955 LQKLES(ph)PVAH ddPTM_A549_MK2206_60min_R1 2 LQKLESPVAH 10 1 Q86TM6-2;Q86TM6-3;Q86TM6 Q86TM6-2 SYVN1 E3 ubiquitin-protein ligase synoviolin 1 LQKLES(1)PVAH;LQKLES(1)PVAH 75.045 0.00043835 20758900.0 1837.06 1873.42 1900.42 1817.65 2505.3 1629.5 1931.85 1532.98 2754.1 2536.2 2560.4 True False 2147.1108161951606 1968.769075976207 2169.928132401374 2262.9743315974097 2136.7736887508413 1801.9326084254421 2282.8421387285625 1750.2846095543543 2130.300747393967 1963.2706585326011 1924.5820165548944 1.1156244824726176 1.0229593018334495 1.1274802080327355 1.1758263935398585 1.110253379887536 0.9362721842590002 1.1861495738253718 0.9094362279698831 1.106890082661855 1.020102360743743 1.0 10.910329437939058 -7.095076582739679 24.998355712530557 1.0432340650654248 1.110180628550561 0.20390058343150863 0.07889570689180957 76.72238008333821 20166.170118980102 0.011275057088628419 0.01952898220317809 8.033844422676647e-08 7.095076582739679 0.06694656348513628 LQKLES(ph)PVAH ddPTM_A549_PD325901_60min_R1 2 LQKLESPVAH 10 1 Q86TM6-2;Q86TM6-3;Q86TM6 Q86TM6-2 SYVN1 E3 ubiquitin-protein ligase synoviolin 1 LQKLES(1)PVAH;LQKLES(1)PVAH 87.618 0.00020103 45927000.0 3845.3 3583.1000000000004 4013.7 3699.3999999999996 4034.4 4139.6 4106.9 4074.5 3913.9 3646.0 3969.6000000000004 True False 4235.672025239758 3885.060411890544 4286.09381833881 3927.903536053012 3751.0376619244275 4105.888470080005 4263.1903268819115 3993.2309011165835 3749.412393953881 3415.790937769747 3481.3643653676795 1.2166701271995164 1.1159591482404998 1.2311534698799447 1.128265565973923 1.0774619569383301 1.1793906179212492 1.2245745861282924 1.1470304403758795 1.076995108944275 0.9811644456839246 1.0 11.765437101481343 -9.143787130653493 1.1048290613565481 1.0201074722914025 1.165189782634809 0.6497431705639363 0.04854143588011092 0.20086609796905242 0.5090568950833756 0.011532077660459331 0.010232620720895112 7.181462042261847e-10 9.143787130653493 0.14508231034340646 LQKS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 LQKSPEK 7 1 Q5T670;Q7L590-2 Q5T670 MCM10 Protein MCM10 homolog 1 LQKS(1)PEK 48.64 0.01577 11405000.0 5946.6 6538.7 5079.1 4195.3 4470.2 4334.1 4782.5 5280.0 4849.4 8824.5 9097.7 True False 6950.240699588551 6871.4919009541945 5799.392753854313 5223.148688334173 3812.639501638133 4792.731585257259 5651.418344317291 6028.456169321838 3751.0186429005144 6831.039321118582 6838.4900062534925 1.016341428185589 1.0048259037697684 0.8480516530039568 0.7637868423523084 0.5575265150861732 0.7008464706206372 0.8264131905068695 0.8815478510327698 0.5485156283726927 0.9989104780253978 1.0 12.739462086237737 -5.871573461791259 2.81224093418767 0.7688659358364635 1.0184141598449248 0.2656950965004907 0.14156886640180444 0.3015584452057282 4.699322593028684 0.02417458054351384 0.09744006074271026 1.34408439284404e-06 5.871573461791259 0.24954822400846133 LQKS(ph)QSSDLLER ddPTM_A549_MK2206_60min_R1 2 LQKSQSSDLLER 12 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 LQKS(0.951)QS(0.047)S(0.003)DLLER;LQKS(0.991)QS(0.008)S(0.001)DLLER 134.76 1.1596e-08 61492000.0 13584.4 15096.300000000001 13219.0 11613.3 12249.099999999999 8905.400000000001 6362.8 7531.8 10170.599999999999 12369.1 11553.5 True False 15877.114613306872 15864.637188489294 15093.652972613292 14458.559021340838 10447.273616284645 9847.763517073912 7518.838398582759 8599.455715170114 7866.975339110816 9574.911719286962 8684.447089621524 1.8282240019955962 1.8267872467607709 1.7380096645014032 1.6648796258566363 1.2029866160126432 1.133954000231359 0.8657820493337172 0.9902133810507083 0.9058694535098682 1.1025355581623153 1.0 13.084218284840885 -6.843490672903653 1.388857852749449 0.953109649084503 1.8258152290420713 0.9593148821201127 0.07416599200608295 0.04156927044407313 0.16018730371903472 0.009099334043266585 0.023067384597731444 1.433868510106138e-07 6.843490672903653 0.8727055799575683 up LQLATLEAGPGAAGAGS(ph)E ddPTM_A549_PD325901_60min_R1 1 LQLATLEAGPGAAGAGSE 18 0 C9JI98 C9JI98 TMEM238 Transmembrane protein 238 1 LQLATLEAGPGAAGAGS(1)E 110.38 2.4800999999999997e-09 673970.0 646.39 585.68 728.78 774.11 767.07 1018.1 1080.2 796.76 818.83 1093.2 1113.4 True False 712.0110369528319 635.037309044139 778.2393933101522 821.925016568632 713.1936494478412 1009.8089311499791 1121.3076021081213 780.8679967538718 784.4174226580284 1024.1751654333202 976.4588584241178 0.7291766886133108 0.6503472251447537 0.7970017237245746 0.8417405500269781 0.7303878123435188 1.034154099210779 1.1483408567953095 0.7996936993475535 0.8033286972520068 1.0488666845485026 1.0 9.931415449454747 -6.508511152727757 1.1797972955465343 0.919226024162814 0.6999484243378161 0.41370530955683293 0.11689789749313137 0.46628319928344875 1.217142393320044 0.01928342522229291 0.07133861962149059 3.100907755874088e-07 6.508511152727757 -0.21927759982499784 LQLELS(ph)KVR ddPTM_A549_MK2206_60min_R1 1 LQLELSKVR 9 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LQLELS(1)KVR 65.395 0.0016285 2479600.0 847.1 655.5 926.5 1006.7 1574.4 910.59 998.07 1056.0 1341.7 1024.7 1323.3 True False 990.0697703934111 688.8621501331273 1057.8916316760892 1253.3415451924805 1342.8078455950692 1006.9480293992777 1179.4063997726626 1205.6912338643683 1037.8070922546333 793.2195583149426 994.6880887779611 0.9953570185099694 0.6925408657295165 1.0635410674071486 1.26003473785666 1.349978813202434 1.0123254121162533 1.1857047581836835 1.2121299606046738 1.043349270955528 0.7974555715143471 1.0 9.958100390486758 -5.8654926198523505 8.351403833437981 1.0847762123396119 0.8451060484741324 0.2837340570892819 0.15670795483616848 0.21096690532558945 15.103623243814312 0.019644098491323016 0.061527923485102456 1.3630361686543332e-06 5.8654926198523505 -0.23967016386547946 LQLELS(ph)KVR ddPTM_A549_PD325901_60min_R1 2 LQLELSKVR 9 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LQLELS(1)KVR;LQLELS(1)KVR 84.71799999999999 0.0003711 7202800.0 3261.4 3293.3999999999996 3732.2 2625.4 3627.3 2592.8999999999996 3398.2 3321.0 3451.3 3455.7 3946.8 True False 3592.494927084217 3570.9463761883035 3985.4895355417952 2787.564995283987 3372.530961505669 2571.7842820732553 3527.520360566393 3254.760049725899 3306.2538632190476 3237.5065122465494 3461.3686208265713 1.037882791641629 1.031657349264224 1.151420138138903 0.8053360680834737 0.9743345280284861 0.7429963588966482 1.019111440296129 0.94031015077171 0.9551868712640948 0.9353255509300353 1.0 11.75712687514547 -6.2398508163094 24.987320225385936 0.9520782381579238 1.0694538049521556 0.3435197298283966 0.0863957026451922 836.9101794549211 968666.5280863335 0.011763477445074765 0.031091526511054877 5.756376395951413e-07 6.2398508163094 0.11737556679423178 LQLELS(ph)KVREEFK ddPTM_A549_MK2206_60min_R1 2 LQLELSKVREEFK 13 2 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LQLELS(1)KVREEFK;LQLELS(1)KVREEFK 150.59 1.4921e-13 38728000.0 4828.0 5443.799999999999 4967.3 4849.299999999999 6649.5 5559.6 4872.0 4657.9 6457.6 8033.0 7400.4 True False 5642.848366732844 5720.866167650213 5671.737832730318 6037.3787176933465 5671.367358539383 6147.913181836202 5757.179335810524 5318.171589220493 4994.963910668198 6218.339720839201 5562.676439350423 1.0144124736098767 1.028437700812644 1.0196059207413888 1.085337028590208 1.0195393207521615 1.1052077626420638 1.0349657037544349 0.9560454660996818 0.8979425578906187 1.11786831188861 1.0 12.441563476372556 -8.248536852995146 5.0154606463182665 0.950583517241379 1.0458753661705056 0.0 0.061046176934664347 0.11544588279333659 8.824833973200109 0.007141526506423614 0.00903943837195954 5.642390595909681e-09 8.248536852995146 0.09529184892912657 LQLELS(ph)KVREEFK ddPTM_A549_PD325901_60min_R1 2 LQLELSKVREEFK 13 2 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LQLELS(1)KVREEFK;LQLELS(1)KVREEFK 140.81 5.766899999999999e-13 64019000.0 4757.6 5745.7 5778.6 5032.5 6545.5 5795.3 5770.8 5041.6 5440.4 5772.9 6373.4 True False 5240.588049639992 6229.910303535905 6170.7705455446685 5343.346095363249 6085.766660749138 5748.104998225589 5990.410951902927 4941.041332941313 5211.758907500627 5408.39810879072 5589.512204311361 0.9375752047911744 1.1145713750710815 1.103990888647665 0.9559592859000763 1.0887831421237442 1.0283732798350276 1.071723387111015 0.8839843536132076 0.9324174842092015 0.9675975131817509 1.0 12.448506669496613 -8.237183817448328 24.879839573457975 0.9608866891242919 1.045946450924364 0.3708116950848015 0.05956521279320192 665.0351379389255 682152.5236147494 0.009496891514801382 0.012257126946253081 5.791835020442453e-09 8.237183817448328 0.08505976180007202 LQLELSK ddPTM_A549_MK2206_60min_R1 2 LQLELSK 7 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 95.09899999999999 0.033068 5455100.0 2239.5 3065.1000000000004 2865.1 2272.8999999999996 3325.3999999999996 2887.2 2580.3999999999996 2430.16 4099.6 3574.6000000000004 3059.3999999999996 False True 2617.4728494818137 3221.1004978993883 3271.414262185819 2829.7606020343565 2836.2380651307417 3192.7215876317487 3049.225278761385 2774.6426220528692 3171.0471457159565 2767.09537733248 2299.6665448555073 1.1381966900102358 1.4006815488555 1.4225602705332083 1.2305090963577747 1.2333257930266357 1.3883411030934287 1.325942356983314 1.2065412823697905 1.3789160662487265 1.203259395812249 1.0 11.167208968023099 -10.84301356258464 0.9081905646372479 0.9849692610171874 1.3105389018940394 0.2864377230596722 0.10527509307141937 0.3286177746939696 0.44325784462970025 0.07526884869211278 0.015315639925454212 1.4354446051466323e-11 10.84301356258464 0.32556964087685203 LQLELSK ddPTM_A549_PD325901_60min_R1 2 LQLELSK 7 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 109.21 0.024211 10062000.0 4471.2 4263.4 3862.7 4294.9 5309.2 4840.1 4769.4 4681.7 4720.200000000001 4753.2 4802.8 False True 4925.112932476526 4622.691680403598 4124.846050302042 4560.18621857439 4936.300107745676 4800.683830330038 4950.902126915821 4588.319820777401 4521.826408937663 4453.082140813813 4212.086047457652 1.1692811773038791 1.0974827266868827 0.9792881730874737 1.0826431766100424 1.171937147562583 1.1397402085903858 1.175403842925789 1.089322432894465 1.073536095414519 1.0572153775209845 1.0 12.040319193716224 -9.680696012919936 0.8236455376075779 1.0099661852999233 1.1110099646245728 0.2406139005043182 0.055357366900439076 0.4577197198674627 0.6552753753550788 0.02077185272410875 0.012269583357941677 2.0859504460013498e-10 9.680696012919936 0.10104377932464947 LQLERPVS(ph)PETQADLQR ddPTM_A549_MK2206_60min_R1 2 LQLERPVSPETQADLQR 17 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 LQLERPVS(1)PETQADLQR;LQLERPVS(0.812)PET(0.188)QADLQR 156.05 1.1673e-22 48934000.0 8522.3 9265.2 9962.2 8856.8 12248.0 8471.9 9884.599999999999 9296.9 13816.400000000001 13112.0 14774.4 True False 9960.655889769527 9736.75910513112 11374.989760478722 11026.71639759686 10446.335424827494 9368.390834807919 11680.503871665167 10614.76404556216 10687.007460257073 10149.990093320504 11105.508727303784 0.8969112657829402 0.8767503897585993 1.0242655280178563 0.9929051129811634 0.9406444748581702 0.8435805206991533 1.0517756690378093 0.9558106977544316 0.9623158850870296 0.9139599402921488 1.0 13.43898786172275 LQLERPVS(ph)PETQADLQR ddPTM_A549_PD325901_60min_R1 2 LQLERPVSPETQADLQR 17 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 LQLERPVS(0.997)PET(0.003)QADLQR;LQLERPVS(0.951)PET(0.049)QADLQR 187.07 6.2377e-40 71612000.0 9829.4 9649.6 10197.099999999999 10719.0 12393.0 10216.599999999999 10989.6 11303.6 11911.5 12161.5 12351.3 True False 10827.273451978175 10462.805657274143 10889.136526143619 11381.088285384734 11522.55843352901 10133.399396902936 11407.815241739863 11078.140830497343 11410.901078357054 11393.620814505428 10832.168401341649 0.9995481099275684 0.9659013107641718 1.0052591616647055 1.050674976948761 1.0637351642448478 0.9354913089836967 1.0531423459338867 1.0227075891033257 1.0534272230243138 1.0518319502025317 1.0 13.40303445247935 -5.9954466158557445 9.129134994193524 1.025347835438409 0.9833501316546782 0.2036637060598523 0.03524985317626501 0.14802418600969985 150.1870319574125 0.004789135814753149 0.014333217470340501 1.010539709986141e-06 5.9954466158557445 -0.04199770378373069 LQLKQS(ph)K ddPTM_A549_PD325901_60min_R1 2 LQLKQSK 7 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 LQLKQS(1)K;LQLKQS(1)K 59.426 0.008460500000000001 38132000.0 14385.3 17787.1 18365.5 16799.4 21448.1 18662.7 19256.5 19003.0 20364.4 18427.8 22208.1 True False 15845.685066101858 19286.081340832876 19611.89327072311 17837.060783794404 19941.659447928138 18510.717158798467 19989.316645061135 18623.97025743489 19508.555087108616 17264.26556309198 19476.644488744954 0.813573666411515 0.9902158121732827 1.006944152112871 0.9158179579702231 1.0238755171329386 0.9504058653170636 1.0263224066451715 0.9562206810417059 1.0016384032876968 0.8864086199791011 1.0 14.249457525325216 -5.261596331140903 7.381969748642904 0.9925435112615814 0.8114775203528741 0.4817768736685939 0.045442095514193336 0.036228015087745334 17.89772328588286 0.003924640932963219 0.032578304661328335 5.475246406958867e-06 5.261596331140903 -0.18106599090870723 LQLQGLDLS(ph)SR ddPTM_A549_MK2206_60min_R1 2 LQLQGLDLSSR 11 0 P49454 P49454 CENPF Centromere protein F 1 LQLQGLDLS(0.85)S(0.15)R;LQLQGLDLS(0.984)S(0.016)R 99.5 0.00027317 6958400.0 1115.21 1030.5900000000001 1272.7800000000002 853.1800000000001 2231.3999999999996 1561.13 1314.33 1449.92 2740.4 1347.16 1689.38 True False 1303.4301837332494 1083.0426289942018 1453.2793426494266 1062.2091383007064 1903.164015917705 1726.3277404057737 1553.1267480369138 1655.4506001937723 2119.7037755195643 1042.8356203567466 1269.8603214839502 1.0264358698995095 0.852883274381363 1.1444403121054558 0.8364771466041367 1.49871917699868 1.359462699321449 1.2230689641691777 1.303647788805011 1.66924167930729 0.8212207301178573 1.0 10.310454100884115 -6.757869012681308 24.99995593620139 1.3286004935098092 0.9698595139377205 0.2608392162501084 0.231252553953975 86.41460825772702 605071.00934728 0.03553433204148165 0.07173058190006268 1.746348788790475e-07 6.757869012681308 -0.3587409795720887 LQLQGLDLS(ph)SR ddPTM_A549_PD325901_60min_R1 2 LQLQGLDLSSR 11 0 P49454 P49454 CENPF Centromere protein F 1 LQLQGLDLS(0.977)S(0.023)R;LQLQGLDLS(0.963)S(0.037)R 90.73100000000001 0.0002982 3027700.0 2790.6 2486.3999999999996 2292.14 2857.8999999999996 2218.56 2357.41 2148.4900000000002 2751.7 3178.9 4213.5 3265.5 True False 3073.899657668858 2695.937654021558 2447.698404157539 3034.4259922381752 2062.7359992165016 2338.2120345567932 2230.2519626488383 2696.8151848331095 3045.3018879225297 3947.4588909195936 2863.864201710037 1.0733398796749536 0.941363648601701 0.8546838228907634 1.0595565217185559 0.7202632017205371 0.8164535291724473 0.7787561858963622 0.9416700635535787 1.0633541513959197 1.378368041530228 1.0 11.483747369385638 -8.57852625114264 5.4577680141478355 1.0293452550591433 0.887471029737125 0.2871632872832418 0.14675771657718428 0.19003539713466078 11.953427733501544 0.017482699880026445 0.019917513257267917 2.6392087892765224e-09 8.57852625114264 -0.14187422532201832 LQLRAS(ph)VK ddPTM_A549_MK2206_60min_R1 2 LQLRASVK 8 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 LQLRAS(1)VK;LQLRAS(1)VK 66.595 0.0023438 14275900.0 3342.9 4101.7 4507.9 3243.4 4808.8 3915.8999999999996 4500.5 3391.1000000000004 5209.6 5419.799999999999 5469.3 True False 3907.0997939418435 4310.459010222804 5147.188004784284 4038.0331456017584 4101.43189017884 4330.277938835954 5318.182594584416 3871.798809808197 4029.633918021717 4195.463415785423 4111.121864999092 0.9503731395572984 1.0484872868695065 1.25201542883123 0.982221709353938 0.9976429852632805 1.0533080947326552 1.2936085986314079 0.9417864361481417 0.9801786593408626 1.0205154586888778 1.0 12.005316422660755 LQLRAS(ph)VK ddPTM_A549_PD325901_60min_R1 2 LQLRASVK 8 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 LQLRAS(1)VK;LQLRAS(1)VK 87.29799999999999 0.00075677 17873000.0 4881.9 4875.0 5069.4 5784.4 6157.8 7199.4 5670.299999999999 6937.2 6272.1 6303.1 5779.200000000001 True False 5377.5068941351665 5285.833358813989 5413.439968778618 6141.689250674449 5725.29737125675 7140.770473353466 5886.086369407216 6798.832103871883 6008.5054488152855 5905.121190306226 5068.395037367216 1.0609881144798292 1.0429008236026769 1.0680777502281347 1.211762146674494 1.1296075639421277 1.4088819874353653 1.1613314128065184 1.3414171653446225 1.1854848338610187 1.1650870042232635 1.0 12.30731325906977 -4.275889743953792 15.042504141993945 1.1320235696404564 1.136410121158241 0.0 0.12291119367561432 0.0 0.0 0.018011436315118895 0.0 5.297979287012652e-05 4.275889743953792 0.004386551517784554 LQLS(ph)FQDDDSISR ddPTM_A549_PD325901_60min_R1 2 LQLSFQDDDSISR 13 0 Q8TEP8;K7ELX0 Q8TEP8 CEP192 Centrosomal protein of 192 kDa 1 LQLS(1)FQDDDSISR;LQLS(0.79)FQDDDS(0.209)IS(0.001)R 133.48 2.9954e-08 6583700.0 3645.3999999999996 3870.3 3627.5 3219.0 4082.3 4174.5 3860.3 4014.7 3659.5 4263.6 4787.6 True False 4015.4783243983575 4196.463763819033 3873.683963929546 3417.8303191205746 3795.573331170453 4140.504256051062 4007.2058289372117 3934.623659028779 3505.7039412540516 3994.3955683694744 4198.755551096911 0.9563496315829405 0.9994541746357967 0.9225790634364409 0.814010312705077 0.9039757816286474 0.986126533365194 0.9543794060338526 0.9370928150367961 0.8349388047461344 0.9513284400007406 1.0 12.035746082483502 -5.779718833972324 21.289034825678055 0.9196495386204429 0.9779017945504029 0.12958375781530895 0.054696000768696657 68.13796557930493 79359.33915399274 0.009560213844175299 0.029872649783030145 1.6606616863195135e-06 5.779718833972324 0.058252255929960084 LQLS(ph)PWESSVVNR ddPTM_A549_MK2206_60min_R1 2 LQLSPWESSVVNR 13 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LQLS(0.992)PWES(0.006)S(0.002)VVNR;LQLS(0.997)PWES(0.002)S(0.001)VVNR 126.1 1.6566e-06 10760500.0 2905.2 3023.6000000000004 2077.81 2347.6 4285.6 3398.5 3077.2 3342.0 5232.1 4258.3 4233.6 True False 3395.5267346794203 3177.488325160217 2372.4747017948125 2922.762105387767 3655.1939170999894 3758.12701425828 3636.2874080780284 3815.7387344457534 4047.0377039468385 3296.3470724822077 3182.280278584125 1.0670105827982486 0.9984941761867562 0.7455266331381676 0.9184489892537612 1.1486084182145877 1.1809541225986429 1.1426672353624057 1.1990580339904786 1.2717414399926663 1.0358443581056391 1.0 11.63584519095206 -6.761365453375442 24.99999830548893 1.1428440228927126 0.9237472498424879 0.49588741938680025 0.10046061740490485 1.48202626882384 500772.3918363674 0.017525268959456542 0.03472436308440708 1.732345637054356e-07 6.761365453375442 -0.21909677305022468 LQLS(ph)PWESSVVNR ddPTM_A549_PD325901_60min_R1 2 LQLSPWESSVVNR 13 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LQLS(0.853)PWES(0.119)S(0.028)VVNR;LQLS(0.935)PWES(0.056)S(0.01)VVNR 170.11 1.1942e-21 14461300.0 6832.5 7161.9 6412.1 5959.4 6286.0 6922.2 6015.1 6168.7 7181.5 7612.5 8660.7 True False 7526.130370179343 7765.458447690238 6847.263665089638 6327.49860322061 5844.493045522742 6865.827898248098 6244.007922089017 6045.660439248468 6879.686529338974 7131.845450842626 7595.488804700698 0.9908684699161915 1.0223777096326374 0.9014908508392511 0.8330600921042298 0.7694689829449424 0.9039349638694711 0.8220679514693937 0.7959540978464649 0.9057595509957531 0.9389580623736642 1.0 12.890927096450126 -10.020967706271335 0.9955590160220855 0.9887127358309147 0.8803928563119171 0.15401569850608776 0.07502929268995372 0.5242580385097736 1.0486676469438116 0.029627066442615178 0.01539610021250178 9.528670156832834e-11 10.020967706271335 -0.10831987951899757 LQLWDTAGQER ddPTM_A549_MK2206_60min_R1 2 LQLWDTAGQER 11 0 P20340-2;P20340;C9JB90;C9JU14;J3KR73;P20340-4;Q9NRW1-2;Q9NRW1;Q14964 P20340-2 RAB6A;RAB6B;RAB39A Ras-related protein Rab-6A;Ras-related protein Rab-6B;Ras-related protein Rab-39A 0 ; 97.456 0.00077282 4105500.0 4506.0 4944.4 4718.6 3853.2 6173.3 3901.4 4236.9 4402.299999999999 6455.9 6128.7 7350.7 False True 5266.502638877006 5196.048840760083 5387.768433056444 4797.234172976719 5265.215747721063 4314.2435584602745 5006.689886678083 5026.339506478318 4993.648957953858 4744.222413432992 5525.318321000643 0.9531582314199112 0.9404071474055945 0.9751055269664015 0.8682276557249887 0.9529253233626411 0.7808135763079365 0.9061360080646655 0.9096922954419105 0.9037757949571856 0.8586333198941932 1.0 12.431841867157118 -10.609151908826282 0.8458416880476712 1.0011622641910822 0.9088853149964746 0.0 0.06480954020828525 0.6175174873066637 0.7732604924126897 0.03576229190616104 0.009275516124869357 2.459507159881832e-11 10.609151908826282 -0.0922769491946076 LQLWDTAGQER ddPTM_A549_PD325901_60min_R1 2 LQLWDTAGQER 11 0 P20340-2;P20340;C9JB90;C9JU14;J3KR73;P20340-4;Q9NRW1-2;Q9NRW1;Q14964 P20340-2 RAB6A;RAB6B;RAB39A Ras-related protein Rab-6A;Ras-related protein Rab-6B;Ras-related protein Rab-39A 0 ; 125.97 6.0114e-06 7912200.0 4497.0 4297.5 4128.1 4445.7 4619.8 4578.9 3691.2 3706.4 5081.0 5103.5 5329.0 False True 4953.532129483572 4659.665407077562 4408.257690281892 4720.300792082738 4295.321185444792 4541.610956529455 3831.6706359021455 3632.472944385451 4867.46323965346 4781.264139031242 4673.566783314283 1.0599040003384204 0.9970255317017502 0.9432319884719297 1.0099996450110236 0.9190670390717608 0.9717654988357197 0.8198600370025946 0.777237838422299 1.0414878967882586 1.023043932120851 1.0 12.19030829423631 LQMEAPHIIVGT(ph)PGR ddPTM_A549_PD325901_60min_R1 1 LQMEAPHIIVGTPGR 15 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;J3KS25;J3QLN6;J3QKZ9 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 1 LQMEAPHIIVGT(1)PGR 73.783 0.00068044 1339800.0 551.54 365.91 269.59 355.33 403.65 597.15 403.4 350.51 430.02 435.85 370.71 True False 607.5319347777119 396.7465198612567 287.8859985763659 377.27792708701867 375.29901651690324 592.2870083844515 418.75160774895 343.5188030802242 411.9477548348318 408.3303566173738 325.11502012430805 1.868667693499431 1.220326639198522 0.8854896905910173 1.1604444695996083 1.1543576681674297 1.8217768227318134 1.2880106480126323 1.056606990808605 1.2670831223894952 1.255956604100445 1.0 8.34480639901212 -10.86990247626527 0.3831291190065793 0.8884569289710199 1.3110539745636247 0.030205887172201074 0.29054637198589467 4.615497645618684 0.7884434590382117 0.804828337548494 0.09296294217516392 1.3492658352557767e-11 10.86990247626527 0.4225970455926048 LQMEAPHIIVGTPGR ddPTM_A549_MK2206_60min_R1 3 LQMEAPHIIVGTPGR 15 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;J3KS25;J3QLN6;J3QKZ9 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ;; 59.673 0.006684999999999999 5751000.0 1351.67 1397.44 1818.27 1425.04 2000.8200000000002 1445.38 1358.3200000000002 1524.65 2288.3 2074.5 2253.34 False True 1579.7988508412973 1468.5637270511625 2076.128027121081 1774.174863972477 1706.5020284702268 1598.329152234407 1605.109161621131 1740.7738065448 1770.003703664215 1605.869009197178 1693.7734889797707 0.9327096339150254 0.8670366708453671 1.2257412461754953 1.047468788191469 1.0075149006483288 0.9436498815418031 0.9476527836009254 1.0277488801606758 1.0450061446707144 0.9481013958746389 1.0 10.726025238331346 LQMEAPHIIVGTPGR ddPTM_A549_PD325901_60min_R1 4 LQMEAPHIIVGTPGR 15 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;J3KSZ0;J3QR64;J3KS25;J3QLN6;J3QKZ9 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ;;; 84.14 0.00020242 16551600.0 4994.599999999999 4736.61 4607.0599999999995 4855.5599999999995 6282.79 5832.02 4668.51 5388.72 5623.9 5366.17 6101.5599999999995 False True 5501.64811516981 5135.780747834242 4919.722796102347 5155.476913423145 5841.50850484884 5784.525962720066 4846.172702756696 5281.237752230938 5387.547040639061 5027.349110403701 5351.106800975621 1.028132743335779 0.9597604643020542 0.9193841534251151 0.9634412291085633 1.0916449105040864 1.0809961710473472 0.9056393159398604 0.9869430659219988 1.006809850937155 0.9394970605870001 1.0 12.385621608163174 LQMPS(ph)FK ddPTM_A549_MK2206_60min_R1 2 LQMPSFK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 LQMPS(1)FK;LQMPS(1)FK 76.827 0.017503 9067600.0 1572.24 2782.1000000000004 1900.6599999999999 1140.49 2562.5 2202.28 1537.25 1871.43 2439.3 2298.0 2297.3999999999996 True False 1837.5956744225446 2923.6970066901204 2170.2021680102257 1419.9101011985413 2185.559644523224 2435.3238078448503 1816.5484265136956 2136.710933514008 1886.8024447616665 1778.880203969686 1726.8921749856308 1.0641056234086155 1.6930396981585998 1.256709712074689 0.8222343709504365 1.2656028420196008 1.4102350124234677 1.0519176893767619 1.237315777131127 1.0926000314856752 1.0301049652879963 1.0 10.753962290244699 -2.000000003243007 0.06608692967936773 0.7178094780373732 2.2681137306743397 0.13828950308217725 0.2080923598343136 270.5449095939223 1.289625816133616 5.515292430963746 39.366097906860155 0.009999999925327 2.000000003243007 1.5503042526369666 LQMPS(ph)FK ddPTM_A549_PD325901_60min_R1 7 LQMPSFK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 LQMPS(1)FK;LQMPS(1)FK;LQMPS(1)FK;LQMPS(1)FK;LQMPS(1)FK;LQMPS(1)FK;LQMPS(1)FK 107.57 0.0092056 48912400.0 22166.9 24491.5 25274.199999999997 23571.6 27935.199999999997 26886.6 25294.500000000004 27326.3 24043.0 26544.500000000004 31385.500000000004 True False 24417.267369590703 26555.484657926725 26989.45919811114 25027.564197012285 25973.127923208216 26667.644443823832 26257.096039181517 26781.255509432343 23032.55632178471 24868.47573988728 27525.28246907683 0.8870850788551284 0.9647670169329009 0.9805334142685854 0.9092573064465153 0.9436098594950888 0.9688418083913759 0.9539264880816373 0.9729693251838429 0.8367782001024165 0.90347758530092 1.0 14.748469748594147 LQMYFQS(ph)PKR ddPTM_A549_MK2206_60min_R1 1 LQMYFQSPKR 10 1 H7C4Y3;A0A3B3ITD5;Q460N5-4;Q460N5-1;Q460N5 H7C4Y3 PARP14 Poly [ADP-ribose] polymerase 14 1 LQMY(0.001)FQS(0.999)PKR 45.257 0.020052 1358100.0 861.11 873.12 919.93 757.48 1791.5 973.26 989.28 718.54 1453.2 1434.1 1700.7 True False 1006.4443158817966 917.5580786029535 1050.3899068837393 943.0626340045699 1527.9727231856994 1076.2497272022988 1169.0193705522654 820.3952454364609 1124.0525202835456 1110.1358139742938 1278.3692530678438 0.7872876428047069 0.7177566860286948 0.8216639318905729 0.73770753774107 1.1952514655048645 0.8418926883758379 0.9144614263420686 0.6417513902713694 0.8792862606684514 0.8683999644939663 1.0 10.320088899213966 -14.999999999999998 0.11190849490149758 1.5258307950975494 0.74998298007382 0.031276968773431335 0.14077670058987177 121.3796071897762 0.9590074748468987 14.575822675034136 0.6567476834065925 1.000000000000004e-15 14.999999999999998 -0.7758478150237293 LQMYFQS(ph)PKR ddPTM_A549_PD325901_60min_R1 1 LQMYFQSPKR 10 1 H7C4Y3;A0A3B3ITD5;Q460N5-4;Q460N5-1;Q460N5 H7C4Y3 PARP14 Poly [ADP-ribose] polymerase 14 1 LQMYFQS(1)PKR 53.967 0.0084171 2452800.0 1443.6 1409.1 1563.1 1297.0 1709.8 1781.7 1532.8 1748.1 1744.3 1671.1 1554.2 True False 1590.1532092778484 1527.8498022368797 1669.18136568388 1377.1127442992808 1589.7095464897832 1767.1904259207527 1591.1315427803443 1713.2327741420804 1670.9931369666458 1565.5864608082902 1363.043252885543 1.1666197722717286 1.120910726055423 1.2245989715661971 1.0103221166195224 1.1662942779874306 1.296503557153917 1.1673375290270074 1.2569173945985874 1.225928181977481 1.148596317463856 1.0 10.412615627974247 -10.798403642290728 1.0519196917807812 1.0002819440389181 1.1829399943216232 0.11827093132408018 0.08316806064854754 0.3750826038331948 0.7386422380865886 0.050201607314293656 0.012637761467576798 1.590729582747405e-11 10.798403642290728 0.1826580502827051 LQNAT(ph)PTNFK ddPTM_A549_MK2206_60min_R1 2 LQNATPTNFK 10 0 Q9NXF1-2;Q9NXF1 Q9NXF1-2 TEX10 Testis-expressed sequence 10 protein 1 LQNAT(0.5)PT(0.5)NFK;LQNAT(0.831)PT(0.169)NFK 106.67 0.00030382 35383000.0 7425.299999999999 9068.5 8402.2 8565.1 9134.7 8514.0 7963.4 7449.9 11892.4 13132.7 12130.6 True False 8678.50910884452 9530.047915304754 9593.758302934522 10663.549884501945 7790.9977306639175 9414.945828864204 9410.246700080777 8505.946139361886 9198.790388260422 10166.01394894373 9118.237232471794 0.9517748757335116 1.0451634095860571 1.0521505482188274 1.1694749338750472 0.8544412184099223 1.0325401268718666 1.0320247719119526 0.9328498395578674 1.0088342904154504 1.1149100083446613 1.0 13.15453922947107 -6.746300420529297 24.99998826419873 0.994461517322053 1.053786011892384 0.11666033749937088 0.07679667234153026 348.2585479058224 575099.5932926786 0.008995966369328071 0.01866940441417122 1.7934925602149608e-07 6.746300420529297 0.059324494570331066 LQNAT(ph)PTNFK ddPTM_A549_PD325901_60min_R1 2 LQNATPTNFK 10 0 Q9NXF1-2;Q9NXF1 Q9NXF1-2 TEX10 Testis-expressed sequence 10 protein 1 LQNAT(0.999)PT(0.001)NFK;LQNAT(1)PTNFK 154.67 1.8125e-08 57002000.0 21568.0 21527.0 23646.0 22807.0 26427.0 25435.0 24914.0 26417.0 24212.0 25952.0 26614.0 True False 23757.56748247759 23341.155839013085 25250.759754949155 24215.736591544883 24570.85868820066 25227.865792947363 25862.11590346391 25890.092211264408 23194.453839498045 24313.386291003975 23340.64672004621 1.0178624340375841 1.000021812547569 1.0818363371766575 1.0374921004544015 1.0527068501104504 1.0808554748091153 1.108029105348316 1.109227714287308 0.9937365539909138 1.0416757762809683 1.0 14.51055691518243 -8.792189298811504 24.877657426486536 0.9970422402544988 1.0608345767233933 0.25416752805252896 0.03513440504605487 133.00283231934426 107602.90857980153 0.006010596067598314 0.006399108028020174 1.6136550490053065e-09 8.792189298811504 0.06379233646889448 LQNEILK ddPTM_A549_PD325901_60min_R1 1 LQNEILK 7 0 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 0 83.265 0.01125 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LQPERGS(ph)PK ddPTM_A549_MK2206_60min_R1 4 LQPERGSPK 9 1 S4R3H4;Q9UKV3;E7EQT4;A0A087WYN3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK 116.03 5.4981e-05 2080963000.0 21471.100000000002 22559.8 24172.5 20524.0 26713.000000000004 21839.699999999997 21019.1 20966.700000000004 29991.3 31792.9 32677.799999999996 True False 25094.896762004446 23707.997459303297 27600.52397915842 25552.38092135738 22783.553086497126 24150.762557980448 24837.99839436268 23938.79393282578 23198.318436264726 24610.86180887199 24563.0003986008 1.0216543726243617 0.9651914291648911 1.1236625628492294 1.0402793024753172 0.9275557837712269 0.9832171219341821 1.0111956190733744 0.9745875318305749 0.9444415608765038 1.0019485164472788 1.0 14.584199177871382 -6.731261494225134 24.883364288503003 0.9742041642455286 1.0386584134031 0.3259674511157413 0.041408910733091484 171.86656064113947 141712.79265610327 0.005948215776366472 0.01238097776444694 1.856686184122809e-07 6.731261494225134 0.06445424915757147 LQPERGS(ph)PK ddPTM_A549_PD325901_60min_R1 6 LQPERGSPK 9 1 S4R3H4;Q9UKV3;E7EQT4;A0A087WYN3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK 90.913 0.00031822 3523268000.0 50007.6 47009.299999999996 49668.0 45017.2 50477.0 49155.799999999996 47746.0 49772.4 48197.100000000006 50478.799999999996 54138.4 True False 55084.33473835064 50970.93869015272 53038.76915794702 47797.810202520865 46931.6696561965 48755.49146235352 49563.00015761371 48779.65043630758 46171.543496930084 47291.55995323411 47479.7200115935 1.1601655343565687 1.073530734336823 1.1170826016875441 1.0066994959289923 0.988457169602871 1.026869818323455 1.0438772626610164 1.0273786455437537 0.9724476784120887 0.996037043640665 1.0 15.535023806966578 -2.0000000000007696 0.3516782819954353 0.9889653827461844 3.024624282527394 0.73285478682937 0.028585238639709815 19.011083571711104 0.23336295308580898 0.00778049316954209 26.097777759470794 0.00999999999998228 2.0000000000007696 2.0356588997812097 LQPGGSLNANTSNTIASTS(ph)ATTPVKK ddPTM_A549_PD325901_60min_R1 1 LQPGGSLNANTSNTIASTSATTPVKK 26 1 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 LQPGGSLNANTSNTIAS(0.003)T(0.009)S(0.545)AT(0.101)T(0.342)PVKK 151.35 3.5651e-33 8093800.0 1984.0 1638.0 2077.5 2644.0 2530.0 2331.8 1997.0 2850.7 2650.0 2212.6 1619.0 True False 2185.414219456394 1776.0400085614997 2218.4916430223666 2807.3138750403245 2352.3015280261734 2312.810593905825 2072.9969278003296 2793.8405521691116 2538.6297156232367 2072.8960583953212 1419.8732636865877 1.5391614697935367 1.2508440393828908 1.562457509244332 1.9771580653271532 1.656698233699119 1.6288852343770435 1.4599872966253047 1.9676689628728745 1.7879269795051194 1.4599162554925584 1.0 10.471546446778841 -10.776514701403825 1.0146241833698662 0.998280386370095 1.6524517616622343 0.24451622012052177 0.23938069136765744 0.31848113867819555 0.5798770898507046 0.14929252711481358 0.03735271527537612 1.6729590037145837e-11 10.776514701403825 0.6541713752921393 LQPGGSLNANTSNTIASTSATT(ph)PVKK ddPTM_A549_MK2206_60min_R1 1 LQPGGSLNANTSNTIASTSATTPVKK 26 1 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 LQPGGSLNANTSNTIASTS(0.004)AT(0.219)T(0.777)PVKK 120.42 2.0055e-17 7839300.0 1108.4 1156.0 1270.7 1276.4 2223.6 1664.7 1425.0 1825.5 2475.0 2523.0 1436.1 True False 1295.4708222217646 1214.835462324782 1450.9043673726997 1589.1180572997737 1896.5113855851093 1840.857449061573 1683.904054501231 2084.270215359284 1914.4164517628515 1953.0525477003987 1079.476735656335 1.2000914697194494 1.1253929076907314 1.344081182528248 1.472118856117423 1.756880276286832 1.705323874295734 1.559926211357762 1.9308153168229443 1.7734670776381882 1.8092585816709787 1.0 10.076116436114305 -4.291038226611957 10.37169320373183 1.4426593574894189 1.338640945453254 0.0 0.3059462121839428 81380497.17107622 36698695.2964677 0.049195015569063055 189559232.7064732 5.116367992734816e-05 4.291038226611957 -0.10401841203616491 LQPGGSLNANTSNTIASTSATT(ph)PVKK ddPTM_A549_PD325901_60min_R1 1 LQPGGSLNANTSNTIASTSATTPVKK 26 1 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 LQPGGSLNANTSNTIAS(0.06)T(0.06)S(0.06)AT(0.192)T(0.628)PVKK 94.495 5.8253e-09 12013000.0 1535.7 1375.8 1861.6 1251.0 1622.2 1275.5 1923.2 1875.7 2017.8 1478.1 1730.5 True False 1691.6031334774111 1491.74349437052 1987.9393707101979 1328.2714287728616 1508.2622682861895 1265.1127508906777 1996.3884284154203 1838.2876920418148 1932.9988830885152 1384.7725137458758 1517.6594705433222 1.1146131041318623 0.982923721245897 1.3098718186092928 0.8752104504031727 0.9938080956634043 0.8335946076478983 1.315438981645015 1.2112649297959492 1.273671018174124 0.9124395430090303 1.0 10.567632402641722 -7.768463771007994 24.99997430242641 1.1526694131208644 1.0223581568974678 0.13048175739741885 0.15852060006127255 257.60166978137 916810.31485348 0.02474548164224342 0.034580789522576955 1.7042614834529264e-08 7.768463771007994 -0.13031125622339657 LQPLS(ph)PVPSDIEISR ddPTM_A549_MK2206_60min_R1 1 LQPLSPVPSDIEISR 15 0 H0Y327;A0A087WVM4;B7ZM99;Q6UB35 H0Y327 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial 1 LQPLS(1)PVPSDIEISR 63.128 0.0045942 1347000.0 1147.1 1417.1 1334.7 921.11 1645.4 1155.0 979.37 1408.8 1852.9 1843.0 2163.4 True False 1340.702436097606 1489.2243370765132 1523.9805297334879 1146.7819913501994 1403.3638396482 1277.2213333730501 1157.3088518293835 1608.5017142690544 1433.2211084732876 1426.665019980911 1626.1680731974916 0.8244550229432424 0.915787464790334 0.9371605277779959 0.7052050831961743 0.8629881884772233 0.7854177894795852 0.7116784980003927 0.9891362035575448 0.8813486945756982 0.8773170765649685 1.0 10.667260660056193 -9.783108154993025 0.5744462040794 0.9957640838688614 0.833938496488433 0.13242251640778402 0.088278666615752 0.6743964073571506 0.46646883378796905 0.04823619664247813 0.020920435881394896 1.647751990737522e-10 9.783108154993025 -0.1618255873804284 LQPLS(ph)PVPSDIEISR ddPTM_A549_PD325901_60min_R1 2 LQPLSPVPSDIEISR 15 0 H0Y327;A0A087WVM4;B7ZM99;Q6UB35 H0Y327 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial 1 LQPLS(0.999)PVPS(0.001)DIEIS(0.001)R;LQPLS(1)PVPSDIEISR 79.02199999999999 0.00047294 2897800.0 2658.6 2604.8 2559.7 2742.2 3404.3999999999996 2798.4 2830.6 3146.3 3149.0 3144.7 3249.6 True False 2928.4991148421236 2824.3156375463936 2733.4166347265236 2911.5794660119427 3165.2866885424155 2775.6107582065615 2938.320031963753 3083.5445782753986 3016.65848094248 2946.1431053221418 2849.919800911633 1.0275724649884375 0.9910158302149242 0.9591205457262895 1.0216355790365 1.1106581622156184 0.9739259179569539 1.031018497792058 1.08197591289728 1.0585064463840388 1.03376351305736 1.0 11.476705605885066 -6.508398844950081 24.86422374283888 1.0345382496066773 0.9920748672717984 0.22881242298538151 0.037954482387059764 810.548382448182 1391836.1877243512 0.005662132049104702 0.012697920486544148 3.1017097487762155e-07 6.508398844950081 -0.042463382334878896 LQPLSQSSSS(ph)LLGEGR ddPTM_A549_MK2206_60min_R1 2 LQPLSQSSSSLLGEGR 16 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 LQPLSQSSS(0.097)S(0.902)LLGEGR;LQPLSQSS(0.001)S(0.173)S(0.825)LLGEGR 201.04 2.0508e-39 8729900.0 4338.4 4746.1 4852.6 4309.9 6258.6 4594.0 3865.2 4824.0 7193.4 7177.200000000001 6659.8 True False 5070.615856303595 4987.656217767865 5540.771647999341 5365.825693478764 5337.968230717289 5080.134030749607 4567.456808040812 5507.816772880405 5564.106385499356 5555.865535218118 5005.987858870594 1.0129101386689303 0.9963380572187674 1.1068288226430898 1.0718814836856903 1.0663166554146604 1.014811496545607 0.9123986986798805 1.1002457313436291 1.1114901878237236 1.109843989208472 1.0 12.28943907669344 LQPLSQSSSS(ph)LLGEGR ddPTM_A549_PD325901_60min_R1 2 LQPLSQSSSSLLGEGR 16 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 LQPLSQSS(0.001)S(0.206)S(0.793)LLGEGR;LQPLSQSSS(0.064)S(0.936)LLGEGR 242.9 1.6233999999999997e-65 25565000.0 9233.5 8294.3 8103.200000000001 7891.900000000001 9880.3 9460.4 8204.0 10104.3 8792.599999999999 9080.900000000001 8901.5 True False 10170.878122656559 8993.28976984838 8653.131880500048 8379.364739194678 9186.341813184586 9383.357638985628 8516.207709401058 9902.76180982999 8423.077599090137 8507.53042424391 7806.671931257658 1.302844312175166 1.1520004745991108 1.1084277598310739 1.0733594050038118 1.1767295838835978 1.2019664360961515 1.0908883816806036 1.268499803377116 1.0789588281998135 1.089776859993314 1.0 12.930491927579046 -9.127016028740972 2.37873799089043 1.028327633475715 1.1642323584834227 0.32085470350886747 0.07117899596340196 0.18132231492587192 2.1236668210917675 0.013385920173197731 0.012850574521155397 7.464212093310296e-10 9.127016028740972 0.13590472500770767 LQPQEIS(ph)PPPTANLDR ddPTM_A549_MK2206_60min_R1 2 LQPQEISPPPTANLDR 16 0 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-6;B4DWJ1;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 LQPQEIS(1)PPPTANLDR;LQPQEIS(1)PPPTANLDR 208.85 4.3501999999999995e-46 54228000.0 8698.5 10335.0 8417.1 6843.0 11936.0 8294.3 7287.4 8863.599999999999 11103.9 11110.0 13035.0 True False 10166.594142093121 10861.007355645865 9610.771346984147 8519.535307193946 10180.230211523585 9171.997320689254 8611.426250366501 10120.042443636556 8588.884379284664 8600.243283769889 9798.049752301602 1.037614055767062 1.1084866509373021 0.9808861548928691 0.8695133748624487 1.0390057683808156 0.9361043832763468 0.8788918680825888 1.0328629369594002 0.8765912193155684 0.8777505219086744 1.0 13.258278901983664 -5.907543201702577 5.339407395693824 0.944635562998199 1.0712285136223485 0.4080234170869036 0.061451293086629145 0.15013886178309624 6.824838850241731 0.008440168936073637 0.027294662048788863 1.2372481078202679e-06 5.907543201702577 0.12659295062414955 LQPQITMIPPS(ph)AQPPRTQTPPLGQTPQLGLK ddPTM_A549_PD325901_60min_R1 3 LQPQITMIPPSAQPPRTQTPPLGQTPQLGLK 31 1 H0Y3P2;D3DQV9;P78344-2;P78344 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 LQPQIT(0.003)MIPPS(0.437)AQPPRT(0.437)QT(0.12)PPLGQT(0.003)PQLGLK;LQPQIT(0.065)MIPPS(0.423)AQPPRT(0.423)QT(0.088)PPLGQT(0.001)PQLGLK;LQPQIT(0.074)MIPPS(0.308)AQPPRT(0.308)QT(0.308)PPLGQT(0.003)PQLGLK 73.266 7.3326e-06 12043200.0 2553.49 2927.16 3176.9300000000003 3106.29 3485.4900000000002 4105.75 3391.08 4198.9 3570.4500000000003 2988.9399999999996 3770.39 True False 2812.718425020013 3173.842046068914 3392.5355742320335 3298.158478403556 3240.6812066877283 4072.314133257072 3520.1294050701786 4115.149645526673 3420.396403074336 2800.2178183043065 3306.655932471447 0.8506232527548587 0.9598343797737474 1.0259717501652488 0.9974301970808496 0.9800479012237574 1.2315506107747232 1.0645587194308352 1.2445049408121955 1.0343974314006954 0.8468428150646382 1.0 11.691157221227876 -4.972598207522353 0.9465514480268318 1.0495964276065906 0.640729392537749 0.2493085085887503 0.10519749006742286 3.0791435411728107 1.450203493038413 0.01377757356070047 1.4638351961403995 1.0651279777894246e-05 4.972598207522353 -0.4088670350688416 LQPSSS(ph)PENSLDPFPPR ddPTM_A549_MK2206_60min_R1 2 LQPSSSPENSLDPFPPR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.056)S(0.173)S(0.77)PENS(0.001)LDPFPPR;LQPS(0.001)S(0.008)S(0.991)PENSLDPFPPR 311.9 4.1504999999999985e-152 62741000.0 18526.699999999997 21790.0 18124.0 19378.8 29378.0 20435.4 21154.0 20126.8 33299.0 31492.0 32262.0 True False 21653.554025673006 22899.017927384954 20694.25572854554 24126.606869947394 25056.53511680129 22597.86046407933 24997.407978188807 22979.835535739927 25756.829667576254 24377.93532785612 24250.455014096995 0.8929133087641288 0.9442716812560242 0.8533553583434123 0.9948929558609269 1.0332397929125747 0.9318530498064058 1.0308016061413117 0.9476043036050892 1.0621173768741077 1.0052568215188136 1.0 14.565724196557369 -6.440151453539424 0.6191332730523269 1.0240029366014765 0.8791651808131213 0.4199353085128157 0.04652546780558409 0.7854611680056436 0.4286396137949863 0.00882597688313622 0.06178307628024379 3.6295145894279336e-07 6.440151453539424 -0.14483775578835512 LQPSSS(ph)PENSLDPFPPR ddPTM_A549_PD325901_60min_R1 4 LQPSSSPENSLDPFPPR 17 0 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.031)S(0.251)S(0.715)PENS(0.003)LDPFPPR;LQPS(0.012)S(0.102)S(0.885)PENSLDPFPPR;LQPS(0.021)S(0.076)S(0.903)PENSLDPFPPR;LQPSS(0.005)S(0.995)PENSLDPFPPR 352.06 1.0521999999999997e-219 138242500.0 33297.0 34107.8 34008.8 34110.1 39422.0 37559.2 35877.0 39190.7 38793.6 38482.7 40749.0 True False 36677.28692804413 36982.18400733452 36316.84167952785 36217.00340734226 36653.13471851692 37253.33032791308 37242.3188676477 38409.01074399061 37163.23990037795 36052.89575450133 35737.13132919377 1.0263075284412195 1.0348391891523667 1.016221513276879 1.013427828712051 1.0256316988872263 1.0424264327416992 1.0421183089540356 1.074764798276189 1.0399055133454203 1.0088357518794357 1.0 15.125136211375747 -5.6686946564848775 16.544670245727655 1.0259888282135257 1.030568150779262 0.0 0.019914874055495337 12.913686135566131 2274.047110505168 0.003259941254292552 0.012626298092927458 2.144397753175942e-06 5.6686946564848775 0.004579322565736232 LQPST(ph)PEKK ddPTM_A549_MK2206_60min_R1 2 LQPSTPEKK 9 1 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 LQPS(0.021)T(0.979)PEKK;LQPS(0.222)T(0.778)PEKK 82.171 0.00094753 35386000.0 4649.2 5129.200000000001 4915.3 4375.5 7415.3 5588.299999999999 5415.5 4939.9 6510.0 6941.5 8091.5 True False 5433.871297973138 5390.254371415463 5612.363450812175 5447.497696423657 6324.519192988511 6179.65019678668 6399.426250632571 5640.145952809273 5035.495394333807 5373.410328918875 6082.157235960758 0.8934118417467689 0.8862405495776368 0.9227586912138793 0.8956522307932658 1.0398480255648093 1.0160293391051278 1.0521638955329797 0.9273265609547064 0.827912728819544 0.8834711304647935 1.0 12.570367398072664 LQPST(ph)PEKK ddPTM_A549_PD325901_60min_R1 2 LQPSTPEKK 9 1 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 LQPS(0.201)T(0.799)PEKK;LQPS(0.019)T(0.981)PEKK 100.55 0.00047559 57846000.0 6228.4 6075.4 6817.6 6491.0 7083.3 6675.4 6219.1 6996.0 6793.8 6498.9 6818.5 True False 6860.702582894258 6587.395279618157 7280.283333559222 6891.934327869415 6585.793444058417 6621.037755621817 6455.771253722105 6856.459291744174 6508.280212075901 6088.558344890786 5979.867726032735 1.1473000569940535 1.1015954836159023 1.217465614141474 1.152522872348178 1.1013276122125322 1.107221440166279 1.0795842900700918 1.1465904608383373 1.0883652465660363 1.0181760908163366 1.0 12.545897857194635 -10.685879242229516 0.21403010029677752 0.9128133579836584 1.1661572074839055 0.671285414743538 0.033671300471311116 2.7995844305484843 0.1861842676855462 0.19631591215580343 0.0393014679495153 2.0612029614732286e-11 10.685879242229516 0.25334384950024713 LQPTPPIPAPAPKPAAPPRPLDRES(ph)PGVENK ddPTM_A549_PD325901_60min_R1 1 LQPTPPIPAPAPKPAAPPRPLDRESPGVENK 31 3 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 LQPTPPIPAPAPKPAAPPRPLDRES(1)PGVENK 50.253 0.0014841 3758300.0 1549.0 1766.7 1743.0 1081.8 1667.5 1932.1 1837.3 1906.5 2037.7 1579.9 1686.1 True False 1706.2533396864699 1915.58600923419 1861.2904615104624 1148.6203290539408 1550.380552562705 1916.3656181857123 1907.219456909138 1868.473361879683 1952.0625552926292 1480.1448443725792 1478.7203890685319 1.1538715177662928 1.295434906690403 1.258716979403332 0.7767664107055926 1.0484609288029854 1.2959621253297655 1.2897769389049434 1.263574490277139 1.320102549287403 1.0009633026734315 1.0 10.530133563981703 -7.232297904130431 24.62942600782685 1.1846487341487955 1.1072594897617138 0.06672376884087261 0.16210549838924115 1884.4363941401152 1592664.7179581164 0.027151474180571077 0.047022400815341744 5.857362411341019e-08 7.232297904130431 -0.07738924438708161 LQQELDDLTVDLDHQR ddPTM_A549_PD325901_60min_R1 1 LQQELDDLTVDLDHQR 16 0 P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35580-2;P35580-5 MYH10 Myosin-10 0 134.44 2.9883999999999997e-10 1886500.0 193.64 137.32 147.24 188.46 259.96 159.06 228.11 221.43 204.56 207.16 312.31 False True 213.29819024976626 148.89243832458186 157.23259182604727 200.1007461762856 241.70130641331394 157.7646680961749 236.79085087658157 217.01340494152544 195.96305457656197 194.0798822458532 273.8978498962062 0.7787508749360237 0.5436057215527788 0.5740555900151486 0.7305670572153594 0.8824505431674868 0.575998198437702 0.864522488826815 0.7923151095335829 0.7154603610463621 0.708584906085973 1.0 8.09749413067652 -14.99999999999998 0.1681188278114896 2.148473328187008 0.6353848699010434 0.009632221715842437 0.1349438702388338 31.305717664349135 0.33355767472402353 11.862303749368976 0.14197810445193906 1.000000000000045e-15 14.99999999999998 -1.5130884582859645 LQQGAGLES(ph)PQGQPEPGAAS(ph)PQR ddPTM_A549_MK2206_60min_R1 1 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LQQGAGLES(1)PQGQPEPGAAS(1)PQR 146.15 1.1912999999999998e-27 7362200.0 844.16 1191.4 1085.3 865.88 1194.5 1368.1 1133.2 1189.6 1853.9 1826.1 2255.3 True False 986.6335702695103 1252.0371711191578 1239.2118595337936 1078.0206388708302 1018.7906323445824 1512.871433928718 1339.0877716216103 1358.2294429972073 1433.99461006996 1413.5827417184707 1695.2467668865213 0.5819999716510622 0.7385574746847273 0.7309920205951619 0.6359077981612763 0.6009689280904433 0.8924195954711935 0.7899072853452301 0.8011986629484759 0.8458913699647542 0.8338507226972314 1.0 10.727279577758875 -8.755685264579768 0.18531563581640342 1.1057217850460335 0.5516445916187132 0.5243787242123149 0.0840720298940385 1.0735381919733549 0.17087487746698327 0.22280806171088263 0.20371380009809534 1.7551520086412716e-09 8.755685264579768 -0.5540771934273203 LQQGAGLES(ph)PQGQPEPGAAS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LQQGAGLES(1)PQGQPEPGAAS(1)PQR;LQQGAGLES(1)PQGQPEPGAAS(1)PQR 134.46 1.1717e-22 40712000.0 6591.1 5708.6 6445.1 6909.6 6699.4 5810.4 5564.4 5502.2 6840.0 6175.0 6655.4 True False 7260.22361988863 6189.683756333442 6882.503243534757 7336.390299159837 6228.857255675319 5763.082028831978 5776.156286956513 5392.454304607603 6552.538586740734 5785.10944616791 5836.827992056643 1.2438645836007316 1.0604533429384937 1.1791512878058386 1.2569139109708138 1.0671647792520509 0.9873654040644978 0.9896053635326074 0.9238672635113131 1.1226197852083535 0.9911392718854973 1.0 12.510968838120661 -6.919745135308282 7.276165525111744 1.0375660213900588 1.1752533416149158 0.576382187450089 0.06951106838129632 0.17330945297628067 13.327723398378586 0.011092621105101622 0.021049816370778126 1.2029701877279e-07 6.919745135308282 0.13768732022485697 LQQGAGLES(ph)PQGQPEPGAAS(ph)PQRQQDLHLES(ph)PQRQPEYSPESPR ddPTM_A549_MK2206_60min_R1 2 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 44 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 LQQGAGLES(0.993)PQGQPEPGAAS(0.81)PQRQQDLHLES(0.774)PQRQPEY(0.163)S(0.21)PES(0.05)PR;LQQGAGLES(0.843)PQGQPEPGAAS(0.814)PQRQQDLHLES(0.717)PQRQPEY(0.287)S(0.294)PES(0.045)PR 66.442 3.4341e-05 67178000.0 795.9200000000001 1387.62 986.86 1213.3000000000002 1909.8999999999999 1140.88 991.1800000000001 1181.23 1723.78 1622.8899999999999 1771.71 True False 930.251837624275 1458.2439309957736 1126.8115873026068 1510.5585544671062 1628.9562400292302 1261.6071643451478 1171.2645759582667 1348.6729698651584 1333.3465823110178 1256.2780218539442 1331.7455102915437 0.6985207236933922 1.0949869323580728 0.8461163026980484 1.1342696805010568 1.2231738177008171 0.9473335217544369 0.8794957947347277 1.012710731474446 1.0012022357177863 0.9433318994850013 1.0 10.379102701817171 -5.251179527250048 24.650394491668113 1.0074843816472818 0.6985205152512587 0.41980809722313717 0.10467714446987117 847.2270954437939 2035505.8532259052 0.013393685278493902 0.25451477141949685 5.6081609976189945e-06 5.251179527250048 -0.30896386639602313 LQQGAGLES(ph)PQGQPEPGAAS(ph)PQRQQDLHLES(ph)PQRQPEYSPESPR ddPTM_A549_PD325901_60min_R1 1 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 44 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 LQQGAGLES(0.979)PQGQPEPGAAS(0.901)PQRQQDLHLES(0.793)PQRQPEY(0.11)S(0.19)PES(0.027)PR 56.46 0.0006603 68144000.0 857.05 898.78 743.8 867.13 889.22 961.82 983.67 880.72 655.91 885.19 1270.1 True False 944.0570850731366 974.5233448686845 794.2787408327488 920.6906507048852 826.7642548424639 953.9872568104047 1021.1041001348781 863.1533486885264 628.3443836884671 829.2989523325299 1113.8857518272603 0.8475349321278862 0.8748862648346472 0.7130702044889109 0.8265575254863881 0.742234339101841 0.8564498246300826 0.91670451701157 0.7749029442854234 0.5641012847661506 0.7445098844043175 1.0 10.12138555169839 LQQGAGLES(ph)PQGQPEPGAAS(ph)PQRQQDLHLESPQR ddPTM_A549_MK2206_60min_R1 2 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQR 34 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LQQGAGLES(1)PQGQPEPGAAS(0.85)PQRQQDLHLES(0.15)PQR;LQQGAGLES(1)PQGQPEPGAAS(0.791)PQRQQDLHLES(0.209)PQR 105.6 1.2451e-13 9364700.0 1123.73 1399.68 973.68 853.67 1698.9099999999999 1376.1 1149.94 899.22 1637.5 1364.16 1750.49 True False 1313.38815143925 1470.9177334833494 1111.7624651164322 1062.8191883227018 1449.0025895324677 1521.7179886187491 1358.8692129355402 1026.6871887457537 1266.6088645501702 1055.9953085497327 1315.7950219337501 0.9981707861373704 1.1178927636628568 0.8449359106728777 0.8077391771559799 1.1012373244906717 1.1565007947684478 1.0327362471234207 0.7802789732681076 0.9626186780131651 0.8025530503967067 1.0 10.361719044348794 -5.7232219361239345 24.999976517188184 0.9729317285214385 1.0580316397723175 0.07354199718973453 0.12488460992646896 350.87326764913195 229519.3223936817 0.015688267359675444 0.060757928753894165 1.8913768273702103e-06 5.7232219361239345 0.08509991125087901 LQQGAGLES(ph)PQGQPEPGAASPQRQQDLHLES(ph)PQRQPEY(ph)S(ph)PESPR ddPTM_A549_MK2206_60min_R1 1 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 44 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 4 LQQGAGLES(0.997)PQGQPEPGAAS(0.223)PQRQQDLHLES(0.755)PQRQPEY(0.665)S(0.713)PES(0.647)PR 45.227 0.0057113 5164900.0 511.5 721.96 559.13 413.27 503.24 574.66 432.76 465.44 1140.6 820.71 775.96 True False 597.8286950256522 758.7046802595155 638.4230415747994 514.5211685523954 429.2140626379968 635.4701397715646 511.38689026382633 531.417545350219 882.2559211639232 635.3110409921503 583.2677165934754 1.0249644854634146 1.300782914389064 1.0945626226382867 0.8821355167013386 0.7358783118407176 1.0894999357807302 0.8767618637467838 0.9111039926123757 1.512608869074158 1.0892271643330946 1.0 9.188014414107407 -8.726873695302903 24.998630254192037 1.242065542153342 0.9908896281695578 0.19971795329368403 0.18317043151909837 215.06939537342188 155542.6222027506 0.03886738238821512 0.04407050762425413 1.8755398869832467e-09 8.726873695302903 -0.25117591398378414 LQQGAGLES(ph)PQGQPEPGAASPQRQQDLHLES(ph)PQRQPEY(ph)S(ph)PESPR ddPTM_A549_PD325901_60min_R1 1 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 44 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 4 LQQGAGLES(0.999)PQGQPEPGAAS(0.225)PQRQQDLHLES(0.714)PQRQPEY(0.706)S(0.711)PES(0.645)PR 61.262 6.9454e-05 16855000.0 466.95 489.83 686.28 392.95 804.37 625.98 773.85 890.75 647.9 690.29 944.2 True False 514.3544202495783 531.1096931585342 732.8550877368906 417.2216290458 747.873826125855 620.8822264230074 803.2992852169688 872.9832924701429 620.6710161329412 646.7049715943713 828.0693857769462 0.6211489388259162 0.6413830800666711 0.885016521953991 0.5038486341990976 0.903153575016124 0.7497949291295887 0.9700869263066203 1.054239303450466 0.7495398656123352 0.7809792062142141 1.0 9.693607849192906 -6.7955267287309775 24.97208081804823 0.8903397280209491 0.6771850090097667 0.4206646516956051 0.12599088423621627 145.782253446494 106798.3609399725 0.0192077044584441 0.03630048195281502 1.601302092890035e-07 6.7955267287309775 -0.21315471901118233 LQQGAGLES(ph)PQGQPEPGAASPQRQQDLHLES(ph)PQRQPEYS(ph)PESPR ddPTM_A549_PD325901_60min_R1 1 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 44 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 LQQGAGLES(0.652)PQGQPEPGAAS(0.436)PQRQQDLHLES(0.816)PQRQPEY(0.311)S(0.641)PES(0.143)PR 65.55 3.874e-05 80326000.0 752.93 870.17 888.15 1143.4 1102.8 1481.6 722.06 970.69 847.11 1302.0 1136.4 True False 829.3668993222291 943.5022797618806 948.4251998798143 1214.0252211501906 1025.343132453464 1469.5343408229144 749.5383884263925 951.3288264584264 811.5089126043771 1219.7914977992893 996.6300042331301 0.8321713131247701 0.9466926299172286 0.9516321963531414 1.2181303151557614 1.028810218534839 1.4745034110764774 0.752072870817425 0.9545456412286512 0.8142529415706315 1.2239160898410577 1.0 9.960914197778454 LQQGAGLESPQGQPEPGAAS(ph)PQR ddPTM_A549_MK2206_60min_R1 4 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LQQGAGLESPQGQPEPGAAS(1)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR 153.76 3.2554e-29 124634000.0 20531.7 23053.4 20096.4 18151.4 28098.0 22521.8 21256.199999999997 20657.9 32701.9 31688.4 31880.1 True False 23996.949008129388 24226.71959096724 22946.371707302063 22598.4938148473 23964.82142119552 24905.041927239097 25118.176395290553 23586.22058716547 25294.971864203475 24529.968431450397 23963.391324000797 1.0014003729136194 1.0109887729748295 0.9575594454496044 0.9430423895057597 1.000059678414269 1.039295381463607 1.048189551123057 0.9842605442720636 1.0555672827021365 1.023643444276693 1.0 14.548544473823705 -7.002796904045655 24.782513609977922 1.025745054824932 0.978163949475102 0.42337366282186184 0.025655747619785927 85.51000677034457 757694.11681803 0.004251838891157027 0.00792566883920939 9.935805834978376e-08 7.002796904045655 -0.047581105349830066 LQQGAGLESPQGQPEPGAAS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LQQGAGLESPQGQPEPGAAS(1)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR 172.2 6.0636e-41 189932000.0 14468.0 15498.8 14514.0 14356.3 17208.1 14028.599999999999 14715.5 14426.599999999999 14474.2 15280.8 15929.8 True False 15936.780709221333 16804.938269043327 15499.00731977214 15243.056045477077 15999.462420722206 13914.355732767504 15275.506405130578 14138.850145551236 13865.899709386355 14315.96768016235 13970.535587322165 1.1407422864792296 1.2028843249426526 1.1094068099892331 1.0910860181559314 1.1452289943158107 0.9959786899934142 1.0934087894949878 1.01204782430688 0.9925102457753471 1.024725758771457 1.0 13.770099709843153 -7.058823057189794 0.5424717447402161 0.9936492318115854 1.1784209713742058 0.6935387620881222 0.03825496324040036 0.35837593410281743 0.18351974730113324 0.0076934413379277766 0.029878896345884826 8.733271119782059e-08 7.058823057189794 0.18477173956262039 LQQGAGLESPQGQPEPGAAS(ph)PQRQQDLHLES(ph)PQRQPEYSPESPR ddPTM_A549_MK2206_60min_R1 2 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 44 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LQQGAGLES(0.063)PQGQPEPGAAS(0.886)PQRQQDLHLES(0.895)PQRQPEY(0.097)S(0.043)PES(0.016)PR;LQQGAGLESPQGQPEPGAAS(1)PQRQQDLHLES(0.963)PQRQPEY(0.002)S(0.034)PES(0.002)PR 108.95 6.6258e-16 30056000.0 1089.76 1306.42 877.01 1277.95 1436.6599999999999 1265.26 870.55 1362.99 1976.14 1903.78 2271.73 True False 1273.6848459260107 1372.9111978290164 1001.3832055005367 1591.0478073693548 1225.3292171319945 1399.1489733883864 1028.7176664182787 1556.1980064818126 1528.547445247129 1473.7147757673672 1707.5967444415912 0.7458932268827463 0.8040020000611902 0.5864283875921792 0.9317468029547283 0.7175752829938165 0.8193673230771638 0.6024359496859337 0.9113381198151158 0.8951454435730879 0.8630344257591643 1.0 10.737751601843499 -8.441220332709397 7.607397673174774 0.9481102716516238 0.7492563361631835 0.41771906585819807 0.09679519240543621 0.17318328045266174 14.423760804498299 0.014763381345105686 0.017835459550654093 3.6205926654387006e-09 8.441220332709397 -0.19885393548844021 LQQGAGLESPQGQPEPGAAS(ph)PQRQQDLHLES(ph)PQRQPEYSPESPR ddPTM_A549_PD325901_60min_R1 1 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR 44 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LQQGAGLES(0.001)PQGQPEPGAAS(0.999)PQRQQDLHLES(0.974)PQRQPEY(0.003)S(0.022)PES(0.002)PR 92.637 9.004e-11 29833000.0 1042.1 1074.0 628.57 1286.0 1061.4 1370.8 972.66 1093.7 1345.9 1036.4 1646.9 True False 1147.893224846527 1164.5097492033276 671.228540098469 1365.4332992820935 986.8509256312177 1359.6366592872919 1009.675108559975 1071.885295508948 1289.3365034933265 970.9615271268694 1444.3417405592593 0.794751818501108 0.8062563841383005 0.46472972514009364 0.9453671945763944 0.6832530681063763 0.9413538507589145 0.6990555491174975 0.7421272025925849 0.8926810513653689 0.6722519330853834 1.0 10.496196418215968 -9.222509944211302 0.522784748016572 1.000197768375144 0.7411990020596806 0.0 0.1583898533578345 0.5847224989590193 0.3725388365430575 0.05589891983071123 0.037480768379890866 5.99087220918943e-10 9.222509944211302 -0.25899876631546337 LQQGAGLESPQGQPEPGAAS(ph)PQRQQDLHLESPQR ddPTM_A549_MK2206_60min_R1 2 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQR 34 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LQQGAGLESPQGQPEPGAAS(1)PQRQQDLHLESPQR;LQQGAGLESPQGQPEPGAAS(0.993)PQRQQDLHLES(0.007)PQR 159.09 3.0933e-51 124786000.0 4777.9 5596.3 5154.1 5072.9 6485.2 5672.3 5045.8 4803.2 7109.2 6259.700000000001 7586.9 True False 5584.2927115602415 5881.127766270053 5885.028881620867 6315.7607277311345 5531.235670892489 6272.539021031994 5962.556546106885 5484.068309183077 5498.977551059585 4845.629422449543 5702.8633422122775 0.9792085793509406 1.031258757813513 1.0319428203829135 1.1074718696101702 0.9699050001690537 1.0998929212634307 1.045537335950587 0.9616341792008776 0.9642485223793561 0.8496835943064712 1.0 12.477470746464071 -8.25288650639025 24.121841187769107 0.9810343983894895 1.039850896084537 0.3250355052236401 0.056558192903717656 341.1541091405221 962163.3917861781 0.006253212216107342 0.008004437574478718 5.586161580948124e-09 8.25288650639025 0.05881649769504749 LQQGAGLESPQGQPEPGAAS(ph)PQRQQDLHLESPQR ddPTM_A549_PD325901_60min_R1 2 LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQR 34 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LQQGAGLESPQGQPEPGAAS(0.982)PQRQQDLHLES(0.018)PQR;LQQGAGLESPQGQPEPGAAS(0.999)PQRQQDLHLES(0.001)PQR 119.12 2.7585e-21 219590000.0 7154.6 7301.9 6732.1 8322.7 7615.1 7520.3 5954.5 7284.299999999999 7349.299999999999 9050.7 7660.9 True False 7880.929725061858 7917.256739020279 7188.9807894059595 8836.774276776892 7080.241646668824 7459.0571701475155 6181.101755927423 7139.008922077198 7040.4344788791905 8479.237257397877 6718.657866446305 1.172991672104642 1.178398557628586 1.0700025112617353 1.3152588586045864 1.0538178587762754 1.1102004773005103 0.9199905515053096 1.0625647359914203 1.0478929897650946 1.2620433166784832 1.0 12.71395735058161 -7.134067778700346 2.3560862924227726 1.0218100477863774 1.1740258966812696 0.14555553432551005 0.1016171789194113 0.179451300524113 1.9469943072863949 0.009855407588492484 0.018587773852838323 7.343992442951622e-08 7.134067778700346 0.15221584889489215 LQQLFK ddPTM_A549_PD325901_60min_R1 1 LQQLFK 6 0 A6NIV2;A0A087WZY2;Q9P0U1 A6NIV2 TOMM7 Mitochondrial import receptor subunit TOM7 homolog 0 104.04 0.022583000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LQQQAALS(ph)PTTAPAVSSVSK ddPTM_A549_MK2206_60min_R1 2 LQQQAALSPTTAPAVSSVSK 20 0 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LQQQAALS(0.924)PT(0.075)T(0.001)APAVSSVSK;LQQQAALS(0.758)PT(0.193)T(0.049)APAVSSVSK 154.19 1.2158999999999999e-26 17168500.0 1710.1999999999998 2080.75 1815.42 1773.45 2527.0 2594.6000000000004 2257.5 1775.45 3264.3 2965.5 3564.1 True False 1998.839949624379 2186.651287398176 2072.873854265954 2207.945329613196 2155.2816474966594 2869.15884984391 2667.658528446688 2027.1254745875876 2524.9412620159515 2295.5914903708017 2679.035605844123 0.7461042866560093 0.8162083708884473 0.773738822188152 0.8241567692481289 0.8044990677970341 1.0709670463449783 0.9957532936954563 0.7566623863324398 0.9424814125306786 0.8568723332243642 1.0 11.387498040173616 -7.159919698405186 8.050633203270941 0.9621628006573606 0.7939411512443441 0.4230883775744658 0.0810479903018852 0.18611532559360933 13.325428526263257 0.01138606995667824 0.01976595818285026 6.919589031608718e-08 7.159919698405186 -0.16822164941301654 LQQQAALS(ph)PTTAPAVSSVSK ddPTM_A549_PD325901_60min_R1 3 LQQQAALSPTTAPAVSSVSK 20 0 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LQQQAALS(0.796)PT(0.203)T(0.001)APAVSSVSK;LQQQAALS(0.804)PT(0.175)T(0.021)APAVSSVSK;LQQQAALS(0.897)PT(0.051)T(0.051)APAVSSVSK 181.14 1.4675999999999998e-43 24667300.0 5369.4 4800.2 6314.9 5260.6 5665.2 5453.5 5748.6 6235.1 6062.200000000001 6028.7 6322.9 True False 5914.4975352566335 5204.729700303366 6743.467088578548 5585.5353143105585 5267.295895879007 5409.08850410216 5967.366118754621 6110.736039158678 5807.42681586837 5648.04685313562 5545.223384165484 1.0665931966141562 0.9385969400557594 1.2160857410784707 1.0072696674871902 0.9498798390917658 0.9754500638419616 1.076127273031881 1.101981942983222 1.0472845570931577 1.0185427099769777 1.0 12.43702986384734 -10.670261673430874 1.1026063204166048 1.0015319033961705 1.0410769648950402 0.026361306224472636 0.07435041306478918 1.467320665477026 3.3451469385674715 0.04065097433068845 0.012590726646042693 2.136674301166375e-11 10.670261673430874 0.039545061498869716 LQQQHSEQPPLQPS(ph)PVMTR ddPTM_A549_MK2206_60min_R1 7 LQQQHSEQPPLQPSPVMTR 19 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 LQQQHSEQPPLQPS(0.962)PVMT(0.038)R;LQQQHSEQPPLQPS(0.933)PVMT(0.067)R;LQQQHSEQPPLQPS(0.988)PVMT(0.012)R;LQQQHSEQPPLQPS(0.956)PVMT(0.044)R;LQQQHSEQPPLQPS(0.749)PVMT(0.251)R;LQQQHSEQPPLQPS(0.999)PVMT(0.001)R;LQQQHSEQPPLQPS(0.937)PVMT(0.063)R 169.68 1.4962e-34 364281000.0 31443.079999999998 34438.8 27650.5 28546.14 37640.2 29791.199999999997 25985.65 26100.300000000003 48253.9 44809.9 44839.8 True False 36749.90319450082 36191.58781999199 31571.756677452446 35539.94558148493 32103.376441671437 32943.68501020191 30706.906241298177 29800.09745381642 37324.46869564424 34687.312468172866 33704.84014447669 1.0903449782574663 1.0737801355786227 0.9367128442716023 1.0544463474427415 0.9524856460988825 0.977417037701052 0.9110533119181757 0.8841489034238854 1.1073919512939956 1.0291492948634315 1.0 15.040668162381731 -8.78958560425535 24.999394928695473 1.0507128477539314 0.98490200115234 0.13843793124660975 0.06683572795432145 308.300485991448 273830.1781973971 0.012831541506584093 0.013661515699200542 1.6233583370256596e-09 8.78958560425535 -0.06581084660159142 LQQQHSEQPPLQPS(ph)PVMTR ddPTM_A549_PD325901_60min_R1 3 LQQQHSEQPPLQPSPVMTR 19 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 LQQQHSEQPPLQPS(0.96)PVMT(0.04)R;LQQQHSEQPPLQPS(0.983)PVMT(0.017)R;LQQQHS(0.001)EQPPLQPS(0.758)PVMT(0.241)R 125.18 2.6709e-15 407881500.0 6710.49 7993.959999999999 6623.59 8145.469999999999 7153.23 7276.0199999999995 7256.110000000001 6750.8099999999995 7688.69 7488.759999999999 7958.4 True False 7391.734004798358 8667.63906400506 7073.106648282317 8648.597182195424 6650.81180210382 7216.766505476746 7532.245236745743 6616.159798642009 7365.56109743971 7015.918415560222 6979.567252454192 1.0590533391879329 1.2418590939083363 1.0134018904675264 1.2391308614662835 0.9528974450049502 1.0339848080035547 1.0791851363130307 0.9479326667875576 1.0553034065041484 1.0052082259245008 1.0 12.76892187380582 -6.771983185267528 24.99998867836577 1.0211262358457696 1.1368283364705025 0.41178918078451865 0.07273662015033694 152.49951849963188 361585.8327682262 0.009311897891190815 0.01772979361440223 1.690506382307442e-07 6.771983185267528 0.11570210062473296 LQQS(ph)PKPGEK ddPTM_A549_MK2206_60min_R1 1 LQQSPKPGEK 10 1 Q8TDR0-2;Q8TDR0 Q8TDR0-2 TRAF3IP1 TRAF3-interacting protein 1 1 LQQS(1)PKPGEK 46.481 0.009780200000000001 7415600.0 2697.6 2825.3 2929.2 2262.0 3091.9 2849.5 2438.0 2742.8 3877.6 3670.4 4271.6 True False 3152.8889300121173 2969.0957021680015 3344.6046060502968 2816.190101545037 2637.0856058151635 3151.0321986549825 2880.953042016844 3131.6002994727173 2999.329791254802 2841.2540907964903 3210.84382983748 0.981950258904901 0.924708848987615 1.0416590725994876 0.8770872240421551 0.8213060944632247 0.9813719899340215 0.8972572926920168 0.9753200296979958 0.9341250930309544 0.8848932683656257 1.0 11.64873678111843 -10.67247362564615 0.6224389596953434 1.007623826755127 0.934457903526975 0.0 0.06601477389637268 1.6278109694311502 0.9381568324200621 0.06573261122031346 0.011791833466475669 2.125819440598381e-11 10.67247362564615 -0.07316592322815196 LQQTVPADAS(ph)PDSK ddPTM_A549_MK2206_60min_R1 2 LQQTVPADASPDSK 14 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 LQQTVPADAS(0.849)PDS(0.151)K;LQQTVPADAS(0.832)PDS(0.168)K 202.34 1.5161e-31 24545000.0 8879.8 7924.5 8563.8 8668.8 11296.0 10611.3 10016.1 9426.599999999999 14487.099999999999 12674.8 13534.8 True False 10378.493149733693 8327.823201723819 9778.27561289551 10792.65638915722 9634.373363720719 11734.180722789128 11835.8957195016 10762.849417751753 11205.794981144894 9811.553876969097 10173.73561852334 1.0201260912302017 0.8185610000088203 0.9611293215731087 1.060835153756798 0.9469848367377856 1.1533797577189526 1.16337755995467 1.0579053576108084 1.1014435013174986 0.9644003191025705 1.0 13.312561888514567 -6.155228140849858 3.6037594251479703 1.0590484839761982 0.9135505019904251 0.33176914435650484 0.07828282989172705 0.18733272394552303 4.454768449091453 0.010565180848795309 0.030495861762605696 6.994744559453202e-07 6.155228140849858 -0.14549798198577313 LQQTVPADAS(ph)PDSK ddPTM_A549_PD325901_60min_R1 2 LQQTVPADASPDSK 14 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 LQQTVPADAS(0.811)PDS(0.189)K;LQQTVPADAS(0.978)PDS(0.022)K 208.38 3.6647e-38 35313000.0 9283.5 9767.2 9765.8 10088.900000000001 11548.1 10516.3 9495.599999999999 10602.7 11428.1 11513.3 12362.9 True False 10225.954085848505 10590.316221991385 10428.565914526032 10712.068439445653 10737.001294782238 10430.658739468146 9856.960254191696 10391.220830842754 10947.816699288269 10786.348273127927 10842.34167488012 0.943149957129678 0.9767554408036564 0.9618370484198321 0.9879847694030629 0.9902843515490812 0.9620300717541698 0.9091172875531689 0.9583926740583599 1.0097280668301127 0.9948356726405404 1.0 13.404388755973153 -8.760105584107619 24.992362899311544 1.0045938110461483 0.9618887895497794 0.4129130413474633 0.021318433961718463 24.249336213622264 454376.0803076572 0.003820358521976583 0.004216881140576449 1.7373783922341258e-09 8.760105584107619 -0.0427050214963689 LQRPPS(ph)VDSIIR ddPTM_A549_MK2206_60min_R1 4 LQRPPSVDSIIR 12 1 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 LQRPPS(1)VDSIIR;LQRPPS(0.952)VDS(0.048)IIR;LQRPPS(0.998)VDS(0.002)IIR;LQRPPS(0.999)VDS(0.001)IIR 98.694 6.983199999999999e-05 14081200.0 1350.3000000000002 1725.24 1685.8899999999999 1281.81 2017.3300000000002 1760.0300000000002 1516.77 1381.8 2452.98 2317.49 2490.55 True False 1578.1976283345805 1813.0473469041585 1924.9745525379403 1595.8535075426369 1720.5834293408914 1946.2752063866408 1792.3474756111107 1577.6743815850218 1897.3839466041372 1793.9673994332925 1872.0776993168215 0.8430192982430768 0.9684680008558378 1.028255693254838 0.8524504661986053 0.9190769325273117 1.0396337754020017 0.9574108362410348 0.8427397976914973 1.0135177334234315 0.9582761442476272 1.0 10.870424598906473 LQRPPS(ph)VDSIIR ddPTM_A549_PD325901_60min_R1 2 LQRPPSVDSIIR 12 1 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 LQRPPS(0.981)VDS(0.019)IIR;LQRPPS(0.999)VDS(0.001)IIR 120.66 4.0705e-06 20236400.0 1233.88 1481.63 1367.95 1185.23 1402.08 1466.5700000000002 1380.07 1428.07 1856.05 1724.13 1634.1 True False 1359.1425892655527 1606.4921598809365 1460.7873131515983 1258.4389652473683 1303.6027377134144 1454.6267401597347 1432.589319053281 1399.5860235507575 1778.0466730877386 1615.2681375581326 1433.1160594133728 0.9483827777506728 1.120978408781863 1.0193084527637994 0.8781137835846273 0.9096281694359263 1.0150097269548197 0.9996324510100687 0.976603405116861 1.2406857500540176 1.127102112175982 1.0 10.484939734150512 -8.705755999343761 24.999883232017652 1.1136574558444516 0.9848545507181171 0.3798949553763591 0.07893057393604179 90.36239091129012 40569.267345265274 0.017515236825346895 0.019860406520608644 1.9689922223806872e-09 8.705755999343761 -0.12880290512633452 LQRPTPST(ph)PRPR ddPTM_A549_PD325901_60min_R1 1 LQRPTPSTPRPR 12 2 Q9H4Z2-2;Q9H4Z2 Q9H4Z2-2 ZNF335 Zinc finger protein 335 1 LQRPT(0.063)PS(0.404)T(0.533)PRPR 49.31 0.010869 13371000.0 1101.1 1172.9 1101.7 1055.9 953.67 1010.4 1165.7 1330.2 1076.7 1240.3 1158.6 True False 1212.8828614130216 1271.7443992929084 1176.4679870602843 1121.1205448771086 886.6875091828939 1002.1716373970521 1210.0613513955152 1303.6681174782875 1031.4500433251085 1161.9872463290785 1016.0995449705241 1.193665391758645 1.251594300566093 1.1578274912960542 1.1033569992491543 0.8726384275751405 0.9862927725512602 1.1908885870336825 1.283012204789547 1.0151072780522008 1.1435761900304624 1.0 9.988826031260718 -2.0000000000000004 0.26471276238773844 1.0132245794428982 2.591614465412709 0.04696960577220466 0.11763482559573286 49.0023102236828 0.6034726148347446 0.050144747404150515 35.688857529915616 0.00999999999999999 2.0000000000000004 1.578389885969811 LQRS(ph)PVLK ddPTM_A549_MK2206_60min_R1 2 LQRSPVLK 8 1 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 LQRS(1)PVLK;LQRS(1)PVLK 60.434 0.0031525 10113000.0 4622.4 4248.4 4222.200000000001 4935.700000000001 4987.7 4168.3 4446.4 3756.5 6032.200000000001 6146.1 6641.9 True False 5402.548113170232 4464.625413616443 4820.971448745588 6144.946721571992 4254.015937166237 4609.386739306394 5254.253324866155 4288.995378798767 4665.916331443989 4757.69174134817 4992.532922885466 1.0821256858227777 0.8942605852734337 0.9656363860209212 1.2308274810575472 0.8520756904107908 0.9232561528392225 1.0524223687701644 0.8590820421310141 0.9345789809528774 0.9529615156946089 1.0 12.285556226107396 LQRS(ph)PVLK ddPTM_A549_PD325901_60min_R1 2 LQRSPVLK 8 1 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 LQRS(1)PVLK;LQRS(1)PVLK 72.434 0.0015775000000000001 17979500.0 4164.6 4087.7 4052.8999999999996 4139.6 4342.1 4832.0 4302.4 4418.1 4466.2 4234.3 4670.3 True False 4587.387126183519 4432.184824784399 4327.954166067555 4395.2936902862775 4037.1258754317973 4792.649794044493 4466.130186363618 4329.977529567601 4278.501145628869 3966.9455753698394 4095.8827074709493 1.1199996322687802 1.0821073603255362 1.0566596934461292 1.0731004777722757 0.9856546595116167 1.170114023358782 1.0903950394422506 1.057153692821735 1.044585856383246 0.9685203065346752 1.0 11.999958686578886 -9.380094270937189 0.7868659457014043 1.0073703160657224 1.0797770816090888 0.3843786923021806 0.04428951528744366 0.46960602216237834 0.6273956531696284 0.013608277448592363 0.009618212915756014 4.167789047647751e-10 9.380094270937189 0.07240676554336645 LQS(ph)EPESIR ddPTM_A549_MK2206_60min_R1 2 LQSEPESIR 9 0 P09496-2;P09496-4;P09496-3;P09496;F8WF69 P09496-2 CLTA Clathrin light chain A 1 LQS(1)EPESIR;LQS(0.995)EPES(0.005)IR 88.18700000000001 0.0011256999999999999 6169900.0 2064.27 2219.21 1873.5500000000002 1772.56 2945.0 2560.5299999999997 2092.99 2412.84 2823.2 2435.2 3076.8 True False 2412.6683094439945 2332.1583099877 2139.247562360213 2206.8372795732425 2511.794401217911 2831.483585057746 2473.2591908986174 2754.8674590125943 2183.749707723993 1885.0866286801488 2312.745644639936 1.04320521153532 1.0083937744700784 0.9249817710469694 0.9542066524642911 1.0860659956443088 1.2242952836685899 1.0694038908388783 1.191167504907999 0.9442238980257486 0.8150860139112409 1.0 11.17539089201328 -4.2790412751372315 16.261118150646965 1.0141133131018756 1.0246909341014168 0.0 0.11316390258178503 0.0 0.0 0.013761966252433214 0.0 5.2596727634001096e-05 4.2790412751372315 0.010577620999541182 LQS(ph)EPESIRK ddPTM_A549_MK2206_60min_R1 2 LQSEPESIRK 10 1 P09496-2;P09496-4;P09496-3;P09496;F8WF69 P09496-2 CLTA Clathrin light chain A 1 LQS(1)EPESIRK;LQS(1)EPESIRK 100.19 0.00019151 26300000.0 4708.200000000001 5707.5 4784.700000000001 4882.4 6741.0 4890.5 4671.7 5396.4 6973.900000000001 7514.3 7650.700000000001 True False 5502.829055561636 5997.987371296447 5463.242406994692 6078.588219179266 5749.407829748706 5408.009463948831 5520.487418535719 6161.3562257818885 5394.322785029878 5816.814411092002 5750.820041421859 0.9568772828789633 1.0429794930278287 0.9499936300639196 1.0569950329512254 0.9997544329916461 0.9403892705729199 0.9599478646128542 1.07138741629942 0.938009318006091 1.0114756450723201 1.0 12.489551977299689 -7.029597511456007 24.322558171209238 0.9754164059641864 1.004391184700855 0.0 0.04617497361336331 995.6479426510186 818200.0203579915 0.0065999024450182015 0.011445541741060513 9.341196083052466e-08 7.029597511456007 0.02897477873666865 LQS(ph)EPESIRK ddPTM_A549_PD325901_60min_R1 2 LQSEPESIRK 10 1 P09496-2;P09496-4;P09496-3;P09496;F8WF69 P09496-2 CLTA Clathrin light chain A 1 LQS(1)EPESIRK;LQS(0.998)EPES(0.002)IRK 87.49799999999999 0.00030258 50758000.0 7115.0 7426.0 7268.5 7180.1 8922.2 7405.3 8498.7 8078.6 7307.299999999999 8488.7 8728.5 True False 7837.309562213833 8051.815081549264 7761.784119041186 7623.598469809764 8295.53545191903 7344.9936920193895 8822.12267916709 7917.465985460903 7000.199592820256 7952.7220333093965 7654.949834520302 1.0238224588842075 1.051844264901552 1.0139562357468512 0.9959044323753556 1.0836825362995823 0.959509056335921 1.1524729580046855 1.0342936474588995 0.9144670760940296 1.038899301135362 1.0 12.902177207948753 -8.680571889953011 8.637162964725029 0.959658566721975 1.0403681728210492 0.12271976840781562 0.0556211041082453 0.23531908935666287 22.673660154446132 0.008851087746881349 0.010031733826164818 2.0865467035451867e-09 8.680571889953011 0.08070960609907418 LQS(ph)IGTENTEENRR ddPTM_A549_MK2206_60min_R1 2 LQSIGTENTEENRR 14 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 LQS(0.996)IGT(0.004)ENTEENRR;LQS(0.986)IGT(0.014)ENTEENRR 136.35 1.6869999999999999e-09 46028000.0 3309.5 2885.6000000000004 2699.8999999999996 2783.1 3577.2 2505.9 2425.15 2236.7799999999997 3167.0 3874.2 3659.8 True False 3868.0626904934406 3032.464714605877 3082.7864180920383 3464.9596249381066 3050.9986186881874 2771.0726747182043 2865.7683633499355 2553.850414851458 2449.679556659779 2999.0155292512427 2750.97065465849 1.4060719564359105 1.1023253590403466 1.12061770374455 1.2595407439445232 1.1090625825185123 1.0073072462716655 1.0417298921371798 0.9283452044560241 0.8904782581055508 1.0901663106339263 1.0 11.425725034783504 -7.244834185065157 1.0716671905726904 0.9469774244285784 1.2184259639060298 0.5575526504360206 0.09260370729583799 0.2240946238342276 0.5069755489050545 0.013952700187488258 0.031165438962196798 5.690701620649107e-08 7.244834185065157 0.2714485394774514 LQS(ph)IGTENTEENRR ddPTM_A549_PD325901_60min_R1 2 LQSIGTENTEENRR 14 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 LQS(0.729)IGT(0.271)ENTEENRR;LQS(0.964)IGT(0.036)ENTEENRR 169.28 7.0806e-23 61844000.0 6644.5 7171.0 5781.9 6483.4 7578.5 6929.5 5681.6 6314.2 7238.6 7975.700000000001 7997.0 True False 7319.044748577628 7775.325336626689 6174.294503389181 6883.86489313027 7046.21230440568 6873.068449468402 5897.8163970908145 6188.258327605925 6934.386814909566 7472.112940858526 7013.419697159754 1.04357717983734 1.1086353979037482 0.8803543449552298 0.9815275843135481 1.0046756944061406 0.9799881863981147 0.8409330471808597 0.8823453600120357 0.9887311916778353 1.0654022236662282 1.0 12.775902349033167 -5.7405786162379195 24.999790484113085 0.9699350572244444 1.0761063289721418 0.31731972786130846 0.06485510702217663 226.84256819822488 271846.57385344064 0.008575365416489737 0.033141548801812526 1.8172780615948211e-06 5.7405786162379195 0.10617127174769736 LQS(ph)LSKR ddPTM_A549_PD325901_60min_R1 2 LQSLSKR 7 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 LQS(0.998)LS(0.002)KR;LQS(1)LSKR 70.056 0.0090143 17442800.0 4546.0 4686.8 4526.5 4465.3 5353.1 5026.200000000001 5251.3 5045.4 4922.7 5661.1 6153.9 True False 5007.5065734116815 5081.773084326029 4833.695510055711 4741.11143956791 4977.116723192458 4985.268293631297 5451.1410951216185 4944.765538960267 4715.81603815038 5303.657179870627 5397.0093127862165 0.9278298930387702 0.9415905717054532 0.8956248229188817 0.8784701238768665 0.9221990244487853 0.9237094110289097 1.0100299590380837 0.9162047445879841 0.8737831945144137 0.9827029883579363 1.0 12.397944461411011 -7.532591642036811 24.964204318640327 0.9425379472910506 0.9129368529519768 0.17991331895920115 0.03989444154547651 470.7357086076166 1209889.076043672 0.007957820269736652 0.011810470765900246 2.9336503985423348e-08 7.532591642036811 -0.029601094339073764 LQS(ph)PIKEENTTAVEEIGR ddPTM_A549_MK2206_60min_R1 2 LQSPIKEENTTAVEEIGR 18 1 S4R3Y0;S4R3P6;S4R3N2;A0A087X1L0;S4R2X9;Q9NS73-3;Q9NS73-2;Q9NS73-5;Q9NS73 S4R3Y0 MBIP MAP3K12-binding inhibitory protein 1 1 LQS(0.995)PIKEENT(0.004)T(0.001)AVEEIGR;LQS(1)PIKEENTTAVEEIGR 110.26 7.1175e-10 36936000.0 4538.3 4820.7 4180.9 4410.0 5657.1 4373.2 4001.8999999999996 4705.5 5948.2 5569.5 5748.700000000001 True False 5304.254089217825 5066.053039125502 4773.8144877221375 5490.450197972424 4824.948083915056 4835.969121304784 4728.993428567348 5372.519034989374 4600.942197323556 4311.346081814258 4321.139133951383 1.227512913792121 1.1723883175437 1.1047583379609474 1.2706025026673433 1.1165916982411475 1.1191421917679898 1.0943858278969625 1.2433108188480329 1.064752153239813 0.9977336873834538 1.0 12.0771959688714 -9.171879243218575 0.48059206888143613 0.9949105361139725 1.180355868711181 0.5355692298405956 0.05981355608308836 0.45021919303744534 0.24921303592963384 0.03035933668974503 0.020640409017895746 6.731638053216831e-10 9.171879243218575 0.18544533259720852 LQS(ph)PIKEENTTAVEEIGR ddPTM_A549_PD325901_60min_R1 2 LQSPIKEENTTAVEEIGR 18 1 S4R3Y0;S4R3P6;S4R3N2;A0A087X1L0;S4R2X9;Q9NS73-3;Q9NS73-2;Q9NS73-5;Q9NS73 S4R3Y0 MBIP MAP3K12-binding inhibitory protein 1 1 LQS(1)PIKEENTTAVEEIGR;LQS(0.999)PIKEENT(0.001)TAVEEIGR 222.06 1.8446999999999997e-64 56319000.0 10727.8 10651.0 11581.099999999999 12923.400000000001 14220.4 12931.099999999999 13282.400000000001 13181.3 12871.099999999999 12922.7 14313.900000000001 True False 11816.87835861105 11548.597149687745 12367.063088811712 13721.649066829088 13221.608161716766 12825.793408892547 13787.869000408175 12918.388630970192 12330.172427455936 12106.758516598225 12553.381043288102 0.9413303330682504 0.9199591018439145 0.9851579463864033 1.0930640135523986 1.0532308480181078 1.0217003183974962 1.0983390811497844 1.0290764365730178 0.9822192431614662 0.9644221325593656 1.0 13.615788361848757 -5.911718347668068 4.928716897187647 1.0144894784940939 0.9320933678966228 0.42997556323810837 0.041615505318841436 0.17517620618542676 7.277942913624655 0.006341978290899047 0.02072789550529582 1.2254106553098006e-06 5.911718347668068 -0.0823961105974711 LQS(ph)PLEPHSK ddPTM_A549_MK2206_60min_R1 2 LQSPLEPHSK 10 0 O15211-2;O15211 O15211-2 RGL2 Ral guanine nucleotide dissociation stimulator-like 2 1 LQS(1)PLEPHSK;LQS(1)PLEPHSK 89.62899999999999 0.00020868 9364100.0 2385.0 2489.1000000000004 2691.7 2491.1 3297.1 2584.7 2790.5 2474.6 3908.1000000000004 3589.4 3497.2 True False 2787.5296923483493 2615.784558194305 3073.4235347895633 3101.4196118297295 2812.1009576419583 2858.211238414998 3297.4977291829346 2825.3821281446617 3022.9215899532933 2778.5520470534325 2628.7487221901943 1.060401729848817 0.995068313724148 1.1691583561584689 1.1798083193154043 1.0697488633675876 1.087289634907981 1.2543982242759053 1.074801141811165 1.1499469555365818 1.0569865516618975 1.0 11.360160528338945 -10.844182381323444 1.0354279687037922 0.9984764686086561 1.11838083138507 0.17639854334961713 0.06902058549481281 0.5596327878957889 1.042539408476526 0.04989489459699538 0.011593807165610636 1.4315865803600775e-11 10.844182381323444 0.11990436277641392 LQS(ph)PLEPHSK ddPTM_A549_PD325901_60min_R1 2 LQSPLEPHSK 10 0 O15211-2;O15211 O15211-2 RGL2 Ral guanine nucleotide dissociation stimulator-like 2 1 LQS(1)PLEPHSK;LQS(1)PLEPHSK 97.86 0.00015573 18378700.0 2740.3 2627.1 2830.6 3010.6 3200.8 3348.1 2928.1 3099.3 3203.4 3550.2 3439.5 True False 3018.493238697763 2848.4949368082503 3022.7015377805583 3196.557924431314 2975.9868501605456 3320.8341836590153 3039.5304478177995 3037.4820301461855 3068.772238123577 3326.0397661190777 3016.4633047869143 1.0006729516343287 0.944316124213376 1.0020680619531306 1.05970389872093 0.9865814861522978 1.1009032261022655 1.0076470822616272 1.0069680030007049 1.0173411469165403 1.1026289498834239 1.0 11.558642316778224 -5.98637403181561 22.50311494106792 1.0165762660021107 0.9726688291783853 0.168033274045855 0.04189954823001215 76.73845111396618 126725.39446262959 0.004283765313092116 0.013302757614109305 1.0318723331500925e-06 5.98637403181561 -0.04390743682372544 LQS(ph)PLPGESAAK ddPTM_A549_MK2206_60min_R1 1 LQSPLPGESAAK 12 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 LQS(1)PLPGESAAK 88.09200000000001 0.00027868 10685000.0 3786.8 4322.6 3848.2 3690.2 5333.4 4624.5 4122.8 4468.0 5610.5 5635.2 6043.2 True False 4425.919261628817 4542.601876682616 4393.932624949729 4594.299165659372 4548.863925112259 5113.861520505339 4871.859393612401 5101.35268267613 4339.730708127469 4362.204406183629 4542.50665616487 0.9743341279692291 1.0000209621085787 0.96729250115385 1.0114017465278144 1.001399506798468 1.1257796427364732 1.0725046240715022 1.1230259125218498 0.9553603410218006 0.9603077631737658 1.0 12.149272913113556 -3.5204666241273235 15.84249251321389 1.0047821780290167 0.5327391413263327 0.0 0.06034909628039195 0.0 0.0 0.008545924816180975 0.0 0.00030167087006915087 3.5204666241273235 -0.472043036702684 LQS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 LQSPLR 6 0 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 LQS(1)PLR;LQS(1)PLR 107.01 0.027043 122308000.0 6232.0 5975.0 5584.7 5994.4 8523.8 6649.2 5983.799999999999 7291.2 8961.099999999999 8490.7 8379.900000000001 True False 7283.809242228471 6279.101978711569 6376.6944365045365 7463.02826909884 7269.9603114095835 7352.813930618253 7070.979004438217 8324.749928363517 6931.425157936198 6572.644972952751 6298.939556525682 1.1563548398686359 0.9968506480120831 1.012344122257579 1.1848070936586723 1.1541562268013712 1.1673098089980496 1.122566575053527 1.3216113369017968 1.1004114415981756 1.043452618328987 1.0 12.620893252113463 -9.925867675999871 1.1699443282104018 1.016176132750717 1.13296216508202 0.21176468970105833 0.08322102312698494 0.4453645135998411 1.2307641989151206 0.027091070474860268 0.016289435272210016 1.1861300918556736e-10 9.925867675999871 0.11678603233130302 LQS(ph)PSR ddPTM_A549_MK2206_60min_R1 3 LQSPSR 6 0 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 LQS(0.959)PS(0.041)R;LQS(0.999)PS(0.001)R;LQS(0.689)PS(0.311)R 113.7 0.020791999999999998 2312407100.0 13140.099999999999 14055.0 12981.300000000001 10571.8 15968.6 12749.7 12909.5 12762.4 16594.2 18841.5 19713.6 True False 15357.827635398966 14770.339466241197 14822.243538345183 13161.891474586138 13619.640093476502 14098.864791434087 15254.989046725363 14571.509283210798 12835.64019549217 14585.192064009945 14818.169052318592 1.0364187087605088 0.9967722337416639 1.0002749655515608 0.888226570240586 0.919117607943975 0.9514579528452636 1.0294786753251692 0.9833542343701904 0.8662095937880924 0.9842776130110222 1.0 13.855079577373594 -6.0785721365517675 8.55573344987617 0.942671696752128 1.0121740260034404 0.21643117203753914 0.047171917593907924 0.4056870935480793 41.114867049707165 0.008126291924648475 0.02162154172995835 8.345029253711265e-07 6.0785721365517675 0.06950232925131239 LQS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 LQSPSR 6 0 Q96A00-2;Q96A00;K7EJB8;K7EMN0 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 LQS(0.921)PS(0.079)R;LQS(0.905)PS(0.095)R;LQS(0.77)PS(0.23)R 98.93299999999999 0.03394 3661742000.0 11318.3 12475.0 12398.5 11923.9 13512.599999999999 13182.900000000001 12926.4 12806.099999999999 12997.900000000001 11778.5 13456.199999999999 True False 12467.325483907925 13526.312031016309 13239.936768237223 12660.412221858287 12563.521591939321 13075.542833176572 13418.321225597487 12550.672289308892 12451.643464414823 11034.803499868618 11801.17270587983 1.0564480153481859 1.1461837198837828 1.1219170414852535 1.0728096721735416 1.06459941779173 1.1079867364928742 1.1370328661415088 1.063510602048526 1.0551191627092198 0.9350599109841538 1.0 13.526642609720708 -9.379914500853154 0.5943869478219174 1.0042470946201478 1.102885308828115 0.6212187376546301 0.0361833832915181 0.3321561922396101 0.26341596405079243 0.012825847930584569 0.007985801778218823 4.1695146023333786e-10 9.379914500853154 0.09863821420796715 LQS(ph)TRRR ddPTM_A549_PD325901_60min_R1 1 LQSTRRR 7 2 Q9GZQ4 Q9GZQ4 NMUR2 Neuromedin-U receptor 2 1 LQS(0.956)T(0.044)RRR 46.39 0.02051 22691000.0 3039.7 2594.5 3864.2 3209.0 3015.0 3667.1 3244.1 3881.2 3612.5 2847.8 4874.7 True False 3348.2881062911306 2813.1476203985426 4126.447849322274 3407.2126418322205 2803.236801185343 3637.2363534231304 3367.5560007396357 3803.786421257502 3460.6791878071476 2667.9894219914127 4275.1428032693075 0.7831991258234957 0.6580242461719078 0.9652187164757812 0.7969821824961357 0.6557060033273365 0.8507871013435261 0.7877060850843116 0.8897448801824005 0.8094885591098104 0.6240702462502855 1.0 12.061756896035483 -12.972858105464027 0.22741408530558543 1.3987414350352638 0.7656722643962751 0.0 0.14113252376089785 11.946414296279348 0.3311227634509782 2.318166574310567 0.05739714688652898 1.0644907563508617e-13 12.972858105464027 -0.6330691706389887 LQSFDS(ph)PER ddPTM_A549_MK2206_60min_R1 2 LQSFDSPER 9 0 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 LQSFDS(1)PER;LQS(0.001)FDS(0.999)PER 159.12 9.9424e-06 84897000.0 5261.1 6435.299999999999 5142.0 5633.6 7375.0 5095.0 5260.5 5426.0 8226.0 7911.6 8344.7 True False 6149.045058454462 6762.82928261131 5871.212919674529 7013.832252901912 6290.147269603422 5634.149518212717 6216.264756985073 6195.152116428086 6362.8241342227175 6124.364065155165 6272.480687996258 0.9803210825697692 1.0781745881742513 0.9360272612573138 1.1181911275270071 1.0028165222797691 0.8982330593691384 0.9910376876697659 0.9876717720763721 1.0144031445803174 0.9763862767844712 1.0 12.614820408467134 -4.9035393228027395 16.693777412025913 1.0043664453526835 0.00016963791275689246 0.005483011463938259 0.056968652544310695 13131912.358107721 21399650.132742435 0.007054453236954758 490099362.49357367 1.248707376386831e-05 4.9035393228027395 -1.0041968074399266 LQSFDS(ph)PERK ddPTM_A549_MK2206_60min_R1 2 LQSFDSPERK 10 1 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 LQS(0.205)FDS(0.795)PERK;LQS(0.084)FDS(0.916)PERK 68.03399999999999 0.001795 12133700.0 5405.5 5066.2 5975.3 4475.799999999999 7938.6 5425.6 5845.799999999999 5796.0 7819.1 8551.8 8047.5 True False 6317.816248213413 5324.0479405102205 6822.687389912719 5572.371200926299 6770.842456199827 5999.7333907781995 6907.906190739152 6617.600749505566 6048.0863345369335 6619.94244051695 6049.083650298975 1.044425340010161 0.8801412326720065 1.1278877569457166 0.9211926174389877 1.119317048271465 0.9918416966314664 1.141975642938535 1.0939840035405184 0.9998351294477483 1.0943711185395428 1.0 12.562500895925785 -4.938186361667028 21.82463689549035 1.017376027342671 1.6486999750962348 0.0 0.08489199185931189 1914.875401814579 1737300.2977951153 0.0100207350393774 91271.47161253101 1.1529584015277203e-05 4.938186361667028 0.6313239477535637 LQSFDS(ph)PERK ddPTM_A549_PD325901_60min_R1 1 LQSFDSPERK 10 1 E9PGM9;P78332;P78332-2 E9PGM9 RBM6 RNA-binding protein 6 1 LQS(0.138)FDS(0.862)PERK 46.843999999999994 0.051297 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LQSS(ph)QEPEAPPPR ddPTM_A549_MK2206_60min_R1 2 LQSSQEPEAPPPR 13 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 LQS(0.286)S(0.714)QEPEAPPPR;LQS(0.172)S(0.828)QEPEAPPPR 168.89 2.0990000000000002e-42 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LQSS(ph)QEPEAPPPR ddPTM_A549_PD325901_60min_R1 1 LQSSQEPEAPPPR 13 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 LQS(0.119)S(0.881)QEPEAPPPR 109.1 6.6589e-05 6698100.0 4214.9 5078.8 4446.5 4102.7 4581.6 4340.6 3916.6 4698.8 4298.4 5049.4 4602.7 True False 4642.793545154616 5506.808300050151 4748.266228976632 4356.114461092261 4259.804221661946 4305.251592721343 4065.6483562457565 4605.078747862711 4117.753196088647 4730.580022264002 4036.597078919243 1.150175123844086 1.364220454106988 1.1763042325363648 1.0791551338729517 1.0552958688664722 1.0665547015343997 1.0071969722909009 1.1408319081218958 1.0201050824698938 1.1719227680585267 1.0 11.978923873151171 -6.247096966554612 2.125251701564967 1.026968723564652 1.259948402648827 0.44332846113116564 0.0752726416793317 0.12682630239605164 1.099634770563794 0.008456012888253511 0.02717586849040418 5.661128767854537e-07 6.247096966554612 0.23297967908417494 LQT(ph)ARPSDS(ph)QSK ddPTM_A549_PD325901_60min_R1 1 LQTARPSDSQSK 12 1 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 2 LQT(1)ARPS(0.062)DS(0.819)QS(0.12)K 55.549 0.037917 18894000.0 1971.4 2372.1 2681.5 2288.2 2915.0 2069.6 2439.8 2607.3 2767.6 2769.4 2884.5 True False 2171.5350767320247 2572.0051918856752 2863.4827151694244 2429.5369171207512 2710.26045620407 2052.745863773693 2532.6479241097863 2555.2953561127197 2651.287396588254 2594.5396113712395 2529.7247863520447 0.858407637244784 1.016713440830297 1.1319344818132058 0.9603957435323358 1.0713657354452237 0.8114502711315991 1.001155516115236 1.010108044123467 1.0480536898290453 1.0256212949997063 1.0 11.304764724537328 -8.227938894782739 4.403656555996646 1.0225378384956967 0.982149581387912 0.05560463311002095 0.08422891107501122 0.5816658916984178 26.84391172266412 0.013437929288469331 0.017190638072658443 5.916448727308357e-09 8.227938894782739 -0.04038825710778471 LQT(ph)PKEK ddPTM_A549_PD325901_60min_R1 1 LQTPKEK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LQT(1)PKEK 45.137 0.029198 22813000.0 9511.9 8721.5 9766.6 9622.7 10971.0 9658.3 10006.0 10264.0 10540.0 10542.0 10647.0 True False 10477.54108570931 9456.491413106909 10429.420207336829 10217.072324262674 10200.434807895323 9579.646006999155 10386.783805493298 10059.276468047761 10097.04045383733 9876.37632089102 9337.48649689382 1.1220943761680124 1.0127448555082437 1.1169408609914722 1.0941994216175257 1.0924176234459422 1.0259341215846354 1.1123747069351624 1.0773002425646399 1.081344584240757 1.057712514409147 1.0 13.188818536258376 -10.64258998945384 0.6685992645832732 0.9926756593736994 1.0815073351140565 0.1716329952957757 0.03702693594060506 0.6205895316041122 0.43257602962377495 0.031418786366507384 0.006233314368380861 2.277246328455748e-11 10.64258998945384 0.08883167574035711 LQT(ph)PNT(ph)FPK ddPTM_A549_MK2206_60min_R1 1 LQTPNTFPK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 2 LQT(1)PNT(1)FPK 75.695 0.0077464 3126600.0 1153.8 1311.6 1086.1 1180.7 1439.5 1067.1 1328.0 1271.4 1623.8 1813.3 1684.4 True False 1348.533232298332 1378.3548377034465 1240.125311563303 1469.9715530036378 1227.75145689412 1180.0198137163477 1569.2804100895687 1451.6248434992021 1256.0118926757657 1403.6742706084565 1266.1169929249581 1.0650936997401619 1.0886472935800338 0.9794713430852787 1.1610076803469314 0.9696982693975169 0.9319990335097624 1.2394434470579598 1.1465171477919174 0.992018825822843 1.1086449976204145 1.0 10.306195004842477 -8.831711444667972 24.998463060008863 0.9962308857324015 1.0705310320742747 0.0 0.09203172775514142 69.61996841540521 24765.291339775238 0.014790248193345977 0.015745309177112386 1.4732910660800637e-09 8.831711444667972 0.07430014634187321 LQT(ph)PNT(ph)FPK ddPTM_A549_PD325901_60min_R1 1 LQTPNTFPK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 2 LQT(1)PNT(1)FPK 76.07300000000001 0.007632600000000001 7495600.0 5241.8 5388.0 5775.5 5681.7 7279.4 6566.2 5900.1 7006.0 6607.5 7246.3 6421.6 True False 5773.943677190792 5842.065669187641 6167.460160902855 6032.645704923069 6768.120056566695 6512.727044216671 6124.631534158604 6866.259833899323 6329.809753200202 6788.767381338709 5631.783909876337 1.0252424044653334 1.0373383927147022 1.095116620168454 1.0711784758544711 1.201771972233805 1.1564234616309483 1.0875118136933435 1.2191980274417333 1.1239440032668426 1.205438186190595 1.0 12.459376263855578 -4.250101667700049 14.963852923640918 1.0850128577405587 1.0979872044165715 0.0 0.07753473553360964 0.0 0.0 0.010473582965106771 0.0 5.622096973199889e-05 4.250101667700049 0.012974346676012827 LQT(ph)PNTFPK ddPTM_A549_PD325901_60min_R1 1 LQTPNTFPK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 LQT(0.9)PNT(0.1)FPK 84.479 0.0014306 10258000.0 6535.5 6984.3 6388.2 5809.2 7743.8 8261.8 6515.5 7962.0 7531.2 7437.9 7580.8 True False 7198.979148819187 7572.891472402985 6821.741667367264 6168.021090349559 7199.9022026597195 8194.51863999106 6763.450917918403 7803.191663931829 7214.689854453475 6968.269724640044 6648.409658650573 1.0828122089998231 1.139053076031427 1.0260711986198323 0.9277438375543005 1.0829510472916741 1.2325532060631625 1.0173035756179893 1.1736929678782222 1.0851752862530195 1.048110763688168 1.0 12.698793564829144 -10.486106776986386 0.9736098452043531 1.0034224633836861 1.0842435915972077 0.07291679248444616 0.07824449118684552 0.825028917894529 1.480922447447424 0.04168334495452806 0.014197328783014787 3.265075461465239e-11 10.486106776986386 0.08082112821352161 LQTLS(ph)PALK ddPTM_A549_PD325901_60min_R1 2 LQTLSPALK 9 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 LQT(0.061)LS(0.939)PALK;LQT(0.065)LS(0.935)PALK 109.6 0.0003963 6966300.0 6170.299999999999 5995.7 6780.0 5222.4 7487.5 6115.4 5959.3 6781.200000000001 6446.5 7096.700000000001 7553.299999999999 True False 6796.704313665219 6500.97868091098 7240.131571452053 5544.9757870690555 6961.603830472722 6065.598209954405 6186.084422554083 6645.943646251509 6175.576023307619 6648.613150869604 6624.291984313707 1.0260272840870819 0.981384681759993 1.092966854208216 0.8370669348814233 1.050920437528685 0.9156598507912564 0.9338483927343032 1.0032685246950275 0.9322620497301983 1.0036715118556805 1.0 12.693550549745325 -6.204696429952565 24.99999944974493 0.9626192982860338 1.0282520128936903 0.233206098395218 0.05926791018185554 331.4190323131836 146017.0100672559 0.007440799762058908 0.019686497509586533 6.241709759662804e-07 6.204696429952565 0.06563271460765652 LQTLS(ph)PSHK ddPTM_A549_MK2206_60min_R1 2 LQTLSPSHK 9 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 LQTLS(0.998)PS(0.002)HK;LQT(0.003)LS(0.996)PS(0.001)HK 113.24 7.556199999999999e-05 41285000.0 5601.2 6009.4 5808.0 5397.4 7226.8 5847.200000000001 6026.0 6035.4 9049.7 9568.6 10063.4 True False 6546.545623807781 6315.252791777287 6631.661734241474 6719.763242298492 6163.747293284071 6465.946822942767 7120.846198192569 6890.936432637313 6999.957399401331 7407.046614318689 7564.380044289376 0.8654437753626624 0.8348672005903378 0.876696000916553 0.8883428916784111 0.8148383948447047 0.854788731539757 0.9413654729799508 0.9109717375767669 0.9253841502431983 0.9792007502201764 1.0 12.885006132645428 -9.13184286722666 0.3275649524457534 1.0117495328127464 0.8426711186215531 0.7650737132215724 0.02700808850029376 0.4449531086839242 0.13384307855676134 0.02770720895592979 0.01820207547248683 7.381712607300799e-10 9.13184286722666 -0.1690784141911933 LQTLS(ph)PSHK ddPTM_A549_PD325901_60min_R1 2 LQTLSPSHK 9 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 LQTLS(0.996)PS(0.003)HK;LQT(0.001)LS(0.995)PS(0.004)HK 106.26 0.00016428 92744000.0 7802.0 7852.5 7049.9 8526.3 8877.1 9002.4 7822.1 8762.0 9727.9 8868.6 8823.400000000001 True False 8594.053296471171 8514.257733351145 7528.348608492606 9052.950186367741 8253.603120332473 8929.087439136209 8119.774295917355 8587.235036343978 9319.070192683503 8308.635082475254 7738.177736140971 1.1106042778434584 1.100292345778711 0.9728839095193739 1.1699072436765257 1.0666081087520412 1.1539005362248431 1.0493134912104882 1.1097231582362739 1.2042977701531734 1.0737198557316634 1.0 12.917778150701466 -6.289053587337483 24.963868606254675 1.101879686068627 1.0651632999009244 0.07835720231974352 0.06387421078983285 2054.5965903704255 1857397.5064620588 0.011462830434185247 0.02664049206118931 5.139802279553727e-07 6.289053587337483 -0.036716386167702675 LQTMKEELDFQK ddPTM_A549_MK2206_60min_R1 2 LQTMKEELDFQK 12 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ; 75.045 0.0012882 2856600.0 2876.5 2870.5 2868.0 3333.0 3814.7999999999997 3086.7 3346.3 3035.0 4636.9 4249.3 4036.7 False True 3361.982876327053 3016.5961891031907 3274.725525792792 4149.585149624055 3253.6479734350005 3413.3325452143663 3954.279394791207 3465.2205442976865 3586.649553607747 3289.380178732979 3034.27598274767 1.1080016766578464 0.9941733073243821 1.079244453837513 1.3675701133376879 1.0722979689173429 1.1249248798138145 1.3032036035200838 1.1420254993284353 1.1820446043803434 1.0840741572077768 1.0 11.56713659662594 -10.75359039945779 0.9722916341744606 0.9987842646230909 1.1541208443758373 0.1307001292218274 0.10255858866903508 0.661487494069368 1.0965118783221317 0.07180201392348574 0.017757414782318272 1.7636386205777195e-11 10.75359039945779 0.1553365797527464 LQTMKEELDFQK ddPTM_A549_PD325901_60min_R1 2 LQTMKEELDFQK 12 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ; 107.14 0.00013674 6308900.0 5816.6 5152.6 5267.6 5201.0 6076.700000000001 5616.3 5065.5 5992.7 6134.6 6354.7 6506.6 False True 6407.096950045396 5586.827685051271 5625.091012652044 5522.253957671984 5649.893555476937 5570.562714878333 5258.2703744479595 5873.170897317797 5876.784095646154 5953.463157500113 5706.329448735729 1.122805300255653 0.9790580328812011 0.9857634514772567 0.9677418745767424 0.990109948301128 0.9762076944422696 0.9214803354217412 1.0292379628762993 1.0298711542054746 1.043308699749037 1.0 12.478347326418156 -11.775684054055182 5.191715628117246 0.9996931274437494 1.0048808401371359 0.0 0.0499135309947159 3.1246324679048185 162.4202581899749 0.04944284774875721 0.006492052240092558 1.676161827612514e-12 11.775684054055182 0.00518771269338647 LQTPNT(ph)FPK ddPTM_A549_MK2206_60min_R1 2 LQTPNTFPK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 LQT(0.003)PNT(0.997)FPK;LQT(0.033)PNT(0.967)FPK 115.18 0.00022073 22597000.0 4647.299999999999 6217.5 5238.0 5369.5 7859.900000000001 5872.6 5270.5 5318.299999999999 7990.9 7411.9 7955.6 True False 5431.650624423678 6533.94419291032 5980.827163215712 6685.027741046014 6703.719121946571 6494.034634083615 6228.081627542974 6072.185311610669 6180.9739088451615 5737.546642211885 5980.004956609945 0.9083020271446183 1.0926319025351448 1.0001374926294766 1.11789668897461 1.1210223353638988 1.0859580687981691 1.0414843587476996 1.0154147623069831 1.0336068203443673 0.9594551649777379 1.0 12.545930964883732 -9.034743284995509 0.8225082995997156 1.0086704077001807 1.056516873602842 0.13085580026721289 0.05950256154783442 0.9055097066455486 1.2921178227166552 0.015218671509969828 0.013472170421081241 9.231169278464492e-10 9.034743284995509 0.047846465902661395 LQTPNT(ph)FPK ddPTM_A549_PD325901_60min_R1 2 LQTPNTFPK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 LQTPNT(1)FPK;LQT(0.083)PNT(0.917)FPK 123.8 0.00010129 34717000.0 4964.299999999999 4326.8 5095.200000000001 5546.299999999999 7046.200000000001 5608.3 5697.700000000001 5969.0 6220.0 5268.700000000001 5794.5 True False 5468.272081475493 4691.434620905922 5440.990911926628 5888.882354438783 6551.299220070371 5562.627864225942 5914.529091401072 5849.943612410086 5958.595030632654 4936.033382838033 5081.813234361906 1.0760474321449778 0.923181235623469 1.0706790393507686 1.1588151871894237 1.2891656812124028 1.0946147777751634 1.163861956084603 1.151152815466393 1.1725332584720305 0.9713134181047528 1.0 12.311127639429362 -5.990202736642665 22.445604730167915 1.1139089585907216 0.998943089263394 0.2263820808949185 0.08812008653253042 74.9303703390114 171654.2436145198 0.012901604264395489 0.040005511298987044 1.0228154117931782e-06 5.990202736642665 -0.11496586932732755 LQTPNT(ph)FPKR ddPTM_A549_PD325901_60min_R1 1 LQTPNTFPKR 10 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 LQT(0.02)PNT(0.98)FPKR 50.563 0.016625 9434300.0 2164.1 2393.2 2783.7 2518.2 2503.2 2551.4 2456.8 2456.9 2483.0 2563.4 3318.8 True False 2383.797838873782 2594.8833629361297 2972.618621747947 2673.743494752851 2327.3838675711945 2530.6222443139736 2550.2948684125463 2407.8952020992374 2378.648144865092 2401.5464865274193 2910.6086396065757 0.8190032168653213 0.8915260291699257 1.0213048162152618 0.9186200639857437 0.7996210263038953 0.8694477883004001 0.8762067265619288 0.8272823660774643 0.817233932620571 0.8251011330922299 1.0 11.50710515240993 -10.937129444386674 1.2113793436382032 0.9995906596360432 0.8692426368746295 0.0 0.07764682381611668 0.41269452607601187 1.081730776069189 0.044212669381975996 0.010511727650368317 1.1557677065230087e-11 10.937129444386674 -0.13034802276141366 LQTTDNLLPMS(ph)PEEFDEVSR ddPTM_A549_PD325901_60min_R1 2 LQTTDNLLPMSPEEFDEVSR 20 0 A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224 A0A669KB68 STAT1 Signal transducer and activator of transcription 1-alpha/beta 1 LQTTDNLLPMS(1)PEEFDEVSR;LQTTDNLLPMS(0.999)PEEFDEVS(0.001)R 99.064 1.1323e-07 6749600.0 1097.99 1141.33 1209.56 1100.77 1317.03 1600.87 1347.8000000000002 1078.41 1121.1200000000001 1610.1399999999999 1624.29 True False 1209.4571365024835 1237.5138845979834 1291.6480152751542 1168.762062869946 1224.5263563068427 1587.8330454867566 1399.0912665444598 1056.9002665537212 1074.00322519982 1508.4754856117884 1424.5126272226598 0.8490322327718041 0.868727915041888 0.9067297759188356 0.8204645157471542 0.859610741881786 1.1146500319779677 0.982154345147671 0.741938152288854 0.7539443348380701 1.0589414630552128 1.0 10.47625269477648 -5.070788034978219 0.988589411512944 0.8903235541980116 0.8142762567206036 0.0 0.11519703448239478 16.759593635306636 9.80041610331372 0.01884463543121398 1.4743561203930908 8.49595033585343e-06 5.070788034978219 -0.07604729747740802 LQVEQEENRFS(ph)FR ddPTM_A549_PD325901_60min_R1 1 LQVEQEENRFSFR 13 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 LQVEQEENRFS(1)FR 98.507 4.4633000000000004e-05 4380800.0 575.87 874.79 857.93 826.37 551.99 534.32 657.66 673.66 851.98 711.37 852.63 True False 634.3318984669124 948.5116233757716 916.1542889521926 877.4129980775615 513.2201266621216 529.9686750732313 682.687611185361 660.2233228239533 816.1742434402582 666.453976796836 747.7619152668893 0.8483073094736421 1.2684674145743717 1.2251951727512107 1.1733855123718053 0.6863416231608217 0.708739859911261 0.9129745675021411 0.8829325341988138 1.0914894524267813 0.891264937662634 1.0 9.546435184032081 -4.974966770160931 17.05207541783062 1.0140496188942631 0.4054533037746177 0.019848528119106645 0.18683576155628398 16599024.721107643 287864726.6743004 0.026366868352002498 281285697.4307139 1.059334776581194e-05 4.974966770160931 -0.6085963151196454 LQVVDQPLPVR ddPTM_A549_PD325901_60min_R1 1 LQVVDQPLPVR 11 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 105.98 0.00045854 1512800.0 1694.1 1684.3 2101.7 2134.8 2165.0 2093.0 1992.4 2192.7 2430.8 1900.6 2197.4 False True 1866.0837848694946 1826.2418720513651 2244.334000548788 2266.6617475174294 2012.9378688445336 2075.9553019319374 2068.2218722831153 2148.9648783601256 2328.6419293347035 1780.5957916415757 1927.133730466279 0.9683208567046289 0.9476466750491142 1.1645969166892018 1.1761829040110257 1.0445242263273 1.0772243094046463 1.073211391397679 1.1151093691044334 1.2083447518565706 0.9239606797867381 1.0 10.912240973361753 -5.748658455399472 24.996564410692397 1.1031500845058433 0.9579836702931082 0.267225019128021 0.07878995122636434 197.04854074288005 385374.5362141435 0.010812717543244935 0.04132072816310308 1.7837810447235851e-06 5.748658455399472 -0.14516641421273513 LQWDGSSDLS(ph)PSDSGSSK ddPTM_A549_MK2206_60min_R1 4 LQWDGSSDLSPSDSGSSK 18 0 K7EKG9;Q14CW9;K7EJK2;K7ENU1;Q14CW9-2 K7EKG9 ATXN7L3 Ataxin-7-like protein 3 1 LQWDGS(0.001)SDLS(0.858)PS(0.135)DS(0.006)GSSK;LQWDGSSDLS(0.999)PS(0.001)DSGSSK;LQWDGS(0.001)S(0.004)DLS(0.99)PS(0.004)DSGSSK;LQWDGS(0.007)S(0.011)DLS(0.981)PS(0.001)DSGSSK 176.81 1.1354e-30 13388300.0 4505.56 5706.599999999999 4469.5199999999995 4770.2 7905.5 5935.79 4963.99 5640.7 7878.1 8557.7 8678.8 True False 5265.988377633975 5997.0415651406565 5103.365143668554 5938.899214142415 6742.611422352528 6563.911357941488 5865.882728072675 6440.286498919257 6093.7229287405735 6624.509626419231 6523.614437305342 0.807219437666392 0.9192820364806549 0.7822910432114012 0.9103694387854641 1.0335698847857793 1.0061770849616292 0.8991767959995577 0.987226722365814 0.9341022507237046 1.015466148418723 1.0 12.671455802177073 -6.521390482371243 23.045370795369898 0.9709039372000648 0.8448599833164335 0.6336507752070333 0.048279011670753116 10.18608986869796 157725.4622338004 0.006535285249277099 0.013783376620526117 3.010298191077195e-07 6.521390482371243 -0.12604395388363132 LQWDGSSDLS(ph)PSDSGSSK ddPTM_A549_PD325901_60min_R1 2 LQWDGSSDLSPSDSGSSK 18 0 K7EKG9;Q14CW9;K7EJK2;K7ENU1;Q14CW9-2 K7EKG9 ATXN7L3 Ataxin-7-like protein 3 1 LQWDGSS(0.001)DLS(0.992)PS(0.007)DSGSSK;LQWDGSS(0.002)DLS(0.969)PS(0.028)DS(0.001)GSSK 228.01 3.4904e-64 20823000.0 7499.5 7149.0 6553.9 6944.8 6917.1 7964.4 6111.9 6047.3 8860.8 8084.9 9270.9 True False 8260.843719159893 7751.471319417679 6998.687065802307 7373.764523214839 6431.266758699548 7899.540566988404 6344.491699060011 5926.681857484922 8488.41139026203 7574.418034222334 8130.638073077191 1.016014197768051 0.9533656829572775 0.860779560336957 0.9069109283847511 0.7909916418485364 0.971576953246263 0.7803190404045154 0.7289319490323666 1.0440031045496327 0.9315896201681076 1.0 12.989152860669913 -8.806357941991083 24.999921649601887 1.0207793208298572 0.8763535032588633 0.2438997384235393 0.08678510664423417 95.96791466784266 53411.58164881374 0.014402810721253474 0.015332991346208467 1.561859839797834e-09 8.806357941991083 -0.14442581757099393 LQYKT(ph)PPPSYNSALAQPVTTVPSMGETER ddPTM_A549_MK2206_60min_R1 2 LQYKTPPPSYNSALAQPVTTVPSMGETER 29 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 LQYKT(0.951)PPPS(0.039)YNS(0.009)ALAQPVTTVPSMGETER;LQYKT(0.536)PPPS(0.397)YNS(0.066)ALAQPVTTVPSMGETER 121.2 4.4116e-21 14715000.0 887.3199999999999 1345.5 1286.02 772.76 2172.96 1407.3400000000001 1226.3200000000002 1098.83 1897.58 1605.3899999999999 1784.5900000000001 True False 1037.0779231088204 1413.9802029048392 1468.3969737378136 962.0862346905147 1853.3204625027065 1556.2637846833154 1449.1264702568067 1254.592517525742 1467.7811598125866 1242.7312840082227 1341.4270508216277 0.7731154090515823 1.0540865431622035 1.0946528719831738 0.7172109986161636 1.3816036148723425 1.1601553612103614 1.08028719815156 0.9352670476991654 1.094193798249086 0.9264247975669243 1.0 10.389552885082747 -5.261181585371012 23.987807448604716 1.0521008852237632 0.7731152571599945 0.1977793184602722 0.15636178275863027 13.182634342936458 1225373.095585918 0.019223448261360264 0.15492348476392195 5.480477695948001e-06 5.261181585371012 -0.2789856280637687 LQYKT(ph)PPPSYNSALAQPVTTVPSMGETER ddPTM_A549_PD325901_60min_R1 3 LQYKTPPPSYNSALAQPVTTVPSMGETER 29 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 LQYKT(0.716)PPPS(0.262)YNS(0.021)ALAQPVTTVPSMGETER;LQYKT(0.913)PPPS(0.012)YNS(0.074)ALAQPVTTVPSMGETER;LQYKT(0.99)PPPS(0.009)YNSALAQPVTTVPSMGETER 140.34 2.934e-29 40273000.0 2722.3199999999997 2494.65 3133.0699999999997 2512.13 3374.6 3064.5 3566.5 3570.5 3120.04 3603.4 3352.51 True False 2998.6879223339374 2704.882910474936 3345.6989708804253 2667.2985646388215 3137.5797377379968 3039.543728031738 3702.2251091636845 3499.2835764969377 2988.9155690313655 3375.8807090399105 2940.17252331187 1.0199020290673808 0.9199742154681798 1.1379260721448285 0.9071911744941832 1.0671413710797362 1.0337977461975374 1.2591863503960044 1.1901626686026143 1.0165782944140265 1.148191367096122 1.0 11.521685096602605 -4.140604021220003 13.141682823027557 1.0355850477613946 0.9980322896398559 0.0 0.10861483593098768 0.0 0.0 0.01363282252745146 0.0 7.234291074439393e-05 4.140604021220003 -0.03755275812153869 LQYKTPPPS(ph)YNSALAQPVTTVPSMGETER ddPTM_A549_MK2206_60min_R1 2 LQYKTPPPSYNSALAQPVTTVPSMGETER 29 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 LQYKT(0.373)PPPS(0.591)YNS(0.036)ALAQPVTTVPSMGETER;LQYKT(0.325)PPPS(0.55)YNS(0.124)ALAQPVTTVPSMGETER 107.36 3.3783e-15 17619300.0 938.79 1480.56 1191.33 1662.13 2183.1099999999997 1743.85 1770.28 1304.56 1972.09 2487.7 2281.67 True False 1097.234800788136 1555.9141800169375 1360.278507894955 2069.3519246158517 1861.9774109483287 1928.383049526055 2091.9169611245175 1489.4853750474433 1525.4147637806072 1925.726842217315 1715.0683681115454 0.6397615518944569 0.9072024234988066 0.7931336926193514 1.2065710983256057 1.0856578347360837 1.1243767801801332 1.2197280295175161 0.8684699704930768 0.8894192162498076 1.1228280329942326 1.0 10.744050372645898 -5.235433382524382 1.3660539125551507 0.9927168002127796 0.49364078433776665 0.4100386255092362 0.1345792475281637 1.1948749448396203 1.838852931408095 0.020092167626734048 0.8338820463110506 5.815226266224167e-06 5.235433382524382 -0.499076015875013 LQYKTPPPS(ph)YNSALAQPVTTVPSMGETER ddPTM_A549_PD325901_60min_R1 1 LQYKTPPPSYNSALAQPVTTVPSMGETER 29 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 LQYKT(0.099)PPPS(0.446)Y(0.009)NS(0.446)ALAQPVTTVPSMGETER 71.907 2.8321999999999998e-05 17628000.0 1263.4 1428.6 2025.5 1138.1 2004.7 1567.8 1653.2 1337.3 1546.6 1552.9 1703.1 True False 1391.6594379340765 1548.9931356721365 2162.9626103209634 1208.3978521873646 1863.8967878395536 1555.0323566024338 1716.1134306657527 1310.6265024084446 1481.6017804463772 1454.8496289804289 1493.6294968404118 0.931730017971632 1.037066514118019 1.4481252645963694 0.8090345395183883 1.2478976826464638 1.0411098333903503 1.1489552357502166 0.8774776510378998 0.991947322666379 0.97403648766845 1.0 10.544606608584946 -8.240623369529052 24.890585646657858 0.9871871125059009 1.0990381186908549 0.1333291825352737 0.15903084738495832 1294.715574526372 1548147.4911337602 0.0232381323473878 0.029983619798490718 5.746145655667943e-09 8.240623369529052 0.11185100618495403 LRAES(ph)PSPPR ddPTM_A549_MK2206_60min_R1 2 LRAESPSPPR 10 1 P50219 P50219 MNX1 Motor neuron and pancreas homeobox protein 1 1 LRAES(0.988)PS(0.012)PPR;LRAES(0.89)PS(0.11)PPR 69.229 0.0010335999999999998 7641300.0 868.41 1157.6 1480.9 1505.5 1267.4 1032.0 1148.9 1282.7 2009.4 1657.5 1748.4 True False 1014.9763774139329 1216.5168954906292 1690.9138881264116 1874.3475675844622 1080.967138914628 1141.205555013842 1357.6402583975196 1464.5266531039995 1554.2741083524338 1283.069598816255 1314.2240266148165 0.7723008839127018 0.925654128104885 1.2866253042731797 1.4262009593694724 0.8225136027218949 0.8683493315468931 1.033035639969644 1.1143660619843734 1.1826553744843178 0.9762944314153126 1.0 10.359995507459052 -8.214365397081961 9.31385933888062 1.0907643182751063 1.0281512489169315 0.008850115117337576 0.1905507822287994 2.086218138430803 401.1527408492594 0.03240892471770189 0.041810194337505865 6.104282201995196e-09 8.214365397081961 -0.06261306935817479 LRAS(ph)FSR ddPTM_A549_PD325901_60min_R1 2 LRASFSR 7 1 Q494U1-3;Q494U1;Q494U1-2 Q494U1-3 PLEKHN1 Pleckstrin homology domain-containing family N member 1 1 LRAS(0.994)FS(0.006)R;LRAS(0.995)FS(0.005)R 64.84100000000001 0.007103 8898700.0 1406.4 1539.02 1207.83 1431.8600000000001 1780.8 1444.31 1391.48 1795.0 1659.67 1519.47 1824.89 True False 1549.1766926630405 1668.7186165911605 1289.8006070718188 1520.3027402099988 1655.7227514264862 1432.5480182194535 1444.4335328470718 1759.1973168497404 1589.9198415578937 1423.5304048856267 1600.4400989308317 0.9679691815382296 1.0426623387566596 0.805903706070265 0.9499279237165025 1.0345421565809216 0.8950963045580164 0.9025227084800115 1.0991959761724077 0.9934266472203702 0.8894618460488531 1.0 10.644252965548922 -8.213390928759948 24.99972403301702 1.0044818387348695 0.9432309847856493 0.09582936770259765 0.07631081078438254 552.8458503648724 287647.36935530225 0.010556981848387987 0.01362896877906011 6.1179943452730164e-09 8.213390928759948 -0.06125085394922025 LRAS(ph)IRR ddPTM_A549_PD325901_60min_R1 2 LRASIRR 7 2 Q8WVC0-2;Q8WVC0;Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5 Q8WVC0-2;Q07866-6 LEO1;KLC1 RNA polymerase-associated protein LEO1;Kinesin light chain 1 1 LRAS(1)IRR;LRAS(1)IRR 42.312 0.032538 230850000.0 4888.200000000001 4927.1 5045.2 5207.6 5960.3 5850.4 5824.3 5658.8 6043.2 5159.700000000001 6237.6 True False 5384.446465497357 5342.324008658956 5387.597611252199 5529.261624682293 5541.669089918736 5802.756282093938 6045.946923679254 5545.930794757281 5789.225319794094 4833.915661440089 5470.414743404233 0.9842848701717672 0.9765848220375395 0.9848609043305376 1.0107572979450985 1.0130254011545314 1.0607525305262118 1.1052081436730092 1.0138044471754355 1.0582790503725983 0.8836470154787475 1.0 12.417434500782269 -6.563432530069589 1.8208914351287078 1.035186089003564 0.9806902084844813 0.041466779111426266 0.05316624388964102 0.31451256135868333 2.0707175905188917 0.004838284608639917 0.013112357206483802 2.732545926276728e-07 6.563432530069589 -0.05449588051908272 LRDLEDSLAR ddPTM_A549_PD325901_60min_R1 2 LRDLEDSLAR 10 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 175.15 1.0537000000000001e-10 16616700.0 1814.54 1874.8400000000001 1773.46 1786.1399999999999 1688.4299999999998 1834.93 1671.6999999999998 2132.28 1762.77 1930.8 2496.17 False True 1998.7507650062525 2032.8393465515514 1893.8176602813214 1896.4658111817412 1569.8405015672854 1819.9869384491035 1735.3174582893412 2089.7500026587004 1688.686907097801 1808.8889584876108 2189.156914525354 0.9130230691752927 0.9285946261153716 0.8650899566475038 0.8662996236580542 0.717098208516338 0.8313643148982344 0.7926875624014312 0.9545912350060084 0.7713868731351022 0.8262947925228139 1.0 11.096159652472013 -10.98153245103694 1.2132194862920076 1.0012508325297367 0.841534758978987 0.0 0.08380885454143086 0.3825567682859868 0.9885587474216132 0.051415207053338796 0.011430699178882193 1.0434401626374445e-11 10.98153245103694 -0.15971607355074968 LRDTESGWDDTAVVNDLSSTSSGTESGPQSPLT(ph)PDGKR ddPTM_A549_MK2206_60min_R1 2 LRDTESGWDDTAVVNDLSSTSSGTESGPQSPLTPDGKR 38 2 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 E9PP16 PPFIBP2 Liprin-beta-2 1 LRDTESGWDDTAVVNDLSSTSSGT(0.005)ES(0.004)GPQS(0.015)PLT(0.975)PDGKR;LRDTESGWDDTAVVNDLSS(0.001)T(0.001)S(0.003)S(0.011)GT(0.052)ES(0.044)GPQS(0.176)PLT(0.711)PDGKR 117.83 2.8893000000000004e-21 14070900.0 1841.43 1671.17 1600.3400000000001 1322.09 3110.8 1856.51 1487.66 1894.37 2506.2 2516.1000000000004 3126.9 True False 2152.2183653589173 1756.2254148558013 1827.2922761322325 1646.002109350876 2653.205440851842 2052.964655948399 1757.948565417053 2162.9027487648123 1938.5497015790131 1947.7112624926583 2350.4044319502805 0.915680014938146 0.7472013713820941 0.7774373853677647 0.7003059077731074 1.1288293217905092 0.8734516613572428 0.7479345007694573 0.9202257787482616 0.8247728242966572 0.8286706900380195 1.0 11.198693306034244 -14.999999999513774 0.25908032736309455 2.054080861702993 0.8301890049159755 0.0 0.12353397360489553 51.52973738232897 0.6688255957852496 27.95151536755883 0.05295078763853515 1.0000000011195771e-15 14.999999999513774 -1.2238918567870174 LREDLER ddPTM_A549_MK2206_60min_R1 1 LREDLER 7 1 P62269;J3JS69 P62269 RPS18 40S ribosomal protein S18 0 64.265 0.026185000000000003 10251000.0 656.05 700.8 651.59 651.97 702.21 611.81 562.6 638.12 768.93 848.38 809.87 False True 766.7752011174568 736.4677266411834 743.9952598853997 811.702679268045 598.9158392119621 676.5513281133899 664.8171375876441 728.5754641605402 594.7685827288929 656.7303687745008 608.756927725086 1.2595753184820127 1.209789479346626 1.2221548963158366 1.3333773174481376 0.9838341248125094 1.1113653041151423 1.0920896458165232 1.1968249246595253 0.977021460686341 1.0788055771762477 1.0 9.249722475101542 -7.283843606341847 0.42143023610921615 0.9819715780474711 1.2860418894897212 0.41284950628887773 0.08750062069262371 0.7400749861818368 0.23751489475941384 0.02618161067003903 0.0890328438533473 5.201832858592259e-08 7.283843606341847 0.30407031144225005 LREDLER ddPTM_A549_PD325901_60min_R1 2 LREDLER 7 1 P62269;J3JS69 P62269 RPS18 40S ribosomal protein S18 0 ; 113.26 0.007677 25760000.0 3816.3999999999996 4083.6000000000004 3778.2999999999997 3230.7 4107.2 3856.0 4229.4 3565.8999999999996 4478.1 4113.3 4478.4 False True 4203.838118514809 4427.739303395445 4034.718158763616 3430.2530015479456 3818.7244410707913 3824.598014452724 4390.352131416482 3494.775327105567 4289.901030012233 3853.5855360198316 3927.58519091662 1.07033658448379 1.127343924616973 1.0272770576930486 0.8733745634546995 0.9722830328168075 0.9737784996485688 1.1178248002284226 0.889802552262388 1.0922490083559602 0.981158994318461 1.0 11.939426853161827 LREELSEAMSEVEGLEANEGS(ph)KTLQR ddPTM_A549_PD325901_60min_R1 1 LREELSEAMSEVEGLEANEGSKTLQR 26 2 M0QZ92;F8W8E2;A0A286YF81;G5E9B7;A0A0D9SFG6;Q99418-2;Q99418 M0QZ92 CYTH2 Cytohesin-2 1 LREELSEAMSEVEGLEANEGS(0.543)KT(0.457)LQR 64.532 0.00014651 5184300.0 622.29 607.91 631.83 703.6 513.03 687.7 665.82 758.42 704.64 827.37 888.37 True False 685.4644226943142 659.1407091603305 674.7097833024418 747.0597740084613 476.996542657418 682.0995992062082 691.1581444506838 743.2927181310196 675.0264312516065 775.1297170001526 779.106121841416 0.879808800724374 0.8460217301366502 0.866004982360768 0.9588678012730626 0.6122356496571192 0.8754899750935944 0.8871168189734316 0.9540327014428388 0.8664114070316669 0.9948961961281152 1.0 9.605676040560915 -10.955409679841011 0.3440300065104163 1.0652461427247149 0.8438248846281399 0.29471067499231196 0.08484320236717044 3.4830267361414275 0.4582370954612063 0.2958627567584116 0.03202136938067386 1.1081289988353863e-11 10.955409679841011 -0.22142125809657498 LREELSEAMSEVEGLEANEGSKT(ph)LQR ddPTM_A549_PD325901_60min_R1 1 LREELSEAMSEVEGLEANEGSKTLQR 26 2 M0QZ92;F8W8E2;A0A286YF81;G5E9B7;A0A0D9SFG6;Q99418-2;Q99418 M0QZ92 CYTH2 Cytohesin-2 1 LREELSEAMSEVEGLEANEGS(0.268)KT(0.732)LQR 78.642 2.4341e-06 3214600.0 404.11 567.27 482.47 505.02 819.15 847.21 727.43 544.74 415.05 691.87 852.42 True False 445.13494970994145 615.0758337342378 515.2133155277987 536.2139384163631 761.6157299140873 840.3106026515804 755.1127467149691 533.8747333597373 397.6068918752547 648.1852101247275 747.5777439355903 0.5954363319680278 0.8227583535274846 0.6891769046192852 0.7172684617301317 1.0187779613456582 1.1240444348005896 1.0100792229845035 0.7141394158541654 0.5318602581479628 0.8670472273724802 1.0 9.546079809163171 -4.543663977401294 1.028861003931461 0.8199957781642752 8.421429018778938e-12 0.13316404986495434 0.17180889782372272 15.71116413217959 4.489260670386644 0.03304588699508853 20.280586493676356 2.8598023756807885e-05 4.543663977401294 -0.8199957781558538 LREQDCGEPAS(ph)PAASISR ddPTM_A549_MK2206_60min_R1 2 LREQDCGEPASPAASISR 18 1 O60353-2;O60353 O60353-2 FZD6 Frizzled-6 1 LREQDCGEPAS(1)PAASISR;LREQDCGEPAS(0.997)PAAS(0.002)IS(0.001)R 116.65 1.3588e-10 13480400.0 2778.2 3234.8999999999996 3082.3999999999996 2678.5 3906.3 3046.3 2780.3999999999996 2739.9 4392.200000000001 3869.3 4555.4 True False 3247.0922395313105 3399.5425926249477 3519.5306697014307 3334.732620242435 3331.6884446443205 3368.6574440297163 3285.562689919454 3128.2892155918366 3397.373712902142 2995.2224426544426 3424.168457355943 0.9482863591467792 0.9928082204372589 1.0278497432393043 0.9738810054974434 0.9729919792605551 0.9837884689326615 0.9595213351321165 0.9135909212852873 0.992174817101583 0.8747298738238125 1.0 11.741537963800019 -8.974290123355695 24.999801809749503 0.9965477516747073 0.9729612750694937 0.0 0.04541781379108616 271.07743385542597 263592.94000535953 0.004880819602438846 0.005076762304682132 1.0609865456207476e-09 8.974290123355695 -0.023586476605213624 LREQDCGEPASPAAS(ph)ISRLSGEQVDGK ddPTM_A549_MK2206_60min_R1 1 LREQDCGEPASPAASISRLSGEQVDGK 27 2 O60353-2;O60353 O60353-2 FZD6 Frizzled-6 1 LREQDCGEPASPAAS(0.358)IS(0.358)RLS(0.283)GEQVDGK 107.52 2.9933e-13 9069200.0 1456.7 1859.3 1678.7 1683.4 2088.8 1925.7 1687.3 1662.0 2268.5 2566.3 2780.0 True False 1702.5553471043354 1953.9304282876026 1916.764902422722 2095.8330755706975 1781.5402870166276 2129.476295823794 1993.8605692350375 1897.5935896615335 1754.6883720501123 1986.5710476272448 2089.6492759032203 0.8147565080596746 0.9350518533513452 0.9172663204901829 1.002959252415602 0.852554688272549 1.0190591887259928 0.9541603905627754 0.9080919040068705 0.8397047257088986 0.9506719957915323 1.0 11.029045107171616 LREQDCGEPASPAASISRLS(ph)GEQVDGK ddPTM_A549_PD325901_60min_R1 2 LREQDCGEPASPAASISRLSGEQVDGK 27 2 O60353-2;O60353 O60353-2 FZD6 Frizzled-6 1 LREQDCGEPASPAAS(0.276)IS(0.219)RLS(0.505)GEQVDGK;LREQDCGEPASPAAS(0.081)IS(0.081)RLS(0.839)GEQVDGK 125.56 7.065899999999999e-19 26257000.0 4113.299999999999 3904.1 4105.3 4414.9 4109.0 4723.4 4299.1 4716.5 3715.6 4401.4 4282.9 True False 4530.879187948585 4233.1122084401395 4383.910345174357 4687.5983460346115 3820.3980152804534 4684.9341964382775 4462.704603057787 4622.42570747733 3559.446253347055 4123.494852852375 3756.130451540015 1.2062624678253449 1.1269875375879348 1.1671347419195601 1.2479860341678746 1.0171100457158213 1.247276753797902 1.1881122502622548 1.2306350290848216 0.9476364836816784 1.0978039517135887 1.0 11.875031453756455 -8.766080406030474 24.999606585096398 0.9752727722423621 1.1763040693001359 0.47901927075037143 0.07287116659914111 45.33673523777453 244212.77958765617 0.010370748915300354 0.011218885896088802 1.71364001186548e-09 8.766080406030474 0.20103129705777378 LREQGT(ph)ESRSST(ph)PLPTISSSAENTR ddPTM_A549_PD325901_60min_R1 1 LREQGTESRSSTPLPTISSSAENTR 25 2 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 LREQGT(0.521)ES(0.396)RS(0.115)S(0.106)T(0.86)PLPT(0.002)ISSSAENTR 90.363 7.2346999999999994e-09 25903000.0 2544.9 2279.5 1988.4 2856.1 2467.8 2883.9 2374.4 2598.5 2650.3 2678.0 3330.2 True False 2803.2563745436382 2471.601464905945 2123.344781220542 3032.5148103262745 2294.4702414478247 2860.4144745539966 2464.7590913215345 2546.670879016186 2538.917107666516 2508.9106229696617 2920.606511877128 0.9598199425851219 0.8462630809233527 0.7270218608996488 1.0383168009774864 0.7856143003574714 0.9793905693634694 0.8439202889188205 0.8719664455515418 0.869311595842025 0.8590375364729083 1.0 11.512052284183754 -10.694419168960936 0.7579180159931134 1.0078476836918173 0.8772685224403365 0.0 0.09302810552230917 0.8732929498503619 0.807405601627794 0.0701549839974447 0.014648132029650216 2.0210675587812702e-11 10.694419168960936 -0.13057916125148084 LREQGTES(ph)R ddPTM_A549_MK2206_60min_R1 4 LREQGTESR 9 1 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 LREQGT(0.002)ES(0.998)R;LREQGTES(1)R;LREQGTES(1)R;LREQGT(0.031)ES(0.969)R 136.81 3.6738e-05 2604520000.0 11995.599999999999 10375.8 10468.0 8765.8 10891.199999999999 8606.2 7004.830000000001 7524.799999999999 11838.9 11499.2 11711.1 True False 14020.164015737459 10903.883901374986 11952.519806136326 10913.421393511713 9289.118907485397 9516.90237166679 8277.516939011826 8591.46344373351 9157.408052838475 8901.522733458756 8802.9106600828 1.592673668643774 1.238668018161214 1.3577917881565664 1.239751465728162 1.0552326686225877 1.0811085945494845 0.9403159089807198 0.9759798520609658 1.0402704748968041 1.0112022122209097 1.0 13.103764910748849 -5.596847690203006 0.5718123268215402 1.0063466443616291 1.735699360243467 0.8588053063420459 0.0712585655978869 0.6846756313837695 0.1879844417684086 0.012583963754575475 0.3047531839179206 2.5301851926708725e-06 5.596847690203006 0.7293527158818378 LREQGTES(ph)R ddPTM_A549_PD325901_60min_R1 6 LREQGTESR 9 1 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 LREQGTES(1)R;LREQGT(0.002)ES(0.998)R;LREQGTES(1)R;LREQGT(0.001)ES(0.999)R;LREQGT(0.008)ES(0.992)R;LREQGT(0.005)ES(0.995)R 135.16 3.7873e-05 2854447400.0 17122.3 20001.5 19559.9 18174.600000000002 21987.2 18565.500000000004 18822.2 20696.399999999998 19726.2 22010.699999999997 23321.899999999998 True False 18860.543291228947 21687.096600270343 20887.352437233792 19297.203764488593 20442.894923722175 18414.30872337192 19538.48912090304 20283.594065988276 18897.17641370833 20620.94064563044 20453.454149704896 0.9221202029340883 1.0603146266413512 1.0212139369884943 0.9434691873190042 0.9994837436305166 0.9003031267282354 0.9552659896903009 0.9916952861617718 0.9239112511458599 1.0081886655769563 1.0 14.32005688354 -6.258354142754918 24.844530285511198 0.9615679047586468 1.0071260931886896 0.10662929254537501 0.04450531660730778 328.94910192134347 2648910.5964462045 0.006047687054251915 0.015354134475939026 5.516274346418597e-07 6.258354142754918 0.04555818843004278 LREQGTES(ph)RS(ph)STPLPTISSSAENTR ddPTM_A549_MK2206_60min_R1 1 LREQGTESRSSTPLPTISSSAENTR 25 2 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 LREQGT(0.136)ES(0.684)RS(0.437)S(0.39)T(0.349)PLPT(0.003)ISSSAENTR 59.598 0.00020971 21000000.0 1476.0 1590.4 1162.8 1196.9 1273.0 962.1 1026.0 1092.5 1652.7 2247.5 2005.0 True False 1725.112715264638 1671.3445668523643 1327.7025248925593 1490.140553730882 1085.7433863329024 1063.9087834097065 1212.4109192408857 1247.3652206409297 1278.3660888195827 1739.7881890434592 1507.1031648150922 1.1446546962007698 1.1089782079101553 0.8809632650830882 0.988744890542187 0.7204174284021978 0.705929632587719 0.8044644504410138 0.8276574887253787 0.848227326877405 1.1543922338302006 1.0 10.557562460903029 -5.734295637983921 4.844004334396587 0.8846464885688057 1.1349639152293889 0.371689526668875 0.12328140655984074 0.13594474256042885 7.739521855863981 0.015569455706158159 0.06085016363994844 1.8437598862429953e-06 5.734295637983921 0.2503174266605832 LREQGTES(ph)RSST(ph)PLPTISSSAENTR ddPTM_A549_MK2206_60min_R1 1 LREQGTESRSSTPLPTISSSAENTR 25 2 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 LREQGT(0.146)ES(0.629)RS(0.237)S(0.236)T(0.709)PLPT(0.037)IS(0.003)S(0.001)S(0.001)AENTR 65.134 0.00012444 20557000.0 2208.6 2140.4 2390.8 1674.9 2254.4 1961.8 2046.0 1663.2 3132.7 3197.9 3798.1 True False 2581.357684914283 2249.337217612425 2729.851390190171 2085.250575189118 1922.7807463856216 2169.396373862554 2417.7317161470314 1898.9636933363802 2423.148451893934 2475.492168961994 2854.9269477726684 0.9041764402862159 0.7878790801870754 0.9561895768716332 0.7304041796291741 0.673495603061129 0.7598780681779106 0.8468629006543498 0.665153164363066 0.8487602296739692 0.8670947503204247 1.0 11.479238114861596 -9.914338889043872 0.8762766054728508 0.9835826507282359 0.7921051155628326 0.21209963451763658 0.09266391095315388 0.359647156964207 0.5654515159893057 0.03385408151811447 0.017560679079814696 1.2180387669372365e-10 9.914338889043872 -0.19147753516540333 LREQGTES(ph)RSST(ph)PLPTISSSAENTR ddPTM_A549_PD325901_60min_R1 1 LREQGTESRSSTPLPTISSSAENTR 25 2 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 LREQGT(0.06)ES(0.756)RS(0.218)S(0.258)T(0.705)PLPT(0.001)ISSSAENTR 87.709 1.5298e-08 30416000.0 2513.2 2473.9 2651.7 2588.9 2690.5 3631.1 3138.1 3367.4 2606.8 2896.4 3617.1 True False 2768.3382138799443 2682.3842351528037 2831.660307967464 2748.810473181501 2501.5285617211143 3601.5295254873677 3257.5221127342083 3300.234565325803 2497.2452613911914 2713.520809697285 3172.219630686075 0.8726817610926956 0.8455859137889101 0.8926432081107335 0.8665259008522683 0.7885735708596235 1.1353342280113319 1.0268904716505032 1.0403550036073768 0.787223317463393 0.8554013043259604 1.0 11.63127694508997 LREQVVK ddPTM_A549_MK2206_60min_R1 1 LREQVVK 7 1 P15121;E9PCX2;E9PEF9 P15121 AKR1B1 Aldose reductase 0 100.19 0.011414 2872500.0 1280.4 1400.3 1345.0 1194.2 1884.8 1350.1 1554.2 1303.0 2250.8 1915.6 1763.7 False True 1496.5002172255038 1471.5692888351139 1535.741224613427 1486.779053609676 1607.5484167794623 1492.9666858761514 1836.5780221093435 1487.704240270143 1740.9973937890213 1482.8646295580202 1325.724614356298 1.128816800276523 1.1100112895992584 1.1584164674796371 1.1214840831265531 1.2125809533679082 1.126151441791746 1.3853390079817511 1.1221819555583146 1.31324211298163 1.1185314155745847 1.0 10.372565407952798 -6.713962858722472 24.91222869262621 1.169438379682814 1.1303295043773163 0.05289790955704432 0.09809269185911769 513.0236788851577 269194.2518199175 0.01821742328929916 0.03792246605926444 1.93213354785182e-07 6.713962858722472 -0.03910887530549778 LREQVVK ddPTM_A549_PD325901_60min_R1 1 LREQVVK 7 1 P15121;E9PCX2;E9PEF9 P15121 AKR1B1 Aldose reductase 0 96.492 0.011888 5017200.0 2236.7 2143.8 2084.6 2838.3 2952.5 2493.7 2227.3 2760.9 2484.6 2746.8 2418.2 False True 2463.768137428487 2324.4655496667538 2226.073491718136 3013.615344753008 2745.1265855720458 2473.3921339836 2312.061120325325 2705.8316836158488 2380.180902429242 2573.3665792281804 2120.776730232801 1.1617291449430582 1.0960444428356177 1.0496500928099943 1.4209960444172727 1.2943967870067628 1.1662671033325096 1.0901954398903304 1.275868244423271 1.12231564431017 1.2134075890891625 1.0 11.050377030405247 -9.70082688828654 0.7151163664959169 1.0105324999956824 1.1953672490535328 0.0 0.11851055434434624 0.5462529249716439 0.5939343296861701 0.04488448938068892 0.02403193587195952 1.9914669884058515e-10 9.70082688828654 0.18483474905785036 LREQYGLGPYEAVT(ph)PLTK ddPTM_A549_MK2206_60min_R1 2 LREQYGLGPYEAVTPLTK 18 1 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LREQYGLGPYEAVT(1)PLTK;LREQYGLGPYEAVT(0.999)PLT(0.001)K 106.63 1.8203e-09 13886900.0 4560.700000000001 4657.6 4136.9 4050.5 4748.8 3802.8 3356.1 4741.4 6113.6 5850.0 7715.099999999999 True False 5330.434661590406 4894.651945781926 4723.5746260990945 5042.872681833857 4050.2578106973206 4205.209771905657 3965.85992793795 5413.507969928513 4728.87936141308 4528.4809369985505 5799.227744072279 0.9191628431973459 0.8440178868272639 0.814517869371026 0.8695765892257749 0.6984133042261221 0.7251327172318834 0.6838600073935157 0.9334877347181214 0.8154326007021774 0.7808765471622267 1.0 12.501645080768565 -10.501015144873431 0.6287721969527934 1.0137977918306174 0.8038305462529305 0.0 0.10083648704267295 0.6886749399196259 0.4436980735066683 0.07741864813598126 0.01729650627170847 3.154894602836585e-11 10.501015144873431 -0.20996724557768687 LREQYGLGPYEAVT(ph)PLTK ddPTM_A549_PD325901_60min_R1 1 LREQYGLGPYEAVTPLTK 18 1 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LREQYGLGPYEAVT(0.999)PLT(0.001)K 89.62200000000001 2.4986e-06 6679400.0 4500.2 4276.9 5105.6 4570.7 5354.8 5503.2 5279.0 5504.2 5262.7 5465.5 6577.5 True False 4957.056991127857 4637.329372781857 5452.096718466907 4853.021758187139 4978.69732105714 5458.383763780145 5479.89523377964 5394.414413038634 5041.527020532227 5120.407397251934 5768.50919820786 0.8593306902705291 0.8039043041177028 0.9451483097505929 0.8412956608780062 0.8630821499953408 0.9462382005867195 0.9499673217964382 0.9351487928136704 0.8739739935057242 0.8876483024145516 1.0 12.493982804529526 -14.999999999999998 0.15945491561536618 1.404050082612015 0.855335343996461 0.09187640700569633 0.05331669054399083 39.579739986617895 0.4075090791531687 5.088763087056111 0.07395712137103913 1.000000000000004e-15 14.999999999999998 -0.548714738615554 LRES(ph)PGSEQTPFMTAPEGK ddPTM_A549_PD325901_60min_R1 1 LRESPGSEQTPFMTAPEGK 19 1 H3BPE1;H3BQK9;Q9UPN3;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 LRES(0.936)PGS(0.064)EQT(0.001)PFMTAPEGK 76.889 9.0109e-05 5275700.0 2038.6 2270.8 1845.3 2252.4 2804.7 2221.2 2181.2 2614.8 2338.0 2620.6 2464.7 True False 2245.557171261998 2462.1682853732937 1970.5331546903367 2391.525632428451 2607.707547689728 2203.111283636513 2264.206759598438 2562.645762729081 2239.741990614009 2455.1348687656064 2161.557525020586 1.0388607035755903 1.1390713672308326 0.9116265155476581 1.106390001073728 1.2064021047345908 1.0192239892461483 1.0474885509127843 1.1855551994641804 1.0361704302052652 1.1358175021237171 1.0 11.077855515509647 -8.982463638713053 20.104820920675586 1.015956698101509 1.0817431435834137 0.0 0.08564865532104256 19.37801006629333 22218.45184212288 0.01339775116921776 0.01362506433536391 1.041205278841582e-09 8.982463638713053 0.06578644548190482 LREVIEIEDAS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 LREVIEIEDASPTK 14 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LREVIEIEDAS(0.987)PT(0.013)K;LREVIEIEDAS(0.983)PT(0.017)K 112.82 1.7588999999999998e-06 11034700.0 2282.9 1984.33 1613.8899999999999 2001.54 3711.7 2639.4 2396.6000000000004 3045.5 4114.0 2758.8 2529.5 True False 2668.1977084536866 2085.323921241293 1842.763869882055 2491.917389852545 3165.7138468592566 2918.699556108078 2832.031197907125 3477.208951452588 3182.185568708029 2135.5851639301877 1901.3553393515074 1.4033135486203883 1.0967565494372724 0.9691843664059995 1.3106005691195313 1.6649774933385058 1.5350626448939075 1.4894802351216694 1.8288054207892328 1.6736406408879745 1.1231909784199354 1.0 10.892812463368015 -6.515424619405041 24.547270175532546 1.4168413945353737 1.1486920420345532 0.2217863292910789 0.24794136555424356 445.4161063135298 1466801.7467982492 0.04501223897373456 0.09700638809145022 3.0519357083672644e-07 6.515424619405041 -0.2681493525008205 LREVIEIEDAS(ph)PTKCPITTK ddPTM_A549_MK2206_60min_R1 2 LREVIEIEDASPTKCPITTK 20 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LREVIEIEDAS(0.949)PT(0.05)KCPITTK;LREVIEIEDAS(0.955)PT(0.045)KCPITTK 54.235 0.0030914000000000002 7092600.0 3286.6099999999997 3812.5 3866.7999999999997 3311.1000000000004 4718.6 3458.4 3717.2 2776.5 5888.700000000001 4838.4 5252.4 True False 3841.3094181002107 4006.539965495877 4415.170384635833 4122.31964864093 4024.500190691624 3824.3655924998748 4392.5671237838405 3170.077377674636 4554.918852321579 3745.4020795852607 3948.084121134559 0.972955312055594 1.0148061293953685 1.1183070697508461 1.0441316654256851 1.0193552283113727 0.9686636543602491 1.1125819483607027 0.8029406872829377 1.1537035971291902 0.9486631907196917 1.0 11.946937014033587 LREVIEIEDAS(ph)PTKCPITTK ddPTM_A549_PD325901_60min_R1 4 LREVIEIEDASPTKCPITTK 20 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LREVIEIEDAS(0.994)PT(0.006)KCPITTK;LREVIEIEDAS(0.974)PT(0.026)KCPITTK;LREVIEIEDAS(0.745)PT(0.248)KCPIT(0.003)T(0.004)K;LREVIEIEDAS(0.987)PT(0.013)KCPITTK 174.4 3.1414e-35 87792300.0 13916.5 16418.1 17328.0 17212.4 18684.399999999998 21440.4 17986.199999999997 22474.799999999996 17935.5 19830.6 20638.8 True False 15329.29283521418 17801.71090632696 18503.982281728786 18275.570855803344 17372.07220168073 21265.796490941953 18670.674683426296 22026.522482860488 17181.733307381346 18578.492531688622 18100.35844013263 0.8469054845469599 0.9835004629994785 1.0222992181580908 1.0096800522625136 0.9597639880524619 1.174882616898394 1.0315085607381755 1.2169108449268415 0.9492482352882868 1.0264157250331496 1.0 14.143730646729837 -5.265030512162482 2.9718324031072796 1.0120184258688978 0.8200928558872335 0.2643725211057787 0.08314617849325674 0.4473830741151202 5.709565313994743 0.012026380644372489 0.20249333103815806 5.432121657758347e-06 5.265030512162482 -0.19192556998166432 LREVMESAVGNSSGSGQNEES(ph)PR ddPTM_A549_MK2206_60min_R1 2 LREVMESAVGNSSGSGQNEESPR 23 1 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 LREVMESAVGNS(0.006)S(0.006)GS(0.005)GQNEES(0.984)PR;LREVMESAVGNS(0.002)S(0.012)GS(0.032)GQNEES(0.954)PR 58.565 0.00061954 4868300.0 1992.17 3234.6 2098.2 1968.3899999999999 3151.8999999999996 2506.8999999999996 2340.8 2155.6 3359.9 3770.1 3443.9 True False 2328.3995921197525 3399.227323906351 2395.756310396946 2450.6456383643845 2688.259685296682 2772.178494054457 2766.0930601940236 2461.162901248136 2598.888014657782 2918.431791551832 2588.6845831953597 0.8994527982415212 1.3131098883087922 0.9254724681211369 0.9466760277682861 1.0384655213492295 1.0708830701315495 1.0685322878462384 0.9507388104464175 1.0039415506735192 1.1273802187014403 1.0 11.338003476249508 -8.243337569829501 24.4244151198237 0.9980791050491346 1.0416301184560441 0.0 0.1116048037172895 1768.0247525668099 2385563.163213534 0.015589855964801783 0.02010319433617696 5.710346084858966e-09 8.243337569829501 0.04355101340690959 LREVMESAVGNSSGSGQNEES(ph)PR ddPTM_A549_PD325901_60min_R1 1 LREVMESAVGNSSGSGQNEESPR 23 1 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 LREVMESAVGNSSGS(0.001)GQNEES(0.999)PR 65.093 0.00015126 2564900.0 514.54 859.88 688.99 575.77 523.37 659.07 674.07 787.75 837.9 803.13 850.64 True False 566.7757220156718 932.3451053491219 735.7490046334441 611.3340052314549 486.6102967284817 653.7027524339621 699.7221027152574 772.0377082720798 802.6859768757392 752.4202347369768 746.0166726512404 0.7597359989307331 1.249764434936415 0.9862366775513121 0.8194642662058184 0.6522780449385077 0.8762575642053585 0.9379443226497091 1.0348799652538117 1.0759625170615879 1.00858367154581 1.0 9.543064063261237 -8.155228498434935 3.429267545449928 1.0369945284216378 0.8978497967881324 0.1717005087903758 0.14190370941956248 0.3581919027933161 7.915460783472057 0.024092946593687076 0.03150996090923891 6.994738800192269e-09 8.155228498434935 -0.13914473163350538 LRGT(ph)ADVTHDLQEMKEESR ddPTM_A549_MK2206_60min_R1 1 LRGTADVTHDLQEMKEESR 19 2 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 LRGT(0.992)ADVT(0.008)HDLQEMKEESR 58.974 0.0014740999999999999 2390200.0 332.51 380.31 446.57 288.72 494.33 567.67 594.95 449.74 848.84 805.37 629.34 True False 388.62955891100586 399.66615456465246 509.90034102276417 359.4564129611334 421.6147118349912 627.7404626111507 703.0447138424615 513.4920222709857 656.5790953189411 623.4363576462431 473.057509099616 0.8215270901220777 0.8448574367318438 1.0778823530214585 0.7598577467786045 0.8912546650775349 1.3269855155791677 1.4861717662628098 1.0854748363435343 1.3879477287415372 1.3178870341427356 1.0 8.885871770906935 -7.246959379385362 23.355093033350798 1.2135542057470303 0.8815963420127386 0.6127619877533627 0.15042213484633082 245.60509558524953 396140.5746852978 0.026647090495295043 0.04599087376156 5.6629225324713494e-08 7.246959379385362 -0.3319578637342917 LRGT(ph)PER ddPTM_A549_MK2206_60min_R1 2 LRGTPER 7 1 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LRGT(1)PER;LRGT(1)PER 65.157 0.0099931 22734600.0 1198.91 1445.26 883.05 977.9 1830.65 1433.9 1148.1299999999999 1625.24 2215.19 1912.6299999999999 1623.38 True False 1401.256697464721 1518.8175607954288 1008.2797683233354 1217.4855438995999 1561.3638100473918 1585.6343462542145 1356.7303593645602 1855.6227470887534 1713.4530019315366 1480.5655546207752 1220.2499429912834 1.148335802442017 1.2446774281933142 0.8262895434780101 0.9977345632281637 1.2795442597767406 1.2994340670627191 1.1118462796553898 1.5206907058237074 1.4041819971171072 1.2133297470117983 1.0 10.252960968992582 -6.761838803451826 24.999998865690443 1.2277267903476283 1.0515770597771288 0.2582790362091566 0.16253387465894012 16.355918600981084 1023823.9277735178 0.028931290548512803 0.057169713346190885 1.7304585321934227e-07 6.761838803451826 -0.17614973057049954 LRGT(ph)PER ddPTM_A549_PD325901_60min_R1 2 LRGTPER 7 1 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LRGT(1)PER;LRGT(1)PER 55.083999999999996 0.016194 25801000.0 2250.08 2245.56 1971.3400000000001 1894.87 2319.56 2031.1299999999999 1838.2199999999998 1713.5500000000002 2191.91 2484.94 2500.3 True False 2478.506465178652 2434.801221993506 2105.126987030427 2011.9118163379935 2156.6421076475854 2014.589150699004 1908.17446801258 1679.371900996031 2099.7916452723507 2328.0404643174866 2192.7789507075813 1.130303838596622 1.1103723980968656 0.9600269951292307 0.9175169324243904 0.9835200702522545 0.9187379101978894 0.8702083114200074 0.7658646579282966 0.9575938534957092 1.0616849744778232 1.0 11.098544669044058 -5.7561146383197 4.683463214184288 0.9485926610629946 1.1251952841693278 0.4814542206083853 0.07271137140544279 0.1233445259822445 6.827598968068961 0.01023758746115575 0.03876768511457988 1.753417600773947e-06 5.7561146383197 0.17660262310633323 LRGT(ph)PERIELENYR ddPTM_A549_MK2206_60min_R1 2 LRGTPERIELENYR 14 2 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LRGT(1)PERIELENYR;LRGT(1)PERIELENYR 107.15 6.1651e-06 16489400.0 1094.01 1011.04 824.0 700.71 955.3700000000001 716.31 539.08 877.9 1093.81 1335.8 1349.33 True False 1278.6521420234872 1062.4976174990031 940.8555903951403 872.3839814560674 814.8363385709862 792.1094487519041 637.023858035455 1002.3450134559924 846.0637814556468 1034.0418522466082 1014.2541213865074 1.2606822245647293 1.0475654918183086 0.9276329970530169 0.8601236741966595 0.803384794194464 0.7809773034681616 0.6280712541395735 0.9882582602531257 0.8341733729403625 1.0195096381102702 1.0 9.986203449559534 -5.387769957031273 1.6892791971298016 0.8822977618806259 1.3373895166013374 0.54537822746904 0.10802904771690298 0.4725023346511169 1.5734873506937126 0.016388578995118034 0.31937432111921815 4.094774998699258e-06 5.387769957031273 0.4550917547207115 LRGT(ph)PERIELENYR ddPTM_A549_PD325901_60min_R1 2 LRGTPERIELENYR 14 2 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LRGT(1)PERIELENYR;LRGT(1)PERIELENYR 113.53 1.6771e-06 37122000.0 1328.8 1047.73 939.11 1376.9699999999998 1337.6799999999998 1633.77 1267.39 1193.19 1445.0300000000002 1599.25 1539.83 True False 1463.6987977891413 1136.0258841087546 1002.8436519271884 1462.0223095742324 1243.7259715454757 1620.465118794717 1315.6212199924184 1169.390889410553 1384.3004143271867 1498.273082070288 1350.440671786607 1.0838675318129274 0.8412260589025463 0.7426047459015327 1.0826260939253296 0.92097786857978 1.1999528395800407 0.9742162299154371 0.8659328127784179 1.0250731063185352 1.1094697555932624 1.0 10.399214544724172 -6.282936242959253 24.988545583086953 1.009705591442303 0.8844320668678246 0.20641935926128896 0.11415844343774564 864.004174751659 1004340.640347853 0.014474680830524165 0.03366621716372163 5.212712312385538e-07 6.282936242959253 -0.12527352457447838 LRLDT(ph)GPQSLSGK ddPTM_A549_PD325901_60min_R1 1 LRLDTGPQSLSGK 13 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LRLDT(0.999)GPQS(0.001)LSGK 58.98 0.0040902 4185000.0 1394.4 1322.5 1482.5 1550.0 1754.0 1458.9 1668.7 1776.4 1837.8 1375.4 1518.5 True False 1535.9584614969751 1433.9517163141534 1583.1113649967062 1645.739979694592 1630.8050909715048 1447.019202096753 1732.2032916476765 1740.96830844116 1760.563657121655 1288.5570092727673 1331.7341265645964 1.1533521825855777 1.0767552529522106 1.1887593277199964 1.2357871942052125 1.2245725767938422 1.0865676363115746 1.3007125499713288 1.3072942066388604 1.3220083663871312 0.9675782752498723 1.0 10.379090369643734 -4.959252289511616 16.40726665563537 1.1762319465794828 1.0466970546503114 6.480715588041974e-05 0.11774140971731237 33979953.14641733 365674879.208754 0.018048924792335445 133259086.40718848 1.0983675924854766e-05 4.959252289511616 -0.12953489192917145 LRLDTGS(ph)PEPETR ddPTM_A549_MK2206_60min_R1 2 LRLDTGSPEPETR 13 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LRLDT(0.117)GS(0.883)PEPETR;LRLDT(0.009)GS(0.991)PEPETR 168.0 1.1867e-21 17399500.0 6807.6 11211.6 6387.9 6455.700000000001 7862.700000000001 5848.7 5797.5 5921.1 13516.1 9121.0 13355.8 True False 7956.556450159589 11782.22255138454 7293.800274132418 8037.346789807388 6706.1072456557085 6467.605551947153 6850.830705944481 6760.434057608244 10454.724930776514 7060.559765190384 10039.186258672014 0.7925499383265835 1.1736232646552267 0.726533016342028 0.8005974371542908 0.6679931094876204 0.6442360352025871 0.6824089651715168 0.6734045851344246 1.041391668746613 0.7033000069195205 1.0 13.293354713762781 -8.772715863086926 24.987269590401187 1.0195460896074109 0.7726476958987856 0.039599149025009495 0.16798012130246356 164.04379305685725 363499.2479483565 0.02517583250089314 0.026918265033796875 1.687656812764851e-09 8.772715863086926 -0.24689839370862532 LRLDTGS(ph)PEPETR ddPTM_A549_PD325901_60min_R1 4 LRLDTGSPEPETR 13 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LRLDT(0.417)GS(0.583)PEPETR;LRLDT(0.005)GS(0.995)PEPETR;LRLDT(0.02)GS(0.98)PEPETR;LRLDT(0.01)GS(0.99)PEPETR 182.09 1.2349e-25 196075000.0 16776.7 19827.6 18204.7 19113.8 22578.4 24189.1 19925.4 21468.6 24059.699999999997 23343.6 24404.5 True False 18479.85823364621 21498.541436968262 19440.180415754177 20294.41601541063 20992.571075251442 23992.111989470548 20683.672000597246 21040.39193120912 23048.55447886051 21869.68111215629 21402.90121287171 0.8634277217769158 1.0044685635440411 0.9082965072072962 0.9482086476764916 0.9808282936252821 1.120974757153095 0.9663957140613292 0.9830626101547122 1.0768892613959786 1.02180918813959 1.0 14.385518750088405 -6.945122930457651 3.9929603174737953 1.0328013380171523 0.9354573697918588 0.43437976380089716 0.051277307783992664 0.1615585986683816 5.36006398010813 0.0075578803593852216 0.014566041384277698 1.1346895874285229e-07 6.945122930457651 -0.09734396822529356 LRLEHEQASQPT(ph)PEK ddPTM_A549_MK2206_60min_R1 2 LRLEHEQASQPTPEK 15 1 E7EVB6;E9PEY4;O60941-6;O60941;O60941-7;O60941-3;O60941-5;O60941-4;K7ERH7;M0R021;Q9Y4J8-4;Q9Y4J8-15;Q9Y4J8-14;Q9Y4J8-2;Q9Y4J8-13;Q9Y4J8-3;M0QZ28;O60941-2;Q9Y4J8-5;Q9Y4J8-16;Q9Y4J8-11;Q9Y4J8-10;Q9Y4J8-6;Q9Y4J8-12;Q9Y4J8-8;Q9Y4J8 E7EVB6 DTNB;DTNA Dystrobrevin;Dystrobrevin beta;Dystrobrevin alpha 1 LRLEHEQASQPT(1)PEK;LRLEHEQAS(0.005)QPT(0.995)PEK 87.85 2.1645e-05 8895100.0 1635.9 2115.23 2094.2200000000003 1543.33 2520.7 1974.88 1568.49 2244.9700000000003 2859.2 3161.4 3117.5 True False 1911.9999260849738 2222.886172122189 2391.211886550133 1921.4459192827162 2149.9083691510978 2183.860490780753 1853.464330136587 2563.2013724322833 2211.5957652041816 2447.237544312343 2343.3387113770814 0.8159298170606212 0.9485978963817366 1.0204294731020418 0.8199608148638331 0.9174552354352936 0.9319440165341656 0.7909502459622596 1.093824533341148 0.9437798106038713 1.0443379492818623 1.0 11.194349784277778 -8.259745673320595 24.99912828451958 0.9817377530594421 0.8990073089308488 0.36565302591092785 0.07490043350554254 171.03308000973055 2524453.727329271 0.011333072141157557 0.014246750039528853 5.498627840882538e-09 8.259745673320595 -0.08273044412859332 LRLEHEQASQPT(ph)PEK ddPTM_A549_PD325901_60min_R1 1 LRLEHEQASQPTPEK 15 1 E7EVB6;E9PEY4;O60941-6;O60941;O60941-7;O60941-3;O60941-5;O60941-4;K7ERH7;M0R021;Q9Y4J8-4;Q9Y4J8-15;Q9Y4J8-14;Q9Y4J8-2;Q9Y4J8-13;Q9Y4J8-3;M0QZ28;O60941-2;Q9Y4J8-5;Q9Y4J8-16;Q9Y4J8-11;Q9Y4J8-10;Q9Y4J8-6;Q9Y4J8-12;Q9Y4J8-8;Q9Y4J8 E7EVB6 DTNB;DTNA Dystrobrevin;Dystrobrevin beta;Dystrobrevin alpha 1 LRLEHEQASQPT(1)PEK 106.94 2.4877e-06 11542000.0 1443.6 1320.7 1431.7 1311.7 1706.8 1200.0 1522.4 1204.8 1614.2 1642.1 1656.8 True False 1590.1532092778484 1432.0000239970527 1528.863771511491 1392.7207299131585 1586.9202561403458 1190.2275978587325 1580.3357650892463 1180.7693188526846 1546.3607875317084 1538.4175257574607 1453.0241033205284 1.094374969860407 0.9855308117219596 1.0521943634779696 0.958498022662142 1.0921499874047724 0.8191382339348402 1.0876184100991706 0.8126288587741438 1.0642361568523757 1.0587694465919641 1.0 10.504842919809423 -4.067275796136903 12.952019191220417 1.0098584166121334 1.005460955825105 0.0 0.09802769749498956 0.0 0.0 0.011350024991016356 0.0 8.564937612029124e-05 4.067275796136903 -0.004397460787028296 LRLES(ph)EGSPETLTNLR ddPTM_A549_MK2206_60min_R1 4 LRLESEGSPETLTNLR 16 1 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LRLES(0.999)EGS(0.001)PETLTNLR;LRLES(0.989)EGS(0.011)PETLTNLR;LRLES(1)EGSPETLTNLR;LRLES(0.997)EGS(0.003)PETLTNLR 236.27 1.0302999999999999e-65 116815500.0 9272.1 9726.19 8820.59 8876.2 13118.800000000001 9895.419999999998 9669.68 9671.220000000001 14271.900000000001 14554.599999999999 14123.6 True False 10837.003798919548 10221.211527083635 10071.482296217806 11050.869398467763 11189.041898369278 10942.54677635181 11426.535689634717 11042.14505186908 11039.33743754111 11266.705751391299 10616.320328470038 1.0207871902525114 0.9627828862391398 0.9486792018896485 1.0409321739126867 1.0539472766626454 1.0307287683291662 1.0763179082861607 1.0401103876130318 1.0398459255168344 1.0612627918900588 1.0 13.37399618676837 -6.272017142663556 24.881401401109795 1.0293650102738439 0.975953071523023 0.4970480078536287 0.026929240165145977 475.66760662354795 1118883.4127257576 0.0040895409638592554 0.009592832814276038 5.345432592529766e-07 6.272017142663556 -0.05341193875082084 LRLES(ph)EGSPETLTNLR ddPTM_A549_PD325901_60min_R1 4 LRLESEGSPETLTNLR 16 1 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LRLES(0.806)EGS(0.194)PETLTNLR;LRLES(0.997)EGS(0.003)PETLTNLR;LRLES(0.98)EGS(0.02)PETLTNLR;LRLES(0.999)EGS(0.001)PETLTNLR 215.62 5.4912e-47 72200000.0 5928.48 6416.31 6182.76 6455.42 6389.8099999999995 6540.6 6366.09 6719.82 6388.98 6745.5 8160.349999999999 True False 6530.334925283695 6957.034961741908 6602.359273556179 6854.156632077459 5941.011789247799 6487.335522129016 6608.35503860812 6585.787918503194 6120.4733888764285 6319.587978805767 7156.678682720718 0.9124812241537007 0.9721038585313554 0.9225451590410363 0.9577287085175871 0.8301353257051964 0.9064729338474029 0.9233829450193864 0.920229649879923 0.8552114270064783 0.8830336331941177 1.0 12.80507449231008 -11.038185913001735 1.3447742480385363 0.9998316142722651 0.9061242331315622 0.0 0.05119515324385733 0.34701068047508954 1.1218398575415558 0.02922868622715722 0.006601024892161718 9.158283579286868e-12 11.038185913001735 -0.09370738114070287 LRLES(ph)EGSPETLTNLRK ddPTM_A549_MK2206_60min_R1 3 LRLESEGSPETLTNLRK 17 2 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LRLES(1)EGSPETLTNLRK;LRLES(0.999)EGS(0.001)PETLTNLRK;LRLES(0.991)EGS(0.009)PETLTNLRK 171.07 1.6016999999999997e-30 40002000.0 5553.1 6079.8 5964.0 5369.4 8792.5 7018.1 7043.9 6305.58 10636.900000000001 9965.5 9673.3 True False 6490.327519739878 6389.235851074576 6809.7848799958965 6684.903241041522 7499.134897354323 7760.75068376225 8323.68545228156 7199.415275028862 8227.6591336389 7714.2866286596645 7271.1526405016575 0.8926132953924747 0.8787101807607995 0.9365481948575997 0.9193732509210962 1.0313543489078694 1.0673343096297334 1.1447546027182953 0.9901339761356123 1.1315481245448382 1.0609441185005068 1.0 12.827968366403184 -6.79078802989833 2.5331250326382304 1.0647503349757272 0.9017124643328737 0.7321061693387616 0.045256406305395104 0.13607212910498018 1.7826608753198367 0.008200584821013232 0.01771656783680839 1.6188699816092582e-07 6.79078802989833 -0.16303787064285358 LRLES(ph)EGSPETLTNLRK ddPTM_A549_PD325901_60min_R1 3 LRLESEGSPETLTNLRK 17 2 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LRLES(1)EGSPETLTNLRK;LRLES(1)EGSPETLTNLRK;LRLES(0.92)EGS(0.08)PETLTNLRK 203.71 3.4574e-49 61916000.0 9908.7 11898.3 12581.7 14899.199999999999 14543.1 17601.9 14477.0 15963.199999999999 18381.4 14843.5 15781.7 True False 10914.62392960059 12901.011498087477 13435.569821908306 15819.489745461713 13521.642826971327 17458.55596229135 15027.930157118379 15644.801453111859 17608.893681040376 13906.27887679244 13840.65094843892 0.7885918061412888 0.9321101692505709 0.970732509038796 1.1429729572976468 0.9769513643067796 1.2613970273024255 1.0857820353321872 1.1303515644888384 1.2722590683515844 1.0047416793182635 1.0 13.756624176425834 -5.492642997507257 0.8272893980608331 1.1330041894900358 0.6700822969796466 0.5297446728261759 0.09448940913539727 1.1341535488284575 0.6921995363703723 0.017159885923711406 0.4427267381967428 3.2163033456541396e-06 5.492642997507257 -0.4629218925103892 LRLESEGS(ph)PETLTNLRK ddPTM_A549_MK2206_60min_R1 1 LRLESEGSPETLTNLRK 17 2 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LRLES(0.32)EGS(0.664)PET(0.016)LTNLRK 59.163000000000004 0.0016308 7940700.0 2985.4 3905.4 3686.4 3173.6 4819.4 2948.7 2891.2 2886.1 5314.9 5553.5 4907.9 True False 3489.262533977677 4104.1681786878935 4209.186951981366 3951.1321424683156 4110.472644220575 3260.7294768113534 3416.4936157010243 3295.213513310558 4111.083636151265 4298.960492926743 3689.1329788508688 0.9458218378087716 1.1125020979770441 1.1409691589085762 1.0710191703902896 1.1142110267602632 0.883874204455227 0.9260966290147749 0.8932216681267442 1.1143766461440567 1.1653037495725704 1.0 11.849066078159705 -5.218147939387707 21.152401325195207 1.0392789500848074 0.9458195870411756 0.07456455367382853 0.09708625167178901 7655.059296899382 3739691.8087007776 0.013162406941242034 5.113987124204772 6.051347047220657e-06 5.218147939387707 -0.09345936304363178 LRLESEGS(ph)PETLTNLRK ddPTM_A549_PD325901_60min_R1 1 LRLESEGSPETLTNLRK 17 2 H3BPZ1;H3BS72;Q9P035;H3BMZ1;H3BRL8;Q9P035-2 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 LRLES(0.04)EGS(0.96)PETLTNLRK 110.67 1.7831e-09 17533000.0 5257.2 4884.7 5661.8 5140.1 6287.8 5712.5 5951.5 7209.4 6537.1 7116.6 7043.4 True False 5790.9070738539085 5296.350811856142 6046.04379516921 5457.592302985918 5846.166619732401 5665.979293973336 6177.987589285766 7065.602861335114 6262.3684203776065 6667.256661473445 6177.106451791296 0.9374789181712427 0.8574161467332744 0.9787825161109083 0.8835192246692256 0.9464247808190311 0.9172545977947751 1.00014264567097 1.1438369917174023 1.0138028977243196 1.0793494840193356 1.0 12.59271547793202 -7.8091867067450496 5.034085840007433 1.0192741475459415 0.9192841416165827 0.5794846922359658 0.05166595413815153 0.12675932683036645 7.0384586711289066 0.0075673307099939245 0.010670398637295846 1.5517197695390696e-08 7.8091867067450496 -0.0999900059293588 LRLS(ph)NRPAFMPSEGR ddPTM_A549_PD325901_60min_R1 1 LRLSNRPAFMPSEGR 15 2 P12814-4;P12814-3;P12814;P12814-2;H9KV75 P12814-4 ACTN1 Alpha-actinin-1 1 LRLS(1)NRPAFMPSEGR 46.663000000000004 0.011701000000000001 3168300.0 484.51 451.53 415.97 355.08 668.41 385.45 394.91 453.17 428.83 598.52 527.12 True False 533.6970985225896 489.58201774467307 444.20022563081284 377.0124851548099 621.463187489318 382.31102299554004 409.93851615304413 444.1311688450122 410.80776639649554 560.7293450559376 462.2875816889894 1.1544699006897443 1.0590421139065906 0.9608742333244308 0.8155366920681214 1.3443216130071525 0.826998254200878 0.886760822463183 0.9607248527471971 0.8886411460493705 1.2129448578464657 1.0 8.852646798127633 LRLS(ph)PS(ph)PTSQR ddPTM_A549_MK2206_60min_R1 3 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(0.992)PS(0.875)PT(0.131)S(0.002)QR;LRLS(0.94)PS(0.831)PT(0.125)S(0.104)QR;LRLS(0.998)PS(0.94)PT(0.061)S(0.001)QR 108.01 0.00022498 946500000.0 31083.9 34696.0 31862.6 27346.600000000002 52333.2 38121.2 38491.2 39388.0 61384.2 47066.6 50240.7 True False 36330.102391608736 36461.87820140194 36381.19579432549 34046.51822763552 44635.05560537083 42155.16008119545 45484.55280183706 44971.369620691 47480.77671042473 36434.22237082663 37764.54761721972 0.9620160887361745 0.9655054939616489 0.9633690349765117 0.9015470957769696 1.1819301016866497 1.1162628110491044 1.2044246700070942 1.1908356503173136 1.2572844031309047 0.9647731713914006 1.0 15.204744884444297 -6.762521662389582 24.999227478509553 1.1389038908126397 0.9504419632612852 0.5266882183234085 0.08306745487798582 20.06304757508923 463447.6862249841 0.014068077850176537 0.02770104453440591 1.7277397995692866e-07 6.762521662389582 -0.1884619275513545 LRLS(ph)PS(ph)PTSQR ddPTM_A549_PD325901_60min_R1 4 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(1)PS(0.671)PT(0.32)S(0.009)QR;LRLS(0.997)PS(0.913)PT(0.049)S(0.042)QR;LRLS(0.998)PS(0.583)PT(0.382)S(0.037)QR;LRLS(0.901)PS(0.748)PT(0.054)S(0.296)QR 111.88 1.6625e-05 1781595000.0 12994.499999999998 16593.7 15569.5 14934.199999999999 16575.4 15520.4 13490.2 16257.7 16734.2 20329.8 18195.2 True False 14313.692073954691 17992.109334595207 16626.139897009267 15856.651615970952 15411.20108602571 15394.007008172228 14003.57694312069 15933.427419581076 16030.919768748066 19046.172958494615 15957.305748875966 0.8969992992058167 1.1275154852417724 1.0419139771248924 0.993692285246079 0.9657771386069529 0.9646996335366065 0.8775652458816303 0.998503611469839 1.0046131860246699 1.1935707229170707 1.0 13.96192946526644 -4.925835612509546 12.796982406335253 0.9978604587618151 5.929050128368423e-05 0.11375684046839518 0.08186548509304623 829758.9570771761 3988092.3580462094 0.007673881972719778 21319362.806220002 1.1862176657859329e-05 4.925835612509546 -0.9978011682605313 LRLS(ph)PSPT(ph)SQR ddPTM_A549_MK2206_60min_R1 1 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(0.882)PS(0.42)PT(0.52)S(0.179)QR 90.96600000000001 0.00015842 365870000.0 2389.5 2583.0 2417.7 1811.5 3294.1 2919.3 2520.9 2745.7 3924.4 3775.4 3553.9 True False 2792.7891823339123 2714.4636671149756 2760.56621468244 2255.317581321326 2809.5422536678834 3228.218388325493 2978.914898941861 3134.911383353592 3035.529665979046 2922.534517870825 2671.3685473498026 1.0454525958631085 1.016132225487167 1.0333902513829956 0.8442554972651639 1.0517239399464966 1.2084511482057116 1.1151268895103101 1.1735226075277627 1.1363200592409903 1.0940214598132474 1.0 11.38336331146061 -6.9903420058768715 24.99868439158274 1.0898777564423663 0.9851995992872582 0.39893762771208785 0.0730631904228344 233.7491422617199 605030.3137446626 0.012403815760748156 0.023421919015960954 1.0224874686862396e-07 6.9903420058768715 -0.10467815715510809 LRLS(ph)PSPT(ph)SQR ddPTM_A549_PD325901_60min_R1 2 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(0.98)PS(0.241)PT(0.763)S(0.016)QR;LRLS(0.988)PS(0.254)PT(0.747)S(0.01)QR 119.21 2.962e-05 1405030000.0 37589.0 38399.0 38569.0 38706.0 43209.0 38044.0 37942.0 42276.0 39768.0 40642.0 45679.0 True False 41405.00760844075 41635.01849130222 41186.52427423809 41096.78171229605 40174.148902957684 37734.18227744801 39385.903572659045 41432.772015119575 38096.68925694523 38075.857183992906 40060.77258303865 1.0335548951936897 1.039296444046366 1.028101097872388 1.0258609373323977 1.0028301081733766 0.9419234788653154 0.9831538693124122 1.034247952388762 0.9509724051870885 0.9504523934247305 1.0 15.28990262373978 -6.88525025890276 3.34286230270518 0.9792358689550746 1.0324194936199014 0.5176072705951387 0.024615171823568552 0.16588804165077903 3.660959897422369 0.003823702319883173 0.007623648201025742 1.3024160547958564e-07 6.88525025890276 0.053183624664826734 LRLS(ph)PSPTSQR ddPTM_A549_MK2206_60min_R1 11 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LRLS(0.999)PS(0.001)PTSQR;LRLS(0.984)PS(0.016)PTSQR;LRLS(0.991)PS(0.009)PTSQR;LRLS(0.989)PS(0.01)PTSQR;LRLS(0.65)PS(0.35)PTSQR;LRLS(0.707)PS(0.29)PT(0.001)S(0.001)QR;LRLS(0.989)PS(0.011)PTSQR;LRLS(0.951)PS(0.049)PTSQR;LRLS(0.994)PS(0.006)PTSQR;LRLS(0.98)PS(0.02)PTSQR;LRLS(0.975)PS(0.025)PTSQR 181.76 4.4669e-19 5760548800.0 37327.39 42954.3 41603.5 37442.09999999999 53960.79999999999 42940.810000000005 38323.1 39544.399999999994 60836.3 60596.8 63014.4 True False 43627.34086493368 45140.49039735068 47503.501887141036 46615.41618083973 46023.237801439514 47484.77801239721 45285.91120775866 45149.93979964594 47056.97518560827 46907.94079369466 47366.18537103445 0.9210651126576225 0.9530108883320624 1.0028990410570524 0.9841496801079989 0.9716475464706478 1.0025037405996238 0.9560810281220593 0.9532103851296456 0.9934719213083334 0.9903254911969327 1.0 15.531569868908251 -5.534433361028732 3.4547304649986135 0.9893241295071455 0.9244110539704615 0.5312612177352771 0.01733877855408198 0.12816119989329444 3.0681164612987564 0.0026190162302602064 0.015324601833354306 2.921235965821868e-06 5.534433361028732 -0.06491307553668402 LRLS(ph)PSPTSQR ddPTM_A549_PD325901_60min_R1 11 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LRLS(0.997)PS(0.003)PTSQR;LRLS(0.986)PS(0.014)PT(0.001)SQR;LRLS(0.991)PS(0.009)PTSQR;LRLS(0.997)PS(0.003)PTSQR;LRLS(0.962)PS(0.038)PTSQR;LRLS(0.972)PS(0.028)PTSQR;LRLS(1)PSPTSQR;LRLS(0.995)PS(0.004)PT(0.001)SQR;LRLS(0.993)PS(0.007)PTSQR;LRLS(0.972)PS(0.028)PTSQR;LRLS(0.996)PS(0.004)PTSQR 197.19 1.9613999999999998e-24 10740712800.0 43814.76 45692.93000000001 45957.189999999995 46455.299999999996 53059.19 49441.27 46081.509999999995 49394.04 51749.799999999996 50331.99 55042.30999999999 True False 48262.80218047848 49543.633570451806 49076.12127643373 49324.7383733588 49332.49553866844 49038.63668932082 47835.16707981982 48408.837123325255 49574.935870777124 47154.019561688816 48272.4548119511 0.9998000385207211 1.0263334185811075 1.0166485518006774 1.0217988408815535 1.0219595363618197 1.0158720305473263 0.9909412576212506 1.0028252615680193 1.0269818691404846 0.9768307774150033 1.0 15.55891257395113 -11.144190820932728 1.523235168417038 1.0000111867222063 1.0155823988107422 0.26965580373505493 0.013204117635205345 0.5490399039591171 2.285724342338054 0.00853392609165581 0.001830758516556709 7.174789750626511e-12 11.144190820932728 0.015571212088535846 LRLSPSPTSQR ddPTM_A549_PD325901_60min_R1 1 LRLSPSPTSQR 11 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 68.515 0.004097399999999999 2794600.0 1284.0 1460.6 1115.7 1005.6 1189.3 1035.7 999.81 1163.4 985.27 1172.1 1810.9 False True 1414.3507347691582 1583.6898879761466 1191.418111249123 1067.7136281166981 1105.7676708622641 1027.2656025852411 1037.8583166670242 1140.1950743303564 943.8625282687187 1098.0934059681629 1588.170780240914 0.8905533034392004 0.9971785828573879 0.7501826164239047 0.6722914445981267 0.6962523707271124 0.6468231347446226 0.6534928923132489 0.7179297645542863 0.5943079547940944 0.6914202298833316 1.0 10.633150342331257 -3.8474528513726662 20.02959282623661 0.7780265635522069 49.679209423683375 0.0 0.13691141300330845 0.0 0.0 0.022890285546280316 0.0 0.0001420846456873455 3.8474528513726662 48.901182860131165 LRLT(ph)PQHDQIQTQPLGK ddPTM_A549_MK2206_60min_R1 2 LRLTPQHDQIQTQPLGK 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 LRLT(1)PQHDQIQTQPLGK;LRLT(1)PQHDQIQTQPLGK 84.919 4.8085e-05 16707800.0 2758.7 2982.0 3347.0 2758.5 4567.1 3132.2 2701.7 2670.1000000000004 4741.4 4101.3 3649.2 True False 3224.30111626054 3133.7710628481855 3821.654928461816 3434.33262383377 3895.2856400007854 3463.6473250139093 3192.563918628756 3048.594851838302 3667.480470459953 3174.813481523442 2743.002927203606 1.1754639720882838 1.1424599776285889 1.3932376413312317 1.2520338894916712 1.4200807448542867 1.2627209729393087 1.1638937337494792 1.1114078011379436 1.3370311909214108 1.1574225641676772 1.0 11.421540446425336 -10.917542366644335 0.9887349139924244 0.9884583172990552 1.2578229767546527 0.23717051324866512 0.10594058624196025 0.4285422972781597 0.6889243055491541 0.08687157415612491 0.01724272704877462 1.209087227340923e-11 10.917542366644335 0.2693646594555975 LRLT(ph)PQHDQIQTQPLGK ddPTM_A549_PD325901_60min_R1 1 LRLTPQHDQIQTQPLGK 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 LRLT(1)PQHDQIQTQPLGK 69.398 0.00084536 10339000.0 1166.3 1233.9 1616.5 1448.9 1984.6 1783.9 1572.9 1726.8 1840.4 1753.4 1723.2 True False 1284.70191741532 1337.8850833724273 1726.2054108041664 1538.3952623093508 1845.2085424983184 1769.37250985016 1632.757570223905 1692.357619351607 1763.054388163398 1642.6900247628841 1511.25732426481 0.850088133098244 0.8852794702075478 1.1422312951528115 1.0179571920736548 1.2209757483861774 1.1707949939702802 1.0803967954419689 1.1198341885124679 1.1666142885501523 1.0869691073702574 1.0 10.56153361613312 -5.72451152438454 7.4931182403469245 1.0977514980852234 0.8649338636620325 0.6819935386493529 0.06370967280476525 0.11214184883919427 17.928594888211467 0.010622627734361682 0.04081049223750673 1.885768928295929e-06 5.72451152438454 -0.23281763442319092 LRNT(ph)PYQAPVR ddPTM_A549_MK2206_60min_R1 1 LRNTPYQAPVR 11 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 LRNT(1)PYQAPVR 98.58200000000001 0.00010921 8770000.0 1610.2 1757.7 1729.9 1505.1 2409.5 1836.9 1304.3 1989.9 2167.7 2463.8 2332.3 True False 1881.9623943896486 1847.1594222562883 1975.225832311352 1873.8495675665067 2055.065741845349 2031.279538764464 1541.2744268673375 2271.974418813169 1676.7194111055906 1907.2258688165846 1753.1255417946327 1.0734898040805045 1.0536378475014376 1.1266881836022766 1.068862168107078 1.1722296509020267 1.1586617674197432 0.8791580466562433 1.295956487227608 0.9564171938246778 1.0879003376245395 1.0 10.775713596241234 LRNT(ph)PYQAPVR ddPTM_A549_PD325901_60min_R1 2 LRNTPYQAPVR 11 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 LRNT(1)PYQAPVR;LRNT(0.999)PY(0.001)QAPVR 100.11 0.00010748 31086000.0 4616.5 5542.8 4857.9 4751.6 5246.299999999999 5010.9 4534.7 4538.200000000001 4620.5 5260.3 5575.4 True False 5085.163681512324 6009.911208458295 5187.586306925802 5045.095540333432 4877.81798675246 4970.092891758601 4707.270489983051 4447.682040850976 4426.316453221573 4928.1637602715855 4889.661145372573 1.0399828393680755 1.2291058684395528 1.0609296130541022 1.0317883776277539 0.9975779183325779 1.016449349759573 0.9626987126578024 0.9096094613959348 0.9052399177825452 1.0078742910304634 1.0 12.255518774209868 -6.541822055881254 0.9768552937171732 0.9527969469370131 1.137069620399334 0.5570655029253613 0.05507421150004505 0.3130416772784307 0.5375941371414077 0.008952662153108993 0.03751449112942386 2.871957072193636e-07 6.541822055881254 0.1842726734623209 LRPAKS(ph)QDK ddPTM_A549_MK2206_60min_R1 1 LRPAKSQDK 9 2 A1X283 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 LRPAKS(1)QDK 56.225 0.0032914000000000003 6623800.0 1576.7 1884.1 1614.8 1462.7 2125.0 1534.0 1324.2 1475.9 2549.9 2292.8 2085.2 True False 1842.808413386013 1979.992642358238 1843.8029215656222 1821.0615656630985 1812.4153149704778 1696.326861813211 1564.7899992775654 1685.1133447541863 1972.3517213535752 1774.8548875812426 1567.3872914076958 1.1757198897095542 1.263244032417779 1.176354390311327 1.1618453050155675 1.1563289589663053 1.0822640142052655 0.998342916173706 1.0751097408993018 1.2583690911403105 1.1323652407486453 1.0 10.614145989269396 -6.54638863345954 1.500707514683207 1.1092327489160845 1.2149213172275783 0.31016170191354264 0.07060160788215522 0.5972271092154807 2.6312082694717227 0.015227029971117547 0.04612066985011823 2.8419168469503895e-07 6.54638863345954 0.10568856831149387 LRPAKS(ph)QDK ddPTM_A549_PD325901_60min_R1 2 LRPAKSQDK 9 2 A1X283 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 LRPAKS(1)QDK;LRPAKS(1)QDK 54.143 0.006691 18041700.0 6097.5 6485.5 5570.4 5896.8 8181.6 8449.9 7349.5 7160.1 7400.9 8210.9 8177.1 True False 6716.513711257747 7032.055845864229 5948.440841536362 6261.031943395529 7606.952640987724 8381.086815955417 7629.189244300719 7017.286188510211 7089.865910323022 7692.462372719037 7171.368538907715 0.9365734970693267 0.9805737646465028 0.8294708059226839 0.8730595714648851 1.0607393274682204 1.168687227616942 1.0638400750023 0.9785142334323578 0.9886349964943919 1.072663095054196 1.0 12.808032744718123 -6.757327150713852 24.998144420102214 1.0158041174965324 0.9049340979556013 0.489033924127957 0.06518812262475777 89.53349007805535 544264.0516806733 0.010030653554640338 0.020293898634322235 1.748529038838472e-07 6.757327150713852 -0.11087001954093112 LRPISDDS(ph)ESIEESDTR ddPTM_A549_MK2206_60min_R1 1 LRPISDDSESIEESDTR 17 1 Q09GN1;Q71F23-3;Q71F23;D6R9S4 Q09GN1 MLF1IP;CENPU Centromere protein U 1 LRPIS(0.008)DDS(0.645)ES(0.347)IEESDTR 82.037 5.7093000000000004e-05 3842900.0 1054.1 1121.6 944.27 886.64 1585.0 1207.2 1134.3 1155.6 1828.6 1250.9 1745.7 True False 1232.0063097293048 1178.6846492590614 1078.1816848815768 1103.866839802782 1351.8485996368036 1334.9451027254945 1340.387627382979 1319.409838876575 1414.425019674163 968.3208212122198 1312.1945111310254 0.9388900039426292 0.898254518869396 0.8216630047874953 0.8412372025937841 1.030219672593813 1.0173378195088316 1.021485470342086 1.005498672402867 1.0779080446351064 0.7379400027954628 1.0 10.357765876145862 -6.768864306276311 24.99926111819741 1.0321210047548999 0.8728608326496982 0.12681343039923387 0.09503141257279357 56.52601642083409 190320.15357913735 0.005850524207561932 0.01121423670777213 1.7026904246934802e-07 6.768864306276311 -0.1592601721052017 LRPISDDSES(ph)IEESDTR ddPTM_A549_MK2206_60min_R1 1 LRPISDDSESIEESDTR 17 1 Q09GN1;Q71F23-3;Q71F23;D6R9S4 Q09GN1 MLF1IP;CENPU Centromere protein U 1 LRPISDDS(0.001)ES(0.998)IEES(0.001)DTR 107.39 2.6219000000000002e-09 6051800.0 948.34 1283.1 1266.6 989.04 1373.1 1217.0 1058.1 1172.2 1418.7 1618.2 1780.0 True False 1108.3966073130534 1348.4043094367898 1446.222925721461 1231.3548443996929 1171.1188089345717 1345.7821322207817 1250.3430737317553 1338.3629397119423 1097.3667151983673 1252.6474961112915 1337.9768744991839 0.8284123802423234 1.0077934343532724 1.0809027818681805 0.9203110067657929 0.875290770158439 1.0058336267766357 0.9345027537936853 1.000288544010077 0.8201686711581775 0.93622507233555 1.0 10.385837465414506 LRPKS(ph)PPPK ddPTM_A549_MK2206_60min_R1 4 LRPKSPPPK 9 2 Q9HCE5 Q9HCE5 METTL14 N6-adenosine-methyltransferase subunit METTL14 1 LRPKS(1)PPPK;LRPKS(1)PPPK;LRPKS(1)PPPK;LRPKS(1)PPPK 93.258 0.00020165 500233000.0 33193.5 36503.5 33338.7 29662.0 43459.1 34325.600000000006 33423.5 32202.6 48234.3 51138.9 49324.2 True False 38795.75129684063 38361.37223094525 38066.62897027485 36929.19133157779 37066.32395992167 37957.91220851079 39496.117309208355 36767.417166326406 37309.30806434946 39586.586972491474 37075.63986133294 1.0463946527137793 1.0346786292676564 1.0267288470987506 0.996050006680859 0.9997487325519907 1.023796550793935 1.0652848462475166 0.9916866520400102 1.0063024725639387 1.0677249838586673 1.0 15.17818397086202 LRPKS(ph)PPPK ddPTM_A549_PD325901_60min_R1 4 LRPKSPPPK 9 2 Q9HCE5 Q9HCE5 METTL14 N6-adenosine-methyltransferase subunit METTL14 1 LRPKS(1)PPPK;LRPKS(1)PPPK;LRPKS(1)PPPK;LRPKS(1)PPPK 90.65299999999999 0.00021685 833230000.0 33944.8 34371.0 35392.6 33993.3 43120.8 37779.9 36585.700000000004 38657.0 40947.7 38793.6 39500.299999999996 True False 37390.85110715901 37267.56479503501 37794.55466899324 36092.98893661431 40092.14376668421 37472.23302028594 37977.98883396321 37885.95580917017 39226.81056846251 36344.165475442795 34642.01351303229 1.0793498216578148 1.0757909548477889 1.0910034041403214 1.0418848466483095 1.1573271787911978 1.081699047492979 1.096298539912408 1.0936418518201176 1.1323478802323492 1.0491354800081167 1.0 15.08023516645138 -10.92047440502399 1.1528861002772601 0.9995404003771489 1.0969125462107996 0.39205769812614755 0.031617667784778244 0.26649956643048867 0.6243879239923869 0.020793784570768463 0.004819827392544411 1.2009518485581698e-11 10.92047440502399 0.09737214583365073 LRPLS(ph)YPQTVGETYGK ddPTM_A549_MK2206_60min_R1 2 LRPLSYPQTVGETYGK 16 1 P63000-2 P63000-2 RAC1 Ras-related C3 botulinum toxin substrate 1 1 LRPLS(1)YPQTVGETYGK;LRPLS(1)YPQTVGETYGK 142.43 8.4027e-15 17485600.0 7657.6 7422.2 7071.9 7397.9 10699.2 7961.3 6177.3 6737.5 10113.3 9115.7 9147.5 True False 8950.015669654802 7799.958277220584 8074.801759363341 9210.385832104352 9125.361853144534 8803.75948171677 7299.635449733654 7692.561257728391 7822.653697621512 7056.4570388714 6875.923291843415 1.3016456539402912 1.134387041006305 1.1743589066710647 1.3395125921532893 1.327147128585556 1.28037488320445 1.0616225836016624 1.1187677539762135 1.1376877497893496 1.0262559280209167 1.0 12.747337734787195 -9.04200827953411 0.4166273255810781 1.0047828513760424 1.2566019268111357 0.5649488068723885 0.07679536897321411 0.5741145150187276 0.25494133347924797 0.05087903839853745 0.037323266706529704 9.078032233513375e-10 9.04200827953411 0.2518190754350933 LRPLS(ph)YPQTVGETYGK ddPTM_A549_PD325901_60min_R1 2 LRPLSYPQTVGETYGK 16 1 P63000-2 P63000-2 RAC1 Ras-related C3 botulinum toxin substrate 1 1 LRPLS(0.996)YPQT(0.004)VGETYGK;LRPLS(0.986)YPQT(0.014)VGETYGK 163.42 3.2348e-21 28024000.0 12330.8 12738.3 12659.7 13519.3 16882.9 14485.1 15053.4 15391.2 16098.3 15606.599999999999 16567.6 True False 13582.613738544818 13811.801246067731 13518.863370960418 14354.356456441994 15697.103346843123 14367.138148119593 15626.265374536548 15084.21044183718 15421.744434346241 14621.196612560972 14529.890230669484 0.9348049794536529 0.9505784989974652 0.9304174468176639 0.987919125923128 1.0803318605745489 0.9887988085273792 1.0754565331507357 1.038150337157926 1.0613806566682964 1.0062840379687632 1.0 13.82673618339653 -6.504111665358327 4.78662810585911 1.0338915709407068 0.94159307615537 0.6919021363939278 0.028475141153331357 0.0902558430538367 5.443642287944137 0.004303943127829194 0.009811594400928988 3.1324802006185336e-07 6.504111665358327 -0.0922984947853368 LRPQSAQSSFPPS(ph)PGPSPDVQLATLAQR ddPTM_A549_PD325901_60min_R1 3 LRPQSAQSSFPPSPGPSPDVQLATLAQR 28 1 Q9Y679;Q9Y679-3 Q9Y679 AUP1 Ancient ubiquitous protein 1 1 LRPQSAQSSFPPS(1)PGPSPDVQLATLAQR;LRPQSAQSSFPPS(0.999)PGPSPDVQLATLAQR;LRPQSAQSSFPPS(0.999)PGPSPDVQLATLAQR 140.36 2.4728e-29 33017000.0 11233.9 11740.7 12213.0 11965.2 14840.9 15112.9 13567.8 13885.0 14950.8 13724.599999999999 14796.2 True False 12374.357258039921 12730.12999299024 13041.8476227351 12704.263229059186 13798.526382325555 14989.825553066032 14084.130053585031 13608.052782428218 14322.469868807504 12858.026413745105 12976.361200839701 0.9536076459739096 0.9810246336366216 1.0050465936391444 0.9790312578719751 1.0633586849780856 1.1551640187155117 1.08536821961103 1.0486801786580695 1.1037354499565484 0.9908807418918842 1.0 13.663598262617983 -6.761875512949389 24.988977644870644 1.06181084601798 0.9815858191266609 0.45698426580046125 0.04410105672570084 9.737383885538167 557985.7013906501 0.0072205692367742465 0.014265135401485452 1.7303122683534644e-07 6.761875512949389 -0.08022502689131916 LRPS(ph)LDFDK ddPTM_A549_MK2206_60min_R1 3 LRPSLDFDK 9 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 LRPS(1)LDFDK;LRPS(1)LDFDK;LRPS(1)LDFDK 84.169 0.00038334 11494600.0 1597.19 1367.3 1305.62 1092.3899999999999 2041.63 1852.21 1457.59 1990.61 2380.0 2368.8 1732.38 True False 1866.7566244536083 1436.8897297895103 1490.7765484608046 1360.0255990392495 1741.308931530907 2048.2096328025077 1722.4152356494376 2272.7850634874517 1840.9338000790262 1833.686434796951 1302.1822347443238 1.4335601996752287 1.1034474987071496 1.1448294322288235 1.0444203297753352 1.3372236888739335 1.572905525934058 1.322714432506157 1.7453663572162774 1.4137297768007742 1.4081642230029234 1.0 10.34671564619525 -3.8479527729076084 16.14887741535168 1.2622271418000974 1.2100543949388078 0.0 0.227242267512879 0.0 0.0 0.0335364708479532 0.0 0.0001419211844637056 3.8479527729076084 -0.05217274686128959 LRPS(ph)LDFDK ddPTM_A549_PD325901_60min_R1 4 LRPSLDFDK 9 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 LRPS(1)LDFDK;LRPS(1)LDFDK;LRPS(1)LDFDK;LRPS(1)LDFDK 98.156 0.00023492 22532300.0 7388.599999999999 6946.1 7468.9 6809.200000000001 8005.1 7267.599999999999 7250.0 7823.6 7204.0599999999995 7763.4 8653.7 True False 8138.685232800164 7531.472224340068 7975.784468144286 7229.78881918478 7442.849392095782 7208.4150751651 7525.90271735223 7667.552160504532 6901.29841099348 7273.217599089864 7589.349760324036 1.0723824161258149 0.9923738478510317 1.0509180259210706 0.9526229581592107 0.98069658497041 0.9498066768314718 0.9916399895939048 1.0103042293016098 0.9093398814049151 0.9583452902794305 1.0 12.889760568492305 -5.0423980580913605 0.5913217851238989 0.9617300225593349 1.1520170306896236 0.43048437654073235 0.033428411042349365 3.4283357407522432 0.6754335922592984 0.007010252757055057 0.47035388405877926 9.069888370155771e-06 5.0423980580913605 0.19028700813028865 LRPSTSVDEEDEES(ph)ERERDR ddPTM_A549_MK2206_60min_R1 1 LRPSTSVDEEDEESERERDR 20 3 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 LRPSTSVDEEDEES(1)ERERDR 48.983999999999995 0.0046504 6123400.0 987.89 600.54 691.62 919.69 778.35 419.85 506.08 756.35 1098.2 1160.6 1074.9 True False 1154.6216804083904 631.1049208862668 789.7021158119986 1145.0140912864535 663.8557460740107 464.2782483261254 598.0281851943739 863.5649287247292 849.4594534650358 898.4196539282933 807.9726642691982 1.4290355744308902 0.7810968722030884 0.977387170055159 1.4171445915464298 0.8216314430321234 0.5746212326948705 0.7401589331432189 1.068804635248166 1.0513467732641202 1.1119431308247332 1.0 9.658162673605275 -5.244208595527335 23.822050710942733 0.9791644497499055 1.4290362780580157 0.28114008243732214 0.21489236591188882 1917.235131630789 2650552.1111076144 0.029292013455675055 1.1037837303686302 5.698904830338037e-06 5.244208595527335 0.44987182830811023 LRPVHAHLYLQPGMEDGS(ph)DDMDTSVEDIGGR ddPTM_A549_MK2206_60min_R1 1 LRPVHAHLYLQPGMEDGSDDMDTSVEDIGGR 31 1 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;A0A0C4DG73 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34;Ubiquitin carboxyl-terminal hydrolase 1 LRPVHAHLY(0.001)LQPGMEDGS(0.865)DDMDT(0.119)S(0.015)VEDIGGR 79.762 2.2244e-06 2710600.0 517.94 760.58 773.06 641.66 938.21 812.18 588.93 600.48 1507.7 887.73 765.51 True False 605.3556095827687 799.2902733001584 882.691532416101 798.8667288052122 800.200551839272 898.1243485185483 695.9309577666032 685.5998788928746 1166.2083573021619 687.1911764447389 575.4127399988033 1.0520372030414684 1.38907295188115 1.5340145795484763 1.3883368811174976 1.3906549094497562 1.5608350077900885 1.2094465579056357 1.1914923518973535 2.026733640455349 1.1942578408086133 1.0 9.168453353378204 -5.278015555026468 3.6295799213953384 1.4510865142778393 1.0139522044133442 0.08193897759504265 0.26171070373944855 0.5070504044005938 12.14764301662606 0.049196538858855075 0.5831335174401815 5.272109780892213e-06 5.278015555026468 -0.4371343098644951 LRPVS(ph)PEEIR ddPTM_A549_PD325901_60min_R1 2 LRPVSPEEIR 10 1 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8;K7EMJ7 J3KNG6 SPIRE1 Protein spire homolog 1 1 LRPVS(1)PEEIR;LRPVS(1)PEEIR 105.65 8.7431e-05 14866600.0 1710.8400000000001 1493.97 1677.27 1456.73 2124.5 2056.88 1510.6599999999999 1789.95 2158.33 1636.0900000000001 1902.9 True False 1884.5232173461584 1619.8720949881715 1791.0996284438625 1546.7089036261304 1975.2824491271185 2040.1294512363918 1568.148992964871 1754.248043061389 2067.6228958947536 1532.7869981831345 1668.8553634769648 1.1292310038299915 0.9706485837174412 1.0732503652756393 0.9268082408313988 1.1836151246874567 1.2224722980102354 0.9396554232822922 1.051168412465963 1.2389467302828325 0.9184660526779627 1.0 10.704643209142938 -6.771432666926825 24.998209237880843 1.1097128980595155 1.0245509548426357 0.006706446412381606 0.11346828377950192 358.7653739475089 897453.5249893778 0.016549344970105007 0.0315388737097288 1.692650652872185e-07 6.771432666926825 -0.08516194321687975 LRPVS(ph)PEEIRR ddPTM_A549_MK2206_60min_R1 1 LRPVSPEEIRR 11 2 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8;K7EMJ7 J3KNG6 SPIRE1 Protein spire homolog 1 1 LRPVS(1)PEEIRR 89.01299999999999 6.2262e-05 8996900.0 343.3 520.97 421.99 393.72 510.15 542.4 458.52 416.4 549.63 577.68 849.55 True False 401.24064712083344 547.4851477572162 481.8345274160742 490.1814176747625 435.10761079161864 599.7964079840197 541.8271488209857 475.42597517151773 425.1396825787541 447.18168678381585 638.5832886127989 0.6283293883127644 0.8573433685471535 0.7545367002365005 0.7676076502715701 0.6813639168929826 0.9392610465691383 0.8484831320875973 0.7445011224836316 0.6657544758214539 0.700271514707554 1.0 9.318730988609909 -10.950662518928242 1.1983874685717033 1.0006904222336925 0.762465623559561 0.0 0.12256603900385861 0.32333332815802146 0.8215317419960791 0.06351819720065173 0.01463179887347174 1.1203081130841997e-11 10.950662518928242 -0.2382247986741315 LRPVS(ph)PEEIRR ddPTM_A549_PD325901_60min_R1 3 LRPVSPEEIRR 11 2 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8;K7EMJ7 J3KNG6 SPIRE1 Protein spire homolog 1 1 LRPVS(1)PEEIRR;LRPVS(1)PEEIRR;LRPVS(1)PEEIRR 105.19 3.6961999999999996e-05 54010600.0 3507.77 3696.18 3458.5000000000005 2927.2400000000002 3164.92 3872.95 3654.95 3195.69 3184.8100000000004 3477.95 3866.7400000000002 True False 3863.8762281162108 4007.670060344837 3693.21460764999 3108.04896655561 2942.6269375812653 3841.4099792724805 3794.04112231538 3131.949455979692 3050.9635111751095 3258.351643449341 3391.1554932844183 1.1393981301559106 1.1818007367345191 1.08907262287552 0.9165162059688946 0.8677357742541195 1.1327731762461826 1.1188048232612173 0.9235640955367462 0.899682576401171 0.960838171502878 1.0 11.727561221855629 -6.062255929052832 4.150388507129948 0.966612061120459 1.1573813673887663 0.4448226497267288 0.08076614185700089 0.15061705801400332 5.139378950182586 0.01234401230049701 0.03614791522155289 8.664511269994705e-07 6.062255929052832 0.19076930626830724 LRQEVVS(ph)TAGPR ddPTM_A549_MK2206_60min_R1 2 LRQEVVSTAGPR 12 1 Q96CC6 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 LRQEVVS(0.5)T(0.5)AGPR;LRQEVVS(0.982)T(0.018)AGPR 138.19 4.7422e-09 18785500.0 2486.92 2300.99 2132.29 1759.43 3156.08 2387.7200000000003 1757.41 1833.8600000000001 3230.8199999999997 3681.9 3051.57 True False 2906.651296643585 2418.1005626770775 2434.680785004435 2190.490428983813 2691.8248128338964 2640.386945559741 2076.708648716496 2093.8152709607093 2499.0444285593767 2850.156232809393 2293.7809499525147 1.2671878265898746 1.0541985548912753 1.0614268921602288 0.9549693178109097 1.173531767664921 1.151106842008781 0.9053648513209108 0.9128226786450794 1.0894869575977215 1.2425581583404448 1.0 11.163511909012168 -7.7180318680911055 24.999905268617745 1.0222303347029789 1.1014267946128478 0.10753065579843846 0.1126595508433916 216.6618089622457 124782.54936256283 0.014583388021950064 0.02163060068324309 1.9141154640053e-08 7.7180318680911055 0.0791964599098689 LRQEVVS(ph)TAGPR ddPTM_A549_PD325901_60min_R1 1 LRQEVVSTAGPR 12 1 Q96CC6 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 LRQEVVS(0.975)T(0.025)AGPR 111.43 1.8485e-05 6492100.0 1789.7 1830.6 1656.7 1882.0 1890.7 1979.1 1597.4 2232.9 2639.5 3595.1 3429.6 True False 1971.3890264924942 1984.8710864912591 1769.1336245464045 1998.246865667884 1757.9037545609042 1962.982865768513 1658.1899311308196 2188.363057823836 2528.570994108502 3368.104772456396 3007.780942025645 0.6554297219413946 0.659912116191052 0.588185662003347 0.6643591751472859 0.5844520556663318 0.6526349171048694 0.5513000990072373 0.7275672996152581 0.8406765794604676 1.1197972317053397 1.0 11.554483783405885 -8.991935350559618 0.9539562214211129 0.9598895964585028 0.619937838208606 0.8536310225965251 0.066372963427138 0.10085854048793391 0.18948578561800858 0.012251846258849324 0.011424868692464141 1.0187430277077324e-09 8.991935350559618 -0.33995175824989676 LRQPFFQK ddPTM_A549_PD325901_60min_R1 1 LRQPFFQK 8 1 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 0 50.703 0.031073000000000003 1901000.0 1399.1 1167.3 1390.6 1394.8 1644.9 1466.7 1664.8 1746.2 1728.8 1588.2 1812.3 False True 1541.1356020370179 1265.6724676397066 1484.9744783571143 1480.9536281793655 1529.3678985969382 1454.755681482835 1728.1548750135164 1711.3706711326008 1656.1445480639436 1487.920780956092 1589.398589116246 0.9696344344271352 0.7963216252403111 0.9342996077420739 0.9317698142684402 0.9622305625974622 0.9152868836329616 1.0873011256253997 1.0767410282427488 1.0419944747684786 0.9361533294070816 1.0 10.634265253546628 -7.742336428257797 24.656868926147084 1.030108361198918 0.9160567957202079 0.4840807098843418 0.05660095452749331 120.46185395255871 155483.97591863264 0.0077361462292111684 0.01146410412469706 1.8099374728625062e-08 7.742336428257797 -0.11405156547870998 LRQS(ph)FRR ddPTM_A549_MK2206_60min_R1 2 LRQSFRR 7 2 P49757-4;P49757-2;P49757-3;P49757;P49757-8;P49757-7;P49757-6;P49757-5;G3V3M5;G3V3R1;G3V4S6;G3V433 P49757-4 NUMB Protein numb homolog 1 LRQS(1)FRR;LRQS(1)FRR 67.89699999999999 0.0076087 212495000.0 4293.0 5280.3 3865.5 3879.3 4916.799999999999 3621.6000000000004 3007.1 3603.3 5299.3 6567.4 6186.6 True False 5017.553446227023 5549.044716015181 4413.686025087884 4829.728674148393 4193.545233245576 4004.835308176483 3553.4511454671238 4114.078809643444 4099.017011243187 5083.819778742611 4650.296478526206 1.0789749577036023 1.1932668683898215 0.9491192756137327 1.0385851088098912 0.9017801881256858 0.8611999958862224 0.7641343217310954 0.8846917242032056 0.8814528342808515 1.0932248733426562 1.0 12.183106982487992 -6.046530010911785 1.4146483037712152 0.9177794245381452 1.1389443417339982 0.4087475503733218 0.09182996651767199 0.32813280736308353 1.151399604690564 0.012588289585498593 0.06732083365109716 8.984005085444745e-07 6.046530010911785 0.22116491719585296 LRQS(ph)FRR ddPTM_A549_PD325901_60min_R1 1 LRQSFRR 7 2 P49757-4;P49757-2;P49757-3;P49757;P49757-8;P49757-7;P49757-6;P49757-5;G3V3M5;G3V3R1;G3V4S6;G3V433 P49757-4 NUMB Protein numb homolog 1 LRQS(1)FRR 47.853 0.019196 247400000.0 2256.4 2089.2 2008.7 1775.2 2580.1 2420.6 1955.5 1963.0 2220.7 2247.1 2774.1 True False 2485.468066926115 2265.2642160480377 2145.022461294359 1884.850072228284 2398.8826768617914 2400.8874361473722 2029.9176225906601 1923.8464250562909 2127.371701692273 2105.217722507514 2432.903286468782 1.0216057829958494 0.93109505365334 0.8816718992589856 0.7747328398590125 0.9860164562248713 0.9868404755341184 0.8343601794122149 0.7907615710646034 0.8744168802451779 0.8653108959226716 1.0 11.2484632556145 -10.732284839090227 1.084530769392471 0.9976447296576207 0.8947208994853618 0.0 0.08543593672012849 0.6468647068879215 1.3977767367295562 0.0477933326577042 0.013518264301076444 1.8523163531635043e-11 10.732284839090227 -0.10292383017225892 LRQS(ph)GEELPPTS ddPTM_A549_MK2206_60min_R1 2 LRQSGEELPPTS 12 1 I3L0X5;O75391 I3L0X5 SPAG7 Sperm-associated antigen 7 1 LRQS(0.999)GEELPPTS;LRQS(1)GEELPPTS 92.295 0.00022219 10567000.0 4888.1 4753.0 4916.0 4357.3 5439.8 4776.3 4103.4 4399.4 6347.900000000001 6390.400000000001 6912.2 True False 5713.091777428917 4994.9073982955815 5613.162721337997 5424.83869560663 4639.612626059488 5281.724895748656 4848.934664730069 5023.028422597439 4910.110785513296 4946.8042016744475 5195.709972984974 1.0995786537612882 0.9613522356456647 1.0803456602704082 1.0440995982864723 0.8929699021275423 1.016554989252848 0.9332573777100802 0.9667645901550721 0.9450317302242336 0.9520939828041386 1.0 12.343105185768454 -6.66402825214049 24.999999999884704 0.9683762264810523 1.0427049040529284 0.46016668117076187 0.045050569062418645 10.778392073417185 2757.1043902787696 0.006028912871086286 0.012550181666400017 2.167563093843251e-07 6.66402825214049 0.07432867757187611 LRQS(ph)GEELPPTS ddPTM_A549_PD325901_60min_R1 1 LRQSGEELPPTS 12 1 I3L0X5;O75391 I3L0X5 SPAG7 Sperm-associated antigen 7 1 LRQS(1)GEELPPTS 71.548 0.0020214 14427000.0 3708.1 3963.5 3070.5 3808.4 4264.0 3325.0 3872.7 3739.8 3980.6 3978.2 5285.9 True False 4084.543582241056 4297.518054904458 3278.882594416451 4043.6362184960544 3964.511350001427 3297.9223024002363 4020.077717722756 3665.2067551836576 3813.3092249093784 3727.015773076141 4635.767810080872 0.8810932189828119 0.9270347935802866 0.707300867676384 0.8722689280733222 0.8552005864875846 0.7114079991730008 0.8671870297258536 0.7906363962434343 0.8225841718424751 0.8039694664973143 1.0 12.178592593104462 -10.570009269393962 0.7753599613059708 1.0050850069447999 0.8241791168115498 0.0 0.08651863673286225 0.4489608240465026 0.46350065967582826 0.04862162945442204 0.012151815896609118 2.691477357582897e-11 10.570009269393962 -0.1809058901332501 LRRPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_A549_MK2206_60min_R1 4 LRRPSPPEPWDEEDGASCSTFFGSEER 27 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LRRPS(0.992)PPEPWDEEDGAS(0.007)CSTFFGSEER;LRRPS(0.98)PPEPWDEEDGAS(0.005)CS(0.006)T(0.006)FFGS(0.003)EER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER 90.67200000000001 1.6619e-09 36920500.0 8541.0 10659.7 9043.6 8680.099999999999 13596.3 10753.4 9452.0 10300.2 14697.400000000001 15255.5 15668.3 True False 9982.511992598427 11202.233198740034 10326.11846759404 10806.724889664494 11596.302280909704 11891.31765047079 11169.306051330275 11760.284893039541 11368.462366924985 11809.271954595099 11777.42868691886 0.8475968955503811 0.9511611996583181 0.8767718949606731 0.9175793101313767 0.9846208870523383 1.0096701042799288 0.9483654155966977 0.9985443517141938 0.9652754152994267 1.0027037538093189 1.0 13.523736975971332 -6.686698457847715 4.010002352423054 0.9838545225136538 0.897798084336197 0.6937771683778824 0.028551106070345344 0.09455175510494629 2.9526662410609172 0.0037810062950722925 0.008051375228945593 2.0573185509096666e-07 6.686698457847715 -0.08605643817745678 LRRPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_A549_PD325901_60min_R1 5 LRRPSPPEPWDEEDGASCSTFFGSEER 27 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LRRPS(0.999)PPEPWDEEDGASCSTFFGSEER;LRRPS(0.999)PPEPWDEEDGASCSTFFGSEER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER 83.054 7.7317e-07 55146600.0 8880.57 8662.3 9728.279999999999 9955.0 10747.7 10455.6 9406.99 11270.7 10452.62 9768.7 11642.4 True False 9782.118928869895 9392.302421344495 10388.499581699936 10569.897740554623 9992.818629552141 10370.453060143138 9764.978152152447 11045.897046806895 10013.332731365188 9151.902614863226 10210.458607254308 0.9580489285681951 0.9198707700231475 1.0174371182817523 1.0352030351550459 0.9786846031041604 1.01566966372844 0.956370181571927 1.0818218330525355 0.9806937294913407 0.8963263029498987 1.0 13.317760046504887 -5.76215486912094 24.999855155733975 0.9995965967957599 0.9389598414340483 0.1853813346025205 0.045389521764922156 14.175819915145496 495415.1470803132 0.004265870213726808 0.014528153911616552 1.7291996178330102e-06 5.76215486912094 -0.060636755361711536 LRRPS(ph)VNGEPGSVPPPR ddPTM_A549_MK2206_60min_R1 4 LRRPSVNGEPGSVPPPR 17 2 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 LRRPS(1)VNGEPGSVPPPR;LRRPS(1)VNGEPGSVPPPR;LRRPS(1)VNGEPGSVPPPR;LRRPS(1)VNGEPGSVPPPR 112.44 1.0771e-09 87510000.0 15541.98 18047.300000000003 15682.68 15921.8 21701.699999999997 15442.5 15989.2 14847.97 25217.399999999998 25624.3 27379.0 True False 18165.08625907093 18965.830483749174 17906.719842691808 19822.641714756766 18509.408678068165 17076.615100098108 18894.230672442864 16952.71521750105 19505.699163912937 19835.75283315076 20580.038678041103 0.8826555937648977 0.9215643750944799 0.8701013697218303 0.9631974956348125 0.8993864864703923 0.8297659381135591 0.9180852848737843 0.8237455469697242 0.9477970119038461 0.9638345750202844 1.0 14.328958073179079 -9.098856019140145 2.6589161815328217 0.9805874171805806 0.8908920189412669 0.45351188731749115 0.03973236770770554 0.14857868439599406 2.1770592241502404 0.007556735125838548 0.007358342384496203 7.964233434371541e-10 9.098856019140145 -0.08969539823931372 LRRPS(ph)VNGEPGSVPPPR ddPTM_A549_PD325901_60min_R1 4 LRRPSVNGEPGSVPPPR 17 2 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 LRRPS(1)VNGEPGSVPPPR;LRRPS(1)VNGEPGSVPPPR;LRRPS(0.999)VNGEPGS(0.001)VPPPR;LRRPS(1)VNGEPGSVPPPR 107.45 3.0624e-09 69286000.0 13956.0 14478.900000000001 16207.699999999999 17104.699999999997 18376.8 16412.5 15637.499999999998 16885.699999999997 18620.9 19021.4 19688.0 True False 15372.802846135806 15699.087716703965 17307.651986817615 18161.21847140778 17086.076964518343 16278.842041547032 16232.593619668332 16548.9014669246 17838.328328924043 17820.38555778756 17266.500812514845 0.8903253191285592 0.9092223078184544 1.0023832955356504 1.0518181227689423 0.9895506420232101 0.942799135638881 0.9401206298790353 0.9584397931357275 1.0331177418411688 1.0320785752299768 1.0 14.075688118934435 -5.73197619606253 4.986466312669721 1.0023564111379137 0.8963068895957372 0.5062220572780904 0.035510372341029196 0.1111114743481455 6.77069705836782 0.0054449135522020116 0.02125661958055643 1.8536332193638308e-06 5.73197619606253 -0.1060495215421765 LRS(ph)DGAAIPR ddPTM_A549_MK2206_60min_R1 2 LRSDGAAIPR 10 1 O43295-2;O43295 O43295-2 SRGAP3 SLIT-ROBO Rho GTPase-activating protein 3 1 LRS(1)DGAAIPR;LRS(1)DGAAIPR 89.43 0.00019045 6186800.0 709.11 609.02 1009.8599999999999 607.06 899.25 713.63 582.61 650.3499999999999 884.76 1139.55 1062.22 True False 828.7904319250046 640.0165166652582 1153.0733331510144 755.789727251959 766.9715162292716 789.1458529307447 688.4626955740082 742.539104113344 684.3632726713946 882.1248635481527 798.4414582193946 1.038010267870222 0.801582270154859 1.4441551365863252 0.9465812671319032 0.9605857866395063 0.988357812344339 0.862258201257923 0.9299856570189649 0.8571239201401116 1.1048084420808766 1.0 9.641042822792924 -6.483286019706142 24.999895114612446 0.9322139910823583 1.0869634396981922 0.1250360626549969 0.15383075263769252 658.6585470458629 415894.12811959366 0.01936417192357474 0.04499147274388982 3.2863512552086577e-07 6.483286019706142 0.15474944861583395 LRS(ph)DGAAIPR ddPTM_A549_PD325901_60min_R1 2 LRSDGAAIPR 10 1 O43295-2;O43295 O43295-2 SRGAP3 SLIT-ROBO Rho GTPase-activating protein 3 1 LRS(1)DGAAIPR;LRS(1)DGAAIPR 132.31 2.8132e-07 11858200.0 1779.48 1421.78 1578.4 1887.8 2086.72 1683.31 1740.23 1908.54 2150.92 2424.3 2200.54 True False 1960.1314996160606 1541.598390337344 1685.5197156902552 2004.4051184951284 1940.1559859931933 1669.6016814596517 1806.4554049403953 1870.4726724793331 2060.524312425785 2271.2292842663746 1929.887530372378 1.0156713636249295 0.7988021923950602 0.8733771731065741 1.0386123994015195 1.005320753390657 0.8651290063196049 0.9360418037375648 0.969213305460562 1.06769139651791 1.176871319453592 1.0 10.9143010574912 -8.55340504750974 4.284360515021573 1.0318604269043732 0.9309709914107052 0.3467088853803546 0.08139081690934513 0.19703340305463357 8.30040279919709 0.012110684856419217 0.013977007825034655 2.7963720488766343e-09 8.55340504750974 -0.10088943549366802 LRS(ph)FHR ddPTM_A549_PD325901_60min_R1 1 LRSFHR 6 1 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 LRS(1)FHR 51.346000000000004 0.026101 2466900.0 593.98 492.67 561.36 481.0 738.91 605.45 476.47 640.73 712.28 564.76 464.89 True False 654.2804123350348 534.1890299255155 599.4572653319065 510.710277569741 687.0115107011143 600.5194159363076 494.6023265843881 627.9501375070391 682.3453486204222 529.1009572174554 407.7114771805171 1.604763292070259 1.310213373485681 1.4702977445653134 1.252626688612007 1.685043343523379 1.4729028971397424 1.213118477813661 1.5401826356460646 1.673598578433712 1.2977337819293036 1.0 8.671404759400685 -10.949423242769695 1.2019745380857447 0.9991155086830253 1.4787371679095158 0.2924037640508721 0.17235212676277267 0.2812526098707734 0.7201225767448141 0.1112823302285905 0.025762321232032783 1.1235095212615689e-11 10.949423242769695 0.47962165922649047 LRS(ph)GSDEEER ddPTM_A549_MK2206_60min_R1 1 LRSGSDEEER 10 1 Q9HCC9-5;Q9HCC9-4;Q9HCC9-3;Q9HCC9-2;Q9HCC9 Q9HCC9-5 ZFYVE28 Lateral signaling target protein 2 homolog 1 LRS(0.956)GS(0.044)DEEER 83.087 0.00027912 4014600.0 777.05 810.46 637.09 650.88 986.27 618.47 417.45 414.29 994.27 1098.1 1328.7 True False 908.1970429514812 851.7089522454522 727.438941850534 810.3456292191131 841.1909895039689 683.9160848928402 493.2952614396763 473.0168762099136 769.0694325229298 850.0384473364279 998.7471197455427 0.9093363324871149 0.8527773801865357 0.7283514790369241 0.811362168859691 0.8422462231663653 0.6847740247472113 0.4939140766336892 0.47361025314438676 0.7700341931587954 0.8511047797094 1.0 9.963975627279856 -10.14416711962767 1.0476677304951088 0.9747454463474251 0.7284206899784591 0.21232607643587686 0.13788067396888268 0.414404702265999 0.9084627316546182 0.05632460700014895 0.027564498701538355 7.175181320236536e-11 10.14416711962767 -0.246324756368966 LRS(ph)GSDEEER ddPTM_A549_PD325901_60min_R1 1 LRSGSDEEER 10 1 Q9HCC9-5;Q9HCC9-4;Q9HCC9-3;Q9HCC9-2;Q9HCC9 Q9HCC9-5 ZFYVE28 Lateral signaling target protein 2 homolog 1 LRS(0.749)GS(0.251)DEEER 46.964 0.0095111 3963800.0 1202.7 645.61 388.94 834.21 868.59 1092.9 649.4 843.37 722.47 992.88 641.01 True False 1324.7972186190561 700.0178204684918 415.3358072862187 885.7372570716295 807.5832348728278 1083.9997847498407 674.113272365315 826.5483237390337 692.1070983571016 930.1893873540391 562.1698336971831 2.3565782779669173 1.2452070148708148 0.7388084212109154 1.5755688120909355 1.4365467274571664 1.9282425341480438 1.1991274379344072 1.470282242473117 1.231135249298898 1.6546412340137988 1.0 9.134862229862373 -9.201573071248989 0.7703360967906565 1.0405481891835153 1.4821707939536204 0.0 0.4311210253229532 0.7073404452374165 0.9050141246388325 0.1162000489655282 0.0913616510712167 6.286760687298071e-10 9.201573071248989 0.44162260477010506 LRS(ph)KDSVEK ddPTM_A549_PD325901_60min_R1 1 LRSKDSVEK 9 2 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 LRS(0.994)KDS(0.006)VEK 86.911 0.00023869 6980400.0 2256.5 2160.6 2535.6 2508.4 2155.3 2455.9 2255.8 1791.8 2260.0 2550.6 2590.6 True False 2485.5782188524972 2342.681344626359 2707.6810638014517 2663.338171010268 2003.9191633813498 2435.899964651051 2341.6457034211244 1756.0611433600923 2165.020059361703 2389.5546807118803 2271.972623166443 1.094017680278362 1.0311221714288834 1.1917753920941894 1.1722580386106853 0.8820173020344286 1.0721519880182988 1.030666337940982 0.7729235491018698 0.9529252409495671 1.051753289782851 1.0 11.149729735411386 -6.753654583305056 24.9999238363424 0.9673398784390994 1.120744110237043 0.42242757456953284 0.08786307845629501 132.0430000801107 424036.0695520389 0.012026874222180503 0.024675774667905326 1.763377993854719e-07 6.753654583305056 0.1534042317979436 LRS(ph)PFLQK ddPTM_A549_MK2206_60min_R1 2 LRSPFLQK 8 1 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 LRS(1)PFLQK;LRS(1)PFLQK 94.69200000000001 0.00070508 103188000.0 4109.0 4271.0 4117.5 3437.3 5131.3 4106.9 3891.7 3852.0 5797.6 5174.4 5419.6 True False 4802.498744595119 4488.375657084038 4701.423414383481 4279.438654306262 4376.492567392008 4541.489432060415 4598.771515019257 4398.032796255248 4484.452856864773 4005.4994462231284 4073.763746649314 1.1788849435721924 1.1017761304336178 1.154073654430849 1.0504876866819084 1.0743118255180335 1.1148141410497374 1.1288753597460737 1.0795993753620707 1.1008131879403298 0.9832429407615174 1.0 11.992146599914195 -14.999999999819549 0.18141840543711912 0.5335559921611894 1.131489216770612 0.6696920686785484 0.03276550892531577 24.380937837434548 0.2720557203516933 4.024108896448107 0.035995917119856884 1.0000000004155044e-15 14.999999999819549 0.5979332246094227 LRS(ph)PFLQK ddPTM_A549_PD325901_60min_R1 2 LRSPFLQK 8 1 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 LRS(1)PFLQK;LRS(1)PFLQK 88.596 0.00074769 206260000.0 4532.1 5091.5 5212.8 5017.0 6036.3 5115.700000000001 5625.7 5276.299999999999 5846.299999999999 6214.9 5501.2 True False 4992.195455644321 5520.578573620803 5566.571955112876 5326.8886955663 5612.331112104506 5074.039435304931 5839.78909200116 5171.060057322726 5600.600342055898 5822.490153358532 4824.58727498002 1.0347404184257387 1.1442592410443369 1.1537923635417973 1.104112827058012 1.1632769379485934 1.0517043523325929 1.2104225209658672 1.0718139734230718 1.1608454822861696 1.2068369420019756 1.0 12.23618981526923 -10.86936583594504 1.0146493094216338 0.9969106003789449 1.1257496320171714 0.0 0.07904794262062849 0.3741131923418625 0.6561575260551928 0.035946565189056326 0.007885698410582438 1.35093409957149e-11 10.86936583594504 0.12883903163822652 LRS(ph)PPEALVQGR ddPTM_A549_MK2206_60min_R1 2 LRSPPEALVQGR 12 1 Q9UHB6;Q9UHB6-4;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 LRS(1)PPEALVQGR;LRS(1)PPEALVQGR 85.493 0.00010916 58447000.0 3384.2 3559.9 3706.3 3377.8 4595.4 3952.0 3531.4 3435.6 5332.6 5959.9 4738.3 True False 3955.370224253784 3741.083704437711 4231.909071215424 4205.361151635205 3919.4227474895674 4370.198016874714 4173.009668817997 3922.606821083734 4124.774614412357 4613.554450669683 3561.649339572743 1.1105445391006044 1.0503795707430572 1.1881880184541371 1.1807341910137852 1.1004516092984447 1.2270152393494653 1.1716509041057348 1.1013455978106736 1.1581080059125546 1.295342132480433 1.0 11.798329768265432 -10.724967777171864 0.7619672306308753 0.9900228851477278 1.1452024375050578 0.0 0.09964993748484657 0.47271156295797817 0.43629603225434455 0.04564985735854478 0.009198272098415334 1.8837888535328098e-11 10.724967777171864 0.15517955235732994 LRS(ph)PPEALVQGR ddPTM_A549_PD325901_60min_R1 2 LRSPPEALVQGR 12 1 Q9UHB6;Q9UHB6-4;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 LRS(1)PPEALVQGR;LRS(1)PPEALVQGR 113.98 8.259299999999999e-06 83350000.0 4265.5 4306.0 4658.2 4195.5 5217.9 5074.5 5036.7 4905.3 5064.0 4846.4 5621.4 True False 4698.530419904868 4668.881731908314 4974.3334640321455 4454.646506328168 4851.412704777774 5033.174954445114 5228.374374687995 4807.459943366595 4851.177690534367 4540.397476908203 4930.003436990598 0.9530481022895539 0.9470341738257124 1.0089918856260691 0.9035787831108287 0.9840586861211607 1.02092727089811 1.0605214461837233 0.9751433249103765 0.9840110159224659 0.9209724769846773 1.0 12.267372937051798 -6.987784005842392 24.85038604844556 0.9984525052500074 0.9551013936397932 0.18525457374419863 0.039014161886620546 206.13467195165802 419326.60403645155 0.00445177411488458 0.008408635321315564 1.0285277039797278e-07 6.987784005842392 -0.04335111161021421 LRS(ph)PRGS(ph)PDGSLQTGKPSAPK ddPTM_A549_MK2206_60min_R1 4 LRSPRGSPDGSLQTGKPSAPK 21 3 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 2 LRS(1)PRGS(0.975)PDGS(0.024)LQTGKPSAPK;LRS(0.997)PRGS(0.967)PDGS(0.036)LQTGKPSAPK;LRS(0.997)PRGS(0.983)PDGS(0.017)LQT(0.003)GKPS(0.001)APK;LRS(1)PRGS(0.925)PDGS(0.075)LQT(0.001)GKPSAPK 161.2 3.8236e-28 111494800.0 11807.07 11560.67 12671.3 8966.880000000001 17578.899999999998 13474.2 13618.5 12650.800000000001 18623.4 17482.8 19104.4 True False 13799.81476085342 12149.058723386017 14468.280876910116 11163.766002538534 14993.067096628023 14900.030900549908 16092.805169280704 14444.089641450135 14405.229635458707 13533.423337668077 14360.250225383264 0.9609731407368365 0.8460199880021079 1.0075228947846533 0.7774074843630088 1.0440672593661486 1.0375885285210784 1.120649356153625 1.005838297714247 1.0031322163172294 0.9424225292221103 1.0 13.809793267691914 -6.804891160242036 24.999980915609857 1.0162478440688032 0.9020931924143093 0.43034724874734864 0.06835512583645616 93.03994161843251 53530.25656719294 0.00872253969091704 0.016484130606990426 1.5671437671927356e-07 6.804891160242036 -0.1141546516544939 LRS(ph)PRGS(ph)PDGSLQTGKPSAPK ddPTM_A549_PD325901_60min_R1 4 LRSPRGSPDGSLQTGKPSAPK 21 3 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 2 LRS(0.894)PRGS(0.72)PDGS(0.363)LQT(0.015)GKPS(0.008)APK;LRS(1)PRGS(0.98)PDGS(0.02)LQTGKPSAPK;LRS(0.997)PRGS(0.597)PDGS(0.406)LQTGKPSAPK;LRS(0.996)PRGS(0.645)PDGS(0.307)LQT(0.051)GKPS(0.001)APK 143.27 4.872099999999999e-22 193501000.0 17494.8 17757.4 19317.600000000002 16488.600000000002 20686.7 17593.8 17197.4 19945.0 19112.100000000002 20888.8 21328.1 True False 19270.859217008943 19253.878417600718 20628.608502165534 17507.063373672416 19233.737557240725 17450.521926005807 17851.85646777838 19547.181328450177 18308.884901118054 19569.8776030951 18704.87890996535 1.0302584320255639 1.029350604742107 1.1028464071571873 0.9359624009298035 1.0282738343199653 0.9329395827688965 0.9543957249713866 1.0450311612568672 0.9788293733012982 1.0462445492052295 1.0 14.191127005873476 -6.261538126136942 24.99999395291364 0.9869531635385507 1.0516716913619761 0.31714013523314544 0.041544348188964075 6.715205838619934 1700514.3378704856 0.00488304408715864 0.01207061897506575 5.475980259468062e-07 6.261538126136942 0.06471852782342546 LRS(ph)PRGSPDGS(ph)LQTGKPSAPK ddPTM_A549_MK2206_60min_R1 2 LRSPRGSPDGSLQTGKPSAPK 21 3 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 2 LRS(0.999)PRGS(0.275)PDGS(0.72)LQT(0.004)GKPS(0.001)APK;LRS(1)PRGS(0.209)PDGS(0.789)LQT(0.002)GKPSAPK 144.89 4.1365e-22 84796000.0 10737.099999999999 10093.5 9782.2 9202.8 14679.7 11622.099999999999 11339.1 11756.199999999999 16167.3 14619.9 14888.1 True False 12549.25998310837 10607.216037175776 11169.463053839007 11457.486413129387 12520.335576080999 12851.942907874398 13399.267694312208 13422.677351852533 12505.432363872958 11317.254436038478 11190.973879343426 1.121373360210598 0.9478367255199153 0.9980778415054542 1.023814954503459 1.1187887409147956 1.1484204186730191 1.1973281180688755 1.1994199518800093 1.1174570237319374 1.0112841436372346 1.0 13.450047969908692 -6.675708450657903 6.748508174284967 1.0893919703080346 1.014653685401096 0.21949797399458126 0.07332933093732903 0.3468299466129887 22.67312462481033 0.012329247819070147 0.025761352118846406 2.110044183463974e-07 6.675708450657903 -0.07473828490693868 LRS(ph)PRGSPDGS(ph)LQTGKPSAPK ddPTM_A549_PD325901_60min_R1 2 LRSPRGSPDGSLQTGKPSAPK 21 3 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 2 LRS(1)PRGS(0.114)PDGS(0.858)LQT(0.028)GKPSAPK;LRS(0.981)PRGS(0.078)PDGS(0.941)LQTGKPSAPK 131.13 5.7086999999999995e-18 210668000.0 8895.6 10037.6 10432.8 9577.5 11509.3 10561.3 9676.2 10443.1 11642.699999999999 10865.7 13016.5 True False 9798.674763405399 10883.503778960263 11140.832545522857 10169.080422919329 10700.926472929501 10475.292274387852 10044.433086019813 10234.804178046541 11153.397807579862 10179.637847648042 11415.553018391884 0.8583618110851492 0.9533926005534359 0.9759345454025383 0.8908092675436459 0.9373988676403999 0.9176333601631779 0.879890187521969 0.896566654419369 0.9770352596681338 0.8917340956892209 1.0 13.478713131145867 -8.868071366187289 4.94981099206639 0.9900540930412779 0.916270650174005 0.026788456123356008 0.04361352958847436 0.12245325364008687 4.796015144858467 0.005685119005939213 0.006018326097538709 1.3549667368175581e-09 8.868071366187289 -0.0737834428672729 LRS(ph)PRGSPDGSLQTGKPSAPK ddPTM_A549_MK2206_60min_R1 1 LRSPRGSPDGSLQTGKPSAPK 21 3 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 LRS(0.81)PRGS(0.184)PDGS(0.003)LQT(0.003)GKPSAPK 41.763000000000005 0.022283 2717500.0 762.98 657.19 619.6 486.73 1029.6 825.64 715.75 723.75 877.6 1045.9 1270.8 True False 891.7523709299553 690.6381639145536 707.4685968553753 605.9788718501402 878.1472039028727 913.0086767845239 845.7925101819341 826.343778891417 678.8250012392235 809.6304635909031 955.2252877042491 0.9335518881343247 0.72301076280592 0.7406300963364124 0.6343831969801867 0.9193089998835532 0.9558045505461995 0.8854377297890412 0.8650773692114235 0.7106438763474162 0.8475806430300198 1.0 9.899697219386876 -6.78646492400458 24.99465527654611 0.8725922209998225 0.7541690834482555 0.28155086748519176 0.09539147540569763 302.3281250624096 301954.27029770915 0.01773421617237151 0.03352408183963038 1.6350652025972035e-07 6.78646492400458 -0.11842313755156697 LRS(ph)PRGSPDGSLQTGKPSAPK ddPTM_A549_PD325901_60min_R1 1 LRSPRGSPDGSLQTGKPSAPK 21 3 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 LRS(0.983)PRGS(0.017)PDGSLQTGKPSAPK 58.626999999999995 0.0010207 2453600.0 942.36 1035.7 833.03 535.47 859.42 1115.0 1092.6 861.64 941.19 1279.6 799.76 True False 1038.0276934712338 1122.9820737894668 889.5644252163285 568.5447657593952 799.0573040380453 1105.9198096770713 1134.1794908936608 844.4539142564964 901.6350573763899 1198.8058376220986 701.3945900963464 1.4799482461486424 1.6010703385026244 1.2682795644234073 0.8105918890553427 1.1392407573720857 1.5767441398787487 1.6170348430230483 1.2039641111866843 1.2854890387057842 1.709174628018482 1.0 9.454082492804469 -10.284396084858702 0.6684334389789743 0.9948125016867478 1.3336089021697728 0.0 0.30820149347589926 0.9916965019048922 0.8078235247829347 0.17532020715635252 0.05262425094090414 5.195219664524245e-11 10.284396084858702 0.33879640048302495 LRS(ph)PSKVIESLQEK ddPTM_A549_MK2206_60min_R1 2 LRSPSKVIESLQEK 14 2 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 LRS(0.986)PS(0.014)KVIESLQEK;LRS(0.982)PS(0.014)KVIES(0.005)LQEK 75.682 0.00017244 5612500.0 2147.59 2512.5 2056.46 2237.9 3340.4 2504.1000000000004 2265.6 2134.93 4028.1 3560.3 3891.8 True False 2510.0506884655715 2640.3755182448235 2348.096950757269 2786.1856004631495 2849.031585001122 2769.082199912947 2677.2301935985884 2437.5628654489155 3115.7417815539184 2756.025757264262 2925.358651784228 0.8580317790895988 0.9025818139031984 0.8026697681411211 0.9524253030526036 0.973908475551689 0.9465787035118017 0.9151801581545217 0.8332526556913638 1.0650802696119233 0.9421155096942774 1.0 11.51439779600114 -8.77079839289639 24.99963368835021 1.0307323550315033 0.9015743377717691 0.3687724599935561 0.05748733052140498 108.58009125936422 290036.38889462315 0.009510472616090223 0.010190999828585196 1.6951245243159163e-09 8.77079839289639 -0.1291580172597342 LRS(ph)PSKVIESLQEK ddPTM_A549_PD325901_60min_R1 1 LRSPSKVIESLQEK 14 2 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 LRS(0.994)PS(0.006)KVIESLQEK 110.74 2.1672e-06 4479500.0 1642.1 1820.1 1983.7 1868.6 2182.4 2159.7 2003.3 2399.2 2887.8 2604.6 2614.5 True False 1808.804783149872 1973.4862146415055 2118.3258109571457 1984.0191781014926 2029.1157528712731 2142.1121192462524 2079.536677747823 2351.3460738640115 2766.435808595011 2440.145111496184 2292.9330746810265 0.7888606968615941 0.8606819956644571 0.9238498211518141 0.8652756593767974 0.8849432961114866 0.9342235684503112 0.906933002410945 1.0254752307548753 1.2065052570188315 1.0642025004744793 1.0 11.162978531323116 -8.329014264828407 2.9785125355277726 1.0980314656469987 0.8809456361234757 0.7225646155256393 0.05838695015322876 0.13382540288826011 2.342213888591405 0.013590372579804874 0.01687259319821335 4.687979837625971e-09 8.329014264828407 -0.21708582952352307 LRS(ph)PSNDSAHR ddPTM_A549_MK2206_60min_R1 3 LRSPSNDSAHR 11 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LRS(0.998)PS(0.002)NDSAHR;LRS(0.97)PS(0.02)NDS(0.01)AHR;LRS(0.997)PS(0.002)NDS(0.001)AHR 78.505 0.0002918 28989700.0 1914.13 2753.4100000000003 2333.32 2364.28 2832.14 2167.56 2122.3799999999997 2338.2999999999997 3527.0 4227.41 4160.88 True False 2237.1883480145675 2893.5468082350158 2664.219861869889 2943.5287061365616 2415.535957713173 2396.929760490121 2507.988973468296 2669.7611857434176 2728.140131461649 3272.4351449362466 3127.6186615540246 0.7153008694809911 0.9251597209735585 0.851836540886386 0.9411405368306653 0.7723243205464704 0.7663753225270613 0.8018845149818066 0.8536082798588014 0.8722739012262173 1.0463024745191496 1.0 11.610848905803936 -10.029801998563293 0.652626977391215 0.9977634437127835 0.8310506894850006 0.5469205437169401 0.06591641592109362 0.4656159091196716 0.39158859774608934 0.03760277955246181 0.014237740358096612 9.336798825848638e-11 10.029801998563293 -0.16671275422778287 LRS(ph)PSNDSAHR ddPTM_A549_PD325901_60min_R1 2 LRSPSNDSAHR 11 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LRS(0.995)PS(0.004)NDSAHR;LRS(0.94)PS(0.058)NDS(0.001)AHR 81.128 0.0003428 15831200.0 1855.41 1674.78 1781.1 1792.6999999999998 1748.71 1908.0 1742.72 1899.77 1960.6 2167.04 2582.7 True False 2043.76985731935 1815.9195882409217 1901.976156624374 1903.4310074828995 1625.8866423219959 1892.461880595383 1809.0401632529754 1861.8775970092656 1878.2028001701585 2030.2127245706395 2265.044273084218 0.9023090107357736 0.8017148317230279 0.839708159008535 0.840350464713467 0.7178167162746416 0.8355076777455195 0.7986776173649267 0.8220049467174535 0.8292124010506368 0.8963236386572622 1.0 11.145323534463314 -10.48528259236512 0.6532787293982829 1.0110767497008712 0.8156492957255428 0.4354225979262081 0.05118460656198604 0.3421984772534386 0.24325777521080255 0.03632541814783002 0.008550105261572651 3.271277658739788e-11 10.48528259236512 -0.19542745397532846 LRS(ph)PSVLEVR ddPTM_A549_PD325901_60min_R1 1 LRSPSVLEVR 10 1 H0YI66;F8VNX9;H0YI02;J3KPG1;Q96QF0-5;Q96QF0-7;Q96QF0-6;Q96QF0-3;Q96QF0-4;Q96QF0-2;Q96QF0 H0YI66 RAB3IP Rab-3A-interacting protein 1 LRS(0.986)PS(0.014)VLEVR 45.28 0.0133 2305700.0 464.81 267.94 371.64 360.78 373.2 256.69 452.28 323.9 375.78 390.86 401.24 True False 511.9971690249631 290.5202441355119 396.8617252528677 383.06456120917085 346.9877194701059 254.59960174529823 469.49176289711215 317.43956040536557 359.98727341015086 366.18103289541494 351.89002366992344 1.454991999162846 0.8255995469994426 1.1278004449058443 1.088591706051006 0.9860686468212695 0.7235203746046388 1.3342002651871154 0.9020987781771479 1.0230107397071955 1.0406121465918472 1.0 8.4589808030213 -5.245864306511965 24.25585939456361 1.0084392651405374 1.4549924989873462 0.41939093006763983 0.15211487559645115 1272.8050214060556 1982156.4981319895 0.018087110289921108 0.587522267844127 5.67721960043802e-06 5.245864306511965 0.4465532338468088 LRS(ph)SLIFSTSQAEGAAGAAAATEK ddPTM_A549_MK2206_60min_R1 2 LRSSLIFSTSQAEGAAGAAAATEK 24 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LRS(0.475)S(0.475)LIFS(0.017)T(0.017)S(0.017)QAEGAAGAAAATEK;LRS(0.498)S(0.498)LIFS(0.001)T(0.001)S(0.001)QAEGAAGAAAATEK 138.09 1.0305999999999999e-23 2941900.0 1557.4 1281.7 1477.6 1537.6 2129.0 1653.7 1741.2 1670.6 3058.1 2279.7 2306.6 True False 1820.2510452257086 1346.9330554166727 1687.1458985046831 1914.312069025487 1815.8269202692472 1828.6934363627809 2057.553501542136 1907.4126659979286 2365.445232782213 1764.714186679589 1733.8075610785486 1.0498576001672217 0.7768642181827762 0.9730871732126727 1.10410873271002 1.0473059185067095 1.0547268782385553 1.18672541735958 1.1001293966046528 1.3643066773285624 1.0178258685074681 1.0 10.75972806437265 -6.662028947565573 0.8776874991941168 1.1681198700564839 0.9060948229580412 0.2655490645171784 0.11716115579168526 0.6201138877653435 0.8586894753068343 0.02403399326044023 0.09759871948790641 2.177564623616101e-07 6.662028947565573 -0.26202504709844265 LRS(ph)SLIFSTSQAEGAAGAAAATEK ddPTM_A549_PD325901_60min_R1 2 LRSSLIFSTSQAEGAAGAAAATEK 24 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LRS(0.497)S(0.497)LIFS(0.002)T(0.002)S(0.002)QAEGAAGAAAATEK;LRS(0.5)S(0.5)LIFSTSQAEGAAGAAAATEK 166.44 5.0352e-35 14211400.0 5080.700000000001 4772.0 5738.799999999999 5776.700000000001 6052.3 6831.5 5656.7 6370.9 6157.0 6686.5 5833.5 True False 5596.488923786345 5174.153187335455 6128.269478207823 6133.513639162421 5627.207327301509 6775.866528976604 5871.968813965013 6243.827401625634 5898.242701544253 6264.313248874774 5116.016481603276 1.0939153429061075 1.0113636666225048 1.1978596042926204 1.1988846519978915 1.0999197026703156 1.3244418882038391 1.147761903246417 1.2204470849689133 1.1528975175810692 1.2244513424459573 1.0 12.320805196631639 -10.400364717054632 0.8414878160992358 1.0035645424891182 1.1620967336128118 0.0 0.10017319662302492 0.49272154806778895 0.6513153278451601 0.04541713104100545 0.014864008111328013 3.977729836587513e-11 10.400364717054632 0.15853219112369366 LRS(ph)YEDMIGEEVPSDQYYWAPLAQHER ddPTM_A549_MK2206_60min_R1 2 LRSYEDMIGEEVPSDQYYWAPLAQHER 27 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 LRS(0.675)Y(0.273)EDMIGEEVPS(0.05)DQY(0.002)YWAPLAQHER;LRS(0.524)Y(0.476)EDMIGEEVPSDQYYWAPLAQHER 64.315 0.00015189 6337800.0 1114.16 953.17 926.3299999999999 692.86 1479.69 1328.96 1056.86 1015.3500000000001 1516.23 1157.33 1428.35 True False 1302.2029694032854 1001.6822816817589 1057.6975231198182 862.6107311036678 1262.0295611334907 1469.5896651077487 1248.8777817825764 1159.2789718789638 1172.8063259217738 895.8883491994064 1073.6512745454547 1.2128733046534046 0.9329679994147403 0.9851406580480326 0.8034366013944948 1.1754557471817733 1.3687774605678367 1.163206165159452 1.079753733231268 1.0923531259424042 0.834431412172163 1.0 10.068309761989088 -3.6285989699815757 10.732918090792804 1.063763674206274 1.2060297601109091 0.0 0.16136419093695994 0.0 0.0 0.019435443339544913 0.0 0.0002351803487336007 3.6285989699815757 0.1422660859046352 LRSDAGLES(ph)DTAMK ddPTM_A549_PD325901_60min_R1 1 LRSDAGLESDTAMK 14 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 LRS(0.001)DAGLES(0.937)DT(0.062)AMK 48.883 0.0065563 7550300.0 1831.8 1863.9 1728.2 2480.6 2014.6 2324.2 1465.3 1957.2 2436.8 1868.5 2418.5 True False 2017.7629875001126 2020.9773943576197 1845.486044510832 2633.821028148649 1873.1014459927005 2305.272485786053 1521.0627933429257 1918.1621106063023 2334.3897702002664 1750.5225911197954 2121.039832134657 0.9513083898426347 0.95282387616628 0.8700855196356675 1.2417593428681246 0.88310526639548 1.0868595916305732 0.7171307065045062 0.9043498766714935 1.1005874264279563 0.8253133979846264 1.0 11.050555998922137 -8.759620103193585 24.991445515741567 1.0474996175600149 0.9524677345828196 0.0 0.1431751532024706 82.32852125296873 1130945.273389715 0.021224199866608177 0.02347623747927104 1.7393216259121902e-09 8.759620103193585 -0.09503188297719523 LRSGS(ph)DEEER ddPTM_A549_MK2206_60min_R1 1 LRSGSDEEER 10 1 Q9HCC9-5;Q9HCC9-4;Q9HCC9-3;Q9HCC9-2;Q9HCC9 Q9HCC9-5 ZFYVE28 Lateral signaling target protein 2 homolog 1 LRS(0.327)GS(0.673)DEEER 70.41199999999999 0.00087214 3402100.0 723.11 821.41 552.64 745.08 628.62 456.89 552.47 676.05 776.95 989.26 1305.8 True False 845.1532896578677 863.2162604742207 631.0126619854007 927.6246334479125 536.1508307278783 505.2377965409638 652.8466477124873 771.8821578162931 600.9720655342011 765.785478929091 981.5338217533895 0.8610536600237629 0.8794564602289414 0.6428842776483995 0.9450765861443523 0.5462377544668923 0.5147431350235274 0.6651290391056083 0.7864040348985841 0.6122785096295902 0.7801926555736097 1.0 9.938894170798008 -10.895568852831236 1.0977611646142003 1.0031283519085097 0.7079212429499828 0.11054135839068069 0.1467598545780589 0.43922437515269835 0.9233673060186722 0.10086473305784482 0.023078908510040984 1.2718360978385774e-11 10.895568852831236 -0.29520710895852686 LRSS(ph)VPGVR ddPTM_A549_MK2206_60min_R1 2 LRSSVPGVR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 LRS(0.147)S(0.853)VPGVR;LRS(0.003)S(0.997)VPGVR 107.51 0.00029401 316481000.0 6780.200000000001 6899.5 6573.400000000001 7612.8 9538.3 8405.7 7604.400000000001 7306.799999999999 11524.9 12038.8 11286.3 True False 7924.532000025273 7250.655079852795 7505.6069634750165 9477.936341751576 8135.228705309607 9295.185594747923 8986.021047052043 8342.561276136512 8914.528551483518 9319.226718690279 8483.600223966365 0.9341001215071744 0.8546672271719651 0.8847195489329525 1.117206856939839 0.9589358869513205 1.0956652069116612 1.059222595339456 0.9833751067817393 1.0507954543048563 1.0984990419943705 1.0 13.05046092244589 -6.2371202962753785 24.61679280487282 1.0295488194843447 0.8875127520395217 0.6292439599582443 0.051689405913412326 287.1087461563166 290622.90932209906 0.006129017034782691 0.016206940877009565 5.792682213018078e-07 6.2371202962753785 -0.142036067444823 LRSS(ph)VPGVR ddPTM_A549_PD325901_60min_R1 1 LRSSVPGVR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 LRS(0.024)S(0.976)VPGVR 84.884 0.0010944000000000001 61674000.0 5838.9 6795.6 7149.5 7128.5 8675.6 7241.2 7388.8 8121.6 8499.2 7573.4 9719.8 True False 6431.660829629001 7368.289061160273 7634.708063436056 7568.811255001871 8066.255785195204 7182.230068012207 7669.984827306497 7959.608316728058 8142.008180764153 7095.214231515469 8524.326218888751 0.7545066512561793 0.8643837497482374 0.8956377158019339 0.8879072739180737 0.9462631506665565 0.8425569228096127 0.8997760796989269 0.9337521948761939 0.9551497645318368 0.8323489797696193 1.0 13.057370089580866 -2.0000000002126628 0.12345359373676269 1.037732680240281 0.2992840276338521 0.10710359699477867 0.061172286369112615 30.202968874392077 0.245473150288264 0.11697756681468638 3.8767261393933783 0.00999999999510326 2.0000000002126628 -0.738448652606429 LRT(ph)SPALK ddPTM_A549_MK2206_60min_R1 1 LRTSPALK 8 1 H0Y2V6;Q5SW79;Q5SW79-3 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LRT(0.844)S(0.156)PALK 77.062 0.0017965999999999998 18276000.0 3020.5 3026.5 3748.6 3528.6 4372.7 3392.2 2967.2 3004.7 5096.6 5026.1 4720.1 True False 3530.2865558650674 3180.5359227733175 4280.207847275757 4393.107158404875 3729.481622480662 3751.1603524398784 3506.301831941088 3430.6254265078255 3942.2282375977998 3890.700519221951 3547.9689018671875 0.9950162060347219 0.896438500658644 1.206382571454675 1.2382034002871098 1.0511596143128397 1.0572697946889438 0.9882560780326537 0.9669265772601311 1.111122545500082 1.096599385968235 1.0 11.792777649059065 -6.976007954379622 24.998137236425038 1.0420234637107386 1.087519085478406 0.04908406544241717 0.09543440119844752 699.334402622239 728656.7405816608 0.014730958021914393 0.027837836291722907 1.0567981531061641e-07 6.976007954379622 0.045495621767667416 LRT(ph)STSDLSR ddPTM_A549_PD325901_60min_R1 1 LRTSTSDLSR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LRT(0.89)S(0.1)T(0.009)S(0.001)DLSR 130.69 4.5997e-06 40504000.0 5756.3 5794.2 5988.9 5401.3 7085.8 6250.3 6994.4 6595.8 6328.1 7029.9 7662.6 True False 6340.675338435914 6282.49756874667 6395.342768181297 5734.926033757679 6588.117852682948 6199.399629080362 7260.575719482541 6464.241594695 6062.151963560527 6586.0309142697615 6720.148777223493 0.9435319884473803 0.9348747739097462 0.9516668425343414 0.8533927185057247 0.980352975965646 0.9225092828438413 1.08041889549986 0.961919417112336 0.9020859752550263 0.9800424265295591 1.0 12.714277457812932 LRTS(ph)PALK ddPTM_A549_MK2206_60min_R1 1 LRTSPALK 8 1 H0Y2V6;Q5SW79;Q5SW79-3 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LRT(0.391)S(0.609)PALK 63.693999999999996 0.0027245999999999998 19227000.0 4166.1 4573.8 3960.3 3624.8 5687.9 4354.8 4168.4 3791.7 5668.9 5985.6 6160.7 True False 4869.2358286341505 4806.586883720666 4521.930090584798 4512.876162723453 4851.217444715567 4815.622045517711 4925.744323356444 4329.185086594243 4384.903201373107 4633.448802820256 4630.828163329845 1.0514827276883616 1.037954057933439 0.9764841041592995 0.9745289618948898 1.047591764067369 1.0399051477770638 1.0636854034796523 0.934861958574878 0.9468939564840377 1.0005659116248715 1.0 12.177054508447076 -8.26291072013379 24.99557230743199 0.9712169276861812 1.0250523279290826 0.4132821448422459 0.032474845769923794 119.52422106731684 2030507.8316629757 0.005875107747804952 0.007289380384221483 5.4587006651759485e-09 8.26291072013379 0.053835400242901454 LRTS(ph)PALK ddPTM_A549_PD325901_60min_R1 2 LRTSPALK 8 1 H0Y2V6;Q5SW79;Q5SW79-3 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LRT(0.078)S(0.922)PALK;LRT(0.19)S(0.81)PALK 105.2 0.00055831 86996000.0 12657.4 13954.0 14278.4 12989.099999999999 15629.7 14736.2 14335.5 15758.0 14211.599999999999 14452.599999999999 15568.3 True False 13942.369930114604 15129.952551567254 15247.418086994245 13791.407206613556 14531.923791537825 14616.193272971532 14881.045297186607 15443.694328088144 13614.335874170258 13540.060369503854 13653.497795584868 1.0211573721880374 1.1081374734948746 1.1167408026333592 1.010100665272256 1.0643370665234966 1.0705090733378204 1.0899071812937702 1.131116330723851 0.9971317297588553 0.9916916948477703 1.0 13.736982972152951 -8.790594653152185 24.785822457179215 0.9986455122501792 1.0765250036587894 0.5097198625918945 0.03502070065731685 106.91127333275968 90888.13584599564 0.005916318918370453 0.006298881130685035 1.6195909705432568e-09 8.790594653152185 0.07787949140861028 LRTS(ph)TSDLSR ddPTM_A549_MK2206_60min_R1 4 LRTSTSDLSR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LRT(0.003)S(0.995)T(0.003)SDLSR;LRT(0.048)S(0.919)T(0.026)S(0.007)DLSR;LRT(0.401)S(0.528)T(0.052)S(0.019)DLSR;LRTS(0.982)T(0.015)S(0.002)DLSR 161.87 1.8846e-12 159775000.0 12798.699999999999 13145.800000000001 11914.3 11207.9 15262.3 12843.2 11534.7 11682.099999999999 18874.699999999997 18959.8 18809.3 True False 14958.807661827588 13814.865069748375 13603.926893986429 13953.836003141754 13017.235887846558 14202.258899373823 13630.405682424802 13338.073449930802 14599.610586702345 14676.768011847022 14138.431699728933 1.0580245376235318 0.9771143902766273 0.962194901309121 0.986943693578778 0.9206987142779159 1.0045144469344582 0.9640677249009257 0.9433912992051674 1.032618814927136 1.038076098081544 1.0 13.787334478161618 -8.775138977472633 24.981372827747578 1.0154033292731737 0.9755460968941838 0.25406599507785443 0.03460700352258216 250.77640563183107 457292.1697846904 0.005778158572642093 0.006167561453315698 1.6782668742679492e-09 8.775138977472633 -0.03985723237898986 LRTS(ph)TSDLSR ddPTM_A549_PD325901_60min_R1 3 LRTSTSDLSR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LRT(0.059)S(0.93)T(0.011)S(0.001)DLSR;LRT(0.045)S(0.83)T(0.124)S(0.001)DLSR;LRT(0.042)S(0.957)T(0.001)SDLSR 139.7 4.2408e-08 241613000.0 13743.4 13944.099999999999 14832.7 13830.600000000002 15929.099999999999 15008.3 16053.8 15691.5 16035.7 19142.9 17461.9 True False 15138.619850643663 15119.21824382321 15839.33621827093 14684.884750428402 14810.294968411745 14886.077380785997 16664.73614397643 15378.520722756379 15361.775294648873 17934.21402705225 15314.197000104272 0.9885350077800741 0.9872681044732718 1.0342910058008972 0.9589066113181394 0.9670957588119641 0.9720442658981493 1.0881887012334348 1.0042002674153707 1.0031068096188314 1.1710841924607696 1.0 13.902582100757334 LRVEFPR ddPTM_A549_MK2206_60min_R1 2 LRVEFPR 7 1 Q13242;S4R3G0;J3KTL2;Q07955;Q07955-3;Q07955-2 Q13242;J3KTL2 SRSF9;SRSF1 Serine/arginine-rich splicing factor 9;Serine/arginine-rich splicing factor 1 0 ; 68.915 0.022650999999999998 2538400.0 329.42999999999995 397.68 138.94 265.91 513.95 351.23 183.82 161.334 410.03999999999996 425.51 532.64 False True 385.0297302097762 417.92021337138345 158.64378122512227 331.0579619371535 438.3486358254484 388.3969254723952 217.21771459537987 184.20358856465324 317.1665946993293 329.3869954704703 400.3707878838454 0.9616828746294049 1.043832931918673 0.3962421485933874 0.8268784135999433 1.0948566905750903 0.9700930667925651 0.5425413670749588 0.4600824888805173 0.792182157883469 0.8227048661852704 1.0 8.645192904926283 -10.392536896780637 1.0949370040869708 0.9839056359784608 0.7870109752462037 0.02422062612302922 0.22809268560628146 0.8346010949072145 1.959075623094274 0.101316614800389 0.041562648711629804 4.0500753505393025e-11 10.392536896780637 -0.19689466073225714 LRVEFPR ddPTM_A549_PD325901_60min_R1 1 LRVEFPR 7 1 Q13242;S4R3G0;J3KTL2;Q07955;Q07955-3;Q07955-2 Q13242;J3KTL2 SRSF9;SRSF1 Serine/arginine-rich splicing factor 9;Serine/arginine-rich splicing factor 1 0 86.95299999999999 0.013111000000000001 1856500.0 187.5 179.41 159.35 194.28 347.23 228.29 221.58 84.985 267.04 251.4 253.14 False True 206.53486196979537 194.5295103394497 170.16444924939313 206.28023435810664 322.8417626784699 226.43088192930833 230.01234815322852 83.28990750555727 255.81723745661463 235.52656109580755 222.0053847866724 0.9303146505579455 0.8762378017378966 0.766487936375535 0.9291677071541474 1.4542069012816619 1.0199341882940742 1.0360665277297219 0.3751706634755347 1.1523019484524326 1.0609047222981902 1.0 7.794450859642057 -6.530629104216341 24.980266088074096 1.0409650943042827 0.8575844753159788 0.06896580581925582 0.24175967355144592 322.54583764164585 1039600.1461399173 0.034749326658261956 0.07244341872909163 2.946937300180537e-07 6.530629104216341 -0.18338061898830393 LRVQS(ph)PEPPAPER ddPTM_A549_MK2206_60min_R1 6 LRVQSPEPPAPER 13 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER 139.08 1.7412e-09 168290000.0 10787.43 11055.07 9796.76 9355.41 14702.470000000001 10703.1 9313.74 9401.85 15366.5 16586.8 17112.78 True False 12608.084456658007 11617.725842978225 11186.08788077608 11647.48586998032 12539.756139244244 11835.69493785723 11005.925998996694 10734.591029458055 11886.012285258124 12839.830359967093 12863.204437298959 0.9801666853788633 0.9031750913707579 0.8696190700615932 0.9054886693868082 0.9748547650290915 0.920120254291979 0.8556130824666999 0.8345191963467018 0.9240319815482909 0.9981828729034199 1.0 13.650962466221225 -10.085147805955426 0.9658301618929348 0.9921536572184612 0.9061413976432857 0.39868572902350785 0.04276272489033044 0.3878624734009947 0.7257420278779957 0.017732755140782642 0.008616830657287796 8.219628589596863e-11 10.085147805955426 -0.08601225957517544 LRVQS(ph)PEPPAPER ddPTM_A549_PD325901_60min_R1 2 LRVQSPEPPAPER 13 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER 145.69 4.9345e-13 273260000.0 4392.7 4566.4 4090.8999999999996 5426.7 5736.4 5181.299999999999 5032.4 5525.6 5171.0 5094.1 5914.5 True False 4838.643670265173 4951.226553782194 4368.533074580121 5761.894934070089 5333.4950535056705 5139.105210654537 5223.9107358349465 5415.387573250655 4953.68085263689 4772.457656635454 5187.05399510458 0.9328307888893717 0.9545353795150475 0.8421992673882015 1.1108222392726257 1.028232028920327 0.9907560660646108 1.007105524786353 1.0440198961417348 0.9550085380472342 0.9200709422226158 1.0 12.340699672305247 -6.241707704310931 24.998274960166622 0.9964834782300349 0.9143231836207807 0.38623297814489477 0.05327416319118661 718.6646907902539 910483.0212885502 0.006944674630221008 0.018345163589478828 5.731816729222741e-07 6.241707704310931 -0.08216029460925423 LRVTS(ph)AEIK ddPTM_A549_PD325901_60min_R1 2 LRVTSAEIK 9 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 LRVT(0.365)S(0.635)AEIK;LRVT(0.211)S(0.789)AEIK 57.836000000000006 0.0035275999999999997 6301700.0 1651.2399999999998 1775.5700000000002 1436.6599999999999 2136.13 2166.71 1983.46 2003.7800000000002 2077.15 1784.54 2022.58 2237.77 True False 1818.8726692213602 1925.2035152634576 1534.1603869383946 2268.0738985967796 2014.5277643437116 1967.3073593740683 2080.0349444104886 2035.719613757349 1709.541989705015 1894.8739536243372 1962.5384763927946 0.9267959283858238 0.9809761889621854 0.7817224504857749 1.1556837870336016 1.0264908375434632 1.0024299564256387 1.0598696379362997 1.0372890204420673 0.871087120211373 0.9655219382537524 1.0 10.938505223587079 -3.1445978352424437 16.994069779139583 0.9652618156602815 0.56150635209013 0.0 0.09583057787458049 0.0 0.0 0.012928539789692597 0.0 0.0007168068794586195 3.1445978352424437 -0.40375546357015146 LS(ph)AKPAPPKPEPK ddPTM_A549_MK2206_60min_R1 2 LSAKPAPPKPEPK 13 2 A0A087WZE9;Q15651-2;Q15651;P05204 A0A087WZE9;Q15651;P05204 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 1 LS(1)AKPAPPKPEPK;LS(1)AKPAPPKPEPK 96.163 3.4359e-05 13198700.0 3906.2 5765.5 6072.9 4053.7 6290.0 4667.8 4566.8 5811.1 5735.1 5620.9 5253.5 True False 4565.471062579083 6058.93932355842 6934.128537512917 5046.856681977506 5364.749332312616 5161.743497765126 5396.52844638331 6634.841220747371 4436.1090070727805 4351.134786115409 3948.910960776103 1.1561342121732225 1.53433171417155 1.7559597079773386 1.2780375987473815 1.3585389454459238 1.3071308897657845 1.366586509543051 1.680169871301273 1.1233752928683218 1.1018568991133328 1.0 11.947239123239038 -8.91668623728555 7.293627532576852 1.0539228425261205 1.4302016358312917 0.47428776312668586 0.1672027016727547 0.13284655669031936 9.840830601950465 0.02907704152365664 0.03082139905265118 1.2114730647692613e-09 8.91668623728555 0.3762787933051712 LS(ph)AKPAPPKPEPK ddPTM_A549_PD325901_60min_R1 2 LSAKPAPPKPEPK 13 2 A0A087WZE9;Q15651-2;Q15651;P05204 A0A087WZE9;Q15651;P05204 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 1 LS(1)AKPAPPKPEPK;LS(1)AKPAPPKPEPK 83.41799999999999 9.356e-05 31941000.0 10443.2 7390.299999999999 7120.1 7199.1 10979.5 7388.8 7006.0 7574.9 7704.2 8105.7 8433.4 True False 11503.385976122496 8013.1065172601 7603.312802639495 7643.772056657632 10208.337797218732 7328.628062548829 7272.617163830302 7423.812677105903 7380.419266077187 7593.904718672585 7396.145263727274 1.5553218015522567 1.083416594933387 1.0280102041705734 1.0334805204739268 1.3802240806820305 0.9908712986601861 0.9832983134467642 1.0037407882609226 0.9978737576008395 1.0267381788612477 1.0 12.852557844882956 -7.335877262255655 24.99796319436395 0.9975518847343277 1.1881271002157057 0.34493233494758546 0.1456629238999815 123.7920344498102 41571.691324319414 0.020592541289094723 0.032919453362895174 4.614479678363687e-08 7.335877262255655 0.190575215481378 LS(ph)AKPAPPKPEPR ddPTM_A549_PD325901_60min_R1 1 LSAKPAPPKPEPR 13 2 O00479 O00479 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 1 LS(1)AKPAPPKPEPR 52.026 0.0051223 2870300.0 2221.2 1744.7 1673.9 1454.8 2229.1 1946.8 1706.0 1488.1 1942.9 1520.1 1533.5 True False 2446.694588838984 1891.7319920251828 1787.5009199784058 1544.6596919094782 2072.5357059775274 1930.9459062594822 1770.9227635590212 1458.4186781081337 1861.2466696167503 1424.1206265781113 1344.889221657431 1.8192536228550458 1.4066080399498084 1.3291064358263676 1.148540464920859 1.5410456657711558 1.4357657680383513 1.3167796537000642 1.084415470525364 1.3839405057637122 1.0589129600005538 1.0 10.393271627743294 -14.094125333186359 0.08820535857934705 3.398162449835138e-22 1.7280037140497668 0.5002883297587126 0.16213478913429236 77.26595530583695 0.601066086533964 16.35470278011584 1.9334114938888416 8.05146050306206e-15 14.094125333186359 1.7280037140497668 LS(ph)AKPPAK ddPTM_A549_MK2206_60min_R1 1 LSAKPPAK 8 1 P05114;A6NEL0;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 LS(1)AKPPAK 42.336000000000006 0.022352 3692100.0 2455.4 3092.9 3445.9 2617.9 3562.3 3193.8 3001.0 3235.0 3364.3 3371.4 3437.8 True False 2869.8114912335977 3250.3153991559875 3934.580435609967 3259.285617521998 3038.2903889502745 3531.7657961271407 3546.242854426803 3693.5711567719964 2602.2914216831364 2609.7983984610087 2584.099381546795 1.110565449505189 1.2578136206241448 1.522611887029979 1.261284933852292 1.1757637537653869 1.3667298639315837 1.3723322252041585 1.429345629331443 1.0070399924500784 1.0099450574918798 1.0 11.335445840184489 -8.775465185291834 24.731620134545842 1.0033243892441999 1.3148626034893878 0.6124874477880755 0.10851844955748381 92.50728371512068 163116.92952679202 0.018757109186513295 0.02001766235567668 1.6770067656422962e-09 8.775465185291834 0.3115382142451879 LS(ph)AKPPAK ddPTM_A549_PD325901_60min_R1 2 LSAKPPAK 8 1 P05114;A6NEL0;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 LS(1)AKPPAK;LS(1)AKPPAK 48.284 0.009979700000000001 11897100.0 10205.4 8565.900000000001 6932.7 7039.2 11766.1 8838.3 7532.4 8050.1 8587.7 7999.799999999999 8074.2 True False 11241.444695181603 9287.778455028669 7403.194711711751 7473.995396816886 10939.689726841403 8766.32381512903 7819.049603887439 7889.534440318719 8226.788833531195 7494.691262745587 7081.12458657087 1.5875225125258563 1.3116247767540552 1.0454829061688418 1.0554814147728855 1.5449085230880109 1.2379846884425798 1.1042101446309842 1.1141640489253604 1.1617912851205925 1.0584040954397318 1.0 12.7897627843247 -2.000000000000007 0.09983361204910822 0.897755938153424 2.289040409674431 0.35083170730902524 0.1547546719094989 98.9749281325598 0.6785453457336849 1.0506670845753787 18.942936293651822 0.009999999999999837 2.000000000000007 1.3912844715210069 LS(ph)DLT(ph)LQDSQK ddPTM_A549_MK2206_60min_R1 1 LSDLTLQDSQK 11 0 Q9ULL1 Q9ULL1 PLEKHG1 Pleckstrin homology domain-containing family G member 1 2 LS(0.999)DLT(0.986)LQDS(0.015)QK 45.915 0.060998000000000004 2131800.0 2213.1 3032.1 2499.7 2077.4 3245.2 2446.9 2325.2 2867.2 3881.2 3535.9 2792.8 True False 2586.617174899844 3186.420938853784 2854.195047707198 2586.3630932580286 2767.835378890446 2705.8293338792355 2747.6587421236936 3273.634380431738 3002.114397002821 2737.1377342107976 2099.2706826411913 1.232150382648844 1.5178704514868933 1.3596126842090703 1.232029349356703 1.3184747454330672 1.28893779932891 1.3088634852303729 1.5594150899649704 1.4300749407054643 1.3038517409136947 1.0 11.035672486226137 -10.74622450929155 0.9949867600033772 0.9996543288652661 1.3644151114026355 0.1500146319866601 0.13310365426958026 0.28120135559460396 0.4939682003726191 0.07205113061145953 0.01841234020622677 1.7938060759172032e-11 10.74622450929155 0.36476078253736943 LS(ph)DTPAPKR ddPTM_A549_PD325901_60min_R1 1 LSDTPAPKR 9 1 I3NI13;I3L270;J3KNE2;H3BNM4;Q8NBZ0-2;Q8NBZ0 I3NI13 INO80E INO80 complex subunit E 1 LS(0.578)DT(0.422)PAPKR 47.288000000000004 0.014525999999999999 5739300.0 2432.5 2436.9 2267.1 2691.7 2949.9 3179.4 2430.8 2706.1 3111.7 2771.4 3127.1 True False 2679.4456092881455 2642.266115301295 2420.959039179786 2857.960195705764 2742.709200602533 3153.5080205267086 2523.3054241847994 2652.1247126056187 2980.926070228235 2596.4133310299185 2742.486524320152 0.9770132270576484 0.9634563713877496 0.8827605961637055 1.0421054653729747 1.0000811950324666 1.1498718380424664 0.9200794249336607 0.9670511373845552 1.086942832277796 0.9467369513050043 1.0 11.421268816377427 -6.284370758898043 24.692270399177225 1.0328503917352703 0.9433146915283114 0.15367692226223517 0.06642088495912249 623.6023335616218 671487.3958631447 0.008833112949587649 0.02053876187437525 5.195522633525179e-07 6.284370758898043 -0.08953570020695889 LS(ph)DVLK ddPTM_A549_MK2206_60min_R1 1 LSDVLK 6 0 Q14669-3;Q14669;Q14669-2;Q14669-4;Q92797;M0R3C7;A0A087WUE9;Q92797-2 Q14669-3;Q92797 TRIP12;SYMPK E3 ubiquitin-protein ligase TRIP12;Symplekin 1 LS(1)DVLK 74.127 0.046564 2328100.0 414.18 508.59 395.77 326.77 898.02 533.31 291.47 577.32 718.18 626.72 661.81 True False 484.0834582712115 534.4750586364714 451.89613714888935 406.82866466926265 765.922447599901 589.744510217473 344.42632615120976 659.1568779683495 555.5133766977958 485.14351672405644 497.464311973205 0.9731018821251358 1.0743987976071336 0.9083991077800772 0.8178047246355549 1.5396530548329184 1.1855011425407307 0.6923638899543042 1.3250334990942099 1.116689907853566 0.9752328057458478 1.0 8.958449220383644 LS(ph)DVLK ddPTM_A549_PD325901_60min_R1 4 LSDVLK 6 0 Q14669-3;Q14669;Q14669-2;Q14669-4;Q92797;M0R3C7;A0A087WUE9;Q92797-2 Q14669-3;Q92797 TRIP12;SYMPK E3 ubiquitin-protein ligase TRIP12;Symplekin 1 LS(1)DVLK;LS(1)DVLK;LS(1)DVLK;LS(1)DVLK 74.127 0.046564 7671700.0 2262.92 2284.72 2472.59 2173.2200000000003 2384.81 1972.8400000000001 1985.64 2009.6399999999999 2162.72 2228.15 2689.8999999999996 True False 2492.6499725263448 2477.2613726255363 2640.3948262915396 2307.454863659278 2217.3091727478645 1956.7738451330179 2061.204616783901 1969.5561536679172 2071.8283994613903 2087.4642287415413 2359.0593526810067 1.0566287659076978 1.0501055727191417 1.1192574800166868 0.9781249721576181 0.9399124147630932 0.829472070259359 0.8737400415302813 0.8348904623487198 0.8782434393211912 0.8848714324924446 1.0 11.203996001137456 -6.509353860660598 3.165335753620671 0.9190432968517894 1.072354383892745 0.6854888683506966 0.052503683487169786 0.16034184200712495 3.2830126616262914 0.009762128978388821 0.023273308234553956 3.0948965675755707e-07 6.509353860660598 0.15331108704095553 LS(ph)DVLKR ddPTM_A549_MK2206_60min_R1 1 LSDVLKR 7 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 LS(1)DVLKR 68.22399999999999 0.0095907 1587100.0 742.49 645.45 534.98 546.84 893.69 899.11 1060.9 719.57 921.11 902.05 872.6 True False 867.8041598623581 678.3006480601481 610.8482084339712 680.8158245485804 762.2293848639848 994.2532234190855 1253.6517974879698 821.5712510907036 712.4800557104165 698.2762784990668 655.9093374651616 1.3230550478456198 1.0341378134385468 0.931299759803185 1.0379724539060122 1.1620956454282378 1.5158394104610455 1.9113187233053488 1.2525683111415398 1.0862477708640026 1.0645926786126223 1.0 9.357352603049883 -8.828676223601367 4.034388137458531 1.0375420260969626 1.2701034071502775 0.13186909137373082 0.254549890757883 0.3568778258920021 11.182359541831314 0.05019875268499889 0.0535006332060772 1.483623748142094e-09 8.828676223601367 0.23256138105331492 LS(ph)DVLKR ddPTM_A549_PD325901_60min_R1 2 LSDVLKR 7 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 LS(1)DVLKR;LS(1)DVLKR 68.22399999999999 0.0095907 10540000.0 2622.2 2293.8 2640.2 2060.6 2886.6000000000004 1908.83 2456.7 2399.6 2376.0 2515.9 2488.5 True False 2888.403813638385 2487.106576091802 2819.3798488123475 2187.878582037856 2683.8551742293894 1893.2851213505683 2550.1910628578216 2351.738095550217 2276.1449827625706 2357.0456446338203 2182.4302759012185 1.3234804545797643 1.1396041392730265 1.2918533434696353 1.0024964399535687 1.2297552888012018 0.8675123060088369 1.1685097531029893 1.0775776534620718 1.0429405273085544 1.0800095978601176 1.0 11.091719848153295 -2.0000000000028177 0.27429772884745074 1.010788688272565 3.1534859584558848 0.3775118808565089 0.10264268818011933 28.383870482323065 0.35187482689934774 0.034529542794950345 29.436629371378114 0.00999999999993512 2.0000000000028177 2.14269727018332 LS(ph)EDGLHR ddPTM_A549_MK2206_60min_R1 1 LSEDGLHR 8 0 P41212 P41212 ETV6 Transcription factor ETV6 1 LS(1)EDGLHR 54.608000000000004 0.0069469 790750.0 128.06 98.598 97.81200000000001 0.0 0.0 155.33 0.0 0.0 0.0 0.0 0.0 True False 149.67339723359729 103.61621705389179 111.68321238802119 0.0 0.0 171.7669175002908 0.0 0.0 0.0 0.0 0.0 0.0 LS(ph)EGS(ph)QPAEEEEDQETPSR ddPTM_A549_PD325901_60min_R1 2 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 LS(1)EGS(1)QPAEEEEDQETPSR;LS(1)EGS(1)QPAEEEEDQETPSR 65.71600000000001 0.0022299 2589000.0 296.98 310.05 172.06 216.15 340.69 221.07 567.04 364.48 172.6 178.07 213.54 True False 327.12919097487924 336.17900162056975 183.73702628083197 229.50109458773295 316.76110971669453 219.26967921552486 588.6190174961936 357.2101604709715 165.34622223266817 166.82662981038368 187.27593374158974 1.7467764514059996 1.7950998556196867 0.9811032448748013 1.2254702993733677 1.6914138586209013 1.1708374633874807 3.1430574432932312 1.9074002373623902 0.8829016036882721 0.8908065573474979 1.0 7.549021704932492 -8.768258320573494 24.931149524767125 0.9447034759025771 1.6996819663958116 0.2966167900852257 0.5367038725940513 145.96357966948642 533664.9318737412 0.09515953903286199 0.10241297800378628 1.7050679042344208e-09 8.768258320573494 0.7549784904932345 LS(ph)EGSQPAEEEEDQETPSR ddPTM_A549_MK2206_60min_R1 2 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LS(0.997)EGS(0.003)QPAEEEEDQETPSR;LS(0.829)EGS(0.171)QPAEEEEDQETPSR 73.464 0.00053068 8863090.0 173.41 285.3 216.49 375.36 638.35 306.88 248.9 370.89 610.6800000000001 723.31 824.42 True False 202.67736853254806 299.82055138517353 247.19153733573296 467.32321685055075 544.4495606171319 339.35383790954245 294.121908186215 423.46479330298797 472.36195505557134 559.9137686393882 619.6937611655154 0.3270605276892799 0.4838205097002643 0.3988930546449539 0.7541196089688118 0.8785784120097242 0.5476153854950682 0.4746246075368465 0.683345258320075 0.7622506222543801 0.9035330089273556 1.0 9.275411633667789 -9.245760447291184 0.09235979281568965 1.5501089429968795 2.8860953400250796e-15 0.5888012796163029 0.13663365434195063 7.098408071743947 0.3917109933755837 3.5489089908100957 2.752796978730665 5.678577439733086e-10 9.245760447291184 -1.5501089429968766 LS(ph)EGSQPAEEEEDQETPSR ddPTM_A549_PD325901_60min_R1 1 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LS(0.969)EGS(0.031)QPAEEEEDQETPSR 65.71600000000001 0.0019361 10522000.0 0.0 0.0 168.38 0.0 332.97 0.0 233.13 197.85 0.0 229.8 305.96 True False 0.0 0.0 179.80727935119427 0.0 309.5833358841406 0.0 242.00188972363105 193.90372653967756 0.0 215.29038878208672 268.3288596402398 0.0 0.0 0.6701004118314733 0.0 1.1537459530041325 0.0 0.9018854328531547 0.7226346312493287 0.0 0.8023378069386049 1.0 8.067858419254822 -11.050529236739667 1.3454480324142977 1.0009482716837044 0.3578134900640216 0.18802081112229108 0.40782286702285636 0.4893491266536371 1.575807504706663 0.28495696326724973 0.06308936724014048 8.901655099788851e-12 11.050529236739667 -0.6431347816196828 LS(ph)FADR ddPTM_A549_PD325901_60min_R1 1 LSFADR 6 0 A0A087X0I9;Q04759-3;Q04759-2;Q04759 A0A087X0I9 PRKCQ Protein kinase C;Protein kinase C theta type 1 LS(1)FADR 69.423 0.052128 14420000.0 1809.8 1651.5 1931.2 1645.3 1671.5 1577.8 1616.9 1502.7 1836.8 1601.7 1509.5 True False 1993.5295636956578 1790.6777009397545 2062.262845248998 1746.9264442525885 1554.0996063619561 1564.9509199179233 1678.4320143016307 1472.727469654655 1759.6056836440612 1500.5683886521688 1323.8410695088962 1.50586774319911 1.3526379730793818 1.557787330177053 1.3195892501662936 1.1739321601032355 1.1821290001967315 1.2678500863583848 1.1124654640008946 1.3291668646424604 1.1334958728911717 1.0 10.3705142179899 -2.000000208270339 0.031374317550020216 9.931603365987268e-09 3.228158361152565 0.5981635413891374 0.1019346474391436 538.5320538940083 1.259086459626309 40.0363337695188 103.54629472591182 0.009999995204399367 2.000000208270339 3.2281583512209613 LS(ph)FSDSESDNSADSSLPSREPPPPQKPPPPNSK ddPTM_A549_PD325901_60min_R1 1 LSFSDSESDNSADSSLPSREPPPPQKPPPPNSK 33 2 Q03111 Q03111 MLLT1 Protein ENL 1 LS(0.452)FS(0.4)DS(0.066)ES(0.07)DNS(0.011)ADSSLPSREPPPPQKPPPPNSK 65.05199999999999 0.00017898 3382200.0 856.94 814.24 759.18 657.69 824.34 1093.5 656.22 1003.3 732.1 1106.5 962.87 True False 943.9359179541143 882.8588623755289 810.7025201202019 698.3140175776359 766.4412022186153 1084.594898548769 681.1928111973627 983.2883944263758 701.3323829463288 1036.635401163528 844.4430941358274 1.1178206376595503 1.0454924298706176 0.9600439931951195 0.8269521326268471 0.9076291908135783 1.2843907494544724 0.8066769873871381 1.1644223290530165 0.8305265183843407 1.2275965169972565 1.0 9.721856394833113 LS(ph)GEAR ddPTM_A549_MK2206_60min_R1 1 LSGEAR 6 0 H0YLG1;H0YLD2;H0YM70;A0A087X1Z3;Q9UL46 H0YLG1 PSME2 Proteasome activator complex subunit 2 1 LS(1)GEAR 66.07300000000001 0.056491 4854300.0 1603.1 1463.0 1212.7 847.6 587.93 605.84 585.16 722.96 473.32 1873.7 2292.8 True False 1873.6640879679815 1537.460451021762 1384.6790952332367 1055.2620380502103 501.44627582616135 669.949586675956 691.4759975662738 825.4417939721427 366.1137757367245 1450.4298686588336 1723.4344819391727 1.0871687363825828 0.8920910351589597 0.8034416798225045 0.6123018014951467 0.2909575507981855 0.3887293620365206 0.40121977644792123 0.47895165300590525 0.21243266255458745 0.8415926940412843 1.0 10.751070738935528 -5.923366472261821 1.7518420914645472 0.5516314229002117 1.0372276570966181 0.4114821378742175 0.22087741244167555 0.44116144908275284 2.48738834437542 0.044210242565175605 0.23180606122594583 1.1929810021961582e-06 5.923366472261821 0.4855962341964064 LS(ph)GEAR ddPTM_A549_PD325901_60min_R1 2 LSGEAR 6 0 H0YLG1;H0YLD2;H0YM70;A0A087X1Z3;Q9UL46 H0YLG1 PSME2 Proteasome activator complex subunit 2 1 LS(1)GEAR;LS(1)GEAR 75.21300000000001 0.045926 17066400.0 3403.9 3437.6000000000004 2918.8 2254.92 2776.2 2385.8 1878.82 2019.5100000000002 2441.8 3046.9 3423.3999999999996 True False 3749.4614221812603 3727.2986162582492 3116.887320170247 2394.201287105115 2581.2092893700637 2366.370835809468 1950.3195232297542 1979.229288775054 2339.179637588234 2854.518214012792 3002.343502720607 1.2488449169069575 1.2414630813831649 1.038151469792129 0.7974441581836266 0.8597315020853118 0.7881745821772742 0.649599062020202 0.6592281286207103 0.7791179242043959 0.9507633658261084 1.0 11.551873332014102 -5.966960142720129 2.676183668751086 0.8437087182458559 1.251338867510358 0.7225756205350643 0.10398433147648857 0.14383483469806577 2.050525375303845 0.01868629775972406 0.06980243457189876 1.0790457468701632e-06 5.966960142720129 0.40763014926450214 LS(ph)GPAELR ddPTM_A549_MK2206_60min_R1 2 LSGPAELR 8 0 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8;Q96RT6 Q96PC5 MIA2;CTAGE1 Melanoma inhibitory activity protein 2;cTAGE family member 2 1 LS(1)GPAELR;LS(1)GPAELR 74.464 0.0050203999999999995 37116000.0 670.49 1018.86 641.1099999999999 662.0999999999999 877.8199999999999 652.77 543.0 882.11 1284.53 999.17 1131.4499999999998 True False 783.6523200933516 1070.7156220970821 732.0290382988203 824.3145297227987 748.6938408411224 721.8456881263431 641.6560712941533 1007.1517938485774 993.5860059729032 773.4568030462974 850.4797385685961 0.9214238559195793 1.258954885743845 0.8607248416415718 0.9692347652045952 0.880319432537235 0.848751187584138 0.754463677611057 1.1842160937821622 1.1682653459154275 0.9094358959662784 1.0 9.732133055981082 -8.283042715148683 24.952221538840554 1.089535609305511 0.9346000961016637 0.17835330761892754 0.1383071825124592 894.195858202652 1032808.5014155903 0.02246988965604194 0.02717754636082438 5.211434513822329e-09 8.283042715148683 -0.15493551320384735 LS(ph)GPAELR ddPTM_A549_PD325901_60min_R1 2 LSGPAELR 8 0 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8;Q96RT6 Q96PC5 MIA2;CTAGE1 Melanoma inhibitory activity protein 2;cTAGE family member 2 1 LS(1)GPAELR;LS(1)GPAELR 78.556 0.0042587 47411000.0 3079.5 3262.8 2969.8999999999996 2259.63 3235.7 3374.0 3368.6 2906.3 3410.7 3056.2 3398.5 True False 3392.12857299192 3537.767606797597 3171.4552734595054 2399.202213107929 3008.43559455901 3346.5232626461366 3496.7939163686515 2848.331566551757 3267.3601400287444 2863.231010425643 2980.5060448665026 1.13810491303461 1.1869687742760657 1.064066043053959 0.8049647197462367 1.00937074083128 1.1228037159696578 1.1732215481969517 0.9556536788300103 1.096243420024699 0.9606526433177852 1.0 11.541341583953072 -11.071147952553861 0.006622965807304773 1.204331958159081e-07 2.0653731144576146 0.06331853991940828 0.10533051874406948 30802.069845075406 40.29369097597574 6520.834168304383 6050.190746004372 8.488912311550193e-12 11.071147952553861 2.0653729940244188 LS(ph)GPSLKMPSLEISAPK ddPTM_A549_MK2206_60min_R1 1 LSGPSLKMPSLEISAPK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LS(0.515)GPS(0.434)LKMPS(0.051)LEISAPK 43.023999999999994 0.015764 1981600.0 1363.5 2005.4 1925.2 1788.8 2291.8 1844.0 1491.7 1682.4 2774.5 2836.9 2845.5 True False 1593.6254656255655 2107.4662942440464 2198.222309015441 2227.056080302282 1954.6792559291016 2039.1308560518662 1762.7225811224464 1920.8853521339138 2146.0801799660735 2196.042319687381 2138.8838181951846 0.7450734126224235 0.9853112526805459 1.0277427368029401 1.0412234929999604 0.9138781823028064 0.9533621409004388 0.8241319917085784 0.8980783976171176 1.0033645407523637 1.026723518596923 1.0 11.062642403693378 -8.777850615473449 24.281380820829288 1.0015888261612917 0.9304018234289397 0.17734598786273736 0.08140475935349148 254.20772946681143 376113.46316459996 0.014127646055822441 0.015063162720272364 1.6678207951904925e-09 8.777850615473449 -0.07118700273235201 LS(ph)GSRQDLIPSYSLGSNK ddPTM_A549_MK2206_60min_R1 2 LSGSRQDLIPSYSLGSNK 18 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 LS(0.523)GS(0.476)RQDLIPSYSLGSNK;LS(0.599)GS(0.401)RQDLIPSYSLGSNK 136.56 1.8059000000000002e-13 63506000.0 2743.8 3119.29 3645.1 3281.0 3702.6000000000004 3029.1000000000004 3165.31 2667.58 4275.9 5342.299999999999 4902.9 True False 3206.8863605305637 3278.048537435183 4162.029990957922 4084.845147289689 3157.9524448045618 3349.637351446152 3740.405854563712 3045.717634121125 3307.4154772092015 4135.470719611514 3685.374616843848 0.8701656395726031 0.889474986464877 1.129337020973537 1.108393466601761 0.8568877721063347 0.9089000982795011 1.014932332107663 0.8264336602853891 0.897443495185754 1.1221303529661601 1.0 11.84759556080557 -6.7774544968256585 24.999927579709873 0.9370329088510223 1.000780434797891 0.04952229701228439 0.10568605903736762 467.56511876238494 729878.2530773794 0.013861638455009914 0.02625404306468368 1.66934270331496e-07 6.7774544968256585 0.06374752594686872 LS(ph)GSRQDLIPSYSLGSNK ddPTM_A549_PD325901_60min_R1 5 LSGSRQDLIPSYSLGSNK 18 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 LS(0.538)GS(0.462)RQDLIPSYSLGSNK;LS(0.5)GS(0.5)RQDLIPSYSLGSNK;LS(0.5)GS(0.5)RQDLIPSYSLGSNK;LS(0.545)GS(0.455)RQDLIPSYSLGSNK;LS(0.625)GS(0.375)RQDLIPSYSLGSNK 171.29 7.4438e-31 135427500.0 14132.1 13234.8 14704.4 14745.279999999999 16785.9 16795.0 15726.899999999998 17417.100000000002 17861.7 15895.499999999998 18329.5 True False 15566.780388497837 14350.143043534637 15702.329008740353 15656.062456639389 15606.916292211285 16658.227088364507 16325.395785589897 17069.702277049382 17111.034864734935 14891.85541725699 16075.087700273803 0.9683791888882006 0.8926945414605866 0.976811405419138 0.9739332530280829 0.9708759655442163 1.0362759693112449 1.0155711800758531 1.0618730420213283 1.0644442620641805 0.9263934166283484 1.0 13.97253898798323 -6.8706760945305065 1.1011079052410429 1.0336804692186523 0.938520895858079 0.3083931699204727 0.04224282795678674 0.25673289408611516 0.6082181942766149 0.005105188742302024 0.014464635307400425 1.3468644979068443e-07 6.8706760945305065 -0.09515957336057335 LS(ph)ISDD ddPTM_A549_PD325901_60min_R1 2 LSISDD 6 0 P47974;Q07352 P47974;Q07352 ZFP36L2;ZFP36L1 Zinc finger protein 36, C3H1 type-like 2;Zinc finger protein 36, C3H1 type-like 1 1 LS(0.978)IS(0.022)DD;LS(0.978)IS(0.022)DD 47.849 0.04024 26504000.0 1411.31 1692.6100000000001 1391.8 1214.9099999999999 1492.58 1463.8000000000002 1300.67 1335.23 1596.88 1992.79 2195.52 True False 1554.5851522484902 1835.252184915311 1486.255917573299 1289.9522314391975 1387.746329921465 1451.8792981213426 1350.1677086039335 1308.5977901823285 1529.7686868997862 1866.96489930833 1925.4849585479776 0.8073733037212684 0.9531376377509011 0.7718865374539698 0.6699362805783536 0.7207256144799878 0.7540330510897449 0.7012091694666391 0.6796198455734246 0.7944848803458824 0.9696076258711581 1.0 10.911006137834379 -10.225804569556306 0.8125355996458609 0.9909840243785495 0.7597223585417655 0.5652356263928289 0.07507781575654615 0.34635907672954686 0.44249150643604496 0.04338560421135365 0.016382515952807666 5.945596474298477e-11 10.225804569556306 -0.23126166583678398 LS(ph)KGEMK ddPTM_A549_MK2206_60min_R1 1 LSKGEMK 7 1 Q5RHS7;P29034 Q5RHS7 S100A2 Protein S100-A2 1 LS(1)KGEMK 49.418 0.012437 39861000.0 6956.8 8885.8 7757.5 7244.1 10918.0 8675.4 8007.5 8816.0 12137.0 11774.0 10753.0 True False 8130.937762569806 9338.049265679536 8857.630148653274 9018.90482520001 9311.976662987143 9593.425069735551 9462.359099241121 10065.694997867677 9387.988878806353 9114.24522260186 8082.7333322975965 1.005963877353171 1.1553083445628292 1.0958706398563574 1.115823627282319 1.1520826285060826 1.1869035727556938 1.1706880222598353 1.2453330555452586 1.1614868996473158 1.1276191911692137 1.0 12.980627535326432 -10.635273611439333 0.9898140725198363 1.0029126973786247 1.1460906443578707 0.07204130180765611 0.06746648698633206 0.37062088565987217 0.666068929644783 0.03549329393288805 0.010377225116212677 2.315935119582941e-11 10.635273611439333 0.14317794697924602 LS(ph)LDLSHR ddPTM_A549_MK2206_60min_R1 2 LSLDLSHR 8 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 LS(1)LDLSHR;LS(1)LDLSHR 98.055 0.00075141 7179800.0 263.22 395.70000000000005 159.56 350.94 406.22 338.788 441.59000000000003 470.65 634.13 474.63 448.1 True False 307.6451008888606 415.8394398286473 182.1880072857386 436.92031575429525 346.4655761163801 374.6383212907263 521.8211869664549 537.3660788051748 490.5005674975264 367.41075335514904 336.8244030691484 0.9133693939203763 1.2345882187855537 0.5408990727086253 1.2971753583560799 1.0286237367583262 1.1122659696774253 1.5492380665165986 1.5953893895712068 1.4562500906349978 1.0908079996796474 1.0 8.395852855825888 -7.532250178126601 24.390730304017488 1.2805060446427046 1.0128759488517758 0.28209083224916387 0.24859927289773529 206.32651007588365 536997.405044262 0.04250991319452781 0.06310356515758062 2.9359578873281265e-08 7.532250178126601 -0.2676300957909288 LS(ph)LDLSHR ddPTM_A549_PD325901_60min_R1 3 LSLDLSHR 8 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 LS(1)LDLSHR;LS(0.999)LDLS(0.001)HR;LS(1)LDLSHR 104.05 0.0006432 11837500.0 334.06 584.62 661.41 445.317 682.08 482.32 608.28 628.05 513.59 744.1800000000001 676.3199999999999 True False 367.97352527802605 633.8879791240684 706.2972599814309 472.82321970171364 634.1730538482577 478.3921458326866 631.4284282635876 615.523050054306 492.0055983573351 697.1923477974465 593.136927545715 0.6203854593923679 1.0687042901661397 1.190782814524719 0.7971569425936166 1.0691849122804447 0.8065458810871547 1.0645576070879879 1.0377419133238264 0.8294974996636246 1.1754323755937646 1.0 9.212221383732343 -8.747344986363123 24.966130779440196 0.9194849163769362 0.9654037080474012 0.0 0.17580244941070938 1007.5077040957428 1784650.288000496 0.026047155249641518 0.02946445827277028 1.7891840323449824e-09 8.747344986363123 0.045918791670464976 LS(ph)LITAPR ddPTM_A549_PD325901_60min_R1 1 LSLITAPR 8 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 LS(1)LITAPR 71.34899999999999 0.0061679 1604100.0 339.36 346.98 367.21 146.29 279.05 194.23 457.53 375.91 288.86 304.05 423.1 True False 373.811577376372 376.2212223264159 392.13107881311333 155.3260010513044 259.45049067023865 192.64825527675123 474.9415545200226 368.41218015430974 276.7202187377087 284.8522311105023 371.06138225188084 1.0074116985922945 1.0139056240323938 1.0567822402680809 0.41859920886584545 0.6992117829554158 0.5191816354146477 1.2799541456934116 0.9928604747778016 0.7457532148949625 0.7676687597663862 1.0 8.535514051945263 -11.092574844129818 1.4096342568670621 1.0003582796194272 0.8438146743931343 0.0 0.24878676098398975 1.2137868535396719 4.293059605730524 0.17910242087208184 0.03877611700780466 8.080256660278636e-12 11.092574844129818 -0.15654360522629296 LS(ph)LRDTTEGGTQIGPPEIR ddPTM_A549_PD325901_60min_R1 2 LSLRDTTEGGTQIGPPEIR 19 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 LS(0.999)LRDT(0.001)TEGGTQIGPPEIR;LS(0.985)LRDT(0.013)T(0.002)EGGTQIGPPEIR 160.36 3.3356e-27 21939000.0 2910.1000000000004 3076.3 2446.9 3096.8 3208.8 3673.8 3283.1 3056.5 2985.1 3083.5 3426.9 True False 3205.531209697609 3335.550597275791 2612.9613484050205 3288.082302656913 2983.424957759045 3643.881790844508 3408.040167081254 2995.5357097221354 2859.6466279648776 2888.8072837665986 3005.4130249089358 1.0665859178522517 1.1098476547584866 0.8694183883375541 1.0940533881384047 0.9926838451262262 1.21243960834798 1.1339673245691473 0.9967134915883651 0.9514987139085568 0.9612014255026161 1.0 11.553347554480998 -8.48118412815655 13.051386279902943 0.976938543759922 1.0659411992982215 0.22428823492396965 0.08214309029425233 2.6672772205006154 833.8333823658686 0.013509070324014185 0.01630829330703521 3.3022950370319373e-09 8.48118412815655 0.08900265553829956 LS(ph)NGLAR ddPTM_A549_MK2206_60min_R1 2 LSNGLAR 7 0 Q16643;Q16643-3;Q16643-2;D6R9W4;D6RCR4 Q16643 DBN1 Drebrin 1 LS(1)NGLAR;LS(1)NGLAR 72.643 0.019608 5179400.0 1340.3200000000002 1680.47 1340.54 1341.0 1792.8600000000001 1487.87 1473.24 1564.9099999999999 1801.87 2147.8999999999996 2278.3 True False 1566.5332483221543 1765.9987451322888 1530.64872954891 1669.545060199778 1529.1326689872812 1645.315415831827 1740.9086380725566 1786.740784835879 1393.7493219951239 1662.6878982186631 1712.5352321188145 0.9147451211172918 1.0312189273603014 0.8937910886978556 0.9748967664356619 0.8929058160721046 0.9607483600767615 1.016568071372545 1.0433308181492151 0.8138514734501103 0.9708926666352561 1.0 10.74191795371641 -8.747610414442613 24.999766247954287 0.9120965155881544 0.9651581100475294 0.04721166729646109 0.06531289295133831 457.9712617505384 827912.1731142536 0.013467032001785695 0.015232500739184321 1.7880908695061503e-09 8.747610414442613 0.05306159445937497 LS(ph)NGLAR ddPTM_A549_PD325901_60min_R1 1 LSNGLAR 7 0 Q16643;Q16643-3;Q16643-2;D6R9W4;D6RCR4 Q16643 DBN1 Drebrin 1 LS(1)NGLAR 67.207 0.023694999999999997 6296600.0 1562.3 1815.5 1545.2 1366.3 1962.0 1704.6 1548.9 1603.3 1614.6 1972.4 1880.8 True False 1720.9035458955261 1968.4985564978042 1650.0665640424365 1450.693247907562 1824.1958885325514 1690.718302758329 1607.8442370906014 1571.3209237354822 1546.7439769227465 1847.862327388111 1649.4735233735219 1.0433047402761062 1.1934102176261725 1.0003595333059374 0.8794886534102031 1.105926141088755 1.0250048144455528 0.9747620766911251 0.9526196701368076 0.9377197966532547 1.1202740154378725 1.0 10.687789905241933 -5.892165918331606 7.052271575689121 0.9764585264856899 1.1170142442832949 0.22921792139487374 0.07577729948569042 0.13868837974121914 8.15367049626841 0.008273841880820074 0.026104910125575913 1.2818407732687514e-06 5.892165918331606 0.140555717797605 LS(ph)NGSFSAPSLTNSR ddPTM_A549_MK2206_60min_R1 4 LSNGSFSAPSLTNSR 15 0 O94806;O94806-2 O94806 PRKD3 Serine/threonine-protein kinase D3 1 LS(0.945)NGS(0.05)FS(0.005)APSLTNSR;LS(0.996)NGS(0.003)FSAPSLTNSR;LS(0.968)NGS(0.031)FS(0.001)APSLTNSR;LS(0.998)NGS(0.001)FSAPSLTNSR 116.35 9.4277e-07 12253200.0 6354.0 7146.0 7271.9 7471.5 9298.2 7072.2 7632.5 7440.6 11482.8 10807.5 11852.7 True False 7426.399859614845 7509.700876966168 8303.164766740796 9302.017835408382 7930.447097251059 7820.575509853581 9019.226453319752 8495.327835881828 8881.964134263624 8366.078243865268 8909.347472121613 0.8335514899214466 0.8429013348581248 0.9319610434683759 1.044073975621164 0.8901265914329138 0.8777944214573596 1.0123329998680557 0.9535297464224736 0.9969264485481485 0.9390225569317733 1.0 13.121104056116607 -2.5252893948702715 0.2839039838205148 1.0008834961834263 1.163053167996037e-14 0.3786090153944299 0.05327362427323353 20.582463806630987 0.33660504407495234 0.01863341842331249 9.87203216931562 0.0029833939530129407 2.5252893948702715 -1.0008834961834148 LS(ph)NGSFSAPSLTNSR ddPTM_A549_PD325901_60min_R1 2 LSNGSFSAPSLTNSR 15 0 O94806;O94806-2 O94806 PRKD3 Serine/threonine-protein kinase D3 1 LS(0.979)NGS(0.021)FS(0.001)APSLTNSR;LS(0.998)NGS(0.002)FSAPSLTNSR 144.25 8.006099999999999e-22 12054000.0 6033.2 5904.0 5948.0 6699.2 7642.2 6580.2 5557.8 6707.5 7149.0 6681.6 6306.9 True False 6645.686022592908 6401.550800089802 6351.667048229623 7112.994369012906 7105.438236158747 6526.613032858355 5769.3051203448595 6573.713650568043 6848.552391317174 6259.722635711007 5531.191282733131 1.2014927133941156 1.157354803489385 1.1483361763419382 1.28597873503629 1.2846126400184323 1.1799651646893246 1.0430492863906289 1.1884806209992018 1.2381695083835709 1.1317132812333126 1.0 12.433374519660907 -7.533681765825915 24.006300400435926 1.1172420745374174 1.2144786408799413 0.2854791345867794 0.0719821306661819 179.3066348165632 398450.5969273206 0.015185906795144092 0.022539006892617328 2.926295868677356e-08 7.533681765825915 0.09723656634252387 LS(ph)PAALHNGLLAR ddPTM_A549_MK2206_60min_R1 2 LSPAALHNGLLAR 13 0 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 LS(1)PAALHNGLLAR;LS(1)PAALHNGLLAR 87.447 5.965e-05 2897900.0 384.04999999999995 386.1 191.01 377.83000000000004 418.88 440.43 471.8 324.772 491.59 475.1 479.98 True False 448.8682508789863 405.7508408335627 218.09809019584432 470.39836696143306 357.2633068869806 487.0360102662271 557.5199529218813 370.8094255725362 380.2456499079192 367.7745800287195 360.7877192259093 1.2441339517932009 1.1246248672325219 0.6045053048473663 1.303809253737072 0.990231340616331 1.349924025438534 1.5452852833186015 1.0277772934403895 1.0539317987978027 1.0193655726913347 1.0 8.49500642162352 -8.44777708035663 24.99996192880704 1.0262664833430286 1.1583462112617906 0.08304642818129082 0.22413173754790403 289.0465109502822 96217.24931439737 0.03712652733016828 0.044883777639283355 3.5663414370936444e-09 8.44777708035663 0.132079727918762 LS(ph)PAALHNGLLAR ddPTM_A549_PD325901_60min_R1 2 LSPAALHNGLLAR 13 0 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 LS(1)PAALHNGLLAR;LS(1)PAALHNGLLAR 90.70700000000001 5.6572e-05 6346100.0 788.73 485.09999999999997 531.54 521.11 638.4300000000001 737.28 404.90999999999997 644.73 453.92 576.61 695.75 True False 868.8012889676628 525.9810794585983 567.6135008096793 553.2977811733215 593.5888792639333 731.2758361244046 420.31907162525397 631.8703543690996 434.84332094932046 540.2027461951219 610.1771607226327 1.4238508828136758 0.8620137122728078 0.9302437674616577 0.906782188500879 0.9728139915314858 1.1984647790788412 0.6888475981753728 1.0355522871763598 0.7126509298288641 0.8853211509184642 1.0 9.253084369807882 -7.760931152025866 24.999996311840892 0.8644652060307041 1.025198236039423 0.206752982034641 0.17666658830878726 20.18012617883925 992634.8627289878 0.02799212401603297 0.04013652656236372 1.7340788765747085e-08 7.760931152025866 0.16073303000871886 LS(ph)PANQR ddPTM_A549_MK2206_60min_R1 2 LSPANQR 7 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LS(1)PANQR;LS(1)PANQR 93.098 0.012192 114657000.0 4589.6 4709.1 3948.6 3963.2 5433.6 4317.7 3492.49 4236.2 5704.4 6345.0 6561.0 True False 5364.212275053244 4948.773075807644 4508.57085465322 4934.184177914806 4634.324637846397 4774.596148142701 4127.030225477198 4836.694322818404 4412.362508054955 4911.660093206116 4931.722625611876 1.0876954529428162 1.0034573011278494 0.9141979784586616 1.0004991262667828 0.9396969354640904 0.9681396361074383 0.8368334026014206 0.9807312150322562 0.8946899172999446 0.995931942258559 1.0 12.267875945329994 -5.412146245832016 2.8237979048842643 0.9458544538009896 1.0936209872187448 0.4203775025097837 0.04859699230263281 0.24020120630758293 3.0578776987344742 0.006959881001618867 0.06777140867942374 3.871272603917336e-06 5.412146245832016 0.14776653341775514 LS(ph)PANQR ddPTM_A549_PD325901_60min_R1 2 LSPANQR 7 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LS(1)PANQR;LS(1)PANQR 74.173 0.018705 142247000.0 12317.8 11418.099999999999 11250.1 11614.3 13673.7 11822.0 11153.3 11277.6 11610.4 11189.3 13301.5 True False 13568.293988114901 12380.343358825428 12013.599438347012 12331.688933010904 12713.306483704153 11725.725551571608 11577.744934819944 11052.659420893948 11122.455264253596 10482.805688422111 11665.499825155739 1.1631129562795017 1.0612784316474966 1.029840094158728 1.0571076351498099 1.0898209827485403 1.0051627214708792 0.9924773998841817 0.9474655682613574 0.9534486675203484 0.8986160769396918 1.0 13.509960502544523 -7.444362821694555 2.6032945384359807 0.9756299584557538 1.0754776903184047 0.6537726080661679 0.04133877621718224 0.14119668870274293 1.8803651605400014 0.005582488921703772 0.009231549815758433 3.594489160577308e-08 7.444362821694555 0.09984773186265083 LS(ph)PDFAEELR ddPTM_A549_MK2206_60min_R1 2 LSPDFAEELR 10 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LS(1)PDFAEELR;LS(1)PDFAEELR 69.01 0.0038138000000000004 4372700.0 562.26 415.20000000000005 465.21 565.64 763.15 691.04 727.9200000000001 359.88 701.0699999999999 690.5699999999999 652.45 True False 657.1557420628014 436.33190653741303 531.183773310344 704.2218253925447 650.8916459386918 764.1653941247731 860.173641650902 410.8940920862769 542.2787643787403 534.5697573783056 490.42865829606313 1.3399619515425791 0.8896949620631818 1.0831010062827073 1.4359312276718919 1.3271892556200497 1.5581581157589284 1.7539220579797976 0.8378264302781168 1.1057240542647413 1.090005138026814 1.0 8.937899475437963 -8.29931291670254 24.99993078500603 1.0354128230799011 1.3253061174421081 0.33628299311695276 0.22300164508718504 583.9546354725823 385461.0158828194 0.0387513198823885 0.04684855601792654 5.019807733417874e-09 8.29931291670254 0.289893294362207 LS(ph)PDFAEELR ddPTM_A549_PD325901_60min_R1 2 LSPDFAEELR 10 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0 A0A0G2JMS7 SCRIB Protein scribble homolog 1 LS(1)PDFAEELR;LS(1)PDFAEELR 112.13 0.00014223 6329900.0 1254.5700000000002 1076.27 1068.31 1211.03 1479.12 748.4000000000001 921.5 1130.49 957.46 740.27 1012.6099999999999 True False 1381.9330228343795 1166.971050069894 1140.8119408699038 1285.8325726513167 1375.231713886986 742.3052785312294 956.568186764149 1107.9414900977513 917.2212858568391 693.5292258647315 888.0653894636658 1.5561162941717364 1.3140598247778457 1.2846035375377938 1.4479030349644373 1.548570330747308 0.8358678170979436 1.0771371096241622 1.2475899897043352 1.0328307991045362 0.7809438742833773 1.0 9.79452209786113 -7.2558920512684715 24.999764513861322 1.029113879278833 1.4166847525337938 0.7017499522399596 0.14000610518058476 187.14495775312756 843392.5382880619 0.017453888206035686 0.029689827249647135 5.547635884919509e-08 7.2558920512684715 0.38757087325496076 LS(ph)PDQR ddPTM_A549_MK2206_60min_R1 1 LSPDQR 6 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LS(1)PDQR 74.301 0.046462 7334600.0 1722.1 1886.4 1645.2 1175.3 2502.1 2226.1 1199.3 1718.8 2696.4 2019.2 2051.8 True False 2012.7483786973116 1982.4097025341434 1878.5140986869972 1463.2485527612218 2134.044404511827 2461.664424434413 1417.197286009352 1962.4451636042377 2085.669705266001 1563.0613176046948 1542.281433200801 1.305046105962722 1.285374808941267 1.2180099288288713 0.9487558633993558 1.3836932472712844 1.59611882205283 0.9188966783242319 1.2724299997124664 1.3523275715881955 1.0134734711554996 1.0 10.590850334763099 -10.926444946290776 1.1401680625991348 0.9976609714859613 1.2577258702060006 0.2182624302395686 0.17959939825671706 0.6266304385117042 1.425817704957731 0.13044929858566037 0.029625257947959137 1.1845545185405418e-11 10.926444946290776 0.26006489872003924 LS(ph)PDQR ddPTM_A549_PD325901_60min_R1 1 LSPDQR 6 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LS(1)PDQR 84.568 0.04043 8738700.0 2072.9 1900.5 2015.2 1941.0 2027.2 2026.9 1693.9 1957.4 1790.9 2013.9 2028.9 True False 2283.3392820116733 2060.6618048053297 2151.963590382032 2060.891161669163 1884.8164654603409 2010.3935984165528 1758.3622914376454 1918.3581214494052 1715.6347010225113 1886.742010305676 1779.3581622567724 1.2832375911973215 1.1580927598026571 1.209404399872301 1.158221658452012 1.05926760864705 1.129842007674698 0.9882003121886952 1.0781180327497069 0.9641873892586975 1.0603497656215026 1.0 10.797141220732986 -6.727792950998749 0.49667567184115463 0.9814466332969403 1.2740610672807389 0.7292219162471862 0.049076838770502874 0.4038430193038613 0.1482512128372949 0.009462319491220289 0.053958485129760224 1.871574196855875e-07 6.727792950998749 0.2926144339837986 LS(ph)PENNQVLTK ddPTM_A549_MK2206_60min_R1 2 LSPENNQVLTK 11 0 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 LS(1)PENNQVLTK;LS(1)PENNQVLTK 191.01 4.2242e-19 19621300.0 11246.3 12177.8 11542.1 10486.0 16014.300000000001 13458.9 11329.2 12940.099999999999 18577.0 15408.8 15419.8 True False 13144.400494363616 12797.598004410665 13178.94333725698 13055.070470734432 13658.617684014942 14883.111864705224 13387.568992459897 14774.398802394231 14369.339161373136 11927.941378123625 11590.638095169945 1.1340532235098562 1.1041323091386734 1.1370334600257181 1.126346139318658 1.1784180967315998 1.2840632019135616 1.1550329569895526 1.2746838164631353 1.2397366774277192 1.029101355782495 1.0 13.500672372243855 -10.852650969161804 1.1197560257804873 1.0008181561412857 1.1848756739933983 0.5474027793793128 0.058294781429805646 0.3059664511971319 0.6858945936380307 0.04322710936985414 0.010740058986478888 1.4039415615014521e-11 10.852650969161804 0.18405751785211266 LS(ph)PENNQVLTK ddPTM_A549_PD325901_60min_R1 2 LSPENNQVLTK 11 0 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 LS(1)PENNQVLTK;LS(1)PENNQVLTK 177.63 1.4254e-15 30601000.0 14232.8 14491.099999999999 14666.099999999999 13636.4 17249.7 13390.0 14187.199999999999 14139.7 15013.5 16468.9 15540.0 True False 15677.70337836641 15712.315853519867 15661.429740423753 14478.689457488603 16038.140580234425 13280.95627944035 14727.101659533726 13857.672591119932 14382.534805852625 15429.050843399946 13628.678516176382 1.1503465548591498 1.1528862343381523 1.149152481793053 1.0623692854962652 1.1767935211912266 0.9744859902357146 1.0805964526974192 1.0168023682319418 1.0553139681724433 1.1321017533054754 1.0 13.734358059771347 -5.29517016289448 0.24472190632183097 1.0060098409966722 1.3025694936038381 0.2638427490683092 0.05733367443498917 5.008482340587579 0.2352671210877828 0.02595265209625823 0.44977501051194557 5.067921008526021e-06 5.29517016289448 0.2965596526071659 LS(ph)PEPGR ddPTM_A549_MK2206_60min_R1 4 LSPEPGR 7 0 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 LS(1)PEPGR;LS(1)PEPGR;LS(1)PEPGR;LS(1)PEPGR 93.162 0.012184 42976600.0 4300.87 4749.59 3796.72 3528.05 7211.45 4829.25 4390.49 5013.200000000001 6645.25 6070.92 5499.04 True False 5026.751709824002 4991.323843860868 4335.151986850773 4392.422408380182 6150.655257950052 5340.278029603294 5188.185201576919 5723.836452281109 5140.111485283675 4699.494955562947 4133.47660221685 1.2161074547096928 1.207536493900544 1.048790740590079 1.0626460074854314 1.488010178804776 1.2919579674744543 1.255162590927553 1.384751143676808 1.2435322562433162 1.1369351777732413 1.0 12.013140005019233 -10.489495279169791 0.9119078920398187 1.0063493051433778 1.2429131542368819 0.20348223103051633 0.12472467137482293 0.5008097952011127 0.7754996267248978 0.07287615894453661 0.02332648726239908 3.239699440056907e-11 10.489495279169791 0.23656384909350403 LS(ph)PEPGR ddPTM_A549_PD325901_60min_R1 4 LSPEPGR 7 0 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 LS(1)PEPGR;LS(1)PEPGR;LS(1)PEPGR;LS(1)PEPGR 78.192 0.016885 39603200.0 5242.74 5403.19 5284.04 4946.75 5965.0 5023.66 4432.67 4969.16 5031.54 6240.01 5640.33 True False 5774.9791052988 5858.535783796954 5642.646729913792 5252.299512615625 5546.03897813286 4982.748978549163 4601.357682500094 4870.046205569394 4820.081871451673 5846.014703673234 4946.605166997753 1.1674631207333277 1.184354842566236 1.1407109602277976 1.0617988166222303 1.1211808484603436 1.007306791290429 0.9302051664036083 0.9845229285856213 0.9744221963802153 1.1818235954379517 1.0 12.272223034300708 -6.8074347300979525 0.9934901675888342 0.9827853023353004 1.1730035641582213 0.4191019681352366 0.06799883389546775 0.1536740436443527 0.28987487185146527 0.0053926182541745105 0.017280090287125897 1.5579921671065635e-07 6.8074347300979525 0.1902182618229209 LS(ph)PEVAPPAHR ddPTM_A549_MK2206_60min_R1 2 LSPEVAPPAHR 11 0 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 LS(1)PEVAPPAHR;LS(1)PEVAPPAHR 84.169 0.00016674 106530000.0 6025.9 6067.6 6637.1 5289.0 7940.599999999999 6527.9 5362.6 6090.6 8447.8 9020.1 8090.299999999999 True False 7042.924600889685 6376.414923184993 7578.340581324743 6584.805237432232 6772.548258849214 7218.678045130677 6336.915005381261 6953.961201680225 6534.386788364532 6982.453145268482 6081.25522907907 1.1581366569211153 1.0485359819621682 1.246180319005027 1.0828036300705337 1.1136760428117785 1.1870375067654997 1.0420406259351997 1.143507539106086 1.0745128336529435 1.1481927467671649 1.0 12.570153425084214 -9.560097698772307 0.43197839864836657 0.9928255924698703 1.1383816952230346 0.0 0.07079531986801094 0.6886141761614092 0.2898514348688601 0.040135834952874455 0.018612388623914043 2.753609182460445e-10 9.560097698772307 0.14555610275316422 LS(ph)PEVAPPAHR ddPTM_A549_PD325901_60min_R1 2 LSPEVAPPAHR 11 0 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 LS(1)PEVAPPAHR;LS(1)PEVAPPAHR 84.169 0.00016674 102503000.0 9748.2 9671.5 9994.2 10237.7 12055.2 10900.0 11140.3 10741.4 11657.8 10955.2 13154.3 True False 10737.830087754448 10486.551247132205 10672.466512006804 10870.059477496341 11208.484340182265 10811.234013883477 11564.250212706065 10527.154350534716 11167.863207091536 10263.486802373875 11536.404491978052 0.9307778775632477 0.9089964949152163 0.9251120242384016 0.9422398014090907 0.9715751860101812 0.9371406855057112 1.002413726109151 0.912516058001856 0.9680540600719414 0.8896607959187534 1.0 13.493906034221775 -2.0000000008514216 0.048158801571339276 1.113605200287459 0.650557251943517 0.0 0.04034495641835969 219.85018999786226 0.7786630033481079 1.7897057067872715 7.61261291492511 0.009999999980395293 2.0000000008514216 -0.46304794834394203 LS(ph)PGESAYQK ddPTM_A549_MK2206_60min_R1 2 LSPGESAYQK 10 0 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 LS(1)PGESAYQK;LS(0.999)PGES(0.001)AYQK 174.57 1.1483e-10 36161000.0 14270.1 17135.7 14763.6 13082.400000000001 20839.0 16377.6 14453.400000000001 15508.8 23974.1 22293.1 22328.6 True False 16678.544009551424 18007.833937507596 16857.300478589426 16287.58858729126 17773.61070525637 18110.666761428965 17079.395692160055 17707.219893708057 18544.004628770814 17257.07322676962 16783.792381990144 0.9937291662072955 1.0729299748030074 1.0043797072155254 0.9704355378447522 1.058974652494412 1.079056887099165 1.0176124265268622 1.0550190023030073 1.104875716209971 1.0281986832300982 1.0 14.034781116335262 -6.840797068701193 24.999755809875165 1.0513739373569146 1.0143991886705157 0.21102663429947421 0.03555074622155803 49.03307871117495 15443.774917284045 0.006438483396744104 0.01216759620663924 1.442789361297096e-07 6.840797068701193 -0.03697474868639894 LS(ph)PGESAYQK ddPTM_A549_PD325901_60min_R1 2 LSPGESAYQK 10 0 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 LS(1)PGESAYQK;LS(0.963)PGES(0.037)AYQK 181.87 6.1668e-14 50872000.0 28628.0 34098.0 31867.0 34808.0 35621.0 31045.0 29713.0 30226.0 39769.0 37770.0 35393.0 True False 31534.293485180293 36971.55812694139 34029.68625183814 36958.01110529634 33119.103845778816 30792.179812936956 30843.74447457748 29623.118718161728 38097.64723042281 35385.195754131455 31039.885374712412 1.0159281551622825 1.1910984103395368 1.0963212602441328 1.1906619711748456 1.0669853785207695 0.9920197655762847 0.9936810043668935 0.9543565757589783 1.2273771881084399 1.1399911864029975 1.0 14.921835609444358 -4.878704357289073 9.298749550910866 1.0916622162447052 0.0001781024096971862 0.043098629858917215 0.089370204080969 47628.02379888206 113353.18631931723 0.014342576082551363 1003740.6458306275 1.3221954024990708e-05 4.878704357289073 -1.091484113835008 LS(ph)PGKETR ddPTM_A549_MK2206_60min_R1 2 LSPGKETR 8 1 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 LS(0.971)PGKET(0.029)R;LS(1)PGKETR 92.60600000000001 0.00071967 103321000.0 11339.8 12980.0 12097.4 10805.2 15866.099999999999 12164.0 11668.400000000001 11808.7 17049.2 15342.4 15571.0 True False 13253.681008508085 13640.626557937434 13812.993227240491 13452.474485063867 13532.217707695581 13451.18640619029 13788.397241783972 13482.619387627039 13187.583421977872 11876.541184240437 11704.290962262248 1.1323779502100113 1.165438094620037 1.180164887542292 1.149362616534246 1.156175777868737 1.1492525646842255 1.1780634372677028 1.1519381593552822 1.1267306549792853 1.0147168438082725 1.0 13.514749919192756 -10.240622172983363 0.5388600760870084 0.9881137367864662 1.1621135443270167 0.9394733051268583 0.014486753113917316 0.16747100261358192 0.08515544258767196 0.013851419545708635 0.0036663438095020408 5.746161487172997e-11 10.240622172983363 0.17399980754055056 LS(ph)PGKETR ddPTM_A549_PD325901_60min_R1 1 LSPGKETR 8 1 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 LS(1)PGKETR 104.07 0.00058294 72914000.0 7301.0 7221.2 7480.7 6535.3 8900.3 5968.2 7322.0 6885.2 7737.8 7885.7 8413.1 True False 8042.192145287871 7829.7558668036045 7988.385287103449 6938.970638256815 8275.173632368122 5919.5969579504035 7600.64271675214 6747.869284665089 7412.607174924334 7387.795556218016 7378.3420350349725 1.0899728024399933 1.0611809305701958 1.08268026193036 0.9404512023579461 1.1215492034761572 0.8022936494190792 1.0301288122265957 0.9145508913281363 1.004644016193158 1.001281252771714 1.0 12.849080953718023 -6.242432585019621 23.976500250598047 0.9889113594741785 1.0762683134545505 0.25117032639849457 0.07566418575908415 540.304304674665 681574.6805345512 0.009427269051579703 0.024890594690426197 5.722257736379844e-07 6.242432585019621 0.08735695398037202 LS(ph)PGSYPTVIQQQNATSQR ddPTM_A549_PD325901_60min_R1 2 LSPGSYPTVIQQQNATSQR 19 0 Q13469-3;Q13469-4;Q13469-2;Q13469;Q13469-5 Q13469-3 NFATC2 Nuclear factor of activated T-cells, cytoplasmic 2 1 LS(0.999)PGS(0.001)YPTVIQQQNATSQR;LS(0.805)PGS(0.192)Y(0.001)PT(0.002)VIQQQNATSQR 115.57 6.4048e-14 9119100.0 4267.7 4807.6 4632.0 4950.2 5175.299999999999 4524.200000000001 5346.799999999999 5486.5 4641.799999999999 5537.299999999999 4485.200000000001 True False 4700.95376228531 5212.75332427367 4946.355374478747 5255.962611280106 4811.8047818157565 4487.35641519373 5550.275399881222 5377.0674534240125 4446.721288294316 5187.67393299847 3933.5488340253723 1.195092259087227 1.3252036632119886 1.257479081406732 1.336188473323579 1.2232731776947654 1.1407908238936548 1.4110096592347077 1.3669761531653402 1.1304604254127923 1.318827896103605 1.0 11.941615779075528 -9.088174143218009 2.1746562640463614 1.0465702665642826 1.281045143471352 0.047602838984403095 0.11386604297537294 0.1362297336519295 1.3233903192912089 0.016364037294943987 0.01585810490685707 8.1625500414223e-10 9.088174143218009 0.23447487690706925 LS(ph)PGTDSSSNLGGVK ddPTM_A549_PD325901_60min_R1 1 LSPGTDSSSNLGGVK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 LS(0.986)PGT(0.014)DSSSNLGGVK 187.75 1.7983e-33 24978000.0 9652.8 10878.0 10858.0 9030.2 12261.0 8866.4 10939.0 10276.0 10245.0 11074.0 10325.0 True False 10632.745149984221 11794.727236344323 11594.88917445817 9587.974944927812 11399.829658153723 8794.194978045547 11355.289631050478 10071.03711863395 9814.438277947196 10374.785750099332 9055.090455567637 1.1742284853097789 1.3025521163173124 1.2804829759959941 1.0588491624655747 1.2589415549288514 0.9711879766632618 1.2540227716961718 1.1121961915291134 1.0838586677963735 1.1457407080588868 1.0 13.144513337670444 -3.777719674725962 0.08581091357900306 0.8517103513498026 1.759883849765236 0.1762323466100304 0.09948931009603162 60.51946498435067 0.5289829834565803 1.0702938324055875 6.709820225365075 0.00016683237226645752 3.777719674725962 0.9081734984154335 LS(ph)PGTDSSSNLGGVKLEGK ddPTM_A549_MK2206_60min_R1 2 LSPGTDSSSNLGGVKLEGK 19 1 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 LS(0.861)PGT(0.13)DS(0.003)S(0.003)S(0.003)NLGGVKLEGK;LS(0.888)PGT(0.063)DS(0.038)S(0.006)S(0.006)NLGGVKLEGK 71.558 0.00024072 4653000.0 3430.5 4154.200000000001 3893.3 4070.8 5351.4 3892.0 3879.8 3119.7 5493.2 5914.4 5900.200000000001 True False 4009.484532327469 4365.631035977173 4445.428483113352 5068.146182745158 4564.216148956713 4303.848856699492 4584.709439055353 3561.9270286805545 4248.998970837858 4578.332932270803 4435.017502764093 0.9040515690927007 0.984354860664321 1.0023474496645777 1.1427567488936565 1.0291314850757858 0.9704243227940249 1.03375227633216 0.8031370849067921 0.9580568663347326 1.032314512720049 1.0 12.114724082785074 LS(ph)PGTDSSSNLGGVKLEGK ddPTM_A549_PD325901_60min_R1 2 LSPGTDSSSNLGGVKLEGK 19 1 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 LS(0.685)PGT(0.305)DS(0.003)S(0.003)S(0.003)NLGGVKLEGK;LS(0.997)PGT(0.003)DSSSNLGGVKLEGK 99.366 1.2745e-07 6222300.0 4777.2 5939.8 5822.3 6251.7 7475.6 6637.4 6890.7 7050.6 6845.3 6918.7 7330.9 True False 5262.177827211234 6440.3677917299165 6217.436290334118 6637.853310359149 6950.539645419944 6583.347215022957 7152.929359235725 6909.970251911305 6557.61584617198 6481.852101247273 6429.245774403956 0.8184751387419283 1.0017299101195103 0.9670553138731931 1.0324466575512947 1.0810816523909161 1.023968820920256 1.1125611946136653 1.0747715197669383 1.0199665833711147 1.0081823480839311 1.0 12.650433787168797 -4.496479815477107 1.1869048598555878 1.0275902651919318 4.213598741338652e-14 0.7172534419807965 0.039002147739199085 3.645821664069752 1.1169986601921598 0.006266840623333395 7.206058846612842 3.1880137402332764e-05 4.496479815477107 -1.0275902651918896 LS(ph)PHKVQGR ddPTM_A549_MK2206_60min_R1 5 LSPHKVQGR 9 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 1 LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR 74.21 0.00060531 5230588000.0 16420.2 17275.5 16126.8 15318.400000000001 25796.899999999998 18782.8 18237.899999999998 19426.3 26535.999999999996 24821.7 25593.5 True False 19191.52832465339 18154.749160373507 18413.822736874197 19071.408687669118 22002.21018294678 20770.383428986424 21551.49035479858 22180.03751554863 20525.638369284454 19214.46073058067 19237.9276053342 0.9975881351862482 0.9436956793277279 0.9571624924801412 0.991344238263018 1.143689207814989 1.0796580512771714 1.1202604977483588 1.1529327883216827 1.0669360437552122 0.9987801765743717 1.0 14.231665773535763 -6.539746686326049 24.87938277560277 1.0589325119328343 0.9656284296139729 0.4816778782494108 0.0512923533410161 192.7662673018711 284320.05791081407 0.008542527917035476 0.017786107154190538 2.885714181005872e-07 6.539746686326049 -0.09330408231886145 LS(ph)PHKVQGR ddPTM_A549_PD325901_60min_R1 8 LSPHKVQGR 9 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 1 LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR 86.463 0.00050231 7264144200.0 33067.65 33367.34 34854.73 32399.669999999995 39584.69999999999 34486.81 35012.82 34665.22 36597.29 39040.71 40461.07 True False 36424.65348488267 36179.322844489914 37220.18157631816 34400.92403091062 36804.407231801466 34205.96085342543 36345.25202485028 33973.794992760995 35059.233171804204 36575.67290787074 35484.61489385512 1.0264914412581194 1.019577722703568 1.0489103992717583 0.9694602614066367 1.0371933679397178 0.9639659597756797 1.0242538106604673 0.9574232408717572 0.9880122209773629 1.0307473539526721 1.0 15.11490602874649 -6.25638685976083 24.992857923751764 0.993284754982581 1.030451640746394 0.25862304705551586 0.02620077645931823 341.5544915457854 1689535.5686636004 0.0029045722158170632 0.00741761696809111 5.541318848198557e-07 6.25638685976083 0.037166885763812996 LS(ph)PIPEEVPK ddPTM_A549_MK2206_60min_R1 2 LSPIPEEVPK 10 0 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LS(1)PIPEEVPK;LS(1)PIPEEVPK 105.36 0.00032132 31389000.0 14979.3 16055.4 15007.1 13585.3 22632.0 18856.4 16670.4 17492.6 24406.0 21686.0 19812.4 True False 17507.439631276146 16872.551281841956 17135.3324400715 16913.699109867295 19302.862780429103 20851.771732134705 19699.195894847235 19972.22961884074 18878.079968373404 16787.11753841889 14892.434285577321 1.1755928745800373 1.1329612713606056 1.1506065503788274 1.1357242735156792 1.2961522884894037 1.4001587203462595 1.322765339574139 1.341099059821468 1.2676288917155745 1.12722455016481 1.0 13.862291972602332 -10.612378366832145 0.9443231627350254 1.0033244143771731 1.2473861147309362 0.3421023161903298 0.09273150978451855 0.38978837239482794 0.6322378152771144 0.062113232175777876 0.01785178901081584 2.4413027097089958e-11 10.612378366832145 0.24406170035376307 LS(ph)PIPEEVPK ddPTM_A549_PD325901_60min_R1 2 LSPIPEEVPK 10 0 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LS(1)PIPEEVPK;LS(1)PIPEEVPK 158.56 1.1967e-08 36717000.0 10216.3 10253.9 9635.5 9369.4 12383.3 9020.5 8932.3 9878.1 9890.9 11096.8 11533.6 True False 11253.451255157444 11118.032139065179 10289.422972968483 9948.126558548713 11513.539728065818 8947.040038737241 9272.223564442113 9681.073546280466 9475.21986953127 10396.146154208262 10115.040317514284 1.1125463569010192 1.0991584600818847 1.0172399367654772 0.9834984583623895 1.1382594005216193 0.8845283615177846 0.9166768765505733 0.9570968817116428 0.9367456354202407 1.0277908765432442 1.0 13.304214449891715 -5.965531673716204 0.706767836243345 0.9632407953238684 1.1419567122602365 0.3947655653969411 0.06142911055647079 1.033966915156525 0.60446763637514 0.010055774274050942 0.12136888180199565 1.082600756630252e-06 5.965531673716204 0.17871591693636812 LS(ph)PSSR ddPTM_A549_PD325901_60min_R1 1 LSPSSR 6 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;A0A0J9YW54 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 LS(0.899)PS(0.091)S(0.011)R 81.89 0.013616999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LS(ph)PSWNPK ddPTM_A549_PD325901_60min_R1 1 LSPSWNPK 8 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 LS(0.965)PS(0.035)WNPK 116.52 0.0012831 6420000.0 3346.2 3535.5 3057.3 3047.2 3568.8 3169.6 2660.4 2870.6 4166.6 3924.4 4556.9 True False 3685.9037606577576 3833.4489928383296 3264.786763038402 3235.4186233066835 3318.139799691623 3143.787828477531 2761.64297782674 2813.343631057864 3991.492291741801 3676.6127142577075 3996.4301885691198 0.9222990485860225 0.9592183053273492 0.8169257584873076 0.8095771652813711 0.830275932051161 0.7866490042712673 0.6910274538826656 0.7039641625931048 0.9987644230990341 0.9199742121791149 1.0 11.964496172474792 -8.786268629376762 24.613091981588106 0.9994165902646446 0.8151161496711837 0.4369761033023365 0.07827248176866128 108.72449731958935 107777.4220464153 0.014134889064590424 0.015051153674785817 1.6358043947192199e-09 8.786268629376762 -0.18430044059346085 LS(ph)PVPVPR ddPTM_A549_MK2206_60min_R1 2 LSPVPVPR 8 0 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 1 LS(1)PVPVPR;LS(1)PVPVPR 84.615 0.0031311 10992200.0 1958.08 2574.1 1981.12 1881.4299999999998 3507.5 2369.5 2214.88 2077.21 3566.4 3276.8999999999996 2951.7 True False 2288.556033540233 2705.1106951299503 2262.072605878179 2342.380434460603 2991.551396357156 2620.2389172531957 2617.2950261289016 2371.6608786888287 2758.616094370519 2536.646014094109 2218.7114272242925 1.0314798064583455 1.219226016478477 1.0195434061959707 1.0557391131261382 1.348328295266285 1.1809732825558266 1.179646435320007 1.0689361624895415 1.2433415452417222 1.1432969528928631 1.0 11.115506322820986 -2.0748108346650156 21.44645731277371 1.1288846807358899 0.009848368872425795 0.0 0.10527613308536513 0.0 0.0 0.015322805094221608 0.0 0.00841761707348197 2.0748108346650156 -1.119036311863464 LS(ph)PVPVPR ddPTM_A549_PD325901_60min_R1 3 LSPVPVPR 8 0 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 1 LS(1)PVPVPR;LS(1)PVPVPR;LS(1)PVPVPR 88.948 0.0026726 18931100.0 1347.31 1234.12 1082.46 1193.96 1152.97 1303.1599999999999 1233.29 1142.6100000000001 1302.76 1208.1799999999998 1346.42 True False 1484.0879193628002 1338.1236235445165 1155.9222449607664 1267.7081975201 1071.989364730568 1292.5474970213209 1280.223525832184 1119.8197471897952 1248.0095276699346 1131.8953086107115 1180.8188756596007 1.2568294341787132 1.1332166610201297 0.9789157920727452 1.0735839540267877 0.9078355595660333 1.0946196098866636 1.0841828092534989 0.9483416722689738 1.0569017428458716 0.9585681021388138 1.0 10.205571973167313 -5.473769030422088 2.959246133849286 1.023315070960242 1.2562130239122216 0.6091387905358426 0.059498786040559505 0.13276693855168872 2.0440397386085407 0.007229756142511895 0.05662155784113307 3.359162160955042e-06 5.473769030422088 0.23289795295197946 LS(ph)QSDEDVIR ddPTM_A549_MK2206_60min_R1 2 LSQSDEDVIR 10 0 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 LS(0.977)QS(0.023)DEDVIR;LS(0.5)QS(0.5)DEDVIR 84.289 0.00091565 2035890.0 507.84000000000003 727.55 448.49 613.94 572.21 845.5 582.14 460.92999999999995 752.0699999999999 710.76 891.7 True False 593.5509765040607 764.5791873826952 512.0926258935878 764.3553275608142 488.03866700200376 934.9702488025232 687.9073026577872 526.2682390389234 581.7273458090053 550.1988223557418 670.2662803319785 0.8855450347436228 1.1407096102223793 0.764013707567016 1.140375623822571 0.7281265391424456 1.394923594156398 1.0263194238520716 0.7851629337198139 0.8679048355541318 0.8208660326508324 1.0 9.388590546532294 LS(ph)QSDEDVIR ddPTM_A549_PD325901_60min_R1 3 LSQSDEDVIR 10 0 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 LS(0.998)QS(0.002)DEDVIR;LS(0.978)QS(0.022)DEDVIR;LS(0.54)QS(0.46)DEDVIR 104.87 0.00033434 3897810.0 1114.1100000000001 839.22 1437.61 1327.14 1113.1399999999999 1108.42 1205.44 1147.96 1327.05 1642.85 1412.05 True False 1227.213627035567 909.9440146428459 1535.1748596512084 1409.1144236463747 1034.9568865245274 1099.3933950154803 1251.3136788420788 1125.0630372428016 1271.2787034406856 1539.1201706294655 1238.3768017224481 0.9909856396927378 0.7347876780130347 1.239667004029748 1.1378721094310302 0.8357366555034093 0.8877696945601234 1.0104466403938097 0.9084981531291288 1.026568570787562 1.242852876837418 1.0 10.274234635777837 -2.000000000360473 0.08000699623378074 1.038369496616884 0.8359254827200397 0.036037838246844034 0.14936690768479793 881.7216960181247 4.9952149184621755 1.8736159202080376 19.75559948032155 0.009999999991699803 2.000000000360473 -0.2024440138968442 LS(ph)RGS(ph)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_A549_MK2206_60min_R1 1 LSRGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 36 3 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 2 LS(0.961)RGS(0.968)IDREDGS(0.07)LQGPIGNQHIYQPVGKPDPAAPPK 73.57600000000001 6.7152e-06 17339000.0 948.59 1383.5 1146.8 1300.8 2049.2 1366.9 1275.4 1500.3 2331.4 1674.9 2132.8 True False 1108.6888012011402 1453.914240593717 1309.433484302362 1619.4960583951306 1747.765394558825 1511.5444507252146 1507.1236709549971 1712.9721194760511 1803.341622480772 1296.5389267314304 1603.1668977145277 0.6915616850508112 0.906901360467469 0.8167792674418917 1.010185565023755 1.0901955355056523 0.9428490900604735 0.9400915607124563 1.0684926952509197 1.1248620621169343 0.8087360889123736 1.0 10.646708909762356 -4.319710471608128 0.4827381340986422 1.0540333133661193 3.308929973284188e-16 0.37858313391301734 0.09990351736205577 4.191486522428202 0.33446554560119646 0.014639751187740415 3.086521054608383 4.789492840441699e-05 4.319710471608128 -1.054033313366119 LS(ph)RGS(ph)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_A549_PD325901_60min_R1 2 LSRGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 36 3 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 2 LS(0.992)RGS(0.995)IDREDGS(0.013)LQGPIGNQHIYQPVGKPDPAAPPK;LS(0.994)RGS(0.996)IDREDGS(0.01)LQGPIGNQHIYQPVGKPDPAAPPK 113.18 1.0314999999999999e-15 72259000.0 4492.1 4546.9 4272.3 4957.9 5263.6 4473.4 4665.2 4981.7 4605.7 5312.9 5753.799999999999 True False 4948.134685090761 4930.083220346938 4562.243969426934 5264.1382227921395 4893.902894434215 4436.970113551043 4842.736738895396 4882.336085431955 4412.138445753187 4977.442587294811 5046.1190763433515 0.9805822276941601 0.9770049310686306 0.9041094552871599 1.0432053114780586 0.9698350000056997 0.8792836725458874 0.9596952956577205 0.9675427812079931 0.8743627288618055 0.9863902361380052 1.0 12.300958535531016 -7.029691490628761 24.787925030755776 0.9386890222975164 0.9755537935793296 0.08678578422704741 0.047370420975944946 1204.6271065095116 1005680.9546463392 0.008092004019818952 0.014030663991186685 9.339174913224996e-08 7.029691490628761 0.0368647712818132 LS(ph)RGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_A549_MK2206_60min_R1 1 LSRGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 36 3 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 1 LS(0.399)RGS(0.399)IDREDGS(0.203)LQGPIGNQHIYQPVGKPDPAAPPK 70.024 6.8296e-05 10570000.0 925.46 1680.2 1601.3 1098.5 1805.8 1561.7 1369.0 1256.6 1879.6 1948.3 2207.7 True False 1081.6550226753461 1765.7150032855525 1828.3884185676427 1367.6325493135384 1540.1692121287952 1726.95805742744 1617.7295793769727 1434.726898176102 1453.8736011044268 1508.1776768468849 1659.4671605796893 0.6518086337409049 1.0640252758414022 1.1017924680889408 0.8241395682911818 0.9281106904163017 1.0406702214126218 0.9748488055719423 0.8645708286718488 0.8761086905730366 0.9088324931480081 1.0 10.696504364673297 -5.247450657459921 24.49924874450354 0.9515400394110611 0.6518083650954559 0.5215592825236965 0.08416535102380472 1194.0541754845215 2091169.3667566 0.011953514401056941 0.333275351038108 5.656520202174191e-06 5.247450657459921 -0.2997316743156052 LS(ph)RGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_A549_PD325901_60min_R1 4 LSRGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 36 3 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-6;B4DWJ1 H0YBP1 PTK2 Focal adhesion kinase 1 1 LS(0.5)RGS(0.5)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK;LS(0.489)RGS(0.489)IDREDGS(0.023)LQGPIGNQHIYQPVGKPDPAAPPK;LS(0.49)RGS(0.49)IDREDGS(0.019)LQGPIGNQHIYQPVGKPDPAAPPK;LS(0.402)RGS(0.402)IDREDGS(0.196)LQGPIGNQHIYQPVGKPDPAAPPK 191.69 4.0661999999999994e-78 85746000.0 7024.5 7676.699999999999 7738.299999999999 7577.6 9022.8 8446.0 8340.7 9222.5 9743.7 7661.299999999999 9986.099999999999 True False 7737.622068836411 8323.642450380996 8263.467572178086 8045.651142021767 8389.069654970179 8377.218576262376 8658.109902706166 9038.550002588712 9334.206173629487 7177.56421051436 8757.873007103539 0.8835047119957552 0.9504182629309266 0.9435473162805125 0.9186763881476602 0.9578889358370208 0.956535744405929 0.9886087518834249 1.0320485345308748 1.0658074358989316 0.8195556392165786 1.0 13.096364814910487 -7.801847120593569 1.5202430808285075 1.0320614459075905 0.9311778855009818 0.0 0.06809254108061476 0.15215029445006112 0.7164383016144776 0.004886208353172194 0.007566442633509214 1.578166714772006e-08 7.801847120593569 -0.10088356040660873 LS(ph)SAGPR ddPTM_A549_MK2206_60min_R1 1 LSSAGPR 7 0 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LS(0.603)S(0.397)AGPR 66.07300000000001 0.024905 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LS(ph)SDLTR ddPTM_A549_MK2206_60min_R1 2 LSSDLTR 7 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LS(0.973)S(0.027)DLTR;LS(0.966)S(0.034)DLTR 113.66 0.007481399999999999 6907400.0 1788.56 1713.6999999999998 1707.35 1589.6 1917.27 1596.02 1065.88 1766.27 2037.8400000000001 1937.0900000000001 1948.8700000000001 True False 2090.425201906316 1800.9200101954827 1949.4779032295417 1979.052071359856 1635.2421227922116 1764.9097770476671 1259.5365990258051 2016.6441814750165 1576.272493761782 1499.5000236325668 1464.9117929242836 1.4269973195678705 1.229370955230317 1.330781766278199 1.350970127292945 1.116273437548012 1.204789111243703 0.859803713172037 1.3766318157964683 1.0760187073210723 1.0236111354112574 1.0 10.516598082591607 -2.0000000418576325 0.14954110615314142 0.956200262261692 2.5746363262768766 0.44025230735323406 0.12937434259344235 38.529603138393796 0.3598866139358954 0.21793995865969037 13.635704231742224 0.00999999903619244 2.0000000418576325 1.6184360640151847 LS(ph)SDSFAR ddPTM_A549_PD325901_60min_R1 2 LSSDSFAR 8 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LS(0.818)S(0.182)DSFAR;LS(0.666)S(0.334)DS(0.001)FAR 162.88 0.00016464 69729000.0 5718.3 6144.5 4564.3 5426.1 6242.2 5453.299999999999 5667.1 4845.9 5793.700000000001 5850.1 5332.799999999999 True False 6298.817606410034 6662.31857912463 4874.060845365576 5761.257873432789 5803.7694064209445 5408.890132835855 5882.764591656111 4749.24472296499 5550.210937134472 5480.72368761569 4676.899407404468 1.3467934752750392 1.4245161160782818 1.0421564418616664 1.231854134880807 1.2409438178705354 1.1565119669395711 1.257834321247645 1.0154686490468419 1.1867287392043064 1.1718711928972874 1.0 12.191336683699161 -2.0000000000529687 0.03007211458056218 0.2118100151970272 2.640932070826214 0.30284083286430075 0.10632944755717083 670.7272729303496 1.5042813348727915 38.31050061659277 95.29070558253126 0.009999999998780349 2.0000000000529687 2.429122055629187 LS(ph)SGTKDQSIMDVLK ddPTM_A549_PD325901_60min_R1 1 LSSGTKDQSIMDVLK 15 1 Q6ZT12;Q6ZT12-4 Q6ZT12 UBR3 E3 ubiquitin-protein ligase UBR3 1 LS(0.473)S(0.473)GT(0.049)KDQS(0.006)IMDVLK 50.387 0.006531100000000001 1872700.0 1208.2 1038.4 1487.2 1079.6 1642.9 1210.3 1647.7 1546.5 1522.0 1364.9 1414.9 True False 1330.8555745701701 1125.9096122651176 1588.1303352601037 1146.2844400505041 1527.508371697312 1200.4437180736861 1710.4041251560363 1515.6538442942206 1458.0356328975722 1278.7199810647082 1240.8762697900872 1.0725127129679934 0.9073504262077492 1.279845842751719 0.9237701356352115 1.2309916861861763 0.9674161294717636 1.3783841038763491 1.2214383345010023 1.1750048481015924 1.030497570302495 1.0 10.277143553345914 -5.733724040810593 24.99505312196868 1.1146271716829417 0.9899316719628677 0.12339524886176001 0.14058766425305683 377.47423147208366 340419.17231862916 0.01869459097286319 0.07237210600746202 1.8461881505325154e-06 5.733724040810593 -0.12469549972007399 LS(ph)SLPR ddPTM_A549_MK2206_60min_R1 1 LSSLPR 6 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ES05 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 LS(0.978)S(0.022)LPR 77.282 0.04471 1355100.0 373.23 410.75 339.65 408.82 640.34 460.94 347.66 373.49 768.99 736.7 417.99 True False 436.2220994025885 431.65542054489975 387.8174772787736 508.9809183526274 546.1468342532689 509.7163648527912 410.825321816069 426.43335126515416 594.8149928246934 570.278958339629 314.19154706287304 1.388395402360382 1.3738607056112841 1.2343345354264645 1.6199701204907813 1.738260750038508 1.6223108788817655 1.3075632545068392 1.3572400507000921 1.8931603933496806 1.8150677943780267 1.0 8.295500556993344 -11.091257970581061 1.4333247424259588 1.001117547222676 1.5469903143023975 0.0 0.3068454272654747 0.3140953554875247 1.1568019048702263 0.16235165395920406 0.03585273107810637 8.104794906620066e-12 11.091257970581061 0.5458727670797214 LS(ph)SLPR ddPTM_A549_PD325901_60min_R1 1 LSSLPR 6 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ES05 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 LS(0.966)S(0.034)LPR 83.75299999999999 0.040909 2224900.0 703.51 772.13 708.43 829.34 966.37 785.54 731.32 868.92 1057.7 790.65 634.3 True False 774.9298173033111 837.2001048904709 756.5083199356606 880.5664482322017 898.4955049955153 779.1428226849564 759.1507827936596 851.5887089454466 1013.2485472508288 740.7282240668269 556.2851211589883 1.3930443001761201 1.504983816835173 1.359929092404123 1.5829408602509298 1.6151708374359377 1.4006177642530808 1.3646792875064 1.5308493370651548 1.8214554168549093 1.3315621717934176 1.0 9.119680708421782 -11.02786019467711 1.3298701355731466 1.001045762757334 1.538242004194175 0.33648797263020946 0.1610344557496517 0.2349015551859741 0.7425557931025981 0.11234869439718145 0.025507286884788555 9.378638695201259e-12 11.02786019467711 0.537196241436841 LS(ph)SLRAS(ph)TSK ddPTM_A549_MK2206_60min_R1 3 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.511)S(0.511)LRAS(0.814)T(0.144)S(0.021)K;LS(0.723)S(0.277)LRAS(0.481)T(0.348)S(0.171)K;LS(0.5)S(0.5)LRAS(0.827)T(0.144)S(0.027)K 97.223 0.0016415 454037000.0 17999.0 21819.0 21669.5 23384.300000000003 28964.699999999997 20430.100000000002 16897.2 15196.9 22854.5 20744.6 21116.0 True False 21036.791166699335 22929.493903515933 24742.560941829488 29113.454549761136 24704.030999306084 22591.99962159718 19967.20251910048 17351.10711355436 17677.99224113702 16058.380452249583 15872.314428047612 1.3253764132548742 1.4446219552580017 1.5588502265370614 1.8342286930956586 1.556422732884635 1.423358875859677 1.2579893505522346 1.0931680563795791 1.113762729517167 1.0117226775619552 1.0 13.954224890231373 -7.894600790049133 1.5555914413929912 1.0538339435470927 1.553676207871447 0.7804398642113906 0.11803305122296465 0.13186832714781865 0.6467808235209374 0.0215246380925582 0.03203205076585479 1.2746742421927281e-08 7.894600790049133 0.4998422643243543 LS(ph)SLRAS(ph)TSK ddPTM_A549_PD325901_60min_R1 1 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.5)S(0.5)LRAS(0.514)T(0.423)S(0.063)K 67.964 0.001259 591880000.0 2941.6 2867.2 2953.4 2713.9 3035.8 2342.1 2581.8 2579.3 2694.5 2362.1 2834.6 True False 3240.229066508534 3108.8290064392754 3153.8354842369477 2881.5314392859063 2822.575880941445 2323.026714120781 2680.051811815171 2527.8538380782957 2581.259535376155 2212.9566028814916 2485.962170009883 1.303410448315733 1.2505536262552686 1.2686578751214102 1.1591211942193196 1.1354058058454783 0.9344577894809822 1.0780742539636137 1.0168512894418849 1.0383341977267069 0.8901811256736437 1.0 11.279588627088527 -6.683342699716034 1.4501807376219316 1.0181828180905157 1.2780088025836234 0.8181913593198511 0.05600993252280508 0.08958152530425141 0.3750942287733936 0.0057485896646998335 0.015961563845930147 2.0732768588632271e-07 6.683342699716034 0.2598259844931077 LS(ph)SLRAS(ph)TSKSESSQK ddPTM_A549_MK2206_60min_R1 1 LSSLRASTSKSESSQK 16 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.896)S(0.104)LRAS(0.869)T(0.115)S(0.016)KSESSQK 88.396 3.9338e-06 141200000.0 1777.3 3020.3 2537.9 2692.6 2943.1 1691.5 1873.8 1343.0 2898.3 2302.5 3364.4 True False 2077.2647891868846 3174.0203692556584 2897.812382116294 3352.2871208754054 2510.173888700996 1870.4934072731733 2214.245205139934 1533.3743627650063 2241.8396776340505 1782.3636508443008 2528.926627283737 0.8214017626197513 1.255085985893075 1.14586653122031 1.3255770589422047 0.9925847043641266 0.7396392552844555 0.87556719963766 0.6063340652994622 0.8864787350679129 0.7047905746315374 1.0 11.304309464806982 -6.991490391826547 24.54285000274273 0.8967072772838242 1.1476818287585984 0.4153511006691434 0.16697420645594316 137.27944792188717 395927.73524758784 0.023258216105100434 0.04390141870960937 1.0197873211996232e-07 6.991490391826547 0.2509745514747742 LS(ph)SLRAST(ph)SK ddPTM_A549_MK2206_60min_R1 1 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.501)S(0.501)LRAS(0.108)T(0.52)S(0.37)K 47.773999999999994 0.017301 47426000.0 2466.7 3310.3 3756.2 3549.6 4004.8 2940.7 2272.0 2869.0 4272.2 3546.1 3255.0 True False 2883.0186549751243 3478.780130565508 4288.885641556101 4419.252159347601 3415.699225126482 3251.882922121325 2684.7929907556454 3275.689535944005 3304.5535213015182 2745.03354712659 2446.693666570137 1.1783324959583696 1.4218290495851844 1.7529311904290885 1.8062139203321959 1.3960469476813302 1.3290927943096087 1.097314726170557 1.3388229105672982 1.3506200496010439 1.1219359352716503 1.0 11.256617767613744 -7.304024005495361 2.3728169495442017 1.182051055051035 1.5459144735714723 0.42031189539576985 0.1844896345713585 0.243064947920335 2.6805505664633014 0.03263804848489985 0.05744794388505143 4.965648732194508e-08 7.304024005495361 0.36386341852043724 LS(ph)SLRAST(ph)SK ddPTM_A549_PD325901_60min_R1 1 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.5)S(0.5)LRAS(0.447)T(0.48)S(0.073)K 55.213 0.0093895 542130000.0 2909.0 2359.0 2416.4 2903.5 2803.3 2160.3 2514.5 2538.1 2912.3 2267.1 2915.9 True False 3204.319538507387 2557.80120891122 2580.3914349936217 3082.842600673062 2606.405878859988 2142.7072330451833 2610.190673487196 2487.475604399069 2789.906158796057 2123.9549190942926 2557.2627854130446 1.2530270869248312 1.0002105468007616 1.009044299128156 1.2055243670138212 1.0192170682368906 0.8378909063501259 1.0206970861094364 0.972710203498815 1.09097358891313 0.8305579431295071 1.0 11.320384704816277 -5.256685412561717 24.228432386724336 1.0296639358504918 1.2530272283550696 0.29659267273172063 0.10300562666204098 270.37158327864114 1377862.8944816086 0.011622959664007865 0.1295251290407832 5.537510815131006e-06 5.256685412561717 0.22336329250457787 LS(ph)SPISKR ddPTM_A549_MK2206_60min_R1 2 LSSPISKR 8 1 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 LS(0.556)S(0.444)PISKR;LS(0.5)S(0.5)PISKR 63.283 0.014131999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LS(ph)SPVKR ddPTM_A549_PD325901_60min_R1 2 LSSPVKR 7 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.5)S(0.5)PVKR;LS(0.68)S(0.32)PVKR 50.607 0.021656 24839000.0 3056.3 2744.7 2606.6 2830.5 3178.6000000000004 2465.3 2846.8 3115.3 2430.0 3336.2 3328.3 True False 3366.573326070857 2976.005501525487 2783.4995507591357 3005.333556468093 2955.3461015747025 2445.2234141676104 2955.1365318287335 3053.162897594428 2327.875550552629 3125.551762640546 2918.9401998320377 1.1533546751881307 1.0195500071213288 0.9535993751839467 1.0295975082466666 1.0124723013320929 0.8377093214545176 1.012400504812938 1.0459833667610299 0.797507105725078 1.0707830749051992 1.0 11.511228939390758 -2.0000000000151026 0.4200554110005172 0.9183078826374884 4.994210510202763 0.1319131628485405 0.08940901341636084 59.03554166422681 0.6652278882639697 0.019954191155804143 204.4845426709101 0.00999999999965225 2.0000000000151026 4.075902627565275 LS(ph)SPVKRPR ddPTM_A549_MK2206_60min_R1 1 LSSPVKRPR 9 2 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.5)S(0.5)PVKRPR 90.82700000000001 0.00021583 78300000.0 2217.1 2570.5 2143.1 1754.3 2944.3 2380.2 1938.1 1903.7 3659.3 2940.7 3404.2 True False 2591.292277109234 2701.3274705067943 2447.0238055531845 2184.1035787535197 2511.1973702906257 2632.07118415111 2290.2276828272534 2173.555304836739 2830.474392701334 2276.393827595152 2558.843188859617 1.0126811554498103 1.0556830845545786 0.9563008066327557 0.8535511625966009 0.9813799380999876 1.0286176173711248 0.8950246317547595 0.8494288803236174 1.106153907759691 0.8896183390626831 1.0 11.321276023447659 -8.781980175283095 24.99979406590947 1.0501282279587567 0.9556186027449578 0.0 0.08314436343164958 247.04822291399213 300676.24785026343 0.01308883003339599 0.013941783677983214 1.6520372088636033e-09 8.781980175283095 -0.09450962521379891 LS(ph)SSKENLDASK ddPTM_A549_MK2206_60min_R1 1 LSSSKENLDASK 12 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 LS(0.498)S(0.275)S(0.227)KENLDASK 112.8 1.2367e-05 69686000.0 6637.3 7132.8 6513.3 5587.9 10204.0 7909.4 7705.3 7714.7 10891.0 9191.9 10863.0 True False 7757.513973594835 7495.8290533479285 7436.983879758095 6956.935750850367 8703.005117157067 8746.367458165196 9105.253270981284 8808.282350277876 8424.205889353221 7115.443405948196 8165.417296452043 0.9500450120247441 0.9179970577382423 0.9107904237777952 0.8520000262415525 1.0658371521243146 1.0711476389535635 1.1150995644689965 1.0787302143278292 1.0316932476939817 0.8714120966040436 1.0 12.99531090175808 -6.768677858810772 24.99994432567161 1.035151918967713 0.9086632137572671 0.4797097776347645 0.0629582525843673 81.02336999972947 279836.0256927623 0.006795313150925038 0.013030107537227664 1.7034215656181786e-07 6.768677858810772 -0.12648870521044586 LS(ph)STDDGYIDLQFK ddPTM_A549_MK2206_60min_R1 1 LSSTDDGYIDLQFK 14 0 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 LS(0.327)S(0.327)T(0.327)DDGY(0.018)IDLQFK 59.757 0.0075417 9263600.0 404.25 708.23 457.18 506.55 666.39 639.17 575.42 550.08 787.66 665.73 463.93 True False 472.47751703640245 744.2758819050869 522.0149985641383 630.6547727398939 568.3649137614951 706.806545153292 679.9663656428761 628.0555245493479 609.2562676345567 515.3411306304346 348.7233771833742 1.3548776708134276 2.134287319412239 1.4969314726773812 1.8084671519118365 1.6298446016213695 2.0268401587015537 1.9498731950090045 1.8010135415128432 1.7471047469071244 1.4777934728460873 1.0 8.4459392703105 -10.473903878463938 0.7205875532502223 0.976518919891643 1.789690649768225 0.34619307972386026 0.2533524344537526 0.33493211582486415 0.3018906772444177 0.15383773526592545 0.04015785882338899 3.358119306068724e-11 10.473903878463938 0.813171729876582 LS(ph)TASEETVQNR ddPTM_A549_PD325901_60min_R1 1 LSTASEETVQNR 12 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 LS(0.752)T(0.248)ASEETVQNR 175.48 6.0571e-16 6102100.0 1205.5 1148.1 1493.7 1546.0 1364.3 1113.2 1448.7 1310.7 1396.7 1380.1 1154.7 True False 1327.881472557805 1244.8544162573 1595.0714643477772 1641.4929087792516 1268.4762745794894 1104.1344682802837 1503.8310712590576 1284.5570602757407 1338.0015561550856 1292.96025047066 1012.6792202463876 1.3112557718274578 1.2292682533314188 1.5751004192222806 1.620940645330781 1.2525943548746519 1.0903101853039354 1.4850023987785308 1.2684738015688763 1.3212491472171675 1.2767717798693246 1.0 9.983961538120907 -11.395926022984302 0.30472917536716404 0.7392262197081206 1.3928766503422727 0.11610526694756929 0.16881972668174625 3.9744255839074243 0.3338734183751482 0.9302899780843454 0.06777811322715638 4.018592570715193e-12 11.395926022984302 0.6536504306341521 LS(ph)TGTTVEDVQK ddPTM_A549_PD325901_60min_R1 2 LSTGTTVEDVQK 12 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 LS(0.886)T(0.113)GT(0.001)TVEDVQK;LS(0.499)T(0.499)GT(0.002)T(0.001)VEDVQK 133.48 5.0738e-08 9680700.0 8507.7 8979.9 8060.700000000001 7551.5 10212.3 9002.8 7973.1 9450.0 11117.7 15643.4 16023.9 True False 9371.395440962284 9736.66768796179 8607.747574926785 8017.939004299169 9495.023278522405 8929.484181668828 8276.520683547735 9261.512336618413 10650.46173184319 14655.673054280653 14053.061883871216 0.6668579074370896 0.6928502676798586 0.6125175884129528 0.5705474771659126 0.6756551246258938 0.6354120017017253 0.5889478571959288 0.65903874992879 0.7578748190148361 1.0428811297772094 1.0 13.778596878921892 -9.782617574618165 0.5947692419690298 0.9949582149081918 0.6284147897994669 0.9103210778868742 0.04528311733356479 0.15683099024494465 0.11642725148448047 0.02556169975723784 0.011342384123822973 1.6496143480894467e-10 9.782617574618165 -0.36654342510872495 LS(ph)TPQKK ddPTM_A549_MK2206_60min_R1 1 LSTPQKK 7 1 Q96C90;F5GXC4;F5H2U0;B5MC51;P53671-3 Q96C90 PPP1R14B;LIMK2 Protein phosphatase 1 regulatory subunit 14B 1 LS(0.866)T(0.134)PQKK 78.934 0.0069217 309730000.0 8725.6 8248.6 5206.9 4675.4 9562.7 9627.3 7577.7 8473.1 10797.0 12430.0 11623.0 True False 10198.267959561737 8668.4185073808 5945.316715568517 5820.8732098866785 8156.039497632087 10646.05449591547 8954.470002662436 9674.187872780465 8351.496739266066 9622.054366990082 8736.68832151911 1.1672921803153546 0.9921858475859604 0.6805000358001512 0.6662562513017017 0.9335390250265834 1.2185457583159343 1.024927257689497 1.1073060542805704 0.9559110308073725 1.101338861235355 1.0 13.092870808378963 -7.001338119822125 24.99992311019633 1.0108610790199044 0.861949009188313 0.22334957343210826 0.14935363410469463 71.94291219044699 1344156.3241839905 0.02205790219642788 0.041290891331927405 9.969236070693073e-08 7.001338119822125 -0.14891206983159144 LS(ph)VDYGK ddPTM_A549_PD325901_60min_R1 2 LSVDYGK 7 0 Q9BQE3;F5H5D3;F8VQQ4;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;C9JDS9;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 1 LS(0.998)VDY(0.002)GK;LS(0.972)VDY(0.028)GK 69.954 0.02163 6948500.0 3311.1 3641.1000000000004 3918.7 4093.3999999999996 5145.4 4876.299999999999 2336.8999999999996 2485.0 2612.5 3358.0 3597.8 True False 3647.240434497008 3947.948275441561 4184.646547057398 4346.240021214092 4784.004854666356 4836.58902953211 2425.8320083007484 2435.434725555213 2502.7057102134727 3145.9753069201342 3155.2934083332943 1.1559116578079414 1.2512143133867752 1.3262305610012457 1.3774440151066285 1.5161838331838013 1.5328492167347816 0.7688134491372497 0.7718568165873585 0.793176857532075 0.9970468352044376 1.0 11.623558451221948 -7.765883633586492 24.999997110162585 0.8788875075661322 1.3613897170134992 0.7973899060871256 0.12386270661635489 42.68118927620011 240092.22611920247 0.02191839491184752 0.030848002877024577 1.7144166128778417e-08 7.765883633586492 0.482502209447367 LS(ph)VDYGKK ddPTM_A549_PD325901_60min_R1 2 LSVDYGKK 8 1 Q9BQE3;F5H5D3;F8VQQ4;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;C9JDS9;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 1 LS(0.925)VDY(0.075)GKK;LS(0.982)VDY(0.018)GKK 51.927 0.011791 12507300.0 4871.299999999999 5863.299999999999 6981.3 6375.6 8780.0 10082.5 3577.7 3506.9 4907.1 5541.1 5757.2 True False 5365.830789938473 6357.420868253142 7455.092999967292 6769.406331961833 8163.323089355652 10000.391462842217 3713.851331292558 3436.9521283901713 4700.871651899919 5191.234000349958 5049.100897897729 1.0627299589462789 1.2591193950788648 1.4765189190557342 1.3407152023403572 1.6167874745292925 1.9806281682756697 0.7355470620202653 0.6807057727488075 0.9310314344990015 1.0281501806611566 1.0 12.301810792204055 -7.788354301058889 24.999994236979514 0.9247279309091337 1.450120275647026 0.5941924395657474 0.23744371049428414 130.6355176421159 121340.67132118354 0.03822918759424331 0.052828744333324754 1.62796738138953e-08 7.788354301058889 0.5253923447378922 LS(ph)YSDSDLKR ddPTM_A549_MK2206_60min_R1 1 LSYSDSDLKR 10 1 A0A087WTF0;A2A3K4;A2A3K4-2 A0A087WTF0 PTPDC1 Protein tyrosine phosphatase domain-containing protein 1 1 LS(0.573)Y(0.001)S(0.425)DSDLKR 45.915 0.017112 3059700.0 1108.1 926.43 944.97 929.42 1412.8 1188.9 1126.1 1251.4 1403.5 1686.6 1745.5 True False 1295.1201895560603 973.581329897533 1078.9809554073984 1157.1279417232488 1204.9789915248432 1314.708608872051 1330.6977935254995 1428.7897822517702 1085.6094909289554 1305.5958886054277 1312.044176650744 0.9871010539158174 0.7420339552764105 0.8223663308058069 0.8819275770706517 0.9183981857995009 1.0020307488640423 1.014217217077532 1.0889799350346898 0.8274183981367087 0.9950853117905093 1.0 10.357600581113498 -6.673250991175991 2.7204243280639315 0.9442122908606846 0.8411566310773617 0.26566784723096915 0.08554258980679535 0.36452001426986125 5.456372172575612 0.014187929411342394 0.031960071326038876 2.1220177329425835e-07 6.673250991175991 -0.10305565978332287 LSAEYEKVELPS(ph)EEQVSGSQGPSEEKPAPLATEVFDEK ddPTM_A549_MK2206_60min_R1 2 LSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK 38 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 LS(0.003)AEY(0.002)EKVELPS(0.298)EEQVS(0.298)GS(0.298)QGPS(0.097)EEKPAPLAT(0.004)EVFDEK;LS(0.003)AEY(0.003)EKVELPS(0.707)EEQVS(0.19)GS(0.08)QGPS(0.016)EEKPAPLATEVFDEK 52.718 0.00083211 16560900.0 779.5799999999999 770.6 831.0899999999999 790.62 1607.46 1100.13 1253.31 1168.65 1278.8 1311.03 1485.6299999999999 True False 911.1540450989197 809.8202485012775 948.951059006671 984.3219354922808 1371.004763389386 1216.545026392809 1481.0202038925877 1334.3097163405248 989.1538418239734 1014.8674124501214 1116.7070696978776 0.815929324550108 0.7251859242911146 0.8497761720657929 0.8814504378114009 1.227721038571295 1.0894038906030588 1.3262387640236522 1.1948609913444168 0.8857773615524674 0.9088036065937071 1.0 10.125035077897865 -6.532937355102239 24.803469331731296 1.0218211520851108 0.8024238620879479 0.43444232172246067 0.1380785143099547 188.51457624624354 464856.33069268876 0.023259008202955872 0.04846083826385711 2.9313160430478826e-07 6.532937355102239 -0.2193972899971629 LSAEYEKVELPS(ph)EEQVSGSQGPSEEKPAPLATEVFDEK ddPTM_A549_PD325901_60min_R1 2 LSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK 38 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 LSAEYEKVELPS(0.996)EEQVS(0.003)GS(0.001)QGPSEEKPAPLATEVFDEK;LS(0.001)AEY(0.009)EKVELPS(0.648)EEQVS(0.152)GS(0.152)QGPS(0.038)EEKPAPLATEVFDEK 94.712 6.6052e-10 38153000.0 1323.81 1370.1 1542.13 1444.31 1732.6999999999998 1805.57 1142.44 1595.44 1790.3400000000001 1966.92 1315.4 True False 1458.202216662586 1485.5631353663687 1646.7882153810262 1533.5217484339964 1611.001129490495 1790.8660365548246 1185.916179367155 1563.6176976015336 1715.0982358750596 1842.728335523333 1153.6141390076205 1.264029424879434 1.2877469902061902 1.4275034950574128 1.329319480908223 1.396481782787731 1.5523960534112304 1.0280007320188724 1.3554078826969065 1.4867174195268165 1.5973524189886514 1.0 10.17194503652334 -10.923190100942783 1.1294731687925543 0.9962029028184954 1.357665645072832 0.0 0.21780424638840323 0.334826021489609 0.7456477694399991 0.09639483647449812 0.021787272767388018 1.1934655820649277e-11 10.923190100942783 0.3614627422543365 LSAKPAPPKPEPK ddPTM_A549_MK2206_60min_R1 1 LSAKPAPPKPEPK 13 2 A0A087WZE9;Q15651-2;Q15651;P05204 A0A087WZE9;Q15651;P05204 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 0 76.58800000000001 0.00032694 7130200.0 4822.6 5482.4 2385.1 2199.8 5366.0 5035.8 2036.8 2212.4 5711.2 6210.4 3207.7 False True 5636.536978750169 5761.430742776287 2723.3430444799137 2738.7510987527753 4576.668508297218 5568.685013506498 2406.860195233759 2526.014475190839 4417.622318912324 4807.466326689877 2411.139561983725 2.3377066461108544 2.389505291861316 1.1294837874251165 1.1358741492755042 1.898135048031745 2.309565610098884 0.9982251683737273 1.047643411032003 1.8321719690409786 1.993856516017934 1.0 11.23549944433523 -2.0000000006366534 0.04752692282233681 2.7089741389967166e-10 4.671212608537254 0.06781006407240442 0.5377792276977067 536.2173868497161 1.87535841648402 44.487405931669166 185.75567237573088 0.009999999985340513 2.0000000006366534 4.671212608266357 LSAKPAPPKPEPK ddPTM_A549_PD325901_60min_R1 2 LSAKPAPPKPEPK 13 2 A0A087WZE9;Q15651-2;Q15651;P05204 A0A087WZE9;Q15651;P05204 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 0 ; 91.441 6.0561000000000005e-05 41389000.0 19118.8 20157.6 4877.4 5245.7 18556.1 19481.4 5030.6 5901.0 18012.9 20446.8 5424.7 False True 21059.726501483325 21856.351695103338 5208.409694188827 5569.714975150912 17252.78355106975 19322.749937437588 5222.042235849944 5783.299925755055 17255.880454547103 19155.78555852728 4757.496290006565 4.426640656708587 4.594086965661759 1.0947795598137273 1.1707239765694546 3.626441829773018 4.061537573455664 1.0976450463701228 1.2156183784952723 3.6270927821413586 4.026442563657963 1.0 12.215986816118564 -11.003685927261444 1.2157020137703056 0.9758610255968563 2.7920819435815574 0.0 1.608959433448164 0.6884725092027167 1.7706058203460904 1.0651645698163041 0.22900712881812932 9.9154875311103e-12 11.003685927261444 1.816220917984701 LSALGRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LSALGRSPR 9 1 B9ZVR7;Q15772-1;Q15772;C9J8D8 B9ZVR7 SPEG Striated muscle preferentially expressed protein kinase 1 LSALGRS(1)PR;LSALGRS(1)PR 62.408 0.0020059 4617500.0 1469.02 1491.3400000000001 1221.3600000000001 1416.06 1661.56 1327.51 1287.71 1218.06 1485.88 1999.36 1993.31 True False 1716.9546619092544 1567.2428359718344 1394.5672134526808 1762.994763569348 1417.1467250552225 1467.98622707018 1521.6702386117756 1390.7237351523022 1149.3305524627829 1547.7031873841736 1498.3161144426783 1.1459228432231752 1.0460027899751945 0.930756333733627 1.176650739170032 0.9458262588214584 0.9797573508820066 1.0155869138321216 0.9281911351995324 0.7670814865995711 1.0329617178013637 1.0 10.549126320091622 -7.835207210579182 1.230619408601778 0.8911560030370528 1.0493523122583024 0.1724369122032997 0.09635324436692781 0.4111481453674504 1.2591247125990124 0.01863075264256726 0.02937468733326314 1.4614797068978767e-08 7.835207210579182 0.1581963092212496 LSALGRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LSALGRSPR 9 1 B9ZVR7;Q15772-1;Q15772;C9J8D8 B9ZVR7 SPEG Striated muscle preferentially expressed protein kinase 1 LSALGRS(1)PR 57.598 0.0036664 6690000.0 1121.1 883.35 906.13 1390.8 1437.8 819.46 899.71 1201.6 874.07 919.24 1133.1 True False 1234.913246689801 957.793004617095 967.6254308023377 1476.7065572640252 1336.8138881407247 812.7865894510974 933.948956390203 1177.6331453630348 837.3358775603031 861.19902952152 993.7358833127066 1.242697649775017 0.9638305516594683 0.9737249575578096 1.4860151294338824 1.3452406324347845 0.817910073591789 0.9398362000140332 1.1850564774186179 0.8426141106719118 0.8666276864740324 1.0 9.956718650750242 -7.265747834166816 24.936359608454985 0.9400073948062361 1.1921165217184533 0.3761077935939692 0.1666834836747023 323.2380713729833 1870830.154520467 0.02594602986016241 0.042361329646887734 5.423156855423867e-08 7.265747834166816 0.2521091269122172 LSAMLVPVT(ph)PEVKPK ddPTM_A549_MK2206_60min_R1 1 LSAMLVPVTPEVKPK 15 1 Q5JSK7;Q5JSK8;Q5JSL0;Q5JSK6;P82970 Q5JSK7 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 1 LS(0.005)AMLVPVT(0.995)PEVKPK 41.202 0.03766 1379800.0 911.78 1394.6 1195.1 1152.4 1695.4 1474.4 1618.4 1214.8 1925.2 2022.2 1557.0 True False 1065.6661731192357 1465.5791831817842 1364.583150584019 1434.738051733202 1446.0089058828003 1630.420029372489 1912.4423310910815 1387.0016201689714 1489.1452739126632 1565.3836155211054 1170.3539289860842 0.9105503444094533 1.2522529697076024 1.165957678944353 1.2259009998592156 1.2355312953368944 1.3930999751374142 1.6340717826682505 1.1851129695190379 1.2723888364289582 1.3375301067064802 1.0 10.192729168639783 -10.559770090993515 0.8833173066833496 1.0021417210170935 1.2615418004544448 0.0 0.19102208160828799 0.6656425344419254 0.9390539049669446 0.10807421096733222 0.03101533868889018 2.755687136843348e-11 10.559770090993515 0.2594000794373512 LSAS(ph)PPK ddPTM_A549_MK2206_60min_R1 3 LSASPPK 7 0 Q8TEY7-3;Q8TEY7-2;Q8TEY7;H0YCV3 Q8TEY7-3 USP33 Ubiquitin carboxyl-terminal hydrolase 33 1 LS(0.348)AS(0.652)PPK;LS(0.002)AS(0.998)PPK;LS(0.016)AS(0.984)PPK 73.665 0.018935 57716100.0 7600.799999999999 7212.3 7010.1 7350.700000000001 11233.3 9147.5 7658.1 9543.2 13364.6 12505.099999999999 12743.5 True False 8883.629218281481 7579.375263775973 8004.237590083706 9151.621829985468 9580.89645066253 10115.48237838093 9049.47764194798 10895.97782482427 10337.53943888073 9680.189224830861 9578.937247292331 0.9274128213745849 0.7912542976433452 0.8356081038474551 0.9553901016078112 1.000204532436075 1.0560130124289375 0.9447266860951602 1.1374933923806865 1.0791948179640527 1.0105702725599492 1.0 13.225649887062865 -6.548852729037141 1.9920675180431784 1.0394674718854122 0.8443336639186866 0.670551104544596 0.055566233303973 0.14163403312844833 1.1167306483873551 0.00827589203058881 0.02183383569905108 2.8258380652361234e-07 6.548852729037141 -0.19513380796672564 LSAS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 LSASPPK 7 0 Q8TEY7-3;Q8TEY7-2;Q8TEY7;H0YCV3 Q8TEY7-3 USP33 Ubiquitin carboxyl-terminal hydrolase 33 1 LS(0.015)AS(0.985)PPK;LS(0.001)AS(0.999)PPK 100.09 0.011304999999999999 96574000.0 22969.0 21879.0 22376.0 20895.0 28891.0 21786.0 22218.0 23675.0 23739.0 24999.0 26727.0 True False 25300.7959711159 23722.820114357193 23894.569917818764 22185.636694011926 26861.79582853922 21608.58203912528 23063.518148156105 23202.783552321802 22741.33238459622 23420.558873643982 23439.748436412247 1.0793970779913586 1.0120765663809435 1.0194038550644162 0.9464963651038109 1.1459933497755048 0.9218777282420676 0.9839490475217008 0.9898904681194303 0.9702037735724552 0.9991813238601804 1.0 14.516669465884352 LSASTASELS(ph)PK ddPTM_A549_MK2206_60min_R1 5 LSASTASELSPK 12 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LSASTASELS(1)PK;LSASTAS(0.003)ELS(0.997)PK;LSASTAS(0.006)ELS(0.994)PK;LSASTAS(0.002)ELS(0.998)PK;LSASTAS(0.003)ELS(0.997)PK 198.52 1.5741000000000002e-24 197665800.0 17524.69 17802.53 16807.41 16065.779999999999 21985.74 16686.85 16528.739999999998 17030.08 23660.91 22994.1 25183.44 True False 20482.42923446549 18708.60273624637 19190.953469130076 20001.896821220274 18751.66677033366 18452.641391165438 19531.798106523973 19444.145992432663 18301.751663709172 17799.716839903987 18929.696820414447 1.0820262695584497 0.9883202522330076 1.0138014174867227 1.0566411607633108 0.9905951980229926 0.9747985700048541 1.0318072334608233 1.0271768310342624 0.9668275111502009 0.9403064934832 1.0 14.208363684453337 -2.000000000000096 0.30256768225496333 0.9873502061422398 1.563854072494644 0.32958613739454 0.03211807074587053 44.02004501196525 0.5505184243018055 0.009798278366548176 14.010443372390254 0.009999999999997792 2.000000000000096 0.5765038663524041 LSASTASELS(ph)PK ddPTM_A549_PD325901_60min_R1 4 LSASTASELSPK 12 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LSASTASELS(1)PK;LSASTAS(0.003)ELS(0.997)PK;LSASTAS(0.001)ELS(0.999)PK;LSASTAS(0.001)ELS(0.999)PK 194.24 2.8668999999999998e-21 423535000.0 20662.420000000002 19721.51 18883.61 18193.09 22790.000000000004 18409.83 20483.11 20305.47 19129.01 19164.0 21211.100000000002 True False 22760.05366753035 21383.510860345374 20165.165330971646 19316.835849794767 21189.30902123183 18259.906448239683 21262.605959837863 19900.461471516934 18325.084232624158 17953.9817694513 18602.269168241244 1.223509533255625 1.1495108831589433 1.0840164255551499 1.0384128772189507 1.1390711976906192 0.98159564745004 1.1430114126151063 1.0697867712554139 0.9850994019541277 0.9651500904042001 1.0 14.183190996479038 -2.0000000000000973 0.21901069905341053 0.9842303540738392 2.1426074324664284 0.5911968114426721 0.05176127689573809 22.5909645840686 0.2617824341778295 0.03243350885073666 9.367769483410918 0.00999999999999776 2.0000000000000973 1.158377078392589 LSAVS(ph)LR ddPTM_A549_MK2206_60min_R1 1 LSAVSLR 7 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 LSAVS(1)LR 58.981 0.031424 2539500.0 796.55 950.38 751.05 808.27 1280.0 598.24 794.91 899.16 1299.5 1272.4 1456.8 True False 930.9881662222541 998.7502825988117 857.5601834542115 1006.2961862846196 1091.7136956057464 661.5453597204274 939.3348575182976 1026.6186835620122 1005.165324875081 984.9639562798217 1095.0363543653991 0.8501892768316217 0.9120704336593578 0.7831339845800727 0.9189614411183575 0.9969657091781411 0.6041309560939732 0.8578115728976555 0.9375201832061213 0.9179287252591712 0.8994805992999501 1.0 10.096763051650221 -9.17603694732038 0.8387941792619318 0.9817367476001538 0.8512102304243562 0.12186660598720711 0.09893897195221148 0.5507180386115775 0.8248982225997852 0.02682926708216087 0.02199170841239153 6.667500434747203e-10 9.17603694732038 -0.13052651717579766 LSAVS(ph)LR ddPTM_A549_PD325901_60min_R1 1 LSAVSLR 7 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 LS(0.029)AVS(0.971)LR 47.198 0.060063 4546300.0 1399.9 1497.6 1559.3 1336.7 1481.0 1474.2 1330.7 1542.2 1612.7 1658.8 1514.5 True False 1542.0168174480887 1623.808007827656 1665.1234748326237 1419.2649231340383 1376.9796691726335 1462.1946039694526 1381.3405166869807 1511.4396111675046 1544.9238273153192 1554.06308490742 1328.2261012065076 1.1609595806371988 1.2225388481318455 1.2536445965939775 1.0685416600719069 1.0367057746582755 1.1008627240808273 1.0399889863873524 1.1379384954072 1.1631482214601656 1.1700290210347253 1.0 10.375285039271647 -14.999999999999998 0.23908484435861443 0.2253440134678594 1.1506541462519047 0.0 0.08211283156788816 40.36850610396139 0.5121924092011056 14.85442099252594 0.041051386338814826 1.000000000000004e-15 14.999999999999998 0.9253101327840453 LSCS(ph)LEDLR ddPTM_A549_MK2206_60min_R1 2 LSCSLEDLR 9 0 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 LS(0.015)CS(0.985)LEDLR;LS(0.01)CS(0.99)LEDLR 90.10799999999999 0.0010711 25569000.0 1782.39 1973.56 1424.6799999999998 1209.0 2217.42 2145.2799999999997 1787.1599999999999 1859.08 2748.2 1841.1100000000001 2343.87 True False 2083.213856748332 2074.0057742436834 1626.7210467526065 1505.2050542740724 1891.2404553985118 2372.2921056783866 2111.8638386262587 2122.610283193721 2125.7370879736045 1425.201972293573 1761.8223914788778 1.1824199004530063 1.1771934471230998 0.9233172734211496 0.85434551266578 1.0734569299071062 1.3464990098616463 1.1986814612190024 1.204781079784096 1.2065558357385024 0.8089362351089516 1.0 10.782852778813902 -7.005311697135287 24.98314331379747 1.1358261634617188 1.027508854255596 0.07052559215291299 0.15685587292864395 431.58666082479346 2029951.8204200428 0.02092649062604888 0.03876032588961847 9.878438555728577e-08 7.005311697135287 -0.10831730920612292 LSCS(ph)LEDLR ddPTM_A549_PD325901_60min_R1 2 LSCSLEDLR 9 0 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 LS(0.014)CS(0.986)LEDLR;LS(0.07)CS(0.93)LEDLR 99.34299999999999 0.00080878 37242000.0 4861.8 4912.200000000001 5250.6 4887.5 4146.1 4705.5 4264.5 4196.4 3331.9 4142.6 5597.5 True False 5355.366356932007 5326.168333367403 5606.9372904227375 5189.3897746821385 3854.8922392685054 4667.17996810355 4426.78788112394 4112.699509987885 3191.8718299943625 3881.035529019462 4909.042985476016 1.0909186113824 1.0849708077777076 1.1421650425574852 1.0571082367857771 0.7852634924309402 0.9507311265988001 0.901761890091636 0.8377803009987471 0.6502024609354395 0.7905890293692609 1.0 12.261226084216235 -6.673618221320928 5.261854914981735 0.8428365043877114 1.1024712349895054 0.6488903705480893 0.08825827760033546 0.14368704529003354 6.587245681698699 0.018542625921377218 0.03900334444812833 2.1202241584479452e-07 6.673618221320928 0.259634730601794 LSCS(ph)LEDLRSESVDK ddPTM_A549_MK2206_60min_R1 2 LSCSLEDLRSESVDK 15 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 LS(0.028)CS(0.972)LEDLRSESVDK;LSCS(0.998)LEDLRS(0.002)ESVDK 151.96 8.619499999999999e-15 44160000.0 12999.2 14294.3 12923.2 12102.0 14602.8 11771.8 11468.7 10285.599999999999 16990.4 18513.5 18635.0 True False 15193.147160073237 15021.818814108243 14755.904084702035 15066.990543279431 12454.747464212192 13017.484062511576 13552.414336742642 11743.615298328923 13142.101528093559 14331.287491815832 14007.4152001642 1.0846503043541635 1.0724190437313625 1.0534351894223184 1.07564388775331 0.8891538721623811 0.9293280649208556 0.9675171431045877 0.8383856072311799 0.9382246003487855 1.0231214886560824 1.0 13.773903138176957 -6.743031617242663 24.94043359843947 0.9518543794681591 1.0703071578155245 0.6242354823987807 0.04830338328566924 137.18379805940074 185867.47707778984 0.007159750807351581 0.014882579393537286 1.8070425660085542e-07 6.743031617242663 0.11845277834736545 LSCS(ph)LEDLRSESVDK ddPTM_A549_PD325901_60min_R1 4 LSCSLEDLRSESVDK 15 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2;E9PI79 E9PP16 PPFIBP2 Liprin-beta-2 1 LS(0.009)CS(0.991)LEDLRSESVDK;LS(0.043)CS(0.957)LEDLRSESVDK;LS(0.001)CS(0.999)LEDLRSESVDK;LS(0.002)CS(0.998)LEDLRSESVDK 177.41 3.1275e-28 94611000.0 23761.9 24240.2 27528.6 22655.9 21935.0 21817.5 23059.4 25372.8 17123.7 22752.3 24658.8 True False 26174.190595413755 26283.006724989304 29396.856338919642 24055.303487717872 20394.36127164196 21639.82551356907 23936.938085587863 24866.71959942345 16404.0504382708 21315.71589506818 21625.923925012245 1.2103154846087778 1.215347229377365 1.3593341232889313 1.1123364518958583 0.9430515589696551 1.0006428205613331 1.1068631411351046 1.1498569811698518 0.7585363980356049 0.9856557328593355 1.0 14.400474149920049 -6.888639199040106 0.5970580874647029 0.9037309558810929 1.290914066839074 0.41677560022734095 0.11820659000078038 0.6587956087307435 0.39680435534253333 0.028431119285227485 0.12393283591272337 1.2922924319064425e-07 6.888639199040106 0.3871831109579811 LSDALAVEDDQVAPVPLNVVETSS(ph)SVRER ddPTM_A549_PD325901_60min_R1 2 LSDALAVEDDQVAPVPLNVVETSSSVRER 29 1 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 LSDALAVEDDQVAPVPLNVVET(0.148)S(0.148)S(0.352)S(0.352)VRER;LSDALAVEDDQVAPVPLNVVET(0.218)S(0.218)S(0.309)S(0.255)VRER 73.509 3.4289e-06 7218000.0 1584.81 1864.1100000000001 1315.42 1404.3600000000001 2240.0 1616.25 1968.29 1638.28 1201.68 1652.3000000000002 1826.0900000000001 True False 1745.6987445245402 2021.2050917946137 1404.6923114630479 1491.1041276670303 2082.6701275804876 1603.0877958659796 2043.1943530396168 1605.6032201942028 1151.177568554767 1547.9734960167189 1601.4925065382579 1.0900449033620485 1.2620758970415635 0.8771145077034372 0.9310715607968469 1.3004557430507933 1.000996126626387 1.275806377299966 1.0025668016797846 0.7188154573655301 0.9665817914832306 1.0 10.64520133234984 -8.528382228531905 24.33573585669898 0.86687484540835 1.1022422304069595 0.2809416193922136 0.14614025422142865 93.84152153178175 414953.08143586986 0.02654599650926677 0.030150000676382363 2.962223148684515e-09 8.528382228531905 0.23536738499860943 LSDDFDS(ph)PVKGPLCK ddPTM_A549_MK2206_60min_R1 2 LSDDFDSPVKGPLCK 15 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LS(0.001)DDFDS(0.999)PVKGPLCK;LSDDFDS(1)PVKGPLCK 79.311 0.0001274 14832800.0 8210.8 8942.8 8816.7 8669.0 11511.5 9742.0 8173.200000000001 8675.2 13288.5 12805.2 12873.400000000001 True False 9596.582305213338 9397.950322212857 10067.040635724316 10792.905389166193 9818.173599191843 10772.891973783775 9658.164644385592 9904.936166685764 10278.675967374007 9912.496426402358 9676.579492234714 0.9917329065414517 0.9712058201717402 1.0403511534011516 1.1153636879464806 1.0146326609594594 1.1132954555304209 0.9980969672326983 1.023598904409797 1.0622220357536942 1.024380199052461 1.0 13.24028145389099 -5.76654804813389 24.87028086982594 1.0383500163194697 0.9814693569854179 0.2699279633973609 0.03861085587122407 115.72127566652499 563373.9455513089 0.005523827410417184 0.017953705520388188 1.711795781842237e-06 5.76654804813389 -0.05688065933405173 LSDDFDS(ph)PVKGPLCK ddPTM_A549_PD325901_60min_R1 2 LSDDFDSPVKGPLCK 15 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LS(0.001)DDFDS(0.999)PVKGPLCK;LS(0.004)DDFDS(0.996)PVKGPLCK 79.013 0.00011040000000000001 9035200.0 4591.1 4238.1 5796.9 4158.2 4782.5 4851.9 5146.9 5405.0 4384.3 4464.4 5072.0 True False 5057.185092210813 4595.259560613245 6190.312493591508 4415.042570042616 4446.593698729322 4812.387735042319 5342.768095991746 5297.19303485953 4200.043117813946 4182.5170221007265 4448.176154057054 1.1369120549774765 1.033066003112768 1.3916518319413904 0.992551197869217 0.9996442462544364 1.0818788573948623 1.2011143243773654 1.190868538339722 0.9442169042660793 0.9402768409443435 1.0 12.118998206615682 -8.769641628139855 24.995775693610238 0.9736579737991095 1.1260989225743536 0.32108931055473877 0.10769021706966705 164.09202568749484 500057.4145408366 0.018371963648095586 0.019718847276453406 1.6996455903980695e-09 8.769641628139855 0.15244094877524417 LSDEEMATILSFNR ddPTM_A549_MK2206_60min_R1 4 LSDEEMATILSFNR 14 0 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ;;; 164.9 8.0631e-20 24711600.0 10107.5 11149.599999999999 9804.0 10189.7 14384.4 11132.599999999999 10819.2 9871.5 16892.2 13426.300000000001 16453.9 False True 11813.398895350498 11717.067016207951 11194.354621643146 12686.176957433023 12268.473814899451 12310.644342778198 12784.908594006825 11270.815355200859 13066.143671300388 10393.289505029677 12367.942525461869 0.9551628228406032 0.9473739865855649 0.9051104982576804 1.0257305878739333 0.9919575377749661 0.995367201734184 1.0337134545771496 0.9112926690916977 1.0564524895229044 0.840341025488518 1.0 13.594317899653841 -6.271083376372559 24.82684112784522 1.0146903587337341 0.9370315904865728 0.0 0.064580639915889 421.39185521852414 1084802.2099046693 0.005597428091197978 0.013162196596276796 5.35693804505299e-07 6.271083376372559 -0.07765876824716134 LSDEEMATILSFNR ddPTM_A549_PD325901_60min_R1 3 LSDEEMATILSFNR 14 0 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ;; 125.72 2.9454e-07 22606200.0 10355.3 10502.3 10065.400000000001 11215.0 12474.9 11211.099999999999 10524.7 12408.3 10806.300000000001 12241.0 11814.900000000001 False True 11406.562432831048 11387.36567882505 10748.498572167191 11907.725078887 11598.706060068671 11119.800518628363 10925.223217836825 12160.806722376961 10352.148790920519 11468.101170937867 10361.742200821905 1.1008344168151825 1.0989817598358884 1.0373254192055277 1.1492010559713082 1.1193779805821311 1.0731593493752747 1.0543809145309775 1.1736256786443067 0.9990741508797019 1.1067734507067937 1.0 13.338978974578735 -8.796089466556454 24.708872687593267 0.9995627436257074 1.098436201797412 0.1721728770438372 0.04906768935263375 72.40753085112566 51633.24528704233 0.0060505720905941396 0.0064414906903870195 1.5992285466264882e-09 8.796089466556454 0.09887345817170468 LSDGVAVLK ddPTM_A549_MK2206_60min_R1 2 LSDGVAVLK 9 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 140.5 0.00011401 16260800.0 7003.9 8004.4 8622.1 6644.2 10321.2 8145.4 7686.0 7649.4 12078.0 10111.0 11109.9 False True 8185.987091085368 8411.78977044333 9844.843429546037 8272.029298269468 8802.965152410961 9007.340821521078 9082.446710804532 8733.725875305012 9342.352284602714 7826.918077605524 8351.005212358701 0.9802397295802041 1.0072787115489612 1.1788812459339142 0.9905429451807364 1.0541204236567117 1.0785936054968643 1.087587240080196 1.0458292927874024 1.1187099094102961 0.9372426287104243 1.0 13.027734150224836 -5.54034020672541 24.99589316670734 1.0626818726599112 0.986999342833735 0.11925431592397462 0.0623669070095136 235.73442455226916 337451.3739211084 0.007488587077192255 0.029014575451970323 2.881773167472154e-06 5.54034020672541 -0.07568252982617618 LSDGVAVLK ddPTM_A549_PD325901_60min_R1 2 LSDGVAVLK 9 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 114.89 0.00058711 32719000.0 5702.700000000001 6185.6 6190.3 5902.700000000001 7077.0 7149.5 6658.1 6902.9 6458.799999999999 6776.9 6787.700000000001 False True 6281.633905894147 6706.882220365088 6610.410983297884 6267.29637299566 6579.935934324598 7091.276842409168 6911.477638952117 6765.216244279712 6187.359097082021 6349.005377447007 5952.855930775447 1.0552302926430595 1.1266663091393543 1.1104604344820388 1.0528217793067356 1.1053410347640422 1.1912394529402672 1.1610355969175614 1.1364656432057214 1.03939338849009 1.0665477967681902 1.0 12.539366263780183 -8.890547904476247 3.7289361447007634 1.0164890398706707 1.118787318398269 0.4229177659050827 0.04159444437644126 0.12623041630463758 3.1949765775208068 0.0075795480964730225 0.007959055981770938 1.2866253251113535e-09 8.890547904476247 0.10229827852759832 LSDLDSETR ddPTM_A549_MK2206_60min_R1 2 LSDLDSETR 9 0 Q9Y266 Q9Y266 NUDC Nuclear migration protein nudC 0 ; 111.04 0.00093299 3573000.0 1497.78 1594.9299999999998 1341.74 1330.0 1867.1599999999999 1570.82 1304.21 1589.43 2664.0 2139.8 2047.9299999999998 False True 1750.5686467947623 1676.1051245031713 1532.0189075931746 1655.8500597059694 1592.5032374118964 1737.0431297740743 1541.1680750323158 1814.7365699252287 2060.6082535338323 1656.4176938443575 1539.372461007367 1.1371962868877024 1.0888236388263866 0.995223018729736 1.0756656375562152 1.0345145685987915 1.1284099032389805 1.0011664584565672 1.1788807555629928 1.3386027785539103 1.076034381413057 1.0 10.588126627852356 -8.282514171101404 23.32827922029363 1.165787315332062 1.065601354575282 0.15886355785179973 0.08809102834558256 555.8336169715346 615265.834489554 0.02064607296993132 0.024976820446081172 5.217780782554742e-09 8.282514171101404 -0.10018596075677988 LSDLDSETR ddPTM_A549_PD325901_60min_R1 1 LSDLDSETR 9 0 Q9Y266 Q9Y266 NUDC Nuclear migration protein nudC 0 103.56 0.0017888 2444300.0 1460.6 1417.8 1659.1 1662.6 1929.8 1904.0 1324.3 1785.6 1657.7 1553.4 2031.2 False True 1608.879036763111 1537.2829817695322 1771.6965029787762 1765.2950259614372 1794.2575054485817 1888.4944552691873 1374.6969611847662 1749.9848072238985 1588.032633807033 1455.3180588950984 1781.3752768376755 0.903166815932922 0.862975366144376 0.9945666845247334 0.9909731256039523 1.0072316197369569 1.0601328534331471 0.7717054228040872 0.9823785195506352 0.8914643952093759 0.8169632069210038 1.0 10.798775761236419 -6.917488083265056 0.004419270676432809 1.876778806176526 1.3942338917970194e-06 0.0 0.0892180378868612 59872.814178907305 73.30196654065271 15296.606097309228 15834.211504629786 1.209238363137656e-07 6.917488083265056 -1.8767774119426341 LSDRLGS(ph)PVDNLEDMDRDDLTDDSVFTR ddPTM_A549_PD325901_60min_R1 2 LSDRLGSPVDNLEDMDRDDLTDDSVFTR 28 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 LS(0.029)DRLGS(0.971)PVDNLEDMDRDDLTDDSVFTR;LS(0.199)DRLGS(0.801)PVDNLEDMDRDDLTDDSVFTR 103.01 2.8241e-15 7444500.0 1276.18 1664.79 1355.4499999999998 1658.84 1466.11 1922.65 1737.02 1825.5700000000002 1586.0900000000001 1446.23 1558.17 True False 1405.736854125939 1805.0876958810125 1447.4389879829919 1761.3027793010172 1363.1354914049218 1906.992575852577 1803.1232466338151 1789.15757421804 1519.4321530765499 1354.9147909848434 1366.5249680534466 1.0286945990663807 1.320932831876668 1.0592115195998237 1.2888917659586665 0.9975196379665474 1.3955051099937106 1.319495280940445 1.3092754366329762 1.1118949075924407 0.9915038675911342 1.0 10.41629610453624 -9.213738800892063 1.8639940654977223 1.0364470266530479 1.2165211359148531 0.28160952331732214 0.1291604608284743 0.28462372447406736 2.0433592820485633 0.025597287255372397 0.023474750687106548 6.113095762233632e-10 9.213738800892063 0.18007410926180523 LSDS(ph)PSMKK ddPTM_A549_MK2206_60min_R1 3 LSDSPSMKK 9 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 LS(0.117)DS(0.872)PS(0.012)MKK;LS(0.06)DS(0.605)PS(0.335)MKK;LS(0.009)DS(0.897)PS(0.093)MKK 57.836000000000006 0.005291399999999999 45809000.0 10767.9 11732.900000000001 10882.5 9965.5 15103.7 11236.7 10626.3 10608.599999999999 16486.5 16765.4 17283.8 True False 12585.258270120663 12330.054494732221 12425.802138926101 12407.047947368295 12881.965737750406 12425.760135682214 12556.961160944868 12112.401537474936 12752.334073530606 12978.084495924013 12991.755451387078 0.9687111427868652 0.9490676253004585 0.956437502647069 0.9549939570363175 0.9915492779980746 0.9564342695779088 0.9665330607500167 0.9323144653389964 0.9815712835149687 0.9989477206899238 1.0 13.665308761058974 LSDS(ph)PSMKK ddPTM_A549_PD325901_60min_R1 1 LSDSPSMKK 9 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 LS(0.007)DS(0.972)PS(0.022)MKK 71.176 0.0013477 15313000.0 4087.0 4402.1 3863.6 4899.3 4816.5 5598.9 5009.7 5608.0 4541.5 5003.2 5358.5 True False 4501.90923130962 4773.080416171295 4125.807129714184 5201.918633882393 4478.205656022954 5553.3044147093815 5200.346874913025 5496.144040609109 4350.636548491672 4687.297098148545 4699.4384703301885 0.9579674805260957 1.0156703713233066 0.8779361950927511 1.106923447710743 0.952923564016428 1.1816953131251868 1.10658899094973 1.169532078206557 0.9257779575069085 0.9974164206514676 1.0 12.198272666033667 -4.373261259591811 16.33262902303024 1.0026916767773202 1.013144719868636 0.0 0.09894774769023791 0.0 0.0 0.01351173388544807 0.0 4.233881907567092e-05 4.373261259591811 0.010453043091315894 LSDSYSNT(ph)LPVR ddPTM_A549_MK2206_60min_R1 2 LSDSYSNTLPVR 12 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 LSDSYS(0.001)NT(0.999)LPVR;LSDSYSNT(1)LPVR 171.2 1.1503e-15 74774000.0 5135.1 6218.5 5472.9 5407.0 7649.1 5595.700000000001 5614.8 5251.0 8197.9 7247.299999999999 8391.5 True False 6001.779338858702 6534.995088638977 6249.039515380536 6731.715242729451 6523.927522701498 6187.833259874958 6634.9364808515875 5995.345330513063 6341.088739356234 5610.129896531551 6307.658956381969 0.9515066335008834 1.036041284703098 0.9907066248497594 1.0672287911061569 1.0342866613136579 0.9810031427926562 1.0518857355371893 0.9504866023942349 1.0052998716648183 0.8894155399532704 1.0 12.622888943009029 -8.229277576001007 24.996456318114795 0.9986714171082981 1.0172016503283827 0.07573847011641877 0.04765883552272686 1497.3852443121398 1163781.9861680018 0.005110488367422457 0.006597312531545675 5.898239781831199e-09 8.229277576001007 0.018530233220084624 LSDSYSNT(ph)LPVR ddPTM_A549_PD325901_60min_R1 2 LSDSYSNTLPVR 12 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 LSDSYSNT(1)LPVR;LSDSYSNT(1)LPVR 186.51 2.7028000000000006e-19 103460000.0 9853.0 8324.2 9814.4 9900.7 9636.400000000001 9041.7 9316.0 10296.8 9833.900000000001 9701.8 10446.8 True False 10853.269306604761 9025.709547782439 10480.464202781575 10512.243752878867 8959.572507775274 8968.067392966079 9670.525477910807 10091.422246316662 9420.615381308435 9089.226692280452 9161.909827721458 1.1846077412556177 0.9851340732991156 1.1439169779940999 1.1473856379891083 0.9779153774976079 0.9788425733935009 1.0555141514982407 1.1014540020665509 1.0282370770343323 0.9920668139276937 1.0 13.161432648463297 -2.0000000000026477 0.18622969535519118 1.0005543813054893 1.5439052824293549 0.26978199773351985 0.06296040520782685 54.68809399158319 0.58538145975569 0.05958984243970392 8.589714610086936 0.009999999999939035 2.0000000000026477 0.5433509011238655 LSDSYSNT(ph)LPVRK ddPTM_A549_MK2206_60min_R1 4 LSDSYSNTLPVRK 13 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 LSDSYSNT(1)LPVRK;LSDSYS(0.004)NT(0.996)LPVRK;LSDSYS(0.006)NT(0.993)LPVRK;LSDSYS(0.027)NT(0.973)LPVRK 145.69 1.0919e-12 278199100.0 9466.1 8867.3 9973.4 9158.5 12851.5 10269.8 9718.0 9081.699999999999 14659.9 14586.8 15063.000000000002 True False 11063.746256074934 9318.607694699436 11387.778088891857 11402.332911140686 10961.061374279114 11356.543419458483 11483.6348081705 10369.058786539803 11339.456057049792 11291.631749027421 11322.441382348992 0.977152001274447 0.8230210587997909 1.005770549330882 1.007056033773444 0.968082854583531 1.0030118978723666 1.0142366315159554 0.9157970826596236 1.0015027390406566 0.9972788878050982 1.0 13.466897449949766 -5.7913860272731625 24.99978900833247 0.9946183301561443 0.9000864337114671 0.40138943824541606 0.042225524503921086 106.25202568061121 88700.28707982833 0.00512355504636586 0.015932756130510418 1.6166424289892024e-06 5.7913860272731625 -0.09453189644467719 LSDSYSNT(ph)LPVRK ddPTM_A549_PD325901_60min_R1 4 LSDSYSNTLPVRK 13 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 LSDSYS(0.002)NT(0.998)LPVRK;LSDSYS(0.003)NT(0.997)LPVRK;LSDS(0.001)YS(0.014)NT(0.985)LPVRK;LSDSYS(0.034)NT(0.966)LPVRK 163.27 2.6289999999999996e-18 397671900.0 9836.7 9942.0 10063.0 10867.7 11301.399999999998 11803.0 11056.5 11309.1 11635.0 11379.8 11269.400000000001 True False 10835.31454260419 10779.847231452035 10745.935693734817 11538.973146662529 10507.628651713441 11706.880281272171 11477.261157848947 11083.531128682675 11146.021411802398 10661.277485911178 9883.33524261249 1.0963216643595368 1.090709458581774 1.0872782749899228 1.1675181366824101 1.0631662686508174 1.1845070508989088 1.161274091802954 1.1214363225174717 1.1277591155408524 1.0787125220588039 1.0 13.270782262301829 -10.599867012262806 0.8105359944599996 0.9972327417091545 1.1230221436062375 0.31137377376646025 0.04201165994717034 0.347644399245702 0.3944851882225243 0.02690851391022089 0.006770719773568604 2.5126557280524334e-11 10.599867012262806 0.125789401897083 LSDT(ph)PAPK ddPTM_A549_MK2206_60min_R1 2 LSDTPAPK 8 0 I3NI13;I3L270;J3KNE2;H3BNM4;Q8NBZ0-2;Q8NBZ0 I3NI13 INO80E INO80 complex subunit E 1 LS(0.084)DT(0.916)PAPK;LS(0.024)DT(0.976)PAPK 100.48 0.0025120999999999997 49955000.0 11076.4 12390.8 11916.8 11281.3 16514.9 12274.9 12384.7 13141.400000000001 18987.2 16964.6 16767.7 True False 12945.82552801981 13021.438794614109 13606.781431578645 14045.219006436799 14085.580087155742 13573.821770580818 14634.839679846596 15004.233693849617 14686.629516327936 13132.285077573599 12603.817325022446 1.0271352872052797 1.0331345225674253 1.0795762173230652 1.1143623113731367 1.1175646015744407 1.0769611634748637 1.161143429998144 1.190451535985182 1.1652524895906313 1.0419291821615013 1.0 13.62157312929094 -5.829497473064737 3.24041736601301 1.0982467130371865 1.0278669242150467 0.22820183015246331 0.052986982966282584 0.3982771765489947 8.256539247793873 0.00996341854104089 0.039110257852995836 1.4808208713742031e-06 5.829497473064737 -0.0703797888221398 LSDT(ph)PAPK ddPTM_A549_PD325901_60min_R1 2 LSDTPAPK 8 0 I3NI13;I3L270;J3KNE2;H3BNM4;Q8NBZ0-2;Q8NBZ0 I3NI13 INO80E INO80 complex subunit E 1 LS(0.005)DT(0.995)PAPK;LS(0.037)DT(0.963)PAPK 111.61 0.0015932000000000001 40560000.0 12748.9 12314.0 12430.5 12272.9 15066.1 13004.4 13479.6 13443.400000000001 14326.3 15315.7 16030.6 True False 14043.158942755867 13351.743995986759 13274.10848066884 13030.96915922177 14007.909111223375 12898.496477995071 13992.573554320148 13175.260840856721 13724.215432050258 14348.664088206293 14058.937826346024 0.9988776617561685 0.9496979189257096 0.9441757723541221 0.9268814842329075 0.9963703719475149 0.9174588178221885 0.9952795671447162 0.9371448258464221 0.9761914876905916 1.020607976608114 1.0 13.779199980321991 -9.513881602161625 0.7197995302570465 0.9974411800829037 0.9566416203930553 0.3046542206468218 0.028043829158865583 0.5464075363795164 0.6138645912311606 0.009287272540280833 0.005743706272185539 3.062798303319408e-10 9.513881602161625 -0.040799559689848386 LSEEAECPNPST(ph)PSK ddPTM_A549_MK2206_60min_R1 2 LSEEAECPNPSTPSK 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 LSEEAECPNPS(0.007)T(0.987)PS(0.007)K;LSEEAECPNPS(0.012)T(0.909)PS(0.079)K 250.52 1.5658e-76 69862000.0 13405.8 13684.6 12531.2 11541.2 16403.9 11937.4 11335.099999999999 10402.7 15825.0 14910.7 15315.8 True False 15668.37129965765 14381.087688347508 14308.312590242216 14368.794518104158 13990.908040114939 13200.607744595198 13394.540946089048 11877.314581932631 12240.66276733217 11542.3625140691 11512.464165423933 1.3609919713553071 1.249175457287336 1.2428540392955334 1.2481076433018408 1.2152835256707823 1.146636163632228 1.163481662450483 1.0316917743470138 1.0632530613294136 1.0025970416251078 1.0 13.490909045230174 -7.135269694514461 0.35318441306556775 1.001389356242567 1.368515578672684 0.9258289452931898 0.03097651919378936 0.3555304743929257 0.07485884909138973 0.012270892379935045 0.048332476401741986 7.323695943559203e-08 7.135269694514461 0.36712622243011683 LSEEAECPNPST(ph)PSK ddPTM_A549_PD325901_60min_R1 2 LSEEAECPNPSTPSK 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 LSEEAECPNPS(0.323)T(0.611)PS(0.066)K;LSEEAECPNPS(0.08)T(0.913)PS(0.007)K 234.63 1.3309999999999998e-56 46629000.0 11424.1 13904.4 14199.099999999999 13193.599999999999 13020.2 13512.3 13576.8 14919.8 13662.6 18695.0 23742.0 True False 12583.866222022085 15076.172585496053 15162.736312124605 14008.53870716036 12105.706069251542 13402.260308788791 14093.472553510022 14622.212884643332 13088.408434971332 17514.594509491344 20821.88451293821 0.6043576994293085 0.724054183286248 0.7282115268050234 0.6727795795071189 0.5813933922133394 0.6436622151304775 0.6768586457557519 0.7022521364748443 0.6285890418246493 0.8411627918985048 1.0 14.345813027170133 -10.749335717918516 0.7579920957602562 1.0261913387914416 0.6614675456583329 0.6900719039162464 0.06349731739369656 0.206767166925249 0.18608127222025772 0.04713728088228728 0.00914175212517884 1.7810014870632316e-11 10.749335717918516 -0.36472379313310876 LSEGPAAMAGPGS(ph)PPR ddPTM_A549_MK2206_60min_R1 4 LSEGPAAMAGPGSPPR 16 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 LSEGPAAMAGPGS(1)PPR;LSEGPAAMAGPGS(1)PPR;LSEGPAAMAGPGS(1)PPR;LSEGPAAMAGPGS(1)PPR 101.39 1.2235e-06 20210500.0 10909.1 11757.7 9990.3 10133.599999999999 13918.699999999999 10308.4 10534.4 10800.8 16118.4 15147.9 15729.800000000001 True False 12750.289378112102 12356.116708802849 11407.07476301525 12616.332454914585 11871.277667990391 11399.228045837885 12448.36412051774 12331.846476062745 12467.608135795701 11725.978869326551 11823.6565396052 1.0783710889607627 1.0450334604539713 0.9647670942407246 1.0670415207557995 1.0040276143192826 0.964103448679719 1.0528353964630133 1.0429807762729983 1.0544629822452543 0.991738793329165 1.0 13.529388646517162 -14.99996281007331 0.002796760832162776 0.23148007052373173 1.7899444566114842 0.056244383624728056 0.03760504277528107 482964.57998866885 105.47474036877459 30617.05882988072 28204.280301577317 1.000085636637414e-15 14.99996281007331 1.5584643860877525 LSEGPAAMAGPGS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 LSEGPAAMAGPGSPPR 16 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 LSEGPAAMAGPGS(1)PPR 108.66 2.1956e-07 11244000.0 6373.3 6170.4 5282.9 5847.4 6699.0 6695.7 6476.4 6636.2 6494.1 7403.5 7463.6 True False 7020.312724224513 6690.401263020686 5641.429362658414 6208.58061759107 6228.485350295388 6641.17243915226 6722.862946022059 6503.835785001814 6221.175560841076 6936.041746510785 6545.624515658562 1.072519926468497 1.022118095380477 0.8618626609520427 0.948508519353469 0.9515494412176397 1.014597220366846 1.0270773903910169 0.9936157763775205 0.9504326968280363 1.0596455280803627 1.0 12.676315130409508 -7.212196990753134 24.807695348462286 0.9840490822338158 0.966786967012022 0.004572059801657313 0.057042130094316 1480.8197584089874 746018.2511590328 0.008126973519337383 0.014076330266455292 6.134836732305921e-08 7.212196990753134 -0.017262115221793772 LSEGPAAMAGPGS(ph)PPRR ddPTM_A549_MK2206_60min_R1 3 LSEGPAAMAGPGSPPRR 17 1 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 LSEGPAAMAGPGS(1)PPRR;LSEGPAAMAGPGS(1)PPRR;LSEGPAAMAGPGS(1)PPRR 69.259 0.00064249 31010400.0 5564.1 6221.200000000001 5926.099999999999 5570.0 8151.0 6147.0 5790.5 6388.799999999999 9258.4 8858.400000000001 9082.2 True False 6503.184050815697 6537.832507106348 6766.510090097865 6934.650250046798 6951.998697564405 6797.471459951632 6842.5588965539455 7294.431964879423 7161.387182626741 6857.281287574005 6826.839084031735 0.9525907921320307 0.9576661214116815 0.9911629682212691 1.0157922524155047 1.0183334647253401 0.9956982105893201 1.0023026487557 1.0684933210072882 1.0490048314420546 1.0044591945360886 1.0 12.737002031061184 -5.779218611120939 0.853723860418483 1.0244756994603779 0.9312017973756485 0.5774806807727538 0.021071853520100704 0.7529437514181361 0.6285919197435995 0.003930347676792981 0.055370028572312976 1.6625755478703775e-06 5.779218611120939 -0.09327390208472941 LSEGPAAMAGPGS(ph)PPRR ddPTM_A549_PD325901_60min_R1 2 LSEGPAAMAGPGSPPRR 17 1 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 LSEGPAAMAGPGS(1)PPRR;LSEGPAAMAGPGS(1)PPRR 72.77199999999999 0.00018543 29797000.0 5104.4 5052.6 4664.3 5262.5 5346.5 5588.9 4807.7 5263.5 6023.1 5940.0 6342.299999999999 True False 5622.594930339325 5478.40033410124 4980.847446714428 5587.552672995346 4970.980284423694 5543.38585139389 4990.6596543743835 5158.515363364132 5769.970052894459 5564.947386273258 5562.237307152219 1.010851321123875 0.9849274728096954 0.8954755382892043 1.0045512919433652 0.8937015826404502 0.9966108141890875 0.8972396139871863 0.9274173463852469 1.0373469764540837 1.0004872282449284 1.0 12.441449581764578 -8.763002065273914 24.999509004399922 1.0176360739718289 0.9501610404551223 0.28329288161890076 0.04316739441775281 32.88440131753014 526073.9932192788 0.00704622262330057 0.007695240520441701 1.7258296848412473e-09 8.763002065273914 -0.06747503351670658 LSEGS(ph)QPAEEEEDQETPSR ddPTM_A549_MK2206_60min_R1 2 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LSEGS(1)QPAEEEEDQETPSR;LSEGS(1)QPAEEEEDQETPSR 225.11 9.778199999999998e-75 32434000.0 734.27 1254.85 1081.49 1080.67 1688.37 1432.1399999999999 1249.5700000000002 1207.65 1876.53 1814.12 1861.0100000000002 True False 858.1968248220636 1318.7165051022953 1234.8615442432526 1345.4341985131202 1440.013009570214 1583.6881042224065 1476.6006943039315 1378.838085773015 1451.4989512026439 1404.3090320389408 1398.8698557369246 0.6134929717031936 0.9427013525912283 0.8827565617908949 0.9618008372940066 1.0294117095057533 1.1321196877089896 1.0555668836870162 0.9856800331483612 1.0376225817218674 1.00388826471577 1.0 10.45004603185614 -4.7412360411019465 0.8981767292683923 1.0246152585837371 8.161248042540242e-17 0.8245841624642083 0.053496938193346076 1.4293729465653255 0.4507063474211716 0.00813894382806819 1.795334000588348 1.814529189537041e-05 4.7412360411019465 -1.0246152585837371 LSEGS(ph)QPAEEEEDQETPSR ddPTM_A549_PD325901_60min_R1 2 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LS(0.001)EGS(0.999)QPAEEEEDQETPSR;LSEGS(1)QPAEEEEDQETPSR 278.82 2.713399999999999e-126 44694000.0 2084.98 2246.5 2030.33 2158.0 2442.68 1703.46 1785.24 2197.62 2615.3999999999996 2405.59 2116.27 True False 2296.645634718849 2435.8204390924357 2168.120403166113 2291.2947588264046 2271.1145835885272 1689.587586540363 1853.1782851208116 2153.7867451004627 2505.4838332984964 2253.700636859442 1855.982206140836 1.2374286925381086 1.312415836225749 1.1681795202521417 1.2345456498695204 1.2236726063828383 0.9103468669850778 0.9984892522079429 1.1604565700976492 1.3499503524380096 1.2142900020284064 1.0 10.857967163642964 -11.165602877498669 1.574161484968841 1.000359569190158 1.1968027579844813 0.0 0.13691690067556642 0.5046693542930535 2.251203280993978 0.10141043055859947 0.02166604218100317 6.829629156954577e-12 11.165602877498669 0.19644318879432343 LSEGSQPAEEEEDQET(ph)PSR ddPTM_A549_MK2206_60min_R1 2 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LSEGSQPAEEEEDQET(0.997)PS(0.003)R;LSEGSQPAEEEEDQET(0.981)PS(0.019)R 218.69 1.0062999999999998e-66 22931000.0 1455.98 1545.8 1164.97 1241.58 2243.9 1676.5 1528.71 1984.3600000000001 2827.2 2303.7 2064.77 True False 1701.7138287066443 1624.4746173543672 1330.1802635226045 1545.7671557366446 1913.825282476356 1853.906117229366 1806.4568190572472 2265.649106847629 2186.843714110681 1783.292570010865 1552.0306242470117 1.0964434606644784 1.0466769095761255 0.8570580004940038 0.9959643396125601 1.2331105150743233 1.1945035673048094 1.1639311691634138 1.459796650563412 1.4090209818969632 1.1490060454677258 1.0 10.59994130933494 -6.7584140905571095 23.977137410528268 1.2179737556127275 0.9922972809253138 0.42355245508658945 0.12900095809881482 49.23582757941095 390208.7580068236 0.025011976792856935 0.050322319802335334 1.744158341937231e-07 6.7584140905571095 -0.2256764746874137 LSEGSQPAEEEEDQET(ph)PSR ddPTM_A549_PD325901_60min_R1 2 LSEGSQPAEEEEDQETPSR 19 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LSEGSQPAEEEEDQET(0.997)PS(0.003)R;LSEGSQPAEEEEDQET(0.997)PS(0.003)R 223.36 1.2257999999999999e-74 25816000.0 1508.0 1377.6 1366.44 1784.17 2044.88 1571.4 1866.31 1723.63 1330.62 1450.1599999999999 1642.81 True False 1661.0910498690735 1493.6951866876207 1459.174835471231 1894.3741287559342 1901.2546832530288 1558.6030393960089 1937.3334483340195 1689.2508474884232 1274.698668755695 1358.5966501141454 1440.7547846306118 1.1529311355332077 1.0367449080313706 1.0127850006379413 1.3148484037425034 1.3196240633970773 1.081796191845104 1.3446656356797893 1.1724763058284913 0.8847436651633324 0.9429756295846482 1.0 10.492609095468685 -8.750639526496816 24.310490402974207 0.9455734007686243 1.1806026896660002 0.48424547873215296 0.1088731927198837 97.36881459387831 219176.91374007348 0.019586926395351183 0.02209432238918295 1.7756627065857048e-09 8.750639526496816 0.23502928889737595 LSEPGTDLVEPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LSEPGTDLVEPSPK 14 0 Q8NEN9 Q8NEN9 PDZD8 PDZ domain-containing protein 8 1 LSEPGTDLVEPS(1)PK;LSEPGT(0.001)DLVEPS(0.999)PK 112.72 6.500900000000001e-06 6529000.0 5703.7 6298.7 5114.7 6377.0 8024.799999999999 6043.2 5665.8 6681.5 6678.6 6791.5 7167.9 True False 6282.735425157981 6829.513554289573 5461.81429918965 6770.892806782201 7461.165732057088 5993.986182816577 5881.415119444727 6548.232240964648 6397.921667457113 6362.683530955357 6286.293741061822 0.9994339564693583 1.0864133678131298 0.8688449067394505 1.0770881994512913 1.1868942240673623 0.9535008114024478 0.9355934294046038 1.0416681928481728 1.0177573513095866 1.0121518008925607 1.0 12.617993971509543 LSEPSLPIEDS(ph)QDLYNASPEPK ddPTM_A549_MK2206_60min_R1 2 LSEPSLPIEDSQDLYNASPEPK 22 0 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 LSEPSLPIEDS(0.493)QDLY(0.444)NAS(0.063)PEPK;LS(0.004)EPS(0.004)LPIEDS(0.508)QDLY(0.46)NAS(0.024)PEPK 64.723 0.00033199 2915200.0 1098.26 1233.8600000000001 1199.55 1024.94 1590.73 962.6999999999999 1370.37 1083.23 1865.0 1538.6100000000001 1876.15 True False 1283.619438120963 1296.6582037578337 1369.6642274981675 1276.050346011305 1356.7357242272888 1064.572275011459 1619.348490643405 1236.781169752745 1442.5804777930184 1191.0369323889458 1410.2501758941823 0.9102068980825136 0.9194526091341739 0.9712207457302525 0.9048396999505519 0.9620532210655728 0.7548818594094179 1.1482703695581118 0.8769941609605205 1.0229252245108473 0.8445571947074977 1.0 10.46173540154576 -7.766943052734032 24.999999165933378 1.008305480138858 0.9102514307385171 0.10051652220999308 0.09272807450408728 126.93358082129326 576585.7481579917 0.011018313241486168 0.015459557010296426 1.7102395571331005e-08 7.766943052734032 -0.0980540494003409 LSEPSLPIEDS(ph)QDLYNASPEPK ddPTM_A549_PD325901_60min_R1 1 LSEPSLPIEDSQDLYNASPEPK 22 0 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 LSEPS(0.001)LPIEDS(0.798)QDLY(0.13)NAS(0.071)PEPK 56.528999999999996 0.00037857 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LSEPSLPIEDSQDLY(ph)NASPEPK ddPTM_A549_PD325901_60min_R1 2 LSEPSLPIEDSQDLYNASPEPK 22 0 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 LSEPS(0.001)LPIEDS(0.475)QDLY(0.515)NAS(0.009)PEPK;LSEPS(0.001)LPIEDS(0.472)QDLY(0.52)NAS(0.007)PEPK 65.097 8.9349e-05 1416800.0 513.74 695.26 469.95 590.63 513.92 546.91 603.09 603.5 771.28 395.89 744.79 True False 565.894506604601 753.8520002151823 501.8436330389225 627.1118736819461 477.8240321277518 542.4561462874327 626.0409199735105 591.462719063409 738.8657837984489 370.89343783698996 653.1855516128056 0.8663610289715213 1.15411615941874 0.7683017969393247 0.9600822800405184 0.7315287837398394 0.8304778710246014 0.9584426943120967 0.9055049022486882 1.1311728833776051 0.5678224769687613 1.0 9.351349068783499 -8.740933485668844 21.57447368748864 1.0619426966070686 0.8975796241148996 0.0 0.18489114695989167 43.548156808555866 45816.87048972754 0.0187695786671231 0.021260175302605464 1.8157937392001748e-09 8.740933485668844 -0.16436307249216908 LSES(ph)QLSFR ddPTM_A549_MK2206_60min_R1 1 LSESQLSFR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 LS(0.036)ES(0.773)QLS(0.191)FR 59.198 0.0097996 2989500.0 936.54 930.6 929.75 965.82 1313.8 1171.9 1008.7 935.44 1409.9 1277.0 1676.4 True False 1094.6050557953545 977.9635650860228 1061.6025305459732 1202.4459433573072 1120.5417603803367 1295.9096801557378 1191.9677331757127 1068.0414846648519 1090.5599011476545 988.524813084982 1260.1036137137248 0.8686627384309931 0.77609773866437 0.8424724117862519 0.9542437068436846 0.8892457320060552 1.0284151763810014 0.9459283508145772 0.8475822726332516 0.865452562217167 0.784478992304167 1.0 10.299326650804002 LSES(ph)QLSFR ddPTM_A549_PD325901_60min_R1 2 LSESQLSFR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 LS(0.047)ES(0.94)QLS(0.013)FR;LS(0.002)ES(0.996)QLS(0.003)FR 92.866 0.00099279 6315600.0 3249.4 3193.0 3162.6 3189.3 3261.6 3234.3999999999996 3566.8999999999996 3488.6000000000004 4113.6 3778.5 4519.1 True False 3579.2766959181495 3462.0853158344744 3377.2330542587424 3386.2958175741674 3032.516467909158 3208.0601187619022 3702.6403313825726 3419.0171362462434 3940.71969742934 3539.924865157157 3963.2793489351784 0.9031098695780302 0.8735405736072173 0.8521309645170759 0.8544176474676128 0.7651533492646462 0.8094458745694566 0.934236526218463 0.8626737696813718 0.9943078320956863 0.8931807610554212 1.0 11.952478942889003 -8.620394931888322 1.4880061890721992 1.0000251718464876 0.8474158007548955 0.37089973524198183 0.053850246623424296 0.1495319040919921 0.6451829302902425 0.008377253018524164 0.009469306338033823 2.3966524976010604e-09 8.620394931888322 -0.15260937109159212 LSESQLS(ph)FR ddPTM_A549_PD325901_60min_R1 2 LSESQLSFR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 LSES(0.011)QLS(0.989)FR;LS(0.001)ES(0.034)QLS(0.965)FR 69.979 0.0037641 4785700.0 1141.24 1430.56 1515.8200000000002 1467.83 1667.1100000000001 1284.73 1313.1599999999999 1459.22 1671.9699999999998 1682.37 1742.94 True False 1257.0978446635163 1551.1183117507571 1618.6926605661447 1558.494525416201 1550.017944817279 1274.2675848308738 1363.1330223887235 1430.1147123640544 1601.7029153322947 1576.1448710849397 1528.5694294069788 0.8224015347155136 1.014751624564758 1.05895920029889 1.019577191217825 1.014031757405106 0.8336340897025767 0.8917704332982521 0.9355902877888114 1.047844399160651 1.0311241614300883 1.0 10.57796636726727 -8.757728826260003 24.979360381845822 1.022593189345797 0.9534957524786098 0.1772325899676852 0.07373797449397196 139.12323546021923 936573.9392722432 0.01323983571059922 0.014732751785545083 1.7469125857380901e-09 8.757728826260003 -0.06909743686718706 LSETEDSVIIIDSS(ph)PTALKHPEK ddPTM_A549_MK2206_60min_R1 2 LSETEDSVIIIDSSPTALKHPEK 23 1 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 LSETEDSVIIIDS(0.119)S(0.762)PT(0.119)ALKHPEK;LSETEDSVIIIDS(0.107)S(0.787)PT(0.107)ALKHPEK 144.4 1.7597999999999997e-27 7491400.0 1461.26 1671.25 1926.86 1404.96 2187.01 2124.2 2048.87 1647.56 2890.8999999999996 2179.3 2727.6 True False 1707.8849636230377 1756.3094865140938 2200.1177219766755 1749.1752630710512 1865.3037261146296 2348.98143407016 2421.12315799715 1881.1066754408873 2236.115765818679 1686.9946164104158 2050.261642069647 0.8330082993207659 0.8566270033424506 1.0730911981339881 0.8531473384564406 0.9097881401281492 1.1456983761833288 1.1808849701509974 0.9174959121519702 1.0906489786159295 0.8228191864856187 1.0 11.001592314212386 -7.229454892140624 21.97741953974245 1.0512979116320478 0.9088804919388077 0.2070664010914427 0.11222903802082326 127.75774546253105 87785.19976451858 0.013134885699907688 0.022747300676185554 5.89583210759644e-08 7.229454892140624 -0.14241741969324007 LSETEDSVIIIDSS(ph)PTALKHPEK ddPTM_A549_PD325901_60min_R1 1 LSETEDSVIIIDSSPTALKHPEK 23 1 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 LSETEDSVIIIDS(0.135)S(0.73)PT(0.135)ALKHPEK 128.17 2.8772e-22 2792100.0 831.16 1021.3 1133.7 881.13 1122.0 1161.3 1196.3 1519.0 1076.9 1437.8 1161.3 True False 915.5387513323473 1107.368535252662 1210.6396994919166 935.5553989085778 1043.1945906898688 1151.8427578277885 1241.8258511404779 1488.7023533675533 1031.6416380206276 1347.017062623517 1018.4674620872355 0.8989376542830859 1.087289065654816 1.1886876552843872 0.9185913480154401 1.0242787614951958 1.130956854986035 1.2193083209506705 1.461708310559695 1.0129352938840022 1.3225921423772888 1.0 9.99218417460238 -8.953296567769227 24.999934910914124 1.0057051022958192 1.119782043461822 0.0 0.17361620886954637 205.10613444444868 109791.8098164204 0.02588106423686091 0.027544334182233936 1.113533872217492e-09 8.953296567769227 0.11407694116600275 LSFASETPLEKEPHS(ph)PADQPEQQAESTLTSAETR ddPTM_A549_MK2206_60min_R1 2 LSFASETPLEKEPHSPADQPEQQAESTLTSAETR 34 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 LSFASET(0.001)PLEKEPHS(0.999)PADQPEQQAESTLTSAETR;LSFAS(0.001)ET(0.006)PLEKEPHS(0.993)PADQPEQQAESTLTSAETR 170.05 5.817499999999999e-63 26802000.0 2513.6 3052.6 2697.7 2507.3999999999996 3971.8 2697.2 2381.4 3134.1 4503.6 3749.0 3730.3999999999996 True False 2937.8342283802126 3207.964301291202 3080.2744250108863 3121.7131125614615 3387.553481411646 2982.6159137435416 2814.0695546591082 3578.368272778708 3483.541790771385 2902.0982962064213 2804.038726197615 1.0477152832921213 1.1440513539701807 1.0985135106132637 1.113291725751101 1.208097965895535 1.063685706576558 1.0035772788613 1.27614795022147 1.2423301284056096 1.0349708329962257 1.0 11.453290559013277 LSFASETPLEKEPHS(ph)PADQPEQQAESTLTSAETR ddPTM_A549_PD325901_60min_R1 3 LSFASETPLEKEPHSPADQPEQQAESTLTSAETR 34 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 LS(0.002)FAS(0.011)ET(0.052)PLEKEPHS(0.935)PADQPEQQAESTLTSAETR;LSFAS(0.001)ET(0.007)PLEKEPHS(0.992)PADQPEQQAESTLTSAETR;LSFAS(0.001)ET(0.005)PLEKEPHS(0.994)PADQPEQQAESTLTSAETR 157.4 3.7169000000000004e-51 42775000.0 2959.6099999999997 3014.97 3114.0200000000004 3205.5200000000004 3433.5299999999997 3416.3399999999997 3496.05 3402.34 2950.0699999999997 3425.7 3644.1500000000005 True False 3260.0674284502716 3269.0521029381366 3325.35612332347 3403.517690135874 3192.370697835457 3388.5184597239177 3629.094095861967 3334.4776596159063 2826.088817044769 3209.4007173663786 3195.942652170151 1.0200644327070691 1.0228757079600104 1.04049305173403 1.0649495502758075 0.9988823471747003 1.0602563401514733 1.1355316696304585 1.0433471505978635 0.8842739450051648 1.0042109845704175 1.0 11.642025805514953 -8.68470870151641 9.177725674327675 0.9453996882624576 1.0496413759238061 0.40392015777785084 0.04490098539104803 0.20423955107004713 22.540681727306392 0.008855216502428832 0.01003717700207398 2.066765952660823e-09 8.68470870151641 0.10424168766134856 LSGDQPAART(ph)PR ddPTM_A549_MK2206_60min_R1 2 LSGDQPAARTPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LSGDQPAART(1)PR;LSGDQPAART(1)PR 92.575 0.00010563 20861600.0 2393.8 2244.6000000000004 2041.35 2109.8999999999996 1801.79 1750.4099999999999 1708.81 1311.72 2286.99 2992.8 3227.5 True False 2797.814917209003 2358.8405525382427 2330.8441255499024 2626.8255947170096 1536.7490778167812 1935.6372243718793 2019.278657805086 1497.6603269740237 1768.990416572575 2316.724401410128 2426.022675531525 1.1532517587025526 0.97230771019955 0.9607676585459906 1.0827704214023846 0.6334438228117922 0.7978644403840103 0.8323412135307746 0.6173315451991382 0.7291730759214777 0.9549475463590008 1.0 11.244377319755298 -6.731470320538627 24.997258366248957 0.8272229336002059 1.0314549379136322 0.4738206823297554 0.12219027499381824 198.59340374341969 165646.27076190137 0.020600793219457646 0.0428795484418105 1.8557936290816148e-07 6.731470320538627 0.20423200431342625 LSGDQPAART(ph)PR ddPTM_A549_PD325901_60min_R1 2 LSGDQPAARTPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LSGDQPAART(1)PR;LSGDQPAART(1)PR 106.6 5.7026000000000006e-05 51882000.0 5510.8 4559.1 4628.3 5395.0 5445.9 5559.6 5293.5 5187.5 5477.299999999999 5224.3 5577.1 True False 6070.252359163458 4943.311357162843 4942.404270228844 5728.236897066016 5063.398771335073 5514.324460879508 5494.947039214343 5084.031242984978 5247.108128823833 4894.436806415382 4891.152056149764 1.2410680120915856 1.0106640113442187 1.010478556685769 1.1711426738131696 1.0352159804495835 1.1274081029532121 1.1234463733969204 1.039434305991919 1.07277550740352 1.0006715698526463 1.0 12.25595860054271 -10.702374594681109 0.3239737367343232 0.9627456437181626 1.099947465413559 0.2380431214683757 0.0666942038449479 3.851863021528383 0.5164328399816607 0.19268645440636423 0.028049218339069152 1.984382577319985e-11 10.702374594681109 0.1372018216953964 LSGEMPPAS(ph)PSFPR ddPTM_A549_MK2206_60min_R1 2 LSGEMPPASPSFPR 14 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 LSGEMPPAS(0.98)PS(0.02)FPR;LSGEMPPAS(0.954)PS(0.046)FPR 99.941 1.1727e-05 8545000.0 5512.6 6466.9 5713.3 5199.5 7719.3 5889.4 5014.0 5064.6 8182.3 7792.9 8511.7 True False 6442.99210986981 6796.0375876367925 6523.531850248243 6473.377733414427 6583.801195694874 6512.61239893268 5924.978897732751 5782.522559687005 6329.022114448157 6032.478477595895 6398.009979030736 1.0070306440575274 1.0622111578304159 1.019618892691462 1.0117798744657647 1.0290389069840564 1.0179121977423526 0.9260659044221049 0.9038001782802824 0.9892172933758021 0.9428679382131541 1.0 12.64340752730119 -7.548101897568495 24.970442476054124 0.9813758171732575 1.0264799928901742 0.4385662397315836 0.03423592134311365 232.11791980164998 229791.5578764972 0.005595694156398037 0.008299971269399145 2.8307277503898023e-08 7.548101897568495 0.04510417571691672 LSGEMPPAS(ph)PSFPR ddPTM_A549_PD325901_60min_R1 1 LSGEMPPASPSFPR 14 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 LS(0.004)GEMPPAS(0.953)PS(0.042)FPR 60.55 0.0069583 3509500.0 3143.1 2930.4 3238.5 2753.4 4455.3 3640.5 3636.1 3332.5 3532.1 3148.7 3890.2 True False 3462.1851981720747 3177.355092239696 3458.284084682518 2923.471264574895 4142.375097950597 3610.852975003927 3774.473775250265 3266.0306732043264 3383.6581202086177 2949.8905446394974 3411.7300620096125 1.014788724560683 0.9313031906070955 1.0136452831340015 0.8568882096295982 1.2141567540987144 1.0583642050734299 1.1063225128153853 0.9572945730883924 0.9917719335085791 0.8646318703484772 1.0 11.736287788995325 -4.875398990863269 18.872000671466413 1.0063421684098381 2.9128319898208015 0.0 0.09846546376477973 6882.06795596982 1072273.4897419584 0.011217385459463642 16291.292576002452 1.3322968747292607e-05 4.875398990863269 1.9064898214109633 LSGEMPPASPS(ph)FPR ddPTM_A549_PD325901_60min_R1 1 LSGEMPPASPSFPR 14 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 LS(0.001)GEMPPAS(0.388)PS(0.611)FPR 57.794 0.011384 3232400.0 3048.0 2903.8 2621.3 2961.3 3674.9 3208.9 3448.1 3386.0 3125.8 3346.3 4186.1 True False 3357.4307161809925 3148.513416886985 2799.197181157414 3144.2127753997397 3416.7877017167552 3182.7677823074055 3579.3193323727196 3318.463573734387 2994.433496262305 3135.01404691687 3671.2362378742587 0.9145232010798172 0.8576166753872685 0.7624671908278564 0.8564452330695888 0.9306913203970671 0.8669471469780192 0.9749629553790956 0.9039090264743801 0.8156471831941167 0.8539396115604168 1.0 11.842050237084798 -10.970230292347624 1.1953874380195801 1.00111556292742 0.8706774863958409 0.0 0.06894935312538707 0.3975929538570142 0.9960064721539792 0.04315901615737258 0.009618823878419384 1.0709512637518789e-11 10.970230292347624 -0.13043807653157913 LSGFS(ph)FK ddPTM_A549_MK2206_60min_R1 2 LSGFSFK 7 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LSGFS(1)FK;LSGFS(1)FK 87.30799999999999 0.012927000000000001 235210000.0 7667.0 8683.3 8540.6 6296.8 10630.7 8282.3 6905.4 8623.0 10542.2 8961.0 10550.8 True False 8961.002159846874 9125.242880626976 9751.785504039726 7839.516282674092 9066.938112403139 9158.727488654205 8160.021795054596 9845.336656829966 8154.408532434076 6936.703876315216 7930.745172733698 1.129906706705853 1.1506160747668481 1.2296178091267964 0.9884968072895273 1.1432643358124441 1.1548382010989802 1.0289098460897674 1.241413819558688 1.028202061071051 0.8746597860897048 1.0 12.953240712571134 -8.964819464180572 23.049515407408425 1.0124419365037425 1.1302048136504186 0.4258591538365555 0.081422021988708 53.259553510553744 34894.81692303444 0.011328935112830526 0.012004658822058908 1.0843775951166377e-09 8.964819464180572 0.1177628771466761 LSGFS(ph)FK ddPTM_A549_PD325901_60min_R1 2 LSGFSFK 7 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LSGFS(1)FK;LSGFS(1)FK 93.649 0.012121999999999999 478420000.0 14369.8 14030.900000000001 14870.8 13822.6 18561.2 15468.099999999999 14289.0 15118.599999999999 16028.3 15038.2 18084.2 True False 15828.611517512343 15213.333184447843 15880.02191338485 14676.390608597721 17257.5253446638 15342.132922032206 14832.775714240826 14817.047662687737 15354.686290914684 14088.685485564725 15859.958045188989 0.9980235428374191 0.9592290938665318 1.0012650643929002 0.9253738608123055 1.0881192305485798 0.9673501580722111 0.9352342340363409 0.9342425509872259 0.9681416714448638 0.888317954273431 1.0 13.95310133419299 LSGFS(ph)FKK ddPTM_A549_MK2206_60min_R1 4 LSGFSFKK 8 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LSGFS(1)FKK;LSGFS(1)FKK;LSGFS(1)FKK;LS(0.001)GFS(0.999)FKK 102.06 0.0010747 3495369000.0 46652.2 54816.9 52122.8 43150.9 58419.9 42346.899999999994 40796.8 44038.8 56735.5 58949.6 57768.8 True False 54525.95082321746 57606.846068089384 59514.59680466967 53722.87243711749 49826.41009837356 46828.020850402805 48209.05047766723 50281.43476316868 43884.999837976306 45632.844417724744 43423.21262222947 1.2556867060385166 1.3266371276868387 1.3705710197545957 1.2371924874488756 1.1474602427934162 1.0784098647374223 1.1102138134521113 1.1579390774377738 1.0106345704949162 1.05088595850147 1.0 15.406178845776637 -7.124192509956527 0.512574828223556 1.000802829944023 1.356765891212065 0.7930292151703562 0.05423269967747864 0.3153274819937092 0.14539005623813936 0.013082972900614701 0.04894468959029146 7.512897955517835e-08 7.124192509956527 0.355963061268042 LSGFS(ph)FKK ddPTM_A549_PD325901_60min_R1 5 LSGFSFKK 8 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LS(0.02)GFS(0.98)FKK;LSGFS(1)FKK;LS(0.012)GFS(0.988)FKK;LS(0.005)GFS(0.995)FKK;LS(0.024)GFS(0.976)FKK 111.27 0.0010874 6386614000.0 53694.100000000006 59460.1 60586.5 62421.8 78403.6 63778.2 61005.8 65521.8 68148.2 74900.3 79809.2 True False 59145.08550449276 64471.011302239116 64698.26422622124 66277.45281580648 72896.8016137363 63258.81148479478 63327.40910265465 64214.916298142256 65284.16814574917 70171.08227543482 69993.17435220235 0.8450121894297504 0.9211042633646537 0.9243510502990282 0.9469130873005055 1.0414844345667627 0.9037854343693491 0.9047654959038451 0.9174454065337262 0.932721922529793 1.0025417896084732 1.0 16.094926618630446 -14.999999999976632 0.2037255461812916 1.346414239023264 0.9172871436649833 0.3045998528377869 0.04398097888449707 48.57953062548737 0.5768837235138816 6.695640856796662 0.03740860436563242 1.0000000000538067e-15 14.999999999976632 -0.42912709535828075 LSGINEIPRPFS(ph)PPVT(ph)SNTSPPPAAPLAR ddPTM_A549_MK2206_60min_R1 1 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 LS(0.003)GINEIPRPFS(0.988)PPVT(0.288)S(0.269)NT(0.234)S(0.218)PPPAAPLAR 52.777 0.0037865000000000004 6946700.0 520.98 531.56 298.87 567.06 710.01 757.1 499.26 417.68 739.44 858.16 855.42 True False 608.9086872619043 558.6141335236687 341.25426007450915 705.9897254562906 605.5684695445593 837.2158194776939 589.9690794738838 476.88741909135314 571.9580206430401 664.3010599819954 642.9956056090402 0.9469873230084535 0.8687681978705809 0.5307256489743439 1.0979697517335019 0.941792547665967 1.3020552740553955 0.91753205516089 0.7416651294835044 0.8895208857629533 1.0331346811503865 1.0 9.328665067627 -6.293462203846182 24.982596061844962 0.9628118708501915 0.790820867797558 0.23068049734018958 0.16364175913553833 803.6042017682782 626930.1246993887 0.022793374429298945 0.052970894619880804 5.087890970532343e-07 6.293462203846182 -0.17199100305263348 LSGINEIPRPFS(ph)PPVTSNTSPPPAAPLAR ddPTM_A549_PD325901_60min_R1 3 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 LSGINEIPRPFS(0.98)PPVT(0.009)S(0.009)NT(0.002)S(0.001)PPPAAPLAR;LSGINEIPRPFS(0.623)PPVT(0.289)S(0.064)NT(0.019)S(0.005)PPPAAPLAR;LSGINEIPRPFS(0.985)PPVT(0.011)S(0.003)NT(0.001)SPPPAAPLAR 119.35 4.077199999999999e-21 231493100.0 6315.4 6669.5 6545.0 6433.1 8095.6 8042.6 7066.3 8085.7 9416.099999999999 8146.2 7522.7 True False 6956.534758848246 7231.562171612283 6989.183058282256 6830.457976369857 7526.992984303837 7977.103732115533 7335.211913327733 7924.4243703910615 9020.374062369789 7631.847541760812 6597.455590324328 1.0544269171058211 1.0961138082108381 1.059375536916448 1.0353170071182054 1.1408933158023447 1.2091182157883054 1.1118243712144695 1.2011334160419107 1.3672504405484525 1.1567864970479678 1.0 12.687694018984454 -6.920595834160096 4.764612399617535 1.1768520917295118 1.0642574242089868 0.28756483421945134 0.08304664376913486 0.3353016910636037 13.967745741647462 0.0190448236183633 0.03660198956092229 1.20061610825689e-07 6.920595834160096 -0.11259466752052494 LSGINEIPRPFSPPVT(ph)S(ph)NTSPPPAAPLAR ddPTM_A549_PD325901_60min_R1 1 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 LSGINEIPRPFS(0.171)PPVT(0.469)S(0.459)NT(0.454)S(0.447)PPPAAPLAR 51.22 0.004490600000000001 18111000.0 1419.3 1046.5 1262.3 1452.9 1237.1 1409.9 1545.1 1493.6 1222.6 1157.2 1350.6 True False 1563.386291166564 1134.6922276920689 1347.9672688265387 1542.6423332246927 1150.210363763313 1398.418241850855 1603.899626011162 1463.8089762934678 1171.2183737060263 1084.134194511012 1184.4847621588049 1.319887212662141 0.9579627057624737 1.1380199322866558 1.3023741482441034 0.9710638756272183 1.1806131125757513 1.3540905524930051 1.2358191705443093 0.9887998656659799 0.9152791400499767 1.0 10.210043923764225 -8.772190588024545 24.695390757118282 0.9947110245981637 1.1761205476888648 0.3663062726889341 0.12407159080343151 154.9722359707833 355968.0556660605 0.020581719077283022 0.02202029555460856 1.6896992526018478e-09 8.772190588024545 0.18140952309070102 LSGINEIPRPFSPPVT(ph)SNTSPPPAAPLAR ddPTM_A549_MK2206_60min_R1 1 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 LSGINEIPRPFS(0.288)PPVT(0.463)S(0.111)NT(0.111)S(0.027)PPPAAPLAR 85.619 4.2963e-07 62923000.0 1691.0 1796.7 2024.9 2017.0 2845.9 2055.5 2030.8 2082.7 2947.0 3147.8 2596.0 True False 1976.3994590193115 1888.1443556738209 2312.061268193107 2511.165090546572 2427.271879940934 2273.011645669529 2399.7700728990176 2377.929103001249 2279.5092053919707 2436.7097937579533 1951.3415540448773 1.0128413731171215 0.9676134614977799 1.184857291334008 1.2868916184054264 1.243899037003294 1.1648456114501695 1.2298052424111023 1.2186124454081917 1.1681754025413156 1.2487356653205948 1.0 10.930250607559884 -10.503303583482108 0.8765530786230689 1.00253747542382 1.1674950303118903 0.0 0.11611505865299383 0.6093265930116264 0.8589081887229967 0.06143708497703515 0.018672118360735544 3.1383141612402937e-11 10.503303583482108 0.16495755488807018 LSGINEIPRPFSPPVTSNT(ph)SPPPAAPLAR ddPTM_A549_MK2206_60min_R1 1 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 LSGINEIPRPFS(0.068)PPVT(0.092)S(0.024)NT(0.689)S(0.126)PPPAAPLAR 122.81 3.2123000000000006e-21 67187000.0 2775.5 2535.4 2822.2 2584.7 3677.5 3098.5 3190.0 2713.0 3996.3 4262.7 4443.1 True False 3243.936545539976 2664.4410304310154 3222.430397103354 3217.9516160315925 3136.544621554793 3426.381213382159 3769.581707971174 3097.576058214043 3091.1444307797524 3299.7531094262754 3339.7556466782708 0.9713095473815287 0.7977952018978021 0.9648701096765542 0.9635290591490354 0.9391539242322737 1.0259376960078042 1.1286998531525532 0.9274858360655516 0.9255600582198917 0.9880223161560392 1.0 11.705526836396892 -5.963825404409832 24.689547949944597 0.9752444321634256 0.8837472295339363 0.24629104963881876 0.06615312230264618 165.23082887955937 112769.9195257876 0.009180094486806598 0.02854195744299208 1.0868624775598753e-06 5.963825404409832 -0.09149720262948935 LSGLAAPDYTRLS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 LSGLAAPDYTRLSPAK 16 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 LSGLAAPDYT(0.001)RLS(0.999)PAK 142.43 8.4027e-15 20788000.0 3865.8 4582.1 3614.4 3988.3 5819.8 4096.9 3899.9 4601.6 5923.9 5383.9 6547.6 True False 4518.252530264256 4815.3093182685025 4126.976269325481 4965.433679041592 4963.715129442441 4530.431238697875 4608.46134887674 5253.890891808971 4582.146108524426 4167.673250719058 4921.650215433067 0.918036092060371 0.9783932436256632 0.8385350621594994 1.008896094133474 1.008546912553328 0.9205106093260291 0.9363650700786811 1.0675059506126785 0.9310182373700511 0.8468040328526953 1.0 12.264926412918962 -6.088628729190861 0.006496394024898951 1.8889349034383165 2.4741055770171012e-05 0.0 0.06979062394240693 18411.082504171 23.0084333042354 3220.1415088784966 3472.8984141625288 8.15401058350014e-07 6.088628729190861 -1.8889101623825464 LSGLAAPDYTRLS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 LSGLAAPDYTRLSPAK 16 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 LSGLAAPDYT(0.005)RLS(0.995)PAK;LSGLAAPDYT(0.028)RLS(0.972)PAK 130.73 1.2456e-10 78881000.0 12347.7 11318.4 11309.2 11161.3 12884.7 12248.7 11434.4 12200.5 13241.8 11600.2 13229.9 True False 13601.229414103702 12272.241289928255 12076.710319744183 11850.70815184854 11979.72312180192 12148.950648243544 11869.54234914376 11957.151456392909 12685.29319559991 10867.761392297485 11602.706171245944 1.1722463030056332 1.0577050826592134 1.0408528959970498 1.0213744946172298 1.0324938807370911 1.04707905801763 1.022997753623986 1.0305485013509486 1.0933047005048577 0.9366574686886571 1.0 13.502173712876681 -14.857026827213536 0.006355985944444408 7.447704436190721e-05 2.0060999226602565 0.2654332634819042 0.04746345438402649 36418.49101934372 18.444755896519226 3188.291377870576 2655.948155101166 1.3898667737918872e-15 14.857026827213536 2.0060254456158946 LSGLS(ph)FK ddPTM_A549_MK2206_60min_R1 2 LSGLSFK 7 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 LSGLS(1)FK;LSGLS(1)FK 86.67 0.013046 118936000.0 3020.8 3544.7 3087.0 2402.0 4097.2 3076.6000000000004 2534.1 3536.5 3572.7 3641.7 3525.3 True False 3530.6371885307717 3725.110089362159 3524.783018871115 2990.490107829879 3494.5073075280216 3402.1637699182056 2994.5131680782924 4037.8097050770252 2763.4891544295524 2819.0374407295067 2649.870716669649 1.3323809219523237 1.4057705026620575 1.3301716935462624 1.1285418903712856 1.3187463394138375 1.283898021332164 1.1300601003817232 1.5237761146897515 1.042876973976564 1.063839614135012 1.0 11.371706259066443 -8.894725756738413 9.761158141615326 1.0188895947136631 1.298461334089507 0.5612559492822713 0.10647241753041567 0.14213959453395425 12.211376843815279 0.017436564667787275 0.018541764935827397 1.274307511987843e-09 8.894725756738413 0.2795717393758439 LSGLS(ph)FK ddPTM_A549_PD325901_60min_R1 2 LSGLSFK 7 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 LSGLS(1)FK;LSGLS(1)FK 87.30799999999999 0.012927000000000001 206270000.0 7624.3 8174.299999999999 7859.7 7660.200000000001 8168.700000000001 7912.4 7599.6 6953.6 7846.5 8913.099999999999 9755.599999999999 True False 8398.31332328699 8863.17694870835 8393.106506215592 8133.353156423558 7594.958692485143 7847.96403774786 7888.8069366606915 6814.90499300633 7516.738891938762 8350.325344880832 8555.723045843642 0.9816018211770983 1.0359354669637264 0.9809932440827372 0.9506330572931213 0.8877050661632581 0.9172765405911999 0.9220502924639504 0.7965317433126825 0.8785626710521425 0.9759929464918115 1.0 13.062674066971628 -6.255337368079582 2.5838436273738674 0.923508905388769 1.0079499881907203 0.3415796476828691 0.05220955206232877 0.328428758768656 4.295694924487081 0.009134611594494352 0.02691299679048113 5.554725881279294e-07 6.255337368079582 0.0844410828019514 LSGLS(ph)FKR ddPTM_A549_MK2206_60min_R1 4 LSGLSFKR 8 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 LSGLS(1)FKR;LSGLS(1)FKR;LSGLS(1)FKR;LSGLS(1)FKR 108.43 0.00073228 1290657000.0 21144.300000000003 31433.1 26930.600000000002 23818.800000000003 31740.0 22617.1 19517.6 24106.4 30852.0 29765.9 29878.199999999997 True False 24712.94091149735 33032.910528374676 30749.764032397274 29654.407069266566 27071.08804572375 25010.42650998409 23063.695280093474 27523.556022753768 23864.07126052021 23041.762516684637 22458.61834363007 1.1003767254679169 1.470834493153217 1.3691743437600568 1.3204021109195898 1.2053763785251692 1.1136226693605926 1.026941859343499 1.2255231199723498 1.062579669656694 1.0259652737373297 1.0 14.454981555279677 -7.141896450693401 1.4782833992050062 1.0463115414596182 1.3347518590682268 0.5492334688445115 0.10051911146356261 0.1927743169568075 0.8260784260988149 0.015412004134028105 0.03210308550415133 7.212794341238863e-08 7.141896450693401 0.28844031760860855 LSGLS(ph)FKR ddPTM_A549_PD325901_60min_R1 5 LSGLSFKR 8 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 LSGLS(1)FKR;LSGLS(1)FKR;LS(0.001)GLS(0.999)FKR;LSGLS(1)FKR;LSGLS(1)FKR 135.71 0.00066873 2418581300.0 63146.93 69568.7 69808.15 66289.6 83680.01999999999 71211.75 71082.05 72809.26999999999 71000.3 72742.5 84485.11 True False 69557.55984728709 75431.4985003739 74545.75084950747 70384.15803739526 77802.62407559708 70631.82511818048 73787.1163103401 71357.03199208269 68016.40430119412 68149.52613568725 74093.97706523802 0.9387748181750761 1.0180516890591285 1.0060973077996835 0.9499308962106818 1.0500532858034288 0.9532735036748101 0.9958584925920803 0.9630611666216065 0.917974807065725 0.91977146908558 1.0 16.177068653372483 -8.304631249204613 7.583665222603861 0.9602809893455879 0.9889756226306226 0.16923726732034616 0.037234792131864654 0.4981947148354377 77.99106899380442 0.006521409968507942 0.007915112018390544 4.958710463394005e-09 8.304631249204613 0.028694633285034632 LSGLSFKR ddPTM_A549_PD325901_60min_R1 2 LSGLSFKR 8 1 P49006 P49006 MARCKSL1 MARCKS-related protein 0 ; 59.35 0.012836000000000002 5442300.0 3248.7 3350.5 2761.3999999999996 2692.8500000000004 3628.3 3524.5 3377.7 3224.1000000000004 3086.9 3748.9 4085.9 False True 3578.5056324334623 3632.8583935807724 2948.8052096471542 2859.181228593924 3373.4607249554833 3495.7976405442523 3506.2402218483594 3159.792796242481 2957.168327983912 3512.193814208724 3583.360202654123 0.998645246375995 1.0138133450524978 0.822916213520213 0.7979050575145044 0.9414238408008295 0.9755641193857613 0.9784783062700081 0.8817960287391945 0.8252500895091699 0.9801397614471781 1.0 11.807097356528756 -5.7196355996537305 24.93787692467851 0.9103986295106574 1.0062296251396066 0.22266738973020306 0.06824261071707906 190.3700481721236 113561.84408374754 0.011050406741332983 0.04279735903729466 1.9070601901134191e-06 5.7196355996537305 0.09583099562894914 LSGPS(ph)LK ddPTM_A549_MK2206_60min_R1 2 LSGPSLK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LS(0.001)GPS(0.999)LK;LS(0.002)GPS(0.998)LK 92.838 0.012225 31964000.0 7512.8 19150.9 12552.099999999999 9075.6 18008.0 15109.8 6778.299999999999 13993.3 14150.5 16235.9 16113.6 True False 8780.776969674918 20125.599009892456 14332.176524513146 11299.122407419167 15359.047055053354 16708.709006926496 8009.829370263644 15976.89312768395 10945.434343705154 12568.198913677736 12112.148407264067 0.7249561906299619 1.661604393636925 1.1832893754767448 0.9328751619855234 1.2680695891937728 1.3795000230434524 0.6613054184061911 1.319080033572084 0.9036740614192611 1.0376523215435636 1.0 13.564167167092089 -7.740109669024806 24.999205266800978 0.9665083162986757 1.2043964330649428 0.12889257734424908 0.2654968237815117 318.41572712222313 373194.17721337796 0.03694425324720375 0.05476811421705969 1.819241401647582e-08 7.740109669024806 0.2378881167662671 LSGPS(ph)LK ddPTM_A549_PD325901_60min_R1 1 LSGPSLK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LSGPS(1)LK 104.2 0.010163 33640000.0 8264.8 10398.0 11769.0 10381.0 13777.0 9927.2 12892.0 12422.0 10507.0 12377.0 17430.0 True False 9103.836411775814 11274.275951784177 12567.715112746208 11022.21079303842 12809.351048069797 9846.356174552677 13382.612114773088 12174.233465129511 10065.427329076738 11595.51410772796 15286.220497873503 0.5955583600957651 0.7375450297444397 0.8221597427889077 0.7210553317984484 0.8379671776847476 0.6441328107181512 0.8754689961874337 0.7964188052123868 0.6584640938861872 0.7585599140965575 1.0 13.899944125489322 -10.906381793585018 1.0714610367483792 1.0051039348961164 0.7427572614127413 0.04571199773776846 0.1079427983737119 0.3095506399382445 0.6105451668009142 0.06290601230439645 0.013811481769743329 1.2405612355366214e-11 10.906381793585018 -0.26234667348337504 LSGPS(ph)LKMPSLEISAPK ddPTM_A549_MK2206_60min_R1 1 LSGPSLKMPSLEISAPK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LS(0.194)GPS(0.805)LKMPS(0.001)LEISAPK 85.73700000000001 1.4398e-05 1794600.0 782.38 1944.9 1459.5 1223.9 1614.1 1271.1 962.53 1136.4 1600.9 1706.4 2128.6 True False 914.4266166454925 2043.8871026604397 1666.4790463370239 1523.7555549429594 1376.668028185341 1405.6069583121077 1137.409241809873 1297.4881800790413 1238.2987061119793 1320.92305485373 1600.0098736286304 0.5715131085858131 1.2774215561714934 1.0415429765802942 0.9523413449238689 0.8604122079967064 0.8784989277124645 0.7108763893002519 0.8109251083160467 0.7739319153722886 0.8255718146651402 1.0 10.643865092644168 -6.631495179907963 3.9287368844377677 0.8675764770176849 0.9952480224452547 0.08435514174893366 0.16989595379547795 0.41773095900033175 12.030397072075603 0.024302631686401028 0.05262877675786962 2.3361720304823137e-07 6.631495179907963 0.12767154542756975 LSGPS(ph)LKMPSLEISAPK ddPTM_A549_PD325901_60min_R1 4 LSGPSLKMPSLEISAPK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LS(0.23)GPS(0.747)LKMPS(0.023)LEIS(0.001)APK;LS(0.162)GPS(0.817)LKMPS(0.019)LEIS(0.002)APK;LS(0.191)GPS(0.808)LKMPS(0.001)LEISAPK;LS(0.021)GPS(0.979)LKMPSLEISAPK 144.5 7.6232e-17 26961000.0 10007.099999999999 10744.0 13511.3 13794.9 14226.2 16324.900000000001 16312.7 15630.800000000001 14893.4 14454.400000000001 17735.4 True False 11023.013425162337 11649.434586071286 14428.258068047222 14646.979642508984 13227.000789725673 16191.955426903343 16933.48872515195 15319.031431874608 14267.48219119363 13541.746717196667 15554.05823396361 0.7086905076060889 0.7489643159901352 0.9276201651696206 0.9416821913734422 0.8503890490035193 1.0410116243198082 1.0886862110478819 0.9848896796865656 0.9172835781236417 0.8706246635766807 1.0 13.925003424867118 -5.614048030712635 1.0916125176894593 0.9718049058429898 0.6359904397667822 0.6348308836718957 0.06701603062568114 0.46182367577604877 0.6396911074314585 0.009717661832818442 0.1537168170655655 2.4319350348246257e-06 5.614048030712635 -0.3358144660762077 LSGSNPYTTVTPQIINSK ddPTM_A549_PD325901_60min_R1 2 LSGSNPYTTVTPQIINSK 18 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 240.2 4.9891e-74 4982500.0 5106.9 5007.2 5306.6 5393.9 6953.8 6128.3 6180.1 6345.4 6811.0 6346.8 6804.299999999999 False True 5625.34872849892 5429.174316769927 5666.737787178097 5727.068952564293 6465.389077307669 6078.393156631392 6415.2870873804795 6218.836019129994 6524.757355890516 5946.061964848338 5967.414236011515 0.9426777672901716 0.9098034931120627 0.9496136120366964 0.9597237138329008 1.083449015201765 1.0185974890012082 1.075053085583734 1.0421324501994895 1.0933977595380604 0.996421855376769 1.0 12.5428902116298 -6.632715210796772 5.008706593875043 1.0474820213192562 0.935065428683234 0.7172083221915346 0.03149299741855737 0.09462215056984356 3.7944677138728435 0.0052361205850939025 0.011092006697152391 2.329618407366548e-07 6.632715210796772 -0.11241659263602222 LSGSS(ph)EDEEDSGKGEPTAK ddPTM_A549_MK2206_60min_R1 1 LSGSSEDEEDSGKGEPTAK 19 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 LS(0.189)GS(0.16)S(0.651)EDEEDSGKGEPTAK 76.807 0.00011134 6103200.0 2087.7 2641.7 2477.1 2198.5 3187.7 1991.6 2516.2 2558.2 3845.8 4005.1 3920.8 True False 2440.05272063549 2776.1512463870063 2828.3900278735455 2737.132598694415 2718.7935527206564 2202.349790082914 2973.3609697796483 2920.8326841589255 2974.7324404806373 3100.3451283372465 2947.1571514249445 0.8279343771864115 0.9419759801559081 0.9597011229978099 0.9287365613913791 0.9225139390365137 0.7472793871945655 1.0088912185568504 0.991067844056673 1.0093565723301725 1.0519782180051838 1.0 11.52510827608314 LSIS(ph)DD ddPTM_A549_MK2206_60min_R1 1 LSISDD 6 0 P47974;Q07352 P47974;Q07352 ZFP36L2;ZFP36L1 Zinc finger protein 36, C3H1 type-like 2;Zinc finger protein 36, C3H1 type-like 1 1 LS(0.242)IS(0.758)DD 50.966 0.036198 15970000.0 939.53 937.0 864.25 654.45 905.78 886.67 865.66 1040.5 1085.5 1035.3 1168.0 True False 1098.0996946968733 984.6892977494125 986.8136456298548 814.7902793793768 772.5409618795103 980.4968308760888 1022.9392167154631 1187.9940613976084 839.6359831873035 801.4250109529229 877.953364839914 1.2507494574009643 1.121573579171783 1.1239932383080398 0.9280564458317734 0.879933938199981 1.1167983063142226 1.165140721229522 1.353140279397673 0.956356017087995 0.9128332358508071 1.0 9.778000498440763 -5.603409441570286 1.6902184862096872 1.0201577928048142 1.2510020776961526 0.15802678483021715 0.13219503518165868 0.6668272727414309 2.8889147177460717 0.019778339965789902 0.2008964482576363 2.49224399603185e-06 5.603409441570286 0.23084428489133835 LSIVPVR ddPTM_A549_PD325901_60min_R1 2 LSIVPVR 7 0 H0YEN5;P15880;I3L404;E9PM36;E9PMM9;E9PPT0 H0YEN5 RPS2 40S ribosomal protein S2 0 ; 88.029 0.035552999999999994 7726100.0 2402.3 2406.8 2533.7 2665.7 3402.2 2555.3 2542.8 2581.4 3668.2 3183.5 2827.8 False True 2646.179727520212 2609.6294826653357 2705.6521183758227 2830.354234756047 3163.241208952827 2534.4904840070144 2639.5676454735517 2529.911951930877 3514.038310509115 2982.4932667004923 2479.99852690113 1.0670085884392573 1.052270577727393 1.0909894054480174 1.1412725467594138 1.275501245117851 1.0219725764006702 1.06434242473999 1.0201263930152877 1.4169517733141819 1.2026189670472314 1.0 11.27612354832542 LSKDDIDR ddPTM_A549_PD325901_60min_R1 1 LSKDDIDR 8 1 P54652 P54652 HSPA2 Heat shock-related 70 kDa protein 2 0 47.198 0.038464 1261800.0 1525.3 1370.7 1329.9 1641.6 1753.9 1709.3 1631.5 1850.8 1450.8 1526.4 2200.8 False True 1680.1473331334882 1486.2136994720688 1420.1550113383612 1742.9979036558977 1630.7121146265247 1695.3800275166088 1693.5876252910568 1813.884342075487 1389.827921292903 1430.0228435029462 1930.115552020655 0.8704905420685964 0.7700128098113808 0.7357875593777732 0.9030536549125973 0.8448779726785361 0.8783826573189882 0.8774540071023338 0.9397801806096611 0.7200749819552927 0.7409001196875714 1.0 10.914471505905123 -11.075694800083784 1.3955059011852435 0.9999713020401946 0.825292487222536 0.0 0.10096775753780125 0.3281639775810803 1.141246566835933 0.05331032114084904 0.01175531375026319 8.400501233333267e-12 11.075694800083784 -0.17467881481765857 LSKEDIER ddPTM_A549_MK2206_60min_R1 2 LSKEDIER 8 1 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 70.977 0.006411 46244000.0 9381.9 10224.9 10017.6 8861.5 12959.099999999999 9416.4 9567.9 9042.6 13864.8 13203.900000000001 13695.2 False True 10965.335354567276 10745.303735920996 11438.246313522275 11032.567897807845 11052.833556815964 10412.837197899553 11306.263581096364 10324.41624180107 10724.444937536002 10221.129819493188 10294.303871708547 1.065184736260108 1.0438106228291857 1.1111238269308896 1.0717157794543293 1.0736844078589962 1.0115144576717583 1.0983028791455194 1.0029251487490358 1.0417843762131012 0.992891792089365 1.0 13.329558653930507 -9.270825329631304 0.2574034834342287 0.9877269247689939 1.081000887330631 0.46855894454161917 0.028465690064014348 1.422691756196768 0.28065046676852706 0.04867943815458993 0.028705646172013276 5.360121947267647e-10 9.270825329631304 0.093273962561637 LSKEEIER ddPTM_A549_MK2206_60min_R1 1 LSKEEIER 8 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 0 59.426 0.012681999999999999 10329000.0 3073.8 3212.6 2867.9 2547.0 4053.4 2486.8 2678.5 2666.5 3755.6 4157.6 3978.7 False True 3592.582292805178 3376.10761787595 3274.6113442891037 3171.0151143391745 3457.150229506511 2749.9515253957584 3165.1487789344196 3044.484540813767 2904.9625964608363 3218.3952724213977 2990.678983466237 1.2012597516037402 1.128876631875413 1.0949390965705672 1.0602993941743375 1.1559750306265328 0.9195074230964528 1.058337854524918 1.0179910841802116 0.9713388205557073 1.0761420032755353 1.0 11.546257345966454 -5.620965033358178 0.41385250879866015 0.984746196974321 1.291476211031192 0.48097152325951864 0.05676964741982211 1.7675146000963808 0.24432082981144762 0.01145255262304225 0.25216199063291805 2.3935084587936055e-06 5.620965033358178 0.30673001405687095 LSKEEIER ddPTM_A549_PD325901_60min_R1 2 LSKEEIER 8 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 0 ; 77.37899999999999 0.004525899999999999 41099000.0 7152.4 6838.9 7051.1 7547.700000000001 8254.3 7978.5 7603.5 7847.0 7873.3 6924.1 8098.1 False True 7878.506382681407 7415.2381041216395 7529.63004770879 8013.904286929594 7674.546443789111 7913.525741263248 7892.855353294848 7690.4854291475895 7542.412581138276 6486.9111443257025 7102.085038085457 1.109323014358788 1.0440931169307148 1.0601999282366503 1.128387543088324 1.0806046960341629 1.1142538703530556 1.1113434028132338 1.0828489644811055 1.0619997565069315 0.9133812267156984 1.0 12.794026919491499 -9.78854944770665 0.7040412639524795 1.0047802220786959 1.0912628909818163 0.6085306361166067 0.03715649344350222 0.2890576688422481 0.30058301805642 0.011419059690372978 0.005644644781481655 1.6272360319829843e-10 9.78854944770665 0.0864826689031204 LSKPPFQTNPS(ph)PEMVSK ddPTM_A549_MK2206_60min_R1 4 LSKPPFQTNPSPEMVSK 17 1 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 LSKPPFQT(0.005)NPS(0.995)PEMVSK;LSKPPFQT(0.002)NPS(0.998)PEMVSK;LSKPPFQT(0.006)NPS(0.993)PEMVS(0.001)K;LSKPPFQT(0.004)NPS(0.996)PEMVSK 113.36 6.0341e-10 85698000.0 12651.5 14618.0 14584.4 14059.2 19916.800000000003 13776.0 14053.5 14392.099999999999 18988.5 18634.9 20853.9 True False 14786.763900522066 15361.993761473768 16652.687223979236 17503.704631141474 16987.065103625417 15233.767176231286 16606.839038549497 16432.22424895773 14687.635068403599 14425.263147499882 15675.301091639612 0.9433161005378425 0.9800126754609552 1.0623519846046792 1.116642323411385 1.0836834970069844 0.9718325081714815 1.0594271166763565 1.048287631152541 0.9369922135809702 0.9202542945215619 1.0 13.936205534171243 -8.750067553299113 24.958134663017567 0.9702463222986726 1.0356870593142937 0.30265583705622345 0.052648540082786424 234.87585912099897 515489.5271490779 0.009328781445713719 0.010531731833927731 1.7780028251327264e-09 8.750067553299113 0.06544073701562114 LSKPPFQTNPS(ph)PEMVSK ddPTM_A549_PD325901_60min_R1 3 LSKPPFQTNPSPEMVSK 17 1 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 LSKPPFQT(0.004)NPS(0.992)PEMVS(0.005)K;LSKPPFQT(0.012)NPS(0.931)PEMVS(0.057)K;LSKPPFQT(0.042)NPS(0.958)PEMVS(0.001)K 94.837 7.5275e-07 71749000.0 15738.5 14657.5 15894.400000000001 15915.099999999999 20155.9 17936.9 17503.1 17980.2 18246.1 17791.1 19335.4 True False 17336.26093392867 15892.738965500714 16973.089564791673 16898.139581185413 18740.219118080156 17790.827833360243 18169.19004856382 17621.570805805964 17479.27986952194 16667.766909751874 16957.268377199274 1.022349858968971 0.9372228245717968 1.000933003314005 0.9965130706963766 1.1051437472840988 1.0491564701117646 1.0714691567301073 1.0391750849152044 1.0307839376431973 0.9829275882761481 1.0 14.049616166427679 -6.540871835012747 24.983305449785437 1.0298222546683389 0.9846821303891019 0.28248185368310175 0.03679651023637337 261.71404190487345 363387.52651758183 0.005370315450789952 0.011180714739143161 2.878247691361559e-07 6.540871835012747 -0.04514012427923697 LSKPSQVSS(ph)GQK ddPTM_A549_PD325901_60min_R1 1 LSKPSQVSSGQK 12 1 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 LSKPSQVS(0.187)S(0.812)GQK 97.45 7.0756e-05 12528000.0 2587.5 2126.2 2581.2 2618.1 3159.6 3498.5 2629.7 3022.1 3279.5 2579.7 3155.3 True False 2850.181095183176 2305.3823358995483 2756.375754016525 2779.814090863489 2937.680596028261 3470.009375923976 2729.7746725270563 2961.8218447084155 3141.674019768453 2416.8173017456425 2767.218103094682 1.0299806480724136 0.833104674084545 0.9960818595881432 1.0045518594124259 1.0616006713540014 1.2539703220513543 0.986468926852657 1.0703246850676862 1.1353185411207751 0.8733743462587306 1.0 11.434220641603336 -6.380211790285235 2.05912564837416 1.0736730318807353 0.934712491216913 0.14739195013092676 0.100808864299642 0.30312661764501125 2.481287288805196 0.01224239810866664 0.035862237461786774 4.1666614035972416e-07 6.380211790285235 -0.13896054066382224 LSKS(ph)DEQLSSLDR ddPTM_A549_MK2206_60min_R1 2 LSKSDEQLSSLDR 13 1 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 LS(0.207)KS(0.793)DEQLSSLDR;LS(0.002)KS(0.998)DEQLSSLDR 109.72 1.6868e-05 25389000.0 6852.2 6672.7 6662.799999999999 6157.9 8879.4 8056.1 7607.4 8491.5 10249.9 9802.0 9818.7 True False 8008.68383979428 7012.311928593925 7607.685227772743 7666.585776438632 7573.252022470052 8908.591154793621 8989.566108219416 9695.196129128108 7928.3140157268945 7587.721392215344 7380.445807665805 1.0851219626158555 0.9501203736650281 1.0307893894256241 1.038770011491125 1.026123925278875 1.2070532576149515 1.2180248107617397 1.3136328592858246 1.0742324003642216 1.0280844260565194 1.0 12.849492247978034 -7.0488838456615355 24.991873687689903 1.086343016497118 1.022512732217093 0.14743755205390896 0.09726297448781217 898.0226600205276 459113.14188207535 0.017176743386109253 0.02975125930434728 8.935444349261477e-08 7.0488838456615355 -0.06383028428002491 LSKS(ph)DEQLSSLDR ddPTM_A549_PD325901_60min_R1 2 LSKSDEQLSSLDR 13 1 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 LS(0.055)KS(0.945)DEQLSSLDR;LS(0.243)KS(0.757)DEQLSSLDR 96.14299999999999 4.6658e-05 40495000.0 10290.5 10640.7 10254.599999999999 9993.5 12894.5 9412.8 9796.8 9641.0 10640.0 12045.1 11543.0 True False 11335.183984534297 11537.429132539897 10950.538821919215 10610.775798114772 11988.834803610074 9336.145277603891 10169.622585014662 9448.702691781815 10192.837801596697 11284.570330370374 10123.284177105792 1.1197140953692937 1.1396923103899672 1.0817180107108217 1.0481554812134446 1.1842831430854524 0.9222447097472531 1.0045774085858092 0.9333633756079307 1.006870658106013 1.1147143686720635 1.0 13.305389781971346 -7.2624443708191455 24.999149342706733 0.9925451902187256 1.110569717199132 0.5189195265447475 0.056301866886015406 41.731099607917905 1038064.323628259 0.0061098618502187455 0.010109934043746844 5.4645654152166015e-08 7.2624443708191455 0.11802452698040644 LSKS(ph)QGGEEEGPLSDK ddPTM_A549_MK2206_60min_R1 4 LSKSQGGEEEGPLSDK 16 1 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 LS(0.183)KS(0.817)QGGEEEGPLSDK;LS(0.106)KS(0.894)QGGEEEGPLSDK;LS(0.041)KS(0.959)QGGEEEGPLSDK;LS(0.237)KS(0.763)QGGEEEGPLSDK 153.76 1.7341e-16 214590000.0 14447.5 16430.6 16525.800000000003 17713.699999999997 27241.200000000004 20915.6 19429.6 19740.5 30694.8 30150.4 29816.4 True False 16885.884792537847 17266.847359233187 18869.40693659225 22053.5572951982 23234.055566199426 23128.87490934836 22959.70681918395 22538.776327745785 23742.47680952339 23339.40369963778 22412.164989223296 0.753424972583295 0.7704229987391137 0.8419270046274178 0.9839994175396473 1.0366716279918218 1.0319786116365683 1.0244305639470321 1.0056492239185 1.05935668512791 1.0413721169222312 1.0 14.451994397802121 -6.16882789296328 1.9304818506152404 1.027770228884407 0.7571442740166145 0.9785509282414242 0.015829657166379803 0.045366396028660584 0.32084956026070643 0.0031745958737733624 0.011540564416337537 6.779101041248902e-07 6.16882789296328 -0.2706259548677925 LSKS(ph)QGGEEEGPLSDK ddPTM_A549_PD325901_60min_R1 4 LSKSQGGEEEGPLSDK 16 1 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 LS(0.034)KS(0.966)QGGEEEGPLSDK;LS(0.001)KS(0.999)QGGEEEGPLSDK;LS(0.054)KS(0.946)QGGEEEGPLSDK;LS(0.003)KS(0.997)QGGEEEGPLSDK 172.61 1.2822999999999999e-28 400938800.0 15617.599999999999 15150.9 15409.800000000001 16176.699999999999 18993.2 16752.2 15897.8 17053.9 18769.899999999998 19886.100000000002 18320.0 True False 17203.08725493054 16427.719515088178 16455.601694655154 17175.898019048716 17659.183154982893 16615.775637374212 16502.79947860997 16713.74658597427 17981.06637708551 18630.48825221695 16066.756140048356 1.0707256091383461 1.0224664749930497 1.0242018706960736 1.069033342470151 1.099113162672907 1.034171147712721 1.027139475744872 1.0402688906389268 1.1191472765473487 1.1595675001114991 1.0 13.971791059460582 -6.262472382482404 24.963495337954914 1.056330744616799 1.0374648351939366 0.02907723416244834 0.04560391323163744 314.9699891131885 7611911.19223982 0.006432456558006643 0.01571078286569839 5.464212966276428e-07 6.262472382482404 -0.01886590942286248 LSKS(ph)SATLWNSPSR ddPTM_A549_PD325901_60min_R1 1 LSKSSATLWNSPSR 14 1 Q3KQU3-4;Q3KQU3;C9JIR3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LS(0.009)KS(0.495)S(0.495)AT(0.002)LWNSPSR 88.471 2.1275e-05 10824000.0 4658.3 4324.1 4536.0 5031.7 4861.1 5312.2 4743.7 5069.9 6873.1 5626.9 6827.6 True False 5131.2071867407885 4688.5070824302675 4843.840237183851 5342.4966811801805 4519.673105884599 5268.939204454296 4924.224099352243 4968.776867240388 6584.247508849081 5271.616573707237 5987.848483722387 0.8569367111892816 0.783003627292123 0.8089450243023927 0.8922230907651459 0.7548075269725117 0.8799386321777507 0.822369522665521 0.8298100529343244 1.0996015558422978 0.8803857659454504 1.0 12.547822000622892 -8.75256797955094 24.999889876564197 1.0470340686084894 0.8275129710564127 0.5122508889443478 0.06619014202951506 54.70360582596833 154156.37190603936 0.008177146532064165 0.009204512070074892 1.7677954853463125e-09 8.75256797955094 -0.2195210975520766 LSKSS(ph)ATLWNSPSR ddPTM_A549_PD325901_60min_R1 1 LSKSSATLWNSPSR 14 1 Q3KQU3-4;Q3KQU3;C9JIR3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LS(0.071)KS(0.332)S(0.505)AT(0.09)LWNS(0.001)PSR 68.08800000000001 0.00096113 13257000.0 4342.5 3573.6 4345.5 4461.2 4408.4 5106.1 3887.3 4196.8 6739.6 4355.7 5658.4 True False 4783.347403220462 3874.7598135502885 4640.411761614294 4736.758191879686 4098.769192154383 5064.51761452206 4035.2333287121814 4113.091531674089 6456.358049590325 4080.6803586515857 4962.452671552923 0.9639079140524252 0.7808154696894555 0.9351044873869092 0.9545195703392756 0.8259563291455506 1.0205674390718567 0.8131530103740854 0.8288424704284305 1.301041738211663 0.8223111893930869 1.0 12.276837627554157 -8.747227829419936 24.999928824770652 1.14215860609457 0.8899571934956048 0.08575603210149907 0.13555664553912183 148.64385054321517 261483.33888035477 0.02071154067001137 0.023430317583307596 1.7896667545913471e-09 8.747227829419936 -0.25220141259896534 LSLEGDHS(ph)TPPSAYGSVK ddPTM_A549_MK2206_60min_R1 1 LSLEGDHSTPPSAYGSVK 18 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHS(0.577)T(0.419)PPS(0.004)AYGSVK 106.03 1.5182000000000002e-09 30909000.0 2704.3 3295.4 2862.8 2830.1 3894.5 2892.6 3133.7 3348.9 5273.5 4712.6 5420.3 True False 3160.7197262128448 3463.1217842085534 3268.7880876009785 3523.474627048016 3321.624209012954 3198.6930120475213 3703.05272673018 3823.6168305761166 4079.060670049052 3648.020386957158 4074.2899173302953 0.7757719235365378 0.8499939509650276 0.802296388800646 0.8648070457776347 0.8152645679150564 0.7850921453678695 0.9088829714790225 0.9384744110408241 1.0011709409039509 0.8953757491434352 1.0 11.992332927561133 -8.20073062656783 1.6320732696206828 1.0005225218682592 0.8186944568977214 0.690774251583564 0.04262638196952714 0.07301909775748446 0.38023019037645234 0.0046050413670567 0.006091758842023995 6.2989675848739126e-09 8.20073062656783 -0.18182806497053783 LSLEGDHST(ph)PPSAYGSVK ddPTM_A549_MK2206_60min_R1 1 LSLEGDHSTPPSAYGSVK 18 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHS(0.089)T(0.911)PPS(0.001)AYGSVK 87.963 6.4946000000000005e-06 36401000.0 2746.3 3076.6 3050.2 3151.5 4268.4 3443.2 2820.4 3301.7 5282.6 5757.4 5709.3 True False 3209.8082994114316 3233.185798778916 3482.7642255136593 3923.617641476211 3640.5240143152887 3807.557138588819 3332.8301721510684 3769.7260860321817 4086.0995345787665 4456.799341312043 4291.523241336062 0.7479414927768481 0.7533888591437156 0.8115449992132362 0.9142715583324413 0.8483057901795027 0.8872274305576003 0.77660774152384 0.8784121334173571 0.9521326822190664 1.0385122229757577 1.0 12.067274096179487 -2.0000000000235216 0.08932365168993694 1.126297361574281 0.07266362107925708 0.7491008629280717 0.04663325945631928 49.918551054119256 0.3114038077562777 0.47504337354651677 6.463562472164235 0.009999999999458395 2.0000000000235216 -1.053633740495024 LSLEGDHST(ph)PPSAYGSVK ddPTM_A549_PD325901_60min_R1 3 LSLEGDHSTPPSAYGSVK 18 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YNB8;H0YKN4;H0YMD9 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHS(0.123)T(0.876)PPSAYGSVK;LSLEGDHS(0.028)T(0.972)PPSAYGSVK;LSLEGDHS(0.035)T(0.964)PPS(0.001)AYGSVK 123.19 1.6391e-10 124193000.0 9972.7 11921.3 10737.0 13536.800000000001 14502.5 15007.2 12861.2 15590.0 14125.099999999999 15864.900000000001 15273.4 True False 10985.121162486292 12925.949788805989 11465.67738682606 14372.937391696605 13483.894430908926 14884.98633882131 13350.640003918686 15279.045219881595 13531.471168358397 14863.187506479231 13394.86862605973 0.8200992088205127 0.9649926512648688 0.8559753519731857 1.0730181678478012 1.006646261888377 1.1112454145210917 0.9966980921294744 1.1406640592320703 1.0101981248276604 1.1096180127935622 1.0 13.709392811161875 -6.2576723307129285 24.997793589480413 1.0254220729015306 0.8888194239861917 0.5772625892648499 0.06300066547815646 188.2249788108017 1249036.784289906 0.007803930128385259 0.019818675778180604 5.524941313836868e-07 6.2576723307129285 -0.1366026489153389 LSLFPAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LSLFPASPR 9 0 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 LSLFPAS(1)PR;LSLFPAS(1)PR 101.38 0.000736 22203000.0 1714.55 1563.45 1200.0700000000002 1539.6999999999998 2522.33 1884.5 1541.25 1791.46 2070.99 2232.63 2391.9300000000003 True False 2003.9241232770908 1643.0229269651227 1370.2579713173498 1916.9265691197602 2151.2985983103467 2083.916539170141 1821.2751747368573 2045.404941116155 1601.9140716914544 1728.277332371123 1797.9477670903548 1.1145619244101126 0.9138324021637463 0.7621233477404398 1.0661747822752106 1.1965300870735665 1.1590528809090899 1.012974463481914 1.1376331273662437 0.8909680809492344 0.9612500229458943 1.0 10.8121353938046 -4.063807117594864 16.021520247056273 0.9907999351886128 1.0135719847187994 0.0 0.12892043463510652 0.0 0.0 0.017907692769776176 0.0 8.633619059573218e-05 4.063807117594864 0.022772049530186633 LSLFPAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LSLFPASPR 9 0 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 LSLFPAS(1)PR;LSLFPAS(1)PR 91.65799999999999 0.0010271 35191000.0 4412.0 4356.9 4399.299999999999 4769.1 5332.0 5206.3 4468.6 4906.7 5265.2 4683.1 5440.7 True False 4859.902992057265 4724.0712535418825 4697.862953139972 5063.676475588052 4957.498714401407 5163.901618943262 4638.655018311748 4808.832019268316 5043.921954226212 4387.4082667771545 4771.528391438922 1.0185212354131445 0.9900541013269066 0.9845614586657138 1.061227359492045 1.0389750008186376 1.0822321896288696 0.9721528696411876 1.0078179620383951 1.057087276956377 0.9194974663986164 1.0 12.22023574157719 -6.235692605779876 24.806634823918575 1.028856522908729 0.9969464476797449 0.0 0.04463242253806431 1023.1040955394247 985744.881589733 0.004562708402413482 0.01206544704536961 5.811756288702501e-07 6.235692605779876 -0.031910075228984036 LSLFSDGDSS(ph)ESEDTLSSSER ddPTM_A549_MK2206_60min_R1 2 LSLFSDGDSSESEDTLSSSER 21 0 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 LSLFSDGDS(0.106)S(0.889)ES(0.006)EDTLSSSER;LSLFSDGDS(0.174)S(0.772)ES(0.053)EDTLSSSER 132.79 1.4019999999999998e-17 5776600.0 2837.1 2855.5 3242.5 2982.3 5025.5 2910.0 2650.5 3417.4 5673.2 4455.2 5305.5 True False 3315.9331195645714 3000.83275317337 3702.3352571070886 3712.9636338805326 4286.255607239595 3217.934268498335 3132.0615413722876 3901.8269153485685 4388.2292582387945 3448.76722572922 3987.99792564911 0.8314781455220668 0.7524659764422863 0.9283694039295356 0.9310344947775239 1.0747888256591653 0.8069046996744776 0.7853719083523583 0.978392413459815 1.1003589620785823 0.8647866147442588 1.0 11.96144894398282 -8.500212395787111 7.143500499190187 1.0471033042171012 0.8779315334432637 0.16199829968180757 0.10177331118999865 0.13622332182719565 29.976448447665888 0.015380960043982782 0.018246622413780205 3.160731496751634e-09 8.500212395787111 -0.1691717707738375 LSLFSDGDSS(ph)ESEDTLSSSER ddPTM_A549_PD325901_60min_R1 2 LSLFSDGDSSESEDTLSSSER 21 0 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 LSLFSDGDS(0.155)S(0.807)ES(0.039)EDTLSSSER;LSLFSDGDS(0.045)S(0.938)ES(0.016)EDTLSSSER 166.57 1.5983999999999999e-28 9575500.0 3048.0 3872.1000000000004 3765.5 3647.8 4314.8 4149.0 3819.2 4524.9 4457.299999999999 4605.9 5458.3 True False 3357.4307161809925 4198.415456136134 4021.0494737909594 3873.1163212451193 4011.7433332519145 4115.211919596567 3964.5417459464284 4434.647319784623 4269.975181678283 4315.082687952191 4786.963703014511 0.701369578813958 0.8770518676572063 0.8399999923247319 0.809096655319548 0.8380559331848674 0.8596705918210912 0.828195489230433 0.9264008659585149 0.892000743391753 0.901423732382771 1.0 12.224895151576359 -14.999999999482533 0.0566839472849192 1.6495614743764069 0.5567671400021877 0.5212437306882864 0.04966428961373316 100.48195605770938 0.43203107195933227 9.259524518874622 1.8016224546622759 1.0000000011915118e-15 14.999999999482533 -1.092794334374219 LSLGGIS(ph)PAGQETVDANLQK ddPTM_A549_PD325901_60min_R1 1 LSLGGISPAGQETVDANLQK 20 0 Q5HYI7-5;Q5HYI7 Q5HYI7-5 MTX3 Metaxin-3 1 LSLGGIS(0.993)PAGQET(0.007)VDANLQK 87.287 5.136900000000001e-06 1288800.0 937.1 772.85 1107.8 1025.3 1116.6 1258.9 1073.6 1100.6 819.68 992.86 1275.6 True False 1032.2337021434419 837.9807818173109 1182.9819697425648 1088.6304523747515 1038.1738680608798 1248.6479357869641 1114.4564354964623 1078.647669596002 785.2317001139829 930.1706501574524 1118.7092866946323 0.9227005750468976 0.7490603607066058 1.057452533747918 0.9731129126417172 0.9280104137941819 1.1161505054420813 0.9961984304155233 0.9641894301092312 0.7019086276060593 0.8314677112458403 1.0 10.127619463841173 -8.605332795228485 24.999958480382624 0.8578560635970665 0.964747947560668 0.1920495919438866 0.10763394223734678 44.627152976276385 13526.783371418287 0.022790968357418725 0.02584252884637053 2.481231035747604e-09 8.605332795228485 0.1068918839636015 LSLKT(ph)PERR ddPTM_A549_MK2206_60min_R1 2 LSLKTPERR 9 2 K7EM84;L7N2F3;Q32NC0-2;Q32NC0 K7EM84 C18orf21 UPF0711 protein C18orf21 1 LS(0.013)LKT(0.987)PERR;LS(0.014)LKT(0.986)PERR 66.262 0.0018817999999999999 8848600.0 1328.6100000000001 1660.07 1652.9299999999998 1067.51 1918.1399999999999 1695.12 1350.9 1353.53 2325.9 1910.73 2156.82 True False 1552.846886604167 1744.560472267735 1887.340328922135 1329.0499979223457 1635.984146944694 1874.4964732704104 1596.341043667166 1545.397022511777 1799.0873636990782 1479.0947659403823 1621.2220687962526 0.9578249127567984 1.0760774269271207 1.1641467046667293 0.819782819086072 1.0091055250434644 1.1562243750248309 0.9846529197893534 0.9532296976806052 1.1097106302253148 0.9123332296103032 1.0 10.662866003900048 LSLKT(ph)PERR ddPTM_A549_PD325901_60min_R1 3 LSLKTPERR 9 2 K7EM84;L7N2F3;Q32NC0-2;Q32NC0 K7EM84 C18orf21 UPF0711 protein C18orf21 1 LS(0.022)LKT(0.978)PERR;LS(0.015)LKT(0.985)PERR;LS(0.014)LKT(0.986)PERR 56.225 0.005535 13766800.0 2877.39 2303.63 2187.1099999999997 2767.13 2575.68 2952.23 2156.73 2501.59 3002.5299999999997 2840.15 2631.44 True False 3169.5005145774367 2497.7649846901872 2335.5404367608403 2938.0493354918017 2394.7731224136187 2928.1880176887385 2238.8055403579415 2451.69382499061 2876.3441056793345 2660.822444296968 2307.7895620725335 1.3733923433343875 1.082319213909194 1.0120248722606167 1.2731010590295144 1.0376912877025792 1.2688280013967348 0.9701081836713742 1.0623558860318452 1.2463632529372413 1.1529744687411576 1.0 11.17229596116027 -11.08791628184997 1.4186408374973027 1.000087388427731 1.1516606593094567 0.0 0.13007206914030664 0.5901966080862829 2.12384231342927 0.08425753279064466 0.01851277039832782 8.167397976161924e-12 11.08791628184997 0.15157327088172567 LSLLEERRT(ph)PPPTK ddPTM_A549_PD325901_60min_R1 2 LSLLEERRTPPPTK 14 2 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LSLLEERRT(1)PPPTK;LSLLEERRT(1)PPPTK 103.5 8.7366e-06 10417800.0 2057.91 2253.17 2032.7200000000003 1883.52 2762.6 2158.5 2293.2 2474.8999999999996 2504.2 2038.17 2556.9 True False 2266.8275082467276 2443.052543400803 2170.6726029383526 1999.8607526157139 2568.5645064526125 2140.921891648394 2380.46898088719 2425.5361779785103 2398.957182590079 1909.4795983637316 2242.4175095245423 1.0108855726547377 1.089472648614308 0.9680055537019947 0.8918324728207025 1.1454443677605883 0.9547383047781909 1.0615636788315654 1.0816612730128006 1.0698084421837786 0.8515272424752859 1.0 11.130839199220766 -6.760182720832769 24.99999846547539 1.040091111220621 0.995576239620719 0.010163926316943628 0.08484968138071437 63.99481038978316 1273050.7245139957 0.009052192025964382 0.018045182232082704 1.737069837130871e-07 6.760182720832769 -0.044514871599902084 LSLLSS(ph)TSK ddPTM_A549_MK2206_60min_R1 2 LSLLSSTSK 9 0 Q92754-2;Q92754;C9JXZ2;H7C5E5;C1K3N0;A0A6E1XE14;P05549-2;P05549-5;P05549-6;P05549;Q6VUC0;Q7Z6R9;Q92481;Q92481-2 Q92754-2 TFAP2C;TFAP2A;TFAP2E;TFAP2D;TFAP2B Transcription factor AP-2 gamma;Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-delta;Transcription factor AP-2-beta 1 LSLLS(0.004)S(0.994)T(0.002)SK;LSLLS(0.108)S(0.867)T(0.021)S(0.004)K 196.88 3.065e-16 20454500.0 6994.700000000001 9193.8 7895.3 7570.0 11056.9 7889.6 8853.5 8186.4 11387.5 11233.2 10964.7 True False 8175.234356003769 9661.725150105178 9014.972260736344 9424.650339830214 9430.444656986863 8724.472235307378 10462.06634843975 9346.847269798534 8808.249432100794 8695.612318203777 8241.86237967483 0.9919159019403949 1.1722745060548276 1.0938028136660072 1.1435097925284756 1.1442128274603545 1.0585559226058792 1.2693813444689566 1.1340698059759764 1.0687207607133462 1.055054296908419 1.0 13.008754658761177 -9.268931504945897 1.404478311263557 1.019650583283164 1.1287066480585985 0.232945744866197 0.06746358716478656 0.2936893512102206 1.2000654687777845 0.014440781977361577 0.012578804875801508 5.383546828016024e-10 9.268931504945897 0.10905606477543461 LSLLSS(ph)TSK ddPTM_A549_PD325901_60min_R1 2 LSLLSSTSK 9 0 Q92754-2;Q92754;C9JXZ2;H7C5E5;C1K3N0;A0A6E1XE14;P05549-2;P05549-5;P05549-6;P05549;Q6VUC0;Q7Z6R9;Q92481;Q92481-2 Q92754-2 TFAP2C;TFAP2A;TFAP2E;TFAP2D;TFAP2B Transcription factor AP-2 gamma;Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-delta;Transcription factor AP-2-beta 1 LSLLS(0.078)S(0.906)T(0.015)SK;LSLLS(0.077)S(0.892)T(0.025)S(0.006)K 144.55 3.3631e-05 37060000.0 6872.3 7467.5 7367.7 7203.3 9013.8 7914.700000000001 7941.700000000001 8649.599999999999 8846.2 8517.8 7849.299999999999 True False 7569.970836880135 8096.81243219353 7867.716427579253 7648.231481118743 8380.701783921868 7850.245307310418 8243.92573936499 8477.076942520065 8474.42497748916 7979.984654343153 6883.885860812306 1.099665361968519 1.1761979492260346 1.1429179080913543 1.1110340345207645 1.217437643995587 1.1403799345365788 1.197568627088218 1.2314377538967156 1.231052511450149 1.1592267529841795 1.0 12.749007461440959 -10.86843899822187 1.1200853037228575 1.0001440399959445 1.176351494911757 0.0774692327367219 0.0629057772732975 0.23742422320712941 0.5295558542889416 0.032360070873054904 0.007863554597312217 1.3538202373240317e-11 10.86843899822187 0.17620745491581258 LSLPGLLSQVS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LSLPGLLSQVSPR 13 0 Q96Q42;Q96Q42-3 Q96Q42 ALS2 Alsin 1 LSLPGLLS(0.011)QVS(0.989)PR 118.52 1.3572e-05 25411000.0 6024.7 6216.8 6251.7 6197.0 7752.8 7731.7 6757.6 7381.1 7417.3 8347.7 8303.0 True False 6636.323108850274 6740.711553861501 6675.977956526081 6579.774615591858 7208.270073708036 7668.735598636968 7014.764165900604 7233.878170139068 7105.576675355563 7820.624797372607 7281.783637053573 0.9113595568922354 0.9256951167240385 0.9168053171142256 0.9035938093670455 0.9899044565164692 1.0531397224732657 0.9633304854329601 0.9934211905623319 0.9758016757321137 1.0739985128886724 1.0 12.830076159420459 -6.767721516784503 24.954732427467476 0.9918021038524928 0.9153472705178627 0.6293763740586666 0.032921226009779946 55.16891303312699 219150.2755022138 0.0031639460201926396 0.006085434820677423 1.7071767332588416e-07 6.767721516784503 -0.0764548333346301 LSLQES(ph)ESK ddPTM_A549_PD325901_60min_R1 1 LSLQESESK 9 0 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 LSLQES(0.99)ES(0.01)K 86.911 0.0011619999999999998 4442400.0 3158.8 3146.6 3069.8 3498.2 3038.4 3453.1 3351.6 3230.4 3166.7 3171.0 3756.5 True False 3479.4790506143463 3411.7750249936594 3278.135088207008 3714.275869011368 2824.9932659109613 3424.979098471655 3479.146972065891 3165.9671378002254 3033.6146114958888 2970.782518833753 3294.474314415482 1.0561560718167835 1.035605289154907 0.995040414752369 1.127425960724289 0.8574943970726275 1.039613234647218 1.0560552731713055 0.9609931162452979 0.9208190205708507 0.9017470574393719 1.0 11.685832563403663 -6.791657955597757 0.6100442197274124 0.9656667336155986 1.0527041936983332 0.19009317127243264 0.06806832187399416 1.4197137858479694 0.8686530334660404 0.013021307095676345 0.061887619346620015 1.6156305043950422e-07 6.791657955597757 0.08703746008273461 LSLQES(ph)ESKRR ddPTM_A549_MK2206_60min_R1 2 LSLQESESKRR 11 2 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 LSLQES(0.896)ES(0.104)KRR;LSLQES(0.973)ES(0.027)KRR 81.431 0.00016147 6675400.0 1103.48 1311.23 1385.85 1472.8899999999999 1428.4299999999998 847.05 981.1200000000001 816.29 1782.77 1436.2 1820.5 True False 1289.7204465042164 1377.9660062838452 1582.3843688702732 1833.7481161205449 1218.3098392297782 936.6842687737158 1159.3768041770154 932.0016072832805 1378.9754414986917 1111.7614225157806 1368.4196067560479 0.9424890144343997 1.0069762224106302 1.1563590298310957 1.3400481161385847 0.8903042847492391 0.6845007658098407 0.8472377905527196 0.6810788172588871 1.0077138873855127 0.8124418979579686 1.0 10.418294965005261 LSLQES(ph)ESKRR ddPTM_A549_PD325901_60min_R1 1 LSLQESESKRR 11 2 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 LSLQES(0.5)ES(0.5)KRR 62.924 0.0014389000000000001 2209800.0 491.36 509.73 529.18 499.02 542.81 495.64 472.56 474.64 530.56 506.27 725.04 True False 541.2425054798861 552.6867359975903 565.0933370178468 529.8433320433518 504.6848981928406 491.60367216891814 490.54352939475433 465.17293285212315 508.26240827209955 474.30402579942137 635.864676407241 0.8511913392296163 0.869189241837395 0.8887006276409849 0.8332642961660799 0.7936985917261647 0.7731262490418157 0.7714590031426508 0.7315596385703333 0.7993248046799533 0.7459197583978581 1.0 9.312575956150647 -10.602374548296739 0.9249479740993347 0.9980983904400126 0.812477116728644 0.0 0.08588880012585587 0.2753535514959881 0.4268446992538142 0.033016957363150655 0.009415414173981873 2.4981899201262912e-11 10.602374548296739 -0.1856212737113686 LSLS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 LSLSPLR 7 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 LSLS(1)PLR;LSLS(1)PLR 149.91 0.0031491 352390000.0 7903.700000000001 7386.4 6344.799999999999 6400.2 9403.599999999999 7358.1 6760.8 7025.700000000001 8514.4 9353.2 9151.2 True False 9237.651333087479 7762.336210134748 7244.588046042578 7968.2492873159 8020.342896873597 8136.729258088516 7989.149846787313 8021.614490303873 6585.90199470288 7240.305623920487 6878.704479728613 1.34293475760016 1.1284590336756257 1.0531907668649259 1.1583938968156215 1.1659670684369952 1.1828868767465262 1.1614323409780372 1.1661519278729577 0.9574334838938618 1.0525682045590858 1.0 12.747921161120654 -8.757539077029703 24.98425398045179 0.9798991396855099 1.1642860171221467 0.529449786691605 0.06883828968498484 44.95500874742255 287968.6797074526 0.01092325087924726 0.012159722741285921 1.74767600262679e-09 8.757539077029703 0.18438687743663684 LSLS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 LSLSPLR 7 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 LSLS(1)PLR;LSLS(1)PLR 153.73 0.002218 535890000.0 9217.2 9541.8 9234.9 9429.0 11164.099999999999 7813.3 9757.2 9140.2 10670.1 9392.5 9873.2 True False 10152.923358655995 10345.920972950009 9861.635847964983 10011.407915187297 10379.972130054157 7749.671075291359 10128.515585344709 8957.89154065181 10221.672803272268 8799.455947065917 8658.858991371466 1.1725474879280702 1.1948365232947777 1.138907084385146 1.1562040593528136 1.198769045713503 0.8949991081981921 1.1697286669568996 1.034534867651538 1.1804872689875354 1.0162373536553206 1.0 13.079961213084841 -10.961727512439367 1.1327241020409835 0.997403203747175 1.1291580085482793 0.22261499333414347 0.08534055987754263 0.6071373941646326 1.3387383601638938 0.06497501887177927 0.013873751443044252 1.0921253491445459e-11 10.961727512439367 0.13175480480110435 LSLTRS(ph)PVSPLAAQGIPLPAQLTK ddPTM_A549_PD325901_60min_R1 1 LSLTRSPVSPLAAQGIPLPAQLTK 24 1 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1-2;Q96SI1 K7EIF1 KCTD15 BTB/POZ domain-containing protein KCTD15 1 LS(0.289)LT(0.231)RS(0.305)PVS(0.175)PLAAQGIPLPAQLTK 94.495 4.4667000000000006e-08 9598800.0 6595.0 6275.7 6918.3 8031.3 9342.6 8400.4 8232.2 8592.8 9152.6 8668.9 8897.2 True False 7264.519545017604 6804.575263571068 7387.81744111752 8527.375160594303 8686.408006220288 8331.989927543738 8545.48087583269 8421.409863078801 8767.94805102386 8121.544174556275 7802.900803997712 0.931002421727023 0.8720571277908383 0.9468039677413905 1.0928467982350125 1.1132280448535143 1.0678067217354545 1.0951671808328678 1.0792665541466584 1.1236780104306492 1.0408365271535056 1.0 12.929794844219417 -6.135297758434185 4.027584702388661 1.0700288657359451 0.9029955155627346 0.8039003141035301 0.03541237527473657 0.10133434519220381 2.800786995656168 0.006850114784843301 0.01947032326135498 7.323222704816669e-07 6.135297758434185 -0.16703335017321053 LSLVIRS(ph)PSLLQSGAK ddPTM_A549_MK2206_60min_R1 2 LSLVIRSPSLLQSGAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 LS(0.003)LVIRS(0.824)PS(0.173)LLQSGAK;LS(0.002)LVIRS(0.907)PS(0.091)LLQSGAK 110.9 1.2043e-07 61987000.0 9274.5 10858.5 10142.5 9731.3 12617.400000000001 11446.1 10928.0 9794.900000000001 14865.199999999999 15968.4 15331.300000000001 True False 10839.808860245173 11411.15126959659 11580.859011629504 12115.468936854655 10761.397174168718 12657.318704693746 12913.476145676803 11183.357070623193 11498.255934846518 12361.127349464552 11524.115087645689 0.940619629169261 0.9901976145508821 1.0049239289569962 1.0513144692422347 0.9338154897208 1.0983332436746398 1.12056119254836 0.9704308734830493 0.9977560834300507 1.0726313695631324 1.0 13.492368352965027 -5.290547736912637 2.0755344865032597 1.0112051422829798 0.9235882966598247 0.1349606054733038 0.05470465437075674 1.0261537480066862 5.023215428857184 0.007145954835817057 0.1641824159756821 5.122149653701449e-06 5.290547736912637 -0.08761684562315508 LSLVIRS(ph)PSLLQSGAK ddPTM_A549_PD325901_60min_R1 2 LSLVIRSPSLLQSGAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 LSLVIRS(0.856)PS(0.144)LLQSGAK;LSLVIRS(0.715)PS(0.285)LLQSGAK 130.07 1.3301e-10 135197000.0 9315.900000000001 9208.3 9894.4 9529.7 12010.2 10508.0 10034.2 11123.7 11319.4 10177.099999999999 10374.0 True False 10261.643309996896 9984.315757531664 10565.89348386065 10118.327925481004 11166.644984940698 10422.4263319163 10416.056971924929 10901.829077126169 10843.684982273835 9534.516169165247 9098.06376620423 1.127893096123915 1.0974110551543412 1.1613342965465725 1.1121408011083258 1.227364994562958 1.1455653202422653 1.144865241615093 1.1982581522040137 1.1918673314374768 1.0479720096689438 1.0 13.151343830839712 -10.792042483127618 1.003867419228997 0.9986223515814665 1.1577476510034541 0.628057565100764 0.038733655246506245 0.2403989518712871 0.4241602462162034 0.02748879140754748 0.006661841804306173 1.614200646355299e-11 10.792042483127618 0.1591252994219876 LSMEDS(ph)KSPPPK ddPTM_A549_PD325901_60min_R1 2 LSMEDSKSPPPK 12 1 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.085)MEDS(0.603)KS(0.312)PPPK;LS(0.005)MEDS(0.637)KS(0.357)PPPK 65.374 0.0013477 404610000.0 19447.4 21067.0 20954.5 23849.0 24507.0 22103.6 20854.8 21851.3 23559.0 24177.0 24198.0 True False 21421.6857315808 22842.39002464294 22376.59837964484 25322.098564991167 22785.71286456026 21923.595610025215 21648.440826184455 21415.458679486757 22568.897158629374 22650.46009392736 21221.79940376036 1.0094189151455755 1.0763644302751925 1.0544156955738568 1.1932116633099576 1.0736937255434986 1.0330695900433637 1.0201039230607607 1.0091254879966531 1.0634770751169345 1.0673204313633202 1.0 14.373259367603307 -7.232137047858153 4.743938889515631 1.0282012668924576 1.0864413806039648 0.22362721731588353 0.04526969177207435 0.21703450072813293 12.662941392273707 0.006827257361009353 0.011763085977211166 5.859532293830826e-08 7.232137047858153 0.05824011371150717 LSMEDS(ph)KSPPPKATEEK ddPTM_A549_MK2206_60min_R1 2 LSMEDSKSPPPKATEEK 17 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.028)MEDS(0.485)KS(0.485)PPPKAT(0.002)EEK;LS(0.003)MEDS(0.498)KS(0.498)PPPKATEEK 50.883 0.009610200000000001 18661000.0 2702.8 2437.0 2755.5 2775.9 3424.4 2986.9 2590.3 2308.7 3436.1 3883.4 3888.4 True False 3158.966562884327 2561.032890731398 3146.271334142973 3455.9956246148854 2920.675296275251 3302.9717754562453 3060.9239806137102 2635.9652950972213 2657.8288363241772 3006.137242861566 2922.802965619452 1.0808003823873302 0.8762249528471443 1.0764568707340694 1.182425112218411 0.999272044893471 1.1300699411861383 1.047256355155978 0.9018621255362524 0.9093424591352443 1.02851176703403 1.0 11.513136860947727 -8.18336711823566 7.655616464050544 0.9518976265540894 1.0557970550275646 0.24813024622812085 0.08010778462519279 0.3013021004255675 26.549780635118267 0.0128233044770411 0.01657073108410244 6.5559084730949024e-09 8.18336711823566 0.10389942847347522 LSMEDS(ph)KSPPPKATEEK ddPTM_A549_PD325901_60min_R1 2 LSMEDSKSPPPKATEEK 17 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.073)MEDS(0.827)KS(0.1)PPPKATEEK;LSMEDS(0.988)KS(0.012)PPPKATEEK 111.49 1.7105999999999999e-09 419400000.0 22043.0 23864.0 24198.0 24598.0 28253.0 29597.0 27036.0 30311.0 29069.0 30247.0 30742.0 True False 24280.789132801056 25875.103030715294 25840.221794394813 26117.362593888738 26268.6067475587 29355.97184485406 28064.86977466687 29706.42332648052 27847.331020170517 28337.1992580147 26960.92888959422 0.9005917130018624 0.9597259477473713 0.9584321779198063 0.9687115269967178 0.9743212800689992 1.0888338441552816 1.0409459514393335 1.1018323384972817 1.0328772845403857 1.0510468453834194 1.0 14.718582582349837 -7.048345008371417 7.087017113886979 1.0299295624287237 0.9512472186145712 0.6545112744793791 0.03452503073251029 0.1596638209298088 19.896123987987078 0.0056361799942094915 0.009882384464095225 8.946537602644105e-08 7.048345008371417 -0.07868234381415251 LSMEDSKS(ph)PPPK ddPTM_A549_MK2206_60min_R1 6 LSMEDSKSPPPK 12 1 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.03)MEDS(0.262)KS(0.708)PPPK;LS(0.01)MEDS(0.293)KS(0.697)PPPK;LS(0.029)MEDS(0.157)KS(0.814)PPPK;LS(0.008)MEDS(0.112)KS(0.88)PPPK;LSMEDS(0.102)KS(0.898)PPPK;LSMEDS(0.014)KS(0.986)PPPK 123.76 2.1305e-06 617811600.0 47960.520000000004 51556.4 47476.64 42897.979999999996 59721.8 48962.299999999996 45408.6 49349.46 63877.299999999996 68723.3 66500.8 True False 56055.08325386448 54180.400544810924 54209.54145288537 53407.987025763505 50936.802332990104 54143.45808745565 53658.75484156108 56344.89708138279 49409.19354108736 53198.65879959524 49986.81603128947 1.1213973544299471 1.083893811338103 1.0844767832172522 1.0684414664925355 1.0190047371912223 1.0831547673203332 1.0734581456032957 1.1271951597419898 0.9884445032498062 1.0642537977673014 1.0 15.609260015349442 -8.779769678368002 24.998339318498207 0.9945432249830151 1.0798498795152627 0.37175572416176683 0.03413360207681554 98.9340662673054 134922.89548096553 0.004692409437211981 0.004999965431943039 1.6604672781448655e-09 8.779769678368002 0.08530665453224762 LSMEDSKS(ph)PPPK ddPTM_A549_PD325901_60min_R1 6 LSMEDSKSPPPK 12 1 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.003)MEDS(0.27)KS(0.727)PPPK;LS(0.004)MEDS(0.151)KS(0.845)PPPK;LS(0.004)MEDS(0.115)KS(0.881)PPPK;LS(0.014)MEDS(0.213)KS(0.773)PPPK;LSMEDS(0.013)KS(0.987)PPPK;LSMEDS(0.061)KS(0.939)PPPK 133.66 1.3784000000000001e-08 582328800.0 42639.3 46707.12 44647.2 44793.240000000005 53210.0 48616.3 46798.119999999995 48367.3 51375.85 50444.76 53249.0 True False 46968.01034660636 50643.292921051914 47677.227477423934 47560.016701970955 49472.713164534696 48220.38497148288 48579.048065513874 47402.57625808719 49216.701688830944 47259.669244643424 46699.71057322242 1.0057452127666457 1.0844455415124294 1.0209319692178567 1.0184220869506166 1.0593794384863342 1.0325628227583152 1.040243022263377 1.0150507503416475 1.0538973600631214 1.0119906240220273 1.0 15.511125988245187 -10.952884894899352 1.1443421456170042 0.9994192473964447 1.0386856650571668 0.2183101510393175 0.021897938683414078 0.47878941784771056 1.0867598216791563 0.015264745660566311 0.003340622508868131 1.1145899045632426e-11 10.952884894899352 0.03926641766072203 LSMEDSKS(ph)PPPKATEEK ddPTM_A549_MK2206_60min_R1 2 LSMEDSKSPPPKATEEK 17 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.015)MEDS(0.177)KS(0.805)PPPKAT(0.003)EEK;LS(0.032)MEDS(0.027)KS(0.939)PPPKAT(0.002)EEK 56.528999999999996 0.0035765999999999997 166808000.0 4568.6 6108.9 6189.1 4743.5 7144.3 5825.200000000001 5548.9 4994.6 8361.1 8532.6 7928.6 True False 5339.667988453951 6419.816916778424 7066.8074447992285 5905.657712943805 6093.382933996982 6441.618797545188 6557.063303875002 5702.599845320998 6467.3241999330885 6605.079733851932 5959.709801772039 0.8959610729479266 1.0772029394568134 1.185763683107189 0.9909304159722403 1.022429470002918 1.0808611512644222 1.1002319780613057 0.9568586449671437 1.085174348256037 1.1082888183394435 1.0 12.541026367407015 -11.097968186425069 1.417160493700032 0.9998663520963775 1.052023175565976 0.0 0.08090346021468967 1.053096419431375 3.7637407320626277 0.05203360417649555 0.011223466183784853 7.980531452836865e-12 11.097968186425069 0.05215682346959838 LSMEDSKS(ph)PPPKATEEK ddPTM_A549_PD325901_60min_R1 3 LSMEDSKSPPPKATEEK 17 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.001)MEDS(0.021)KS(0.978)PPPKATEEK;LS(0.186)MEDS(0.157)KS(0.643)PPPKAT(0.014)EEK;LS(0.006)MEDS(0.023)KS(0.738)PPPKAT(0.233)EEK 73.21 0.00029171 145923000.0 7289.999999999999 7758.0 7612.5 8394.199999999999 9520.6 9349.2 9491.0 10084.0 8594.9 10182.8 9118.8 True False 8030.075433385648 8411.793886703372 8129.13002768124 8912.690669388601 8851.905900286958 9273.063214917387 9852.185198674477 9882.866709255035 8233.686242569873 9539.856270192484 7997.245408835857 1.0041051665756708 1.0518364082474567 1.0164912556890737 1.114470072350325 1.1068693591054264 1.1595321564937755 1.2319473387410578 1.2357838485656356 1.0295652842505971 1.1928927752613736 1.0 12.965287444743726 -8.97124242408516 24.97482338908186 1.013043428472029 1.1159251022717536 0.0 0.08986203785817438 181.10965918206387 157287.927228721 0.01378149599125035 0.014464273306022978 1.0684582970826346e-09 8.97124242408516 0.10288167379972446 LSMEDSKS(ph)PPPKATEEKK ddPTM_A549_MK2206_60min_R1 1 LSMEDSKSPPPKATEEKK 18 3 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.016)MEDS(0.113)KS(0.852)PPPKAT(0.019)EEKK 44.729 0.0080094 6446600.0 1139.7 1432.7 1271.4 1581.9 1848.2 1473.0 1464.0 1038.6 2183.9 1930.6 2752.2 True False 1332.053497010235 1505.618310443526 1451.7036378985215 1969.4655710141901 1576.332228295735 1628.8718823017332 1729.9898496770543 1185.8247305791024 1689.2501369716738 1494.476119140067 2068.752783144188 0.6438920628233391 0.72779034919543 0.7017289111230361 0.952006246015004 0.7619722574584049 0.7873690348955552 0.8362477449082796 0.5732075578295199 0.8165548589156563 0.7224044029411246 1.0 11.0145455374765 -10.035599876295969 0.7971194568166122 0.9881641393365052 0.7570782813716013 0.0 0.12374230289862675 0.38168545986608843 0.4870976882612148 0.044565133440272964 0.019640311493465908 9.212979900901705e-11 10.035599876295969 -0.23108585796490388 LSMPQSAAVS(ph)TTPPHNRR ddPTM_A549_PD325901_60min_R1 1 LSMPQSAAVSTTPPHNRR 18 1 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 LSMPQS(0.004)AAVS(0.332)T(0.332)T(0.332)PPHNRR 54.008 0.0026993000000000004 3940500.0 1222.0 1005.5 849.72 1002.6 1015.2 1376.4 1144.7 1414.0 1231.5 1342.3 1662.5 True False 1346.0565404111471 1090.237013802557 907.387108981452 1064.5283249301922 943.8958542498707 1365.1910547439652 1188.2621849038753 1385.7966607384594 1179.74433765661 1257.546948921649 1458.0230394558064 0.9232066325327413 0.7477501961899572 0.6223407205692209 0.73011762923 0.6473806165656827 0.9363302347084379 0.8149817614318243 0.9504628001322223 0.8091397088601142 0.8625014247998555 1.0 10.509797801752189 -7.271570995656206 24.805300838377473 0.9049017465691598 0.7284775508002458 0.44632352412484555 0.08908437641882375 461.9773049219524 1131060.928552507 0.014913163977608161 0.02401060232464441 5.3509267312778075e-08 7.271570995656206 -0.176424195768914 LSMPQSAAVSTT(ph)PPHNR ddPTM_A549_PD325901_60min_R1 2 LSMPQSAAVSTTPPHNR 17 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 LSMPQSAAVS(0.005)T(0.05)T(0.946)PPHNR;LSMPQSAAVS(0.014)T(0.233)T(0.753)PPHNR 121.14 7.0954e-10 27516000.0 3798.3 3431.6 3860.6 4920.0 4749.2 4570.7 4483.0 4565.7 5285.2 4994.1 4824.3 True False 4183.900619839325 3720.7929752012456 4122.60353167372 5223.897225869282 4415.632575850557 4533.477734610753 4653.603018191731 4474.633531777642 5063.081423778085 4678.771673701563 4230.941683757381 0.9888816562755648 0.8794243110193175 0.9743938441648647 1.2346890163775752 1.0436524315147633 1.0715056064267703 1.0998976979656683 1.0575975435813252 1.1966795579374907 1.1058464104252264 1.0 12.04676308542753 -6.019287435816158 23.833174919758537 1.0955861301642256 0.932341971401963 0.5136971034418674 0.06711400983363769 278.7960752152896 344506.01970937685 0.011204591878210263 0.03020845118569036 9.565607663755637e-07 6.019287435816158 -0.16324415876226261 LSMPQSAAVSTT(ph)PPHNRR ddPTM_A549_MK2206_60min_R1 1 LSMPQSAAVSTTPPHNRR 18 1 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 LS(0.011)MPQS(0.233)AAVS(0.134)T(0.134)T(0.487)PPHNRR 52.541000000000004 0.0055068 5694000.0 505.64 766.38 468.03 735.79 668.18 777.95 406.8 439.33 1236.5 1030.6 888.03 True False 590.9796702888965 805.3854685263553 534.4036917143657 916.0585830308681 569.8916071326936 860.2721526385842 480.7102942955094 501.60637289169733 956.4347242847539 797.786744217214 667.5076426188258 0.885352664982699 1.2065561756964982 0.8005956150820165 1.3723566960775235 0.8537604227224183 1.2887824763526115 0.7201569893784942 0.7514616176134707 1.4328446046436014 1.1951724493928872 1.0 9.382640544784891 -8.764123333137793 24.99858682198983 1.204398819771139 0.9959758915708721 0.1598262660587908 0.22809357036384598 107.59447871386966 1002141.5644879835 0.04203811985189384 0.04574550852146608 1.7213796594876551e-09 8.764123333137793 -0.20842292820026698 LSNKS(ph)MVS(ph)QSEPK ddPTM_A549_MK2206_60min_R1 2 LSNKSMVSQSEPK 13 1 Q96L42 Q96L42 KCNH8 Potassium voltage-gated channel subfamily H member 8 2 LS(0.319)NKS(0.681)MVS(0.595)QS(0.405)EPK;LS(0.331)NKS(0.669)MVS(0.588)QS(0.412)EPK 56.122 0.012081999999999999 72910000.0 30541.0 34434.0 33600.0 28387.0 50517.0 40576.0 37818.0 38595.0 54246.0 47269.0 45336.0 True False 35695.574144239385 36186.54352049441 38364.98523941349 35341.81627434083 43086.01621946524 44869.72538783108 44689.04107587897 44065.959442230356 41959.36761306168 36590.90007025372 34077.81999005335 1.0474723487200244 1.0618796487291895 1.1258051498191926 1.0370914654944599 1.2643419160040519 1.3166841482503187 1.3113820393711462 1.293097958000023 1.2312808631922112 1.0737453299810227 1.0 15.05654542667027 -6.733098484389002 24.997848998130365 1.166168069125787 1.0717450308383394 0.24915687472398862 0.10211172545422388 422.0817697679981 372291.75837483275 0.019497576893361745 0.04058115554028091 1.8488493103081113e-07 6.733098484389002 -0.09442303828744758 LSNPPATCT(ph)PGKPSSK ddPTM_A549_MK2206_60min_R1 1 LSNPPATCTPGKPSSK 16 1 Q6NXT6-2;Q6NXT6 Q6NXT6-2 TAPT1 Transmembrane anterior posterior transformation protein 1 homolog 1 LS(0.038)NPPAT(0.172)CT(0.788)PGKPS(0.002)SK 57.496 0.0034007 2016900.0 965.68 1387.9 794.35 942.4 1405.8 1006.3 951.99 1117.6 1787.9 1447.9 1290.9 True False 1128.6631753907561 1458.5381817997977 907.0007745514317 1173.2880423059437 1199.0086822519997 1112.785998072121 1124.9542602418426 1276.023222506455 1382.9435046896174 1120.818384389777 970.3339029724702 1.1631698860910336 1.5031301877959617 0.9347305827127887 1.2091590726777188 1.2356660718326127 1.1468072945439405 1.1593475779787932 1.3150351838656282 1.4252243484981617 1.1550852556592328 1.0 9.92233747034285 -11.108598270731164 1.4750428295423155 1.000953934095449 1.2550055582631332 0.09529845232392464 0.15045220605975748 0.430634548093055 1.685971399507958 0.10566775066487655 0.023338313283299657 7.787565801304088e-12 11.108598270731164 0.25405162416768423 LSNPPATCT(ph)PGKPSSK ddPTM_A549_PD325901_60min_R1 1 LSNPPATCTPGKPSSK 16 1 Q6NXT6-2;Q6NXT6 Q6NXT6-2 TAPT1 Transmembrane anterior posterior transformation protein 1 homolog 1 LS(0.001)NPPAT(0.059)CT(0.932)PGKPS(0.004)S(0.004)K 60.333999999999996 0.0016755 2574700.0 1528.5 1246.4 1294.3 1085.0 1575.0 1298.4 1438.1 1609.7 1253.8 1198.4 1294.3 True False 1683.672194777772 1351.438502241181 1382.1389812581706 1152.0179857862145 1464.3774334550294 1287.8262608831474 1492.8276824585157 1577.5932707147783 1201.107146206949 1122.7328194797763 1135.1093052436995 1.4832687803720366 1.190580057795436 1.2176263333172443 1.014896081341598 1.2900761421743772 1.1345394271141673 1.3151400270989908 1.3898161731447358 1.05814227815627 0.989096657293928 1.0 10.148615513050713 -8.905393834218446 7.726285482732497 1.0254870339314155 1.2421944832372187 0.4424398968485913 0.11912213824628215 0.16702314018111844 11.96537501247073 0.020241888480896676 0.021485116499055157 1.243386551683172e-09 8.905393834218446 0.2167074493058032 LSNRPAFMPSEGK ddPTM_A549_PD325901_60min_R1 1 LSNRPAFMPSEGK 13 1 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 47.773999999999994 0.034232 5471700.0 4003.6 4299.1 4458.2 4529.1 6058.0 5337.7 4897.4 5123.3 5430.7 5193.1 5239.6 False True 4410.042524705456 4661.400244692762 4760.760261334447 4808.852220667596 5632.50697896544 5294.231540908794 5083.77323696011 5021.111762348904 5202.466564767965 4865.20677974001 4595.162416560987 0.9597141787223107 1.0144146870397992 1.0360374301845445 1.0465032102753256 1.2257470940887438 1.1521315376858843 1.1063315670058074 1.092695166606689 1.1321616285026728 1.0587670986787716 1.0 12.165900139305027 -5.825819081660054 1.6528418556618918 1.0857819526824337 0.9696323835992413 0.37164478836798964 0.057766099002616124 0.5175732943589143 2.4668892081552136 0.010465317862681327 0.06790483549471714 1.4934164072308263e-06 5.825819081660054 -0.1161495690831924 LSPAT(ph)PTSEGPK ddPTM_A549_PD325901_60min_R1 1 LSPATPTSEGPK 12 0 Q8N1G0;F8WCX2;Q8N1G0-2 Q8N1G0 ZNF687 Zinc finger protein 687 1 LSPAT(0.458)PT(0.458)S(0.083)EGPK 95.417 1.5586e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LSPHAFKTES(ph)GEETDLISPPQEEVK ddPTM_A549_PD325901_60min_R1 1 LSPHAFKTESGEETDLISPPQEEVK 25 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 LSPHAFKT(0.021)ES(0.978)GEET(0.001)DLISPPQEEVK 146.89 1.5105e-32 12886000.0 2224.9 2753.4 2890.6 2640.2 3677.8 3180.1 3505.0 3162.5 3422.3 3151.0 3263.0 True False 2450.7702101151895 2985.4386810581395 3086.77349858987 2803.2791576707486 3419.4840157212125 3154.202319958795 3638.384693009593 3099.421456566746 3278.47263236883 2952.0453222469755 2861.6716858612317 0.8564120832672041 1.043249893343254 1.078660949766113 0.9795949589608811 1.1949253412318348 1.1022236881829879 1.2714193284246744 1.083080729309436 1.1456494637616546 1.0315807144587048 1.0 11.48264244856814 -4.495964101633639 1.117913025858827 1.092035713190239 7.548361433881955e-11 0.43275599785727425 0.07997852978936089 6.294139121720229 1.8146784269371172 0.012828611569496457 12.270167070723376 3.191801675469765e-05 4.495964101633639 -1.0920357131147553 LSPHKVQGR ddPTM_A549_MK2206_60min_R1 2 LSPHKVQGR 9 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 0 ; 65.22399999999999 0.021097 4227100.0 562.01 684.59 596.27 430.22 530.36 470.24 525.23 622.64 508.4 809.13 766.73 False True 656.8635481747152 719.4327068796912 680.8300520447937 535.6239193133099 452.3447465636439 520.0004846799504 620.6574923127591 710.9011267550281 393.24821174797347 626.3469710348093 576.3297803285163 1.1397355656344765 1.2483004200643668 1.1813202705865913 0.9293705402625498 0.7848713740001443 0.9022620423736261 1.0769137974424563 1.233497124423805 0.6823319307286468 1.086785712648377 1.0 9.170750758904532 -6.276741237498182 4.417566633507893 0.8929554733248399 1.199281699791618 0.22589264664583963 0.1540808472497126 0.16290814852020963 8.163753703760582 0.024209350386002526 0.0617032430400673 5.287602052598594e-07 6.276741237498182 0.3063262264667781 LSPHKVQGR ddPTM_A549_PD325901_60min_R1 2 LSPHKVQGR 9 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 0 ; 80.23899999999999 0.0060209 7000300.0 585.71 685.6199999999999 721.62 726.59 1143.71 822.47 650.3 726.3199999999999 688.1 759.06 727.2 False True 645.1708480230873 743.3996035835994 770.5934726535738 771.4698140943825 1063.3797551853024 815.7720770090594 675.0475223578145 711.8329778129822 659.1815499322073 711.1328220580101 637.7590101006087 1.0116216906466116 1.1656434355452312 1.2082831609576319 1.209657255916589 1.6673692387623822 1.2791227784933505 1.0584680289367034 1.1161472696413777 1.0335903366198136 1.1150494321449513 1.0 9.316867565783019 -7.804854237585306 5.172733858336991 1.027107259108099 1.267373026080964 0.26543734610100267 0.15359719717818274 0.16731360836974238 10.232314298047651 0.024464646124811435 0.0344998810135324 1.567277007594201e-08 7.804854237585306 0.24026576697286495 LSPLLPGGGGRGS(ph)R ddPTM_A549_MK2206_60min_R1 2 LSPLLPGGGGRGSR 14 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 LSPLLPGGGGRGS(1)R;LSPLLPGGGGRGS(1)R 52.861999999999995 0.0058649999999999996 11982100.0 1057.3899999999999 1195.82 1180.38 1098.25 1941.33 1419.17 1543.91 1498.56 2122.4700000000003 1689.85 1652.21 True False 1235.8515812965277 1256.6821302398102 1347.7756332410388 1367.3212993023162 1655.7629286643007 1569.3456274311966 1824.4184623052602 1710.9854691475261 1641.7339338881225 1308.111711348205 1241.9206583237626 0.9951131523688265 1.0118860023924325 1.0852348933950016 1.1009731500463231 1.3332276241375247 1.2636440314547661 1.469029804824813 1.377693057668327 1.3219314155736754 1.053297328280038 1.0 10.278357292762218 -6.3560841522074085 2.339461170074658 1.2156104887039407 1.0185874493344207 0.3386307006636886 0.13414007373848646 0.39974410813731087 4.228234161403207 0.024841856325564408 0.07030044699347715 4.404695065098898e-07 6.3560841522074085 -0.19702303936952004 LSPLLPGGGGRGS(ph)R ddPTM_A549_PD325901_60min_R1 3 LSPLLPGGGGRGSR 14 1 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 LSPLLPGGGGRGS(1)R;LSPLLPGGGGRGS(1)R;LSPLLPGGGGRGS(1)R 69.52199999999999 0.00077492 20455300.0 2505.74 2415.04 2705.67 3248.1099999999997 3087.19 2670.09 2918.02 2956.7200000000003 2845.76 3266.5099999999998 3198.76 True False 2760.1208801717053 2618.5638963836177 2889.2930367154413 3448.738377706968 2870.356424627324 2648.345672305518 3029.0668479018113 2897.7459000980307 2726.162603596973 3060.2620011339145 2805.33279861032 0.983883581134826 0.9334236200713077 1.029928797804921 1.229350891778463 1.0231785783309613 0.9440397494434283 1.0797531221259462 1.03294193884358 0.9717786798583877 1.0908730695516335 1.0 11.453956213579827 -8.748267378260534 22.749384180262773 0.9866732689166003 1.0336392116680437 0.0 0.08110438560767882 167.12126085137973 288633.81891904125 0.013087534129197229 0.014784047805343821 1.7853880422779768e-09 8.748267378260534 0.04696594275144339 LSPLPPGS(ph)PGSAAR ddPTM_A549_MK2206_60min_R1 2 LSPLPPGSPGSAAR 14 0 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 LSPLPPGS(0.639)PGS(0.361)AAR;LSPLPPGS(0.59)PGS(0.41)AAR 102.9 2.6508e-05 10186900.0 3336.1 4317.0 3840.0 3937.6 5236.8 3715.8 3506.6000000000004 3611.1 5923.1 6298.0 5729.7 True False 3899.1521201858795 4536.7168606021505 4384.569741647253 4902.312176765579 4466.473657147012 4109.003489651584 4143.703829834399 4122.98448352994 4581.527307247092 4875.277425849035 4306.857358324706 0.9053357926166803 1.0533705862891303 1.0180438720990694 1.1382573809392413 1.0370609670909543 0.9540607333347849 0.9621177311166461 0.9573069504056457 1.0637750280704044 1.1319802399365821 1.0 12.072419827455846 -11.482405272811723 2.4739573796223127 0.9996245464240914 1.022646379367987 0.0 0.07375976532153547 1.5180090901477534 16.865152525408725 0.05353276853592703 0.00920529546027692 3.29302272059889e-12 11.482405272811723 0.023021832943895593 LSPLPPGS(ph)PGSAAR ddPTM_A549_PD325901_60min_R1 2 LSPLPPGSPGSAAR 14 0 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 LSPLPPGS(0.992)PGS(0.008)AAR;LSPLPPGS(0.972)PGS(0.028)AAR 154.13 6.9514e-19 27032000.0 16159.199999999999 18184.5 15536.5 17877.699999999997 18864.6 18086.8 17919.4 19158.800000000003 19846.4 20977.2 20367.7 True False 17799.670088225685 19716.97163350831 16590.90031856414 18981.96492579742 17539.615575336993 17939.50709745944 18601.332572871932 18776.662704212158 19012.32482571509 19652.696012008662 17862.602021488132 0.9964768887989139 1.1038129612801892 0.9288064694385413 1.0626651650729682 0.98191828683399 1.0043053680465361 1.04135626772041 1.0511717543516024 1.0643647998675603 1.1002146265346506 1.0 14.124654630785148 -7.7655092721661205 24.906839481775112 1.0338027775695742 1.0141435593668366 0.08673739253011903 0.04858981583604163 298.2771255294336 1825382.3844918131 0.006875992963563931 0.00968524149421963 1.7158950754533008e-08 7.7655092721661205 -0.019659218202737527 LSPLPPGSPGS(ph)AAR ddPTM_A549_MK2206_60min_R1 1 LSPLPPGSPGSAAR 14 0 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 LSPLPPGS(0.123)PGS(0.877)AAR 84.859 0.00021399 4802300.0 3119.2 3355.1 3067.1 2777.9 4457.9 3634.6 3135.0 3099.1 5007.8 4305.4 5028.4 True False 3645.6447028817474 3525.8602592092348 3502.060899637058 3458.48562470467 3802.148815344421 4019.2109595477805 3704.5889199027074 3538.4069155957027 3873.5412958133375 3332.807149769837 3779.7095032200523 0.9645303957290657 0.9328389539475043 0.9265423431757237 0.915013606669581 1.005936782206477 1.0633650432986157 0.9801253024198427 0.9361584303188443 1.024825133390105 0.8817627775178264 1.0 11.884059642291316 -6.771496444662614 24.70592516587881 1.0073703503344735 0.9340112294924808 0.09256045533841539 0.04902377346885587 101.46115820832911 249247.2798244966 0.004650956341289531 0.008863481991075114 1.6924020991734144e-07 6.771496444662614 -0.0733591208419927 LSPPSSSAASSYSFSDLNS(ph)TRGDADMYDLPK ddPTM_A549_PD325901_60min_R1 1 LSPPSSSAASSYSFSDLNSTRGDADMYDLPK 31 1 P50402 P50402 EMD Emerin 1 LS(0.013)PPS(0.013)S(0.012)S(0.012)AAS(0.065)S(0.065)Y(0.014)S(0.065)FS(0.065)DLNS(0.338)T(0.338)RGDADMY(0.002)DLPK 43.896 0.010551999999999999 2431600.0 937.71 846.41 605.32 608.34 846.77 1021.1 986.39 911.44 794.36 1028.3 988.37 True False 1032.905628894383 917.7399411761528 646.4006552848608 645.9157801596182 787.2957963979142 1012.784500144626 1023.9276112233184 893.2606141891517 760.9758116613106 963.3729625092235 866.806755793645 1.191621571925404 1.0587595620847159 0.745726369763949 0.7451669888846448 0.9082714124407915 1.1684086370754279 1.1812639949786894 1.0305187496736636 0.8779071074089217 1.1114045386357918 1.0 9.75956658745182 LSPPVASGGIPHQS(ph)PPTK ddPTM_A549_MK2206_60min_R1 1 LSPPVASGGIPHQSPPTK 18 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LS(0.001)PPVAS(0.001)GGIPHQS(0.936)PPT(0.063)K 46.353 0.007667 1912100.0 2196.5 2562.8 2446.0 2647.3 3267.0 2685.2 2433.4 2157.0 3676.4 3376.7 3670.6 True False 2567.2155007308793 2693.2355733961513 2792.8795802263517 3295.888618841812 2786.42862776873 2969.346081708498 2875.5172815602077 2462.761355535454 2843.7012700044233 2613.90112478 2759.0887165936524 0.9304577577702329 0.9761322849818317 1.0122471102250084 1.1945569560774718 1.0099090366361367 1.076205365869651 1.042198195464442 0.8925995531509978 1.0306668476812275 0.9473784257314858 1.0 11.429976130962535 LSPPYS(ph)SPQEFAQDVGR ddPTM_A549_MK2206_60min_R1 1 LSPPYSSPQEFAQDVGR 17 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LSPPYS(0.5)S(0.5)PQEFAQDVGR 73.296 0.00057587 2269200.0 1021.3 1103.5 1304.8 872.7 1450.3 1205.2 919.47 1037.4 1997.7 1739.5 1874.8 True False 1193.670471612314 1159.6634365704128 1489.8402601305568 1086.5115391769912 1236.962791200793 1332.7334640529868 1086.525797187541 1184.4546269042569 1545.224139671373 1346.5457418647823 1409.2354181522855 0.8470341124248716 0.8229025623631443 1.0571975703562404 0.7709936361105423 0.8777545435400941 0.9457138579446123 0.7710037536610709 0.8404945062034069 1.0964982285907834 0.9555151144514246 1.0 10.460696924152407 -8.75685699772363 24.9986601713108 1.045568611104759 0.8681616401207242 0.38046674457212326 0.08353684078681343 67.45449183589926 367989.8392725695 0.013519565908924705 0.015080631235032355 1.7504229641065954e-09 8.75685699772363 -0.1774069709840349 LSPPYSS(ph)PQEFAQDVGR ddPTM_A549_MK2206_60min_R1 1 LSPPYSSPQEFAQDVGR 17 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LSPPYS(0.139)S(0.861)PQEFAQDVGR 96.414 2.3463e-06 1513200.0 1217.8 1101.3 1197.6 1409.5 1660.8 1236.3 1378.1 1203.7 1855.0 1908.7 2105.8 True False 1423.3348676485605 1157.3514659673729 1367.437688176238 1754.8275632748587 1416.4985200484562 1367.1244454104774 1628.4829315846641 1374.3281611766467 1434.8454618262997 1477.5233443502777 1582.8717428766186 0.899210485027596 0.7311719797739709 0.8638967082014722 1.1086353465920982 0.8948915326987862 0.8636988129726452 1.0288154671490657 0.868249854962363 0.9064824539849928 0.933444766450321 1.0 10.628328646004386 LSPPYSS(ph)PQEFAQDVGR ddPTM_A549_PD325901_60min_R1 1 LSPPYSSPQEFAQDVGR 17 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 LS(0.001)PPYS(0.132)S(0.867)PQEFAQDVGR 76.574 0.00043083 3897400.0 2025.8 2171.1 1886.4 1892.4 2494.0 2370.8 2269.2 2315.3 2137.7 2310.2 2769.7 True False 2231.457724684862 2354.0662164761115 2014.422447844714 2009.2892500477724 2318.8300438329175 2351.4929908362337 2355.5556477538867 2269.119525182288 2047.8599030519972 2164.3335777388 2429.044458574886 0.9186566004617521 0.9691326184524577 0.8293065368702928 0.827193278803393 0.9546264316600318 0.9680732612921579 0.9697457942519031 0.9341613806910617 0.8430722195399714 0.8910226283007636 1.0 11.246173180390716 -6.807608759152327 24.999949362291616 0.9332134810396934 0.8879497781340238 0.16946482392464846 0.05396897784396237 244.21506520465633 132237.56801613487 0.009995116348988893 0.018889034820972605 1.5573679786865573e-07 6.807608759152327 -0.04526370290566961 LSPQDPRPLS(ph)PGALQLAGEK ddPTM_A549_MK2206_60min_R1 2 LSPQDPRPLSPGALQLAGEK 20 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 LS(0.027)PQDPRPLS(0.973)PGALQLAGEK;LS(0.001)PQDPRPLS(0.999)PGALQLAGEK 82.84899999999999 3.5804e-05 30962000.0 3265.8 4098.2 4074.0 3189.2 5110.0 3805.7999999999997 3830.6000000000004 3858.2 5391.2 5251.4 5242.5 True False 3816.9871988558652 4306.78087517251 4651.754460278887 3970.554143168627 4358.3257691760655 4208.527229914419 4526.570435910467 4405.111665241955 4170.10180797733 4065.105092744304 3940.642564360659 0.9686205070657414 1.0929133522850363 1.1804558226999713 1.0075905333507 1.1059936794554652 1.0679799451938423 1.1486884085476223 1.1178663360848748 1.058228890306345 1.0315843232038575 1.0 11.9442151805447 -9.70436777104992 1.0108095923947655 1.0098956722804104 1.0877259563982016 0.16897109983966863 0.057119545658935005 0.46437644525190036 0.981786976701323 0.01693060149466708 0.010904048105172693 1.9752962031555462e-10 9.70436777104992 0.07783028411779114 LSPQDPRPLS(ph)PGALQLAGEK ddPTM_A549_PD325901_60min_R1 2 LSPQDPRPLSPGALQLAGEK 20 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 LSPQDPRPLS(1)PGALQLAGEK;LSPQDPRPLS(1)PGALQLAGEK 144.26 1.846e-21 55351000.0 8720.7 8875.5 9827.6 9223.5 11860.5 10042.7 10268.4 10115.2 10836.2 11129.900000000001 12074.4 True False 9606.019044159977 9623.469533569956 10494.560034159626 9793.214646911652 11027.459396503731 9960.91558084658 10659.16958108408 9913.44440077911 10380.792197900571 10427.15621455939 10589.325345927939 0.9071417423069275 0.9087896744310159 0.9910508640850519 0.9248195070970763 1.0413750674630349 0.9406562982482156 1.0065957209618646 0.93617337053406 0.9803072300439275 0.9846856030888778 1.0 13.370323056595572 -5.6344157544958104 1.1138510368503631 0.9855669580043049 0.8835341899455681 0.3524161274381551 0.03399485453546661 0.6624031867385878 0.9859721971375033 0.00455433366109074 0.06737409971032322 2.320514280940063e-06 5.6344157544958104 -0.10203276805873684 LSPS(ph)PSSR ddPTM_A549_MK2206_60min_R1 2 LSPSPSSR 8 0 P20700;Q03252 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 1 LSPS(1)PSSR;LS(0.001)PS(0.881)PS(0.118)SR 174.48 3.6588e-06 1233540000.0 7700.200000000001 8776.3 7572.5 6362.799999999999 9354.3 7776.9 6997.200000000001 7067.4 10032.7 10658.1 9681.400000000001 True False 8999.805508184803 9222.976183391858 8646.394366829121 7921.686285636945 7978.294861566284 8599.846396111576 8268.500666776154 8069.225593004765 7760.309468929763 8250.427807628075 7277.241186953033 1.2367056796633402 1.2673726136667323 1.1881417895466715 1.0885562374707742 1.0963350886143683 1.1817454135682308 1.1362136356838488 1.1088303088636993 1.0663806887207197 1.1337301589536175 1.0 12.829175910876975 -2.000000000008841 0.10934463932077258 0.930579792905499 1.9068192964950499 0.4516417113896184 0.054743484714094806 31.23010330243485 0.2307085176380298 0.19987972775838644 4.6229735814830555 0.00999999999979643 2.000000000008841 0.9762395035895509 LSPS(ph)PSSR ddPTM_A549_PD325901_60min_R1 2 LSPSPSSR 8 0 P20700;Q03252 P20700;Q03252 LMNB1;LMNB2 Lamin-B1;Lamin-B2 1 LSPS(0.998)PS(0.002)SR;LSPS(0.999)PS(0.001)SR 133.32 0.0010655999999999999 1398190000.0 12843.900000000001 12178.3 11572.8 13183.4 12573.099999999999 11301.9 11134.7 12289.1 12080.6 12355.2 13049.5 True False 14147.803272820569 13204.60808074757 12358.19980089975 13997.708676326247 11690.008830840276 11209.861073533008 11558.437101641637 12043.984259887557 11572.894393418144 11575.090563448377 11444.494227596124 1.2362104424593927 1.153795687091814 1.0798380037713162 1.2230954376798542 1.0214526390036653 0.9794981630994801 1.0099561301512794 1.0523823963182122 1.0112193831608922 1.0114112806782973 1.0 13.482366086089872 -6.820936156487853 7.855734532031353 1.0080817133985382 1.1649792352987738 0.7769231749229328 0.041378041621411656 0.08055121830621358 9.28411589441984 0.0056435860298736625 0.010726887721367708 1.510302159995044e-07 6.820936156487853 0.15689752190023554 LSPS(ph)PTSQR ddPTM_A549_MK2206_60min_R1 3 LSPSPTSQR 9 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LSPS(0.972)PT(0.028)SQR;LS(0.002)PS(0.996)PT(0.001)SQR;LS(0.337)PS(0.506)PT(0.151)S(0.006)QR 149.23 2.4866e-05 6042831500.0 15131.0 17274.7 18320.6 16631.0 21388.5 17811.4 15846.7 16138.5 25394.7 24796.600000000002 26837.6 True False 17684.742882567232 18153.908443790584 20918.736564797582 20705.59574659395 18242.279983174623 19696.190525749556 18725.840266992735 18426.18179708342 19642.840997002877 19195.03083801338 20173.08323992094 0.876650468956105 0.8999074771012411 1.0369627843204976 1.0263971798628784 0.9042881430774345 0.9763599491213296 0.9282587120810455 0.9134043407216732 0.973715359391927 0.9515169599869557 1.0 14.300143980852754 -14.978509773864786 0.008677176538713492 1.9254157302804393 0.12306708898307953 0.012772315209258034 0.0508597311490058 18328.76505414669 12.429469551447406 1465.1437422459321 1136.2772814217542 1.0507278078069085e-15 14.978509773864786 -1.8023486412973597 LSPS(ph)PTSQR ddPTM_A549_PD325901_60min_R1 6 LSPSPTSQR 9 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LS(0.096)PS(0.651)PT(0.25)S(0.004)QR;LSPS(0.999)PT(0.001)SQR;LS(0.013)PS(0.976)PT(0.008)S(0.003)QR;LS(0.002)PS(0.974)PT(0.007)S(0.017)QR;LS(0.035)PS(0.919)PT(0.043)S(0.003)QR;LS(0.142)PS(0.735)PT(0.115)S(0.008)QR 147.19 2.8691e-05 8071179600.0 26015.899999999998 25822.999999999996 25166.2 26670.9 31881.100000000002 31550.100000000002 28469.1 29520.899999999998 31063.899999999998 31342.0 33476.7 True False 28657.015016106652 27999.19483582639 26874.129668654376 28318.30091899128 29641.881519824216 31293.166446002317 29552.50717938929 28932.082490801946 29758.39231062212 29363.060771140812 29359.278126285833 0.9760803686262833 0.953674498241776 0.9153538977715373 0.9645435012803483 1.0096256928498988 1.065869750318726 1.0065815328385221 0.9854493821800948 1.0135941416072813 1.0001288398454045 1.0 14.841528875781298 -6.676405903993875 4.233822841001685 1.0097403266778195 0.9478231228835498 0.6060273764885932 0.02312389642417413 0.11474963010092516 3.8346299922207265 0.00335619310292233 0.0071381739043590775 2.1066582866876142e-07 6.676405903993875 -0.06191720379426979 LSPS(ph)PTTEDPR ddPTM_A549_PD325901_60min_R1 1 LSPSPTTEDPR 11 0 F6RRE2;E7EV10;Q9BTC8;E7EQY4;Q9BTC8-2 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 LS(0.011)PS(0.932)PT(0.026)T(0.03)EDPR 117.94 1.6516e-05 16694000.0 4502.1 5777.5 4407.9 7580.9 5837.1 5073.9 6501.0 5646.8 7731.2 6469.4 7283.2 True False 4959.149877729149 6264.390201138014 4707.046600855977 8049.154975526926 5427.122232901813 5032.579840646183 6748.3991124837 5534.170144171095 7406.284549972215 6060.920979925292 6387.412572008741 0.7763941692856039 0.9807398740125474 0.7369254056773233 1.2601589273879632 0.8496589458906783 0.7878902112414378 1.0565153004296126 0.8664181437759679 1.159512473396259 0.9488851567981974 1.0 12.641015923895495 -8.75460267705636 24.999801616676685 1.0753253361865966 0.9205330493863212 0.1002937776188888 0.14961884433522418 189.70077021926332 693679.3647121793 0.02391652969001164 0.026828617960108124 1.7595326212409083e-09 8.75460267705636 -0.15479228680027546 LSPS(ph)WNPK ddPTM_A549_PD325901_60min_R1 1 LSPSWNPK 8 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 LS(0.001)PS(0.999)WNPK 54.982 0.021818 12646000.0 4635.1 4291.3 4794.1 5419.3 5655.3 6523.1 5310.1 5867.8 5540.0 5451.3 4957.7 True False 5105.651939819723 4652.942911318658 5119.4564552652355 5754.037852876709 5258.091237725862 6469.978036326913 5512.178761298218 5750.762125799952 5307.173065868955 5107.103987675321 4347.9343294496575 1.1742707117809608 1.0701502273857038 1.1774456712903558 1.3233957592006753 1.209330877449432 1.488057902002824 1.2677695529950483 1.3226423607294588 1.2206194168854232 1.1746046744734886 1.0 12.08611443494157 -10.252743450056846 0.829129296208532 1.0099631386846646 1.252549435206659 0.19084364624694472 0.11257667348119765 0.4277073706139663 0.5673277888755884 0.05699859145080034 0.02134303180211092 5.588001962207278e-11 10.252743450056846 0.24258629652199448 LSPSPT(ph)SQR ddPTM_A549_MK2206_60min_R1 1 LSPSPTSQR 9 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 LS(0.009)PS(0.288)PT(0.585)S(0.118)QR 75.509 0.0021904 6750100.0 2032.3 2257.8 2130.1 1993.0 2955.4 2018.7 2384.5 2075.1 3370.4 3326.2 3031.9 True False 2375.30255503545 2372.7123761564812 2432.1802100736504 2481.2850894691687 2520.664574994708 2232.31749409539 2817.7327845320588 2369.251779727225 2607.0097814228347 2574.809109853773 2278.9955538168974 1.042258529665517 1.0411219855969553 1.0672158644628318 1.0887625846015687 1.1060419011230889 0.9795181435771868 1.2363924009473717 1.0396035111868318 1.1439292968591246 1.1297999706675348 1.0 11.154182394656885 -5.850150287385354 3.8051112136072285 1.076873220639149 1.0412802030846655 0.046803229886615005 0.06777296491154293 0.6979105855706184 19.1093117937872 0.009874427481006176 0.0354972033511331 1.4120488212874467e-06 5.850150287385354 -0.03559301755448341 LSPSPT(ph)TEDPR ddPTM_A549_MK2206_60min_R1 1 LSPSPTTEDPR 11 0 F6RRE2;E7EV10;Q9BTC8;E7EQY4;Q9BTC8-2 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 LS(0.026)PS(0.263)PT(0.659)T(0.053)EDPR 108.43 0.00012761 13126000.0 2159.3 2353.1 1737.2 2382.3 2950.5 2136.7 2103.0 2015.5 3040.7 3211.1 3420.8 True False 2523.7370501835585 2472.8627390972697 1983.5610820806276 2965.9636069455096 2516.485358503716 2362.8041757733304 2485.0878783270796 2301.2032972098796 2351.9863050001227 2485.710279794194 2571.320950722925 0.9814943752836501 0.9617090929088515 0.7714171509872974 1.1534785675477934 0.9786741549304485 0.9189067491201477 0.9664635127047828 0.8949498492449564 0.914699623296292 0.9667055678503839 1.0 11.328293982393873 -8.166368262995205 0.003388410663509176 1.9064343298320037 4.389381550388114e-05 0.0008797418739512342 0.08694606323506344 58319.63038174814 129.9541205555103 36427.22621195493 36682.96917861946 6.817603455913657e-09 8.166368262995205 -1.9063904360164998 LSPSPTT(ph)EDPR ddPTM_A549_MK2206_60min_R1 1 LSPSPTTEDPR 11 0 F6RRE2;E7EV10;Q9BTC8;E7EQY4;Q9BTC8-2 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 LSPS(0.131)PT(0.358)T(0.511)EDPR 93.096 0.00030886 15691000.0 2768.3 2330.1 2504.6 2123.1 2811.4 2675.5 2108.9 2256.5 3903.4 3783.0 3138.3 True False 3235.5213615630746 2448.692137338215 2859.7899413879472 2643.259595309581 2397.846784239061 2958.6196341468376 2492.0598319562423 2576.3657852414253 3019.286132448938 2928.417672592394 2358.9734973262853 1.371580208607807 1.0380329156362371 1.2123027005726426 1.1205126290335656 1.0164788993843448 1.2541979117188917 1.056417053765462 1.0921554600598682 1.2799152410449148 1.2413949016008572 1.0 11.2039434948924 -11.111160518708646 1.4667854776296518 1.000283066782612 1.1677377535323257 0.0 0.12724438593640708 0.45952223848926244 1.7732498296119976 0.07431187071610841 0.016243829430102524 7.74175603430572e-12 11.111160518708646 0.16745468674971375 LSPSPTT(ph)EDPR ddPTM_A549_PD325901_60min_R1 1 LSPSPTTEDPR 11 0 F6RRE2;E7EV10;Q9BTC8;E7EQY4;Q9BTC8-2 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 LSPS(0.29)PT(0.29)T(0.419)EDPR 116.77 1.9736e-05 21709000.0 5203.4 5571.6 5655.9 6648.6 6795.2 5040.3 6628.9 5840.0 6561.3 5883.1 6522.1 True False 5731.6453374593775 6041.138285531901 6039.743385689628 7059.268921933844 6317.928594167379 4999.25346790614 6881.166416973267 5723.516618608627 6285.5513785353705 5511.6400619838705 5719.923046998328 1.0020493790501608 1.056157265734919 1.0559133988453102 1.2341545268932195 1.1045478308458834 0.8740071198212401 1.2030173064276328 1.0006282552371373 1.0988874023110975 0.9635864008478647 1.0 12.481780022494302 LSPVIS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LSPVISPR 8 0 Q08499-6;Q08499-7;Q08499-12 Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 LS(0.002)PVIS(0.998)PR;LSPVIS(1)PR 73.233 0.005281 31087000.0 1228.47 1234.99 1308.06 1381.1 1732.22 1412.87 1037.41 1329.9299999999998 1988.95 1828.51 1511.9299999999998 True False 1435.8057027921077 1297.8457159312136 1493.5625771508098 1719.4695619999352 1477.4127326579583 1562.378965612797 1225.8939685474538 1518.4516502398083 1538.4560007004955 1415.4483210446526 1136.4760538548044 1.2633840351690733 1.1419912558025844 1.3142050570135697 1.5129835390439417 1.2999945996633482 1.3747574885659717 1.0786799813241585 1.3361052748004534 1.353707361877286 1.2454713112903737 1.0 10.150351570798595 -10.803436978399356 0.8741142996932257 0.9851996382170091 1.300216125169365 0.11467586083750958 0.1301810755282077 0.4545439975653872 0.5681323860487679 0.09758143463201681 0.02022225537175462 1.5723999509504635e-11 10.803436978399356 0.31501648695235585 LSPVIS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LSPVISPR 8 0 Q08499-6;Q08499-7;Q08499-12 Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 LSPVIS(1)PR;LSPVIS(1)PR 78.816 0.0042103999999999996 37676000.0 2184.3 2119.62 1872.94 2176.5 2708.5 2485.2 2269.9 2501.4 2709.2 2979.3 2566.7 True False 2406.0485280033286 2298.247816207038 2000.0489713031575 2310.937461809857 2518.2643038177457 2464.961355165435 2356.2822866369397 2451.507614689662 2595.3417454967826 2791.1864895494814 2251.01217165186 1.0688740639894887 1.0209841799835826 0.8885109536460043 1.0266214865084544 1.11872531634059 1.0950457692801245 1.0467656800397616 1.0890690177346631 1.1529665535270042 1.2399695233550092 1.0 11.136358142402313 -6.528825865038184 22.386025347400324 1.0773785908506086 0.9892687020392672 0.281674980558942 0.07306740605638297 43.567096802708164 163994.38455793523 0.009609849146109238 0.020070540020421686 2.9591987507187523e-07 6.528825865038184 -0.08810988881134141 LSPVIS(ph)PRNS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LSPVISPRNSPR 12 1 Q08499-6;Q08499-7;Q08499-12 Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 2 LS(0.018)PVIS(0.982)PRNS(1)PR;LS(0.009)PVIS(0.991)PRNS(1)PR 71.692 0.00068455 11166500.0 1346.78 1425.25 1600.62 1271.1100000000001 1692.1 1363.9699999999998 1141.71 1520.87 1751.6100000000001 1644.8000000000002 1950.9699999999998 True False 1483.504114152966 1545.36081941531 1709.2476985099695 1349.6235777997372 1573.2527334280978 1352.8622805428126 1185.1583988176847 1490.5350547505661 1677.995923087856 1540.9470472966755 1711.0130582178006 0.8670326079791529 0.9031847021816217 0.9989682371508783 0.7887862522834932 0.9194861055396067 0.79067910910742 0.6926647304797027 0.8711418347111357 0.9807031658984909 0.9006050771475311 1.0 10.740635054982794 -8.750716739700202 4.735457125740353 0.9914682819563595 0.8521948244067764 0.2392941863790483 0.08009026808328396 0.14272772230551625 8.066343067851564 0.013490011195029142 0.014851706923652343 1.7753470396264584e-09 8.750716739700202 -0.1392734575495831 LSPYPSS(ph)PMR ddPTM_A549_PD325901_60min_R1 2 LSPYPSSPMR 10 0 A0A0A0MRE6;O94967-2;O94967;O94967-3;O94967-4 A0A0A0MRE6 WDR47 WD repeat-containing protein 47 1 LSPYPS(0.003)S(0.997)PMR;LSPYPS(0.002)S(0.998)PMR 110.53 0.00018444 8764300.0 4356.200000000001 4820.6 4536.2 4420.8 5412.8 5321.7 4505.0 4666.1 4908.4 5589.7 5283.0 True False 4798.4382171350535 5226.848879897174 4844.053810386551 4693.862775634741 5032.623601146272 5278.361839604013 4676.440240230592 4573.0309750153665 4702.117017420793 5236.765388055828 4633.2244916962545 1.0356584762372076 1.128123381300609 1.0455037995823748 1.0130877068545165 1.0862032716450127 1.139241547450158 1.0093273590804395 0.9870082883338013 1.0148692397374677 1.13026368513791 1.0 12.177800871028639 -7.951298175650054 24.82013557656722 1.0053572941717785 1.073539341619376 0.09916850829511248 0.05168910058909239 70.067406290576 35708.56466496432 0.005419613243316779 0.007488270433459002 1.1186695694011861e-08 7.951298175650054 0.06818204744759737 LSQS(ph)IPFTPVPPR ddPTM_A549_MK2206_60min_R1 2 LSQSIPFTPVPPR 13 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 LS(0.001)QS(0.961)IPFT(0.038)PVPPR;LS(0.005)QS(0.962)IPFT(0.033)PVPPR 87.49799999999999 0.00019388 3550700.0 2267.88 2981.95 2367.99 2386.62 3623.1 2594.8 2916.2 2318.74 4273.8 3957.1 3943.8 True False 2650.64269965743 3133.7185180617494 2703.8065891987726 2971.3420071394444 3090.146789491547 2869.380013711162 3446.0357920957817 2647.428495843431 3305.7911238561937 3063.1883616746936 2964.445616657236 0.8941444851487423 1.0571010311180506 0.9120783238545747 1.0023263676835419 1.0424029275922606 0.9679314059897407 1.16245539224349 0.8930602339160874 1.1151464898802446 1.0333090087612409 1.0 11.533546615105918 -6.746115211942857 1.0341068823801671 1.0473429555346085 0.9592315391556993 0.12832755040650912 0.07793205844984825 0.7475564421468641 1.5268977922524947 0.01227987333906128 0.04029980203715193 1.7942575735278057e-07 6.746115211942857 -0.08811141637890929 LSQS(ph)IPFTPVPPR ddPTM_A549_PD325901_60min_R1 1 LSQSIPFTPVPPR 13 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 LS(0.002)QS(0.703)IPFT(0.295)PVPPR 101.62 0.00014092 2913400.0 3585.2 3876.0 3944.9 3937.5 4634.0 4909.8 3954.7 4016.7 4078.5 4223.0 4824.3 True False 3949.1668647152565 4202.644122823181 4212.624636610801 4180.710432288679 4308.523826432129 4869.816216639 4105.198272594876 3936.5837674598083 3907.0948283658 3956.359059298312 4230.941683757381 0.9334013938022686 0.9933117582209099 0.9956706925985533 0.9881276426802241 1.0183368499198622 1.1510005527455658 0.970280041522379 0.9304273284059634 0.9234574996306776 0.9351012977765225 1.0 12.04676308542753 -7.9747507859043125 24.99683048064383 0.9598624404365739 1.0148447397521483 0.24439919147917066 0.05321023390085261 307.60986115737495 304534.39328427124 0.008951104278876 0.012367464521966754 1.0598617382322381e-08 7.9747507859043125 0.05498229931557441 LSQS(ph)SQDSS(ph)PVR ddPTM_A549_MK2206_60min_R1 1 LSQSSQDSSPVR 12 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 2 LS(0.069)QS(0.484)S(0.434)QDS(0.469)S(0.545)PVR 50.102 0.034306 3115400.0 1020.8 1056.5 1024.6 800.41 1061.2 1181.6 996.07 883.09 1433.0 1442.5 1643.7 True False 1193.0860838361402 1110.2713373236443 1169.9036867947336 996.5104859317703 905.0988857631401 1306.6361277173999 1177.043025661081 1008.2707118497009 1108.4277880307752 1116.6382481402409 1235.5239261878144 0.9656519461483718 0.8986239066606871 0.9468887344047228 0.8065489180824563 0.7325628153198178 1.0575563127692726 0.9526671242157364 0.8160673302059808 0.8971317872012468 0.9037771138804305 1.0 10.27090723370052 -7.275416825356757 24.992659323946015 0.9457495557343596 0.8723827960533134 0.13891681373600684 0.08271372991826863 1226.1476191742877 2192434.4616687447 0.013182141684154053 0.021133031560631652 5.303751585998817e-08 7.275416825356757 -0.07336675968104622 LSQSIPFT(ph)PVPPR ddPTM_A549_PD325901_60min_R1 1 LSQSIPFTPVPPR 13 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 LSQS(0.392)IPFT(0.607)PVPPR 122.42 7.8764e-06 2618400.0 1742.3 2090.8 1857.4 2275.8 2453.1 2299.2 2279.8 1905.7 2179.7 2218.3 2267.3 True False 1919.1770133865305 2266.9990536632376 1983.4543334535472 2416.370997283194 2280.8027187355765 2280.4760774973306 2366.55903655443 1867.6893185072704 2088.0947891109304 2078.236159422553 1988.4364735988868 0.9651688846327572 1.1400912645502717 0.9974944433923392 1.215211564144056 1.1470332339094211 1.1468689635177929 1.1901607458804937 0.939275326773163 1.0501189335617402 1.0451609528471066 1.0 10.957418756441703 -8.25934767689562 24.999705222250185 1.0179991701983009 1.1174148742498158 0.30902127839358673 0.0756581899924399 179.17735001515592 2141499.00434452 0.011721898950492027 0.014761021718793213 5.5036692065542066e-09 8.25934767689562 0.0994157040515149 LSQSS(ph)QDS(ph)SPVR ddPTM_A549_PD325901_60min_R1 1 LSQSSQDSSPVR 12 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 2 LS(0.305)QS(0.276)S(0.462)QDS(0.694)S(0.263)PVR 65.563 0.0067001000000000005 3255200.0 1144.0 1142.2 1059.6 1241.4 1118.4 1182.8 1157.7 1005.3 1157.2 1034.6 1294.8 True False 1260.1380378317112 1238.4572025512489 1131.5108278924188 1318.0784585760423 1039.8474422705428 1173.1676689560895 1201.7569070177474 985.2485028574066 1108.5669082713994 969.2751794340595 1135.5478084134604 1.1097181717010427 1.090625329356735 0.9964449048370038 1.1607423736897577 0.915723173050172 1.0331292617218732 1.0583058662204559 0.8676415872211971 0.9762397497118527 0.85357496377743 1.0 10.149172731798085 -6.764911326743415 24.999999862798433 0.9837652309381133 1.0828330373008914 0.4044470971111076 0.07242147997888429 68.77242685844186 495206.46482305863 0.008276517645764642 0.01610263380767675 1.7182591815841002e-07 6.764911326743415 0.09906780636277812 LSQSSQDS(ph)SPVR ddPTM_A549_PD325901_60min_R1 2 LSQSSQDSSPVR 12 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 LSQSS(0.002)QDS(0.683)S(0.315)PVR;LSQS(0.001)S(0.002)QDS(0.499)S(0.499)PVR 104.81 0.00017281 224746600.0 4523.9400000000005 4951.3099999999995 4517.75 5434.93 5658.929999999999 5478.2699999999995 4888.35 5959.16 5192.1 5531.43 5383.799999999999 True False 4983.20705845139 5368.574270323957 4824.35168243769 5770.633282478403 5261.466279048678 5433.6567854346295 5074.378834257763 5840.299878929415 4973.894093014118 5182.174565800252 4721.626730720103 1.0554004673917528 1.1370179339664122 1.0217562627408119 1.2221705805190395 1.1143333810816178 1.150801851845229 1.074709866674247 1.2369253674651874 1.053428061276572 1.097540077042454 1.0 12.205068278150577 -8.972864961342175 14.179775025277563 1.023556832807145 1.1265808540044764 0.19612507921251354 0.06531938026698053 1.1793973616771722 615.8355403246434 0.010168479762865537 0.01059872814611639 1.0644739521739373e-09 8.972864961342175 0.10302402119733145 LSQSSQDS(ph)SPVRNLQSFGTEEPAYSTR ddPTM_A549_MK2206_60min_R1 1 LSQSSQDSSPVRNLQSFGTEEPAYSTR 27 1 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 LSQS(0.001)S(0.008)QDS(0.495)S(0.495)PVRNLQSFGTEEPAYSTR 123.52 2.2199e-18 16187000.0 1632.5 1857.2 1932.4 1516.8 2152.5 1571.3 1392.4 1438.2 2295.8 2572.8 3339.0 True False 1908.0260892069932 1951.7235472574273 2206.4433772810307 1888.4160680917391 1835.870101399509 1737.5739230554743 1645.3810564824653 1642.0692543027783 1775.8049656392557 1991.6026931127976 2509.834148288077 0.7602199892404968 0.7776304854998769 0.8791191954998362 0.7524067155512254 0.7314706840895167 0.6923062722055358 0.6555736193185342 0.6542540890292735 0.7075387697830582 0.7935196413162369 1.0 11.293376317623862 -10.654557714843511 0.9284297763997097 0.9997057257472353 0.7348447202079526 0.25371768081228807 0.08373193137600632 0.2658376489057966 0.40882883492681305 0.04649331394075092 0.012486662921387604 2.2153496715363663e-11 10.654557714843511 -0.2648610055392827 LSQSSQDS(ph)SPVRNLQSFGTEEPAYSTR ddPTM_A549_PD325901_60min_R1 2 LSQSSQDSSPVRNLQSFGTEEPAYSTR 27 1 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 LSQSS(0.001)QDS(0.5)S(0.5)PVRNLQSFGTEEPAYSTR;LSQS(0.004)S(0.023)QDS(0.487)S(0.487)PVRNLQSFGTEEPAYSTR 196.85 6.441799999999999e-69 66473000.0 5444.0 5132.5 5948.700000000001 6630.6 7019.2 9407.2 6882.0 7190.2 7233.3 7562.2 7962.5 True False 5996.670872339017 5565.033787510316 6352.414554439062 7040.15710281481 6526.195606925425 9330.590882147224 7143.898275974904 7046.785820397219 6929.309555478324 7084.721401426876 6983.162978446232 0.8587327677798647 0.7969216535095888 0.9096758265625482 1.0081616488895493 0.9345615485516732 1.3361553941883366 1.0230175492144158 1.0091108917473874 0.9922881045259679 1.014543327041644 1.0 12.7696649285073 -6.108283640905284 2.220342951369866 1.0207770265460587 0.8261825602087294 0.4054628900977174 0.10035878016476699 0.258721248746308 2.4486169319935986 0.014336984863693754 0.05106436427113564 7.793209640512514e-07 6.108283640905284 -0.19459446633732935 LSQSSQDSS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 LSQSSQDSSPVR 12 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 LSQSSQDS(0.064)S(0.936)PVR;LSQSSQDS(0.001)S(0.999)PVR 162.96 3.6707999999999996e-14 327760000.0 7628.1 9721.7 8843.1 8625.3 10891.2 8333.3 7909.4 9269.0 11530.2 12199.4 12332.8 True False 8915.536790860557 10216.493005261971 10097.184552698136 10738.498887204434 9289.118907485397 9215.124274803151 9346.435599068092 10582.909135121987 8918.628109945874 9443.54706714873 9270.225392035687 0.9617389452601818 1.1020760092887547 1.089205938981043 1.158385954286525 1.002038085877172 0.9940561189289017 1.0082209659214845 1.1416021388448725 0.9620724127816913 1.018696597739894 1.0 13.178388700969103 -8.804949357281833 24.999882226878555 0.9820897256314142 1.057532062997134 0.1703728278396326 0.0610550723080195 139.98087555034797 80429.3446870845 0.010442230142491758 0.011116631056186004 1.5669337782992897e-09 8.804949357281833 0.07544233736571992 LSQSSQDSS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 LSQSSQDSSPVR 12 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 LSQSSQDS(0.104)S(0.896)PVR 157.43 8.003999999999999e-14 239620000.0 6229.0 6527.3 6079.1 6236.1 6793.4 6837.0 6359.6 6863.9 6903.9 6861.2 6746.0 True False 6861.36349445256 7077.37847856134 6491.664282597961 6621.289733789316 6316.25501995771 6781.321738800123 6601.61805810665 6726.994129874621 6613.753091958971 6427.982661060279 5916.284766417363 1.1597419267915825 1.1962538582886846 1.0972535195477113 1.1191634607201086 1.0676049698977812 1.1462128694840676 1.1158384558463865 1.1370301456851928 1.1178895798763187 1.0864897338186743 1.0 12.5304757794944 -14.99999999968958 0.19953639075466895 0.3858071142955442 1.1495753871657493 0.2946435499106922 0.04133630636763481 19.247296277445326 0.22620721166858782 4.5940051671694615 0.027992543517912506 1.0000000007147688e-15 14.99999999968958 0.7637682728702051 LSQSSQDSS(ph)PVRNLQSFGTEEPAYSTR ddPTM_A549_MK2206_60min_R1 1 LSQSSQDSSPVRNLQSFGTEEPAYSTR 27 1 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 LSQSSQDS(0.381)S(0.619)PVRNLQSFGTEEPAYSTR 194.99 7.539899999999999e-69 17254000.0 1800.8 2417.4 2568.1 2173.9 2784.4 2491.1 1759.9 1835.1 4322.3 3283.1 3393.2 True False 2104.7310146670475 2540.4353344497645 2932.2951962302914 2706.50559759008 2374.818448472375 2754.7065485416506 2079.6510494854138 2095.2310447580503 3343.305951294777 2541.4454297880225 2550.574792444174 0.8251987045830239 0.9960246380445511 1.1496605411913137 1.0611355548591774 0.9310914761282596 1.0800336287734815 0.8153656405788118 0.8214740657537138 1.310804906093713 0.9964206645956055 1.0 11.316606691260983 -8.758222840109203 24.999988832727865 1.1467689787588455 0.9691088205121094 0.1635326869415087 0.13236955825510555 93.45395547747596 726353.3087600076 0.025937019660250506 0.02881279720545176 1.7449265868406695e-09 8.758222840109203 -0.1776601582467361 LSQVSDSVSGQT(ph)VVDPK ddPTM_A549_MK2206_60min_R1 2 LSQVSDSVSGQTVVDPK 17 0 O94906-2;O94906 O94906-2 PRPF6 Pre-mRNA-processing factor 6 1 LSQVSDSVSGQT(1)VVDPK;LSQVSDSVS(0.001)GQT(0.999)VVDPK 242.42 3.9118999999999995e-74 50816000.0 5025.4 6163.1 5370.2 4645.0 7601.0 6039.9 5070.4 6398.2 8792.7 8593.0 8333.9 True False 5873.564660766201 6476.775465271512 6131.775111092207 5783.025208521973 6482.902968983812 6679.03820903886 5991.626047679327 7305.164443665716 6801.167489056662 6651.83533190231 6264.362626061095 0.9376156859647475 1.0339081327008008 0.9788346360382626 0.9231625871183358 1.0348862854799532 1.0661959735939655 0.9564621982055883 1.1661464828480173 1.085691856464749 1.0618534923615763 1.0 12.612952013203822 -6.912729188303378 8.335670272872909 1.0466461381054106 0.9739725749712531 0.3440463865289838 0.05580079860946709 0.28459037913908825 24.18855381347198 0.008485046424441471 0.016073814005927684 1.222561771672901e-07 6.912729188303378 -0.07267356313415752 LSQVSDSVSGQT(ph)VVDPK ddPTM_A549_PD325901_60min_R1 2 LSQVSDSVSGQTVVDPK 17 0 O94906-2;O94906 O94906-2 PRPF6 Pre-mRNA-processing factor 6 1 LSQVSDSVSGQT(1)VVDPK;LSQVSDSVS(0.002)GQT(0.998)VVDPK 227.26 1.1750999999999998e-63 86069000.0 16252.8 19364.5 22166.4 20232.5 23285.0 19594.2 22759.4 22396.0 23890.2 22560.9 22036.6 True False 17902.772291321024 20996.414374718664 23670.74520139156 21482.215573658603 21649.54192888912 19434.631331636305 23625.521421421567 21949.294210677872 22886.1779744084 21136.400923732708 19326.237901516895 0.9263454368382713 1.0864201549061279 1.2247983969779068 1.1115570284878096 1.120215017491318 1.0056086151206336 1.2224583771457778 1.1357251381529923 1.1842024345882698 1.0936634968191992 1.0 14.238273205455423 -3.7091161363028067 16.88431730201908 1.0988500884122676 0.9481928286459128 0.0 0.08985304942497216 0.0 0.0 0.012715302702133476 0.0 0.00019538169084634425 3.7091161363028067 -0.1506572597663548 LSRGDS(ph)LKEPTSIAESSR ddPTM_A549_MK2206_60min_R1 8 LSRGDSLKEPTSIAESSR 18 2 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 LS(0.112)RGDS(0.888)LKEPTSIAESSR;LS(0.01)RGDS(0.987)LKEPT(0.002)S(0.002)IAESSR;LS(0.003)RGDS(0.997)LKEPTSIAESSR;LS(0.001)RGDS(0.999)LKEPTSIAESSR;LS(0.002)RGDS(0.997)LKEPTSIAESSR;LS(0.097)RGDS(0.903)LKEPTSIAESSR;LS(0.08)RGDS(0.92)LKEPTSIAESSR;LS(0.343)RGDS(0.657)LKEPTSIAESSR 186.69 1.6932999999999999e-40 464619000.0 48246.9 43371.5 36460.4 32592.400000000005 44379.299999999996 35051.5 30608.300000000003 29430.000000000004 52825.200000000004 61534.99999999999 79051.29999999999 True False 56389.79719654568 45578.9240953454 41631.03297092593 40577.53946312842 37851.16375890322 38760.62646469737 36169.43190974737 33601.79262559501 40860.37654451032 47634.20076208645 59420.6805051108 0.9489927869758336 0.7670548992017204 0.7006152170765736 0.6828858087486617 0.6370032022041151 0.652308693458392 0.6087010717865545 0.5654898654805022 0.6876457185810233 0.8016434742444495 1.0 15.8586775070339 -10.50624554400165 0.8807479037668695 0.9951896988212077 0.6892898957671919 0.2890581144976808 0.11042233132047603 0.33244322650831026 0.4733803630178891 0.06231947183580184 0.01896238519341947 3.1171267061191146e-11 10.50624554400165 -0.30589980305401576 LSRGDS(ph)LKEPTSIAESSR ddPTM_A549_PD325901_60min_R1 4 LSRGDSLKEPTSIAESSR 18 2 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 LS(0.001)RGDS(0.999)LKEPTSIAESSR;LS(0.001)RGDS(0.999)LKEPTSIAESSR;LS(0.001)RGDS(0.997)LKEPT(0.001)S(0.001)IAESSR;LS(0.035)RGDS(0.965)LKEPTSIAESSR 192.16 4.8131e-41 875500000.0 23240.500000000004 22189.9 25970.5 25022.5 28929.6 29036.5 27484.4 28208.8 25259.4 29147.9 32111.8 True False 25599.858451248165 24059.920748460812 27733.014303303175 26568.082994779288 26897.684697701974 28800.036371020902 28530.333882040763 27646.153354624486 24197.835259929645 27307.49661958826 28162.252173471854 0.9090131816716917 0.8543322671872339 0.9847583968950817 0.9433934058656632 0.9550970757601173 1.02264677532253 1.013070038088631 0.9816740928364558 0.8592294078924344 0.9696488921191909 1.0 14.781475092415787 -5.758431848972327 24.99276887087988 0.9513988349145945 0.8816727209175628 0.28969969901654713 0.04638982386482825 103.91361437302123 863480.5445609328 0.00846443179727168 0.03015372511172423 1.744087024303498e-06 5.758431848972327 -0.06972611399703177 LSRS(ph)ERNRR ddPTM_A549_MK2206_60min_R1 1 LSRSERNRR 9 3 Q6ZVN8-3;Q6ZVN8-2;Q6ZVN8 Q6ZVN8-3 HFE2 Hemojuvelin 1 LS(0.067)RS(0.933)ERNRR 47.938 0.021962 2674800.0 1357.6 1295.6 1383.6 1227.8 1587.2 1420.5 1038.3 1366.3 2266.9 2013.3 1865.0 True False 1586.729689866716 1361.5405060449723 1579.8152850372767 1528.6110551180357 1353.7249825511265 1570.8163671484133 1226.9456700271078 1559.9772091182629 1753.4507694954386 1558.4941317024231 1401.8690286185272 1.1318672839433224 0.9712323178911395 1.1269350080400213 1.0904093206370402 0.9656572439475004 1.1205157793494984 0.8752213259438382 1.1127838459028827 1.2507949984624298 1.1117259172479488 1.0 10.453135854703346 -8.486432598565298 24.998719610997522 1.121765669634911 1.0395810624589512 0.14352870812506047 0.09244558407027643 1022.2643298606561 701181.1163783835 0.018273266742920208 0.022087297398729368 3.262626816304323e-09 8.486432598565298 -0.08218460717595977 LSRS(ph)PLK ddPTM_A549_MK2206_60min_R1 1 LSRSPLK 7 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 LS(0.052)RS(0.948)PLK 44.446999999999996 0.022288 5091800.0 889.25 1008.7 1168.8 989.29 1332.1 809.24 890.94 983.0 1260.7 1524.0 1635.8 True False 1039.33365992485 1060.038521493951 1334.5534151138834 1231.666094410916 1136.1498546221999 894.8732396699629 1052.8122654858435 1122.3432603112437 975.1534629242127 1179.7273415360316 1229.5857142167215 0.8452714177693037 0.8621103101943759 1.0853683477967448 1.0016919358855105 0.9240102918290306 0.7277843499019674 0.8562333258373228 0.9127816363954797 0.7930748150773784 0.9594510800636205 1.0 10.263956593134234 -5.544504966039817 24.98849054546174 0.9059505761896071 0.8494806687255926 0.052697005166860045 0.09554210108956068 616.2234541526768 712028.616215104 0.015055268647895059 0.05831727614838046 2.8542698757967315e-06 5.544504966039817 -0.05646990746401448 LSRS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 LSRSPLK 7 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 LS(0.06)RS(0.94)PLK;LS(0.043)RS(0.957)PLK 49.418 0.015243000000000001 16458400.0 2988.2 2979.1 2849.0 2719.9 3199.3999999999996 2566.5 3138.1 2737.0 2821.1000000000004 3131.4 3137.6000000000004 True False 3291.5598642034274 3230.1592121523586 3042.3502724287473 2887.9020456589174 2974.6851813308067 2545.599274920363 3257.5221127342083 2682.4083878650376 2702.538977639514 2933.6828695919316 2751.695090885135 1.1961935299832347 1.173879774271544 1.105627684733819 1.0494992905372988 1.0810373544599168 0.9251022336568266 1.1838237904790405 0.9748203559145756 0.9821360610016537 1.0661366076894285 1.0 11.426104901781061 -3.984214615347566 0.33743409199843827 0.9897788422836094 1.689812474194173 0.42882384841472887 0.0660750788445372 7.218888022947416 0.29244726125503195 0.016625673061552874 2.4771601795025058 0.00010370158269604555 3.984214615347566 0.7000336319105636 LSS(ph)AGPR ddPTM_A549_PD325901_60min_R1 2 LSSAGPR 7 0 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LS(0.201)S(0.799)AGPR;LS(0.121)S(0.879)AGPR 101.72 0.010864 29469000.0 9375.5 10071.3 10271.1 10744.7 11747.7 9715.6 10365.0 10323.0 11580.8 12825.0 13331.400000000001 True False 10327.293858121684 10920.043796230422 10968.158611141773 11408.375716015798 10922.582079364855 9636.479374796909 10759.445746945627 10117.099666763168 11094.09924931682 12015.227311271807 11691.72231470745 0.8832996183231789 0.933997874931882 0.9381131638188602 0.9757651960023701 0.934214975805997 0.8242138425298405 0.9202618277557724 0.8653215834622153 0.948884941901258 1.0276695757781904 1.0 13.513199849355841 -9.471360230896646 1.2406362559590125 0.987890109322371 0.9125614192554558 0.4452992531169021 0.041768705322341726 0.3039733334658035 0.9673237169139445 0.01051433409699663 0.008186010722708519 3.377845404353332e-10 9.471360230896646 -0.07532869006691523 LSS(ph)ATANALYSSNLRDDTK ddPTM_A549_MK2206_60min_R1 2 LSSATANALYSSNLRDDTK 19 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LS(0.108)S(0.891)AT(0.001)ANALYSSNLRDDTK;LS(0.021)S(0.975)AT(0.003)ANALYSSNLRDDTK 194.97 6.1359999999999994e-55 29097000.0 10639.5 9844.5 9610.1 8832.099999999999 11117.9 8436.3 8400.4 7590.6 13110.3 13224.3 13206.599999999999 True False 12435.187489199274 10345.543000740767 10972.956685990703 10995.964896488036 9482.471637793067 9329.023666437282 9926.643943461144 8666.590795237562 10140.83798284708 10236.921445324766 9927.036736382535 1.2526585545537854 1.0421582266160463 1.1053607413151678 1.1076784732938365 0.9552167368374754 0.9397591561484266 0.9999604320068695 0.8730289839136541 1.021537267579656 1.0312162347306024 1.0 13.277147415937577 -2.000000063983687 0.5945352431914264 0.9940745812511063 15.749066108245286 0.6189386163245967 0.05935236959773927 77.74087475615946 0.5603621004524714 0.010107021891940432 1492.7708194366367 0.009999998526721274 2.000000063983687 14.754991526994178 LSS(ph)ATANALYSSNLRDDTK ddPTM_A549_PD325901_60min_R1 1 LSSATANALYSSNLRDDTK 19 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 LS(0.034)S(0.964)AT(0.001)ANALYSSNLRDDTK 146.25 2.7027e-21 10479000.0 2833.7 3223.8 3260.7 3404.0 4007.5 3718.1 3719.1 3625.5 4813.6 7015.3 6875.7 True False 3121.375137940316 3495.480939927082 3481.9907101819626 3614.2573489550914 3726.027025124465 3687.8210263321275 3860.632385669609 3553.186558350269 4611.301131744912 6572.352760761414 6030.032488653404 0.5176381957831484 0.579678624701353 0.5774414510591706 0.5993760988445701 0.6179116003331091 0.611575647937458 0.6402340937522454 0.5892483274403963 0.7647224356455639 1.0899365423202088 1.0 12.557950059771342 -9.588377246519393 0.43842797428009983 1.024145651269037 0.5605353046129883 0.931879969869095 0.046447297582122786 0.1525265577745311 0.06541626907305438 0.02852088524251816 0.012943970881715677 2.580018104357175e-10 9.588377246519393 -0.4636103466560487 down LSS(ph)DSFAR ddPTM_A549_MK2206_60min_R1 2 LSSDSFAR 8 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LS(0.285)S(0.679)DS(0.037)FAR;LS(0.188)S(0.809)DS(0.003)FAR 143.37 0.00096457 57048000.0 2173.23 2435.0299999999997 2122.92 2077.14 2709.0 2385.06 2166.7200000000003 2222.48 2614.37 2933.3 2828.4 True False 2540.018093627756 2558.9626261459475 2423.9819781088013 2586.039393246357 2310.509688590599 2637.4454661253058 2560.3849775220415 2537.523346059545 2022.219369291009 2270.6654927346744 2126.0302201311756 1.1947234190636469 1.203634173171847 1.140144648536201 1.2163700067663192 1.0867717997197806 1.2405493774978307 1.20430319064988 1.1935499890979822 0.9511715074145269 1.068030675779658 1.0 11.053946388644707 -8.75865030244406 24.999771359684097 0.9769420935470422 1.1843971171066199 0.7195274496545214 0.04872369590543778 18.36250125840966 164591.18123353348 0.006812780503867478 0.007558072829591557 1.7432099556923056e-09 8.75865030244406 0.20745502355957768 LSS(ph)EDEEEDEAEDDQSEASGKK ddPTM_A549_MK2206_60min_R1 2 LSSEDEEEDEAEDDQSEASGKK 22 1 Q8NEJ9-2;Q8NEJ9;G3V4G1 Q8NEJ9-2 NGDN Neuroguidin 1 LS(0.02)S(0.98)EDEEEDEAEDDQSEASGKK;LS(0.1)S(0.9)EDEEEDEAEDDQSEASGKK 375.79 4.507499999999998e-296 105122000.0 8251.4 9747.8 9683.599999999999 8217.2 13206.7 8731.6 8915.2 8040.3 13062.9 15217.0 13680.9 True False 9644.034592638645 10243.92138377985 11056.880091201921 10230.414368884127 11264.011924809698 9655.572116433003 10534.97643978201 9180.037147386056 10104.174007164836 11779.469131334521 10283.554956368474 0.9378113535209162 0.9961459268942712 1.0752001752423694 0.9948324691500346 1.0953422209149608 0.9389332927572318 1.0244488880042242 0.892691018459621 0.9825565235013841 1.1454666388532933 1.0 13.328051460359394 -7.303268026653077 24.9999452875505 0.9827370266313014 1.0202321173985114 0.0018248564449909743 0.07085670201158505 824.7844237767284 492951.235550398 0.007323038702548776 0.011706730753560435 4.9742999922781437e-08 7.303268026653077 0.037495090767210026 LSS(ph)EDEEEDEAEDDQSEASGKK ddPTM_A549_PD325901_60min_R1 2 LSSEDEEEDEAEDDQSEASGKK 22 1 Q8NEJ9-2;Q8NEJ9;G3V4G1 Q8NEJ9-2 NGDN Neuroguidin 1 LS(0.024)S(0.976)EDEEEDEAEDDQSEASGKK;LS(0.016)S(0.984)EDEEEDEAEDDQSEASGKK 399.96 0.0 182628000.0 21372.5 22317.5 22232.6 23777.5 26445.4 24198.0 24727.4 26628.5 24152.8 26103.8 26550.0 True False 23542.22046639708 24198.274048273073 23741.437931484514 25246.182172379453 24587.966335677233 24000.93951082133 25668.414738352472 26097.373677845873 23137.741809624506 24455.601613097613 23284.518314316785 1.0110675320228482 1.0392430593419 1.019623322715969 1.0842475601849368 1.0559791705271826 1.0307681347251252 1.1023811784231723 1.120803674164888 0.9936963907644148 1.050294503969222 1.0 14.507083417055153 -8.850996655474631 24.999997212174662 0.9970227312863655 1.0574929462479994 0.18185792466669137 0.03597460000093883 13.921583657307703 3882.3553594903015 0.005719373638319054 0.006088718649198643 1.4092996514731652e-09 8.850996655474631 0.06047021496163385 LSS(ph)FSSR ddPTM_A549_MK2206_60min_R1 2 LSSFSSR 7 0 Q9ULH1;Q9ULH1-2;E5RHA9 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 LS(0.147)S(0.852)FSSR;LS(0.33)S(0.666)FS(0.004)SR 86.13600000000001 0.013288 9968100.0 3117.6000000000004 4086.7999999999997 3492.8 2586.7 5981.9 3881.2 3349.4 4137.0 5390.700000000001 5267.6 5933.9 True False 3643.7746619979916 4294.800663865846 3988.1315608399814 3220.4416161213767 5101.97043417501 4291.90600786795 3957.942624664157 4723.432419031146 4169.715057178992 4077.6455014929156 4460.348862691409 0.8169259343089388 0.9628844729589897 0.894129962388976 0.7220156349335728 1.1438500868957686 0.9622354977135537 0.8873616720365465 1.0589827308218647 0.9348405664087346 0.9141987828800533 1.0 12.12294083848292 -6.753432577368958 24.999991488351945 0.9787115416323731 0.86034879680663 0.36488505756168377 0.08610070345945148 165.5076784041358 516767.55461508146 0.011438541447018374 0.02348061424453956 1.7642796411828323e-07 6.753432577368958 -0.11836274482574305 LSS(ph)FSSR ddPTM_A549_PD325901_60min_R1 1 LSSFSSR 7 0 Q9ULH1;Q9ULH1-2;E5RHA9 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 LS(0.05)S(0.928)FS(0.022)SR 100.98 0.011073000000000001 8527200.0 2508.5 2397.8 2741.8 2803.9 3023.6 2832.5 2985.1 2751.6 3058.8 2988.0 3483.8 True False 2763.161073339902 2599.871021079833 2927.875035782781 2977.0905348810766 2811.2327668537305 2809.433059112383 3098.6996140093984 2696.717179411559 2930.24927326353 2799.337170064731 3055.3146856277544 0.9043785526701562 0.8509339588847149 0.9582891901628166 0.9743973505856384 0.920112347208558 0.9195233055135034 1.0141998232083023 0.8826315639750486 0.9590662745960231 0.9162189358866549 1.0 11.577105264383313 -6.609683321619633 0.01263884658931469 1.853264268710071 3.181210051513803e-07 0.0 0.04740136183475791 1438.3509358041465 4.339913471276824 299.8748799546835 336.95407771852234 2.4564994904212835e-07 6.609683321619633 -1.853263950589066 LSS(ph)LPR ddPTM_A549_MK2206_60min_R1 2 LSSLPR 6 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ES05 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 LS(0.023)S(0.977)LPR;LS(0.036)S(0.964)LPR 82.671 0.041544 124677000.0 7972.7 7480.2 7277.799999999999 6944.4 8112.8 5824.6 6137.1 5399.6 8726.7 8369.2 8801.3 True False 9318.296846199448 7860.910229482554 8309.901475458431 8645.778311745964 6919.417866961173 6440.955305943435 7252.131630090876 6165.009835581474 6750.116383676319 6478.591907338162 6615.694306477338 1.4085138179791694 1.18822150258455 1.2560890951872306 1.3068587983699607 1.0459095518041792 0.9735872015182415 1.0962011384036308 0.931876466774681 1.0203186651274636 0.9792761888944989 1.0 12.691676857635867 -6.8121311654939705 5.244682255540091 1.008661361877792 1.2806503846765018 0.8273711641825947 0.06228383484090387 0.05389730715056633 3.199748278727274 0.008019320240765309 0.01561821647796563 1.5412348993308317e-07 6.8121311654939705 0.27198902279870985 LSS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 LSSLPR 6 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ES05 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 LS(0.136)S(0.864)LPR;LS(0.296)S(0.704)LPR 66.429 0.056027 97368000.0 2027.37 1794.95 1554.1100000000001 1663.9299999999998 1814.85 1419.48 1492.96 2057.09 2200.7 2438.8 2610.2 True False 2233.187109929087 1946.2167358775723 1659.5812502226195 1766.7071770407879 1687.38119689261 1407.9202255070948 1549.7754097790598 2016.059726194114 2108.2122321403976 2284.8137517917885 2289.1619474210793 0.9755478909847106 0.8501874400236901 0.7249732820748083 0.7717702886993741 0.7371174410764505 0.6150374057603165 0.6770055790613694 0.8806977280333371 0.920953729165149 0.9981005294823333 1.0 11.160603815042183 -8.591598845105748 2.596127404723612 0.9644790849332983 0.7603673902067484 0.5054870288731006 0.09050760848217454 0.17834260437023775 2.4139982066584267 0.017013838530925512 0.019512119817836324 2.5609503273351206e-09 8.591598845105748 -0.20411169472654989 LSS(ph)LRAS(ph)TSK ddPTM_A549_MK2206_60min_R1 2 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.028)S(0.972)LRAS(0.568)T(0.38)S(0.053)K;LS(0.032)S(0.968)LRAS(0.536)T(0.383)S(0.08)K 96.135 0.00021215 397049000.0 17187.6 21947.0 24052.0 22471.5 28413.0 19378.2 17543.2 14743.6 21718.0 19773.6 20922.1 True False 20088.446683524715 23064.008556783734 27462.9352672135 27977.01850878396 24233.485338473514 21428.788261791888 20730.57235714105 16833.550450381328 16798.907676519444 15306.730026638383 15726.565149415368 1.2773575470974028 1.4665636353301938 1.746276762045171 1.7789656064740875 1.5409267763326175 1.3625854125297348 1.3181881841446925 1.0703895154758007 1.0681866966445588 0.9733040801479405 1.0 13.940915984630697 -7.901246661619307 1.2623764570901945 1.028815024152132 1.5766771247757236 0.7660253654195615 0.1315812818642014 0.15027228197595338 0.4826762982309291 0.024189558004571125 0.03686414137735325 1.25531679225634e-08 7.901246661619307 0.5478621006235915 LSS(ph)LRAS(ph)TSK ddPTM_A549_PD325901_60min_R1 1 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.294)S(0.682)LRAS(0.408)T(0.282)S(0.334)K 98.654 0.0015469000000000001 107980000.0 16904.0 16068.0 14938.0 16306.0 17665.0 15267.0 15145.0 14877.0 17039.0 14515.0 16266.0 True False 18620.081635932915 17422.10675065091 15951.782509491268 17313.1845863871 16424.27134094164 15142.670613757711 15721.35126266199 14580.266564219275 16322.910084718607 13598.520422854606 14265.385118669563 1.3052631584102292 1.2212854126069155 1.118216043716525 1.2136499955916917 1.1513373949818342 1.0614974981600753 1.1020628697985138 1.0220731121473627 1.144231995766893 0.9532529482893378 1.0 13.800231075035143 -2.0000000000000004 0.1849751438227098 1.0281283415295501 2.0981102498147375 0.706561251993342 0.05426728881941254 25.064338166307227 0.2672843643798527 0.05479609031916985 7.6845178025052245 0.00999999999999999 2.0000000000000004 1.0699819082851874 LSS(ph)LRAS(ph)TSKS(ph)ESSQK ddPTM_A549_PD325901_60min_R1 1 LSSLRASTSKSESSQK 16 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 3 LS(0.431)S(0.569)LRAS(0.94)T(0.074)S(0.179)KS(0.655)ES(0.084)S(0.067)QK 91.729 3.3625e-05 53802000.0 5286.5 4948.1 4365.2 4652.0 4487.9 5664.7 4993.6 4786.7 4832.6 4836.7 6194.8 True False 5823.18158828439 5365.093752358458 4661.448722080019 4939.343474541444 4172.685386414492 5618.568561325301 5183.634180602768 4691.225513406495 4629.502627819192 4531.309936563613 5432.8788720726825 1.0718408647426376 0.9875231674936342 0.8580071140628326 0.909157665916643 0.7680431470438035 1.0341788752565684 0.9541229065954077 0.8634879635401772 0.8521269729786932 0.8340531867655804 1.0 12.407501166641303 -5.487389776272148 4.007485658176944 0.9170877359322833 1.0619841326402681 0.3134797729191172 0.07512980333800254 0.22662382229155753 7.570968472478868 0.010798364903909374 0.06578057332968218 3.2554439602314835e-06 5.487389776272148 0.14489639670798482 LSS(ph)LRAS(ph)TSKSESSQK ddPTM_A549_MK2206_60min_R1 3 LSSLRASTSKSESSQK 16 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.46)S(0.54)LRAS(0.829)T(0.141)S(0.025)KS(0.004)ESSQK;LS(0.089)S(0.911)LRAS(0.516)T(0.402)S(0.08)KS(0.002)ESSQK;LS(0.393)S(0.608)LRAS(0.854)T(0.083)S(0.049)KS(0.006)ES(0.007)S(0.002)QK 135.54 1.8888e-10 324444000.0 23036.9 35617.0 36226.8 35923.9 45191.4 27914.3 22336.4 16345.599999999999 32918.9 38995.3 37271.8 True False 26924.965521869897 37429.75316749288 41364.30497830908 44725.25711268515 38543.80492468557 30868.172697987302 26394.634752955295 18662.63885630058 25462.821710681266 30186.234646587967 28016.183410650956 0.9610504445667568 1.3360047162335165 1.47644325324425 1.5964079209904758 1.375769295900323 1.1017979232050608 0.9421210007827406 0.6661378026674959 0.9088611870309582 1.07745706130379 1.0 14.773972813206917 -7.458035560773642 2.902929658597885 0.9292550009705052 1.3688557882496712 0.5833407476387189 0.1728484217511296 0.14512192629652085 2.409710583152375 0.026780142912560055 0.04365282287750488 3.483087937496476e-08 7.458035560773642 0.43960078727916607 LSS(ph)LRAS(ph)TSKSESSQK ddPTM_A549_PD325901_60min_R1 3 LSSLRASTSKSESSQK 16 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.096)S(0.904)LRAS(0.877)T(0.107)S(0.014)KS(0.001)ESSQK;LS(0.108)S(0.892)LRAS(0.869)T(0.109)S(0.02)KS(0.001)ESSQK;LS(0.1)S(0.9)LRAS(0.983)T(0.016)S(0.002)KSESSQK 131.18 1.3481e-10 539620000.0 14805.7 14911.0 16347.5 16375.4 16466.7 19093.8 17980.6 18693.6 18705.100000000002 18306.5 16733.5 True False 16308.763764619736 16167.602300159047 17456.93965550331 17386.871266768267 15310.135799031075 18938.306423329217 18664.861572361853 18320.7414831545 17918.989695737433 17150.624465793164 14675.385582396239 1.111300529246932 1.101681602121091 1.189538738692063 1.1847641868861403 1.0432527113560988 1.2904810110097915 1.2718481206211825 1.248399326906342 1.2210234337714465 1.168666020357658 1.0 13.841110788881574 -10.741161606642807 1.0168938450186684 1.0010705966646782 1.1866791925919231 0.05827340559938399 0.08639189814356009 0.38617719181591653 0.7156780361903115 0.050618536140593 0.013303973932876205 1.814840211388539e-11 10.741161606642807 0.18560859592724488 LSS(ph)LRAST(ph)SKSESSQK ddPTM_A549_PD325901_60min_R1 1 LSSLRASTSKSESSQK 16 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.458)S(0.542)LRAS(0.161)T(0.712)S(0.116)KS(0.003)ES(0.006)S(0.001)QK 100.19 6.7134e-07 252770000.0 3874.9 4077.6 4084.6 5128.5 4225.5 5226.8 4652.9 5971.3 4813.7 4660.7 4674.2 True False 4268.276995449387 4421.233662338444 4361.805518695144 5445.275797331428 3928.7154571836345 5184.23467374002 4829.968655664578 5852.197737105768 4611.396929092672 4366.42260659996 4099.3030321950855 1.0412201688743707 1.0785330158846471 1.064035882304484 1.328341855814354 0.9583862003682843 1.2646624640881887 1.1782414273184965 1.4276079838801394 1.1249221862535426 1.0651621927695933 1.0 12.001162926717182 -9.932291411782385 1.2265400437391083 1.0209174361615705 1.1639189299765715 0.12564088419846242 0.13008920845818175 0.5115347281329493 1.549938320064249 0.038619437781036735 0.02358685647062697 1.1687149196499846e-10 9.932291411782385 0.14300149381500105 LSS(ph)LRASTS(ph)K ddPTM_A549_PD325901_60min_R1 1 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 LS(0.072)S(0.928)LRAS(0.339)T(0.212)S(0.45)K 138.31 9.9171e-07 124910000.0 23890.0 22112.0 23710.0 23208.0 27297.0 21476.0 23244.0 22349.0 25669.0 24539.0 24650.0 True False 26315.295213111534 23975.45584207075 25319.103179812428 24641.505450807796 25379.752889537736 21301.1065763451 24128.563139604863 21903.23166254868 24590.22119635203 22989.60335214807 21618.206269224425 1.2172746843744322 1.1090400167104564 1.1711935238520035 1.1398496778101024 1.1739990160824874 0.9853318222182593 1.1161223479467939 1.0131845070666208 1.1374774063174036 1.0634371356182293 1.0 14.39995920262891 -14.999999742743672 0.018611932662118445 2.266511666476151e-11 1.923566700610472 0.3911577114817446 0.057429875173001924 2042.354392652314 2.953880814492797 200.15049693193532 115.9195780014256 1.000000592354762e-15 14.999999742743672 1.9235667005878068 LSS(ph)PER ddPTM_A549_MK2206_60min_R1 2 LSSPER 6 0 M0QXB4;O14579-3;O14579;M0R061;O14579-2;Q8TDZ2-3;Q8TDZ2-2;Q8TDZ2;Q8TDZ2-4 M0QXB4 COPE;MICAL1 Coatomer subunit epsilon;Protein-methionine sulfoxide oxidase MICAL1 1 LS(0.221)S(0.779)PER;LS(0.034)S(0.966)PER 91.516 0.037107 198612000.0 7473.3 8615.8 7262.8 7625.4 8896.8 7898.6 7401.9 7854.599999999999 9219.4 12076.599999999999 11708.599999999999 True False 8734.610335357198 9054.30741894278 8292.774249905124 9493.623342317213 7588.092505519694 8734.424609333655 8746.729418254503 8968.01360370366 7131.220620356545 9348.487672437042 8801.031479079296 0.9924530273661688 1.0287779836335706 0.9422502657350632 1.0786943967743166 0.8621821798453002 0.9924319246097494 0.9938300344733599 1.018973017540193 0.8102710048598263 1.062203639955054 1.0 13.103456901883158 -8.711968392628194 24.999997925436865 0.91040519459704 0.9875648581611207 0.0 0.07974253752259472 148.98312219145743 75287.89316993533 0.013614460909269264 0.015437336603710598 1.9410271378125787e-09 8.711968392628194 0.07715966356408077 LSS(ph)PER ddPTM_A549_PD325901_60min_R1 2 LSSPER 6 0 M0QXB4;O14579-3;O14579;M0R061;O14579-2;Q8TDZ2-3;Q8TDZ2-2;Q8TDZ2;Q8TDZ2-4 M0QXB4 COPE;MICAL1 Coatomer subunit epsilon;Protein-methionine sulfoxide oxidase MICAL1 1 LS(0.06)S(0.94)PER;LS(0.182)S(0.818)PER 115.69 0.019718 297570000.0 7478.9 8188.9 8030.4 8269.3 9388.6 8769.5 8595.5 8059.9 9000.3 9043.6 9769.900000000001 True False 8238.152422324809 8879.00734194705 8575.391234718078 8780.07588005709 8729.177124911672 8698.084099518455 8922.606456138079 7899.13897163077 8622.04869038635 8472.585552609567 8568.264236498819 0.9614727318086421 1.0362667509861025 1.0008317901995716 1.0247204845359463 1.0187801034108404 1.0151512441069026 1.0413551928207168 0.9219065558205208 1.0062771703116276 0.9888333644658527 1.0 13.064787256674661 LSS(ph)PISK ddPTM_A549_MK2206_60min_R1 2 LSSPISK 7 0 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 LS(0.065)S(0.934)PISK;LS(0.081)S(0.919)PISK 108.81 0.008856200000000002 102745000.0 11462.7 12858.3 12987.599999999999 11676.4 14873.599999999999 10903.5 10542.9 11265.8 16808.1 17588.6 18565.7 True False 13397.323523891579 13512.73254776016 14829.43697307758 14537.118524173513 12685.713142938772 12057.301132842476 12458.408460491944 12862.761650065522 13001.092187020284 13615.32304418678 13955.324302746902 0.9600152051826206 0.9682850971152549 1.0626364999743232 1.0416897672031953 0.9090231704928401 0.8639929012949683 0.8927351446816387 0.9217099775698997 0.9316223618293993 0.9756364487715131 1.0 13.768528030612572 -6.758761796653217 24.996692819019607 0.9463466178536979 1.009200091802255 0.3725646837503578 0.04633272938145365 86.03283915756559 803146.0043221563 0.008104655501662691 0.016282711366425423 1.7427624877243927e-07 6.758761796653217 0.06285347394855711 LSS(ph)PISK ddPTM_A549_PD325901_60min_R1 2 LSSPISK 7 0 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 LS(0.122)S(0.869)PIS(0.009)K;LS(0.084)S(0.913)PIS(0.003)K 111.06 0.0082176 68436200.0 10934.099999999999 10013.4 11736.7 11049.800000000001 12452.9 10255.1 10942.8 10235.3 11789.2 12009.7 12538.7 True False 12044.121782741007 10857.264360030356 12533.223040510518 11732.321050083425 11578.251264172783 10171.585865667563 11359.23424212992 10031.148912062486 11293.740922047342 11251.405492411777 10996.519389368135 1.0952667254318431 0.9873364448870597 1.1397445497734608 1.0669122323766091 1.0529014549246454 0.9249823062651851 1.0329845144557714 0.912211269482323 1.0270286917300917 1.023178798128622 1.0 13.424759334725886 -7.020513280467844 24.163101441683935 1.0004026031663698 1.0696671752972051 0.3817680585219285 0.050549250032866526 450.44547936374704 530591.5314177318 0.006993786456386329 0.012215846912886517 9.538645737822644e-08 7.020513280467844 0.06926457213083537 LSS(ph)PISKR ddPTM_A549_PD325901_60min_R1 2 LSSPISKR 8 1 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 LS(0.142)S(0.857)PIS(0.001)KR;LS(0.106)S(0.894)PISKR 78.098 0.0018169 58645000.0 7311.3 7075.8 7139.5 7599.5 7822.900000000001 8735.8 8214.6 8499.3 9379.2 7331.2 9264.3 True False 8053.537793705413 7672.102498522259 7624.029403301175 8068.903855283258 7273.446491539904 8664.658541145256 8527.211098201604 8329.77479392814 8985.024841046588 6868.306780849583 8124.8498312363445 0.991222971622593 0.9442762214541519 0.9383594234554659 0.9931142141559344 0.8952099598908053 1.0664392230159865 1.0495223019899227 1.025222000030567 1.1058696502307357 0.8453456892758897 1.0 12.988125433108053 -7.277626804104342 24.914006195507927 1.0500822640751921 0.9534610115564786 0.0611312942854384 0.07079251138746509 452.0861758140876 695802.8971587796 0.006496927417476481 0.010405058046928884 5.276831128276249e-08 7.277626804104342 -0.09662125251871356 LSS(ph)PSIKDLPAGR ddPTM_A549_PD325901_60min_R1 1 LSSPSIKDLPAGR 13 1 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 LS(0.294)S(0.691)PS(0.015)IKDLPAGR 45.54 0.013211 4251000.0 2238.8 1561.2 2252.8 2250.5 2225.9 2543.7 2381.8 2613.1 2303.8 2142.0 2635.7 True False 2466.08132788255 1692.7678030318757 2405.6885551869013 2389.508273743663 2069.5604629381264 2522.9849505610473 2472.4407023709705 2560.9796705627055 2206.9792976803074 2006.7537544439942 2311.5256090788976 1.066863078737527 0.7323162660985677 1.0407362763960577 1.0337364484989806 0.8953223164863875 1.0914804234275444 1.0696142377398081 1.1079174985144167 0.9547717269547146 0.8681512099896874 1.0 11.174629630747283 LSS(ph)PVK ddPTM_A549_MK2206_60min_R1 4 LSSPVK 6 0 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.061)S(0.939)PVK;LS(0.078)S(0.922)PVK;LSS(1)PVK;LS(0.075)S(0.925)PVK 121.31 0.016693 861816000.0 27621.699999999997 26849.4 23973.1 22451.8 28977.5 22183.4 24437.199999999997 24282.2 32104.0 33848.9 32824.7 True False 32283.567674271864 28215.91977694034 27372.84606080308 27952.492007899597 24714.94813626213 24530.83266385083 28877.122919759644 27724.276211118715 24832.495259553365 26202.40998091799 24673.421074367037 1.3084349988178547 1.1435754973700654 1.1094061896929424 1.1328989167594254 1.001683068666073 0.9942209712189307 1.1703736921087036 1.1236494577527874 1.0064471880371542 1.0619690679270821 1.0 14.590670144836427 -2.0000000000000004 0.34212715476982186 1.011255038496635 3.978251962871026 0.5403850170969815 0.06229513580292483 25.34117353751365 0.3131553183918194 0.017136821820516335 48.890901077400216 0.00999999999999999 2.0000000000000004 2.9669969243743908 LSS(ph)PVK ddPTM_A549_PD325901_60min_R1 4 LSSPVK 6 0 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.06)S(0.94)PVK;LS(0.079)S(0.921)PVK;LS(0.007)S(0.993)PVK;LS(0.164)S(0.836)PVK 96.492 0.034983 1420999000.0 19654.9 18811.1 18809.8 18579.6 21027.6 17587.2 17620.1 19812.5 18165.2 18139.5 20394.4 True False 21650.250978827367 20396.377414561186 20086.346140516052 19727.219694666866 19550.693917281897 17443.975674217578 18290.642547588686 19417.32414489443 17401.779815184604 16994.16887429356 17886.018090753383 1.2104567304457774 1.1403531692224775 1.12301944673198 1.1029408331452677 1.0930713486971764 0.9752855882011922 1.0226223888840011 1.085614698943679 0.9729264348771335 0.9501370728837131 1.0 14.126544619922154 -5.851447818350117 0.4157987147624246 0.9873194222605536 1.2863919811876037 0.7963644270961925 0.035599861384847 1.055556242085735 0.1667938344541107 0.00870916524771155 0.14277107844285453 1.407836373526598e-06 5.851447818350117 0.2990725589270501 LSS(ph)PVKR ddPTM_A549_MK2206_60min_R1 1 LSSPVKR 7 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.353)S(0.647)PVKR 53.968 0.018239 7305100.0 2011.0 2102.9 1833.2 1822.9 2594.3 1954.3 1982.1 2256.6 3276.8 2757.5 2356.3 True False 2350.407635770452 2209.9286277878778 2093.17532562181 2269.51058183309 2212.681906648428 2161.1027288406517 2342.221913282027 2576.4799605476624 2534.61003197435 2134.5788348330752 1771.1656794283306 1.327039961913151 1.2477255253168436 1.1818066203142625 1.2813654917735349 1.2492800263398303 1.2201584267024523 1.3224183036552588 1.4546803782801723 1.4310406199788335 1.2051830382813433 1.0 10.790483456497695 -10.933510558329242 1.217057136975903 1.0015881610650712 1.3088181066817843 0.3184191183592764 0.09775971345493628 0.2556311897090321 0.6784736336847125 0.06452713445044601 0.015498387202070675 1.165438716985912e-11 10.933510558329242 0.30722994561671313 LSS(ph)PVKRPR ddPTM_A549_MK2206_60min_R1 2 LSSPVKRPR 9 2 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.025)S(0.975)PVKRPR;LS(0.135)S(0.865)PVKRPR 64.439 0.0012887 104175500.0 3445.02 4021.7999999999997 3665.7 3883.3900000000003 5397.599999999999 4150.5 3660.2999999999997 4061.7 6259.8 5452.4 6564.200000000001 True False 4026.4551533475496 4226.492441503294 4185.5513807177995 4834.820724332005 4603.620190157484 4589.703155121078 4325.329130309373 4637.458413434567 4841.965294846509 4220.699053143739 4934.127977296369 0.8160418967393355 0.856583465396692 0.8482859382604121 0.9798733933490759 0.9330159678347084 0.9301954015461074 0.876614702782682 0.9398739624859993 0.9813213838648019 0.8554093190457638 1.0 12.268579420206159 -2.000000000020765 0.17174398797090137 1.0147643582099646 0.2180431768635297 0.14076203126972164 0.05553211537312968 21.887054820515026 0.22353983356987944 0.04345174670540767 4.539852125854638 0.009999999999521864 2.000000000020765 -0.7967211813464349 LSS(ph)PVKRPR ddPTM_A549_PD325901_60min_R1 1 LSSPVKRPR 9 2 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.113)S(0.887)PVKRPR 46.955 0.011631 260830000.0 7633.4 7455.1 8992.7 8670.1 8856.2 11714.0 9610.7 9889.5 9098.2 8704.4 9937.0 True False 8408.337148587929 8083.367440675726 9602.99869949807 9205.63238577425 8234.171064231385 11618.605067764325 9976.440447676829 9692.24616433733 8715.834293842763 8154.802698497804 8714.811995832993 0.9648328790808561 0.9275435252694845 1.10191690929073 1.0563202499578812 0.944847814062836 1.3332020327368836 1.1447682924711498 1.1121578031713935 1.000117305801922 0.9357405188312773 1.0 13.089253826166802 -3.207927043862888 15.714746140349312 1.0349946869980122 1.0467836670925632 0.0 0.1162883232485667 0.0 0.0 0.015064562914190352 0.0 0.0006195451423075535 3.207927043862888 0.011788980094550983 LSS(ph)PVLHR ddPTM_A549_MK2206_60min_R1 5 LSSPVLHR 8 0 Q16643;Q16643-3;Q16643-2;D6R9W4;D6RCR4 Q16643 DBN1 Drebrin 1 LS(0.057)S(0.943)PVLHR;LS(0.007)S(0.993)PVLHR;LS(0.062)S(0.938)PVLHR;LS(0.003)S(0.997)PVLHR;LS(0.03)S(0.97)PVLHR 169.41 6.5574e-06 1755970000.0 16301.54 19314.69 16422.3 14560.830000000002 22433.6 17304.38 16230.220000000001 17561.85 25933.899999999998 25349.8 27758.7 True False 19052.841417611864 20297.72522128879 18751.229080274414 18128.23400366051 19133.64715761022 19135.518005882197 19179.040886629464 20051.29601840999 20059.913057928323 19623.26257379927 20865.44868885421 0.9131287662071416 0.9727912169044952 0.8986736571014091 0.8688159202320029 0.9170014718078373 0.9170911343068268 0.9191770171170304 0.960980821328845 0.9613938025997887 0.9404668390515617 1.0 14.348828324077182 -8.837935146267727 0.7009545143882324 0.9916152628526061 0.9128087244304266 0.3621120369675157 0.02860102152680678 0.2942306780629355 0.30769842627678734 0.00733102176299403 0.0070673342947342324 1.4523284794038062e-09 8.837935146267727 -0.07880653842217955 LSS(ph)PVLHR ddPTM_A549_PD325901_60min_R1 8 LSSPVLHR 8 0 Q16643;Q16643-3;Q16643-2;D6R9W4;D6RCR4 Q16643 DBN1 Drebrin 1 LS(0.094)S(0.906)PVLHR;LS(0.068)S(0.932)PVLHR;LS(0.007)S(0.993)PVLHR;LS(0.243)S(0.757)PVLHR;LS(0.086)S(0.914)PVLHR;LS(0.06)S(0.94)PVLHR;LS(0.006)S(0.994)PVLHR;LS(0.077)S(0.923)PVLHR 158.08 0.00032965 3135800000.0 22665.6 24858.71 22081.51 23150.750000000004 26932.85 27300.850000000002 24178.6 26610.75 26418.48 25407.910000000003 27650.050000000003 True False 24966.595026467156 26953.640733350327 23580.09405550654 24580.71924833197 25041.17952928843 27078.520929167968 25098.729854037578 26079.977715520472 25308.203158338936 23803.650226458954 24249.26913810828 1.0295813405457066 1.1115238393305662 0.9724043195367849 1.0136684577310748 1.0326570828452577 1.1166736933367387 1.0350303636407066 1.0754954125415348 1.0436686983925019 0.9816234085608367 1.0 14.56565364533514 -10.318173692448624 0.879179310509236 1.0020514151485873 1.0480542574170948 0.21824591359712087 0.040126233503896824 0.76747903379688 1.1397396108086029 0.020138542399648966 0.007443668217031485 4.806470792215041e-11 10.318173692448624 0.04600284226850748 LSS(ph)QISAGEEKWNSVSPASAGK ddPTM_A549_PD325901_60min_R1 2 LSSQISAGEEKWNSVSPASAGK 22 1 E5RJU9;Q86UE4;H0YB56 E5RJU9 MTDH Protein LYRIC 1 LS(0.075)S(0.592)QIS(0.333)AGEEKWNSVSPASAGK;LS(0.095)S(0.659)QIS(0.246)AGEEKWNSVSPASAGK 161.39 2.1736999999999995e-33 15114700.0 4988.1 5915.1 5881.8 6500.9 6369.0 7641.5 5893.9 6325.0 6361.7 6519.2 7216.4 True False 5494.488239954859 6413.5862360452575 6280.974318136685 6902.445828384883 5921.663411857196 7579.27015753125 6118.195589765834 6198.842913133492 6094.339872407676 6107.5765994263675 6328.8285485286515 0.8681682870414047 1.0133923184783242 0.9924386906636786 1.0906356169167495 0.9356650075840472 1.1975786829133341 0.9667184918744897 0.9794613435332549 0.9629491185733748 0.9650406157465394 1.0 12.627722769524137 -5.257790740751601 23.538375188853966 1.000363320626779 0.8681681679526737 0.23792192987257 0.07114513334392256 171.3671182750116 1105418.2802721087 0.009029341204155475 0.09048021949521318 5.523435148400079e-06 5.257790740751601 -0.1321951526741053 LSS(ph)SASREPYK ddPTM_A549_MK2206_60min_R1 3 LSSSASREPYK 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 LS(0.087)S(0.448)S(0.448)AS(0.018)REPYK;LS(0.091)S(0.494)S(0.382)AS(0.033)REPYK;LS(0.054)S(0.446)S(0.446)AS(0.054)REPYK 83.617 0.00016494 28131700.0 9260.2 10340.1 11149.0 9066.7 12665.1 9877.0 8593.6 7753.8 13668.2 17185.4 16937.2 True False 10823.095369846615 10866.366923862015 12730.09584625657 11288.041907019626 10802.080567356514 10922.177584178022 10154.945882639848 8852.924895016606 10572.374523630304 13303.206204221351 12731.225797060428 0.8501220182855928 0.853520870423255 0.9999112457180582 0.8866421888162548 0.8484713679220627 0.8579046321446827 0.7976408591374265 0.6953709749661889 0.8304286399563668 1.044927363341006 1.0 13.636083712080302 -10.634632412809225 1.0418071798829907 0.9952210665997857 0.848009325367238 0.46884042650150226 0.070320537985813 0.42911186069028834 0.8674597748079326 0.042873014406124656 0.01315347564611109 2.3193569249397386e-11 10.634632412809225 -0.14721174123254765 LSS(ph)SASREPYK ddPTM_A549_PD325901_60min_R1 1 LSSSASREPYK 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 LS(0.065)S(0.523)S(0.411)AS(0.001)REPYK 88.552 8.4883e-05 35192000.0 3621.1 4229.3 3131.3 3928.1 5353.4 4435.9 4492.2 5201.9 4527.6 4594.8 5269.0 True False 3988.7114062870714 4585.717953729641 3343.8088480365523 4170.729815637631 4977.395652227397 4399.775501117958 4663.15312922616 5098.144023688393 4337.32071715312 4304.683543846529 4620.9464029429455 0.8631806254551617 0.9923763562393044 0.7236199160213108 0.9025704805797824 1.077137715567841 0.9521373150564719 1.009133783992027 1.1032683738641795 0.9386217322042099 0.9315588558017037 1.0 12.173972640849753 -6.536595645029422 24.45868863248533 0.9882309479568434 0.8630081213246922 0.4038260460435511 0.07678438182807308 138.9244804515908 247716.5609174044 0.010403340458993193 0.021665673229571622 2.9067277379183276e-07 6.536595645029422 -0.12522282663215123 LSS(ph)SKENLDASK ddPTM_A549_MK2206_60min_R1 2 LSSSKENLDASK 12 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 LS(0.011)S(0.815)S(0.174)KENLDASK;LS(0.065)S(0.524)S(0.411)KENLDASK 151.11 7.3477e-13 82039400.0 9788.9 10581.570000000002 10364.640000000001 10482.6 14323.2 13372.1 13189.3 14024.7 16034.4 17604.1 16143.2 True False 11441.027004372643 11120.126715460254 11834.501803923651 13050.837470581791 12216.276253828306 14787.126746318414 15585.625084935487 16012.74417384243 12402.634001675264 13627.321583421555 12134.397910345626 0.9428590597493244 0.9164135540651244 0.975285456382942 1.0755241065116894 1.0067476230866692 1.2186123164554465 1.284416845408324 1.3196158797619597 1.0221054306370605 1.1230323650259633 1.0 13.566814905565629 -6.125390392967699 2.6736379988792964 1.0708465806041652 0.9293927267786541 0.2487768515901153 0.11448976342763832 0.41876036035378605 5.747411570590598 0.019360664068095994 0.062383262148388456 7.492204225414236e-07 6.125390392967699 -0.141453853825511 LSS(ph)SKENLDASK ddPTM_A549_PD325901_60min_R1 3 LSSSKENLDASK 12 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 LS(0.002)S(0.499)S(0.499)KENLDASK;LS(0.082)S(0.629)S(0.289)KENLDASK;LS(0.018)S(0.577)S(0.405)KENLDASK 133.25 1.4605999999999999e-08 245839800.0 14621.2 15243.2 15769.900000000001 14417.1 18420.1 15298.0 15807.9 15909.0 16536.6 15616.2 16214.4 True False 16105.533460441455 16527.797960015047 16840.14024611235 15307.61152339026 17126.33572189523 15173.418160035744 16409.478284914792 15591.682514630931 15841.624209575544 14630.19046692264 14220.131591550216 1.1325868088317528 1.162281646524008 1.1842464422846113 1.076474674291076 1.2043725201581057 1.067037816235961 1.1539610712650166 1.0964513523838069 1.1140279615266597 1.0288365035676665 1.0 13.795647195111455 -12.731908468928976 0.20015615974517095 0.7667011520804287 1.163503796019979 0.5865444591872203 0.039467493874075846 8.029454048467851 0.21013061181293038 0.8385416441486101 0.03493445858159967 1.8539223113492709e-13 12.731908468928976 0.39680264393955034 LSS(ph)SLDNKEK ddPTM_A549_PD325901_60min_R1 1 LSSSLDNKEK 10 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LS(0.073)S(0.532)S(0.395)LDNKEK 95.417 0.00015551 27079000.0 3331.7 3911.2 4255.4 3313.0 4548.0 3789.4 4136.5 3856.1 4513.6 4402.1 4788.8 True False 3669.9317313320903 4240.8105503575935 4544.197033798978 3517.636485631085 4228.564169748239 3758.540382771566 4293.916771079654 3779.18706044807 4323.9090884668085 4124.150654732915 4199.8079587043385 0.873833224618271 1.0097629682253149 1.0820011482622374 0.8375707937646495 1.0068470299896217 0.8949314872795027 1.022407884670124 0.8998475877011214 1.0295492391515815 0.9819855325016423 1.0 12.036107645087013 -8.795679664640344 24.999724945219665 1.013953817238758 0.9578375358712482 0.08469556326555072 0.07070093499097267 271.3254728890527 198100.63079595612 0.011242727628389036 0.011969085043930247 1.6007382969241747e-09 8.795679664640344 -0.0561162813675099 LSS(ph)SSATLLNSPDR ddPTM_A549_MK2206_60min_R1 1 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LS(0.002)S(0.496)S(0.496)S(0.005)ATLLNSPDR 312.66 3.434999999999999e-136 40786000.0 5655.1 6017.6 6198.4 4855.7 7706.3 6348.7 6014.1 6878.0 10132.0 10223.0 10882.0 True False 6609.542626079307 6323.870136752257 7077.426324642277 6045.346717980658 6572.71347847388 7020.515220074015 7106.784122228666 7852.977562991591 7837.118177479281 7913.617199818144 8179.699072078721 0.8080422724401783 0.773117700422341 0.8652428729072644 0.7390671300630554 0.8035397660177669 0.8582852692024378 0.8688319777542387 0.9600570257893242 0.9581181542767466 0.9674704570527731 1.0 12.997832052620597 -8.038028661198123 1.010421486407998 0.984260272310571 0.7953315246824114 0.8584348246518803 0.03150608949159597 0.11331118713752239 0.23024880132442102 0.005814721145814271 0.008582580482016718 9.161600262856098e-09 8.038028661198123 -0.1889287476281596 LSS(ph)SSSNDSGNK ddPTM_A549_MK2206_60min_R1 1 LSSSSSNDSGNK 12 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LS(0.001)S(0.969)S(0.007)S(0.023)SNDSGNK 203.88 6.6136e-25 7082500.0 2836.6 2582.0 2735.3 2160.0 4213.6 3223.3 3330.7 3730.1 3932.6 4261.8 4564.2 True False 3315.348731788397 2713.412771386322 3123.2066703978485 2689.200096966086 3593.785021722167 3564.387466546626 3935.845076720874 4258.853097952159 3041.872379071753 3299.056420051354 3430.7831744882997 0.9663533260981672 0.7909018534204008 0.9103480201320719 0.7838443761072659 1.0475115560919057 1.0389427968085605 1.1472147543418871 1.241364691776934 0.8866408118389608 0.9616044652962971 1.0 11.744322235105846 -6.768240513816689 24.997864782722566 0.9963876597183798 0.8611137543538867 0.3531843222867993 0.1065381396825782 188.73549657423914 693708.030766668 0.01767936010345223 0.033949223920291795 1.7051378161334197e-07 6.768240513816689 -0.13527390536449313 LSS(ph)SSSNDSGNK ddPTM_A549_PD325901_60min_R1 1 LSSSSSNDSGNK 12 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LS(0.062)S(0.847)S(0.028)S(0.062)S(0.001)NDSGNK 113.8 3.0028e-05 6234800.0 3747.0 3771.8 2895.3 3078.7 3829.3 3413.5 3027.7 3770.6 4644.6 5880.4 6777.1 True False 4127.39268160439 4089.6628231332506 3091.7924688532635 3268.864306764994 3560.343178367838 3385.7015877423164 3142.9207803210106 3695.3924250215223 4449.403614031581 5509.11054044466 5943.559663576506 0.6944311010955265 0.6880830772500932 0.5201920471666963 0.5499842673065676 0.5990253955363544 0.5696420629022487 0.5287943519069134 0.621747342365844 0.7486092284558941 0.9269042210858504 1.0 12.53711152054089 -9.598840573452781 0.688122265899501 0.9760129376099456 0.5868287009957898 0.8337021364010528 0.06217218929647334 0.16968952863085532 0.1735668677279639 0.028235018651444167 0.015987397861616924 2.5186013194748793e-10 9.598840573452781 -0.3891842366141558 LSS(ph)SVSAMR ddPTM_A549_PD325901_60min_R1 3 LSSSVSAMR 9 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 LS(0.026)S(0.486)S(0.486)VS(0.001)AMR;LS(0.115)S(0.442)S(0.442)VS(0.001)AMR;LS(0.024)S(0.486)S(0.486)VS(0.004)AMR 92.23899999999999 0.0010106 5976700.0 1495.6 2111.6 2548.1 2475.4 2120.3 2138.3 1844.7 2193.9 2154.0 2249.9 2535.6 True False 1647.4322109974717 2289.5519426608444 2721.0293889700574 2628.2998359587045 1971.3774426379043 2120.8863937511055 1914.9010679585729 2150.140943418745 2063.474870736774 2107.840930029665 2223.737274492719 0.7408394102551011 1.0295964226183776 1.2236289871926447 1.1819291182040714 0.8865154464290828 0.9537486366211693 0.8611183928620354 0.9669042148467099 0.9279310530096213 0.9478821775429868 1.0 11.11877063424501 -6.784757962667525 24.976432345896097 0.9517190506238559 1.0558006410408283 0.14822975110426362 0.12044175780987074 346.04967926328766 370651.5159629852 0.017507863240956302 0.033100600694340815 1.6415043476628187e-07 6.784757962667525 0.1040815904169724 LSS(ph)TDDGYIDLQFK ddPTM_A549_MK2206_60min_R1 1 LSSTDDGYIDLQFK 14 0 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 LS(0.352)S(0.568)T(0.076)DDGY(0.004)IDLQFK 72.49600000000001 0.0013938 6737600.0 792.78 719.16 606.0 778.53 743.2 797.97 833.04 699.85 1205.4 927.79 1120.1 True False 926.581882389905 755.7621722192827 691.9399123537079 969.2698849495392 633.8762645110872 882.4106557503835 984.392584955583 799.0558807007367 932.3788246282593 718.2015946218606 841.9482568126601 1.1005211720464152 0.8976349390880032 0.8218318723922126 1.1512226281207316 0.7528684326881735 1.0480580589250232 1.169184183220677 0.9490558050748867 1.1074063246569803 0.8530234355977364 1.0 9.717587762812737 -7.470868390341534 24.999885082205754 1.0533552491296623 0.9421926385385837 0.04797674665449991 0.13186531403990173 441.5614825701189 212245.98267401036 0.016337273218904838 0.026116775375419454 3.3816729972265174e-08 7.470868390341534 -0.11116261059107857 LSS(ph)TDDGYIDLQFK ddPTM_A549_PD325901_60min_R1 2 LSSTDDGYIDLQFK 14 0 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 LS(0.001)S(0.953)T(0.046)DDGYIDLQFK;LS(0.036)S(0.91)T(0.054)DDGYIDLQFK 344.54 5.175499999999998e-203 40771000.0 16260.3 18859.6 17631.9 18142.2 23648.2 20463.3 20210.1 18550.5 18656.9 20872.3 19951.6 True False 17911.033685799805 20448.964679771965 18828.506763227957 19262.802490074326 21987.2320138611 20296.653669385483 20979.206414891058 18180.495724914264 17872.81537411742 19554.41941591101 17497.679683612914 1.0236233609061895 1.1686672204271185 1.0760573460983744 1.1008775356720297 1.2565798672410708 1.1599625799753261 1.1989707660804132 1.039023233574268 1.0214391677803905 1.11754356974681 1.0 14.094876002699234 -8.414478587412836 5.131799377271953 1.0110068268747325 1.1426566960276117 0.28613235465721787 0.06685422972047542 0.13359524039474685 5.279742552297694 0.009564159083133022 0.01155970860967847 3.850537990201722e-09 8.414478587412836 0.13164986915287913 LSS(ph)TDDGYIDLQFKK ddPTM_A549_MK2206_60min_R1 2 LSSTDDGYIDLQFKK 15 1 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 LS(0.001)S(0.86)T(0.14)DDGYIDLQFKK;LSS(0.857)T(0.143)DDGYIDLQFKK 260.65 5.019499999999999e-78 46423000.0 17628.9 20476.6 20217.1 16830.6 26362.0 16891.4 15018.699999999999 12318.4 27574.0 27299.0 25075.0 True False 20604.22733477561 21518.771477369937 23084.18878225437 20954.097755554354 22484.184721530237 18678.836736396137 17747.40338479834 14064.570923517835 21328.53302662985 21132.136940021082 18848.185465206192 1.0931676883597667 1.1416892897777164 1.2247432955744122 1.1117302402523406 1.1929097770730297 0.9910151176556135 0.9415974507233125 0.7462029143060522 1.1315960926850168 1.1211761991111067 1.0 14.20213801994765 -7.263358113012174 24.92578681328609 1.0227703426799253 1.1539379841723287 0.36009215928384297 0.10369929056011672 191.57977561528662 2488768.3399421633 0.016910196233166874 0.027880236474186783 5.4530802246312566e-08 7.263358113012174 0.13116764149240345 LSS(ph)TDDGYIDLQFKK ddPTM_A549_PD325901_60min_R1 3 LSSTDDGYIDLQFKK 15 1 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 LS(0.07)S(0.507)T(0.423)DDGYIDLQFKK;LS(0.008)S(0.918)T(0.074)DDGYIDLQFKK;LSS(0.934)T(0.065)DDGYIDLQFKK 312.09 2.319199999999999e-143 140813000.0 26407.7 29453.7 30587.0 30768.4 34953.0 39365.0 35979.0 35071.0 33549.0 33928.0 36580.0 True False 29088.59026367875 31935.866666769147 32662.81775457288 32668.894187893613 32498.021861303885 39044.42449142414 37348.20053346423 34371.481392332724 32139.052199790174 31785.7802898113 32080.89189972536 0.9067263576898177 0.9954793889954956 1.0181393290643674 1.0183287388020932 1.0130024427900053 1.217061689352795 1.1641883476993968 1.0714004305044578 1.0018129265310518 0.9908010160429304 1.0 14.969426631112354 -5.024841282012063 1.281401980480264 1.0346431823233595 0.7880034946454604 0.24348436186393974 0.07157511744905048 3.2156374482117185 3.0251818477135872 0.011847154595395221 1.1971430526260833 9.444059574063188e-06 5.024841282012063 -0.24663968767789912 LSSDENSNPDLS(ph)GDENDDAVS(ph)IESGTNTERPDTPTNTPNAPGR ddPTM_A549_PD325901_60min_R1 1 LSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTPNAPGR 43 1 E9PJK2;A0A5F9ZI63;O75530-3;O75530;O75530-2 E9PJK2 EED Polycomb protein EED 2 LSSDENS(0.007)NPDLS(0.609)GDENDDAVS(0.244)IES(0.244)GT(0.244)NT(0.244)ERPDT(0.244)PT(0.079)NT(0.087)PNAPGR 47.522 0.01677 2036000.0 0.0 0.0 183.61 218.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 196.07087873662422 231.58215933624993 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LSSDENSNPDLS(ph)GDENDDAVSIESGTNTERPDTPTNTPNAPGRK ddPTM_A549_MK2206_60min_R1 2 LSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTPNAPGRK 44 2 E9PJK2;A0A5F9ZI63;O75530-3;O75530;O75530-2 E9PJK2 EED Polycomb protein EED 1 LSSDENSNPDLS(1)GDENDDAVSIESGTNTERPDTPTNTPNAPGRK;LSSDENSNPDLS(1)GDENDDAVSIESGTNTERPDTPTNTPNAPGRK 132.58 3.8313e-31 28844000.0 983.49 1088.65 851.26 516.84 1392.99 1005.94 714.55 1020.1899999999999 1629.3200000000002 1249.81 1802.49 True False 1149.4790679780613 1144.0576349998914 971.9814683006884 643.4658232018296 1188.0830162826942 1112.38790311107 844.3744857149851 1164.8050567008415 1260.2816214893944 967.4770529692578 1354.8819868067603 0.8483979262926059 0.8443965202432515 0.7173919778736545 0.4749238896580029 0.8768904065828017 0.8210219885886815 0.6232088801365205 0.8597096042630992 0.9301781511315802 0.7140673965630365 1.0 10.403951479810745 -8.6291259754811 2.6257474978796123 0.9692854376552943 0.743953132534092 0.09167263885159371 0.13526762945698 0.18649094994678864 2.5731645686670235 0.019938151957422837 0.022586358355548636 2.348951363422967e-09 8.6291259754811 -0.22533230512120228 LSSDENSNPDLS(ph)GDENDDAVSIESGTNTERPDTPTNTPNAPGRK ddPTM_A549_PD325901_60min_R1 2 LSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTPNAPGRK 44 2 E9PJK2;A0A5F9ZI63;O75530-3;O75530;O75530-2 E9PJK2 EED Polycomb protein EED 1 LSSDENSNPDLS(1)GDENDDAVSIESGTNTERPDTPTNTPNAPGRK;LSSDENSNPDLS(1)GDENDDAVSIESGTNTERPDTPTNTPNAPGRK 234.15 7.607899999999997e-140 71813000.0 1149.63 1678.94 1247.8200000000002 1752.34 1895.29 2100.8 1771.46 1889.02 1869.53 2272.66 1789.2599999999998 True False 1266.3395912871247 1820.4301660404424 1332.5045689512244 1860.5780619471095 1762.1713687955455 2083.6917813180203 1838.8738796801067 1851.3420141924792 1790.9601555657011 2129.163859745417 1569.1923630536523 0.8070008630572383 1.1601064400402004 0.849165851379857 1.1856915096925529 1.1229798272573515 1.3278753009370698 1.1718600746320569 1.1798056489325266 1.14132607176375 1.3568533150403936 1.0 10.615806503897716 -5.253870538782467 24.081737544275683 1.099589085842931 0.8070006243544602 0.2744949489484766 0.1401142867688193 510.48614431384476 1624142.7821669215 0.01674589892311676 0.2393434565708364 5.573518682378956e-06 5.253870538782467 -0.29258846148847073 LSSERPS(ph)SDGEGVVENGITTCNGK ddPTM_A549_PD325901_60min_R1 1 LSSERPSSDGEGVVENGITTCNGK 24 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LSS(0.001)ERPS(0.541)S(0.458)DGEGVVENGITTCNGK 183.12 9.6886e-51 20618000.0 3503.2 4173.3 4447.2 3591.5 4817.3 4036.2 4225.5 4361.1 3934.9 4578.3 5426.1 True False 3858.8422850804627 4524.998637197623 4749.013735186077 3813.338798111694 4478.9494667828 4003.3305253978438 4386.303714782321 4274.114439283234 3769.52983698335 4289.225356662436 4758.724098881895 0.8108985107977015 0.9508848471086635 0.9979594606675979 0.8013363916196933 0.9412080578143142 0.8412613217770836 0.9217394460445653 0.898163951191765 0.792130360713502 0.9013393648247495 1.0 12.216359097068992 -11.112832229682141 1.4771124537309925 0.9996444718495379 0.8758292726824115 0.051666026548512045 0.07007118121392678 0.3977469100943955 1.5596532619314514 0.04771426495001736 0.010476437053417916 7.712013307919066e-12 11.112832229682141 -0.12381519916712636 LSSERPS(ph)SDGEGVVENGITTCNGKEQVK ddPTM_A549_MK2206_60min_R1 2 LSSERPSSDGEGVVENGITTCNGKEQVK 28 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LS(0.056)S(0.052)ERPS(0.446)S(0.446)DGEGVVENGITTCNGKEQVK;LS(0.092)S(0.092)ERPS(0.408)S(0.408)DGEGVVENGITTCNGKEQVK 104.66 2.389e-15 12372900.0 2074.47 3177.3999999999996 2524.0 2238.54 3576.6 2428.97 2187.81 2274.9 4015.6 3685.8 3939.3999999999996 True False 2424.5898200779347 3339.1160882273043 2881.9411531035616 2786.98240049188 3050.486877893371 2686.001993180206 2585.306757528659 2597.374041589063 3106.0730115955184 2853.175220100725 2961.1382580910586 0.8188033143852534 1.1276461269930418 0.9732545061781234 0.9411861782801555 1.030173741316595 0.9070842895771359 0.87307870561752 0.8771539236616052 1.0489456218764652 0.9635400212417188 1.0 11.531936137421958 -8.787851556565343 24.99917087353475 1.0231132147053852 0.9499188303267637 0.08242911872232062 0.0818115290668172 305.5301533743401 289183.395502009 0.013630522364033275 0.014512923466478414 1.6298530271399316e-09 8.787851556565343 -0.07319438437862147 LSSERPSS(ph)DGEGVVENGITTCNGK ddPTM_A549_MK2206_60min_R1 2 LSSERPSSDGEGVVENGITTCNGK 24 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LSSERPS(0.113)S(0.887)DGEGVVENGITTCNGK;LSSERPS(0.124)S(0.876)DGEGVVENGITTCNGK 232.07 2.740199999999999e-89 190689000.0 6610.3 8389.1 7852.6 6259.2 9794.6 7966.5 7720.9 8099.6 10709.4 10233.5 9625.9 True False 7725.957033681457 8816.06935725677 8966.216758661263 7792.704280986166 8353.827314828159 8809.509742265287 9123.687589051611 9247.743103984692 8283.737999397614 7921.745242525579 7235.523368675112 1.0677813670161842 1.218442524202789 1.2391939465607802 1.077006304025396 1.1545574368530882 1.2175359394739107 1.2609575180906698 1.2781028590165464 1.144870602624346 1.0948406685854046 1.0 12.820881659965524 -10.005265684866172 0.8992426236659147 1.0146873979577717 1.1879928906768233 0.34071225071430955 0.07037393913633232 0.3131867158791141 0.5125122513184336 0.027676624989066805 0.01363486786173641 9.87948520373149e-11 10.005265684866172 0.1733054927190516 LSSERPSS(ph)DGEGVVENGITTCNGK ddPTM_A549_PD325901_60min_R1 3 LSSERPSSDGEGVVENGITTCNGK 24 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LSSERPS(0.181)S(0.819)DGEGVVENGITTCNGK;LSSERPS(0.113)S(0.887)DGEGVVENGITTCNGK;LSS(0.003)ERPS(0.138)S(0.859)DGEGVVENGITTCNGK 276.37 2.9801999999999993e-140 259654000.0 23677.300000000003 24564.399999999998 25984.6 21940.0 27817.0 24863.5 23466.899999999998 25416.8 23486.100000000002 26463.600000000002 30402.2 True False 26081.002065693014 26634.528196769297 27748.071214093376 23295.18397064473 25863.22988344035 24661.019899467166 24359.9457210804 24909.84198490612 22499.060892112804 24792.683779693787 26662.922135424556 0.9781749327108299 0.9989350777641309 1.0406988053731396 0.8736920826729107 0.9700073289820799 0.92491812316034 0.9136262558677165 0.9342502617824743 0.8438332744564552 0.9298562120748964 1.0 14.702547281479104 -6.254660371621551 24.978459007745386 0.9246657689573646 1.0052361525518314 0.4348325058685707 0.041706405725424174 547.4373997302549 2017123.6150739403 0.008041070788404325 0.020733239161755575 5.563391573483887e-07 6.254660371621551 0.08057038359446678 LSSERPSS(ph)DGEGVVENGITTCNGKEQVK ddPTM_A549_PD325901_60min_R1 2 LSSERPSSDGEGVVENGITTCNGKEQVK 28 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LSS(0.002)ERPS(0.251)S(0.747)DGEGVVENGITTCNGKEQVK;LSS(0.001)ERPS(0.172)S(0.825)DGEGVVENGIT(0.001)T(0.001)CNGKEQVK 190.44 2.5093999999999998e-67 36351000.0 6080.5 6762.299999999999 6753.5 7401.8 7308.3 8079.5 8199.4 8931.4 7137.1 8196.2 9197.8 True False 6697.787883772482 7332.1827532939105 7211.833122094613 7858.992375292538 6794.990220266276 8013.703230749687 8511.43265388384 8753.25622045225 6837.152506933816 7678.690533227758 8066.5289096581155 0.8303184627223205 0.9089637978629238 0.8940441673071835 0.9742718910835251 0.8423685449302218 0.9934512502837273 1.0551542986095341 1.0851329386512096 0.8475953639424315 0.9519200413493845 1.0 12.97773228875997 -4.557068906257877 0.7140392058897563 0.9491152284927792 0.5998755676334301 0.2300487633308005 0.07250465702019945 10.27756435988969 1.8006230322640477 0.013737410894520026 3.667630068998521 2.772880117594816e-05 4.557068906257877 -0.3492396608593491 LSSGDPSTSPSLSQT(ph)TPSKDTDDQSRK ddPTM_A549_MK2206_60min_R1 1 LSSGDPSTSPSLSQTTPSKDTDDQSRK 27 2 Q99504-2;Q99504-4;Q99504-5;Q99504-3;Q99504 Q99504-2 EYA3 Eyes absent homolog 3 1 LS(0.001)S(0.001)GDPS(0.005)T(0.006)S(0.007)PS(0.035)LS(0.074)QT(0.378)T(0.378)PS(0.095)KDT(0.021)DDQSRK 59.971000000000004 0.00025284 2841900.0 736.53 855.17 774.67 487.64 956.14 957.76 817.85 704.3 1183.7 934.92 1087.5 True False 860.8382575703686 898.6945002736023 884.5298546254895 607.1118218909912 815.4930725909991 1059.1095274903657 966.4427585781276 804.1366818282893 915.5938399804805 723.7209226698602 817.4437365268885 1.0530856364841112 1.0993961542747 1.08206817802976 0.7426955455924779 0.9976137025109797 1.2956359932369828 1.1822743454911016 0.9837211368758693 1.1200695522735387 0.8853464652439166 1.0 9.674975625184198 -7.043425880035526 24.99960569779303 1.0801078237449255 0.9908440379565627 0.08624691447478727 0.13405699937744342 858.8699088021399 494436.7384827213 0.018872010668026504 0.032688850628828994 9.048448521926736e-08 7.043425880035526 -0.0892637857883628 LSSGDPSTSPSLSQTT(ph)PSKDTDDQSR ddPTM_A549_MK2206_60min_R1 1 LSSGDPSTSPSLSQTTPSKDTDDQSR 26 1 Q99504-2;Q99504-4;Q99504-5;Q99504-3;Q99504 Q99504-2 EYA3 Eyes absent homolog 3 1 LSSGDPSTSPSLSQT(0.148)T(0.849)PS(0.002)KDTDDQSR 182.97 1.6902000000000002e-57 17258000.0 2338.2 2668.5 2962.4 2263.4 3443.1 2809.8 2230.0 2786.5 3469.4 3979.8 3553.2 True False 2732.8309964984933 2804.3152519149494 3382.512865274957 2817.933101607888 2936.624551046989 3107.131171005711 2635.1621344124515 3181.494908298353 2683.5864394933496 3080.7604159088605 2670.84237666882 1.0232093890568668 1.0499740742516606 1.2664591871174968 1.0550727838617437 1.0995124896549167 1.1633525056169909 0.9866408281641575 1.1911953083006115 1.0047715518279383 1.153478933396027 1.0 11.383079120572093 -8.862868609389764 11.904739060253943 1.0021223585307342 1.104225120423955 0.0 0.0884542609829118 0.4046432179898632 44.79521788112412 0.01224946416003142 0.013034926754379738 1.3712965728197845e-09 8.862868609389764 0.10210276189322087 LSSGLVS(ph)PAPSFYSK ddPTM_A549_MK2206_60min_R1 1 LSSGLVSPAPSFYSK 15 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 LSSGLVS(0.845)PAPS(0.151)FY(0.001)S(0.002)K 91.20700000000001 3.0128e-05 5284200.0 1938.5 2098.4 2279.0 2245.0 2650.8 2403.0 2774.0 1906.0 3222.3 2863.6 2977.8 True False 2265.6714082252724 2205.1995970089292 2602.19646906617 2795.0251007818806 2260.870831493525 2657.2838650176973 3277.999892762396 2176.1813368801927 2492.4541949557342 2216.7107711434273 2238.330076900938 1.0122150578265874 0.9851985727065423 1.1625615435007781 1.248709977865155 1.0100703443273191 1.187172478465204 1.4644845845528398 0.9722343274291374 1.113532905927191 0.9903413236588219 1.0 11.12820708469166 -10.125758447557205 0.7600971850752962 1.0061328770771267 1.1344685123126246 0.1237456506340161 0.13646683462228296 1.0857507212271031 1.2309714832644552 0.07189906929273454 0.028179767789569946 7.485857444325342e-11 10.125758447557205 0.12833563523549785 LSSGLVS(ph)PAPSFYSK ddPTM_A549_PD325901_60min_R1 2 LSSGLVSPAPSFYSK 15 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 LSS(0.009)GLVS(0.99)PAPS(0.001)FYSK;LSSGLVS(0.999)PAPS(0.001)FYSK 162.79 7.7929e-20 15971700.0 8737.3 8728.8 8922.400000000001 8395.8 10367.4 7510.8 8753.5 9206.9 9214.7 9232.6 8902.4 True False 9624.304263939692 9464.40660972626 9527.927718749828 8914.389497754744 9639.229589588358 7449.6345349978 9086.619232598996 9023.261156826678 8827.438203982432 8649.652060354629 7807.461236963234 1.2327059938991296 1.2122258852747767 1.2203618346052503 1.141778258923775 1.2346176685390247 0.9541686226668206 1.1638378926019874 1.1557228249955855 1.1306413104160251 1.1078699974076298 1.0 12.930637786131152 -14.99999999998921 0.029265518189464695 1.522940409183704e-09 1.842213400651462 0.33244611123783474 0.07193818536199949 629.822437302393 1.4260439419031 68.50796567988107 29.099357422272007 1.0000000000248439e-15 14.99999999998921 1.8422133991285217 LSSLPFQK ddPTM_A549_PD325901_60min_R1 2 LSSLPFQK 8 0 H3BRV9;P61970 H3BRV9 NUTF2 Nuclear transport factor 2 0 ; 103.92 0.005823600000000001 3720900.0 4463.6 4880.5 3808.8 4745.200000000001 5660.799999999999 5110.0 4866.4 5151.4 5398.7 5755.700000000001 5987.6 False True 4916.741386071353 5291.796863116243 4067.2880721750157 5038.300226868887 5263.204936699828 5068.385854215098 5051.593514996261 5048.65128580488 5171.8114134849675 5392.284119726092 5251.163158523658 0.9363147244988049 1.0077380388622335 0.7745499329178178 0.9594636606731114 1.0022931639738948 0.9651929870029126 0.9619951546918787 0.9614348542208097 0.984888729859805 1.0268742289931265 1.0 12.358421306901475 -6.511481642587029 24.953702449693296 0.9861319564870018 0.9081299801218911 0.2931860408228939 0.054193032373985844 477.11832061910576 1044638.7191003801 0.007009595185071331 0.015454086339228273 3.079770519127855e-07 6.511481642587029 -0.07800197636511075 LSSLRAS(ph)TSK ddPTM_A549_MK2206_60min_R1 4 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 LSSLRAS(0.467)T(0.467)S(0.065)K;LS(0.007)S(0.006)LRAS(0.849)T(0.1)S(0.037)K;LS(0.001)S(0.001)LRAS(0.458)T(0.458)S(0.083)K;LS(0.002)S(0.001)LRAS(0.958)T(0.032)S(0.007)K 84.89200000000001 0.00024339 134343700.0 18211.0 20811.5 18378.399999999998 15334.3 19587.6 13305.800000000001 16171.2 12576.100000000002 18998.6 18122.8 18044.9 True False 21284.57158379697 21870.716456896378 20984.73347392966 19091.204188382886 16706.28998753681 14713.810924324787 19109.297716596713 14358.800687690979 14695.447434529997 14028.846893168762 13563.853316095689 1.5692127515519068 1.6124264946851985 1.5471070782686736 1.4075059456539616 1.2316772821269097 1.0847810413036898 1.4088398975769272 1.058607782985382 1.083427186365359 1.0342818199398607 1.0 13.7274794673382 -6.3514789130993705 0.3690277867677547 1.0106904353231514 1.8392830663599984 0.8231697414314068 0.09530898649441764 0.7967601706301596 0.12626223266541026 0.029487957279360055 0.2597464428693586 4.451650771110498e-07 6.3514789130993705 0.828592631036847 LSSLRAS(ph)TSK ddPTM_A549_PD325901_60min_R1 5 LSSLRASTSK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 LSSLRAS(0.462)T(0.462)S(0.075)K;LS(0.009)S(0.045)LRAS(0.911)T(0.03)S(0.006)K;LSSLRAS(0.795)T(0.102)S(0.102)K;LSSLRAS(0.491)T(0.491)S(0.019)K;LS(0.001)S(0.001)LRAS(0.769)T(0.217)S(0.013)K 105.66 8.737799999999999e-05 181813700.0 36588.1 29799.1 28001.1 27108.799999999996 37623.600000000006 34416.2 28497.199999999997 29124.2 32906.200000000004 28846.899999999998 32276.0 True False 40302.49697726438 32310.374736950558 29901.423030292946 28783.249007448205 34981.04813037375 34135.92587785472 29581.67654026617 28543.294983507094 31523.266848392966 27025.50181095723 28306.256614421432 1.423801724341435 1.1414569993154486 1.0563538456391586 1.0168511293995601 1.2358062249937936 1.205949848573873 1.0450578804261577 1.0083740627492543 1.1136501473081586 0.9547536496644461 1.0 14.788833350944444 -5.267057490099077 2.734732066634661 1.071207037431577 1.488969033381743 0.6057789657704945 0.08182126035674415 0.22515247241406447 2.26036308575035 0.011335317507961296 0.20994532679758618 5.406827448727817e-06 5.267057490099077 0.41776199595016594 LSSLRAS(ph)TSKSESSQK ddPTM_A549_MK2206_60min_R1 1 LSSLRASTSKSESSQK 16 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 LSSLRAS(0.874)T(0.053)S(0.053)KS(0.019)ESSQK 70.837 0.00026583 17126000.0 3688.4 4208.2 5124.8 3810.2 4997.8 3256.9 3466.1 2485.6 5562.4 4860.5 5098.2 True False 4310.911747277841 4422.379405324523 5851.573701040068 4743.699171046379 4262.630240545628 3601.542996244753 4095.8455040748872 2837.941411830751 4302.525281327553 3762.509674236142 3832.176236838055 1.1249252333015853 1.1540125328300264 1.5269584015447646 1.237860389990943 1.1123262546147257 0.9398166403788364 1.0688040556961407 0.7405560800022988 1.1227367989937709 0.9818206266370998 1.0 11.903948194944359 -6.8542486602120904 3.364859730888098 1.02646724447216 1.2742415347554288 0.46687728838544873 0.13652189397443146 0.18775165831487725 4.212021541087404 0.02024630267602176 0.04076325396712668 1.3987862024062158e-07 6.8542486602120904 0.2477742902832687 LSSLRAS(ph)TSKSESSQK ddPTM_A549_PD325901_60min_R1 2 LSSLRASTSKSESSQK 16 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 LS(0.005)S(0.004)LRAS(0.642)T(0.279)S(0.065)KS(0.005)ESSQK;LS(0.046)S(0.042)LRAS(0.851)T(0.04)S(0.011)KS(0.008)ES(0.001)S(0.002)QK 90.96799999999999 2.0587e-06 54764000.0 7952.799999999999 8576.9 6947.5 8674.3 9226.599999999999 13444.800000000001 8266.0 10500.8 9256.6 9915.0 9096.2 True False 8760.16240145807 9299.70546363317 7418.999128711382 9210.091810235353 8578.555446042012 13335.31000640923 8580.56715332876 10291.353306281759 8867.577292693606 9288.965207895515 7977.425065562649 1.098119045865361 1.1657527820322133 0.9299992250304038 1.1545193761824153 1.0753539363314553 1.6716308704641762 1.0756061113466029 1.2900595394757128 1.1115839033040387 1.1644064508978704 1.0 12.96170743654663 -9.552819229385072 1.2125304022645764 1.0248982143814875 1.1800740772371983 0.0218474018907181 0.1832598664780705 0.6366959777257478 1.9284711617538615 0.0461651153266206 0.034369299509402026 2.800146609347154e-10 9.552819229385072 0.15517586285571072 LSSNLGGPGSSRT(ph)PPTGR ddPTM_A549_PD325901_60min_R1 1 LSSNLGGPGSSRTPPTGR 18 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 LSSNLGGPGS(0.116)S(0.127)RT(0.737)PPT(0.02)GR 49.73 0.007394199999999999 10896000.0 3358.9 3964.9 3692.5 2964.1 5353.6 3487.6 3817.0 4114.0 4099.1 4356.3 4458.5 True False 3699.893055308512 4299.036037817762 3943.095254806299 3147.185725040478 4977.58160491736 3459.1981419100953 3962.2580237425464 4031.943042629434 3926.8290820042307 4081.2424745491926 3910.13276476013 0.9462320790367036 1.0994603755050474 1.0084300181168377 0.8048795052189345 1.2729955488410925 0.8846753678253434 1.013330815631682 1.0311524659641005 1.0042700128738786 1.0437605882161292 1.0 11.933001878335187 -8.98465297168089 21.956645847686172 1.001883774545996 1.0094581899434854 0.0 0.11330448803224727 419.6745391598488 600455.7997140111 0.018266368700770388 0.01846323558778884 1.0359696402494162e-09 8.98465297168089 0.007574415397489265 LSSPAAFLPACNS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 LSSPAAFLPACNSPSK 16 0 Q86YS7;Q86YS7-3;H0YFE9;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 LSSPAAFLPACNS(0.987)PS(0.013)K;LSSPAAFLPACNS(0.59)PS(0.41)K 145.55 2.2021e-14 11119400.0 3783.4 3960.1 4206.7 3440.0 4505.4 4314.5 3904.6 4138.2 5184.9 4748.4 5042.9 True False 4421.945424750834 4161.652175045305 4803.273315673833 4282.800154427467 3842.6616282672917 4771.05752626669 4614.015278038952 4724.802522705992 4010.5284285839252 3675.7331420929745 3790.608753040413 1.1665528448970186 1.097884916692413 1.2671509059913322 1.1298449493085434 1.013732062214315 1.2586520627959474 1.217222767804272 1.2464495363485535 1.0580169808786297 0.96969468008132 1.0 11.888213841361317 -8.918251909417837 5.540308103035794 1.0250220521116147 1.172407088484811 0.49797569855308754 0.07406374643895525 0.13677026533270492 6.8376843689737825 0.012984182245452064 0.013687238296370951 1.2071134544481226e-09 8.918251909417837 0.14738503637319633 LSSPAAFLPACNS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 LSSPAAFLPACNSPSK 16 0 Q86YS7;Q86YS7-3;H0YFE9;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 LSSPAAFLPACNS(0.873)PS(0.127)K;LSSPAAFLPACNS(0.988)PS(0.012)K 145.55 2.2021e-14 21344000.0 4756.4 5512.1 5242.3 4139.2 5571.2 4753.9 4520.5 5451.0 4574.4 3887.8 4949.5 True False 5239.266226523383 5976.624011716635 5598.074002510785 4394.868983194745 5179.89813159661 4715.185814550518 4692.530101212516 5342.275528773226 4382.1538759045025 3642.3236445039024 4340.742877465575 1.2069975979739276 1.3768666286924143 1.289658051752498 1.0124693185606914 1.193320654509947 1.0862624089136488 1.0810430918572027 1.230728398244223 1.0095400717360865 0.8391014504481644 1.0 12.08372625219837 -5.443703793993691 0.23432130278282093 0.9758367807141108 1.5595768614559031 0.53759815174068 0.10037805977964508 5.261533736898396 0.24608276408147553 0.06282972723105391 0.8883343144772093 3.5999478211760903e-06 5.443703793993691 0.5837400807417923 LSSPVLHR ddPTM_A549_PD325901_60min_R1 1 LSSPVLHR 8 0 Q16643;Q16643-3;Q16643-2;D6R9W4;D6RCR4 Q16643 DBN1 Drebrin 0 80.229 0.004243 969420.0 0.0 0.0 137.54 107.2 196.42 0.0 0.0 0.0 0.0 0.0 160.4 False True 0.0 0.0 146.87429149520884 113.82150053113564 182.62413681221383 0.0 0.0 0.0 0.0 0.0 140.67181685937524 0.0 0.0 1.0440918072596872 0.8091279623189844 1.298228322413557 0.0 0.0 0.0 0.0 0.0 1.0 7.136189508043833 -11.002762449802177 1.322050669104201 0.9952183796549599 0.33137332935577957 0.0 0.544660511636484 0.5918041513717125 1.8628960846064782 0.34417614190294343 0.08084666850013969 9.936594111751904e-12 11.002762449802177 -0.6638450502991803 LSSQIS(ph)AGEEK ddPTM_A549_MK2206_60min_R1 2 LSSQISAGEEK 11 0 E5RJU9;Q86UE4;H0YB56 E5RJU9 MTDH Protein LYRIC 1 LS(0.002)S(0.048)QIS(0.95)AGEEK;LS(0.001)S(0.107)QIS(0.892)AGEEK 110.14 8.9085e-05 38761000.0 15241.6 19405.0 15416.6 15647.0 18438.2 17551.6 12968.5 17870.6 23870.0 21508.7 22621.0 True False 17814.00945865684 20392.631614543603 17602.905697676833 19480.515702420533 15725.965204935843 19408.89866219084 15324.708583016987 20403.812276417204 18463.483112557282 16649.869731559087 17003.581392160686 1.0476621982043026 1.1993139059483904 1.0352469454342401 1.1456713296530465 0.92486193597933 1.1414594498979551 0.9012635767475595 1.1999714534153467 1.0858584839703045 0.9791978141284592 1.0 14.053551026649776 -10.676678027939914 1.0000989838650494 1.0010346931259553 1.075983452800359 0.10722478035691962 0.09362287752108264 1.0470574660066696 1.904479843384696 0.05360042212938237 0.015047794812900807 2.1053386922086813e-11 10.676678027939914 0.07494875967440362 LSSQIS(ph)AGEEK ddPTM_A549_PD325901_60min_R1 2 LSSQISAGEEK 11 0 E5RJU9;Q86UE4;H0YB56 E5RJU9 MTDH Protein LYRIC 1 LSSQIS(1)AGEEK;LSSQIS(1)AGEEK 145.71 2.1227e-13 6855400.0 5021.6 5811.1 6077.6 6592.0 7083.6 6335.7 5685.7 5425.6 6430.7 6195.2 6690.8 True False 5531.389135293466 6300.821791057221 6490.062483577729 6999.172868481774 6586.07237309336 6284.104159794642 5902.072424834421 5317.382151699138 6160.440042361636 5804.034014720556 5867.874016475734 0.9426564237341344 1.0737827317638147 1.106033030933354 1.1927953546428562 1.1223949857480033 1.070933721847167 1.0058280747443906 0.9061854662811553 1.0498589480729204 0.9891204205175624 1.0 12.518622181277202 -7.650037951547967 4.388502293944065 1.0123337268924144 1.0938052726874528 0.31560403423185834 0.0657083689861067 0.24462108945676664 8.303161691645963 0.010505423250749999 0.015715325550070033 2.2385255127337752e-08 7.650037951547967 0.08147154579503835 LSSQISAGEEKWNSVS(ph)PASAGK ddPTM_A549_PD325901_60min_R1 1 LSSQISAGEEKWNSVSPASAGK 22 1 E5RJU9;Q86UE4;H0YB56 E5RJU9 MTDH Protein LYRIC 1 LSSQISAGEEKWNS(0.192)VS(0.801)PAS(0.006)AGK 71.97399999999999 9.989200000000001e-05 3370600.0 2226.9 2342.2 2439.4 2579.1 2851.3 3456.1 2772.0 3537.2 2559.2 3223.2 3010.0 True False 2452.9732486428657 2539.585413951613 2604.9523533038555 2738.405149438917 2651.034524451001 3427.954667466302 2877.489976896604 3466.6477711202792 2451.6457238577323 3019.6866019252457 2639.789081962093 0.9292307727932675 0.9620410324843072 0.9868032151143136 1.0373575556284689 1.0042599776496346 1.2985714240921036 1.090045411793973 1.3132290737953964 0.928727882318341 1.143912073339126 1.0 11.36620694812334 -3.7946056860692847 15.38040853943261 1.0187342425450276 0.34879793015344196 0.0 0.13719390939575404 0.0 0.0 0.01829273890113216 0.0 0.00016047017045444202 3.7946056860692847 -0.6699363123915857 LSSS(ph)ASR ddPTM_A549_MK2206_60min_R1 2 LSSSASR 7 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 LSS(0.002)S(0.998)ASR;LSS(0.003)S(0.997)ASR 121.67 0.0064759 69461000.0 8436.6 6897.1 5259.0 5118.5 9998.2 10127.6 11275.5 11404.1 11109.4 11111.4 11695.2 True False 9860.49182493337 7248.132930104025 6004.805278990345 6372.532729778193 8527.478024535452 11199.29590984321 13324.112397563948 13020.666098591506 8593.138638066353 8601.327022797546 8790.959068900474 1.1216628069417989 0.8244985414328158 0.6830660035983303 0.7248961893500472 0.9700281798265753 1.2739560976301936 1.5156608389521777 1.4811428419288568 0.9774972867825145 0.9784287420045232 1.0 13.101804852586854 -6.992954940178949 9.325682510999293 1.0929765140985288 0.828775459519524 0.3298183902492252 0.21637877070822184 0.18816721407973216 173.47676708459272 0.036536188938250225 0.06791482296524438 1.0163541382810953e-07 6.992954940178949 -0.2642010545790048 LSSS(ph)ASR ddPTM_A549_PD325901_60min_R1 2 LSSSASR 7 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 LSS(0.004)S(0.988)AS(0.008)R;LSS(0.004)S(0.996)ASR 107.0 0.0038345 38835000.0 7876.0 7152.2 5439.0 5813.0 6195.3 5886.2 5196.3 5061.5 5938.9 6704.7 8496.6 True False 8675.565721995239 7754.940994648086 5808.123247363974 6172.055807719136 5760.163500624723 5838.264738763392 5394.048040024469 4960.544411830066 5689.3086860810745 6281.364097768736 7451.572064385091 1.1642597893483773 1.0407120709082252 0.779449382919343 0.8282890850936779 0.7730131911567383 0.7834943671373016 0.7238805440539733 0.665704413641662 0.76350448427832 0.8429582433739878 1.0 12.863329108925956 -5.598107610302912 3.922417678709069 0.8365087116030685 1.142604661619396 0.6290314186902781 0.08822657606449444 0.14739428412425476 4.282920356934413 0.016928766649614627 0.07968270335008035 2.522855577131535e-06 5.598107610302912 0.3060959500163274 LSSS(ph)ASREPYK ddPTM_A549_PD325901_60min_R1 1 LSSSASREPYK 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 LS(0.005)S(0.228)S(0.766)AS(0.001)REPYK 116.19 5.4808e-06 38798000.0 5660.0 5637.4 6023.9 6135.8 5657.6 6888.5 6628.2 6481.5 6826.2 6100.1 7614.0 True False 6234.599033328221 6112.483482457018 6432.718078653399 6514.794430587144 5260.229693660431 6832.402339874892 6880.4397780902145 6352.221397861611 6539.318552749942 5714.938644950423 6677.526269122712 0.9336689639331539 0.9153814206200153 0.9633384908418375 0.9756299216241126 0.7877512542307851 1.0231936295733253 1.0303875268759013 0.9512836253800557 0.9793025574437871 0.8558466735468563 1.0 12.705098031038537 LSSS(ph)KENLDASK ddPTM_A549_PD325901_60min_R1 1 LSSSKENLDASK 12 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 LS(0.003)S(0.163)S(0.834)KENLDASK 115.82 2.1176e-05 3922200.0 2019.7 1875.4 2210.2 1648.0 2292.6 2085.9 2029.0 2143.0 1780.1 2141.5 1873.7 True False 2224.738457175443 2033.4465397168722 2360.1974630122904 1749.7932171204434 2131.575685040635 2068.913121977942 2106.214705311403 2100.2561838490233 1705.2885874644985 2006.2853245293234 1643.2467783629133 1.3538675301051504 1.237456580771572 1.4363012872379644 1.064838976202757 1.297173201924193 1.2590398163075052 1.2817397441726446 1.278113678057173 1.0377556249727715 1.2209275873512362 1.0 10.682333441265065 -8.781822226805033 5.44802799375808 1.0167768006231412 1.27392447321133 0.34758626586225017 0.10479640218250223 0.07175314988490394 6.051970687620181 0.013687816084036743 0.014802172622406342 1.6526381472348947e-09 8.781822226805033 0.2571476725881887 LSSS(ph)LDNKEK ddPTM_A549_PD325901_60min_R1 1 LSSSLDNKEK 10 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LS(0.018)S(0.157)S(0.825)LDNKEK 88.18700000000001 0.00019771 22530000.0 3486.2 3056.3 3382.6 2911.4 3909.2 3228.0 3361.8 3140.3 3710.3 3681.1 3842.3 True False 3840.116457595201 3313.865127085783 3612.163577226213 3091.230565730861 3634.631278007873 3201.7122382399907 3489.735138647547 3077.6642529823066 3554.3689939158116 3448.674717779542 3369.721458346495 1.1395946237881414 0.9834240509338358 1.0719472282432159 0.9173549220438273 1.0786147528619079 0.9501415110467482 1.0356153117652467 0.9133289771946018 1.0547960826589868 1.0234302034779423 1.0 11.718413627621075 -5.253082858719492 24.284052936625077 1.0125720694225453 1.1395947199249943 0.3198305026504762 0.05570991426906384 626.849799717346 1821563.7501421275 0.006892321855607245 0.10646403814554917 5.583636547895918e-06 5.253082858719492 0.12702265050244899 LSSS(ph)LGR ddPTM_A549_MK2206_60min_R1 2 LSSSLGR 7 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 LS(0.001)S(0.012)S(0.987)LGR;LSS(0.002)S(0.998)LGR 137.62 0.005510800000000001 195855000.0 14083.9 13833.400000000001 13057.2 12237.900000000001 17460.1 13374.3 14031.7 13454.2 20387.5 20580.5 19187.8 True False 16460.918001704355 14537.460972771316 14908.907299644938 15236.186049380209 14891.742419254604 14789.559548858166 16581.07826073328 15361.37405175945 15769.763802147532 15931.350756221984 14422.939703660351 1.1413011729867242 1.0079402168672937 1.0336940738829585 1.056385616415873 1.0325039641866682 1.0254192177690913 1.1496323635413397 1.0650654004925872 1.0933806925744392 1.1045841613120533 1.0 13.8160776262121 -10.93658641404821 1.2078801954137444 1.000174190528096 1.0668675149145397 0.0 0.05302945727129006 0.542244415086175 1.411810106766095 0.02968597363081206 0.007043008042899005 1.1572137517674838e-11 10.93658641404821 0.0666933243864436 LSSS(ph)LGR ddPTM_A549_PD325901_60min_R1 2 LSSSLGR 7 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 LSS(0.001)S(0.999)LGR;LSS(0.008)S(0.992)LGR 155.88 0.001857 292460000.0 15886.3 14787.5 14996.8 15210.2 16471.9 16708.8 16508.1 16573.6 17621.6 17642.8 18306.0 True False 17499.06548112406 16033.694521735755 16014.573031084385 16149.699509129478 15314.970568970097 16572.729072584978 17136.324779078936 16243.026546262323 16881.025432764687 16528.830597060914 16054.478051295031 1.089980342257997 0.9987054372311033 0.9975143994041321 1.0059311462839344 0.9539376191513569 1.0322807767175055 1.0673859794337341 1.0117442930480125 1.051483914882115 1.0295464321076213 1.0 13.970688141776087 LSSS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 LSSSPPR 7 0 Q9Y2K6;O95231 Q9Y2K6 USP20;VENTX Ubiquitin carboxyl-terminal hydrolase 20;Homeobox protein VENTX 1 LS(0.034)S(0.233)S(0.733)PPR 47.574 0.059147000000000005 3904300.0 715.1 810.32 686.72 722.86 1004.7 790.53 875.48 642.01 1267.5 1146.6 1184.7 True False 835.7913974835654 851.5618268434405 784.1072221312506 899.9607324504185 856.9099609180419 874.1833598886562 1034.5433836033242 733.016883573165 980.413273781582 887.5822636517155 890.5062939433609 0.9385575409944542 0.9562670501435026 0.8805184505311564 1.0106169249688188 0.9622727730799667 0.9816700520078044 1.1617474133979837 0.8231462130685259 1.1009616444596848 0.9967164406231234 1.0 9.798481997854887 -6.9803558423586125 1.004182971435007 1.037094630983434 0.930810428498191 0.09481451874023294 0.08426228340240172 0.6359142854697676 1.2472837119152198 0.01356435445033881 0.03750940848204835 1.0462709270171405e-07 6.9803558423586125 -0.10628420248524295 LSSS(ph)SATLLNS(ph)PDR ddPTM_A549_PD325901_60min_R1 1 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 2 LS(0.015)S(0.091)S(0.892)S(0.003)ATLLNS(1)PDR 122.56 1.7921000000000002e-06 5803800.0 3568.8 3518.2 2915.5 3494.8 4145.5 3684.5 3070.6 4117.9 4179.5 4020.1 4254.8 True False 3931.1019487882954 3814.691061123973 3113.3633623257338 3710.6658587333286 3854.3343811986174 3654.4946535920803 3187.4533632967905 4035.7652540699432 4003.850149602762 3766.270199925444 3731.486573399438 1.0534948663119548 1.0222979464317714 0.834349340694375 0.9944202627407175 1.0329219482323537 0.9793669578349261 0.8542046984757001 1.0815435550109196 1.0729906354601182 1.0093216539418814 1.0 11.86553477970305 LSSS(ph)SATLLNSPDR ddPTM_A549_MK2206_60min_R1 1 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSS(0.008)S(0.832)S(0.159)AT(0.001)LLNSPDR 231.32 1.9547999999999995e-47 39930000.0 4274.5 4580.3 3556.3 3129.7 4615.0 4037.9 3648.8 3358.6 5226.2 6311.8 5798.0 True False 4995.931098508604 4813.417705956924 4060.636815682326 3896.4766404975708 3936.1396134535353 4465.187897858909 4311.739729167782 3834.691835281123 4042.47404452647 4885.959996264516 4358.196583340601 1.1463299103133098 1.1044517184829215 0.9317241060681589 0.89405710962925 0.9031578861081215 1.0245494466512335 0.9893403490906301 0.8798804188731187 0.9275566090751862 1.1210967433046306 1.0 12.089515557622143 -5.6927230254928425 5.005577658090753 0.9542488429942698 1.134089686678062 0.4619573453715585 0.06711585939970541 0.09071119894062381 4.215644347332766 0.006855921476272156 0.02782207742190213 2.028976301574255e-06 5.6927230254928425 0.17984084368379227 LSSS(ph)SATLLNSPDR ddPTM_A549_PD325901_60min_R1 2 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSS(0.049)S(0.949)S(0.002)ATLLNSPDR;LSS(0.018)S(0.978)S(0.001)AT(0.002)LLNSPDR 298.75 4.738599999999999e-117 132800000.0 15438.5 15058.0 16055.7 16282.6 17474.300000000003 15827.400000000001 15072.2 17048.0 18183.6 17697.699999999997 18453.7 True False 17005.80515477699 16326.990506055594 17145.336352767376 17288.33922153235 16246.965451062368 15698.50690195774 15645.780818824303 16707.96426610272 17419.406527172334 16580.264201691625 16184.011887642471 1.0507780933948776 1.0088345596509538 1.059399639088188 1.0682356971532567 1.0038898614173637 0.970000949761076 0.9667430379713734 1.0323746906575322 1.076334264217463 1.0244841833285923 1.0 13.98228166426148 -4.583967373630421 6.031442945246501 1.0282037690328716 8.348094360429378 0.02045429674928123 0.035484828879412324 66920.56338588949 4508.811026230226 0.005662352674813281 6750509.607540135 2.6063493446185338e-05 4.583967373630421 7.319890591396507 LSSS(ph)SSNDSGNK ddPTM_A549_MK2206_60min_R1 1 LSSSSSNDSGNK 12 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LSS(0.139)S(0.412)S(0.412)S(0.036)NDSGNK 174.72 6.9127e-16 7009900.0 2920.6 2780.9 2762.1 1821.5 4727.1 4215.0 3164.4 4231.4 4556.7 4626.9 4866.2 True False 3413.5258781855696 2922.435931815734 3153.80731338643 2267.7675817702425 4031.7498519515057 4661.028502309442 3739.330519342946 4831.213908119022 3524.614725554661 3581.6800764783884 3657.788239712319 0.9332212950780441 0.7989625807440346 0.8622170302659384 0.6199832885756666 1.102237086384366 1.2742751074829928 1.0222927830390314 1.320801968705272 0.9635917922443396 0.9791928459915666 1.0 11.836755840240778 -6.782434198466097 24.998717146821708 1.0407854547228852 0.8074522273633076 0.4908872737302511 0.13567835099694375 189.78639694492696 225979.9582211827 0.020752072462406193 0.039246090010830265 1.65031102699468e-07 6.782434198466097 -0.23333322735957762 LSSS(ph)TVAISYSPDR ddPTM_A549_MK2206_60min_R1 1 LSSSTVAISYSPDR 14 0 Q96T17-2;Q96T17;Q96T17-5 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 LS(0.009)S(0.186)S(0.769)T(0.036)VAISYSPDR 82.529 0.00037279 6599000.0 2019.1 2482.2 2114.5 2242.0 2970.6 1871.3 2216.0 2098.3 3740.0 2888.6 3053.0 True False 2359.8747177444666 2608.533377666586 2414.367895498209 2791.290100647203 2533.628675130026 2069.319723931592 2618.6185156313886 2395.7404507742463 2892.8959715527544 2236.063253780171 2294.85584148652 1.0283324447150588 1.1366872508980248 1.0520782403195632 1.216324812298062 1.1040469860140922 0.9017210085802886 1.1410819225730306 1.0439611968054503 1.260600304060427 0.974380705470255 1.0 11.164187813767525 LSSS(ph)TVAISYSPDR ddPTM_A549_PD325901_60min_R1 2 LSSSTVAISYSPDR 14 0 Q96T17-2;Q96T17;Q96T17-5 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 LSS(0.061)S(0.879)T(0.061)VAISYSPDR;LSS(0.002)S(0.997)T(0.001)VAISYSPDR 273.07 3.2911999999999996e-84 28344000.0 7044.5 8309.7 8413.099999999999 9773.400000000001 9234.7 10083.3 8229.9 10228.5 9136.5 10352.099999999999 9094.2 True False 7759.652454113191 9009.987581894693 8984.06355808013 10377.080720998147 8586.086529985496 10001.184947907457 8543.093348074079 10024.484543396982 8752.524678034606 9698.466639299555 7975.671052883603 0.9729153073969481 1.129683950372694 1.1264335625817896 1.301091864520455 1.0765346856777898 1.2539615640606856 1.0711441446654604 1.2568828976180795 1.097402916945795 1.216006349182753 1.0 12.961390193375133 -9.704024476632707 0.9762227424953656 1.0156346884476755 1.1500664366961109 0.0 0.10942539581263153 0.43555325146054535 0.8615126066552663 0.027239297749508833 0.017275459415138684 1.9768582221726754e-10 9.704024476632707 0.1344317482484354 LSSS(ph)VSAMR ddPTM_A549_MK2206_60min_R1 2 LSSSVSAMR 9 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 LS(0.007)S(0.165)S(0.828)VSAMR;LS(0.001)S(0.079)S(0.919)VSAMR 113.15 0.00024943 9950700.0 3447.9 4046.4 3177.7 3028.5 5160.299999999999 3600.7 3574.0 4142.3 5635.700000000001 5183.200000000001 5872.4 True False 4029.82122693831 4252.344476428203 3628.345642716794 3770.4826359545295 4401.226705808076 3981.7236840487817 4223.349537394666 4729.483710261717 4359.222948363598 4012.3115201112637 4414.121010005062 0.9129385483099133 0.9633502268718561 0.8219859932459426 0.8541865135569099 0.9970788512213962 0.9020422582488774 0.9567815489928816 1.0714440541031505 0.9875630818645362 0.9089718000519117 1.0 12.107910465285771 -7.639448951778316 1.357984776348965 0.9996320493159206 0.9001319869299168 0.29755312375632026 0.05736507493764028 0.2901603069577217 1.0817885574768906 0.00837973776129312 0.014180134836621566 2.2937762316536365e-08 7.639448951778316 -0.09950006238600384 LSSS(ph)VSAMR ddPTM_A549_PD325901_60min_R1 1 LSSSVSAMR 9 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 LS(0.062)S(0.32)S(0.614)VS(0.003)AMR 86.87899999999999 0.0011629000000000001 4888600.0 2059.6 2014.0 2453.2 2314.1 2595.4 2574.5 2371.4 2297.0 2784.0 2986.9 2716.1 True False 2268.6890758026157 2183.7268481336137 2619.688904289997 2457.0367012975826 2413.1080576439253 2553.534125572756 2461.644924679871 2251.1845330383608 2666.9981616207897 2798.306624252457 2382.036918776492 0.9524155809339445 0.9167476922462067 1.099768388827312 1.0314855667978537 1.0130439367343613 1.0719960322379687 1.0334201394092033 0.9450670202855873 1.119629230176107 1.1747536749723333 1.0 11.217980058117265 -5.7503616004684375 24.985445773365264 1.047211368700494 0.9345815849813582 0.36643908352697685 0.060144760433867565 161.17137375010427 363507.5741419874 0.007344983713066004 0.02790951057630254 1.7767994026438262e-06 5.7503616004684375 -0.11262978371913579 LSSSDRYS(ph)DASDDSFSEPR ddPTM_A549_MK2206_60min_R1 1 LSSSDRYSDASDDSFSEPR 19 1 Q9NRF8 Q9NRF8 CTPS2 CTP synthase 2 1 LSSSDRYS(0.996)DAS(0.004)DDSFSEPR 195.24 6.0034e-55 6780400.0 2979.1 2161.4 2396.1 2735.2 2990.0 2260.1 2388.3 2541.1 3542.0 3819.0 3533.9 True False 3481.899247997888 2271.406027914175 2735.903009885673 3405.3241227877916 2550.174960829048 2499.2622818670384 2822.2231953440637 2901.308706792373 2739.742655411726 2956.2852475893073 2656.3350993217236 1.3107906637558515 0.8550901685913658 1.029954018446041 1.2819633048772034 0.9600351105853389 0.9408685984329339 1.062449988356024 1.0922224035413308 1.0313994857468471 1.112918791136018 1.0 11.375221440245557 -5.236614483237152 23.956466805432033 1.0250067993776935 1.3107912822520742 0.3570413070455444 0.10468046938630614 3214.263069972775 3101738.6662581293 0.013082682635290867 1.1470817700744258 5.799432750350024e-06 5.236614483237152 0.28578448287438074 LSSSGAPPADFPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LSSSGAPPADFPSPR 15 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR 130.29 2.7197e-09 23388000.0 7807.099999999999 9327.7 8479.8 8195.1 12041.5 8119.9 8778.6 8230.6 13970.6 13353.5 13219.599999999999 True False 9124.747614730728 9802.440088172034 9682.363149796976 10202.899867892014 10270.211301278601 8979.142428446608 10373.557987961061 9397.312755155363 10806.281406463879 10336.935075591478 9936.808477600785 0.9182774967736796 0.9864777116584625 0.9743936568388762 1.02677835553448 1.0335523044878405 0.9036243828878341 1.0439526948058606 0.9457073441979348 1.087500220098136 1.04026711382157 1.0 13.278566843403082 -8.755712219002707 24.999999215886678 1.0413195484372173 0.9822357006146003 0.266721028587797 0.04666292228443402 152.90931515217355 667474.2626924604 0.008449506282992753 0.009450784836758855 1.7550430787712218e-09 8.755712219002707 -0.059083847822617 LSSSGAPPADFPS(ph)PR ddPTM_A549_PD325901_60min_R1 4 LSSSGAPPADFPSPR 15 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR;LSSSGAPPADFPS(1)PR 140.77 2.0062e-13 49844300.0 11368.5 13674.96 12687.400000000001 13992.0 15663.6 15287.3 13714.800000000001 15338.199999999999 15792.1 14581.68 15942.8 True False 12522.621750952641 14827.396871476285 13548.443259534039 14856.254061862408 14563.442772486473 15162.805297288158 14236.724219026524 15032.26756841488 15128.41295550706 13660.99023627493 13981.936669735964 0.8956285560968086 1.060468032555914 0.9689961826861778 1.0625319233507124 1.041589810945803 1.0844567283807112 1.0182226221809494 1.0751205590104242 1.0819969588513911 0.9770456381657253 1.0 13.77127658506335 -4.504650280640788 1.5984155478861062 1.0426719308605505 4.532028268181199e-17 0.4848764835185386 0.04052790896706402 6.526568222253705 2.5275647609534886 0.005551587720046753 19.101792470074052 3.12859768317799e-05 4.504650280640788 -1.0426719308605505 LSSSGAPPADFPS(ph)PRK ddPTM_A549_PD325901_60min_R1 1 LSSSGAPPADFPSPRK 16 1 Q8NG08 Q8NG08 HELB DNA helicase B 1 LSSSGAPPADFPS(1)PRK 69.148 0.00099864 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LSSSS(ph)PGATVSPSSSDAEYDKLPDADLAR ddPTM_A549_PD325901_60min_R1 2 LSSSSPGATVSPSSSDAEYDKLPDADLAR 29 1 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 LS(0.006)S(0.03)S(0.154)S(0.801)PGAT(0.007)VS(0.002)PSSSDAEYDKLPDADLAR;LS(0.006)S(0.049)S(0.125)S(0.772)PGAT(0.045)VS(0.001)PS(0.001)S(0.001)S(0.001)DAEYDKLPDADLAR 114.52 6.6088999999999996e-21 21169000.0 4471.799999999999 4513.2 4207.2 4687.7 4001.3 3908.2000000000003 3952.8 4242.2 4946.6 4419.4 4736.299999999999 True False 4925.773844034832 4893.543203076777 4492.725891948831 4977.248582460862 3720.2624917356243 3876.372914959579 4103.2259670551575 4157.58599305848 4738.7116042648695 4140.358329780478 4153.765125879418 1.1858575761411083 1.1780981964021706 1.081603257718538 1.1982498845326743 0.8956362189467769 0.9332190909901025 0.9878329281284145 1.0009198563383512 1.1408231955006385 0.9967723750157633 1.0 12.0202039261434 -6.720241411959734 24.99999779380408 1.0367231461798447 1.1565092109919268 0.5062662872620627 0.07182866585587289 147.33827681044247 89407.97304155411 0.0124331938706303 0.025881557801885918 1.904401820836471e-07 6.720241411959734 0.1197860648120821 LSSSSATLLNS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR 177.88 4.39e-23 150179000.0 11719.2 12522.6 11308.2 9378.8 15316.400000000001 12321.5 11618.2 11988.7 18199.9 17083.7 18787.0 True False 13697.114453068656 13159.94685165079 12911.872800129036 11676.606421030334 13063.377849512395 13625.352951650246 13729.07655158329 13688.13493885393 14077.651709268168 13224.480304855068 14121.669405177618 0.9699359233014405 0.9318973893288977 0.9143304824424642 0.8268573697631799 0.9250590333691563 0.9648542647978007 0.9721992604181495 0.9693000555469217 0.9968829679660033 0.9364672069158054 1.0 13.785623027663311 -7.551498956598079 1.6650785297045485 0.9954945038460528 0.9100300940210301 0.33388876816631696 0.03779453718846114 0.20376688958294148 1.1338530726680092 0.005557110529383018 0.00938876432208666 2.8086721206555584e-08 7.551498956598079 -0.08546440982502268 LSSSSATLLNS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR 174.59 9.1909e-23 284520000.0 13896.7 13440.300000000001 14028.599999999999 13381.8 16432.8 13780.0 14420.3 14200.2 16434.0 14869.1 14740.2 True False 15307.482753790171 14572.961249736954 14980.665156824823 14208.363393727144 15278.61681808242 13667.780248744433 14969.072407590942 13916.965871158607 15743.336130774436 13930.262488423525 12927.248845826462 1.1841253259955744 1.1273056953987397 1.1588440305812868 1.0991018710306864 1.181892373257369 1.0572845322117437 1.1579472621062508 1.0765605301743437 1.2178411910015288 1.0775891030302929 1.0 13.65812765556391 -11.014242489488668 1.286819149500209 0.9996714789029428 1.1453464409048764 0.337621490203573 0.050851048010108986 0.2662274189054444 0.7821236372573755 0.03389512762415341 0.007602964023034981 9.677373666294242e-12 11.014242489488668 0.14567496200193353 LSSSSATLLNS(ph)PDRAR ddPTM_A549_MK2206_60min_R1 4 LSSSSATLLNSPDRAR 16 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDRAR;LSSSSATLLNS(1)PDRAR;LSSSSATLLNS(1)PDRAR;LSSSSATLLNS(1)PDRAR 212.72 2.481e-46 203949100.0 10259.599999999999 11063.0 11368.1 10136.6 14567.599999999999 11131.5 10663.5 10118.5 17004.199999999997 17978.8 17023.100000000002 True False 11991.169656862514 11626.059446106454 12980.267520838586 12620.06745504927 12424.725337583035 12309.42794150832 12600.919919420265 11552.828361606633 13152.775850127633 13917.376593181114 12795.794456341038 0.9371180271593228 0.9085844169953109 1.0144166948857272 0.9862668158752201 0.97100069714123 0.961990127577292 0.9847704230022074 0.9028613581614352 1.0278983376143316 1.0876524033475912 1.0 13.64338210274875 -8.802691233944563 24.999996654299373 1.0131742289194419 0.9609350433357314 0.41748848452382736 0.039069064300560466 117.27881966120634 71074.36776221928 0.00561384618909051 0.005976428187404875 1.5751023013972187e-09 8.802691233944563 -0.052239185583710435 LSSSSATLLNS(ph)PDRAR ddPTM_A549_PD325901_60min_R1 4 LSSSSATLLNSPDRAR 16 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDRAR;LSSSSATLLNS(1)PDRAR;LSSSSATLLNS(1)PDRAR;LSSSSATLLNS(1)PDRAR 298.84 3.0507999999999995e-125 388242000.0 13364.599999999999 14891.600000000002 15286.6 14980.2 18335.4 17834.7 17013.6 16662.7 19119.8 15266.3 17782.899999999998 True False 14721.364353501476 16146.567394074751 16324.04060179337 15905.492931497372 17047.584757696088 17689.460116275935 17661.061858199144 16330.349376864733 18316.261296895533 14302.38321263694 15595.716035090923 0.9439364194871127 1.0353206840740363 1.0467002967394181 1.0198629479858083 1.0930940727144818 1.1342512313300661 1.1324303301279093 1.0471048164842742 1.1744418310568931 0.9170712765259422 1.0 13.928862171220171 -4.715208347168396 0.7231061997765157 1.0877116387958359 0.7320071622576942 0.1551287242965138 0.06999927381658756 5.365546034385229 1.1383351688796257 0.01063263034667247 1.8700045711065454 1.9266004297817393e-05 4.715208347168396 -0.35570447653814163 LSSSSPGAT(ph)VS(ph)PSSSDAEYDKLPDADLAR ddPTM_A549_PD325901_60min_R1 1 LSSSSPGATVSPSSSDAEYDKLPDADLAR 29 1 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 2 LS(0.012)S(0.086)S(0.085)S(0.086)PGAT(0.75)VS(0.737)PS(0.082)S(0.081)S(0.08)DAEY(0.001)DKLPDADLAR 73.805 6.4014e-06 19007000.0 1115.4 1213.8 900.94 1174.5 1214.2 1143.0 900.76 1380.1 1051.0 1244.6 1330.9 True False 1228.6345868859194 1316.09118583147 962.0832061923326 1247.0461975169665 1128.9187807626015 1133.6917869604417 935.0389147147848 1352.572822832494 1006.8301249509509 1166.0157435952349 1167.2077372702154 1.0526271782256729 1.1275552275805274 0.8242604769245158 1.0684012431527157 0.9671961080405778 0.9712853597182637 0.8010904013552798 1.1588107066491846 0.8625971991118354 0.9989787647589038 1.0 10.188845636502403 -5.737101273949453 24.99849143718997 0.9477777545137174 1.0900912907339608 0.18476418278128137 0.1009950072816579 244.59721879976834 251230.11341950877 0.012961893149769014 0.05015276056228639 1.83188719133007e-06 5.737101273949453 0.14231353622024345 LSSSTVAIS(ph)YSPDR ddPTM_A549_MK2206_60min_R1 1 LSSSTVAISYSPDR 14 0 Q96T17-2;Q96T17;Q96T17-5 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 LSSSTVAIS(0.755)YS(0.245)PDR 123.02 1.4007e-06 2567600.0 2863.9 3559.9 3148.1 2456.7 3827.7 2814.5 2967.3 3219.7 4216.1 3589.4 4209.8 True False 3347.2563043674795 3741.083704437711 3594.5479176249305 3058.591610285452 3264.650400523528 3112.3285218861038 3506.4200006466704 3676.1023349177135 3261.1600817282274 2778.5520470534325 3164.3904754307077 1.0577886421908413 1.182244648214127 1.1359369033417641 0.9665657996487127 1.0316838032067372 0.9835475571207698 1.1080870164006573 1.161709455094146 1.0305808044389175 0.8780686418528173 1.0 11.62771191930499 -2.000000997195002 0.04551336009192295 0.8372908331609663 1.4644710103578744 0.2555437883833639 0.07581050718266276 599.3995525340501 2.0111851384359034 6.897636009483022 27.146805054836978 0.009999977038762894 2.000000997195002 0.6271801771969081 LSSSTVAISYS(ph)PDR ddPTM_A549_MK2206_60min_R1 1 LSSSTVAISYSPDR 14 0 Q96T17-2;Q96T17;Q96T17-5 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 LSSSTVAIS(0.006)YS(0.994)PDR 153.7 1.5241e-14 3301400.0 2532.6 2435.1 2322.6 2223.0 3095.6 2757.4 2388.9 2232.4 3464.9 3248.0 3546.8 True False 2960.040963874811 2559.036188846952 2651.9796046744586 2767.6350997942623 2640.2413407165245 3049.186237786017 2822.932207577536 2548.8495364382707 2680.105682308327 2514.2745441660322 2666.031673299834 1.1102797440553556 0.9598671367919458 0.9947292191739108 1.0381103598700576 0.9903263217606909 1.1437171839792661 1.0588517142722094 0.9560462322953114 1.005279010429412 0.943077522051354 1.0 11.380478204864353 -8.238158466400142 24.761881967081134 0.9990790180526522 1.039015201632204 0.21840569558399414 0.05398568509844229 1159.1006645290854 1232835.861463325 0.008073255633714443 0.010418852669185479 5.778851488283705e-09 8.238158466400142 0.039936183579551865 LSST(ph)PLPK ddPTM_A549_MK2206_60min_R1 2 LSSTPLPK 8 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 LS(0.002)S(0.015)T(0.983)PLPK;LS(0.02)S(0.157)T(0.823)PLPK 65.305 0.009551100000000002 5209600.0 3523.8999999999996 3499.0 3420.7 2949.9 4231.700000000001 3632.3 3677.0 3082.7 5054.799999999999 4743.5 4336.700000000001 True False 4118.648168916705 3677.0841545626427 3905.8066966804067 3672.625632426042 3609.222535699093 4016.6675750744 4345.063304141068 3519.6821653728093 3909.895870856915 3671.940055496172 3259.777703168884 1.263475164245985 1.1280168432921325 1.1981819167863832 1.1266491051999719 1.107198976234026 1.232190640229771 1.3329323959474784 1.0797307319303608 1.1994363502321157 1.1264387911870857 1.0 11.670557869526196 -10.735897796693207 0.7212511040980744 0.9836714128410669 1.1851275711587328 0.20424749265974662 0.07925211070721261 0.5865273453193822 0.46973361213879544 0.07171336199611328 0.013505432572416059 1.8369705901007737e-11 10.735897796693207 0.20145615831766595 LSST(ph)PLPK ddPTM_A549_PD325901_60min_R1 2 LSSTPLPK 8 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 LS(0.02)S(0.026)T(0.955)PLPK;LS(0.105)S(0.132)T(0.763)PLPK 56.431999999999995 0.019916999999999997 4003400.0 4034.4 4189.700000000001 4360.3 4378.9 4730.6 4623.1 4555.0 4597.200000000001 4663.7 4861.3 5641.9 True False 4443.969318031695 4542.7807227534295 4656.216178613923 4649.374707796545 4398.338975684041 4585.451006383918 4728.34301759164 4505.505239566368 4467.700907453615 4554.356688365352 4947.982066950803 0.8981377171341073 0.9181077581295523 0.9410333577630202 0.9396506787789807 0.8889157066801012 0.9267315330448854 0.9556103788600602 0.9105742863661769 0.9029339328642392 0.9204472907825184 1.0 12.272624556203526 -10.816403422110378 0.9552993729093401 1.0022049978350953 0.9202888730268818 0.0 0.02988908082235097 0.2686240310710864 0.4158250791324301 0.015665065250685277 0.00348884589811016 1.5261477399912132e-11 10.816403422110378 -0.08191612480821353 LSST(ph)PPLSALGR ddPTM_A549_MK2206_60min_R1 1 LSSTPPLSALGR 12 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 LS(0.001)S(0.063)T(0.92)PPLS(0.016)ALGR 72.846 0.0018011 10100000.0 2740.3 3443.2 3366.8 2926.8 5509.2 4215.3 4691.8 4651.9 5881.1 4566.7 5016.3 True False 3202.795646097351 3618.444172903711 3844.262866192182 3643.8661313890434 4698.803977993108 4661.360248110321 5544.239328357105 5311.32107084626 4549.040240186874 3535.0792982891076 3770.6142671630637 0.8494095176983117 0.9596431553382303 1.0195322549088348 0.9663852818683086 1.2461640584435585 1.236233652618473 1.470380934119915 1.4086089678015232 1.2064454006348104 0.9375340588600786 1.0 11.880583855371146 -6.74442771986908 21.567798166090892 1.1714500345376762 0.9545769707448589 0.3947627977970577 0.1526029064005636 53.33083406000404 67611.34398907339 0.02484559665095683 0.05154615073622419 1.8012428924262718e-07 6.74442771986908 -0.21687306379281723 LSST(ph)PPLSALGR ddPTM_A549_PD325901_60min_R1 2 LSSTPPLSALGR 12 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 LS(0.02)S(0.139)T(0.837)PPLS(0.003)ALGR;LS(0.001)S(0.076)T(0.923)PPLSALGR 167.84 1.5486e-15 25866000.0 4098.4 4823.8 4449.1 4992.8 4612.2 4633.4 4654.8 5416.1 5283.700000000001 5090.8 5108.6 True False 4514.466550917382 5230.318555127575 4751.042680611705 5301.193916528486 4288.254983226216 4595.667126598872 4831.940961204294 5308.0716366517445 5061.644463561697 4769.366019198635 4480.274586083567 1.007631667250936 1.1674102679719145 1.0604356026233719 1.1832296915449831 0.9571411083923753 1.025755684902379 1.0784921478279608 1.184764802840309 1.1297621086180647 1.064525382889038 1.0 12.129371439230997 -10.929068057418853 1.2382203013288613 1.0009512937774865 1.0929000795122625 0.0552493563666564 0.07297687814391236 0.6157214434776906 1.7051026894400076 0.046664134834674534 0.011479482527138653 1.1774214477048383e-11 10.929068057418853 0.09194878573477605 LSST(ph)PR ddPTM_A549_PD325901_60min_R1 1 LSSTPR 6 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 1 LS(0.005)S(0.063)T(0.932)PR 70.91199999999999 0.053188 35347000.0 4240.1 4891.2 4353.1 4212.6 4725.5 3810.4 3956.9 4295.8 4094.6 4244.4 5529.1 True False 4670.551830603357 5303.398589667895 4648.527543316807 4472.8027344912525 4393.597182089996 3779.369365734092 4107.481994798763 4210.116899010092 3922.5182013550575 3976.4078596461645 4849.055751852691 0.9631879008235505 1.0936971775673257 0.9586459263828288 0.922406951659056 0.9060727298116387 0.7794031578808098 0.8470684201206403 0.8682343768478064 0.808924129168111 0.8200375625969836 1.0 12.243488125828586 -6.151699796274022 2.3305509059990155 0.890548386323655 1.0282008154368063 0.44787364201023083 0.06650454261276777 0.2897695010307861 3.0256987383553717 0.011910000454170431 0.0398156650274805 7.051803526595649e-07 6.151699796274022 0.13765242911315134 LSSWDQAET(ph)PGHTPSLR ddPTM_A549_MK2206_60min_R1 2 LSSWDQAETPGHTPSLR 17 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LSSWDQAET(1)PGHTPSLR;LSSWDQAET(0.999)PGHTPSLR 124.35 3.311e-10 15576700.0 1891.62 2014.07 2109.7799999999997 2124.57 3047.0 2066.83 1941.9099999999999 2054.89 3518.1 3153.0 3530.3999999999996 True False 2210.8792103312308 2116.5775602114836 2408.978528524099 2645.0897453755715 2598.790336336492 2285.5405787492828 2294.729910509813 2346.1769503366963 2721.2559672512693 2440.7351101463983 2653.704245916807 0.8331294693947373 0.7975936140842418 0.9077795810255564 0.9967537827342703 0.9793066956633131 0.8612642430918935 0.8647270750087018 0.8841139527687398 1.025455632984875 0.9197464690731458 1.0 11.373791876649369 -2.0000000008681598 0.15350632007657436 1.0391115776898094 0.2251562458844798 0.1462581675723823 0.06661345449477343 42.75404650346544 0.40646922686458836 0.11443855047646977 7.860907804563923 0.009999999980009883 2.0000000008681598 -0.8139553318053296 LSSWDQAET(ph)PGHTPSLR ddPTM_A549_PD325901_60min_R1 2 LSSWDQAETPGHTPSLR 17 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LSSWDQAET(1)PGHTPSLR;LSSWDQAET(1)PGHTPSLR 114.46 1.4960000000000002e-09 20588000.0 7619.0 7103.7 7267.6 7702.3 9179.2 7717.299999999999 7054.5 7653.3 8984.2 9133.5 9343.7 True False 8392.47527118865 7702.3537294373145 7760.823039629049 8178.053577807519 8534.484658520898 7654.452867462664 7322.962857870522 7500.648927602295 8606.625317397085 8556.809251267141 8194.484134594422 1.0241615132011024 0.9399436990695369 0.9470789023637743 0.9979949248156404 1.041491388395165 0.9340981984635343 0.8936453762788285 0.9153289950171503 1.0502949515836804 1.0442157322805838 1.0 13.00043741520857 -8.772523083392349 24.999345040070192 1.0237503940022796 0.9611827136535295 0.32686355506728737 0.04421633379940422 212.35487688050225 478965.9634466965 0.008257666514568943 0.00883066541174987 1.6884061158261164e-09 8.772523083392349 -0.06256768034875015 LST(ph)ASEETVQNR ddPTM_A549_MK2206_60min_R1 2 LSTASEETVQNR 12 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 LS(0.235)T(0.765)ASEETVQNR;LS(0.001)T(0.999)ASEETVQNR 165.35 1.8984e-14 12563100.0 1185.17 1426.51 1400.9 1515.94 2317.2 1985.44 1688.33 1806.88 2944.6 2649.5 2751.8 True False 1385.1977213754678 1499.1132658831536 1599.5686851754278 1887.345368053133 1976.3429495762775 2195.5379429715913 1995.0777069024991 2063.0107733379245 2277.6528015599565 2050.9761098423346 2068.4521141836267 0.6696784092205951 0.7247512551069238 0.7733167590426636 0.9124433459742081 0.9554695204323341 1.061440063280422 0.9645269006819204 0.9973693658130202 1.1011387626243874 0.9915511680345622 1.0 11.01433584342949 -6.267098036648264 0.8872250051020327 1.0418451407874283 0.6464202707257046 0.9121438399702663 0.039548203486129585 0.17005860931283562 0.20913532752428504 0.007316789984187346 0.04637670742788986 5.406322680717243e-07 6.267098036648264 -0.39542487006172367 LST(ph)ASEETVQNR ddPTM_A549_PD325901_60min_R1 1 LSTASEETVQNR 12 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 LS(0.111)T(0.889)ASEETVQNR 243.85 7.533399999999999e-51 6209900.0 1318.5 1647.6 1714.1 2015.3 1794.6 1743.8 1511.4 1792.5 1588.5 1678.0 1681.5 True False 1452.3531493716016 1786.4490342527029 1830.4291337206441 2139.7805039216187 1668.5534870339025 1729.5990709550476 1568.9171540698137 1756.7471813109535 1521.7408691575515 1572.0507936307292 1474.6861599067308 0.9848557536224917 1.211409642825759 1.241233005018785 1.451007381839776 1.1314634478833334 1.1728590923132005 1.0638990157533197 1.1912685078851368 1.031908287017352 1.0660239692831703 1.0 10.526192240002858 -8.413802610176894 0.7927418763620188 1.0064547974302978 1.2137205990447266 0.25054989083207235 0.1114984180703325 0.44012391998202605 0.5555626553915414 0.025149978202269475 0.031267783022209374 3.856536000467441e-09 8.413802610176894 0.20726580161442887 LST(ph)LARHHR ddPTM_A549_MK2206_60min_R1 1 LSTLARHHR 9 1 Q5VIY5-2;Q5VIY5 Q5VIY5-2 ZNF468 Zinc finger protein 468 1 LST(1)LARHHR 68.016 0.01788 1040900000.0 8442.1 9795.2 9344.4 7602.7 11407.0 9557.6 8038.3 8780.2 11801.0 11761.0 11695.0 True False 9866.920090471272 10293.733841318082 10669.576430689738 9465.361841298169 9729.045410761522 10568.978888178584 9498.755060559466 10024.820238234768 9128.092342324615 9104.181931630761 8790.808734420198 1.122413237343862 1.1709655109447688 1.2137195510707988 1.0767339077958522 1.1067292788054508 1.2022760598573832 1.0805325593500086 1.1403751965371318 1.038367756379887 1.0356478233889401 1.0 13.101780180800535 -8.80014902803752 1.028544109543005 1.0096197337368753 1.14665679967061 0.5674516241764307 0.043790589218360286 0.20121979957413255 0.4263932952787263 0.009366186300513857 0.0096736079188304 1.584349430079241e-09 8.80014902803752 0.13703706593373477 LST(ph)PGAR ddPTM_A549_MK2206_60min_R1 2 LSTPGAR 7 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 LS(0.085)T(0.915)PGAR;LS(0.075)T(0.925)PGAR 86.095 0.014100999999999999 12098200.0 3257.0 3763.2000000000003 3108.6000000000004 3219.2 3998.4 2767.35 3078.9 3119.5 4677.6 4455.1 5402.299999999999 True False 3806.7019739952098 3954.7308060732007 3549.446223667881 4007.90414451538 3410.2406566484506 3060.1891401817393 3638.2962760728706 3561.6986780680822 3618.131068592289 3448.6898157986743 4060.75981410502 0.9374358859572679 0.9738893672894594 0.8740842566799704 0.9869837981044715 0.8398035867088234 0.7536001340321076 0.8959644112501495 0.8771015379182359 0.8909985407225359 0.8492720509643725 1.0 11.987533981895462 -10.510803590409779 0.8416444330560303 0.9994972405192204 0.8912183583843393 0.0 0.07467902201042079 0.631699564661559 0.8087596116793798 0.04138146975067927 0.0120016205747549 3.0845826367160196e-11 10.510803590409779 -0.10827888213488113 LST(ph)PGAR ddPTM_A549_PD325901_60min_R1 2 LSTPGAR 7 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 LS(0.074)T(0.926)PGAR;LS(0.372)T(0.628)PGAR 97.09299999999999 0.012383 19399300.0 6779.5 6499.6 6633.8 6980.4 8202.7 7050.200000000001 6573.5 8210.9 7362.3 8050.1 8302.2 True False 7467.749849195885 7047.344102348188 7084.009560280039 7411.563454361375 7626.570649778779 6992.785508686357 6823.658139657223 8047.127158173557 7052.888134087907 7541.8153121613395 7281.082031981953 1.025637373180799 0.9678979128916447 0.9729336284310108 1.0179206087510464 1.047450175163427 0.9604047142953119 0.937176385279618 1.1052103413787637 0.968659342541162 1.0358096885921795 1.0 12.82993714802239 LST(ph)PQKK ddPTM_A549_MK2206_60min_R1 3 LSTPQKK 7 1 Q96C90;F5GXC4;F5H2U0;B5MC51;P53671-3 Q96C90 PPP1R14B;LIMK2 Protein phosphatase 1 regulatory subunit 14B 1 LS(0.013)T(0.987)PQKK;LS(0.007)T(0.993)PQKK;LS(0.027)T(0.973)PQKK 90.601 0.0077244 351494900.0 16075.7 15837.1 11166.400000000001 8837.7 17820.5 17779.2 12889.2 14925.1 18036.1 22452.7 20296.2 True False 18788.88514686975 16643.14074427666 12749.963427898416 11002.936896739424 15199.128056673611 19660.583143122192 15231.000799492827 17040.77863120177 13950.952147733318 17380.619475922616 15256.093393376592 1.2315659495783444 1.0909175969978169 0.835729245957146 0.7212158848946435 0.9962660600434111 1.2887036435984196 0.9983552411985982 1.1169817981449954 0.9144511499772348 1.1392575430528227 1.0 13.897097960100174 -9.620849693820652 0.007461320577116451 4.5605648039289454e-05 1.9676368519915928 0.0 0.16506729867580727 15949.677847347053 50.49964704529235 6772.310710476311 6542.162853525376 2.3941442090325646e-10 9.620849693820652 1.9675912463435534 LST(ph)PQKK ddPTM_A549_PD325901_60min_R1 4 LSTPQKK 7 1 Q96C90;F5GXC4;F5H2U0;B5MC51;P53671-3 Q96C90 PPP1R14B;LIMK2 Protein phosphatase 1 regulatory subunit 14B 1 LS(0.115)T(0.885)PQKK;LS(0.083)T(0.917)PQKK;LS(0.065)T(0.935)PQKK;LS(0.094)T(0.906)PQKK 104.2 0.008802899999999999 950990000.0 37618.4 37709.3 27846.3 29585.5 32106.0 28864.9 23111.0 24576.3 29358.9 37377.9 42694.5 True False 41437.39227479761 40887.19505179984 29736.117371404915 31412.929141454417 29850.985319687104 28629.833824527108 23990.501751824442 24086.106416765608 28125.04753132493 35017.85301504769 37443.347162734404 1.1066690190570967 1.091974894073918 0.7941629054199478 0.8389455409776566 0.7972306853324369 0.7646173751533899 0.6407146681507431 0.6432679832837533 0.7511360405117965 0.9352222936388365 1.0 15.192421786672575 -5.756129792686347 24.570880945372615 0.8273673706677367 1.0993221464786644 0.5368971339416386 0.10538590664538254 81.23437551409425 375907.5467010408 0.018720646748517037 0.06837573700034857 1.753356417704126e-06 5.756129792686347 0.27195477581092775 LSTAS(ph)GYSDVTDSK ddPTM_A549_PD325901_60min_R1 1 LSTASGYSDVTDSK 14 0 E7ET89;Q86UW9;Q75MM6;Q86UW9-2 E7ET89 DTX2 Probable E3 ubiquitin-protein ligase DTX2 1 LS(0.048)T(0.048)AS(0.779)GY(0.004)S(0.05)DVT(0.05)DS(0.023)K 48.532 0.029505 16356000.0 5277.1 7286.2 4545.1 5819.5 5167.5 4751.5 4150.2 5722.5 3550.7 5714.4 4258.9 True False 5812.827307204306 7900.233644921128 4853.557817906599 6178.957297956566 4804.552626907213 4712.805359354805 4308.138132076581 5608.360248285593 3401.4764268918566 5353.591808774397 3735.0822993914767 1.5562782400139716 2.1151431244790087 1.2994513718472402 1.6543028513624045 1.2863311278817005 1.261767474339888 1.1534252224585433 1.5015359231038397 0.9106831267000538 1.433326331161862 1.0 11.866924316596506 -6.804091981793336 0.3975494049087211 0.9421233679363511 1.9450466548505358 0.3111352731242205 0.26360465598225996 0.8823309297662657 0.2034873672129016 0.0642636245903298 0.3538501014298258 1.5700302431391975e-07 6.804091981793336 1.0029232869141849 LSTEADTDT(ph)PK ddPTM_A549_MK2206_60min_R1 2 LSTEADTDTPK 11 0 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LSTEADT(0.017)DT(0.983)PK;LSTEADT(0.004)DT(0.996)PK 141.58 3.3067e-11 18528200.0 11250.400000000001 13466.9 11205.5 10577.5 16393.9 13146.8 11666.8 11679.400000000001 16902.7 15898.199999999999 16777.7 True False 13149.192474128236 14152.307688219393 12794.608395840705 13168.987974842012 13982.379026868015 14537.985649860444 13786.506542494706 13334.9907166624 13074.265438065437 12306.785578220568 12611.334049036486 1.0426488128060365 1.1221895822591932 1.0145325106837704 1.044218472339025 1.1087153010538386 1.1527714350704361 1.0931838367684823 1.0573814526529968 1.0367075669575432 0.9758512089496839 1.0 13.62243327409984 -8.948112026400327 1.3369555082777695 1.0120043090640145 1.0829145574838854 0.43500758173974596 0.03911231812551919 0.30000311414663416 1.0800205888929317 0.008370675509352207 0.008283468461300575 1.1269067327293605e-09 8.948112026400327 0.07091024841987092 LSTEADTDT(ph)PKK ddPTM_A549_MK2206_60min_R1 2 LSTEADTDTPKK 12 1 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LSTEADT(0.185)DT(0.815)PKK;LST(0.001)EADT(0.122)DT(0.876)PKK 91.20700000000001 0.00016696 89975000.0 6638.3 7264.799999999999 7338.0 6279.900000000001 9410.2 6580.8 6728.9 6239.299999999999 9289.6 8384.2 9329.599999999999 True False 7758.682749147185 7634.547289530341 8378.638740679055 7818.475781915422 8025.972045616562 7277.175888018505 7951.454029707599 7123.739882054878 7185.520432442905 6490.2033969202075 7012.802836139088 1.1063597438051949 1.0886584819107157 1.194763197605015 1.1148860112855958 1.144474218533039 1.0376986289300796 1.1338482223871116 1.01581921643998 1.0246288966536676 0.9254792339910417 1.0 12.775775452096534 -8.121149619953984 0.8359103974702832 1.007157306897933 1.1294835334448374 0.6300628306753908 0.045171370228683574 0.23749287980645814 0.3316133742740473 0.007445398124856016 0.010824760500341306 7.565722014039907e-09 8.121149619953984 0.1223262265469045 LSTEADTDT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 LSTEADTDTPKK 12 1 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LSTEADT(0.002)DT(0.998)PKK 97.45 5.855100000000001e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LSTIQNS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 LSTIQNSPTK 10 0 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LSTIQNS(0.992)PT(0.008)K;LST(0.001)IQNS(0.992)PT(0.007)K 182.23 5.9842e-14 29459000.0 11440.2 12415.2 11752.5 11712.599999999999 17264.699999999997 13721.400000000001 11706.900000000001 11539.7 18806.2 19560.6 19875.0 True False 13371.02607396376 13047.080650393285 13419.181221018056 14582.187525798588 14725.085500409787 15173.389440471836 13833.892193431908 13175.487813849097 14546.625727330327 15141.846874573299 14939.488977905205 0.8950122787826862 0.8733284431408128 0.8982356251183952 0.9760834220879276 0.985648540066363 1.0156565236543604 0.9259950065153887 0.8819235941292917 0.9737030328710772 1.0135451685775445 1.0 13.866843179507187 -2.0000000000000004 0.23230663768260246 0.9911610464981818 0.32272353704472584 0.3939423694496058 0.040752726516314404 35.01963002997932 0.4152880861135009 0.02396293980782694 9.065460016277154 0.00999999999999999 2.0000000000000004 -0.668437509453456 LSTIQNS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 LSTIQNSPTK 10 0 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LST(0.002)IQNS(0.955)PT(0.043)K;LST(0.006)IQNS(0.965)PT(0.029)K 160.56 9.3312e-09 53650000.0 13126.0 13513.5 13985.2 13370.8 16872.0 13927.400000000001 16400.6 14076.2 17179.800000000003 15486.7 18117.7 True False 14458.541857149507 14652.330070632383 14934.31977183942 14196.683948709962 15686.968925240171 13813.979872014754 17024.73380775268 13795.439148434727 16457.792750363802 14508.867119023245 15889.337757562991 0.9099524522516708 0.9221485686940087 0.9398956709023948 0.893472350158372 0.9872638598656198 0.8693867600265209 1.0714564739898782 0.8682198943041781 1.0357758769732388 0.9131196869496546 1.0 13.955771376244092 -8.153266660722233 0.7928532751589477 1.0155145717877225 0.9219442945272471 0.0 0.06574861133639895 0.48662470904062183 0.6138442490500615 0.011550767494217408 0.01662346331870987 7.026407596535237e-09 8.153266660722233 -0.0935702772604754 LSTIQNS(ph)PTKK ddPTM_A549_PD325901_60min_R1 2 LSTIQNSPTKK 11 1 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LSTIQNS(0.93)PT(0.07)KK;LSTIQNS(0.848)PT(0.152)KK 104.17 8.3127e-05 29310000.0 8840.8 8825.8 8893.900000000001 9985.400000000001 12590.7 10329.6 10407.599999999999 10816.400000000001 12578.4 10622.1 12091.2 True False 9738.311507747021 9569.581140147797 9497.493537365403 10602.175479511207 11706.372667556972 10245.479162367963 10803.666913257239 10600.658416698352 12049.773590564264 9951.418793221072 10604.059052431903 0.9183569668554105 0.902445100770458 0.8956469867250764 0.9998223724602642 1.1039520441818238 0.9661846573759221 1.0188237221085221 0.9996793081105323 1.1363359569183844 0.9384537321054284 1.0 13.372328989044309 -6.415188437051424 3.669369703897777 1.0521005098910123 0.9055342739546584 0.383863222709381 0.058182132702343174 0.14289827643705735 3.4801446140212207 0.00855395188097066 0.020880337446280966 3.844249468118352e-07 6.415188437051424 -0.14656623593635398 LSTS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 LSTSPVR 7 0 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;A0A0J9YW26;A0A0J9YY18;A0A0J9YWS4;A0A0J9YWE1;A0A0J9YWN0;A0A0J9YW31 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 LS(0.026)T(0.112)S(0.862)PVR 64.734 0.025554 6954700.0 4165.1 3925.0 4007.5 4047.9 5103.0 4150.8 4263.7 4081.5 4420.9 4518.6 4517.7 True False 4587.937885815441 4255.773524788697 4279.473049055181 4297.92958955209 4744.582884394298 4116.997260993354 4425.957436686166 4000.0912806251913 4235.104947093874 4233.294824850899 3962.051540059849 1.1579702685407616 1.0741338121826682 1.0801154416558996 1.084773770885163 1.197506603945548 1.0391074470806012 1.1170872947854964 1.0096010211327962 1.0689171769405859 1.0684603120500935 1.0 11.952031932205266 -10.254781611599448 0.18232492843745196 0.9382820409658049 1.1354575017440771 0.23144084838496826 0.04915045712284403 5.169772801179802 0.3392250567471447 0.2727760624755003 0.08685416070107309 5.5618386840068574e-11 10.254781611599448 0.1971754607782722 LSTTPS(ph)PTSS(ph)LHEDGVEDFRR ddPTM_A549_MK2206_60min_R1 2 LSTTPSPTSSLHEDGVEDFRR 21 1 C9J919;C9JNL1;O94842-3;O94842-2;O94842 C9J919 TOX4 TOX high mobility group box family member 4 2 LS(0.006)T(0.024)T(0.114)PS(0.824)PT(0.042)S(0.234)S(0.757)LHEDGVEDFRR;LS(0.002)T(0.011)T(0.082)PS(0.895)PT(0.033)S(0.151)S(0.826)LHEDGVEDFRR 103.29 2.6155999999999997e-10 5997700.0 1225.05 2167.9 1844.34 1516.5900000000001 2200.26 2246.33 1842.91 2084.33 3035.8 2571.1 3848.7 True False 1431.8084904030786 2278.236850150428 2105.895145132734 1888.1546180823118 1876.6046686667985 2484.0351496068256 2177.7428919865697 2379.7901604929143 2348.19614717643 1990.2867242934992 2892.961571283713 0.49492827855564386 0.7875102361416749 0.7279374762652899 0.6526718629188248 0.6486794319338574 0.8586478210647535 0.7527728379123354 0.8226138169671277 0.8116928238816699 0.6879755141062368 1.0 11.498331443986759 -14.999999998877778 0.047606593317190624 2.22523649625404 0.10559851563838475 0.12106340345466349 0.1178879967836423 152.8154213947027 0.5561702495856576 24.369791567174822 6.119769193887977 1.0000000025840124e-15 14.999999998877778 -2.119637980615655 LSTTPS(ph)PTSS(ph)LHEDGVEDFRR ddPTM_A549_PD325901_60min_R1 1 LSTTPSPTSSLHEDGVEDFRR 21 1 C9J919;C9JNL1;O94842-3;O94842-2;O94842 C9J919 TOX4 TOX high mobility group box family member 4 2 LS(0.007)T(0.027)T(0.127)PS(0.723)PT(0.125)S(0.22)S(0.771)LHEDGVEDFRR 55.994 0.0022273 4953700.0 910.11 918.96 797.3 847.48 919.43 810.82 586.0 801.98 820.47 888.75 1058.8 True False 1002.503697212429 996.4039842904003 851.4095725543839 899.8269148332722 854.852408661307 804.2169507465139 608.3005506715043 785.9838797588611 785.9884991612822 832.6341733249762 928.5743122862 1.0796160134391515 1.0730471122307919 0.9168997691290508 0.9690413604247246 0.9206074272683834 0.8660771034754219 0.6550908663129347 0.8464415495446201 0.8464465242702398 0.8966801712132075 1.0 9.85887356108431 -5.752983558198833 1.2380729249743838 0.8954441474469115 1.1152873963335364 0.4255932853811266 0.08609177297743463 0.7015623433703243 1.5262271103438896 0.015342569066514149 0.15646059520376873 1.766104681752941e-06 5.752983558198833 0.21984324888662488 LSTTPSPT(ph)S(ph)SLHEDGVEDFRR ddPTM_A549_MK2206_60min_R1 1 LSTTPSPTSSLHEDGVEDFRR 21 1 C9J919;C9JNL1;O94842-3;O94842-2;O94842 C9J919 TOX4 TOX high mobility group box family member 4 2 LS(0.01)T(0.013)T(0.07)PS(0.439)PT(0.501)S(0.495)S(0.472)LHEDGVEDFRR 40.669000000000004 0.024416999999999998 2115700.0 228.26 231.36 383.59 260.2 214.64 289.95 310.47 205.64 336.49 281.68 485.14 True False 266.78470757879836 243.13523578154133 437.98882999960153 323.94901168082174 183.06674033188867 320.632316546767 366.8783802112261 234.79009974608763 260.27555226411414 218.04829236474382 364.6663488171539 0.7315857589935341 0.6667334032059288 1.2010673082950465 0.8883435851199198 0.5020116084900379 0.8792484351429262 1.0060659049052572 0.6438490979704106 0.7137361401959741 0.5979391656839569 1.0 8.510433264593935 -10.957241724881982 1.2502262775559516 0.998875677556228 0.7995337230307357 0.0 0.2161737740603567 0.7466308361951577 2.09390263849548 0.12491432217414915 0.029745574562967458 1.1034642694407438e-11 10.957241724881982 -0.1993419545254923 LSVAST(ph)PISQR ddPTM_A549_PD325901_60min_R1 1 LSVASTPISQR 11 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 LSVAS(0.334)T(0.666)PISQR 85.274 0.00047057 10314000.0 2517.3 2878.9 2980.7 3603.5 3346.1 3257.8 2972.7 2704.2 2898.3 2895.1 3459.5 True False 2772.854442861686 3121.5150065004277 3182.988226405185 3826.0800108577178 3111.081479418331 3231.269556920149 3085.8277252238586 2650.2626095961386 2776.4945301097464 2712.3028919191443 3034.003431577361 0.9139259415471706 1.0288435978721258 1.049105018563004 1.2610664744266822 1.025404733244121 1.0650184252561081 1.0170811585468624 0.873519977602096 0.9151257052686532 0.8939683006584582 1.0 11.567007001992861 -8.017963472287393 6.259965398629097 0.9518900076560185 1.0619086554553272 0.34588598810686266 0.08385441855579356 0.17394884652961182 26.91167818911413 0.013634147672466599 0.01813043684775633 9.594813283376007e-09 8.017963472287393 0.1100186477993087 LSVDYGK ddPTM_A549_PD325901_60min_R1 2 LSVDYGK 7 0 Q9BQE3;F5H5D3;F8VQQ4;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;C9JDS9;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 107.59 0.025484 29161000.0 20741.0 20644.4 20637.2 21223.0 25183.0 21840.0 22641.0 21033.0 24822.0 21294.4 22052.0 False True 22846.611051282795 22384.176039528094 22037.76449356496 22533.896509069873 23414.232956633663 21662.14228102891 23502.615644630598 20613.480314930694 23778.817660830187 19949.867949874966 19339.74379914553 1.1813295609578967 1.1574184369762475 1.1395065375446511 1.1651600322681352 1.2106795829254031 1.1200842423768815 1.2152495859675758 1.0658610852870471 1.229531161725151 1.0315476852778367 1.0 14.239281062567386 -10.933680946789428 1.1050003674218776 0.9968142643921624 1.168406886348867 0.6168842192670734 0.04514735316591912 0.244798060643095 0.5144417234324188 0.0333470932982758 0.007250098603195451 1.1649815655195982e-11 10.933680946789428 0.17159262195670466 LSVDYGKK ddPTM_A549_MK2206_60min_R1 2 LSVDYGKK 8 1 Q9BQE3;F5H5D3;F8VQQ4;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;C9JDS9;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 76.679 0.0046553 25900000.0 8532.2 9463.2 9412.0 8778.4 12066.3 8141.200000000001 9315.5 7896.4 13392.0 12534.400000000001 13234.9 False True 9972.226767737764 9944.836459404742 10746.76312718333 10929.108394077353 10291.36325413095 9002.696380308806 11008.00576821489 9015.73888171079 10358.733382629538 9702.870334481124 9948.309065342271 1.0024041977624938 0.9996509350569307 1.0802602790681985 1.0985895514798563 1.0344836681827472 0.904947395700866 1.1065202835891348 0.9062584226619625 1.0412556862268276 0.9753285981316964 1.0 13.280235613297558 -7.012113159687342 24.88937074864906 1.008959810142377 1.047231211230138 0.12091329691467823 0.06115591535474325 1120.1892719286143 2301698.274431416 0.008354450556437115 0.01503635814928619 9.724937979636613e-08 7.012113159687342 0.03827140108776117 LSVDYGKK ddPTM_A549_PD325901_60min_R1 2 LSVDYGKK 8 1 Q9BQE3;F5H5D3;F8VQQ4;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;C9JDS9;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 76.679 0.0046553 61049000.0 20439.8 19435.800000000003 19097.1 20763.9 23253.0 23880.0 23336.0 23505.0 24824.0 22802.0 25575.0 False True 22514.83344901454 21073.723075946044 20393.144046191297 22046.438944761623 21619.7894984951 23685.52919738877 24224.06424994917 23036.1743356842 23780.73360778537 21362.277828586328 22429.437133282547 1.0038073320888323 0.93955648332678 0.9092133665686314 0.9829243067382819 0.9639024541732246 1.056001943189307 1.0800121334299386 1.0270509330571356 1.0602465619833885 0.952421485284948 1.0 14.453105795996327 -7.203116372376786 6.424598599895221 1.034990309524087 0.9567346971378333 0.4357803915260682 0.03897268055005949 0.14060196118116272 12.385198779562739 0.005101552726182609 0.008857201960610859 6.264459814067783e-08 7.203116372376786 -0.07825561238625378 LSVGAVSSKPT(ph)TPTIATPQTVSVPNK ddPTM_A549_PD325901_60min_R1 1 LSVGAVSSKPTTPTIATPQTVSVPNK 26 1 Q9HBM6 Q9HBM6 TAF9B Transcription initiation factor TFIID subunit 9B 1 LSVGAVS(0.024)S(0.021)KPT(0.468)T(0.468)PT(0.019)IATPQTVSVPNK 92.238 5.204999999999999e-09 2830500.0 1294.7 1541.0 1264.8 1579.2 2012.6 1770.1 1838.1 1673.7 1196.4 1666.9 1897.7 True False 1426.1369908922354 1670.8654781399712 1350.6369338602597 1676.7435973765805 1871.2419190930732 1755.6848924747837 1908.0499013469134 1640.3167405077506 1146.119468593072 1561.6516495250667 1664.2949305114494 0.8569016012408172 1.0039479466698265 0.8115370113187809 1.0074798442493036 1.1243451414696237 1.054912119413384 1.1464614031844442 0.9855925836436153 0.6886516611817484 0.9383262671149039 1.0 10.700695401484229 -8.55627940515673 24.807919106459984 0.852140013929883 1.0053940320263945 0.17165696305452283 0.11761164370320587 209.04077655877822 155261.45653631666 0.0244049040957475 0.027672649164125436 2.777925502840679e-09 8.55627940515673 0.1532540180965115 LSVGEQPDVTHDPYEFLQS(ph)PEPAASAK ddPTM_A549_MK2206_60min_R1 2 LSVGEQPDVTHDPYEFLQSPEPAASAK 27 0 Q9H8M2;Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6 Q9H8M2 BRD9 Bromodomain-containing protein 9 1 LSVGEQPDVTHDPYEFLQS(1)PEPAASAK;LSVGEQPDVTHDPYEFLQS(1)PEPAASAK 238.86 4.5963e-112 51584000.0 11877.599999999999 13074.4 11339.6 10570.7 19135.4 13776.8 14094.2 13969.6 22280.0 18348.699999999997 17899.5 True False 13882.248500560483 13739.83111472244 12947.7257922873 13160.521974536763 16320.608008511095 15234.651831700286 16654.933701720165 15949.833580105751 17233.61557384902 14203.715926274408 13454.560148931545 1.0317876130393533 1.0212025486253855 0.9623299200394526 0.978145835230583 1.2130168379980188 1.1323039670613166 1.2378653421117425 1.1854593092270178 1.280875434282969 1.0556804361532661 1.0 13.715807607292726 -6.751894139307363 24.989710227951246 1.1522562083713033 0.9974235559564487 0.4985507837056593 0.07682483005828278 187.3861541201583 490578.5311196356 0.015239657330850795 0.03139922394733123 1.7705404807241796e-07 6.751894139307363 -0.15483265241485455 LSVGSVTSRPS(ph)TPTLGTPTPQTMSVSTK ddPTM_A549_MK2206_60min_R1 1 LSVGSVTSRPSTPTLGTPTPQTMSVSTK 28 1 D6RIE8;Q16594 D6RIE8 TAF9 Transcription initiation factor TFIID subunit 9 1 LS(0.013)VGS(0.067)VT(0.062)S(0.062)RPS(0.35)T(0.35)PT(0.071)LGT(0.009)PT(0.011)PQT(0.004)MS(0.001)VSTK 45.408 0.0060135 6894600.0 688.3 796.6 653.9 637.0 1152.3 581.46 821.05 762.72 1252.0 1296.2 1127.7 True False 804.468212680657 837.143537446299 746.6328526206097 793.0650285960164 982.7981964425795 642.9897112580895 970.2241571566565 870.8378957320364 968.4239990331679 1003.3875197500026 847.6609670633311 0.9490447760826917 0.9875924101430916 0.8808154222404188 0.9355922466779862 1.1594236783692222 0.758545852931848 1.144589871252345 1.0273422153069054 1.1424661942241046 1.1837132518041695 1.0 9.727343545437556 LSVGSVTSRPS(ph)TPTLGTPTPQTMSVSTK ddPTM_A549_PD325901_60min_R1 1 LSVGSVTSRPSTPTLGTPTPQTMSVSTK 28 1 D6RIE8;Q16594 D6RIE8 TAF9 Transcription initiation factor TFIID subunit 9 1 LS(0.001)VGS(0.016)VT(0.087)S(0.079)RPS(0.386)T(0.386)PT(0.043)LGT(0.002)PTPQTMSVSTK 96.492 1.5934000000000002e-10 11992000.0 1383.4 1074.1 1041.5 1319.5 1626.2 1451.6 1184.4 1767.8 1665.6 1379.2 1589.3 True False 1523.8417495947467 1164.6181765542772 1112.1824530482766 1401.002518198074 1511.9813220854405 1439.7786508764455 1229.4729901285489 1732.5398421877273 1595.6006242800238 1292.117076624255 1393.8261754027749 1.09327961871171 0.8355548181736052 0.797934830522815 1.00514866410313 1.0847703600117298 1.0329685840921963 0.8820848767410091 1.243009976970101 1.1447629930030134 0.9270288501009613 1.0 10.444834938034184 -6.4910860614720045 6.492464916269333 1.066499803015379 0.900817520182707 0.19235615226760205 0.11620432255928358 0.18708221914033737 25.699223355671137 0.015697583707411516 0.03587764767302427 3.227854414232904e-07 6.4910860614720045 -0.16568228283267195 LSVGSVTSRPST(ph)PTLGTPTPQTMSVSTK ddPTM_A549_PD325901_60min_R1 1 LSVGSVTSRPSTPTLGTPTPQTMSVSTK 28 1 D6RIE8;Q16594 D6RIE8 TAF9 Transcription initiation factor TFIID subunit 9 1 LS(0.001)VGS(0.005)VT(0.056)S(0.051)RPS(0.174)T(0.675)PT(0.032)LGT(0.003)PT(0.001)PQTMSVSTK 75.068 2.296e-06 10902000.0 1421.6 1201.9 1409.8 1463.5 1846.0 1458.0 1416.3 1744.8 1623.1 1424.8 1315.9 True False 1565.9197854733932 1303.1883310684175 1505.4775058160922 1553.897071150346 1716.3433283542754 1446.1265313983588 1470.1980715290983 1709.9985952308798 1554.8867514822916 1334.8378848421107 1154.0526421773804 1.3568876568047472 1.1292278042097446 1.304513720427579 1.3464698353955231 1.4872314014341728 1.253085412698259 1.2739436814210123 1.4817336165918584 1.3473274048821962 1.1566525096495062 1.0 10.172493318763392 -10.606501354987964 0.8666014598146726 0.997639980867974 1.329163539327291 0.44022572851717356 0.10482225840739633 0.3273406327559347 0.4346715021742357 0.06865766180790105 0.018293546756715594 2.47456374074454e-11 10.606501354987964 0.3315235584593169 LSVHDMKPLDS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 LSVHDMKPLDSPGR 14 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 LSVHDMKPLDS(1)PGR 52.298 0.0067659999999999994 3901700.0 1477.5 1721.9 1916.0 1839.5 2514.8 1736.2 1856.1 2148.1 1771.4 2273.1 2370.1 True False 1627.4947123219881 1867.0105560085747 2046.031281843973 1953.1217371923885 2338.1691235890203 1722.0609628352754 1926.7349011968931 2105.254460348149 1696.954218209434 2129.5760780703263 2078.592725301779 0.7829791245351835 0.8982089339976469 0.9843348612446055 0.9396365692123867 1.124880836504205 0.8284744490218782 0.9269420015492268 1.0128268201470296 0.8163957265669074 1.0245278221885172 1.0 11.021391392186164 -5.782386512935378 0.004219620197422129 1.8230480964936577 4.1311019796284686e-07 0.023090662369682158 0.09724618257833909 146422.23801079602 106.6758368487069 22416.680795950422 23684.020129501536 1.6504922410810166e-06 5.782386512935378 -1.8230476833834597 LSVHDMKPLDS(ph)PGRR ddPTM_A549_PD325901_60min_R1 1 LSVHDMKPLDSPGRR 15 2 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 LSVHDMKPLDS(1)PGRR 76.155 0.0001299 6997700.0 2368.9 2480.4 2720.5 3244.4 3068.3 3311.0 2598.6 2704.4 3204.7 2625.0 2634.0 True False 2609.3889841079917 2689.432012964558 2905.129489695476 3444.799219432989 2852.793193060361 3284.0363137585523 2697.4911450084824 2650.458620439241 3070.017603644446 2459.2570520146965 2310.0346983017107 1.1295886533766615 1.1642387947426818 1.2576129232306625 1.4912326736760853 1.2349568580756276 1.4216393875697657 1.1677275440891088 1.1473674496698265 1.3289919869608273 1.0645974512082832 1.0 11.173698806732789 -10.88061641372434 0.8679171902121847 0.9806322326178519 1.2677134581206577 0.3794292120970352 0.11129798084971812 0.5484642519065337 0.6474248830546445 0.10983924661804272 0.02017270633212027 1.3163870045889566e-11 10.88061641372434 0.2870812255028058 LSVISVEDPPQR ddPTM_A549_PD325901_60min_R1 1 LSVISVEDPPQR 12 0 P38117-2;P38117 P38117-2 ETFB Electron transfer flavoprotein subunit beta 0 110.87 0.00020862 1142900.0 1688.4 1544.5 1523.9 1555.7 2351.4 2034.1 1579.2 1973.5 1991.7 2212.3 2397.2 False True 1859.805125065613 1674.6604354232206 1627.3210179551318 1651.792055748953 2186.245775889623 2017.534964003706 1639.2973201713985 1934.1369943192005 1907.9957753233205 2072.615000446519 2102.3595971028326 0.8846275050322158 0.7965623187065596 0.7740450397722968 0.7856848362312583 1.0399009659919218 0.9596526525642808 0.7797416400269681 0.9199839061712125 0.9075496779678623 0.9858518035176744 1.0 11.037793740159342 -14.999998484012192 0.033109761165871776 1.765585931926017 0.381216663773482 0.32364844219715283 0.07638245156384289 712.8150000705989 1.8222114720543883 61.378685538200806 23.328982600002124 1.0000034906970208e-15 14.999998484012192 -1.384369268152535 LSVPT(ph)S(ph)DEEDEVPAPKPR ddPTM_A549_PD325901_60min_R1 3 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 2 LS(0.008)VPT(0.993)S(0.999)DEEDEVPAPKPR;LS(0.005)VPT(0.998)S(0.997)DEEDEVPAPKPR;LS(0.025)VPT(0.988)S(0.988)DEEDEVPAPKPR 124.31 7.045499999999999e-11 107469600.0 18361.0 20017.3 18229.0 18211.9 21566.7 21620.0 19703.6 20388.4 19339.8 20717.0 21515.8 True False 20224.995203346203 21704.228121720465 19466.129559881945 19336.807700774145 20051.929393075938 21443.933888088166 20453.43128022362 19981.737367609618 18527.01546196614 19408.92508441465 18869.49299989367 1.0718356451580426 1.150228473114925 1.0316191092146267 1.024765620405546 1.0626639196500367 1.1364340254509753 1.0839417508641527 1.0589440515292177 0.9818501992645239 1.0285875240274882 1.0 14.203768039564354 -8.658763223888181 4.163875039611519 0.9914108059617779 1.0798556364624277 0.433046488413949 0.037558222179920345 0.12394138821585537 3.9361435983376047 0.00637001798459237 0.0071920348321305935 2.1940007722955556e-09 8.658763223888181 0.08844483050064977 LSVPT(ph)SDEEDEVPAPKPR ddPTM_A549_PD325901_60min_R1 1 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.919)S(0.081)DEEDEVPAPKPR 210.92 8.1445000000000005e-56 529170000.0 14912.0 13169.0 14417.0 15065.0 18079.0 17258.0 15936.0 15813.0 15392.0 16155.0 16327.0 True False 16425.855262365803 14278.797846609516 15395.42431646376 15995.5308349026 16809.19340916412 17117.45656987167 16542.45320051381 15497.597309941473 14745.127767121832 15134.970542970443 14318.882505380428 1.1471464519800105 0.9972005735254933 1.075183367883549 1.1170935182191877 1.1739179648165936 1.1954464018710715 1.155289401550565 1.0823189103003068 1.0297680535880673 1.0569938357468442 1.0 13.805631283684077 -8.699486101567139 2.5667109896023637 1.0125392904574282 1.1208408323100825 0.3742345428710182 0.05224608658406576 0.1927913376426275 2.5226101688366547 0.009986154895331735 0.011052002826170226 1.9976246960531824e-09 8.699486101567139 0.10830154185265428 LSVPTS(ph)DEEDEVPAPK ddPTM_A549_MK2206_60min_R1 2 LSVPTSDEEDEVPAPK 16 0 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.195)S(0.805)DEEDEVPAPK;LSVPT(0.092)S(0.908)DEEDEVPAPK 137.68 1.3079e-10 5005100.0 2621.7 3046.6000000000004 2616.8999999999996 2399.8 3525.7 3301.7 2657.4 2719.1 4061.8999999999996 4383.2 3720.8999999999996 True False 3064.178865588957 3201.6589269192746 2988.0157700303926 2987.7511077311174 3007.074200466549 3651.083702508919 3140.215182057244 3104.540751894508 3141.886135521425 3393.0320757353893 2796.897838384278 1.0955633858114326 1.1447178666950597 1.0683321103199537 1.0682374832314547 1.0751462420964528 1.3054047424978847 1.122749332836302 1.1099943334676643 1.1233467638333337 1.2131412271016262 1.0 11.44961184246327 -10.525195208625728 0.7539279825566226 0.9967209734227844 1.1251422073671649 0.0 0.0884538698930319 0.652112379834969 0.6410363910426972 0.04889233964439039 0.012549178141813208 2.984041037321529e-11 10.525195208625728 0.12842123394438043 LSVPTS(ph)DEEDEVPAPK ddPTM_A549_PD325901_60min_R1 2 LSVPTSDEEDEVPAPK 16 0 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.186)S(0.814)DEEDEVPAPK;LSVPT(0.209)S(0.791)DEEDEVPAPK 162.88 1.3156999999999998e-20 8416100.0 5192.0 5762.0 4847.8 5366.1 6433.5 5294.299999999999 4523.1 5427.0 5365.5 5589.299999999999 6231.6 True False 5719.088017851615 6247.583961740757 5176.800860189569 5697.551809702675 5981.633154370114 5251.184976119573 4695.229045635293 5318.754227600858 5140.006694028857 5236.3906441240915 5465.1527053671 1.0464644496090907 1.1431673181986781 0.947238099148748 1.0425238080003412 1.0945043033282127 0.9608487190051619 0.8591212906135822 0.9732123719759066 0.9405055944696787 0.9581416890660072 1.0 12.416046092397863 -7.279093179532676 23.6804735081731 0.9612704416189501 1.0530346166721378 0.4688342276090768 0.05535699953831714 330.799297013104 443727.14818903833 0.008542518420262353 0.013677950908480185 5.259044194921029e-08 7.279093179532676 0.09176417505318768 LSVPTS(ph)DEEDEVPAPKPR ddPTM_A549_MK2206_60min_R1 4 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.028)S(0.972)DEEDEVPAPKPR;LSVPT(0.012)S(0.988)DEEDEVPAPKPR;LSVPT(0.019)S(0.981)DEEDEVPAPKPR;LSVPT(0.009)S(0.991)DEEDEVPAPKPR 236.96 7.077999999999999e-75 572331300.0 18403.09 20362.319999999996 20918.100000000002 18490.64 29081.5 21765.899999999998 19662.899999999998 20207.02 30618.5 32343.5 32635.6 True False 21509.081679647363 21398.67511349928 23884.601123112356 23020.847630076387 24803.649874030107 24069.153090964915 23235.394409299824 23071.426966403353 23683.45863769732 25037.080886463686 24531.279823261542 0.8768022636654933 0.8723016193068003 0.9736386073287551 0.9384283166607189 1.0111029694631053 0.9811617357257317 0.9471741619965173 0.9404901469725236 0.9654391784011088 1.0206186170002645 1.0 14.582334882360888 -5.765803949716087 9.557466220172742 0.9762252501343683 0.8744074513845331 0.6901665092749258 0.026040509109498188 0.03982443994564062 49.22057437310315 0.0034623976530447484 0.011719174319806604 1.7147312009979081e-06 5.765803949716087 -0.10181779874983521 LSVPTS(ph)DEEDEVPAPKPR ddPTM_A549_PD325901_60min_R1 3 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.105)S(0.895)DEEDEVPAPKPR;LSVPT(0.012)S(0.988)DEEDEVPAPKPR;LSVPT(0.01)S(0.99)DEEDEVPAPKPR 275.83 8.387999999999998e-116 508190000.0 21397.300000000003 20674.399999999998 22288.2 20755.399999999998 25717.4 23775.3 23976.5 24582.3 23534.899999999998 24800.3 25071.7 True False 23569.53814414029 22416.704244813103 23800.811281834467 22037.41391906654 23911.098544213568 23581.681839475597 24888.938827944236 24091.986742058725 22545.80999781935 23234.40482555431 21988.039842600978 1.0719253882046922 1.0194953440725354 1.0824435216695085 1.0022454969528436 1.0874593058489341 1.0724776746032176 1.1319307680952477 1.0956859690321932 1.0253669794675246 1.056683769534497 1.0 14.424431378221442 -8.927559280113455 4.878386908068764 1.0108221685795193 1.0694952644836833 0.19098706849485048 0.03615267651423054 0.1626945786101854 6.914346230918359 0.006165524916291665 0.006464883814064226 1.18151902713754e-09 8.927559280113455 0.05867309590416392 LSVPYVPQVT(ph)DEDRLSRR ddPTM_A549_PD325901_60min_R1 2 LSVPYVPQVTDEDRLSRR 18 2 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 LSVPYVPQVT(0.5)DEDRLS(0.5)RR;LSVPYVPQVT(0.5)DEDRLS(0.5)RR 53.909 0.004283100000000001 7378000.0 673.7 716.1 792.3 872.22 840.89 894.81 762.94 613.5899999999999 1114.51 702.44 901.86 True False 742.093528048273 776.448260153169 846.0702424869413 926.0950484446562 781.8287873130157 887.5229640333098 791.9740991967872 601.3514660979569 1067.671020512926 658.0878185208394 790.9369373615722 0.9382461394757561 0.9816816277960986 1.0697063223640613 1.1708835492421785 0.9884843536591682 1.122115964129747 1.0013113078757894 0.7603026710371633 1.3498813496743374 0.832035763453033 1.0 9.627418860727376 -8.778739289336125 24.999912511668974 1.1652217032894334 1.014412560536083 0.0 0.1606349455897249 324.1905888697854 468482.4013655678 0.027129986970651703 0.028915455551981425 1.664411510885832e-09 8.778739289336125 -0.15080914275335044 LSVPYVPQVTDEDRLS(ph)R ddPTM_A549_MK2206_60min_R1 3 LSVPYVPQVTDEDRLSR 17 1 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 LSVPYVPQVT(0.044)DEDRLS(0.956)R;LSVPYVPQVT(0.002)DEDRLS(0.998)R;LSVPYVPQVT(0.106)DEDRLS(0.894)R 90.96799999999999 1.5809e-06 88385000.0 1481.4899999999998 2354.25 1729.1599999999999 1310.38 1868.3799999999999 1921.3500000000001 1615.3799999999999 2056.33 2338.01 2557.4 2982.57 True False 1731.5292930470248 2474.0712691852245 1974.3808891840536 1631.4231588251935 1593.5437770280193 2124.6659817110913 1908.8736361825952 2347.821074746509 1808.4544680347747 1979.6815638085618 2241.915554255635 0.7723436726955268 1.103552390494329 0.8806669303115617 0.7276916187714579 0.7107956292123192 0.9477011646036448 0.8514476080774519 1.0472388535285564 0.8066559262689184 0.8830312810180129 1.0 11.130516222149293 LSVPYVPQVTDEDRLS(ph)R ddPTM_A549_PD325901_60min_R1 4 LSVPYVPQVTDEDRLSR 17 1 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 LSVPYVPQVT(0.005)DEDRLS(0.995)R;LSVPYVPQVT(0.001)DEDRLS(0.999)R;LSVPYVPQVT(0.008)DEDRLS(0.992)R;LSVPYVPQVTDEDRLS(1)R 123.53 1.3387999999999998e-10 168364000.0 6736.6 5998.2 6243.5 7085.93 7876.4 6643.2 7444.1 7560.1 7220.299999999999 7181.3 8347.6 True False 7420.494672777195 6503.689364684728 6667.221455215473 7523.611802785354 7323.188836104885 6589.099981745938 7727.389299067826 7409.307874716285 6916.855900269602 6727.8714924316755 7320.8981197962685 1.0136044172929561 0.8883731556239329 0.9107108644480103 1.0276897287289017 1.0003129009953604 0.9000398412769203 1.0555247693138052 1.0120763536759172 0.9448097469852633 0.9189953721988012 1.0 12.837804932282692 -6.242391029882238 24.919199037231436 0.9814546460065988 0.932643847069566 0.12520209190056586 0.05233568666753015 1117.9491995443266 1462507.7581011958 0.006671382439311582 0.01761815803618419 5.722805292457554e-07 6.242391029882238 -0.04881079893703277 LSVPYVPQVTDEDRLS(ph)RR ddPTM_A549_MK2206_60min_R1 1 LSVPYVPQVTDEDRLSRR 18 2 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 LSVPYVPQVT(0.445)DEDRLS(0.555)RR 57.496 0.0014413 2771100.0 375.82 227.96 303.52 207.72 611.86 237.29 196.27 243.67 306.96 415.86 423.83 True False 439.24922808316825 239.56219030411535 346.56369999603515 258.61140932490525 521.8562045260411 262.3998702996457 231.92971843996958 278.21096870807804 237.4340501143939 321.9169371726864 318.58131388707227 1.378766452821113 0.7519656045772763 1.0878343609282803 0.8117595039380603 1.6380628171777325 0.823651164903723 0.7280079161271268 0.873280875496344 0.7452855511750363 1.0104702414743525 1.0 8.315517839082867 LSVPYVPQVTDEDRLSR ddPTM_A549_PD325901_60min_R1 2 LSVPYVPQVTDEDRLSR 17 1 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 0 ; 59.261 0.018569 2409700.0 1449.9 1549.7 1502.3 1584.4 1845.1 1750.3 1662.7 1788.8 1666.2 1593.4 2073.4 False True 1597.0927806400339 1680.298657672623 1604.255112063779 1682.264789566523 1715.506541249444 1736.0461371101155 1725.9749583643509 1753.1209807135463 1596.1754083665808 1492.792452068654 1818.384944365515 0.8783029058774483 0.9240610261755802 0.8822417481154126 0.9251422779204279 0.9434231990124796 0.9547187148075901 0.9491801852586234 0.9641088297314621 0.8777984074893068 0.8209441332509112 1.0 10.828441928935364 LSVQSNPS(ph)PQLR ddPTM_A549_MK2206_60min_R1 2 LSVQSNPSPQLR 12 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 LSVQS(0.001)NPS(0.999)PQLR;LSVQSNPS(1)PQLR 120.9 1.4075999999999999e-05 17765300.0 7737.6 8910.099999999999 8216.0 7326.7 10283.3 7955.0 7566.1 6835.700000000001 12590.599999999999 11586.8 12604.0 True False 9043.517713842595 9363.586031885849 9381.152343066105 9121.741828908067 8770.640192205134 8796.79281989837 8940.762432815276 7804.681408453275 9738.849203056716 8969.333832617913 9474.078947296466 0.9545537633949381 0.9883373448727543 0.9901914893524422 0.9628104092916661 0.925751225105416 0.9285116652324955 0.943707824533869 0.8237931572947709 1.0279468069912807 0.9467235688570457 1.0 13.209769978578285 LSVQSNPS(ph)PQLR ddPTM_A549_PD325901_60min_R1 2 LSVQSNPSPQLR 12 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 LSVQS(0.002)NPS(0.998)PQLR;LSVQSNPS(1)PQLR 180.61 3.0982e-17 25687000.0 11130.9 10975.7 11240.3 12106.2 13531.0 11243.1 10470.3 12590.3 13225.4 12111.3 12931.1 True False 12260.900773864516 11900.660758222499 12003.134351414834 12853.972478824944 12580.629239415883 11151.539921237923 10868.752996068008 12339.176589600722 12669.582430567383 11346.590451072609 11340.656676996683 1.081145574112516 1.049380216435061 1.058416165243933 1.133441637898964 1.1093386915534047 0.9833240030850804 0.9583883284390504 1.0880478036716719 1.1171824340883438 1.0005232302012952 1.0 13.46921656103039 LSYLPATVEPAS(ph)PTPAHSLPR ddPTM_A549_MK2206_60min_R1 1 LSYLPATVEPASPTPAHSLPR 21 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5 E9PCV4 SPHK2 Sphingosine kinase 2 1 LSYLPATVEPAS(0.775)PT(0.224)PAHS(0.001)LPR 97.542 2.2623e-07 7022200.0 1232.5 1215.5 1174.4 992.77 1531.9 1385.5 1158.9 1123.7 1378.0 1250.8 1510.6 True False 1440.5158682680665 1277.3637581797338 1340.9475793204517 1235.9986945671383 1306.5595392956589 1532.1126903795325 1369.4571289554224 1282.9879161869217 1065.8852002138224 968.2434112816723 1135.4763295609362 1.2686445597902356 1.124958508535059 1.1809559956559965 1.0885288071527408 1.1506708729021915 1.3493127513912746 1.2060640044209125 1.1299116351311569 0.9387119506277836 0.8527200312982929 1.0 10.149081916219004 -8.631670540044713 4.131987459922623 0.9712089002641258 1.1910964956593597 0.6885169218026748 0.07646466579463768 0.09551179658721137 2.9918657097443893 0.012132008662213235 0.013756612042235924 2.3352289175346942e-09 8.631670540044713 0.21988759539523395 LSYLPATVEPAS(ph)PTPAHSLPR ddPTM_A549_PD325901_60min_R1 1 LSYLPATVEPASPTPAHSLPR 21 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5 E9PCV4 SPHK2 Sphingosine kinase 2 1 LSYLPATVEPAS(0.956)PT(0.044)PAHSLPR 111.65 6.308e-11 16799000.0 1791.2 1723.2 1854.3 1788.0 2029.2 1613.4 1290.8 2234.5 1482.4 2077.0 2146.6 True False 1973.0413053882526 1868.4201115709266 1980.1439488117323 1898.4406991573746 1886.6759923599645 1600.2610053210656 1339.9221003528635 2189.931144568662 1420.0998831848633 1945.8578655369615 1882.5818084185476 1.0480507654781255 0.9924775131766956 1.0518235860757315 1.0084240114654828 1.0021747707977993 0.8500353069199983 0.7117470775299043 1.163259484807357 0.7543363464123827 1.0336113186876956 1.0 10.87849684386755 -7.165010589035939 5.284677386360416 0.8882106119978086 1.0221304291381952 0.12323259004427856 0.12157288523100337 0.2877332596142778 12.52914260162678 0.018393545938539885 0.03219034315009725 6.838949722440361e-08 7.165010589035939 0.1339198171403866 LSYS(ph)DSDLKR ddPTM_A549_MK2206_60min_R1 1 LSYSDSDLKR 10 1 A0A087WTF0;A2A3K4;A2A3K4-2 A0A087WTF0 PTPDC1 Protein tyrosine phosphatase domain-containing protein 1 1 LS(0.15)Y(0.001)S(0.849)DS(0.001)DLKR 56.951 0.0059237 3230900.0 1306.1 1733.8 1552.9 1364.6 2185.4 1754.1 1459.2 1350.4 2316.0 2344.6 2346.7 True False 1526.5377489208295 1822.0430143414426 1773.1245707822986 1698.9270612592227 1863.9305549818744 1939.7176977226552 1724.3177518092607 1541.8233354265542 1791.4296978920256 1814.9532316045807 1763.94962437485 0.8654089254174931 1.0329337012598538 1.0052013653228336 0.9631380838675189 1.0566801507398251 1.0996446105483868 0.9775323104367933 0.874074471357413 1.0155787178598792 1.0289144352678476 1.0 10.78459364504599 -5.253994482517009 24.250558359765005 1.0044422189133453 0.8654088235466 0.3519600635704446 0.0545837211773908 505.64658609794776 1646999.6229542557 0.007304515389047671 0.10409888020493095 5.571928277288042e-06 5.253994482517009 -0.1390333953667453 LSYST(ph)SQEFSSR ddPTM_A549_PD325901_60min_R1 1 LSYSTSQEFSSR 12 0 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 LS(0.001)YS(0.095)T(0.451)S(0.451)QEFS(0.001)SR 52.071000000000005 0.027141000000000002 3753300.0 3023.1 3041.7 3080.6 3077.4 3817.5 3497.1 3339.3 3580.4 3375.6 3603.5 3660.2 True False 3330.002886511404 3298.034733847078 3289.668041152684 3267.4840087175066 3549.371969660046 3468.6207770598116 3466.3788888350746 3508.986113230536 3233.7352709652073 3375.9743950228435 3210.0186039194823 1.0373780645524668 1.027419196206566 1.024812764990193 1.017901891511737 1.1057169467261678 1.0805609577541302 1.0798625542551599 1.0931357559566819 1.007388326976288 1.0516993237673846 1.0 11.648365943288358 -8.862142776134087 8.452509086312741 1.003283819791956 1.0578433885648497 0.18377531487393284 0.03152143528117449 0.18707944521983547 14.181305698117841 0.005297742180342453 0.005631128119268992 1.3735903271896498e-09 8.862142776134087 0.054559568772893696 LSYSTS(ph)QEFSSR ddPTM_A549_MK2206_60min_R1 2 LSYSTSQEFSSR 12 0 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 LSYS(0.048)T(0.224)S(0.727)QEFSSR;LSYS(0.019)T(0.075)S(0.906)QEFSSR 94.54700000000001 0.00026149 7893200.0 5053.200000000001 6569.4 5387.5 5328.5 7027.1 5950.200000000001 4933.2 5021.4 9307.1 8287.0 9474.0 True False 5906.056621121456 6903.754399823901 6151.52851123036 6633.982739205457 5993.422898743079 6579.846214576901 5829.498583624891 5733.19882739255 7199.056710384661 6414.960944428539 7121.344330901836 0.8293457452258207 0.9694453854542967 0.8638156260099475 0.9315632598213854 0.8416139734650467 0.923961250690379 0.8185952416777258 0.8050725482426584 1.0109125996261135 0.900807578787046 1.0 12.797933896142139 -8.781116792276645 24.96424867725438 1.005153194422027 0.8766411292860924 0.31653009479308925 0.05794640548193583 110.77531099362245 140537.3487251764 0.008057625147652034 0.008583717258649011 1.6553247467983717e-09 8.781116792276645 -0.12851206513593472 LSYSTS(ph)QEFSSR ddPTM_A549_PD325901_60min_R1 1 LSYSTSQEFSSR 12 0 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 LSYS(0.013)T(0.196)S(0.79)QEFS(0.001)SR 90.156 0.00027319 3471000.0 3052.2 3148.9 3504.9 3801.4 3842.1 3622.0 3907.9 3670.7 3830.0 3833.0 3821.6 True False 3362.0570970891185 3414.2688540655104 3742.7635906758574 4036.2038443942047 3572.244150525441 3592.503632870273 4056.617272984935 3597.485008891555 3669.03841918377 3590.983725856127 3351.567427118384 1.0031297803785357 1.0187080905607906 1.116720362058721 1.2042735025219107 1.065842841657162 1.0718876200438079 1.2103642135204602 1.0733739025458326 1.094723140431742 1.071434128640995 1.0 11.710620243060179 -10.459516978660606 0.7818335485252522 0.999591971106673 1.0983323773538816 0.07619603603487679 0.06494402268100104 0.7517303783134613 0.8247426025320611 0.043035794885033826 0.012334386582570018 3.471227049259455e-11 10.459516978660606 0.09874040624720859 LT(ph)HLSLSR ddPTM_A549_MK2206_60min_R1 1 LTHLSLSR 8 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 LT(0.497)HLS(0.497)LS(0.005)R 53.123999999999995 0.022877 1109400.0 0.0 0.0 0.0 0.0 202.98 212.34 85.978 0.0 0.0 144.83 0.0 True False 0.0 0.0 0.0 0.0 173.12191088598007 234.80967786011558 101.59908968274162 0.0 0.0 112.11280241119654 0.0 0.0 LT(ph)PEEEEILNK ddPTM_A549_PD325901_60min_R1 2 LTPEEEEILNK 11 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 1 LT(1)PEEEEILNK;LT(1)PEEEEILNK 80.763 0.00089605 1900410.0 1635.68 1710.73 1857.5 1799.6100000000001 1919.87 1591.15 1418.72 1522.8899999999999 2044.27 1941.9299999999998 1514.35 True False 1801.733029476027 1854.8992209074563 1983.5611200548963 1910.7678224891513 1785.0249543919422 1578.1922019441017 1472.7101659533732 1492.5147642659063 1958.356441040419 1819.3162083881523 1328.094550255579 1.3566300901764117 1.3966620227080209 1.4935390855065094 1.438728757769123 1.344049604034917 1.1883131375250309 1.108889548315641 1.1238015877549428 1.4745610097289776 1.3698694931306228 1.0 10.375142143944172 -7.07476678729088 3.379679928930148 1.2093325279967417 1.423304666383715 0.3905703206594152 0.12378902607068083 0.2790442639828627 6.184421207122155 0.025915503653088767 0.04772768536689823 8.418470855298507e-08 7.07476678729088 0.21397213838697327 LT(ph)PSPDIIVLSDNEASSPR ddPTM_A549_MK2206_60min_R1 1 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LT(0.59)PS(0.41)PDIIVLSDNEASSPR 101.15 2.5599e-09 1696900.0 474.05 699.7 783.16 617.24 877.4 837.56 815.93 938.2 1095.8 1037.9 1036.0 True False 554.058050590245 735.3117413396627 894.2238642886622 768.463827708956 748.3356222847519 926.1900432726685 964.1739194310103 1071.1927231169982 847.6030496330231 803.4376691471439 778.7326078545815 0.7114869019247597 0.9442416227637573 1.1483066912431734 0.9868134709628815 0.9609660809586827 1.1893556709078026 1.2381322031542021 1.3755590973237246 1.0884391395503272 1.0317247037601587 1.0 9.6049842272473 -5.3795344386579504 2.6140224737161963 1.0840002608951982 0.6801022938796772 0.4855040144971693 0.12061786713843975 0.2816119506292749 2.873109165009868 0.018415865191213077 0.21796988771369655 4.173165048138705e-06 5.3795344386579504 -0.40389796701552094 LT(ph)PVRPAAAS(ph)PIVSGAR ddPTM_A549_PD325901_60min_R1 2 LTPVRPAAASPIVSGAR 17 1 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 2 LT(1)PVRPAAAS(0.871)PIVS(0.129)GAR;LT(1)PVRPAAAS(0.898)PIVS(0.102)GAR 99.071 3.8608000000000003e-07 34943000.0 5821.7 4991.3 4393.5 4964.700000000001 5813.6 6612.2 5495.8 5348.1 5713.5 6355.8 6848.8 True False 6412.714698290976 5411.934367968876 4691.6693302617405 5271.35824334822 5405.272791831211 6558.352435467919 5704.945676417151 5241.4279499967115 5473.381464231454 5954.49370331239 6006.44101812026 1.067639668639893 0.9010218116921695 0.7811063683315776 0.877617582099876 0.8999127395948047 1.0918865956866388 0.9498046612305762 0.8726345491755179 0.9112520122514032 0.9913513984985193 1.0 12.552294692173904 -7.048892394024425 24.999839904838044 0.9591950411762946 0.8963630526172108 0.12174445407609291 0.08156338072798557 657.8231455161032 336359.4226990372 0.012356407648423905 0.02140219255267532 8.935268471666149e-08 7.048892394024425 -0.06283198855908378 LT(ph)PVRPAAASPIVSGAR ddPTM_A549_MK2206_60min_R1 1 LTPVRPAAASPIVSGAR 17 1 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 LT(0.999)PVRPAAASPIVSGAR 62.273999999999994 0.0012663 8021500.0 622.67 765.81 584.35 506.98 928.12 706.69 837.93 793.1 949.39 661.87 989.26 True False 727.7614731801029 804.7864579610223 667.2196168050972 631.190122759197 791.5947774731293 781.4714667371438 990.1710346583975 905.5243537668841 734.3546808642967 512.3531073113213 743.5994398129562 0.9787009432970564 1.0822849169486424 0.8972836463848446 0.8488308206875002 1.0645446124492048 1.05093068242993 1.3315919588474454 1.217758251666594 0.9875675552539618 0.6890176079747959 1.0 9.538381873185193 LT(ph)PVRPAAASPIVSGAR ddPTM_A549_PD325901_60min_R1 2 LTPVRPAAASPIVSGAR 17 1 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 LT(1)PVRPAAASPIVSGAR;LT(1)PVRPAAASPIVSGAR 124.4 1.4474e-10 55139000.0 2225.84 2145.0 2026.52 2144.2200000000003 2511.45 2493.69 2427.88 2500.62 2366.67 2377.2 2928.6 True False 2451.8056382231975 2325.766677878156 2164.0518336547234 2276.663599523057 2335.054416032148 2473.3822154202853 2520.2743019869126 2450.74317240156 2267.2070902166206 2227.10318630451 2568.4007659249773 0.9546039974568418 0.9055310638176671 0.8425678197753407 0.8864129109941086 0.9091472199398786 0.9630047803421861 0.9812620893995363 0.9541903292179387 0.882731044273036 0.8671166960590929 1.0 11.326654618703753 -7.10348885730068 4.524428497439434 0.9482475570124494 0.8942968127443834 0.17423938949243678 0.04412924607142349 0.2843361094470797 9.631455362117224 0.007286626962973374 0.012939396017620083 7.879726482167334e-08 7.10348885730068 -0.05395074426806601 LT(ph)PVSLSNSPIKGADCQEVPQDK ddPTM_A549_PD325901_60min_R1 1 LTPVSLSNSPIKGADCQEVPQDK 23 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LT(0.284)PVS(0.267)LS(0.238)NS(0.212)PIKGADCQEVPQDK 45.07 0.012473999999999999 5007700.0 1902.1 2261.8 2180.0 1743.0 2212.1 2371.3 2151.6 2316.0 2496.8 2312.2 2018.7 True False 2095.1997917479894 2452.409823787791 2327.9479094049384 1850.6611513597893 2056.7297273307113 2351.9889190020103 2233.4803154006954 2269.8055631331467 2391.868178855885 2166.2072973974805 1770.4126975936456 1.1834527591198347 1.3852192921577662 1.3149182179777053 1.045327540790471 1.1617233259376356 1.328497543086336 1.2615591372771184 1.2820770920917357 1.351022946292085 1.223560642296455 1.0 10.789869988117497 -10.892718207205093 1.1213595630745152 0.9987507020726104 1.2636207496587155 0.09346685884868 0.11237413420600546 0.33833147744589837 0.7496743609870276 0.0701553657676534 0.016474823278367776 1.2802117025069435e-11 10.892718207205093 0.2648700475861051 LT(ph)PVSPESSSTEEK ddPTM_A549_MK2206_60min_R1 2 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 LT(0.645)PVS(0.184)PES(0.134)S(0.029)S(0.006)T(0.001)EEK;LT(0.971)PVS(0.025)PES(0.003)S(0.001)STEEK 112.02 8.4024e-06 10865100.0 3657.3 3942.1 3137.6 3119.6000000000004 5801.2 4030.3999999999996 3672.1 4202.7 6078.700000000001 5007.2 5474.0 True False 4274.56282759984 4142.736051929518 3582.558859737611 3883.902140044165 4947.851164803172 4456.8942528370035 4339.273037567699 4798.445595228958 4701.884155689235 3876.070042348568 4114.654725285693 1.0388630670105725 1.006824710338697 0.8706827422776922 0.9439193320830813 1.2024948616945321 1.0831757584538393 1.0545898325080996 1.166184264682327 1.1427165751709019 0.9420158679485412 1.0 12.006555658925702 -6.721544317277793 24.99698609510343 1.0844651125852331 0.9613125099654369 0.3444850527363671 0.07915714401875956 134.02264493295715 83973.70145228461 0.011154725754726714 0.02322018645606201 1.8986970809947885e-07 6.721544317277793 -0.12315260261979621 LT(ph)PVSPESSSTEEK ddPTM_A549_PD325901_60min_R1 1 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 LT(1)PVSPESSSTEEK 193.16 5.912099999999999e-27 9564600.0 4013.3 4236.3 3665.7 4393.6 4974.3 4022.2 3672.7 3744.1 3724.3 4340.0 4213.5 True False 4420.727261564693 4593.307868296145 3914.4764456448097 4664.982693410425 4624.922328403401 3989.444536756157 3812.4666082785543 3669.4209883103695 3567.780622602119 4065.9716593309677 3695.2662115771695 1.1963217285170615 1.2430248878701715 1.0593219057887793 1.2624212780110835 1.2515802823389675 1.0796095080395927 1.031716360876572 0.9930058561989857 0.9655002964128425 1.1003190099247486 1.0 11.85146258632383 -7.58870375432935 2.3084812149410685 0.985773270645047 1.1995380925225216 0.6418168239820996 0.06373193040857297 0.10026932719829075 1.0825077247645691 0.008245056920284995 0.013121186875841906 2.5780791447028537e-08 7.58870375432935 0.2137648218774746 LT(ph)QGIGR ddPTM_A549_MK2206_60min_R1 2 LTQGIGR 7 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LT(1)QGIGR;LT(1)QGIGR 80.23100000000001 0.016915 8647200.0 1622.15 1580.55 1570.6100000000001 1734.3600000000001 2085.2 1374.2399999999998 1072.84 1682.36 2485.5 2069.21 2193.6000000000004 True False 1895.9292622401995 1660.993243925116 1793.346115085571 2159.27827785838 1778.4698422477377 1519.6611646533158 1267.761140934105 1920.839682011417 1922.5382185279068 1601.7740238712415 1648.8685797198941 1.1498364912516408 1.0073533235785728 1.0876222260176855 1.3095514733049212 1.078600116541647 0.9216387426774014 0.7688673048457684 1.1649440747653306 1.165974197200424 0.9714382598905166 1.0 10.68726070045261 -6.988605577351426 24.974043000309802 1.0497587138386453 1.1341385872100342 0.1500033914282397 0.12790366383379578 498.8257261535744 1093307.2821567198 0.020197559797489186 0.03814680761518826 1.0265838379423269e-07 6.988605577351426 0.08437987337138897 LT(ph)QGIGR ddPTM_A549_PD325901_60min_R1 2 LTQGIGR 7 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LT(1)QGIGR;LT(1)QGIGR 83.869 0.01517 16844500.0 3895.6000000000004 4052.3 3807.6000000000004 3791.3 4737.6 4223.2 3779.2999999999997 4131.8 4466.1 4054.2 4831.6 True False 4291.078444210851 4393.801542548089 4066.006632958827 4025.479990332973 4404.847319832729 4188.807659397497 3923.1233296123114 4049.3880076656023 4278.405348281109 3798.2171201059014 4237.343830035894 1.0126812022649816 1.0369235348340542 0.9595649529635608 0.9500007910141373 1.039530304010146 0.9885456142845068 0.9258449365859176 0.9556430089439545 1.009690390936453 0.896367458591088 1.0 12.048944482460428 -8.863081135618144 20.673856324993128 1.0045768927978151 0.9834889349986253 0.0 0.0471191771620309 7.737128705434098 1551.609617383376 0.006130408487360948 0.006526241512544339 1.3706256796729858e-09 8.863081135618144 -0.021087957799189816 LT(ph)RPAASPAVGEK ddPTM_A549_PD325901_60min_R1 1 LTRPAASPAVGEK 13 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 LT(0.622)RPAAS(0.378)PAVGEK 43.023999999999994 0.030431 7116000.0 1912.0 1855.4 1817.7 2258.1 2411.7 2134.6 2148.3 2219.0 2554.5 2131.9 2523.9 True False 2106.1048324599924 2011.7610695268665 1941.0600527180532 2397.5777084828114 2242.3105119133306 2117.216525324374 2230.0547320948685 2174.740304228176 2447.1432485130413 1997.2914701676698 2213.476300320308 0.9514919279484592 0.9088694869855839 0.8769283196920455 1.0831729746263208 1.013026663799766 0.956511946849395 1.007489771529138 0.9824999273375881 1.1055655974987941 0.9023324396464717 1.0 11.112098211251963 -6.316819217290131 0.6077937745784376 1.0425292726628106 0.893195931912053 0.000839662426172616 0.06855319690304146 1.156770848691 0.5670227206350694 0.011507169012147355 0.09510872052263117 4.821484586265046e-07 6.316819217290131 -0.14933334075075755 LT(ph)RTSGETTQTHTEPTGDSK ddPTM_A549_MK2206_60min_R1 1 LTRTSGETTQTHTEPTGDSK 20 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LT(0.332)RT(0.332)S(0.332)GET(0.003)T(0.001)QTHTEPTGDSK 128.98 5.9014e-17 17958000.0 1621.1 1647.5 1832.2 1313.3 1969.9 1247.1 1620.0 1350.6 2146.4 2804.9 2933.2 True False 1894.7020479102334 1731.3507129585466 2092.033510584922 1635.0585589562781 1680.1303195107505 1379.067294242018 1914.3330303803475 1542.0516860390298 1660.2438270964783 2171.271141912348 2204.8054877983186 0.8593511121029778 0.7852623383514181 0.9488517341609084 0.7415885745953127 0.7620310856485123 0.6254825207366167 0.8682548374332867 0.6994048656776959 0.7530114725695688 0.984790338162911 1.0 11.106435668713866 -10.695134294253828 0.9241655626985458 1.0018578449194657 0.7807868015807418 0.4830896627465936 0.08328628731806462 0.3942737417173976 0.5912241439434426 0.058385967341201384 0.0148268964940376 2.017742332955809e-11 10.695134294253828 -0.22107104333872396 LT(ph)SPVTSISPIQASEK ddPTM_A549_MK2206_60min_R1 2 LTSPVTSISPIQASEK 16 0 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7 E9PMC9 C11orf30;EMSY Protein EMSY 1 LT(0.514)S(0.449)PVT(0.032)S(0.004)ISPIQASEK;LT(0.543)S(0.456)PVT(0.001)SISPIQASEK 80.53399999999999 0.00030031 3410200.0 1684.6 2571.3 2320.7 2046.55 2759.0 2252.1099999999997 2244.5 1882.73 3212.8 2468.8999999999996 2961.0 True False 1968.9192954842888 2702.1681870897164 2649.8101561043723 2547.9548418731215 2353.1547548252006 2490.426785370371 2652.296596721411 2149.612743118808 2485.105929787351 1911.1737752744823 2225.7019805573495 0.8846284510162684 1.2140745754348714 1.1905502979517588 1.1447870667909794 1.0572640791000847 1.1189399151932866 1.1916674468956692 0.9658133756885602 1.1165492736655798 0.8586835937468571 1.0 11.120044714738299 -11.578080038647439 0.3725893708104562 0.9206519008670486 1.1130907418078364 0.23574553943400345 0.10381270740147505 6.75819387690655 0.7403365993092279 0.5626498689793274 0.027868904430234518 2.641921817367324e-12 11.578080038647439 0.19243884094078778 LT(ph)VASPK ddPTM_A549_MK2206_60min_R1 1 LTVASPK 7 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 LT(0.551)VAS(0.449)PK 96.66799999999999 0.012440000000000001 126240000.0 10510.0 9732.1 10754.0 8825.6 13130.0 10722.0 10982.0 10158.0 15754.0 14212.0 14924.0 True False 12283.83105517029 10227.42232083998 12279.078906686087 10987.872396196235 11198.59439320583 11856.59492331242 12977.287246689477 11597.92760757031 12185.744153968471 11001.49932933733 11217.958918553832 1.095014801208941 0.9117008178666475 1.0945911815006941 0.9794894486574517 0.9982737924529236 1.056929786371594 1.156831411213837 1.0338714637640571 1.0862710625383 0.9807041913071646 1.0 13.453522584377525 -7.270030919661384 23.461750933602623 1.051801667687053 1.0123884204998486 0.07353707637720974 0.06417972777665015 558.6609879280644 1525594.6792119425 0.009185200039491715 0.014842625857391415 5.3699356367122043e-08 7.270030919661384 -0.0394132471872044 LTAEAIQT(ph)PLK ddPTM_A549_MK2206_60min_R1 2 LTAEAIQTPLK 11 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 LTAEAIQT(1)PLK;LTAEAIQT(1)PLK 184.1 1.3819e-18 31532000.0 5695.2 6739.8 7471.8 6106.4 9356.4 6806.299999999999 6896.3 6814.4 10010.6 8710.1 10298.2 True False 6656.410525728434 7082.827031986651 8531.413592614574 7602.468274126711 7980.085954348132 7526.538148343717 8149.268442846905 7780.362068224761 7743.215083643313 6742.482360572831 7740.872724139046 0.8599044013436833 0.9149907619459555 1.1021255479385825 0.9821203041382225 1.0309026176677891 0.9723113163807808 1.0527583559711973 1.0051014072305533 1.000302596307644 0.8710235397033662 1.0 12.918280513022635 -5.555235164519066 10.847981795901559 1.008116476995829 0.8736044079854116 0.4084786565948153 0.05429397939875291 0.16946786491612437 56.18489203861988 0.004285000365382189 0.01669692477681111 2.7846129305242347e-06 5.555235164519066 -0.13451206901041746 LTAEAIQT(ph)PLK ddPTM_A549_PD325901_60min_R1 4 LTAEAIQTPLK 11 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 LTAEAIQT(1)PLK;LTAEAIQT(1)PLK;LTAEAIQT(1)PLK;LTAEAIQT(1)PLK 148.96 1.3687999999999999e-11 56364300.0 16627.4 15836.3 17035.0 17833.5 19877.7 18473.9 17886.200000000004 18015.5 19172.800000000003 17788.6 19728.699999999997 True False 18315.401407555077 17170.880578499673 18191.097539776656 18935.03479218291 18481.55892634224 18323.454683402022 18566.86912870419 17656.16671961366 18367.033891208008 16665.424760178525 17302.194970533383 1.0585594162328678 0.9924105356425965 1.0513751330832375 1.0943718311133555 1.0681626786553602 1.059024864452626 1.0730932786461267 1.0204581990714536 1.0615435742394597 0.96319714282267 1.0 14.078667450488418 -10.83643163718939 0.7462331063470625 0.994292697549633 1.053801692834248 0.46730688933880815 0.0280863079936606 0.7891372998711171 0.651714315214153 0.029826826201672603 0.005039939246160319 1.4573650922472974e-11 10.83643163718939 0.05950899528461495 LTAEDLFEAR ddPTM_A549_PD325901_60min_R1 2 LTAEDLFEAR 10 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 118.18 0.00018827 4423200.0 1208.95 1080.49 878.45 928.25 1257.1200000000001 810.6800000000001 1047.07 1041.23 1245.63 962.87 1177.87 False True 1331.6817140180494 1171.5466842799842 938.0668995489757 985.585894291293 1168.8242280285629 804.0780908600976 1086.9168218286893 1020.4618508208663 1193.2805028950079 902.0742238755782 1032.9994571331185 1.2891407684897176 1.1341212971508965 0.9081000895706093 0.9541010767097474 1.1314858105273342 0.7783915909226652 1.0521949593712348 0.9878629110347765 1.1551608228398464 0.8732572100077411 1.0 10.012623780693168 -5.423411159305907 3.781362373795308 1.035158920708925 1.2823769887859202 0.33305185303973805 0.11423419071439561 0.21857341238987552 5.18718729427861 0.015113868423442724 0.1091942187362298 3.772149014285979e-06 5.423411159305907 0.2472180680769953 LTAGVPDT(ph)PTR ddPTM_A549_MK2206_60min_R1 1 LTAGVPDTPTR 11 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 LTAGVPDT(0.813)PT(0.187)R 79.089 0.0010539999999999998 9073200.0 3019.5 3220.4 3387.5 2803.6 4989.4 4102.4 3420.1 3714.0 5418.5 5173.7 5501.2 True False 3529.1177803127184 3384.3046045594556 3867.898437455749 3490.482125858387 4255.4658694182135 4536.513245047271 4041.487899508534 4240.470873647977 4191.2184015664725 4004.9575767092992 4135.100214603882 0.8534539907518993 0.8184335152524598 0.9353820310800547 0.8441106490070288 1.029108279985389 1.097074559166843 0.9773615365439662 1.025482008554946 1.013571179427381 0.9685273315904269 1.0 12.0137065783537 -6.762766839615186 24.999997275761068 1.0140630533076256 0.864853992491178 0.7624933500587949 0.041071444350146195 11.983679991463173 225695.37302051793 0.005423892563338343 0.010665455893179625 1.7267646941507212e-07 6.762766839615186 -0.14920906081644758 LTAGVPDT(ph)PTR ddPTM_A549_PD325901_60min_R1 2 LTAGVPDTPTR 11 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 LTAGVPDT(0.999)PT(0.001)R;LTAGVPDT(0.999)PT(0.001)R 162.93 1.5305e-13 33823000.0 7345.9 7257.1 7649.4 7490.8 8913.3 6967.0 7180.3 7554.900000000001 7596.1 9049.6 8898.7 True False 8091.65036023424 7868.681285794664 8168.534283578961 7953.48970315887 8287.260557215688 6910.263061901487 7453.550245710927 7404.2115927956 7276.862333149311 8478.206711585597 7804.216313506998 1.0368306099139988 1.008260274920378 1.0466821978577692 1.0191272747519209 1.0618952915070627 0.8854525277498628 0.9550671004352913 0.9487450495164906 0.9324270421047942 1.0863623419704684 1.0 12.930038051089142 -7.236611118361482 24.99850996856028 0.9594852645701079 1.0329142620747207 0.3096286785974742 0.04855156810061042 493.88610841198675 497273.0418255971 0.005177156161104299 0.008964343006451379 5.799477684021923e-08 7.236611118361482 0.07342899750461285 LTALNDSSLDLS(ph)MDSDNSMSVPSPTSATK ddPTM_A549_MK2206_60min_R1 1 LTALNDSSLDLSMDSDNSMSVPSPTSATK 29 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 LTALNDS(0.003)S(0.003)LDLS(0.187)MDS(0.187)DNS(0.187)MS(0.187)VPS(0.187)PT(0.044)S(0.011)AT(0.003)K 43.291000000000004 0.012232 1350100.0 162.62 383.63 307.15 348.83 485.47 364.3 454.76 541.99 626.27 700.52 566.93 True False 190.06628032272056 403.15512838378555 350.70848857993593 434.2933656595736 414.0580060982202 402.84998419723155 537.3840054912141 618.8187422747623 484.4208449476853 542.2720454677307 426.14563452798996 0.4460125011798911 0.9460501192986072 0.8229780154110691 1.0191195930954644 0.9716349823854037 0.9453340631857903 1.2610336982248678 1.4521297231172674 1.1367495187044272 1.2725040491576673 1.0 8.735202743008719 -4.993995108259904 0.6947194304905472 1.0999032342644177 1.3487542135972582e-12 0.610818473401676 0.15782419559877212 2.3164306580762566 0.6031546623574935 0.026345271171388816 2.1765508722042393 1.0139228061417703e-05 4.993995108259904 -1.099903234263069 LTALNDSSLDLSMDS(ph)DNSMSVPSPTSATK ddPTM_A549_PD325901_60min_R1 1 LTALNDSSLDLSMDSDNSMSVPSPTSATK 29 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 LTALNDSSLDLS(0.003)MDS(0.312)DNS(0.312)MS(0.312)VPS(0.056)PT(0.003)S(0.001)ATK 82.65 8.857700000000001e-07 4059400.0 731.91 931.75 781.61 853.25 848.17 960.02 687.35 880.53 905.37 799.22 771.88 True False 806.2129643963355 1010.2718424769093 834.6547548027493 905.9533146286512 788.5974652276519 952.2019154136163 713.5074803823519 862.9671383875782 867.3204474089848 748.7571128042613 676.9436533504646 1.1909602230644536 1.4924016754964322 1.2329752272167844 1.338299443601733 1.164938117559073 1.4066191635017016 1.0540131026429131 1.2747990680116565 1.2812298972244873 1.1060848404418346 1.0 9.402891943198386 -14.23213291682492 0.2204225626281314 1.0527593565713591e-14 1.3168211998187336 0.3369702052654604 0.1155172865355315 19.80734144743172 0.32854006534043895 8.654926839795749 0.07191699754034682 5.85958803029253e-15 14.23213291682492 1.3168211998187231 LTALNDSSLDLSMDSDNSMSVPS(ph)PTSATK ddPTM_A549_PD325901_60min_R1 1 LTALNDSSLDLSMDSDNSMSVPSPTSATK 29 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 LTALNDSS(0.001)LDLS(0.189)MDS(0.189)DNS(0.189)MS(0.189)VPS(0.218)PT(0.019)S(0.006)AT(0.001)K 56.637 0.00088559 3635800.0 650.31 580.37 463.03 667.51 1013.3 586.62 1040.8 675.21 833.65 786.49 671.83 True False 716.3289924670804 629.2798167086924 494.45400022558186 708.740576674798 942.1293036952261 581.8427612132409 1080.408213547613 661.7424068580024 798.6145895959665 736.8308871767771 589.1991690812596 1.2157671464202076 1.0680256350156274 0.8391967032074839 1.2028879432738167 1.5989997154345819 0.9875145651011532 1.8336893027739627 1.1231217584536985 1.3554238218652772 1.250563350803295 1.0 9.202611585587741 -4.889312346755946 18.271807995909867 1.2004112142590333 2.8332036960199507 0.0 0.2740154894036655 7879.017155204576 1352082.2447411232 0.03648328965072626 21207.933283599705 1.2902909561416938e-05 4.889312346755946 1.6327924817609174 LTANETQSASST(ph)LQK ddPTM_A549_PD325901_60min_R1 2 LTANETQSASSTLQK 15 0 O95819-6;E7EN19 O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 LTANETQSASS(0.013)T(0.987)LQK;LTANETQSASS(0.143)T(0.857)LQK 254.18 1.0462999999999999e-76 10411400.0 3803.0 3330.6000000000004 4248.8 3978.4 4451.9 3850.7 4152.2 4614.0 4827.5 4279.4 5048.7 True False 4189.077760379371 3611.281350741719 4537.149118109953 4224.136732398039 4139.213902221237 3819.341175895514 4310.214243171021 4521.970150387023 4624.616963083461 4009.1979536730273 4427.741906346182 0.9460979996090696 0.8156033994587063 1.02470948263876 0.9540160248147436 0.9348363092908816 0.8625934520757271 0.9734565235144552 1.0212813316660996 1.0444639865876335 0.9054723690933147 1.0 12.112355414350112 -8.031252177881854 4.508616930036717 1.0210584591434746 0.9240052708874281 0.1748470592075837 0.061540044672462456 0.14398936847677632 6.9305893208078055 0.00804923143352359 0.010735731705654351 9.30567374347543e-09 8.031252177881854 -0.09705318825604647 LTATPT(ph)PLGGMTGFHMQTEDR ddPTM_A549_MK2206_60min_R1 2 LTATPTPLGGMTGFHMQTEDR 21 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LT(0.296)AT(0.264)PT(0.44)PLGGMTGFHMQTEDR;LT(0.024)AT(0.095)PT(0.88)PLGGMT(0.001)GFHMQTEDR 78.413 0.00017927 3008900.0 1312.93 1448.56 1116.36 1328.3 1761.9499999999998 1348.1399999999999 1130.95 1369.12 2208.3 2174.8 2091.6 True False 1534.5204859433604 1522.2855166999889 1274.6766345795133 1653.733559629653 1502.769489041051 1490.7992799770943 1336.4289757460829 1563.1969527541507 1708.123575930467 1683.511169535803 1572.197994776682 0.9760351374581969 0.9682530583027599 0.8107608830531366 1.051860875744567 0.9558398458932694 0.9482261680335309 0.8500385957659944 0.9942748673815668 1.086455765498602 1.0708009901608684 1.0 10.618567199520225 -8.519496476481015 24.55733549848636 1.0408020763443602 0.9379392123585002 0.38617780876880525 0.06347832681861665 92.23425689463022 669680.6053685981 0.010774182049325828 0.012342277274294112 3.0234551003146722e-09 8.519496476481015 -0.10286286398585998 LTATPT(ph)PLGGMTGFHMQTEDR ddPTM_A549_PD325901_60min_R1 1 LTATPTPLGGMTGFHMQTEDR 21 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LT(0.049)AT(0.409)PT(0.541)PLGGMT(0.002)GFHMQTEDR 55.17100000000001 0.0016649999999999998 6044800.0 3205.2 2838.5 2793.2 3755.9 3827.6 3798.1 3130.2 3289.8 4299.1 3643.1 4090.1 True False 3530.589544456469 3077.710356716616 2982.7633488760875 3987.893412732205 3558.7625805031544 3767.169532856042 3249.321473911164 3224.182358201826 4118.423777522965 3413.074044264666 3587.0436292801164 0.9842616676410548 0.8580075055664381 0.8315380734509489 1.1117493470611997 0.9921157778661762 1.0502156991082028 0.905849443086721 0.8988411325370155 1.1481387468792765 0.9515005662057241 1.0 11.808579577591555 -6.577594235396895 0.4832621793768777 1.0566527906341716 0.876983075611128 0.0 0.0971492176499387 1.9774436878898634 0.6356975717363026 0.023954475221047582 0.1629494118880731 2.644878733390607e-07 6.577594235396895 -0.17966971502304363 LTDS(ph)VLR ddPTM_A549_MK2206_60min_R1 1 LTDSVLR 7 0 Q6UXN9 Q6UXN9 WDR82 WD repeat-containing protein 82 1 LT(0.036)DS(0.964)VLR 69.598 0.021897 1974500.0 498.21 551.36 596.09 553.19 1034.8 641.94 625.02 824.88 1042.7 799.91 885.64 True False 582.2956679349562 579.4218689510309 680.6245253381547 688.7215748336429 882.5822907912711 709.8696647147151 738.5780436100767 941.8092660890526 806.5301148497479 619.2097754383775 665.7111455794701 0.8746971893163894 0.8703803035273978 1.0224021782686292 1.0345651855267397 1.3257736431962919 1.0663328523616757 1.1094572300831458 1.4147416223131613 1.2115316383169483 0.9301478269518602 1.0 9.378752512361018 -6.029438782219078 1.8265687565467867 1.136805288728383 0.8644638038355249 0.3764547974669892 0.13279737063876637 0.3078263154618664 1.9286156781120527 0.019415289592525163 0.08530991853393569 9.344610798134323e-07 6.029438782219078 -0.27234148489285814 LTEDKADVQSIIGLQR ddPTM_A549_PD325901_60min_R1 1 LTEDKADVQSIIGLQR 16 1 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 0 113.69 2.034e-07 3399200.0 2125.1 1722.4 2309.5 2065.1 2739.5 2251.0 2238.9 2379.6 2346.3 2024.7 2601.3 False True 2340.8385875840636 1867.5526927633261 2466.2365581517 2192.656536817613 2547.086970761939 2232.6686023166717 2324.10256467309 2332.137011239912 2247.6931704780386 1896.860096462536 2281.3565909993335 1.0260730816126709 0.8186149855447441 1.0810394867167088 0.961119601147988 1.1164791075673988 0.9786583172158394 1.0187370855754874 1.0222588702007058 0.985244121566042 0.8314614663688453 1.0 11.155676251635747 -5.773891010936958 24.999550195183684 1.0061087360803407 0.922343978759025 0.11262992184294751 0.08173564465239035 196.4979290425367 394517.93567038816 0.007520679011211399 0.023615600240897764 1.6830963922092202e-06 5.773891010936958 -0.08376475732131572 LTEELQTVENGYHDNPTLEVMET(ph)SSEMQEK ddPTM_A549_PD325901_60min_R1 1 LTEELQTVENGYHDNPTLEVMETSSEMQEK 30 0 O00592-2;O00592 O00592-2 PODXL Podocalyxin 1 LT(0.002)EELQT(0.006)VENGY(0.001)HDNPT(0.029)LEVMET(0.321)S(0.321)S(0.321)EMQEK 40.454 0.014512 1907600.0 509.84 595.56 297.8 378.15 543.5 447.84 516.63 329.11 763.55 689.52 533.26 True False 561.5985814756293 645.7499313180014 318.0104988168763 401.5074666590387 505.3264349732115 444.1929395208788 536.2906373607835 322.5456428681995 731.46064881665 645.9835895257806 467.6724006136562 1.200837553678019 1.3807740856006914 0.6799856018862753 0.8585229022114643 1.0805136978580467 0.949795067953617 1.146722869806065 0.6896828687024749 1.564044933711855 1.3812737050083637 1.0 8.869354481322494 -8.763348891222046 24.999967179966685 1.2663545267385 1.0018939582837143 0.25842327754893335 0.2349906327093261 68.7813838956197 900505.811758621 0.04728734724789119 0.05159657049706104 1.7244519938955698e-09 8.763348891222046 -0.2644605684547856 LTENLS(ph)ALRR ddPTM_A549_PD325901_60min_R1 1 LTENLSALRR 10 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 LT(0.003)ENLS(0.997)ALRR 40.577 0.040945999999999996 2264700.0 489.79 417.66 440.8 544.44 490.3 567.64 440.23 541.94 725.63 624.26 724.6 True False 539.5131202356591 452.8576739778974 470.71533874573225 578.0688222870476 455.8630194431752 563.0173280404423 456.9831935530995 531.1305815562943 695.1342945462975 584.844117063122 635.4787936178508 0.8489868201016615 0.712624368469841 0.7407254867875259 0.9096587141736676 0.717353630084014 0.8859734324651852 0.7191163546960299 0.835795917803188 1.0938748885526477 0.9203204307315119 1.0 9.3117001720422 -8.678321732156546 5.346862819894691 1.0441421711455263 0.790686362864499 0.5798420147448029 0.07753926157064207 0.07274694976748756 3.522691035357719 0.011425776793053273 0.012910580948825004 2.0973855318875344e-09 8.678321732156546 -0.2534558082810273 LTEPQHGLGS(ph)QR ddPTM_A549_MK2206_60min_R1 1 LTEPQHGLGSQR 12 0 E9PNJ4;G0XQ39;Q13586;H0YDB2;Q13586-2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 LTEPQHGLGS(1)QR 41.378 0.029299000000000002 2678300.0 497.25 506.42 565.14 461.67 660.02 645.87 412.93 392.36 619.67 626.92 829.29 True False 581.1736434047027 532.1946149052911 645.2853499464923 574.7791707251536 562.9319323232072 714.2155347061919 487.9540359475041 447.9782315521055 479.31573440965144 485.2983365851503 623.3544057603527 0.9323326153374998 0.8537592900400421 1.0351821435502468 0.9220744498052464 0.9030688274939781 1.1457615894043596 0.7827874984733757 0.7186573599422506 0.7689297291883156 0.7785271622379809 1.0 9.28390882502513 LTEPQHGLGS(ph)QR ddPTM_A549_PD325901_60min_R1 2 LTEPQHGLGSQR 12 0 E9PNJ4;G0XQ39;Q13586;H0YDB2;Q13586-2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 LTEPQHGLGS(1)QR;LTEPQHGLGS(1)QR 102.63 6.387e-05 16914800.0 3283.5 2811.6 3070.2 3307.6 3445.4 3277.5 3263.1 3400.0 3287.3999999999996 3799.8 3775.0 True False 3616.8385028150565 3048.5433993110596 3278.562234612404 3511.902939895375 3203.4069899847373 3250.8091266516617 3387.279056136834 3332.1843327515994 3149.2420102414426 3559.879979522077 3310.6989316966437 1.0924697707144047 0.9208156531916248 0.9902930777617491 1.0607738765589354 0.9675923592191688 0.9819102231037692 1.0231311049479648 1.0064896873736402 0.9512317716632546 1.0752653904708076 1.0 11.692920105576079 -8.71748828217255 24.95621497165468 0.9769705192814844 1.0024981337841021 0.0 0.05330069128338383 287.8974086525574 163472.82415922912 0.0072721602435375605 0.00824583166979678 1.9165127720338996e-09 8.71748828217255 0.025527614502617757 LTEVPVEPVLTVHPES(ph)K ddPTM_A549_MK2206_60min_R1 2 LTEVPVEPVLTVHPESK 17 0 Q9H307 Q9H307 PNN Pinin 1 LTEVPVEPVLT(0.006)VHPES(0.994)K;LTEVPVEPVLT(0.008)VHPES(0.992)K 94.057 1.1633e-06 3736900.0 629.5 788.6 922.25 929.22 1104.6100000000001 838.6700000000001 1035.88 1245.22 1349.4 1185.74 1342.28 True False 735.7442102026353 828.7363716170619 1053.0389177693187 1156.8789417142705 942.1233322680184 927.4175027359099 1224.0859873520947 1421.7337483263148 1043.7630545490072 917.880510467805 1008.9548309566096 0.7292142201302133 0.821381043224027 1.0436928249512538 1.1466112319591266 0.9337616544982227 0.9191863444041468 1.2132217912981447 1.4091153584926508 1.0344992882975694 0.9097339963153205 1.0 9.978645873760925 -5.684398993027492 3.4350281272516097 1.054616276142184 0.7472110730700078 0.39545224901662623 0.14054056587993696 0.18581996554468466 4.207743217353296 0.019639858442025773 0.09032077360725584 2.068240351430778e-06 5.684398993027492 -0.3074052030721762 LTEVPVEPVLTVHPES(ph)K ddPTM_A549_PD325901_60min_R1 2 LTEVPVEPVLTVHPESK 17 0 Q9H307 Q9H307 PNN Pinin 1 LTEVPVEPVLTVHPES(1)K;LTEVPVEPVLTVHPES(1)K 144.01 8.8435e-17 5037200.0 1233.25 1556.8 1156.1100000000001 1424.15 1840.79 1474.4 1488.9099999999999 1221.27 1542.7199999999998 1532.88 1665.26 True False 1358.4486321293334 1687.9969995900747 1234.5705768541939 1512.1165110206796 1711.4992607807524 1462.3929752357617 1545.5712848128144 1196.910811782219 1477.8848433533128 1436.0936951970625 1460.443576952888 0.930161667021495 1.1558111701322695 0.8453394546265443 1.035381670941101 1.1719037200681688 1.0013347987650034 1.058288939883278 0.8195529294459213 1.011942444525529 0.9833270643658623 1.0 10.512190906558946 LTEVPVEPVLTVHPES(ph)KSK ddPTM_A549_PD325901_60min_R1 1 LTEVPVEPVLTVHPESKSK 19 1 Q9H307 Q9H307 PNN Pinin 1 LTEVPVEPVLTVHPES(0.5)KS(0.5)K 87.772 2.7664999999999997e-06 2239300.0 705.5 727.61 475.98 622.92 669.01 697.83 569.25 567.12 786.61 655.37 937.13 True False 777.1218406383502 788.928248247517 508.2828651002583 661.3963536460354 622.0210455592055 692.1471038447988 590.9131202555524 555.8083467029667 753.5515172099598 613.9898263538558 821.8689509565229 0.9455544460390014 0.9599197625477052 0.6184475815866982 0.8047467334984206 0.7568372607765184 0.8421623703380584 0.7189870350593301 0.6762736882274181 0.9168755144393123 0.7470653632057407 1.0 9.682764560716132 -8.94631272872605 5.813006729134518 0.9641960908547638 0.788748524460993 0.03369042116895138 0.11801471972166787 0.14949028597492342 10.20405388663089 0.017827616978610638 0.018687704894963172 1.1315852327996952e-09 8.94631272872605 -0.1754475663937708 LTEVPVEPVLTVHPESKS(ph)K ddPTM_A549_PD325901_60min_R1 1 LTEVPVEPVLTVHPESKSK 19 1 Q9H307 Q9H307 PNN Pinin 1 LTEVPVEPVLTVHPES(0.434)KS(0.566)K 79.568 0.0001226 1552700.0 535.35 543.29 326.6 775.49 633.26 692.91 461.54 629.03 431.64 636.34 776.1 True False 589.6983378961595 589.074954976421 348.7650400053456 823.3902560344251 588.7820022284011 687.267170693578 479.1041572643791 616.4835031855109 413.4996718685337 596.1613838015365 680.6446201032489 0.8663821331706206 0.865466261802029 0.5124040206950294 1.209721243237804 0.8650358569485014 1.009729821399785 0.7038976627651923 0.9057347769706823 0.6075118492904693 0.875877611008081 1.0 9.41075792099481 -7.7708986034090595 24.987238449495482 0.8106783213905142 0.8835838905604321 0.033928963320613015 0.18161627468398842 707.6944335867144 1869425.2322608086 0.031598060690985565 0.04397146579690512 1.6947334309262707e-08 7.7708986034090595 0.07290556916991786 LTFDSSFS(ph)PNTGK ddPTM_A549_MK2206_60min_R1 2 LTFDSSFSPNTGK 13 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDS(0.007)S(0.278)FS(0.716)PNTGK;LTFDS(0.002)S(0.002)FS(0.996)PNTGK 212.95 1.7926999999999998e-37 38969000.0 6906.9 7266.299999999999 8571.8 6441.200000000001 8491.8 8152.0 7386.299999999999 8181.8 10509.5 10263.7 10227.3 True False 8072.61586250767 7636.12363312333 9787.410133190606 8019.294289156458 7242.667469019437 9014.639229140352 8728.295100184165 9341.595205711634 8129.115030222911 7945.123041550775 7687.579150879496 1.0500855606259512 0.9933066682311454 1.2731459333424722 1.04314949241713 0.9421259055512736 1.1726239238927423 1.1353762906214246 1.2151543447384097 1.0574349701873185 1.0335012993839308 1.0 12.908313643984219 -9.318434639496079 2.105484236447177 1.018526092136183 1.1014063380583052 0.10835715549217895 0.09223372960704548 0.42683803523130887 3.8761685613958563 0.019237153534025168 0.017141921212967075 4.803583678322263e-10 9.318434639496079 0.08288024592212229 LTFDSSFS(ph)PNTGK ddPTM_A549_PD325901_60min_R1 3 LTFDSSFSPNTGK 13 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDSS(0.001)FS(0.974)PNT(0.026)GK;LTFDSSFS(1)PNTGK;LTFDS(0.034)S(0.053)FS(0.912)PNTGK 254.4 7.928499999999998e-69 37615700.0 14652.5 13422.599999999999 14434.699999999999 14366.7 16300.800000000001 15393.4 13179.7 15233.6 14947.699999999999 15337.699999999999 15303.2 True False 16140.01101339961 14553.769608618793 15414.325544902498 15254.098429856958 15155.888042707144 15268.041254065512 13681.26069570857 14929.75389747199 14319.500151026969 14369.27500445174 13421.003414977497 1.2025934659541007 1.0844024964912204 1.1485225857032795 1.1365840509982863 1.129266387473947 1.1376229319058788 1.019391790068441 1.112417114864211 1.066947061130077 1.0706557892993303 1.0 13.712204917532796 -8.956778506472896 0.10001622908005586 0.8638475814461529 1.2751523816371448 0.4648801428972522 0.041458807034304414 3.995716196947595 0.2959101535486541 0.6174998063155306 0.5331238969350807 1.1046418521068493e-09 8.956778506472896 0.4113048001909919 LTFDSSFS(ph)PNTGKK ddPTM_A549_MK2206_60min_R1 5 LTFDSSFSPNTGKK 14 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LT(0.001)FDS(0.083)S(0.075)FS(0.699)PNT(0.142)GKK;LTFDS(0.002)S(0.002)FS(0.986)PNT(0.01)GKK;LTFDSS(0.001)FS(0.92)PNT(0.078)GKK;LTFDS(0.001)S(0.001)FS(0.92)PNT(0.079)GKK;LT(0.001)FDS(0.042)S(0.429)FS(0.489)PNT(0.039)GKK 145.55 1.8012999999999999e-13 538699500.0 26879.1 29842.899999999998 29049.2 28186.6 39490.7 29579.6 31670.899999999998 27890.600000000002 44612.100000000006 44885.799999999996 44299.4 True False 31415.634949098734 31361.776140668044 33168.81336954672 35092.31826534454 33681.67034301396 32709.69363865063 37425.09257523021 31844.177961380236 34507.530580884675 34746.06660545803 33298.63637875794 0.9434510948664426 0.9418336469980654 0.9961012514826572 1.0538665267305312 1.0115029924919199 0.9823133075658614 1.1239226780801341 0.9563207814027622 1.0363046158520148 1.0434681531770906 1.0 15.023175477870476 -5.862917732385689 3.7665676479638095 1.0199886216298972 0.9419119314425675 0.3675684939205601 0.041318371250663476 0.16879997409485092 4.489344528499023 0.005191333801340119 0.018554276647962192 1.3711414744032853e-06 5.862917732385689 -0.07807669018732977 LTFDSSFS(ph)PNTGKK ddPTM_A549_PD325901_60min_R1 3 LTFDSSFSPNTGKK 14 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDSS(0.009)FS(0.733)PNT(0.258)GKK;LTFDSS(0.004)FS(0.995)PNT(0.001)GKK;LTFDSSFS(0.887)PNT(0.113)GKK 193.16 4.4840000000000006e-27 421419000.0 24013.2 23718.1 23932.199999999997 24505.2 29840.5 28704.9 25478.6 27187.1 28856.4 28840.2 30469.399999999998 True False 26451.002386416487 25716.907525679202 25556.383008009576 26018.830548652833 27744.606224136372 28471.136811479264 26448.20206542487 26644.831962632634 27643.665858834112 27019.22485010067 26721.85696144045 0.989863931409602 0.9623922305545087 0.9563849939353897 0.9736909596589008 1.0382738843401393 1.0654625108039093 0.9897591362602358 0.9971175282122434 1.0344964385792434 1.0111282643676043 1.0 14.705732646941252 -6.684158409446037 7.186041734147752 1.0181456872272971 0.9684730725537317 0.5386782288423753 0.021728272031018767 0.14814323467072224 11.557221776836576 0.0033630286421943685 0.007017833104876599 2.0693863998824367e-07 6.684158409446037 -0.04967261467356543 LTFDSSFSPNT(ph)GK ddPTM_A549_PD325901_60min_R1 1 LTFDSSFSPNTGK 13 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDSS(0.003)FS(0.325)PNT(0.672)GK 143.98 2.261e-12 24332000.0 4042.8 4573.3 4329.6 3841.6 5811.0 4193.4 4305.5 5009.0 5219.6 4936.5 4460.5 True False 4453.222079847942 4958.708040997745 4623.432691999826 4078.88690709338 5402.855406861702 4159.250340717341 4469.348158560001 4909.091565515515 5000.238363647942 4624.80854753164 3911.886777439171 1.138382149895234 1.2676000925169548 1.1818932793925216 1.0426904302592142 1.3811379812987739 1.0632338248399154 1.1425044774649025 1.2549165772965294 1.2782165354287773 1.1822449908837003 1.0 11.933648899330844 -10.930587454648295 1.1863307885145322 0.9999407269940042 1.2009611852280406 0.02930852562891395 0.10760864067011529 0.39141871773735404 0.9784095850399854 0.06400101845038231 0.015043948297389684 1.1733093873130314e-11 10.930587454648295 0.20102045823403647 LTFDSSFSPNT(ph)GKK ddPTM_A549_PD325901_60min_R1 1 LTFDSSFSPNTGKK 14 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDSS(0.012)FS(0.054)PNT(0.934)GKK 156.67 3.4725e-19 530780000.0 16847.0 17354.0 18086.0 19585.0 21472.0 18711.0 20602.0 19343.0 20282.0 21314.0 21473.0 True False 18557.295037894088 18816.48248386831 19313.42471995307 20794.72096923779 19963.880794378656 18558.62381961228 21386.020383846986 18957.18869071006 19429.61807255491 19968.23040253001 18831.95712856212 0.9854151064176194 0.999178277404299 1.0255665190879557 1.1042251650891228 1.0601065337016813 0.9854856663551299 1.135623888576677 1.006649949407436 1.0317365284931712 1.0603375032244802 1.0 14.200895320709577 -10.050614093672227 0.7821117252289116 1.0022366143024244 1.0393088303847176 0.0 0.04849183105697896 1.1393607654381734 1.394120513580257 0.02137828733018423 0.009166157233404054 8.899915972567479e-11 10.050614093672227 0.03707221608229316 LTFDSSFSPNTGKK ddPTM_A549_MK2206_60min_R1 2 LTFDSSFSPNTGKK 14 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 ; 112.08 7.883099999999999e-06 9538400.0 6206.0 6526.4 6722.700000000001 5545.2 7989.2 6640.799999999999 6599.9 6551.1 9351.6 9141.0 8668.2 False True 7253.421077867442 6858.565883491744 7676.079948482289 6903.774248933483 6813.999263229243 7343.52504819372 7799.016399510644 7479.738486902324 7233.477531436562 7076.041751299781 6515.64670985046 1.1132311803986552 1.0526301054848253 1.178099471979883 1.0595685365347152 1.0457901673716792 1.1270600410380847 1.196967353635053 1.1479656310392543 1.1101703105696128 1.0860075854944846 1.0 12.669692665111668 -10.436069222714767 0.874566265264817 1.0028698474381088 1.113881595204672 0.1557411624940903 0.05241752631333954 0.4255024651272877 0.607747502884151 0.028131823373392133 0.009181848538254414 3.6637917238086616e-11 10.436069222714767 0.11101174776656308 LTFDSSFSPNTGKK ddPTM_A549_PD325901_60min_R1 1 LTFDSSFSPNTGKK 14 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 100.4 3.1936e-05 6896200.0 4923.3 5026.8 5804.9 5134.1 6971.6 6328.4 5566.7 6233.4 5933.2 5587.9 5775.8 False True 5423.109791658097 5450.4260775561315 6198.855421699412 5451.221696612906 6481.938866714339 6276.863608574333 5778.54381471512 6109.069946992299 5683.848237258789 5235.0790403630235 5065.413215812841 1.0706154780677366 1.0760081843947864 1.2237610551392475 1.076165253329319 1.2796466133265278 1.239161217683026 1.1407842891624476 1.2060358526963695 1.1220897476864002 1.0334949622709024 1.0 12.306464247684122 -9.948334086992167 0.7842795863023978 1.0097553401354267 1.1648743930456846 0.39317457206550754 0.06826934099366828 0.4037325722015317 0.5064106942655926 0.030634641074708594 0.014342454837155984 1.1263306774917074e-10 9.948334086992167 0.15511905291025796 LTFDTT(ph)FSPNTGK ddPTM_A549_MK2206_60min_R1 1 LTFDTTFSPNTGK 13 0 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.035)T(0.482)FS(0.482)PNTGK 199.31 1.9015e-30 13735000.0 3810.1 3369.7 3570.1 3549.4 4747.0 3311.9 3857.5 4104.4 4848.2 4376.6 4723.9 True False 4453.151731998509 3541.2033368475936 4076.39386319137 4419.003159338621 4048.7225883128735 3662.3630597387046 4558.357817711228 4686.211269197832 3750.090440984509 3387.923020319291 3550.825256992523 1.254117397984895 0.9972902298906483 1.1480130865814537 1.2445003173942237 1.1402201728569599 1.031411797166457 1.283746027415628 1.3197527138147478 1.056117992176489 0.954122710952212 1.0 11.793938648942852 -8.971588430902278 19.859549828565665 1.0247567025579674 1.1711943910468665 0.38616284486800323 0.09717280365018882 16.052013069769085 11220.767824931116 0.016751964536014616 0.01753721220359133 1.0676073845344055e-09 8.971588430902278 0.14643768848889915 LTFDTT(ph)FSPNTGKK ddPTM_A549_PD325901_60min_R1 1 LTFDTTFSPNTGKK 14 1 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.046)T(0.628)FS(0.325)PNT(0.001)GKK 196.66 1.9163e-31 280100000.0 36694.0 32385.0 40149.0 39299.0 42810.0 38792.0 41095.0 41278.0 41529.0 40727.0 43334.0 True False 40419.14786730489 35114.19760516739 42873.752575549945 41726.40997549535 39803.17328648243 38476.0908134466 42658.89271304687 40454.677908035424 39783.680550987694 38155.49026948669 38004.19271685892 1.063544440173694 0.9239558873616198 1.1281321746516366 1.0979422793260711 1.0473363710953258 1.0124170009373294 1.1224785915298 1.0644793380939113 1.046823460963542 1.0039810752922704 1.0 15.213870968583251 -10.155059234423254 0.8508211255833382 1.0031345654847201 1.0561838036056366 0.1331547019198469 0.05314914538921577 0.8712621716010899 1.2450510667692747 0.024648114530506134 0.01030860917926637 6.997465494520541e-11 10.155059234423254 0.05304923812091644 LTFDTTFS(ph)PNTGK ddPTM_A549_MK2206_60min_R1 1 LTFDTTFSPNTGK 13 0 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.001)T(0.016)FS(0.983)PNTGK 202.13 1.1976e-30 12685000.0 2311.2 2718.2 2492.6 2135.5 4017.7 2800.2 3006.4 2756.5 3944.8 3156.5 3718.5 True False 2701.274056585116 2856.544769629086 2846.088160945301 2658.6975958662388 3426.7016522150057 3096.5153053776735 3552.62396452807 3147.2423164272054 3051.3090985511526 2443.4444577155427 2795.0938246209084 0.966434125677868 1.0219852888181713 1.0182442306140864 0.9512015562578946 1.2259701703143222 1.1078394857809992 1.2710213636602712 1.125988075500134 1.091666072771276 0.874190496287523 1.0 11.448680996368624 LTFDTTFS(ph)PNTGK ddPTM_A549_PD325901_60min_R1 2 LTFDTTFSPNTGK 13 0 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.004)T(0.007)FS(0.971)PNT(0.018)GK;LTFDTTFS(0.995)PNT(0.005)GK 165.73 3.5247e-19 48938000.0 6805.9 6757.1 6690.5 7832.0 8316.9 7270.799999999999 7680.1 8149.599999999999 7977.0 7809.200000000001 6900.9 True False 7496.82995776123 7326.544531044515 7144.5575632448345 8315.764852237446 7732.749635747382 7211.589015426056 7972.370408211976 7987.049834762483 7641.7544307647395 7316.1257792735905 6052.133048409364 1.238708716050379 1.2105722845881741 1.180502395783018 1.3740221481784864 1.2776899605304812 1.191578069705758 1.3172827405549672 1.3197082368937112 1.2626547317516694 1.2088507838069475 1.0 12.56322798837181 -10.537163487115112 0.7803391884201193 0.9944629235496725 1.2645450074178661 0.2409790630770281 0.0819104820981984 0.2713966073622018 0.28818922377319867 0.04353978754620221 0.011389047980575811 2.9029296612190445e-11 10.537163487115112 0.27008208386819366 LTFDTTFS(ph)PNTGKK ddPTM_A549_MK2206_60min_R1 4 LTFDTTFSPNTGKK 14 1 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.003)T(0.057)FS(0.933)PNT(0.007)GKK;LTFDTT(0.001)FS(0.909)PNT(0.091)GKK;LTFDT(0.047)T(0.151)FS(0.797)PNT(0.005)GKK;LTFDT(0.082)T(0.07)FS(0.843)PNT(0.004)GKK 154.51 2.8239e-19 281222000.0 28676.030000000002 32586.7 28373.989999999998 26118.61 37911.1 30058.02 28506.6 28987.8 41528.200000000004 39571.6 43913.2 True False 33515.84280237821 34245.22384095069 32397.84843849005 32517.670622508962 32334.427410530487 33238.73972550114 33685.880224592824 33096.9094214143 32122.129006908333 30632.34807633021 33008.3404973357 1.0153749718221512 1.0374718427215335 0.9815049151321337 0.9851349729361176 0.9795835514099955 1.0069800306435894 1.0205263190166076 1.0026832286247696 0.9731518920044193 0.9280184224590972 1.0 15.010542988075166 -8.639448236081023 11.934857963928025 0.98732443081602 1.003341223021355 0.19744160323180204 0.02499046148017035 0.6702982016690716 66.9813555382121 0.0033337691875675707 0.0037799623319267166 2.2937800116942815e-09 8.639448236081023 0.01601679220533503 LTFDTTFS(ph)PNTGKK ddPTM_A549_PD325901_60min_R1 3 LTFDTTFSPNTGKK 14 1 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDTT(0.003)FS(0.995)PNT(0.002)GKK;LTFDTT(0.007)FS(0.99)PNT(0.003)GKK;LTFDTTFS(0.954)PNT(0.046)GKK 189.86 1.7105000000000003e-26 298666400.0 19624.6 17876.2 20649.100000000002 19607.4 21363.699999999997 21310.1 22639.4 21119.300000000003 20766.8 20723.2 22767.399999999998 True False 21616.87494513306 19382.690110529355 22050.472099125454 20818.504566363707 19863.18741276394 21136.55761094115 23500.954755755025 20698.05899372967 19894.0436144923 19414.73361535656 19967.154134439785 1.0826217296458787 0.9707287267892457 1.1043372505995894 1.0426375449496579 0.994793112680163 1.0585663569594201 1.176980685255495 1.03660535970067 0.9963384606812153 0.9723335376006139 1.0 14.285341103482798 -8.636641238454503 4.9825901090943 0.9984211976209253 1.0594217535953374 0.2626720953311532 0.051785763479986556 0.23294450042411205 9.323766977770694 0.008597792381481903 0.009744307591905369 2.3086535313864706e-09 8.636641238454503 0.06100055597441212 LTFDTTFSPNTGKK ddPTM_A549_MK2206_60min_R1 2 LTFDTTFSPNTGKK 14 1 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 0 ; 130.2 1.0024e-08 6442100.0 4248.0 5250.6 5089.6 4904.1 7715.0 5132.5 4766.5 5318.9 7980.2 7362.1 8214.6 False True 4964.958546371395 5517.8331128741365 5811.381811741637 6105.604720153412 6580.133719998703 5675.617743322233 5632.51135142464 6072.870363448091 6172.69744176077 5698.9964967994865 6174.688108573595 0.8040824830451788 0.8936213482932991 0.941162000340146 0.9888118416338697 1.0656625248588902 0.9191748058402497 0.9121936610213335 0.9835104634703525 0.9996776085240546 0.9229610300294184 1.0 12.592150550820437 -5.493544907834654 1.3737158170152437 0.9906249355161795 0.77130966557653 0.5434191507960174 0.04491429563552259 0.3879114848214114 0.8656072215041256 0.006018812262852205 0.10392371759780974 3.209630898022287e-06 5.493544907834654 -0.21931526993964945 LTFDTTFSPNTGKK ddPTM_A549_PD325901_60min_R1 1 LTFDTTFSPNTGKK 14 1 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 0 121.18 2.0435e-06 4524600.0 3116.2 2832.9 3470.3 3732.5 4679.7 4128.7 3545.2 3547.2 4138.0 4197.3 4402.0 False True 3432.5543299748056 3071.6384250634164 3705.815426609154 3963.048047877459 4351.014016088574 4095.077236066122 3680.1145260078792 3476.4483132754335 3964.0942502826215 3932.281761684302 3860.5819065771207 0.8891287409617961 0.7956413047034147 0.9599111005249501 1.0265416312307143 1.1270357996228297 1.0607409284826987 0.9532538397225075 0.9004985251971331 1.026812627269778 1.0185722921679319 1.0 11.914602606367833 -5.92513396883212 4.582058380714875 1.0125298200978778 0.8440075604736065 0.5630595280387305 0.057772445358434385 0.11283692700830754 4.458747368285085 0.008261154156491394 0.027201742989920306 1.1881356611864055e-06 5.92513396883212 -0.16852225962427136 LTGMAFR ddPTM_A549_MK2206_60min_R1 3 LTGMAFR 7 0 P04406;P04406-2;E7EUT5;O14556 P04406 GAPDH;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific 0 ;; 107.43 0.016231 44113000.0 4783.3 4731.4 4187.8 4201.799999999999 5521.799999999999 4648.4 3997.4 4203.299999999999 6597.1 6184.9 6325.099999999999 False True 5590.604099542914 4972.208050556641 4781.693011476659 5231.241188625968 4709.550534684228 5140.290602641805 4723.6758368162955 4799.130647066379 5102.867383403922 4787.726794400396 4754.403106120667 1.1758792796399087 1.0458112069116687 1.0057399224985488 1.1002939952423123 0.9905660983229005 1.081164236163391 0.9935370921189215 1.0094076038458186 1.0732929601267198 1.0070090161763585 1.0 12.215048513257232 -5.266380079948118 4.509941261631645 1.0337107033401483 1.1847335809230115 0.5622207730949075 0.036876858398329194 0.10774672432000064 5.545099692039586 0.0050142805187581956 0.0511418067623279 5.415267569243919e-06 5.266380079948118 0.15102287758286326 LTGMAFR ddPTM_A549_PD325901_60min_R1 5 LTGMAFR 7 0 P04406;P04406-2;E7EUT5;O14556 P04406 GAPDH;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific 0 ;;;; 110.63 0.016231 96177600.0 11884.599999999999 11548.2 11471.3 11113.900000000001 12729.9 13186.100000000002 11425.800000000001 12010.9 14939.500000000002 12210.800000000001 13324.0 False True 13091.115843019892 12521.40734241142 12249.811400530676 11800.380361501751 11835.795739770909 13078.71677343753 11860.615071437667 11771.33317713123 14311.64476851069 11439.808004091838 11685.232467794982 1.1203128289573687 1.0715582575632083 1.0483155927185615 1.0098541380348334 1.0128849188401587 1.1192517401329458 1.0150089101030764 1.0073683351677893 1.224763376163394 0.9789970405484405 1.0 13.512398815150625 LTGS(ph)PGVK ddPTM_A549_MK2206_60min_R1 2 LTGSPGVK 8 0 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 LT(0.001)GS(0.999)PGVK;LT(0.007)GS(0.993)PGVK 76.282 0.004682100000000001 17726200.0 7357.4 6869.299999999999 7369.3 6424.0 7413.4 5434.0 5528.2 5195.0 8108.9 8922.7 8871.0 True False 8599.149248840142 7218.918028847432 8414.37755133363 7997.8802883843155 6322.898680471598 6009.022273202729 6532.602381820139 5931.407159020253 6272.24709725244 6907.055872915722 6668.085872855203 1.2895978565372133 1.082607237893349 1.2618880008110458 1.1994267081866041 0.9482329413619565 0.9011615008835706 0.9796818017016552 0.8895217116453372 0.9406368209482477 1.0358378708098723 1.0 12.703056968402226 -6.759373425418796 24.727409426971153 0.9588004077834671 1.2032182426367377 0.7931595072466011 0.06186242056951779 14.769665049902471 176772.67963630415 0.00804823202016235 0.016122386621974048 1.7403098352478077e-07 6.759373425418796 0.24441783485327062 LTGS(ph)PGVK ddPTM_A549_PD325901_60min_R1 1 LTGSPGVK 8 0 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 LT(0.017)GS(0.983)PGVK 87.895 0.002699 8940900.0 5170.6 5075.7 4670.3 5028.2 5665.4 5100.0 4252.4 5599.6 5733.3 5419.7 6084.5 True False 5695.515505605465 5503.447052170697 4987.254642795359 5338.780494129257 5267.481848568967 5058.467290899612 4414.227409002566 5487.911585198782 5492.349339087815 5077.499217068208 5336.145072823371 1.0673464510199213 1.0313525920049258 0.9346175140917949 1.000493881120157 0.9871324292504524 0.9479628499348802 0.8272315217747601 1.0284412268227765 1.0292728672351847 0.951529455772777 1.0 12.381582174010255 LTGS(ph)QLSITQVASIK ddPTM_A549_MK2206_60min_R1 2 LTGSQLSITQVASIK 15 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LTGS(0.966)QLS(0.034)ITQVASIK;LT(0.016)GS(0.984)QLSITQVASIK 194.37 2.4113e-38 6942200.0 5201.5 6263.5 5194.799999999999 6278.299999999999 7425.8 5246.6 5583.0 5935.5 9138.099999999999 7591.4 7870.700000000001 True False 6079.38603553456 6582.285396428434 5931.500753622178 7816.483781843592 6333.474656897777 5801.791729588785 6597.358832477451 6776.875301706399 7068.334940547119 5876.497467543724 5916.187969730742 1.0275850034919098 1.1125889559469164 1.002588285559854 1.3212027443744887 1.0705330339911472 0.9806638597814592 1.115136785077116 1.145480051746028 1.1947448216167502 0.9932912033238146 1.0 12.530452175282013 -11.092228512568887 1.447238199305113 1.0004795809171714 1.1188934293813015 0.1723195264319528 0.09093822871549717 0.5728156781355762 2.1579130369057844 0.06446134185445056 0.01435588222540559 8.08670289465962e-12 11.092228512568887 0.11841384846413017 LTGS(ph)QLSITQVASIK ddPTM_A549_PD325901_60min_R1 2 LTGSQLSITQVASIK 15 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LTGS(0.99)QLS(0.01)ITQVASIK;LT(0.006)GS(0.993)QLS(0.001)ITQVASIK 219.58 3.3885000000000005e-46 10216300.0 9847.7 10554.2 9881.400000000001 10888.8 11810.7 11667.8 10789.599999999999 12408.5 11514.5 10998.9 10740.2 True False 10847.43125450642 11443.639473968122 10552.011225685304 11561.376445740947 10981.157176703064 11572.781305246765 11200.204132295668 12161.002733220066 11030.585607752362 10304.42757691598 9419.223487737292 1.1516269115631967 1.2149238723198763 1.1202633889537463 1.2274235196555727 1.1658240396354564 1.2286343264190671 1.1890793489375213 1.2910833625566103 1.1710716517250994 1.0939784569642197 1.0 13.201392414928344 -10.270752739379825 0.8006133598852568 1.0054200452392643 1.1968784205185838 0.5373861175031885 0.05075948080996216 0.23341264013291402 0.28568840191433076 0.02449817582594085 0.00874723878618575 5.361017940966907e-11 10.270752739379825 0.19145837527931953 LTGS(ph)TSS(ph)LNK ddPTM_A549_MK2206_60min_R1 2 LTGSTSSLNK 10 0 Q9NV70;Q9NV70-2 Q9NV70;Q9NV70-2 EXOC1 Exocyst complex component 1 2 LT(0.101)GS(0.855)T(0.035)S(0.098)S(0.911)LNK;LT(0.014)GS(0.898)T(0.088)S(0.127)S(0.873)LNK 88.24 0.00081535 25839000.0 10313.1 10514.7 9172.5 8757.4 11591.8 9694.5 8699.7 8493.599999999999 12983.4 12943.2 13901.5 True False 12053.699148913096 11049.853318085112 10473.298425848814 10902.96339313463 9886.661575564609 10720.365555311717 10280.322879259202 9697.593810559081 10042.68063022942 10019.322130557204 10449.373888118202 1.1535331473418846 1.057465589459834 1.0022895666273188 1.043408295068492 0.9461487053120529 1.0259337707785205 0.9838219006546196 0.92805501213676 0.9610796529779431 0.958844255917572 1.0 13.351128880174434 -2.000009419918691 0.61421165114471 0.9785581236342572 13.316536821225288 0.7576485743101091 0.02992638429903448 59.1039919468777 0.3988790784611713 0.004978455717998261 985.5901415284047 0.009999783100708752 2.000009419918691 12.33797869759103 LTGSQLS(ph)ITQVASIK ddPTM_A549_MK2206_60min_R1 2 LTGSQLSITQVASIK 15 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LTGSQLS(0.998)IT(0.002)QVASIK;LT(0.001)GS(0.007)QLS(0.988)IT(0.004)QVASIK 114.63 1.0928e-06 2342060.0 2702.3 2495.5 2915.6 2965.9 3848.2 3223.0 2891.1 2907.7 4655.200000000001 3883.4 3993.6 True False 3158.3821751081528 2622.510290857695 3329.0759215486282 3692.54563314431 3282.134877679713 3564.0557207457487 3416.3754469954447 3319.8753794577856 3600.8046328268406 3006.137242861566 3001.8789022471556 1.0521351053647905 0.8736229462469417 1.108997407942252 1.2300781455175067 1.093360186922518 1.1872749823711266 1.138079035912476 1.1059324801452128 1.1995169525763811 1.0014185584272646 1.0 11.55165006353563 -5.823944709434391 10.550559593381484 1.115694705508767 0.96306788615886 0.3647319092381589 0.07905449840466156 0.3570363646034444 58.36238663447627 0.012019572985130043 0.03747500600061669 1.499875774380698e-06 5.823944709434391 -0.15262681934990696 LTGSQLS(ph)ITQVASIK ddPTM_A549_PD325901_60min_R1 2 LTGSQLSITQVASIK 15 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LT(0.001)GSQLS(0.994)IT(0.005)QVASIK;LTGSQLS(1)ITQVASIK 140.02 1.4344999999999998e-10 5538300.0 5188.299999999999 5279.3 4759.5 4910.5 6789.1 6431.1 5808.700000000001 6481.799999999999 6663.799999999999 5840.5 6070.6 True False 5715.012396575406 5724.205138704964 5082.508291198532 5213.810432445347 6312.257037123521 6378.727253824409 6029.753257142608 6352.5154141262665 6383.743659988725 5471.729833254035 5323.954684704009 1.0734524869257294 1.0751791624280527 0.9546490517285646 0.9793115721711321 1.1856331263034514 1.1981182469773484 1.132570356856416 1.193194869290936 1.1990604800468236 1.02775665032886 1.0 12.378282576341826 -6.752498402343678 24.99944889872395 1.119913884140828 1.0198289288506626 0.35418994255766056 0.07194122565905076 239.57745048971805 669865.7958408695 0.013094915592533273 0.026941073825529006 1.7680787220236225e-07 6.752498402343678 -0.10008495529016548 LTGSTSS(ph)LNK ddPTM_A549_MK2206_60min_R1 2 LTGSTSSLNK 10 0 Q9NV70;Q9NV70-2 Q9NV70;Q9NV70-2 EXOC1 Exocyst complex component 1 1 LTGS(0.001)T(0.012)S(0.038)S(0.949)LNK;LTGSTS(0.083)S(0.917)LNK 205.07 7.195199999999999e-20 35806000.0 9416.5 9535.7 8201.2 8173.8 10540.8 9407.8 8483.2 9670.7 12326.900000000001 12119.900000000001 12875.5 True False 11005.774988678495 10021.0263997322 9364.253480520174 10176.38136693582 8990.26228331333 10403.327151607782 10024.487631680597 11041.551340276648 9534.876832014346 9382.006172363881 9678.158004277666 1.1371766180934464 1.0354270301541872 0.9675656748299885 1.0514791515532134 0.9289228672790534 1.0749284261539849 1.0357846634917363 1.1408732256072254 0.9851954088577609 0.969399979646655 1.0 13.240516777310056 -5.297628866157591 3.5567186066219967 1.0092204399792226 1.147566970010851 0.2627512434025737 0.05613498476201496 0.23035161772631169 5.113593418882295 0.007377556623143527 0.07976013653922019 5.039310678219591e-06 5.297628866157591 0.13834653003162845 LTGSTSS(ph)LNK ddPTM_A549_PD325901_60min_R1 4 LTGSTSSLNK 10 0 Q9NV70;Q9NV70-2 Q9NV70;Q9NV70-2 EXOC1 Exocyst complex component 1 1 LTGST(0.02)S(0.193)S(0.787)LNK;LTGST(0.006)S(0.023)S(0.971)LNK;LTGSTS(0.017)S(0.983)LNK;LTGSTS(0.01)S(0.989)LNK 205.53 5.962499999999999e-20 51710900.0 19920.1 20681.2 19527.4 20006.199999999997 24363.0 21175.1 19618.7 20621.5 22323.9 24207.300000000003 25169.7 True False 21942.37388759745 22424.077304677725 20852.646791795414 21241.93753662319 22651.82692778722 21002.65700618204 20365.30036426456 20210.188005246207 21385.704116453428 22678.846946756337 22073.986463874164 0.9940376616388658 1.0158598829158707 0.9446706341839265 0.962306358726246 1.026177440348563 0.9514664259015724 0.9225927721571269 0.91556584209752 0.9688193001048014 1.0274015064688056 1.0 14.430059577010448 -10.314667644306834 1.1340076897751497 0.9970038473502297 0.9667974466785779 0.1865775280368277 0.034367622273260914 0.7716211253030072 1.9620334489954232 0.013996903612003881 0.006292200217570359 4.845430355029617e-11 10.314667644306834 -0.030206400671651812 LTGVFAPR ddPTM_A549_MK2206_60min_R1 2 LTGVFAPR 8 0 P62701;Q8TD47;C9JEH7;P22090 P62701 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 0 ; 79.469 0.011326000000000001 4914500.0 2207.31 2351.0 1825.75 1817.75 3196.3 2445.6000000000004 2118.6000000000004 2258.2 2766.4 2799.4 2794.7 False True 2579.8499644517547 2470.6558580670976 2084.668803596999 2263.0988316018984 2726.128504113006 2704.3917687421063 2503.5221963974104 2578.3067654474576 2139.814817033033 2167.013595732263 2100.6988602038573 1.2280912858692175 1.176111390771802 0.9923691791762563 1.0773075924753353 1.29772456002973 1.2873771771741072 1.1917568214201164 1.2273566736725185 1.0186204493991011 1.0315679399768753 1.0 11.036653647991985 -8.774120818403427 22.666998378961647 1.008792902912103 1.1818976772837542 0.4452843868416486 0.08335334799975545 49.65674625865653 88756.70037187512 0.015583584138911801 0.01665920814038698 1.682206015248034e-09 8.774120818403427 0.17310477437165117 LTGVFAPR ddPTM_A549_PD325901_60min_R1 1 LTGVFAPR 8 0 P62701;Q8TD47;C9JEH7;P22090 P62701 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 0 98.99700000000001 0.006705199999999999 4585500.0 1604.4 1720.2 2062.5 1589.5 2140.5 1509.7 1778.9 1812.3 2097.8 2242.7 1872.8 False True 1767.2775069031443 1865.1672910424243 2202.4736528200406 1687.6798049835832 1990.15866432412 1497.4055037394396 1846.5970129514308 1776.1522547781544 2009.6367612960096 2101.0955392584233 1642.4574726573442 1.075995900243221 1.1355954854799108 1.3409623624876217 1.027533335309482 1.2116957044277241 0.91168601237314 1.1242890873538465 1.0813992351987687 1.2235548224238666 1.2792389296138336 1.0 10.681640300700925 -11.089892104578558 1.4281971551990067 1.0002222172059785 1.1371703562354936 0.0 0.13441544573964684 0.5780401016143512 2.1119764520922923 0.07480996009142789 0.016497212512921834 8.130324795547677e-12 11.089892104578558 0.13694813902951508 LTHLS(ph)LSR ddPTM_A549_MK2206_60min_R1 1 LTHLSLSR 8 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 LT(0.038)HLS(0.96)LS(0.002)R 67.207 0.0024955 2659700.0 0.0 137.08 196.6 0.0 147.61 134.84 116.86 107.59 171.33 172.33 118.71 True False 0.0 144.05678648398026 224.48083625204433 0.0 125.89676453778462 149.10867930045202 138.09194933965884 122.84121198055618 132.52402855778968 133.4005333116171 89.2310307706731 0.0 1.6144247717390074 2.515726136000468 0.0 1.4109078809292672 1.6710406459796099 1.5475776548470008 1.3766647198804913 1.4851787255308202 1.495001594842731 1.0 6.479473600479878 -5.253656844111 24.999999620739494 1.3228774942834176 0.00010625992198597551 0.32490340138167195 0.5721141928067788 885.902763786734 2845737.585126534 0.0742432232340566 1.1120750777762356 5.576261807988449e-06 5.253656844111 -1.3227712343614317 LTHLS(ph)LSR ddPTM_A549_PD325901_60min_R1 2 LTHLSLSR 8 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 LT(0.255)HLS(0.741)LS(0.004)R;LT(0.293)HLS(0.706)LS(0.001)R 79.20100000000001 0.0012722999999999999 7297800.0 570.9100000000001 944.41 571.3399999999999 512.12 618.06 868.55 694.11 967.45 481.47 754.86 903.19 True False 628.8683629182714 1023.9987451071827 610.1145681465215 543.7524892910931 574.649597791248 861.4768167668344 720.5247358815661 948.1534508001569 461.23549025702647 707.1980107747862 792.1033557931364 0.79392210412817 1.2927590037563323 0.7702461600299764 0.6864665896366913 0.7254729999418433 1.0875813244147086 0.9096347472989831 1.1970072388479744 0.5822920542928257 0.8928102697742846 1.0 9.629544879122015 -8.775334482885055 24.987341293368516 0.8027490815938053 0.9287144261018767 0.048198085014736436 0.20648682064781443 552.9682030009587 994390.2143854402 0.0402257779362405 0.04292953933192052 1.677511542506173e-09 8.775334482885055 0.1259653445080714 LTHT(ph)GERPYR ddPTM_A549_PD325901_60min_R1 2 LTHTGERPYR 10 1 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 1 LT(0.031)HT(0.969)GERPYR;LT(0.097)HT(0.901)GERPY(0.001)R 51.841 0.009650200000000001 9059100.0 2224.63 2495.77 2560.77 2259.43 2445.72 2278.95 2398.8199999999997 2099.36 2519.85 2709.65 2569.92 True False 2450.4727999139504 2706.0972968055753 2734.559251360957 2398.989859562161 2273.9410644759582 2260.390986783465 2490.108407784671 2057.4866178839393 2413.9494675144183 2538.5622365682375 2253.836132065123 1.0872453258918409 1.2006628424782857 1.2132910695931394 1.0644029640983874 1.0089203168432719 1.0029083102471767 1.1048311686719916 0.9128820807388183 1.0710403623277565 1.126329550073469 1.0 11.138166911063484 -6.418411584155004 4.627960211282925 1.026947687160216 1.1694423036360373 0.47133591900161187 0.06204277226301529 0.120410075851456 4.171792391010577 0.007493737674451968 0.017815827248270282 3.8158247084215056e-07 6.418411584155004 0.1424946164758214 LTHVDS(ph)PLEAPAGPLGQVK ddPTM_A549_PD325901_60min_R1 2 LTHVDSPLEAPAGPLGQVK 19 0 Q9BSJ8;Q9BSJ8-2 Q9BSJ8 ESYT1 Extended synaptotagmin-1 1 LT(0.01)HVDS(0.99)PLEAPAGPLGQVK;LT(0.001)HVDS(0.999)PLEAPAGPLGQVK 103.26 6.1719e-10 6357700.0 2792.3 2959.8 3028.6 3009.9 3558.0 3230.8 3124.5 2852.5 3171.1 3795.4 3585.8 True False 3075.772240417385 3209.2327334190027 3234.139008451284 3195.8146870211285 3308.0983544336473 3204.4894359683262 3243.4045572920036 2795.6046497570405 3037.829694797301 3555.7577962729847 3144.7693322590258 0.9780597288539198 1.0204986103428038 1.0284185155570886 1.016231827955863 1.0519367256921497 1.0189902970296396 1.031364852112102 0.8889696999648731 0.9659944415112617 1.130689542090748 1.0 11.618738484466027 LTIAEER ddPTM_A549_MK2206_60min_R1 2 LTIAEER 7 0 P62701;Q8TD47 P62701 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 0 ; 80.229 0.044215 9241500.0 4488.5 4044.6 4420.5 4159.6 6089.0 4815.9 3884.8 4887.0 6128.9 6060.9 6573.3 False True 5246.049066710924 4250.45286411662 5047.393370560339 5178.702186731537 5193.316166049527 5325.515341464303 4590.6178743343025 5579.747215809814 4740.713935842162 4691.738480522138 4940.968196149149 1.0617451597441059 0.8602469587700045 1.0215393360544467 1.048114859506214 1.0510725752286871 1.0778282980276739 0.9290927794095296 1.1292821557035142 0.9594706437367763 0.9495585266423586 1.0 12.27057805418854 -4.863356488994966 21.094177834090512 0.9969837036037477 50.480603938910065 0.047658826691856504 0.07208158258018213 2840.2049219984992 437166.4931144604 0.008995979813973274 20019.3722504011 1.3697569447297853e-05 4.863356488994966 49.48362023530632 LTIQEHLYPAPS(ph)SPEKEQLLDR ddPTM_A549_MK2206_60min_R1 1 LTIQEHLYPAPSSPEKEQLLDR 22 1 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 LTIQEHLY(0.006)PAPS(0.497)S(0.497)PEKEQLLDR 46.132 0.0052835 2233900.0 1076.7 1195.9 1466.4 1076.3 1378.7 955.05 1163.9 1063.3 1455.6 1506.2 1654.6 True False 1258.4206372123542 1256.7662018981036 1674.357570091545 1339.9935483169436 1175.8950563528467 1056.1127570891176 1375.3655642343745 1214.0260312196792 1125.9089241155584 1165.948373898669 1243.7171553631183 1.0118222071520298 1.0104919727758965 1.3462526932843473 1.0774101993678107 0.9454682290761921 0.8491583094556356 1.1058507622119433 0.9761271089528628 0.9052773126594331 0.9374706852525936 1.0 10.280442711487883 -6.660887270784284 4.926741565089888 0.958902189754203 1.12614032880534 0.3416531074606548 0.10205758688867543 0.17682961757550483 7.071174782087349 0.014482946292948278 0.030604372545690126 2.1832965535538524e-07 6.660887270784284 0.16723813905113694 LTIQEHLYPAPS(ph)SPEKEQLLDR ddPTM_A549_PD325901_60min_R1 1 LTIQEHLYPAPSSPEKEQLLDR 22 1 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 LTIQEHLY(0.001)PAPS(0.616)S(0.383)PEKEQLLDR 89.039 5.675899999999999e-07 4203000.0 1433.9 1785.2 1975.7 1762.5 1849.9 1920.1 1537.9 2033.2 1508.7 2141.1 2335.2 True False 1579.4684724186122 1935.6450691599453 2109.782882849236 1871.3656220720768 1719.9694058085445 1904.4633422071252 1596.4256260711709 1992.6462309854562 1445.2945856455765 2005.910580597587 2047.98520405245 0.7712304118668629 0.9451460222123619 1.0301748658508392 0.9137593466833221 0.8398348788873844 0.9299204596003277 0.7795103318677519 0.9729788218403669 0.705715345396881 0.9794556018414549 1.0 10.99998957709118 -6.639130963925548 6.448519293812982 0.8645559551416597 0.9269362551702421 0.0 0.10265253776269471 0.5653387573362811 29.852107162135862 0.017202159437135812 0.03602575917763708 2.2954563360593733e-07 6.639130963925548 0.062380300028582414 LTIQEHLYPAPSS(ph)PEKEQLLDR ddPTM_A549_MK2206_60min_R1 2 LTIQEHLYPAPSSPEKEQLLDR 22 1 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 LTIQEHLYPAPS(0.024)S(0.976)PEKEQLLDR;LTIQEHLYPAPS(0.033)S(0.967)PEKEQLLDR 139.73 3.39e-23 31293000.0 1296.42 1955.42 1633.4 1474.08 2684.3999999999996 1827.9 1694.25 1871.62 2623.8999999999996 2713.3 2931.8999999999996 True False 1515.2240015741077 2054.942525725887 1865.0406812517253 1835.2296661739651 2289.528316003177 2021.3271647381805 2002.0732942727786 2136.9278665958586 2029.5908395072913 2100.3636455313112 2203.8283136764917 0.6875417618382287 0.9324422020414881 0.8462731283002755 0.8327462056753326 1.0388868778002576 0.9171890351867485 0.9084524787381739 0.9696435304576754 0.9209387259942531 0.9530523010784911 1.0 11.10579612170397 -3.8741310867069663 0.4846066197409651 0.9611547132443948 9.148017035191413e-27 0.5683734066986957 0.059530665505096475 7.75123533675977 0.43839311349826277 0.011283654319381822 5.773479986484249 0.0001336192141711531 3.8741310867069663 -0.9611547132443948 LTIQEHLYPAPSS(ph)PEKEQLLDR ddPTM_A549_PD325901_60min_R1 3 LTIQEHLYPAPSSPEKEQLLDR 22 1 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 LTIQEHLYPAPS(0.031)S(0.969)PEKEQLLDR;LTIQEHLYPAPS(0.055)S(0.945)PEKEQLLDR;LTIQEHLYPAPS(0.137)S(0.863)PEKEQLLDR 157.66 5.3117e-33 58488400.0 5514.699999999999 6151.0 6155.7 5597.700000000001 7627.1 6737.0 6838.700000000001 7730.7 7418.6 7142.200000000001 7231.700000000001 True False 6074.548284292427 6669.366356936376 6573.462819231179 5943.457215700914 7091.398808066579 6682.136105645231 7098.950470780235 7576.505123883169 7106.822040876435 6691.240273104526 6342.246745523341 0.9577912257324475 1.0515778752449094 1.0364564929409348 0.9371217258136619 1.11812092663724 1.0535913176764684 1.119311618676932 1.1946090128440725 1.1205527514193243 1.0550267975347256 1.0 12.630778291340375 -6.773213723223779 24.984808078351183 1.076814615542366 1.002634013060088 0.38359124374538933 0.05725341013043169 268.52163026951274 569795.6423043151 0.010093189597041837 0.01918454295506303 1.6857232500029873e-07 6.773213723223779 -0.07418060248227798 LTIS(ph)SPLEAHK ddPTM_A549_PD325901_60min_R1 1 LTISSPLEAHK 11 0 Q15393;Q15393-2 Q15393 SF3B3 Splicing factor 3B subunit 3 1 LT(0.019)IS(0.532)S(0.449)PLEAHK 48.659 0.0091789 3038700.0 880.58 807.99 716.54 700.9 780.62 934.57 779.15 939.62 1007.6 1138.7 1071.6 True False 969.9758333512657 876.0821529411512 765.1687133050523 744.193001140606 725.7919441928032 926.9591717756955 808.8009796172391 920.8785419823703 965.2540760233858 1066.802287668242 939.7999934320858 1.032108789242464 0.9322006374375027 0.8141825054825848 0.7918631691226808 0.7722834105821391 0.9863366442369333 0.8606096885184611 0.979866512468663 1.0270845741319314 1.1351375772757268 1.0 9.876209947431292 -8.379845036083436 3.595336968675194 1.012611960878766 0.8792306683704073 0.4248943720001782 0.08362073789972413 0.1909436203553856 4.520926659301032 0.012889815005213016 0.015702598758374813 4.170181563458349e-09 8.379845036083436 -0.13338129250835873 LTLDKLDVK ddPTM_A549_MK2206_60min_R1 1 LTLDKLDVK 9 1 P00558 P00558 PGK1 Phosphoglycerate kinase 1 0 83.0 0.0072069000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LTLDKLDVK ddPTM_A549_PD325901_60min_R1 2 LTLDKLDVK 9 1 P00558 P00558 PGK1 Phosphoglycerate kinase 1 0 ; 82.417 0.007538899999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LTLEDQAT(ph)FIK ddPTM_A549_MK2206_60min_R1 2 LTLEDQATFIK 11 0 Q14118 Q14118 DAG1 Dystroglycan;Alpha-dystroglycan;Beta-dystroglycan 1 LT(0.006)LEDQAT(0.994)FIK;LTLEDQAT(1)FIK 122.45 8.9737e-06 2659300.0 1944.98 2816.0 2508.4 1719.2800000000002 3065.3 2511.9 1437.1 2375.4 2969.6 2415.3 2440.24 True False 2273.245073804483 2959.3223718915096 2864.1288385281196 2140.5036771814125 2614.3984305783574 2777.707590735727 1698.2024678762946 2712.120224357403 2296.990341476753 1869.6820525012986 1834.2610608021844 1.2393247190289893 1.6133594258372894 1.5614619422142337 1.1669569413665128 1.425314251306732 1.5143469215450398 0.9258237576790804 1.4785900885729435 1.2522701324053631 1.0193107690372185 1.0 10.840983269462797 -12.585887338958791 0.12018113409939984 0.30063204925501447 1.5936207218249359 0.36974251905990607 0.18410733167028004 30.492220047040107 0.47279317452793895 6.481143670994476 0.8461564022736736 2.5948524097205706e-13 12.585887338958791 1.2929886725699213 LTLEDQAT(ph)FIK ddPTM_A549_PD325901_60min_R1 2 LTLEDQATFIK 11 0 Q14118 Q14118 DAG1 Dystroglycan;Alpha-dystroglycan;Beta-dystroglycan 1 LTLEDQAT(1)FIK;LTLEDQAT(1)FIK 151.78 6.2744e-12 6462100.0 3738.7999999999997 4440.799999999999 4336.9 3753.8999999999996 5598.6 3624.2 4787.5 4372.4 4157.3 4632.6 5060.6 True False 4118.360223640913 4815.041800988954 4631.22811389829 3985.769877274533 5205.373650121477 3594.6857167996804 4969.690932320524 4285.189051918556 3982.5831384001817 4340.0968453955375 4438.1782817865005 0.9279393395578398 1.0849140109465711 1.0434975388221857 0.8980643913362896 1.1728626746436508 0.8099462185986614 1.1197591932517126 0.9655288228290005 0.8973463627506807 0.9779005190500184 1.0 12.115751906474435 -8.504143902566923 24.826790343602628 0.9504674524376321 1.0094829612487968 0.04890594923761149 0.1002754755879901 1443.2006867532702 1912485.397774272 0.015322521508058008 0.018367482086595603 3.1322476886386547e-09 8.504143902566923 0.059015508811164685 LTLEDQAT(ph)FIKK ddPTM_A549_MK2206_60min_R1 2 LTLEDQATFIKK 12 1 Q14118 Q14118 DAG1 Dystroglycan;Alpha-dystroglycan;Beta-dystroglycan 1 LTLEDQAT(1)FIKK;LTLEDQAT(1)FIKK 150.57 1.9163e-12 19967900.0 6830.299999999999 9748.099999999999 6892.1 5010.6 9010.7 7260.8 4087.8999999999996 6217.0 7490.5 8692.0 8559.1 True False 7983.0876551978645 10244.236652498446 7869.503415731007 6238.19722493438 7685.237966402115 8029.133036671032 4830.6185153653205 7098.278788763987 5793.913709870562 6728.471163143825 6433.63925085728 1.2408354500346164 1.592292674963615 1.223180708287677 0.9696218550182375 1.1945397723967908 1.247992422888982 0.7508376405658186 1.1033069328247063 0.9005655250406721 1.0458266155111602 1.0 12.651419327648327 -6.283915611880559 0.6345061032158967 0.9564253410991466 1.4801931100048307 0.43805308160630285 0.15937952834889416 0.7638711901326172 0.40936509586227643 0.027226516637697484 0.22773987344947236 5.200970472023429e-07 6.283915611880559 0.5237677689056841 LTLEDQAT(ph)FIKK ddPTM_A549_PD325901_60min_R1 2 LTLEDQATFIKK 12 1 Q14118 Q14118 DAG1 Dystroglycan;Alpha-dystroglycan;Beta-dystroglycan 1 LTLEDQAT(1)FIKK;LTLEDQAT(1)FIKK 160.48 3.4667e-14 76999000.0 12675.8 12456.5 12305.7 10473.5 15294.0 11762.3 14361.400000000001 13639.0 11764.8 13086.5 15317.099999999999 True False 13962.637884569232 13506.252971090547 13140.838802185488 11120.424307955676 14219.802201435688 11666.51172857814 14907.930935859618 13366.959445411481 11270.366369194058 12260.216156643943 13433.193803096865 1.0394131201583878 1.0054387042325585 0.9782363743725653 0.8278317480532436 1.0585570646764197 0.8684838393300455 1.109783060855027 0.9950693514397064 0.8389938040345855 0.9126806578058521 1.0 13.713514732423299 LTLEGLEEDDDDRVS(ph)PTVLHK ddPTM_A549_MK2206_60min_R1 4 LTLEGLEEDDDDRVSPTVLHK 21 1 Q9NPB8 Q9NPB8 GPCPD1 Glycerophosphocholine phosphodiesterase GPCPD1 1 LT(0.003)LEGLEEDDDDRVS(0.733)PT(0.264)VLHK;LTLEGLEEDDDDRVS(0.974)PT(0.026)VLHK;LTLEGLEEDDDDRVS(0.989)PT(0.011)VLHK;LTLEGLEEDDDDRVS(0.962)PT(0.037)VLHK 179.38 1.9778999999999997e-36 122609300.0 3218.68 3701.7599999999998 2855.01 3046.4900000000002 4643.27 3827.84 3935.09 3469.38 5379.55 4799.69 4690.09 True False 3761.914494829258 3890.163772504661 3259.893348463629 3792.880186762133 3960.251133902573 4232.899488085449 4650.044916370001 3961.175239530644 4161.090514376099 3715.436695470525 3525.4112131010543 1.06708530365176 1.1034638336793512 0.9246845690934681 1.075868872450146 1.1233444538854294 1.2006824827569738 1.3190078079656662 1.1236065809316693 1.1803135188634868 1.0539016502992056 1.0 11.783575831677316 -6.52230750203678 12.887803821488687 1.1183025446422734 1.0324795153921211 0.20738295543643326 0.08891622221395959 0.15058901548667109 1797.686728062479 0.01523245260287714 0.0325480462085998 3.003948604833369e-07 6.52230750203678 -0.08582302925015228 LTLEGLEEDDDDRVS(ph)PTVLHK ddPTM_A549_PD325901_60min_R1 4 LTLEGLEEDDDDRVSPTVLHK 21 1 Q9NPB8 Q9NPB8 GPCPD1 Glycerophosphocholine phosphodiesterase GPCPD1 1 LTLEGLEEDDDDRVS(0.968)PT(0.032)VLHK;LTLEGLEEDDDDRVS(0.959)PT(0.041)VLHK;LTLEGLEEDDDDRVS(0.986)PT(0.014)VLHK;LTLEGLEEDDDDRVS(0.971)PT(0.029)VLHK 194.37 6.948199999999999e-56 177739800.0 6047.349999999999 6437.969999999999 5945.589999999999 6222.39 7314.65 7106.53 6935.57 6945.3 6553.700000000001 7876.969999999999 7128.3 True False 6661.272520176223 6980.520325957681 6349.093491137116 6606.732898226986 6800.894218172586 7048.656775842508 7199.506911639531 6806.770543017549 6278.270780105666 7379.616769907892 6251.564290016739 1.0655369138271131 1.116603781409563 1.0156007675192789 1.0568127578528503 1.0878707956395945 1.1275028854935818 1.1516328678146337 1.088810772351399 1.0042719691984254 1.1804432342945854 1.0 12.610001516208719 -8.763682313321812 7.568748658899039 1.001932913375924 1.0896554700930836 0.0 0.06397317537100247 0.07008050721204499 26.14208604348717 0.006305443081015603 0.006903240070426092 1.7231285836903636e-09 8.763682313321812 0.08772255671715956 LTLLQVAS(ph)R ddPTM_A549_MK2206_60min_R1 2 LTLLQVASR 9 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 LTLLQVAS(1)R;LTLLQVAS(1)R 59.418 0.0093405 5315600.0 1123.44 1522.56 1443.48 1567.63 2284.5 1676.9299999999998 1714.15 1170.16 2078.7 1822.5700000000002 2071.67 True False 1313.049206529069 1600.0518006204334 1648.1871694460876 1951.6994203735856 1948.4530762588506 1854.381619543956 2025.5888666830067 1336.0337634647055 1607.877769001794 1410.8501711701613 1557.2171638166985 0.8432023721796257 1.0275071697121219 1.0584183168174335 1.253325140335611 1.2512404316705854 1.1908304523172062 1.3007748140396433 0.8579623924707597 1.0325327811446205 0.9060073340780578 1.0 10.604754436088978 -8.266159679084566 24.996957392487243 1.0039869350945756 1.1368160602296018 0.27523111131524647 0.13229612868830787 527.7439948794326 2794732.3709537075 0.02170522019397702 0.02667140953146172 5.418016470284183e-09 8.266159679084566 0.1328291251350262 LTLLQVAS(ph)R ddPTM_A549_PD325901_60min_R1 2 LTLLQVASR 9 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 LTLLQVAS(1)R;LTLLQVAS(1)R 74.962 0.0021107 8377800.0 2522.34 2755.6 2810.4 3155.5 3805.4 2901.6 2872.0 3126.5 3062.5 3248.2 2842.5 True False 2778.406099951432 2987.8240827790414 3001.13064430809 3350.408068339538 3538.121831917314 2877.970331622415 2981.2955316187026 3064.139504808199 2933.7937751306254 3043.1080976587195 2492.890520092108 1.1145319369455402 1.1985380259172578 1.2038758301336085 1.3439852417649478 1.4192848837126575 1.1544712085936606 1.1959191579374087 1.2291512523762913 1.1768642671970315 1.2207146977101433 1.0 11.283603810255885 -10.02930550295779 0.5301897602704372 0.9900919993117613 1.244182537592365 0.038161532741853854 0.10232512773588716 0.5845483429374914 0.3141570253121784 0.06776010254512106 0.022063681762499995 9.347478976296053e-11 10.02930550295779 0.2540905382806037 LTLNS(ph)PIFDKPLSR ddPTM_A549_MK2206_60min_R1 2 LTLNSPIFDKPLSR 14 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;H0YBX5 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 LT(0.014)LNS(0.985)PIFDKPLS(0.001)R;LTLNS(1)PIFDKPLSR 151.95 2.9152e-14 92614000.0 4017.2 4723.799999999999 4591.1 4214.2 6170.7 4068.98 4072.8 4009.1000000000004 6430.6 6469.599999999999 5891.5 True False 4695.205148889636 4964.2212430188665 5242.18701585331 5246.679189182626 5262.998204276859 4499.556762829672 4812.775040822886 4577.402202353821 4974.079367558061 5008.112866667662 4428.4779528718755 1.0602299929809489 1.1209768448321078 1.183744634531542 1.184759017662072 1.188444034335498 1.016050392643753 1.086778593467264 1.0336287661509904 1.1232029199405547 1.1308880658240361 1.0 12.112595221105547 -7.260331592118926 24.993535574815773 1.0572381910154662 1.150219115466845 0.3860296624898578 0.051265442598151786 81.36717853226844 1835761.4082386405 0.00843146684784697 0.014085406397578128 5.491214490604844e-08 7.260331592118926 0.09298092445137884 LTLNS(ph)PIFDKPLSR ddPTM_A549_PD325901_60min_R1 2 LTLNSPIFDKPLSR 14 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;H0YBX5 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 LT(0.002)LNS(0.957)PIFDKPLS(0.041)R;LT(0.007)LNS(0.993)PIFDKPLSR 86.96 2.2864e-05 209500000.0 5897.4 5018.6 4866.0 5608.0 6553.1 6035.4 5675.0 5938.9 5908.8 6173.7 6034.5 True False 6496.09970656358 5441.535034778229 5196.23602163506 5954.393423307917 6092.832862967719 5986.2497034304915 5890.965230479155 5820.443980523082 5660.473684405505 5783.891528389768 5292.294755847257 1.227463700767287 1.0281995402402864 0.9818493227146758 1.125106158671365 1.1512648376653583 1.1311255286407678 1.113121151079208 1.099795882323503 1.0695688629495665 1.0928891521016217 1.0 12.369677699823061 -9.758292382877213 0.7278733152361384 1.0063069356309184 1.1036365761657347 0.0602541927566802 0.06546283791258412 0.5927877206840724 0.661539866819623 0.026204829953360403 0.01356569625987575 1.7446471973598886e-10 9.758292382877213 0.0973296405348163 LTLT(ph)SDESTLIEDGGAR ddPTM_A549_MK2206_60min_R1 2 LTLTSDESTLIEDGGAR 17 0 Q9NRX5 Q9NRX5 SERINC1 Serine incorporator 1 1 LTLT(0.5)S(0.5)DESTLIEDGGAR;LT(0.008)LT(0.984)S(0.008)DES(0.001)TLIEDGGAR 188.47 1.9140999999999998e-39 7243300.0 2246.11 2432.7 1960.5300000000002 1963.73 2831.4 2582.1000000000004 1836.13 1771.96 2838.3 2687.8 3196.8999999999996 True False 2625.19845588283 2556.514039098181 2238.5626342686696 2444.84393815519 2414.9048107328986 2855.336108140738 2169.7310537483127 2023.1407563999107 2195.42958183374 2080.6241132418277 2403.0215000485623 1.09245733166756 1.063874808879786 0.9315616336447389 1.0174041048345936 1.0049451537092349 1.1882274495184646 0.9029178697337767 0.8419153787675331 0.9136121261459262 0.8658366615528744 1.0 11.230633841109341 LTLT(ph)SDESTLIEDGGAR ddPTM_A549_PD325901_60min_R1 2 LTLTSDESTLIEDGGAR 17 0 Q9NRX5 Q9NRX5 SERINC1 Serine incorporator 1 1 LT(0.004)LT(0.96)S(0.024)DES(0.006)T(0.006)LIEDGGAR;LT(0.002)LT(0.973)S(0.025)DESTLIEDGGAR 91.65700000000001 5.5625e-06 11580500.0 1665.7199999999998 2439.2 2067.85 2164.29 3074.8 2412.5 2018.75 2198.21 2093.26 2315.06 2418.26 True False 1834.8226681617466 2644.759944373145 2208.1867359922026 2297.9732778407806 2858.836655484144 2392.8533998618254 2095.5746359523873 2154.364977087615 2005.287561707734 2168.8867165093875 2120.829350613173 0.8651439436328358 1.2470404295416289 1.041190200123255 1.0835257806934782 1.3479805221752512 1.1282630538708853 0.9880920571692936 1.01581250583162 0.9455204687392536 1.0226597042719727 1.0 11.050412825884775 -7.77090070274253 6.309687228701924 0.9780647517517136 1.1302840781298091 0.21535818481934732 0.11537623550067651 0.14409235697106715 22.558061145029498 0.016750616102646772 0.023876530948338318 1.6947252387843844e-08 7.77090070274253 0.15221932637809554 LTLTGAQVR ddPTM_A549_PD325901_60min_R1 1 LTLTGAQVR 9 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3 A0A0A0MS59 SRCAP Helicase SRCAP 0 49.418 0.032538 117700000.0 2415.8 2524.1 3345.3 3374.9 3415.3 3368.8 3919.1 3398.3 3539.1 3099.7 3345.7 False True 2661.0502375820356 2736.8147653297215 3572.33217492309 3583.359908045984 3175.421110145372 3341.365609722081 4068.2434951138093 3330.5182405852233 3390.363934551774 2903.9844130018882 2934.2001101397227 0.9069082331454619 0.93272941946669 1.21748075824078 1.2212391021535847 1.0822101393739512 1.138765416228878 1.38649149424239 1.1350685418748172 1.1554644561683727 0.9897022370650802 1.0 11.518751549695715 -5.690159065994817 8.088924796588023 1.1216915541588484 0.9166359535680615 0.3870707823834819 0.10654739632077422 0.23349787446021159 23.179919401037587 0.01593592633079834 0.06210279921225134 2.0409902685596472e-06 5.690159065994817 -0.20505560059078687 LTLTSDES(ph)TLIEDGGAR ddPTM_A549_MK2206_60min_R1 2 LTLTSDESTLIEDGGAR 17 0 Q9NRX5 Q9NRX5 SERINC1 Serine incorporator 1 1 LTLTS(0.001)DES(0.879)T(0.12)LIEDGGAR;LTLTSDES(0.991)T(0.009)LIEDGGAR 163.7 1.3740000000000002e-22 4575800.0 3071.8999999999996 3117.5 2456.43 2690.6 4232.5 2786.3999999999996 2921.8999999999996 2736.3 3648.6 3613.2 4138.1 True False 3590.3616192557192 3276.16743408089 2804.788711061085 3349.7971207856244 3609.9048567588457 3081.2549985373744 3452.7714083137844 3124.1789045673004 2822.1979256169457 2796.975610523616 3110.4955642500413 1.1542731841578358 1.053262210605593 0.9017176373107402 1.0769335791010137 1.160556182188035 0.9905993867830135 1.110039007287981 1.0043990869090207 0.907314563651337 0.8992057865859658 1.0 11.602928733548568 -8.518199791940601 10.89380674930967 0.956200436488641 1.0585710881653718 0.3610602595663064 0.07345624592061054 0.17059922327846483 344.7525646890874 0.012419700108323925 0.01442694504850506 3.0324958001206033e-09 8.518199791940601 0.10237065167673087 LTLTSDES(ph)TLIEDGGAR ddPTM_A549_PD325901_60min_R1 2 LTLTSDESTLIEDGGAR 17 0 Q9NRX5 Q9NRX5 SERINC1 Serine incorporator 1 1 LTLTSDES(0.989)T(0.011)LIEDGGAR;LTLTSDES(0.817)T(0.183)LIEDGGAR 272.95 1.6680999999999997e-100 17449300.0 4647.8 4375.0 4660.2 5557.0 5303.9 4642.8 4097.3 5090.9 5216.1 5113.4 5288.9 True False 5119.641234470478 4743.696604063838 4976.469196059128 5900.243269137317 4931.372361461667 4604.990576115435 4253.22499362859 4989.358005766213 4996.885456476362 4790.539051341697 4638.398829099437 1.1037518383179818 1.0227013197536627 1.0728851440800595 1.2720431093854152 1.0631626436528556 0.9927974600255562 0.9169597420009633 1.075663863673171 1.077286719099687 1.0328001596774719 1.0 12.179411158985381 -6.993194122338947 24.999869437518026 1.0279201513267269 1.1153085174986666 0.30786500257192617 0.07015619593582954 198.55455795332918 729338.9399118217 0.010657609674734302 0.020107942529871036 1.0157945482790848e-07 6.993194122338947 0.08738836617193968 LTLTSR ddPTM_A549_MK2206_60min_R1 1 LTLTSR 6 0 P04181 P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form 0 138.48 0.025233000000000002 6146800.0 1763.1 1977.2 1907.9 1611.3 2270.9 1473.7 1764.5 1647.7 2924.5 2428.9 2533.7 False True 2060.6681763435513 2077.8310346959875 2178.4689088772925 2006.0685723340064 1936.8536182430403 1629.645955837111 2085.086809942049 1881.2665208696199 2262.105419466854 1880.209803055687 1904.5123634374058 1.081992543552883 1.091004224801021 1.1438460315087844 1.0533239956044729 1.0169813834903452 0.8556762282686391 1.0948140059215625 0.9877943335973781 1.1877609528268105 0.9872394840546712 1.0 10.895205938072365 -6.297277311142274 23.4385372608783 1.0600130844620688 1.1041533199310458 0.04804547622377564 0.08395522220436022 820.0935128381499 536351.3320052401 0.013891616065568066 0.0322827927282848 5.043391577816763e-07 6.297277311142274 0.04414023546897705 LTLTSR ddPTM_A549_PD325901_60min_R1 1 LTLTSR 6 0 P04181 P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form 0 118.69 0.050152999999999996 8657900.0 1503.0 1646.8 1453.4 1609.4 1840.8 1792.5 1499.2 1479.6 1855.4 1916.0 1945.0 False True 1655.583453549879 1785.5816154451024 1552.0364640041912 1708.808982787404 1711.50855841525 1777.9024743014813 1556.2528763937187 1450.0882172762535 1777.4239903273033 1795.023433013394 1705.7773303708534 0.9705741916443094 1.0467847025830146 0.9098704950351068 1.0017772849729991 1.0033598922569515 1.0422828599292893 0.9123423372354077 0.8501040501933448 1.042002352054282 1.0523199019318292 1.0 10.73621361634983 LTPAEEENNSFQRLS(ph)P ddPTM_A549_MK2206_60min_R1 2 LTPAEEENNSFQRLSP 16 1 Q5HYI7-5;Q5HYI7 Q5HYI7-5 MTX3 Metaxin-3 1 LTPAEEENNSFQRLS(1)P;LTPAEEENNS(0.001)FQRLS(0.999)P 161.91 1.3250999999999998e-20 13118000.0 4878.0 4587.5 4304.7 4517.9 5565.0 4266.9 3965.0 4406.4 6221.0 5759.299999999999 6676.6 True False 5701.287144350209 4820.984155203232 4915.171189288784 5624.785702816241 4746.395871910924 4718.420525861012 4685.389176208689 5031.020694034042 4811.953432895639 4458.270129992436 5018.615955214185 1.1360277804135919 0.9606202582993784 0.9793877900105257 1.1207842466950004 0.9457579369028162 0.9401836219324016 0.933601857169548 1.0024717449851823 0.9588208135145646 0.888346542109968 1.0 12.293073834125344 -5.256573081719689 24.54584849173222 0.9817091275198557 1.1360278629169036 0.39983773989436133 0.0565116837734818 270.7096935069704 1365412.75379385 0.006545908602658093 0.07309175017521413 5.5389432848729084e-06 5.256573081719689 0.15431873539704788 LTPAEEENNSFQRLS(ph)P ddPTM_A549_PD325901_60min_R1 2 LTPAEEENNSFQRLSP 16 1 Q5HYI7-5;Q5HYI7 Q5HYI7-5 MTX3 Metaxin-3 1 LTPAEEENNSFQRLS(1)P;LTPAEEENNSFQRLS(1)P 199.08 2.2015999999999997e-39 25028000.0 6636.6 6204.9 6705.1 7461.7 7325.8 7401.1 7273.2 7740.8 7552.6 7163.6 7892.299999999999 True False 7310.342746393304 6727.808699098446 7160.148407041765 7922.592262249763 6811.261080638005 7340.827895426884 7549.985606047754 7586.403671459876 7235.1904868739875 6711.289073452376 6921.597133411762 1.0561641490379436 0.9720023528416779 1.0344647729464742 1.1446190972320567 0.9840591628424681 1.0605685008726413 1.0907866292307957 1.0960481410914507 1.0453065018691214 0.9696156745465303 1.0 12.756889257580758 -10.171939564903884 0.9955424379975393 1.0043476090289378 1.053059763721915 0.21698417964469585 0.0475020403203969 0.6968124214054378 1.373863250297017 0.01875544864710909 0.008686226955942684 6.730703121804603e-11 10.171939564903884 0.04871215469297718 LTPDPYRMS(ph)PR ddPTM_A549_MK2206_60min_R1 1 LTPDPYRMSPR 11 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6 P18583-5 SON Protein SON 1 LT(0.002)PDPY(0.006)RMS(0.992)PR 46.481 0.0094745 1753400.0 560.55 1025.8 687.36 801.61 967.01 744.66 525.31 798.72 1082.5 831.87 1148.3 True False 655.1571358682882 1078.008838453946 784.8379837548583 998.0044859856397 824.7641099904013 823.4594269346974 620.7520272772224 911.9410059774125 837.3154783972883 643.9499892411939 863.1454185322541 0.759034482257182 1.2489307309156075 0.9092766605764362 1.1562414218483699 0.955533207130823 0.9540216622304023 0.7191743290867344 1.056532290385244 0.9700746368104594 0.7460504051984731 1.0 9.753459827883194 -4.981987493357883 17.636302127538897 0.9881702168789135 0.2829364762442903 0.13727490990933466 0.14796222660186598 9986014.288228234 214147284.93799722 0.01584003018717417 188850089.3845374 1.0423474460739397e-05 4.981987493357883 -0.7052337406346232 LTPEEEEILNK ddPTM_A549_MK2206_60min_R1 2 LTPEEEEILNK 11 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 ; 171.85 1.0956e-14 10430300.0 4859.7 4487.3 4665.3 4407.799999999999 5789.9 5094.9 4719.299999999999 4369.9 6235.0 5848.0 6407.5 False True 5679.898551742248 4715.684403192039 5326.909691590351 5487.7111978736575 4938.213379834152 5634.038936279091 5576.73572239134 4989.346707257483 4822.782455249044 4526.932738387608 4816.340911996359 1.1792974491475412 0.9791010415077537 1.1060076080416748 1.1393942617735124 1.0253039537824737 1.1697757777581816 1.1578781120956405 1.0359205875211632 1.0013374350716413 0.9399111942246646 1.0 12.233721797739685 -8.4773247826849 5.273996034941664 1.001301095283667 1.103452402618478 0.459155020155834 0.06014657225190741 0.1452911907453293 9.604765956838223 0.009009511765997003 0.010776423780044354 3.3317715644534187e-09 8.4773247826849 0.10215130733481104 LTPEEEEILNK ddPTM_A549_PD325901_60min_R1 3 LTPEEEEILNK 11 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 ;; 177.78 3.7724e-15 8122400.0 6847.5 6717.3 7167.1 7471.200000000001 8965.1 7527.099999999999 7536.9 7799.799999999999 7031.099999999999 7525.3 8814.7 False True 7542.653159136923 7283.390445366404 7653.502505273455 7932.679055673697 8335.422303915986 7465.801793202052 7823.7208538499335 7644.2268701752655 6735.607318308882 7050.151273724267 7730.547780987128 0.9756945268080068 0.942157095682083 0.9900336589467617 1.0261470830286696 1.0782447169418594 0.9657532693302531 1.0120525835299743 0.9888337911804692 0.8712975469700543 0.9119859903154263 1.0 12.91635493075446 -8.550518473686594 24.976318951594138 0.9387418212149324 0.9990525533765867 0.3271390161814729 0.04386400000560537 256.3583367596391 231654.0751970556 0.009503469957314376 0.010776021970677886 2.8150202694067364e-09 8.550518473686594 0.06031073216165428 LTPEELER ddPTM_A549_MK2206_60min_R1 2 LTPEELER 8 0 Q5H8X8;O95399;O95399-2 Q5H8X8 UTS2 Urotensin-2 0 ; 96.25299999999999 0.006895699999999999 8857700.0 2694.3 2574.8999999999996 2183.5 2226.6 3260.2 2920.4 2256.8 2524.0 3493.0 3234.0 3159.3 False True 3149.0319706893715 2705.9514117128733 2493.1531330434336 2772.117099955871 2780.6288987608264 3229.434789595374 2666.8313475076343 2881.7847294258186 2701.8410771748036 2503.4371538894543 2374.75861775577 1.3260429700704979 1.1394637718043497 1.0498553892603832 1.1673258407103364 1.1709101202835588 1.3599002296272547 1.1229904915674684 1.2135063782394886 1.13773292871683 1.0541859434350807 1.0 11.213565162878481 -9.95449263135036 0.6777691823464894 1.0052946423617646 1.1896668406299478 0.3507976791653111 0.08476795389174002 0.506293358236995 0.4705569240778243 0.04462279577826194 0.018636353231245007 1.110471376478144e-10 9.95449263135036 0.18437219826818319 LTPEELER ddPTM_A549_PD325901_60min_R1 2 LTPEELER 8 0 Q5H8X8;O95399;O95399-2 Q5H8X8 UTS2 Urotensin-2 0 ; 118.32 0.0034497 22430300.0 4315.200000000001 4325.4 4742.5 4972.9 4803.1 4832.299999999999 4791.200000000001 5024.6 5334.1 5550.200000000001 5531.200000000001 False True 4753.275927317662 4689.916637992617 5064.35456896923 5280.06473872467 4465.746825795462 4792.947350943959 4973.531737845241 4924.380411277556 5109.926326832416 5199.759424796942 4850.897465165687 0.9798755717784088 0.966814217713511 1.0440036313561314 1.08847172644667 0.9206021891544827 0.988053733430181 1.0252807389890615 1.01514831979846 1.0533981316914687 1.0719169931206407 1.0 12.24403596985131 -7.778068866225723 23.51963474274346 1.0249455036556778 0.9992434111340153 0.12380688048190391 0.04414422120599916 266.9444214787581 377547.4463447542 0.0069388052156353994 0.009605409699317386 1.6669828575457523e-08 7.778068866225723 -0.025702092521662556 LTPIVHS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 LTPIVHSPLR 10 0 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 LTPIVHS(1)PLR 88.552 0.00021561 5480600.0 364.1 238.38 208.12 370.95 213.87 191.89 215.18 285.78 290.48 318.45 218.22 True False 401.06316396374655 258.46911919468255 222.2442747272275 393.862739011425 198.84850901144577 190.32731146092675 223.3687926510141 280.079893709927 278.2721357714104 298.3430126529832 191.38032341055404 2.09563426801916 1.3505522124142715 1.1612702432865227 2.058010625086574 1.0390227452216745 0.9944978045241969 1.1671460716044333 1.4634727788033481 1.4540268864237091 1.5589011834459596 1.0 7.580298697878323 -2.0675254424506315 0.8183328889293635 1.2390414105624068 199.99995896599043 0.3088891033637765 0.30874192035665027 396.66234896953495 1.3577556411640173 0.04757490923948736 146262.4963576991 0.00856001562762743 2.0675254424506315 198.76091755542802 LTPLLS(ph)VRESLSEEEAQK ddPTM_A549_PD325901_60min_R1 1 LTPLLSVRESLSEEEAQK 18 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;H7C3A1 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 LT(0.01)PLLS(0.529)VRES(0.459)LS(0.002)EEEAQK 44.415 0.013909999999999999 1946500.0 1709.6 1284.0 1474.9 1108.5 2142.3 1546.4 1569.5 1792.2 1699.5 1936.4 2006.6 True False 1883.1573334589991 1392.2071861983914 1574.9955832941937 1176.9695274138417 1991.8322385337829 1533.806631107286 1629.228181363355 1756.453165046298 1628.0759251704483 1814.1353735319076 1759.8009208854257 1.0700967996490807 0.7911162959830232 0.8949850887120521 0.6688083370371585 1.1318508900038609 0.8715796275044377 0.9258025507474025 0.9980976508198192 0.9251477856661756 1.030875340501097 1.0 10.78119651653818 -6.7676276914613265 24.999996086013248 0.9659640631257025 0.8543657868053952 0.22702351111793506 0.10984791750387062 172.05151663582657 695069.3050456845 0.01423502401277718 0.027384479285697205 1.707545592912735e-07 6.7676276914613265 -0.11159827632030728 LTPLSHEVISR ddPTM_A549_PD325901_60min_R1 1 LTPLSHEVISR 11 0 H7BZU1;Q2VIR3-2;Q2VIR3;P41091 H7BZU1 EIF2S3;EIF2S3L Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 0 83.045 0.00069056 2193100.0 416.91 337.81 478.27 451.12 412.43 419.28 597.42 554.72 586.87 570.46 720.5 False True 459.2343962870797 366.27843424429824 510.7282782711469 478.98465783214453 383.4623396062588 415.8655226918409 620.1551450207678 543.6556744305782 562.2058947953994 534.4410582446872 631.88306762581 0.7267711698820678 0.5796617333338672 0.80826390900158 0.7580273667275902 0.6068564885700315 0.6581368357509291 0.9814397264210485 0.8603738607417812 0.8897309068714084 0.845791073738937 1.0 9.303513796651023 -7.760156661928407 24.999881829962 0.9409311653825162 0.6893618891009409 0.6819684275329697 0.07589529522899952 13.607196006981486 265197.43167551013 0.01176442091400491 0.016922021616959174 1.7371740693896688e-08 7.760156661928407 -0.2515692762815753 LTPPS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 LTPPSPVR 8 0 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 LTPPS(1)PVR;LT(0.011)PPS(0.989)PVR 66.568 0.0084185 41703000.0 3157.4 4050.8999999999996 3282.1 3473.0 4684.9 4504.0 3614.6 3825.7 5559.5 5123.6 5348.3 True False 3690.2919289814167 4257.073507207146 3747.551132567826 4323.885155908896 3995.757416049501 4980.610290486769 4271.326031859756 4368.004690714875 4300.282126697204 3966.1752015052593 4020.1695044292037 0.917944361528949 1.0589288592227104 0.9321873439512882 1.0755479715830576 0.9939275972436469 1.2389055449028714 1.0624741138784923 1.0865225174964503 1.0696768188404464 0.9865691476778637 1.0 11.973040616425482 -3.8409339597475403 0.7657097757400487 1.0514945604519879 8.508274430799187e-11 0.21305086837235 0.0746081263087935 23.84879472013169 1.8063514439246502 0.011439234057592933 35.06344638941352 0.00014423346610194704 3.8409339597475403 -1.051494560366905 LTPPS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 LTPPSPVR 8 0 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 LTPPS(1)PVR;LT(0.022)PPS(0.978)PVR 76.17 0.004703 26858000.0 3310.5 3695.6000000000004 3867.0 3095.0 3879.0 3139.3 3185.7 3215.7 3500.9 3535.2 4225.4 True False 3646.5795229387068 4007.041181709328 4129.437874160046 3286.171120745008 3606.552421823531 3113.7345816315965 3306.9335567819285 3151.5603408321513 3353.769347707694 3311.986868678993 3705.7025870174803 0.9840453833813041 1.0813175336163119 1.1143468147247098 0.886787604665778 0.9732438956268884 0.8402548527613148 0.8923904385547304 0.8504622988022015 0.9050292809404766 0.8937540968026342 1.0 11.855531382580704 -6.263406487416042 24.997478772304518 0.9317195676988732 1.0620446743069383 0.5621866743232432 0.05741815433256884 122.69458560095995 1559178.578309072 0.009202066215365567 0.022410322929365265 5.45247286067571e-07 6.263406487416042 0.13032510660806507 LTPPS(ph)PVRSEPQPAVPQELEMPVLK ddPTM_A549_MK2206_60min_R1 4 LTPPSPVRSEPQPAVPQELEMPVLK 25 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 LT(0.138)PPS(0.677)PVRS(0.185)EPQPAVPQELEMPVLK;LT(0.061)PPS(0.864)PVRS(0.075)EPQPAVPQELEMPVLK;LT(0.138)PPS(0.674)PVRS(0.188)EPQPAVPQELEMPVLK;LT(0.157)PPS(0.807)PVRS(0.036)EPQPAVPQELEMPVLK 61.03 8.514e-05 22448200.0 4451.58 4898.909999999999 4907.639999999999 4640.9 6307.0 4805.9 4657.9 4799.04 7170.000000000001 7168.599999999999 6976.2 True False 5202.897873318266 5148.243594063577 5603.617147629618 5777.920708337917 5379.248654832382 5314.457148101768 5504.180137165815 5479.318616443615 5546.006448137234 5549.208281191077 5243.817006674837 0.992196689300087 0.9817740755465713 1.0686141679804602 1.1018539931853497 1.0258269211120743 1.013471130159007 1.0496514523980456 1.0449103409728082 1.057627762577859 1.058238354642717 1.0 12.35640162541452 -5.740143745254668 24.95447002013877 1.0364332939167307 0.9869853347379485 0.36479601845866805 0.027811348584703424 244.93769642635644 287015.9523427738 0.004427872314618476 0.017116285583348913 1.8190986633473316e-06 5.740143745254668 -0.0494479591787822 LTPPS(ph)PVRSEPQPAVPQELEMPVLK ddPTM_A549_PD325901_60min_R1 3 LTPPSPVRSEPQPAVPQELEMPVLK 25 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 LT(0.037)PPS(0.9)PVRS(0.063)EPQPAVPQELEMPVLK;LT(0.11)PPS(0.881)PVRS(0.008)EPQPAVPQELEMPVLK;LT(0.019)PPS(0.978)PVRS(0.004)EPQPAVPQELEMPVLK 128.43 4.741500000000001e-24 98246000.0 10279.9 11478.0 11143.0 10443.8 12689.8 11686.9 13244.4 12289.0 12645.2 11942.300000000001 13012.6 True False 11323.507880337593 12445.291342044497 11899.230988302399 11088.889806409281 11798.512225433418 11591.725761179347 13748.422889613761 12043.886254466008 12113.766218867524 11188.261139914337 11412.13269366775 0.9922341585303041 1.0905316014201285 1.0426824948245585 0.9716755057152615 1.0338569084444713 1.0157370293820056 1.2047198590007937 1.0553580630155832 1.0614813675965307 0.9803830221955241 1.0 13.478280806501406 -5.142784605452903 17.587178527766277 1.0417871193416286 0.9920855291890073 0.056698221064833465 0.06080497820069924 55011.48711956273 8098488.7414545175 0.008097814718328695 746.7756850594978 7.198058874930833e-06 5.142784605452903 -0.04970159015262132 LTPS(ph)PDIIVLSDNEASSPR ddPTM_A549_MK2206_60min_R1 1 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LT(0.499)PS(0.499)PDIIVLS(0.001)DNEASSPR 62.203 0.0025811999999999996 2059900.0 379.4 529.5 658.37 425.96 505.33 376.32 536.76 515.69 1267.1 999.51 679.62 True False 443.43344456057144 556.4492883226404 751.7367658354955 530.320219122071 430.99662640660296 416.1419326190012 634.2823440660214 588.7906367343898 980.1038731429135 773.719996810157 510.8515974422111 0.8680279102205095 1.0892581937860877 1.4715364884819293 1.0381101317434214 0.8436826439705094 0.8146043483128704 1.2416176189754857 1.1525668896454715 1.918568676402711 1.5145690072892104 1.0 8.996760438414777 -8.543163582497439 24.79484674951085 1.4391264261773031 1.062567344747289 0.32593953472961035 0.2656476719710636 276.41163142175486 337865.74251288886 0.06208719164685351 0.07040408399686007 2.8630993442797995e-09 8.543163582497439 -0.37655908143001415 LTPS(ph)PDIIVLSDNEASSPR ddPTM_A549_PD325901_60min_R1 2 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LT(0.02)PS(0.98)PDIIVLSDNEASSPR;LT(0.003)PS(0.997)PDIIVLSDNEASSPR 139.88 1.1250999999999998e-17 9956600.0 2786.8 2735.29 2615.0 2942.8999999999996 2310.9 2638.9 3195.2 2591.2 3125.5 3024.3 2564.2 True False 3069.713884466272 2965.802487801091 2792.4696252724375 3124.6762491891686 2148.590356172208 2617.4096733245065 3316.7950844805287 2539.5164832429246 2994.1461042190276 2833.3451818697336 2248.8196558030545 1.3650333749729147 1.3188262918940032 1.2417490295704683 1.389473914071311 0.9554302634396645 1.1639037690596084 1.4749048799540574 1.129266402794786 1.3314300666541519 1.2599254789321666 1.0 11.134952253420792 -10.862462876598661 0.9689627836832913 0.9907032525963199 1.2635267081478936 0.001203478219755083 0.15504659319188505 0.5518319578123009 0.8664671797287802 0.10982712601268689 0.023210852432605594 1.3725782836972997e-11 10.862462876598661 0.2728234555515737 LTPSPDIIVLS(ph)DNEASSPR ddPTM_A549_MK2206_60min_R1 1 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(0.373)DNEAS(0.313)S(0.313)PR 41.136 0.021696 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LTPSPDIIVLSDNEAS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(0.045)DNEAS(0.478)S(0.478)PR;LTPSPDIIVLSDNEAS(0.5)S(0.5)PR 126.63 2.9096e-15 10857300.0 1167.4 1046.05 1071.49 940.53 1275.54 977.15 1234.53 968.46 2053.3500000000004 1506.48 1411.15 True False 1364.4285798102567 1099.2894769592024 1223.44339387438 1170.9598922219957 1087.9097556976208 1080.5513644203259 1458.828120984846 1105.7421707843619 1588.2695035261638 1166.1651217042 1060.7225092413046 1.2863200016243472 1.0363591489592159 1.1534057052767397 1.1039266933814196 1.0256308753886652 1.0186937252733554 1.3753155120921225 1.0424424495104363 1.4973468458420798 1.0994064060527144 1.0 10.050831573429619 -7.744109390880763 24.996883756424026 1.2329081918758988 1.0996514182507373 0.08028712334956878 0.15146134780738574 462.3394648691829 666879.9898852714 0.02957792771487723 0.04381293917103105 1.802563650676026e-08 7.744109390880763 -0.13325677362516153 LTPSPDIIVLSDNEAS(ph)SPR ddPTM_A549_PD325901_60min_R1 3 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(0.023)DNEAS(0.708)S(0.269)PR;LTPSPDIIVLS(0.021)DNEAS(0.557)S(0.422)PR;LTPSPDIIVLS(0.003)DNEAS(0.499)S(0.499)PR 130.39 1.6962999999999998e-16 21938000.0 2155.98 1771.97 2133.52 2053.3 2354.6000000000004 2070.94 2409.5 1885.6 2353.1400000000003 2132.62 2306.5 True False 2374.8535024514113 1921.3001306292554 2278.313497097994 2180.127677617359 2189.221018929024 2054.074951257968 2501.194841028991 1847.9902287754148 2254.24570906478 1997.966009244794 2022.8151221081598 1.1740338879691388 0.9498149927942469 1.1263083176496902 1.077769121750113 1.0822645109788567 1.015453626388372 1.2364920618263266 0.9135734692597394 1.114410152676447 0.9877155788525703 1.0 10.98214875354193 -11.019396813745184 1.2103391459024098 0.9985346186820901 1.0772388676808704 0.11419131373138214 0.08823696930668454 0.9151278120263306 2.311315123433185 0.06175294845930665 0.012877199947538118 9.563198849785722e-12 11.019396813745184 0.07870424899878026 LTPVRPAAAS(ph)PIVSGAR ddPTM_A549_MK2206_60min_R1 2 LTPVRPAAASPIVSGAR 17 1 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 LTPVRPAAAS(0.998)PIVS(0.002)GAR;LTPVRPAAAS(0.978)PIVS(0.022)GAR 144.5 7.6232e-17 53421000.0 4727.4 4316.6 4271.299999999999 3783.0 6105.299999999999 4598.200000000001 3888.8 4243.5 7357.9 6680.5 7176.3 True False 5525.269546166702 4536.296502310688 4877.0345670567485 4709.835169825322 5207.218457642007 5084.778471961869 4595.344622557465 4845.029120173713 5691.347398151871 5171.37041019125 5394.226654195782 1.0242931749760626 0.8409540038111354 0.9041211798661172 0.8731251895323825 0.9653317873826611 0.9426334483010247 0.8519005442574564 0.8981879017644006 1.055081249454911 0.9586861549780841 1.0 12.397200426557141 -8.75605653500974 24.999887266836254 1.0260105920950737 0.9093235851298469 0.3405168399256646 0.05473233462134078 73.84845810019559 342978.593243262 0.008464632174695895 0.009463680210834172 1.7536522023772488e-09 8.75605653500974 -0.11668700696522682 LTPVRPAAAS(ph)PIVSGAR ddPTM_A549_PD325901_60min_R1 4 LTPVRPAAASPIVSGAR 17 1 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 LTPVRPAAAS(0.988)PIVS(0.012)GAR;LTPVRPAAAS(1)PIVSGAR;LTPVRPAAAS(0.999)PIVS(0.001)GAR;LTPVRPAAAS(0.999)PIVS(0.001)GAR 139.26 1.6802e-13 72870000.0 9508.4 10030.6 9595.9 9246.5 10595.699999999999 11071.0 10999.3 11699.7 12399.1 12316.2 12401.9 True False 10473.685768285884 10875.91386439376 10247.13547883433 9817.635304674863 9851.494585180608 10980.841446578346 11417.884380547915 11466.340305262913 11878.00894603173 11538.553030104154 10876.544922121486 0.9629607419708958 0.9999419799456313 0.9421314904876623 0.9026428314295896 0.9057558862414058 1.0095891227594467 1.049771270408254 1.0542263547261097 1.0920755654558458 1.06086566209424 1.0 13.408932717814805 -7.473402544401722 4.408075773843455 1.0456143257804822 0.9439044802587482 0.7225689470248611 0.032053403303777546 0.12271499966216998 5.085751308716853 0.0064229309857027905 0.010226217064414045 3.3619980375432285e-08 7.473402544401722 -0.10170984552173401 LTPVS(ph)LS(ph)NSPIKGADCQEVPQDKDGYK ddPTM_A549_PD325901_60min_R1 1 LTPVSLSNSPIKGADCQEVPQDKDGYK 27 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 2 LT(0.123)PVS(0.627)LS(0.627)NS(0.623)PIKGADCQEVPQDKDGYK 48.449 0.0034713 3285100.0 1492.8 1598.9 1688.1 1692.3 1677.8 2053.6 1790.1 1505.6 1311.0 1788.1 2064.6 True False 1644.3479570587224 1733.644914340037 1802.6646173699432 1796.8295275078444 1559.957116095777 2036.8761624689098 1858.2232350803067 1475.5696268796494 1255.9032291253075 1675.1990608409442 1810.6672885777186 0.9081447306370458 0.9574618845087864 0.9955802641058029 0.992357645627572 0.8615371393389037 1.1249312202844723 1.0262643207852633 0.8149313991521386 0.6936134744621255 0.9251832578015009 1.0 10.82230575904705 -8.264324301848127 24.825316295034362 0.8482459173010154 0.9819499919677881 0.2797128820754148 0.09401032156645098 284.3925974214643 2447248.231361451 0.020363949296604858 0.025168294836422526 5.440962067323101e-09 8.264324301848127 0.1337040746667727 LTPVS(ph)PES(ph)SSTEEK ddPTM_A549_PD325901_60min_R1 2 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 2 LT(0.002)PVS(0.992)PES(0.88)S(0.113)S(0.011)T(0.002)EEK;LT(0.001)PVS(0.999)PES(0.925)S(0.068)S(0.006)T(0.002)EEK 125.97 4.5971000000000003e-07 24016000.0 6653.8 6615.9 6304.6 7047.9 7091.299999999999 6818.6 6466.5 7276.0 7551.0 7670.0 9237.8 True False 7329.288877731332 7173.445111503065 6732.468068639624 7483.232776057748 6593.2315516569215 6763.071582299627 6712.586196104573 7130.874472088418 7233.657729309835 7185.714891029607 8101.609163239005 0.9046707549147062 0.8854346052698422 0.8310038083777419 0.9236723995540126 0.8138175291858886 0.8347812695022387 0.8285497437426241 0.88018001466236 0.8928667852964948 0.8869490919945556 1.0 12.983992773061226 -10.063972561095996 0.6473229348892817 0.9989656949740354 0.8604642602650308 0.19321510731305636 0.04582530895593921 0.30642315779804985 0.2506300056195633 0.020706256705516853 0.007541936833172787 8.63033072829025e-11 10.063972561095996 -0.13850143470900467 LTPVS(ph)PESS(ph)STEEK ddPTM_A549_MK2206_60min_R1 1 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 2 LT(0.001)PVS(0.999)PES(0.16)S(0.777)S(0.055)T(0.008)EEK 143.46 6.1845e-13 5215300.0 1385.5 1589.1 1281.5 1227.9 1914.4 1525.0 1207.3 1622.3 2335.8 2160.6 2202.6 True False 1619.3385277772052 1669.978402405113 1463.2359697710833 1528.735555122525 1632.7942959903448 1686.3744877869267 1426.6507824556752 1852.265993085383 1806.7450295061292 1672.5189593981302 1655.6336313325294 0.9780778169345882 1.008664218219002 0.8837921277265939 0.923353769935278 0.9862050788834228 1.0185674269189953 0.8616947345454934 1.1187656242490043 1.091271036848882 1.0101987104792083 1.0 10.693167744494087 -8.270086548739428 24.99976122762093 1.0499793868852976 0.953909542987968 0.44648721707312744 0.055330822583613666 509.5298465674259 1473095.5935140927 0.009679075728957572 0.011790511205651968 5.3692478420245565e-09 8.270086548739428 -0.09606984389732953 LTPVS(ph)PESSSTEEK ddPTM_A549_MK2206_60min_R1 5 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 LTPVS(0.978)PES(0.019)S(0.002)STEEK;LTPVS(0.627)PES(0.274)S(0.082)S(0.017)TEEK;LTPVS(0.999)PES(0.001)SSTEEK;LTPVS(0.995)PES(0.005)SSTEEK;LTPVS(0.988)PES(0.005)S(0.005)S(0.001)T(0.001)EEK 306.15 1.1868999999999998e-135 2121888000.0 29257.1 33483.0 27708.9 28372.8 43017.4 30642.3 29031.2 29619.5 41029.9 44225.3 45726.5 True False 34194.98321258063 35187.14168254385 31638.438675606663 35324.1372737034 36689.59744480519 33884.847847287456 34305.79325406045 33818.154830914435 31736.693161286737 34234.77401419519 34371.34806280162 0.9948688410504369 1.0237346995599839 0.9204887343318184 1.027720449287031 1.0674471474836478 0.9858457627374622 0.9980927483955128 0.9839053961201517 0.9233473503366534 0.9960265146319868 1.0 15.068918815646605 -8.52497607684185 24.851187067372 0.9632673082402324 1.0022082205095293 0.08989041185496793 0.038615879969627134 90.63018644320087 1073862.7343837328 0.0071746589057035985 0.008161327634201623 2.9855470735694087e-09 8.52497607684185 0.03894091226929686 LTPVS(ph)PESSSTEEK ddPTM_A549_PD325901_60min_R1 4 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 LTPVS(0.826)PES(0.017)S(0.156)S(0.001)TEEK;LTPVS(0.992)PES(0.008)SSTEEK;LT(0.001)PVS(0.583)PES(0.174)S(0.199)S(0.036)T(0.007)EEK;LTPVS(0.998)PES(0.001)SSTEEK 324.84 5.3049999999999986e-157 3592992400.0 52489.6 55026.799999999996 58681.7 60741.6 66586.7 64219.3 62792.4 64857.200000000004 62588.4 67423.8 73157.5 True False 57818.30555119877 59664.10155257137 62664.19304372834 64493.47067781741 61909.87990364445 63696.31931264103 65181.999143319736 63563.57226651087 59958.02720502392 63166.64976138231 64159.5912836019 0.9011638695705991 0.9299326937548696 0.9766925223500331 1.0052038890450483 0.9649356965194316 0.992779380889241 1.0159353861092808 0.9907103676135268 0.9345138584189855 0.9845238801813663 1.0 15.969377330958885 -5.618423322835056 3.0601065331930855 0.9772355012375902 0.9048529235796448 0.5932047231843982 0.02194164115178029 0.18486394727489228 3.265166473724892 0.00400636192617006 0.021647431597711347 2.407557549529446e-06 5.618423322835056 -0.07238257765794542 LTPVSLSNS(ph)PIK ddPTM_A549_MK2206_60min_R1 2 LTPVSLSNSPIK 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVSLS(0.112)NS(0.887)PIK;LTPVS(0.003)LS(0.014)NS(0.983)PIK 206.49 2.1805000000000003e-25 51741000.0 7192.3 9108.2 10206.9 8762.6 13579.4 10657.1 10827.4 11065.3 15571.5 12923.5 14380.2 True False 8406.184405147604 9571.768475732333 11654.391900005048 10909.437393368069 11581.8882485224 11784.827248389558 12794.598427864305 12633.840161060021 12044.580112575855 10004.072374239438 10809.199466670314 0.777687971349562 0.8855205702555916 1.078191954542133 1.009273390412198 1.0714843670185417 1.0902590228561837 1.183676780812111 1.168804424417914 1.114289744556457 0.9255146419572098 1.0 13.399972060047466 -5.590845634298257 2.294686516301266 1.0742287150552365 0.7721206769289116 0.6388081997924844 0.07119962555832628 0.15743968999181665 1.4467160698376933 0.009646445807016665 0.07187721993257776 2.565395719158184e-06 5.590845634298257 -0.3021080381263249 LTPVSLSNS(ph)PIK ddPTM_A549_PD325901_60min_R1 2 LTPVSLSNSPIK 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVS(0.001)LS(0.184)NS(0.815)PIK;LTPVS(0.002)LS(0.162)NS(0.836)PIK 211.75 1.6327000000000002e-31 98891000.0 19935.8 20207.3 21432.7 20836.2 24642.0 19728.7 22394.1 21969.1 21410.1 20420.7 23122.0 True False 21959.66774003971 21910.24008852552 22887.251907295056 22123.204751556426 22911.230930284983 19568.036008229647 23246.319730021733 21530.90906607446 20510.30795262831 19131.333516981533 20278.140582434382 1.0829231433113706 1.0804856589023215 1.1286662016299844 1.0909878379440914 1.1298487076340458 0.9649817708227226 1.1463733390899997 1.061779258238562 1.0114491449179044 0.9434461428654729 1.0 14.30763774907575 -8.684358045635816 3.558717934539684 1.0050185512561862 1.0881534927868086 0.45338039003485653 0.04858408829660364 0.15838167104979975 3.9652604123278 0.007278056883260643 0.008146537976422182 2.0684353643629037e-09 8.684358045635816 0.0831349415306224 LTPVSLSNS(ph)PIKGADCQEVPQDK ddPTM_A549_MK2206_60min_R1 2 LTPVSLSNSPIKGADCQEVPQDK 23 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVSLS(0.002)NS(0.998)PIKGADCQEVPQDK;LTPVSLS(0.011)NS(0.989)PIKGADCQEVPQDK 247.61 5.708899999999999e-100 27753000.0 5157.299999999999 6902.5 7143.7 6548.0 10332.400000000001 9615.3 7768.0 8354.1 11150.4 10568.7 9984.900000000001 True False 6027.726156120814 7253.807767038765 8156.784079011849 8152.260293950886 8812.51764724752 10632.784663880428 9179.345049379337 9538.319258358251 8624.852203529905 8181.223329719075 7505.37376077916 0.8031213831907892 0.9664818832800834 1.086792522130845 1.0861897826530855 1.1741610648758232 1.416689561743638 1.2230363659366108 1.2708653242830699 1.1491569212183415 1.0900487557957077 1.0 12.873708203196385 -5.420366690855665 1.4648195927797367 1.1300505065594664 0.7295969555926936 0.5004982772373074 0.10999640181772302 0.7447602952718476 1.791180294010094 0.019515794354479317 0.3951059708670063 3.798685238663119e-06 5.420366690855665 -0.4004535509667728 LTPVSLSNS(ph)PIKGADCQEVPQDKDGYK ddPTM_A549_MK2206_60min_R1 2 LTPVSLSNSPIKGADCQEVPQDKDGYK 27 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LTPVS(0.002)LS(0.148)NS(0.849)PIKGADCQEVPQDKDGYK;LTPVS(0.003)LS(0.146)NS(0.852)PIKGADCQEVPQDKDGYK 144.92 2.7439e-33 283160000.0 2673.3 3484.6 3380.6 3906.9 5458.6 3484.6000000000004 3841.5 4207.7 6186.700000000001 5239.6 6200.799999999999 True False 3124.487684090078 3661.951256070014 3860.0199137012273 4864.090675387408 4655.647170963694 3853.338059109723 4539.45082481858 4804.154360540812 4785.4223281297955 4055.9707209397584 4660.970226626146 0.6703513500775451 0.7856628723244873 0.8281580284831195 1.043579005847521 0.9988579511553104 0.8267244525822622 0.9739283033576622 1.0307198130330713 1.0267009003388838 0.870198804911844 1.0 12.186414581912254 -4.461031833644454 0.5264991445096184 1.0082927412401477 2.873090983894234e-16 0.6004044809123656 0.07480584637084763 2.944338853451479 0.29731609368921896 0.011620489666972786 2.2130479034122383 3.45914021511413e-05 4.461031833644454 -1.0082927412401474 LTPVSLSNS(ph)PIKGADCQEVPQDKDGYK ddPTM_A549_PD325901_60min_R1 2 LTPVSLSNSPIKGADCQEVPQDKDGYK 27 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3 P46100-4 ATRX Transcriptional regulator ATRX 1 LT(0.001)PVS(0.011)LS(0.11)NS(0.878)PIKGADCQEVPQDKDGYK;LTPVSLS(0.02)NS(0.98)PIKGADCQEVPQDKDGYK 147.5 1.9652e-33 560310000.0 6182.4 6135.799999999999 7048.299999999999 6273.2 6750.3 6876.3 7012.0 7419.700000000001 6164.200000000001 5486.3 6524.6 True False 6810.032696757667 6652.885399591971 7526.640022871022 6660.681316529102 6276.182215270784 6820.301692630001 7278.8454971136325 7271.708262857951 5905.140110582929 5139.894081702186 5722.115562847134 1.1901249847126858 1.1626618383571612 1.3153596672776766 1.164024257003116 1.0968289868210848 1.1919195999663532 1.2720549623943493 1.2708076554888366 1.031985468613068 0.8982506601360469 1.0 12.482332919034633 -8.822817511275776 7.265568484485124 1.0144928492801408 1.2063440872561204 0.6901708497986008 0.0677384420074687 0.09281586779638124 9.14782528141591 0.01051847439752725 0.011191295076350355 1.503773712774445e-09 8.822817511275776 0.19185123797597958 LTPVSPESS(ph)STEEK ddPTM_A549_PD325901_60min_R1 1 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 LTPVS(0.057)PES(0.266)S(0.532)S(0.112)T(0.033)EEK 133.48 6.7832e-09 11806000.0 5712.3 5879.2 4857.6 6515.4 6512.2 7089.5 6042.3 5693.6 6632.5 6625.1 7177.3 True False 6292.208490827003 6374.660817054197 5187.265947121759 6917.841460452998 6054.805537870375 7031.765462516233 6272.243032973426 5580.036681457207 6353.759090140043 6206.790055353357 6294.537600653331 0.9996299792019534 1.012729007511616 0.8240900724118887 1.0990229782303584 0.9619142694837388 1.1171218457391348 0.9964581087453365 0.8864887360237608 1.009408393951061 0.9860597313310407 1.0 12.619884685521944 -6.2883682136073995 24.999238794412868 1.0056134186480403 0.9522075069549206 0.11903405606388906 0.07391499660191468 1255.0081901459268 1165077.6255666085 0.00966939626784513 0.022474539846850546 5.147919966284892e-07 6.2883682136073995 -0.0534059116931197 LTPYEVDELRR ddPTM_A549_PD325901_60min_R1 1 LTPYEVDELRR 11 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 76.655 0.0012235999999999998 2629300.0 1042.6 657.56 764.12 724.71 942.17 1012.7 914.76 792.75 1083.5 990.26 1139.7 False True 1148.4439844784465 712.9748889070204 815.9777782268353 769.4736907641729 875.9952295100477 1004.4529069596155 949.5716923758795 776.9379793496554 1037.9642629727462 927.7348146011716 999.524125153553 1.1489907602800637 0.7133143372577314 0.8163662663985022 0.7698400382741755 0.8764122920749632 1.0049311284060356 0.9500237847985915 0.7773078806179865 1.0384584392230531 0.9281765104555604 1.0 9.96509757897509 -8.783414600517588 24.99336730137275 1.0181609503910818 0.8767482334972291 0.12353364533885369 0.11925132818747343 239.203200407081 272054.9150484658 0.01930099155700783 0.020555693837683218 1.6465897191987718e-09 8.783414600517588 -0.1414127168938527 LTQAEISEQPTMATVVPQVPTS(ph)PK ddPTM_A549_MK2206_60min_R1 5 LTQAEISEQPTMATVVPQVPTSPK 24 0 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 LTQAEISEQPT(0.001)MAT(0.003)VVPQVPT(0.229)S(0.766)PK;LTQAEISEQPTMATVVPQVPT(0.088)S(0.912)PK;LTQAEISEQPT(0.001)MAT(0.003)VVPQVPT(0.241)S(0.755)PK;LTQAEISEQPTMAT(0.005)VVPQVPT(0.186)S(0.808)PK;LTQAEISEQPT(0.001)MAT(0.001)VVPQVPT(0.193)S(0.806)PK 82.086 3.2138e-06 20190900.0 3070.17 4159.06 4227.53 3420.84 5003.69 3821.5699999999997 3542.14 3943.42 6078.97 5151.96 4863.120000000001 True False 3588.3396375501593 4370.738389218432 4827.05732289219 4258.945953567343 4267.653829348061 4225.966000847143 4185.700987797187 4502.411861217256 4702.0930011203345 3988.128657808385 3655.473088715993 0.981634811818731 1.1956696939475158 1.3205013976967133 1.165087486682421 1.1674696341006574 1.1560654115857651 1.1450504178837875 1.2316906052777852 1.28631585762049 1.0910020566474035 1.0 11.835842415484603 -10.982772893808253 1.2663015263286124 1.0004292733440712 1.1962402256495588 0.24338542284491826 0.08721622464543938 0.358637925217745 1.0267819331166974 0.06000516381865024 0.013917189487375822 1.0404641148777837e-11 10.982772893808253 0.19581095230548762 LTQAEISEQPTMATVVPQVPTS(ph)PK ddPTM_A549_PD325901_60min_R1 6 LTQAEISEQPTMATVVPQVPTSPK 24 0 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 LTQAEISEQPT(0.016)MAT(0.016)VVPQVPT(0.177)S(0.792)PK;LTQAEIS(0.008)EQPT(0.038)MAT(0.038)VVPQVPT(0.248)S(0.667)PK;LTQAEISEQPT(0.001)MAT(0.002)VVPQVPT(0.213)S(0.784)PK;LTQAEISEQPTMAT(0.006)VVPQVPT(0.225)S(0.769)PK;LTQAEISEQPT(0.001)MAT(0.001)VVPQVPT(0.166)S(0.832)PK;LTQAEISEQPT(0.003)MAT(0.003)VVPQVPT(0.209)S(0.785)PK 91.086 6.2297e-08 29775900.0 7306.070000000001 7191.02 6817.0599999999995 7525.39 8386.390000000001 8137.640000000001 7357.82 8453.02 7247.0599999999995 8471.800000000001 8028.82 True False 8047.7768479555325 7797.032492286889 7279.706685911936 7990.216248899282 7797.358897874878 8071.369757865947 7637.825866453598 8284.4178848341 6942.49127053001 7936.8891021935715 7041.32603888335 1.1429348397609196 1.1073244512795466 1.033854510601016 1.1347601580690918 1.1073708069782016 1.146285474255066 1.0847141325762049 1.1765422931825902 0.9859636142670347 1.1271867057944451 1.0 12.781631430793531 -8.77866509772218 24.999998643825524 0.9933716894697295 1.113855650361631 0.19496450183128844 0.05360063646993979 87.17302052857102 126515.28673158275 0.005827131566137718 0.006210710187178785 1.6646958707606733e-09 8.77866509772218 0.1204839608919015 LTQYHGGS(ph)LPNVSQLR ddPTM_A549_MK2206_60min_R1 2 LTQYHGGSLPNVSQLR 16 0 Q6UUV7;Q6UUV7-3;H0YK33 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LT(0.001)QYHGGS(0.999)LPNVSQLR;LTQY(0.002)HGGS(0.998)LPNVSQLR 77.959 0.00012122 5815700.0 1234.55 1352.35 1230.1 1386.51 1714.6799999999998 1408.89 1296.35 1152.51 2069.01 2210.59 2033.74 True False 1442.911858150379 1421.1788386461237 1404.546676875076 1726.205012242799 1462.4528434228607 1557.9778046545075 1531.8800147738039 1315.8818219138477 1600.3825385300433 1711.2161836785672 1528.7062296314443 0.9438777903706524 0.9296611808723745 0.9187812868491404 1.1291934177954974 0.956660485236227 1.0191479399087162 1.0020761249485617 0.8607813564226094 1.0468869083603325 1.1193885067709342 1.0 10.578095476335324 LTQYHGGS(ph)LPNVSQLR ddPTM_A549_PD325901_60min_R1 2 LTQYHGGSLPNVSQLR 16 0 Q6UUV7;Q6UUV7-3;H0YK33 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR 109.42 1.7062e-07 10398600.0 2249.3 2410.8 2865.2 2697.7 2784.9 2595.9 2410.1000000000004 2807.4 3217.0 3334.2 3163.2 True False 2477.6472801528585 2613.9665767033357 3059.6497018472605 2864.3308020787745 2589.2982313834345 2574.759851067902 2501.817674357326 2751.4042046373056 3081.800677418851 3123.6780429818677 2774.1464531769066 0.8931205767148659 0.9422597619926895 1.1029157088456525 1.0325088636897992 0.9333675330724566 0.9281268651549849 0.9018333085811983 0.991802073566247 1.1109004983819886 1.125996084094509 1.0 11.43782823731812 -8.541051992931509 19.949262748684593 1.052316268657699 0.9655432931532235 0.3596454385666772 0.06552916825681061 24.97166153290734 27411.108108573782 0.012058918880384253 0.013678035486457034 2.877053958542665e-09 8.541051992931509 -0.08677297550447549 LTRIPS(ph)AK ddPTM_A549_PD325901_60min_R1 3 LTRIPSAK 8 1 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 LTRIPS(1)AK;LT(0.001)RIPS(0.999)AK;LT(0.006)RIPS(0.994)AK 62.408 0.0028934 12274200.0 4256.38 4558.0 5533.66 5845.0 5895.5 9179.300000000001 7479.0 7513.400000000001 6910.49 6777.5 6897.200000000001 True False 4688.484564218654 4942.118656302389 5909.207444200798 6206.032375041866 5481.420418370876 9104.546824187213 7763.6174376658355 7363.539342851727 6620.066137176311 6349.567493344612 6048.888124953136 0.7750985747078895 0.8170292712002636 0.9769080403097354 1.0259790306652343 0.9061864437132972 1.505160392474237 1.2834784306290976 1.217337664499916 1.0944269426751219 1.0497082045791357 1.0 12.56245426274593 -5.952956831603452 1.2248625923926513 1.1025481672573465 0.7541606231194964 0.4235201247450834 0.15351276006983894 0.5640387538691933 1.3449275863470105 0.025286250931505803 0.18033981830150567 1.1144052987546304e-06 5.952956831603452 -0.3483875441378501 LTRPAAS(ph)PAVGEK ddPTM_A549_MK2206_60min_R1 5 LTRPAASPAVGEK 13 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 LT(0.044)RPAAS(0.956)PAVGEK;LT(0.358)RPAAS(0.642)PAVGEK;LT(0.001)RPAAS(0.999)PAVGEK;LTRPAAS(1)PAVGEK;LT(0.012)RPAAS(0.988)PAVGEK 92.39 4.9872e-05 349053900.0 16333.800000000003 15107.9 14484.8 14898.5 19419.0 15256.8 14595.999999999998 15870.3 21487.1 20515.800000000003 21787.799999999996 True False 19090.546116930585 15876.827578941682 16538.962446305253 18548.633168819088 16562.49082419374 16871.264449355807 17247.904266315752 18119.963625755372 16620.30615784791 15881.26653115809 16377.287947310851 1.1656720073768534 0.9694418044074663 1.0098718725294775 1.1325827101833896 1.011308519302996 1.030162289607057 1.053159981176728 1.1064080746489329 1.0148387334532372 0.969712847588162 1.0 13.99940884831635 -8.970340864169788 23.13655814942732 1.0065464163451823 1.0551123982856885 0.2027063580973697 0.055748742877248236 110.1288519335569 85910.77717047904 0.008924913987436379 0.009380376098256924 1.0706786331651553e-09 8.970340864169788 0.04856598194050621 LTRPAAS(ph)PAVGEK ddPTM_A549_PD325901_60min_R1 3 LTRPAASPAVGEK 13 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 LT(0.001)RPAAS(0.999)PAVGEK;LT(0.008)RPAAS(0.992)PAVGEK;LT(0.022)RPAAS(0.978)PAVGEK 98.391 4.4733e-05 551648700.0 20657.3 18712.899999999998 19467.1 19368.100000000002 21198.7 21474.6 20724.9 22565.6 22485.7 20028.600000000002 22206.0 True False 22754.413888899475 20289.90175592825 20788.254471182063 20564.423548853436 19709.77644354485 21299.71797748095 21513.597410600443 22115.511405629248 21540.704225128076 18763.990777897754 19474.802775431956 1.1684027895576352 1.0418540300456633 1.067443645560666 1.0559502854014045 1.0120655223481556 1.0937064792435884 1.1046888463353524 1.135596168066391 1.106080737942174 0.9635009398692904 1.0 14.249321097497651 -10.798793545187234 1.0819609645050854 1.0006997466899747 1.0853429562434602 0.4538760326780188 0.04321090333615518 0.44655700735688936 0.9401152259753189 0.027965048696980837 0.007234817118303261 1.5893020911155692e-11 10.798793545187234 0.08464320955348548 LTRT(ph)SGETTQTHTEPTGDSK ddPTM_A549_MK2206_60min_R1 2 LTRTSGETTQTHTEPTGDSK 20 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LT(0.053)RT(0.39)S(0.39)GET(0.083)T(0.083)QT(0.001)HTEPTGDSK;LT(0.071)RT(0.428)S(0.428)GET(0.033)T(0.033)QT(0.007)HTEPTGDSK 144.27 2.6189e-21 18752900.0 2886.1000000000004 3703.8999999999996 3545.3 3649.1 4036.6000000000004 3576.8999999999996 3408.0 3920.8999999999996 5431.299999999999 5272.5 6783.8 True False 3373.2031216295904 3892.4126893639823 4048.076850276565 4543.129663814324 3442.8214872516846 3955.405183845942 4027.1894861334677 4476.699582252649 4201.119222003868 4081.438588089718 5099.195236644699 0.6615167619761855 0.7633386267291097 0.7938658283145525 0.8909503270566533 0.6751695762716239 0.7756920455645511 0.7897696203496186 0.8779227651613402 0.8238788724567898 0.8004083779257938 1.0 12.316053861213938 -14.999999994100339 0.13363583819947505 1.772598869527614 0.6946279684730663 0.14897265164153295 0.08413728191863913 29.409599341374847 0.2671334391791356 5.996703072259938 0.15883285516118023 1.000000013584472e-15 14.999999994100339 -1.0779709010545477 LTRTSGET(ph)TQTHTEPTGDSK ddPTM_A549_MK2206_60min_R1 1 LTRTSGETTQTHTEPTGDSK 20 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LT(0.117)RT(0.15)S(0.15)GET(0.194)T(0.194)QT(0.194)HTEPTGDSK 87.65899999999999 2.8062e-06 24480000.0 1603.6 1648.8 1265.8 1371.0 1569.4 1262.4 1259.9 1387.7 1941.3 2518.9 2640.4 True False 1874.2484757441566 1732.716877405797 1445.3094736919525 1706.8950615465292 1338.5433389716081 1395.9863300867003 1488.8075215902454 1584.4107246530145 1501.5986496190803 1949.8787405479743 1984.7158086672155 0.9443409819982034 0.8730302191573504 0.7282198627029189 0.8600198850095069 0.6744256951681522 0.703368373441908 0.7501363747336781 0.7983060938669021 0.7565811906478641 0.9824473267320649 1.0 10.954716727406083 -10.7119434120863 0.8650046305578881 1.006362701667932 0.7827237948171262 0.5124014411952149 0.07620860404017937 0.4201071184211477 0.5331952930993327 0.0617005778026482 0.014349210282341145 1.941138788561751e-11 10.7119434120863 -0.22363890685080579 LTRYS(ph)QGDDDGSSSSGGSSVAGSQSTLFK ddPTM_A549_MK2206_60min_R1 1 LTRYSQGDDDGSSSSGGSSVAGSQSTLFK 29 1 B0QY68;B0QY66;B0QY69;B0QY65;B0QY67;B0QY63;B0QY64;Q9UH99-3;Q9UH99;Q9UH99-2 B0QY68 SUN2 SUN domain-containing protein 2 1 LT(0.189)RYS(0.797)QGDDDGS(0.004)S(0.004)S(0.004)S(0.004)GGSSVAGSQSTLFK 166.88 1.7884e-47 22316000.0 1176.9 1721.9 1336.4 1099.6 1732.4 1888.3 1688.0 1652.2 3018.7 3005.2 2427.2 True False 1375.5319475575554 1809.5373551704513 1525.921615296196 1369.0020493629195 1477.5662548964033 2088.118652647906 1994.68775017409 1886.4044096502919 2334.9692698733425 2326.323232797954 1824.4592526878757 0.7539395278524635 0.99182119441942 0.8363692491614375 0.7503604409613664 0.8098653081561488 1.1445137234890805 1.0933035348613163 1.0339526119156432 1.2798144252514054 1.2750754665365696 1.0 10.833253214920417 -7.261897231514526 24.999994164883795 1.1245671992478086 0.8336454394309449 0.701088808113965 0.10033562983625204 22.027927177525815 1202792.8378309037 0.01728247455953994 0.028672045395458347 5.471454203386085e-08 7.261897231514526 -0.29092175981686363 LTRYS(ph)QGDDDGSSSSGGSSVAGSQSTLFK ddPTM_A549_PD325901_60min_R1 2 LTRYSQGDDDGSSSSGGSSVAGSQSTLFK 29 1 B0QY68;B0QY66;B0QY69;B0QY65;B0QY67;B0QY63;B0QY64;Q9UH99-3;Q9UH99;Q9UH99-2 B0QY68 SUN2 SUN domain-containing protein 2 1 LT(0.053)RYS(0.939)QGDDDGS(0.007)SSSGGSSVAGSQSTLFK;LT(0.03)RYS(0.931)QGDDDGS(0.009)S(0.009)S(0.009)S(0.012)GGSSVAGSQSTLFK 236.05 1.2200999999999995e-120 71430000.0 2885.5 3194.8 3062.7 3086.0 3897.7 3584.3 3601.6000000000004 3664.3 4019.9 4616.0 4406.0 True False 3178.4338358071705 3464.037008151574 3270.5532395112396 3276.6152111854885 3623.938998335025 3555.1106491708783 3738.660858871144 3591.2126619122605 3850.9575825788124 4324.54497222851 3864.089931935207 0.8225569000189787 0.8964690442431604 0.846396770551685 0.8479655672880522 0.9378505837518357 0.920038278557977 0.9675398152544431 0.929381232106499 0.9966014379614043 1.119162609671121 1.0 11.915912956177158 -7.367951536284703 0.5252908635856359 1.0020159826551718 0.8382744115162645 0.7090587890202436 0.043884007660008 0.2583421047910688 0.1351905963694702 0.006032053078632201 0.017759594633498074 4.2859634557878673e-08 7.367951536284703 -0.1637415711389073 LTRYS(ph)QGDDDGSSSSGGSSVAGSQSTLFKDS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 LTRYSQGDDDGSSSSGGSSVAGSQSTLFKDSPLR 34 2 B0QY68;B0QY66;B0QY69;B0QY65;B0QY67;B0QY63;B0QY64;Q9UH99-3;Q9UH99;Q9UH99-2 B0QY68 SUN2 SUN domain-containing protein 2 2 LT(0.182)RYS(0.817)QGDDDGSSSSGGSSVAGS(0.016)QS(0.011)T(0.011)LFKDS(0.961)PLR 99.83200000000001 8.2524e-11 9674200.0 1973.6 1732.8 1509.9 1928.0 2201.6 1808.2 1968.1 2595.7 2652.2 2274.8 2291.2 True False 2173.9584191124704 1878.8291372621288 1612.3708937662914 2047.088181194304 2046.9672111076788 1793.4746187068 2042.997122485645 2543.9267272127436 2540.7372572739428 2131.1687397802048 2009.3969251134708 1.0818959618890165 0.9350214055672605 0.802415328507204 1.018757496644773 1.0186972944591752 0.8925437260761819 1.0167215331885096 1.2660150393477325 1.2644277621408557 1.0606011749818207 1.0 10.97254685885317 -8.014279158932483 21.05637093397148 1.139059133387578 0.955506194569074 0.4411780323336839 0.09959788098060782 73.17295910134916 107903.60497994549 0.019504830971488953 0.025734548243521713 9.676556596440108e-09 8.014279158932483 -0.18355293881850387 LTRYSQGDDDGS(ph)SSSGGSSVAGSQSTLFK ddPTM_A549_MK2206_60min_R1 1 LTRYSQGDDDGSSSSGGSSVAGSQSTLFK 29 1 B0QY68;B0QY66;B0QY69;B0QY65;B0QY67;B0QY63;B0QY64;Q9UH99-3;Q9UH99;Q9UH99-2 B0QY68 SUN2 SUN domain-containing protein 2 1 LT(0.015)RYS(0.405)QGDDDGS(0.434)S(0.143)S(0.003)SGGSSVAGSQSTLFK 227.77 8.196599999999999e-105 22147000.0 1388.6 1295.3 1306.7 1114.0 2230.1 1894.3 1939.5 1386.9 2839.2 3087.6 2648.7 True False 1622.9617319894828 1361.2252373263757 1492.0097087006438 1386.9300500093602 1902.055244195606 2094.753568665428 2291.8820447053604 1583.497322203116 2196.1257332707423 2390.1090155686684 1990.9546895988703 0.8151675879256051 0.6837047796404799 0.7493941054988288 0.6966155770670971 0.9553483332053251 1.0521352291987471 1.1511472645151557 0.7953457356290478 1.1030515886392216 1.2004838824585295 1.0 10.95924467305609 -6.882174699556009 3.9119050395234836 1.0365420088931627 0.7333754972430139 0.6700471937891659 0.10267729105450558 0.09161888288187472 2.6219314414541977 0.01294618318945741 0.02541735225818171 1.311672158860791e-07 6.882174699556009 -0.30316651165014885 LTS(ph)DEEGEPSGK ddPTM_A549_MK2206_60min_R1 2 LTSDEEGEPSGK 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LTS(1)DEEGEPSGK;LT(0.006)S(0.994)DEEGEPSGK 279.75 2.5025999999999994e-92 63999000.0 23101.0 24239.0 22611.4 20697.3 29704.0 24665.0 23593.0 26149.0 31837.0 32311.0 30778.0 True False 26999.884034775347 25472.661566860195 25818.03652507362 25768.139429137107 25334.580948650855 27275.03392869809 27879.542707261426 29855.700827953944 24625.97033324198 25011.92265903591 23134.97317041341 1.167059232612582 1.1010456497713332 1.115974344767838 1.1138175626713573 1.0950771700505126 1.1789524771776814 1.2050821283387394 1.2905007759479687 1.0644477584584089 1.0811303940055081 1.0 14.497787805362796 -8.972786883707657 14.623536981886406 1.0284185835455022 1.1552351687436873 0.43043132320630406 0.05631271737201575 1.1958046798594562 642.3206478499043 0.010518608148764163 0.01096667262100568 1.0646653409274712e-09 8.972786883707657 0.12681658519818506 LTS(ph)DEEGEPSGK ddPTM_A549_PD325901_60min_R1 2 LTSDEEGEPSGK 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LT(0.014)S(0.986)DEEGEPSGK;LT(0.004)S(0.996)DEEGEPSGK 264.84 1.1759999999999998e-76 88934000.0 22999.0 24843.0 23148.9 24328.1 27682.0 23721.0 23092.1 24429.9 23911.1 26248.0 27687.0 True False 25333.841549031047 26936.606796516084 24719.923559644038 25830.791483876113 25737.71181771564 23527.824040672484 23970.88250198198 23942.626479614206 22906.199620090098 24590.69680048831 24281.674522353627 1.0433317325668292 1.1093389284877504 1.018048550847964 1.0637977813307882 1.0599644515464364 0.968953933511169 0.9872005524130747 0.9860368755693807 0.9433533753614368 1.0127265637240215 1.0 14.567580296274551 -7.259211858597706 24.63513055180812 0.9745869213792159 1.0597016482048613 0.6593975153173178 0.02676766862442891 70.66839727589218 781552.7152760389 0.004050800392966689 0.006801563465672378 5.505390655734716e-08 7.259211858597706 0.08511472682564547 LTS(ph)DEEGEPSGKR ddPTM_A549_MK2206_60min_R1 1 LTSDEEGEPSGKR 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LT(0.039)S(0.961)DEEGEPSGKR 124.25 1.9068000000000001e-06 44822000.0 2766.2 3548.9 4031.7 3297.2 4499.3 3698.2 3238.1 3072.3 5550.4 5578.0 4454.5 True False 3233.0669329031434 3729.5238514225066 4603.455684218549 4105.014148016934 3837.4589301866677 4089.5410693335184 3826.4208553546923 3507.8079335241455 4293.243262167489 4317.925925910752 3348.324712054279 0.9655774785712398 1.1138477215175324 1.374853420770597 1.225990458224826 1.14608326855859 1.221369317799672 1.1427866722660507 1.0476307512517264 1.2822063662796548 1.2895780120625155 1.0 11.709223728247666 -11.036322971604331 1.3154011373854713 0.9994524488955576 1.18421401875391 0.0 0.13569666358610905 0.47863343083957105 1.4687016585174015 0.07882759074321408 0.017450867250997374 9.197653158485516e-12 11.036322971604331 0.18476156985835246 LTS(ph)TSTSDTQNINNSAQR ddPTM_A549_MK2206_60min_R1 2 LTSTSTSDTQNINNSAQR 18 0 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 LT(0.003)S(0.976)T(0.021)STSDTQNINNSAQR;LTS(0.999)T(0.001)STSDTQNINNSAQR 263.99 3.1529999999999997e-100 11302300.0 3143.5 2937.5 3210.6 1885.3899999999999 3353.2 2867.2 2825.8999999999996 2580.8 3856.6000000000004 3656.0 3846.8999999999996 True False 3674.045948803789 3087.0062029230526 3665.9113574303833 2347.3106346383724 2859.9487219571806 3170.6052009066752 3339.329450957914 2946.636303368524 2983.086257724694 2830.1070607977263 2891.6085609611855 1.2705889719673944 1.067574029417355 1.2677758002666224 0.8117663871689861 0.9890511324971728 1.0964849266640537 1.1548345429742066 1.0190301492222194 1.0316355740533223 0.9787310423015846 1.0 11.497656551549273 -6.227556743220525 24.998184135772274 1.0186132205968277 1.1885390437114003 0.4467011493904719 0.094402341822599 475.0487357780908 350484.6449345597 0.01241836007005428 0.03285398873823365 5.921657117627481e-07 6.227556743220525 0.1699258231145726 LTSCTPGLEDEKEAS(ph)ENETDMEDPR ddPTM_A549_PD325901_60min_R1 2 LTSCTPGLEDEKEASENETDMEDPR 25 1 Q8WXH0;Q8WXH0-2;A0A0C4DGK3;Q8WXH0-7;Q8WXH0-10;Q8WXH0-4;Q8WXH0-3;Q8WXH0-13 Q8WXH0 SYNE2 Nesprin-2 1 LTSCTPGLEDEKEAS(0.924)ENET(0.076)DMEDPR;LTS(0.001)CT(0.001)PGLEDEKEAS(0.551)ENET(0.447)DMEDPR 73.936 1.6167e-06 16108800.0 3572.3999999999996 4157.5 4635.0 3476.1 4414.3 3601.4 3936.4 4156.9 3946.4 4582.1 4835.200000000001 True False 3935.067418138119 4507.867115747516 4949.558972519213 3690.810802204112 4104.2547965082795 3572.0713924403667 4086.201856080732 4073.987368475033 3780.5465319756754 4292.785424013925 4240.501052858174 0.9279722771170668 1.063050582833633 1.1672108816440738 0.8703713915402612 0.9678702458385048 0.8423701227553584 0.9636129799629594 0.9607325449734512 0.891532978025679 1.012329762569098 1.0 12.050019026753741 -6.275714335631129 24.99555559797952 0.9392330610133873 1.053775192331952 0.3362770011085623 0.07140930501738084 642.4138745243482 1124871.064970387 0.009851431293818933 0.022982895145319815 5.300119533768902e-07 6.275714335631129 0.11454213131856472 LTSDDVKEQIYK ddPTM_A549_PD325901_60min_R1 2 LTSDDVKEQIYK 12 1 P62277;J3KMX5;E9PS50 P62277 RPS13 40S ribosomal protein S13 0 ; 124.3 6.4874e-06 14031300.0 9869.4 9848.3 10711.599999999999 10848.9 11702.6 13476.6 11938.6 12097.0 13199.9 12417.8 13050.3 False True 10871.334222531725 10678.250803611852 11438.553590083451 11519.011913360422 10880.649747778307 13366.851037752484 12392.929956052592 11855.715845087088 12645.154106888738 11633.737988764991 11445.195832667732 0.94986004446529 0.932989785385165 0.9994196479744522 1.0064495253529868 0.9506739689610154 1.1679005963008355 1.0828062828492429 1.0358683257518075 1.1048438394383777 1.0164734757581961 1.0 13.482454527842917 -7.173154713776774 24.999952927560155 1.059705367841234 0.9698351624860294 0.5221268028120428 0.04730849123372306 57.53572249092045 16291.140660771858 0.00795373417104897 0.01377627051883231 6.711897046126968e-08 7.173154713776774 -0.08987020535520462 LTSPVTSIS(ph)PIQASEK ddPTM_A549_MK2206_60min_R1 2 LTSPVTSISPIQASEK 16 0 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7 E9PMC9 C11orf30;EMSY Protein EMSY 1 LTSPVTS(0.018)IS(0.982)PIQASEK;LTSPVTS(0.003)IS(0.997)PIQASEK 150.76 8.4313e-15 4574600.0 2900.2 3695.9 2924.9 3395.7 4019.9 3372.2 2818.8 3238.4 5205.8 4999.3 5277.0 True False 3389.6828569176832 3884.0055235347454 3339.6948013916817 4227.646652438766 3428.578035129331 3729.043965714803 3330.939472861805 3697.4531171840626 4026.694611954368 3869.9546578353593 3966.575262209096 0.8545615884847411 0.9791836198190866 0.8419592672828078 1.065817833514212 0.8643673215518066 0.9401167806502164 0.8397519907404233 0.9321525176670538 1.0151564878443249 0.9756413031427201 1.0 11.953678207753862 -8.701121223620538 5.238616455259525 1.0071880579494565 0.915396159406996 0.24121222065793746 0.06462191023999916 0.16739473117142945 9.187027319066177 0.00984173932752037 0.011078594006297907 1.990117764455229e-09 8.701121223620538 -0.0917918985424605 LTSPVTSIS(ph)PIQASEK ddPTM_A549_PD325901_60min_R1 2 LTSPVTSISPIQASEK 16 0 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7 E9PMC9 C11orf30;EMSY Protein EMSY 1 LTSPVT(0.005)S(0.055)IS(0.94)PIQASEK;LTSPVTS(0.002)IS(0.998)PIQASEK 230.93 2.9505999999999996e-55 7491400.0 5020.0 4640.2 4872.4 4564.6 6424.4 5997.7 4488.5 5110.799999999999 6025.9 6317.1 6059.700000000001 True False 5529.6267044713195 5031.245938783317 5203.070364121389 4846.544975041247 5973.172306976821 5948.856719731094 4659.3123237014415 5008.861084654962 5772.6523786317175 5918.237227916969 5314.395315603221 1.040499694901539 0.9467203021219424 0.9790521884672412 0.9119654612090389 1.1239608557984784 1.1193854364324527 0.8767342372934815 0.9425081852584053 1.0862293893875452 1.1136238229288005 1.0 12.375689832522117 -6.739939277310399 24.998981292849525 1.0322793118022986 0.9686061371733772 0.14562455604010283 0.07849759257731802 403.2730999131567 468898.2343782678 0.011200333103743307 0.023298847256005204 1.819955305443126e-07 6.739939277310399 -0.06367317462892141 LTSS(ph)CPDLPSQTDKK ddPTM_A549_PD325901_60min_R1 2 LTSSCPDLPSQTDKK 15 1 P56962 P56962 STX17 Syntaxin-17 1 LTS(0.015)S(0.985)CPDLPSQTDKK;LT(0.006)S(0.039)S(0.955)CPDLPSQTDKK 138.55 1.6008e-30 7320100.0 3248.6 3205.2 3417.8 3067.2 3938.8 3810.2 3589.4 3997.1 3280.8 3889.4 4097.1 True False 3578.395480507079 3475.3134526503773 3649.7524609010106 3256.653977883387 3662.152276122331 3779.1709944677846 3725.9965811950437 3917.3747048357086 3142.9193852893254 3643.822620230842 3593.182673656774 0.9958846531076455 0.9671964295412675 1.0157436435556073 0.90634244725696 1.0191945717013509 1.051761443183664 1.0369627485159572 1.090224199720134 0.8746895637484479 1.0140933404096963 1.0 11.8110465669767 -8.769764243367323 24.999135892870477 0.9408256360453825 1.0082377252776926 0.0887449008029082 0.05647285212345869 222.6900581514834 668724.421253504 0.010895626565947355 0.011692293158732232 1.6991657938019894e-09 8.769764243367323 0.06741208923231012 LTSVSS(ph)SVDFDQR ddPTM_A549_PD325901_60min_R1 1 LTSVSSSVDFDQR 13 0 E9PNG1;H3BLW6;Q5T3F8-2;Q5T3F8-3;Q5T3F8 E9PNG1 TMEM63B CSC1-like protein 2 1 LT(0.001)S(0.01)VS(0.147)S(0.657)S(0.185)VDFDQR 56.956 0.014582 3160100.0 1932.9 1946.9 1639.8 2290.1 2243.9 2119.9 1736.2 1861.8 1775.1 2182.1 2231.6 True False 2129.126585074228 2110.9720956461447 1751.0866889184476 2431.554275805538 2086.296205034756 2102.6362372506064 1802.2720410850945 1824.6649384461557 1700.4987200765313 2044.3218336004834 1957.1273472779421 1.0878835186864615 1.0786074286796803 0.894722916908772 1.2424098407226538 1.0659992094722235 1.074348197205994 0.9208762238143434 0.9323179408759369 0.8688748447778112 1.0445522803837037 1.0 10.934521917636989 -7.75817651792059 24.923767855048908 0.9348101698119315 1.073347869212738 0.31764427587589006 0.0861413517347273 64.86910255675065 495507.1856784468 0.012896908771852428 0.018688311078337388 1.7451127119991203e-08 7.75817651792059 0.1385376994008065 LTTASQTNIKKS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 LTTASQTNIKKSPGK 15 2 H7C2B1;Q9UMY1-2;Q9UMY1 H7C2B1 NOL7 Nucleolar protein 7 1 LTTASQT(0.001)NIKKS(0.999)PGK 89.01100000000001 7.3116e-06 24216000.0 4152.9 5480.1 5743.8 4705.5 5762.5 4433.9 4308.4 3093.8 7244.7 8351.9 8126.8 True False 4853.80799134317 5759.013682600384 6558.35720887331 5858.347711237919 4914.843883537589 4903.092355015381 5091.180511167089 3532.355624365133 5603.78701740862 6465.199989353538 6108.69127173032 0.7945741199601175 0.9427573642904221 1.0736108467658112 0.9590184624895128 0.8045657678400618 0.8026420286953794 0.8334322827424514 0.5782508015607365 0.9173465752544598 1.058360899538836 1.0 12.576647614293119 -4.3372189472012845 16.55278986948777 0.9098981019411562 0.8904722577772253 0.0 0.1389063706406547 0.0 0.0 0.018592801805587904 0.0 4.6002459621271596e-05 4.3372189472012845 -0.019425844163930894 LTTASQTNIKKS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 LTTASQTNIKKSPGK 15 2 H7C2B1;Q9UMY1-2;Q9UMY1 H7C2B1 NOL7 Nucleolar protein 7 1 LT(0.002)T(0.002)AS(0.002)QT(0.009)NIKKS(0.985)PGK;LTTAS(0.001)QT(0.028)NIKKS(0.97)PGK 68.676 0.00051918 93384000.0 11554.5 12085.2 12777.5 13820.800000000001 15153.7 17810.9 15801.4 17544.5 16148.9 13864.7 16043.0 True False 12727.504334026666 13103.662217013085 13644.65798734936 14674.479426685813 14089.35638942697 17665.853935585077 16402.73092385785 17194.561184106005 15470.21789231249 12989.280475835489 14069.812704956094 0.9045965714627744 0.9313316738322549 0.9697824891828891 1.042976174197168 1.0013890507912726 1.2555855792850943 1.1658101829656897 1.2220888468578703 1.099532610470579 0.923202088629084 1.0 13.780315503331463 -6.235269615103946 1.4608373103929242 1.0840037370953925 0.9128667201740054 0.3720776493265855 0.09262405056253924 0.40359852098318255 1.5812216878914966 0.014074057778855602 0.05807077763309773 5.817419534216732e-07 6.235269615103946 -0.17113701692138716 LTTGTPAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 LTTGTPASPR 10 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 LTTGTPAS(1)PR;LTTGTPAS(1)PR 138.22 3.2429e-07 28400000.0 6249.7 7167.7 5742.5 6340.2 6575.7 7738.400000000001 6686.7 7745.1 7709.200000000001 7736.8 7478.5 True False 6884.164943214026 7771.747234045339 6132.220582457734 6731.819754361061 6113.8455169334875 7675.381036058343 6941.166027602637 7590.617904586593 7385.209133465154 7248.297127629454 6558.691910117444 1.0496246869889567 1.1849538506385144 0.934976160871067 1.0263967032780652 0.9321745251522279 1.1702609516111426 1.0583156096866186 1.1573371654913838 1.1260186077764567 1.1051437126430994 1.0 12.679192391736137 -7.263627656788356 24.993270934054436 1.075869349150153 1.0294835875247648 0.14816033128011297 0.07860714524487523 485.26146781162856 5542342.008002428 0.012704535787670718 0.020926710678563467 5.449696834181434e-08 7.263627656788356 -0.04638576162538821 LTTTGQVT(ph)SPVK ddPTM_A549_MK2206_60min_R1 2 LTTTGQVTSPVK 12 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTTGQVT(0.5)S(0.5)PVK;LTTTGQVT(0.5)S(0.5)PVK 223.03 4.899899999999999e-40 388230000.0 11939.6 12949.1 11544.3 11248.2 16418.6 12156.5 12430.0 13247.3 17919.7 17436.7 17225.9 True False 13954.712584806008 13608.153879922014 13181.45533033812 14004.009504950885 14003.445689587898 13442.892761168385 14688.370103473899 15125.145343154776 13860.916561880726 13497.737359685922 12948.233619345776 1.0777309859436321 1.0509660452519378 1.018011855350207 1.0815382172304715 1.0814946734252264 1.0382028279968278 1.1343918047268013 1.1681242235664104 1.0704870617387783 1.0424385098766784 1.0 13.660467680362945 -10.25007452613992 1.0354033835087628 1.0063834073479447 1.0788333059814386 0.2136337455709052 0.041275627583857666 0.42885820598477503 0.9092135514018674 0.01784309416918811 0.007963063504953261 5.622448341356046e-11 10.25007452613992 0.07244989863349383 LTTTGQVT(ph)SPVKGASFVTSTNPR ddPTM_A549_PD325901_60min_R1 1 LTTTGQVTSPVKGASFVTSTNPR 23 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTTGQVT(0.5)S(0.5)PVKGASFVTSTNPR 185.68 4.2754e-50 252180000.0 3659.7 3497.0 3756.1 4035.3 5075.4 5062.9 4104.7 5254.1 5002.6 4151.6 4661.9 True False 4031.2300498712516 3791.7044627225664 4011.0115332641717 4284.551316168765 4718.921413179464 5021.669420999147 4260.906604678027 5149.302853738288 4792.358119010114 3889.46726748351 4088.5158542189624 0.985988606528553 0.9274036344532908 0.9810434094624303 1.0479478297112417 1.1541893394665408 1.228237727344816 1.0421646280963235 1.2594552735865494 1.1721510420620853 0.9513151975355426 1.0 11.99736151943367 -6.379744308987202 2.840954747146834 1.1090570595160352 0.9583741217790305 0.3537687172624775 0.08871606449329533 0.24499824574951068 3.788702571540983 0.01321316815722265 0.03458121753456035 4.1711488771421035e-07 6.379744308987202 -0.1506829377370047 LTTTGQVTS(ph)PVK ddPTM_A549_PD325901_60min_R1 4 LTTTGQVTSPVK 12 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTTGQVT(0.037)S(0.963)PVK;LTTTGQVT(0.049)S(0.951)PVK;LTTTGQVT(0.013)S(0.987)PVK;LTTTGQVT(0.073)S(0.927)PVK 267.41 8.781099999999999e-77 660242000.0 44772.5 42369.6 42335.9 40489.2 48949.9 40134.6 42053.5 42864.1 43115.4 43453.7 49181.8 True False 49317.771240227565 45940.23488812413 45209.06876044794 42990.12592635498 45511.827891987516 39807.75712418424 43653.86895505817 42009.14189926405 41303.40967584228 40710.02596614514 43132.75038911737 1.143395002528536 1.0650893920206652 1.0481378616619457 0.9966933603473992 1.0551571017708716 0.9229125609904987 1.0120817374556361 0.9739499920659636 0.9575881274258681 0.943830977595542 1.0 15.39649609298396 -4.579234888867026 0.5564778368549854 0.978942370537887 1.4116454076816645 0.7243837065336962 0.03189717875795722 2.578333227041031 0.31246118208270685 0.005222664796771016 0.8576517103566456 2.6349059072883336e-05 4.579234888867026 0.43270303714377745 LTTTGQVTS(ph)PVKGASFVTSTNPR ddPTM_A549_MK2206_60min_R1 2 LTTTGQVTSPVKGASFVTSTNPR 23 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTT(0.001)GQVT(0.067)S(0.932)PVKGASFVTSTNPR;LTTTGQVT(0.04)S(0.96)PVKGASFVTSTNPR 156.08 2.2855e-33 231130000.0 4956.6 6169.3 5962.5 5912.4 7977.5 5937.3 5439.299999999999 5538.1 9017.8 7836.0 8614.2 True False 5793.152902764705 6483.291018789174 6808.0721574405625 7360.938265417721 6804.020317730345 6565.581145139227 6427.55040256038 6323.142634719938 6975.282698467495 6065.842157661648 6475.056400174646 0.8946876358649866 1.0012717446931128 1.0514305569997713 1.1368145403674292 1.050804795699822 1.013980533816221 0.992663230298197 0.9765386189608154 1.077254353843058 0.9368014396751879 1.0 12.660677043931996 -5.309289860975994 2.911889476034643 1.0369849562091258 0.8780181963043073 0.3299504485080238 0.05189333936313626 0.2517125917369 3.1804154668141273 0.006531689722583477 0.08809036073466558 4.905803390397958e-06 5.309289860975994 -0.15896675990481846 LTTTGQVTS(ph)PVKGASFVTSTNPR ddPTM_A549_PD325901_60min_R1 1 LTTTGQVTSPVKGASFVTSTNPR 23 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTTGQVT(0.228)S(0.771)PVKGASFVTSTNPR 163.39 8.1554e-34 241490000.0 4714.0 3935.3 4617.6 5451.6 5122.6 6367.5 5308.5 6408.0 5903.6 5257.8 5618.9 True False 5192.561809736617 4266.941541936551 4930.978103884517 5788.33295051809 4762.806248010626 6315.645191137893 5510.517872422664 6280.187413021251 5655.4922223220165 4925.821610698236 4927.810921141794 1.053725861814008 0.8658898667621532 1.000642715963215 1.1746256183824744 0.9665156241236351 1.2816330196521688 1.1182486423699582 1.2744375775615404 1.1476682674771976 0.9995963095022532 1.0 12.266731185913182 -6.053500035494428 6.805861691070007 1.1022987021439514 0.9531957688186121 0.26443060196913704 0.10725547929842526 0.23970223057622933 25.380232515067338 0.015234065933611107 0.04132034979759567 8.840970969441725e-07 6.053500035494428 -0.1491029333253393 LTVADIR ddPTM_A549_MK2206_60min_R1 2 LTVADIR 7 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 75.311 0.050385 24390000.0 1830.51 1899.96 1683.42 1674.21 2818.8 1942.65 1754.85 1961.29 3214.0 2967.4 3874.9 False True 2139.4553363272853 1996.6598486147009 1922.154269396828 2084.391525158142 2404.158254041782 2148.2199335732957 2073.683529853675 2239.308863698716 2486.034131703357 2297.0622790511943 2912.655388200498 0.7345377503272323 0.6855118723290781 0.6599319223220489 0.7156327293651875 0.8254180236293328 0.7375468935583598 0.7119563605960408 0.768820394190955 0.8535284132048603 0.7886488351340354 1.0 11.508119303289536 -9.404656567924166 0.40340455954650506 1.0185295772169254 0.6969261261470339 0.3512668212193387 0.07332844004215401 0.27715944005290266 0.10814698381205902 0.03446551677404363 0.018121080580150134 3.938614106884348e-10 9.404656567924166 -0.3216034510698915 LTVADIR ddPTM_A549_PD325901_60min_R1 4 LTVADIR 7 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 92.191 0.034089999999999995 42547500.0 5856.0 6447.099999999999 6061.33 6096.32 7300.2 5934.500000000001 6260.199999999999 6109.95 7492.7 7290.0 9968.1 False True 6450.496809040651 6990.419743099419 6472.688303538274 6472.875840652728 6787.459136322798 5886.171399577205 6498.4353367128815 5988.0822540869485 7177.80787556612 6829.7081558808195 8742.08689299213 0.7378669290294433 0.7996282613826579 0.7404053955042403 0.7404268477177391 0.7764117675110036 0.6733142179467129 0.7433505770712695 0.6849717152648231 0.8210634329567262 0.7812445974834314 1.0 13.093762002692534 -9.834558778877295 0.7351373438667824 0.9861248054706535 0.7386262370578921 0.2547580228236751 0.07201492322541739 0.16424151451634736 0.18460403485292365 0.01896130147702608 0.009299519399110575 1.463663427008605e-10 9.834558778877295 -0.2474985684127614 LTVAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 LTVASPK 7 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 LT(0.125)VAS(0.875)PK 105.1 0.0099065 104310000.0 7220.0 8319.9 8200.5 7234.1 10372.0 7965.3 7900.1 7515.7 10644.0 10316.0 10950.0 True False 8438.559487947623 8743.347372833878 9363.454209994352 9006.45482475109 8846.292539705313 8808.182759061787 9335.445909449249 8581.073490865934 8233.15099497527 7985.608435226842 8230.812795374197 1.025240118775412 1.0622702265501325 1.1376099108045212 1.0942363832904585 1.0747775170730431 1.0701473813147686 1.1342070511791822 1.04255481253183 1.0002840788217644 0.970208973737665 1.0 13.006819188936644 -8.55583621569261 4.047478823478989 1.0003970557945487 1.0862632723826067 0.6378730040313796 0.031193036112011543 0.09943133461469673 3.610841276697657 0.005020112758607084 0.005796573475193581 2.7807617712289117e-09 8.55583621569261 0.08586621658805793 LTVAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LTVASPK 7 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 LT(0.408)VAS(0.592)PK;LT(0.246)VAS(0.754)PK 111.46 0.008105800000000002 418800000.0 29556.0 27471.0 28576.0 25734.0 30592.0 27312.0 26858.0 30026.0 28942.0 28148.0 29831.0 True False 32556.50336202279 29786.07757948288 30515.339201447485 27323.530733845557 28443.323456670627 27089.580127264733 27880.09588726155 29427.10787505866 27725.668388516122 26370.73047623228 26161.97611428941 1.2444206515516523 1.1385255245766401 1.1664003922387312 1.0443985811500576 1.0872008801022934 1.0354561906533 1.0656724004894156 1.124804477555725 1.0597696545320459 1.0079793040491636 1.0 14.675183896784986 -2.0000000000000004 0.26730602982152535 1.0228134747128683 2.43436629666707 0.7281781944219968 0.03673946325366821 17.80756026758527 0.21973907320691952 0.01572015956237006 11.75146397518835 0.00999999999999999 2.0000000000000004 1.4115528219542015 LTVAS(ph)PKR ddPTM_A549_MK2206_60min_R1 3 LTVASPKR 8 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 LTVAS(1)PKR;LTVAS(1)PKR;LTVAS(1)PKR 73.887 0.0021448 79029000.0 22547.199999999997 27507.300000000003 24336.7 25620.6 33019.0 25914.3 24061.6 26343.4 40918.0 36578.0 35044.0 True False 26352.616133885404 28907.304076822205 27788.01000821532 31897.64815015242 28161.94884000481 28656.53402547987 28433.281261604774 30077.657623278967 31650.13833261914 28315.00439547571 26341.607634803036 1.0004179129548578 1.0974009057301926 1.0549094191009538 1.210922605498407 1.069105167400516 1.0878809836806735 1.0794056936767282 1.1418307508133934 1.201526450906602 1.0749155779719908 1.0 14.685055775864527 -4.921533543479156 1.6881421481951333 1.102533552384758 0.8614467609100939 0.19501328910651572 0.05918492892491999 4.657372171124059 6.051286618232589 0.01096361201062954 2.405308791868018 1.1980265879782979e-05 4.921533543479156 -0.24108679147466405 LTVAS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 LTVASPKR 8 1 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 LTVAS(1)PKR;LTVAS(1)PKR 83.869 0.0013677 156816000.0 21579.0 23269.0 21440.0 25889.0 22761.0 22330.0 21861.0 24368.0 26616.0 23928.0 23609.0 True False 23769.68419437981 25229.960292562602 22895.047329193534 27488.10473181503 21162.345881187255 22148.151883487913 22692.932317798222 23881.961123673813 25497.42207963322 22417.18199642197 20705.24266978174 1.1480031687370884 1.2185300455031354 1.105760878746314 1.3275915269485123 1.0220766894015996 1.0696881092735044 1.0959993408296256 1.1534258015979855 1.231447633156477 1.082681442277357 1.0 14.337708491044445 -10.987012051108046 1.253832115466303 0.9997931469457345 1.158537203688141 0.18677288384266055 0.08343143572422079 0.4289697502447114 1.197349959270116 0.058127252179607534 0.013256450417159187 1.0303575289611726e-11 10.987012051108046 0.15874405674240644 LTVDEAVR ddPTM_A549_MK2206_60min_R1 1 LTVDEAVR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 79.906 0.0111 3454800.0 1514.2 1254.3 1345.6 1335.1 1804.4 1157.2 1240.5 1443.0 1918.2 1984.9 1872.1 False True 1769.7599413643059 1318.1385124515352 1536.4263136355592 1662.1995599349154 1538.9751502742272 1279.654135912808 1465.8827927079142 1647.5496690021612 1483.7307627359617 1536.5097114270804 1407.2059026684944 1.2576410730002607 0.9367062133209788 1.091827649899722 1.1812056478606825 1.0936389247343674 0.9093581354982884 1.0416974445091158 1.1707950242945266 1.054380712817046 1.0918869147104815 1.0 10.45861772412859 -2.000000000289324 0.010800603167124912 1.1756041070222981e-09 2.2963633230712865 0.02431081603253782 0.09807853400138328 14002.387126668782 11.36951827738304 1024.7165495202335 1423.5872209324787 0.009999999993338065 2.000000000289324 2.2963633218956825 LTVDEAVR ddPTM_A549_PD325901_60min_R1 2 LTVDEAVR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 113.71 0.0037165999999999996 11017100.0 4631.2 4485.5 4450.299999999999 4123.700000000001 5331.4 4904.299999999999 4657.700000000001 4562.799999999999 5273.0 4833.700000000001 5616.0 False True 5101.356014690751 4863.508826863619 4752.3241198278865 4378.4115833978 4956.94085633152 4864.361006815479 4834.951322291238 4471.791374552645 5051.394147351443 4528.499357075597 4925.267602757179 1.0357520496622352 0.9874608283499181 0.9648864799077155 0.888969277719398 1.0064307680574778 0.9876338504109698 0.9816626653107374 0.9079286112391788 1.0256080592501529 0.9194422968085084 1.0 12.265986396780836 LTVEDLEKER ddPTM_A549_MK2206_60min_R1 1 LTVEDLEKER 10 1 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 0 52.725 0.022846 1828100.0 606.53 652.25 587.7 665.11 917.32 604.28 539.48 706.54 1135.5 800.12 960.56 False True 708.8974357652177 685.4467390149991 671.0446971786695 828.061979857923 782.383443166456 668.2245085113996 637.4965328577715 806.6942086880025 878.3110630208969 619.372336292526 722.0264418926608 0.9818164469253676 0.9493374470029454 0.9293907511470744 1.1468582475834392 1.083593893203662 0.9254848157080933 0.8829268512475671 1.1172640804863054 1.2164527669077663 0.857825005229662 1.0 9.495907861913333 -8.302321526956522 24.704169645933074 1.1061985675004649 0.9897265288198671 0.0 0.11265994190978956 516.5773875801427 312154.9978207037 0.017418159349217557 0.021057649163792564 4.985152784211287e-09 8.302321526956522 -0.11647203868059774 LTVEDLEKER ddPTM_A549_PD325901_60min_R1 1 LTVEDLEKER 10 1 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 0 86.624 0.00075791 2237700.0 670.26 1008.5 1155.9 875.61 1021.5 870.01 826.79 1019.1 873.43 1034.8 850.1 False True 738.304301780667 1093.4898343310585 1234.346324991361 929.6944410454075 949.753363983691 862.9249270108962 858.2539458868475 998.7732510315158 836.7227745346426 969.4625513999273 745.5430892278983 0.9902905847404098 1.466702394711353 1.6556337827095662 1.2470029626432733 1.2739080781598788 1.1574447399204804 1.1511795338022315 1.3396586534869077 1.1222996854563725 1.3003440919879294 1.0 9.542147926346413 -8.60739552950589 0.38316377913262284 0.9942185594169399 1.3689793698916428 0.018300429675274565 0.1858565095849813 0.8424912323767871 0.33215276265574567 0.09363522666832114 0.09910059312344978 2.4694740708899416e-09 8.60739552950589 0.3747608104747029 LTVEEAVR ddPTM_A549_MK2206_60min_R1 2 LTVEEAVR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4;H3BPE1;H3BQK9;A0A5F9ZGX0;Q9UPN3;Q9UPN3-5 Q15149;Q15149-3;Q15149-4;H3BPE1;Q9UPN3 PLEC;MACF1 Plectin;Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 0 ; 80.438 0.010826 2508400.0 1825.98 2288.3 2088.76 1852.0099999999998 2789.9 2363.04 2115.49 2128.3599999999997 3214.7 3042.8 2716.2 False True 2134.1607830751504 2404.764695880448 2384.977576448729 2305.752533139887 2379.5094057581837 2613.0953243409976 2499.847149653902 2430.061547829132 2486.575582821027 2355.429366683621 2041.6925766936415 1.045289975306299 1.177828985289633 1.1681374579472734 1.1293338475442123 1.165459204250823 1.2798671818519796 1.2243993920486331 1.1902191228830459 1.2178991152761296 1.153665049073182 1.0 10.995549936642378 -10.774890333826889 0.9797256269507885 0.9980255615110664 1.1819362920763838 0.10979514558124515 0.07136263460255815 0.32429687428427734 0.5431032670352796 0.042165293282902215 0.010209146429024702 1.6792279960149393e-11 10.774890333826889 0.18391073056531748 LTVEEAVR ddPTM_A549_PD325901_60min_R1 2 LTVEEAVR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4;H3BPE1;H3BQK9;A0A5F9ZGX0;Q9UPN3;Q9UPN3-5 Q15149;Q15149-3;Q15149-4;H3BPE1;Q9UPN3 PLEC;MACF1 Plectin;Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 0 ; 103.56 0.0059001999999999995 5873600.0 2237.2 1968.42 2040.1799999999998 2113.2400000000002 2359.3 2196.7599999999998 1940.12 2276.0 2403.6 2105.93 2479.9 False True 2464.318897060407 2134.3056615705905 2178.638883398975 2243.7700352837405 2193.5909071431442 2178.8703148934574 2013.9523282744003 2230.6033945125405 2302.5850507441555 1972.9612203997374 2174.8880213813254 1.1330785184495415 0.9813404830907294 1.0017246230522099 1.0316715220394044 1.008599470675249 1.001831033815526 0.9260027681771354 1.025617582415038 1.0587143007398268 0.907155311447557 1.0 11.086725407390501 -3.4926468347035815 15.154075243746997 1.0200476897387356 1.0184929276044439 0.0 0.05933353285438641 0.0 0.0 0.006221019335299152 0.0 0.00032162749282245657 3.4926468347035815 -0.0015547621342917317 LTVENS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LTVENSPK 8 0 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LT(0.009)VENS(0.991)PK;LT(0.001)VENS(0.999)PK 127.51 0.0010630000000000001 64737000.0 12128.8 11818.599999999999 11216.7 11370.099999999999 21622.0 14635.900000000001 12606.0 13183.099999999999 21568.6 14451.0 16707.199999999997 True False 14175.844919310124 12420.11625867791 12807.396724253853 14155.775010423182 18441.432442490197 16184.661223475861 14896.347025292993 15051.844796550513 16683.346537976675 11186.509063344618 12558.341144737498 1.1287991587368553 0.9889933802190498 1.0198318851706556 1.1272010249821156 1.46846086039142 1.2887578890352052 1.1861715535204442 1.1985535846713244 1.3284673784298124 0.8907632731439423 1.0 13.61635828802131 -6.5200510594161525 24.97897633086562 1.1964331287026644 1.0457416008890625 0.16155662629021428 0.14859219789278647 155.62491904951594 1374739.0813868286 0.021842099257813195 0.046161446210318625 3.0195966896243584e-07 6.5200510594161525 -0.15069152781360184 LTVENS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LTVENSPK 8 0 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LT(0.183)VENS(0.817)PK;LT(0.062)VENS(0.938)PK 89.31700000000001 0.0026634000000000002 100820000.0 16615.1 16299.5 16351.8 14961.0 15651.900000000001 13909.400000000001 15015.1 15302.1 13732.2 17068.300000000003 20759.0 True False 18301.852720609862 17673.11606810023 17461.531479361318 15885.106991103723 14552.564540123672 13796.126458046881 15586.507847077983 14996.887611234784 13155.083389011845 15990.604625105701 18205.7746021432 1.0052773430719808 0.9707423306240283 0.9591204912152286 0.8725312346355049 0.7993378396770073 0.7577884907145225 0.8561298921740537 0.8237434516776527 0.7225775160076527 0.8783259693450931 1.0 14.152108504066941 -6.2382801128691785 2.882934319469626 0.8487385158228828 0.9842060983802844 0.45193674524364746 0.06861675408993356 0.31022964983834594 5.13752357076096 0.014815167938018578 0.04273841365612069 5.777233050876068e-07 6.2382801128691785 0.13546758255740154 LTVENS(ph)PKQEAGISEGQGTAGEEEEK ddPTM_A549_MK2206_60min_R1 2 LTVENSPKQEAGISEGQGTAGEEEEK 26 1 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK 280.65 1.0273999999999998e-153 622560000.0 9860.7 9893.3 8503.2 7561.2 11373.8 10658.7 9842.3 10811.4 12205.400000000001 12186.0 12677.3 True False 11524.945089031184 10396.82671229911 9709.081621660143 9413.694339435167 9700.729086781756 11786.596559327554 11630.51850920523 12343.949058523882 9440.896388018718 9433.174136455435 9529.176534319386 1.2094376725548137 1.091051957622453 1.0188793949501123 0.9878811989190978 1.0180028727397925 1.2368956034005727 1.220516638275915 1.2953846551238795 0.9907358053465873 0.9899254256106813 1.0 13.218135833405558 LTVENS(ph)PKQEAGISEGQGTAGEEEEK ddPTM_A549_PD325901_60min_R1 4 LTVENSPKQEAGISEGQGTAGEEEEK 26 1 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK 349.99 7.376099999999996e-257 940086000.0 20352.000000000004 19638.7 20663.7 20179.3 24841.899999999998 19618.4 19413.3 19289.699999999997 20762.2 21098.8 21011.7 True False 22418.120057649463 21293.722171023644 22066.0629429224 21425.72953048457 23097.090643902535 19458.63425485978 20152.083754865373 18904.951801023093 19889.636936495375 19766.61816725626 18427.394104140498 1.2165648561568605 1.1555471191794342 1.197459761169612 1.1627107668832224 1.2534105752214195 1.0559623430687668 1.0935937898206318 1.025915639193677 1.0793515797237072 1.0726757161401812 1.0 14.169564447325163 -7.341148814257148 6.595726545816462 1.0427980127594891 1.1927157870853995 0.8004011864298455 0.03516504409978376 0.08522089719862103 5.910748852548082 0.005871833100203707 0.009423825007800195 4.5588067825580444e-08 7.341148814257148 0.14991777432591036 LTVENS(ph)PKQEAGISEGQGTAGEEEEKK ddPTM_A549_MK2206_60min_R1 2 LTVENSPKQEAGISEGQGTAGEEEEKK 27 2 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 LT(0.011)VENS(0.985)PKQEAGIS(0.003)EGQGTAGEEEEKK;LTVENS(1)PKQEAGISEGQGTAGEEEEKK 132.96 6.3889e-25 29358000.0 6253.299999999999 7947.5 6526.4 6163.4 8572.6 7372.799999999999 6409.6 7003.8 10272.1 9294.2 10385.900000000001 True False 7308.704161493471 8351.993803482877 7451.941656741312 7673.433276685541 7311.581896054551 8152.984802331452 7574.141352793748 7996.610098237935 7945.485751173006 7194.633764897765 7806.79439374218 0.9361978544422828 1.0698365272918833 0.9545456535546378 0.9829173012211595 0.9365664736752151 1.0443447580567478 0.970198646305464 1.0243141672397456 1.0177654681852515 0.9215861725095368 1.0 12.930514558814858 -7.272092601877247 24.96255427902021 1.0089763309568027 0.9804161602602124 0.003386417953393228 0.04605761499426844 1111.2942704833192 2603975.6755549083 0.005168363931126978 0.008317725826028405 5.344503897561788e-08 7.272092601877247 -0.028560170696590337 LTVLSEER ddPTM_A549_PD325901_60min_R1 1 LTVLSEER 8 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 89.296 0.0073788 1256200.0 626.06 776.2 952.09 778.9 1164.4 887.44 799.06 858.7 970.22 953.18 1167.8 False True 689.6171503189871 841.6130980741367 1016.7045527822697 827.0108839897534 1082.6165609619277 880.2129828697944 829.46866556241 841.5725548628823 929.4450274309341 892.996052129284 1024.1680032941301 0.6733437757290845 0.8217529695979326 0.9927126697105797 0.8074953340953425 1.0570693064807763 0.8594419861181766 0.809895117690174 0.821713383112977 0.9075122679496632 0.871923404419055 1.0 10.000236677381395 -14.999999999116426 0.020175567422810337 2.125774152303481 5.2930721491591565e-11 0.07677825267134875 0.09996900370211668 2329.4069935870966 3.6501489782291476 257.8737114546889 142.68245210485182 1.0000000020345045e-15 14.999999999116426 -2.1257741522505507 LTVNGVCAS(ph)TPPLTPIK ddPTM_A549_PD325901_60min_R1 1 LTVNGVCASTPPLTPIK 17 0 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 LTVNGVCAS(0.499)T(0.499)PPLT(0.002)PIK 58.83 0.005511 2168100.0 1870.8 1775.7 1928.4 1514.3 1796.6 2436.7 2297.9 2453.5 2218.5 2502.7 2564.6 True False 2060.7222387898296 1925.3444708196923 2059.2728204112323 1607.8348717751749 1670.4130139335268 2416.8563230853088 2385.3478419591274 2404.5630177664843 2125.2641600415664 2344.679094886546 2249.1704583388646 0.9162143452265444 0.8560242571573097 0.9155699216910922 0.7148568334667924 0.7426795989340969 1.0745545381519412 1.0605456038760341 1.0690888317741758 0.9449102233057027 1.0424639387350925 1.0 11.135177287743646 -7.262822643071172 24.999969704047075 0.9948038619765937 0.8290269934410912 0.6446818110438158 0.07217349088371493 77.10079653768996 1393458.044956303 0.011506988206400814 0.019016997817361735 5.459807828855323e-08 7.262822643071172 -0.16577686853550244 LTVS(ph)DGES(ph)GEEKK ddPTM_A549_MK2206_60min_R1 2 LTVSDGESGEEKK 13 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 2 LT(0.068)VS(0.932)DGES(1)GEEKK;LT(0.064)VS(0.937)DGES(0.999)GEEKK 62.165 0.0017829999999999999 25385000.0 8959.3 11499.3 8502.599999999999 8983.3 11298.400000000001 9153.0 8571.1 8225.2 14430.2 12822.5 15693.2 True False 10471.410806145312 12084.565252518485 9708.39653263801 11184.208903275661 9636.420326899983 10121.564384730325 10128.357923884567 9391.147288618555 11161.782740294273 9925.888344386993 11796.145329713809 0.887697676949472 1.0244503534623437 0.823014320464764 0.9481240346457317 0.8169126487977727 0.8580399869468113 0.8586158987353113 0.7961200058262081 0.9462228913184366 0.841451852867924 1.0 13.526027881321303 -8.965077574524665 6.586243442204162 0.976714595998988 0.8782984604045146 0.0020621971713414844 0.0736044581684268 0.15035509958957757 17.23908921208779 0.01086054731587978 0.011316163846469468 1.083733318179317e-09 8.965077574524665 -0.09841613559447338 LTVS(ph)DGES(ph)GEEKK ddPTM_A549_PD325901_60min_R1 1 LTVSDGESGEEKK 13 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 2 LT(0.302)VS(0.699)DGES(1)GEEKK 78.441 0.00020802 26944000.0 6791.8 8426.0 6458.1 6966.6 7962.6 6164.4 6447.4 6258.4 7709.0 7952.6 9046.0 True False 7481.298536141101 9136.088591049565 6896.385501710104 7396.911059703445 7403.3344454787375 6114.199170200302 6692.7593351526575 6133.571302380176 7385.017538769636 7450.471478800798 7933.399347318627 0.9430129769869293 1.1515982230413535 0.869285056731826 0.9323759886363835 0.9331856523749754 0.7706909614056945 0.8436181064570653 0.7731328064877049 0.9308768178001355 0.9391272457901603 1.0 12.953723457107685 -5.776458186780822 24.99984635415548 0.9229275323937707 1.0473056591925434 0.26906724408373384 0.08686257269425932 249.09862380203256 414643.98691226396 0.013479436753554128 0.04214846411031952 1.6731767195808116e-06 5.776458186780822 0.12437812679877269 LTVS(ph)DGESGEEK ddPTM_A549_MK2206_60min_R1 1 LTVSDGESGEEK 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6 P46100-4 ATRX Transcriptional regulator ATRX 1 LT(0.033)VS(0.926)DGES(0.041)GEEK 96.059 0.00025746 10438000.0 1733.0 2444.8 2310.8 2455.3 2769.0 2077.7 1882.7 2413.0 2629.8 2697.2 3048.7 True False 2025.4880322178988 2569.2298774149026 2638.5061872391884 3056.8486102226047 2361.683768072119 2297.5608349343597 2224.7622199364696 2755.0501395025735 2034.1544989276556 2087.900646713245 2291.623650160485 0.8838659140544529 1.1211395366926749 1.1513697666082348 1.3339226142165754 1.0305722616829895 1.0025908201695592 0.9708235555086312 1.202226264033204 0.8876477159699419 0.9111010206964075 1.0 11.162154416614998 -8.071140978824888 0.8821107287685983 0.9537399543743056 1.110515849039335 0.15271981728807515 0.12519698848199853 0.6425487753616621 0.9975559215191638 0.026013010201902387 0.03854608247489848 8.489048624240114e-09 8.071140978824888 0.1567758946650294 LTVVS(ph)PNR ddPTM_A549_MK2206_60min_R1 2 LTVVSPNR 8 0 A0A087X1J2;Q14CZ0 A0A087X1J2 C16orf72 UPF0472 protein C16orf72 1 LTVVS(1)PNR;LTVVS(1)PNR 114.5 0.0013253 55934000.0 9803.5 11676.6 10481.0 9413.0 13603.0 11107.8 10501.8 9634.8 14432.5 14389.400000000001 13766.7 True False 11458.091127436915 12270.889065208961 11967.363401615858 11719.185422565623 11602.01671978514 12283.220023239106 12409.841122498965 11000.562405337503 11163.561793966615 11138.824546127671 10348.048448408941 1.1072707268971715 1.1858167389132843 1.1564850571854342 1.1325019863399943 1.121179203753052 1.187008360511465 1.1992445903562652 1.06305671646028 1.0788084197347436 1.076417896733013 1.0 13.337071093237862 -9.12873215455226 0.6798253447182709 1.0131275560156794 1.1555512669434655 0.5404178420792978 0.03983359152847457 0.23623435792778044 0.23954759370867162 0.0119920514930362 0.009490439447534308 7.434775265806834e-10 9.12873215455226 0.14242371092778616 LTVVS(ph)PNR ddPTM_A549_PD325901_60min_R1 4 LTVVSPNR 8 0 A0A087X1J2;Q14CZ0 A0A087X1J2 C16orf72 UPF0472 protein C16orf72 1 LT(0.001)VVS(0.999)PNR;LTVVS(1)PNR;LTVVS(1)PNR;LTVVS(1)PNR 124.95 0.0011071 83413000.0 19374.6 19004.5 17197.199999999997 20547.5 21734.8 19531.5 20107.2 19435.9 21047.2 20284.300000000003 21667.4 True False 21341.495129173312 20606.07591129855 18364.305407164506 21816.672408241695 20208.22262898945 19372.441939648183 20872.390499082016 19048.23572733141 20162.65937760957 19003.545836259716 19002.44716096525 1.123091933812237 1.0843906438338884 0.9664179172084945 1.1480980435539594 1.0634536940326875 1.019470901592242 1.0984053960143616 1.0024096141922298 1.0610559369967687 1.0000578175687143 1.0 14.213897602297637 -9.376752426699117 0.008936106330228413 3.188482850027194e-05 2.076786851260471 0.24695458425837968 0.0482067779383245 1990.7863291499907 9.095022825629359 1073.0185344047288 1039.892957128545 4.199983394232449e-10 9.376752426699117 2.0767549664319707 LTVVS(ph)PNRATSTETSSSVETDLQPFR ddPTM_A549_MK2206_60min_R1 2 LTVVSPNRATSTETSSSVETDLQPFR 26 1 A0A087X1J2;Q14CZ0 A0A087X1J2 C16orf72 UPF0472 protein C16orf72 1 LT(0.03)VVS(0.913)PNRAT(0.024)S(0.024)T(0.007)ET(0.001)SSSVETDLQPFR;LT(0.012)VVS(0.485)PNRAT(0.154)S(0.154)T(0.154)ET(0.009)S(0.01)S(0.01)S(0.011)VET(0.001)DLQPFR 79.021 1.2834999999999999e-06 9925600.0 1831.6799999999998 2047.6799999999998 1999.2600000000002 2232.5 2963.5 1607.0 1413.92 1669.88 3025.2 2972.0 3444.7 True False 2140.822803723532 2151.898165651566 2282.7851306473153 2779.462600220732 2527.5730757247125 1777.0516733597335 1670.8109619230734 1906.5906037930208 2339.99703025171 2300.623135856355 2589.285921116483 0.8268004650488437 0.831077845865582 0.8816272903778016 1.0734475391664147 0.976166075407709 0.6863095569582677 0.6452786647843938 0.7363383812672613 0.9037229188048566 0.8885164504599559 1.0 11.338338567861127 -9.412839201632975 1.6416555163127193 0.9726053550677727 0.837508746432022 0.09944972045574618 0.11981177915537526 0.4376235472581479 2.4144829329158077 0.02959627604014665 0.024826662866326288 3.8651005665637875e-10 9.412839201632975 -0.13509660863575068 LTVVS(ph)PNRATSTETSSSVETDLQPFR ddPTM_A549_PD325901_60min_R1 2 LTVVSPNRATSTETSSSVETDLQPFR 26 1 A0A087X1J2;Q14CZ0 A0A087X1J2 C16orf72 UPF0472 protein C16orf72 1 LT(0.004)VVS(0.671)PNRAT(0.222)S(0.051)T(0.051)ET(0.001)SSSVETDLQPFR;LT(0.039)VVS(0.879)PNRAT(0.048)S(0.013)T(0.013)ET(0.004)S(0.001)S(0.001)SVETDLQPFR 98.398 8.4164e-10 20487900.0 3557.2 3324.5 3168.8 3900.0 3191.8999999999996 4411.9 3708.1000000000004 3399.1000000000004 4024.1000000000004 4306.700000000001 4735.7 True False 3918.324325327768 3604.6672823337626 3383.8538235423707 4140.894142457357 2967.7119554572128 4375.970949160781 3849.2137746501767 3331.3022839576356 3854.9810711847035 4034.7742270139806 4153.238922075706 0.9434382174598006 0.8679171485112207 0.8147505806988797 0.9970276740996689 0.714553631789141 1.0536285128941627 0.9267980597481295 0.8020974344266034 0.9281866859848412 0.9714765518467888 1.0 12.02002115227818 -9.894850015113214 0.6325936425551031 0.9996388202575953 0.8890187028691722 0.12897516079358873 0.09008656968812603 0.9108432993255374 0.7451732371871226 0.04672345681512219 0.019560167268404684 1.2739429650342288e-10 9.894850015113214 -0.11062011738842314 LTWHS(ph)CPEDEAQ ddPTM_A549_PD325901_60min_R1 1 LTWHSCPEDEAQ 12 0 Q13185 Q13185 CBX3 Chromobox protein homolog 3 1 LTWHS(1)CPEDEAQ 170.4 1.1744999999999999e-15 23217000.0 4863.1 5030.0 4108.8 4598.6 5840.1 4363.5 3546.6 3420.2 6082.8 4972.0 5821.9 True False 5356.798331974995 5453.895752786538 4387.647876221565 4882.645077821648 5429.911523251249 4327.965102713816 3681.5678037739885 3351.9814279050065 5827.161069506803 4658.06707147317 5105.843208064815 1.0491505738981153 1.068167495659084 0.8593385455493733 0.9562857453416077 1.0634700875018173 0.8476494334721599 0.7210499135498039 0.6564990915918575 1.141273014475385 0.9123012363786708 1.0 12.317933520327122 LVARPEPATGYTLEFR ddPTM_A549_PD325901_60min_R1 1 LVARPEPATGYTLEFR 16 1 Q16658 Q16658 FSCN1 Fascin 0 69.805 0.0015997 2381800.0 1964.3 2190.0 2458.2 2470.4 2467.6 3178.9 2910.5 2326.3 3090.7 2449.4 2415.9 False True 2163.714289958769 2374.558985805668 2625.0282343574395 2622.990997314528 2294.2842887578595 3153.0120923609347 3021.2606701867107 2279.9001215529534 2960.808627198769 2294.7444659827806 2118.7596156519 1.0212174491031336 1.1207307182297146 1.238945756264932 1.2379842328208084 1.0828431275588355 1.4881405465106603 1.4259572666326894 1.076054170898228 1.397425458426905 1.083060319363664 1.0 11.0490042003668 -5.495221524427798 2.75760336545642 1.2185608009176074 1.0209319411377515 0.14523242022330896 0.15190624603809158 0.5608650516024739 7.463233140258588 0.02464453491430842 0.19439020340423827 3.1972638370421927e-06 5.495221524427798 -0.1976288597798559 LVAS(ph)GDDSVDSLLQR ddPTM_A549_PD325901_60min_R1 2 LVASGDDSVDSLLQR 15 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 LVAS(1)GDDSVDSLLQR;LVAS(1)GDDSVDSLLQR 101.3 7.1459000000000005e-06 2721100.0 1413.44 1472.6100000000001 1791.69 1620.47 1818.23 1891.8899999999999 1524.93 1913.6 1964.0700000000002 1522.9499999999998 1883.23 True False 1556.9313882804665 1596.7120128252457 1913.2848577072166 1720.5627515456097 1690.5237973529759 1876.48307509413 1582.9620456237153 1875.4317468098416 1881.5269681374068 1426.7906770917264 1651.6046487785613 0.9426780128234017 0.9667640582182235 1.1584399808526695 1.0417521849542177 1.0235644460090356 1.1361575401727506 0.95843884115632 1.135520990569269 1.139211475051783 0.8638814852857822 1.0 10.689652669054338 -5.609290927993342 8.786075203237267 1.0693370683472878 0.9487029036110409 0.12735135242956497 0.0873266702760536 0.21866166258011074 19.52859672072486 0.009178248948366871 0.03575426591738269 2.458719989120612e-06 5.609290927993342 -0.12063416473624688 LVASGDDS(ph)VDSLLQR ddPTM_A549_PD325901_60min_R1 1 LVASGDDSVDSLLQR 15 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 LVAS(0.01)GDDS(0.99)VDSLLQR 78.191 0.00051914 1171900.0 655.03 706.56 849.72 842.29 1041.6 609.85 599.01 836.78 831.66 973.81 1142.5 True False 721.5281633924001 766.1042908725359 907.387108981452 894.3163403206178 968.441609324926 604.8835837951228 621.8056533408495 820.0897664587891 796.7082223755549 912.3234704085455 1001.9797429042159 0.7201025454876631 0.7645905980613937 0.9055942651609011 0.8925493221334614 0.9665281321136491 0.603688435897797 0.620577070289425 0.8184694074570582 0.7951340613596777 0.9105208731707453 1.0 9.968637626421707 -10.467496808656925 0.8104782289407918 0.9993457678647455 0.7894804133700568 0.24756710046971397 0.10935982102909694 0.6066909498551989 0.721632559609748 0.07492862117573316 0.022019816655955263 3.408028291258811e-11 10.467496808656925 -0.20986535449468868 LVASVS(ph)ESGLQAQHGVK ddPTM_A549_MK2206_60min_R1 2 LVASVSESGLQAQHGVK 17 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 LVAS(0.083)VS(0.916)ES(0.001)GLQAQHGVK;LVASVS(0.995)ES(0.005)GLQAQHGVK 211.43 1.7146e-55 19227700.0 6446.5 6781.299999999999 6138.1 5978.1 8518.4 6547.2 5946.9 6857.9 9944.0 8929.400000000001 9660.4 True False 7534.511598206968 7126.43920472582 7008.5748779179785 7442.734768367106 7265.354644256246 7240.020358320373 7027.374752079554 7830.028326437924 7691.699877304966 6912.24233826237 7261.456066523543 1.03760341303203 0.9814063652577653 0.9651748648908879 1.0249645112747134 1.0005368865000335 0.9970480151629655 0.967763859989026 1.0783000344153548 1.0592503496323438 0.9519085807223838 1.0 12.826043150972172 -8.24318974354859 24.99117137058657 1.0325351624125738 0.9958701708493777 0.08050872082902594 0.03682882660929833 935.7004687486079 1281355.3487274514 0.005154504108249529 0.006648152413670519 5.712290118092329e-09 8.24318974354859 -0.036664991563196137 LVASVS(ph)ESGLQAQHGVK ddPTM_A549_PD325901_60min_R1 2 LVASVSESGLQAQHGVK 17 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 LVASVS(0.701)ES(0.298)GLQAQHGVK;LVAS(0.002)VS(0.998)ESGLQAQHGVK 221.85 1.1530999999999998e-108 13778000.0 3305.6 3553.7 3559.7 4080.0 5056.9 4266.9 3860.5 4452.4 4260.2 4499.7 4380.0 True False 3641.1820785458945 3853.182770711235 3801.282648215027 4332.012333647702 4701.720789357926 4232.151781086187 4007.4134400466564 4363.593389159771 4081.1586092445705 4215.588174076394 3841.2877671076276 0.9479066134343779 1.003096618718718 0.9895854928560265 1.1277500141338213 1.2239959811441512 1.101753380031944 1.0432473907218143 1.1359714902186104 1.0624454236912217 1.0974413867593689 1.0 11.90737433096481 -6.106657349832204 8.488792367040084 1.0629681744482162 0.9806452416697621 0.3172182729061934 0.06330444935369534 0.3955738199829928 28.403528379634782 0.01043320917043156 0.027736692804202042 7.822447375491501e-07 6.106657349832204 -0.08232293277845415 LVDFGVSAQLDRT(ph)VGR ddPTM_A549_MK2206_60min_R1 4 LVDFGVSAQLDRTVGR 16 1 Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5;Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;C9J338;I3L2I2;A0A590UJE1;A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;E7ENQ1;G3XAA2;O95819-4;O95819-5;O95819-6;E7EN19;Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q9UKE5-6;A0A0D9SEY1;O95819-6;Q8N4C8-5;Q8N4C8-4 TNIK;MINK1;MAP4K4 TRAF2 and NCK-interacting protein kinase;Mitogen-activated protein kinase kinase kinase kinase 4;Misshapen-like kinase 1 1 LVDFGVS(0.162)AQLDRT(0.838)VGR;LVDFGVS(0.029)AQLDRT(0.971)VGR;LVDFGVSAQLDRT(1)VGR;LVDFGVSAQLDRT(1)VGR 149.47 4.6708e-15 15978200.0 2924.12 2095.98 2616.5699999999997 2828.15 4206.37 3177.66 2294.37 2576.2 4289.28 4529.39 3608.43 True False 3417.6399681298344 2202.656429345587 2987.6389710682165 3521.046876960479 3587.6185451446436 3513.917872040005 2711.2273301936775 2941.384239281614 3317.764928572675 3506.197653202029 2712.357243398364 1.2600257493543912 0.8120819758188774 1.1014916926374148 1.2981501185105293 1.3226939607150154 1.2955217756040684 0.999583420212276 1.084438359453085 1.2232035203503593 1.2926754621780747 1.0 11.405331492390255 -10.969704975945445 1.1781688563806414 0.9980988068933375 1.157190086452173 0.0 0.16928668438969152 0.8628217718096306 2.087083317019995 0.11360529406283533 0.024959905812785968 1.0722474548729567e-11 10.969704975945445 0.1590912795588354 LVDFGVSAQLDRT(ph)VGR ddPTM_A549_PD325901_60min_R1 2 LVDFGVSAQLDRTVGR 16 1 Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5;Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;C9J338;I3L2I2;A0A590UJE1;A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;E7ENQ1;G3XAA2;O95819-4;O95819-5;O95819-6;E7EN19;Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q9UKE5-6;A0A0D9SEY1;O95819-6;Q8N4C8-5;Q8N4C8-4 TNIK;MINK1;MAP4K4 TRAF2 and NCK-interacting protein kinase;Mitogen-activated protein kinase kinase kinase kinase 4;Misshapen-like kinase 1 1 LVDFGVSAQLDRT(1)VGR;LVDFGVS(0.04)AQLDRT(0.96)VGR 121.26 3.4894e-08 20460000.0 1249.8600000000001 1022.3699999999999 1090.58 1305.49 1097.01 1137.15 1288.85 1346.22 1511.23 1368.37 1478.87 True False 1376.7448671016991 1108.5287079078275 1164.593316990293 1386.1271523170922 1019.9598020790487 1127.8894274208806 1337.8978920357818 1319.3685860108399 1447.7182585438877 1281.9708846725155 1296.9783653293282 1.0615017982602328 0.8547010016056439 0.8979280982027638 1.068735754867528 0.7864123483818182 0.8696285594050656 1.0315498915019012 1.0172633725280578 1.1162239072324724 0.9884288889791912 1.0 10.340938699107204 -7.86705000954621 5.913432428682356 1.05218753655782 0.9195975341305035 0.27027472172053024 0.08502938376851846 0.17847012608540802 8.822603636042976 0.013278625498511786 0.018456303060372322 1.358157044120575e-08 7.86705000954621 -0.13259000242731644 LVDFGVSAQLDRT(ph)VGRR ddPTM_A549_MK2206_60min_R1 2 LVDFGVSAQLDRTVGRR 17 2 Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5;Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;C9J338;I3L2I2;A0A590UJE1;A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;E7ENQ1;G3XAA2;O95819-4;O95819-5;O95819-6;E7EN19;Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q9UKE5-6;A0A0D9SEY1;O95819-6;Q8N4C8-5;Q8N4C8-4 TNIK;MINK1;MAP4K4 TRAF2 and NCK-interacting protein kinase;Mitogen-activated protein kinase kinase kinase kinase 4;Misshapen-like kinase 1 1 LVDFGVS(0.005)AQLDRT(0.995)VGRR;LVDFGVSAQLDRT(1)VGRR 94.057 1.3072e-06 7021700.0 1099.6799999999998 1240.74 962.25 755.05 1417.3400000000001 1176.65 981.69 1124.42 1336.3 1594.29 1436.48 True False 1285.2790994052955 1303.8883663709778 1098.711519244811 940.0372838954821 1208.8511635389445 1301.1623220029442 1160.0503657988158 1283.809978391829 1033.6301836326058 1234.1387817175064 1079.7623711688695 1.1903351456987235 1.2075697405156713 1.01754936880735 0.8705964469551467 1.1195529644456244 1.2050450698651443 1.0743570963146571 1.188974549096458 0.9572756110343756 1.1429725786623963 1.0 10.076498130701566 -8.780725420704748 24.98480308245234 0.9798245808846804 1.1038870691523968 0.028480277514023156 0.10712148501932559 249.81834080212712 323634.940601449 0.017370901441855765 0.018506547782897294 1.6568171421012074e-09 8.780725420704748 0.12406248826771638 LVDFGVSAQLDRT(ph)VGRR ddPTM_A549_PD325901_60min_R1 3 LVDFGVSAQLDRTVGRR 17 2 Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5;Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;C9J338;I3L2I2;A0A590UJE1;A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;E7ENQ1;G3XAA2;O95819-4;O95819-5;O95819-6;E7EN19;Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q9UKE5-6;A0A0D9SEY1;O95819-6;Q8N4C8-5;Q8N4C8-4 TNIK;MINK1;MAP4K4 TRAF2 and NCK-interacting protein kinase;Mitogen-activated protein kinase kinase kinase kinase 4;Misshapen-like kinase 1 1 LVDFGVS(0.162)AQLDRT(0.838)VGRR;LVDFGVS(0.008)AQLDRT(0.992)VGRR;LVDFGVS(0.003)AQLDRT(0.997)VGRR 73.11 0.00021422 9252800.0 1783.8200000000002 1798.63 2018.4 1820.98 2369.58 2089.74 1673.46 1753.68 2449.6499999999996 2171.92 2407.08 True False 1964.912093221123 1950.2068623925347 2155.380761625196 1933.4577988543597 2203.1488754072184 2072.7218502910896 1737.1444360524486 1718.7014766646544 2346.699729387343 2034.7846005378128 2111.024419737314 0.9307860557414241 0.9238201340348348 1.021011761623014 0.9158860412874571 1.0436396920890987 0.9818559325566728 0.8228916822613594 0.8141551848455271 1.1116402574250444 0.963884918390007 1.0 11.043727552134534 -8.782197649771875 24.99997698256753 1.0527190073511856 0.9357081215632722 0.2082626328971534 0.07583429799642942 209.53551629114983 252350.5891153258 0.013797456311278891 0.014696146148074563 1.6512101525157188e-09 8.782197649771875 -0.11701088578791341 LVDS(ph)KAK ddPTM_A549_MK2206_60min_R1 2 LVDSKAK 7 1 O14733;O14733-4;O14733-3;O14733-2 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 1 LVDS(1)KAK;LVDS(1)KAK 48.64 0.01577 7909500.0 5193.4 5669.2 5461.8 5568.6 6979.9 4636.7 4528.0 5202.8 7208.0 7587.200000000001 6922.5 True False 6069.91895356055 5957.738064888978 6236.365368471091 6932.907249983958 5953.165956217621 5127.352516407635 5350.678988618648 5940.312832906752 5575.39950881076 5873.246250460748 5203.45219871944 1.1665176736041403 1.144958738422766 1.198505363421201 1.3323668566975848 1.1440800700893694 0.9853751549153209 1.0282940602270623 1.1416099554769912 1.0714808738288892 1.1287210924905091 1.0 12.345253372815039 -7.038246627159242 6.583338089784232 1.040743283805853 1.209142688282856 0.542522174960895 0.06397691523211196 0.1039361082590027 13.365073265762577 0.009205039808399536 0.016278964350030158 9.157003345183464e-08 7.038246627159242 0.16839940447700297 LVDS(ph)KAK ddPTM_A549_PD325901_60min_R1 2 LVDSKAK 7 1 O14733;O14733-4;O14733-3;O14733-2 O14733 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 1 LVDS(1)KAK;LVDS(1)KAK 56.258 0.010607 29124000.0 4415.9 4312.3 5131.8 4523.700000000001 5170.0 4957.9 4380.5 5330.6 4350.9 4478.9 4354.3 True False 4864.198917186239 4675.712655018166 5480.074808020303 4803.118674931887 4806.877035531749 4917.524506186506 4547.202324601577 5224.277001225201 4168.046803662317 4196.101489626143 3818.7487041819068 1.273767742784295 1.224409621376185 1.4350446265341001 1.2577729112345093 1.2587570976502707 1.2877318952151346 1.190757150273319 1.3680599080803884 1.091469255124825 1.0988158202269236 1.0 11.898884270043038 -8.899782496885697 4.623935070705018 1.0390324878525503 1.2844504786018955 0.6879984772976048 0.06708153705376783 0.07615679709923734 2.719931798172674 0.01168081930492344 0.01229819261615585 1.2595560640079037e-09 8.899782496885697 0.24541799074934523 LVDTGDKFR ddPTM_A549_PD325901_60min_R1 1 LVDTGDKFR 9 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 55.567 0.017587000000000002 2121800.0 1941.1 1657.3 1734.3 1819.9 2437.8 2168.4 1701.2 1871.7 2532.7 1918.9 2286.7 False True 2138.1590430377055 1796.9664872948567 1852.0000271931133 1932.3110897072168 2266.5773379534407 2150.741269330729 1765.940096932359 1834.367475179756 2426.2594267014983 1797.7403265184766 2005.4503965856184 1.0661739859923887 0.8960413532811801 0.9234833383793675 0.9635297352639961 1.1302086263576523 1.0724480012033586 0.8805703197341416 0.9146910231750733 1.2098326793982683 0.8964272213260529 1.0 10.969710567201965 -8.747532124684174 24.99967970222413 1.0990876643949248 0.9802573560417939 0.0 0.10717537957336014 273.631793692228 491880.126559127 0.01807596662237669 0.02044460634449964 1.78841323561182e-09 8.747532124684174 -0.11883030835313091 LVDVS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 LVDVSPDR 8 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(1)PDR;LVDVS(1)PDR 65.347 0.0089931 13868000.0 1389.01 1640.7 1454.31 1156.3500000000001 1505.51 1319.71 1245.72 1378.3899999999999 2122.66 1854.42 1788.06 True False 1623.4409299659458 1724.2046220036943 1660.553026295577 1439.655801910525 1284.051473337038 1459.3608362474008 1472.05119913914 1573.7810036423348 1641.8808991914884 1435.5052340493764 1344.0353540544997 1.2078855850544215 1.2828565980815554 1.235498025618337 1.0711442951017403 0.9553703103593885 1.0858053933216885 1.0952473792437525 1.1709372070420396 1.2216054393498574 1.06805615620076 1.0 10.392355372517054 -10.987827042275416 1.2657218953464462 1.0001135494450037 1.1513624767331352 0.1792070399234984 0.08992422430374548 0.5431913044661765 1.5503531597285427 0.07038262408193519 0.016187551664252852 1.0284257870261787e-11 10.987827042275416 0.15124892728813144 LVDVS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 LVDVSPDR 8 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(1)PDR;LVDVS(1)PDR 104.48 0.0020583000000000003 19937900.0 2676.1 2625.9 2646.8 2294.1800000000003 3064.0 2296.7200000000003 2468.7 2413.23 2474.09 2788.9 2934.1 True False 2947.775701959305 2847.1938085968504 2826.427764501371 2435.886288139186 2848.795210226165 2278.016273795089 2562.6477294244737 2365.096234507688 2370.1126011797323 2612.8083780433485 2573.2243007923485 1.145557229912536 1.1064693457621013 1.0983992975781613 0.9466280445855912 1.1070916784630718 0.8852769939618715 0.9958897592547148 0.9191177907730106 0.92106723865849 1.015383065222418 1.0 11.32936150292184 -6.09640582401711 0.8310147257027458 0.958364763411028 1.1650262169282442 0.5452928848863012 0.05783059162348595 0.5163834350136229 0.4933860831819244 0.008755279068970404 0.07501899720506419 8.009292897632352e-07 6.09640582401711 0.2066614535172161 LVDVS(ph)PDRGS(ph)PPSR ddPTM_A549_MK2206_60min_R1 2 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 2 LVDVS(1)PDRGS(0.838)PPS(0.162)R;LVDVS(0.938)PDRGS(0.918)PPS(0.144)R 85.469 0.0005445000000000001 6799300.0 3676.9 4184.3 3225.6000000000004 3084.1000000000004 4070.2 3075.2 2676.9 3092.3 8130.8 5761.6 7384.4 True False 4297.470828425848 4397.262997409677 3683.0385829836946 3839.7046384505097 3471.478971761338 3400.6156228474492 3163.2580796451552 3530.6429947715746 6289.186782219554 4460.050558395014 5550.649680927959 0.7742284372930189 0.7922069037285274 0.6635328825810465 0.6917576966969724 0.6254184953680909 0.6126518188550018 0.5698896996713944 0.6360774319631213 1.1330541727086847 0.8035186536307192 1.0 12.438440927583878 -8.758092555386446 24.999996253412846 1.062831148329284 0.6684248897674218 0.6099443221311038 0.10397663018808086 23.666049117140602 176779.65265595095 0.014059046924379339 0.015624173276252491 1.7454501287900316e-09 8.758092555386446 -0.3944062585618623 LVDVS(ph)PDRGS(ph)PPSR ddPTM_A549_PD325901_60min_R1 1 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 2 LVDVS(0.993)PDRGS(0.956)PPS(0.051)R 40.759 0.029662 14182000.0 620.42 1123.3 771.53 948.67 1092.9 1166.3 1016.9 1062.7 973.72 1186.0 1046.7 True False 683.4045816709358 1217.9644332216928 823.8906653867853 1007.2671913141082 1016.138474300319 1156.8020394855332 1055.5986859690313 1041.5036148279776 932.7979346025122 1111.1157575959737 917.9625355779806 0.7444798182756347 1.326812790300664 0.8975210136087259 1.0972857303810317 1.106949831738529 1.2601843698960666 1.149936566097864 1.134581831460269 1.0161612249406136 1.21041514716761 1.0 9.842291464504443 -8.833177752781388 7.09660037205342 1.0072681238704013 1.0996464677386457 0.0 0.16224448216769974 0.43083723398470414 35.38620149581008 0.02369571510471697 0.025192140754685313 1.4683251824985856e-09 8.833177752781388 0.0923783438682444 LVDVS(ph)PDRGSPPSR ddPTM_A549_MK2206_60min_R1 4 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(0.999)PDRGS(0.001)PPSR;LVDVS(1)PDRGSPPSR;LVDVS(1)PDRGSPPSR;LVDVS(1)PDRGSPPSR 219.84 3.248699999999999e-39 138139000.0 11189.5 12142.2 10944.900000000001 10379.599999999999 16685.9 11815.0 11078.800000000001 11640.5 17963.3 15965.600000000002 16896.000000000004 True False 13078.01404299029 12760.18611647057 12497.051397227875 12922.602465957947 14231.426213678069 13065.25545783774 13091.674553689993 13290.576522536147 13894.641231495618 12358.959871409232 12700.256894122596 1.0297440557318578 1.0047187409552092 0.9839998908219911 1.0175071712083437 1.120562074635204 1.028739463048504 1.03081966473832 1.0464809202943555 1.0940441085034869 0.9731267622727136 1.0 13.6325700589192 -6.538825979976314 24.96879070848194 1.0484575846061133 1.005134463496146 0.13079254212583946 0.03937736047415883 289.1437662855301 452714.73365856736 0.005744960199099833 0.011962334498039736 2.8918383980692096e-07 6.538825979976314 -0.043323121109967166 LVDVS(ph)PDRGSPPSR ddPTM_A549_PD325901_60min_R1 3 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(0.999)PDRGS(0.001)PPSR;LVDVS(0.999)PDRGS(0.001)PPSR;LVDVS(1)PDRGSPPSR 194.13 7.837e-28 241061000.0 20796.300000000003 21068.2 20951.800000000003 22084.5 23692.7 23032.800000000003 22073.800000000003 22403.2 22116.0 24129.5 24244.1 True False 22907.525066573096 22843.691152854342 22373.715141408426 23448.609407461434 22028.606487377754 22845.22851330051 22913.830538246835 21956.350601029582 21186.541430461708 22605.959252033772 21262.22939601233 1.0773811456887648 1.0743789245890936 1.05227512716068 1.1028292927673498 1.0360440609068564 1.0744512293515687 1.0776777030984463 1.0326457396394864 0.9964402620185813 1.0631979756682266 1.0 14.376005254402703 -8.51745734540501 2.90846224392339 0.9982860806732327 1.070126370576115 0.38922943992784675 0.025177006265920465 0.07211666613956613 1.2390131396175432 0.00250673424851493 0.002946428616949072 3.0376844260063677e-09 8.51745734540501 0.07184028990288238 LVDVS(ph)PDRGSPPSRVPQALNFSPEESDSTFSK ddPTM_A549_PD325901_60min_R1 2 LVDVSPDRGSPPSRVPQALNFSPEESDSTFSK 32 2 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(0.985)PDRGS(0.005)PPS(0.005)RVPQALNFS(0.006)PEESDSTFSK;LVDVS(0.921)PDRGS(0.012)PPS(0.012)RVPQALNFS(0.055)PEESDSTFSK 68.453 0.00011549 7204300.0 1502.31 1859.19 2293.8500000000004 1858.87 2431.2 2781.7 2007.49 2787.8 2647.1000000000004 1921.9299999999998 2650.8 True False 1654.823405257831 2015.8704661278725 2449.524455040605 1973.6881780999254 2260.440899184677 2759.0467574696963 2083.88613049068 2732.1951420132077 2535.8515925382144 1800.5790118013733 2324.768404805684 0.7118229075365249 0.8671274359892074 1.053663861732218 0.848982708995865 0.9723294993651707 1.1868049960444604 0.8963843994881123 1.1752547635993782 1.0907975122580753 0.7745197362796553 1.0 11.182871285665342 -4.404577912388458 0.5988856629920916 1.048521625972957 1.1297018598995215e-11 0.28397893312987343 0.1266373425631763 4.795718075533055 0.5565866293328342 0.015795095335127667 4.4081697029495865 3.9393274980755086e-05 4.404577912388458 -1.04852162596166 LVDVSPDRGS(ph)PPSR ddPTM_A549_PD325901_60min_R1 1 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 LVDVS(0.181)PDRGS(0.809)PPS(0.01)R 128.63 9.4942e-09 29496000.0 5633.8 5743.4 5278.4 6328.0 6846.5 6473.5 5497.7 5234.6 7067.0 6765.0 7947.6 True False 6205.7392286156455 6227.416474464052 5636.623965597716 6718.866188069273 6365.6254591427705 6420.781962282083 5706.917981956871 5130.191796535739 6769.998566154497 6337.856745477879 6970.095583987349 0.8903377513031978 0.8934477869673007 0.8086867529545699 0.9639561046343132 0.9132766376643028 0.92118994422871 0.8187718393801627 0.7360289015722414 0.9712920697540302 0.9092926587747325 1.0 12.766962725203275 -8.96811370881995 24.99694384632358 0.9873348257275828 0.8707417540283884 0.26824210849463803 0.06388409439851304 122.66133083095413 96159.85297418859 0.010590631404328168 0.011186600155568962 1.076183405843774e-09 8.96811370881995 -0.11659307169919442 LVEDKPGS(ph)R ddPTM_A549_PD325901_60min_R1 2 LVEDKPGSR 9 1 Q08170;A0A0D9SEM4 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 LVEDKPGS(1)R;LVEDKPGS(1)R 51.841 0.0070266999999999994 14555600.0 4361.4 4377.4 4745.4 4971.0 4934.8 4624.4 4533.4 4983.0 5064.299999999999 4914.8 4915.299999999999 True False 4804.166117307015 4746.298860486639 5067.451380408343 5278.04738003988 4588.196672135797 4586.7404196149355 4705.921017771667 4883.610155912124 4851.465082577643 4604.478689234983 4310.74926065391 1.1144619709517174 1.101038026917543 1.1755384212812336 1.2243921093288637 1.0643617604981739 1.064023941610364 1.0916712462783817 1.1328912587161972 1.1254343013775083 1.0681388340681444 1.0 12.073722933717239 -12.728322624986863 0.2852127026471259 0.775648974531321 1.1337006881113578 0.27413578574511566 0.049022061941443165 8.246905533961437 0.33290365368904384 1.1324765732305004 0.020822428854608964 1.8692929799932179e-13 12.728322624986863 0.35805171358003685 LVEKGETDLIQK ddPTM_A549_PD325901_60min_R1 1 LVEKGETDLIQK 12 1 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial 0 46.063 0.042457999999999996 3347300.0 2306.0 2352.5 2494.6 2760.1 2663.8 3217.7 3247.5 3459.5 3239.0 2730.2 3020.5 False True 2540.1034224125224 2550.7534310994693 2663.898557248421 2930.5851083580915 2476.7038776111167 3191.496118025036 3371.0853896001886 3390.497558574752 3102.876093925909 2557.8147060611527 2648.997648527076 0.958892290381948 0.9629126822810758 1.0056251120983934 1.1062996261954354 0.934958881140661 1.2047938660117747 1.2725890456998388 1.279917164313065 1.171339693582289 0.9655783226094505 1.0 11.371230847712834 -6.451035391726648 1.1532633220177717 1.1174533791148773 0.9616337035977937 0.2753020831136701 0.10770421181579105 0.6678987931691526 1.6333276206587746 0.018510979302501795 0.07390919787904558 3.5396849414391966e-07 6.451035391726648 -0.15581967551708364 LVEKLS(ph)LPQNETVADTTLTK ddPTM_A549_PD325901_60min_R1 2 LVEKLSLPQNETVADTTLTK 20 1 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 LVEKLS(1)LPQNETVADTTLTK;LVEKLS(1)LPQNETVADTTLTK 142.21 2.2339e-21 7350300.0 5067.200000000001 5160.5 5356.5 6248.6 6368.5 5826.4 6251.8 6802.700000000001 6958.5 6214.799999999999 5929.1 True False 5581.618413724521 5595.393445776327 5720.024301251174 6634.561830399761 5921.198530132287 5778.9517301367605 6489.715670116228 6667.014811885086 6666.058443835582 5822.396467375594 5199.8582876616065 1.0734174096568685 1.076066526476935 1.100034651871924 1.275912046707593 1.138723057930694 1.1113671585722338 1.248056256747465 1.2821531747710886 1.2819692528261823 1.1197221434267095 1.0 12.344256590517023 -6.018823793597913 23.949490982744276 1.16207462060069 1.0780690641956456 0.1876790068369255 0.08546636156943191 843.3695803036333 1073024.5336889885 0.01644180328032643 0.044410120804799745 9.575825126659543e-07 6.018823793597913 -0.08400555640504437 LVEPHS(ph)PS(ph)PSSK ddPTM_A549_PD325901_60min_R1 2 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 2 LVEPHS(0.987)PS(0.866)PS(0.126)S(0.022)K;LVEPHS(0.99)PS(0.985)PS(0.013)S(0.011)K 70.529 0.0010503 55526000.0 8196.9 8565.099999999999 8571.5 8500.7 9321.4 9991.5 8100.0 8740.4 10085.1 8930.4 10467.1 True False 9029.043253761154 9286.91103622106 9153.213534616712 9025.768932509563 8666.697021084257 9910.132536671272 8408.249932490075 8566.065865288847 9661.258318879965 8366.533019928398 9179.71305641376 0.9835866544273587 1.011677704863814 0.9971132516197189 0.9832299634031983 0.9441141534406606 1.0795688793068727 0.9159599957882482 0.9331518112435807 1.0524575506344127 0.9114155277525584 1.0 13.164233342597589 -8.781210806969039 24.999631099310143 1.0247716171355625 0.9825623582016 0.0 0.054819115373437734 322.386663437677 407634.37608039426 0.007594645781144006 0.008090672921282653 1.6549664461291372e-09 8.781210806969039 -0.042209258933962546 LVEPHS(ph)PSPSSK ddPTM_A549_MK2206_60min_R1 2 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LVEPHS(0.998)PS(0.002)PSSK;LVEPHS(1)PSPSSK 142.45 3.1366e-12 92201000.0 7106.7 8104.9 7097.8 7598.1 9053.4 6719.4 6954.9 6933.9 10846.7 11078.900000000001 12423.5 True False 8306.13721786667 8517.404791173123 8104.374768818717 9459.634841091669 7721.656852966464 7430.442448023264 8218.515304316223 7916.80155917816 8389.939768620654 8576.168795369786 9338.402078843037 0.8894602253939083 0.912083750438423 0.8678545537442518 1.0129821741691007 0.8268713199296215 0.7956867122757091 0.8800772589280541 0.8477683325624159 0.8984341965344149 0.9183764762924315 1.0 13.188959991968327 -10.215033816296637 0.8014035968989283 0.9956577081205109 0.880608961509272 0.17538950875427928 0.057117093141382067 0.4602135317864566 0.5721489775408489 0.02848189471862018 0.010738540101484471 6.094894375580372e-11 10.215033816296637 -0.11504874661123887 LVEPHS(ph)PSPSSK ddPTM_A549_PD325901_60min_R1 2 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LVEPHS(0.996)PS(0.004)PSSK;LVEPHS(0.867)PS(0.133)PSSK 122.63 3.1289e-06 164729000.0 12973.5 13039.9 14271.400000000001 15208.2 17823.4 16511.8 14763.3 16899.3 15525.5 17553.4 19797.3 True False 14290.560169414091 14138.818136533027 15239.943024899832 16147.575973671808 16571.54587139199 16377.333375269842 15325.125460287743 16562.230204255608 14873.01722638058 16445.075328318017 17362.357605424633 0.8230771704039318 0.8143374568045727 0.8777576969235052 0.930033601463589 0.9544525143413954 0.9432666776862704 0.8826638529493032 0.9539159704371579 0.8566242882668024 0.9471683340504389 1.0 14.083675241773964 -14.999999999009363 0.3189039103317199 2.076621191388153 0.8853159920766293 0.259631965755308 0.049341671808715924 37.5459371875149 0.4954736981263335 26.253167398549863 0.017233818957704847 1.0000000022810257e-15 14.999999999009363 -1.191305199311524 LVEQANS(ph)PK ddPTM_A549_MK2206_60min_R1 2 LVEQANSPK 9 0 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 1 LVEQANS(1)PK;LVEQANS(1)PK 150.86 2.1807e-05 207256000.0 47109.0 47766.0 47510.0 42261.0 67090.0 52245.0 51053.0 56607.0 70666.0 66066.0 66183.0 True False 55059.8474955297 50197.08537491829 54247.632402515905 52614.9468971684 57221.14987358553 57773.53122257579 60328.66925926407 64631.215601666925 54660.26383041356 51141.644715170274 49747.934542123294 1.1067765526809685 1.0090285322783539 1.090449943335488 1.0576307816883836 1.1502216202591167 1.1613252239378289 1.2126869148342572 1.2991738490558125 1.098744386746968 1.028015437944803 1.0 15.602349007965657 -9.910024391208136 1.2087627669123102 1.0166955177287278 1.1309004982113706 0.26844972860964356 0.07423340015310083 0.4182784948796684 1.2329014822733586 0.02494067160478045 0.015343798494664364 1.2301996773740385e-10 9.910024391208136 0.11420498048264283 LVEQANS(ph)PK ddPTM_A549_PD325901_60min_R1 2 LVEQANSPK 9 0 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 1 LVEQANS(1)PK;LVEQANS(1)PK 91.12299999999999 0.0010423 375440000.0 58737.0 56189.0 59440.0 56825.0 71042.0 54613.0 59702.0 57698.0 64807.0 62034.0 65976.0 True False 64699.93700010597 60924.244225312636 63473.95584175668 60334.95119106138 66052.25500159508 54168.24983488241 61973.99228018794 56547.1681267946 62083.38716241323 58117.162653211315 57861.37025632261 1.1181888142898948 1.052934694692187 1.0970005646352763 1.0427501271363078 1.1415605041668961 0.9361729526093162 1.0710771626328004 0.9772870548397632 1.0729678002333392 1.0044207801466773 1.0 15.820312868710385 -7.236837127858372 24.999394273760192 1.0274040760159258 1.086110519160486 0.40225647552245347 0.04602422174730095 791.4887296090602 804265.112629272 0.006624103647495621 0.011470872298610971 5.796460385645876e-08 7.236837127858372 0.058706443144560305 LVES(ph)PK ddPTM_A549_PD325901_60min_R1 2 LVESPK 6 0 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 LVES(1)PK;LVES(1)PK 87.323 0.038897 27162000.0 7090.9 6818.9 7909.2 6888.2 8564.1 7667.0 6989.1 7603.8 7850.5 7999.799999999999 9135.099999999999 True False 7810.762947955313 7393.552633931632 8445.965873883275 7313.668469762767 7962.587160541094 7604.562493985753 7255.074025082273 7452.1362439342965 7520.570785849142 7494.691262745587 8011.540612170062 0.9749389444634714 0.9228627790640336 1.0542249340973562 0.9128916426701775 0.9938896332180349 0.9492010166476492 0.9055778877362656 0.9301751816141339 0.9387171768716864 0.9354868964104923 1.0 12.967863982953844 -10.840386894468223 1.1385717544686689 0.9994685188982656 0.9525537857369011 0.0 0.04447754234911134 0.7006638096395572 1.6408941790299745 0.02521955537743224 0.006480491944117195 1.4441526633788892e-11 10.840386894468223 -0.04691473316136452 LVES(ph)PKEGK ddPTM_A549_MK2206_60min_R1 2 LVESPKEGK 9 1 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 LVES(1)PKEGK;LVES(1)PKEGK 67.153 0.0014065 93707100.0 6242.7 6310.599999999999 5740.6 6007.1 8017.0 5544.2 5596.6 6259.3 8096.3 8316.5 8928.9 True False 7296.3151406385905 6631.782585248068 6554.703400755267 7478.839769668963 6837.7099200556795 6130.883564057894 6613.429776436203 7146.574943302307 6262.5009771343775 6437.796873939903 6711.607704896491 1.087118833735697 0.9881064086045753 0.9766219494582865 1.1143141998917387 1.0187886748903978 0.9134746596683643 0.9853719208903313 1.0648082035677506 0.933085074767635 0.9592033916468586 1.0 12.712442677027965 -7.0160895899736575 24.265374257306593 0.973378780795156 1.037269709435285 0.26391699554803827 0.051470081197083684 532.9254197867707 803728.3367008351 0.0077083829328051644 0.013604805504857778 9.636302172504164e-08 7.0160895899736575 0.06389092864012891 LVES(ph)PKEGK ddPTM_A549_PD325901_60min_R1 4 LVESPKEGK 9 1 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 LVES(1)PKEGK;LVES(1)PKEGK;LVES(1)PKEGK;LVES(1)PKEGK 99.5 0.00022428 286361000.0 20545.100000000002 21222.1 21499.2 21325.4 24122.6 22780.1 22353.3 24271.1 20798.5 22872.0 23986.5 True False 22630.82342749676 23010.56084596642 22958.26499719205 22642.6215245026 22428.311794452242 22594.586418318075 23203.967063695098 23786.993870190385 19924.411373732033 21427.858016640075 21036.312562951396 1.0757980211490856 1.0938495412210227 1.0913635613888695 1.0763588654971876 1.0661712563613643 1.074075427939356 1.1030434632617752 1.1307587201420184 0.9471437217957288 1.0186128368513718 1.0 14.360594217574528 -8.766047702883204 24.999999993800692 0.9750400865177715 1.0879706247316285 0.7711081283028933 0.02403630857438846 33.37455383323475 181055.25477972094 0.004318835383919951 0.004673438416016326 1.7137690568662164e-09 8.766047702883204 0.11293053821385701 LVET(ph)PGRELWR ddPTM_A549_MK2206_60min_R1 1 LVETPGRELWR 11 1 O15370 O15370 SOX12 Transcription factor SOX-12 1 LVET(1)PGRELWR 45.79 0.035309 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LVET(ph)PGRELWR ddPTM_A549_PD325901_60min_R1 1 LVETPGRELWR 11 1 O15370 O15370 SOX12 Transcription factor SOX-12 1 LVET(1)PGRELWR 41.092 0.036774 3428400.0 723.72 650.23 684.85 509.12 704.77 557.99 535.91 566.79 685.19 800.76 794.55 True False 797.1915216254952 705.0271640823835 731.3280393376016 540.5671861045877 655.2693865245081 553.4459144409949 556.3043483112044 555.4849288118469 656.3938471124096 750.199876941443 696.8253870674348 1.144033406963612 1.0117702040814924 1.04951405748199 0.7757570205350091 0.9403638252650156 0.7942390227344509 0.7983411032890058 0.7971651709613878 0.9419775158807289 1.0765966494111716 1.0 9.444653375607453 -5.722267975418634 1.8438298155373567 0.9224189635898972 1.1201262335783138 0.34363135038879067 0.10063329269588467 0.41730825492896334 2.46593596279982 0.014775964902290037 0.10422584961490915 1.895535945984627e-06 5.722267975418634 0.1977072699884166 LVFDNQLT(ph)IKSPSKR ddPTM_A549_PD325901_60min_R1 2 LVFDNQLTIKSPSKR 15 2 J3QLN7;Q99741;J3QR52 J3QLN7 CDC6 Cell division control protein 6 homolog 1 LVFDNQLT(0.918)IKS(0.065)PS(0.017)KR;LVFDNQLT(0.648)IKS(0.345)PS(0.007)KR 117.26 2.9822e-07 50058000.0 3920.3999999999996 4208.5 4680.4 3754.3999999999996 4967.799999999999 5594.8 4878.6 5070.4 4434.4 4451.4 4675.9 True False 4318.396121954059 4563.165064732032 4998.040089531595 3986.300761138953 4618.878865979614 5549.237803750032 5064.257792672354 4969.2668943481485 4248.037589041387 4170.337844319323 4100.793942972272 1.0530634267431804 1.1127516105880295 1.218798154463961 0.9720802402106715 1.1263377117241429 1.3532105930999114 1.2349456868836868 1.2117816606865166 1.0359061313776698 1.0169586432076725 1.0 12.001687537490657 -8.854170875193196 5.903586992760835 1.0158117927098584 1.1620313077745994 0.3095117568288406 0.09517478633549445 0.1882879735490884 9.785193342273942 0.017444601324469688 0.01851322973833182 1.3990367567192747e-09 8.854170875193196 0.14621951506474096 LVFDNQLTIKS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 LVFDNQLTIKSPSK 14 1 J3QLN7;Q99741;J3QR52 J3QLN7 CDC6 Cell division control protein 6 homolog 1 LVFDNQLT(0.04)IKS(0.952)PS(0.008)K;LVFDNQLT(0.04)IKS(0.92)PS(0.04)K 69.188 0.00081826 5028900.0 2996.0 3130.6 3494.6000000000004 2757.2 4354.6 3115.4 2867.3999999999996 3750.7 4833.9 4451.2 4890.9 True False 3501.651554832556 3289.934168126266 3990.1868279063815 3432.71412377541 3714.044108503739 3445.069560164847 3388.3694637732124 4282.37321103701 3739.0293681521025 3445.6708285073414 3676.3545480269995 0.9524792859578242 0.8948903390974314 1.085365074499631 0.9337277128555664 1.0102518840292394 0.9370884976297303 0.9216655846187792 1.164842279245141 1.0170480891617864 0.9372520477810118 1.0 11.84406019166301 LVFDNQLTIKS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 LVFDNQLTIKSPSK 14 1 J3QLN7;Q99741;J3QR52 J3QLN7 CDC6 Cell division control protein 6 homolog 1 LVFDNQLT(0.001)IKS(0.978)PS(0.021)K;LVFDNQLTIKS(0.911)PS(0.089)K 141.22 1.8152999999999998e-13 9567900.0 7996.3 7474.099999999999 7543.799999999999 6547.1 9241.0 7527.9 7369.0 7234.9 7360.1 7928.799999999999 6851.4 True False 8808.07848943507 8103.968637356226 8055.76763255457 6951.499497457069 8591.944039719321 7466.595278267286 7649.431327471522 7090.5942438307475 7050.7805924372005 7428.174214862522 6008.721234603011 1.465882364239354 1.3487010498485283 1.3406792091074275 1.1569016477956722 1.429912239935521 1.242626340404789 1.273054786336233 1.1800504578241122 1.1734244803758211 1.2362321240807725 1.0 12.552842276464839 -9.880854287321167 0.04482057347083663 1.5372306059585391e-10 2.2464071561994565 0.3967654961425966 0.0990145690595541 30.002847425005477 0.4851850588467981 13.665707979975808 10.556785704316637 1.3156661849957045e-10 9.880854287321167 2.2464071560457333 LVFDNQLTIKS(ph)PSKR ddPTM_A549_MK2206_60min_R1 2 LVFDNQLTIKSPSKR 15 2 J3QLN7;Q99741;J3QR52 J3QLN7 CDC6 Cell division control protein 6 homolog 1 LVFDNQLT(0.155)IKS(0.829)PS(0.016)KR;LVFDNQLT(0.116)IKS(0.868)PS(0.016)KR 97.28399999999999 3.0806e-06 25202000.0 2983.0 2729.7 2636.2 2824.2 4145.0 3399.4 2709.7 2477.8999999999996 4568.4 3998.6000000000004 4578.8 True False 3486.4574726520445 2868.6300705086155 3010.0528002423143 3516.1291267831534 3535.2759908482963 3759.1222516609055 3202.0174150750786 2829.14991325049 3533.6646942357233 3095.3134828516927 3441.7575915488 1.0129875158009398 0.8334782430792066 0.8745685075652823 1.021608591905767 1.027171698416277 1.0922100559584413 0.9303436775842665 0.8220073139948724 1.0267035374346527 0.8993409327990451 1.0 11.74892977431625 -6.262839797818564 24.9633361509394 1.000578936920297 0.8996581018673403 0.07808656433522587 0.08265551907495501 129.78847156371748 2313582.916704333 0.010827592704799433 0.026470836236260856 5.459592169255195e-07 6.262839797818564 -0.10092083505295679 LVGATATS(ph)SPPPK ddPTM_A549_MK2206_60min_R1 1 LVGATATSSPPPK 13 0 H9KVD1;Q96QD9-4;Q96QD9 H9KVD1 FYTTD1 UAP56-interacting factor 1 LVGATAT(0.054)S(0.473)S(0.473)PPPK 191.53 1.0132999999999998e-25 23616000.0 6661.1 8654.8 7530.8 6399.8 8931.2 7295.0 6820.1 6385.1 10604.0 10374.0 10834.0 True False 7785.330831740706 9095.292352360317 8598.780679790929 7967.751287297941 7617.432311089101 8066.952057970908 8059.223889195676 7290.207478548647 8202.2109311084 8030.506194944091 8143.618796811329 0.9560038388325701 1.116861260244846 1.0558918454235382 0.978404255663066 0.935386650719916 0.9905856670414828 0.9896366824477715 0.895204903427351 1.007194852283608 0.986110277913361 1.0 12.991454315031799 -6.259379392470951 24.648056301899896 0.9876424231813018 1.050313213520143 0.2583278911411294 0.04792486679378849 160.1034578279969 1915632.2631867544 0.0065720930712271485 0.016497616997146337 5.503267300315085e-07 6.259379392470951 0.06267079033884115 LVGATATS(ph)SPPPK ddPTM_A549_PD325901_60min_R1 2 LVGATATSSPPPK 13 0 H9KVD1;Q96QD9-4;Q96QD9 H9KVD1 FYTTD1 UAP56-interacting factor 1 LVGAT(0.002)AT(0.096)S(0.78)S(0.122)PPPK;LVGAT(0.003)AT(0.074)S(0.462)S(0.462)PPPK 80.96 0.00019819 10333200.0 1877.0500000000002 1757.38 1534.76 2063.0099999999998 2285.56 1595.76 1882.5 1745.46 2204.38 2281.8 2046.49 True False 2067.6067341888247 1905.4805801256455 1638.918042861617 2190.437442264347 2125.030150353953 1582.7646596325421 1954.1395676435254 1710.6454310131192 2111.7375745379427 2137.7267585855748 1794.7847037689708 1.1520082212907985 1.0616764095014952 0.9131557893378296 1.220445793673482 1.184002819887801 0.8818688148549542 1.0887877323335307 0.9531201304651401 1.1765965968527503 1.1910769877280771 1.0 10.809595078329496 -3.7776161452583508 15.470205533565707 1.0712762632162112 1.0736463812521921 0.0 0.11569486223459653 0.0 0.0 0.014461517337385023 0.0 0.00016687214741044118 3.7776161452583508 0.0023701180359809726 LVGATATSS(ph)PPPK ddPTM_A549_MK2206_60min_R1 1 LVGATATSSPPPK 13 0 H9KVD1;Q96QD9-4;Q96QD9 H9KVD1 FYTTD1 UAP56-interacting factor 1 LVGATAT(0.032)S(0.205)S(0.763)PPPK 155.86 2.3691e-18 26184000.0 5027.0 6169.5 5153.7 4693.9 7275.9 6280.2 4794.8 5753.7 7996.1 7559.9 7461.5 True False 5875.434701649955 6483.501197934901 5884.572155606113 5843.905710717175 6205.6247483264515 6944.766595540632 5665.953095103508 6569.304594967247 6184.996117147857 5852.113339421427 5608.60362307621 1.0475753140186066 1.155992049653676 1.049204499208047 1.041953773782984 1.1064473736018425 1.2382345165143909 1.0102252674429224 1.17129058076743 1.1027693402507748 1.0434171734553166 1.0 12.453425911677325 -10.499013600406714 0.848984303716769 1.0007626491283472 1.1036653328025499 0.1788850305148071 0.06449803475765846 0.6176359500842348 0.8098273444215984 0.038397878883495586 0.011379542683185096 3.169468206125821e-11 10.499013600406714 0.10290268367420263 LVGATATSS(ph)PPPK ddPTM_A549_PD325901_60min_R1 2 LVGATATSSPPPK 13 0 H9KVD1;Q96QD9-4;Q96QD9 H9KVD1 FYTTD1 UAP56-interacting factor 1 LVGATAT(0.008)S(0.066)S(0.926)PPPK;LVGATAT(0.165)S(0.258)S(0.577)PPPK 182.1 4.4256e-25 99350000.0 19910.3 20424.6 19949.6 21138.1 27152.0 22675.8 22758.8 23328.3 22820.3 23008.2 25119.0 True False 21931.578998811823 22145.85272213992 21303.499822690257 22443.752428891774 25244.937189314885 22491.13580293752 23624.898588093223 22862.998755802677 21861.242150730908 21555.458325396037 22029.522242460385 0.9955540005556823 1.0052806628486621 0.9670432063038221 1.0188034121608407 1.1459593590575927 1.0209543155496765 1.0724199248659991 1.0378345251507917 0.992361155640265 0.9784805175597217 1.0 14.427150586984654 -3.415129721843673 11.942191933912797 1.0135638886324543 0.710293321613121 0.0 0.04869688068532634 0.0 0.0 0.006525404068180366 0.0 0.00038447692333336384 3.415129721843673 -0.3032705670193333 LVGDTVS(ph)YSK ddPTM_A549_MK2206_60min_R1 1 LVGDTVSYSK 10 0 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 LVGDT(0.064)VS(0.933)YS(0.003)K 112.94 0.00012085 10604000.0 2786.3 3286.8 2807.9 2422.5 4369.9 3694.6 3188.4 3581.6 5723.5 4498.0 4927.8 True False 3256.559321505326 3454.084080942124 3206.102442075866 3016.0126087501585 3727.093498771528 4085.560119723003 3767.691008681913 4089.3027681899807 4427.136388551387 3481.898676003327 3704.091259638806 0.8791790194237493 0.9325051244225929 0.8655570873781603 0.8142382023936031 1.006209954755533 1.1029858157764165 1.0171701355568947 1.1039962251331619 1.1952017588743444 0.9400142793303787 1.0 11.854903928132385 -6.965204049141407 4.1877084825923205 1.0890031991589084 0.8773061185725449 0.590659412340822 0.07043974957367345 0.1059144571885445 4.160445633809502 0.011231862222850572 0.021422884448641218 1.0834177608655258e-07 6.965204049141407 -0.2116970805863635 LVGDTVS(ph)YSK ddPTM_A549_PD325901_60min_R1 4 LVGDTVSYSK 10 0 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 LVGDT(0.044)VS(0.949)YS(0.007)K;LVGDT(0.036)VS(0.964)YSK;LVGDT(0.004)VS(0.996)YS(0.001)K;LVGDT(0.002)VS(0.993)YS(0.005)K 160.88 8.9126e-09 32369300.0 16572.0 17284.6 17753.8 17698.1 19864.4 18921.3 18369.6 17849.6 21368.2 20859.699999999997 20953.0 True False 18254.377240338406 18741.23390230898 18958.6796302722 18791.271441698605 18469.193072459737 18767.21120613703 19068.665180230815 17493.575725259692 20470.168863917163 19542.61498206132 18375.91383201053 0.9933860926437079 1.0198803756720969 1.0317135682932133 1.02260337164645 1.0050761687991112 1.0212940361880054 1.037698878790644 0.9519839875819498 1.113967395094032 1.063490782592723 1.0 14.165528376335338 -8.762153174988317 24.99999829915386 1.0538179313712772 1.0129725332754869 0.29663910367138946 0.03295427102432812 26.99433598316544 945472.9213825604 0.007583248404474403 0.008316515228653674 1.7292063632541957e-09 8.762153174988317 -0.04084539809579035 LVGDVDFEGVR ddPTM_A549_MK2206_60min_R1 1 LVGDVDFEGVR 11 0 B9A062;P13995-2;P13995 B9A062 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase 0 53.327 0.024145 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LVGIIS(ph)SR ddPTM_A549_MK2206_60min_R1 2 LVGIISSR 8 0 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 LVGIIS(0.5)S(0.5)R;LVGIIS(0.5)S(0.5)R 53.968 0.023933000000000003 7535600.0 954.41 750.48 804.03 800.72 2010.98 1050.6299999999999 1001.3299999999999 1080.26 2041.77 1111.69 1307.85 True False 1115.4910749158012 788.6762264407463 918.0535441085011 996.8964359456862 1715.1675059290985 1161.8069692482488 1183.258699574539 1233.3901631575013 1579.3123550367031 860.5584568977636 983.0747501762683 1.1346960897081226 0.8022545857264001 0.933859346854236 1.0140596488384426 1.7446969374623484 1.1818093883907947 1.2036304455611102 1.254625004798822 1.6065028165493291 0.875374387088533 1.0 9.94115730889248 -6.548349501511078 24.99212088664433 1.305002948199065 0.94688336768836 0.24881802214153392 0.24237314894897993 206.99103169614887 203100.6921875073 0.036323428679374714 0.07561519117344478 2.8291143299643446e-07 6.548349501511078 -0.358119580510705 LVGIIS(ph)SR ddPTM_A549_PD325901_60min_R1 1 LVGIISSR 8 0 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 LVGIIS(0.639)S(0.361)R 44.349 0.060351 5220500.0 1085.8 894.73 770.48 775.86 677.23 674.89 710.43 619.85 705.3 835.87 616.52 True False 1196.029616676287 970.1320371552084 822.7694060726229 823.7831100940941 629.6637011166665 669.3939195990663 737.4658024122125 607.486605487082 675.6586937468181 783.0930255495332 540.6919484422816 2.2120351895788626 1.7942416933526228 1.5216971668303894 1.5235719941223282 1.1645516507702953 1.2380319727851903 1.3639296914570873 1.1235355126652689 1.2496185595020823 1.4483164171495475 1.0 9.078663062878789 -2.0000000000008775 0.3511745245148665 1.1017647261692152 14.238682980703548 0.8220828940054797 0.1383873815085738 10.31463703709227 0.1266624524847516 0.027422546223801247 91.20473656467443 0.009999999999979794 2.0000000000008775 13.136918254534333 up LVGMDPEQAS(ph)VTNQNEYAR ddPTM_A549_MK2206_60min_R1 6 LVGMDPEQASVTNQNEYAR 19 0 B4DRN8;Q5W0Z9;Q5W0Z9-4;Q5W0Z9-3 B4DRN8 ZDHHC20 Palmitoyltransferase;Probable palmitoyltransferase ZDHHC20 1 LVGMDPEQAS(0.983)VT(0.017)NQNEYAR;LVGMDPEQAS(0.995)VT(0.005)NQNEYAR;LVGMDPEQAS(0.993)VT(0.007)NQNEYAR;LVGMDPEQAS(0.971)VT(0.029)NQNEYAR;LVGMDPEQAS(1)VTNQNEYAR;LVGMDPEQAS(0.933)VT(0.067)NQNEYAR 192.55 3.6533e-44 33129200.0 6007.65 7034.389999999999 6629.15 6133.4400000000005 10207.43 7514.780000000001 6723.04 6736.37 10448.4 9698.11 10182.91 True False 7021.594447059353 7392.410404691023 7569.263151781483 7636.133075340584 8705.930568700755 8309.989031692758 7944.529343560673 7691.271076767904 8081.854082666261 7507.300215370088 7654.212412981174 0.9173503514419157 0.9657963492303733 0.9889016326414433 0.997637988513367 1.137403837125805 1.0856752574045918 1.0379290402350392 1.004841603784588 1.0558701074142949 0.9808063599904897 1.0 12.902038222629875 -5.854724612231539 1.561324110768824 1.036763419727663 0.9255011303822808 0.45114810186908405 0.0427370282373734 0.34592490420837574 1.4511640712609493 0.006381362067390309 0.041689982483846144 1.3972540842891637e-06 5.854724612231539 -0.11126228934538218 LVGMDPEQAS(ph)VTNQNEYAR ddPTM_A549_PD325901_60min_R1 3 LVGMDPEQASVTNQNEYAR 19 0 B4DRN8;Q5W0Z9;Q5W0Z9-4;Q5W0Z9-3 B4DRN8 ZDHHC20 Palmitoyltransferase;Probable palmitoyltransferase ZDHHC20 1 LVGMDPEQAS(0.998)VT(0.002)NQNEYAR;LVGMDPEQAS(0.999)VT(0.001)NQNEYAR;LVGMDPEQAS(0.988)VT(0.012)NQNEYAR 193.8 3.8692e-45 38076600.0 6173.3 6136.6 6239.1 6969.400000000001 7524.9 6381.9 6996.5 7165.9 7589.900000000001 6834.7 7069.299999999999 True False 6800.008871456738 6653.7528183995755 6662.522844756128 7399.884009344183 6996.3769834957175 6329.927922312198 7262.755636131701 7022.970502960198 7270.9228975882315 6403.155875582799 6199.8209159849175 1.0968073051794711 1.0732169378061052 1.0746314990451147 1.193564154452455 1.1284804961796637 1.0209856071796892 1.1714460360308525 1.132769897409934 1.172763374316459 1.0327969085483786 1.0 12.59801082800807 -10.94966900353023 1.2165608398007144 1.0001271255906314 1.1223938805083178 0.3840065304553265 0.049167071566338115 0.348578319358597 0.9186047960546375 0.03530791744095089 0.00827237148550556 1.122873923859117e-11 10.94966900353023 0.12226675491768635 LVGS(ph)PPWK ddPTM_A549_MK2206_60min_R1 2 LVGSPPWK 8 0 Q86UA6-6;Q86UA6-5;Q86UA6-7;Q86UA6-3;Q86UA6-4;Q86UA6-9;Q86UA6-2;Q86UA6;Q86UA6-8 Q86UA6-6 RPAIN RPA-interacting protein 1 LVGS(1)PPWK;LVGS(1)PPWK 90.62899999999999 0.0026305 28977000.0 8080.099999999999 8057.0 6649.4 6175.7 10227.900000000001 7999.9 8037.7 7967.5 11174.8 11030.7 12503.3 True False 9443.82334052155 8467.06688577056 7592.38490627845 7688.746777237709 8723.389458817204 8846.444108096157 9498.046048326 9096.91752444541 8643.725642488695 8538.857208846139 9398.385536475083 1.004834639297369 0.9009065283510577 0.8078392695013888 0.8180922933409918 0.9281795713701866 0.9412727402768438 1.0106040033646346 0.9679234256926706 0.9197032414708295 0.9085451087005189 1.0 13.198197235222162 -7.08350891731793 3.2684030718407833 0.964414586231911 0.8785592888138649 0.2698902177039294 0.05607879954497608 0.23608922882928748 4.860700086665972 0.008636248826758657 0.015916085276409725 8.250705442276535e-08 7.08350891731793 -0.0858552974180461 LVGS(ph)PPWK ddPTM_A549_PD325901_60min_R1 2 LVGSPPWK 8 0 Q86UA6-6;Q86UA6-5;Q86UA6-7;Q86UA6-3;Q86UA6-4;Q86UA6-9;Q86UA6-2;Q86UA6;Q86UA6-8 Q86UA6-6 RPAIN RPA-interacting protein 1 LVGS(1)PPWK;LVGS(1)PPWK 98.03299999999999 0.0024449000000000003 47231000.0 10589.1 8795.5 8659.400000000001 9283.3 10909.4 10599.4 9460.8 8588.3 10766.9 11869.1 12623.900000000001 True False 11664.097636716582 9536.72765280993 9247.078957202348 9856.708357096 10143.161379386855 10513.08200061987 9820.83592114841 8416.999619108981 10314.404635903335 11119.683000406718 11071.240329495438 1.0535493124145885 0.8613964984034049 0.835234235911829 0.890298472776917 0.9161720888999182 0.9495848421437885 0.8870583266975277 0.7602580531726727 0.9316394847309221 1.0043755414451823 1.0 13.434529238251814 -9.617361010663576 1.3916656793928417 0.9841431608693547 0.893629491637787 0.2386129981199594 0.06980613076533371 0.3861302371713221 1.5201040098182208 0.01738315487452485 0.012986574785192101 2.4134537981503036e-10 9.617361010663576 -0.09051366923156767 LVGTPNPST(ph)PLPNTVPQFIAR ddPTM_A549_MK2206_60min_R1 2 LVGTPNPSTPLPNTVPQFIAR 21 0 B4E3T4;Q93062-4;Q93062-5;Q93062;Q93062-2;Q93062-3;E5RJD7;H0YC46;E5RFP4;H0YBU9;E5RJ31 B4E3T4 RBPMS RNA-binding protein with multiple splicing 1 LVGTPNPS(0.021)T(0.979)PLPNTVPQFIAR;LVGTPNPS(0.007)T(0.992)PLPNTVPQFIAR 165.16 4.4302e-28 7325800.0 3031.4 3226.2 3670.2 3033.3 4219.8 3930.8999999999996 3314.3 3150.8 4950.2 4689.0 5171.4 True False 3543.026209385652 3390.399799785652 4190.689548383791 3776.458636170012 3599.0730099352577 4346.86522887976 3916.465409005917 3597.435548920313 3828.9876038450375 3629.751643348065 3887.1986566208284 0.9114600313392863 0.8721961750040715 1.0780744486125104 0.9715116128005963 0.9258783324091698 1.1182513714538385 1.0075290086693256 0.9254570879193479 0.9850249349421225 0.9337705540635878 1.0 11.924515123648218 -5.737363800535417 24.98568004679757 0.9959863717070502 0.891828014109845 0.31463778233283457 0.058064904067698424 181.03955489289478 187880.2170937922 0.0070253297894087045 0.02718049877658019 1.8307801688276327e-06 5.737363800535417 -0.10415835759720515 LVGTPNPST(ph)PLPNTVPQFIAR ddPTM_A549_PD325901_60min_R1 3 LVGTPNPSTPLPNTVPQFIAR 21 0 B4E3T4;Q93062-4;Q93062-5;Q93062;Q93062-2;Q93062-3;E5RJD7;H0YC46;E5RFP4;H0YBU9;E5RJ31 B4E3T4 RBPMS RNA-binding protein with multiple splicing 1 LVGT(0.001)PNPS(0.098)T(0.901)PLPNTVPQFIAR;LVGTPNPS(0.015)T(0.985)PLPNTVPQFIAR;LVGT(0.063)PNPS(0.05)T(0.884)PLPNT(0.002)VPQFIAR 186.75 1.7811999999999998e-44 12192000.0 7236.200000000001 8621.199999999999 7999.799999999999 7505.599999999999 10040.7 9316.7 9637.5 10757.8 8797.6 8545.0 9220.1 True False 7970.813696991117 9347.738780104035 8542.714534705328 7969.203865545634 9335.475870534547 9240.82788414204 10004.260336342353 10543.227239669166 8427.867466478105 8005.467241701178 8086.086151029466 0.985744345053302 1.1560276016740119 1.0564708778940881 0.9855452584475677 1.154511057162805 1.1428060141265697 1.2372191131142818 1.3038727318440546 1.0422678300805792 0.990029922038609 1.0 12.981225859159757 -8.977285361740392 24.986218211785943 1.018647457858293 1.1295409848181548 0.2484554015859206 0.09115686685007851 174.69922098789183 192172.24617682674 0.016731477621912988 0.01721747989397629 1.053694318281553e-09 8.977285361740392 0.11089352695986188 LVGYLDR ddPTM_A549_PD325901_60min_R1 1 LVGYLDR 7 0 Q5BJH1;C9JIZ6;P07602;P07602-2;P07602-3 Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D 0 84.359 0.039035 3292300.0 1777.8 1627.4 1754.7 1460.1 1508.9 1610.7 1199.4 1438.2 1434.6 1516.9 1675.6 False True 1958.2809472528122 1764.5467093607967 1873.784493868277 1550.2870608723047 1402.9200694224096 1597.582993225883 1245.0438233368639 1409.5139727539265 1374.3087509558857 1421.1226751242268 1469.5118225035478 1.3326064596857534 1.2007706793094117 1.2751067838814567 1.0549673960643224 0.9546844386949616 1.087152188067562 0.8472499535360887 0.9591715773695475 0.9352144909011562 0.9670712772511878 1.0 10.521121250455435 -6.3884119292930235 2.594384290700254 0.9665768542255826 1.2683104937461616 0.8262645151698983 0.060961857925751275 0.08241616516744996 1.0701095788130814 0.008442823110316544 0.0225680805748022 4.088726591124501e-07 6.3884119292930235 0.30173363952057897 LVHDS(ph)LEDLQMTR ddPTM_A549_MK2206_60min_R1 10 LVHDSLEDLQMTR 13 0 A0A2R8YDN7;Q9H7F0;A0A2R8Y635;A0A087WYY3;Q9H7F0-2 A0A2R8YDN7 ATP13A3 Probable cation-transporting ATPase 13A3 1 LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(0.929)LEDLQMT(0.071)R;LVHDS(0.998)LEDLQMT(0.002)R;LVHDS(1)LEDLQMTR 151.8 1.4396e-13 79356600.0 5067.650000000001 6312.77 5171.499999999999 4219.75 6741.820000000001 5434.95 4689.09 4121.75 6903.59 7645.68 8980.710000000001 True False 5922.945427852878 6634.06302897925 5904.896463262702 5253.588939431778 5750.107208834953 6010.07280157217 5541.036956435912 4706.020684829979 5339.937887767885 5918.515577844627 6750.5518520132355 0.8774016639967682 0.9827438073823187 0.8747279619075393 0.7782458463547667 0.8517980951616693 0.890308367867698 0.8208272564832448 0.6971312550434657 0.7910372373742067 0.8767454435713329 1.0 12.720789730769177 -10.837281452698393 1.1437129202502436 0.9979163417978163 0.8379872337549656 0.13063225774931908 0.07746079663207747 0.40255044757808894 0.9537734624506015 0.04938868911432418 0.012802076762608113 1.4545161485554709e-11 10.837281452698393 -0.15992910804285065 LVHDS(ph)LEDLQMTR ddPTM_A549_PD325901_60min_R1 8 LVHDSLEDLQMTR 13 0 A0A2R8YDN7;Q9H7F0;A0A2R8Y635;A0A087WYY3;Q9H7F0-2 A0A2R8YDN7 ATP13A3 Probable cation-transporting ATPase 13A3 1 LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR 169.37 1.071e-29 238214800.0 18151.329999999998 18353.989999999998 19208.19 18324.83 21052.0 19376.71 19551.11 19140.21 20898.51 19803.36 21198.219999999998 True False 19994.039659297097 19900.745150633506 20511.773281629743 19456.713130391516 19573.380145457322 19218.912498087735 20295.1381898279 18758.44349634572 20020.21830122617 18552.97246993743 18590.973326588188 1.0754702999171266 1.0704520307267682 1.1033189559954073 1.0465677503052073 1.0528432159850463 1.0337765624461142 1.0916662529337542 1.0090081442652614 1.076878437160357 0.9979559512036732 1.0 14.182314683786545 -14.999999999977158 0.2696936166055698 0.5448006282633747 1.068928584285812 0.5057835484558437 0.024659641323170715 28.074165543998554 0.3674127009948862 6.885589867044707 0.01073158413533961 1.000000000052596e-15 14.999999999977158 0.5241279560224373 LVHNLT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 LVHNLTSPK 9 0 Q7Z7G8-2;Q7Z7G8-6;Q7Z7G8 Q7Z7G8-2 VPS13B Vacuolar protein sorting-associated protein 13B 1 LVHNLT(0.744)S(0.256)PK 62.466 0.006381100000000001 3549100.0 2646.7 2203.0 2185.8 2392.7 2809.8 2253.7 2626.5 2265.1 2924.8 2920.5 2910.0 True False 3093.3982543976385 2315.123290226207 2495.7793076282746 2978.911607412385 2396.482142119553 2492.185038115016 3103.7010520333206 2586.184861577822 2262.3374699458536 2260.75702162466 2187.3666880857445 1.4142111019825396 1.0584065775694278 1.1409972188121942 1.361871159343363 1.0956014623304033 1.1393540240370172 1.418921239378249 1.182327990850542 1.0342744461952647 1.0335519115010123 1.0 11.094979377356392 -8.737123970969153 4.102091293591826 1.0150472541713993 1.223585057729085 0.37716385060586577 0.11760428606380657 0.15217156843815288 5.626651471777059 0.019426889411117445 0.021455345241215885 1.8317914560745255e-09 8.737123970969153 0.2085378035576857 LVHNLT(ph)SPK ddPTM_A549_PD325901_60min_R1 2 LVHNLTSPK 9 0 Q7Z7G8-2;Q7Z7G8-6;Q7Z7G8 Q7Z7G8-2 VPS13B Vacuolar protein sorting-associated protein 13B 1 LVHNLT(0.5)S(0.5)PK;LVHNLT(0.5)S(0.5)PK 52.58 0.021058 5680100.0 1624.29 1835.3200000000002 1621.58 1474.29 1685.5900000000001 1585.55 1539.02 1782.55 1994.1999999999998 2397.1000000000004 2279.2 True False 1789.1867250609012 1989.988857456101 1731.6301701526888 1565.3535449444764 1567.1999733698178 1572.6378064874273 1597.588248284059 1746.995641866578 1910.390709017304 2245.7466969083553 1998.8728490392034 0.8950978177130717 0.9955554993968863 0.8663033123817906 0.7831181186421606 0.7840418534491189 0.7867623031866914 0.7992445587781987 0.8739903804818325 0.9557339827471117 1.1235065291860944 1.0 10.964970987912764 -8.78145749857354 2.488120792183224 0.9820504123571334 0.8434744372842329 0.5226110139907925 0.0733550868543089 0.18494062177218268 2.24402934985999 0.012360664583403456 0.013307707443226206 1.6540266451104447e-09 8.78145749857354 -0.13857597507290054 LVHNLTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 LVHNLTSPK 9 0 Q7Z7G8-2;Q7Z7G8-6;Q7Z7G8 Q7Z7G8-2 VPS13B Vacuolar protein sorting-associated protein 13B 1 LVHNLT(0.386)S(0.614)PK 58.37 0.0035455999999999994 4583300.0 2055.1 2324.3 2114.7 2219.3 2833.9 2468.8 1949.3 1653.6 2997.0 2633.9 2365.0 True False 2401.9506376289673 2442.596942112017 2414.5962585055854 2763.0285996281636 2417.0370640446286 2730.0467773431915 2303.462577852106 1888.0028639376126 2318.184285225564 2038.9001606770041 1777.705229320545 1.3511523721775935 1.3740168515145785 1.3582658242100496 1.5542670146074882 1.359638833356215 1.5357139824506452 1.29575057768858 1.0620449514339474 1.3040318760335734 1.1469281448062625 1.0 10.795800407787503 -10.423104687886141 0.27441594416824205 0.8547625486332975 1.4389032659391525 0.5222698836439367 0.115127502028816 1.867865545153441 0.21406217338016972 0.35970316121648876 0.07486384051228871 3.774811870732172e-11 10.423104687886141 0.584140717305855 LVHSGPGKGS(ph)PQAGVDLSFATR ddPTM_A549_PD325901_60min_R1 2 LVHSGPGKGSPQAGVDLSFATR 22 1 Q13884 Q13884 SNTB1 Beta-1-syntrophin 1 LVHS(0.077)GPGKGS(0.923)PQAGVDLSFATR;LVHSGPGKGS(1)PQAGVDLSFATR 124.17 6.9784e-16 12026800.0 5711.700000000001 5900.8 6326.1 6020.1 7985.1 7897.5 5952.1 7015.700000000001 8368.1 7102.3 6669.299999999999 True False 6291.547579268699 6398.081124859399 6755.427187929627 6391.947904360909 7424.254123099525 7833.185378407776 6178.610422614096 6875.766359789818 8016.417857851627 6653.859565913896 5849.018380176006 1.0756587123392451 1.0938726310972664 1.1549676798461943 1.0928240413853112 1.2693162579660278 1.339230768184398 1.0563499755027566 1.1755419307782917 1.3705578161664795 1.1376027793767458 1.0 12.513978807327101 -6.7196222436931645 24.969516261754507 1.1877400789582546 1.107200594521142 0.1388978451165379 0.10525276994715396 351.6207600328784 209955.1989968186 0.020633000838658478 0.04295069425004656 1.9071188392867646e-07 6.7196222436931645 -0.08053948443711256 LVHTS(ph)PNYR ddPTM_A549_PD325901_60min_R1 2 LVHTSPNYR 9 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 LVHT(0.225)S(0.775)PNYR;LVHT(0.172)S(0.828)PNYR 72.096 0.00086241 20125400.0 6738.5 6761.3 6739.0 7204.299999999999 7632.8 6993.6 7065.799999999999 6675.4 7015.3 7316.4 8144.700000000001 True False 7422.587559378488 7331.098479784413 7196.349064899026 7649.293248847581 7096.698459730504 6936.646440320692 7334.692885554117 6542.253910250008 6720.471337362904 6854.4412553753655 7142.953533507194 1.0391482353286419 1.0263399370294992 1.00747527351835 1.0708866035548426 0.9935243770577941 0.9711173967156965 1.0268431470465942 0.9159031876044919 0.9408532907063654 0.9596088261279548 1.0 12.802305020971641 -6.965812973405183 7.058424330147561 0.9716498096483878 1.0333597081507286 0.5110361719420813 0.030475518774850455 0.14447675755374637 22.065647089319974 0.004881296172158761 0.009215588249403339 1.0818997653355113e-07 6.965812973405183 0.061709898502340876 LVIEEAER ddPTM_A549_MK2206_60min_R1 1 LVIEEAER 8 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 94.302 0.0070312 1542700.0 910.16 984.09 1120.9 932.67 1200.6 1006.7 1157.0 944.12 1334.5 1220.7 1370.3 False True 1063.7727567244326 1034.175977611761 1279.8604748469813 1161.1741918691475 1023.9933304252031 1113.2283258066234 1367.21192354942 1077.951901246237 1032.237880758597 944.9430221870309 1030.0166916439496 1.0327723476273059 1.0040380762773593 1.2425628489614773 1.1273353153295653 0.9941521712535232 1.080786685145718 1.3273687063918282 1.046538284273608 1.0021564593396077 0.9174055428935453 1.0 10.008452001446145 -8.515034562793932 24.964270122915575 1.0022461624967518 1.1160653732762542 0.28194880678071554 0.09703605872419241 393.79289767600864 1253257.393214812 0.015568432535483104 0.018040117228699463 3.054678000737837e-09 8.515034562793932 0.11381921077950241 LVIEEAER ddPTM_A549_PD325901_60min_R1 2 LVIEEAER 8 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 ; 114.28 0.0036834000000000003 8162200.0 2635.6000000000004 2696.7 3007.5 2729.3999999999996 3173.3 2477.7 2413.6 2898.1000000000004 2999.6 3180.5 2805.8999999999996 False True 2903.1641717738275 2923.9603730694735 3211.607035566676 2897.988839082849 2950.418355290696 2457.522432678816 2505.4508687725966 2840.2951219845327 2873.537243389986 2979.682687212476 2460.792088065592 1.1797681672716935 1.1882191865172869 1.3051110864434279 1.177665050671117 1.1989710018980089 0.998671299618268 1.018148132434102 1.154219869187431 1.1677285770407566 1.210863242637772 1.0 11.264907054531355 -14.999999991844309 0.0609338070704811 0.4589161606574244 1.3945244438469433 0.02797552425376315 0.09217985762401884 214.2507877541724 0.986212917200476 17.806196942406977 3.0784442982699303 1.0000000187791731e-15 14.999999991844309 0.9356082831895189 LVIGDHK ddPTM_A549_MK2206_60min_R1 1 LVIGDHK 7 0 O00193;E9PM92;E9PRZ9 O00193 SMAP;C11orf58 Small acidic protein 0 97.071 0.012563 1553900.0 847.87 873.91 1068.5 1028.5 1297.9 989.03 859.34 815.53 1341.6 988.48 1194.1 False True 990.9697275687187 918.3882862285909 1220.0293669140867 1280.4825461711193 1106.9806293177335 1093.688498135019 1015.4709545228691 931.1338749558788 1037.729742094966 765.1816814708251 897.5720145165587 1.1040559548889957 1.0231917566227196 1.3592551318249453 1.426607030368254 1.233305641680422 1.2184966559191248 1.1313531818054865 1.0373918302894023 1.1561520694848064 0.8525017147320035 1.0 9.809883884496395 -7.8695341937167065 2.6985040364928303 1.073034533971831 1.235299720136394 0.35347123059361507 0.12670376143209122 0.27738846248417953 4.112106995284353 0.01955874889469669 0.02807866297654528 1.3504105005267953e-08 7.8695341937167065 0.16226518616456298 LVIGDHK ddPTM_A549_PD325901_60min_R1 1 LVIGDHK 7 0 O00193;E9PM92;E9PRZ9 O00193 SMAP;C11orf58 Small acidic protein 0 122.79 0.006810200000000001 2515500.0 872.12 907.28 886.62 1132.7 1033.5 1299.1 1059.0 1075.1 1358.1 1329.0 1132.8 False True 960.6569803791892 983.7396696994366 946.7913648791769 1202.6643064516543 960.9105253814431 1288.520560315232 1099.3008245070357 1053.656287100366 1301.0237799199685 1245.0867131914406 993.4727814108496 0.966968595772641 0.9902029407412745 0.9530118817494128 1.2105659349254922 0.9672238065916973 1.2969862732277169 1.1065233442489464 1.0605789175261033 1.3095716402741904 1.2532670612508068 1.0 9.95633663167191 -6.250497455309902 24.083215022320914 1.141593512468997 0.9720752957808216 0.35399851077816413 0.10810628295416448 471.2781790802126 1037279.6125664754 0.01746596610404418 0.04568971271165306 5.616975695373499e-07 6.250497455309902 -0.16951821668817546 LVIIES(ph)DLERAEER ddPTM_A549_PD325901_60min_R1 1 LVIIESDLERAEER 14 1 H7BYY1;P09493-2;P09493-8;P09493-7;F5H7S3;H0YKJ4;H0YK48;A0A494BZZ2;B7Z596;P09493-5;P09493-6;A0A494C0V8;H0YL42;P09493-9;P09493-3;Q6ZN40;A0A0S2Z4G6;P09493-4;P09493-10;P09493;H0YKX5 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 1 LVIIES(1)DLERAEER 141.0 1.846e-13 5796800.0 740.72 934.79 643.75 808.78 1130.2 849.71 1156.8 1167.1 910.33 675.3 859.12 True False 815.9173491107568 1013.568033945791 687.4387461832247 858.736503727349 1050.8186509783325 842.7902434804528 1200.822657025249 1143.8212749277625 872.0719958578491 632.6614427525813 753.4536864103891 1.0829031217538503 1.3452293780320341 0.9123835460389432 1.1397336282453527 1.3946692012148116 1.1185694073589072 1.5937577566926766 1.5181042916880083 1.1574327813200866 0.8396819262597448 1.0 9.557375024173055 -9.453953420761202 1.731416870641941 1.0446909431759355 1.259128229754749 0.25364668226672127 0.20053601152327558 0.3999391788653674 2.440699754326512 0.044338134312871806 0.03684206302783093 3.5159814834310717e-10 9.453953420761202 0.21443728657881356 LVIITAGAR ddPTM_A549_MK2206_60min_R1 2 LVIITAGAR 9 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 155.0 4.0886e-05 10485500.0 3147.8 4590.4 4030.2 3686.7 5666.8 4664.6 4610.3 3642.6 6425.9 5056.4 4381.6 False True 3679.0716836788793 4824.031752816333 4601.742961663219 4589.9416655022505 4833.221226764571 5158.204875889117 5447.931833310191 4158.949704994646 4970.4439100537 3914.1557281776873 3293.5277939919215 1.117061070621681 1.4647004836626454 1.3972078723785946 1.3936246944310768 1.4674906450103047 1.5661640643503156 1.6541326425871825 1.2627644171035792 1.5091549915324296 1.1884386508952254 1.0 11.68541800970192 -10.781299672491102 0.8652122543482968 0.9799626286768623 1.4373568213746803 0.41040064821714994 0.14705739547922977 0.3761006714787185 0.46311389907963724 0.11578338353527157 0.024501865578161114 1.6546278408332424e-11 10.781299672491102 0.457394192697818 LVIITAGAR ddPTM_A549_PD325901_60min_R1 2 LVIITAGAR 9 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 169.06 5.6829e-07 17292400.0 4817.0 4733.9 5442.4 5269.6 6513.4 6056.6 5730.200000000001 6219.6 5823.2 5340.9 5565.4 False True 5306.018293912023 5132.842366623493 5811.753991809834 5595.091223870077 6055.921254010151 6007.277057659334 5948.26589668576 6095.54519881819 5578.471154723481 5003.674662516303 4880.891081977349 1.0871003275415123 1.051619935871233 1.1907157718125874 1.1463257691879063 1.2407409123247168 1.2307746591275426 1.218684415771883 1.2488590907766701 1.142920639086158 1.0251559763323406 1.0 12.252928842735749 -10.107693696799153 0.8736709062322887 1.0114343361585627 1.175557851448107 0.5048836979733455 0.060856960230178746 0.3424706192044057 0.5211381791664544 0.02960648637369528 0.01316157231055868 7.80380310267887e-11 10.107693696799153 0.16412351528954439 LVILEGELERAEER ddPTM_A549_PD325901_60min_R1 2 LVILEGELERAEER 14 1 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YGX3;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72 P67936 TPM4 Tropomyosin alpha-4 chain 0 ; 80.469 0.00051876 2398400.0 441.68 649.04 407.25 460.84000000000003 548.37 666.89 705.35 679.1800000000001 471.52 464.47 641.96 False True 486.51902845236935 703.7368786060777 434.88843399319325 489.305040156423 509.8543829737999 661.4590689466747 732.1924802323302 665.6332220935976 451.70365415496923 435.1432849330537 563.0029897197293 0.8641499909166829 1.2499700560318652 0.7724442710502955 0.8690984756581948 0.9055980026457986 1.1748766543423832 1.3005125969168048 1.1822907413421715 0.8023112885774081 0.7728969346142799 1.0 9.136998773256739 -8.771257197594355 24.997487031093836 0.9066470096754363 1.0409774211553764 0.1611166504948498 0.17520707822490023 360.10338894451655 916868.8281126571 0.03196372715838528 0.034232203424781456 1.6933346778856423e-09 8.771257197594355 0.13433041147994007 LVINGNPITIFQER ddPTM_A549_PD325901_60min_R1 1 LVINGNPITIFQER 14 0 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 126.76 3.6399e-07 37077000.0 6754.3 5986.5 7058.7 6610.6 7777.6 7605.4 6863.7 7641.8 7888.3 7941.9 8006.9 False True 7439.99156374714 6491.003364623575 7537.745829411304 7018.921748238106 7231.32820726339 7543.4641439623365 7124.901859460759 7489.378304123875 7556.782183302183 7440.447078626864 7022.102059921022 1.0595105995697844 0.9243675624812236 1.0734315401699077 0.9995470997636067 1.0297953726045277 1.0742458710500682 1.0146394624661568 1.0665436418063265 1.0761424597390676 1.059575468305077 1.0 12.777687249304554 -6.984733583629423 14.092436007049606 1.0404413645208375 1.012353925934596 0.11066595151988212 0.042239404225750454 3.254103878874593 2995.06545550257 0.006288812917597484 0.011846601229275762 1.0357773656874566e-07 6.984733583629423 -0.02808743858624152 LVINGNPITIFQERDPS(ph)KIK ddPTM_A549_MK2206_60min_R1 2 LVINGNPITIFQERDPSKIK 20 2 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LVINGNPITIFQERDPS(1)KIK;LVINGNPITIFQERDPS(1)KIK 264.08 1.7021999999999997e-111 558300000.0 61734.0 64806.0 66371.0 60808.0 88732.0 70050.0 65743.0 65819.0 97132.0 94906.0 89914.0 True False 72153.18994860914 68104.34859119367 75783.40581324739 75705.96272977491 75679.64034256976 77462.6445045732 77687.65210882411 75149.04481223371 75131.7570879311 73466.66868492041 67585.87229984243 1.0675779936449434 1.0076713708606295 1.121290637147315 1.1201447899334342 1.119755324112998 1.1461366387477074 1.1494658493740448 1.1119046370939405 1.111648848070076 1.0870122140169771 1.0 16.0444340862187 -10.586158704205443 0.8480823474758863 0.9991695423388831 1.1070559943702551 0.1321147623149268 0.04489593014975341 0.42747851288426675 0.5431890292434784 0.028737729308690473 0.007685100206622675 2.593231544507276e-11 10.586158704205443 0.10788645203137204 LVINGNPITIFQERDPS(ph)KIK ddPTM_A549_PD325901_60min_R1 4 LVINGNPITIFQERDPSKIK 20 2 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LVINGNPITIFQERDPS(1)KIK;LVINGNPITIFQERDPS(1)KIK;LVINGNPITIFQERDPS(1)KIK;LVINGNPITIFQERDPS(1)KIK 288.53 4.185399999999998e-144 1305730000.0 131230.0 131895.0 140965.0 141909.0 172957.0 153112.0 153388.0 165104.0 161918.0 162352.0 159385.0 True False 144552.3729935798 143010.25453554277 150531.73259140723 150674.3966312772 160809.09698925828 151865.1066361217 159225.2642771339 161810.87119841794 155113.1495450126 152101.0670128343 139781.65542476004 1.0341297830128195 1.0230974450901433 1.0769062087151602 1.0779268293354871 1.1504306233933295 1.0864451860628148 1.1390998610889946 1.1575973306848946 1.109681732367986 1.0881332500365573 1.0 17.092815512086574 -3.7202666929387136 12.468178354002404 1.072392271598499 0.5618181361304039 0.0 0.051187002549561045 0.0 0.0 0.008227962432098052 0.0 0.00019042909657758327 3.7202666929387136 -0.5105741354680952 LVINGNPITIFQERDPSK ddPTM_A549_MK2206_60min_R1 1 LVINGNPITIFQERDPSK 18 1 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 160.64 8.8625e-23 29435000.0 3479.3 3228.7 3041.8 2910.0 4108.1 3487.2 3222.6 2798.7 4932.4 4905.9 4766.2 False True 4066.5207792820165 3393.0270391072886 3473.1729792038063 3622.9501306348648 3503.803931967164 3856.213189383985 3808.1047059899424 3195.4242956592843 3815.2192754242815 3797.6537827044767 3582.6209995719146 1.1350686493960491 0.9470795374427603 0.9694502934077631 1.011256878991043 0.9780001659080968 1.0763664897416618 1.0629381970476282 0.8919236212932107 1.0649240530550566 1.0600210804208026 1.0 11.806799715607129 LVINGNPITIFQERDPSK ddPTM_A549_PD325901_60min_R1 2 LVINGNPITIFQERDPSK 18 1 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 297.63 1.7526999999999995e-133 99416000.0 13604.7 14259.099999999999 15608.3 14282.0 15663.4 18153.7 17798.3 18235.7 18230.3 17123.3 17560.7 False True 14985.839128749207 15460.764399315807 16667.573098332618 15164.166703224624 14563.25681979652 18005.862286040043 18475.62404610346 17871.974657870098 17464.143888575956 16042.13191571933 15400.84522644907 0.9730530310773372 1.003890641843724 1.0822505423084245 0.9846321081898818 0.9456141273847688 1.1691476682797366 1.1996500045577911 1.1604541435931819 1.1339730795153646 1.0416397074213128 1.0 13.910721910375102 -7.252717048001071 24.964020728572798 1.0908203135046937 1.0021719274555545 0.42895150182469366 0.06475622477987468 783.4884847901741 2242407.040992517 0.012066144504411624 0.020682907639970063 5.588341683825331e-08 7.252717048001071 -0.08864838604913916 LVINGNPITIFQERDPSKIK ddPTM_A549_MK2206_60min_R1 2 LVINGNPITIFQERDPSKIK 20 2 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 136.2 1.3147000000000001e-17 22138000.0 2359.8 2486.8 2376.2 2275.37 3061.7 2617.0 2774.3 2369.67 3851.0 3450.6 3388.7 False True 2758.076548429194 2613.3674980183987 2713.1808906516167 2832.835752145242 2611.327985809464 2893.9292029759945 3278.3543988791353 2705.5779793100137 2978.7546487833292 2671.1070634542193 2547.192266637857 1.082790877058406 1.0259796766216982 1.065165329758501 1.1121405279250545 1.025178986294687 1.1361251527336842 1.28704630656184 1.0621805093972025 1.169426700841515 1.0486476024756164 1.0 11.314692145591843 -6.094996712506072 5.243979238173346 1.0968589702739875 1.0523446015467364 0.06476470554914626 0.07561609725807081 0.6274155583058475 26.830682916519876 0.012205214617438608 0.03356818976232438 8.03532204688057e-07 6.094996712506072 -0.04451436872725112 LVINGNPITIFQERDPSKIK ddPTM_A549_PD325901_60min_R1 2 LVINGNPITIFQERDPSKIK 20 2 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 168.09 1.0055e-34 13524300.0 3631.5 3255.4 3980.3999999999996 4198.4 5037.799999999999 5033.6 4425.3 4572.6 5251.799999999999 5118.0 4356.700000000001 False True 4000.167206630999 3529.743982827294 4250.53388008964 4457.725632741792 4683.962307466503 4992.608030484759 4593.707213117077 4481.395905864692 5031.085109626456 4794.848606556658 3820.853519396759 1.046930269983904 0.9238103384252674 1.1124566431326368 1.1666832057580638 1.2258942363762777 1.3066734972014835 1.202272526229254 1.1728782281536458 1.3167437809604305 1.2549155789970388 1.0 11.899679234613291 -5.943537405763562 4.371752910852109 1.1747685730679722 0.9866345986177024 0.45547239154357677 0.08837566759689289 0.2073081336879535 8.195279568810271 0.0169556530317556 0.05574218231037549 1.1388396894418432e-06 5.943537405763562 -0.1881339744502698 LVINS(ph)GNGAVEDR ddPTM_A549_MK2206_60min_R1 1 LVINSGNGAVEDR 13 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 LVINS(1)GNGAVEDR 123.76 5.3333e-06 5470000.0 6614.1 6250.3 6080.5 5575.4 9646.3 6309.0 6660.5 6329.1 9779.7 9394.9 9580.6 True False 7730.3983807803825 6568.413572810198 6942.806331793262 6941.373250289216 8227.34204837634 6976.6141924247395 7870.62663509154 7226.269307055843 7564.613564971789 7272.58556495857 7201.472608891505 1.073446890742294 0.9120931133863257 0.9640814745613455 0.9638824761645071 1.1424527308787118 0.968776050583163 1.09291905455196 1.0034432816051708 1.0504259303342933 1.009874779774801 1.0 12.81407623403801 LVINS(ph)GNGAVEDR ddPTM_A549_PD325901_60min_R1 1 LVINSGNGAVEDR 13 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 LVINS(1)GNGAVEDR 113.65 2.1366999999999997e-05 11262000.0 4381.7 4901.1 4915.1 5049.4 5629.9 4857.2 5528.3 5114.5 4683.3 5559.4 5923.6 True False 4826.526958362949 5314.132897411944 5248.668242897345 5361.289969980558 5234.4752461006165 4817.644573599528 5738.682481701835 5012.48728525237 4486.477187614453 5208.378535226862 5195.034752794235 0.929065384166472 1.0229253797683742 1.0103239906286021 1.0320027151111744 1.0075919594734506 0.9273556006546979 1.1046475634480002 0.9648611652802364 0.8636086958227426 1.0025685646136342 1.0 12.342917684901526 -8.51755396661188 24.936436286353118 0.9344688858014268 1.0061230774652459 0.10655263159476802 0.057819637932598714 268.6595910165042 1258161.2907578242 0.010576828405338967 0.012169172383138773 3.0370086815501823e-09 8.51755396661188 0.07165419166381903 LVINSGNGAVEDRKPS(ph)GLNGEASK ddPTM_A549_MK2206_60min_R1 2 LVINSGNGAVEDRKPSGLNGEASK 24 2 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 LVINSGNGAVEDRKPS(1)GLNGEASK;LVINSGNGAVEDRKPS(1)GLNGEASK 112.35 2.8017e-12 16148600.0 6645.8 7946.099999999999 8936.2 7842.900000000001 10178.5 7605.0 7282.8 6990.5 10696.8 9816.5 11519.2 True False 7767.4485657897885 8350.522549462765 10203.487532632345 9764.410852081166 8681.256133377416 8409.756052209565 8605.990489909866 7981.424782508396 8273.991879279549 7598.94583214466 8658.66472625337 0.8970723329012402 0.9644122752719242 1.1784135146952879 1.1277040006497925 1.0026091098152292 0.9712532264600677 0.9939165866783369 0.9217847133298095 0.9555736526201921 0.8776117418086873 1.0 13.079928845255921 -6.99110000604035 24.81718568429235 0.9750150560058036 1.0484965862583502 0.19314352147255986 0.07795465375416274 256.0465665252053 713965.7020426054 0.010814592743154099 0.020417477987843838 1.0207044165701996e-07 6.99110000604035 0.07348153025254656 LVINSGNGAVEDRKPS(ph)GLNGEASK ddPTM_A549_PD325901_60min_R1 2 LVINSGNGAVEDRKPSGLNGEASK 24 2 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 LVINSGNGAVEDRKPS(1)GLNGEASK;LVINSGNGAVEDRKPS(1)GLNGEASK 171.79 1.0540999999999998e-41 26372000.0 4235.0 3746.0 4664.1 4551.3 5280.0 4726.9 4855.6 5182.4 4907.1 4585.700000000001 5472.1 True False 4664.934082357776 4061.688566588141 4980.633873511732 4832.423464247739 4909.151015011147 4688.4056935987 5040.382515086272 5079.032966485849 4700.871651899919 4296.158119399542 4799.066390499919 0.9720503328714795 0.8463497347376839 1.0378339177326736 1.0069507422972626 1.0229387584070826 0.9769412031639572 1.0502839729544178 1.0583377167984471 0.9795387830444723 0.8952070610867316 1.0 12.228538056162218 -5.772272859179413 24.994980338401174 1.003450158137275 0.9092000192763718 0.3426697652725329 0.05016667069821996 111.67519899183849 257658.98672155247 0.005100859696617223 0.016088661370782898 1.6893791924850142e-06 5.772272859179413 -0.09425013886090317 LVLAES(ph)PQPK ddPTM_A549_MK2206_60min_R1 2 LVLAESPQPK 10 0 E7EUR8;A0A1B0GVL4;P78312-4;P78312-6;P78312-2;P78312-5;P78312 E7EUR8 FAM193A Protein FAM193A 1 LVLAES(1)PQPK;LVLAES(1)PQPK 172.11 1.5946e-10 34913000.0 12267.900000000001 13624.599999999999 11955.3 11481.4 17962.6 15081.5 13017.5 13617.0 19149.6 18286.5 17875.7 True False 14338.421598641642 14318.033944628216 13650.741310498817 14294.34351541964 15320.325334912342 16677.41431971053 15382.611248750707 15547.251450313537 14812.246175627446 14155.56694947418 13436.670345778126 1.0671112135415937 1.0655938990962162 1.0159318461502596 1.0638307815530355 1.1401876313595853 1.2411865358407534 1.1448231483616034 1.157076198955686 1.1023747546416165 1.0535025854766122 1.0 13.713888057043468 -4.222569756776506 16.177157637425303 1.0788029321938215 1.0898248921177924 0.0 0.06909521976153249 0.0 0.0 0.010755834971765355 0.0 5.990047181988964e-05 4.222569756776506 0.011021959923970925 LVLAES(ph)PQPK ddPTM_A549_PD325901_60min_R1 2 LVLAESPQPK 10 0 E7EUR8;A0A1B0GVL4;P78312-4;P78312-6;P78312-2;P78312-5;P78312 E7EUR8 FAM193A Protein FAM193A 1 LVLAES(1)PQPK;LVLAES(1)PQPK 136.96 4.7051e-07 58093000.0 18395.0 17227.9 19093.9 18261.4 20783.6 19589.2 21190.9 21023.5 19881.7 19533.6 21100.2 True False 20262.446858316725 18679.75559432032 20389.726874948137 19389.3652033515 19323.83163552759 19429.67204997855 21997.331295605414 20604.169799883315 19046.141289474162 18300.245162374977 18505.009165188214 1.0949709171954705 1.0094431960326093 1.1018490557305678 1.0477900891736354 1.0442486930446784 1.0499682478693295 1.1887230694803972 1.113437427453106 1.0292424672398397 0.9889346716348327 1.0 14.175628229727886 -8.93067016226573 5.242108779290876 1.0125396410655527 1.079719774478315 0.3549864946867384 0.045330232715215364 0.1876424930911511 9.22763228538279 0.008254639459868634 0.008666866505544971 1.1730859619917309e-09 8.93067016226573 0.06718013341276219 LVLIRHGES(ph)AWNLENR ddPTM_A549_MK2206_60min_R1 1 LVLIRHGESAWNLENR 16 1 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 1 LVLIRHGES(1)AWNLENR 77.391 0.00011678 2319000.0 1635.2 2261.1 2168.0 1470.6 2595.5 1782.2 1490.2 1416.5 2680.5 2516.1 2342.7 True False 1911.1817831983315 2376.180332061042 2475.4549999716783 1830.8970660177426 2213.7053882380606 1970.7912210713848 1760.9500505387616 1617.2932128493144 2073.371029878919 1947.7112624926583 1760.9429347692353 1.0853172726172324 1.3493795199970129 1.4057553774711484 1.0397253822751926 1.2571136432244228 1.119168135524874 1.0000040408859288 0.9184245445530319 1.1774209083899851 1.1060615446620923 1.0 10.782132442519808 -6.9632971555439935 1.2340286322299028 1.0665763723434474 1.2638874834011724 0.3442204839584977 0.11758022101248808 0.4199705905288128 1.2636591382829174 0.019594690981633786 0.04866395617231734 1.0881852739734982e-07 6.9632971555439935 0.19731111105772503 LVLPSNT(ph)PNVR ddPTM_A549_MK2206_60min_R1 2 LVLPSNTPNVR 11 0 Q03188;H0Y8J2;H0Y9W1 Q03188 CENPC Centromere protein C 1 LVLPSNT(1)PNVR;LVLPSNT(1)PNVR 204.0 2.6558000000000004e-24 27394000.0 8149.4 10441.5 8834.4 7760.4 12851.599999999999 10875.0 10496.9 10351.900000000001 15616.7 12092.7 13085.9 True False 9524.819486299217 10972.927750747593 10087.250761877222 9661.69834837759 10961.146664411568 12025.785281759243 12404.050855925594 11819.313526364154 12079.542384745426 9360.950671255096 9836.309877533069 0.9683325967652441 1.1155532803831905 1.0255116895938101 0.9822482687786904 1.1143555663539757 1.222591137478 1.261047182364339 1.2016003637055424 1.22805630720684 0.9516730143522896 1.0 13.263901470159139 -6.903098560535292 6.340822242334726 1.1391287671357904 1.0303364979872887 0.25710279926598 0.09612234847822046 0.2861423082954372 15.936002381793156 0.01554393157797798 0.02960098192639269 1.249975323602188e-07 6.903098560535292 -0.10879226914850171 LVLPSNT(ph)PNVR ddPTM_A549_PD325901_60min_R1 2 LVLPSNTPNVR 11 0 Q03188;H0Y8J2;H0Y9W1 Q03188 CENPC Centromere protein C 1 LVLPSNT(1)PNVR;LVLPSNT(1)PNVR 204.85 2.0583e-24 38987000.0 7749.799999999999 9537.3 9682.1 9616.1 10331.5 9909.099999999999 10272.0 10093.7 9990.2 10603.3 10874.0 True False 8536.553990898774 10341.041742157258 10339.185529197046 10210.06465725236 9605.851081740082 9828.40357495163 10662.906581054074 9892.373235145527 9570.346635856327 9933.805828429498 9536.566935965377 0.8951391049020753 1.0843568562558876 1.0841622146230363 1.0706226596855324 1.0072651034947822 1.0306018550434166 1.1181074544594154 1.0373096840371658 1.003542123713677 1.0416542866139815 1.0 13.219254289274376 -8.726466401393273 4.878232143965552 1.0015604441084152 1.0462591792357592 0.020971565600175657 0.05631234436377555 0.3020954000780327 16.87186161596328 0.008954365986014684 0.009982300980426467 1.877299647511967e-09 8.726466401393273 0.044698735127344014 LVLVGDGGTGK ddPTM_A549_MK2206_60min_R1 2 LVLVGDGGTGK 11 0 B5MDF5;J3KQE5;P62826;H0YFC6 B5MDF5 RAN GTP-binding nuclear protein Ran 0 ; 105.98 0.00045854 12551600.0 4683.3 4852.2 5595.2 5774.8 6518.3 5380.7 4889.0 5030.9 7752.700000000001 6927.5 7720.8 False True 5473.726544308182 5099.156254578124 6388.683494391857 7189.626259240619 5559.466704739795 5950.082102580406 5777.268015758957 5744.045481485083 5996.725828517927 5362.5729386423 5803.512276760277 0.9431748023050289 0.8786328022424122 1.1008305298112064 1.2388405359338912 0.9579486420666768 1.0252553658595773 0.9954778658595393 0.9897533092997279 1.0332925205536927 0.9240219858095786 1.0 12.502710566047277 -11.054257587922436 1.306732969457679 0.9997925719146987 1.0214761584561456 0.021468908872668058 0.09139120876892985 3.5081611630008553 10.511116841718035 0.06833905164871014 0.014580204965893654 8.825562850349844e-12 11.054257587922436 0.021683586541446864 LVLVGDGGTGK ddPTM_A549_PD325901_60min_R1 2 LVLVGDGGTGK 11 0 B5MDF5;J3KQE5;P62826;H0YFC6 B5MDF5 RAN GTP-binding nuclear protein Ran 0 ; 156.83 9.1797e-13 27226000.0 15090.9 14293.6 13903.3 14592.8 19121.7 18201.5 16133.599999999999 16960.7 18008.7 16561.0 16516.5 False True 16622.91705866659 15498.171835393558 14846.861545334716 15494.16411334661 17778.657758283836 18053.27301868808 16747.57297664467 16622.405533088244 17251.8569659412 15515.335633682054 14485.075206719897 1.1475892821705826 1.0699407227242883 1.0249764901770742 1.0696640433153275 1.2273776631850681 1.2463361605684193 1.1561950999657329 1.147553968195954 1.1910091400794205 1.071125652594762 1.0 13.822279554670722 -4.982561883417198 14.0653206853493 1.1114228557633599 1.2110619348944625 0.0 0.07761651956905387 2535136.7277454333 48260085.73681216 0.013081132595535007 5092609.403515621 1.040969767363722e-05 4.982561883417198 0.09963907913110259 LVNHFVEEFK ddPTM_A549_MK2206_60min_R1 1 LVNHFVEEFK 10 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 102.06 0.00043912 2321000.0 701.49 867.41 798.14 868.09 1047.7 1025.1 1024.6 948.27 1104.6 1278.0 1388.0 False True 819.8843622161183 911.5574639923353 911.328253541234 1080.7720889700413 893.584717879798 1133.5754015936914 1210.7565573627794 1082.690176455079 854.4098636837359 989.2989123904526 1043.3212931488015 0.7858407257669034 0.873707332514229 0.873487639450734 1.0358957456990179 0.8564808594895152 1.086506533545863 1.160482935902371 1.037734189424487 0.8189326426043502 0.948220762757265 1.0 10.026967792139006 -6.047078281711383 5.601792989411349 0.9540165343092348 0.8389615402877271 0.255832481269478 0.09904125044590481 0.2925801486797589 22.265433360669356 0.01648048663519274 0.045994687656460004 8.972670472677309e-07 6.047078281711383 -0.11505499402150776 LVNHFVEEFK ddPTM_A549_PD325901_60min_R1 2 LVNHFVEEFK 10 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 98.04799999999999 0.00054028 9726700.0 2121.6000000000004 2277.5 2547.3 2498.2 2830.2 2928.3 2676.9 2832.7 2983.2 3047.0 2922.8 False True 2336.9832701606297 2469.432917886945 2720.1750961592647 2652.508140176148 2631.41651565995 2904.45289567477 2778.7708943558873 2776.199576289839 2857.826478357448 2854.611899995726 2563.3141291557477 0.9117038148306613 0.9633750658177336 1.0611945938343423 1.0347963638189663 1.0265681001519047 1.133085041212401 1.0840539841564805 1.0830508616609573 1.114895145254281 1.1136410740793288 1.0 11.323794573594007 -5.603087089621737 2.186346768057739 1.0623572180902696 0.9074398100139784 0.6312824612534046 0.03986071671838594 0.22801810763355748 1.8815478033122726 0.0068104454797553145 0.05190529040541104 2.4940945328612335e-06 5.603087089621737 -0.15491740807629117 LVNHFVEEFKR ddPTM_A549_MK2206_60min_R1 2 LVNHFVEEFKR 11 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 65.574 0.0017623 6184700.0 833.5899999999999 775.88 773.62 796.17 942.31 783.41 898.3399999999999 726.8399999999999 930.23 1073.5 1026.6 False True 974.2796126811983 815.3689779485746 883.3309488367578 991.2316857414289 803.6974472705086 866.3099262145287 1061.5567496986919 829.8717958541451 719.5343902720641 830.9956044218703 771.6668872813834 1.2625650118454979 1.0566333626432458 1.1447050060017112 1.2845331348006677 1.0415082732161416 1.122647531587855 1.375667100915271 1.0754275057438583 0.9324417078553359 1.07688384472412 1.0 9.591834389883953 -8.527181822584266 8.420808003213322 0.9698027447372108 1.1773502293173128 0.38351270629619527 0.09952059400788607 0.07041523571363713 48.725272252437826 0.01537414262899302 0.017732807893739534 2.9704221685740247e-09 8.527181822584266 0.20754748458010197 LVNHFVEEFKR ddPTM_A549_PD325901_60min_R1 2 LVNHFVEEFKR 11 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 91.03 9.3472e-05 13756200.0 2258.3 2408.63 2597.6 2469.2 3122.6 3145.1 2909.2 3289.1000000000004 2813.3 2881.4 3118.4 False True 2487.560953527408 2611.6137031877215 2773.8887566377366 2621.7168760399254 2903.2793483851906 3119.487348354582 3019.9111979753243 3223.4963202509643 2695.0667845142843 2699.4679122572015 2734.8565691663075 0.909576385677043 0.9549362597775446 1.0142721150028455 0.9586304838060039 1.061583770468162 1.1406402015830488 1.1042301932842908 1.1786710705759658 0.9854508696724258 0.987060141541575 1.0 11.417249456846802 -6.74724143153167 24.75292866790936 1.0310967848162782 0.9629609837060145 0.28662652466306837 0.06783105223800688 337.5278104025239 588447.0234000129 0.011441956772199606 0.02372384682661436 1.7896107030710881e-07 6.74724143153167 -0.06813580111026374 LVNLQHLDLLNNK ddPTM_A549_MK2206_60min_R1 2 LVNLQHLDLLNNK 13 0 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 0 ; 127.37 5.9996e-08 3625400.0 1298.01 1203.16 1401.46 1293.27 1971.08 1701.8400000000001 1172.4099999999999 1381.65 1669.9 1688.9099999999999 1743.63 False True 1517.0823547023392 1264.3957048881362 1600.2081015960844 1610.121208057096 1681.1367430738865 1881.927579210036 1385.4217210791498 1577.5031186256667 1291.6703162823376 1307.3840580010633 1310.6385492601185 1.15751391225198 0.9647173170680144 1.2209377654117024 1.2285013354490768 1.2826852559944324 1.4358860269083504 1.057058577943742 1.2036141615979468 0.9855274873545503 0.9975168659117402 1.0 10.356054155508964 -8.761650517657403 24.995518871562343 0.9931657466716386 1.1947509906899603 0.38086650784165754 0.11328452132392272 4.258231725091888 504094.68077985564 0.01992927829863971 0.021877505118547007 1.7312089248695132e-09 8.761650517657403 0.20158524401832167 LVNLQHLDLLNNK ddPTM_A549_PD325901_60min_R1 2 LVNLQHLDLLNNK 13 0 Q96AG4 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 0 ; 137.59 1.3519000000000002e-08 5414600.0 2520.8999999999996 1912.9 1887.51 2007.44 2645.7 2016.48 2068.46 2129.71 2255.3 2777.1 2835.3999999999996 False True 2776.8199122115043 2074.106796323133 2015.6077791196865 2131.4350095729746 2459.875159169504 2000.0584554418128 2147.1763772047425 2087.231263324826 2160.5175840170127 2601.753432057148 2486.663775081501 1.11668490933017 0.8340921748679728 0.8105670735697368 0.85714644292959 0.9892270856315832 0.8043139870713966 0.8634767589898108 0.8393701167969186 0.8688418618018438 1.0462827576968563 1.0 11.279995736802944 -10.652322887562411 0.9323537306936357 0.999693949242029 0.8810392920843039 0.24525593288702008 0.08847680495608447 0.7013233422880305 1.0901876527842784 0.054980214796058774 0.014867966216344921 2.2267789767619564e-11 10.652322887562411 -0.11865465715772516 LVNS(ph)TRR ddPTM_A549_MK2206_60min_R1 1 LVNSTRR 7 1 O94885;A0A1B0GVI0;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 LVNS(0.804)T(0.196)RR 52.255 0.01998 7467700.0 796.22 811.81 590.82 760.87 868.86 704.14 619.99 572.23 789.29 1219.6 1061.4 True False 930.6024702899801 853.1276614791359 674.6071600937586 947.2831841567523 741.0518449718826 778.6516274296962 732.6341577194512 653.345354880878 610.517075237132 944.0915129510138 797.8250868502435 1.1664241769633146 1.0693166654450827 0.8455577183678938 1.1873319099259698 0.9288399890977387 0.9759678409007635 0.9182891962094581 0.818908010852653 0.7652267211192992 1.1833314450893238 1.0 9.639928678084997 -7.32665338256103 1.4138340489303045 0.8819854733616216 1.0497268349368505 0.07053225996780388 0.13741881752257637 0.41154099381960046 1.614171412764952 0.01920882891674724 0.03711135354777895 4.713533710501592e-08 7.32665338256103 0.1677413615752289 LVNS(ph)TRR ddPTM_A549_PD325901_60min_R1 1 LVNSTRR 7 1 O94885;A0A1B0GVI0;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 LVNS(0.878)T(0.122)RR 65.305 0.010508 12619000.0 1536.6 1514.8 1424.3 1503.7 2168.3 2082.6 1629.6 1899.1 1669.6 2069.5 1910.9 True False 1692.5945008148674 1642.4575121910632 1520.9615630116757 1596.5801338495216 2016.0060882289158 2065.639996083829 1691.6153197513356 1861.2209606848714 1599.432518190398 1938.831416816921 1675.8714141931443 1.0099787408986711 0.9800617745973259 0.9075645960247788 0.9526865368833815 1.2029598877068566 1.2325766634538249 1.009394459160085 1.1105989068862807 0.9543885674310232 1.1569094146464571 1.0 10.710695743232417 -3.5727099241169675 12.490861524491228 1.0116514963929228 0.6023262579161658 0.0 0.11079417256481458 0.0 0.0 0.014254795937540986 0.0 0.00026747923712535965 3.5727099241169675 -0.40932523847675706 LVNST(ph)RR ddPTM_A549_PD325901_60min_R1 1 LVNSTRR 7 1 O94885;A0A1B0GVI0;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 LVNS(0.438)T(0.562)RR 60.43600000000001 0.017775 12541000.0 896.49 1040.1 997.2 1106.6 1284.0 1108.2 1224.6 1123.5 930.42 1106.1 1364.2 True False 987.5010048389437 1127.7528772312678 1064.8759886507366 1174.9521687290542 1193.8162695595283 1099.1751866225386 1271.2028231268328 1101.090911131301 891.3176830227068 1036.2606572317934 1196.4120483763077 0.8253853730235462 0.942612437547566 0.8900578944318697 0.982063136461742 0.9978303638614288 0.9187262767156745 1.0625125556467157 0.9203275014035756 0.7449922325944017 0.8661402721897851 1.0 10.22449862885555 -8.53002099351203 24.969451677108825 0.8771102073159978 0.9489890889451589 0.14513503078567513 0.07905786366369552 331.1743086426194 1157787.557881966 0.01762567659248705 0.02000753517566095 2.9510665705849764e-09 8.53002099351203 0.07187888162916112 LVNTTIT(ph)PEPEPKPQPNSR ddPTM_A549_MK2206_60min_R1 2 LVNTTITPEPEPKPQPNSR 19 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 LVNT(0.004)T(0.021)IT(0.975)PEPEPKPQPNSR;LVNT(0.005)T(0.026)IT(0.968)PEPEPKPQPNSR 105.16 6.498e-10 7492600.0 2632.6000000000004 3550.2 3599.9 3441.6000000000004 4362.1 3204.8 3461.2 3113.8 5078.7 4795.4 5094.4 True False 3076.9185191095426 3730.89001586976 4110.419951290611 4284.792154499294 3720.4408684389296 3543.9298088259325 4090.055237501517 3555.190685612564 3928.3825590173747 3712.115809450058 3829.319881712719 0.8035156670519116 0.9742957316485833 1.0734073094599152 1.1189433859943971 0.9715670101644547 0.9254723862977094 1.0680892074422834 0.9284130852036454 1.0258695226214292 0.9693929794629118 1.0 11.902872465217031 -5.29015567453144 3.6711545214616397 1.0125192161083447 0.786547919627658 0.5071852682526274 0.05785976603141288 0.1370327664585357 3.373962038720806 0.0074155372787345535 0.08015603034087271 5.126775797955898e-06 5.29015567453144 -0.2259712964806867 LVNTTIT(ph)PEPEPKPQPNSR ddPTM_A549_PD325901_60min_R1 1 LVNTTITPEPEPKPQPNSR 19 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 LVNTT(0.001)IT(0.999)PEPEPKPQPNSR 123.32 8.3924e-15 31838000.0 7825.9 8663.1 8927.7 10366.0 10494.0 11195.0 9894.3 11277.0 10592.0 10555.0 11749.0 True False 8620.379606876913 9393.1698401521 9533.587408621319 11006.284277105891 9756.937642334655 11103.83163169042 10270.833000868712 11052.071388364637 10146.855074672196 9888.55549867243 10303.947483047383 0.8366094277032791 0.911608862099332 0.9252364129676027 1.0681619151508712 0.9469125942642178 1.0776289038700022 0.9967862334087831 1.072605562727111 0.9847541528493188 0.9596861314502642 1.0 13.330909525034242 -5.765012381071996 1.7302039713154682 1.00533995119405 0.8456110523499986 0.5992389663366464 0.04530139479883517 0.20780346362268537 1.0762764407248768 0.005733177172125606 0.039719905005117996 1.7178594129128498e-06 5.765012381071996 -0.1597288988440514 LVNTTITPEPEPKPQPNS(ph)REK ddPTM_A549_MK2206_60min_R1 2 LVNTTITPEPEPKPQPNSREK 21 2 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 LVNTTITPEPEPKPQPNS(1)REK;LVNTTITPEPEPKPQPNS(1)REK 119.33 2.0302e-15 12715800.0 2386.7 2792.4 3082.6000000000004 2763.1 3787.7 2790.8999999999996 2622.7 2228.03 4097.8 3774.2 4216.1 True False 2789.516610787338 2934.5212326952596 3519.7590327088105 3440.0596240402715 3230.5343475358513 3086.231185550515 3099.210641221318 2543.8600755557063 3169.6548428419437 2921.605598704261 3169.1260115595555 0.8802163753073964 0.9259717732874734 1.1106402900579853 1.0854915871102857 1.0193770571925211 0.9738430009704009 0.9779385956622685 0.8027008286438726 1.0001668697554023 0.9218963171699546 1.0 11.62986931031398 -7.264915035669242 22.10115210439194 0.9801477154688898 1.0103997157055626 0.027171277851933517 0.08288188094330563 224.87172975608865 1429938.1585699972 0.012757923281372457 0.020943517730383287 5.4335662208114654e-08 7.264915035669242 0.03025200023667285 LVNTTITPEPEPKPQPNS(ph)REK ddPTM_A549_PD325901_60min_R1 2 LVNTTITPEPEPKPQPNSREK 21 2 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 LVNTTITPEPEPKPQPNS(1)REK;LVNTTITPEPEPKPQPNS(1)REK 166.91 1.9838999999999999e-29 25312000.0 3879.8 4267.9 4268.8 4277.6 5050.200000000001 5932.700000000001 4738.299999999999 5894.6 4630.0 4679.4 5395.200000000001 True False 4273.6744398422 4627.570911196352 4558.506438379727 4541.8176368655395 4695.491374244183 5884.38605818042 4918.618599397249 5777.027578775756 4435.417201258713 4383.9418854086 4731.62460299066 0.9032150262176316 0.9780088868993243 0.9634125318180331 0.9598854554088777 0.9923634624936987 1.243629102456934 1.0395200405984022 1.220939542651871 0.9373983723170417 0.9265193782781702 1.0 12.208119902530996 -6.842929583143523 4.972109994676414 1.0171343900295928 0.9539313398058923 0.13684710712021386 0.1007797527869029 0.488023116613326 21.27649863603523 0.015832251693908794 0.03069317319597954 1.4357222036348128e-07 6.842929583143523 -0.06320305022370054 LVPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 LVPSPK 6 0 P49454 P49454 CENPF Centromere protein F 1 LVPS(1)PK 70.919 0.050181 30799000.0 3563.9 4646.3 3986.0 3269.9 6112.2 4374.4 4326.8 4470.0 6662.2 6084.4 6856.9 True False 4165.399191010601 4882.776824048126 4551.274737032801 4071.0256467913873 5213.103476782382 4837.296104508286 5112.923552993634 5103.636188800873 5153.222337347264 4709.929814200678 5154.142489187332 0.8081653155202876 0.9473499877606231 0.8830323854221602 0.7898550836209569 1.0114395338737223 0.9385258779042788 0.992002755787181 0.9902008335057841 0.9998214733407161 0.9138144364618266 1.0 12.331516706532183 -6.778451928717899 24.999949117629946 0.9945004524469208 0.8653993293917533 0.5735604758554429 0.048638857683657076 96.25496546887038 141446.56962500492 0.0057368476190089975 0.010861008333371969 1.6655131702667175e-07 6.778451928717899 -0.1291011230551674 LVPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 LVPSPK 6 0 P49454 P49454 CENPF Centromere protein F 1 LVPS(1)PK 63.565 0.059756 38822000.0 3108.0 3196.8 3074.5 3417.9 4524.3 4019.1 3511.2 4074.6 3419.7 4039.5 3970.1 True False 3423.52187201133 3466.2055551705753 3283.1540584704044 3629.015920385901 4206.528775987676 3986.3697821283577 3644.820637402361 3993.3289065381373 3275.981901327086 3784.4452806146187 3481.8028685374425 0.9832612589722537 0.995520334161417 0.9429465660270187 1.0422806969282257 1.2081467374270562 1.1449154167084887 1.0468199306566128 1.1469141296375476 0.9408866684928623 1.0869211794877702 1.0 11.765618807974384 -8.783764586454142 24.99627656589817 0.9720853667766554 1.063768185724929 0.030105784988759154 0.08299458777080493 274.3078902346274 307125.61931212834 0.014371677196910033 0.015305501193618058 1.6452633125185594e-09 8.783764586454142 0.09168281894827368 LVPS(ph)QEETKLSVEESEAAGDGVDTK ddPTM_A549_PD325901_60min_R1 2 LVPSQEETKLSVEESEAAGDGVDTK 25 1 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 LVPS(0.906)QEET(0.085)KLS(0.008)VEESEAAGDGVDTK;LVPS(0.988)QEET(0.011)KLSVEESEAAGDGVDTK 135.84 1.8419000000000002e-24 30151000.0 13392.6 13511.3 14619.1 14377.1 15035.7 15201.3 15086.0 15582.5 14574.8 15630.2 17461.0 True False 14752.206892888966 14649.944668911472 15611.240037789785 15265.140814236851 13979.644302349065 15077.505652774944 15660.105985375949 15271.694813265229 13962.271841232277 14643.30650453338 15313.407694398702 0.9633523241391261 0.9566743706738827 1.019449122581646 0.9968480640543838 0.9129022475815427 0.9845950655574823 1.0226401789788475 0.9972760549470168 0.9117677867571802 0.9562408835944184 1.0 13.902507741208895 LVPSDKFS(ph)PR ddPTM_A549_MK2206_60min_R1 2 LVPSDKFSPR 10 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LVPS(0.001)DKFS(0.999)PR;LVPS(0.001)DKFS(0.999)PR 82.85 0.00028381 27261000.0 5978.0 6916.7 6685.9 6075.799999999999 9264.7 7491.7 6250.1 6166.9 9435.7 8492.7 9981.3 True False 6986.940251932252 7268.730486385658 7634.061155124839 7564.371272753029 7901.8749028738775 8284.466721412016 7385.66226739519 7041.076960339176 7298.529015716666 6574.1931715636865 7502.667740134104 0.931260785354646 0.9688194570449864 1.0175128926858736 1.0082242123410123 1.0532086954356636 1.1042027993717256 0.9844048174873831 0.9384764465410437 0.9727911815519384 0.876247409490931 1.0 12.87318795375448 -5.462920499885242 3.4026235862308996 0.9985871449365477 0.93304877025939 0.1009120291124177 0.05568472327383451 0.35753407575881613 7.5027556316706505 0.0062859472236037155 0.045140491152056955 3.444129717780437e-06 5.462920499885242 -0.06553837467715762 LVPSDKFS(ph)PR ddPTM_A549_PD325901_60min_R1 1 LVPSDKFSPR 10 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LVPS(0.003)DKFS(0.997)PR 88.163 0.00019785 23364000.0 7046.6 6439.1 6994.1 7493.5 8851.5 7888.5 8318.9 7930.3 7925.3 7288.0 8690.1 True False 7761.965644567252 6981.745555023416 7468.761684939943 7956.356476026724 8229.801176017265 7824.258671423841 8635.480291776747 7772.123945299998 7592.227201973146 6827.834436222141 7621.272791082649 1.0184605455468307 0.9160865575094598 0.9799887616775569 1.0439668929494483 1.079846031183483 1.0266341181985636 1.1330758691488882 1.0197934332430476 0.9961888794817202 0.8958916211752873 1.0 12.895816239866646 -4.891360217545131 20.78603460117407 1.0113246569221317 2.3122015142175263 0.0007040570071955576 0.06369280752617203 11194.735224570944 2727386.0481281867 0.00744968290468059 189484.73539563053 1.284221044626083e-05 4.891360217545131 1.3008768572953946 LVPSQEETKLS(ph)VEESEAAGDGVDTK ddPTM_A549_PD325901_60min_R1 1 LVPSQEETKLSVEESEAAGDGVDTK 25 1 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 LVPS(0.03)QEET(0.014)KLS(0.957)VEESEAAGDGVDTK 124.2 6.1705e-18 9821100.0 2867.6 3605.8 3139.1 3357.5 4362.0 4408.4 4059.2 4072.9 4106.1 3700.6 4380.1 True False 3158.716640984454 3909.673420556199 3352.1382029417605 3564.885149564253 4055.628168083071 4372.499452000363 4213.67507727947 3991.6628143717585 3933.534896347385 3466.9434844516522 3841.375467741583 0.8222879193950605 1.017779556668739 0.8726400819424573 0.9280230947224005 1.0557749957380373 1.1382640121276761 1.0969183076906484 1.0391233160861861 1.0239912576575037 0.9025265854810942 1.0 11.907407268831752 -6.709783378012053 6.497446742826242 1.0325994598059482 0.9140359021573652 0.4249585552993974 0.07068241838522063 0.14509578018104888 13.431171256441027 0.008804040473258206 0.01832680874307689 1.9508174064316073e-07 6.709783378012053 -0.11856355764858306 LVPTGPTHREPS(ph)PVR ddPTM_A549_MK2206_60min_R1 8 LVPTGPTHREPSPVR 15 1 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 LVPTGPTHREPS(1)PVR;LVPTGPTHREPS(1)PVR;LVPTGPTHREPS(1)PVR;LVPTGPTHREPS(1)PVR;LVPTGPT(0.024)HREPS(0.976)PVR;LVPT(0.02)GPT(0.025)HREPS(0.955)PVR;LVPTGPT(0.023)HREPS(0.977)PVR;LVPTGPT(0.001)HREPS(0.999)PVR 153.36 4.0626999999999995e-15 175687800.0 13940.81 13979.12 14682.199999999999 13039.190000000002 19209.249999999996 14285.539999999999 14094.340000000002 14100.47 22356.25 22830.820000000003 22797.18 True False 16293.677907918973 14690.597498350879 16764.356734586807 16233.792135351487 16383.594771339594 15797.226360826018 16655.09913790798 16099.254803378311 17292.59507059526 17673.321905306864 17136.011035840053 0.9508442702237215 0.8572938864024667 0.9783115043240852 0.9473495378474273 0.9560915161103261 0.9218730267963787 0.9719355982599308 0.9394983914113173 1.0091377178987404 1.0313556561292487 1.0 14.06474369386712 -8.759141385229785 24.98276648989866 1.004315036052393 0.9400816033083061 0.512226781051911 0.031420823422991156 35.52936886043444 386259.71675910585 0.004955365076893799 0.005489949133682029 1.7412399178037614e-09 8.759141385229785 -0.06423343274408677 LVPTGPTHREPS(ph)PVR ddPTM_A549_PD325901_60min_R1 4 LVPTGPTHREPSPVR 15 1 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 LVPTGPT(0.002)HREPS(0.998)PVR;LVPTGPTHREPS(1)PVR;LVPTGPT(0.027)HREPS(0.973)PVR;LVPTGPTHREPS(1)PVR 163.56 1.8121e-20 300167000.0 13612.89 13334.919999999998 13056.79 12403.380000000001 15304.59 13971.119999999999 12181.11 14701.79 14539.23 13021.91 17038.23 True False 14994.86057152005 14458.700507305815 13942.902286256565 13169.508612480191 14229.648396369214 13857.343830830065 12644.668806809163 14408.551265118866 13928.196724634277 12199.704380266941 14942.63572423886 1.0034950224475108 0.967613798136828 0.9330952412658632 0.8813377275280537 0.9522850358512661 0.9273694471686602 0.8462140843263614 0.9642576805741412 0.9321111068806266 0.81643590899278 1.0 13.867147026398433 -10.527194929609848 0.7776937444552919 1.0011853850102133 0.9319576044022283 0.0 0.06760134927163783 0.7279013936645797 0.7696551028575939 0.029798666456382492 0.007861229640423253 2.9703325224618225e-11 10.527194929609848 -0.06922778060798496 LVPTGPTHREPS(ph)PVRYDNLSR ddPTM_A549_MK2206_60min_R1 2 LVPTGPTHREPSPVRYDNLSR 21 2 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 LVPTGPTHREPS(1)PVRYDNLSR;LVPT(0.063)GPT(0.057)HREPS(0.879)PVRYDNLSR 136.71 1.4278e-18 204170000.0 5265.0 5453.4 5815.3 4497.6 6977.099999999999 5356.8 5173.0 4880.6 8527.4 8571.099999999999 7303.0 True False 6153.603283108615 5730.9547666453 6639.996984010752 5599.512201904937 5950.777832508478 5923.653020443944 6112.867139603413 5572.439996210639 6595.957515459618 6634.882557112518 5489.4635474536735 1.1209844513792258 1.0439917702529684 1.209589411899959 1.0200472511566836 1.0840363144899265 1.079095064433331 1.1135636636914932 1.015115584253302 1.2015668668606423 1.2086577312623117 1.0 12.422449454795444 -11.183197882257168 1.6051777503871243 1.0000949653456304 1.1110747630099138 0.0 0.08694211931373251 0.4064603505726932 1.8846647978420028 0.04698175219024437 0.009918719888591944 6.558463678914736e-12 11.183197882257168 0.11097979766428345 LVPTGPTHREPS(ph)PVRYDNLSR ddPTM_A549_PD325901_60min_R1 4 LVPTGPTHREPSPVRYDNLSR 21 2 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 LVPT(0.005)GPT(0.015)HREPS(0.979)PVRYDNLSR;LVPTGPT(0.005)HREPS(0.995)PVRYDNLSR;LVPTGPTHREPS(1)PVRYDNLSR;LVPTGPT(0.001)HREPS(0.999)PVRYDNLSR 194.82 4.9466e-56 455667000.0 12889.4 15483.599999999999 14135.1 16099.4 15399.7 16812.100000000002 15277.0 17185.5 18451.2 18790.199999999997 18991.8 True False 14197.92239932523 16788.45731169893 15094.392887261343 17093.823373609746 14318.078198080906 16675.187831633997 15858.374594895175 16842.72172073607 17675.7602297764 17603.783565244412 16655.928998939416 0.8524245270395484 1.0079568250301711 0.9062474322640601 1.0262906004641479 0.8596385226541626 1.0011562749034177 0.9521158859349709 1.0112147885481828 1.061229321456757 1.056907937489728 1.0 14.023748203377687 -8.200156476975566 1.9999197928115569 1.0292692748704597 0.9436092252410639 0.3759321536666086 0.055378611163997 0.26910763953849065 2.1064677482687033 0.008772012992525351 0.011513290252460564 6.307300505197924e-09 8.200156476975566 -0.08566004962939577 LVPVGYGIK ddPTM_A549_MK2206_60min_R1 2 LVPVGYGIK 9 0 P24534 P24534 EEF1B2 Elongation factor 1-beta 0 ; 150.02 6.4767e-05 5166000.0 3497.3 3549.2 3229.5 3072.9 4284.9 3272.1000000000004 3103.2 3152.7 4958.2 4520.8 4712.8 False True 4087.558739224266 3729.8391201411046 3687.491661627554 3825.760637947724 3654.5968861727083 3618.351450155807 3667.0112715285736 3599.6048797388185 3835.175616618414 3499.548140168039 3542.481693336938 1.153868698012629 1.0528887494765513 1.040934570971352 1.0799662409388329 1.0316487712686415 1.0214171203655258 1.0351532030287873 1.01612518887799 1.0826239762458068 0.987880374018685 1.0 11.790544682336007 -2.000000000000073 0.006689916956843531 2.1876963843163155e-12 2.206190569517729 0.37866422821227563 0.03486243758184908 24966.332152772437 12.574482853959465 1872.2121608957534 2294.940938844095 0.009999999999998323 2.000000000000073 2.2061905695155413 LVPVGYGIK ddPTM_A549_PD325901_60min_R1 2 LVPVGYGIK 9 0 P24534 P24534 EEF1B2 Elongation factor 1-beta 0 ; 135.87 0.00012467 9484800.0 6445.1 6300.6 6310.1 7117.0 7874.799999999999 7486.7 6855.200000000001 7314.4 7736.9 7559.299999999999 7784.1 False True 7099.401807368151 6831.5736739576205 6738.341331713807 7556.600926120261 7321.701214585185 7425.730797407471 7116.078387309375 7168.508553964208 7411.744998794501 7082.004507921789 6826.705047475452 1.0399455898557597 1.0007131736977517 0.9870561690966387 1.1069177404866388 1.072508796508322 1.0877474192551415 1.0423884345114536 1.05006859152574 1.0856987298045635 1.0373971716473598 1.0 12.736973705247287 -6.223468229297094 24.999739175459034 1.0513247191703237 1.0083857983586468 0.3252421795471401 0.030847161137035343 734.6119328208304 483658.77642692206 0.005473191551130997 0.01448060044951647 5.977667725661847e-07 6.223468229297094 -0.04293892081167683 LVPVGYGIR ddPTM_A549_PD325901_60min_R1 2 LVPVGYGIR 9 0 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PQZ1;H0YE72;E9PQC9;H0YE58 P29692;H0YE58 EEF1D Elongation factor 1-delta 0 ; 103.29 0.0018204999999999999 7514100.0 3583.8999999999996 3382.0 3504.6000000000004 3724.5 3794.6000000000004 4095.7999999999997 4178.6 4003.8999999999996 4028.5 3967.6 4080.5 False True 3947.734889672265 3667.0130091300334 3742.4432308718124 3954.553906046777 3528.080386659337 4062.4451627581598 4337.618909617659 3924.039073501211 3859.1961544861147 3717.0850588851467 3578.6243684207025 1.1031431307819703 1.02469905517028 1.045777048828236 1.1050486161507858 0.9858761421826255 1.1351974235147162 1.2120911453838648 1.0965216433802314 1.078402133663789 1.0386910377312244 1.0 11.805189403365485 -10.292450646235313 0.9216606946192274 1.0049123243872884 1.086264840905404 0.16600018613568734 0.057003621642286006 0.6085693547078442 1.0052699132327079 0.02825588402300242 0.011129726029044404 5.0997554853715773e-11 10.292450646235313 0.0813525165181157 LVPVLSAK ddPTM_A549_MK2206_60min_R1 2 LVPVLSAK 8 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 0 ; 83.265 0.0093689 6105100.0 2843.3399999999997 3151.86 3224.7599999999998 3034.8900000000003 3811.1 3066.42 3026.4 3011.7700000000004 4117.6 4582.7 3691.29 False True 3323.2262790112177 3312.276211317465 3682.079458352711 3778.438186241388 3250.492238533642 3390.9065290751428 3576.2577056438777 3438.697620658793 3184.970174456048 3547.464887176622 2774.640818578705 1.1977140452772272 1.193767564125349 1.327047246511293 1.3617756074737173 1.1715001872561976 1.2221064818083793 1.2889083450721368 1.2393307262091846 1.1478855760824322 1.2785312114718301 1.0 11.43808530917203 -9.533296889066676 0.6108944107203022 1.0090742429853425 1.2601481523444447 0.0 0.09761773490313665 0.2682139389746223 0.22026686207757523 0.027858312060473168 0.015540546389799974 2.928890335148016e-10 9.533296889066676 0.2510739093591021 LVPVLSAK ddPTM_A549_PD325901_60min_R1 2 LVPVLSAK 8 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 0 ; 124.08 0.0031171 13013600.0 6091.799999999999 6700.700000000001 6263.7 6451.3 8735.9 6622.3 7034.3 7906.0 7763.4 7705.5 7797.0 False True 6710.235051453861 7265.391505108696 6688.7923486879445 6849.7821490346605 8122.320521218917 6568.370184416568 7301.994135816656 7748.308627862987 7437.131295950726 7218.973414971144 6838.0184292552885 0.9813128058773974 1.062499550165727 0.9781769993586291 1.0017203404613597 1.1878178752003596 0.960566317913816 1.067852362692725 1.13312192823482 1.087614982745913 1.0557113131029312 1.0 12.73936259566963 LVPVS(ph)PLPPK ddPTM_A549_MK2206_60min_R1 2 LVPVSPLPPK 10 0 O95396 O95396 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase 1 LVPVS(1)PLPPK;LVPVS(1)PLPPK 96.015 0.0005452000000000001 11718100.0 3993.2 4666.3 4558.1 4876.5 6478.1 4418.799999999999 4729.2 4460.8 7203.9 5845.2 6629.9 True False 4667.154535633304 4903.794738621222 5204.507119636031 6071.242718914407 5525.180071487177 4886.394483037949 5588.434424243665 5093.132060627057 5572.22815226441 4524.765260332291 4983.5128540686155 0.9365190122511609 0.9840036300132524 1.0443450778675112 1.2182656886211807 1.1086918471528244 0.9805120657105604 1.1213845710623946 1.0219963727933292 1.118132593500819 0.9079469428152883 1.0 12.282947334290393 -5.6909134494982005 3.2137977870777967 1.0680383108071196 0.9475657841349309 0.18501919117914034 0.07981754321943438 0.2440107330534075 4.875320732117923 0.0096279981555311 0.04547567499082462 2.0374480800627123e-06 5.6909134494982005 -0.12047252667218877 LVPVS(ph)PLPPK ddPTM_A549_PD325901_60min_R1 2 LVPVSPLPPK 10 0 O95396 O95396 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase 1 LVPVS(1)PLPPK;LVPVS(1)PLPPK 127.42 1.5749000000000002e-06 17246600.0 6527.0 5729.1 6611.2 7037.5 7424.0 6622.2 7191.9 6857.0 8554.6 7391.5 7402.6 True False 7189.616235076557 6211.911363278197 7059.875788375193 7472.1903916778665 6902.5638514096145 6568.270998783409 7465.59169005869 6720.231755787564 8195.079911422843 6924.7994285587165 6492.1271289477045 1.1074361441597196 0.956837603438162 1.0874518702654417 1.1509618100915129 1.063220684732407 1.011728647379098 1.1499453941329045 1.0351355761076775 1.2623104490486412 1.0666456911605708 1.0 12.664475535704263 -7.775728712094057 24.87868744805597 1.120726510806324 1.063244638728347 0.03755439131176064 0.0797352075860747 522.7301495604202 910106.4737417558 0.016338230980696734 0.02262951842102975 1.6759894785389584e-08 7.775728712094057 -0.05748187207797706 LVQAFQFTDK ddPTM_A549_MK2206_60min_R1 2 LVQAFQFTDK 10 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 ; 188.04 8.6185e-14 26735000.0 9188.2 9281.7 7928.099999999999 8865.5 11913.0 8767.5 9662.1 9582.0 13311.8 11759.7 11964.8 False True 10738.943530077602 9754.09888465392 9052.42379394625 11037.547897987417 10160.613481055676 9695.27103060452 11417.578501751816 10940.27784364429 10296.698554576453 9103.175602533647 8993.609948319006 1.1940637398984393 1.0845588079430837 1.0065395148294414 1.2272655764941687 1.129759188962247 1.0780177355163885 1.2695212008706107 1.2164501136375316 1.1448904960016646 1.0121826113033865 1.0 13.134684600531552 -10.450987863801032 0.9156280364264694 1.0048673346433215 1.1474438932496405 0.36599518576623435 0.0724664739833097 0.47563445703812546 0.7503165956082176 0.041131723667807964 0.01377160567934259 3.540072335466657e-11 10.450987863801032 0.14257655860631901 LVQAFQFTDK ddPTM_A549_PD325901_60min_R1 2 LVQAFQFTDK 10 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 ; 212.03 7.1494e-26 51505000.0 30360.0 27907.0 28232.0 27845.0 35914.0 30347.0 30287.0 30270.0 31903.0 32350.0 33216.0 False True 33442.12485014926 30258.820829625023 30147.993292807423 29564.922409416693 33391.52453657394 30099.864093515782 31439.588358682347 29666.241103644377 30562.22785567097 30307.415479114476 29130.642573572386 1.1480050522637044 1.038728231044108 1.034923730798784 1.0149080074271444 1.1462680389641342 1.0332715461904258 1.0792617526125106 1.0183860870462875 1.0491436218230674 1.040396393679612 1.0 14.830249904834156 -14.999999941756103 0.10469854857472806 0.7946550214344966 1.1014347201596433 0.15913956820883035 0.04365306769911523 100.35072626777661 0.7503433334104599 4.438044071892896 0.2398332829390294 1.0000001341115376e-15 14.999999941756103 0.30677969872514665 LVQGSILK ddPTM_A549_PD325901_60min_R1 1 LVQGSILK 8 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 84.49799999999999 0.0087331 1833800.0 2724.5 2337.6 2892.4 2735.5 3079.1 3074.5 3104.6 2933.8 3301.7 2494.2 2937.7 False True 3001.0892343291084 2534.5977558079135 3088.69565741415 2904.4656222287454 2862.8346383183357 3049.4622913472253 3222.7472519023067 2875.283057478425 3162.941030971035 2336.715786337165 2576.381523614631 1.1648465907792327 0.9837819952426551 1.1988502592119 1.12734297913836 1.1111842761167665 1.1836221706282337 1.2508812155199873 1.1160160213555788 1.227667952894441 0.9069758360395249 1.0 11.331130535517623 -4.4397003703998905 16.33779776378046 1.124695273430532 1.1285927610395146 0.0 0.10452569824302646 0.0 0.0 0.012784189480751069 0.0 3.633286369752646e-05 4.4397003703998905 0.003897487608982564 LVQSPNS(ph)YFMDVK ddPTM_A549_MK2206_60min_R1 1 LVQSPNSYFMDVK 13 0 P42677;C9JLI6;H0YMV8;Q71UM5 P42677 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like 1 LVQS(0.006)PNS(0.55)Y(0.444)FMDVK 54.608000000000004 0.006925199999999999 2752600.0 1572.7 1646.3 1501.5 2191.1 2369.2 1542.7 1599.0 1620.8 3203.7 2882.7 2716.0 True False 1838.1333111766235 1730.0896380841593 1714.4352778862892 2727.919598362217 2020.6938184602623 1705.947490038619 1889.51760220875 1850.5533634918245 2478.0670652576364 2231.4960678779003 2041.542242213362 0.9003650638077366 0.8474424884828552 0.8397745794510546 1.3362053167240424 0.9897879047898138 0.8356170422362145 0.9255344137088279 0.906448725491727 1.213821107405062 1.0930442788480328 1.0 10.995443703805478 -8.74429823589881 24.999285700629205 1.1009710891131934 0.9505962683557395 0.19545215434907615 0.13963137973583584 321.4022066739159 468744.74788346636 0.025977589078870107 0.029419386785373577 1.8017800092056225e-09 8.74429823589881 -0.1503748207574539 LVQSPNS(ph)YFMDVK ddPTM_A549_PD325901_60min_R1 5 LVQSPNSYFMDVK 13 0 P42677;C9JLI6;H0YMV8;Q71UM5 P42677 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like 1 LVQS(0.059)PNS(0.543)Y(0.397)FMDVK;LVQS(0.017)PNS(0.658)Y(0.325)FMDVK;LVQS(0.041)PNS(0.53)Y(0.429)FMDVK;LVQS(0.012)PNS(0.56)Y(0.428)FMDVK;LVQS(0.085)PNS(0.492)Y(0.423)FMDVK 76.465 0.00035162 16759900.0 10389.0 10357.599999999999 10663.4 11060.1 13685.1 13607.4 12199.5 12900.8 11910.099999999999 12770.0 13064.400000000001 True False 11443.68363202242 11230.471302000364 11387.082448233305 11743.257257690417 12723.905787032014 13496.585845919093 12663.75864832255 12643.48342351819 11409.559915488422 11963.700020658172 11457.561622055007 0.9987887483837858 0.9801798735590032 0.9938486759969909 1.0249351166556648 1.110524752713473 1.177963190696623 1.1052751943263126 1.1035056009806106 0.9958104779926136 1.0441750535846026 1.0 13.48401242451056 -4.311136377328188 15.017907655780565 1.0280279984126452 1.0448331451211887 0.0 0.06561368179230302 0.0 0.0 0.009867302509229783 0.0 4.884989366222641e-05 4.311136377328188 0.016805146708543495 LVRDPLS(ph)PAVR ddPTM_A549_MK2206_60min_R1 2 LVRDPLSPAVR 11 1 Q6P444;E9PN39 Q6P444 MTFR2 Mitochondrial fission regulator 2 1 LVRDPLS(1)PAVR;LVRDPLS(1)PAVR 72.891 0.00048649 6358200.0 579.29 648.08 530.0 470.36 613.3 403.38 686.75 553.51 793.88 714.62 880.4000000000001 True False 677.0599897192765 681.0645038265096 605.1619695502726 585.5982211152626 523.0843824335972 446.0654038580267 811.5235855640141 631.9717375532821 614.0674475658559 553.1868456748554 661.7723821961129 1.0231010056243677 1.0291522011939744 0.914456368732136 0.8848937140167986 0.7904294535497611 0.6740465692716646 1.226288082423366 0.9549684371174022 0.9279133794131048 0.8359170925796073 1.0 9.37019127456494 -10.811993140498135 0.4086467512407537 1.0203301206889677 0.92670052420206 0.0 0.14124103129244459 8.293243629167101 1.674314261201222 0.33382565868848596 0.04109638828793274 1.541724803663394e-11 10.811993140498135 -0.09362959648690772 LVRDPLS(ph)PAVR ddPTM_A549_PD325901_60min_R1 2 LVRDPLSPAVR 11 1 Q6P444;E9PN39 Q6P444 MTFR2 Mitochondrial fission regulator 2 1 LVRDPLS(1)PAVR;LVRDPLS(1)PAVR 68.83 0.0010841 10140900.0 517.16 600.6700000000001 684.24 806.85 675.09 885.26 646.52 767.4 862.8499999999999 770.12 767.11 True False 569.6617024869299 651.2905689515482 730.6766410693741 856.6872920106971 627.6740073340669 878.050736067018 671.1236723893186 752.0936049863466 826.5874151417012 721.4944917704983 672.7603331109433 0.8467528099534792 0.9680870540328741 1.0860875784554913 1.273391503403966 0.9329830794743939 1.3051464137411037 0.9975672455091747 1.1179220414327262 1.2286506419298515 1.0724391083436817 1.0 9.393948834560417 -5.573535828935782 2.4891305956777128 1.1151761212322944 0.8514620236924586 0.3587005054211495 0.11149369556904709 0.2745001981437074 3.026865125391988 0.016020699314699634 0.11431541840600022 2.6697105091338633e-06 5.573535828935782 -0.26371409753983577 LVREDENDAS(ph)DDEDDDEKR ddPTM_A549_MK2206_60min_R1 2 LVREDENDASDDEDDDEKR 19 2 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 LVREDENDAS(1)DDEDDDEKR;LVREDENDAS(1)DDEDDDEKR 156.92 3.652e-27 31474000.0 4102.3 4169.9 4320.799999999999 4375.2 5252.4 3961.4 4282.1 4580.799999999999 5745.9 5870.6 6353.6 True False 4794.6679483943935 4382.130098917051 4933.554411382669 5447.124196410193 4479.778917812209 4380.592718635501 5060.102141599801 5230.142428111639 4444.462824316837 4544.427382691229 4775.825769560679 1.0039453237498335 0.9175649008904604 1.0330264648319654 1.1405617497874647 0.9380113793858726 0.9172429921032201 1.059524024902875 1.095128398830335 0.9306166176840401 0.9515479839435733 1.0 12.22153449019785 LVREDENDAS(ph)DDEDDDEKR ddPTM_A549_PD325901_60min_R1 3 LVREDENDASDDEDDDEKR 19 2 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 LVREDENDAS(1)DDEDDDEKR;LVREDENDAS(1)DDEDDDEKR;LVREDENDAS(1)DDEDDDEKR 144.76 2.3754e-21 56144000.0 10003.9 11223.4 10893.7 11497.3 11328.2 11338.3 10672.6 11650.400000000001 10914.2 12188.099999999999 12443.900000000001 True False 11019.488563518053 12169.235306525728 11633.01199113972 12207.462108737172 10532.546312168428 11245.964644001378 11078.751633270815 11418.023632438008 10455.514129152878 11418.541285965839 10913.379188381427 1.0097228707355457 1.115074909106183 1.065940419583737 1.1185776557396125 0.9651040370137198 1.0304750206035203 1.0151531841819852 1.046240897099391 0.9580455282158619 1.0462883300272583 1.0 13.413810262464871 -7.270286401866621 0.7443773184892712 0.9837813066528339 1.0775532886631538 0.14132651664088236 0.046479723202970634 0.48133000395664904 0.5183138492237328 0.007940736084147469 0.021209461402258687 5.366777596247777e-08 7.270286401866621 0.09377198201031989 LVREDENDAS(ph)DDEDDDEKRR ddPTM_A549_MK2206_60min_R1 4 LVREDENDASDDEDDDEKRR 20 3 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 LVREDENDAS(1)DDEDDDEKRR;LVREDENDAS(1)DDEDDDEKRR;LVREDENDAS(1)DDEDDDEKRR;LVREDENDAS(1)DDEDDDEKRR 263.18 9.804599999999998e-112 544050000.0 26703.9 28264.1 27118.199999999997 23337.7 35578.4 26085.4 23925.6 25130.9 37943.9 39431.5 38437.2 True False 31210.86547232747 29702.621964268048 30963.96853331734 29055.437547669175 30344.86449042151 28845.739713912877 28272.57182201728 28693.28203515345 29349.667233957378 30523.89676363389 28892.182427247208 1.0802529560000838 1.0280504783278865 1.071707497738776 1.0056504945873528 1.0502794161303761 0.9983925508759584 0.978554385540443 0.9931157712784555 1.0158342073279565 1.0564759806738542 1.0 14.818391564346637 -6.503358061459703 0.9833098234066489 1.0041165245459949 1.0615951649218607 0.3740492888346554 0.02595423230992654 0.36036234752765794 0.621290571841467 0.0031558637362802495 0.01369676363078382 3.1379205152398446e-07 6.503358061459703 0.05747864037586581 LVREDENDAS(ph)DDEDDDEKRR ddPTM_A549_PD325901_60min_R1 4 LVREDENDASDDEDDDEKRR 20 3 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 LVREDENDAS(1)DDEDDDEKRR;LVREDENDAS(1)DDEDDDEKRR;LVREDENDAS(1)DDEDDDEKRR;LVREDENDAS(1)DDEDDDEKRR 231.51 3.0567999999999996e-76 697260000.0 28392.5 29122.0 35530.4 32944.0 36589.9 35701.3 34240.2 36082.9 37172.0 36455.0 37500.299999999996 True False 31274.885698546215 31576.21314366788 37941.70660565195 34978.8760587475 34019.95165230232 35410.56044952828 35543.229547956355 35363.198253012546 35609.79010911207 34153.22507855079 32888.00083398771 0.9509512559433397 0.9601134864675576 1.153664121974892 1.0635756255089546 1.0344183528828184 1.0767015188388607 1.0807354854851692 1.0752614131676521 1.0827593409785967 1.0384706948576683 1.0 15.005273693148403 -5.568501160999756 24.952641568901562 1.0546324299594076 0.9532415685399429 0.5443328050922953 0.03805750142619444 72.65924735802858 39739.93293883146 0.00609729964029268 0.023614761414602985 2.7008398881577623e-06 5.568501160999756 -0.10139086141946474 LVRLS(ph)SDSFAR ddPTM_A549_MK2206_60min_R1 3 LVRLSSDSFAR 11 1 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LVRLS(0.992)S(0.008)DSFAR;LVRLS(0.965)S(0.033)DS(0.002)FAR;LVRLS(0.963)S(0.035)DS(0.002)FAR 176.99 1.4165999999999998e-15 144492000.0 5782.95 6566.92 6492.43 4970.889999999999 7877.2699999999995 6230.52 6378.62 6513.65 9430.91 8384.289999999999 8697.16 True False 6758.9705804469095 6901.148178416833 7413.15419993825 6188.758273151729 6718.534017956466 6889.829490915544 7537.53268780536 7436.979834716517 7294.823943068604 6490.273065857706 6537.415142595128 1.0338903730326405 1.055638662665274 1.13395799994973 0.9466674730243619 1.0277049676991203 1.053907292199363 1.152983637017921 1.1376025038183966 1.1158575345075625 0.9927888812765976 1.0 12.674504599573982 -7.52796498878235 24.98822051650493 1.0717758108031614 1.040572733935628 0.0816433676477929 0.061966256556680165 399.1380994950172 1960912.8444736474 0.010579324486657389 0.01572022275667248 2.9650704129188208e-08 7.52796498878235 -0.03120307686753332 LVRLS(ph)SDSFAR ddPTM_A549_PD325901_60min_R1 5 LVRLSSDSFAR 11 1 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LVRLS(0.742)S(0.182)DS(0.075)FAR;LVRLS(0.407)S(0.407)DS(0.185)FAR;LVRLS(0.972)S(0.028)DSFAR;LVRLS(0.895)S(0.081)DS(0.024)FAR;LVRLS(0.954)S(0.046)DSFAR 150.22 2.7319999999999997e-12 253128000.0 11750.599999999999 12379.3 12472.0 13180.1 14547.5 13262.0 12254.3 13414.6 13409.1 13154.7 14182.199999999999 True False 12943.512261665477 13422.547056157126 13318.424920228625 13994.20484282109 13525.733786150508 13153.99866900209 12720.644092310255 13147.03527944988 12845.562158401328 12324.109997004856 12437.879308373018 1.040652666001677 1.079166851789697 1.0707954780734072 1.1251278852175686 1.0874630192821666 1.0575756801360012 1.0227341636726515 1.0570158266931782 1.032777520984133 0.9908529976415212 1.0 13.602452902630015 -8.604352200440356 0.5210782963620966 1.005238459439614 1.0816429314838505 0.6158743753450294 0.023298908306731352 0.3921129223195643 0.24422655859009243 0.008467266528874303 0.009227666000177225 2.486839744178348e-09 8.604352200440356 0.0764044720442365 LVRLSS(ph)DSFAR ddPTM_A549_MK2206_60min_R1 1 LVRLSSDSFAR 11 1 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LVRLS(0.427)S(0.556)DS(0.018)FAR 48.111999999999995 0.008614700000000001 82848000.0 331.11 348.53 341.27 242.5 396.07 363.78 384.86 193.21 408.76 463.61 697.12 True False 386.99327313771965 366.26868830800714 389.667217638531 301.91251088623875 337.8086276707562 402.2749581423792 454.78408029146925 220.59810918080913 316.1765126555894 358.8801790088713 524.0058644667812 0.7385285153850653 0.6989782236134237 0.7436314057955233 0.5761624656499968 0.6446657386449369 0.7676917099997094 0.8678988368846773 0.4209840464386515 0.6033835384215115 0.684878172831255 1.0 9.033439147701188 -10.769796480669063 1.0309686850120163 0.9991275273316058 0.6712921716904554 0.026790117146508474 0.1431985079543247 0.3282456742679613 0.6223861891488158 0.07731500990875086 0.019831642550747174 1.6990396708837227e-11 10.769796480669063 -0.3278353556411504 LVRS(ph)SPHGK ddPTM_A549_MK2206_60min_R1 1 LVRSSPHGK 9 1 P46109 P46109 CRKL Crk-like protein 1 LVRS(0.5)S(0.5)PHGK 50.284 0.011999 3495400.0 527.99 756.04 512.22 479.35 868.55 617.53 582.82 447.66 805.76 1164.3 1067.0 True False 617.1018038838592 794.5192066920663 584.8604981944161 596.7907715188395 740.7874455612274 682.8766147167619 688.7108498557246 511.11717590125295 623.2566465343173 901.2838213585313 802.0344522981063 0.7694205680512215 0.9906297720945699 0.7292211656476705 0.7440961791713901 0.9236354416429555 0.8514305249108489 0.8587048198270407 0.6372758357658145 0.7770946057846658 1.1237470145777917 1.0 9.64752040038517 -10.726402474953565 1.0403075471631358 0.997377711416982 0.810729950291821 0.4550889741906371 0.1008464130270856 0.4446830430874813 0.8736274035727345 0.05866738536267227 0.016067757425239994 1.8775759989753116e-11 10.726402474953565 -0.1866477611251609 LVRS(ph)SPHGK ddPTM_A549_PD325901_60min_R1 3 LVRSSPHGK 9 1 P46109 P46109 CRKL Crk-like protein 1 LVRS(0.576)S(0.424)PHGK;LVRS(0.596)S(0.404)PHGK;LVRS(0.5)S(0.5)PHGK 47.559 0.014403999999999998 18095000.0 4979.719999999999 5789.389999999999 5895.07 6765.5 6780.9 9553.800000000001 6801.400000000001 8423.599999999999 7389.299999999999 6872.1 7798.1 True False 5485.257508523892 6277.2822131659705 6295.144900135677 7183.3895694346875 6304.6329768350515 9475.997020352299 7060.230998868891 8255.58468981364 7078.753417982932 6438.19443320008 6838.983136228763 0.8020574695478253 0.917867771878652 0.9204796641167072 1.050359304350594 0.9218670160826906 1.3855856684532886 1.0323509881853767 1.2071362840596267 1.0350593468324276 0.9413964481202551 1.0 12.739566116589357 -5.8806936378318015 1.2236549618264274 1.055093124286453 0.8129215572855853 0.3288358266434306 0.12449346243145225 0.625631532328511 1.4340064048947985 0.017818825246966777 0.14391434870895875 1.3161529519398492e-06 5.8806936378318015 -0.24217156700086762 LVS(ph)PEPPPK ddPTM_A549_MK2206_60min_R1 2 LVSPEPPPK 9 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 LVS(1)PEPPPK;LVS(1)PEPPPK 101.97 0.00071147 27314000.0 6287.8 6246.5 6162.4 6539.5 8181.1 5821.9 5040.700000000001 6378.7 8439.5 8043.5 8528.8 True False 7349.026918049451 6564.420169041308 7036.320983314336 8141.67779356931 6977.671027437642 6437.969593735547 5956.529942122356 7282.900258949472 6527.966725112161 6226.467763546635 6410.863577094741 1.1463396201888707 1.0239525596044825 1.0975621144792849 1.2699814456602327 1.0884135878929069 1.0042281381150666 0.9291306655478264 1.136024838365055 1.018266360937053 0.9712369774632343 1.0 12.64630299321828 -7.125436378386779 4.666782895358374 1.0127754921279704 1.1295490914747652 0.39806895296155265 0.07181335976654124 0.1859186730268902 6.297747138141545 0.01026753658472967 0.01813679708889094 7.491410952817666e-08 7.125436378386779 0.11677359934679488 LVS(ph)PEPPPK ddPTM_A549_PD325901_60min_R1 2 LVSPEPPPK 9 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 LVS(1)PEPPPK;LVS(1)PEPPPK 101.66 0.00072428 39959000.0 10234.5 10421.4 9515.099999999999 9159.0 11474.8 8736.5 11053.0 10524.2 10257.599999999999 11883.8 12391.4 True False 11273.498905759312 11299.647951906481 10160.851904944466 9724.730628401778 10668.849633910968 8665.352840577343 11473.627963433677 10314.286574924821 9826.508743764876 11133.454839898008 10867.336355556496 1.0373746184818458 1.03978082413258 0.9349900999198573 0.8948587133248618 0.981735476371444 0.7973759674924138 1.0557902680142206 0.9491089847100482 0.9042242203850218 1.0244879219373242 1.0 13.407710750683767 -5.757462678605188 24.83832327231571 0.9466080635385313 1.038577767877575 0.21007013563556132 0.06671472031735515 95.64104787471052 597342.1499072075 0.008517448963764872 0.03071290143718494 1.7479834701249943e-06 5.757462678605188 0.09196970433904361 LVS(ph)PEQPPK ddPTM_A549_PD325901_60min_R1 1 LVSPEQPPK 9 0 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3 O43491 EPB41L2 Band 4.1-like protein 2 1 LVS(1)PEQPPK 51.286 0.052996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LVS(ph)PETEASEESLQFNLEKPATGER ddPTM_A549_MK2206_60min_R1 2 LVSPETEASEESLQFNLEKPATGER 25 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVS(0.966)PET(0.017)EAS(0.016)EESLQFNLEKPATGER;LVS(0.965)PET(0.035)EASEESLQFNLEKPATGER 85.069 2.728e-07 9741800.0 1661.22 2191.6000000000004 2121.9 1430.02 2479.8 1935.91 1987.94 2501.8 3088.6 2806.6000000000004 2623.0 True False 1941.593323070409 2303.1430789195456 2422.817326771174 1780.3749641960383 2115.0247049711975 2140.766711246945 2349.1229656878427 2856.43781144117 2389.0370314807055 2172.5871107316448 1971.6367088827863 0.9847622101591925 1.1681376536271761 1.2288355739450834 0.9029934146462889 1.072725363370649 1.0857815243559727 1.1914583224710582 1.4487647742467475 1.2117024504146285 1.1019206027882924 1.0 10.94517803182573 -7.599620032167856 10.071720591292571 1.1404406631627813 1.0765404480315235 0.11266881695036224 0.13283380185928265 1.1831393386249478 146.70548723175474 0.023700326051870526 0.03516117228533071 2.5140850633723914e-08 7.599620032167856 -0.06390021513125776 LVS(ph)PETEASEESLQFNLEKPATGER ddPTM_A549_PD325901_60min_R1 2 LVSPETEASEESLQFNLEKPATGER 25 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVS(0.997)PET(0.003)EASEESLQFNLEKPATGER;LVS(0.997)PET(0.003)EASEESLQFNLEKPATGER 122.09 1.0632e-17 26999000.0 3430.6 3621.9 4536.7 3604.4 4210.4 3658.2 3671.1 3357.8999999999996 4050.8999999999996 4509.0 4634.299999999999 True False 3778.8719865257576 3927.130224059157 4844.587743393297 3827.0356018136667 3914.6760290914617 3628.408832072345 3810.805719402999 3290.9240502784114 3880.6547603842146 4224.300970489244 4064.3104792481436 0.9297695158428966 0.9662475945453942 1.191982691314837 0.9416198937935543 0.9631833121704908 0.892748930131825 0.937626625441263 0.8097127586786134 0.9548125764993467 1.0393647316212655 1.0 11.988794900788463 LVS(ph)PGSANETSSILVESVTR ddPTM_A549_MK2206_60min_R1 2 LVSPGSANETSSILVESVTR 20 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 LVS(0.99)PGS(0.01)ANETSSILVESVTR;LVS(0.999)PGS(0.001)ANETSSILVESVTR 406.43 0.0 121881000.0 33221.0 37193.0 34582.0 34838.0 52715.0 40619.0 40161.0 39381.0 58518.0 50328.0 49687.0 True False 38827.892624530185 39085.96483585261 39486.24760563685 43373.31156393726 44960.69333113824 44917.27561929 47457.73384759574 44963.37734925444 45263.76643404389 38958.86984568595 37348.346608562344 1.0396147661227029 1.046524635896249 1.0572421858317116 1.1613181171986247 1.203820179842465 1.2026576729100085 1.27067830726182 1.2038920442852028 1.2119349461019218 1.0431216742739124 1.0 15.18875675663556 -6.195151129740503 5.788751105925068 1.1396640458078262 1.0461320839629233 0.27707269225133313 0.07628249436864498 0.3570224243484207 23.258884620022148 0.01427906933376877 0.038358700980119446 6.380414161035718e-07 6.195151129740503 -0.09353196184490287 LVS(ph)PGSANETSSILVESVTR ddPTM_A549_PD325901_60min_R1 2 LVSPGSANETSSILVESVTR 20 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 LVS(0.919)PGS(0.081)ANETSSILVESVTR;LVS(0.997)PGS(0.003)ANETSSILVESVTR 372.39 8.708299999999994e-284 239310000.0 12691.5 11798.900000000001 12900.3 12280.3 14311.6 13895.8 12647.5 14848.4 13663.0 14683.7 12638.5 True False 13979.931737011506 12793.23471124316 13775.791933805753 13038.826240415163 13306.402588339684 13782.63721193781 13128.80753347756 14552.237013655538 13088.791624362366 13756.56867606409 11084.044622052455 1.2612662808301482 1.1542027434453084 1.2428488339353925 1.1763599556856292 1.2005006333036317 1.2434664133809352 1.1844780476033911 1.312899533506287 1.180867821329529 1.2411145159677963 1.0 13.436196803482519 -10.216253056545252 0.7400116340698777 1.0034145039983549 1.2179454422542035 0.0 0.08185571937080123 0.22463784980496057 0.23479940646711894 0.025433275421702886 0.00894402347220554 6.077807538217285e-11 10.216253056545252 0.21453093825584868 LVS(ph)PSDQR ddPTM_A549_MK2206_60min_R1 1 LVSPSDQR 8 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 LVS(0.5)PS(0.5)DQR 70.439 0.0065964 5807100.0 1881.6 2040.5 2000.7 2260.3 2721.3 2118.1 2162.7 2112.7 3034.2 3658.5 3196.9 True False 2199.168079296709 2144.3527343198257 2284.429344300434 2814.0736014687222 2321.000374884312 2342.235936119011 2555.6345955577613 2412.1816948723936 2346.958544621756 2832.0423090614013 2403.0215000485623 0.9151678747994 0.8923568658359864 0.9506487329615104 1.171056356096628 0.9658675025743245 0.9747045276422526 1.063508834817381 1.0038119487585302 0.9766698069802233 1.1785339036725926 1.0 11.230633841109341 -6.004065712714945 24.909900753919306 1.0042500319819863 0.9081974374407388 0.2596219134187102 0.07695064120817609 141.13063204804678 864706.491224732 0.007544771002216765 0.022704788167807542 9.906820343269504e-07 6.004065712714945 -0.09605259454124748 LVS(ph)PSDQR ddPTM_A549_PD325901_60min_R1 1 LVSPSDQR 8 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 LVS(0.5)PS(0.5)DQR 81.163 0.0037735 9126000.0 3986.7 4758.7 4503.8 4417.2 4925.2 5593.1 3418.2 4407.8 5173.7 4304.9 4742.0 True False 4391.426849146578 5159.732349659105 4809.454951549526 4690.040411810938 4579.270943017594 5547.551647986394 3548.281471510813 4319.882971147796 4956.267381026395 4033.0878793211705 4158.764062014699 1.0559451759374794 1.2406888856203806 1.156462564317631 1.1277486151832483 1.1011134257034965 1.3339423841464333 0.8532057646453403 1.0387420172749695 1.191764501933622 0.9697804009028957 1.0 12.021939123958283 -7.740199014243044 24.999607710787966 1.0719623377292395 1.1669870235314752 0.27619430101768205 0.10894391376991276 375.81297631799106 442325.5793687058 0.017373082413601183 0.025753946121020544 1.8188671767641104e-08 7.740199014243044 0.09502468580223566 LVS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 LVSPSR 6 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4;C9J8P4;C9JEF2;C9JZ19 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LVS(0.988)PS(0.012)R;LVS(0.988)PS(0.012)R 81.89 0.042003 74489000.0 7746.5 10603.0 9186.5 9644.7 12209.2 10024.5 9102.3 8178.9 13651.8 13690.6 14233.599999999999 True False 9053.91981625848 11142.647410925318 10489.283836365237 12007.65193296704 10413.242853429441 11085.285936275444 10756.070087920389 9338.284121830755 10559.689097444892 10597.883951465357 10699.004292624482 0.8462394787989695 1.041465832349153 0.9803981332726618 1.1223149000178168 0.9732908379715265 1.0361044479547739 1.005333748238165 0.8728180554398169 0.9869786765787515 0.9905486213115333 1.0 13.38518891739689 -5.675739985584312 0.0031488746422630776 1.1488822649487784 0.8307338449117379 0.0 0.07223183348916563 1355486.5757634426 708.4269865232228 35029.90765791098 36558.42450038871 2.1098909748116045e-06 5.675739985584312 -0.3181484200370406 LVS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 LVSPSR 6 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4;C9J8P4;C9JEF2;C9JZ19 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 LVS(0.973)PS(0.027)R;LVS(0.989)PS(0.011)R 87.435 0.038849 115130000.0 11831.9 12555.6 12500.8 12373.900000000001 13699.2 13286.7 12819.5 13660.7 12678.2 13128.3 13869.4 True False 13033.06577781558 13613.704475882034 13349.179461417089 13138.207699834133 12737.015451674373 13178.497520391353 13307.353087599568 13388.226621888172 12145.379343628118 12299.37689751031 12163.55172537044 1.071485210247557 1.1192211603364912 1.0974738105132316 1.0801292251202237 1.0471460753611805 1.0834415652546585 1.0940351459881092 1.1006839880462986 0.9985059970843533 1.011166571673023 1.0 13.570276933034906 -8.766704804978414 24.999929855122282 0.9992944911926966 1.086743186442378 0.8161314961602525 0.017619549717527057 34.568951759635695 164130.63232577333 0.0030903459317854804 0.0033375011039638164 1.711178027542126e-09 8.766704804978414 0.08744869524968135 LVS(ph)SKEDLAGPSAGSGSAR ddPTM_A549_MK2206_60min_R1 2 LVSSKEDLAGPSAGSGSAR 19 1 Q5JS13-2;Q5JS13-7;Q5JS13 Q5JS13-2 RALGPS1 Ras-specific guanine nucleotide-releasing factor RalGPS1 1 LVS(0.514)S(0.484)KEDLAGPS(0.001)AGS(0.001)GS(0.001)AR;LVS(0.525)S(0.473)KEDLAGPSAGSGSAR 51.398 0.004067800000000001 8839800.0 2876.5 3712.6 3202.2 3155.8 4991.4 3792.1000000000004 3735.3999999999996 3259.3 5299.1 5206.799999999999 5802.4 True False 3361.982876327053 3901.555482203275 3656.3201111205326 3928.9711416692467 4257.171672067598 4193.377505007745 4414.073828199227 3721.3157561876246 4098.862310923851 4030.5802637203506 4361.503941906778 0.7708310988840352 0.8945436102248664 0.8383163605538436 0.9008294372769877 0.9760788316991482 0.9614521873329934 1.0120531557445909 0.8532184782482912 0.9397818655030025 0.9241262457642643 1.0 12.090609978242867 -3.0624837537913194 0.33602971069720633 0.9734435526101487 4.130655896454701e-13 0.5230613315117405 0.048534042883558774 13.311308472561459 0.31935267425123615 0.013473341379140266 7.2422386487203765 0.000865996718200061 3.0624837537913194 -0.9734435526097356 LVS(ph)SKEDLAGPSAGSGSAR ddPTM_A549_PD325901_60min_R1 1 LVSSKEDLAGPSAGSGSAR 19 1 Q5JS13-2;Q5JS13-7;Q5JS13 Q5JS13-2 RALGPS1 Ras-specific guanine nucleotide-releasing factor RalGPS1 1 LVS(0.52)S(0.48)KEDLAGPSAGSGSAR 42.45399999999999 0.020346 8022500.0 3235.4 4246.4 3600.1 3596.6 3989.4 4095.4 3778.6 3834.1 4417.6 3898.5 4434.9 True False 3563.8554262244033 4604.259030742096 3844.4244351599646 3818.7538135287546 3709.1983066828525 4062.048420225541 3922.3966907292584 3757.6258677067385 4231.9436346178145 3652.3480446778262 3889.4354151474026 0.9162911954637354 1.18378595844806 0.9884273743659188 0.9818272849207423 0.9536598273974117 1.0443799643531546 1.008474565602372 0.9661108789909888 1.08806116644501 0.9390432427425739 1.0 11.925345035533788 -8.758231946335954 24.99972060865275 1.0415844376037096 1.0096475431564242 0.0 0.07441022339453472 231.67446996896282 1805737.4816691692 0.011610275128702737 0.012897714404726436 1.7448899998444273e-09 8.758231946335954 -0.03193689444728531 LVSIDSK ddPTM_A549_MK2206_60min_R1 2 LVSIDSK 7 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-4;O75369-5;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315-2;Q14315 O75369-8;Q60FE5;Q14315-2 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 ; 98.29899999999999 0.031943 7449500.0 5803.7 7365.799999999999 5959.1 5310.0 7776.2 6237.4 5895.0 5345.299999999999 10051.6 8457.3 9110.8 False True 6783.222673158115 7740.687758124468 6804.189986315143 6610.95023837496 6632.331281069849 6897.43752794897 6966.045193884043 6103.012644294698 7774.928649106865 6546.7900561500555 6848.336914711886 0.990491962886071 1.1303018316017128 0.9935536278447539 0.9653365949582647 0.9684586730571032 1.0071697134426323 1.0171878633656724 0.8911671140454479 1.1353017157208543 0.9559678704016396 1.0 12.741537963800019 -8.783613812508055 24.998213445683653 1.0638924555980531 0.9991002917398405 0.0 0.06893260229701759 331.12688651312266 373292.16374294035 0.012235955711637898 0.01303120802288145 1.6458345974813476e-09 8.783613812508055 -0.06479216385821263 LVSIDSK ddPTM_A549_PD325901_60min_R1 2 LVSIDSK 7 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-4;O75369-5;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315-2;Q14315 O75369-8;Q60FE5;Q14315-2 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 ; 111.01 0.022803999999999998 15088500.0 9201.3 12151.9 10335.3 12712.400000000001 12495.9 11615.599999999999 11334.6 10590.1 13194.1 11159.599999999999 14440.6 False True 10135.409202360954 13175.983260096751 11036.715609207733 13497.616076044858 11618.23109251473 11521.006404739908 11765.944405531114 10378.872147727268 12639.597860718692 10454.980951490743 12664.497746505569 0.8003009203548992 1.0403873508313675 0.8714688754437988 1.0657837638898207 0.9173858549361321 0.9097089071628461 0.9290494294396802 0.8195249709441531 0.9980338828838476 0.8255345897452204 1.0 13.628502242782753 -8.92835339950026 24.999999999999897 0.9991366542061245 0.9253802451487635 0.0 0.09202657028924004 53.7727404285939 18762.305599271556 0.01198853791534461 0.012762733883945136 1.1793605611579718e-09 8.92835339950026 -0.07375640905736103 LVSIGAEEIVDGNAK ddPTM_A549_MK2206_60min_R1 2 LVSIGAEEIVDGNAK 15 0 O43707 O43707 ACTN4 Alpha-actinin-4 0 ; 211.67 5.4945e-45 5629800.0 2437.8999999999996 2393.6000000000004 3067.3999999999996 2420.1 2774.6 2579.8 3248.2 2821.6 3866.3 3289.9 3384.7 False True 2849.357919067521 2515.4240161077837 3502.403444148122 3013.0246086424177 2366.460015490395 2852.792723667356 3838.3558946181734 3221.570440787593 2990.5892232124106 2546.709305065217 2544.1855770322395 1.1199489317093216 0.9886951796346531 1.3766304925891577 1.184278629610452 0.9301444190446363 1.121298992267342 1.5086776409980152 1.2662482131297648 1.1754603320646504 1.0009919590991163 1.0 11.312988191644225 -10.362222303547195 0.9745658154444237 1.0108334111668416 1.1851379861217692 0.1735523989101878 0.15410458644580485 0.7368477588255763 1.355904868640862 0.0762869263299533 0.029440324164283698 4.342878671058955e-11 10.362222303547195 0.17430457495492768 LVSIGAEEIVDGNAK ddPTM_A549_PD325901_60min_R1 2 LVSIGAEEIVDGNAK 15 0 O43707 O43707 ACTN4 Alpha-actinin-4 0 ; 232.42 2.9056e-54 6854400.0 4490.6 3855.3 4447.9 5468.6 5391.4 5903.6 5396.3 5757.5 5000.3 5334.0 5104.0 False True 4946.482406195006 4180.199661176527 4749.761241395516 5806.383001908286 5012.726663320281 5855.523038932344 5601.659149468667 5642.662145828629 4790.15478001165 4997.210329693862 4476.240356921766 1.1050529041734964 0.933863985814019 1.0611050485818518 1.2971562156910708 1.119851988191145 1.3081341867350231 1.2514205455492637 1.2605806873402552 1.0701290364366756 1.1163856118598507 1.0 12.128071790241144 -8.959749656439108 5.508904306012788 1.030027074047508 1.166505297553338 0.14376700277632315 0.10994060274952702 0.21308992925768835 14.396866238805101 0.020635761330574574 0.021477883714041288 1.097110429334385e-09 8.959749656439108 0.13647822350583017 LVSLIGSK ddPTM_A549_MK2206_60min_R1 2 LVSLIGSK 8 0 P25786;P25786-2;F5GX11 P25786 PSMA1 Proteasome subunit alpha type-1 0 ; 103.56 0.0010720999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LVSLIGSK ddPTM_A549_PD325901_60min_R1 2 LVSLIGSK 8 0 P25786;P25786-2;F5GX11 P25786 PSMA1 Proteasome subunit alpha type-1 0 ; 124.98 0.0030648000000000003 2925000.0 4319.8 3912.8 3729.5 4331.0 4905.1 4879.4 4671.4 4570.1 4885.799999999999 4782.9 4502.7 False True 4758.34291593132 4242.545387972796 3982.6062973053754 4598.516033585339 4560.582697676359 4839.66378415991 4849.172683288163 4478.945770325905 4680.466816827173 4480.906877745181 3948.8964449670116 1.2049804248465346 1.0743622799681285 1.008536524775505 1.1645066153725776 1.1549005554422578 1.225573739804752 1.227981728786173 1.1342272031555696 1.1852594470519908 1.1347238247931857 1.0 11.947233820023927 -10.793428393961358 0.9878344511628938 0.9980293148802302 1.152623488870813 0.07426422140566302 0.07301794652413256 0.4438257184681288 0.7527674137265408 0.049036598502294346 0.011670301504516218 1.6090576558314578e-11 10.793428393961358 0.15459417399058273 LVSPETEAS(ph)EESLQFNLEKPATGER ddPTM_A549_MK2206_60min_R1 3 LVSPETEASEESLQFNLEKPATGER 25 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVSPET(0.019)EAS(0.513)EES(0.468)LQFNLEKPATGER;LVS(0.005)PET(0.068)EAS(0.925)EES(0.002)LQFNLEKPATGER;LVSPET(0.007)EAS(0.992)EES(0.001)LQFNLEKPATGER 130.46 3.9448e-24 13232600.0 3238.2 2786.72 3549.1 2932.26 4216.62 3206.7400000000002 3171.7200000000003 3257.29 4498.799999999999 4194.5 4811.1 True False 3784.728993611075 2928.552144956502 4052.4157474167373 3650.6638316341555 3596.3607837227364 3546.0750983382654 3747.9804685913314 3719.020832532261 3479.82898310736 3246.9595367932325 3616.3710903949564 1.046554377028197 0.809804102442558 1.1205751971029496 1.0094826389167528 0.9944667441000822 0.9805617315536571 1.036392664056498 1.028384736956321 0.9622433362410592 0.8978502082977942 1.0 11.820327010756818 -3.3908042444433457 18.026985441114807 0.9908634477396384 0.9673182833042036 0.0 0.07758262117500131 0.0 0.0 0.008454172938145585 0.0 0.0004066265722814553 3.3908042444433457 -0.023545164435434862 LVSPETEAS(ph)EESLQFNLEKPATGER ddPTM_A549_PD325901_60min_R1 1 LVSPETEASEESLQFNLEKPATGER 25 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVS(0.01)PET(0.068)EAS(0.54)EES(0.382)LQFNLEKPATGER 86.57 4.2453e-08 5670400.0 2233.8 2688.2 2415.8 2394.1 3197.5 2508.7 2727.5 2767.6 2925.3 2548.8 3398.2 True False 2460.573731563355 2914.744048238719 2579.750715385527 2541.9781196044023 2972.918630776162 2488.269978956834 2831.29650504527 2712.398046859803 2802.359814004776 2387.86833301907 2980.242942964646 0.8256285741308252 0.9780222968464543 0.8656175904972625 0.8529432560540611 0.9975423774743686 0.8349218592500337 0.9500220482793228 0.9101264892725827 0.9403125408350376 0.8012327782391119 1.0 11.541214225525438 -9.986852036381947 0.264725087292067 1.0334482684746913 0.8836405006670428 0.0 0.07955739887195493 2.4404192711418515 0.33459524365395205 0.12297501460575544 0.03870336433606639 1.030737231586447e-10 9.986852036381947 -0.14980776780764848 LVSPGSANETSSILVESVTR ddPTM_A549_MK2206_60min_R1 2 LVSPGSANETSSILVESVTR 20 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 0 ; 87.18 1.4347e-05 2207000.0 1045.04 1122.19 1077.69 1077.48 1891.48 1281.12 702.97 1367.3400000000001 1882.63 1281.79 1616.34 False True 1221.417203225038 1179.3046777389684 1230.5226471030812 1341.4626483699149 1613.245797628405 1416.6872680613697 830.6905496089338 1561.1646323031296 1456.2173109423425 992.2327487581833 1214.9581692853985 1.0053162603478263 0.9706545521913726 1.0128107108632698 1.1041224976156359 1.3278200339829536 1.1660378965101508 0.6837194650886793 1.2849534014997068 1.1985740313996531 0.8166805852598074 1.0 10.246690927708451 -6.193913064145311 4.500657771674235 1.1024425754103213 0.990216784931506 0.016080389717666566 0.1823123861093278 0.47582681856040104 18.966307793452234 0.023014330114391947 0.06306782323933251 6.398629086309462e-07 6.193913064145311 -0.11222579047881531 LVSPGSANETSSILVESVTR ddPTM_A549_PD325901_60min_R1 2 LVSPGSANETSSILVESVTR 20 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 0 ; 188.47 1.8065e-43 3538900.0 2307.37 2331.1000000000004 2352.6 3150.8 3185.1 3038.4 3090.7 3140.7 3474.0 3172.8999999999996 2970.5 False True 2541.6125038039822 2527.5499779961633 2512.261583333054 3345.4177600140133 2961.389563998484 3013.656277778311 3208.3182797959353 3078.056274668515 3327.999861160422 2972.562552509499 2605.1473315509597 0.9756118101354551 0.970213832970207 0.9643452993644676 1.2841568380788422 1.1367455222716472 1.1568083851841684 1.2315304554717377 1.1815286749390912 1.2774708826848253 1.141034334798946 1.0 11.347149249675436 -6.232168140972031 23.977053008331836 1.154882116978377 0.970072573071459 0.5860643841299136 0.07561947757040981 357.65919803749466 292969.477829903 0.01495141251953688 0.039549253364875865 5.859112798325613e-07 6.232168140972031 -0.18480954390691795 LVSPS(ph)DQR ddPTM_A549_MK2206_60min_R1 1 LVSPSDQR 8 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 LVS(0.296)PS(0.704)DQR 64.485 0.009399 6944700.0 2127.1 2933.3 2757.2 2408.2 3394.0 2705.7 2248.6 2794.9 4003.9 3577.5 3564.1 True False 2486.1024773979766 3082.5924408627034 3148.212419705679 2998.2091081082062 2894.747096004612 2992.015378101699 2657.1415136501523 3191.085634022272 3097.02304291446 2769.340265318344 2679.035605844123 0.9279841118851587 1.1506351144188791 1.1751289952392125 1.119137461841802 1.0805183364080455 1.1168255366128144 0.9918276217956155 1.1911322220059894 1.156021605744443 1.0337078981993475 1.0 11.387498040173616 -10.957282552496656 1.2477909711006743 1.0005594693874607 1.109313214806601 0.14407625355186393 0.07594468568603058 0.5482665815416461 1.5304589545023006 0.05001250381161752 0.011885093273462157 1.1033605386813088e-11 10.957282552496656 0.10875374541914029 LVSPS(ph)DQR ddPTM_A549_PD325901_60min_R1 1 LVSPSDQR 8 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 LVS(0.176)PS(0.824)DQR 76.605 0.0046221000000000005 8436700.0 2915.9 3560.7 2916.6 2819.9 3156.4 2938.4 3236.7 3406.4 3270.4 3308.9 3448.6 True False 3211.9200214278744 3860.772685277739 3114.538014940571 2994.0788185424367 2934.7053529888613 2914.4706446234163 3359.8743896902015 3338.456679730895 3132.956461122353 3099.9754892995943 3024.444062476568 1.0619869156375772 1.2765230916905579 1.0297885993600522 0.989960057681058 0.9703288579210078 0.9636384685643351 1.11090644107961 1.103824904930527 1.0358784611003615 1.02497365640189 1.0 11.56245426274593 -5.863595043288054 9.50682180768159 1.0212547736640223 1.168850118903767 0.4258491399782349 0.06428682629247826 0.17110489095440012 14.375536760981591 0.008462449970228953 0.026410668564142786 1.3690047554065148e-06 5.863595043288054 0.1475953452397447 LVSS(ph)KEDLAGPSAGSGSAR ddPTM_A549_PD325901_60min_R1 1 LVSSKEDLAGPSAGSGSAR 19 1 Q5JS13-2;Q5JS13-7;Q5JS13 Q5JS13-2 RALGPS1 Ras-specific guanine nucleotide-releasing factor RalGPS1 1 LVS(0.183)S(0.816)KEDLAGPSAGSGSAR 45.957 0.007746600000000001 13044000.0 2883.3 3410.3 3162.1 2842.0 4262.4 3612.6 3495.6 3278.9 3797.1 3293.6 4735.4 True False 3176.0104934267247 3697.697949448892 3376.699121251998 3017.543885349696 3963.023728481725 3583.180183353713 3628.6269708657155 3213.4997672527106 3637.521091770941 3085.6415339107075 4152.9758201738505 0.7647553539798292 0.8903730986071814 0.8130794079871728 0.7265979904557636 0.9542612093310541 0.8627982291511909 0.8737414153097128 0.773782440928873 0.8758830412883715 0.7429953044565373 1.0 12.019929756661533 -10.536736672162068 0.37709258179655963 1.0488484192815937 0.8252183370765631 0.0 0.09891804279096165 1.4178813838013975 0.28147341812750076 0.12722800736174605 0.02133972084269687 2.9057839982548322e-11 10.536736672162068 -0.22363008220503056 LVSVQEDAGKS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 LVSVQEDAGKSPAR 14 1 Q9Y2I7;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4;E9PDH4 Q9Y2I7;E9PDH4 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 LVSVQEDAGKS(1)PAR;LVSVQEDAGKS(1)PAR 78.95 0.00017197 15162500.0 4100.9 4106.5 4657.5 4810.9 6186.0 4360.9 5307.1 4900.9 7228.1 6862.5 7290.9 True False 4793.031662621104 4315.503309720348 5318.003534302628 5989.570715969506 5276.0475945446515 4822.367543468859 6271.331373784903 5595.61758337678 5590.946890903869 5312.256483786761 5480.368311396682 0.8745820335932114 0.7874476795192865 0.970373382249436 1.0929139020663836 0.9627177034019527 0.8799349367524297 1.144326625045141 1.0210294756541147 1.020177216789834 0.9693247208841194 1.0 12.420057138280349 -5.878309095622046 5.174860432863913 1.0125928331738405 0.8327012220935026 0.5074786773284128 0.06753361617545099 0.10690689246120955 4.36258361587467 0.00855079769660153 0.02794044396579021 1.3233993115381442e-06 5.878309095622046 -0.1798916110803379 LVSVQEDAGKS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 LVSVQEDAGKSPAR 14 1 Q9Y2I7;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4;E9PDH4 Q9Y2I7;E9PDH4 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 LVS(0.001)VQEDAGKS(0.999)PAR;LVSVQEDAGKS(1)PAR 105.6 5.8594e-06 54579000.0 8900.4 9340.7 9442.2 8915.5 10892.5 9749.0 10102.8 10129.6 9474.9 9684.8 10490.4 True False 9803.962055871829 10127.873570189504 10083.004472561151 9466.190186430407 10127.448377085017 9669.60737627065 10487.267582464287 9927.557181482533 9076.7029028523 9073.300075181687 9200.147304124628 1.0656309873947885 1.1008381969763632 1.0959611992343556 1.0289172415953065 1.1007919810745486 1.0510274516947735 1.139902138062791 1.0790650250819127 0.9865823451308235 0.9862124784799834 1.0 13.167441245095738 -8.752702972624448 12.866106748190335 0.9936617558284442 1.0834690455114608 0.6848816821050095 0.027723025386298537 0.20993370534471806 305.90973413940753 0.004450605030596504 0.004962745674533332 1.7672460814946339e-09 8.752702972624448 0.08980728968301666 LVTIS(ph)PNNKPK ddPTM_A549_MK2206_60min_R1 1 LVTISPNNKPK 11 1 Q6IQ26-2;Q6IQ26;H0YDE6 Q6IQ26-2 DENND5A DENN domain-containing protein 5A 1 LVT(0.087)IS(0.913)PNNKPK 48.14 0.008599500000000001 3318300.0 2052.7 2878.9 2877.0 2761.3 3350.1 2567.2 2352.0 2345.3 3730.5 3895.1 3908.0 True False 2399.1455763033346 3025.4237132238886 3285.0018611247797 3437.818623959466 2857.3047278506356 2838.8594000305575 2779.327955218872 2677.753457180021 2885.5477063843714 3015.1942047355633 2937.5357446869702 0.8167204707696221 1.0299189443722954 1.1182848981723068 1.1703069929199472 0.9726876457651805 0.9664084616383356 0.9461426844748209 0.9115645527116362 0.9823021597620972 1.026436600878492 1.0 11.52039069152913 LVTIS(ph)PNNKPK ddPTM_A549_PD325901_60min_R1 1 LVTISPNNKPK 11 1 Q6IQ26-2;Q6IQ26;H0YDE6 Q6IQ26-2 DENND5A DENN domain-containing protein 5A 1 LVT(0.09)IS(0.91)PNNKPK 57.678999999999995 0.0035695 6712800.0 3081.7 3653.7 3381.8 3873.9 4796.9 4477.9 3203.4 2943.4 4886.9 3656.6 3669.9 True False 3394.5519153723653 3961.610121661267 3611.309284415424 4113.182004734762 4459.982292406621 4441.433467043015 3325.307139967743 2884.6915779473707 4681.520587652526 3425.7216519607396 3218.525565412852 1.0546916115413656 1.2308773197994147 1.122038402684612 1.2779708972754886 1.385722189170967 1.3799590454622648 1.0331771714670825 0.8962773541235926 1.454554420185881 1.0643760884718372 1.0 11.652184213179698 -11.214781196967515 1.6684212073353852 0.9999177632323082 1.2410724805028377 0.10392620191393287 0.16548393853893067 0.5126753642878165 2.569484938511778 0.13323086587795835 0.02760164729878571 6.098440669812096e-12 11.214781196967515 0.2411547172705295 LVTSGAESGNLNT(ph)SPSSNQTR ddPTM_A549_MK2206_60min_R1 1 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.5)S(0.5)PSSNQTR 240.61 4.547799999999999e-86 28217000.0 1115.2 1299.5 1113.4 1424.3 1685.2 1135.7 1128.0 1166.2 1719.9 1530.2 1888.3 True False 1303.418495977727 1365.638999386725 1271.2968620703275 1773.2535639392563 1437.309312370941 1255.8790201833528 1332.9429989315008 1331.5124213377144 1330.3453961159312 1184.5267572299445 1419.382995571241 0.9182993596828012 0.9621356629238139 0.8956686574638615 1.2493129546233555 1.012629654473552 0.8848063025285964 0.9391003013919074 0.938092414445079 0.9372702084404808 0.8345363872372045 1.0 10.471048212508201 LVTSGAESGNLNT(ph)SPSSNQTR ddPTM_A549_PD325901_60min_R1 1 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.719)S(0.28)PS(0.001)SNQTR 265.29 9.731499999999999e-112 33939000.0 2867.9 2541.2 2669.2 2827.3 3272.1 3183.2 2912.6 3232.9 3109.0 3189.4 3770.2 True False 3159.0470967636047 2755.3558423421746 2850.3479632035155 3001.9358997358177 3042.278984132191 3157.277074586598 3023.440586835875 3168.417273339012 2978.3395418387313 2988.0207396935925 3306.4893012669345 0.9554082317923016 0.833317634291578 0.8620466311841259 0.907892216250504 0.9200934002618708 0.9548729141137207 0.9143959987039411 0.9582421065524035 0.9007558381324665 0.9036837767927102 1.0 11.691084518148187 -14.9999999999998 0.18048046835070405 1.379180079855157 0.8875250123301877 0.0 0.04511448154696152 33.38716645949819 0.37142877795794266 4.500937897035249 0.04108564928291763 1.0000000000004622e-15 14.9999999999998 -0.49165506752496935 LVTSGAESGNLNTS(ph)PSSNQTR ddPTM_A549_MK2206_60min_R1 1 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.473)S(0.525)PS(0.002)SNQTR 234.04 6.841199999999999e-77 23504000.0 1334.3 1099.7 1086.6 1257.8 1467.3 1146.2 735.73 1070.7 1713.7 1533.2 1761.2 True False 1559.4972194970223 1155.670032801525 1240.6962190817474 1565.9610564647878 1251.462113720557 1267.4901232140182 869.4026175566246 1222.475003881229 1325.5496862165662 1186.8490551463549 1323.8454333527873 1.1780055134891545 0.8729644743152989 0.9371911462046931 1.182888135587563 0.9453234359475703 0.9574305967154769 0.6567251702147469 0.9234272922520673 1.001287350336257 0.8965163343431464 1.0 10.370518973610276 -5.242958119796617 23.590561720635733 0.9695938902107205 1.1780059088922685 0.20497502923266875 0.12206784792195902 2320.109884862591 2961423.4665189437 0.016534455061791856 0.6964735141067109 5.715337485753348e-06 5.242958119796617 0.20841201868154802 LVTSGAESGNLNTS(ph)PSSNQTR ddPTM_A549_PD325901_60min_R1 1 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.017)S(0.983)PS(0.001)SNQTR 285.95 7.577499999999998e-128 38958000.0 3905.8 3871.6 4496.4 4360.1 4189.8 4582.4 4482.1 4141.0 4614.2 5163.1 4720.1 True False 4302.313940702009 4197.873319381381 4801.5527430497095 4629.413474494444 3895.52290202532 4545.08245368988 4652.66876819923 4058.4045064483466 4420.2812203127305 4837.100984859843 4139.557623179157 1.0393173213996367 1.0140874222587672 1.1599192909319 1.118335314037513 0.9410481159176569 1.0979633254142942 1.1239531350275072 0.9803957030875957 1.067814878469545 1.1685067403760347 1.0 12.015260885974595 -12.034783653842391 0.33121091244924045 0.9300074093206582 1.0666825422276778 0.0 0.07998992094567006 12.180904747566128 0.8546228942039682 0.684304448127377 0.021708453625726345 9.230311256187628e-13 12.034783653842391 0.1366751329070196 LVTSIGDVVNHDPVVGDR ddPTM_A549_PD325901_60min_R1 1 LVTSIGDVVNHDPVVGDR 18 0 P11216;H0Y4Z6 P11216 PYGB Glycogen phosphorylase, brain form;Alpha-1,4 glucan phosphorylase 0 46.925 0.024597 1038200.0 1713.6 1271.2 1050.1 1673.2 1840.4 1377.9 1396.2 1402.2 1633.3 1511.5 1323.1 False True 1887.5634105143536 1378.3284852767874 1121.3661007642775 1776.5497638870906 1711.1366530353246 1366.6788392412898 1449.333155029955 1374.2320209953803 1564.658080953748 1416.0636320457966 1160.367087821941 1.6266950608340602 1.1878383140493665 0.9663890957723819 1.5310239169414492 1.4746511435852614 1.1777986928314255 1.2490298718747839 1.1843079965107188 1.3484164600796102 1.220358321868478 1.0 10.180365565878157 -11.00157483335682 0.6388375635159358 0.9333215884041414 1.3029168541792586 0.09133705315865404 0.18933748031667758 1.3797648354178682 0.6981050127757303 0.30620290449843357 0.03543890054889139 9.963803788679233e-12 11.00157483335682 0.36959526577511725 LVVSSPT(ph)SPK ddPTM_A549_PD325901_60min_R1 2 LVVSSPTSPK 10 0 Q9Y4G2 Q9Y4G2 PLEKHM1 Pleckstrin homology domain-containing family M member 1 1 LVVS(0.004)S(0.06)PT(0.586)S(0.35)PK;LVVSS(0.106)PT(0.566)S(0.328)PK 157.38 1.4340000000000001e-08 17395900.0 13731.3 12638.599999999999 13494.6 13445.2 15704.5 14514.7 15161.6 14991.6 16120.0 16859.800000000003 16812.699999999997 True False 15125.291467551204 13703.699177170549 14410.424705621956 14275.6794677353 14601.470097583813 14396.49709553345 15738.582984745864 14692.580777317318 15442.532458810023 15795.269350688533 14744.844484486397 1.0258020342951117 0.929389197125051 0.9773195451999309 0.9681810806994455 0.9902763038936468 0.9763749702942303 1.0673956582794086 0.9964554589080904 1.047317418305611 1.0712401454832112 1.0 13.847922985764397 -7.658948715409114 13.99285719526448 1.0236282179850624 0.9757278188314793 0.4369068804945836 0.03157419612329808 0.5362576408196836 70.21543795171672 0.004327910988747144 0.00641935013572749 2.1930638926911906e-08 7.658948715409114 -0.04790039915358313 LVY(ph)DGIR ddPTM_A549_MK2206_60min_R1 1 LVYDGIR 7 0 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 1 LVY(1)DGIR 72.234 0.021057 598090.0 425.59 473.25 346.32 369.94 379.07 322.38 472.84 418.15 554.18 576.86 554.54 True False 497.4191873234942 497.3364035858161 395.4333835748116 460.5753166072376 323.30930515099243 356.49403762147523 558.7489074599027 477.4240430306678 428.65911484361084 446.54692535333055 416.83241347459403 1.1933313515068376 1.1931327495387514 0.9486627498053563 1.104941222703905 0.7756337911823601 0.855245480191534 1.340464151533548 1.1453620870099797 1.0283727968044347 1.0712864712968095 1.0 8.703323657748244 -5.7453981397248945 24.12855660149274 1.0207214292467295 1.1932323039183834 0.16260972033483279 0.1415983920528192 206.08968295784643 309982.8280784469 0.01911154836971263 0.07348834496872443 1.7972225548292558e-06 5.7453981397248945 0.17251087467165394 LWAPDS(ph)PNR ddPTM_A549_PD325901_60min_R1 1 LWAPDSPNR 9 0 E5RIM3;Q9Y263 E5RIM3 PLAA Phospholipase A-2-activating protein 1 LWAPDS(1)PNR 63.283 0.0067971 3003100.0 730.24 985.64 1115.3 873.27 923.15 989.99 828.13 1200.7 823.44 958.04 1075.0 True False 804.373427225725 1068.703341903881 1190.9909648437285 927.2099045599333 858.3111286946096 981.9278496701387 859.6449403201239 1176.7510965690717 788.833680389735 897.5491908998703 942.7818149864617 0.8531914961016466 1.133563805448695 1.2632731623709046 0.9834830178319127 0.9104027199622374 1.0415218389466274 0.9118174816858006 1.2481690650619623 0.8367086295582215 0.9520221716545934 1.0 9.880780120953098 -7.753089355536963 0.645351352114232 0.9360390527229395 1.0623099071688011 0.00264814062011709 0.1397571733687246 1.2941667154205883 1.093875480999693 0.03280080637060855 0.06468002429409003 1.76567449802991e-08 7.753089355536963 0.1262708544458616 LYADS(ph)DS(ph)GDDSDKR ddPTM_A549_PD325901_60min_R1 2 LYADSDSGDDSDKR 14 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 2 LY(0.002)ADS(0.999)DS(0.97)GDDS(0.03)DKR;LY(0.002)ADS(0.989)DS(0.867)GDDS(0.142)DKR 58.98 0.0022478000000000003 18207200.0 7424.5 7580.0 7400.8 7940.700000000001 8476.7 8149.0 7576.6 7787.799999999999 10530.5 8652.7 10253.2 True False 8178.229774371975 8218.793202012313 7903.062792625716 8431.17900436184 7881.325835027459 8082.637245792335 7864.931659074602 7632.466219589089 10087.939705800185 8106.367045320981 8992.121400389939 0.9094883632262049 0.9139993596678877 0.8788874661192857 0.9376184583090956 0.8764701324746005 0.8988576650490768 0.8746469613648169 0.8487948371402226 1.1218642694662382 0.9014966195818322 1.0 13.134445797818595 -8.757213952938805 24.999999068585662 1.0575470183231985 0.8932256525397488 0.367149747893719 0.05823478568198501 40.393925377250646 238992.7538410622 0.008059380608091011 0.008981409267415572 1.7489848479777068e-09 8.757213952938805 -0.1643213657834497 LYAGSTVK ddPTM_A549_PD325901_60min_R1 2 LYAGSTVK 8 0 E2QRB9;E9PIR7;F8W809;A0A087WSW9;A0A182DWI3;A0A087WSY9;Q16881-7;Q16881-5;Q16881-2;Q16881-4;Q16881-3;Q16881-6;Q16881 E2QRB9 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ; 133.12 0.0029833000000000004 14433700.0 9075.3 9555.5 10114.4 10394.5 11176.2 11349.3 10521.8 11323.5 12720.599999999999 11451.099999999999 12165.4 False True 9996.617775117245 10360.775520030167 10800.824006828123 11036.544657377694 10391.222267796888 11256.875063648424 10922.21285674988 11097.643909386094 12185.997419078098 10728.075591743042 10669.132922824467 0.9369662790245579 0.9710981759225596 1.0123431852387863 1.0344368879093466 0.9739518987121207 1.0550880887018101 1.0237207592928195 1.0401636186990335 1.1421731744487507 1.0055245978604765 1.0 13.381155313090316 -5.919808543752012 0.5335741788960452 1.0634458925568548 0.9121901521288287 0.31795079837974094 0.04226240365078798 1.9977627406879461 0.5720077318650123 0.010877929283347366 0.1638120726034722 1.2027945628870338e-06 5.919808543752012 -0.15125574042802614 LYAT(ph)LGPNWR ddPTM_A549_MK2206_60min_R1 1 LYATLGPNWR 10 0 Q5JS13-2;Q5JS13-7 Q5JS13-2 RALGPS1 Ras-specific guanine nucleotide-releasing factor RalGPS1 1 LYAT(1)LGPNWR 48.44 0.033024 666580.0 556.6 454.33 767.68 459.62 923.24 757.58 519.96 562.42 1169.8 1022.0 853.45 True False 650.540472436516 477.45345639966985 876.5485675176469 572.2269206331257 787.4326190086331 837.746612759096 614.4300015287438 642.1447573390132 904.8421677867409 791.1294901901738 641.5148109782746 1.014069295523322 0.7442594437867768 1.3663730790267474 0.8919933115192015 1.227458206004382 1.3058881859353781 0.9577799156215459 1.000981966978717 1.4104774391832149 1.233220927485283 1.0 9.325338763707363 -5.753534222353756 24.99989258612325 1.167068660489794 0.8791643794246558 0.2671687037518814 0.17519542560158233 186.32483538466553 589233.5714018327 0.02650431200937796 0.0990519702456685 1.7638667665076051e-06 5.753534222353756 -0.2879042810651382 LYAT(ph)LGPNWR ddPTM_A549_PD325901_60min_R1 1 LYATLGPNWR 10 0 Q5JS13-2;Q5JS13-7 Q5JS13-2 RALGPS1 Ras-specific guanine nucleotide-releasing factor RalGPS1 1 LYAT(1)LGPNWR 93.096 0.00064252 957950.0 1217.4 1111.9 1220.1 1280.3 1173.9 990.41 887.9 1113.9 1339.6 1033.5 1552.2 True False 1340.9895517974883 1205.6037152133888 1302.9033230573239 1359.381223227732 1091.449313735149 982.3444293293883 921.6895203775233 1091.6823906623547 1283.3012705844856 968.2446336217865 1361.2892402064979 0.9850878947622254 0.8856337651140967 0.9571098371861683 0.9985983750385948 0.8017761997219517 0.721627998161782 0.6770710390965182 0.8019474175060358 0.942710213730785 0.7112703200937008 1.0 10.41075792099481 -8.937543646015351 4.329800435737059 0.9758724098057764 0.8511433423344138 0.0 0.12610993216075933 0.2473456152601075 8.747505764209109 0.019580897982177572 0.020404523626623906 1.1546659364738633e-09 8.937543646015351 -0.12472906747136259 LYAYEPADTALLLDNMKK ddPTM_A549_MK2206_60min_R1 1 LYAYEPADTALLLDNMKK 18 1 O95994 O95994 AGR2 Anterior gradient protein 2 homolog 0 69.594 0.00099699 1508600.0 1688.6 2065.8 1742.3 1874.4 2597.3 1867.9 2087.8 1810.6 3344.0 2977.9 2674.8 False True 1973.5943976936767 2170.9403962547876 1989.3843387687532 2333.628084145015 2215.2406106225044 2065.5599381883285 2467.1262350790676 2067.258094729947 2586.5893392706994 2305.19032175863 2010.5733392755142 0.981607762890578 1.0797618539182758 0.9894612148222376 1.1606779213465097 1.1017954766179978 1.0273487158307928 1.2270759722537983 1.028193328911274 1.2864934040171574 1.1465338153689422 1.0 10.973391246654291 -5.9862250188209725 0.8144473039055221 1.1308953707861271 0.9867866843246881 0.18763118116183775 0.08738536922992522 1.8111400016350396 1.5397409212258513 0.018125344608376823 0.1872808857530047 1.0322264448760534e-06 5.9862250188209725 -0.14410868646143904 LYAYEPADTALLLDNMKK ddPTM_A549_PD325901_60min_R1 2 LYAYEPADTALLLDNMKK 18 1 O95994 O95994 AGR2 Anterior gradient protein 2 homolog 0 ; 121.79 1.8173999999999998e-10 10717100.0 5005.8 5519.1 5981.7 6218.7 7143.8 6708.9 6773.4 7408.2 7197.6 6239.1 7161.2 False True 5513.98513092481 5984.213926283137 6387.65413288418 6602.814975307583 6642.044132772089 6654.264942728709 7031.165443546696 7260.437639379524 6895.109902328231 5845.162161228535 6280.417798587024 0.877964700400243 0.9528369159818433 1.0170747134563696 1.051333714899205 1.0575799804698383 1.0595258398614489 1.1195378506711093 1.1560437334301208 1.0978743968083624 0.9306963881516906 1.0 12.616644820833173 -5.508566995865423 1.2004541796129025 1.0631062173434442 0.8355422619633267 0.5097856435359943 0.05608675866720934 0.5810981349237935 0.9275048778713484 0.007750830272483851 0.14627917032969193 3.100509055698647e-06 5.508566995865423 -0.22756395538011753 LYDIDVAK ddPTM_A549_PD325901_60min_R1 2 LYDIDVAK 8 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 ; 125.96 0.0030083 6288200.0 3217.4 3523.8 3008.6000000000004 3156.4 3737.3 2846.8999999999996 3074.7 3463.2999999999997 3497.8 3616.5 3854.6 False True 3544.0280794753053 3820.7629927771777 3212.7816881815147 3351.363659295491 3474.8049409850687 2823.715790286687 3191.7093910403996 3394.2217645937094 3350.799629927152 3388.15357280425 3380.508636322618 1.0483712543715218 1.1302331701579313 0.9503841089654604 0.9913785231269719 1.0278941173672103 0.8352931745083129 0.9441506395654123 1.0040565280986855 0.9912116756406859 1.002261475211005 1.0 11.723024617528315 -5.764542110966298 24.99997847568735 0.9817342385097557 1.0893022212141588 0.4136071737609023 0.05287885357229481 55.6496215158623 448410.6787027913 0.0072273733811766844 0.02394274624165114 1.7197205820238636e-06 5.764542110966298 0.10756798270440304 LYDLNHNEIGELIR ddPTM_A549_MK2206_60min_R1 1 LYDLNHNEIGELIR 14 0 O75643;A0A494C1A5 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 70.622 0.0024366 789180.0 0.0 206.24 281.23 0.0 264.41 309.01 219.81 145.88 312.67 216.67 240.38 False True 0.0 216.73673507773628 321.112642823817 0.0 225.5156392618089 341.70923309576307 259.74663173327406 166.5589367387632 241.8507442313902 167.7240965161497 180.68701184950206 0.0 1.199514745743102 1.7771761209448653 0.0 1.2481009949383939 1.8911665514750986 1.4375500987842025 0.921809127473388 1.338506524380583 0.9282576251570896 1.0 7.497348995845758 LYDLNHNEIGELIR ddPTM_A549_PD325901_60min_R1 2 LYDLNHNEIGELIR 14 0 O75643;A0A494C1A5 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 ; 88.101 8.351200000000001e-05 2062230.0 471.48 585.84 503.84000000000003 592.79 552.89 694.02 365.6 657.39 819.29 759.98 692.6600000000001 False True 519.344302514769 635.210792805659 538.0336122360475 629.4052919762305 514.0569137669534 688.3681312215978 379.51310806399624 644.2778407375215 784.8580904577215 711.994733101002 607.4672111335093 0.8549338844901496 1.0456709122133214 0.8856998408722315 1.0361140164286162 0.8462298941332881 1.1331774268723585 0.624746654812595 1.0605968996010913 1.292017208621364 1.1720710518226136 1.0 9.246662729173444 -8.513612743301751 24.9821974547285 1.1399186025468837 0.9254269112580547 0.35851443844465214 0.14040325175585083 413.45604887353846 1114726.8890745929 0.025085496371530926 0.029217670931316213 3.0646949781259826e-09 8.513612743301751 -0.21449169128882906 LYDS(ph)SPSR ddPTM_A549_PD325901_60min_R1 1 LYDSSPSR 8 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 LYDS(0.608)S(0.386)PS(0.006)R 72.23 0.0057533 17327000.0 6322.8 6429.5 6167.7 6930.8 7125.7 6357.9 5992.8 6478.9 7204.7 7264.1 7467.0 True False 6964.686001400649 6971.336529332214 6586.277211393045 7358.899775011147 6625.215414330475 6306.123370355026 6220.859283385992 6349.6732569012765 6901.911514019147 6805.443486300943 6548.606337212934 1.0635371318357179 1.0645526956960423 1.0057525024776712 1.1237352493146002 1.0116985314390032 0.9629718211216972 0.9499516329200467 0.9696220737561815 1.0539512010057057 1.0392201234678764 1.0 12.676972192178466 -6.938660605201661 24.999991083501907 1.0102597124472383 1.0611546565306247 0.36742003116469246 0.03974977676630858 80.92525574432449 32981.83935106401 0.006401250448095733 0.012097226144183381 1.1517000741501425e-07 6.938660605201661 0.05089494408338635 LYDSS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 LYDSSPSR 8 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 LYDS(0.094)S(0.901)PS(0.006)R 98.009 0.002127 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 LYEALT(ph)PVH ddPTM_A549_PD325901_60min_R1 2 LYEALTPVH 9 0 G5E9W3;Q9UKF6 G5E9W3 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 1 LYEALT(1)PVH;LYEALT(1)PVH 130.75 5.22e-05 40242000.0 2046.21 1815.3400000000001 2279.76 2092.01 2288.97 2031.3700000000001 2043.67 1873.7399999999998 1938.44 2150.47 2568.0 True False 2253.939732859814 1968.3250727362833 2434.478222910551 2221.22870640057 2128.200643717816 2014.8271962185765 2121.4429801891347 1836.3667857794057 1856.9741079066814 2014.688957198494 2252.1522798932388 1.000793664346116 0.8739751260645617 1.0809563121664025 0.9862693238957471 0.9449630305721164 0.8946229854022516 0.941962494778417 0.8153830458864252 0.8245331030611791 0.8945616045527786 1.0 11.137088663598577 -6.986373968192546 3.363937949337944 0.9074966794032718 0.9839234688118182 0.28419134503933385 0.06556882965614123 0.3570433758283138 8.510310414584927 0.012038840305026437 0.023079686202129336 1.0318724843168402e-07 6.986373968192546 0.07642678940854641 LYEEDDLDRLEQMEDS(ph)EGTVR ddPTM_A549_PD325901_60min_R1 2 LYEEDDLDRLEQMEDSEGTVR 21 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;H0YFE4 Q86W92-2 PPFIBP1 Liprin-beta-1 1 LYEEDDLDRLEQMEDS(0.968)EGT(0.032)VR;LYEEDDLDRLEQMEDS(0.996)EGT(0.004)VR 132.26 4.1762e-18 5307900.0 1508.66 1670.4699999999998 1912.79 1827.67 1795.68 2162.8 1717.15 1997.87 1915.69 2071.6499999999996 2222.58 True False 1661.8180525832086 1811.246369414974 2042.6034319406747 1940.5610249602678 1669.5576315596995 2145.1868738740545 1782.4970829105337 1958.020915551306 1835.1802112914258 1940.8456654499994 1949.2167500954497 0.8525568295582481 0.9292175276691422 1.0479098498618238 0.9955593829497115 0.856527439279364 1.100537882084693 0.9144683795802842 1.0045167708801113 0.9414962246766864 0.9957054110862528 1.0 10.928678809788952 -5.416989731935655 3.8761777652786233 0.9765878111061674 0.8559271836139701 0.27835432505444757 0.062031638574270784 0.22311478937021784 5.453465751447822 0.007653033157511046 0.05486741098576782 3.828337945844078e-06 5.416989731935655 -0.1206606274921973 LYEQLSGK ddPTM_A549_MK2206_60min_R1 1 LYEQLSGK 8 0 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 0 109.71 0.0045727 1535300.0 2105.1 2431.7 2984.0 2472.4 3245.6 2484.8 2393.0 2472.0 3625.6 3652.1 3599.0 False True 2460.389415246333 2555.463143369526 3407.17607007172 3078.138110990253 2768.176539420321 2747.7398867232528 2827.777124506279 2822.413570182497 2804.4073888934936 2827.088073506391 2705.2689726531244 0.9094805138113007 0.9446244233760311 1.2594592643149336 1.1378307081870114 1.0232537198345575 1.0156993313786749 1.0452850171615313 1.043302384610757 1.0366464175069223 1.0450303101409528 1.0 11.401556326485473 -6.937384829866081 24.999920740018265 1.0220000979651724 1.0699596843952952 0.024650529145215594 0.08751293046077352 164.1940880704391 65555.0404475854 0.012904322926578532 0.024386876437908885 1.1550882608166434e-07 6.937384829866081 0.04795958643012277 LYEQLSGK ddPTM_A549_PD325901_60min_R1 2 LYEQLSGK 8 0 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 0 ; 117.89 0.0034748000000000005 6523600.0 6689.0 6179.200000000001 7157.200000000001 7194.6 8451.6 8332.7 7491.5 7923.6 8704.4 7405.4 8517.6 False True 7368.062355818457 6699.942869904291 7642.930631739925 7638.994101877881 7857.988772437164 8264.841253897883 7776.593132006093 7765.557582056046 8338.584338366378 6937.821780186531 7469.989197515049 0.9863551554089932 0.8969146665075606 1.0231514972314024 1.0226245179068068 1.0519411159324281 1.106406051650951 1.0410447627679351 1.039567444707861 1.1162779647847783 0.9287592788614007 1.0 12.866890441371012 -5.937204620861149 4.286882552356467 1.0548846760390176 0.9420344916874697 0.288381972983763 0.053109711960679845 0.13439070288848803 4.968236401248506 0.0064871613567730885 0.02148361247616183 1.1555676601823291e-06 5.937204620861149 -0.11285018435154792 LYEVAIDGKEEDLGS(ph)PTGELTSK ddPTM_A549_PD325901_60min_R1 2 LYEVAIDGKEEDLGSPTGELTSK 23 1 Q8ND04;Q8ND04-2;Q8ND04-3 Q8ND04 SMG8 Protein SMG8 1 LYEVAIDGKEEDLGS(0.967)PT(0.03)GELT(0.002)SK;LYEVAIDGKEEDLGS(0.97)PT(0.028)GELT(0.001)SK 90.09700000000001 2.917e-07 6090000.0 2481.8 2272.6099999999997 3080.7 2351.8 2519.8 2547.93 2249.19 3096.6 2617.4 2612.3 2762.2 True False 2733.750508995405 2464.1308204254897 3289.7748277540327 2497.0653446746724 2342.8179408380834 2527.1805028434987 2334.784156253994 3034.8358837642954 2507.3997802536824 2447.358932182092 2422.4669110284685 1.1284985964306855 1.017198959130192 1.3580267341432313 1.0307944076786306 0.9671207190373676 1.0432260153227744 0.963804353993323 1.2527873425011378 1.0350604868279316 1.010275484482492 1.0 11.242261244370075 -2.000000014572669 0.08820789992932905 0.9387343671530803 1.4838229328619006 0.09242302879216502 0.11354568335142202 223.53070690328943 1.379376089697943 1.120432412604675 14.790460132162448 0.009999999664451906 2.000000014572669 0.5450885657088202 LYGS(ph)PTQIGPSYR ddPTM_A549_MK2206_60min_R1 1 LYGSPTQIGPSYR 13 0 E7EWD6;Q76L83;Q76L83-2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 LYGS(0.499)PT(0.499)QIGPS(0.001)YR 65.043 0.005654600000000001 2255300.0 1787.5 2167.7 2510.1 2224.8 2590.8 2120.1 1959.8 1897.4 3431.9 2322.6 3091.8 True False 2089.186299820827 2278.026671004699 2866.0699240908275 2769.876099875068 2209.696752012007 2344.4475747915167 2315.870291937903 2166.3622605437986 2654.5801296181558 1797.9230468842452 2324.020730660997 0.8989533837878554 0.9802092730716665 1.2332376756706733 1.1918465542634213 0.9508076769106643 1.0087894414456062 0.9964929578228092 0.9321613322819383 1.1422359941097175 0.7736260796489887 1.0 11.182407222547567 -11.395113218791533 2.1384822528279552 0.9994035541694308 1.0586717178236285 0.03452230395743572 0.12545789392972473 1.1132431395413833 9.205057722835932 0.08873396291951056 0.016301142756348787 4.026120613287034e-12 11.395113218791533 0.059268163654197625 LYHS(ph)LGPVTR ddPTM_A549_MK2206_60min_R1 2 LYHSLGPVTR 10 0 Q86X27 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 LYHS(1)LGPVTR;LYHS(1)LGPVTR 136.38 1.653e-07 42066000.0 2623.2 3325.0 2830.4 2493.1000000000004 4422.5 2901.8 2978.3 3581.5 4833.3 4985.2 5496.799999999999 True False 3065.9320289174775 3494.228297776731 3231.793280405831 3103.9096119195115 3771.9561084503257 3208.8665499410554 3519.4185582603645 4089.188592883745 3738.5652671940998 3859.0398576282355 4131.792856037704 0.7420343022369319 0.8456930004781549 0.7821769853934661 0.751225852812014 0.912910264351332 0.7766281277271693 0.8517896905498324 0.989688673987685 0.9048288230933482 0.9339867684772967 1.0 12.012552212374688 -8.070325741696546 0.26342398360838265 1.0128922057341216 0.7367519597084667 0.6016895863021423 0.05568760987044207 0.8657855665327766 0.17627198631583607 0.05282162834910567 0.08535341158878769 8.504998831940417e-09 8.070325741696546 -0.2761402460256549 LYHS(ph)LGPVTR ddPTM_A549_PD325901_60min_R1 2 LYHSLGPVTR 10 0 Q86X27 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 LYHS(1)LGPVTR;LYHS(1)LGPVTR 143.42 1.4072e-08 59562000.0 3378.0 3489.6000000000004 3289.6 3513.3 3822.1 3786.8 3960.6 3631.4 4285.0 3950.2 3992.3999999999996 True False 3720.9320732478336 3783.680838752266 3512.8520379717816 3730.3085617167817 3553.648881529187 3755.9615563095404 4111.322800323478 3558.968878221809 4104.916351488892 3700.783697854649 3501.3601099087887 1.0627104771993203 1.0806317316646508 1.0032821325719885 1.0653884332434338 1.0149338456996817 1.0727150131402463 1.1742073569320977 1.0164532543082296 1.1723776540070956 1.0569560347081965 1.0 11.773699733192935 -7.5098838064831375 24.472668242103317 1.0856120660909845 1.045889546600987 0.10267913163456932 0.054734686448171053 1107.4184491507854 2085540.4939997306 0.010474235038343948 0.016286145469361843 3.091122337638517e-08 7.5098838064831375 -0.0397225194899975 LYINHT(ph)PPPLSK ddPTM_A549_MK2206_60min_R1 2 LYINHTPPPLSK 12 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 LYINHT(1)PPPLSK;LYINHT(1)PPPLSK 89.624 0.00024449 50305000.0 4250.8 4660.5 4910.0 3932.3 6690.799999999999 4703.1 5070.9 4816.6 6526.299999999999 5832.7 6320.799999999999 True False 4968.23111791797 4897.699543395023 5606.3118311166745 4895.713676527653 5706.592183249164 5200.778920334885 5992.216891207222 5499.367800218855 5048.103470359557 4515.089019013917 4751.170914794627 1.0456856229792622 1.030840529887932 1.1799852987100996 1.0304225556868383 1.2010917488738324 1.0946309896241004 1.2612084470689349 1.1574763145426794 1.0624967109981909 0.950310797061504 1.0 12.21406739069341 -9.13450080414687 2.075365848227697 1.0217576338078789 1.1258494950413895 0.3424532585017199 0.07401936575490492 0.2686761880029114 2.3881386611211655 0.014276670135070096 0.013574544149117334 7.336673559464514e-10 9.13450080414687 0.10409186123351066 LYINHT(ph)PPPLSK ddPTM_A549_PD325901_60min_R1 2 LYINHTPPPLSK 12 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 LYINHT(1)PPPLSK;LYINHT(1)PPPLSK 107.07 0.00012139 94866000.0 8642.4 8506.3 9753.9 9937.4 11056.7 12166.6 9868.2 9634.2 11240.2 10988.4 10064.3 True False 9519.770085801383 9223.155753862446 10415.858308965515 10551.210628527117 10280.115535544275 12067.519243423372 10243.739751086241 9442.038323116314 10767.813482848418 10294.590548707927 8826.454902854184 1.0785496771442182 1.0449445281683796 1.1800726819096272 1.195407527105271 1.164693599943509 1.3671988783992013 1.1605723774528949 1.0697429972777712 1.2199477141571824 1.166333557698119 1.0 13.107618388329884 -10.892188960474257 1.0102993499703383 0.9946363302617546 1.1696964200221092 0.0 0.09620416894800113 0.538444338030787 0.9247351263594416 0.07085481471455517 0.01495453758612901 1.2817727650953779e-11 10.892188960474257 0.1750600897603546 LYINHTPPPLS(ph)KSKER ddPTM_A549_MK2206_60min_R1 4 LYINHTPPPLSKSKER 16 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 LYINHT(0.004)PPPLS(0.545)KS(0.451)KER;LYINHT(0.001)PPPLS(0.499)KS(0.499)KER;LYINHT(0.027)PPPLS(0.564)KS(0.409)KER;LYINHT(0.001)PPPLS(0.585)KS(0.414)KER 82.48200000000001 5.1043e-05 74032000.0 7111.2 8036.700000000001 8704.9 8853.4 10344.599999999999 7941.5 7584.2 6904.1 10349.2 11919.0 11946.8 True False 8311.396707852233 8445.73370247888 9939.385714600317 11022.48339744423 8822.92304340876 8781.864258858945 8962.15096852508 7882.777317919485 8005.12272427641 9226.489621894987 8980.079845093731 0.9255370610533231 0.9404965042814412 1.10682598440711 1.2274371261260406 0.9824993981795348 0.9779271911103239 0.9980034836128494 0.8778070411285087 0.8914311300528147 1.027439597537196 1.0 13.132512557201856 -6.986980724924866 24.984056585533935 0.9488642001819076 1.0536343066695006 0.17615850259879628 0.08667693853064115 274.6473075400919 527046.27386273 0.013159149199038645 0.024858548365407136 1.0304318525691428e-07 6.986980724924866 0.104770106487593 LYINHTPPPLS(ph)KSKER ddPTM_A549_PD325901_60min_R1 2 LYINHTPPPLSKSKER 16 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 LYINHT(0.001)PPPLS(0.499)KS(0.499)KER;LYINHTPPPLS(0.577)KS(0.423)KER 87.16 2.7936000000000002e-06 65886000.0 4230.5 3768.0 4602.2 4272.1 5205.9 4895.8 4015.0 4683.2 5777.6 5366.1 5168.9 True False 4659.977245670502 4085.5425837971525 4914.532967276792 4535.977914356945 4840.255543380021 4855.930227997316 4167.793022092304 4589.7899021006715 5534.787564145215 5027.2835302156445 4533.1580683567645 1.027975900112327 0.9012574726471276 1.0841300685237902 1.0006220489022573 1.0677447091834098 1.0712024938847002 0.9194016531620963 1.0124927992560462 1.2209562253697306 1.1090024778328538 1.0 12.146300752627326 -8.58408336876431 24.999223636725063 1.1049923710548542 1.009779457437502 0.27191073098082585 0.07230491321136519 86.69481294131452 35410.15954697118 0.01564579387727816 0.0177406635846168 2.605653311204012e-09 8.58408336876431 -0.09521291361735207 LYINHTPPPLSKS(ph)K ddPTM_A549_PD325901_60min_R1 1 LYINHTPPPLSKSK 14 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 LYINHT(0.06)PPPLS(0.442)KS(0.498)K 52.019 0.0095635 2330700.0 2620.1 2276.8 2571.9 2325.5 2662.2 2993.2 2701.7 2378.2 3227.5 2868.8 3114.8 True False 2886.0906231843232 2468.673926430296 2746.4446000910834 2469.1408534063066 2475.2162560914167 2968.824371592296 2804.514671926968 2330.7649353381908 3091.8593989335823 2687.663478407528 2731.6993463440263 1.0565184001844592 0.9037136278317924 1.0053978318539305 0.9038845569556858 0.9061085947851932 1.0868049500270323 1.0266556880355058 0.853228939142799 1.1318446896696654 0.9838796798793273 1.0 11.41558299251879 -8.780047270827792 24.999990147762723 1.0622599808693558 0.9686500693147386 0.12138865206777794 0.07798782740881695 266.5332650253233 358090.04316847323 0.013841441562215673 0.014748233672079164 1.6594062793594267e-09 8.780047270827792 -0.09360991155461718 LYINHTPPPLSKS(ph)KER ddPTM_A549_PD325901_60min_R1 2 LYINHTPPPLSKSKER 16 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 LYINHTPPPLS(0.439)KS(0.561)KER;LYINHTPPPLS(0.168)KS(0.832)KER 113.88 5.0754e-08 64298000.0 5748.0 4336.3 5820.6 5291.7 5958.8 6508.7 5673.799999999999 6089.1 6330.3 6135.0 5786.0 True False 6331.532728546045 4701.735219246173 6215.620918111185 5618.556290677336 5540.274444744021 6455.695305152605 5889.71956382249 5967.6481236934615 6064.2595052112365 5747.635052994348 5074.35868047597 1.2477503320581496 0.9265673783243787 1.2249076798662892 1.107244608524662 1.0918176647742113 1.2722189564548219 1.160682548217116 1.1760398701523602 1.1950790015187525 1.132682061894613 1.0 12.309009784405875 -10.832011382031776 1.0578103136181836 0.9992755604790975 1.1544582849178868 0.05513746122112195 0.09705407305306656 0.5164802859048889 1.0180971831136116 0.05974238648041052 0.014434270174110135 1.4722739164299227e-11 10.832011382031776 0.15518272443878933 LYKS(ph)EPELTTVAEVDESNGEEK ddPTM_A549_MK2206_60min_R1 2 LYKSEPELTTVAEVDESNGEEK 22 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;A0JP02 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 LYKS(0.998)EPELT(0.002)TVAEVDESNGEEK;LYKS(1)EPELTTVAEVDESNGEEK 178.85 2.3018e-41 16690900.0 3113.2 3268.6 3480.8 2475.3 4651.3 3875.6000000000004 3474.9 2993.0 5257.5 4833.3 4814.4 True False 3638.632049567661 3434.95777868061 3974.429780397335 3081.7486111204394 3967.0999315398503 4285.7134195849285 4106.244350165843 3417.2669156780807 4066.6846445022998 3741.454173127366 3618.851609319589 1.0054659440019955 0.9491844788094104 1.09825718472734 0.8515819226143581 1.0962317220533224 1.184274427983722 1.1346816044048549 0.944295949266787 1.1237500410432446 1.0338788591087957 1.0 11.82131623600672 -5.755194771570217 24.995995163759403 1.0561089136961204 0.9773252035635093 0.09020811529726513 0.09051435528136506 269.2417961911949 1077693.0244399887 0.012610872506235039 0.046552276488061727 1.7571354004530008e-06 5.755194771570217 -0.0787837101326111 LYKS(ph)EPELTTVAEVDESNGEEK ddPTM_A549_PD325901_60min_R1 1 LYKSEPELTTVAEVDESNGEEK 22 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;A0JP02 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 LYKS(0.991)EPELT(0.008)T(0.001)VAEVDESNGEEK 195.46 7.884799999999998e-61 28808000.0 3938.5 3928.1 3966.2 3901.7 4466.7 3111.2 4036.4 3735.1 4209.3 4652.0 4515.5 True False 4338.333620629542 4259.134772668151 4235.370182698103 4142.699147596377 4152.974401278464 3085.8634187150733 4190.007410802833 3660.600500370733 4032.3977592350548 4358.2719260847125 3960.1221261128976 1.0955050077932524 1.07550591548265 1.0695049414689084 1.0461038866149035 1.0486985676259593 0.7792344075368295 1.0580500493088534 0.9243655583833815 1.0182508596504067 1.1005397781412927 1.0 11.951329206891376 -7.019130247045779 24.988673437871174 0.9884762857013251 1.0687295697005177 0.23361346657452087 0.07838469863694517 851.6429524431404 1112448.6853701747 0.01008217389301436 0.017643501186447634 9.5690704713898e-08 7.019130247045779 0.08025328399919263 LYLPQEPTSEET(ph)PRTK ddPTM_A549_MK2206_60min_R1 1 LYLPQEPTSEETPRTK 16 1 Q6P5Z2 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 1 LYLPQEPT(0.074)S(0.074)EET(0.741)PRT(0.11)K 67.727 0.00085682 2373700.0 1271.4 1426.6 1538.2 1267.9 1428.0 1335.7 1085.6 1118.8 1627.8 2082.4 2321.5 True False 1485.981237254378 1499.2078464987326 1756.3398897400548 1578.5355569181947 1217.9430916601607 1477.0428874340973 1282.8394677659896 1277.3933261813022 1259.1058990624533 1611.9843937103901 1745.0074798594683 0.8515615287643634 0.859141215039072 1.0064941898595754 0.9046010261487933 0.6979586653452317 0.846439287213284 0.7351484062803566 0.732027421615508 0.7215475656092051 0.9237693318312934 1.0 10.769017505127406 -6.567468163674825 24.999802030434765 0.8321991102228666 0.9101532227711508 0.16420217190364583 0.09619076120822277 274.55290114467186 153931.8241085113 0.01794891406730623 0.03736365887802585 2.707271655491272e-07 6.567468163674825 0.07795411254828422 LYLPQEPTSEET(ph)PRTK ddPTM_A549_PD325901_60min_R1 2 LYLPQEPTSEETPRTK 16 1 Q6P5Z2 Q6P5Z2 PKN3 Serine/threonine-protein kinase N3 1 LYLPQEPT(0.061)S(0.042)EET(0.896)PRT(0.001)K;LYLPQEPT(0.02)S(0.02)EET(0.961)PRTK 102.33 4.5351999999999995e-07 8150800.0 4523.9 4581.1 4013.7000000000003 4141.3 5179.2 5556.8 3848.2 5322.4 4941.2 5155.299999999999 5817.5 True False 4983.162997680841 4967.165374371847 4286.09381833881 4397.098695425297 4815.430859270024 5511.547263151167 3994.645356815837 5216.240556657973 4733.538547485863 4829.793478190999 5101.984380170919 0.9767107514182358 0.9735751825656205 0.8400836809687025 0.86184087754459 0.9438348886338033 1.0802752130273137 0.7829591506279786 1.0223944583074607 0.9277838179754064 0.9466499930815543 1.0 12.316842766768985 -12.102549772062227 0.3124904096360354 1.081064049721379 0.9262399219120669 0.01690548363133193 0.08103718095449423 15.475449266079023 0.9577452233964497 0.9379545120244278 0.029896696907053277 7.896783435943043e-13 12.102549772062227 -0.1548241278093121 LYNSEESRPYT(ph)NK ddPTM_A549_MK2206_60min_R1 7 LYNSEESRPYTNK 13 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 LYNSEES(0.001)RPYT(0.999)NK;LYNSEESRPYT(1)NK;LYNSEESRPYT(1)NK;LYNSEESRPYT(1)NK;LYNSEESRPYT(1)NK;LYNSEES(0.023)RPYT(0.977)NK;LYNSEES(0.092)RPYT(0.908)NK 166.48 7.8843e-20 737113000.0 45480.83 43827.34 41068.31 37610.89 67190.76 52528.21 46800.37 49137.810000000005 73363.0 62064.7 60463.4 True False 53156.8822044644 46057.96440429535 46892.413897549304 46825.55973841702 57307.08821106154 58086.71031679616 55303.39143519843 56103.2450457319 56746.39763663767 48044.241164193816 45448.66907505275 1.1696026151323047 1.0134062304054807 1.0317664928782049 1.0302955112082712 1.2609189526854154 1.2780728566742687 1.216831924029983 1.234430978673643 1.2485821651438933 1.0571099691578385 1.0 15.471950426511507 -6.725831392482481 24.971485773939072 1.157203501286016 1.0557417489797836 0.262692413884167 0.09241537073841102 281.86679047472245 197668.795856291 0.017097417284658706 0.035590138675530784 1.880046571551273e-07 6.725831392482481 -0.10146175230623244 LYNSEESRPYT(ph)NK ddPTM_A549_PD325901_60min_R1 4 LYNSEESRPYTNK 13 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 LYNSEESRPYT(1)NK;LYNSEES(0.018)RPYT(0.981)NK;LYNSEES(0.01)RPYT(0.99)NK;LYNSEES(0.001)RPYT(0.999)NK 168.5 5.2783e-21 999534000.0 36994.5 38605.8 40684.5 40713.8 44770.4 39319.5 39374.5 43662.8 44083.8 46216.4 43607.8 True False 40750.1544060885 41859.24625306687 43445.59482577303 43228.598958251416 41625.881553495274 38999.29502833869 40872.91814405312 42791.91120119604 42231.111191544034 43298.28861665984 38244.317052620085 1.065521822497723 1.0945219964438908 1.1360013244842768 1.1303273869101518 1.0884200519575893 1.0197409192764466 1.0687318089068334 1.118909017052624 1.1042454002626991 1.1321496094984786 1.0 15.222957764763278 -10.746672572100838 0.8284084800800893 0.9952726243361965 1.092894213967049 0.0 0.04995822740804482 0.468836234079242 0.5268211655072268 0.02984479787340767 0.00634242338504529 1.7919563556088078e-11 10.746672572100838 0.09762158963085255 LYPTTQPPEQGLDPT(ph)RSSLPR ddPTM_A549_MK2206_60min_R1 1 LYPTTQPPEQGLDPTRSSLPR 21 1 P85299-2;P85299-4;P85299-3;P85299;P85299-5 P85299-2 PRR5 Proline-rich protein 5 1 LYPTTQPPEQGLDPT(0.403)RS(0.299)S(0.299)LPR 74.876 0.00011279999999999999 3721900.0 1321.0 2027.8 1729.8 2001.4 2208.4 1994.5 1927.7 1500.7 2901.4 2528.2 3139.2 True False 1543.952504650805 2131.0063585659113 1975.1116508076618 2491.7430898462612 1883.54728544979 2205.5566661580506 2277.9381374470327 1713.4288207009997 2244.237532583732 1957.0778640888436 2359.6500024875477 0.6543142004208959 0.9031027297774671 0.8370358522346514 1.055979949238006 0.7982316375157972 0.934696528651685 0.9653711927809742 0.7261368503357276 0.9510891573826001 0.8293932837605952 1.0 11.20435717089262 -2.0000000000000004 0.1438864417647671 1.0149007871371807 0.21575488029487574 0.04278599705106523 0.11305571550992101 65.48483894255376 0.5955706215412436 0.19956943862958776 10.913833719723844 0.00999999999999999 2.0000000000000004 -0.7991459068423049 LYPTTQPPEQGLDPTRS(ph)SLPR ddPTM_A549_MK2206_60min_R1 1 LYPTTQPPEQGLDPTRSSLPR 21 1 P85299-2;P85299-4;P85299-3;P85299;P85299-5 P85299-2 PRR5 Proline-rich protein 5 1 LYPTTQPPEQGLDPT(0.021)RS(0.489)S(0.489)LPR 91.238 6.8565e-07 5904700.0 1538.7 1812.6 1473.3 1205.7 1878.6 1639.4 1151.9 1248.4 2365.2 2031.1 2130.1 True False 1798.3949423968145 1904.8535977594292 1682.2360938460677 1501.0965541259304 1602.260428566371 1812.8802198543547 1361.18531956489 1425.3645230646553 1829.4859764482826 1572.273099339786 1601.1373822307364 1.1231983978109705 1.1896877925025704 1.0506506890135454 0.9375188979939828 1.0007014053560288 1.1322452651305999 0.8501364933897549 0.8902200016583268 1.1426164904721707 0.981972638193772 1.0 10.644881385245583 -5.838269647914466 6.19252452639205 1.0322778923119513 1.1557951529690336 0.251599529019669 0.09116969577235859 0.242119033674711 14.994082294887095 0.014000717940438338 0.044964843327223426 1.4512102998096904e-06 5.838269647914466 0.12351726065708224 LYPTTQPPEQGLDPTRS(ph)SLPR ddPTM_A549_PD325901_60min_R1 2 LYPTTQPPEQGLDPTRSSLPR 21 1 P85299-2;P85299-4;P85299-3;P85299;P85299-5 P85299-2 PRR5 Proline-rich protein 5 1 LYPTTQPPEQGLDPT(0.019)RS(0.592)S(0.388)LPR;LYPTTQPPEQGLDPT(0.101)RS(0.525)S(0.374)LPR 129.9 5.3649e-18 12863400.0 4896.4 4859.8 5860.6 5600.700000000001 6348.9 6181.0 5299.4 6362.9 5443.5 5677.8 6931.9 True False 5393.478923460833 5269.352401469584 6258.335558650729 5946.642518887424 5902.975166515956 6130.663985304015 5501.071566942951 6235.986967901513 5214.728625281167 5319.302739020593 6079.320244934561 0.8871845380994384 0.866766708968842 1.0294466003605136 0.9781755655728636 0.9709926321835833 1.0084456383774543 0.9048826752508357 1.0257704343010208 0.857781530694358 0.8749831436257643 1.0 12.569694303382448 -5.11982381589563 0.0022167710683299465 1.8715505764422546 6.291209554717259e-05 0.0 0.06505358265691426 802690.6539974444 251.5919565932489 104329.38860989448 108101.80278018936 7.5888537636961065e-06 5.11982381589563 -1.8714876643467075 LYRS(ph)DSDSSTLPR ddPTM_A549_PD325901_60min_R1 1 LYRSDSDSSTLPR 13 1 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 LYRS(0.526)DS(0.336)DS(0.11)S(0.023)T(0.005)LPR 85.493 8.2443e-05 5296000.0 1556.8 1533.7 1707.1 1348.3 1575.8 1888.8 1558.2 1559.8 1557.1 1835.5 1760.4 True False 1714.8451899444126 1662.9502815206176 1822.954071626225 1431.5814287885269 1465.12124421488 1873.418239029643 1617.4981536797563 1528.6885653605716 1491.6605019611097 1719.60621675161 1543.8819600950385 1.1107359463147364 1.0771226845724977 1.1807600054566396 0.927260934314176 0.9489852735404007 1.213446550612146 1.047682527218717 0.9901589660821404 0.9661752261612577 1.1138197486586048 1.0 10.592346737983458 -8.205814239147614 4.439584535466412 0.9838992583553361 1.0727320760885461 0.03860251465654918 0.08900024166842731 0.26398058940796376 11.017673040071928 0.012935997875729835 0.016675131134977594 6.225665187096556e-09 8.205814239147614 0.08883281773321006 LYS(ph)EVAEER ddPTM_A549_MK2206_60min_R1 2 LYSEVAEER 9 0 Q9UPN4-2;Q9UPN4;I3L2X7 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 LYS(1)EVAEER;LYS(1)EVAEER 108.7 0.00043359 6933200.0 1691.3899999999999 2101.94 1387.73 1292.0900000000001 2125.87 1948.26 1518.8200000000002 1932.11 2490.3999999999996 2431.9 2265.2 True False 1976.8552814847274 2208.919767888368 1584.5309811396212 1608.6521080041252 1813.157339122961 2154.4235800496785 1794.7699340754814 2205.992509338715 1926.3283763515985 1882.5321009720974 1702.688323660422 1.161020049303506 1.2973130414964347 0.930605419160456 0.9447719148891921 1.0648791760226874 1.2653070735917897 1.054080132655813 1.2955938433854381 1.131345267118763 1.1056234278538124 1.0 10.733598659160965 -10.543521842750643 1.0348355481322795 1.0055518331337765 1.1244810399620164 0.027807355351602947 0.12376880327082766 0.8382878158723294 1.7030716459462285 0.06486495758461293 0.021910861856114145 2.86073847676222e-11 10.543521842750643 0.11892920682823993 LYS(ph)EVAEER ddPTM_A549_PD325901_60min_R1 1 LYSEVAEER 9 0 Q9UPN4-2;Q9UPN4;I3L2X7 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 LYS(1)EVAEER 94.616 0.00094307 3823700.0 1172.7 1082.9 1148.2 1134.4 1205.4 1164.0 895.36 1195.7 1162.9 1436.4 1583.4 True False 1291.7516407038886 1174.1597834378806 1226.1237566875009 1204.4693115906746 1120.736862404249 1154.5207699229693 929.4334147597917 1171.8508254914968 1114.0273570936843 1345.7054588624421 1388.6518379995928 0.930219948122279 0.8455393578921148 0.882959805428105 0.8673659434504185 0.8070682886350506 0.8313968543663914 0.6693062935765648 0.843876624380949 0.8022366201585015 0.9690733285608748 1.0 10.439469217636336 -10.72152529494787 0.9445256846412099 1.0014029897216332 0.8282958802476829 0.4707347836131571 0.06234674366655268 0.38263619727673376 0.5987163989349059 0.045198323053079734 0.011332373587060686 1.8987802467608775e-11 10.72152529494787 -0.17310710947395036 LYS(ph)EVAEERER ddPTM_A549_MK2206_60min_R1 1 LYSEVAEERER 11 1 Q9UPN4-2;Q9UPN4;I3L2X7 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 LYS(1)EVAEERER 77.185 0.00032459 2993700.0 622.53 438.17 407.68 295.2 574.04 564.46 362.08 324.59 623.56 747.89 576.9 True False 727.5978446027749 460.4709814246105 465.4951542382167 367.5240132520317 489.59947642618954 624.1907825417766 427.8652491605652 370.60162651518476 482.32465562070485 578.9411295678365 433.639808369988 1.6778852645880185 1.0618743310386527 1.0734603817577772 0.8475329205441736 1.1290464274176044 1.439422235905998 0.9866835122192107 0.8546300855270693 1.1122702443618326 1.3350737602805027 1.0 8.760353392734435 -5.2613461206670795 7.358801065537216 1.0549142764946158 1.6853227415895167 0.4890120535357554 0.17221996119431837 0.054212117785632195 26.220450285050536 0.020205576230421428 0.16856633923270634 5.478401774503211e-06 5.2613461206670795 0.6304084650949009 LYS(ph)PTSK ddPTM_A549_MK2206_60min_R1 1 LYSPTSK 7 0 Q9P2M4 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 LY(0.048)S(0.797)PT(0.133)S(0.022)K 68.22399999999999 0.022930000000000002 3754400.0 2126.1 2330.9 1822.7 1700.6 2623.1 2317.8 1845.7 2344.6 3476.1 3504.6 3416.3 True False 2484.933701845627 2449.5328539211378 2081.186267734493 2117.247076342836 2237.245464799558 2563.06805756888 2181.039798872225 2676.95423003636 2688.768900191052 2712.908425949593 2567.9384249166064 0.9676765134764963 0.9538908060074245 0.8104502224589281 0.824492930126077 0.8712223950121437 0.9981033940298296 0.8493349286375721 1.042452655430511 1.0470534940020493 1.0564538462551705 1.0 11.326394894002172 -8.26916245886432 24.927559012860744 1.0243580236582206 0.8955258963376004 0.5739806745561904 0.05768889546898789 343.7873378032047 1109630.5592272454 0.009711538152678072 0.011853257050988164 5.38068466710031e-09 8.26916245886432 -0.12883212732062022 LYS(ph)PTSK ddPTM_A549_PD325901_60min_R1 2 LYSPTSK 7 0 Q9P2M4 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 LY(0.001)S(0.447)PT(0.447)S(0.105)K;LYS(0.807)PT(0.192)SK 84.743 0.013918 10302200.0 5916.7 5480.7 5495.200000000001 6377.8 7088.3 7303.1 6196.3 6630.1 7180.4 6564.8 7976.7 True False 6517.359028355672 5942.57782351832 5868.1373173220245 6771.74222096527 6590.442261307484 7243.625974935091 6432.10358724546 6497.857454287173 6878.63275851362 6150.297407644227 6995.6164684674495 0.9316346969180616 0.8494716441795126 0.8388306225437734 0.9679979243414376 0.9420817008785034 1.0354521302855206 0.9194477164718781 0.928847012064782 0.9832775695349893 0.8791644646853533 1.0 12.77223548098176 -6.34723878599012 5.404247126893306 0.9809223159205446 0.8712589776870474 0.2857046777643528 0.04951135123445521 0.11111328850863604 5.3297756693167715 0.005543047952749557 0.013149069026082752 4.495326226304903e-07 6.34723878599012 -0.10966333823349717 LYS(ph)SGSSTPTGLAGGSR ddPTM_A549_MK2206_60min_R1 2 LYSSGSSTPTGLAGGSR 17 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LYS(0.25)S(0.25)GS(0.25)S(0.25)TPTGLAGGSR;LYS(0.432)S(0.432)GS(0.126)S(0.011)TPTGLAGGSR 256.62 2.5450999999999997e-86 30972000.0 12011.3 11481.7 9249.2 9553.8 13561.0 10286.2 8183.900000000001 10401.7 14769.4 14636.0 14256.6 True False 14038.513791909305 12066.069487694165 10560.875639178066 11894.48142888637 11566.194864148074 11374.678856573042 9670.808695882539 11876.172828870258 11424.154481885364 11329.717434856542 10716.29275785678 1.3100158897410485 1.1259555669424746 0.9854971189953011 1.1099436808653615 1.0793093400390894 1.061437860423658 0.9024397629294205 1.1082351982371048 1.066054720603784 1.0572422470028193 1.0 13.38751827929319 -5.3479732702426706 2.7249058818473046 1.0365432604543643 1.3372083566754145 0.6455233912594047 0.05792837800092118 0.1611924004443844 1.766114825268098 0.007814578392890155 0.09814721681371763 4.487730099582762e-06 5.3479732702426706 0.3006650962210502 LYS(ph)SGSSTPTGLAGGSR ddPTM_A549_PD325901_60min_R1 2 LYSSGSSTPTGLAGGSR 17 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LYS(0.49)S(0.49)GS(0.019)STPTGLAGGSR;LYS(0.5)S(0.5)GSSTPTGLAGGSR 186.72 2.3451e-39 18586800.0 7078.4 6623.1 6841.7 6852.9 8482.0 7687.299999999999 6780.0 8353.6 9687.1 14678.7 15797.2 True False 7796.993957157329 7181.251880771469 7306.018904484298 7276.188068934877 7886.253581311467 7624.697177516187 7038.016610158355 8186.98089472758 9279.984874797685 13751.88437691739 13854.244546701511 0.5627873776065023 0.5183430865944414 0.5273487760271817 0.5251955849636875 0.5692301413279922 0.550350988234253 0.5080043582624649 0.5909366524554944 0.6698297293306484 0.9926116383005169 1.0 13.758040424295745 -10.032952765343463 0.48069690858401093 1.0357611795655381 0.523187142663827 0.9774283711037554 0.02619006370563152 0.12259990710628202 0.053208776078423184 0.02768226009833349 0.008481997127553206 9.269306325560715e-11 10.032952765343463 -0.5125740369017111 down LYSGS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 LYSGSPTR 8 0 H3BMH3;Q6PJI9-3;Q6PJI9;Q6PJI9-4 H3BMH3 WDR59 WD repeat-containing protein 59 1 LYSGS(1)PTR;LYSGS(0.554)PT(0.446)R 165.15 8.6436e-05 77066000.0 9617.9 9879.7 9615.8 9836.2 14449.9 13197.900000000001 11798.1 12459.6 18132.7 18641.4 16981.7 True False 11241.16638492125 10382.534530389405 10979.46503170096 12246.069441563806 12324.33885166679 14594.49301794302 13941.662052919979 14225.786455924695 14025.672401971824 14430.294792985433 12764.675218922921 0.8806464866616305 0.8133802350879931 0.8601444880810217 0.959371800029012 0.9655035196975982 1.1433501258463274 1.0922065633328641 1.1144652105864596 1.098788035059407 1.1304866395341828 1.0 13.639869210203985 -6.6239033906564835 1.6321271121507985 1.0622057492235144 0.8451988874988327 0.8037747975989578 0.04999238369692336 0.1448956910936829 0.769708989826045 0.008348576414028587 0.022796648087298664 2.377369076492991e-07 6.6239033906564835 -0.21700686172468175 LYSGS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 LYSGSPTR 8 0 H3BMH3;Q6PJI9-3;Q6PJI9;Q6PJI9-4 H3BMH3 WDR59 WD repeat-containing protein 59 1 LYSGS(0.998)PT(0.002)R;LYS(0.019)GS(0.726)PT(0.254)R;LYSGS(1)PTR;LYSGS(1)PTR 182.4 1.7876000000000001e-09 150127000.0 18457.199999999997 17988.4 17718.1 18889.8 21377.4 19705.2 18961.800000000003 20003.8 20150.699999999997 19832.800000000003 19934.699999999997 True False 20330.961356527496 19504.345598295306 18920.556813590654 20056.580044151553 19875.92517202639 19544.727384438236 19683.4016752951 19604.80851632248 19303.836154946857 18580.55362331318 17482.858276474977 1.1629083205396076 1.1156268208465918 1.0822347532868954 1.147214015407297 1.136880758152203 1.1179366139882128 1.1258686288031736 1.1213731877414352 1.1041579042554042 1.0627869499071136 1.0 14.093653450211283 -10.379429254131479 0.5083084798364895 0.9846467231969821 1.1285263791630318 0.6272850163729482 0.026302343086949447 0.3306619911564576 0.1376156757555383 0.022433149192616277 0.004912338252548134 4.174175895774099e-11 10.379429254131479 0.14387965596604968 LYSILGTTLKDEGK ddPTM_A549_PD325901_60min_R1 2 LYSILGTTLKDEGK 14 1 O75083;O75083-3 O75083 WDR1 WD repeat-containing protein 1 0 ; 107.61 1.7103e-05 5792000.0 5714.1 5396.7 5768.8 5723.9 7120.4 7363.4 6503.3 6104.6 6756.9 6609.299999999999 6436.5 False True 6294.191225501909 5851.498848720298 6160.305458612483 6077.452303079917 6620.287668046467 7303.434911727492 6750.786640242305 5982.838964033945 6472.930990752695 6191.987670049808 5644.851304335215 1.115032245520445 1.0366081466532837 1.0913140358332205 1.0766363851626113 1.172801073247425 1.2938223733401966 1.1959193035001183 1.0598753875835767 1.1466964569609688 1.0969266214850328 1.0 12.462719862945816 -10.706658256440049 0.8034224994951558 0.9936494672586574 1.1333551024132469 0.11288348638944168 0.07383627035993354 0.7301394028978765 0.7749308918015195 0.06474030384824855 0.014085110053550618 1.964905840542307e-11 10.706658256440049 0.13970563515458945 LYSILQGDS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 LYSILQGDSPTK 12 0 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.905)PT(0.095)K 159.12 6.678099999999999e-14 4339300.0 2745.0 2734.2 3146.4 2336.5 4636.4 3977.9 3678.5 3585.3 5080.6 4274.4 3543.7 True False 3208.288891193381 2873.359101287559 3592.6068320622185 2908.9426048894697 3954.3917018019397 4398.838737683687 4346.835834724758 4093.527254520753 3929.8522120510515 3308.810071300272 2663.7014888554827 1.2044476096951435 1.0787091246182245 1.348727268086583 1.0920677925285691 1.4845476185475386 1.65140078799661 1.6318779911755315 1.536781531882398 1.4753350660698838 1.2421850140279698 1.0 11.379216698648511 -3.9881103425297413 16.333881649139748 1.3009679881089997 1.2374296670321767 0.0 0.22374712952494394 0.0 0.0 0.03562359590139201 0.0 0.00010277551400536788 3.9881103425297413 -0.063538321076823 LYSILQGDS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 LYSILQGDSPTK 12 0 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.909)PT(0.091)K 163.33 3.3763e-14 8809800.0 4144.2 3583.2 3869.8 3793.0 4457.2 4062.0 3934.4 4331.2 3955.8 4524.1 4818.6 True False 4564.916133201203 3885.1688392414953 4132.427898997811 4027.284995471993 4144.141648505245 4028.9204187518067 4084.1257449862896 4244.810818239333 3789.551482665056 4238.447553912264 4225.9427476221035 1.0802124888629492 0.9193614469641459 0.9778712457292725 0.9529909030921223 0.9806431123178639 0.953377899172638 0.966441333660847 1.0044648192708825 0.8967351686904418 1.0029590571943259 1.0 12.045057506672002 -5.250227845210331 24.368370810453793 0.9569136662924679 1.0802125920264538 0.475467580176128 0.033561772202767105 810.3743799612233 1761309.1284380683 0.005296600168974308 0.10767991704879004 5.620463797582443e-06 5.250227845210331 0.12329892573398593 LYSILQGDS(ph)PTKWR ddPTM_A549_MK2206_60min_R1 1 LYSILQGDSPTKWR 14 1 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYS(0.011)ILQGDS(0.945)PT(0.044)KWR 62.203 0.0017256 8577200.0 1178.4 1013.2 665.71 849.44 1597.3 1335.4 1029.2 1052.0 1722.4 1868.8 1802.2 True False 1377.2851108860766 1064.767552272898 760.117688206249 1057.5528381328106 1362.3392859305154 1476.7111416332227 1216.1923178194145 1201.1242216148812 1332.279150107611 1446.6367820620312 1354.6640018103526 1.0166986862022565 0.7860012156888783 0.5611116019842848 0.7806753827661419 1.0056658212736926 1.090094030445755 0.8977815282565369 0.8866584038622985 0.983475716729147 1.067893426066366 1.0 10.403719348025342 -6.755520313426951 21.556311822994605 0.9849557190393115 0.7700406100356175 0.42688611560074363 0.11310141808957734 17.667847458521535 64338.5468111429 0.015544743203268669 0.03159644420305552 1.755818766675353e-07 6.755520313426951 -0.21491510900369393 LYSILQGDS(ph)PTKWR ddPTM_A549_PD325901_60min_R1 1 LYSILQGDSPTKWR 14 1 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.88)PT(0.12)KWR 123.63 3.3250999999999995e-07 13424000.0 4898.7 4217.0 4309.2 4771.4 4286.6 5794.0 4310.4 3539.8 5670.8 4904.5 6348.4 True False 5396.0124177676635 4572.3813895627845 4601.6482253246595 5066.1185413643725 3985.524003967194 5746.815584994578 4474.434630741383 3469.195912080619 5432.47599673821 4594.829032992791 5567.5870458233 0.9691833056863747 0.8212500948670214 0.826506741152207 0.9099307293569626 0.715844040005995 1.032191421112263 0.8036577774025142 0.6231058236769096 0.9757325663751502 0.8252819390474992 1.0 12.442836493507377 -8.959726643507198 24.999339353322853 0.9892940698016418 0.8379133577545277 0.06837270359862524 0.11669746355490597 128.28694318386894 79633.37723505712 0.01735487677467341 0.01845207665123289 1.0971685659159009e-09 8.959726643507198 -0.15138071204711412 LYSILQGDSPT(ph)K ddPTM_A549_MK2206_60min_R1 1 LYSILQGDSPTK 12 0 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.183)PT(0.817)K 121.56 1.3337000000000001e-05 3865900.0 1935.4 1725.3 2065.9 1629.7 3085.5 2390.3 1924.1 2286.5 3093.8 2846.9 2359.0 True False 2262.0482040129937 1813.1104006478772 2358.875684705484 2028.9765731600123 2631.627037337134 2643.239959447273 2273.684064046187 2610.6183771125734 2393.059239783399 2203.78331274208 1773.1951949121203 1.2756904657217396 1.0225103281636938 1.3302966822117912 1.1442488559532604 1.4841158180938774 1.490664968544691 1.2822525520992465 1.4722679063214785 1.3495746247507732 1.242831764413449 1.0 10.792135642800208 -10.648684672321833 0.9512190617559326 1.0025752932176313 1.3163429267130489 0.1339507526328988 0.15237342127006046 0.4417762773411302 0.7207680059402556 0.09206841684066826 0.025499336926947794 2.2455117280669705e-11 10.648684672321833 0.3137676334954176 LYSILQGDSPT(ph)K ddPTM_A549_PD325901_60min_R1 1 LYSILQGDSPTK 12 0 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.467)PT(0.533)K 134.61 4.513999999999999e-08 7426600.0 2655.7 3000.4 3242.8 2801.2 3393.2 3129.2 3005.5 3147.5 3273.7 3076.0 3396.8 True False 2925.3047089769884 3253.2542379047172 3462.8759085405213 2974.2237620132187 3154.8733379045116 3103.7168326829524 3119.8759471727044 3084.7206433340157 3136.1177735984115 2881.7808350465566 2979.0151340893153 0.981970408777817 1.0920569689885906 1.1624230669103741 0.9983916254666624 1.0590323297800084 1.0418600419872517 1.0472843563201468 1.0354833743659428 1.0527364355123099 0.9673602534172814 1.0 11.540619737494291 -14.999950722957117 0.17563023489809343 0.7687608530375164 1.068240059756392 0.24139363371943567 0.045692507636470016 66.03631603142897 0.7228689855452881 5.236103860974678 0.05311471807691188 1.0001134710217198e-15 14.999950722957117 0.2994792067188755 LYSILQGDSPT(ph)KWR ddPTM_A549_MK2206_60min_R1 1 LYSILQGDSPTKWR 14 1 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.178)PT(0.822)KWR 119.46 1.0323999999999998e-06 7218800.0 2567.5 2209.1 1989.0 1703.9 3252.9 2770.3 2315.6 2653.8 3963.3 3596.6 3673.3 True False 3000.8312306517314 2321.5337541709996 2271.070108368852 2121.355576490978 2774.4027190905745 3063.451307223691 2736.3145463881037 3029.9842769216452 3065.6188780895814 2784.1255620528177 2761.1182320774437 1.0868173610928387 0.8407947646719554 0.8225182398872201 0.7682958128507545 1.0048112706144914 1.1094966059887896 0.9910167969624836 1.097375781203657 1.1102816396902475 1.0083326131087345 1.0 11.431036950632167 -6.942225259426997 7.274436824999897 1.0556493287010549 0.8733723944579658 0.4822774245343605 0.08389462129524745 0.14121237875870923 14.768086597064453 0.012137023675692402 0.02300674818656057 1.1422857015059988e-07 6.942225259426997 -0.1822769342430891 LYSILQGDSPT(ph)KWR ddPTM_A549_PD325901_60min_R1 1 LYSILQGDSPTKWR 14 1 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.246)PT(0.754)KWR 120.39 9.0757e-07 15798000.0 4166.4 3769.6 3055.5 4134.2 3786.3 3847.1 3507.1 2670.4 4754.1 4102.5 5137.4 True False 4589.369860858429 4087.2774214123506 3262.8646042141245 4389.560144550565 3520.3633500258925 3815.7704931019407 3640.5646096587575 2617.1367771117275 4554.301709828086 3843.46744986297 4505.5323686618085 1.0186076772591295 0.90716858452541 0.7241906920720292 0.9742600397418323 0.7813423724378831 0.846907797099073 0.8080209643993844 0.580871817793431 1.0108243237814676 0.8530551187682448 1.0 12.13748186800408 LYSSEESRPYT(ph)NK ddPTM_A549_MK2206_60min_R1 5 LYSSEESRPYTNK 13 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YD28;A0A2R8YEB7;A0A087X209;A0A2R8Y644;Q9BVE2 Q14004 CDK13 Cyclin-dependent kinase 13 1 LYSSEES(0.003)RPYT(0.997)NK;LYSSEES(0.149)RPYT(0.851)NK;LYSSEES(0.001)RPYT(0.999)NK;LYS(0.012)S(0.008)EES(0.036)RPYT(0.943)NK;LYS(0.002)S(0.001)EES(0.03)RPYT(0.967)NK 139.67 1.49e-09 337959000.0 29395.3 28508.9 27444.700000000004 27280.299999999996 41362.6 30661.899999999998 27040.8 29027.5 45393.6 38115.600000000006 39413.3 True False 34356.50799391507 29959.881238642727 31336.771142861075 33963.97472465919 35278.21633270489 33906.521906278016 31953.76333821536 33142.23701799047 35112.02207868374 29505.259487566145 29625.889858257673 1.159678516267042 1.0112736320152071 1.0577495323444783 1.1464288460922754 1.1907900995207317 1.1444895687015861 1.0785756475533792 1.118691697584661 1.1851803353983275 0.9959282110590206 1.0 14.854570867731313 -4.913985776688377 19.457695364398226 1.098256361337238 4.056874293352294 0.069142551593386 0.06789929874093299 851.3070411419202 193531.9841928692 0.010455654677256464 546.9588818253185 1.2190295219576714e-05 4.913985776688377 2.958617932015056 LYSSEESRPYT(ph)NK ddPTM_A549_PD325901_60min_R1 3 LYSSEESRPYTNK 13 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YD28;A0A2R8YEB7;A0A087X209;A0A2R8Y644;Q9BVE2 Q14004 CDK13 Cyclin-dependent kinase 13 1 LYSSEESRPYT(1)NK;LYSSEES(0.008)RPYT(0.992)NK;LYSSEESRPYT(1)NK 166.77 5.4773e-20 488804800.0 31810.3 33660.5 36657.4 36378.2 39542.4 32225.8 34700.2 35264.0 37938.2 39649.3 39286.0 True False 35039.65823849485 36497.18846653502 39145.19160285349 38625.198793113406 36765.07823787438 31963.363769229927 36020.73509967805 34560.63185592718 36343.78938764432 37145.83643140815 34454.07105447266 1.0169961681188955 1.0592997387400793 1.1361557692547875 1.121063421853577 1.067075010664138 0.9277093472842478 1.0454710865002994 1.0030928362946152 1.0548474614272425 1.0781261921901695 1.0 15.072386839782196 -7.0157830224406075 24.814832754311983 1.0191884474662347 1.0865087096966475 0.30979550468351347 0.04638070849142588 564.6151669385753 887715.4771539248 0.0065138599359573545 0.01150695252414149 9.643106818722295e-08 7.0157830224406075 0.06732026223041276 LYSSGSST(ph)PTGLAGGSR ddPTM_A549_PD325901_60min_R1 2 LYSSGSSTPTGLAGGSR 17 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LYSSGS(0.006)S(0.044)T(0.936)PT(0.014)GLAGGSR;LYSSGS(0.007)S(0.049)T(0.928)PT(0.016)GLAGGSR 195.6 5.350999999999999e-48 31771000.0 12466.5 13072.7 13929.6 12954.9 14048.5 14063.3 12991.8 13032.0 14940.0 13700.900000000001 13904.8 True False 13732.089902647756 14174.382307644635 14874.946421489467 13755.094750287402 13061.78182469395 13948.773147472259 13486.21005838575 12772.066536593777 14312.123755249491 12835.822835789779 12194.597749789531 1.1260797760126824 1.162349312250933 1.2197980389919951 1.1279662546085052 1.0711121508636383 1.143848565871146 1.1059167620857777 1.0473544760272402 1.173644596476871 1.0525827172947393 1.0 13.573954549823357 -10.924806800145314 0.9584422002048603 0.9925426823372259 1.1335357446125873 0.407603859497939 0.04720977681897664 0.41514849175744545 0.6148877737927353 0.04355132097927989 0.00827372162827991 1.1890310610941577e-11 10.924806800145314 0.14099306227536146 MAAADS(ph)VQQR ddPTM_A549_MK2206_60min_R1 1 MAAADSVQQR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 MAAADS(1)VQQR 57.225 0.004832199999999999 5262100.0 538.21 754.1 582.62 341.48 501.4 540.27 412.64 611.3 769.61 850.15 834.11 True False 629.046690028849 792.480468978476 665.244276791282 425.1426153296199 427.6447242005638 597.4410127977993 487.6113467013246 697.953647027735 595.2945638146296 658.100524545182 626.97746673512 1.0033003152481765 1.2639696177682194 1.061033788431712 0.6780827667435623 0.682073514423815 0.9528907249392442 0.7777174979516871 1.1132037179297871 0.9494672382957018 1.049639834701126 1.0 9.29226978397642 -6.00857511586728 24.923081812346965 0.930470981037943 1.1408516858710702 0.27934057761749775 0.14650578624767716 401.8673543149639 1168017.2721113407 0.020311404784999532 0.05902947343286889 9.80448720582134e-07 6.00857511586728 0.2103807048331272 MAAADS(ph)VQQR ddPTM_A549_PD325901_60min_R1 2 MAAADSVQQR 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 MAAADS(1)VQQR;MAAADS(1)VQQR 59.198 0.0034336999999999996 11126100.0 743.1300000000001 734.52 870.5799999999999 964.9100000000001 1066.21 911.59 723.1800000000001 974.53 1103.63 911.04 1071.66 True False 818.5720105366083 796.4205781981642 929.6627940228211 1024.5102992303925 991.3230878248168 904.1663132767017 750.701010639281 955.0922346460045 1057.248269076706 853.516778920941 939.8526138124574 0.8709578486100269 0.8473887995773406 0.989158066233064 1.0900754907458587 1.0547644101382794 0.9620298970165159 0.7987433344406055 1.0162149049857172 1.1249085798549199 0.9081389638942428 1.0 9.876290723167765 -8.51541436219225 24.674539843330358 1.059593935055923 0.9499188735120662 0.0409041351514805 0.09661554852365561 345.8977807763888 1143415.4644850225 0.016130013758325526 0.018678003192666798 3.052007790157318e-09 8.51541436219225 -0.10967506154385676 MAAAGGTVSGPS(ph)SACKPGR ddPTM_A549_MK2206_60min_R1 3 MAAAGGTVSGPSSACKPGR 19 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 MAAAGGT(0.002)VS(0.023)GPS(0.488)S(0.488)ACKPGR;MAAAGGTVS(0.002)GPS(0.569)S(0.429)ACKPGR;MAAAGGTVSGPS(0.607)S(0.393)ACKPGR 105.79 4.2416e-10 12730800.0 3836.6000000000004 3774.43 3043.19 3028.73 4144.5 3308.31 3243.85 3525.76 4529.36 4797.9 4910.6 True False 4484.12428413571 3966.5323651059934 3474.760102105081 3770.7689859648544 3534.849540185953 3658.3931683215555 3833.215555925485 4025.547277187151 3503.4671919016523 3714.051057713733 3691.162494334657 1.2148271150398071 1.0746024785400223 0.9413728350995875 1.0215667805880615 0.9576521070560781 0.991122220692425 1.0384846404916763 1.090590642748923 0.9491500840938087 1.0062009091754174 1.0 11.849859534738323 -5.394791721192208 2.847724936082953 0.9885199151614229 1.2262658423854749 0.6819345134737327 0.04247325939488846 0.1340895654758043 1.7080103065882213 0.006132460338783863 0.06222870476721427 4.029102155503018e-06 5.394791721192208 0.23774592722405197 MAAAGGTVSGPS(ph)SACKPGR ddPTM_A549_PD325901_60min_R1 1 MAAAGGTVSGPSSACKPGR 19 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 MAAAGGTVS(0.003)GPS(0.499)S(0.499)ACKPGR 64.203 0.00061733 3962800.0 2164.3 2230.1 2863.0 2448.5 2590.1 2868.5 2806.9 2621.4 2502.0 2567.0 2670.8 True False 2384.0181427265493 2418.0383535366304 3057.3003966175866 2599.738284053037 2408.1803113599185 2845.139887048145 2913.7181154946175 2569.1141205514814 2396.8496409393742 2404.9191819130383 2342.3085315961325 1.0178070525585263 1.032331275286306 1.3052509331613258 1.1099042884335493 1.0281225888371326 1.214673408165134 1.2439514590800325 1.0968299376004047 1.0232851943317969 1.0267303173225606 1.0 11.193715406481893 -8.692722031417054 3.6139842921895897 1.0103382132792063 1.1381978300857398 0.2596304432225831 0.08754244403451383 0.21431893629428447 5.573879112075312 0.015305416505340296 0.017098564456786043 2.0289809457928896e-09 8.692722031417054 0.12785961680653357 MAAAGGTVSGPSS(ph)ACKPGR ddPTM_A549_PD325901_60min_R1 2 MAAAGGTVSGPSSACKPGR 19 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 MAAAGGTVSGPS(0.192)S(0.808)ACKPGR;MAAAGGTVSGPS(0.179)S(0.821)ACKPGR 107.78 2.5856e-10 15581700.0 3166.7 3433.0 3679.2 2947.9 3944.5 3711.0 3939.8 4326.2 2589.2 3586.3 4216.4 True False 3488.181052798673 3722.310958114546 3928.8926368269044 3129.9850878333464 3667.4519277862623 3680.77884637813 4089.7312449412825 4239.910547161755 2480.3849281855414 3359.860405958213 3697.8095299617794 0.9433100933229319 1.0066259302850085 1.0624918901292122 0.8464430259245121 0.9917903824062483 0.9953943859342519 1.1059875344589623 1.1466005787500848 0.6707714142894695 0.9086082932976108 1.0 11.852455199708002 -8.753475252365357 24.99951378119245 0.844530942524978 1.0101554697570212 0.292779446990427 0.10481449898755271 192.48336815876897 604207.5288202963 0.02324312542767521 0.026124556565093757 1.7641062866239831e-09 8.753475252365357 0.16562452723204324 MADGGS(ph)PFLGR ddPTM_A549_PD325901_60min_R1 1 MADGGSPFLGR 11 0 O60504-2;E5RIA0;E5RJP2;O60504 O60504-2 SORBS3 Vinexin 1 MADGGS(1)PFLGR 61.235 0.0028022 17152000.0 4087.3 4459.3 4575.4 4448.2 5092.4 4236.0 3770.0 3994.4 4344.5 4276.2 5201.6 True False 4502.2396870887715 4835.100860914708 4885.914158115303 4722.955211404827 4734.727391826278 4201.503420441325 3913.469413023159 3914.7285584538176 4161.915773405717 4006.2000022191437 4561.836175659141 0.9869358551522822 1.0599023451814515 1.0710411268570676 1.035318900009031 1.0378994794003438 0.9210114652646965 0.857871537321855 0.8581475545618815 0.9123334580958204 0.8781990075827935 1.0 12.155398922279268 -7.253767468136051 23.16559039211607 0.9385231871795959 1.041086433428573 0.6198658056592958 0.04824457396306042 162.54159011387782 490797.45122734335 0.008499262007224654 0.014524246241421155 5.574841596602968e-08 7.253767468136051 0.10256324624897706 MADHLEGLS(ph)S(ph)DDEETSTDITNFNLEKDR ddPTM_A549_PD325901_60min_R1 1 MADHLEGLSSDDEETSTDITNFNLEKDR 28 1 Q9Y5B6-2;Q9Y5B6 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 2 MADHLEGLS(0.881)S(0.881)DDEET(0.078)S(0.078)T(0.078)DIT(0.004)NFNLEKDR 47.236999999999995 0.0039196 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 MADT(ph)SSMDEDFESDYKK ddPTM_A549_MK2206_60min_R1 1 MADTSSMDEDFESDYKK 17 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 MADT(0.357)S(0.321)S(0.321)MDEDFESDYKK 75.122 0.00015194 9381500.0 2753.1 2671.6 3432.6 2713.0 3650.0 2990.7 2844.7 2429.1 4352.5 3902.2 4054.7 True False 3217.755973167397 2807.5730286737776 3919.3942956193655 3377.685121791198 3113.089835125761 3307.1738889340077 3361.5451676067737 2773.432363806757 3366.66569951427 3020.6903098043977 3047.8060859729453 1.0557613845502243 0.9211783655118995 1.2859723306078328 1.1082349160389402 1.0214199156085664 1.08509983760278 1.1029393185733711 0.9099766473238076 1.1046193899962424 0.991103181959855 1.0 11.573555400188628 MADTS(ph)SMDEDFESDYKK ddPTM_A549_MK2206_60min_R1 2 MADTSSMDEDFESDYKK 17 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 MADT(0.043)S(0.479)S(0.479)MDEDFESDYKK;MADT(0.05)S(0.553)S(0.398)MDEDFESDYKK 77.023 0.00010914 13439700.0 6332.8 7100.6 6274.799999999999 5772.6 9201.6 6654.1 6066.7 6680.5 10450.2 9643.5 9992.4 True False 7401.621817905081 7461.990210885254 7164.660993460471 7186.8872591418585 7848.056829285811 7358.232445365903 7168.94086136324 7627.48133317321 8083.246385540269 7465.0266522983775 7511.011303789689 0.9854361175266219 0.9934734364093286 0.9538876595546506 0.9568468170878277 1.044873521269508 0.9796593491549266 0.9544574720245919 1.0155065709094002 1.0761861563784172 0.9938777017326402 1.0 12.874791454017569 -8.514775752037743 24.572830193311383 1.036496247625287 0.9823074235973692 0.24768518039013376 0.03163879683997767 267.3634821645111 810797.7694002537 0.00592716217314119 0.006877133347882227 3.0564989290958034e-09 8.514775752037743 -0.054188824027917804 MADTS(ph)SMDEDFESDYKK ddPTM_A549_PD325901_60min_R1 3 MADTSSMDEDFESDYKK 17 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 MADT(0.287)S(0.382)S(0.331)MDEDFESDYKK;MADT(0.081)S(0.486)S(0.432)MDEDFES(0.001)DYKK;MADT(0.108)S(0.446)S(0.446)MDEDFESDYKK 66.335 0.00059078 27182500.0 13598.900000000001 14227.3 13447.8 13039.2 16412.6 15771.2 14402.1 15077.900000000001 16234.4 14677.0 17225.0 True False 14979.450317018933 15426.284501713682 14360.448576190698 13844.60176982821 15259.835596396193 15642.764576124695 14950.179796631513 14777.159456116275 15552.12462464675 13750.291715207517 15106.434198271445 0.9915940532632749 1.0211731173117502 0.9506180206202397 0.9164705309087686 1.0101547060088012 1.0355034398464873 0.9896564338354705 0.9782030135084527 1.0295033507262954 0.9102274921225881 1.0 13.882875538955291 -6.935533807552382 24.999999433687215 1.0110938989892975 0.9711238371981116 0.0 0.04167476705131015 61.21996966602069 23740.455887193144 0.00433149650325577 0.008185758884105757 1.1600219109988228e-07 6.935533807552382 -0.039970061791185896 MADTSS(ph)MDEDFESDYKK ddPTM_A549_MK2206_60min_R1 1 MADTSSMDEDFESDYKK 17 1 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 MADT(0.033)S(0.318)S(0.649)MDEDFESDYKK 97.45700000000001 4.5258999999999995e-07 8643600.0 2826.2 3217.4 3098.8 2641.3 4747.2 2684.7 2850.8 3051.1 4885.3 4729.7 5016.8 True False 3303.1934660439847 3381.151917373491 3538.2564363063857 3288.418618572464 4048.8931685778134 2968.793172040369 3368.753458647095 3483.6027686018674 3778.7873502210346 3661.2574850806914 3770.990103363768 0.8759485905564952 0.8966217955219409 0.9382831403217471 0.8720305618514235 1.073694986620663 0.7872715362981648 0.8933339431578267 0.9237899525364578 1.0020676922090863 0.9709008469194353 1.0 11.880727648918713 -8.708398070790546 4.229842010336273 1.001221255809963 0.9070814940229031 0.24461691097676164 0.06505676005750544 0.1827725030420504 6.736665580431376 0.010410651534373974 0.01162905940453359 1.9570500350082286e-09 8.708398070790546 -0.09413976178705985 MAEAPAS(ph)PAPLSPLEVELDPEFEPQSRPR ddPTM_A549_PD325901_60min_R1 1 MAEAPASPAPLSPLEVELDPEFEPQSRPR 29 1 O43524;A0A2Z4LIS9 O43524 FOXO3 Forkhead box protein O3 1 MAEAPAS(0.977)PAPLS(0.023)PLEVELDPEFEPQSRPR 40.937 0.017774 3678700.0 1083.5 984.34 1320.7 916.35 1593.2 1360.2 1615.6 1471.4 1625.8 1607.8 1695.7 True False 1193.4961223694577 1067.2937863415311 1410.3306440142667 972.9508583181538 1481.2991282416208 1349.1229821728734 1677.0825420902422 1442.0517727090296 1557.473279871795 1506.283233611136 1487.1396499279458 0.8025447525572225 0.7176822878693626 0.9483511814661114 0.6542431024317688 0.9960726474567415 0.9071932028967424 1.1277236419400825 0.9696814773104189 1.0472945697784717 1.0128727545419947 1.0 10.538324414768343 -6.863828786733911 7.729691429075618 1.017244524476156 0.7886831632333836 0.6320576872131747 0.08352916847334885 0.103462590325342 6.970406277298298 0.010865810574835369 0.020617155427138982 1.3682681358901757e-07 6.863828786733911 -0.2285613612427725 MAGNEALS(ph)PTSPFR ddPTM_A549_MK2206_60min_R1 3 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.871)PT(0.119)S(0.011)PFR;MAGNEALS(0.989)PT(0.01)S(0.001)PFR;MAGNEALS(0.997)PT(0.003)SPFR 176.43 6.5054e-23 87945000.0 16770.7 33092.8 18117.1 19499.199999999997 22864.8 16755.6 15786.4 16178.4 40273.1 22450.9 38117.9 True False 19601.18415575113 34777.08216922281 20686.37720479101 24276.504875352348 19501.418208817402 18528.666470532888 18654.58453752858 18471.737744272043 31151.307152925478 17379.226097172777 28652.173429478895 0.6841081080287047 1.2137676834470883 0.7219828281336506 0.8472831890084602 0.6806261401710383 0.6466757754394157 0.6510704880187462 0.6446888851114982 1.0872231815013147 0.6065587359349185 1.0 14.806356959264669 -8.771497518089019 24.995055910373107 1.0411887433980658 0.7677338439826216 0.0 0.20406614957781916 154.71799417480602 384482.01824972953 0.027648149904586243 0.029600506613558862 1.692397916143394e-09 8.771497518089019 -0.2734548994154442 MAGNEALS(ph)PTSPFR ddPTM_A549_PD325901_60min_R1 4 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.687)PT(0.299)S(0.014)PFR;MAGNEALS(0.486)PT(0.486)S(0.029)PFR;MAGNEALS(0.82)PT(0.166)S(0.014)PFR;MAGNEALS(0.979)PT(0.018)S(0.003)PFR 142.03 6.0997e-13 68003000.0 22401.6 29016.199999999997 24530.899999999998 25932.0 28992.4 26503.8 24439.6 27485.2 35514.0 34687.1 39356.100000000006 True False 24675.793940813684 31461.497006362744 26195.71439028515 27533.76074415495 26956.073842350204 26287.961840106873 25369.662351862284 26936.98612427771 34021.47008326174 32496.950586262497 34515.549198873196 0.7149181894408118 0.9115166276244518 0.7589540076372403 0.7977204878157879 0.7809834833290215 0.761626642202323 0.7350212568163484 0.7804304653844855 0.9856853178616788 0.9415162539938203 1.0 15.074958819654343 -8.767344900569682 7.447882877354494 0.9934786756312338 0.782120183346148 0.7502965372545536 0.04996439774513515 0.03708895637953106 12.31500072754767 0.007710645790784207 0.008410048408841075 1.7086578234570707e-09 8.767344900569682 -0.21135849228508585 MAGNEALSPT(ph)SPFR ddPTM_A549_MK2206_60min_R1 1 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.325)PT(0.539)S(0.136)PFR 114.69 4.4743e-06 19803000.0 3129.1 3728.4 3489.2 3085.5 4345.8 3072.4 3245.7 3234.1 4783.5 4843.6 4904.0 True False 3657.2155808499874 3918.1596347160203 3984.0210267071902 3841.4476385133576 3706.53857684645 3397.5193287059406 3835.401676978696 3692.543579015861 3700.0448876798414 3749.4273959737034 3686.201456485391 0.9921366544998763 1.0629260719927633 1.0807930802853503 1.0421154903931882 1.0055170941146687 0.9216857431186914 1.0404753300259286 1.0017205035062073 1.0037554733125327 1.017152057540717 1.0 11.847919203251527 -6.75875800589446 4.866674647931404 0.9987079048676519 1.048971076984906 0.2991234425635815 0.03373523398946649 0.16086182355788664 10.07134487493953 0.004545699642605627 0.009235900059446064 1.74277769957089e-07 6.75875800589446 0.05026317211725417 MAGNEALSPT(ph)SPFR ddPTM_A549_PD325901_60min_R1 1 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.127)PT(0.839)S(0.034)PFR 101.01 6.269e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 MALLQEFASRPLGAAPQAEHQGLPVPGS(ph)PGGQK ddPTM_A549_MK2206_60min_R1 1 MALLQEFASRPLGAAPQAEHQGLPVPGSPGGQK 33 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 MALLQEFASRPLGAAPQAEHQGLPVPGS(1)PGGQK 72.02199999999999 4.795e-05 6123700.0 905.8 940.51 1139.9 1366.9 1563.3 913.72 1081.2 1198.3 2197.6 1569.6 1656.5 True False 1058.6768953161989 988.3779417569908 1301.5549605478411 1701.7905613624735 1333.340640890987 1010.4092439217518 1277.6400447205126 1368.1626946398399 1699.8471088460788 1215.026269865456 1245.1453329257852 0.8502436360810739 0.7937852037195898 1.0453036494057342 1.366740505193626 1.0708313364175446 0.8114789633010459 1.026097123713561 1.0987975929082865 1.3651796813564376 0.9758108051615495 1.0 10.28209842764176 -8.378348182443245 3.8929404928468982 1.1744456764055395 0.9993653036441287 0.056953719127025626 0.178484122562658 0.3721642231211389 9.979853661776223 0.03386812462771898 0.04119900248088633 4.184579446198414e-09 8.378348182443245 -0.17508037276141086 MALPPQEDAT(ph)ASPPR ddPTM_A549_MK2206_60min_R1 3 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.64)AS(0.36)PPR;MALPPQEDAT(0.695)AS(0.305)PPR;MALPPQEDAT(0.914)AS(0.086)PPR 86.214 7.7316e-05 13771700.0 4359.4 4798.3 5055.5 5340.0 6566.1 5393.6 4285.6 5201.5 7696.0 7020.299999999999 7634.9 True False 5095.160142902885 5042.512974803636 5772.445918983775 6648.30023972171 5600.235388060076 5964.347172018082 5064.238046295068 5938.828553925667 5952.86828798663 5434.409354189898 5738.943617479671 0.88782195513893 0.8786482863231402 1.0058377122580648 1.1584536602646385 0.9758303550853649 1.0392761402729027 0.8824338386720536 1.0348295696506211 1.0372759665830114 0.9469354843699418 1.0 12.486569485311902 -5.779759752329854 6.501329323884901 1.017715200868354 0.8825062061070105 0.3521643506776829 0.06498250485012363 0.09714277582485925 15.708745996700381 0.008088035546801946 0.027253747752778737 1.660505229467264e-06 5.779759752329854 -0.13520899476134363 MALPPQEDAT(ph)ASPPR ddPTM_A549_PD325901_60min_R1 1 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.857)AS(0.143)PPR 83.69200000000001 0.00010071 6997200.0 3681.0 5014.5 4600.0 4797.5 6173.5 5979.3 4988.2 4902.7 6139.0 5296.6 6352.7 True False 4054.6924101910236 5437.089513389278 4912.183662047118 5093.830679086969 5739.89465741881 5930.606563230599 5178.028680647776 4804.911802406253 5880.999178947568 4962.171772076586 5571.358173083249 0.7277745002610582 0.9759001924624664 0.881685131244876 0.9142888539632319 1.0302505204475647 1.0644812950427378 0.9294015067392803 0.8624309644316339 1.0555772930486285 0.8906574694928413 1.0 12.443813352033464 -3.941120122306169 0.5065755436439578 1.011950708708948 5.247547990907541e-14 0.3138184225071893 0.07880232923384908 8.401006756155192 0.525509983426322 0.013418159236887453 6.858992843834146 0.00011451961457366029 3.941120122306169 -1.0119507087088957 MALPPQEDAT(ph)ASPPRQK ddPTM_A549_MK2206_60min_R1 2 MALPPQEDATASPPRQK 17 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.5)AS(0.5)PPRQK;MALPPQEDAT(0.572)AS(0.428)PPRQK 45.369 0.011206 16026800.0 4389.2 5668.9 4879.1 4616.5 5869.700000000001 4742.5 4999.4 4245.2 7202.700000000001 6561.2 7729.2 True False 5129.989654362839 5957.422796170383 5571.029746476853 5747.542707242563 5006.274905544576 5244.3482021832815 5907.726266718209 4846.97010037975 5571.299950348401 5079.020363048696 5809.826324932074 0.8829850269961067 1.0254046270892674 0.9588978112081494 0.9892796076498483 0.8616909741451018 0.9026686700905119 1.016850751866026 0.8342710830407514 0.958944319288845 0.8742120812205306 1.0 12.504279321974469 -9.702412227828157 1.3360658319444596 0.9912485047953494 0.9385394828526487 0.0 0.06879142406816774 0.56653301267066 2.049866026776813 0.015019211920781258 0.010669363683456855 1.9842106310278781e-10 9.702412227828157 -0.05270902194270077 MALPPQEDAT(ph)ASPPRQK ddPTM_A549_PD325901_60min_R1 1 MALPPQEDATASPPRQK 17 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.559)AS(0.441)PPRQK 59.512 0.0012465 5965400.0 838.39 1193.7 1342.2 1530.9 1331.8 1935.8 1425.8 1733.3 1667.0 1826.7 1825.5 True False 923.502735609903 1294.2972882905149 1433.2897633042696 1625.4602160738384 1238.2589624605762 1920.0354866124444 1480.0595992276974 1698.727971752455 1596.9417871486557 1711.3618502534266 1600.9750727979404 0.5768376730538006 0.8084431233701467 0.8952605119574936 1.0152938941348453 0.7734405010419905 1.1992913064267134 0.9244738561988193 1.0610583516354675 0.9974807317629025 1.0689497165390396 1.0 10.64473512991116 -4.800341477555412 0.7697830564065558 1.0029272757171754 2.1980205128277043e-19 0.6442165809967275 0.09688793311850678 1.9262605400648338 0.4998832282852589 0.013054363078416713 1.9602177709713704 1.5836475106451328e-05 4.800341477555412 -1.0029272757171754 MALPPQEDATAS(ph)PPR ddPTM_A549_MK2206_60min_R1 6 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.056)AS(0.944)PPR;MALPPQEDAT(0.002)AS(0.998)PPR;MALPPQEDAT(0.29)AS(0.71)PPR;MALPPQEDAT(0.47)AS(0.53)PPR;MALPPQEDAT(0.021)AS(0.979)PPR;MALPPQEDAT(0.018)AS(0.982)PPR 193.43 8.738299999999998e-35 186341000.0 61167.2 68832.9 63726.0 58439.5 85112.6 65053.6 62208.9 64673.6 97388.8 92093.9 96303.7 True False 71490.7279655387 72336.20060091325 72763.30504068038 72757.1801234488 72592.64928797938 71937.52877291534 73511.45188495543 73841.28085459328 75330.39229795647 71289.82402800859 72388.83344309383 0.9875933146752371 0.9992729149003077 1.0051730574976172 1.005088446143348 1.0028155702363373 0.9937655485146991 1.0155081714743215 1.0200645229715057 1.0406355333405815 0.984817970357967 1.0 16.143479546764674 -7.88019204648388 5.178985625635929 1.019698823897558 0.9997501276676913 0.08319932772956462 0.014453205212626951 0.21248308171742267 8.869997550285664 0.002368251302242896 0.0032994051373711098 1.3176739298523318e-08 7.88019204648388 -0.019948696229866614 MALPPQEDATAS(ph)PPR ddPTM_A549_PD325901_60min_R1 8 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDATAS(1)PPR;MALPPQEDAT(0.008)AS(0.992)PPR;MALPPQEDATAS(1)PPR;MALPPQEDATAS(1)PPR;MALPPQEDAT(0.028)AS(0.972)PPR;MALPPQEDAT(0.337)AS(0.663)PPR;MALPPQEDAT(0.001)AS(0.999)PPR;MALPPQEDAT(0.002)AS(0.998)PPR 226.08 7.725099999999999e-86 197967400.0 133648.5 141476.7 147804.9 136357.9 167907.3 141097.3 143706.8 156129.1 156145.9 166748.2 169243.2 True False 147216.3973331742 153399.4380215217 157835.82933706674 144780.41779174015 156114.070496739 139948.25036946085 149175.64091337819 153014.98261959045 149583.6308349941 156219.69019457398 148427.35932103873 0.9918413829269487 1.033498397621753 1.0633877073543976 0.9754294521846846 1.051787697435716 0.9428736791494207 1.005041399346875 1.030908205330454 1.007790150813466 1.052499289276453 1.0 17.17939752002586 -6.26870764692847 24.95773481464596 1.0033741971020007 1.0299680863642033 0.05943863571571506 0.033808458954343895 769.2177515385158 2641335.8851676146 0.0038979258104928464 0.009204635453744925 5.386322504018942e-07 6.26870764692847 0.02659388926220263 MALPPQEDATAS(ph)PPRQK ddPTM_A549_MK2206_60min_R1 6 MALPPQEDATASPPRQK 17 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.009)AS(0.991)PPRQK;MALPPQEDAT(0.005)AS(0.995)PPRQK;MALPPQEDAT(0.003)AS(0.997)PPRQK;MALPPQEDAT(0.001)AS(0.999)PPRQK;MALPPQEDAT(0.001)AS(0.999)PPRQK;MALPPQEDAT(0.001)AS(0.999)PPRQK 186.11 7.0578999999999995e-40 256103000.0 89920.0 102686.0 100392.0 84952.2 122758.0 94778.0 86876.0 81331.7 137583.0 139709.0 142564.0 True False 105096.29766707063 107912.27879263226 114629.09518319037 105765.49281364938 104700.46081653924 104807.34505145557 102660.24465884143 92860.71754288506 106420.67017490449 108148.63986788549 107161.424233765 0.9807288249343397 1.0070067616610743 1.0696861860769522 0.9869735641337642 0.977034987778276 0.9780324011262282 0.9579962695801376 0.8665498635060693 0.9930874933386046 1.0092124161392904 1.0 16.70942613506098 -6.492723696080007 24.79344360645501 0.981129672582289 1.0196609913699577 0.18204686390222868 0.04173087907794265 994.1778325119258 817411.5169640032 0.006186834779485322 0.014358080868058717 3.215705762706288e-07 6.492723696080007 0.03853131878766869 MALPPQEDATAS(ph)PPRQK ddPTM_A549_PD325901_60min_R1 7 MALPPQEDATASPPRQK 17 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.005)AS(0.995)PPRQK;MALPPQEDAT(0.002)AS(0.998)PPRQK;MALPPQEDAT(0.005)AS(0.995)PPRQK;MALPPQEDATAS(1)PPRQK;MALPPQEDAT(0.038)AS(0.962)PPRQK;MALPPQEDATAS(1)PPRQK;MALPPQEDAT(0.001)AS(0.999)PPRQK 221.86 5.347699999999999e-64 492452500.0 159953.0 164545.4 181601.3 183612.1 207495.0 216673.2 192546.2 201897.3 194543.8 207808.7 228291.5 True False 176191.31080882496 178412.21833013173 193925.85627532995 194953.40240366536 192921.26701888963 214908.6852969704 199873.6510063231 197870.29996613256 186367.80063028832 194687.62321714533 200213.09275905273 0.8800189257396024 0.8911116444559529 0.9685972760468309 0.9737295384487309 0.963579675835993 1.0733997579049595 0.9983045976261996 0.9882985035562104 0.9308472191405255 0.9724020568996602 1.0 17.611176795468527 -5.761759587617788 3.8235461298670046 0.9778958393573802 0.8817189493067472 0.5586844661433965 0.03385168841777497 0.14431156455265035 4.543158051605525 0.005526323091166366 0.02202522037158236 1.7307741986918957e-06 5.761759587617788 -0.09617689005063301 MANS(ph)SPVLSK ddPTM_A549_MK2206_60min_R1 3 MANSSPVLSK 10 0 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 MANS(0.654)S(0.344)PVLS(0.001)K;MANS(0.847)S(0.153)PVLSK;MANS(0.5)S(0.5)PVLSK 177.16 6.774800000000001e-11 94104000.0 18595.899999999998 20012.4 19311.9 18473.1 26853.800000000003 21775.7 19844.3 20799.8 29970.8 28647.3 28457.7 True False 21734.433293895458 21030.945680128447 22050.617810863976 22999.01032928896 22903.64159301377 24079.990120460196 23449.752441220193 23748.235346715963 23182.46165353296 22175.855033586085 21390.86769743562 1.0160613211824514 0.9831740337793627 1.0308426064225271 1.075178934047922 1.0707205484590747 1.1257135737110353 1.0962506417648217 1.1102043957554348 1.0837550856486349 1.0366973115468603 1.0 14.384707384604889 -5.995833433630841 4.648677946227484 1.0596264516476466 1.0002323097907055 0.36436010758625326 0.03549164624312814 0.22737274958301593 13.07029309268108 0.006611828772487914 0.020436938223243044 1.0096400423435708e-06 5.995833433630841 -0.05939414185694103 MANS(ph)SPVLSK ddPTM_A549_PD325901_60min_R1 5 MANSSPVLSK 10 0 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 MANS(0.615)S(0.384)PVLS(0.001)K;MANS(0.5)S(0.5)PVLSK;MANS(0.5)S(0.5)PVLSK;MANS(0.5)S(0.5)PVLSK;MANS(0.5)S(0.5)PVLSK 193.49 4.1492e-15 132884000.0 32102.4 32410.800000000003 32652.899999999998 33346.4 37572.0 36510.8 35894.9 36696.1 34240.7 34845.6 38272.8 True False 35361.41201546217 35142.17186171251 34868.92215183876 35406.13139283079 34933.07233636342 36213.46814991714 37260.900061942935 35964.16749796645 32801.68245424172 32645.442869212686 33565.488231268704 1.0535050696065977 1.0469733560727714 1.0388325625293842 1.054837371912481 1.040743757268536 1.0788899568629438 1.1100955780893926 1.0714626657646291 0.9772443120217915 0.9725895432917038 1.0 15.034691007028117 -8.76027783339325 24.999767212841064 0.9892542557794595 1.0618797887542053 0.745765559869525 0.0203675438041457 12.529967861767998 269681.4614948922 0.0038475655200242943 0.004246384322924485 1.7366894522158526e-09 8.76027783339325 0.07262553297474583 MANSS(ph)PVLSK ddPTM_A549_MK2206_60min_R1 3 MANSSPVLSK 10 0 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 MANS(0.026)S(0.974)PVLSK;MANS(0.11)S(0.89)PVLSK;MANS(0.466)S(0.534)PVLSK 172.21 1.5772999999999998e-10 63182700.0 11911.6 13562.500000000002 12009.0 12008.4 17139.800000000003 12259.2 12103.599999999999 13305.8 18162.1 17943.3 18108.7 True False 13921.986869340295 14252.773319878783 13712.056777979664 14950.458539077566 14618.558124955765 13556.460407001643 14302.667448463928 15191.937897303505 14048.413348913977 13889.896067836939 13611.810015305256 1.0227873334763173 1.0470887636436903 1.007364690115546 1.0983446376541488 1.0739613694665522 0.9959337069617209 1.0507542665069425 1.116085067321799 1.032075332605862 1.0204297629939736 1.0 13.732571299916689 -9.604915023156842 1.4134208614350585 1.0075595075752601 1.0502892040281926 0.15773991512841412 0.03478785058838585 0.4079950537790265 1.6566812662548938 0.008686354134360825 0.006548765916205446 2.4836190185784646e-10 9.604915023156842 0.04272969645293245 MANSS(ph)PVLSK ddPTM_A549_PD325901_60min_R1 3 MANSSPVLSK 10 0 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 MANS(0.234)S(0.765)PVLSK;MANS(0.365)S(0.634)PVLSK;MANS(0.139)S(0.86)PVLSK 119.16 2.1539e-05 174378000.0 21524.1 20484.5 21514.9 22306.3 25227.7 23714.800000000003 22419.0 23818.3 22480.699999999997 23335.6 25551.1 True False 23709.210786795044 22210.800705359008 22975.030493603826 23684.10948971707 23455.793382840293 23521.674531416873 23272.16731314752 23343.225321405112 21535.914357740116 21862.1862335216 22408.476681767985 1.0580465206760512 0.9911785178789145 1.0252830132044095 1.0569263509548137 1.046737523301815 1.0496775334378088 1.038543031891242 1.041714064410173 0.9610610602220094 0.9756212590438662 1.0 14.451756957966872 -8.750855507459221 24.999792501375843 0.9816121672776534 1.037755527843687 0.65119221636243 0.01939934532200584 107.75241936088352 254517.70764800915 0.003742382909630648 0.004221850626045274 1.774779863239376e-09 8.750855507459221 0.05614336056603353 MAPALSGANLT(ph)SPR ddPTM_A549_MK2206_60min_R1 1 MAPALSGANLTSPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALS(0.065)GANLT(0.752)S(0.183)PR 42.317 0.039311 3199400.0 2038.8 2531.8 2087.8 2151.2 3410.5 2087.7 2056.0 2322.3 3248.6 3493.8 3571.8 True False 2382.8995961257074 2660.657805807859 2383.8814340133185 2678.2440965710384 2908.8199678620304 2308.6190282968964 2429.548586704935 2651.4931367454756 2512.797286948203 2704.5481534505184 2684.823483334934 0.8875442318337465 0.9909991559307066 0.8879099310663797 0.9975494155184746 1.083430618779027 0.8598773970157852 0.9049192998293836 0.9875856469535729 0.9359264408053188 1.0073467288400964 1.0 11.390611524422651 -10.865690646927202 0.9907507821127113 1.0015036504956623 0.9495188730175039 0.10606904828010155 0.061318787180873635 1.2573189446281265 2.0828122196015917 0.048195190065313184 0.01037223506601511 1.3624148010151919e-11 10.865690646927202 -0.05198477747815833 MAPALSGANLT(ph)SPR ddPTM_A549_PD325901_60min_R1 2 MAPALSGANLTSPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALS(0.195)GANLT(0.569)S(0.236)PR;MAPALS(0.01)GANLT(0.577)S(0.413)PR 75.589 0.00089636 26223300.0 7860.9 9076.2 8022.200000000001 9838.1 9627.8 8399.0 7442.099999999999 9162.4 9372.0 9618.0 10636.0 True False 8658.932781111278 9841.083226926678 8566.634733407474 10445.777093053788 8951.576542106874 8330.601328679577 7725.313187973378 8979.64874423625 8978.127432007916 9010.717838581846 9327.839427159073 0.9282892194627411 1.0550227953402838 0.9183943184597213 1.1198495830277386 0.959662375409608 0.8930901302207322 0.8281996327552813 0.9626718828468439 0.9625087891057675 0.9660026749973963 1.0 13.187327238333943 -4.946623987668949 16.247281492773794 0.9727426253427746 0.6008694579911277 0.0155722131152356 0.07371138690230866 47068263.69939885 341713312.21137416 0.009896160310611277 562792181.354284 1.1307745159899453e-05 4.946623987668949 -0.3718731673516469 MAPALSGANLT(ph)SPRVPLSAYER ddPTM_A549_MK2206_60min_R1 1 MAPALSGANLTSPRVPLSAYER 22 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALS(0.077)GANLT(0.501)S(0.421)PRVPLS(0.001)AYER 55.358000000000004 0.0023846999999999996 7522500.0 1830.4 2578.1 2386.0 2256.4 2674.0 1647.4 1549.8 1921.2 3138.0 2905.5 2988.5 True False 2139.326771016527 2709.3142780445696 2724.3706780131115 2809.2181012936467 2280.6581422263816 1821.7267745443826 1831.3785990638648 2193.535983428242 2427.2480103562957 2249.1455320426135 2246.37297159596 0.9523470937671669 1.2060839016059333 1.212786439500985 1.250557292495292 1.0152624568866957 0.8109636278476575 0.8152602538494497 0.9764789779632279 1.0805187032818648 1.0012342386957602 1.0 11.13338176698635 -6.8566886352829615 7.708952730710892 0.9976951929240602 1.1627361953477449 0.4016975072098855 0.10952279796580096 0.23286739854170793 16.49985963843388 0.017629415507481302 0.033457427812563285 1.390949506382364e-07 6.8566886352829615 0.1650410024236847 MAPALSGANLTS(ph)PR ddPTM_A549_MK2206_60min_R1 5 MAPALSGANLTSPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALS(0.001)GANLT(0.086)S(0.913)PR;MAPALSGANLT(0.056)S(0.944)PR;MAPALSGANLT(0.006)S(0.994)PR;MAPALSGANLT(0.033)S(0.967)PR;MAPALSGANLT(0.018)S(0.982)PR 182.03 1.7939e-52 45232000.0 14223.4 15598.6 13148.999999999998 12778.599999999999 20451.7 17976.1 14925.7 16628.5 23052.6 21401.2 22210.9 True False 16623.962191256804 16392.502112992526 15013.72592003118 15909.357573653147 17443.282022203166 19878.31897043056 17637.50648860983 18985.64079764549 17831.22290743771 16566.65405622109 16695.3205403449 0.9957258473165786 0.9818620776629835 0.8992774881889761 0.9529231580314711 1.0448006661537756 1.1906521304813418 1.056434133503942 1.137183365348748 1.068037170316548 0.9922932606287563 1.0 14.0271561721135 -6.783053555072431 6.242119057482534 1.0558895094941083 0.9547856692808471 0.4504533510474048 0.058496981683784234 0.14022177788642676 18.505282203106116 0.009182505293550882 0.017955692961738694 1.6479591607275066e-07 6.783053555072431 -0.10110384021326124 MAPALSGANLTS(ph)PR ddPTM_A549_PD325901_60min_R1 5 MAPALSGANLTSPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALS(0.237)GANLT(0.19)S(0.574)PR;MAPALS(0.001)GANLT(0.439)S(0.56)PR;MAPALS(0.036)GANLT(0.156)S(0.808)PR;MAPALSGANLT(0.493)S(0.507)PR;MAPALSGANLT(0.328)S(0.671)PR 113.65 1.9345e-14 47602000.0 13501.000000000002 15587.0 15634.0 15531.100000000002 16482.5 16662.699999999997 14833.599999999999 15658.2 15613.100000000002 16801.2 18230.7 True False 14871.611581089117 16900.57119258126 16695.01725487926 16490.420773312697 15324.826061538115 16527.004495700567 15398.100765257384 15345.884917379728 14956.9357030178 15740.369364689279 15988.439473929007 0.9301477861763178 1.0570494525209662 1.0441930422354484 1.0313965162267542 0.9584941724004403 1.0336846521294183 0.9630771527368736 0.9598113025603882 0.9354843996755785 0.9844844076468979 1.0 13.964741513296364 -7.776413414550669 24.585368432758898 0.9674362645536778 1.0116377295623569 0.21853691652511031 0.038034075555766975 226.995337767647 372695.26392572 0.006258746918429227 0.008667316173870251 1.6733492193887324e-08 7.776413414550669 0.04420146500867905 MAPALSGANLTS(ph)PRVPLSAYER ddPTM_A549_PD325901_60min_R1 2 MAPALSGANLTSPRVPLSAYER 22 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALSGANLT(0.254)S(0.746)PRVPLSAYER;MAPALSGANLT(0.035)S(0.965)PRVPLSAYER 122.79 6.7693e-16 15354600.0 4308.9 5044.8 5075.3 5991.2 6364.0 7635.8 6018.2 6389.200000000001 6074.0 7075.200000000001 7108.1 True False 4746.336355955472 5469.9430007271385 5419.7403782582005 6361.262816997576 5917.014594608129 7573.61657644142 6247.225894285401 6261.762393769564 5818.730902903975 6628.4706645388105 6233.848761958386 0.7613813772511853 0.8774584064514162 0.8694051757129202 1.020439067405152 0.9491751918519881 1.2149182416260835 1.0021458865682864 1.0044777524892037 0.9334090583673385 1.063303092142462 1.0 12.605907439141033 -5.7992912359932 1.4341661953418643 0.991908503219432 0.7745562457679819 0.5127499249907206 0.07826128706839634 0.3880042376410421 1.2781662935519607 0.011460535505642726 0.09066459225986818 1.5874818331517876e-06 5.7992912359932 -0.21735225745145015 MAPPVDDLS(ph)PK ddPTM_A549_MK2206_60min_R1 7 MAPPVDDLSPK 11 0 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK 142.83 2.8108e-11 137099500.0 46637.0 52326.7 47453.100000000006 44845.5 66682.5 51971.3 48017.0 48014.59999999999 71966.7 69629.40000000001 74276.0 True False 54508.185434821775 54989.90552459361 54182.663126917025 55832.649513191 56873.59258377359 57470.86847024311 56741.06735788463 54820.81658854547 55666.35735720473 53900.07018028153 55831.21928668622 0.9763029740570266 0.98493112325252 0.970472503004026 1.0000256169670492 1.0186700794001098 1.0293679630232955 1.0162964033890511 0.9819025500239847 0.9970471372184272 0.9654109451472217 1.0 15.768784442736408 -6.319514331618717 7.116973010317115 1.002389976517663 0.9780391066183629 0.28234113811266504 0.016840844856919827 0.20072966071961984 21.328867128951856 0.001962016434988405 0.004601923949399606 4.791656402906226e-07 6.319514331618717 -0.02435086989930002 MAPPVDDLS(ph)PK ddPTM_A549_PD325901_60min_R1 8 MAPPVDDLSPK 11 0 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK 163.78 1.1818e-13 227723200.0 50490.5 50501.600000000006 49652.200000000004 54004.1 59684.9 53906.1 51752.0 55277.90000000001 58743.9 54026.6 62035.4 True False 55616.2583908584 54757.54706738063 53021.896874933904 57339.81060479013 55492.83852572705 53467.10659411046 53721.450679781 54175.338919826376 56275.098170415 50615.35125576278 54405.43907480104 1.022255482845982 1.0064719263104462 0.9745697815623741 1.0539352605160428 1.0199869621386743 0.9827529655738927 0.9874279409071649 0.9957706406034458 1.0343652974299757 0.9303362332242675 1.0 15.731463268782216 -8.724186983613949 24.999968936995923 1.0162280971592819 1.0051552627263325 0.0 0.03398262351411451 469.86812448855375 315326.8143714998 0.004057119556221346 0.004600235222553641 1.8871786575360485e-09 8.724186983613949 -0.011072834432949374 MAPPVDDLS(ph)PKK ddPTM_A549_MK2206_60min_R1 4 MAPPVDDLSPKK 12 1 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 MAPPVDDLS(1)PKK;MAPPVDDLS(1)PKK;MAPPVDDLS(1)PKK;MAPPVDDLS(1)PKK 75.462 0.00051832 12616300.0 7269.700000000001 8446.099999999999 9060.9 7771.1 11595.4 8974.9 8028.2 8071.5 12657.0 10779.3 12218.7 True False 8496.647632899285 8875.970413790094 10345.871867732192 9675.01984885793 9889.732020333493 9924.617960943544 9486.820021295985 9215.659842932044 9790.209709075725 8344.248643451017 9184.459571035497 0.9251113325921402 0.9664118335042523 1.1264540703471955 1.0534119916396045 1.0767897603384498 1.0805881265177804 1.0329208755204307 1.003397072158164 1.065953813978402 0.9085181962982117 1.0 13.164979117906686 -5.538948074718035 24.361722894546098 1.0427069163618823 0.9354364264873026 0.31619887159174787 0.05380381900162096 89.38607048548793 135512.8803457262 0.005461862606770486 0.02116785801358487 2.8910255195948076e-06 5.538948074718035 -0.10727048987457966 MAPPVDDLS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 MAPPVDDLSPKK 12 1 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 MAPPVDDLS(1)PKK;MAPPVDDLS(1)PKK 57.159 0.0031825 12516000.0 2402.7 2746.2 1848.7 2141.6 2764.0 2800.0 2464.3 2916.4 2977.1 2443.5 2785.7 True False 2646.6203352257457 2977.6319117897397 1974.163899136196 2273.881768073508 2569.8661752823505 2777.1977283370416 2558.080285016703 2858.23011412846 2851.9828401441255 2289.2169929896813 2443.0765600072414 1.0833145299457587 1.2188041752489795 0.8080646883740494 0.9307451945209478 1.0518975202622112 1.1367624632806472 1.0470733201292393 1.1699306361974953 1.1673735022596559 0.9370222081713624 1.0 11.254483359487928 -6.997443656100491 24.82953249116091 1.0895937266975135 1.008268579095032 0.06152050176048396 0.11437191976247663 143.75849342496133 1396278.1847365156 0.01660770202785179 0.031252666067388774 1.0059035570672744e-07 6.997443656100491 -0.08132514760248144 MAPS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 MAPSPTK 7 0 Q15287-2;Q15287-3;H3BMS0 Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 MAPS(0.999)PT(0.001)K;MAPS(0.983)PT(0.017)K 76.827 0.0062119 15887000.0 5567.1 5622.0 4817.700000000001 4497.0 6345.6 4786.5 5148.700000000001 5276.4 7902.8 7945.7 7654.5 True False 6506.690377472743 5908.135786496475 5500.922303211978 5598.765201878001 5412.170645965489 5293.004252978444 6084.152144147709 6024.345858297301 6112.828418178367 6150.76085147169 5753.676396547195 1.1308752750463054 1.026845338406931 0.9560708535003992 0.9730761370656583 0.9406456451414882 0.9199342973398362 1.0574373191719357 1.0470428719127367 1.062421310633094 1.0690140403382415 1.0 12.490268366666443 -7.834234485859952 24.999999993984048 1.0337287868258982 0.988124960783322 0.18221636149980802 0.05558004913790282 69.13756041755259 23742.317029336715 0.0090969034009284 0.012569181089315927 1.4647567706007713e-08 7.834234485859952 -0.04560382604257618 MAPS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 MAPSPTK 7 0 Q15287-2;Q15287-3;H3BMS0 Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 MAPS(0.996)PT(0.004)K;MAPS(0.943)PT(0.057)K 54.982 0.014602 20062200.0 5075.1 4709.6 4943.4 4963.3 5161.200000000001 5734.2 4742.2 5712.700000000001 5390.7 5213.299999999999 5716.2 True False 5590.320415908848 5106.494520342637 5278.888851079072 5269.871768527851 4798.695117173397 5687.50257636795 4922.667016031413 5598.755716973547 5164.147625664217 4884.1313482926535 5013.14363797731 1.1151327030726004 1.01862122634152 1.0530096945734002 1.0512110063245912 0.9572227455883474 1.134518176036689 0.9819521185747627 1.1168153400911764 1.030121616014145 0.9742651918633812 1.0 12.291499855871667 -9.54915631051037 1.3907086840174936 1.0072396578348968 1.04954178930563 0.1565137351969843 0.05360018236049036 0.5670813160756685 2.240000513959776 0.011703809684932183 0.009017488467262422 2.8238634320028427e-10 9.54915631051037 0.04230213147073325 MAPT(ph)PIPTR ddPTM_A549_MK2206_60min_R1 2 MAPTPIPTR 9 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 MAPT(0.961)PIPT(0.039)R;MAPT(0.92)PIPT(0.08)R 64.374 0.0066795000000000005 10990800.0 2044.52 2307.6 2098.57 1783.1399999999999 2933.1 2269.59 2095.3 2144.5 3281.3 2838.8999999999996 3217.9 True False 2389.5849922851353 2425.046983443483 2396.178781960595 2220.009380048195 2501.6448754540766 2509.7565073680885 2475.9888879974947 2448.4894422558104 2538.0907891593733 2197.5905182983197 2418.8066204780475 0.9879189894944405 1.002579934630823 0.990645040274869 0.9178118503782817 1.034247572449449 1.0376011402151966 1.0236406941486482 1.0122716803924972 1.0493152977470148 0.9085432872942909 1.0 11.240079717547792 MAPT(ph)PIPTR ddPTM_A549_PD325901_60min_R1 2 MAPTPIPTR 9 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 MAPT(0.99)PIPT(0.01)R;MAPT(0.999)PIPT(0.001)R 82.831 0.0015702 21377000.0 4309.799999999999 5300.9 5176.799999999999 5238.2 5308.9 5169.3 4892.6 5993.799999999999 5711.6 5643.6 5521.5 True False 4747.32772329293 5747.625446510166 5528.128778627286 5561.751717184651 4936.021178710734 5127.20293467595 5078.790570333451 5874.248956954862 5471.561314624027 5287.262132857201 4842.390503672323 0.9803686257216762 1.1869396824050724 1.1416115190286533 1.148554977746381 1.019335630814451 1.0588164937932276 1.0488188770570754 1.2130886496039526 1.1299297961357226 1.0918702506226008 1.0 12.241503711581492 -10.772710702210716 1.0668972957925713 1.001094748470558 1.1066689703657038 0.03171080578144292 0.07263871990120138 0.5682622896822702 1.1673968108529165 0.04365600723149643 0.011536046585626902 1.6876768679117832e-11 10.772710702210716 0.10557422189514587 MAPT(ph)PIPTRS(ph)PSDSSTASTPVAEQIER ddPTM_A549_MK2206_60min_R1 2 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 2 MAPT(0.986)PIPT(0.236)RS(0.713)PS(0.047)DS(0.011)S(0.004)T(0.003)ASTPVAEQIER;MAPT(0.998)PIPT(0.337)RS(0.486)PS(0.111)DS(0.036)S(0.013)T(0.014)AS(0.003)T(0.003)PVAEQIER 69.625 0.00010233 9644200.0 1563.06 1602.62 1600.39 1287.4499999999998 2621.6000000000004 1633.92 1529.6399999999999 2065.31 2774.5 2423.7 2342.86 True False 1826.8663148519965 1684.1865126565258 1827.349366884076 1602.8753077958263 2235.96611281252 1806.820329891683 1807.5557880191318 2358.074017246606 2146.0801799660735 1876.1844866672438 1761.0632023534597 1.037365559856454 0.9563464334532702 1.0376398555384228 0.9101747771765185 1.2696682945986304 1.025982671988759 1.0264002936428063 1.3390058994448977 1.2186275751478326 1.0653703309227844 1.0 10.782230971279073 -6.740836145788254 24.999998604756502 1.1213434241841025 0.9870404604487019 0.30517313764438947 0.10734395390341007 296.6608784363584 359967.0181181874 0.017230274004944757 0.035835341087451185 1.8162007647606753e-07 6.740836145788254 -0.13430296373540063 MAPTPIPT(ph)RSPSDSSTASTPVAEQIER ddPTM_A549_MK2206_60min_R1 1 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 MAPT(0.002)PIPT(0.534)RS(0.432)PS(0.03)DS(0.001)STASTPVAEQIER 75.068 2.0893e-06 12495000.0 1283.2 1402.8 1666.0 1227.4 1638.6 1535.3 1756.4 1369.5 2396.2 2504.1 1996.9 True False 1499.7727887720755 1474.1965281567514 1902.263851454253 1528.1130551000795 1397.5641106402945 1697.76442695034 2075.51514479015 1563.6308189178515 1853.4645259451095 1938.422070827019 1501.0146183637185 0.9991726732195342 0.9821333584104585 1.2673186711052442 1.0180534129413752 0.9310796134442734 1.1310778763774478 1.3827414599417454 1.0417159165460974 1.2348077781984579 1.291407856467198 1.0 10.551722312079146 -7.437974957642247 24.99994772112407 1.1316433371137131 1.0461465897451503 0.16961818807459106 0.13276286219543063 178.73486805583372 52625.913577637235 0.02068362476770706 0.03306505648710461 3.647749800323318e-08 7.437974957642247 -0.08549674736856283 MAPTPIPTRS(ph)PSDSSTASTPVAEQIER ddPTM_A549_MK2206_60min_R1 5 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 MAPTPIPT(0.24)RS(0.594)PS(0.159)DS(0.005)S(0.002)TASTPVAEQIER;MAPTPIPT(0.015)RS(0.672)PS(0.309)DS(0.003)S(0.001)TASTPVAEQIER;MAPTPIPT(0.463)RS(0.509)PS(0.023)DS(0.004)S(0.001)TASTPVAEQIER;MAPTPIPT(0.035)RS(0.806)PS(0.153)DS(0.004)S(0.001)T(0.001)ASTPVAEQIER;MAPTPIPT(0.118)RS(0.87)PS(0.012)DSSTASTPVAEQIER 191.99 1.1209e-58 481802000.0 25470.199999999997 28914.9 26844.199999999997 25610.499999999996 34211.8 25031.300000000003 26527.9 25355.6 37872.8 40013.7 39154.6 True False 29768.947073396586 30386.544904476512 30651.11121321021 31885.073649699047 29179.289540097405 27680.09555156783 31347.676047300483 28949.833948268344 29294.671270434013 30974.57737927844 29431.43220801444 1.011467836936941 1.0324521310995523 1.041441374533708 1.0833680612055454 0.991432878083032 0.9404943448192199 1.0651087526336633 0.9836366012927175 0.9953532353908626 1.0524318748865977 1.0 14.845070128729725 -6.801434680485185 24.998369856923475 0.99706951850419 1.0414344896871404 0.1948621599058089 0.03549127913839802 130.485421394871 81557.31802722515 0.00423809032349663 0.00800930778430946 1.5796661775752003e-07 6.801434680485185 0.04436497118295035 MAPTPIPTRS(ph)PSDSSTASTPVAEQIER ddPTM_A549_PD325901_60min_R1 6 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 MAPTPIPT(0.266)RS(0.545)PS(0.187)DS(0.001)STASTPVAEQIER;MAPTPIPT(0.179)RS(0.637)PS(0.184)DSSTASTPVAEQIER;MAPT(0.151)PIPT(0.151)RS(0.533)PS(0.123)DS(0.032)S(0.008)T(0.002)ASTPVAEQIER;MAPTPIPT(0.186)RS(0.668)PS(0.138)DS(0.005)S(0.001)T(0.001)ASTPVAEQIER;MAPTPIPT(0.009)RS(0.934)PS(0.029)DS(0.029)STASTPVAEQIER;MAPTPIPT(0.118)RS(0.569)PS(0.31)DS(0.004)STASTPVAEQIER 288.07 2.136199999999999e-155 777033000.0 45018.399999999994 46196.9 46575.2 47112.200000000004 51927.8 50810.8 52999.7 54257.8 50213.7 51754.9 53607.799999999996 True False 49588.63482720553 50090.07489103462 49736.07315142974 50022.213594430665 48280.57046918479 50397.01369106704 55016.63258604869 53175.58561457929 48103.3928118455 48487.0867814535 47014.38044784299 1.0547546166692205 1.0654202908534285 1.0578906427705912 1.0639768751164236 1.0269319729257411 1.0719489060794216 1.1702086055793774 1.1310493748518382 1.0231633885978917 1.0313245930198807 1.0 15.520814485862038 -8.927150056015817 8.332428364186093 1.0101545599590873 1.0794536913196513 0.3469815145316263 0.03787511836822139 0.2066755395827352 21.08150626789902 0.007161973290870463 0.00759834683634629 1.1826328656661673e-09 8.927150056015817 0.06929913136056398 MAPTPIPTRSPS(ph)DSSTASTPVAEQIER ddPTM_A549_MK2206_60min_R1 1 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 MAPTPIPT(0.026)RS(0.419)PS(0.548)DS(0.005)S(0.001)TASTPVAEQIER 125.97 5.7966e-19 67124000.0 7075.1 7390.7 6776.1 6724.3 9574.6 7189.4 7566.5 6800.6 10969.0 9481.4 10842.0 True False 8269.203910412494 7766.8550617679675 7737.052871452076 8371.753801865296 8166.18902339593 7950.177536062515 8941.235107637587 7764.605875964036 8484.539013893624 7339.545154881715 8149.632176022554 1.01467204062801 0.9530313631355322 0.9493744876260369 1.0272554173053672 1.0020316067051578 0.975525933483616 1.0971335778741094 0.9527553769615121 1.0410947182200954 0.9005983333181297 1.0 12.9925192311465 -6.269568136450734 24.53485784855223 1.0166295926406517 0.9704265031684326 0.0 0.05188984221802728 476.6405061899269 1438634.7093777573 0.005043296894614739 0.011903363230826892 5.375660877754828e-07 6.269568136450734 -0.04620308947221907 MAS(ph)APWPER ddPTM_A549_MK2206_60min_R1 1 MASAPWPER 9 0 Q6SJ96 Q6SJ96 TBPL2 TATA box-binding protein-like protein 2 1 MAS(1)APWPER 45.137 0.017795 1905200.0 631.86 756.85 683.17 760.61 881.04 830.47 786.33 602.24 856.83 863.57 851.13 True False 738.5025205061752 795.3704322322766 780.0537787503008 946.95948414508 751.4401831066311 918.3497841786298 929.1959825796164 687.6093642826488 662.7593730763491 668.4889372245875 639.7709310070168 1.1543233440502716 1.2432112709158918 1.2192704309376405 1.4801539711323553 1.1745456798480105 1.43543530921782 1.452388562132757 1.0747743152386324 1.0359323016335673 1.0448879510239202 1.0 9.321411632611621 -8.413518486652373 5.676900904874704 1.0187782769022724 1.3082854181544104 0.6042169405379407 0.1052788640402595 0.10946421419621252 4.8760462488016865 0.01699672274949283 0.020543713537474598 3.85905984350267e-09 8.413518486652373 0.28950714125213795 MAS(ph)APWPER ddPTM_A549_PD325901_60min_R1 1 MASAPWPER 9 0 Q6SJ96 Q6SJ96 TBPL2 TATA box-binding protein-like protein 2 1 MAS(1)APWPER 45.997 0.014637 2693400.0 366.69 723.02 557.45 968.86 517.0 524.19 912.22 621.77 488.67 770.81 799.83 True False 403.9160988570895 783.9514328389107 595.2819092191664 1028.704281759292 480.6877035531745 519.921170434641 946.9350312859374 609.3683095808707 468.13289929570055 722.1409250527425 701.4559805401125 0.5758252977557894 1.1176060288705183 0.8486375848714081 1.4665272095437867 0.685271373954287 0.7412028478740863 1.3499564585033677 0.8687192446654523 0.6673731670734976 1.0294885852946936 1.0 9.454208760976845 -8.499559388592882 24.53382175488085 0.8389851285586267 0.9797500209934261 0.005626372233932031 0.2711331806399676 1487.2572320736244 1564715.4713501856 0.043504601200120105 0.052408625414367443 3.1654875619924617e-09 8.499559388592882 0.1407648924347994 MAS(ph)NIFGTPEENQASWAK ddPTM_A549_MK2206_60min_R1 1 MASNIFGTPEENQASWAK 18 0 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 MAS(0.685)NIFGT(0.315)PEENQASWAK 88.021 2.5768e-06 4094900.0 617.57 763.54 630.43 561.14 1083.1 1025.0 858.07 896.73 1481.3 1477.6 1385.4 True False 721.8007178631321 802.4009246569761 719.8344537048644 698.6193251905315 923.7774247738944 1133.4648196600667 1013.9702119620148 1023.8442236204488 1145.7879151500258 1143.8091337622313 1041.3669449051506 0.6931281249078585 0.7705265935150842 0.6912399680310845 0.6708675828520396 0.887081570327771 1.0884394066908898 0.9736915665729805 0.9831733459848797 1.1002729832704514 1.0983728063947826 1.0 10.024262803168654 -6.980884966824755 3.4309429142696044 1.0390661316892627 0.7108289022185796 0.9122533827780113 0.04833143347826048 0.052877823949841196 1.3173357159089714 0.007745979986241805 0.014861767721251955 1.0449969747551188e-07 6.980884966824755 -0.328237229470683 MAS(ph)NIFGTPEENQASWAK ddPTM_A549_PD325901_60min_R1 1 MASNIFGTPEENQASWAK 18 0 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 MAS(0.995)NIFGT(0.005)PEENQASWAK 142.08 4.2666000000000004e-17 6914700.0 1797.6 1755.1 2274.3 1703.9 1652.8 2113.3 2001.7 1372.8 2530.8 2109.7 2498.3 True False 1980.091028676822 1903.008436523985 2428.6476744769034 1809.146033162332 1536.713029850458 2096.089985462382 2077.8757888722703 1345.4184270592339 2424.43927709407 1976.493181956346 2191.0249380285372 0.9037282024085442 0.8685471367734834 1.108452775832929 0.8257076410961274 0.7013672017960587 0.9566709849265447 0.9483578907786976 0.6140589290918013 1.106532032116237 0.9020861185335367 1.0 11.09739018969554 MAS(ph)RRSEEKEAGEI ddPTM_A549_MK2206_60min_R1 3 MASRRSEEKEAGEI 14 3 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 MAS(0.785)RRS(0.215)EEKEAGEI;MAS(0.5)RRS(0.5)EEKEAGEI;MAS(0.5)RRS(0.5)EEKEAGEI 78.021 0.00020033 102578000.0 4019.5 5092.700000000001 4327.53 3903.7400000000002 4627.7 3347.96 3947.62 2607.2999999999997 6001.210000000001 6816.700000000001 7375.3 True False 4697.893332660035 5351.896677319565 4941.238826580925 4860.156475245549 3946.9714602771214 3702.2389050040133 4664.8514551790495 2976.89275952137 4641.945516963128 5276.802735596243 5543.809462075187 0.8474124813989361 0.9653825070885852 0.8913074773553445 0.8766817309457584 0.7119601579524111 0.6678149619554515 0.8414523419484331 0.5369760234160437 0.8373205372079169 0.951836958267502 1.0 12.436661958291063 -10.061301424474571 1.0792646436173652 0.979290286615558 0.7987571586480453 0.26149093347573515 0.11430134710349488 0.4400043783902884 1.0297800445169676 0.042704442611544435 0.022597308838274453 8.683575317658717e-11 10.061301424474571 -0.18053312796751264 MAS(ph)VVIDDLPK ddPTM_A549_PD325901_60min_R1 1 MASVVIDDLPK 11 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 MAS(1)VVIDDLPK 49.448 0.010067 888600.0 1486.0 1614.4 2021.1 1841.2 2026.9 1610.8 1398.6 1587.3 1552.6 1664.3 1863.6 True False 1636.8576260646173 1750.451153737292 2158.263999861616 1954.9267423314081 1884.537536425396 1597.6821788590382 1451.8244883432853 1555.6400562872386 1487.349621311938 1559.2158139687854 1634.3890143337378 1.0015104187003396 1.0710125547747071 1.3205326155116364 1.196120828754064 1.1530532326746161 0.9775409433416541 0.8882979973621058 0.9518174942710311 0.9100340300061668 0.9540053195991427 1.0 10.674535696697369 -7.289263596390182 4.561190463692838 0.9507087259085388 1.1573024701949841 0.619703433078943 0.07863382453463126 0.1121127541727851 5.8786918346705805 0.012555580920497847 0.020845902255594184 5.1373174585065544e-08 7.289263596390182 0.20659374428644528 MASNIFGT(ph)PEENQASWAK ddPTM_A549_MK2206_60min_R1 5 MASNIFGTPEENQASWAK 18 0 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 MAS(0.125)NIFGT(0.875)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MAS(0.005)NIFGT(0.995)PEENQASWAK;MASNIFGT(0.998)PEENQAS(0.002)WAK;MASNIFGT(1)PEENQASWAK 136.01 3.4785e-13 23295300.0 4787.54 4293.45 4381.11 3946.02 8167.599999999999 6391.63 6173.08 6246.76 9647.2 9046.300000000001 9985.5 True False 5595.559707884867 4511.96826619233 5002.417276257343 4912.795077143572 6966.156859554294 7067.988044179381 7294.648730358215 7132.25735990017 7462.124603412759 7002.734547071795 7505.824764219998 0.7454956495332402 0.6011289109360405 0.6664713650262246 0.6545310117767061 0.9281001193581975 0.9416670740665611 0.9718650460814845 0.9502296661519983 0.9941778335919117 0.9329733596304545 1.0 12.873794893200069 -6.826233376364521 3.5893197508348598 0.986241270667805 0.6594399573275315 0.9221426794630991 0.04071413015798023 0.03697015785770143 0.9577932371821921 0.00546394603682412 0.011025993889483497 1.4919924437275304e-07 6.826233376364521 -0.3268013133402735 MASNIFGT(ph)PEENQASWAK ddPTM_A549_PD325901_60min_R1 4 MASNIFGTPEENQASWAK 18 0 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MAS(0.001)NIFGT(0.977)PEENQAS(0.023)WAK 169.64 1.4778e-30 29107800.0 8879.8 7372.19 7228.400000000001 8201.2 8391.8 8779.5 7245.54 7363.0 11053.1 8985.800000000001 10240.3 True False 9781.27075903674 7993.470324003051 7718.962691900298 8707.76949772341 7802.388918138362 8708.00266283395 7521.272989611622 7216.139188838243 10588.576645190644 8418.43505447378 8980.808018610107 1.089130369869605 0.8900613739252542 0.8594953456197925 0.9695975551062995 0.8687847354013342 0.9696235177045486 0.8374828828348158 0.8035066748877048 1.179022714130945 0.9373805827971189 1.0 13.132629537200788 -8.763537585148386 24.999999676051882 1.084538502307759 0.908603093666471 0.23001823439286684 0.09448793948658883 38.52600395753588 459034.2413066522 0.016090278115504876 0.017545215554490436 1.7237029101466979e-09 8.763537585148386 -0.17593540864128798 MASRRS(ph)EEK ddPTM_A549_PD325901_60min_R1 1 MASRRSEEK 9 2 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 MAS(0.21)RRS(0.79)EEK 42.083 0.039983 10767000.0 2266.6 2404.9 2073.0 2124.8 2176.4 1423.1 1430.7 1690.4 2018.5 2945.0 3100.1 True False 2496.7035634172694 2607.569362997285 2213.6862459616686 2256.0440702290757 2023.5371721723968 1411.5107454273007 1485.1460714090804 1656.6836459068547 1933.6694645228308 2759.0521974031567 2718.807353153051 0.9183083753697358 0.9590857402872768 0.8142122476586714 0.8297918083871224 0.7442738338285217 0.5191654141255524 0.5462491006163894 0.6093420499196341 0.7112197420976955 1.014802389070867 1.0 11.408758214436975 -5.854727611573206 3.8910232594702356 0.7860736637943654 0.9394981369481017 0.14899511323812764 0.15623393534163393 0.4200611588446724 11.87040383566394 0.02592980669129507 0.09214785985692531 1.3972444345512624e-06 5.854727611573206 0.1534244731537363 MASRRS(ph)EEKEAGEI ddPTM_A549_MK2206_60min_R1 3 MASRRSEEKEAGEI 14 3 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 MAS(0.024)RRS(0.976)EEKEAGEI;MAS(0.08)RRS(0.92)EEKEAGEI;MAS(0.073)RRS(0.927)EEKEAGEI 103.71 7.3272e-06 185747000.0 13214.1 17209.699999999997 15425.8 13779.1 17478.2 13402.300000000001 13021.800000000001 11731.800000000001 20674.3 24922.5 26405.1 True False 15444.31702627266 18085.600221428038 17613.410396016203 17154.980118567317 14907.179933231537 14820.522490273268 15387.692503090611 13394.818577130678 15991.60406007303 19292.489940572017 19847.984926313704 0.7781302275072354 0.91120586238711 0.8874155467875741 0.8643184777827948 0.7510676770752766 0.7467016195999213 0.7752773170786821 0.6748704529381386 0.8057041618805327 0.9720125248077334 1.0 14.276704924228348 -10.448737812269139 0.9183062386119243 0.9933016406632587 0.8020003375377736 0.5406899146939257 0.06574693935067259 0.3456828937569317 0.549176108440181 0.04010514269113745 0.01349482920122029 3.558460814167405e-11 10.448737812269139 -0.1913013031254851 MASRRS(ph)EEKEAGEI ddPTM_A549_PD325901_60min_R1 6 MASRRSEEKEAGEI 14 3 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 MAS(0.002)RRS(0.998)EEKEAGEI;MAS(0.257)RRS(0.743)EEKEAGEI;MAS(0.225)RRS(0.775)EEKEAGEI;MAS(0.097)RRS(0.903)EEKEAGEI;MAS(0.003)RRS(0.997)EEKEAGEI;MAS(0.062)RRS(0.938)EEKEAGEI 115.2 1.1931999999999999e-06 1017913000.0 46258.8 43749.90000000001 47051.200000000004 49805.49999999999 47639.700000000004 66758.0 57277.0 60819.2 55143.200000000004 55223.7 61503.600000000006 True False 50954.959322071336 47436.8576132874 50244.377373850315 52881.87261850259 44293.65182004291 66214.34498154429 59456.70757817706 59606.11334426063 52825.72306964349 51736.8661574644 53939.04710344308 0.9446766685431256 0.8794530152213121 0.9315028735582367 0.9804005717247272 0.8211797241263374 1.2275772105235734 1.1022943631939277 1.1050642631848757 0.9793595902488882 0.9591727873546712 1.0 15.719042414447395 MATFPGPGS(ph)SPAR ddPTM_A549_MK2206_60min_R1 2 MATFPGPGSSPAR 13 0 O43187 O43187 IRAK2 Interleukin-1 receptor-associated kinase-like 2 1 MATFPGPGS(0.5)S(0.5)PAR;MAT(0.001)FPGPGS(0.499)S(0.499)PAR 81.565 2.4793e-06 2897600.0 2559.1 3025.3 2551.0 2771.1 4241.4 3410.2 2733.5 2894.5 4937.1 3188.3 4300.3 True False 2991.0135160120144 3179.2748478989297 2912.7701590995193 3450.019624399408 3617.4956785486065 3771.065100492445 3230.141567002887 3304.804239034482 3818.85473292864 2468.0608156294825 3232.4168277577737 0.9253180129268127 0.9835596760286306 0.9011121752883636 1.0673189159185816 1.1191303199154392 1.1666394841497947 0.9992961115858114 1.0223942069151153 1.181423973583772 0.7635342058720499 1.0 11.658397533668962 -6.333856583125437 6.008519833469251 1.0842867789015036 0.9416727766548664 0.050787834430689016 0.11374120198477633 0.1663220903317734 10.781793328586732 0.010718201613729357 0.025292905328877756 4.635999888800823e-07 6.333856583125437 -0.14261400224663723 MATLTSGGEKPNKDLES(ph)CSDDDNQGSK ddPTM_A549_MK2206_60min_R1 1 MATLTSGGEKPNKDLESCSDDDNQGSK 27 2 A0A0A0MRK1;Q5T3I0;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 MAT(0.002)LT(0.002)S(0.002)GGEKPNKDLES(0.537)CS(0.457)DDDNQGSK 57.78 0.0010157 5002000.0 1301.9 1713.4 1361.3 949.9 2320.6 1792.9 1543.6 1482.3 2090.8 2292.3 2546.3 True False 1521.6288916009698 1800.6047414768884 1554.35280971469 1182.625542642632 1979.2428140802324 1982.6234879693 1824.052139317964 1692.4205643533642 1617.2371383215234 1774.4678379285083 1913.9834356950957 0.795006301111673 0.9407629699903688 0.8121035849770561 0.6178870310929003 1.034096104056113 1.0358624066405655 0.9530135451018302 0.8842399222429701 0.844958795442342 0.9271072073223455 1.0 10.902362628935373 -6.789471812818488 24.99999951508824 0.9385386408076442 0.8035815347658621 0.42561465467078397 0.08937860637468908 204.50884767050735 182385.41322745406 0.01447991302509527 0.02736837979259721 1.6237837361217605e-07 6.789471812818488 -0.13495710604178202 MATLTSGGEKPNKDLES(ph)CSDDDNQGSK ddPTM_A549_PD325901_60min_R1 3 MATLTSGGEKPNKDLESCSDDDNQGSK 27 2 A0A0A0MRK1;Q5T3I0;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 MATLTSGGEKPNKDLES(0.54)CS(0.459)DDDNQGSK;MATLTSGGEKPNKDLES(0.549)CS(0.451)DDDNQGSK;MATLTSGGEKPNKDLES(0.539)CS(0.46)DDDNQGSK 78.15899999999999 2.0952000000000003e-06 34190400.0 3425.5 3635.3 3809.4 3175.46 2713.84 3252.1600000000003 4270.900000000001 4074.7000000000003 2642.02 4302.4 4073.3 True False 3773.2542382801817 3941.659489086461 4067.9287917831075 3371.600952207087 2523.229240639745 3225.6754872102106 4433.431436626154 3993.4269119596884 2530.985087272038 4030.7457297478236 3572.309922776142 1.0562505269273728 1.103392363567181 1.1387390455254247 0.9438153533965837 0.7063298804373819 0.9029663038596181 1.2410545368305588 1.1178836658316267 0.708500981713574 1.1283303567948602 1.0 11.80264153439784 -6.3599129805338865 5.178541879306289 0.8999439071546596 1.098997009253943 0.0030930033472217344 0.16630046643397886 0.2820652970267795 11.703401316977933 0.02522069797879523 0.05991085916263338 4.3660330556084656e-07 6.3599129805338865 0.1990531020992834 MATLTSGGEKPNKDLESCS(ph)DDDNQGSK ddPTM_A549_MK2206_60min_R1 1 MATLTSGGEKPNKDLESCSDDDNQGSK 27 2 A0A0A0MRK1;Q5T3I0;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 MATLTSGGEKPNKDLES(0.137)CS(0.863)DDDNQGSK 130.61 8.3673e-25 5503300.0 1258.6 1343.3 1473.6 1437.5 1715.0 1643.7 1654.3 1541.4 2236.2 2266.4 2292.2 True False 1471.0209101843323 1411.6682323018001 1682.578638357134 1789.6875645318262 1462.7257718467624 1817.6352430002457 1954.8648963939545 1759.8981703395236 1729.7042704776127 1754.4186659168392 1722.983478498331 0.8537637931771713 0.8193161744836589 0.9765494906681219 1.0387142923109347 0.8489493893009372 1.0549348067947864 1.1345813356827543 1.0214248669832666 1.0039006711690233 1.0182446249838133 1.0 10.750693152445027 -5.83171232369709 4.675425131714344 1.0075144378302139 0.8359966770013805 0.5234312629853566 0.06450504574309594 0.11311014633835623 4.639029551191202 0.008751997841219198 0.029826800790758102 1.4732880840839997e-06 5.83171232369709 -0.1715177608288334 MATLTSGGEKPNKDLESCS(ph)DDDNQGSK ddPTM_A549_PD325901_60min_R1 2 MATLTSGGEKPNKDLESCSDDDNQGSK 27 2 A0A0A0MRK1;Q5T3I0;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 MATLTSGGEKPNKDLES(0.102)CS(0.898)DDDNQGSK;MATLTSGGEKPNKDLES(0.027)CS(0.973)DDDNQGSK 174.72 3.3356999999999995e-49 20038200.0 3895.2 4094.6000000000004 5977.700000000001 4674.700000000001 4622.3 5221.200000000001 5165.6 5887.2 4158.7 4851.200000000001 5118.700000000001 True False 4290.637836505315 4439.666311999948 6383.382668830227 4963.445601986008 4297.645594069323 5178.680278283343 5362.179734724779 5769.775177580944 3983.924301268811 4544.894404089027 4489.132350112743 0.9557833233403238 0.9889809356786837 1.4219635713502434 1.1056581127222398 0.957344372785398 1.1536038312956585 1.1944802060892927 1.2852762466306074 0.8874597562642047 1.0124215660460276 1.0 12.132220915563929 -8.780213764986033 24.999755262475706 0.9468559865084146 1.1337101178788462 0.22361984005916813 0.1366144259721623 231.77474236918616 308627.24425996543 0.02405778598612133 0.02563284193918451 1.6587702397334384e-09 8.780213764986033 0.1868541313704316 MCALFTDLS(ph)SKDMKR ddPTM_A549_MK2206_60min_R1 1 MCALFTDLSSKDMKR 15 2 Q8IZD9 Q8IZD9 DOCK3 Dedicator of cytokinesis protein 3 1 MCALFTDLS(0.5)S(0.5)KDMKR 40.025 0.035959 3097300.0 856.06 872.73 995.08 780.25 1490.4 1066.1 717.55 1244.4 1560.2 1450.7 1356.2 True False 1000.5419993424431 917.1482292687779 1136.19730690582 971.411285026754 1271.164134320941 1178.9139943800944 847.9195468823568 1420.7975108151702 1206.8171911274355 1122.9858624450924 1019.4181107841528 0.9814834450731997 0.8996781787242261 1.114554759118257 0.9529076193079685 1.2469507073433699 1.1564577692986588 0.831768180212262 1.3937338328453572 1.1838294595326861 1.1015949692921128 1.0 9.99353017388557 -5.949919398182002 1.491755614821647 1.10386919901789 0.9375173739311868 0.14915190294432545 0.14476983001421648 0.7435407388955737 2.885708518555457 0.021203563572067357 0.12404983498885844 1.1222267118869035e-06 5.949919398182002 -0.1663518250867031 MDDPQRS(ph)QNKDR ddPTM_A549_PD325901_60min_R1 1 MDDPQRSQNKDR 12 2 Q8N5V2-3;Q8N5V2 Q8N5V2-3 NGEF Ephexin-1 1 MDDPQRS(1)QNKDR 47.773999999999994 0.016985 4487300.0 627.09 573.45 510.91 542.93 1137.7 749.7 693.78 659.12 722.67 747.08 732.86 True False 690.7517151607417 621.7766440229504 545.5834249514118 576.4655530165062 1057.7918768519287 743.5946917622424 720.1821775509832 645.9733345303626 692.2986930526205 699.9092413025292 642.7228659823048 1.0747271518106518 0.9674101808602356 0.848862634002557 0.8969115361026804 1.6457977969015518 1.1569445107974652 1.1205174355362222 1.0050573407608425 1.0771340646089298 1.0889751685321225 1.0 9.328052989444192 -4.8458627102991 17.08255211959252 1.0610477027837262 6.960219484955669 0.0 0.20074795302320902 4809.822249234483 535462.1530787846 0.026755095518711594 5018.998638723565 1.426058329651947e-05 4.8458627102991 5.899171782171942 MDELQLFR ddPTM_A549_PD325901_60min_R1 1 MDELQLFR 8 0 P55072;C9JUP7;C9IZA5 P55072 VCP Transitional endoplasmic reticulum ATPase 0 73.931 0.014181000000000001 869810.0 357.28 396.53 457.37 454.47 298.37 604.99 368.49 455.93 548.75 275.86 559.29 False True 393.5508025843655 429.946974722156 488.4098785892369 482.54157972374264 277.4135205206203 600.0631620237953 382.513088595465 446.8361184798345 525.6879458295284 258.442152521438 490.50087563142125 0.8023447503080355 0.8765468036498115 0.9957370166985071 0.98377312599609 0.5655719169991412 1.2233681769708047 0.7798418057930199 0.9109792472941518 1.0717370181099288 0.5268943754458046 1.0 8.93811190168913 -8.699724028853746 6.820362404133222 1.0337933884933324 0.8940090735631777 0.0 0.2166265486731221 0.2853278856805534 25.153550378780476 0.024003268185368444 0.0271440250819791 1.996530601437606e-09 8.699724028853746 -0.13978431493015464 MDFAFPGSTNS(ph)LHR ddPTM_A549_MK2206_60min_R1 1 MDFAFPGSTNSLHR 14 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 MDFAFPGS(0.072)T(0.133)NS(0.795)LHR 46.543 0.008148 3296000.0 1422.4 1707.3 2060.8 1774.0 2381.3 1625.6 1967.3 1672.3 2668.1 2683.9 2152.9 True False 1662.4663456588219 1794.1942775320933 2353.0524280173595 2208.630079637886 2031.0139244890345 1797.6199130140526 2324.7329448563305 1909.3536462039592 2063.779610080187 2077.6051259504975 1618.2755129827494 1.0273073604102316 1.10870754895444 1.4540493316124488 1.3648047331365816 1.255048295667244 1.1108243921337855 1.4365495406721338 1.1798693305843235 1.2752955807112842 1.2838389441616944 1.0 10.660241533577203 -10.709357691804017 0.7767720281024948 0.9849727120381137 1.2535786324840832 0.0 0.15388021861803575 0.7019557869483345 0.6846640648927323 0.11789422541426438 0.024719667379803623 1.9527304935644577e-11 10.709357691804017 0.26860592044596954 MDFAFPGSTNS(ph)LHR ddPTM_A549_PD325901_60min_R1 2 MDFAFPGSTNSLHR 14 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 MDFAFPGS(0.101)T(0.075)NS(0.823)LHR;MDFAFPGS(0.07)T(0.07)NS(0.861)LHR 87.088 1.9887e-05 25915000.0 1597.29 1669.05 1711.9099999999999 1988.77 2461.5 2597.9 2009.3899999999999 2245.88 2466.4 2501.5 2242.3 True False 1759.4457049372515 1809.7067010314836 1828.090507151105 2111.611806075622 2288.612731714004 2576.7435637309986 2085.8584360304 2201.0841615412223 2362.7457851370377 2343.5548630913404 1966.5113151108292 0.8947040840383328 0.9202625416520889 0.9296109781336687 1.0737857391665278 1.163793319737406 1.3103120963154884 1.060689770764347 1.1192837511932512 1.2014910704970327 1.1917322036660958 1.0 10.941422772090796 -6.299649745842565 3.2247165487068146 1.1169741191951572 0.9105419475006363 0.6085983191208651 0.07960904446861523 0.1722810644405356 3.6296523560366105 0.013708360313811528 0.03652598703714316 5.015915991566175e-07 6.299649745842565 -0.20643217169452088 MDKVVEILK ddPTM_A549_PD325901_60min_R1 2 MDKVVEILK 9 1 B3KSJ7 B3KSJ7 DCLRE1C 0 ; 72.79 0.00074062 1757600.0 1175.6 834.52 1200.0 885.98 1394.7 1350.3 1184.5 1223.0 1442.0 1273.0 1389.0 False True 1294.9460465690215 904.847929148195 1281.439216186205 940.7049723934291 1296.7410834537966 1339.3036044905382 1229.5767956832701 1198.6063055750608 1381.3977546900778 1192.6225627484603 1218.1618055964595 1.0630328751236502 0.7427978163419319 1.0519449963863892 0.7722331861593897 1.0645064370729154 1.0994463940155823 1.009370668193969 0.9839467138671093 1.1340018611186808 0.9790346054763273 1.0 10.250490060457667 -6.803531714706712 24.99604683439375 1.0572425240490624 0.9060548364002939 0.2638767126824292 0.10236754871463946 114.23521622573114 67836.93430725978 0.013560403141719416 0.025626899828481858 1.5720569875348269e-07 6.803531714706712 -0.15118768764876844 MDMT(ph)SPEQSR ddPTM_A549_PD325901_60min_R1 2 MDMTSPEQSR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 MDMT(0.562)S(0.437)PEQS(0.001)R;MDMT(0.5)S(0.5)PEQS(0.001)R 59.245 0.0026829999999999996 18201000.0 290.15 368.81 363.82 302.32 282.52 348.71 266.22 302.6 483.95 411.94 312.56 True False 319.60581440285944 399.8909130388076 388.51101302738743 320.9936197814639 262.67676984108874 345.87022137443194 276.35114778117367 296.56440561489217 463.6112644814586 385.93003809787956 274.1171014810867 1.1659462787107842 1.4588324146072984 1.4173176752862813 1.1710090981084285 0.9582648015093385 1.2617608296076923 1.0081499705345494 1.0818894699109252 1.691289094976245 1.4079020827692053 1.0 8.098648526885222 -11.3214720911435 1.9237651789277839 0.9984126812209272 1.3182021941920359 0.0 0.2438522697658161 0.5089489169222687 3.4015440477984566 0.19881666675906104 0.03856143118124671 4.7701046702751224e-12 11.3214720911435 0.3197895129711087 MDMTS(ph)PEQSR ddPTM_A549_MK2206_60min_R1 1 MDMTSPEQSR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 MDMT(0.204)S(0.793)PEQS(0.003)R 44.847 0.018567 6538100.0 3750.7 3818.2 3754.5 3412.4 4857.1 3584.7 3381.8 2885.0 5099.3 5750.9 5744.3 True False 4383.726464189077 4012.530071149209 4286.94455599339 4248.4381531884555 4142.627024161465 3964.0305746687204 3996.2292852717646 3293.957584941953 3944.316691908811 4451.767695826489 4317.831775385204 1.0152610597706748 0.9292928209995494 0.9928465903725352 0.9839285952286647 0.9594229788611649 0.9180604481319978 0.9255175961354473 0.7628730706276974 0.9134947578074482 1.0310192539702028 1.0 12.076091321087524 -7.0154928850765135 5.06402620581262 0.9364803759890581 0.9771739123849039 0.12097638668685551 0.06615447175405417 0.435143864945559 32.2011867970615 0.010281568999646938 0.018803457820207134 9.649551202625083e-08 7.0154928850765135 0.04069353639584583 MDMTS(ph)PEQSR ddPTM_A549_PD325901_60min_R1 5 MDMTSPEQSR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 MDMT(0.311)S(0.689)PEQSR;MDMT(0.204)S(0.794)PEQS(0.001)R;MDMT(0.35)S(0.649)PEQSR;MDMT(0.489)S(0.51)PEQS(0.001)R;MDMT(0.164)S(0.835)PEQS(0.001)R 59.542 0.0025428 29667600.0 1029.75 1195.69 1145.6799999999998 1038.0 1238.8 1210.93 941.59 1076.08 1036.05 1047.67 1117.47 True False 1134.2894619381157 1296.4549925744202 1223.432734333509 1102.1149025309594 1151.790961627994 1201.0685875625613 977.4227227078181 1054.6167402315712 992.5084214609255 981.5199374035188 980.0282742259728 1.1574048338901022 1.322875091127714 1.2483647324356812 1.1245745980149509 1.1752629918128428 1.2255448328887923 0.9973413506664258 1.0761084837725814 1.0127344767117148 1.0015220613698357 1.0 9.936679561958867 -7.638911825643472 0.7576126369588984 1.0021589966178674 1.2379934152578125 0.6974130798642532 0.059827751042415965 0.2301168413488822 0.26553102373335913 0.011327219517471395 0.022837126265522274 2.2966148801096236e-08 7.638911825643472 0.23583441863994503 MDRDPLGGLADMFGQMPGS(ph)GIGTGPGVIQDRFSPTMGR ddPTM_A549_PD325901_60min_R1 1 MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFSPTMGR 38 2 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 MDRDPLGGLADMFGQMPGS(0.282)GIGT(0.231)GPGVIQDRFS(0.231)PT(0.256)MGR 50.479 0.016881 12006000.0 3257.7 3507.0 3852.1 3706.8 4501.8 4737.5 4479.5 5171.8 4135.4 4522.6 4033.3 True False 3588.419305808014 3802.5471978175683 4113.526670559067 3935.7606172463943 4185.609098366893 4698.919370713117 4649.969823776458 5068.6443918013865 3961.603519240881 4237.0422641682535 3537.2296691952515 1.0144716745589235 1.0750071534604873 1.1629232634744149 1.112667535139671 1.1833014787866893 1.328417945725916 1.314579560459913 1.4329418403172403 1.1199735074432353 1.1978420007802928 1.0 11.788404179655657 -9.417280949541148 1.8356348400913678 1.0354016883726167 1.2015116470480725 0.04176926256605651 0.12645587375117714 0.32297364743331475 2.2175404242350116 0.028158821478443254 0.02389432268653184 3.8257717016329775e-10 9.417280949541148 0.16610995867545575 MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFS(ph)PTMGR ddPTM_A549_PD325901_60min_R1 1 MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFSPTMGR 38 2 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 MDRDPLGGLADMFGQMPGS(0.075)GIGT(0.089)GPGVIQDRFS(0.632)PT(0.204)MGR 46.31100000000001 0.026858999999999997 22226000.0 3376.0 3081.1 2988.3 3573.3 3822.9 4513.2 3618.1 4183.7 4122.5 4266.8 4082.9 True False 3718.729034720157 3340.755110121392 3191.1040081076962 3794.014625446891 3554.3926922890364 4476.44599554669 3755.7887754002863 4100.25282145084 3949.2456613799222 3997.3935198233585 3580.7291836355575 1.0385395945929892 0.9329817863325489 0.891188315131872 1.059564806739945 0.9926449362697177 1.25014927574101 1.048889369395702 1.1450887825277543 1.1029166012968916 1.1163629849730095 1.0 11.806037694077173 -6.35292803486569 7.179454319201391 1.0677206227565768 0.9524029095440855 0.35711011003934545 0.07689151425352389 0.2483448607491824 16.899298156633083 0.01117552074888263 0.02611345367476232 4.436821585675703e-07 6.35292803486569 -0.11531771321249129 MDRT(ph)PEKDK ddPTM_A549_MK2206_60min_R1 7 MDRTPEKDK 9 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK 95.094 0.00032108 353590100.0 51023.90000000001 55678.700000000004 49625.100000000006 44185.200000000004 40464.2 48939.6 46388.200000000004 54717.700000000004 36538.700000000004 75570.1 74583.7 True False 59635.48690541422 58512.50800704397 56662.68538703625 55010.57598354903 34511.9697826016 54118.355988522715 54816.33548141331 62474.10154092833 28262.742790314092 58498.76192428615 56062.50888459814 1.0637320393236571 1.0437012037311608 1.0107054877560606 0.9812364283729353 0.6155980256545913 0.9653216929681587 0.977771715394507 1.1143650682763437 0.5041291114618421 1.0434560116583957 1.0 15.774748688214832 -6.0814605980918826 0.619552176674354 0.8017180964233784 1.142226664992914 0.0 0.18887299263537324 2.269554497988268 1.0244791967145686 0.0404165400149641 0.45182714117819117 8.28971122299664e-07 6.0814605980918826 0.3405085685695356 MDRT(ph)PEKDK ddPTM_A549_PD325901_60min_R1 7 MDRTPEKDK 9 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK 93.959 0.00033221 573246000.0 63853.7 60541.99999999999 56872.3 57119.8 71537.7 59938.200000000004 57162.7 57537.299999999996 72985.5 72735.0 81986.20000000001 True False 70336.08061739046 65644.08681216756 60731.99627892224 60647.96031752203 66513.13874366714 59450.083171646904 59338.05782912966 56389.67341436134 69918.17324891305 68142.4996869672 71902.41715334235 0.9782158013879916 0.912960779498859 0.844644709918478 0.843475959760594 0.9250473263203127 0.8268161979153075 0.8252581787700215 0.7842528199587807 0.9724036550788326 0.9477080518954379 1.0 16.133752650304764 -8.895399701845015 7.907628239830333 0.9878792177386501 0.8667807589502969 0.4371701529257167 0.05299566896390816 0.13752452857688002 9.412086928988684 0.009227926021907935 0.009799790769700884 1.2723315548154085e-09 8.895399701845015 -0.12109845878835312 MDRT(ph)PPPPT(ph)LSPAAITVGR ddPTM_A549_MK2206_60min_R1 2 MDRTPPPPTLSPAAITVGR 19 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.635)LS(0.364)PAAITVGR;MDRT(1)PPPPT(0.626)LS(0.365)PAAIT(0.009)VGR 87.95200000000001 1.9534000000000002e-06 31087000.0 1594.16 1608.18 1202.6 1706.0700000000002 2611.0 1773.79 1682.97 1693.57 2668.8 2293.18 2640.9 True False 1863.2152345299976 1690.029492907844 1373.146763360674 2124.057226588394 2226.9253587707863 1961.4912804534918 1988.7438642834643 1933.638733840602 2064.3210611978584 1775.1490453173224 1985.0916448679184 0.9386041391826875 0.8513609420890456 0.6917296573741001 1.0700046177110991 1.1218249618490328 0.9881111965407537 1.0018398240831792 0.9740803346987339 1.0399122209469638 0.8942403490068768 1.0 10.954989897846165 -6.2791562848701306 24.967639814216817 1.0227117722040795 0.8296445043406292 0.5293586185755119 0.07671601136806333 353.0130320596359 497484.8376579594 0.009084080734221319 0.021149913586281325 5.258280082867855e-07 6.2791562848701306 -0.1930672678634503 MDRT(ph)PPPPT(ph)LSPAAITVGR ddPTM_A549_PD325901_60min_R1 1 MDRTPPPPTLSPAAITVGR 19 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.587)LS(0.379)PAAIT(0.033)VGR 79.408 7.9246e-05 18773000.0 1029.0 1105.2 1082.2 1079.5 1466.7 1134.3 852.5 1507.3 1318.1 1374.1 1357.7 True False 1133.4633224902375 1198.339082699737 1155.6445997972583 1146.1782632776199 1363.684051840312 1125.0626368759658 884.9423540058998 1477.2357190460248 1262.7048408162211 1287.3390914946272 1190.711507169413 0.9519210284485559 1.00640589721725 0.9705496191470288 0.9625994679452973 1.1452682229317606 0.944865847102201 0.7432046710538688 1.2406327730532678 1.0604624488915475 1.0811511300121048 1.0 10.217608195267513 -8.276412099219597 24.996714684033336 1.0452555463134654 0.9693897264932848 0.22033021554790122 0.10709267161721694 1459.9974294288963 2437437.5231188065 0.017480935472036295 0.02117569238974818 5.291610880608226e-09 8.276412099219597 -0.07586581982018059 MDRT(ph)PPPPTLS(ph)PAAITVGR ddPTM_A549_MK2206_60min_R1 3 MDRTPPPPTLSPAAITVGR 19 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.091)LS(0.909)PAAITVGR;MDRT(1)PPPPT(0.051)LS(0.939)PAAIT(0.01)VGR;MDRT(1)PPPPT(0.193)LS(0.776)PAAIT(0.031)VGR 85.537 2.7439e-05 35374000.0 2557.29 2871.8900000000003 2467.5 2406.23 4174.6 2958.31 2593.34 2625.56 4243.8 4220.5 4404.9 True False 2988.8980322622656 3018.0569341660184 2817.4286035194264 2995.7564580197677 3560.5218700591818 3271.3564006327533 3064.516309263312 2997.7411704402734 3282.5860759560364 3267.086118735448 3311.041760944637 0.9027062320740816 0.911512796294351 0.8509190783252509 0.9047776120966475 1.0753479198170453 0.9880142374584362 0.9255444450779166 0.9053770344427854 0.9914058211756042 0.9867245279936764 1.0 11.693069491690501 -4.087220879662047 0.2317343202659963 1.0029617006337448 0.6886086502939193 0.26206342263081783 0.05237107767531355 16.768120361811146 0.45453354201171786 0.0345828665421912 1.6602255106891162 8.18048627513997e-05 4.087220879662047 -0.3143530503398255 MDRT(ph)PPPPTLS(ph)PAAITVGR ddPTM_A549_PD325901_60min_R1 3 MDRTPPPPTLSPAAITVGR 19 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.078)LS(0.921)PAAIT(0.001)VGR;MDRT(1)PPPPT(0.218)LS(0.78)PAAIT(0.003)VGR;MDRT(1)PPPPT(0.343)LS(0.651)PAAIT(0.007)VGR 99.171 2.7337e-07 118182000.0 4823.300000000001 5872.790000000001 5782.799999999999 4990.339999999999 5862.580000000001 6200.530000000001 6040.76 5800.67 5880.889999999999 6998.38 7020.9 True False 5312.957865274207 6367.710623858299 6175.255582801321 5298.581967915556 5450.8126056030405 6150.034939459172 6270.6444274307105 5684.971086312416 5633.7366446458645 6556.501092448996 6157.373809152044 0.862861023213706 1.0341601502890112 1.0029041234467035 0.860526278271425 0.885249584409054 0.9988081169147205 1.0183959301139565 0.9232785376555392 0.9149577107487176 1.0648210252727726 1.0 12.588099440715421 -7.281327035581978 24.874289564859858 0.9631741851379064 0.9352607685115092 0.10403405667067878 0.06578804060481232 2237.5929286013948 2798641.456527411 0.009485403305023711 0.015175300501655206 5.232062996023482e-08 7.281327035581978 -0.027913416626397236 MDRT(ph)PPPPTLSPAAITVGR ddPTM_A549_MK2206_60min_R1 8 MDRTPPPPTLSPAAITVGR 19 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 1 MDRT(0.998)PPPPT(0.001)LSPAAITVGR;MDRT(0.999)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR 150.36 1.8056e-21 153672000.0 16823.7 18124.699999999997 18607.600000000002 16398.44 25489.100000000002 20152.3 21451.7 19382.1 28256.600000000002 24750.2 27018.199999999997 True False 19663.12926002553 19047.169813147033 21246.437480384233 20416.05853615393 21739.687155206597 22284.80300998589 25349.19621469758 22129.57203019183 21856.525216518072 19159.11263023957 20308.835275614525 0.9682056599097874 0.9378760305381759 1.0461672071315442 1.005279636132957 1.0704546499183112 1.0972959654039822 1.2481856231871247 1.0896524458378725 1.0762077155040943 0.9433880559977035 1.0 14.309819882094478 -5.952914748867782 1.4548646377752297 1.062475264324616 0.9470822689028341 0.24824199064295804 0.07344209769654131 0.570396810734882 2.0854655542189295 0.010929606612874702 0.06523801894932424 1.1145132888346193e-06 5.952914748867782 -0.11539299542178194 MDRT(ph)PPPPTLSPAAITVGR ddPTM_A549_PD325901_60min_R1 5 MDRTPPPPTLSPAAITVGR 19 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 1 MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR 158.67 5.8719999999999995e-27 236387000.0 12694.600000000002 11746.3 11178.099999999999 12624.7 13765.800000000001 13964.3 12399.4 13332.0 13947.7 14262.8 14603.7 True False 13983.34644672941 12736.20192464343 11936.713085375839 13404.499046226012 12798.93769743191 13850.57937064891 12871.265952212034 13066.082801248327 13361.526673433296 13362.244373895326 12807.537480481664 1.0918060140787913 0.9944301895702474 0.9320068829442867 1.0466101751920773 0.999328537350536 1.0814396906319277 1.0049758567427571 1.0201869657739187 1.043254934353766 1.0433109717038909 1.0 13.644705493307642 MDS(ph)DEDEKEGEEEK ddPTM_A549_MK2206_60min_R1 16 MDSDEDEKEGEEEK 14 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK 213.99 5.750599999999999e-39 1440456400.0 65824.37 66727.08 64335.09999999999 53495.939999999995 72101.1 56352.24999999999 46800.03 55936.81 51349.76999999999 86188.5 91844.9 True False 76933.91440466406 70123.20335759761 73458.78457964852 66602.44770152398 61495.12370174959 62315.407691403874 55302.98966159944 63866.024116796114 39719.12908373273 66718.45798948704 69037.2765397135 1.114382233204232 1.0157295720850088 1.064045226891179 0.9647316788809176 0.8907524569914732 0.9026342117588766 0.8010598394591443 0.9250947794856503 0.5753287365106938 0.9664120795829401 1.0 16.075087932129055 -6.761922993761165 0.9140806375055606 0.8060575964190403 1.0806711213234732 0.3446503724579558 0.11224395212568841 0.5609463343801662 0.8725412574898065 0.025410829612670202 0.09048438051054741 1.7301231060599514e-07 6.761922993761165 0.2746135249044329 MDS(ph)DEDEKEGEEEK ddPTM_A549_PD325901_60min_R1 16 MDSDEDEKEGEEEK 14 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK 182.17 4.8098e-26 2586547500.0 100157.4 95508.1 101981.5 90826.19999999998 116334.2 95325.9 108600.29999999999 103252.29999999999 107003.0 107223.7 117919.7 True False 110325.30551601906 103556.9027727062 108902.577854578 96436.32809273354 108163.28712320256 94549.59747560143 112733.1438448642 101192.85187663743 102506.0360229559 100453.57728308898 103416.32445456645 1.0668074513176873 1.0013593435937815 1.0530501681329993 0.9325058553507246 1.0459014830943985 0.9142618244679503 1.090090413089385 0.9784997911146431 0.9911978264900484 0.9713512621232339 1.0 16.65810441009691 -2.355691903533622 0.8948898339214223 0.9966132222053783 16.971900730936675 0.14958839039192895 0.04862669215866245 538.5244318619112 2.374126544530155 0.0062206534393535505 17434.440684918485 0.004408675120886031 2.355691903533622 15.975287508731297 MDS(ph)DEDEKEGEEEKVAK ddPTM_A549_MK2206_60min_R1 10 MDSDEDEKEGEEEKVAK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK 202.53 4.4668e-49 219379300.0 53988.299999999996 64351.700000000004 64288.9 51953.8 73805.6 46233.799999999996 45095.48 42110.12 84579.4 91232.3 99611.59999999999 True False 63100.205152792565 67626.92666166583 73406.03272494441 64682.48333229467 62948.89400968719 51126.23002848741 53288.74499065203 48079.35846683389 65422.30094554787 70622.86006641568 74875.29057969816 0.8427373658821122 0.9031941797899656 0.9803772667407566 0.8638695467024045 0.8407165237333353 0.6828184522912539 0.7117000091496252 0.6421258347659785 0.873750211038067 0.9432064906812463 1.0 16.192202076343374 -9.716714230582271 1.2666745084426387 0.9740654033331662 0.8149661020417539 0.2789917349155083 0.09641073723456552 0.3738921699121434 1.2189681365548402 0.02957114589550793 0.02054508826938691 1.9199316562799277e-10 9.716714230582271 -0.15909930129141225 MDS(ph)DEDEKEGEEEKVAK ddPTM_A549_PD325901_60min_R1 7 MDSDEDEKEGEEEKVAK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK 192.63 1.0741e-40 708023000.0 76243.8 79779.0 88023.90000000001 88767.9 93760.8 115745.6 105573.09999999999 116781.3 109750.5 112484.2 109520.9 True False 83984.01444828107 86502.25631442486 93997.73118471068 94250.89157647191 87175.36486520016 114803.00620893126 109590.74209231716 114452.00535834252 105138.06815264466 105381.92841532637 96050.52361018678 0.8743733119990408 0.9005911999552154 0.9786279933901538 0.9812636936679437 0.9075990592096538 1.1952356103216042 1.1409697518889357 1.191581274692855 1.0946121291263224 1.097151004017535 1.0 16.551505858174878 -7.233605414090804 24.964484554798258 1.075394365793112 0.9326582448660502 0.6459254073662068 0.06620735241826461 541.5176686527976 485691.22954754997 0.011841666833283433 0.020507890533123567 5.839754444992805e-08 7.233605414090804 -0.14273612092706178 MDS(ph)FDEDLAR ddPTM_A549_PD325901_60min_R1 2 MDSFDEDLAR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 MDS(1)FDEDLAR;MDS(1)FDEDLAR 69.34899999999999 0.0026363000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 MDS(ph)FDEDLARPSGLLAQER ddPTM_A549_MK2206_60min_R1 4 MDSFDEDLARPSGLLAQER 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 MDS(0.999)FDEDLARPS(0.001)GLLAQER;MDS(0.999)FDEDLARPS(0.001)GLLAQER;MDS(0.999)FDEDLARPS(0.001)GLLAQER;MDS(1)FDEDLARPSGLLAQER 86.546 4.6047e-06 20139900.0 3022.38 3366.7000000000003 2967.28 3201.4300000000003 4219.69 3488.36 3442.4700000000003 3072.09 5290.76 4746.65 5726.429999999999 True False 3532.483853903482 3538.0506496616294 3388.0849226549662 3985.7804937176534 3598.979190789543 3857.49593981404 4067.922238946564 3507.568165381045 4092.4113076076096 3674.3784683084014 4304.399389572113 0.8206682359590789 0.8219615164505764 0.7871214113780843 0.9259783149708761 0.8361164624984546 0.8961751897742699 0.9450615221258414 0.8148798120078076 0.950750833559249 0.853633256525868 1.0 12.071596231195707 -7.841142585908609 0.18527200872078065 1.046879409201282 0.7414928573955661 0.08815632698887099 0.06328989418412913 1.7590203139150384 0.19506733548781413 0.1016483016569454 0.17696362178012298 1.4416419594259235e-08 7.841142585908609 -0.30538655180571594 MDS(ph)FDEDLARPSGLLAQER ddPTM_A549_PD325901_60min_R1 2 MDSFDEDLARPSGLLAQER 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 MDS(0.999)FDEDLARPS(0.001)GLLAQER;MDS(1)FDEDLARPSGLLAQER 138.93 7.5828e-18 17592400.0 2327.1000000000004 2058.46 2232.5 2111.3900000000003 2940.5 2704.8 2740.3 2297.3 2667.58 2812.5 2876.3 True False 2563.3454788795243 2231.9336483659986 2384.010875113084 2241.8057649853977 2733.9694241742945 2682.7730055735833 2844.583616049699 2251.4785493030136 2555.470889359332 2634.9182700157457 2522.5333343679613 1.016179030800316 0.8847984753887209 0.9450859747351623 0.8887120477030676 1.083818947771927 1.06352331167341 1.1276693858883848 0.8925465993364712 1.0130573319062297 1.0445524085317759 1.0 11.300657618814173 -6.750557555327547 24.99994035853147 1.0157970407568522 0.9310150775999586 0.32610784854979913 0.06541561140410741 216.8856138925873 498270.51517908886 0.008968502202794118 0.018522814825499556 1.7759978867260764e-07 6.750557555327547 -0.08478196315689357 MDS(ph)SLPEEEEDEDKEAINGSGNAENR ddPTM_A549_MK2206_60min_R1 1 MDSSLPEEEEDEDKEAINGSGNAENR 26 1 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 MDS(0.5)S(0.5)LPEEEEDEDKEAINGSGNAENR 47.428999999999995 0.0025945 4016000.0 988.16 749.51 602.02 866.71 918.03 1007.5 889.43 672.17 955.23 1115.8 1138.3 True False 1154.937249807524 787.656857583951 687.3954885068961 1079.0539889080899 782.9890031069871 1114.1129812756258 1051.0279180315997 767.4521559342911 738.8719301888603 863.7400050432448 855.6286945182134 1.3498112641697284 0.9205591895529686 0.8033805936042784 1.2611241252441663 0.9151037221208106 1.3020986654765705 1.2283691801890908 0.8969453231888481 0.8635427200170089 1.00947994214897 1.0 9.740841055570066 -8.284915286603209 24.436050575674198 0.9308651165469202 1.0978310303967218 0.1826429968042801 0.1697812992367204 763.8160455589921 795053.0798187423 0.027404492079466353 0.0331417679684261 5.189012458335747e-09 8.284915286603209 0.16696591384980164 MDS(ph)SLPEEEEDEDKEAINGSGNAENR ddPTM_A549_PD325901_60min_R1 1 MDSSLPEEEEDEDKEAINGSGNAENR 26 1 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 MDS(0.527)S(0.473)LPEEEEDEDKEAINGSGNAENR 87.25 4.8563e-09 6383100.0 964.8 1117.2 1156.7 1043.6 1140.0 1341.0 1065.1 1364.3 1300.5 1315.0 1218.4 True False 1062.745785751779 1211.3503648137405 1235.2006178021522 1108.060801812436 1059.930332786498 1330.0793406071332 1105.6329633450835 1337.0879662273542 1245.8445076105725 1231.9706755806953 1068.5445240739582 0.9945732365928275 1.1336451944887775 1.1559655119402952 1.0369814049374537 0.991938388065836 1.2447579961722524 1.0347093063840906 1.2513170355593053 1.165926622187568 1.152942762631598 1.0 10.061431308076205 -3.7015994148648677 16.669570869790643 1.0936399606569047 1.0023334239265722 0.0 0.09416362900782774 0.0 0.0 0.012632437237893913 0.0 0.000198792769942165 3.7015994148648677 -0.09130653673033251 MDSNFGLAGLPGS(ph)PK ddPTM_A549_MK2206_60min_R1 5 MDSNFGLAGLPGSPK 15 0 O43463;O43463-2 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 1 MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK 118.48 2.6857e-07 28799100.0 10887.0 14163.199999999999 12715.000000000002 11532.640000000001 16226.6 11883.9 12111.3 12450.599999999999 19000.0 17491.8 18895.3 True False 12724.45943840523 14884.046384081623 14518.178194022099 14358.137317719878 13839.688635247037 13141.446410105618 14311.766438793511 14215.51067836335 14696.530336765327 13540.390231417294 14203.075526249677 0.8958946542872552 1.0479453099135745 1.0221855236346564 1.0109174798925502 0.9744149152533168 0.9252535752427713 1.0076526321600525 1.0008755253107462 1.0347428139492507 0.9533421269493618 1.0 13.793915743507297 -7.980075704467128 24.941449703075637 1.0151553762775858 0.984091828733738 0.0 0.044944897171946795 403.4129137693391 504995.32780184207 0.006363108015187335 0.008791438209936027 1.0469460327226268e-08 7.980075704467128 -0.03106354754384777 MDSNFGLAGLPGS(ph)PK ddPTM_A549_PD325901_60min_R1 4 MDSNFGLAGLPGSPK 15 0 O43463;O43463-2 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 1 MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK 156.13 6.722100000000001e-20 46809700.0 13930.0 14421.900000000001 13249.099999999999 14897.599999999999 17360.2 15523.099999999999 14210.5 15850.3 16469.2 16318.7 16963.6 True False 15344.163345275996 15637.284126662453 14148.263599310529 15817.790917095568 16140.879441438727 15396.685020267398 14751.288353783973 15534.153332180205 15777.056797185745 15288.33449703324 14877.184741120309 1.0313889094127444 1.0510916143590825 0.9510040942225411 1.0632247426070767 1.0849417898821667 1.0349192598053312 0.9915376202200165 1.0441594698521184 1.0604867165209158 1.0276362606949767 1.0 13.860813925868275 -11.080817064265972 1.4226775796108762 1.0001217047873512 1.0374236234779972 0.025483707095113273 0.03564148652363775 0.7118809068915205 2.586827884754471 0.02492517366866825 0.005559642428414432 8.302003951128882e-12 11.080817064265972 0.03730191869064603 MDSTANEVEAVK ddPTM_A549_PD325901_60min_R1 1 MDSTANEVEAVK 12 0 H7BZ94;P07237;H0Y3Z3;I3L0S0 H7BZ94 P4HB Protein disulfide-isomerase 0 58.781000000000006 0.0031511 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 MDY(ph)VEINIDHK ddPTM_A549_PD325901_60min_R1 1 MDYVEINIDHK 11 0 Q00341;A0A024R4E5;Q00341-2;H0Y394;H7C0A4 Q00341 HDLBP Vigilin 1 MDY(1)VEINIDHK 58.172 0.004919 1101300.0 521.1 479.69 624.55 534.45 422.04 778.18 557.4 506.3 652.67 653.24 684.33 True False 574.0016883864552 520.1151597722014 666.9357187242452 567.4617626759837 392.39736635895923 771.842760084757 578.6121620209832 496.2014493153336 625.2405496210631 611.9943149173642 600.1617483252884 0.9564116506727875 0.8666249743899013 1.1112599571453616 0.9455147120912789 0.6538193536224495 1.2860579039542808 0.9640937024653139 0.8267795318511233 1.0417867372683371 1.019715629370072 1.0 9.229207560593606 -7.259404317154382 24.99853761574484 1.0161214107197607 0.9180162174144466 0.13823304773446599 0.14281872172561838 340.4248108792525 4181744.234669098 0.020290658202356582 0.03403735940962208 5.502951470238969e-08 7.259404317154382 -0.09810519330531409 MEDLT(ph)NPEDIR ddPTM_A549_MK2206_60min_R1 2 MEDLTNPEDIR 11 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 MEDLT(1)NPEDIR;MEDLT(1)NPEDIR 78.488 0.0011106 8703500.0 1752.24 2052.62 1886.46 1757.83 2478.3 2274.1000000000004 1743.01 1791.6799999999998 2976.3 2761.2 2680.99 True False 2047.9752738450618 2157.089590551119 2153.988394486427 2188.498428911988 2113.745352984158 2514.7437525745922 2059.6923551131163 2045.6561267898776 2302.1728021744543 2137.443002263315 2015.226191440205 1.0162508221379618 1.0703957698215154 1.0688568874479811 1.0859815330942835 1.0488873963441023 1.2478717095163403 1.022065098132301 1.01510000985444 1.1423892821327315 1.0606466963074583 1.0 10.976726062350723 -5.253807936720109 4.02861078560226 1.0740606107591961 1.0107136869761144 0.06373591410643886 0.06573188386146003 0.6794800986088979 22.817207741190586 0.009785620151886613 0.12597884049113234 5.574322143917654e-06 5.253807936720109 -0.06334692378308171 MEDLT(ph)NPEDIR ddPTM_A549_PD325901_60min_R1 1 MEDLTNPEDIR 11 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 MEDLT(1)NPEDIR 59.418 0.010081999999999999 6019000.0 1035.6 1124.2 746.34 1014.6 1322.3 1133.6 1202.1 1143.1 1132.5 1306.4 1402.6 True False 1140.7333496315732 1218.9402793802428 796.9911205070104 1077.269537676214 1229.4262096873556 1124.368337443882 1247.8465733143596 1120.2999737553982 1084.9049633748366 1223.913681048382 1230.089091813964 0.9273583167454795 0.9909365813355191 0.647913330677308 0.8757654586527607 0.9994611104748268 0.9140543924227637 1.0144359312008933 0.9107470192287748 0.8819726722191886 0.9949797044728887 1.0 10.264547094261939 -6.574780578051785 9.410771164198525 0.9464811375609135 0.8512314195273928 0.21848195222211098 0.08830963820773002 0.4335690594780318 74.69416321062737 0.01270933947805763 0.02650109341251054 2.6620696980794536e-07 6.574780578051785 -0.09524971803352067 MEEES(ph)QSQGRDLTLEENQVK ddPTM_A549_MK2206_60min_R1 1 MEEESQSQGRDLTLEENQVK 20 1 G8JLG1;Q14683 G8JLG1 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A 1 MEEES(0.5)QS(0.5)QGRDLT(0.001)LEENQVK 88.01700000000001 1.1028e-06 5136900.0 1663.3 2284.7 2062.7 2048.5 2711.5 2109.5 1661.6 1808.5 2885.5 2689.8 2906.8 True False 1944.0243762192913 2400.981471257291 2355.221876587445 2550.382591960658 2312.6419419023296 2332.725889827229 1963.4912119012245 2064.8604132989667 2231.93885719665 2082.172311852768 2184.9613364012507 0.889729417098613 1.0988667997264598 1.0779238228840344 1.1672438086072845 1.0584360937532082 1.0676279945847253 0.8986388816999391 0.9450329298274465 1.0215003899669794 0.9529561357283411 1.0 11.093392035657665 -7.615077945221988 24.925295134238173 0.9962891768259762 1.0673933979934422 0.2550126157428768 0.07224110682498018 21.74241023929727 5868.189956366231 0.010729861869587316 0.01591495707805902 2.426174617087188e-08 7.615077945221988 0.07110422116746606 MEELNS(ph)EK ddPTM_A549_MK2206_60min_R1 1 MEELNSEK 8 0 P35573-2;P35573-3;P35573 P35573-2 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase 1 MEELNS(1)EK 45.394 0.017769 16093000.0 4536.4 5313.7 5141.2 4024.8 7986.0 5598.2 5605.7 5533.1 8404.4 8130.6 8973.2 True False 5302.033415668366 5584.144633352247 5870.299467645017 5010.87618068014 6811.269978990226 6190.597808215595 6624.183128643897 6317.433869408083 6500.816819068975 6293.89181305306 6744.906792278691 0.786079567732193 0.8279053818423052 0.8703307026221785 0.7429125909369716 1.0098390072324654 0.9178181402450739 0.9821015075000009 0.9366228569147965 0.9638112162663033 0.9331325112243307 1.0 12.719582791401765 -6.769163175911369 24.999999899109117 0.9754671007550285 0.8128514823380731 0.7753691955023867 0.04014333509397548 52.111797786426564 168673.40301217558 0.005360754498890117 0.010265820787199275 1.70151908260263e-07 6.769163175911369 -0.16261561841695538 MEES(ph)DEEAVQAK ddPTM_A549_MK2206_60min_R1 4 MEESDEEAVQAK 12 0 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 MEES(1)DEEAVQAK;MEES(1)DEEAVQAK;MEES(1)DEEAVQAK;MEES(1)DEEAVQAK 74.46 0.00046986 12936400.0 5950.04 6125.1 5422.88 5426.01 7659.4 6028.72 5464.9 6174.699999999999 8197.7 7513.9 7758.400000000001 True False 6954.261287488625 6436.841427582638 6191.925927235435 6755.382693582846 6532.712406345828 6666.675148859547 6457.801591188616 7049.982634225675 6340.934039036904 5816.504771369813 5831.7751590530725 1.1924776072158816 1.1037533601737506 1.0617566278465442 1.1583750246433957 1.1201927763289437 1.1431639538623846 1.1073474911260457 1.208891365312926 1.0873077006738556 0.9973815198174172 1.0 12.509719383069713 -9.757507383631934 0.885961561223965 1.0115200145897785 1.1321164238853771 0.598759889923286 0.04172067289695799 0.2573000809406744 0.4205409672057867 0.014463809747996456 0.008438765621838339 1.747803546987043e-10 9.757507383631934 0.12059640929559867 MEES(ph)DEEAVQAK ddPTM_A549_PD325901_60min_R1 3 MEESDEEAVQAK 12 0 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 MEES(1)DEEAVQAK;MEES(1)DEEAVQAK;MEES(1)DEEAVQAK 105.65 5.6498e-05 14425000.0 6257.799999999999 6293.200000000001 6608.7 7787.4 7967.4 8187.900000000001 6643.3 7404.4 7849.7 7088.3 7897.0 True False 6893.087249251121 6823.550049987319 7057.206123341478 8268.410011531394 7407.797310037846 8121.220457089591 6896.114416853252 7256.713433360566 7519.80440706706 6640.7435283031555 6925.719063207522 0.995288313941327 0.9852478836799821 1.018985329744672 1.1938702589680312 1.069606959570644 1.1726176564442385 0.9957254046714741 1.0477920584320888 1.0857795903122294 0.9588525707867243 1.0 12.757748151501636 -6.0081713041367895 24.76213058899307 1.0600252971667607 0.9932301961355138 0.16381385004899163 0.06710754148524903 483.2397221581008 1464419.534195751 0.008945142558644656 0.026083099829835556 9.813607764149969e-07 6.0081713041367895 -0.06679510103124697 MEES(ph)FSSK ddPTM_A549_MK2206_60min_R1 4 MEESFSSK 8 0 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 MEES(0.995)FS(0.004)S(0.001)K;MEES(0.999)FSSK;MEES(0.992)FS(0.007)S(0.001)K;MEES(0.999)FS(0.001)SK 91.65799999999999 0.00092439 140306000.0 25418.300000000003 26762.899999999998 24103.4 23613.9 32438.800000000003 25981.6 23827.800000000003 26617.2 37248.0 36923.1 37093.1 True False 29708.28762222979 28125.01729641171 27521.62456010949 29399.306560068246 27667.095491418528 28730.955666809718 28157.002827960998 30390.269611756277 28811.387472833405 28582.14606579334 27881.85955252004 1.0655059633404067 1.0087210016761488 0.9870799509719935 1.05442416796806 0.9922973551783026 1.0304533531090445 1.0098681823901552 1.089965665830546 1.0333380891816935 1.0251162054652128 1.0 14.76703916305617 -6.7732096209048445 24.998368911770363 1.0211178223586055 1.0244995945035764 0.0 0.031074444993026053 2827.648380595481 6005568.791606508 0.0046139978503614365 0.00878705730433407 1.6857391733162137e-07 6.7732096209048445 0.0033817721449709293 MEES(ph)FSSK ddPTM_A549_PD325901_60min_R1 2 MEESFSSK 8 0 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 MEES(0.999)FS(0.001)SK;MEES(0.995)FS(0.004)S(0.001)K 74.84100000000001 0.0017567999999999998 278320000.0 25389.0 22731.0 25302.0 23852.0 26972.0 24045.0 27026.0 25740.0 27654.0 26572.0 25835.0 True False 27966.472589606044 24646.62114445145 27019.14587328614 25325.283868177685 25077.57976834859 23849.185492094348 28054.489219194656 25226.595507360642 26491.798549375453 24894.23938519412 22657.458781558355 1.2343163838112714 1.0877928271687793 1.1925055732762893 1.1177459975692756 1.106813434380384 1.052597545118607 1.2382010484789725 1.1133903298940742 1.169230795244257 1.098721600917414 1.0 14.467698439788498 -10.78625154354968 0.8896663209412192 0.9942945281714662 1.144086927605968 0.20577612529709843 0.06279772417336625 0.42772890424284565 0.5630444394085308 0.04374113474391241 0.009455635948306354 1.6358687510994646e-11 10.78625154354968 0.14979239943450173 MEESFS(ph)SK ddPTM_A549_MK2206_60min_R1 2 MEESFSSK 8 0 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 MEES(0.215)FS(0.782)S(0.003)K;MEES(0.038)FS(0.899)S(0.063)K 150.27 0.0006436 82695000.0 31351.0 31854.0 29300.0 26394.0 40104.0 31993.0 30149.0 29819.0 48557.0 44252.0 43008.0 True False 36642.2823416407 33475.23254056543 33455.180580798056 32860.53118487169 34204.75472544755 35378.47802476535 35626.683045022866 34045.93456685756 37558.917029595475 34255.44246565122 32327.92663958476 1.1334559976628107 1.035489622139139 1.0348693547155294 1.0164750604399964 1.0580559374186609 1.0943627291409794 1.1020404569156272 1.0531431522480983 1.1618102654194191 1.0596238616709266 1.0 14.980493362339505 -7.064853349907127 7.733821274325662 1.079417633215791 1.0504093447975467 0.053928897103134976 0.04614820794537874 0.8597447461910969 93.120861110312 0.009234835110615142 0.016082454470826967 8.612845367549225e-08 7.064853349907127 -0.02900828841824432 MEESFS(ph)SK ddPTM_A549_PD325901_60min_R1 2 MEESFSSK 8 0 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 MEES(0.206)FS(0.749)S(0.045)K;MEES(0.205)FS(0.733)S(0.062)K 150.27 0.0006436 82093000.0 18379.1 18031.5 18803.0 18554.9 21211.1 17435.8 20874.1 21068.7 21275.5 19493.2 21993.2 True False 20244.932702021688 19551.07778655476 20079.084651624333 19700.994031764636 19721.30551032253 17293.808625621066 21668.4752982458 20648.46825042459 20381.36472254421 18262.39602526968 19288.175826381612 1.0496032846367702 1.0136302137920976 1.0410048535621987 1.0214026566897212 1.0224557100598648 0.8966015646729678 1.123407184447609 1.0705246797979944 1.0566766347425856 0.946818205601957 1.0 14.23542908692421 MEESFS(ph)SKYVPK ddPTM_A549_PD325901_60min_R1 1 MEESFSSKYVPK 12 1 P42167;G5E972;H0YJH7;P42167-2 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 MEES(0.077)FS(0.74)S(0.181)KY(0.002)VPK 46.926 0.0083079 6133400.0 2680.1 3642.7 3557.6 3511.1 3756.0 3252.1 3462.9 3829.7 3700.5 4629.0 3385.8 True False 2952.1817790146592 3949.6831130567634 3799.0401295866995 3727.9726727133443 3492.1915174965648 3225.615975830318 3594.6825544715916 3753.3136291584706 3544.98085383539 4336.724150009915 2969.36806435457 0.9942121404395025 1.33014265239472 1.2794103146699227 1.2554767856047737 1.1760722961286503 1.0862971197649243 1.210588406881429 1.264010910002934 1.1938502661191437 1.4604872336540595 1.0 11.53594021655442 -10.52897124658766 0.6582748361953693 0.9855324455478583 1.207085709924456 0.0 0.16329488268033152 0.6609509240398688 0.46891970357534235 0.0806415095865814 0.01814896099263326 2.958208314694499e-11 10.52897124658766 0.22155326437659772 MEGAEINKS(ph)LLALK ddPTM_A549_PD325901_60min_R1 2 MEGAEINKSLLALK 14 1 Q99661-2;Q99661 Q99661-2 KIF2C Kinesin-like protein KIF2C 1 MEGAEINKS(1)LLALK;MEGAEINKS(1)LLALK 69.52199999999999 0.00063226 12856700.0 6513.1 6182.9 7363.1 6600.6 8312.3 7619.2 7569.3 8331.099999999999 7865.7 7544.299999999999 7948.6 True False 7174.305117309198 6703.954681889433 7862.8042439172 7008.304070949753 7728.472723878248 7557.151761337712 7857.353853579892 8164.929674878478 7535.131982708559 7067.951610481706 6970.972590326875 1.0291684588266024 0.961695745467718 1.1279350394847136 1.0053552757723763 1.108664913501812 1.0840885778010712 1.1271531700587927 1.1712755385393958 1.080929796390898 1.0139118349553407 1.0 12.767144239658654 -5.744806016406291 24.989902416159712 1.0637781945013403 0.9954321114341667 0.21222532561921015 0.056127714417506656 350.4126063560792 526450.0745008943 0.00854235920717787 0.032888551763735605 1.7996745849953427e-06 5.744806016406291 -0.0683460830671736 MEGS(ph)DFESSGGR ddPTM_A549_MK2206_60min_R1 4 MEGSDFESSGGR 12 0 A0A1B0GW41;Q8WYH8-2;Q8WYH8;E9PEN0 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 MEGS(0.992)DFES(0.008)SGGR;MEGS(1)DFESSGGR;MEGS(1)DFESSGGR;MEGS(0.852)DFES(0.148)SGGR 199.4 1.4237000000000001e-24 48588700.0 5822.299999999999 5954.5 5065.54 4429.44 7593.05 6026.34 4733.96 5746.8099999999995 7728.250000000001 7629.860000000001 7798.820000000001 True False 6804.9618984317785 6257.558616274147 5783.909741954128 5514.652998845116 6476.122403452512 6664.0432988392595 5594.059254629226 6561.4379163675085 5977.813714479295 5906.269326832093 5862.157757517824 1.1608288585725743 1.0674497130769378 0.9866520112899813 0.9407206743579943 1.1047335590972998 1.136790167458914 0.9542662422305541 1.1192871614471487 1.0197292467629602 1.0075248007881907 1.0 12.517216077821947 -5.680124579734866 0.008362590704973319 1.759279879271107e-06 2.125792984960162 0.08889256014884628 0.06931755972929853 10952.580648725538 15.280989346634597 1834.7864547382862 2054.207939003009 2.0886968908440543e-06 5.680124579734866 2.125791225680283 MEGS(ph)DFESSGGR ddPTM_A549_PD325901_60min_R1 4 MEGSDFESSGGR 12 0 A0A1B0GW41;Q8WYH8-2;Q8WYH8;E9PEN0 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 MEGS(1)DFESSGGR;MEGS(1)DFESSGGR;MEGS(0.999)DFES(0.001)SGGR;MEGS(0.999)DFES(0.001)SGGR 149.83 3.7535e-12 60286100.0 7358.200000000001 7463.2 6250.7 6452.73 7824.799999999999 6399.9 6747.799999999999 7029.5 8342.3 7787.400000000001 8188.299999999999 True False 8105.1990471794625 8092.150056102676 6674.910090512589 6851.3004768868905 7275.21304209455 6347.781336280082 7004.591221537841 6889.291107963933 7991.7021421297095 7295.702234994 7181.1910099103625 1.1286705834720074 1.1268534766635714 0.9294990317484825 0.9540618634752636 1.0130928187336101 0.883945480285911 0.9754080084865023 0.9593521601718163 1.112865836753375 1.0159459934884905 1.0 12.810007421411706 -11.6265656770716 3.3381566471242006 0.999075778054238 1.029347821088032 0.0 0.08058495526109895 1.393051907956456 28.590216609698228 0.08459681760792565 0.012752906146961167 2.3628400468135368e-12 11.6265656770716 0.03027204303379405 MEHYT(ph)SRDMDELLAEIQK ddPTM_A549_MK2206_60min_R1 1 MEHYTSRDMDELLAEIQK 18 1 H3BUS3;A6NCI4 H3BUS3 VWA3A von Willebrand factor A domain-containing protein 3A 1 MEHY(0.004)T(0.498)S(0.498)RDMDELLAEIQK 40.012 0.05993300000000001 160070000.0 7371.2 7515.6 6562.8 5968.7 8963.2 6814.3 6368.4 7620.0 11665.0 11693.0 12615.0 True False 8615.278351462532 7898.111938276929 7493.503724084014 7431.031767945126 7644.725153479242 7535.384703033745 7525.455846095183 8700.158335271293 9022.896125177243 9051.543178858807 9482.347343711916 0.9085596676835122 0.8329279293396114 0.7902583033992342 0.7836700659223278 0.806205982166297 0.7946750345557346 0.7936279460470916 0.91751103602429 0.9515466791206134 0.9545677721731223 1.0 13.211028525424409 -8.5173925169246 2.0856794962366636 0.9789340048744752 0.8125980252573549 0.7848659114308301 0.0356784264978049 0.09713741007541406 0.8337362231684581 0.006675224290223314 0.007852507295675258 3.038137904400178e-09 8.5173925169246 -0.16633597961712032 MEHYT(ph)SRDMDELLAEIQK ddPTM_A549_PD325901_60min_R1 1 MEHYTSRDMDELLAEIQK 18 1 H3BUS3;A6NCI4 H3BUS3 VWA3A von Willebrand factor A domain-containing protein 3A 1 MEHY(0.004)T(0.549)S(0.447)RDMDELLAEIQK 54.672 0.013304 283370000.0 3614.8 3967.3 4117.2 4565.2 6042.3 5905.3 5205.0 4606.5 5226.8 5496.4 5361.6 True False 3981.771834924888 4301.638294240562 4396.617950734866 4847.182035678547 5617.909692803379 5857.209194695975 5403.079123285291 4514.619743770659 5007.135772686619 5149.356365978509 4702.157189982709 0.8467968368661726 0.9148223082385684 0.935021474845896 1.0308421943028179 1.194751571634303 1.2456430012960742 1.1490639093894603 0.960116721190952 1.064859291253305 1.0951051098309719 1.0 12.199107052793384 -6.15980368767943 2.601220944004294 1.0622827385258067 0.8852030208663292 0.5011432669945242 0.08353457815949578 0.23855303425605898 3.1104074983375067 0.013638037274705082 0.04323716045352193 6.921437670735281e-07 6.15980368767943 -0.1770797176594775 MEHYTS(ph)RDMDELLAEIQK ddPTM_A549_MK2206_60min_R1 1 MEHYTSRDMDELLAEIQK 18 1 H3BUS3;A6NCI4 H3BUS3 VWA3A von Willebrand factor A domain-containing protein 3A 1 MEHY(0.001)T(0.151)S(0.848)RDMDELLAEIQK 61.703 0.011341 139670000.0 2717.3 3005.0 2053.0 2061.2 2713.4 2869.8 2008.1 2482.2 3721.1 3396.5 4223.9 True False 3175.913808393363 3157.941664607242 2344.14627072964 2566.194092530783 2314.262454419246 3173.4803311809333 2372.9457767325766 2834.0594514186855 2878.276791375658 2629.228291028302 3174.9890562905052 1.0002912615087682 0.9946307242699033 0.7383163309130963 0.808252893800205 0.728904072860998 0.9995248093512061 0.7473870727305766 0.8926202267701218 0.9065469960197247 0.8281062530968714 1.0 11.632535903802756 -9.699710455498058 0.7254415930339116 0.9905831172250513 0.858168897167413 0.0 0.10958340255768775 0.6897926427518507 0.7713185664426424 0.040656195850852735 0.021981178154968483 1.9965930015937467e-10 9.699710455498058 -0.13241422005763837 MEIGDTLSTAEES(ph)SPPK ddPTM_A549_PD325901_60min_R1 2 MEIGDTLSTAEESSPPK 17 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDTLSTAEES(0.5)S(0.5)PPK;MEIGDTLST(0.001)AEES(0.614)S(0.385)PPK 189.99 1.3368e-39 17123600.0 6299.4 5869.5 5942.9 6036.299999999999 6681.5 5478.5 6319.1 6516.0 6630.7 6744.9 6156.299999999999 True False 6938.910450626823 6364.143364012041 6346.22093156083 6409.148541568044 6212.214489923667 5433.884912390889 6559.576808444201 6386.033268296888 6352.034737880377 6319.025862908162 5399.114128001068 1.285194253375755 1.1787384398870375 1.175418926347166 1.1870740994950821 1.1505988468933581 1.0064400906455175 1.2149357566688028 1.182792790983511 1.1764957337977429 1.170381976209063 1.0 12.398506997867283 -14.999999999959392 0.22656883704768377 0.05301045541371301 1.1926541839676474 0.0 0.08102573809896423 27.009985270988054 0.3361269216659643 11.388263799249481 0.04015363023176307 1.0000000000935022e-15 14.999999999959392 1.1396437285539345 MEIGDTLSTAEES(ph)SPPKSR ddPTM_A549_MK2206_60min_R1 1 MEIGDTLSTAEESSPPKSR 19 1 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDTLSTAEES(0.5)S(0.5)PPKS(0.001)R 89.462 1.5815e-06 9762100.0 3455.3 4308.1 3416.5 3221.8 4726.3 3432.1 3083.1 3970.9 5735.1 5423.2 5648.6 True False 4038.470166025679 4527.363888617124 3901.0110735254802 4011.1411446320976 4031.0675308917516 3795.2825439564017 3643.2593617071884 4533.7872353712255 4436.1090070727805 4198.095353424022 4245.896726570837 0.9511465836540296 1.0662915704672853 0.918772010895352 0.9447100113223108 0.9494031038638591 0.8938706681689901 0.8580659390294771 1.0678044067814387 1.0447990831504672 0.9887417485103501 1.0 12.051853565496506 -8.281307447900499 24.98794802621631 1.025244917172096 0.943070263208386 0.38188064278123857 0.0519542823265179 680.1962627800899 855476.784473508 0.008797961163353817 0.010642576703746685 5.232298979437695e-09 8.281307447900499 -0.08217465396371004 MEIGDTLSTAEESS(ph)PPK ddPTM_A549_MK2206_60min_R1 4 MEIGDTLSTAEESSPPK 17 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDT(0.008)LS(0.046)T(0.046)AEES(0.311)S(0.589)PPK;MEIGDT(0.032)LS(0.194)T(0.194)AEES(0.194)S(0.385)PPK;MEIGDTLSTAEES(0.119)S(0.881)PPK;MEIGDTLSTAEES(0.031)S(0.969)PPK 169.04 9.4082e-30 17217400.0 5430.84 6584.799999999999 5537.0 5390.8 8175.1 6672.8 6253.620000000001 6325.7 9749.8 8134.9 8827.7 True False 6347.4330207098965 6919.9381940451785 6322.2298592450115 6711.546242002212 6972.5536194894885 7378.9112669538445 7389.82180583157 7222.387346643775 7541.485867231294 6297.220440066581 6635.538457874403 0.9565814531867249 1.0428600840724958 0.9527832442508735 1.0114546520392194 1.0507894218012026 1.1120290107274233 1.113673268981217 1.088440281447387 1.1365295996863376 0.9490142329886824 1.0 12.695997826216157 -6.77144426004449 2.9970751258772492 1.0751361575195826 0.9893473668884818 0.2887128702842545 0.055480807257566746 0.23331631909992429 4.312176969871754 0.008158431176419977 0.01728878686050105 1.6926054696218937e-07 6.77144426004449 -0.08578879063110079 MEIGDTLSTAEESS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 MEIGDTLSTAEESSPPK 17 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDTLS(0.001)T(0.001)AEES(0.156)S(0.841)PPK 120.7 3.0316e-10 8576600.0 1919.8 2595.2 2281.4 2288.2 2917.1 2291.5 1965.3 2336.4 2504.7 2478.9 2412.8 True False 2114.696682717936 2813.9066118551937 2436.2295231726725 2429.5369171207512 2712.212959448677 2272.838783744403 2040.0905669534252 2289.7986691296587 2399.436169328875 2322.38183094828 2116.04089599938 0.9993647508023187 1.3297978395290986 1.1513149522670596 1.1481521560921017 1.2817393863116866 1.074099649038668 0.9641073434877616 1.0821145628417617 1.133927124879905 1.0975127349093352 1.0 11.047151794857577 -7.416941791310112 8.37319762879656 1.0580771075056692 1.1864425845732887 0.3229881947731056 0.08915245041291686 0.2871683238941308 20.66893959411931 0.013248349265479983 0.021189995731261298 3.828760569326054e-08 7.416941791310112 0.12836547706761947 MEISAELPQT(ph)PQR ddPTM_A549_MK2206_60min_R1 3 MEISAELPQTPQR 13 0 H3BS20;H3BNQ6;A0A087WTJ9;Q8IWV7-2;Q8IWV7 H3BS20 UBR1 E3 ubiquitin-protein ligase UBR1 1 MEIS(0.001)AELPQT(0.999)PQR;MEIS(0.026)AELPQT(0.974)PQR;MEISAELPQT(1)PQR 138.55 9.014799999999999e-09 14946700.0 6992.2 8887.3 8257.2 7088.599999999999 10346.9 8254.2 8463.4 8483.5 12817.599999999999 11936.4 13991.5 True False 8172.312417122901 9339.625609272527 9428.195122585865 8825.30731821935 8824.884716455552 9127.653965305479 10001.090227975941 9686.062104629129 9914.434065501222 9239.958949810167 10517.024404244561 0.7770555722799921 0.8880482967694885 0.8964698340702475 0.8391448929848967 0.8391047103488626 0.8678932000596721 0.950942951500579 0.9209888398395211 0.942703343114794 0.8785715992140339 1.0 13.360438958278758 -8.185249985170996 0.2905927606547935 1.0094767238672668 0.8153718887610732 0.32800979948358433 0.04826925895652391 0.6080469747888416 0.14910086556456079 0.028237555400137147 0.04208133773125397 6.5275471095996115e-09 8.185249985170996 -0.19410483510619359 MEISAELPQT(ph)PQR ddPTM_A549_PD325901_60min_R1 3 MEISAELPQTPQR 13 0 H3BS20;H3BNQ6;A0A087WTJ9;Q8IWV7-2;Q8IWV7 H3BS20 UBR1 E3 ubiquitin-protein ligase UBR1 1 MEISAELPQT(1)PQR;MEISAELPQT(1)PQR;MEIS(0.006)AELPQT(0.994)PQR 111.95 1.8089000000000002e-05 30429500.0 12730.2 12691.0 12337.8 14006.199999999999 14645.9 13000.3 12955.099999999999 13714.3 14389.000000000002 16233.0 16261.0 True False 14022.56053252207 13760.515109068374 13175.117301218457 14871.33116361186 13617.222509612067 12894.429867035733 13448.113419802732 13440.757527839778 13784.280369095382 15208.045609658891 14261.000086971948 0.9832803062200594 0.964905337995139 0.9238564771663179 1.0427972142849558 0.9548574732884267 0.9041743067385128 0.9429993224730555 0.9424835176965255 0.9665717891473775 1.0664080721486084 1.0 13.799787537342686 -10.031155603145656 0.9278085039911796 0.9964755208766877 0.9577374681522627 0.2657369608354063 0.03989205485150403 0.6715743158004958 1.166258335412189 0.013460585073455293 0.0066385694440771964 9.307743290645955e-11 10.031155603145656 -0.03873805272442499 MEIT(ph)IRNSPYRR ddPTM_A549_MK2206_60min_R1 1 MEITIRNSPYRR 12 2 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;Q9UQ88-9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.5)IRNS(0.5)PYRR 54.898 0.009895000000000001 14570000.0 1052.9 1059.1 775.49 636.93 1132.4 799.53 888.11 744.91 1232.6 1220.9 1211.1 True False 1230.6037790664886 1113.0036662181467 885.466142955737 792.9778785928746 965.8254600812098 884.1357339149396 1049.4680911179564 850.5032736911987 953.4180680577335 945.0978420481247 910.3504453404278 1.3517912638646552 1.2226101188998004 0.9726651395492149 0.8710688094367204 1.0609380871121967 0.9712037143940924 1.152817683002841 0.9342591944063376 1.0473088390715297 1.0381692532645526 1.0 9.83027821687505 -5.602847266248 3.7095734485935115 1.012342516865512 1.3299814834185215 0.712644641264278 0.07069765729399492 0.08098213155426823 2.1018893457907257 0.009200745036814796 0.04449704091357912 2.495472186439119e-06 5.602847266248 0.3176389665530095 MEITIRNS(ph)PYR ddPTM_A549_MK2206_60min_R1 6 MEITIRNSPYR 11 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;Q9UQ88-9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.002)IRNS(0.998)PYR;MEIT(0.057)IRNS(0.943)PYR;MEIT(0.001)IRNS(0.997)PY(0.002)R;MEIT(0.002)IRNS(0.998)PYR;MEITIRNS(1)PYR;MEIT(0.003)IRNS(0.995)PY(0.002)R 121.92 2.6225e-06 171293000.0 10730.2 11622.7 10573.72 8738.050000000001 15222.4 13300.300000000001 11472.199999999999 11808.5 17351.0 16449.000000000004 14795.2 True False 12541.195431797176 12214.245785434463 12073.232491836045 10878.872642265971 12983.20512499134 14707.728917975395 13556.550241437912 13482.391037014577 13421.026203853437 12733.159475673363 11121.143513252984 1.1276893798602567 1.0982904564516083 1.085610708777246 0.978215291377339 1.1674343658562945 1.3225014946033475 1.218988876933624 1.2123205694583217 1.2068027166324846 1.1449505584114934 1.0 13.441017517977814 -4.847862472460011 14.438478730849809 1.1239937608392037 1.7088815787847649 0.0 0.09731595575436322 14670502.027850648 8305562.630391686 0.015942991310623305 281776439.82435966 1.4195069641801288e-05 4.847862472460011 0.5848878179455612 MEITIRNS(ph)PYR ddPTM_A549_PD325901_60min_R1 4 MEITIRNSPYR 11 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;Q9UQ88-9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.023)IRNS(0.977)PYR;MEIT(0.008)IRNS(0.992)PYR;MEITIRNS(1)PYR;MEITIRNS(1)PYR 132.06 2.1928e-08 258687000.0 12075.3 12956.3 13751.800000000001 14420.1 14972.5 12346.1 12466.3 13300.5 14885.5 14874.2 15366.0 True False 13301.175566633965 14048.172871138797 14685.07984429121 15310.796826576758 13920.883252320915 12245.557454936414 12940.711868321114 13035.211093459593 14259.91420072064 13935.040473553148 13476.079413099498 0.9870211623793551 1.0424525146002919 1.0897145522915586 1.1361462304603083 1.0330069173374745 0.9086884307785431 0.9602727523067297 0.9672851200912814 1.0581648982313958 1.0340574618466194 1.0 13.718113214794899 -6.9944643515894835 24.989488689143702 1.0084992050838946 1.0667077266747487 0.27952277610283205 0.05175818595182939 203.68996999147006 919503.9344214635 0.008412075135923293 0.015862238449181873 1.012827881858626e-07 6.9944643515894835 0.0582085215908541 MEITIRNS(ph)PYRR ddPTM_A549_MK2206_60min_R1 5 MEITIRNSPYRR 12 2 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;Q9UQ88-9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.054)IRNS(0.946)PYRR;MEIT(0.117)IRNS(0.883)PYRR;MEIT(0.007)IRNS(0.993)PYRR;MEITIRNS(1)PYRR;MEITIRNS(1)PYRR 138.77 2.6374000000000004e-09 98995500.0 3446.22 3409.8900000000003 3358.79 3121.9900000000002 5022.389999999999 3117.3 3724.0899999999997 3095.22 5832.12 4653.1 5320.0 True False 4027.8576840103647 3583.438836182225 3835.116927746715 3886.8776901514575 4283.603084119801 3447.1706169037307 4400.708947598238 3533.976913713699 4511.154131981885 3601.9614782816984 3998.8971754694717 1.0072421238331772 0.8961067711778631 0.9590436461513846 0.9719874054263816 1.071196106365727 0.8620303212720222 1.1004806461625496 0.8837378803816853 1.128099556961545 0.9007387087563278 1.0 11.965386469949298 -8.768971776805131 24.995696455152956 1.0604914510359378 0.9705439852212221 0.0 0.08898311161382758 187.29081435833578 621508.7849644298 0.013140884012694748 0.01412227278263429 1.702269128986044e-09 8.768971776805131 -0.08994746581471569 MEITIRNS(ph)PYRR ddPTM_A549_PD325901_60min_R1 8 MEITIRNSPYRR 12 2 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;Q9UQ88-9 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.001)IRNS(0.999)PYRR;MEIT(0.005)IRNS(0.995)PYRR;MEIT(0.038)IRNS(0.962)PYRR;MEIT(0.033)IRNS(0.967)PYRR;MEITIRNS(1)PYRR;MEITIRNS(1)PYRR;MEIT(0.015)IRNS(0.984)PY(0.001)RR;MEIT(0.004)IRNS(0.996)PYRR 169.09 2.7155999999999997e-16 144010400.0 9632.1 10468.79 10769.66 10608.82 10702.4 10575.12 8611.58 10530.61 11921.220000000001 11744.16 12247.91 True False 10609.94370122275 11351.031673521697 11500.553890826604 11264.10271702166 9950.700345275623 10488.999728889867 8939.298389337386 10320.568722446269 11420.212580559255 11002.631733329123 10741.494715898445 0.9877530066201134 1.0567460091677072 1.0706660660368503 1.0486531916596025 0.9263794852077365 0.9764934961393351 0.832221085218835 0.9608130893711501 1.063186538057524 1.024311050215774 1.0 13.39090714281418 -4.911084946221115 12.655747499228239 1.0092880132205542 0.7006021562797137 0.0 0.0690441059176151 4909206.381891386 16212423.259464089 0.010231254329370611 40128462.21427535 1.2271991725522982e-05 4.911084946221115 -0.3086858569408405 MENGVLGNALEGVHVEEEEGEKT(ph)EDESLVENNDNIDEEAREELR ddPTM_A549_PD325901_60min_R1 1 MENGVLGNALEGVHVEEEEGEKTEDESLVENNDNIDEEAREELR 44 2 P49321-4;P49321;P49321-3;E9PPR5;E9PNB5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 MENGVLGNALEGVHVEEEEGEKT(0.912)EDES(0.088)LVENNDNIDEEAREELR 53.386 0.00086921 11854000.0 979.41 782.76 992.96 919.7 1168.2 1258.7 890.98 1050.6 1192.5 927.43 879.43 True False 1078.8389821964654 848.7259322964591 1060.3482367535446 976.5077802097528 1086.1496620712167 1248.4495645206548 924.886731462964 1029.6449588202443 1142.383372030457 868.8719115238059 771.2656851660875 1.3987903299031694 1.1004326377021312 1.3748157828715082 1.2661107566317664 1.4082691385878536 1.6187023337513178 1.199180450072526 1.3350068317878248 1.481180083597848 1.1265533113102257 1.0 9.591084114304174 -10.905388492906743 1.1131035423187368 0.9965077259230574 1.3590213421122495 0.39776528057325866 0.13520937748344528 0.3430880045109492 0.7429425492244207 0.09769714027731059 0.022344772034464222 1.2434018439704473e-11 10.905388492906743 0.3625136161891921 MENKSLESSQT(ph)DLK ddPTM_A549_PD325901_60min_R1 1 MENKSLESSQTDLK 14 1 C9JXP4;O96006 C9JXP4 ZBED1 Zinc finger BED domain-containing protein 1 1 MENKS(0.071)LES(0.071)S(0.071)QT(0.788)DLK 52.026 0.021203 23820000.0 3660.7 3635.9 4202.9 3464.6 3682.6 3252.4 3180.2 3673.6 3449.5 3544.9 5618.5 True False 4032.331569135095 3942.310053192158 4488.134068090831 3678.600473322506 3423.946880280314 3225.913532729783 3301.2242512722146 3600.327166116552 3304.529510959381 3321.074409023583 4927.460118605986 0.8183387530442094 0.8000693984931665 0.910841277262444 0.7465510394355477 0.6948705413873493 0.654680800063465 0.6699646819680714 0.730665917015095 0.6706354656187975 0.6739931585611978 1.0 12.266628479234306 -10.835989829705914 1.0540458823614962 1.001691426368607 0.7396650227846007 0.0 0.1193813281693564 0.30156588011703894 0.5884684795898811 0.05892943189361722 0.014107094356788513 1.4588484231403723e-11 10.835989829705914 -0.2620264035840063 MEPDTEKMDRT(ph)PEKDK ddPTM_A549_PD325901_60min_R1 1 MEPDTEKMDRTPEKDK 16 3 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 MEPDT(0.008)EKMDRT(0.992)PEKDK 51.348 0.004388 7147700.0 2113.8 2108.2 1830.6 2323.1 2374.9 2059.7 2371.0 2240.5 2131.1 1639.9 2517.1 True False 2328.391419902686 2285.865412728542 1954.8355242920557 2466.5926108570998 2208.0952169602233 2042.9264860913588 2461.2297024609848 2195.811469861751 2041.5372780998791 1536.3564341329159 2207.512657211554 1.0547579024275318 1.0354936834726738 0.8855376289263633 1.1173628394832424 1.0002638987127734 0.9254427055797296 1.1149334498357606 0.9946993792712456 0.924813396394597 0.6959672141013147 1.0 11.108205994537636 -8.528327964738093 24.946886825225743 0.9642457994440059 1.016968210573523 0.14138978628755428 0.10539283660603892 238.32825241195465 1091076.5564446494 0.011221653373796919 0.012743966928294485 2.962593292712046e-09 8.528327964738093 0.05272241112951703 MEREDS(ph)S(ph)EEEEEEIDDEEIER ddPTM_A549_PD325901_60min_R1 2 MEREDSSEEEEEEIDDEEIER 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 2 MEREDS(1)S(1)EEEEEEIDDEEIER;MEREDS(1)S(1)EEEEEEIDDEEIER 53.201 0.0051361 6179000.0 406.65 546.86 561.9 564.1700000000001 590.98 300.66 581.3299999999999 378.81 813.0799999999999 577.03 321.69000000000005 True False 447.93280864009245 592.9458114053372 600.0339129791902 599.0174995769667 549.4716035703198 298.21152464350536 603.4528312659817 371.25433737930405 778.9090751618648 540.5962273234443 282.12416936092535 1.5877151172647168 2.101719298805532 2.1268433482264277 2.1232406317185655 1.947623292307768 1.0570222512981482 2.1389618359637104 1.3159253183457431 2.760873259906335 1.916164178872077 1.0 8.14018645556884 -11.145380728285858 1.5316967570618107 1.001686792658831 2.014475764441122 0.0 0.5179374069027612 0.34948228810115683 1.4735362787307125 0.3542041902370463 0.07626990725567485 7.15515871558734e-12 11.145380728285858 1.0127889717822909 MEREDS(ph)SEEEEEEIDDEEIER ddPTM_A549_MK2206_60min_R1 4 MEREDSSEEEEEEIDDEEIER 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 MEREDS(0.5)S(0.5)EEEEEEIDDEEIER;MEREDS(0.956)S(0.044)EEEEEEIDDEEIER;MEREDS(0.5)S(0.5)EEEEEEIDDEEIER;MEREDS(0.947)S(0.053)EEEEEEIDDEEIER 150.94 9.414e-23 40372400.0 936.95 790.6700000000001 868.7900000000001 604.58 1452.2600000000002 1024.52 766.64 656.12 1343.65 1580.0700000000002 1946.35 True False 1095.084253771817 830.9117257753769 991.9974858973225 752.7021271406277 1238.6344777971894 1132.934026378664 905.9285644511041 749.1270192832283 1039.315420368144 1223.131089593726 1463.0175784727455 0.7485106603537759 0.5679437745667907 0.6780489178625425 0.514486044608144 0.8466299352945634 0.7743816909987793 0.6192191931123681 0.5120423912235199 0.7103916150160634 0.8360330782016723 1.0 10.514731388535685 -10.27363362943155 0.728033521916169 0.9989202505799277 0.6586846682202605 0.4126998053816515 0.11108779294756464 0.35879675604146116 0.3555893526490464 0.06527096500279739 0.021367050089333182 5.325573348733867e-11 10.27363362943155 -0.3402355823596672 MEREDS(ph)SEEEEEEIDDEEIER ddPTM_A549_PD325901_60min_R1 2 MEREDSSEEEEEEIDDEEIER 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 MEREDS(0.937)S(0.063)EEEEEEIDDEEIER;MEREDS(0.917)S(0.083)EEEEEEIDDEEIER 133.29 2.9833999999999995e-18 17702500.0 1208.53 862.17 718.12 898.19 1232.69 988.71 1035.6399999999999 945.9200000000001 1107.9299999999998 1106.9299999999998 1034.06 True False 1331.2190759272357 934.8280916858779 766.8559416063648 953.669156362507 1146.1101069496387 980.6582735657556 1075.0518469239526 927.052883540115 1061.3675550303594 1037.0382508901437 906.8771754464185 1.467915514878772 1.0308210604437147 0.845600663870356 1.0515968227925185 1.2637986024793884 1.0813573217156092 1.1854437139128002 1.022247453833828 1.170354248366535 1.1435266858267241 1.0 9.824763359741972 -10.978991470511554 1.2014525621269412 0.9988606427820427 1.1185752763514003 0.0 0.15572164168415828 1.0872238664186964 2.74687492679752 0.10900130226703147 0.024085357566807387 1.0495630417346918e-11 10.978991470511554 0.11971463356935763 MES(ph)EGGADDS(ph)AEEGDLLDDDDNEDRGDDQLELIKDDEK ddPTM_A549_PD325901_60min_R1 2 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEK 38 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;P07910-4;P07910-3;G3V5V7 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK 170.46 2.4644999999999996e-65 87257000.0 3498.2 3537.5 3194.8 4010.5 4920.8 3858.6 4319.8 3368.9 3662.5 4183.2 4312.3 True False 3853.33468876127 3835.6175398573314 3411.6183398930707 4258.219476493652 4575.1799838384195 3827.176840914754 4484.192352885263 3301.7046466490788 3508.57786168683 3919.0720380906237 3781.9144379219692 1.0188846818222952 1.0141999780314623 0.9020876584843196 1.1259428383137604 1.2097523777804773 1.0119681192517023 1.1856937607898848 0.8730246812414009 0.9277253410351272 1.036266711587483 1.0 11.884901008768903 -8.273903243772619 24.990563104515275 0.957953257529343 1.0642130506970893 0.2479335402535665 0.090124913120316 834.5053679747381 1673214.5683359394 0.01477141539940302 0.017919185086448824 5.3222682057814e-09 8.273903243772619 0.10625979316774625 MES(ph)EGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEK ddPTM_A549_MK2206_60min_R1 1 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEK 38 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;P07910-4;P07910-3;G3V5V7 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 MES(0.534)EGGADDS(0.466)AEEGDLLDDDDNEDRGDDQLELIKDDEK 69.783 8.564799999999999e-05 27645000.0 953.64 1195.6 1101.8 732.28 1517.8 1449.5 1263.9 1251.3 1608.2 1675.4 1478.8 True False 1114.5911177404946 1256.450933179507 1258.0518076424346 911.6886328732983 1294.533630617502 1602.8851278997722 1493.534269813407 1428.675606945533 1243.9452677676838 1296.925976384165 1111.5731471962877 1.0027150444861133 1.1303358095224263 1.1317759976620603 0.8201787126405882 1.1645959907206234 1.4419969859318003 1.3436221211177481 1.2852735877518007 1.119085388942039 1.1667482069492157 1.0 10.118387172860626 -5.255580562314454 22.20706746907027 1.1138174707390796 1.0027147954004336 0.003140886456959313 0.16378770872991572 473.3088813806613 1793731.5321928246 0.024555883509676052 0.28706484639217145 5.5516162420634146e-06 5.255580562314454 -0.11110267533864593 MES(ph)HS(ph)EDEDLAGAVGGLGWNSR ddPTM_A549_PD325901_60min_R1 2 MESHSEDEDLAGAVGGLGWNSR 22 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 2 MES(1)HS(1)EDEDLAGAVGGLGWNSR;MES(1)HS(1)EDEDLAGAVGGLGWNSR 102.53 1.8565000000000003e-10 5646700.0 1786.88 2023.2 2509.3 2070.8599999999997 2251.99 2453.6800000000003 2180.6 2097.73 2544.3999999999996 2387.8999999999996 2104.21 True False 1968.2827421684694 2193.702164421019 2679.5961876467013 2198.772318935704 2093.8179913437402 2433.69804359501 2263.5839262701047 2055.889129512651 2437.467716389344 2237.127586478437 1845.4055096861973 1.0665854912848758 1.1887371923984598 1.4520365164089892 1.1914846397687384 1.1346113254532249 1.3187876761074855 1.2266051631410901 1.114058194105124 1.3208304102244846 1.2122688345386214 1.0 10.849722153810447 -10.937261159470415 1.122601736587172 0.9963083170264391 1.2338714907231938 0.02028142316660797 0.1203746653476681 0.4138504236485631 0.9025621359447756 0.0786565592752319 0.017288585915249552 1.1554172324459375e-11 10.937261159470415 0.23756317369675473 MES(ph)HSEDEDLAGAVGGLGWNSR ddPTM_A549_MK2206_60min_R1 1 MESHSEDEDLAGAVGGLGWNSR 22 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 1 MES(0.549)HS(0.451)EDEDLAGAVGGLGWNSR 61.801 0.00033442 1195900.0 593.74 1061.9 744.95 511.04 1206.7 819.79 891.99 623.99 1147.3 1100.0 1296.5 True False 693.9487964506949 1115.9461742583792 850.5951117291984 636.2448229414572 1029.1960285058242 906.5396336674397 1054.0530368944226 712.4424933892301 887.4383818616243 851.5092360168209 974.5432684203317 0.7120759220629974 1.1450965908032507 0.8728141061483654 0.6528646223915401 1.0560803833513528 0.930219994374266 1.081586699175472 0.7310527058937576 0.9106197853073281 0.8737521089207864 1.0 9.928582430414039 -10.40612743166403 0.9367031424993116 0.996112052869344 0.9058923079279166 0.0 0.15349524975396062 1.3512188915077614 2.2636712547706943 0.07304899651183781 0.026130654114190868 3.9252974154026204e-11 10.40612743166403 -0.09021974494142737 MES(ph)SFGSPSKQESSESLPK ddPTM_A549_MK2206_60min_R1 2 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.416)S(0.318)FGS(0.226)PS(0.039)KQESSESLPK;MES(0.305)S(0.305)FGS(0.272)PS(0.117)KQES(0.001)S(0.001)ESLPK 69.152 0.0002969 58064000.0 6000.5 5959.4 5607.4 6403.200000000001 7830.0 6463.200000000001 6913.0 6488.599999999999 8887.7 9455.9 8979.4 True False 7013.23770186007 6262.708005344555 6402.613637841883 7971.984287450573 6678.217372338278 7147.131534075061 8169.002616678601 7408.378920504101 6874.65014074049 7319.805622592238 6749.567161167395 1.0390648073271518 0.9278680922498393 0.9485961817934554 1.1811104470989144 0.9894289830554444 1.0589022026767867 1.2103002194981793 1.0976080011659235 1.018532000139615 1.084485189614176 1.0 12.720579272090815 -4.863283125571839 19.247870610018275 1.0307257294041012 4.610010369992757 0.0 0.08693933472855683 9383.714600437053 1381356.7157575965 0.011644682720458828 67734.90903324922 1.3699883511847381e-05 4.863283125571839 3.5792846405886563 MES(ph)STGPR ddPTM_A549_MK2206_60min_R1 1 MESSTGPR 8 0 E9PNY9;Q9NQ32-2;Q9NQ32 E9PNY9 C11orf16 Uncharacterized protein C11orf16 1 MES(0.471)S(0.058)T(0.471)GPR 47.198 0.038056 17020000.0 1479.1 2017.4 1498.6 1587.7 2555.9 1894.3 1769.6 1969.4 2785.8 2537.1 2288.3 True False 1728.7359194769153 2120.077042987902 1711.1240142793165 1976.6865712745612 2179.930495780256 2094.753568665428 2091.1134139265805 2248.568481034551 2154.820748008466 1963.967347907524 1720.0519561328542 1.0050486633924622 1.2325656997910768 0.9948094929215916 1.1492016646512768 1.2673631677274064 1.217843194327109 1.2157268892202382 1.3072677677074047 1.2527649181325258 1.1418069907161748 1.0 10.748236428498252 -5.239154522332434 22.858226793617227 1.1540049078740775 1.0050481533302595 0.16392426150835715 0.09971888966029327 3160.635160684182 3241791.9070476447 0.016873847906729775 0.9956635479574256 5.7656128591541164e-06 5.239154522332434 -0.14895675454381796 MES(ph)STGPR ddPTM_A549_PD325901_60min_R1 1 MESSTGPR 8 0 E9PNY9;Q9NQ32-2;Q9NQ32 E9PNY9 C11orf16 Uncharacterized protein C11orf16 1 MES(0.821)S(0.034)T(0.145)GPR 54.711999999999996 0.02238 10168000.0 3491.8 3670.3 3374.9 3365.7 4147.7 3941.3 3318.0 3282.3 4695.5 4141.2 4062.7 True False 3846.2849654727015 3979.609061918969 3603.9410089223506 3573.5916449407005 3856.3798607882045 3909.2033595338485 3444.2683056792685 3216.831951585461 4498.164464041097 3879.7239252583877 3563.0136555772056 1.0795032905507083 1.116922203115799 1.01148672368434 1.0029688321140553 1.0823365368672644 1.0971620480361477 0.9666727772114866 0.9028401972443006 1.262460629922115 1.088888312057248 1.0 11.798882297405195 -8.759038375734 24.999999670995805 1.1239397342378168 1.035240914962764 0.17192842690698018 0.08218507637256284 101.66525072474806 1058566.5001805066 0.018621553621764764 0.02063346827663028 1.7416529682261476e-09 8.759038375734 -0.08869881927505285 MESAECLEMTYVPNIDRIS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 MESAECLEMTYVPNIDRISPEK 22 1 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 MES(0.001)AECLEMT(0.011)Y(0.01)VPNIDRIS(0.978)PEK;MESAECLEMTYVPNIDRIS(1)PEK 74.525 4.6106e-05 10559100.0 3313.68 4569.0 3964.1800000000003 3704.2799999999997 6011.900000000001 4502.8 4305.27 4552.82 5926.4 5499.9 7441.4 True False 3872.948172302254 4801.542584223123 4526.360332927919 4611.828766291449 5127.557473915774 4979.2833072832655 5087.481830682467 5198.196177426487 4584.079862516108 4257.468770153556 5593.495007807994 0.6924021862710135 0.8584154589430438 0.8092186238853428 0.8244985934292904 0.9167001073136178 0.8901917853386216 0.9095354199084509 0.9293288311101188 0.8195376694029695 0.7611464324560099 1.0 12.449534294890638 -14.99999996843415 0.020645295461590937 2.076886285250631 9.993967821622467e-07 0.028262093715461845 0.08091163036248465 1470.846101604643 2.3580633892202676 160.1320733677397 87.39514260635421 1.0000000726830592e-15 14.99999996843415 -2.076885285853849 MESAECLEMTYVPNIDRIS(ph)PEK ddPTM_A549_PD325901_60min_R1 6 MESAECLEMTYVPNIDRISPEK 22 1 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 MES(0.001)AECLEMT(0.01)Y(0.01)VPNIDRIS(0.979)PEK;MESAECLEMT(0.002)Y(0.002)VPNIDRIS(0.996)PEK;MESAECLEMTY(0.001)VPNIDRIS(0.999)PEK;MESAECLEMT(0.002)YVPNIDRIS(0.998)PEK;MESAECLEMTYVPNIDRIS(1)PEK;MESAECLEMTYVPNIDRIS(1)PEK 164.96 8.934199999999998e-34 61013700.0 13826.7 15762.0 16160.900000000001 14397.499999999998 15737.400000000001 14976.800000000001 15838.7 16968.8 12932.5 15495.4 16490.600000000002 True False 15230.376405321438 17090.319056743814 17257.67585738636 15286.80087590508 14632.059315082653 14854.833906342225 16441.450395769203 16630.34397223392 12388.991998980197 14517.017799538487 14462.360742526267 1.0531044465331885 1.1817101897126718 1.1932820764621455 1.0570059168109784 1.0117338085792171 1.027137558715563 1.1368441631678752 1.1499052103805394 0.8566369086998796 1.0037792624582722 1.0 13.820015447298186 -8.755823067396337 24.999998297117145 0.9323007606322264 1.1013294673339982 0.47240677761311134 0.06860739219871102 83.09626605907171 369887.370421911 0.013386611491002714 0.01497381240038368 1.7545951824962474e-09 8.755823067396337 0.16902870670177172 MESAECLEMTYVPNIDRIS(ph)PEKK ddPTM_A549_MK2206_60min_R1 5 MESAECLEMTYVPNIDRISPEKK 23 2 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 MESAECLEMTY(0.001)VPNIDRIS(0.999)PEKK;MESAECLEMT(0.001)Y(0.003)VPNIDRIS(0.996)PEKK;MESAECLEMTY(0.002)VPNIDRIS(0.998)PEKK;MESAECLEMTYVPNIDRIS(1)PEKK;MESAECLEMT(0.015)Y(0.011)VPNIDRIS(0.974)PEKK 133.15 8.390299999999999e-23 22838900.0 4876.18 5597.860000000001 5032.29 4874.98 6867.02 6095.66 5573.72 4940.18 8191.68 7158.320000000001 7149.5599999999995 True False 5699.159972844935 5882.7671636067535 5745.944391977622 6069.350318846165 5856.8904546863905 6740.698695228368 6586.3927765997205 5640.465643666737 6336.277559424936 5541.250540330847 5374.12693418224 1.0604810870013723 1.0946461138067465 1.0691865790200135 1.1293648983692481 1.0898310602664638 1.254287213119962 1.2255744714005246 1.0495594377926662 1.179033848107107 1.0310978151791714 1.0 12.391814682148732 -4.323219318037139 12.877939217554458 1.1037331120850065 1.1137452421935539 0.0 0.07754782488154568 0.0 0.0 0.011522112216647878 0.0 4.750952429944372e-05 4.323219318037139 0.010012130108547401 MESAECLEMTYVPNIDRIS(ph)PEKK ddPTM_A549_PD325901_60min_R1 7 MESAECLEMTYVPNIDRISPEKK 23 2 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 MESAECLEMTY(0.001)VPNIDRIS(0.999)PEKK;MESAECLEMT(0.001)Y(0.002)VPNIDRIS(0.997)PEKK;MESAECLEMT(0.001)Y(0.003)VPNIDRIS(0.997)PEKK;MESAECLEMT(0.038)YVPNIDRIS(0.962)PEKK;MESAECLEMT(0.012)Y(0.011)VPNIDRIS(0.977)PEKK;MESAECLEMT(0.174)Y(0.011)VPNIDRIS(0.815)PEKK;MESAECLEMT(0.178)Y(0.012)VPNIDRIS(0.809)PEKK 105.46 1.2173999999999998e-10 31831700.0 10887.340000000002 10578.599999999999 11985.100000000002 11718.600000000002 13476.6 11628.2 11665.6 13626.600000000002 11207.7 12618.1 12524.6 True False 11992.614741963907 11470.095747599922 12798.48095826107 12442.431307128409 12530.050107746058 11533.503794517428 12109.540791661262 13354.806773139095 10736.679344826622 11821.391012581576 10984.153599980871 1.0918105462386098 1.044240290632853 1.1651768014499868 1.132761955108683 1.1407387919054481 1.050012974557959 1.1024555220788566 1.215824838170722 0.977469883964962 1.0762222965092334 1.0 13.423136084617356 -8.79166279478527 24.999905987349756 0.9893607439040406 1.1154817362947844 0.3811786457681823 0.053398937072575654 95.10086613936738 78664.17333840785 0.007956522747922653 0.008470869280058217 1.6156125021045954e-09 8.79166279478527 0.1261209923907438 MESEGGADDS(ph)AEEGDLLDDDDNEDR ddPTM_A549_MK2206_60min_R1 2 MESEGGADDSAEEGDLLDDDDNEDR 25 0 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 MES(0.001)EGGADDS(0.999)AEEGDLLDDDDNEDR;MES(0.118)EGGADDS(0.882)AEEGDLLDDDDNEDR 71.656 1.4079e-05 2591100.0 0.0 0.0 288.6 0.0 0.0 0.0 152.17 137.78 0.0 309.3 0.0 True False 0.0 0.0 329.52781964567663 0.0 0.0 0.0 179.81731927961567 157.31073693355356 0.0 239.42891518182063 0.0 0.0 MESEGGADDS(ph)AEEGDLLDDDDNEDR ddPTM_A549_PD325901_60min_R1 1 MESEGGADDSAEEGDLLDDDDNEDR 25 0 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 MES(0.008)EGGADDS(0.992)AEEGDLLDDDDNEDR 88.79 6.9047e-09 5388000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 114.25 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 111.97119412260885 0.0 0.0 0.0 0.0 MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQLELIKDDEK ddPTM_A549_MK2206_60min_R1 1 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEK 38 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;P07910-4;P07910-3;G3V5V7 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK 282.13 2.084999999999999e-201 92275000.0 8664.5 9168.1 9363.3 6827.2 14338.0 11142.0 10196.0 11524.0 14107.0 10455.0 11145.0 True False 10126.855773313318 9634.717129878756 10691.156734886916 8499.864306484656 12228.899193433743 12321.03904453899 12048.481220838275 13157.562290769856 10911.78702424992 8093.208238687154 8377.38891364798 1.2088319973799002 1.1500859312120997 1.2761920026739446 1.0146197573133016 1.459750683594395 1.4707493195721442 1.4382143821936637 1.5706042093061099 1.3025284055361257 0.9660776552348127 1.0 13.03228493570786 -10.361691657673303 0.9701128899407698 1.0183201505076536 1.3201875400380347 0.4077085505386172 0.15453581797283847 0.44564425370747396 0.8120941216500067 0.07980702616586269 0.030700734128395822 4.348188292113488e-11 10.361691657673303 0.30186738953038117 MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQLELIKDDEK ddPTM_A549_PD325901_60min_R1 5 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEK 38 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;P07910-4;P07910-3;G3V5V7 G3V4C1;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(0.01)EGGADDS(0.99)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(0.012)EGGADDS(0.988)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK 405.96 0.0 3169273000.0 45535.100000000006 49764.600000000006 49865.7 47500.7 58566.7 43177.2 42996.3 47801.700000000004 50581.200000000004 52709.5 53744.0 True False 50157.78983083109 53958.43749087892 53249.88626881368 50434.710357083146 54453.177036146444 42825.579198555024 44632.547724978125 46848.25759379178 48455.44806486113 49381.41317454045 47133.8287112859 1.0641569166398128 1.1447921581205835 1.1297594047576984 1.0700321135805984 1.1552886435280818 0.9085953840261805 0.9469323614334589 0.9939412705205137 1.028039719872338 1.04768516635943 1.0 15.524475256710772 -7.245284393992373 24.978570041035688 0.9998749072231987 1.1131484117518962 0.6601672311437908 0.044273332787714705 422.16856690892996 652750.0345004902 0.006475707024977461 0.011194496370714771 5.6848054435311915e-08 7.245284393992373 0.11327350452869744 MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQVK ddPTM_A549_MK2206_60min_R1 3 MESEGGADDSAEEGDLLDDDDNEDRGDDQVK 31 1 B4DY08 B4DY08 HNRNPC 1 MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MES(0.205)EGGADDS(0.795)AEEGDLLDDDDNEDRGDDQVK 177.03 1.4925e-58 150198600.0 1983.23 2558.75 2547.29 2009.37 3020.83 3000.4700000000003 2065.65 2749.35 3704.1900000000005 3193.38 3163.3900000000003 True False 2317.9507386817677 2688.9794456951004 2908.534025312664 2501.6657402040482 2576.4699086693017 3317.977743849208 2440.95186679331 3139.0787820312507 2865.1968793759356 2471.9932401012697 2377.8329578775138 0.9748164735469065 1.130852962899177 1.2231868583017966 1.0520779989680475 1.0835369659309853 1.3953788187084766 1.0265447195130717 1.320142683543774 1.2049613787561635 1.0395991997300789 1.0 11.215431654368741 -4.383717787781874 16.320316973369454 1.1255976207920064 1.131380740572538 0.0 0.13120792521713642 0.0 0.0 0.017275841413068045 0.0 4.133159947720303e-05 4.383717787781874 0.005783119780531587 MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQVK ddPTM_A549_PD325901_60min_R1 6 MESEGGADDSAEEGDLLDDDDNEDRGDDQVK 31 1 B4DY08 B4DY08 HNRNPC 1 MES(0.001)EGGADDS(0.999)AEEGDLLDDDDNEDRGDDQVK;MES(0.001)EGGADDS(0.999)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK 372.14 0.0 491151000.0 24329.32 26014.7 26224.460000000003 26334.07 31667.449999999997 28390.93 29441.29 29666.75 29110.12 29418.51 31958.39 True False 26799.21465610125 28207.050067597593 28004.209556088717 27960.66569488771 29443.237558771718 28159.723679062856 30561.694401842065 29075.023398134854 27886.722889569162 27561.020258005687 28027.71063092575 0.9561685222527958 1.0063986473612996 0.9991615057274388 0.9976079053719049 1.0505045505316468 1.004710090305822 1.090409944796573 1.0373670465276426 0.9949697018349754 0.9833489656338495 1.0 14.774566286021203 -3.9971282377497577 1.236933176108975 1.0108538140946703 0.0008025680630171026 0.22978948782955677 0.030275780082011754 37.50893399584088 3.677678540536274 0.004614022590268229 94.3572135358002 0.00010066343876417535 3.9971282377497577 -1.0100512460316533 MESHS(ph)EDEDLAGAVGGLGWNSR ddPTM_A549_MK2206_60min_R1 1 MESHSEDEDLAGAVGGLGWNSR 22 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 1 MES(0.18)HS(0.82)EDEDLAGAVGGLGWNSR 86.73200000000001 1.0258e-06 2526500.0 639.7 1031.0 710.29 453.89 1194.3 738.89 488.26 823.45 961.29 995.42 1273.9 True False 747.6657208365784 1083.4734962429511 811.019802550685 565.0930703758962 1018.6200520796433 817.0788493645134 576.97052186019 940.1765592098616 743.5593498646915 770.5539306507859 957.5554721486011 0.7808066922315595 1.131499456435469 0.8469690019429229 0.5901413409584699 1.0637713236539947 0.8532966215848773 0.6025452714144702 0.981850750745809 0.7765183025859206 0.8047094430172137 1.0 9.903212256003503 -10.97392032744477 1.210634176972545 1.0009920312676088 0.8441985327023823 0.0 0.1696824099412147 0.8548139177642062 2.2046410635601963 0.11225495910611788 0.02520291974050755 1.0618903461285233e-11 10.97392032744477 -0.1567934985652265 MESHS(ph)EDEDLAGAVGGLGWNSR ddPTM_A549_PD325901_60min_R1 2 MESHSEDEDLAGAVGGLGWNSR 22 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 1 MES(0.035)HS(0.965)EDEDLAGAVGGLGWNSR;MES(0.186)HS(0.814)EDEDLAGAVGGLGWNSR 130.57 2.3638e-22 10119800.0 2485.1000000000004 2873.0 2331.8 2709.5 3265.7 3214.5 3066.4 2929.2 2937.6 3373.3 3346.3 True False 2737.385522566074 3115.117792794378 2490.0499702524926 2876.8596612790307 3036.3284980533904 3188.3221777640792 3183.0935299984653 2870.7748080870538 2814.1428877791773 3160.30926230902 2934.7263139434385 0.9327566627116944 1.0614679051991547 0.8484777467737946 0.9802820956797667 1.0346206675652243 1.0864121000366402 1.0846304525485009 0.9782086985241046 0.958911525892092 1.076866775376564 1.0 11.519010251736018 -6.515827838843286 24.626047468727776 0.9995588395348751 0.9515278967127923 0.1485832237952256 0.06547257737865161 494.6875478302782 1727744.143119885 0.009130848620426558 0.019622639059877826 3.0491034626065865e-07 6.515827838843286 -0.04803094282208287 MESMNRPYTSLVPPLS(ph)PQPK ddPTM_A549_MK2206_60min_R1 4 MESMNRPYTSLVPPLSPQPK 20 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 MES(0.006)MNRPY(0.006)T(0.006)S(0.006)LVPPLS(0.975)PQPK;MESMNRPYTSLVPPLS(0.999)PQPK;MESMNRPYTSLVPPLS(1)PQPK;MES(0.005)MNRPY(0.038)T(0.041)S(0.041)LVPPLS(0.875)PQPK 72.033 0.00017616 25593000.0 7323.099999999999 8270.9 8457.6 7045.799999999999 11286.3 8039.9 7851.8 7587.5 11495.8 11549.9 10759.300000000001 True False 8559.060247394624 8691.853482129796 9657.014855978077 8772.021316297976 9626.1002208712 8890.676881546311 9278.370424654573 8663.051360744214 8892.019655020364 8940.769568246076 8087.468868426443 1.0583113686915417 1.074730997242274 1.1940713482903356 1.0846435960383147 1.190248813006451 1.0993151288972005 1.1472526912440333 1.0711696702246176 1.0994811602595338 1.1055089934442812 1.0 12.981472538326338 -10.33503985462074 0.5076571137508815 0.9874466531165846 1.121249321839895 0.05451556016477832 0.052971957808184506 0.7343951975083726 0.31166791852217723 0.04604308432815104 0.01058194850170266 4.623385912614578e-11 10.33503985462074 0.13380266872331026 MESMNRPYTSLVPPLS(ph)PQPK ddPTM_A549_PD325901_60min_R1 2 MESMNRPYTSLVPPLSPQPK 20 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 MES(0.007)MNRPY(0.007)T(0.007)S(0.007)LVPPLS(0.971)PQPK;MES(0.012)MNRPY(0.011)T(0.012)S(0.012)LVPPLS(0.952)PQPK 52.321000000000005 0.0024916 22080000.0 4117.4 4797.6 5188.0 5201.3 5755.3 5607.8 5748.200000000001 5909.7 5593.9 7027.0 6556.0 True False 4535.39541693032 5201.910589178666 5540.088877978358 5522.572487990636 5351.067582707129 5562.131936060168 5966.950896535737 5791.826397430035 5358.807836311252 6583.314020764676 5749.65356190813 0.7888119463366701 0.9047346128194053 0.963551772002725 0.9605052597565317 0.9306765225227375 0.9673855783085253 1.0377931178440416 1.007334848103076 0.9320227346937459 1.1449931634802497 1.0 12.489259315575733 -4.398641093894403 0.938514330624852 0.9734802442502667 0.09850131201507147 0.4966192291189775 0.05960437125784802 3.5068152352726596 0.7113757781302508 0.005344124883303921 4.6124279853480745 3.9935479756519054e-05 4.398641093894403 -0.8749789322351952 MESSFGS(ph)PSKQESSESLPK ddPTM_A549_MK2206_60min_R1 2 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.046)S(0.042)FGS(0.874)PS(0.036)KQES(0.001)S(0.001)ESLPK;MESS(0.018)FGS(0.783)PS(0.199)KQESSESLPK 191.41 1.67e-44 79916000.0 11485.8 12357.400000000001 11073.4 11384.8 17307.0 12968.5 12353.400000000001 13033.3 18653.9 18302.9 18103.4 True False 13424.322239150802 12986.33887727705 12643.774629467902 14174.076511083089 14761.163226444269 14340.818062206405 14597.852875000348 14880.810187807254 14428.821434157198 14168.262178083884 13607.82615157783 0.9865148253377891 0.9543286879639685 0.9291546268028897 1.0416121100606215 1.0847554239758352 1.0538654670087466 1.0727542160220591 1.0935479349934096 1.0603325816654539 1.041184831453852 1.0 13.732148994456841 -6.274101622364565 23.840479108163773 1.043402056984436 0.9564323141903316 0.6917601351578925 0.0286478611250274 234.03232221755954 440636.6216268733 0.00521757897690103 0.012212302184229655 5.319837636175367e-07 6.274101622364565 -0.08696974279410441 MESSFGS(ph)PSKQESSESLPK ddPTM_A549_PD325901_60min_R1 4 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.002)S(0.01)FGS(0.59)PS(0.397)KQESSESLPK;MES(0.008)S(0.024)FGS(0.953)PS(0.014)KQESSESLPK;MESS(0.001)FGS(0.911)PS(0.088)KQESSESLPK;MESSFGS(0.864)PS(0.135)KQESSESLPK 133.58 3.2455e-17 154000000.0 15591.4 15960.1 16360.6 16948.0 19307.199999999997 17179.6 18281.8 18431.2 18429.9 19082.0 20434.0 True False 17174.227450217968 17305.11363897582 17470.92870028001 17994.839468299313 17951.128878224095 17039.695033478234 18977.523903184818 18063.575257003322 17655.355394703663 17877.159263445512 17920.74754179847 0.9583432504788477 0.9656468625883635 0.9748995492253154 1.0041344216432952 1.0016953163563496 0.9508361743133056 1.058969435227047 1.0079699641363575 0.9851907881367222 0.9975677198592696 1.0 14.1293431984378 -6.037111377757618 3.0142803602528527 0.9968347248689766 0.962221167396033 0.2869640881223312 0.02406287286270982 0.2681479895085258 4.850953528810939 0.0032775015303490172 0.010853206593340266 9.180971140740781e-07 6.037111377757618 -0.03461355747294359 MESSFGSPS(ph)KQESSESLPK ddPTM_A549_MK2206_60min_R1 2 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.005)S(0.004)FGS(0.418)PS(0.57)KQES(0.001)S(0.001)ESLPK;MESSFGS(0.424)PS(0.576)KQESSESLPK 211.64 1.0060999999999998e-66 78128000.0 12967.0 14456.3 12460.3 11036.8 17924.1 13993.8 14144.3 12684.8 19853.7 19141.6 16797.6 True False 15155.512587287642 15192.063922150299 14227.357904126893 13740.816495460771 15287.488633911698 15474.614627667348 16714.136223215264 14482.909245570769 15356.868649844104 14817.49926558144 12626.292329824428 1.2003137731485094 1.2032086320594122 1.1268040951753198 1.0882701062610232 1.2107662514514486 1.2255865952917095 1.3237564747122943 1.1470437138035245 1.2162611357864581 1.1735431810477877 1.0 13.624143438099894 -10.709006103831458 0.855473366186689 0.9938924447619218 1.1938021979178681 0.08568328797106972 0.07646940861170351 0.3740948281724038 0.4626940724706959 0.04883408191007229 0.011275570140591279 1.9543119885260552e-11 10.709006103831458 0.19990975315594628 MESSFGSPS(ph)KQESSESLPK ddPTM_A549_PD325901_60min_R1 2 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.033)S(0.075)FGS(0.264)PS(0.623)KQES(0.002)S(0.002)ES(0.001)LPK;MESSFGS(0.173)PS(0.826)KQESSESLPK 136.64 1.4891e-17 112776000.0 12249.7 12700.4 12223.7 11349.8 15831.0 11786.900000000001 12446.1 13827.900000000001 14091.2 12481.0 15499.599999999999 True False 13493.280526247485 13770.70728005767 13053.273789079425 12050.851368733984 14719.085173985119 11690.911394334242 12919.74314626725 13552.0916867223 13498.99586746798 11692.94752997922 13593.247460059678 0.9926458387441323 1.0130549981172206 0.9602763303936879 0.8865321847588198 1.082823307471848 0.8600528629148428 0.9504530234021451 0.9969723369299129 0.9930662931820646 0.860202653143481 1.0 13.730602540205066 -8.276491593873285 22.203621396645527 0.9966527629365589 0.9630867443430892 0.0 0.06940939396942031 372.6802770993453 549741.5751251933 0.008578403654741452 0.010400114503308334 5.290642375837193e-09 8.276491593873285 -0.03356601859346975 MESST(ph)GPR ddPTM_A549_MK2206_60min_R1 1 MESSTGPR 8 0 E9PNY9;Q9NQ32-2;Q9NQ32 E9PNY9 C11orf16 Uncharacterized protein C11orf16 1 MES(0.068)S(0.068)T(0.865)GPR 51.066 0.031777 19303000.0 1312.4 1466.2 1328.6 1555.5 1732.9 1688.1 1571.9 1515.8 2096.7 1764.8 2138.7 True False 1533.9010349006169 1540.823317353457 1517.015458008474 1936.5975698290486 1477.9927055587498 1866.73362152991 1857.4938829968307 1730.6692919428108 1621.8007977418883 1366.1304542931694 1607.6017648828113 0.9541548587516219 0.958460827184883 0.9436512767943244 1.2046500645451954 0.9193773842780587 1.1611915726317883 1.1554440431534583 1.0765534908883176 1.0088324317435122 0.8497940747115039 1.0 10.650694351014554 MESST(ph)GPR ddPTM_A549_PD325901_60min_R1 1 MESSTGPR 8 0 E9PNY9;Q9NQ32-2;Q9NQ32 E9PNY9 C11orf16 Uncharacterized protein C11orf16 1 MES(0.097)S(0.015)T(0.888)GPR 51.066 0.031777 10445000.0 2668.5 2637.0 2662.7 2815.5 2785.7 2759.6 2731.5 2755.6 3349.8 3005.6 2808.9 True False 2939.4041555541276 2859.2292445523058 2843.40683411584 2989.4070405355624 2590.042042143285 2737.1267325424633 2835.448727234151 2700.6373962736197 3209.0195552432892 2815.825903061096 2463.4231070841583 1.193219364997094 1.160673225939106 1.1542502893388262 1.213517496015529 1.0513995889277015 1.1111070301610817 1.1510197818150463 1.0962945782668416 1.302666824068911 1.1430541083111219 1.0 11.266448724950434 -11.141496551485824 1.5266333849182594 1.000358869702352 1.1750993643079855 0.036998155164286506 0.07574094634238017 0.31410820521180793 1.3161864247156874 0.05473015281736829 0.011826096316257216 7.219438955079773e-12 11.141496551485824 0.17474049460563346 METEADAPS(ph)PAPS(ph)LGER ddPTM_A549_MK2206_60min_R1 4 METEADAPSPAPSLGER 17 0 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 MET(0.237)EADAPS(0.765)PAPS(0.998)LGER;MET(0.087)EADAPS(0.915)PAPS(0.997)LGER;MET(0.01)EADAPS(0.99)PAPS(1)LGER;MET(0.105)EADAPS(0.895)PAPS(1)LGER 91.355 6.2576e-06 16249700.0 1833.67 2531.52 1965.2 2426.1 2879.71 2585.76 2230.25 2246.11 3590.97 3080.84 3129.59 True False 2143.1486670727018 2660.3635550038343 2243.8949104909334 3020.494608911769 2456.1084737287715 2859.3834069114264 2635.4575561763986 2564.502970923386 2777.621028600746 2384.8761042636943 2352.4264307100566 0.9110374883969543 1.1309019148372814 0.9538640108773289 1.2839911036027862 1.0440745103290732 1.2155038600073669 1.1203145491699444 1.090152251923694 1.180747245626869 1.013794128959792 1.0 11.199933889779803 -4.564193564326965 1.5779088254079752 1.102841727413658 1.443196776073283e-09 0.24579396569234735 0.0946276477284464 9.844434285442524 4.498144873543723 0.013461759145551701 28.824780102650166 2.7277617529686183e-05 4.564193564326965 -1.1028417259704613 METEADAPS(ph)PAPS(ph)LGER ddPTM_A549_PD325901_60min_R1 4 METEADAPSPAPSLGER 17 0 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 MET(0.082)EADAPS(0.918)PAPS(1)LGER;MET(0.05)EADAPS(0.95)PAPS(1)LGER;MET(0.354)EADAPS(0.646)PAPS(1)LGER;MET(0.001)EADAPS(0.999)PAPS(1)LGER 92.264 2.205e-05 25386000.0 2114.6000000000004 2810.2099999999996 2458.91 2760.69 2835.5699999999997 2666.71 2826.0699999999997 3033.4399999999996 3069.5 2894.09 3026.6200000000003 True False 2329.272635313757 3047.036259132854 2625.7864192270167 2931.211551318105 2636.409345385447 2644.993197904884 2933.6176403348413 2972.935659512355 2940.499589473784 2711.356663491512 2654.3649273249525 0.8775253965027254 1.1479341923808617 0.9892333914588236 1.1042986294549018 0.9932354508776602 0.9964693138748207 1.1052050944974312 1.1200176844215823 1.107797785904742 1.021470949823013 1.0 11.374151013565243 -7.7474216703942345 24.90139599739766 1.0621828718842061 1.0254904990700542 0.10444514047069298 0.07329561625989965 595.2977039217035 1057498.601320315 0.011306485784224829 0.016724618838540737 1.7888681413137527e-08 7.7474216703942345 -0.03669237281415194 METEADAPS(ph)PAPS(ph)LGERLEPR ddPTM_A549_MK2206_60min_R1 2 METEADAPSPAPSLGERLEPR 21 1 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 MET(0.002)EADAPS(0.998)PAPS(1)LGERLEPR;MET(0.065)EADAPS(0.936)PAPS(0.999)LGERLEPR 77.445 0.00012409 13627700.0 1024.1599999999999 1326.04 1341.83 1190.76 1246.9499999999998 1131.56 759.48 832.02 1822.85 1666.96 1464.65 True False 1197.0131696920266 1393.52977202522 1532.1216709464945 1482.4962534552483 1063.5253068246764 1251.3009281312634 897.467685131645 949.9613829543857 1409.9773854932994 1290.3925782459999 1100.9369827164205 1.0872676533570074 1.2657670637849445 1.3916524696683195 1.346576849291936 0.9660183312223415 1.136578158219228 0.8151853368730141 0.8628662656153835 1.2807067140340416 1.1720857764829755 1.0 10.104516176521294 -6.752715236339035 24.99935679066657 1.080947976716933 1.2808008450016337 0.3477550020788327 0.14879850142188655 223.96842311097 641784.5741908913 0.02467505150344511 0.050744526338741464 1.7671961782689413e-07 6.752715236339035 0.19985286828470072 METEADAPS(ph)PAPS(ph)LGERLEPR ddPTM_A549_PD325901_60min_R1 1 METEADAPSPAPSLGERLEPR 21 1 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 MET(0.015)EADAPS(0.992)PAPS(0.993)LGERLEPR 66.793 0.00065747 13076000.0 840.35 779.88 490.3 564.26 720.28 729.21 880.46 1271.5 989.82 865.55 880.26 True False 925.6617133670272 845.603224589098 523.5747064134134 599.1130586725617 669.6900176311037 723.2715555288049 913.966387106199 1246.138935027547 948.2213075917704 810.8990252843128 771.9936004278903 1.19905360984076 1.09535004450867 0.6782112003560825 0.7760596180337418 0.8674813071765322 0.9368880197036862 1.183904097909125 1.6141829858911443 1.2282761243955946 1.0503960458154815 1.0 9.592445077852 -7.731409069525583 6.645904862287101 1.1618256916723495 0.9114705281239636 0.32714668745811504 0.1999473931460286 0.212645864930665 29.609641857761396 0.03432963017123196 0.05045226895481477 1.8560553806363864e-08 7.731409069525583 -0.25035516354838594 METEADAPS(ph)PAPSLGER ddPTM_A549_MK2206_60min_R1 8 METEADAPSPAPSLGER 17 0 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER 207.92 7.5782e-55 115984300.0 11762.630000000001 14223.56 12750.310000000001 12934.699999999999 19936.0 15522.4 13153.509999999998 13726.589999999998 20685.699999999997 20305.199999999997 19693.899999999998 True False 13747.874375307103 14947.478450263212 14558.495682974584 16103.702080660745 17003.440809059513 17164.970065064794 15543.33250520875 15672.37616841884 16000.421978275075 15718.241217426132 14803.361106010932 0.9286995214704823 1.0097354474581965 0.9834587955206389 1.0878409278364363 1.148620282062513 1.15953194292443 1.0499867154424376 1.0587039021871216 1.0808641269838424 1.061802188358677 1.0 13.853637156784973 -6.207078859984944 7.447933421894015 1.0604540823905235 0.9769990102471219 0.45391473381145664 0.048586743335913216 0.2930392764748896 35.427877891450585 0.008282161434274772 0.021997279172550382 6.207563059322817e-07 6.207078859984944 -0.08345507214340164 METEADAPS(ph)PAPSLGER ddPTM_A549_PD325901_60min_R1 6 METEADAPSPAPSLGER 17 0 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 METEADAPS(1)PAPSLGER;METEADAPS(1)PAPSLGER;METEADAPS(0.999)PAPSLGER;METEADAPS(0.995)PAPS(0.005)LGER;METEADAPS(0.999)PAPS(0.001)LGER;METEADAPS(1)PAPSLGER 202.63 2.1335e-48 112567100.0 16600.34 16033.27 16139.75 15685.190000000002 19493.09 17762.22 17885.37 16993.16 18855.77 19243.68 19295.690000000002 True False 18285.59429627559 17384.449931665964 17235.090491201074 16654.02856264891 18123.962605909768 17617.57036936527 18566.007542599986 16654.218092923875 18063.327559606474 18028.630760653028 16922.442455456858 1.0805529015333817 1.0273014653425592 1.018475349321894 0.984138584396758 1.071001579920602 1.0410772804066624 1.0971233964286957 0.9841497843329058 1.0674184655762693 1.0653681233136334 1.0 14.046650190564625 -5.257418641217454 23.406427880152528 1.032489072512187 1.0805529494949457 0.11059577694850176 0.035661225667904035 269.5979340141442 1569273.9433341043 0.004869500768301385 0.050511513402938885 5.52816960497287e-06 5.257418641217454 0.048063876982758824 METVSNASSSS(ph)NPSS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 METVS(0.003)NAS(0.061)S(0.096)S(0.404)S(0.488)NPS(0.053)S(0.894)PGR;MET(0.005)VS(0.147)NAS(0.169)S(0.195)S(0.225)S(0.261)NPS(0.194)S(0.803)PGR 73.498 0.0025826 7303400.0 833.72 769.9300000000001 761.63 834.27 663.04 764.15 735.46 554.64 951.23 1188.5900000000001 959.78 True False 918.3586406477747 834.8147031695704 813.3187918532495 885.8009631353589 616.470357763824 757.9270157531254 763.4483327591543 543.5772700933373 911.2531110914307 1113.5422245539617 841.7331445467036 1.0910330032712874 0.9917807188395095 0.9662430392844327 1.0523536691814448 0.7323821828304151 0.9004362257367089 0.9069956882478379 0.6457833740004009 1.0825914566809243 1.3229159761240419 1.0 9.7172191165822 METVSNASSSSNPS(ph)SPGR ddPTM_A549_MK2206_60min_R1 2 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 MET(0.001)VS(0.008)NAS(0.008)S(0.007)S(0.007)S(0.007)NPS(0.482)S(0.482)PGR;MET(0.001)VS(0.008)NAS(0.028)S(0.028)S(0.028)S(0.028)NPS(0.439)S(0.439)PGR 50.305 0.0063206 16149100.0 241.26 612.5799999999999 354.12 343.63 621.17 457.87 483.36 361.85 594.38 711.49 763.62 True False 281.97878975931326 643.7577054592695 404.33954086253306 427.8193654261371 529.796715858923 506.32149949049193 571.1802552868177 413.1433456191489 459.7538790298196 550.7639148487344 573.9920791601497 0.49125902603376914 1.121544580199084 0.7044340079642774 0.7453401901505528 0.9230035310489089 0.8821053771880064 0.9951012845378524 0.7197718585658002 0.800975999011205 0.9595322563590039 1.0 9.164887018251964 -10.760334436098354 0.9293350923734385 1.0037714604398453 0.8295469948013572 0.12701382082606816 0.15832312207694252 0.9123675630597151 1.3519636133061166 0.1094561744399887 0.02563380664495453 1.7364631198092366e-11 10.760334436098354 -0.17422446563848815 METVSNASSSSNPSS(ph)PGR ddPTM_A549_MK2206_60min_R1 6 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 METVSNASSSSNPS(0.018)S(0.982)PGR;METVSNAS(0.001)S(0.003)S(0.003)S(0.003)NPS(0.183)S(0.809)PGR;METVSNASSSSNPS(0.209)S(0.791)PGR;METVSNASSSSNPS(0.001)S(0.999)PGR;METVSNASSSSNPS(0.017)S(0.983)PGR;METVSNASSSSNPS(0.025)S(0.975)PGR 299.93 7.936699999999998e-134 203685000.0 6574.37 7291.36 8383.49 6965.08 10396.01 8982.689999999999 8130.07 9235.38 11925.52 12846.82 13608.18 True False 7683.962928085626 7662.459080083413 9572.394943594363 8671.524912674322 8866.770700511177 9933.232293572953 9607.198481669348 10544.523397165058 9224.408761142196 9944.714439496016 10228.893339338378 0.7512017843156665 0.749099518968983 0.9358192158266773 0.847748101871909 0.8668357764970785 0.9710955001722065 0.9392216892830322 1.0308567161036695 0.9017992910011952 0.9722180210102042 1.0 13.320362448365657 -3.5579114447572406 0.3505081992838088 0.9661154781671631 1.828875901303306e-16 0.7002203946209105 0.04912884687675724 8.167416270535591 0.27110314073095115 0.014129401836778669 4.327769120589384 0.00027675058988899104 3.5579114447572406 -0.9661154781671629 METVSNASSSSNPSS(ph)PGR ddPTM_A549_PD325901_60min_R1 6 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 METVSNASS(0.001)S(0.001)S(0.004)NPS(0.092)S(0.903)PGR;METVSNASSSSNPS(0.158)S(0.842)PGR;METVSNASSSSNPS(0.026)S(0.974)PGR;METVSNASSSSNPSS(1)PGR;METVSNASSSSNPS(0.048)S(0.952)PGR;METVSNASSSS(0.001)NPS(0.184)S(0.815)PGR 375.47 1.517599999999999e-273 321459500.0 13701.99 13563.970000000001 14278.95 13079.779999999999 16702.07 14372.039999999999 13481.82 15740.49 15024.46 16491.760000000002 15475.42 True False 15093.005937928086 14707.053354656859 15248.005413301682 13887.688304264344 15528.974222213483 14254.99887127467 13994.87803763498 15426.53357877447 14393.034195167053 15450.467459098641 13572.041446770023 1.1120660069543211 1.0836286797633494 1.123486505188246 1.0232571392249499 1.1441885351675805 1.0503209061940482 1.0311549734447345 1.1366406180881354 1.06049147076488 1.1384040875277213 1.0 13.728350120469765 -11.254159602874294 0.2377739244128581 0.9299236080277627 1.101240033489724 0.0 0.05738535945363939 5.299073515442379 0.31722159807920175 0.26482205087038774 0.029222224590691195 5.569810212363566e-12 11.254159602874294 0.17131642546196135 MEVDRS(ph)PGLPMSDLK ddPTM_A549_MK2206_60min_R1 17 MEVDRSPGLPMSDLK 15 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 MEVDRS(0.991)PGLPMS(0.009)DLK;MEVDRS(0.99)PGLPMS(0.01)DLK;MEVDRS(0.993)PGLPMS(0.007)DLK;MEVDRS(0.998)PGLPMS(0.002)DLK;MEVDRS(0.995)PGLPMS(0.005)DLK;MEVDRS(0.998)PGLPMS(0.002)DLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(0.992)PGLPMS(0.008)DLK;MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(0.997)PGLPMS(0.003)DLK 107.78 9.145700000000001e-07 851233100.0 85070.79000000001 89755.67000000001 82845.7 76157.90000000001 105555.10000000002 78834.04000000001 74267.61 76899.04999999999 114401.6 114246.10000000002 110278.10000000002 True False 99428.65957087273 94323.85022553694 94594.46600145467 94816.58891885814 90028.08461799553 87176.20578699964 87761.07340148506 87799.72583096368 88489.82026181542 88437.82666263756 82893.00424927431 1.1994819161321828 1.1378988019530334 1.141163441452694 1.1438430755112632 1.0860757844807354 1.0516714477478095 1.0587271410452392 1.0591934340675357 1.067518556761563 1.0668913192805627 1.0 16.338962730236034 -2.0000000000002935 0.15284238941209077 0.9925916716698425 1.7270195923044904 0.8078205005842298 0.02375607654566038 14.347379744654365 0.13600703987263088 0.03500564521337642 2.3674059990279583 0.009999999999993242 2.0000000000002935 0.7344279206346479 MEVDRS(ph)PGLPMSDLK ddPTM_A549_PD325901_60min_R1 12 MEVDRSPGLPMSDLK 15 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 MEVDRS(0.997)PGLPMS(0.003)DLK;MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(0.906)PGLPMS(0.094)DLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(0.997)PGLPMS(0.003)DLK;MEVDRS(1)PGLPMSDLK;MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(0.997)PGLPMS(0.003)DLK;MEVDRS(1)PGLPMSDLK;MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(1)PGLPMSDLK 124.63 6.1364e-08 1008774400.0 66242.4 65240.00000000001 66152.20000000001 67093.9 73438.49999999999 72152.3 72371.39999999998 82562.5 81788.4 91726.20000000001 96152.59999999999 True False 72967.27968292242 70738.00375979993 70641.68609749406 71238.13782169744 68280.43310907127 71564.71559081879 75125.53323014973 80915.72616847167 78351.11797482245 85934.59207790883 84326.4397615509 0.8652953912112421 0.8388591284041534 0.8377169283708279 0.8447900566315485 0.8097155921932341 0.8486628368656578 0.8908894226126647 0.9595534496330728 0.9291405897886261 1.019070558663514 1.0 16.36369742509783 -8.456311585602478 0.6064337615015568 0.9829301325184696 0.8329443212257266 0.8627435031325765 0.025232598784754468 0.18849633368573063 0.14852971502569337 0.007505500951618349 0.009153030705896225 3.4969418808467614e-09 8.456311585602478 -0.14998581129274302 MEVEDGLGS(ph)PKPEEIK ddPTM_A549_MK2206_60min_R1 1 MEVEDGLGSPKPEEIK 16 1 A0A3B3IS46;A0A3B3IRX3;Q71F56;F8VRB8;H0YHC1 A0A3B3IS46 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 MEVEDGLGS(1)PKPEEIK 98.035 9.4289e-07 2192500.0 1825.1 1639.2 1548.4 1638.8 2809.6 1817.7 1972.3 2406.6 3229.1 3163.7 2965.3 True False 2133.132260589087 1722.628278410712 1767.9864031163058 2040.3060735685272 2396.3115618546153 2010.047807508392 2330.641380135283 2747.742919903395 2497.7140058131004 2449.017972714924 2228.934171883387 0.9570189588805351 0.7728484313895817 0.7931981237572425 0.915372961348843 1.0750930162418386 0.9017977439010493 1.0456304226185182 1.232760910826554 1.120586707907395 1.098739479885838 1.0 11.122138294126612 -6.61630713240922 3.1501385054908178 1.0603585073999653 0.8347762468517347 0.5705273824722628 0.08803860739360181 0.14837811722439032 2.9410669805450764 0.01361892585548755 0.03064118990398396 2.41931750388042e-07 6.61630713240922 -0.2255822605482306 MEVEDGLGS(ph)PKPEEIKDFSYVHK ddPTM_A549_PD325901_60min_R1 2 MEVEDGLGSPKPEEIKDFSYVHK 23 2 A0A3B3IS46;A0A3B3IRX3;Q71F56;F8VRB8;H0YHC1 A0A3B3IS46 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 MEVEDGLGS(0.992)PKPEEIKDFS(0.007)YVHK;MEVEDGLGS(0.996)PKPEEIKDFS(0.004)YVHK 56.156000000000006 0.0009651 34615000.0 2703.8 2730.7 2620.6000000000004 3078.7 3308.9 3308.2 2915.9 3564.0 3562.1 3151.1000000000004 3593.5 True False 2978.287785567641 2960.825672392482 2798.4496749479736 3268.864306764994 3076.4942790853006 3281.2591160302127 3026.866170141705 3492.913224096089 3412.397324536426 2952.139008229911 3151.5222810733476 0.9450314863562678 0.9394906360567065 0.8879675995801228 1.037233443151061 0.9761930916882193 1.0411664025782104 0.9604457465903788 1.1083257272439369 1.0827774707574744 0.9367342969329949 1.0 11.621833147197595 -6.631234323012624 0.9694850008076168 1.0407980966013208 0.9235368230113595 0.27871933196690335 0.05514954606820075 0.41442419565038585 0.7161339801752097 0.007922064119547786 0.03049077651826517 2.3375756624957731e-07 6.631234323012624 -0.1172612735899613 MEVEELS(ph)PLALGR ddPTM_A549_MK2206_60min_R1 4 MEVEELSPLALGR 13 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 MEVEELS(1)PLALGR;MEVEELS(1)PLALGR;MEVEELS(1)PLALGR;MEVEELS(1)PLALGR 107.99 7.761399999999999e-05 9070400.0 4164.25 4336.27 4175.82 4405.3 6278.880000000001 5551.85 5009.71 4975.73 7463.9 5933.3 6481.5 True False 4867.0735938623075 4556.967621293327 4768.014067334748 5484.598697761432 5355.265069582044 6139.343081980234 5919.909460263409 5681.054965034041 5773.33856739909 4592.963409144183 4871.964669700255 0.9989960773179727 0.9353449645548624 0.9786635147393417 1.1257468125479795 1.099200308837938 1.2601370285302076 1.215096960181287 1.1660706409399237 1.1850124044011778 0.942733316131942 1.0 12.250287955871634 -6.238463700419107 5.717627895555546 1.1191926047137344 0.9659416687225584 0.37925213022671056 0.08713042737636853 0.15899212146927227 17.74921457363132 0.013064152892744929 0.034128813683769445 5.774791380628246e-07 6.238463700419107 -0.153250935991176 MEVEELS(ph)PLALGR ddPTM_A549_PD325901_60min_R1 4 MEVEELSPLALGR 13 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 MEVEELS(1)PLALGR;MEVEELS(1)PLALGR;MEVEELS(1)PLALGR;MEVEELS(1)PLALGR 97.86 6.6449e-05 20504900.0 4693.570000000001 4539.0599999999995 4420.37 4790.73 5092.04 4968.860000000001 4340.33 4891.67 5193.4400000000005 5484.4800000000005 5870.76 True False 5170.057771176386 4921.582516032457 4720.362890044177 5086.642511562758 4734.392676984348 4928.395251580283 4505.50363326971 4794.101804409123 4975.177777474091 5138.188996812792 5148.69373781388 1.0041494084617233 0.9558895453203138 0.9168078604823812 0.9879481613374291 0.9195327821138877 0.9572127422115546 0.8750770317099369 0.9311297289251244 0.9662990324972285 0.9979597269645429 1.0 12.329990740837845 -9.433858703560347 1.3175001885014601 0.9914447536923864 0.9428376522834854 0.2682753537533763 0.03380042943886376 0.36142385035428554 1.2953513260166287 0.008139078750983679 0.006530632414806246 3.6824876281303545e-10 9.433858703560347 -0.04860710140890101 MEVGPFSTGQES(ph)PTAENAR ddPTM_A549_MK2206_60min_R1 1 MEVGPFSTGQESPTAENAR 19 0 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 MEVGPFST(0.002)GQES(0.499)PT(0.499)AENAR 144.68 1.1665e-20 3054800.0 1138.3 1421.0 1586.7 1177.1 2133.6 1880.7 1478.7 1726.5 2603.0 1625.5 1873.2 True False 1330.4172112369488 1493.3228304182662 1811.7179190290892 1465.4895528420275 1819.750266362829 2079.7144256923775 1747.3606493971715 1971.236662184498 2013.4246561368504 1258.2984210412199 1408.03274231004 0.9448766149104217 1.0605739380522488 1.2867015550055727 1.0408064449110204 1.292406214487114 1.477035556914938 1.2409943298125474 1.399993482360685 1.4299558494879852 0.8936570743211811 1.0 10.459465167372448 -5.575368808063304 3.0738846939396107 1.2403036935368605 0.9538242845267711 0.20441799918997672 0.1762433684393444 0.30943743911580535 5.555413141795536 0.025693751156829574 0.14998705539471174 2.6584664994196775e-06 5.575368808063304 -0.2864794090100894 MEVGPFSTGQESPT(ph)AENAR ddPTM_A549_MK2206_60min_R1 1 MEVGPFSTGQESPTAENAR 19 0 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 MEVGPFSTGQES(0.093)PT(0.907)AENAR 155.79 2.0855e-26 3498700.0 1807.9 1599.0 1956.4 1651.6 2742.4 2049.8 1997.5 1771.6 3217.6 2671.9 2401.2 True False 2113.0293210887116 1680.3822701187955 2233.8469381663267 2056.2420741431415 2338.996592835314 2266.7084754528823 2360.4198939411976 2022.729725297457 2488.818737451376 2068.3159342848594 1804.915770251371 1.1707079941987706 0.9310031514017789 1.2376460857534746 1.1392454473688642 1.2959034606415796 1.255852773194617 1.3077728794028218 1.1206781826809298 1.3789112924115887 1.1459348787211299 1.0 10.81771579730028 -5.783012165994065 24.998293068594162 1.2001858831372962 1.0508554622112591 0.22464954956539063 0.11239689714947992 306.55134493984207 355228.706436993 0.02006572234738764 0.06246595321479297 1.6481162218092043e-06 5.783012165994065 -0.1493304209260371 MEVQGEEEKREDKEDEEDEEDDDVS(ph)HVDEEDCLGVQR ddPTM_A549_MK2206_60min_R1 2 MEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQR 37 3 O75381;O75381-2 O75381 PEX14 Peroxisomal membrane protein PEX14 1 MEVQGEEEKREDKEDEEDEEDDDVS(1)HVDEEDCLGVQR;MEVQGEEEKREDKEDEEDEEDDDVS(1)HVDEEDCLGVQR 77.67699999999999 2.4408e-06 19142000.0 2150.83 2608.8999999999996 2026.71 2088.6499999999996 3254.5 2656.8 2181.48 2118.28 3823.5 3443.7999999999997 3275.1 True False 2513.837521255178 2741.6818664871325 2314.127953409871 2600.369343763062 2775.7673612100793 2937.940812558892 2577.8266784655043 2418.5526769604285 2957.483354874853 2665.8431881770243 2461.8022818383565 1.0211370506074777 1.1136888964290728 0.9400137332238521 1.0562868362528408 1.1275346447145498 1.1934105489434261 1.0471298598929344 0.9824317309326599 1.2013488559553798 1.082882735077449 1.0 11.265499181957361 -6.528385839108945 22.569655671988652 1.0941221148906397 1.0278757274799595 0.13005725947340308 0.07463213671570441 80.20007938314498 328683.36485218897 0.012844308583562466 0.026834255429291014 2.9621985218682067e-07 6.528385839108945 -0.06624638741068023 MEVQGEEEKREDKEDEEDEEDDDVS(ph)HVDEEDCLGVQR ddPTM_A549_PD325901_60min_R1 1 MEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQR 37 3 O75381;O75381-2 O75381 PEX14 Peroxisomal membrane protein PEX14 1 MEVQGEEEKREDKEDEEDEEDDDVS(1)HVDEEDCLGVQR 150.94 1.0435e-40 26693000.0 2289.4 2029.8 2625.5 2622.2 3081.4 2503.2 2636.6 3180.8 2262.2 3026.2 2861.6 True False 2521.8182026327986 2200.8583695837183 2803.6822184140674 2784.167338551714 2864.973094252905 2482.814769133316 2736.9372558028813 3117.356448710671 2167.1276010124084 2835.1252155454777 2509.6413411769845 1.0048520325418704 0.8769613145404866 1.1171645017208642 1.1093885380633635 1.1415866670849768 0.9893105952617568 1.090569082879109 1.2421521743217208 0.8635208407891694 1.1296933824878124 1.0 11.293265484584138 -8.796935100191332 24.99898785179944 0.9355515181963161 1.06803147830534 0.0012845392916114307 0.11040852617711312 173.71558557738126 122343.92826776362 0.01760954315767082 0.018747129748955135 1.5961176489787415e-09 8.796935100191332 0.13247996010902385 MFDVTSRVT(ph)Y(ph)K ddPTM_A549_PD325901_60min_R1 1 MFDVTSRVTYK 11 1 B4DV51 B4DV51 RAN 2 MFDVT(0.081)S(0.453)RVT(0.669)Y(0.797)K 46.79600000000001 0.016017 15914000.0 1346.3 1821.4 1707.0 1703.5 1709.0 1750.2 1887.5 1985.7 1881.6 1971.9 1796.6 True False 1482.975384906322 1974.895770203857 1822.8472850248756 1808.721326070798 1588.9657357299345 1735.9469514769605 1959.3298453796317 1946.0936557484854 1802.522895440257 1847.3938974734406 1575.629589585745 0.9411954400375389 1.2534010425147477 1.1569008966784684 1.147935617625927 1.008464010978428 1.1017481284629627 1.2435218647390132 1.2351212928542048 1.144001678664949 1.1724798199297248 1.0 10.621712700118263 -10.50903702141818 0.9575627689142753 1.0047530232178967 1.1409186541442875 0.0 0.10374503084636941 0.5830379402656992 1.003296550311938 0.049887132354093866 0.01633767906366977 3.0971552710685925e-11 10.50903702141818 0.13616563092639078 MFGGPGT(ph)ASRPSSSR ddPTM_A549_PD325901_60min_R1 1 MFGGPGTASRPSSSR 15 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 MFGGPGT(0.738)AS(0.261)RPSSSR 117.78 3.2371000000000003e-07 24474000.0 3180.6 3736.3 3518.0 3339.2 3681.2 3436.3 3607.4 3714.1 3727.6 4012.4 4209.3 True False 3503.492170566032 4051.171113545991 3756.7526354525558 3545.4548001265675 3422.6452114505732 3408.3159121016342 3744.681581045022 3640.019361844916 3570.941935078178 3759.05637923953 3691.5827849511757 0.949048788733142 1.0974076296109858 1.0176536337657243 0.9604158992667583 0.9271484376303485 0.9232668236496591 1.0143837478900122 0.9860321639497132 0.9673200204625526 1.0182776868944703 1.0 11.850023796450166 -6.130426966196886 5.5982019474851406 0.976807770772463 1.0309647898720296 0.18235733948103305 0.04328380020034506 0.24603809497902357 10.160754169023368 0.005630934289394055 0.015285541101811245 7.40581798062924e-07 6.130426966196886 0.054157019099566606 MFGGPGTAS(ph)RPSSSR ddPTM_A549_PD325901_60min_R1 1 MFGGPGTASRPSSSR 15 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 MFGGPGT(0.018)AS(0.981)RPS(0.001)SSR 99.11 2.9144e-06 31179000.0 4244.1 4644.2 4771.3 4512.9 4674.9 4923.6 4336.6 5054.2 5738.2 4954.1 5643.3 True False 4674.957907658713 5035.583032821318 5095.109110157699 4791.651583460469 4346.551151529468 4883.50383401438 4501.631686078577 4953.390016056802 5497.0434091280185 4641.297280528003 4949.209875826135 0.9445867168602052 1.017451908317136 1.0294792983106642 0.9681649604040349 0.8782313259253186 0.9867239330195534 0.9095657284744169 1.0008446075910185 1.1106911097017151 0.9377855045505148 1.0 12.272982506982885 -8.52890901325869 24.345863070934353 1.0524548665813653 0.9640383328557681 0.06540272977005412 0.05851783222674191 95.67270268373905 386254.97564014804 0.009503910092695647 0.010791921081124761 2.958632249029356e-09 8.52890901325869 -0.08841653372559721 MFGGPGTASRPS(ph)SSR ddPTM_A549_MK2206_60min_R1 2 MFGGPGTASRPSSSR 15 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 MFGGPGT(0.011)AS(0.148)RPS(0.63)S(0.105)S(0.105)R;MFGGPGT(0.013)AS(0.242)RPS(0.522)S(0.167)S(0.056)R 66.02199999999999 0.00098048 46614000.0 7394.200000000001 6866.5 6868.4 6844.799999999999 10378.2 7917.0 7508.6 6951.700000000001 12478.7 11403.7 11226.5 True False 8642.160189166523 7215.975520807192 7842.44239935677 8521.776307274746 8851.58052791841 8754.77168512073 8872.81542710733 7937.1247636883745 9652.29437438913 8827.596249786387 8438.650214362407 1.0241164131270362 0.8551101583196032 0.9293479644421208 1.0098506385263912 1.048933218354424 1.0374611416195791 1.0514496041091954 0.940568048451582 1.143819702108416 1.0460910246951582 1.0 13.042796538952643 -6.437546540247104 2.676393873612769 1.0548260510186183 0.9275878922026124 0.33555242641052574 0.05957892735145175 0.22230746930958575 3.092643072548724 0.009899572369401083 0.025474209260865757 3.6513499624068294e-07 6.437546540247104 -0.12723815881600586 MFGGPGTASRPS(ph)SSR ddPTM_A549_PD325901_60min_R1 2 MFGGPGTASRPSSSR 15 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 MFGGPGTAS(0.044)RPS(0.787)S(0.121)S(0.048)R;MFGGPGTAS(0.009)RPS(0.633)S(0.15)S(0.209)R 70.416 0.00052405 48079000.0 9904.6 10851.5 10997.2 11120.2 12903.4 12781.0 11164.7 11788.2 13197.8 13116.8 13048.5 True False 10910.107700618853 11765.993988342569 11743.53612353578 11807.069498193416 11997.10969831342 12676.915773527038 11589.57876805826 11553.075103336007 12643.14236258579 12288.603009472901 11443.617221256589 0.9533792934242209 1.0281708799633007 1.0262084004105003 1.031760261629663 1.0483669163652831 1.107771741087214 1.0127548435061726 1.009564972330261 1.1048204530208399 1.0738390468572074 1.0 13.48225552627367 -3.8876566430217863 0.9086710456279145 1.0481063292303314 1.542500343932132e-11 0.3835167005759854 0.03431333836301837 20.879390212384145 1.7587986318201743 0.006411714491283381 37.73643002374161 0.0001295219448472438 3.8876566430217863 -1.0481063292149064 MFGRGS(ph)RHRK ddPTM_A549_PD325901_60min_R1 2 MFGRGSRHRK 10 3 K7EP28;A0A2R8YF80;Q9HBD4;A0A2R8Y4P4;A0A2R8Y7S2;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8YFK5;A0A2R8Y6N0;A0A2R8Y7F3;A0A2R8Y7Y7;A0A2R8Y526;A0A2R8YF58;A0A2R8Y4C5;A0A2R8Y6V2;A0A2R8YDA1;A0A2R8Y523;A0A2R8Y5K3;K7EQF0;A0A0A0MT49;P51532-5;P51532-2;P51532-3;P51532-4;P51532 K7EP28 SMARCA4 Transcription activator BRG1 1 MFGRGS(1)RHRK;MFGRGS(1)RHRK 40.113 0.031512 34124000.0 12842.8 8871.8 8159.2 10982.8 12224.3 14923.8 10661.9 10267.5 10946.7 8439.900000000001 10242.9 True False 14146.591601630333 9619.457721584808 8712.932377255402 11661.182612251458 11365.707339545603 14802.26552077012 11067.64443891554 10062.706657802071 10486.648267174676 7907.003273637656 8983.08823509286 1.5748026994064248 1.0708408366741784 0.9699261711821907 1.2981262464612664 1.2652338530022367 1.647792511148267 1.2320534040486502 1.1201834374165034 1.167376740908331 0.8802099085199422 1.0 13.132995789263596 -9.399293586018066 0.7222757425043589 1.02626346996743 1.2737834175323108 0.2914414129354995 0.19248003345216744 0.6849028449415822 0.7790418766020601 0.06768828605421454 0.04550257376192372 3.987552499729724e-10 9.399293586018066 0.24751994756488083 MFS(ph)PKK ddPTM_A549_MK2206_60min_R1 2 MFSPKK 6 1 F8WAJ0;Q9H8H2-3;Q9H8H2-4;Q9H8H2-2;Q9H8H2 F8WAJ0 DDX31 Probable ATP-dependent RNA helicase DDX31 1 MFS(1)PKK;MFS(1)PKK 56.011 0.03252 15227400.0 5641.700000000001 6710.099999999999 6691.3 6036.299999999999 9553.7 7611.2 6489.2 6439.5 9859.1 9855.9 9386.8 True False 6593.881033677852 7051.615428845607 7640.22695632403 7515.193770979807 8148.363385709868 8416.612132094335 7668.203642434661 7352.318845141666 7626.029591747532 7629.445344780171 7055.7984974994 0.9345336372651157 0.9994071445414329 1.082829527945243 1.065108899246941 1.1548463846576227 1.192864582949359 1.0867945910235814 1.0420250589281077 1.080817372328621 1.0813014781366097 1.0 12.78459364504599 -5.50417997379184 2.982294736176488 1.064452864715116 0.9367901360885796 0.4027315994714826 0.05303618399365685 0.28109878325616006 4.571335763031582 0.00897875728667487 0.06424686453135343 3.1319875441430465e-06 5.50417997379184 -0.12766272862653627 MFS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 MFSPKK 6 1 F8WAJ0;Q9H8H2-3;Q9H8H2-4;Q9H8H2-2;Q9H8H2 F8WAJ0 DDX31 Probable ATP-dependent RNA helicase DDX31 1 MFS(1)PKK;MFS(1)PKK 54.408 0.034798 46087000.0 12919.0 13403.1 13444.6 13932.5 13477.3 14644.1 15290.6 16083.400000000001 14148.599999999999 15309.8 15479.0 True False 14230.527369534866 14532.626275183546 14357.031404947535 14793.078881996704 12530.70094216093 14524.843304835886 15872.492150337364 15762.603969816793 13553.983545081855 14343.13661521319 13575.181129465527 1.048275321987924 1.0705290880900176 1.057594095285032 1.089715027808187 0.9230595763442516 1.0699557645907998 1.1692287564315016 1.1611339708465007 0.9984385044898103 1.0565705516872097 1.0 13.728683827143605 -8.898676546897226 23.43800855553413 0.9992461361613243 1.0721312299449155 0.11248353475000505 0.0632143504083494 8.510309127728263 1951.8380318476259 0.011018263823043056 0.011729788462773364 1.2627676663990267e-09 8.898676546897226 0.0728850937835912 MFS(ph)PMEEK ddPTM_A549_PD325901_60min_R1 3 MFSPMEEK 8 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 MFS(1)PMEEK;MFS(1)PMEEK;MFS(1)PMEEK 54.608000000000004 0.022598 13930200.0 7085.099999999999 7105.5 7623.8 7058.9 8430.3 7241.4 6239.29 6773.0 7059.6 8213.1 10931.100000000002 True False 7804.374136225049 7704.3054217544195 8141.196913633657 7494.9122210749365 7838.1848109561515 7182.428439278521 6476.729595220492 6637.9072016842865 6762.909562420299 7694.52346434359 9586.643997952107 0.8140882396271536 0.8036498928509506 0.8492228266088502 0.7818077131763728 0.817615091645266 0.7492119704051623 0.6755992604506903 0.6924119851641797 0.7054512052252058 0.802629519359151 1.0 13.226810143192353 -10.80533274023356 1.0576955536469 0.9996778154714153 0.7628484818051214 0.1831850561056606 0.07745214830521681 0.2447090627756861 0.4870317524064914 0.04267921448619116 0.010700682524185759 1.5655511436036502e-11 10.80533274023356 -0.23682933366629388 MFTNPDNGS(ph)PAMTHR ddPTM_A549_MK2206_60min_R1 2 MFTNPDNGSPAMTHR 15 0 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2;Q9Y6R1-5;Q9Y6R1-3 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 MFTNPDNGS(1)PAMTHR;MFTNPDNGS(0.999)PAMT(0.001)HR 83.229 5.8299e-05 23331000.0 2658.1 2931.9 2539.6 2614.0 3986.8 3114.1000000000004 2697.4 3025.9 4400.200000000001 3856.3 4922.700000000001 True False 3106.7222956943983 3081.1211868425853 2899.7534676790033 3254.430117346918 3400.3470012820244 3443.631995027719 3187.4826642888565 3454.830591430104 3403.561725675518 2985.1591516833346 3700.257730391647 0.8395961908754862 0.8326774542043778 0.7836625659510708 0.8795144431743296 0.9189486919664164 0.9306465240904271 0.8614217972193746 0.9336729609546506 0.9198174758803286 0.8067435754988278 1.0 11.85341004551405 -2.00000004447157 0.061168968279165396 1.166800736929119 0.2894357185892243 0.0 0.0644187344481383 90.56019204182614 0.40189729148682934 1.1314958811626037 7.018379091636116 0.009999998976004312 2.00000004447157 -0.8773650183398947 MFTNPDNGS(ph)PAMTHR ddPTM_A549_PD325901_60min_R1 6 MFTNPDNGSPAMTHR 15 0 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2;Q9Y6R1-5;Q9Y6R1-3 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 MFTNPDNGS(0.996)PAMT(0.004)HR;MFTNPDNGS(0.991)PAMT(0.009)HR;MFTNPDNGS(0.996)PAMT(0.004)HR;MFTNPDNGS(0.994)PAMT(0.006)HR;MFTNPDNGS(0.997)PAMT(0.003)HR;MFTNPDNGS(1)PAMTHR 111.66 6.6028e-07 71807000.0 12754.300000000001 14182.4 13068.099999999999 14636.2 17157.5 15566.199999999999 14600.499999999998 14479.9 15939.9 15532.9 17051.3 True False 14049.107146780603 15377.600621137122 13954.979850869113 15540.244832778062 15952.416390161696 15439.43402815717 15156.130017200165 14191.08703523819 15270.00143549541 14552.150043138701 14954.098197096417 0.9394820711762123 1.0283201580235 0.9331876564498354 1.0391963880373245 1.0667588362673128 1.0324550383890745 1.0135101306304766 0.9489764510168606 1.0211248605054855 0.9731212040565735 1.0 13.868253291290225 -6.274129151878749 24.980972562526816 1.0132971152143426 0.9731289783586654 0.21423231013726662 0.037729695917379784 900.0686819769204 1771867.4432970998 0.004941224637237235 0.011554919279442532 5.319500427414682e-07 6.274129151878749 -0.04016813685567722 MGANS(ph)LER ddPTM_A549_MK2206_60min_R1 3 MGANSLER 8 0 A0A087X0X3;P52272-2;P52272;M0QZM1;M0R2I7;M0QY96 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGANS(1)LER;MGANS(1)LER;MGANS(1)LER 65.278 0.009025799999999999 39136000.0 5649.799999999999 6166.9 5891.3 5392.7 7708.8 5504.7 5366.9 6100.9 8168.9 8541.5 8817.400000000001 True False 6603.34811565186 6480.7688690404 6726.774926814189 6713.911742087499 6574.845731785611 6087.2037002758725 6341.996259721158 6965.7212582226475 6318.657193052755 6611.969217670613 6627.796232139945 0.9963112751762752 0.9778165535043806 1.014933877145207 1.0129930835124288 0.9920108436500261 0.9184355533981876 0.956878581898329 1.050986031291067 0.9533571901942169 0.9976120245832872 1.0 12.69431353305727 -7.010311485791036 24.856768132049602 0.9771528196269303 1.0002449247459686 0.08123937576621398 0.03263252173444489 928.2820680545287 2237711.305418458 0.004947840305971417 0.008939239696079246 9.765365756842013e-08 7.010311485791036 0.023092105119038253 MGANS(ph)LER ddPTM_A549_PD325901_60min_R1 2 MGANSLER 8 0 A0A087X0X3;P52272-2;P52272;M0QZM1;M0R2I7;M0QY96 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGANS(1)LER;MGANS(1)LER 87.789 0.004072 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 MGET(ph)EGK ddPTM_A549_MK2206_60min_R1 2 MGETEGK 7 0 B0QXZ5;O96015 B0QXZ5 DNAL4 Dynein light chain 4, axonemal 1 MGET(1)EGK;MGET(1)EGK 54.157 0.020377000000000003 22819000.0 7709.9 7691.4 7327.9 8221.1 9654.900000000001 7476.6 8138.8 9074.7 10065.5 10986.0 10481.2 True False 9011.142631042565 8082.859407374417 8367.106408806489 10235.269869059204 8234.676999768695 8267.768849434582 9617.514609666396 10361.066515103203 7785.680321300598 8504.254969891632 7878.428773595981 1.143774081101399 1.0259481477402668 1.062027296210163 1.2991511585865974 1.0452181820018043 1.0494184928273322 1.2207401864060563 1.3151183837350429 0.9882275444811759 1.0794354070183467 1.0 12.943692220617255 -8.886739766267306 19.786651740756028 0.9943988986296511 1.140338870402462 0.22175255831207652 0.09820638671654945 1.8095960358164134 307.48037914374447 0.01651755682843855 0.01758396370547691 1.2979567871062874e-09 8.886739766267306 0.14593997177281082 MGFTEVT(ph)PVTGASLR ddPTM_A549_PD325901_60min_R1 1 MGFTEVTPVTGASLR 15 0 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 MGFT(0.013)EVT(0.588)PVT(0.377)GAS(0.022)LR 47.545 0.030400999999999997 4265800.0 2402.6 2565.3 2796.6 2283.9 2844.0 2542.8 2375.1 2875.9 2438.4 3018.9 3012.9 True False 2646.510183299361 2781.486833921132 2986.3940933219483 2424.971315886759 2644.247251267369 2522.092279862654 2465.4857302045884 2818.5379184000963 2335.9225277644155 2828.2861387913044 2642.3324003467055 1.0015810966675152 1.0526634853193215 1.1302113590743155 0.9177389323041165 1.0007246820727067 0.9544947030629929 0.9330717550453105 1.0666855986893513 0.8840381049174262 1.0703748470178087 1.0 11.367596250931587 -6.272415394831827 24.983825920351013 0.9551037432103425 1.0606031333558974 0.19190004854781384 0.06407315834306276 532.3647765258276 1211779.2563903062 0.008327249410744156 0.01953457551017577 5.340533026846681e-07 6.272415394831827 0.10549939014555487 MGGAGGEGS(ph)DDDTSLT ddPTM_A549_MK2206_60min_R1 2 MGGAGGEGSDDDTSLT 16 0 F5GY11;F5H8H3;Q9Y365 F5GY11 STARD10 PCTP-like protein 1 MGGAGGEGS(1)DDDTSLT;MGGAGGEGS(1)DDDTSLT 114.72 6.5931e-08 5489700.0 1288.54 1303.6 1140.54 1669.16 1644.77 1709.1100000000001 1526.52 1176.1 2004.6799999999998 2027.63 2655.3 True False 1506.0140502216093 1369.9476718742087 1302.2857221714476 2078.104274931439 1402.8265118136437 1889.966885784601 1803.8689244050656 1342.8157766551915 1550.6231808161424 1569.5869747498066 1995.9157274481358 0.7545479147795048 0.6863755082614363 0.6524753045743449 1.0411783655757774 0.7028485684649711 0.946917176809366 0.9037801043390693 0.6727818004480777 0.7768981222462137 0.7863994221622729 1.0 10.96283509243179 -10.68320204701079 0.8331519488414981 1.0071374729800313 0.794277586178666 0.0 0.133432258566938 0.6845599054391588 0.8025192510920014 0.09325660531719517 0.02169586375045131 2.073948429047988e-11 10.68320204701079 -0.21285988680136536 MGGAGGEGS(ph)DDDTSLT ddPTM_A549_PD325901_60min_R1 3 MGGAGGEGSDDDTSLT 16 0 F5GY11;F5H8H3;Q9Y365 F5GY11 STARD10 PCTP-like protein 1 MGGAGGEGS(0.704)DDDT(0.105)S(0.105)LT(0.085);MGGAGGEGS(1)DDDTSLT;MGGAGGEGS(1)DDDTSLT 102.87 3.9033000000000003e-07 8382500.0 3662.09 2858.1 3351.2 3038.58 4154.5 3322.66 3330.92 3060.0200000000004 4211.25 3811.0099999999998 4079.15 True False 4033.862680911828 3098.9621175028215 3578.6325844026724 3226.266185484125 3862.7022522469347 3295.601358584414 3457.679983349363 2998.985500560751 4034.265807516359 3570.3821782089626 3577.4404098623477 1.1275834727508551 0.8662512194359829 1.0003332479101645 0.901836457314537 1.0797390898806232 0.9212176810825541 0.9665234321771434 0.8383048092969201 1.1276961585145142 0.998027016289656 1.0 11.804712020555446 -8.783573936383887 24.992290139221055 1.060300952038392 0.9613755938742572 0.13009928594283104 0.08769172645835221 260.047455068043 293620.19336070394 0.014730771129524135 0.015688122904629214 1.6459857219385689e-09 8.783573936383887 -0.09892535816413472 MGLLS(ph)PSGIGGVSPR ddPTM_A549_MK2206_60min_R1 3 MGLLSPSGIGGVSPR 15 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 MGLLS(0.871)PS(0.127)GIGGVS(0.002)PR;MGLLS(0.958)PS(0.042)GIGGVSPR;MGLLS(0.485)PS(0.485)GIGGVS(0.03)PR 82.65100000000001 0.00027110000000000003 12094000.0 7793.499999999999 9088.800000000001 8516.0 8658.699999999999 11316.0 8902.7 8635.2 9038.2 13433.5 12823.2 12447.5 True False 9108.852267218806 9551.381098596443 9723.696854132304 10780.08188870381 9651.431390214551 9844.777804866024 10204.104064160729 10319.392528326634 10390.83369889143 9926.430213900816 9356.442216476735 0.9735380240128111 1.020834723029275 1.0392515262915676 1.152156090882498 1.0315279212881088 1.0521924442101858 1.0905965994415332 1.1029184266380805 1.1105539326254938 1.0609193093097213 1.0 13.191744334514157 -5.554441376816758 2.2374685010248956 1.063970743716337 0.97439810810812 0.35321926291558237 0.04034270937417758 0.42863623931674816 3.6017317743140875 0.007052917720665901 0.059077125351349506 2.7897071991832036e-06 5.554441376816758 -0.08957263560821704 MGLLS(ph)PSGIGGVSPR ddPTM_A549_PD325901_60min_R1 2 MGLLSPSGIGGVSPR 15 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 MGLLS(0.987)PS(0.013)GIGGVSPR;MGLLS(0.942)PS(0.057)GIGGVS(0.001)PR 67.13600000000001 0.0011005999999999998 5458800.0 5066.4 5101.5 5411.7 4695.4 6312.7 6645.7 4927.0 5656.799999999999 6619.4 6414.5 6523.6 True False 5580.7371983134435 5531.421308715806 5778.9705051957335 4985.424193972892 5869.31772963274 6591.579622574812 5114.4996811578485 5543.970686326251 6341.209637583567 6009.4873752945805 5721.23855650761 0.9754421430243713 0.9668223504548858 1.0100908130499917 0.8713889736868657 1.0258823629993017 1.1521245893648735 0.8939497331990067 0.9690158226351658 1.1083630886830915 1.0503822408277492 1.0 12.482111785844811 -6.973847914250092 24.965602733645905 1.0407355796371291 0.9590885476092348 0.18299765977740368 0.07137795902689241 273.5126390279688 261102.37171212744 0.010905799078528924 0.020609621983343412 1.0620674178771927e-07 6.973847914250092 -0.08164703202789436 MGLS(ph)MER ddPTM_A549_MK2206_60min_R1 2 MGLSMER 7 0 A0A087X0X3;P52272-2;P52272;M0QZM1;M0R2I7 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGLS(1)MER;MGLS(1)MER 61.998999999999995 0.027610000000000003 6289200.0 1958.3000000000002 2241.3 1864.31 1930.1599999999999 2642.1 2045.4 1680.46 1981.94 3131.3 3051.9 3311.2 True False 2288.813164161749 2355.37259663368 2128.697191419373 2403.0492866481736 2253.450589968706 2261.842870373365 1985.7778297734299 2262.886064436691 2422.0655496585937 2362.4736703633957 2488.937655529042 0.9195944137360262 0.9463365188763752 0.8552633637450043 0.9654919565019752 0.9053865149907576 0.908758347300826 0.7978415310492534 0.9091774795603299 0.973132269616358 0.9491895729550666 1.0 11.281314377903673 -8.799833244207736 3.7491600787938766 0.988388178409588 0.8996760006872034 0.34996791274346073 0.04375628647969832 0.14370365341427285 4.1181934477294995 0.007509057954167847 0.008075136522370097 1.5855018597989026e-09 8.799833244207736 -0.0887121777223846 MGLS(ph)MER ddPTM_A549_PD325901_60min_R1 1 MGLSMER 7 0 A0A087X0X3;P52272-2;P52272;M0QZM1;M0R2I7 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGLS(1)MER 59.245 0.030781 3382700.0 1289.3 1047.2 1066.6 917.31 1231.5 1221.2 1383.2 1325.9 1142.6 1360.7 1269.5 True False 1420.188786867505 1135.4512191487204 1138.985889986838 973.970155337836 1145.0036884443614 1211.2549520875693 1435.838432916083 1299.4538843515722 1094.5804954985324 1274.7851697814856 1113.3595480235467 1.275588635664594 1.0198423511653456 1.0230171304577964 0.8748028945966674 1.0284222113844443 1.0879279332878655 1.2896448730017234 1.1671466658352938 0.9831329847052992 1.144989659490058 1.0 10.12070385612378 -8.795134770171819 24.63496937121436 0.9920349834066866 1.087427879814999 0.0 0.12195265738452413 254.46925184305218 186043.350432243 0.020636834797116237 0.021970294833381608 1.6027479491062878e-09 8.795134770171819 0.09539289640831239 MGPSGGEGMEPERRDS(ph)QDGSSYR ddPTM_A549_MK2206_60min_R1 17 MGPSGGEGMEPERRDSQDGSSYR 23 2 C9J9W2;Q14847;Q14847-2;Q14847-3 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 MGPSGGEGMEPERRDS(0.968)QDGS(0.014)S(0.017)YR;MGPSGGEGMEPERRDS(0.984)QDGS(0.008)S(0.008)YR;MGPSGGEGMEPERRDS(0.512)QDGS(0.244)S(0.244)YR;MGPSGGEGMEPERRDS(0.972)QDGS(0.023)S(0.006)YR;MGPSGGEGMEPERRDS(0.996)QDGS(0.003)SYR;MGPSGGEGMEPERRDS(0.936)QDGS(0.052)S(0.012)YR;MGPSGGEGMEPERRDS(0.953)QDGS(0.04)S(0.007)YR;MGPS(0.001)GGEGMEPERRDS(0.72)QDGS(0.139)S(0.139)Y(0.002)R;MGPSGGEGMEPERRDS(0.998)QDGS(0.001)SYR;MGPS(0.002)GGEGMEPERRDS(0.988)QDGS(0.004)S(0.004)Y(0.002)R;MGPSGGEGMEPERRDS(0.997)QDGS(0.002)SYR;MGPSGGEGMEPERRDS(0.672)QDGS(0.148)S(0.179)Y(0.001)R;MGPS(0.003)GGEGMEPERRDS(0.984)QDGS(0.009)S(0.004)Y(0.001)R;MGPSGGEGMEPERRDS(1)QDGSSYR;MGPSGGEGMEPERRDS(0.992)QDGS(0.007)S(0.001)YR;MGPSGGEGMEPERRDS(1)QDGSSYR;MGPSGGEGMEPERRDS(0.996)QDGS(0.003)S(0.001)YR 271.6 7.000499999999999e-125 2322116000.0 56987.65 58118.65000000001 53699.96 49538.87000000001 74559.35 59594.21 56205.87 57735.47000000001 80356.32 82758.52 81339.72 True False 66605.77210572548 61076.64104017494 61315.42180824685 61675.89537388442 63591.768383173745 65900.42974676503 66417.74903843446 65919.64967996131 62155.7418226749 64063.31285371167 61140.82266193194 1.0893829884169384 0.9989502656496482 1.0028556885353068 1.0087514804128672 1.040086894721615 1.0778466313930801 1.086307742466607 1.0781609865548114 1.0165996974943368 1.047799327266811 1.0 15.899848343653705 -8.953723253660844 10.24656362205221 1.0073002074125186 1.0455394051258462 0.06967953077075029 0.03406068602101557 0.5176628643194842 111.25482432348375 0.00602829164795604 0.006377315287441083 1.112440384073574e-09 8.953723253660844 0.03823919771332762 MGPSGGEGMEPERRDS(ph)QDGSSYR ddPTM_A549_PD325901_60min_R1 16 MGPSGGEGMEPERRDSQDGSSYR 23 2 C9J9W2;Q14847;Q14847-2;Q14847-3 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 MGPSGGEGMEPERRDS(0.999)QDGSS(0.001)YR;MGPSGGEGMEPERRDS(0.647)QDGS(0.107)S(0.246)Y(0.001)R;MGPSGGEGMEPERRDS(0.926)QDGS(0.057)S(0.017)YR;MGPSGGEGMEPERRDS(0.867)QDGS(0.109)S(0.024)YR;MGPSGGEGMEPERRDS(0.834)QDGS(0.13)S(0.036)YR;MGPSGGEGMEPERRDS(0.978)QDGS(0.016)S(0.007)YR;MGPSGGEGMEPERRDS(0.982)QDGS(0.009)S(0.009)YR;MGPSGGEGMEPERRDS(0.924)QDGS(0.033)S(0.043)YR;MGPS(0.006)GGEGMEPERRDS(0.575)QDGS(0.34)S(0.073)Y(0.006)R;MGPSGGEGMEPERRDS(0.989)QDGS(0.005)S(0.006)YR;MGPSGGEGMEPERRDS(0.951)QDGS(0.041)S(0.008)YR;MGPSGGEGMEPERRDS(0.991)QDGS(0.004)S(0.004)YR;MGPSGGEGMEPERRDS(0.869)QDGS(0.113)S(0.018)YR;MGPSGGEGMEPERRDS(1)QDGSSYR;MGPSGGEGMEPERRDS(0.999)QDGS(0.001)SYR;MGPSGGEGMEPERRDS(1)QDGSSYR 213.09 4.115399999999999e-74 3726466000.0 70689.71 74924.59 74069.37 75737.05999999998 82730.81 74797.57999999999 75937.0 77869.64 84178.09 86181.66 83382.59000000001 True False 77866.07732018598 81238.74814717147 79096.16286350504 80415.16618485686 76920.08331140048 74188.4533075386 78826.82408932097 76316.46894264923 80640.37761449328 80740.13527974595 73127.06003578784 1.0648052483181862 1.1109259432474632 1.0816264570843674 1.0996636012100347 1.0518689425467995 1.0145143708940483 1.0779432955563057 1.043614619612774 1.102743328872082 1.104107497829563 1.0 16.158117741342128 -6.783123165175232 12.381020518473306 1.0490205929693786 1.0902571945564903 0.16890748844302805 0.03251043931519422 1.0414720316584398 592.7295452560066 0.005607697294901661 0.010678249273712661 1.647695041751904e-07 6.783123165175232 0.04123660158711173 MGQAPSQSLLPPAQDQPRS(ph)PVPSAFSDQSR ddPTM_A549_MK2206_60min_R1 7 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR 30 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MGQAPSQSLLPPAQDQPRS(0.913)PVPS(0.082)AFS(0.004)DQS(0.001)R;MGQAPSQSLLPPAQDQPRS(0.917)PVPS(0.053)AFS(0.022)DQS(0.007)R;MGQAPSQSLLPPAQDQPRS(0.941)PVPS(0.054)AFS(0.004)DQSR;MGQAPS(0.025)QS(0.062)LLPPAQDQPRS(0.904)PVPS(0.007)AFS(0.002)DQSR;MGQAPS(0.001)QS(0.003)LLPPAQDQPRS(0.946)PVPS(0.045)AFS(0.005)DQSR;MGQAPSQSLLPPAQDQPRS(0.999)PVPS(0.001)AFSDQSR;MGQAPSQSLLPPAQDQPRS(0.988)PVPS(0.012)AFS(0.001)DQSR 191.65 1.1117999999999998e-67 627410000.0 14518.600000000002 17508.1 17006.399999999998 14950.439999999999 21266.600000000002 17650.1 16317.600000000002 16113.88 23768.699999999997 24032.200000000004 24147.399999999998 True False 16968.984734309746 18399.187506858587 19418.163243320287 18613.298471150745 18138.311311694673 19517.821866811824 19282.296701564406 18398.071836687846 18385.127400814414 18603.30932891223 18150.934145663818 0.934882171800704 1.013677167202663 1.0698161916894622 1.0254733074218874 0.9993045628468571 1.0753067423515803 1.0623308170709698 1.013615700935319 1.012902545580914 1.0249229697831548 1.0 14.147756178604437 -3.9377261021996204 13.15366280975004 1.015808680821628 0.5460065709658615 0.0 0.03800336502163655 0.0 0.0 0.004925104167053702 0.0 0.00011541809390788552 3.9377261021996204 -0.46980210985576654 MGQAPSQSLLPPAQDQPRS(ph)PVPSAFSDQSR ddPTM_A549_PD325901_60min_R1 11 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR 30 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MGQAPS(0.017)QS(0.015)LLPPAQDQPRS(0.854)PVPS(0.083)AFS(0.016)DQS(0.016)R;MGQAPSQSLLPPAQDQPRS(0.965)PVPS(0.034)AFS(0.002)DQSR;MGQAPSQSLLPPAQDQPRS(0.995)PVPS(0.004)AFS(0.001)DQSR;MGQAPSQSLLPPAQDQPRS(0.993)PVPS(0.006)AFSDQSR;MGQAPS(0.021)QS(0.063)LLPPAQDQPRS(0.776)PVPS(0.057)AFS(0.073)DQS(0.01)R;MGQAPS(0.05)QS(0.044)LLPPAQDQPRS(0.752)PVPS(0.101)AFS(0.038)DQS(0.015)R;MGQAPS(0.002)QS(0.004)LLPPAQDQPRS(0.919)PVPS(0.064)AFS(0.008)DQS(0.003)R;MGQAPSQSLLPPAQDQPRS(0.99)PVPS(0.01)AFSDQSR;MGQAPSQSLLPPAQDQPRS(0.999)PVPS(0.001)AFSDQSR;MGQAPSQSLLPPAQDQPRS(0.988)PVPS(0.004)AFS(0.008)DQSR;MGQAPSQSLLPPAQDQPRS(0.997)PVPS(0.002)AFS(0.001)DQSR 239.86 5.391799999999999e-121 1065027000.0 32106.100000000002 35372.96000000001 36370.240000000005 38046.4 45817.0 43836.6 38831.39 43767.1 42041.1 41126.399999999994 43716.7 True False 35365.487636738406 38353.96348061391 38838.543198420135 40396.43971835631 42598.97198006927 43479.60926357843 40309.13979580192 42894.13085587426 40274.25876886344 38529.67208532466 38339.82304299405 0.922421775319092 1.0003688185415984 1.013007888817505 1.0536417884103424 1.1110894260596622 1.134058683964729 1.0513647846157113 1.1187879194896917 1.0504549988063356 1.004951745398452 1.0 15.22655605782875 -5.334870003923473 1.4329331824678844 1.0480550434862372 0.8854340415246101 0.4629134248479919 0.04388733376522345 0.9232069557963325 1.860457888311324 0.00742441297066452 0.20540867754275433 4.625194452521473e-06 5.334870003923473 -0.1626210019616271 MGQEEES(ph)PPREERPQQSPK ddPTM_A549_PD325901_60min_R1 1 MGQEEESPPREERPQQSPK 19 2 H7BZ54;G5E9H3;Q49AM3 H7BZ54 TTC31 Tetratricopeptide repeat protein 31 1 MGQEEES(0.995)PPREERPQQS(0.005)PK 48.983999999999995 0.006899 15916000.0 1217.1 1066.9 870.45 1283.3 1264.1 1147.3 1053.9 1240.8 1445.4 1429.1 1729.5 True False 1340.6590960183353 1156.8114072858757 929.5239714410683 1362.5665264142388 1175.313976908256 1137.9567691861025 1094.006741216208 1216.0512706112304 1384.6548645138967 1338.8663821082675 1516.7824642037992 0.8838835677877408 0.7626745657908945 0.6128261589106655 0.8983269246387862 0.7748731308844677 0.7502438853573161 0.7212680572427913 0.8017308343880208 0.9128895521881841 0.8827016488558069 1.0 10.566798474849202 -8.916814194673421 1.5589238879708325 0.9702992618588405 0.7680955741666388 0.43171928573171914 0.07818865781745249 0.1771059032635046 0.8586346311099984 0.014804357116774521 0.014983974672489334 1.2111161776776416e-09 8.916814194673421 -0.20220368769220176 MGRS(ph)RS(ph)PATAK ddPTM_A549_PD325901_60min_R1 1 MGRSRSPATAK 11 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 MGRS(0.987)RS(0.989)PAT(0.024)AK 42.568000000000005 0.017467 19493000.0 1297.1 1737.1 1782.1 1623.7 2229.8 2540.0 2293.1 2528.6 2449.9 1827.5 2395.1 True False 1428.780637125449 1883.4915133529794 1903.0440226378626 1723.9922613097465 2073.1865403923966 2519.3150821343174 2380.3651753324675 2478.1650893516744 2346.939222756742 1712.1113381168998 2100.5178837898366 0.6802039859558763 0.8966795892995256 0.9059880124440151 0.8207462905287206 0.9869882834093621 1.199378068416571 1.1332277595455267 1.1797876649735883 1.117314563645753 0.8150901029358729 1.0 11.036529353631042 -6.917689058173088 3.965105287954599 1.0830186819020364 0.8373173385273555 0.5122377295248159 0.11251483632191023 0.11188252699824619 3.4147253791786607 0.01297226153149452 0.02521851856329249 1.2086789032414148e-07 6.917689058173088 -0.24570134337468097 MGS(ph)DGESDQASATSSDEVQS(ph)PVRVR ddPTM_A549_PD325901_60min_R1 1 MGSDGESDQASATSSDEVQSPVRVR 25 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4 E5RGN0 CDK16 Cyclin-dependent kinase 16 2 MGS(0.996)DGES(0.003)DQAS(0.015)AT(0.013)S(0.012)S(0.011)DEVQS(0.949)PVRVR 55.043 0.0024878 4685200.0 572.97 625.39 662.97 829.02 454.06 634.97 602.29 507.7 651.23 639.02 445.93 True False 631.1374926017793 678.0938101063956 707.9631309624732 880.2266825589742 422.16839202196246 629.7990148436327 625.2104755357342 497.573525217055 623.8610678133285 598.6721681441646 391.0834369831746 1.6138180063834624 1.7338852684154173 1.810261095237668 2.25073884322246 1.0794842023445888 1.6103955199481594 1.598662629025203 1.2722950607556973 1.5952121946810256 1.5308042006645275 1.0 8.611332626668306 -12.595221196537603 0.1702911674535833 1.5561083969566295e-14 1.8404069720879634 0.15726815062050803 0.30395156186655525 15.819199434227823 0.3599417148751488 6.499298378941396 0.4290810554843112 2.5396788570698153e-13 12.595221196537603 1.840406972087948 MGS(ph)GVER ddPTM_A549_PD325901_60min_R1 1 MGSGVER 7 0 A0A087X0X3;P52272-2;P52272;M0QZM1;M0R2I7 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGS(1)GVER 44.753 0.027391000000000002 5069500.0 1744.8 1701.9 1319.7 1557.3 1774.6 1793.0 1242.1 1421.8 1310.2 1950.8 2254.6 True False 1921.9308115461283 1845.3250858185702 1409.2627780007792 1653.490884115088 1649.9582180376474 1778.3984024672561 1289.3687952032005 1393.4410836194766 1255.136850343232 1827.6261550743882 1977.2984930869545 0.9719983190527869 0.9332556982520389 0.7127213129063994 0.8362373662327842 0.8344507537967805 0.8994081615319617 0.6520860657665503 0.704719640707377 0.63477358362 0.924304631528395 1.0 10.94931496149064 -4.030016090773005 12.549610703951842 0.8181352192613944 0.9822180594291179 0.0 0.12564071871278146 0.0 0.0 0.019984894926413244 0.0 9.332197240166025e-05 4.030016090773005 0.16408284016772345 MGS(ph)KSPGNTSQPPAFFSK ddPTM_A549_MK2206_60min_R1 2 MGSKSPGNTSQPPAFFSK 18 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;H7C184;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 MGS(0.447)KS(0.447)PGNT(0.094)S(0.013)QPPAFFSK;MGS(0.469)KS(0.469)PGNT(0.055)S(0.007)QPPAFFSK 76.186 0.00010406 169663000.0 5006.9 5626.9 6658.9 5729.1 6850.1 5913.7 5136.5 5340.7 8038.3 7031.5 8784.7 True False 5851.942313047775 5913.285175566883 7603.232149128887 7132.729757189071 5842.459364272599 6539.483808803641 6069.735562067065 6097.76058020779 6217.637884527406 5443.079266411164 6603.216544614035 0.8862260193209864 0.8955158649749415 1.1514437089497727 1.080190193521207 0.884789908796501 0.9903482287185662 0.9192089220544936 0.923453068517263 0.9416074488120294 0.8243072492982005 1.0 12.688953242852335 -6.760277379514773 24.999995084283693 0.9602950937856837 1.006220477074206 0.07734788003907245 0.08701281813157838 72.74243743474392 1564969.3257335282 0.01143780421702371 0.022808215518443826 1.7366912672202065e-07 6.760277379514773 0.04592538328852236 MGS(ph)KSPGNTSQPPAFFSK ddPTM_A549_PD325901_60min_R1 2 MGSKSPGNTSQPPAFFSK 18 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;H7C184;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 MGS(0.486)KS(0.486)PGNT(0.023)S(0.005)QPPAFFSK;MGS(0.493)KS(0.493)PGNT(0.011)S(0.002)QPPAFFSK 88.62700000000001 1.5699e-06 394340000.0 6485.3 7281.0 6794.8 7079.6 8551.8 8241.3 8175.400000000001 8309.6 8356.7 7755.9 8829.3 True False 7143.682881774475 7894.59542267172 7255.935988451691 7516.890813061824 7951.151070108389 8174.185585194308 8486.51932075054 8143.858509244903 8005.496960207059 7266.191150369828 7743.352073544154 0.9225568996380131 1.0195320253671925 0.9370536066986075 0.970754105156079 1.026835793412287 1.0556391479501668 1.0959748749828233 1.0517226172718033 1.0338541866846718 0.9383779894492221 1.0 12.918742524543223 -6.746361884003927 5.274724486952643 1.0290109586370628 0.9640736059712433 0.3566406099308913 0.04298622133259928 0.13913685577383234 10.965193206366543 0.005297059173188422 0.010829381914251786 1.7932387543551405e-07 6.746361884003927 -0.06493735266581957 MGS(ph)SPLEVPKPR ddPTM_A549_PD325901_60min_R1 1 MGSSPLEVPKPR 12 1 Q8NCE2-2;Q8NCE2 Q8NCE2-2 MTMR14 Myotubularin-related protein 14 1 MGS(0.865)S(0.135)PLEVPKPR 72.321 0.00045416 18395000.0 4394.1 4730.1 3908.3 4337.6 5320.4 5400.7 4744.8 5717.1 5053.3 4966.2 5616.8 True False 4840.185797234547 5128.722127287394 4173.54074051712 4605.523700595654 4946.713458383577 5356.718489796379 4925.365960454185 5603.067955521811 4840.927374324115 4652.633284463003 4925.969207828794 0.9825854756749367 1.0411600054536205 0.8472527059008312 0.9349477242521412 1.004211201832487 1.0874445746195487 0.9998775373232844 1.1374549289948688 0.9827360200771204 0.9445112399542853 1.0 12.266191894258696 -6.818468917087772 6.995480266741169 1.0116988654858818 0.9505277268918529 0.20210958742808693 0.06562127376458758 0.29870139527877165 29.45439652757929 0.009291624743762631 0.017735498289442816 1.518906647885832e-07 6.818468917087772 -0.061171138594028895 MGS(ph)VER ddPTM_A549_MK2206_60min_R1 1 MGSVER 6 0 A0A087X0X3;P52272-2;P52272;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGS(1)VER 42.835 0.049581 17082000.0 1726.0 1876.0 1883.4 1907.7 2733.8 1663.6 1562.1 1618.8 2385.9 2159.8 2986.5 True False 2017.3066033514676 1971.4803869561338 2150.4944404735534 2375.0865856399064 2331.6616414429627 1839.6410477916936 1845.9133498500864 1848.269857367081 1845.4974594993905 1671.8996799537547 2244.869626793152 0.8986297374575096 0.878215983425478 0.9579596136928381 1.0580064683011337 1.0386623853848453 0.8194868093162556 0.8222808700418903 0.8233306002751604 0.8220956074566015 0.744764711500018 1.0 11.132415946002403 -7.261271330361732 24.999838139022906 0.8924714018945462 0.9660335878895826 0.25409354881892987 0.0849709518089217 26.443107578023042 3933740.6796094603 0.014126686134368193 0.02353404309740947 5.479345297022526e-08 7.261271330361732 0.07356218599503639 MGS(ph)VER ddPTM_A549_PD325901_60min_R1 1 MGSVER 6 0 A0A087X0X3;P52272-2;P52272;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGS(1)VER 40.021 0.05770700000000001 41025000.0 4760.9 4839.7 4541.2 4641.1 5558.5 4486.9 4511.1 5309.3 5152.9 5512.7 5661.8 True False 5244.223063210661 5247.558503928627 4849.3931404539935 4927.770206297142 5168.09013578399 4450.360174026955 4682.7723790686405 5203.401846434725 4936.341532692446 5164.627181196731 4965.434493107298 1.0561458560152912 1.0568175879095687 0.9766301714755504 0.9924147047227309 1.0408132748419108 0.8962680265351729 0.9430740422754481 1.047924779524885 0.9941409033881653 1.0401158626432268 1.0 12.277704248865886 -5.753182652809805 24.506074432907184 0.9917734345860295 1.0564817731088378 0.25448136494568663 0.042309489581226344 133.93594281258996 397511.20880617626 0.005303816091620464 0.019841022114960923 1.7652952279051686e-06 5.753182652809805 0.06470833852280833 MGSDEFDIS(ph)PR ddPTM_A549_MK2206_60min_R1 1 MGSDEFDISPR 11 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 MGS(0.001)DEFDIS(0.999)PR 51.286 0.0088338 1704600.0 461.58 492.43 346.05 342.89 666.64 483.92 596.55 484.87 567.24 535.37 736.41 True False 539.4834194524739 517.4925836614126 395.12509351485244 426.89806539291703 568.5781390926683 535.1280931999017 704.9354131317257 553.6018073520981 438.76104569614546 414.4295451693866 553.5390731179459 0.974607657619723 0.9348799548088041 0.7138160840014645 0.7712157752266845 1.027168932971635 0.966739511604231 1.2735061486463861 1.0001133329826184 0.792646927749319 0.7486906801989777 1.0 9.11254134707768 -5.299478408915522 5.876233581877972 0.9230679141305697 0.9751453087488277 0.009392275884134604 0.15426018272279413 0.9139879845438525 91.64423890681151 0.021527504838981852 0.14182057006628923 5.01789525038026e-06 5.299478408915522 0.052077394618258 MGSDEFDIS(ph)PR ddPTM_A549_PD325901_60min_R1 1 MGSDEFDISPR 11 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 MGS(0.006)DEFDIS(0.994)PR 44.61600000000001 0.019243 2590300.0 607.91 330.64 848.71 575.44 503.48 601.54 732.27 354.35 582.95 659.88 609.0 True False 669.624575680311 358.5041931811808 906.3085643078277 610.983621880939 468.11730171170694 596.6412576799514 760.1369355635194 347.28221126780255 558.4506387632322 618.2150641841746 534.0968607690744 1.253751191714707 0.6712344136697446 1.6968992534477472 1.1439565868279984 0.8764651809367312 1.1171030977804588 1.4232192536555222 0.6502232774177562 1.0455980549278823 1.1574961577081242 1.0 9.060957594382607 -8.243477488415959 24.967060332194066 0.9942858447775055 1.1559055615005485 0.10930314846020683 0.2756856483718858 1690.172276669225 2349345.435184084 0.04110812472698307 0.05301661032650908 5.708506653566511e-09 8.243477488415959 0.16161971672304298 MGSDGESDQASATSSDEVQS(ph)PVRVR ddPTM_A549_MK2206_60min_R1 2 MGSDGESDQASATSSDEVQSPVRVR 25 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 MGSDGES(0.003)DQAS(0.014)AT(0.014)S(0.054)S(0.054)DEVQS(0.862)PVRVR;MGSDGESDQASATSS(0.001)DEVQS(0.999)PVRVR 86.304 6.7938e-08 12339600.0 1182.32 1187.71 1259.5900000000001 952.88 1527.28 1331.5500000000002 1111.06 857.12 2424.6000000000004 1842.9299999999998 2353.9 True False 1381.8667110512786 1248.159365880421 1438.2188023128824 1186.3356427764086 1302.6191351755815 1472.4537371886454 1312.9252202064122 978.6193848199116 1875.43197129059 1426.6108330295272 1769.3616656649594 0.7809973155103634 0.7054291895780048 0.8128461411943005 0.6704879312113735 0.7362085211030232 0.8321948902601942 0.7420332686551057 0.5530917753053771 1.0599483461657158 0.8062856004588411 1.0 10.789013256337284 -8.780699128237346 24.991037689244646 1.0283089830433243 0.7333022282057298 0.4724366571302119 0.09851708272533849 74.46155048470342 96619.31329454826 0.012268452486324867 0.013070325543624216 1.6569174499134657e-09 8.780699128237346 -0.29500675483759453 MGSDGESDQASATSSDEVQS(ph)PVRVR ddPTM_A549_PD325901_60min_R1 2 MGSDGESDQASATSSDEVQSPVRVR 25 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 MGSDGESDQASAT(0.001)S(0.002)S(0.005)DEVQS(0.993)PVRVR;MGSDGESDQAS(0.001)AT(0.011)S(0.037)S(0.037)DEVQS(0.914)PVRVR 84.93799999999999 2.3908e-07 14038300.0 1452.88 2128.24 2098.25 2216.27 2305.9 2321.1 2007.4 2043.1000000000001 2229.65 2483.2 2328.3 True False 1600.3753080462743 2307.5942538589297 2240.6498628022523 2353.1639643856333 2143.941538923144 2302.1977311582527 2083.792705491429 2002.3487677190562 2135.9455643167344 2326.4103282144365 2041.9338603097467 0.7837547234774337 1.1301023498914329 1.0973175509525865 1.152419287483031 1.0499564068142362 1.1274595009698434 1.020499608726471 0.9806139202840362 1.0460405235616823 1.1393171803623143 1.0 10.995720421715966 -9.499080299336347 0.5319464130878087 1.0051405377120852 1.0580753282189008 0.0 0.10411496942744325 2.335125096585723 1.4825511527719808 0.05003776247403582 0.026738962781653643 3.1689814766989445e-10 9.499080299336347 0.0529347905068156 MGSKS(ph)PGNTSQPPAFFSK ddPTM_A549_PD325901_60min_R1 2 MGSKSPGNTSQPPAFFSK 18 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;H7C184;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 MGS(0.007)KS(0.525)PGNT(0.401)S(0.067)QPPAFFSK;MGS(0.182)KS(0.692)PGNT(0.12)S(0.005)QPPAFFSK 150.06 1.1089e-17 148489000.0 24228.0 23584.0 25183.0 25313.0 28480.0 27631.0 26799.0 30954.0 28246.0 26061.0 30225.0 True False 26687.608724289068 25571.50644805521 26892.069817681004 26876.526520005937 26479.663050666186 27405.982297028866 27818.85060997548 30336.598187056763 27058.918848110923 24415.504012401907 26507.516612061216 1.0067940016736954 0.9646888775850051 1.0145073267800881 1.0139209535674427 0.9989492202607031 1.0338947513687056 1.0494702697768976 1.1444526709549725 1.0208017312266369 0.9210785140578798 1.0 14.694113895500124 -5.924156001595891 6.40165718371419 1.0233262621253605 0.9859123734110227 0.07255815273450394 0.05049339870936725 0.36532791184544344 24.33411202330709 0.005963677168823001 0.018898231323677954 1.1908141824634908e-06 5.924156001595891 -0.03741388871433782 MGSKSPGNT(ph)SQPPAFFSK ddPTM_A549_MK2206_60min_R1 2 MGSKSPGNTSQPPAFFSK 18 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;H7C184;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 MGS(0.074)KS(0.356)PGNT(0.564)S(0.005)QPPAFFSK;MGS(0.021)KS(0.081)PGNT(0.882)S(0.016)QPPAFFSK 160.77 3.4047e-23 70688000.0 12529.9 14264.5 14996.8 13552.3 17654.7 13529.9 14336.0 12909.599999999999 19220.6 21625.0 23572.0 True False 14644.640793356632 14990.502121394338 17123.57174519154 16872.614108385857 15057.717017039677 14961.625037579248 16940.665631810272 14739.575333991885 14867.164788991146 16739.897480785243 17718.42184589593 0.8265206078016892 0.8460404798899485 0.9664275912449747 0.952263934967437 0.8498339834101791 0.8444107024714941 0.9561046564502128 0.8318785647044504 0.8390795138696163 0.9447736162045752 1.0 14.112962490412352 -10.886107698399385 1.1279555916721862 1.0002099260620498 0.8787668812798448 0.29749142293284536 0.05325049250710201 0.3944324561547156 0.8886828340365365 0.03745808328755868 0.00893528179341358 1.2998471958074608e-11 10.886107698399385 -0.12144304478220502 MGSS(ph)PLEVPKPR ddPTM_A549_MK2206_60min_R1 1 MGSSPLEVPKPR 12 1 Q8NCE2-2;Q8NCE2 Q8NCE2-2 MTMR14 Myotubularin-related protein 14 1 MGS(0.269)S(0.731)PLEVPKPR 42.681999999999995 0.022438 6094900.0 1897.1 1950.5 1719.8 1832.9 3017.5 2477.1 2072.1 2008.0 3588.8 3077.7 3162.6 True False 2217.2841003580925 2049.772118740908 1963.693500438788 2281.960582282009 2573.6297472580795 2739.225077834097 2448.5737483031567 2292.640149242093 2775.942530135969 2382.4454324445187 2377.2391366804036 0.9327139479347148 0.8622490211915435 0.8260395305374729 0.9599205006647155 1.0826128964256905 1.1522715723329264 1.0300073351990853 0.964412925004909 1.1677169903959759 1.0021900597562032 1.0 11.215071322124071 -6.577381150953809 3.5144684966327686 1.0739739327108981 0.8736194262621431 0.6035600481753715 0.06455959624599164 0.1242732692845457 3.1447326714617683 0.010781346708608988 0.024245753369989298 2.6461767484875685e-07 6.577381150953809 -0.20035450644875508 MGSS(ph)PLEVPKPR ddPTM_A549_PD325901_60min_R1 1 MGSSPLEVPKPR 12 1 Q8NCE2-2;Q8NCE2 Q8NCE2-2 MTMR14 Myotubularin-related protein 14 1 MGS(0.132)S(0.868)PLEVPKPR 54.598 0.004608600000000001 19333000.0 4414.2 4875.3 4389.0 4546.0 5324.5 5364.4 4514.4 4881.4 5333.2 5080.7 4955.7 True False 4862.326334437708 5286.158640866836 4686.863933201044 4826.796095284914 4950.525488527814 5320.714104961148 4686.1979623744655 4784.036647615778 5109.06415070258 4759.9037349223145 4346.180316770609 1.1187585373932705 1.2162768812120224 1.0783869033495548 1.1105834879100052 1.1390520244696745 1.224227647534573 1.0782336720572383 1.1007450908457737 1.175529724569464 1.0951924190893025 1.0 12.085532315765317 -10.86757309118408 0.9449592154955311 0.9938631629233178 1.1402181720606772 0.22722589603598498 0.054645193262084904 0.3806247424824841 0.5601202051361573 0.040273965030035774 0.008231066461631228 1.356522210202401e-11 10.86757309118408 0.14635500913735944 MHDGELEEQEEDDEKS(ph)DSEGGDLDK ddPTM_A549_MK2206_60min_R1 1 MHDGELEEQEEDDEKSDSEGGDLDK 25 1 Q9NU22 Q9NU22 MDN1 Midasin 1 MHDGELEEQEEDDEKS(0.836)DS(0.164)EGGDLDK 129.73 4.6363e-24 6592300.0 349.86 424.82 633.14 334.12 701.66 446.03 594.61 735.4 839.37 563.61 830.55 True False 408.9078147442318 446.44152344707123 722.9287724548292 415.97941499921694 598.4467434833815 493.22859854924826 702.6429402434927 839.6452020680454 649.2540351984584 436.2901095558553 624.3015129861219 0.6549845006595744 0.7151056247031641 1.1579801705060095 0.666311720132679 0.9585860854652212 0.7900486996901009 1.1254865247445145 1.3449353951617133 1.0399687037325684 0.6988451901534218 1.0 9.286099151924935 -7.757338668270658 24.999537735612517 1.0562644992143229 0.8330469832147516 0.23543937288600303 0.1944479345388178 99.73269142643846 608005.8028608398 0.02492400680820352 0.03622520180502684 1.7484826681929042e-08 7.757338668270658 -0.2232175159995713 MHDGELEEQEEDDEKS(ph)DSEGGDLDK ddPTM_A549_PD325901_60min_R1 1 MHDGELEEQEEDDEKSDSEGGDLDK 25 1 Q9NU22 Q9NU22 MDN1 Midasin 1 MHDGELEEQEEDDEKS(0.829)DS(0.171)EGGDLDK 114.31 2.9682e-17 6754600.0 564.69 617.96 639.65 503.4 682.02 340.12 597.48 510.36 583.37 771.92 708.11 True False 622.0169130971937 670.037657930809 683.0604955279213 534.4938746956498 634.1172680412693 337.35017548642645 620.217428353601 500.1804694303253 558.8529876238218 723.1808394633082 621.0169590791287 1.0016101879400325 1.0789361677406852 1.099906348034027 0.8606751665658549 1.0210949294872178 0.5432221625423308 0.9987125460684467 0.8054215945600179 0.8998997200535612 1.1645106126178464 1.0 9.278488856683087 -6.25742885908591 24.74427071992552 0.9152504531450741 1.0620294325470112 0.16289910534536645 0.14970717285047677 368.8270005471922 2275587.6261283243 0.017872290002810095 0.04544403971468437 5.528039542428451e-07 6.25742885908591 0.14677897940193707 MHDGELEEQEEDDEKSDS(ph)EGGDLDK ddPTM_A549_MK2206_60min_R1 1 MHDGELEEQEEDDEKSDSEGGDLDK 25 1 Q9NU22 Q9NU22 MDN1 Midasin 1 MHDGELEEQEEDDEKS(0.366)DS(0.634)EGGDLDK 123.89 7.4778e-18 4975700.0 494.62 422.68 289.91 204.49 748.99 682.95 369.72 420.22 595.43 460.04 609.46 True False 578.0997637020296 444.19260658775 331.02359734399886 254.590059179905 638.8145631810536 755.2193156944803 436.89333826680377 479.78747186977716 460.5660557063253 356.116644488344 458.11426175970394 1.2619117367825192 0.9696109544407585 0.7225786773641892 0.5557348470269758 1.3944437370869998 1.6485391936796279 0.9536776623993617 1.0473096166594384 1.005351926694453 0.777353324737004 1.0 8.839563666513477 -5.253246638613131 22.51762246738152 1.0202234774007675 1.2619122137998906 0.05938426731088153 0.28707035447438445 639.1414085591889 1756491.2178452145 0.0382512724520072 0.5504428088360045 5.581531259836157e-06 5.253246638613131 0.24168873639912314 MHDGELEEQEEDDEKSDS(ph)EGGDLDK ddPTM_A549_PD325901_60min_R1 1 MHDGELEEQEEDDEKSDSEGGDLDK 25 1 Q9NU22 Q9NU22 MDN1 Midasin 1 MHDGELEEQEEDDEKS(0.447)DS(0.553)EGGDLDK 114.61 2.9001e-17 6017600.0 554.07 576.19 407.62 524.63 519.91 604.68 472.25 334.65 440.12 468.08 495.17 True False 610.3187785152242 624.7475534389812 435.2835444181839 557.0352035788214 483.39331519212965 599.755686561015 490.2217321751155 327.97514322215386 421.62328695852807 438.5253489169676 434.2672291412519 1.4053991127124834 1.438624679726346 1.0023402992644455 1.2827014478627339 1.113124092158699 1.3810751682714135 1.128848090021694 0.7552380682067885 0.9708844201582358 1.009805298419906 1.0 8.762439277405981 -8.003976076509396 23.598307918722174 0.967279037817872 1.2590212244929218 0.5663767941403509 0.1362372235364685 49.00759348437904 290868.3817693399 0.020661583351232443 0.028173580447611046 9.908865272386314e-09 8.003976076509396 0.2917421866750498 MHLPS(ph)PTDSNFYR ddPTM_A549_MK2206_60min_R1 5 MHLPSPTDSNFYR 13 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 MHLPS(0.991)PT(0.008)DS(0.001)NFYR;MHLPS(0.966)PT(0.032)DS(0.002)NFYR;MHLPS(0.981)PT(0.017)DS(0.001)NFYR;MHLPS(0.997)PT(0.003)DSNFYR;MHLPS(0.977)PT(0.02)DS(0.003)NFYR 88.507 5.8648999999999994e-05 23820800.0 4233.78 4633.19 4071.8199999999997 3500.37 6013.799999999999 4327.25 4344.16 4707.3099999999995 5931.02 6373.769999999999 5851.06 True False 4948.338558017019 4868.999581045467 4649.265303498472 4357.960807137583 5129.177986432687 4785.156722803924 5133.4376402821545 5374.58560803227 4587.65343989273 4933.930930224485 4398.080320959099 1.125113275998089 1.1070738198759575 1.0571124136460968 0.9908779488109106 1.1662310854100446 1.0880103075881102 1.1671996111164007 1.2220298893632353 1.043103605459459 1.1218373858957928 1.0 12.102658236647427 -8.97618482604201 19.382561324500884 1.0190151598565191 1.1128934206316565 0.08886239639406446 0.06567169198482664 11.47284679998229 9338.170176647174 0.01071126623846306 0.01108132807833159 1.0563678469501566e-09 8.97618482604201 0.09387826077513739 MHLPS(ph)PTDSNFYR ddPTM_A549_PD325901_60min_R1 6 MHLPSPTDSNFYR 13 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 MHLPS(0.996)PT(0.004)DSNFYR;MHLPS(0.995)PT(0.004)DS(0.001)NFYR;MHLPS(0.993)PT(0.006)DS(0.001)NFYR;MHLPS(0.994)PT(0.005)DSNFYR;MHLPS(0.997)PT(0.003)DSNFYR;MHLPS(0.998)PT(0.002)DSNFYR 90.70700000000001 5.6572e-05 42808900.0 6035.95 6042.47 5740.8099999999995 6060.82 6803.379999999999 7038.539999999999 6244.040000000001 6360.37 6480.6 7130.91 6961.82 True False 6648.715200568463 6551.6901529503075 6130.415888894937 6435.183086279081 6325.5340591868435 6981.2204638605 6481.66035906979 6233.507430736258 6208.242918893562 6680.663125631282 6105.5602746130635 1.0889607016433593 1.0730694413405848 1.0040709800843706 1.0539873159612543 1.0360284355046714 1.1434201203267838 1.0615996022544485 1.0209558419487232 1.0168178905230782 1.094193296790386 1.0 12.575907974357605 -8.343314061320138 3.497139752451363 1.0083951711599723 1.0652442046049297 0.025215745744421758 0.04152831656914368 0.19353094060334114 4.570585991639537 0.005538146154534333 0.006807332114286961 4.536134661131298e-09 8.343314061320138 0.0568490334449574 MHS(ph)QPR ddPTM_A549_MK2206_60min_R1 4 MHSQPR 6 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 MHS(1)QPR;MHS(1)QPR;MHS(1)QPR;MHS(1)QPR 53.891000000000005 0.020727000000000002 134088000.0 5849.120000000001 4799.68 2935.01 1866.9699999999998 4737.78 4131.82 3591.7000000000003 3941.58 4896.12 7132.31 6688.88 True False 6836.308458745732 5043.963210909183 3351.238551414612 2324.3777338114674 4040.858838099216 4569.04644991986 4244.265398282158 4500.311035582494 3787.1566374970253 5521.116217395574 5027.846492303425 1.3596891769091761 1.0032054913829267 0.6665355747325725 0.4623008553203843 0.8036957461380176 0.9087482000323813 0.8441517466333219 0.895077254739484 0.7532363295686065 1.098107554764697 1.0 12.295724887448873 -11.004576963136664 1.2743467718594657 1.0003358721909759 0.8337876217400808 0.09226164811803639 0.21310500646946182 1.079297996658514 3.1098517708974875 0.15575767323273082 0.035128435764924325 9.895164919853619e-12 11.004576963136664 -0.16654825045089505 MHS(ph)QPR ddPTM_A549_PD325901_60min_R1 5 MHSQPR 6 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 MHS(1)QPR;MHS(1)QPR;MHS(1)QPR;MHS(1)QPR;MHS(1)QPR 58.604 0.016818 137959000.0 8028.19 7933.130000000001 7377.27 5641.509999999999 6594.97 4553.82 4398.1 4372.05 6664.46 7927.650000000001 10184.79 True False 8843.205938758892 8601.682706422158 7877.935905328332 5989.97325990118 6131.762058611376 4516.73519973421 4565.4721022326685 4284.8460329431255 6384.3759224839405 7427.096826058785 8932.125396703223 0.9900449832492109 0.963005144284805 0.8819777550633152 0.6706100725043597 0.6864840993919052 0.505673062024107 0.5111294232297442 0.47971180907565725 0.7147655948538703 0.8315038690343587 1.0 13.124787789733356 -5.998868082204574 3.809684418744934 0.7608939036220481 0.972145778151852 0.26952381428438443 0.1611208678504277 0.3420487222560362 11.049543708100005 0.030213787770581275 0.09673327033097491 1.0026097364913607e-06 5.998868082204574 0.21125187452980387 MIEAVDNNLRPKS(ph)E ddPTM_A549_MK2206_60min_R1 1 MIEAVDNNLRPKSE 14 2 Q4KMQ2-3;Q4KMQ2;Q4KMQ2-2 Q4KMQ2-3 ANO6 Anoctamin-6 1 MIEAVDNNLRPKS(1)E 45.70399999999999 0.020843 7953000.0 2262.0 2907.3 2712.9 2248.7 3028.0 2649.7 3256.6 2616.0 3475.9 3950.0 3819.6 True False 2643.7702994096267 3055.2691519176824 3097.6300135715724 2799.6316009479788 2582.5852111673466 2930.0894952714907 3848.2820658868145 2986.8260111640025 2688.614199871715 3057.692256605857 2871.087904402854 0.9208252716175522 1.064150333827252 1.0789046231643806 0.97511176744352 0.8995145036161784 1.0205502558030901 1.3403567546592425 1.0403115859265968 0.9364444034432686 1.064994301260105 1.0 11.48738178703046 -8.702255120882322 8.981649749584625 0.970017148652525 1.046730388455128 0.006480358457927049 0.11360739282942818 0.6100558922605542 86.16674955959645 0.01928283154304837 0.02184565973554724 1.984928553260397e-09 8.702255120882322 0.07671323980260303 MIEAVDNNLRPKS(ph)E ddPTM_A549_PD325901_60min_R1 1 MIEAVDNNLRPKSE 14 2 Q4KMQ2-3;Q4KMQ2;Q4KMQ2-2 Q4KMQ2-3 ANO6 Anoctamin-6 1 MIEAVDNNLRPKS(1)E 41.513000000000005 0.045435 23517000.0 4138.7 4553.8 4236.8 3742.8 5082.8 4067.6 4105.2 4530.1 4774.1 4512.1 5570.3 True False 4558.857777250093 4937.564707562491 4524.334725948094 3973.984255484463 4725.801662708078 4034.474814208481 4261.425632451637 4439.743601705299 4573.461179379959 4227.205235960197 4885.188413041007 0.9331999898059664 1.010721448200783 0.9261331075522872 0.8134761486119788 0.9673734691772693 0.8258585899038107 0.8723155121460135 0.9088172709681793 0.9361893119968735 0.8653105834517406 1.0 12.25419849011429 -9.76325224338968 0.8681601126524855 0.9914407356864472 0.9075831103810796 0.0 0.066246397187058 0.5115218476406711 0.803513935027295 0.01997414925142267 0.011477049195937748 1.7248357959015905e-10 9.76325224338968 -0.08385762530536756 MIFEGPNKLS(ph)PR ddPTM_A549_MK2206_60min_R1 1 MIFEGPNKLSPR 12 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 MIFEGPNKLS(1)PR 44.457 0.016809 7624300.0 839.3 933.77 1175.9 813.66 1305.9 795.25 897.44 870.32 1553.2 1453.2 1144.8 True False 980.9533210851021 981.2949045458579 1342.660301875784 1013.0067365265851 1113.8038399152697 879.4028271557735 1060.4932313484803 993.690525243216 1201.4026799507324 1124.921110708767 860.5145651273401 1.1399613217934774 1.140358274354885 1.560299332849869 1.1772104477704906 1.2943462958705962 1.0219499620272414 1.232394283984661 1.154763167891491 1.3961445031124455 1.30726562489073 1.0 9.74905580140005 -11.054474139147473 1.3645568530241585 1.0001993037637573 1.2527558053646173 0.0 0.16469080725024726 0.43513056341797646 1.4469788641986034 0.10019371261794084 0.022364743701758536 8.821163277892644e-12 11.054474139147473 0.25255650160085996 MIFEGPNKLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 MIFEGPNKLSPR 12 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 MIFEGPNKLS(1)PR;MIFEGPNKLS(1)PR 66.24600000000001 0.0015144 28835000.0 3463.5 3858.2 3835.7 3236.6000000000004 4838.4 4258.799999999999 4528.9 4027.0 4303.6 3910.9 4258.2 True False 3815.1119703060613 4183.344054354079 4096.013667937852 3436.517431148073 4498.56747557385 4224.117744800637 4701.249767809174 3946.678325879613 4122.734658172138 3663.965106561629 3734.4683949538144 1.0215943922463546 1.120198007300532 1.0968130493412596 0.9202159632122348 1.204607188978362 1.1311162120178764 1.2588805877060625 1.056824669131635 1.103968282003127 0.9811209304951 1.0 11.866687173312785 -10.503304159331014 0.8350765213557115 1.000545652772577 1.1037716076886712 0.19885264587054408 0.08458968494370772 0.8766301384436033 1.104744269838 0.05445866186174393 0.01581183919912079 3.138310000023298e-11 10.503304159331014 0.10322595491609432 MIKPFFHSLSEK ddPTM_A549_MK2206_60min_R1 2 MIKPFFHSLSEK 12 1 P10599 P10599 TXN Thioredoxin 0 ; 80.69 0.00031224 8872000.0 1937.09 2533.5 2755.2 2212.11 3587.4 3020.6 2266.6000000000004 3123.5 4798.6 4042.7 3603.2 False True 2264.023434696461 2662.444328546571 3145.9287896319065 2754.077049305392 3059.6982122000436 3340.2378870879943 2678.4118806543806 3566.26569031757 3711.7247617895864 3129.4512622229113 2708.425996739023 0.8359185140824864 0.9830227341460263 1.1615339660081694 1.016855196568536 1.1296960728792134 1.2332764089215213 0.9889182439834872 1.316729973280199 1.3704361006202668 1.155450164040224 1.0 11.403238956753613 -4.358671260449398 0.6186974051316535 1.1772026323870382 2.3382582736971376e-17 0.42531652704025025 0.11599109351314392 7.892370587120792 0.9167803235142802 0.025583842229762403 8.573138577577812 4.378534132369588e-05 4.358671260449398 -1.1772026323870382 MIKPFFHSLSEK ddPTM_A549_PD325901_60min_R1 3 MIKPFFHSLSEK 12 1 P10599 P10599 TXN Thioredoxin 0 ;; 88.441 0.00014165 27611400.0 4309.82 4827.3099999999995 5277.52 5502.8 6622.299999999999 6635.7 6291.300000000001 6585.400000000001 6626.700000000001 5893.0 6446.499999999999 False True 4747.349753678207 5234.124355145915 5635.684243505846 5842.69545823445 6157.172493694757 6581.661059259322 6530.718864231457 6454.049030853645 6348.202843970003 5520.914974294328 5653.621367730439 0.839700688265928 0.9258002994365849 0.996827321276417 1.0334430055014299 1.0890670055901641 1.164149600966545 1.1551390585700145 1.141577868601506 1.12285602997825 0.9765271876547008 1.0 12.464959551419986 -5.718993268829323 1.1956030352425986 1.0821765762397562 0.8178728592959261 0.6652068644256052 0.05758596937178003 0.42050147593060366 0.8123304184477106 0.009845579955131146 0.11203740574141051 1.9098828597894016e-06 5.718993268829323 -0.26430371694383004 MIPLEKPGS(ph)GGSSPGATSGSGR ddPTM_A549_PD325901_60min_R1 1 MIPLEKPGSGGSSPGATSGSGR 22 1 Q9UEE5 Q9UEE5 STK17A Serine/threonine-protein kinase 17A 1 MIPLEKPGS(0.452)GGS(0.107)S(0.107)PGAT(0.107)S(0.107)GS(0.122)GR 40.104 0.021879 5165100.0 2531.0 2387.3 2449.8 2770.9 3043.0 3036.3 2156.9 2787.1 3224.5 2805.9 2527.0 True False 2787.9452567762787 2588.4861492300797 2616.0581598441363 2942.052199829513 2829.2701777800976 3011.5733794820567 2238.9820098009677 2731.509104062349 3088.985478500802 2628.7349951421097 2216.195019972827 1.257987330379644 1.1679866283887856 1.1804277765574132 1.3275240551102698 1.276634119417337 1.358893667904272 1.010282032773641 1.2325219935273746 1.393823851539327 1.1861478667045922 1.0 11.11386912542105 -11.030446828448646 1.3261868112785944 1.0001520368620553 1.2577105652837366 0.14303103532366201 0.11289709456106181 0.3328660330822465 1.0441794131419209 0.07637321951295557 0.017217149851974586 9.322946060678038e-12 11.030446828448646 0.25755852842168125 MIS(ph)TGSELNEDYPKENDSSSNNK ddPTM_A549_MK2206_60min_R1 1 MISTGSELNEDYPKENDSSSNNK 23 1 Q86T82;Q86T82-2;Q86W68 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 1 MIS(0.837)T(0.137)GS(0.026)ELNEDYPKENDSSSNNK 79.395 1.9714e-05 4965400.0 984.22 1586.1 1666.6 1490.2 2201.4 1509.1 1743.2 1695.3 2985.1 2811.4 2297.6 True False 1150.3322741312759 1666.8257152191488 1902.948940476384 1855.2990668976208 1877.5769761769475 1668.791960340493 2059.916875653715 1935.613966638505 2308.9796162251682 2176.3027873979013 1727.0425094659133 0.6660706194701689 0.9651329982228484 1.1018541408484899 1.074263694569609 1.087163150811839 0.9662715024059053 1.192742427799732 1.1207679926981602 1.3369558673684405 1.2601327271735316 1.0 10.754087878496435 -4.817714132929596 0.9342683872988867 1.14323157431448 8.774324050973734e-23 0.6474841705619638 0.10066423515296255 2.4904750355042364 0.9317023286123937 0.01972349976507126 3.514273072397152 1.521548734159082e-05 4.817714132929596 -1.14323157431448 MIS(ph)TPSPK ddPTM_A549_PD325901_60min_R1 1 MISTPSPK 8 0 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.517)T(0.348)PS(0.136)PK 56.258 0.0067983 46728000.0 4582.7 4337.6 3848.7 4249.7 5055.6 4812.5 4373.8 4725.5 4866.8 4693.2 4853.7 True False 5047.932330394565 4703.144774808527 4109.895926113206 4512.194317231037 4700.512096873172 4773.308595579291 4540.247352435196 4631.246195416966 4662.265320752895 4396.8705510534755 4256.725670139339 1.1858721283839102 1.1048738253913775 0.9655064114053357 1.0600152950620694 1.1042553505026096 1.1213568750891674 1.066605580031794 1.0879832421207842 1.0952703279561544 1.032923164839408 1.0 12.055528401541785 -10.730066264942064 0.8247695202054346 0.995950761918659 1.0854949855323186 0.21646937742242978 0.05095331570039999 0.759243304492983 0.8504413314098687 0.04400121241220308 0.009522495994819717 1.8618030398384762e-11 10.730066264942064 0.08954422361365955 MIS(ph)TPSPKK ddPTM_A549_MK2206_60min_R1 2 MISTPSPKK 9 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.524)T(0.442)PS(0.034)PKK;MIS(0.346)T(0.346)PS(0.308)PKK 48.74100000000001 0.0083891 82361900.0 4633.37 5468.13 5920.32 5011.13 7844.299999999999 5663.97 5176.83 5312.139999999999 7833.5 7717.0 8042.8 True False 5415.369580979482 5746.434460728387 6759.910399184655 6238.857074958178 6690.413861281371 6263.327545961 6117.393001027095 6065.152112746459 6059.224757529009 5973.724340310737 6045.550790012381 0.895761158755957 0.9505228986285001 1.118162866211039 1.0319749666589768 1.1066673812970595 1.0360226493024258 1.0118834848155442 1.0032422724438046 1.0022618232798934 0.9881191222774431 1.0 12.561658069268107 -5.531942853786384 24.998427703151158 1.0197266203185442 0.9094515572392317 0.49511235072368 0.04250972199062753 110.7411363514894 305420.53624118696 0.006100676404918705 0.023695380549159855 2.938036225143763e-06 5.531942853786384 -0.11027506307931256 MIST(ph)PSPK ddPTM_A549_PD325901_60min_R1 1 MISTPSPK 8 0 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.126)T(0.642)PS(0.232)PK 57.55 0.0077744 45163000.0 4272.7 3873.1 4381.9 4220.1 5078.8 4703.6 4437.7 4715.3 5494.1 5454.1 4977.9 True False 4706.461358604507 4199.499729645634 4679.2820845052765 4480.765992457512 4722.082608908828 4665.295441073612 4606.5791019026165 4621.24964241871 5263.2020832474045 5109.727195197473 4365.649857508004 1.0780666137277084 0.9619414902052609 1.0718409027828677 1.0263686137704178 1.0816448325070858 1.068637108642664 1.0551874869168136 1.05854793518796 1.2055941852954144 1.1704390782531062 1.0 12.09198070974715 -7.017732114603396 0.9446345310228376 1.0936424251245116 1.02721386878411 0.18197307727937362 0.05943665394356094 1.0259566835875964 1.7738371999330265 0.013148046948516526 0.036774332404346376 9.599926001250455e-08 7.017732114603396 -0.06642855634040168 MIST(ph)PSPKK ddPTM_A549_MK2206_60min_R1 2 MISTPSPKK 9 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.058)T(0.471)PS(0.471)PKK;MIS(0.083)T(0.757)PS(0.16)PKK 83.397 0.00088703 56083100.0 5222.76 5968.63 5989.63 5285.92 6874.950000000001 5874.51 4611.18 5034.77 8321.34 8455.699999999999 8789.0 True False 6104.234203777469 6272.40777292004 6839.049599391314 6580.970637293966 5863.653962191194 6496.146749015858 5448.971717919291 5748.464065836461 6436.569776449408 6545.551497261304 6606.448735940075 0.9239811656404018 0.9494371368988604 1.0352081538430558 0.9961434501856491 0.8875651952450694 0.9833038911928346 0.8247958828888001 0.870129217012455 0.9742858884885461 0.99078215224051 1.0 12.68965925112602 -8.977686756665877 19.36088658079733 0.988656236263827 0.9353924640196961 0.1594564789901538 0.05655919914165836 18.424983041460788 15988.492784706781 0.010523748086027853 0.010842041762053022 1.0527208954627013e-09 8.977686756665877 -0.053263772244130925 MIST(ph)PSPKK ddPTM_A549_PD325901_60min_R1 2 MISTPSPKK 9 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.09)T(0.608)PS(0.301)PKK;MIS(0.328)T(0.407)PS(0.265)PKK 69.01 0.0025953000000000005 230701000.0 10181.099999999999 10881.9 11887.7 11325.9 14189.2 13099.2 11975.1 12766.5 13454.1 12999.4 13460.8 True False 11214.677777070314 11798.955903031372 12694.470808547288 12025.475120014822 13192.59954208261 12992.524458225911 12430.818983526162 12511.862142374495 12888.67096489306 12178.615665508514 11805.206935041642 0.9499772294360679 0.9994704851812707 1.0753281055045316 1.018658561953654 1.1175237854512097 1.1005757484572278 1.052994585518658 1.059859620523489 1.091778486884067 1.0316308500580769 1.0 13.527135710530807 -5.525256307307921 3.2640609179228597 1.0545816121623077 0.9538596702934188 0.499288913340206 0.0342297521880929 0.1996952290033991 4.13108986338383 0.005833846825903113 0.036553020969122337 2.9836212572914298e-06 5.525256307307921 -0.10072194186888894 MISTPS(ph)PK ddPTM_A549_MK2206_60min_R1 4 MISTPSPK 8 0 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.023)T(0.054)PS(0.923)PK;MIS(0.001)T(0.053)PS(0.947)PK;MIS(0.139)T(0.165)PS(0.696)PK;MIS(0.032)T(0.197)PS(0.77)PK 92.051 0.0016016 107878000.0 17112.1 18856.2 17809.6 16733.4 25808.3 19705.1 16785.699999999997 19553.6 29357.3 26967.4 26721.199999999997 True False 20000.204129322494 19815.900038657936 20335.26908094817 20833.08375119087 22011.933258048288 21790.28060281324 19835.44441237986 22325.382680388535 22707.918423974774 20875.445610327293 20085.588572397526 0.9957489698264371 0.9865730330596233 1.0124308285839212 1.0372154978729666 1.0959068079437826 1.084871400420816 0.9875460876281502 1.1115124956342595 1.1305577798791002 1.0393245652265934 1.0 14.293873117160754 -6.2958894225561295 2.4244771857016048 1.0648331483683313 0.993228031197957 0.32524454993675267 0.041611878046103945 0.3397071892308985 3.877814948006048 0.007749649196111404 0.022629225758292734 5.059534684276539e-07 6.2958894225561295 -0.07160511717037432 MISTPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 MISTPSPK 8 0 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.156)T(0.156)PS(0.688)PK;MIS(0.014)T(0.21)PS(0.776)PK 121.73 0.0011743 36209000.0 10820.3 11138.9 12045.3 11551.7 14083.8 11402.099999999999 12124.3 11957.400000000001 13274.7 12388.3 13058.0 True False 11918.76889051614 12077.614194972952 12862.766492273071 12265.222273185813 13094.602474472338 11309.24507795421 12585.696871171524 11718.900276601174 12716.810523012753 11606.100623799497 11451.948781482062 1.0407633773029907 1.0546339688929274 1.1231945529718328 1.0710161656519825 1.1434387914523743 0.9875389153190586 1.0990004506065156 1.0233105736161496 1.1104494759508519 1.0134607519871814 1.0 13.483305502600901 -7.255601590113132 24.999059073757923 1.0508323212441844 1.0859991764482781 0.1915598067575165 0.045282735101416435 947.4261690400425 4057147.0140106496 0.007470998184506768 0.012743191442112594 5.551347448773485e-08 7.255601590113132 0.035166855204093794 MISTPS(ph)PKK ddPTM_A549_MK2206_60min_R1 1 MISTPSPKK 9 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.007)T(0.095)PS(0.898)PKK 79.741 0.00072305 47506000.0 5469.1 5452.4 6688.1 5481.1 8443.5 5573.1 5607.1 5538.6 7478.6 7638.2 8605.8 True False 6392.150373342703 5729.903870916643 7636.573148205996 6823.969746055931 7201.472335036816 6162.8417428756275 6625.837490522003 6323.713511251125 5784.709040870165 5912.72531503971 6468.742352002849 0.9881596801213713 0.8857832881754139 1.1805344428104427 1.0549144446822956 1.1132724018304887 0.9527109610367294 1.0242852675173426 0.9775800560820265 0.8942555949966234 0.9140455738214732 1.0 12.65926953646339 -7.964892465577725 1.5103915997056494 0.9508634120319933 1.0384276615428218 0.21139575813862221 0.07737267330732928 0.49173359159823166 2.2549132715060707 0.01397698026095848 0.02029974198228543 1.0841953353137003e-08 7.964892465577725 0.08756424951082853 MISTPS(ph)PKK ddPTM_A549_PD325901_60min_R1 3 MISTPSPKK 9 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.055)T(0.462)PS(0.483)PKK;MIS(0.003)T(0.132)PS(0.865)PKK;MIS(0.018)T(0.204)PS(0.778)PKK 71.555 0.0008075 146531200.0 5003.21 5361.15 5349.400000000001 5278.9 6496.0 6118.7 6332.4 6008.1 6156.400000000001 6014.1 6735.6 True False 5511.132196031469 5812.952925457563 5712.4424525554 5604.965663748243 6039.743369983411 6068.871335848518 6573.382947222241 5888.263732236727 5897.667917457694 5634.368699627272 5907.163900486335 0.9329573868058307 0.9840514032425923 0.9670363898460812 0.9488420768698814 1.0224438447502975 1.0273748008496717 1.1127815408475557 0.9968004665914126 0.9983924632550217 0.9538195984647381 1.0 12.528249926272009 -6.761909266059445 24.999999113879312 1.011273522480449 0.9606963933381407 0.3418564139478468 0.038122975248565456 12.208997056995639 649638.4570946343 0.005241734692254189 0.010350570576604063 1.7301777947338857e-07 6.761909266059445 -0.050577129142308275 MIYASSK ddPTM_A549_MK2206_60min_R1 2 MIYASSK 7 0 F6RFD5;P60981;P60981-2;Q9Y281;Q9Y281-3;P23528;E9PP50;G3V1A4;E9PK25;E9PQB7 F6RFD5;Q9Y281;P23528 DSTN;CFL2;CFL1 Destrin;Cofilin-2;Cofilin-1 0 ; 72.138 0.012129000000000001 18059400.0 8626.0 8706.7 8407.0 7946.3 12128.599999999999 9186.8 9065.8 8498.8 13198.7 13204.099999999999 12635.2 False True 10081.85791454795 9149.833840677493 9599.239015111585 9893.143856722962 10344.499006659265 10158.941078295698 10712.938510384036 9703.530926483414 10209.215523992869 10221.284639354284 9497.531126220278 1.0615240719469183 0.9633907716729793 1.0107088766058916 1.0416542704883058 1.089177689357682 1.069640198414242 1.1279708766427021 1.0216898262848988 1.0749336209920715 1.0762043844358569 1.0 13.213336819698744 -6.277919067932811 4.827863209119615 1.048466400177002 1.0066528017817182 0.18184429424105086 0.04030555049536789 0.29049311603238037 19.308702887324213 0.006323313228813245 0.01588538578512308 5.27328121429376e-07 6.277919067932811 -0.04181359839528387 MIYASSK ddPTM_A549_PD325901_60min_R1 2 MIYASSK 7 0 F6RFD5;P60981;P60981-2;Q9Y281;Q9Y281-3;P23528;E9PP50;G3V1A4;E9PK25;E9PQB7 F6RFD5;Q9Y281;P23528 DSTN;CFL2;CFL1 Destrin;Cofilin-2;Cofilin-1 0 ; 89.369 0.0076859 33805000.0 12955.7 12808.6 13591.3 13912.3 16029.199999999999 15429.3 13526.2 14461.400000000001 15608.3 15184.2 16004.5 False True 14270.953126517757 13888.025673785603 14513.687349126296 14771.63117387423 14903.364289738003 15303.648896368102 14040.946942820647 14172.956032251164 14952.337430325348 14225.467020648219 14036.04796088448 1.0167358480312911 0.9894541335629955 1.0340294782101698 1.052406718403903 1.0617920607902276 1.0903103878681635 1.000349028583389 1.0097540327411405 1.0652811583427453 1.0134951847052396 1.0 13.776849162069592 -5.7827604839115585 20.66414234120596 1.0355933433834066 1.0030951147168203 0.1690454574126884 0.0284189793007244 43.70301840170058 42358.070218120636 0.004502410262501648 0.014042657823375413 1.6490716139593185e-06 5.7827604839115585 -0.03249822866658625 MIYSSSNLKTPS(ph)K ddPTM_A549_PD325901_60min_R1 1 MIYSSSNLKTPSK 13 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 MIY(0.001)S(0.07)S(0.07)S(0.07)NLKT(0.347)PS(0.442)K 42.913000000000004 0.017779 15468000.0 5766.2 6841.1 6847.3 7567.6 9737.3 7844.1 7980.5 7525.0 7712.4 7731.6 7748.6 True False 6351.580379147913 7417.6235058425345 7311.99895415983 8035.033464733413 9053.385639861372 7780.220250303067 8284.20229459717 7374.907971751701 7388.274648593455 7243.425456516893 6795.571322422413 0.9346646628798488 1.0915378787016217 1.0759947335161404 1.1823926324224303 1.3322479023933071 1.1448956800190946 1.219058987323542 1.0852520887269228 1.087219057537573 1.0659038236589111 1.0 12.730379132104549 -9.470027484192808 0.8727331332805891 1.0160946129154997 1.1412057219457914 0.13477082767911375 0.09517204495241324 0.5765618676113833 0.9348368147759533 0.030325004717916968 0.02112951128505034 3.3882271316943676e-10 9.470027484192808 0.12511110903029166 MKDCEYQQISPGAAPLPAS(ph)PGAR ddPTM_A549_MK2206_60min_R1 5 MKDCEYQQISPGAAPLPASPGAR 23 1 Q9NUE0 Q9NUE0 ZDHHC18 Palmitoyltransferase ZDHHC18 1 MKDCEYQQISPGAAPLPAS(1)PGAR;MKDCEYQQIS(0.001)PGAAPLPAS(0.999)PGAR;MKDCEYQQISPGAAPLPAS(1)PGAR;MKDCEYQQISPGAAPLPAS(1)PGAR;MKDCEYQQISPGAAPLPAS(1)PGAR 124.32 2.4808e-16 48188300.0 6877.530000000001 8136.26 7496.299999999999 7778.799999999999 10315.3 8657.579999999998 7499.92 6532.51 10216.4 11149.8 12328.1 True False 8038.288924535237 8550.360881223729 8559.388061018311 9684.606349203597 8797.933034595286 9573.719369163506 8862.558383463065 7458.513297472839 7902.401712238384 8631.052436127591 9266.69253174909 0.8674388296573825 0.922698239088963 0.9236723924628506 1.045098487515656 0.9494145839469949 1.033132300047994 0.9563885229922758 0.804873289139447 0.8527747829296765 0.9314059365362886 1.0 13.177838788616004 -8.038702937988262 24.961263807770884 0.9172816187896985 0.9606154557052722 0.1331348768924644 0.06595074965174783 1265.2962943278385 816044.1115207594 0.012800408308786688 0.01652695550108655 9.147387184724315e-09 8.038702937988262 0.04333383691557369 MKDCEYQQISPGAAPLPAS(ph)PGAR ddPTM_A549_PD325901_60min_R1 5 MKDCEYQQISPGAAPLPASPGAR 23 1 Q9NUE0 Q9NUE0 ZDHHC18 Palmitoyltransferase ZDHHC18 1 MKDCEYQQISPGAAPLPAS(1)PGAR;MKDCEYQQISPGAAPLPAS(1)PGAR;MKDCEYQQISPGAAPLPAS(1)PGAR;MKDCEYQQISPGAAPLPAS(1)PGAR;MKDCEYQQISPGAAPLPAS(1)PGAR 137.5 4.7035e-23 62707300.0 8703.2 7722.5 8736.9 9170.0 9660.0 9543.5 9088.300000000001 10542.5 8611.4 9527.4 11133.300000000001 True False 9586.742457042796 8373.30217711611 9329.838573247707 9736.410073418976 8981.514925190846 9465.780900137343 9434.160229808582 10332.221567068746 8249.492804950167 8925.838338043739 9763.974679803512 0.9818483528918488 0.8575710662621886 0.9555369487536871 0.9971769072239042 0.9198625784813678 0.9694597958879416 0.9662212919624688 1.0581983163517041 0.844890843686229 0.9141603323190265 1.0 13.2532528385512 -4.915986874604351 20.49180283648255 0.9406968336285852 3.150822121295072 0.011118266734283178 0.05987823356352638 1997.0088377612904 485854.58343476034 0.0092838885411906 520.552030082645 1.2134255224699606e-05 4.915986874604351 2.2101252876664867 MKDNEEREQSSDLTPSGDVS(ph)PVKPLSR ddPTM_A549_MK2206_60min_R1 5 MKDNEEREQSSDLTPSGDVSPVKPLSR 27 3 Q8WYQ5;Q8WYQ5-3 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 1 MKDNEEREQSSDLT(0.001)PS(0.011)GDVS(0.977)PVKPLS(0.011)R;MKDNEEREQSSDLT(0.001)PS(0.033)GDVS(0.938)PVKPLS(0.028)R;MKDNEEREQSSDLTPSGDVS(0.991)PVKPLS(0.009)R;MKDNEEREQSSDLT(0.001)PS(0.014)GDVS(0.985)PVKPLS(0.001)R;MKDNEEREQSSDLTPS(0.005)GDVS(0.995)PVKPLSR 114.08 5.0473e-18 70016000.0 4966.66 6234.53 5887.26 6118.7300000000005 7940.4 6160.0599999999995 6153.58 5494.93 9151.1 9338.6 10887.5 True False 5804.91078482132 6551.84094716931 6722.161994065163 7617.819124680225 6772.377678584272 6811.913460483108 7271.6058327703 6273.853155017362 7078.390461303854 7229.0037740606185 8183.833270286443 0.709314399878792 0.8005833856558993 0.8213952767673968 0.930837527242731 0.8275312381024634 0.83236219941278 0.8885329884678584 0.76661546585953 0.8649235911249329 0.8833273522699218 1.0 12.998561037934335 -14.999999999999972 0.1467214553935437 1.6342909220993418 0.7727303006535101 0.27162413636665206 0.06439269152932338 31.506676168321025 0.3063839705223643 5.740750947151267 0.11171204589841838 1.0000000000000654e-15 14.999999999999972 -0.8615606214458317 MKDNEEREQSSDLTPSGDVS(ph)PVKPLSR ddPTM_A549_PD325901_60min_R1 5 MKDNEEREQSSDLTPSGDVSPVKPLSR 27 3 Q8WYQ5;Q8WYQ5-3 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 1 MKDNEEREQSSDLT(0.001)PS(0.025)GDVS(0.973)PVKPLSR;MKDNEEREQSSDLTPS(0.001)GDVS(0.986)PVKPLS(0.013)R;MKDNEEREQS(0.002)S(0.002)DLT(0.012)PS(0.135)GDVS(0.848)PVKPLS(0.002)R;MKDNEEREQSSDLT(0.001)PS(0.007)GDVS(0.974)PVKPLS(0.018)R;MKDNEEREQSSDLT(0.002)PS(0.009)GDVS(0.94)PVKPLS(0.048)R 75.068 1.2877000000000002e-06 86516000.0 9809.1 9993.2 9836.800000000001 11655.5 13130.900000000001 11831.7 12096.699999999999 13913.4 12409.3 12289.3 13879.8 True False 10804.912610922245 10835.362035138456 10504.384401483721 12375.433763438914 12208.630883145812 11735.346557987634 12557.046538068236 13635.886322148846 11887.780275503173 11513.351500694944 12172.672591301474 0.8876368381618492 0.8901382957495585 0.8629480767428261 1.016657079258201 1.0029540178276077 0.9640731293778203 1.0315767916933405 1.1202048046451998 0.976595746442578 0.9458359628371441 1.0 13.571358335679145 -6.262442646560656 24.99447694272271 1.0018558875727828 0.8812307883573525 0.6272460884400066 0.04345531491593619 44.51920196176334 1109127.9091359081 0.005954591988043184 0.014619435946275091 5.464587110960865e-07 6.262442646560656 -0.1206250992154303 MKEIAEAYLGK ddPTM_A549_MK2206_60min_R1 2 MKEIAEAYLGK 11 1 P11142;E9PKE3;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 96.64 0.00028435 7964200.0 1718.7199999999998 2023.65 1817.97 1731.32 2709.0 1843.3200000000002 1513.51 1855.4499999999998 2767.6000000000004 2326.8 2680.9 False True 2008.7979173303777 2126.645141291995 2075.7854826100165 2155.4934777219073 2310.509688590599 2038.3788989032137 1788.4951758092345 2118.46571957731 2140.743018949039 1801.1742639672184 2015.1585409240804 0.9968436113265877 1.0553239847405707 1.030085445117452 1.0696396506517418 1.1465647201788307 1.0115228442366055 0.8875208275122085 1.0512650377403343 1.0623198996379561 0.8938126839098544 1.0 10.976677630714233 MKEIAEAYLGK ddPTM_A549_PD325901_60min_R1 3 MKEIAEAYLGK 11 1 P11142;E9PKE3;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;; 111.79 5.9298999999999996e-05 20572900.0 5709.6 5445.0 5982.0 5305.1 6754.799999999999 6827.4 6308.1 7154.8 6700.0 6595.2 6552.1 False True 6289.234388814631 5903.869259229159 6387.9744926882295 5632.783978243725 6280.366150794944 6771.799918017253 6548.158197424769 7012.091901167982 6418.422299877618 6178.777946456127 5746.2332371839975 1.0944968867808673 1.0274329313723458 1.1116803354502756 0.9802567605146725 1.0929535735087397 1.1784763406742336 1.1395566325173678 1.2202936448511323 1.1169790774143782 1.0752744783266235 1.0 12.488400837104333 -4.879919263396365 18.971453467296133 1.0788291104861092 4.069875664595326 0.0 0.07067755206616315 3745.723471891833 588417.5088081298 0.010875330066002645 2770.2290698378815 1.3185018290878482e-05 4.879919263396365 2.991046554109217 MKESS(ph)PLSSR ddPTM_A549_MK2206_60min_R1 2 MKESSPLSSR 10 1 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 MKES(0.065)S(0.928)PLS(0.006)S(0.001)R;MKES(0.057)S(0.938)PLS(0.004)SR 80.905 0.00032232 26205000.0 6446.1 6897.3 7975.4 6715.8 9208.2 6645.6 6325.3 5887.5 10048.8 10546.3 11001.4 True False 7534.0440879860325 7248.3431092497585 9106.43164519102 8361.171301483722 7853.685978028777 7348.832981007743 7474.52513399062 6722.071154712558 7772.762844636178 8163.883505276544 8269.448756806363 0.9110696866928356 0.8765207116476585 1.1012138672116154 1.0110917362662009 0.9497230358389508 0.8886726548682117 0.903872235478639 0.8128801994425324 0.9399372404646227 0.9872343061025766 1.0 13.01357544690896 -4.372438887487841 16.03224718589085 0.9533526200117024 0.9521398737300726 0.0 0.07553996103756254 0.0 0.0 0.01025928834738019 0.0 4.241906704474938e-05 4.372438887487841 -0.0012127462816298173 MKESS(ph)PLSSR ddPTM_A549_PD325901_60min_R1 1 MKESSPLSSR 10 1 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 MKES(0.281)S(0.715)PLS(0.004)SR 64.22399999999999 0.0017165 17172000.0 5363.0 5506.5 5438.9 4845.5 5589.0 5901.7 5246.2 5666.8 5463.1 5456.7 6010.8 True False 5907.44781196807 5970.552080063429 5808.016460762626 5144.79553007106 5196.447921003278 5853.638511902395 5445.847011830791 5553.771228481403 5233.504905442003 5112.163030753753 5271.509705600578 1.1206368084064904 1.132607623527691 1.101774782770873 0.9759624504921439 0.9857608562272867 1.1104292392145934 1.0330716086977878 1.0535447222227332 0.9927905282772794 0.9697720987447807 1.0 12.36400047856797 -2.0000000001823426 0.28010494014310605 0.9965594153587766 2.119377691286537 0.4786678437555544 0.04341466676532331 27.881756740709076 0.34671736971941064 0.016409219071874318 15.584941304147232 0.009999999995801407 2.0000000001823426 1.1228182759277603 MKETIQGTGSWGPEPPGPGIPPAYS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 MKETIQGTGSWGPEPPGPGIPPAYSSPR 28 1 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 MKETIQGTGSWGPEPPGPGIPPAYS(0.5)S(0.5)PR 77.925 1.7080000000000002e-06 2585900.0 881.87 745.02 1352.1 1062.8 1400.9 1090.6 1170.6 1162.6 1768.7 1330.1 1860.0 True False 1030.7080963485273 782.9383357622917 1543.8481113753262 1323.1860477109055 1194.829465761009 1206.0065681183105 1383.282867508168 1327.4021103131765 1368.092274033518 1029.6294862054299 1398.1106666115072 0.7372149579879644 0.5599973982459048 1.1042388476421767 0.9464100942150805 0.8546029254299482 0.8625973586491658 0.9893944024193191 0.9494256370493893 0.9785293158153621 0.7364434810449328 1.0 10.44926284555614 -5.756756281124434 24.999999769683548 0.9722661006639544 0.6486061130239548 0.5125199168783465 0.1030869665809375 40.677214159587805 217140.84357161843 0.010056342060548888 0.03653845586493588 1.750828949214344e-06 5.756756281124434 -0.3236599876399996 MKETIQGTGSWGPEPPGPGIPPAYS(ph)SPR ddPTM_A549_PD325901_60min_R1 3 MKETIQGTGSWGPEPPGPGIPPAYSSPR 28 1 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 MKETIQGTGSWGPEPPGPGIPPAYS(0.5)S(0.5)PR;MKETIQGTGSWGPEPPGPGIPPAYS(0.5)S(0.5)PR;MKETIQGTGSWGPEPPGPGIPPAYS(0.5)S(0.5)PR 132.0 1.0879000000000001e-27 13270000.0 2873.77 2391.16 2731.4700000000003 2400.9900000000002 3012.46 3192.2200000000003 2866.4500000000003 2561.84 3684.4600000000005 2927.73 3685.84 True False 3165.513014842339 2592.6714449767496 2916.843979863443 2549.293699256076 2800.875202022816 3166.223618697167 2975.5343233316275 2510.742091475398 3529.614959254787 2742.8726281504714 3232.5050464648352 0.9792755059436765 0.8020626132702169 0.9023478503315536 0.7886433780030939 0.8664720276572925 0.9794953366460616 0.9205041540726321 0.7767171451816358 1.0919132092662562 0.8485284906670632 1.0 11.658436906980404 -8.772580081485232 24.999946298672 1.0434034665843441 0.8768693090876193 0.11175742464479255 0.09010300529824777 117.0826835051453 262734.93069131236 0.012105952615341328 0.012945726707599957 1.6881845389519967e-09 8.772580081485232 -0.16653415749672484 MKETIQGTGSWGPEPPGPGIPPAYS(ph)SPRR ddPTM_A549_PD325901_60min_R1 1 MKETIQGTGSWGPEPPGPGIPPAYSSPRR 29 2 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 MKETIQGTGSWGPEPPGPGIPPAY(0.012)S(0.494)S(0.494)PRR 46.898 0.004671 8258500.0 2089.7 2265.3 1831.8 2000.4 2805.3 1962.9 2121.6 2554.8 2744.4 2121.2 2329.6 True False 2301.8448056441675 2456.204781071043 1956.116963508241 2123.9601647619743 2608.265405759616 1946.914793197421 2202.3386489840677 2503.8425097981712 2629.0624119080785 1987.2670699937435 2043.0739685511269 1.1266575958953418 1.2022104039693156 0.9574381513438045 1.0395904394338737 1.2766377751899518 0.952934070506562 1.0779534578211505 1.2255270970799967 1.2868170474378435 0.9726848369582235 1.0 10.99652572178761 MKMHS(ph)T(ph)ESLLK ddPTM_A549_MK2206_60min_R1 1 MKMHSTESLLK 11 1 A0A590UJM5;F8WES4;C9J7D9 A0A590UJM5 DOCK4 2 MKMHS(0.993)T(0.994)ES(0.012)LLK 60.434 0.0019862 12985000.0 2242.3 2001.2 3484.4 2376.6 2756.7 2471.6 2548.8 2465.6 3287.3 3607.2 3909.6 True False 2620.745421028385 2103.0525321836967 3978.5403145301316 2958.8671066896277 2351.193081778409 2733.1430714847015 3011.8839677984115 2815.106350583318 2542.731798739402 2792.331014690797 2938.738420529219 0.8917926831189117 0.7156310740324315 1.3538259433834403 1.0068494310414955 0.8000688544967528 0.930039588549874 1.024890118412111 0.9579302230228314 0.8652460460504332 0.9501801845255569 1.0 11.520981233920057 MKQPPAT(ph)TPPFK ddPTM_A549_MK2206_60min_R1 3 MKQPPATTPPFK 12 1 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4;Q63HN8-5 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 MKQPPAT(0.5)T(0.5)PPFK;MKQPPAT(0.5)T(0.5)PPFK;MKQPPAT(0.635)T(0.365)PPFK 70.332 0.0012359000000000003 46545000.0 7452.900000000001 9288.4 9607.8 9131.9 12212.699999999999 9391.3 9170.0 9005.1 14219.2 12420.099999999999 13914.999999999998 True False 8710.767314089313 9761.139886035908 10970.330511405855 11369.21590994657 10416.228008065858 10385.081132559591 10836.0703015974 10281.600501962135 10998.57390339651 9614.390783865923 10459.521465537162 0.83280744179265 0.933230063937214 1.0488367510456138 1.0869728550590712 0.9958608567692174 0.9928830077721201 1.0360005796919982 0.9829895694405089 1.0515370076571342 0.9191998711933581 1.0 13.352529227779716 -5.485850217586979 2.969468302918178 1.0240853805586543 0.8349617881485075 0.59599583350958 0.043658230935793865 0.09772490497528454 1.5408079341418517 0.004441396012178787 0.033545565159264615 3.2670048741435906e-06 5.485850217586979 -0.18912359241014676 MKQPPATT(ph)PPFK ddPTM_A549_MK2206_60min_R1 1 MKQPPATTPPFK 12 1 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4;Q63HN8-5 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 MKQPPAT(0.13)T(0.87)PPFK 55.213 0.007505400000000001 7730100.0 1926.2 2422.7 2624.4 2531.9 3350.9 2628.3 2377.8 2622.8 3436.6 3765.4 3557.2 True False 2251.2954689313997 2546.0050818116356 2996.5793828070455 3152.2156136613107 2857.9870489103896 2906.4249614756623 2809.815481258263 2994.589931988129 2658.2155871225114 2914.793524816127 2673.849066274437 0.8419680442427533 0.95218728458711 1.120698778627127 1.178905590977653 1.0688662591163076 1.086981684244908 1.0508504450377494 1.1199547385674207 0.9941531931068539 1.0901114657445514 1.0 11.384702314983748 -8.849516829089534 24.99994180919399 0.9972384952969601 1.0573307166898047 0.0 0.0903783923796595 40.50890194967358 11489.05108231173 0.015448580793282497 0.01644621651173924 1.414109926668011e-09 8.849516829089534 0.06009222139284465 MKQPPATT(ph)PPFK ddPTM_A549_PD325901_60min_R1 4 MKQPPATTPPFK 12 1 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4;Q63HN8-5 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 MKQPPAT(0.197)T(0.803)PPFK;MKQPPAT(0.076)T(0.924)PPFK;MKQPPAT(0.01)T(0.99)PPFK;MKQPPAT(0.015)T(0.985)PPFK 86.291 0.00012832 81650000.0 13383.1 15024.699999999997 15664.1 15648.199999999999 18605.699999999997 17915.8 16205.8 17697.6 19281.899999999998 17964.7 17961.3 True False 14741.7424598825 16290.88419818924 16727.160021885265 16614.753774359287 17298.89981818046 17769.89966476457 16822.520587154024 17344.607484501386 18471.548797613457 16830.405776125124 15752.173966061693 0.9358544726362098 1.0341991037737526 1.0618953331726906 1.054759413535937 1.098191262707688 1.1280918877007133 1.0679491366333567 1.1010929362429984 1.172634890740205 1.0684497144576044 1.0 13.943263329026781 -4.4895390853704304 0.8927162242927971 1.0871929172949275 0.5039732506942496 0.5386250347005475 0.04093527603039905 6.28440122260806 1.3814864961955389 0.009345361452911214 4.986529440332438 3.23937267613903e-05 4.4895390853704304 -0.5832196666006779 MKRPS(ph)PPPQPSSVK ddPTM_A549_PD325901_60min_R1 3 MKRPSPPPQPSSVK 14 2 H3BLZ3;Q8IX03-2;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 MKRPS(1)PPPQPSSVK;MKRPS(0.999)PPPQPS(0.001)SVK;MKRPS(1)PPPQPSSVK 60.317 0.0014517000000000002 14414200.0 4101.3 5080.0 5072.2 4472.5 5415.6 5798.700000000001 4812.2 5577.5 5395.9 5357.6 5479.1 True False 4517.660956782514 5508.109428261553 5416.4299936163925 4748.756167215521 5035.226938805752 5751.4773097528605 4995.33090433688 5466.252387035894 5169.129087747707 5019.320221666265 4805.205434876577 0.9401597950408028 1.1462796966563056 1.1272005051653977 0.9882524756899377 1.0478692341142504 1.1969264140109732 1.0395665642264442 1.1375689262651256 1.0757352953590167 1.0445589246269524 1.0 12.230382395898797 -10.372112704899445 0.886261335368937 1.0029890815220934 1.080998150037326 0.07001198517807616 0.0713665296831509 0.7842418996328865 1.1716119521521393 0.03568678660609415 0.012592884599377544 4.2450938410733617e-11 10.372112704899445 0.0780090685152326 MKS(ph)LEQDALR ddPTM_A549_MK2206_60min_R1 3 MKSLEQDALR 10 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 MKS(1)LEQDALR;MKS(1)LEQDALR;MKS(1)LEQDALR 54.09 0.0045222000000000005 41764100.0 7793.5 10085.7 9276.8 9134.7 12761.4 9082.9 7660.3 9045.1 13477.599999999999 12402.2 12906.6 True False 9108.852267218806 10599.019050492261 10592.389734196156 11372.701910072265 10884.21496492436 10044.04644925894 9052.077353470724 10327.270624457005 10424.945119304652 9600.53440629802 9701.535015961326 0.9389083533927964 1.0925094877309993 1.0918261611970852 1.172257987149608 1.1219064763480464 1.035304870078199 0.9330561955997592 1.0644986187717917 1.0745665610806068 0.989589213511353 1.0 13.243997319045105 -7.353191965462701 7.803300436875891 1.029842609506578 1.0892923016096874 0.19525655372075235 0.06443705555558611 0.42951131040486146 32.71307636858857 0.009871373586589958 0.015801996158236475 4.4341260478201017e-08 7.353191965462701 0.05944969210310935 MKS(ph)LEQDALR ddPTM_A549_PD325901_60min_R1 2 MKSLEQDALR 10 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 MKS(1)LEQDALR;MKS(1)LEQDALR 98.58200000000001 0.00011181 48047000.0 6608.4 7095.2 6677.9 6627.6 7918.8 7585.3 6583.9 8147.3 7922.2 8406.2 9743.8 True False 7279.279903153041 7693.137404606567 7131.102451474875 7036.971799628305 7362.610806376943 7523.527831698201 6834.45391734832 7984.795710066797 7589.25748419261 7875.431097388938 8545.374371037286 0.8518386190106076 0.9002692065406528 0.8344985417659662 0.8234831493724386 0.8615901991761689 0.8804210915788062 0.7997840259067217 0.9343997539920018 0.888112931589606 0.921601647328761 1.0 13.060927982111526 -10.293246940970596 0.4117622787805813 1.0249164514845353 0.8506898601698122 0.4608253721162172 0.03983560347626084 0.648478833897836 0.1769273465860617 0.04727570912191897 0.010397598851357152 5.090413465208039e-11 10.293246940970596 -0.17422659131472307 MKS(ph)PEK ddPTM_A549_PD325901_60min_R1 1 MKSPEK 6 1 Q5T171 Q5T171 PYGO2 1 MKS(1)PEK 40.045 0.036949 5247800.0 2615.8 2616.7 2037.7 2274.2 2338.9 2259.4 1696.6 1844.2 2281.8 3158.2 3180.6 True False 2881.3540903498183 2837.218492309449 2175.9905756855237 2414.672168917058 2174.6237327669646 2241.000195501682 1761.165041415143 1807.4159842530883 2185.903881173245 2958.7907130182175 2789.406363484594 1.0329631881782764 1.017140610794738 0.7800909197637391 0.8656580842887988 0.7796009076463036 0.8033968176304618 0.6313762901204014 0.6479572169596761 0.7836448320289056 1.0607241568496404 1.0 11.445742407582841 -5.747411702908733 23.431236932130222 0.8392972894587399 1.025052287714936 0.28444240244705754 0.12320439599109852 128.76647133393047 215076.96350307344 0.018554583844429498 0.07099331659264137 1.7889091980681483e-06 5.747411702908733 0.185754998256196 MKS(ph)SSSVTTSETQPCTPSSSDYSDLQR ddPTM_A549_MK2206_60min_R1 1 MKSSSSVTTSETQPCTPSSSDYSDLQR 27 1 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 MKS(0.125)S(0.125)S(0.125)S(0.125)VT(0.125)T(0.125)S(0.125)ET(0.119)QPCT(0.002)PSSSDYSDLQR 55.31399999999999 0.0011005000000000001 7383700.0 737.22 734.13 869.18 318.3 835.18 797.16 674.91 757.71 1372.7 791.82 988.54 True False 861.6447127014881 771.4940812772422 992.4427937617083 396.2835142890298 712.3261283562563 881.5149420880177 797.5324108234562 865.1177128895553 1061.7856417514608 612.9473120571264 743.0582356839452 1.159592440165057 1.0382686635148097 1.3356191292977435 0.5333142077676754 0.9586410514656342 1.186333586998912 1.0733107750153263 1.1642663674849938 1.4289400086847084 0.8248980801524141 1.0 9.537331473270816 -7.2718840796829864 20.36581941743963 1.1922965181921772 0.9990838126089873 0.0 0.23395221316055714 92.0133495650862 179415.41135058663 0.03493858118695841 0.056391662855187236 5.3470706243214825e-08 7.2718840796829864 -0.19321270558318993 MKS(ph)SSSVTTSETQPCTPSSSDYSDLQR ddPTM_A549_PD325901_60min_R1 2 MKSSSSVTTSETQPCTPSSSDYSDLQR 27 1 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 MKS(0.379)S(0.137)S(0.137)S(0.137)VT(0.184)T(0.019)S(0.007)ET(0.001)QPCTPSSSDYSDLQR;MKS(0.539)S(0.148)S(0.148)S(0.148)VT(0.012)T(0.004)SETQPCTPSSSDYSDLQR 92.956 1.717e-09 20085700.0 1282.53 1754.5 1179.18 959.1800000000001 1459.96 1338.37 1507.6399999999999 1330.88 1856.55 1484.4 1550.43 True False 1412.7315014513151 1902.3578724182864 1259.2062457853744 1018.4263701441665 1357.4174461885752 1327.4707584551593 1565.0140652122627 1304.3345543448381 1778.5256598265355 1390.6747306707105 1359.736938985543 1.0389741287055934 1.399063170143466 0.9260660718129998 0.7489877938478177 0.9982941606347047 0.976270277282857 1.1509682647732367 0.9592550712919229 1.3079924570950008 1.0227527772454643 1.0 10.409111852659626 -8.723146988456067 24.999701117417356 1.1454412073126985 1.0264429008501181 0.03767518101400935 0.1684201515631196 331.02223393872083 216112.12170870145 0.03166271900511402 0.03590176611162922 1.891703256833141e-09 8.723146988456067 -0.11899830646258036 MKSSSSVT(ph)TSETQPCTPSSSDYSDLQR ddPTM_A549_PD325901_60min_R1 1 MKSSSSVTTSETQPCTPSSSDYSDLQR 27 1 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 MKS(0.114)S(0.148)S(0.148)S(0.148)VT(0.192)T(0.192)S(0.043)ET(0.017)QPCTPSSSDYSDLQR 98.94 3.1012e-10 12134000.0 539.7 688.59 386.83 678.98 725.63 434.31 691.67 1076.2 575.89 695.69 867.87 True False 594.4899466938595 746.619895906815 413.082609997758 720.9190525245381 674.6642520876017 430.77312335502165 717.991880346347 1054.7343467374326 551.687346011421 651.7640146728022 761.1274918812098 0.7810648715690357 0.9809393352241979 0.5427245952932 0.9471725305082698 0.8864011079406621 0.5659671053141423 0.9433266936288841 1.385752528962712 0.7248290882883043 0.8563138523112549 1.0 9.571994320900723 MKT(ph)PADTGFAFPDWAYKPESSPGSR ddPTM_A549_MK2206_60min_R1 1 MKTPADTGFAFPDWAYKPESSPGSR 25 2 P50548 P50548 ERF ETS domain-containing transcription factor ERF 1 MKT(0.993)PADT(0.007)GFAFPDWAYKPESSPGSR 73.492 2.5391e-06 2537300.0 1207.7 1385.7 1043.2 1475.3 1994.2 1433.7 1617.3 1719.0 2267.4 1736.7 2129.9 True False 1411.5302345698528 1456.2262111967575 1191.1414464808379 1836.7485662287336 1700.855821700765 1585.4131823869623 1911.142475329713 1962.6735142167129 1753.8375202937739 1344.3782638094658 1600.987047750455 0.881662494742348 0.9095802575310644 0.7440044241173027 1.147260103577694 1.0623795015022985 0.9902723351913586 1.1937276307232199 1.2259146736848765 1.0954726478006733 0.8397183885394014 1.0 10.644745920922395 -6.266608997687354 24.975977249329226 1.0723118675179384 0.8515321768806741 0.4640876270193902 0.1072324559772547 235.72319321120796 1138851.6920000003 0.01259672405602615 0.03012641157384966 5.412413919918914e-07 6.266608997687354 -0.22077969063726433 MKT(ph)PVQYS(ph)QQQNSPQK ddPTM_A549_PD325901_60min_R1 2 MKTPVQYSQQQNSPQK 16 1 P46013 P46013 MKI67 Antigen KI-67 2 MKT(0.997)PVQY(0.004)S(0.695)QQQNS(0.304)PQK;MKT(0.993)PVQY(0.257)S(0.532)QQQNS(0.218)PQK 56.93600000000001 0.0046733 13837100.0 2288.46 1948.6100000000001 2589.9 2208.0 2733.1000000000004 2281.88 1776.55 3108.0 2835.6000000000004 2658.3 2915.4 True False 2520.7827745247905 2112.82620334739 2765.666188333877 2344.383145268165 2541.136484683138 2263.297125834902 1844.1575824154627 3046.008501821169 2716.4295930646217 2490.454484331684 2556.824282243284 0.9859037995028459 0.8263478323561826 1.0816801950532795 0.9169121091150116 0.9938643427047 0.8851985416256882 0.721268800215497 1.1913249271665587 1.0624232615161588 0.9740420965286793 1.0 11.320137299427355 -8.276779291331831 24.999236768757413 1.0424398291634605 0.9206742136384891 0.3024454485648016 0.10203066029652805 839.044413104662 1367375.9061769648 0.016089927000363394 0.01948875002145703 5.287138761623999e-09 8.276779291331831 -0.12176561552497134 MKT(ph)PVQYSQQQNS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 MKTPVQYSQQQNSPQK 16 1 P46013 P46013 MKI67 Antigen KI-67 2 MKT(0.998)PVQYS(0.002)QQQNS(1)PQK;MKT(0.879)PVQYS(0.121)QQQNS(1)PQK 91.729 4.9555e-06 4744500.0 1962.0 2360.3 1724.34 2043.52 2542.7 2435.2 1997.78 2440.1000000000004 2696.8 2583.3 2453.8999999999996 True False 2161.180795651939 2559.2107644735715 1841.3640816987663 2169.7435892293483 2364.109523838795 2415.368538587988 2073.8066111271623 2391.4302912785824 2583.462874374621 2420.1899971312646 2152.0858565537455 1.0042261042097818 1.1891768893327415 0.8556183184287288 1.008204938767582 1.098520078387846 1.122338372901094 0.9636263371239584 1.1112150958085438 1.2004460075359928 1.1245787382325207 1.0 11.071519919412347 -6.760962582904244 24.991402087525703 1.0902366866273363 1.015462416742826 0.12895185867572267 0.09290431031347597 23.731139188026578 1243743.8508394575 0.014943071010853848 0.0296599494608706 1.7339533818877832e-07 6.760962582904244 -0.07477426988451041 MKTPVQYSQQQNS(ph)PQK ddPTM_A549_MK2206_60min_R1 2 MKTPVQYSQQQNSPQK 16 1 P46013 P46013 MKI67 Antigen KI-67 1 MKT(0.003)PVQY(0.002)S(0.014)QQQNS(0.981)PQK;MKTPVQY(0.002)S(0.002)QQQNS(0.995)PQK 44.382 0.012275 20772000.0 1257.92 1550.2199999999998 1168.65 835.15 1481.0300000000002 1487.9 1368.26 1123.21 1701.29 1990.9499999999998 2188.6000000000004 True False 1470.226142808736 1629.1195764750205 1334.3821428583512 1039.7617874913083 1263.1724489085773 1645.3485904119138 1616.8551309556876 1282.42845718636 1315.9505314018675 1541.193012225172 1645.1102177128735 0.8936946150955944 0.9902798967110641 0.8111202085374473 0.6320316877837187 0.7678345409979351 1.0001448977074447 0.9828248062330635 0.7795395368519841 0.7999163321904215 0.9368326788267274 1.0 10.68396852833144 -7.241112026817691 24.376058563881926 0.9051747161005057 0.8176841518447501 0.16820111849142205 0.10637338207922813 1133.2397595846596 1358952.6218413697 0.018392581087834144 0.03182991300332523 5.7396838722967035e-08 7.241112026817691 -0.08749056425575563 MKTPVQYSQQQNS(ph)PQK ddPTM_A549_PD325901_60min_R1 5 MKTPVQYSQQQNSPQK 16 1 P46013 P46013 MKI67 Antigen KI-67 1 MKTPVQYSQQQNS(1)PQK;MKTPVQYSQQQNS(1)PQK;MKTPVQY(0.006)S(0.018)QQQNS(0.976)PQK;MKTPVQYSQQQNS(1)PQK;MKTPVQYSQQQNS(1)PQK 150.69 2.4051e-15 48927600.0 11084.07 10908.69 11120.86 10572.68 12446.900000000001 13516.83 12454.33 12288.769999999999 14286.07 13805.279999999999 15208.269999999999 True False 12209.316626738928 11828.00359035089 11875.58843476376 11225.730431301565 11572.672683473907 13406.753417970707 12928.286343420878 12043.660841996421 13685.676159046669 12933.61226477617 13337.749203166655 0.9153955769268916 0.886806567598578 0.8903742493481773 0.8416510357411988 0.8676630897157909 1.0051736026636091 0.9693004529093587 0.9029755064772855 1.0260858823014463 0.969699764762818 1.0 13.703227606236563 -7.720787671497854 0.8262154241311387 1.009608413204264 0.8789174853383263 0.48508718789677696 0.04261182765412853 0.28045622770383943 0.38577502601652114 0.008266514139878386 0.015300290110357427 1.9020079527845558e-08 7.720787671497854 -0.13069092786593772 MKTPVQYSQQQNS(ph)PQKHK ddPTM_A549_MK2206_60min_R1 1 MKTPVQYSQQQNSPQKHK 18 2 P46013 P46013 MKI67 Antigen KI-67 1 MKT(0.001)PVQY(0.029)S(0.148)QQQNS(0.823)PQKHK 40.012 0.023271 3484000.0 503.17 886.18 945.5 476.47 939.9 573.78 695.79 564.4 1001.8 1154.6 1218.9 True False 588.0927946745986 931.2827768191826 1079.586117376948 593.2051713895509 801.6419550780014 634.4970187556611 822.206036548359 644.4054284025082 774.8938995458687 893.7750580954742 916.2134900713788 0.6418731016815551 1.0164473530581064 1.1783128376475243 0.6474529984745547 0.8749510499081916 0.6925209305816156 0.8973956893870925 0.7033354511646679 0.845756920131682 0.975509603144834 1.0 9.839539994625627 -10.415777923638412 0.9381885359775288 0.9931368855864399 0.8404494093144345 0.12416874455026394 0.15606381371978004 0.8682584664853649 1.4568170498969497 0.0797796106709692 0.02829989713246352 3.8390350425886363e-11 10.415777923638412 -0.1526874762720054 MKTPVQYSQQQNS(ph)PQKHK ddPTM_A549_PD325901_60min_R1 2 MKTPVQYSQQQNSPQKHK 18 2 P46013 P46013 MKI67 Antigen KI-67 1 MKT(0.001)PVQY(0.009)S(0.042)QQQNS(0.948)PQKHK;MKTPVQYS(0.001)QQQNS(0.999)PQKHK 58.36600000000001 0.0012469000000000002 11006700.0 1837.69 1424.98 2210.5699999999997 1879.37 1922.29 2137.63 2237.6000000000004 2375.0 1644.81 2057.05 2215.3 True False 2024.2509359641233 1545.0680655677445 2360.5925734372827 1995.4544165410475 1787.2749819404874 2120.2218500089675 2322.7530924617035 2327.6287618485426 1575.6843556808506 1927.16751194165 1942.8321439437284 1.0419072704114953 0.7952658547389647 1.2150265172396975 1.0270853417580903 0.9199327834428981 1.0913047000062281 1.1955500631911404 1.1980596311957865 0.8110244421231319 0.9919372180191126 1.0 10.92394554556429 -8.77168024777944 24.999712446020382 0.9107615516428735 1.0565520660160697 0.15608291700913823 0.12727399372453033 248.95557159982894 607741.4416804198 0.023441842486815107 0.025090086630603338 1.691685988383687e-09 8.77168024777944 0.14579051437319612 MKVEMMSEAALNGNGDDLNNYDS(ph)DDQEKQSK ddPTM_A549_PD325901_60min_R1 5 MKVEMMSEAALNGNGDDLNNYDSDDQEKQSK 31 2 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;A0A3B3ITA2 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 MKVEMMSEAALNGNGDDLNNY(0.001)DS(0.992)DDQEKQS(0.007)K;MKVEMMSEAALNGNGDDLNNYDS(1)DDQEKQSK;MKVEMMS(0.001)EAALNGNGDDLNNY(0.005)DS(0.994)DDQEKQSK;MKVEMMSEAALNGNGDDLNNYDS(1)DDQEKQSK;MKVEMMSEAALNGNGDDLNNYDS(0.999)DDQEKQS(0.001)K 184.33 1.1832e-67 53103900.0 5084.45 4906.67 5480.099999999999 6169.83 5639.13 7155.52 5159.65 6690.290000000001 6371.540000000001 7409.929999999999 8117.14 True False 5600.619621025738 5320.172300859866 5852.012540518346 6550.92638639941 5243.0569627423865 7097.247817525093 5356.003304218816 6556.846917519027 6103.766331427201 6942.0657552134335 7118.783238789962 0.7867383277676145 0.7473429267898567 0.8220523570139019 0.9202311921373976 0.7365102696445625 0.9969748452028258 0.7523762312404978 0.9210628695352084 0.8574170791109393 0.975175886433288 1.0 12.797414957683081 -14.999999999912314 0.10650287442257964 1.535016900537845 0.732828682746992 0.42885671915025814 0.07384993721119534 62.635338337994995 0.4750677462021803 7.374967630553955 0.38072067833489864 1.000000000201905e-15 14.999999999912314 -0.8021882177908529 MKVQGS(ph)PLKK ddPTM_A549_PD325901_60min_R1 2 MKVQGSPLKK 10 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 MKVQGS(1)PLKK;MKVQGS(1)PLKK 56.205 0.0032156 10963000.0 4783.6 5175.9 5285.4 6643.1 6025.3 10930.8 8598.8 9119.9 8288.2 7040.4 6947.299999999999 True False 5269.227550499806 5612.091257822627 5644.0990276921375 7053.429199425257 5602.103714156562 10841.783188895186 8926.03203944391 8937.996440076859 7939.875776991887 6595.86794247782 6092.826142563199 0.8648248657039618 0.9210982106674176 0.9263515642213473 1.1576613273356822 0.9194589806233673 1.7794341960878834 1.4650068507762812 1.4669705373074573 1.303151541043587 1.0825629663712997 1.0 12.572895858623012 -6.498752088086775 1.6492309896961717 1.2344317041639365 0.8974561867609051 0.34270610395833434 0.2290830766667887 0.4519848523555805 2.3998313137803255 0.03897277134679501 0.11625767989033223 3.171377289979123e-07 6.498752088086775 -0.33697551740303144 MKYNT(ph)EGRVSPSPSQESLSSSK ddPTM_A549_MK2206_60min_R1 1 MKYNTEGRVSPSPSQESLSSSK 22 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 MKY(0.041)NT(0.443)EGRVS(0.443)PS(0.062)PS(0.011)QES(0.001)LSSSK 54.141000000000005 0.0024931 1985100.0 914.76 1052.3 1061.0 857.17 1029.4 801.78 820.94 656.74 1145.0 1396.8 1385.8 True False 1069.149124265231 1105.8575752632942 1211.4657541374324 1067.1766884798233 877.9766236379342 886.6238274215106 970.0941715805193 749.8349061818989 885.6593281892796 1081.2619098802686 1041.6676138657126 1.026382225993887 1.0616223069078317 1.163006066437628 1.0244886893617096 0.8428567922733933 0.8511581003571551 0.931289557885381 0.7198408553753544 0.8502321819361612 1.0380104896106142 1.0 10.02467928557365 -6.593400682051564 5.338424648459175 0.9011356289595553 1.0835530633703758 0.5049615885233092 0.08582400493562974 0.13775054266598005 7.247285653593545 0.012975455660716298 0.027533102599673724 2.550347254998341e-07 6.593400682051564 0.18241743441082048 MKYNT(ph)EGRVSPSPSQESLSSSK ddPTM_A549_PD325901_60min_R1 1 MKYNTEGRVSPSPSQESLSSSK 22 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 MKY(0.229)NT(0.246)EGRVS(0.246)PS(0.246)PS(0.033)QES(0.001)LSSSK 44.729 0.018618 4435100.0 1115.4 769.52 886.53 1113.2 1007.4 1490.9 1153.7 1316.9 1385.5 1294.3 1395.2 True False 1228.6345868859194 834.3701510306753 946.6952569379633 1181.9598357393675 936.6436993413313 1478.758604706319 1197.6046848288645 1290.6333964119356 1327.272253206035 1212.5776771133803 1223.599244901498 1.0041151888622053 0.681898223219191 0.7736971568776786 0.9659697328715804 0.7654824103922464 1.2085318055466452 0.9787556586186631 1.0547844008483627 1.0847279113128931 0.990992501969871 1.0 10.256915406365838 -7.245217323735758 24.962552936262792 1.0476012123743825 0.8330585087545558 0.5208513582286062 0.10242705608214651 475.64565216053506 731925.317670585 0.013946470289872405 0.02410863518557205 5.6856834441019864e-08 7.245217323735758 -0.21454270361982675 MLAES(ph)DES(ph)GDEESVSQTDKTELQNTLR ddPTM_A549_PD325901_60min_R1 3 MLAESDESGDEESVSQTDKTELQNTLR 27 1 P22059 P22059 OSBP Oxysterol-binding protein 1 2 MLAES(1)DES(0.997)GDEES(0.003)VSQTDKTELQNTLR;MLAES(1)DES(0.996)GDEES(0.004)VSQTDKTELQNTLR;MLAES(0.984)DES(0.853)GDEES(0.126)VS(0.028)QT(0.007)DKT(0.002)ELQNTLR 84.073 9.4934e-07 272246000.0 6412.200000000001 5925.200000000001 5447.900000000001 6858.8 6707.200000000001 6248.5 5821.1 7257.900000000001 6009.0 7074.1 7191.2 True False 7063.161823587849 6424.537398491211 5817.627254884018 7282.452498535011 6236.109410583858 6197.614287683574 6042.6251459281475 7113.135490787599 5756.462626860386 6627.44011872654 6306.727988772691 1.119940773751741 1.018679957329418 0.9224477835797936 1.1547116843312912 0.9888026599031148 0.9826988414145398 0.9581236350585117 1.127864639707069 0.9127494696311791 1.050852380271479 1.0 12.622675995307105 -7.64466442616393 0.6550199828609876 0.9654048189411762 1.0438782661530086 0.0 0.0806875235831686 1.1232665771605008 0.9692432245108779 0.016969614117699146 0.03610010469752403 2.2663948457391522e-08 7.64466442616393 0.07847344721183236 MLAES(ph)DESGDEESVSQTDKTELQNTLR ddPTM_A549_MK2206_60min_R1 2 MLAESDESGDEESVSQTDKTELQNTLR 27 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 MLAES(0.995)DES(0.004)GDEESVSQTDKTELQNTLR;MLAES(0.979)DES(0.014)GDEES(0.006)VS(0.001)QTDKTELQNTLR 80.418 1.1182e-06 9678100.0 2712.95 2747.3999999999996 2092.48 2100.65 3784.4 2466.2 2299.9 2978.8 3626.8 3614.0 3843.5 True False 3170.829634740649 2887.230924905801 2389.225128385949 2615.3093443017633 3227.719773164364 2727.171647068933 2717.7620596121965 3401.0540221924025 2805.3355908095014 2797.5948899679915 2889.0528747964117 1.0975325728381118 0.9993693608356895 0.8269925238229899 0.9052480025953354 1.117224195279506 0.9439673710579332 0.9407103910494244 1.1772211065649225 0.9710225850425773 0.9683432637643002 1.0 11.496380892686636 MLAESDES(ph)GDEESVSQTDKTELQNTLR ddPTM_A549_MK2206_60min_R1 3 MLAESDESGDEESVSQTDKTELQNTLR 27 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 MLAES(0.005)DES(0.968)GDEES(0.016)VS(0.004)QT(0.005)DKT(0.002)ELQNT(0.001)LR;MLAESDES(1)GDEESVSQTDKTELQNTLR;MLAESDES(0.999)GDEES(0.001)VSQTDKTELQNTLR 122.11 3.0935e-18 50845000.0 3940.2999999999997 4211.4 3353.8 3981.3 5847.799999999999 4735.8 3514.3399999999997 4204.4 6085.6 6357.9 6190.1 True False 4605.326308914129 4425.742271656219 3829.4192707126454 4956.718678727347 4987.596366533814 5236.939212630379 4152.850087646214 4800.386575434989 4707.221316706268 4921.645974246678 4652.927331931124 0.9897696612000947 0.95117373557162 0.8230129115563267 1.0652903699379588 1.071926555204504 1.1255149369497826 0.8925241662698908 1.031691714265966 1.0116687798673636 1.057752598127086 1.0 12.183922940340686 -6.283775104412542 24.997201563658464 1.0159381891943147 0.9243042354156483 0.32866932617468547 0.06765213628879249 737.4121497505986 825279.2466182264 0.00907045240602241 0.02109205651517807 5.202653416314587e-07 6.283775104412542 -0.09163395377866634 MLAESDES(ph)GDEESVSQTDKTELQNTLR ddPTM_A549_PD325901_60min_R1 4 MLAESDESGDEESVSQTDKTELQNTLR 27 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 MLAES(0.002)DES(0.998)GDEESVSQTDKTELQNTLR;MLAES(0.192)DES(0.806)GDEES(0.002)VSQTDKTELQNTLR;MLAESDES(1)GDEESVSQTDKTELQNTLR;MLAESDES(0.996)GDEES(0.003)VSQTDKTELQNTLR 185.3 4.3216e-58 48177300.0 5510.8 6826.8 6940.099999999999 6749.5 8225.4 7381.5 7375.3 7705.799999999999 6848.1 7160.7 7994.1 True False 6070.252359163458 7402.118394656683 7411.096920211569 7166.401285773323 7647.676280089527 7321.387511328528 7655.97107741902 7552.101773916843 6560.298171909238 6708.572179947297 7010.876378775134 0.8658336035621254 1.0558050084959425 1.0570856651599323 1.0221833760282848 1.090830285246828 1.0442899169486772 1.0920134179796492 1.0771979658320927 0.9357315430307707 0.9568806833132818 1.0 12.775379081007271 -8.761763726916605 24.999993709230488 0.969651006171508 1.042597513200311 0.22499216191924876 0.06049014355142342 9.37363205204664 722479.7116748302 0.01030935628668548 0.011314994315300851 1.730757702609741e-09 8.761763726916605 0.0729465070288029 MLDAEDIVNTARPDEK ddPTM_A549_MK2206_60min_R1 2 MLDAEDIVNTARPDEK 16 1 O43707 O43707 ACTN4 Alpha-actinin-4 0 ; 111.3 4.0311e-07 6445500.0 2782.7 3124.7 3069.8 2915.7 3758.7 3152.9 2717.2 3055.9 4812.1 4408.7 4017.9 False True 3252.351729516875 3283.733883327205 3505.143800236651 3630.0466308907476 3205.8002091197836 3486.537785274366 3210.8800679935057 3489.0831833012503 3722.167033344654 3412.771608024872 3020.144541601277 1.0768861174414128 1.0872770617747234 1.1605880950248255 1.2019446688356514 1.0614724444347527 1.1544274577751856 1.063154436406908 1.155270264465999 1.2324466534873744 1.1300027402713064 1.0 11.560401882047296 -11.079241354877313 1.4207773354975088 1.0004891653931185 1.1440375698307406 0.0 0.06600530697000163 0.3192353956604131 1.1570963333206847 0.04295448701476777 0.009593352616074559 8.332180032353575e-12 11.079241354877313 0.14354840443762207 MLDAEDIVNTARPDEK ddPTM_A549_PD325901_60min_R1 3 MLDAEDIVNTARPDEK 16 1 O43707 O43707 ACTN4 Alpha-actinin-4 0 ;; 133.71 3.1452e-10 22663500.0 10620.3 10323.3 10553.0 10992.2 12446.6 12493.5 11314.5 11685.5 12759.8 13108.099999999999 13787.599999999999 False True 11698.465037748367 11193.280720624502 11269.190040344178 11671.163228902513 11572.393754438961 12391.757078206729 11745.079489031976 11452.423535402584 12223.549979399764 12280.452328957654 12091.812606797519 0.9674699251601014 0.9256908856106569 0.9319686309072557 0.9652120495434626 0.9570437560315348 1.024805583841135 0.9713249676421032 0.947122148499432 1.0108947580388559 1.0156006157467317 1.0 13.561742905594397 -7.070649534049583 0.5271603868684488 1.003826936418688 0.933775768441098 0.44280512820785567 0.02422506081257922 0.7022249244482098 0.33848752620159434 0.005624628975216344 0.02189581632129034 8.49866021293102e-08 7.070649534049583 -0.07005116797759003 MLDS(ph)PKR ddPTM_A549_MK2206_60min_R1 2 MLDSPKR 7 1 Q9NXL9;Q9NXL9-4 Q9NXL9 MCM9 DNA helicase MCM9 1 MLDS(1)PKR;MLDS(1)PKR 49.813 0.022463 9629300.0 2231.5 2313.3 2154.69 2132.33 3071.4 2243.99 2297.22 2292.81 3011.0899999999997 3238.8 3079.4799999999996 True False 2608.1226450630347 2431.0370890968156 2460.257441830708 2654.750945723932 2619.601128658976 2481.447532359992 2714.5951383026772 2617.822838936136 2329.08292272267 2507.1528305557094 2314.7601266756997 1.12673560210692 1.050232834530507 1.0628563251449996 1.1468795038976691 1.131694424173907 1.0720106605273512 1.1727328058830844 1.1309261848637744 1.0061875940759095 1.0831156117054388 1.0 11.17664698268941 -8.769184397477558 24.949049880209774 1.0029219076114346 1.1106203869190259 0.3826582925233776 0.04280805380589156 73.87373730199981 237969.10304350394 0.006230592374903357 0.0066945372322831905 1.701435940819506e-09 8.769184397477558 0.10769847930759124 MLDS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 MLDSPKR 7 1 Q9NXL9;Q9NXL9-4 Q9NXL9 MCM9 DNA helicase MCM9 1 MLDS(1)PKR;MLDS(1)PKR 69.954 0.009046700000000001 14900400.0 4570.7 4518.4 4796.200000000001 4660.9 5533.9 5008.8 5127.7 4429.4 5647.1 5414.4 5641.9 True False 5034.714099228498 4899.181425326176 5121.698973893564 4948.793207328081 5145.217954918594 4968.009993462346 5322.8374294851055 4341.052142202922 5409.772025319237 5072.533859972717 4947.982066950803 1.0175287685169692 0.9901372638452791 1.0351086371357474 1.0001639335725763 1.0398618841578255 1.0040476958567244 1.0757592403250782 0.877337889156518 1.093328947461811 1.0251722401853145 1.0 12.272624556203526 MLEDSES(ph)SYEPDELTK ddPTM_A549_MK2206_60min_R1 4 MLEDSESSYEPDELTK 16 0 Q59FP8;Q92859-4;Q92859;Q92859-3;Q92859-2 Q59FP8 NEO1 Neogenin 1 MLEDS(0.207)ES(0.626)S(0.139)Y(0.028)EPDELTK;MLEDS(0.398)ES(0.508)S(0.056)Y(0.038)EPDELTK;MLEDS(0.074)ES(0.853)S(0.074)YEPDELTK;MLEDS(0.002)ES(0.981)S(0.017)YEPDELTK 118.13 1.3488e-07 10983100.0 3595.5099999999998 4536.47 3686.54 3621.12 5477.7 4260.38 4074.29 4882.7 6292.5 5849.91 5280.83 True False 4202.344186220299 4767.356946169986 4209.346806086529 4508.294562558255 4671.937586265311 4711.210583788635 4814.535754536015 5574.837677641619 4867.258797057675 4528.411268061058 3969.4541675064747 1.058670539798705 1.2010107044930907 1.0604346664445177 1.1357467229279707 1.1769722962187825 1.186866099211851 1.2128961694399414 1.4044343233073808 1.2261783589543702 1.140814599934204 1.0 11.954724923271916 -4.307128856052033 16.295629811872626 1.1435392060116245 1.1378681418675254 0.0 0.10478746866070318 0.0 0.0 0.016426936084990316 0.0 4.930274999942594e-05 4.307128856052033 -0.005671064144099125 MLEDSES(ph)SYEPDELTK ddPTM_A549_PD325901_60min_R1 2 MLEDSESSYEPDELTK 16 0 Q59FP8;Q92859-4;Q92859;Q92859-3;Q92859-2 Q59FP8 NEO1 Neogenin 1 MLEDS(0.175)ES(0.675)S(0.145)Y(0.005)EPDELTK;MLEDS(0.001)ES(0.88)S(0.12)YEPDELTK 132.05 3.8682e-10 9442600.0 4989.6 4589.0 4500.799999999999 5505.8 4874.4 5157.9 4920.6 4996.6 5909.6 4988.8 5463.200000000001 True False 5496.140518850621 4975.731135096904 4806.25135350906 5845.8807614209545 4532.038959767109 5115.8957724962975 5107.85612565564 4896.938893243132 5661.240063187578 4673.806316606064 4791.261034078176 1.1471177378479156 1.0385013673241077 1.0031286793443865 1.2201131852014997 0.9458969001130743 1.0677555942181265 1.066077612830038 1.0220563768939566 1.1815762119662478 0.975485635903219 1.0 12.226189700159372 MLESGLPEMNDPYVLS(ph)PEDDDDHQKDGK ddPTM_A549_MK2206_60min_R1 1 MLESGLPEMNDPYVLSPEDDDDHQKDGK 28 1 F5H8L7;E9PHB3;Q8TF68-3;Q8TF68-2;Q8TF68 F5H8L7 ZNF384 Zinc finger protein 384 1 MLESGLPEMNDPY(0.016)VLS(0.984)PEDDDDHQKDGK 65.587 0.00021891 1894600.0 612.45 754.34 633.43 484.28 1159.1 670.85 530.47 958.14 963.98 782.85 983.02 True False 715.8165870351135 792.7326839533528 723.2598988155258 602.9286217401551 988.5979254504849 741.8389017258097 626.8495324851 1093.959279180687 745.6400691597388 606.0036412870619 738.9090040281956 0.9687479556113232 1.072842095077655 0.9788213364198326 0.8159714098126599 1.3379156568144372 1.003965167133763 0.8483446934166475 1.480506088323351 1.0091094642166336 0.8201329771100445 1.0 9.529252898502845 -5.233879020608857 20.36553841803483 1.0350717720527842 0.968746884852697 0.009694405141717044 0.19694466497257232 3418.4881212525256 2525548.357847268 0.02336223676185166 1.7442796014161266 5.8360765449848685e-06 5.233879020608857 -0.06632488720008722 MLESGLPEMNDPYVLS(ph)PEDDDDHQKDGK ddPTM_A549_PD325901_60min_R1 5 MLESGLPEMNDPYVLSPEDDDDHQKDGK 28 1 F5H8L7;E9PHB3;Q8TF68-3;Q8TF68-2;Q8TF68 F5H8L7 ZNF384 Zinc finger protein 384 1 MLESGLPEMNDPY(0.001)VLS(0.999)PEDDDDHQKDGK;MLESGLPEMNDPY(0.017)VLS(0.983)PEDDDDHQKDGK;MLESGLPEMNDPY(0.003)VLS(0.997)PEDDDDHQKDGK;MLESGLPEMNDPY(0.003)VLS(0.997)PEDDDDHQKDGK;MLESGLPEMNDPY(0.003)VLS(0.997)PEDDDDHQKDGK 110.91 1.5020999999999999e-15 37483500.0 7517.79 8071.09 8433.68 8748.060000000001 9086.140000000001 9242.0 9920.94 8319.7 9285.07 10018.1 10494.6 True False 8280.990506495507 8751.269079792815 9006.040240637729 9288.407797914238 8447.960871881322 9166.736216175337 10298.486800646671 8153.757056821615 8894.850797600693 9385.555456300359 9203.830730750618 0.8997330295121748 0.9508289902110255 0.9785099817783417 1.0091893331850446 0.9178744284872727 0.9959696657119794 1.1189348328885202 0.8859090627970116 0.9664292029928796 1.0197444662843034 1.0 13.168018735613025 -5.352481586588037 1.8684101933004957 0.984218988716137 0.8822119912541643 0.17973607307425854 0.05626832950354061 0.8821840026873021 3.625643437127755 0.007353882367314483 0.146161584478759 4.441384917490982e-06 5.352481586588037 -0.10200699746197273 MLFKDDYPS(ph)SPPK ddPTM_A549_PD325901_60min_R1 1 MLFKDDYPSSPPK 13 1 H3BPC4;H3BQQ9;B0QYN7;P63279 H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 1 MLFKDDY(0.196)PS(0.402)S(0.402)PPK 42.338 0.019312 10852000.0 3669.4 3988.6 4095.6 4063.4 4225.1 5136.6 4401.5 4950.7 4592.3 4694.9 4747.5 True False 4041.914786730491 4324.733319992918 4373.552044843515 4314.386989349036 3928.343551803712 5094.769232634304 4569.001491093217 4851.9544047509835 4399.301601153428 4398.463212763355 4163.587596882069 0.9707769303946688 1.0387035745883006 1.0504287331720077 1.0362186189093017 0.9434996767560454 1.2236488638907361 1.097371289729738 1.1653302090688333 1.0566131968612538 1.0564118348457887 1.0 12.023611461513134 -5.227722198179215 2.6384565006265936 1.0505958108218025 0.9504945366407264 0.08991941437171902 0.07361468323835361 1.1740683408212862 9.788695526451406 0.010626903505305494 0.2670676945931307 5.9194015491934945e-06 5.227722198179215 -0.10010127418107617 MLFKDDYPSS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 MLFKDDYPSSPPK 13 1 H3BPC4;H3BQQ9;B0QYN7;P63279 H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 1 MLFKDDY(0.003)PS(0.087)S(0.911)PPK;MLFKDDY(0.004)PS(0.091)S(0.905)PPK 55.656000000000006 0.0039387 11020900.0 4453.700000000001 5152.6 5599.6 5208.1 7052.2 5101.799999999999 5085.4 4848.5 7629.400000000001 6496.6 7282.1 True False 5205.375677489244 5414.845331465979 6393.707480554161 6484.084733800495 6014.830721992847 5641.669089699247 6009.35135351618 5535.789722908512 5901.353081648288 5029.013547915347 5473.753594264326 0.9509700405483538 0.989238049944361 1.1680663680684875 1.1845773877353274 1.0988493761018927 1.0306764805070638 1.0978483503190717 1.0113333798417945 1.0781181469023418 0.9187504445185475 1.0 12.418314776666 -11.028258604842392 0.49826767661564403 0.9763763035121485 1.07436028238928 0.21697889789960245 0.07187287818498955 3.508529399423036 0.9669652374752455 0.17432478328271625 0.016972488704713042 9.37003892760356e-12 11.028258604842392 0.0979839788771314 MLFKDDYPSS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 MLFKDDYPSSPPK 13 1 H3BPC4;H3BQQ9;B0QYN7;P63279 H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 1 MLFKDDY(0.249)PS(0.112)S(0.638)PPK 43.297 0.016755000000000003 11015000.0 4041.6 3843.7 3940.8 3777.5 4901.8 4815.5 4247.9 4564.1 3944.5 3682.8 4319.3 True False 4451.900256731333 4167.622088466322 4208.246385955498 4010.8275956750463 4557.514478291975 4776.284164573935 4409.556159040071 4473.065445032815 3778.7263823682474 3450.267379489418 3788.0534822986247 1.175247466155066 1.100201490802968 1.1109258107416944 1.0588096536697365 1.203128334800182 1.2608808684706436 1.1640691399014549 1.180834818181743 0.9975377591752698 0.9108285813841691 1.0 11.887240984555584 -8.766855292726573 24.990347648451863 0.9988372616607254 1.155343605346435 0.6687511090774373 0.057701872819846116 60.55963822945221 279436.41370555095 0.009506985455076616 0.010264217127512746 1.710585188515354e-09 8.766855292726573 0.1565063436857096 MLGEDS(ph)DEEEEMDTSER ddPTM_A549_MK2206_60min_R1 9 MLGEDSDEEEEMDTSER 17 0 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(0.98)DEEEEMDT(0.017)S(0.003)ER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER 216.13 1.0287999999999999e-55 177482200.0 14720.980000000001 14385.409999999998 13362.03 12982.97 19296.829999999998 14878.759999999998 13925.910000000002 14232.960000000001 19580.54 20781.84 20620.22 True False 17205.521530593785 15117.565923945978 15256.966777339287 16163.798232827676 16458.29186935613 16453.220507478436 16456.067587101214 16250.525666611913 15145.57895369721 16087.207910385285 15499.650284879532 1.1100586925743992 0.9753488398827752 0.9843426462481549 1.0428492214818579 1.0618492396187666 1.0615220475993028 1.0617057342999991 1.0484446660364257 0.9771561729023183 1.0379077988668517 1.0 13.919948044212717 -8.758419803739855 24.99943113550178 0.9892126359095603 1.0408660362694202 0.12832552167089373 0.038459653229214505 72.02938611087701 596340.4988533931 0.006185153547131113 0.006867833524079479 1.7441353975291924e-09 8.758419803739855 0.05165340035985988 MLGEDS(ph)DEEEEMDTSER ddPTM_A549_PD325901_60min_R1 10 MLGEDSDEEEEMDTSER 17 0 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(0.971)DEEEEMDT(0.027)S(0.003)ER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER 194.53 1.5540999999999998e-48 305811000.0 12738.360000000004 13216.61 12539.619999999999 13469.76 15163.019999999999 14281.589999999998 13803.77 15173.75 13241.079999999998 15614.17 15286.020000000002 True False 14031.548929715 14330.420108396833 13390.634020060708 14301.756483155496 14098.021784779226 14165.285466086076 14329.080021062773 14871.09765267341 12684.603454696053 14628.288641469071 13405.936446064516 1.0466668245196806 1.0689607671983044 0.9988585336007393 1.0668226379182904 1.051625288654705 1.0566427435395218 1.0688608049659416 1.1092919702031716 0.9461930172300481 1.091179918711564 1.0 13.710584379094188 -8.771714146495494 24.995915647529817 0.9745911450259376 1.0571653183165042 0.013800606933279003 0.04438698964418487 98.50823491228833 239644.98200118574 0.005250353427369756 0.005618898876676861 1.6915539495313404e-09 8.771714146495494 0.0825741732905666 MLGEDS(ph)DEEEEMDTSERK ddPTM_A549_PD325901_60min_R1 1 MLGEDSDEEEEMDTSERK 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(0.998)DEEEEMDT(0.001)S(0.001)ERK 40.754 0.016069 12386000.0 3948.9 2995.4 2928.4 3395.6 3214.0 3228.8 3408.6 3720.9 3831.1 3451.3 4598.9 True False 4349.789420973465 3247.8328703572124 3127.1388338997344 3605.3385000328744 2988.2597276980737 3202.5057233052266 3538.3161382574895 3646.6837305104204 3670.092190009125 3233.384328997457 4033.2644548290577 1.0784786045371832 0.8052615708024198 0.7753369184992538 0.8939008439469363 0.7409034942204714 0.7940232432492351 0.8772834456766249 0.9041519025969692 0.9099557520000693 0.8016792266438423 1.0 11.97773228875997 -9.334487235767957 0.6706472169922961 0.9871729050983977 0.843669046725499 0.0 0.10156022042898952 0.5491617294334804 0.5451283349678449 0.030505018850479466 0.020776695700368546 4.629272693482453e-10 9.334487235767957 -0.1435038583728987 MLIS(ph)AVSPEIR ddPTM_A549_MK2206_60min_R1 1 MLISAVSPEIR 11 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 MLIS(0.705)AVS(0.295)PEIR 45.879 0.014327000000000001 2142700.0 917.49 1212.1 843.1 942.12 1839.9 867.63 788.84 1142.6 1394.4 1484.3 1629.9 True False 1072.3398815231383 1273.790712702308 962.6642575996875 1172.9394422933738 1569.2531473007914 959.4420307138181 932.1620170896495 1304.567049065745 1078.5706263992415 1148.9955991088789 1225.1508470484384 0.8752717137702322 1.0397011239644895 0.7857516157450176 0.9573836928890436 1.280865251067935 0.7831215503178646 0.760854893367098 1.0648215705099755 0.8803574098631778 0.9378401050588764 1.0 10.258743677065864 MLISAVS(ph)PEIR ddPTM_A549_MK2206_60min_R1 4 MLISAVSPEIR 11 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 MLIS(0.045)AVS(0.955)PEIR;MLIS(0.078)AVS(0.922)PEIR;MLIS(0.018)AVS(0.982)PEIR;MLIS(0.015)AVS(0.985)PEIR 97.734 0.00027821 9964000.0 3487.9 3739.4300000000003 3098.9300000000003 3401.6399999999994 4532.07 3649.6299999999997 3183.11 3109.59 5074.969999999999 4820.59 5901.5199999999995 True False 4076.572249032202 3929.7510146030822 3538.404872261179 4235.041952705421 3865.408506596824 4035.831424171677 3761.4398841567818 3550.3839052199814 3925.497398061787 3731.615370954842 4436.009710333947 0.918972796550825 0.8858752056940937 0.7976548978281666 0.9546962764395309 0.871370614359145 0.9097886812037335 0.8479331944189133 0.8003553051178297 0.8849163221886347 0.84120991941515 1.0 12.115046808194915 -10.346950130240076 0.8518818128641347 0.9960793392275199 0.8740832285965635 0.0 0.06402015578223205 0.35418202099696017 0.48772281671987455 0.024720842436310935 0.008641886333476591 4.498315057942346e-11 10.346950130240076 -0.12199611063095639 MLISAVS(ph)PEIR ddPTM_A549_PD325901_60min_R1 6 MLISAVSPEIR 11 0 A0AVK6;E9PMT9 A0AVK6 E2F8 Transcription factor E2F8 1 MLIS(0.026)AVS(0.974)PEIR;MLIS(0.022)AVS(0.978)PEIR;MLIS(0.075)AVS(0.925)PEIR;MLIS(0.004)AVS(0.996)PEIR;MLIS(0.001)AVS(0.999)PEIR;MLIS(0.008)AVS(0.992)PEIR 89.805 0.00030084 21712500.0 7515.72 8917.96 8962.21 8899.74 9396.09 9381.6 8351.94 9870.619999999999 10310.46 9322.0 10422.480000000001 True False 8278.710361619362 9669.507786783339 9570.439464746807 9449.456727023959 8736.14105315077 9305.199360059569 8669.77764705693 9673.742740748401 9877.147221790472 8733.40732909753 9140.581033544277 0.9057094216700223 1.057865769287313 1.0470274733766953 1.0337916913975342 0.9557533619679881 1.0180096129459575 0.9484930569774959 1.0583290827188685 1.080581987681432 0.9554542864449762 1.0 13.15807015974521 -8.305584855655546 24.98916792860798 1.0406365757980207 1.0004768202147483 0.021584405359049486 0.05340847162379456 727.2417605030662 411664.2550136192 0.008257454636329152 0.00998279652245897 4.947834270438886e-09 8.305584855655546 -0.04015975558327245 MLKEEKREEDEENDNDNES(ph)DHDEADS ddPTM_A549_MK2206_60min_R1 8 MLKEEKREEDEENDNDNESDHDEADS 26 3 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(0.998)DHDEADS(0.002);MLKEEKREEDEENDNDNES(0.998)DHDEADS(0.002);MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(0.998)DHDEADS(0.002);MLKEEKREEDEENDNDNES(1)DHDEADS 161.8 2.6632e-41 419639000.0 6260.7 7243.69 7638.49 6657.790000000001 8245.59 5994.610000000001 6241.410000000001 5028.220000000001 8757.06 9962.08 11044.61 True False 7317.353100580844 7612.362880698444 8721.742741113314 8288.948848879547 7032.674633867024 6628.955651299929 7375.393406880372 5740.985583277929 6773.5998921512755 7711.639209034956 8301.928521271027 0.8814040113489865 0.9169391017032016 1.0505682768487643 0.9984365473205142 0.8471133683996498 0.7984838262959453 0.8883951949216731 0.6915243329990732 0.8159067950050521 0.9288973266002418 1.0 13.019230795204939 -4.899342961719374 9.275750067382981 0.8989956711739021 0.7304452649095136 0.0 0.09868940933188187 146000.0950772391 517803.7116440866 0.015382470991759415 452631.0223232306 1.2608314645750039e-05 4.899342961719374 -0.16855040626438855 MLKEEKREEDEENDNDNES(ph)DHDEADS ddPTM_A549_PD325901_60min_R1 13 MLKEEKREEDEENDNDNESDHDEADS 26 3 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 MLKEEKREEDEENDNDNES(0.997)DHDEADS(0.003);MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(0.995)DHDEADS(0.005);MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(0.999)DHDEADS(0.001);MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(0.738)DHDEADS(0.262);MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(0.996)DHDEADS(0.004);MLKEEKREEDEENDNDNES(1)DHDEADS;MLKEEKREEDEENDNDNES(1)DHDEADS 196.15 9.404699999999999e-69 980860500.0 13696.830000000002 13646.97 13991.990000000002 14893.589999999998 16295.28 18611.85 16899.35 16837.079999999998 15693.699999999999 18763.93 17313.02 True False 15087.322098526682 14797.048055945379 14941.570582071012 15813.533228502954 15150.75574846417 18460.28126433919 17542.464011929158 16501.25123096626 15034.148365311852 17579.172257527673 15183.628296276196 0.9936572342347755 0.9745396664889625 0.984057979457746 1.0414857977247272 0.9978350004906212 1.2158017111671917 1.1553538897044437 1.0867791880161617 0.9901551903110666 1.157771509846496 1.0 13.890228959470868 -3.8144626019825134 13.629772485331829 1.0239291896665093 0.5843380651958825 0.0 0.08717759579027387 0.0 0.0 0.011079892559250777 0.0 0.0001532983209109675 3.8144626019825134 -0.43959112447062676 MLKPAFIFDGR ddPTM_A549_PD325901_60min_R1 2 MLKPAFIFDGR 11 1 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 67.77600000000001 0.0044916 3496900.0 1780.75 2177.82 1855.15 2069.0 2026.09 2212.06 2118.21 2246.21 2363.96 2519.9 2397.2 False True 1961.5304290811366 2361.352534459956 1981.0516349231991 2196.7974309600695 1883.784428031048 2194.0457167661557 2198.8196406789884 2201.4075794323435 2264.610982092342 2360.793083951177 2102.3595971028326 0.9330137583428799 1.1231915499679646 0.9422991374326245 1.0449199242543366 0.8960334048594764 1.0436110548308062 1.0458818004822215 1.0471127691314104 1.077175848134211 1.1229254439651903 1.0 11.037793740159342 MLLS(ph)PGGVSQPLTASLAR ddPTM_A549_MK2206_60min_R1 4 MLLSPGGVSQPLTASLAR 18 0 Q6PK04;I3L0U5 Q6PK04 CCDC137 Coiled-coil domain-containing protein 137 1 MLLS(0.992)PGGVS(0.007)QPLT(0.001)ASLAR;MLLS(1)PGGVSQPLTASLAR;MLLS(0.983)PGGVS(0.016)QPLTASLAR;MLLS(0.999)PGGVS(0.001)QPLTASLAR 73.498 0.00020279 10141300.0 4451.79 4466.57 4287.3099999999995 4253.88 6746.6 4964.41 5051.7 4593.98 6982.200000000001 6444.400000000001 6215.51 True False 5203.143316184254 4693.899334737027 4895.315025797313 5296.080790963928 5754.184077166978 5489.740571091346 5969.528499736048 5245.190733473699 5400.742848282261 4988.605564169822 4672.027327650797 1.1136799832890778 1.004681480982952 1.0477924640605196 1.1335723058852312 1.2316246617633364 1.1750232149972706 1.2777169483590465 1.1226798059229464 1.1559741562979853 1.0677603563329772 1.0 12.189832997525347 -4.147064096101071 12.746110598741812 1.1047196807368853 1.1175376338734373 0.0 0.08550301255066453 0.0 0.0 0.013161059247138056 0.0 7.12747830244325e-05 4.147064096101071 0.012817953136551985 MLLS(ph)PGGVSQPLTASLAR ddPTM_A549_PD325901_60min_R1 4 MLLSPGGVSQPLTASLAR 18 0 Q6PK04;I3L0U5 Q6PK04 CCDC137 Coiled-coil domain-containing protein 137 1 MLLS(0.997)PGGVS(0.003)QPLTASLAR;MLLS(0.999)PGGVS(0.001)QPLTASLAR;MLLS(0.988)PGGVS(0.012)QPLTASLAR;MLLS(0.994)PGGVS(0.006)QPLTASLAR 93.495 1.4226e-06 13426600.0 5064.3 5054.1 4582.71 5034.6 5520.9 5632.700000000001 5732.7 6577.0 5722.0 5490.0 5562.799999999999 True False 5578.424007859385 5480.026744365492 4893.7202586738995 5345.575807593803 5133.131030071031 5586.8291587157355 5950.861035553811 6445.816575443315 5481.524238791 5143.360463070737 4878.610865494592 1.143445165367549 1.1232760503865127 1.0030970687344984 1.0957167839316633 1.0521706222516347 1.145168022772676 1.2197859594916707 1.3212401548631898 1.1235830013745696 1.0542674144086104 1.0 12.252254698278502 -10.302069975252717 1.080536426045043 1.0111011700540884 1.1335117147155775 0.20774410927549358 0.08011061325933465 0.49637453122914543 1.1436226602196136 0.035948145929170554 0.015814746103836725 4.98804111684339e-11 10.302069975252717 0.12241054466148915 MLPHAPGVQMQAIPEDAIPEES(ph)GDEDEDDPDKR ddPTM_A549_MK2206_60min_R1 12 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR 33 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR 117.81 2.5509e-21 327824600.0 13499.919999999998 16750.2 14902.26 14370.980000000001 21651.359999999993 15447.21 16482.25 15898.58 23512.08 20982.920000000002 23523.23 True False 15778.37645464458 17602.71363411122 17015.62455160423 17891.870745137814 18466.473625383158 17081.82350917187 19476.861475300288 18152.252402359234 18186.63142107649 16242.863798729164 17681.762782879454 0.8923531351705585 0.9955293400472054 0.9623262544885954 1.0118827497483338 1.0443796725552448 0.9660701661325034 1.1015226091687507 1.0266087507935202 1.0285530715685136 0.9186224245953849 1.0 14.10997449089328 -3.8579899330136804 0.7629623905244 1.0195395336401853 6.950947261236118e-08 0.33182547971633125 0.04577438109272784 10.389989102729333 0.8054084456350241 0.005152571892729745 14.676605795767646 0.00013867879743730243 3.8579899330136804 -1.0195394641307127 MLPHAPGVQMQAIPEDAIPEES(ph)GDEDEDDPDKR ddPTM_A549_PD325901_60min_R1 19 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR 33 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR 205.61 2.2065999999999997e-89 3257067000.0 36612.53999999999 37395.3 40411.37 40553.43 45732.94 44061.38999999999 42997.09 45474.73 45265.05000000001 44350.7 49240.94 True False 40329.41810807259 40546.73316981677 43153.928581508946 43058.323267578104 42520.816064477985 43702.5686483473 44633.36778886044 44567.70083591446 43362.71736195153 41550.38923306218 43184.61654403668 0.9338838997666551 0.9389161329815218 0.9992893774454048 0.997075503117417 0.9846287744877438 1.0119939030553262 1.0335478547863548 1.032027244944213 1.004124172730195 0.9621571883286719 1.0 15.398229858879658 -5.768263179954102 4.241163215799001 1.0054004857778145 0.9343475060390788 0.6455927040826497 0.018944808600263992 0.06763079347610107 2.7971589075183254 0.0020992958244920546 0.007996484930964122 1.7050488261021842e-06 5.768263179954102 -0.0710529797387357 MLPHAPGVQMQAIPEDAVHEDS(ph)GDEDGEDPDKR ddPTM_A549_MK2206_60min_R1 41 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 33 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR 237.13 1.1052999999999996e-131 2482935500.0 60435.05 71551.70999999999 62580.30999999999 60529.600000000006 84237.87999999999 68853.16999999998 59012.560000000005 63129.46999999999 98542.74000000003 91204.75 100451.20999999999 True False 70635.00894488767 75193.38641693654 71455.13897106893 75359.3547172771 71846.59944124473 76139.16674836465 69734.37828105064 72078.26569839352 76222.96673041988 70601.53363055024 75506.40224464108 0.9354837052893862 0.9958544465316945 0.946345433590571 0.9980525157735958 0.9515299008481616 1.0083802761741105 0.9235558337836166 0.9545980679209111 1.0094901155991665 0.9350403612371962 1.0 16.204311356371257 -8.766739215483721 24.987895192530416 1.004481445884911 0.9655039641402476 0.0 0.033067833383729844 101.32023724667205 477706.8454769171 0.004031882600037543 0.004354022583329399 1.7110424509451586e-09 8.766739215483721 -0.03897748174466331 MLPHAPGVQMQAIPEDAVHEDS(ph)GDEDGEDPDKR ddPTM_A549_PD325901_60min_R1 32 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 33 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR 293.41 3.901099999999999e-201 8448514100.0 102579.78999999998 106865.2 107374.79999999997 105739.76 120942.9 117139.87999999999 109417.99000000002 117859.65 120411.50000000001 118232.71 134267.15000000002 True False 112993.61476555 115871.10544745199 114661.8996251255 112271.06482278137 112448.28793435458 116185.93165488353 113581.9514852715 115508.84682164331 115351.02339727075 110767.47651287938 117753.14173959008 0.9595804672068476 0.9840171033712188 0.9737481134787823 0.9534443256814984 0.9549493650286874 0.9866907153256903 0.9645768240855677 0.9809406790783552 0.9796003885176024 0.9406753389038279 1.0 16.845406026942893 -9.73947394443558 0.4070432374718179 1.002530378542474 0.9668582135260471 0.0 0.02026706012042692 0.6993783392768449 0.24469212668244192 0.010069192357965516 0.003868496042391823 1.8219063753670008e-10 9.73947394443558 -0.03567216501642689 MLQHIDYR ddPTM_A549_MK2206_60min_R1 1 MLQHIDYR 8 0 J3KRY3;S4R3P3;J3QLE5;P14678-2;P63162;P14678;P63162-2;P14678-3 J3KRY3 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated proteins B and B;Small nuclear ribonucleoprotein-associated protein N 0 67.169 0.0087444 876150.0 161.53 0.0 212.61 250.98 169.62 99.425 163.93 147.75 223.77 210.39 327.88 False True 188.7923149706619 0.0 242.76129499261017 312.4701112669204 144.66912269425532 109.94608750702642 193.71395905570995 168.69401496539803 173.08645228726203 162.8627528777991 246.4583469723552 0.7660211848772904 0.0 0.9849992827381914 1.2678414632959039 0.5869921813217492 0.4461041342590798 0.785990661040336 0.6844727193772834 0.7022949492827558 0.6608124856735614 1.0 7.9452000323448395 -10.690024654169502 0.5383143903283277 1.0570014582457667 0.6803651130710235 0.0 0.3154516664879662 2.3442085039251404 0.9440317127811866 0.44879532899136404 0.07066752627717235 2.041622041919881e-11 10.690024654169502 -0.3766363451747432 MLRLS(ph)QDVK ddPTM_A549_PD325901_60min_R1 1 MLRLSQDVK 9 1 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-4 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 MLRLS(1)QDVK 51.013000000000005 0.0061273000000000005 4043200.0 1754.9 2082.1 1618.6 2107.5 2430.3 2197.7 1845.7 1534.6 2438.2 1903.4 2303.2 True False 1933.056156110901 2257.565874130586 1728.4479294324922 2237.6754885202267 2259.6041120798454 2179.802659845112 1915.9391235057933 1503.991199129589 2335.7309330688972 1783.2189991637233 2019.921001187737 0.9569959196296497 1.1176505778211678 0.8557007568197691 1.1078034671675019 1.1186596459718832 1.0791524314878467 0.9485218097040423 0.7445792178234816 1.1563476649311832 0.882816208215653 1.0 10.980083155152347 MLRPVS(ph)R ddPTM_A549_MK2206_60min_R1 1 MLRPVSR 7 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 MLRPVS(1)R 40.501999999999995 0.032171 4848300.0 644.95 701.95 672.18 508.83 725.29 839.06 506.49 553.23 959.73 1051.5 773.99 True False 753.8017924864015 737.6762567291362 767.5052314949096 633.4933728422467 618.6008017858535 927.8487722770492 598.5126768872477 631.6520466958184 742.3526873738839 813.9654197015341 581.7869219627096 1.2956664442428245 1.2679491904708344 1.3192204955478595 1.0888752375269983 1.0632772556986139 1.5948257639530112 1.02874893589583 1.0857102881668161 1.275987237508694 1.3990782346147448 1.0 9.184347056113932 -13.985879537633009 0.30094299534951857 6.498409759282251e-12 1.2432967568551303 0.0 0.19538255873283794 27.424111985219234 0.6307767460280393 16.41986625098259 0.05563785845771136 1.0330479075342795e-14 13.985879537633009 1.243296756848632 MLRPVS(ph)R ddPTM_A549_PD325901_60min_R1 2 MLRPVSR 7 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 MLRPVS(1)R;MLRPVS(1)R 62.582 0.0075765 45107000.0 3913.5 4415.3 4208.5 4074.1 5282.8 4806.9 4345.8 5280.7 4818.9 4697.8 5137.200000000001 True False 4310.795639033568 4787.392826496697 4494.114117766367 4325.74790404757 4911.75435267062 4767.754200122617 4511.1817971130085 5175.372295870991 4616.378391176159 4401.180106268434 4505.3569673939055 0.9568155576198704 1.062600113852007 0.9975045596366935 0.9601343323856025 1.0902031488776334 1.058241163714158 1.0012928675266484 1.1487152590407619 1.0246420926434323 0.9768771127616706 1.0 12.137425702506988 -6.731439046476343 24.999815212482414 1.0297532081248106 0.9993763600858637 0.13366594576729074 0.0526455544610283 477.1642872458099 397627.3477986364 0.007384725621011235 0.015371016464275565 1.8559272718003476e-07 6.731439046476343 -0.030376848038946913 MLVDLAK ddPTM_A549_MK2206_60min_R1 1 MLVDLAK 7 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;K7ENA0;A0A0J9YXM3;A0A0J9YXH9;K7EIL4 P06744-2 GPI Glucose-6-phosphate isomerase 0 91.906 0.03419 2088400.0 1136.4 1294.1 1159.8 1212.6 2351.8 1414.3 1248.2 1445.1 2311.3 2164.6 2332.1 False True 1328.1965376874898 1359.96416245199 1324.2770797818976 1509.6870544356832 2005.8533354106225 1563.9602872636412 1474.9817830374984 1649.9473504331422 1787.7942403876684 1675.6153566200103 1752.9752073143513 0.7576813021345326 0.7758034208227768 0.7554454131788655 0.8612141507401019 1.1442565342858977 0.8921747898874789 0.8414162259015898 0.9412268602252207 1.0198628211785503 0.9558693982826715 1.0 10.775589876573815 -6.529316328643405 24.80664593831058 0.9906489483348095 0.7716044311508263 0.5964523188027775 0.07424070625339098 69.59131951539321 268163.65568137454 0.01092382637133547 0.022786253800667757 2.955858712770793e-07 6.529316328643405 -0.2190445171839832 MLVDLAK ddPTM_A549_PD325901_60min_R1 3 MLVDLAK 7 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;K7ENA0;A0A0J9YXM3;A0A0J9YXH9;K7EIL4 P06744-2 GPI Glucose-6-phosphate isomerase 0 ;; 119.89 0.018556 7992100.0 5640.9 6625.4 6928.4 7006.799999999999 7927.3 8418.9 5819.4 7757.0 9305.9 7253.0 7548.5 False True 6213.5600153889 7183.745709843323 7398.602887853745 7439.594122402624 7370.513795700355 8350.3392696774 6040.860451497871 7602.280549751218 8914.805385138969 6795.044342195274 6620.0823538839995 0.9385925556867744 1.0851444628371765 1.117599826158203 1.12379177851735 1.113356813662005 1.2613648627464975 0.9125053328005354 1.148366461829733 1.3466305868398534 1.0264289745895117 1.0 12.692633448945491 -4.214908410844571 0.8382045678835792 1.1508067996524023 9.408628258042475e-10 0.11801291640535627 0.11572846433944742 16.079109450617665 2.2131348369902453 0.02161620802350734 25.920944279201816 6.096654571438452e-05 4.214908410844571 -1.1508067987115396 MLWGSDPYPHAEPQQAT(ph)TPK ddPTM_A549_PD325901_60min_R1 1 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPYPHAEPQQAT(0.5)T(0.5)PK 77.57600000000001 7.727e-05 5462400.0 2568.3 2478.4 2753.3 2106.7 2938.9 3125.8 2870.7 2700.6 2638.4 2920.7 3871.9 True False 2829.0319253174703 2687.263465945558 2940.1554949378974 2236.826074337158 2732.4818026545954 3100.3445211556855 2979.946059407314 2646.734414420285 2527.517223283149 2736.28650355022 3395.6808459963536 0.8331265668424094 0.7913769249291939 0.8658515414970346 0.6587268285164276 0.8046933521082533 0.9130258884050066 0.8775695345223011 0.7794414535573603 0.7443329741259975 0.8058138051390824 1.0 11.729485153583745 -10.878892368798697 1.073699722108478 1.0024207274010757 0.8040782121075969 0.0 0.08628978253567127 0.3364273649804146 0.674834206984992 0.051086692080247714 0.011712308921022494 1.3216231314632972e-11 10.878892368798697 -0.1983425152934788 MLWGSDPYPHAEPQQATT(ph)PK ddPTM_A549_MK2206_60min_R1 4 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPYPHAEPQQAT(0.224)T(0.776)PK;MLWGSDPYPHAEPQQAT(0.202)T(0.798)PK;MLWGSDPYPHAEPQQAT(0.166)T(0.834)PK;MLWGSDPYPHAEPQQAT(0.175)T(0.825)PK 91.583 3.0561000000000003e-06 17432500.0 8501.4 9386.7 8981.4 8605.5 12311.3 9756.5 8974.099999999999 9117.4 13766.3 13689.199999999999 14316.4 True False 9936.228480725465 9864.442936162657 10255.097572299645 10713.847886315578 10500.32407868049 10788.926354159445 10604.577807368065 10409.819370866466 10648.255030263823 10596.800212437694 10761.242767460742 0.9233346645398699 0.9166639159921399 0.9529659161029661 0.9955957799513199 0.9757538516304823 1.002572526918769 0.9854417409328974 0.9673436048058602 0.9895004936104066 0.9847189996010237 1.0 13.393557077417931 -6.026087261938289 2.5731687047454823 0.9915590509999451 0.9193902330899111 0.8604046902415458 0.010539019642149244 0.06913972600247027 0.8991848780066077 0.0015652833464232972 0.005603150208578665 9.417003635056719e-07 6.026087261938289 -0.07216881791003404 MLWGSDPYPHAEPQQATT(ph)PK ddPTM_A549_PD325901_60min_R1 4 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPY(0.002)PHAEPQQAT(0.256)T(0.743)PK;MLWGSDPYPHAEPQQAT(0.166)T(0.834)PK;MLWGSDPYPHAEPQQAT(0.134)T(0.866)PK;MLWGSDPYPHAEPQQAT(0.15)T(0.849)PK 91.729 9.0449e-07 22075400.0 10060.3 9789.5 9847.2 9816.7 11935.9 11318.6 9984.5 10735.2 12044.5 12016.4 13767.8 True False 11081.614249998574 10614.495521253237 10515.490208024 10423.055263656704 11097.563560619612 11226.42507426987 10364.465611228046 10521.078014398525 11538.311550877013 11257.68245326834 12074.447881274982 0.9177739933917731 0.8790874436349313 0.870887870933742 0.8632324530400058 0.9190949076710729 0.9297671566150678 0.8583800860411372 0.8713506503858103 0.9555974454757963 0.9323558777976689 1.0 13.559669601144027 -8.969663899463335 2.503959458381221 0.9829873338282948 0.8883336807881577 0.5441980247674407 0.028808980787731704 0.1040518557561275 1.296796495971337 0.005099705358449335 0.005176780959482551 1.0723488750801978e-09 8.969663899463335 -0.09465365304013718 MMRWNFSPEDLSSIFRNNSTLPK ddPTM_A549_PD325901_60min_R1 1 MMRWNFSPEDLSSIFRNNSTLPK 23 2 Q6ZRG5 Q6ZRG5 Putative uncharacterized protein FLJ43944 0 45.696000000000005 0.0059073 79890000.0 2206.8 2061.3 2122.6 2357.9 2934.0 3584.4 3215.6 2804.5 2897.7 2209.6 2387.6 False True 2430.8327114397043 2235.012985132979 2266.6524002306996 2503.5421278205667 2727.925961750511 3555.2098348040313 3337.9714176438383 2748.562047412312 2775.91974602319 2070.0854789073046 2093.9403362434196 1.160889195057333 1.0673718569950503 1.082481845828105 1.1956129238677273 1.30277158070534 1.6978563205779613 1.5941100898950356 1.312626725718126 1.325691901519629 0.9886076709430455 1.0 11.032004620038716 -4.216576868490288 16.501388183601673 1.2258490783167295 1.1783853201177918 0.0 0.22154776342206062 0.0 0.0 0.03232579270801019 0.0 6.073277586203037e-05 4.216576868490288 -0.04746375819893767 MMS(ph)PLKNSSDGLTSLNQSNSTLVALPEGR ddPTM_A549_PD325901_60min_R1 1 MMSPLKNSSDGLTSLNQSNSTLVALPEGR 29 1 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 MMS(0.664)PLKNS(0.132)S(0.132)DGLT(0.036)S(0.036)LNQSNSTLVALPEGR 55.783 0.00096758 3480700.0 958.5 653.05 826.38 1050.7 880.98 1054.6 1125.2 1225.7 698.09 710.21 843.49 True False 1055.8062143895945 708.0848153791745 882.4631162266297 1115.5993526871655 819.1030040160078 1046.011687251516 1168.020101733066 1201.2524519569515 668.7517049733679 665.3672193948036 739.746077323656 1.4272549010458015 0.9571998244870329 1.1929270641343757 1.5080841749419174 1.1072759006434465 1.4140145102707475 1.5789473409022623 1.6238713374499936 0.9040287275234493 0.8994535284351228 1.0 9.530886330986807 -8.78594675645292 24.958983658679788 0.9546801631514132 1.339572504537005 0.479286260929906 0.19284880413164657 149.70444815466607 152462.3659034809 0.03459523382097945 0.03683765147366789 1.6370172038301018e-09 8.78594675645292 0.3848923413855918 MMS(ph)PTGSNLK ddPTM_A549_PD325901_60min_R1 1 MMSPTGSNLK 10 0 Q7Z3T8 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 1 MMS(0.97)PT(0.025)GS(0.005)NLK 41.448 0.025061 3314000.0 1486.8 1235.1 1169.3 1191.0 1687.2 1587.9 1496.5 1389.7 1646.1 1275.4 1690.4 True False 1637.7388414756888 1339.1862115838267 1248.655729572108 1264.5653650427469 1568.696892524016 1574.9686688665665 1553.4501264162222 1361.9813433014403 1576.9201414669465 1194.871026338875 1482.4915163284793 1.10472054877703 0.903334823055473 0.8422683811806989 0.8530000685430931 1.0581489844940442 1.0623795492382413 1.0478644291088277 0.9187110538578372 1.063695895793271 0.8059884412007148 1.0 10.533808133523854 -6.772870986265908 24.995147721053545 1.0276306417911159 0.9182553277680878 0.03101063631897305 0.1002838452042171 191.87020753284168 419523.5500296412 0.010726238397569608 0.020397429297927788 1.6870541158579807e-07 6.772870986265908 -0.10937531402302803 MNDFHIS(ph)DDEEKNPSK ddPTM_A549_MK2206_60min_R1 3 MNDFHISDDEEKNPSK 16 1 A8MSM7;A0A0C4DG83;A2VCS9;E7ETZ8;Q49MG5-2;Q49MG5 A8MSM7 MAP9 Microtubule-associated protein 9 1 MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK 80.752 7.6395e-05 10300400.0 4616.1 5101.5 4767.3 4039.7 6677.7 4602.6 5312.1 4758.4 7963.400000000001 7814.2 8043.799999999999 True False 5395.184827190443 5361.144559731726 5443.374825352857 5029.426681349024 5695.419175895699 5089.644077041389 6277.239809063853 5432.917771988829 6159.702614936688 6048.966792802401 6046.302462413781 0.8923114350843439 0.8866815037882626 0.9002815951056102 0.8318185721958071 0.9419672951031953 0.84177794754408 1.0381948055172017 0.8985520995289279 1.0187552894066825 1.0004406545000326 1.0 12.561837435329641 -7.98301369818915 0.9972834606768421 1.0075680880845854 0.881282269384073 0.49004984177077127 0.049165252074572084 0.24849414254591998 0.49389137746699363 0.00836443775827149 0.0127211186128061 1.0398873659684227e-08 7.98301369818915 -0.12628581870051248 MNDFHIS(ph)DDEEKNPSK ddPTM_A549_PD325901_60min_R1 5 MNDFHISDDEEKNPSK 16 1 A8MSM7;A0A0C4DG83;A2VCS9;E7ETZ8;Q49MG5-2;Q49MG5 A8MSM7 MAP9 Microtubule-associated protein 9 1 MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK 137.64 3.6969e-11 65400000.0 20565.3 20416.1 20019.100000000002 20159.9 23662.600000000002 24753.2 22323.699999999997 23377.7 25142.699999999997 23986.7 24688.1 True False 22653.074116626318 22136.63639730918 21377.71651062771 21405.131236545167 22000.620607538407 24551.618146097295 23173.240619497377 22911.413434049133 24086.03975509448 22472.17566840418 21651.620210760244 1.0462530700297605 1.0224009188147452 0.9873495056043698 0.9886156799437772 1.0161189044228995 1.1339390727856862 1.07027743854388 1.0581847090899372 1.112435906441976 1.0378981087630634 1.0 14.402187366744835 -7.033127142210368 24.875959581045993 1.0617914038059328 1.009271383150358 0.365461241496422 0.036545733009162105 704.007865006381 528655.2336230307 0.007044800932333637 0.012207003052018751 9.265585283251376e-08 7.033127142210368 -0.05252002065557493 MNGVMFPGNS(ph)PSYTER ddPTM_A549_MK2206_60min_R1 12 MNGVMFPGNSPSYTER 16 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 MNGVMFPGNS(0.95)PS(0.049)Y(0.001)T(0.001)ER;MNGVMFPGNS(0.994)PS(0.006)YTER;MNGVMFPGNS(0.933)PS(0.067)YTER;MNGVMFPGNS(0.985)PS(0.013)Y(0.001)T(0.001)ER;MNGVMFPGNS(0.992)PS(0.008)YTER;MNGVMFPGNS(0.997)PS(0.003)YTER;MNGVMFPGNS(0.875)PS(0.124)YT(0.002)ER;MNGVMFPGNS(0.998)PS(0.001)YTER;MNGVMFPGNS(0.894)PS(0.098)YT(0.007)ER;MNGVMFPGNS(0.997)PS(0.003)YTER;MNGVMFPGNS(0.499)PS(0.499)YT(0.002)ER;MNGVMFPGNS(0.916)PS(0.083)YTER 179.79 6.0956e-29 149129500.0 23313.65 25174.410000000003 24115.300000000003 24100.500000000004 33659.3 25940.0 23315.1 24481.200000000004 37539.4 35440.3 37952.6 True False 27248.424155981997 26455.679940401078 27535.212159048457 30005.123581912554 28708.06155820508 28684.953582421564 27551.151874457297 27951.48507053063 29036.785838103584 27434.31161564268 28527.92198152682 0.9551492805408905 0.9273609188055262 0.9652021684887813 1.0517809043835122 1.0063145004671181 1.0055044878837103 0.9657609093399082 0.9797939397279108 1.0178373965305387 0.9616652637162881 1.0 14.800087042132207 -6.013446212614646 18.60147353560412 1.0055671870080463 0.9425112749046352 0.4350855611182838 0.025015001066821013 10.471613739918148 14489.664876377952 0.00299105186056777 0.00836334859621592 9.695133361223817e-07 6.013446212614646 -0.0630559121034111 MNGVMFPGNS(ph)PSYTER ddPTM_A549_PD325901_60min_R1 13 MNGVMFPGNSPSYTER 16 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 MNGVMFPGNS(0.958)PS(0.039)Y(0.001)T(0.002)ER;MNGVMFPGNS(0.939)PS(0.052)Y(0.007)T(0.003)ER;MNGVMFPGNS(0.967)PS(0.032)YT(0.002)ER;MNGVMFPGNS(0.998)PS(0.002)YTER;MNGVMFPGNS(0.997)PS(0.003)YTER;MNGVMFPGNS(0.999)PS(0.001)YTER;MNGVMFPGNS(0.99)PS(0.01)YTER;MNGVMFPGNS(0.759)PS(0.222)YT(0.019)ER;MNGVMFPGNS(0.998)PS(0.002)YTER;MNGVMFPGNS(0.957)PS(0.042)Y(0.001)TER;MNGVMFPGNS(0.967)PS(0.033)YTER;MNGVMFPGNS(0.813)PS(0.187)YTER;MNGVMFPGNS(0.916)PS(0.083)YT(0.001)ER 213.94 2.5591e-46 231322300.0 35376.1 35094.200000000004 34398.899999999994 36008.299999999996 41472.399999999994 40262.90000000001 35680.5 40812.200000000004 42264.200000000004 41620.200000000004 45041.59999999999 True False 38967.45562949162 38051.711397105624 36733.416211389704 38232.45091021727 38559.521696012904 39935.01229152198 37038.34095261878 39998.16865444846 40487.982651714556 38992.29346905225 39501.768742227134 0.9864736914384207 0.9632913312164828 0.9299182639414807 0.967866810210628 0.9761467125089268 1.0109677000066004 0.937637531987904 1.012566523677981 1.0249663227974186 0.9871024693476509 1.0 15.269629632801463 -8.291478224336037 23.66601917838207 1.0121773417810855 0.9678883452215544 0.3959930141214827 0.022539188378762523 230.02682334593194 181225.28477461895 0.0036064016875480692 0.004360337624653727 5.11118706049998e-09 8.291478224336037 -0.04428899655953111 MNIAS(ph)PGTVHK ddPTM_A549_MK2206_60min_R1 2 MNIASPGTVHK 11 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 MNIAS(0.992)PGT(0.008)VHK;MNIAS(0.999)PGT(0.001)VHK 93.494 8.9245e-05 6149600.0 3025.8 2803.8 2463.2 2598.7 3570.8 2829.9 2918.6 3485.6000000000004 4006.2999999999997 4153.7 3787.5 True False 3536.4810662925092 2946.5014440019245 2812.518798860814 3235.381616660074 3045.540050210157 3129.35813966441 3448.8718410296783 3979.6944742023115 3098.87944674647 3215.376285130065 2846.9592203177845 1.2421958983654704 1.0349644009558483 0.9879027345347342 1.1364341271804144 1.0697519052872864 1.0991931733096982 1.2114229864678943 1.3978754756304828 1.0884874727501597 1.1294072153134518 1.0 11.47520611280842 -9.545985564292417 1.814255580677163 1.024294073462264 1.1379254110146155 0.043611009748593665 0.11163882176079916 0.4215212790603247 2.799460999342502 0.025816028420600018 0.020804983957484646 2.844555657328083e-10 9.545985564292417 0.11363133755235144 MNIAS(ph)PGTVHK ddPTM_A549_PD325901_60min_R1 4 MNIASPGTVHK 11 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 MNIAS(0.996)PGT(0.004)VHK;MNIAS(1)PGTVHK;MNIAS(0.969)PGT(0.031)VHK;MNIAS(0.966)PGT(0.034)VHK 85.837 0.00012109999999999999 25389900.0 11063.0 11509.8 10570.7 11635.6 14480.7 11949.099999999999 11096.5 13785.8 12977.9 13475.099999999999 13839.5 True False 12186.10761584984 12479.771239646607 11288.091268782933 12354.304585635096 13463.625587703016 11851.790491311476 11518.78337973779 13510.831404249115 12432.48399486294 12624.279886325043 12137.329235818725 1.0040188726105546 1.0282139502994856 0.9300309029659023 1.01787669639677 1.1092741513487359 0.9764743347601885 0.9490377294655952 1.1131634597483786 1.0243179329908245 1.040120082519412 1.0 13.567163377573275 -6.471492308251737 24.999291587826736 1.0193963201167329 0.9885760601975901 0.09238205472456174 0.051987779322472144 793.5023220426423 386035.22882538737 0.007067056900309076 0.01642217965649742 3.3768182923983236e-07 6.471492308251737 -0.030820259919142723 MNIAS(ph)PGTVHKR ddPTM_A549_MK2206_60min_R1 1 MNIASPGTVHKR 12 1 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 MNIAS(0.997)PGT(0.003)VHKR 48.177 0.0074616 2998700.0 569.4 614.99 613.57 478.71 737.24 724.87 573.23 597.99 820.1 968.82 1062.9 True False 665.5007995065614 646.2903641653271 700.5834521829446 595.9939714901085 628.7929726159226 801.5752622702365 677.378470990695 682.7569137675696 634.3486594305916 749.9628891252879 798.9525954523497 0.8329665655942569 0.8089220409871896 0.8768773719125218 0.7459691286848747 0.7870216283106429 1.0032826313260825 0.8478331190690706 0.8545649862755716 0.7939753410168686 0.9386825869195345 1.0 9.641966095512853 -10.865179484295483 0.9908122596853797 1.004896524244417 0.8373105197017183 0.36384644242063924 0.06485418062151295 0.4168978936930313 0.6908793529633981 0.05150730713552478 0.011094160038637033 1.3640193011044552e-11 10.865179484295483 -0.16758600454269867 MNIAS(ph)PGTVHKR ddPTM_A549_PD325901_60min_R1 2 MNIASPGTVHKR 12 1 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 MNIAS(0.992)PGT(0.008)VHKR;MNIAS(0.996)PGT(0.004)VHKR 49.482 0.006852500000000001 6552100.0 1245.62 1008.1099999999999 1347.49 1666.6999999999998 1409.57 1531.2600000000002 1501.33 1231.74 1243.7800000000002 1709.17 1427.96 True False 1372.0744254230215 1093.066967662353 1438.9387745156243 1769.648273649662 1310.5666659525116 1518.7899262476346 1558.4639347092984 1207.1719794186629 1191.50825196146 1601.2527145112226 1252.329972584249 1.095617333658216 0.8728266444080641 1.149009291493917 1.4130846601059142 1.0465026747288402 1.212771361778982 1.244451517433002 0.963940818990062 0.9514331510430274 1.2786188541083572 1.0 10.29039902831358 -8.281477795536368 24.360068569226122 0.9754404698850457 1.1460378876656465 0.013750912317198716 0.15544194697387959 571.6907838621063 694984.3580229308 0.0211097067729653 0.02553844896998469 5.230247065315697e-09 8.281477795536368 0.17059741778060078 MNLASEPQEVLHIGS(ph)AHNR ddPTM_A549_PD325901_60min_R1 2 MNLASEPQEVLHIGSAHNR 19 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 MNLASEPQEVLHIGS(1)AHNR;MNLAS(0.004)EPQEVLHIGS(0.996)AHNR 73.036 0.00071208 5345800.0 768.5 640.28 853.7 825.1100000000001 1079.82 823.15 681.13 779.45 896.28 909.4599999999999 611.1 True False 846.5175542602015 694.2386426628555 911.6372157151358 876.075170739229 1003.9771683767675 816.4465393145123 707.0507748786375 763.9032582833039 858.6124684976578 852.0365403905848 535.9385740820709 1.579504807449389 1.2953697983988428 1.7010106377891216 1.6346559346651381 1.873306414072415 1.5233957374926437 1.3192757697832054 1.4253559926931545 1.6020725322267515 1.5898026034978185 1.0 9.065923847275956 -11.098482778195224 0.5035489808034523 0.7993718473346233 1.5703892727163369 0.0 0.23661801125119433 1.090291257031743 0.2948099885775782 0.4341571328818974 0.03849716819193869 7.971080990229606e-12 11.098482778195224 0.7710174253817136 MNLRPLGT(ph)PR ddPTM_A549_MK2206_60min_R1 1 MNLRPLGTPR 10 1 Q8IYB7;Q8IYB7-4;Q8IYB7-5;Q8IYB7-3;Q8IYB7-2;C9JGP4 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 MNLRPLGT(1)PR 42.809 0.029330000000000002 1975300.0 378.83 518.29 503.69 302.1 593.91 537.99 356.58 511.89 451.23 695.01 782.16 True False 442.7672424957337 544.6687472044217 575.120815929767 376.1145135617843 506.5466257478198 594.9197447111403 421.3659703537187 584.4519750973776 349.027125466243 538.0067582945916 587.9280854821804 0.7530976210000322 0.9264206977928597 0.9782162651033931 0.6397287744015828 0.8615792275553279 1.0118920313582669 0.7166964476754698 0.9940875245278478 0.5936561529970006 0.9150893988222273 1.0 9.19949588724574 MNLRPLGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 MNLRPLGTPR 10 1 Q8IYB7;Q8IYB7-4;Q8IYB7-5;Q8IYB7-3;Q8IYB7-2;C9JGP4 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 MNLRPLGT(1)PR;MNLRPLGT(1)PR 75.819 0.00060074 3887300.0 881.1600000000001 1238.8600000000001 1124.9299999999998 1149.1599999999999 1370.12 1402.92 1044.0 1190.04 1548.88 1803.38 1897.67 True False 970.6147145242924 1343.2630799795481 1201.274514553623 1220.141003268282 1273.8874978574001 1391.495084656644 1083.729991298721 1166.30371863168 1483.7859599752894 1689.5142790332432 1664.268620321264 0.5832079645513767 0.807119153469498 0.7218032593330598 0.7331394634075061 0.7654338261881629 0.8361000548024724 0.6511749233663505 0.700790548106676 0.891554369203251 1.0151692211243555 1.0 10.700672594300093 -8.981702868866691 2.1985513535160033 0.9598370892984351 0.7302258539664871 0.7021793538756338 0.07096238569522226 0.11895319113270883 1.1504410553719484 0.013421884503314822 0.013502791332484746 1.04303079541916e-09 8.981702868866691 -0.22961123533194805 MNS(ph)GAGSGAR ddPTM_A549_MK2206_60min_R1 6 MNSGAGSGAR 10 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 MNS(0.999)GAGS(0.001)GAR;MNS(0.992)GAGS(0.008)GAR;MNS(0.991)GAGS(0.009)GAR;MNS(0.989)GAGS(0.011)GAR;MNS(0.998)GAGS(0.002)GAR;MNS(0.908)GAGS(0.092)GAR 105.13 0.00032728 142247000.0 5785.23 6512.949999999999 5297.860000000001 4905.360000000001 9830.5 7994.140000000001 8448.619999999999 9020.81 11554.0 13467.3 13368.0 True False 6761.6353887062605 6844.43133594134 6049.176211323786 6107.173420209978 8384.446472384605 8840.074588719343 9983.624893291357 10299.537442571987 8937.037447946665 10425.027576553939 10048.356661969148 0.6729095727958766 0.6811493228386318 0.6020065185602544 0.6077783289007153 0.8344097203593417 0.8797532657431546 0.993557974616607 1.0249971999454899 0.8894028893074043 1.03748582253359 1.0 13.294671957621933 -7.019563746728262 2.1115682258329964 0.95425909282124 0.6399913728392457 0.889012979664889 0.05410693566995656 0.08052758993433573 0.7145295303788219 0.00855590057012899 0.017251955787831976 9.559523678663397e-08 7.019563746728262 -0.3142677199819943 MNS(ph)GAGSGAR ddPTM_A549_PD325901_60min_R1 5 MNSGAGSGAR 10 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 MNS(0.994)GAGS(0.006)GAR;MNS(0.999)GAGS(0.001)GAR;MNS(0.994)GAGS(0.006)GAR;MNS(0.999)GAGS(0.001)GAR;MNS(0.989)GAGS(0.011)GAR 109.16 0.00022085 151499000.0 14169.199999999999 14675.4 14048.5 13385.7 14113.0 14325.7 11012.2 14012.9 13360.599999999999 17169.1 19827.9 True False 15607.646753186265 15912.147461320777 15001.915690493239 14212.504287869602 13121.751567206877 14209.036248870696 11431.275297107062 13733.401716592603 12799.100444738046 16085.040095903063 17389.193999414012 0.8975486013734862 0.9150595169538618 0.8627148383644911 0.8173181740538716 0.7545922811401758 0.8171187376108127 0.6573780991512475 0.7897664329384902 0.736037590078606 0.9250020499193409 1.0 14.085903443879026 -10.875793419072982 1.1247608591850182 0.9999674566058822 0.7997594062583171 0.3969452853218789 0.07288151679997079 0.34445785573721127 0.7738525602738989 0.05360845907772362 0.012943798054708836 1.3310874259875943e-11 10.875793419072982 -0.20020805034756506 MNS(ph)LTFK ddPTM_A549_MK2206_60min_R1 1 MNSLTFK 7 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MNS(1)LTFK 78.934 0.016549 5815400.0 1676.6 1758.5 1510.8 1210.5 2156.3 1755.5 1645.1 1629.6 2798.2 1962.8 2501.5 True False 1959.56909106551 1848.0001388392118 1725.0541577293427 1507.0725543414108 1839.1111264333372 1941.265844793411 1943.9933754806834 1860.6007904406938 2164.412167807198 1519.402116776197 1880.3085121121962 1.0421529650282115 0.9828175147509748 0.9174314462851351 0.8015028090515207 0.9780900924430848 1.0324187931334416 1.0338693692860799 0.989518889296861 1.151094170911273 0.8080600108911998 1.0 10.876753676553449 -7.279834291323128 2.6827634472253097 1.0622770569462823 0.934507178286687 0.0 0.10236237240453613 0.2448670032220149 3.495764842451629 0.012298222366783561 0.021524123728833514 5.2500774311479573e-08 7.279834291323128 -0.12776987865959533 MNS(ph)LTFK ddPTM_A549_PD325901_60min_R1 4 MNSLTFK 7 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MNS(0.951)LT(0.049)FK;MNS(0.867)LT(0.133)FK;MNS(0.997)LT(0.003)FK;MNS(0.974)LT(0.026)FK 61.65 0.016492 28552700.0 11436.9 11554.6 11358.7 11142.4 13742.1 11611.5 11664.4 12341.8 11736.7 12951.900000000001 13271.9 True False 12597.965668599214 12528.34669287223 12129.569687411873 11830.64074177356 12776.902303671344 11516.939793780555 12108.295125004595 12095.633117045203 11243.447314473671 12134.114823614924 11639.540437505877 1.0823421883569406 1.0763609405490244 1.0421003949887044 1.0164182001251445 1.0977153584604222 0.98946688278772 1.040272611278385 1.03918476695778 0.9659700376351731 1.0424908860246225 1.0 13.506746477175387 -7.877641575059116 0.7434499627862766 0.9846817097751436 1.0625350106425084 0.20630535055928456 0.03444235847289698 0.36945821297460735 0.4131815001940542 0.006491720578376922 0.011218372545729103 1.3254349706090142e-08 7.877641575059116 0.07785330086736486 MNS(ph)LTFKK ddPTM_A549_MK2206_60min_R1 3 MNSLTFKK 8 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MNS(0.99)LT(0.01)FKK;MNS(0.991)LT(0.009)FKK;MNS(0.994)LT(0.006)FKK 64.22399999999999 0.0039825 119548000.0 15933.0 17718.6 17869.5 16285.1 22541.1 15097.4 15522.099999999999 15048.7 24341.9 22827.5 22644.4 True False 18622.100875549786 18620.40105774038 20403.66380165772 20274.950231065923 19225.334050014604 16694.996847156955 18342.2646486832 17181.899309710905 18828.49851602674 17670.75189561271 17021.17052635354 1.09405524412775 1.0939553792091314 1.1987227182799873 1.191160748884727 1.1294954139756959 0.9808371769325983 1.0776147633492208 1.0094428748662445 1.1061811810694775 1.0381631432605316 1.0 14.055042632466318 -7.100317400710804 7.239970518977332 1.0459759713187935 1.1466148426122538 0.5714955409058788 0.04535398273918737 0.1856023759122852 11.752378047694028 0.007782096635791829 0.01354066630110034 7.937479182589166e-08 7.100317400710804 0.10063887129346027 MNS(ph)LTFKK ddPTM_A549_PD325901_60min_R1 4 MNSLTFKK 8 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MNS(0.993)LT(0.007)FKK;MNS(0.991)LT(0.009)FKK;MNS(0.979)LT(0.021)FKK;MNS(0.974)LT(0.026)FKK 87.363 0.0011345 274715000.0 35593.3 35133.6 37704.4 37520.3 43606.2 41313.7 40854.6 42681.4 42168.7 43555.3 42013.4 True False 39206.70561359743 38094.4317733799 40263.24731897594 39837.843716216106 40543.45094522331 40977.25492471358 42409.34415949495 41830.08599408945 40396.496184604366 40805.210924806015 36846.018144885784 1.0640689981595557 1.033881914284065 1.0927435133059138 1.0811980702925856 1.1003482326312302 1.1121216616564364 1.1509885272469083 1.1352674752969325 1.0963598841469764 1.1074523918528159 1.0 15.169221098923583 -10.481951945545351 0.9103474399279647 1.002623828455789 1.096422690496346 0.0 0.04307402613798751 0.3437107061991427 0.5311883749511167 0.019763235171466758 0.006368092852896137 3.296461853355532e-11 10.481951945545351 0.09379886204055721 MNS(ph)TGGQTPR ddPTM_A549_MK2206_60min_R1 5 MNSTGGQTPR 10 0 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 MNS(0.994)T(0.006)GGQTPR;MNS(0.98)T(0.017)GGQT(0.003)PR;MNS(0.759)T(0.239)GGQT(0.001)PR;MNS(0.972)T(0.027)GGQT(0.001)PR;MNS(0.741)T(0.097)GGQT(0.162)PR 87.21600000000001 0.00025884 131657700.0 5711.67 5935.23 5496.13 4724.16 7566.1 6277.52 5598.889999999999 6005.49 9293.59 9253.43 8852.699999999999 True False 6675.6602590755965 6237.3078555829725 6275.563878687428 5881.579412075601 6453.136712752067 6941.802999719468 6616.135839793966 6856.7865985417775 7188.60670381363 7163.07373621376 6654.330267909502 1.0032054301946747 0.9373306710763035 0.943079712912857 0.8838724823201981 0.9697650181074283 1.0432008512105722 0.9942602145403379 1.0304247493708902 1.0802900388759895 1.0764529934376224 1.0 12.700077756541233 -7.135739855164064 4.09107493051372 1.034826625409652 0.9402060514131272 0.615343699489182 0.03575639653177778 0.13444542704637544 3.8366995494104192 0.005849422840682837 0.010405382723584532 7.315771710997095e-08 7.135739855164064 -0.0946205739965249 MNS(ph)TGGQTPR ddPTM_A549_PD325901_60min_R1 6 MNSTGGQTPR 10 0 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 MNS(0.832)T(0.167)GGQTPR;MNS(0.832)T(0.148)GGQT(0.02)PR;MNS(0.986)T(0.014)GGQTPR;MNS(0.961)T(0.039)GGQTPR;MNS(0.808)T(0.093)GGQT(0.1)PR;MNS(0.892)T(0.038)GGQT(0.07)PR 85.417 0.00029654 151355100.0 10004.44 10493.3 11343.939999999999 10987.19 12993.79 11662.17 12046.740000000002 12274.71 11759.06 13231.86 15055.97 True False 11020.083383920532 11377.60721723955 12113.807985052772 11665.843772581047 12081.151016541986 11567.197154100135 12505.185282929073 12029.88127972628 11264.867601432676 12396.398101436645 13204.181137657413 0.834590442908422 0.86166700521787 0.9174221300634106 0.8834961934376124 0.9149489006998985 0.8760253311817487 0.9470625366737168 0.9110660596299978 0.8531288297239463 0.938823693207523 1.0 13.688707214543923 -10.901822025792177 1.0511143192292751 1.0026485854664144 0.888466697882982 0.40145482217130046 0.03540015260915037 0.2915037362524084 0.5496217463774951 0.02553555971164479 0.005534290920600186 1.2536548183831749e-11 10.901822025792177 -0.1141818875834324 MNSTGGQT(ph)PR ddPTM_A549_MK2206_60min_R1 2 MNSTGGQTPR 10 0 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 MNS(0.067)T(0.049)GGQT(0.884)PR;MNS(0.04)T(0.01)GGQT(0.949)PR 74.944 0.0016734999999999999 42965300.0 2545.4 2247.54 2447.3900000000003 2477.2 3222.4 2582.84 2854.6000000000004 2519.8 3480.6000000000004 3593.1 4514.5 True False 2975.001290944856 2361.9301859804855 2794.4667031276254 3084.1141112057335 2748.3892286874675 2856.154414449568 3373.243869459097 2876.989366563856 2692.2496573760754 2781.416214483673 3393.425056138518 0.8766957400645238 0.696031339106159 0.8234944508565438 0.9088499260140553 0.8099159943773574 0.8416730492641772 0.9940528562306351 0.8478128495454885 0.793372363566994 0.8196486347774927 1.0 11.728526436189183 -10.891799853569895 1.0083109153205754 1.0051787947818518 0.8402014231056694 0.0 0.08755857096056666 0.47583779069728777 0.8133826188233511 0.05895136588821252 0.012424107698315286 1.282921686269183e-11 10.891799853569895 -0.16497737167618243 MNYMQNHQAGAPAPS(ph)LSR ddPTM_A549_PD325901_60min_R1 1 MNYMQNHQAGAPAPSLSR 18 0 Q9HCK8;H0YJG4;Q9HCK8-2;A0A2R8Y840 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 MNYMQNHQAGAPAPS(0.5)LS(0.5)R 102.48 2.1328000000000003e-09 4932200.0 3460.8 3825.4 3556.2 3526.1 5261.1 3647.1 4420.0 3817.9 3985.5 3926.3 4828.0 True False 3812.137868293696 4147.779883242468 3797.5451171678155 3743.899188645869 4891.578485809686 3617.399226792152 4588.205518716804 3741.7489894153905 3818.003294949588 3678.3927479334516 4234.186607213616 0.9003235383625057 0.9795930760765383 0.8968771264587366 0.8842074135956918 1.155258126195028 0.8543315546436551 1.0836096621013491 0.883699594873953 0.9017087930052509 0.8687365695377524 1.0 12.047869137231297 -3.420533781597886 0.8098399667978164 0.9579427230500329 6.05558308363332e-08 0.01521545545958125 0.09236922593841705 149.389180240243 5.841762492509044 0.012915687206600638 235.56421366165867 0.00037972240111416736 3.420533781597886 -0.9579426624942021 MNYMQNHQAGAPAPSLS(ph)R ddPTM_A549_MK2206_60min_R1 2 MNYMQNHQAGAPAPSLSR 18 0 Q9HCK8;H0YJG4;Q9HCK8-2;A0A2R8Y840 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 MNYMQNHQAGAPAPS(0.38)LS(0.62)R;MNYMQNHQAGAPAPS(0.176)LS(0.824)R 121.14 8.5849e-11 13602500.0 3230.0 3481.0 3697.7 3359.1 4953.1 4080.4 3749.0 3766.4 5446.5 4880.3 5583.9 True False 3775.1450340818315 3658.1680314468595 4222.089461898194 4182.079650795727 4224.505551331896 4512.185219649693 4430.144772157977 4300.2987341162425 4212.876446273282 3777.836840484445 4197.263522199996 0.8994300725018782 0.8715602468365937 1.0059147917606053 0.9963824355263948 1.0064904261997876 1.0750302419145297 1.0554840668750567 1.0245481874967528 1.0037197864729501 0.9000713966380389 1.0 12.035233329309811 -5.767235075548945 23.856561365530844 1.011940713390751 0.8854951322090036 0.5541996285596587 0.04205689962633811 24.498734046224012 100847.01398432818 0.0039018724317432664 0.012645040115758463 1.7090899659726784e-06 5.767235075548945 -0.12644558118174742 MPAGS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 MPAGSPTK 8 0 A0A1W2PRJ8;B3KXV3;E9PAP7;Q8IYP9 A0A1W2PRJ8 ZDHHC23 Palmitoyltransferase;Palmitoyltransferase ZDHHC23 1 MPAGS(0.981)PT(0.019)K;MPAGS(0.995)PT(0.005)K 51.445 0.010361 8707600.0 2808.3999999999996 2986.1 2531.3 2706.6 3161.1 2528.9 2789.2 3142.3999999999996 3543.2 3078.5 3367.5 True False 3093.50670056519 3237.7491267188616 2703.089239943451 2873.7805348654088 2939.075241202979 2508.305476854122 2895.344532308806 3079.7223668348893 3394.291625809908 2884.1229846199035 2953.318848341311 1.0474679028654876 1.0963086930276076 0.9152717260656099 0.9730681590575383 0.9951770845378475 0.8493175324644935 0.9803697741389943 1.0428004983493642 1.1493143138663349 0.976570134389563 1.0 11.52812140682594 -8.351028568897588 4.2442068253714 1.0714042247145918 0.9769448305130793 0.105960309374036 0.07388305568956971 0.26282461722739 8.547525546294567 0.013364213893611926 0.01629435772519178 4.456269330608079e-09 8.351028568897588 -0.0944593942015125 MPARAS(ph)PPHSK ddPTM_A549_PD325901_60min_R1 2 MPARASPPHSK 11 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 MPARAS(0.992)PPHS(0.008)K;MPARAS(1)PPHSK 53.001000000000005 0.0065133 11225800.0 2418.6000000000004 2058.4 2388.8 2388.9 2509.5 2735.4 2380.4 2915.8 2525.3 2386.2599999999998 3369.6000000000004 True False 2664.1344915207856 2231.868591955427 2550.918333021339 2536.456927414457 2333.2413773050143 2713.1238093189795 2470.987424604861 2857.642081599151 2419.170422967307 2235.591136358321 2955.1605616543084 0.9015193712619779 0.7552444428623599 0.8632080321190152 0.858314421330305 0.7895480900702256 0.9180969198506642 0.8361601249921915 0.9670006153572359 0.8186257133903572 0.7565041187159149 1.0 11.52902080261463 -14.999999688171835 0.28562883498996167 2.1894059078485255 0.8407230518689394 0.0 0.09332038222650085 26.663093005957997 0.3517040659332829 18.187337083254025 0.021279458225879858 1.0000007180111422e-15 14.999999688171835 -1.348682855979586 MPAVS(ph)LPPK ddPTM_A549_PD325901_60min_R1 1 MPAVSLPPK 9 0 A0A0B4J1W3;Q9BXJ9;Q9BXJ9-4 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 1 MPAVS(1)LPPK 43.70399999999999 0.023056999999999998 2805200.0 1795.3 2063.4 2066.6 2163.5 2381.0 2107.9 2043.4 1796.4 2567.4 2760.4 2745.1 True False 1977.5575343699932 2237.2899595029307 2206.8519034753426 2297.1344813349992 2213.7667740040793 2090.7339612720166 2121.162705191384 1760.5693927514624 2459.501106374 2586.1078729071896 2407.470102622637 0.8214255837344322 0.9293116276150983 0.916668456680419 0.9541694739355471 0.9195407127143376 0.8684361060161968 0.8810754089451174 0.7312943952381974 1.0216123156398418 1.0742014491020881 1.0 11.233302166607922 MPCES(ph)SPPESADTPTSTR ddPTM_A549_MK2206_60min_R1 2 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.582)S(0.416)PPES(0.002)ADTPTSTR;MPCES(0.761)S(0.238)PPESADTPTSTR 145.79 2.9383000000000005e-17 43760000.0 3044.1 2908.11 2944.19 3134.3 4475.5 2947.3999999999996 2638.75 2970.43 4420.9 4134.299999999999 4496.7 True False 3557.8696589004644 3056.120377457891 3361.7204134532385 3902.203640704073 3817.1598786590025 3259.291911674222 3118.1767184667524 3391.4975490603547 3419.5732087266233 3200.3587586039484 3380.0452873935287 1.0526100558978198 0.9041655118812247 0.9945785123031824 1.15448265005739 1.1293221108296299 0.9642746278667692 0.9225251300911674 1.0033881976994625 1.011694494591691 0.9468390173765563 1.0 11.722826861187404 MPCES(ph)SPPESADTPTSTR ddPTM_A549_PD325901_60min_R1 3 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.911)S(0.088)PPESADTPTSTR;MPCES(0.858)S(0.142)PPESADTPTSTR;MPCES(0.5)S(0.5)PPESADTPTSTR 216.26 9.8885e-56 99030000.0 6351.8 6713.8 5924.9 6849.4 6389.9 6903.6 7449.8 7396.9 6425.6 7752.0 7587.299999999999 True False 6996.630060051978 7279.595488083147 6326.999343318038 7272.47188188396 5941.095467958282 6847.379370481286 7733.306215686977 7249.36302674421 6155.554377625916 7262.5373970354 6654.110199857465 1.0514749305176596 1.0939998391128358 0.9508407816049644 1.0929292818203913 0.8928459688097056 1.029045081133156 1.1621848727201165 1.0894564125041837 0.9250755086319086 1.0914362971011464 1.0 12.700030043800115 -8.764187662665567 24.99996056744475 0.9646189905984983 1.0436725774736715 0.0 0.08070134341587125 87.77929139135408 798486.4559416873 0.012684869098689808 0.01380027134416771 1.7211247003658469e-09 8.764187662665567 0.07905358687517317 MPCESS(ph)PPESADTPTSTR ddPTM_A549_MK2206_60min_R1 4 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.167)S(0.83)PPES(0.002)ADTPTSTR;MPCES(0.055)S(0.945)PPESADTPTSTR;MPCES(0.024)S(0.975)PPES(0.001)ADTPTSTR;MPCES(0.028)S(0.971)PPES(0.001)ADTPTSTR 175.7 5.124899999999999e-31 105861000.0 6129.1 7192.799999999999 6557.9 6052.199999999999 8772.4 7412.400000000001 6523.2699999999995 5837.799999999999 10607.6 9463.6 9400.0 True False 7163.542237891932 7558.882797067207 7487.908830403266 7534.989271693577 7481.991580728012 8196.775248047099 7708.463720425437 6665.3260275126895 8204.995536856413 7325.76618724435 7065.72057319794 1.0138445419233042 1.069796451580601 1.0597516209184372 1.0664148395955102 1.058914162146334 1.160076338022697 1.0909663976333261 0.9433328078095745 1.1612397421969998 1.0368038349878748 1.0 12.786620981013108 -3.9952966753831904 1.229834558505598 1.0731351144874859 5.740636537432064e-05 0.039705156985374024 0.06000306045428258 75.62458838066816 7.405272575126193 0.01007998685709628 200.73157361053532 0.00010108886597594085 3.9952966753831904 -1.0730777081221117 MPCESS(ph)PPESADTPTSTR ddPTM_A549_PD325901_60min_R1 3 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.041)S(0.958)PPES(0.001)ADTPTSTR;MPCES(0.049)S(0.95)PPESADTPTSTR;MPCES(0.026)S(0.886)PPES(0.088)ADTPTSTR 188.9 5.8653e-40 87129000.0 7184.9 7417.5 7948.4 7144.599999999999 8854.6 7987.900000000001 8375.1 7771.7 7279.700000000001 7477.800000000001 8860.8 True False 7914.305758756172 8042.598756718516 8487.82622161203 7585.90571543612 8232.683442711681 7922.849190779808 8693.81901353057 7616.6873467192945 6973.759524838667 7005.650431830672 7770.977773239105 1.018444009196712 1.0349532570296098 1.0922468792590725 0.9761841993114023 1.0594141024392774 1.019543411649394 1.1187548423403617 0.9801453007559564 0.8974108186043439 0.9015146660123017 1.0 12.923880419955843 -8.508918366050539 24.410308759534036 0.9508826305319903 1.044280866044701 0.549702400438199 0.044506095721266146 329.313640732409 575819.6729452976 0.007979579047760657 0.0094479673709204 3.0980015731044233e-09 8.508918366050539 0.09339823551271065 MPCESSPPES(ph)ADTPTSTR ddPTM_A549_MK2206_60min_R1 3 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.004)S(0.003)PPES(0.885)ADT(0.104)PT(0.003)S(0.001)T(0.001)R;MPCES(0.024)S(0.024)PPES(0.611)ADT(0.3)PT(0.023)S(0.008)T(0.009)R;MPCES(0.113)S(0.098)PPES(0.413)ADT(0.356)PT(0.013)S(0.003)T(0.004)R 65.71600000000001 0.00077459 6317600.0 626.85 1198.3 831.0799999999999 983.24 1369.2799999999997 1058.1599999999999 761.3 922.93 1408.94 1186.04 1580.1100000000001 True False 732.6469549889154 1259.2883516468737 948.9396408563025 1224.1338441393211 1167.8607258742472 1170.1337888502394 899.6183555731836 1053.7581538545842 1089.81733961485 918.1127402594464 1187.7250781825308 0.6168489395795358 1.060252389024108 0.7989556323155017 1.030654203254261 0.9832752943646856 0.9851890899203629 0.757429789181339 0.8872071266416769 0.9175670023592495 0.7730010564939422 1.0 10.213985219923002 -14.999999698683158 0.01421383597375247 2.07184716493809 7.079542360389096e-07 0.0 0.13757428573263608 8218.960806275205 9.08958164761518 815.2189053574367 536.9945686980154 1.0000006938079087e-15 14.999999698683158 -2.0718464569838537 MPCESSPPES(ph)ADTPTSTR ddPTM_A549_PD325901_60min_R1 3 MPCESSPPESADTPTSTR 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCES(0.071)S(0.071)PPES(0.49)ADT(0.352)PT(0.012)S(0.003)T(0.001)R;MPCES(0.027)S(0.035)PPES(0.541)ADT(0.392)PT(0.004)S(0.001)T(0.001)R;MPCES(0.001)S(0.009)PPES(0.612)ADT(0.377)PT(0.001)STR 89.484 2.2681e-06 6729100.0 913.8900000000001 1330.87 1151.49 1174.13 1240.47 1215.6 1255.17 1337.5900000000001 831.5999999999999 1353.7 1654.33 True False 1006.6674400297405 1443.0270855886718 1229.637035871877 1246.6533434572978 1153.3436665891809 1205.700556630895 1302.9361812053785 1310.9107181309441 796.650743966899 1268.2271509761124 1450.857897661909 0.6938428922997961 0.9946026333207016 0.847524101328921 0.8592525466941376 0.7949390966874295 0.8310259458034515 0.8980453449680291 0.9035417736247685 0.5490894354648516 0.8741222369329827 1.0 10.50269050814816 MPCQSLQPEPINT(ph)PTHTK ddPTM_A549_MK2206_60min_R1 4 MPCQSLQPEPINTPTHTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCQSLQPEPINT(0.97)PT(0.029)HT(0.001)K;MPCQSLQPEPINT(0.985)PT(0.014)HTK;MPCQSLQPEPINT(0.993)PT(0.007)HTK;MPCQSLQPEPINT(0.995)PT(0.005)HTK 122.18 7.275900000000001e-11 29584100.0 10078.699999999999 12083.8 11678.5 9816.8 15696.1 11451.9 11156.2 11568.3 16791.0 16333.8 16764.199999999997 True False 11779.738159442892 12698.813805917129 13334.686908288397 12221.916440692905 13387.224482497948 12663.732456844013 13183.137131808158 13208.141951432917 12987.86530971719 12643.983235683228 12601.186471617533 0.9348118279159789 1.0077474715987647 1.0582088391694682 0.969902038051823 1.0623780953206954 1.0049634996964258 1.0461822116116914 1.048166534253141 1.030685907154108 1.003396248770867 1.0 13.621271957412135 -5.2839553748079915 4.090754507170384 1.0211866286568152 0.9291676999294135 0.4678462185527579 0.027301031055882476 0.13355145403057883 4.6992782218918245 0.0035150105443159762 0.034536265092794796 5.200494305843454e-06 5.2839553748079915 -0.0920189287274017 MPCQSLQPEPINT(ph)PTHTK ddPTM_A549_PD325901_60min_R1 6 MPCQSLQPEPINTPTHTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCQSLQPEPINT(0.977)PT(0.023)HT(0.001)K;MPCQS(0.001)LQPEPINT(0.808)PT(0.183)HT(0.007)K;MPCQSLQPEPINT(0.977)PT(0.022)HT(0.001)K;MPCQSLQPEPINT(0.974)PT(0.025)HT(0.001)K;MPCQSLQPEPINT(0.916)PT(0.081)HT(0.002)K;MPCQSLQPEPINT(0.909)PT(0.09)HT(0.001)K 115.54 1.1787e-15 34160400.0 9825.8 10077.8 11096.8 10125.099999999999 12302.300000000001 11180.599999999999 10642.4 12152.099999999999 10497.8 11950.8 12927.500000000002 True False 10823.307982628354 10927.091574042168 11849.895578479225 10750.504431229485 11438.228888630987 11089.548900516113 11047.402355744738 11909.716832361966 10056.613973082878 11196.224448463709 11337.499454174396 0.9546468360484268 0.963800846757164 1.0451948091707441 0.948225353807732 1.0088846252971155 0.9781300493410837 0.974412603096281 1.0504712155004234 0.8870222233510314 0.9875391389184437 1.0 13.468814860847026 -8.762391983664564 24.999592637032972 0.9466493885523763 0.9896649050416079 0.08871679796567122 0.04178101080333306 37.56669342549238 985866.5769981373 0.008360506762240254 0.009149287731549991 1.7282557733093445e-09 8.762391983664564 0.04301551648923152 MPDEPEEPVVAVS(ph)SPAVPPPTK ddPTM_A549_MK2206_60min_R1 1 MPDEPEEPVVAVSSPAVPPPTK 22 0 O60885;O60885-2;O60885-3;M0QZD9 O60885 BRD4 Bromodomain-containing protein 4 1 MPDEPEEPVVAVS(0.499)S(0.499)PAVPPPT(0.003)K 73.783 5.2399e-05 1024600.0 1014.9 1307.8 1023.9 1048.0 1245.0 1454.1 1073.7 1234.2 1526.7 1934.7 1361.5 True False 1186.1903080772902 1374.3614339345597 1169.1044162689125 1304.7600470465077 1061.8621492415273 1607.9718968465386 1268.7773918020853 1409.15162957898 1180.904887638928 1497.6499262924947 1023.401974511595 1.1590658779443765 1.342934123798672 1.1423706865788021 1.2749243010491427 1.0375807118686544 1.5712026524220084 1.239764455611484 1.3769287774253893 1.1539013183969076 1.463403397288957 1.0 9.999157206604542 -9.463565180012914 1.1602483794507978 1.0350062769302133 1.2657889939530664 0.0 0.18678018451434045 0.3212679688627205 0.8985303807498849 0.0332651254547941 0.02557062722268533 3.4390209381231986e-10 9.463565180012914 0.23078271702285313 MPDEPEEPVVAVS(ph)SPAVPPPTK ddPTM_A549_PD325901_60min_R1 4 MPDEPEEPVVAVSSPAVPPPTK 22 0 O60885;O60885-2;O60885-3;M0QZD9 O60885 BRD4 Bromodomain-containing protein 4 1 MPDEPEEPVVAVS(0.5)S(0.5)PAVPPPTK;MPDEPEEPVVAVS(0.5)S(0.5)PAVPPPTK;MPDEPEEPVVAVS(0.5)S(0.5)PAVPPPTK;MPDEPEEPVVAVS(0.498)S(0.498)PAVPPPT(0.004)K 95.71 2.0067999999999997e-07 20712500.0 5537.110000000001 5993.65 5515.530000000001 6085.97 6168.779999999999 5629.630000000001 4994.02 5727.91 5937.94 6220.08 6893.59 True False 6099.23333099506 6498.7559202165 5889.847033376252 6461.886544659283 5735.506173935691 5583.784159777877 5184.070163932605 5613.662341591532 5688.389031542583 5827.3430872745075 6045.722132067461 1.0088510847436682 1.074934603055287 0.9742172902945004 1.0688361792852537 0.9486883532925975 0.9235925895701703 0.8574774114138461 0.928534626461872 0.9408948852231355 0.9638787493003298 1.0 12.561698957325927 -6.777279522380805 24.970742653723196 0.9542421374805328 1.030690667971642 0.5020449454410845 0.04310467553152565 199.82023925434768 315001.00367112143 0.007204632700060144 0.013646615354767648 1.6700154062248822e-07 6.777279522380805 0.07644853049110933 MPDEPEEPVVAVSS(ph)PAVPPPTK ddPTM_A549_MK2206_60min_R1 1 MPDEPEEPVVAVSSPAVPPPTK 22 0 O60885;O60885-2;O60885-3;M0QZD9 O60885 BRD4 Bromodomain-containing protein 4 1 MPDEPEEPVVAVS(0.12)S(0.88)PAVPPPTK 96.303 2.197e-07 2046800.0 984.87 1613.1 1274.8 1332.5 1647.6 1413.5 1188.9 1202.4 2096.3 1947.4 2023.9 True False 1151.0919782403003 1695.199899892826 1455.585809023938 1658.962559818198 1405.2402225625224 1563.0756317946375 1404.9077406291315 1372.843882195564 1621.491397103219 1507.4809874719615 1521.3097732016288 0.7566453581756744 1.114302905137618 0.9567977769317992 1.0904830752035966 0.9237041970782613 1.0274538817331802 0.9234856472869909 0.902409165035721 1.0658522187041208 0.9909099474852092 1.0 10.57109823309489 -8.783244995612646 24.985147667501053 1.0310968770582811 0.9707357584535974 0.05840988775519962 0.09395350855907515 433.68861758562855 496923.4790568641 0.014961008797616757 0.01593381702030738 1.6472328870102448e-09 8.783244995612646 -0.06036111860468374 MPEANQLHLPNLNSQVDS(ph)PSSEKSPVMTPFK ddPTM_A549_MK2206_60min_R1 3 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.018)QVDS(0.235)PS(0.235)S(0.235)EKS(0.235)PVMT(0.041)PFK;MPEANQLHLPNLNS(0.014)QVDS(0.279)PS(0.232)S(0.232)EKS(0.232)PVMT(0.01)PFK;MPEANQLHLPNLNS(0.001)QVDS(0.258)PS(0.258)S(0.258)EKS(0.213)PVMT(0.011)PFK 89.40299999999999 1.5068e-09 32795200.0 2976.69 3799.3 3338.39 3463.75 4486.0 3610.1 3352.09 3330.15 5190.1 5310.9 5727.3 True False 3479.0824989167313 3992.668141877633 3811.823900994214 4312.368905493648 3826.115342568264 3992.1183858095646 3961.121362844234 3802.2089606566506 4014.5506368866163 4111.16400141976 4305.0533445613355 0.8081392309138119 0.9274375535721653 0.8854301203514171 1.0016992962332405 0.8887498101276436 0.9273098533965651 0.9201097049931802 0.883196712407771 0.9325205324013657 0.9549623831289988 1.0 12.07181539904548 -14.999999999999966 0.12413321863634491 1.307971809217946 0.869048771028708 0.2675976647434455 0.045132763414230184 55.93542749856959 0.4801437286654129 4.2643656463427515 0.14206405728935062 1.0000000000000778e-15 14.999999999999966 -0.43892303818923795 MPEANQLHLPNLNSQVDS(ph)PSSEKSPVMTPFK ddPTM_A549_PD325901_60min_R1 3 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.005)QVDS(0.231)PS(0.203)S(0.203)EKS(0.179)PVMT(0.179)PFK;MPEANQLHLPNLNS(0.039)QVDS(0.228)PS(0.228)S(0.228)EKS(0.228)PVMT(0.047)PFK;MPEANQLHLPNLNS(0.007)QVDS(0.316)PS(0.225)S(0.225)EKS(0.19)PVMT(0.037)PFK 110.29 3.2188e-15 68351000.0 5585.57 4513.290000000001 5677.139999999999 5679.9 6839.0 6494.5 5642.9 6692.8 7493.400000000001 7034.700000000001 8249.400000000001 True False 6152.612954520695 4893.640787692634 6062.42485981612 6030.7345230111705 6358.652233269176 6441.610945244612 5857.6436474133625 6559.30685359997 7178.478457000438 6590.527841450589 7234.776097255175 0.85042202713847 0.6764052849609608 0.8379561134056607 0.8335758345443739 0.8789010396163615 0.8903676988274061 0.8096509924661957 0.906635777724832 0.9922184682016495 0.9109511825737069 1.0 12.820732653405537 -7.942077679843981 0.4725762084029507 1.0102840124789296 0.7750828613238971 0.4903786945807195 0.06056757291604178 0.36812605270564985 0.17870174785023782 0.01710754533112594 0.03162160801038609 1.1426739327647868e-08 7.942077679843981 -0.23520115115503248 MPEANQLHLPNLNSQVDSPS(ph)SEKSPVMTPFK ddPTM_A549_MK2206_60min_R1 2 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNS(0.001)QVDS(0.062)PS(0.3)S(0.3)EKS(0.25)PVMT(0.088)PFK;MPEANQLHLPNLNS(0.001)QVDS(0.207)PS(0.254)S(0.254)EKS(0.254)PVMT(0.029)PFK 81.988 1.5199e-06 25562000.0 2308.0 2875.0 2929.2 3454.1 4228.1 2501.4 2569.2 3061.5 4313.200000000001 4072.8999999999996 4906.1 True False 2697.533974817604 3021.3252198821347 3344.6046060502968 4300.354655060439 3606.1520909302026 2766.0964877050637 3035.9903837365364 3495.4770004505303 3336.2670867650654 3152.8290612480987 3687.77996852834 0.7314791006617709 0.8192802297496715 0.9069425601834396 1.1661093372597702 0.9778653069611656 0.7500709129370625 0.8232569214122856 0.9478540016706716 0.9046817096564602 0.854939581036414 1.0 11.848536864566324 -14.99999999977469 0.014736810439261918 2.069320867319048 9.518639655673164e-08 0.0007764292995426914 0.11847633978724885 7804.998450925746 8.948092546258442 778.9801138504 505.3198989667641 1.0000000005187945e-15 14.99999999977469 -2.0693207721326514 MPEANQLHLPNLNSQVDSPS(ph)SEKSPVMTPFK ddPTM_A549_PD325901_60min_R1 2 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNSQVDS(0.014)PS(0.324)S(0.324)EKS(0.324)PVMT(0.014)PFK;MPEANQLHLPNLNS(0.001)QVDS(0.077)PS(0.302)S(0.302)EKS(0.302)PVMT(0.017)PFK 104.78 8.4624e-15 21612400.0 3450.9 3840.3 4002.8 4590.8 5049.700000000001 4952.4 4953.8 5103.5 5204.1 5758.3 5437.6 True False 3801.232827581691 4163.935558534023 4274.454078791786 4874.363289536728 4695.02649251928 4912.069296362988 5142.319569823375 5001.706688881703 4985.38977474524 5394.719955282373 4768.8096717864 0.7971030695711842 0.8731603576399829 0.8963356420115991 1.0221341645012199 0.9845279672821412 1.0300409608343466 1.078323507068601 1.0488375576138393 1.045415967057815 1.1312508417349998 1.0 12.219413489065708 -5.912983237196308 1.1288347212973358 1.0286757990507593 0.790162611927859 0.8137037469389022 0.040459991393123285 0.17244324558730637 0.32666940924312104 0.004424202974514177 0.036847547192903785 1.2218468198318024e-06 5.912983237196308 -0.23851318712290037 MPEANQLHLPNLNSQVDSPSSEKS(ph)PVMTPFK ddPTM_A549_MK2206_60min_R1 1 MPEANQLHLPNLNSQVDSPSSEKSPVMTPFK 31 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 MPEANQLHLPNLNSQVDS(0.017)PS(0.103)S(0.103)EKS(0.758)PVMT(0.019)PFK 82.965 1.6047e-06 11632000.0 1080.6 1307.5 883.56 1038.1 1428.9 1093.8 961.49 899.98 1707.8 1613.5 1991.0 True False 1262.978861866509 1374.0461652159627 1008.862093992148 1292.43454660208 1218.7107028523835 1209.5451899943225 1136.180287271852 1027.5549210731567 1320.9860267962017 1249.0092293755827 1496.5797511954347 0.8439101630619215 0.9181242523951063 0.6741118160835006 0.863592164446774 0.81433061076692 0.8082063044272546 0.7591845916425746 0.6866021809077456 0.8826699851718743 0.8345757908176306 1.0 10.547453445281247 -9.489110569266417 1.2241163802833146 0.9728236809636769 0.8000554482505144 0.1731603798717014 0.08279675493990911 0.2321091291909216 0.7189614825447035 0.018434276257754872 0.014186770382033888 3.2425705256831424e-10 9.489110569266417 -0.17276823271316244 MPETVPQEEMPGPPLNS(ph)ESGEEAPTGR ddPTM_A549_MK2206_60min_R1 1 MPETVPQEEMPGPPLNSESGEEAPTGR 27 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 MPETVPQEEMPGPPLNS(0.494)ES(0.494)GEEAPT(0.011)GR 44.615 0.008947799999999999 2872200.0 556.26 747.76 471.21 569.07 823.5 528.39 724.87 654.54 866.76 648.6 922.18 True False 650.1430887487176 785.8177900588051 538.0346635316678 708.4921755465233 702.3642408838537 584.303879083105 856.5694961307422 747.3230494446806 670.4402439313011 502.0808095277365 693.1772551267737 0.937917515239034 1.1336462416313537 0.7761862634013688 1.0220938011258731 1.0132534437463614 0.8429357350685762 1.2357149485149885 1.0781124797697008 0.9671988498940083 0.7243180670085778 1.0 9.437080506629766 MPETVPQEEMPGPPLNSES(ph)GEEAPTGR ddPTM_A549_MK2206_60min_R1 1 MPETVPQEEMPGPPLNSESGEEAPTGR 27 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 MPETVPQEEMPGPPLNS(0.173)ES(0.816)GEEAPT(0.01)GR 64.152 0.00015547 1665000.0 1083.7 1294.2 1510.2 1244.2 2199.0 1838.1 1563.7 1306.9 1979.0 2016.3 1757.5 True False 1266.6020660787856 1360.0692520248556 1724.3690687072087 1549.0290558542595 1875.5300129976865 2032.6065219679676 1847.8040491393515 1492.1570772133925 1530.7596598136092 1560.8164296188334 1321.064245467593 0.9587740115019686 1.029525442605145 1.3052878197432898 1.1725614868230558 1.4197114329847291 1.5386129243461002 1.3987238360881669 1.1295113635334524 1.1587321851041348 1.1814841215889387 1.0 10.367484913520643 -9.435360493287405 0.9470482808888828 1.033074897789625 1.2556663937438202 0.09395526391131281 0.1692416839955571 0.54605497113855 1.0353577684859387 0.051268394695363276 0.03760852467972351 3.669775582711756e-10 9.435360493287405 0.22259149595419525 MPETVPQEEMPGPPLNSES(ph)GEEAPTGR ddPTM_A549_PD325901_60min_R1 1 MPETVPQEEMPGPPLNSESGEEAPTGR 27 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 MPETVPQEEMPGPPLNS(0.319)ES(0.662)GEEAPT(0.02)GR 58.21 0.0031812 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 MPFLSIS(ph)SPK ddPTM_A549_MK2206_60min_R1 2 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLS(0.002)IS(0.66)S(0.339)PK;MPFLS(0.001)IS(0.499)S(0.499)PK 182.93 1.3604e-40 79940000.0 10994.0 12416.0 11091.0 11492.0 16462.0 13798.0 10728.0 12221.0 18783.0 17122.0 16312.0 True False 12849.518422506391 13047.921366976203 12663.870574117118 14307.540515895489 14040.46160707953 15258.09520162888 12677.138734518741 13953.364175242828 14528.680490287543 13254.128308254556 12261.280211702628 1.0479752685402564 1.0641565270258464 1.0328342844681295 1.1668879814230029 1.1451056793954342 1.2444128947535167 1.0339164031517036 1.1380022260583533 1.1849236164116714 1.080974260387942 1.0 13.581821999577341 -6.230424651684993 24.597271546370155 1.1084828266221567 1.0499054705575195 0.17905318499683187 0.06641988542543685 1152.4694870184612 914002.3109149439 0.011690099759880281 0.030925512259329588 5.882681674090856e-07 6.230424651684993 -0.05857735606463721 MPFLSIS(ph)SPK ddPTM_A549_PD325901_60min_R1 2 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLSIS(0.608)S(0.391)PK;MPFLS(0.005)IS(0.784)S(0.211)PK 179.94 1.7344e-11 92942000.0 46103.0 49393.0 52194.0 50080.0 58262.0 51340.0 53594.0 51901.0 47441.0 49498.0 52485.0 True False 50783.34262076524 53555.52145474858 55736.198708018936 53173.32786006781 54169.87811298852 50921.904061722766 55633.548997762104 50865.79383945318 45447.21975052151 46372.68783261847 46029.67772982736 1.1032739120799337 1.1634998135136727 1.210875275624659 1.1551966140664796 1.1768467820031312 1.1062841751925896 1.2086451989584843 1.1050651742124191 0.9873460339495617 1.0074519336156211 1.0 15.490276721324642 -8.63151916994187 3.6629326947951797 0.9938825397498265 1.1609922778286832 0.8220021073215483 0.032927846751311086 0.05755136129051915 1.4904786088180446 0.0053090275081675116 0.006019480541875913 2.336042986019047e-09 8.63151916994187 0.16710973807885665 MPFLSISS(ph)PK ddPTM_A549_MK2206_60min_R1 1 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLS(0.001)IS(0.241)S(0.759)PK 99.75200000000001 0.00016573 16592000.0 8233.2 8259.4 8570.1 7341.0 11473.0 9756.2 8007.2 9328.7 12078.0 11773.0 11935.0 True False 9622.762877585918 8679.76818125027 9785.469047627905 9139.545329550017 9785.336898191194 10788.59460835857 9462.004593124393 10651.07179294557 9342.352284602714 9113.471123296393 8971.210110757165 1.0726270769254964 0.9675136435432012 1.0907635566236913 1.0187639367169659 1.0907488262322413 1.2025796381050335 1.054707723518673 1.187250288584159 1.0413703579855431 1.0158575053736225 1.0 13.131086885529884 -8.982868376176189 15.7133689459662 1.01824521998844 1.0846418883278786 0.1881567761599401 0.06320997233951624 2.434308008637013 2232.815255593197 0.01137181609236715 0.011603719834387781 1.040235387455581e-09 8.982868376176189 0.06639666833943858 MPFLSISS(ph)PK ddPTM_A549_PD325901_60min_R1 2 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLS(0.071)IS(0.243)S(0.687)PK;MPFLS(0.087)IS(0.2)S(0.713)PK 51.162 0.009130200000000002 73667000.0 8232.3 7703.0 8295.9 7698.9 10176.8 10414.7 8440.7 8554.7 10273.3 9206.9 11756.1 True False 9068.037035701047 8352.158843680849 8858.909661299278 8174.443567529483 9462.016676054054 10329.886136182786 8761.91545742827 8384.069797467673 9841.548927363092 8625.57476274062 10310.174228057995 0.8795231617932693 0.8100890110034586 0.8592395691229677 0.7928521271040835 0.9177358662188487 1.001911888944723 0.849831948870824 0.8131841045567744 0.9545472956781282 0.8366080506444863 1.0 13.331781092064533 -8.8659033593788 0.28590644041540836 1.024921606634623 0.8266288477193291 0.0 0.07642020074914471 1.010599288652624 0.26759410005655127 0.07116144287820926 0.05895232584645425 1.3617476692760523e-09 8.8659033593788 -0.19829275891529385 MPFLSISSPK ddPTM_A549_MK2206_60min_R1 1 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 57.598 0.007810600000000001 1378700.0 2076.6 2766.8 2667.4 2479.1 3414.0 2343.8 2485.3 2363.6 3821.3 3725.8 4010.3 False True 2427.079312004437 2907.618302041703 3045.6774293932003 3086.4796112910285 2911.8051224984524 2591.8193603114755 2936.846839755725 2698.6475382214185 2955.7816513621765 2884.13919231952 3014.431831350605 0.8051531591334719 0.9645659496433049 1.0103653357550288 1.0239009484942119 0.9659548748839442 0.859803606555674 0.9742621509008819 0.8952425164022698 0.9805435374658479 0.9567770491022489 1.0 11.557670389163185 -8.996929029816433 0.009288434668880767 1.9396862274443587 7.62566314364182e-06 0.037513686769879984 0.06326117134976461 1916.6200989135748 12.317986991736209 1296.0392441041704 1275.0173188148733 1.0070962299219097e-09 8.996929029816433 -1.939678601781215 MPFQT(ph)SPGGK ddPTM_A549_PD325901_60min_R1 2 MPFQTSPGGK 10 0 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 MPFQT(0.683)S(0.317)PGGK;MPFQT(0.679)S(0.321)PGGK 104.22 0.00030876 38359000.0 10475.3 9941.7 10472.6 10024.0 13594.6 12451.2 11125.2 11825.599999999999 12277.8 11967.1 11970.4 True False 11538.744744491722 10779.521949399179 11183.333612859711 10643.159713844247 12639.762194823958 12349.801555382208 11548.575573943037 11589.729130996262 11761.806763199613 11211.49526368193 10498.11668661762 1.0991252134966867 1.0268053091027534 1.0652704619977758 1.0138160997402057 1.204002829472869 1.1763825764220173 1.1000616509306358 1.103981740436374 1.1203730263536573 1.067953005130309 1.0 13.357842917862236 -4.232865534966431 12.757096065879796 1.0768437174517915 1.0914305116732277 0.0 0.062039942826222536 0.0 0.0 0.009405529466882938 0.0 5.849711732349936e-05 4.232865534966431 0.014586794221436161 MPFQTS(ph)PGGK ddPTM_A549_MK2206_60min_R1 2 MPFQTSPGGK 10 0 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 MPFQT(0.056)S(0.944)PGGK;MPFQT(0.155)S(0.845)PGGK 127.42 1.5749000000000002e-06 24102000.0 5062.299999999999 6137.4 6458.0 5489.1 8122.6 6398.0 5710.4 6293.0 9007.4 8296.0 8711.1 True False 5916.692478647819 6449.767445045083 7373.84150821822 6833.92974641506 6927.776299943153 7075.032113351321 6747.90576338514 7185.052021504228 6967.238281862106 6421.927838177771 6547.893455870695 0.9036024361916037 0.9850141100360095 1.1261395069901448 1.0436837117879356 1.05801603930068 1.0805050755686938 1.0305460540649327 1.0973074119069959 1.0640427076001726 0.9807624209920542 1.0 12.676815131834946 -5.49576557249581 5.08078829156368 1.0465501643909523 0.918193417759252 0.5560623093144332 0.03999581851656097 0.10593305020456988 7.278221688188732 0.005479536170663985 0.02963669566711933 3.193261078057395e-06 5.49576557249581 -0.12835674663170027 MPFQTS(ph)PGGK ddPTM_A549_PD325901_60min_R1 3 MPFQTSPGGK 10 0 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 MPFQT(0.234)S(0.766)PGGK;MPFQT(0.139)S(0.861)PGGK;MPFQT(0.335)S(0.665)PGGK 97.45200000000001 0.00018282 42444000.0 13029.4 13347.3 14218.5 14063.0 18125.8 15073.1 14573.3 14161.199999999999 16087.1 14777.4 15850.3 True False 14352.135096262682 14472.12381335343 15183.45291278629 14931.639570609712 16852.706338615346 14950.34967107037 15127.89490631575 13878.743756753518 15411.015131397204 13844.352442073141 13900.813583330155 1.0324672732446216 1.0410990498216874 1.092270810033326 1.074155802543509 1.2123539559457943 1.0755017741550623 1.0882740650847307 0.9984123356201897 1.108641234487029 0.995938285128525 1.0 13.762881702662732 -10.948998207434332 0.9157246801353677 0.993603991425424 1.0835013800712898 0.27361593012502017 0.0514932131738293 0.7983636290933095 1.0395094598091903 0.05269843221190325 0.009188997297293949 1.12460961582288e-11 10.948998207434332 0.08989738864586583 MPIEDS(ph)SPEKGREEAASK ddPTM_A549_MK2206_60min_R1 4 MPIEDSSPEKGREEAASK 18 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.539)S(0.461)PEKGREEAASK;MPIEDS(0.576)S(0.424)PEKGREEAASK;MPIEDS(0.594)S(0.406)PEKGREEAASK;MPIEDS(0.526)S(0.474)PEKGREEAASK 103.95 2.9894e-09 159513300.0 10893.4 11626.199999999999 12192.7 11207.4 14392.3 11345.199999999999 12059.699999999999 11409.900000000001 15875.5 17424.5 17436.199999999997 True False 12731.939601940248 12217.923920484762 13921.808200255859 13953.2135031193 12275.211735364528 12545.74153366573 14250.791386714736 13027.288266353267 12279.724597964108 13488.293348159175 13106.31032536105 0.9714358416574049 0.9322168953105561 1.0622217736838413 1.0646179707891907 0.936587905416193 0.957229092110645 1.0873229027042863 0.9939706861011163 0.9369322328804105 1.0291449701186288 1.0 13.677973976283253 -8.541271258611445 24.517372497089383 0.9699671243939235 1.0024665872149254 0.0 0.05428353528429004 421.5338500497498 561905.523616831 0.009175607956800252 0.010404817990671788 2.8756017642433334e-09 8.541271258611445 0.03249946282100191 MPIEDS(ph)SPEKGREEAASK ddPTM_A549_PD325901_60min_R1 3 MPIEDSSPEKGREEAASK 18 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.554)S(0.446)PEKGREEAASK;MPIEDS(0.559)S(0.441)PEKGREEAASK;MPIEDS(0.5)S(0.5)PEKGREEAASK 56.766000000000005 0.0031301 139408000.0 18572.600000000002 19322.9 17562.8 18037.0 20619.4 20157.0 18206.899999999998 22405.0 17419.6 19578.1 22071.3 True False 20458.07667957451 20951.30859672346 18754.717221695893 19151.104525000876 19171.164477068352 19992.84807503205 18899.77354269796 21958.114698617526 16687.514790290774 18341.935424780553 19356.670021498318 1.0569006268564234 1.0823818649310066 0.9689020477626642 0.989380120843661 0.9904164536449743 1.032866089716215 0.9763959152946808 1.1343952588038095 0.8621066935457871 0.947577005983428 1.0 14.240543162911873 -8.7767431109952 24.99999042725984 0.934883727926777 1.0245086064058073 0.35157192681403204 0.055632295010346014 225.8076234482257 368875.3644655035 0.011362903914272568 0.012117884152848868 1.6720793715034396e-09 8.7767431109952 0.08962487847903033 MPIEDSS(ph)PEKGREEAASK ddPTM_A549_MK2206_60min_R1 2 MPIEDSSPEKGREEAASK 18 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.214)S(0.786)PEKGREEAASK;MPIEDS(0.189)S(0.811)PEKGREEAASK 113.73 2.4021e-10 191112000.0 16435.3 21980.0 16876.8 16714.5 15581.8 11158.5 10694.3 11090.8 17638.4 23787.0 21153.7 True False 19209.176835493832 23098.68811582934 19270.184014539678 20809.55325034242 13289.73786108565 12339.285063587175 12637.315880738603 12662.954864150495 13643.330562736932 18413.500179211027 15900.652477580556 1.2080747543271069 1.4526880672599944 1.2119115263798175 1.3087232287909736 0.8357982717893988 0.7760238192102618 0.7947671266041969 0.7963795751152277 0.8580358939341401 1.158034250806595 1.0 13.956798346748137 -6.757261780770527 24.999619728696256 0.8927062035767773 1.3006281047248915 0.7266482517371518 0.12002336947281732 37.54354396172633 224665.1987209331 0.015183506092310487 0.03073641132658161 1.7487922469879406e-07 6.757261780770527 0.4079219011481142 MPIEDSS(ph)PEKGREEAASK ddPTM_A549_PD325901_60min_R1 4 MPIEDSSPEKGREEAASK 18 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.166)S(0.834)PEKGREEAASK;MPIEDS(0.439)S(0.561)PEKGREEAASK;MPIEDS(0.176)S(0.824)PEKGREEAASK;MPIEDS(0.242)S(0.758)PEKGREEAASK 112.32 3.9435000000000004e-10 286582000.0 19727.4 19345.5 20847.0 20082.4 23124.5 22517.5 23707.9 23846.0 22884.4 24688.7 24893.0 True False 21730.111125455678 20975.813178038163 22261.80278319483 21322.844237560425 21500.31489519418 22334.124945653344 24610.117107960672 23370.37282317488 21922.64825064468 23129.8512686001 21831.318809728342 0.9953641057988872 0.9608129202295853 1.0197186426169846 0.9767089392720821 0.9848381164042797 1.023031413736716 1.1272849488595282 1.0704975282006652 1.00418341382453 1.0594802572482755 1.0 14.414111664380464 -7.260142578019381 24.51177139709015 1.0194901169931876 0.9871982584238418 0.21767170813238723 0.04088057157408296 163.25560315033474 3085775.315212598 0.0067007758211417665 0.011198523869501641 5.493604902871255e-08 7.260142578019381 -0.0322918585693458 MPIVGLGT(ph)WKSPLGK ddPTM_A549_MK2206_60min_R1 1 MPIVGLGTWKSPLGK 15 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 MPIVGLGT(0.649)WKS(0.351)PLGK 110.37 7.858e-07 49628000.0 9021.9 7859.8 5494.6 5927.1 12567.0 8871.7 9346.7 9038.1 12986.0 12951.0 12898.0 True False 10544.576155722243 8259.830248079863 6273.816901680989 7379.239766077634 10718.410947404238 9810.497405442156 11044.874404355554 10319.278353020394 10044.691734380764 10025.360105139864 9695.070633309253 1.0876224170553592 0.8519618433414657 0.6471140994193587 0.7611331619106371 1.1055526414195587 1.0119057175031125 1.1392257799967742 1.064384030124191 1.0360617384127477 1.034067773647346 1.0 13.243035693768139 -6.760273692338909 24.999855998131263 1.0351506052163937 0.824469308594144 0.4885988995026437 0.10612701274776831 21.239750450058366 455497.244667961 0.01528881137244625 0.030480273988835873 1.73670601185449e-07 6.760273692338909 -0.21068129662224966 MPIVGLGT(ph)WKSPLGK ddPTM_A549_PD325901_60min_R1 1 MPIVGLGTWKSPLGK 15 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 MPIVGLGT(0.521)WKS(0.479)PLGK 107.65 1.1568e-06 110850000.0 19484.0 17154.0 15569.0 15921.0 15188.0 16933.0 14354.0 12170.0 20956.0 18540.0 23362.0 True False 21462.001336637306 18599.627781968247 16625.605964002505 16904.404010785554 14121.247275755546 16795.103262118246 14900.249324810196 11927.259802819694 20075.292196453043 17369.381235943798 20488.622103919733 1.04750828180541 0.9078027642673883 0.8114555424799316 0.8250629996026686 0.6892238630851595 0.8197282949010578 0.7272450655410151 0.5821406506657105 0.9798263687343027 0.8477574113010174 1.0 14.322535343367388 -8.951815377695423 24.999032311076803 0.991100198376762 0.7991557054917487 0.18622924321268663 0.12049403459514085 88.66664915649795 46001.918108077785 0.01986486338873488 0.021143286851408087 1.1173381368471905e-09 8.951815377695423 -0.19194449288501325 MPIVGLGTWK ddPTM_A549_MK2206_60min_R1 1 MPIVGLGTWK 10 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 49.368 0.017786 1837300.0 1849.8 1510.4 2009.3 1438.1 2278.4 2206.4 2232.6 2060.0 2776.1 2827.7 2220.4 False True 2162.0010167320643 1587.2729085599926 2294.248953617664 1790.4345645587625 1943.250378178229 2439.8797835102137 2638.2345207575063 2352.0113084854133 2147.31778252075 2188.9206060770584 1669.0134000775201 1.2953766678156367 0.9510246643234075 1.374613860806093 1.0727502634044777 1.1643108306308214 1.4618694993083274 1.5807150024289613 1.4092225433158116 1.2865791145960925 1.3115057110837998 1.0 10.704779822434965 -10.471729993141945 0.9672364930152693 1.0120318156690509 1.2849431633030508 0.0 0.19072956434118613 0.564454367637564 1.0015200118440155 0.09556506526062845 0.03285648244679316 3.374970700208882e-11 10.471729993141945 0.27291134763399993 MPIVGLGTWK ddPTM_A549_PD325901_60min_R1 1 MPIVGLGTWK 10 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 73.721 0.001011 3548100.0 3023.8 2509.7 2660.3 2632.1 2959.3 3117.0 2759.4 2909.5 3698.3 3359.3 3627.5 False True 3330.773949996094 2721.2012267929163 2840.8439556834655 2794.6788390671836 2751.448977030774 3091.616185438056 2864.4104770016193 2851.467740041404 3542.873312184685 3147.1932246982756 3181.340496617104 1.0469718515003004 0.85536308662544 0.8929707331561312 0.8784595179418616 0.8648709498265096 0.9717966966206678 0.9003784662621012 0.8963101381551356 1.1136416601593004 0.9892663888209581 1.0 11.63541907543038 -8.749741453093998 24.999262551877703 1.0536641174891026 0.9095067754982693 0.4349594908417648 0.060166175802681056 122.85844353793897 262556.67328091006 0.01044780433299623 0.011798167634368913 1.779338381639919e-09 8.749741453093998 -0.1441573419908333 MPIVGLGTWKS(ph)PLGK ddPTM_A549_MK2206_60min_R1 2 MPIVGLGTWKSPLGK 15 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 MPIVGLGT(0.013)WKS(0.987)PLGK;MPIVGLGT(0.011)WKS(0.989)PLGK 113.23 3.158e-07 179034000.0 12769.1 11284.900000000001 9544.6 7652.5 18440.4 13405.599999999999 12438.3 12500.3 19169.2 18581.6 18185.4 True False 14924.211905478112 11859.253208294926 10898.167801074587 9527.362843533778 15727.841587850171 14824.17169408291 14698.178106036949 14272.255805563222 14827.406806922205 14384.003654518332 13669.463288492958 1.0917920909185521 0.8675727026004102 0.797263767499104 0.6969814865777483 1.1505822325218846 1.0844735730452557 1.0752564161322975 1.0440977457818479 1.0847102401894602 1.0522727447994888 1.0 13.738668978292216 -6.773519975974314 24.99998755839429 1.0536892659983332 0.8589761610593462 0.5189413530108846 0.09490084421777427 142.87440314432104 295669.1706772377 0.013862620775919524 0.026339273750170186 1.6845349424815934e-07 6.773519975974314 -0.19471310493898708 MPIVGLGTWKS(ph)PLGK ddPTM_A549_PD325901_60min_R1 2 MPIVGLGTWKSPLGK 15 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 1 MPIVGLGT(0.028)WKS(0.972)PLGK;MPIVGLGT(0.007)WKS(0.993)PLGK 96.56200000000001 3.821e-06 175482000.0 20402.4 15655.9 15776.3 16893.6 18362.8 16322.5 15882.1 13665.099999999999 23389.2 18494.9 24150.6 True False 22473.63662854695 16975.277637385832 16846.974588598674 17937.07930385067 17073.060276220967 16189.574971707627 16486.5020065186 13392.538860436438 22406.23326213396 17327.128857640622 21180.22930326699 1.0610667291066793 0.8014680763993166 0.7954103965248419 0.8468784283220167 0.8060847704603225 0.7643720348773764 0.778391100986598 0.6323132138314799 1.0578843572141052 0.8180803243224548 1.0 14.370430587996573 -8.789255561458056 24.999824773170793 1.0273343255427358 0.8083519286993569 0.18797778613421467 0.11475601762393357 117.90876390201022 105970.09219763211 0.016192403899362738 0.01723992820451275 1.6245924797169789e-09 8.789255561458056 -0.21898239684337895 MPKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 MPKSPK 6 1 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 MPKS(1)PK;MPKS(1)PK 50.878 0.021658 12947400.0 4410.0 5442.4 4841.5 3670.5 7061.6 5858.2 4990.200000000001 5044.6 7315.8 7772.4 7018.799999999999 True False 5154.300185851663 5719.3949136301 5528.097501089894 4569.772664775009 6022.847994444955 6478.110835641562 5896.85474580494 5759.68749843957 5658.782980931989 6016.6094418337625 5275.838250974644 0.9769632692775354 1.0840732110340028 1.0478140606506743 0.866169970986279 1.1415907213099852 1.2278827605157934 1.1177095402262514 1.091710402110137 1.0725846229054883 1.1404082452153022 1.0 12.365184619135196 -5.2465125472759695 22.58329009175954 1.055160196825171 0.976963050882562 0.040438758413722464 0.09033894825685022 1727.2754341836087 2613075.1455881856 0.012393412204386117 0.33991314620935 5.668751935986721e-06 5.2465125472759695 -0.07819714594260896 MPKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 MPKSPK 6 1 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 MPKS(1)PK 50.878 0.026545 7272500.0 3421.9 3340.9 3148.3 3159.4 4114.4 3635.3 2699.8 3636.2 3513.7 3807.3 4056.3 True False 3769.28876893036 3622.449367889572 3361.9625702658577 3354.5489624819947 3825.4187379094415 3605.6953220798746 2802.542366387246 3563.6731384562836 3366.031408220891 3566.9064282421186 3557.4008150042623 1.0595625753028461 1.018285415748192 0.9450615056042904 0.9429775099655099 1.0753409404345846 1.0135757845649322 0.7878061855067878 1.0017631759192178 0.9462052726877946 1.0026720669759124 1.0 11.796607817746583 MPPLIADS(ph)PK ddPTM_A549_MK2206_60min_R1 2 MPPLIADSPK 10 0 A0A087WXX9;P54646 A0A087WXX9 PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-2 1 MPPLIADS(1)PK;MPPLIADS(1)PK 131.43 1.1105e-06 6476100.0 3619.0 4098.299999999999 4517.1 3490.6000000000004 5590.799999999999 4512.9 5422.5 4818.0 6874.6 6611.9 6463.4 True False 4229.798723944938 4306.8859647453755 5157.692703123654 4345.79715669899 4768.400726087979 4990.45208257943 6407.698060023106 5500.966254506175 5317.514076480366 5118.267197836019 4858.359399234846 0.8706228535935604 0.8864897820082386 1.0616120132932014 0.8944989037623317 0.9814837343731642 1.0271887426371518 1.3189016154367397 1.1322682828636625 1.0945081743680456 1.0534970300143103 1.0 12.246253502572275 -7.232737921632443 3.2956349645821827 1.075398006347108 0.9366960931047411 0.4297951247537738 0.09311041158047814 0.2551460718461635 5.728254534864857 0.015469569975117428 0.027093566990406194 5.851430867487627e-08 7.232737921632443 -0.13870191324236691 MPPLIADS(ph)PK ddPTM_A549_PD325901_60min_R1 4 MPPLIADSPK 10 0 A0A087WXX9;P54646 A0A087WXX9 PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-2 1 MPPLIADS(1)PK;MPPLIADS(1)PK;MPPLIADS(1)PK;MPPLIADS(1)PK 122.51 3.5796999999999996e-05 9615100.0 11123.800000000001 11117.5 11599.199999999999 12621.8 13163.5 12627.9 12048.3 12797.099999999999 12514.800000000001 13581.5 13527.4 True False 12253.07998709125 12054.410741869642 12386.391463655855 13401.419919812392 12238.941171609707 12525.062569166907 12506.804649582738 12541.851801369254 11988.84647738931 12723.961772166702 11863.61555725382 1.0328284769476788 1.0160823809314323 1.0440654793540063 1.1296235835641442 1.0316366973073736 1.0557542520423848 1.0542152676159209 1.0571694388479014 1.0105558815127755 1.0725197315068793 1.0 13.534256132401543 -8.809606782298777 4.934628127381753 1.0046361226489644 1.053240589412424 0.0 0.03418301942872803 0.15029234672075592 7.85401793208097 0.004860505367112708 0.0052006760361678886 1.5502195791817803e-09 8.809606782298777 0.04860446676345953 MPQDGS(ph)DDEDEEWPTLEK ddPTM_A549_MK2206_60min_R1 4 MPQDGSDDEDEEWPTLEK 18 0 F8WBL2;Q13895 F8WBL2 BYSL Bystin 1 MPQDGS(1)DDEDEEWPTLEK;MPQDGS(1)DDEDEEWPTLEK;MPQDGS(0.999)DDEDEEWPT(0.001)LEK;MPQDGS(1)DDEDEEWPTLEK 101.29 2.3399999999999998e-09 7343500.0 6326.83 7945.16 6146.6 5426.02 9595.0 8096.6 6577.58 6662.9 11055.3 10727.2 11486.099999999999 True False 7394.644227857569 8349.534707477831 7018.280305731517 6755.395143583291 8183.588210419642 8953.376837911894 7772.6411444254045 7607.386479275465 8551.292201686412 8303.918069636042 8633.784369766896 0.8564777519521509 0.9670770487059617 0.8128857526610899 0.7824373246150089 0.9478564508833791 1.037016498728428 0.9002588912971958 0.88111842425836 0.9904454217817452 0.9617935442902704 1.0 13.075777346357368 -7.854607384898093 0.4594438526021025 1.002471825532219 0.8622816621637306 0.24992648391643169 0.06713635614020766 0.8621770965300958 0.39079420649405294 0.022441179930062522 0.04487041267711372 1.39763129027659e-08 7.854607384898093 -0.14019016336848833 MPQDGS(ph)DDEDEEWPTLEK ddPTM_A549_PD325901_60min_R1 4 MPQDGSDDEDEEWPTLEK 18 0 F8WBL2;Q13895 F8WBL2 BYSL Bystin 1 MPQDGS(1)DDEDEEWPTLEK;MPQDGS(1)DDEDEEWPTLEK;MPQDGS(1)DDEDEEWPTLEK;MPQDGS(1)DDEDEEWPTLEK 135.68 1.9444e-13 36000000.0 6416.099999999999 5759.6 5653.6 5973.1 5668.8 6591.299999999999 5979.0 4986.97 7329.299999999999 7206.7 8538.400000000001 True False 7067.457748716822 6244.981705317958 6037.28729385861 6342.044821105657 5270.643044298332 6537.622638138547 6206.534116834337 4887.50097114772 7021.275009327316 6751.66773209688 7488.230929377116 0.9438087333805963 0.8339729055120668 0.8062367935494213 0.846934994515881 0.7038569047892268 0.8730530214407206 0.8288385034288208 0.6526910050241026 0.9376413568900657 0.9016372218983497 1.0 12.870409211507809 -8.969294915374848 18.234680462173024 0.9724913519428052 0.8109801366706558 0.37207300082679784 0.0774404110655163 5.602292106359498 3327.1611453735186 0.012692562766476267 0.013338486660997342 1.0732603483419125e-09 8.969294915374848 -0.1615112152721494 MPQPSSGRES(ph)PRH ddPTM_A549_PD325901_60min_R1 1 MPQPSSGRESPRH 13 2 P56181-2;P56181 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 MPQPS(0.028)S(0.248)GRES(0.724)PRH 51.526 0.0085315 49169000.0 5909.2 6372.2 6861.7 6812.3 6956.2 6782.6 6687.7 6977.3 7573.3 7620.5 8185.5 True False 6509.097633876881 6909.207657237848 7327.376224754066 7233.080299144176 6467.620509587218 6727.364754363867 6942.204083149861 6838.132277914035 7255.020537860176 7139.340329477332 7178.735392159706 0.9067192587967272 0.962454705432349 1.0207057127020867 1.0075702618937346 0.9009414829039198 0.9371239343507763 0.9670511174895547 0.9525538837080326 1.0106265437480513 0.9945122559155196 1.0 12.809514005570074 -8.761847969771754 24.999758980019855 1.0050180922683094 0.9587069405271842 0.24924296832660675 0.034411158503737195 11.067881418554565 677195.0319252228 0.006092019675509426 0.006682734390103524 1.7304220091202605e-09 8.761847969771754 -0.04631115174112521 MPS(ph)LEISAPK ddPTM_A549_MK2206_60min_R1 2 MPSLEISAPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPS(1)LEISAPK;MPS(0.999)LEIS(0.001)APK 137.89 3.6179e-07 9686700.0 4103.6 4022.2 3929.6 3423.6 4836.4 3207.8999999999996 2928.5 3432.7 5135.5 4553.1 4733.6 True False 4796.187356612446 4226.912799794754 4486.876368952358 4262.382153691246 4124.971966740341 3547.3578487683167 3460.5705428820042 3919.295737202853 3972.3174497083346 3524.5515477347153 3558.116479286144 1.347956814942352 1.1879635825308308 1.2610257126412423 1.197932158349801 1.1593133588386413 0.9969763130070475 0.9725849513437766 1.1015085537585243 1.1164101773602675 0.9905666574585656 1.0 11.796898024423397 -6.888302737134713 2.148231366657098 1.0500044022719197 1.2527025256550737 0.7489631729692037 0.05898440664354047 0.1388252080431098 1.2989263999535332 0.009523061017433476 0.020326984490485804 1.2932940003470876e-07 6.888302737134713 0.20269812338315396 MPS(ph)LEISAPK ddPTM_A549_PD325901_60min_R1 2 MPSLEISAPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPS(0.998)LEIS(0.002)APK;MPS(0.999)LEIS(0.001)APK 105.46 0.00031863 7701500.0 3378.8 3673.4 3721.8 3589.6 3833.3 3775.5 4259.6 4115.5 4555.1 5095.4 4655.2 True False 3721.813288658903 3982.970309798421 3974.383729001513 3811.321439426909 3564.0622321670867 3744.7535797630367 4421.701408942556 4033.413123952705 4363.664987786947 4773.675574413595 4082.639911744163 0.9116192877928562 0.9755869721306963 0.9734837788580769 0.9335433743405152 0.8729798143389207 0.9172382724694482 1.083049571974997 0.9879424125429599 1.0688341568489508 1.1692619671604132 1.0 11.995286612340236 -7.74867870017374 24.99986724908379 1.032725755031645 0.9322249148952954 0.5613453357400506 0.05501937577317899 121.66781202336598 238362.7979686708 0.006231988378041766 0.009209622497100759 1.7836978951455433e-08 7.74867870017374 -0.10050084013634975 MPS(ph)PFR ddPTM_A549_PD325901_60min_R1 2 MPSPFR 6 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 MPS(1)PFR;MPS(1)PFR 85.81299999999999 0.039698000000000004 28403000.0 3442.2999999999997 3244.7 3249.4 3751.2999999999997 3922.7000000000003 3780.5 3799.0 3511.7000000000003 4240.3 3728.7 4217.6 True False 3791.759761912677 3518.1422562756416 3469.923824229544 3983.00928117956 3647.183084580344 3749.7128614207804 3943.573023892568 3441.6563886246436 4062.094937040458 3493.269245656076 3698.861937569209 1.0251152451514634 0.9511418148760827 0.9381057965385653 1.076820208054882 0.9860284450025114 1.013747721518092 1.0661584807580506 0.9304635984565582 1.0982012861258497 0.9444173112208013 1.0 11.852865736596964 -6.7246250895309725 0.7558867971498563 1.039111014460719 0.9743103165684349 0.0 0.0594734980729651 1.1818301439437517 1.174256777370451 0.009875603402411465 0.042703021326399734 1.885275876609944e-07 6.7246250895309725 -0.06480069789228404 MPSARPPS(ph)PPLSSWER ddPTM_A549_MK2206_60min_R1 4 MPSARPPSPPLSSWER 16 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 MPS(0.015)ARPPS(0.933)PPLS(0.037)S(0.014)WER;MPS(0.006)ARPPS(0.816)PPLS(0.126)S(0.051)WER;MPS(0.006)ARPPS(0.849)PPLS(0.12)S(0.026)WER;MPSARPPS(0.998)PPLS(0.001)SWER 127.58 1.645e-10 123268000.0 8426.42 8288.18 6740.21 6973.68 11960.2 9169.4 9640.0 8165.699999999999 12787.900000000001 13816.4 14444.399999999998 True False 9848.593689810472 8710.012960320946 7696.07312977819 8682.231913060394 10200.870423581136 10139.699821844886 11391.463217818857 9323.212981407443 9891.461068080074 10695.265644093455 10857.45683484045 0.9070810816587692 0.8022148365694092 0.7088283422948818 0.7996561298959084 0.9395266846327773 0.9338927131911448 1.0491833760982439 0.8586921526125918 0.9110292786372776 0.9850617696930151 1.0 13.40639859674048 -6.778405066780547 5.219710765409739 0.9539975561191698 0.7965845100652571 0.5665877568528026 0.06285050434658383 0.10132833604182256 7.658445530725271 0.00942374751581915 0.01874526313681039 1.66569289482722e-07 6.778405066780547 -0.1574130460539127 MPSARPPS(ph)PPLSSWER ddPTM_A549_PD325901_60min_R1 4 MPSARPPSPPLSSWER 16 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 MPS(0.164)ARPPS(0.817)PPLS(0.013)S(0.005)WER;MPS(0.025)ARPPS(0.935)PPLS(0.029)S(0.011)WER;MPSARPPS(0.996)PPLS(0.003)S(0.001)WER;MPSARPPS(0.987)PPLS(0.006)S(0.006)WER 94.259 1.9321e-06 140332000.0 11572.3 10321.7 9095.5 9527.0 10947.1 11377.699999999999 8815.0 8917.8 12995.2 11319.8 14828.8 True False 12747.111376922998 11191.545883009296 9712.77532568469 10115.46115261315 10178.213461444791 11285.043783464405 9150.459648753083 8739.927483121233 12449.056936025316 10605.065896150845 13004.951607508128 0.9801736878100898 0.8605603635270813 0.7468520928657073 0.7778161317242586 0.7826413944953566 0.8677497713216579 0.7036135100626029 0.6720461364943046 0.9572551526326419 0.8154636953841673 1.0 13.666773410453734 -8.89647545142503 7.880227533618 0.9812303197759275 0.7972811741149475 0.20352444037495676 0.09433833772427755 0.13940282154457645 9.564739505380574 0.014234405833058609 0.015115688256787059 1.2691838832686314e-09 8.89647545142503 -0.18394914566097997 MPSFGMLS(ph)PGK ddPTM_A549_MK2206_60min_R1 6 MPSFGMLSPGK 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 MPS(0.008)FGMLS(0.992)PGK;MPS(0.156)FGMLS(0.844)PGK;MPSFGMLS(1)PGK;MPS(0.005)FGMLS(0.995)PGK;MPSFGMLS(1)PGK;MPSFGMLS(1)PGK 89.189 0.00030260000000000004 23670000.0 16524.4 17993.5 16397.3 15783.8 22037.6 17449.6 16531.8 17055.8 25533.9 22701.5 23398.1 True False 19313.314737207984 18909.292293547558 18722.683704352214 19650.831708561713 18795.898233032185 19296.105089892968 19535.41406891469 19473.511881196864 19750.5124192596 17573.215383123523 17587.706015291766 1.098114485221431 1.075142618207669 1.0645324460207393 1.1173049908541879 1.068695270246725 1.097135980844564 1.1107425864367688 1.107222958142777 1.1229726265658164 0.9991760931098322 1.0 14.102279702257826 -10.843950700651428 1.0594097855580427 0.9993073461162137 1.0966249297900825 0.7967329218359454 0.018656925047021884 0.1987949710160711 0.39148939557247214 0.014506419926926807 0.0034512486919070534 1.4323504846643562e-11 10.843950700651428 0.09731758367386878 MPSFGMLS(ph)PGK ddPTM_A549_PD325901_60min_R1 5 MPSFGMLSPGK 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 MPS(0.002)FGMLS(0.998)PGK;MPSFGMLS(1)PGK;MPS(0.016)FGMLS(0.984)PGK;MPSFGMLS(1)PGK;MPS(0.002)FGMLS(0.998)PGK 131.17 8.6837e-08 31461000.0 23808.399999999998 24206.0 24634.1 27043.1 31500.600000000002 26809.6 26427.3 27844.100000000006 27253.300000000003 28076.3 28612.5 True False 26225.41124118228 26245.924570964376 26305.91816287716 28713.49086766375 29288.10652717048 26591.27150629454 27433.005363073433 27288.72758222612 26107.93857690368 26303.55762646867 25093.343889581523 1.0451142484868579 1.0459317294042023 1.0483225463545767 1.1442672205829558 1.1671663472212874 1.0596942210374336 1.0932383298051924 1.0874886863347095 1.0404328212209057 1.0482284761334504 1.0 14.615017113806687 -9.133386055107291 1.0495230568119696 1.01017022610376 1.0889613103993068 0.26560490150869787 0.039875903303365136 0.32882338617255125 0.7534796654771525 0.010049831874956295 0.00888033442026618 7.35552955580139e-10 9.133386055107291 0.07879108429554682 MPSSENEKAVS(ph)PK ddPTM_A549_MK2206_60min_R1 1 MPSSENEKAVSPK 13 1 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 1 MPS(0.015)S(0.015)ENEKAVS(0.971)PK 43.791000000000004 0.018924 4506200.0 1108.9 1371.4 1368.2 1435.9 1491.1 1193.1 933.93 1079.8 1586.8 1963.8 2480.2 True False 1296.0552099979384 1441.1984022769961 1562.231333469213 1787.695564460001 1271.7611652482262 1319.353050084317 1103.61299201427 1232.8649567488105 1227.392333598906 1520.1762160816663 1864.2978899622888 0.6951974880066807 0.7730515654374038 0.83797302023488 0.9589108983522814 0.6821662847421619 0.7076943321064452 0.591972451375029 0.6613025543754433 0.658367066876707 0.8154148670481072 1.0 10.864416686518114 -10.820898286678773 1.0763541830312122 0.9994159911628159 0.7287415301440857 0.23333307264697645 0.1081245860265898 0.35708719548763806 0.7368553765908755 0.07211922201454836 0.018008619255218808 1.5104338617563124e-11 10.820898286678773 -0.27067446101873016 MPTFS(ph)TPGAK ddPTM_A549_PD325901_60min_R1 2 MPTFSTPGAK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPT(0.062)FS(0.469)T(0.469)PGAK;MPT(0.124)FS(0.462)T(0.414)PGAK 81.865 0.00038605 10043900.0 5156.0 5159.1 5534.0 5385.1 6540.6 6440.700000000001 6047.1 5905.9 6062.7 5907.200000000001 6282.4 True False 5679.433324353416 5593.875462863022 5909.570518645382 5717.725396550547 6081.210819845054 6388.249074607279 6277.2256996000915 5788.102191411076 5807.905802607171 5534.2183838709425 5509.704627414829 1.030805407624587 1.015276832632621 1.0725748326400162 1.0377553395695047 1.1037271924862473 1.1594540010041638 1.1393034879522002 1.050528582351042 1.0541228968443375 1.0044491961209934 1.0 12.427759263352165 -9.749549019377067 0.8855063377395445 1.0078112408081776 1.0769676864936462 0.2988685641436011 0.04254784980345893 0.5154353854904232 0.8422743801092964 0.01656846252819084 0.009716113152212994 1.7801269722917456e-10 9.749549019377067 0.06915644568546853 MPTFST(ph)PGAK ddPTM_A549_MK2206_60min_R1 4 MPTFSTPGAK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPT(0.002)FS(0.181)T(0.818)PGAK;MPT(0.204)FS(0.131)T(0.665)PGAK;MPTFS(0.09)T(0.91)PGAK;MPT(0.122)FS(0.268)T(0.61)PGAK 96.015 0.00057777 15961100.0 8740.2 9476.1 9783.0 8177.5 12509.7 9463.1 9065.9 9256.1 13882.7 12698.7 12392.199999999999 True False 10215.332082626011 9958.393014304384 11170.37650586851 10180.98786710192 10669.539701499387 10464.47896090261 10713.056679089621 10568.180520617392 10738.29061611643 9830.05485036983 9314.874732679089 1.096668755704022 1.0690850172539261 1.1991977161732321 1.0929817264621147 1.1454302937717207 1.1234159622340814 1.1501020664835495 1.1345488612467722 1.1528110601899577 1.0553072513024089 1.0 13.185320652459398 -10.762103862355543 0.9204365962267764 0.9968106070284196 1.1306721039834622 0.5150120127837257 0.036766462305601655 0.2736125186981557 0.39574400304664004 0.025139835448445245 0.005816580818429756 1.7294027197893847e-11 10.762103862355543 0.13386149695504257 MPTFST(ph)PGAK ddPTM_A549_PD325901_60min_R1 4 MPTFSTPGAK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPT(0.239)FS(0.146)T(0.615)PGAK;MPT(0.002)FS(0.195)T(0.803)PGAK;MPTFS(0.013)T(0.987)PGAK;MPT(0.002)FS(0.1)T(0.898)PGAK 110.39 0.00019956 28177400.0 14719.5 14651.2 14351.5 15088.5 18575.3 16008.2 15902.1 15939.199999999999 17424.300000000003 16551.3 17727.300000000003 True False 16213.812804076815 15885.908042390878 15325.479092580268 16020.482376530234 17270.635009306163 15877.834526701788 16507.263117463015 15621.280151939485 16692.01726563547 15506.248093337474 15546.954482613482 1.0428931802822923 1.0218019265545837 0.9857544196015435 1.0304579198740376 1.110869336410569 1.0212826276978129 1.0617682798212003 1.0047807221285123 1.0736519029693268 0.9973817129701169 1.0 13.9243443757798 -6.515035153683219 24.817666777537173 1.0398332572987186 1.0157802342170963 0.06844351492195 0.03477920067210016 712.5036521410511 2254397.045370725 0.005196428736868468 0.011235662372781272 3.0546738446286696e-07 6.515035153683219 -0.02405302308162227 MPTT(ph)PVK ddPTM_A549_MK2206_60min_R1 1 MPTTPVK 7 0 F8WDP1;B0QYI1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-2;Q8WUA7-4;Q8WUA7 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 MPT(0.132)T(0.868)PVK 60.91 0.030126 8710000.0 2079.6 2248.5 2229.6 1947.0 3046.4 2230.1 1909.2 2379.2 3043.0 2730.7 2663.5 True False 2430.5856386614764 2362.939045879994 2545.790806243936 2424.015087404152 2598.2785955416775 2466.0877017794273 2256.076926914912 2716.4588859944147 2353.7653586724678 2113.8329734464837 2002.079441139649 1.2140305667780633 1.180242400638674 1.2715733221828545 1.2107487033702935 1.2977899588553052 1.2317631613936606 1.126866836827753 1.3568187306534238 1.1756603211172418 1.0558187302713729 1.0 10.967283505121895 -10.05410945577405 0.690954188354325 1.0040022608677641 1.2347947418573952 0.6115576746149036 0.06151406231641746 0.2868413340112195 0.27049030509439087 0.03271847857514308 0.012672885050204696 8.828573647459793e-11 10.05410945577405 0.23079248098963112 MQAS(ph)IEK ddPTM_A549_MK2206_60min_R1 6 MQASIEK 7 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK 105.98 0.004217800000000001 1227120000.0 41527.9 43577.399999999994 40485.299999999996 37598.399999999994 56310.8 47860.8 44354.0 45107.7 61223.8 55266.6 60947.8 True False 48536.79426032411 45795.30352587541 46226.72431289365 46810.00968785629 48027.555914465716 52925.39808857222 52412.547672524604 51501.85461153761 47356.707054318606 42781.8366756793 45812.77918629287 1.059459721117427 0.9996185417971174 1.0090355820789112 1.0217675181308754 1.0483440814443212 1.1552540367253563 1.1440595528901327 1.1241809714732807 1.033700812206732 0.9338406758016455 1.0 15.483462464707559 -4.88297698175713 18.763738715159086 1.0405320506316595 4.033501969585714 0.0 0.06538547296645013 2249.6758845581116 355845.112910124 0.00883478059790172 3905.717588608119 1.3092513133954074e-05 4.88297698175713 2.9929699189540546 MQAS(ph)IEK ddPTM_A549_PD325901_60min_R1 7 MQASIEK 7 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK 105.98 0.0045079 1785177900.0 64381.6 60658.3 63001.100000000006 61413.09999999999 69037.20000000001 61195.899999999994 61769.1 62201.1 60289.7 60537.799999999996 66873.4 True False 70917.57263677102 65770.18782132235 67276.73350239062 65206.44770773028 64188.265237410495 60697.54087983601 64119.756901848494 60960.45026468102 57755.933572079346 56715.43297655439 58648.39574540984 1.2091988490976147 1.1214320014281023 1.1471197574514402 1.111819801359762 1.0944590115652777 1.0349394916669403 1.0932908920508175 1.0394222977437901 0.98478283741631 0.9670415065188422 1.0 15.83980402519802 -6.8231180956537765 0.40660812169177396 0.9874272584022395 1.2087112058758356 0.8632942029201729 0.026306271410593437 0.4788530389793969 0.11695768837121387 0.007942975946728416 0.042853636579648746 1.5027332793407266e-07 6.8231180956537765 0.22128394747359603 MQAS(ph)IEKAH ddPTM_A549_MK2206_60min_R1 4 MQASIEKAH 9 1 P06748-3 P06748-3 NPM1 Nucleophosmin 1 MQAS(1)IEKAH;MQAS(1)IEKAH;MQAS(1)IEKAH;MQAS(1)IEKAH 103.44 0.0001815 161985000.0 12359.1 13987.4 14132.099999999999 13265.9 11444.7 7076.41 8263.2 7284.08 13622.2 21987.6 21295.199999999997 True False 14445.013929015713 14699.298914984132 16136.244282795093 16516.046095528884 9761.199790702414 7825.231009259208 9764.516479406713 8316.620646559437 10536.793450183402 17020.585888948583 16007.014122379218 0.9024177662728684 0.9183036138159718 1.0080733458112716 1.031800557509223 0.6098076578226663 0.4888626291844676 0.6100148600328313 0.5195610238721579 0.6582610204267912 1.0633204768122433 1.0 13.966416598547786 -6.748366415916702 24.99737097130013 0.7529206754449052 0.9648687914689092 0.3104195504290338 0.1768045927044283 306.665027806962 586383.5905697716 0.029438325490065125 0.06099077164645981 1.7849809441115626e-07 6.748366415916702 0.2119481160240041 MQAS(ph)IEKAH ddPTM_A549_PD325901_60min_R1 8 MQASIEKAH 9 1 P06748-3 P06748-3 NPM1 Nucleophosmin 1 MQAS(1)IEKAH;MQAS(1)IEKAH;MQAS(1)IEKAH;MQAS(1)IEKAH;MQAS(1)IEKAH;MQAS(1)IEKAH;MQAS(1)IEKAH;MQAS(1)IEKAH 85.845 0.00031277 570068900.0 26967.300000000003 27614.6 27437.300000000003 29556.2 33263.799999999996 37305.399999999994 33785.6 35843.1 32726.8 33466.200000000004 34142.4 True False 29705.00044372301 29941.779255447116 29299.36017188814 31381.819346999557 30927.465441880242 37001.59719096596 35071.32949618971 35128.181252132 31351.406406512655 31353.1384206226 29943.10124650581 0.9920482250377928 0.9999558498951793 0.9785011889944837 1.04804839981836 1.0328744904300553 1.2357302901376601 1.1712657686144763 1.1731644281913272 1.047032708750273 1.0470905522613938 1.0 14.869936030513232 -6.404580935097949 3.076357945015087 1.0624554283748766 0.9910019396217865 0.2075122316498632 0.07368014147968312 0.4798222885484248 8.594257008356532 0.012868924029703297 0.032589374930160654 3.939300080271061e-07 6.404580935097949 -0.0714534887530901 MQAS(ph)IEKGGSLPK ddPTM_A549_MK2206_60min_R1 4 MQASIEKGGSLPK 13 1 P06748;P06748-2 P06748 NPM1 Nucleophosmin 1 MQAS(0.998)IEKGGS(0.002)LPK;MQAS(1)IEKGGSLPK;MQAS(1)IEKGGSLPK;MQAS(1)IEKGGSLPK 110.22 1.5484e-05 55223000.0 15123.600000000002 20015.1 20240.100000000002 18789.5 20560.6 12165.1 13295.099999999999 10797.5 23227.1 30101.600000000002 31957.1 True False 17676.093943479875 21033.78309859581 23110.45052810278 23392.928343492717 17536.162976462118 13452.402807460167 15710.647575438115 12328.078690956925 17966.198936056946 23301.627653530868 24021.270098908903 0.7358517626544135 0.8756315969966638 0.962082788834405 0.9738422759150972 0.7300264683863926 0.5600204632007032 0.6540306782592535 0.51321510645338 0.7479287673832454 0.970041448998539 1.0 14.552024813563616 -5.231679666093423 20.525432675583055 0.8228512967278655 0.7358502970154466 0.0 0.1667063042727687 3845.139158053663 2651510.024587097 0.02597823542423078 2.4437736844148166 5.86570657208228e-06 5.231679666093423 -0.08700099971241892 MQAS(ph)IEKGGSLPK ddPTM_A549_PD325901_60min_R1 6 MQASIEKGGSLPK 13 1 P06748;P06748-2 P06748 NPM1 Nucleophosmin 1 MQAS(0.997)IEKGGS(0.003)LPK;MQAS(1)IEKGGSLPK;MQAS(1)IEKGGSLPK;MQAS(1)IEKGGSLPK;MQAS(1)IEKGGSLPK;MQAS(1)IEKGGSLPK 111.33 1.2412e-05 182072000.0 22545.2 22790.8 25100.9 27401.2 28416.399999999998 39408.40000000001 32211.499999999996 34883.799999999996 30489.5 28382.399999999998 28805.7 True False 24833.97210710096 24711.460700319552 26804.39801797359 29093.70989135963 26420.530095258084 39087.47105621339 33437.32625930914 34188.01524318828 29208.132345092326 26590.330420229322 25262.781514377217 0.9830260414106728 0.9781765593094369 1.0610232290818424 1.151643174161254 1.0458282307600208 1.5472354472910457 1.3235805503158762 1.3532957653032647 1.1561724637672928 1.052549593760948 1.0 14.62472587283464 -6.018564084587446 2.069181956436545 1.1498037319225953 0.9753557562982184 0.1923575212008899 0.1574081495682235 0.5772899231516284 4.741137203664745 0.0262310468725985 0.1069531026245369 9.581553202686417e-07 6.018564084587446 -0.17444797562437697 MQASIEK ddPTM_A549_MK2206_60min_R1 1 MQASIEK 7 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 117.04 0.019545 4128200.0 2935.1 3450.6 3368.8 3327.7 3563.3 2653.6 2523.7 2800.0 4056.0 4000.2 4191.1 False True 3430.473123694606 3626.2208012957544 3846.5464962659576 4142.986649386127 3039.143290274968 2934.4021906828793 2982.223622698076 3196.908574640369 3137.322476101064 3096.552041740443 3150.3342015244552 1.088923556756166 1.151059084315885 1.2209963293432815 1.3150943310653596 0.9647050426600194 0.9314574273621238 0.9466372238396071 1.0147839467613868 0.9958697317201791 0.9829281097357904 1.0 11.62128916892757 -6.77970450113536 24.999862671929222 0.9882939179547725 1.1928768171718969 0.7745812447025373 0.056189549735551486 87.87301593575728 120273.53543124307 0.008296542561614084 0.015700040905590434 1.6607164933386278e-07 6.77970450113536 0.20458289921712436 MQASIEK ddPTM_A549_PD325901_60min_R1 1 MQASIEK 7 0 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 103.56 0.028648000000000003 4764900.0 3586.1 3521.7 3767.5 4280.2 4412.4 4526.8 4126.3 4561.0 4420.9 4954.8 5661.2 False True 3950.1582320527086 3818.486018407226 4023.1852058179406 4544.578232960509 4102.488245953632 4489.935241655758 4283.328604497997 4470.027276964721 4235.104947093874 4641.953082408542 4964.908289303585 0.7956155485415396 0.7690949753560977 0.8103241734566385 0.9153398145845641 0.8262968834272421 0.9043339735658138 0.862720589164963 0.9003242389381014 0.8530076892292248 0.9349524325372095 1.0 12.277551353515653 -14.999999999999998 0.11837588265996406 1.4946271933591913 0.7675031081471831 0.6220892356759946 0.040097988933434935 34.39397165720143 0.28436433015964835 4.117539716329347 0.15798003841030317 1.000000000000004e-15 14.999999999999998 -0.7271240852120081 MQFS(ph)FEEYEK ddPTM_A549_PD325901_60min_R1 1 MQFSFEEYEK 10 0 A0A1W2PR28;Q5JU85-3;Q5JU85;A0A1W2PR18 A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 MQFS(1)FEEYEK 50.354 0.0097028 2750100.0 3634.4 3764.0 4033.0 4121.4 4718.8 4984.2 4988.4 4189.7 4277.9 4530.8 4620.5 True False 4003.3616124961313 4081.2054897591474 4306.703632399136 4375.9695176214755 4387.367766976252 4943.610327706243 5178.23629175722 4106.133146743934 4098.114739797978 4244.724514768835 4052.2077917627407 0.9879457861549196 1.0071560244406401 1.0628042424561075 1.0798976119923742 1.0827104611700364 1.2199794733516702 1.2778802464877173 1.0133076480161782 1.0113288731462773 1.0475090945230991 1.0 11.984492440158332 -8.479876322258326 24.995582304297976 1.005716414868501 1.1035306178151183 0.19901833927637191 0.08037835825484234 533.2844424079445 309977.49325533275 0.014029888299441457 0.016960780668540374 3.3122543394316573e-09 8.479876322258326 0.09781420294661736 MQFS(ph)FEGPEK ddPTM_A549_MK2206_60min_R1 2 MQFSFEGPEK 10 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 MQFS(1)FEGPEK;MQFS(1)FEGPEK 76.52199999999999 0.0014671 2374900.0 1877.9699999999998 2806.3999999999996 2488.3 2102.41 3759.0 2273.0 2292.8 2386.6000000000004 3855.8 3709.4 3457.6 True False 2194.925424041688 2949.233772896426 2841.1783562866854 2617.5005443807718 3206.0560795171887 2513.5273513047136 2709.372081516085 2724.907858655965 2982.4674564473544 2871.443963709814 2598.9824950945936 0.8445325923450673 1.1347647698523975 1.0931887235290043 1.007125115048343 1.2335812517277074 0.9671197693900706 1.042474155416531 1.048451793653496 1.1475519600753614 1.1048338990853048 1.0 11.34373120153289 -5.251358513596546 24.24345688692176 1.0723123876887841 0.8445323992876308 0.4544364467257438 0.07327781151496211 669.8629456565524 1610902.348990681 0.010283207789793249 0.1871304708732586 5.605850175187853e-06 5.251358513596546 -0.22777998840115332 MQFS(ph)FEGPEK ddPTM_A549_PD325901_60min_R1 4 MQFSFEGPEK 10 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 MQFS(1)FEGPEK;MQFS(1)FEGPEK;MQFS(1)FEGPEK;MQFS(1)FEGPEK 82.36200000000001 0.0010525 13003800.0 11642.4 12235.2 11393.599999999999 12213.0 15136.0 14191.099999999999 13716.3 15361.1 13299.8 14316.900000000001 14999.9 True False 12824.327877318115 13266.303243438133 12166.83821128262 12967.36927226455 14072.899576365277 14075.53238664421 14238.28130234736 15054.71080995017 12740.855657300344 13412.928490662567 13155.007392200396 0.974862840816164 1.0084603412160547 0.9248826586366146 0.9857363729003227 1.0697751173221763 1.0699752548211865 1.0823468872232818 1.144409148631578 0.9685175596977922 1.0196063058554488 1.0 13.683324438747881 -6.53488404769835 24.83588285144411 1.0163903363033528 0.9703080657880009 0.179739557553391 0.054415037436351725 389.005680598757 804751.6149451927 0.009313470997008657 0.01939767391792509 2.9182060419517836e-07 6.53488404769835 -0.046082270515351964 MQHLS(ph)EGTK ddPTM_A549_MK2206_60min_R1 2 MQHLSEGTK 9 0 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3;Q5T8D3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 MQHLS(0.969)EGT(0.031)K;MQHLS(0.555)EGT(0.445)K 65.395 0.0020727 11159500.0 3316.7 3882.3999999999996 3702.3 3415.0 5649.7 4081.4 3760.7 4254.6 5443.4 5038.700000000001 5461.8 True False 3876.477874470344 4079.9975769288376 4227.341811067874 4251.675153305177 4818.636614112333 4513.291038985945 4443.97051071072 4857.702579166038 4210.4785913236 3900.4541704708704 4105.484321988564 0.9442193832548125 0.9937920247501075 1.0296816354715213 1.0356086687589159 1.1737072257965269 1.0993321822746245 1.0824473222097715 1.183222781572607 1.0255741493817665 0.9500594484262008 1.0 12.00333671073706 -5.543407106100507 1.8083635797916398 1.0481754493966742 0.9378805761151137 0.21744423224111153 0.06773762237738831 0.7291115938812375 3.5389674062193652 0.010243184073311234 0.11277643418636399 2.8614943576797293e-06 5.543407106100507 -0.11029487328156051 MQHLS(ph)EGTK ddPTM_A549_PD325901_60min_R1 2 MQHLSEGTK 9 0 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3;Q5T8D3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 MQHLS(0.881)EGT(0.119)K;MQHLS(0.987)EGT(0.013)K 67.385 0.0017529 6492300.0 4069.7 4525.7 4359.8 4172.2 5602.5 4320.9 4565.1 4644.3 4042.3 4868.1 5976.8 True False 4482.852948045207 4907.0966219455295 4655.682245607179 4429.907318246307 5208.999727575747 4285.71202298983 4738.827378618571 4551.66579311713 3872.4161884769087 4560.72733520486 5241.69149005682 0.8552302165339023 0.9361666231700211 0.8882022634179699 0.8451293493044336 0.9937631273143245 0.8176200432855641 0.9040645348181684 0.8683582011172104 0.738772244765388 0.8700869449978678 1.0 12.355816728205749 MQIFVK ddPTM_A549_MK2206_60min_R1 4 MQIFVK 6 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;A0A2R8Y422;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 ;;; 119.7 0.023275999999999998 31939900.0 11811.8 14311.800000000001 13382.300000000001 12287.5 16063.0 12549.099999999999 12978.0 12971.5 18674.3 17203.300000000003 16731.1 False True 13805.343069216018 15040.209489359711 15280.111368137003 15297.938051606841 13700.153978527434 13877.03743258159 15335.934610046994 14810.2498485527 14444.600866729299 13317.062581789261 12576.306115131058 1.0977263866538884 1.195916300992724 1.2149920038724955 1.2164094855484855 1.089362317767077 1.1034271355629275 1.2194307668446236 1.1776311512276163 1.14855671725026 1.0589009570757004 1.0 13.618420618782675 -10.453579837119374 0.6085412949162933 0.9869724021830694 1.1678933836292 0.5074833784392543 0.049273536653245596 0.4882138991861779 0.2977156198018711 0.046100309822314355 0.010586342909618254 3.519007260481694e-11 10.453579837119374 0.18092098144613067 MQIFVK ddPTM_A549_PD325901_60min_R1 4 MQIFVK 6 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;A0A2R8Y422;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 ;;; 119.7 0.028183 62192000.0 23617.999999999996 23625.5 23627.2 24342.300000000003 29560.4 28682.7 24742.9 27379.5 31344.600000000002 26804.600000000002 27310.899999999998 False True 26015.681973347353 25616.50379869947 25230.68387389558 25845.868585625576 27484.179481843843 28449.117600918868 25684.504599334414 26833.394393697756 30027.295465782674 25112.152981498337 23951.832438059282 1.0861666655620315 1.0695007935173693 1.0533926345361457 1.0790768786673994 1.1474771106936974 1.1877637201449953 1.0723398581614128 1.1203065345037941 1.2536533705066142 1.0484439153638747 1.0 14.54784841330514 -6.649642009257295 6.103916165075297 1.1255106983641314 1.0692569745071232 0.10213309745924659 0.06458524161644448 0.4730971038412012 23.717456964869623 0.013086348392099828 0.027437331994569134 2.2405672864772943e-07 6.649642009257295 -0.05625372385700822 MQNNSSPS(ph)ISPNTSFTSDGSPSPLGGIKR ddPTM_A549_PD325901_60min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIKR 29 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNS(0.201)S(0.161)PS(0.591)IS(0.018)PNT(0.011)S(0.003)FT(0.011)S(0.002)DGS(0.001)PSPLGGIKR 85.537 3.0737e-07 11204000.0 1088.9 1068.5 1198.3 1121.2 1568.2 1189.3 1267.3 1593.4 1608.1 1624.5 1545.8 True False 1199.4443263941876 1158.546244901076 1279.6238439632734 1190.4539775700487 1458.0550419963022 1179.614735111158 1315.5277949931694 1561.6183870018808 1540.5171493183873 1521.9287927610949 1355.676399633555 0.884757104806429 0.8545890783480747 0.9439006567564067 0.8781254714560446 1.0755184957047423 0.8701300217588894 0.9703848170173663 1.1519108744712179 1.13634577524164 1.1226342755339538 1.0 10.404797132488204 -8.050517523102094 6.526363387160489 1.0725106909467068 0.9212814193221167 0.5987859392889223 0.06924081333487588 0.15194346957716456 15.471500984705003 0.012271279747985423 0.015998109537380206 8.901895195328103e-09 8.050517523102094 -0.1512292716245901 MQNNSSPSIS(ph)PNTSFTSDGSPSPLGGIK ddPTM_A549_MK2206_60min_R1 3 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNS(0.005)S(0.004)PS(0.028)IS(0.315)PNT(0.315)S(0.315)FT(0.015)S(0.004)DGS(0.001)PSPLGGIK;MQNNSS(0.001)PS(0.015)IS(0.301)PNT(0.301)S(0.301)FT(0.066)S(0.015)DGSPSPLGGIK;MQNNS(0.002)S(0.007)PS(0.029)IS(0.401)PNT(0.238)S(0.238)FT(0.066)S(0.019)DGS(0.001)PSPLGGIK 86.73200000000001 9.822799999999999e-09 18675500.0 1745.3600000000001 2110.03 2109.05 2368.16 3108.75 2518.15 2264.3 2443.91 3914.1 3702.2000000000003 3773.9 True False 2039.934098044911 2217.4215143331844 2408.1450035471744 2948.3593063107437 2651.456993136222 2784.6189615873145 2675.694000426061 2790.3417266604797 3027.562599533324 2865.87044871043 2836.7364756586912 0.7191130073410282 0.7816804745031166 0.8489138924996557 1.0393490306942006 0.9346856910706 0.9816276504643333 0.9432296666911099 0.9836450268129193 1.0672695985376375 1.0102702430422177 1.0 11.470016419441137 -4.860498414133289 0.5024047042876002 1.0252775376978054 0.324432599985484 0.8178968696576362 0.04463637153584978 1.6984096852555037 0.21447054685418696 0.009309509630352384 0.7652883267385902 1.3788009877797662e-05 4.860498414133289 -0.7008449377123214 MQNNSSPSIS(ph)PNTSFTSDGSPSPLGGIK ddPTM_A549_PD325901_60min_R1 2 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNS(0.002)S(0.007)PS(0.036)IS(0.76)PNT(0.146)S(0.038)FT(0.009)S(0.002)DGSPSPLGGIK;MQNNS(0.001)S(0.003)PS(0.019)IS(0.845)PNT(0.111)S(0.021)FTSDGSPSPLGGIK 134.63 6.598499999999999e-28 25961000.0 3527.4 3733.2 3449.5 4119.4 4453.4 4218.1 3915.8 4888.9 4639.4 4529.200000000001 4732.1 True False 3885.499051265367 4047.8098656665406 3683.6038135285958 4373.845982163808 4140.608547395956 4183.7491921066 4064.8179118079806 4791.387054232142 4444.422151948091 4243.22553904189 4150.081699253426 0.9362464001526389 0.9753566698204318 0.8875979029982115 1.0539180428545865 0.9977173577428187 1.0081124891732205 0.9794549135115137 1.1545283687051469 1.0709240140375103 1.0224438569017136 1.0 12.0189240225548 -6.273097265402411 24.68577588947252 1.0356721245598892 0.9372959577293111 0.4654367144926248 0.04901761876306237 439.04912734398243 929694.1722171765 0.007299980278257925 0.017096164354669853 5.332154621841601e-07 6.273097265402411 -0.09837616683057815 MQNNSSPSISPNTSFTSDGS(ph)PSPLGGIK ddPTM_A549_MK2206_60min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNS(0.001)S(0.001)PS(0.004)IS(0.03)PNT(0.133)S(0.133)FT(0.133)S(0.133)DGS(0.339)PS(0.094)PLGGIK 49.001000000000005 0.0026329 2553200.0 561.07 731.52 678.29 546.25 654.53 771.43 622.35 525.9 989.73 841.67 1100.6 True False 655.7648991555084 768.7512434254543 774.4817213702908 680.0812745220944 558.249504050648 853.0622105662098 735.4229391711169 600.4479355012032 765.5577352740394 651.5361624347976 827.2906449852812 0.7926656769667394 0.9292396186096502 0.9361664199455199 0.8220584611278834 0.6747924776310993 1.0311517672019452 0.8889535299703543 0.7258004658228501 0.9253794176382351 0.7875541279043345 1.0 9.692250458002743 -9.1880777146947 2.443156937615257 0.9736430149014464 0.855755558658775 0.0 0.11121289384599294 0.28497224884207545 3.521976234868308 0.01888901946499002 0.01777625354762043 6.485183742401332e-10 9.1880777146947 -0.1178874562426715 MQNNSSPSISPNTSFTSDGS(ph)PSPLGGIK ddPTM_A549_PD325901_60min_R1 3 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNS(0.004)S(0.003)PS(0.009)IS(0.03)PNT(0.12)S(0.12)FT(0.12)S(0.12)DGS(0.327)PS(0.148)PLGGIK;MQNNS(0.087)S(0.087)PS(0.087)IS(0.087)PNT(0.087)S(0.087)FT(0.114)S(0.103)DGS(0.254)PS(0.004)PLGGIK;MQNNS(0.001)S(0.001)PS(0.002)IS(0.009)PNT(0.04)S(0.04)FT(0.056)S(0.358)DGS(0.437)PS(0.056)PLGGIK 55.702 0.0011481 4934200.0 1782.25 1642.74 2279.2 2057.22 1930.3899999999999 2391.2 2226.6000000000004 2710.9 2121.25 2226.54 2680.0 True False 1963.1827079768943 1781.1794649965311 2433.880217942999 2184.2898071143923 1794.8060658839706 2371.726859999834 2311.334481442273 2656.8289728400896 2032.1012393455821 2085.955884416306 2350.3769899197373 0.835262903098764 0.7578271369382987 1.035527589140546 0.9293359390780044 0.7636247604454557 1.0090835938964946 0.9833888313896413 1.1303841827224566 0.8645852337990154 0.8874984282787499 1.0 11.19867646182141 -7.289123633621376 24.98300394813429 0.9592682704069387 0.8715236116348144 0.24230255846402937 0.09734771691008189 1092.5285522344427 985924.0843517076 0.015381686350357436 0.024592151595491767 5.138973360392892e-08 7.289123633621376 -0.08774465877212434 MQNNSSPSISPNTSFTSDGS(ph)PSPLGGIKR ddPTM_A549_MK2206_60min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIKR 29 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNSSPSISPNT(0.001)S(0.001)FT(0.027)S(0.126)DGS(0.426)PS(0.418)PLGGIKR 72.87899999999999 1.289e-05 8377000.0 1011.4 1474.0 1446.5 1414.3 2478.3 1840.9 1469.9 1759.2 2759.9 2894.7 2346.9 True False 1182.0995936440752 1549.0203040369636 1651.635450857489 1760.8035634903404 2113.745352984158 2035.7028161094788 1736.9618033062163 2008.5719873240482 2134.7870566546644 2240.7852595435384 1764.0999588551308 0.6700865150584985 0.8780796667793417 0.9362482225380079 0.9981314010307388 1.1982004434464932 1.1539611493617479 0.9846164298045068 1.1385817324249445 1.2101281709910037 1.2702144503182051 1.0 10.784716595023982 -5.476532800659674 0.9335079812687443 1.1046162010090304 0.5425098200586854 0.7206873112195722 0.08870936346433927 0.6725704891229506 0.5456325493155921 0.014111278229501941 0.3520617809717012 3.337852946423337e-06 5.476532800659674 -0.5621063809503449 MQNNSSPSISPNTSFTSDGS(ph)PSPLGGIKR ddPTM_A549_PD325901_60min_R1 2 MQNNSSPSISPNTSFTSDGSPSPLGGIKR 29 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNSSPSISPNTS(0.001)FT(0.013)S(0.053)DGS(0.59)PS(0.343)PLGGIKR;MQNNS(0.009)S(0.007)PS(0.023)IS(0.061)PNT(0.061)S(0.061)FT(0.065)S(0.165)DGS(0.432)PS(0.117)PLGGIKR 98.14399999999999 1.5447e-10 32537000.0 3930.5 3722.8 4293.2 3859.8 4749.6 4894.9 4580.0 4679.200000000001 4787.5 4548.2 5148.1 True False 4329.5214665188305 4036.533421167736 4584.562369108847 4098.211079758186 4416.00448123048 4855.037557298925 4754.294406272168 4585.86968523861 4586.298023979717 4261.025875799333 4514.916336494697 0.9589372523966183 0.8940439025502809 1.015425763718187 0.9077047666712617 0.978092206390471 1.0753327848082102 1.053019381077462 1.0157153186140764 1.0158101905251338 0.9437662978064218 1.0 12.140483538803986 -7.002836460948547 24.959488828068455 1.0167789121122812 0.9452250979507245 0.3992178360871592 0.04210357107107603 76.75887015766325 675454.2539105923 0.005085812968871956 0.009486954345709453 9.934900891848085e-08 7.002836460948547 -0.0715538141615567 MQNNSSPSISPNTSFTSDGSPS(ph)PLGGIKR ddPTM_A549_PD325901_60min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIKR 29 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNSSPSISPNTSFT(0.004)S(0.004)DGS(0.252)PS(0.74)PLGGIKR 106.77 3.5061e-15 30480000.0 2480.2 2709.9 2434.1 2802.5 3674.2 3608.8 2845.4 3695.3 3399.7 3171.9 2980.9 True False 2731.9880781732604 2938.2727833948766 2599.292663432369 2975.6040600607057 3416.136867301886 3579.4111292938287 2953.683254062625 3621.594342593229 3256.8224317752124 2971.6256926801602 2614.2681974819943 1.0450297642776862 1.1239370108334548 0.9942716152596549 1.1382168298289908 1.3067277759000526 1.3691828301095652 1.1298317658867396 1.385318593586331 1.2457874195586023 1.1366950397600233 1.0 11.352191439310799 -6.508182620874321 23.354923893452714 1.1727154429587445 1.0621783457077802 0.2239648406205036 0.1163009368605245 528.6058243982832 840051.399361026 0.020748814097125187 0.04660911677586096 3.1032543949383114e-07 6.508182620874321 -0.11053709725096428 MQNT(ph)DDEERPQLS(ph)DDER ddPTM_A549_PD325901_60min_R1 1 MQNTDDEERPQLSDDER 17 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 2 MQNT(1)DDEERPQLS(1)DDER 41.76 0.041658999999999995 4099300.0 407.72 459.23 299.19 271.09 466.82 424.2 245.13 330.91 540.53 299.2 327.22 True False 449.1114342523998 497.9309237678252 319.4948325756254 287.8346136099399 434.0321736415727 420.7454558430615 254.45855629028296 324.309740456127 517.8134038437088 280.30846093820844 286.97401441848365 1.564989900435644 1.7351080542146609 1.1133232157728326 1.002998874978977 1.5124441650965634 1.466144789087084 0.8866954619773183 1.1301014174168327 1.8043912613237536 0.9767729719578195 1.0 8.164776296129105 -5.7490364548596276 24.973422033319707 1.3135425153403415 1.6500490856340586 0.1999478200521364 0.28321994416270596 356.0564132435303 716909.7566457872 0.0463408530527542 0.17692265032760654 1.7822291601114032e-06 5.7490364548596276 0.3365065702937171 MQNTDDEERPQLS(ph)DDER ddPTM_A549_MK2206_60min_R1 1 MQNTDDEERPQLSDDER 17 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 MQNT(0.004)DDEERPQLS(0.996)DDER 40.381 0.023395 1839500.0 368.91 314.39 365.08 299.84 355.03 372.07 247.88 515.78 564.95 630.73 468.44 True False 431.1729890164481 330.3911081317374 416.85383366681776 373.30081346032887 302.80555730539703 411.44220043992254 292.9165873893089 588.8933945100035 436.9897270397668 488.24765493899037 352.11341971370643 1.224528702618102 0.9383087653982889 1.1838623873118779 1.06017207115778 0.8599659665104492 1.168493381406635 0.8318813512630993 1.6724537082080435 1.2410482037153567 1.3866204115025518 1.0 8.459896401881977 MQS(ph)LSLNK ddPTM_A549_PD325901_60min_R1 1 MQSLSLNK 8 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 MQS(0.999)LS(0.001)LNK 76.465 0.0015456 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 MQS(ph)PHAK ddPTM_A549_PD325901_60min_R1 2 MQSPHAK 7 0 Q9NXE4-3;Q9NXE4-6;Q9NXE4-2;Q9NXE4;Q9NXE4-4;H7C1Q6;Q9NXE4-10;Q9NXE4-8;H7C2E2;H7C2J2;F8WEQ5 Q9NXE4-3 SMPD4 Sphingomyelin phosphodiesterase 4 1 MQS(1)PHAK;MQS(1)PHAK 56.563 0.012223999999999999 3804400.0 1795.0 1663.7 1574.7 1247.9 1380.8 1126.6 1592.8 1403.9 1302.5 1666.6 1836.1 True False 1977.2270785908402 1803.905837755658 1681.5686114403466 1324.9799488134724 1283.817371501399 1117.42534312304 1653.4148756136037 1375.8981131617563 1247.760454565761 1561.3705915762644 1610.2713399968766 1.2278844126944937 1.120249608217679 1.0442765574177133 0.8228302373040077 0.7972677272538983 0.6939360562209393 1.0267927116040025 0.8544510971451713 0.774875900460466 0.9696319823833497 1.0 10.653088095911501 -5.930260000545011 2.233313391070199 0.8736005120582417 1.1920709078310137 0.6045164227705189 0.09806484365487267 0.1840919194823912 1.7839460839249226 0.015782108822148155 0.06800756279950776 1.1741943855556007e-06 5.930260000545011 0.3184703957727719 MQSLS(ph)LNK ddPTM_A549_PD325901_60min_R1 2 MQSLSLNK 8 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 MQS(0.415)LS(0.585)LNK;MQS(0.013)LS(0.987)LNK 73.84100000000001 0.0016294 11436000.0 3487.1 3264.5 3495.5 3898.4 4327.1 3918.8 3615.8 4400.1 5064.2 4494.2 5660.9 True False 3841.1078249326606 3539.610871763748 3732.725650149066 4139.195314091222 4023.179423684607 3886.886592074001 3753.401247641679 4312.336553688326 4851.3692852298855 4210.435445015028 4964.64518740173 0.7736923143429958 0.712963512628426 0.7518615146196591 0.8337343672806331 0.8103659520107934 0.7829132687945864 0.7560260816153186 0.8686092139336158 0.9771834848421206 0.8480838581777036 1.0 12.277474899763723 -8.591011107369264 2.379485665321787 0.9908881984315123 0.7750440992004742 0.635237144010607 0.05259616333131102 0.06062891383865853 0.6852734388505909 0.005867311512457426 0.0067284618156176505 2.5644184489772413e-09 8.591011107369264 -0.2158440992310381 MQVDQEEPHVEEQQQQTPAENKAESEEMET(ph)SQAGSK ddPTM_A549_MK2206_60min_R1 1 MQVDQEEPHVEEQQQQTPAENKAESEEMETSQAGSK 36 1 P34932;A0A087WYC1 P34932 HSPA4 Heat shock 70 kDa protein 4 1 MQVDQEEPHVEEQQQQT(0.027)PAENKAES(0.367)EEMET(0.467)S(0.127)QAGS(0.012)K 49.321999999999996 0.001276 6970000.0 510.0 365.82 319.6 311.53 544.41 419.9 522.11 527.48 897.64 706.66 616.37 True False 596.0755316971314 384.4386754564465 364.92408578918315 387.8548639851133 464.3280101755662 464.3335392929385 616.970628698693 602.2519053397502 694.3259732365281 547.0250152033151 463.3083180534057 1.2865634146210636 0.8297685590271059 0.7876484655453957 0.837142025886108 1.0022008931901865 1.002212827181347 1.3316631812070652 1.2998944371862724 1.498626176524836 1.1806932746246515 1.0 8.855828773951806 -7.641366190635993 4.549607773904138 1.2535910039913296 0.9333234176298604 0.44927062186388256 0.16781370665290854 0.1952283171441749 6.938781371338135 0.03328564130983969 0.049792990765707125 2.2836724327783122e-08 7.641366190635993 -0.32026758636146924 MRDAGDPS(ph)PPNK ddPTM_A549_MK2206_60min_R1 2 MRDAGDPSPPNK 12 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;A0A494C0S5;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 MRDAGDPS(1)PPNK;MRDAGDPS(1)PPNK 51.773999999999994 0.015324 7172100.0 1885.9 2072.3 1757.8 2016.1 2345.2 1995.9 2031.0 1635.7 2619.9 3402.8 3185.9 True False 2204.1938141718024 2177.771218491045 2007.0824718405063 2510.044590506167 2000.224186667655 2207.1048132288056 2400.006410310175 1867.5654841211613 2026.4968331206044 2634.1051166527614 2394.7531036331184 0.9204263315611887 0.9093927951015549 0.8381166596237121 1.0481433708962056 0.8352527797680198 0.9216419053306044 1.0021936736063048 0.7798572142104535 0.846223700491785 1.0999485135467695 1.0 11.225661208045173 -10.985432151593937 1.305550345087526 0.9990922720443528 0.8955493625652181 0.302012818640932 0.07983424957080958 0.5396586911206575 1.6596715928625714 0.04828695063401678 0.01150562890785827 1.0341126443985585e-11 10.985432151593937 -0.10354290947913469 MRDAGDPS(ph)PPNK ddPTM_A549_PD325901_60min_R1 2 MRDAGDPSPPNK 12 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;A0A494C0S5;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 MRDAGDPS(1)PPNK;MRDAGDPS(1)PPNK 43.083999999999996 0.017266 62949000.0 6698.3 7201.9 6933.0 6963.3 8482.6 8008.4 7723.0 8027.5 9218.3 8658.3 9105.2 True False 7378.306484972166 7808.829388070251 7403.515071515801 7393.407226198291 7886.811439381351 7943.182245576558 8016.902991187756 7867.385215048076 8830.886908501765 8111.613460365274 7985.318122618356 0.9239840381653883 0.9778983464605873 0.9271409050749522 0.9258751013634032 0.9876640251866754 0.9947233314446862 1.0039553675989359 0.9852312824912716 1.1058904320277914 1.0158159431856806 1.0 12.963134168163563 -7.633936418157342 0.987095401954743 1.0468944957598436 0.9425001236173309 0.5195632805026689 0.03424546832843716 0.31434906915484173 0.6165365878753518 0.007956780068036346 0.014652191507990367 2.323076875964048e-08 7.633936418157342 -0.10439437214251268 MREDY(ph)DSVEQDGDEPGPQR ddPTM_A549_PD325901_60min_R1 1 MREDYDSVEQDGDEPGPQR 19 1 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 MREDY(0.556)DS(0.444)VEQDGDEPGPQR 66.98899999999999 0.00032184 10451000.0 845.21 1160.2 890.79 881.34 1376.2 1100.6 685.49 1029.5 988.74 1151.4 897.06 True False 931.0150969892842 1257.974125722255 951.2443661554247 935.7783701316332 1279.5404596322614 1091.6370785027661 711.576697064521 1008.9658148728737 947.1866962359699 1078.700407500846 786.7273069318646 1.1834025446760243 1.5989963925724051 1.2091157352414212 1.1894570861929892 1.62640911070229 1.3875672915943524 0.9044769271319418 1.2824848025266984 1.2039580778375116 1.3711236383895697 1.0 9.619719849508737 -7.732684945876793 24.989664869894767 1.1026048866612395 1.373128434312673 0.228466070643915 0.1850113634474095 170.14437188098933 147867.3419268761 0.0255535688143248 0.037898434964107955 1.8506106371390964e-08 7.732684945876793 0.2705235476514336 MREDYDS(ph)VEQDGDEPGPQR ddPTM_A549_MK2206_60min_R1 7 MREDYDSVEQDGDEPGPQR 19 1 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 MREDYDS(1)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR;MREDY(0.001)DS(0.999)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR;MREDY(0.014)DS(0.986)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR;MREDY(0.008)DS(0.992)VEQDGDEPGPQR 226.24 2.403e-75 143768200.0 4248.19 4781.2300000000005 3949.9700000000003 4649.320000000001 5871.970000000001 4465.629999999999 3993.64 4897.4400000000005 6792.93 6584.89 8103.52 True False 4965.180613726344 5024.574184715501 4510.1351412537515 5788.403608715909 5008.210991551622 4938.1800025547145 4719.232693486521 5591.667117780977 5254.342201080176 5097.358775595278 6091.192338225633 0.8151409999922451 0.8248917298479467 0.7404355158759535 0.9502907291878545 0.8222053603729277 0.8107082699662721 0.7747633683918831 0.9179922102755061 0.8626130828452494 0.8368408831234084 1.0 12.572508944989643 -10.750522086367654 0.32116809730785933 1.072289848955765 0.8139664204374152 0.02287558667888745 0.07260089498978649 1.793191356809479 0.23050816533302793 0.16800618678584495 0.023354240256082383 1.776142938926436e-11 10.750522086367654 -0.2583234285183499 MREDYDS(ph)VEQDGDEPGPQR ddPTM_A549_PD325901_60min_R1 7 MREDYDSVEQDGDEPGPQR 19 1 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 1 MREDYDS(1)VEQDGDEPGPQR;MREDY(0.057)DS(0.943)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR;MREDYDS(1)VEQDGDEPGPQR 262.91 2.9479999999999992e-111 270875000.0 7063.99 7692.98 7451.81 7200.280000000001 8907.19 8039.799999999999 6986.3 7563.54 8540.019999999999 7628.2 9174.71 True False 7781.121064565414 8341.294423115658 7957.534637973764 7645.024942577662 8281.57970253734 7974.326534387198 7252.167469550048 7412.679261217659 8181.112658119532 7146.554150163245 8046.278833278541 0.967045913495259 1.0366648479315637 0.98897077802751 0.9501317442491135 1.0292434396239936 0.9910576925828426 0.9013070041216898 0.9212555784867431 1.016757289628509 0.8881812696579527 1.0 12.97410601820331 MRKET(ph)PPPLVPPAAR ddPTM_A549_MK2206_60min_R1 5 MRKETPPPLVPPAAR 15 2 Q9BQA1-2;Q9BQA1 Q9BQA1-2 WDR77 Methylosome protein 50 1 MRKET(1)PPPLVPPAAR;MRKET(1)PPPLVPPAAR;MRKET(1)PPPLVPPAAR;MRKET(1)PPPLVPPAAR;MRKET(1)PPPLVPPAAR 81.51 0.00011557 52307100.0 7450.699999999999 8245.7 8279.1 8459.5 10860.1 7979.5 8101.1 8177.199999999999 13217.599999999999 11670.599999999999 11562.5 True False 8708.19600787414 8665.370909767697 9453.200871893692 10532.077879761391 9262.593676287479 8823.885393636585 9572.965007663108 9336.343141624722 10223.83470416997 9034.203354416288 8691.212141234168 1.0019541424560787 0.9970267402237404 1.0876734704293296 1.211807709743214 1.0657424448705464 1.015265218504214 1.1014533821175063 1.0742279661233702 1.176341635439377 1.0394641400541644 1.0 13.085341684739145 -5.762831128016496 23.163048162863486 1.0885192869646776 0.9994903933618416 0.23506412551233746 0.059866672485270105 17.2879516097332 287807.9686466755 0.010097082608773164 0.03413465408250238 1.726509100929512e-06 5.762831128016496 -0.08902889360283595 MRKET(ph)PPPLVPPAAR ddPTM_A549_PD325901_60min_R1 4 MRKETPPPLVPPAAR 15 2 Q9BQA1-2;Q9BQA1 Q9BQA1-2 WDR77 Methylosome protein 50 1 MRKET(1)PPPLVPPAAR;MRKET(1)PPPLVPPAAR;MRKET(1)PPPLVPPAAR;MRKET(1)PPPLVPPAAR 110.37 9.5754e-07 28363700.0 5722.039999999999 5568.9400000000005 6239.84 6593.66 7207.599999999999 7475.000000000001 6627.41 7431.160000000001 8644.599999999999 8004.570000000001 8190.7 True False 6302.937288456785 6038.254117996632 6663.313065606105 7000.935402911637 6701.363040870137 7414.126078328353 6879.619714207906 7282.939684167757 8281.297524406273 7499.160084131534 7183.295825125218 0.8774436473033481 0.840596609828661 0.9276122309065493 0.9746132657413699 0.9329092388803744 1.0321343097684708 0.9577246826094598 1.0138716073329477 1.1528548630059956 1.0439720522022091 1.0 12.810430215003857 -6.883120639129396 0.6226512777803151 1.0674096493118723 0.8546895327276754 0.6344871191765482 0.04945721198439572 0.5296210603464633 0.3511452804265278 0.013081083956899718 0.05577732547579177 1.308818306513845e-07 6.883120639129396 -0.21272011658419687 MRLES(ph)LSYQLSGLQK ddPTM_A549_MK2206_60min_R1 1 MRLESLSYQLSGLQK 15 1 Q03252 Q03252 LMNB2 Lamin-B2 1 MRLES(0.927)LS(0.067)Y(0.004)QLS(0.001)GLQK 53.453 0.0049471 1797800.0 918.73 1299.1 1160.2 1238.6 1464.8 1209.3 1191.1 1115.3 2292.9 1368.6 2028.0 True False 1073.7891632080489 1365.2186410952634 1324.7338057966533 1542.0570556028667 1249.329860408827 1337.2673233316277 1407.5074521518702 1273.3971904630014 1773.5618110089076 1059.432309466019 1524.3916300473854 0.7044050505411594 0.8955826141952943 0.8690245863889152 1.0115885086268364 0.8195596431935223 0.8772465664155208 0.9233240490228342 0.835347797352717 1.1634554900788696 0.6949869630503591 1.0 10.574017876564087 -8.753071240293073 24.997410402730253 1.0771873167022785 0.8734853994125135 0.0 0.1396445360917025 102.47574544485673 306116.5500604157 0.014776426139622292 0.016619569518930954 1.7657481491873493e-09 8.753071240293073 -0.20370191728976506 MRLES(ph)LSYQLSGLQK ddPTM_A549_PD325901_60min_R1 1 MRLESLSYQLSGLQK 15 1 Q03252 Q03252 LMNB2 Lamin-B2 1 MRLES(0.952)LS(0.047)YQLSGLQK 88.264 1.0444e-05 4342000.0 2271.8 2194.3 2240.3 2872.7 3282.6 3298.5 2679.6 2574.7 2881.4 2848.9 2980.0 True False 2502.4314635892315 2379.22136189652 2392.340230018295 3050.140154624937 3052.041500355226 3271.6381096141913 2781.5736443333826 2523.3455886869237 2760.3047783384145 2669.019967803683 2613.4788917764226 0.9575097283025269 0.9103656315660258 0.915385327023699 1.1670804628353852 1.1678079780781032 1.2518326128092074 1.064318389211364 0.9655121365727833 1.0561802458110507 1.0212517790757851 1.0 11.351755791825799 -6.2279888137556645 24.188539534124725 1.0591137605919523 0.9260147022452082 0.39316253303549054 0.08294935267094997 438.0315135778047 316745.18889536103 0.013111269158520759 0.03468616263214076 5.915768713900332e-07 6.2279888137556645 -0.13309905834674407 MRPNS(ph)NTPVNETATASDSK ddPTM_A549_PD325901_60min_R1 1 MRPNSNTPVNETATASDSK 19 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 MRPNS(0.498)NT(0.498)PVNET(0.004)AT(0.001)ASDSK 51.348 0.0033345999999999996 15061000.0 2462.7 2276.7 2604.3 2006.9 3073.2 2441.8 2619.9 2537.6 3073.2 2876.0 3348.9 True False 2712.7114910560817 2468.5654990793446 2781.0434589281103 2130.8616549994053 2857.3490339644427 2421.9147903762105 2719.601728164289 2486.9855772913106 2944.04409134088 2694.4088691787683 2937.0065304261943 0.9236314127849199 0.8405039190434236 0.946897267717191 0.7255215924529089 0.9728779981806195 0.824620158411688 0.9259774195223334 0.8467756375503938 1.0023961679491618 0.9173996861313678 1.0 11.520130758156997 -8.769073453121894 24.960904118750676 1.0011315362082964 0.8752271513183432 0.25529047070684363 0.06980021969943659 99.62015474965726 325724.1379026603 0.00984698098241052 0.010580265217195465 1.7018706431583154e-09 8.769073453121894 -0.12590438488995326 MRPNSNT(ph)PVNETATASDSK ddPTM_A549_MK2206_60min_R1 1 MRPNSNTPVNETATASDSK 19 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 MRPNS(0.14)NT(0.86)PVNETATASDSK 87.65899999999999 2.622e-06 5441600.0 3062.9 2903.6 2803.2 2242.7 4062.2 2576.6 2332.4 2589.9 3529.5 4929.5 4684.4 True False 3579.842639284593 3051.38083772166 3200.7359114024985 2792.161600678628 3464.6557611637995 2849.254101791344 2756.1668889253847 2957.026256236105 2730.0738854533292 3815.922526313563 3521.134197137063 1.0166731623563976 0.8665903276855093 0.9090070790272431 0.7929722198457695 0.9839601580595296 0.8091864559175262 0.7827497432975852 0.8397936831377746 0.7753393459621837 1.0837197086711958 1.0 11.781824496769339 -5.259040696604642 22.62936601080754 0.8754149436344061 1.0166733456750083 0.128105631986292 0.0967445263426075 83.38756891649456 786471.9735567258 0.01265503851446728 0.1158750430056539 5.507560840691922e-06 5.259040696604642 0.14125840204060225 MRPNSNT(ph)PVNETATASDSK ddPTM_A549_PD325901_60min_R1 1 MRPNSNTPVNETATASDSK 19 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 MRPNS(0.486)NT(0.514)PVNETATASDSK 57.195 0.0018965 10162000.0 3054.2 2732.9 2893.0 3346.0 3110.2 3209.2 2943.5 3594.2 2895.9 3613.7 3522.7 True False 3364.2601356167947 2963.2110741133856 3089.336377022243 3552.674820682649 2891.750281607514 3183.065339206869 3055.5165032450022 3522.510861404646 2774.1953937635226 3385.530365282101 3089.43023223517 1.0889581193690812 0.9591448426946783 0.9999696205429895 1.1499449910258457 0.9360141075318484 1.030308212172817 0.989022659053339 1.1401813915882304 0.8979634383121905 1.0958429583414497 1.0 11.593125078480137 -8.79076804028274 24.999680386069116 0.9518160805035788 1.0315013138049494 0.0 0.08105021668997436 232.9928598208279 198601.516124083 0.012047718877800763 0.01282664429542896 1.61894449633308e-09 8.79076804028274 0.07968523330137056 MRPQT(ph)LK ddPTM_A549_PD325901_60min_R1 2 MRPQTLK 7 1 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 MRPQT(1)LK;MRPQT(1)LK 42.743 0.026998 30531000.0 7068.799999999999 7710.7 7766.8 7530.9 8489.1 6698.1 7714.9 7113.700000000001 8104.9 8780.599999999999 7539.3 True False 7786.4193722244745 8360.507749704002 8293.901753562512 7996.066589085159 7892.854901805139 6643.5528943479785 8008.494741255266 6971.81167291031 7764.279238548971 8226.191417493423 6612.013895560395 1.1776169099482123 1.2644419509338334 1.2543684699651663 1.2093239239037412 1.1937142036414592 1.0047699534946168 1.2112035557929681 1.0544157624338175 1.174268439417869 1.2441279687897902 1.0 12.690874041209284 -14.999999999994332 0.08797581402527392 0.4416178500359487 1.3300980316985795 0.0 0.09502727306365863 80.14217841888555 0.5159200390453997 8.624849361480324 0.718204785821075 1.0000000000130518e-15 14.999999999994332 0.8884801816626309 MRS(ph)PQPARPGSAAVPGAAFAPIPR ddPTM_A549_MK2206_60min_R1 9 MRSPQPARPGSAAVPGAAFAPIPR 24 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 MRS(0.99)PQPARPGS(0.01)AAVPGAAFAPIPR;MRS(0.995)PQPARPGS(0.005)AAVPGAAFAPIPR;MRS(0.993)PQPARPGS(0.007)AAVPGAAFAPIPR;MRS(0.999)PQPARPGS(0.001)AAVPGAAFAPIPR;MRS(0.87)PQPARPGS(0.13)AAVPGAAFAPIPR;MRS(0.999)PQPARPGS(0.001)AAVPGAAFAPIPR;MRS(1)PQPARPGSAAVPGAAFAPIPR;MRS(1)PQPARPGSAAVPGAAFAPIPR;MRS(0.997)PQPARPGS(0.003)AAVPGAAFAPIPR 113.65 5.339e-14 350455200.0 21281.35 21470.079999999998 21396.530000000002 19698.119999999995 28804.780000000002 22992.199999999997 21360.91 22582.89 33412.97 32854.77 33556.71 True False 24873.121600946546 22562.815365873754 24430.87969121035 24524.160284282196 24567.635019461333 25425.219343012843 25241.910846902378 25784.083814700065 25844.985644548928 25432.85463837123 25223.652788918815 0.9861030759142758 0.8945102263612662 0.9685702501401088 0.9722683898922079 0.9739919600484795 1.0079911722453847 1.000723846705961 1.022218472101212 1.0246329451499219 1.0082938760378244 1.0 14.622489595693777 -6.824650752592588 1.0402625337501847 1.0124948489699386 0.9425735560968388 0.5871364036967273 0.022248740216832413 0.25152773759733343 0.5255807837693507 0.0034218364444392186 0.010452222168598584 1.4974393706578784e-07 6.824650752592588 -0.06992129287309978 MRS(ph)PQPARPGSAAVPGAAFAPIPR ddPTM_A549_PD325901_60min_R1 9 MRSPQPARPGSAAVPGAAFAPIPR 24 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 MRS(0.944)PQPARPGS(0.056)AAVPGAAFAPIPR;MRS(0.967)PQPARPGS(0.033)AAVPGAAFAPIPR;MRS(1)PQPARPGSAAVPGAAFAPIPR;MRS(0.998)PQPARPGS(0.002)AAVPGAAFAPIPR;MRS(0.986)PQPARPGS(0.014)AAVPGAAFAPIPR;MRS(0.996)PQPARPGS(0.004)AAVPGAAFAPIPR;MRS(0.996)PQPARPGS(0.004)AAVPGAAFAPIPR;MRS(0.986)PQPARPGS(0.014)AAVPGAAFAPIPR;MRS(0.998)PQPARPGS(0.002)AAVPGAAFAPIPR 115.72 2.0198999999999998e-16 733192000.0 32566.100000000002 33583.9 32629.5 35084.6 35744.8 38130.0 34261.700000000004 38067.6 36765.00000000001 38402.8 40880.1 True False 35872.1864981043 36414.133115707315 34843.934087123154 37251.69605909216 33234.20856086561 37819.48192196123 35565.54774222164 37308.311854545536 35219.894903731445 35978.04065413714 35852.106860305146 1.0005600685582412 1.0156762406625657 0.9718796784492957 1.0390378508086122 0.9269806287914971 1.054874740536778 0.9920071888885064 1.040616999160311 0.9823661142415685 1.0035125911657767 1.0 15.1297702813944 -5.652352819980319 19.629625431861037 0.996770638636597 1.0081143860118091 0.0 0.03434599115728122 9.304838488845677 1638.0593894030308 0.00413224210987293 0.01600411171609144 2.226625508125287e-06 5.652352819980319 0.011343747375212154 MRS(ph)VLISLK ddPTM_A549_MK2206_60min_R1 3 MRSVLISLK 9 1 P09496-2;P09496-4;P09496-3;P09496;P09496-5;C9J8P9 P09496-2 CLTA Clathrin light chain A 1 MRS(0.999)VLIS(0.001)LK;MRS(0.999)VLIS(0.001)LK;MRS(0.999)VLIS(0.001)LK 47.938 0.0075915999999999996 9639000.0 1835.3899999999999 2564.85 2421.19 2374.67 3185.23 2699.23 2813.2400000000002 2591.44 3377.34 2863.7499999999995 3056.37 True False 2145.1589610227406 2695.389909639894 2764.551149161176 2956.4642566029884 2716.686886448667 2984.860726996136 3324.3692928316095 2958.7845559521556 2612.377882503738 2216.8268860392454 2297.388977479253 0.9337378136881538 1.1732405509307078 1.2033448302666203 1.286880143321175 1.1825106297103756 1.2992404665714 1.4470206505818544 1.2878901156732288 1.1371073458226904 0.9649331949314034 1.0 11.165779428870527 -9.45266982951572 1.2934826182880304 1.0340579233508256 1.2306680918257678 0.3442484506640169 0.12206600150301776 0.34055629684283917 1.1763643473442846 0.03099796905917512 0.024569178800160095 3.5263886131549616e-10 9.45266982951572 0.19661016847494217 MRS(ph)VLISLK ddPTM_A549_PD325901_60min_R1 5 MRSVLISLK 9 1 P09496-2;P09496-4;P09496-3;P09496;P09496-5;C9J8P9 P09496-2 CLTA Clathrin light chain A 1 MRS(0.999)VLIS(0.001)LK;MRS(1)VLISLK;MRS(0.999)VLIS(0.001)LK;MRS(1)VLISLK;MRS(1)VLISLK 88.101 0.00031458 17785400.0 6722.9400000000005 6858.789999999999 7433.950000000001 7045.6 7326.52 8038.66 7292.420000000001 6902.41 8199.66 7011.75 7840.860000000001 True False 7405.44791963315 7436.804304225599 7938.462550972861 7480.790710281429 6811.9305103218685 7973.195818169233 7569.937033665339 6764.736017714103 7855.056805285748 6569.0269083672565 6876.48392730674 1.0769236135673752 1.08148355799885 1.15443628384689 1.087880200021259 0.9906124383235264 1.1594873052065773 1.1008441397797608 0.9837492662276308 1.1423071570185839 0.9552886297430927 1.0 12.747455361612847 -11.049414565876665 1.3269509252835787 0.9995874839083801 1.0917745497388558 0.3301859825148865 0.05707257591195437 0.4828695056738035 1.5047381087905625 0.0400929828015938 0.008764884985784193 8.924531651172337e-12 11.049414565876665 0.09218706583047565 MS(ph)ADMSEIEAR ddPTM_A549_MK2206_60min_R1 10 MSADMSEIEAR 11 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 MS(0.998)ADMS(0.002)EIEAR;MS(0.989)ADMS(0.011)EIEAR;MS(0.997)ADMS(0.003)EIEAR;MS(0.995)ADMS(0.005)EIEAR;MS(0.984)ADMS(0.016)EIEAR;MS(0.998)ADMS(0.002)EIEAR;MS(1)ADMSEIEAR;MS(0.891)ADMS(0.109)EIEAR;MS(0.834)ADMS(0.166)EIEAR;MS(0.998)ADMS(0.002)EIEAR 88.803 0.0003037 62147400.0 13363.279999999999 15317.61 12761.130000000001 11827.990000000002 16909.27 13013.949999999999 10955.91 11860.450000000003 17390.829999999998 19728.210000000003 19152.13 True False 15618.674963171832 16097.21092219785 14570.85012167371 14725.848080978652 14421.93878257453 14391.077551039132 12946.457031403916 13541.705108604774 13451.834772448865 15271.593659163102 14396.127549102284 1.0849219632084868 1.1181625660993564 1.0121367758083195 1.0229034183499526 1.0017929289237129 0.9996492113559061 0.8993013563714384 0.9406491476556283 0.934406473308004 1.0608126113828027 1.0 13.81339316920051 -6.150606017850204 0.8729255015029035 0.9626357548846599 1.1155651597909915 0.5089530742051387 0.04381517611184513 0.416379764958058 0.4643342141141574 0.0059973779356376905 0.04525817946351232 7.069586003303862e-07 6.150606017850204 0.15292940490633156 MS(ph)ADMSEIEAR ddPTM_A549_PD325901_60min_R1 5 MSADMSEIEAR 11 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 MS(0.967)ADMS(0.033)EIEAR;MS(0.999)ADMS(0.001)EIEAR;MS(0.999)ADMS(0.001)EIEAR;MS(0.999)ADMS(0.001)EIEAR;MS(1)ADMSEIEAR 99.73200000000001 0.00027251 26448100.0 13130.57 12684.25 12774.64 12449.04 13090.02 12550.46 11524.130000000001 13515.16 10516.95 13605.439999999999 15375.23 True False 14463.575800185261 13753.19626287924 13641.603890550778 13217.988926978816 12170.622153317458 12448.253214851746 11962.687073395913 13245.589531362084 10074.959165178789 12746.390196481081 13484.174181613289 1.0726334149485743 1.0199509497313364 1.0116751464952267 0.9802594322018299 0.902585652587686 0.9231750530059081 0.8871649766811792 0.9823063209479648 0.7471691650881203 0.9452851932053626 1.0 13.718979548095652 -6.394100526849831 0.8712274234451257 0.8869786224143188 1.0649111504294397 0.38889559108681715 0.0650760662915677 0.7072709632164806 0.8787199259051308 0.014991546631319172 0.08249456591259105 4.0355197132486793e-07 6.394100526849831 0.17793252801512094 MS(ph)CTRYR ddPTM_A549_PD325901_60min_R1 1 MSCTRYR 7 1 S4R468 S4R468 MCU 1 MS(0.498)CT(0.498)RY(0.004)R 45.68 0.05719199999999999 5963800.0 1946.1 2173.8 1839.4 2101.6 2162.1 1869.1 1933.1 1824.9 1659.8 2188.1 2172.5 True False 2143.666639356901 2356.993754951762 1964.2327452107552 2231.411058920098 2010.2415548400743 1853.8786692981291 2006.6651783329085 1788.5009378936454 1590.0443781099802 2049.942992576517 1905.2962726121737 1.125109343975108 1.2370746685607632 1.0309329700822745 1.171162244421346 1.0550808206243012 0.9730133291849931 1.0532037495574151 0.9386996466652396 0.8345391742828631 1.0759182296441654 1.0 10.895799638178037 -7.280783904349608 0.8951304650348303 0.9237531976778661 1.1536335579702302 0.4255610505063031 0.08025940686749382 0.29553713275616067 0.4665196218232072 0.013850567909857557 0.033079052081320705 5.238610337985459e-08 7.280783904349608 0.22988036029236403 MS(ph)DDEDDDEEEYGKEEHEK ddPTM_A549_MK2206_60min_R1 1 MSDDEDDDEEEYGKEEHEK 19 1 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 MS(1)DDEDDDEEEYGKEEHEK 58.073 0.0012500999999999999 4515400.0 1185.3 1601.2 1003.9 1131.2 1643.9 1577.1 1304.2 1547.0 1978.9 1755.3 1516.2 True False 1385.3496621972736 1682.6942407218346 1146.2681155311664 1408.344050781497 1402.0844876611625 1743.987675205747 1541.1562581617577 1766.2919874888034 1530.6823096539429 1358.7765108912051 1139.6856950087986 1.2155541376577323 1.476454647181339 1.0057756454706726 1.2357302166283874 1.2302378575088968 1.5302356455323265 1.3522642820833684 1.5498062274749946 1.3430740741570208 1.192237927388143 1.0 10.154420294339314 -10.557807797664708 0.9571815539120713 1.0084403703742983 1.326567449670025 0.2081883465912755 0.15937312133536236 0.4387591962261657 0.7454099870448341 0.08948462136944026 0.027752795713564548 2.7681664602905578e-11 10.557807797664708 0.3181270792957267 MS(ph)DDEDDDEEEYGKEEHEK ddPTM_A549_PD325901_60min_R1 2 MSDDEDDDEEEYGKEEHEK 19 1 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 MS(1)DDEDDDEEEYGKEEHEK;MS(1)DDEDDDEEEYGKEEHEK 162.65 2.4754e-27 32007600.0 6803.9 6420.5 7876.7 7134.1 7795.7 6692.5 6078.3 6879.0 6391.3 7920.9 7815.2 True False 7494.626919233554 6961.578067746706 8411.2602284449 7574.757154283342 7248.156925705001 6637.998498891305 6309.613032673382 6741.792948528894 6122.695887344452 7420.773022210753 6853.979944634593 1.0934707979559335 1.0156986340755698 1.2272081763281744 1.1051618498260978 1.0575106703338075 0.9684881707434289 0.9205765239527217 0.9836318464582726 0.8933051944713374 1.08269546776539 1.0 12.742726255069138 -7.145932608646271 2.4438774866302593 0.9491926713445926 1.1110574427122306 0.458878422801272 0.06645374141995247 0.14902686392895723 1.7373259748135463 0.008878149567168786 0.016579844542705925 7.146072061643423e-08 7.145932608646271 0.161864771367638 MS(ph)GFIYQGK ddPTM_A549_MK2206_60min_R1 8 MSGFIYQGK 9 0 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;E7EUY6;Q15052-2;Q15052;F6SJA5;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 MS(0.999)GFIY(0.001)QGK;MS(0.999)GFIY(0.001)QGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK 157.68 1.163e-05 416596000.0 106668.7 114479.6 114131.4 107479.0 153183.1 120161.79999999999 110441.3 112755.09999999999 163781.6 162910.2 160967.3 True False 124671.76876066985 120306.12265809355 130316.94870099999 133811.3598249154 130650.06891042525 132877.24191905287 130507.05463465747 128738.48072301164 126685.32910547187 126108.67267395211 120994.67693852371 1.0303905255601817 0.9943092184065253 1.0770469577534625 1.10592765905647 1.0798001384540854 1.0982073367290908 1.0786181502924042 1.0640011939403127 1.047032252252217 1.042266286954316 1.0 16.884584053148917 -9.817245199233776 0.7818495710414363 1.0048111315735864 1.0668486672947393 0.1928790036240282 0.03173507044783787 0.4652500119920849 0.5922426770399636 0.013497472462490386 0.006993784634955213 1.523192528512794e-10 9.817245199233776 0.06203753572115289 MS(ph)GFIYQGK ddPTM_A549_PD325901_60min_R1 8 MSGFIYQGK 9 0 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;E7EUY6;Q15052-2;Q15052;F6SJA5;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK 143.79 3.5058e-05 693488000.0 133214.6 137002.5 146914.0 150895.9 169113.2 160486.49999999997 163285.19999999998 169869.59999999998 165027.59999999998 166823.19999999998 165826.0 True False 146738.44812459443 148548.18148531552 156884.46750565033 160216.39703354664 157235.27224086798 159179.55115312958 169499.10763908955 166481.41756787658 158092.06387093765 156289.95468177466 145430.45325762316 1.0089939544137583 1.021437932412749 1.078759393177005 1.1016702034870982 1.0811715752706426 1.0945407071732807 1.1654994111778632 1.1447493550265062 1.087062993545685 1.0746714404094884 1.0 17.149969876867928 -2.003351131015987 24.98336848751937 1.0639033832053557 0.0014793793128236032 0.0 0.05160691880718382 0.0 0.0 0.008150589438488454 0.0 0.009923134296209394 2.003351131015987 -1.062424003892532 MS(ph)GSEKEPQFK ddPTM_A549_PD325901_60min_R1 1 MSGSEKEPQFK 11 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 MS(0.969)GS(0.031)EKEPQFK 53.754 0.0046012 7681000.0 2749.6 2829.6 2825.9 2710.0 3197.9 2989.9 2826.6 2670.5 3287.8 2710.7 3506.2 True False 3028.7373678514623 3068.060322482064 3017.6825675171626 2877.390545143448 2973.2905361560897 2965.5512456981864 2934.167809774869 2617.234782533277 3149.625199632483 2539.545939389045 3074.959627633052 0.9849681734465017 0.9977562940700139 0.981373069226285 0.9357490483080967 0.9669364467216689 0.9644195712517102 0.9542134418309233 0.8511444374792952 1.0242818056303733 0.8258794413323269 1.0 11.586351753521788 MS(ph)KPGSPGSVIPAQAHGK ddPTM_A549_PD325901_60min_R1 1 MSKPGSPGSVIPAQAHGK 18 1 Q8IZD2-6;Q8IZD2-5;Q8IZD2-7;Q8IZD2;Q8IZD2-2 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 MS(0.448)KPGS(0.448)PGS(0.103)VIPAQAHGK 48.656000000000006 0.0062001 7755600.0 1595.3 1493.0 1557.0 1405.1 2025.9 2144.2 2256.3 2147.0 1921.7 2080.3 2231.4 True False 1757.253681602211 1618.8203496839558 1662.6673830016011 1491.8898357863688 1883.6077729755843 2126.7383461072436 2342.1647311947354 2104.176400711083 1840.9376318917639 1948.9495029737816 1956.951946010036 0.8979544363289128 0.827215176634518 0.8496209558908987 0.7623538425806179 0.9625212191929441 1.0867606383710031 1.1968432520635455 1.0752315124554888 0.9407168303980025 0.9959107616042538 1.0 10.934392614922055 -6.915772489552664 6.068353710003468 1.0065715349636355 0.8358500329931474 0.6188564544386729 0.07476528022097656 0.14787207392269994 8.510348655811109 0.012796311477928179 0.02438390607489491 1.214024665499786e-07 6.915772489552664 -0.17072150197048808 MS(ph)LPDVDLDLKGPK ddPTM_A549_MK2206_60min_R1 1 MSLPDVDLDLKGPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MS(1)LPDVDLDLKGPK 64.13600000000001 0.0012029999999999999 1558700.0 723.15 621.38 736.91 642.64 1001.6 659.37 838.44 714.47 1014.1 680.92 970.36 True False 845.2000406799618 653.0055878714301 841.4149188326251 800.0868288492062 854.2659668114973 729.1440957456169 990.7736950568501 815.7483104726082 784.4079691849325 527.0996990805216 729.3928314264203 1.1587720694033499 0.8952728347965727 1.1535826547501589 1.0969217058036267 1.171201484309726 0.9996589825535892 1.3583540341619018 1.1183936492456454 1.0754259370097223 0.7226554421294643 1.0 9.510552210512124 -9.62583754117185 1.1708718184224647 1.0158034625130474 1.114557237972952 0.20992557862019157 0.13986063929004972 0.6149958752534849 1.7330131987219781 0.02872673657230169 0.020409552245351317 2.366804895104361e-10 9.62583754117185 0.0987537754599046 MS(ph)LPIAK ddPTM_A549_PD325901_60min_R1 1 MSLPIAK 7 0 Q6UWU4-3 Q6UWU4-3 1 MS(1)LPIAK 40.986999999999995 0.0394 2914600.0 1481.3 1765.1 1587.6 1529.4 2252.9 2054.1 2130.5 2303.7 1567.5 1842.3 1884.4 True False 1631.6804855245762 1913.8511716189896 1695.3440830143481 1623.867564480586 2094.66407608307 2037.3720906346848 2211.577343354335 2257.750896282312 1501.6234261280842 1725.9768635911157 1652.6307461958024 0.9873230842888214 1.1580633943937517 1.025845662690754 0.9825955182175894 1.2674725318434175 1.2328053894219988 1.3382162642472761 1.3661556893331668 0.9086260978652838 1.0443814309785469 1.0 10.690548698256833 -8.79151842249321 24.999977903116235 0.9568511758917967 1.1693478071228496 0.28625945150433696 0.12844666803528512 167.79953230456144 139464.59892635918 0.023552669951509658 0.025075242627954422 1.6161496686207758e-09 8.79151842249321 0.2124966312310529 MS(ph)LPLLAGGVADDINTNKK ddPTM_A549_MK2206_60min_R1 2 MSLPLLAGGVADDINTNKK 19 1 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 MS(1)LPLLAGGVADDINTNKK;MS(1)LPLLAGGVADDINTNKK 85.51 1.5155999999999999e-05 7871600.0 5081.6 5595.1 4442.3 4297.4 6970.0 6630.8 5269.6 5950.1 8545.3 6878.700000000001 7836.9 True False 5939.24984680812 5879.866691395667 5072.284938364477 5350.263192917618 5944.722233103165 7332.466854831185 6227.018109192761 6793.544896417017 6609.80319404004 5324.796892535373 5890.781442563285 1.0082278395009925 0.9981471471528794 0.8610546814239552 0.908243370609508 1.00915681409433 1.2447358514867208 1.057078448743664 1.153250203331412 1.122058806371856 0.903920293844473 1.0 12.524243312356342 -7.001617580891423 24.335164922601912 1.080529463596091 0.9439762818061559 0.338857392932273 0.08914648397422191 36.3855571500816 547416.8839832448 0.01175754051416072 0.02198617722346666 9.962823101372207e-08 7.001617580891423 -0.13655318178993503 MS(ph)LPLLAGGVADDINTNKK ddPTM_A549_PD325901_60min_R1 2 MSLPLLAGGVADDINTNKK 19 1 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 MS(1)LPLLAGGVADDINTNKK;MS(1)LPLLAGGVADDINTNKK 111.67 1.0214000000000001e-10 19238800.0 7270.6 8335.6 9029.8 7639.700000000001 10423.3 8833.9 8303.2 8573.0 9218.0 9776.7 10406.1 True False 8008.7059596671725 9038.070265790746 9642.616528598492 8111.586917982435 9691.203366432897 8761.959647270207 8619.182819685377 8402.004789611603 8830.599516458486 9159.397493497945 9126.215669702899 0.8775494958172398 0.9903415164508136 1.056584336551451 0.8888226195345332 1.0619082122511785 0.9600868491808774 0.9444421578047116 0.9206449960967368 0.9676080246245116 1.0036358798647729 1.0 13.155801032455551 -10.370349090836397 1.0552192625118864 0.9975865948911468 0.9661953226642407 0.062266934593121936 0.055948418652586276 1.2292663116091103 2.6760525824264265 0.023386807012412757 0.00952700948990826 4.262367671124524e-11 10.370349090836397 -0.031391272226906075 MS(ph)PATIAAK ddPTM_A549_MK2206_60min_R1 1 MSPATIAAK 9 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 MS(0.99)PAT(0.01)IAAK 41.398999999999994 0.031519 1633400.0 1699.4 1974.4 1772.1 1616.3 2254.9 2093.3 1781.2 1736.1 3141.2 2678.0 2921.3 True False 1986.2171736590285 2074.888526655753 2023.4104268679946 2012.2935725584653 1923.2071970479667 2314.8116165799183 2104.8209837737486 1982.197491583266 2429.7232154656435 2073.037940048225 2195.8605862216104 0.904527904058193 0.9449090437139216 0.9214657977670847 0.9164031565505684 0.8758330146802284 1.0541705749011077 0.9585403540556677 0.9026973315250437 1.1065015833479837 0.9440662822840112 1.0 11.100570746131138 -8.754609545871066 24.999559132295857 1.0502924154957727 0.936898778356817 0.22977530913472977 0.05866925367973442 104.00016727709384 380676.37420883105 0.009617985966674113 0.010787242386567322 1.7595047926396396e-09 8.754609545871066 -0.11339363713895567 MS(ph)PATIAAK ddPTM_A549_PD325901_60min_R1 2 MSPATIAAK 9 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 MS(0.998)PAT(0.002)IAAK;MS(0.996)PAT(0.004)IAAK 71.34899999999999 0.0011155999999999998 8782000.0 4566.6 4379.2 4221.8 4059.3 5903.9 5456.0 4639.8 4903.799999999999 5259.7 4760.3 5978.4 True False 5030.1978702467595 4748.250552803734 4508.316735745767 4310.033741660809 5489.2304313493005 5411.568144931037 4816.370127995983 4805.989862043322 5038.653100099447 4459.733845602122 5243.094700200058 0.9593948150611938 0.9056198341453869 0.8598579643380742 0.8220400332453186 1.0469447426039913 1.0321324435975858 0.9186120799634246 0.91663228243044 0.9610074561321943 0.8505918928818803 1.0 12.356202888550905 -6.900577985746628 0.14469499021364657 1.0245143620611994 0.8405467954780863 0.0 0.07514131095424871 16.01933981419468 0.7289144949204017 0.24765861275144113 0.6863801330853726 1.2572510710081295e-07 6.900577985746628 -0.18396756658311308 MS(ph)PFKR ddPTM_A549_PD325901_60min_R1 2 MSPFKR 6 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9 P49757-4 NUMB Protein numb homolog 1 MS(1)PFKR;MS(1)PFKR 67.277 0.022972 39553000.0 8801.599999999999 9665.400000000001 10465.0 9996.2 11342.3 11099.9 11313.5 10853.400000000001 11029.8 10635.5 11548.900000000001 True False 9695.131952604535 10479.937178724249 11175.217831157197 10613.64257098263 10545.65597681078 11009.506094560116 11744.041433484754 10636.920422672409 10566.255863162709 9963.972714934214 10128.458514508968 0.9572169287869725 1.0347020885470173 1.103348334314521 1.0479030501807 1.0411906176743657 1.0869873316644436 1.15950925964316 1.0502013122169649 1.043224479621119 0.9837600362050032 1.0 13.306127001596103 -9.733897203917358 1.0027685507397788 1.0072887943549913 1.0621559171841968 0.20968560098251687 0.04787748770223475 0.589209754895132 1.2240225423645692 0.015270082766597064 0.009627336293416153 1.8454521799792837e-10 9.733897203917358 0.05486712282920547 MS(ph)PGVAGSPR ddPTM_A549_MK2206_60min_R1 2 MSPGVAGSPR 10 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 MS(1)PGVAGSPR;MS(0.988)PGVAGS(0.012)PR 66.663 0.0049624 16613000.0 4993.7 5409.799999999999 5016.2 4803.2 6834.1 5749.3 5173.5 4326.7 7615.200000000001 7901.599999999999 7944.400000000001 True False 5836.5144757567905 5685.135712875955 5727.572588034104 5979.98421562384 5828.812943077524 6357.687109923529 6113.457983131311 4940.022974963027 5890.369358975544 6116.6230721004695 5971.5862257142235 0.9773809261305143 0.9520310848724272 0.9591375509861395 1.0014063248175926 0.9760912298273609 1.0646563357900984 1.0237578010355397 0.8272547340421569 0.9863994483762201 1.0242878258647097 1.0 12.543898488515126 -6.108370539100641 0.003108578003504429 1.9487099553102496 2.0889320429639985e-08 0.02635271668149186 0.056838658098266825 165892.91688471902 100.00942631863869 30788.343799130962 31912.063949028314 7.791650449377665e-07 6.108370539100641 -1.948709934420929 MS(ph)PKDLFEQR ddPTM_A549_MK2206_60min_R1 2 MSPKDLFEQR 10 1 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;E9PN68;E9PLN2;E9PNT0;E9PLH1 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 MS(1)PKDLFEQR;MS(1)PKDLFEQR 51.773999999999994 0.0068324 5584800.0 702.8299999999999 1028.32 978.36 649.65 1197.28 810.45 649.22 557.52 1127.19 1525.3200000000002 1589.48 True False 821.4505214562637 1080.6570956901553 1117.1061594890652 808.8142791638968 1021.1616980272255 896.2112810668295 767.1748703602028 636.550167333392 871.8832647525536 1180.749152619253 1194.7682485836867 0.6875396315813006 0.9044909730160622 0.934998198029882 0.6769633191396649 0.8546943720991418 0.7501130718272976 0.6421118666901589 0.532781288829844 0.7297509502668066 0.9882662633686052 1.0 10.22251508776865 -10.592043588447545 1.0115617170745033 0.991938122437275 0.7502871534681788 0.4162156701347053 0.1124451290112025 0.4275594643781737 0.8167166504255897 0.06825905312275679 0.021415680672372667 2.5583291044805838e-11 10.592043588447545 -0.2416509689690962 MS(ph)PKPELTEEQKQEIR ddPTM_A549_MK2206_60min_R1 2 MSPKPELTEEQKQEIR 16 2 P41208 P41208 CETN2 Centrin-2 1 MS(1)PKPELTEEQKQEIR;MS(0.999)PKPELT(0.001)EEQKQEIR 85.945 1.0318e-05 35515000.0 5479.0 5401.7 6251.5 5911.4 6727.8 5546.2 5617.2 5986.7 7387.6 7534.700000000001 7177.799999999999 True False 6403.721251310944 5676.6234574738555 7138.056703100993 7359.693265372827 5738.149532262767 6133.095202730397 6637.772529785482 6835.333058499816 5714.320395573027 5832.606036923584 5395.354162797885 1.1868954396851212 1.0521317574693025 1.3230005830422429 1.3640797329153067 1.063535285937025 1.1367363508811699 1.2302755907210572 1.2668923767101132 1.0591186830652346 1.081042293227133 1.0 12.397501949128282 -8.88977000201348 5.222525987845521 1.0255469794689096 1.2010501047206985 0.3542372725081988 0.09346279085028816 0.1504832381149853 6.251111270584728 0.016698323061443303 0.017646623158245722 1.2889319763763837e-09 8.88977000201348 0.1755031252517889 MS(ph)PKPELTEEQKQEIR ddPTM_A549_PD325901_60min_R1 3 MSPKPELTEEQKQEIR 16 2 P41208 P41208 CETN2 Centrin-2 1 MS(1)PKPELTEEQKQEIR;MS(0.998)PKPELT(0.002)EEQKQEIR;MS(0.948)PKPELT(0.052)EEQKQEIR 95.95700000000001 1.0957e-06 138981000.0 14509.9 15483.0 15621.0 14687.9 18680.300000000003 15691.8 15320.5 15948.5 17627.699999999997 17295.300000000003 17566.0 True False 15982.93436637618 16787.806747593222 16681.134996703913 15595.138224358834 17368.26017153649 15564.011183399703 15903.53001119929 15630.394656143793 16886.869070978002 16203.271806365636 15405.493360048546 1.0374827986895327 1.08972860233931 1.0828043352356063 1.0123102103826223 1.127406942810286 1.010289694698272 1.0323285103249153 1.0145987727130175 1.0961589269689438 1.0517853227853118 1.0 13.911157264893161 MS(ph)PMGTASGSNSPTSDSASVQR ddPTM_A549_MK2206_60min_R1 7 MSPMGTASGSNSPTSDSASVQR 22 0 Q5QPB1;O76080 Q5QPB1 ZFAND5 AN1-type zinc finger protein 5 1 MS(0.898)PMGT(0.098)AS(0.003)GS(0.001)NS(0.001)PTSDSASVQR;MS(0.968)PMGT(0.032)ASGSNSPTSDSASVQR;MS(0.997)PMGT(0.003)ASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(0.94)PMGT(0.059)AS(0.001)GSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR;MS(0.996)PMGT(0.004)ASGSNSPTSDSASVQR 194.08 5.6235e-51 65707900.0 4959.120000000001 5864.709999999999 4491.4 4265.75 6338.14 4692.700000000001 4033.71 4023.62 6908.469999999999 6627.209999999999 6400.74 True False 5796.098217156623 6163.198688798245 5128.348056675644 5310.858941496794 5405.808002083285 5189.278399237849 4766.582893812039 4593.980456819459 5343.712575559643 5130.118658202757 4811.2596065628695 1.2046945480244653 1.2809948314556219 1.0659054958664558 1.1038396128640489 1.1235743743092583 1.0785696103696707 0.9907141338434766 0.9548394459016454 1.1106681020226954 1.066273507919827 1.0 12.23219893130652 -5.789556010901136 0.7386180436045106 1.0430849671113438 1.2972048778666643 0.586887476873335 0.05777208029589734 0.9023927812085881 0.524460815107537 0.010451695873194266 0.16260562776875437 1.6234689584060742e-06 5.789556010901136 0.2541199107553205 MS(ph)PMGTASGSNSPTSDSASVQR ddPTM_A549_PD325901_60min_R1 6 MSPMGTASGSNSPTSDSASVQR 22 0 Q5QPB1;O76080 Q5QPB1 ZFAND5 AN1-type zinc finger protein 5 1 MS(0.97)PMGT(0.028)AS(0.001)GSNSPTSDSASVQR;MS(0.998)PMGT(0.002)ASGSNSPTSDSASVQR;MS(0.999)PMGT(0.001)ASGSNSPTSDSASVQR;MS(0.997)PMGT(0.003)ASGSNSPTSDSASVQR;MS(0.998)PMGT(0.002)ASGSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR 149.3 1.2954000000000001e-27 97417600.0 4626.700000000001 5027.25 5140.389999999999 5638.48 6364.490000000001 6005.96 6317.619999999999 5794.6 7006.57 5779.959999999999 6965.3099999999995 True False 5096.399178003482 5450.914000635411 5489.247777076167 5986.756103682809 5917.470178698542 5957.049453029693 6558.040486234314 5679.022157224242 6712.108228903509 5415.012339185853 6108.6210267379965 0.834296178416712 0.8923313423399911 0.8986066991304951 0.9800503382806408 0.9687080198292267 0.9751872684448977 1.0735713440937271 0.9296733472851956 1.0987927061646146 0.8864541302339507 1.0 12.576631024375533 -6.024050721357035 0.5353928458350949 1.0414262701057073 0.78966847208022 0.3047751113313467 0.06404717184810718 0.9466885486511691 0.290312117851852 0.009768577513421021 0.12715400240321093 9.461266565531142e-07 6.024050721357035 -0.25175779802548737 MS(ph)PPPSGFGER ddPTM_A549_PD325901_60min_R1 1 MSPPPSGFGER 11 0 A0A087WZ13;Q8IY67-2;E9PAU2;K7EQG2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 MS(0.981)PPPS(0.019)GFGER 41.242 0.032373 14223000.0 5148.7 4716.4 5135.2 4778.6 5568.4 5655.0 4951.8 6062.9 5275.7 5591.6 6528.8 True False 5671.392233727388 5113.867580207238 5483.705552466164 5073.763269011987 5177.294793937133 5608.947554909276 5140.243458728931 5941.970703246961 5053.980675740948 5238.545421731572 5725.798989473126 0.9904979626693559 0.8931273329030719 0.9577188375889459 0.8861231905521123 0.9042047762164866 0.9795921172261406 0.8977338303666024 1.0377539823125588 0.8826681979288278 0.9149020828992828 1.0 12.483261308478124 -7.24587648840329 24.45083662186648 0.9493490673791481 0.9239992070770598 0.05860355224705027 0.05039050934656375 1772.0331066295892 2784037.281359873 0.008088689389158934 0.013983273686592888 5.677060357562187e-08 7.24587648840329 -0.0253498603020883 MS(ph)PQAR ddPTM_A549_PD325901_60min_R1 2 MSPQAR 6 0 K7EQV2;K7ERD7;O95707 K7EQV2 POP4 Ribonuclease P protein subunit p29 1 MS(1)PQAR;MS(1)PQAR 64.734 0.020666999999999998 60354000.0 2563.11 2194.9 2854.5 2412.5 2436.0 2770.7 2600.67 2045.3000000000002 2435.4 2410.5 2647.4 True False 2823.3150403381464 2379.8719260022203 3048.2235355029343 2561.514645814969 2264.903763743779 2748.136337822657 2699.6399199912285 2004.5048869931886 2333.0486073316333 2258.300618621497 2321.78658325131 1.2160097145468565 1.0250175202018657 1.3128784348621567 1.1032515496010646 0.975500409935234 1.1836300363034697 1.1627424929860661 0.863345882628964 1.0048505853903904 0.9726564167922315 1.0 11.181019651596278 -8.23076694916129 24.954940326457404 0.9919336931972413 1.1360526433989928 0.44590218722885444 0.09388413811160203 540.6107001545957 439838.7981234663 0.014265532877656195 0.018415606005963172 5.87804695308031e-09 8.23076694916129 0.14411895020175147 MS(ph)PSKSPFLPSMK ddPTM_A549_MK2206_60min_R1 7 MSPSKSPFLPSMK 13 1 A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;A0A3F2YNW7;Q8NFD5-4;Q8NFD5;Q8NFD5-2;Q8NFD5-3 A0A1B0GV63 ARID1B AT-rich interactive domain-containing protein 1B 1 MS(0.633)PS(0.155)KS(0.155)PFLPS(0.057)MK;MS(0.998)PS(0.002)KSPFLPSMK;MS(0.748)PS(0.1)KS(0.136)PFLPS(0.016)MK;MS(0.98)PS(0.018)KS(0.003)PFLPSMK;MS(0.913)PS(0.086)KS(0.001)PFLPSMK;MS(0.948)PS(0.046)KS(0.006)PFLPSMK;MS(0.989)PS(0.007)KS(0.004)PFLPSMK 93.495 4.8926000000000006e-05 52008000.0 22420.5 23216.5 24058.4 23472.800000000003 31640.9 22934.600000000002 23350.5 20893.0 34508.7 33423.3 35016.5 True False 26204.532271402997 24398.12068431082 27470.24288344956 29223.63705373405 26986.565524446785 25361.52414924463 27592.983596232276 23854.646732129004 26692.53454907019 25872.95331651001 26320.936643764428 0.9955774988581568 0.926947282101789 1.0436650965442527 1.1102810454375411 1.0252889511376886 0.9635494546601902 1.048328331536378 0.9062993105065013 1.014117959035238 0.9829799625553771 1.0 14.683923208564494 MS(ph)PSKSPFLPSMK ddPTM_A549_PD325901_60min_R1 6 MSPSKSPFLPSMK 13 1 A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;A0A3F2YNW7;Q8NFD5-4;Q8NFD5;Q8NFD5-2;Q8NFD5-3 A0A1B0GV63 ARID1B AT-rich interactive domain-containing protein 1B 1 MS(0.518)PS(0.066)KS(0.392)PFLPS(0.024)MK;MS(0.878)PS(0.12)KS(0.002)PFLPSMK;MS(0.858)PS(0.051)KS(0.089)PFLPS(0.001)MK;MS(0.958)PS(0.039)KS(0.003)PFLPSMK;MS(0.979)PS(0.021)KSPFLPSMK;MS(0.982)PS(0.018)KS(0.001)PFLPSMK 113.88 5.8159000000000005e-06 69609000.0 29028.3 28227.299999999996 28243.3 30547.499999999996 36770.4 35060.4 34054.799999999996 37023.1 34703.6 35056.2 35931.7 True False 31975.231646494998 30606.113634717978 30160.060178759868 32434.34969659388 34187.77395499353 34774.879726638595 35350.7740495016 36284.64522643993 33245.12837701985 32842.745549271465 31512.32868981305 1.014689582646794 0.9712425233940891 0.9570876362593181 1.0292590565380493 1.0849015409656275 1.1035325275050278 1.1218077342830395 1.1514428395185412 1.0549879922954395 1.0422189319156379 1.0 14.943628749744603 -6.449046070489792 5.143228491477849 1.0530796736293184 0.9808207356142641 0.4111307885201171 0.04545556438742669 0.2519812217804316 12.177115188917016 0.00821003652773541 0.019275913832325586 3.5559359476469577e-07 6.449046070489792 -0.07225893801505434 MS(ph)PSQFAR ddPTM_A549_MK2206_60min_R1 2 MSPSQFAR 8 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 MS(0.572)PS(0.428)QFAR;MS(0.773)PS(0.227)QFAR 57.266999999999996 0.01705 15923500.0 2216.05 2248.42 2017.5300000000002 2037.16 2563.2 1922.35 2113.86 1999.52 2774.75 3432.3 2976.3999999999996 True False 2590.0650627792693 2362.854974221701 2303.6460913712476 2536.2642914515864 2186.1566754505075 2125.7718010473436 2497.920999752962 2282.9580832731817 2146.2735553652415 2656.9410461641223 2237.277735538971 1.1576859777560475 1.0561294812387154 1.0296647817917377 1.1336385515142975 0.9771503290465866 0.950159994568236 1.1165001823750778 1.020417826096681 0.9593237000806223 1.187577654735858 1.0 11.127528648262091 -2.0000000056012572 0.2818402271910267 0.9819221222504017 2.1610248233625606 0.0 0.08200815429406327 33.64176860955962 0.4186748912028936 0.020302668017349913 19.911654647543575 0.009999999871026287 2.0000000056012572 1.1791027011121589 MS(ph)PSQFAR ddPTM_A549_PD325901_60min_R1 2 MSPSQFAR 8 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 MS(0.997)PS(0.003)QFAR;MS(0.974)PS(0.026)QFAR 81.95 0.0036270000000000004 25421000.0 4417.9 3839.2 3753.8 4440.3 4959.0 4040.0 4449.200000000001 4104.4 4101.0 3955.3 4415.4 True False 4866.401955713914 4162.742857673573 4008.5554414331455 4714.567246347029 4610.696947621264 4007.0995794577316 4618.516740695662 4022.534522160489 3928.64923161166 3705.561682984277 3872.3337915267166 1.2567103503221693 1.0749958763323342 1.0351781786488818 1.21750022083924 1.1906765263134609 1.034802213648499 1.192695926885671 1.0387881672190644 1.0145430231784693 0.9569324036818925 1.0 11.918987601588826 -8.428069735024533 4.948686625191814 1.0076612098329754 1.1367217597472763 0.4836137306676844 0.0702360086194699 0.1530263481766293 6.1091659561453575 0.010835397289428124 0.01308001790648038 3.731902295203466e-09 8.428069735024533 0.12906054991430094 MS(ph)PVDFHT(ph)PSSPK ddPTM_A549_MK2206_60min_R1 1 MSPVDFHTPSSPK 13 0 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 2 MS(0.995)PVDFHT(0.839)PS(0.088)S(0.077)PK 50.675 0.007881399999999998 5307900.0 1233.6 1994.6 1667.5 1168.8 1926.8 1982.6 1513.1 1426.9 2505.1 2174.9 2330.3 True False 1441.8015213756482 2096.1166203745756 1903.976574009582 1455.1560524694257 1643.3702724165264 2192.3974160566327 1788.01068411636 1629.16744469798 1937.6988498226747 1683.588579466349 1751.6221969918245 0.8231235730237653 1.1966716475586883 1.0869790170959273 0.8307476663452088 0.9381990449988552 1.251638292676229 1.0207741641930708 0.9300906596729911 1.106231042944313 0.9611596509553749 1.0 10.77447592187125 MS(ph)PVDFHTPSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 MSPVDFHTPSSPK 13 0 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 2 MS(0.992)PVDFHT(0.008)PS(0.21)S(0.79)PK;MS(0.999)PVDFHT(0.001)PS(0.265)S(0.735)PK 91.31700000000001 6.3569e-05 6897300.0 1224.0900000000001 1348.8400000000001 1449.3899999999999 1187.92 2272.3999999999996 1959.04 1792.16 1816.51 2734.5 2293.33 2441.6 True False 1430.6864658728266 1417.490194638546 1654.9352963140927 1478.9604533277559 1938.1329702300777 2166.3443124944934 2117.772273905211 2074.005855328563 2115.140116099199 1775.265160213141 1835.2833352680948 0.7795452823984993 0.7723549641622401 0.9017328629927013 0.8058485711208793 1.0560401944405815 1.1803868486486517 1.1539211593156273 1.1300739321678612 1.1524869623415521 0.967297597105797 1.0 10.841787091507914 -6.80036870929056 5.023337912316056 1.092855663105168 0.8169783405689709 0.7902001174597173 0.0687019304766797 0.07159045610019572 4.207703047325523 0.010908464364483346 0.02144932373033137 1.5835482136949126e-07 6.80036870929056 -0.2758773225361971 MS(ph)PVDFHTPSSPK ddPTM_A549_MK2206_60min_R1 3 MSPVDFHTPSSPK 13 0 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 1 MS(0.994)PVDFHT(0.005)PSSPK;MS(0.999)PVDFHT(0.001)PSSPK;MS(0.998)PVDFHT(0.002)PSSPK 96.414 5.1183e-05 13565300.0 2317.78 2484.6099999999997 2263.25 2004.87 3421.6 2962.2 2684.15 2763.8 4015.2 3620.5 4401.9 True False 2708.9645997195616 2611.0660363726447 2584.2128822351947 2496.0632400020327 2918.2871725661107 3275.6580378507792 3171.8253107996325 3155.577113782518 3105.763610956849 2802.6265354535467 3308.786743740426 0.8187184033073119 0.7891309530033231 0.7810152428602469 0.754374165915677 0.8819810397532981 0.9899876575749949 0.9586067511906297 0.9536961303874447 0.9386412154945746 0.8470254363644212 1.0 11.692086595453485 -6.996541883010008 3.5281243253187515 0.9687303113978875 0.7863039961201987 0.7508827781918236 0.04259932291877076 0.04928674477594395 1.3152535594738115 0.0040852790134148 0.007760378471380001 1.007994394509249e-07 6.996541883010008 -0.1824263152776887 MS(ph)PVDFHTPSSPK ddPTM_A549_PD325901_60min_R1 3 MSPVDFHTPSSPK 13 0 Q02297-11;H0YBA3;A0A494C0Q4;Q02297-2;Q02297-6;Q02297;Q02297-7;A0A494C1F5;A0A494C1F8 Q02297-11 NRG1 Pro-neuregulin-1, membrane-bound isoform;Neuregulin-1 1 MS(0.996)PVDFHT(0.004)PSSPK;MS(0.996)PVDFHT(0.004)PSSPK;MS(0.977)PVDFHT(0.023)PSSPK 70.134 0.00071764 43949000.0 8396.1 7942.5 7909.9 8874.9 10497.5 9899.400000000001 8602.1 9014.9 9127.1 8600.7 10271.0 True False 9248.465891117858 8611.842349206172 8446.71338009272 9423.082416639692 9760.191814408992 9818.782568535611 8929.457622749735 8835.09074744776 8743.519727345229 8057.650334195352 9007.732113233436 1.0267252372581945 0.9560500069217583 0.9377180930684526 1.0461104191582316 1.0835348666808267 1.0900393623063729 0.991310299917922 0.9808340919095446 0.9706682678207039 0.8945259731201042 1.0 13.136948207478047 -6.2516184601601115 24.68563468268583 1.0034506175662572 0.971753008806007 0.06507217194310333 0.05540587907949616 1336.7727752712233 3360070.7780132308 0.007083788926641136 0.018453025020315615 5.602495802688754e-07 6.2516184601601115 -0.031697608760250184 MS(ph)QLFHR ddPTM_A549_PD325901_60min_R1 3 MSQLFHR 7 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 MS(1)QLFHR;MS(1)QLFHR;MS(1)QLFHR 75.378 0.014835 5981400.0 1688.8 1663.39 1765.12 1841.5500000000002 1924.54 2066.96 1755.8100000000002 1894.06 2338.13 1820.7800000000002 1697.65 True False 1860.2457327711481 1803.5697129677133 1884.911657728828 1955.2983610364993 1789.366949702567 2050.1273630584037 1822.6283103660994 1856.2814874386736 2239.8665271660966 1705.815640063742 1488.8498122900155 1.2494515681940308 1.2113845856578533 1.2660186690218442 1.3132945612754818 1.201845165934046 1.3769873536841715 1.224185472114676 1.2467889454769838 1.5044274504229103 1.1457271418397863 1.0 10.539982514073989 -11.084153916052284 1.4243384827476548 1.0008060315692533 1.3111629079150697 0.39576783829061346 0.09461571245137075 0.2532641893798301 0.921600171333699 0.07395725143924457 0.01642320356889022 8.238460882538481e-12 11.084153916052284 0.31035687634581643 MS(ph)RPEAVQEATEVTLK ddPTM_A549_MK2206_60min_R1 2 MSRPEAVQEATEVTLK 16 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 MS(0.997)RPEAVQEAT(0.003)EVTLK;MS(0.998)RPEAVQEAT(0.002)EVTLK 52.823 0.0038255000000000003 13080000.0 2276.7 3099.1000000000004 2705.0 2776.0 3534.2 2892.7 2264.4 2355.0 4399.1 4416.0 5576.6 True False 2660.9513000291336 3256.830952673645 3088.609674780163 3456.1201246193746 3014.3238617264296 3198.803593981143 2675.812169131639 2688.828461885025 3402.7108739191776 3418.4225329548 4191.776313669745 0.6348027902518417 0.7769572393576532 0.7368259763069751 0.8245001321632235 0.7191041783161136 0.7631140964152996 0.6383480340793912 0.6414532314418885 0.8117586959071845 0.8155069061788981 1.0 12.033346016859573 -9.807593981836256 0.8335969174140865 0.9787591904920833 0.7244044544639455 0.3937820003596918 0.07945513907478968 0.21420001097775257 0.30945654743134027 0.025615777382205187 0.013924771815712753 1.557420970634087e-10 9.807593981836256 -0.25435473602813774 MS(ph)RPEAVQEATEVTLK ddPTM_A549_PD325901_60min_R1 1 MSRPEAVQEATEVTLK 16 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 MS(1)RPEAVQEATEVTLK 152.48 1.1017999999999999e-15 9200900.0 2940.8 2965.1 2922.2 2479.1 3277.8 3256.2 2731.8 2652.6 2672.0 3106.7 3971.6 True False 3239.3478510974614 3214.9793830193553 3120.518064616107 2632.2283765553952 3047.5786357961233 3229.6825867896687 2835.7601438983197 2599.6918120755563 2559.705132130297 2910.542431807261 3483.1183780467245 0.9300137117114103 0.9230175475179407 0.8958977921290295 0.7557102833902262 0.8749569509334779 0.9272388234478616 0.8141440617612794 0.7463690664264534 0.7348889283417744 0.8356139860625252 1.0 11.766163790178966 -4.4380513561688195 17.680293152926325 0.8642262743698561 0.8715639206324394 0.0 0.0836816483529615 0.0 0.0 0.014183465389052416 0.0 3.6471081661073916e-05 4.4380513561688195 0.007337646262583264 MS(ph)RRKAGS(ph)APR ddPTM_A549_PD325901_60min_R1 1 MSRRKAGSAPR 11 3 Q8WUU4 Q8WUU4 ZNF296 Zinc finger protein 296 2 MS(1)RRKAGS(1)APR 44.765 0.017641 9285500.0 492.98 880.63 693.13 512.72 624.69 699.98 448.96 349.07 407.82 970.65 714.21 True False 543.026966687305 954.8437806712532 740.169969929287 544.3895499283943 580.8139294635065 694.279594957629 466.0454184803384 342.1075250098826 390.6807436322522 909.3629933478344 626.3666977502146 0.8669473786485625 1.5244165823324634 1.1816879354982175 0.8691227549033721 0.9272746005649333 1.1084235439900367 0.7440456527370971 0.5461777042723779 0.6237252795135824 1.4518061011450427 1.0 9.290863700188153 -6.616804533021419 1.0406888726744474 0.802024714433603 1.2261613794632018 0.08152532015324221 0.28530368686241964 0.49261316965971524 0.9963907105926582 0.036577737421076555 0.1346708643442789 2.4165482281781774e-07 6.616804533021419 0.4241366650295988 MS(ph)SPEDDSDTKR ddPTM_A549_MK2206_60min_R1 3 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 MS(0.5)S(0.5)PEDDSDTKR;MS(0.834)S(0.166)PEDDSDTKR;MS(0.5)S(0.5)PEDDSDTKR 53.967 0.0037275 21574800.0 1587.23 1487.7399999999998 1398.35 1379.37 1625.79 1261.5900000000001 1615.8799999999999 1474.8600000000001 1889.3 1917.0500000000002 2138.6 True False 1855.1156199522304 1563.459611348678 1596.657056831364 1717.3157119222715 1386.6384446709903 1395.0906164243352 1909.464479710491 1683.9259215693194 1461.376566592144 1483.9870735509523 1607.5265976426701 1.1540186163467734 0.9725870872938505 0.9932383446549216 1.068296919279967 0.8625912919291056 0.8678491655877681 1.187827612003803 1.0475260092359802 0.9090839111061395 0.9231493125694591 1.0 10.650626892803011 MS(ph)SPEDDSDTKR ddPTM_A549_PD325901_60min_R1 3 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 MS(0.5)S(0.5)PEDDSDTKR;MS(0.5)S(0.5)PEDDSDTKR;MS(0.5)S(0.5)PEDDSDTKR 57.678999999999995 0.0036339 77472000.0 3604.31 3982.21 4156.6 3836.4 5141.4 4732.1 4602.200000000001 4432.9 4342.5 4335.4 5517.5 True False 3970.2168978472155 4317.80481226721 4438.691871666318 4073.365714903442 4780.285800867102 4693.563346522755 4777.339239420471 4344.482331957225 4159.999826450531 4061.6621041160092 4838.882478314231 0.8204821910100116 0.8923144613694867 0.9172968948013527 0.8417988519370945 0.9878904524526616 0.9699684519219606 0.9872815181667317 0.8978276185518677 0.8597025956083545 0.8393801920833197 1.0 12.24045818564325 -3.50645636591591 0.5818591127749774 0.9372319149284459 5.16344550589682e-07 0.20844046413124506 0.05654372656273631 25.1216853848659 1.1419513727828126 0.010559812410659692 24.894225934323348 0.0003115613909691049 3.50645636591591 -0.9372313985838954 MS(ph)SPPSSPQK ddPTM_A549_MK2206_60min_R1 2 MSSPPSSPQK 10 0 A0A087X1M6;G5E9X3;Q9Y2H6-2;Q9Y2H6 A0A087X1M6 FNDC3A Fibronectin type-III domain-containing protein 3A 1 MS(0.563)S(0.437)PPSSPQK;MS(0.499)S(0.499)PPS(0.001)SPQK 81.865 0.00038605 16866400.0 2593.9 1937.3400000000001 2153.7 2167.6 3157.8999999999996 2116.83 2231.87 2721.7200000000003 2873.9 3341.5 3518.4 True False 3031.6869052337033 2035.9423309518127 2459.12704494419 2698.6620973072604 2693.3770932448333 2340.831545561969 2637.37188920678 3107.532144917924 2222.9662386752584 2586.652829227461 2644.684177099959 1.1463323036772255 0.7698243701765308 0.9298376971577594 1.0204099682959087 1.0184116185087433 0.8851081599198053 0.9972350997686245 1.1750106768232353 0.840541285770032 0.9780573618676343 1.0 11.36887973352835 MS(ph)SPPSSPQK ddPTM_A549_PD325901_60min_R1 2 MSSPPSSPQK 10 0 A0A087X1M6;G5E9X3;Q9Y2H6-2;Q9Y2H6 A0A087X1M6 FNDC3A Fibronectin type-III domain-containing protein 3A 1 MS(0.654)S(0.344)PPS(0.001)SPQK;MS(0.757)S(0.243)PPSSPQK 85.958 0.00028291 17923200.0 4486.799999999999 4296.8 4871.4 4747.5 4831.0 4511.3 4387.2 4439.4 4947.6 5266.5 5876.0 True False 4942.296632992415 4658.906415620913 5202.002498107899 5040.742292645207 4491.687226045236 4474.561468516747 4554.157296767955 4350.852684358071 4739.669577742461 4933.972291213487 5153.289251032976 0.9590567096542723 0.9040646058606232 1.0094528454938092 0.9781601705424922 0.8716155851614341 0.8682923178860612 0.8837379535517195 0.8442865269955385 0.9197367636199337 0.9574413643139618 1.0 12.331277857032555 -10.36375606805951 0.9852647639414138 0.9949217031409605 0.9153475988241097 0.18353406753927837 0.049118771702748976 0.5190421324237573 0.9774949018368366 0.024605732506664993 0.009565254664488682 4.3275683106713137e-11 10.36375606805951 -0.07957410431685086 MS(ph)VDAVEIETLR ddPTM_A549_MK2206_60min_R1 1 MSVDAVEIETLR 12 0 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;P78347-5 P78347-2 GTF2I General transcription factor II-I 1 MS(1)VDAVEIETLR 48.64 0.011670999999999999 841680.0 562.8 597.09 491.56 524.01 696.88 507.1 704.1 622.88 911.44 693.65 757.14 True False 657.7868808610692 627.4793306224086 561.2705995323244 652.392473523703 594.3698751513537 560.7609854142631 832.0258559819763 711.1751474899977 705.0002952705993 536.9539832391528 569.1212419990517 1.1557939368957262 1.102540696633239 0.9862056765986247 1.146315451576116 1.0443642431331777 0.9853102362592847 1.46194834172674 1.2496021849263232 1.2387523839283687 0.9434790754832649 1.0 9.152592217698563 MS(ph)VSADER ddPTM_A549_MK2206_60min_R1 1 MSVSADER 8 0 Q9Y2K1-2;Q9Y2K1 Q9Y2K1-2 ZBTB1 Zinc finger and BTB domain-containing protein 1 1 MS(0.955)VS(0.045)ADER 81.263 0.0037549 5913600.0 1008.1 972.03 853.32 772.46 1043.2 948.26 655.22 862.82 794.79 1035.9 1372.7 True False 1178.2426343213292 1021.5021751241853 974.3336072766765 961.7127346770474 889.7466619186839 1048.604243795956 774.2649926949449 985.1273772754292 614.771334018827 801.8894705362046 1031.8207054073193 1.1419063681768322 0.9899996867391213 0.944285768031812 0.9320541152519358 0.8623074311805455 1.0162659445586637 0.7503871444305799 0.954746664912624 0.5958121704643843 0.7771597006474613 1.0 10.010976586923135 -5.040232151575144 0.5056315324726736 0.8214984840695658 1.3908921467893818 0.3796112489162836 0.11318924950834713 5.056668704657165 0.7326618742301058 0.0297329861521306 1.7869038216238835 9.115234553729095e-06 5.040232151575144 0.569393662719816 MS(ph)VSADER ddPTM_A549_PD325901_60min_R1 2 MSVSADER 8 0 Q9Y2K1-2;Q9Y2K1 Q9Y2K1-2 ZBTB1 Zinc finger and BTB domain-containing protein 1 1 MS(0.995)VS(0.005)ADER;MS(0.994)VS(0.006)ADER 79.16 0.0041464 4152700.0 877.63 1200.4 721.7 1006.9 1121.6 922.12 1106.6 1122.8 1190.7 1545.1 1747.4 True False 966.726351522942 1301.5619208041671 770.6789019346529 1069.0939261641838 1042.8226853099427 914.6105604479111 1148.7122685547545 1100.4048731804394 1140.6590197707874 1447.542122311584 1532.480877681249 0.6308244139304803 0.8493169081323361 0.502896260017772 0.6976230122895875 0.680480063730261 0.5968169481055979 0.7495769019270483 0.7180545540283864 0.7443218616187136 0.9445743456856811 1.0 10.581653356720688 -10.317674523783241 0.43733841251849165 1.0525577989302692 0.662082202385435 0.6504801297434974 0.08282795762315982 0.6227249939702735 0.1911027540881868 0.10526635090919034 0.022948054846325918 4.811998421637023e-11 10.317674523783241 -0.3904755965448342 MSAAELRS(ph)LEEMSLR ddPTM_A549_MK2206_60min_R1 2 MSAAELRSLEEMSLR 15 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 MS(0.001)AAELRS(0.992)LEEMS(0.008)LR;MS(0.002)AAELRS(0.993)LEEMS(0.005)LR 61.648 0.0014347000000000001 3931100.0 566.06 810.09 563.02 420.79 507.66 748.76 736.5699999999999 603.01 933.26 1069.73 1008.3199999999999 True False 661.5970891617219 851.3201208258502 642.864702068291 523.8835688899809 432.98388649313574 827.9932862133376 870.395234683489 688.4885141406749 721.87810010998 828.0772500402488 757.926315783717 0.872904232751982 1.1232228029258509 0.8481889184749456 0.6912064642435204 0.5712743804724847 1.092445622972161 1.1483903072866337 0.9083844956996361 0.9524383638316317 1.0925564039612397 1.0 9.56591378880356 MSAAELRS(ph)LEEMSLR ddPTM_A549_PD325901_60min_R1 2 MSAAELRSLEEMSLR 15 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 MS(0.001)AAELRS(0.845)LEEMS(0.155)LR;MSAAELRS(0.993)LEEMS(0.007)LR 58.158 0.0025165 5940800.0 810.2 708.75 872.09 1044.08 1227.42 1084.4299999999998 1059.57 1143.71 1017.3199999999999 932.74 1047.21 True False 892.4509075622838 768.4788498583415 931.2752717031899 1108.5704503222769 1141.2102535691251 1075.5987616216198 1099.8925161689522 1120.8978068268618 974.565578225596 873.8466372175956 918.4098088111369 0.9717349477326941 0.8367493927935308 1.0140084118969799 1.2070542362317527 1.2425937121102821 1.1711533906785696 1.1976053670340705 1.2204767371527112 1.0611445662662855 0.9514779010785747 1.0 9.842994240158987 -5.977493915158314 7.119297196732009 1.090884959776552 0.9079757327595932 0.4049334757441164 0.09948941180168322 0.1602724123824445 32.60630729281265 0.01573492540166332 0.048520950040130094 1.0531884431082386e-06 5.977493915158314 -0.18290922701695878 MSADMS(ph)EIEAR ddPTM_A549_PD325901_60min_R1 1 MSADMSEIEAR 11 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 MS(0.139)ADMS(0.861)EIEAR 43.083 0.025208 2285800.0 704.16 773.85 637.97 636.41 916.97 656.64 495.44 473.81 852.41 638.49 753.8 True False 775.6458048248062 839.0650553268116 681.2664806252611 675.7196003080222 852.5651905747673 651.2925415482985 514.2942403151708 464.35948785324587 816.5861720356237 598.1756324346147 661.087378731902 1.1732878735525856 1.2692195953525938 1.0305241070130042 1.022133566676447 1.2896407010676227 0.985183748020735 0.7779519876807967 0.7024177178272263 1.2352167025212302 0.9048359591768873 1.0 9.36869716125327 -5.765974954865364 24.9436281188176 1.0572463924760485 1.2212537489085844 0.12908448540762907 0.17263647518670422 175.9493751576152 967669.0348071747 0.025721320287635574 0.08408385256870309 1.7140561517974704e-06 5.765974954865364 0.16400735643253594 MSDT(ph)GSPGMQR ddPTM_A549_MK2206_60min_R1 2 MSDTGSPGMQR 11 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 MS(0.002)DT(0.561)GS(0.438)PGMQR;MS(0.019)DT(0.538)GS(0.442)PGMQR 57.163999999999994 0.012733 22765600.0 2500.33 1872.25 2091.81 2233.08 2782.0200000000004 2376.26 2328.5299999999997 2436.55 3603.58 3237.3999999999996 3624.9500000000003 True False 2922.324576800565 1967.53952797368 2388.4601123112366 2780.184700246771 2372.788543319609 2627.714255966274 2751.5937600194734 2781.938424121424 2787.3748837347807 2506.06909152805 2724.7748714695604 1.0725012944737191 0.7220925106786974 0.8765715425961271 1.0203355621623618 0.8708200329372116 0.9643784825970086 1.0098426071198494 1.0209791837301527 1.0229743796159785 0.9197343669631117 1.0 11.411921319971224 -7.529209377294862 3.2080504654878084 1.0119312522292083 0.9058009911517612 0.14995770932656627 0.08829938809935464 0.2493800874042694 5.328309353667156 0.012036517941858355 0.01898914760793429 2.956586725715909e-08 7.529209377294862 -0.10613026107744716 MSDTGS(ph)PGMQR ddPTM_A549_PD325901_60min_R1 1 MSDTGSPGMQR 11 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 MS(0.005)DT(0.03)GS(0.965)PGMQR 81.676 0.00076428 4942400.0 3749.3 3444.1 3334.5 3964.9 3596.3 3624.8 3326.1 4178.0 3874.6 4041.5 4847.4 True False 4129.926175911219 3734.346394070002 3560.799221977416 4209.802868058767 3343.7082945614757 3595.2808305986077 3452.6765556117566 4094.6665124224046 3711.764036284452 3786.319000273295 4251.2005302003445 0.9714729160792115 0.8784216052715855 0.8375985081582609 0.9902621243464075 0.7865327148902802 0.8457095366492097 0.8121650651584398 0.9631788675537818 0.8731096098422647 0.890647000388584 1.0 12.053654597532896 -10.740520750749566 0.6638216032272346 1.013833126342975 0.8796986319262072 0.013592285262741588 0.07068605474629887 0.9074169478475146 0.5901949136299469 0.07068015901672878 0.012258945363375967 1.817520212238723e-11 10.740520750749566 -0.13413449441676772 MSES(ph)PTPCSGSSFEETEALVNTAAK ddPTM_A549_MK2206_60min_R1 4 MSESPTPCSGSSFEETEALVNTAAK 25 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MS(0.035)ES(0.773)PT(0.191)PCSGSSFEETEALVNTAAK;MS(0.069)ES(0.746)PT(0.185)PCSGSSFEETEALVNTAAK;MS(0.046)ES(0.766)PT(0.185)PCS(0.001)GS(0.001)S(0.001)FEETEALVNTAAK;MS(0.161)ES(0.654)PT(0.183)PCSGSSFEETEALVNTAAK 162.26 3.1699999999999997e-41 103192000.0 4803.4800000000005 5520.59 5322.739999999999 5530.46 7209.599999999999 5663.299999999999 6045.530000000001 5826.25 9539.0 8679.01 8189.0 True False 5614.189990189282 5801.564450653605 6077.5845694415375 6885.422948271783 6149.077390499366 6262.586647005707 7143.924546392156 6652.138779642302 7378.431730652868 6718.415613165774 6155.445295097651 0.9120688627775738 0.9425093023366017 0.987350919076785 1.1185905516462804 0.998965484332489 1.0174059465678926 1.1605861483460431 1.0806917226508748 1.198683665750264 1.0914589101322183 1.0 12.58764751209343 -5.714256860811794 0.7283489264778334 1.0944703681117955 0.8490370413815276 0.5098541993295209 0.06052585938649844 1.3514171176177314 0.7185676190961569 0.013243401782367898 0.23755701657981057 1.9308260040271e-06 5.714256860811794 -0.24543332673026796 MSES(ph)PTPCSGSSFEETEALVNTAAK ddPTM_A549_PD325901_60min_R1 8 MSESPTPCSGSSFEETEALVNTAAK 25 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MS(0.172)ES(0.653)PT(0.172)PCS(0.001)GS(0.001)S(0.001)FEETEALVNTAAK;MS(0.162)ES(0.69)PT(0.144)PCS(0.001)GS(0.001)S(0.001)FEETEALVNTAAK;MS(0.178)ES(0.665)PT(0.155)PCS(0.001)GS(0.001)S(0.001)FEETEALVNTAAK;MS(0.028)ES(0.794)PT(0.178)PCSGSSFEETEALVNTAAK;MS(0.028)ES(0.778)PT(0.191)PCS(0.001)GS(0.001)S(0.001)FEETEALVNTAAK;MS(0.159)ES(0.676)PT(0.159)PCS(0.002)GS(0.002)S(0.002)FEETEALVNTAAK;MS(0.041)ES(0.741)PT(0.218)PCSGSSFEETEALVNTAAK;MS(0.146)ES(0.708)PT(0.146)PCSGSSFEETEALVNTAAK 137.9 9.083899999999999e-25 224862200.0 12296.62 11349.19 13122.2 12036.29 14349.6 12868.3 12282.56 13130.400000000001 12655.2 14325.400000000001 15087.499999999998 True False 13544.963810106805 12305.626071285773 14012.75140219885 12779.744296902083 13341.733599432564 12763.504831271273 12749.979542074725 12868.503871400473 12123.34595364347 13420.891799211935 13231.83314754254 1.023664949449761 0.9300016055274408 1.059018145554635 0.9658332412750821 1.0083057616178024 0.9646059384932429 0.9635837604589726 0.9725412743577752 0.916225727641907 1.0142881677513071 1.0 13.69172532700602 -7.348032917253106 6.1462992801728875 0.9609251519317581 0.9952381984263802 0.05846032894179631 0.03895125708250369 0.3614094118678476 20.969523117797337 0.0059403774123836925 0.009543648924285764 4.4871137866563885e-08 7.348032917253106 0.03431304649462208 MSFEILRGS(ph)DGEDSASGGK ddPTM_A549_PD325901_60min_R1 2 MSFEILRGSDGEDSASGGK 19 1 Q14674-2;Q14674 Q14674-2 ESPL1 Separin 1 MS(0.003)FEILRGS(0.997)DGEDSASGGK;MS(0.434)FEILRGS(0.563)DGEDS(0.002)AS(0.001)GGK 80.683 5.6186e-05 12205600.0 5739.4 5747.5 6029.299999999999 6751.7 6918.799999999999 6755.0 5806.3 6124.8 6713.9 6437.200000000001 7184.3 True False 6322.059662877035 6231.861995853001 6438.4845551262315 7168.73717477676 6432.847356564228 6699.989519613113 6027.261923829272 6002.636059187352 6431.738131216166 6030.754093420575 6300.6766450299865 1.0033937653131138 0.9890782128565084 1.0218719223124946 1.1377725883507297 1.0209772249840021 1.0633761891110707 0.9566054986465008 0.9526970510258241 1.0208011763767566 0.9571597517510555 1.0 12.62129105613329 -7.740034612506455 24.999864249829947 1.00125057737563 1.0399595251542955 0.26292142346710523 0.04411515293814209 356.0947433232707 415902.3749102964 0.0067233907720108425 0.009967481150958763 1.8195558374307315e-08 7.740034612506455 0.038708947778665515 MSFSS(ph)LKR ddPTM_A549_PD325901_60min_R1 1 MSFSSLKR 8 1 P35240;P35240-4;P35240-6;P35240-5;P35240-8;P35240-3;P35240-2;A0A5F9ZHD8;P35240-9;P35240-10;P35240-7 P35240 NF2 Merlin 1 MS(0.002)FS(0.023)S(0.975)LKR 42.312 0.033624 9730100.0 4697.5 4080.8 5543.3 4654.3 5688.1 5545.4 5213.4 5763.2 6070.4 5297.7 5976.4 True False 5174.386741883275 4424.703337568846 5919.501672570826 4941.785540317765 5288.587478879716 5500.240100971509 5411.798789881946 5648.248454857062 5815.282198384638 4963.202317888863 5241.340687521012 0.9872257978197932 0.8441930416970453 1.129386930840888 0.9428476099795513 1.0090142568811054 1.0493956468174077 1.0325218512825876 1.077634290841816 1.1095028056905574 0.9469337358103124 1.0 12.35572017196699 -5.909233258581218 0.6666268457561166 1.0529764965327786 0.9081353911228435 0.10575835923789656 0.07399701538022158 1.7342972394690248 0.8449581391966673 0.011683155044824721 0.1605579824250472 1.2324427132472422e-06 5.909233258581218 -0.1448411054099351 MSGS(ph)ASSENR ddPTM_A549_PD325901_60min_R1 3 MSGSASSENR 10 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 MS(0.06)GS(0.466)AS(0.466)S(0.008)ENR;MS(0.09)GS(0.542)AS(0.359)S(0.01)ENR;MS(0.113)GS(0.476)AS(0.396)S(0.015)ENR 49.5 0.010308 42687000.0 3351.99 3218.9799999999996 3269.29 2802.01 3027.26 3267.9 2969.05 3252.2700000000004 3522.8 3762.4 3546.0299999999997 True False 3692.2815571953824 3490.254741611293 3491.163679237829 2975.0837938735767 2814.6357010800475 3241.287305868793 3082.0388224764997 3187.400923493544 3374.748966866995 3524.841421904801 3109.8907901362227 1.1872704883741751 1.122307816300652 1.1226000894664554 0.9566521767612486 0.9050593384202916 1.0422511671951074 0.9910440688952608 1.024923747677302 1.085166391556525 1.1334293259058148 1.0 11.602648202865133 -6.10109698873523 5.649252597188557 1.0225266988813302 1.1474929362121966 0.47841080238814826 0.05919041954219913 0.14844002833688844 6.764675678689611 0.007997452492309121 0.021771581153746226 7.923243650278432e-07 6.10109698873523 0.12496623733086643 MSGSAS(ph)SENR ddPTM_A549_MK2206_60min_R1 7 MSGSASSENR 10 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 MSGS(0.002)AS(0.964)S(0.034)ENR;MSGS(0.004)AS(0.736)S(0.26)ENR;MS(0.027)GS(0.088)AS(0.823)S(0.061)ENR;MS(0.04)GS(0.141)AS(0.658)S(0.16)ENR;MS(0.003)GS(0.192)AS(0.749)S(0.055)ENR;MS(0.001)GS(0.028)AS(0.944)S(0.027)ENR;MS(0.002)GS(0.035)AS(0.921)S(0.042)ENR 128.97 4.9523e-07 702196000.0 9146.630000000001 9322.86 9365.769999999999 6968.360000000001 8754.769999999999 9336.34 8325.92 8882.76 8678.06 13237.1 11679.039999999999 True False 10690.35753036653 9797.353752845345 10693.97701802802 8675.60851282157 7466.954930373689 10324.305301839084 9838.631891545883 10141.9184323116 6712.493266014192 10246.829916434783 8778.812042893785 1.2177453484745797 1.116022726648538 1.2181576465900656 0.9882440209941894 0.8505655314055836 1.176048108946168 1.120724745383972 1.1552723059518302 0.764624328806285 1.1672228390775627 1.0 13.099810010780208 -8.74966988085679 24.999652876516944 0.8888503731624664 1.0999368152986093 0.05268909440847458 0.14056374530719096 178.98112863738885 380174.4059855665 0.022249733277837788 0.025128684856034644 1.7796316428449877e-09 8.74966988085679 0.21108644213614292 MSGSAS(ph)SENR ddPTM_A549_PD325901_60min_R1 6 MSGSASSENR 10 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 MSGS(0.043)AS(0.953)S(0.004)ENR;MSGS(0.006)AS(0.984)S(0.01)ENR;MSGSAS(0.865)S(0.135)ENR;MS(0.004)GS(0.154)AS(0.828)S(0.015)ENR;MS(0.002)GS(0.03)AS(0.782)S(0.186)ENR;MSGS(0.001)AS(0.499)S(0.499)ENR 123.67 2.7181e-05 1032026000.0 27494.75 25524.629999999997 26915.34 28663.54 31901.32 28818.73 26487.11 29684.58 30642.46 31938.67 31755.25 True False 30285.996779434827 27675.680148796782 28741.976827487655 30434.021766177484 29660.681336779446 28584.039817699475 27495.091465352736 29092.497764797485 29354.66396822505 29922.05692551248 27849.555563115195 1.0874858204037745 0.9937566179853621 1.0320443628750187 1.0928009855383558 1.0650324838958278 1.026373284590475 0.9872721811678775 1.0446305937940525 1.0540442522215063 1.0744177535508743 1.0 14.765366684062482 -7.32526477571232 8.842856969846515 1.0245512410366533 1.0517601858510406 0.08445924728171816 0.033904809838531114 0.6613571269304848 87.50528511483095 0.005043991558021788 0.00807289257719061 4.728628814082764e-08 7.32526477571232 0.027208944814387293 MSGSASS(ph)ENR ddPTM_A549_MK2206_60min_R1 2 MSGSASSENR 10 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 MSGSAS(0.241)S(0.759)ENR;MSGSAS(0.267)S(0.732)ENR 125.74 1.1844e-05 146766000.0 6252.700000000001 5997.2 5378.0 4711.299999999999 4659.3 4348.4 4302.6 5023.8 5404.8 7744.4 7163.5 True False 7308.002896162058 6302.431863887706 6140.681268379932 5865.568711498292 3973.9231421373875 4808.544801765691 5084.326726243507 5735.939034742245 4180.621429692068 5994.93466128061 5384.605247457809 1.3572030929495393 1.1704538353787814 1.140414382517471 1.0893219543377959 0.7380156872249019 0.8930171443925088 0.9442338839312185 1.0652478261893588 0.7764025843242328 1.113347104527477 1.0 12.394624867424112 -6.1400622730831 1.373606027742071 0.9011749329433257 1.2911377540087334 0.5261856483044913 0.11870150738504533 0.24131669988058804 0.8082062704153252 0.016851420497439193 0.08190565338616546 7.243320913213432e-07 6.1400622730831 0.3899628210654077 MSGSASS(ph)ENR ddPTM_A549_PD325901_60min_R1 1 MSGSASSENR 10 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 MSGSAS(0.244)S(0.756)ENR 152.54 2.1831000000000002e-08 86805000.0 14733.0 15289.0 15333.0 15477.0 19435.0 17087.0 17211.0 17665.0 18607.0 19755.0 19275.0 True False 16228.683314138652 16577.457686750175 16373.589584819236 16432.979139182706 18069.952647110153 16947.849137176803 17865.97402322058 17312.657717075577 17825.012497585507 18507.6659285906 16904.297194292125 0.9600330098087959 0.9806653004389729 0.9686051656940765 0.9721184471798944 1.0689561618220733 1.0025763829388532 1.0568894889787652 1.0241572020469054 1.0544663462024477 1.0948497719763153 1.0 14.045102416166033 -6.726172989973786 21.38203906294536 1.0292644870679513 0.9709664901038321 0.5716891567745362 0.028747163874474884 21.687948877898656 13148.777459579915 0.003441226935930309 0.007162765189314519 1.8785683886264555e-07 6.726172989973786 -0.05829799696411919 MSGSASS(ph)ENREGTLSDSTGSEK ddPTM_A549_MK2206_60min_R1 1 MSGSASSENREGTLSDSTGSEK 22 1 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4;O43493-6 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 MS(0.023)GS(0.091)AS(0.375)S(0.478)ENREGT(0.023)LS(0.007)DS(0.002)T(0.001)GSEK 50.498999999999995 0.0024558 10261000.0 1449.2 1913.9 1793.6 1625.1 1785.8 1201.0 1144.6 1067.3 2181.6 2840.1 2460.7 True False 1693.7895304617293 2011.3093350721456 2047.9594501610718 2023.2495729535108 1523.1111856349562 1328.089022840722 1352.5590040576196 1218.5930434691659 1687.4710832993278 2198.519437464886 1849.6402781349095 0.9157399687303887 1.0874056749565681 1.1072204008371498 1.0938611128179263 0.8234634613227552 0.718025574237551 0.7312551635291359 0.6588270475478281 0.9123239276562979 1.1886200054433123 1.0 10.853029004369798 -6.754862803714182 24.996534313709024 0.8908586954689467 1.057664844778779 0.26211386560846195 0.1475721404538709 183.83649063060213 698726.8969380715 0.020750668653150957 0.04241271272052528 1.7584790405180053e-07 6.754862803714182 0.1668061493098324 MSKPGS(ph)PGSVIPAQAHGK ddPTM_A549_MK2206_60min_R1 1 MSKPGSPGSVIPAQAHGK 18 1 Q8IZD2-6;Q8IZD2-5;Q8IZD2-7;Q8IZD2;Q8IZD2-2 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 MS(0.092)KPGS(0.817)PGS(0.092)VIPAQAHGK 63.056000000000004 0.00083814 4032200.0 1537.9 1725.7 1462.9 1521.0 1564.2 1357.1 1403.1 1313.1 2360.4 1780.4 2342.3 True False 1797.4599219549368 1813.530758939341 1670.3612174624393 1893.6450682802856 1334.108252083211 1500.707421229928 1658.0251079794214 1499.2359462000964 1825.773168784258 1378.2064034584987 1760.6422658086724 1.0209114917103015 1.0300393181271135 0.9487226621219578 1.0755422069857696 0.7577395351635774 0.8523636234193465 0.9417160658800166 0.8515278630502996 1.0369926953591964 0.7827861628810104 1.0 10.781886091178182 -8.796849200802551 24.999892579180532 1.0174687918983851 0.9347269803289059 0.0 0.11175400924468551 244.71271940080584 172769.9521699679 0.01542518119104416 0.01642166505089218 1.5964333773523983e-09 8.796849200802551 -0.08274181156947924 MSPAS(ph)PIDDIER ddPTM_A549_MK2206_60min_R1 1 MSPASPIDDIER 12 0 B4DWJ3;Q96CJ1-2;Q96CJ1 B4DWJ3 EAF2 ELL-associated factor 2 1 MS(0.265)PAS(0.735)PIDDIER 41.54 0.033168 597920.0 168.12 0.0 237.99 162.71 302.31 264.81 288.8 0.0 150.15 399.96 213.28 True False 196.49454586063078 0.0 271.7405606288101 202.57395730432947 257.84059946763546 292.8320184333485 341.2712217122494 0.0 116.14126474027968 309.60875821571597 160.31668977145276 1.2256649394442531 0.0 1.6950235251002441 1.2635862029905844 1.6083203803372728 1.8265847358176457 2.1287317134526993 0.0 0.7244489947107222 1.931232229514555 1.0 7.324780814874994 -8.258814671138643 24.987370007993565 0.8010020589150864 1.3706634027095737 0.09886348128466116 0.6619472659720946 312.4325931365079 2974377.6611121283 0.09456869535517018 0.11927500203380918 5.51042795747563e-09 8.258814671138643 0.5696613437944873 MSPAS(ph)PIDDIER ddPTM_A549_PD325901_60min_R1 2 MSPASPIDDIER 12 0 B4DWJ3;Q96CJ1-2;Q96CJ1 B4DWJ3 EAF2 ELL-associated factor 2 1 MS(0.017)PAS(0.983)PIDDIER;MS(0.082)PAS(0.918)PIDDIER 54.7 0.0071127 1761180.0 544.53 601.8199999999999 593.16 606.94 536.03 634.12 433.90999999999997 542.42 356.41 372.75 624.55 True False 599.810284738201 652.5374834874738 633.4154045608408 644.4293053392485 498.38110200311047 628.9559369618156 450.4226824946627 531.6010075797418 341.43132714916146 349.2145013860872 547.7343093486461 1.095075248164539 1.1913394365663479 1.1564282057008348 1.17653631393949 0.909895716767815 1.1482865437254726 0.8223379014367307 0.9705453876203416 0.623352091190315 0.6375618533032295 1.0 9.097332441470138 -7.575565507417175 1.1335745441541532 0.8263118182107327 1.1428206244463721 0.5512475581435063 0.13252193264905876 0.32452073972339307 0.8377559627851979 0.02654253884387916 0.04840206300708859 2.657262707377614e-08 7.575565507417175 0.3165088062356394 MSPMGT(ph)ASGSNSPTSDSASVQR ddPTM_A549_MK2206_60min_R1 1 MSPMGTASGSNSPTSDSASVQR 22 0 Q5QPB1;O76080 Q5QPB1 ZFAND5 AN1-type zinc finger protein 5 1 MS(0.323)PMGT(0.666)AS(0.011)GSNSPTSDSASVQR 90.367 8.473100000000001e-07 3942100.0 765.46 673.19 452.26 549.09 687.4 725.97 570.22 427.35 1259.8 867.06 641.0 True False 894.6509342997763 707.4524955730278 516.397268582653 683.6170746495872 586.2843705932736 802.7916635401152 673.8215929527665 487.92817120448643 974.4573114872079 671.1905438006768 481.8220092999871 1.8568079436627767 1.4682859685070155 1.0717594020515968 1.4188166199439023 1.2168069521046874 1.666158141481431 1.398486536411496 1.012673065544205 2.022442505071414 1.393025911738264 1.0 8.912356486179487 -7.243046559396474 24.06629794685374 1.4593141565395273 1.3920163484736632 0.0 0.3211172654140006 4216.495282507116 5517116.407918085 0.06140741012176249 0.10621063171036613 5.71417373461499e-08 7.243046559396474 -0.06729780806586416 MSPNETLFLES(ph)TNK ddPTM_A549_MK2206_60min_R1 2 MSPNETLFLESTNK 14 0 Q9HB90;Q9NQL2 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D 1 MSPNETLFLES(0.857)T(0.143)NK;MSPNETLFLES(0.9)T(0.1)NK 120.3 2.3208000000000003e-06 5689100.0 3633.3 3201.7999999999997 3541.3 2900.6 4231.2 2991.9 3632.8 3706.1 5037.4 4622.799999999999 4218.1 True False 4246.512214343503 3364.757944006476 4043.5095901290156 3611.2471302128824 3608.7960850367485 3308.500872137516 4292.832736275136 4231.45102445524 3896.436943074824 3578.5062693259647 3170.629356362365 1.3393278548380971 1.0612271463564675 1.2753018835251366 1.1389685530307567 1.1381955061367024 1.0434839586337932 1.3539371064173409 1.3345776339212183 1.2289159359658397 1.1286422558805653 1.0 11.63055352224537 -10.635905937076972 0.9808568654694942 1.0036526576189853 1.2075081918796302 0.18323202150779583 0.10963014644344436 0.46903176686036396 0.825220950426229 0.06379326151333731 0.01847819728273708 2.3125656096307765e-11 10.635905937076972 0.20385553426064495 MSPNETLFLES(ph)TNK ddPTM_A549_PD325901_60min_R1 3 MSPNETLFLESTNK 14 0 Q9HB90;Q9NQL2 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D 1 MSPNETLFLES(0.809)T(0.191)NK;MSPNETLFLES(0.903)T(0.097)NK;MSPNETLFLES(0.835)T(0.165)NK 132.05 8.149800000000001e-09 8893400.0 6514.9 6307.3 6588.6 7125.8 7650.0 6552.4 6647.2 7003.7 6961.1 6594.599999999999 7646.7 True False 7176.287851984103 6838.838306471279 7035.742016470361 7565.944482134009 7112.690391067285 6499.039426841299 6900.162833487408 6864.00570920364 6668.549174877329 6178.2158305585235 6706.20437642509 1.0700968012862146 1.019777794203894 1.0491392181848385 1.1282007015371078 1.0606134247967676 0.9691084646462527 1.0289222406856786 1.0235306477287336 0.9943850202835849 0.9212686467291914 1.0 12.711280735637802 -7.18704941055191 7.84783388544202 1.0003592993792791 1.0658556590324946 0.5020509140557986 0.03686223382447483 0.18077444975021728 17.32465617201142 0.004151615615794858 0.007205451206792281 6.500557279952912e-08 7.18704941055191 0.06549635965321543 MSPNETLFLEST(ph)NK ddPTM_A549_MK2206_60min_R1 1 MSPNETLFLESTNK 14 0 Q9HB90;Q9NQL2 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D 1 MSPNETLFLES(0.385)T(0.615)NK 122.34 1.7284e-06 2614700.0 1884.4 2100.1 2351.9 1552.8 2451.8 1644.9 1615.5 2255.3 2469.2 1947.5 2358.4 True False 2202.4406508432817 2206.9861197476416 2685.4347852552546 1933.2360697078418 2091.1434678798214 1818.962226203749 1909.0154386292897 2574.995681566579 1909.930142502155 1507.5583974025074 1772.7441914712772 1.242390561164598 1.2449546473571962 1.5148461905417363 1.0905330159922089 1.1796081340671554 1.0260714630767531 1.0768702262930079 1.4525478035437696 1.0773862081686028 0.8504094412805941 1.0 10.791768653768452 -2.000132849415194 0.055514523364408354 0.6326797697163182 2.286613898944607 0.35934865215686274 0.14951525673575658 276.55930724197674 1.1208945268879826 7.139288139134072 37.62328613279889 0.009996941496987039 2.000132849415194 1.653934129228289 MSQPGS(ph)PSPK ddPTM_A549_MK2206_60min_R1 10 MSQPGSPSPK 10 0 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 MSQPGS(0.772)PS(0.228)PK;MSQPGS(0.916)PS(0.084)PK;MS(0.003)QPGS(0.954)PS(0.043)PK;MSQPGS(0.974)PS(0.026)PK;MS(0.005)QPGS(0.809)PS(0.186)PK;MS(0.002)QPGS(0.995)PS(0.003)PK;MSQPGS(1)PSPK;MSQPGS(0.999)PS(0.001)PK;MSQPGS(0.834)PS(0.166)PK;MSQPGS(0.987)PS(0.013)PK 171.2 1.7609e-10 804554500.0 31836.080000000005 36790.73 34563.439999999995 35476.29 51984.700000000004 40995.450000000004 38937.4 38689.42 60714.6 61365.4 62407.50000000001 True False 37209.23198657333 38663.221011086716 39465.05551855218 44167.98264259118 44337.819493715695 45333.56130842271 46011.82156613071 44173.76376637949 46962.84004129329 47502.91351987878 46909.99539062235 0.7932047674856887 0.8242000599048401 0.8412931016071157 0.9415473669268507 0.9451678501460511 0.9663944950522254 0.9808532527660151 0.9416706055616059 1.0011265115298114 1.0126394838524106 1.0 15.51760773862409 -5.811141936658725 0.5170563549295657 0.9989526877052592 0.7039965998875021 0.9295009821958649 0.019436393421659818 0.4183949237217724 0.10442918087678134 0.0037652751221989387 0.06661427125051612 1.544749500091783e-06 5.811141936658725 -0.2949560878177572 MSQPGS(ph)PSPK ddPTM_A549_PD325901_60min_R1 10 MSQPGSPSPK 10 0 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 MSQPGS(0.99)PS(0.01)PK;MSQPGS(0.722)PS(0.278)PK;MSQPGS(0.971)PS(0.029)PK;MSQPGS(0.992)PS(0.008)PK;MSQPGS(0.974)PS(0.025)PK;MS(0.002)QPGS(0.757)PS(0.241)PK;MS(0.002)QPGS(0.984)PS(0.014)PK;MS(0.004)QPGS(0.983)PS(0.013)PK;MSQPGS(0.902)PS(0.097)PK;MSQPGS(1)PSPK 162.65 6.571600000000001e-09 1316964800.0 62531.409999999996 60163.740000000005 61011.170000000006 65255.649999999994 72509.17 67096.96 64825.46 68543.24 69496.73000000001 69480.59999999999 73006.93000000001 True False 68879.55271000895 65233.949514463864 65151.75488616944 69286.343294166 67416.37604225671 66550.54460368617 67292.42835415278 67176.0913070685 66576.0241194886 65093.583058366574 64027.54043905997 1.0757800820971255 1.0188420337112922 1.0175582950617863 1.0821334509969385 1.0529277804513226 1.0394049833450583 1.0509919308582572 1.0491749463811633 1.0398029295355211 1.0166497512163728 1.0 15.966404970732167 -10.300244022049842 0.6040488177886749 0.9976609777303607 1.047902213360522 0.374355562526687 0.019262311357891835 0.6113006680842005 0.3926504769697851 0.015484250061813164 0.004192635665569188 5.009057048757663e-11 10.300244022049842 0.05024123563016136 MSS(ph)LKLK ddPTM_A549_PD325901_60min_R1 1 MSSLKLK 7 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 MS(0.103)S(0.897)LKLK 48.423 0.012987 12461000.0 3780.0 4114.8 3176.1 3662.3 4609.1 4608.3 4481.3 5072.8 5223.9 4784.3 4435.7 True False 4163.742817311077 4461.568636891855 3391.6492454408362 3888.511953313229 4285.372716531793 4570.771532676996 4651.838323761452 4971.619024465384 5004.357649601598 4482.218481506256 3890.137020219018 1.0703332030902744 1.146892413738338 0.8718585560901101 0.9995822597257262 1.1015994280557562 1.174964148799997 1.195803206823689 1.2780061469879738 1.286421949558951 1.152200670107477 1.0 11.925605256045554 -6.958522181334373 3.898316090360685 1.1574669451995798 1.0210974146043275 0.3672457793786108 0.09482212943127492 0.2874000074849168 9.366906833796353 0.018747086903548045 0.03599728683925272 1.1002156509955984e-07 6.958522181334373 -0.13636953059525236 MSS(ph)PEDDSDTKR ddPTM_A549_MK2206_60min_R1 4 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 MS(0.445)S(0.555)PEDDSDTKR;MS(0.157)S(0.842)PEDDS(0.001)DTKR;MS(0.033)S(0.967)PEDDSDTKR;MS(0.155)S(0.843)PEDDS(0.001)DTKR 85.90899999999999 0.00014903 43178300.0 7741.23 7720.72 8014.73 6709.42 10019.1 7579.629999999999 6908.35 7523.58 10551.460000000001 10604.41 12161.099999999999 True False 9047.760369097607 8113.671670138579 9151.339230591799 8353.228201197311 8545.303662221511 8381.701415648808 8163.507771869178 8590.070504997426 8161.57115721926 8208.866415917395 9141.163240714615 0.9897821678535403 0.8875972845556895 1.0011132051369414 0.9138036354051908 0.9348157818865817 0.9169184703229918 0.893049118246683 0.9397130626370799 0.8928372617685827 0.8980111392558024 1.0 13.158162048941897 -10.973484112014953 1.2418535906483246 1.0000049230244215 0.9257211305964383 0.0 0.046290585763667395 0.3785928756678433 1.0383175444933137 0.023756184195160852 0.005479511790157252 1.0629574692025628e-11 10.973484112014953 -0.07428379242798311 MSS(ph)PEDDSDTKR ddPTM_A549_PD325901_60min_R1 3 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 MS(0.105)S(0.895)PEDDSDTKR;MS(0.166)S(0.805)PEDDS(0.023)DT(0.005)KR;MS(0.263)S(0.727)PEDDS(0.003)DT(0.007)KR 73.848 0.00022505 33126000.0 9783.8 8686.8 9637.3 9092.7 10250.7 9909.6 8507.7 9193.2 9726.7 10571.3 12224.2 True False 10777.044173547114 9418.86712232725 10291.345131792757 9654.335427980013 9530.726194995223 9828.899503117409 8831.465179092074 9009.83441407412 9317.920624510389 9903.826313890653 10720.700895588372 1.00525555917542 0.8785682218037784 0.959950774862836 0.9005321127793824 0.8890021545995346 0.916815010403103 0.8237768467849216 0.8404146801429481 0.8691521865277264 0.923803994752445 1.0 13.388111608622607 -10.794971951947685 1.090514573318977 0.9988432538726861 0.8947062713648155 0.12349286598199327 0.053087275488576925 0.4147838263154328 0.8907416670361421 0.03198252314909553 0.008381349855907062 1.603348936474246e-11 10.794971951947685 -0.10413698250787062 MSS(ph)PLADAK ddPTM_A549_PD325901_60min_R1 2 MSSPLADAK 9 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 MS(0.033)S(0.967)PLADAK;MS(0.081)S(0.919)PLADAK 129.88 4.998e-05 33768000.0 9765.7 9419.0 9559.8 9526.099999999999 11633.8 10108.5 10358.2 9957.9 10128.9 10153.7 11820.5 True False 10757.106674871626 10212.77218598337 10208.585515747405 10114.505561657194 10816.682022431194 10026.179727462491 10752.386969224523 9759.281872678577 9703.217557198566 9512.593649158718 10366.653436323222 1.0376643476071374 0.9851561305405777 0.9847522711599511 0.9756770228488068 1.0434111730340225 0.9671568350430466 1.0372090699540266 0.9414110284118783 0.9360028881837532 0.9176147063842218 1.0 13.339662617959439 -8.271560023478852 24.941047262469596 0.9668071276548508 1.001893615342839 0.356006799428475 0.032799504449554845 840.1680031356375 2070484.3862855502 0.00540523179972032 0.006571408483516573 5.351061920789096e-09 8.271560023478852 0.03508648768798828 MSSEGPPRMS(ph)PK ddPTM_A549_MK2206_60min_R1 6 MSSEGPPRMSPK 12 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 MS(0.017)S(0.078)EGPPRMS(0.905)PK;MS(0.005)S(0.023)EGPPRMS(0.972)PK;MS(0.041)S(0.039)EGPPRMS(0.92)PK;MS(0.003)S(0.024)EGPPRMS(0.972)PK;MS(0.001)S(0.001)EGPPRMS(0.997)PK;MS(0.005)S(0.005)EGPPRMS(0.989)PK 65.704 0.0015997 97060600.0 12170.5 12874.5 12404.3 10867.070000000002 16198.9 12939.710000000001 13592.8 12833.800000000001 19212.8 20171.4 19833.699999999997 True False 14224.582859843009 13529.757058564377 14163.416262061215 13529.502637841308 13816.063268553075 14308.981523515673 16062.435811946905 14653.030451864122 14861.131476537097 15614.666730354273 14908.444907727231 0.9541292165536482 0.9075230275393604 0.9500264011251865 0.9075059619953252 0.9267273249533919 0.9597903478248863 1.077405182858579 0.9828678002673019 0.9968264006418529 1.047370589420832 1.0 13.863842158236103 -7.529080138505918 24.999985404906173 1.0031251649367232 0.9294654371115973 0.6642498632542255 0.030056342489183468 72.1317271760769 290787.36731452664 0.003856555327969412 0.005728565145079154 2.9574666875011492e-08 7.529080138505918 -0.07365972782512586 MSSEGPPRMS(ph)PK ddPTM_A549_PD325901_60min_R1 6 MSSEGPPRMSPK 12 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 MS(0.007)S(0.008)EGPPRMS(0.985)PK;MS(0.002)S(0.005)EGPPRMS(0.992)PK;MS(0.003)S(0.005)EGPPRMS(0.992)PK;MS(0.151)S(0.109)EGPPRMS(0.74)PK;MSSEGPPRMS(1)PK;MSSEGPPRMS(1)PK 94.45 7.2985e-05 302369000.0 43631.799999999996 43765.9 45597.1 42712.100000000006 48515.5 47668.3 46814.5 47693.4 48029.8 45118.6 48535.3 True False 48061.26821596649 47454.20598943939 48691.59340363667 45350.32941078285 45107.93864938885 47280.10516917452 48596.051415377384 46742.11772225152 46011.27453412864 42269.80389601154 42565.765790616184 1.1291061566326106 1.114844408599854 1.1439144227582756 1.0654179143367024 1.0597234141464242 1.1107542479500658 1.1416698492968405 1.0981152777135288 1.08094553638389 0.9930469500757838 1.0 15.377405965400836 -10.19102685427386 0.49018481742677317 0.9891166169595468 1.1106526416278129 0.722128712124928 0.02615098358928069 0.5225691906470651 0.21998835410131728 0.028753365717398442 0.007560508683139946 6.441294350227951e-11 10.19102685427386 0.12153602466826607 MSSRS(ph)PR ddPTM_A549_MK2206_60min_R1 3 MSSRSPR 7 1 Q9HB15 Q9HB15 KCNK12 Potassium channel subfamily K member 12 1 MS(0.01)S(0.01)RS(0.98)PR;MS(0.144)S(0.144)RS(0.712)PR;MS(0.036)S(0.036)RS(0.928)PR 55.111999999999995 0.025936 112101000.0 7197.700000000001 7983.3 8174.4 6420.7 9242.0 6805.0 6343.5 6443.6 10042.0 10641.599999999999 10228.0 True False 8412.49579313027 8389.615870568712 9333.652837531588 7993.771788236173 7882.514042803372 7525.100583206588 7496.031838406005 7357.000032697385 7767.503033778814 8237.655169087822 7688.10532156048 1.0942222356837794 1.0912462199289752 1.2140381078490619 1.0397583609863517 1.025286948228674 0.9787978010789262 0.9750167986622367 0.9569327844749285 1.0103273445013392 1.0714805305783452 1.0 12.908412384802395 -6.475963296752289 5.384595578761846 0.9991384086976381 1.1297903773044924 0.6551103186190053 0.041293880547200755 0.07698063116959301 5.2606308510974005 0.004865865563702258 0.011284542255745617 3.342232848281548e-07 6.475963296752289 0.13065196860685424 MSSRS(ph)PR ddPTM_A549_PD325901_60min_R1 3 MSSRSPR 7 1 Q9HB15 Q9HB15 KCNK12 Potassium channel subfamily K member 12 1 MS(0.006)S(0.006)RS(0.988)PR;MS(0.024)S(0.024)RS(0.951)PR;MS(0.044)S(0.044)RS(0.912)PR 67.993 0.014677 154774000.0 16997.4 18906.600000000002 21813.5 19268.199999999997 27777.600000000002 22699.5 21143.4 23573.4 22920.3 21234.4 22575.7 True False 18722.963535175477 20499.925534718477 23293.895285231476 20458.35295274279 25826.597203517733 22514.642797995235 21948.023657112415 23103.210044025458 21957.039498490285 19893.656360114637 19799.032019153346 0.9456504498332599 1.0354003930539177 1.1765168753046735 1.0333006650502723 1.3044373673689396 1.1371587649444093 1.1085402375166704 1.1668858367255373 1.1089956053027898 1.0047792407664047 1.0 14.27314227776826 -10.368977825853072 0.8489406837715111 1.0033586777425056 1.1172542012733226 0.18643926019646728 0.08796112260054342 0.7486755088665321 1.017602296738972 0.04913607289947827 0.016745866389486757 4.275847171549568e-11 10.368977825853072 0.113895523530817 MSTNNMS(ph)DPR ddPTM_A549_PD325901_60min_R1 1 MSTNNMSDPR 10 0 A0A0A0MQS5;Q9Y284 A0A0A0MQS5 WDR83OS Protein Asterix 1 MS(0.004)T(0.004)NNMS(0.993)DPR 40.589 0.027655000000000002 5028700.0 594.65 553.74 528.39 596.12 516.38 673.11 742.82 791.08 572.93 607.78 727.67 True False 655.0184302418069 600.4056131506986 564.2497228671908 632.9409785132515 480.11125021429075 667.628415328909 771.0884215867013 775.3012888097458 548.8517445177439 569.4046670756163 638.1712030801845 1.0263992281072978 0.9408221653574979 0.8841666940529349 0.9918043550983046 0.7523235894960402 1.0461587926665241 1.2082783081796566 1.2148797768807054 0.8600384064161262 0.8922443763167925 1.0 9.317799699503292 -5.245361416662589 20.97322176192987 0.9639625668299688 1.026399585081349 0.0 0.13454210548548487 1464.646546604735 1910270.3291595594 0.019213199251545524 0.5243952799182218 5.683797325565049e-06 5.245361416662589 0.06243701825138015 MSVS(ph)ADER ddPTM_A549_MK2206_60min_R1 1 MSVSADER 8 0 Q9Y2K1-2;Q9Y2K1 Q9Y2K1-2 ZBTB1 Zinc finger and BTB domain-containing protein 1 1 MS(0.137)VS(0.863)ADER 72.042 0.0058419 6874600.0 1036.4 1011.8 766.19 896.54 997.99 728.12 739.65 614.54 1195.3 1080.5 1279.7 True False 1211.318982452758 1063.2962982527808 874.8472631126851 1116.1923402472098 851.1869930293586 805.1691751130606 874.0348308153234 701.6529269498184 924.5664585018741 836.4142995601597 961.9151720767442 1.25927838297587 1.105395079648404 0.9094848366139374 1.1603854192645555 0.8848877923317012 0.8370480043211358 0.9086402379206787 0.7294332674210472 0.9611725496602415 0.8695302079021874 1.0 9.909765863166903 -4.762220826522346 0.8997200542581537 0.9465651837270659 1.7861315961130766 0.49025264614141195 0.10532131579515693 3.2754132121362147 1.0652499221170375 0.016258753253146973 3.3453479464239555 1.728937019854688e-05 4.762220826522346 0.8395664123860107 MT(ph)NNEDSLSPTSSTLSNLELDAAEK ddPTM_A549_PD325901_60min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEK 25 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.242)NNEDS(0.159)LS(0.126)PT(0.115)S(0.115)S(0.115)T(0.115)LS(0.013)NLELDAAEK 51.025 0.0020753 1235800.0 362.1 354.63 257.16 452.24 328.44 342.25 309.49 634.33 336.97 508.63 535.79 True False 398.8601254360687 384.51591467409344 274.61242402870363 480.17383768843985 305.37150745648876 339.462829472626 321.2678113094264 621.6777905277415 322.80832274474045 476.5150149966612 469.89122665264745 0.8488350128973864 0.8183083506650252 0.584417006431368 1.0218829602524022 0.6498770143717223 0.7224285328561016 0.6837067667724592 1.3230248944130587 0.6869852094160646 1.0140964290633803 1.0 8.876183021180749 MT(ph)SERAPSPSSR ddPTM_A549_MK2206_60min_R1 1 MTSERAPSPSSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MT(0.498)S(0.498)ERAPS(0.003)PS(0.001)S(0.001)R 40.025 0.031382 5540100.0 275.82 291.67 447.66 378.5 252.37 305.22 125.64 122.23 289.27 507.15 602.25 True False 322.37167284843656 306.5147571767036 511.1449194129718 471.2325169915109 215.24670731251754 337.5181778113612 148.46716168949797 139.55647681367583 223.75080686926876 392.5844627690282 452.69470374558034 0.7121171734087995 0.6770893377824195 1.1291161906330611 1.0409499229669563 0.4754787399357088 0.745575715860485 0.3279631072797755 0.308279455577877 0.4942642470034712 0.8672168229952724 1.0 8.822394617799215 MTEEEVEMLVAGHEDS(ph)NGCINYEELVR ddPTM_A549_PD325901_60min_R1 1 MTEEEVEMLVAGHEDSNGCINYEELVR 27 0 G8JLA2;P60660-2;F8VXL3;F8VZU9;F8W180 G8JLA2 MYL6 Myosin light polypeptide 6 1 MTEEEVEMLVAGHEDS(1)NGCINYEELVR 93.04299999999999 1.4843000000000001e-09 2658000.0 1399.7 1404.1 868.01 1023.3 1248.0 1441.4 1423.6 1460.3 1284.1 1320.9 1323.2 True False 1541.796513595321 1522.4284346893787 926.9183783681564 1086.5069169170804 1160.3447853662713 1429.661716294648 1477.7758770238115 1431.1731709168114 1230.1337425780368 1237.498148573795 1160.4547884558933 1.3286140304068568 1.3119239541551888 0.7987544086930939 0.9362768181281682 0.9999052069148093 1.2319839863791355 1.273445455802847 1.2332864538575754 1.0600445229019726 1.066390660699859 1.0 10.180474600760187 -8.96894703458973 8.745008335541781 1.0263045281282144 1.1309261241591106 0.06779046439072389 0.15969990537517179 0.5089886316065892 125.26068791290886 0.03012988730868139 0.03144328102949812 1.0741204012464476e-09 8.96894703458973 0.10462159603089627 MTGS(ph)PTLVK ddPTM_A549_MK2206_60min_R1 1 MTGSPTLVK 9 0 B7ZBM3;Q8IVH2-3;Q8IVH2-2;Q8IVH2 B7ZBM3 FOXP4 Forkhead box protein P4 1 MT(0.003)GS(0.985)PT(0.012)LVK 60.518 0.0028566999999999998 3167500.0 1919.6 2521.8 2581.0 2317.5 2610.6 2153.2 2195.8 2121.7 2701.6 2857.7 3082.0 True False 2243.5815502859077 2650.148848521311 2947.0246102061365 2885.287604036527 2226.5841982409083 2381.0501948215174 2594.7484371044243 2422.4574724337385 2089.6919135686967 2212.143585241155 2316.654341127239 0.9684576203087011 1.1439552295193938 1.2721037221168572 1.2454545129216825 0.9611205947787168 1.0277969192689076 1.1200412556332724 1.0456706593764082 0.9020300855724092 0.9548872034853368 1.0 11.177827086075531 -7.784547050560801 0.8237987720201291 0.9568467978823356 1.1428266166143044 0.30378702636029764 0.09711297271244097 0.48039162614373393 0.657269698956683 0.020542346358865916 0.03655935293779535 1.6423017264834347e-08 7.784547050560801 0.18597981873196878 MTGSAPPPS(ph)PTPNK ddPTM_A549_MK2206_60min_R1 1 MTGSAPPPSPTPNK 14 0 Q9UBW7 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 MTGSAPPPS(0.99)PT(0.01)PNK 120.53 7.9679e-07 4047800.0 822.84 1056.5 1015.4 1027.6 1445.9 853.79 814.3 934.18 1261.0 1362.3 889.79 True False 961.715275493465 1110.2713373236443 1159.398988455371 1279.3620461307175 1233.2100253721485 944.1374911000661 962.2477695300718 1066.6028758062644 975.3855134032146 1054.555483841559 668.8305860452972 1.4379056454040993 1.660018785756383 1.733471842713918 1.9128342405741467 1.8438301882453505 1.4116242749641887 1.4387018022302327 1.59472801941212 1.4583446597000511 1.5767153982550346 1.0 9.385497014057893 -10.07826391621422 0.3504949585515145 0.8690911960403338 1.7111629660807806 0.11247029465818248 0.2239202498492311 0.7905643336871059 0.17341999938423192 0.25520657973453065 0.06894171586613244 8.350953852741627e-11 10.07826391621422 0.8420717700404468 MTGSAPPPS(ph)PTPNK ddPTM_A549_PD325901_60min_R1 4 MTGSAPPPSPTPNK 14 0 Q9UBW7 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 MTGSAPPPS(0.981)PT(0.018)PNK;MTGSAPPPS(0.979)PT(0.021)PNK;MTGSAPPPS(0.958)PT(0.042)PNK;MTGSAPPPS(0.979)PT(0.021)PNK 114.69 1.4984000000000001e-06 10146700.0 2827.5 2383.2 2335.7 2163.02 2050.67 2280.29 2616.5 2990.4 2879.5 2792.6 3420.7 True False 3114.545718504515 2584.040627841128 2494.2146477050983 2296.6248328251577 1906.6380136274456 2261.720074267741 2716.0723393037397 2930.754126076581 2758.484628730985 2616.2747594119032 2999.975585603895 1.0381903550983589 0.8613538857586938 0.8314116487061387 0.7655478410711289 0.6355511767418732 0.7539128268647082 0.9053648144129794 0.9769259923782414 0.919502359275268 0.8720986837248701 1.0 11.55073504449274 -7.953594343305585 4.8570840126901675 0.9613638548490617 0.8073390386290153 0.27423862800403465 0.09653173178148461 0.1713304901475096 9.057222444316217 0.015586937954764263 0.02153462231527002 1.1127706354961749e-08 7.953594343305585 -0.15402481622004638 MTNNEDS(ph)LSPTSSTLSNLELDAAEKDR ddPTM_A549_MK2206_60min_R1 2 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.064)NNEDS(0.554)LS(0.374)PT(0.005)S(0.001)S(0.001)T(0.001)LSNLELDAAEKDR;MT(0.217)NNEDS(0.319)LS(0.319)PT(0.087)S(0.025)S(0.025)T(0.007)LS(0.002)NLELDAAEKDR 79.021 1.1118999999999999e-06 30646900.0 2142.7200000000003 2252.34 2126.58 1505.69 2927.8 2093.87 1871.28 2388.73 2947.33 2960.2 2651.0299999999997 True False 2504.3587515256413 2366.9744854780283 2428.1610211438065 1874.5841175929925 2497.1244984332066 2315.4419336015817 2211.267353759343 2727.339792678818 2279.7644609188706 2291.4887640518127 1992.7060862941412 1.2567627352325834 1.18781916799377 1.2185244165432776 0.9407228343840603 1.2531323688969798 1.1619585796055032 1.109680634273398 1.3686613452116683 1.1440545480335111 1.1499381568675395 1.0 10.960513220571473 -10.09777766350072 0.9319565472603938 1.0133563926445717 1.1789939811453096 0.07600490231574397 0.1093151405259623 0.4622370150494397 0.8035744517036351 0.04063755760395456 0.019083450177811077 7.984033242094614e-11 10.09777766350072 0.16563758850073795 MTNNEDS(ph)LSPTSSTLSNLELDAAEKDR ddPTM_A549_PD325901_60min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.046)NNEDS(0.457)LS(0.388)PT(0.069)S(0.024)S(0.007)T(0.007)LS(0.002)NLELDAAEKDR 61.941 0.00014228 51726000.0 1055.9 1032.2 1197.4 1146.8 1537.2 1098.2 1213.0 1251.5 1182.4 1263.5 1237.6 True False 1163.0941906875032 1119.1871165062155 1278.6627645511348 1217.6352314282303 1429.232375052109 1089.2566233070493 1259.1613787790684 1226.537850717243 1132.7078399067607 1183.7223943697418 1085.3830457927859 1.071597898268215 1.031144830246301 1.178075122425718 1.12184839826648 1.3167999818977905 1.0035688575837611 1.1601078381129044 1.1300506816202889 1.0436019286439173 1.0906033579187953 1.0 10.083988563037948 -8.891871570447332 2.418387617609732 1.0169028280699353 1.1289608347940046 0.14641635512214324 0.0816926435653233 0.25825234572203465 2.9444024179956476 0.014277902106265854 0.014837532188465175 1.2827098494975343e-09 8.891871570447332 0.11205800672406929 MTNNEDSLS(ph)PTSSTLSNLELDAAEKDR ddPTM_A549_MK2206_60min_R1 4 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.001)NNEDS(0.211)LS(0.741)PT(0.029)S(0.006)S(0.006)T(0.006)LSNLELDAAEKDR;MT(0.045)NNEDS(0.178)LS(0.727)PT(0.032)S(0.013)S(0.003)T(0.003)LSNLELDAAEKDR;MT(0.002)NNEDS(0.167)LS(0.638)PT(0.167)S(0.019)S(0.006)T(0.001)LSNLELDAAEKDR;MT(0.001)NNEDS(0.015)LS(0.781)PT(0.177)S(0.018)S(0.006)T(0.002)LSNLELDAAEKDR 102.4 7.4428e-13 63229500.0 4433.97 4673.69 4628.97 3593.61 5824.17 4969.610000000001 4766.47 3816.34 6666.4 6104.900000000001 5862.8 True False 5182.3157358414255 4911.56085805598 5285.427551300236 4474.044611323282 4967.442308231349 5495.490831639865 5632.475900812967 4357.31788205108 5156.471044053284 4725.798849962808 4406.904954951583 1.175953597551178 1.1145148144248873 1.1993513827343945 1.0152351042416428 1.1271952445105375 1.2470182333896607 1.2781024229906153 0.9887478687633626 1.1700890073110133 1.072362326456103 1.0 12.105550066573858 -10.89720566615942 0.6889163927694298 0.9774933922826322 1.1483685392458463 0.182464400750042 0.08516598692651847 1.0633451797611915 0.6931379778550806 0.1118524515444504 0.016078226401845915 1.2670516939026568e-11 10.89720566615942 0.17087514696321404 MTNNEDSLS(ph)PTSSTLSNLELDAAEKDR ddPTM_A549_PD325901_60min_R1 2 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MTNNEDS(0.03)LS(0.473)PT(0.473)S(0.018)S(0.004)T(0.001)LSNLELDAAEKDR;MTNNEDS(0.007)LS(0.839)PT(0.14)S(0.01)S(0.003)T(0.001)LSNLELDAAEKDR 121.2 3.6577e-18 77232000.0 2304.25 2257.92 2064.27 2223.88 2776.7 2645.5 2822.1000000000004 2200.6000000000004 2511.1 2658.3 2522.7 True False 2538.1757637008063 2448.2028425709295 2204.3637756639146 2361.244016802069 2581.6741710949714 2623.955925112731 2929.4965598123754 2156.7073066626967 2405.567199585475 2490.454484331684 2212.423892712879 1.1472375488534838 1.1065704228898638 0.9963568839246799 1.0672656467774384 1.1668985222941688 1.1860095769871797 1.324111789545095 0.9748164959555456 1.087299412878679 1.125667867055026 1.0 11.111412112063718 -9.645414920252806 0.7558866732086829 1.0119238414575698 1.1235174514170767 0.020446396020689317 0.0953351025120403 0.7272634748174911 0.8862287920481065 0.03562023377475122 0.020556794295392932 2.262481724123826e-10 9.645414920252806 0.11159360995950696 MTNNEDSLS(ph)PTSSTLSNLELDAAEKDRK ddPTM_A549_PD325901_60min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEKDRK 28 2 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MTNNEDS(0.005)LS(0.988)PT(0.005)S(0.001)STLSNLELDAAEKDRK 113.7 1.2439999999999999e-20 5079600.0 1225.0 1288.3 1359.2 1364.0 2036.4 2095.2 1580.2 1622.0 2032.3 2124.0 1565.7 True False 1349.361098202663 1396.869562289244 1451.4434855335744 1448.2511821312412 1893.370289198617 2078.137385861345 1640.3353757186183 1589.6479375656158 1946.8894985136244 1989.8902775158913 1373.1288257900483 0.9826908246764755 1.0172895186913988 1.057033730756083 1.054708891788045 1.378873018785576 1.5134322044879225 1.1945968542134633 1.1576830285031634 1.4178491208888977 1.4491650310894761 1.0 10.423251268930587 -6.61842131337991 8.19416424792038 1.2329852507439383 1.0249855954412066 0.39264987132981577 0.14929798049597956 0.2922280598220129 22.164176261079433 0.025854133237723616 0.05393110457246951 2.4075686891830724e-07 6.61842131337991 -0.20799965530273168 MTNNEDSLSPT(ph)SSTLSNLELDAAEKDR ddPTM_A549_PD325901_60min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MTNNEDS(0.023)LS(0.409)PT(0.555)S(0.009)S(0.003)T(0.001)LSNLELDAAEKDR 110.23 3.2327e-13 21229000.0 836.86 828.92 957.79 847.02 1147.4 1066.5 1135.2 1041.3 1175.0 1111.5 1393.4 True False 921.8174111362296 898.7759974949929 1022.7913890591537 899.3385016780084 1066.8105823151122 1057.8147775969485 1178.4006572052751 1020.5304546159527 1125.6188361725679 1041.3197003102232 1222.0206334903587 0.7543386632542505 0.735483487646106 0.8369673645671902 0.7359437942625409 0.8729890094147326 0.8656275913898424 0.9643050411018876 0.8351172039551363 0.9211127908352528 0.8521293927222702 1.0 10.255052929542874 -2.0000000066328245 0.10927706004382703 1.0748832439260683 0.012625758040405319 0.4433945233667669 0.062425036683753946 29.302411849639633 0.21636010026363053 0.20428622492267612 4.7166210477805075 0.009999999847273573 2.0000000066328245 -1.062257485885663 MTSERAPS(ph)PSSR ddPTM_A549_PD325901_60min_R1 3 MTSERAPSPSSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MT(0.011)S(0.038)ERAPS(0.859)PS(0.059)S(0.032)R;MT(0.004)S(0.038)ERAPS(0.883)PS(0.037)S(0.037)R;MT(0.003)S(0.003)ERAPS(0.486)PS(0.486)S(0.022)R 52.599 0.0055724 29241800.0 5472.55 5053.34 5449.24 5214.65 5278.38 8421.56 6468.360000000001 7175.88 6448.34 6274.37 7566.4 True False 6028.119247321618 5479.202696498274 5819.058195342092 5536.7470871705855 4907.64479822245 8352.977607519319 6714.516979422403 7032.751444031045 6177.338694506395 5878.205207409315 6635.780767361454 0.9084265226137878 0.8257058044244184 0.8769214052344122 0.834377638634998 0.7395730766695969 1.2587784166414924 1.0118654028548106 1.0598227534312343 0.9309136198245219 0.8858347515520213 1.0 12.696050508046717 MTSLETKT(ph)SDTETEPSK ddPTM_A549_PD325901_60min_R1 1 MTSLETKTSDTETEPSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MT(0.001)S(0.018)LET(0.102)KT(0.485)S(0.38)DT(0.014)ET(0.001)EPSK 75.646 0.00013302 46954000.0 2866.7 2824.7 3023.4 2498.1 3633.0 3387.0 2917.3 3314.7 4007.5 3447.1 3705.7 True False 3157.7252736469977 3062.747382285512 3228.5861051811444 2652.4019634032647 3377.830613169602 3359.4173949562714 3028.3194479078147 3248.5857081681556 3839.0787114566506 3229.4495177142353 3249.922392367748 0.9716309783466615 0.942406313910201 0.9934348317865341 0.8161431699514656 1.0393573154553595 1.0336915745574928 0.9318128503682565 0.9995887027324925 1.1812831963226265 0.9937005035253789 1.0 11.666189551885328 -8.538075477676887 23.90002355416144 1.0858601906458607 0.9622094887199656 0.22757546063723366 0.0736994408521876 124.06455469457195 195116.18951497137 0.013972000176394817 0.015846206649715918 2.8968400911791893e-09 8.538075477676887 -0.12365070192589511 MTSLETKTS(ph)DTETEPSK ddPTM_A549_MK2206_60min_R1 5 MTSLETKTSDTETEPSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MTSLETKT(0.024)S(0.975)DT(0.001)ETEPSK;MT(0.002)S(0.021)LET(0.015)KT(0.172)S(0.788)DT(0.002)ETEPSK;MT(0.036)S(0.036)LET(0.293)KT(0.293)S(0.335)DT(0.005)ET(0.001)EPSK;MTSLETKT(0.098)S(0.901)DT(0.001)ETEPSK;MTSLETKT(0.151)S(0.849)DTETEPSK 172.81 1.7891999999999997e-30 214613000.0 12121.600000000002 13829.5 12548.0 12688.400000000001 15032.0 13009.5 12866.300000000001 13193.1 16919.1 18970.5 17800.4 True False 14167.429735333228 14533.36247942956 14327.49508286191 15797.058569603918 12820.812712769983 14386.156654992812 15203.94016591522 15063.262327174236 13086.95086425086 14685.050874415547 13380.069413952398 1.0588457575982222 1.0861948492041855 1.0708087259937202 1.1806410027388305 0.9582022571124155 1.0751929762031944 1.1363125029875358 1.1257985187630377 0.9780928976798968 1.0975317406875593 1.0 13.70779798005088 -8.77187275974623 24.999865061386455 0.9896549713686583 1.0861114034355965 0.09414155924298395 0.062060620128252766 144.3321091047134 345839.30050308653 0.008911086056322725 0.009535563607658448 1.690936272141878e-09 8.77187275974623 0.09645643206693821 MTSLETKTS(ph)DTETEPSK ddPTM_A549_PD325901_60min_R1 6 MTSLETKTSDTETEPSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MTSLETKT(0.055)S(0.943)DT(0.002)ETEPSK;MTSLET(0.004)KT(0.169)S(0.826)DT(0.001)ETEPSK;MT(0.001)S(0.002)LET(0.01)KT(0.068)S(0.863)DT(0.052)ET(0.003)EPSK;MTSLETKT(0.067)S(0.932)DT(0.001)ETEPSK;MTSLETKT(0.041)S(0.848)DT(0.111)ETEPSK;MT(0.001)S(0.002)LET(0.006)KT(0.243)S(0.745)DT(0.003)ETEPSK 193.84 4.1974999999999997e-41 469528000.0 73146.5 67864.2 68821.3 74131.7 89513.2 91893.6 78322.20000000001 83217.09999999999 119689.3 86857.6 86666.1 True False 80572.27883239275 73583.35430343066 73491.92727409641 78710.64674369383 83226.10163577579 91145.24898882599 81302.79418055223 81557.26965794788 114659.17495175256 81373.39631278935 76006.71912167275 1.060067843520668 0.968116439622098 0.9669135587401079 1.0355748498720565 1.0949834777441996 1.1991735736273426 1.0696790378545538 1.073027103398447 1.5085399853689823 1.0706079311557382 1.0 16.213839340408786 -7.277038513710505 0.9615247533970954 1.2267618954007966 0.9943172119674198 0.12130468121367244 0.13550719690486474 0.6609378899384547 1.20546911244511 0.032955866406936395 0.07603154745215975 5.2839839074911746e-08 7.277038513710505 -0.23244468343337676 MVEPENAVTITPLRPEDDYS(ph)PR ddPTM_A549_MK2206_60min_R1 5 MVEPENAVTITPLRPEDDYSPR 22 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YDF9;A0A669KAX5;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 MVEPENAVT(0.005)IT(0.005)PLRPEDDY(0.003)S(0.987)PR;MVEPENAVTITPLRPEDDYS(0.999)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTIT(0.002)PLRPEDDYS(0.998)PR 157.68 3.5069e-33 184243000.0 13468.7 12711.199999999999 11518.0 11482.2 17130.5 11718.800000000001 12362.6 11734.400000000001 17285.7 16893.6 16567.2 True False 15741.887281900297 13358.145786075067 13151.425594867993 14295.339515455547 14610.62614263613 12958.875637690138 14608.724395913636 13397.787135092833 13370.516549590762 13077.324026885239 12453.107008540943 1.2640931512998121 1.0726757408342678 1.0560758520623095 1.1479335643427069 1.173251473115541 1.0406138507283615 1.1730987604855774 1.075858990523729 1.0736691285492541 1.0501254038784198 1.0 13.604218114339785 -14.99999999997471 0.07927956214917212 0.5759564957871576 1.2428820837911931 0.32213380636303235 0.060721185772918865 110.74876225876926 0.6497752124111075 8.129232150295088 0.8526440923789007 1.0000000000582324e-15 14.99999999997471 0.6669255880040356 MVEPENAVTITPLRPEDDYS(ph)PR ddPTM_A549_PD325901_60min_R1 5 MVEPENAVTITPLRPEDDYSPR 22 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YDF9;A0A669KAX5;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVT(0.006)IT(0.006)PLRPEDDY(0.001)S(0.986)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTITPLRPEDDYS(1)PR 225.84 6.703999999999999e-88 293599900.0 31633.8 31552.0 30251.7 30306.7 36306.0 33282.5 32192.300000000003 33676.0 36028.6 40693.7 39608.4 True False 34845.24008842729 34210.99777175364 32304.76228025019 32178.676027490357 33755.99180890052 33011.45835477771 33417.39559280249 33004.305761689066 34514.443234831444 38124.2928371697 34736.81789833464 1.0031212470413948 0.9848627433831177 0.92998622887098 0.9263564705802565 0.9717640777487239 0.950330523981598 0.962016604128975 0.9501246158552528 0.9935983006804473 1.0975182858933508 1.0 15.084177980098666 -8.807028986324019 7.065168825684862 0.9970837325488096 0.9587098497756785 0.33476722492318334 0.03687711346247827 0.15383772572390556 18.69354978170644 0.0037774608303638682 0.004028991844406282 1.5594484163430221e-09 8.807028986324019 -0.03837388277313103 MVEPENAVTITPLRPEDDYS(ph)PRER ddPTM_A549_MK2206_60min_R1 7 MVEPENAVTITPLRPEDDYSPRER 24 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YDF9;A0A669KAX5;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 MVEPENAVTITPLRPEDDYS(1)PRER;MVEPENAVTITPLRPEDDYS(1)PRER;MVEPENAVTIT(0.012)PLRPEDDYS(0.988)PRER;MVEPENAVTITPLRPEDDYS(1)PRER;MVEPENAVTITPLRPEDDYS(1)PRER;MVEPENAVT(0.001)IT(0.001)PLRPEDDY(0.093)S(0.906)PRER;MVEPENAVTITPLRPEDDYS(1)PRER 204.35 2.2461999999999997e-62 118107000.0 9866.16 11531.750000000002 9766.5 10554.74 13405.2 11304.289999999999 9991.919999999998 10440.509999999998 14973.8 15028.9 16122.6 True False 11531.32660354699 12118.666818913332 11151.536557759871 13140.651773820282 11433.312837761057 12500.502464619602 11807.322526492586 11920.484265220899 11582.258208245083 11633.861051975637 12118.913458876714 0.9515148897363125 0.9999796483435401 0.920176267913831 1.084309399387218 0.9434272203162342 1.031487064169386 0.9742888722292263 0.9836264864561376 0.9557175441137795 0.9599755862151329 1.0 13.56497273696108 -7.341620222362967 0.001582639207054497 1.3472954537620379 0.6156027011308037 0.0 0.04377204722208456 1314681.636264438 726.2110964482705 167084.46605215705 168659.18930052427 4.553861077222202e-08 7.341620222362967 -0.7316927526312341 MVEPENAVTITPLRPEDDYS(ph)PRER ddPTM_A549_PD325901_60min_R1 7 MVEPENAVTITPLRPEDDYSPRER 24 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YDF9;A0A669KAX5;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 MVEPENAVTITPLRPEDDYS(1)PRER;MVEPENAVTITPLRPEDDYS(0.999)PRER;MVEPENAVTITPLRPEDDYS(1)PRER;MVEPENAVT(0.018)IT(0.018)PLRPEDDYS(0.963)PRER;MVEPENAVTITPLRPEDDYS(1)PRER;MVEPENAVTITPLRPEDDY(0.002)S(0.998)PRER;MVEPENAVTITPLRPEDDYS(1)PRER 185.48 5.633699999999999e-51 244700000.0 15482.67 16064.07 15461.460000000001 16185.03 17802.840000000004 19456.409999999996 18096.519999999997 18447.6 18636.68 20907.2 20610.11 True False 17054.459260660766 17417.84555575857 16510.76765291197 17184.742544229903 16552.42993486383 19297.96344771216 18785.192971395707 18079.64814613777 17853.445150400476 19587.11582395494 18075.19712825173 0.9435282580683151 0.9636323981515138 0.9134488291198474 0.9507361066270178 0.915753771171447 1.0676488511181565 1.0392801161783318 1.0002462500328189 0.9877316979572713 1.0836460418647422 1.0 14.141723760855877 -7.234332050586797 24.99984369860761 1.0029213090267062 0.9382841877955143 0.5709558817577074 0.035959593374038076 432.13963819027424 398542.79993900016 0.0041379026941078464 0.007165522846534501 5.829991873800457e-08 7.234332050586797 -0.06463712123119192 MVIPNQPPLT(ph)ATKK ddPTM_A549_PD325901_60min_R1 1 MVIPNQPPLTATKK 14 1 C9JXK9;C9JUT4;A0A087WZF1;Q93052 C9JXK9 LPP Lipoma-preferred partner 1 MVIPNQPPLT(0.839)AT(0.161)KK 68.257 0.0020800000000000003 2095700.0 2730.1 2444.8 2751.4 2858.4 3108.3 3067.6 2883.4 3112.4 3106.6 2825.3 2676.0 True False 3007.257742206603 2650.8318760263455 2938.126549512269 3034.956876102594 2889.9837310528674 3042.6184826595377 2993.129364857023 3050.3207403694346 2976.0404054925084 2646.910075831287 2346.868964561647 1.2813914145259084 1.1295184844380408 1.2519346388225208 1.2931940052603106 1.2314210016376712 1.2964586129877278 1.2753713181494504 1.2997405421564217 1.268089718868637 1.127847406821745 1.0 11.196521577117736 -10.60656163765409 0.8093491035308956 0.9936038438039825 1.2579377524505664 0.5986384428407714 0.05819822900339379 0.22627491658118215 0.2551858770028036 0.03686449041972281 0.009186354948733471 2.4742202803658932e-11 10.60656163765409 0.2643339086465839 MVIPNQPPLTAT(ph)KK ddPTM_A549_MK2206_60min_R1 2 MVIPNQPPLTATKK 14 1 C9JXK9;C9JUT4;A0A087WZF1;Q93052 C9JXK9 LPP Lipoma-preferred partner 1 MVIPNQPPLT(0.45)AT(0.55)KK;MVIPNQPPLT(0.45)AT(0.55)KK 53.328 0.012425 3001260.0 3288.3999999999996 3928.1000000000004 4360.6 3867.3 5117.7 3733.4 3484.2 3417.7 5711.1 4816.7 5262.0 True False 3843.401526338914 4128.023511728356 4978.998649850786 4814.788673609693 4364.8931093761985 4128.465909969647 4117.234039784694 3902.16944126728 4417.544968752656 3728.604124656565 3955.300176188038 0.971709188970591 1.043668831149696 1.2588168857134245 1.2173004472823592 1.1035554610125469 1.0437806806229557 1.0409409795422204 0.9865672053816246 1.1168671837721584 0.9426855001053412 1.0 11.949571472726635 -7.14166060041739 4.498259022603826 1.0489417397240384 1.1302328080060227 0.21164323018406905 0.08484819125801943 0.33502192926610574 10.914533160752429 0.012797769175952399 0.022608542299379985 7.216712423567035e-08 7.14166060041739 0.08129106828198429 MVIQEIENS(ph)EDEEGKSGR ddPTM_A549_PD325901_60min_R1 3 MVIQEIENSEDEEGKSGR 18 1 Q07617;Q07617-2 Q07617 SPAG1 Sperm-associated antigen 1 1 MVIQEIENS(1)EDEEGKSGR;MVIQEIENS(1)EDEEGKSGR;MVIQEIENS(1)EDEEGKSGR 165.13 8.3244e-24 47229200.0 14125.400000000001 13836.1 13760.9 15745.899999999998 16904.2 15889.7 15630.8 15929.500000000002 15683.099999999999 17426.8 16688.2 True False 15559.400209430121 15002.116704797176 14694.79742501396 16718.4884814665 15716.90730832413 15760.29955141324 16225.638647501948 15611.773626048996 15023.993846449344 16326.468873923706 14635.65719521587 1.0631159231111402 1.02503881477226 1.0040408318539615 1.1423121120199144 1.0738777971283517 1.076842627645378 1.1086375166539029 1.06669440379843 1.0265335984611894 1.1155268708576018 1.0 13.837199909101455 -8.905832362013092 2.378828404888951 1.0103186670466349 1.070646535451828 0.0 0.047151641810576066 0.23057086580818684 2.551903962271596 0.006851031004037693 0.007085038928627833 1.2421316788020102e-09 8.905832362013092 0.06032786840519311 MVIQGPS(ph)SPQGEAMVTDVLEDQK ddPTM_A549_MK2206_60min_R1 2 MVIQGPSSPQGEAMVTDVLEDQK 23 0 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.513)S(0.402)PQGEAMVT(0.085)DVLEDQK;MVIQGPS(0.562)S(0.431)PQGEAMVT(0.007)DVLEDQK 70.99 6.8491e-05 5226800.0 1164.49 1279.42 1486.19 1161.3400000000001 1818.87 1386.53 1429.85 1452.5 1906.33 1680.44 2182.5 True False 1361.0274429529254 1344.5370131553398 1696.9540896715457 1445.8683521345347 1551.3166324425201 1533.2516842958753 1689.6352367218133 1658.3963230946908 1474.549298783466 1300.827436883734 1640.5250160643084 0.8296291916462756 0.8195772694652004 1.0343969601528011 0.8813448975031398 0.9456220522404449 0.934610365146527 1.0299356731391531 1.0108936510296298 0.8988276828115517 0.7929336182903667 1.0 10.679941878077548 -5.740680490167819 24.85507564363808 0.9581952609633058 0.8246030712901651 0.30955898184240593 0.06940323964154872 141.3566873884276 169246.58804221102 0.007194221823078228 0.02780036364884069 1.8168518265087287e-06 5.740680490167819 -0.13359218967314068 MVIQGPS(ph)SPQGEAMVTDVLEDQK ddPTM_A549_PD325901_60min_R1 5 MVIQGPSSPQGEAMVTDVLEDQK 23 0 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.54)S(0.414)PQGEAMVT(0.045)DVLEDQK;MVIQGPS(0.565)S(0.42)PQGEAMVT(0.015)DVLEDQK;MVIQGPS(0.499)S(0.499)PQGEAMVT(0.002)DVLEDQK;MVIQGPS(0.58)S(0.419)PQGEAMVTDVLEDQK;MVIQGPS(0.544)S(0.438)PQGEAMVT(0.019)DVLEDQK 106.73 6.4981e-11 15668100.0 3981.8 3836.7499999999995 4329.69 4576.84 5347.15 4365.76 4033.3700000000003 5156.06 4725.67 4413.79 4465.139999999999 True False 4386.029404753766 4160.0863875752975 4623.52879994104 4859.54101204219 4971.584630666069 4330.206698023115 4186.86210249475 5053.218338449182 4527.066523860098 4135.102546137884 3915.9560868545545 1.1200404977668665 1.0623424510658488 1.1806896444681112 1.2409590159489146 1.2695710882344025 1.1057853055500686 1.0691800443190866 1.2904175190861549 1.1560565091771522 1.0559624404418069 1.0 11.935148871454466 -10.421101173107225 0.7972700589173792 1.0006337013298061 1.1670029463364187 0.328097421557658 0.07446772584908946 0.5068142468309647 0.5890922532054887 0.04858704322647088 0.01479835236626415 3.7922663016489014e-11 10.421101173107225 0.16636924500661254 MVIQGPS(ph)SPQGEAMVTDVLEDQKEGR ddPTM_A549_MK2206_60min_R1 12 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.559)S(0.437)PQGEAMVT(0.004)DVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVT(0.001)DVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.495)S(0.495)PQGEAMVT(0.011)DVLEDQKEGR;MVIQGPS(0.544)S(0.447)PQGEAMVT(0.009)DVLEDQKEGR;MVIQGPS(0.503)S(0.452)PQGEAMVT(0.045)DVLEDQKEGR;MVIQGPS(0.496)S(0.496)PQGEAMVT(0.007)DVLEDQKEGR;MVIQGPS(0.499)S(0.499)PQGEAMVT(0.002)DVLEDQKEGR;MVIQGPS(0.529)S(0.464)PQGEAMVT(0.007)DVLEDQKEGR;MVIQGPS(0.495)S(0.495)PQGEAMVT(0.01)DVLEDQKEGR;MVIQGPS(0.556)S(0.439)PQGEAMVT(0.005)DVLEDQKEGR;MVIQGPS(0.557)S(0.442)PQGEAMVT(0.001)DVLEDQKEGR 94.449 2.0185e-09 117729500.0 9202.09 9943.650000000001 10937.74 9124.48 15548.289999999997 10901.419999999998 10373.789999999999 10506.04 16239.609999999999 15504.560000000001 15506.549999999997 True False 10755.177822499716 10449.73931223687 12488.876001563758 11359.978009613473 13261.157137695209 12055.001028623055 12258.573362487237 11995.30334339811 12561.364264328295 12002.06912761542 11655.845675991744 0.9227282276611478 0.8965234786662314 1.0714688876919378 0.9746163706518791 1.1377258678887643 1.0342450787121757 1.0517103351614348 1.0291233838232405 1.0776879356082847 1.0297038465717518 1.0 13.508766060832933 -5.757133964253123 24.999999999859753 1.0420412292643004 0.9096258021249403 0.6192699652932611 0.04092399887940656 52.44519496261214 304517.9288510959 0.005751709381909622 0.020802006107556205 1.7493070069947804e-06 5.757133964253123 -0.13241542713936016 MVIQGPS(ph)SPQGEAMVTDVLEDQKEGR ddPTM_A549_PD325901_60min_R1 8 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.61)S(0.39)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.563)S(0.436)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.499)S(0.499)PQGEAMVT(0.001)DVLEDQKEGR;MVIQGPS(0.576)S(0.424)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.559)S(0.441)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.558)S(0.441)PQGEAMVT(0.001)DVLEDQKEGR;MVIQGPS(0.379)S(0.379)PQGEAMVT(0.242)DVLEDQKEGR;MVIQGPS(0.474)S(0.474)PQGEAMVT(0.052)DVLEDQKEGR 97.771 9.209299999999999e-10 266698800.0 13506.669999999998 15093.740000000002 14814.330000000002 13942.710000000001 18429.6 17183.8 14982.749999999998 17530.8 15375.180000000002 16717.7 17022.35 True False 14877.857195315062 16365.742441285138 15819.719519603153 14803.919530508108 17135.16847466846 17043.86083007073 15552.926750125394 17181.134441353443 14729.01465322871 15662.141568939473 14928.708863567244 0.9965936995143443 1.0962597362471782 1.0596843748631455 0.9916409828740329 1.1477997616047002 1.1416835163599048 1.0418132533940374 1.1508787932279347 0.9866234774779568 1.0491290112276308 1.0 13.865801776322874 -8.796738279048931 24.990151520718634 0.9936832764936773 1.078598156862826 0.2047159860207507 0.05515776617856483 135.6113638860502 96006.6096416056 0.008790392778622064 0.009358267137379656 1.5968411693292058e-09 8.796738279048931 0.08491488036914874 MVIQGPSS(ph)PQGEAMVTDVLEDQK ddPTM_A549_MK2206_60min_R1 2 MVIQGPSSPQGEAMVTDVLEDQK 23 0 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.382)S(0.617)PQGEAMVTDVLEDQK;MVIQGPS(0.174)S(0.813)PQGEAMVT(0.013)DVLEDQK 91.27600000000001 2.2553e-07 4797500.0 1692.28 1879.49 1596.82 1308.0 2394.7200000000003 1904.37 2107.37 1766.8200000000002 2596.06 2547.52 2312.78 True False 1977.8954917263143 1975.1480130491402 1823.273087202389 1628.4600587183518 2042.459860266403 2105.889169381503 2490.251850760884 2017.2721456593192 2008.0565550559484 1972.0334626705192 1738.4528965192262 1.137733150945019 1.136152735000086 1.048790617711295 0.9367294690462394 1.1748721316268431 1.211358198774305 1.4324528756269026 1.1603835512013883 1.1550825214053997 1.134361170566642 1.0 10.76358826235245 -4.2765756089220925 16.36201817748413 1.111877105272454 1.0992908111902773 0.0 0.1242394058732675 0.0 0.0 0.018014109734921024 0.0 5.2896189905429255e-05 4.2765756089220925 -0.012586294082176819 MVIQGPSS(ph)PQGEAMVTDVLEDQK ddPTM_A549_PD325901_60min_R1 1 MVIQGPSSPQGEAMVTDVLEDQK 23 0 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.183)S(0.815)PQGEAMVT(0.002)DVLEDQK 80.711 1.4238e-05 3227400.0 762.97 615.16 682.1 846.88 624.32 808.74 529.84 741.73 730.0 599.81 739.34 True False 840.4261527311724 667.001692104208 728.3914078005087 899.1898541959715 580.4699169870754 802.153889576892 550.0033511395732 726.9356132740713 699.320638643382 561.937894235785 648.4058670624097 1.296142116262314 1.0286792979311652 1.123357213130214 1.386770077003982 0.8952261946932762 1.2371169514721307 0.8482393190415638 1.1211120228868983 1.078522996424509 0.866645295456122 1.0 9.340753334830593 -6.774587622496035 24.999409211453724 1.037018587215434 1.18977738255154 0.3083026913792366 0.13995380645413452 231.48138389385414 440127.1453031692 0.017118603637428644 0.032489506405938874 1.6803988571668804e-07 6.774587622496035 0.15275879533610603 MVIQGPSS(ph)PQGEAMVTDVLEDQKEGR ddPTM_A549_MK2206_60min_R1 4 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.212)S(0.788)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.201)S(0.791)PQGEAMVT(0.008)DVLEDQKEGR;MVIQGPS(0.034)S(0.966)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.046)S(0.954)PQGEAMVTDVLEDQKEGR 155.15 4.4800999999999995e-41 99146000.0 7991.2300000000005 9567.5 9494.599999999999 8074.25 12684.300000000001 8768.3 8130.8 7623.389999999999 13158.899999999998 12669.4 14197.7 True False 9339.954257184438 10054.444883903423 10841.07704923022 10052.44161246686 10818.456272790607 9696.15568607352 9608.061113220074 8704.02887815273 10178.430160445336 9807.373740719557 10672.019253414079 0.8751815411311686 0.9421314415907667 1.0158412191546655 0.9419437290886624 1.0137215850064814 0.9085586762759662 0.9003039523327664 0.8155934384552606 0.9537492314014671 0.918980139356672 1.0 13.38154555395632 -9.675141447359191 1.5285983601834938 0.9890818480730833 0.9316507613568165 0.0 0.05860482877226735 0.47636586587939395 2.244060922512759 0.014280039720602648 0.010600323179964094 2.1128007999940431e-10 9.675141447359191 -0.057431086716266844 MVIQGPSS(ph)PQGEAMVTDVLEDQKEGR ddPTM_A549_PD325901_60min_R1 5 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.045)S(0.955)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.362)S(0.638)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.171)S(0.829)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.006)S(0.994)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.037)S(0.963)PQGEAMVTDVLEDQKEGR 279.95 1.1206999999999999e-153 149414000.0 10125.16 11276.7 11876.8 11645.8 13628.8 12453.84 12627.23 13282.86 11442.09 12618.85 13250.900000000001 True False 11153.058789451165 12227.027084582098 12682.831069000264 12365.13461646921 12671.56010480756 12352.420056097497 13107.766147535387 13017.922937097906 10961.2187482398 11822.093657453584 11621.123304375904 0.9597229542561956 1.0521381422721883 1.091360166897513 1.0640223231959987 1.0903902981595692 1.0629282327162146 1.1279259159568242 1.120194889610718 0.9432150800871704 1.01729353934331 1.0 13.504461906753736 -8.767428271079687 24.999977969837623 0.9731848958811433 1.0731604628106541 0.39405846387584864 0.04562757098859649 87.01828318533516 363247.22162905044 0.00798727987951499 0.00860983459574506 1.708329847837034e-09 8.767428271079687 0.09997556692951082 MVIQLRPGRS(ph)PEPDGPAPAFLR ddPTM_A549_MK2206_60min_R1 1 MVIQLRPGRSPEPDGPAPAFLR 22 2 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 MVIQLRPGRS(1)PEPDGPAPAFLR 132.35 1.6352e-22 8316800.0 1284.9 1371.3 1149.9 1322.3 1898.5 1419.8 1099.6 893.99 2147.8 2111.5 1748.0 True False 1501.7597072110664 1441.093312704129 1312.9731109167135 1646.2635593603022 1619.2331649277426 1570.042293613036 1299.3830865470547 1020.7158202295508 1661.3267293318204 1634.5106834995618 1313.9233576542551 1.1429583761203204 1.096786433020652 0.9992767867836385 1.2529372811359205 1.232365004773609 1.194926845973748 0.9889336991975246 0.7768457834951902 1.2644015494920373 1.2439924094337211 1.0 10.359665409061344 -7.717663966165639 24.997620787314002 1.0871226701352723 1.1517780429487037 0.08982618100458217 0.1396381488156394 428.0797965441145 244450.99020459218 0.023838852514811493 0.03535858312486383 1.915737647003525e-08 7.717663966165639 0.06465537281343137 MVIQLRPGRS(ph)PEPDGPAPAFLR ddPTM_A549_PD325901_60min_R1 4 MVIQLRPGRSPEPDGPAPAFLR 22 2 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 MVIQLRPGRS(1)PEPDGPAPAFLR;MVIQLRPGRS(1)PEPDGPAPAFLR;MVIQLRPGRS(1)PEPDGPAPAFLR;MVIQLRPGRS(1)PEPDGPAPAFLR 168.79 1.008e-40 47389000.0 9449.53 8612.949999999999 8402.84 10429.02 11182.37 10079.74 9414.109999999999 9966.26 9674.800000000001 10703.64 10644.38 True False 10408.839329223681 9338.793523650651 8973.107252781736 11073.196879377085 10396.958908282235 9997.65393936714 9772.369107648652 9767.475125920282 9268.201801023277 10027.810343705367 9335.188740284268 1.1150111281956492 1.000386150025101 0.9612132654651067 1.1861781467355628 1.1137384789464508 1.0709643069372692 1.0468314438547786 1.0463071928873342 0.9928242544286308 1.0741947080761443 1.0 13.188463476039056 -8.501523475607044 1.764713517485887 0.996183113724146 1.0712869067492266 0.066783732745327 0.060884108593633204 0.3653454701368401 2.2232638288098414 0.010476252967803398 0.012397627833266287 3.1512040385809616e-09 8.501523475607044 0.07510379302508052 MVNHFIAEFK ddPTM_A549_MK2206_60min_R1 2 MVNHFIAEFK 10 0 P11142;E9PKE3;P11142-2;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 72.006 0.0025235 5282800.0 845.6400000000001 1025.18 780.84 957.51 1215.78 1046.21 915.4100000000001 1243.04 1344.15 1523.65 1298.8700000000001 False True 988.3633580869837 1077.35728310218 891.5748534030843 1192.0999929842567 1036.940372534027 1156.9192477820084 1081.7281477410331 1419.2447266503439 1039.7021711664795 1179.456406779118 976.3247320116602 1.012330555275926 1.103482527665102 0.9131949895052297 1.2210076769519134 1.0620855321338338 1.1849738205425193 1.1079593830550571 1.453660529244274 1.0649143026667303 1.2080574916389926 1.0 9.931217267217496 -4.236457752978701 16.238209295987087 1.079278043385405 1.0799807578446794 0.0 0.14405371765059183 0.0 0.0 0.01837690076836454 0.0 5.8015260549254405e-05 4.236457752978701 0.0007027144592743895 MVNHFIAEFK ddPTM_A549_PD325901_60min_R1 4 MVNHFIAEFK 10 0 P11142;E9PKE3;P11142-2;E9PN89;A8K7Q2 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;;; 92.538 0.00066423 37668000.0 7132.3 7082.26 7081.410000000001 7463.2 9149.900000000001 7572.699999999999 7537.5 7937.0 8347.1 7790.9 8738.8 False True 7856.3658454782535 7679.106905393628 7561.997066577623 7924.184913843015 8507.242589441381 7511.030441920681 7824.343687178263 7778.690308543951 7996.300414822159 7298.98124439669 7663.98299981738 1.0251022015139462 1.0019733741028143 0.9866928288799457 1.0339512645098294 1.1100288961554448 0.9800426804312662 1.0209239356826214 1.0149670620001772 1.0433609279943206 0.9523744043496198 1.0 12.903878645565726 -6.277073052049647 24.40006899675863 1.0247535853584904 1.00432785584169 0.015448293612927322 0.03862619688225066 1265.588035709097 1975249.103889434 0.004642318945356192 0.010811762981638854 5.28356370235588e-07 6.277073052049647 -0.02042572951680044 MVQEAEK ddPTM_A549_MK2206_60min_R1 2 MVQEAEK 7 0 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 P11142;A0A0G2JIW1 HSPA8;HSPA1B;HSPA1A Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 47.082 0.03662 11836000.0 4413.2 4412.299999999999 3877.8 4304.1 4422.8 3748.3 3398.7 3417.8 5000.799999999999 6066.2 5727.299999999999 False True 5158.040267619176 4636.867223542936 4427.7303500415965 5358.604693218389 3772.2119788477316 4144.942618079831 4016.199796514619 3902.2836165735207 3868.1267846366354 4695.84120684113 4305.0533445613355 1.198136202919631 1.077075439587941 1.028496047705249 1.2447243423796426 0.8762288587232598 0.9628086544656234 0.9329036077075256 0.9064425697542999 0.8985084446220211 1.0907742206663908 1.0 12.07181539904548 -6.771904483334101 24.99987414061728 0.9425088034832872 1.1250619812969662 0.5690485534455663 0.07669818977889857 97.03779824192307 231811.88684785404 0.009380017587471548 0.0178602781914679 1.690812760081511e-07 6.771904483334101 0.18255317781367897 MVQEAEK ddPTM_A549_PD325901_60min_R1 5 MVQEAEK 7 0 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 P11142;A0A0G2JIW1 HSPA8;HSPA1B;HSPA1A Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ;;;; 119.27 0.015271000000000002 54454700.0 26468.399999999998 28501.4 27202.5 27711.9 32441.899999999998 29489.5 26580.399999999998 28838.9 30520.6 30715.2 35300.399999999994 False True 29155.45248299377 30903.313003672014 29048.62523192101 29423.60112470876 30163.292862479175 29249.347289212572 27591.93166735298 28263.685515820598 29237.92532024548 28775.83703011116 30958.67458767263 0.9417538984244215 0.9982117585866334 0.9383032580951582 0.9504154010658092 0.9743082759263161 0.9447868062432915 0.8912504180117502 0.912948822656473 0.9444178638024661 0.9294918924458526 1.0 14.918056087248718 -10.475857630097122 0.9679431005179873 0.9977131686047749 0.9447817643202338 0.0 0.033299169788457074 0.4614173975038526 0.8193244349026233 0.015180303142363743 0.005199957414215716 3.343046134075945e-11 10.475857630097122 -0.05293140428454113 MVS(ph)PLRR ddPTM_A549_PD325901_60min_R1 1 MVSPLRR 7 1 H0YDQ8;Q53ET0 H0YDQ8 CRTC2 CREB-regulated transcription coactivator 2 1 MVS(1)PLRR 59.245 0.012874000000000002 3069300.0 480.62 381.94 598.09 536.44 501.39 475.38 439.96 603.8 637.48 560.03 562.03 True False 529.4121885862563 414.1274242185467 638.679984007339 569.5746804563655 466.1740961015982 471.50866289173666 456.7029185553495 591.7567353280637 610.6889324964154 524.6696102246825 492.90387300171227 1.0740678204904615 0.8401788805118764 1.2957495751004586 1.1555492087894121 0.9457708117866195 0.9565935443361767 0.9265557516805372 1.2005520097140887 1.2389615215993524 1.0644461100082692 1.0 8.945162506832583 -8.271302262727955 24.723987399154982 1.1225740816575234 1.0298937980130383 0.11651449109641565 0.1298845287729699 1225.9328831097719 3073127.07424538 0.02395749798794268 0.029150685829018114 5.3542388046634536e-09 8.271302262727955 -0.0926802836444851 MVSQS(ph)QPGSR ddPTM_A549_MK2206_60min_R1 2 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 MVS(0.076)QS(0.924)QPGSR;MVS(0.073)QS(0.927)QPGSR 57.885 0.0043643 24206000.0 1544.69 1864.6399999999999 2054.52 1442.54 2430.6000000000004 1916.56 1466.1599999999999 1320.48 2024.31 2797.8 2968.2 True False 1805.3959079553763 1959.5422114786174 2345.8818295857077 1795.9623647580818 2073.06195979635 2119.369107090435 1732.542293717561 1507.6620838003982 1565.807017158812 2165.7750368435104 2231.114021847458 0.8091903373277315 0.8782797258635991 1.051439687355475 0.80496216113193 0.9291600247663568 0.9499151931892332 0.7765368675702831 0.6757440762942225 0.7018050184016399 0.9707146365608674 1.0 11.123548529553162 -7.755184572944516 24.84462256178995 0.8332972100040396 0.9060310393651368 0.10871512489215962 0.11118204922431194 343.81860772711735 1365670.9978566335 0.02104846133470846 0.03078623867461135 1.7571766641057016e-08 7.755184572944516 0.07273382936109729 MVSQS(ph)QPGSR ddPTM_A549_PD325901_60min_R1 2 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 MVS(0.012)QS(0.988)QPGSR;MVS(0.032)QS(0.966)QPGS(0.002)R 78.043 0.00048237 57658000.0 5162.6 5073.299999999999 4741.0 4582.1 6557.7 5882.7 4605.5 5263.7 5239.1 5439.299999999999 5470.6 True False 5686.703351494751 5500.844795747897 5062.7527699489965 4865.125910295867 6097.1097748368575 5834.79324160297 4780.764822726301 5158.711374207234 5018.91884646102 5095.861669723252 4797.750880990638 1.1852852498086692 1.1465465657133254 1.0552346079510575 1.0140430445382602 1.2708266698453357 1.216151773265519 0.996459578939032 1.0752353555176808 1.0460982595713089 1.0621355289441499 1.0 12.228142533562698 -7.775057055425014 24.999642353744665 1.025456558703424 1.1432233971456789 0.3850975233602799 0.06977184763477078 184.4906257802775 338691.62314944365 0.011311983526700837 0.015675265708078232 1.678583479780103e-08 7.775057055425014 0.117766838442255 MVSQSQPGS(ph)R ddPTM_A549_MK2206_60min_R1 2 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 MVSQSQPGS(1)R;MVSQSQPGS(1)R 71.888 0.0024053 18853300.0 4395.5 6179.4 5184.6 4346.2 6039.9 4778.9 5173.700000000001 5301.9 7394.700000000001 7708.400000000001 7363.1 True False 5137.352940342626 6493.90506564858 5919.854240245926 5411.019195108334 5151.4387110071475 5284.600026022916 6113.694320542471 6053.460561387771 5719.812256909401 5967.067086283692 5534.639058778054 0.9282182425599509 1.1733204273455031 1.0696007774629697 0.9776643314303114 0.9307632632044645 0.9548228836425076 1.1046238527236971 1.0937408017216326 1.0334571407755413 1.0781312065544362 1.0 12.43427351944846 -6.227836780914528 22.197939044581645 1.0155540143531574 1.0686739609233056 0.03195399909792995 0.07478325447076391 313.0258574610469 206782.42690029164 0.009805194717052016 0.025938364369609508 5.917840001022809e-07 6.227836780914528 0.05311994657014818 MVSQSQPGS(ph)R ddPTM_A549_PD325901_60min_R1 2 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 MVSQSQPGS(1)R;MVSQSQPGS(1)R 100.04 0.00046102 21658400.0 7935.2 6970.0 6024.0 6327.0 8601.6 7621.6 6778.2 6003.4 6171.3 6943.5 8437.8 True False 8740.775662414506 7557.386361217123 6432.824865254746 6717.804420340443 7997.453289909068 7559.532216533425 7036.148110173357 5883.657477423808 5911.941722273844 6505.08622501488 7400.004091621173 1.1811852472232351 1.0212678625102585 0.8693001768118563 0.9078109062056917 1.0807363335061357 1.021557842798071 0.9508302999643202 0.7950884086788164 0.7989106018154474 0.8790652200287856 1.0 12.853310353100964 -8.00203852554024 8.573710632391887 0.8931251680898221 1.0041717755312127 0.33353006598454726 0.09311571503072813 0.15059602936370206 126.62899124723741 0.017542441582115053 0.02366386922837471 9.953171205110378e-09 8.00203852554024 0.11104660744139061 MVT(ph)GNGSLK ddPTM_A549_MK2206_60min_R1 2 MVTGNGSLK 9 0 P52701;P52701-2;P52701-3;A0A087WWJ1;A0A494C0M1;P52701-4 P52701 MSH6 DNA mismatch repair protein Msh6 1 MVT(0.971)GNGS(0.029)LK;MVT(0.998)GNGS(0.002)LK 56.548 0.0072485 5043600.0 3702.7 3642.6 3860.6 3652.6 4973.4 3052.1000000000004 3224.7 3817.9 5565.1 5574.700000000001 5512.299999999999 True False 4327.625237676407 3827.992781197451 4408.091131407136 4547.487163971444 4241.81944822314 3375.0711961799866 3810.586248807101 4359.099016828379 4304.613735638565 4315.3713982027 4143.443778259467 1.0444512992750945 0.9238674363781215 1.0638713512987112 1.09751390566272 1.023742489394896 0.8145570150822102 0.9196664544602101 1.0520473427684596 1.0388975851982722 1.0414938947272152 1.0 12.01661463126622 -3.861736798807724 12.370190127207326 1.0060966825231692 0.9984154152789916 0.0 0.07912834463756205 0.0 0.0 0.010384433143497799 0.0 0.00013748749561137536 3.861736798807724 -0.007681267244177614 MVT(ph)GNGSLK ddPTM_A549_PD325901_60min_R1 2 MVTGNGSLK 9 0 P52701;P52701-2;P52701-3;A0A087WWJ1;A0A494C0M1;P52701-4 P52701 MSH6 DNA mismatch repair protein Msh6 1 MVT(0.993)GNGS(0.007)LK;MVT(0.962)GNGS(0.038)LK 56.548 0.0072485 12096500.0 5327.2 4828.2 4780.1 5268.5 5683.3 5712.6 5573.799999999999 5371.0 6278.1 6140.4 5641.9 True False 5868.013422322633 5235.089358569374 5104.506331076399 5593.923279368362 5284.1246143206145 5666.0784796064945 5785.914009100395 5263.871191532011 6014.253289680847 5752.694096072779 4947.982066950803 1.1859407214745223 1.0580251277659745 1.0316339594621964 1.1305463931916837 1.0679352800437614 1.145129146172961 1.1693482172755667 1.0638420108049977 1.2154961776947455 1.1626343867527154 1.0 12.272624556203526 -5.239745790575629 22.650412287801878 1.1013554179815042 1.1859410365973289 0.11962570243771198 0.06303691477133218 3035.5280689198007 3169232.0467720716 0.010880259826264192 0.6031972109535759 5.7577686327571796e-06 5.239745790575629 0.0845856186158247 MVVES(ph)AYEVIK ddPTM_A549_PD325901_60min_R1 1 MVVESAYEVIK 11 0 A0A5F9ZHM4;P07195;A0A3B3IS95 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 1 MVVES(0.72)AY(0.28)EVIK 124.23 4.8573e-13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 MVVESAY(ph)EVIK ddPTM_A549_PD325901_60min_R1 1 MVVESAYEVIK 11 0 A0A5F9ZHM4;P07195;A0A3B3IS95 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 1 MVVES(0.002)AY(0.998)EVIK 158.79 2.8676e-13 1712300.0 2032.6 2178.4 2346.2 2177.4 2298.0 2228.9 2524.9 2156.1 2181.3 2104.7 1957.4 True False 2238.948055678967 2361.9814130954637 2505.4272408467273 2311.8930527658076 2136.5964076696237 2210.748577389439 2620.9864511782953 2113.094894072272 2089.627546675082 1971.808882809651 1716.6522089809291 1.3042525701860677 1.3759230907334614 1.4594844708434247 1.3467451593693731 1.244629748816733 1.287825551281482 1.526801082634096 1.2309394314219806 1.2172690168357199 1.1486362074355136 1.0 10.745382065876 -9.62192362075043 0.5058233185465576 0.995729837650686 1.3693954893574898 0.5626505863517081 0.09144581983636808 0.3436313710132321 0.1925475670000782 0.053392417149903636 0.024948455151557216 2.388231263548295e-10 9.62192362075043 0.37366565170680377 MVVESAYEVIK ddPTM_A549_PD325901_60min_R1 2 MVVESAYEVIK 11 0 A0A5F9ZHM4;P07195;A0A3B3IS95 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ; 117.7 1.029e-05 5632800.0 5498.6 5643.0 6749.3 6690.3 7576.299999999999 7197.200000000001 7126.0 6526.7 7031.0 6810.6 7100.5 False True 6056.813824144626 6118.555414110224 7207.348084837959 7103.544636226273 7044.1668248160895 7138.588389424056 7397.183829496821 6396.519848402903 6735.511520961123 6380.57755369573 6227.1835137780145 0.972640971756102 0.9825558216764538 1.157400945209222 1.1407315394687272 1.1311962798639947 1.1463590841075268 1.1878859540802211 1.027193085646219 1.081630484481211 1.0246329724470657 1.0 12.604364080420762 -10.141612613711034 0.6958431652040474 1.002190182940469 1.0979712216895001 0.1689446404453775 0.06819250954233319 0.8808773278869512 0.8226748169125474 0.0428486235508513 0.01537070231835169 7.217509867254101e-11 10.141612613711034 0.09578103874903121 MVVPAALK ddPTM_A549_PD325901_60min_R1 2 MVVPAALK 8 0 P40429;Q8J015;M0QYS1;Q6NVV1 P40429 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 0 ; 129.96 0.0029614 2771600.0 4429.5 4314.4 4678.9 4876.1 5231.4 5245.1 4758.200000000001 5203.8 5077.200000000001 5412.5 4901.2 False True 4879.179579174448 4677.989629388114 4996.438290511359 5177.285622573421 4863.964511350248 5202.38564460736 4939.275904786947 5100.006126697876 4863.822940438604 5070.753826296972 4298.383471266646 1.1351196587717787 1.0883137022694733 1.162399381979526 1.2044727179838566 1.1315799401948048 1.2103121276600115 1.149100804477885 1.186493983328809 1.1315470043451787 1.1796885643622494 1.0 12.069578480181683 -10.223205005743258 0.6978437357424789 1.0003856187408433 1.1584496178513999 0.0 0.06173689641684611 0.27224339238596756 0.24949643959738996 0.022389696076831275 0.007430837946875046 5.981291856149458e-11 10.223205005743258 0.15806399911055657 MWFS(ph)PR ddPTM_A549_PD325901_60min_R1 1 MWFSPR 6 0 A0A494C142;Q99728-3;Q99728-2;Q99728;A0A087X2H0 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 MWFS(1)PR 62.717 0.060860000000000004 1124600.0 520.41 425.35 675.97 441.38 534.54 605.23 347.05 572.31 640.71 525.11 517.96 True False 573.2416400944068 461.1957372659546 721.8453891378241 468.6430401532897 496.99575446288986 600.3012075433667 360.257177663047 560.8948280814905 613.7831868290432 491.95446498416703 454.2542036189653 1.2619401989623629 1.0152811654612932 1.5890780611098494 1.0316757366683478 1.0940917013060307 1.321509416447597 0.7930739546116248 1.234759796635755 1.3511887879938984 1.082993753420112 1.0 8.827356054838793 -11.134251181723176 1.5155068719584783 1.0005113827744405 1.2048042505570717 0.06505305534564687 0.20000201057219757 0.6820833473801087 2.8174644863283973 0.13797556910012326 0.0299703286633528 7.340891721876478e-12 11.134251181723176 0.20429286778263123 MWWRDLT(ph)R ddPTM_A549_MK2206_60min_R1 1 MWWRDLTR 8 1 A0A140T901;A0A140T8Y9;Q9H2S5-3;Q9H2S5-2;Q9H2S5 A0A140T901 RNF39 RING finger protein 39 1 MWWRDLT(1)R 47.261 0.010751 4438300.0 1022.3 1438.7 1306.1 939.76 1251.6 1271.4 939.22 1232.0 1478.0 1885.5 1692.2 True False 1194.839247164661 1511.9236848154535 1491.324619678511 1170.001242187429 1067.4912979844948 1405.9387041129842 1109.8641165394006 1406.6397728417628 1143.2353598810082 1459.5642404633784 1271.9800376559097 0.9393537726948853 1.1886379031558767 1.1724434154067578 0.9198267327713616 0.8392358892296294 1.10531506980561 0.8725483762974243 1.1058662331163727 0.8987840422305992 1.1474741719635486 1.0 10.312860313931516 -6.267440506590926 24.729821572876578 0.9576688423032902 1.1089943193431908 0.1284288377170768 0.11556107466446507 350.3878560820533 1443903.2692296878 0.013213798277604064 0.03147437569718284 5.402061117950237e-07 6.267440506590926 0.15132547703990062 MWWRDLT(ph)R ddPTM_A549_PD325901_60min_R1 1 MWWRDLTR 8 1 A0A140T901;A0A140T8Y9;Q9H2S5-3;Q9H2S5-2;Q9H2S5 A0A140T901 RNF39 RING finger protein 39 1 MWWRDLT(1)R 53.327 0.007163500000000001 6974900.0 1541.7 1508.5 1659.2 2023.8 1913.3 2422.2 1831.0 1776.2 1898.9 2151.5 2391.5 True False 1698.2122490604447 1635.6265890812108 1771.8032895801264 2148.805529616719 1778.9164085266711 2402.474406277851 1900.6797069616448 1740.7722975980569 1819.0958366026277 2015.6539228227132 2097.3606609675567 0.8096901408826004 0.7798499416531737 0.8447775924064277 1.0245283844627036 0.848169054389539 1.1454750968627108 0.9062245432241592 0.8299823344617334 0.867326192607923 0.9610430672866962 1.0 11.03435925246258 -6.0449475155805565 6.599541800221147 0.939379064621297 0.7984903354208772 0.3397050353895601 0.0857801305426484 0.18993117466863357 21.943889963454087 0.012353216761446227 0.033818298173540255 9.016800989191766e-07 6.0449475155805565 -0.14088872920041984 MY(ph)DLLLLK ddPTM_A549_PD325901_60min_R1 2 MYDLLLLK 8 0 F5H6Q4;Q9HBA0-6;Q9HBA0-2;Q9HBA0-4;Q9HBA0-5;Q9HBA0-3;Q9HBA0 F5H6Q4 TRPV4 Transient receptor potential cation channel subfamily V member 4 1 MY(1)DLLLLK;MY(1)DLLLLK 40.431999999999995 0.040986 23356500.0 4700.7 2333.84 1780.78 2011.4899999999998 1578.99 1542.6 961.25 1368.1399999999999 2386.9 2427.56 4440.4 True False 5177.911603527557 2530.520887412194 1901.634439500058 2135.7351688747563 1468.0871896197816 1530.0375770474006 997.830894766183 1340.8513744149323 2286.5868936683423 2274.2834473100197 3894.258950014773 1.3296269380103536 0.6498080687219309 0.48831740875702273 0.5484317289343725 0.3769875625795795 0.39289569509536504 0.2562312644264187 0.34431489832227147 0.5871686816460082 0.584009300999717 1.0 11.927133104385682 -10.253249502678102 0.9089311006812248 0.9729336463048165 0.5337916573072465 0.02833333392890136 0.2951821292127291 0.5314036519533092 0.8578950473908585 0.13079768718428975 0.052813259055874785 5.5814944511357927e-11 10.253249502678102 -0.43914198899756995 MYFPDVEFDIKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 MYFPDVEFDIKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MYFPDVEFDIKS(1)PK;MYFPDVEFDIKS(1)PK 93.75399999999999 1.2825e-05 60927000.0 7856.400000000001 7601.5 7341.200000000001 7353.1 9583.1 7415.4 6873.0 7349.8 10239.2 9782.0 10108.2 True False 9182.368249461448 7988.383881368369 8382.292548797088 9154.609830093204 8173.438684655809 8200.092706055859 8121.735134446988 8391.656657818496 7920.0375486425 7572.239406105949 7598.054967872274 1.2085156383164253 1.0513722150137854 1.1032155708587126 1.2048622797285213 1.0757277644366219 1.0792357703029591 1.0689229241942906 1.10444800587807 1.0423769743877482 0.9966023460115142 1.0 12.891414433831367 -8.413699902726142 0.2947195471937031 0.9879960992534065 1.1519820230666558 0.5330061915381843 0.04546868856864998 0.8456795355831803 0.22764211057901998 0.03929411256675769 0.048175112706518176 3.857448150721051e-09 8.413699902726142 0.16398592381324928 MYFPDVEFDIKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 MYFPDVEFDIKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MYFPDVEFDIKS(1)PK;MYFPDVEFDIKS(1)PK 82.70700000000001 8.206600000000001e-05 73971000.0 10109.900000000001 11840.2 12222.5 11522.2 13669.9 13459.3 13219.8 14812.6 13716.5 15781.5 14636.1 True False 11136.249605484982 12838.015207185512 13051.992349863243 12233.900125185173 12709.773382594867 13349.691923216697 13722.886723152127 14517.1510727401 13140.04320541364 14785.053396712368 12835.952485882177 0.8675826447420525 1.0001606987331562 1.016830840112464 0.9530964015830394 0.9901698683112071 1.0400234760840354 1.0690976566207657 1.1309757564705085 1.0236905457437555 1.15184700262594 1.0 13.647902733949225 -7.06116757440559 4.047501560433739 1.027941234154068 0.9666417531655587 0.3166864346831123 0.06199704335133623 0.26913049580380477 8.798205168963424 0.007853667051294764 0.01425709780142036 8.686252018222018e-08 7.06116757440559 -0.061299480988509236 MYLQQDELEEEEDERGPT(ph)PPVR ddPTM_A549_MK2206_60min_R1 3 MYLQQDELEEEEDERGPTPPVR 22 1 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;A0A087WZ85;A0A087WTM1;Q9Y6N7-5;H7C545;Q9Y6N7-6 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 MYLQQDELEEEEDERGPT(1)PPVR;MYLQQDELEEEEDERGPT(1)PPVR;MYLQQDELEEEEDERGPT(1)PPVR 168.69 1.9588e-40 53683000.0 9104.2 10572.7 9652.3 9446.7 14917.5 11263.1 9718.7 10419.2 15790.400000000001 13142.099999999999 14626.099999999999 True False 10640.766383680433 11110.805270347078 11021.14128054734 11761.141924078474 12723.155511092751 12454.953766159308 11484.461989109555 11896.153507461753 12213.899612087338 10173.290482415145 10994.03571017556 0.9678671840070378 1.0106211734480217 1.0024654795642234 1.0697747609818038 1.157277986582925 1.1328827824919279 1.044608394211425 1.0820551998436057 1.1109568800820548 0.925346319641224 1.0 13.424433450121946 -6.2315518030277675 5.006499316513239 1.0692336750283862 0.9941273424489929 0.2145973724452208 0.060899155479485614 0.21152147093948048 14.44382033624922 0.007818649883728643 0.020722924397024355 5.867433781783402e-07 6.2315518030277675 -0.07510633257939325 MYPPRS(ph)PK ddPTM_A549_MK2206_60min_R1 12 MYPPRSPK 8 1 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 MY(0.004)PPRS(0.996)PK;MY(0.002)PPRS(0.998)PK;MY(0.004)PPRS(0.996)PK;MY(0.051)PPRS(0.949)PK;MY(0.002)PPRS(0.998)PK;MY(0.001)PPRS(0.999)PK;MY(0.004)PPRS(0.996)PK;MYPPRS(1)PK;MYPPRS(1)PK;MY(0.001)PPRS(0.999)PK;MYPPRS(1)PK;MYPPRS(1)PK 73.067 0.0014944000000000001 372257500.0 149867.6 163705.5 149720.8 133914.59999999998 191604.9 147346.0 141397.8 140909.1 206602.2 212654.7 211328.69999999998 True False 175161.58696896659 172037.4107072752 170953.4607747969 166723.68301165497 163420.07302747664 162938.0559196407 167087.9499772308 160883.3964410205 159807.13157591887 164615.85557489644 158849.9514145929 1.102685807638687 1.08301834010804 1.0761946053644942 1.0495671010720795 1.028770053576887 1.025735635854102 1.0518602523279155 1.012801042797428 1.0060256874667073 1.0362978024793643 1.0 17.277305123229567 -4.052793663527269 0.25004872906191394 0.9960929755639149 1.2894251947739312 0.772622393938595 0.015120743731799714 3.27127331266271 0.09564887417338575 0.005437407260739357 0.3300886925289742 8.855362346192796e-05 4.052793663527269 0.2933322192100164 MYPPRS(ph)PK ddPTM_A549_PD325901_60min_R1 6 MYPPRSPK 8 1 H3BUF6;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 MY(0.006)PPRS(0.994)PK;MY(0.009)PPRS(0.991)PK;MY(0.002)PPRS(0.998)PK;MYPPRS(1)PK;MYPPRS(1)PK;MYPPRS(1)PK 77.14 0.001261 391430400.0 97490.2 99993.0 102345.0 109995.3 116904.79999999999 114713.5 109444.90000000001 118573.8 127633.3 134952.8 144315.90000000002 True False 107387.3333355082 108419.7610354641 109290.74715048115 116789.45986354875 108693.81014766559 113779.3112891398 113609.88556004746 116208.75253965362 122269.3162577568 126431.85717681106 126565.95919386474 0.8484693200248253 0.8566265505039504 0.8635082280147489 0.9227556967719809 0.85879181764171 0.8989724568425286 0.8976338210025961 0.9181675173942571 0.9660521441667689 0.998940457466543 1.0 16.949529908382253 -8.503858641567234 0.5253150131882178 0.9983549730280541 0.8617722566485293 0.874640192537879 0.01880763331353288 0.17402623088977826 0.10875570892450598 0.0064022154355858054 0.007532162509183033 3.134305742916006e-09 8.503858641567234 -0.1365827163795248 MYS(ph)FDDVLEEGK ddPTM_A549_MK2206_60min_R1 1 MYSFDDVLEEGK 12 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10 E9PMS6 LMO7 LIM domain only protein 7 1 MY(0.175)S(0.825)FDDVLEEGK 76.07300000000001 0.00042149 7271400.0 1641.2 1674.3 1367.4 1362.9 2386.2 1830.3 1841.5 1879.3 2378.6 1980.1 2344.8 True False 1918.1944365124157 1759.5147184864902 1561.3178814397024 1696.8105611829064 2035.1931409800259 2023.9811311451897 2176.076713237907 2145.6965301148725 1839.8508978436844 1532.7940347608246 1762.5214468121828 1.088324025776704 0.9982940756090481 0.885843337829227 0.9627176816780723 1.1547054616901347 1.1483441150778055 1.2346384307400675 1.2174016571518755 1.0438743319528763 0.869659791960626 1.0 10.783425097362924 -4.8970738425315075 16.85998084745162 1.0497854322815683 3.1837558470209695 0.007669989864311333 0.1187264987048869 578.3743570244626 97205.40742821632 0.015623522773226145 1223.3792953910959 1.267436346966196e-05 4.8970738425315075 2.133970414739401 NAASFPLRS(ph)PQPVCSPAGSEGTPK ddPTM_A549_MK2206_60min_R1 2 NAASFPLRSPQPVCSPAGSEGTPK 24 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NAAS(0.001)FPLRS(0.999)PQPVCSPAGSEGTPK;NAAS(0.002)FPLRS(0.998)PQPVCSPAGSEGTPK 119.18 1.9083e-16 15509100.0 2826.7 3480.6000000000004 3380.0 3418.0 4719.6 3200.8999999999996 3944.0 2914.8 5611.700000000001 4995.9 5500.5 True False 3303.7778538201574 3657.747673155398 3859.3348246790956 4255.410153439853 4025.353092016313 3539.617113414543 4660.573748037092 3327.9818262006233 4340.658910043475 3867.322720196758 4134.574043922901 0.7990612379227146 0.8846733990727885 0.9334298488018714 1.0292257698697065 0.9735835056413795 0.8561020012731806 1.1272198051180915 0.8049152804730086 1.049844279950309 0.9353618242442759 1.0 12.013522990993568 -3.590674241952565 0.4354967532567247 1.0100582254022232 1.395012262934046e-13 0.19531824378391005 0.08881192268239804 14.339087609735511 0.5894583204307378 0.016812628434358767 10.380834558248212 0.0002566408340732591 3.590674241952565 -1.0100582254020838 NAASFPLRS(ph)PQPVCSPAGSEGTPK ddPTM_A549_PD325901_60min_R1 2 NAASFPLRSPQPVCSPAGSEGTPK 24 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NAASFPLRS(1)PQPVCSPAGSEGTPK;NAAS(0.003)FPLRS(0.997)PQPVCSPAGSEGTPK 133.95 2.7641e-23 23903000.0 4684.3 4426.8 5951.0 4778.3 5618.200000000001 5962.700000000001 5928.299999999999 5985.4 5130.4 4937.3 6824.1 True False 5159.8466876006005 4799.861971855949 6354.870646270085 5073.444738693332 5223.597013737805 5914.141748126885 6153.904700590233 5866.016501544534 4914.787129446587 4625.558035395111 5984.77896153406 0.8621616137813038 0.8020115701358527 1.061838822639017 0.847724664737304 0.8728136907497177 0.9881971892594228 1.028259312523185 0.9801559154059243 0.8212144777669106 0.7728870297675047 1.0 12.547082249126193 -5.667641865221833 23.898835395140864 0.9306598770983036 0.8320821441631195 0.15484964949554003 0.08852739056875934 16.574933315194873 4214.4399668841015 0.011784223100835904 0.045640099614797695 2.1496023825241686e-06 5.667641865221833 -0.09857773293518401 NADGLIAHAAPKPPQLRS(ph)PR ddPTM_A549_PD325901_60min_R1 3 NADGLIAHAAPKPPQLRSPR 20 2 Q9UEG4 Q9UEG4 ZNF629 Zinc finger protein 629 1 NADGLIAHAAPKPPQLRS(1)PR;NADGLIAHAAPKPPQLRS(1)PR;NADGLIAHAAPKPPQLRS(1)PR 93.876 6.4568e-07 16309800.0 2743.61 3532.11 3002.77 3982.8199999999997 4511.610000000001 3747.9 3115.54 3645.33 3764.52 3463.2000000000003 4729.15 True False 3022.139267461069 3829.7733056411253 3206.556029322876 4228.82974575949 4194.7300778095505 3717.3783450122855 3234.103579588903 3572.621033443936 3606.3103158709373 3244.532960966591 4147.494530551834 0.7286662454161129 0.9233944197948261 0.7731308638751203 1.0196106865502808 1.0113889353945529 0.8962949360460469 0.779772837737437 0.8613925846379815 0.869515387978368 0.7822874598305735 1.0 12.018024363311351 -10.627114270793545 0.877244355450321 1.0009563194533253 0.8782223515624707 0.0 0.10810192407859272 0.7820452692169194 1.0612395270254613 0.06146052887899956 0.016158023828269558 2.3598572300380743e-11 10.627114270793545 -0.12273396789085456 NADPILISLK ddPTM_A549_PD325901_60min_R1 2 NADPILISLK 10 0 H0YHL7;B4E3S0;Q9ULV4;Q9ULV4-2;Q9ULV4-3 H0YHL7 CORO1C Coronin;Coronin-1C 0 ; 114.83 0.00025704 3988300.0 4481.4 4412.5 4943.2 4856.1 5841.6 5228.1 5616.7 5673.3 5950.7 5240.4 5539.3 False True 4936.348428967686 4784.356860670094 5278.675277876371 5156.050267996718 5431.3061684259665 5185.524086971033 5830.446592076173 5560.141580882246 5700.612773116675 4909.520249667738 4858.001216515819 1.0161274583846356 0.9848406057216793 1.0865940625807957 1.0613521977861218 1.118012517156454 1.0674192648082776 1.2001739670740135 1.144532768328536 1.1734481979412064 1.0106049856424015 1.0 12.246147135908224 -5.806069138793007 6.2566441922899205 1.0960109562519629 1.0004606683599624 0.27741412239214003 0.05936981116755571 0.20224768780027358 19.171962767843088 0.009990428432793443 0.03258023758824447 1.5628988125413955e-06 5.806069138793007 -0.09555028789200049 NADRS(ph)IER ddPTM_A549_MK2206_60min_R1 1 NADRSIER 8 1 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 1 NADRS(1)IER 59.198 0.0036311 2828200.0 766.68 794.95 574.05 632.72 654.54 404.65 426.81 546.71 555.02 1052.7 1186.5 True False 896.0768404736399 835.4095594940187 655.4589219251578 787.7364284038799 558.2580330638947 447.469794415069 504.3558522818736 624.2078167291561 429.30885618481557 814.8943388680974 891.8593042658882 1.0047289255015657 0.9367055492925146 0.7349353410229683 0.8832519037879921 0.6259485441186387 0.5017268892915712 0.5655105574045914 0.6998949427824349 0.4813638811989414 0.9137027947909984 1.0 9.800672324754693 -5.652823918005074 1.2397405208927612 0.7096637242985496 1.0541854723830606 0.29051109524937646 0.15898769596422194 1.0699765515079034 2.1505997282986993 0.030809455821878218 0.3912940759639776 2.2242115005738708e-06 5.652823918005074 0.34452174808451097 NADRS(ph)IER ddPTM_A549_PD325901_60min_R1 1 NADRSIER 8 1 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 1 NADRS(1)IER 68.536 0.0020891 5369300.0 778.2 696.72 846.74 576.44 827.52 782.8 426.74 608.02 638.13 910.87 914.23 True False 857.2022911194391 755.4350395390528 904.2048682612556 612.0453896097746 769.3978499890197 776.4251363365131 442.979824221088 595.8925641175373 611.311615256851 853.3575127499532 801.7855057814631 1.0691167212906447 0.9421909402100819 1.1277391044628189 0.763353022967461 0.959605585834485 0.9683701323332947 0.5524916839065781 0.7432069547537511 0.762437847589966 1.064321450807751 1.0 9.647072527285596 -6.261371514520839 24.999999977587766 0.8555113884528418 1.0359331234668097 0.26503867135331116 0.14395626863466982 7.012869800935058 2582655.7680685613 0.02068557850287087 0.05113784156207238 5.47808145344881e-07 6.261371514520839 0.18042173501396785 NADS(ph)QEDAEELK ddPTM_A549_MK2206_60min_R1 1 NADSQEDAEELK 12 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 NADS(1)QEDAEELK 137.21 1.0112999999999999e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NADS(ph)QEDAEELK ddPTM_A549_PD325901_60min_R1 2 NADSQEDAEELK 12 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 NADS(1)QEDAEELK;NADS(1)QEDAEELK 163.8 3.0061e-14 17095000.0 4432.7 4573.2 3720.8 3585.5 5963.0 4373.6 5214.299999999999 4977.4 4198.799999999999 4058.8 4551.3 True False 4882.704440818729 4958.599613646797 3973.315862988024 3806.968191738683 5544.1794512332335 4337.98285166246 5412.7330398744425 4878.121852305238 4022.339037720317 3802.5266753208593 3991.5189530677962 1.2232697622708235 1.2422838703636174 0.995439558149716 0.9537642778353159 1.3889898849088755 1.0868000133954967 1.3560584588266409 1.2221216809094737 1.0077213925362507 0.9526515394342092 1.0 11.962722146158509 -8.770907030655895 23.916420656123883 1.0036461766991487 1.1809839515628815 0.31869295498192407 0.1274619792015251 106.8576552909651 269934.20519006584 0.02171611152387928 0.023279430639144144 1.6947005458702267e-09 8.770907030655895 0.1773377748637328 NADSELMPPPPERGDPPRLS(ph)PDPVAGSAVSQELR ddPTM_A549_MK2206_60min_R1 3 NADSELMPPPPERGDPPRLSPDPVAGSAVSQELR 34 2 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 NADS(0.001)ELMPPPPERGDPPRLS(0.986)PDPVAGS(0.006)AVS(0.006)QELR;NADSELMPPPPERGDPPRLS(0.999)PDPVAGSAVSQELR;NADS(0.004)ELMPPPPERGDPPRLS(0.947)PDPVAGS(0.022)AVS(0.027)QELR 64.395 0.00033506 76865000.0 3130.33 4517.16 5172.02 4588.47 5988.0 4880.1 3897.47 4417.35 7264.3 6916.299999999999 6590.9 True False 3658.653174779371 4747.064149649665 5905.490207081888 5712.645355984248 5107.173132255633 5396.508942851793 4605.589849331166 5043.522890067013 5618.947648703388 5353.903026421034 4954.197630413856 0.7384956046805383 0.9581903072472124 1.1920174865104372 1.153091939835883 1.0308779570888855 1.0892801106121774 0.9296338565618407 1.018030217265615 1.1341791482456467 1.0806801475890633 1.0 12.274435705674902 -5.365925640907777 3.398363414554505 1.0648128682702236 0.7279049796272662 0.6425974839074869 0.072007237165461 0.13369958381905697 2.4707860571172913 0.010824710962715825 0.09670285802463313 4.306003307669527e-06 5.365925640907777 -0.3369078886429574 NADSELMPPPPERGDPPRLS(ph)PDPVAGSAVSQELR ddPTM_A549_PD325901_60min_R1 4 NADSELMPPPPERGDPPRLSPDPVAGSAVSQELR 34 2 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 1 NADS(0.001)ELMPPPPERGDPPRLS(0.987)PDPVAGS(0.011)AVS(0.001)QELR;NADS(0.002)ELMPPPPERGDPPRLS(0.79)PDPVAGS(0.09)AVS(0.118)QELR;NADSELMPPPPERGDPPRLS(0.986)PDPVAGS(0.007)AVS(0.007)QELR;NADS(0.005)ELMPPPPERGDPPRLS(0.97)PDPVAGS(0.012)AVS(0.013)QELR 70.794 5.401e-05 222226000.0 9035.0 8027.699999999999 8030.099999999999 8161.200000000001 10735.800000000001 10110.199999999999 9023.300000000001 10170.8 10050.6 10142.4 9919.7 True False 9952.226548784534 8704.222452215596 8575.07087491403 8665.298788570006 9981.754444499375 10027.86588322613 9366.686619239224 9967.93541516175 9628.208233902988 9502.007133087192 8699.639786159254 1.1439814513490651 1.0005267650349883 0.9856811414831902 0.9960525954598852 1.1473756028818467 1.1526759877092871 1.0766752244318452 1.145787142936688 1.1067364247909488 1.0922299505094992 1.0 13.086739951200423 -5.2243677846334675 22.275410025884014 1.0615597975473214 1.1439821996548474 0.08700362003750561 0.06290991126297717 8179.345470477978 4914376.677610009 0.009668614130329916 2.4487606965498556 5.965298980444872e-06 5.2243677846334675 0.08242240210752594 NAEAVLQS(ph)PGLSGK ddPTM_A549_MK2206_60min_R1 2 NAEAVLQSPGLSGK 14 0 Q13045-3;Q13045;Q13045-2 Q13045-3 FLII Protein flightless-1 homolog 1 NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK 185.3 4.2991e-26 121404000.0 9829.2 10699.4 11346.3 10693.0 16537.0 10449.599999999999 12248.3 11444.8 16757.5 14314.300000000001 15463.5 True False 11488.128659132233 11243.953759167627 12955.375953034432 13312.785480027016 14104.42920643144 11555.369736116898 14473.65756543678 13067.135448230038 12961.953006228685 11080.689688286888 11623.486179111303 0.9883548259194112 0.9673477978899533 1.1145860848801699 1.145334994586355 1.2134422486584675 0.9941397579052644 1.2452079644958456 1.1242010569697354 1.1151519265814378 0.9533017476460822 1.0 13.504755214126972 -2.1208205335724566 17.515045821231883 1.0772770408495185 0.005407219467068014 0.0 0.09753647335236094 0.0 0.0 0.012359763258355942 0.0 0.007571457107937024 2.1208205335724566 -1.0718698213824505 NAEAVLQS(ph)PGLSGK ddPTM_A549_PD325901_60min_R1 2 NAEAVLQSPGLSGK 14 0 Q13045-3;Q13045;Q13045-2 Q13045-3 FLII Protein flightless-1 homolog 1 NAEAVLQS(0.997)PGLS(0.003)GK;NAEAVLQS(1)PGLSGK 189.67 2.2198e-26 203651000.0 11645.5 11759.900000000001 13471.5 12806.7 14181.2 13782.4 13205.5 14285.8 14389.8 13819.5 15118.400000000001 True False 12827.742587036015 12750.948044372642 14385.757000710384 13597.74077287401 13185.161434484098 13670.16070394016 13708.042528826867 14000.858512006704 13785.046747877454 12946.934411549375 13258.93264343379 0.9674792784612785 0.9616873686048388 1.0849860533709423 1.0255531978743408 0.9944361125489067 1.0310151707958197 1.0338722503138658 1.0559566813200711 1.0396799741421274 0.9764688274482692 1.0 13.694677021364674 -5.7044376035917725 24.999997771195893 1.025542261160096 0.9645827930713151 0.41850301522239297 0.028288775464715022 56.398681948139235 24734.44560458551 0.0035692678115329854 0.013823705322356784 1.9749786102063697e-06 5.7044376035917725 -0.06095946808878083 NAEEES(ph)ES(ph)EAEEGD ddPTM_A549_PD325901_60min_R1 2 NAEEESESEAEEGD 14 0 Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;H0Y503 Q7L1Q6-2 BZW1 Basic leucine zipper and W2 domain-containing protein 1 2 NAEEES(1)ES(1)EAEEGD;NAEEES(1)ES(1)EAEEGD 40.025 0.053374 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NAEEES(ph)ESEAEEGD ddPTM_A549_MK2206_60min_R1 3 NAEEESESEAEEGD 14 0 Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;H0Y503 Q7L1Q6-2 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 NAEEES(0.915)ES(0.085)EAEEGD;NAEEES(0.873)ES(0.127)EAEEGD;NAEEES(0.974)ES(0.026)EAEEGD 85.45700000000001 0.00017324 12783500.0 0.0 0.0 142.19 145.71 0.0 0.0 0.0 0.0 0.0 0.0 121.76 True False 0.0 0.0 162.35468009500607 181.40895654117048 0.0 0.0 0.0 0.0 0.0 0.0 91.52363159495543 0.0 0.0 1.773909942882497 1.982099632409793 0.0 0.0 0.0 0.0 0.0 0.0 1.0 6.5160723932895666 NAEEES(ph)ESEAEEGD ddPTM_A549_PD325901_60min_R1 4 NAEEESESEAEEGD 14 0 Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;H0Y503 Q7L1Q6-2 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 NAEEES(0.981)ES(0.019)EAEEGD;NAEEES(0.988)ES(0.012)EAEEGD;NAEEES(0.966)ES(0.034)EAEEGD;NAEEES(0.998)ES(0.002)EAEEGD 136.99 3.4203e-09 37042700.0 369.54 202.61 290.6 388.53 634.5799999999999 438.45 664.0699999999999 625.0899999999999 304.66999999999996 446.99 776.56 True False 407.05542875903024 219.68465575985684 310.3218635197594 412.528615684348 590.0092899821536 434.87940856763396 689.3415472430473 612.6220895763815 291.8657794184648 418.76697511620944 681.0480430194292 0.5976897414672074 0.3225685148229544 0.45565341050529445 0.6057261597220084 0.8663255052702965 0.6385443920220288 1.0121775611994255 0.8995284486250325 0.428553877233795 0.6148861000460473 1.0 9.411612763314732 -6.474436859297405 3.389591261292875 0.7598377609891153 0.44723037258358633 0.3915819244396982 0.17521983705025931 0.2571401616573325 5.914754944776044 0.0325724933146625 0.07836999965391427 3.3540006366157944e-07 6.474436859297405 -0.31260738840552893 NAEEESES(ph)EAEEGD ddPTM_A549_MK2206_60min_R1 2 NAEEESESEAEEGD 14 0 Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;H0Y503 Q7L1Q6-2 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 NAEEES(0.007)ES(0.993)EAEEGD;NAEEES(0.018)ES(0.982)EAEEGD 70.332 0.0017789000000000001 1645900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NAEEESES(ph)EAEEGD ddPTM_A549_PD325901_60min_R1 4 NAEEESESEAEEGD 14 0 Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;H0Y503 Q7L1Q6-2 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 NAEEES(0.013)ES(0.987)EAEEGD;NAEEES(0.021)ES(0.979)EAEEGD;NAEEES(0.006)ES(0.994)EAEEGD;NAEEES(0.041)ES(0.959)EAEEGD 120.14 2.3774e-06 11972800.0 674.3499999999999 473.62 716.6500000000001 724.73 626.7 917.86 634.38 541.14 865.0 769.6800000000001 564.55 True False 742.8095155697681 513.5336195695344 765.2861785665361 769.4949261187495 582.6827539976298 910.3852524755129 658.5216780460563 530.3465381838827 828.6470581185283 721.0822734455895 495.11392897730866 1.5002799802140316 1.0372029335354649 1.5456769316655796 1.5541774954871364 1.1768660098115205 1.8387389228898796 1.3300407027656795 1.071160610002125 1.673649254486043 1.456396661946138 1.0 8.95161672680216 -11.04526586238428 1.3313059327792796 0.998890019282597 1.435467795403782 0.0 0.2712446366013402 0.43292349290674154 1.3622039349255597 0.17001687834776866 0.03755486360437077 9.010193910136989e-12 11.04526586238428 0.436577776121185 NAET(ph)PEATTQQETDTDLPEAPPPPLEPAVIAR ddPTM_A549_MK2206_60min_R1 2 NAETPEATTQQETDTDLPEAPPPPLEPAVIAR 32 0 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 NAET(0.999)PEAT(0.001)TQQETDTDLPEAPPPPLEPAVIAR;NAET(0.994)PEAT(0.003)T(0.003)QQETDTDLPEAPPPPLEPAVIAR 94.45 2.7642e-09 29153000.0 551.13 891.44 289.05 890.77 944.71 792.14 967.23 974.71 1495.19 909.8399999999999 981.47 True False 644.1472701651765 936.8104883519063 330.04163641227603 1109.008689988185 805.7444104497702 875.9637290200238 1142.9631709720877 1112.8781274241833 1156.5318523277974 704.3065120886763 737.743911806019 0.873131258499016 1.2698315409456467 0.44736612682349935 1.5032434320919015 1.0921735815850842 1.1873547378732527 1.5492681846388674 1.5084883922658536 1.567660313856841 0.9546761427885091 1.0 9.526976299713937 -6.28806651566436 24.98951854635698 1.3049420607121405 0.9040816097778082 0.32657827075935353 0.27428650642391755 696.852198140912 653993.275776221 0.04041235508106472 0.09393370196982989 5.151497392473989e-07 6.28806651566436 -0.4008604509343323 NAET(ph)PEATTQQETDTDLPEAPPPPLEPAVIAR ddPTM_A549_PD325901_60min_R1 2 NAETPEATTQQETDTDLPEAPPPPLEPAVIAR 32 0 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 NAET(0.992)PEAT(0.006)T(0.002)QQETDTDLPEAPPPPLEPAVIAR;NAET(0.994)PEAT(0.005)T(0.001)QQETDTDLPEAPPPPLEPAVIAR 125.47 7.0296e-22 37211000.0 1187.8400000000001 1553.4 1182.79 1569.9299999999998 2698.7 2066.19 1620.3 2125.7 2204.51 2157.75 1809.81 True False 1308.4286423584094 1684.310469657775 1263.0612420940674 1666.9010105302775 2509.1526220095793 2049.3636336831114 1681.961403162182 2083.3012459206107 2111.862111090031 2021.509296756081 1587.2148433308346 0.824355094621355 1.0611735876431079 0.7957720704296605 1.050205028975295 1.5808525434049123 1.2911696499652427 1.059693594871201 1.3125515141659831 1.330545842589402 1.2736204586606952 1.0 10.632281707371774 -6.524727815727863 24.99992233869964 1.203279616809902 0.9125877059861895 0.48373988467383944 0.1620378871486185 51.66504072511915 698527.4520549803 0.026518483743153236 0.055503984655384773 2.9872542265794157e-07 6.524727815727863 -0.2906919108237125 NAGAVIGK ddPTM_A549_PD325901_60min_R1 2 NAGAVIGK 8 0 P61978-3;P61978;P61978-2;Q5T6W2;S4R457 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 98.99700000000001 0.006705199999999999 8508300.0 9583.5 9333.8 9345.400000000001 9893.0 12298.1 10833.4 10848.8 11595.599999999999 10682.3 11552.4 11526.5 False True 10556.409865000185 10120.392082973947 9979.63504245546 10504.06814136684 11434.32388214177 10745.17638220232 11261.657020691157 11364.316661427774 10233.360079698903 10822.979492455079 10108.81357250367 1.0442778264022983 1.0011453876745509 0.9872211977081484 1.0390999958628455 1.1311242214658637 1.0629512855425072 1.1140433978645388 1.124198856761897 1.0123205860214897 1.0706478475272276 1.0 13.303326063881768 -8.965625374464341 24.969022269842675 1.0054355119174356 1.0620091286716766 0.04748734364607188 0.048403570210223915 190.90841559189317 138672.84907652962 0.008423392221862515 0.008925307428859141 1.0823672064408075e-09 8.965625374464341 0.056573616754240996 NAGS(ph)SSDGTEDSDFSTDLEHTDSSESDGTSR ddPTM_A549_MK2206_60min_R1 1 NAGSSSDGTEDSDFSTDLEHTDSSESDGTSR 31 0 O95251-4;O95251;O95251-2;O95251-3;O95251-5 O95251-4 KAT7 Histone acetyltransferase KAT7 1 NAGS(0.556)S(0.146)S(0.165)DGT(0.028)EDS(0.033)DFS(0.036)T(0.036)DLEHTDSSESDGTSR 48.07 0.0031061 1160200.0 259.87 377.28 485.79 310.02 542.34 326.91 363.37 507.1 737.35 624.63 959.45 True False 303.7297027884969 396.4819405068284 554.6823267694846 385.97491391732666 462.5625044334538 361.5033992147045 429.3896254625348 578.9829779286183 570.3414023059958 483.5256491756242 721.1920855271019 0.4211495229686391 0.5497591397124794 0.7691187103974951 0.5351901686985748 0.641385996485774 0.5012581342326994 0.5953887099977038 0.8028138266457177 0.790831477149596 0.6704533492241904 1.0 9.494239754274522 -9.084015433189135 0.4428454039847408 1.000413646258754 0.5483547380140465 0.3319949681081489 0.13030569011363874 0.328216709958459 0.1599601298008679 0.052629088326403256 0.03772152418517818 8.241088287707379e-10 9.084015433189135 -0.4520589082447075 NAGSS(ph)SDGTEDSDFSTDLEHTDSSESDGTSR ddPTM_A549_PD325901_60min_R1 1 NAGSSSDGTEDSDFSTDLEHTDSSESDGTSR 31 0 O95251-4;O95251;O95251-2;O95251-3;O95251-5 O95251-4 KAT7 Histone acetyltransferase KAT7 1 NAGS(0.274)S(0.307)S(0.307)DGT(0.049)EDS(0.052)DFS(0.006)T(0.006)DLEHTDSSESDGTSR 58.672 0.00070255 2733000.0 321.28 158.99 469.0 227.18 347.54 571.51 400.85 283.32 370.0 486.16 326.36 True False 353.8961090861645 172.38864527545357 500.829160326108 241.21239263678535 323.1299893479119 566.8558120435365 416.10456610353657 277.6689603397596 354.4501867096596 455.4637746314156 286.2197889664945 1.2364487807221196 0.6022946418133016 1.7498061966104523 0.8427523250847697 1.1289575417363549 1.980491335313974 1.4537938400627033 0.9701249565670812 1.2383846273856078 1.591307771821232 1.0 8.160979611863283 -4.2178568169800315 16.44077394915442 1.1751934264349084 1.1543125516264006 0.0 0.3989546473691328 0.0 0.0 0.04725446545990462 0.0 6.055404831478744e-05 4.2178568169800315 -0.020880874808507865 NAGVEGS(ph)LIVEK ddPTM_A549_MK2206_60min_R1 1 NAGVEGSLIVEK 12 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 1 NAGVEGS(1)LIVEK 107.61 0.00012776 3732900.0 1906.1 3231.8 2729.5 2597.4 3608.2 2667.7 2744.3 2925.2 3411.4 3830.1 3875.1 True False 2227.8030803292195 3396.284815866118 3116.5841431839017 3233.7631166017172 3077.438559753638 2949.9942433240567 3242.9037872054223 3339.856058049288 2638.723346886383 2964.877749880025 2912.8057226807778 0.7648306452374306 1.1659839821862112 1.069959496068134 1.1101883971944235 1.0565203630956004 1.012767250611226 1.1133264954659734 1.1466113349212586 0.9059043403889823 1.0178769310956046 1.0 11.508193764969082 -8.773463643116695 24.994036751586666 0.9555659395161394 1.0616436685663766 0.09410274439472799 0.1053305358248695 266.9510739546874 554891.6255644531 0.017066614637454486 0.018236312804200544 1.6847534596991483e-09 8.773463643116695 0.10607772905023716 NAGVEGS(ph)LIVEK ddPTM_A549_PD325901_60min_R1 2 NAGVEGSLIVEK 12 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 1 NAGVEGS(1)LIVEK;NAGVEGS(1)LIVEK 141.55 1.0989000000000002e-11 14719100.0 9029.3 8480.1 9690.9 9532.9 10625.5 10181.0 9833.3 10660.7 10491.5 11261.0 10947.4 True False 9945.94788898066 9194.747787913539 10348.582750115742 10121.725582213267 9879.201535985027 10098.089311499787 10207.51161248822 10448.06397534264 10050.578740174034 10549.978538185718 9600.939201286308 1.0359348893333402 0.9576925335264753 1.0778719178566682 1.054243274538931 1.0289828243742485 1.0517814038596216 1.0631784452005117 1.088233531771854 1.0468328701454004 1.0988485935597072 1.0 13.228959827450176 -4.072310503346428 12.050021010869838 1.032922530177903 1.0400097877636223 0.0 0.040578980643309316 0.0 0.0 0.004950622226624631 0.0 8.466218965956575e-05 4.072310503346428 0.007087257585719264 NAGVEGSLIVEK ddPTM_A549_MK2206_60min_R1 1 NAGVEGSLIVEK 12 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 112.44 0.00013892 6184100.0 2932.7 3406.4 3147.9 3144.4 5244.2 3363.9 3776.6 3078.1 5765.9 5050.8 4888.4 False True 3427.6680623689717 3579.7712100892195 3594.319554617551 3914.778141157481 4472.785126949733 3719.8656652238983 4462.759334897789 3514.4301012859014 4459.932856250277 3909.820772067055 3674.4753670234877 0.932831961027829 0.9742264820213006 0.9781857804449328 1.0653978459865554 1.217258160740622 1.0123528650124491 1.2145296645471464 0.9564440498978685 1.2137604448993897 1.0640487094173143 1.0 11.843322564699772 -6.291895032231278 3.4784856251073437 1.1017063438426757 0.9596564325392178 0.32077802655100807 0.0857297621146346 0.23310739727478239 5.908904967799351 0.013430124962275407 0.03534704817583668 5.106284025268689e-07 6.291895032231278 -0.1420499113034579 NAGVEGSLIVEK ddPTM_A549_PD325901_60min_R1 1 NAGVEGSLIVEK 12 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 103.97 0.00051563 5734900.0 6869.6 6816.4 7242.9 7729.5 8896.8 7860.1 8461.5 9057.2 7830.5 9085.8 8138.3 False True 7566.996734867772 7390.841950157877 7734.446749095887 8206.93366003184 8271.91946029378 7796.089951607845 8783.507012810465 8876.547040764053 7501.411316297267 8512.121037407675 7137.340692934252 1.060198337226478 1.0355176063648726 1.0836594583123589 1.1498587517556018 1.158963795644886 1.0922961768275592 1.2306414098329181 1.2436770812344102 1.0510092818917043 1.1926180076893924 1.0 12.801170924215864 -8.971314426823104 15.654831540615541 1.0224970903408148 1.131566493371304 0.0 0.08038155795841083 2.5128215870037565 1371.255962845743 0.011894233132430309 0.012439302029410609 1.0682811694677053e-09 8.971314426823104 0.10906940303048929 NAIAKDNDIHS(ph)EVSTAELGK ddPTM_A549_PD325901_60min_R1 1 NAIAKDNDIHSEVSTAELGK 20 1 F8W1R0;B7Z493;E9PJX4;F8VWL3;Q96M96 F8W1R0 FGD4 FYVE, RhoGEF and PH domain-containing protein 4 1 NAIAKDNDIHS(0.968)EVS(0.016)T(0.016)AELGK 51.503 0.00355 7873200.0 3211.5 3889.1 3884.5 3702.4 4889.5 4523.6 3837.9 4736.6 4692.6 4393.8 4242.4 True False 3537.5291158186556 4216.848105797636 4148.125529396094 3931.0888392395204 4546.078387859281 4486.761301394801 3983.953384679462 4642.124797209181 4495.386340956077 4116.3747181494 3720.611694789362 0.9507923443806002 1.1333749532914823 1.1149041796555808 1.0565705754096637 1.221863166808288 1.2059203350025522 1.070779138349456 1.247677849239247 1.208238512836954 1.1063704185831313 1.0 11.861324114729658 -5.25905875434503 23.87050711533304 1.1221762373882276 0.9507922289979825 0.31951867269874834 0.07532284765966323 138.937651557468 1392945.702527316 0.012795475263324784 0.11821271427693536 5.507331843915826e-06 5.25905875434503 -0.17138400839024504 NALESYAFNMK ddPTM_A549_PD325901_60min_R1 3 NALESYAFNMK 11 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 0 ;; 104.43 0.00053695 9085400.0 8564.2 8173.9 8747.6 10368.8 10860.5 10566.5 10237.7 10764.8 11120.1 11391.7 11540.2 False True 9433.631279369178 8862.74323930454 9341.264739592038 11009.257226746628 10097.695946691012 10480.449927311907 10627.301275784404 10550.087619177768 10652.760868189416 10672.426117880317 10120.828559355128 0.932100689587243 0.875693446176629 0.9229743083591209 1.087782206978527 0.9977143558426613 1.0355327991031293 1.050042613947958 1.0424134306104669 1.0525581779905362 1.0545012253977293 1.0 13.305039783172713 -6.139498196920205 5.936599747289975 1.030457180247421 0.9031852558453615 0.8081881779685222 0.027939126880827697 0.07541169087847865 3.3560459188024407 0.003988945193038364 0.01076761468502848 7.252734892353302e-07 6.139498196920205 -0.12727192440205948 NALFPEVFS(ph)PTPDENSDQNSR ddPTM_A549_MK2206_60min_R1 1 NALFPEVFSPTPDENSDQNSR 21 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 NALFPEVFS(0.818)PT(0.167)PDENS(0.012)DQNS(0.002)R 46.178000000000004 0.0061573 4902900.0 320.39 261.46 442.41 352.85 431.83 297.74 305.79 314.32 702.61 575.51 511.35 True False 374.46399921655626 274.76719721404623 505.15039046931287 439.2982658400382 368.30837904174183 329.2466491761837 361.3480847901272 358.8758225646286 543.469956837615 445.5018912909458 384.3676824579536 0.97423382949871 0.7148550977464223 1.3142374177739873 1.1429115554950267 0.9582189030214097 0.8565929556582853 0.9401104756762568 0.9336784515016723 1.4139324965154054 1.1590513761252021 1.0 8.586343229534485 -8.72347162725906 24.999875449196946 1.1954683359380116 0.9810480085448723 0.23645103709305082 0.16930632173714108 201.9324431725751 132962.3205102179 0.03447097249384466 0.03908600640715299 1.8902897210098143e-09 8.72347162725906 -0.21442032739313932 NALFPEVFS(ph)PTPDENSDQNSR ddPTM_A549_PD325901_60min_R1 2 NALFPEVFSPTPDENSDQNSR 21 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 NALFPEVFS(0.995)PT(0.005)PDENSDQNSR;NALFPEVFS(0.802)PT(0.196)PDENS(0.001)DQNS(0.001)R 91.175 7.612e-07 10757400.0 1291.0500000000002 1301.7 1273.3899999999999 1523.0 1738.47 1420.76 1507.02 1158.57 1452.15 1365.53 1956.78 True False 1422.116445579223 1411.3988273165478 1359.8099029161262 1617.0722510160408 1616.365864595915 1409.1898016114765 1564.3704707729867 1135.461412469418 1391.1211854876547 1279.310202757193 1716.108465050425 0.828686807705617 0.8224415041709361 0.7923799285473314 0.9422902362809136 0.9418786152007127 0.8211542745172985 0.91158018425544 0.6616489782515317 0.8106254434487502 0.7454716463505137 1.0 10.744925024588767 -10.711099013612873 1.0478032308212621 0.9970031392951786 0.8379126653257775 0.0 0.10531629213630474 0.427294759648836 0.8575701745179708 0.047828073105541706 0.01344748516478559 1.9449166148447314e-11 10.711099013612873 -0.15909047396940112 NALLS(ph)LAK ddPTM_A549_MK2206_60min_R1 3 NALLSLAK 8 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 NALLS(1)LAK;NALLS(1)LAK;NALLS(1)LAK 87.29799999999999 0.0027140000000000003 7866010.0 2798.8599999999997 3817.54 3698.0699999999997 3242.8599999999997 4857.93 3559.12 3180.86 3079.16 5354.23 4497.63 4342.39 True False 3271.2391424428097 4011.836479968295 4222.511933461842 4037.360845577518 4143.334932260958 3935.74371604735 3758.7810882812537 3515.6403595320126 4141.505453948369 3481.6122592603037 3264.0547191328706 1.002201073182942 1.2290959635119354 1.2936400571690156 1.2369157973706042 1.2693828041466406 1.2057836202859125 1.1515680378298965 1.0770776417822978 1.26882231160898 1.066652540734743 1.0 11.672449527743531 -10.925649597470988 1.0283112461840143 0.9927100586201719 1.202260732546216 0.32682550158947266 0.08585982180291227 0.44046880800873506 0.777849785724404 0.07090471042607852 0.014478826988130794 1.1867258499688138e-11 10.925649597470988 0.2095506739260441 NALLS(ph)LAK ddPTM_A549_PD325901_60min_R1 2 NALLSLAK 8 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 1 NALLS(1)LAK;NALLS(1)LAK 94.69200000000001 0.0025285999999999998 12556400.0 1269.5500000000002 1720.96 1866.79 1716.4299999999998 1830.13 2158.64 2260.94 2138.63 2164.63 1910.25 2185.86 True False 1398.433781406687 1865.9913389096444 1993.4815953202033 1822.4499828046362 1701.587982405749 2141.06075153481 2346.98130893384 2095.973346927222 2073.658128803596 1789.6364889946951 1917.0130773081912 0.7294857807492494 0.9733847729040065 1.0398894086415866 0.9506716487107446 0.8876246085890372 1.1168733155129122 1.2242907138794257 1.093353703079752 1.0817130844591634 0.9335546586399117 1.0 10.904644463349593 -7.258393169707357 24.98354942008303 1.0644173572415723 0.9281730254787667 0.3865761482418658 0.0985687839934777 255.44992254266245 2095073.9841565124 0.014389423043989845 0.024259277355829573 5.515778660397178e-08 7.258393169707357 -0.1362443317628056 NALLSLAK ddPTM_A549_MK2206_60min_R1 2 NALLSLAK 8 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 124.23 0.0031084 18924500.0 3251.5 3742.3599999999997 4657.6 3536.8 5717.0 4519.2 4027.75 3951.9799999999996 5502.2 4790.0 5401.3 False True 3800.273708457297 3932.8301390880406 5318.1177158063165 4403.3161587729865 4876.036873264108 4997.418744397823 4759.540038959532 4512.185267431159 4255.960485207906 3707.935673200523 4060.0081417036204 0.9360261299531936 0.9686754316304858 1.3098785840303218 1.084558455324996 1.2009918953556762 1.2308888479964613 1.1722981513437016 1.111373452945294 1.0482640272297734 0.9132828171237696 1.0 11.987266905171962 -8.853430799689558 2.066634224535647 1.0185247507952373 1.135215518753942 0.2403986616761402 0.10747006890336934 0.3746278617252583 3.1342389530755703 0.019881820510835535 0.020819563243862565 1.401422869314499e-09 8.853430799689558 0.11669076795870481 NALLSLAK ddPTM_A549_PD325901_60min_R1 2 NALLSLAK 8 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 146.81 0.0022286 43182000.0 7132.0 6722.5 7993.5 8203.4 9262.400000000001 8837.0 8671.6 9416.2 8735.9 8734.7 8826.3 False True 7856.035389699093 7289.0286676157975 8535.98697882036 8710.10538672685 8611.840977545316 8765.034401898012 9001.602483281593 9228.386504134001 8368.76050291058 8183.189551326768 7740.721054525581 1.0148971051096194 0.9416472465900702 1.102737964421264 1.1252317872421616 1.1125373097523568 1.1323278981579592 1.1628894026634433 1.1921869344120937 1.0811344891465657 1.0571611473510598 1.0 12.918252245519646 -3.8915555106361737 11.618465441522947 1.0674017434819423 0.6008478900114411 0.0 0.07320097365393426 0.0 0.0 0.010962432518345847 0.0 0.0001283643687264527 3.8915555106361737 -0.46655385347050116 NALPPVLTTVNGQS(ph)PPEHSAPAK ddPTM_A549_MK2206_60min_R1 4 NALPPVLTTVNGQSPPEHSAPAK 23 0 Q6PKG0;A0A0B4J210;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLT(0.001)T(0.001)VNGQS(0.997)PPEHSAPAK;NALPPVLT(0.007)T(0.006)VNGQS(0.987)PPEHSAPAK 252.2 1.2811999999999999e-110 655146000.0 9097.93 10978.7 12081.8 11298.7 15570.3 11799.5 12477.199999999999 13243.250000000002 19733.7 15440.3 15270.6 True False 10633.43816096722 11537.468936180878 13795.180912665053 14066.882007217917 13279.929495851684 13048.115258125805 14744.145732507191 15120.521243252168 15264.048458243471 11952.325506245934 11478.488572880473 0.9263796442756582 1.0051383388088004 1.2018290409120664 1.2254995000346025 1.1569406034194576 1.1367450666766175 1.284502366221132 1.3172920064560159 1.3297960233463935 1.0412804290701623 1.0 13.48664506755922 -5.652610250242167 3.807389424597468 1.1838541527445188 0.9421860023211296 0.4321341929179048 0.09962827934754184 0.20398986626794333 5.375050718787867 0.017991265484615042 0.08134662405064982 2.225306055631201e-06 5.652610250242167 -0.24166815042338918 NALPPVLTTVNGQS(ph)PPEHSAPAK ddPTM_A549_PD325901_60min_R1 3 NALPPVLTTVNGQSPPEHSAPAK 23 0 Q6PKG0;A0A0B4J210;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 NALPPVLTTVNGQS(0.999)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLT(0.035)T(0.035)VNGQS(0.931)PPEHSAPAK 274.84 4.3724999999999986e-126 1156268700.0 18230.2 18838.9 21087.800000000003 22411.600000000002 27097.7 26207.5 25757.6 27985.3 25557.5 23481.9 25579.9 True False 20080.916483636072 20426.520218125297 22518.944919242887 23795.913631563435 25194.451033990073 25994.074809068923 26737.819563099554 27427.111237456847 24483.40715360034 21999.248826553885 22433.734464346227 0.8951214304310559 0.9105269677943731 1.00379831788738 1.0607201252819547 1.1230609452934122 1.15870475557162 1.191857717920027 1.2225833947106113 1.0913656481274503 0.980632487271218 1.0 14.453382180300549 -5.945818648271011 1.9771414414714834 1.0827661583428203 0.8929411395067027 0.5333423846198599 0.07166609346921175 0.26570763831126143 1.9751648287296912 0.012122958891323926 0.055801795565407604 1.1328733272168477e-06 5.945818648271011 -0.18982501883611758 NALQQENHIIDGVK ddPTM_A549_PD325901_60min_R1 1 NALQQENHIIDGVK 14 0 Q9GZT3-2;Q9GZT3;H0YJW7;A0A087WUN7;H0YJ40;G3V4X6;G3V2S9 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 0 70.889 0.0023029 2288900.0 1261.9 1254.7 1375.0 1174.5 1952.9 1473.4 1370.8 1555.8 1600.4 1990.3 1357.5 False True 1390.0071590383186 1360.4379723700329 1468.315768546692 1247.0461975169665 1815.735041139255 1461.4011189042126 1422.9665441305428 1524.7683484985107 1533.1407535409166 1864.6321183332766 1190.5361059015079 1.1675472521564272 1.1427103853686742 1.2333231737099157 1.0474660880382687 1.5251406758170754 1.2275151603214907 1.195231742302374 1.2807409543819863 1.2877734206809115 1.5662121535754046 1.0 10.217395659167998 -10.794138386033787 0.9894351481039471 0.9969429933407593 1.2371179800787864 0.0 0.201688428552289 0.4698832552843945 0.7998723388090869 0.08072888261312416 0.01922529285144789 1.6064292897952073e-11 10.794138386033787 0.24017498673802706 NALTALFTSSGRPPSQPNTQDKT(ph)PSK ddPTM_A549_MK2206_60min_R1 2 NALTALFTSSGRPPSQPNTQDKTPSK 26 2 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 NALTALFTSSGRPPS(0.001)QPNT(0.003)QDKT(0.61)PS(0.386)K;NALTALFTSSGRPPS(0.001)QPNT(0.007)QDKT(0.959)PS(0.032)K 81.446 1.0958e-06 20526000.0 4492.1 6395.9 6889.1 6042.8 8006.700000000001 7231.3 6492.0 6526.2 9185.400000000001 8925.5 9731.9 True False 5250.256658699376 6721.4239909023145 7866.077970620339 7523.286271271604 6828.925036411353 7996.511366251551 7671.512366190873 7451.308835649274 7104.921566069695 6909.223350971036 7315.200643223936 0.7177187495961146 0.9188297517346108 1.0753058397525543 1.0284456487520157 0.933525322061669 1.0931363001859304 1.048708400540864 1.0186062145200918 0.9712545031353278 0.9445022341760432 1.0 12.83668172018297 -5.34002448680185 3.093844022544827 1.003268623647241 0.6966151846952849 0.7534093744397526 0.048927830946737014 0.10559532164195064 1.5816883169145117 0.006445610350594635 0.07022161469202294 4.57062418363195e-06 5.34002448680185 -0.30665343895195607 NALTALFTSSGRPPSQPNTQDKT(ph)PSK ddPTM_A549_PD325901_60min_R1 1 NALTALFTSSGRPPSQPNTQDKTPSK 26 2 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 NALTALFTSSGRPPSQPNT(0.001)QDKT(0.989)PS(0.01)K 114.35 2.1388e-17 16407000.0 4749.1 5277.2 6008.1 6309.8 7281.3 6549.4 6429.9 6812.6 7996.6 7076.6 6699.8 True False 5231.225135897361 5721.928164335009 6415.845795640277 6699.5420154044705 6769.886607121334 6496.063857846649 6674.593363076288 6676.717348618686 7660.530710925579 6629.782268299886 5875.767073531433 0.8903050564176479 0.9738180722157244 1.0919162920092147 1.140198706239377 1.152170690635039 1.1055686477276245 1.13595268150491 1.1363141637617484 1.303749895981066 1.1283262568669654 1.0 12.52056149054238 -5.6520456816505 1.668582460043416 1.143454173892461 0.8747744851707928 0.5951457215543053 0.0662071239625354 0.40307615382427486 1.7644500056538888 0.014902446125457915 0.13647853646271849 2.2282007616688213e-06 5.6520456816505 -0.26867968872166825 NALTTLAGPLT(ph)PPVK ddPTM_A549_MK2206_60min_R1 2 NALTTLAGPLTPPVK 15 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4;H7C0W2 H0Y3X6 NELFA Negative elongation factor A 1 NALTTLAGPLT(1)PPVK;NALTTLAGPLT(1)PPVK 151.56 3.9274e-14 4349500.0 2780.4 3251.9 2874.2 3390.2 5175.3 3822.8999999999996 3522.2 3871.5 5557.700000000001 4952.0 4729.8 True False 3249.6635457464763 3417.4078200120775 3281.804779021497 4220.799152191863 4414.020225678456 4227.436740564358 4162.138147904725 4420.296980971494 4298.889823823195 3833.339760686632 3555.260124160811 0.9140438202151332 0.9612258177082691 0.9230842932473582 1.1871984059642182 1.2415463486572162 1.1890653828212383 1.170698627540555 1.2433118327775996 1.2091632324197126 1.078216396779535 1.0 11.79573940459331 -6.254935613361532 24.788230000612916 1.1375896819219329 0.9356287437974973 0.6616508895062836 0.07201547015199954 329.4696182923852 1255724.3681315412 0.013988905543231636 0.036074498017524895 5.55986679362561e-07 6.254935613361532 -0.2019609381244356 NALTTLAGPLT(ph)PPVK ddPTM_A549_PD325901_60min_R1 2 NALTTLAGPLTPPVK 15 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4;H7C0W2 H0Y3X6 NELFA Negative elongation factor A 1 NALTTLAGPLT(1)PPVK;NALTTLAGPLT(1)PPVK 149.3 7.5574e-14 6554100.0 6004.4 5518.6 5356.4 6235.1 7950.799999999999 5834.4 5788.7 7063.9 7616.9 6257.0 6422.3 True False 6613.962267794343 5983.6717895283855 5719.917514649821 6620.227966060486 7392.363236770949 5786.886580789154 6008.992146198187 6923.004972977648 7296.788181483257 5861.931952173696 5632.3978143139975 1.1742711516196225 1.0623666841006278 1.0155386219548277 1.1753835904907228 1.3124717891879425 1.0274285964110248 1.0668621685292052 1.2291399153986855 1.2955029850589443 1.0407524726460848 1.0 12.459533519288836 -6.286249485585299 24.282441977052038 1.1498002571608656 1.0818895736887206 0.055943525331715205 0.10623457835349422 1324.377552496051 1296207.875331478 0.018117376358322217 0.04211925648929933 5.173095719939808e-07 6.286249485585299 -0.06791068347214502 NAMS(ph)LPQLNEK ddPTM_A549_MK2206_60min_R1 7 NAMSLPQLNEK 11 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK 169.79 4.8574e-15 105789100.0 25295.4 29035.0 32466.5 29785.0 43395.9 35388.2 32529.700000000004 33909.600000000006 52420.5 44517.50000000001 43657.1 True False 29564.6451068463 30512.757481487955 37070.73789510172 37082.32633709945 37012.420596201104 39132.95583521401 38439.92541874294 38716.389643794675 40547.340448337185 34460.96583125348 32815.83719533612 0.9009261269448311 0.9298180418150208 1.1296599771152669 1.1300131127652502 1.1278828687467226 1.1925021325000873 1.1713833534073643 1.1798080729537859 1.2356028038224143 1.050132154975195 1.0 15.002104619054698 -5.742882251237793 5.199199311513846 1.1308904952880776 0.9097775689256741 0.6499478073983496 0.06225736848219896 0.11065066426272523 8.17510518434263 0.012069185416900377 0.045953586643955116 1.8076641653154897e-06 5.742882251237793 -0.22111292636240354 NAMS(ph)LPQLNEK ddPTM_A549_PD325901_60min_R1 6 NAMSLPQLNEK 11 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK 143.94 2.5358e-11 158862400.0 29658.699999999997 29784.3 34327.1 34414.5 39045.799999999996 38057.6 36539.5 38470.799999999996 38314.4 36147.299999999996 37138.9 True False 32669.62939041905 32294.32748900994 36656.743431621224 36540.2055039997 36303.35770869739 37747.67152355706 37930.030667681625 37703.46971424121 36704.179009915046 33864.95330906317 32571.050742884345 1.00302657253255 0.9915040120732102 1.1254393885229343 1.121861428188112 1.1145897009978538 1.15893318338229 1.1645319939814356 1.1575760945470304 1.1268957608907857 1.039725539602418 1.0 14.99130264141089 -5.750985857819187 24.78948949063478 1.0921735243185704 0.9972652296112767 0.38323063189235174 0.051327243783033584 217.17932769803494 515007.2136094763 0.009474429306956552 0.035892464958915564 1.7742472557825709e-06 5.750985857819187 -0.09490829470729367 NAMS(ph)LPQLNEKEAAEK ddPTM_A549_MK2206_60min_R1 1 NAMSLPQLNEKEAAEK 16 1 Q9H3Q1 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 NAMS(1)LPQLNEKEAAEK 42.64 0.017225999999999998 11056000.0 3065.7 3386.7 4071.2 3473.6 4420.7 3107.7 3096.5 2774.5 5735.2 5389.3 5516.6 True False 3583.1152108311658 3559.0685642347216 4648.557378175601 4324.632155935832 3770.4208860658796 3436.5547512756953 3659.093968254778 3167.793871549893 4436.186357232447 4171.853386968595 4146.675969585504 0.8640933695114182 0.8582943519916462 1.1210322225009215 1.0429153827440527 0.9092634470888655 0.8287492865325593 0.8824161798734748 0.7639357149641334 1.0698174609664237 1.0060717108276023 1.0 12.017739600935029 NAMS(ph)LPQLNEKEAAEK ddPTM_A549_PD325901_60min_R1 2 NAMSLPQLNEKEAAEK 16 1 Q9H3Q1 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 NAMS(1)LPQLNEKEAAEK;NAMS(1)LPQLNEKEAAEK 107.33 1.6592e-07 51552000.0 8952.0 10213.2 12247.8 13402.0 12890.3 18650.6 15973.3 19365.4 16464.7 16175.900000000001 14139.400000000001 True False 9860.800449885906 11073.90220722852 13079.009360004495 14229.811101849624 11984.929797120873 18498.71569718671 16581.172672425157 18979.141905137585 15772.745916536558 15154.550913403646 12400.343437041458 0.7952038183418693 0.8930318957255101 1.054729606999091 1.1475336287334836 0.9664998278451151 1.491790593632158 1.3371543100084642 1.5305335696142408 1.2719604095336012 1.2221073545539882 1.0 13.598092457262828 -5.7754363242990765 1.0868339801769737 1.196113799196399 0.7430503300044367 0.4545675475308668 0.16864140539602868 0.8077368989016972 1.26594788352234 0.030299423048835466 0.33941680436284605 1.677118214648399e-06 5.7754363242990765 -0.4530634691919624 NANGFSGAPAEPDLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NANGFSGAPAEPDLSPR 17 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 NANGFSGAPAEPDLS(1)PR;NANGFSGAPAEPDLS(1)PR 132.51 3.7216e-12 16834000.0 2155.6 2597.4 2187.0 2914.7 3246.0 2285.0 2385.5 2560.6 3385.8999999999996 3177.0 3907.2 True False 2519.4125806398747 2729.596565607604 2497.149485672537 3628.8016308458546 2768.5176999501996 2526.7971833397573 2818.9144715878483 2923.5728915086156 2618.999056171249 2459.3134934776735 2936.9344067658467 0.8578375379565432 0.929403312283517 0.85025715246477 1.2355746258704812 0.9426556117740785 0.8603519293855348 0.9598152635257653 0.995450523094268 0.8917458456470234 0.8373743342078486 1.0 11.520095329660785 -8.88520560179955 0.004004890162622123 1.9038596008324737 4.3264218035760106e-06 0.0 0.10920052197114698 37799.69321304247 112.9710739139736 26916.692543946992 26782.676424726345 1.302549984930868e-09 8.88520560179955 -1.9038552744106703 NAPAAVDEGSIS(ph)PR ddPTM_A549_MK2206_60min_R1 4 NAPAAVDEGSISPR 14 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 NAPAAVDEGSIS(1)PR;NAPAAVDEGSIS(1)PR;NAPAAVDEGSIS(1)PR;NAPAAVDEGS(0.001)IS(0.999)PR 213.69 2.1484e-38 155482000.0 22775.899999999998 28833.500000000004 25398.8 23964.2 36684.2 28333.9 25669.100000000002 26408.600000000002 42493.2 36316.5 35677.5 True False 26619.915102707226 30301.00199216402 29000.731758893307 29835.430075793814 31288.00277526589 31332.174491479363 30332.843203787746 30152.09992294559 32868.55804769666 28112.577427095344 26817.792101092484 0.9926214284293301 1.129884290173524 1.0813989328268339 1.1125237291469048 1.166688244033009 1.1683353489119999 1.1310716068438784 1.1243319289404616 1.2256250598034013 1.0482808324086499 1.0 14.710902845131718 -5.258054373374545 23.100623802363494 1.118567237485363 0.9926212943203176 0.2812881640764998 0.05798739493900865 155.577256774579 1061563.532215721 0.010875100623495913 0.10662361967027774 5.5200832388653325e-06 5.258054373374545 -0.12594594316504537 NAPAAVDEGSIS(ph)PR ddPTM_A549_PD325901_60min_R1 3 NAPAAVDEGSISPR 14 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 NAPAAVDEGSIS(1)PR;NAPAAVDEGSIS(1)PR;NAPAAVDEGSIS(1)PR 217.79 9.791899999999999e-39 165466000.0 31816.1 34883.0 33869.2 33320.4 37603.8 35388.0 32908.8 35227.0 41576.0 36025.4 40663.0 True False 35046.04705022509 37822.71283189915 36167.767584044836 35378.52543188108 34962.63881406744 35099.811860854 34161.16239238636 34524.3698499531 39828.70530443461 33750.75009586676 35661.70878399486 0.9827360562697971 1.0605973219341123 1.0141905370579747 0.9920591760246532 0.9803971824748576 0.9842436904371493 0.9579227568511257 0.9681075592610918 1.116847920711806 0.9464142702834883 1.0 15.122088213054456 -8.738054380397628 24.999958308708603 1.0551782028438879 0.9936724488744632 0.0 0.048520166963376306 239.2696567323274 255793.45512030515 0.008236216225964205 0.009336481558354698 1.827871324003774e-09 8.738054380397628 -0.061505753969424704 NAPLPS(ph)LQNGPNTPNKPSSPPPPQQFVVQHSLFGSPVAK ddPTM_A549_PD325901_60min_R1 1 NAPLPSLQNGPNTPNKPSSPPPPQQFVVQHSLFGSPVAK 39 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 NAPLPS(0.326)LQNGPNT(0.169)PNKPS(0.252)S(0.252)PPPPQQFVVQHS(0.001)LFGSPVAK 50.645 0.0020483 3458500.0 856.0 806.36 864.24 1052.0 1331.1 894.3 878.09 998.26 1561.0 942.81 816.4 True False 942.9004898461055 874.3147871206661 922.8925234973048 1116.9796507346516 1237.6081280457083 887.0171173042204 911.5061954592852 978.3489211801794 1495.396598523725 883.2808156990385 715.9879755859973 1.3169222417099848 1.2211305453909151 1.2889776853332868 1.5600536445049435 1.7285320008800331 1.2388715279446487 1.2730747254704478 1.3664320554817333 2.088577810681561 1.2336531419764711 1.0 9.483791548621632 -6.209297645698368 7.278234635218896 1.4946357591936676 1.2686647401775812 0.03232405334195443 0.27967574075961515 0.6862357011610184 83.09112157845371 0.05504056389548363 0.14616260065639475 6.175929848991615e-07 6.209297645698368 -0.2259710190160864 NAPLRT(ph)SIR ddPTM_A549_MK2206_60min_R1 1 NAPLRTSIR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 NAPLRT(0.5)S(0.5)IR 72.289 0.0010762 19847000.0 1263.5 2178.8 2125.4 2057.4 2911.7 2459.2 1777.9 2105.3 2899.2 2307.0 2560.0 True False 1476.7479103908342 2289.691613592764 2426.8136794002803 2561.4630923601953 2483.3927871056676 2719.4309117151543 2100.921416489642 2403.732722210845 2242.535829071055 1785.847097718915 1924.2813475943308 0.7674282725013225 1.1898944073096465 1.2611532520617101 1.3311271221136383 1.290555973122287 1.413218973989896 1.091795344332647 1.2491586665411 1.1653887472715956 0.9280592466125177 1.0 10.910104034448107 -10.052653357902827 0.7265387984200017 1.0075921568363229 1.2121833860587723 0.21940810486820084 0.16143237661454657 0.8085770515602193 0.8480921197556704 0.08260475710166074 0.03335407587438271 8.858223671663522e-11 10.052653357902827 0.20459122922244943 NAPLRT(ph)SIR ddPTM_A549_PD325901_60min_R1 1 NAPLRTSIR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 NAPLRT(0.874)S(0.126)IR 71.03 0.001302 42367000.0 1342.3 1280.1 1686.6 1721.5 1971.2 1826.2 1998.9 1820.0 1743.2 1648.2 1892.9 True False 1478.569307850967 1387.978519511341 1801.0628183497106 1827.833145189833 1832.749712270827 1811.3280326746794 2074.9692333400517 1783.6986722376198 1669.939366141292 1544.1323707164286 1660.0853000817422 0.8906586352991396 0.8360886753487892 1.0849218520644852 1.1010477263426348 1.1040093615554472 1.0911053983704875 1.2499172381310049 1.0744620605638704 1.0059358793545516 0.9301524268905916 1.0 10.697041658067551 -5.759503766499928 24.997757662657122 1.0473963120707876 0.8633736022091458 0.4825264022325053 0.07997153734634957 35.834405094968105 462750.84408886405 0.011859391483273828 0.04174818497085331 1.7397876093401944e-06 5.759503766499928 -0.18402270986164182 NAPLRTS(ph)IR ddPTM_A549_MK2206_60min_R1 1 NAPLRTSIR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 NAPLRT(0.118)S(0.882)IR 58.172 0.0033315 23338000.0 1812.0 1980.2 2073.8 1908.6 2916.6 1980.3 1775.7 2047.2 2687.2 2753.9 2297.9 True False 2117.8213008533353 2080.9837218819494 2367.8960234968963 2376.2070856803084 2487.572003596658 2189.854031583247 2098.3217049669024 2337.396869287057 2078.5534905766203 2131.7920773333863 1727.268011186333 1.2261104166450463 1.2047833390098361 1.3708909145318815 1.3757025952494002 1.4401771974507465 1.2678136904065036 1.2148211460974836 1.3532334612517205 1.2033763591493918 1.2341987830071695 1.0 10.754276240377788 -9.77402462723185 0.5725464230516838 1.0013724799884691 1.3176689493011506 0.25759935886697083 0.0987625718622283 0.33146702453556337 0.2282917228860992 0.046203226494913575 0.020161916423828006 1.682578645560866e-10 9.77402462723185 0.3162964693126815 NAPLRTS(ph)IR ddPTM_A549_PD325901_60min_R1 1 NAPLRTSIR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 NAPLRT(0.043)S(0.957)IR 70.685 0.00096046 29551000.0 2350.4 2772.1 3375.7 3676.0 4362.8 3539.9 3753.5 3357.3 3089.0 3286.3 3731.0 True False 2589.01087772697 3005.714595685797 3604.7953017331442 3903.058171198272 4056.371978842922 3511.0722280501036 3896.3414964940102 3290.3360177491 2959.180072286858 3078.802457156533 3272.110652757663 0.7912357351194736 0.9185858654115645 1.101672799083094 1.192825850161534 1.2396805638049866 1.0730297965599205 1.1907731461374202 1.005569910961317 0.9043643037538862 0.9409224760054449 1.0 11.676005821293055 -8.515643434396972 23.159883810730996 0.9548454422156156 1.0801981899626851 0.16484727366303376 0.12257018593494975 177.13433997826428 567000.0255389919 0.021949423895870096 0.025414991907733307 3.0503984079664773e-09 8.515643434396972 0.1253527477470695 NAQPS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 NAQPSPAR 8 0 Q13794;Q13794-2 Q13794 PMAIP1 Phorbol-12-myristate-13-acetate-induced protein 1 1 NAQPS(1)PAR 45.161 0.052363 1217500.0 474.86 330.22 382.05 383.01 386.59 301.59 273.93 443.99 201.67 487.89 415.01 True False 555.0047587876462 347.0267875163404 436.2304348427954 476.847467193972 329.72312311267643 333.5040536207605 323.6995351926471 506.9269421623492 155.99206700081385 377.67531014567913 311.9515633066887 1.779137610033404 1.112438045951282 1.398391565083854 1.5285945745531313 1.0569689717775705 1.0690892204084994 1.0376596025403104 1.6250181175209386 0.5000522047310707 1.2106857428195528 1.0 8.285178229112123 -7.72345634320833 0.6478866023250185 0.7922386819303375 1.4341305827738091 0.10604016970544672 0.32047634343384845 0.5719860181395042 0.4861137157400642 0.07285897780167795 0.14667276292796044 1.8903562468202604e-08 7.72345634320833 0.6418919008434716 NART(ph)IT(ph)FQQFKEAVK ddPTM_A549_MK2206_60min_R1 1 NARTITFQQFKEAVK 15 2 H0YEZ3;H0Y8L2;D6RIC1;D6R9S2;P59282 H0YEZ3 TPPP2 Tubulin polymerization-promoting protein family member 2 2 NART(1)IT(1)FQQFKEAVK 41.092 0.04648 4489400.0 2543.4 2637.2 2662.5 2614.1 3343.7 2638.2 2769.1 2513.4 4259.6 4137.1 4224.7 True False 2972.6637398401613 2771.422215608059 3040.0825357124518 3254.554617351408 2851.8461593726074 2917.3725729045727 3272.2096261890238 2869.682146964678 3294.807401183451 3202.5262366592656 3175.590394211629 0.9360979757523652 0.8727266024798804 0.957328294371284 1.024865997605898 0.8980522691373759 0.9186866726333069 1.0304255964980589 0.9036688586145898 1.0375416827022552 1.0084821526405718 1.0 11.632809122096003 -8.771539892594408 24.99257882650833 1.0177280199003502 0.9442547398435018 0.3187782589262578 0.047199079242943906 169.05990363657594 418318.2844758464 0.008139051468073161 0.008712813714250521 1.6922327954036784e-09 8.771539892594408 -0.07347328005684839 NAS(ph)GEDEVLLGAR ddPTM_A549_MK2206_60min_R1 2 NASGEDEVLLGAR 13 0 O15438-2;O15438;O15438-4;O15438-5 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 NAS(1)GEDEVLLGAR;NAS(1)GEDEVLLGAR 147.35 1.4156e-12 45135000.0 1387.3600000000001 1826.17 2292.48 1672.65 2551.6 2246.0 1878.02 2615.3 2774.8 2279.1000000000004 2445.52 True False 1621.5124503045718 1919.1142527972725 2617.5881357634116 2082.4493250881105 2176.2630200840817 2483.6702292258624 2219.231924515371 2986.0267840203405 2146.3122304450753 1764.2497270963077 1838.2298910815969 0.8821053656953045 1.0440012221039905 1.4239721312676772 1.1328557625960578 1.1838905626779845 1.3511205759821991 1.207265715394061 1.6244033450372146 1.1675972852243228 0.959754672500859 1.0 10.84410148762388 -9.831525965086687 1.3138017800767996 1.0322808320237615 1.231139669201662 0.1892004342481295 0.18762148352275218 0.5071568717642543 1.7647421576136975 0.05247968541356068 0.034739777921291196 1.4739204173225608e-10 9.831525965086687 0.19885883717790054 NAS(ph)GEDEVLLGAR ddPTM_A549_PD325901_60min_R1 2 NASGEDEVLLGAR 13 0 O15438-2;O15438;O15438-4;O15438-5 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 NAS(1)GEDEVLLGAR;NAS(1)GEDEVLLGAR 126.71 7.0063e-07 60262000.0 1337.12 1353.4 1585.04 1143.67 1678.08 1268.95 1583.62 1584.72 1322.27 1326.19 1264.6599999999999 True False 1472.863438064282 1467.4557677577122 1692.6103460198187 1214.311898436977 1560.2174498617244 1258.6160919190315 1643.8855256901138 1553.1115164112098 1266.6995902177869 1242.4541370709985 1109.1148373402586 1.3279629741464103 1.3230873110279384 1.5260911575926859 1.0948477628781783 1.4067230888401456 1.134793305026275 1.4821598903430737 1.4003162378890257 1.1420815478904136 1.120221365039618 1.0 10.115193034006639 -9.00664427542999 2.4455284175005225 1.0536216450372828 1.3345914160778711 0.4293200154426484 0.12744874900859673 0.15830659988941764 1.9086154637036412 0.023196559224707536 0.02324063261646378 9.848174257500164e-10 9.00664427542999 0.2809697710405883 NAS(ph)GEDEVLLGARPR ddPTM_A549_MK2206_60min_R1 2 NASGEDEVLLGARPR 15 1 O15438-2;O15438;O15438-4;O15438-5 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 NAS(1)GEDEVLLGARPR;NAS(1)GEDEVLLGARPR 146.1 3.3408999999999997e-14 37409000.0 1227.96 1388.6100000000001 1249.35 968.6500000000001 1714.5700000000002 1509.4 1206.57 1249.8200000000002 1982.25 1815.45 1746.76 True False 1435.2096272604094 1459.2843177671416 1426.5266163351553 1205.9692934843515 1462.3590242771454 1669.1237061413692 1425.7881509049473 1426.9858124132234 1533.273540002794 1405.338584115216 1312.991283876513 1.09308389544145 1.1114196534943543 1.0864707434488348 0.9184899460442824 1.1137614104791578 1.2712374610845858 1.085908313645015 1.0868204762183566 1.1677713011741506 1.0703335211533576 1.0 10.358641623779507 NAS(ph)GEDEVLLGARPR ddPTM_A549_PD325901_60min_R1 2 NASGEDEVLLGARPR 15 1 O15438-2;O15438;O15438-4;O15438-5 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 NAS(1)GEDEVLLGARPR;NAS(1)GEDEVLLGARPR 154.56 6.0155e-20 56595000.0 3518.0 3763.6 3859.5 4058.2 4886.3 3578.3 3965.9 4731.3 4232.7 3987.3 4544.6 True False 3875.1447701852803 4080.771780355346 4121.428879058882 4308.865797159092 4543.103144819879 3549.1595111815827 4116.82449472375 4636.930509866954 4054.8143386107463 3735.5411975231254 3985.643010592996 0.9722759313581185 1.0238678600942228 1.0340687482810165 1.0810967730193193 1.1398670509991167 0.8904860525011066 1.0329135057460244 1.1634083879421648 1.0173551238367078 0.9372493190169936 1.0 11.960596780109599 -8.982642203560875 24.95649227610677 1.0076566116801775 1.0436567458116035 0.08792128664252263 0.07334220766823886 265.60597761859196 381886.6712078523 0.012364843618402356 0.012519308467839548 1.0407772640886897e-09 8.982642203560875 0.036000134131426 NAS(ph)NLER ddPTM_A549_MK2206_60min_R1 2 NASNLER 7 0 Q86V48-2;Q86V48-3;Q86V48;E5RFK8 Q86V48-2 LUZP1 Leucine zipper protein 1 1 NAS(1)NLER;NAS(1)NLER 110.47 0.0083839 133691000.0 7052.2 8753.5 8530.4 9142.9 13675.5 9374.5 9459.7 9442.400000000001 14124.1 12089.8 11471.7 True False 8242.438950263737 9199.015760778533 9740.13899066348 11382.91091044038 11663.852065825311 10366.503367710531 11178.40504165986 10780.88911613722 10925.013901553015 9358.70578326924 8622.960287186675 0.9558711481614527 1.0668048389887461 1.129558604733096 1.3200699680079548 1.3526505605223837 1.2021977398080659 1.2963535339795613 1.2502538289729952 1.2669679017062256 1.0853240037734895 1.0 13.073967520388567 -2.00727396083247 4.7968849837525065 1.1638910549339478 0.004159389025311766 0.0 0.12934410443484007 0.0 0.0 0.019770980951396608 0.0 0.009833905694599228 2.00727396083247 -1.159731665908636 NAS(ph)NLER ddPTM_A549_PD325901_60min_R1 2 NASNLER 7 0 Q86V48-2;Q86V48-3;Q86V48;E5RFK8 Q86V48-2 LUZP1 Leucine zipper protein 1 1 NAS(1)NLER;NAS(1)NLER 89.913 0.012596 214360000.0 8735.5 8887.900000000001 10258.0 9569.2 11559.6 10387.8 11411.3 11037.5 10799.0 11624.9 10982.3 True False 9622.321529264793 9636.914525087761 10954.169566365068 10160.267750769997 10747.69357445508 10303.205200864113 11845.563266002968 10817.348403748758 10345.155584534083 10890.90183008215 9631.546722535639 0.999042189843791 1.0005573146979148 1.1373219568913882 1.054894716649951 1.1158844870998663 1.069735266585682 1.2298713391782683 1.123116433463237 1.0740907854736104 1.1307531535511224 1.0 13.233551782600903 -10.061044375334607 0.9970028802870419 1.0085165272419117 1.0913603390419564 0.0 0.07181530412546361 0.5504391309102725 1.1002439755557687 0.02415438868897894 0.01219991633432537 8.688716451974612e-11 10.061044375334607 0.08284381180004474 NAS(ph)SPEK ddPTM_A549_PD325901_60min_R1 2 NASSPEK 7 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 NAS(0.5)S(0.5)PEK;NAS(0.5)S(0.5)PEK 95.09 0.011939 38246000.0 11966.8 11600.1 12978.8 13777.6 14880.099999999999 11247.0 9459.5 10488.8 11858.0 13044.7 14443.9 True False 13181.66072650745 12577.681137554488 13859.619415864598 14628.611060800136 13834.973109558205 11155.40816093097 9819.486448937014 10279.592655695575 11359.649497305783 12221.055415777577 12667.391867425998 1.0405978487492666 0.9929179794222518 1.0941178390087065 1.1548242301098606 1.0921721893781957 0.8806396989752033 0.7751782333494924 0.8115003280295913 0.8967630918971525 0.9647649290146167 1.0 13.628831893194265 -7.256374093695469 24.763711029122256 0.9193826869121298 1.0758750231824359 0.6063730263369294 0.07259014631006436 285.5128331652539 1395843.5073300025 0.013213753744693916 0.022443179903347057 5.541481737393029e-08 7.256374093695469 0.15649233627030612 NAS(ph)SPEKAK ddPTM_A549_PD325901_60min_R1 1 NASSPEKAK 9 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 NAS(0.5)S(0.5)PEKAK 103.43 0.00018161 172110000.0 9260.0 7172.1 6989.6 7579.2 7962.6 7166.9 5384.3 6728.0 6329.1 8966.3 12910.0 True False 10200.068383148298 7776.518037487143 7463.956287879248 8047.349970387898 7403.3344454787375 7108.535142578118 5589.202482902011 6593.804761986103 6063.109937038124 8400.166287801669 11322.151843232756 0.9008948585374144 0.6868409949947072 0.6592347807400631 0.7107615303002489 0.6538805121134025 0.6278431203717592 0.49365196300937036 0.5823808807092811 0.5355086224763927 0.7419231259314406 1.0 13.466860556670827 -10.850055726287565 1.0919028845720915 1.0003827071356872 0.6391400629187104 0.23868246263574866 0.12446442586294289 0.27326141516000274 0.5773538382814155 0.07502974183027762 0.018243916723484396 1.4123563071750451e-11 10.850055726287565 -0.3612426442169768 NAS(ph)VPNLR ddPTM_A549_MK2206_60min_R1 2 NASVPNLR 8 0 E9PPF9;E9PLD2;Q9H019-3;Q9H019;E9PNJ0;E9PPQ0;E9PRW1;E9PSD6;C9JF50;E9PLU1;E9PRK5;Q9H019-2 E9PPF9 MTFR1L Mitochondrial fission regulator 1-like 1 NAS(1)VPNLR;NAS(1)VPNLR 88.49600000000001 0.002684 158044000.0 1923.5 2302.8 2141.6000000000004 1789.65 2789.3 2058.75 1931.3899999999999 2126.0 2847.5 3164.6 3085.5 True False 2248.139774940062 2420.0026839459406 2445.3110829978546 2228.114330340441 2378.997664963368 2276.6055585123518 2282.298562682901 2427.367010601938 2202.5457965231208 2449.7146620898475 2319.2851945321518 0.9693244195410642 1.0434260907848834 1.0543382455779118 0.9606901021027292 1.0257460663190503 0.9815979353809442 0.9840525727769707 1.0466013478310452 0.9496657856980026 1.0562369250082702 1.0 11.179464518806835 -7.425830340886022 0.7049654619186113 0.9798573209713421 1.0167713080140026 0.0 0.0414334748131711 1.0686797941730402 1.0473814971063637 0.007178280510639411 0.01747752506792645 3.75119515769938e-08 7.425830340886022 0.03691398704266047 NAS(ph)VPNLR ddPTM_A549_PD325901_60min_R1 2 NASVPNLR 8 0 E9PPF9;E9PLD2;Q9H019-3;Q9H019;E9PNJ0;E9PPQ0;E9PRW1;E9PSD6;C9JF50;E9PLU1;E9PRK5;Q9H019-2 E9PPF9 MTFR1L Mitochondrial fission regulator 1-like 1 NAS(1)VPNLR;NAS(1)VPNLR 91.54899999999999 0.0026074 165968000.0 10246.3 11317.1 12091.9 11461.2 13230.7 12780.6 13020.0 12993.2 11719.6 13607.1 13211.7 True False 11286.49683307261 12270.83173436591 12912.529048501643 12169.132293726223 12301.42127543711 12676.519030994423 13515.48322481738 12734.040433031789 11227.065968006822 12747.94538379779 11586.744655866636 0.9740869561113523 1.0590404896989685 1.1144225088246622 1.0502632667894956 1.0616805358879309 1.0940535419994786 1.1664607813700443 1.099017956401089 0.968957744513883 1.1002180303803633 1.0 13.500187671646893 -8.762368927028062 24.999353390004657 0.9853411531728631 1.0800999783737202 0.0557027042407261 0.05703315338315873 16.103067934338164 433074.1580124735 0.008044187350021886 0.00880589014619378 1.7283475286149807e-09 8.762368927028062 0.0947588252008571 NASAS(ph)FQELEDK ddPTM_A549_MK2206_60min_R1 2 NASASFQELEDK 12 0 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 1 NAS(0.321)AS(0.679)FQELEDK;NAS(0.207)AS(0.793)FQELEDK 145.43 7.6011e-12 9078800.0 5482.7 5277.1 4279.3 4120.7 4799.1 3484.2 3385.7 3748.0 3996.3999999999996 4088.6 3950.5 True False 6408.04572085463 5545.681849683486 4886.169087351848 5130.271684985255 4093.1587473293275 3852.8957313752226 4000.8378647893473 4279.290477768606 3091.221780939419 3164.9824203439766 2969.4818217466445 2.157967654129443 1.8675587804816143 1.6454618619210173 1.7276656308903204 1.3784084204030378 1.2974976654711277 1.3473185238884746 1.4410899728126756 1.0409970380358036 1.0658366039372953 1.0 11.535995485580774 -2.0000000000000013 0.194230766936355 0.9073199115621191 6.708775325016094 0.9064454146444746 0.10704197074273429 9.091975735134273 0.09954374602500059 0.09393278143757536 16.109601747140395 0.009999999999999969 2.0000000000000013 5.801455413453975 up NASGLTNGLSSQERPKS(ph)AVFPGEGK ddPTM_A549_PD325901_60min_R1 2 NASGLTNGLSSQERPKSAVFPGEGK 25 2 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 NASGLTNGLSSQERPKS(1)AVFPGEGK;NASGLTNGLSSQERPKS(1)AVFPGEGK 168.88 2.2223e-48 53035000.0 6254.2 5802.700000000001 7246.6 7892.9 8551.3 8294.1 8791.3 9079.9 9287.9 8477.5 9796.099999999999 True False 6889.121779901304 6291.713893577421 7738.397853345789 8380.426506923508 7950.68618838349 8226.555599500096 9125.857732283943 8898.794271456247 8897.56186254229 7942.229203220801 8591.241802594299 0.8018772999522601 0.7323404506758862 0.9007310038705958 0.975461603745441 0.9254408583847121 0.9575513981012526 1.0622280156901422 1.0357983718685553 1.0356549224182576 0.9244564855365245 1.0 13.06865096235423 -6.034484200689651 0.8076604340624801 1.019030513293797 0.7203002301855248 0.7354910597618105 0.049674339220195325 0.3030891927775455 0.25971844532495386 0.006593882611607271 0.06371744470714899 9.236677901558733e-07 6.034484200689651 -0.2987302831082721 NASGVVNSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NASGVVNSSPR 11 0 A0A3B3ITD2;Q8N5G2 A0A3B3ITD2 TMEM57 Macoilin 1 NASGVVNS(0.167)S(0.833)PR;NASGVVNS(0.124)S(0.876)PR 109.96 6.172999999999999e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NASS(ph)PEKAK ddPTM_A549_MK2206_60min_R1 4 NASSPEKAK 9 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 NAS(0.029)S(0.971)PEKAK;NAS(0.018)S(0.982)PEKAK;NAS(0.086)S(0.914)PEKAK;NAS(0.029)S(0.971)PEKAK 94.309 0.00050541 150198200.0 24532.7 26001.6 22218.399999999998 15875.1 13306.2 9138.8 8413.59 7728.46 9809.5 40265.3 36581.5 True False 28673.219993071 27324.9703781869 25369.303215576932 19764.500212660318 11348.875606616553 10105.861750155518 9942.23039572703 8823.992872416111 7587.663912552605 31169.340764534656 27497.303951961727 1.042764775890888 0.9937327101567522 0.9226105679268611 0.71877956643274 0.41272684865553505 0.36752191297774633 0.3615710985010124 0.32090392890269465 0.27594210420804843 1.1335417035425743 1.0 14.747002552157271 -6.317980598960127 2.5961268194153413 0.5656285732425577 1.004588033791509 0.33946227151173336 0.26400870112205804 0.29763309991352566 3.905879237166683 0.0437951573498653 0.12272979912063707 4.808608292470533e-07 6.317980598960127 0.4389594605489513 NASS(ph)PEKAK ddPTM_A549_PD325901_60min_R1 3 NASSPEKAK 9 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 NAS(0.029)S(0.971)PEKAK;NAS(0.012)S(0.988)PEKAK;NAS(0.024)S(0.976)PEKAK 137.4 3.6331e-05 210254000.0 20649.7 17002.9 16367.2 17235.600000000002 17990.0 15354.0 11759.099999999999 15637.599999999999 16671.6 20402.1 25524.8 True False 22746.0423424943 18435.794054682738 17477.976615969044 18300.203867112315 16726.444462130778 15228.96211460248 12206.598985326422 15325.695800540114 15970.950629050703 19113.907924155832 22385.411415038536 1.0161100870906261 0.8235628871353938 0.7807753135252777 0.8175058089313572 0.7472029060361133 0.6803074481075497 0.5452925907417552 0.6846287305778218 0.7134535226063081 0.8538555566289523 1.0 14.450271212911813 -10.69325918675251 0.9961088181208227 0.9973297273709956 0.7500384082411407 0.2053299814001961 0.11774650077268348 0.4473299931596584 0.8019641505316658 0.07599827458078999 0.020818503400927547 2.0264729604091503e-11 10.69325918675251 -0.24729131912985491 NASVYS(ph)PSGPVNR ddPTM_A549_MK2206_60min_R1 2 NASVYSPSGPVNR 13 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 NASVYS(0.71)PS(0.29)GPVNR;NASVYS(0.563)PS(0.437)GPVNR 109.07 6.689e-05 16313700.0 4041.5 4575.700000000001 3605.0 3926.8 5160.5 4598.8 4368.5 4617.9 6841.2 5698.8 5893.5 True False 4723.606394811676 4808.58358560511 4116.243207978736 4888.866176280751 4401.397286073015 5085.4419635636195 5162.199903220087 5272.501466725625 5291.679123151527 4411.437122011508 4429.981297674683 1.0662813401246451 1.0854636312187496 0.9291784618005882 1.1035861886927012 0.9935475999375725 1.147960142909179 1.1652870647399232 1.1901859426569552 1.1945150030157357 0.9958139381597595 1.0 12.113084892740588 -7.2644658453627695 24.932676188535652 1.1118133853183858 1.0362444420497743 0.21283090826223783 0.0764268785435119 399.9761224106569 3295085.574191257 0.01329528547670242 0.02183340256066654 5.439189059743101e-08 7.2644658453627695 -0.07556894326861152 NASVYS(ph)PSGPVNR ddPTM_A549_PD325901_60min_R1 1 NASVYSPSGPVNR 13 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 NAS(0.001)VYS(0.993)PS(0.006)GPVNR 156.6 2.2172999999999997e-18 11883000.0 7999.0 9021.7 8959.2 9517.6 10529.0 9270.8 8463.6 9238.7 10636.0 10046.0 10339.0 True False 8811.052591447435 9781.99032065891 9567.2251880462 10105.48053596209 9789.479363078093 9195.301678523949 8785.686929459625 9054.426880880064 10189.00590768632 9411.69384553891 9067.36854432095 0.9717320464453768 1.0788124771641205 1.055126979926091 1.1144887832193968 1.0796384105518038 1.0141091799211277 0.9689345796981256 0.9985727211398072 1.1237004272940765 1.0379741155920719 1.0 13.146468209298668 -11.298394486425723 1.8646008738939008 0.9997876828772672 1.058798239899065 0.0 0.05283230752494486 0.6244298214214098 3.9193178092042094 0.04375937723944768 0.008624207862482193 5.030434674193173e-12 11.298394486425723 0.059010557021797805 NASVYSPS(ph)GPVNR ddPTM_A549_PD325901_60min_R1 1 NASVYSPSGPVNR 13 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 NAS(0.001)VYS(0.239)PS(0.761)GPVNR 127.36 5.5892e-08 11771000.0 6675.8 6425.9 7521.5 6819.0 8175.2 7848.1 7959.0 8087.7 8709.5 7881.7 8939.6 True False 7353.522301535782 6967.4331446980095 8031.954220453783 7240.194142927371 7601.002154908925 7784.187675629266 8261.884100331914 7926.3844788220895 8343.470003102108 7384.048116900664 7840.0858727934565 0.9379389997568599 0.8886934732279256 1.024472735474256 0.9234840358129469 0.9695049618379569 0.9928702060065225 1.0538002050465003 1.0110073546934104 1.0642064562144002 0.9418325560086878 1.0 12.93665374098915 -7.345302129546341 2.0824726990653097 1.0309009853292708 0.9456528962276751 0.30588097517025303 0.04411325990135264 0.19528816770350302 1.6543219431813032 0.005764491442959827 0.010175578786204233 4.5154170700495536e-08 7.345302129546341 -0.08524808910159565 NAT(ph)SPQVQRPSFMDYFDKQDFK ddPTM_A549_MK2206_60min_R1 1 NATSPQVQRPSFMDYFDKQDFK 22 2 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.5)S(0.5)PQVQRPSFMDYFDKQDFK 107.23 1.5071000000000002e-10 9816400.0 2427.2 2425.9 3505.8 2788.9 4141.8 3171.6 3106.1 2959.5 4322.8 3573.2 3252.6 True False 2836.852020657405 2549.3679481433296 4002.975156319518 3472.1806251984785 3532.546706609284 3507.2166068623064 3670.4381639903677 3379.018188088632 3343.692702093116 2766.011638304823 2444.889652806767 1.1603190423750454 1.0427333377670522 1.6372825463611609 1.4201788703274878 1.4448695885124596 1.4345091619312853 1.5012694580210006 1.3820739043209875 1.3676252006934182 1.1313441631729282 1.0 11.255553636980295 -10.469949316551839 0.7494380293714197 0.9931322905295642 1.384745908399979 0.3625347558317864 0.15577991412301406 0.5109999963833439 0.5059555393359804 0.1146347073438757 0.031194682147392096 3.388837025601061e-11 10.469949316551839 0.3916136178704147 NAT(ph)SPQVQRPSFMDYFDKQDFK ddPTM_A549_PD325901_60min_R1 3 NATSPQVQRPSFMDYFDKQDFK 22 2 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.5)S(0.5)PQVQRPS(0.001)FMDYFDKQDFK;NAT(0.5)S(0.5)PQVQRPSFMDYFDKQDFK;NAT(0.486)S(0.486)PQVQRPS(0.027)FMDY(0.002)FDKQDFK 130.9 3.237e-22 50314000.0 10130.1 10254.3 11363.400000000001 11548.3 14404.8 14510.4 13728.5 15357.599999999999 14729.199999999999 13637.2 14107.099999999999 True False 11158.500294614529 11118.465848468984 12134.58865767526 12261.612262907776 13393.056541862217 14392.232113307795 14250.945580023446 15051.280620195863 14110.182946172743 12776.144864660893 12372.016132274883 0.9019144636827093 0.8986785766843803 0.9808093141763495 0.9910763235202147 1.082528215181012 1.1632891486265342 1.151869301467123 1.216558437951886 1.140491799825859 1.0326647434068372 1.0 13.594792999267554 -6.361496315515607 1.507417309875546 1.0942773166202666 0.9048898966024909 0.6461508078347489 0.06110676371644707 0.2771894621419335 1.1885398964343807 0.01174570269843872 0.04167162582901303 4.3501445120753814e-07 6.361496315515607 -0.18938742001777575 NATDLQNS(ph)SMSEEELTK ddPTM_A549_MK2206_60min_R1 2 NATDLQNSSMSEEELTK 17 0 Q5QNY5;P40855;H0YJ60;P40855-5 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.824)S(0.176)MSEEELTK;NATDLQNS(0.461)S(0.461)MS(0.078)EEELTK 151.44 2.6176e-17 27812900.0 2490.23 4079.7599999999998 5014.0 3519.8700000000003 5181.5 4309.2 3688.1000000000004 4160.39 5513.299999999999 4409.700000000001 4811.9 True False 2910.5199437218566 4287.402357936117 5725.060594952952 4382.2383080129675 4419.308213891543 4765.196683784542 4358.180030460342 4750.138023160014 4264.546352930961 3413.54570733034 3616.972428316078 0.8046840282597569 1.1853566602751697 1.5828322466970857 1.2115763652788383 1.2218252423751546 1.3174545225944763 1.204924869302734 1.3132911896072965 1.1790375617865487 0.9437577352281765 1.0 11.82056688523159 -9.976908331630124 0.7509946183716225 1.01126301585246 1.241240747169179 0.22728672543859818 0.1740781295071558 0.7203396000574395 0.8229270871903688 0.08123696195600297 0.0359658602357173 1.0546094737744232e-10 9.976908331630124 0.22997773131671906 NATDLQNS(ph)SMSEEELTK ddPTM_A549_PD325901_60min_R1 1 NATDLQNSSMSEEELTK 17 0 Q5QNY5;P40855;H0YJ60;P40855-5 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.435)S(0.435)MS(0.13)EEELTK 123.02 1.9431999999999998e-10 41729000.0 2792.4 3793.3 4180.2 4140.9 4523.1 4042.7 4737.0 4744.4 3977.7 3883.6 4122.6 True False 3075.882392343767 4112.97470358751 4463.893509584645 4396.673988333764 4205.413059847903 4009.7775915529132 4917.269127185863 4649.769220090201 3810.531101824358 3638.3888332206784 3615.546335314591 0.8507379264650283 1.137580415832131 1.2346387227799802 1.2160469208732203 1.1631473281843552 1.1090378105205558 1.3600348802494349 1.2860488537164942 1.053929544369344 1.006317855114447 1.0 11.819997950011373 -8.92713593115939 7.816293518584846 1.0236021593328302 1.1764558061817725 0.23126503166711432 0.1220558116459351 0.2568187094246122 23.85245397511943 0.021346089401933097 0.022627132139492898 1.1826713298690972e-09 8.92713593115939 0.15285364684894232 NATDLQNSS(ph)MSEEELTK ddPTM_A549_MK2206_60min_R1 4 NATDLQNSSMSEEELTK 17 0 Q5QNY5;P40855;H0YJ60;P40855-5 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.07)S(0.464)MS(0.464)EEELT(0.002)K;NATDLQNS(0.082)S(0.783)MS(0.135)EEELTK;NATDLQNS(0.025)S(0.942)MS(0.033)EEELTK;NATDLQNS(0.026)S(0.972)MS(0.002)EEELTK 229.16 8.246199999999999e-64 53736400.0 4859.58 6054.049999999999 6980.0 5761.64 8607.2 6990.35 6923.549999999999 6158.48 9056.15 7685.9 7649.099999999999 True False 5679.758298675971 6362.1752860617225 7969.868957473397 7173.242058649848 7341.092281888897 7730.064197181216 8181.469415117191 7031.463399554004 7004.946484699861 5949.649851910624 5749.617365579609 0.9878497885229974 1.1065389019014071 1.386156408456925 1.2476033799384363 1.2767966657810548 1.3444484572934638 1.4229589370757076 1.222944580912155 1.218332636643848 1.0347905736351293 1.0 12.48925023321495 -10.218107692130799 0.7689588841825604 1.0074080207425478 1.2555699383566277 0.3594471648525279 0.11700091562290428 0.5140146407547778 0.5839161275923477 0.06801889635939974 0.02468248462046389 6.051907868080644e-11 10.218107692130799 0.2481619176140799 NATDLQNSS(ph)MSEEELTK ddPTM_A549_PD325901_60min_R1 3 NATDLQNSSMSEEELTK 17 0 Q5QNY5;P40855;H0YJ60;P40855-5 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.027)S(0.959)MS(0.014)EEELTK;NATDLQNS(0.017)S(0.981)MS(0.002)EEELTK;NATDLQNS(0.108)S(0.885)MS(0.006)EEELTK 223.06 1.7388999999999997e-63 73393000.0 8307.400000000001 8101.700000000001 9843.2 9840.0 11541.1 9280.3 10907.1 11266.2 11204.1 9616.6 9984.1 True False 9150.761132415355 8784.45869191862 10511.218743970048 10447.794451738564 10730.492950633545 9204.724313673658 11322.175659094142 11041.486802837073 10733.230640307287 9009.406234820783 8756.118994424494 1.0450704402535131 1.003236559200734 1.200442656234243 1.1931992311195465 1.22548505307731 1.0512333511610354 1.2930586788854284 1.2610023698704642 1.2257977132496405 1.0289268842232009 1.0 13.09607584533668 -2.023704463545873 22.38352386228039 1.1339735957752903 0.0008865711486738537 0.0 0.10745055023748167 0.0 0.0 0.01574868737931571 0.0 0.009468812928444582 2.023704463545873 -1.1330870246266165 NATS(ph)PQVQR ddPTM_A549_MK2206_60min_R1 2 NATSPQVQR 9 0 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.079)S(0.921)PQVQR;NAT(0.498)S(0.502)PQVQR 55.806000000000004 0.0169 9701900.0 2041.65 1991.8899999999999 1895.1 1588.3400000000001 1772.99 1347.09 1833.6100000000001 1378.67 1765.26 2963.0 3705.6 True False 2386.2306064498966 2093.2686929499223 2163.853676405133 1977.4833713032929 1512.18551966565 1489.6381696740284 2166.753202367721 1574.1006944997998 1365.4314285409666 2293.6562421071276 2785.3972506427945 0.8566931003824388 0.7515153152631469 0.7768563984565483 0.7099466228190406 0.54289761337155 0.5348027716083442 0.7778973724009 0.5651261033364414 0.4902106614149425 0.8234574948251326 1.0 11.44366738266262 -10.978698726760589 1.2635335490122457 0.9990430047947702 0.6493896486864225 0.32889750794759187 0.12525969133332518 0.30125857832661174 0.8593774806601473 0.08974305613024341 0.020900193154783083 1.0502707564591762e-11 10.978698726760589 -0.3496533561083477 NATS(ph)PQVQRPSFMDYFDKQDFK ddPTM_A549_MK2206_60min_R1 1 NATSPQVQRPSFMDYFDKQDFK 22 2 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.465)S(0.534)PQVQRPSFMDYFDKQDFK 120.57 7.5429999999999995e-16 8824000.0 2097.8 3074.9 3698.2 2401.4 4181.8 3136.3 3738.5 2793.5 4073.5 3702.5 4106.6 True False 2451.857353714199 3231.399276040202 4222.660369416635 2989.743107802942 3566.6627595969608 3468.1811842925504 4417.737058072175 3189.487179734955 3150.8587540428207 2866.102678502074 3086.8178836058146 0.7942993225276066 1.0468383292717927 1.3679654999549262 0.96855182927427 1.1554496876993026 1.1235457727234794 1.4311621950666134 1.0332605615233799 1.020746565833096 0.9284974969608781 1.0 11.59190465385771 -8.496642613803232 24.99307744019244 1.0107025650007502 1.135364697906576 0.12472973695161937 0.16544829669639616 1220.2403045421763 1162427.5929176765 0.025926370288496692 0.03128797493789708 3.1868189149284677e-09 8.496642613803232 0.12466213290582573 NAVALSAS(ph)PQLK ddPTM_A549_MK2206_60min_R1 2 NAVALSASPQLK 12 0 A0A2R8YD63;Q92547 A0A2R8YD63 TOPBP1 DNA topoisomerase 2-binding protein 1 1 NAVALS(0.005)AS(0.995)PQLK;NAVALS(0.079)AS(0.921)PQLK 125.47 3.7980000000000003e-06 16342200.0 8824.900000000001 10607.1 10175.0 9654.3 13311.5 10975.099999999999 10089.400000000001 10886.8 15937.599999999999 13949.7 14920.599999999999 True False 10314.32737190983 11146.9560834128 11617.968000328334 12019.603933398 11353.395983637418 12136.477797318235 11922.51338069103 12430.037239426703 12327.75904711743 10798.453081512587 11215.403232389053 0.919657292581599 0.9938970407431644 1.0358939183547775 1.071705018923126 1.0123038600029872 1.082125853689255 1.0630481253014523 1.1083005204422698 1.099181080847454 0.962823436461709 1.0 13.453193870763656 -5.323755500964739 1.419225244668972 1.055023095947778 0.8737086230965679 0.45905028129631653 0.0418840740409641 0.7052346950107131 1.3645503623621236 0.006023660820224664 0.1748299014192495 4.745090491030329e-06 5.323755500964739 -0.18131447285121005 NAVALSAS(ph)PQLK ddPTM_A549_PD325901_60min_R1 4 NAVALSASPQLK 12 0 A0A2R8YD63;Q92547 A0A2R8YD63 TOPBP1 DNA topoisomerase 2-binding protein 1 1 NAVALS(0.001)AS(0.999)PQLK;NAVALS(0.051)AS(0.949)PQLK;NAVALS(0.012)AS(0.988)PQLK;NAVALS(0.037)AS(0.963)PQLK 151.74 2.0874e-12 25962400.0 22330.1 20902.0 25576.6 24319.0 26297.3 26699.799999999996 27728.100000000002 27851.6 26449.6 27294.699999999997 27774.0 True False 24597.035313449207 22663.484895575377 27312.38188059008 25821.129397543715 24450.26836875996 26482.365681090487 28783.308018898508 27296.077988842473 25338.01529296165 25571.307983857358 24357.974073892085 1.009814496018097 0.930433903362557 1.1212911959646372 1.0600688431317407 1.0037890792800703 1.0872154474240703 1.1816790645881212 1.1206218508172063 1.0402349233190133 1.049812595509155 1.0 14.572106524489323 -3.932062155687248 14.39262249924877 1.040794799692816 0.5641049577295076 0.0 0.06841142187204878 0.0 0.0 0.009475185559907852 0.0 0.00011693320256953356 3.932062155687248 -0.4766898419633083 NAVASVQNGPGGGPSSSSIGSAS(ph)KSDESSTEETDKSR ddPTM_A549_MK2206_60min_R1 2 NAVASVQNGPGGGPSSSSIGSASKSDESSTEETDKSR 37 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y815 A0A0C4DG98 THOC2 THO complex subunit 2 1 NAVASVQNGPGGGPSSS(0.002)S(0.007)IGS(0.109)AS(0.439)KS(0.439)DES(0.001)S(0.002)T(0.001)EETDKSR;NAVASVQNGPGGGPSSSS(0.002)IGS(0.013)AS(0.485)KS(0.485)DES(0.002)S(0.005)T(0.005)EET(0.001)DKSR 171.08 8.662699999999998e-66 33843000.0 859.03 1695.47 1873.29 1354.64 2414.5 1626.44 1580.27 1462.65 2375.0 2115.09 1972.17 True False 1004.0132627329142 1781.7621810621088 2138.9506904506206 1686.526860812101 2059.330248468808 1798.548801256505 1867.3846036537957 1669.9851166777632 1837.0662920956659 1637.2897000061982 1482.4257598769968 0.6772772640002029 1.201923380776889 1.4428720468457716 1.1376804872522177 1.3891624823354927 1.2132471317860385 1.2596817015704993 1.1265219222960137 1.2392298770146135 1.104466573855308 1.0 10.533744140840323 -10.797161064742841 0.867831376162178 0.9900158399552925 1.2035620146024772 0.05623902308403961 0.18905071769299908 1.0807229891361678 1.3307496560542558 0.15641042021504126 0.03246600288884075 1.595287400812415e-11 10.797161064742841 0.21354617464718473 NAVEEYVYEFR ddPTM_A549_MK2206_60min_R1 1 NAVEEYVYEFR 11 0 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4 A0A0A0MSM0 HSPH1 Heat shock protein 105 kDa 0 74.84100000000001 0.0038021 902390.0 657.27 887.7 812.36 954.35 1326.0 841.79 941.23 947.03 1387.7 1290.6 1198.0 False True 768.2011072913199 932.8801383267386 927.564863365772 1188.1657928423988 1130.9471565415786 930.8676590650209 1112.2393075215386 1081.2744026577382 1073.3881657015397 999.0525636393718 900.5035368820348 0.8530795003328827 1.035953885930095 1.0300513272578986 1.3194460034620024 1.2559052910080148 1.0337190482206442 1.2351304153369926 1.2007442040723313 1.1919866183070336 1.109437689826916 1.0 9.814588132349531 -5.368562446467623 1.7368217873092138 1.1295753912216149 0.8011748669483241 0.4456661653566816 0.09818338608686855 0.6603601266237937 2.2978219520659944 0.016379678275429792 0.3321386618657874 4.279938746476067e-06 5.368562446467623 -0.3284005242732908 NAVTSMS(ph)IR ddPTM_A549_MK2206_60min_R1 1 NAVTSMSIR 9 0 H7C0W7;Q9BYI3-3;Q9BYI3 H7C0W7 FAM126A Hyccin 1 NAVT(0.033)S(0.16)MS(0.807)IR 60.255 0.013930000000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NCES(ph)DTEEDIAR ddPTM_A549_MK2206_60min_R1 1 NCESDTEEDIAR 12 0 Q9UIK4 Q9UIK4 DAPK2 Death-associated protein kinase 2 1 NCES(0.92)DT(0.08)EEDIAR 168.93 1.34e-15 9326500.0 991.48 1746.4 1537.9 1458.3 2190.3 2222.0 1421.9 1976.8 2149.2 1884.5 2192.6 True False 1158.817584641316 1835.2843005224906 1755.9973452289878 1815.583565465575 1868.1097714728655 2457.1305651557727 1680.24082462828 2257.0174536961013 1662.4096315671595 1458.7901411579082 1648.1169073184888 0.7031161318081068 1.1135643911987567 1.0654567873379943 1.101610909640844 1.1334813466068427 1.4908715238857426 1.0194912855800122 1.3694522783388607 1.0086721543752168 0.8851254026216999 1.0 10.68660286676245 -4.177587095784853 14.069331911156313 1.065313968385481 1.0769414190315674 0.0 0.2034075281513632 0.0 0.0 0.025049913352974167 0.0 6.643744222754415e-05 4.177587095784853 0.01162745064608628 NCES(ph)DTEEDIARR ddPTM_A549_MK2206_60min_R1 1 NCESDTEEDIARR 13 1 Q9UIK4 Q9UIK4 DAPK2 Death-associated protein kinase 2 1 NCES(0.976)DT(0.024)EEDIARR 51.888000000000005 0.010551000000000001 1664100.0 181.74 221.43 222.43 291.31 346.39 204.42 108.48 137.96 273.66 198.01 164.08 True False 212.4132688836012 232.69984119600048 253.9739186548435 362.6809630774026 295.4364898600584 226.051588716986 128.18941181213583 157.5162524847804 211.67644694522107 153.27940347608245 123.33440762237423 1.722254746088123 1.8867390348075597 2.0592300522694513 2.9406308431614687 2.395410133761107 1.8328347545083417 1.0393645559528422 1.2771476793974985 1.7162805661931166 1.2427951488233027 1.0 6.946431526265873 -7.548526888277671 4.773667530373696 1.3221799917134167 2.2107803053164967 0.6332110004549774 0.34181130245720465 0.11891440571189166 6.828452728503894 0.062291414160037785 0.09499845111318947 2.827959019480675e-08 7.548526888277671 0.88860031360308 NCPAVTLTS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 NCPAVTLTSPAK 12 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 NCPAVT(0.002)LT(0.2)S(0.798)PAK 80.469 0.00081613 3587900.0 2206.7 2496.4 2650.3 2228.6 3181.1 2723.9 2500.5 2330.2 3709.4 4239.2 3333.9 True False 2579.1370113648227 2623.4560970134817 3026.152392262429 2774.6071000456573 2713.164403977689 3012.1412900215164 2954.80848300374 2660.51298593821 2869.226822694595 3281.5617757477326 2506.000619040914 1.0291845068864744 1.046869692321752 1.207562507873835 1.1071853210904405 1.0826670924830257 1.2019714868124456 1.1790932773730087 1.0616569548001271 1.1449425833712257 1.3094816301376806 1.0 11.291171055701408 -10.809671611654993 0.8948428135328581 0.9947209671285264 1.1213778611767036 0.0 0.10874735178612441 0.5702611171425406 0.7533093497159519 0.04986055196741699 0.010488248616535334 1.549988187255754e-11 10.809671611654993 0.12665689404817715 NCPS(ph)PVLIDCPHPNCNKK ddPTM_A549_PD325901_60min_R1 1 NCPSPVLIDCPHPNCNKK 18 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 NCPS(1)PVLIDCPHPNCNKK 97.45700000000001 3.6463999999999996e-07 5926000.0 1968.3 2083.3 2552.8 1610.2 1621.8 1936.8 1927.4 1852.3 1707.7 1500.8 1686.7 True False 2168.1203670141235 2258.867002341985 2726.0483592334535 1709.6583969704725 1507.8903629062643 1921.0273429439928 2000.7482617137493 1815.3544233987611 1635.9313076867165 1406.0392318718696 1479.2465928722452 1.465692317603582 1.5270388407357796 1.842862692649709 1.1557629439259602 1.0193637559633661 1.2986525385290524 1.3525454588534203 1.2272155515828482 1.1059219710692303 0.9505103737584216 1.0 10.530646856814759 -4.96061409832798 0.20762629446639544 0.9679277925166809 2.232245565750518 0.5276434201427616 0.1757995217050756 8.599161083233582 0.28140653763176815 0.16590305995548335 2.8794872328592653 1.0949288566524764e-05 4.96061409832798 1.2643177732338369 NCS(ph)ASTSQGR ddPTM_A549_MK2206_60min_R1 1 NCSASTSQGR 10 0 Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2;A0A0C4DH18;A0A0A0MTG7;Q66PJ3-6;Q66PJ3-5 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.976)AS(0.003)T(0.02)S(0.001)QGR 69.86399999999999 0.0033961 8978800.0 260.12 434.16 251.38 303.38 653.65 652.81 512.91 412.17 680.61 819.04 680.35 True False 304.02189667658365 456.2568895527056 287.029463972731 377.7081136192455 557.4989508849193 721.889920899793 606.0991077854221 470.596359717686 526.4529217108342 634.0182951520155 511.4003182952359 0.5944890642423675 0.8921716964777181 0.5612618015756227 0.7385762192685835 1.0901419708602338 1.4115945866170534 1.1851754605978086 0.9202113156410017 1.029434090822971 1.239769066365718 1.0 8.99830924828705 -6.724938013499161 6.255381558922529 1.0552334607705998 0.6977602227729407 0.6171223862547097 0.15643930546181756 0.1099360760713676 11.68575616041014 0.022009951288601122 0.04556072206274481 1.8839179603912674e-07 6.724938013499161 -0.35747323799765907 NCS(ph)ASTSQGR ddPTM_A549_PD325901_60min_R1 1 NCSASTSQGR 10 0 Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2;A0A0C4DH18;A0A0A0MTG7;Q66PJ3-6;Q66PJ3-5 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.885)AS(0.033)T(0.078)S(0.004)QGR 123.95 2.5121e-05 11038000.0 702.53 762.04 755.69 810.03 737.41 526.28 473.77 670.55 696.49 902.18 756.94 True False 773.8503284247485 826.2597851796121 806.9756677331275 860.0637133883931 685.6168655263957 521.9941501675781 491.7995766068917 657.175354213701 667.2189474092181 845.2162008329977 663.8411786380022 1.165716067828831 1.2446648562459515 1.2156155624283405 1.2955865665835602 1.0328025551730167 0.7863238481809 0.7408392134032918 0.9899587060296899 1.0050882182062673 1.2732205051924035 1.0 9.374694313578143 -6.8871324440428285 5.257903094196092 0.9641500573240077 1.2290089250907106 0.4698175776820548 0.13149534862537926 0.11430828619928905 4.856625750388259 0.015306613107447551 0.029390022456594205 1.2967837387361288e-07 6.8871324440428285 0.26485886776670287 NCS(ph)SPQR ddPTM_A549_PD325901_60min_R1 1 NCSSPQR 7 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form 1 NCS(0.5)S(0.5)PQR 52.937 0.046113999999999995 4188400.0 1109.8 771.99 780.82 796.94 882.54 713.32 571.25 752.35 580.55 1027.9 1269.7 True False 1222.466079008421 837.048306599141 833.8111406520935 846.165173817941 820.5534349977155 707.510958420492 592.9892313499944 737.3437890428424 556.1515024170075 962.9982185774892 1113.5349492914513 1.0978246168081955 0.7517036686919972 0.748796561062275 0.7598909889234826 0.7368905982877667 0.6353738235793006 0.5325286213309397 0.6621649275687472 0.49944683170554266 0.8648118491388622 1.0 10.120931123774044 -5.254825249421232 4.000263362454663 0.7262060632857346 1.1336403100613242 0.3981566142208107 0.1339052825070527 0.2765712359124843 9.077240323505068 0.025551723425062164 0.32786519903008143 5.561279859655509e-06 5.254825249421232 0.4074342467755896 NCSASTS(ph)QER ddPTM_A549_MK2206_60min_R1 2 NCSASTSQER 10 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F8WEP2 H7BZV4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCSAS(0.001)T(0.003)S(0.997)QER;NCSAS(0.002)T(0.006)S(0.992)QER 144.28 4.3523e-08 100947000.0 4335.2 5573.9 5490.7 5662.3 7320.099999999999 6753.2 6049.7 6706.5 8073.2 7146.5 7109.4 True False 5066.875774536081 5857.587701948184 6269.363823037131 7049.563754190308 6243.32298687783 7467.819141588646 7148.852181414801 7657.166912794865 6244.633090251254 5532.100686540194 5343.939770541851 0.9481536080303394 1.0961178369258175 1.1731726202448283 1.319169761802071 1.168299654366199 1.397436996343887 1.3377493924655404 1.4328692390966942 1.168544811203603 1.0352101490805656 1.0 12.383688032513302 -9.831882260349692 1.1383137999264172 1.0289553914757728 1.2340792526655708 0.2604183867872526 0.13450770888219735 0.4207292468286895 1.1080501400369016 0.043273404771213074 0.02719632207544743 1.472711708654633e-10 9.831882260349692 0.20512386118979808 NCSASTS(ph)QER ddPTM_A549_PD325901_60min_R1 2 NCSASTSQER 10 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F8WEP2 H7BZV4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCSAST(0.002)S(0.998)QER;NCSAS(0.001)T(0.005)S(0.994)QER 145.29 4.0864e-08 161574000.0 3671.6000000000004 3389.8 5237.4 3820.3999999999996 3868.6000000000004 3970.7 4361.9 4557.7 3293.5 3721.9 4525.4 True False 4044.3381291109395 3675.4703425041353 5592.841459044693 4056.3774312420746 3596.8828819454757 3938.3639356813883 4527.894491423267 4466.7930980535175 3155.085648454764 3486.8985988165705 3968.8044888741683 1.0190318370301474 0.926090048730709 1.4092005476014806 1.0220653203284267 0.9062887557269933 0.9923300446574996 1.1408711374209557 1.1254757221161613 0.7949712960916772 0.878576560924446 1.0 11.954488778751143 -8.750488964814929 24.998910414770496 0.9031808857082605 1.0673635405770703 0.24938482308165222 0.13592872930540573 247.47630649305881 564967.9215391421 0.02471625491238896 0.027892695518385496 1.7762784019769597e-09 8.750488964814929 0.16418265486880979 NCSS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 NCSSPQR 7 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form 1 NCS(0.191)S(0.809)PQR 55.37 0.0402 5572300.0 956.16 746.04 1008.4 722.44 663.6 704.9 440.25 746.29 448.49 816.03 1179.8 True False 1053.2286593122108 808.911409027608 1076.8360880018076 767.063478019717 616.9910252957188 699.1595281088499 457.00395466404376 731.4046604968206 429.6415249659868 764.5057265354486 1034.6920793683973 1.0179150689499128 0.7817895054549836 1.0407309667037714 0.7413446892218912 0.5963039996134367 0.6757174835392912 0.4416811182540517 0.7068814723538706 0.4152361205164062 0.7388726963118559 1.0 10.014985775417513 -6.424111558756377 5.715335000832691 0.6833236243389854 0.9285132831038353 0.3786095671864049 0.16073388540362832 0.29920158161063376 14.146365849786406 0.031770642786618175 0.07457412409547422 3.7660704617666493e-07 6.424111558756377 0.24518965876484988 NDAPTPGTS(ph)TTPGLR ddPTM_A549_MK2206_60min_R1 1 NDAPTPGTSTTPGLR 15 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 NDAPT(0.054)PGT(0.103)S(0.322)T(0.322)T(0.198)PGLR 70.45100000000001 0.0018662 7021000.0 2072.3 2721.1 2897.2 2996.8 3705.5 3383.7 3269.2 2842.6 4662.8 4144.9 5102.4 True False 2422.053577129344 2859.592367242184 3308.0665248699042 3731.0161345314636 3160.4258586461697 3741.760888081722 3863.171322789773 3245.547255097398 3606.683244961544 3208.56421124193 3835.3332609239505 0.6315105917408229 0.745591627297935 0.8625238798865095 0.9728010268480929 0.8240290070346605 0.9756025444266905 1.0072583162849102 0.8462230096571921 0.9403832730021162 0.8365802898882824 1.0 11.905136226925643 -4.524616286773232 0.57480277718153 0.9642836088937128 6.38443091616987e-17 0.628256058788728 0.06832634042026305 2.490671454665062 0.3031862831712344 0.009936231632534251 1.942514979880832 2.988021466638646e-05 4.524616286773232 -0.9642836088937127 NDAPTPGTSTT(ph)PGLR ddPTM_A549_MK2206_60min_R1 1 NDAPTPGTSTTPGLR 15 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 NDAPT(0.004)PGT(0.062)S(0.259)T(0.131)T(0.543)PGLR 59.728 0.0064827 6433600.0 2350.4 3007.8 2437.6 2894.1 3721.6 2363.0 2599.4 3156.0 4726.5 3925.5 3557.8 True False 2747.09005823713 3160.8841726474748 2783.288333916498 3603.1546299210872 3174.15756997371 2613.051091567549 3071.6773328214013 3603.372664844643 3655.955296669543 3038.7268236218474 2674.300069715278 1.0272183325073172 1.1819482071000362 1.0407539398571768 1.3473262296645345 1.1869115234744956 0.9770971930781688 1.1485911276771685 1.3474077593799263 1.367069962743103 1.1362699564022254 1.0 11.384945636705908 -8.017748575005843 24.496308278987016 1.1939400307317345 1.1319331024764363 0.07896187797898402 0.13129986789481635 2019.449705402985 2787209.899488872 0.026762357296149154 0.034938969750962466 9.599562156768204e-09 8.017748575005843 -0.06200692825529819 NDEELNK ddPTM_A549_MK2206_60min_R1 2 NDEELNK 7 0 P16104;A0A0U1RR32;A0A0U1RRH7;P20671;A0A3B3IS11;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;H0YFX9;Q8IUE6;Q93077 P16104;A0A0U1RR32;Q99878;Q93077 H2AFX;HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST2H2AB;HIST1H2AC Histone H2AX;Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A;Histone H2A type 2-B;Histone H2A type 1-C 0 ; 128.61 0.015938 132595000.0 28748.0 36176.0 35640.0 30145.0 22639.0 20865.6 20946.2 24397.0 19050.9 42393.0 38408.0 False True 33599.95957888063 38017.203879810855 40694.28791466359 37530.52635326049 19308.83308970196 23073.58394253567 24751.853407995557 27855.349462678958 14735.901568035935 32816.39185678281 28870.233593126206 1.16382707713458 1.3168304910723851 1.4095586647540186 1.2999730754584624 0.668814577735154 0.7992170852413651 0.8573485672761856 0.9648466948778384 0.5104185084094521 1.1366860524674158 1.0 14.81729516021934 -6.753221471523006 24.704536526657044 0.7823005033142026 1.306925672551742 0.5940847347345437 0.17325226512104538 76.98572477092515 231430.85311368215 0.02682708610440797 0.055092652703711456 1.7651374468843425e-07 6.753221471523006 0.5246251692375393 NDEELNK ddPTM_A549_PD325901_60min_R1 2 NDEELNK 7 0 P16104;A0A0U1RR32;A0A0U1RRH7;P20671;A0A3B3IS11;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;Q96QV6;H0YFX9;Q8IUE6;Q93077 P16104;A0A0U1RR32;Q99878;Q93077 H2AFX;HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC;HIST1H2AA;HIST2H2AB;HIST1H2AC Histone H2AX;Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-A;Histone H2A;Histone H2A type 2-B;Histone H2A type 1-C 0 ; 117.04 0.019545 234150000.0 34950.0 33972.0 35881.0 37541.0 46045.0 34234.0 38686.0 35821.0 41182.0 37738.0 39864.0 False True 38498.09827116986 36834.93966474437 38316.100429980994 39859.822308203016 42810.95804662653 33955.20965424652 40158.2168997915 35106.522053969136 39451.26375426269 35355.21623959264 34960.980718716564 1.1011732931896754 1.05360144102092 1.095967551318383 1.1401231169371582 1.22453538678071 0.9712316118199854 1.1486581919108627 1.0041629648900168 1.128436987270847 1.0112764434169612 1.0 15.093458035159808 -7.272285861571018 24.988709483235283 1.0591009459764114 1.1186608083475222 0.2529474297549411 0.0647167791684014 1064.74374819105 2453007.721521948 0.010322860736056793 0.016600451220542416 5.342126139035842e-08 7.272285861571018 0.05955986237111088 NDEELNKLLGK ddPTM_A549_MK2206_60min_R1 2 NDEELNKLLGK 11 1 A0A0U1RR32;A0A0U1RRH7;P20671;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;H0YFX9 A0A0U1RR32;Q99878 HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A 0 ; 158.2 2.9231999999999996e-13 43895000.0 5302.9 8045.6 9598.4 9499.6 12912.0 7176.1 7603.9 5051.6 13938.5 12557.6 11791.3 False True 6197.899876542581 8455.086674463899 10959.597450059122 11827.002426453257 11012.66190442298 7935.470138890347 8985.430203524147 5767.679769876174 10781.452005210707 9720.829438368024 8863.194786675409 0.6992850801226065 0.9539547395680569 1.2365290071854638 1.3343949570231182 1.2425160644081745 0.8953284148533248 1.013791349484105 0.6507450088479478 1.2164295454071632 1.0967636018765998 1.0 13.113611104447505 NDEELNKLLGK ddPTM_A549_PD325901_60min_R1 2 NDEELNKLLGK 11 1 A0A0U1RR32;A0A0U1RRH7;P20671;Q99878;Q96KK5;Q6FI13;P0C0S8;Q9BTM1;Q16777;Q9BTM1-2;H0YFX9 A0A0U1RR32;Q99878 HIST1H2AD;HIST1H2AJ;HIST1H2AH;HIST2H2AA3;HIST1H2AG;H2AFJ;HIST2H2AC Histone H2A type 1-D;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A type 2-A;Histone H2A type 1;Histone H2A.J;Histone H2A type 2-C;Histone H2A 0 ; 134.98 5.2211e-08 97718000.0 6824.5 6668.599999999999 8178.7 8773.1 9198.3 11687.7 12134.3 11741.2 11163.0 8804.7 10863.7 False True 7517.318216068636 7230.586325453735 8733.755764518426 9314.994461844275 8552.243140412313 11592.519246244587 12596.07742664374 11507.01255520679 10693.85793037819 8248.769739380496 9527.533770668295 0.7890098735951627 0.7589147936388323 0.916685888997464 0.9776920959883293 0.8976345134290118 1.2167387201432556 1.3220711392724045 1.2077640271013856 1.1224161664270946 0.8657822620136352 1.0 13.217887101390355 -6.388225310819205 1.1588176000490764 1.0979447609468236 0.7748013448986255 0.4992080797192465 0.1256745517914692 0.3422648874777709 0.8314854354481527 0.019016554831061655 0.08080047383650116 4.090483914578665e-07 6.388225310819205 -0.3231434160481981 NDEELNKLLGR ddPTM_A549_PD325901_60min_R1 2 NDEELNKLLGR 11 1 Q93077 Q93077 HIST1H2AC Histone H2A type 1-C 0 ; 116.24 1.9777e-05 11711600.0 3101.2 3057.5 3439.8 4135.8 3695.6 6386.1 5255.200000000001 5757.5 5730.0 4177.6 4541.4 False True 3416.0315410172248 3315.166255297183 3673.2455131977554 4391.258972916702 3436.0338051278777 6334.093718904709 5455.189511755785 5642.662145828629 5489.188026611753 3913.8256230463226 3982.8365903065255 0.8576880983094316 0.8323631110966675 0.9222686971737036 1.1025456037047063 0.8627102134921972 1.5903473756168407 1.3696744488670938 1.416744578364527 1.3782107053981083 0.9826729101996897 1.0 11.959580574007525 -7.212030861550145 24.99988858974206 1.2442608518739267 0.9216612539879209 0.5065814871559218 0.18079393733989668 323.36092674395013 163615.18767943702 0.030593717862743564 0.05298983141776482 6.13718391960631e-08 7.212030861550145 -0.3225995978860058 NDELLSDLTRT(ph)PPPPSSTFPK ddPTM_A549_MK2206_60min_R1 2 NDELLSDLTRTPPPPSSTFPK 21 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NDELLS(0.003)DLT(0.164)RT(0.83)PPPPS(0.001)S(0.001)T(0.001)FPK;NDELLS(0.001)DLT(0.066)RT(0.933)PPPPSSTFPK 188.22 5.3572999999999996e-45 40078000.0 6442.1 9204.2 8941.1 7853.900000000001 11665.0 9601.8 7972.7 9541.9 13192.7 12089.3 11257.5 True False 7529.368985776639 9672.654465683185 10209.082426313087 9778.105852574965 9949.093952532065 10617.856102840993 9421.236389699627 10894.493545843192 10204.574514412838 9358.3187336165 8461.952058805933 0.8897910238029769 1.143076018212291 1.2064689512970004 1.155537845714852 1.1757445425584203 1.2547762063709067 1.113364425161853 1.2874681243916803 1.2059362241119582 1.1059290656081846 1.0 13.046774796789952 -4.10856564278422 12.671795088632454 1.1282642582353546 1.139370554479984 0.0 0.10902866006190341 0.0 0.0 0.01570126557597461 0.0 7.788150892387255e-05 4.10856564278422 0.011106296244629332 NDELLSDLTRT(ph)PPPPSSTFPK ddPTM_A549_PD325901_60min_R1 2 NDELLSDLTRTPPPPSSTFPK 21 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NDELLSDLT(0.123)RT(0.863)PPPPS(0.004)S(0.005)T(0.006)FPK;NDELLS(0.005)DLT(0.172)RT(0.823)PPPPSSTFPK 138.71 1.3227e-18 56575000.0 13114.7 12563.2 14200.8 14893.7 19300.5 16953.1 14725.599999999999 16925.0 16805.9 15977.7 16509.5 True False 14446.094689468142 13621.944954554241 15164.551684347547 15813.650022953128 17944.89946311034 16815.039574382383 15285.990766157503 16587.417597594358 16099.60646709152 14968.86529522866 14478.93616234324 0.9977317758358165 0.9408111757535158 1.0473526172307779 1.092183144234119 1.2393796935013337 1.161344962492125 1.0557399103611802 1.145624057707696 1.111932968456848 1.0338373708808541 1.0 13.821667984063476 -5.925836249391598 4.407806431974111 1.0835951098757397 0.9703095961528322 0.36076858860478833 0.0653790045886989 0.22309438568109502 8.276675282799973 0.010828767266708506 0.035892254354916255 1.1862159262285159e-06 5.925836249391598 -0.11328551372290752 NDGQASS(ph)SPPSESMGQAK ddPTM_A549_MK2206_60min_R1 1 NDGQASSSPPSESMGQAK 18 0 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 NDGQAS(0.065)S(0.46)S(0.46)PPS(0.013)ES(0.002)MGQAK 69.594 0.00048507 1849100.0 0.0 237.1 286.27 143.27 389.27 241.56 206.34 0.0 247.6 414.88 298.74 True False 0.0 249.16737726401888 326.8673906097293 178.3711564316347 332.0088986628507 267.12171886544945 243.82930709177825 0.0 191.51899533595235 321.1583198533262 224.55461319544162 0.0 1.1096070293027358 1.4556253641747252 0.7943330751187416 1.4785218345698647 1.1895623744454515 1.0858352167521976 0.0 0.8528838157035027 1.4302013896895778 1.0 7.810922550573226 NDIS(ph)PPGR ddPTM_A549_MK2206_60min_R1 2 NDISPPGR 8 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 NDIS(1)PPGR;NDIS(1)PPGR 116.12 0.0012915 138736000.0 10589.1 13989.2 14589.6 13515.900000000001 20329.2 15287.0 14239.599999999999 15791.599999999999 22627.0 19687.5 19189.6 True False 12376.281201360955 14701.19052729571 16658.624662171038 16827.29610675182 17338.801609928392 16904.660193310654 16826.75099963209 18030.107659746733 17502.020627894173 15240.080076437427 14424.292713982892 0.8580165036004437 1.0191966302128903 1.1549006244182904 1.1665941922018443 1.202055584543163 1.1719576500914528 1.1665564012937881 1.2499820973730218 1.2133711492784485 1.056556489710148 1.0 13.816212958520987 -5.419768317748499 2.466578771059072 1.1355391212709502 0.8394306233335469 0.6179441615487331 0.06910349902626979 0.27397448569909105 2.5396590484338577 0.013088437909705656 0.14552336934202406 3.8039226934326244e-06 5.419768317748499 -0.29610849793740335 NDIS(ph)PPGR ddPTM_A549_PD325901_60min_R1 2 NDISPPGR 8 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 NDIS(1)PPGR;NDIS(1)PPGR 112.3 0.0014498 173729000.0 14876.5 14698.2 16095.6 17416.8 20316.1 19411.4 18026.3 18685.5 20491.9 17791.2 18716.0 True False 16386.75132849952 15936.868897337377 17187.94420670556 18492.596179577267 18889.167222740147 19253.31999422917 18712.300710869855 18312.80304400882 19630.696705501825 16667.86059573482 16414.050650499168 0.9983368321092138 0.9709284585918297 1.0471482373659458 1.1266320893809896 1.1507925511467645 1.1729779811325034 1.140017239455807 1.115678477783417 1.1959690586738159 1.0154629683214687 1.0 14.002643689836585 -6.006524605471443 3.3607326062486296 1.1109961737502618 0.9855707628413622 0.4422532509035476 0.05701005943275558 0.21973624603831596 5.180987172904722 0.010510058017169976 0.03455205360413352 9.850888298413391e-07 6.006524605471443 -0.12542541090889958 NDKS(ph)EEEQS(ph)S(ph)SSVKKDETNVK ddPTM_A549_PD325901_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 3 NDKS(1)EEEQS(0.934)S(0.494)S(0.322)S(0.25)VKKDETNVK 110.03 1.1615999999999999e-10 73301000.0 9192.4 9465.5 9547.7 9458.0 12755.0 10925.0 10743.0 11890.0 12319.0 11383.0 11748.0 True False 10125.605680912779 10263.190904175139 10195.664336984191 10042.199179323514 11859.132802361206 10836.030422172202 11151.83074379517 11652.844622475444 11801.275270476477 10664.27543736507 10303.070476707857 0.9827755428640158 0.9961293506995925 0.989575327086573 0.9746802375103524 1.1510289897726254 1.0517282635957124 1.0823793517676215 1.1310069797949087 1.1454134276918333 1.0350579918359084 1.0 13.330786726801126 -6.734981356557386 24.995838423641914 1.0794420660049813 0.9867989568634911 0.5375196023987747 0.04416019288733758 191.75371807764884 181155.6568762322 0.008359095778506536 0.017397013114453852 1.840851024033659e-07 6.734981356557386 -0.09264310914149021 NDKS(ph)EEEQSS(ph)SSVKKDETNVK ddPTM_A549_MK2206_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(1)EEEQS(0.131)S(0.787)S(0.055)S(0.027)VKKDETNVK 131.57 4.949e-18 73618000.0 4401.3 6721.4 6004.2 5966.3 10269.0 7594.8 6658.6 6998.7 9495.7 9342.9 6701.9 True False 5144.131838546243 7063.490550579407 6855.685844478767 7428.043767837383 8758.443703262048 8398.476694979778 7868.381429685545 7990.78715761984 7344.9391115169765 7232.3324010741435 5037.633266969708 1.0211405963738598 1.4021446533023065 1.3608941900216318 1.4745106231811076 1.7386028793895358 1.6671472991188423 1.5619202535595889 1.5862185145578385 1.4580138573555166 1.435660759288382 1.0 12.298530384268586 -10.405741190559883 0.8115405165753126 1.0063254866443634 1.4869277506662473 0.056827706470856665 0.21787895288546202 0.4209649412108917 0.5119047536561405 0.11661497330557867 0.036709771643783425 3.928789943283981e-11 10.405741190559883 0.4806022640218839 NDKS(ph)EEEQSSS(ph)SVKKDETNVK ddPTM_A549_MK2206_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(1)EEEQS(0.001)S(0.09)S(0.572)S(0.337)VKKDETNVK 172.75 1.2816e-35 47199000.0 4238.4 5816.9 5431.7 5202.2 8507.9 7002.4 6575.6 6649.5 7977.1 8630.8 5784.3 True False 4953.738301068864 6112.955364011272 6201.996735860783 6476.739233535629 7256.399180346981 7743.389320183069 7770.301404054945 7592.0869882396855 6170.299586811089 6681.096285649068 4347.898671441365 1.1393407885990723 1.4059562620820636 1.4264354357192894 1.4896251552680586 1.6689439494093417 1.7809498116974447 1.7871394876548548 1.7461508562992443 1.4191452131439815 1.5366264925935424 1.0 12.086102603152314 -9.95197221261139 0.9133049535097422 1.0478094930173734 1.5546385665662406 0.03912252738565525 0.2386369180289472 0.3150619989946575 0.5350958891091724 0.08007428970571626 0.04148032523077793 1.116934710134447e-10 9.95197221261139 0.5068290735488672 NDKS(ph)EEEQSSSS(ph)VKKDETNVK ddPTM_A549_MK2206_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(1)EEEQS(0.031)S(0.138)S(0.119)S(0.711)VKKDET(0.001)NVK 143.12 4.9384e-22 40252000.0 4295.0 5820.9 6029.3 5068.6 7823.4 7387.1 6743.8 7100.6 9520.2 8297.5 7683.4 True False 5019.890997331723 6117.158946925888 6884.3454019046385 6310.407227538102 6672.588223595313 8168.798018839876 7969.061166838878 8107.131794675503 7363.889900635439 6423.088987135975 5775.39972894777 0.869185031846498 1.0591749894410136 1.1920119342386901 1.0926355791286166 1.1553465624466834 1.4144125778681234 1.3798285037996452 1.4037351828723648 1.2750441954217908 1.1121462216618223 1.0 12.495705086950654 -5.063071528651063 1.1999965337735994 1.191438761609507 0.5932175280194131 0.38385510059909034 0.13187932044356535 2.4941417832973563 2.17680639824345 0.02454237500743667 2.070215140114962 8.648254695936702e-06 5.063071528651063 -0.5982212335900939 NDKS(ph)EEEQSSSS(ph)VKKDETNVK ddPTM_A549_PD325901_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(0.991)EEEQS(0.009)S(0.009)S(0.184)S(0.807)VKKDET(0.001)NVK 136.89 2.0196e-18 124680000.0 13469.0 14384.0 16331.0 13520.0 16980.0 16435.0 17659.0 18169.0 17240.0 14511.0 16503.0 True False 14836.36296464626 15596.190160652393 17439.319866280766 14355.099693852184 15787.383377819928 16301.158809006884 18331.02290837558 17806.605041695224 16515.462753714946 13594.772983537245 14473.235621136351 1.0250895758913512 1.0775883547336234 1.204935808604734 0.9918376284075936 1.0907984773470023 1.1262967891713915 1.2665462919435522 1.2303126617859315 1.1411037024503476 0.9393043365979462 1.0 13.82109986484276 -10.591960871572569 1.032770491447542 1.0048019877390086 1.1297686609026811 0.3373955389141161 0.08207441044026079 0.5566887153148145 1.1144685489941957 0.04621721554124022 0.01477465414664408 2.5588164170100932e-11 10.591960871572569 0.12496667316367249 NDKS(ph)EEEQSSSSVK ddPTM_A549_MK2206_60min_R1 13 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(0.975)EEEQS(0.025)SSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(0.996)EEEQS(0.002)S(0.002)SSVK;NDKS(0.999)EEEQSSSSVK 313.04 2.4461999999999993e-136 5164316200.0 82519.12000000002 112551.68000000001 114972.07 109579.53 154854.91999999998 124722.88999999998 120863.98999999999 128091.00000000001 167266.55 148332.59000000003 132502.34 True False 96446.33005721445 118280.07976490581 131276.83834806003 136426.51976921177 132075.96640307223 137920.98343544587 142823.4124941729 146248.29151223536 129380.9434947935 114824.15489754226 99598.35209945402 0.9683526687360037 1.1875706502332202 1.3180623532503173 1.3697668374370586 1.3260858600470384 1.3847717409794569 1.4339937306548654 1.4683806351153181 1.2990269494177982 1.1528720353011916 1.0 16.60383425198725 -10.40144166000762 0.9032970616778669 1.0117156136531735 1.3130899578549533 0.278094830012641 0.1354938317785368 0.4133001103383731 0.6397805534586253 0.07383578389014561 0.02571598120690089 3.96787826970262e-11 10.40144166000762 0.3013743442017798 NDKS(ph)EEEQSSSSVK ddPTM_A549_PD325901_60min_R1 8 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(0.999)EEEQS(0.001)SSSVK;NDKS(0.999)EEEQS(0.001)SSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK 316.96 1.3260999999999997e-156 7335235900.0 120621.59999999999 120538.69999999998 141259.59999999998 133947.0 162598.4 143266.0 146122.90000000002 150153.90000000002 154129.1 140579.9 144551.2 True False 132867.01603507143 130696.9192796043 150846.32591898038 142220.60197429144 151178.0493180282 142099.28919569074 151683.6869210189 147158.96267104446 147651.58992538304 131703.66112248434 126772.31878555435 1.048075930991108 1.030957866288529 1.189899556654392 1.1218584887988765 1.1925162430274556 1.1209015545109906 1.1965047920090832 1.1608130550958506 1.164698976399948 1.0388992043702518 1.0 16.951880236392615 -10.755937347991924 0.9843421412984896 0.9992394604616853 1.1389374324191592 0.40665676680129237 0.0537049711326977 0.3919353498474203 0.6686311820284988 0.03847068141111215 0.009601569288413277 1.754133537665044e-11 10.755937347991924 0.1396979719574739 NDKS(ph)EEEQSSSSVKK ddPTM_A549_MK2206_60min_R1 8 NDKSEEEQSSSSVKK 15 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK;NDKS(0.999)EEEQS(0.001)SSSVKK;NDKS(0.998)EEEQS(0.002)SSSVKK;NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK 136.04 3.9300999999999997e-10 232320700.0 16698.52 25159.399999999998 23982.2 23841.109999999997 31273.300000000003 24849.0 23089.9 22517.3 34741.5 35933.4 31189.199999999997 True False 19516.82193638271 26439.90599551395 27383.23657763876 29682.18302026811 26673.038997489995 27478.50468656878 27285.035949493307 25709.196231339127 26872.60572077541 27816.01998316987 23444.060861870745 0.8324846984220524 1.1277869542863892 1.168024462100534 1.266085393445766 1.1377311786829063 1.1720880972144048 1.1638357411820874 1.0966187292728105 1.1462436426481397 1.1864847198212853 1.0 14.516934867306883 -10.71943726628587 0.8048023041540112 0.9932418608541169 1.1324483277195798 0.0 0.11529808254761832 0.9797403877263021 1.0380977157449613 0.08698306017316852 0.018635393392419375 1.907931304218946e-11 10.71943726628587 0.1392064668654629 NDKS(ph)EEEQSSSSVKK ddPTM_A549_PD325901_60min_R1 4 NDKSEEEQSSSSVKK 15 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVKK;NDKS(0.959)EEEQS(0.04)S(0.001)SSVKK;NDKS(1)EEEQSSSSVKK;NDKS(0.999)EEEQS(0.001)SSSVKK 148.91 1.5844999999999998e-14 444696000.0 32326.8 30388.199999999997 36658.4 35006.6 43393.0 40307.1 41614.0 40058.9 42983.5 37228.8 40859.9 True False 35608.59293826765 32949.12026139716 39146.25946886695 37168.87817624303 40345.22537772323 39978.852341376405 43197.64354205454 39259.89381390087 41177.0529741477 34878.16721449326 35834.39133224681 0.9936988355157028 0.9194831846284707 1.0924214982728015 1.0372403937776764 1.1258800241269118 1.1156559621929467 1.2054800412692277 1.095592595668606 1.1490931321356954 0.9733154636592626 1.0 15.129057229267676 -5.770280046295967 24.9644071684299 1.088005623499585 0.9565910088539724 0.38139838787994307 0.06469362567114231 133.42741575337527 376778.68954105076 0.009556054321140702 0.030357917987739447 1.6971489262774355e-06 5.770280046295967 -0.13141461464561255 NDKS(ph)EEEQSSSSVKKDETNVK ddPTM_A549_MK2206_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVKKDETNVK 155.56 3.7943e-28 67034000.0 4559.0 8579.1 8783.3 8563.7 11272.0 6601.5 6122.6 6204.2 14536.0 12845.0 12029.0 True False 5328.447743151411 9015.739545701155 10028.904013492276 10661.806884439102 9613.903731928105 7300.066348278949 7234.997167781925 7083.664349565632 11243.619209222152 9943.305578760057 9041.867316489146 0.589308331635681 0.9971103567577968 1.1091629264679792 1.1791598473244307 1.0632652963614904 0.8073626932089821 0.8001662615185545 0.7834293627210775 1.2435063262560593 1.0996960285655828 1.0 13.1424050318647 -8.765142594157108 24.999941978165374 1.1149890910767273 0.9314374233924351 0.20969658457230778 0.16954559423996995 127.63815711350922 861666.7260372093 0.032440565045895396 0.03519206741090162 1.7173444299857546e-09 8.765142594157108 -0.1835516676842922 NDKS(ph)EEEQSSSSVKKDETNVK ddPTM_A549_PD325901_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVKKDETNVK 151.31 6.362e-23 152640000.0 7923.5 8970.8 12094.0 13047.0 12375.0 18734.0 14466.0 17940.0 16743.0 15902.0 15909.0 True False 8727.88788702759 9726.800799025335 12914.771567129972 13852.883558113128 11505.822691432379 18581.436515237903 15016.511546098944 17582.172626342268 16039.349935350896 14897.945006147702 13952.2938554601 0.6255521835652861 0.6971470712838264 0.9256378700822658 0.9928749854054952 0.8246545557761229 1.3317836269601095 1.0762754642113828 1.260163583743733 1.1495851579325822 1.0677774680267023 1.0 13.768214710338176 -5.804268884277014 0.85194272742698 1.0969408386906379 0.5209212905939511 0.6661965732343165 0.12051294248861485 0.5906416447736538 0.4994603816762983 0.01971436841910025 0.2657680302046287 1.5693908482080707e-06 5.804268884277014 -0.5760195480966868 NDKSEEEQS(ph)S(ph)SSVKKDETNVK ddPTM_A549_PD325901_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKSEEEQS(0.975)S(0.452)S(0.304)S(0.268)VKKDETNVK 102.67 3.7451e-10 196740000.0 1884.2 2376.4 2740.2 2520.9 2207.1 2884.5 2564.7 2795.5 2465.2 2765.7 2257.6 True False 2075.482596925271 2576.667567976525 2926.166450161199 2676.6102676207065 2052.080910081647 2861.0095883529275 2662.3010619576894 2739.741559472673 2361.5962169639242 2591.0732300026852 1979.92951210552 1.0482608518311023 1.3013935860961103 1.4779144571916707 1.3518714940383478 1.0364413972997446 1.4450057796807316 1.3446443652059683 1.3837571199992593 1.1927678245739808 1.3086694319977359 1.0 10.951233354186176 -9.67066734360459 0.8829831109352579 1.028152453452795 1.3019470782976095 0.0 0.16075550644249073 0.37164240550037825 0.6083841054141312 0.04599982818841637 0.028382851927347415 2.1346793867260767e-10 9.67066734360459 0.2737946248448144 NDKSEEEQS(ph)SSS(ph)VKKDETNVK ddPTM_A549_MK2206_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(0.024)EEEQS(0.939)S(0.069)S(0.174)S(0.794)VKKDETNVK 141.37 5.2112e-22 76888000.0 4142.2 5828.2 6267.9 5533.5 7947.5 6045.0 6697.0 6866.5 8782.6 8032.0 8843.6 True False 4841.302092933052 6124.830485745066 7156.782469705948 6889.207748408257 6778.433277989588 6684.677887653754 7913.7582126278885 7839.847402774314 6793.355122930276 6217.565621533733 6647.490049056733 0.7282902354430789 0.9213749009844954 1.0766142434047692 1.036362250649149 1.019698145911694 1.0055942676593095 1.1904881623329149 1.1793695582721142 1.0219428796127705 0.9353252995716773 1.0 12.698593997107986 -5.383904910152194 2.547679125326087 1.0391038103270753 0.7014964141764051 0.6297593229586822 0.07327901182838267 0.19422787118231644 1.868218091058716 0.010264005486837178 0.123610967709303 4.131379496608282e-06 5.383904910152194 -0.33760739615067026 NDKSEEEQS(ph)SSS(ph)VKKDETNVK ddPTM_A549_PD325901_60min_R1 2 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(0.003)EEEQS(0.995)S(0.03)S(0.153)S(0.818)VKKDETNVK;NDKSEEEQS(0.999)S(0.002)S(0.177)S(0.822)VKKDETNVK 154.69 7.815000000000001e-28 408810000.0 6388.1 7251.4 8277.1 8132.2 8551.7 7384.900000000001 8659.6 9093.2 8113.200000000001 7811.1 8776.3 True False 7036.615209329331 7862.500926790509 8838.833780245695 8634.507524433784 7951.05809376341 7324.759822855793 8989.145816714941 8911.8289925226 7772.230418413002 7317.9058129493305 7696.870737549471 0.9142176670579826 1.021519159524533 1.1483671847475774 1.1218205188648962 1.0330247661525451 0.9516542595839214 1.167896164977938 1.157850936621023 1.009790950560711 0.9507637665328915 1.0 12.91005630332373 -8.959070498809057 24.997597898330415 1.0043194038110168 1.0675305174815155 0.14704960845344728 0.08024944353322527 240.76420456443003 147046.6995366858 0.01387458075122276 0.014754226374664252 1.0988274528357226e-09 8.959070498809057 0.0632111136704987 NDKSEEEQS(ph)SSSVKKDETNVK ddPTM_A549_MK2206_60min_R1 4 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.333)S(0.333)S(0.333)S(0.001)VKKDETNVK;NDKS(0.004)EEEQS(0.647)S(0.166)S(0.091)S(0.091)VKKDETNVK;NDKS(0.003)EEEQS(0.769)S(0.176)S(0.042)S(0.01)VKKDETNVK;NDKSEEEQS(0.25)S(0.25)S(0.25)S(0.25)VKKDETNVK 88.79 9.214200000000001e-07 388479100.0 4677.93 5643.400000000001 5977.4 4838.089999999999 7758.299999999999 4765.3 5614.8 6002.0 8171.5 8937.2 8908.7 True False 5467.450219592077 5930.624955089686 6825.085201490179 6023.422267190115 6617.064347357867 5269.560883049867 6634.9364808515875 6852.801880354105 6320.668297204099 6918.280312845032 6696.42392238813 0.8164731329676979 0.8856406081553243 1.0192134310182925 0.8994983497164851 0.9881489619011513 0.7869216381944044 0.9908178690224536 1.0233524579355195 0.9438871210157754 1.0331305773093562 1.0 12.709175146386672 -2.0000000000000004 0.2038220076076559 0.9879031702323097 0.38861308341878126 0.28549236401840616 0.0690943680951831 54.22644841244236 0.6082606092834355 0.050249198739004686 10.575364333301954 0.00999999999999999 2.0000000000000004 -0.5992900868135285 NDKSEEEQSS(ph)SSVK ddPTM_A549_MK2206_60min_R1 4 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.016)S(0.965)S(0.016)S(0.002)VK;NDKSEEEQS(0.031)S(0.966)S(0.003)S(0.001)VK;NDKSEEEQS(0.109)S(0.876)S(0.014)S(0.002)VK;NDKSEEEQS(0.233)S(0.758)S(0.009)SVK 120.11 6.6521e-07 97284800.0 7512.839999999999 9163.5 8679.2 8655.9 11576.3 9637.0 10140.8 10414.7 11807.0 12470.4 12456.5 True False 8780.823720697004 9629.883009526944 9910.041068152303 10776.595888578117 9873.441605031885 10656.780943477126 11983.252095358654 11891.015618681095 9132.733351904646 9653.32797893106 9363.207268089367 0.9378008485001527 1.0284812387253706 1.0584024025535133 1.150951333236604 1.0544935428997115 1.1381549759980611 1.2798234357364522 1.269972486800193 0.9753851528022672 1.0309851851544982 1.0 13.192787079128134 NDKSEEEQSS(ph)SSVK ddPTM_A549_PD325901_60min_R1 2 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.126)S(0.873)S(0.001)SVK;NDKSEEEQS(0.12)S(0.878)S(0.002)SVK 194.19 1.9076e-28 124895000.0 16594.0 17173.7 19022.2 16960.7 21706.0 17122.0 18277.4 18709.3 18541.1 18936.5 18798.8 True False 18278.61066414285 18620.987970105394 20313.160881781023 18008.32391845552 20181.445441634834 16982.564108781007 18972.956458777044 18336.128334338086 17761.882045412072 17740.84615827669 16486.66677541161 1.1086904899056833 1.1294574108744002 1.2320962847430317 1.092296227234563 1.224107074920302 1.0300786896541747 1.1508060857439972 1.1121792284711414 1.077348277087903 1.0760723437884714 1.0 14.009012128072063 -9.36019806255052 0.38252123988205256 0.9903152865447702 1.1560927112184376 0.3009535028458613 0.05690078694697258 0.6536667919118982 0.23558659304968682 0.04141251561048315 0.02244448688866573 4.363168020176725e-10 9.36019806255052 0.1657774246736674 NDKSEEEQSS(ph)SSVKK ddPTM_A549_PD325901_60min_R1 1 NDKSEEEQSSSSVKK 15 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.134)S(0.289)S(0.289)S(0.289)VKK 62.765 0.00097146 31597000.0 1641.1 1621.3 1824.3 1687.5 2446.4 2158.3 1777.9 2048.0 1978.7 1807.0 1571.6 True False 1807.7032638860323 1757.9326409528437 1948.1079684070771 1791.733042409434 2274.5733036218326 2140.723520382084 1845.558957404211 2007.1510333750807 1895.542120114603 1692.9057116154504 1378.3031631932306 1.3115425634647566 1.2754324940240966 1.4134103587876357 1.2999556920832827 1.6502706838110548 1.5531586791272323 1.3390079967083945 1.456247861120006 1.375272270088274 1.2282535198521591 1.0 10.4286775340476 -10.396996859227793 0.6868948892458272 0.9881270079136583 1.4161521515775404 0.41525214506707286 0.12504032571201162 0.37345438690770943 0.3102203854109803 0.08676310805834524 0.023633116418754818 4.0086961666390276e-11 10.396996859227793 0.4280251436638821 NDKSEEEQSSS(ph)SVK ddPTM_A549_MK2206_60min_R1 1 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQSS(0.009)S(0.849)S(0.142)VK 200.99 5.2771e-32 36642000.0 3888.4 4774.6 5121.9 5040.2 7249.7 6338.0 5213.7 6593.4 7942.4 7816.1 7248.8 True False 4544.666857747302 5017.606746034523 5848.26243743309 6275.049226263174 6183.278733619515 7008.682953176094 6160.961802774085 7528.034641440648 6143.45908140658 6050.437581482798 5448.722903297577 0.8340792766313847 0.9208775772021472 1.0733271889994094 1.151655046077954 1.1348124768608407 1.2862982899964368 1.1307166673947504 1.3816145131705388 1.1275044061588353 1.1104322405202625 1.0 12.411702408682899 -5.691234586396047 2.4386411894463094 1.1159851361756388 0.840953746347497 0.5047104721154441 0.1024204013356839 0.24930313915361388 2.7807127377453247 0.01707702287442317 0.09787481560990983 2.035942056077902e-06 5.691234586396047 -0.2750313898281418 NDKSEEEQSSS(ph)SVK ddPTM_A549_PD325901_60min_R1 2 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQSS(0.007)S(0.598)S(0.395)VK;NDKSEEEQSS(0.006)S(0.553)S(0.441)VK 172.66 3.3472e-23 93932000.0 21224.3 18409.7 22362.5 20766.6 26848.6 21019.2 23357.1 20674.4 22511.3 22307.2 23587.6 True False 23378.975311496157 19961.15002784777 23880.153726636676 22049.305717629493 24962.84695864172 20848.02660409356 24245.967221995554 20262.03287324695 21565.22834615447 20898.71958502943 20686.474734115956 1.1301575358772826 0.9649372493094733 1.1543848835323174 1.0658802913995766 1.2067231019054787 1.0078095408741237 1.1720685875012484 0.9794821560307219 1.0424796212662217 1.0102600783188758 1.0 14.336400190192654 -8.279553312673292 24.905911528182877 1.0175769918890825 1.096369952757443 0.2938590065499278 0.06802165911495166 798.6568712256046 1098117.7078167226 0.010174209880443435 0.012311744450561197 5.253475210834168e-09 8.279553312673292 0.07879296086836063 NDKSEEEQSSS(ph)SVKK ddPTM_A549_PD325901_60min_R1 1 NDKSEEEQSSSSVKK 15 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.012)S(0.072)S(0.458)S(0.458)VKK 63.336999999999996 0.00092772 29748000.0 1863.1 2123.5 2148.6 2274.2 2871.1 1917.9 2277.2 2010.8 2344.9 1845.1 2033.1 True False 2052.2405404582696 2302.4547974238985 2294.4169165814005 2414.672168917058 2669.443840757293 1902.2812582777187 2363.860092131653 1970.6930165579165 2246.3520076094073 1728.6000711132638 1783.0415888827672 1.1509773822741731 1.2913073995467428 1.286799439164543 1.3542433244252385 1.497129319585829 1.0668743063192743 1.3257459090524186 1.105242316749734 1.2598427437785928 0.9694670510721985 1.0 10.80012463842431 -11.495879597827985 0.3130953714730241 0.795776111926599 1.293626664151748 0.48039677719591367 0.11262703303580751 3.879580089236318 0.32499114007769414 0.7128081180308723 0.04532655974680943 3.1924227877381337e-12 11.495879597827985 0.49785055222514896 NDKSEEEQSSS(ph)SVKKDETNVK ddPTM_A549_PD325901_60min_R1 3 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQSS(0.134)S(0.731)S(0.134)VKKDETNVK;NDKSEEEQS(0.07)S(0.265)S(0.555)S(0.11)VKKDETNVK;NDKSEEEQS(0.002)S(0.115)S(0.867)S(0.016)VKKDETNVK 178.33 3.5314999999999996e-36 321288000.0 11747.099999999999 11593.0 14764.400000000001 16912.2 16429.0 16601.5 15982.099999999999 16849.9 17770.0 18549.3 17106.4 True False 12939.656944242046 12569.982795637035 15766.400969549668 17956.828183607005 15275.083716973133 16466.302888209793 16590.307561240694 16513.815526009166 17023.18869683958 17378.094032356665 15002.421246404094 0.8625045738762689 0.837863608092588 1.0509237616113927 1.1969286749571206 1.0181745643646951 1.0975763590264855 1.105842003017826 1.1007433570076122 1.134696087867806 1.158352625015245 1.0 13.872907736156392 -5.793924413218739 5.621120250539465 1.0781555985765738 0.8487671994188312 0.7294012890679649 0.05700818823188105 0.06959186160781543 5.855406193648023 0.008533232014440407 0.028829507206540303 1.6072209574363149e-06 5.793924413218739 -0.22938839915774267 NDKSEEEQSSSS(ph)VK ddPTM_A549_MK2206_60min_R1 1 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQSS(0.003)S(0.248)S(0.749)VK 148.26 8.154900000000001e-14 26231000.0 3046.1 3108.7 3330.0 4024.0 5652.5 3966.5 4302.3 4509.8 5680.4 5458.9 5287.2 True False 3560.2072100051582 3266.91955166873 3802.2440728347306 5009.8801806442225 4821.024737821473 4386.232397250391 5083.972220126769 5149.077960683259 4393.79846973483 4225.730698629295 3974.2423207034185 0.8958203659244969 0.8220232406690551 0.9567217512196777 1.2605874972811175 1.2130676362402024 1.1036650619920056 1.279230557644239 1.2956124828774662 1.1055688393346768 1.0632795782521294 1.0 11.956464125095422 -6.0317215545011456 6.777375757288791 1.1116887858807707 0.8652967989245413 0.566869838222648 0.10095733046145838 0.13796395201615202 21.994020121150164 0.017228481089143155 0.047762153113297366 9.295621794017428e-07 6.0317215545011456 -0.24639198695622944 NDKSEEEQSSSS(ph)VKK ddPTM_A549_MK2206_60min_R1 1 NDKSEEEQSSSSVKK 15 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.018)S(0.137)S(0.097)S(0.747)VKK 99.569 1.9121e-06 13854000.0 2029.0 2361.2 2608.3 2264.8 3001.1 2252.2 1794.6 2303.5 2620.0 3329.4 3059.5 True False 2371.4455957127043 2481.374994499373 2978.1961607131598 2819.676101670737 2559.6421655331296 2490.5263091106362 2120.65559032134 2630.0281791728903 2026.5741832802707 2577.2862276312767 2299.741712095646 1.0311791029574873 1.0789798617159545 1.295013324778664 1.2260838192569457 1.1130128883911266 1.082959141025075 0.9221277238081169 1.143618940048824 0.8812181701194389 1.1206850813184221 1.0 11.167256123395502 -7.547709973297331 1.5829638770382937 0.9563910056867024 1.1615622739372569 0.1886205459906899 0.10433299258550847 0.24827856956924987 1.2476744280699088 0.015793153073852245 0.026972559552596764 2.833283462479542e-08 7.547709973297331 0.20517126825055443 NDKSEEEQSSSS(ph)VKKDETNVK ddPTM_A549_MK2206_60min_R1 3 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQSS(0.002)S(0.134)S(0.864)VKKDETNVK;NDKSEEEQSS(0.003)S(0.212)S(0.785)VKKDETNVK;NDKSEEEQSS(0.003)S(0.143)S(0.855)VKKDETNVK 232.32 4.5320999999999995e-77 1214946000.0 39261.9 54838.0 55524.8 49347.2 75426.0 61079.0 58161.0 59158.0 78595.0 74052.0 66218.0 True False 45888.34885870509 57629.01996796403 63399.05156016028 61437.26621527998 64330.93531621805 67542.33923904116 68728.1008518218 67543.82766377671 60793.3579904248 57323.60176865245 49774.24307617246 0.9219296170607646 1.1578080630934144 1.2737321080530943 1.2343184429999048 1.2924543165381466 1.3569737089859335 1.3807965044620194 1.3570036124991476 1.2213818680756057 1.151671993905096 1.0 15.603111756398182 -10.243680750343701 0.9044193374914323 1.0146067857945666 1.251561588082512 0.17624942690563494 0.12748954304530188 0.4538380583331651 0.7261635642903437 0.059993207766850104 0.02433803616823028 5.705835538399064e-11 10.243680750343701 0.2369548022879453 NDKSEEEQSSSS(ph)VKKDETNVK ddPTM_A549_PD325901_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.145)S(0.145)S(0.145)S(0.565)VKKDETNVK 256.85 6.7375999999999995e-99 229680000.0 13409.0 11900.0 15202.0 14340.0 17057.0 15870.0 15828.0 16475.0 15017.0 14622.0 15116.0 True False 14770.271808815925 12902.85476305363 16233.699137052228 15225.749231497064 15858.975163455516 15740.759981681727 16430.343201413947 16146.393200612529 14385.887713024205 13698.764424593874 13256.827828218922 1.1141633579471732 0.9732988110163268 1.2245538184102112 1.148521307570053 1.1962873297409489 1.1873700243866354 1.2393872360957856 1.2179680848115702 1.0851681789516743 1.033336526814826 1.0 13.694447979736236 -9.271379341296642 1.570556090309285 1.0253990473624517 1.1610748484681372 0.37096804490235724 0.0716297106302308 0.2602951580212018 1.3270922664134035 0.016672105418929165 0.014713946126988146 5.353288618879147e-10 9.271379341296642 0.13567580110568556 NDKSEEEQSSSSVK ddPTM_A549_MK2206_60min_R1 2 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 149.44 2.3461999999999996e-13 26445000.0 3650.8999999999996 4051.2 3933.2000000000003 4478.1 5892.5 4606.6 4439.6 4268.0 6457.5 6028.0 5534.0 False True 4267.0826640648165 4257.38877592574 4490.986903085151 5575.234701029549 5025.721055747548 5094.067354386399 5246.2178528867835 4873.002070201819 4994.886560508535 4666.270613372179 4159.755069369935 1.0258014216955178 1.0234710229154413 1.0796277252365696 1.3402795616699643 1.2081771575336473 1.2246075236246976 1.2611843162394203 1.171463701332761 1.2007645828207607 1.1217657134988392 1.0 12.0222828681707 -3.85322303762667 15.808670470504554 1.1312707469099728 1.1468246811181886 0.0 0.10633025407027058 0.0 0.0 0.016396066806685126 0.0 0.00014020934561493335 3.85322303762667 0.015553934208215825 NDKSEEEQSSSSVK ddPTM_A549_PD325901_60min_R1 4 NDKSEEEQSSSSVK 14 1 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ;;; 182.18 5.8452e-26 49426000.0 17632.9 16660.399999999998 18389.4 18775.3 21459.5 20842.4 20542.2 20333.7 20492.2 20039.8 19837.3 False True 19422.979027345085 18064.430377678873 19637.4152684455 19935.00763919991 19952.25875125601 20672.666404675692 21323.944662123162 19928.12840202093 19630.984097545104 18774.483607986345 17397.437859005524 1.1164275558708818 1.0383385487034857 1.128753292731578 1.145858821325282 1.1468504105578983 1.1882592466898678 1.2256945439287854 1.1454634046418182 1.128383630776035 1.0791522154090072 1.0 14.086587233883273 -10.33662727864931 0.8032159765092828 1.0030490065285604 1.1412851813277232 0.3564401384153624 0.04880720967892423 0.37105221167017644 0.4495901722807225 0.02878512175037796 0.0096496832453903 4.6065174573512755e-11 10.33662727864931 0.13823617479916273 NDLAVVDVR ddPTM_A549_MK2206_60min_R1 2 NDLAVVDVR 9 0 P19338 P19338 NCL Nucleolin 0 ; 108.43 0.0012312000000000002 11018100.0 2135.8999999999996 3006.8999999999996 3191.8999999999996 2934.3999999999996 4113.1 3200.6 2865.2 3085.9 4492.1 4142.6 3989.3 False True 2496.3877022586325 3159.938366491685 3644.5594162405937 3653.328131730222 3508.0684385906216 3539.285367613665 3385.769752250474 3523.3357751723966 3474.646522409659 3206.783782839349 2998.646710921119 0.8325047739591159 1.0537881488283163 1.2154014018947448 1.2183256261648774 1.169883876554774 1.1802942156285139 1.1290992499781474 1.1749752854647237 1.1587382100582044 1.069410334722057 1.0 11.550095844072578 -5.306118856717199 3.5611468768744245 1.1169369059259857 0.8117497835190294 0.6327720270415392 0.06644329464301513 0.16733201692159097 3.6880679990455465 0.012149819075801191 0.12564370570383596 4.941754236824724e-06 5.306118856717199 -0.30518712240695633 NDLAVVDVR ddPTM_A549_PD325901_60min_R1 2 NDLAVVDVR 9 0 P19338 P19338 NCL Nucleolin 0 ; 112.75 0.00073713 28264000.0 2302.69 2876.2 3031.5 2832.2 3883.0 3584.9 2993.1000000000004 3255.0 3639.6000000000004 3330.0 3559.3 False True 2536.457393649217 3118.5874680247784 3237.2358198904 3007.1385616071098 3610.2714756227792 3555.705762969807 3107.004058387165 3190.076471501899 3486.6402690499376 3119.7432316986456 3121.5286642616875 0.8125689898955796 0.9990577705498647 1.037067465358701 0.9633544602795971 1.156571623690885 1.1390911778831325 0.9953469573927626 1.0219596917449498 1.1169656421766696 0.9994280262156541 1.0 11.6080369984457 -4.517152339525089 1.0801363847374947 1.0578241754456426 2.6494373556863496e-09 0.5539109958789237 0.06061350949702524 4.150819883178447 1.1992687822081807 0.00947052053830933 7.431552466984223 3.039818547142021e-05 4.517152339525089 -1.0578241727962052 NDLQDTEIS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NDLQDTEISPR 11 0 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NDLQDTEIS(1)PR;NDLQDTEIS(1)PR 192.18 2.7401000000000003e-19 352650000.0 7815.1 8903.1 9129.400000000001 8590.1 11669.900000000001 8886.3 8462.0 8920.9 11700.5 11464.6 11737.0 True False 9134.097819149509 9356.229761785264 10424.08619775898 10694.67488562424 9953.273169023052 9826.642367751465 9999.435866097834 10185.464894110444 9050.355431859087 8874.738897489502 8822.378975279164 1.0353327424205874 1.0605109787282978 1.1815504896091968 1.2122212065012579 1.128184721707458 1.1138313594650953 1.133417176264685 1.1545032153629684 1.0258407009287094 1.0059348983258432 1.0 13.106952019022467 -8.826444111895537 5.733340624648377 1.0114729124701953 1.129555669693995 0.5506071312612215 0.04705215227634382 0.1129489824194508 6.9985180318254825 0.008769496418024674 0.009333996646948107 1.4912686501673524e-09 8.826444111895537 0.11808275722379968 NDLQDTEIS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NDLQDTEISPR 11 0 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NDLQDTEIS(1)PR;NDLQDTEIS(1)PR 200.05 5.1331e-24 512100000.0 10042.2 10246.099999999999 9899.0 9405.7 13444.5 8879.599999999999 11712.400000000001 10251.5 9279.1 9469.4 9994.0 True False 11061.676751323092 11109.57480569107 10570.805667522705 9986.668727105427 12500.204701007073 8807.287481622 12158.121791271198 10047.025790353822 8889.131695939459 8871.500467942082 8764.80135718576 1.2620567541161964 1.267521573273645 1.2060519385138497 1.1394061679353324 1.4261823162436955 1.0048473573678207 1.3871531476641452 1.1462924692659282 1.014185186142498 1.0121735914378533 1.0 13.097505679212162 -8.631925103468854 3.692188155803575 1.0064177756991644 1.237337048789224 0.47559852027297544 0.10672591356642952 0.12751595549422567 3.345944886957084 0.016308041434085208 0.01848903229755601 2.333860514977146e-09 8.631925103468854 0.23091927309005955 NDNGASGQTSES(ph)IKKSEEK ddPTM_A549_MK2206_60min_R1 1 NDNGASGQTSESIKKSEEK 19 2 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 1 NDNGASGQTSES(0.771)IKKS(0.228)EEK 194.37 4.7326e-55 34834000.0 2865.1 3267.1 3503.0 3372.0 4219.4 3711.3 3785.5 4085.0 5229.9 4712.6 5253.9 True False 3348.6588350302927 3433.381435087626 3999.778074216233 4198.140151374833 3598.7318494053825 4104.027302638444 4473.276349694322 4664.061259787826 4045.336000434156 3648.020386957158 3949.211629736663 0.8479309667316016 0.8693840079966966 1.0128041870683293 1.0630324593809548 0.9112532289502422 1.0392016653997609 1.1327010981157786 1.1810107173463456 1.0243401417066886 0.9237338306938013 1.0 11.947348965448649 -5.761773651426013 4.172482904294607 1.0303524280017158 0.8526412885156891 0.44929797788280923 0.07438318976756603 0.1303794731499771 5.165704017121102 0.009928427167492364 0.03841967082806007 1.7307181517391772e-06 5.761773651426013 -0.17771113948602668 NDNGASGQTSESIKKS(ph)EEK ddPTM_A549_MK2206_60min_R1 1 NDNGASGQTSESIKKSEEK 19 2 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 1 NDNGASGQTSESIKKS(1)EEK 198.39 3.3114e-55 40478000.0 2246.8 3483.8 3326.1 3136.9 3978.7 3868.5 2700.0 3973.1 5058.9 4370.7 3576.5 True False 2626.004911013948 3661.1105394870933 3797.790994190868 3905.4406408207933 3393.4385005520194 4277.862102297528 3190.5550506339114 4536.2990921084465 3913.0672274032686 3383.355834417019 2688.356343621534 0.9768068571878417 1.3618397531910313 1.412681396646545 1.452724319856981 1.262272581015304 1.5912556058452956 1.1868051116824254 1.6873875752637446 1.455561215568582 1.2585220863463504 1.0 11.39250866574836 -10.730944478447679 1.0235664687341541 1.0035486307884607 1.387001510284178 0.14814068266293112 0.19647701211232102 0.4189539609013851 0.7911659096393417 0.11318909227067173 0.03033992947461347 1.858041977752536e-11 10.730944478447679 0.38345287949571727 NDNS(ph)SRFGK ddPTM_A549_MK2206_60min_R1 1 NDNSSRFGK 9 1 P35749-3;P35749-2;P35749;P35749-4;A0A2R8Y4C3;H0YMK3;A0A087WT71;J3QRN6;A0A140TA25;A0A6E1W127;J3KRL0;Q13402-8;A0A494C024;K7EIG7;A7E2Y1;Q9Y2K3;Q6PIF6-2;Q13402;Q13402-5;A0A087WYA1;I3L3Y6;Q9ULV0;Q13402-7;Q13402-6;Q6PIF6;P13535;P13533;Q9UKX3;P12883;Q9NQX4;Q13402-2;Q13402-4;Q13402-3;Q8N1T3;Q8N1T3-3;O94832;Q9UKX2-2;Q9NQX4-2;Q9UKN7;P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5;M0QY43;A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;O00159-3;F5H6E2;O00159-2;O00159;E9PDF6;O43795-2;O43795;E7EQD9;P11055;Q9UKX2;Q9Y623;P12882 P35749-3;P35579;P35580-2;P35580-5;Q7Z406;A0A087WY00;O00159-3;E9PDF6;P11055;Q9UKX2 MYH11;MYO5C;MYO7A;MYO1D;MYH7B;MYH15;MYO7B;MYO15A;MYO1C;MYO5B;MYH8;MYH6;MYH13;MYH7;MYO1H;MYH2;MYH9;MYH10;MYH14;MYO5A;MYO1B;MYH3;MYH4;MYH1 Myosin-11;Unconventional myosin-VIIa;Myosin-7B;Myosin-15;Unconventional myosin-VIIb;Unconventional myosin-Vb;Myosin-8;Myosin-6;Myosin-13;Myosin-7;Unconventional myosin-Vc;Unconventional myosin-Ih;Unconventional myosin-Id;Myosin-2;Unconventional myosin-XV;Myosin-9;Myosin-10;Myosin-14;Unconventional myosin-Va;Unconventional myosin-Ic;Unconventional myosin-Ib;Myosin-3;Myosin-4;Myosin-1 1 NDNS(0.5)S(0.5)RFGK 48.004 0.0092662 5856200.0 1460.1 2039.1 2009.2 1648.8 2768.1 1282.6 1844.7 1602.4 2856.9 2825.1 2773.5 True False 1706.5291839823149 2142.881480299708 2294.1347721139755 2052.756074017445 2360.9161568798972 1418.3238806790255 2179.8581118164357 1829.5451071441885 2209.8167115318365 2186.9079478828385 2084.763405294093 0.8185721121393046 1.0278775398963877 1.1004293179207771 0.9846470198031259 1.13246239399854 0.6803284617704356 1.0456141480039687 0.8775792507189076 1.059984411622048 1.0489957480687533 1.0 11.025667949686097 -8.813336551248584 24.999973352058152 1.0283259691943212 0.9657954239260973 0.06918624988735378 0.12419372376437185 243.94083769122523 117510.27304004085 0.020489887634535558 0.021813164260554463 1.5369631277283798e-09 8.813336551248584 -0.06253054526822388 NDNSS(ph)RFGK ddPTM_A549_MK2206_60min_R1 1 NDNSSRFGK 9 1 P35749-3;P35749-2;P35749;P35749-4;A0A2R8Y4C3;H0YMK3;A0A087WT71;J3QRN6;A0A140TA25;A0A6E1W127;J3KRL0;Q13402-8;A0A494C024;K7EIG7;A7E2Y1;Q9Y2K3;Q6PIF6-2;Q13402;Q13402-5;A0A087WYA1;I3L3Y6;Q9ULV0;Q13402-7;Q13402-6;Q6PIF6;P13535;P13533;Q9UKX3;P12883;Q9NQX4;Q13402-2;Q13402-4;Q13402-3;Q8N1T3;Q8N1T3-3;O94832;Q9UKX2-2;Q9NQX4-2;Q9UKN7;P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5;M0QY43;A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;O00159-3;F5H6E2;O00159-2;O00159;E9PDF6;O43795-2;O43795;E7EQD9;P11055;Q9UKX2;Q9Y623;P12882 P35749-3;P35579;P35580-2;P35580-5;Q7Z406;A0A087WY00;O00159-3;E9PDF6;P11055;Q9UKX2 MYH11;MYO5C;MYO7A;MYO1D;MYH7B;MYH15;MYO7B;MYO15A;MYO1C;MYO5B;MYH8;MYH6;MYH13;MYH7;MYO1H;MYH2;MYH9;MYH10;MYH14;MYO5A;MYO1B;MYH3;MYH4;MYH1 Myosin-11;Unconventional myosin-VIIa;Myosin-7B;Myosin-15;Unconventional myosin-VIIb;Unconventional myosin-Vb;Myosin-8;Myosin-6;Myosin-13;Myosin-7;Unconventional myosin-Vc;Unconventional myosin-Ih;Unconventional myosin-Id;Myosin-2;Unconventional myosin-XV;Myosin-9;Myosin-10;Myosin-14;Unconventional myosin-Va;Unconventional myosin-Ic;Unconventional myosin-Ib;Myosin-3;Myosin-4;Myosin-1 1 NDNS(0.122)S(0.878)RFGK 46.592 0.01009 5132900.0 2190.8 2515.9 2632.3 2024.5 2870.4 2759.1 2115.2 2010.6 3163.9 3070.3 3569.2 True False 2560.553480082498 2643.9485637222497 3005.599721598457 2520.5025908832577 2448.167962395888 3051.066130657649 2499.504460407721 2295.608707204259 2447.2817017100974 2376.7170975840404 2682.8691350912854 0.9544086390912893 0.9854929296177871 1.12029307814009 0.9394802593669918 0.9125185907782224 1.1372400132195921 0.9316535151546536 0.8556543728422111 0.9121882501461734 0.88588633209766 1.0 11.389560969242128 NDQEPPPEALDFS(ph)DDEKEK ddPTM_A549_MK2206_60min_R1 2 NDQEPPPEALDFSDDEKEK 19 1 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 NDQEPPPEALDFS(1)DDEKEK;NDQEPPPEALDFS(1)DDEKEK 247.73 5.5108e-87 190302000.0 28205.0 36273.0 35998.0 32519.0 50911.0 45946.0 38266.0 47558.0 52179.0 45181.0 43966.0 True False 32965.31445395603 38119.14076549033 41103.05769786925 40486.156459833386 43422.05934139387 50807.97522351358 45218.43687687308 54299.49214026669 40360.539812740964 34974.580720432714 33048.02880012982 0.9974971473586509 1.153446730394419 1.243737045451491 1.2250702365544521 1.3139076948886979 1.5373980557446743 1.368264266239548 1.6430478340678942 1.221269203583556 1.0582955168659054 1.0 15.01227660211182 -9.830536116076653 1.1864479345391357 1.0394248955944272 1.3072659907198134 0.27512365736633326 0.1681293290655591 0.3909334390773075 1.1156814988894765 0.053004012918866826 0.03388714883229828 1.477283625073169e-10 9.830536116076653 0.26784109512538623 NDQEPPPEALDFS(ph)DDEKEK ddPTM_A549_PD325901_60min_R1 2 NDQEPPPEALDFSDDEKEK 19 1 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 NDQEPPPEALDFS(1)DDEKEK;NDQEPPPEALDFS(1)DDEKEK 203.66 1.9699e-55 398830000.0 14714.5 13912.5 16044.7 14531.2 19207.5 13754.099999999999 16326.1 15509.8 16432.0 15324.5 17322.7 True False 16208.305207757629 15084.955200922992 17133.589826618998 15428.75922125035 17858.431462277775 13642.091169757317 16947.39866948471 15200.444871797274 15741.420183819251 14356.90845470447 15192.117717642759 1.0668891269144631 0.9929461765165684 1.127794698873455 1.0155765975491868 1.175506390497396 0.8979716602587025 1.1155389251495549 1.0005481233300901 1.03615707015873 0.9450235129518281 1.0 13.891035369059546 -7.252143144271496 24.998462583221038 1.0168560497819665 1.0706920137164349 0.2077854569457469 0.06960779074585745 945.4419845499397 2542382.7162576257 0.008686750686569994 0.014913129951220057 5.595731347472826e-08 7.252143144271496 0.05383596393446832 NDQEPPPEALDFS(ph)DDEKEKEAK ddPTM_A549_MK2206_60min_R1 4 NDQEPPPEALDFSDDEKEKEAK 22 2 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 NDQEPPPEALDFS(1)DDEKEKEAK;NDQEPPPEALDFS(1)DDEKEKEAK;NDQEPPPEALDFS(1)DDEKEKEAK;NDQEPPPEALDFS(1)DDEKEKEAK 218.61 2.3567999999999996e-74 335215000.0 15441.599999999999 16622.1 15309.099999999999 18904.3 25963.0 17856.7 18866.1 18698.2 27848.5 26932.399999999998 27617.7 True False 18047.764569126302 17468.09389127055 17480.160581211465 23535.854348646273 22143.877092978135 19746.284141681852 22293.82616324609 21348.727110835913 21540.85921491629 20848.352134635854 20759.462880256244 0.8693753144399048 0.8414521123224231 0.8420333744682945 1.1337410069039204 1.0666883445254536 0.9511943664237095 1.073911511672546 1.0283853312572986 1.0376404890226332 1.004281866775279 1.0 14.341481496173216 -6.23989471036508 24.965925044014682 1.0278476790349702 0.8500034184237052 0.7675866979548114 0.045385773770699134 286.0868604348151 331516.51717361005 0.006187217999073686 0.016352931420394037 5.755794629550254e-07 6.23989471036508 -0.17784426061126501 NDQEPPPEALDFS(ph)DDEKEKEAK ddPTM_A549_PD325901_60min_R1 3 NDQEPPPEALDFSDDEKEKEAK 22 2 Q96HR8-2;Q96HR8 Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 1 NDQEPPPEALDFS(1)DDEKEKEAK;NDQEPPPEALDFS(1)DDEKEKEAK;NDQEPPPEALDFS(1)DDEKEKEAK 207.88 1.2062999999999998e-73 770983000.0 19988.5 15890.900000000001 17288.4 19955.3 26400.4 24083.6 24944.6 25717.8 25201.0 23489.1 25395.4 True False 22017.717805244018 17230.081912118396 18461.69478759466 21187.893559225486 24546.12698043567 23887.471146492142 25893.880403208885 25204.838303776192 24141.8896088382 22005.994217325107 22271.926794704355 0.9885861249543627 0.7736233183118773 0.8289222103578545 0.9513273707537229 1.102110616952641 1.0725372513424352 1.1626241699647526 1.13168647401307 1.0839605316311685 0.9880597408643387 1.0 14.44293875388166 -6.537587749916199 3.780346681286663 1.0629440083647101 0.8569683695082011 0.6526549495329111 0.06860378416948702 0.11040518041357418 3.461023038302557 0.010282077458200497 0.0234080195211471 2.9000951704798546e-07 6.537587749916199 -0.20597563885650905 NDREYDS(ph)GDT(ph)DEIIAMK ddPTM_A549_PD325901_60min_R1 1 NDREYDSGDTDEIIAMK 17 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4;F5GWN9 F8WE42 NOL8 Nucleolar protein 8 2 NDREY(0.004)DS(0.997)GDT(0.999)DEIIAMK 57.82899999999999 0.0034876999999999994 10742000.0 2788.7 2875.3 3124.7 3183.5 3716.4 3111.7 3250.3 2801.4 2812.4 3508.2 3510.8 True False 3071.8067710675655 3117.6116218662282 3336.7609323475294 3380.1375647469254 3455.3728848839814 3086.359346880846 3373.9919451324054 2745.5238793442145 2694.2046083844507 3286.6916532868413 3078.9938567948548 0.9976657680847825 1.012542332614971 1.0837179570799802 1.097805881388004 1.1222409155700384 1.0023921743363458 1.0958098983167948 0.8916951468692526 0.8750276011232583 1.0674563854791819 1.0 11.588243273584135 -8.259210884723032 24.989930485024654 0.9356395560817056 1.0598163105252583 0.3497849225292061 0.0630474463730324 126.91001493307111 1423146.0671689725 0.009849749178068294 0.012410726096388191 5.505403001197913e-09 8.259210884723032 0.1241767544435527 NDS(ph)EEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR ddPTM_A549_PD325901_60min_R1 2 NDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR 36 2 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 NDS(1)EEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR;NDS(1)EEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR 68.63600000000001 8.1438e-05 15626800.0 317.99 339.81 369.7 473.14 402.72 477.9 682.98 572.46 579.26 406.67 682.03 True False 350.2721107081345 368.44698126329894 394.79006518669974 502.3647832210959 374.4343365085774 474.0081408472399 708.9711776409962 561.0418362138176 554.9157166309116 380.9927867972634 598.1446337443874 0.585597681476184 0.6159830925119558 0.6600244203735686 0.839871754890269 0.6259929712394429 0.7924640866205676 1.1852838555164062 0.9379701907575327 0.9277283207526871 0.6369576274758955 1.0 9.224350565763395 -7.531193346359446 24.228091184531646 0.9779259011932332 0.675837286749513 0.46236036026626093 0.13659087112448587 51.18729935789205 149155.17534482878 0.013715137034778438 0.020364239964223634 2.943111079503383e-08 7.531193346359446 -0.30208861444372015 NDS(ph)GEENVPLDLTR ddPTM_A549_MK2206_60min_R1 2 NDSGEENVPLDLTR 14 0 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NDS(1)GEENVPLDLTR;NDS(1)GEENVPLDLTR 239.7 1.9149e-57 23731000.0 2726.6 2891.0 3456.8 2713.76 4833.0 3776.3999999999996 4504.4 4961.5 5749.8 4387.8 4720.0 True False 3186.7834210301926 3038.1395515406116 3947.02621951204 3378.6313218253163 4122.072102236386 4176.016141428557 5322.791174101998 5664.807818956494 4447.47948054386 3396.592932540552 3547.8937346270504 0.8982183964326605 0.8563220261894278 1.1124984327995793 0.9522921413486115 1.1618364050775867 1.177040930135844 1.5002679257701956 1.5966678380664552 1.2535548731736106 0.957354753720547 1.0 11.79274708380995 -6.797666162322169 2.7676908058419945 1.197438807987523 0.9529576821696393 0.3277234942231584 0.18835022965818693 0.33242475390363235 5.202761078020465 0.03168741594983209 0.06718403414948583 1.5934331119626615e-07 6.797666162322169 -0.24448112581788362 NDS(ph)GEENVPLDLTR ddPTM_A549_PD325901_60min_R1 2 NDSGEENVPLDLTR 14 0 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NDS(1)GEENVPLDLTR;NDS(1)GEENVPLDLTR 270.73 7.298899999999998e-84 29408000.0 8469.1 7758.7 7836.200000000001 8526.099999999999 8828.0 7670.1 8240.5 7648.5 9738.9 8198.2 7468.5 True False 9328.876797378103 8412.55287816002 8368.011654898619 9052.73783282197 8207.951734946666 7607.637248613551 8554.096736874624 7495.944667367822 9329.607900937037 7680.564252886436 6549.921846722222 1.4242729937375596 1.2843745429374727 1.277574275040583 1.3821138701604863 1.2531373544638815 1.1614851942730646 1.305984550205794 1.1444326883257423 1.4243846139333485 1.1726192209041428 1.0 12.67726197726348 -10.962790162589165 1.1734103522106516 0.9966081821978063 1.3006210585393838 0.3556107269107365 0.09985247326691435 0.2716517371367368 0.6526235829240694 0.06801205237995277 0.015042908712318788 1.0894563571736691e-11 10.962790162589165 0.3040128763415775 NDS(ph)GEENVPLDLTREPSDNLR ddPTM_A549_MK2206_60min_R1 1 NDSGEENVPLDLTREPSDNLR 21 1 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NDS(1)GEENVPLDLTREPSDNLR 220.55 7.592699999999998e-69 11532000.0 1979.2 2862.9 2661.7 2168.8 4219.6 2787.5 2523.3 3065.0 4608.0 3485.1 3826.4 True False 2313.2405732058064 3008.6093815654162 3039.169083682942 2700.156097361133 3598.90242967032 3082.4713998072543 2981.750947875757 3499.4731361688305 3564.2953574639278 2697.8134894929285 2876.1992767324014 0.804269923825945 1.0460364849905128 1.0566615144746465 0.9387931216048188 1.2512701949355083 1.0717169094448822 1.0366983164196018 1.2167005132358282 1.2392379715473887 0.9379786412288742 1.0 11.489947920659688 -4.38092126277338 0.7528139181622744 1.117417166341942 8.517507316158074e-13 0.3344032703709011 0.10789645152642255 6.7884658056387375 1.0425450036511075 0.017439430828594105 8.772492225216332 4.159860215758961e-05 4.38092126277338 -1.1174171663410903 NDS(ph)GEENVPLDLTREPSDNLR ddPTM_A549_PD325901_60min_R1 2 NDSGEENVPLDLTREPSDNLR 21 1 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NDS(1)GEENVPLDLTREPSDNLR;NDS(1)GEENVPLDLTREPSDNLR 214.3 7.8534e-68 33556000.0 4935.7 5256.8 5490.6 6140.1 7138.0 6814.4 6221.4 6948.299999999999 7633.1 6534.1 5952.0 True False 5436.768630529701 5699.808984741203 5863.225133659978 6519.360031821137 6636.651504763177 6758.90578570712 6458.158781480711 6809.710705664094 7312.307351820273 6121.535810883519 5219.941732836666 1.0415381835258926 1.0919296184641056 1.1232357435671478 1.2489334872859452 1.2714033689331299 1.2948239906950334 1.23720897895371 1.3045568426227436 1.4008407997777697 1.1727211000029498 1.0 12.349817987584306 -6.020895631825696 2.728587734988325 1.2212089848765928 1.0658403753858914 0.33721432430046727 0.09587284855779794 0.41214048626020594 6.076159688870201 0.020985867154588587 0.07351584107392362 9.530251642756872e-07 6.020895631825696 -0.15536860949070141 NDS(ph)LPVLR ddPTM_A549_MK2206_60min_R1 2 NDSLPVLR 8 0 Q9GZY8-5 Q9GZY8-5 MFF Mitochondrial fission factor 1 NDS(1)LPVLR;NDS(1)LPVLR 58.592 0.014287000000000001 24491000.0 2302.9 2444.5 2667.1000000000004 2540.7 3487.8 3074.5 2586.8999999999996 2864.6000000000004 3980.6000000000004 4209.5 4362.7 True False 2691.573219500635 2568.9146086963055 3045.334884882133 3163.1716140563567 2974.749240260723 3399.8415493120706 3056.906244624022 3270.6658224695702 3079.0004557120033 3258.5710263752794 3279.3211856053877 0.8207714545666712 0.7833677957415642 0.9286479464865046 0.9645812151432831 0.9071234782730079 1.0367516192789252 0.9321765303265632 0.9973606235419055 0.9389139646422271 0.993672422414373 1.0 11.679181494775909 -5.869989054867494 3.7814633554490156 0.9689164694806622 0.8012943381063578 0.7634206296554005 0.03581325476613376 0.073788063395511 1.9682421937352024 0.004877606871681743 0.017323881039114974 1.348996879716097e-06 5.869989054867494 -0.16762213137430448 NDS(ph)LPVLR ddPTM_A549_PD325901_60min_R1 2 NDSLPVLR 8 0 Q9GZY8-5 Q9GZY8-5 MFF Mitochondrial fission factor 1 NDS(1)LPVLR;NDS(1)LPVLR 98.73700000000001 0.0024272 41535000.0 4725.6 5838.7 5267.9 5149.9 6440.6 5439.299999999999 5441.1 5908.2 6487.1 5642.4 6659.2 True False 5205.339433197146 6330.747739919431 5625.411372456092 5467.997626728497 5988.234474863787 5395.004144194165 5648.164037984164 5790.356316106764 6214.4697464979245 5286.13790106199 5840.160616146834 0.8913007321760057 1.0840023341851635 0.9632288805384898 0.9362752133238624 1.0253544154774714 0.9237766730726713 0.9671247777617896 0.9914721009722965 1.064092266455173 0.9051357057624261 1.0 12.511792331324248 -8.567796889115115 7.4119274370342625 1.0302408223321622 0.9736981448697171 0.0 0.06280152581002232 0.2494337765767621 33.99196540529413 0.008325964381426286 0.009461096505283135 2.7052232473728104e-09 8.567796889115115 -0.05654267746244512 NDS(ph)LSSLDFDDDDVDLSR ddPTM_A549_PD325901_60min_R1 1 NDSLSSLDFDDDDVDLSR 18 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 NDS(0.333)LS(0.333)S(0.333)LDFDDDDVDLSR 51.606 0.015856 2922000.0 247.18 204.16 261.73 193.34 232.01 327.52 201.2 391.44 244.87 275.56 242.27 True False 272.2735316357016 221.36527969958235 279.4925717103461 205.2821726930015 215.7144179910485 324.8527857089098 208.85677610086455 383.6324221212606 234.57896545836297 258.16109457263633 212.4723258760651 1.2814540929651164 1.0418546452430915 1.3154304710410798 0.9661595779430702 1.0152588912537932 1.5289181043671358 0.9829834320291223 1.8055641860156086 1.1040447949686993 1.2150339744632035 1.0 7.731131134924602 -8.98563552506129 24.92408703516877 1.0459017995900588 1.2366588077241905 0.046007540750935716 0.2472541387741955 120.22623000440795 208611.31015839256 0.040973846858088483 0.0412583439601955 1.0336284986222654e-09 8.98563552506129 0.19075700813413166 NDS(ph)LVTPSPQQAR ddPTM_A549_MK2206_60min_R1 1 NDSLVTPSPQQAR 13 0 A0A0A0MS29;Q9GZY8-2;H7C433;E9PQX8 A0A0A0MS29 MFF Mitochondrial fission factor 1 NDS(0.963)LVT(0.021)PS(0.017)PQQAR 84.84200000000001 0.00034577 7549300.0 3454.9 4977.1 3188.7 2801.0 4144.8 3671.0 2648.8 3641.4 4652.4 4392.7 5045.9 True False 4038.002655804742 5230.413131087089 3640.905608122553 3487.245125741666 3535.1054105833605 4059.4627833874165 3130.0526733774445 4157.579601319798 3598.6388283561573 3400.3860191373533 3792.863770244622 1.0646316083069627 1.3790142351328774 0.9599357711410056 0.9194227203991444 0.9320412291937821 1.0702896358245948 0.8252478504324374 1.0961584315093007 0.9487920068703289 0.8965220543415521 1.0 11.889071839388878 -5.784489085667229 24.999009372962455 0.9721783510467272 1.2218229213223946 0.506071341588339 0.09889966845232527 102.21804072291057 110862.71082409556 0.011390796210285228 0.03544784104086292 1.6425209376451934e-06 5.784489085667229 0.24964457027566733 NDS(ph)LVTPSPQQAR ddPTM_A549_PD325901_60min_R1 2 NDSLVTPSPQQAR 13 0 A0A0A0MS29;Q9GZY8-2;H7C433;E9PQX8 A0A0A0MS29 MFF Mitochondrial fission factor 1 NDS(0.824)LVT(0.174)PS(0.002)PQQAR;NDS(0.678)LVT(0.117)PS(0.205)PQQAR 128.85 4.9584e-08 24153000.0 18659.7 19903.2 19779.5 19960.1 23266.0 18070.0 19043.2 17747.3 19637.3 22033.0 20725.7 True False 20554.019007454892 21580.51251428648 21121.855813795864 21192.99004432388 21631.87642334268 17922.843911089396 19767.89939683889 17393.316179012476 18812.01257155025 20641.832619824705 18176.57029103712 1.130797431988041 1.1872708750191365 1.1620374732746512 1.1659509855263597 1.1900967056480054 0.9860410200667595 1.087548370254781 0.956908586191815 1.034959415904026 1.1356285751005077 1.0 14.149792384862515 -7.259657973120859 24.999948781651437 1.0159420901156375 1.1679844343556878 0.637005513516055 0.04929544496228897 43.84921009816606 615371.0427675669 0.004628840987838349 0.007755413263449461 5.499738330362481e-08 7.259657973120859 0.15204234424005025 NDS(ph)PTQIPVSSDVCR ddPTM_A549_MK2206_60min_R1 2 NDSPTQIPVSSDVCR 15 0 Q8TC07-2;Q8TC07-3;Q8TC07 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 NDS(0.736)PT(0.264)QIPVSSDVCR;NDS(0.905)PT(0.095)QIPVSSDVCR 274.89 1.5902999999999998e-92 80536000.0 22104.7 26412.9 25167.4 23255.2 35852.0 29771.0 26968.0 29806.0 39214.0 35368.0 33961.0 True False 25835.4329519717 27757.203791382577 28736.515759357582 28952.725043965616 30578.218292857215 32921.3474596096 31867.73652055381 34031.091777046735 30332.091611890308 27378.3442358572 25527.546424082473 1.0120609526185709 1.0873431911653155 1.1257061404165265 1.1341757865398243 1.1978518336572284 1.2896400975125395 1.248366607238448 1.3331125213405581 1.1882102223218471 1.0725019859342495 1.0 14.639767259561813 -4.1894877473215875 16.22513507471188 1.133654361176464 1.1357444020632046 0.0 0.10573031442848568 0.0 0.0 0.01655024736323022 0.0 6.464162309765219e-05 4.1894877473215875 0.002090040886740585 NDS(ph)PTQIPVSSDVCR ddPTM_A549_PD325901_60min_R1 2 NDSPTQIPVSSDVCR 15 0 Q8TC07-2;Q8TC07-3;Q8TC07 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 NDS(0.61)PT(0.39)QIPVSSDVCR;NDS(0.936)PT(0.064)QIPVSSDVCR 130.98 2.5379e-09 6210500.0 3103.7 3236.8999999999996 3227.3 3301.1000000000004 4065.6000000000004 3150.7 2984.6000000000004 3200.3 3383.8999999999996 3759.4 3154.2 True False 3418.7853391768203 3509.684922901539 3446.3239853314503 3505.001449657946 3780.0462815585834 3125.0417438112554 3098.1805862357864 3136.4675059132187 3241.686450829233 3522.0308424167815 2766.2533961212066 1.235890155244123 1.2687503349558502 1.2458453698290355 1.2670572603987036 1.3664859072053557 1.129701909518895 1.1199916069077411 1.1338323200293654 1.1718689456919134 1.2732133821707416 1.0 11.433717601881945 -11.882475914247447 0.1310501449485571 0.6678408776065909 1.3533398356304238 0.0 0.09892515230788237 11.85146429317427 0.25248621130939847 1.4725365788763796 0.24391556080454255 1.3107627345893608e-12 11.882475914247447 0.6854989580238329 NDS(ph)WGSFDLR ddPTM_A549_MK2206_60min_R1 2 NDSWGSFDLR 10 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NDS(1)WGSFDLR;NDS(0.944)WGS(0.056)FDLR 224.8 5.486699999999999e-35 84454000.0 9637.199999999999 11735.3 8598.4 6135.200000000001 21942.8 17330.8 14439.5 15396.2 23940.4 19337.4 17697.5 True False 11263.723753081547 12332.576644480985 9817.782413171813 7638.324275419592 18715.043187451403 19164.733752746033 17062.970242084575 17578.658498885023 18517.93762496299 14969.067909592439 13302.722323847926 0.8467232103979916 0.9270716432509645 0.7380280647947808 0.5741925667144303 1.4068581401493103 1.4406625415603256 1.2826675492952007 1.3214331676585915 1.3920412058639828 1.1252635020996595 1.0 13.69943389454054 -6.764375117732598 24.999991599056038 1.2395455660667372 0.7802247157436626 0.7292742475526239 0.14799270669988845 42.46803963085777 361651.54706893995 0.027588590470145353 0.05379804843475448 1.7203819694766106e-07 6.764375117732598 -0.45932085032307457 NDS(ph)WGSFDLR ddPTM_A549_PD325901_60min_R1 3 NDSWGSFDLR 10 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NDS(0.984)WGS(0.016)FDLR;NDS(0.954)WGS(0.046)FDLR;NDS(0.959)WGS(0.041)FDLR 207.27 1.3348e-20 178767900.0 34305.69 27483.21 26654.17 28064.81 26923.15 31097.89 24863.49 22962.32 42413.33 33876.33 42147.89 True False 37788.37839428582 29799.31655903387 28463.082260744857 29798.30957389197 25032.16082382527 30844.639094312573 25809.683717773783 22504.318514008446 40630.845236428126 31737.37274242937 36963.9667274881 1.02230311678602 0.8061720425928673 0.7700223969625642 0.806144800247658 0.6772043976873892 0.8344515436265417 0.6982390149859247 0.6088177353885886 1.099201434087786 0.8586030004952906 1.0 15.173831965064226 -8.777030475182801 24.999142429146865 1.046845144835387 0.7754099691483123 0.3567201452522374 0.1168081671218754 117.5697352851726 188513.48903040832 0.01790689319093266 0.0190954184670109 1.6709733551529176e-09 8.777030475182801 -0.27143517568707476 NDSDLFGLGLEEAGPKES(ph)SEEGKEGK ddPTM_A549_PD325901_60min_R1 1 NDSDLFGLGLEEAGPKESSEEGKEGK 26 2 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 1 NDSDLFGLGLEEAGPKES(0.862)S(0.138)EEGKEGK 129.46 2.0423e-24 7655800.0 3590.2 3461.4 4576.6 4496.3 4532.8 3091.2 3831.5 4959.0 3077.0 4198.3 3714.3 True False 3954.6744610344513 3753.1043257843585 4887.195597331484 4774.026239161802 4214.431765311084 3066.0262920840923 3977.30982917725 4860.088854739759 2947.6843905557353 3933.2186215136376 3257.464646887641 1.214034499135075 1.1521550446818445 1.5003065657215888 1.4655650196305787 1.293776670558123 0.9412308726093285 1.2209832677623649 1.4919851423048758 0.9049014218380278 1.2074478307144942 1.0 11.66953380603826 -8.780330388535695 24.999684730606074 0.9550922994925659 1.2804709706587853 0.25243401356422035 0.1745705094355781 158.32546653217995 209521.4214295 0.02862037983220656 0.030492875678275504 1.6583248605967447e-09 8.780330388535695 0.32537867116621944 NDSDPTY(ph)GQQGHPNTWK ddPTM_A549_MK2206_60min_R1 1 NDSDPTYGQQGHPNTWK 17 0 C9JXK9;C9JUT4;A0A087WZF1;Q93052 C9JXK9 LPP Lipoma-preferred partner 1 NDS(0.003)DPT(0.216)Y(0.781)GQQGHPNTWK 80.316 0.00011437 6205700.0 3178.1 3506.3 2783.2 2772.3 4280.2 2975.7 2798.0 2627.3 4750.4 4947.4 4473.3 True False 3714.485582915005 3684.755693381819 3177.8996106647487 3451.5136244532746 3650.588249946654 3290.5865988902024 3306.3603821013658 2999.727820768799 3674.44198483 3829.7789038814735 3362.4561532006733 1.1046941324065267 1.0958524142759016 0.9451125801714179 1.0264858386830795 1.0856909603034413 0.9786258761346049 0.9833170252507499 0.8921239962975879 1.0927851003595548 1.1389825560211284 1.0 11.715299739551456 -5.564880945244892 24.81244151472793 1.0227646347351282 1.102483883534143 0.18527973722186908 0.06708699666197955 139.60563064902237 82470.51270710373 0.008614098038127887 0.03336233617539078 2.723447794587249e-06 5.564880945244892 0.07971924879901482 NDSLS(ph)SLDFDDDDVDLSR ddPTM_A549_PD325901_60min_R1 2 NDSLSSLDFDDDDVDLSR 18 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 NDS(0.272)LS(0.364)S(0.364)LDFDDDDVDLSR;NDS(0.269)LS(0.366)S(0.366)LDFDDDDVDLSR 103.63 6.2891000000000005e-09 2519800.0 218.09 301.27 456.0 288.91 337.24 0.0 309.86 257.76 258.49 226.35 230.56 True False 240.23033625062757 326.659080207157 486.94690215075764 306.75531453778353 313.55342581484075 0.0 321.65189186189787 252.61877459119165 247.62656422318884 212.0582223708673 202.20258164025913 1.1880676018173895 1.6155040037437296 2.408213081161794 1.5170692285399963 1.5506895276574022 0.0 1.5907407771585842 1.2493350606206826 1.2246459081503915 1.0487414188813002 1.0 7.659657606876298 -7.019445429421853 24.967771656218464 1.079092388982309 1.7048775285898923 0.32395710447615456 0.4561302269284509 690.4314594213664 886508.3952648771 0.06399543821355823 0.11193093661632332 9.562128388655094e-08 7.019445429421853 0.6257851396075833 NDSLVT(ph)PS(ph)PQQAR ddPTM_A549_PD325901_60min_R1 2 NDSLVTPSPQQAR 13 0 A0A0A0MS29;Q9GZY8-2;H7C433;E9PQX8 A0A0A0MS29 MFF Mitochondrial fission factor 2 NDS(0.284)LVT(0.736)PS(0.979)PQQAR;NDS(0.341)LVT(0.73)PS(0.929)PQQAR 58.32 0.017878 2402000.0 964.8000000000001 990.46 1231.9 1147.03 1541.25 1435.93 1380.9 1607.69 1560.27 1100.58 1459.63 True False 1062.745785751779 1073.9295402196726 1315.5041420164873 1217.8794380058632 1432.9979170238498 1424.2362621610741 1433.4509051574746 1575.6233617415928 1494.6972778850813 1031.0891909738423 1280.1047633569194 0.8302021960803092 0.8389387891998954 1.0276535012390215 0.9513904430853942 1.1194380007351794 1.1125935180697144 1.1197918687517603 1.2308550103428346 1.1676366815208306 0.80547250544552 1.0 10.322046169411298 -5.918300973309703 1.0244081645048864 1.0996306173543646 0.7876261344743678 0.37041243549955805 0.11083945173650023 0.4453296922534911 0.6576103434283221 0.01282836128651926 0.11750451701697857 1.2069770899739727e-06 5.918300973309703 -0.3120044828799968 NDSPT(ph)QIPVSSDVCR ddPTM_A549_MK2206_60min_R1 2 NDSPTQIPVSSDVCR 15 0 Q8TC07-2;Q8TC07-3;Q8TC07 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 NDS(0.471)PT(0.529)QIPVSSDVCR;NDS(0.207)PT(0.793)QIPVSSDVCR 152.94 1.7115e-14 11093600.0 3283.9 3765.9 4013.8 4010.9 5548.6 3985.3 3733.9 4156.0 5828.0 5488.5 6153.8 True False 3838.142036353352 3957.5682245405674 4583.017195058272 4993.570680056146 4732.408290185977 4407.021800771963 4412.301297615543 4745.125727216205 4507.967305403597 4248.644038071203 4625.641623760156 0.8297534371530818 0.8555717339216358 0.9907851856739314 1.0795411936813433 1.0230814825509615 0.952737405797884 0.9538787602894342 1.0258308172518822 0.9745604333565074 0.9184983151845443 1.0 12.17543778071572 -5.73947169217686 4.9831920205865945 0.9944606056672195 0.8379613994737518 0.6583813900437154 0.041279051374474476 0.0663619200576535 4.218771217723286 0.004917548199952717 0.018965195529948343 1.821915823829585e-06 5.73947169217686 -0.1564992061934677 NDSVIVADQTPT(ph)PTR ddPTM_A549_MK2206_60min_R1 2 NDSVIVADQTPTPTR 15 0 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336-3;P15336-7;P15336-5;P15336 E9PEK8 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 NDSVIVADQT(0.003)PT(0.989)PT(0.008)R;NDSVIVADQT(0.002)PT(0.988)PT(0.01)R 194.37 2.5553e-38 28690000.0 5144.3 7164.200000000001 5445.8 6364.3 8190.099999999999 6931.2 6220.1 5915.4 9324.6 8258.8 8554.7 True False 6012.532073940297 7528.827179227692 6218.096327880893 7923.553785704287 6985.347139359866 7664.654983441806 7350.211655721481 6753.926065152729 7212.592988326425 6393.13134401429 6430.331892291102 0.9350267100751553 1.1708302627821594 0.9669946173906445 1.232215369039242 1.0863120685472136 1.1919532477989903 1.1430532325295935 1.0503230903601668 1.1216517450635983 0.9942148323134908 1.0 12.650677486757376 -10.781232394270617 0.8384516279872326 0.9942560778678716 1.1053136213072694 0.17172875824647793 0.08595299309452799 0.9526732993488294 1.084991439516961 0.07018034980945533 0.014389463270877033 1.6548841854204187e-11 10.781232394270617 0.11105754343939778 NDSVIVADQTPT(ph)PTR ddPTM_A549_PD325901_60min_R1 2 NDSVIVADQTPTPTR 15 0 E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336-3;P15336-7;P15336-5;P15336 E9PEK8 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 NDSVIVADQTPT(0.992)PT(0.007)R;NDSVIVADQT(0.001)PT(0.981)PT(0.018)R 221.24 6.654299999999999e-54 54458000.0 10903.3 12950.400000000001 11595.5 11951.900000000001 13315.1 12316.4 11769.6 12138.3 12726.7 12292.8 15669.900000000001 True False 12010.194989414777 14041.775657432749 12382.440359405942 12690.14171826567 12379.893310601312 12216.099321889398 12217.498568572248 11896.192084187862 12191.84105729141 11516.63051009763 13742.60163968033 0.8739389603447858 1.021769823909367 0.9010259253715786 0.9234162534133427 0.9008405857341932 0.8889218826380505 0.8890237008177181 0.865643376421452 0.8871566954315797 0.8380240373732845 1.0 13.74636752907397 -10.76694527188783 1.036568271022526 0.9995479698502304 0.9065367806579107 0.0 0.06185258751228781 0.4033362990313602 0.7754354429858544 0.02696892541858067 0.006981206752166536 1.7102308181896654e-11 10.76694527188783 -0.09301118919231977 NDSWGS(ph)FDLR ddPTM_A549_MK2206_60min_R1 1 NDSWGSFDLR 10 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NDS(0.117)WGS(0.883)FDLR 53.528 0.021 1036900.0 753.98 904.64 655.47 572.53 1314.5 844.02 651.14 783.3 1027.7 912.61 1086.4 True False 881.2333909588286 950.6823119701477 748.4255022285223 712.7998757018484 1121.1387913076207 933.3336361848675 769.4437095073202 894.3351737556428 794.9275908996699 706.4507671648286 816.6168968853442 1.0791270598489182 1.1641717378077063 0.9164952440772283 0.8728693692483416 1.3729066782523758 1.1429271666367573 0.9422333929680526 1.0951710369534644 0.9734400475077121 0.8650944768095052 1.0 9.673515608918114 -7.76204855385332 24.999999522457696 0.9938478455030386 1.0896333990346938 0.15203222324723797 0.13337439056695363 28.648895989672127 1175760.1067013806 0.019863511161112724 0.028355827008554796 1.729622977630769e-08 7.76204855385332 0.09578555353165519 NDSWGS(ph)FDLR ddPTM_A549_PD325901_60min_R1 2 NDSWGSFDLR 10 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NDS(0.001)WGS(0.999)FDLR;NDS(0.066)WGS(0.934)FDLR 96.229 0.00054071 2497840.0 1535.51 1350.1399999999999 1172.66 1235.75 1567.79 1546.24 1517.13 1343.01 1688.85 1335.6399999999999 2058.8 True False 1691.3938448172826 1463.9210361167416 1252.2437593774284 1312.079470908124 1457.6738389818795 1533.6479340942371 1574.865212355391 1316.2226119790362 1617.8735076340758 1251.3074624582523 1805.5806518084896 0.9367589551445202 0.8107757660398399 0.6935407499649308 0.7266800680401236 0.8073158280256588 0.8493932035426489 0.8722209172866293 0.7289746988929533 0.8960405651298909 0.6930221927250543 1.0 10.818247148795447 -9.42965924303268 0.6460105483157679 0.991879758212148 0.7942665198065976 0.0 0.11296223215607462 0.3665253795746144 0.3379805714416114 0.029000588154829806 0.018079196214371967 3.7182685817380076e-10 9.42965924303268 -0.19761323840555045 NDTEEESNKS(ph)ATTDNEISR ddPTM_A549_MK2206_60min_R1 2 NDTEEESNKSATTDNEISR 19 1 F8W8C2;Q9HBM0 F8W8C2 VEZT Vezatin 1 NDT(0.016)EEES(0.194)NKS(0.619)AT(0.077)T(0.094)DNEISR;NDT(0.016)EEES(0.044)NKS(0.816)AT(0.057)T(0.066)DNEIS(0.001)R 48.286 0.00525 5904600.0 1435.13 2288.5 1773.4699999999998 1478.92 2389.3 2047.16 1851.59 1895.26 2644.3 2654.6 2159.7 True False 1677.344858440203 2404.9748750261806 2024.9747134685313 1841.2554663912408 2037.8371350865723 2263.7891124051725 2187.9999356308294 2163.918908990323 2045.3702720793992 2054.9240163002296 1623.3868853122956 1.0332379013383044 1.4814551582160458 1.2473765383899729 1.1342061975799647 1.2552997400213368 1.3944852782087622 1.3477994404333984 1.332965621792641 1.2599401230754217 1.2658251923138568 1.0 10.66479114838417 -10.37569997438224 0.7739712457480643 1.0016286068840345 1.2838979735182579 0.02186559261827603 0.13800201012616342 0.4449856721441858 0.4902957386300433 0.07063784425278329 0.021979212443277524 4.2101738128020375e-11 10.37569997438224 0.2822693666342233 NDTEEESNKS(ph)ATTDNEISR ddPTM_A549_PD325901_60min_R1 2 NDTEEESNKSATTDNEISR 19 1 F8W8C2;Q9HBM0 F8W8C2 VEZT Vezatin 1 NDT(0.001)EEES(0.115)NKS(0.838)AT(0.023)T(0.023)DNEISR;NDT(0.001)EEES(0.02)NKS(0.967)AT(0.009)T(0.003)DNEISR 67.01 0.00047361 6062200.0 2424.1 2506.9 2548.0 2322.9 2824.8 2261.7 2300.3 2203.6 2473.2 1883.44 2432.6 True False 2670.1928474718984 2718.165260966314 2720.9226023687074 2466.3802573113335 2626.3957930309653 2243.281465064245 2387.8391752724606 2159.647469309243 2369.260004784675 1764.5192769701187 2133.4056215219225 1.2516104863204796 1.2740967931954905 1.2753892531827415 1.1560765718578516 1.2310813126841555 1.051502556491784 1.1192616871277534 1.012300449348493 1.110552996056371 0.82709038504893 1.0 11.058942574074333 -5.970615063897745 0.2659180361425247 1.0161926095998062 1.4417572392097138 0.6681441714152196 0.07678249302771806 2.174733862800687 0.15557583607509767 0.02829582674333535 0.29133433083252974 1.070002854072393e-06 5.970615063897745 0.4255646296099076 NDVDDEEVHGS(ph)SDDSK ddPTM_A549_MK2206_60min_R1 2 NDVDDEEVHGSSDDSK 16 0 Q03188;H0Y8J2 Q03188 CENPC Centromere protein C 1 NDVDDEEVHGS(0.841)S(0.159)DDSK;NDVDDEEVHGS(0.975)S(0.024)DDS(0.001)K 113.26 7.2443e-08 14167900.0 1376.74 1940.98 1763.15 1813.03 2221.4 1670.87 1239.23 2358.7 2354.0 2188.89 2368.6 True False 1609.1000539386432 2039.767591404113 2013.1911822878535 2257.2224313900097 1894.6350026707853 1847.6803543662586 1464.3820501470607 2693.0529482158 1820.8227585655577 1694.418228749873 1780.411249965599 0.9037799856464254 1.1456721538035246 1.1307450356353075 1.267809575699785 1.0641558250698502 1.0377829023502068 0.8224965160017695 1.5126016240729971 1.0226978506234106 0.9517004730129696 1.0 10.797994806616526 -8.965664023892593 24.999865961126368 1.010013208794084 1.1143465246888367 0.08455503019385902 0.17183625069477082 352.680506990367 256786.7348329927 0.02824198781584071 0.02992341771946618 1.0822708869754297e-09 8.965664023892593 0.10433331589475259 NDVDDEEVHGS(ph)SDDSK ddPTM_A549_PD325901_60min_R1 3 NDVDDEEVHGSSDDSK 16 0 Q03188;H0Y8J2 Q03188 CENPC Centromere protein C 1 NDVDDEEVHGS(0.878)S(0.122)DDSK;NDVDDEEVHGS(0.962)S(0.038)DDSK;NDVDDEEVHGS(0.496)S(0.496)DDS(0.007)K 117.48 4.4447999999999995e-08 15986300.0 2143.69 2126.54 3023.11 2749.13 3257.13 2919.04 3346.2999999999997 3199.1600000000003 3121.05 2949.8100000000004 2867.7400000000002 True False 2361.3158306988303 2305.7509888927775 3228.276424037229 2918.937516372768 3028.3604252884957 2895.268306044628 3473.6452776656224 3135.3502441075316 2989.883122243736 2763.5584931822777 2515.02616010165 0.938883208516365 0.9167900618574821 1.2835955646309267 1.1605992663928368 1.2041069287192219 1.1511881474535477 1.3811567182765319 1.2466471696583903 1.1888079613942837 1.0988189852747228 1.0 11.296357690996125 -5.738658411605234 24.822060631903046 1.1470687151615044 0.927836348230162 0.4596823590026369 0.10124208084192872 199.36448858897384 217223.0626705962 0.017241334148159322 0.06668039438259461 1.825330826895162e-06 5.738658411605234 -0.2192323669313424 NDVVEALTGS(ph)AASR ddPTM_A549_PD325901_60min_R1 1 NDVVEALTGSAASR 14 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 NDVVEALT(0.012)GS(0.987)AASR 100.58 3.1247e-05 4941700.0 2310.1 2345.9 2126.7 2282.6 2663.4 3064.1 2489.1 3051.6 2656.6 2599.1 3053.9 True False 2544.619651394262 2543.597225936766 2271.0306508860003 2423.5910178392737 2476.331972231192 3039.146985499116 2583.824062587784 2990.73344406611 2544.952340575355 2434.9923824348184 2678.28966026712 0.9500912799478431 0.949709534286549 0.8479406408414759 0.9049025031883804 0.9245945309680262 1.1347342412530563 0.9647291332671185 1.1166579509431511 0.9502154969756085 0.9091594604416178 1.0 11.387096282976428 -7.030239801868797 24.80257556259358 0.9978591766748361 0.9115673974704405 0.32422449185973135 0.06817048944576268 594.233577702521 487387.53319489205 0.009382759680173068 0.01626638973719562 9.327391334163723e-08 7.030239801868797 -0.08629177920439568 NDYDKS(ph)PIKPK ddPTM_A549_MK2206_60min_R1 2 NDYDKSPIKPK 11 2 Q9P2Q2 Q9P2Q2 FRMD4A FERM domain-containing protein 4A 1 NDY(0.019)DKS(0.981)PIKPK;NDY(0.09)DKS(0.91)PIKPK 56.482 0.0030948 11090800.0 4607.2 6337.700000000001 5651.5 7248.700000000001 7354.8 6757.0 4980.3 4549.7 9688.3 8653.0 7223.6 True False 5384.782724774555 6660.261859494616 6452.9676809686125 9024.631825406508 6272.918662844643 7472.021255066408 5885.15604395262 5194.6339078718875 7493.915519035974 6698.281290230501 5429.780758782191 0.9917127346376086 1.2266170873883315 1.1884398224608805 1.6620619185793024 1.1552802850646873 1.3761184082766278 1.0838662379570114 0.9566931223641076 1.380150663894712 1.2336191068850475 1.0 12.40667823138357 -7.7700876881908725 24.938432652958006 1.1572973507319642 1.2742313622798516 0.10645006001493074 0.18835465839278895 422.82404678753994 1219263.5012629398 0.03264424372741097 0.045483304903910324 1.697900795513312e-08 7.7700876881908725 0.1169340115478874 NDYDKS(ph)PIKPK ddPTM_A549_PD325901_60min_R1 2 NDYDKSPIKPK 11 2 Q9P2Q2 Q9P2Q2 FRMD4A FERM domain-containing protein 4A 1 NDYDKS(1)PIKPK;NDY(0.007)DKS(0.993)PIKPK 59.871 0.0028420999999999997 12835200.0 3493.88 3807.2 4253.6 5048.3 4543.6 4886.1 4345.9 4326.799999999999 5282.0 4712.9 4237.0 True False 3848.576125541486 4128.046105369563 4542.274874974699 5360.122025478844 4224.473210569059 4846.309221581291 4511.285602667732 4240.498579691066 5060.01590864979 4415.326689691455 3715.8758605559406 1.0357117056557674 1.1109214247948414 1.2223968306344655 1.442492221652664 1.1368714588697337 1.304217203008559 1.2140571353728669 1.141184134998696 1.3617289970211086 1.188233099108663 1.0 11.859486589840165 -11.033349776243218 1.3270570800616608 0.99999156964519 1.2361425718988015 0.050754939561004964 0.12423865878994267 0.3933376558172044 1.2343396259503288 0.08290145695165729 0.018613110798735094 9.260836648269306e-12 11.033349776243218 0.23615100225361152 NEALAALLR ddPTM_A549_PD325901_60min_R1 1 NEALAALLR 9 0 P13797-3;P13797;A0A0A0MSQ0;P13797-2 P13797-3 PLS3 Plastin-3 0 56.916000000000004 0.040379000000000005 861670.0 680.95 550.29 525.79 747.89 894.46 722.96 588.48 596.01 823.1 607.03 517.05 False True 750.079542711105 596.664869542923 561.4732712321205 794.0854667185728 831.6362153194826 717.0724534566236 610.8749284286118 584.1221129892001 788.5079694073531 568.7020222036117 453.4561278499999 1.6541391694660834 1.3158160909015117 1.2382085867805317 1.7511847738911814 1.8339948767757792 1.5813491304142793 1.3471533207082051 1.2881557379293451 1.7388848026951484 1.2541500429160246 1.0 8.824819165677338 -10.941189415072223 1.1221626944655532 0.9908941832449518 1.5373144203917233 0.3325569936136913 0.2091276148348954 0.37170979503744467 0.8084793220642413 0.16277674136191508 0.03554620577744007 1.1450134414156708e-11 10.941189415072223 0.5464202371467715 NEDEDSPNK ddPTM_A549_PD325901_60min_R1 1 NEDEDSPNK 9 0 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2 H7C2W9 RPL31 60S ribosomal protein L31 0 76.827 0.0054336 1188100.0 784.98 820.93 605.06 802.32 656.51 559.58 425.9 587.16 638.59 805.24 691.5 False True 864.6705917282661 890.1126521540856 646.1230101213541 851.8774841990745 610.3990024365467 555.0229660081575 442.1078575614226 575.4486331818908 611.7522830565442 754.3970089768823 606.4498837796635 1.4257906792549073 1.4677431325512182 1.0654186395328005 1.4046956013740126 1.0065118631605146 0.9152000533811784 0.729009716031292 0.9488807708156209 1.0087433428857036 1.2439560615877225 1.0 9.24424461762677 -6.80683565556543 6.923081606462701 0.9713913657533791 1.330143748752987 0.5775258037089455 0.14881314964322662 0.09532582898427133 11.169194372696591 0.01838529823824209 0.035215201459742856 1.560142775754466e-07 6.80683565556543 0.3587523829996079 NEDEEEEEEEKDEAEDLLGR ddPTM_A549_MK2206_60min_R1 2 NEDEEEEEEEKDEAEDLLGR 20 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 ; 63.302 0.0020271 2678100.0 706.36 1045.59 722.84 563.14 1564.72 1206.74 839.92 1204.83 1425.67 1370.21 1141.4099999999999 False True 825.5762991560496 1098.8060649240213 825.3495812636203 701.1093252803156 1334.5517607720508 1334.4364258308178 992.5225918994197 1375.618342137126 1102.7580213271697 1060.6786093478254 857.9663956865808 0.962247826146371 1.2807099094419783 0.9619835758289121 0.8171757411538927 1.555482554423459 1.555348126150029 1.1568315459548522 1.603347577542706 1.2853160996412876 1.2362705750252907 1.0 9.744777331991687 -6.739208085280942 24.999978087305593 1.2320048316995618 1.0220747572065847 0.27801970644807794 0.2185672453911693 390.55152534667707 439188.4834238903 0.03603135175410924 0.07495932216674138 1.8230220210778204e-07 6.739208085280942 -0.20993007449297707 NEDEEEEEEEKDEAEDLLGR ddPTM_A549_PD325901_60min_R1 1 NEDEEEEEEEKDEAEDLLGR 20 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 45.093999999999994 0.036631 1449400.0 527.66 415.22 490.15 347.95 550.82 492.71 582.03 398.23 463.95 497.33 504.19 False True 581.2276547572388 450.21204661471677 523.4145265113904 369.4420812482148 512.1323034258407 488.6975331174797 604.1794701490367 390.28699024460866 444.451794929585 465.9284989251314 442.1778263237433 1.3144658554897533 1.018169658930593 1.183719524931965 0.835505670466898 1.1582043986323272 1.1052058787761931 1.3663721565872524 0.8826471320134844 1.0051426563487984 1.0537129434979828 1.0 8.788482870616674 NEDEEEEEEEKDEAEDLLGRGS(ph)R ddPTM_A549_MK2206_60min_R1 1 NEDEEEEEEEKDEAEDLLGRGSR 23 2 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 NEDEEEEEEEKDEAEDLLGRGS(1)R 76.16199999999999 2.0751999999999997e-05 12892000.0 233.74 215.52 148.22 242.66 269.43 222.7 452.31 510.65 343.54 373.16 293.29 True False 273.1895976056616 226.48904743965153 169.23982476743655 302.1117108934214 229.79720391176278 246.26596618370417 534.4888722045274 583.0362013000374 265.7287385206505 288.86289682912457 220.4579986077898 1.2391911354129865 1.0273569063946344 0.7676737783895337 1.3703821716666278 1.0423627419415527 1.1170652357314943 2.424447629842728 2.644658869181243 1.2053485933771926 1.3102853997283712 1.0 7.784360011216714 -7.556388227108231 24.999946629011273 1.3497773120711214 1.0832848781911784 0.10769614754974677 0.5383090119800391 570.9239107603721 425939.11835299147 0.09719177251588344 0.14415905043416902 2.7772295202383988e-08 7.556388227108231 -0.26649243387994304 NEDEEEEEEEKDEAEDLLGRGS(ph)R ddPTM_A549_PD325901_60min_R1 4 NEDEEEEEEEKDEAEDLLGRGSR 23 2 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 NEDEEEEEEEKDEAEDLLGRGS(1)R;NEDEEEEEEEKDEAEDLLGRGS(1)R;NEDEEEEEEEKDEAEDLLGRGS(1)R;NEDEEEEEEEKDEAEDLLGRGS(1)R 78.991 2.4457e-05 47530500.0 2165.5699999999997 1822.4499999999998 2048.5 2369.61 2116.19 1998.0099999999998 2434.69 2140.44 2170.11 2103.05 2043.9299999999998 True False 2385.4170721916253 1976.034257388831 2187.5235286311986 2515.975427925228 1967.5561148591735 1981.7388689981044 2527.3434602634893 2097.7472450573023 2078.9078234608082 1970.2630640912425 1792.5395675397942 1.3307472344755755 1.1023657681938244 1.2203488102823348 1.403581529515874 1.097636085969128 1.105548186988129 1.4099233880411304 1.17026551772935 1.159755612153123 1.0991462056234376 1.0 10.807789249203447 -9.924973673513298 0.5620831262308372 0.9963134825142597 1.2323005561126548 0.26774913469731265 0.11058531598737602 0.656645327300975 0.4157609783205368 0.07048988283410863 0.026414825196385678 1.1885742754085332e-10 9.924973673513298 0.2359870735983951 NEDS(ph)GSETAYLENR ddPTM_A549_PD325901_60min_R1 2 NEDSGSETAYLENR 14 0 J3QT39;Q49A88-5;Q49A88 J3QT39 CCDC14 Coiled-coil domain-containing protein 14 1 NEDS(0.999)GS(0.001)ETAYLENR;NEDS(0.998)GS(0.002)ETAYLENR 178.02 1.0295e-42 12890000.0 2655.0 2439.3 2338.9 2323.9 2500.0 2464.7 2620.0 2806.9 3226.9 2461.5 2805.0 True False 2924.5336454923035 2644.8683717240942 2497.6318189482627 2467.4420250401677 2324.4086245317917 2444.6283003686794 2719.70553371901 2750.9141775295493 3091.284614847026 2306.080469917783 2460.002782360022 1.1888334706217814 1.0751485285665896 1.0152963390359018 1.0030240789699467 0.9448804859894723 0.9937502176413828 1.105570104725589 1.1182565309501151 1.2566183408465006 0.9374300250609584 1.0 11.26444423197243 -7.891485852004071 5.834156386474282 1.1237697129159234 1.032118675332578 0.0 0.09741863415780982 0.3300517270084398 15.96862106709332 0.016945507707179622 0.023534055514265687 1.2838495937139e-08 7.891485852004071 -0.09165103758334547 NEEDEGHS(ph)NS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 2 NEEDEGHS(0.983)NS(0.579)S(0.438)PR 65.71600000000001 0.0018482 6568500.0 241.46 258.56 163.14 212.36 227.32 348.38 293.03 98.275 254.13 249.34 127.94 True False 265.9728414465428 280.34975861639896 174.21166144051455 225.4769948954474 211.3538274114268 345.5429087850208 304.1814170021686 96.31482802975394 243.4497998608805 233.5966298473694 112.20419107848171 2.3704358891594963 2.498567619638264 1.552630608233354 2.0095238219554252 1.8836535906541534 3.079590035485656 2.7109630583175592 0.8583888632322665 2.169703266169429 2.081888631806803 1.0 6.809982754627098 -11.321920271004378 0.37435280458043896 0.32483824132874095 2.211617214623331 0.019486773353839304 0.6406934144977859 3.293220329491524 0.418879132978263 2.6203713023294055 0.1781692355802273 4.765184593674375e-12 11.321920271004378 1.88677897329459 NEEDEGHS(ph)NSSPR ddPTM_A549_MK2206_60min_R1 2 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHS(0.333)NS(0.333)S(0.333)PR;NEEDEGHS(0.8)NS(0.1)S(0.1)PR 52.823 0.0071509 8771200.0 436.93000000000006 412.99 436.63 231.914 412.27000000000004 352.38 436.96000000000004 367.765 552.306 671.09 685.06 True False 510.67310208711274 434.0094269770866 498.55069955610446 288.73294041101497 351.62562913076687 389.66861770908685 516.3499758981461 419.89681498307704 427.20957285144806 519.4903029077534 514.9406953058489 0.9917124568758323 0.8428338077248038 0.9681711002856173 0.56071105477403 0.6828468449593383 0.7567252331409606 1.0027367823229822 0.8154275216754416 0.8296286868485061 1.008835206934271 1.0 9.008262479323454 -10.641041532219223 0.526971508795561 1.0304142869618729 0.8163451759085258 0.22473394305501238 0.12620735063770902 1.7520549321934968 0.6896756466837285 0.18686372038726326 0.030843166793423842 2.2853802386556342e-11 10.641041532219223 -0.21406911105334703 NEEDEGHS(ph)NSSPR ddPTM_A549_PD325901_60min_R1 2 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHS(0.333)NS(0.333)S(0.333)PR;NEEDEGHS(0.702)NS(0.149)S(0.149)PR 97.456 0.0001633 7557400.0 517.39 548.4300000000001 528.1 884.88 703.73 492.83 556.64 507.75 581.96 601.83 605.6400000000001 True False 569.9150519176126 594.6481208152526 563.9400417232789 939.5370278917094 654.3024325367036 488.8165558772656 577.8232398050956 497.62252792783056 557.5022450204143 563.8303510910496 531.1501194682796 1.0729830061756167 1.1195481258867817 1.0617338131973395 1.7688728543114236 1.2318597107569296 0.9202983073158432 1.0878718061544241 0.936877371741886 1.0496133288617446 1.061527297886114 1.0 9.052975858721133 -7.182929752384557 7.037611073398887 1.0158276251799068 1.2635133241848875 0.29574657194868503 0.18531021700921557 0.2638558070171992 20.464602969937967 0.026859864584605327 0.04667629686653768 6.562514071134192e-08 7.182929752384557 0.24768569900498072 NEEDEGHSNS(ph)SPR ddPTM_A549_MK2206_60min_R1 9 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHS(0.001)NS(0.5)S(0.5)PR;NEEDEGHS(0.33)NS(0.609)S(0.061)PR;NEEDEGHS(0.124)NS(0.438)S(0.438)PR;NEEDEGHSNS(0.905)S(0.095)PR;NEEDEGHS(0.098)NS(0.878)S(0.024)PR;NEEDEGHS(0.024)NS(0.488)S(0.488)PR;NEEDEGHSNS(0.644)S(0.356)PR;NEEDEGHS(0.062)NS(0.469)S(0.469)PR;NEEDEGHS(0.078)NS(0.461)S(0.461)PR 171.78 3.1025e-22 2675842300.0 7270.990000000001 9456.1 9189.257 9334.642 11533.02 9478.439999999999 9127.132999999998 12211.15 13547.159999999998 13202.38 14653.66 True False 8498.155353361806 9937.375099731289 10492.43182042193 11621.629709047998 9836.528035699215 10481.442229520744 10785.41492257683 13942.117907578473 10478.749890369148 10219.953188548876 11014.751801558268 0.771524906458588 0.9021878367087163 0.9525799590815615 1.055096829998827 0.8930322001724661 0.9515822433727398 0.9791791151436573 1.2657677775005396 0.9513378130669008 0.9278423493031454 1.0 13.427149366309052 -5.208776208841514 1.283705858657743 0.9944106073343634 0.6518475808199267 0.34846163455237045 0.09373885936611409 1.3493969450025822 1.7182459190883286 0.013203250465158859 0.6245151403693655 6.183349449337288e-06 5.208776208841514 -0.3425630265144367 NEEDEGHSNS(ph)SPR ddPTM_A549_PD325901_60min_R1 7 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHSNS(0.5)S(0.5)PR;NEEDEGHS(0.139)NS(0.469)S(0.392)PR;NEEDEGHSNS(0.5)S(0.5)PR;NEEDEGHS(0.06)NS(0.47)S(0.47)PR;NEEDEGHSNS(0.912)S(0.088)PR;NEEDEGHS(0.001)NS(0.607)S(0.393)PR;NEEDEGHS(0.082)NS(0.459)S(0.459)PR 178.14 9.383100000000001e-23 4470942500.0 5026.44 5687.61 7067.050000000001 6394.480000000001 7669.080000000001 6902.62 6140.52 7389.01 6217.59 7005.91 8319.820000000002 True False 5536.720488530441 6166.92485536903 7546.662510623928 6789.4525066822425 7130.430277689714 6846.407351276368 6374.200848821472 7241.630398983794 5956.286314551656 6563.55564696392 7296.534883684334 0.7588150508141904 0.8451854138542931 1.0342803304482104 0.9305036726219221 0.9772351385085482 0.938309411305017 0.8735928698257472 0.9924752659206344 0.8163171162068193 0.8995442016786053 1.0 12.832995777014766 -5.527129672216908 24.865853557253516 0.927814203017039 0.7804076023105356 0.4536357341185804 0.06024470911268387 79.53188582707692 465228.4769818474 0.01017623072763583 0.039748202910986526 2.970778880240625e-06 5.527129672216908 -0.14740660070650335 NEEDEGHSNSS(ph)PR ddPTM_A549_MK2206_60min_R1 4 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHSNS(0.004)S(0.996)PR;NEEDEGHS(0.015)NS(0.117)S(0.867)PR;NEEDEGHS(0.028)NS(0.148)S(0.824)PR;NEEDEGHS(0.007)NS(0.193)S(0.8)PR 228.8 2.61e-46 411540900.0 2437.0899999999997 3596.74 3506.96 2590.92 4061.46 3907.53 2634.92 3697.3599999999997 4075.4799999999996 4570.96 5037.62 True False 2848.4112108701174 3779.798703081347 4004.2996617623066 3225.695516310817 3464.024614183528 4321.0222309915125 3113.6508570430774 4221.472102690112 3152.390287204229 3538.376961330406 3786.639922761 0.752226583190202 0.9981933271134308 1.0574809708451502 0.8518622266990797 0.9148016935441171 1.1411230851442753 0.8222727591095544 1.114833252909893 0.832503314681605 0.9344371351661093 1.0 11.886702524383125 -5.25155597701043 23.832232712310187 0.9467052433745382 0.752226377222551 0.23587194532038958 0.10553629781515006 835.8177158843974 2015358.6246113535 0.01427446106562012 0.25126130094071075 5.603301907260172e-06 5.25155597701043 -0.19447886615198717 NEEDEGHSNSS(ph)PR ddPTM_A549_PD325901_60min_R1 5 NEEDEGHSNSSPR 13 0 D6RAF8;Q14103-3;Q14103;D6RD83 D6RAF8 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHSNS(0.005)S(0.995)PR;NEEDEGHS(0.197)NS(0.141)S(0.663)PR;NEEDEGHSNS(0.142)S(0.858)PR;NEEDEGHS(0.017)NS(0.213)S(0.771)PR;NEEDEGHS(0.307)NS(0.307)S(0.385)PR 239.54 1.4827999999999998e-56 826093100.0 12497.419999999998 12525.249999999998 14241.82 15348.51 19253.68 15280.89 15267.42 17395.93 16201.21 16331.470000000001 17564.81 True False 13766.148878285645 13580.79677486869 15208.355548220847 16296.55260370466 17901.367938390107 15156.44749820293 15848.430022752787 17048.954529306928 15520.329484925402 15300.298197053904 15404.449722504512 0.893647558093201 0.8816151838925067 0.9872702902202868 1.0579120252440348 1.1620907115064176 0.9839006112669332 1.0288215618373995 1.106755180251583 1.0075224863275447 0.9932388675138163 1.0 13.91105952691904 -5.8620567826761985 3.7911214541340352 1.0255681768368354 0.8865258355497534 0.5459687199626311 0.05248697606679509 0.1388908561495927 3.7354607046304666 0.007637438498839771 0.027250179026682864 1.3738623349676407e-06 5.8620567826761985 -0.13904234128708204 NEEPS(ph)EEEIDAPK ddPTM_A549_MK2206_60min_R1 2 NEEPSEEEIDAPK 13 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPK;NEEPS(1)EEEIDAPK 176.23 5.1597e-22 18476200.0 3913.6000000000004 4965.9 5223.700000000001 4725.2 6662.400000000001 6298.1 5668.5 5746.2 6839.6 6443.9 5880.7 True False 4574.1200016664525 5218.643098926158 5964.499208188224 5882.874212122292 5682.369785627913 6964.560761659573 6698.393075747532 6560.741446999459 5290.44152059685 4988.218514517083 4420.35989093671 1.0347845230984483 1.1805923562075136 1.3493243435715587 1.3308586534287061 1.2854993543124773 1.5755641923951413 1.5153501617552882 1.4842097948746849 1.1968350204796927 1.1284643417258136 1.0 12.109948118471733 -9.386711910063294 1.4059758205433288 1.0528229108101257 1.3460830581331407 0.32318729049982275 0.15091590480346329 0.27758454069683597 1.1324765425354804 0.038078135978234395 0.031559744286134055 4.104763028041755e-10 9.386711910063294 0.293260147323015 NEEPS(ph)EEEIDAPK ddPTM_A549_PD325901_60min_R1 2 NEEPSEEEIDAPK 13 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPK;NEEPS(1)EEEIDAPK 136.81 1.5852e-08 22242000.0 2760.8 2282.7 3136.4 2950.51 4183.700000000001 2943.6000000000004 3290.8 3663.9 3583.0 3080.2 3454.2 True False 3041.0743836064603 2475.071140136346 3349.2549647053415 3132.7563016056047 3889.851344981467 2919.6282975474687 3416.033194794856 3590.8206402260557 3432.418970218134 2885.7156463297783 3029.355297977891 1.0038685081397984 0.8170290034280454 1.1055999165700323 1.034133006351792 1.2840525334146051 0.9637787616052611 1.1276436267066707 1.18534152881405 1.1330526242693584 0.9525840855498221 1.0 11.564795079226604 -5.7768558786652555 24.999036096973605 1.0848590917209329 0.9104487474237861 0.31021913825404934 0.10168754323199994 172.03795441061482 278974.0007889578 0.013007868655300537 0.04065178008032093 1.671645260491615e-06 5.7768558786652555 -0.17441034429714675 NEEPS(ph)EEEIDAPKPK ddPTM_A549_MK2206_60min_R1 7 NEEPSEEEIDAPKPK 15 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK 208.49 2.1953e-45 5255241700.0 56311.03 75284.1 80791.20000000001 75686.3 109212.40000000001 81854.5 81553.70000000001 80104.9 119864.8 100834.79999999999 102968.5 True False 65814.95519149635 79115.73912561005 92248.6070081698 94229.44689768692 93147.40063279142 90516.28885938041 96370.9516418085 91460.01488596757 92715.614184753 78056.14864718997 77398.57966397144 0.8503380227031841 1.0221859298851959 1.191864339225219 1.2174570555013706 1.2034768730536662 1.169482557074819 1.2451255831851986 1.181675623545604 1.197898134400928 1.0084958792018328 1.0 16.240019471364274 -5.418253887026446 2.972889633770267 1.1365550040310621 0.8435324076574846 0.5659189302079453 0.07911990646740172 0.2164721728837474 3.1219569941860583 0.013522638862929209 0.12243169695515689 3.81721052815434e-06 5.418253887026446 -0.2930225963735775 NEEPS(ph)EEEIDAPKPK ddPTM_A549_PD325901_60min_R1 6 NEEPSEEEIDAPKPK 15 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK 210.57 1.8365e-45 6494800900.0 59311.399999999994 58036.3 73598.3 71942.2 83878.20000000001 72077.0 78848.10000000002 82120.4 77992.7 67571.6 71718.50000000001 True False 65332.64966525503 62927.222679412575 78593.12322053096 76385.90630140914 77986.88459608113 71490.02880905321 81848.70759283598 80482.44419979252 74714.93804592016 63305.11764415855 62897.57916102933 1.038714852569945 1.0004712982403878 1.2495413061815648 1.214449066566572 1.2399028012893853 1.1366101805925732 1.3013013964065023 1.2795793617707083 1.187882571038803 1.0064793985486444 1.0 15.940716870428446 -10.499704716066823 0.9324588035547196 1.0054958466014732 1.1854750375273124 0.36814543238555497 0.09008537913247025 0.48691435841117847 0.7909490379852318 0.054463669745252144 0.017592638852142677 3.164428475660768e-11 10.499704716066823 0.17997919092583925 NEEPVRS(ph)PER ddPTM_A549_MK2206_60min_R1 3 NEEPVRSPER 10 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 NEEPVRS(1)PER;NEEPVRS(1)PER;NEEPVRS(1)PER 69.602 0.00098272 159206000.0 390.27 979.13 1048.57 751.8 1224.09 673.1899999999999 482.16999999999996 858.4 997.1600000000001 1254.94 1183.46 True False 456.13803481458666 1028.9635347976334 1197.2729932289226 935.9910337495845 1044.0279825422172 744.4265189726437 569.7740476904272 980.0808287397477 771.3048521373111 971.4481824063175 889.57422016562 0.512759952429448 1.156692169660742 1.345894435886435 1.0521786856360593 1.1736266169537166 0.836834636275821 0.6405019781085239 1.1017414921908115 0.8670494655226298 1.0920372470162798 1.0 9.796971169182674 -7.26629900262277 24.741469204693615 0.9184660043884143 1.0710122701139828 0.06645449712857199 0.22610684150799995 655.2742682045131 3336154.559402111 0.03185333478290832 0.05191758391166407 5.416278626060144e-08 7.26629900262277 0.1525462657255685 NEEPVRS(ph)PER ddPTM_A549_PD325901_60min_R1 3 NEEPVRSPER 10 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 NEEPVRS(1)PER;NEEPVRS(1)PER;NEEPVRS(1)PER 84.75299999999999 0.00024613 168447000.0 1617.0900000000001 1999.6499999999999 1997.69 2066.55 2255.04 1856.5700000000002 1734.96 1947.46 2231.96 2279.75 2155.51 True False 1781.2557863612599 2168.1675232722864 2133.265256485848 2194.1961000244246 2096.653769865669 1841.4507094638218 1800.9848522065397 1908.6163825471858 2138.1584830499773 2135.80619593543 1890.3959349036913 0.9422659843224896 1.1469383123608687 1.1284753723269776 1.1607071616646334 1.1091082725865498 0.9741084793210989 0.9527024571697956 1.0096384293401597 1.1310638388348568 1.1298195031530478 1.0 10.884472716726883 NEEPVRS(ph)PERR ddPTM_A549_MK2206_60min_R1 6 NEEPVRSPERR 11 2 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR 86.413 7.0403e-05 2215153000.0 10845.929999999998 12377.15 12188.830000000002 11020.000000000002 16136.939999999999 12124.57 12226.25 11497.86 17400.059999999998 17806.67 17497.2 True False 12676.457826470327 13007.094067917977 13917.389376063102 13719.900494706597 13763.21750247516 13407.583949761809 14447.601365856619 13127.716865719465 13458.974192186153 13784.13087973059 13152.162341846693 0.963830699240778 0.9889700058318815 1.0581826025505827 1.043166905798715 1.0464604332539487 1.0194205029770984 1.0984962769116817 0.9981413340641752 1.0233278636900083 1.0480505426756435 1.0 13.68301239149279 -3.960341653584933 11.136990194871663 1.0194519353405898 0.7475272126572652 0.0 0.03659138609190332 0.0 0.0 0.004637257903552237 0.0 0.00010956159508045979 3.960341653584933 -0.27192472268332457 NEEPVRS(ph)PERR ddPTM_A549_PD325901_60min_R1 5 NEEPVRSPERR 11 2 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR 107.69 2.7541999999999998e-05 2472616100.0 15345.12 13835.22 14435.439999999999 15385.52 18743.36 15211.88 13611.61 15502.76 15638.45 16294.47 17478.649999999998 True False 16902.945285919723 15001.162544108813 15415.115765752493 16335.848627348863 17426.891054681684 15087.999492762749 14129.607267108795 15193.54529012006 14981.220330674798 15265.634383368357 15328.886856291267 1.102685762142111 0.9786204754947389 1.005625255784691 1.06569046927529 1.1368660502265602 0.9842853975121062 0.9217634261100789 0.99117081576503 0.9773195190964711 0.9958736421296664 1.0 13.903965315605756 -7.451051249325812 24.999979976367115 0.9832120486115712 1.051977677862327 0.4368871832729072 0.044529214969000565 129.4281351859607 45047.89825260515 0.006708204805625225 0.010723804966354803 3.539555697613742e-08 7.451051249325812 0.06876562925075591 NEES(ph)EKEDA ddPTM_A549_MK2206_60min_R1 4 NEESEKEDA 9 1 Q9BYD6 Q9BYD6 MRPL1 39S ribosomal protein L1, mitochondrial 1 NEES(1)EKEDA;NEES(1)EKEDA;NEES(1)EKEDA;NEES(1)EKEDA 109.24 0.00034165 23311700.0 7376.700000000001 8526.1 9244.5 7454.5 1487.3700000000001 1236.8400000000001 1034.73 1314.743 2338.81 11269.900000000001 10898.8 True False 8621.706617000447 8960.042072082459 10555.509108504704 9280.852834645226 1268.5798433071252 1367.7215878520549 1222.7270472379357 1501.1118464815722 1809.0732693121115 8724.02176271452 8192.327168422307 1.052412390246474 1.0937114555946132 1.2884628374207743 1.1328713616832455 0.15484975358368536 0.1669515340066006 0.1492527119706586 0.18323387428515736 0.2208253200977209 1.0649015332714802 1.0 13.000057616557044 -6.740092359608514 24.072413915405733 0.4891761439218205 1.1488969131342825 0.5355124161516032 0.3192682869934874 124.6719146257669 140587.550045119 0.054908064832648186 0.11419828259444201 1.8193139115126977e-07 6.740092359608514 0.659720769212462 NEES(ph)EKEDA ddPTM_A549_PD325901_60min_R1 4 NEESEKEDA 9 1 Q9BYD6 Q9BYD6 MRPL1 39S ribosomal protein L1, mitochondrial 1 NEES(1)EKEDA;NEES(1)EKEDA;NEES(1)EKEDA;NEES(1)EKEDA 123.8 7.939399999999999e-05 64075800.0 5523.23 5159.5 5629.67 5290.48 6485.4 5909.14 5859.09 5994.8 6079.8 5146.52 6638.02 True False 6083.944243612976 5594.309172266828 6011.733260155826 5617.260934048157 6029.887877415392 5861.017923009122 6082.060876167066 5875.22901117038 5824.287149074019 4821.5678488894055 5821.585621875751 1.0450665228990812 0.960959699921807 1.032662516817679 0.9649022274859612 1.035781017246728 1.0067734640860038 1.0447430083846108 1.0092145667484564 1.0004640535025573 0.8282224400808291 1.0 12.507196437324287 -4.907381552576216 18.041767795918364 1.0041449080847553 2.9636658479065434 0.011334880699520156 0.05868196857992926 172.1581561674056 35489.70159619604 0.002985813444377164 799.4042755596864 1.2377087107286072e-05 4.907381552576216 1.959520939821788 NEFNLESK ddPTM_A549_PD325901_60min_R1 2 NEFNLESK 8 0 H3BSC1;P62491;H3BMH2;P62491-2;Q15907-2;Q15907 H3BSC1 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B 0 ; 86.898 0.0043016999999999994 3176300.0 2512.9 2115.0 2589.0 2240.6 2709.0 2832.6 3027.3 2629.7 2959.0 2886.7 2631.1 False True 2768.0077581007945 2293.2384725931447 2764.705108921737 2378.996773228195 2518.7291855426497 2809.532244745538 3142.5055581021247 2577.2485705402596 2834.643520199682 2704.433269352696 2307.491379917096 1.1995744739034493 0.9938232023538639 1.1981432013068096 1.0309883685518548 1.091544353085793 1.2175699849619717 1.3618709848506692 1.1169049613666837 1.228452485183943 1.1720231299194979 1.0 11.172109543075244 -4.887809546445073 19.724916708360187 1.1265924069541944 13.118271546783648 0.007846460179229964 0.10673140262318857 1700.9758362447483 298277.2741104691 0.016044491702301697 2409.947360484028 1.29476351675554e-05 4.887809546445073 11.991679139829454 NEFNLESKS(ph)TIGVEFATR ddPTM_A549_PD325901_60min_R1 1 NEFNLESKSTIGVEFATR 18 1 H3BSC1;P62491;H3BMH2;P62491-2;Q15907-2;Q15907 H3BSC1 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B 1 NEFNLES(0.077)KS(0.707)T(0.212)IGVEFAT(0.005)R 60.464 0.00091669 1823100.0 1437.1 1457.0 1694.7 1502.2 2069.5 1584.3 1762.1 1951.9 1839.2 1885.1 1900.0 True False 1582.9933340628963 1579.7865033419446 1809.7125330589665 1594.9874822562685 1924.1454593874184 1571.3979860729908 1829.1576797581183 1912.9678232640713 1761.9048199902861 1766.0744642868203 1666.3120450923504 0.9499981343381357 0.9480736264223485 1.0860586037224909 0.9571961547981676 1.1547329715670263 0.9430394449233551 1.0977281747109633 1.1480249626102 1.0573678712696564 1.0598701902733596 1.0 10.702442879694585 -5.74351948014764 24.754798254783847 1.0415614037184848 0.9490357746167862 0.25813239418659784 0.06634300280264326 236.7210349508524 327003.702878262 0.00865413496664212 0.033375119441185416 1.8050137719689061e-06 5.74351948014764 -0.09252562910169859 NEGNRKENET(ph)PR ddPTM_A549_PD325901_60min_R1 1 NEGNRKENETPR 12 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LNQ0 Q14966-3 ZNF638 Zinc finger protein 638 1 NEGNRKENET(1)PR 44.294 0.021462000000000002 6087700.0 1576.1 1399.5 1449.3 1341.6 1684.4 1556.0 1468.1 1617.7 1835.3 1802.6 1879.0 True False 1736.1045117365034 1517.4407765456776 1547.6582133488887 1424.4675850053309 1566.093554864541 1543.3284518901567 1523.9693488751461 1585.4337044388994 1758.1687234276694 1688.7835283663585 1647.8949119623812 1.0535286559438906 0.9208358891882532 0.9391728817864201 0.8644165199278491 0.950360088799335 0.9365454318032316 0.9247976541540144 0.9620963648409471 1.0669179877095254 1.0248126358708671 1.0 10.68640852789633 -8.611617956837462 5.5104988595203 1.0314132386111146 0.9380693428958264 0.433314396224897 0.044440758842384374 0.13564143406921314 6.6605324915830675 0.007810137262227122 0.008865011150355285 2.4455809522205656e-09 8.611617956837462 -0.09334389571528812 NEGRPET(ph)PK ddPTM_A549_MK2206_60min_R1 2 NEGRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NEGRPET(1)PK;NEGRPET(1)PK 74.76 0.00084222 66637000.0 3490.3999999999996 3987.1 3673.5 3714.3999999999996 6477.299999999999 4397.0 4264.299999999999 5060.3 6930.4 5220.1 4862.0 True False 4079.49418791307 4190.026359718977 4194.457538005521 4624.428166745753 5524.497750427427 4862.287621507619 5039.068112006733 5777.613021518807 5360.6754655746545 4040.8757844830966 3654.6312156264203 1.116253309080825 1.1464977209747789 1.147710203992928 1.265361097714234 1.511643015253046 1.3304454908384515 1.3788171267351839 1.5809017875223554 1.4668170738140567 1.105686332236527 1.0 11.835510117589473 -6.2832434356913245 4.648646416619448 1.2934432082374598 1.1361572422873276 0.1967285624903784 0.16269272283721056 0.38659353681477715 22.17228649324822 0.030539587384622598 0.07667504745247981 5.209026469703526e-07 6.2832434356913245 -0.15728596595013222 NEGRPET(ph)PK ddPTM_A549_PD325901_60min_R1 1 NEGRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NEGRPET(1)PK 49.423 0.011983 44722000.0 3569.4 5183.3 3650.1 5926.6 4606.7 3773.1 3751.1 4183.4 5159.8 5427.3 5110.8 True False 3931.762860346599 5620.114881792932 3897.8177358343883 6292.672621714822 4283.141284252245 3742.373124567316 3893.850163180683 4099.958805186185 4942.951549687838 5084.619351771185 4482.204000030518 0.8771940903001803 1.2538730681947243 0.8696207793772549 1.4039237441383696 0.9555882071014801 0.8349403830217981 0.8687355959599722 0.9147193668914376 1.1027948637889269 1.1344015916581587 1.0 12.129992596860406 -4.948513008846966 14.613382892110168 1.0323204006885898 6.828158252486428e-05 0.0659825943545379 0.1693609159076661 1216542.7572505942 9927511.138750711 0.02148900509742221 34873047.43602558 1.1258667442031736e-05 4.948513008846966 -1.032252119106065 NEGRPET(ph)PKHR ddPTM_A549_MK2206_60min_R1 1 NEGRPETPKHR 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NEGRPET(1)PKHR 48.70399999999999 0.010284999999999999 24625000.0 406.7 194.01 421.87 356.92 401.34 295.27 360.42 367.97 386.96 730.04 503.15 True False 475.3410171396535 203.88428031628982 481.6975096116476 444.36541602274747 342.3034176518833 326.51527541563684 425.90364864795345 420.13087436086306 299.31417784814255 565.1234569651999 378.20396876644037 1.2568377288319788 0.5390855124584862 1.273644777400841 1.174935888357018 0.9050762179158215 0.8633311714856069 1.1261215741259711 1.1108579207435938 0.7914094048890953 1.4942293144316303 1.0 8.563020692379215 -8.755484466586642 24.998678192810132 0.901498885930189 1.0210622413012744 0.0 0.27068110007516094 312.6396589073833 1312457.652340847 0.03384983535047967 0.037886904044812174 1.755963698640191e-09 8.755484466586642 0.11956335537108542 NEGRPET(ph)PKHR ddPTM_A549_PD325901_60min_R1 2 NEGRPETPKHR 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NEGRPET(1)PKHR;NEGRPET(1)PKHR 66.285 0.001807 65348000.0 2401.46 2050.66 2365.31 2289.2200000000003 2741.66 2469.21 2215.42 2589.39 2640.09 2628.2 2863.2 True False 2645.254451338586 2223.4763149918967 2525.8341603644944 2430.6199202041626 2549.0952598135345 2449.1015724239674 2299.729020424341 2537.742585112842 2529.1361984602822 2462.255003468581 2511.04455132022 1.0534478370556202 0.8854786402825351 1.0058898234348326 0.9679716430862316 1.015153338666695 0.9753317881740947 0.9158455668240627 1.0106322421792895 1.0072048292136235 0.9805700190281423 1.0 11.294071910005297 NEGS(ph)ES(ph)APEGQAQQR ddPTM_A549_MK2206_60min_R1 1 NEGSESAPEGQAQQR 15 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NEGS(1)ES(1)APEGQAQQR 45.358999999999995 0.050869 1258300.0 128.23 127.04 125.11 0.0 241.73 0.0 267.4 178.76 165.48 153.49 0.0 True False 149.8720890774963 133.5057933682875 142.8524792649709 0.0 206.17183721779463 0.0 315.9831187183361 204.0997774295401 127.99904421725931 118.81650239656533 0.0 0.0 NEGS(ph)ESAPEGQAQQR ddPTM_A549_MK2206_60min_R1 1 NEGSESAPEGQAQQR 15 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NEGS(0.981)ES(0.019)APEGQAQQR 302.84 2.1474999999999997e-142 60059000.0 2032.2 2845.3 2867.9 2765.8 4884.2 4028.4 3073.8 4700.0 5114.4 3644.5 2308.6 True False 2375.185677480216 2990.1136167410937 3274.6113442891037 3443.421124161481 4165.740650060617 4454.682614164497 3632.2696720883378 5366.239393146336 3955.996566018559 2821.2049187848233 1735.310905881356 1.368737826420719 1.723099651253808 1.887045908137104 1.9843251791312777 2.400573082288593 2.5670803998675877 2.0931521030483733 3.092379224356254 2.279704779478308 1.6257633771695494 1.0 10.760978450168453 -10.620969766128697 0.9896580788547421 1.0261667220883661 2.1677290136428256 0.3007333377556942 0.4642501123252728 0.36514053553014775 0.6585732135441316 0.27709577840316446 0.08239219025099388 2.3934823754215654e-11 10.620969766128697 1.1415622915544594 NEGS(ph)ESAPEGQAQQR ddPTM_A549_PD325901_60min_R1 1 NEGSESAPEGQAQQR 15 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NEGS(0.774)ES(0.226)APEGQAQQR 292.2 2.0618999999999996e-123 83207000.0 3051.2 2517.1 3198.9 3131.6 4202.7 3248.5 3698.1 3421.8 3124.3 2733.0 3258.1 True False 3360.9555778252775 2729.224850763217 3415.9965905483755 3325.031819620377 3907.5168505279075 3222.045293036741 3838.8332191779677 3353.5495146498306 2992.9965360459173 2560.437913583303 2857.3743547975705 1.176239148427362 0.9551513074164788 1.1955019421283986 1.163666851715668 1.3675200954915598 1.1276244877143533 1.3434827721234757 1.1736472363235062 1.0474639177119496 0.8960806655537776 1.0 11.480474345937965 -8.796004386809162 3.7808738923011016 1.0204865693341991 1.1895473370100982 0.40580870531929425 0.10912230982293653 0.18302278536801558 5.383248976892759 0.018313801930021276 0.019721162653415312 1.5995418715584106e-09 8.796004386809162 0.16906076767589906 NEGS(ph)PSPR ddPTM_A549_MK2206_60min_R1 3 NEGSPSPR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NEGS(0.883)PS(0.117)PR;NEGS(0.987)PS(0.013)PR;NEGS(0.5)PS(0.5)PR 90.10799999999999 0.0026435 9489200.0 1565.06 1198.68 1472.79 1503.2200000000003 1320.19 1134.24 1018.76 1448.83 1397.35 2696.0299999999997 2460.23 True False 1829.2038659566908 1259.6876920237632 1681.6537681772556 1871.5089674821113 1125.9917998451176 1254.264523952423 1203.8555049569638 1654.2060893557884 1080.852456109422 2086.9949505258455 1849.28699210625 0.9891400706135475 0.681174797314201 0.9093525101054931 1.0120165098606742 0.6088788839436254 0.6782422248716924 0.6509836007583818 0.8945102065914206 0.5844698311960668 1.1285403290210014 1.0 10.852753419603797 -5.237350434857126 22.23920110451322 0.7903112112379036 0.9891411275174691 0.05791128230172249 0.17881443028518776 2749.2959473761152 2538000.652989963 0.024093979157256903 1.6053216886458872 5.789613404714569e-06 5.237350434857126 0.19882991627956548 NEGS(ph)PSPR ddPTM_A549_PD325901_60min_R1 1 NEGSPSPR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NEGS(0.783)PS(0.217)PR 61.593 0.010759999999999999 6189000.0 498.81 406.48 446.75 602.66 656.24 496.4 279.08 410.71 559.71 631.71 815.67 True False 549.4488239954861 440.73549614168405 477.06914152598915 639.884939459834 610.1479663050976 492.35748298089567 289.7005421184356 402.5180668542377 536.1873351439557 591.8237227916972 715.347760958146 0.7680863126761553 0.6161136166154448 0.6669051999086383 0.8945089009613504 0.8529389474678128 0.6882771008067821 0.4049786103061355 0.5626886513422504 0.749547792567044 0.8273230938739514 1.0 9.48250095759296 -10.069195811158108 0.9225394802661343 0.975593967120971 0.6878785291743342 0.2650078622527561 0.1364638530333059 0.38554050744887725 0.6589186597736811 0.0581498799490903 0.02773711355862017 8.527155618861694e-11 10.069195811158108 -0.2877154379466368 NEGSES(ph)APEGQAQQR ddPTM_A549_MK2206_60min_R1 3 NEGSESAPEGQAQQR 15 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NEGS(0.005)ES(0.995)APEGQAQQR;NEGS(0.066)ES(0.934)APEGQAQQR;NEGSES(1)APEGQAQQR 308.04 1.2527999999999996e-142 192488000.0 1496.5700000000002 2087.8399999999997 2511.55 2087.57 3101.6500000000005 3286.1499999999996 2964.47 3103.33 4260.57 2595.04 2994.31 True False 1749.1544283764215 2194.102138114338 2867.7255558943148 2599.024743714577 2645.401393730909 3633.888211830172 3503.0758262787813 3543.236531049536 3295.5576977322253 2008.818661666447 2250.7401882481176 0.7771463083608465 0.9748358116012206 1.2741255391749293 1.1547422298162053 1.1753472957667226 1.614530291325468 1.5564105730948135 1.5742539052485858 1.4642106249932605 0.892514681239165 1.0 11.136183815128447 -5.387211885418549 1.167352771770498 1.299132540764655 0.5832038118002287 0.3596778799393867 0.2256720269714496 1.2251243625270403 1.579622556077429 0.036754868854875944 1.0038459548699301 4.100040196961596e-06 5.387211885418549 -0.7159287289644263 NEGSES(ph)APEGQAQQR ddPTM_A549_PD325901_60min_R1 3 NEGSESAPEGQAQQR 15 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NEGS(0.128)ES(0.872)APEGQAQQR;NEGS(0.001)ES(0.999)APEGQAQQR;NEGS(0.286)ES(0.714)APEGQAQQR 297.56 9.183299999999998e-124 148538000.0 4141.27 4269.32 4330.7699999999995 4538.219999999999 5832.6 4235.66 4791.1 4428.98 5171.42 4383.2 4261.92 True False 4561.688681758157 4629.110579579843 4624.682095235609 4818.535542354571 5422.938297377653 4201.166189288599 4973.427932290518 4340.640519432405 4954.08320149748 4106.444003958406 3737.7308585368346 1.220443326286973 1.238481515866005 1.2372967102949672 1.2891606497961776 1.4508637734019476 1.123988416579887 1.330600870025566 1.1613036582124547 1.3254253420046398 1.0986462534025008 1.0 11.867946973853888 -10.85018927953046 0.8788022002597058 0.9839168373167774 1.2682905913828029 0.4559848950144396 0.08827729244933939 0.37269047689003976 0.4612916763518569 0.0736090574550239 0.014330186863464814 1.4119220493775131e-11 10.85018927953046 0.2843737540660255 NEGSPS(ph)PR ddPTM_A549_MK2206_60min_R1 1 NEGSPSPR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NEGS(0.358)PS(0.642)PR 72.643 0.0055588 4340400.0 365.78 439.44 480.03 364.31 339.7 342.28 170.38 415.46 354.56 697.79 747.78 True False 427.51472153760096 461.8056190000018 548.1054721570137 453.5659663544972 289.7305799978689 378.4998424129244 201.33584056555765 474.3527272928885 274.2527261159745 540.158754363798 562.0855883219097 0.7605865199531869 0.821593060905029 0.9751281362565561 0.8069339897302924 0.5154563397770991 0.6733847127141701 0.35819427636748347 0.8439154768387763 0.4879198681018457 0.9609902221055453 1.0 9.13464601496499 -6.535297898778316 24.82058215224424 0.70654249508889 0.8562982371422444 0.12429288281331619 0.19092447528315815 414.77222878638713 828951.0446652494 0.03204659566925468 0.06674510714643174 2.915426528214914e-07 6.535297898778316 0.1497557420533544 NEGSPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NEGSPSPR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NEGS(0.332)PS(0.668)PR;NEGS(0.407)PS(0.593)PR 86.898 0.002724 13724100.0 1413.63 1561.29 1560.0 1478.27 1717.98 1421.6100000000001 1244.6100000000001 1182.02 1589.12 1791.9699999999998 1795.51 True False 1557.140676940597 1692.865387647731 1665.8709810420658 1569.5793805052417 1597.3150115092524 1410.032879493293 1291.9743146267256 1158.4436838232482 1522.3348127136585 1678.8247083804858 1574.673652675666 0.9888656448240705 1.0750579237616855 1.0579150659004413 0.9967648711453524 1.0143784452067985 0.8954445113737582 0.820471157583299 0.7356722339608813 0.9667621034535797 1.0661413592129694 1.0 10.620837149178657 -7.095881941237809 5.50785734685767 0.9440636480006868 1.0317052310226213 0.25547072643961055 0.08804783976647046 0.3360779942723509 15.446624657311746 0.014157760159671778 0.024866281843625725 8.018960214533015e-08 7.095881941237809 0.08764158302193459 NEGT(ph)LDSR ddPTM_A549_MK2206_60min_R1 2 NEGTLDSR 8 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 NEGT(0.985)LDS(0.015)R;NEGT(0.993)LDS(0.007)R 64.654 0.0098762 3690000.0 607.78 976.56 980.29 638.29 891.5 780.98 595.27 1047.14 1305.08 990.01 1220.0900000000001 True False 710.3584052056516 1026.2627327749906 1119.309862510258 794.6710786539264 760.3615309629085 863.6227852274327 703.4228537003146 1195.5753017317563 1009.4814637845101 766.366053408194 917.10798022905 0.7745635416107031 1.1190206114210008 1.2204777263313176 0.8664967438790091 0.8290861570880742 0.9416805914301833 0.767001126219219 1.303636351995496 1.1007225817971724 0.8356333931548521 1.0 9.84094779640824 -8.243545726844813 24.991371847315065 1.0680979033746625 0.9435285305608064 0.1194766383148852 0.16554692630075388 1331.3943659398 1859509.1192418458 0.024760506684963643 0.031931806603889 5.707609776125469e-09 8.243545726844813 -0.12456937281385605 NEGT(ph)LDSR ddPTM_A549_PD325901_60min_R1 1 NEGTLDSR 8 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 NEGT(0.997)LDS(0.003)R 50.193999999999996 0.033705 2219600.0 1233.5 1080.9 1206.2 1291.5 1290.8 1076.4 1017.6 1115.4 1053.9 1263.5 1181.7 True False 1358.7240119452936 1171.9912364188795 1288.059985469833 1371.2730217906867 1200.138661018256 1067.6341552792826 1056.3253248520864 1093.152471985628 1009.6082480359727 1183.7223943697418 1036.3583914134895 1.3110561203563273 1.1308744601569736 1.2428711883280528 1.323164875348196 1.1580343932772008 1.030178521373418 1.0192664367886906 1.0548015831614748 0.9741883275137742 1.1421940558181447 1.0 10.017307283924112 -7.185930369981426 2.597237650670826 0.9966075101257285 1.243050931551927 0.6692172193866348 0.06775368397147387 0.08152638517383563 1.0765109442054557 0.007659383750534434 0.013975643138781055 6.517328773931522e-08 7.185930369981426 0.24644342142619846 NEHDKT(ph)PEHSR ddPTM_A549_MK2206_60min_R1 3 NEHDKTPEHSR 11 1 O75182-2;O75182;M0R271;O75182-3 O75182-2 SIN3B Paired amphipathic helix protein Sin3b 1 NEHDKT(0.994)PEHS(0.006)R;NEHDKT(0.998)PEHS(0.002)R;NEHDKT(0.997)PEHS(0.003)R 55.885 0.009107899999999999 115974400.0 1125.48 1098.85 710.9200000000001 464.81 893.06 638.91 602.99 732.2 1073.8000000000002 1264.6799999999998 1804.05 True False 1315.433508655857 1154.7767714321683 811.7391460239243 578.6884708661138 761.6920570294287 706.5190321258664 712.5454777710157 835.9915922684569 830.5860145062428 978.9879096415937 1356.0545957529512 0.9700446521664274 0.8515710024130532 0.5986035876182441 0.4267442274658538 0.5616971908173787 0.5210107574861842 0.5254548600053774 0.6164881523846548 0.6125018986016996 0.7219384180457789 1.0 10.405199548266467 -10.574249184213963 0.8068171960532902 1.0069447717494553 0.6217404316362607 0.1508582620517186 0.1666422885202677 0.49765852906500874 0.5640916472686948 0.11674996782845677 0.03017330827629016 2.6653289456357287e-11 10.574249184213963 -0.3852043401131946 NEHDKT(ph)PEHSR ddPTM_A549_PD325901_60min_R1 4 NEHDKTPEHSR 11 1 O75182-2;O75182;M0R271;O75182-3 O75182-2 SIN3B Paired amphipathic helix protein Sin3b 1 NEHDKT(1)PEHSR;NEHDKT(0.999)PEHS(0.001)R;NEHDKT(1)PEHSR;NEHDKT(0.996)PEHS(0.004)R 89.46600000000001 0.00016975 137382000.0 2311.3300000000004 2295.12 1991.23 2127.93 2713.0299999999997 2028.5699999999997 2096.42 2025.25 2022.08 2606.1400000000003 2382.99 True False 2545.9745200887864 2488.5378171243397 2126.3668420387135 2259.3674032203303 2522.476132245395 2012.0499984902408 2176.200410305042 1984.8547999721113 1937.099009572616 2441.587875633366 2089.89733701822 1.2182294675399123 1.1907464414854387 1.0174503811141875 1.0810901393098589 1.2069856674607573 0.9627506398763834 1.0412953649723082 0.9497379439719374 0.9268871610393982 1.1682812511340503 1.0 11.029216358541207 -7.276145089019502 24.521194167471712 0.969507370395238 1.1351551794516612 0.33534919277121766 0.08516088360840703 312.1991898021656 520579.31541950343 0.009588858663767396 0.015369250824139539 5.2948652358152266e-08 7.276145089019502 0.16564780905642318 NEHRPAS(ph)ALVNPLAR ddPTM_A549_MK2206_60min_R1 2 NEHRPASALVNPLAR 15 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 NEHRPAS(1)ALVNPLAR;NEHRPAS(1)ALVNPLAR 138.07 1.8373e-10 15911900.0 2160.5 2467.8 2312.1 2127.83 3699.9 2768.5 2392.8 2730.7 4079.6000000000004 3350.6 3220.8 True False 2525.1395808463744 2593.4004791739617 2639.9905467871413 2649.148445521917 3155.6496112278915 3061.460832418431 2827.5407870951203 3117.785087418018 3155.577113782518 2593.6971329072367 2420.9864704421184 1.043020938644583 1.0712164280291732 1.090460677504335 1.094243391223137 1.303456111694672 1.2645509877051686 1.1679291981250757 1.287815989673272 1.3034261662793387 1.0713389622675495 1.0 11.241379301594723 -6.5465235370448 24.927381466360416 1.178720815390067 1.0725011541900311 0.28079103829606067 0.0930105681007027 349.1466349885857 368084.65210513317 0.018147789744177384 0.03777907474299657 2.841034207983111e-07 6.5465235370448 -0.1062196612000359 NEHRPAS(ph)ALVNPLAR ddPTM_A549_PD325901_60min_R1 4 NEHRPASALVNPLAR 15 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 NEHRPAS(1)ALVNPLAR;NEHRPAS(1)ALVNPLAR;NEHRPAS(1)ALVNPLAR;NEHRPAS(1)ALVNPLAR 112.74 4.5303000000000003e-07 32884100.0 5640.3 5741.3 4988.91 6497.4 6018.200000000001 6071.5 5287.9 6523.1 6682.0 6098.4 5969.799999999999 True False 6212.899103830597 6225.139500094106 5327.487433352934 6898.729641333961 5595.502393662892 6022.055716999406 5489.133928149906 6392.991653227045 6401.178777280928 5713.345983240545 5235.552445680163 1.1866749819222686 1.1890129197789714 1.017559749162407 1.3176698567934468 1.0687510920227192 1.1502235493731297 1.0484345224502472 1.2210729850489572 1.2226367405721472 1.0912594310758186 1.0 12.354126060326694 -10.929239298664529 1.1849145093079008 0.9999575545499612 1.1610210385865745 0.17658289935429694 0.08652662321661281 0.42332224699413495 1.0556849199513472 0.05539866491859656 0.013032492146889224 1.1769572848400888e-11 10.929239298664529 0.1610634840366133 NEIIQS(ph)PISQVPSVEK ddPTM_A549_MK2206_60min_R1 2 NEIIQSPISQVPSVEK 16 0 Q7Z3T8 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 1 NEIIQS(1)PISQVPSVEK;NEIIQS(0.994)PIS(0.006)QVPSVEK 176.04 2.6941e-28 6790000.0 2758.31 3709.2 3467.0 2835.8 4533.0 4029.4 3191.1 3412.2 5673.700000000001 4585.1 4720.4 True False 3223.845293795124 3897.9824367258507 3958.67273288829 3530.5711273039005 3866.201704828792 4455.788433500754 3770.8815637325456 3895.889799424235 4388.616009037129 3549.3227255097504 3548.194403587612 0.9085875595022257 1.0985819809603905 1.115686538732387 0.9950331705991383 1.0896251064822264 1.2557903898939318 1.0627606987711193 1.0979922056934268 1.2368589513020365 1.000317998901356 1.0 11.792869340921238 -5.260962252967451 4.684859828022003 1.1101984602557344 0.896500506211785 0.27607998371146125 0.0839772362456226 0.19613622311503556 11.678082902876092 0.013112435807620807 0.13674495256626504 5.483246208979065e-06 5.260962252967451 -0.21369795404394942 NEIIQS(ph)PISQVPSVEK ddPTM_A549_PD325901_60min_R1 2 NEIIQSPISQVPSVEK 16 0 Q7Z3T8 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 1 NEIIQS(0.848)PIS(0.152)QVPSVEK;NEIIQS(0.998)PIS(0.002)QVPSVEK 168.42 6.9317e-28 13582100.0 4924.0 5098.9 5762.5 5992.9 6092.8 6636.8 6728.9 6995.7 5896.7 6303.2 6298.4 True False 5423.880855142787 5528.602197591109 6153.577902727501 6363.067822136595 5664.862747018922 6582.75210122403 6984.971971695363 6856.165275479516 5648.882205326621 5905.21487628916 5523.736728847185 0.9819224053197703 1.0008808292253528 1.1140244737934433 1.1519498727928295 1.025549012398567 1.191720826745098 1.264537452557617 1.2412186916284136 1.0226559451731065 1.0690616092272722 1.0 12.431428844475668 -8.963832022715744 24.825610321461976 1.0099951912068978 1.1227484231428888 0.16185631360835684 0.08921144778210378 168.5040138173543 115661.42017509768 0.016346914694636127 0.017346430866266183 1.0868459147577866e-09 8.963832022715744 0.11275323193599096 NEIS(ph)PR ddPTM_A549_PD325901_60min_R1 1 NEISPR 6 0 P41250 P41250 GARS Glycine--tRNA ligase 1 NEIS(1)PR 69.812 0.051623 11554000.0 578.56 543.64 938.2 594.96 841.55 754.32 840.25 585.35 709.84 940.21 816.0 True False 637.2949852866388 589.4544507047463 1001.8718938549148 631.7093279478028 782.4424311898923 748.1770680139989 872.2261735524428 573.6747350518083 680.0078933350939 880.8449801427571 715.6371730501882 0.8905280626638785 0.8236777977761748 1.3999718454880385 0.882722910068145 1.0933507378536065 1.0454698221238554 1.218810601795378 0.801627915172003 0.9502132071155063 1.2308541441306358 1.0 9.48308451844777 -8.264373903366417 24.997551836916273 0.9627180416085132 1.0503380135486042 0.009292382322234505 0.180126937697785 595.092411072716 5069253.550972323 0.024896232665638666 0.030770292073725513 5.440340681190876e-09 8.264373903366417 0.08761997194009108 NEKPTQSVS(ph)SPEATSGSTGSVEK ddPTM_A549_MK2206_60min_R1 1 NEKPTQSVSSPEATSGSTGSVEK 23 1 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQSVS(0.598)S(0.402)PEATSGSTGSVEK 165.48 3.951499999999999e-34 33578000.0 1016.8 1327.2 1636.3 1452.0 2158.2 1487.6 1256.9 1426.7 2176.1 1689.6 1941.7 True False 1188.410981626751 1394.748811070459 1868.3519448586985 1807.740065182757 1840.7316389502525 1645.0168446110376 1485.262460422876 1628.9390940855046 1683.2168245176335 1307.9181865218368 1459.522301806216 0.8142465381694036 0.9556200746945782 1.2801119534429448 1.2385833796068808 1.2611877438750165 1.1270926402256853 1.0176360159655016 1.1160768780782786 1.1532655735610116 0.8961275787997461 1.0 10.51128054035284 -10.887196928454411 1.0580426836848738 0.9978691183985817 1.1172424017014917 0.1427111202601944 0.1359259786964646 1.1563337332676804 2.2300144965363167 0.10548478381427276 0.023529708109024487 1.2965912054851282e-11 10.887196928454411 0.11937328330290997 NEKPTQSVS(ph)SPEATSGSTGSVEKK ddPTM_A549_MK2206_60min_R1 2 NEKPTQSVSSPEATSGSTGSVEKK 24 2 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQSVS(0.571)S(0.426)PEAT(0.001)S(0.001)GS(0.001)TGSVEKK;NEKPT(0.001)QS(0.002)VS(0.555)S(0.441)PEATS(0.001)GSTGSVEKK 110.03 7.6982e-12 15443500.0 1237.45 2075.37 2030.19 1629.6299999999999 2588.1000000000004 1884.38 1689.46 1671.8600000000001 3397.4 2843.3 2520.0 True False 1446.3013072521862 2180.9974683780133 2318.1014697382393 2028.8894231568706 2207.393918435338 2083.7838408497905 1996.4130132755424 1908.8512748565174 2627.894324532977 2200.9965552423896 1894.2144515381708 0.7635362015519083 1.1513994450876268 1.2237798459703741 1.0710980594142014 1.1653347468882702 1.1000781031723639 1.053953004980182 1.0077271204991922 1.3873267213218818 1.1619574296115736 1.0 10.887383957948025 NEKPTQSVSS(ph)PEATSGSTGSVEK ddPTM_A549_MK2206_60min_R1 1 NEKPTQSVSSPEATSGSTGSVEK 23 1 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQSVS(0.121)S(0.879)PEATSGSTGSVEK 138.34 3.4118000000000004e-23 42576000.0 990.36 1602.5 1926.5 1391.7 2169.9 1839.5 1571.9 2017.2 2621.6 2046.4 1772.9 True False 1157.508556022688 1684.0604051690862 2199.706668563396 1732.666562475788 1850.7105844491475 2034.1546690387243 1857.4938829968307 2303.1442774159123 2027.8117858349462 1584.116818713476 1332.6400004492152 0.868583079925942 1.2637024287139902 1.6506383327994838 1.3001760129455284 1.3887550905160415 1.526409734326628 1.3938452112878903 1.7282569010682203 1.5216500969139437 1.1887057406197408 1.0 10.380071387885968 -10.790824209458263 1.087020085327875 1.0046484317452737 1.4213243384663574 0.20842782040727348 0.22244918175732692 0.4601549068947153 0.9820583009193639 0.1415460543093237 0.037183735103911215 1.6187351248095525e-11 10.790824209458263 0.4166759067210837 NEKPTQSVSS(ph)PEATSGSTGSVEK ddPTM_A549_PD325901_60min_R1 2 NEKPTQSVSSPEATSGSTGSVEK 23 1 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQSVS(0.293)S(0.706)PEATSGSTGSVEK;NEKPTQSVS(0.033)S(0.967)PEATSGSTGSVEK 187.75 2.2891999999999994e-50 118892000.0 5466.9 5620.1 5848.299999999999 6692.7 7803.299999999999 6890.5 6716.5 7711.5 7374.700000000001 6332.5 6732.0 True False 6021.89566348093 6093.725550742666 6245.2008066848175 7106.092878775479 7255.223127923571 6834.386052537991 6972.100082909826 7557.688082945283 7064.767005210069 5932.6648692887875 5904.006677664055 1.019967624065005 1.0321339191224754 1.0577902681430837 1.2036051560814012 1.2288643160536077 1.157584404230729 1.1809099249983177 1.2800947721718217 1.1966055241667297 1.0048540242566377 1.0 12.527478637806224 -6.062217566693304 6.906931312889389 1.1346402386441359 1.0303880771739264 0.2693527234166744 0.08333535001444405 0.3372911188455304 31.81975801628704 0.014287305740158547 0.03854612964367055 8.665276662582553e-07 6.062217566693304 -0.10425216147020944 NEKPTQSVSS(ph)PEATSGSTGSVEKK ddPTM_A549_PD325901_60min_R1 2 NEKPTQSVSSPEATSGSTGSVEKK 24 2 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 NEKPTQSVS(0.141)S(0.857)PEAT(0.001)S(0.001)GSTGSVEKK;NEKPTQSVS(0.215)S(0.785)PEATSGSTGSVEKK 118.43 1.5387e-16 30106000.0 1571.8400000000001 1794.04 2308.9 2568.9 2735.1 2833.1 2659.0 2864.7 2391.6000000000004 2916.5 2448.7 True False 1731.4120396725507 1945.2300469839283 2465.5958385436065 2727.5751186047983 2542.9960115827616 2810.0281729113094 2760.189700060631 2807.5613111863236 2291.089369013031 2732.3516922669974 2147.5254235882308 0.8062358753264911 0.9058007069987122 1.1481101976543413 1.2701014333266338 1.1841517607431868 1.3084958818397243 1.2852884858744626 1.3073471821792266 1.0668508711691636 1.27232565549869 1.0 11.068459495545058 -5.642453202018301 4.014177125364897 1.1177510841871532 0.827280846349835 0.4410316746734342 0.1245212389146633 0.18924608941515597 5.398703910449733 0.020739615733138476 0.09234271397473286 2.2779636936515775e-06 5.642453202018301 -0.2904702378373182 NELDS(ph)PHEEK ddPTM_A549_MK2206_60min_R1 4 NELDSPHEEK 10 0 Q8TBZ6 Q8TBZ6 TRMT10A tRNA methyltransferase 10 homolog A 1 NELDS(1)PHEEK;NELDS(1)PHEEK;NELDS(1)PHEEK;NELDS(1)PHEEK 113.25 3.4586e-05 23953600.0 4791.0 4565.82 4520.400000000001 4451.0599999999995 5541.1 5055.39 5234.2 6608.5 6499.1 5406.7 7047.9 True False 5599.603671295989 4798.200735806004 5161.460692745378 5541.569899815674 4726.011530250784 5590.348014303712 6185.1863874177825 7545.275112682455 5027.064226930084 4185.3227148837705 5297.711917855502 1.0569853095301363 0.9057119017049724 0.9742811184860957 1.046030812120657 0.8920854141430663 1.0552382049053866 1.1675203339334328 1.4242516825521838 0.9489123427015308 0.7900245954819636 1.0 12.371153678769527 -6.237034057580765 17.480672181648902 1.0245516705506876 0.9716638512036864 0.021778926014962674 0.15728196153916232 75.15343009592104 53818.926793993385 0.021064384024986546 0.05558017890725424 5.793832591333029e-07 6.237034057580765 -0.052887819347001264 NELDS(ph)PHEEK ddPTM_A549_PD325901_60min_R1 4 NELDSPHEEK 10 0 Q8TBZ6 Q8TBZ6 TRMT10A tRNA methyltransferase 10 homolog A 1 NELDS(1)PHEEK;NELDS(1)PHEEK;NELDS(1)PHEEK;NELDS(1)PHEEK 120.53 5.0513e-05 24541200.0 4989.8 5455.6 5060.8099999999995 5759.210000000001 6524.3 4199.5599999999995 4894.0 4162.030000000001 5562.1 5463.5 5389.4 True False 5496.360822703386 5915.362558429865 5404.266999722758 6114.943321585088 6066.055675613112 4165.360175719682 5080.243848099555 4079.0150466006285 5328.344279723775 5118.533677593255 4726.537966221426 1.1628724580197087 1.2515212192739098 1.1433880439223751 1.2937467899942852 1.283403564927364 0.8812708594509882 1.074834029559461 0.8630027042523786 1.1273249718511105 1.0829350603281422 1.0 12.206568128326316 -7.241877817693567 24.93323872917871 1.0351460165613582 1.227414022310914 0.5993760768043519 0.08854585029898634 503.6285487519151 641926.9912866727 0.01341459180485511 0.02321227100103526 5.729572013177539e-08 7.241877817693567 0.19226800574955583 NELSNS(ph)ILSLQPEPEIPPELPPPRPHVR ddPTM_A549_MK2206_60min_R1 2 NELSNSILSLQPEPEIPPELPPPRPHVR 28 1 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 NELS(0.035)NS(0.964)ILS(0.001)LQPEPEIPPELPPPRPHVR;NELS(0.076)NS(0.909)ILS(0.015)LQPEPEIPPELPPPRPHVR 116.36 1.0897e-20 9844700.0 1706.67 2143.1 1495.32 1918.29 2448.89 1863.12 1950.94 1953.73 2861.4300000000003 2788.77 2605.25 True False 1994.7141719245933 2252.1746360797924 1707.3788609583266 2388.271136115311 2088.6615250249665 2060.274121761037 2305.400544623602 2230.677210547188 2213.3206737647597 2158.784920115117 1958.2945237578638 1.018597635710507 1.1500694143585655 0.8718703138085464 1.2195668767598578 1.066571702920833 1.052075720360735 1.177249140338533 1.1390917880251417 1.1302286999799775 1.1023801036692493 1.0 10.935382044501866 -4.94877648334005 14.828285316503534 1.0767986307423434 0.6840758864801494 0.029199283835214085 0.09137373977483075 3041074.088898963 24802009.80379647 0.012231555371772741 33756431.71886697 1.1251839190247243e-05 4.94877648334005 -0.392722744262194 NELSNS(ph)ILSLQPEPEIPPELPPPRPHVR ddPTM_A549_PD325901_60min_R1 2 NELSNSILSLQPEPEIPPELPPPRPHVR 28 1 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 NELS(0.042)NS(0.957)ILS(0.002)LQPEPEIPPELPPPRPHVR;NELS(0.038)NS(0.916)ILS(0.047)LQPEPEIPPELPPPRPHVR 135.32 1.0066e-27 14404200.0 3865.3 4512.7 4482.299999999999 4037.6000000000004 5175.4 4573.1 4690.9 4937.1 4785.3 4932.6 5309.700000000001 True False 4257.702410516533 4893.001066322026 4786.495832259521 4286.993381945086 4811.897758160738 4535.858189806472 4869.414766458972 4838.625667419979 4584.190482329008 4621.1547941972185 4656.640560961499 0.9143291939280377 1.0507577302276738 1.027886041363521 0.9206193447449401 1.0333410309786033 0.9740623375212606 1.0456926410170553 1.0390807716584645 0.9844415565934228 0.9923795349244319 1.0 12.185073811670811 -5.237428272008763 24.093470689922476 1.0005460908635146 0.9143290289016167 0.32574016482072865 0.03727458833653348 3636.032265415033 3648414.4728818764 0.004779557129557968 0.36127073266997617 5.7885758445941665e-06 5.237428272008763 -0.08621706196189793 NEMGIPQQTT(ph)SPENAGPQNTK ddPTM_A549_PD325901_60min_R1 1 NEMGIPQQTTSPENAGPQNTK 21 0 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 NEMGIPQQT(0.098)T(0.451)S(0.451)PENAGPQNTK 70.917 0.00016921 7659500.0 2312.3 2238.5 2092.8 2478.4 2601.9 3047.5 2056.2 2451.7 2143.3 2544.2 2552.4 True False 2547.042993774707 2427.1462510164324 2234.82999302874 2631.485139145212 2419.15152006771 3022.6821703954047 2134.449816195814 2402.798920178557 2053.2245545265223 2383.5587778041104 2238.470980996693 1.1378494585802585 1.0842875657631847 0.9983734486625634 1.1755725946348998 1.0807160515391483 1.3503334177910749 0.9535302598586456 1.0734107971811617 0.917244213553446 1.0648155808313478 1.0 11.128297900270741 NENPVDYTVQIPPS(ph)TTYAITPMKR ddPTM_A549_MK2206_60min_R1 3 NENPVDYTVQIPPSTTYAITPMKR 24 1 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 NENPVDYTVQIPPS(0.211)T(0.211)T(0.211)Y(0.156)AIT(0.211)PMKR;NENPVDYTVQIPPS(0.211)T(0.211)T(0.211)Y(0.192)AIT(0.176)PMKR;NENPVDYTVQIPPS(0.246)T(0.246)T(0.246)Y(0.093)AIT(0.17)PMKR 79.875 8.0274e-06 11310200.0 5256.6 7621.7 6724.6 6430.5 9728.1 6714.6 6331.8 6537.7 9988.300000000001 9116.7 9281.1 True False 6143.785568468904 8009.611975087189 7678.249397052375 8005.972788676112 8297.10937673615 7425.134515209247 7482.206099853258 7464.438995866553 7725.965998037535 7057.231138176863 6976.346724671001 0.8806594355097281 1.1481097902949937 1.1006117815072438 1.147588143858155 1.1893200989271984 1.0643299148179037 1.0725106413351486 1.069963878009313 1.1074515506397635 1.011594093111775 1.0 12.768256028551694 -10.82800288055224 0.7675584182699653 0.9910823784943986 1.0936800030847156 0.14049714726237073 0.0754485951819917 1.1674814387870347 1.0399324754771164 0.07708085645949615 0.013545549526109733 1.4859257865296186e-11 10.82800288055224 0.10259762459031696 NENPVDYTVQIPPS(ph)TTYAITPMKR ddPTM_A549_PD325901_60min_R1 3 NENPVDYTVQIPPSTTYAITPMKR 24 1 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 NENPVDYTVQIPPS(0.256)T(0.256)T(0.256)Y(0.103)AIT(0.13)PMKR;NENPVDYT(0.001)VQIPPS(0.204)T(0.204)T(0.204)Y(0.182)AIT(0.204)PMKR;NENPVDYTVQIPPS(0.261)T(0.261)T(0.261)Y(0.014)AIT(0.203)PMKR 96.338 4.548999999999999e-08 16062000.0 8186.099999999999 9191.4 8361.9 8966.2 10300.2 8790.3 10242.4 9990.3 8756.7 10447.1 10444.8 True False 9017.146845711686 9965.991535221103 8929.388818189518 9520.021810282356 9576.749485760945 8718.714711214678 10632.180136856332 9791.03562926126 8388.68635124453 9787.468323086763 9160.155815042412 0.9843879326707651 1.0879718354632553 0.9748075249469078 1.0392860124332153 1.0454788847624645 0.951808559511311 1.1606986116324163 1.0688721706221247 0.9157798754327948 1.0684827333410865 1.0 13.161156423560408 -8.754566504652649 24.99921053198889 0.9602293848528631 1.039999535888197 0.014770129637846852 0.06614744387737632 156.3296073874637 568628.2759038483 0.010104853072870509 0.01133362608075036 1.7596791788823335e-09 8.754566504652649 0.07977015103533391 NENPVDYTVQIPPS(ph)TTYAITPMKRPMEEDGEEKS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 NENPVDYTVQIPPSTTYAITPMKRPMEEDGEEKSPSK 37 3 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 2 NENPVDYT(0.001)VQIPPS(0.263)T(0.263)T(0.263)Y(0.252)AIT(0.263)PMKRPMEEDGEEKS(0.466)PS(0.228)K;NENPVDYT(0.002)VQIPPS(0.238)T(0.238)T(0.238)Y(0.224)AIT(0.238)PMKRPMEEDGEEKS(0.656)PS(0.167)K 47.784 0.0030629999999999998 7331400.0 378.05 1385.61 1044.33 1266.54 1589.6 1140.1599999999999 1236.5900000000001 900.3199999999999 1635.23 1766.43 1778.5 True False 441.85559756490295 1456.1316305811774 1192.4316974725202 1576.842356857142 1355.7719457303872 1260.8109744230442 1461.262396319774 1027.9431171143635 1264.8530159257252 1367.3922361610842 1336.849365897077 0.33052010857513553 1.0892264063005015 0.8919716221523231 1.1795213410592604 1.0141546088258138 0.9431211971866343 1.0930643598272654 0.7689296515651742 0.9461447551175376 1.0228469048519253 1.0 10.384621198622595 -5.255639253385628 24.816772263043568 0.9822083759897124 0.33051979496467876 0.765952633426151 0.10536595048307604 189.6873249496202 811581.3242264144 0.013147377511931952 0.16167434047751048 5.550866040755274e-06 5.255639253385628 -0.6516885810250337 NENPVDYTVQIPPS(ph)TTYAITPMKRPMEEDGEEKS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 NENPVDYTVQIPPSTTYAITPMKRPMEEDGEEKSPSK 37 3 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 2 NENPVDYTVQIPPS(0.253)T(0.253)T(0.253)Y(0.238)AIT(0.253)PMKRPMEEDGEEKS(0.596)PS(0.154)K 47.784 0.0030629999999999998 2941900.0 659.74 694.44 918.74 497.08 889.13 783.06 812.2 934.01 825.95 573.44 1031.1 True False 726.7163191250821 752.9628959373924 981.0912212324286 527.7835026494116 826.6805761319813 776.6830189827156 843.1087154528936 915.3804378333292 791.238193818495 537.2329005361177 904.2812366814325 0.8036397192006491 0.8326645134213398 1.0849403719056214 0.5836497333354971 0.9141852585217479 0.858895427083081 0.9323523271885722 1.01227405888972 0.8749912767428556 0.5940993561999324 1.0 9.820627718682365 -7.711468901659916 2.7422389555758926 0.9459253914891106 0.8447275713233106 0.0 0.15629220160948115 0.4048103169272403 6.233841324773076 0.01769491293785495 0.026638707898923236 1.943260837098014e-08 7.711468901659916 -0.10119782016580003 NENPVDYTVQIPPSTTYAIT(ph)PMK ddPTM_A549_PD325901_60min_R1 1 NENPVDYTVQIPPSTTYAITPMK 23 0 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 NENPVDYTVQIPPS(0.156)T(0.156)T(0.156)Y(0.107)AIT(0.426)PMK 75.17399999999999 2.9061999999999997e-05 2412600.0 1032.3 1306.2 1144.5 1440.5 1545.5 1470.7 965.25 1119.0 1119.8 1460.0 1197.7 True False 1137.098336060905 1416.2780581092995 1222.1726524375927 1529.4764133871345 1436.949411685554 1458.7231068090312 1001.9831169550666 1096.6806671614816 1072.7387002093963 1367.815350834841 1050.3904928458464 1.082548198794278 1.3483348028714024 1.1635412361038542 1.4561026816258493 1.368014487443041 1.388743630815698 0.9539148762098668 1.0440694909473334 1.021276094477018 1.30219700211584 1.0 10.03671004813593 -7.764472523008683 24.99999186599902 1.009567995597861 1.3071749345449113 0.41366438821914475 0.13330225169030105 32.86588585866162 270890.2034527733 0.014702502817068685 0.020790255784760174 1.719996158703079e-08 7.764472523008683 0.29760693894705037 NENPVDYTVQIPPSTTYAIT(ph)PMKR ddPTM_A549_MK2206_60min_R1 1 NENPVDYTVQIPPSTTYAITPMKR 24 1 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 NENPVDYTVQIPPS(0.129)T(0.129)T(0.129)Y(0.053)AIT(0.56)PMKR 76.16199999999999 1.8093e-05 3684100.0 1885.6 2055.7 1864.0 1810.6 2518.6 2073.5 2142.6 2173.7 2956.8 3202.1 2696.3 True False 2203.843181506097 2160.3263493953755 2128.343228757938 2254.1970812809227 2148.1172763692466 2292.916393722095 2531.882685736376 2481.828631677061 2287.089521039353 2478.7433860449646 2026.7342959057025 1.087386336708359 1.0659149320952175 1.0501343136382013 1.1122311818745694 1.0598909194504456 1.1313354682723429 1.2492425330992556 1.2245456331847322 1.1284604625577244 1.2230233588351398 1.0 10.984941249093295 -4.457071207681109 16.403310446642074 1.0904062832739543 1.0881056307873218 0.0 0.08298111204080239 0.0 0.0 0.011499113807549914 0.0 3.49083074515993e-05 4.457071207681109 -0.0023006524866324707 NENPVDYTVQIPPSTTYAIT(ph)PMKR ddPTM_A549_PD325901_60min_R1 1 NENPVDYTVQIPPSTTYAITPMKR 24 1 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 NENPVDYTVQIPPS(0.179)T(0.179)T(0.179)Y(0.157)AIT(0.305)PMKR 86.48 7.4792e-07 3889600.0 764.05 808.28 865.39 1332.9 1184.6 1413.4 1357.1 1167.5 1499.0 1285.4 1244.8 True False 841.6157935361177 876.3965922589063 924.1205694128164 1415.2302057644652 1101.3977826481446 1401.8897390112775 1408.7451831336152 1144.2132966139686 1436.0022429129176 1204.239624632264 1091.697491437346 0.7709239969288867 0.8027833709730604 0.8464987569002334 1.2963574771076474 1.0088855120460405 1.284137547266439 1.2904171660950137 1.0481047227721294 1.3153847601337387 1.1030891195387316 1.0 10.092357426575104 -6.161026151973335 5.67817810643996 1.162102178587602 0.7974528131952955 0.6701997121980443 0.11313405954701401 0.12240348977853394 5.686666693972749 0.018643475699269763 0.0504070305330823 6.901982408220274e-07 6.161026151973335 -0.3646493653923065 NENSPDT(ph)QR ddPTM_A549_MK2206_60min_R1 1 NENSPDTQR 9 0 Q9HCS5 Q9HCS5 EPB41L4A Band 4.1-like protein 4A 1 NENS(0.06)PDT(0.94)QR 62.2 0.007723000000000001 9662300.0 0.0 180.37 106.07 96.24799999999999 110.4 0.0 0.0 0.0 137.59 294.78 286.93 True False 0.0 189.5500625774403 121.11232096263655 119.82876432073688 94.16030624599566 0.0 0.0 0.0 106.42608468608117 228.18899326639868 215.6773621348599 0.0 0.8788593327607439 0.5615439643911575 0.5555926831384822 0.4365794597725031 0.0 0.0 0.0 0.49345041886934105 1.0580108686776104 1.0 7.752730946478403 -9.959337550867193 0.9679675430033858 0.9371385808367866 0.334560652315171 0.46344807977540525 0.2872533261673245 0.36533826163882077 0.6952468598914039 0.1117518591766603 0.05967731427196486 1.0981519804485489e-10 9.959337550867193 -0.6025779285216155 NENSPDT(ph)QR ddPTM_A549_PD325901_60min_R1 1 NENSPDTQR 9 0 Q9HCS5 Q9HCS5 EPB41L4A Band 4.1-like protein 4A 1 NENS(0.353)PDT(0.647)QR 74.84100000000001 0.002247 25665000.0 569.86 644.11 449.19 552.53 594.17 370.84 471.92 446.2 601.64 563.21 663.4 True False 627.7117676912405 698.3914102042419 479.6747345989009 586.6585232133242 552.4375489752222 367.82000199161 489.879173844533 437.30019096287134 576.3551630594578 527.6488244819803 581.8060056390868 1.0789021797767941 1.2003853577226165 0.8244582041947135 1.0083404391278277 0.9495219087131891 0.6322038590639449 0.8419974512061345 0.751625433090051 0.9906311682471522 0.9069153968295371 1.0 9.184394378376934 -5.753035613655879 24.997975397307737 0.9339915319796894 1.1396438097493011 0.33532369024803854 0.12293384984761054 190.98930632954267 568106.0801343841 0.01863601990457495 0.06986104756494128 1.7658930053889432e-06 5.753035613655879 0.2056522777696117 NENTEGS(ph)PQEDGVELEGLK ddPTM_A549_MK2206_60min_R1 2 NENTEGSPQEDGVELEGLK 19 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 NENT(0.005)EGS(0.995)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK 204.29 5.9812999999999994e-55 56783000.0 2250.37 2934.3 2704.8 2090.3 3457.3 2795.1 3055.1 2813.0 4174.0 3375.5 3402.9 True False 2630.177439735828 3083.643336591357 3088.3813117727873 2602.4235938371335 2948.735749857617 3090.87562676278 3610.172124145058 3211.7513644511987 3228.5956645083393 2612.972205613434 2557.866014737795 1.0282702161025608 1.2055531129559416 1.2074054285792506 1.0174198252928843 1.1528108715889445 1.208380583249441 1.4114000120976369 1.2556370607161895 1.2622223548481293 1.0215438144758682 1.0 11.32072498010293 -6.987295033399379 24.844042931761376 1.1674896859963615 1.1224459545593337 0.062040907307147286 0.12108825209500892 937.2722597957322 1832785.621035725 0.020917124174124176 0.0395091427085734 1.029686376151062e-07 6.987295033399379 -0.04504373143702778 NENTEGS(ph)PQEDGVELEGLK ddPTM_A549_PD325901_60min_R1 2 NENTEGSPQEDGVELEGLK 19 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 NENTEGS(1)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK 284.27 1.1740999999999996e-126 84089000.0 7690.799999999999 7905.5 7644.5 8363.1 11029.2 9360.2 9435.2 9142.8 9041.8 9773.5 9304.900000000001 True False 8471.564354332277 8571.724229354666 8163.301740112872 8879.66969302183 10254.547040674417 9283.973634564416 9794.26169913955 8960.43968161215 8661.804589706477 9156.39954204406 8160.456288620958 1.038123856645753 1.0503976648103839 1.0003486877928482 1.0881339693472474 1.2566144193399438 1.1376782506034748 1.2002100559985587 1.0980316988042322 1.061436307401659 1.1220450448110186 1.0 12.994434106825334 -9.3100487402801 1.2443593529204073 1.0163172467991597 1.1102147380587306 0.0022552011986431975 0.07626614208979801 0.4422237928046321 1.4238362117801566 0.018142367148322333 0.01522391856207744 4.897238552408106e-10 9.3100487402801 0.09389749125957092 NEPEHRSGGGGIS(ph)PK ddPTM_A549_PD325901_60min_R1 1 NEPEHRSGGGGISPK 15 1 Q96EP1-5 Q96EP1-5 1 NEPEHRS(0.081)GGGGIS(0.919)PK 48.111999999999995 0.022958000000000003 1165100.0 1377.7 1784.2 2141.8 2078.5 1905.2 1762.2 1872.3 2354.2 1921.1 2642.8 1867.0 True False 1517.5630897908645 1934.5607956504443 2287.1554276896777 2206.884224384005 1771.3853245831879 1747.8492274555483 1943.5514010618733 2307.243634165828 1840.362847805208 2475.9331569769297 1637.370835888115 0.9268291925865002 1.1815043686185682 1.3968463206742763 1.3478218715108505 1.0818473651525515 1.0674730422369527 1.1869952477855665 1.4091148954136417 1.123974366385358 1.5121395243576425 1.0 10.677165388702477 -9.579090627699829 1.2885039182717803 1.0279668803039634 1.200873045885815 0.0 0.2026060818943422 0.4489785174918395 1.5264676202272882 0.03724673505020778 0.0278157814409366 2.6357812988866436e-10 9.579090627699829 0.17290616558185157 NEPES(ph)PR ddPTM_A549_MK2206_60min_R1 1 NEPESPR 7 0 Q92620 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 NEPES(1)PR 63.216 0.026695 1586300.0 219.56 421.66 308.12 433.67 233.47 218.28 198.12 86.69200000000001 236.35 358.01 575.78 True False 256.61636027337664 443.12069294452226 351.81604916571695 539.9191694681859 199.12687227583888 241.37824471746274 234.1158394931817 98.9808564831153 182.817102373394 277.13529235125645 432.7979352804158 0.5929241785941315 1.023851217444968 0.8128875405511592 1.2475086534744322 0.4600920107135488 0.5577157953886042 0.5409356662977026 0.22869992764402683 0.4224075197007219 0.6403341369262694 1.0 8.75754980638906 -4.944888055720756 12.970271565721193 0.7073183062615633 4.133227990463795e-05 0.007874657661646856 0.2883696605620994 3691468.7505244436 28621086.874605484 0.044668153546959834 63215742.85536487 1.1353034151634575e-05 4.944888055720756 -0.7072769739816587 NEPES(ph)PR ddPTM_A549_PD325901_60min_R1 1 NEPESPR 7 0 Q92620 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 NEPES(1)PR 54.416000000000004 0.042517 3390000.0 131.91 203.01 336.51 396.75 198.38 267.04 303.66 211.06 208.68 285.47 441.15 True False 145.30140609299045 220.11836516365693 359.3475921990165 421.2563464153738 184.4464731738468 264.86531477682973 315.2159474691279 206.85024272663304 199.9099053042479 267.44537548138493 386.89134668025787 0.3755612715036328 0.5689410400423646 0.9288075199469256 1.0888233867983523 0.4767397222928343 0.6845987046480126 0.8147402369524556 0.5346468575777741 0.5167081327085387 0.6912674004632423 1.0 8.595784651197132 -10.964188402711258 1.2460725675010715 0.9989643425313477 0.6629833639654276 0.027967435555074638 0.21848517810015422 0.5139513375931594 1.4262119247098344 0.14530665851648503 0.034119980213598224 1.0859544199744549e-11 10.964188402711258 -0.33598097856592013 NEPTTRS(ph)PVSSQQSLK ddPTM_A549_MK2206_60min_R1 2 NEPTTRSPVSSQQSLK 16 1 Q8IWJ2 Q8IWJ2 GCC2 GRIP and coiled-coil domain-containing protein 2 1 NEPT(0.308)T(0.223)RS(0.469)PVSSQQSLK;NEPT(0.117)T(0.081)RS(0.801)PVSSQQSLK 82.03399999999999 6.1e-05 21197400.0 5278.700000000001 7478.5 6704.3 6633.799999999999 7660.700000000001 7302.799999999999 6742.1 6529.299999999999 10364.099999999999 9088.3 10103.8 True False 6169.615508175773 7859.123706743848 7655.070551803563 8259.0812978026 6533.821178067929 8075.577448793684 7967.052298844032 7454.848270142625 8016.647898066818 7035.24671790152 7594.7476093061005 0.8123529346276017 1.0348103862087266 1.0079427185208296 1.0874727802254376 0.8603078751506921 1.0633108385192955 1.0490213379943967 0.9815794617069233 1.0555515878162625 0.9263305484017659 1.0 12.8907863061567 NEQEHHAGGDS(ph)QKDIMQR ddPTM_A549_MK2206_60min_R1 6 NEQEHHAGGDSQKDIMQR 18 1 E9PBY3;Q86SF2 E9PBY3 GALNT7 N-acetylgalactosaminyltransferase 7 1 NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR 143.48 4.4741000000000006e-17 268416000.0 8166.699999999999 9643.34 9748.509999999998 8427.380000000001 13060.029999999999 11824.719999999998 10298.0 9812.380000000001 14145.8 13899.259999999998 13076.64 True False 9545.039303354826 10134.144815964586 11130.995305246275 10492.08847831947 11138.91688751713 13076.004021786128 12169.0133005289 11203.314914153454 10941.798886200791 10759.407512544689 9829.349391096068 0.9710753910122694 1.031008707976605 1.1324244222439896 1.0674245121272976 1.1332303333939209 1.3303020883183831 1.2380283593899126 1.1397819396166744 1.1131763101342635 1.09462051702945 1.0 13.262880211777002 -4.22894188006655 16.24268066017129 1.0917535575197792 1.1029995651739544 0.0 0.10077599598785586 0.0 0.0 0.014964755534808857 0.0 5.902800697614309e-05 4.22894188006655 0.01124600765417516 NEQEHHAGGDS(ph)QKDIMQR ddPTM_A549_PD325901_60min_R1 6 NEQEHHAGGDSQKDIMQR 18 1 E9PBY3;Q86SF2 E9PBY3 GALNT7 N-acetylgalactosaminyltransferase 7 1 NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR;NEQEHHAGGDS(1)QKDIMQR 151.84 9.2057e-18 326906000.0 11291.5 11483.7 12240.7 12435.8 13754.500000000002 11976.59 12034.4 12384.480000000001 13385.1 13637.57 13966.599999999999 True False 12437.804767637033 12451.471701048657 13071.427511308726 13203.931122249034 12788.431370449025 11879.056621865751 12492.375677476355 12137.461830963393 12822.570794939094 12776.491502797742 12248.796741572005 1.0154307423049598 1.0165465199360177 1.0671601290390214 1.0779778129091926 1.0440561338605219 0.9698141680764962 1.0198859480684868 0.9909105430551602 1.0468432994254626 1.0430813550391247 1.0 13.580352412840249 -7.045654284421781 24.998653166442512 1.0161935615241404 1.0460679516658447 0.2554897365194416 0.026970989307189226 537.217975029524 294160.73363775614 0.0042878767412407055 0.007427099302560653 9.002139022401862e-08 7.045654284421781 0.029874390141704232 NES(ph)LTATDGLR ddPTM_A549_MK2206_60min_R1 2 NESLTATDGLR 11 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 NES(0.974)LT(0.026)AT(0.001)DGLR;NES(0.617)LT(0.075)AT(0.308)DGLR 96.866 0.00028069 9767700.0 1634.44 1923.7 2124.24 2030.19 2873.0 2067.04 1928.88 2127.95 3192.3 2091.5699999999997 2328.01 True False 1910.293513778546 2021.6081132129616 2425.489173957492 2527.586641138692 2450.3855058400877 2285.7728008098957 2279.3325281728676 2429.593429073561 2469.2491470555765 1619.0828843415482 1749.90086719261 1.0916581330937085 1.155270079073825 1.3860723309708038 1.44441704586028 1.4002996122696225 1.3062298805971748 1.3025495163218201 1.3884177524703962 1.4110794464700318 0.9252426321378223 1.0 10.773057479599366 -10.823260769929005 1.0290069707948999 0.9968167176949548 1.3295710359089035 0.6105450390995215 0.10835351721728546 0.3358114625492108 0.6214046119256785 0.0821374609538735 0.019539237568421648 1.5022396829982755e-11 10.823260769929005 0.33275431821394863 NES(ph)PPQVPVYNNSHK ddPTM_A549_PD325901_60min_R1 1 NESPPQVPVYNNSHK 15 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 NES(1)PPQVPVYNNSHK 74.047 0.00023042 10805000.0 3121.8 3283.6 2443.7 1534.2 2203.6 1694.3 1065.9 1824.6 1870.0 3017.5 2880.9 True False 3438.722837852307 3560.3204957952 2609.5441771618566 1628.9640495789943 2048.8267380073044 1680.5021825433737 1106.4634077828612 1788.2069216289892 1791.4104031001707 2826.9745350302287 2526.567563529765 1.3610254827494923 1.4091530925938196 1.0328416365466866 0.6447340150695337 0.8109131010709929 0.6651324931107769 0.43793145441836756 0.7077613705808674 0.7090292889684153 1.1188992433199678 1.0 11.302963044576806 -5.929998573502522 3.3899685263768116 0.7893897478407643 1.3860914724943165 0.6555745937328809 0.1736041241088381 0.11411621617085987 2.623460365638626 0.025412300370598447 0.08968254783320156 1.1749014140517705e-06 5.929998573502522 0.5967017246535522 NESEDNKFS(ph)DDS(ph)DDDFVQPR ddPTM_A549_PD325901_60min_R1 2 NESEDNKFSDDSDDDFVQPR 20 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 2 NES(0.012)EDNKFS(0.988)DDS(1)DDDFVQPR;NES(0.103)EDNKFS(0.898)DDS(0.999)DDDFVQPR 72.569 0.00015931 15295700.0 2539.1 2214.3999999999996 2515.1000000000004 2164.6 2653.2 3083.3 3204.5 3325.8 2401.1000000000004 2256.3 2689.0 True False 2796.867562813374 2401.0152594374754 2685.7898105249374 2298.3024258367186 2466.8483850430994 3058.190627064858 3326.449001069686 3259.464309960371 2300.190117050171 2113.8368329374334 2358.2700469754363 1.1859827361164403 1.0181256648350605 1.1388813651640772 0.9745713510564118 1.0460415202266249 1.2967940762285024 1.4105462626453542 1.382142097823253 0.9753718069736098 0.8963506260228776 1.0 11.203513216349148 -8.869597826440376 21.18884955860002 0.9883547205621884 1.1751104660420713 0.3423128920677594 0.13645715455094742 3.3967527989266837 650.0700288707723 0.02558655061472501 0.027238692564005008 1.350212653197701e-09 8.869597826440376 0.18675574547988283 NESEDNKFS(ph)DDSDDDFVQPR ddPTM_A549_PD325901_60min_R1 1 NESEDNKFSDDSDDDFVQPR 20 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 NES(0.001)EDNKFS(0.935)DDS(0.064)DDDFVQPR 63.138000000000005 0.00056642 4515200.0 3140.6 2891.6 2995.5 3486.9 3780.4 3814.4 4222.7 3573.2 3693.8 3533.0 4264.1 True False 3459.431400012478 3135.285280071084 3198.7926434048113 3702.277893675528 3514.8777456719936 3783.3367910602874 4383.397159250104 3501.9297228788278 3538.562431535512 3309.9257770544477 3739.642732356996 0.925070026096341 0.838391660503622 0.8553738611786315 0.9900084469678958 0.9398966685399546 1.0116840195255101 1.1721432962895273 0.9364342996133366 0.9462300772526608 0.885091441600971 1.0 11.868684733150179 -6.264668358962602 24.398356707766514 0.9864785710007192 0.8694898262539751 0.3283220783749383 0.07143407925835529 156.5763406472661 1183109.3984591856 0.009305045482726395 0.02251019939613995 5.436653331054802e-07 6.264668358962602 -0.11698874474674414 NESLT(ph)ATDGLR ddPTM_A549_PD325901_60min_R1 1 NESLTATDGLR 11 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 NES(0.494)LT(0.502)AT(0.004)DGLR 84.365 0.00055634 7740900.0 694.56 606.97 856.66 743.96 1044.3 892.2 946.7 828.84 739.37 759.72 1008.9 True False 765.0712198919523 658.1214920614 914.7980991150619 789.912719544251 970.95197063942 884.9342190079667 982.7271865541181 812.3081359875985 708.2968501284345 711.7511495453733 884.8116959440378 0.864671232759497 0.7437983641923113 1.0338901523436923 0.8927466975913608 1.0973543580970366 1.000138473603469 1.110662518430671 0.9180576383779798 0.800505749839492 0.8044097436867402 1.0 9.789226645836651 -5.753723564580406 24.999198810143 0.9431102126531558 0.8042347978950594 0.2433515466331715 0.10297300560203655 219.93920328756542 712583.6631868874 0.015352434887478252 0.057277911280457755 1.7630979295017153e-06 5.753723564580406 -0.1388754147580964 NESLTAT(ph)DGLR ddPTM_A549_PD325901_60min_R1 1 NESLTATDGLR 11 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 NES(0.065)LT(0.266)AT(0.668)DGLR 102.4 0.00024502 4975200.0 989.43 662.91 1134.0 964.59 1168.5 1034.5 1145.4 1031.9 1011.2 973.25 864.25 True False 1089.876205220131 718.7757521828477 1210.9600592959628 1024.1705335571658 1086.4285911061597 1026.0753749873813 1188.98882378693 1011.31794499011 968.7027805427233 911.7988289041155 757.9527289321392 1.437921078212398 0.9483121106978704 1.5976722730480228 1.3512327279302685 1.4333724909689316 1.3537458680741126 1.5686846664726266 1.3342757488516874 1.2780517089865282 1.2029758507350798 1.0 9.565964064738674 -9.956836988324344 0.71437824506799 1.0154962324767716 1.3754948738569268 0.25475847126524964 0.16948884125736535 0.4458728009631315 0.46170376095206456 0.07753335852846982 0.033628192058700664 1.1044931116692319e-10 9.956836988324344 0.35999864138015525 NESS(ph)PAPPDSDADK ddPTM_A549_MK2206_60min_R1 2 NESSPAPPDSDADK 14 0 Q8ND04;Q8ND04-2;J3KTD7 Q8ND04 SMG8 Protein SMG8 1 NES(0.177)S(0.823)PAPPDSDADK;NES(0.116)S(0.88)PAPPDS(0.004)DADK 77.77600000000001 0.00069679 3509900.0 755.8699999999999 878.24 1269.43 1360.4299999999998 1563.9099999999999 1105.44 1318.31 1482.08 2265.1000000000004 1720.9299999999998 1800.02 True False 883.4423767527649 922.9386647336652 1449.4542622758538 1693.7354110720232 1333.8609106990498 1222.4169270683162 1557.82986251896 1692.1693786796418 1752.0584666214297 1332.1707177622063 1353.025355975293 0.652938522438819 0.6821296146873678 1.0712691051019163 1.2518135034144562 0.985835856518425 0.9034693412579611 1.1513678259163436 1.2506560732262741 1.2949191668019437 0.9845866612026246 1.0 10.401973160633627 -5.779364082869153 4.39581377013807 1.129995188048737 0.6564279700313255 0.6418868524781094 0.12339367882993663 0.09174565946620758 4.1240348849203565 0.01967263328360879 0.07275048894565123 1.66201874303031e-06 5.779364082869153 -0.47356721801741164 NESS(ph)PAPPDSDADKLK ddPTM_A549_MK2206_60min_R1 2 NESSPAPPDSDADKLK 16 1 Q8ND04;Q8ND04-2;J3KTD7 Q8ND04 SMG8 Protein SMG8 1 NES(0.143)S(0.857)PAPPDSDADKLK;NES(0.154)S(0.846)PAPPDSDADKLK 103.4 2.9441e-07 30224000.0 7386.5 8163.7 9147.8 7892.7 11674.3 9073.2 8314.0 9119.5 12483.4 10751.1 12408.8 True False 8633.160617413447 8579.197460018016 10445.095594437704 9826.41185431676 9957.025934851696 10033.320001697284 9824.546181840862 10412.217052297445 9655.92983189349 8322.419043036765 9327.3524945424 0.9255746067777393 0.9197891325580178 1.1198349800277534 1.0535049318728298 1.0675082710423702 1.0756878768726665 1.0533049102185619 1.1163100202752945 1.0352272885090756 0.8922595182187402 1.0 13.187251924686736 -5.734946125978204 24.974536011431468 1.0409810019579135 0.9226816797339318 0.3936831456903417 0.05874194167233814 133.2185151132079 125579.80097837103 0.006160791513464461 0.023846390706727016 1.8410003625149707e-06 5.734946125978204 -0.11829932222398176 NESSDSALGDS(ph)ESEDTGHDMTR ddPTM_A549_MK2206_60min_R1 2 NESSDSALGDSESEDTGHDMTR 22 0 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 NESSDS(0.001)ALGDS(0.826)ES(0.132)EDT(0.039)GHDMT(0.001)R;NES(0.002)S(0.004)DS(0.008)ALGDS(0.834)ES(0.107)EDT(0.035)GHDMT(0.009)R 68.942 0.00016104 23243000.0 336.19 178.75 113.95 376.56 524.66 458.49 212.99 277.56 580.64 425.42 522.88 True False 392.9306529436442 187.84761149701976 130.10982345330854 468.8172169044207 447.48320901289907 507.00710747896926 251.687526012784 316.9049799918502 449.1259670915485 329.3173265329781 393.03446524614196 0.9997358697221813 0.4779418298071601 0.33103922164135374 1.192814519741466 1.138534272643642 1.2899812925094258 0.6403701157738471 0.8063032838440394 1.1427139520964875 0.8378840932607262 1.0 8.618512017931703 -6.270292188988787 24.97287595595947 1.0472866191691812 0.5904092543858067 0.35652224085983697 0.2363974227674604 417.2005048770483 1176880.803547996 0.03175313766004518 0.07481328492226445 5.366706082581478e-07 6.270292188988787 -0.4568773647833745 NESSDSALGDS(ph)ESEDTGHDMTR ddPTM_A549_PD325901_60min_R1 1 NESSDSALGDSESEDTGHDMTR 22 0 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 NESSDSALGDS(0.995)ES(0.004)EDTGHDMTR 105.17 1.405e-10 25553000.0 349.27 297.71 279.37 427.88 323.4 537.89 303.5 351.41 276.29 408.82 488.02 True False 384.72763328101576 322.7990665133358 298.3297281882834 454.3091758140139 300.68549966943283 533.5096021768609 315.0498585815724 344.4008518741882 264.6784921243561 383.00703543034246 427.99663381366764 0.8989034092462291 0.7542093582303019 0.6970375573518274 1.0614783853926328 0.7025417396164361 1.24652756593672 0.7361035898210646 0.8046812163109824 0.6184125556454408 0.8948832891921485 1.0 8.741455639673516 -11.238442120695142 1.7266098181894591 1.0000522635146725 0.803770548605377 0.021627027681885957 0.17680421183647838 0.6036686845292683 3.2473010163379703 0.13126932213034714 0.026935625982052347 5.775078332236626e-12 11.238442120695142 -0.19628171490929547 NESSDSALGDSES(ph)EDTGHDMTR ddPTM_A549_PD325901_60min_R1 1 NESSDSALGDSESEDTGHDMTR 22 0 J3KNG8;Q8TF40;A0A087WX11;Q8TF40-3 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 NESSDSALGDS(0.415)ES(0.578)EDT(0.007)GHDMTR 106.28 1.222e-10 23291000.0 524.0 505.69 372.11 529.66 583.78 827.64 500.57 599.96 751.64 430.07 750.59 True False 577.1960942515881 548.3062710192092 397.36362227920705 562.3758952548628 542.7773067316679 820.8999742431669 519.6194652724143 587.9933271404853 720.0511846985094 402.9153068037947 658.2721883820352 0.876834999926514 0.8329476479431543 0.6036463780368507 0.8543212142033897 0.8245484410723142 1.2470524939855865 0.7893687055951507 0.893237383438167 1.0938502300519797 0.6120800998658605 1.0 9.36254043579042 -7.03208413475945 23.26367755603758 1.0246497769181697 0.7886695722463107 0.031182373743273706 0.17734835570792334 192.60021052113277 139651.14971855807 0.018393306778672614 0.031884409778067065 9.287864379283522e-08 7.03208413475945 -0.23598020467185898 NESSNAS(ph)EEEACEK ddPTM_A549_MK2206_60min_R1 1 NESSNASEEEACEK 14 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7EN31 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 NES(0.035)S(0.035)NAS(0.93)EEEACEK 58.071000000000005 0.0083763 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NET(ph)IAQEDKIK ddPTM_A549_PD325901_60min_R1 2 NETIAQEDKIK 11 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 NET(1)IAQEDKIK;NET(1)IAQEDKIK 77.562 0.00044767 19606000.0 5487.7 5756.9 6093.0 6452.7 6520.0 6092.9 5586.4 6189.1 6284.5 5902.4 5843.5 True False 6044.8072641687795 6242.054166842307 6506.507620185452 6851.268623855028 6062.057692778919 6043.2814424945545 5798.993508995373 6065.653545244978 6020.384319937446 5529.721456690113 5124.786544998502 1.1795237150058797 1.218012518576836 1.2696153416448985 1.33688858329943 1.1828897924919701 1.1792259813030557 1.1315580577019073 1.1835914514653705 1.1747580639847324 1.0790149810408796 1.0 12.323276200131815 -11.7026506200669 0.21807337852393807 0.7786325371472607 1.257031889755148 0.6154025834143958 0.052522689814876546 4.209704788348688 0.18269720344881335 0.5504021122169693 0.04623530518197017 1.983121760150823e-12 11.7026506200669 0.47839935260788735 NET(ph)LSNR ddPTM_A549_PD325901_60min_R1 1 NETLSNR 7 0 Q9UBN6 Q9UBN6 TNFRSF10D Tumor necrosis factor receptor superfamily member 10D 1 NET(0.5)LS(0.5)NR 61.765 0.029445999999999996 3188800.0 1195.3 1409.0 1388.3 1360.9 1769.8 1703.6 1692.9 1720.6 1797.1 1479.6 2128.6 True False 1316.6459760666482 1527.7413748859294 1482.5183865260904 1444.9597021718516 1645.4953534785466 1689.72644642678 1757.3242358904265 1686.2812832154125 1721.574136583592 1386.1778034898834 1866.7956943071456 0.7052973070817568 0.8183763116364724 0.7941513852035756 0.7740320521299162 0.8814544400849746 0.9051480307029076 0.9413586292540979 0.9033025351182148 0.9222081140606808 0.742543925785279 1.0 10.866348329559697 -2.3569173930721257 0.1562623168290601 1.018888107757772 2.8717663049091754e-11 0.17600192750018417 0.07987850943338945 12.554707098696765 0.13345235709388245 0.05031100129179672 2.890410734776762 0.004396252283719779 2.3569173930721257 -1.0188881077290544 NETLS(ph)NR ddPTM_A549_PD325901_60min_R1 1 NETLSNR 7 0 Q9UBN6 Q9UBN6 TNFRSF10D Tumor necrosis factor receptor superfamily member 10D 1 NET(0.153)LS(0.847)NR 84.615 0.013977000000000002 3382200.0 1054.7 974.0 785.31 758.38 1235.8 1328.4 1071.7 1088.1 1102.9 1229.8 1213.1 True False 1161.7723675708964 1056.082398253297 838.6058590526574 805.2234101940545 1149.0016712785555 1317.5819508296165 1112.4841299567427 1066.3969919020635 1056.5489484380632 1152.1502181210192 1063.89639047449 1.0919976587689657 0.9926553071416023 0.788240158121643 0.756862620649489 1.0799939557705511 1.2384494981151168 1.0456696158735748 1.0023504181891794 0.9930938368602322 1.082953404520123 1.0 10.055141942806687 -6.797311685596209 24.99944202122356 1.0242605587842313 0.9050111050887052 0.2774220818678591 0.11002286057482309 218.78240246956432 152469.03435056383 0.01678406655735468 0.031719673290528105 1.5947342234241353e-07 6.797311685596209 -0.11924945369552609 NEVNGTSEDIKS(ph)EGDTQSN ddPTM_A549_MK2206_60min_R1 2 NEVNGTSEDIKSEGDTQSN 19 1 O95232 O95232 LUC7L3 Luc7-like protein 3 1 NEVNGTSEDIKS(0.921)EGDT(0.018)QS(0.06)N;NEVNGTSEDIKS(1)EGDTQSN 154.12 1.8699e-26 3660400.0 660.8 674.94 803.11 960.86 1358.8 830.36 908.31 1553.1 1296.5 1074.1 915.12 True False 772.3268849911061 709.2915630981732 917.0030742745645 1196.2707431346446 1158.9223199914757 918.2281440516417 1073.3381696449214 1773.25668116927 1002.8448200850652 831.4600640051518 687.8704479728616 1.1227795688376143 1.0311412057145923 1.3331043323302396 1.7390930903632027 1.6847973675955887 1.3348852923652106 1.5603783718402562 2.577893390237968 1.457897810613068 1.2087451444606256 1.0 9.425993066233293 -10.141220037590886 1.165344839095983 1.0582942389452556 1.538129995937517 0.14767621242083084 0.39290191923069046 0.5335739633529013 1.4485106653865003 0.14411707305838228 0.07515597044812936 7.224037012190399e-11 10.141220037590886 0.47983575699226133 NEVNGTSEDIKS(ph)EGDTQSN ddPTM_A549_PD325901_60min_R1 2 NEVNGTSEDIKSEGDTQSN 19 1 O95232 O95232 LUC7L3 Luc7-like protein 3 1 NEVNGTSEDIKS(1)EGDTQSN;NEVNGTSEDIKS(0.999)EGDT(0.001)QSN 185.13 1.5665999999999995e-43 7827100.0 2177.13 2535.11 2988.8 2466.8999999999996 3442.2 2811.9 2523.2 2476.5 3129.8999999999996 2972.3999999999996 2848.02 True False 2398.1506348816038 2748.7526166693183 3191.6379411144403 2619.2748102636046 3200.4317469453326 2789.0008186824753 2619.2217567480175 2427.1042647233335 2998.361187520439 2784.7221567270412 2497.73159508627 0.9601314407038092 1.1004995981461243 1.2778146168280358 1.0486614396104226 1.2813353337249962 1.1166135000931297 1.048640198931203 0.9717234107532291 1.200433702892275 1.1149004809825689 1.0 11.286402738692498 -7.528439066707791 24.046633899138154 1.082736397047256 1.1415125820360768 0.07747521125376133 0.10293426580886571 233.638954099821 1010409.2289406416 0.017184665975824017 0.025538570369655258 2.9618354938781172e-08 7.528439066707791 0.058776184988820646 NEVNGTSEDIKSEGDT(ph)QSN ddPTM_A549_MK2206_60min_R1 2 NEVNGTSEDIKSEGDTQSN 19 1 O95232 O95232 LUC7L3 Luc7-like protein 3 1 NEVNGTSEDIKSEGDT(0.5)QS(0.5)N;NEVNGTSEDIKS(0.003)EGDT(0.499)QS(0.499)N 118.53 1.8326e-13 8490000.0 1106.51 1743.81 1380.9 1504.9299999999998 1784.03 2070.87 1700.6399999999999 1611.5 2312.7 2101.0 1890.33 True False 1293.2618364278287 1832.5624805852756 1576.7323844376813 1873.6379175588759 1521.601550290251 2290.008088867746 2009.6242745592806 1839.9350600117689 1788.8771426230085 1626.3826407921283 1420.90889054609 0.9101652083623718 1.2897114605856093 1.1096646624764972 1.318619321777057 1.0708649656667728 1.6116501938330754 1.4143231053941345 1.2949000968701356 1.258966816609543 1.14460726624567 1.0 10.472598335814668 -10.46727843549909 0.8924848400014452 1.006750736444467 1.2612557759771859 0.11488649773309534 0.1788116180806872 0.6478926925709202 0.9609849160520533 0.09994597002645915 0.03213507541123118 3.4097423564109147e-11 10.46727843549909 0.25450503953271886 NEYPEEES(ph)SDGDEDSR ddPTM_A549_PD325901_60min_R1 2 NEYPEEESSDGDEDSR 16 0 Q96CW6;I3L4S1 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 1 NEYPEEES(0.5)S(0.5)DGDEDSR;NEY(0.005)PEEES(0.498)S(0.498)DGDEDSR 96.303 5.0091e-06 5119500.0 397.96000000000004 340.34000000000003 602.38 687.5 683.98 336.77 351.45000000000005 633.02 456.78999999999996 385.95 664.8900000000001 True False 438.36060623733187 369.0216462233339 643.2611292052053 729.9653135742136 635.9396044029021 334.0274567757378 364.8246220708195 620.3939195054165 437.59270483001455 361.5810511333607 583.1127450849754 0.7517596038369061 0.6328478486086896 1.1031505221369577 1.251842494829774 1.090594588719251 0.5728351156637143 0.625650228272158 1.0639347617329276 0.7504427034367863 0.6200877174802079 1.0 9.187631045840442 -5.733863139055056 24.986920395270836 0.903947528094286 0.692303590899761 0.11488080055373595 0.21922735282563735 351.3846069981697 318385.53224476025 0.02954689466926495 0.11438050502068031 1.8455969378395894e-06 5.733863139055056 -0.211643937194525 NFDEILR ddPTM_A549_MK2206_60min_R1 1 NFDEILR 7 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 75.109 0.050638 2582700.0 521.11 638.32 700.33 531.69 970.09 677.22 753.94 606.51 1176.4 600.7 879.23 False True 609.0606280837094 670.8077615148399 799.647324783287 661.9540738684711 827.3910460704528 748.8829708977466 890.9211388425671 692.4846498589754 909.9472783247751 465.00145279573115 660.8929254864705 0.9215723222266173 1.0150021821175816 1.2099498934637287 1.0016056282963228 1.2519290404893142 1.133138125735736 1.3480567040217253 1.0478015774631735 1.3768452395748985 0.7035957488173331 1.0 9.368272742320556 -4.944094892010261 0.8257583072420298 1.1817192611403062 0.6169170147850634 0.011830613380743094 0.18772868829147135 4.200539622356751 1.4607707367355325 0.02306769291607378 2.4432610208296763 1.1373787449096629e-05 4.944094892010261 -0.5648022463552428 NFDEILR ddPTM_A549_PD325901_60min_R1 2 NFDEILR 7 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 ; 119.27 0.018769 7975000.0 2847.0 2387.3999999999996 3118.9 3679.6 3806.7 3512.7 3557.0 3358.5 3773.1 3164.3999999999996 4253.1 False True 3136.0253441493746 2588.5945765810297 3330.5673094692957 3906.880535022076 3539.3305244020717 3484.093735831971 3692.363581465084 3291.51208280772 3614.52972830869 2964.5992439601155 3729.995662622251 0.840758442583468 0.693993991071079 0.8929145261064056 1.047422272945881 0.9488832815193843 0.9340744737978042 0.9899109584672516 0.8824439437802806 0.9690439494419181 0.7947996491438146 1.0 11.8649582375241 -5.966211951684862 5.612361979543297 0.9750769772602896 0.7700751505692124 0.42244617492067416 0.07414392017637805 0.06336006054464309 5.38536083480641 0.006552397305426796 0.020610177442074048 1.0809063005107228e-06 5.966211951684862 -0.20500182669107725 NFDFEGSLS(ph)PVIAPK ddPTM_A549_MK2206_60min_R1 1 NFDFEGSLSPVIAPK 15 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 NFDFEGS(0.004)LS(0.996)PVIAPK 191.15 8.683200000000001e-34 21997000.0 6162.8 7101.4 7229.6 7191.6 10154.0 7643.9 7147.8 6981.0 12186.0 8902.2 7792.3 True False 7202.929974006033 7462.83092746817 8254.86599068047 8953.54232284319 8660.360050922462 8452.77242438983 8446.462737378179 7970.578128415864 9425.890457043277 6891.186837153583 5857.256853460672 1.229744597891467 1.2741170677975082 1.4093399345810158 1.5286238160365333 1.4785692803971229 1.4431281802838538 1.4420509376138617 1.3608039271329835 1.6092670498945478 1.1765211957679522 1.0 12.516009445814122 -10.943951743405533 1.180382636470525 0.9978747754254331 1.4365300795376328 0.5427480709640518 0.11320671892247197 0.23380858411444413 0.5743529007252172 0.08384415228488296 0.01921256204736689 1.1377537002057951e-11 10.943951743405533 0.43865530411219966 NFDFEGSLS(ph)PVIAPK ddPTM_A549_PD325901_60min_R1 2 NFDFEGSLSPVIAPK 15 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 NFDFEGS(0.096)LS(0.904)PVIAPK;NFDFEGS(0.002)LS(0.998)PVIAPK 216.77 9.2324e-46 74616000.0 26281.0 23599.0 28123.0 29662.0 33901.0 35044.0 34162.0 36733.0 38860.0 34814.0 37423.0 True False 28949.027772950372 25587.7705506977 30031.595897337196 31494.15437271032 31519.910712100922 34758.613282801176 35462.053604163695 36000.331498518986 37226.84933929017 32615.838098605574 32820.20824394266 0.8820488754300712 0.7796346190283607 0.9150336790711822 0.959596421162956 0.9603811919114889 1.0590613266208107 1.0804944728133654 1.0968952796075953 1.1342660918722478 0.9937730393476463 1.0 15.002296772317901 -6.578049395601283 1.0109224805894523 1.0694393743672899 0.8301803147861496 0.7536906368180147 0.049304875569417664 0.23037209126512026 0.43229270910636286 0.009122193521842624 0.03574960547867505 2.642108233248033e-07 6.578049395601283 -0.23925905958114024 NFDLRPGVIVR ddPTM_A549_PD325901_60min_R1 1 NFDLRPGVIVR 11 1 P31153-2;P31153;Q00266 P31153-2 MAT2A;MAT1A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase isoform type-1 0 71.555 0.0024760999999999997 2396000.0 1815.8 1558.6 1518.7 1447.2 2125.8 2203.2 1814.1 2055.6 2570.6 1559.4 1693.2 False True 2000.1386792786907 1689.948691907176 1621.7681146849914 1536.590257170331 1976.4911416118741 2185.257869668632 1883.1365682136095 2014.5994454129952 2462.5666215022984 1460.939217871131 1484.9471340791417 1.3469426846087917 1.138053101772651 1.0921386206053028 1.0347777519522368 1.3310178498964227 1.4716065101023095 1.2681505792335135 1.3566809209422166 1.658353058494171 0.9838324774956391 1.0 10.536195854907334 -6.788413054741071 23.108498678558487 1.3313301040613301 1.14756636658169 0.09299955517075531 0.1948017847496658 161.28234919798825 138171.13600172376 0.03531575684779632 0.06676035343060018 1.627747156145034e-07 6.788413054741071 -0.18376373747964014 NFDT(ph)LDLPK ddPTM_A549_MK2206_60min_R1 2 NFDTLDLPK 9 0 C9JJX6;E9PDC3;O00192-2;O00192 C9JJX6 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome 1 NFDT(1)LDLPK;NFDT(1)LDLPK 100.72 0.00080882 2714400.0 2128.13 1962.52 1982.87 2015.99 3316.1000000000004 2599.7 2376.4 2589.6 3592.4 2889.5 2554.5 True False 2487.306316216894 2062.403885399336 2264.0707821927313 2509.907640501229 2828.306082811107 2874.7985284588026 2808.1611193801573 2956.683730317392 2778.7271358839866 2236.759943155096 1920.1471493866097 1.2953727619320548 1.0740863720044427 1.1791131647988478 1.3071433828928256 1.4729631964480474 1.4971761562009223 1.4624718320558001 1.5398214304887536 1.4471428071393644 1.1648898595452064 1.0 10.907001159960444 -3.6784422189394506 15.85472705730727 1.2803792787332837 1.258904480769615 0.0 0.1804213530062991 0.0 0.0 0.02990956055192819 0.0 0.00020968037326830788 3.6784422189394506 -0.02147479796366869 NFDT(ph)LDLPK ddPTM_A549_PD325901_60min_R1 2 NFDTLDLPK 9 0 C9JJX6;E9PDC3;O00192-2;O00192 C9JJX6 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome 1 NFDT(1)LDLPK;NFDT(1)LDLPK 100.72 0.00080882 3695100.0 1138.1 1361.3 1521.3 1325.0 1855.0 1446.4 1343.3 1770.7 1830.5 1382.6 1854.1 True False 1253.6390741750622 1476.0215284827657 1624.5445663200612 1406.842240706667 1724.7111994025906 1434.6209979523924 1394.4200165819657 1735.3819994127227 1753.570450735221 1295.3024000440082 1626.0574541082767 0.7709684986884752 0.9077302433278471 0.9990695975813196 0.8651860591716752 1.060670516312362 0.8822695620796085 0.8575465848755387 1.0672328920655507 1.0784185062494436 0.796590794975536 1.0 10.667162518269802 -8.269484366922848 24.93275448693016 1.0403307962946748 0.9132788135823967 0.030005690382170935 0.10399218362430888 440.9377249709646 1366537.1276782078 0.012108679670504196 0.014770196301588318 5.376697869992467e-09 8.269484366922848 -0.12705198271227813 NFEDVAFDEK ddPTM_A549_PD325901_60min_R1 1 NFEDVAFDEK 10 0 H7BZ94;P07237;H0Y3Z3 H7BZ94 P4HB Protein disulfide-isomerase 0 105.46 0.00088258 3249000.0 2970.2 2938.1 3383.1 3844.0 4083.0 3745.7 3630.2 3887.9 4724.5 3972.7 3647.4 False True 3271.7325174543253 3185.703998262848 3612.697510232957 4081.4351496425857 3796.2241655853218 3715.1962610828746 3768.349247521661 3810.352784501452 4525.945694891314 3721.863044014776 3198.7929227735985 1.022802224602111 0.9959081676036092 1.1293939925002934 1.2759297798194666 1.1867677143332256 1.1614369391131185 1.1780535153410971 1.1911845738353029 1.4148917432788903 1.1635210949471637 1.0 11.64331188575671 -5.912219105437847 3.9390329156575388 1.1995737081067854 1.0103284394497862 0.3690972655555349 0.0935474281175256 0.2606322242117496 7.6770913832123515 0.019935854558071668 0.06821382258325831 1.2239985252992018e-06 5.912219105437847 -0.1892452686569992 NFEES(ph)PER ddPTM_A549_MK2206_60min_R1 2 NFEESPER 8 0 Q6MZP7-3;Q6MZP7;Q6MZP7-4;Q6MZP7-2 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 NFEES(1)PER;NFEES(1)PER 63.623999999999995 0.009804 8405500.0 786.63 1153.04 1337.6 878.5899999999999 1578.8400000000001 973.0 1185.28 1050.5 1852.6399999999999 1512.1799999999998 1381.2 True False 919.3939127429694 1211.7248109679651 1527.2917933404601 1093.844589441404 1346.5947274767016 1075.962214174873 1400.6300334871717 1199.411592021324 1433.0199980581538 1170.5774877453787 1038.2099208192544 0.8855568554165549 1.1671289078145097 1.47108187151137 1.0535871094144893 1.2970351183064208 1.0363628709363788 1.3490817275006681 1.15526886034268 1.3802796229565535 1.12749595652262 1.0 10.01988246352677 -5.274618383683151 5.208559186536331 1.200503138023071 0.8743905547011016 0.2843033723999663 0.14565491921833387 0.1641086333530269 14.625670466432803 0.022212936972546546 0.18569986677454786 5.313511395516953e-06 5.274618383683151 -0.32611258332196946 NFEES(ph)PER ddPTM_A549_PD325901_60min_R1 2 NFEESPER 8 0 Q6MZP7-3;Q6MZP7;Q6MZP7-4;Q6MZP7-2 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 NFEES(1)PER;NFEES(1)PER 61.343999999999994 0.010877 10428600.0 1438.81 1428.5700000000002 1602.9 1657.52 1926.95 1747.44 1550.3600000000001 1965.08 1650.26 1384.33 1699.68 True False 1584.8769320040599 1548.9606074668511 1711.6824330207223 1759.9012458989555 1791.607679616616 1733.2094280018864 1609.3597981895448 1925.8849378245611 1580.9053111337375 1296.923167548764 1490.6301351592447 1.0632261448509805 1.0391314189427514 1.1482945317202127 1.1806424708507215 1.201912961074826 1.1627360718940027 1.0796506525863414 1.2919938302594547 1.060561754284438 0.8700502807225302 1.0 10.541706615813622 -8.977561872878718 17.853521451107305 1.0267150989502711 1.14586550550438 0.4315219349926167 0.08194130842650085 4.9499230972364865 3939.050449248536 0.012134993380438773 0.012514538300209353 1.053023654723251e-09 8.977561872878718 0.11915040655410891 NFEES(ph)PERK ddPTM_A549_MK2206_60min_R1 2 NFEESPERK 9 1 Q6MZP7-3;Q6MZP7;Q6MZP7-4;Q6MZP7-2 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 NFEES(1)PERK;NFEES(1)PERK 62.258 0.0030371 81028000.0 5870.1 9203.9 8371.0 8003.3 11312.099999999999 8652.3 8520.7 8592.6 12617.1 11670.7 9209.5 True False 6860.829369833978 9672.339196964584 9558.133673783635 9964.108859281787 9648.105075048263 9567.880643068083 10068.800896272727 9810.627363733875 9759.346995368516 9034.280764346833 6922.526980730466 0.9910874148893563 1.397226652043176 1.380728988184465 1.4393745068842438 1.3937258896794062 1.3821369955944152 1.4544978913480906 1.4172031963245098 1.4097954435619562 1.3050553344890734 1.0 12.75708305620701 -10.673018560729002 0.8725018925788164 0.9930657755289716 1.3731931491459157 0.11897863438245071 0.14958510571992525 0.35400953734625984 0.466120740964213 0.08745074114174294 0.0215829090335187 2.1231537214437665e-11 10.673018560729002 0.38012737361694415 NFEES(ph)PERK ddPTM_A549_PD325901_60min_R1 2 NFEESPERK 9 1 Q6MZP7-3;Q6MZP7;Q6MZP7-4;Q6MZP7-2 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 NFEES(1)PERK;NFEES(1)PERK 85.554 0.00052868 104470000.0 13950.3 13767.5 15807.3 17662.9 20391.2 17309.0 18190.1 19550.7 19030.9 16054.599999999999 18159.2 True False 15366.524186331935 14927.735542045451 16880.078435016818 18753.897217643607 18958.992457821074 17168.041242780662 18882.334209504657 19160.74595127256 18231.097454737464 15040.909816104819 15925.733520653153 0.9648864315357273 0.9373342535643048 1.0599247069609716 1.17758451711645 1.1904627459221433 1.0780063110133316 1.18564926287491 1.2031311415844117 1.1447571586636571 0.9444406310452916 1.0 13.959072202407008 -5.87289893033737 4.325747266113297 1.103422129391785 0.9514771986599934 0.38060358760864765 0.07906785661264197 0.17956303312961963 5.848477478659028 0.01150732270335838 0.03915726894576841 1.3399884952729604e-06 5.87289893033737 -0.1519449307317916 NFILDQTNVSAAAQR ddPTM_A549_PD325901_60min_R1 2 NFILDQTNVSAAAQR 15 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 158.81 4.0013000000000003e-19 7899300.0 5010.8 5058.1 5009.2 6413.9 6888.4 7048.700000000001 6888.4 6084.9 6783.0 6477.9 6515.0 False True 5519.492727244003 5484.363838403494 5349.154434766614 6810.072035976217 6404.582547689918 6991.2977241890385 7150.541831477111 5963.531895988291 6497.934098517895 6068.884288474669 5713.696301987714 0.9660108685377361 0.9598626788223871 0.9361985923028003 1.191885545895586 1.1209175653003913 1.2236033129301718 1.2514739064779379 1.0437257391355683 1.137255771934773 1.0621643097067288 1.0 12.48020863993177 -6.241912382088381 24.69648000674705 1.1000918334463936 0.9546078876053072 0.4859790655727476 0.076004266123375 639.0970283418219 808286.9381513235 0.012788670554094547 0.03377923265338646 5.729116029238253e-07 6.241912382088381 -0.14548394584108637 NFITAEELR ddPTM_A549_PD325901_60min_R1 2 NFITAEELR 9 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 144.77 9.201200000000001e-05 5856700.0 2823.3 3045.0 2633.8 3075.7 3408.6 3134.1 2793.3 2488.3 2939.2 3058.3 2967.8999999999996 False True 3109.91933759639 3301.612836428428 2812.545506326022 3265.6790035784866 3169.191695031627 3108.576928707544 2899.6005600524118 2438.668904466414 2815.675645343326 2865.198416067258 2602.867115068202 1.194805266697183 1.2684523221777755 1.0805567022780285 1.2546468410443292 1.217577215788285 1.194289524314072 1.1140025333089025 0.9369164066612422 1.081759275778298 1.1007855143585317 1.0 11.345885943954706 -7.940245790331791 3.6687975612332546 1.0316473338513361 1.2020686224923285 0.6381953310041188 0.0603559209256362 0.10446878185888747 2.88841964689874 0.009100133353555891 0.012657287959722903 1.1475040041773631e-08 7.940245790331791 0.17042128864099237 NFKPS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 NFKPSPSK 8 1 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 NFKPS(0.995)PS(0.005)K;NFKPS(0.884)PS(0.116)K 50.123000000000005 0.0097139 29981300.0 4353.200000000001 6039.9 6230.6 5775.3 8311.9 5914.9 6861.9 6703.799999999999 8688.4 7416.799999999999 7259.0 True False 5087.9137344783385 6347.305111501255 7114.192768830049 7190.248759263073 7089.23052070735 6540.8107920071425 8108.618408127718 7654.084179526461 6720.4912725237855 5741.339728808692 5456.389961791894 0.9324688612995419 1.1632792296642929 1.3038277723269118 1.3177666570044373 1.299252907205926 1.1987432785795833 1.4860775100218138 1.4027744045282347 1.2316735643133463 1.0522231308634729 1.0 12.413731040431575 -10.215640078647649 0.9303224130724235 1.0176271774098413 1.2666465698047011 0.2997561327892323 0.13587261673524445 0.4553707703534098 0.7765217764392632 0.06293188834248244 0.026754891556594024 6.086392017807435e-11 10.215640078647649 0.24901939239485982 NFKPS(ph)PSK ddPTM_A549_PD325901_60min_R1 3 NFKPSPSK 8 1 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 NFKPS(0.928)PS(0.072)K;NFKPS(0.996)PS(0.004)K;NFKPS(0.636)PS(0.364)K 61.398 0.0034313000000000004 103453900.0 13741.900000000001 12837.4 13014.5 13907.3 18443.1 13836.8 14187.6 14879.099999999999 14951.0 14260.9 14513.5 True False 15136.96757174791 13919.252750859217 13897.742232546136 14766.322335230052 17147.72028124093 13724.11768837642 14727.516881752614 14582.32467807185 14322.66146350302 13360.464340219583 12728.431508656748 1.1892248908636613 1.0935560081690017 1.091866049881647 1.1601054163812181 1.347198220737455 1.0782253633562389 1.157056694042488 1.1456497737489688 1.125249521416839 1.0496552015174048 1.0 13.635767030202727 -10.19454610303512 0.5434719393147194 0.9904052957122612 1.1607961629126602 0.3405688434048252 0.06985605020740428 0.756745053001229 0.40048344997538754 0.0610528711166175 0.017067758403837563 6.389309072955263e-11 10.19454610303512 0.17039086720039898 NFKPSPS(ph)K ddPTM_A549_MK2206_60min_R1 1 NFKPSPSK 8 1 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 NFKPS(0.343)PS(0.657)K 48.74100000000001 0.0097139 21773000.0 5153.9 6448.4 7199.0 7214.7 9125.6 6955.0 7015.4 8699.3 9440.1 8160.5 7489.5 True False 6023.752319242832 6776.596016656683 8219.926450551711 8982.301823880194 7783.236328609221 7690.9734836446405 8290.00737119153 9932.452415488917 7301.932422742019 6317.037382286611 5629.650450315527 1.0700046783375716 1.2037329984274374 1.460113114143882 1.5955345546146225 1.3825434451570595 1.3661547109401049 1.4725616526914023 1.7643106802363242 1.297048988597998 1.1221011744934462 1.0 12.458829631611994 -9.872475898342234 1.0366469348869443 1.044124068644745 1.4104047660428363 0.34553262085481284 0.17861532953146955 0.33759472119517564 0.7397517697947336 0.06162655879931966 0.03621731739263354 1.3412943699704163e-10 9.872475898342234 0.3662806973980912 NFQKELS(ph)DLEEENR ddPTM_A549_PD325901_60min_R1 1 NFQKELSDLEEENR 14 1 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 NFQKELS(1)DLEEENR 70.555 0.00064071 5740300.0 2202.4 2533.3 2352.0 2837.0 2980.2 2688.7 2336.4 2805.3 3009.0 2868.2 3253.2 True False 2425.9860266788123 2746.790081617125 2511.6208637249597 3012.2350467055207 2770.8810331318587 2666.804118635642 2425.3129805271383 2749.3460907847243 2882.542194079367 2687.101362509926 2853.077023733914 0.8503051289880167 0.9627465570566028 0.8803200344160076 1.0557846919825922 0.9711904060359077 0.9347115750648434 0.8500692271367609 0.9636424351371231 1.0103275060926646 0.9418257341658549 1.0 11.478302980147781 -8.586422825394434 5.103058166956352 1.00453124005331 0.9335655095704731 0.11891919483943159 0.058777292333574205 0.2066396429916758 10.673563637902122 0.00926459575842712 0.010553338832322243 2.5916549203585264e-09 8.586422825394434 -0.07096573048283683 NFQKPGT(ph)WRGSLDESSLGFGYPK ddPTM_A549_MK2206_60min_R1 2 NFQKPGTWRGSLDESSLGFGYPK 23 2 Q2KJU6;Q9BUZ4 Q2KJU6 TRAF4 TNF receptor-associated factor 4 1 NFQKPGT(0.492)WRGS(0.492)LDES(0.007)S(0.01)LGFGYPK;NFQKPGT(0.497)WRGS(0.497)LDES(0.002)S(0.003)LGFGYPK 91.81299999999999 3.0017e-07 11800300.0 2597.7 3073.1 3285.1 2404.49 5006.700000000001 3528.3 3179.8 3465.8999999999996 5263.4 4232.8 5458.5 True False 3036.1282523326236 3229.507663728625 3750.97657767849 2993.590157941659 4270.221062335385 3901.6623641040096 3757.528500002114 3957.2019388735894 4071.248303922663 3276.607540192727 4103.003803063932 0.7399769529985287 0.7871081331479585 0.9142025593243261 0.7296094036535344 1.0407548389661698 0.9509282836127109 0.915799419244059 0.9644646041806093 0.9922604265885508 0.7985874977122638 1.0 12.002464776123569 -5.046361160535322 0.3535150356492385 1.002106363766626 0.4931926780717231 0.2848085473711085 0.08935193252705262 3.114578842554649 0.23616136957227282 0.01737183348612056 0.6949224059099534 8.987498677079142e-06 5.046361160535322 -0.508913685694903 NFQKPGTWRGS(ph)LDESSLGFGYPK ddPTM_A549_PD325901_60min_R1 2 NFQKPGTWRGSLDESSLGFGYPK 23 2 Q2KJU6;Q9BUZ4 Q2KJU6 TRAF4 TNF receptor-associated factor 4 1 NFQKPGT(0.152)WRGS(0.848)LDESSLGFGYPK;NFQKPGT(0.318)WRGS(0.682)LDESSLGFGYPK 152.99 9.0595e-29 21455000.0 4522.5 4561.4 5288.7 5323.9 4809.299999999999 5879.9 5443.700000000001 6185.700000000001 7181.0 6455.6 7180.200000000001 True False 4981.6208707114665 4945.80518623469 5647.622985536652 5652.745211545829 4471.511359184299 5832.016043874633 5650.862982406944 6062.321360912226 6879.207542600173 6047.99231428041 6297.080919037945 0.7911000247194772 0.7854123600797399 0.8968636512931271 0.8976770799396753 0.7100927265624923 0.9261459585571972 0.8973781749131899 0.9627193042071333 1.0924438848804192 0.9604437980137008 1.0 12.620467491118388 -8.130682297397028 1.4517805556435723 1.0429674044957533 0.828382436058744 0.5977670488825071 0.06522518631804 0.16271882393317835 0.6751553797608907 0.011370139993871433 0.015535826410051386 7.4014652183461825e-09 8.130682297397028 -0.21458496843700936 NFS(ph)FMNPGMER ddPTM_A549_MK2206_60min_R1 2 NFSFMNPGMER 11 0 A0A087X0I9;Q04759-3;Q04759-2;Q04759 A0A087X0I9 PRKCQ Protein kinase C;Protein kinase C theta type 1 NFS(1)FMNPGMER;NFS(1)FMNPGMER 55.31399999999999 0.006130699999999999 8523300.0 3372.5 3166.8999999999996 2755.8 3028.7 4689.700000000001 3587.7 3485.1000000000004 2970.8 5241.200000000001 4391.8 4341.5 True False 3941.695550291323 3328.0816830764315 3146.61387865404 3770.731635963509 3999.8513424080234 3967.348032677484 4118.297558134907 3391.919997693429 4054.07656847655 3399.6893297624306 3263.385730695622 1.2078546257083476 1.0198247947744195 0.9642175759539492 1.15546611621659 1.225675317749035 1.2157153214713008 1.2619708174237352 1.039386783422139 1.2422915655797713 1.0417675415396739 1.0 11.6721538080624 -4.915050822136224 17.985685707764823 1.1226988886467848 4.079734536203048 0.05735984539069361 0.10369280875713631 399.8959792691584 86822.6899034683 0.015842381534216705 1210.7100958207645 1.2160436880985704e-05 4.915050822136224 2.9570356475562636 NFS(ph)GPR ddPTM_A549_MK2206_60min_R1 2 NFSGPR 6 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 NFS(1)GPR;NFS(1)GPR 90.37 0.037596 35473000.0 5410.6 7383.3 7397.0 7885.0 11327.0 9031.2 8624.2 9547.9 12438.4 10339.099999999999 10339.8 True False 6323.777003530384 7759.078433375923 8446.005827855404 9816.825353971099 9660.813304786167 9986.87558957462 10191.10550654703 10901.34406421742 9621.122260043263 8003.490129183193 7772.142296037451 0.8136465806544095 0.9983191426296726 1.0867024182202012 1.2630784383574793 1.2430052020163906 1.2849578930980623 1.311235064718625 1.4026176630573735 1.23789836747437 1.0297662889244439 1.0 12.924096599366647 -5.5228680665449135 1.7173478657896295 1.1786727646521487 0.7840726865560234 0.5179346234556154 0.1173532736966755 0.4764026059571184 1.9765323021224064 0.0209444769879053 0.2595304742002041 3.000073766997912e-06 5.5228680665449135 -0.3946000780961253 NFS(ph)GPR ddPTM_A549_PD325901_60min_R1 2 NFSGPR 6 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 NFS(1)GPR;NFS(1)GPR 90.37 0.037596 53131000.0 14097.2 14409.8 15810.5 14710.8 16709.0 16700.0 17028.2 17614.6 16850.8 16143.0 15358.4 True False 15528.337366189859 15624.1644171975 16883.49560625998 15619.452705349164 15535.417482920688 16564.000736867358 17676.217469188578 17263.262984613608 16142.619476235477 15123.728225018378 13469.414164919126 1.1528591500759673 1.1599735687013313 1.2534691857818714 1.1596237604772581 1.1533847940753381 1.2297491586536877 1.3123226632399503 1.2816639813166857 1.1984648536740872 1.1228200454632902 1.0 13.717399483523701 -10.387656180562264 0.844754431802879 1.005174184619325 1.2119794705739586 0.4232006937187329 0.06221219048237731 0.2800051722977478 0.3746205613602649 0.0335505947787988 0.011166356141332857 4.0958478883911444e-11 10.387656180562264 0.20680528595463366 NFS(ph)YVSPELQP ddPTM_A549_MK2206_60min_R1 1 NFSYVSPELQP 11 0 P24723-2;P24723 P24723-2 PRKCH Protein kinase C eta type 1 NFS(0.999)YVS(0.001)PELQP 68.44 0.0040934 820990.0 463.46 547.25 591.84 633.69 761.11 540.0 549.96 538.92 821.37 636.3 690.5 True False 541.680717490887 575.1026875062605 675.7718114313831 788.944078447425 649.1517272363202 597.1424415770108 649.8806132024542 615.3135603732815 635.3310064583651 492.55938807045715 519.0297931694864 1.0436408942598099 1.1080340571479752 1.3019904065713495 1.5200362076128442 1.250702244416908 1.1504974269984096 1.2521065683607862 1.1855072068519081 1.2240742531920534 0.9490002203199431 1.0 9.019673543818795 -10.643501414822802 0.5471266167063105 0.9629943068062791 1.2391054286359662 0.4017455251765021 0.11732063738291817 1.2000990761578367 0.5154092173123187 0.16889203667556044 0.028478708453447233 2.272472232112612e-11 10.643501414822802 0.2761111218296871 NFS(ph)YVSPELQP ddPTM_A549_PD325901_60min_R1 2 NFSYVSPELQP 11 0 P24723-2;P24723 P24723-2 PRKCH Protein kinase C eta type 1 NFS(0.982)YVS(0.018)PELQP;NFS(0.971)YVS(0.029)PELQP 107.18 0.00014349 2620000.0 880.84 1165.4299999999998 895.8599999999999 912.8 1052.0 1033.79 1137.5500000000002 833.99 1145.55 1102.3600000000001 1728.52 True False 970.2622283598639 1263.6448761769402 956.6584468438109 969.181582880789 978.1111492029781 1025.371156991982 1180.8400877412453 817.3554151975014 1097.406517257433 1032.7568014700655 1515.9229979910674 0.6400471723469302 0.8335811765185623 0.631073245878316 0.6393343093053991 0.6452248237537074 0.6764005548770122 0.7789578291945692 0.539180035054998 0.7239196969184707 0.6812725994913306 1.0 10.565980757671209 -10.298533657802396 0.6961262761886656 1.003669501740215 0.6762075129823069 0.0022775524165877803 0.11884764418398538 0.2935757591796788 0.26087216423344356 0.05105136372636597 0.015650000939232165 5.0288229098574035e-11 10.298533657802396 -0.3274619887579082 NFSAAKS(ph)LLK ddPTM_A549_PD325901_60min_R1 2 NFSAAKSLLK 10 1 Q13557-12;Q13557-8;Q13557;H0Y9J2;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11;Q13557-5;Q13557-3;Q13557-9;Q13557-4 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 NFS(0.044)AAKS(0.956)LLK;NFS(0.012)AAKS(0.988)LLK 48.70399999999999 0.008542200000000002 10044300.0 3509.4 3526.8 3445.3 3512.5 5583.1 5400.299999999999 4530.9 4830.9 4812.1 3540.7 4794.6 True False 3865.6717045162645 3824.015813305677 3679.118776271943 3729.4591475337097 5190.962316649378 5356.321747263762 4703.325878903611 4734.543909732265 4609.864171528518 3317.139597740357 4204.894595473572 0.9193266600969096 0.9094201356253024 0.8749609990776918 0.8869328500049317 1.2345047417448407 1.2738302056440756 1.1185359756619306 1.125960188117163 1.0963090909557835 0.7888758023354847 1.0 12.037853921410406 -6.7294659273922885 24.993054349733686 1.086738151001552 0.8968786254924858 0.3774170594886276 0.11945539325955234 136.72225562718933 106872.62376606581 0.013899615851909393 0.02893251217467718 1.8643784424720753e-07 6.7294659273922885 -0.18985952550906615 NFSNS(ph)PGPYVFCITEK ddPTM_A549_PD325901_60min_R1 1 NFSNSPGPYVFCITEK 16 0 Q8NAP3;D6RJE1;D6RE69;D6R9I1;A0A1B0GV48;D6RBC4 Q8NAP3 ZBTB38 Zinc finger and BTB domain-containing protein 38 1 NFS(0.018)NS(0.792)PGPY(0.189)VFCIT(0.001)EK 67.605 0.0011374 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NFTKPQDGDVIAPLIT(ph)PQK ddPTM_A549_MK2206_60min_R1 2 NFTKPQDGDVIAPLITPQK 19 1 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQK;NFTKPQDGDVIAPLIT(1)PQK 68.689 0.00055049 6167700.0 3176.0 3545.4 3470.3 4045.7 4852.799999999999 3776.0 4104.7 3943.2 5781.1 4979.7 4447.4 True False 3712.0311542550735 3725.84571637222 3962.4407225100176 5036.896681618373 4138.95954846529 4175.573813694056 4850.4708579026 4502.160675543536 4471.6900805196865 3854.782311448151 3342.9878380043106 1.1103932572100152 1.114525656963343 1.1852991738299314 1.506705057181808 1.2381018864059514 1.249054443520435 1.4509388286611964 1.3467475485137348 1.3376327696092325 1.153094925331637 1.0 11.706922391013519 -10.740328089802203 0.9903867701302137 0.9998466217658953 1.2870183028261768 0.2551284515718657 0.1267032154870203 0.42916108803912906 0.7471447302113118 0.08621503618172545 0.022102644066512692 1.818326676197734e-11 10.740328089802203 0.28717168106028146 NFTKPQDGDVIAPLIT(ph)PQK ddPTM_A549_PD325901_60min_R1 2 NFTKPQDGDVIAPLITPQK 19 1 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQK;NFTKPQDGDVIAPLIT(1)PQK 94.446 1.2069e-06 9898100.0 4382.8 5619.6 6191.7 5407.8 6527.1 6360.1 6318.5 7028.6 6231.1 5938.1 6365.2 True False 4827.738629553168 6093.183413987916 6611.905995716769 5741.827523995108 6068.659013272583 6308.305454284432 6558.9539751158645 6888.409059169965 5969.228536233944 5563.167352597512 5582.320752327277 0.8648264483083451 1.0915143869953476 1.1844367762207604 1.028573559052717 1.087121160270583 1.1300506965054795 1.1749511119334066 1.2339686959582497 1.0693094863360126 0.9965689180934686 1.0 12.446649306682914 -9.686364494944062 1.4157122019173156 1.0156004911258862 1.1023388221745285 0.1344652047128948 0.09248492308797962 0.5354813002771999 2.1703605100505174 0.02368848822279025 0.01720547936411098 2.0589011920517667e-10 9.686364494944062 0.08673833104864226 NFTKPQDGDVIAPLIT(ph)PQKK ddPTM_A549_MK2206_60min_R1 2 NFTKPQDGDVIAPLITPQKK 20 2 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK 93.397 9.3711e-07 42783000.0 2800.9 3909.3999999999996 4465.3 4301.5 6415.8 4000.8999999999996 3970.1 3677.3 6161.2 5526.8 5569.5 True False 3273.6234445695986 4108.3717616025115 5098.546684212888 5355.367693101672 5472.044318958866 4424.272582417523 4691.415780193219 4198.568536258937 4765.69803741466 4278.292041470694 4186.439439619776 0.7819588678600158 0.9813522495325157 1.2178718354220246 1.2792177625739312 1.3070878960226526 1.056810362654941 1.1206219146022822 1.0028972344671638 1.1383654549765787 1.0219405065272509 1.0 12.031508040136641 -10.948492767090482 0.8354497148170678 0.988459812745617 1.10973749890929 0.049084780072231715 0.14102572806386204 1.9787745106472352 2.039258515913741 0.16776864596789684 0.026683027664356207 1.1259192202361857e-11 10.948492767090482 0.12127768616367307 NFTKPQDGDVIAPLIT(ph)PQKK ddPTM_A549_PD325901_60min_R1 2 NFTKPQDGDVIAPLITPQKK 20 2 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK 101.04 6.373e-10 44868000.0 7924.6 6877.1 7705.200000000001 8334.099999999999 9904.7 8938.1 9086.8 8866.099999999999 8486.9 9260.8 10945.2 True False 8729.099558217811 7456.6573521845485 8228.121207131622 8848.87842888561 9209.02804136002 8865.311077017608 9432.603146487747 8689.258680179104 8130.225106989751 8676.07150754198 9599.009787339364 0.909375003422861 0.7768152671351084 0.85718437520338 0.9218532562136625 0.9593727108713117 0.9235651669727987 0.9826641867715251 0.9052244838462215 0.8469858128192691 0.9038506783257273 1.0 13.228669872935807 NFTPPS(ph)PFANK ddPTM_A549_MK2206_60min_R1 1 NFTPPSPFANK 11 0 Q9NPG3;Q9NPG3-2;K7EJT1 Q9NPG3 UBN1 Ubinuclein-1 1 NFT(0.042)PPS(0.958)PFANK 52.343999999999994 0.022890999999999998 1432300.0 1370.5 1397.9 1434.4 1506.1 2075.2 1612.9 1400.1 1332.3 2139.5 2176.7 1993.2 True False 1601.8068944919955 1469.0471390863431 1637.8194889111512 1875.0945676113975 1769.940829000818 1783.5760074436298 1654.4800468120504 1521.1576049976304 1654.9066660794433 1684.9819582161954 1498.2334304785234 1.069130391771055 0.9805195300021717 1.0931670963903437 1.251536996482923 1.181351846110865 1.190452683247076 1.104287231318569 1.0153008029675223 1.1045719795151545 1.1246458154908652 1.0 10.549046703356915 -10.417920736262124 0.5022037672111886 0.9865815473950076 1.1183685278854791 0.0 0.08129169769822651 1.588027351649141 0.6302783062652428 0.09852763677796773 0.02051603560271246 3.820139864240654e-11 10.417920736262124 0.13178698049047155 NFTPPS(ph)PFANK ddPTM_A549_PD325901_60min_R1 2 NFTPPSPFANK 11 0 Q9NPG3;Q9NPG3-2;K7EJT1 Q9NPG3 UBN1 Ubinuclein-1 1 NFT(0.023)PPS(0.977)PFANK;NFT(0.118)PPS(0.882)PFANK 61.48 0.0077664000000000006 7663700.0 5922.3 5902.2 7017.2 7193.5 7084.5 8096.200000000001 7991.1 8907.8 8335.5 7501.1 7634.4 True False 6523.52753623317 6399.5991077726985 7493.429389851529 7637.826157376154 6586.909160198196 8030.26723148656 8295.20568339771 8730.126940966082 7985.187922482067 7027.479265854267 6695.417198448963 0.9743272663792165 0.9558178255501699 1.1191878217219131 1.1407543295652294 0.9837936852873181 1.1993677157783125 1.238937834272575 1.3038958861276744 1.1926348554249746 1.0495954258805902 1.0 12.708958238849581 -5.764172217252637 23.592433647756216 1.1215331592764992 0.9650724790989 0.3205866573224875 0.09420357925508487 35.74243959081937 308596.1890996616 0.015459962022965703 0.051519628064214354 1.7211859121830053e-06 5.764172217252637 -0.15646068017759918 NFTTS(ph)PK ddPTM_A549_PD325901_60min_R1 2 NFTTSPK 7 0 Q13107 Q13107 USP4 Ubiquitin carboxyl-terminal hydrolase 4 1 NFT(0.01)T(0.09)S(0.901)PK;NFT(0.015)T(0.128)S(0.857)PK 109.88 0.0085529 43800000.0 13245.1 12491.099999999999 16008.2 14566.3 17363.7 16484.3 15112.400000000001 16806.1 17634.9 17077.5 16754.0 True False 14589.732801472723 13543.768834519266 17094.61271712666 15466.027268532474 16144.133613513079 16350.057326152253 15687.510651822586 16470.889151369593 16893.76648001669 15999.22373553561 14693.364212356446 0.9929470603609911 0.9217609145718703 1.1634240103264353 1.052585850660821 1.0987363669878 1.1127511092662226 1.0676595519649685 1.120974673554905 1.1497548305383873 1.088874100192861 1.0 13.842877134654335 -5.74857837490209 24.9740387725891 1.0832781553512814 0.9573539526057047 0.5529824475815406 0.046765793931799096 171.37422151541105 332775.430241339 0.00821592494586351 0.031411560000820994 1.7841099902890756e-06 5.74857837490209 -0.1259242027455767 NFVFHT(ph)LSPVK ddPTM_A549_PD325901_60min_R1 2 NFVFHTLSPVK 11 0 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 NFVFHT(0.5)LS(0.5)PVK;NFVFHT(0.526)LS(0.474)PVK 110.38 7.5356e-05 61223000.0 1892.71 1587.06 2072.64 1859.77 2612.1000000000004 2485.6 2358.4 2199.91 2298.7 2266.39 2230.1000000000004 True False 2084.8565258605395 1720.807115987555 2213.301814196813 1974.6437690558776 2428.6351072557995 2465.3580976980543 2448.150202565998 2156.0310692539906 2202.0936329445794 2123.289748615462 1955.8118377686576 1.065980114037507 0.8798428779073072 1.1316537570004281 1.009628702988476 1.2417529438959607 1.2605292851232186 1.251730946346576 1.1023714181594066 1.1259230517067016 1.0856308912813804 1.0 10.93355186467831 -5.780148839019315 24.98520307642302 1.102093829653537 0.9729114428028655 0.24067520327979675 0.09770408641059553 277.5591557726945 370662.30560319533 0.015486739087068489 0.04826931920603074 1.659018240379329e-06 5.780148839019315 -0.12918238685067152 NFVFHT(ph)LSPVKAEAAK ddPTM_A549_PD325901_60min_R1 1 NFVFHTLSPVKAEAAK 16 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 NFVFHT(0.898)LS(0.102)PVKAEAAK 113.47 1.2257e-07 30685000.0 1643.8 1361.9 1858.8 1670.1 1482.4 2217.9 1934.0 2083.4 2092.0 1520.7 1845.6 True False 1810.6773658983977 1476.6720925884658 1984.949345872432 1773.2582839277027 1378.2813380023726 2199.8381577424025 2007.599428325408 2041.8449526043173 2004.0805151259672 1424.6827424757148 1618.6029002223386 1.1186668241170672 0.912312768243294 1.2263349741927254 1.0955486881211691 0.8515253110031161 1.3590968837632893 1.2403285747539654 1.2614860336181533 1.2381545312013698 0.8801928763874166 1.0 10.660533370271896 -7.2581693367508056 24.957433306499137 1.1535693859459808 1.047075688703287 0.13224209979194845 0.1545955031956634 531.4881106651569 4056388.134287926 0.022261205158643774 0.03754241094229849 5.5186221946986934e-08 7.2581693367508056 -0.10649369724269375 NFVFHTLS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 NFVFHTLSPVK 11 0 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 NFVFHT(0.218)LS(0.782)PVK;NFVFHT(0.265)LS(0.735)PVK 108.59 3.6096e-05 27533000.0 1381.77 2109.3 2707.7 2230.1 3756.3 2702.3 2481.1000000000004 3140.4 3447.8 2436.4 2542.6 True False 1614.9789949669498 2216.6543604512667 3091.692575379758 2776.474600112993 3203.7532459405206 2988.2555923584373 2931.8837541214066 3585.561317071646 2666.8788050052376 1886.0155478467107 1911.2022478099004 0.8450068520051183 1.1598219722645222 1.6176689719377497 1.4527371989514097 1.6763025732163042 1.5635475501259808 1.534052064600245 1.8760763394771223 1.3953932965813993 0.9868215412617624 1.0 10.900264740357526 -10.149481115002548 0.972341357351241 1.037494187349588 1.4705653939623962 0.31300254468865296 0.26049654595230115 0.4681680714073299 0.8818475581655502 0.11057989140900527 0.05130963068006577 7.087921271202133e-11 10.149481115002548 0.4330712066128082 NFVFHTLS(ph)PVKAEAAK ddPTM_A549_MK2206_60min_R1 2 NFVFHTLSPVKAEAAK 16 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 NFVFHT(0.366)LS(0.634)PVKAEAAK;NFVFHT(0.04)LS(0.96)PVKAEAAK 169.28 2.7196e-28 39970000.0 3717.3 6018.8 6323.0 6334.4 8687.7 6834.200000000001 6588.3 6275.299999999999 9685.5 7782.099999999999 8239.3 True False 4344.689360740679 6325.131211626641 7219.696478238434 7886.328284362019 7409.750838526603 7557.390507825198 7785.308829663481 7164.842992300251 7491.749714565299 6024.118205096817 6193.254416888274 0.7015195999203947 1.0212936181628118 1.1657354909482118 1.273373860253009 1.196422807744033 1.220261594165595 1.2570626532689926 1.1568785181442844 1.2096628380284493 0.9726902529096427 1.0 12.596481997380511 -5.308803883787527 2.5370634815998803 1.1444761648756543 0.6320478487981884 0.6757309160796805 0.09226063975638359 0.23020281929958752 1.9964354501655672 0.014676880909366792 0.24026540955340076 4.911296075774406e-06 5.308803883787527 -0.5124283160774659 NFVFHTLS(ph)PVKAEAAK ddPTM_A549_PD325901_60min_R1 1 NFVFHTLSPVKAEAAK 16 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 NFVFHT(0.373)LS(0.627)PVKAEAAK 158.65 1.0685e-20 33695000.0 4433.7 4155.8 4636.9 4517.6 5821.6 7414.5 5833.9 6076.6 5593.6 5215.5 5583.9 True False 4883.805960082567 4506.023850781366 4951.587917944846 4796.64189178599 5412.710899429715 7354.118770269642 6055.9122569325755 5955.3974459995225 5358.520444267974 4886.192439917201 4897.115699258514 0.9972821268695037 0.9201383278454367 1.011123326878836 0.979483064390793 1.1052854847291578 1.501724529682472 1.2366283806301572 1.216103072039169 1.0942196944783893 0.9977694504250805 1.0 12.25771656622534 -6.763477618228724 7.029096384520425 1.112223402965128 0.9749693533033856 0.25210204785402857 0.13778368549778836 0.2130260952149078 56.06619299084736 0.022942992061113183 0.04561793793934168 1.7239409336419182e-07 6.763477618228724 -0.13725404966174226 NFYES(ph)DDDQKEK ddPTM_A549_MK2206_60min_R1 4 NFYESDDDQKEK 12 1 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK 180.48 3.8216e-17 351780800.0 42931.5 52016.6 51842.1 49717.4 72266.3 65091.9 62307.3 70609.40000000001 75961.90000000001 65922.5 62767.799999999996 True False 50177.28762559879 54664.022759137806 59194.0893238154 61898.16523189892 61636.023000588706 71979.88165349385 73627.7298912452 80618.4986822185 58756.65093622815 51030.56146483529 47180.82295684826 1.0635102247260737 1.1586068095745958 1.2546218063630328 1.3119348360775986 1.3063787178312092 1.5256173407430154 1.5605435699709047 1.708713278612212 1.2453502769539901 1.0815954081917567 1.0 15.525912962717948 -9.737861342452478 1.2609824921749904 1.0494375074165192 1.3558508677316379 0.30353631567723705 0.1786451239694621 0.3557804072623082 1.1484391307184867 0.05447152181616402 0.03738585085607822 1.8286839683473656e-10 9.737861342452478 0.3064133603151187 NFYES(ph)DDDQKEK ddPTM_A549_PD325901_60min_R1 4 NFYESDDDQKEK 12 1 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK 182.02 3.3351e-19 546350600.0 56167.9 54730.8 61785.7 59639.700000000004 74506.1 59729.799999999996 67120.9 62420.4 67733.1 65280.799999999996 67006.2 True False 61870.02385937743 59343.156593759326 65978.84914959654 63323.50881741387 69273.04856809128 59243.380312152076 69675.22257946577 61175.37615414352 64886.51335520006 61158.959147108944 58764.862187298386 1.0528404484670126 1.0098408195805475 1.1227602123749625 1.0775743609435504 1.1788175108332708 1.008142929414665 1.1856612946252358 1.0410196480876994 1.1041719650152575 1.0407402803426982 1.0 15.84266614854269 -10.795278934546772 0.88043430485654 0.9960803966787122 1.0883395167446832 0.15173016498838188 0.05779935896885395 0.7123357888990078 0.9099484759500062 0.04480426492419171 0.009462216878906278 1.6022160040320786e-11 10.795278934546772 0.09225912006597103 NFYES(ph)DDDQKEKTDKK ddPTM_A549_MK2206_60min_R1 2 NFYESDDDQKEKTDKK 16 3 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 NFY(0.001)ES(0.999)DDDQKEKTDKK;NFY(0.001)ES(0.999)DDDQKEKTDKK 65.097 0.00050654 24630000.0 3021.5 4961.4 5464.1 4682.6 7239.9 4678.6 4222.2 4130.2 7715.2 7085.900000000001 6260.0 True False 3531.455331417414 5213.91406814721 6238.99154305593 5829.837210209902 6174.920300637537 5173.68634659667 4989.31908695796 4715.6684982070165 5967.719518642728 5485.190268628723 4705.469232789262 0.7505001428569692 1.1080540133627772 1.3259021012358512 1.2389491720795183 1.3122857668707417 1.0995048720209915 1.0603233896825293 1.002167534184834 1.2682517350358367 1.165705267055219 1.0 12.200122881380725 -11.142587735219713 1.5200589563971052 1.0001115417599482 1.1552079545604466 0.0 0.16521383629787412 0.7537064119857506 3.1243688719903813 0.11648953289452399 0.025007107524744932 7.201322570018418e-12 11.142587735219713 0.15509641280049835 NFYES(ph)DDDQKEKTDKK ddPTM_A549_PD325901_60min_R1 2 NFYESDDDQKEKTDKK 16 3 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 NFY(0.005)ES(0.995)DDDQKEKTDKK;NFY(0.006)ES(0.994)DDDQKEKTDKK 69.737 0.00047183 30940200.0 3356.4 3029.06 3576.8999999999996 4087.9 4611.299999999999 5133.200000000001 4497.0 5323.7 4833.4 4517.7 4976.6 True False 3697.139257148915 3284.3295166869943 3819.649943647029 4340.400298705498 4287.418196121383 5091.396921107038 4668.1357958528215 5217.514627138143 4630.269006601263 4232.451651004496 4364.509749266629 0.8470915336528111 0.7525082323939961 0.8751612811241507 0.9944760232085215 0.9823367210582585 1.1665449760909683 1.069567045104484 1.1954411667919507 1.0608909757571945 0.969742741831583 1.0 12.091603894525127 -6.2764911194780115 1.7172019908655605 1.0536535759796515 0.796013310844844 0.69921935750334 0.06923037572598202 0.1651968347154365 0.9200950021143701 0.010344155518365905 0.036451098213951545 5.290648154996752e-07 6.2764911194780115 -0.25764026513480753 NFYQEHPDLAR ddPTM_A549_PD325901_60min_R1 1 NFYQEHPDLAR 11 0 P17844-2;P17844;J3KTA4;J3QRQ7;J3QR02;J3KRX8;J3KTQ4;X6RLV5 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 107.09 0.00015596 11757000.0 1483.2 1661.8 1729.6 2001.0 2132.9 1972.5 1864.1 1781.4 2640.3 2576.0 4539.0 False True 1633.77337212587 1801.8457180876067 1846.9810569297165 2124.597225399276 1983.0924621055442 1956.4366139802917 1935.0393455746598 1745.868579518734 2529.3373728905794 2413.350920377091 3980.7317750916736 0.4104203609870814 0.4526418306709729 0.46398028334556196 0.5337202668849367 0.49817284211767193 0.4914766240273087 0.4861014142381138 0.43857980847718075 0.635395077035134 0.6062581094958384 1.0 11.958817949414168 -9.960944925139312 0.5148896827238194 1.026057023393026 0.45743380757014285 0.4096651070096937 0.12083974998398024 0.15344100935763444 0.07956906899257032 0.03896525102529788 0.013334595197153097 1.0940951046567601e-10 9.960944925139312 -0.5686232158228831 NGAYGT(ph)PQKYDPTFK ddPTM_A549_PD325901_60min_R1 2 NGAYGTPQKYDPTFK 15 1 K7ESF5;Q8IWA5-3 K7ESF5 SLC44A2 Choline transporter-like protein 2 1 NGAY(0.047)GT(0.632)PQKY(0.114)DPT(0.207)FK;NGAY(0.013)GT(0.512)PQKY(0.385)DPT(0.089)FK 67.13600000000001 0.001228 8017300.0 6193.5 5466.1 5990.0 5481.0 7733.5 7850.200000000001 6782.1 7469.1 7348.299999999999 7072.3 7762.2 True False 6822.259560586279 5926.747430279621 6396.517420796135 5819.548921745843 7190.325639126652 7786.2705739255125 7040.1965268075255 7320.1229411044005 7039.476505401596 6625.75377103373 6807.498608639918 1.0021683371227763 0.8706204394603227 0.9396281642537283 0.8548733178380393 1.056236079137917 1.1437785039049968 1.0341825876941455 1.0753028919923497 1.0340768188284692 0.9733022585747544 1.0 12.732909067063954 -6.773080563266867 24.999993876864643 1.0345220619238635 0.9151513808392818 0.5566214903186479 0.05460521749775474 128.34744182808612 275632.4472947821 0.007740722251205522 0.014716022425659451 1.6862401924486053e-07 6.773080563266867 -0.11937068108458171 NGDECAYHHPIS(ph)PCK ddPTM_A549_MK2206_60min_R1 1 NGDECAYHHPISPCK 15 0 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;G3V411;Q6PJT7-8;H0YJ51;Q6PJT7-6 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 NGDECAYHHPIS(1)PCK 78.08800000000001 0.00063149 21307000.0 1989.0 2138.3 2083.3 1732.0 2463.2 2346.9 2144.8 2198.1 2836.5 3481.3 3446.7 True False 2324.694573618811 2247.130336582251 2378.743266347324 2156.340077752434 2100.8665429813104 2595.2474002538615 2534.482397259116 2509.6874063989253 2194.0372789597295 2694.8719121321456 2590.7892659192885 0.8972920353651151 0.8673535768201135 0.9181538991374799 0.8323101018358205 0.8108982735945762 1.0017207630096425 0.978266519241505 0.9686960801531707 0.8468605717266705 1.0401741073973167 1.0 11.339175956537675 -7.257589036966548 24.985522612072547 0.9382604783599642 0.8664356267430465 0.3972903205316308 0.05798339146054952 401.5734848984115 2605875.333703701 0.009727824764654946 0.016449446564409508 5.5260010491385786e-08 7.257589036966548 -0.07182485161691765 NGDVSQFPY(ph)VEFTGR ddPTM_A549_MK2206_60min_R1 1 NGDVSQFPYVEFTGR 15 0 F2Z3N7;C9JZ87;Q9NUM4 F2Z3N7 TMEM106B Transmembrane protein 106B 1 NGDVSQFPY(0.767)VEFT(0.233)GR 60.628 0.0058421 2500500.0 617.52 863.65 858.95 567.94 1029.1 808.24 853.08 1215.0 1139.2 1424.2 1148.4 True False 721.7422790855143 907.6060960525938 980.7620259343522 707.0853254957957 877.7207532405271 893.767420333709 1008.0735935536208 1387.2299707814464 881.1730189285821 1102.4722308501425 863.2205857723948 0.8361041094029422 1.0514185030011578 1.1361661689946647 0.8191247256494794 1.0167977544872355 1.0353870552495934 1.1678053213381305 1.6070399543822014 1.0207970401217017 1.2771616537199115 1.0 9.753585459880565 -7.003892761551298 24.581428678125317 1.0726414827299398 0.9719967465094937 0.10644242803922566 0.19561441313767003 360.1164163967294 2274049.997134267 0.02890931710090593 0.053759737232971984 9.910766369272739e-08 7.003892761551298 -0.10064473622044601 NGES(ph)SELDLQGIR ddPTM_A549_MK2206_60min_R1 1 NGESSELDLQGIR 13 0 H0YI18;F8W1K5;F8VXJ7;F8W031;Q9Y2B0 H0YI18 CNPY2 Protein canopy homolog 2 1 NGES(0.84)S(0.16)ELDLQGIR 47.915 0.033573 1443800.0 887.47 1116.2 1088.0 1107.4 1494.4 1245.2 1166.8 1107.5 1689.0 1421.8 1358.0 True False 1037.2532394416721 1173.009812324327 1242.2947601333888 1378.713049713075 1274.5757396197096 1376.9662375031357 1378.7924566961658 1264.4915165765037 1306.4441967787707 1100.614392517014 1020.771121106681 1.0161467325967468 1.1491408681826683 1.217015973949714 1.3506583613164203 1.2486400851915396 1.3489470940461967 1.3507361524896313 1.2387610605652621 1.2798600683004961 1.0782185837347849 1.0 9.995443703805478 -10.690553708122595 0.8885796760636134 0.9956757792943418 1.2509283219641227 0.39339367969561156 0.09648264179886967 0.43709101768659336 0.5973542762324755 0.073497084047292 0.01805765721764574 2.0391364690599606e-11 10.690553708122595 0.2552525426697809 NGESAS(ph)PERDR ddPTM_A549_MK2206_60min_R1 2 NGESASPERDR 11 1 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 NGES(0.053)AS(0.947)PERDR;NGES(0.134)AS(0.866)PERDR 49.298 0.007989 10161700.0 765.38 907.49 856.89 575.79 798.7 585.64 498.0 523.8199999999999 800.6800000000001 1302.63 952.8900000000001 True False 894.557432255589 953.6773647968141 978.4098869583643 716.858575848195 681.212288031492 647.6120360836302 588.4801537835882 598.0730891314709 619.3272584232242 1008.3649782841742 716.2611145738914 1.2489264236936375 1.3314660608989828 1.3659960970245144 1.00083413892245 0.9510669700905791 0.9041563515128125 0.8216000307844145 0.8349931009269833 0.8646668733254718 1.4078175650845675 1.0 9.48434181082224 -6.36860605665608 3.7090304809175074 0.9179556873761395 1.3177020974711207 0.4613710448596581 0.15839993415706685 0.06351528399840643 1.5808086793809084 0.010437233360582962 0.025853079269666734 4.279508992997442e-07 6.36860605665608 0.39974641009498113 NGESAS(ph)PERDR ddPTM_A549_PD325901_60min_R1 1 NGESASPERDR 11 1 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 NGES(0.002)AS(0.998)PERDR 73.38600000000001 0.00041885 7195300.0 758.27 633.0 657.3 636.07 1142.2 836.9 812.06 526.97 852.9 760.33 804.62 True False 835.2490121911292 686.3451315136933 701.9083306659935 675.3585992802186 1061.9758123760857 830.0845638733103 842.9633876762822 516.4591699500324 817.0555790396448 712.3226340412702 705.6568409064248 1.1836475802009396 0.9726330019447904 0.9946879134118274 0.957063773962302 1.504946527567089 1.1763289402920782 1.1945797713708628 0.7318843097824069 1.1578653131033592 1.0094462247773055 1.0 9.462822964943118 -4.821088389134544 11.291867228037413 1.0780830747756818 12.248345798362054 0.02871209124188112 0.18468230306061537 243063.0080232415 97627.69094604392 0.024494537271235246 69481047.86541496 1.5097728486334915e-05 4.821088389134544 11.170262723586372 NGEVVHTPET(ph)S(ph)V ddPTM_A549_PD325901_60min_R1 1 NGEVVHTPETSV 12 0 O15427 O15427 SLC16A3 Monocarboxylate transporter 4 2 NGEVVHT(0.239)PET(0.887)S(0.874)V 47.938 0.052451 2717200.0 667.41 536.77 387.9 415.27 270.55 285.09 244.7 682.34 433.78 645.44 694.99 True False 735.1649718787257 582.0054916944786 414.22522663219047 440.92028475340186 251.54750134683047 282.76832156128813 254.01219240497787 668.7301934146252 415.5497351105839 604.6868082485206 609.5106359045961 1.2061561006029724 0.9548733974604131 0.6796029506809578 0.7234004770056499 0.4127040391567573 0.46392680439714024 0.4167477603208506 1.097159186438378 0.6817760193697883 0.9920857367010235 1.0 9.251507585735776 -10.81146948052808 0.728716069935394 1.0290869413582884 0.7192017521917539 0.13514302217832053 0.2501115365879117 1.523908956470538 1.2022778486133272 0.2940206716372437 0.050350218375530664 1.5435848929057063e-11 10.81146948052808 -0.3098851891665345 NGEVVHTPET(ph)SV ddPTM_A549_MK2206_60min_R1 2 NGEVVHTPETSV 12 0 O15427 O15427 SLC16A3 Monocarboxylate transporter 4 1 NGEVVHT(0.052)PET(0.513)S(0.435)V;NGEVVHT(0.001)PET(0.545)S(0.455)V 62.924 0.0077456999999999995 79339000.0 696.72 601.0999999999999 828.6500000000001 711.4100000000001 988.0799999999999 1116.04 644.1 550.26 1326.71 1123.6 932.75 True False 814.3093028314221 631.6934224943137 946.1650303166667 885.705481936409 842.7347409016614 1234.1386120326047 761.1246326345565 628.2610401005744 1026.2123033205226 869.7779796259091 701.1224324096145 1.1614366695311795 0.9009744850458037 1.3495004389816638 1.2632679272469152 1.2019794289070946 1.7602326711914245 1.0855802031875186 0.8960789315232286 1.4636706171183835 1.2405507788941512 1.0 9.453522584377525 -5.764448354322443 24.99941741729002 1.2370521495519968 1.0312055846000798 0.11974261181224377 0.2274300292304373 133.56251980653803 1109724.803383925 0.034153448806767295 0.11324500588283833 1.720091879938193e-06 5.764448354322443 -0.205846564951917 NGEVVHTPET(ph)SV ddPTM_A549_PD325901_60min_R1 2 NGEVVHTPETSV 12 0 O15427 O15427 SLC16A3 Monocarboxylate transporter 4 1 NGEVVHTPET(0.895)S(0.105)V;NGEVVHTPET(0.84)S(0.159)V 85.845 0.00038334 109564000.0 1661.2800000000002 1323.09 1396.1 1862.07 1650.1999999999998 2123.63 1372.51 1732.96 2160.81 1690.8200000000002 2283.71 True False 1829.9319226303037 1434.591437684758 1490.8477414312995 1977.085834832199 1534.2956448809457 2106.3358613672813 1424.74161911629 1698.3947533191788 2069.9986701191874 1584.0613366428533 2002.828147630447 0.913673958894228 0.7162828420311689 0.7443712747871687 0.9871470186652291 0.7660645506186721 1.051680776435709 0.71136488709823 0.8479982445466205 1.033537836268284 0.7909122600044153 1.0 10.967822920891171 -8.7556907011267 22.413358572431065 1.0158373229192463 0.8397553167555313 0.027609860590220858 0.12416339705750057 27.579861811880928 107529.25041128618 0.016513315839371486 0.018449117024071496 1.755130037589505e-09 8.7556907011267 -0.17608200616371505 NGFVVLK ddPTM_A549_MK2206_60min_R1 2 NGFVVLK 7 0 I3L397;I3L504;P63241;P63241-2;Q6IS14;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 0 ; 110.35 0.023322 10610000.0 5115.6 7395.8 6916.0 5654.4 8944.4 6137.4 5996.4 6246.3 9446.8 8318.8 8596.3 False True 5978.9882155879295 7772.214629984106 7896.7927951126085 7039.728253835661 7628.690608575037 6786.855594323597 7085.868261341179 7131.732153491478 7307.11488343972 6439.577302342486 6461.601464189513 0.9253105826355513 1.202831012258814 1.222110778400214 1.0894711307792895 1.180619177900956 1.0503364579101107 1.0966117766023455 1.1037096907037458 1.1308519914043107 0.9965915319957313 1.0 12.657676056099737 -10.875408095677459 0.6601592769697598 0.9807813506003885 1.118626135586469 0.2375651848604381 0.07712178508693403 1.2461937998270114 0.739923623169164 0.10249092571641859 0.014666970090566564 1.3322689439384204e-11 10.875408095677459 0.13784478498608055 NGFVVLK ddPTM_A549_PD325901_60min_R1 2 NGFVVLK 7 0 I3L397;I3L504;P63241;P63241-2;Q6IS14;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 0 ; 110.35 0.023322 19442200.0 10124.2 10652.5 11775.5 13724.6 14449.8 15546.099999999999 15207.3 16069.3 15493.5 13450.8 14554.3 False True 11152.001330957877 11550.223559952003 12574.656241833873 14572.33737117186 13434.895897103796 15419.497715893032 15786.022123253859 15748.785205378012 14842.362075097597 12601.51419247211 12764.213367309263 0.8736928011184409 0.904891138026066 0.9851493296123622 1.1416557332466273 1.0525439767022569 1.2080256943513874 1.2367406959588927 1.2338234054996768 1.162810558550418 0.9872534898818093 1.0 13.639817009652404 -5.996776522661043 2.3480696561982546 1.112425963017857 0.8830790362981323 0.5608978564864997 0.08297273111726668 0.20718617327465488 2.2313992669922156 0.013736450601879117 0.05315526611605346 1.007449944643292e-06 5.996776522661043 -0.22934692671972468 NGGS(ph)PALNNNPR ddPTM_A549_MK2206_60min_R1 2 NGGSPALNNNPR 12 0 O14495 O14495 PPAP2B Lipid phosphate phosphohydrolase 3 1 NGGS(1)PALNNNPR;NGGS(1)PALNNNPR 64.499 0.006418500000000001 50649000.0 1808.69 2636.3 2677.5 2558.8999999999996 4117.3 2792.6 2465.1 2374.9 3500.9 3357.1000000000004 4266.4 True False 2113.9526537750667 2770.476409452271 3057.2097612657626 3185.8306148733873 3511.6506241543307 3088.1110784221482 2912.976761228761 2711.54934782622 2707.951739788513 2598.7287783927904 3206.9351333501772 0.6591816066970745 0.8639016051933821 0.9533120048087778 0.993419100293824 1.095017665819086 0.9629477834795188 0.9083366641674702 0.8455267210202521 0.8444048997522463 0.8103465365942671 1.0 11.646979457356377 -3.513535045281457 0.011079964755402735 1.7260489427758157 1.2781979960006858e-07 0.0 0.11186673337507325 16749.892190302784 18.056254790214492 1233.9842281498811 1600.5204343917069 0.0003065243320424697 3.513535045281457 -1.726048814956016 NGGS(ph)PALNNNPR ddPTM_A549_PD325901_60min_R1 2 NGGSPALNNNPR 12 0 O14495 O14495 PPAP2B Lipid phosphate phosphohydrolase 3 1 NGGS(1)PALNNNPR;NGGS(1)PALNNNPR 117.75 2.1154e-05 62930000.0 10608.400000000001 10314.5 11923.6 11730.099999999999 13732.9 16352.2 13992.0 14980.7 13320.2 13369.900000000001 13618.6 True False 11685.356958508683 11183.7391137409 12732.807198431532 12454.641636010017 12768.348479933069 16219.033104754635 14524.473216716191 14681.898186368191 12760.398316243252 12525.722232278591 11943.598535418252 0.9783782436973443 0.9363793567387567 1.0660779630756103 1.0427880340314761 1.0690537229687564 1.3579687107413865 1.2160885325845858 1.2292692309465714 1.068388080728167 1.0487393891492647 1.0 13.543949957109144 -5.839705170555133 4.686619193745951 1.085562381684595 0.9573266129734485 0.20809313005972463 0.10618563296114795 0.3007300540761044 11.924374212985944 0.017248648272006416 0.05843603574311935 1.446421369427666e-06 5.839705170555133 -0.1282357687111465 NGHDGDTHQEDDGEKS(ph)D ddPTM_A549_MK2206_60min_R1 4 NGHDGDTHQEDDGEKSD 17 1 K7EQH5;Q08117;Q08117-2 K7EQH5 AES Amino-terminal enhancer of split 1 NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D 204.18 4.1567e-49 132718000.0 6136.66 8696.630000000001 9525.1 1017.7 12268.0 9733.5 9123.63 10055.3 14728.999999999998 12945.0 11121.6 True False 7172.378181067677 9139.251320689942 10875.902407855277 1267.0365456862894 10463.39345132133 10763.492509425609 10781.2754728204 11480.669568064743 11392.905017379817 10020.715509307041 8359.799779455123 0.8579605218170859 1.093238063326634 1.3009764222563893 0.15156302532509608 1.2516320638487008 1.2875299401162397 1.2896571397937362 1.3733187242449763 1.3628203208142369 1.1986788886898645 1.0 13.02925267425936 NGHDGDTHQEDDGEKS(ph)D ddPTM_A549_PD325901_60min_R1 4 NGHDGDTHQEDDGEKSD 17 1 K7EQH5;Q08117;Q08117-2 K7EQH5 AES Amino-terminal enhancer of split 1 NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D 241.71 1.1582999999999998e-74 194160000.0 8495.619999999999 8892.009999999998 9354.789999999999 8123.72 12768.5 10182.14 8171.33 1744.91 11098.99 11160.52 11545.82 True False 9358.089088255108 9641.370889211801 9989.66230432212 8625.503734093254 11871.684608933678 10099.220027717754 8482.294434673346 1710.1064011945853 10632.538048077418 10455.842862533746 10125.757334983246 0.9241865846344216 0.9521629415216234 0.986559520818168 0.8518378871566673 1.1724243645379955 0.9973792274110888 0.8376948166995927 0.16888676516929535 1.0500486725415894 1.032598601431035 1.0 13.30574219496045 NGHRDS(ph)ITTVR ddPTM_A549_MK2206_60min_R1 4 NGHRDSITTVR 11 1 Q8TF74-2;Q8TF74;J3KSA3;A8MWR2 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 NGHRDS(0.996)IT(0.004)TVR;NGHRDS(0.98)IT(0.017)T(0.003)VR;NGHRDS(0.999)IT(0.001)TVR;NGHRDS(0.991)IT(0.008)T(0.001)VR 121.24 2.9635e-06 79241800.0 3998.91 4026.1400000000003 3913.83 2784.66 4258.2 3812.3900000000003 3226.55 3640.36 4976.19 5611.200000000001 6041.599999999999 True False 4673.828244037202 4231.053328965658 4468.869945820646 3466.901825008139 3631.824420803432 4215.814579340334 3812.772369860314 4156.392178134935 3849.0909103425415 4343.626022852351 4541.303980322623 1.0291819847974952 0.9316824743066584 0.9840499480290612 0.7634154947632119 0.7997316269820415 0.9283268853191444 0.8395765591515078 0.9152420089349882 0.8475739406612227 0.9564711020608163 1.0 12.148890894035224 -10.910929260296356 1.127437470954066 1.0008884828297153 0.8870699519156172 0.14889751145890462 0.07529025552469915 0.6114161934378924 1.362570907733187 0.0550646652511423 0.012655052523005444 1.227639177883418e-11 10.910929260296356 -0.1138185309140981 NGHRDS(ph)ITTVR ddPTM_A549_PD325901_60min_R1 3 NGHRDSITTVR 11 1 Q8TF74-2;Q8TF74;J3KSA3;A8MWR2 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 NGHRDS(1)ITTVR;NGHRDS(1)ITTVR;NGHRDS(0.984)IT(0.012)T(0.003)VR 145.49 5.997000000000001e-12 97397000.0 9346.779999999999 9707.380000000001 8864.94 7677.13 9989.980000000001 8935.01 7459.829999999999 5863.24 9505.33 10402.810000000001 12339.07 True False 10295.658224864239 10525.454980653074 9466.568137614777 8151.328884072734 9288.318268360048 8862.246240953127 7743.717912825604 5746.293078577197 9105.854035775477 9745.974801245336 10821.442613809302 0.9514127267769172 0.9726480429902649 0.8747972405762645 0.7532571372388722 0.8583253268383251 0.8189523852987924 0.7155901656719782 0.5310098924559579 0.8414639674894591 0.9006169647666425 1.0 13.401605218183299 -10.134170210126145 1.1291350338912531 0.9803977632332361 0.8127222733529583 0.1560457115148327 0.11742123133318194 0.4766700301488073 1.215321212736527 0.044575605686728706 0.02296717412350415 7.342260514633623e-11 10.134170210126145 -0.1676754898802778 NGIDILVGT(ph)PGR ddPTM_A549_MK2206_60min_R1 2 NGIDILVGTPGR 12 0 Q9NR30;Q9NR30-2;Q9BQ39;A0A087WVC1 Q9NR30;Q9BQ39 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 1 NGIDILVGT(1)PGR;NGIDILVGT(1)PGR 87.18 0.00029791 9698300.0 1362.8899999999999 1588.05 1621.31 1711.66 2231.79 1505.6100000000001 1696.26 1786.88 2333.5 2018.8000000000002 2108.93 True False 1592.9125125386336 1668.874961890026 1851.236137455757 2131.0167768393367 1903.4966474343369 1664.9326508569686 2004.4484852549188 2040.1757120904936 1804.9659758337846 1562.7516778825077 1585.2244774930136 1.0048498084370854 1.05276885739823 1.1678069344370918 1.3442996919966046 1.2007741959956746 1.0502819471284037 1.2644571880601387 1.286994833259812 1.138618537286458 0.9858235852842456 1.0 10.63047143394483 -10.087299757933266 0.9332884844943092 1.0133341674392726 1.1716626680020061 0.30026297469178065 0.10102087856650341 0.5155944821760126 0.9000737718787185 0.04316920238825581 0.02046206741363097 8.179000637979048e-11 10.087299757933266 0.1583285005627335 NGIDILVGT(ph)PGR ddPTM_A549_PD325901_60min_R1 2 NGIDILVGTPGR 12 0 Q9NR30;Q9NR30-2;Q9BQ39;A0A087WVC1 Q9NR30;Q9BQ39 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 1 NGIDILVGT(1)PGR;NGIDILVGT(1)PGR 136.6 3.0036e-08 16379800.0 5632.799999999999 5564.5 6890.4 7348.4 8319.8 7409.7 7525.4 7790.8 7646.5 6684.8 6979.9 True False 6204.637709351803 6033.439943614447 7358.023979341187 7802.293978572736 7735.44594975184 7349.357859878205 7811.783215056893 7635.406382235636 7325.144196420027 6262.720587164896 6121.416549231631 1.0135950820289494 0.9856280642054612 1.2020132791428444 1.2745896175864868 1.263669264710111 1.200597574233158 1.2761397876178577 1.2473267128331667 1.1966420088401744 1.0230835521152375 1.0 12.579649828441836 -10.563322966800396 0.9118380915035448 1.0026505091325388 1.1880861272488812 0.3313000194616207 0.09401577851983213 0.5470909921887207 0.8300702495032013 0.06423938717550395 0.018921778921334023 2.7332353765115415e-11 10.563322966800396 0.18543561811634235 NGIDILVGTPGR ddPTM_A549_MK2206_60min_R1 1 NGIDILVGTPGR 12 0 Q9NR30;Q9NR30-2;Q9BQ39;A0A087WVC1 Q9NR30;Q9BQ39 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 0 72.652 0.0050115 1208800.0 992.9 1448.2 1051.1 1098.5 1801.9 1138.6 1518.7 1507.3 1676.7 1924.7 2120.9 False True 1160.4772459256496 1521.9071942376738 1200.161785272248 1367.6325493135384 1536.8428969624958 1259.0858962584884 1794.6281316287862 1720.9643909126523 1296.9301271397062 1489.9089332377953 1594.2219961378194 0.7279270068641853 0.9546394403819943 0.7528197378908168 0.8578683223708999 0.9640080871332031 0.7897807829202987 1.1257077972681804 1.0795010952564201 0.8135191524653806 0.9345680443798078 1.0 10.638636823919601 -6.603223465298149 5.265415183879314 0.9327911344941425 0.8228476906988991 0.24777303966251818 0.10883094119908623 0.30040133117611156 14.425278361943082 0.016779988416487635 0.035574865203226065 2.493311468731062e-07 6.603223465298149 -0.10994344379524346 NGIGPGSHSEFAAS(ph)IGSPK ddPTM_A549_MK2206_60min_R1 1 NGIGPGSHSEFAASIGSPK 19 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHSEFAAS(0.909)IGS(0.091)PK 184.3 6.3206e-44 50499000.0 3028.7 3499.5 4380.2 3492.1 5946.3 4220.6 3847.6 4649.2 7407.2 5922.2 6549.8 True False 3539.870515394314 3677.609602426967 5001.378224573776 4347.664656766326 5071.607147015976 4667.221090592464 4546.659115858903 5308.238337577855 5729.481026867798 4584.370906853468 4923.303894716154 0.71900304980024 0.7469800120146746 1.0158581171358148 0.8830786702873201 1.03012270935763 0.9479855784651997 0.9234975563337704 1.0781862040396948 1.1637471806314574 0.9311574107325693 1.0 12.265411078443387 -4.291973801161144 0.4004883176327874 1.0717724973141094 4.428592650710902e-19 0.5354666984532217 0.08608550716117429 4.924298938703073 0.2972452731018717 0.020488903128387706 2.994571600248785 5.105357971469288e-05 4.291973801161144 -1.0717724973141094 NGIGPGSHSEFAAS(ph)IGSPK ddPTM_A549_PD325901_60min_R1 3 NGIGPGSHSEFAASIGSPK 19 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHSEFAAS(0.966)IGS(0.034)PK;NGIGPGSHSEFAAS(0.734)IGS(0.266)PK;NGIGPGSHSEFAAS(0.992)IGS(0.007)PK 175.71 6.9107e-35 132281000.0 10691.9 11663.7 11707.0 13993.599999999999 15707.699999999999 14590.0 15033.5 16694.7 14888.7 14167.3 16369.3 True False 11777.333817039233 12646.640932758704 12501.507419909909 14857.952890228544 14604.445340623217 14471.18387729908 15605.608069146856 16361.711111761217 14262.97971584893 13272.77426019346 14355.979873542216 0.820378261935615 0.8809319213428414 0.8708223005348411 1.034966127084885 1.0173074544036467 1.0080248095059803 1.0870458308392923 1.139713990677538 0.9935218523212975 0.9245467308473257 1.0 13.809364185221957 -6.23357724107849 6.586844576172545 1.017827551918763 0.8586617671812568 0.6588568977850389 0.05371536533844322 0.09106644634281551 14.53802118739018 0.007188571988513005 0.018819787884291353 5.840133286578971e-07 6.23357724107849 -0.1591657847375062 NGIGPGSHSEFAASIGS(ph)PK ddPTM_A549_MK2206_60min_R1 1 NGIGPGSHSEFAASIGSPK 19 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHSEFAAS(0.023)IGS(0.977)PK 153.59 1.5902e-22 56008000.0 1760.6 2631.7 1981.0 2253.9 2750.8 2248.5 1858.8 2002.3 4357.2 3482.4 3504.1 True False 2057.746237462685 2765.6422891004568 2261.935588073753 2806.1056011814176 2346.160963962725 2486.434777566496 2196.5198993030804 2286.1321567865757 3370.3011570186272 2695.7234213681622 2633.9352617598834 0.7812440447331975 1.050003896926674 0.8587665843246367 1.0653662001193216 0.8907435949641072 0.9439999584139992 0.8339308604857126 0.8679530548746591 1.2795687145198609 1.0234584959263557 1.0 11.363004171378098 -8.744276676749754 24.99975945666568 1.132018570451853 0.9172945024472848 0.37892720820845827 0.10585572849332454 178.21020777324267 259586.76371165726 0.02054043444315193 0.023262628911378123 1.8018694549839666e-09 8.744276676749754 -0.21472406800456822 NGIGPGSHSEFAASIGS(ph)PK ddPTM_A549_PD325901_60min_R1 1 NGIGPGSHSEFAASIGSPK 19 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 NGIGPGSHS(0.004)EFAAS(0.141)IGS(0.855)PK 192.3 1.2768e-44 54227000.0 6596.2 7078.3 8663.5 9082.8 11205.0 10686.0 8756.0 11304.0 9356.0 9520.9 10486.0 True False 7265.841368134212 7674.8131822960095 9251.45720785765 9643.823927464538 10417.999455151494 10598.976758932002 9089.214371467047 11078.532852183556 8962.799856366419 8919.748749153037 9196.288476230733 0.790084106964884 0.8345555059666497 1.0059990214279932 1.04866479040871 1.1328482661324148 1.1525276513809608 0.9883568131817052 1.2046743510512727 0.9746105594155944 0.9699292026568701 1.0 13.16683600699263 -5.740878603471749 3.4976847928310013 1.0287460730001639 0.7987752056915461 0.5776460495794589 0.0777349507040748 0.13944358691722777 3.501507115057926 0.011672730601163145 0.04962284478133852 1.8160232172410606e-06 5.740878603471749 -0.2299708673086177 NGILAS(ph)PQSAPGNLDNSK ddPTM_A549_MK2206_60min_R1 1 NGILASPQSAPGNLDNSK 18 0 Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 NGILAS(0.952)PQS(0.048)APGNLDNSK 150.45 3.5867e-17 4427200.0 1869.0 2218.8 2601.2 2941.8 3564.0 2692.4 3196.7 2996.7 3908.3 3710.8 3262.1 True False 2184.4415073371338 2331.7274427389516 2970.089273951262 3662.54113206242 3039.7403212022527 2977.3079809295236 3777.4990112449727 3421.4914020088536 3023.0762902726287 2872.5277027374727 2452.030540620106 0.8908704321377252 0.9509373574724195 1.2112774391464722 1.4936768002637446 1.2396828958066395 1.2142214102180708 1.5405595275700206 1.3953706307196223 1.2328868830108894 1.1714893657119887 1.0 11.259761232910511 -3.8565432850353005 8.337021679626133 1.1771688152254318 1.1663269443489888 0.0 0.203147826814824 0.0 0.0 0.029495513267719528 0.0 0.00013914151091001283 3.8565432850353005 -0.01084187087644306 NGILAS(ph)PQSAPGNLDNSK ddPTM_A549_PD325901_60min_R1 1 NGILASPQSAPGNLDNSK 18 0 Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 NGILAS(0.998)PQS(0.002)APGNLDNSK 173.34 1.4126999999999998e-54 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NGILASPQS(ph)APGNLDNSK ddPTM_A549_MK2206_60min_R1 1 NGILASPQSAPGNLDNSK 18 0 Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 NGILAS(0.001)PQS(0.999)APGNLDNSK 120.29 3.1862000000000003e-10 1998500.0 497.69 1214.5 1145.8 743.04 1610.7 1325.5 1095.4 1074.0 1910.8 1416.0 1552.9 True False 581.6879046477359 1276.3128624510791 1308.2916692654758 925.0848333563325 1373.768163681388 1465.7635302043104 1294.420000912735 1226.2427889870555 1478.0068509205898 1096.1246165452892 1167.2720721403277 0.49833103912196247 1.0934150597048147 1.1208112491431175 0.7925186042188802 1.1769048506081585 1.2557171247288255 1.1089274144452603 1.0505201128804513 1.2662059567744939 0.9390480957326586 1.0 10.18892515365883 -5.261354492658653 5.831509312493199 1.1114331605032832 0.4799851363605673 0.6029483972279487 0.13372453052837904 0.06763268902113682 10.196949458152076 0.01869381018547085 0.16866477704884864 5.478296167148452e-06 5.261354492658653 -0.631448024142716 NGILASPQS(ph)APGNLDNSK ddPTM_A549_PD325901_60min_R1 1 NGILASPQSAPGNLDNSK 18 0 Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 NGILASPQS(1)APGNLDNSK 158.15 1.1968000000000001e-22 10615000.0 1409.0 1220.2 1427.7 1981.6 2125.4 1739.9 1815.9 2001.7 1882.9 1717.5 1772.6 True False 1552.0406427490216 1323.0305362922727 1524.5923074575371 2103.998931459872 1976.1192362319487 1725.7308312620073 1885.0050681986093 1961.7745231967288 1803.768260961129 1609.0567568896172 1554.5814374372112 0.9983656084994954 0.8510525755880249 0.9807091933188702 1.3534182776094363 1.2711583894180927 1.1100935529675067 1.212548292938654 1.261931009822677 1.1602919072124727 1.0350417920480324 1.0 10.602310479539447 -6.016943310979455 24.61926920963238 1.132802790665235 0.9225019952167977 0.44666072242908594 0.10878350867315478 497.3661169640484 722695.0265838511 0.01763269740427562 0.04797880424054969 9.61737807070878e-07 6.016943310979455 -0.21030079544843727 NGIS(ph)PPNK ddPTM_A549_PD325901_60min_R1 1 NGISPPNK 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 NGIS(1)PPNK 63.076 0.010062 4398200.0 3014.0 3099.3 3565.9 3150.2 3958.0 3772.4 3515.5 3433.7 3781.9 3733.1 4169.7 True False 3319.9790612104703 3360.488887994296 3807.9034174986564 3344.780699376712 3680.0037343587323 3741.678825135234 3649.284276255414 3365.21215981446 3622.9598949115175 3497.3914289051663 3656.8533339060923 0.9078786481338622 0.9189564308844641 1.0413060272863661 0.9146608829958084 1.0063306888023074 1.0231963066286103 0.9979301719375786 0.9202480527759876 0.9907315290224201 0.9563936831913913 1.0 11.836387050064497 -5.646994283756522 8.068486904468406 0.9900682691154886 0.9109515491762122 0.32565128750357364 0.03797712154403194 0.1579446092754616 10.396116743742267 0.004665907763366318 0.01821842409369373 2.2542688829530833e-06 5.646994283756522 -0.07911671993927638 NGIS(ph)PTNPTK ddPTM_A549_MK2206_60min_R1 2 NGISPTNPTK 10 0 Q9UJF2-2;Q9UJF2;A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8 Q9UJF2-2;A0A3B3ITG3 RASAL2;DAB2IP Ras GTPase-activating protein nGAP;Disabled homolog 2-interacting protein 1 NGIS(0.976)PT(0.024)NPTK;NGIS(0.743)PT(0.257)NPTK 122.39 4.3348e-12 7353600.0 2670.0 4002.2 3710.1 3376.0 4124.6 3488.5 3833.0 3124.0 5171.5 5001.6 4735.2 True False 3120.630724767333 4205.894885221665 4236.247968355594 4203.120151554401 3517.876803824581 3857.650754521112 4529.406484844362 3566.8365668487545 4000.1635071885203 3871.735086237938 3559.3191551283912 0.8767493413090027 1.1816571377595249 1.190184915632491 1.1808775690986852 0.9883566633118307 1.08381704095371 1.2725485654519728 1.0021120364296447 1.123856370515396 1.0877740706841101 1.0 11.797385586118098 -10.825210881641874 0.7648155232231229 0.9898175647009795 1.1077857028082747 0.009794814123145534 0.10935353776793938 1.4364894226496618 1.2700198130863616 0.10875261960710436 0.019122186109153658 1.4955093009339367e-11 10.825210881641874 0.11796813810729523 NGIS(ph)PTNPTK ddPTM_A549_PD325901_60min_R1 2 NGISPTNPTK 10 0 Q9UJF2-2;Q9UJF2;A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8 Q9UJF2-2;A0A3B3ITG3 RASAL2;DAB2IP Ras GTPase-activating protein nGAP;Disabled homolog 2-interacting protein 1 NGIS(0.955)PT(0.044)NPTK;NGIS(0.89)PT(0.107)NPT(0.003)K 111.26 0.00016531 23313000.0 5767.799999999999 6662.2 7582.9 7549.9 8973.2 8114.700000000001 8449.4 8808.5 8233.599999999999 7329.8 7432.1 True False 6353.342809970055 7223.6469749929365 8097.521193681976 8016.24017593303 8342.95338785947 8048.616573620215 8770.946540689087 8632.807557365424 7887.570425115271 6866.995177088503 6517.998815963609 0.9747382577624462 1.1082614739513428 1.2423324124959747 1.2298621712388151 1.2799869443710636 1.2348294009977236 1.345650220004283 1.3244567544600214 1.2101214878709958 1.0535434833572148 1.0 12.670213374663758 -10.385085527087979 0.9090287542056971 1.0091238420613953 1.2215781664849978 0.34976598316973784 0.09852282322056845 0.43729617348029826 0.688863979142791 0.054808426386238375 0.01951493022710261 4.1201637132327397e-11 10.385085527087979 0.21245432442360257 NGKEQYVPPRS(ph)PK ddPTM_A549_MK2206_60min_R1 5 NGKEQYVPPRSPK 13 2 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 NGKEQYVPPRS(1)PK;NGKEQY(0.003)VPPRS(0.997)PK;NGKEQYVPPRS(1)PK;NGKEQY(0.02)VPPRS(0.98)PK;NGKEQY(0.003)VPPRS(0.997)PK 72.184 0.00037987 145941000.0 20425.4 30119.8 31234.000000000004 30744.8 46369.700000000004 32163.6 27912.3 27602.6 48434.0 41905.5 41558.2 True False 23872.70816691486 31652.76916793252 35663.45086213812 38277.2773801865 39548.77855557016 35567.130803530265 32983.603607336634 31515.353079417237 37463.77633320484 32439.018445366288 31238.151992029183 0.7642164034865535 1.013272781821701 1.141663273526491 1.2253374460164428 1.2660409157898183 1.1385798626181753 1.0558756361692851 1.0088737991754053 1.19929553908196 1.0384423013769675 1.0 14.931021487613359 -5.321476536996764 2.667879382991394 1.1128909471870478 0.7193396257766621 0.6002218276347517 0.08419843100887989 0.24514634475601738 2.474180242036615 0.013830253864891107 0.19940057391304825 4.770055839176053e-06 5.321476536996764 -0.39355132141038573 NGKEQYVPPRS(ph)PK ddPTM_A549_PD325901_60min_R1 4 NGKEQYVPPRSPK 13 2 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 NGKEQYVPPRS(1)PK;NGKEQYVPPRS(1)PK;NGKEQYVPPRS(1)PK;NGKEQY(0.003)VPPRS(0.997)PK 90.714 3.7798e-05 231093000.0 37265.1 37357.2 44769.0 46568.6 48771.700000000004 62510.5 54755.5 59828.4 63506.8 57570.5 60426.899999999994 True False 41048.225518883344 40505.42234910479 47807.293557866804 49445.03665703587 45346.144045230874 62001.4352132902 56839.25051585932 58635.07562752813 60837.830046845935 53935.488804956985 52994.77437767944 0.774571191233757 0.7643286121086881 0.9021133521044384 0.9330172123133208 0.8556719898845339 1.1699537537686777 1.0725444382644473 1.1064312720656528 1.1479967744229111 1.0177510790134388 1.0 15.69356248731791 -6.648166954326891 0.997320501845045 1.0797997485572413 0.7815811855019401 0.7254745724496645 0.07117943030952235 0.2502408428936349 0.4629771160882428 0.012692032532885403 0.04692933844456552 2.248190175711283e-07 6.648166954326891 -0.29821856305530114 NGLAAELGPAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NGLAAELGPASPR 13 0 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 NGLAAELGPAS(1)PR;NGLAAELGPAS(1)PR 136.33 1.7914e-08 17265200.0 1433.71 1757.81 1571.72 1569.22 2497.8 1580.03 1628.99 1956.5900000000001 2542.6 2182.3 2641.37 True False 1675.685197155871 1847.2750207864399 1794.6135297765168 1953.678970444962 2130.3769288156523 1747.2277258609693 1924.9563970119013 2233.942624305571 1966.7051596978688 1689.316914326827 1985.4449308965777 0.8439847265867874 0.9304085910618817 0.9038848178811556 0.9840005834675701 1.0729972388877222 0.8800182259761616 0.9695340158050311 1.1251597007511953 0.9905614248438276 0.8508505514499328 1.0 10.955246630906386 -5.352356051385392 0.7396545416769804 1.0010974901854424 0.7732384246349701 0.21190083807871318 0.07524958241641884 1.8769812881823966 0.7749292278985277 0.009406299904309759 0.3443614812067099 4.442668909731516e-06 5.352356051385392 -0.2278590655504723 NGLAAELGPAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NGLAAELGPASPR 13 0 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 NGLAAELGPAS(1)PR;NGLAAELGPAS(1)PR 198.87 1.8891999999999997e-30 42510000.0 11617.5 12114.5 12883.8 12965.3 15510.8 15324.2 13969.2 16242.400000000001 15183.1 15011.0 14990.099999999999 True False 12796.900047648518 13135.43143084145 13758.17214458319 13766.137134667279 14421.374917355084 15199.404795922312 14500.805550239547 15918.432590083705 14545.00710765251 14063.202898206706 13146.412730073067 0.9734138361847546 0.999164692341775 1.0465343228659398 1.0471401908124003 1.0969817556667363 1.1561636705009972 1.1030237562120837 1.210857510480369 1.106386008586212 1.0697369074710728 1.0 13.682381563662588 -5.807419941096261 1.4515125044608368 1.0777151601563624 0.9693484548033522 0.35817488790602203 0.05432854315255857 0.6671473914383094 2.2770587210067097 0.010125224135761416 0.0778433453616087 1.5580452222156403e-06 5.807419941096261 -0.10836670535301018 NGLAAELGPAS(ph)PRR ddPTM_A549_PD325901_60min_R1 2 NGLAAELGPASPRR 14 1 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 NGLAAELGPAS(1)PRR;NGLAAELGPAS(1)PRR 82.449 0.00015821 22323000.0 2622.6 2383.1 2481.7 2719.7 2829.2 2760.1 2516.1000000000004 2887.8 2720.8 3160.2 2677.2 True False 2888.8444213439225 2583.932200490177 2650.1230856744187 2887.68969211315 2630.4867522101385 2737.622660708238 2611.851562362751 2830.2005635647242 2606.454237836869 2960.664432676893 2347.921372169075 1.2303838005763914 1.1005190510715734 1.128710321004558 1.2298919914193815 1.1203470369112156 1.165977146065648 1.1124101485348505 1.205406874826522 1.1101113813828247 1.2609725639754916 1.0 11.19716838055421 -9.95614963141955 0.565490838768105 0.9962651197446871 1.1619240756198423 0.0 0.0886078326882733 0.3789702988498375 0.2404635859422886 0.028798130559972056 0.010517122544411398 1.1062425745160954e-10 9.95614963141955 0.16565895587515522 NGLAEGT(ph)EQEEEEEDEQVR ddPTM_A549_PD325901_60min_R1 1 NGLAEGTEQEEEEEDEQVR 19 0 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 NGLAEGT(1)EQEEEEEDEQVR 99.569 3.7115000000000004e-07 734380.0 202.14 0.0 273.44 231.37 372.19 0.0 0.0 267.26 219.64 272.25 283.05 True False 222.66110399239693 0.0 291.99728272829657 245.661199420605 346.04865838579514 0.0 0.0 261.9292896385861 210.40929461867464 255.0600885375243 248.236644401784 0.8969711322394782 0.0 1.1762859727336779 0.9896250411079095 1.394027296895366 0.0 0.0 1.055159645224014 0.8476157705311074 1.0274876586097266 1.0 7.9555722899105135 NGLHRPVS(ph)TDFAQYNSYGDVSGGVR ddPTM_A549_PD325901_60min_R1 4 NGLHRPVSTDFAQYNSYGDVSGGVR 25 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 NGLHRPVS(0.839)T(0.161)DFAQYNSYGDVSGGVR;NGLHRPVS(0.791)T(0.209)DFAQYNSYGDVSGGVR;NGLHRPVS(0.822)T(0.178)DFAQYNSYGDVSGGVR;NGLHRPVS(0.833)T(0.167)DFAQYNSYGDVSGGVR 176.84 1.0174999999999999e-48 51741000.0 7687.799999999999 7059.0 7663.7 9530.3 8253.2 8236.5 7723.6 8864.699999999999 8611.7 8447.0 9244.0 True False 8468.259796540757 7653.886703562658 8183.804767571844 10118.964986118306 7673.52370399432 8169.424674802876 8017.525824516095 8687.88660427738 8249.780196993448 7913.654978425964 8107.046602544049 1.0445554604167882 0.9441029611401042 1.0094680799051665 1.2481690906948657 0.9465251749738695 1.0076943029091818 0.9889576583906817 1.0716463134122185 1.0176061149574012 0.9761452433174126 1.0 12.984960720943906 NGLPGS(ph)RPGSPER ddPTM_A549_PD325901_60min_R1 1 NGLPGSRPGSPER 13 1 Q92993-4;E9PRM3;Q92993-2;Q92993-3;E9PRL6;Q92993;H0YEP0 Q92993-4 KAT5 Histone acetyltransferase KAT5 1 NGLPGS(0.547)RPGS(0.453)PER 55.589 0.0048665 48964000.0 5645.5 5994.1 5601.9 6672.2 7698.1 7640.4 7653.9 7726.0 7180.7 6885.8 7520.4 True False 6218.627004002557 6499.243843295779 5982.078620961248 7084.326640334356 7157.412013003282 7578.179115566543 7945.17335287479 7571.89886907025 6878.9201505568935 6451.02941286202 6595.438475743426 0.9428678664615402 0.9854149753952781 0.9070024143143809 1.0741251952222666 1.0852063951967212 1.1490030789366652 1.2046467239585954 1.1480508683263486 1.0429814751295232 0.9781047062431844 1.0 12.687252860098333 -6.270631012791009 24.19198900678511 1.0597084022863779 0.9491270736316051 0.4230121317093717 0.06827588913668907 414.95804509387267 1092153.9802185677 0.011346614727350534 0.026727765631070353 5.362520768924706e-07 6.270631012791009 -0.11058132865477277 NGLPGSRPGS(ph)PER ddPTM_A549_MK2206_60min_R1 3 NGLPGSRPGSPER 13 1 Q92993-4;E9PRM3;Q92993-2;Q92993-3;E9PRL6;Q92993;H0YEP0 Q92993-4 KAT5 Histone acetyltransferase KAT5 1 NGLPGS(0.016)RPGS(0.984)PER;NGLPGS(0.078)RPGS(0.922)PER;NGLPGS(0.036)RPGS(0.964)PER 85.837 0.00022358 45184400.0 2472.1 3352.9999999999995 3059.1499999999996 3255.53 5462.9 4544.6 3416.3 3845.6000000000004 6242.3 6245.6 5504.4 True False 2889.3300429578 3523.65337817906 3492.9834700938027 4053.134996146298 4659.314646659873 5025.506555538668 4036.997488696528 4390.725576656074 4828.429016904747 4834.714622242418 4137.505566288376 0.6983265633524514 0.8516371329839725 0.8442244763497071 0.9796083488492405 1.126116828608788 1.2146223068521185 0.9757080501810633 1.0612011286295027 1.1669903374259811 1.168509514919997 1.0 12.0145455374765 -6.248373852171298 1.7357001161511496 1.0843116563655624 0.7706844137300323 0.7514571835568958 0.07658699544843521 0.16058124364605073 0.9121750414393982 0.01222143888568831 0.04393269429161088 5.644508713847218e-07 6.248373852171298 -0.3136272426355301 NGLPGSRPGS(ph)PER ddPTM_A549_PD325901_60min_R1 2 NGLPGSRPGSPER 13 1 Q92993-4;E9PRM3;Q92993-2;Q92993-3;E9PRL6;Q92993;H0YEP0 Q92993-4 KAT5 Histone acetyltransferase KAT5 1 NGLPGS(0.168)RPGS(0.832)PER;NGLPGS(0.082)RPGS(0.918)PER 78.166 0.00023975 67422000.0 8340.5 8582.3 8314.6 8578.0 10666.0 9607.7 9375.2 10166.1 10109.099999999999 9283.0 9750.7 True False 9187.221420048412 9305.560540584469 8878.878755751513 9107.843577948519 9916.856955702446 9529.45807662278 9731.978366306286 9963.329160348836 9684.249682342208 8696.869795753311 8551.425714779994 1.0743496729638347 1.0881881981972963 1.0382922160459818 1.0650672626678883 1.1596729348373438 1.1143706785819805 1.1380533130850758 1.1651073742158053 1.1324719415622448 1.017008167506143 1.0 13.0619492543881 -4.346139324849823 16.232910407133733 1.083566939375223 1.0908134827372578 0.0 0.054491163320830704 0.0 0.0 0.008559806609767327 0.0 4.506721024375819e-05 4.346139324849823 0.007246543362034785 NGLPGSRPGS(ph)PEREVK ddPTM_A549_PD325901_60min_R1 1 NGLPGSRPGSPEREVK 16 2 Q92993-4;E9PRM3;Q92993-2 Q92993-4 KAT5 Histone acetyltransferase KAT5 1 NGLPGS(0.174)RPGS(0.826)PEREVK 65.25 0.00058679 10635000.0 3747.8 3345.2 4108.8 4139.3 3640.4 4968.4 4505.3 4491.7 4579.0 4596.4 4860.8 True False 4128.2738970154605 3627.1117439804207 4387.647876221565 4394.975159967629 3384.7108626982154 4927.938997667772 4676.751656894759 4402.109519829515 4386.560553901431 4306.182519573466 4262.952415149944 0.968407219922077 0.8508449991349111 1.0292509624617132 1.0309697908774433 0.7939827924584428 1.1559920256568097 1.0970686982745175 1.0326433633612766 1.0289958992533441 1.0101408836443702 1.0 12.057637236090995 -7.270066309896684 24.99891983054725 1.0314322980045099 0.9406351669518647 0.3451443992015142 0.07840777926496487 713.0805988891306 2066346.7982730987 0.011599995256504451 0.01872549327211343 5.369498063704396e-08 7.270066309896684 -0.0907971310526452 NGLQSCPIKEDS(ph)FLQR ddPTM_A549_MK2206_60min_R1 2 NGLQSCPIKEDSFLQR 16 1 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 NGLQSCPIKEDS(1)FLQR;NGLQSCPIKEDS(1)FLQR 178.32 3.9718999999999997e-29 43625000.0 5856.0 9560.7 9445.6 7951.4 11303.8 10978.2 9504.0 9780.4 13657.099999999999 12645.7 12366.099999999999 True False 6844.3496345458825 10047.298792948573 10785.128112422744 9899.493356951903 9641.025994053318 12139.90583726062 11230.753778231372 11166.801651218804 10563.788655907254 9789.027587179926 9295.25608300245 0.7363271730685979 1.0809060775981554 1.160283053647625 1.0650049088001328 1.037198535248873 1.306032424373974 1.2082242466421365 1.2013441643247151 1.136470965573985 1.0531208069759799 1.0 13.18227889640055 -5.26386095976307 4.909270158937003 1.1039733801459621 0.7178038872962589 0.611330677804481 0.0878016448389752 0.1036266492504253 7.448571116244813 0.013908276320896883 0.13542541804746314 5.4467700435114656e-06 5.26386095976307 -0.38616949284970326 NGLQSCPIKEDS(ph)FLQR ddPTM_A549_PD325901_60min_R1 2 NGLQSCPIKEDSFLQR 16 1 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 NGLQSCPIKEDS(1)FLQR;NGLQSCPIKEDS(1)FLQR 166.06 1.1093e-21 70324000.0 9095.2 9489.2 11800.1 10744.2 11084.0 9959.5 11866.1 12159.1 7440.2 9792.2 11737.8 True False 10018.538008467642 10288.888186350297 12600.925745765691 11407.844832151377 10305.49807772415 9878.393134061705 12317.670928879075 11916.577211870583 7127.514267992454 9173.91882085269 10294.125012044726 0.9732287102347571 0.9994912801536506 1.2240890538070865 1.1081898479767376 1.001104811304129 0.9596146464612981 1.1965728912818412 1.1576095295061497 0.692386604947273 0.891180047854351 1.0 13.329533587428203 -8.747886734999502 24.999786696177658 0.8547381089001894 1.0782921683680962 0.44236866530316754 0.10808645181608444 185.3158024265952 341841.1946472161 0.02320625288861133 0.02624292066616383 1.786953555685333e-09 8.747886734999502 0.22355405946790674 NGLSLAALKK ddPTM_A549_PD325901_60min_R1 2 NGLSLAALKK 10 1 P16401 P16401 HIST1H1B Histone H1.5 0 ; 83.045 0.00014406 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NGNGGPGPYVGQAGTAT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 NGNGGPGPYVGQAGTATLPR 20 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 NGNGGPGPYVGQAGTAT(1)LPR;NGNGGPGPYVGQAGT(0.007)AT(0.993)LPR 303.05 1.6128999999999992e-162 167068000.0 5462.700000000001 6414.9 7018.299999999999 6746.0 9332.0 8390.2 6974.6 7152.0 12359.8 11007.5 9953.8 True False 6384.67020980768 6741.391009746752 8013.600473386177 8398.770302839444 7959.275162025645 9278.045395035984 8241.794539315291 8165.8179020814005 9560.325034544843 8520.898104959235 7481.996749095491 0.8533377417705417 0.9010149610879914 1.0710510498891825 1.1225306003848214 1.0637902459644684 1.2400493753432358 1.1015501363739102 1.0913955426495712 1.2777772238006657 1.1388534893428466 1.0 12.869207623704417 -5.773269909445407 2.0001270880847093 1.1318794422764578 0.845173817032795 0.6399699418414371 0.07252863846807693 0.23595902312924225 1.7345093515938255 0.014384033979445633 0.08513561173682553 1.6855051760979106e-06 5.773269909445407 -0.2867056252436627 NGNGGPGPYVGQAGTAT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 NGNGGPGPYVGQAGTATLPR 20 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 NGNGGPGPYVGQAGTAT(1)LPR;NGNGGPGPYVGQAGT(0.025)AT(0.975)LPR 244.6 1.0660999999999996e-85 285280000.0 8690.4 8994.599999999999 10473.2 10537.4 11934.0 11051.2 9686.1 11516.1 11884.099999999999 11638.2 12332.8 True False 9572.643010465648 9752.606508551444 11183.974332467806 11188.27126582825 11095.797010064964 10961.202691213677 10054.709835937298 11286.402351294319 11384.652605070974 10903.362065812358 10815.943784060486 0.8850492570581685 0.9016879805647577 1.0340266698639549 1.0344239475723298 1.0258741383638568 1.0134300723129923 0.929619276567892 1.0434967652038973 1.0525806006729248 1.008082353560371 1.0 13.400871937884633 -5.739992743243208 7.925082104804653 1.020614896395018 0.8924224353220994 0.6884876794811792 0.031608314640985624 0.0769951380817387 20.947256674613044 0.004663428288088003 0.017440020514641653 1.8197312647915945e-06 5.739992743243208 -0.12819246107291848 NGNGLKNT(ph)PR ddPTM_A549_MK2206_60min_R1 1 NGNGLKNTPR 10 1 V9GYG6;V9GZ41;A0A0G2JM70;Q9NV79-3;Q9NV79-2;Q9NV79 V9GYG6 PCMTD2 Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 1 NGNGLKNT(1)PR 49.934 0.022928999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NGNGLKNT(ph)PR ddPTM_A549_PD325901_60min_R1 2 NGNGLKNTPR 10 1 V9GYG6;V9GZ41;A0A0G2JM70;Q9NV79-3;Q9NV79-2;Q9NV79 V9GYG6 PCMTD2 Protein-L-isoaspartate O-methyltransferase domain-containing protein 2 1 NGNGLKNT(1)PR;NGNGLKNT(1)PR 53.6 0.0082588 18753700.0 5827.299999999999 5631.299999999999 5658.5 6466.2 7573.599999999999 6896.5 5998.9 7093.4 7287.0 6595.0 7114.6 True False 6418.883206168473 6105.869414049067 6042.5198373246985 6865.6024881942985 7041.6564635015975 6840.337190527285 6227.191422224037 6951.91657233535 6980.7527312250995 6178.59057449026 6239.549303165285 1.0287414834453208 0.9785753934104819 0.9684224843386309 1.100336283056762 1.1285520990962294 1.0962870646854612 0.9980194273110432 1.1141696674804196 1.1187911805879645 0.9902302673297091 1.0 12.607226108369613 -6.2566506505380435 24.98689120551314 1.067631484685107 0.9905793454050693 0.31326622207507104 0.05035091547696548 418.97191943821826 2186126.0590717914 0.007794065161348881 0.019955008324952162 5.537954069176757e-07 6.2566506505380435 -0.07705213928003762 NGNHVANS(ph)PVSIMVVQSEIGDAR ddPTM_A549_MK2206_60min_R1 1 NGNHVANSPVSIMVVQSEIGDAR 23 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 NGNHVANS(0.997)PVS(0.003)IMVVQSEIGDAR 74.65 3.5415e-05 2457100.0 606.31 867.27 814.49 715.81 1044.8 1163.9 812.83 742.97 1163.4 787.7 1539.0 True False 708.6403051437009 911.410338590324 929.9969293943417 891.1834821339318 891.1113040381907 1287.0631254657092 960.5106895580598 848.2882727501976 899.8917575680417 609.758022918591 1156.8238257608105 0.6125740924100073 0.7878557808842804 0.8039226965114665 0.7703709608053979 0.7703085674710511 1.112583521193682 0.8302998850549771 0.733290803543316 0.7778987063792607 0.5270967016240095 1.0 10.175953455888955 -14.999999999999998 0.23641419015783402 2.1396608238860555 0.7790172077472554 0.0 0.18160679762024703 43.339008151600765 0.5478045271323573 23.098550474445137 0.067207843932525 1.000000000000004e-15 14.999999999999998 -1.3606436161388 NGNHVANS(ph)PVSIMVVQSEIGDAR ddPTM_A549_PD325901_60min_R1 2 NGNHVANSPVSIMVVQSEIGDAR 23 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 NGNHVANS(1)PVSIMVVQSEIGDAR;NGNHVANS(0.999)PVS(0.001)IMVVQSEIGDAR 118.43 8.507999999999999e-16 6013900.0 1852.44 1633.71 1824.0 1644.71 1872.3600000000001 1798.1 1660.4299999999998 1697.68 1249.77 2051.9 1863.6100000000001 True False 2040.498345105747 1771.388475205744 1947.7876086030305 1746.300001292576 1740.8518928913386 1783.4568697581542 1723.6185722721584 1663.8184405958038 1197.2465130922462 1922.3426838205544 1634.3977843971345 1.2484710665821217 1.0838172274316562 1.191746358932745 1.0684669411349685 1.0651335369580612 1.0912012282346564 1.05458939600064 1.0180009153705023 0.7325306755318832 1.1761779795422518 1.0 10.674543438118116 -8.476780073299341 3.3756566245046327 0.8736047150370561 1.1112272118630837 0.09120111470277048 0.12201438811265874 0.1507738971264278 3.476317320240515 0.018327873855551027 0.021829629691621624 3.3359530263878457e-09 8.476780073299341 0.23762249682602765 NGNPTFAAVTAGYDKS(ph)PGGNGFAK ddPTM_A549_MK2206_60min_R1 1 NGNPTFAAVTAGYDKSPGGNGFAK 24 1 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 NGNPT(0.002)FAAVT(0.031)AGY(0.015)DKS(0.953)PGGNGFAK 43.31 0.013256 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NGNPTFAAVTAGYDKS(ph)PGGNGFAK ddPTM_A549_PD325901_60min_R1 1 NGNPTFAAVTAGYDKSPGGNGFAK 24 1 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 NGNPTFAAVTAGYDKS(1)PGGNGFAK 107.75 1.6997e-11 3994100.0 2038.6 2049.7 2311.8 2353.5 2612.7 3463.3 2473.0 3355.8 2675.5 2750.0 2873.1 True False 2245.557171261998 2222.4354124227752 2468.692649982722 2498.870349813692 2429.1929653256852 3435.0960330534554 2567.111368277524 3288.8659364258283 2563.0580393018763 2576.364530682062 2519.72691408149 0.891190691623249 0.8820143960850274 0.9797461130356773 0.9917226886170715 0.9640699362102075 1.3632810817142231 1.0188053927317384 1.305246976585441 1.0171967545285285 1.0224776805311928 1.0 11.299051668764582 -6.157038388096368 1.4207468675297765 1.0552537135679587 0.8832981837853427 0.2642181441869115 0.12579384176810973 0.5921960507199792 2.149651549109356 0.019210432071552475 0.08873036381905403 6.965649407198768e-07 6.157038388096368 -0.17195552978261597 NGPLPIPSEGS(ph)GFTK ddPTM_A549_MK2206_60min_R1 2 NGPLPIPSEGSGFTK 15 0 R4GMY1;J3KN16;Q5VYK3 R4GMY1 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog 1 NGPLPIPS(0.14)EGS(0.836)GFT(0.024)K;NGPLPIPS(0.015)EGS(0.975)GFT(0.01)K 78.69 0.0004914 6250600.0 2342.1 2763.7 2816.4 2689.0 4363.9 3847.8999999999996 3235.2 2877.3 4938.2 4161.6 4159.8 True False 2737.389221152649 2904.360525282874 3215.807869889408 3347.8051207137964 3721.9760908233734 4255.082223970703 3822.9939628929014 3285.166086361692 3819.7055846849776 3221.4916696432747 3126.8068553605067 0.8754583662434245 0.9288583080543407 1.0284638670202224 1.0706785790028626 1.1903440995859804 1.3608394828340338 1.2226511389211239 1.0506456709117478 1.221599465965282 1.030281631921218 1.0 11.610474390583326 -5.940518108781656 1.62318297245495 1.135123869318124 0.8799311798675912 0.479589885707859 0.09912718852064012 0.3523277611283792 1.6683388325442026 0.01710138123207031 0.09364296603189 1.1467847029315206e-06 5.940518108781656 -0.25519268945053286 NGPLPIPSEGS(ph)GFTK ddPTM_A549_PD325901_60min_R1 2 NGPLPIPSEGSGFTK 15 0 R4GMY1;J3KN16;Q5VYK3 R4GMY1 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog 1 NGPLPIPS(0.001)EGS(0.987)GFT(0.012)K;NGPLPIPS(0.005)EGS(0.991)GFT(0.005)K 112.17 1.8997999999999998e-06 7801800.0 3913.5 3596.1 3900.1 4143.2 4550.4 4373.3 4056.3999999999996 4540.1 4936.700000000001 4381.9 4851.6 True False 4310.795639033568 3899.1559675140456 4164.784239206516 4399.116054110083 4230.795602027787 4337.685294762991 4210.768521747251 4449.544143860452 4729.227666836692 4105.226086180269 4254.88395682634 1.013140589208673 0.9163953722541408 0.978824400727716 1.0338980096160655 0.994338657636031 1.0194603046233044 0.9896318124003564 1.0457498227940643 1.111482173150536 0.964826803230211 1.0 12.054904070581763 -7.153503032707458 0.7597741868966664 1.0508294508029516 0.9689440388999125 0.05342068095573116 0.04602783950879914 0.6580398483092037 0.727856096561085 0.009100832790566091 0.02638281847197463 7.022584398009168e-08 7.153503032707458 -0.08188541190303911 NGPSSS(ph)PFSSPASSR ddPTM_A549_MK2206_60min_R1 3 NGPSSSPFSSPASSR 15 0 A8CG34;A8CG34-2;A6NF01;C9JFL1;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 NGPSS(0.027)S(0.966)PFS(0.006)SPASSR;NGPSS(0.036)S(0.961)PFS(0.002)SPASSR;NGPS(0.002)S(0.076)S(0.915)PFS(0.006)S(0.001)PASSR 169.67 3.616400000000001e-27 25048500.0 11472.8 13095.7 12986.0 11827.7 17513.899999999998 14068.6 13044.6 13511.099999999999 20241.6 19656.0 20327.0 True False 13409.128156970286 13762.215193742783 14827.610069018554 14725.487030965633 14937.628510523045 15557.329914019127 15414.634967962636 15426.339801008384 15656.909919193107 15215.69594831512 15279.244903339844 0.8776041121010649 0.9007130444472777 0.9704412857324796 0.963757510539466 0.9776418013469942 1.0182001802077598 1.0088610442125447 1.009627105174313 1.0247175183225652 0.9958408314398552 1.0 13.899285627037976 -5.455667089104829 0.6374892253366319 1.0123420237531024 0.8031811154963169 0.9160029481983307 0.013211022058885497 0.49025589670403646 0.15627630447423194 0.0023224267484582115 0.07078513674366932 3.502135223199064e-06 5.455667089104829 -0.20916090825678557 NGQAEAEEATEQTHIS(ph)PNAIFK ddPTM_A549_MK2206_60min_R1 2 NGQAEAEEATEQTHISPNAIFK 22 0 P48436 P48436 SOX9 Transcription factor SOX-9 1 NGQAEAEEATEQT(0.009)HIS(0.991)PNAIFK;NGQAEAEEATEQT(0.024)HIS(0.976)PNAIFK 136.88 1.0951000000000001e-22 9215800.0 2772.6 2724.6000000000004 3183.6 3018.2 4222.4 3087.1 3068.6 3049.5 4680.6 4156.6 4862.3 True False 3240.5470964381657 2863.2705022924747 3635.0823514344297 3757.6591354921457 3601.2905533794565 3413.7748729488667 3626.124899398229 3481.775963702071 3620.451573382306 3217.621173115928 3654.856717346842 0.8866413506876312 0.7834152536548681 0.9945895646692364 1.0281276192462971 0.9853438402350638 0.9340379492159728 0.9921387293208391 0.952643628182936 0.9905864588887328 0.8803686223441571 1.0 11.83559913345949 -5.772277364933679 24.999280748280977 0.9897248771441576 0.8350283047600907 0.5509651597095289 0.04611492142924959 55.82460231990275 128768.10829978858 0.004162145295210452 0.013126189465093911 1.6893616654651376e-06 5.772277364933679 -0.15469657238406687 NGQAEAEEATEQTHIS(ph)PNAIFK ddPTM_A549_PD325901_60min_R1 1 NGQAEAEEATEQTHISPNAIFK 22 0 P48436 P48436 SOX9 Transcription factor SOX-9 1 NGQAEAEEATEQT(0.033)HIS(0.966)PNAIFK 116.24 1.8775e-15 8330700.0 1853.1 1695.8 1801.9 2230.2 2897.6 2459.9 2244.0 2681.5 2094.4 2169.0 2588.7 True False 2041.2253478198822 1838.711017410618 1924.1877697049345 2367.9543888483076 2694.0825721773303 2439.8673899772466 2329.3966479639175 2628.015378903946 2006.3796514721923 2032.0489698361432 2270.3063111213496 0.899096891824998 0.8098955671327196 0.8475454436606573 1.043010970479454 1.1866603898249612 1.074686432410148 1.0260274732766708 1.157559826191875 0.8837484359021146 0.8950549799742545 1.0 11.148671244611219 -6.249492248542008 23.178129447047525 0.9967185927627574 0.8479508766332923 0.3824777648414187 0.09448500308341949 298.40807627034246 578923.8923600062 0.015165478553266217 0.039710728891281244 5.629991659341635e-07 6.249492248542008 -0.14876771612946516 NGQDLGVAFK ddPTM_A549_PD325901_60min_R1 1 NGQDLGVAFK 10 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 97.456 0.0014265999999999999 4901100.0 2918.5 2449.3 2507.2 2499.8 3055.4 3068.4 2920.0 2560.9 3009.1 2843.9 3481.7 False True 3214.783971513855 2655.711106819099 2677.353669018378 2654.2069685422844 2840.7992445577747 3043.411967724776 3031.12219788531 2509.820840512814 2882.6379914271242 2664.335668656991 3053.4729723147548 1.0528286972446377 0.8697346041369662 0.8768224553789807 0.8692420049587675 0.930350217707754 0.9967050618488521 0.992680212128257 0.821956134299819 0.9440522374238914 0.8725591131193903 1.0 11.576235359946399 -10.004998642056316 0.8892749061420643 0.9947988195202201 0.9248654722308365 0.0 0.07415439854800897 0.7278544065914678 1.1648782850890202 0.025906089426764006 0.012669145217858415 9.8855618565069e-11 10.004998642056316 -0.06993334728938361 NGQIDKEAVQK ddPTM_A549_MK2206_60min_R1 1 NGQIDKEAVQK 11 1 Q01813;Q01813-2;Q5VSR5 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 46.73 0.033868 1904200.0 1172.1 1520.2 1620.8 1311.0 1852.4 1151.3 1208.8 981.99 2062.4 1949.7 1727.6 False True 1369.9218249062892 1597.571686700808 1850.6538117869454 1632.1950588530271 1579.9144138594427 1273.129801828912 1428.4233130393598 1121.1900897182484 1595.2696929760425 1509.2614158745412 1298.5892406656121 1.0549308295547823 1.230236349318548 1.425126401662133 1.25689864642373 1.2166390759942174 0.9803945404447902 1.0999808625452643 0.8633908664941387 1.2284636611946378 1.1622315730114519 1.0 10.342729445880405 -7.091222477449804 6.345295514900205 1.0815364389162345 1.2521205406126479 0.34478191870902464 0.12146259022161006 0.2499064217854827 14.476356897284047 0.01955642551077326 0.03416272486894775 8.105457305790608e-08 7.091222477449804 0.17058410169641336 NGQIDKEAVQK ddPTM_A549_PD325901_60min_R1 2 NGQIDKEAVQK 11 1 Q01813;Q01813-2;Q5VSR5 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 ; 92.925 0.00029507 9641900.0 4623.1 5429.200000000001 4984.0 5959.6 7852.5 6949.6 6079.1 6495.9 6189.9 5693.8 6073.1 False True 5092.433708653656 5886.737737779059 5322.2442112267045 6327.7109567663765 7300.96748965436 6893.004761732538 6310.443477111158 6366.334178565035 5929.760028957086 5334.292496290013 5326.14720055282 0.9561195958168587 1.105252542995442 0.9992672021295786 1.1880465782300573 1.3707783909721019 1.2941821737516168 1.184804557496303 1.1952982031559791 1.1133301062992804 1.001529303534147 1.0 12.37887658601815 -9.74320839614461 0.9458737612908139 1.017499120184702 1.165098717586536 0.21990200176928754 0.11208398763011232 0.5799246225321087 1.0762601088387593 0.04012583393966539 0.02445950894447859 1.8063071617897293e-10 9.74320839614461 0.14759959740183404 NGQLSTINGVAEQDELS(ph)LQEGDLNGQK ddPTM_A549_PD325901_60min_R1 2 NGQLSTINGVAEQDELSLQEGDLNGQK 27 0 Q02952 Q02952 AKAP12 A-kinase anchor protein 12 1 NGQLSTINGVAEQDELS(1)LQEGDLNGQK;NGQLSTINGVAEQDELS(1)LQEGDLNGQK 208.62 1.7082999999999994e-81 56781000.0 8380.2 7668.4 8933.4 9448.199999999999 9786.7 9046.1 9334.2 9316.9 9249.3 8908.9 8629.4 True False 9230.951734822827 8314.642980252136 9539.674244898202 10031.793855580927 9099.315954282125 8972.431560824896 9689.418088870232 9131.067120533346 8860.584086307168 8346.390533597618 7568.038506273646 1.2197284312402326 1.0986523090969451 1.260521367193116 1.3255474119568647 1.2023347855245585 1.1855689626033292 1.2803077152472249 1.206530214264106 1.1707900374663853 1.1028472604465138 1.0 12.885703713808304 -10.093033831335205 0.5954994393948331 0.9955225137856945 1.225457738187415 0.5020892545183642 0.0620697622572353 0.3706350910227381 0.25040545436754114 0.0408919486159628 0.013563735992635736 8.071721494701234e-11 10.093033831335205 0.22993522440172054 NGS(ph)EADIDEGLYSR ddPTM_A549_MK2206_60min_R1 2 NGSEADIDEGLYSR 14 0 P22314;Q5JRR9;P22314-2;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 NGS(1)EADIDEGLYSR;NGS(0.999)EADIDEGLY(0.001)SR 193.8 2.5337e-27 79311000.0 2358.0 3337.8999999999996 2956.1 2682.5 3859.7000000000003 3141.1 2619.8 2229.44 4212.6 3812.8 3916.6 True False 2755.97275243497 3507.7848526763746 3375.319430542567 3339.712620422 3291.9432429136727 3473.4891171065706 3095.7837487595248 2545.46994737365 3258.4528261398773 2951.485831895396 2944.0001273390467 0.9361320085695695 1.1915029554862515 1.1465079091533092 1.1344132051518017 1.1181871944717328 1.1798535892884305 1.0515569343937727 0.8646297001605056 1.1068113740487677 1.0025426984485613 1.0 11.523562018458986 -7.9241328540600255 8.681721422040196 1.0341606623844253 1.1228776353590402 0.27690764579028304 0.08513847513018845 0.36067411923757964 37.43807418350083 0.013385234029658754 0.018510616324603737 1.1908776535637236e-08 7.9241328540600255 0.0887169729746149 NGS(ph)EADIDEGLYSR ddPTM_A549_PD325901_60min_R1 2 NGSEADIDEGLYSR 14 0 P22314;Q5JRR9;P22314-2;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 NGS(1)EADIDEGLYSR;NGS(1)EADIDEGLYSR 222.09 7.366299999999999e-47 83076000.0 4941.9 4912.0 5293.7 5240.0 6562.9 5376.7 6497.200000000001 6618.5 7933.9 7567.2 7886.5 True False 5443.598049965501 5325.951478665496 5652.9623156040925 5563.662899096552 6101.944544775878 5332.913937839205 6744.454501404261 6486.488825387192 7600.465773880455 7089.405700573567 6916.5104966425415 0.7870439945992952 0.7700344677060571 0.8173142104458876 0.8044031599167387 0.8822287695128814 0.771041111038282 0.9751238727503122 0.937826788311231 1.0988873330807383 1.0249974613665307 1.0 12.755828640599237 -8.032633416330112 1.477120761169979 1.0445309655468058 0.8042748293106338 0.8084816777133018 0.04843458858891941 0.11752440350319829 0.5109086438333441 0.009145011779728554 0.012962555521065264 9.27612481522257e-09 8.032633416330112 -0.24025613623617204 NGS(ph)EEDDDEKPGKR ddPTM_A549_MK2206_60min_R1 5 NGSEEDDDEKPGKR 14 2 Q6ZU65-2;Q6ZU65;H7C4P8 Q6ZU65-2 UBN2 Ubinuclein-2 1 NGS(1)EEDDDEKPGKR;NGS(1)EEDDDEKPGKR;NGS(1)EEDDDEKPGKR;NGS(1)EEDDDEKPGKR;NGS(1)EEDDDEKPGKR 90.79299999999999 1.3874000000000001e-05 26694800.0 4727.17 6028.18 4788.7 4798.19 6667.45 5888.58 4720.43 6202.57 7408.11 7377.780000000001 8030.1 True False 5525.000727789658 6334.988613561428 5467.8096671422445 5973.746765398936 5686.676937317605 6511.705627076953 5578.071028764386 7081.803292073969 5730.184913320766 5711.134373909254 6036.004550514551 0.9153407161229972 1.0495334389735325 0.9058657297857953 0.989685596723033 0.9421260189130959 1.0788105894522313 0.9241330058786772 1.1732600982665373 0.9493340943277263 0.9461779437231201 1.0 12.559378178167886 NGS(ph)EEDDDEKPGKR ddPTM_A549_PD325901_60min_R1 2 NGSEEDDDEKPGKR 14 2 Q6ZU65-2;Q6ZU65;H7C4P8 Q6ZU65-2 UBN2 Ubinuclein-2 1 NGS(1)EEDDDEKPGKR;NGS(1)EEDDDEKPGKR 117.3 6.8588e-07 25679000.0 2427.8 2854.6 3175.5 2678.2 3960.7 2752.0 2725.4 2647.7 3310.7 2883.7 3739.1 True False 2674.268468748103 3095.167160219571 3391.0085258327463 2843.6263313664867 3682.51409567323 2729.5886244226917 2829.116588396103 2594.8895464195307 3171.562792269375 2701.6226898646783 3279.214404107795 0.8155210788895382 0.9438745927507295 1.034091739041189 0.8671669433399484 1.122986679693841 0.8323910205454697 0.8627421814359363 0.791314390168869 0.9671715238553579 0.8238627783777782 1.0 11.679134516869045 -8.980598340527546 24.02530593390521 0.9855169831049316 0.9135001640951165 0.0 0.10510707595652004 137.84873091697904 170703.15578702785 0.016240287818285532 0.016542413641857497 1.045686881000107e-09 8.980598340527546 -0.07201681900981516 NGS(ph)GVALER ddPTM_A549_MK2206_60min_R1 2 NGSGVALER 9 0 Q7L9B9;H7C4A5 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 NGS(1)GVALER;NGS(1)GVALER 107.09 0.00050007 19112300.0 1970.1399999999999 2258.7 2205.8999999999996 2060.5299999999997 2930.2 2179.23 2040.7 2171.5 2781.1 2702.8 2811.1 True False 2302.6514667015394 2373.658182312272 2518.7297898697084 2565.3599425007073 2499.1714616124677 2409.8346721442003 2411.4687747513417 2479.3167749398444 2151.185290504108 2092.2356028238773 2113.026287586885 1.0897410411922561 1.1233453157949274 1.1920011618720299 1.2140691091119344 1.1827450875997232 1.1404660161120268 1.1412393631436 1.1733487602614117 1.0180589343073443 0.9901607069987043 1.0 11.045095000224258 -8.779914015191595 8.233096691592584 1.0083752138414666 1.1588635239511453 0.8108215229073176 0.03317381129238879 0.054702256550352255 18.64674465083847 0.006055633291058304 0.006523222219128238 1.6599155171608466e-09 8.779914015191595 0.15048831010967878 NGS(ph)GVALER ddPTM_A549_PD325901_60min_R1 2 NGSGVALER 9 0 Q7L9B9;H7C4A5 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 NGS(1)GVALER;NGS(1)GVALER 94.12200000000001 0.00095712 22287000.0 2732.2 2813.54 2849.9 2963.9 3244.8999999999996 3030.5 3404.4 3558.8 3263.2 3311.7 2687.2 True False 3009.5709326606657 3050.6468899194874 3043.3113518408877 3146.973371494711 3016.989418297284 3005.8206127590715 3533.956304959163 3487.8169421754087 3126.0590520836763 3102.5986968217435 2356.691435564296 1.2770322356350572 1.2944617372825593 1.291349094715993 1.3353353451387184 1.2801800748153027 1.2754408860654876 1.4995413704267897 1.4799633458761525 1.32646090400679 1.316506119554359 1.0 11.20254716182341 -10.431943898229978 0.8630891039185259 1.0076180197280202 1.3396188662451458 0.0853378459898364 0.11731829444611797 0.25377646690803124 0.3522082061111189 0.049914899014132555 0.01616774422230924 3.698759569372807e-11 10.431943898229978 0.3320008465171256 NGS(ph)LDSPGKQDTEEDEEEDEKDKGK ddPTM_A549_MK2206_60min_R1 1 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGS(0.371)LDS(0.291)PGKQDT(0.339)EEDEEEDEKDKGK 80.293 1.0625e-06 76171000.0 5347.3 5603.7 5428.3 5647.5 7315.0 6621.6 5695.8 6235.3 8132.9 7703.2 8091.9 True False 6249.793511066805 5888.904394662094 6198.1145647353615 7031.137753525904 6238.973190121904 7322.293316937648 6730.653132370604 7119.172869805389 6290.811135572565 5963.041769895252 6082.457904921314 1.0275111819532856 0.9681784052952317 1.0190147900112008 1.1559698173721866 1.025732243058181 1.2038378943836476 1.106567975904089 1.1704434261756698 1.0342547756035718 0.9803671251173901 1.0 12.570438715350425 -4.199776443585502 16.138847046426896 1.0485014369886458 1.0610296709119762 0.0 0.07942884718735721 0.0 0.0 0.010793530394971024 0.0 6.312822182195597e-05 4.199776443585502 0.012528233923330356 NGS(ph)LDSPGKQDTEEDEEEDEKDKGK ddPTM_A549_PD325901_60min_R1 1 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGS(0.579)LDS(0.421)PGKQDTEEDEEEDEKDKGK 95.835 3.2045000000000003e-09 75042000.0 4671.3 4836.6 5834.4 4526.4 6539.5 6843.6 5818.8 6501.3 7147.7 5634.1 6229.5 True False 5145.526937170693 5244.197256049176 6230.357469097326 4805.985447799741 6080.188080050263 6787.86799058835 6040.237618169537 6371.626471328815 6847.307025796304 5278.361964478478 5463.310992054101 0.9418330650871611 0.9598935999939219 1.140399563224357 0.8796836670637309 1.1129126804044938 1.242445835585911 1.1056001803584905 1.1662573264812817 1.2533255082412664 0.9661470804344444 1.0 12.415559833622225 -6.922450144733086 9.822105887366789 1.1345880629420027 0.9906731461111106 0.3040805857938821 0.10096572852676379 0.365837368611627 43.47000115347277 0.015819299698244835 0.02992659551913185 1.1955007564949442e-07 6.922450144733086 -0.14391491683089208 NGS(ph)PAGGDAK ddPTM_A549_MK2206_60min_R1 1 NGSPAGGDAK 10 0 Q92604 Q92604 LPGAT1 Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 1 NGS(1)PAGGDAK 51.875 0.024302 4738500.0 1592.7 1478.0 1550.2 1235.0 762.44 719.15 637.05 602.2 905.18 2073.7 2244.7 True False 1861.508822223569 1553.2238869515816 1770.041670182702 1537.5750554412564 650.2860859981605 795.2499756668647 752.7937388912349 687.5636941601535 700.1581752754336 1605.2497297528007 1687.2790394316382 1.103260799618906 0.920549506425912 1.0490509446374339 0.9112749103783037 0.3854051824274484 0.47132095941566693 0.44615841321943656 0.40749850978517466 0.4149628833837008 0.9513836729066052 1.0 10.720482868550944 -6.578390677938821 8.188088417243625 0.6333107458852831 1.0084970046248944 0.47265777841521917 0.20790034205602678 0.24640478251567188 32.47429749215613 0.0381145453135006 0.07961070526204884 2.6400327966258455e-07 6.578390677938821 0.3751862587396113 NGS(ph)PEIK ddPTM_A549_MK2206_60min_R1 2 NGSPEIK 7 0 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 NGS(1)PEIK;NGS(1)PEIK 98.04 0.011565 44789000.0 12568.599999999999 17082.7 14984.7 15952.300000000001 22819.0 16319.5 16703.4 17600.0 23165.0 19734.3 20022.2 True False 14689.87240723247 17952.136463888895 17109.75578324521 19860.614216125952 19462.35532814652 18046.41865799264 19738.191567688315 20094.853897739456 17918.16448690362 15276.30792393342 15050.135155391876 0.9760624908388056 1.192822275583176 1.1368506399834857 1.3196302897659142 1.2931681428238815 1.1990868169398008 1.3114959675705564 1.335194248441035 1.1905650216359847 1.0150279559755657 1.0 13.877488822490445 -10.198774939647157 0.8871356501914408 1.0130530962068183 1.2230453804254031 0.3961142001680026 0.09868077422735635 0.4079743431357433 0.6315169849724012 0.04680725645213806 0.019466910461575324 6.327396651664076e-11 10.198774939647157 0.20999228421858485 NGS(ph)PEIK ddPTM_A549_PD325901_60min_R1 2 NGSPEIK 7 0 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 NGS(1)PEIK;NGS(1)PEIK 103.26 0.01043 60898000.0 22689.0 21928.8 23805.1 23929.0 28884.0 25972.0 26136.0 25432.0 25973.0 24845.0 26272.0 True False 24992.370577240992 23776.816935130297 25420.657237695195 25407.039983297997 26855.28748439051 25760.49264298915 27130.619782167967 24924.738808981965 24881.44513354051 23276.282459925766 23040.7105519296 1.0847048540848037 1.0319480764945008 1.1032931115731708 1.102702103133283 1.1655581291151391 1.118042457281413 1.1775079471190983 1.0817695380012742 1.0798905301753705 1.010224159861096 1.0 14.49189758825408 -9.901668980249239 0.7467047135215548 1.0063194996152278 1.1087632868249058 0.5141972647975386 0.03783669063749972 0.37898194328217166 0.4342330777116805 0.01855700872438843 0.008712441869529172 1.2540966846770826e-10 9.901668980249239 0.10244378720967795 NGS(ph)PNKQPSSEPEWTPEPR ddPTM_A549_MK2206_60min_R1 2 NGSPNKQPSSEPEWTPEPR 19 1 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 NGS(0.999)PNKQPS(0.001)SEPEWTPEPR;NGS(0.9)PNKQPS(0.041)S(0.059)EPEWTPEPR 196.08 5.6013e-55 36103000.0 6955.700000000001 8805.5 6258.5 8288.6 11913.8 9739.2 8257.6 9986.3 14324.7 12015.099999999999 13779.0 True False 8129.652109462224 9253.662338668579 7146.049408359206 10319.307372089388 10161.295802115432 10769.795679642266 9757.899031894294 11401.88860676111 11080.17832184538 9300.880565150646 10357.29401894621 0.7849204719486534 0.8934440136334066 0.6899533213296065 0.9963323772804621 0.9810763104270048 1.0398271652751658 0.9421282251951654 1.1008559364930706 1.069794707148105 0.8980029482736411 1.0 13.338359508502846 -6.386303242622176 5.905710884513178 1.0279793207623331 0.8008452005420872 0.6311551128295239 0.0712429649768801 0.08307553616681124 3.6590430170384343 0.008178614572012114 0.01921684555084918 4.108627393280748e-07 6.386303242622176 -0.22713412022024593 NGS(ph)PPPGAPSSR ddPTM_A549_MK2206_60min_R1 1 NGSPPPGAPSSR 12 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 NGS(1)PPPGAPSSR 94.023 0.00026288 20393000.0 1177.7 1860.6 1910.3 1599.1 2168.2 1658.9 1626.3 1716.9 2497.9 1842.8 2313.0 True False 1376.4669679994329 1955.2965927348528 2181.209264965822 1990.8795717863275 1849.260652197173 1834.4436969113012 1921.7776588318259 1960.2758327857307 1932.129638326639 1426.5102001198159 1738.6182644475355 0.791701661110077 1.124626741084058 1.2545647941061546 1.145092981304295 1.0636381142497633 1.055115855172622 1.1053476764449448 1.1274906475278685 1.111301818136941 0.8204849962122679 1.0 10.763725490196936 -10.74411148491299 0.9685110157179178 0.9993219039958391 1.0949921329951005 0.16857292181137684 0.12020599596267828 1.1085343780812777 1.82688068143572 0.07371346512954365 0.018391018113748343 1.8025549592985564e-11 10.74411148491299 0.09567022899926136 NGS(ph)PPPGAPSSR ddPTM_A549_PD325901_60min_R1 2 NGSPPPGAPSSR 12 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 NGS(1)PPPGAPSSR;NGS(1)PPPGAPSSR 93.228 0.000265 53030000.0 5213.2 5338.2 5319.2 5600.4 6854.099999999999 6234.1 6622.5 6516.700000000001 6319.3 6136.9 6543.700000000001 True False 5742.440226245002 5788.068848414529 5680.192898948048 5946.323988568764 6372.691661361339 6183.331556509269 6874.522861471054 6386.719306247747 6053.721796957709 5749.415086670093 5738.866383932005 1.0006227436002 1.0085735511494542 0.9897761193485469 1.036149579160374 1.1104443343033659 1.0774482524670206 1.197888642383925 1.1128886576153152 1.0548636946675136 1.0018381161073244 1.0 12.486550069681883 -6.44547726611634 5.355412724667503 1.0558203146656457 1.0014992718175506 0.2274285837065485 0.05489114198776232 0.38005852830925885 19.15027406603477 0.009220221386131842 0.02163086007165399 3.5852771552869657e-07 6.44547726611634 -0.054321042848095136 NGS(ph)RLDIVHENLK ddPTM_A549_MK2206_60min_R1 2 NGSRLDIVHENLK 13 1 Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6;F8W1S5 Q00537 CDK17 Cyclin-dependent kinase 17 1 NGS(1)RLDIVHENLK;NGS(1)RLDIVHENLK 97.417 6.889899999999999e-05 9734200.0 1160.01 1225.1100000000001 1482.95 1359.47 1727.4099999999999 1448.69 1420.6599999999999 999.5 1915.05 2187.18 2083.75 True False 1355.7913284784102 1287.4628661321053 1693.2546089520306 1692.5402110289278 1473.3102772861905 1601.9894142374064 1678.7755326791 1141.1821858403744 1481.294232706445 1693.0945189375188 1566.2973664256597 0.8656027632686181 0.8219785678821234 1.0810556445077166 1.080599538318422 0.9406325445393114 1.0227875297353 1.0718115018670555 0.7285859060368519 0.9457298878608252 1.0809534352989525 1.0 10.613142423434525 -5.736663855730972 24.996567673263115 0.9773995595754927 0.8437905384404495 0.241091258354575 0.09946094339489815 252.67463418871023 254924.93172344525 0.012670671569939807 0.049030025130598835 1.8337331841592913e-06 5.736663855730972 -0.13360902113504325 NGS(ph)RLDIVHENLK ddPTM_A549_PD325901_60min_R1 1 NGSRLDIVHENLK 13 1 Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6;F8W1S5 Q00537 CDK17 Cyclin-dependent kinase 17 1 NGS(1)RLDIVHENLK 95.57 7.1292e-05 8292000.0 811.96 1041.6 1161.4 1255.5 1198.6 1399.1 1457.7 1467.5 1295.3 1388.2 1434.8 True False 894.3895814666408 1129.3792874955177 1240.2195880655486 1333.0493835526186 1114.4144709455227 1387.7061934701271 1513.1735711840477 1438.2295612685202 1240.863045527086 1300.5488150883061 1258.3286959465818 0.710775796775288 0.8975232712514265 0.985608602951385 1.05938089773104 0.8856306579793929 1.1028169332387519 1.2025264750445495 1.1429681019764135 0.9861199617589923 1.0335525362154792 1.0 10.297293111546438 -5.18615211543134 1.3149696946366665 1.0235855178780113 0.5320834958784748 0.5921561706323012 0.08266518190413367 0.9718212525885179 1.2641919305647333 0.013024592235054451 0.6669956059730457 6.514001954972162e-06 5.18615211543134 -0.4915020219995365 NGSGLT(ph)PR ddPTM_A549_MK2206_60min_R1 1 NGSGLTPR 8 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 NGS(0.006)GLT(0.994)PR 52.705 0.028154000000000002 5968300.0 2411.1 2916.5 2392.1 2140.7 3179.1 2555.2 2241.9 2848.3 3964.1 2993.4 3326.7 True False 2818.0347342646137 3064.9373926213057 2731.3357497381257 2665.171596099675 2711.458601328304 2825.5895679955147 2649.224210376358 3252.055247552916 3066.2376793669173 2317.1888609934117 2500.5885777508056 1.1269485749628354 1.2256863923525207 1.0922771438854084 1.0658177118032373 1.0843281559604536 1.1299697971655283 1.0594402589646494 1.3005159171278105 1.2262063846284117 0.9266573804306681 1.0 11.288051994853921 -10.993844311061583 1.3157475619634498 1.001272744307593 1.1524239019349654 0.4341203927621068 0.07691400718438077 0.4069427392623249 1.2708075690689504 0.05353554291556573 0.012690442336447016 1.0142749249749185e-11 10.993844311061583 0.1511511576273723 NGSLDS(ph)PGKQDT(ph)EEDEEEDEKDKGK ddPTM_A549_MK2206_60min_R1 2 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 2 NGS(0.007)LDS(0.993)PGKQDT(1)EEDEEEDEKDKGK;NGS(0.003)LDS(0.997)PGKQDT(1)EEDEEEDEKDKGK 172.03 4.1845999999999998e-47 157260000.0 7636.9 10510.7 11229.0 12268.8 17470.7 13155.2 11454.5 11676.1 17948.6 16248.099999999999 15061.6 True False 8925.822015721213 11045.64973517049 12821.441049207566 15274.656550767357 14900.783173296342 14547.274532284973 13535.634380550417 13331.22293155657 13883.270758024533 12577.642925204462 11321.389040987031 0.7884034356037847 0.975644392678471 1.1324971699841662 1.3491857311384883 1.316162099840467 1.2849372528069842 1.195580712891953 1.1775253799064143 1.2262868723760552 1.1109628756391456 1.0 13.466763355352082 -5.522317513720011 2.4264464155597247 1.1630886318718812 0.7859788768980361 0.6113871006166998 0.09925334339244114 0.24973594409552707 2.4912191655177693 0.018402442054803125 0.15366410685907053 3.0038793563476564e-06 5.522317513720011 -0.377109754973845 NGSLDS(ph)PGKQDTEEDEEEDEKDK ddPTM_A549_MK2206_60min_R1 3 NGSLDSPGKQDTEEDEEEDEKDK 23 2 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGSLDS(1)PGKQDTEEDEEEDEKDK;NGS(0.001)LDS(0.995)PGKQDT(0.004)EEDEEEDEKDK;NGS(0.012)LDS(0.983)PGKQDT(0.005)EEDEEEDEKDK 149.29 4.206699999999999e-28 159555100.0 8458.92 9848.76 9675.070000000002 10366.900000000001 14968.2 12876.5 10606.8 13158.4 14425.8 12489.8 11558.9 True False 9886.578895261751 10350.019816544833 11047.140408937268 12906.790965387825 12766.39760825464 14239.082683271066 12533.918263356943 15023.643495909933 11158.379333268915 9668.345505457175 8688.506120589105 1.1378916879431757 1.1912312281185424 1.2714660328959106 1.4855017406044837 1.4693432255289753 1.6388413020195487 1.4425861119733099 1.7291400025958994 1.284269030648084 1.1127742066666846 1.0 13.084892429746871 -9.755508732235892 1.0968836431032503 1.0501537454163008 1.4151387421711572 0.3754577678976446 0.17299835231320437 0.3162424256132467 0.7792071659277756 0.05596245982198667 0.0362053774000378 1.7558655891531353e-10 9.755508732235892 0.3649849967548564 NGSLDS(ph)PGKQDTEEDEEEDEKDKGK ddPTM_A549_PD325901_60min_R1 2 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGS(0.031)LDS(0.964)PGKQDT(0.005)EEDEEEDEKDKGK;NGS(0.201)LDS(0.723)PGKQDT(0.076)EEDEEEDEKDKGK 91.76700000000001 6.1685e-09 159527000.0 12656.7 14051.900000000001 14100.2 14736.9 17332.8 14189.199999999999 14098.099999999999 15729.1 14366.3 16687.7 14697.800000000001 True False 13941.598866629909 15236.102928147335 15057.124363390598 15647.164843071758 16115.40392291387 14073.647859614272 14634.610910276338 15415.370761259752 13762.534371154 15634.035774059312 12890.063777030717 1.0815771828431882 1.1820036883988978 1.1681186861326045 1.2138935162566087 1.2502190991196263 1.091821429517876 1.1353404578458561 1.1959111318540543 1.0676855141460178 1.2128749744371459 1.0 13.653971781385422 -9.094296843559666 0.8442350422383591 1.0128857898225139 1.17204986004388 0.0 0.07826612027771715 0.23724278814950306 0.3574427737730276 0.013655858241598085 0.011755590292827894 8.048281470360521e-10 9.094296843559666 0.15916407022136614 NGSLDSPGKQDT(ph)EEDEEEDEKDKGK ddPTM_A549_MK2206_60min_R1 2 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGSLDSPGKQDT(1)EEDEEEDEKDKGK;NGS(0.24)LDS(0.204)PGKQDT(0.556)EEDEEEDEKDKGK 147.54 1.4452e-32 77025400.0 2885.9 3659.7 3822.2 3360.1 5025.5 4136.5 3493.4 3531.2000000000003 5727.3 4752.4 4554.9 True False 3372.969366519118 3845.9630981574423 4364.2454339906635 4183.324650840619 4286.255607239595 4574.221684413526 4128.105560697964 4031.758413846455 4430.075694618742 3678.8295393148546 3423.792621155241 0.98515586069025 1.1233049205123162 1.2746815934541325 1.221839379228845 1.2519028111560522 1.336010147387406 1.2057113316942303 1.1775708578068251 1.2939088854990188 1.074489592793608 1.0 11.741379605124417 -10.909052477387409 1.120202065937505 0.998028644819008 1.2183882119869627 0.32456221872166013 0.09220700638750344 0.3929786983937947 0.8628885560879768 0.06829970348765889 0.015637316005948608 1.2329558416728967e-11 10.909052477387409 0.22035956716795468 NGSMGS(ph)PVNQQPK ddPTM_A549_MK2206_60min_R1 6 NGSMGSPVNQQPK 13 0 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRW1;A0A0A0MRV9;Q5T586;A0A0A0MRW2;Q8IW50-3;Q8IW50-2;Q8IW50-7;Q8IW50-5;Q8IW50-6 Q5T593 FAM219A Protein FAM219A 1 NGS(0.053)MGS(0.947)PVNQQPK;NGS(0.009)MGS(0.991)PVNQQPK;NGS(0.031)MGS(0.969)PVNQQPK;NGS(0.019)MGS(0.981)PVNQQPK;NGS(0.011)MGS(0.989)PVNQQPK;NGS(0.002)MGS(0.998)PVNQQPK 99.941 0.00015566 18314800.0 4377.959999999999 5707.85 5359.85 5156.33 7313.37 5654.9400000000005 4846.1900000000005 5572.3 8450.25 8029.650000000001 8042.219999999999 True False 5116.852617154456 5998.355184801479 6119.957325460431 6419.631081476452 6237.582960962661 6253.341997354627 5726.679992900574 6362.190589453043 6536.281867276379 6215.746488165882 6045.114820019561 0.8464442396046827 0.9922648888217591 1.0123806590394304 1.061953539776715 1.031838624521358 1.034445528916255 0.9473236097907637 1.052451571041037 1.0812502428622568 1.0282263733984407 1.0 12.561554026733614 -5.1204304614356175 1.7119508534869128 1.033955685248487 0.7288714239607045 0.7054932632668867 0.033550000820251696 0.6462005054349873 1.3782050240566355 0.005544127236338585 0.3587911897226678 7.578260650956439e-06 5.1204304614356175 -0.30508426128778254 NGSMGS(ph)PVNQQPK ddPTM_A549_PD325901_60min_R1 3 NGSMGSPVNQQPK 13 0 Q5T593;A0A0A0MRW0;A0A0A0MRW3;Q8IW50-4;Q8IW50;A0A0A0MRW1;A0A0A0MRV9;Q5T586;A0A0A0MRW2;Q8IW50-3;Q8IW50-2;Q8IW50-7;Q8IW50-5;Q8IW50-6 Q5T593 FAM219A Protein FAM219A 1 NGSMGS(1)PVNQQPK;NGSMGS(1)PVNQQPK;NGS(0.186)MGS(0.814)PVNQQPK 161.21 4.5288000000000005e-19 20721800.0 4707.3099999999995 4329.27 4855.08 5127.339999999999 6198.349999999999 5408.05 5468.68 5605.099999999999 6106.45 5405.3099999999995 5972.639999999999 True False 5185.192645861534 4694.112776474386 5184.574924767764 5444.044146765976 5762.999279146651 5364.008633833265 5676.79360997652 5493.301883384116 5849.817142251891 5064.017804124025 5238.043143684405 0.9899102591610776 0.8961577153357654 0.9897923294157842 1.0393278553518501 1.1002198953048326 1.024048196376683 1.0837622856965439 1.0487316985938693 1.1167943794630848 0.9667766502133139 1.0 12.354812227306534 -6.148746044568504 2.891275880225768 1.0583439943276818 0.9429679428828953 0.42430075049352567 0.046524621447001084 0.16559432726554574 2.646976159663611 0.006581715069707372 0.020260548106451608 7.099928177342009e-07 6.148746044568504 -0.11537605144478646 NGSS(ph)SDSSVGEK ddPTM_A549_MK2206_60min_R1 1 NGSSSDSSVGEK 12 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 NGS(0.144)S(0.821)S(0.026)DS(0.007)S(0.002)VGEK 67.964 0.0014865 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NGSSS(ph)DSSVGEK ddPTM_A549_MK2206_60min_R1 2 NGSSSDSSVGEK 12 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 NGS(0.001)S(0.03)S(0.75)DS(0.151)S(0.068)VGEK;NGS(0.007)S(0.034)S(0.819)DS(0.054)S(0.086)VGEK 162.41 4.1023e-14 28167000.0 3572.6000000000004 2734.71 2578.5 2553.92 3432.16 3482.4 3647.2 4407.4 4851.9 7150.200000000001 7283.9 True False 4175.5675383160215 2873.8950581091735 2944.17007261392 3179.6305146498257 2927.2938105548583 3850.9052565699662 4309.849029878519 5032.162447096417 3752.9523968921953 5534.964853970432 5475.106604586858 0.7626458879938288 0.5249021189288847 0.5377374880970162 0.5807431241587222 0.5346551258202846 0.7033479956981675 0.787171710276449 0.9190985327811959 0.6854574107740842 1.0109328007117573 1.0 12.418671340044666 -7.6498162124801725 2.149454633477936 0.8523289855797197 0.5816565742056518 0.6341427889919447 0.10540630706529819 0.19698139748403634 1.8554564608626531 0.01997288443031259 0.03135802969189775 2.239668735406167e-08 7.6498162124801725 -0.27067241137406794 NGSSS(ph)DSSVGEK ddPTM_A549_PD325901_60min_R1 2 NGSSSDSSVGEK 12 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 NGS(0.117)S(0.299)S(0.582)DS(0.002)SVGEK;NGS(0.007)S(0.076)S(0.915)DS(0.001)SVGEK 216.83 7.5609e-32 58456000.0 13653.4 12673.7 14403.5 14549.3 16071.1 15687.4 13323.8 13847.8 16911.8 15251.8 16733.2 True False 15039.483116898165 13741.757177354011 15381.00812528167 15447.977217142263 14942.321378285156 15559.6470155409 13830.844500063109 13571.594765611053 16201.055858368696 14288.798745111524 14675.122480494381 1.0248284562454644 0.9363981251685658 1.0481008349828442 1.0526642784532212 1.0182076093842436 1.0602737412394476 0.9424687608874506 0.9248028276186385 1.1039809636957052 0.9736749225843706 1.0 13.841084923856801 -8.780358457198101 24.99911599485066 1.0491021070853117 1.0027115477363584 0.0 0.055437574651826936 393.75214957137325 520290.5414057808 0.010145105664877942 0.010809025242459734 1.6582176857223977e-09 8.780358457198101 -0.04639055934895331 NGSTAGNS(ph)PHCR ddPTM_A549_PD325901_60min_R1 2 NGSTAGNSPHCR 12 0 H7BZK3;A0A087WWX2;Q8TBM8 H7BZK3 DNAJB14 DnaJ homolog subfamily B member 14 1 NGS(0.021)T(0.017)AGNS(0.962)PHCR;NGSTAGNS(1)PHCR 78.69 0.0002971 5989500.0 0.0 142.04 263.71 186.82 218.54700000000003 175.85 107.37 177.92 0.0 171.26 343.94399999999996 True False 0.0 154.0102092894233 281.60694641705317 198.35944710099588 203.19701266621985 174.41793590288168 111.4560241051184 174.37124602446008 0.0 160.44661437258554 301.6410684406544 0.0 0.5105744058180978 0.9335829098896631 0.6576009298946691 0.6736384197173646 0.5782300692824827 0.369498837413933 0.5780752830703034 0.0 0.5319123659189405 1.0 8.236689054727766 -11.157898808019896 1.560512650657434 0.9987794603713911 0.432603191471774 0.031292394981274896 0.29871902246718895 0.38722415320047504 1.6975554474979768 0.22250289905590512 0.047769259442447996 6.951862793086522e-12 11.157898808019896 -0.566176268899617 NGSTAVAESVAS(ph)PQK ddPTM_A549_MK2206_60min_R1 4 NGSTAVAESVASPQK 15 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 NGSTAVAESVAS(1)PQK;NGSTAVAES(0.001)VAS(0.999)PQK;NGSTAVAES(0.013)VAS(0.987)PQK;NGSTAVAES(0.003)VAS(0.997)PQK 165.8 2.7479e-20 49763100.0 27931.5 34574.3 35247.5 32743.2 48926.0 37790.9 34850.1 37908.5 55466.6 49403.4 49533.9 True False 32645.654340389065 36333.98419122467 40246.125512685336 40765.28546989808 41729.05021188029 41789.907954430804 41181.91206299883 43282.14596491227 42903.50366195934 38243.137627848555 37233.265563907386 0.8767872988297489 0.975847367694913 1.0809184986368348 1.0948619427411843 1.1207464502477311 1.1223809494416324 1.106051576172226 1.162459035203951 1.152289572568367 1.0271228442804143 1.0 15.18430453364511 -5.518001078303829 2.079147766517224 1.0908865753329546 0.8650049305774679 0.6878141288341358 0.0462523483831658 0.25497709800266466 1.7216662419710511 0.008769817025753274 0.08813127354565176 3.0338836513966964e-06 5.518001078303829 -0.22588164475548678 NGSTAVAESVAS(ph)PQK ddPTM_A549_PD325901_60min_R1 4 NGSTAVAESVASPQK 15 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 NGSTAVAES(0.001)VAS(0.999)PQK;NGSTAVAES(0.001)VAS(0.999)PQK;NGSTAVAESVAS(1)PQK;NGSTAVAES(0.002)VAS(0.998)PQK 215.81 1.1233e-45 95217700.0 34361.5 33587.9 37899.1 38380.8 45725.8 44245.5 42330.899999999994 44540.5 44764.1 43597.4 47229.0 True False 37849.85418440066 36418.47020974529 40471.16083180215 40751.494846878835 42514.177553446345 43885.179317548755 43941.82556385727 43652.104786153715 42882.82054835098 40844.652723621155 41420.13240929824 0.9138033121280872 0.879245625047057 0.9770891225523206 0.9838571843321944 1.0264133666531328 1.0595132551458755 1.0608808569137491 1.0538861719417012 1.0353134587933956 0.9861062808783321 1.0 15.338044545032853 -6.061078370205331 1.5510610459580298 1.026593895821721 0.8922040441571496 0.7766180983802392 0.02667336841673351 0.15398840613174672 0.6709718687018073 0.00407082312434219 0.01963133121051913 8.688036359906037e-07 6.061078370205331 -0.1343898516645713 NGSVVSLQS(ph)PGSR ddPTM_A549_PD325901_60min_R1 2 NGSVVSLQSPGSR 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NGSVVSLQS(0.986)PGS(0.014)R;NGSVVSLQS(0.999)PGSR 109.16 6.6002e-05 25535000.0 23078.0 27231.0 21046.7 21860.8 23959.2 20171.9 19751.8 23298.0 20060.7 25249.0 32437.0 True False 25420.861570874327 29525.851937202817 22475.05562608851 23211.09196652099 22276.388446752862 20007.626734372137 20503.465557599684 22833.303113072565 19217.618541963428 23654.7738309787 28447.454635084516 0.8936075967767794 1.0379083934204891 0.7900550651856848 0.8159286046595723 0.7830714112214167 0.7033186972621636 0.7207486863275481 0.8026483706880416 0.6755479106472378 0.8315251446716446 1.0 14.796011951251002 -3.9642895460947427 24.397823268693845 0.8302265014269957 0.9013110704448517 0.0 0.10987283474885574 0.0 0.0 0.018236475993269306 0.0 0.00010857015401432222 3.9642895460947427 0.07108456901785598 NGT(ph)KSPEAATPVGK ddPTM_A549_MK2206_60min_R1 1 NGTKSPEAATPVGK 14 1 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 NGT(0.5)KS(0.5)PEAATPVGK 59.185 0.033285 2015100.0 256.35 613.27 293.03 515.06 809.76 758.76 679.32 617.44 746.0 710.68 909.85 True False 299.6156128442343 644.4828235120407 334.5860602590872 641.2497231219219 690.6453766825857 839.0514795758753 802.7436507394921 704.9640108306961 577.0321911172069 550.1368944113038 683.909134417462 0.43809271987489967 0.9423515363060565 0.4892258977416348 0.9376241533432998 1.0098496158716486 1.2268464293733405 1.1737577557335164 1.0307860728182379 0.843726398842018 0.8044005654053703 1.0 9.41766084817031 -6.381310311224509 6.38531748180881 0.9793200399529746 0.656522782433474 0.4989950914861203 0.16784664165609883 0.17228920802914466 8.340712903285919 0.02351752510330069 0.055094724811724304 4.1561354101992156e-07 6.381310311224509 -0.3227972575195006 NGT(ph)KSPEAATPVGK ddPTM_A549_PD325901_60min_R1 1 NGTKSPEAATPVGK 14 1 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 NGT(0.599)KS(0.4)PEAAT(0.002)PVGK 95.814 1.9247e-05 59798000.0 5542.1 5863.8 6665.7 6626.3 7810.1 7194.7 7999.0 8173.5 8088.2 7950.5 7392.5 True False 6104.7299121216165 6357.963005007888 7118.074486110319 7035.591501580819 7261.545519382297 7136.108748595178 8303.406322220757 8010.4731305132955 7748.28108147315 7448.504073159181 6483.269364918526 0.9416128759287381 0.9806723501897545 1.0979143523831931 1.0851919156175973 1.120043778942008 1.1006960141451498 1.280743688847965 1.235560745610631 1.1951194135785412 1.1488808583927757 1.0 12.662505799483961 -5.682571729891489 1.6197474332445292 1.1207184789344058 0.9246942388325456 0.44895748741882324 0.07482182275159971 0.5222203134593988 2.1712956671494 0.014143303906646837 0.12486441426880238 2.0769606577405157e-06 5.682571729891489 -0.19602424010186015 NGT(ph)LNK ddPTM_A549_MK2206_60min_R1 2 NGTLNK 6 0 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 NGT(1)LNK;NGT(1)LNK 75.378 0.048566000000000005 47214000.0 22758.0 23362.0 19365.3 15017.1 17470.9 12763.4 9597.5 12056.7 14760.3 32285.0 31474.0 True False 26598.994020320224 24551.02601283008 22111.590733833757 18696.29017414323 14900.95375356128 14114.014516340761 11341.241517947758 13765.774147095195 11417.115617355641 24991.796077093702 23658.137161790615 1.1243063576146342 1.037741299956682 0.9346294081659722 0.7902689060548231 0.6298447613038299 0.5965818196005638 0.4793801574650002 0.5818621328025686 0.48258726117265915 1.056372101750134 1.0 14.530048860105813 -6.094646302566309 1.6989111045087781 0.6966842573736091 1.0978062461684366 0.428533476984452 0.17749586045199162 0.3470221002425345 1.860678780084832 0.030912927459254558 0.13275709589535506 8.041807952278511e-07 6.094646302566309 0.4011219887948275 NGT(ph)LNK ddPTM_A549_PD325901_60min_R1 1 NGTLNK 6 0 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 NGT(1)LNK 69.812 0.054707000000000006 53066000.0 7911.2 9231.1 8205.6 8928.2 9729.1 7621.9 6051.2 7685.6 8253.2 9736.0 11427.0 True False 8714.339200082375 10009.037193548264 8762.481360281272 9479.674636586618 9045.76157957291 7559.829773432895 6281.481727343698 7532.304678763442 7906.346705276116 9121.26729844385 10021.551441721198 0.8695598930723735 0.9987512663836823 0.8743637560749096 0.9459288506090318 0.9026308583234 0.7543572287580352 0.6267973341126567 0.7516106385888861 0.7889344031464857 0.910165192633814 1.0 13.29081824976077 -4.864320327263836 13.72647931636783 0.8710319119558205 0.7640010048551583 0.0 0.11093016379618265 37795385.04611787 26862563.212755144 0.017890223879021266 125239347.89822972 1.3667203870464633e-05 4.864320327263836 -0.10703090710066221 NGT(ph)LNKHSGIDFK ddPTM_A549_MK2206_60min_R1 2 NGTLNKHSGIDFK 13 1 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 NGT(0.98)LNKHS(0.02)GIDFK;NGT(0.995)LNKHS(0.005)GIDFK 138.08 5.8916999999999994e-09 46125000.0 6807.7 9859.0 10401.5 9574.1 15655.0 9457.400000000001 8644.7 7229.6 17535.5 16554.4 16069.5 True False 7956.673327714821 10360.780988806255 11876.589106183314 11919.754929797688 13352.170238053099 10458.175790685957 10215.330091190728 8254.417939721434 13563.737248439385 12814.749542469874 12078.999654362158 0.6587195591848024 0.8577515758984733 0.9832427722517777 0.9868163979533717 1.1054036443515547 0.8658147272079055 0.845709941510066 0.6833693332163039 1.122918920155862 1.0609114917758946 1.0 13.560213359589124 -8.800541211656867 24.99997472537557 1.058045065485035 0.8868403558546238 0.30638967965222463 0.124704868401782 157.20704106503845 100510.53889942353 0.022986891090224185 0.024471602757818938 1.5829193510644464e-09 8.800541211656867 -0.17120470963041123 NGT(ph)LNKHSGIDFK ddPTM_A549_PD325901_60min_R1 4 NGTLNKHSGIDFK 13 1 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 NGT(0.995)LNKHS(0.005)GIDFK;NGT(0.689)LNKHS(0.311)GIDFK;NGT(0.698)LNKHS(0.302)GIDFK;NGT(1)LNKHSGIDFK 101.78 5.533600000000001e-05 65817000.0 9043.3 10746.300000000001 11896.800000000001 15688.300000000001 13257.4 18847.300000000003 15500.900000000001 18700.1 20656.2 15561.300000000001 17806.3 True False 9961.369158674408 11651.928415143138 12704.188389270026 16657.330660285585 12326.245959547121 18693.813837602396 16090.795231917959 18327.11183555534 19788.091747870458 14578.756862291926 15616.237983435742 0.6378853325135353 0.7461418318229028 0.8135242561457793 1.0666673162866842 0.7893223689739911 1.1970753684357949 1.0303887049483738 1.1735932722717881 1.2671484495087635 0.9335639529671436 1.0 13.930759323660888 -6.087801227089671 0.6646118945719316 1.1299614143225252 0.567687255938292 0.5916857005368727 0.12397331835147744 0.6772899076474365 0.3653875161808594 0.022089208942339376 0.23309070571134152 8.1695619974437e-07 6.087801227089671 -0.5622741583842332 NGTGGLFQGKT(ph)PLR ddPTM_A549_MK2206_60min_R1 2 NGTGGLFQGKTPLR 14 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 NGTGGLFQGKT(1)PLR;NGTGGLFQGKT(1)PLR 69.081 0.0011818 12543800.0 3515.6000000000004 4287.1 5944.4 5125.1 5595.4 4674.1 4690.2 4746.7 7715.9 6157.1 6030.6 True False 4108.9473318322225 4505.295078315377 6787.405305272905 6380.7497300744835 4772.32407218156 5168.710159583527 5542.348629067839 5419.559261159087 5968.2609697604 4766.206833708338 4533.03558390718 0.9064449761699376 0.9938803688878409 1.4973201025310738 1.407610774715052 1.0527876924513637 1.1402315432804162 1.2226572076212774 1.1955695385227447 1.3166146303700863 1.051438212977843 1.0 12.146261770952151 -11.014448562446768 1.309255363374432 1.00038476391136 1.2103307115618303 0.12187827817751995 0.16617554092768122 0.6573783163053044 2.0127634051730823 0.12132902921938012 0.02769788850623472 9.67278283670554e-12 11.014448562446768 0.20994594765047014 NGTGGLFQGKT(ph)PLR ddPTM_A549_PD325901_60min_R1 2 NGTGGLFQGKTPLR 14 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 NGTGGLFQGKT(1)PLR;NGTGGLFQGKT(1)PLR 70.414 0.00093604 23122000.0 5176.0 6067.0 6302.9 5421.0 8148.7 7384.7 7570.5 7917.1 8470.2 7185.8 7576.5 True False 5701.463709630192 6578.287382138349 6730.652696416692 5755.842858015729 7576.363423488886 7324.561451589483 7858.599520236552 7759.187229655197 8114.226949913936 6732.087361663702 6644.638531390625 0.8580547583883332 0.990014332767867 1.0129448975470552 0.8662386720999127 1.1402220583853588 1.1023265474843762 1.1826978221781257 1.1677365432294349 1.2211690540547353 1.0131608107589225 1.0 12.697975003628633 -6.7725096315837225 24.99939871177611 1.1194760261324062 0.9417655133322432 0.5825155832647644 0.07572424337394086 145.42243224632588 328400.5691077558 0.01334416194924932 0.025384851787613925 1.6884584132156643e-07 6.7725096315837225 -0.17771051280016292 NGTGQS(ph)SDSEDLPVLDNSSK ddPTM_A549_MK2206_60min_R1 1 NGTGQSSDSEDLPVLDNSSK 20 0 P29374 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 NGT(0.063)GQS(0.468)S(0.468)DS(0.001)EDLPVLDNSSK 117.26 3.308e-14 1406800.0 781.55 699.7 729.43 627.23 1301.2 934.13 709.54 803.12 1311.9 1233.7 794.61 True False 913.4565329370444 735.3117413396627 832.8741423567077 780.9013781574249 1109.7952036892175 1032.9790165746906 838.4542335654763 916.9647194518477 1014.7567446738126 955.0063131581384 597.2864068796606 1.5293442516281552 1.231087352516648 1.394430097125101 1.3074152854691676 1.8580620467942703 1.729453415776147 1.4037725016139626 1.5352177931559639 1.6989449834880683 1.5989085004416483 1.0 9.222279078889883 -10.88753778089888 1.101534148981963 0.9958159392432904 1.5289824352136672 0.0 0.24857543757010586 0.33792696514073295 0.7186972855766193 0.13980516963405726 0.03248601503423599 1.29557398579506e-11 10.88753778089888 0.5331664959703768 NGTGQS(ph)SDSEDLPVLDNSSK ddPTM_A549_PD325901_60min_R1 1 NGTGQSSDSEDLPVLDNSSK 20 0 P29374 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 NGT(0.003)GQS(0.497)S(0.497)DS(0.002)EDLPVLDNSSK 97.32 1.2895000000000001e-11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NGTGQSS(ph)DSEDLPVLDNSSK ddPTM_A549_MK2206_60min_R1 1 NGTGQSSDSEDLPVLDNSSK 20 0 P29374 P29374 ARID4A AT-rich interactive domain-containing protein 4A 1 NGT(0.004)GQS(0.143)S(0.844)DS(0.009)EDLPVLDNSSK 108.49 7.5706e-10 2104700.0 525.32 594.21 1023.8 758.36 950.38 779.26 847.33 659.17 975.35 1524.9 1091.4 True False 613.9811731590917 624.452750923883 1168.9902347652235 944.1582340440739 810.5803609607731 861.720775969076 1001.2788929828266 752.6093661234618 754.4347823138979 1180.4240309109548 820.3752588923645 0.7484150289808382 0.7611794043703759 1.4249457453696788 1.1508857974566857 0.9880604664445682 1.0503982983744957 1.2205132738092448 0.9173964694396106 0.9196215684667324 1.4388830210515036 1.0 9.680140173046025 NGTKS(ph)PEAATPVGK ddPTM_A549_MK2206_60min_R1 2 NGTKSPEAATPVGK 14 1 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 NGT(0.311)KS(0.631)PEAAT(0.059)PVGK;NGT(0.203)KS(0.796)PEAAT(0.001)PVGK 122.22 4.6631e-07 85713000.0 6828.8 10177.0 10416.5 11095.5 13847.4 9262.0 9029.2 8983.6 16151.400000000001 13486.4 14129.5 True False 7981.334491869354 10694.965830518433 11893.71633173663 13813.897998095923 11810.465803539864 10242.098692381984 10669.68876414211 10257.052811121144 12493.133688485872 10439.812873288418 10620.755195638318 0.7514846491468978 1.0069873218535903 1.1198559907134558 1.3006512007516142 1.1120175153260412 0.9643474973030318 1.0046073530179747 0.9657555062876756 1.1762942896580926 0.9829633280292339 1.0 13.374598733098859 -5.298120799544475 3.027409659234442 1.0817685330838909 0.7122607294798339 0.4524019261943035 0.09965051535044854 0.2350364918878995 3.2833686164809213 0.014706075324679296 0.19842200991155692 5.033605789497279e-06 5.298120799544475 -0.369507803604057 NGTKS(ph)PEAATPVGK ddPTM_A549_PD325901_60min_R1 1 NGTKSPEAATPVGK 14 1 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 NGT(0.326)KS(0.651)PEAAT(0.024)PVGK 92.47399999999999 1.7066e-05 58701000.0 5945.0 6063.3 7011.4 6705.7 7740.5 8117.9 8284.1 7271.8 7362.0 7394.8 8108.1 True False 6548.532023522313 6574.275570153202 7487.235766973293 7119.89585925034 7196.83398327534 8051.790513881168 8599.355958733464 7126.758244383254 7052.60074204463 6927.891065995534 7110.8551014806735 0.9209204701919366 0.9245407867732053 1.0529304366523018 1.0012714023335652 1.0120912155525097 1.1323238062050465 1.2093279691415515 1.0022364599862637 0.9918076857698994 0.974269756186279 1.0 12.79580734330953 -5.7503099496611485 24.452282002425523 1.024005549956125 0.9227305274175549 0.2807316824449221 0.06884749541467505 192.89034346132698 423784.59692245314 0.010225716807225567 0.03882774439654135 1.7770107306364303e-06 5.7503099496611485 -0.10127502253857001 NGTLILS(ph)PVDIK ddPTM_A549_MK2206_60min_R1 2 NGTLILSPVDIK 12 0 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 NGTLILS(1)PVDIK;NGTLILS(1)PVDIK 109.84 9.1819e-05 2574900.0 1267.58 1532.4299999999998 1614.63 1439.0700000000002 1979.08 1645.3600000000001 1431.2800000000002 1889.38 2359.7 1894.77 2052.48 True False 1481.5165146444103 1610.4241414622552 1843.6088130093513 1791.6422146023071 1687.9599536714238 1819.470903098426 1691.3250492115953 2157.205400983579 1825.2317176665867 1466.7401410250839 1542.7925704337556 0.9602823756325729 1.0438371122110635 1.194981651027151 1.161298186766992 1.094093908682004 1.1793360546109466 1.0962750804121904 1.398247205959179 1.1830700721830825 0.9507046955850392 1.0 10.591328388227668 -5.5287976736466815 4.969426033770945 1.1266597622979917 0.9761589365408612 0.19454226698543176 0.11076325555968623 0.22270124287451284 15.606309764421917 0.015661211929658157 0.07533414356447331 2.9593908476522873e-06 5.5287976736466815 -0.15050082575713053 NGTLILS(ph)PVDIK ddPTM_A549_PD325901_60min_R1 2 NGTLILSPVDIK 12 0 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 NGTLILS(1)PVDIK;NGTLILS(1)PVDIK 107.14 0.00013529 3775400.0 3083.3 3499.9 3592.8999999999996 3077.3 3478.2 4101.5 3578.6 3675.5 3351.8 3923.3 3373.8 True False 3396.3143461945083 3794.84885590012 3836.7357998628468 3267.377831944626 3233.9032311385904 4068.0987438479933 3714.7855812850567 3602.1892691260314 3210.935502198479 3675.5821684454313 2958.843988280302 1.1478517825363503 1.2825444230689935 1.296700946403322 1.1042751307221323 1.0929617255751813 1.3748946412725185 1.2554854517504022 1.2174312952605675 1.0851993261275983 1.2422358809738063 1.0 11.530817913850873 -8.930748285074012 1.932810276746255 1.0310432017759268 1.2255626934126083 0.08364666663482245 0.10306870607142338 0.18531669439666773 1.3741273742988158 0.01639785150282023 0.01669089464382002 1.1728749610896108e-09 8.930748285074012 0.19451949163668147 NGTLILS(ph)PVDIKK ddPTM_A549_MK2206_60min_R1 2 NGTLILSPVDIKK 13 1 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 NGTLILS(1)PVDIKK;NGTLILS(1)PVDIKK 122.31 3.1854e-06 30453000.0 4818.9 6542.7 6765.5 6323.799999999999 9689.8 6398.5 7331.7 7562.299999999999 10483.7 8883.9 8400.1 True False 5632.2125092064825 6875.695483868818 7724.949632061074 7873.1312838861695 8264.443256000439 7075.58502301945 8663.774986938022 8634.279183572453 8109.15868902877 6877.020819863491 6314.123339034039 0.892002294980212 1.0889390521346214 1.2234397741813623 1.2469080600966902 1.3088821380649127 1.1205965805701068 1.3721263462464202 1.3674549450428317 1.2842889271575968 1.0891489523731042 1.0 12.624366726952962 -5.36021505234685 2.637660686815309 1.1906497518619752 0.8634809925918491 0.40557538582059305 0.11419129707744352 0.39247960298401174 4.009572346271029 0.02014457867634934 0.2523883239465838 4.3629973344113356e-06 5.36021505234685 -0.3271687592701261 NGTLILS(ph)PVDIKK ddPTM_A549_PD325901_60min_R1 2 NGTLILSPVDIKK 13 1 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 NGTLILS(1)PVDIKK;NGTLILS(1)PVDIKK 112.3 1.4569e-05 67148000.0 12923.7 12493.2 13679.4 15391.7 20326.2 19524.2 17487.5 19119.1 19064.3 15607.400000000001 17900.3 True False 14235.704510074913 13546.045808889206 14607.766344914631 16342.410351913059 18898.557833583243 19365.20138842789 18152.996382027173 18737.754551856215 18263.093768889077 14621.946100424453 15698.676579350846 0.9068092101979957 0.8628782012559525 0.9305094140310441 1.0410056076579692 1.2038312744426714 1.2335562995099716 1.1563392805929005 1.1935881637629762 1.1633524441742638 0.9314126593102336 1.0 13.938355322559135 -6.311668221018603 2.853939208816934 1.1132592747307057 0.8891001817405328 0.5644419722807976 0.08629818006224033 0.16311095769421005 2.613397055194565 0.013025323369907721 0.035581926255164285 4.879010794716195e-07 6.311668221018603 -0.2241590929901729 NGTLNKHS(ph)GIDFK ddPTM_A549_PD325901_60min_R1 1 NGTLNKHSGIDFK 13 1 A0A0A0MTH3;Q13418-3;Q13418 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 NGT(0.174)LNKHS(0.826)GIDFK 120.63 4.3239e-06 40459000.0 3551.2 4694.2 6161.2 6718.4 6366.2 9324.7 7843.2 8783.6 9450.2 7010.2 7673.4 True False 3911.7152097447306 5089.796708296331 6579.336082305368 7133.380309406547 5919.060074197718 9248.76273479443 8141.677267963723 8608.404207399099 9053.040957955734 6567.574775631785 6729.620445690338 0.5812683258013163 0.7563274555188098 0.9776682259277769 1.059997419910179 0.879553330231023 1.3743364591560816 1.2098271118956894 1.2791812371694657 1.3452528312727234 0.9759205335031447 1.0 12.716309422995161 -5.54410536001948 0.7434568286841517 1.1846455606169382 0.35577832830217654 0.6374363801293526 0.14268108806058213 0.9998962880785575 0.49088452188723436 0.025857279164460716 0.6324636819680886 2.8568973748216784e-06 5.54410536001948 -0.8288672323147617 NGTLTFGDVDT(ph)SDEK ddPTM_A549_MK2206_60min_R1 1 NGTLTFGDVDTSDEK 15 0 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 NGTLT(0.001)FGDVDT(0.955)S(0.044)DEK 98.06200000000001 2.1579e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NGTSGSDS(ph)PGQAVEAEEIVK ddPTM_A549_MK2206_60min_R1 1 NGTSGSDSPGQAVEAEEIVK 20 0 Q05D32 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 NGT(0.002)S(0.01)GS(0.186)DS(0.801)PGQAVEAEEIVK 141.83 8.2705e-21 9637800.0 1124.9 1903.0 1412.8 1313.1 2382.9 2090.8 1781.6 1667.9 2442.5 1924.3 2425.2 True False 1314.755618835496 1999.8545716298104 1613.1562841143862 1634.8095589472996 2032.3785666085423 2312.047068239284 2105.293658596065 1904.3299327295256 1889.2776498710173 1489.5992935156073 1822.9559078850684 0.7212218425846794 1.0970394637520189 0.8849123981204325 0.8967905103332697 1.1148808140765396 1.2682956610407776 1.1548790892252327 1.0446385041418058 1.036381429577687 0.8171340223164201 1.0 10.832063951774275 -5.2546098499126 24.203264148637505 1.0375558139750751 0.7212216107900629 0.3393230977317895 0.12420135135357233 393.97309781147317 1396148.1833759893 0.015104373115717202 0.20113349609010328 5.564038803441511e-06 5.2546098499126 -0.31633420318501226 NGTSSTCQDS(ph)PEKTTLAAK ddPTM_A549_MK2206_60min_R1 2 NGTSSTCQDSPEKTTLAAK 19 1 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 1 NGTSSTCQDS(0.998)PEKT(0.001)TLAAK;NGTSST(0.001)CQDS(0.999)PEKTTLAAK 148.95 1.7617e-21 28172000.0 2614.1000000000004 3972.6000000000004 3645.3999999999996 3688.6000000000004 4698.200000000001 3571.5 4179.6 4327.200000000001 5326.0 5203.1 4840.200000000001 True False 3055.296171391118 4174.788371653487 4162.372535468986 4592.307165587548 4007.1010036679086 3949.433759430172 4938.979218381294 4940.593851494219 4119.669503874323 4027.7160962901125 3638.244757275814 0.839772026134606 1.147473204848213 1.1440606152582267 1.2622315077631285 1.101383021484316 1.0855327288061194 1.3575170302944166 1.3579608248219004 1.1323233533521209 1.107049240773433 1.0 11.829026885988569 -10.02626096836169 1.1427600746430824 1.01887922068087 1.1652890772255842 0.06501054074357449 0.13834490625920987 0.582163352493994 1.5286759427045271 0.045761524126977676 0.025551089792275827 9.413237833290944e-11 10.02626096836169 0.14640985654471428 NGTSSTCQDS(ph)PEKTTLAAK ddPTM_A549_PD325901_60min_R1 2 NGTSSTCQDSPEKTTLAAK 19 1 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 1 NGTSST(0.001)CQDS(0.999)PEKTTLAAK;NGTSSTCQDS(0.975)PEKT(0.024)T(0.001)LAAK 153.24 2.6525e-22 51266000.0 10671.599999999999 9475.6 12751.1 12745.3 14453.3 13430.7 14448.900000000001 14446.8 12195.599999999999 14601.400000000001 13864.7 True False 11754.972975983303 10274.142066621094 13616.466324593253 13532.548234323534 13438.15006917814 13321.324832134389 14998.76079624147 14158.647240704644 11683.061343341418 13679.46511210948 12159.429795574682 0.9667371886353933 0.8449526202585813 1.1198277019164868 1.112926219554192 1.105162848513574 1.0955550594142636 1.2335085648259705 1.1644170391820148 0.9608231257351694 1.1250087662077708 1.0 13.569787956161159 -4.000010501117651 9.251582260742506 1.0279474712305439 1.0413100555542218 0.0 0.11241850347983867 0.0 0.0 0.015708093752278583 0.0 9.99975820575364e-05 4.000010501117651 0.013362584323677984 NGVAAEVS(ph)PAKEENPR ddPTM_A549_MK2206_60min_R1 2 NGVAAEVSPAKEENPR 16 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 NGVAAEVS(1)PAKEENPR;NGVAAEVS(1)PAKEENPR 161.58 4.7128e-21 163367000.0 4350.8 6202.1 6556.7 6443.0 9474.1 7127.6 6867.5 7605.8 9052.5 8709.1 7816.2 True False 5085.1086731527 6517.760398689046 7486.538652359001 8021.535289237263 8080.472440264383 7881.837901082035 8115.235855640137 8683.94544178561 7002.123203872008 6741.708261267357 5875.221823854223 0.8655177328805608 1.1093641387676678 1.274256339047933 1.3653161582203939 1.375347634953379 1.3415387771540253 1.3812645886307038 1.4780625654894555 1.191805758795763 1.1474814846811532 1.0 12.520427607511294 -9.767619453154392 1.1162555628976183 1.0341399101285689 1.2769162256663928 0.15827522712503272 0.1629074746905435 0.42406400876674216 1.079803778915205 0.050315747878093404 0.032555246533162496 1.7075779843400036e-10 9.767619453154392 0.24277631553782397 NGVAAEVS(ph)PAKEENPR ddPTM_A549_PD325901_60min_R1 1 NGVAAEVSPAKEENPR 16 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 NGVAAEVS(1)PAKEENPR 166.21 9.8733e-22 124950000.0 7965.3 7881.1 8630.5 9930.0 11963.0 10083.0 9992.5 9891.4 11325.0 9966.8 10375.0 True False 8773.931392256065 8545.267955722858 9216.217629412527 10543.353547333745 11122.760150109538 10000.887391007996 10372.77005560581 9694.108267346817 10849.04963374836 9337.494547055268 9098.940772543758 0.9642805257873075 0.939149750431213 1.0128890669585031 1.1587451562657198 1.2224236236016282 1.09912655121197 1.139997535417074 1.0654106351146926 1.1923420434261527 1.0262177522059877 1.0 13.151482892485287 -6.043832677355634 4.370967903556916 1.107782340077534 0.9549838484493933 0.5047968963047189 0.06364900522895137 0.1604967277436392 6.718114326739018 0.011093743129010479 0.032608578462094695 9.039976940118149e-07 6.043832677355634 -0.15279849162814063 NGVAAEVS(ph)PAKEENPRR ddPTM_A549_MK2206_60min_R1 4 NGVAAEVSPAKEENPRR 17 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR 147.25 3.9942e-17 309735000.0 5932.8 7809.8 7669.300000000001 7298.300000000001 9617.8 8008.2 7558.5 7166.4 11505.599999999999 9878.2 10453.2 True False 6934.111596966158 8207.285461647129 8756.922062399815 9086.38382763314 8203.034360622623 8855.622408587067 8931.781611191267 8182.259146179553 8899.599970667748 7646.707759292147 7857.381946356671 0.8824964402018644 1.04453181959071 1.1144834401820374 1.156413661658173 1.0439907868327853 1.1270449201840396 1.1367376146621937 1.0413467490877826 1.1326418941355314 0.9731877375310475 1.0 12.939832976002341 -5.283225363201609 3.4360898959831516 1.0792524564160904 0.8622579964357239 0.49667382772137625 0.057161002320611755 0.18238065475969756 3.6777725039916294 0.008095379923534471 0.0996826961644923 5.209243239752415e-06 5.283225363201609 -0.21699445998036648 NGVAAEVS(ph)PAKEENPRR ddPTM_A549_PD325901_60min_R1 4 NGVAAEVSPAKEENPRR 17 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR 161.04 4.8351000000000007e-23 379745000.0 17212.4 17080.0 19716.8 19079.399999999998 20929.9 22589.3 20483.6 23370.0 23765.4 21182.5 22458.5 True False 18959.79017690083 18519.391542265206 21054.90061475014 20257.89120553871 19459.856028235194 22405.340230258542 21263.11460705602 22903.86701658965 22766.622884404696 19845.033334971937 19696.246876161353 0.9626092877546196 0.9402497673137662 1.0689803365651953 1.0285152969958518 0.9879981780583658 1.1375436331160147 1.0795515887237923 1.1628543834059333 1.1558863486809492 1.007554051274137 1.0 14.26563312958669 -7.244643640948854 24.279972814095885 1.0872543559199155 1.0001557702232289 0.3835701165682829 0.058517194082178946 614.1594548377208 887829.7882573399 0.010442883682626422 0.01805321289412453 5.693198929878296e-08 7.244643640948854 -0.0870985856966866 NGVIQHTGAAAEEFNDDT(ph)D ddPTM_A549_MK2206_60min_R1 2 NGVIQHTGAAAEEFNDDTD 19 0 Q8WU17 Q8WU17 RNF139 E3 ubiquitin-protein ligase RNF139 1 NGVIQHTGAAAEEFNDDT(1)D;NGVIQHTGAAAEEFNDDT(1)D 170.91 4.5906e-34 18029800.0 1845.75 2285.9 1620.47 1615.51 2931.3 2632.6 2080.48 2175.84 2853.5 3188.6000000000004 2683.9 True False 2157.2674757450586 2402.242546131679 1850.277012824773 2011.3100225229987 2500.1096530696286 2911.1799846215504 2458.476285830682 2484.271983230536 2207.1868061031514 2468.2930454211246 2017.4135581282928 1.069323375493976 1.1907536441662565 0.9171530573738262 0.9969745739138598 1.2392648215317683 1.4430258847484263 1.2186278197275509 1.2314143390289214 1.0940675981928691 1.223493832227016 1.0 10.978291143081444 -9.401336168889298 1.445768407523109 1.0254671641369977 1.162152881278965 0.0 0.1453215943041817 0.5197779730603659 2.23768400553354 0.033727248448356 0.027907329307910688 3.9688421934320713e-10 9.401336168889298 0.1366857171419673 NGVIQHTGAAAEEFNDDT(ph)D ddPTM_A549_PD325901_60min_R1 2 NGVIQHTGAAAEEFNDDTD 19 0 Q8WU17 Q8WU17 RNF139 E3 ubiquitin-protein ligase RNF139 1 NGVIQHTGAAAEEFNDDT(1)D;NGVIQHTGAAAEEFNDDT(1)D 287.01 4.256599999999999e-127 30827000.0 4120.1 4165.799999999999 3812.2999999999997 4115.9 6048.5 4440.1 4723.6 4472.1 4912.7 4152.6 5646.2 True False 4538.369518942689 4516.866585876372 4071.0256032222233 4370.129795112882 5623.674226192221 4403.941297710462 4903.359182853098 4382.900457205421 4706.236303374444 3890.404127312852 4951.753194210753 0.9165177142206192 0.9121752253640548 0.8221382293410312 0.8825419247918365 1.1356935625885054 0.8893701129650899 0.9902268934941602 0.8851209430893294 0.9504181890318464 0.7856619614768449 1.0 12.273723694052393 -2.0000000000095817 0.09076150310237467 1.0347057540170381 0.6396393779141106 0.0 0.09721972957101044 193.52115314851363 1.2239315840764884 0.6747329898307437 9.54472627704186 0.009999999999779375 2.0000000000095817 -0.3950663761029275 NGYGFINR ddPTM_A549_PD325901_60min_R1 1 NGYGFINR 8 0 P67809;C9J5V9;Q9Y2T7;P16989-2;P16989;P16989-3 P67809;P16989-2 YBX1;YBX2;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 0 56.547 0.05139199999999999 5988900.0 2815.9 3218.3 3018.6 3462.9 3047.8 3264.0 3269.8 3040.9 3824.5 3397.9 3664.9 False True 3101.768095043984 3489.517435624834 3223.460348316399 3676.7954681834867 2833.7330423392004 3237.4190661757502 3394.234028303214 2980.2468639600975 3663.769565057009 3183.35601411076 3214.1405337152373 0.9650381066127928 1.0856766837109288 1.0028996288442897 1.1439435922652283 0.8816456569382415 1.0072425372245952 1.0560316180014089 0.9272297936877137 1.139890906021475 0.9904221612958244 1.0 11.65021729483924 -8.769296929428684 24.997415595708645 1.0660595827719896 1.0128854174093262 0.014102045617263026 0.07795923417488934 342.50094999567114 1089603.479950305 0.013767540971027913 0.014786641086198366 1.7009951313907187e-09 8.769296929428684 -0.053174165362663395 NHAAPFS(ph)K ddPTM_A549_PD325901_60min_R1 1 NHAAPFSK 8 0 P34932;A0A087WYC1;A0A087WTS8;A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4 P34932;A0A0A0MSM0 HSPA4;HSPH1 Heat shock 70 kDa protein 4;Heat shock protein 105 kDa 1 NHAAPFS(1)K 55.401 0.006438500000000001 4388000.0 867.28 759.54 822.67 626.27 907.03 1034.9 1019.5 1018.8 961.22 873.51 954.02 True False 955.3256271422084 823.5491014058623 878.5013333165878 664.9532755376333 843.3233418836289 1026.4721175200013 1058.297630391806 998.4792347668617 920.8232661325918 818.3564295258504 836.6815880310552 1.1418030954766862 0.9843040807721163 1.0499828678959533 0.794750697338104 1.0079382096458027 1.2268372248223798 1.2648750080449065 1.1933801927165166 1.1005659492275257 0.9780978107235168 1.0 9.70853487734381 -7.0224616074803325 24.372714357762863 1.091169902809611 0.9843436325140213 0.21278446526695804 0.11491460798719294 849.9759007440509 922295.1023029434 0.018299555514328984 0.031868673405265446 9.4959494162511e-08 7.0224616074803325 -0.10682627029558955 NHAGS(ph)PGCEESDAGK ddPTM_A549_MK2206_60min_R1 2 NHAGSPGCEESDAGK 15 0 P42575 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 1 NHAGS(1)PGCEESDAGK;NHAGS(1)PGCEESDAGK 131.48 7.3919e-10 12997300.0 3251.8 2959.1000000000004 2798.5 2566.0 4360.0 3995.6000000000004 3487.8 3847.6 4949.0 5219.200000000001 4675.2 True False 3800.6243411230002 3109.705550661992 3195.369380729126 3194.670115192115 3718.649775657075 4418.411739935375 4121.48811318554 4393.009082780815 3828.0594019290324 4040.1790951081744 3514.218811044148 1.0814990600980123 0.8848924093426139 0.909268760012048 0.9090697782255943 1.0581725201545393 1.2572955690891008 1.1728034976743407 1.2500670330984769 1.0893059333410249 1.1496663447395732 1.0 11.778988307476881 -6.846071033050046 5.679098223140869 1.0873778267578225 0.9395591498925634 0.43497912747133194 0.09506878982549563 0.20678178182634857 10.75019603305956 0.015857988089029607 0.030448165524986272 1.4253744408020536e-07 6.846071033050046 -0.14781867686525907 NHAGS(ph)PGCEESDAGKEK ddPTM_A549_MK2206_60min_R1 1 NHAGSPGCEESDAGKEK 17 1 P42575 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 1 NHAGS(0.986)PGCEES(0.014)DAGKEK 48.824 0.0060921000000000005 4016300.0 665.07 645.52 622.15 316.39 830.52 909.94 888.17 985.54 1218.7 1433.1 1283.1 True False 777.3175565996297 678.3742107611537 710.3802251994377 393.90556420328664 708.351608183191 1006.2292468307132 1049.5389923413036 1125.2433130896668 942.666395863995 1109.3617146688243 964.4708582415188 0.8059523519631083 0.7033641348148209 0.7365491856276981 0.40841624278983285 0.734445838492933 1.0432966825615972 1.0882018708734094 1.1666949845859294 0.9773923056449015 1.150228340430606 1.0 9.913593837270874 -7.190410291381308 4.744873958413292 1.0155118709388276 0.6620152563268199 0.739436443657609 0.11396549823067956 0.09292328119695024 4.024152416133113 0.016114295238579147 0.028194634094426498 6.45044547624221e-08 7.190410291381308 -0.35349661461200765 NHEEEVK ddPTM_A549_MK2206_60min_R1 2 NHEEEVK 7 0 P05783;F8VZY9;CON__Q148H6 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 121.62 0.0069679 89517000.0 1954.73 1709.75 1411.3600000000001 651.27 1912.3400000000001 1548.0900000000001 2035.29 2166.77 1945.7400000000002 1992.56 2231.7 False True 2284.6406354398696 1796.768972067299 1611.512070461268 810.8311792366216 1631.0373192614788 1711.907856261027 2405.075847779516 2473.916282954825 1505.032996708304 1542.4393121069788 1677.507298213386 1.361925899143989 1.0710945782357737 0.9606587537220221 0.48335478486453676 0.972298195661265 1.0205069498560626 1.4337200501845926 1.4747573888886487 0.8971841722007562 0.9194829219221519 1.0 10.712103327733361 NHEEEVK ddPTM_A549_PD325901_60min_R1 2 NHEEEVK 7 0 P05783;F8VZY9;CON__Q148H6 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 122.74 0.0068167 117614000.0 7060.200000000001 6777.5 6266.8 5895.3 7927.2 6094.1 5235.9 4388.6 6187.9 8173.299999999999 9653.6 False True 7776.946306555465 7348.663710638316 6692.102733329756 6259.439291802271 7370.420819355375 6044.471670092415 5435.155039694418 4301.065930209903 5927.844082001895 7657.236443135898 8466.268399212377 0.918580174859441 0.8679932367041385 0.7904430166603656 0.7393386314547495 0.8705630948389317 0.7139475604924994 0.6419776439168943 0.5080238101841934 0.700172000518359 0.9044405494926497 1.0 13.047510510629403 -10.718393417220149 1.0791621820515709 0.9939084173492113 0.7463166110953793 0.3126497179776878 0.11291343367361913 0.4140099271877427 0.8878372018228339 0.0730040604381516 0.020914226916166727 1.9125226305156007e-11 10.718393417220149 -0.24759180625383204 NHET(ph)DGGSAHGDDDDDGPHFEPVVPLPDKIEVK ddPTM_A549_MK2206_60min_R1 7 NHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVK 33 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NHET(0.546)DGGS(0.454)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.5)DGGS(0.5)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.584)DGGS(0.416)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.53)DGGS(0.47)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.5)DGGS(0.5)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.636)DGGS(0.364)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.535)DGGS(0.465)AHGDDDDDGPHFEPVVPLPDKIEVK 144.0 1.1833e-39 40290900.0 5221.179999999999 6721.170000000001 6397.79 5392.44 7928.450000000001 6160.049999999999 5970.67 7624.86 10320.67 9731.789999999999 10474.46 True False 6102.387538404757 7063.248844561813 7305.092824847238 6713.5880420758285 6762.185507754203 6811.902402289743 7055.463453395698 8705.70725515441 7983.054723723362 7533.371879978304 7873.362501610516 0.7750675187579003 0.8971070293177797 0.9278237631447762 0.8526964229962163 0.8588688132130308 0.865183382690223 0.8961182026043492 1.1057165541880785 1.013932068044677 0.9568176085423901 1.0 12.942764188294637 -8.092723142209932 6.657943172501972 1.0140698643723962 0.8677400705421212 0.7005121315310481 0.04794308970290956 0.09764980283802316 5.970915637167297 0.006977943007698087 0.009042459415221579 8.077497974562062e-09 8.092723142209932 -0.146329793830275 NHETDGGS(ph)AHGDDDDDGPHFEPVVPLPDKIEVK ddPTM_A549_PD325901_60min_R1 5 NHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVK 33 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NHET(0.187)DGGS(0.813)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.335)DGGS(0.665)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.097)DGGS(0.903)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.189)DGGS(0.811)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.118)DGGS(0.882)AHGDDDDDGPHFEPVVPLPDKIEVK 161.75 2.4296e-50 211722000.0 9147.5 10475.2 10840.8 10239.8 10861.91 10585.95 10691.62 13849.2 10160.96 10724.87 13261.849999999999 True False 10076.147465966416 11357.981866717593 11576.521879026175 10872.289189726887 10099.006913155246 10499.741532960537 11098.495449778957 13572.966841512784 9733.93018689022 10047.699877882233 11630.726523793674 0.8663386113802124 0.9765496457578888 0.9953395306254851 0.9347902014104446 0.868304047257504 0.9027588699193113 0.9542392237556355 1.1669921748865604 0.8369150600331747 0.8638927118892402 1.0 13.505653598418762 -11.35720938754109 2.0234408197767237 1.0005165558890023 0.9287291608787612 0.0 0.09466691742810064 0.7736082797001883 5.724150425128044 0.07100121661584381 0.013427968425875576 4.393297491603664e-12 11.35720938754109 -0.07178739501024112 NHGIHTAHK ddPTM_A549_MK2206_60min_R1 1 NHGIHTAHK 9 0 D3YTI2;P24666-2 D3YTI2 ACP1 Low molecular weight phosphotyrosine protein phosphatase 0 46.158 0.038888 2119200.0 312.55 281.24 208.4 88.624 461.27 296.42 224.42 301.74 457.93 469.79 275.55 False True 365.3007988861536 295.5539147268354 237.95425368731458 110.33688397848252 393.4177940406741 327.78696765232866 265.19420906046753 344.5125690399948 354.2095861639446 363.66411271667505 207.12333020688197 1.763687357292288 1.4269465174764517 1.1488529730071335 0.5327110367927853 1.8994373721575195 1.5825690294035135 1.2803686035541353 1.663320924281604 1.7101385237971394 1.7557853688111074 1.0 7.694346256505888 NHGIHTAHK ddPTM_A549_PD325901_60min_R1 1 NHGIHTAHK 9 0 D3YTI2;P24666-2 D3YTI2 ACP1 Low molecular weight phosphotyrosine protein phosphatase 0 46.158 0.038888 4519300.0 493.46 310.17 411.34 412.91 639.14 411.53 448.19 395.38 589.07 724.19 453.84 False True 543.5556959339477 336.3091144417099 439.25600598836127 438.4145129133509 594.2490113133003 408.1786361223368 465.2461157089784 387.49383573039034 564.3134364461058 678.4645198089613 398.02055712879576 1.3656472918258293 0.8449541321879095 1.103601304307059 1.1014871092989402 1.4930108525048038 1.0255214933289336 1.1688997147914375 0.9735523173115929 1.4177997250114376 1.7045966788831375 1.0 8.636699135372467 -6.549840749331507 24.999644781752096 1.1901077468959689 1.0827204575726161 0.03983002440765959 0.24418414125170104 544.1160967620782 504512.4107409164 0.029423101180359696 0.061250043899929774 2.819416588575008e-07 6.549840749331507 -0.10738728932335273 NHIQLVK ddPTM_A549_PD325901_60min_R1 1 NHIQLVK 7 0 Q9NR28-2;Q9NR28-3;Q9NR28 Q9NR28-2 DIABLO Diablo homolog, mitochondrial 0 70.268 0.022994999999999998 502870.0 1524.2 1870.0 2042.0 2081.9 2221.1 2190.6 2051.3 1727.1 2180.2 1989.1 2571.5 False True 1678.935661943264 2027.591462765571 2180.5823995435253 2210.4942346620455 2065.0975983790254 2172.7604798911143 2129.3633440144304 1692.6516356162597 2088.5737758497276 1863.5078865380706 2255.2218020815685 0.7444658704494641 0.8990652098583408 0.9669037420314264 0.9801671093378755 0.9156960066956348 0.9634353826686393 0.94419242579556 0.7505477439309708 0.9261057045129553 0.8263080309076711 1.0 11.139053614828732 NHIRT(ph)PASTK ddPTM_A549_PD325901_60min_R1 3 NHIRTPASTK 10 1 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 NHIRT(1)PASTK;NHIRT(1)PASTK;NHIRT(0.99)PAS(0.008)T(0.002)K 98.337 0.00027931 14855500.0 2732.45 2306.67 2909.45 2692.41 3375.36 3570.41 2869.9300000000003 2322.19 3228.4700000000003 3232.1000000000004 3694.24 True False 3009.8463124766263 2501.061176159069 3106.902772944128 2858.7140507932354 3138.2863579598525 3541.333764725663 2979.146756635957 2275.8720987271868 3092.7886332068506 3028.024654406365 3239.8718997168244 0.9290016413117126 0.771962982974009 0.9589585233958422 0.8823540372207607 0.9686451980506233 1.0930474643257306 0.9195260951201016 0.7024574332479335 0.954602135188484 0.9346124625084788 1.0 11.661721056631002 -14.999999992523506 0.11511005003677734 1.3142535809066715 0.8634101129452421 0.0 0.10112823537860917 150.57499991550114 1.217265817125687 10.83610603875516 0.4507805512821467 1.000000017215264e-15 14.999999992523506 -0.4508434679614295 NHLKDLS(ph)SEGQTK ddPTM_A549_PD325901_60min_R1 2 NHLKDLSSEGQTK 13 1 Q7L2Z9 Q7L2Z9 CENPQ Centromere protein Q 1 NHLKDLS(0.875)S(0.125)EGQTK;NHLKDLS(0.879)S(0.121)EGQTK 86.37799999999999 9.5944e-05 15766500.0 2886.0 2651.1000000000004 2285.3 2304.38 3215.9 2379.62 2717.1000000000004 2436.92 3005.8 3255.1000000000004 3566.2999999999997 True False 3178.9845954390903 2874.5175010362605 2440.3942006252773 2446.716318973305 2990.0262782527166 2360.2411636804964 2820.5007273541714 2388.313718873242 2879.476678951066 3049.572430481158 3127.6677086383415 1.0164073973264538 0.9190610284772571 0.7802600621175723 0.7822814144276552 0.9559923101787726 0.7546329672943577 0.9017904042568838 0.7636085228225911 0.9206466118501675 0.9750308263433831 1.0 11.610871529863372 -9.413413101084274 1.327741746711715 0.9798691063951916 0.858077677253212 0.24797443260405994 0.08247450249115813 0.34453773170020235 1.2550436281556976 0.01937546592328415 0.015712477842121018 3.859996393650843e-10 9.413413101084274 -0.1217914291419796 NHLLQFALES(ph)PAK ddPTM_A549_MK2206_60min_R1 2 NHLLQFALESPAK 13 0 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALES(1)PAK;NHLLQFALES(1)PAK 78.069 0.00026660000000000003 34375000.0 1276.14 1759.33 1473.72 886.04 2513.66 1792.1599999999999 1595.79 1915.4099999999999 2280.06 2409.67 1999.25 True False 1491.5212333725044 1848.872382293996 1682.715656161561 1103.1198397758476 2143.9039438252667 1981.8051816604723 1885.7243867596635 2186.9252331971106 1763.6300505076397 1865.323873411503 1502.7810485070192 0.9925073481957327 1.2303005711516066 1.1197344136281882 0.734052269871099 1.4266242883187736 1.3187584336582852 1.254823108551369 1.4552520710650256 1.1735775163386366 1.2412479351297798 1.0 10.553419112117638 -6.774697408125713 24.999871332527366 1.16383846711038 1.041415523599786 0.18243471701350167 0.18036895839907266 498.2021828085463 939430.2639739776 0.029519396634887576 0.05601389294782954 1.6799741215590923e-07 6.774697408125713 -0.12242294351059413 NHLLQFALES(ph)PAK ddPTM_A549_PD325901_60min_R1 4 NHLLQFALESPAK 13 0 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALES(1)PAK;NHLLQFALES(1)PAK;NHLLQFALES(1)PAK;NHLLQFALES(1)PAK 176.91 4.4057e-22 64535800.0 8109.4 8697.0 9344.7 10202.4 10978.199999999999 10482.9 9218.1 9725.800000000001 11236.300000000001 10512.7 10962.6 True False 8932.66031817525 9429.926712124157 9978.887536246024 10832.57907666845 10207.129104733967 10397.53073799442 9568.899839837874 9531.811289257503 10764.077386285802 9848.926327891399 9614.269697647054 0.9291044040881631 0.9808261062649395 1.0379246526325556 1.1267188686541172 1.0616645284281974 1.0814685945973679 0.9952809876115412 0.9914233310503312 1.1195938667000518 1.024407119586189 1.0 13.230961558909742 -5.623752348381763 2.6232161303229624 1.0552030874377394 0.9343294426190797 0.41436501056857156 0.04455558881343404 0.2422313754098724 3.0847966947455383 0.0074080558676875435 0.045099503857966836 2.3781960399883435e-06 5.623752348381763 -0.1208736448186597 NHLLQFALES(ph)PAKS(ph)PASSSSK ddPTM_A549_MK2206_60min_R1 1 NHLLQFALESPAKSPASSSSK 21 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 2 NHLLQFALES(0.334)PAKS(0.334)PAS(0.294)S(0.31)S(0.34)S(0.389)K 49.34 0.039 1299400.0 827.57 1209.4 1133.6 948.65 1616.7 1002.4 903.11 807.45 1590.2 1343.6 1203.3 True False 967.243583856068 1270.9532942349406 1294.36152581545 1181.0692925865171 1378.8855716295404 1108.473302660732 1067.1933969548118 921.9085102119166 1230.0222390275915 1040.0798268292733 904.4874006094757 1.069383148072936 1.4051641773876864 1.4310442853524143 1.305788551383547 1.5244939517127585 1.225526526863507 1.179887521081774 1.019260754313108 1.3599108602273053 1.149910796024832 1.0 9.820956596209047 -7.503740078807796 16.523460007776286 1.163053678229107 1.354983324290551 0.3321895348589069 0.13734382809297202 11.016129017120624 9509.59990776264 0.02444231457553431 0.038463462794154926 3.135161527834054e-08 7.503740078807796 0.19192964606144391 NHLLQFALES(ph)PAKS(ph)PASSSSK ddPTM_A549_PD325901_60min_R1 2 NHLLQFALESPAKSPASSSSK 21 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 2 NHLLQFALES(0.998)PAKS(0.944)PAS(0.045)S(0.01)S(0.002)S(0.001)K;NHLLQFALES(0.977)PAKS(0.906)PAS(0.037)S(0.04)S(0.018)S(0.02)K 80.711 0.00042761 7242900.0 3586.8 3532.7 3226.4 3826.8 4226.9 4284.0 4043.0 4093.1 4283.8 3613.2 3887.2 True False 3950.929295537398 3830.4130270117284 3445.3629059193104 4063.1727447066196 3930.017126013375 4249.112524355675 4196.8585774144885 4011.4599095251688 4103.766783315779 3385.06193536743 3409.0990429910457 1.1589364948666807 1.1235851404455044 1.0106373744121109 1.191861161399907 1.1528022731088772 1.2464033666289807 1.2310755787641432 1.1766920992725483 1.203768717647831 0.9929491319200494 1.0 11.735174798706199 -10.79128672047598 1.0132684258855178 0.9989930795963283 1.1670982904859597 0.5402841983306318 0.06003135195419422 0.37847993573509253 0.6831587120003155 0.04586191108166265 0.011230702156458355 1.6170121365149423e-11 10.79128672047598 0.16810521088963137 NHLLQFALES(ph)PAKSPASSSSK ddPTM_A549_MK2206_60min_R1 1 NHLLQFALESPAKSPASSSSK 21 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALES(0.936)PAKS(0.062)PAS(0.001)S(0.001)SSK 103.53 4.3394e-10 10253000.0 1308.6 1559.8 1745.5 1520.9 2611.8 1807.0 1893.6 1738.7 2320.1 2650.3 2556.3 True False 1529.4596878016976 1639.1871575555324 1993.0381468867922 1893.5205682757946 2227.6076798305394 1998.2155406104773 2237.6426088445833 1985.1660495454312 1794.6010544383814 2051.595389286711 1921.500159709137 0.7959716683204524 0.8530767740366261 1.0372302790692893 0.9854386733761303 1.1593065285863617 1.0399247330340857 1.164528973644895 1.0331334293752708 0.9339583165634685 1.0677050318836647 1.0 10.908017380975148 -5.660515384922051 4.4193714241298325 1.0075065915737962 0.8093886405159595 0.5292276127377176 0.07414368715861548 0.14670501557052248 4.899509285460652 0.011513805217461258 0.04891275158862001 2.1851669085429914e-06 5.660515384922051 -0.1981179510578367 NHLLQFALES(ph)PAKSPASSSSK ddPTM_A549_PD325901_60min_R1 3 NHLLQFALESPAKSPASSSSK 21 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALES(0.993)PAKS(0.006)PASSSSK;NHLLQFALES(0.928)PAKS(0.013)PAS(0.015)S(0.015)S(0.015)S(0.015)K;NHLLQFALES(0.996)PAKS(0.003)PASSSSK 135.58 3.7918e-18 46376500.0 8600.5 7971.900000000001 7986.9 9045.7 11090.0 11245.400000000001 10445.7 9561.8 10732.400000000001 8649.5 9335.9 True False 9473.616428646534 8643.719990385482 8528.93906313133 9604.432344724752 10311.076658423037 11153.821190800481 10843.216829606372 9371.08239791301 10281.354550926348 8103.369093867097 8187.643485146141 1.1570626451717614 1.0557030244498 1.0416842255777699 1.1730398816398053 1.2593460715686005 1.3622748976595673 1.3243391519523193 1.1445396242415586 1.25571595411776 0.9897071249582456 1.0 12.999232569069147 -4.304793199639944 13.8384574179796 1.1546737786245347 1.1613969463962162 0.0 0.1232867754736135 0.0 0.0 0.01810074860633067 0.0 4.956861681894598e-05 4.304793199639944 0.006723167771681471 NHLLQFALESPAKS(ph)PASSSS(ph)K ddPTM_A549_MK2206_60min_R1 1 NHLLQFALESPAKSPASSSSK 21 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 2 NHLLQFALES(0.264)PAKS(0.305)PAS(0.317)S(0.333)S(0.365)S(0.416)K 48.848 0.040536 1348100.0 720.02 602.75 803.84 788.71 1045.8 777.38 670.58 1017.9 907.87 810.0 1030.6 True False 841.5417732011141 633.4274004465942 917.8365992514924 981.9439854065369 891.9642053628834 859.6418356169196 792.4157058718848 1162.1904421880108 702.238894570481 627.0204374305686 774.673576886999 1.0863178999635212 0.8176700733643221 1.1848043184069728 1.2675583816250031 1.1514065175002006 1.10968266023912 1.0229027160784057 1.5002324551435406 0.9064965109464629 0.8093995408365807 1.0 9.597444721826411 NHLLQFALESPAKS(ph)PASSSSK ddPTM_A549_MK2206_60min_R1 2 NHLLQFALESPAKSPASSSSK 21 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALESPAKS(0.991)PAS(0.006)S(0.001)S(0.001)S(0.001)K;NHLLQFALES(0.006)PAKS(0.832)PAS(0.032)S(0.031)S(0.042)S(0.058)K 167.51 2.6486e-35 16938800.0 3007.9 3514.1 4115.3 3020.3999999999996 5643.0 3742.5 3769.4 3959.5 6066.8 5857.2 5192.8 True False 3515.55998390549 3692.952680065327 4698.91142130233 3760.3981355909063 4812.922175236899 4138.52886592956 4454.251188096098 4520.771250460193 4692.679486688837 4534.054451997931 3903.284446010878 0.9006671259888223 0.9461141587668538 1.203835253693739 0.9633933134014867 1.233044181588063 1.0602683261167656 1.1411546480165706 1.158196722014554 1.202238666332584 1.1615998051670804 1.0 11.930472885511312 -5.634769673548584 6.45151954001652 1.1077621185547808 0.9124356762103579 0.46098699702931445 0.08280851863959268 0.15062051191408662 7.771800784162767 0.01245317702399564 0.0494296803522593 2.3186239975002045e-06 5.634769673548584 -0.19532644234442287 NHLLQFALESPAKS(ph)PASSSSK ddPTM_A549_PD325901_60min_R1 2 NHLLQFALESPAKSPASSSSK 21 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALES(0.004)PAKS(0.895)PAS(0.072)S(0.021)S(0.006)S(0.002)K;NHLLQFALES(0.002)PAKS(0.954)PAS(0.027)S(0.006)S(0.009)S(0.002)K 170.27 2.1028999999999998e-35 32926000.0 7269.1 7690.8 9009.5 8672.7 10625.900000000001 11665.4 9356.7 9865.8 12733.8 9559.0 10597.0 True False 8007.053680771416 8338.930706864945 9620.93884852468 9208.392981869218 9879.573441364957 11570.400850051035 9712.774338682702 9669.018879429626 12198.642668982327 8955.44310865085 9293.636179917698 0.8615630659260781 0.8972732034512236 1.0352179343230845 0.9908277883491201 1.0630471486191155 1.2449810414413598 1.0450994799721884 1.040391370206968 1.312580182054249 0.9636102527880704 1.0 13.182027453106356 -6.01784976391506 0.7754199568084458 1.140470492260986 0.8208051630592412 0.32215220971415226 0.10500884846894541 0.9418196786144124 0.7198741335675239 0.02015165331327745 0.20744248122031045 9.597325757020436e-07 6.01784976391506 -0.31966532920174484 NHPMT(ph)PEAVK ddPTM_A549_MK2206_60min_R1 1 NHPMTPEAVK 10 0 E7ER27;A0A2R8YD50;P51659-3;P51659;A0A2R8Y7L2;E7ET17;P51659-2 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 1 NHPMT(1)PEAVK 46.606 0.0091766 1997400.0 705.77 521.33 520.0 587.58 962.28 614.41 598.02 805.49 1191.1 811.61 909.21 True False 824.8867215801646 547.8634702195318 593.7438191813991 731.5371263774683 820.7298867246077 679.4264583876497 706.6724931037377 919.6706742096675 921.3177517958513 628.2667373123749 683.4280640805634 1.2069839752482359 0.8016402881502813 0.8687729556148396 1.0703937470897211 1.20090164548446 0.994144803376933 1.0340115225652105 1.3456729721026723 1.3480829954434606 0.9192872963998064 1.0 9.41664568114529 -6.494320435934922 4.638883358409557 1.1604362860707955 0.9447744937104 0.1260710489606115 0.16347280954779891 0.23065468748987392 12.119064999639784 0.024557705740167413 0.05657273412987721 3.203904512104257e-07 6.494320435934922 -0.2156617923603955 NHPMT(ph)PEAVK ddPTM_A549_PD325901_60min_R1 2 NHPMTPEAVK 10 0 E7ER27;A0A2R8YD50;P51659-3;P51659;A0A2R8Y7L2;E7ET17;P51659-2 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 1 NHPMT(1)PEAVK;NHPMT(1)PEAVK 75.479 0.00040612 14684400.0 3826.2 3747.2 4615.4 3854.3 4665.2 4961.200000000001 4329.8 4575.0 4731.3 4842.6 5913.8 True False 4214.633007300435 4062.989694799542 4928.628798654841 4092.3713572495885 4337.53244606629 4920.79763208062 4494.572908357471 4483.748035981934 4532.459914538951 4536.837409556712 5186.440090666918 0.8126254104206726 0.7833869906471989 0.9502912812053855 0.7890520830682834 0.8363217101209265 0.9487813502243426 0.8666007569325879 0.8645136081009612 0.8739057687555642 0.8747497956682897 1.0 12.340528914625818 -14.999999999951212 0.15545883707920505 1.5398213029860353 0.8152887760254376 0.11165103460697878 0.06228047765806749 31.89813790188907 0.32287830316496163 5.247066150702389 0.08350211505585957 1.0000000001123376e-15 14.999999999951212 -0.7245325269605977 NHQDLHR ddPTM_A549_MK2206_60min_R1 1 NHQDLHR 7 0 F8WCJ2;C9JYP1;C9J6Y8;X6RET8;C9JP05;C9J3Q3;C9J6N5;C9JQ40;C9JW51;A0A1C7CYX8;Q9H098;Q9H098-2 F8WCJ2 FAM107B Protein FAM107B 0 107.32 0.0099733 5692200.0 786.1 1076.1 649.59 336.12 760.57 340.36 367.3 348.9 731.48 1314.0 1109.9 False True 918.7744617002252 1130.8688936052758 741.7116298116248 418.4694150890003 648.6911605209866 376.3766692873173 434.0336555917911 398.3576434614374 565.8009479335315 1017.1664873873664 834.2811983183395 1.1012767200701619 1.3555008741474315 0.8890427248111222 0.5015927674416121 0.7775449834283132 0.45113886066949577 0.5202486361513032 0.4774860613716417 0.6781897387523731 1.2192130056840171 1.0 9.704389922417038 -3.6431314534888486 11.071778187119389 0.8000187932296279 0.9747039467059103 0.0 0.3062054578635741 0.0 0.0 0.039965796488808714 0.0 0.00022744089020198776 3.6431314534888486 0.17468515347628244 NHQDLHR ddPTM_A549_PD325901_60min_R1 2 NHQDLHR 7 0 F8WCJ2;C9JYP1;C9J6Y8;X6RET8;C9JP05;C9J3Q3;C9J6N5;C9JQ40;C9JW51;A0A1C7CYX8;Q9H098;Q9H098-2 F8WCJ2 FAM107B Protein FAM107B 0 ; 107.32 0.0099733 10337500.0 1077.23 1194.88 966.8600000000001 740.79 1250.8 1054.63 1166.0 968.72 1357.08 1390.23 1968.68 False True 1186.5895965851882 1295.5767310317244 1032.4769338014955 786.5469158438431 1162.9481230257463 1046.0414429414623 1210.3727680596826 949.3981196538616 1300.046646972824 1302.4506405418638 1726.5448404907422 0.6872625423663595 0.7503869581884001 0.5980018066070214 0.4555612442827027 0.6735696031475193 0.605858254248492 0.7010375518052887 0.5498832682411021 0.7529758952587104 0.7543682677663115 1.0 10.753672087902656 -9.798553520489692 0.6404051747776648 0.9902049715454485 0.6223866997287741 0.38306276248041504 0.10539388634490356 0.2595789036012385 0.2229184617852191 0.04316330814939288 0.019841210054581993 1.5901807050617115e-10 9.798553520489692 -0.36781827181667437 NHS(ph)GSRTPPVALNSSR ddPTM_A549_MK2206_60min_R1 1 NHSGSRTPPVALNSSR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 NHS(0.333)GS(0.333)RT(0.333)PPVALNSSR 50.425 0.008870399999999999 3767100.0 861.56 789.0 925.8 789.39 884.21 726.98 701.35 779.9 915.09 1270.4 1099.5 True False 1006.9702648803527 829.1567299085234 1057.0923611502678 982.7905854370639 754.1438803059041 803.9085410697321 828.7762165785534 890.4532133435797 707.8235760984519 983.4157576688814 826.4638053437378 1.218408184810392 1.0032583696314028 1.279054635321396 1.1891513930586561 0.9124947462063933 0.9727087089257047 1.0027979582649162 1.0774255419125436 0.8564483665489238 1.1899078354191992 1.0 9.690807828415714 -6.758943438496994 24.999832560388704 0.9493323734337903 1.1679950863833461 0.29294154573975895 0.10983566164855922 36.199599835406836 362574.41984184727 0.012759182383180996 0.02561828328176426 1.7420337370395452e-07 6.758943438496994 0.21866271294955586 NHSDSSTSESEVSSVS(ph)PLK ddPTM_A549_MK2206_60min_R1 1 NHSDSSTSESEVSSVSPLK 19 0 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 NHSDSSTSESEVS(0.012)S(0.054)VS(0.934)PLK 88.16799999999999 1.953e-06 3447000.0 1290.8 1732.5 1290.0 1127.7 1564.9 947.39 1303.1 1185.3 1848.4 1837.2 1489.1 True False 1508.655482969916 1820.6768498941913 1472.9413975846242 1403.9865506243766 1334.7052830104942 1047.642180973414 1539.856402400389 1353.3199048290105 1429.7403512882643 1422.175244009186 1119.31537293075 1.347837722463992 1.6265986279872466 1.315930642253184 1.25432615737981 1.1924300472312641 0.9359669368520588 1.3757127255105224 1.2090604109953003 1.2773346867779682 1.2705759952938422 1.0 10.128400865086967 -2.0000000000000004 0.0382495122641173 0.30238524284164253 2.8350105855335923 0.20081666634865747 0.15683628101105934 514.0061949907164 1.4581114748226756 26.850891447077178 85.25274151520411 0.00999999999999999 2.0000000000000004 2.53262534269195 NHSGNDERDEEDEER ddPTM_A549_MK2206_60min_R1 1 NHSGNDERDEEDEER 15 1 A0A0D9SGE8;Q8IWS0-3;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 0 44.294 0.057830999999999994 1018200.0 203.01 128.88 126.12 0.0 184.81 122.96 189.34 139.57 240.0 187.84 248.87 False True 237.27312488202853 135.43944150901208 144.00571245222707 0.0 157.6246938163266 135.97154558575775 223.7406271433424 159.3544749151986 185.6403832012463 145.40681353945428 187.06871053742236 1.268374193633857 0.7240090612690568 0.7698011711232665 0.0 0.8426031983835929 0.7268534924687856 1.1960344757846821 0.8518499670917461 0.9923646913902775 0.7772909382959916 1.0 7.547424460659786 -7.640072761280994 7.910694132666247 0.9965755610479683 0.6939019806550042 0.13635451632820694 0.29377073282596333 0.28717663972059165 18.832297948955926 0.04233574309464848 0.06283742625853217 2.290483875148019e-08 7.640072761280994 -0.3026735803929641 NHSGNDERDEEDEERESK ddPTM_A549_MK2206_60min_R1 3 NHSGNDERDEEDEERESK 18 2 A0A0D9SGE8;Q8IWS0-3;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 0 ;; 191.64 8.603199999999999e-41 63659300.0 2205.42 2202.58 2034.5 643.965 3715.2 2499.06 2578.5099999999998 2689.6600000000003 3433.34 3493.08 4000.7300000000005 False True 2577.640978657819 2314.6819140201724 2323.022692547225 801.7364539086872 3168.699001495681 2763.508870458228 3046.9918902259415 3070.927541738292 2655.6939719173624 2703.9908019505806 3007.238326469168 0.857145559754905 0.7697035162284148 0.7724770837417171 0.26660223330221217 1.053690681448612 0.9189523976647687 1.0132192927334258 1.0211786391216628 0.8831006004886358 0.8991607941913158 1.0 11.554223492045336 NHSGNDERDEEDEERESK ddPTM_A549_PD325901_60min_R1 3 NHSGNDERDEEDEERESK 18 2 A0A0D9SGE8;Q8IWS0-3;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 0 ;; 202.6 2.2252e-49 52157500.0 3598.1800000000003 3467.39 3246.9299999999994 3647.96 4909.16 4369.92 4672.13 2994.93 5823.0199999999995 4405.900000000001 4377.879999999999 False True 3963.4645847598845 3759.5991241062634 3467.2861951762275 3873.286204081729 4564.357537282598 4334.332820362361 4849.9304638376325 2935.1937716728653 5578.2987194975185 4127.710722084403 3839.42851366784 1.0323058680870065 0.9792080021082838 0.9030735128504576 1.0088184192760357 1.18881169971888 1.1289005134312906 1.2631907187677915 0.7644871525082385 1.4528981851438407 1.0750846662179847 1.0 11.906675871167137 -6.702257898329297 4.452992108209934 1.1799367383534527 0.9703122427509383 0.09409473172730387 0.16757746506824722 0.27769265589536574 11.096874320664233 0.028620525915815844 0.06025647489117508 1.984915859071532e-07 6.702257898329297 -0.2096244956025144 NHSGS(ph)RT(ph)PPVALNSSR ddPTM_A549_MK2206_60min_R1 1 NHSGSRTPPVALNSSR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 NHS(0.346)GS(0.795)RT(0.852)PPVALNS(0.004)S(0.003)R 46.368 0.015521 25015000.0 1548.0 1714.2 1786.1 1341.5 2872.0 2136.7 1955.6 2164.9 3331.8 3418.6 3100.0 True False 1809.2645550336445 1801.445458059811 2039.395837384418 1670.167560222224 2449.5326045153947 2362.8041757733304 2310.9072063035837 2471.78120472819 2577.1526197913013 2646.335885679186 2330.1844443525115 0.776446928662072 0.7730913586801403 0.8752079013861519 0.7167533730087678 1.051218331858724 1.0139987765774838 0.9917271621584941 1.0607663314888467 1.1059865351162856 1.1356765736261378 1.0 11.186228439722345 -6.770935083229925 24.999968102132325 1.044757358693462 0.7909141379571738 0.8519859897921628 0.05326358077018879 53.61273029255152 141150.0531318083 0.007591564837187528 0.014480249033514768 1.694591082869598e-07 6.770935083229925 -0.2538432207362882 NHSGSRT(ph)PPVALNSSR ddPTM_A549_PD325901_60min_R1 1 NHSGSRTPPVALNSSR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 NHS(0.34)GS(0.206)RT(0.454)PPVALNSSR 102.54 6.3412e-07 26434000.0 3460.2 4055.5 4516.0 4030.8 5817.0 4558.3 4353.2 4926.5 4919.3 5461.3 5353.6 True False 3811.4769567353924 4397.271217778486 4822.482916914084 4279.773361389006 5408.433987560576 4521.178716099546 4518.8634081624405 4828.237092735512 4712.55892832656 5116.4725859687105 4695.141139266528 0.811791774449366 0.9365578344393338 1.02712203400715 0.9115324192485489 1.1519214922696612 0.9629484145402799 0.9624552860339305 1.0283475937189348 1.0037097477037193 1.0897377595698865 1.0 12.196952811627265 -5.325108814809581 2.190562579539168 1.0038524842180598 0.7754329573769222 0.4763457879991314 0.06231222416918572 0.3066013945717282 1.8369164524934403 0.006982333910425676 0.1285298401530878 4.730327232286976e-06 5.325108814809581 -0.22841952684113764 NHSVNEEEQEEQGEGS(ph)EDEWEQVGPR ddPTM_A549_MK2206_60min_R1 4 NHSVNEEEQEEQGEGSEDEWEQVGPR 26 0 Q14694;Q14694-3;Q14694-2;H3BNA1 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR 171.99 1.5758e-48 694892900.0 2660.65 2730.41 2748.08 2293.98 3834.6000000000004 2723.88 2861.49 2823.09 4077.67 3766.39 4233.360000000001 True False 3109.7026733528864 2869.376206475958 3137.799066569268 2856.005202980676 3270.535419663904 3012.119173634791 3381.385693273494 3223.2716528505284 3154.0842557009414 2915.5598831285397 3182.09987720779 0.9772486073195068 0.9017241184125752 0.9860781206285093 0.8975221750383103 1.0277915671627862 0.9465822223901555 1.062627140490817 1.0129385554292738 0.9911958698381801 0.9162377032888319 1.0 11.635763403200635 -6.771111498934547 24.999997013930308 1.0002594618905025 0.9411086607632149 0.2430589115337093 0.04432411913138045 143.92473100278738 372010.03429491573 0.0046928844718018455 0.008949426742409707 1.6939028591376865e-07 6.771111498934547 -0.059150801127287655 NHSVNEEEQEEQGEGS(ph)EDEWEQVGPR ddPTM_A549_PD325901_60min_R1 4 NHSVNEEEQEEQGEGSEDEWEQVGPR 26 0 Q14694;Q14694-3;Q14694-2;H3BNA1 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR 177.78 5.4923999999999995e-49 904292600.0 2740.5299999999997 2750.0699999999997 2633.72 2495.79 3029.59 3002.83 2741.36 2202.31 2585.1800000000003 3423.45 3433.1299999999997 True False 3018.7465881284434 2981.828050271503 2812.4600770449424 2649.9492799496547 2816.8020499181084 2978.375948065114 2845.6839549297533 2158.383199371227 2476.5338748056147 3207.2927827503677 3010.876774404159 1.002613794689702 0.9903520714033857 0.9341000272591753 0.8801254513227529 0.9355421230998545 0.9892055275674718 0.945134646200492 0.7168620176421411 0.8225291369806097 1.065235485562201 1.0 11.555967949020292 -8.032108543153855 24.992851630200143 0.8956692265731347 0.952928267354244 0.07366929927622845 0.08949422538409625 1369.6698816819546 1066129.5596208696 0.014985808246862877 0.019356110350707934 9.287342393635713e-09 8.032108543153855 0.057259040781109216 NIDDAS(ph)QMDLFHRDS(ph)DDDQTEEQLDESEAR ddPTM_A549_PD325901_60min_R1 2 NIDDASQMDLFHRDSDDDQTEEQLDESEAR 30 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 2 NIDDAS(0.837)QMDLFHRDS(0.837)DDDQT(0.325)EEQLDESEAR;NIDDAS(0.68)QMDLFHRDS(0.68)DDDQT(0.639)EEQLDESEAR 43.831 0.013996999999999999 4109100.0 150.86 0.0 140.81 171.95 287.06 0.0 138.3 311.49 264.26 0.0 235.54 True False 166.1751961427378 0.0 150.36621335931622 182.5709609732161 266.89789590323863 0.0 143.56308218066388 305.277087590822 253.15407118890434 0.0 206.57007321108006 0.8044495195242273 0.0 0.7279186719640027 0.8838209627135055 1.2920453178641886 0.0 0.6949849024547057 1.4778379212698438 1.2255118432873053 0.0 1.0 7.69048744902458 -8.107445237575135 7.666647094456957 1.1365403456517846 0.6142690798810366 0.018153854116607193 0.5019014653166705 0.2564630784062761 16.419054206165217 0.05851489785816015 0.07567752037617884 7.808268924093739e-09 8.107445237575135 -0.522271265770748 NIDDASQMDLFHRDS(ph)DDDQTEEQLDESEAR ddPTM_A549_MK2206_60min_R1 2 NIDDASQMDLFHRDSDDDQTEEQLDESEAR 30 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 NIDDASQMDLFHRDS(1)DDDQTEEQLDESEAR;NIDDASQMDLFHRDS(1)DDDQTEEQLDESEAR 244.89 2.3005999999999994e-121 48948000.0 2118.0299999999997 2837.3 2237.1 2086.91 2717.9 1688.17 2227.69 2293.8999999999996 3099.7 2918.3999999999996 2959.8 True False 2475.501683138186 2981.7064509118563 2554.354419020592 2598.20304368495 2318.10051038036 1866.8110288834466 2632.4324373135755 2619.0673497741204 2397.6228992037627 2259.131413083174 2224.7999736756647 1.1126850559281196 1.3402132713916217 1.1481276740580233 1.1678366929285664 1.0419365955630386 0.8390916266504747 1.1832220732025847 1.1772147522309944 1.0776802083661354 1.015431247668881 1.0 11.119459917389031 -2.0000000025545828 0.2019786503727099 1.0156232856450778 2.0759855706318544 0.21478222135707625 0.10910596981677642 50.91805662786798 0.5686277603742378 0.08577374405059504 17.360601053893134 0.009999999941178558 2.0000000025545828 1.0603622849867766 NIDDASQMDLFHRDS(ph)DDDQTEEQLDESEAR ddPTM_A549_PD325901_60min_R1 2 NIDDASQMDLFHRDSDDDQTEEQLDESEAR 30 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 NIDDASQMDLFHRDS(1)DDDQTEEQLDESEAR;NIDDASQMDLFHRDS(1)DDDQTEEQLDESEAR 216.39 8.612999999999997e-91 127397000.0 4935.1 4963.6 4312.8 4788.1 5819.9 5616.1 5525.9 5673.5 5095.1 5683.3 5905.6 True False 5436.107718971397 5381.8999917557185 4605.492542973221 5083.850062435917 5411.130301565032 5570.364343612019 5736.191148388503 5560.337591725353 4880.97066568753 5324.455468081954 5179.248638682832 1.0495938886521363 1.0391275583024382 0.8892202063009034 0.9815806146987419 1.0447712938804132 1.0755159159589323 1.1075334567925494 1.073579968761538 0.9424090261341151 1.0280362731216646 1.0 12.33852710383452 -8.76906331757823 24.9996031745011 0.9728042634666548 1.0306839260650091 0.07409320234892758 0.058403257806318554 243.75084751530204 799279.8116151756 0.010893526866874158 0.011707034248444695 1.7019103617967475e-09 8.76906331757823 0.05787966259835431 NIDDGTSDRPYSHALVAGIDR ddPTM_A549_PD325901_60min_R1 1 NIDDGTSDRPYSHALVAGIDR 21 1 P61353;K7ELC7 P61353 RPL27 60S ribosomal protein L27 0 78.324 0.00072535 6845400.0 756.68 955.61 896.5 819.53 1052.4 948.72 741.5 1054.2 1177.6 866.62 1188.7 False True 833.4975965616256 1036.1426084135865 957.341881092444 870.1505068123279 978.4830545829032 940.9939388671136 769.7181882643691 1033.1731539960988 1128.1095672143106 811.9014653017055 1042.4974357901453 0.7995200447950154 0.9939042273310319 0.9183158137620177 0.8346787981812256 0.9385951667509633 0.9026342958377651 0.7383406057790183 0.9910558228021162 1.0821221506020078 0.7788042804022217 1.0 10.025828119768581 -8.508404932752507 24.874807967467593 1.0386645989248484 0.881981836579634 0.0 0.10359869934176431 361.54289993830656 621351.4189502132 0.011240164643966679 0.01333089892496059 3.1016662702965784e-09 8.508404932752507 -0.1566827623452144 NIDDGTSDRPYSHALVAGIDRYPR ddPTM_A549_PD325901_60min_R1 2 NIDDGTSDRPYSHALVAGIDRYPR 24 2 P61353;K7ELC7 P61353 RPL27 60S ribosomal protein L27 0 ; 170.28 1.7722e-41 14731200.0 870.3199999999999 929.41 953.11 1273.1 1385.22 1331.54 1419.5900000000001 1046.18 1217.03 1429.1599999999999 1544.45 False True 958.6742457042787 1007.7346424646781 1017.7937761160279 1351.7364955801186 1287.9269259495725 1320.6963797106796 1473.6132742794548 1025.3131191876676 1165.8824614358286 1338.9225936980288 1354.4924410752008 0.7077737879018947 0.7439942903370763 0.7514207870426355 0.997965329734218 0.9508557500160072 0.9750489110609626 1.0879449966584498 0.756972197182415 0.8607522833500253 0.9885050319182198 1.0 10.403536627073368 -6.208006955001476 7.0628249371332394 0.9387201320260676 0.7337746279868554 0.5810698340532054 0.08181764817012076 0.16108050675388033 18.108372083404166 0.01222715840630959 0.03250109792510773 6.194311551278196e-07 6.208006955001476 -0.2049455040392122 NIDNPALADIYTEHAHQVVVAK ddPTM_A549_MK2206_60min_R1 1 NIDNPALADIYTEHAHQVVVAK 22 0 O75083;D6RD66 O75083 WDR1 WD repeat-containing protein 1 0 57.826 0.0035359000000000002 881100.0 1135.5 1659.5 1813.0 1446.3 2710.8 1726.0 1709.0 1452.3 2741.8 2306.5 2749.5 False True 1327.1446396903777 1743.9614617024024 2070.1106618766867 1800.6435649268751 2312.044910975046 1908.6441743739267 2019.503178345688 1658.1679724822159 2120.786677754905 1785.4600480661788 2066.723267660397 0.6421491742301579 0.8438292097406092 1.001639016828859 0.87125528274778 1.1187007700321494 0.9235122109669663 0.9771521954324519 0.8023173679944678 1.0261589981302672 0.8639086209579389 1.0 11.013129510821788 -5.227889558905225 1.4529394582654038 0.9895335405501527 0.4765192861972518 0.47638114539479226 0.08975805489956629 0.613832904008235 1.083499094983313 0.011229317941596961 0.4644373258151597 5.91712087439301e-06 5.227889558905225 -0.5130142543529009 NIEDVIAQGIGK ddPTM_A549_PD325901_60min_R1 2 NIEDVIAQGIGK 12 0 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 0 ; 188.06 5.661999999999999e-19 23370000.0 20881.0 20825.0 21714.0 21860.0 27121.0 25293.0 25184.0 25159.0 24662.0 26300.0 27181.0 False True 23000.823748220257 22579.99583534385 23187.642616889385 23210.24255233792 25216.114522370706 25087.022193867433 26142.390901213592 24657.18400814631 23625.541904415193 24639.413511613926 23837.90931455534 0.9648842708775655 0.9472305451534118 0.9727213201004625 0.973669387112142 1.0578156913691183 1.0524002697899932 1.0966729739697072 1.0343685632317898 0.9910911897793622 1.0336230911227264 1.0 14.540970090442356 -6.5475794643070895 22.50807271829971 1.014413745914791 0.9623441174189332 0.45341636865756996 0.03296656105012072 73.95663968638372 67391.23016874191 0.005691879332808905 0.011849433633084787 2.8341350149261156e-07 6.5475794643070895 -0.052069628495857834 NIGLGFK ddPTM_A549_MK2206_60min_R1 2 NIGLGFK 7 0 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ; 122.78 0.017555 6052500.0 3994.6 5320.1 5462.1 4742.0 6739.6 4912.9 5176.0 5254.299999999999 6856.8 6731.299999999999 6399.4 False True 4668.7908214065865 5590.870366015636 6236.707912982151 5903.790212876473 5748.2137678941335 5432.779817080918 6116.412200770787 5999.113115618889 5303.745748059605 5210.694654909114 4810.252365544989 0.9705916585267611 1.1622821301564301 1.296544846098849 1.2273348182653177 1.1949921399275434 1.129416796506351 1.2715366546216156 1.2471514298479445 1.1025919941434725 1.0832476674680158 1.0 12.231896870335023 -9.340608532952528 1.2665673314729284 1.0264443779935386 1.1911747312084928 0.2784225640591149 0.08705829402912653 0.2837904356250995 0.945499484623598 0.02075747312080562 0.01723592408548368 4.5644816664851477e-10 9.340608532952528 0.16473035321495422 NIGLGFK ddPTM_A549_PD325901_60min_R1 2 NIGLGFK 7 0 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ; 122.78 0.017555 12032400.0 9743.3 9472.3 9330.4 10961.4 13054.599999999999 11763.7 11062.9 11352.2 11788.3 11375.900000000001 12098.099999999999 False True 10732.432643361633 10270.563964039735 9963.617052253141 11638.460782854378 12137.689931925092 11667.9003274423 11483.904713351161 11125.771465371383 11292.87874591751 10657.623732576763 10610.110396174612 1.0115288383079524 0.9679978417324199 0.9390681793325583 1.0969217424024662 1.143973953023263 1.09969641141991 1.0823548751661989 1.0486009145939412 1.0643507300347284 1.0044781189476861 1.0 13.373152046846903 -6.256640033551793 24.906530358665243 1.0526354104532958 0.9723782420946376 0.454883707090849 0.044011001912079024 359.2766833434371 1864481.93576661 0.0072971243638200855 0.018654651719872996 5.538089454504791e-07 6.256640033551793 -0.08025716835865815 NIGNGIIS(ph)SPLTGK ddPTM_A549_MK2206_60min_R1 1 NIGNGIISSPLTGK 14 0 A0A075B784;Q9P275;E9PEW0;K7EMM6 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 NIGNGIIS(0.509)S(0.489)PLT(0.002)GK 97.86 4.0891e-05 2445100.0 1800.0 1688.3 1977.1 1799.9 3381.1 2109.4 2465.9 2073.7 4163.4 2388.7 2616.7 True False 2103.7959942251687 1774.2272586876566 2257.482509429893 2240.875580800582 2883.7446689160856 2332.615307893602 2913.922110873394 2367.653325439903 3220.396547583618 1849.0910109758 1966.9011727539407 1.069599237301565 0.9020418937487777 1.147735605988326 1.1392924117600878 1.4661360259796041 1.1859341690399268 1.4814786585304078 1.2037479860387963 1.6372945383293487 0.9401036699707744 1.0 10.941708755669659 -6.278659329013136 1.8928472895531472 1.3136162990241602 0.9958375710231688 0.1846885738274976 0.20394643984198074 0.407686106990439 2.783186331612341 0.03421266879240586 0.11355715847952766 5.264300488022316e-07 6.278659329013136 -0.3177787280009914 NIGNGIIS(ph)SPLTGK ddPTM_A549_PD325901_60min_R1 1 NIGNGIISSPLTGK 14 0 A0A075B784;Q9P275;E9PEW0;K7EMM6 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 NIGNGIIS(0.703)S(0.294)PLT(0.003)GK 147.73 3.193e-13 13538000.0 3447.2 3652.3 4310.2 3865.0 4454.8 4062.4 4310.5 4958.0 4164.9 4352.3 4984.0 True False 3797.157206305485 3960.092138747966 4602.716091338148 4103.732271948127 4141.910216225691 4029.3171612844294 4474.538436296109 4859.108800524246 3989.8637368298946 4077.4950352318347 4370.999596179093 0.8687159819517641 0.9059923369038237 1.0530122435521636 0.9388544157120039 0.9475887894948195 0.9218296805167072 1.0236876800921062 1.1116699266620464 0.9128035015875161 0.9328518444147592 1.0 12.093747529500277 -7.723631844474316 24.994017017545364 0.9760956693529855 0.943337655117424 0.12578682401514485 0.06507693584191948 463.93831131645146 306701.99275105697 0.01075887600028647 0.01595782944250637 1.889592495715544e-08 7.723631844474316 -0.03275801423556157 NIGNGIIS(ph)SPLTGKR ddPTM_A549_PD325901_60min_R1 2 NIGNGIISSPLTGKR 15 1 A0A075B784;Q9P275;E9PEW0 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 NIGNGIIS(0.627)S(0.372)PLT(0.002)GKR;NIGNGIIS(0.607)S(0.378)PLT(0.015)GKR 63.918 0.0017985 17361800.0 4524.3 4026.3999999999996 5140.1 5059.2 5904.4 6297.200000000001 5527.200000000001 5947.1 5912.7 5177.8 5392.0 True False 4983.603605386375 4365.718858652028 5488.93809593226 5371.695293723146 5489.695313074205 6245.917691030005 5737.540620599893 5828.480425090306 5664.2097809681145 4850.872824351122 4728.818182704186 1.0538793019393462 0.9232156302011766 1.1607420467143859 1.135948790200965 1.1609021749140098 1.3208200124662568 1.2133138553698561 1.2325448346498438 1.197806632042897 1.025810812962392 1.0 12.207263957658133 -5.771690180916376 24.95800936148508 1.1382810766674858 0.988547459530998 0.3218550805758249 0.09180449438378938 203.4498851317753 495351.68666581454 0.015358047573886735 0.0485253484730139 1.6916472967651874e-06 5.771690180916376 -0.1497336171364878 NIGNGIISS(ph)PLTGK ddPTM_A549_MK2206_60min_R1 1 NIGNGIISSPLTGK 14 0 A0A075B784;Q9P275;E9PEW0;K7EMM6 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 NIGNGIIS(0.187)S(0.797)PLT(0.016)GK 134.61 5.693199999999999e-09 2427900.0 2348.8 2723.7 2961.1 2575.2 4089.6 3634.7 3884.2 3591.6 4868.4 4150.5 3838.1 True False 2745.220017353374 2862.3246961366867 3381.0285057270007 3206.1241156051224 3488.0252574603605 4019.3215414814067 4589.9088621008295 4100.720298813693 3765.715173237279 3212.8991673525607 2884.993843828829 0.9515514299018559 0.9921423930450899 1.1719361249103595 1.1113105570270834 1.2090234663486201 1.393182016689211 1.5909596729015258 1.4213965508402642 1.305276675474495 1.1136589335277578 1.0 11.494352525027786 -5.774275707503501 1.3123409872050547 1.222180531791659 0.9199537151667969 0.30946540812737067 0.16063774607250678 0.8809108691245948 2.2683072706127 0.030193892194727994 0.27655188493050953 1.681606171295852e-06 5.774275707503501 -0.30222681662486206 NIGNGIISS(ph)PLTGK ddPTM_A549_PD325901_60min_R1 1 NIGNGIISSPLTGK 14 0 A0A075B784;Q9P275;E9PEW0;K7EMM6 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 NIGNGIIS(0.082)S(0.918)PLTGK 141.54 6.3495e-13 10105000.0 2850.0 2682.8 3016.3 3115.5 3421.7 3247.9 3077.3 3474.9 2821.2 3308.1 3614.0 True False 3139.32990194089 2908.88897128742 3221.0042564853766 3307.937359186127 3181.3715962241754 3221.4501792378146 3194.4083354631753 3405.590393493685 2702.6347749872725 3099.226001436122 3169.500911033554 0.9904808328063154 0.9177750860272982 1.0162496704993935 1.0436776805050452 1.0037452853063704 1.0163903622880865 1.0078584689289454 1.0744879049058684 0.8527004253505517 0.9778277679767203 1.0 11.630039967340874 -8.75665580182241 24.999946466956995 0.930441868876744 1.0072564067900676 0.24237052020999195 0.049944898970684076 126.70368702978787 662179.0581405783 0.010655258724431793 0.011894793371125737 1.7512340716152398e-09 8.75665580182241 0.0768145379133236 NIGRDT(ph)PTSAGPNSFNK ddPTM_A549_MK2206_60min_R1 3 NIGRDTPTSAGPNSFNK 17 1 Q8WW12;Q8WW12-3 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 NIGRDT(0.994)PT(0.005)S(0.001)AGPNSFNK;NIGRDT(0.999)PT(0.001)SAGPNSFNK;NIGRDT(0.974)PT(0.022)S(0.004)AGPNSFNK 108.25 3.3093e-09 192577800.0 4479.31 6289.68 6413.41 5299.67 8258.4 5227.32 6022.8 6512.1 9493.8 8863.9 8166.200000000001 True False 5235.3080193848555 6609.797846604615 7322.927975723419 6598.089387911231 7043.6002998363265 5780.47153278581 7117.064799614041 7435.210117469834 7343.4694584833005 6861.538833754089 6138.307164345641 0.8528911765436151 1.0768111907135616 1.1929881935949131 1.0749037497237408 1.1474825405853069 0.9417045087547397 1.1594507425359086 1.2112802305914658 1.1963346345940207 1.1178226586002962 1.0 12.583625125544753 NIGRDT(ph)PTSAGPNSFNK ddPTM_A549_PD325901_60min_R1 5 NIGRDTPTSAGPNSFNK 17 1 Q8WW12;Q8WW12-3 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 NIGRDT(0.998)PT(0.002)SAGPNSFNK;NIGRDT(1)PTSAGPNSFNK;NIGRDT(0.972)PT(0.026)S(0.002)AGPNSFNK;NIGRDT(0.99)PT(0.01)SAGPNSFNK;NIGRDT(0.996)PT(0.004)SAGPNSFNK 169.26 3.6570999999999994e-30 293312400.0 18876.1 18934.399999999998 21891.100000000002 23406.6 26281.9 22176.1 20931.2 23515.8 25247.3 22925.100000000006 23371.1 True False 20792.387776149633 20530.068338282585 23376.7616878782 24852.372521754478 24435.950011632845 21995.505194062524 21727.74826999214 23046.758921211767 24186.243780850782 21477.605273577956 20496.602861609394 1.0144309238236864 1.0016327328435422 1.1405188384492442 1.212511784979917 1.1921951250468896 1.0731293055036262 1.0600658273322312 1.1244184744574857 1.1800123144383194 1.0478617075518404 1.0 14.323097194605078 -5.750728226679944 24.906878118948047 1.1051843374021695 1.0080317675986543 0.2886282095275349 0.06310345097876052 266.67142524495864 620083.0755195492 0.011057467435244456 0.04196767143343169 1.775300082765087e-06 5.750728226679944 -0.09715256980351517 NIGS(ph)DFIPR ddPTM_A549_MK2206_60min_R1 2 NIGSDFIPR 9 0 Q5T853;Q5T857;P41279-2;P41279 Q5T853 MAP3K8 Mitogen-activated protein kinase kinase kinase 8 1 NIGS(1)DFIPR;NIGS(1)DFIPR 69.979 0.0037641 15199700.0 865.8100000000001 1386.6599999999999 958.29 875.76 1508.87 1434.06 1495.9 1397.8400000000001 1579.4 1449.45 1637.88 True False 1011.9375609778291 1457.2350710962658 1094.1899316987367 1090.3212393143606 1286.9172217880027 1585.8112773480138 1767.685666756766 1595.988100705461 1221.6684217835355 1122.0182383132556 1231.149192811642 0.8219455179650588 1.1836380835114704 0.8887549438260004 0.8856126013650182 1.045297539325027 1.2880740097196595 1.4358013448555382 1.2963401267888717 0.9922992509084502 0.9113584648102979 1.0 10.265789885385677 -5.239107130701452 22.746561824305452 1.058934729270896 0.8219446450248953 0.13454493214994934 0.17972847230420733 2908.5377339262545 2962337.5945513793 0.026233290951036943 1.5462597769400388 5.766242055972069e-06 5.239107130701452 -0.23699008424600065 NIGS(ph)DFIPR ddPTM_A549_PD325901_60min_R1 2 NIGSDFIPR 9 0 Q5T853;Q5T857;P41279-2;P41279 Q5T853 MAP3K8 Mitogen-activated protein kinase kinase kinase 8 1 NIGS(1)DFIPR;NIGS(1)DFIPR 118.9 0.00015955 23559000.0 2579.1000000000004 2562.5 3104.0 2960.6 3201.5 3361.7 3073.1 3428.6 3557.2 2989.9 3221.1 True False 2840.9283333669296 2778.4508680945323 3314.656105868314 3143.4695379895547 2976.6376845754135 3334.3234297680838 3190.0485021648465 3360.2138833153313 3407.7032544962194 2801.1172037404745 2824.9251202352466 1.0056650043631423 0.983548501230063 1.17336069622698 1.1127620748148472 1.0537049861086345 1.1803227653306494 1.1292506407742213 1.1894877705769094 1.2062986130451634 0.9915721955515799 1.0 11.463996911447609 -5.746968627613733 24.983839822556963 1.1149261678777842 0.9946066713557471 0.3049784034438583 0.07021161658042437 254.82485206208852 439948.7854502341 0.011219404654516993 0.04305818867858284 1.7907352077569927e-06 5.746968627613733 -0.1203194965220371 NIIEATHMYDNAAEACSTTEEVFNS(ph)PR ddPTM_A549_MK2206_60min_R1 4 NIIEATHMYDNAAEACSTTEEVFNSPR 27 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NIIEATHMYDNAAEACSTTEEVFNS(0.999)PR;NIIEATHMYDNAAEACSTTEEVFNS(1)PR;NIIEATHMYDNAAEACSTT(0.001)EEVFNS(0.999)PR;NIIEATHMYDNAAEACSTTEEVFNS(1)PR 179.01 1.5173e-49 57306900.0 7769.84 8621.939999999999 8381.970000000001 7260.860000000001 13193.8 10073.96 9879.72 9594.92 13077.0 11977.0 13472.3 True False 9081.199037650273 9060.759918716727 9570.659384738288 9039.771025952388 11253.009497721177 11139.979760646556 11674.737238832908 10955.029293210135 10115.080379677907 9271.38738161224 10126.756093435588 0.8967530128958995 0.8947346845442574 0.9450863925657521 0.8926620669586571 1.1112156147431709 1.1000541197854825 1.1528605143754533 1.0817905746057668 0.9988470430560434 0.9155337895046353 1.0 13.305884488792028 -6.741714739852765 24.999426555009695 1.0317637423836934 0.9091092115291373 0.523480491171799 0.06443412662258799 181.02117011221745 229428.91276521873 0.009547535169000258 0.01985299446887432 1.8125302363924626e-07 6.741714739852765 -0.12265453085455613 NIIEATHMYDNAAEACSTTEEVFNS(ph)PR ddPTM_A549_PD325901_60min_R1 4 NIIEATHMYDNAAEACSTTEEVFNSPR 27 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NIIEATHMYDNAAEACSTTEEVFNS(1)PR;NIIEATHMYDNAAEACSTTEEVFNS(1)PR;NIIEATHMYDNAAEACSTTEEVFNS(1)PR;NIIEATHMYDNAAEACSTTEEVFNS(1)PR 249.33 9.200399999999997e-125 88780000.0 7162.2 7756.0 8666.7 7676.9 9696.3 9317.4 8469.4 8107.9 8253.199999999999 9526.0 10343.900000000001 True False 7889.301271467035 8409.625339684368 9254.874379100816 8151.0846774951 9015.265338419053 9241.522183574129 8791.707651633511 7946.1815739754975 7906.346705276106 8924.526734282672 9071.665875384613 0.8696640043670646 0.9270210626367258 1.0201956846992488 0.898521262738804 0.9937827806115964 1.0187238276324098 0.9691392708244744 0.8759341099121557 0.8715429794134585 0.9837803614988517 1.0 13.147151789051277 -6.250341063899206 0.0029909140532829556 1.8689017942545396 3.2136388611029605e-08 0.029397041321987394 0.05698742163119003 219288.2766444182 134.5075418609646 41344.21822043723 42710.59985819334 5.618998758006741e-07 6.250341063899206 -1.868901762118151 NIIHGS(ph)DSVK ddPTM_A549_MK2206_60min_R1 2 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.99)DS(0.01)VK;NIIHGS(0.993)DS(0.007)VK 122.64 4.0921e-07 13612000.0 2337.2 2294.7 2038.1 2052.6 2739.0 2471.5 2026.6 2667.9 4177.7 3516.6 3283.4 True False 2731.662220946147 2411.490428543839 2327.1332266800173 2555.487092144716 2336.0967283313594 2733.032489551077 2394.8069872646975 3046.0829951010865 3231.457620416026 2722.1976176152284 2468.0411627700123 1.1068138822612905 0.9770867945481494 0.9429069748853595 1.0354313091263674 0.9465388031492292 1.1073690871847741 0.9703270040183931 1.234210774540854 1.3093207962500883 1.1029790178053445 1.0 11.269150741073624 -8.252292906467954 24.82997439168102 1.1567601668012724 1.0103367112676287 0.39299849956834 0.0891452626052128 663.9471463325918 1802420.9551862723 0.019742575520313332 0.025302075575345043 5.593802047019199e-09 8.252292906467954 -0.14642345553364366 NIIHGS(ph)DSVK ddPTM_A549_PD325901_60min_R1 1 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.556)DS(0.444)VK 108.97 6.9406e-05 20596000.0 3996.5 4110.0 4268.3 5063.0 6133.3 5972.0 4719.8 6360.3 5639.1 5127.2 6261.4 True False 4402.221737932199 4456.364124046254 4557.9725053729835 5375.730011092718 5702.5181667363395 5923.3660120102895 4899.414571773662 6233.4388269411775 5402.108237498486 4803.467716986573 5491.287494284862 0.8016738774857218 0.8115335663420064 0.8300371288366818 0.9789562132173171 1.0384665113001859 1.0786843737784844 0.8922160015975852 1.1351506970685328 0.983759863806222 0.8747434407660958 1.0 12.422928729676078 -6.267097397070129 3.458285384509957 1.0049447774179376 0.8090606702479133 0.5788848915674385 0.06990774845164191 0.09650370727961693 2.4626442475938672 0.007608324783105123 0.020485343475809104 5.406330642523033e-07 6.267097397070129 -0.19588410717002436 NIIHGSDS(ph)VK ddPTM_A549_PD325901_60min_R1 1 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.33)DS(0.67)VK 124.51 6.4299e-06 21928000.0 3781.2 3832.4 4814.5 5362.3 6417.8 6049.8 5462.0 6360.0 6078.8 5778.6 6750.2 True False 4165.064640427682 4155.369797808969 5141.240921940401 5693.517092333103 5967.035868208058 6000.5324346048 5669.859398921082 6233.144810676523 5823.329175596428 5413.738209817955 5919.968193043357 0.7035619963840535 0.7019243452510449 0.8684575244816264 0.9617479193593709 1.0079506635221471 1.0136088977059228 0.9577516658930395 1.0529017399115732 0.9836757539406223 0.9144877190691193 1.0 12.53137370918829 -5.966144200501179 1.872916084753864 0.9963640105233285 0.6871651562327955 0.9088770109666856 0.03461958405101771 0.04579397530717864 0.30224714411973075 0.00325067297190963 0.015185714469176603 1.0810749381446618e-06 5.966144200501179 -0.30919885429053295 NIILGGVK ddPTM_A549_PD325901_60min_R1 1 NIILGGVK 8 0 P22314;Q5JRR9;P22314-2;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 112.17 0.0040425 1106300.0 2363.2 2404.2 2359.9 2670.4 3119.5 2864.7 2526.9 3034.1 2869.9 3033.8 3184.0 False True 2603.1103243041102 2606.810371540633 2520.057005231521 2835.3445430815736 2900.3970816907713 2841.3708329882566 2623.0625622727375 2973.5824952945964 2749.288083346084 2842.2453502484536 2792.3881850389716 0.9322164942005655 0.9335415417911357 0.9024737386920115 1.015383376234276 1.03867975707335 1.0175414894718877 0.9393617178036188 1.0648886538148334 0.9845651468073784 1.017854668443523 1.0 11.447283797019924 -6.264243392983946 24.99833073868946 1.000182308478669 0.9238236849635579 0.5876757835621251 0.0317339245343912 133.965231083185 1194332.2651837806 0.004230290478686486 0.01025966679020422 5.441975810505193e-07 6.264243392983946 -0.07635862351511102 NIINSQEGVVALSTTDIS(ph)PARPK ddPTM_A549_PD325901_60min_R1 1 NIINSQEGVVALSTTDISPARPK 23 1 B4DZ31;Q9NWS1-5;Q9NWS1-2;Q9NWS1 B4DZ31 PARPBP PCNA-interacting partner 1 NIINSQEGVVALS(0.005)T(0.005)T(0.017)DIS(0.973)PARPK 95.652 1.3184000000000002e-07 2914600.0 1137.0 1523.7 1689.1 1698.0 1388.8 1747.1 1552.4 1825.3 1797.1 1615.1 1709.6 True False 1252.4274029848398 1652.1075464256157 1803.7324833834314 1802.8816035622042 1291.2554790999013 1732.8721968491584 1611.4774315058748 1788.8929595798513 1721.574136583592 1513.1223103653092 1499.330038047307 0.8353246924979723 1.101897183743002 1.2030256431949906 1.2024581365089142 0.8612216432224641 1.155764343323643 1.074798336998988 1.1931282067220266 1.1482289375231425 1.0091989568460624 1.0 10.550102274248724 NIKDVQS(ph)PGFLNEPLSSK ddPTM_A549_MK2206_60min_R1 1 NIKDVQSPGFLNEPLSSK 18 1 Q8NG31-4;Q8NG31-2;Q8NG31;E9PPJ1;Q8NG31-3;H0YCZ2 Q8NG31-4 CASC5 Protein CASC5 1 NIKDVQS(1)PGFLNEPLSSK 75.184 0.00013939 2374000.0 2158.6 2240.9 2139.0 2422.4 3445.9 1990.6 1963.5 1940.7 3046.7 3832.1 3405.4 True False 2522.9189072969166 2354.9522383422177 2442.342363901949 3015.8881087456675 2939.0126747561267 2201.24397074666 2320.242534044328 2215.8001681444866 2356.627314580154 2966.4259484909626 2559.7451957413036 0.9856132991261569 0.9199947878641187 0.9541349537310666 1.178198562014398 1.1481661063944246 0.8599465190554557 0.9064349599735783 0.865633099665918 0.9206491796530839 1.1588754823824892 1.0 11.321784492099853 -7.27400833729834 24.98866582790557 0.9424957739857207 1.0339250850328947 0.13810277731293186 0.10452197939087755 988.4883441220868 1965235.3393463837 0.013773127326036866 0.022109436792590247 5.320980443022744e-08 7.27400833729834 0.091429311047174 NIKDVQS(ph)PGFLNEPLSSK ddPTM_A549_PD325901_60min_R1 2 NIKDVQSPGFLNEPLSSK 18 1 Q8NG31-4;Q8NG31-2;Q8NG31;E9PPJ1;Q8NG31-3;H0YCZ2 Q8NG31-4 CASC5 Protein CASC5 1 NIKDVQS(1)PGFLNEPLSSK;NIKDVQS(1)PGFLNEPLSSK 123.43 6.475e-16 6347500.0 4174.9 4055.3 4127.4 4364.3 5479.3 5613.1 5497.2 4962.1 4764.6 5961.6 6281.5 True False 4598.732774601062 4397.054363076591 4407.510184072451 4633.87289895555 5094.452870558822 5567.388774617373 5706.398954183265 4863.127022807856 4564.360431342818 5585.183558586977 5508.915321709261 0.8347800802961345 0.7981706209476295 0.800068602743548 0.8411588540296877 0.924765143962706 1.0106143314052556 1.035848006538741 0.8827739652565516 0.8285406772102327 1.013844510656601 1.0 12.427552571872765 -6.685385784118702 3.6140477580027084 0.9310823855793126 0.8112753248351571 0.5112921781340101 0.062273123386387325 0.2105917369384299 5.436497651826816 0.01116146225991333 0.0239994201326741 2.063546291678747e-07 6.685385784118702 -0.11980706074415548 NILGGTVFR ddPTM_A549_PD325901_60min_R1 2 NILGGTVFR 9 0 P48735-2;P48735;C9J4N6;O75874 P48735-2 IDH2;IDH1 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] cytoplasmic 0 ; 85.676 0.0034743 4202700.0 2391.1000000000004 2425.7 2288.9 2484.0 3356.7 2697.6000000000004 2894.8999999999996 2703.2 3054.3 2777.2 3128.3 False True 2633.8427117652154 2630.122251994889 2444.238518273837 2637.4310384266887 3120.936971986347 2675.6316399864313 3005.0670036500646 2649.2825553806256 2925.9383926143587 2601.847118040083 2743.53893192758 0.9600165250488014 0.958660444503696 0.8909071746091616 0.9613244440361044 1.1375588425835137 0.9752482856536547 1.0953250812951787 0.9656442358261959 1.0664832776980595 0.948354363687507 1.0 11.421822333041527 -6.541717902880761 24.990397873780765 1.034317215306087 0.9366370164507697 0.33931145725360423 0.05665742333727587 152.85710551293715 202766.5317415614 0.006772980820922515 0.014100723423883183 2.872645910826625e-07 6.541717902880761 -0.0976801988553172 NILVQTPESES(ph)PQSHR ddPTM_A549_MK2206_60min_R1 1 NILVQTPESESPQSHR 16 0 Q9C026-5;Q9C026;Q9C026-4 Q9C026-5 TRIM9 E3 ubiquitin-protein ligase TRIM9 1 NILVQTPES(0.054)ES(0.861)PQS(0.085)HR 104.45 2.9776e-07 7507600.0 1509.9 1907.6 1768.1 1144.2 2115.9 1357.4 1389.4 1247.1 2545.4 2237.4 2439.3 True False 1764.7342064892114 2004.6886919816222 2018.8431667204463 1424.5290513650896 1804.6539129157804 1501.0391670308031 1641.8359953150957 1423.8802440835727 1968.87096416855 1731.9697860582137 1833.554488744864 0.9624661919358815 1.0933346700560318 1.101054361412744 0.7769221259086947 0.9842379509272903 0.8186498826431495 0.895438889541261 0.7765682737131371 1.0738000840740298 0.9445968454658858 1.0 10.840427424708901 NILVQTPESES(ph)PQSHR ddPTM_A549_PD325901_60min_R1 2 NILVQTPESESPQSHR 16 0 Q9C026-5;Q9C026;Q9C026-4 Q9C026-5 TRIM9 E3 ubiquitin-protein ligase TRIM9 1 NILVQTPES(0.039)ES(0.936)PQS(0.025)HR;NILVQTPES(0.125)ES(0.825)PQS(0.05)HR 135.04 7.7058e-11 23339000.0 4304.2 4338.3 5730.700000000001 4887.1 5844.3 5698.2 4994.8 5392.700000000001 6446.9 5606.2 6147.9 True False 4741.1592154154305 4703.9037662651735 6119.619763498569 5188.965067590607 5433.81652974046 5651.795748432189 5184.879847259436 5285.138368008695 6175.959212698661 5252.223575239919 5391.747274749086 0.8793363215704632 0.8724266043207817 1.1349975159552255 0.9623902611110579 1.0078025272416598 1.0482308350951417 0.961632580878102 0.9802273917326082 1.1454467166186066 0.974122730091117 1.0 12.396537159889004 -3.7921646433547864 0.5412525735287691 1.0539586751823316 4.2851908893307966e-13 0.2035328061201246 0.07439896519795583 13.066824184019117 0.7604985962657758 0.014148966653043944 12.482999303514827 0.00016137466608798096 3.7921646433547864 -1.053958675181903 NIMTQQKDS(ph)FEMEEVQSTEGEAPHVPATYQLGLTK ddPTM_A549_PD325901_60min_R1 1 NIMTQQKDSFEMEEVQSTEGEAPHVPATYQLGLTK 35 1 E9PHV5;P28290-3;P28290;P28290-2 E9PHV5 SSFA2 Sperm-specific antigen 2 1 NIMT(0.054)QQKDS(0.313)FEMEEVQS(0.313)T(0.313)EGEAPHVPAT(0.003)Y(0.003)QLGLTK 45.856 0.0031434 4358600.0 680.24 365.92 397.02 701.39 946.28 906.6 786.42 921.32 1100.7 1084.7 776.61 True False 749.297464033779 396.75736259635175 423.9641646752058 744.713267327735 879.8165572887774 899.2169501822718 816.3476434455362 902.9435498384421 1054.4414067873577 1016.2118568839395 681.0918933364052 1.1001415100732754 0.5825313243016169 0.6224771852713878 1.0934108519184884 1.2917736444914902 1.320257896151658 1.198586639236837 1.325729404023988 1.548163202504229 1.4920334052221815 1.0 9.411705650445013 -6.455974067350247 3.896892105674662 1.2702503499073057 0.753094056900767 0.6147498437739751 0.18581290814985993 0.1440808380754192 4.253042131103287 0.031864991030123024 0.07605624348236571 3.4996606362450793e-07 6.455974067350247 -0.5171562930065386 NINDDFEMIDCDLEDAT(ph)KTPDCSSGPVKEER ddPTM_A549_PD325901_60min_R1 1 NINDDFEMIDCDLEDATKTPDCSSGPVKEER 31 2 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 NINDDFEMIDCDLEDAT(0.499)KT(0.499)PDCS(0.001)S(0.001)GPVKEER 93.225 1.1019e-09 4634800.0 993.9 916.62 1015.6 671.75 652.74 589.11 917.24 796.9 600.73 995.8 905.76 True False 1094.7999963294917 993.8667842781697 1084.524723298925 713.2424718450591 606.8937942307527 584.3124834787983 952.1460701329873 781.0052043440435 575.483407194848 932.9250180557084 794.3572620857091 1.3782211714851367 1.2511584292294593 1.3652858418532436 0.8978862608649534 0.7640061005261767 0.7355789534102006 1.1986370812963667 0.9831913694518161 0.7244642110828401 1.1744400946321911 1.0 9.633644195023152 -6.266202282755199 23.508700518838705 0.8832083512612571 1.323515504258478 0.5354903859192246 0.15935662971445355 82.03697265545073 404920.99245816853 0.02127657750805834 0.05103871816057506 5.417484996647632e-07 6.266202282755199 0.440307152997221 NINDDFEMIDCDLEDATKT(ph)PDCSSGPVKEER ddPTM_A549_PD325901_60min_R1 1 NINDDFEMIDCDLEDATKTPDCSSGPVKEER 31 2 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 NINDDFEMIDCDLEDAT(0.146)KT(0.843)PDCS(0.005)S(0.006)GPVKEER 120.82 1.9462e-21 5669300.0 845.32 1236.8 1194.4 1468.6 1021.7 851.53 962.2 1284.5 584.62 1119.1 981.09 True False 931.1362641083069 1341.029476549977 1275.4591665106695 1559.3120865674055 949.9393166736526 844.5954220038718 998.8170475360433 1258.8796398292438 560.0504544708137 1048.439835013199 860.4221496419229 1.0821853720244332 1.558571542013494 1.4823644033820726 1.8122639999636638 1.1040386594754488 0.9816058574914214 1.1608453454524799 1.4630953426212292 0.6509019493557747 1.2185179512748738 1.0 9.748900853967648 -7.7642437015571195 0.7662225030539758 0.8557614914133689 1.4597083504232273 0.15416271163948014 0.28516902958111257 0.43535652356761134 0.5158755163677038 0.05784375587666644 0.106705960882288 1.7209026305444598e-08 7.7642437015571195 0.6039468590098584 NINMDNDLEVLTSS(ph)PTR ddPTM_A549_MK2206_60min_R1 4 NINMDNDLEVLTSSPTR 17 0 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 NINMDNDLEVLT(0.035)S(0.112)S(0.843)PT(0.01)R;NINMDNDLEVLT(0.009)S(0.04)S(0.823)PT(0.129)R;NINMDNDLEVLT(0.001)S(0.037)S(0.898)PT(0.064)R;NINMDNDLEVLT(0.011)S(0.048)S(0.941)PTR 302.26 1.5849999999999996e-151 32691100.0 6576.1 7430.6 7661.599999999999 6699.3 10839.2 7525.2 7670.6 6906.3 11386.2 10002.6 10909.099999999999 True False 7685.984909791185 7808.78580134129 8748.130086615785 8340.628800743008 9244.76803860142 8321.51166917652 9064.248730145366 7885.289174656707 8807.243880025128 7743.005712892594 8200.069394156766 0.9373073007489535 0.9522828924967027 1.0668361041980399 1.0171412459858453 1.1274011955544045 1.0148099082071538 1.1053868320436897 0.9616124932156834 1.0740450423872052 0.944260998377664 1.0 13.00142040343942 -5.712315825419674 7.454323480383059 1.0406267284095885 0.9433892944568933 0.28689442626885475 0.05395884600469939 0.16596050489567013 20.62278573145888 0.006113275455181801 0.023729374942228678 1.9394749495430615e-06 5.712315825419674 -0.09723743395269513 NINMDNDLEVLTSS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 NINMDNDLEVLTSSPTR 17 0 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 NINMDNDLEVLT(0.003)S(0.045)S(0.95)PT(0.002)R;NINMDNDLEVLTS(0.01)S(0.989)PT(0.001)R;NINMDNDLEVLTS(0.015)S(0.837)PT(0.147)R;NINMDNDLEVLTS(0.139)S(0.861)PT(0.001)R 272.31 2.1898999999999992e-100 105355000.0 8817.099999999999 8081.3 8690.400000000001 8237.3 9388.8 10409.399999999998 9075.7 10576.3 10053.1 10461.8 10123.6 True False 9712.20550119404 8762.339512324812 9280.18280362049 8746.099312734365 8729.363077601638 10324.629297625566 9421.080729913598 10365.347399553159 9630.603167596968 9801.240162578044 8878.46137878785 1.0939063748588405 0.9869209470527773 1.0452467390118316 0.9850917788109412 0.9832067410303285 1.1628849703950797 1.0611163723054715 1.1674711368703738 1.0847153303618702 1.103934538251737 1.0 13.116093966471505 NINPSTANS(ph)PK ddPTM_A549_MK2206_60min_R1 2 NINPSTANSPK 11 0 P46937-6;P46937-7;P46937;P46937-9;H0YCI3;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 NINPSTANS(1)PK;NINPSTANS(1)PK 148.68 1.3603e-11 15209900.0 6747.7 7437.299999999999 7773.4 8222.0 10247.2 7945.5 7907.3 8251.1 10916.5 10419.599999999999 9989.599999999999 True False 7886.546794573981 7815.826802723274 8875.785007739783 10236.39036909961 8739.850454383759 8786.287536203958 9343.954056250936 9420.718692933979 8443.93018006835 8065.8051232735115 7508.9066210657575 1.0502922985416783 1.0408741508113142 1.1820342768465566 1.3632331424101176 1.1639311680697517 1.1701154348563332 1.2443827747220972 1.2546059191233987 1.12452193191209 1.0741650589508478 1.0 12.874387135516825 -9.761586232536592 0.9382776602461671 1.0182653589816977 1.1835323775009399 0.26742380146149836 0.08852211727582088 0.40132623114126564 0.7321851316112944 0.031245908210689288 0.018745806958895238 1.731465200776028e-10 9.761586232536592 0.1652670185192422 NINPSTANS(ph)PK ddPTM_A549_PD325901_60min_R1 2 NINPSTANSPK 11 0 P46937-6;P46937-7;P46937;P46937-9;H0YCI3;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 NINPST(0.003)ANS(0.997)PK;NINPST(0.001)ANS(0.999)PK 127.71 3.2609000000000003e-13 14077000.0 5212.9 5149.1 6399.3 5820.4 7572.4 6304.5 6701.9 7442.6 6787.9 6043.7 6747.4 True False 5742.109770465844 5583.032727768025 6833.594980116984 6179.912888912518 7040.540747361822 6253.158242250317 6956.944471920399 7294.151504393251 6502.628168558104 5662.099750575709 5917.512575292695 0.9703586933538244 0.9434762760080615 1.1548086959120618 1.0443430090398826 1.1897804453780276 1.0567207357292383 1.1756535171496938 1.2326381079185902 1.098878639600773 0.9568378061783244 1.0 12.530775151493229 -5.744541117018125 24.99600766355329 1.08401308166174 0.9569173894912995 0.3011930411804158 0.08136270739688792 253.68399645922491 375244.59008795035 0.01142456807550838 0.0440091953082048 1.800772637441921e-06 5.744541117018125 -0.12709569217044048 NINTFVET(ph)PVQK ddPTM_A549_PD325901_60min_R1 2 NINTFVETPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NINTFVET(1)PVQK;NINTFVET(1)PVQK 162.97 3.88e-14 14995800.0 5957.5 6638.0 7156.200000000001 7007.8 8457.2 7313.299999999999 7591.6 7223.200000000001 7244.1 7480.4 8610.6 True False 6562.301014320302 7197.407556063029 7641.862765726436 7440.6558901314565 7863.195447756114 7253.74290951689 7880.502492282918 7079.12760950922 6939.655669036339 7008.086267386953 7551.550787090629 0.8690004476350145 0.9531032444841652 1.011959394988139 0.9853149505199983 1.0412689617605753 0.960563348380992 1.0435608147871602 0.9374402436134025 0.9189709325533075 0.9280327266509645 1.0 12.882557231497422 -5.2979368532950595 3.668239961392388 0.9743499142552441 0.8611753126976415 0.37673242915296135 0.04077780129005722 0.218065189175295 5.298345667617455 0.006061013690239095 0.06279129133566631 5.035738234320718e-06 5.2979368532950595 -0.11317460155760262 NIPS(ph)PGQLDPDTR ddPTM_A549_MK2206_60min_R1 2 NIPSPGQLDPDTR 13 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 NIPS(0.806)PGQLDPDT(0.194)R;NIPS(0.975)PGQLDPDT(0.025)R 63.181000000000004 0.0038029000000000006 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NIPS(ph)PGQLDPDTR ddPTM_A549_PD325901_60min_R1 2 NIPSPGQLDPDTR 13 0 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 NIPS(1)PGQLDPDTR;NIPS(1)PGQLDPDTR 176.56 8.808299999999999e-52 11531000.0 2203.6 2555.0 2660.9 2324.2 3138.2 2365.4 2440.6 3591.7 2706.3 2539.7 3040.7 True False 2427.3078497954207 2770.3188167732787 2841.4846752915587 2467.7605553588182 2917.7836582022687 2346.136966645872 2533.478368547563 3520.06072586586 2592.5636224117593 2379.3429085720877 2666.7131765854256 0.9102245682467622 1.038851437453995 1.0655381689492074 0.9253940682584564 1.0941497885191855 0.8797860179511193 0.9500378183871795 1.3199997497942757 0.9721944021484116 0.8922380289951921 1.0 11.380846946082432 NIPS(ph)PGQLDPDTRIPVINLEDGTR ddPTM_A549_MK2206_60min_R1 1 NIPSPGQLDPDTRIPVINLEDGTR 24 1 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 NIPS(0.906)PGQLDPDT(0.094)RIPVINLEDGTR 60.541000000000004 0.00012531 5992500.0 759.55 1325.1 762.92 1179.1 1289.2 1197.7 1238.1 1278.8 1042.2 1738.6 1584.0 True False 887.7434707854042 1392.5419300402853 871.1135279420633 1467.9795529318098 1099.5603877929134 1324.4398190310844 1463.0467437740172 1460.0738161607503 806.1433640514117 1345.8490524898584 1190.6490838239934 0.7455962322116346 1.169565364773872 0.7316291086743363 1.2329237664359658 0.9234966059533415 1.112367898337768 1.2287808084269192 1.226283911857093 0.6770620957959592 1.1303490430340828 1.0 10.217532559640356 -8.762379524213138 24.999988137293805 0.8475015547854531 1.05035647877666 0.006805732547233712 0.20383600879858849 31.608216074657737 840508.9563185005 0.03348990991928023 0.036666140951792846 1.7283053558590681e-09 8.762379524213138 0.20285492399120686 NIPSPGQLDPDT(ph)RIPVINLEDGTR ddPTM_A549_PD325901_60min_R1 1 NIPSPGQLDPDTRIPVINLEDGTR 24 1 Q9P2D1 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 NIPS(0.275)PGQLDPDT(0.725)RIPVINLEDGTR 93.596 7.3373e-08 10191000.0 2189.2 2071.9 2354.0 2666.2 2929.8 3073.2 2937.7 2892.7 2311.3 2917.7 2680.7 True False 2411.4459723961395 2246.5062843336827 2513.756595751939 2830.885118620463 2724.020955261297 3048.1728781162133 3049.495781071123 2835.002829220748 2214.1640987622586 2733.4759240622034 2350.9908943574023 1.0257147223257372 0.955557203443666 1.0692328080832596 1.2041242377479435 1.1586692920841173 1.296548142926505 1.2971108430875669 1.2058757165010803 0.9418003719522944 1.1626909872865951 1.0 11.19905323594955 -8.76551154446956 24.993472362306534 0.9725168332509347 1.1539913848149328 0.10945570505770941 0.11556693730512993 84.2011793561826 516794.7879890494 0.01956763123204982 0.021204129938405744 1.7158860976185763e-09 8.76551154446956 0.18147455156399805 NIS(ph)ALKR ddPTM_A549_PD325901_60min_R1 1 NISALKR 7 1 Q66K14-2;Q66K14;H0YB58 Q66K14-2 TBC1D9B TBC1 domain family member 9B 1 NIS(1)ALKR 54.066 0.018139 9391500.0 2210.1 2101.1 2187.3 2212.8 3255.6 2455.7 2553.4 2522.9 2494.0 1956.2 2242.5 True False 2434.467725010371 2278.167070811091 2335.743331303405 2349.479630366575 3026.937887210283 2435.701593384741 2650.571034274094 2472.5787803232383 2389.1858531186244 1832.6851981528196 1966.6867163787356 1.2378523253022025 1.1583782266073799 1.1876539928048195 1.194638480445262 1.539105268776 1.2384797096049966 1.3477342436901165 1.2572306304463188 1.2148278794081842 0.9318643294277935 1.0 10.941551446282899 -10.105984592416993 0.7010297295050313 1.0057307529468378 1.270584954421691 0.5496671801377402 0.10237038399378738 0.4389766994061523 0.42088795350868574 0.05854172551918494 0.02185961886993594 7.834574372049516e-11 10.105984592416993 0.26485420147485317 NIS(ph)PGLQNGEKEDR ddPTM_A549_PD325901_60min_R1 2 NISPGLQNGEKEDR 14 1 Q9Y2I7 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 NIS(1)PGLQNGEKEDR;NIS(1)PGLQNGEKEDR 174.02 2.7948e-23 44788000.0 12071.599999999999 13302.4 12886.3 15326.5 16645.5 15509.8 15393.7 16947.3 17813.9 15272.1 15563.6 True False 13297.099945357766 14423.43993277686 13760.841809616904 16273.183095993005 15476.377503857582 15383.493331057796 15979.515677255868 16609.27280660035 17065.243732505947 14307.816999647115 13649.375865789105 0.9741910601704298 1.0567105832969166 1.0081663766111957 1.192229099411075 1.1338523941338363 1.12704738167663 1.1707140190422216 1.2168521821008647 1.2502581729966422 1.048239651419398 1.0 13.736547363228105 -6.24676841034005 23.95615086958435 1.1370571125256208 1.0173914407938995 0.40316856374082044 0.06983064104243751 533.3221849565779 870855.0504975657 0.013320360675483384 0.035049672221350366 5.66541319435402e-07 6.24676841034005 -0.11966567173172127 NISKLS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 NISKLSPPR 9 1 Q6P0N0;G5E9K5;Q6P0N0-2;H7C1S6 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 NIS(0.081)KLS(0.919)PPR;NIS(0.003)KLS(0.997)PPR 78.903 0.00050071 28729000.0 6463.6 8797.5 9231.5 8524.9 11998.900000000001 9346.7 8527.0 9842.2 13504.2 11803.9 11525.9 True False 7554.497660152112 9245.255172839336 10540.665513025173 10613.50088269731 10233.87770484672 10335.761590162681 10076.245524724209 11237.361990473371 10445.520261776124 9137.39079183541 8663.700931342779 0.8719711956840652 1.067125382801784 1.2166469729918856 1.2250539309708528 1.1812362621871553 1.1929961193340444 1.1630417075306985 1.2970625463097216 1.205664916708659 1.0546752322415653 1.0 13.080767727017884 -2.108320189653945 18.398175109109744 1.1278019672987152 0.005635231804130836 0.0 0.11724969332420132 0.0 0.0 0.016837271598756406 0.0 0.007792553818052475 2.108320189653945 -1.1221667354945843 NISKLS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 NISKLSPPR 9 1 Q6P0N0;G5E9K5;Q6P0N0-2;H7C1S6 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 NIS(0.002)KLS(0.998)PPR;NIS(0.005)KLS(0.995)PPR 76.165 0.00056174 57090000.0 10679.400000000001 9536.5 10650.099999999999 10801.8 13339.6 13894.2 12263.5 11644.400000000001 12054.2 13285.2 11702.4 True False 11763.564826241249 10340.174323349662 11372.879830253914 11469.002653332287 12402.672515121716 13781.050241807334 12730.1942033447 11412.14330714492 11547.603893609663 12446.370204733581 10263.078987625637 1.1462023083350301 1.0075119109788573 1.108135272462229 1.1175011580014782 1.2084748183343246 1.3427793217243453 1.2403874333125278 1.1119609739830247 1.125159799270063 1.2127325746728028 1.0 13.32517599293028 -10.0070590579999 0.7874608379266023 1.0096699769274475 1.159685217038283 0.0 0.10132266263783843 0.5626584000933647 0.7040854106735138 0.04214685141922146 0.018852324327004035 9.838773030556947e-11 10.0070590579999 0.15001524011083545 NISS(ph)SPSVESLPGGR ddPTM_A549_MK2206_60min_R1 1 NISSSPSVESLPGGR 15 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 NIS(0.001)S(0.5)S(0.5)PSVESLPGGR 206.43 2.4061999999999998e-39 23485000.0 1589.5 1870.2 2010.8 1996.2 2949.8 2323.9 2124.8 2861.4 3759.4 3514.7 3952.7 True False 1857.7687404560588 1965.3851917299382 2295.961676172996 2485.269089612823 2515.8883275764306 2569.813555520026 2510.848656143308 3267.012212669983 2907.9019025281877 2720.726828934838 2971.135501029733 0.6252723040777491 0.661492951448622 0.7727556267215897 0.8364711366248632 0.8467767042952019 0.8649264076409113 0.8450804937281051 1.0995837152286407 0.9787173629477249 0.9157195382007625 1.0 11.536798686606165 -5.767407874348209 0.38353850476530854 1.0047514260212096 0.42754159567055194 0.8012675499895401 0.05969951574702104 1.0457689590855852 0.13387226929196896 0.014745911996081457 0.25857621388344326 1.708410081790913e-06 5.767407874348209 -0.5772098303506576 NISS(ph)SPSVESLPGGR ddPTM_A549_PD325901_60min_R1 1 NISSSPSVESLPGGR 15 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 NIS(0.053)S(0.473)S(0.473)PS(0.001)VESLPGGR 200.96 1.2261e-38 46362000.0 9161.0 10219.0 9272.8 9800.3 12272.0 10416.0 11048.0 10752.0 10783.0 10733.0 11323.0 True False 10091.017976028239 11080.190993583616 9902.107969876193 10405.642272903815 11410.057056101663 10331.175549413789 11468.437685697565 10537.54292521917 10329.828008892588 10055.31654829476 9930.34278241089 1.0161802263162503 1.11579139173417 0.9971567132018134 1.0478633518406635 1.1490093852864491 1.0403644441874529 1.1548883998255353 1.0611459398847523 1.0402287448917964 1.0125850404786862 1.0 13.277627803216232 -9.267807669859424 1.240176756460238 1.0108799177579506 1.0743886754606002 0.21568996513978012 0.048231358883181794 0.4000579986379419 1.2793547850038611 0.010931804421035925 0.00934449273807607 5.397496012217496e-10 9.267807669859424 0.06350875770264963 NISSS(ph)PSVESLPGGR ddPTM_A549_MK2206_60min_R1 1 NISSSPSVESLPGGR 15 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 NIS(0.007)S(0.078)S(0.915)PSVESLPGGR 270.79 6.993499999999999e-91 23753000.0 2772.0 2560.6 3769.5 3492.7 6095.1 4768.9 5867.8 5738.0 8607.7 6858.6 7665.1 True False 3239.84583110676 2690.923602793111 4304.071781546699 4348.411656793261 5198.518864130148 5273.54183266038 6933.9033059665435 6551.37907188801 6658.069693672366 5309.237496495428 5761.644124002076 0.5623127290368538 0.4670409252774151 0.7470214558404663 0.7547171542023018 0.9022630957844066 0.9152841999893154 1.2034591440802507 1.1370676374467534 1.1555850292689767 0.9214795954470713 1.0 12.492264837837219 -6.574150268603517 0.8825400585698381 1.087455696164593 0.5042936333001169 0.8278875735097265 0.094328792355207 0.18407016303689538 0.2516958826711508 0.015029070194592355 0.06658124856980932 2.665936074385462e-07 6.574150268603517 -0.583162062864476 down NISSS(ph)PSVESLPGGR ddPTM_A549_PD325901_60min_R1 1 NISSSPSVESLPGGR 15 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 NIS(0.097)S(0.329)S(0.571)PS(0.003)VESLPGGR 205.45 4.1864999999999995e-39 61422000.0 7223.0 5811.7 6004.9 6436.4 7781.3 6462.0 6612.2 6713.7 6103.6 6736.9 7325.0 True False 7956.273642708434 6301.472355162926 6412.428624397115 6833.961809875013 7234.768332027695 6409.375614469271 6863.83088933467 6579.789986704241 5847.086917840748 6311.530984273452 6424.071437000768 1.238509521684742 0.9809156727100344 0.9981876271585969 1.0638053883575138 1.126196743448018 0.9977123818320491 1.0684549442898497 1.0242398533750074 0.9101839814799135 0.9824814443875708 1.0 12.649272220673247 -8.566412297212501 5.673186029640834 0.9576920245459776 1.0602318477760295 0.2864719775038922 0.07068585865403221 0.17176577306169818 13.390945496148927 0.011872284587050645 0.013548788999639294 2.713861642534877e-09 8.566412297212501 0.10253982323005195 NITSSS(ph)PER ddPTM_A549_MK2206_60min_R1 2 NITSSSPER 9 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 NITS(0.001)S(0.005)S(0.993)PER;NITS(0.002)S(0.02)S(0.978)PER 125.54 7.2851e-05 131211000.0 3256.0 3746.9 3305.2 3288.1 4843.299999999999 3601.0 3452.8 3761.6000000000004 5763.700000000001 4602.200000000001 4798.1 True False 3805.5331984428612 3937.601205696132 3773.9270599199253 4093.6846476084193 4130.856985880715 3982.0554298496545 4080.129066232877 4294.81831941686 4458.231152737599 3562.559823633285 3606.599349176705 1.0551582890158198 1.0917767194171393 1.0463948707752684 1.1350538973903224 1.1453606530549851 1.1041025199426868 1.1312953481135262 1.1908221301035995 1.236131524771472 0.9877891827509276 1.0 11.816423450216138 -6.267787843191521 23.573989805324754 1.1239616392610114 1.0671766349508272 0.09191311054514184 0.06952595796825961 479.46278371389457 1780421.1495312597 0.012196162905911925 0.029042467763710618 5.397742427514443e-07 6.267787843191521 -0.056785004310184295 NITSSS(ph)PER ddPTM_A549_PD325901_60min_R1 2 NITSSSPER 9 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 NIT(0.001)S(0.005)S(0.038)S(0.956)PER;NIT(0.025)S(0.072)S(0.43)S(0.473)PER 96.009 0.0009035 194431000.0 6320.5 7500.7 6001.0 5998.6 7206.1 6686.3 5549.1 6681.3 8177.200000000001 7607.7 7976.8 True False 6962.152507093822 8132.810312708942 6408.263946944512 6369.119898190953 6699.968395695418 6631.848989635698 5760.2740370840365 6548.036230121543 7833.540720978992 7127.348523661792 6995.704169101396 0.9952039621464035 1.1625434861339496 0.916028435743254 0.9104329949116576 0.9577260892888835 0.9479887698692617 0.8234016044483409 0.9360081661318511 1.119764434233533 1.0188178847158578 1.0 12.772253567232937 -8.745339818457392 24.970381975039356 1.056555430442887 0.955537386417186 0.1888826009524901 0.08231943713513279 277.72580769495437 430751.86920693045 0.015364048266887101 0.017393844593548105 1.797463919479138e-09 8.745339818457392 -0.10101804402570103 NIVEAAAVR ddPTM_A549_MK2206_60min_R1 1 NIVEAAAVR 9 0 P62854;Q5JNZ5 P62854 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 0 87.30799999999999 0.0031874000000000004 6611700.0 1352.8 1696.9 1298.1 1435.4 1978.5 1688.2 1544.9 1784.0 2318.2 1922.4 2002.0 False True 1581.1195672154481 1783.2649619540869 1482.1900993834124 1787.0730644375542 1687.4652709031027 1866.844203463536 1825.5883324904923 2036.8874632708635 1793.1314014047039 1488.1285048352145 1504.8481476108789 1.0506837980467723 1.1850132286006578 0.9849432992535235 1.1875437845836738 1.121352525556914 1.2405532122476064 1.2131379072292614 1.3535501681712263 1.1915696638571196 0.9888894817711615 1.0 10.555402198396738 -4.323758298496766 16.322066730273242 1.128598262443144 1.1261496839527017 0.0 0.11430533750937176 0.0 0.0 0.015921905338553526 0.0 4.745059925364828e-05 4.323758298496766 -0.0024485784904424435 NIYAFMGT(ph)PVQK ddPTM_A549_MK2206_60min_R1 4 NIYAFMGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NIYAFMGT(1)PVQK;NIY(0.001)AFMGT(0.999)PVQK;NIYAFMGT(1)PVQK;NIYAFMGT(1)PVQK 142.91 1.0388000000000001e-11 20931700.0 9338.9 12814.400000000001 13070.800000000001 11852.600000000002 18315.7 14651.3 13935.400000000001 12901.7 19884.8 18347.800000000003 17776.6 True False 10915.078005816351 13466.598225272224 14924.43598414661 14756.48753208343 15621.484792661086 16201.690841254163 16467.281797260675 14730.55548479915 15380.924549500594 14203.019236899485 13362.179610798987 0.8168635899037797 1.0078144896652077 1.1169162830355197 1.1043473416685403 1.1690820844853922 1.2125035969551219 1.232379916817779 1.102406636780595 1.151079015362891 1.0629268315942222 1.0 13.705867735955245 -5.329703520732579 2.2078446235987186 1.1060117605359359 0.7653698436340503 0.6561216128814512 0.06532920008759985 0.3385590927215639 2.0862632356203883 0.011853564033184813 0.21181889890647115 4.680545584631329e-06 5.329703520732579 -0.3406419169018856 NIYAFMGT(ph)PVQK ddPTM_A549_PD325901_60min_R1 4 NIYAFMGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NIYAFMGT(1)PVQK;NIYAFMGT(1)PVQK;NIYAFMGT(1)PVQK;NIYAFMGT(1)PVQK 157.5 8.430399999999999e-14 48302500.0 15860.0 14116.399999999998 18550.5 17799.0 21848.9 21415.4 21505.6 21369.9 21477.5 19669.6 20894.6 True False 17470.095524485096 15306.038569510098 19809.44848321848 18898.40380553809 20314.30863861307 21241.000082653238 22324.007376315858 20943.660580137766 20574.875365018146 18427.65809916505 18324.69666178244 0.9533634224309054 0.8352683185982562 1.0810246329770141 1.0313078657914245 1.108575438576297 1.1591460679921088 1.2182470350450214 1.1429199056712014 1.1227948677550896 1.0056187253346107 1.0 14.161501696426175 -5.773502462147244 24.698631769331474 1.084902797188585 0.8943158884594058 0.5582953954242902 0.06876182890545306 107.17287145158514 219433.65184366866 0.01089343757139976 0.034250511216152676 1.6846028762219283e-06 5.773502462147244 -0.19058690872917916 NIYS(ph)EELR ddPTM_A549_MK2206_60min_R1 2 NIYSEELR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 1 NIY(0.001)S(0.999)EELR;NIY(0.001)S(0.999)EELR 66.19 0.0085963 13682600.0 1140.48 1286.78 1288.8400000000001 1005.26 1540.94 1412.68 889.5699999999999 1348.22 2075.67 1663.23 1716.8000000000002 True False 1332.9651419410666 1352.2716057182377 1471.6168921418362 1251.5487451278368 1314.2697672708755 1562.1688599389104 1051.1933542194108 1539.3343137505842 1605.5340591638778 1287.5051878365969 1290.4711787304493 1.0329290292654365 1.0478898157559682 1.1403717621881304 0.9698385874522948 1.0184417822983376 1.2105414562421721 0.8145810395033872 1.1928467207341769 1.2441456156683668 0.9977016217465854 1.0 10.333682205429906 NIYS(ph)EELR ddPTM_A549_PD325901_60min_R1 2 NIYSEELR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 1 NIYS(1)EELR;NIYS(1)EELR 81.017 0.0038008000000000004 16842100.0 3787.5 3484.7 3569.4 4696.700000000001 4087.7 5481.9 4512.6 4519.7 4342.2 4342.2 5668.1 True False 4172.004211789866 3778.3678985557126 3811.640948545864 4986.804492020381 3800.594053799445 5437.257223918149 4684.329462389471 4429.551037863941 4159.71243440725 4068.03275095551 4970.959633046287 0.8392754155666301 0.760088227922355 0.7667817141798084 1.0031874849412896 0.7645594280294683 1.09380434066935 0.9423390669376318 0.8910856987083272 0.8368026983671377 0.8183596430580048 1.0 12.27930867250499 -6.245755583164014 24.639883311405963 0.9256993782403279 0.7858524134577909 0.287293246394995 0.09071999148659045 620.8462514159099 975372.4224915253 0.01241649803150367 0.032720291971799 5.678641040535412e-07 6.245755583164014 -0.139846964782537 NIYSDIPPQVPVRPIS(ph)YTPSIPSDSR ddPTM_A549_PD325901_60min_R1 3 NIYSDIPPQVPVRPISYTPSIPSDSR 26 1 H0Y9H4;A0A087WVP1;Q14517 H0Y9H4 FAT1 Protocadherin Fat 1;Protocadherin Fat 1, nuclear form 1 NIY(0.001)S(0.002)DIPPQVPVRPIS(0.434)Y(0.031)T(0.434)PS(0.09)IPS(0.006)DS(0.002)R;NIYSDIPPQVPVRPIS(0.769)YT(0.208)PS(0.022)IPS(0.001)DSR;NIYSDIPPQVPVRPIS(0.451)YT(0.451)PS(0.077)IPS(0.016)DS(0.004)R 109.62 5.837699999999999e-13 18289200.0 6400.16 6885.9 6153.9 7031.7 7847.6 7505.7 7488.11 6954.32 8104.299999999999 7803.200000000001 8268.4 True False 7049.899531651229 7466.198959068147 6571.540660406902 7466.032138850618 7296.4116487502815 7444.576067706901 7773.074123701013 6815.610632041501 7763.704454462417 7310.504620297562 7251.4392177060945 0.9722069398909449 1.0296161541060243 0.9062395013062979 1.0295931489876582 1.0062018627880622 1.0266342782725417 1.0719353621169745 0.9398976434084402 1.0706432504468224 1.008145335128404 1.0 12.82405164478047 -6.402903397966158 20.623230215606316 1.0274885883355316 0.9741281778728297 0.18687592890352012 0.043474489740860926 5.594196567903592 942.6866588228636 0.0060852309016756105 0.01414082004156233 3.9545457298777443e-07 6.402903397966158 -0.0533604104627019 NIYSEELR ddPTM_A549_MK2206_60min_R1 1 NIYSEELR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 120.15 2.0328e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NIYSEELR ddPTM_A549_PD325901_60min_R1 2 NIYSEELR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ; 144.12 0.0025753 12586200.0 4452.8 4674.1 4189.7 5215.5 5004.3 4740.0 5044.0 4859.6 5040.2 5619.1 6196.1 False True 4904.8449780218925 5068.002810755376 4474.038236712786 5537.649589740092 4652.815231897779 4701.399011541993 5235.952180182707 4762.671465717549 4828.377921767636 5264.309067038392 5434.0189803140565 0.902618300707227 0.9326435607080772 0.8233387209211056 1.0190707117147475 0.8562383106782729 0.865178982365328 0.9635505873555299 0.8764546982576591 0.8885463851450481 0.9687689877620088 1.0 12.407803889374927 -10.747481554657805 0.88811626025752 1.003006493719719 0.9028655378406625 0.25987370049819647 0.05200876643037257 0.5590287231408975 0.7454336023726558 0.037653540383750385 0.008572601200204704 1.788621493772954e-11 10.747481554657805 -0.10014095587905647 NIYT(ph)PR ddPTM_A549_MK2206_60min_R1 2 NIYTPR 6 0 Q9UHG0;H0Y784 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 NIYT(1)PR;NIYT(1)PR 84.49799999999999 0.042888 20287700.0 2419.8 2582.2 2352.3 2526.9 4168.2 2696.8 2755.2 2814.3999999999996 4821.4 4169.5 3685.7 True False 2828.2030815700355 2713.622950532051 2685.891511270012 3145.9906134368525 3555.0633015811536 2982.173586009041 3255.7841761135383 3213.34981873852 3729.360598193704 3227.607054156488 2770.438969854854 1.0208501657476352 0.9794920516419896 0.9694822880038857 1.135556728615348 1.283212999912215 1.0764263780787346 1.1751871135006855 1.1598702782133008 1.3461262416436082 1.1650164790764497 1.0 11.435898870849039 -6.331007799110741 4.898590784907634 1.1689550685855896 0.988871519858467 0.4543023205022003 0.08717722245599875 0.21215011953010124 9.799692868938848 0.017821318996260514 0.042893893647748954 4.6665100006619064e-07 6.331007799110741 -0.18008354872712262 NIYT(ph)PR ddPTM_A549_PD325901_60min_R1 2 NIYTPR 6 0 Q9UHG0;H0Y784 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 NIYT(1)PR;NIYT(1)PR 97.79799999999999 0.036481 30805000.0 5363.4 5602.0 5782.6 5712.1 6559.4 6491.200000000001 6501.4 6061.5 6435.5 7239.0 6575.4 True False 5907.888419673602 6074.100200220706 6175.04200959862 6064.923443879667 6098.690372701537 6438.337819350499 6748.814334702588 5940.598627345244 6165.0383150540865 6781.928304584528 5766.667484894861 1.0244891759666483 1.0533120239949902 1.0708163815190401 1.051720679190547 1.0575762151496289 1.1164746079455772 1.170314458459821 1.0301614655094948 1.0690816370464766 1.1760567645609927 1.0 12.493522121393243 -10.407533706301788 0.7611897019152717 0.9999935258753153 1.0733986392370294 0.0 0.06480803980136851 0.6543851499397796 0.6869004565164353 0.027142593074793768 0.008035739808467137 3.912607595638938e-11 10.407533706301788 0.07340511336171407 NKAGT(ph)PVSELTK ddPTM_A549_MK2206_60min_R1 2 NKAGTPVSELTK 12 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 NKAGT(0.957)PVS(0.042)ELT(0.001)K;NKAGT(0.92)PVS(0.08)ELTK 110.04 3.509e-05 57270000.0 6090.1 8430.5 8421.4 9286.0 11673.7 8818.2 9472.0 8332.4 14656.8 14204.9 14173.2 True False 7117.95999135039 8859.576440423081 9615.681151642762 11561.070416864377 9956.514194056877 9751.336070952586 11192.939792446072 9513.543216904789 11337.058202100106 10996.003224268497 10653.603279579678 0.6681269993405666 0.831603750198273 0.9025754854297648 1.0851793626503898 0.9345677638608012 0.9153087284227567 1.0506247978935135 0.8929883127091749 1.064152466032825 1.0321393556436549 1.0 13.379053843274736 -5.310660921725964 1.0521529633431257 1.012122864840258 0.5088147249956934 0.7124582118621848 0.06274458367949151 0.6270023484807344 0.5703713143595869 0.00945163705345603 0.344872275659466 4.890340268626344e-06 5.310660921725964 -0.5033081398445647 NKAGT(ph)PVSELTK ddPTM_A549_PD325901_60min_R1 3 NKAGTPVSELTK 12 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 NKAGT(0.989)PVS(0.011)ELTK;NKAGT(0.998)PVS(0.002)ELTK;NKAGT(0.984)PVS(0.015)ELT(0.001)K 114.27 1.1467e-05 118768900.0 9174.7 8220.699999999999 10779.0 10498.2 12667.900000000001 12721.7 11953.6 11993.2 12429.900000000001 10654.0 11929.599999999999 True False 10106.108789942835 8913.48723954916 11510.527759392586 11146.64997085791 11778.15040588252 12618.098693066198 12408.500789260905 11753.986217516616 11907.51452914161 9981.304621776984 10462.334827965107 0.9659515735369026 0.8519596615971434 1.1001872859799642 1.0654074978621098 1.1257669152778715 1.20604997837948 1.186016409653974 1.1234572789717083 1.1381316622857105 0.9540226714115131 1.0 13.352917226243193 -5.77118597823298 24.948033287154345 1.0935620799448875 0.9089556167160372 0.4942446842265429 0.07427065479065267 111.91803699317012 286475.6646629333 0.010752332787969068 0.034036657806789494 1.6936123883063102e-06 5.77118597823298 -0.18460646322885033 NKAS(ph)PQSEFMPSK ddPTM_A549_MK2206_60min_R1 3 NKASPQSEFMPSK 13 1 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 ANLN Actin-binding protein anillin 1 NKAS(0.993)PQS(0.007)EFMPSK;NKAS(0.993)PQS(0.007)EFMPSK;NKAS(0.944)PQS(0.056)EFMPSK 105.39 2.886e-05 19343700.0 6496.929999999999 8249.7 8695.099999999999 8176.7 10793.6 8902.900000000001 8034.099999999999 7788.0 11476.3 10735.3 11381.7 True False 7593.45294931185 8669.57449268232 9928.195927238812 10179.991867066014 9205.87573819546 9844.998968733275 9493.79197492515 8891.972849749713 8876.936373885263 8310.188274010345 8555.309771060314 0.8875719468391318 1.0133560005049174 1.1604718231036475 1.189903362880143 1.0760423625262276 1.1507472239094765 1.1096958764765479 1.0393513604648443 1.0375937998075653 0.9713486123110198 1.0 13.06260437749269 -8.577306170200862 2.119755383798174 1.0164990667137266 1.0900487267666343 0.15868268367204452 0.07927771638823372 0.4685657599521653 4.168819185410628 0.014586568456171662 0.016799516448703523 2.646633649190178e-09 8.577306170200862 0.07354966005290775 NKAS(ph)PQSEFMPSK ddPTM_A549_PD325901_60min_R1 1 NKASPQSEFMPSK 13 1 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 ANLN Actin-binding protein anillin 1 NKAS(0.509)PQS(0.485)EFMPS(0.007)K 52.731 0.005336100000000001 33383000.0 10335.0 10522.0 12416.0 11681.0 13934.0 14680.0 13853.0 12454.0 13376.0 13096.0 12145.0 True False 11384.201591775116 11408.725866962215 13258.624423473257 12402.508840524211 12955.323909690398 14560.450947138486 14380.183495652476 12205.595200026004 12813.853236292991 12269.116325022651 10651.24199349821 1.0688144724084123 1.0711169527390696 1.2447960934102014 1.1644190271984263 1.2163204927273887 1.3670190721445028 1.350094524603845 1.1459316394723367 1.2030384103670628 1.1518953688698494 1.0 13.378734045999503 -10.482315121300568 0.7797927324473033 0.9982587396471347 1.2080411661355874 0.13750911245808017 0.10048071497201405 0.5602344001696595 0.6060593489116802 0.06858093686969416 0.019107704026477657 3.293706362232622e-11 10.482315121300568 0.2097824264884527 NKASPQS(ph)EFMPSK ddPTM_A549_MK2206_60min_R1 1 NKASPQSEFMPSK 13 1 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 ANLN Actin-binding protein anillin 1 NKAS(0.112)PQS(0.553)EFMPS(0.335)K 45.723 0.010292 6558300.0 1283.0 1472.7 1412.7 1453.9 2022.4 1304.2 1150.6 1255.0 1801.1 2145.9 1939.2 True False 1499.5390336616053 1547.6541395897125 1613.042102610698 1810.1055652680507 1724.90763905708 1442.2095783421053 1359.6491263923626 1432.9000932763074 1393.1537257656867 1661.1396996077244 1457.6431208027057 1.028742229329651 1.0617510675297799 1.1066097589939683 1.2418029759377922 1.1833538775301837 0.9894119882704202 0.9327723000151238 0.9830253186302745 0.955757761199116 1.1396065853848751 1.0 10.509421828146333 -7.330932112906406 7.053949180429484 0.9754256188081629 1.1263224789953619 0.3887803487498901 0.07424113782529836 0.13728589985567605 12.065700142449087 0.00895538212412951 0.014365525488672641 4.667323322548066e-08 7.330932112906406 0.15089686018719894 NKASPQS(ph)EFMPSK ddPTM_A549_PD325901_60min_R1 1 NKASPQSEFMPSK 13 1 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 ANLN Actin-binding protein anillin 1 NKAS(0.134)PQS(0.866)EFMPSK 90.561 4.1969e-05 35271000.0 10786.0 11789.0 11982.0 13334.0 13578.0 15650.0 13565.0 12952.0 12407.0 13731.0 13945.0 True False 11880.986779766472 12782.500403499094 12795.170573619245 14157.610896288825 12624.328121557071 15522.551588740967 14081.223498052816 12693.66219935257 11885.57693650472 12864.02231665288 12229.853404638323 0.9714741777084965 1.0451883584026587 1.0462243618363012 1.1576271953447435 1.0322550650336608 1.2692344769115425 1.1513812171053774 1.0379243135112595 0.9718495016462723 1.051854171185244 1.0 13.578119490391948 -8.516530830913497 4.96156818499234 0.9871968489202567 1.0989218745594835 0.19365101475429558 0.07757251529282078 0.170356149400405 11.992142179401267 0.01283816949359813 0.015041292347063473 3.044171874149281e-09 8.516530830913497 0.11172502563922682 NKDSGSDTAS(ph)AIIPSTTPSVDS(ph)DDESVVK ddPTM_A549_PD325901_60min_R1 2 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 2 NKDS(0.006)GS(0.007)DT(0.036)AS(0.95)AIIPS(0.02)T(0.019)T(0.017)PS(0.05)VDS(0.885)DDES(0.008)VVK;NKDS(0.007)GS(0.008)DT(0.036)AS(0.948)AIIPS(0.004)T(0.004)T(0.004)PS(0.02)VDS(0.958)DDES(0.01)VVK 88.573 9.4912e-10 14874000.0 3354.7 3113.2 2707.77 2826.3 3475.8 2882.31 2722.83 3326.5299999999997 3311.7 3209.6 3128.5 True False 3695.2666744003845 3375.560289776348 2891.5355553437644 3000.8741320069826 3231.671798859044 2858.8374229868346 2826.4487856397463 3260.1797495377 3172.520765746972 3006.945308246237 2743.7143331954817 1.3468117397253496 1.2302885358494968 1.0538763166266372 1.0937268853758542 1.177845579534244 1.0419588469537475 1.030154178750784 1.1882358560778863 1.1562868361926288 1.0959396435211903 1.0 11.421914565175612 -2.0000000003346265 0.016831929391199242 5.724405775962349e-11 2.544256917851872 0.2858541925967857 0.08307674768994487 3215.3614758325075 4.061797448223545 237.2538094284516 395.8304918118489 0.00999999999229494 2.0000000003346265 2.544256917794628 NKDSGSDTASAIIPS(ph)TTPSVDSDDESVVK ddPTM_A549_MK2206_60min_R1 2 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.258)T(0.258)T(0.258)PS(0.214)VDS(0.01)DDESVVK;NKDSGSDTASAIIPS(0.249)T(0.249)T(0.249)PS(0.249)VDS(0.002)DDESVVK 131.57 8.3716e-28 42663000.0 1462.38 1618.5900000000001 1745.12 1354.77 2328.15 1356.44 1802.1999999999998 1974.1399999999999 2483.8 2531.7 2807.8999999999996 True False 1709.193992241667 1700.9693174431402 1992.6042571727764 1686.6887108179365 1985.682219081656 1499.9775804680005 2129.636411945345 2253.9803905501913 1921.2232658135645 1959.7872116579877 2110.6209359023915 0.8098062343491844 0.8059094309684247 0.9440843797566344 0.7991433620915905 0.940804758118578 0.7106807077257993 1.0090094226393256 1.0679228809916579 0.9102644786341748 0.9285358532748965 1.0 11.043451780921911 -7.792947170285873 24.999648606960378 0.9700791135227074 0.8418738947501767 0.49908855506185024 0.07316330672743125 141.45840964294047 112238.73873295226 0.01122877992960885 0.015515574433728007 1.610841573942407e-08 7.792947170285873 -0.12820521877253066 NKDSGSDTASAIIPSTT(ph)PSVDSDDESVVK ddPTM_A549_PD325901_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.062)T(0.062)T(0.428)PS(0.428)VDS(0.02)DDESVVK 114.2 9.626100000000001e-21 42258000.0 1117.2 844.44 1077.1 891.02 1390.4 702.69 1446.4 991.93 1057.8 1270.9 1201.9 True False 1230.6173215608283 915.6039223624377 1150.1984831284674 946.0562817467579 1292.7431006196025 696.967525616127 1501.4435435004505 972.1451779959689 1013.3443445985889 1190.655157106849 1054.0739194718403 1.1674867377208684 0.8686335042054877 1.0911933801614138 0.8975236596507328 1.2264254685927065 0.661213139554153 1.4244195931275592 0.9222741973191756 0.9613598495125849 1.1295746295510705 1.0 10.041760327648651 NKDSGSDTASAIIPSTTPS(ph)VDSDDESVVK ddPTM_A549_PD325901_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.089)T(0.089)T(0.089)PS(0.54)VDS(0.193)DDESVVK 96.44 2.9563e-10 41731000.0 1220.2 1287.3 1053.6 1058.5 1143.9 977.01 1254.2 1373.6 1002.8 1356.1 1508.6 True False 1344.0738057362366 1395.785288779743 1125.103631811488 1123.8811409720802 1063.5564102407673 969.0535544866333 1301.9292673245745 1346.2024704316452 960.6558033309367 1270.475614566527 1323.051763803326 1.0158890547656876 1.0549740584354257 0.8503851947388633 0.8494612015340219 0.8038660612819885 0.7324381260041802 0.9840350188430789 1.0174979598392802 0.7260908678050332 0.9602614571287367 1.0 10.369653792175455 -5.761528971196471 24.999999446388312 0.8694997399141838 1.0354316022145547 0.26600183302108826 0.09792405329117064 2.451403401319648 685119.5231453606 0.016036924159375427 0.055048358667643564 1.731693507969293e-06 5.761528971196471 0.16593186230037082 NKDSGSDTASAIIPSTTPSVDS(ph)DDESVVK ddPTM_A549_MK2206_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.083)T(0.083)T(0.083)PS(0.083)VDS(0.635)DDES(0.033)VVK 74.846 3.0838e-06 1596900.0 334.78 468.56 281.36 305.67 404.31 276.7 171.3 274.92 531.86 436.51 433.06 True False 391.2826794148343 492.4077026184256 321.26107877861256 380.55916372204774 344.8365345862183 305.98021034140504 202.42299265688487 313.89075190718916 411.39455920589506 337.9020878306388 325.5192501520316 1.2020262372565935 1.5126838194314158 0.9869188339201743 1.1690834368299574 1.0593429863983919 0.939975777771972 0.6218464578126933 0.9642770796522435 1.263810232463229 1.038040262358751 1.0 8.346599051991074 -5.7711123344213116 24.99588106125193 1.062124052672898 1.3573550508611714 0.3458134841226258 0.17289340150410956 180.26313360431882 465822.66007728927 0.027139580993438137 0.08593347962607727 1.6938996004454479e-06 5.7711123344213116 0.2952309981882735 NKDSGSDTASAIIPSTTPSVDS(ph)DDESVVKDK ddPTM_A549_MK2206_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVKDK 31 2 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.003)T(0.012)T(0.012)PS(0.259)VDS(0.673)DDES(0.042)VVKDK 80.184 1.8624000000000002e-06 16643000.0 1295.5 971.32 1025.2 743.52 1467.0 762.51 1314.6 1102.4 2059.5 1883.0 1887.8 True False 1514.148728065947 1020.7560391568408 1170.5887758168658 925.6824333778809 1251.2062433231486 843.1983020868269 1553.4458035419775 1258.6685759584086 1593.0265383456938 1457.6289921997043 1419.0071593705381 1.0670479835616988 0.7193452354459163 0.8249350738555336 0.6523451465801675 0.8817476607222863 0.5942170879961337 1.0947413431170252 0.8870065014448167 1.1226346025289609 1.027217503854102 1.0 10.470666152962817 -7.783047825066489 24.984051635067413 1.046356228255884 0.7862403137255153 0.44850070587808155 0.12962001626014466 141.75339806459237 163897.15628685924 0.019013000091337415 0.0262827469625517 1.6479809037578036e-08 7.783047825066489 -0.26011591453036875 NKDSGSDTASAIIPSTTPSVDS(ph)DDESVVKDK ddPTM_A549_PD325901_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVKDK 31 2 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPSTT(0.001)PS(0.209)VDS(0.768)DDES(0.022)VVKDK 134.19 1.3338999999999999e-28 38868000.0 2128.5 2338.3 2262.7 2834.1 3242.3 3107.5 2448.0 2978.0 2899.2 2724.6 3259.3 True False 2344.583753081118 2535.3567472645655 2416.260428720437 3009.155920291899 3014.5720333277736 3082.1935502883425 2541.159979596999 2918.6014538041954 2777.3567062395805 2552.5682910168543 2858.4267624049976 0.8202357268403313 0.8869762838112353 0.8453112951851408 1.052731509468545 1.0546262975761533 1.0782831978857748 0.8890065028144855 1.0210516820618376 0.9716382251832798 0.8929976183364576 1.0 11.481005611187491 -6.24950857457935 24.86899783267391 0.9967777374761243 0.8544546044034677 0.5370815517708601 0.059581243726999494 358.5788667957869 747432.9330377593 0.007005476711080785 0.01837809972337307 5.629780020165298e-07 6.24950857457935 -0.14232313307265665 NKDSGSDTASAIIPSTTPSVDSDDES(ph)VVK ddPTM_A549_MK2206_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.06)T(0.06)T(0.06)PS(0.054)VDS(0.338)DDES(0.428)VVK 54.841 0.0014941 3497000.0 215.62 291.56 516.56 437.09 453.54 417.87 248.6 203.31 523.0 432.39 545.34 True False 252.01138459712823 306.3991586465515 589.815975454507 544.1770696217154 386.82486680080507 462.08872604034343 293.76740206947784 232.12981511076188 404.5413350593827 334.7127986921031 409.9170273816769 0.6147863293380065 0.7474662875159388 1.4388667365733134 1.3275298005979828 0.943666256734023 1.127273802193362 0.7166508889516042 0.5662848810977155 0.986885901381967 0.8165379243454783 1.0 8.679188108532225 NKDSGSDTASAIIPSTTPSVDSDDES(ph)VVKDKK ddPTM_A549_MK2206_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVKDKK 32 3 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.001)T(0.001)T(0.001)PS(0.022)VDS(0.399)DDES(0.578)VVKDKK 83.99799999999999 7.6568e-07 5098000.0 920.3 1003.5 1189.0 1197.6 1309.9 857.88 743.54 982.46 1410.7 1310.6 1517.1 True False 1075.6241408252345 1054.5738637049471 1357.6180788590077 1491.012053762307 1117.2154452140371 948.6602921853444 878.6315934623472 1121.7267136575636 1091.1787024249925 1014.5345497487684 1140.3622001700626 0.9432302654935654 0.9247709750004676 1.1905148019256915 1.3074898953507508 0.9797022779669708 0.831893842187921 0.7704846699858313 0.9836582740907056 0.9568702840748884 0.889659925239078 1.0 10.155276408521823 -6.97605512594351 24.995316038569356 0.9509502562988532 1.0937810007156596 0.30592725328510073 0.12070562741746477 279.28707203273206 291537.7721698381 0.018475092314130553 0.03491354550035536 1.0566833735810721e-07 6.97605512594351 0.14283074441680643 NKEEAAEYAK ddPTM_A549_MK2206_60min_R1 2 NKEEAAEYAK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 ; 104.87 0.00033793 17462900.0 5343.0 6403.6 6009.1 5384.5 7851.1 6707.1 6780.4 6489.700000000001 8945.599999999999 8921.0 8807.5 False True 6244.767776191704 6729.515888012952 6861.280738159516 6703.702741719394 6696.213590289283 7416.840870187345 8012.310913080806 7409.634848872715 6919.435883187785 6905.739904096416 6620.354675366049 0.943267858356308 1.0164887257555981 1.0363917153396536 1.0125896678411321 1.0114584366915418 1.1203086894702143 1.2102540280650136 1.1192202249289651 1.0451760098193228 1.0431072416395255 1.0 12.692692793943072 -4.384785325746475 0.9134759411754778 1.0485551109313895 0.5615484117732291 0.23215063712400352 0.06114834125224519 12.914566324738733 2.4916980942169107 0.010937649360720825 9.195958495028378 4.1230127161868935e-05 4.384785325746475 -0.4870066991581604 NKEEAAEYAK ddPTM_A549_PD325901_60min_R1 1 NKEEAAEYAK 10 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 92.925 0.00061641 12478000.0 3633.6 2861.1 3411.3 3351.5 3585.5 3348.0 3966.4 3873.0 4276.6 4030.9 4306.6 False True 4002.4803970850576 3102.214938031325 3642.811331813333 3558.514543191243 3333.666849303497 3320.734998025861 4117.343522497361 3795.749976690277 4096.8693742771065 3776.3882860823005 3776.9155017866915 1.0597219861528968 0.8213620179121838 0.9644937330713594 0.9421747829698248 0.8826426875916306 0.8792187689809232 1.0901338726136784 1.0049867345178032 1.084713007833789 0.9998604110406649 1.0 11.882992792422979 -7.759355328817197 24.999978192873225 1.0412541533405013 0.9208870487117954 0.43270723454871407 0.06306025560494453 36.170771346136284 433895.03689513303 0.009259376581693353 0.013359673949818752 1.7403823536684285e-08 7.759355328817197 -0.12036710462870592 NKELYEINPPEISEEIIGS(ph)PIPEPR ddPTM_A549_MK2206_60min_R1 2 NKELYEINPPEISEEIIGSPIPEPR 25 1 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 NKELYEINPPEISEEIIGS(1)PIPEPR;NKELYEINPPEISEEIIGS(1)PIPEPR 187.89 1.0552e-57 26727000.0 5270.299999999999 6138.6 5214.2 5972.8 8613.9 6030.4 5795.1 5358.5 9110.7 7725.7 8250.0 True False 6159.797793536059 6451.02851991947 5953.651965337791 7436.136268129179 7346.806720764332 6668.532925344453 6847.994657010581 6118.0837847180055 7047.1409967983145 5980.4590042683185 6201.297311583298 0.9933079296214804 1.0402708007354693 0.9600655582529586 1.199125907774063 1.1847209304158592 1.0753448174285103 1.1042842026327826 0.9865812711946805 1.13639786043399 0.9643883696879878 1.0 12.598354343581287 -6.170759702804624 23.360276781147107 1.079596707657835 1.0021205250227314 0.1993105231131468 0.0743181834723944 50.558701182383736 13021.247772530247 0.01052744969894927 0.02785302692539426 6.749013505240046e-07 6.170759702804624 -0.07747618263510359 NKENLQPQSSGVQGQVPIS(ph)PEPLQRPEMLK ddPTM_A549_PD325901_60min_R1 2 NKENLQPQSSGVQGQVPISPEPLQRPEMLK 30 2 Q9H467 Q9H467 CUEDC2 CUE domain-containing protein 2 1 NKENLQPQS(0.001)S(0.001)GVQGQVPIS(0.997)PEPLQRPEMLK;NKENLQPQS(0.006)S(0.006)GVQGQVPIS(0.988)PEPLQRPEMLK 64.936 0.00029735 10308900.0 2142.3500000000004 2548.0 2080.8199999999997 1707.87 2927.6 2427.5 2831.7 2472.6000000000004 2416.6000000000004 2747.6000000000004 3139.4 True False 2359.8397948852876 2762.728902206777 2222.036958187148 1813.3612510458072 2721.9754756717093 2407.731244835061 2939.461893065695 2423.2820532828237 2315.038705952875 2574.1160670916497 2753.2737022962747 0.8571032342033933 1.0034341663535364 0.8070526937928231 0.6586200454874627 0.9886323591445114 0.8744976000122959 1.0676242941681158 0.8801457157208045 0.840831299853006 0.934929231679653 1.0 11.426932319701972 NKENLQPQSSGVQGQVPIS(ph)PEPLQRPEMLKEETR ddPTM_A549_MK2206_60min_R1 1 NKENLQPQSSGVQGQVPISPEPLQRPEMLKEETR 34 3 Q9H467 Q9H467 CUEDC2 CUE domain-containing protein 2 1 NKENLQPQSSGVQGQVPIS(0.98)PEPLQRPEMLKEET(0.02)R 68.811 7.8718e-05 12061000.0 1298.8 1344.0 1034.6 1196.2 1605.2 1249.1 1006.3 811.51 1716.1 1262.7 1471.9 True False 1518.005687388693 1412.4038593118573 1181.321837163607 1489.269053699459 1369.077206395582 1381.2789329145257 1189.1316842418157 926.5440276451451 1327.4060900485783 977.4551930167637 1106.3866076266008 1.3720391018154943 1.276591608734056 1.0677296968532146 1.346065691173007 1.2374311085819267 1.248459555993378 1.0747885739440737 0.8374505089434782 1.1997669538825169 0.8834662190222834 1.0 10.111639883114519 -7.75973461220458 7.543771806892633 1.0719222953073422 1.2535873971497102 0.47907573813788795 0.12429113665895036 0.11264142843417581 41.4723559419179 0.018778552551957338 0.026980551883961187 1.7388630850999016e-08 7.75973461220458 0.18166510184236806 NKENLQPQSSGVQGQVPIS(ph)PEPLQRPEMLKEETR ddPTM_A549_PD325901_60min_R1 3 NKENLQPQSSGVQGQVPISPEPLQRPEMLKEETR 34 3 Q9H467 Q9H467 CUEDC2 CUE domain-containing protein 2 1 NKENLQPQSSGVQGQVPIS(0.843)PEPLQRPEMLKEET(0.157)R;NKENLQPQSSGVQGQVPIS(0.99)PEPLQRPEMLKEET(0.01)R;NKENLQPQSSGVQGQVPIS(0.974)PEPLQRPEMLKEET(0.026)R 78.499 2.7307999999999998e-06 43032200.0 3191.87 2779.9700000000003 3689.3500000000004 3475.83 3831.2099999999996 3678.46 3787.3 3678.33 3430.91 3615.13 4360.18 True False 3515.9062926694955 3014.247828205562 3939.731476863813 3690.524124917326 3562.1190265569794 3648.503841349525 3931.4277739900826 3604.9628225559377 3286.7207840109127 3386.8700748380556 3823.905501458298 0.9194542834096336 0.7882642045040177 1.0302899680343416 0.9651190709367411 0.9315395020087491 0.9541302315023523 1.0281184439549511 0.9427437004343168 0.8595193533829424 0.885709668700345 1.0 11.900831155715572 -5.754977555329015 24.99999909630486 0.9474803678573096 0.8538592730078114 0.30604185053419164 0.05792498395259611 164.15965801626402 635094.7237501629 0.008868493402586318 0.03275587322961085 1.7580144671432305e-06 5.754977555329015 -0.09362109484949821 NKENVYT(ph)PK ddPTM_A549_MK2206_60min_R1 2 NKENVYTPK 9 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 NKENVY(0.001)T(0.999)PK;NKENVY(0.029)T(0.971)PK 89.28299999999999 0.00043345 28379000.0 5713.4 5238.5 5879.2 5257.4 8517.3 6039.5 5581.7 4487.0 9353.599999999999 7634.0 7736.9 True False 6677.682240781156 5505.117274557415 6712.958964867853 6545.46323601365 7264.416452799081 6678.595881304357 6595.822639304929 5123.045990861191 7235.024534629902 5909.4740979567405 5815.6142024228875 1.148233360802908 0.9466097789402684 1.1542992246753776 1.125498186122232 1.2491228269187107 1.1483904620980423 1.134157530008953 0.8809122841619789 1.2440688606227803 1.0161392919590073 1.0 12.505715851252397 -11.206811714819496 1.6481040103391746 0.9999263224101577 1.1307881495826504 0.11505297618396126 0.10640578911498605 0.5803534257624162 2.8352644405948015 0.08107275343860504 0.016833671156517332 6.211382657938454e-12 11.206811714819496 0.13086182717249273 NKENVYT(ph)PK ddPTM_A549_PD325901_60min_R1 2 NKENVYTPK 9 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 NKENVY(0.02)T(0.98)PK;NKENVY(0.027)T(0.973)PK 64.199 0.0025273 24589000.0 4545.700000000001 4001.6 4641.4 4736.7 4703.0 4805.9 5005.9 5371.799999999999 5962.9 6723.4 7913.4 True False 5007.176117632528 4338.828875616419 4956.393315005544 5029.275201173791 4372.677504469209 4766.762343791068 5196.402263833589 5264.655234904424 5712.300049543316 6298.88337657738 6940.101967175683 0.7214845172757929 0.6251822950350875 0.7141672180679182 0.7246687764762749 0.6300595474173843 0.6868432720925758 0.74875013197368 0.7585847095337286 0.8230858965128393 0.9076067479078768 1.0 12.760741144361589 -9.445950859616982 0.44227020264318007 1.0094589372232812 0.669258858751068 0.847864527035679 0.04219084604898224 0.18441237108901237 0.08397322376203777 0.024660955139141745 0.012807499579954732 3.58136957975907e-10 9.445950859616982 -0.3402000784722131 NKEQHLS(ph)ENEPVDTNSDNNLFTDTDLK ddPTM_A549_PD325901_60min_R1 2 NKEQHLSENEPVDTNSDNNLFTDTDLK 27 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 NKEQHLS(1)ENEPVDTNSDNNLFTDTDLK;NKEQHLS(1)ENEPVDTNSDNNLFTDTDLK 117.49 8.993900000000001e-18 18379000.0 5714.1 6007.3 5775.7 6929.1 6123.4 7081.6 5792.3 6065.299999999999 6741.9 6214.200000000001 6135.299999999999 True False 6294.191225501909 6513.556253621183 6167.6737341055505 7357.094769872128 5693.313508583189 7023.929797496996 6012.729146168181 5944.322833364197 6458.561388588793 5821.834351477996 5380.696994871101 1.1697724721354044 1.21054135920122 1.1462592560005884 1.3673125947967217 1.058099631703862 1.3053940417370147 1.1174628773743502 1.1047495963869265 1.2003205894599 1.0819851697702711 1.0 12.393577350736484 -12.138499882736612 0.3177062877793174 0.7668202489421284 1.2046697131851687 0.2832376464896177 0.08675784867299142 5.534409047022996 0.3451640824571994 0.9684607947184661 0.028824615536749542 7.269425954950845e-13 12.138499882736612 0.4378494642430403 NKES(ph)SLLVSELEDTTEK ddPTM_A549_MK2206_60min_R1 1 NKESSLLVSELEDTTEK 17 1 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 NKES(0.5)S(0.5)LLVSELEDTTEK 99.999 4.4265e-08 1918900.0 765.16 864.78 930.33 1008.3 1139.6 918.97 944.74 853.55 1649.4 1417.4 1149.1 True False 894.3003016340722 908.7936082259739 1062.2647832673674 1255.3335452643062 971.966349618992 1016.2147954370838 1116.3870290873633 974.5433263872452 1275.8135335505647 1097.208355572947 863.746756453377 1.0353732676301453 1.0521528462318788 1.2298336003357322 1.453358332040308 1.1252908822604146 1.1765193765933832 1.2924934545298328 1.128274368738366 1.4770689719162264 1.2702894076015807 1.0 9.754464577669353 -5.755357157322781 6.586693403999341 1.2331504226517505 1.0417455853642295 0.24380865272820473 0.13251238552185876 0.200994720617673 38.94182500778834 0.024361535302532558 0.08767043690818166 1.756478518017814e-06 5.755357157322781 -0.191404837287521 NKES(ph)SLLVSELEDTTEK ddPTM_A549_PD325901_60min_R1 2 NKESSLLVSELEDTTEK 17 1 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 NKES(0.5)S(0.5)LLVSELEDTTEK;NKES(0.5)S(0.5)LLVSELEDTTEK 139.02 1.9893e-13 6691000.0 2164.4 2167.3 2192.22 2245.25 2578.3999999999996 3213.5 2527.1 2512.9 2847.3 2087.27 2853.5 True False 2384.1282946529327 2349.9459771400125 2340.997232089767 2383.9339931672794 2397.30207899711 3187.330321432529 2623.27017338218 2462.778238168087 2727.6378827524686 1955.4794159842731 2502.537589826854 0.9526843090568267 0.9390252464909432 0.9354493781057396 0.9526066672717669 0.9579484794723804 1.2736393388812413 1.0482440639637622 0.9841123858357236 1.0899488158901898 0.7813986187194771 1.0 11.289176024152725 -7.035537422207848 24.99996081291458 1.0560202048852545 0.9452702768940808 0.09724838924670243 0.10976833490825492 522.869157468736 367828.69704186637 0.011031912991943109 0.0191130285625626 9.214304876595951e-08 7.035537422207848 -0.11074992799117367 NKESKDPADET(ph)EAD ddPTM_A549_PD325901_60min_R1 1 NKESKDPADETEAD 14 2 P16949 P16949 STMN1 Stathmin 1 NKESKDPADET(1)EAD 62.765 0.011082999999999999 5375700.0 1423.1 1584.4 1454.8 1827.6 1826.9 2118.8 1519.5 2230.6 2194.8 2035.3 1656.4 True False 1567.5720643691504 1717.9229484522834 1553.531476423075 1940.4867012192494 1698.584846462852 2101.5451952859025 1577.3254040023055 2186.1089331281523 2102.5601886225954 1906.790810653528 1452.6733007847201 1.0790947032084661 1.1825941507455793 1.0694293586753967 1.335803927952016 1.1692820715747256 1.4466743445691939 1.0858087659147102 1.5048868399709951 1.4473730517982348 1.3126081477669467 1.0 10.50449456895879 -6.250243652752714 24.370450265024218 1.2479774080608073 1.1175948768273554 0.1772842757599261 0.15348784445404204 1111.3442376804348 2419124.808423076 0.026829546878992014 0.07025246371487086 5.620259226475731e-07 6.250243652752714 -0.1303825312334519 NKFGS(ph)ADNIPNLKDSLEEGQVDDAGK ddPTM_A549_MK2206_60min_R1 2 NKFGSADNIPNLKDSLEEGQVDDAGK 26 2 E9PC87;O94876;Q6N039;O94876-2 E9PC87 TMCC1;DKFZp686H13261 Transmembrane and coiled-coil domains protein 1 1 NKFGS(1)ADNIPNLKDSLEEGQVDDAGK;NKFGS(1)ADNIPNLKDSLEEGQVDDAGK 142.64 7.5166e-33 31582000.0 2882.1 3766.1000000000004 3716.3999999999996 2802.1 3960.2 3307.1 3972.6000000000004 3021.6000000000004 5387.6 4288.6 5015.799999999999 True False 3368.5280194202005 3957.7784036862986 4243.441403087984 3488.614625791051 3377.6598260452174 3657.0551269246894 4694.369997832696 3449.9210532619077 4167.317202229311 3319.8022814379433 3770.238430962363 0.8934522527161167 1.0497422049448648 1.1255100919452552 0.9253034495488321 0.8958743294076128 0.9699798020443011 1.2451122346218422 0.9150405515285426 1.105319273180713 0.8805284711371836 1.0 11.880440047490236 NKFGS(ph)ADNIPNLKDSLEEGQVDDAGK ddPTM_A549_PD325901_60min_R1 3 NKFGSADNIPNLKDSLEEGQVDDAGK 26 2 E9PC87;O94876;Q6N039;O94876-2 E9PC87 TMCC1;DKFZp686H13261 Transmembrane and coiled-coil domains protein 1 1 NKFGS(1)ADNIPNLKDSLEEGQVDDAGK;NKFGS(1)ADNIPNLKDSLEEGQVDDAGK;NKFGS(1)ADNIPNLKDSLEEGQVDDAGK 187.49 5.2765e-58 70987600.0 8428.6 9056.43 10567.8 10423.3 11466.5 12084.900000000001 11530.9 12407.900000000001 12400.5 10713.3 11142.199999999999 True False 9284.265267192623 9819.647139643846 11284.994457343812 11067.123567968156 10661.132597277523 11986.484581135828 11969.714709450596 12160.41470069075 11879.350108900351 10036.860409656789 9771.780036225251 0.950109932148969 1.0048985039819915 1.1548555550277309 1.1325596285365511 1.0910123393849767 1.226642897885583 1.2249267446746976 1.2444421237083234 1.2156792380571468 1.0271271326666023 1.0 13.254405673418846 -5.649333302085828 4.058845650240511 1.1337515211933207 0.9616529629608429 0.4053176628214584 0.07856193620843745 0.20941181745631043 6.0888492514366765 0.013679207633645834 0.06031347902880568 2.2421605028497074e-06 5.649333302085828 -0.17209855823247777 NKGSGS(ph)LDG ddPTM_A549_MK2206_60min_R1 1 NKGSGSLDG 9 1 H7BXP1;Q9NYR9-3;Q9NYR9-2;Q9NYR9 H7BXP1 NKIRAS2 NF-kappa-B inhibitor-interacting Ras-like protein 2 1 NKGS(0.383)GS(0.617)LDG 47.894 0.027795999999999998 7446300.0 4115.4 4116.1 4326.3 3678.3 5671.0 4013.1 3549.3 3690.0 5022.2 6154.5 5172.9 True False 4809.978908130142 4325.591908715431 4939.834394085554 4579.483665125163 4836.803412328277 4437.763578319816 4194.161867116645 4213.068800151055 3884.679718805412 4764.194175514114 3888.326165222936 1.2370307180376066 1.1124560350423751 1.2704269611606334 1.177751935031561 1.2439294459370438 1.141304353017252 1.0786548475868856 1.0835173339707473 0.9990622066507338 1.2252557972437892 1.0 11.924933526551557 -8.007658166982528 1.0664631006849605 0.9988220429516321 1.2065228464431312 0.23285122012922221 0.08054373971814532 0.12752301897646806 0.2892083667314753 0.0073233230578963245 0.010885612117152133 9.82520980632263e-09 8.007658166982528 0.2077008034914991 NKGTSDSSSGNVS(ph)EGESPPDSQEDSFQGR ddPTM_A549_MK2206_60min_R1 1 NKGTSDSSSGNVSEGESPPDSQEDSFQGR 29 1 S5FZ81;Q8WUB8-3;Q8WUB8-2;Q8WUB8 S5FZ81 PHF10 PHD finger protein 10 1 NKGT(0.001)S(0.002)DS(0.009)S(0.036)S(0.195)GNVS(0.758)EGESPPDSQEDSFQGR 105.66 4.284399999999999e-15 4055300.0 375.36 365.62 513.66 430.38 340.77 323.61 338.84 373.85 559.85 572.46 744.49 True False 438.7115913290885 384.22849631071546 586.5047118475334 535.8231193204922 290.6431844152893 357.85419540506723 400.40284198399803 426.84438236760786 433.0448688967403 443.140888409263 559.6125861212904 0.7839559048695202 0.6865973100673576 1.048054897965455 0.957489400004949 0.5193649886071278 0.6394677394326973 0.71550006542779 0.7627497896823457 0.7738297522902428 0.791870839576179 1.0 9.1282845999732 -10.453960178059114 0.7846104750529245 1.0006413993633527 0.7642741232502139 0.04230450133577468 0.14809886162380595 0.708859242590256 0.7856254006977592 0.09708852135540129 0.028093926964096173 3.515926777809665e-11 10.453960178059114 -0.2363672761131388 NKHPDEDAVEAEGHEVKR ddPTM_A549_PD325901_60min_R1 1 NKHPDEDAVEAEGHEVKR 18 2 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 0 79.393 7.2907e-05 3089600.0 724.59 839.99 711.97 652.94 789.26 784.84 913.2 628.27 731.57 888.63 1061.6 False True 798.1498433850344 910.7789052451618 760.2885656234105 693.2706208656688 733.8251003991852 778.4485232528725 947.9523257222147 615.7386619817197 700.8246570032045 832.5217501454553 931.0299300368627 0.857276246053049 0.9782487929352615 0.8166102303427647 0.7446276413887358 0.788186369443709 0.8361154653986806 1.0181759953567573 0.6613521672255376 0.7527412754340308 0.8941944005092219 1.0 9.862683736959106 -10.932051412033852 1.223980747096693 0.998794293146934 0.8228732252375528 0.1453987627492107 0.10069703462945226 0.46526131119293745 1.2522883587914935 0.06732076549112136 0.016297665610801173 1.1693609531947756e-11 10.932051412033852 -0.17592106790938122 NKKS(ph)PEIHR ddPTM_A549_MK2206_60min_R1 11 NKKSPEIHR 9 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR 93.839 0.00024702 5459531900.0 26192.060000000005 30322.67 31846.420000000002 29014.32 42350.64 33547.520000000004 31246.870000000003 32906.44 45108.270000000004 43911.350000000006 38478.619999999995 True False 30612.63939361405 31865.964384404662 36362.72122702863 36122.829702502306 36120.916957553556 37097.49629935852 36924.021812963445 37571.02864174601 34891.31886810536 33991.74553724294 28923.31669811336 1.0584069494219133 1.1017396350842172 1.2572113221510497 1.2489172690509094 1.2488511374599611 1.2826155688354495 1.2766178304638196 1.2989875619692235 1.2063387899901978 1.1752367784106927 1.0 14.819945378227057 -10.358996882176644 0.8374002753626973 1.0060090593698143 1.2238107681031618 0.1677739280362831 0.0872931186480883 0.3597250542684589 0.4754685628743472 0.04482060739852685 0.015244453392110802 4.37525246164163e-11 10.358996882176644 0.21780170873334748 NKKS(ph)PEIHR ddPTM_A549_PD325901_60min_R1 9 NKKSPEIHR 9 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR 93.839 0.00024702 7658398000.0 24731.23 24276.299999999996 26536.29 28069.100000000002 31508.899999999998 31288.100000000002 30607.569999999996 30662.5 29876.399999999998 28037.599999999995 29049.3 True False 27241.926263430723 26322.148998682256 28337.20221507484 29802.864557448698 29295.823563803926 31033.300087136482 31772.357825454957 30050.91238323408 28620.79880597964 26267.301151073236 25476.420258684848 1.0692996106524824 1.0331965296305357 1.1122913630463747 1.169821515536076 1.1499191513696692 1.2181185493106046 1.2471280306590107 1.17955788443197 1.1234230914456234 1.0310436428806664 1.0 14.636874955500756 -10.158429809977807 0.8844183494530853 1.0093274818923434 1.146635430650124 0.4129921354184638 0.05897959536391282 0.40895674952772587 0.633153135331942 0.030203359692095314 0.01298045783077549 6.943368103193115e-11 10.158429809977807 0.13730794875778063 NKKS(ph)PEIHRR ddPTM_A549_MK2206_60min_R1 2 NKKSPEIHRR 10 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NKKS(1)PEIHRR;NKKS(1)PEIHRR 79.82 0.00021542 74931000.0 3479.3 3744.1000000000004 3119.4 2965.8 4439.799999999999 3837.2 3901.9 2645.3999999999996 6198.6 5750.299999999999 6377.6 True False 4066.5207792820165 3934.6586976558965 3561.777826066265 3692.4211331398233 3786.711301367497 4243.249957072788 4610.824722988319 3020.393551197724 4794.626997130188 4451.303236243208 4793.865907194378 0.8482758712919356 0.8207694528440961 0.7429865363403133 0.7702387185253626 0.7899076391946221 0.8851415619916995 0.9618176253258647 0.6300538249651243 1.000158763292621 0.9285414574410454 1.0 12.226973839512441 -8.827812123745291 24.324533092919406 1.0000756449739914 0.8106145105191225 0.45190561394225703 0.08218051353923705 22.564222489375943 8269.100579943137 0.013143065837999904 0.013991858677355815 1.4865785986878186e-09 8.827812123745291 -0.1894611344548689 NKKS(ph)PEIHRR ddPTM_A549_PD325901_60min_R1 2 NKKSPEIHRR 10 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NKKS(1)PEIHRR;NKKS(1)PEIHRR 99.01100000000001 8.4299e-05 91095000.0 6205.1 6351.5 7549.700000000001 7351.7 8271.7 10375.400000000001 7816.6 9713.0 10483.0 7763.799999999999 10056.099999999999 True False 6835.037184046812 6886.763195591191 8062.0680420341605 7805.797812077888 7690.72432781585 10290.906182352914 8114.0649904076445 9519.266595298908 10042.435965614488 7273.592343021607 8819.263450870092 0.7750122470116799 0.7808773639607915 0.914143010575194 0.8850850023431132 0.8720370324187444 1.166866852280916 0.9200388485511367 1.079372064155738 1.1386932731467183 0.8247392067989542 1.0 13.106442457434845 -6.69528598110882 0.8241539767257786 1.0655492801242035 0.7809058181982007 0.35556731820047693 0.10507953274427317 0.3439782437685539 0.4151030059601591 0.013733177296895336 0.056893125753856646 2.0170377153341363e-07 6.69528598110882 -0.28464346192600276 NKKSPEIHR ddPTM_A549_MK2206_60min_R1 2 NKKSPEIHR 9 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ; 77.67699999999999 0.00056057 4032900.0 761.8399999999999 930.96 955.51 592.97 1269.68 1266.3400000000001 857.6899999999999 1201.47 1310.01 1223.03 1249.5 False True 890.4199668002789 978.3418875483385 1091.0156858961905 738.2476766194349 1082.9117539349254 1400.343258271539 1013.521170880814 1371.7820518475594 1013.2948266561032 946.7466735687752 939.2146655543431 0.9480473415252043 1.0416595091931424 1.1616254791467202 0.786026564207988 1.1529970662199673 1.4909725216492746 1.0791155718193708 1.4605628533684645 1.078874578750361 1.0080194744510156 1.0 9.87531112564745 NKLEGDS(ph)DVDS(ph)ELEDRVDGVK ddPTM_A549_PD325901_60min_R1 3 NKLEGDSDVDSELEDRVDGVK 21 2 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 2 NKLEGDS(1)DVDS(1)ELEDRVDGVK;NKLEGDS(1)DVDS(1)ELEDRVDGVK;NKLEGDS(1)DVDS(1)ELEDRVDGVK 173.07 1.1617e-35 74528000.0 5769.0 6649.6 6696.799999999999 7105.800000000001 7576.5 6878.099999999999 6663.6 7987.9 6627.9 7270.0 7516.400000000001 True False 6354.664633086665 7209.985128773233 7151.285119129812 7544.7091275573075 7044.352777506048 6822.087034026789 6917.186944461834 7828.575068113679 6349.3524121431155 6810.970959294034 6591.9304503853355 0.964006626118939 1.0937592838759045 1.084854455451935 1.1445371252538439 1.0686327518965657 1.0349148986588594 1.0493416149524888 1.187599767175343 0.9632007588569081 1.0332285831225503 1.0 12.686485305791608 -8.819648740254834 24.999995981988874 0.9826224833894804 1.0786337934852155 0.2675675881423848 0.056995507516846865 55.682063437812964 23914.218981656624 0.009212425917170808 0.009807375793033124 1.5147859202212213e-09 8.819648740254834 0.09601131009573505 NKLEGDS(ph)DVDSELEDRVDGVK ddPTM_A549_MK2206_60min_R1 2 NKLEGDSDVDSELEDRVDGVK 21 2 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 1 NKLEGDS(0.995)DVDS(0.005)ELEDRVDGVK;NKLEGDS(0.999)DVDS(0.001)ELEDRVDGVK 154.45 4.875799999999999e-28 68082000.0 5655.8 6896.2 6907.9 6099.5 8225.9 6639.8 6134.200000000001 6332.799999999999 11035.599999999999 9625.8 8567.2 True False 6610.360768965945 7247.18712394824 7887.544093313823 7593.877773816962 7015.8810067838385 7342.4192288574695 7248.70473762909 7230.493793386616 8536.054220231978 7451.325094591563 6439.727797308656 1.026496923011032 1.1253871828211504 1.22482569785174 1.1792234101867873 1.0894685656924774 1.1401754018121812 1.1256228470803578 1.1227949411787939 1.3255302846495214 1.1570869653381441 1.0 12.652783992602524 NKLEGDS(ph)DVDSELEDRVDGVK ddPTM_A549_PD325901_60min_R1 1 NKLEGDSDVDSELEDRVDGVK 21 2 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 1 NKLEGDS(0.998)DVDS(0.002)ELEDRVDGVK 203.94 1.4612e-56 57297000.0 7173.3 7559.7 7906.2 9195.8 9846.9 9968.5 9456.4 9687.2 10208.0 10057.0 10064.0 True False 7901.528135295645 8196.782449769462 8442.762275842808 9763.803680822924 9155.287713960839 9887.319841045644 9816.268476740635 9493.981196538612 9778.993259276225 9421.999303661636 8826.191800952318 0.8952363956608212 0.9286884575616242 0.9565577619706679 1.1062306259614074 1.0372862861390586 1.120224901523082 1.112174842572704 1.0756599687210788 1.107951592239487 1.067504481677481 1.0 13.107575383355563 -6.095364484694625 3.908725998366083 1.0649526605191857 0.9166054476791873 0.7704276468190683 0.036689083752055776 0.11329561535746585 3.1092489505558842 0.006825196949326052 0.01986701240868856 8.028520401468386e-07 6.095364484694625 -0.1483472128399984 NKLEGDSDVDS(ph)ELEDR ddPTM_A549_MK2206_60min_R1 1 NKLEGDSDVDSELEDR 16 1 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 1 NKLEGDS(0.164)DVDS(0.836)ELEDR 46.356 0.023375 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NKLSS(ph)SKENLDASK ddPTM_A549_MK2206_60min_R1 1 NKLSSSKENLDASK 14 2 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 NKLS(0.221)S(0.389)S(0.389)KENLDAS(0.001)K 49.537 0.005657100000000001 8387900.0 1877.4 2728.3 3007.6 2909.5 4370.6 2904.0 3191.0 2485.6 5120.6 4013.0 3795.2 True False 2194.259221976851 2867.1588164884965 3434.1229049422604 3622.327630612417 3727.6905296988093 3211.2993524808116 3770.763395026966 2837.941411830751 3960.7922759179223 3106.460512850456 2852.7470978085976 0.7691741141941468 1.0050518739256522 1.2037950744320307 1.2697682291553256 1.3067020671276186 1.1256866600434523 1.3218007996304908 0.9948100250494619 1.3884133924666842 1.0889365255114112 1.0 11.478136139219387 -5.444114706336951 2.363951596778867 1.1947867204019393 0.7433574358074485 0.511952464379628 0.12323272591704011 0.28963299786668095 2.4875291251153637 0.02081949496958912 0.22513364328121022 3.5965433031200896e-06 5.444114706336951 -0.45142928459449083 NKLSSS(ph)KENLDASK ddPTM_A549_MK2206_60min_R1 1 NKLSSSKENLDASK 14 2 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 NKLS(0.005)S(0.129)S(0.867)KENLDASK 78.021 0.00013969999999999998 9189400.0 2292.5 3040.7 3147.9 2736.5 4548.3 3260.6 3441.4 2563.7 5881.1 4033.2 4628.9 True False 2679.4179537562227 3195.4586421202125 3594.319554617551 3406.942622846152 3879.251095096577 3605.6345277888904 4066.657833796865 2927.1123260019676 4549.040240186874 3122.097318820946 3479.416378859139 0.7700768353095967 0.9183892625026864 1.0330236922653355 0.9791707148206418 1.1149143053607569 1.0362756667171684 1.1687758494515899 0.8412653178811943 1.3074147342142628 0.8973048864719796 1.0 11.764629620064467 -4.256349992006215 0.49044276486561583 1.123525329197381 2.3403421070962812e-20 0.17771492380218112 0.13222980617022675 7.920673830378797 0.61544009115264 0.02601775914129725 6.4252618107067345 5.541789277052146e-05 4.256349992006215 -1.123525329197381 NKLSSS(ph)KENLDASK ddPTM_A549_PD325901_60min_R1 2 NKLSSSKENLDASK 14 2 K7EQL6;Q8NFA0;K7EN13 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 1 NKLS(0.178)S(0.178)S(0.643)KENLDAS(0.002)K;NKLS(0.006)S(0.03)S(0.964)KENLDASK 104.89 4.612e-06 31453000.0 5863.299999999999 7114.599999999999 7381.5 9321.7 8242.1 13075.3 9548.3 10395.900000000001 11302.9 9331.4 8790.1 True False 6458.537899666676 7714.172310690867 7882.452978565394 9897.480237883268 7663.2033297013995 12968.81909190189 9911.665781530239 10188.545619074224 10827.878419893534 8742.213811493311 7708.973425034878 0.8377948065941679 1.0006743940300928 1.0225035869195165 1.283890823354147 0.9940627509254552 1.6823016991841835 1.2857309572947964 1.321647521314179 1.404581106056225 1.134030866302248 1.0 12.912323039326546 -5.858621623969618 1.2771046649580489 1.239702165044439 0.8435536301443225 0.3652191118619963 0.1841933837419476 0.6449237003849817 1.630604419392501 0.03127106395992073 0.2509067058700286 1.3847723267648335e-06 5.858621623969618 -0.3961485349001166 NKNSDGGS(ph)DPETQK ddPTM_A549_PD325901_60min_R1 2 NKNSDGGSDPETQK 14 1 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NKNS(0.025)DGGS(0.806)DPET(0.169)QK;NKNS(0.019)DGGS(0.979)DPET(0.002)QK 51.193000000000005 0.0067753 5949700.0 1533.47 1631.44 1585.12 1842.4499999999998 2431.95 1967.1399999999999 1689.99 1996.87 1949.3200000000002 2198.4700000000003 2217.4 True False 1689.1467455190514 1768.927174339177 1692.6957753008962 1956.2539519924526 2261.1382217720356 1951.120264043187 1754.3034942480126 1957.040861335789 1867.3968593429001 2059.658229006762 1944.6738572567247 0.8686015596989948 0.9096266542270144 0.8704265596950617 1.0059547747261144 1.1627339017976694 1.0033149038140288 0.9021067916872909 1.0063594232178912 0.9602622323401642 1.0591278436335034 1.0 10.925312504669362 -6.262102111240948 24.995906578998984 0.9928686542255825 0.8855590934101162 0.43173310151328903 0.06335642705977108 48.35971524630322 1824002.8396974753 0.00880256290198043 0.02164363197773576 5.468873637172644e-07 6.262102111240948 -0.10730956081546628 NKNSDGGS(ph)DPETQKEK ddPTM_A549_PD325901_60min_R1 3 NKNSDGGSDPETQKEK 16 2 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NKNS(0.119)DGGS(0.777)DPET(0.104)QKEK;NKNS(0.176)DGGS(0.823)DPET(0.001)QKEK;NKNS(0.003)DGGS(0.988)DPET(0.009)QKEK 59.512 0.0010347000000000002 46657000.0 3867.2 4385.78 5348.7 5507.4 6163.0 7699.5 7126.5 7338.6 6864.7 6637.5 6415.299999999999 True False 4259.795297117827 4755.385072496249 5711.6949463459605 5847.579589787096 5730.132141195777 7636.797824761088 7397.702857270435 7192.22586597967 6576.200531637293 6218.407117237162 5626.258769937346 0.7571275107144182 0.8452126478621255 1.0151852554072207 1.0393371206159816 1.0184622456068773 1.357349197226158 1.314852935097547 1.2783318649347801 1.1688407520065995 1.1052472649256426 1.0 12.457960193077225 -5.774219881378334 1.1295632040470596 1.1306105896959673 0.7117196327541607 0.6035671324265008 0.11316155924528011 0.5640877542819873 0.9781185684229157 0.02083769707401573 0.22462692019430663 1.6818223462519899e-06 5.774219881378334 -0.41889095694180656 NKPGPNIES(ph)GNEDDDASFK ddPTM_A549_MK2206_60min_R1 5 NKPGPNIESGNEDDDASFK 19 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK 282.38 4.763599999999999e-127 5791405000.0 52815.2 78514.0 80736.1 79223.7 115175.8 90184.2 78064.0 83962.2 126332.2 112378.1 103769.1 True False 61729.114552333944 82510.02723959179 92185.69299963735 98633.510056487 98233.59239245969 99727.43218457294 92247.21832321686 95864.09897345351 97718.15841106865 86991.80916001988 78000.36858853558 0.7913951647839627 1.0578158633434847 1.1818622740865703 1.2645262047003205 1.259399079389709 1.278550781095037 1.1826510565589208 1.22902110218417 1.252790982649679 1.1152743343934128 1.0 16.251193320955053 -5.313587754987414 2.4926544340665817 1.165633371506015 0.7327232192456083 0.6656495964985503 0.0819931407204232 0.30375412759650156 2.528253450245522 0.01608734480136328 0.2637344651469341 4.857493688873418e-06 5.313587754987414 -0.43291015226040663 NKPGPNIES(ph)GNEDDDASFK ddPTM_A549_PD325901_60min_R1 6 NKPGPNIESGNEDDDASFK 19 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK 336.39 1.8523999999999995e-206 11285707500.0 126257.20000000001 136470.6 153352.8 163594.7 179754.0 171504.5 172091.09999999998 180977.69999999998 180892.7 162968.1 163028.4 True False 139074.7379983618 147971.45640561252 163760.24319330015 173699.57306847916 167128.69915763504 170107.82421413565 178640.12098236303 177367.95779924045 173290.4088903091 152678.26635369015 142976.94032217562 0.9727074707640208 1.0349323189612434 1.1453612227558703 1.214878236148256 1.1689206579818907 1.1897570603401144 1.2494330944544354 1.2405354136098463 1.2120164867133605 1.067852382416732 1.0 17.12542295874483 -5.623388155060317 3.309004592699141 1.141856913755507 0.982350994988193 0.39437529167241714 0.0741540359650086 0.2725539065704111 5.613490211687332 0.014100365459761777 0.07141669220831012 2.380191198600535e-06 5.623388155060317 -0.15950591876731401 NKPGPNIES(ph)GNEDDDASFKIK ddPTM_A549_PD325901_60min_R1 1 NKPGPNIESGNEDDDASFKIK 21 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 NKPGPNIES(1)GNEDDDASFKIK 216.14 4.250099999999999e-68 32164000.0 3289.2 3576.9 5667.9 6887.5 4749.4 15678.0 10549.0 11529.0 10445.0 7753.8 8002.3 True False 3623.117162618938 3878.3379161316416 6052.557777851491 7312.925232352576 4415.818528540521 15550.323566024332 10950.447967634289 11299.045050674464 10006.032973465932 7264.223744728215 7018.067830759218 0.5162556489892158 0.5526218910471945 0.8624250896128375 1.0420140427114482 0.6292071600087136 2.215755666804675 1.5603223325428681 1.6099937081189664 1.4257532435937534 1.0350745988646803 1.0 12.776858176350162 NKPGPNIESGNEDDDASFK ddPTM_A549_MK2206_60min_R1 2 NKPGPNIESGNEDDDASFK 19 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 0 ; 235.26 6.8763e-85 30198000.0 6711.4 8255.3 10452.4 8465.8 12535.0 9563.2 8228.7 8523.1 14081.9 12623.9 12923.599999999999 False True 7844.120242023776 8675.459508762782 11934.707491560872 10539.921380044198 10691.118105014086 10575.171476461604 9723.748275981952 9731.27552589904 10892.372134173464 9772.152222320674 9714.313446785198 0.8074806608818729 0.8930594587344505 1.2285693226741081 1.0849888093257092 1.1005531336393255 1.0886174853624158 1.000971229644631 1.0017460913945961 1.121270401026449 1.0059539746017374 1.0 13.245896322478007 -5.571218089934799 8.819076123458053 1.0662495086447095 0.828542505607619 0.6300733478618484 0.06626823781476256 0.11891513094191464 20.09815396691145 0.009459925891754206 0.03697922850345091 2.6839962830711044e-06 5.571218089934799 -0.23770700303709047 NKPGPNIESGNEDDDASFK ddPTM_A549_PD325901_60min_R1 4 NKPGPNIESGNEDDDASFK 19 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 0 ;;; 244.74 1.8018999999999998e-85 55157800.0 19061.699999999997 18809.0 21819.500000000004 20720.399999999998 24313.800000000003 26073.8 23861.899999999998 26497.0 26611.9 25003.6 24439.8 False True 20996.829751518133 20394.10044019123 23300.30248131242 22000.2520485573 22606.08256605645 25861.463617540845 24769.97766223271 25968.496548505613 25493.494388375104 23424.86842885892 21433.859536656848 0.9796103084285267 0.9514898800802818 1.0870791814914866 1.0264251294047995 1.0546902450020648 1.2065705466302872 1.1556471021875614 1.2115641844201455 1.1894028858766823 1.0928908248557376 1.0 14.387604035118995 -6.072367899268562 1.0654674857719308 1.112109753478146 0.9566766086689595 0.4289080389787834 0.06729388404209882 0.7487603930964924 1.3279114721086407 0.013742688431912826 0.0944573644651262 8.465100152901334e-07 6.072367899268562 -0.15543314480918635 NKPLEQS(ph)VEDLSK ddPTM_A549_MK2206_60min_R1 2 NKPLEQSVEDLSK 13 1 O95466-2;O95466;O95466-3 O95466-2 FMNL1 Formin-like protein 1 1 NKPLEQS(1)VEDLSK;NKPLEQS(0.999)VEDLS(0.001)K 142.3 6.9452e-13 69294000.0 5686.9 7068.2 6985.6 6677.7 9877.0 7970.7 7421.2 7415.200000000001 10771.3 8724.1 9273.7 True False 6646.709688643951 7427.94118927684 7976.263121679963 8313.736799773342 8424.106383982782 8814.154183477549 8769.535978431253 8466.327308097594 8331.617748231602 6753.31975084941 6970.784348900606 0.9535095845695232 1.065581836633396 1.1442418417287483 1.1926544250482427 1.2084875908277648 1.2644422409750302 1.2580414971256908 1.2145444306325237 1.1952195522367033 0.9688034248132359 1.0 12.767105281158177 -4.2057402189372795 11.43395223814125 1.1289184727075665 1.1382016603214729 0.0 0.11054904938209008 0.0 0.0 0.015646227913192614 0.0 6.226726366409366e-05 4.2057402189372795 0.00928318761390634 NKPLEQS(ph)VEDLSK ddPTM_A549_PD325901_60min_R1 1 NKPLEQSVEDLSK 13 1 O95466-2;O95466;O95466-3 O95466-2 FMNL1 Formin-like protein 1 1 NKPLEQS(0.705)VEDLS(0.295)K 144.01 5.929699999999999e-13 76673000.0 17496.0 17182.0 17976.0 21159.0 23713.0 20226.0 21126.0 23364.0 23567.0 18740.0 22292.0 True False 19272.181040125535 18629.987440234236 19195.959458469355 22465.943374424438 22047.480685408962 20061.286161908924 21929.961490590787 22897.986691296577 22576.560946450118 17556.753201811604 19550.22532063088 0.9857779500775404 0.9529295511788531 0.9818791928813384 1.1491398695398498 1.1277353751080703 1.02614091821943 1.1217242323774461 1.1712390172369462 1.1547979921553957 0.8980332918866355 1.0 14.25489761455438 -6.161639170202157 6.757968018802031 1.0895885067103956 0.9695102170318288 0.27152388391138216 0.0776363645525737 0.20858197624133334 12.166511962640975 0.009621072303318053 0.02574579614282838 6.892246948760455e-07 6.161639170202157 -0.12007828967856682 NKPLEQS(ph)VEDLSKGPPSSVPK ddPTM_A549_MK2206_60min_R1 1 NKPLEQSVEDLSKGPPSSVPK 21 2 O95466-2;O95466;O95466-3 O95466-2 FMNL1 Formin-like protein 1 1 NKPLEQS(1)VEDLSKGPPSSVPK 89.565 5.990399999999999e-07 3997000.0 1883.1 2827.1 2749.6 2989.0 3718.5 2670.4 2576.4 2009.0 4653.9 3696.3 4092.5 True False 2200.921242625231 2970.9873144795783 3139.534625425336 3721.305134181308 3171.513575867166 2952.9799555319432 3044.498530538226 2293.7819023044635 3599.7990807511687 2861.3032628081583 3076.219302746017 0.7154630492892875 0.9657917794831785 1.020582187564716 1.2097008593826353 1.0309777241941378 0.9599380489212641 0.989688390493007 0.7456496681679673 1.1702023576595377 0.930136307334782 1.0 11.586942640922262 -5.260038618788465 2.203778920078974 1.0476846171783039 0.6279465763368769 0.2755226109803509 0.12078497648442907 0.5299172776156279 2.878606066568671 0.01734545343011258 0.4341949765290067 5.494920091815045e-06 5.260038618788465 -0.41973804084142696 NKPLEQS(ph)VEDLSKGPPSSVPK ddPTM_A549_PD325901_60min_R1 1 NKPLEQSVEDLSKGPPSSVPK 21 2 O95466-2;O95466;O95466-3 O95466-2 FMNL1 Formin-like protein 1 1 NKPLEQS(0.998)VEDLSKGPPS(0.001)S(0.001)VPK 79.875 3.4274000000000004e-05 13633000.0 3096.2 3169.6 3169.5 3081.6 4391.1 4293.1 4438.1 4405.2 3636.5 3712.2 3981.3 True False 3410.523944698028 3436.713315712168 3384.6013297518134 3271.943433178615 4082.6842844726216 4258.138416972766 4606.994324121507 4317.334830187454 3483.670551269395 3477.8110584719866 3491.62533954009 0.9767725952943324 0.9842732199225147 0.9693483694896161 0.9370831962198983 1.16927902837662 1.2195290166881536 1.3194411989026094 1.2364828440488191 0.9977217520503667 0.9960435958257987 1.0 11.769683047012563 -6.7318368557081945 24.997432442268792 1.0686277437698157 0.968289524989215 0.2268948197408227 0.11293317540046095 398.008711839378 336091.0484271364 0.020113435416654744 0.04186503660705182 1.8542280400659273e-07 6.7318368557081945 -0.10033821878060079 NKPLS(ph)PIK ddPTM_A549_MK2206_60min_R1 3 NKPLSPIK 8 1 P35251-2;P35251;A0A1W2PP02;D6RAD2 P35251-2 RFC1 Replication factor C subunit 1 1 NKPLS(1)PIK;NKPLS(1)PIK;NKPLS(1)PIK 93.258 0.00071511 330782000.0 11033.099999999999 13984.3 14074.3 12491.8 17398.300000000003 13641.4 14271.7 13780.6 17966.5 15349.5 17179.6 True False 12895.217546603171 14696.04113822531 16070.247373663007 15552.29156077821 14839.033117388648 15084.923893571535 16864.68315412295 15734.042251317525 13897.116436604958 11882.03728930927 12913.431187160779 0.9985895583990321 1.1380430905797443 1.24445990695648 1.2043500550218695 1.1491162110456286 1.1681576859734824 1.305980022636487 1.2184246017403297 1.0761753584455704 0.9201301433443208 1.0 13.656584765089804 -8.978427371574252 2.857380030274194 1.029960884482304 1.1826830541542661 0.48586071237646733 0.0810108958657899 0.17092166731523312 2.7817696571214645 0.014403896660909443 0.014643488170331344 1.0509271900146383e-09 8.978427371574252 0.15272216967196206 NKPLS(ph)PIK ddPTM_A549_PD325901_60min_R1 2 NKPLSPIK 8 1 P35251-2;P35251;A0A1W2PP02;D6RAD2 P35251-2 RFC1 Replication factor C subunit 1 1 NKPLS(1)PIK;NKPLS(1)PIK 83.045 0.00095453 605070000.0 15532.0 16139.3 16773.8 17492.1 20350.0 16218.5 17848.8 18733.0 18714.6 18214.4 17742.2 True False 17108.797205945924 17499.41545187828 17912.170937053474 18572.54728955856 18920.686203688783 16086.421913226543 18528.04585123812 18359.355619245787 17928.090443774578 17064.339675511055 15560.021877072366 1.0995355495711527 1.1246395146566988 1.15116617949278 1.1936067594432587 1.215980694189662 1.0338302889490036 1.1907467738550628 1.1799055145480373 1.1521892825993743 1.096678385822535 1.0 13.925556468274687 -10.5794203845798 0.7686189571705765 0.994906994348595 1.1507737016184714 0.2719852454421814 0.05563568016460195 0.407798650224625 0.41069339734870514 0.038024659172620295 0.00931584430317053 2.633780727475367e-11 10.5794203845798 0.1558667072698764 NKPLSDMELNS(ph)SSEDSK ddPTM_A549_MK2206_60min_R1 3 NKPLSDMELNSSSEDSK 17 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 NKPLSDMELNS(0.807)S(0.16)S(0.033)EDSK;NKPLSDMELNS(0.97)S(0.025)S(0.004)EDSK;NKPLSDMELNS(0.97)S(0.025)S(0.005)EDSK 87.32600000000001 1.1496e-06 3405900.0 1946.9 2359.0 2620.5 2037.0 3357.7 2406.9 2237.4 2460.5 3860.5 3336.8 3193.9 True False 2275.4891228649894 2479.0630238963336 2992.1263041631864 2536.065091444406 2863.7867779182952 2661.596560429086 2643.9066186253003 2809.283409965225 2986.1029139517123 2583.0145624917527 2400.766482844351 0.9478177653367866 1.0326131431821806 1.2463212584583452 1.0563564218206503 1.192863528536675 1.1086445014326058 1.101276045595607 1.1701610423338118 1.2438123138131592 1.0759124558551318 1.0 11.229279367353136 -5.530022142941867 24.515631177541813 1.1278020400596747 0.9690165561920795 0.37949021541415584 0.07335025950802673 111.2429633003139 381780.98399764276 0.012773670717766037 0.049706423167196555 2.951058760125441e-06 5.530022142941867 -0.15878548386759517 NKPRPPPLSPLGGPVPSALPNGPPS(ph)PR ddPTM_A549_MK2206_60min_R1 1 NKPRPPPLSPLGGPVPSALPNGPPSPR 27 2 Q15642 Q15642 TRIP10 Cdc42-interacting protein 4 1 NKPRPPPLSPLGGPVPS(0.002)ALPNGPPS(0.998)PR 60.876000000000005 0.0001403 2651800.0 1036.4 1284.3 1073.1 1061.2 1880.4 1268.3 1237.2 1267.2 1569.6 1480.5 1697.4 True False 1211.318982452758 1349.6653843111746 1225.2817160837683 1321.1940476390791 1603.7956509508178 1402.5106641705963 1461.983225423805 1446.8294806372407 1214.08810613615 1146.0540217480939 1275.88873414321 0.949392333388842 1.057823733522898 0.9603358688691411 1.0355088279122495 1.2570027526952068 1.0992421412925288 1.1458547961907994 1.1339777849898656 0.9515626822674622 0.8982397846138963 1.0 10.317286806790792 -8.770202549816126 24.960899923115612 0.97712681717335 1.0824394293323796 0.3011291502205866 0.08541423527324966 197.11067899611535 561445.4712943509 0.014904568719281475 0.015983471393886797 1.6974517963537681e-09 8.770202549816126 0.10531261215902954 NKPRPPPLSPLGGPVPSALPNGPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NKPRPPPLSPLGGPVPSALPNGPPSPR 27 2 Q15642 Q15642 TRIP10 Cdc42-interacting protein 4 1 NKPRPPPLSPLGGPVPS(0.001)ALPNGPPS(0.999)PR;NKPRPPPLSPLGGPVPSALPNGPPS(1)PR 104.4 4.5087e-13 12179000.0 3261.7 3612.8 4548.1 5202.4 5122.200000000001 4331.299999999999 4367.1 4468.1 4849.700000000001 4218.0 4224.1 True False 3592.8253828633665 3917.263335122705 4856.761415947063 5523.740432492353 4762.434342630699 4296.027328837939 4533.292380268816 4378.980240343359 4645.883974286044 3951.674760151619 3704.562478776105 0.969837977749628 1.0574159182265623 1.3110215966857215 1.4910641848095538 1.2855591908397475 1.15965848961933 1.2237052030410087 1.182050583687298 1.254097886296394 1.0667048491667372 1.0 11.855087450142584 -10.783375130270722 0.7987872030495653 0.9842877912836786 1.223690855887856 0.2174685981700626 0.12992248708138493 0.8495876745779312 0.8564563614376023 0.1318673228951906 0.025682024327048032 1.6467393740040343e-11 10.783375130270722 0.23940306460417748 NKPRS(ph)PVVELSK ddPTM_A549_MK2206_60min_R1 2 NKPRSPVVELSK 12 2 P25098 P25098 ADRBK1 Beta-adrenergic receptor kinase 1 1 NKPRS(1)PVVELSK;NKPRS(1)PVVELSK 115.8 5.2434000000000005e-06 58730000.0 3202.6 5361.6 5940.0 4570.0 7376.200000000001 5728.6 4875.4 5171.3 7665.1 6647.700000000001 6921.4 True False 3743.120583947512 5634.482538754804 6782.381319110598 5689.650205155095 6291.170751193053 6334.79664966308 5761.197071800209 5904.347611442046 5928.967088649471 5145.979952971841 5202.625359077893 0.7194676390480935 1.0830075490489388 1.3036459193196066 1.093611362045781 1.2092300169597627 1.2176153792449609 1.1073634317619434 1.1348784899800137 1.1396106156873678 0.9891121496943436 1.0 12.34502410728317 -5.267498152199688 5.377037168534369 1.1103671742247496 0.7054729971178287 0.630528502695577 0.08913691898935841 0.07842956891131601 8.23108408121916 0.013228196107134656 0.1159939796696178 5.401344128790593e-06 5.267498152199688 -0.4048941771069209 NKPRS(ph)PVVELSK ddPTM_A549_PD325901_60min_R1 6 NKPRSPVVELSK 12 2 P25098 P25098 ADRBK1 Beta-adrenergic receptor kinase 1 1 NKPRS(1)PVVELSK;NKPRS(0.996)PVVELS(0.004)K;NKPRS(1)PVVELSK;NKPRS(1)PVVELSK;NKPRS(1)PVVELSK;NKPRS(1)PVVELSK 149.99 7.427100000000001e-13 140199000.0 24442.8 25450.100000000002 31026.3 32131.699999999993 36219.7 34829.200000000004 34157.4 35668.9 36222.8 34013.200000000004 33060.299999999996 True False 26924.21506216168 27594.869244133733 33131.93129429835 34116.40213261463 33675.753223181666 34545.56254278445 35457.27854864649 34957.45580778927 34700.481684180144 31865.60074727096 28994.092686508735 0.9286103674039025 0.9517410854168209 1.142713160660999 1.1766673474314084 1.1614694616345542 1.1914689973678285 1.2229138856669637 1.205675107193658 1.1968121251239103 1.09903769336084 1.0 14.823471372203093 -5.743122668082686 7.303899354606764 1.1301120492362031 0.9383819613687706 0.6141943236482732 0.06323234955283713 0.12019714134124537 28.11330781778227 0.012560075274226066 0.04660506274019215 1.8066637550765325e-06 5.743122668082686 -0.1917300878674325 NKPSDLGTK ddPTM_A549_PD325901_60min_R1 2 NKPSDLGTK 9 1 P31948;P31948-2;P31948-3;F5H783 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 74.944 0.0021348 13928500.0 7694.0 9186.5 9461.6 9426.3 11380.599999999999 10612.8 11633.099999999999 10793.900000000001 11310.400000000001 10302.5 10418.8 False True 8475.089215976564 9960.678595024554 10103.721073222834 10008.54114231944 10581.265916938602 10526.372875462619 12075.80398637657 10578.607196849258 10835.063220975497 9651.998391764351 9137.353650214825 0.9275211992891738 1.0901054042917964 1.105760098601994 1.0953435234592384 1.15802302526507 1.1520154826463498 1.3215865827949715 1.1577320526059038 1.1857988248841345 1.0563231720310426 1.0 13.157560678772288 -5.0134439629618015 1.6941968798556497 1.1206191233713256 0.741648054102763 0.3565610698795858 0.07860347709835722 2.236004254355488 3.6611100686876052 0.01377245768796627 1.6755721472357294 9.695183582310526e-06 5.0134439629618015 -0.3789710692685626 NKQDDDLNCEPLS(ph)PHNITPEPVSK ddPTM_A549_MK2206_60min_R1 2 NKQDDDLNCEPLSPHNITPEPVSK 24 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK 154.02 1.0140999999999999e-33 101623000.0 5445.8 7191.0 6710.200000000001 5216.3 9123.4 6639.299999999999 6840.5 6955.0 9628.7 9159.900000000001 9943.599999999999 True False 6364.917902973013 7556.9911847556305 7661.807260521198 6494.293734168606 7781.3599456949 7341.866319189342 8083.330305133807 7940.892548794198 7447.814823874334 7090.672228173166 7474.3296906011665 0.8515703971389945 1.0110593856006123 1.0250828606283962 0.8688797528338978 1.04107796522273 0.9822775584038801 1.0814789606215054 1.0624220334807717 0.9964525425256295 0.9486699840240601 1.0 12.867728486660774 -6.804956784495646 24.999988039798954 1.0108479577758631 0.9504221267313544 0.26786082546311407 0.05972796399396705 159.68377051764068 91735.03587957077 0.00794749053321452 0.015019415453038787 1.5669069811531766e-07 6.804956784495646 -0.060425831044508715 NKQDDDLNCEPLS(ph)PHNITPEPVSK ddPTM_A549_PD325901_60min_R1 3 NKQDDDLNCEPLSPHNITPEPVSK 24 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK 199.3 1.1412999999999997e-61 203210000.0 12050.2 12059.400000000001 14430.8 13247.1 13430.9 13385.7 13144.5 14498.300000000001 10700.1 12512.9 13481.0 True False 13273.527433111623 13075.687960467983 15410.160867449895 14065.343280653053 12487.559918089615 13276.691297214684 13644.721140446396 14209.120032803685 10250.412007600067 11722.833358535127 11822.92246309999 1.1226942809224245 1.1059607302067611 1.3034138484411006 1.1896672184522723 1.0562160038741686 1.12296188515589 1.1540903852691533 1.2018280655355011 0.8669947755804187 0.9915343177731861 1.0 13.529299073430593 -8.757445506231871 24.9999998257149 0.9371919734646696 1.1567602558760643 0.6370400852137421 0.06838831495645484 46.52648358883556 291236.0710237388 0.013060981977266508 0.014544911488376765 1.7480525882450928e-09 8.757445506231871 0.2195682824113947 NKQPT(ph)PVNIR ddPTM_A549_MK2206_60min_R1 2 NKQPTPVNIR 10 1 A0A087X1B7;X6R700;Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 A0A087X1B7 CHTOP Chromatin target of PRMT1 protein 1 NKQPT(1)PVNIR;NKQPT(1)PVNIR 92.295 0.00024672 59103000.0 8064.299999999999 10874.099999999999 11194.3 10315.0 15416.5 12386.3 11967.2 11654.4 17528.199999999997 16015.099999999999 14725.400000000001 True False 9425.356686794456 11427.5452429636 12781.820067427563 12842.175463057953 13148.75327211406 13697.010044639484 14141.485334054129 13306.44689010311 13558.090686783691 12397.277787029994 11068.676779634989 0.8515341873688063 1.0324219841696785 1.154773991679344 1.1602268020587596 1.1879245851957803 1.237456862941405 1.2776129988792095 1.2021714207596472 1.2249061885815402 1.1200325055872504 1.0 13.43419514299129 -5.3729967745010985 2.1966062287113672 1.146414798941597 0.8112439026689193 0.6203799570297903 0.07348325868673898 0.37398324992021353 2.4247071260719024 0.014629382686659146 0.22103617084291996 4.23646112451471e-06 5.3729967745010985 -0.3351708962726776 NKQPT(ph)PVNIR ddPTM_A549_PD325901_60min_R1 2 NKQPTPVNIR 10 1 A0A087X1B7;X6R700;Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 A0A087X1B7 CHTOP Chromatin target of PRMT1 protein 1 NKQPT(1)PVNIR;NKQPT(1)PVNIR 117.03 3.0291e-05 126407000.0 13569.5 13038.599999999999 15329.4 15209.599999999999 18261.2 18259.8 17190.5 19001.7 17533.1 16575.0 16684.5 True False 14947.065650662074 14137.408580970683 16369.745267170672 16149.06244849216 16978.596309719986 18111.098242817403 17844.693884502536 18622.69618695472 16796.244779997654 15528.45167129281 14632.412271759642 1.0215038623200707 0.9661707392058445 1.1187318237857513 1.1036500440641377 1.1603415755643003 1.237738378775151 1.2195319235873743 1.2727017145967292 1.1478794109987032 1.0612366151863089 1.0 13.836880008603554 -5.768918717048724 24.485112332831065 1.116564666054535 0.9938372927113731 0.2976810392948077 0.08029039183374471 151.92784844466235 497375.7372321504 0.014269065381880766 0.04568668704924358 1.7024771157481113e-06 5.768918717048724 -0.12272737334316186 NKQPVTDPLLT(ph)PVEK ddPTM_A549_MK2206_60min_R1 1 NKQPVTDPLLTPVEK 15 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 NKQPVTDPLLT(1)PVEK 117.65 3.2819000000000003e-07 5467500.0 1377.0 1944.1 2283.2 1598.4 2624.7 2095.8 1999.5 1834.2 2823.2 2854.4 2816.0 True False 1609.4039355822529 2043.0463860775174 2606.9920922210977 1990.0080717549024 2238.6101069190663 2317.5761649205524 2362.783268052779 2094.2034670019166 2183.749707723993 2209.5890575331046 2116.7094823537636 0.7603329360969314 0.9651992411380264 1.231624894183468 0.9401422766538702 1.0575896813339496 1.094895725767443 1.1162529802745453 0.9893674519155928 1.0316719067633606 1.0438792266740637 1.0 11.047607558198042 -5.32399778649818 3.961871940516866 1.0357629738675431 0.749911297547689 0.5522256815696669 0.0754679947215385 0.11682433723162128 3.2561029488555997 0.009762562759314537 0.082178842773789 4.7424440237171276e-06 5.32399778649818 -0.2858516763198541 NKQPVTDPLLT(ph)PVEK ddPTM_A549_PD325901_60min_R1 1 NKQPVTDPLLTPVEK 15 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 NKQPVT(0.001)DPLLT(0.999)PVEK 100.92 2.9033999999999996e-06 9459800.0 2264.8 2142.3 2795.1 2570.0 3716.3 3259.2 2897.2 3606.4 2946.6 3033.9 2639.8 True False 2494.720828742362 2322.8391394025025 2984.792294301716 2728.7430631065167 3455.2799085390025 3232.6581557843147 3007.4545314086727 3534.4675228339293 2822.7646490775196 2842.339036231387 2315.1213350709395 1.077576708810348 1.003333650040129 1.2892595515777823 1.1786609288117087 1.4924832907011012 1.3963234266878113 1.2990483418081924 1.5266878108250974 1.219272876249065 1.2277278919138348 1.0 11.17687209150306 -10.013008124393323 1.0183722873945507 1.0273775400430492 1.2794426434389914 0.08346164898206598 0.1633319401498849 0.44488968397686157 0.9313594049415747 0.05857171253080188 0.03102467534457582 9.704918119815474e-11 10.013008124393323 0.25206510339594224 NKRDS(ph)TEITSILLK ddPTM_A549_PD325901_60min_R1 2 NKRDSTEITSILLK 14 2 Q8IYU2-3;Q8IYU2-4;Q8IYU2 Q8IYU2-3 HACE1 E3 ubiquitin-protein ligase HACE1 1 NKRDS(0.767)T(0.227)EIT(0.003)S(0.003)ILLK;NKRDS(0.644)T(0.354)EIT(0.001)S(0.001)ILLK 60.763999999999996 0.0014088 12660700.0 2616.0 3213.6000000000004 3865.0 3347.2 4035.3999999999996 3951.3 3598.2 4033.8 4050.2 3410.3999999999996 3849.5 True False 2881.574394202586 3484.4213501301792 4127.302142133068 3553.9489419572483 3751.9674253742382 3919.121922849338 3735.1314700105913 3953.3426945451192 3879.984178949897 3195.066761977496 3376.035903991054 0.8535378402806885 1.032104352329605 1.2225291020317313 1.0526987991318073 1.1113529393863284 1.1608650009368273 1.1063660388193812 1.1710013776428116 1.149272190607656 0.9463959664055641 1.0 11.721114531786096 -5.328644869802042 3.675541814682357 1.0967249012021938 0.8420237304085718 0.47202351568020173 0.07579491197802071 0.15244633802118973 3.4990859259752396 0.010157372021181815 0.09200716004984132 4.691968958335856e-06 5.328644869802042 -0.254701170793622 NKRDST(ph)EITSILLK ddPTM_A549_MK2206_60min_R1 1 NKRDSTEITSILLK 14 2 Q8IYU2-3;Q8IYU2-4;Q8IYU2 Q8IYU2-3 HACE1 E3 ubiquitin-protein ligase HACE1 1 NKRDS(0.442)T(0.539)EIT(0.009)S(0.01)ILLK 59.434 0.0028236 3922700.0 1062.4 1202.7 1480.5 1547.1 1496.8 1399.6 1369.4 1409.1 2120.7 1586.3 1575.4 True False 1241.7071468137879 1263.9122928529555 1690.4571621116563 1926.1395694519572 1276.6227027989707 1547.70474302071 1618.2022541992885 1608.844240187765 1640.3648360620127 1227.9537282668032 1184.1847011719183 1.0485755689842498 1.0673269901242057 1.427528290509673 1.6265533303595034 1.0780604592641434 1.3069791743543362 1.3665117042956632 1.3586092090157778 1.3852271815694288 1.0369613178177097 1.0 10.209678405056982 -10.83025884371897 1.0544075804505988 0.9984279358280937 1.3056548833025887 0.28883143691096036 0.1670044328169575 0.5312246671485948 1.0397674866714255 0.1214164082947811 0.029312496499411554 1.478227087896035e-11 10.83025884371897 0.30722694747449497 NKS(ph)NEDQSMGNWQIK ddPTM_A549_MK2206_60min_R1 5 NKSNEDQSMGNWQIK 15 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 NKS(0.977)NEDQS(0.023)MGNWQIK;NKS(0.999)NEDQS(0.001)MGNWQIK;NKS(0.84)NEDQS(0.16)MGNWQIK;NKS(0.999)NEDQS(0.001)MGNWQIK;NKS(0.874)NEDQS(0.126)MGNWQIK 157.79 4.5059e-20 108105800.0 17683.4 19343.9 18333.1 14532.6 26170.1 19298.8 18102.9 18278.399999999998 27769.9 28022.5 28727.2 True False 20667.925602378535 20328.421885522795 20933.00925275867 18093.087652393213 22320.51295732183 21340.986206493355 21391.962602266907 20869.419175252322 21480.061989417874 21692.197787528523 21593.443409614025 0.9571389430727189 0.9414164058925403 0.9694150606585835 0.8378972871152939 1.0336708478548675 0.9883086176515845 0.9906693525657232 0.9664701816830499 0.9947492663376852 1.0045733501619538 1.0 14.398305701365507 -6.804002888442512 24.999999950402323 0.9959286848014692 0.9306016975201225 0.4839498422017231 0.03489272985223729 88.41513655277392 51931.04310225439 0.004603007567967305 0.008698911283552432 1.570352360066382e-07 6.804002888442512 -0.06532698728134678 NKS(ph)NEDQSMGNWQIK ddPTM_A549_PD325901_60min_R1 4 NKSNEDQSMGNWQIK 15 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 NKS(0.991)NEDQS(0.009)MGNWQIK;NKS(1)NEDQSMGNWQIK;NKS(0.907)NEDQS(0.093)MGNWQIK;NKS(0.89)NEDQS(0.11)MGNWQIK 183.06 8.595900000000001e-34 173281900.0 23443.9 18986.8 19240.6 22236.4 22310.699999999997 22998.5 18436.800000000003 18193.899999999998 28433.8 25639.6 30279.4 True False 25823.907469512997 20586.884270180402 20546.382819126906 23609.89192547151 20743.67339973659 22811.207841128376 19138.422513004065 17831.00839166155 27238.82626720302 24020.711280318494 26555.22575693122 0.9724604756098773 0.7752479477530704 0.7737227695668926 0.8890864698941245 0.7811522142425114 0.8590101266668534 0.7207026853465449 0.6714689061533379 1.025742598331832 0.9045568469343105 1.0 14.696708173978141 -8.784115736242086 24.990452907611246 1.0121562670880373 0.804249230670213 0.4383226353746661 0.08383871126926956 108.53645618585155 119611.94603937709 0.012998776086105227 0.013842906460344386 1.643933568793296e-09 8.784115736242086 -0.20790703641782426 NKS(ph)PAAVTEPETNK ddPTM_A549_MK2206_60min_R1 2 NKSPAAVTEPETNK 14 1 B7ZBC9;B7ZBC8;O75449 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 NKS(0.988)PAAVT(0.01)EPET(0.001)NK;NKS(1)PAAVTEPETNK 110.74 2.9419e-06 18865100.0 5710.4 6637.6 6202.3 5431.9 7889.5 7092.3 6788.6 6761.9 8812.9 8351.6 9385.1 True False 6674.175914124109 6975.425488518147 7081.87940328614 6762.7157438472605 6728.965001157452 7842.802478512282 8022.0007469382845 7720.4200324502535 6816.79222130943 6464.967759561896 7054.520654417017 0.9460849632561832 0.9887880169647889 1.003878186798134 0.9586357564369664 0.9538514848552146 1.111741373044489 1.1371432787450275 1.0943932849096274 0.9663012634375464 0.9164290638959308 1.0 12.784332341547014 -4.90253649809993 0.8120636973564472 1.009037420718909 0.880485804658846 0.08507358842165824 0.06743282470596623 9.861836281218507 3.167663606046272 0.011064878199322963 1.3056598293014379 1.2515940846689019e-05 4.90253649809993 -0.12855161606006305 NKS(ph)PAAVTEPETNK ddPTM_A549_PD325901_60min_R1 2 NKSPAAVTEPETNK 14 1 B7ZBC9;B7ZBC8;O75449 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 NKS(0.944)PAAVT(0.056)EPETNK;NKS(0.988)PAAVT(0.012)EPETNK 126.14 9.558e-08 27348000.0 7975.5 7337.2 9020.400000000001 9655.9 10479.2 9332.0 9627.8 9373.5 10509.4 9974.8 10059.3 True False 8785.16688874722 7955.531593905637 9632.578588071703 10252.323012860006 9743.177143277422 9256.003286014735 9994.191197534308 9186.538189131501 10067.726465422958 9344.989425689982 8822.069871156571 0.9958169700593731 0.9017760809077189 1.091872851694936 1.1621221734345581 1.1044094283510921 1.0491872566410851 1.1328623943695961 1.0413132431841812 1.1411977701898526 1.0592740209690559 1.0 13.106901471341583 -5.770926558195451 24.925616902582245 1.079612613721624 0.9487965221643494 0.5253753339130256 0.050242614145000995 121.15783518215751 318320.85506258236 0.008443188774895574 0.02675455850763045 1.6946243473705131e-06 5.770926558195451 -0.13081609155727458 NKS(ph)PAAVTEPETNKFDSTGYDKDLVEALER ddPTM_A549_MK2206_60min_R1 1 NKSPAAVTEPETNKFDSTGYDKDLVEALER 30 3 B7ZBC9;B7ZBC8;O75449 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 NKS(1)PAAVTEPETNKFDSTGYDKDLVEALER 133.66 2.6037999999999997e-28 7772000.0 1694.3 1886.9 2388.3 1749.8 2592.7 2205.5 2448.3 1896.2 3184.0 3243.7 2714.4 True False 1980.256418342056 1982.9351503984697 2726.996852597954 2178.501078551508 2211.317264528922 2438.8845461075866 2893.1244186914837 2164.9921568689524 2462.829083803202 2510.94591715251 2040.3395663711142 0.9705523781338415 0.9718652635478994 1.3365406903558252 1.0677149600280131 1.0837986485072695 1.1953326722204933 1.4179622188266958 1.0610940416744168 1.2070682372657777 1.2306509948333757 1.0 10.99459355938436 -4.160067006635766 13.906684662094435 1.1202364487155678 0.5092111906201366 0.0 0.1437355244770706 0.0 0.0 0.018844001266057182 0.0 6.91724237603641e-05 4.160067006635766 -0.6110252580954312 NKS(ph)PPADPPR ddPTM_A549_MK2206_60min_R1 1 NKSPPADPPR 10 1 O60566;O60566-3;O60566-2 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 NKS(1)PPADPPR 46.88 0.009558200000000001 16368000.0 1235.0 1586.7 907.32 1274.2 1939.9 1059.2 1130.8 1085.2 1587.0 1729.5 1862.2 True False 1443.4378071489346 1667.4562526563432 1035.9916192685903 1586.379057201012 1654.5432797699916 1171.2838409599437 1336.2517226877142 1239.0304232856176 1227.5470339182411 1338.804748810083 1399.764345894596 1.0312005812852925 1.191240695297653 0.7401185937526384 1.1333186631405086 1.1820155904260907 0.8367721641112174 0.9546262030511352 0.885170726715251 0.8769669248388449 0.9564501001448544 1.0 10.450968250671151 -7.273081865195282 24.948593291869734 0.930310603848095 1.0499089120689162 0.23883796057384032 0.12078072724041412 941.6388698260298 2017828.310517706 0.017883474534078125 0.02872652206391589 5.332343704929214e-08 7.273081865195282 0.11959830822082118 NKS(ph)PPADPPR ddPTM_A549_PD325901_60min_R1 3 NKSPPADPPR 10 1 O60566;O60566-3;O60566-2 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 NKS(1)PPADPPR;NKS(1)PPADPPR;NKS(1)PPADPPR 76.07300000000001 0.00041799 37492700.0 11168.900000000001 11943.100000000002 11094.4 11258.5 15051.6 12778.8 11531.6 12663.300000000001 13677.3 13734.499999999998 14233.900000000001 True False 12302.758505890397 12949.586951313095 11847.332700046862 11953.911975091323 13994.427541201092 12674.73368959763 11970.441348333641 12410.720547333327 13102.49064509196 12867.301326055573 12483.22053612632 0.9855436319727214 1.0373594629556624 0.9490605942401478 0.9575983970239744 1.1210590649024708 1.01534164624562 0.9589225243350703 0.9941922047613291 1.049608200638087 1.0307677645218016 1.0 13.607702561514477 NKSNEDQS(ph)MGNWQIK ddPTM_A549_PD325901_60min_R1 1 NKSNEDQSMGNWQIK 15 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 NKS(0.392)NEDQS(0.608)MGNWQIK 117.67 1.8832e-07 147590000.0 5463.4 4725.5 5494.6 5449.8 4669.6 4792.6 4997.5 4801.4 6789.7 5538.6 6543.3 True False 6018.040346057492 5123.734469143694 5867.49659771393 5786.4217686061875 4341.623405245465 4753.570654581464 5187.682597236929 4705.6323103745635 6504.352520817766 5188.891850776612 5738.515581396195 1.0487102911365256 0.8928675711458253 1.0224763729379565 1.008348184566284 0.7565760419507543 0.8283624200641987 0.9040112418715004 0.8200086317844714 1.1334555824688102 0.9042219677155852 1.0 12.48646187865009 -8.765532555611783 24.999992146824283 1.0630206917881284 0.9085574694690023 0.11740496679871582 0.10196506728173735 86.44182888449353 527961.3391616811 0.016938226304132595 0.01835430832758197 1.7158030851552868e-09 8.765532555611783 -0.15446322231912613 NKSS(ph)SPEDPGAEV ddPTM_A549_MK2206_60min_R1 1 NKSSSPEDPGAEV 13 1 Q9Y5U2-2;Q9Y5U2 Q9Y5U2-2 TSSC4 Protein TSSC4 1 NKS(0.139)S(0.511)S(0.35)PEDPGAEV 44.426 0.050198 3498900.0 1818.6 2060.2 1882.0 2006.1 2286.1 1839.3 1603.2 1729.8 3172.2 2808.5 3108.4 True False 2125.535219498828 2165.0553801743217 2148.8958994219092 2497.59459005725 1949.8177183783587 2033.9335051714722 1894.4806878430693 1975.0044472903246 2453.7017649624713 2174.057899412039 2336.498492524306 0.9097096472775561 0.9266239148458595 0.919707804775977 1.0689476573806385 0.8345041627961055 0.8705049507539169 0.8108204194886128 0.8452838525723033 1.0501619294055444 0.930476910799643 1.0 11.190132391058718 -8.769386887203703 24.999731629353768 1.023687584232976 0.8996472031356315 0.23428455429860284 0.07121208276530513 128.66980573273992 404743.51027263206 0.011986408956896066 0.012872135409868144 1.700642831517912e-09 8.769386887203703 -0.1240403810973445 NLAANDLS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 NLAANDLSPSR 11 0 Q96CB9-4;Q96CB9 Q96CB9-4 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 1 NLAANDLS(0.997)PS(0.003)R;NLAANDLS(0.976)PS(0.024)R 131.06 1.7283e-13 7290900.0 2364.0 2178.4 2268.5 2290.0 3126.3 2853.5 1983.2 3111.5 3181.0 3208.5 3426.9 True False 2762.985405749053 2289.2712553013016 2590.207411178853 2851.050102802008 2666.425411384568 3155.4554759999996 2343.5217690433965 3552.564653569111 2460.5085790131857 2483.697621599974 2575.9061523714913 1.072626579662201 0.8887246350934404 1.0055519331689142 1.1068144311768529 1.0351407441337648 1.2249885241723384 0.9097853844115588 1.3791514299923022 0.9552011732834034 0.9642034587763897 1.0 11.330864317565469 NLALDEAGQRS(ph)TM ddPTM_A549_MK2206_60min_R1 1 NLALDEAGQRSTM 13 1 Q53TN4-3;Q53TN4 Q53TN4-3 CYBRD1 Cytochrome b reductase 1 1 NLALDEAGQRS(0.5)T(0.5)M 99.927 0.00012934 6155500.0 1851.1 2045.0 2539.5 2434.0 2885.1 1930.7 1842.5 1796.7 3111.4 2933.5 3121.8 True False 2163.520424950115 2149.0817650987715 2899.6392861753143 3030.3301092664137 2460.705611868859 2135.005392505063 2177.2584002936965 2051.3877271629826 2406.6728678848244 2270.8203125957675 2346.57090270312 0.9219923516727575 0.9158392625695427 1.235692168020617 1.2913865529380089 1.048638934810903 0.9098405635413167 0.9278468414423853 0.8742065815270689 1.0256126781050896 0.9677186016326667 1.0 11.196338337371232 -7.003422936706466 24.98153808867454 0.9871448582765237 1.099142981264139 0.21938232725725115 0.11475489315142669 210.82377534731907 1538671.6517122898 0.01772028889229984 0.033012592025484 9.921493753587342e-08 7.003422936706466 0.11199812298761525 NLALDEAGQRST(ph)M ddPTM_A549_MK2206_60min_R1 2 NLALDEAGQRSTM 13 1 Q53TN4-3;Q53TN4 Q53TN4-3 CYBRD1 Cytochrome b reductase 1 1 NLALDEAGQRS(0.233)T(0.767)M;NLALDEAGQRS(0.23)T(0.77)M 122.33 3.1537999999999998e-06 48166000.0 13538.099999999999 17332.5 17336.1 16074.9 18351.4 15494.599999999999 12821.4 14198.599999999999 20905.7 22811.0 19445.1 True False 15823.00030523319 18214.650216906826 19794.61966098203 20013.251221629685 15651.933369952576 17134.228287516937 15150.882417110235 16211.295031388841 16170.59232954289 17657.979257072468 14616.345012541608 1.0825552004729095 1.246183652703715 1.354279722050703 1.3692377406565899 1.0708513897641563 1.172264904311909 1.0365712087467809 1.1091209886930475 1.1063362499768346 1.208098142314031 1.0 13.835294973225752 -6.782476583352342 24.016965424414096 1.0653544703204394 1.2683736918082988 0.38610710871633747 0.09200041142330354 84.07916569123732 95988.22782999415 0.012577582094983386 0.023789583206341863 1.6501499730672616e-07 6.782476583352342 0.20301922148785945 NLALDEAGQRST(ph)M ddPTM_A549_PD325901_60min_R1 2 NLALDEAGQRSTM 13 1 Q53TN4-3;Q53TN4 Q53TN4-3 CYBRD1 Cytochrome b reductase 1 1 NLALDEAGQRS(0.26)T(0.74)M;NLALDEAGQRS(0.097)T(0.903)M 112.5 1.3642e-05 95209000.0 16430.1 18131.6 16500.1 19609.6 19767.4 21365.1 18780.6 19928.4 18107.5 17930.1 20823.1 True False 18098.07165679966 19659.613564855725 17619.896009161665 20820.840455367146 18379.006017827913 21191.109709176326 19495.306010138644 19530.91242847263 17346.504745527447 16797.99042602998 18261.990708506582 0.9910240315897999 1.0765317910110488 0.9648398299181138 1.1401188834067597 1.0064075878248488 1.1603942881925429 1.0675345487421353 1.069484304324773 0.949869322704633 0.9198334778587606 1.0 14.15655641917331 -8.753782028643908 24.9938154414647 0.9763271794150075 1.0614944321329831 0.3654512494596147 0.058840418538351306 142.45469926599267 464975.35073958087 0.009082952837927726 0.01020404503060359 1.762860599911258e-09 8.753782028643908 0.08516725271797565 NLALS(ph)RESLVV ddPTM_A549_MK2206_60min_R1 1 NLALSRESLVV 11 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 NLALS(0.687)RES(0.313)LVV 55.261 0.014431999999999999 5663400.0 758.99 782.11 607.36 817.95 988.09 1016.7 773.81 778.51 1027.3 1164.0 1484.4 True False 887.0889564760889 821.9160583380929 693.4927808038743 1018.3477867191708 842.7432699149082 1124.2865191691606 914.4012606411204 888.8661765868839 794.6181902610011 901.0515915668901 1115.7825126441503 0.7950375153074323 0.7366274780470784 0.6215304263556295 0.9126758800923656 0.7552934916660404 1.0076215628302487 0.8195156764683449 0.7966303168531236 0.7121622549702246 0.8075512757693282 1.0 10.123840130370908 -10.929549026828575 1.1507567549058657 1.0015816118661884 0.7903709258987996 0.029115033486191377 0.11091979074016438 0.42277638070685375 0.9824863488232999 0.07182616627455597 0.016390340209095584 1.1761182070352366e-11 10.929549026828575 -0.2112106859673888 NLALS(ph)RESLVV ddPTM_A549_PD325901_60min_R1 1 NLALSRESLVV 11 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 NLALS(0.939)RES(0.061)LVV 71.085 0.0022412 2427900.0 884.79 795.61 634.31 1226.9 1140.8 998.68 1010.2 936.3 921.78 1043.3 1323.3 True False 974.613229452028 862.6588468935375 677.3580910158926 1302.6828265079314 1060.6741435463473 990.5470811912982 1048.643713802651 917.6247619868591 883.0407921762973 977.4258599493077 1160.5424890898464 0.8397910792704943 0.7433237946937008 0.5836564342828237 1.1224774954422896 0.9139468425479013 0.8535207375027977 0.9035806303180233 0.7906860546799152 0.7608862238803688 0.8422146273298897 1.0 10.180583627402287 -10.946538758683886 1.2057241770097489 1.0000673440420107 0.8298254737483215 0.010258431562423898 0.13335879101768283 0.6412525807158223 1.6560801867724184 0.09002065989959435 0.020999214226740358 1.1309964488617565e-11 10.946538758683886 -0.1702418702936892 NLALSRES(ph)LVV ddPTM_A549_PD325901_60min_R1 2 NLALSRESLVV 11 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 NLALS(0.038)RES(0.962)LVV;NLALS(0.004)RES(0.996)LVV 77.593 0.00093673 4808300.0 1430.46 1886.6799999999998 1773.2800000000002 1652.35 2191.1 2294.8 1837.63 2147.7 2181.7 2346.8999999999996 2218.5 True False 1575.6792461510058 2045.6771449040352 1893.625444398894 1754.411906740877 2037.2046948846446 2276.111909638517 1907.5620152397194 2104.862438661945 2090.010736066118 2198.7163334755396 1945.6385642301996 0.8098519813079621 1.0514168368745387 0.973266812866713 0.9017152203883344 1.0470622510973273 1.169853410332186 0.9804297932357517 1.0818363067832915 1.0742029760769263 1.1300744001985135 1.0 10.926028014296499 -6.777304214241466 24.708317548653177 1.0462561347182378 0.9452454496347005 0.4010257174633678 0.07574237870947999 186.94161865137156 291147.6696545692 0.010076131468088318 0.0190885811248497 1.6699204600139122e-07 6.777304214241466 -0.10101068508353728 NLAPHHAS(ph)PDPPAPPASASDPHR ddPTM_A549_PD325901_60min_R1 1 NLAPHHASPDPPAPPASASDPHR 23 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 NLAPHHAS(1)PDPPAPPASASDPHR 77.065 0.00011136 20008000.0 1789.1 1969.5 2224.0 1936.5 2354.2 1956.5 2109.4 1809.5 3056.3 2077.1 2776.6 True False 1970.728114934192 2135.47667696085 2374.9340139984315 2056.1132068894044 2188.849113549099 1940.5669126755076 2189.6743713079695 1773.4081029747122 2927.8543395695465 1945.9515515198968 2435.0958023175904 0.8093020870302357 0.8769579722195819 0.975293872108892 0.8443664536452771 0.8988759750092267 0.7969160436433682 0.8992148765662352 0.728270362622645 1.2023569408575119 0.7991273072984837 1.0 11.249762817055798 -8.765016342058871 24.99998164462214 1.0955574446224003 0.8593072702609612 0.11659226702678882 0.11643106709536451 45.91557439520019 320910.65824919724 0.015548255277680303 0.016873244799767727 1.7178437452314906e-09 8.765016342058871 -0.23625017436143914 NLAPT(ph)PR ddPTM_A549_MK2206_60min_R1 2 NLAPTPR 7 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NLAPT(1)PR;NLAPT(1)PR 110.76 0.0087999 83156000.0 3300.6 3764.0 4494.200000000001 4104.1 6238.4 4741.2 4205.0 4568.700000000001 6172.0 5323.5 5127.6 True False 3857.660588077549 3955.571522656124 5131.545138778934 5109.60468424005 5320.73962395851 5242.910637046153 4968.994069598371 5216.3272160569495 4774.051854658715 4120.91765266868 3854.2754054393317 1.0008782928779403 1.0262814943306435 1.331390364979384 1.3256978671085984 1.3804772789328017 1.3602843817665742 1.2892161423093682 1.3533872563168234 1.238637967572673 1.0691809015134337 1.0 11.91224394707565 -10.327447039024763 0.8378344416866365 1.008312386141482 1.2628045099221086 0.31430630575489016 0.12444807361827827 0.5127869539907818 0.6838924678377737 0.07382166271230813 0.025933542396907757 4.70492777482037e-11 10.327447039024763 0.2544921237806266 NLAPT(ph)PR ddPTM_A549_PD325901_60min_R1 2 NLAPTPR 7 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NLAPT(1)PR;NLAPT(1)PR 81.97200000000001 0.01608 111463000.0 9921.3 9522.8 9299.1 11343.2 14266.0 11417.5 13639.7 12432.3 12788.7 12793.9 12807.5 True False 10928.50307232497 10325.319776269505 9930.192846030945 12043.843701723676 13264.00537502822 11324.519665460055 14158.766247430229 12184.328023549317 12251.235412902228 11986.090970579371 11232.258693431726 0.9729568531675304 0.9192558734698151 0.8840780039937837 1.0722548358654291 1.1808849615246662 1.0082139286982663 1.2605448853942292 1.084762055086421 1.0907187723575462 1.0671131513013017 1.0 13.455360447818201 -6.271504749134471 23.99021017693071 1.0712022502479297 0.9248128078531678 0.48705298764639515 0.07477777267370672 294.8193795177947 702685.5897519785 0.011354647279400689 0.02669378830665213 5.351743014551149e-07 6.271504749134471 -0.14638944239476193 NLAT(ph)SLAELR ddPTM_A549_PD325901_60min_R1 1 NLATSLAELR 10 0 Q9Y4G6;A0A1B0GVU7 Q9Y4G6 TLN2 Talin-2 1 NLAT(0.5)S(0.5)LAELR 51.092 0.027411 1441600.0 398.67 348.98 511.6 570.77 364.4 288.83 537.3 398.89 336.43 483.45 273.94 True False 439.142684914658 378.38976934541654 546.3202525007189 606.0251665872787 338.80580111175396 286.47786424128134 557.7472455218413 390.9338260268486 322.29101706683986 452.9248844939069 240.247116648736 1.8278791064815405 1.575002333529181 2.2739929624191526 2.522507554058785 1.410238781792 1.1924299789209918 2.321556459457203 1.6272154749662648 1.3414979607770268 1.8852458702183965 1.0 7.908375306220028 -8.956136614542617 0.538035892315885 1.0169674818920575 1.935174840885797 0.03566714313718644 0.4603171490568947 0.5157209251458242 0.346187677699195 0.156712357196185 0.1312011569171013 1.1062757318318145e-09 8.956136614542617 0.9182073589937394 NLATS(ph)ADTPPSTVPGTGK ddPTM_A549_MK2206_60min_R1 1 NLATSADTPPSTVPGTGK 18 0 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 1 NLAT(0.138)S(0.85)ADT(0.01)PPS(0.001)T(0.002)VPGTGK 106.94 4.419800000000001e-09 4742700.0 832.94 1249.8 1321.9 1328.1 1752.7 1393.2 1288.3 1406.1 2246.2 1935.8 1974.1 True False 973.5199085721727 1313.4094816725894 1509.36529726133 1653.4845596206742 1494.8801517876498 1540.6274992686872 1522.3674339746924 1605.4189810006499 1737.4392864443307 1498.5014355285111 1483.8764876117073 0.6560653239671239 0.8851204885566428 1.017177177388023 1.1143006668175937 1.0074154852292678 1.0382451047177925 1.0259394543173443 1.0819087669382543 1.1708786418206085 1.009855906498217 1.0 10.53515529702118 -5.332100600787408 1.451970359518214 1.0728068615108384 0.522205728594682 0.8414924008889348 0.05135723663894711 0.34536873001382606 0.7167351308221067 0.009520693447849516 0.2631039008544649 4.654782567782479e-06 5.332100600787408 -0.5506011329161564 NLATS(ph)ADTPPSTVPGTGK ddPTM_A549_PD325901_60min_R1 2 NLATSADTPPSTVPGTGK 18 0 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 1 NLAT(0.041)S(0.959)ADTPPSTVPGTGK;NLAT(0.035)S(0.965)ADTPPSTVPGTGK 200.67 1.0325e-48 11038200.0 3092.4 3480.1 3627.2 3550.7 4160.6 4122.4 3939.6 4238.1 4259.9 4821.0 4482.6 True False 3406.3381714954407 3773.380240412013 3873.363604125499 3770.0186747752145 3868.373809290792 4088.8285411773627 4089.5236338318373 4153.56777077487 4080.8712172012947 4516.601237242994 3931.2686175426143 0.8664730149181968 0.9598378049197525 0.985270654577323 0.9589827207309495 0.984001396401364 1.040078646097004 1.0402554573816292 1.0565464166554999 1.0380545351165027 1.1488915351875049 1.0 11.940779228926905 -3.551249324927651 0.5338785350795119 1.0230070997124574 2.1892282970740957e-09 0.5760387589419691 0.04437038990814567 7.370428760867998 0.33752052714067543 0.004843946970323826 7.067836921732101 0.0002810287004302781 3.551249324927651 -1.023007097523229 NLATSADT(ph)PPSTVPGTGK ddPTM_A549_MK2206_60min_R1 3 NLATSADTPPSTVPGTGK 18 0 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 1 NLATSADT(0.992)PPS(0.003)T(0.005)VPGTGK;NLAT(0.001)S(0.005)ADT(0.658)PPS(0.168)T(0.168)VPGTGK;NLATS(0.001)ADT(0.986)PPS(0.005)T(0.008)VPGTGK 173.87 2.0692999999999998e-30 11670700.0 2912.5000000000005 3218.1299999999997 3204.5 3072.63 4018.72 2979.62 3318.17 3548.0899999999997 5091.9 4615.58 5003.2 True False 3404.0587962115574 3381.9190712554087 3658.9462857053745 3825.4244879356033 3427.5716115661935 3294.9214106883164 3921.038537911826 4051.0426230699063 3938.5927800934433 3572.9172723404713 3760.7673587046706 0.9051500588922429 0.8992630356216053 0.972925452896303 1.0171925362735552 0.9114021912662951 0.876130081022399 1.0426166162169515 1.077185115876249 1.0472843450359082 0.9500500646684774 1.0 11.876811348598423 -7.779031398785522 24.968939405456513 1.029266111957386 0.9339533275069429 0.49074715622731435 0.046965695305769356 145.16490485309734 206036.8330376084 0.007020237965986889 0.009711588844477313 1.663292392685064e-08 7.779031398785522 -0.09531278445044311 NLATSADT(ph)PPSTVPGTGK ddPTM_A549_PD325901_60min_R1 2 NLATSADTPPSTVPGTGK 18 0 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 1 NLATS(0.003)ADT(0.989)PPS(0.003)T(0.005)VPGTGK;NLATSADT(0.993)PPS(0.003)T(0.003)VPGTGK 214.5 1.4222e-55 25892000.0 3387.9 3694.3999999999996 3999.4 3733.9 4508.3 4146.4 4724.0 4706.0 3885.6 3716.8 3780.8 True False 3731.837113959841 4005.7400534979256 4270.823334345921 3964.5345226978316 4191.652560790672 4112.633093134539 4903.774405071988 4612.135138214421 3722.301744537979 3482.1206136869455 3315.7855684658716 1.1254760107079138 1.2080817564301296 1.2880276019543448 1.1956546769494867 1.2641506738718455 1.2403193777809185 1.478917832235104 1.3909630291166075 1.122600260987381 1.0501645965296944 1.0 11.695134995562759 -9.011153386398496 3.3429828140877342 1.0489586050847213 1.2747673152262082 0.5222481536461941 0.09305522738384375 0.13822224025781185 3.1771866067609293 0.018937233488051958 0.01911880417820679 9.746453465762669e-10 9.011153386398496 0.22580871014148696 NLDADLVRDRT(ph)PPHLLYSDRDR ddPTM_A549_MK2206_60min_R1 1 NLDADLVRDRTPPHLLYSDRDR 22 3 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 NLDADLVRDRT(1)PPHLLYSDRDR 83.21600000000001 1.4524e-05 4899500.0 364.16 575.37 429.8 421.7 558.97 709.62 598.34 356.43 700.7 772.7 626.3 True False 425.6213051427988 604.6538753960298 490.752102854164 525.0165189308323 476.7462534630816 784.7115173923668 707.0506329615907 406.9550440210953 541.9925687879718 598.1465333365436 470.77242499934744 0.9040914092268442 1.284386772221988 1.0424402042129894 1.1152236007271668 1.012689418807277 1.6668595604202063 1.5018947487473822 0.864441123588875 1.1512835926801004 1.2705640805902612 1.0 8.878886008278153 -9.899717051984075 0.7249385317092519 1.0139398374346105 1.187763457275136 0.0 0.24123745745627184 1.3301610384670886 1.4363371655851924 0.10994191608180807 0.05060966739785977 1.2597458839051123e-10 9.899717051984075 0.17382361984052563 NLDIERPTYTNLNR ddPTM_A549_MK2206_60min_R1 4 NLDIERPTYTNLNR 14 1 Q9BQE3;F5H5D3;F8VQQ4;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2;C9JDS9;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ;;; 152.34 8.560499999999999e-14 62891200.0 5199.740000000001 6548.400000000001 6335.3 6481.0 8773.300000000001 7063.5 7194.6 6990.299999999999 10801.199999999999 9123.9 8885.199999999999 False True 6077.328990562433 6881.685589522148 7233.74080319215 8068.845290943148 7482.759191920237 7810.954881628174 8501.765691589166 7981.196431895921 8354.745445972085 7062.804653176249 6678.759620955137 0.9099487532826205 1.030383780834141 1.083096445108717 1.2081353048890258 1.1203815703207056 1.1695217862192082 1.272955784321718 1.1950117813574672 1.2509426780024258 1.0575024486606976 1.0 12.705364474957454 -5.4975536809695615 1.5926904928187584 1.1457876021032742 0.8813269506634048 0.4894938872469682 0.07712373779240339 0.6044003166578259 1.997890862450545 0.014722067051079726 0.2142040239639359 3.1801405827574604e-06 5.4975536809695615 -0.2644606514398694 NLDIERPTYTNLNR ddPTM_A549_PD325901_60min_R1 2 NLDIERPTYTNLNR 14 1 Q9BQE3;F5H5D3;F8VQQ4;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2;C9JDS9;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ; 198.16 2.7116e-31 103581000.0 5599.1 5221.4 5411.4 6016.1 6614.1 5593.0 6028.0 6125.0 6254.3 6878.599999999999 6278.9 False True 6167.516510160437 5661.425702504892 5778.65014539169 6387.700833445574 6149.548433406293 5547.452462353238 6257.398838648167 6002.83207003045 5991.4535209141195 6444.284022090783 5506.635105226503 1.1200154708465562 1.0281098337406582 1.0493976875110191 1.1600007466234374 1.1167524842111989 1.0074123954732346 1.136338021146361 1.0901089241110224 1.0880425897890822 1.1702762029709088 1.0 12.426955296760525 -10.577642606101504 0.7434278053457165 0.9962676073321172 1.0879541427935977 0.0 0.06662429697891037 0.6578627583615839 0.611902064578233 0.03555540874421911 0.008453193920257696 2.6445841693816153e-11 10.577642606101504 0.09168653546148053 NLDSATS(ph)PQNGDQQNGYGDLFPGHKK ddPTM_A549_PD325901_60min_R1 2 NLDSATSPQNGDQQNGYGDLFPGHKK 26 1 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 NLDS(0.011)AT(0.091)S(0.898)PQNGDQQNGYGDLFPGHKK;NLDS(0.004)AT(0.118)S(0.878)PQNGDQQNGYGDLFPGHKK 144.12 7.0121e-33 16223900.0 3841.2 3504.2 3577.0 4011.7 5129.1 4710.3 3981.9 4763.2 4860.5 4217.9 4928.1 True False 4231.155796258018 3799.5112319909704 3819.756730248377 4259.493597768255 4768.849710434407 4671.940878494986 4133.433383479285 4668.194239341889 4656.230087844051 3951.5810741686846 4321.974941799796 0.9789866561549386 0.8791145907034674 0.8837989071398269 0.9855433349630848 1.103395964727301 1.0809736153975602 0.9563760639847678 1.0801067341213961 1.0773385201315075 0.9142998576764378 1.0 12.077474992341699 -6.486246693171521 4.977911378227734 1.0419787433939358 0.9125138662357385 0.4082154158998257 0.06018605634198462 0.10838238874209762 6.615097637264121 0.006976306345596032 0.016111043236647082 3.2640237250505386e-07 6.486246693171521 -0.12946487715819732 NLEEEENLGKGEYQESLRS(ph)LEEEGQELPQSADVQR ddPTM_A549_PD325901_60min_R1 2 NLEEEENLGKGEYQESLRSLEEEGQELPQSADVQR 35 2 P48681 P48681 NES Nestin 1 NLEEEENLGKGEYQES(0.15)LRS(0.85)LEEEGQELPQSADVQR;NLEEEENLGKGEY(0.007)QES(0.051)LRS(0.942)LEEEGQELPQSADVQR 137.68 1.8015e-30 31292000.0 2335.5 1087.9 2407.1 1948.3600000000001 3458.3 2463.46 2866.4 3171.1 2493.5 2649.7 2974.9 True False 2572.5982406957723 1179.5811509853827 2570.460281068178 2068.705772153391 3215.4009384873207 2443.3983985175605 2975.4824205542654 3107.8499228201754 2388.7068663798254 2482.3974897993694 2609.0061594448593 0.9860452921441804 0.45211895982505934 0.9852258384913576 0.7929095010621084 1.232423667091491 0.936524580316615 1.1404658474196108 1.191200684432826 0.9155619881281121 0.9514724527624613 1.0 11.349284634792946 -6.147771616852919 2.1140436809302536 1.001112907377091 0.7324685834264034 0.2676494686241454 0.17338870709116216 0.30792161575727145 2.6314323517141736 0.022904106370030992 0.0806814894556451 7.115876190200822e-07 6.147771616852919 -0.2686443239506876 NLEELEEKS(ph)TTPPPAEPVSLPQEPPKPR ddPTM_A549_MK2206_60min_R1 2 NLEELEEKSTTPPPAEPVSLPQEPPKPR 28 2 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.376)T(0.312)T(0.312)PPPAEPVS(0.001)LPQEPPKPR;NLEELEEKS(0.375)T(0.313)T(0.313)PPPAEPVSLPQEPPKPR 76.476 2.3398e-06 9517900.0 1024.69 1610.73 1435.49 1727.1100000000001 2045.89 1076.45 1045.66 993.1099999999999 1864.67 2190.58 1950.18 True False 1197.6326207347715 1692.709277015914 1639.0640673013593 2150.252027532913 1744.9422911740949 1190.3592245103207 1235.6428867577247 1133.8863837718202 1442.3252222661156 1695.726456576116 1465.8964837701228 0.8169967211153911 1.1547263369255474 1.1181308403754873 1.4668512076669313 1.1903584669814455 0.8120349817941094 0.8429264279151475 0.7735105420647373 0.9839202414597622 1.156784585644749 1.0 10.517567513901632 -7.240595236497451 24.413092709503335 0.9502586893204007 1.1656055291815173 0.28552030466245026 0.1714611410402488 620.0455985961146 726210.1097552422 0.024322970971418598 0.04209636056039101 5.7465178955653265e-08 7.240595236497451 0.21534683986111658 NLEELEEKST(ph)TPPPAEPVSLPQEPPK ddPTM_A549_MK2206_60min_R1 1 NLEELEEKSTTPPPAEPVSLPQEPPK 26 1 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.103)T(0.52)T(0.377)PPPAEPVSLPQEPPK 105.03 1.7702e-12 33440000.0 2333.1 2029.3 2150.3 2284.7 3051.3 2239.4 1973.9 1510.7 3223.2 3371.6 3528.4 True False 2726.8702411815225 2132.5827021588943 2455.2448738187745 2844.4516025640787 2602.457812032669 2476.3718216065863 2332.532079424546 1724.8463513247168 2493.1503463927365 2609.9532183221045 2652.200901114001 1.0281537269805459 0.8040803776452786 0.9257386470185952 1.0724872317814713 0.9812445998866682 0.9337044643060178 0.8794703592947332 0.6503452851555217 0.940030728948754 0.9840707079263296 1.0 11.372974346712557 -9.601141668043434 1.9468916547338502 0.9836244799571435 0.9102764334232841 0.07313467586701561 0.10746081308166326 0.6136760302222353 4.669558960372945 0.025304922997349693 0.020118444957137386 2.505291886685528e-10 9.601141668043434 -0.0733480465338594 NLEELEEKST(ph)TPPPAEPVSLPQEPPKPR ddPTM_A549_MK2206_60min_R1 1 NLEELEEKSTTPPPAEPVSLPQEPPKPR 28 2 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.106)T(0.447)T(0.447)PPPAEPVSLPQEPPKPR 75.703 1.4327e-05 11312000.0 1283.5 1627.6 1290.1 1127.0 1608.2 1298.6 1309.2 1241.6 1625.9 2147.3 2216.3 True False 1500.1234214377791 1710.437887958317 1473.0555790883127 1403.115050592953 1371.6359103696575 1436.016990059085 1547.0646934407096 1417.600602240529 1257.636246028776 1662.223438635382 1665.9315432317644 0.9004712273636817 1.0267155903898753 0.8842233554391503 0.8422405208025715 0.8233447022131543 0.8619903956397482 0.9286484187936899 0.850935687003384 0.7549147209188857 0.9977741554798891 1.0 10.702113403091118 -5.892033939181106 8.578170475304042 0.8741759830052583 0.9631743905811776 0.1436132656719068 0.07420380701400442 0.3812665608363238 27.77631001881611 0.01248933029235771 0.039066316685099925 1.282230375190364e-06 5.892033939181106 0.08899840757591926 NLEELEEKSTT(ph)PPPAEPVSLPQEPPK ddPTM_A549_MK2206_60min_R1 1 NLEELEEKSTTPPPAEPVSLPQEPPK 26 1 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.045)T(0.18)T(0.776)PPPAEPVSLPQEPPK 112.48 2.4485e-13 30227000.0 2014.9 2698.2 2613.3 2667.9 3127.8 2285.4 2445.8 2202.0 3881.8 3964.0 3958.3 True False 2354.9658604246056 2835.5268550559936 2983.9052358975987 3321.5356197665833 2667.704763371606 2527.239511074258 2890.1702010520085 2514.1402433421763 3002.578497960823 3068.5296468824345 2975.3448664775965 0.7914934120603521 0.9530077965089376 1.0028771015812148 1.1163531519285124 0.8966035478535319 0.8493938096211905 0.9713731788253429 0.8449912047737096 1.0091531008018804 1.0313189847182844 1.0 11.5388411827706 NLEELEEKSTT(ph)PPPAEPVSLPQEPPK ddPTM_A549_PD325901_60min_R1 2 NLEELEEKSTTPPPAEPVSLPQEPPK 26 1 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.004)T(0.023)T(0.973)PPPAEPVSLPQEPPK;NLEELEEKS(0.016)T(0.118)T(0.866)PPPAEPVSLPQEPPK 137.89 9.479100000000001e-25 131547000.0 5903.700000000001 6020.5 7537.6 7952.900000000001 8259.5 9317.0 8164.4 9967.900000000001 8865.5 8349.8 8344.6 True False 6503.039277925764 6527.868663946585 8049.146863270946 8444.13257065362 7679.381213728141 9241.12544104151 8475.100709731107 9769.08241483372 8492.913865606717 7822.592203014221 7318.267100777701 0.8886037074589278 0.8919965032777881 1.0998706049435631 1.1538431782240193 1.0493442105866928 1.2627477671673761 1.1580748000890089 1.3348901154202988 1.1605088675574835 1.0689131860441288 1.0 12.837286356520448 -5.772832247480363 5.400243088625589 1.117548896818988 0.8871734601248833 0.5128697208919777 0.09244741559868734 0.12025477540093973 10.525813916914716 0.015094900236605558 0.05350136399783289 1.6872046067004722e-06 5.772832247480363 -0.23037543669410465 NLEELEEKSTT(ph)PPPAEPVSLPQEPPKPR ddPTM_A549_MK2206_60min_R1 5 NLEELEEKSTTPPPAEPVSLPQEPPKPR 28 2 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.036)T(0.179)T(0.785)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.009)T(0.036)T(0.956)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.012)T(0.072)T(0.917)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.025)T(0.163)T(0.812)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.009)T(0.036)T(0.956)PPPAEPVSLPQEPPKPR 165.48 1.0533e-46 1867066000.0 47136.5 59633.299999999996 60138.7 57693.200000000004 69144.6 43533.6 44473.7 37986.0 74921.79999999999 89358.3 88604.3 True False 55091.98882321924 62668.38025558167 68667.27195885473 71828.03658994616 58973.5209352977 48140.29665673509 52553.99561310275 43370.63182724608 57952.13192552966 69172.1979679654 66601.40695572368 0.8271895646265273 0.940946792569162 1.031018338764291 1.0784762645884811 0.8854695963780921 0.7228120073910532 0.7890823635008254 0.6511969312612071 0.8701337490371034 1.0385996502138577 1.0 16.023265034122343 -5.2440336153597515 21.500608666570756 0.9080854630292344 0.8271891109397111 0.02290919087109855 0.1304325473685208 1764.2240147521616 2179013.675336854 0.018893125086435553 0.6101917135322668 5.701201420046522e-06 5.2440336153597515 -0.08089635208952328 NLEELEEKSTT(ph)PPPAEPVSLPQEPPKPR ddPTM_A549_PD325901_60min_R1 5 NLEELEEKSTTPPPAEPVSLPQEPPKPR 28 2 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 NLEELEEKS(0.046)T(0.186)T(0.768)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.013)T(0.058)T(0.929)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.022)T(0.109)T(0.868)PPPAEPVS(0.001)LPQEPPKPR;NLEELEEKS(0.03)T(0.183)T(0.788)PPPAEPVSLPQEPPKPR;NLEELEEKS(0.048)T(0.172)T(0.78)PPPAEPVSLPQEPPKPR 169.35 2.4931e-57 3431601000.0 42434.8 44257.600000000006 50145.2 59793.6 64663.7 65903.1 59692.7 67536.9 64789.6 59288.3 62189.5 True False 46742.74965715133 47987.34327406073 53548.354819583714 63486.91487088165 60121.94478965462 65366.407003703105 61964.33836359878 66189.8235478269 62066.71842390313 55544.82661979541 54540.58575172143 0.8570269096472991 0.8798464961947376 0.9818074756905888 1.1640306754292211 1.1023340501574468 1.1984911071777402 1.1361142809443157 1.2135884247583058 1.1379914162719484 1.0184127261237248 1.0 15.735042574055758 -5.962050811396696 3.071330875555909 1.099480618072218 0.8673106091879196 0.6895203699706021 0.06555972685577077 0.13784595790295515 2.6395573073752545 0.011294877628036423 0.040037497209960894 1.0913126480572613e-06 5.962050811396696 -0.2321700088842985 NLEETS(ph)PVTQAER ddPTM_A549_MK2206_60min_R1 2 NLEETSPVTQAER 13 0 O95125-2;O95125 O95125-2 ZNF202 Zinc finger protein 202 1 NLEET(0.164)S(0.835)PVT(0.001)QAER;NLEET(0.193)S(0.801)PVT(0.006)QAER 92.65 0.00017806 4322100.0 1308.2 1363.87 1069.3 1092.62 1913.6799999999998 1226.88 1184.72 1475.46 1866.77 1472.5900000000001 1406.83 True False 1528.9921775807593 1433.285157440226 1220.942818943596 1360.311949049575 1632.1802070365661 1356.707627262968 1399.968288735929 1684.6109734067416 1443.9495756191266 1139.9308962418283 1057.4752844672394 1.445889279909811 1.3553840723211996 1.154582841677205 1.286377061507311 1.5434688933263019 1.2829686397318336 1.3238780227769003 1.593049973035971 1.3654688642170911 1.0779740320986608 1.0 10.04640822943215 -10.497788713252634 0.8635153654385076 1.0042195117716055 1.3678699013579232 0.5330724285888699 0.11902814942127493 0.3420660534869912 0.46659157039905136 0.07552478082152642 0.02277409779966267 3.178420014065107e-11 10.497788713252634 0.3636503895863177 NLEETS(ph)PVTQAER ddPTM_A549_PD325901_60min_R1 2 NLEETSPVTQAER 13 0 O95125-2;O95125 O95125-2 ZNF202 Zinc finger protein 202 1 NLEET(0.331)S(0.669)PVTQAER;NLEET(0.04)S(0.921)PVT(0.04)QAER 107.46 1.7450999999999997e-10 4301400.0 688.73 989.29 648.42 917.01 699.17 941.99 955.19 1086.1 822.55 803.51 1263.9 True False 758.6493625837718 1072.6609402135573 692.4256804662156 973.6516250191854 650.0627112055574 934.3187457557892 991.540278150024 1064.4368834710326 787.9810839946764 752.7762414721251 1108.4483125222216 0.684424662849187 0.967713990896669 0.6246801701476127 0.8783915443054691 0.5864619070296301 0.8429069133857863 0.8945300082543507 0.9602945590209406 0.7108866287158332 0.6791261558775064 1.0 10.114325782872323 -7.502778199390676 24.46329252856811 0.8708296739083051 0.7562585678894378 0.10943532712635695 0.13433892408105078 930.0958224808351 1131970.0517529259 0.020434175179001115 0.03240161754278078 3.1421130077108886e-08 7.502778199390676 -0.11457110601886733 NLEQILNGGES(ph)PK ddPTM_A549_MK2206_60min_R1 2 NLEQILNGGESPK 13 0 G3V340;Q13033-2;Q13033;G3V3G7 G3V340 STRN3 Striatin-3 1 NLEQILNGGES(1)PK;NLEQILNGGES(1)PK 137.46 1.3133e-08 24500000.0 2060.67 2186.87 1684.6 1823.48 3000.6 2571.4 1765.01 2647.3999999999996 3068.4 2734.81 3023.6 True False 2408.460717455544 2298.172342123008 1923.5016111403565 2270.232681859129 2559.2157148707834 2843.5038412428244 2085.6894703405032 3022.6770573224694 2373.412299227932 2117.0145215919656 2272.7566728852416 1.0597090072110655 1.0111827498037884 0.846329760721147 0.9988894583145549 1.1260403480069359 1.2511255055003425 0.9176914956288487 1.329960700757821 1.0442879026793965 0.9314743398836608 1.0 11.15022751848213 -6.535402061531678 23.501065748028196 1.0610249035474846 0.9673388808565686 0.12320940280591464 0.12760785903718538 191.24695941931662 358890.1746789231 0.017380571171116615 0.03620535381624467 2.914727365659891e-07 6.535402061531678 -0.09368602269091597 NLEQILNGGES(ph)PK ddPTM_A549_PD325901_60min_R1 2 NLEQILNGGESPK 13 0 G3V340;Q13033-2;Q13033;G3V3G7 G3V340 STRN3 Striatin-3 1 NLEQILNGGES(1)PK;NLEQILNGGES(1)PK 97.45 0.00016332 30284000.0 4157.2 3390.9 3852.8999999999996 4230.7 3974.3 4176.799999999999 3549.7 3997.3 4242.6 4155.7 5043.4 True False 4579.23588363111 3676.663043364583 4114.380963369856 4492.0207303831685 3695.158878590684 4142.785525613624 3684.7857759703725 3917.5707156788135 4064.2982760389236 3893.3083927838015 4423.093772746715 1.0353015601537723 0.8312423910202104 0.9302043263746699 1.0155834267094115 0.8354240421848466 0.9366262029396175 0.8330788279178043 0.8857082659692347 0.9188813271564483 0.8802228921242337 1.0 12.110840113388043 -10.310796074316261 0.8772641488489573 0.9960854174692108 0.9106042783310955 0.0 0.07341944546846534 0.6438993287885629 0.9531563899557802 0.03129223487545791 0.01162762680357954 4.8888186298530425e-11 10.310796074316261 -0.08548113913811528 NLEQILNGGES(ph)PKQK ddPTM_A549_MK2206_60min_R1 2 NLEQILNGGESPKQK 15 1 G3V340;Q13033-2;Q13033 G3V340 STRN3 Striatin-3 1 NLEQILNGGES(1)PKQK;NLEQILNGGES(1)PKQK 102.98 1.7672e-06 163360000.0 6107.9 7138.8 7056.1 5803.5 9089.2 6513.0 6023.7 6415.3 9875.0 8906.1 10147.400000000001 True False 7138.764196182174 7502.134427719855 8056.76108178052 7225.357760529014 7752.19072039043 7202.201337020499 7118.128317964259 7324.688421032272 7638.328267134608 6894.20582444492 7627.520526007313 0.9359219908804385 0.9835613555073457 1.0562752409920944 0.9472747711255503 1.0163447864817976 0.9442388666754004 0.9332165405119272 0.9602974382117382 1.0014169402875344 0.9038593604485189 1.0 12.896998441829718 -8.779871300444546 24.133552413984123 1.0006691176362243 0.9737434854240262 0.0 0.04564756197783669 269.64228290361655 353049.9207918279 0.006057116185590183 0.006454701100663158 1.660078785084596e-09 8.779871300444546 -0.026925632212198125 NLEQILNGGES(ph)PKQK ddPTM_A549_PD325901_60min_R1 2 NLEQILNGGESPKQK 15 1 G3V340;Q13033-2;Q13033 G3V340 STRN3 Striatin-3 1 NLEQILNGGES(1)PKQK;NLEQILNGGES(1)PKQK 174.82 5.4496e-28 298930000.0 11702.9 13060.3 14986.5 12999.9 14908.199999999999 15916.900000000001 15700.099999999999 17515.5 16155.400000000001 15362.2 15761.1 True False 12890.969792780363 14160.93731612683 16003.574011145454 13802.874298084978 13861.099462497952 15787.278043631373 16297.575896924373 17166.139611856073 15476.444719916835 14392.228070270545 13822.584617844752 0.9326019806844453 1.0244782511835935 1.1577844848556815 0.9985740496220709 1.0027863706910123 1.142136473033432 1.1790541600942304 1.2418907235116392 1.119649121188014 1.041211066394225 1.0 13.754739783025908 -5.413477438384991 3.6770480493563156 1.081674634117216 0.9348158386222694 0.26706992336793234 0.0785765462010844 0.30780112490827205 6.802057310161729 0.012251888100458573 0.09195098605196794 3.859424607996025e-06 5.413477438384991 -0.14685879549494674 NLES(ph)PEKHLQN ddPTM_A549_MK2206_60min_R1 1 NLESPEKHLQN 11 1 P26374 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 1 NLES(1)PEKHLQN 53.168 0.0059483999999999995 13463000.0 2688.1 2462.3 2686.4 2989.8 3745.8 2629.5 3033.5 3005.0 4563.1 3983.6 3103.7 True False 3141.7855622648185 2587.6205526663593 3067.3719150940597 3722.301134217225 3194.7977820312567 2907.7519446791657 3584.647683739987 3430.9679524265384 3529.5651357733627 3083.701993269643 2332.9656322377054 1.3466917466980939 1.1091550243645882 1.3147951571630891 1.595523347100023 1.369414850302321 1.2463758164710483 1.5365197130236798 1.4706465903381802 1.5129091860594266 1.3217948651527522 1.0 11.187949339277198 -10.86039979250774 1.1016811929580028 0.9994780573504224 1.395043227789991 0.1343864707380642 0.16109125916871994 0.32877862960247295 0.7069091367965121 0.09964026923499432 0.024088292069743916 1.3791141279208463e-11 10.86039979250774 0.3955651704395685 NLES(ph)PEKHLQN ddPTM_A549_PD325901_60min_R1 2 NLESPEKHLQN 11 1 P26374 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 1 NLES(1)PEKHLQN;NLES(1)PEKHLQN 74.96600000000001 0.00037963 33956000.0 6095.3 6081.9 7132.8 6578.5 7884.5 5876.5 7010.7 6382.1 6588.5 7446.3 7033.299999999999 True False 6714.090368877297 6594.443057429909 7616.874701010798 6984.839004142495 7330.7199200483665 5828.643732347363 7277.496024902245 6254.804008839404 6311.608257125919 6976.139347206493 6168.248687762121 1.0884921650772823 1.0690948746138207 1.234852076590681 1.132386088453356 1.188460500075589 0.9449430506768415 1.1798318117978746 1.014032398085539 1.023241535259145 1.1309756951024423 1.0 12.590645216803571 -8.008532392810881 0.7474534598424851 1.0065098604922786 1.1369537685795572 0.10491538160993974 0.08168821660001199 0.4797772636958566 0.5421092838297012 0.01481254588595875 0.023510954267409883 9.805451754718938e-09 8.008532392810881 0.13044390808727857 NLESIDPQFT(ph)IR ddPTM_A549_MK2206_60min_R1 2 NLESIDPQFTIR 12 0 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 NLESIDPQFT(1)IR;NLESIDPQFT(1)IR 208.15 2.3893e-31 20863600.0 4047.8 5299.1 4989.1 4437.700000000001 7558.7 6194.2 5126.299999999999 5802.9 8528.400000000001 6615.5 6715.1 True False 4730.969680791468 5568.801555713889 5696.629400534458 5524.936699215922 6446.825242949343 6849.666132622809 6057.682354098007 6625.478845635924 6596.731017056285 5121.053955335711 5047.555342668241 0.9372794074785876 1.1032670625004195 1.1285917664694893 1.0945767454023254 1.2772173468714103 1.3570264549099396 1.2001220279629052 1.312611431840896 1.3069160354305533 1.0145612296800728 1.0 12.301369108377392 -4.954443018945589 1.0291231296600416 1.1849234452276536 0.6712906223108387 0.30831418145778067 0.113207881920981 3.7680525935864804 2.0418924320422107 0.020620748878256573 2.464100382152318 1.1105982404026597e-05 4.954443018945589 -0.5136328229168149 NLESIDPQFT(ph)IR ddPTM_A549_PD325901_60min_R1 2 NLESIDPQFTIR 12 0 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 NLESIDPQFT(1)IR;NLES(0.005)IDPQFT(0.995)IR 213.18 1.4688e-31 20677900.0 3002.1 2907.7 3002.8 3873.3 4243.2 3445.7999999999997 4043.7000000000003 3726.0 4029.2 4042.9 4400.2 True False 3306.870981970789 3152.7420835740377 3206.58806530328 4112.544944097462 3945.172270245323 3417.738547251347 4197.585216297546 3651.6820070095478 3859.8667359204333 3787.63060403437 3859.0032951659764 0.8569235963372144 0.8169835168379761 0.8309368559804156 1.065701329990852 1.0223293344131856 0.8856531818805689 1.0877381788079057 0.9462759494359251 1.000223747089187 0.9815048898193448 1.0 11.914012560445267 -6.2470253723601905 24.466205574087148 0.9994485353368009 0.8331515123082267 0.6636283849039881 0.051908167252541916 241.68711486373144 410236.34473530285 0.006426196130711858 0.016914362437526177 5.662062091624253e-07 6.2470253723601905 -0.1662970230285742 NLESIDPQFT(ph)IRR ddPTM_A549_MK2206_60min_R1 2 NLESIDPQFTIRR 13 1 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 NLESIDPQFT(1)IRR;NLESIDPQFT(1)IRR 87.51899999999999 0.00011968 88377000.0 1108.96 1473.57 1365.01 1067.12 1745.8899999999999 1283.25 940.22 1168.48 2163.29 1770.3 1664.11 True False 1296.1253365310786 1548.568418873641 1558.588943501542 1328.5644479048362 1489.0718937664979 1419.04266324759 1111.0458035951915 1334.1156183199203 1673.3082690642668 1370.3880004732534 1250.8655599004694 1.036182766622986 1.2379974863140843 1.2460083589043398 1.062116098240445 1.1904332020181148 1.1344485840352838 0.8882215956793924 1.0665539615832695 1.3377203136022155 1.095551787821462 1.0 10.28871102501515 -5.198855743007594 19.83727833093441 1.1428763088869418 1.0361707693933315 0.027017078903669778 0.12054072180166196 14686.9378933743 4653026.734649728 0.019991686824769917 33.94374966188966 6.326219507183805e-06 5.198855743007594 -0.10670553949361028 NLESIDPQFT(ph)IRR ddPTM_A549_PD325901_60min_R1 2 NLESIDPQFTIRR 13 1 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 NLESIDPQFT(1)IRR;NLESIDPQFT(1)IRR 80.719 0.00040957 158979000.0 1283.04 1041.59 1487.92 1616.38 1843.0300000000002 1713.47 1524.78 1819.43 1873.6399999999999 1803.5900000000001 1724.25 True False 1413.2932762758733 1129.3684447604228 1588.8991987898155 1716.2201215346734 1713.5819309083327 1699.5160684191687 1582.8063372916317 1783.140041334776 1794.8974265586119 1689.7110195974046 1512.1781809213076 0.934607636922001 0.7468487900495597 1.0507354350409719 1.1349324723684688 1.133187842893169 1.1238861199436987 1.046706239556567 1.1791864634949187 1.1869615956666266 1.1174020634049446 1.0 10.56241242791561 -5.88244354994723 5.715900140601976 1.101460893260611 0.8432137520454306 0.7135678891664029 0.06580904536981012 0.0957273935726229 4.377664571042397 0.011065879519009687 0.03561031103351771 1.3108604183065982e-06 5.88244354994723 -0.25824714121518033 NLETLPS(ph)FSSDEEDSVAK ddPTM_A549_MK2206_60min_R1 2 NLETLPSFSSDEEDSVAK 18 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 NLET(0.002)LPS(0.332)FS(0.332)S(0.332)DEEDS(0.001)VAK;NLETLPS(0.559)FS(0.389)S(0.051)DEEDS(0.001)VAK 88.73 6.8395e-06 3691500.0 1753.71 2253.31 2408.36 2107.01 2868.1 2788.3599999999997 2430.77 2829.94 3455.5 2914.27 4064.9 True False 2049.693373907011 2367.993854334824 2749.9016622379113 2623.227544587274 2446.2062893490966 3083.4224044364314 2872.409444603479 3231.092661327771 2672.834767299611 2255.934382951582 3055.473144467265 0.6708268333559135 0.7750007093411041 0.8999920903305366 0.8585339882097526 0.8005981966421778 1.0091472772456784 0.9400866277632745 1.0574770284525365 0.8747695171660989 0.738325711367008 1.0 11.577180085433676 -4.102895365380795 0.4525544642019016 0.9531255508933938 2.805463825892927e-11 0.39416305377127536 0.09026982458079268 5.919964313073082 0.36972231559592456 0.014147307867771726 3.8325983429387405 7.890502006743784e-05 4.102895365380795 -0.9531255508653391 NLETVS(ph)PERK ddPTM_A549_MK2206_60min_R1 2 NLETVSPERK 10 1 F5H529;Q8TC05-4;Q8TC05 F5H529 MDM1 Nuclear protein MDM1 1 NLET(0.054)VS(0.946)PERK;NLET(0.003)VS(0.997)PERK 91.28 0.00026948 28639000.0 4701.3 6117.5 5750.7 6204.700000000001 8495.4 5812.0 5952.5 6210.700000000001 8417.0 7922.299999999999 8305.9 True False 5494.764504250436 6428.854620044859 6566.2357326278325 7724.851778539569 7245.737913788333 6427.02198230664 7033.99219959198 7091.085744471047 6510.562939187038 6132.646927723694 6243.315798821783 0.8801035669679547 1.0297179939637349 1.0517225051897887 1.2372995420153785 1.1605592520493235 1.029424457997067 1.1266436660018722 1.1357884132353602 1.0428053215593691 0.9822740231850879 1.0 12.608096726569148 -9.137891090356218 2.4206096435737883 1.0154026729465775 1.086114992405295 0.11878412548421002 0.08766340969683366 0.452607122043572 5.495305590747062 0.017606125631779084 0.01685135087240734 7.279623354734145e-10 9.137891090356218 0.07071231945871759 NLFASFPTEESSINYTFKT(ph)PEKAK ddPTM_A549_PD325901_60min_R1 1 NLFASFPTEESSINYTFKTPEKAK 24 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NLFASFPTEESSINYT(0.019)FKT(0.981)PEKAK 158.83 5.3332e-34 7811900.0 2965.0 2921.4 3824.4 3806.6 3519.9 4604.2 4012.8 4297.6 3755.8 3993.8 3251.8 True False 3266.004617282363 3167.5966306541936 4083.946781985435 4041.725036584151 3272.6743669957814 4566.704921717645 4165.509299888414 4211.88099659802 3597.9567871463214 3741.6307864138266 2851.8492148585806 1.1452234572101387 1.1107167286932702 1.4320346113347906 1.4172295700369189 1.147562202778687 1.6013135960780809 1.4606344817199517 1.4768947020948586 1.2616223776490019 1.3120016187810157 1.0 11.477681989190538 -9.952932001822871 0.9140126984146688 1.0297893762073835 1.346417036397962 0.06688043071800032 0.17312174842948308 0.38042774348919167 0.6470308366941188 0.06043101425555508 0.031297940563588804 1.1144690141164667e-10 9.952932001822871 0.3166276601905784 NLFNQELLS(ph)PSKR ddPTM_A549_MK2206_60min_R1 1 NLFNQELLSPSKR 13 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 NLFNQELLS(0.952)PS(0.048)KR 79.837 0.00030582 15359000.0 1396.2 1946.2 1925.3 1693.6 2663.6 1931.1 1836.9 2269.5 2834.2 2789.5 2894.0 True False 1631.8444261873212 2045.2532671076913 2198.3364905191315 2108.5320760285927 2271.7879684495833 2135.447720239564 2170.6409527812707 2591.2085750522565 2192.258225287384 2159.3500126081112 2175.33992966328 0.7501560578809923 0.9401993864123457 1.0105714792167728 0.9692885453332213 1.0443369964717342 0.9816616203841343 0.9978398884615993 1.1911740963874775 1.0077773112116426 0.9926494628094084 1.0 11.08702514609247 -4.9539451017484675 1.3373527679524535 1.0166839970565977 0.4377841802438573 0.6570199668122119 0.057172547505901 1.21837814152653 1.0990733401753474 0.00807563131937502 1.1632949193477158 1.1118722678322506e-05 4.9539451017484675 -0.5788998168127404 NLFNQELLSPS(ph)KR ddPTM_A549_MK2206_60min_R1 1 NLFNQELLSPSKR 13 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 NLFNQELLS(0.388)PS(0.612)KR 108.34 3.1037e-05 14299000.0 1987.7 2694.5 2641.3 2661.8 3859.8 2653.9 2778.9 2775.1 3773.0 3579.5 4012.4 True False 2323.175165400759 2831.638540859971 3015.8760569304427 3313.9411194927434 3292.028533046144 2934.7339364837567 3283.7901593357706 3168.478923387316 2918.4215242429254 2770.8884639292833 3016.0103433935515 0.770280901220906 0.9388689753874885 0.9999554754633375 1.0987830750487302 1.0915176535309963 0.9730516816403407 1.0887861066288382 1.0505530693313905 0.9676430754409081 0.9187264460146174 1.0 11.558425660993132 -5.3052253685000474 2.2233407063130497 1.010393609086847 0.7221186059776383 0.6324733856713998 0.05559761644668556 0.2791035097634793 1.6846113401740483 0.007677044058026711 0.15169307384704447 4.951931534616138e-06 5.3052253685000474 -0.2882750031092087 NLFTALNAVEKS(ph)R ddPTM_A549_MK2206_60min_R1 1 NLFTALNAVEKSR 13 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 NLFTALNAVEKS(1)R 59.501999999999995 0.0025743000000000003 4608700.0 1178.7 1101.7 1052.2 746.26 1504.6 1329.0 1106.4 1092.4 1712.3 1602.3 1507.4 True False 1377.6357435517814 1157.7718242588342 1201.417781812823 929.0937335008841 1283.2753331315678 1469.6338978811975 1307.4185585264288 1247.2510453346924 1324.4667839812246 1240.3393171543205 1133.0709778764433 1.215842405683792 1.021799910918806 1.0603199669490013 0.8199784052735644 1.132563941878232 1.2970360432631742 1.1538717203548368 1.1007704457069767 1.16891775523497 1.0946704499297257 1.0 10.146022522010309 -5.241765841776554 22.50142265970906 1.0838137751583174 1.215842893703118 0.09906522410047724 0.11338913326760641 2181.3012650337178 2494683.625062792 0.016568478769294116 0.7241953197544991 5.7310494825536e-06 5.241765841776554 0.1320291185448006 NLFTALNAVEKS(ph)R ddPTM_A549_PD325901_60min_R1 2 NLFTALNAVEKSR 13 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 NLFTALNAVEKS(1)R;NLFTALNAVEKS(1)R 156.67 6.139899999999999e-19 12902300.0 3743.7 3476.0 4124.200000000001 4136.9 4588.1 4354.9 3648.2 5097.200000000001 5669.7 4571.0 4968.4 True False 4123.757668033725 3768.9347190230615 4404.093012829287 4392.426917418422 4265.847684085729 4319.435138262495 3787.0342473716414 4995.532347323956 5431.422225912852 4282.386279908261 4357.318297282545 0.9463980794346649 0.864966583087026 1.010734748383177 1.0080573916662852 0.9790075897705564 0.9913058545565339 0.8691204059463448 1.146469458161786 1.2465057302102935 0.9828031802448272 1.0 12.089224789041724 -8.27533841039226 24.841885879330075 1.121912791954026 0.9562632349393482 0.39170414768901063 0.08188794831070331 560.7557312939921 1002242.7441914963 0.016203353874233627 0.019640079441086505 5.304709302613176e-09 8.27533841039226 -0.16564955701467776 NLGS(ph)PTQVISKPESK ddPTM_A549_MK2206_60min_R1 1 NLGSPTQVISKPESK 15 1 H0YLC9;B4DFJ1;Q9BSI4-2;Q9BSI4 H0YLC9 TINF2 TERF1-interacting nuclear factor 2 1 NLGS(0.592)PT(0.408)QVISKPESK 83.42299999999999 6.3625e-05 9864500.0 3121.0 4197.2 3924.7 4125.9 6313.5 4499.6 4107.2 3953.0 6282.6 4771.1 4940.4 True False 3647.7484988759743 4410.819552309323 4481.2814752716085 5136.745685218689 5384.792513442875 4975.744685407255 4853.4250755420735 4513.34985555478 4859.601131250624 3693.30519632714 3713.5623318964977 0.9822774395207438 1.1877596652744857 1.2067338783520676 1.3832393874469797 1.4500342345655173 1.339884520765851 1.3069459030901613 1.215369354861437 1.3086090112209994 0.9945450934281175 1.0 11.858588078715808 -10.740262377351074 0.8337318855557159 0.9873573392105558 1.2739079781310088 0.4326357016807255 0.11716373368984774 0.5647990534352237 0.6467092990632485 0.10561967779850578 0.022788639987930338 1.818601825314193e-11 10.740262377351074 0.28655063892045296 NLGS(ph)PTQVISKPESK ddPTM_A549_PD325901_60min_R1 3 NLGSPTQVISKPESK 15 1 H0YLC9;B4DFJ1;Q9BSI4-2;Q9BSI4 H0YLC9 TINF2 TERF1-interacting nuclear factor 2 1 NLGS(0.496)PT(0.496)QVIS(0.007)KPESK;NLGS(0.887)PT(0.113)QVISKPESK;NLGS(0.786)PT(0.213)QVIS(0.001)KPESK 132.14 6.2186e-10 24040800.0 10155.2 10509.8 11626.8 12951.3 16502.7 14249.3 12989.7 13570.7 13813.400000000001 12562.7 14288.599999999999 True False 11186.148428136881 11395.497730146306 12415.864565628133 13751.272386463586 15343.607283224332 14133.258425140362 13484.03014173658 13300.021742491794 13232.87083539246 11769.488978036212 12531.192782898184 0.8926642995551917 0.9093705545491403 0.9907967087197442 1.0973634054397834 1.2244331045775914 1.1278462210260287 1.0760372436484076 1.0613532145673203 1.055994514221494 0.9392153789301286 1.0 13.61323612382384 -5.909858055881819 3.0881855767205013 1.0580006138737261 0.8985880237848932 0.47474018389519634 0.06896392416693212 0.18198848655317745 3.435446870924599 0.010107106820706957 0.03754847384808388 1.2306709356198708e-06 5.909858055881819 -0.1594125900888329 NLGSGS(ph)PKPR ddPTM_A549_MK2206_60min_R1 7 NLGSGSPKPR 10 1 A0A1C7CYX9 A0A1C7CYX9 1 NLGS(0.05)GS(0.95)PKPR;NLGS(0.031)GS(0.969)PKPR;NLGSGS(1)PKPR;NLGS(0.002)GS(0.998)PKPR;NLGSGS(1)PKPR;NLGS(0.2)GS(0.8)PKPR;NLGS(0.036)GS(0.964)PKPR 113.07 3.2732e-05 1388651200.0 25327.499999999996 29448.3 29410.2 27709.8 39758.7 29864.899999999998 28726.399999999998 29313.699999999997 43077.299999999996 39022.1 36969.8 True False 29602.16280207663 30947.092686140913 33581.008597863045 34498.702243940206 33910.24789803141 33025.183895283815 33945.615039455544 33469.0067444412 33320.36033031267 30206.980507974546 27789.17834542692 1.0652406643375283 1.113638276794667 1.208420349117276 1.2414437668905538 1.220268101363702 1.188418868840667 1.2215407961150369 1.2043899365577668 1.1990408610190515 1.0870051691523117 1.0 14.762235557934549 -10.630889859921815 0.8217945034761738 0.9951921905512936 1.1881749739142928 0.47175855084998153 0.054892577190875334 0.3371542836383317 0.39065515910980964 0.040678988495008145 0.009982634122726645 2.3394304591453547e-11 10.630889859921815 0.19298278336299923 NLGSGS(ph)PKPR ddPTM_A549_PD325901_60min_R1 9 NLGSGSPKPR 10 1 A0A1C7CYX9 A0A1C7CYX9 1 NLGS(0.009)GS(0.991)PKPR;NLGS(0.07)GS(0.93)PKPR;NLGS(0.018)GS(0.982)PKPR;NLGS(0.027)GS(0.973)PKPR;NLGS(0.384)GS(0.616)PKPR;NLGS(0.244)GS(0.756)PKPR;NLGS(0.207)GS(0.793)PKPR;NLGS(0.151)GS(0.849)PKPR;NLGS(0.036)GS(0.964)PKPR 114.87 2.5804000000000002e-05 2418461800.0 31548.499999999996 32577.1 34477.6 35277.92 41415.7 39673.899999999994 36336.9 37944.2 38703.600000000006 38456.299999999996 40195.7 True False 34751.28049522181 35322.48654634238 36817.457266651225 37456.9569964306 38506.804108408534 39350.80891223964 37719.72061381462 37187.37316435095 37077.022287394524 36028.16265500676 35251.8837215361 0.9857992489062801 1.0020028099878007 1.0444110606253556 1.0625519275030224 1.0923332328162634 1.1162753520657798 1.0700058161933308 1.0549045678836284 1.0517742138342359 1.0220209206294533 1.0 15.105412731049743 -2.1225287508157398 13.287651583467309 1.0391069509417017 0.005233246744440034 0.0 0.039045752021089716 0.0 0.0 0.005895470138587459 0.0 0.007541734670065912 2.1225287508157398 -1.0338737041972617 NLGSPT(ph)QVISKPESK ddPTM_A549_MK2206_60min_R1 1 NLGSPTQVISKPESK 15 1 H0YLC9;B4DFJ1;Q9BSI4-2;Q9BSI4 H0YLC9 TINF2 TERF1-interacting nuclear factor 2 1 NLGS(0.393)PT(0.604)QVIS(0.003)KPESK 109.65 1.2345e-06 9189100.0 3093.4 4414.1 4270.4 4853.5 5901.0 5584.1 5045.2 4575.8 6681.6 5952.7 5990.5 True False 3615.490293631186 4638.758835854516 4876.00693352355 6042.607717881897 5032.970717007432 6175.005755574415 5961.84753387341 5224.433662799788 5168.228268322693 4607.980935670302 4502.893520610874 0.8029260023765118 1.030172890969274 1.0828608118768173 1.3419388422629506 1.1177192385230212 1.3713417222303534 1.324003667105282 1.1602392192678428 1.1477571576290702 1.023337752620269 1.0 12.136636647506641 -5.317457910494317 2.0063687158591956 1.136213730792712 0.7313734114691687 0.42229522559845123 0.1233165417650971 0.597314853249639 2.798862970814081 0.0199697352352285 0.4224329387166466 4.814399103285099e-06 5.317457910494317 -0.40484031932354336 NLGSPT(ph)QVISKPESK ddPTM_A549_PD325901_60min_R1 1 NLGSPTQVISKPESK 15 1 H0YLC9;B4DFJ1;Q9BSI4-2;Q9BSI4 H0YLC9 TINF2 TERF1-interacting nuclear factor 2 1 NLGS(0.384)PT(0.616)QVISKPESK 116.43 3.7055e-07 10861000.0 4579.7 5044.9 5387.8 5311.2 6899.4 5761.2 5960.2 6342.3 5396.5 5633.6 5674.4 True False 5044.627772603051 5470.051428078092 5753.448507473363 5639.260761389622 6414.809945637861 5714.282697319774 6187.018672546581 6215.797851061904 5169.703871834263 5277.893534563808 4976.484772985279 1.0136929987182288 1.0991797780176333 1.156127019358285 1.1331815565883383 1.2890243290727008 1.1482568435333336 1.2432507994664537 1.2490338330389765 1.0388264221962193 1.0605665997843938 1.0 12.28091131384372 -8.88340308685818 6.6581604331548165 1.017018824877763 1.1685854502796336 0.392087811965522 0.07352559814628615 0.1406797983953047 7.6987571820392935 0.01304394360959184 0.013835393305057071 1.3079673802659968e-09 8.88340308685818 0.1515666254018706 NLGTIAK ddPTM_A549_MK2206_60min_R1 2 NLGTIAK 7 0 P14625;Q96GW1;A0A1W2PRR1 P14625 HSP90B1 Endoplasmin 0 ; 82.45200000000001 0.011234000000000001 3061100.0 2250.0 2412.5 3119.8 2983.3 3352.2 2588.8 3010.4 2395.6 3428.3 4275.0 3862.3 False True 2629.74499278146 2535.2859453793576 3562.2345520810195 3714.208633925426 2859.095820632487 2862.7450976936393 3557.3507127512303 2735.1836362173103 2651.7955238701356 3309.2745308835547 2903.1843159428067 0.9058139982157669 0.8732776391277884 1.2270094366792508 1.2793568129756308 0.9848137456970237 0.9860707368708573 1.2253272013134253 0.9421322722078228 0.9134092896919523 1.1398775174937077 1.0 11.50342045264989 NLIDAGVDALR ddPTM_A549_PD325901_60min_R1 2 NLIDAGVDALR 11 0 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 ; 125.74 4.2257e-13 1431200.0 594.09 653.36 625.51 711.88 809.84 638.24 755.9 428.19 863.54 652.97 720.24 False True 654.4015794540572 708.4209401671195 667.9608700971938 755.851210803217 752.9596321963307 633.0423850477972 784.6661881443512 419.6494145414434 827.2484168412409 611.7413627634426 631.6550459775337 1.036011005724369 1.1215313558855289 1.0574772961141696 1.1966202369736163 1.1920424557537872 1.0021963555568791 1.242238454582471 0.6643648573914331 1.3096521940405172 0.9684738001526241 1.0 9.302993091020994 NLILAGVK ddPTM_A549_PD325901_60min_R1 1 NLILAGVK 8 0 A0A590UK93;A0A590UKC5;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0QZS6;M0QX65;A0A590UKA0 A0A590UK93 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed 0 102.72 0.0012370999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NLKAS(ph)LENSLR ddPTM_A549_MK2206_60min_R1 1 NLKASLENSLR 11 1 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 1 NLKAS(0.969)LENS(0.031)LR 73.02199999999999 0.00046719999999999997 8841000.0 1245.9 1216.2 1254.5 1317.2 1697.1 1280.3 1492.9 1256.3 2251.9 1600.8 1482.2 True False 1456.1774606695208 1278.0993851897924 1432.4069637751254 1639.914059131356 1447.458838134775 1415.780496205641 1764.1406055893956 1434.3843722573913 1741.8482455453614 1239.178168196116 1114.1288333610614 1.3070099409209077 1.147173780014355 1.285674439870562 1.471924978536033 1.2991844343244725 1.2707511499676103 1.58342603904021 1.287449287108202 1.5634172578503511 1.1122395643040766 1.0 10.12170035441743 -11.01147061440019 1.3027494817888552 1.0005452437308076 1.375540127478451 0.43272531332925046 0.1302724999214427 0.29548212168569316 0.8950689136931331 0.09708799705547873 0.022155796096676457 9.739336822220976e-12 11.01147061440019 0.37499488374764334 NLKAS(ph)LENSLR ddPTM_A549_PD325901_60min_R1 2 NLKASLENSLR 11 1 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 1 NLKAS(1)LENSLR;NLKAS(1)LENSLR 97.417 7.7828e-05 31419000.0 2889.1 2878.6 2603.3 2919.3 3373.5 3566.1000000000004 2757.6 3102.1000000000004 3787.2 3135.9 3361.6000000000004 True False 3182.3993051569896 3121.1897244475804 2779.9755929146236 3099.618530788658 3136.5569979432 3537.058863936685 2862.5419770166213 3040.226181949627 3628.037154342763 2937.8987388239566 2948.14451093813 1.0794583825011743 1.058696313178483 0.9429577086877625 1.0513794419807214 1.0639088370010448 1.199757627488605 0.9709639288020283 1.0312337711634751 1.2306171359246851 0.9965246710002986 1.0 11.525591528261959 -6.8378225276008315 3.423706225271152 1.0999758306224185 1.027462556155345 0.0 0.08567226477355286 0.46021756983672163 10.77194734579649 0.01468318814581899 0.02967577846979634 1.4527051374377136e-07 6.8378225276008315 -0.07251327446707356 NLKPS(ph)SETK ddPTM_A549_PD325901_60min_R1 1 NLKPSSETK 9 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 NLKPS(0.5)S(0.5)ETK 86.911 0.00032401 12069000.0 3579.1 3945.2 3924.3 4001.6 5121.9 5233.7 5000.2 4898.5 5044.1 4618.6 5212.5 True False 3942.4475972058403 4277.675849680603 4190.626596732936 4248.7697437070165 4762.155413595753 5191.0784824277025 5190.485347214426 4800.79557470109 4832.114018330251 4326.980807784795 4571.395544759934 0.8624166424900511 0.9357483525099871 0.9167061908559931 0.9294250961453698 1.041729022782656 1.1355566219549946 1.1354268726897059 1.0501816190909385 1.057032578130145 0.9465338900162982 1.0 12.158418939695663 -6.732396420862771 4.4861587373613565 1.0471181809678873 0.9108301423181193 0.6209968610681514 0.053170525194902195 0.10915647308500284 5.0406316497751 0.007645025671203719 0.015881200032857694 1.8518405050892423e-07 6.732396420862771 -0.13628803864976802 NLKPSS(ph)ETK ddPTM_A549_MK2206_60min_R1 1 NLKPSSETK 9 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 NLKPS(0.12)S(0.862)ET(0.018)K 46.592 0.01009 7143400.0 1804.8 2462.0 2379.2 2069.9 3324.3 2455.8 2402.9 2219.8 3101.2 2869.8 3438.0 True False 2109.4061168764365 2587.3052839477637 2716.6063357622775 2577.025592921343 2835.2998736735804 2715.6711259718923 2839.4758263586027 2534.46344785239 2398.7831515987714 2221.510186837338 2584.2497160270764 0.8162547542500476 1.0011823810608307 1.0512166525217543 0.9972045568735365 1.0971462456161003 1.0508547642009063 1.0987621702146884 0.9807347301362092 0.9282319493824173 0.8596344900649153 1.0 11.335529769038807 -2.5556274494302893 16.653847994283435 0.9891963700132891 0.11199607334157236 0.0 0.08639968976269834 0.0 0.0 0.010442582612102343 0.0 0.0027820988105392123 2.5556274494302893 -0.8772002966717167 NLKPSS(ph)ETK ddPTM_A549_PD325901_60min_R1 1 NLKPSSETK 9 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 NLKPS(0.184)S(0.808)ET(0.008)K 52.247 0.006789699999999999 12135000.0 4015.8 3802.3 4180.6 4593.8 5069.3 4702.7 4584.4 4703.5 4835.9 3915.6 4939.9 True False 4423.481059724292 4122.733165173012 4464.32065599004 4877.5485927232385 4713.24985613561 4664.402770375215 4758.861850679938 4609.68500267563 4632.663940295248 3668.3683477595214 4332.323616606161 1.021041235878298 0.95162170004342 1.0304679546278408 1.1258504729487855 1.0879265431763516 1.0766515115574855 1.0984548412862833 1.064021391432145 1.0693254590995598 0.846743842887996 1.0 12.080925298299666 -5.981612431104067 14.98318155188963 1.0532747396240394 0.9875002401667625 0.08491284526424348 0.0721956268336743 2.6218909031409363 2130.7418290998894 0.006296074164362547 0.01950951949876708 1.0432480194404235e-06 5.981612431104067 -0.06577449945727687 NLKT(ph)LQK ddPTM_A549_MK2206_60min_R1 2 NLKTLQK 7 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 NLKT(1)LQK;NLKT(1)LQK 70.1 0.0085216 400460000.0 30005.0 35166.0 40370.0 37417.0 50115.0 40751.0 38353.0 40633.0 58189.0 46787.0 46286.0 True False 35069.11044818119 36955.79919386964 46095.073039140574 46584.16667971297 42743.149886939085 45063.24377167548 45321.243650726814 46392.85218334363 45009.28440873882 36217.784205017284 34791.9087713872 1.0079674179021176 1.0621952200639828 1.3248791074391721 1.3389367909019037 1.228537076473682 1.2952219456477596 1.302637459431341 1.3334379693906597 1.2936710286431417 1.0409829608084833 1.0 15.08646421054731 -10.738774892811712 0.9954606992645127 1.0002484467557875 1.249649376616001 0.3932311271171697 0.10581204561018444 0.4372541471401762 0.7709838179745516 0.07637360104595761 0.019718907661333867 1.824841324413317e-11 10.738774892811712 0.24940092986021356 NLKT(ph)LQK ddPTM_A549_PD325901_60min_R1 2 NLKTLQK 7 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 NLKT(1)LQK;NLKT(1)LQK 65.5 0.0098909 674470000.0 26879.0 27277.0 35097.0 32930.0 35520.0 34060.0 38366.0 37720.0 36315.0 31032.0 33368.0 True False 29607.73629272602 29575.72851863981 37478.893475406025 34964.0113105438 33025.19773734772 33782.626652557 39826.03912468078 36967.64500923246 34788.80683881428 29072.63422404576 29263.94753717974 1.0117478598917489 1.0106540985649306 1.2807189948584081 1.1947810959585048 1.1285284630649821 1.154411126852804 1.3609250451970616 1.263248745312477 1.1887940543433255 0.993462491248287 1.0 14.8368367733655 -10.548824125198651 0.9671971820535944 1.0053993942867072 1.180000906245963 0.31816709312318414 0.10069192476175999 0.5428190063358661 0.9464332974118079 0.0607135194857719 0.019202984915740302 2.8260241888938736e-11 10.548824125198651 0.17460151195925588 NLKTEEEEEEEEEEEEDDEEEEGDDEGQKS(ph)R ddPTM_A549_PD325901_60min_R1 2 NLKTEEEEEEEEEEEEDDEEEEGDDEGQKSR 31 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 NLKTEEEEEEEEEEEEDDEEEEGDDEGQKS(1)R;NLKTEEEEEEEEEEEEDDEEEEGDDEGQKS(1)R 169.03 3.3849999999999995e-58 34200000.0 3223.4 2898.7 3726.1 3315.6000000000004 3412.3999999999996 3621.1 4142.9 4066.5 4066.3 3967.9 4197.2 True False 3550.6371950583402 3142.9836219885333 3978.9755528595133 3520.3970817260556 3172.724796140915 3591.610962171878 4300.560326581865 3985.390467392464 3895.407551939159 3717.366116833947 3680.971008242954 0.9645925455830128 0.853846339715884 1.0809581341307022 0.9563772911665649 0.8619260485986164 0.9757237843300127 1.1683222489260139 1.0827008575910568 1.0582554285855574 1.0098873662708812 1.0 11.845870671594376 -7.536309361686322 24.928871562702614 1.0440959579738398 0.944096618576461 0.3909128196514404 0.07034768800892849 210.88107891198862 391420.0657950508 0.010978985587733855 0.016289231946705434 2.908644460560957e-08 7.536309361686322 -0.09999933939737882 NLLEDDS(ph)DEEEDFFLR ddPTM_A549_PD325901_60min_R1 1 NLLEDDSDEEEDFFLR 16 0 O75379 O75379 VAMP4 Vesicle-associated membrane protein 4 1 NLLEDDS(1)DEEEDFFLR 306.75 2.496999999999999e-143 41995000.0 4871.7 3685.6 3956.3 4954.4 4814.0 4710.0 4120.1 5430.4 4422.1 4407.0 5028.6 True False 5366.271397644012 3996.1984466143235 4224.798309164567 5260.422035741215 4475.881247398419 4671.643321595524 4276.89266010523 5322.086411933613 4236.254515266987 4128.741267896677 4410.114078921787 1.2168101100359727 0.9061440078646082 0.9579793705013347 1.1928086080320437 1.0149128043628093 1.05930214910397 0.9697918429245875 1.206791098073996 0.9605770824646545 0.9361982919285611 1.0 12.10660025993832 NLLEENFEEHS(ph)MSPEREMGNENIPSTVSTISR ddPTM_A549_MK2206_60min_R1 1 NLLEENFEEHSMSPEREMGNENIPSTVSTISR 32 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NLLEENFEEHS(0.869)MS(0.131)PEREMGNENIPSTVSTISR 71.748 6.0419e-05 3010100.0 814.92 808.7 695.4 908.7 1349.5 822.05 533.67 896.27 1308.1 1228.6 1455.4 True False 952.458573118874 849.8593757630208 794.018176651433 1131.3315407930936 1150.99033767184 909.0387853673732 630.6309310636294 1023.3190172117584 1011.8174386064596 951.0584067002417 1093.9840130034338 0.870632990791141 0.7768480760791092 0.7258041865452203 1.0341390069194207 1.0521089193176605 0.830943390910887 0.5764535162925183 0.9354058240781132 0.9248923444764121 0.8693531124730033 1.0 10.095375940041926 -8.500907622703814 24.627124565441363 0.9627228695782095 0.8404461926621697 0.0976166918837087 0.1285364645727841 904.950688722925 1014348.1326941878 0.021750894222217036 0.02617224734480155 3.1556757850118532e-09 8.500907622703814 -0.12227667691603983 NLLEENFEEHSMS(ph)PER ddPTM_A549_MK2206_60min_R1 3 NLLEENFEEHSMSPER 16 0 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NLLEENFEEHS(0.049)MS(0.951)PER;NLLEENFEEHS(0.213)MS(0.787)PER;NLLEENFEEHS(0.266)MS(0.734)PER 90.96799999999999 3.0808999999999996e-06 10123200.0 1412.7599999999998 1675.3400000000001 1384.23 1670.24 2640.77 2016.19 1470.2199999999998 1854.1999999999998 3180.09 2192.96 3297.7200000000003 True False 1651.1993493341927 1760.6076500442907 1580.5346285105165 2079.448874979922 2252.3162312068666 2229.541887561395 1737.3399431640687 2117.038528249348 2459.8046925602143 1697.5688129231353 2478.805111558118 0.6661271358668 0.7102646520434254 0.6376195615947516 0.8388916358466075 0.9086298155126501 0.8994421857392242 0.7008779895858849 0.8540560604696462 0.9923348475806715 0.68483351313411 1.0 11.275429133076964 -6.141452205594185 0.23723520426786063 1.03768086694189 0.4545409041005572 0.022597277100509627 0.1256771896269934 3.028231841207389 0.19383417350118956 0.06529042094002038 0.5090196974575649 7.220176170994104e-07 6.141452205594185 -0.5831399628413327 NLLEENFEEHSMS(ph)PER ddPTM_A549_PD325901_60min_R1 2 NLLEENFEEHSMSPER 16 0 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NLLEENFEEHS(0.087)MS(0.913)PER;NLLEENFEEHS(0.199)MS(0.801)PER 93.583 1.8455000000000002e-06 18981900.0 2263.8 2680.1000000000004 1902.1999999999998 2813.3999999999996 3167.2 2327.0 2618.6 2461.1000000000004 2340.5 2683.3 3353.8999999999996 True False 2493.619309478522 2905.961432811768 2031.2947308578312 2987.1773283050084 2944.7467982468365 2308.0496835143917 2718.2522559529034 2412.0114298044004 2242.1369243079935 2513.8759800651565 2941.3915621238057 0.84776856695612 0.987954636924825 0.6905897048916374 1.0155660221409433 1.001140696861389 0.7846795079019963 0.9241381837616388 0.820023916864312 0.7622708085451494 0.8546553313187703 1.0 11.522283135235957 -7.264793352491306 24.494968444583627 0.8760742026633563 0.9068427298094749 0.040190823840615564 0.10449858167612157 1132.541481679835 8271239.572706744 0.01785831267152463 0.029251264075271344 5.43508884259744e-08 7.264793352491306 0.03076852714611855 NLLEENFEEHSMS(ph)PEREMGNENIPSTVSTISR ddPTM_A549_PD325901_60min_R1 4 NLLEENFEEHSMSPEREMGNENIPSTVSTISR 32 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NLLEENFEEHS(0.195)MS(0.8)PEREMGNENIPS(0.001)T(0.001)VST(0.002)IS(0.002)R;NLLEENFEEHS(0.171)MS(0.829)PEREMGNENIPSTVSTISR;NLLEENFEEHS(0.095)MS(0.902)PEREMGNENIPS(0.001)T(0.001)VSTISR;NLLEENFEEHS(0.034)MS(0.966)PEREMGNENIPSTVSTISR 113.51 2.4533e-16 45624900.0 5294.74 4716.73 6305.429999999999 5826.07 6623.030000000001 5751.59 5485.17 6436.97 5822.62 5773.469999999999 7016.7300000000005 True False 5832.258107018425 5114.225390465376 6733.354397430819 6185.93311193501 6157.851221013123 5704.750957973587 5693.911145950193 6308.579583644721 5577.915530106476 5408.932118893445 6153.716692716235 0.9477618808681426 0.8310791097222205 1.0941931085973886 1.0052352782598697 1.0006718749827697 0.9270415332454189 0.9252800267340411 1.025165749198657 0.9064303426104586 0.8789699605923774 1.0 12.587242310487959 -7.253332910258873 24.673747744742656 0.9562219555697186 0.9759628428544899 0.033278115172504896 0.07016742184992114 2412.249576007707 7342169.952308915 0.010246355363842535 0.0175028703859162 5.580422611019405e-08 7.253332910258873 0.019740887284771302 NLLFSGSPAVTMT(ph)PTR ddPTM_A549_PD325901_60min_R1 1 NLLFSGSPAVTMTPTR 16 0 Q14CB8-6;Q14CB8-7;Q14CB8;Q14CB8-2;Q14CB8-4;Q14CB8-3 Q14CB8-6 ARHGAP19 Rho GTPase-activating protein 19 1 NLLFSGS(0.001)PAVT(0.059)MT(0.881)PT(0.059)R 77.305 0.00019954 2380600.0 2150.0 2131.0 2540.8 2459.7 2680.5 2603.3 2841.1 3337.8 2561.5 2453.9 2838.4 True False 2368.2664172536547 2310.5868487451503 2713.233967071591 2611.63008261599 2492.230927222988 2582.0995879213656 2949.219615209575 3271.224960546555 2453.8490628561976 2298.960335214805 2489.2947941000675 0.9513804563713125 0.928209408633129 1.0899608891250192 1.0491445564446091 1.0011795039823645 1.0372815602399752 1.1847610906508885 1.314117142051539 0.985760733791803 0.9235388033043019 1.0 11.281521375889977 -4.040571004386255 13.196097561607125 1.0296536937432272 0.9469392341927827 0.0 0.1129551477765214 0.0 0.0 0.015019128164888016 0.0 9.108125280353878e-05 4.040571004386255 -0.08271445955044454 NLLLSTS(ph)EEQIEK ddPTM_A549_MK2206_60min_R1 1 NLLLSTSEEQIEK 13 0 P17181-4;P17181-3;P17181 P17181-4 IFNAR1 Interferon alpha/beta receptor 1 1 NLLLS(0.145)T(0.111)S(0.744)EEQIEK 99.01100000000001 0.00015852 2295800.0 1120.2 1151.8 1367.3 905.12 1651.0 1787.3 1252.5 1437.2 2038.3 1670.6 1800.8 True False 1309.2623737394638 1210.4217002644334 1561.2036999360128 1126.8744406323808 1408.1400870664752 1976.430899686279 1480.0630373773984 1640.9275012404055 1576.628304496251 1293.2102997179102 1353.6116604483882 0.967236329292381 0.894216366209107 1.153361592215347 0.8324946316280255 1.0402836560967748 1.4601166327361423 1.0934177656885156 1.212258692198945 1.1647567397387726 0.9553776297180612 1.0 10.40259818612754 -5.75788939038615 24.974999966163185 1.0996665284511384 0.9307263070834336 0.1557377732291675 0.15317430865871054 122.59759972611404 862460.871819316 0.020799434035491896 0.07461651704005459 1.746266849583834e-06 5.75788939038615 -0.1689402213677048 NLLPAYRPNLS(ph)PPAEAGLALPPTGYR ddPTM_A549_MK2206_60min_R1 1 NLLPAYRPNLSPPAEAGLALPPTGYR 26 1 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 NLLPAYRPNLS(0.994)PPAEAGLALPPT(0.006)GYR 56.708999999999996 0.00093321 3359800.0 572.35 772.45 972.71 875.78 1712.9 1042.5 1023.4 701.4 1366.5 1275.6 1113.9 True False 668.9486873859864 811.7644055992891 1110.654904530652 1090.3461393152584 1460.9346790649086 1152.8166580445065 1209.3385328958311 800.8255979474122 1056.9899318520963 987.4410740573242 837.2878879239554 0.7989470491979003 0.9695164797045478 1.3264910678267503 1.3022356528036703 1.7448415295810351 1.3768462134366959 1.4443521163244946 0.9564519079967215 1.2623972555877876 1.179332805715931 1.0 9.70957994524928 -10.599738572886634 0.6324123475082761 0.9771852569587561 1.2621479199311816 0.033993595762075945 0.25311185645623274 1.7756543807320384 1.104890816723381 0.27746683109213577 0.055294693745159024 2.5133989372664686e-11 10.599738572886634 0.28496266297242545 NLLPAYRPNLS(ph)PPAEAGLALPPTGYR ddPTM_A549_PD325901_60min_R1 2 NLLPAYRPNLSPPAEAGLALPPTGYR 26 1 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 NLLPAYRPNLS(1)PPAEAGLALPPTGYR;NLLPAYRPNLS(0.999)PPAEAGLALPPTGYR 96.70700000000001 1.6166e-09 14852800.0 6458.5 6195.4 7147.5 7738.2 8304.6 7538.8 8289.3 8166.3 8183.8 7550.3 8718.0 True False 7114.162165503595 6717.508100758189 7632.572331409083 8216.171039272698 7721.313545314695 7477.406512281175 8604.753847579006 8003.416740161581 7839.8633459311095 7073.572769457738 7645.741267955322 0.9304738306173569 0.8785947451442642 0.998277611537624 1.074607516959559 1.0098842315886505 0.9779832000881762 1.1254309485521148 1.046781006533054 1.0253895693265724 0.9251650718425897 1.0 12.900440664830272 -5.865876513076855 5.160144261742514 1.0239403391699027 0.905400832709964 0.4482539861370862 0.050022227131940794 0.10562312235086094 4.362227910757256 0.005612903091378762 0.01840631205070214 1.3618318495283426e-06 5.865876513076855 -0.11853950645993871 NLLRS(ph)PSIK ddPTM_A549_PD325901_60min_R1 1 NLLRSPSIK 9 1 O60336-3;O60336-6;O60336;O60336-2;D6RAI2;D6R9F7;D6RHX7;O60336-5 O60336-3 MAPKBP1 Mitogen-activated protein kinase-binding protein 1 1 NLLRS(0.822)PS(0.178)IK 55.452 0.004919 4612000.0 3467.9 3046.3 2987.5 3113.6 3498.7 3676.3 3423.3 3136.1 3183.1 3317.1 3472.0 True False 3819.9586550669505 3303.0223919907794 3190.249715296905 3305.9200005013413 3252.9633818597536 3646.3614316733815 3553.5755548016377 3073.548025277142 3049.3253765284235 3107.6577399001717 3044.966010821388 1.254516024642425 1.0847485260105678 1.0477127508022088 1.085700132202645 1.0683086019020152 1.1975048058713027 1.1670329133963144 1.0093866448276196 1.0014316631750708 1.0205886465911231 1.0 11.572210408920753 -8.305873535021608 9.197184697601493 1.001277442279211 1.1230750181937725 0.5027239367427345 0.05778644967186584 0.28608751169353935 57.50404253504743 0.009430734658016802 0.011420592947227257 4.944546494261843e-09 8.305873535021608 0.12179757591456153 NLLS(ph)VAYK ddPTM_A549_MK2206_60min_R1 2 NLLSVAYK 8 0 P31947-2;P31947;K7EIT4;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q04917;A2IDB2;A0A0J9YWZ2;P27348;E9PG15;P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;P61981;P62258;B4DJF2;I3L3T1;P62258-2 P31947-2;P63104;P27348;P31946-2;P61981;P62258 SFN;YWHAE;YWHAZ;YWHAH;YWHAQ;YWHAB;YWHAG 14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon 1 NLLS(1)VAYK;NLLS(1)VAYK 93.258 0.0025646 14643200.0 6527.700000000001 9411.7 9809.9 8423.2 11299.7 9392.3 8758.7 9025.5 14092.5 12480.5 12835.3 True False 7629.416173057573 9890.715329379025 11201.091330360781 10486.884378131816 9637.52909862208 10386.18695189584 10350.042415550835 10304.892264434515 10900.571251098181 9661.146381916305 9647.940773741217 0.7907818209065444 1.0251633546817127 1.1609825964983918 1.0869557166720956 0.9989208396523874 1.0765185230162178 1.0727721757704534 1.0680924050115774 1.1298339725266813 1.0013687488848428 1.0 13.236005335588715 -5.282274241192175 3.955103318248581 1.0678392560289964 0.770505298963129 0.716229715801564 0.04954245166013739 0.0954014895826994 3.0117191082261665 0.007569009248650062 0.07828006270707391 5.220664189085565e-06 5.282274241192175 -0.2973339570658674 NLLS(ph)VAYK ddPTM_A549_PD325901_60min_R1 2 NLLSVAYK 8 0 P31947-2;P31947;K7EIT4;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q04917;A2IDB2;A0A0J9YWZ2;P27348;E9PG15;P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;P61981;P62258;B4DJF2;I3L3T1;P62258-2 P31947-2;P63104;P27348;P31946-2;P61981;P62258 SFN;YWHAE;YWHAZ;YWHAH;YWHAQ;YWHAB;YWHAG 14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon 1 NLLS(1)VAYK;NLLS(0.994)VAY(0.006)K 104.79 0.0020340999999999996 27959000.0 15569.3 14533.7 16769.6 17919.2 21400.2 22403.6 18765.2 19223.6 22685.4 17304.1 18209.1 True False 17149.883874487132 15758.505905024585 17907.6858997968 19026.028286544093 19897.123778682097 22221.1525094899 19479.31995471145 18840.17021737754 21732.011528603547 16211.516172863812 15969.496136995329 1.0739151521980264 0.9867879217878416 1.121368247700152 1.1913981582967998 1.2459456208256896 1.391474866762504 1.2197830030206886 1.179759840620891 1.3608451601837726 1.0151551453967176 1.0 13.96303117369335 -6.024946400526299 3.1422769606429344 1.200141993549559 1.0309522041494423 0.24866409848749405 0.11442138420715288 0.32536324007143397 6.500132833734011 0.020018838513918908 0.06605855551851607 9.441773969668864e-07 6.024946400526299 -0.16918978940011664 NLLSVAYK ddPTM_A549_MK2206_60min_R1 2 NLLSVAYK 8 0 P31947-2;P31947;K7EIT4;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q04917;A2IDB2;A0A0J9YWZ2;P27348;E9PG15;P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;P61981;P62258;B4DJF2;I3L3T1;P62258-2 P31947-2;P63104;P27348;P31946-2;P61981;P62258 SFN;YWHAE;YWHAZ;YWHAH;YWHAQ;YWHAB;YWHAG 14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon 0 ; 138.1 0.0030179 28755000.0 5530.5 6852.6 6926.1 6586.1 9717.4 7428.5 7558.200000000001 7143.4 11203.9 9201.3 8493.6 False True 6463.9131922568295 7201.368070178897 7908.325126985172 8199.694795661266 8287.98333256194 8214.578939360785 8931.42710507453 8155.998825745005 8666.234538951847 7122.719939419616 6384.404708565316 1.0124535469352132 1.1279623393105929 1.2386942068969038 1.2843319259915584 1.2981607073628625 1.2866632543422738 1.398944382879132 1.2774877530559614 1.3574068271902044 1.115643550895791 1.0 12.640336391819769 -3.9905486213330637 16.017377121598898 1.207642085433586 1.2104737204594997 0.0 0.12835121900278246 0.0 0.0 0.021052577956735232 0.0 0.00010220011363064434 3.9905486213330637 0.002831635025913659 NLLSVAYK ddPTM_A549_PD325901_60min_R1 2 NLLSVAYK 8 0 P31947-2;P31947;K7EIT4;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q04917;A2IDB2;A0A0J9YWZ2;P27348;E9PG15;P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;P61981;P62258;B4DJF2;I3L3T1;P62258-2 P31947-2;P63104;P27348;P31946-2;P61981;P62258 SFN;YWHAE;YWHAZ;YWHAH;YWHAQ;YWHAB;YWHAG 14-3-3 protein sigma;14-3-3 protein zeta/delta;14-3-3 protein eta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon 0 ; 138.1 0.0030179 65608000.0 14601.6 15111.1 15676.900000000001 17221.1 20163.2 17283.199999999997 18876.7 16978.4 20817.0 18130.5 17838.0 False True 16083.943682870204 16384.565429410053 16740.828706857923 18284.808235044213 18747.006391263778 17142.451349426687 19595.063148226596 16639.752492702864 19942.13388306752 16985.737135829517 15644.039084398595 1.0281196304930174 1.0473360070897526 1.0701091077912948 1.1688035382933293 1.1983482200552473 1.095781674856746 1.252557798054101 1.0636481028289726 1.274743292028419 1.0857641715283723 1.0 13.933325425105075 -6.083609814769303 3.9991925361286693 1.1408389776291261 1.040955721576925 0.23174772410731614 0.07726254116130765 0.34662318160021355 10.191516575628485 0.014320193246892763 0.041718304410835114 8.248788820051425e-07 6.083609814769303 -0.09988325605220116 NLMPS(ph)AGK ddPTM_A549_PD325901_60min_R1 2 NLMPSAGK 8 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NLMPS(1)AGK;NLMPS(1)AGK 61.56 0.0038243 20127600.0 4582.4 4503.4 4928.1 4831.700000000001 5290.0 5161.7 4592.4 5366.200000000001 4949.0 5523.1 5290.9 True False 5047.601874615418 4882.917322683674 5262.550501072697 5130.143135413138 4918.448649509272 5119.66482655618 4767.166295057704 5259.166931297538 4741.010740611094 5174.370523421857 4640.152841778482 1.0878093991147 1.0523182078657876 1.1341330082255787 1.1055978779886164 1.0599755691720114 1.103339696154041 1.0273726874114215 1.1334038146212873 1.021735900146331 1.1151293286793156 1.0 12.179956611662398 -8.900293899992034 7.019776594232712 1.0095082656938041 1.086403114826558 0.005369319936998296 0.044468569058211706 0.11134276213460985 6.843547761767897 0.005115552537894643 0.005425171216586793 1.2580737477326507e-09 8.900293899992034 0.0768948491327539 NLNIINTHAYNQPEDLVYS(ph)QPEMR ddPTM_A549_MK2206_60min_R1 3 NLNIINTHAYNQPEDLVYSQPEMR 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 NLNIINTHAYNQPEDLVY(0.458)S(0.542)QPEMR;NLNIINTHAYNQPEDLVY(0.472)S(0.528)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR 152.21 5.9587e-29 33550600.0 1926.71 2652.58 3092.31 2705.7599999999998 4159.3 2876.08 3071.6099999999997 2474.54 4095.2999999999997 3852.6 3907.8999999999996 True False 2251.8915444630957 2787.584991914768 3530.8460567169864 3368.6713214661827 3547.4724797913937 3180.4248766126093 3629.681777436158 2825.313622960919 3167.7210888502655 2982.2949842530966 2937.4605774468328 0.7666116651071394 0.9489778393341596 1.202006278424989 1.1467971169826379 1.207666413305457 1.0827123608164149 1.2356529327760328 0.9618218009981298 1.078387609069998 1.0152629816210956 1.0 11.520353774602329 -5.4408934320124756 3.66722579403192 1.0761051074588526 0.7760088002814571 0.5488712341258217 0.08939030728622331 0.15686934010789555 3.6697259960101487 0.013066910097201968 0.0934675020521251 3.623318971838543e-06 5.4408934320124756 -0.30009630717739544 NLNIINTHAYNQPEDLVYS(ph)QPEMR ddPTM_A549_PD325901_60min_R1 5 NLNIINTHAYNQPEDLVYSQPEMR 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 NLNIINTHAYNQPEDLVY(0.467)S(0.533)QPEMR;NLNIINTHAYNQPEDLVY(0.168)S(0.832)QPEMR;NLNIINTHAYNQPEDLVY(0.476)S(0.524)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVY(0.037)S(0.963)QPEMR 134.67 2.7126e-23 56798900.0 7815.4 8030.6 7764.1 7478.8 9318.6 8301.8 8172.0 8623.2 8859.3 8708.2 10342.0 True False 8608.813654606603 8707.366845393148 8291.01851532609 7940.748490412842 8664.093683424784 8234.192893253014 8482.98993188999 8451.203511230473 8486.974430045633 8158.362765849291 9069.999563339521 0.9491525985737631 0.9600184415209768 0.9141145440445188 0.8754960168365328 0.9552474201260838 0.9078493152894079 0.9352800816196073 0.9317755146747536 0.9357193868398356 0.8994887716229866 1.0 13.146886765959664 -10.450924832592944 0.5714585846267712 1.0069016630510976 0.9266508942289808 0.0 0.037294060094939734 0.5873530542574449 0.30930119623188035 0.02384519208572897 0.0052218835158492575 3.5405861601603256e-11 10.450924832592944 -0.08025076882211679 NLNNS(ph)NLFSPVNR ddPTM_A549_MK2206_60min_R1 1 NLNNSNLFSPVNR 13 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 NLNNS(0.813)NLFS(0.187)PVNR 192.54 6.479e-26 62498000.0 6503.7 7790.0 7962.2 6504.7 9554.8 8189.0 6517.4 6787.0 11183.0 10174.0 10259.0 True False 7601.365559801235 8186.477726219766 9091.359686704109 8098.351792007082 8149.301577167022 9055.554544581742 7701.527217407948 7749.078034315782 8650.068355581405 7875.686333850125 7711.407166004002 0.9857300225712514 1.0616062088265976 1.1789495083055235 1.050178212312396 1.0567852794874446 1.17430636842825 0.998718787844635 1.004885083552306 1.1217237229692036 1.0213033969429541 1.0 12.91277842965046 -11.061679536567128 1.3537926154138387 0.9997586384363142 1.0773826640843367 0.10866738872138326 0.06271371240553547 0.6372551686042452 2.0729046702111127 0.045171699550797376 0.009879739619247655 8.676018380881731e-12 11.061679536567128 0.07762402564802251 NLNNS(ph)NLFSPVNR ddPTM_A549_PD325901_60min_R1 2 NLNNSNLFSPVNR 13 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 NLNNS(0.97)NLFS(0.03)PVNR;NLNNS(1)NLFSPVNR 201.3 1.3721e-30 19349300.0 9441.8 8976.7 9090.9 10053.5 11542.8 11355.5 10380.8 10523.400000000001 11551.1 10329.099999999999 11170.400000000001 True False 10400.324585314213 9733.198012731396 9707.86314202264 10674.481861844888 10732.07354849823 11263.024572904033 10775.847024591729 10313.502531552405 11065.647437032294 9676.918863224762 9796.511614999787 1.0616355080302162 0.9935371278311508 0.9909510163963452 1.0896207018731863 1.0954994971951006 1.1496974653364178 1.0999677689446565 1.052772960097453 1.129549769541363 0.9877923125623705 1.0 13.258052404128417 -6.265734769147967 24.662597314115246 1.0748662276587073 1.013190807628844 0.227847941174949 0.04932841226498808 384.23810326757564 2206164.43923712 0.00787632748424182 0.01891295360474657 5.423320004428188e-07 6.265734769147967 -0.06167542002986326 NLNNSNLFS(ph)PVNR ddPTM_A549_MK2206_60min_R1 1 NLNNSNLFSPVNR 13 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 NLNNSNLFS(1)PVNR 268.35 8.643699999999999e-83 53769000.0 5966.1 8165.1 7880.3 6512.5 11252.0 7359.1 7158.2 8118.0 11320.0 9625.3 11144.0 True False 6973.03182285932 8580.668714038133 8997.845035183038 8108.062792357234 9596.845705434269 8137.8350774247765 8458.752282758398 9268.751360332331 8756.038074325446 7450.938044938829 8376.637241246577 0.8324380801073846 1.0243572052740813 1.0741595673831537 0.9679376769992042 1.1456680561716799 0.9714918818919437 1.009802864699391 1.106500268949571 1.0452927376645487 0.8894903563747988 1.0 13.032155482161999 -5.262783688756612 6.0206303113566575 1.0312799435040867 0.8272546618328267 0.39517431501985145 0.06736033830813719 0.06910352333963053 12.13955791586994 0.006602529761523332 0.05756482963135326 5.46029757168909e-06 5.262783688756612 -0.20402528167126 NLNNSNLFS(ph)PVNR ddPTM_A549_PD325901_60min_R1 2 NLNNSNLFSPVNR 13 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR 232.53 9.4572e-47 131418000.0 10620.099999999999 11438.8 11564.6 12064.5 14001.8 12338.6 11954.1 12731.0 13923.1 13576.2 15282.099999999999 True False 11698.244733895599 12402.787820472087 12349.443299589148 12809.696764532511 13018.36187158771 12238.1185324498 12409.019817034517 12477.070217723713 13337.960525884491 12718.99641507121 13402.498581213584 0.8728405873732489 0.9254086277507388 0.9214284355082482 0.9557693057687013 0.9713384256451761 0.9131221658627215 0.9258736154188716 0.9309510567837662 0.9951846250952374 0.9490018848350824 1.0 13.710214361926544 -8.762508137498365 5.823763010402377 0.9978947615935745 0.928589767213368 0.40117325560426076 0.027596503828932455 0.07269195566076844 8.525915631964274 0.0040683166462265555 0.004456058612129227 1.7277936060477828e-09 8.762508137498365 -0.06930499438020654 NLPAPTSSLQPS(ph)PETLISDKK ddPTM_A549_MK2206_60min_R1 1 NLPAPTSSLQPSPETLISDKK 21 1 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8-2 Q9ULJ8-4 PPP1R9A Neurabin-1 1 NLPAPT(0.008)S(0.007)S(0.005)LQPS(0.976)PET(0.004)LISDKK 101.47 5.1806e-10 4358700.0 978.88 1101.4 1283.5 1422.1 2289.8 1192.5 1010.3 1085.0 1693.9 1391.7 1764.6 True False 1144.0910126817403 1157.4565555402378 1465.5195998448567 1770.5145638404947 1952.973453279718 1318.6895584825652 1193.858432464977 1238.8020726731434 1310.234354602462 1077.3140034223732 1326.4011195175608 0.8625528098904723 0.8726293566166684 1.1048841698640122 1.3348258967728157 1.4723852570254572 0.9941861018348654 0.9000734505555965 0.9339573485309791 0.9878115566420971 0.8122083037853695 1.0 10.373301414281602 -7.482030401414831 24.992390979467977 0.9806719742409461 1.1360371447885462 0.2097466100195805 0.1745846513728097 772.8643422552469 472864.7437012346 0.02685126503248399 0.042921509619518475 3.295866396971761e-08 7.482030401414831 0.15536517054760013 NLPAPTSSLQPS(ph)PETLISDKK ddPTM_A549_PD325901_60min_R1 1 NLPAPTSSLQPSPETLISDKK 21 1 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8-2 Q9ULJ8-4 PPP1R9A Neurabin-1 1 NLPAPT(0.016)S(0.013)S(0.011)LQPS(0.949)PET(0.007)LIS(0.005)DKK 62.677 0.00072471 1823500.0 1182.8 1451.0 1549.1 1310.9 2036.8 1304.8 1209.4 1259.7 1771.5 1638.3 1411.8 True False 1302.8769852686605 1573.2808622849427 1654.2312414950406 1391.8713157300906 1893.742194578542 1294.174141405061 1255.4243788090732 1234.5742952844678 1697.0500155571933 1534.857458405973 1238.157550137568 1.0522707591807696 1.2706628991683169 1.3360426072685532 1.1241471778574899 1.5294840259772546 1.0452418928926042 1.0139455828295734 0.9971059782717457 1.3706252611944572 1.239630173264654 1.0 10.273979187534366 NLQDGQIS(ph)DTGDLGEDIASN ddPTM_A549_MK2206_60min_R1 2 NLQDGQISDTGDLGEDIASN 20 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 NLQDGQIS(0.993)DT(0.007)GDLGEDIASN;NLQDGQIS(0.936)DT(0.064)GDLGEDIASN 177.44 8.135399999999999e-35 16716800.0 1895.75 1673.96 1717.83 2153.54 2380.33 1668.29 1669.29 1840.94 2643.6 2520.38 2620.21 True False 2215.7062533624235 1759.1574139387476 1961.4441248161206 2681.1573966760834 2030.1866102040844 1844.8273404787235 1972.578385360252 2101.898882642299 2044.828820961728 1951.0244075200692 1969.5395428828692 1.124986934823981 0.8931820741023663 0.99588969000597 1.3613117880088863 1.030792510635478 0.9366795133132483 1.0015429202670054 1.0672031898205465 1.0382268425891343 0.990599256851833 1.0 10.9436426672136 -6.977861586056433 24.998255541950556 1.0148115023254303 1.0879553835258946 0.11988032305571727 0.10991204630157977 476.5288829809907 538084.3384857066 0.015746590772321736 0.029756593040793457 1.0522971979017872e-07 6.977861586056433 0.07314388120046433 NLQDGQIS(ph)DTGDLGEDIASN ddPTM_A549_PD325901_60min_R1 1 NLQDGQISDTGDLGEDIASN 20 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 NLQDGQIS(0.983)DT(0.017)GDLGEDIASN 223.5 6.203999999999999e-75 17813000.0 996.06 1189.5 932.13 1072.9 917.9 983.86 909.07 1179.4 1401.4 1120.9 1430.1 True False 1097.179277939383 1289.7433395506137 995.3899471530386 1139.1705962673082 853.4298705830935 975.8477703577435 943.6651563121911 1155.8759417785989 1342.5040314997746 1050.126182706009 1254.2067661508256 0.8747993612780756 1.028333903435117 0.793641027952593 0.9082797406391254 0.6804538881593496 0.7780597240378722 0.7523999884072623 0.9215991915958123 1.070400884233733 0.837283142658254 1.0 10.292559492379743 -8.554759567185405 4.624078550368311 1.0326233812599621 0.8320691399927378 0.19941799373511548 0.10478985169179383 0.12079007765949236 6.16797184554444 0.015445039090941814 0.017780982895209633 2.7876640397543336e-09 8.554759567185405 -0.20055424126722432 NLQDGQISDTGDLGEDIAS(ph)N ddPTM_A549_MK2206_60min_R1 1 NLQDGQISDTGDLGEDIASN 20 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 NLQDGQISDT(0.004)GDLGEDIAS(0.996)N 65.47 0.0016644000000000001 1202000.0 1051.9 946.39 545.73 492.2 897.85 1133.5 903.17 953.79 1086.8 1133.8 1360.0 True False 1229.4350035141408 994.5572086414795 623.1227200805095 612.7890220956974 765.7774543747029 1253.4462176435954 1067.2642981781592 1088.9926533593703 840.6415352629768 877.6737925417017 1022.2744659094892 1.2026466907987834 0.972886677509498 0.6095454213718764 0.5994368856220194 0.7490918338583483 1.2261347215871612 1.0440095431989918 1.0652644565376321 0.8223246919457011 0.8585500487492463 1.0 9.997566875698448 NLQDPVPKES(ph)PK ddPTM_A549_MK2206_60min_R1 2 NLQDPVPKESPK 12 1 A0A087X0P0;Q02224-3;Q02224 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E 1 NLQDPVPKES(1)PK;NLQDPVPKES(1)PK 72.433 0.00053907 29736000.0 6207.6 7174.7 8246.0 6230.4 10033.8 8513.400000000001 7749.2 8242.7 11651.1 11325.8 10537.9 True False 7255.291118751197 7539.861584378558 9415.406794172732 7756.848279693279 8557.841311694483 9414.282337262453 9157.129332730487 9411.127967210059 9012.144452983506 8767.293913890286 7921.048598755586 0.9159508401313204 0.9518766979365696 1.1886566124151685 0.9792703810593837 1.0803924764505217 1.1885146543276426 1.1560501388880624 1.1881164280053234 1.1377463905977465 1.1068350111205791 1.0 12.951475713462727 -5.625045679724736 7.204996459041278 1.0901275241420048 0.9251106062856036 0.46136180773228386 0.07169337977395977 0.16737472346960866 10.111704731832264 0.011389040895060543 0.044791743422335564 2.371124294246101e-06 5.625045679724736 -0.16501691785640116 NLQDPVPKES(ph)PK ddPTM_A549_PD325901_60min_R1 2 NLQDPVPKESPK 12 1 A0A087X0P0;Q02224-3;Q02224 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E 1 NLQDPVPKES(1)PK;NLQDPVPKES(1)PK 82.529 0.00017900000000000001 37304000.0 6164.3 6060.7 6272.9 6735.9 7776.1 7166.200000000001 6766.299999999999 8048.4 7541.1 8164.0 9168.9 True False 6790.0951980821865 6571.4564590285 6698.616716012037 7151.9612446611645 7229.933562088668 7107.840843146038 7023.795249161426 7887.868348152347 7224.173791881661 7648.523646723042 8041.183426445921 0.844414912331294 0.8172250414554941 0.833038666172141 0.8894165031902799 0.8991131253530161 0.8839296986771503 0.8734778050282376 0.9809337668148012 0.8983968414552923 0.9511689065030532 1.0 12.973192124104182 -14.999999966983568 0.019155727096895597 2.1213019915798075 2.357502448059644e-12 0.705977620506491 0.03040886365563934 848.1204471315402 1.262248101068941 92.36203562639568 52.64903929055059 1.0000000760231475e-15 14.999999966983568 -2.12130199157745 NLQEAEEWYK ddPTM_A549_PD325901_60min_R1 1 NLQEAEEWYK 10 0 P08670;B0YJC4;B0YJC5;P41219;P41219-2;H7C5W5;F8W835 P08670 VIM;PRPH Vimentin;Peripherin 0 166.93 2.5611999999999994e-09 4367800.0 5188.7 4860.4 4490.2 4946.9 4851.3 4964.2 4829.3 4986.2 6894.2 5753.8 6212.9 False True 5715.4530042809465 5270.002965575282 4794.931973766078 5252.458777774954 4510.5614240764335 4923.773201075265 5013.081654194363 4886.74632940177 6604.460749226311 5390.50408605035 5448.752686818031 1.048947040321381 0.9671943779582451 0.880005434154918 0.9639745240194212 0.8278154071827614 0.9036514380597912 0.9200420614285411 0.8968559614063778 1.212105068597487 0.9893097367203691 1.0 12.411710294644543 -8.743065924788834 24.999945864691544 1.1001607321585716 0.9229380408048304 0.37664514834057594 0.07764999376531276 160.31490814971178 218133.32392264836 0.015244348766221312 0.01726941312562778 1.806899822431961e-09 8.743065924788834 -0.17722269135374114 NLQEEIDALESR ddPTM_A549_MK2206_60min_R1 1 NLQEEIDALESR 12 0 Q9NQP4;E9PQY2 Q9NQP4 PFDN4 Prefoldin subunit 4 0 58.223 0.034829 693580.0 197.04 394.58 296.97 305.95 442.78 404.19 259.05 278.05 366.37 249.94 321.65 False True 230.29553483451505 414.66243661255425 339.0848115044233 380.9077637346174 377.6476485471193 446.96111752039246 306.11603180248704 317.4644389924125 283.38777997266925 193.47838040913112 241.77542791160795 0.9525183631097123 1.7150727027733896 1.4024783843145188 1.5754610260637223 1.561976962709319 1.8486622953421037 1.2661172164873666 1.3130550185955048 1.1721115847896446 0.8002400495383095 1.0 7.917523818020021 -8.626318010872774 1.161314719191898 1.0599903101552675 1.5098585311998154 0.4502737253798149 0.23423837772052072 0.2850327254867088 0.7513910020141646 0.042796021693612546 0.048044146591643896 2.3641878937916224e-09 8.626318010872774 0.44986822104454793 NLQPLMRS(ph)PISR ddPTM_A549_MK2206_60min_R1 2 NLQPLMRSPISR 12 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 NLQPLMRS(0.998)PIS(0.002)R;NLQPLMRS(1)PISR 77.192 0.00030479 46383000.0 2008.91 2577.2 2630.1 2455.72 3208.9 2506.0 2617.8999999999996 2496.7 3463.3 3753.3 3710.3 True False 2347.9648948660465 2708.368471888778 3003.0877285173037 3057.3715102414585 2736.875060804127 2771.183256651829 3093.5385433535257 2850.6148708230753 2678.868079753651 2905.42692321994 2788.9301109293956 0.8418873193217452 0.9711137834810171 1.0767884490000867 1.096252465510011 0.9813351184666576 0.9936366801706435 1.1092205327162612 1.0221177144783753 0.9605361099783647 1.0417711479516862 1.0 11.445496066328808 -2.566122351049346 16.82462054394884 0.997311336953957 0.175597358001101 0.0 0.07242110658424879 0.0 0.0 0.009296488925568686 0.0 0.002715674091300479 2.566122351049346 -0.821713978952856 NLQPLMRS(ph)PISR ddPTM_A549_PD325901_60min_R1 3 NLQPLMRSPISR 12 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 NLQPLMRS(0.991)PIS(0.009)R;NLQPLMRS(0.963)PIS(0.037)R;NLQPLMRS(0.999)PIS(0.001)R 70.373 0.00086384 85387000.0 5222.969999999999 6226.4 7316.3 5819.0 7227.4 6874.7 7236.4 7379.5 8348.5 7520.6 7829.700000000001 True False 5753.202069452707 6751.120579552696 7812.828114485942 6178.426414092146 6719.772357176434 6818.714722499519 7511.785161910019 7232.310083394242 7997.641577690786 7045.748032526372 6866.696536557668 0.8378413169743534 0.9831686231669543 1.1377855527605094 0.8997669230318779 0.978603367922403 0.9930123875720008 1.093944536782419 1.0532444596743253 1.164700017703137 1.0260753471506205 1.0 12.745400491923665 -7.682673927785785 4.759438125255674 1.0786263158095146 0.9752099879632847 0.26452792305091855 0.07886045447267466 0.23824697236730003 9.86211875357068 0.013485421639050449 0.02005098831856608 2.0764719662143748e-08 7.682673927785785 -0.1034163278462299 NLRGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 NLRGSPK 7 1 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NLRGS(1)PK;NLRGS(1)PK 66.692 0.0067149 11569400.0 2990.5 2793.9 2346.6000000000004 2630.8 3093.8999999999996 2852.3 2340.9 2643.3999999999996 2707.5 3196.5 3269.8 True False 3294.093358510256 3029.3517581929013 2505.8543872521223 2793.2985410196998 2876.5951373755656 2829.0718144770526 2429.9842304896306 2590.6753132928175 2593.7131905848737 2994.6724444818965 2867.6353289699814 1.1487141775776117 1.056393652145793 0.8738399760726179 0.9740773217573022 1.00312445878842 0.9865521553234663 0.8473825824158926 0.9034186763989114 0.9044780430698987 1.0443003035387854 1.0 11.485645855934392 -5.549682592222791 4.8095655266840875 0.9460988540367735 1.1309745726141216 0.5326249020743592 0.05820837211979949 0.09154405912369586 5.25684285214571 0.007765408314905328 0.035663726110797093 2.8204435230585555e-06 5.549682592222791 0.18487571857734808 NLRKS(ph)REDLSAQPVQTK ddPTM_A549_MK2206_60min_R1 4 NLRKSREDLSAQPVQTK 17 3 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 NLRKS(0.954)REDLS(0.046)AQPVQTK;NLRKS(0.983)REDLS(0.017)AQPVQTK;NLRKS(0.925)REDLS(0.075)AQPVQTK;NLRKS(0.708)REDLS(0.292)AQPVQTK 96.131 4.4005e-07 51562400.0 6555.35 8483.3 9852.4 8133.0 8935.0 7391.9 7150.34 6289.77 10190.2 15712.7 16046.0 True False 7661.732817079977 8915.063734896037 11249.618469428502 10125.585365104243 7620.673336122926 8174.105951653895 8449.46422249988 7181.364159112771 7882.135970405583 12163.19015705592 12061.335352929153 0.635230892176403 0.7391440063666724 0.9327009108238151 0.8395078213827457 0.6318266687006766 0.6777115230171239 0.7005413559326902 0.5954037383902722 0.6535044205110646 1.0084447369338778 1.0 13.558102021480614 -10.772848221361176 1.026770420256361 0.9996559138593432 0.7133646889145249 0.5852056349925476 0.09441108065512696 0.3432551049743851 0.6438613332012909 0.0706004001187537 0.01796272998474974 1.6871425503981803e-11 10.772848221361176 -0.2862912249448183 NLRKS(ph)REDLSAQPVQTK ddPTM_A549_PD325901_60min_R1 5 NLRKSREDLSAQPVQTK 17 3 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 NLRKS(0.977)REDLS(0.023)AQPVQTK;NLRKS(1)REDLSAQPVQTK;NLRKS(0.966)REDLS(0.034)AQPVQTK;NLRKS(0.985)REDLS(0.015)AQPVQTK;NLRKS(0.939)REDLS(0.061)AQPVQTK 171.39 2.2213999999999998e-30 239098000.0 20900.8 20930.800000000003 23029.9 25054.1 27195.2 35240.0 27406.399999999998 30729.1 30871.7 25314.9 28695.4 True False 23022.633829644266 22694.711972648995 24592.84750403891 26601.63485501049 25285.1029703468 34953.01712378477 28449.365549357513 30116.183993987404 29574.269808228648 23716.512893732153 25166.04771512791 0.9148291416377159 0.9017988136057878 0.9772232724988265 1.0570446005718894 1.0047307887422992 1.3888957662101897 1.1304661689986355 1.196698994410785 1.1751654508089824 0.9424011732869597 1.0 14.61919104104231 -6.2952366368616754 1.545106481409651 1.1158505762891966 0.907333631760443 0.36129662374012217 0.11262534451194332 0.3659939204008622 1.6347325398099293 0.016960558955649588 0.06303216116644007 5.067145361935755e-07 6.2952366368616754 -0.20851694452875358 NLS(ph)DSEKELYIQHAK ddPTM_A549_MK2206_60min_R1 1 NLSDSEKELYIQHAK 15 1 Q00059;Q00059-2 Q00059 TFAM Transcription factor A, mitochondrial 1 NLS(0.909)DS(0.091)EKELYIQHAK 99.34299999999999 4.162e-06 28458000.0 4080.5 4504.3 4317.4 4424.5 6682.8 5247.7 4667.8 4222.3 9938.3 7495.3 6598.3 True False 4769.188641353222 4733.549630579169 4929.672240257255 5508.50269862335 5699.76897265163 5803.008130858664 5515.878839018135 4820.823955251438 7687.290918203937 5802.106524288075 4959.760006184252 0.9615764947107502 0.9543908625975804 0.9939336246331514 1.1106389607067435 1.1492025754360435 1.1700179290173272 1.11212615774563 0.9719873439925365 1.5499320347393353 1.1698361447032746 1.0 12.2760545975596 -6.59005004637324 0.6917607591099685 1.2348169906629978 0.924888769854125 0.1924416596127656 0.14659591317859205 1.1839078055140064 0.9064434244866826 0.037923728871705455 0.20425192103883 2.5700995976215946e-07 6.59005004637324 -0.3099282208088727 NLS(ph)DSEKELYIQHAKEDETR ddPTM_A549_PD325901_60min_R1 1 NLSDSEKELYIQHAKEDETR 20 2 Q00059;Q00059-2 Q00059 TFAM Transcription factor A, mitochondrial 1 NLS(0.855)DS(0.145)EKELYIQHAKEDETR 63.361000000000004 0.00041006 9961600.0 2172.0 2556.2 1946.5 2621.1 2287.1 3375.9 3151.4 3127.5 2994.6 2837.2 3095.8 True False 2392.49984105811 2771.61994498468 2078.6011952553717 2782.999394049996 2126.461986066666 3348.407789676078 3271.32825151225 3065.119559023714 2868.747376002015 2658.0587078004182 2715.036225893103 0.8812036532849961 1.0208408707596393 0.7655887517934027 1.025032140458655 0.7832168004930294 1.2332829145123576 1.2048930398474356 1.1289424169710487 1.0566147694984618 0.9790140855030609 1.0 11.406755732256242 -7.250142497684059 24.985687930979957 1.0636303443492594 0.9021726977732434 0.4568308726459529 0.10731548620191128 659.1937142161242 1457960.2577196287 0.016011383402011626 0.027575322130204864 5.621568439338884e-08 7.250142497684059 -0.16145764657601602 NLS(ph)FEIK ddPTM_A549_MK2206_60min_R1 2 NLSFEIK 7 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 NLS(1)FEIK;NLS(1)FEIK 105.4 0.0098229 147000000.0 5444.799999999999 7523.5 7179.9 6310.6 9784.4 7655.5 6412.0 6986.0 10307.1 9320.5 8470.2 True False 6363.749127420663 7906.414014533308 8198.117783347172 7856.6972832936035 8345.127721316307 8465.599928690379 7576.9774017276395 7976.286893727715 7972.558307056524 7214.9925766316155 6366.815574372461 0.9995183703821827 1.2418160887772527 1.2876323630836772 1.2340073607468975 1.3107223892124182 1.3296442828917316 1.1900733283725526 1.2527906298768345 1.2522050016883568 1.1332184028815306 1.0 12.63635625937672 -10.647969541225399 0.7660882530897348 0.9882022616744304 1.2408793641699596 0.2903011498308744 0.09152049008353248 0.45485621001522203 0.4411934944352808 0.07009717493143162 0.015711362811021132 2.2492123463837825e-11 10.647969541225399 0.2526771024955292 NLS(ph)FEIK ddPTM_A549_PD325901_60min_R1 4 NLSFEIK 7 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK 102.06 0.010768000000000002 257522300.0 13159.25 14685.61 15665.920000000002 15295.93 19812.1 19296.4 17855.199999999997 19210.37 18002.2 17258.05 17568.3 True False 14495.167372672158 15923.217893852781 16729.103538029816 16240.724856522515 18420.566444034528 19139.256516101035 18534.689406740345 18827.204100106264 17245.63013833684 16168.373777722767 15407.51047462945 0.9407858197818793 1.0334711710936373 1.085775899070557 1.0540784562999366 1.1955576129165373 1.2422030507534887 1.202964582581996 1.2219497842372267 1.1193002378115597 1.0493826244250284 1.0 13.911346151456934 -5.313188000317274 1.4383322995909786 1.1024381647438728 0.8857608495335865 0.3137607622363532 0.07884981066627053 1.4242076701742812 2.8054930591865372 0.014365164099739971 0.4287240134322715 4.861966920352697e-06 5.313188000317274 -0.21667731521028633 NLS(ph)FEIKK ddPTM_A549_MK2206_60min_R1 2 NLSFEIKK 8 1 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 NLS(1)FEIKK;NLS(1)FEIKK 69.815 0.0028816999999999996 22126000.0 5990.7 8301.0 7598.1 7772.7 10633.4 9011.2 8020.1 8667.8 11964.300000000001 10999.2 10978.4 True False 7001.7837014470615 8723.485443562302 8675.62483177344 9677.011848929764 9069.240945979802 9964.759202849547 9477.24835614408 9896.487194024205 9254.40515306113 8514.473080723836 8252.160291574064 0.848478877536624 1.0571153655933572 1.0513155980055016 1.1726640669850483 1.099014152117237 1.2075334034681982 1.1484566490814414 1.1992601748331397 1.1214524228898481 1.0317871660124693 1.0 13.010556129349045 -5.104044727516622 1.8779268325544756 1.0944281997205283 0.6901790448233801 0.5591058624777012 0.06616322944695202 0.9949604454223234 2.532056947041299 0.011350560970214975 0.8020190324484265 7.869647368785628e-06 5.104044727516622 -0.4042491548971482 NLS(ph)FEIKK ddPTM_A549_PD325901_60min_R1 1 NLSFEIKK 8 1 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 NLS(1)FEIKK 69.815 0.0028816999999999996 31093000.0 5157.8 6000.6 6982.1 6379.9 8013.8 7951.7 8294.1 8260.7 7683.7 7896.0 7608.0 True False 5681.416059028323 6506.29162110753 7455.94729277808 6773.971933195823 7450.938334109155 7886.943991577732 8609.736514205675 8095.9338581062175 7360.780809786513 7397.4452124602085 6672.26423108558 0.851497462069777 0.9751249944202155 1.1174538409377404 1.0152433564660697 1.1167031274624573 1.1820491093312897 1.290377031846784 1.2133712901218552 1.103190844195466 1.1086858907649466 1.0 12.703960707336838 -5.453936669777692 2.2911285676739177 1.0916911794485227 0.834498121460108 0.46978567923037096 0.0849110088184105 0.3627090478619608 2.913433312249454 0.014439077335120289 0.15701458929285164 3.516117099438527e-06 5.453936669777692 -0.25719305798841463 NLS(ph)FNELYPSGTLK ddPTM_A549_MK2206_60min_R1 2 NLSFNELYPSGTLK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NLS(1)FNELYPSGTLK;NLS(1)FNELYPSGTLK 150.59 1.7377e-13 32640000.0 3980.5 5350.9 5419.6 5483.700000000001 7930.8 5136.0 5386.4 5628.700000000001 8995.0 7038.799999999999 6799.8 True False 4652.3110861184905 5623.237954458199 6188.180773914447 6827.206746172647 6764.189825867233 5679.488110999119 6365.03915730907 6426.585462170805 6957.646862063375 5448.730191341092 5111.22199506716 0.910215030888589 1.100174862270742 1.2107047551224854 1.3357288634227948 1.3233997334483518 1.1111800889259738 1.2453067316293382 1.2573481387372927 1.361249202006526 1.066032779753973 1.0 12.319452537754708 -5.368309540208545 2.4714461215434986 1.2035235497218992 0.8796816735376461 0.4000035454850044 0.10900124470613375 0.4272116337395351 3.7343257859526315 0.01972334037161398 0.26106108520892396 4.2824318440676015e-06 5.368309540208545 -0.3238418761842531 NLS(ph)FNELYPSGTLK ddPTM_A549_PD325901_60min_R1 4 NLSFNELYPSGTLK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NLS(1)FNELYPSGTLK;NLS(0.993)FNELY(0.007)PSGTLK;NLS(0.99)FNELY(0.006)PS(0.004)GTLK;NLS(0.987)FNELYPS(0.013)GTLK 173.58 1.066e-22 52044000.0 13260.099999999999 14363.2 14573.400000000001 13765.0 18178.7 16503.4 17752.8 16982.1 16119.800000000001 15742.6 15943.199999999999 True False 14606.255590430312 15573.637271654783 15562.438560973373 14615.232787416813 16901.89082511044 16369.001782084822 18428.39251870492 16643.378693300263 15442.340864114514 14748.609549351073 13982.287472271759 1.0446256107518848 1.1138118353337267 1.1130109141179658 1.0452676514054118 1.2088072755354615 1.1706955542536335 1.317981235563224 1.1903187319174855 1.1044216402171807 1.0548066315042517 1.0 13.771312781388781 -9.76735949941972 1.0638024254464682 1.0179201339014554 1.1494423653288357 0.267241115719173 0.07510170028014718 0.38638946069839103 0.8968514428898038 0.024568907584721144 0.015585688192025866 1.7086003877282727e-10 9.76735949941972 0.1315222314273803 NLS(ph)GMAER ddPTM_A549_MK2206_60min_R1 2 NLSGMAER 8 0 C9J494;Q9H000-2;Q9H000 C9J494 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 1 NLS(1)GMAER;NLS(1)GMAER 76.143 0.0047079999999999995 10121900.0 2346.58 3515.0 3089.9 2565.6 3800.6 2882.6000000000004 2682.5 2948.4 3725.8999999999996 4408.3 4033.9 True False 2742.6253356271636 3693.898486221117 3528.094282478089 3194.17211517416 3241.536774624377 3187.6348186849823 3169.8755271575787 3366.3447290963086 2881.98959903968 3412.4619683026845 3032.1713000237387 0.9045087049025534 1.218235422976333 1.1635537485795964 1.0534273295011904 1.069048036500774 1.0512713508831202 1.0454143956618684 1.1102092843731994 0.9504705750025129 1.1254185963292933 1.0 11.566135544343194 -8.762257011052137 24.99982802104092 0.9766111015562161 1.0815985067806844 0.0 0.08744862883840744 19.656761086790322 601022.5226293417 0.012389478540166228 0.013573481031864428 1.7287929743520094e-09 8.762257011052137 0.10498740522446826 NLS(ph)GSTLYPVSNIPR ddPTM_A549_MK2206_60min_R1 2 NLSGSTLYPVSNIPR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NLS(0.742)GS(0.254)T(0.004)LYPVSNIPR;NLS(0.603)GS(0.133)T(0.263)LYPVSNIPR 178.12 8.9085e-28 22631000.0 3454.1000000000004 4952.6 3921.6000000000004 4476.299999999999 6611.6 5017.700000000001 3890.3 4418.5 7093.0 5686.3 7332.5 True False 4037.0676353628614 5204.666185735051 4477.741848657261 5572.993700948744 5639.04239833356 5548.669683520308 4597.11715314115 5044.835906088739 5486.446825193496 4401.760880693135 5511.6378832950895 0.7324624223950889 0.944304813911955 0.8124158269229904 1.0111320480323307 1.0231155452764076 1.0067188376684644 0.8340745982377201 0.9153061236803756 0.9954294787438878 0.7986302754094535 1.0 12.428265390205063 -4.177877708854381 0.6441153275566425 0.9837372028809447 5.085824638901276e-16 0.1981204129668067 0.08865721019809465 6.757664541015192 0.6848317578878309 0.011463977946951122 6.787751092761776 6.639299973214899e-05 4.177877708854381 -0.9837372028809441 NLS(ph)GSTLYPVSNIPR ddPTM_A549_PD325901_60min_R1 2 NLSGSTLYPVSNIPR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NLS(0.99)GS(0.005)T(0.005)LYPVSNIPR;NLS(0.86)GS(0.07)T(0.07)LYPVSNIPR 176.29 1.4803999999999999e-27 12696500.0 6239.4 6604.6 6976.7 7402.9 7986.299999999999 7816.7 6809.3 8328.2 8581.0 9226.0 9695.3 True False 6872.8192947964835 7161.192820845713 7450.1808163052465 7860.16031979425 7425.369839239306 7753.043386818628 7068.431637691932 8162.087517653495 8220.37041123132 8643.468785480985 8502.839563570451 0.8082969510847149 0.8422119184192436 0.8761991521308701 0.9244159272944894 0.873281188445863 0.9118181436747027 0.8313024825231217 0.9599249117463213 0.9667794328909438 1.016539089190045 1.0 13.053729001225564 -6.682017953975256 0.1741406773414317 1.0373173930567585 0.7245559895355237 0.7428269533649882 0.033846844983806905 3.5316706122150614 0.1835916275698784 0.07247478500542058 0.27119263111059705 2.0796107130639062e-07 6.682017953975256 -0.3127614035212348 NLS(ph)LVR ddPTM_A549_PD325901_60min_R1 1 NLSLVR 6 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L0N7 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 NLS(1)LVR 83.206 0.04123 9187300.0 1094.1 1037.8 1354.4 881.18 1140.6 1262.9 978.07 861.63 943.63 1010.7 1188.4 True False 1205.1722265661497 1125.2590481594161 1446.3177286688303 935.60848729502 1060.4881908563855 1252.6153611131606 1015.2909890704402 844.4441137143408 903.9725126617188 946.8842295128593 1042.2343338882883 1.1563351804675106 1.0796603139731402 1.3877087730098263 0.8976949394907413 1.0175141581644092 1.2018557827009966 0.9741484770345936 0.8102248086224075 0.8673409455714697 0.9085137561917538 1.0 10.025463971424326 -7.9156505614014305 6.1890995108759395 0.9245489099387665 1.1176741166880502 0.4292971126364674 0.12203334353856812 0.18035573237109462 10.677432568093398 0.019507027621696035 0.027043002751587192 1.2143655507054794e-08 7.9156505614014305 0.19312520674928368 NLS(ph)NEELTK ddPTM_A549_MK2206_60min_R1 4 NLSNEELTK 9 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 NLS(0.973)NEELT(0.027)K;NLS(0.998)NEELT(0.002)K;NLS(0.98)NEELT(0.02)K;NLS(0.967)NEELT(0.033)K 134.49 4.615e-05 194471000.0 43495.6 50724.3 50888.6 46146.6 71178.0 58074.0 56614.5 53413.1 82416.0 74535.0 72227.0 True False 50836.59391467792 53305.95020899734 58105.36868614336 57452.51907159956 60707.81048892648 64219.35213359868 66900.62182004206 60984.5704957584 63748.90759130791 57697.4917331943 54291.04253620934 0.9363716653768902 0.9818553433274929 1.0702570068974098 1.0582320100646747 1.1181920194005759 1.1828719643902155 1.2322589269753437 1.123289729702369 1.1742067312262545 1.0627442214747127 1.0 15.728426567365403 -5.693023388709496 1.3234015495493021 1.1070817675402758 0.9166872010317424 0.500907245618122 0.06142982832349024 0.6293538853779409 1.557568214395948 0.012047523810452892 0.13002657008193413 2.0275735226351732e-06 5.693023388709496 -0.19039456650853337 NLS(ph)NEELTK ddPTM_A549_PD325901_60min_R1 2 NLSNEELTK 9 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 NLS(1)NEELTK;NLS(0.772)NEELT(0.228)K 148.92 2.5441e-05 345030000.0 34751.0 35035.0 39181.0 39634.0 46051.0 43089.0 44230.0 42677.0 44032.0 41189.0 44188.0 True False 38278.89593766593 37987.522405343196 41840.05827449308 42082.10216465512 42816.53662732545 42738.097470112436 45913.19685358469 41825.77375554115 42181.48816540466 38588.31951064129 38753.15613081094 0.9877620240389159 0.9802433194632367 1.0796555029805142 1.08590128821011 1.1048528920534524 1.1028288205959371 1.1847601960110061 1.0792869002555203 1.0884658793472568 0.9957464981790581 1.0 15.242026190551762 -5.757989712388236 24.741595142066277 1.067697880373637 0.9840026319063513 0.33593913980589607 0.049677597327653325 81.539815500811 584784.0511689992 0.007932569963116514 0.028402968956250788 1.7458635086226644e-06 5.757989712388236 -0.08369524846728571 NLS(ph)PGAVESDVR ddPTM_A549_MK2206_60min_R1 2 NLSPGAVESDVR 12 0 A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2;A0A3B3IU78 A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin 1 NLS(0.999)PGAVES(0.001)DVR;NLS(0.717)PGAVES(0.283)DVR 127.66 9.2394e-08 49111000.0 3475.1000000000004 4060.1 4197.6 3718.8 5534.6 4544.4 4004.6 4312.0 5650.1 5646.299999999999 5646.0 True False 4061.6119219621555 4266.741747910771 4792.882798838159 4629.906166943279 4720.467671640285 5025.285391671421 4732.183983617987 4923.239204946169 4370.361371355676 4370.796908474342 4243.942378327184 0.9570374806933885 1.0053722146888746 1.1293468128394684 1.0909446345424294 1.1122836388511312 1.1841078279795627 1.115044353048745 1.1600626884304541 1.029788103079364 1.0298907286760004 1.0 12.051189353010438 -8.932254792972179 8.442197564658985 1.0130600983932458 1.0967225435649453 0.22600547049934339 0.06152529211674439 0.2760921194372909 30.925803121958392 0.011257095123055297 0.011938343396094805 1.1688134674232976e-09 8.932254792972179 0.0836624451716994 NLS(ph)PGAVESDVR ddPTM_A549_PD325901_60min_R1 2 NLSPGAVESDVR 12 0 A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2;A0A3B3IU78 A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin 1 NLS(1)PGAVESDVR;NLS(1)PGAVESDVR 200.96 1.1587000000000001e-24 67913000.0 11979.599999999999 11933.0 13581.3 13480.7 16908.300000000003 15347.599999999999 14424.099999999999 15593.4 15992.2 14276.8 14118.6 True False 13195.760173084596 12938.63578886715 14503.008688991416 14313.372222108963 15720.719338468367 15222.614234080564 14973.017018670382 15282.377404214343 15320.10344837356 13375.360411506075 12382.101705179404 1.0657124684709092 1.0449466574365924 1.1712881249331721 1.1559727551035792 1.2696325480748092 1.2294047163021589 1.209246812470229 1.2342312935308681 1.237278114261103 1.0802172950906381 1.0 13.59596859412531 -4.081244955130285 16.036120663868505 1.1430446337177824 1.1550434283908748 0.0 0.0884398088816485 0.0 0.0 0.014659968856624675 0.0 8.293828387352726e-05 4.081244955130285 0.011998794673092394 NLS(ph)PPNCTELQIDSCSSSEEIKK ddPTM_A549_MK2206_60min_R1 1 NLSPPNCTELQIDSCSSSEEIKK 23 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2;A0A0U1RRA9;A0A0A0MSN1 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NLS(0.838)PPNCT(0.162)ELQIDSCSSSEEIKK 86.546 1.5218e-06 3313000.0 1183.8 2013.4 890.18 1509.6 2419.4 1302.9 1410.0 1505.6 2269.7 1767.9 2282.7 True False 1383.5964988687529 2115.873460073285 1016.4209095363418 1879.4520677685186 2063.5094649598013 1440.7720132049753 1666.1787486643752 1719.0234107066212 1755.61657396612 1368.5301621401259 1715.8425906849918 0.8063656342254559 1.2331396082367874 0.5923742160582285 1.0953522648124798 1.2026216601465844 0.8396877551744395 0.9710557120506084 1.0018537947705095 1.0231804382855714 0.7975849122580567 1.0 10.744701492479452 NLS(ph)PPNCTELQIDSCSSSEEIKK ddPTM_A549_PD325901_60min_R1 1 NLSPPNCTELQIDSCSSSEEIKK 23 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2;A0A0U1RRA9;A0A0A0MSN1 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NLS(0.928)PPNCT(0.072)ELQIDSCSSSEEIKK 110.75 4.6952e-11 4598900.0 1299.4 1443.9 1598.9 1763.1 1732.2 1959.2 1908.5 2166.5 1817.7 1860.2 2001.2 True False 1431.314131432278 1565.5825203674901 1707.410968966768 1872.0026827093761 1610.5362477655876 1943.2449247706893 1981.1290118712732 2123.2874579136296 1741.3083902220212 1742.7466545362815 1755.0650866520052 0.8155333624479303 0.8920367297340661 0.9728476635723277 1.0666286378475247 0.9176504392995911 1.1072210025427942 1.128806576427608 1.2098055360237678 0.9921617172294012 0.9929812106631198 1.0 10.777308818581615 -5.638945731142521 1.5985584735465383 1.027628073519938 0.8009391898877053 0.4797482893468451 0.07811777889002669 0.42761591806985044 1.6571087086802576 0.012138433842145637 0.12035730765406027 2.2964355897032893e-06 5.638945731142521 -0.2266888836322326 NLS(ph)PSFSR ddPTM_A549_MK2206_60min_R1 1 NLSPSFSR 8 0 Q1ED39;H3BNU8 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 NLS(0.612)PS(0.388)FSR 107.95 0.0017882000000000002 17181000.0 3130.3 3141.7 3322.3 3240.1 4903.7 4053.5 3681.8 3764.3 5425.8 5297.5 4914.9 True False 3658.6181115128006 3301.5991107143327 3793.4520970506983 4033.924645453615 4182.37222589211 4482.438679504466 4350.735402008864 4297.901052685266 4196.864963222174 4100.791070726462 3694.3946856606954 0.9903159848386647 0.8936779612446535 1.0268128935369254 1.0919040840738432 1.1320859252330118 1.2133080141389492 1.1776585265498754 1.163357307048703 1.1360088242633497 1.1100035106273676 1.0 11.85112228758996 -6.018237021908971 3.3905263491813837 1.0974057833774082 0.9424110142006149 0.5507983705708182 0.061579909526877835 0.1921817489817712 4.591107921468557 0.011443214203317661 0.0370588362746442 9.58877168895695e-07 6.018237021908971 -0.15499476917679333 NLS(ph)PSFSR ddPTM_A549_PD325901_60min_R1 2 NLSPSFSR 8 0 Q1ED39;H3BNU8 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 NLS(0.991)PS(0.009)FSR;NLS(0.995)PS(0.005)FSR 140.49 0.0010955 62396000.0 6639.4 7422.4 9104.6 7050.200000000001 9318.2 8303.1 8303.0 8882.2 9483.3 7844.7 7760.5 True False 7313.427000332054 8047.91169691506 9722.492906407439 7485.6748418340685 8663.721778044861 8235.482306484031 8618.97520857594 8705.037553048893 9084.749880064088 7349.38430321512 6806.007697862726 1.0745546177722767 1.1824717300044087 1.4285162958984854 1.0998628232796117 1.2729520980068108 1.2100312947148444 1.2663775286769856 1.2790225840888358 1.3348133418827826 1.0798377888292765 1.0 12.732593067710836 -10.904449900838756 1.1467972277358291 0.9994853592316792 1.2481397697783314 0.37190428655535823 0.09762255690526858 0.33539467021372016 0.7807818970425342 0.06618020385967047 0.015626987562862415 1.2460919751369781e-11 10.904449900838756 0.24865441054665216 NLS(ph)SDEATNPISR ddPTM_A549_MK2206_60min_R1 2 NLSSDEATNPISR 13 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NLS(0.5)S(0.5)DEATNPISR;NLS(0.5)S(0.5)DEATNPISR 207.08 1.469e-31 116346000.0 8965.5 10257.8 9276.2 8685.1 13106.4 10568.9 10450.8 10631.2 15396.3 15643.3 13464.0 True False 10478.657214569854 10779.878205393736 10591.704645174032 10812.94988988896 11178.465921943096 11687.293982931971 12349.575082653655 12138.205156684535 11909.062632838952 12109.467665256312 10120.51721250394 1.0353875196836215 1.0651509185790575 1.0465576435251684 1.0684187045825597 1.1045350437359125 1.1548119268541208 1.2202513787927463 1.1993660898760918 1.1767247051489873 1.196526561932528 1.0 13.304995400890695 -6.682079785187947 3.2457099014659847 1.1115554624222155 1.0514656914681406 0.22690581387978948 0.06452931120644588 0.4943672624759058 10.418597219507337 0.01241897315030806 0.027077113145455575 2.0793146565753045e-07 6.682079785187947 -0.06008977095407486 NLS(ph)SDEATNPISR ddPTM_A549_PD325901_60min_R1 2 NLSSDEATNPISR 13 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NLS(0.9)S(0.097)DEAT(0.002)NPISR;NLS(0.5)S(0.5)DEATNPISR 235.02 2.2662999999999998e-56 175117000.0 35711.0 34974.0 39880.0 39228.0 46692.0 40042.0 40278.0 41029.0 40258.0 39850.0 43052.0 True False 39336.35443095127 37921.38172126368 42586.49661792151 41651.024466748044 43412.51499865538 39715.911227882774 41810.8013309673 40210.64440837215 38566.096260966115 37333.86419915647 37756.87692911361 1.0418328429229737 1.0043569491316486 1.127913643331127 1.103137437583767 1.1497909395461894 1.0518854963149398 1.1073691664028436 1.0649886240290833 1.021432369350139 0.9887964057315619 1.0 15.204451816250856 -8.75028879888187 2.3588600105923043 1.0086048747170995 1.084800303854264 0.4462543683267731 0.03915410724957905 0.2050852554965951 2.2437175648130294 0.007292488235885196 0.007924031924226865 1.7770972757769883e-09 8.75028879888187 0.07619542913716448 NLSDS(ph)EKELYIQHAK ddPTM_A549_MK2206_60min_R1 1 NLSDSEKELYIQHAK 15 1 Q00059;Q00059-2 Q00059 TFAM Transcription factor A, mitochondrial 1 NLS(0.423)DS(0.575)EKELY(0.002)IQHAK 92.31 1.1544000000000002e-05 55294000.0 3528.6 5110.4 4344.7 5019.2 6283.1 4170.8 4108.3 4595.1 9667.0 5976.9 6423.7 True False 4124.14141401274 5370.497531716757 4960.8437907642765 6248.90422532045 5358.864313172242 4612.151287647029 4854.724931303445 5246.4694969035545 7477.439935026869 4626.714138862667 4828.518004899105 0.8541215772268652 1.1122455225946657 1.0274050517634834 1.2941660813898166 1.109836249494159 0.9551898290463976 1.0054275300159905 1.0865589589974374 1.5485993688829818 0.9582058375195693 1.0 12.237364741826093 -8.555363537059051 24.999556261856995 1.262140756962497 1.0594999873820348 0.007065379455065579 0.18104534101771902 262.4931600609868 202007.61581973368 0.03638875891382507 0.041261123049054174 2.7837899520542314e-09 8.555363537059051 -0.20264076958046218 NLSDS(ph)EKELYIQHAK ddPTM_A549_PD325901_60min_R1 1 NLSDSEKELYIQHAK 15 1 Q00059;Q00059-2 Q00059 TFAM Transcription factor A, mitochondrial 1 NLS(0.425)DS(0.575)EKELYIQHAK 61.648 0.0021694 79406000.0 1441.0 2446.2 1793.6 3141.5 2277.8 2457.0 1934.9 1915.1 3495.9 2181.4 2215.2 True False 1587.2892591918683 2652.3498589396463 1915.3244817929801 3335.543320135846 2117.815185983407 2436.991006615753 2008.533678317906 1876.901828133113 3348.9794803197246 2043.666031719947 1942.7444433097762 0.8170345125206828 1.3652592692124466 0.9858859657989386 1.716923361496386 1.0901151684034003 1.254406370847186 1.033864070611391 0.9661084527080207 1.723839433360675 1.0519479485620016 1.0 10.923880419955843 NLSEGNNANYTEY(ph)VATR ddPTM_A549_MK2206_60min_R1 2 NLSEGNNANYTEYVATR 17 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 NLSEGNNANYTEY(0.997)VAT(0.003)R;NLSEGNNANYT(0.001)EY(0.998)VAT(0.002)R 226.93 1.2246999999999998e-63 12578600.0 3066.6 3575.6 3517.3 3085.0 4626.2 3164.3 4080.3 3461.1000000000004 5880.5 5411.8 5956.1 True False 3584.167108828277 3757.5827673775875 4016.10602924372 3840.825138490915 3945.6921082900853 3499.1441257076563 4821.637693741315 3951.7215241742083 4548.576139228871 4189.270621341666 4477.035990002578 0.8005669636857695 0.8393014431352436 0.8970457325364068 0.8578946309718416 0.8813179338073209 0.7815760546757725 1.0769709478566285 0.8826646765848163 1.015979355400771 0.9357241332650653 1.0 12.128328200488879 -7.759226125111099 24.99999999815307 1.0011181811898275 0.8476667264777962 0.5958045780243226 0.056096549185177785 24.670508436577755 278665.2085553166 0.00758480923968793 0.010951759833499651 1.740900198843975e-08 7.759226125111099 -0.15345145471203137 NLSEGNNANYTEY(ph)VATR ddPTM_A549_PD325901_60min_R1 1 NLSEGNNANYTEYVATR 17 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 NLSEGNNANYT(0.001)EY(0.998)VAT(0.001)R 186.77 2.4616999999999996e-39 6930400.0 2511.6 2761.8 3215.8 2736.4 3207.6 3499.8 2944.3 3227.3 3476.3 3662.4 3523.7 True False 2766.5757830578027 2994.5465785379433 3434.043526176329 2905.421213184699 2982.3092416192694 3471.2987891549906 3056.3469476827813 3162.9289697321296 3330.2032001588886 3431.155438970907 3090.3072385746937 0.8952429546564432 0.9690125762120284 1.111230457383316 0.9401722834926706 0.9650526667357402 1.1232859781139486 0.9890107072630179 1.0234998417797871 1.0776285149223024 1.1102958942533556 1.0 11.59353456277015 NLSELQDT(ph)SLQQLVSQR ddPTM_A549_MK2206_60min_R1 1 NLSELQDTSLQQLVSQR 17 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 NLS(0.001)ELQDT(0.497)S(0.497)LQQLVS(0.006)QR 52.576 0.016661000000000002 1720000.0 566.68 826.26 592.05 966.79 1002.7 870.43 612.52 984.63 1176.1 663.96 1196.6 True False 662.3217300041767 868.3131047581962 676.0115925891292 1203.6535934008518 855.2041582686577 962.538324855328 723.8069554126973 1124.2043178029091 909.7152278457736 513.9709748597531 899.451195520069 0.7363620542204268 0.9653810113133837 0.7515822936877132 1.338208898265893 0.9508066280062841 1.0701395802790408 0.8047206552370939 1.249878062759021 1.0114114388605264 0.5714273074733883 1.0 9.812901192328338 NLSELQDTS(ph)LQQLVSQR ddPTM_A549_MK2206_60min_R1 1 NLSELQDTSLQQLVSQR 17 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 NLSELQDT(0.205)S(0.794)LQQLVSQR 94.01 3.8129000000000004e-06 1472000.0 1565.9 1693.1 1880.5 1765.8 2643.5 2220.7 2168.5 1995.1 2518.5 2522.3 2590.4 True False 1830.1856374206611 1779.2715581851974 2147.183176866578 2198.4210792697754 2254.6446518232756 2455.6930000186435 2562.488380481346 2277.9115347375005 1948.0637712180774 1952.51067818657 1947.1321885970137 0.9399390797084931 0.9137908399877224 1.1027413492731117 1.1290558967410556 1.157930963818043 1.2611845330275537 1.3160320575500943 1.1698802721652024 1.0004784383035314 1.0027622621725707 1.0 10.927135114975949 -3.962846061746923 16.041442051788255 1.0592778349814034 1.0681211509923845 0.0 0.12827027020481546 0.0 0.0 0.019138505386839134 0.0 0.00010893161394729901 3.962846061746923 0.008843316010981095 NLSELQDTS(ph)LQQLVSQR ddPTM_A549_PD325901_60min_R1 1 NLSELQDTSLQQLVSQR 17 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 NLSELQDT(0.203)S(0.797)LQQLVSQR 131.11 4.3683e-12 1981600.0 1147.6 1643.8 1723.6 1799.8 1984.0 1875.5 1843.8 2140.7 2229.6 1701.2 1966.8 True False 1264.1035071815315 1782.3287949166013 1840.5738608487848 1910.9695583576286 1844.6506844284304 1860.226549820043 1913.966817966074 2098.0020591533375 2135.8976656428545 1593.7859416713911 1724.8960685724394 0.7328577821084202 1.0332963402204831 1.0670636303160472 1.107875189221799 1.069427148706474 1.0784571799503293 1.1096128357171766 1.216306360353461 1.2382761515657976 0.9239895496952707 1.0 10.752293721409528 -4.7687500692552725 1.2299419395787075 1.1163982800816943 3.5988002650045746e-15 0.5784783063218356 0.08547519683313964 2.2232697893178868 1.2197699867014302 0.013167963082558605 4.241176022620267 1.7031383600789246e-05 4.7687500692552725 -1.1163982800816907 NLSES(ph)PVITK ddPTM_A549_MK2206_60min_R1 2 NLSESPVITK 10 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 NLS(0.035)ES(0.95)PVIT(0.014)K;NLS(0.001)ES(0.999)PVITK 157.22 1.3733999999999999e-08 25369000.0 8708.7 11697.7 12300.2 11239.9 19449.2 14265.1 13904.3 14389.1 20526.8 18885.7 17843.800000000003 True False 10178.515652727072 12293.062965083569 14044.55331672125 13993.676004578288 16588.248444199442 15774.62341359298 16430.531329825582 16428.79898977061 15877.512574563923 14619.407253311705 13412.691996173335 0.7588719442473607 0.9165246595232934 1.0471092097491084 1.0433159882125609 1.2367575762518144 1.1760967461337 1.2249987798506998 1.2248696230747547 1.1837677760060252 1.0899681628030113 1.0 13.71131120215806 -5.505682189843746 1.2785513281982832 1.123649732116773 0.6857098679756687 0.7284086439154619 0.0745861058482901 0.5115053482318156 0.959316198932166 0.0144631877702003 0.2591818369760499 3.1211727757850165e-06 5.505682189843746 -0.4379398641411044 NLSES(ph)PVITK ddPTM_A549_PD325901_60min_R1 2 NLSESPVITK 10 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 NLS(0.001)ES(0.885)PVIT(0.114)K;NLS(0.001)ES(0.986)PVIT(0.013)K 139.61 1.6272000000000002e-07 55176000.0 16264.8 15946.400000000001 16779.0 17210.2 18260.1 19357.1 17915.3 18340.9 21175.0 17803.1 19738.7 True False 17915.990522487085 17290.25909189567 17917.7238403236 18273.23496679991 16977.573569925204 19199.462195426044 18597.07654512833 17975.0763613423 20285.088388046053 16679.009227703948 17310.965033928613 1.0349504194233339 0.9988038828573473 1.0350505477427614 1.055587307292534 0.9807410237759722 1.1090925409297558 1.0742946166593834 1.0383636224850588 1.1718057513424762 0.9634939008318679 1.0 14.079398532379681 -7.269544137576822 24.93938519346695 1.0806336270068853 1.022491181878825 0.03726445223002284 0.05631501475965254 817.1772949431875 2514556.517335661 0.009474500204708842 0.015311769782666578 5.375957942022385e-08 7.269544137576822 -0.05814244512806033 NLSFDIPTGSLRDS(ph)R ddPTM_A549_MK2206_60min_R1 1 NLSFDIPTGSLRDSR 15 1 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 NLSFDIPT(0.043)GS(0.043)LRDS(0.914)R 46.663000000000004 0.008454799999999998 3927900.0 339.42 382.33 226.04 342.77 466.59 344.47 321.33 363.13 538.88 395.38 449.87 True False 396.70579797772587 401.78896393653474 258.09587093800667 426.74866538753 397.95522908803525 380.9215867593199 379.7115016371091 414.6047895389844 416.8245404145317 306.06338339666434 338.1548632196335 1.1731482853761686 1.1881803505974435 0.7632475501923269 1.2619918025852976 1.1768431342345091 1.126470822073936 1.12289232815346 1.2260796298815795 1.2326439325635303 0.9050982750405527 1.0 8.401540291997469 NLSFDIPTGSLRDS(ph)R ddPTM_A549_PD325901_60min_R1 2 NLSFDIPTGSLRDSR 15 1 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 NLSFDIPT(0.084)GS(0.248)LRDS(0.668)R;NLSFDIPT(0.009)GS(0.247)LRDS(0.745)R 87.676 1.0852e-05 16012800.0 1171.46 1618.59 1331.72 987.8000000000001 1710.76 1370.69 1319.35 1540.99 1642.06 1549.99 1572.1100000000001 True False 1290.3857568167277 1754.9942597420995 1422.09852748291 1048.8141625434314 1590.6021194016032 1359.5275550908216 1369.5585862260225 1510.2537455667318 1573.0499286174693 1452.123366877051 1378.750436426387 0.9359095908330636 1.2728875461253937 1.0314401286202872 0.7606990611454495 1.1536548438195378 0.9860577514046779 0.9933332023276169 1.0953786165110424 1.1409243377610028 1.0532169771353552 1.0 10.429145627146077 -8.265341185444996 24.544311738050826 1.070569347184188 1.0233340663526285 0.040183485074687386 0.12398034190645266 909.9490501030016 5724047.960931348 0.020567780645788937 0.025362843000030937 5.4282371700167155e-09 8.265341185444996 -0.04723528083155948 NLSLCFEGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 NLSLCFEGSPR 11 0 Q96JQ2 Q96JQ2 CLMN Calmin 1 NLS(0.001)LCFEGS(0.999)PR 75.08800000000001 0.0012783 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NLSLSSSTPPLPS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 NLSLSSSTPPLPSPGR 16 0 O43516-2;O43516;O43516-3;E9PB87 O43516-2 WIPF1 WAS/WASL-interacting protein family member 1 1 NLSLSS(0.001)S(0.001)T(0.001)PPLPS(0.997)PGR;NLSLSSSTPPLPS(1)PGR 109.35 5.6082e-07 3513400.0 2824.2 3198.1 3641.5 3368.0 4418.1 3928.9 3655.1 3701.7 5304.7 4841.4 4866.1 True False 3300.8559149392872 3360.8696298104574 4157.919456825126 4193.160151195263 3768.203342621681 4344.653590207254 4319.184357619264 4226.427310980806 4103.193919865214 3747.724377501669 3657.713072472177 0.9024370828268121 0.9188445247671959 1.136753860798291 1.1463884859511924 1.0302074733474995 1.1878060154321473 1.1808428578297454 1.1554835568674737 1.1217921795850285 1.0246086292844876 1.0 11.836726192674613 -5.750132348996551 24.263211580227644 1.0900905708395383 0.9106405907018043 0.5790522172660777 0.0636304863663967 102.2379749163791 219381.0882506431 0.01043847978063685 0.03965602702007937 1.7777375711540803e-06 5.750132348996551 -0.17944998013773406 NLSLSSSTPPLPS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 NLSLSSSTPPLPSPGR 16 0 O43516-2;O43516;O43516-3;E9PB87 O43516-2 WIPF1 WAS/WASL-interacting protein family member 1 1 NLSLSSSTPPLPS(1)PGR 86.488 2.6805e-05 2448000.0 1102.9 1125.1 1249.8 1169.7 1337.2 1723.1 1236.6 1495.8 1561.5 1026.2 2095.2 True False 1214.8655960879323 1219.916125538794 1334.6189436579323 1241.9497124185573 1243.2796850895654 1709.0676448919835 1283.6594896934846 1465.9650955676013 1495.8755852625216 961.405556867612 1837.5036825671007 0.6611500197870045 0.6638986017347728 0.7263217790091125 0.6758896453929717 0.6766134385932934 0.930102976721285 0.6985887984181544 0.7978025347516919 0.8140803196501328 0.5232128599189918 1.0 10.843531425939508 -14.999999999999998 0.08320906674406123 1.927797866671236 0.475448107543619 0.0 0.15624795332046262 48.4090973868832 0.2966168359029641 8.084091046069052 0.7635662810940882 1.000000000000004e-15 14.999999999999998 -1.452349759127617 NLSPPNCT(ph)ELQIDSCSSSEEIKK ddPTM_A549_MK2206_60min_R1 1 NLSPPNCTELQIDSCSSSEEIKK 23 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2;A0A0U1RRA9;A0A0A0MSN1 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NLS(0.4)PPNCT(0.6)ELQIDSCSSSEEIKK 54.672 0.003565 2501800.0 1067.2 937.84 987.16 890.3 1688.9 1097.4 991.8 1165.5 1346.0 1554.1 2036.8 True False 1247.317269465056 985.572050161483 1127.1541318136735 1108.423539967086 1440.465047272302 1213.5261396048354 1171.9972219328572 1330.713194194054 1041.1331491203225 1203.0277306306737 1531.00634717974 0.814704179223511 0.6437413221551961 0.7362178046420246 0.7239836346915923 0.9408615776974251 0.7926329906079531 0.7655077486071746 0.8691754914310805 0.6800318960389611 0.7857757956697996 1.0 10.58026454857474 -10.93838521897126 1.129239661451414 1.003396219802022 0.767262906639588 0.033902168977930414 0.10038633508240054 0.32839103421417776 0.726210020711912 0.062209988162074806 0.013733833949569726 1.1524305990193457e-11 10.93838521897126 -0.23613331316243413 NLSPS(ph)FSR ddPTM_A549_MK2206_60min_R1 1 NLSPSFSR 8 0 Q1ED39;H3BNU8 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 NLS(0.176)PS(0.824)FSR 105.98 0.0019422 22408000.0 2246.0 3022.2 2784.0 2739.2 3867.1 2963.9 3331.2 3159.9 4254.8 3592.4 4305.7 True False 2625.0698905720715 3176.0170711401015 3178.8130626942616 3410.304122967361 3298.254712716394 3277.5379307224116 3936.4359202487726 3607.825501787894 3291.0945935194277 2780.8743449698427 3236.475858725357 0.8110889761451583 0.9813195617009588 0.9821834617194379 1.0537091181364362 1.019088309843092 1.0126872789384027 1.2162722949520426 1.1147388886159615 1.0168759901751845 0.8592291326606877 1.0 11.660208027334598 -4.5442879103890785 1.0784146915396557 1.0338649741840675 0.11910988859155607 0.37739860701868166 0.08220507453989588 4.661402989087448 1.4115384233801225 0.010275422959559785 7.103923613932673 2.855696765327717e-05 4.5442879103890785 -0.9147550855925115 NLSPS(ph)NSCEPKEESQSAPVQK ddPTM_A549_PD325901_60min_R1 2 NLSPSNSCEPKEESQSAPVQK 21 1 A0A0G2JNU3;A6H8Y1-2;A6H8Y1-7;A6H8Y1-6;A6H8Y1 A0A0G2JNU3 BDP1 Transcription factor TFIIIB component B homolog 1 NLS(0.35)PS(0.531)NS(0.109)CEPKEES(0.007)QS(0.002)APVQK;NLS(0.295)PS(0.349)NS(0.349)CEPKEES(0.006)QS(0.002)APVQK 47.38 0.0043271 10195100.0 2890.2 3249.1000000000004 3869.0 3658.0 3710.5 3456.5 3980.9 4319.0 3947.8999999999996 3814.3 3623.2 True False 3183.610976347215 3522.913059717442 4131.573606187021 3883.9463520792337 3449.8872805300875 3428.351409998922 4132.395327932068 4232.854156810044 3781.983492192067 3573.464447047492 3177.5693693571607 1.0019013296919075 1.1086817155561095 1.3002308135362157 1.2223010422790477 1.0857000680454123 1.0789226013632225 1.300489414261969 1.332104405848541 1.1902127231787807 1.1245905381352612 1.0 11.633707905639024 -10.532201738637088 0.9817684311124384 1.0064847898048865 1.18296145890711 0.12067702706533479 0.10593002876094755 0.5167242954838024 0.9355391972971008 0.05824613553394023 0.019019011911628046 2.9362853707262276e-11 10.532201738637088 0.17647666910222348 NLT(ph)SSSLNDISDKPEKDQLK ddPTM_A549_PD325901_60min_R1 1 NLTSSSLNDISDKPEKDQLK 20 2 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2;Q9Y6R1-5;Q9Y6R1-3 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 NLT(0.317)S(0.258)S(0.211)S(0.211)LNDIS(0.002)DKPEKDQLK 58.903999999999996 0.0070148 3291700.0 801.27 858.12 1169.1 1062.1 1169.7 1144.9 1108.4 1103.2 1070.9 1025.9 1335.1 True False 882.6143405362029 930.4367839724022 1248.4421563694098 1127.7035047958882 1087.5443072459352 1135.576313990385 1150.5807685397529 1081.195810556342 1025.8937971550658 961.124498918811 1170.8911638962081 0.7537970801652073 0.7946398543792234 1.0662324517123745 0.9631155649372137 0.9288175884999154 0.9698393403291977 0.9826538998818035 0.9233956527253996 0.8761649492181194 0.8208487078513886 1.0 10.193391266048199 -5.62112274503005 7.39882035773929 0.9505558195772674 0.7641414613475936 0.548437947061849 0.061148038137866956 0.1013360808421947 6.475242257778195 0.007708892402642262 0.03026845268784781 2.392639427055857e-06 5.62112274503005 -0.18641435822967378 NLTMS(ph)PLHK ddPTM_A549_MK2206_60min_R1 4 NLTMSPLHK 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 NLT(0.029)MS(0.971)PLHK;NLT(0.153)MS(0.847)PLHK;NLT(0.003)MS(0.997)PLHK;NLT(0.002)MS(0.998)PLHK 93.345 0.00030101 27851500.0 6545.4 8508.6 8142.0 7993.6 12123.0 8763.8 8612.4 8552.5 12832.8 10503.2 11311.8 True False 7650.103500334123 8941.65139683101 9296.658030336448 9952.032358846343 10339.722759240998 9691.179499060381 10177.161599288698 9764.843065932764 9926.191289770639 8130.519825210798 8502.76787020217 0.8997191993378771 1.0516165480851125 1.0933684386370768 1.1704462018448252 1.2160419897474106 1.1397676200267661 1.1969233730294364 1.1484311009069788 1.1674070657105478 0.9562203683936957 1.0 13.053716836806588 -5.2723112363109506 2.0027884593401937 1.1131157567959977 0.8403939054533849 0.4184626373337693 0.07595827801101236 0.6134158826413794 2.6426939022930753 0.011610569539462693 0.30275495380054823 5.341814021090259e-06 5.2723112363109506 -0.27272185134261284 NLTMS(ph)PLHK ddPTM_A549_PD325901_60min_R1 7 NLTMSPLHK 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 NLT(0.103)MS(0.897)PLHK;NLT(0.199)MS(0.801)PLHK;NLT(0.154)MS(0.846)PLHK;NLT(0.333)MS(0.667)PLHK;NLT(0.006)MS(0.994)PLHK;NLT(0.003)MS(0.997)PLHK;NLT(0.032)MS(0.968)PLHK 100.93 0.00023197 71808100.0 14068.83 13568.83 15564.4 16707.9 19331.399999999998 20964.6 17860.3 18864.2 20273.3 17513.9 19535.0 True False 15497.087264674754 14712.322923913027 16620.69378034047 17739.909036605986 17973.62915370955 20793.871248390977 18539.98349003117 18487.938732321396 19421.283703299832 16408.069365059135 17132.31884256792 0.9045528166432336 0.8587467382032353 0.9701368468023 1.0354645625978205 1.0491066223359833 1.213721939188136 1.0821642802937854 1.0791264686473865 1.133605081820251 0.9577261266169486 1.0 14.06443281154731 -6.134040130880973 1.8060705956647558 1.0773291862875298 0.8786642320977703 0.5698861240289775 0.06395291050824108 0.19734040038402534 1.2105911118389228 0.00942265345031114 0.03704352625469174 7.344459987090949e-07 6.134040130880973 -0.1986649541897595 NLTSS(ph)SLNDISDKPEKDQLK ddPTM_A549_MK2206_60min_R1 2 NLTSSSLNDISDKPEKDQLK 20 2 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2;Q9Y6R1-5;Q9Y6R1-3 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 NLT(0.084)S(0.084)S(0.505)S(0.326)LNDISDKPEKDQLK;NLT(0.053)S(0.053)S(0.519)S(0.375)LNDISDKPEKDQLK 170.55 5.0051e-35 44943000.0 6816.0 9087.5 10527.0 10060.099999999999 14931.0 10787.1 10912.099999999999 10192.6 15581.4 13495.5 14486.5 True False 7966.374164799299 9550.014934149189 12019.886893312678 12524.82495161504 12734.669678976103 11928.583762102535 12894.687321489737 11637.432263528364 12052.237778382903 10446.857176968188 10889.102242939563 0.7315914560325352 0.877025003630705 1.1038455352098755 1.1502164891266469 1.1694875660877548 1.095460718062131 1.184182775935508 1.0687228390268826 1.1068164766473298 0.9593864529779648 1.0 13.41059739484864 -5.5799006069048405 3.0968865253236046 1.0818533774179537 0.7465463772740962 0.7528918758957629 0.06566029537065042 0.09803819476791215 1.7881386013724996 0.009656230534615626 0.0554881143739323 2.630870026702681e-06 5.5799006069048405 -0.3353070001438575 NLTSS(ph)SLNDISDKPEKDQLK ddPTM_A549_PD325901_60min_R1 2 NLTSSSLNDISDKPEKDQLK 20 2 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2;Q9Y6R1-5;Q9Y6R1-3 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 NLT(0.058)S(0.058)S(0.442)S(0.442)LNDISDKPEKDQLK;NLT(0.056)S(0.085)S(0.773)S(0.085)LNDISDKPEKDQLK 174.53 3.0768999999999997e-35 73508000.0 12753.900000000001 12649.0 16372.3 14998.3 18866.5 18179.3 17143.699999999997 18874.6 18699.4 15315.6 16168.0 True False 14048.666539075057 13714.975621669355 17483.422732637835 15924.710927389293 17541.38212589163 18031.253808127698 17796.11288489261 18498.131296162737 17913.529246915143 14348.570402223353 14179.43849739638 0.9907773528306261 0.9672439161951082 1.2330123464231768 1.1230847350064939 1.2370999126032083 1.2716479437065569 1.2550647113537197 1.304574317210047 1.2633454597094527 1.011927969140529 1.0 13.79151278285601 -5.751785218718552 24.690931454430093 1.170085696711789 0.9790105071157147 0.38682048557939586 0.09963597579535192 174.0156626002318 445041.05636888667 0.01677606798862347 0.06328973271388183 1.7709845860600939e-06 5.751785218718552 -0.19107518959607428 NLTSSS(ph)LNDISDKPEKDQLK ddPTM_A549_PD325901_60min_R1 1 NLTSSSLNDISDKPEKDQLK 20 2 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2;Q9Y6R1-5;Q9Y6R1-3 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 NLT(0.001)S(0.001)S(0.378)S(0.62)LNDISDKPEKDQLK 172.8 3.9173e-35 17005000.0 2320.8 3005.0 2672.4 4134.6 3668.8 4521.8 3627.4 5113.3 3877.6 5328.5 4008.6 True False 2556.4059075173404 3258.2418960484174 2853.7651344466776 4389.984851642101 3411.116144672897 4484.975959998012 3765.4426919894427 5011.311220193753 3714.6379567172307 4992.057600632503 3515.56761260905 0.727167328071988 0.9268039346938743 0.811750888878163 1.2487271858737228 0.9702888752412203 1.2757473199810039 1.07107673835775 1.4254629045449219 1.056625377760959 1.4199862300266466 1.0 11.779541925819014 -6.238640789655668 24.61923251354055 1.0845668174844716 0.8323969847343653 0.38235308875438034 0.1741996954591893 544.6900888383719 588186.697004167 0.020183058194619522 0.05335419232080724 5.772437114185293e-07 6.238640789655668 -0.2521698327501063 NLVS(ph)PAYCTQESR ddPTM_A549_MK2206_60min_R1 2 NLVSPAYCTQESR 13 0 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVS(0.972)PAYCT(0.027)QESR;NLVS(1)PAYCTQESR 98.508 0.00016007 14574200.0 6121.5 6961.6 7235.200000000001 5804.7 9298.3 6479.6 6107.200000000001 6466.2 10831.3 9489.6 10986.1 True False 7154.659543694093 7315.915704602254 8261.260154887035 7226.851760582882 7930.5323873835305 7165.2669711896215 7216.799187122746 7382.803651906978 8378.027844031913 7345.892769186568 8257.948169064877 0.8663967606985211 0.8859241490529604 1.0004010664337377 0.8751389101296871 0.960351436582288 0.8676812719691616 0.8739215891615326 0.8940239755395559 1.014541103008719 0.8895542353613985 1.0 13.011567648142545 -8.76238987832617 24.995766931280293 1.0068666375899706 0.9044978580209272 0.13051774683384587 0.0532950577882656 12.487040576176215 328377.5853261238 0.006630660812864487 0.007260361841714316 1.728264151431116e-09 8.76238987832617 -0.10236877956904344 NLVS(ph)PAYCTQESREEIPGGEAR ddPTM_A549_MK2206_60min_R1 1 NLVSPAYCTQESREEIPGGEAR 22 1 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVS(0.76)PAY(0.002)CT(0.189)QES(0.049)REEIPGGEAR 61.108999999999995 0.00040143 2802300.0 1245.1 1074.8 1214.0 1247.8 1693.7 1033.2 1148.0 1062.6 1668.2 1428.3 1770.1 True False 1455.2424402276429 1129.5027291580245 1386.163454781189 1553.5110560158714 1444.5589736308236 1142.5325382173469 1356.576740047307 1213.2268040760202 1290.3553635679962 1105.6460380025692 1330.5353177252832 1.0937270291446017 0.8489084912748133 1.04180883913026 1.1675834796116447 1.0856975793025008 0.8587013985999631 1.019572139104541 0.9118335965332987 0.9698016628179553 0.8309783462890783 1.0 10.3777910904231 NLVSPAYCT(ph)QESREEIPGGEAR ddPTM_A549_PD325901_60min_R1 1 NLVSPAYCTQESREEIPGGEAR 22 1 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVSPAYCT(0.566)QES(0.434)REEIPGGEAR 105.46 2.2043e-10 12162000.0 2800.6 4031.0 3333.4 3435.6 3808.0 3319.3 3618.8 3467.4 3418.6 2870.9 3788.6 True False 3084.914850307246 4370.70651679573 3559.624569362579 3647.8092091862845 3540.5392168868248 3292.268721310409 3756.515414283343 3398.2399868773205 3274.928130501735 2689.63088404914 3322.6262179141468 0.9284567832742471 1.3154373167919982 1.0713286225729037 1.0978692666418188 1.0655845661476415 0.99086340303942 1.1305862194278296 1.0227572299753422 0.9856444618551299 0.8094894543201481 1.0 11.698108289430694 -7.570817864708476 0.5868809405909468 0.9917372234473807 1.1226643356430006 0.2271467909070719 0.10663905624737641 0.8513946868920154 0.584176419706575 0.01939212182956435 0.045738137062085196 2.686470866985981e-08 7.570817864708476 0.13092711219561992 NLVSPAYCTQES(ph)REEIPGGEAR ddPTM_A549_MK2206_60min_R1 2 NLVSPAYCTQESREEIPGGEAR 22 1 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVSPAYCTQES(1)REEIPGGEAR;NLVSPAYCT(0.003)QES(0.997)REEIPGGEAR 171.98 1.0070000000000002e-40 14586700.0 8195.7 9690.0 8952.6 9168.5 12118.9 8948.6 8370.400000000001 8450.5 13446.6 13230.199999999999 15249.9 True False 9578.933794372899 10183.179610663621 10222.213299237297 11414.782911589606 10336.225863809754 9895.53491240006 9891.193331787441 9648.384253570865 10400.966569807826 10241.488631227041 11462.928954171408 0.8356445226756015 0.8883575612634256 0.8917627719848504 0.9957998481213406 0.9017089702931778 0.8632640882589641 0.8628853385842538 0.8417032236826153 0.9073568030815432 0.8934443083589139 1.0 13.484688101459351 -10.181029992167504 0.8258777763159735 0.9949735321180366 0.8890051555801738 0.04678502470977075 0.05074725507826336 0.3848407087148316 0.5139951721776015 0.021820878589043986 0.008705943700336765 6.591283745848036e-11 10.181029992167504 -0.10596837653786284 NLVSRT(ph)PEQHK ddPTM_A549_MK2206_60min_R1 2 NLVSRTPEQHK 11 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;A8MXE8;Q7Z5J4-4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 NLVS(0.008)RT(0.992)PEQHK;NLVS(0.017)RT(0.983)PEQHK 100.18 0.00015254 22210000.0 2780.9 4044.5 4193.5 3865.7 4517.7 3722.3 3369.8999999999996 3416.8 5349.6 6105.8 5852.0 True False 3250.2479335226517 4250.347774543757 4788.201357186918 4812.796673537864 3853.152314561003 4116.191315337232 3982.167209307858 3901.141863511145 4137.924141555778 4726.495539337734 4398.786893016418 0.7388964304414919 0.9662545328785249 1.08852769493988 1.0941190811445616 0.8759579421040667 0.9357560198863375 0.9052875954572858 0.8868676656522412 0.9406966607373525 1.074499777845931 1.0 12.102889993699232 -10.528143467974946 1.0351633934263675 0.9973185590109293 0.9433945052854308 0.11008234818627893 0.09614139182845868 1.4167775354783212 2.88896685444405 0.04937497529891226 0.01695948397649182 2.963852127472916e-11 10.528143467974946 -0.053924053725498466 NLVSRT(ph)PEQHK ddPTM_A549_PD325901_60min_R1 4 NLVSRTPEQHK 11 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;A8MXE8;Q7Z5J4-4 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 NLVS(0.089)RT(0.911)PEQHK;NLVS(0.062)RT(0.938)PEQHK;NLVS(0.055)RT(0.945)PEQHK;NLVS(0.007)RT(0.993)PEQHK 118.2 9.031200000000001e-06 60407900.0 10263.0 10443.3 9825.6 10963.900000000001 13262.9 13075.9 11778.5 12316.0 12544.9 12983.0 14109.9 True False 11304.892204778718 11323.39354176453 10492.424302132647 11641.115202176483 12331.359658521082 12969.414205700821 12226.737262942514 12070.347718284911 12017.681479064877 12163.251164307367 12374.471750025556 0.9135656400650292 0.9150607614212821 0.8479088654520528 0.9407363350401153 0.9965160459068174 1.0480782103425172 0.9880613500060932 0.9754232715638939 0.9711672321721578 0.9829309412163187 1.0 13.595079319296456 -6.554483029481964 4.203083322743858 0.990480989586841 0.8939297353411849 0.7571400209312058 0.025496405767834306 0.08141329456763843 3.239292732764347 0.0038328089656002756 0.008496300991931558 2.7894396545268275e-07 6.554483029481964 -0.09655125424565614 NLVTEDVMR ddPTM_A549_MK2206_60min_R1 2 NLVTEDVMR 9 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;K7ENA0;A0A0J9YXM3;A0A0J9YXH9;K7EIL4;A0A0J9YYI8 P06744-2 GPI Glucose-6-phosphate isomerase 0 ; 118.71 0.00044895 6268000.0 2007.19 2696.7 1963.69 2209.23 3276.8 2390.3999999999996 2124.8 2403.5 3455.4 3238.5 3001.6000000000004 False True 2345.9546009160076 2833.9505114630115 2242.170769785233 2750.491449176103 2794.7870607507134 2643.3505413808984 2510.848656143308 2744.203485410045 2672.757417139944 2506.920600764067 2256.2198800543533 1.0397721523752785 1.2560613158832465 0.9937731644006338 1.2190706559636564 1.2387033220731065 1.1715837471112165 1.1128563657912722 1.2162837096107564 1.1846174394472389 1.1111153761767554 1.0 11.13969195718876 -10.714854037150488 0.914548416812675 0.9974741081772381 1.1625315288968068 0.13828700433499996 0.08437133506136923 0.4830572301796116 0.7010990936456526 0.05360629068178379 0.0131302892218186 1.9281728475421278e-11 10.714854037150488 0.16505742071956864 NLVTEDVMR ddPTM_A549_PD325901_60min_R1 1 NLVTEDVMR 9 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;K7ENA0;A0A0J9YXM3;A0A0J9YXH9;K7EIL4;A0A0J9YYI8 P06744-2 GPI Glucose-6-phosphate isomerase 0 150.08 6.4477e-05 2384000.0 1324.4 1066.4 1187.4 1548.8 1676.3 1677.0 1222.6 1558.5 1631.9 1579.9 1800.1 False True 1458.85211302825 1156.2692705311258 1267.9841044162495 1644.4658584199901 1558.5624709210574 1663.3430680075783 1269.126712032391 1527.414494880402 1563.3169180851166 1480.1448443725792 1578.6991117740724 0.924084964733309 0.7324190290015185 0.8031828832736498 1.0416588228595454 0.9872447886346206 1.0536162689914905 0.803906648560917 0.9675146349857389 0.9902564120203564 0.9375724818830472 1.0 10.624520515191506 -6.251483606875828 24.626731604833385 0.9856914508054351 0.8111479452064856 0.4406607024971525 0.07548757921230746 325.603362268545 805413.9778070104 0.009748761079704642 0.025447045226446106 5.604235710287673e-07 6.251483606875828 -0.1745435055989495 NLVTFT(ph)PSKDSTK ddPTM_A549_MK2206_60min_R1 1 NLVTFTPSKDSTK 13 1 Q9H7D0;H0YB14;H0Y7N4 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NLVT(0.001)FT(0.967)PS(0.018)KDS(0.006)T(0.009)K 105.39 4.0985e-05 7905900.0 3622.6 5239.0 5488.8 4726.7 6082.7 5124.5 4672.7 4148.5 8175.5 6299.8 6177.9 True False 4234.006315933384 5505.642722421745 6267.194374467044 5884.741712189622 5187.942887703969 5666.771188632204 5521.669105591508 4736.562579248417 6323.762303590786 4876.670804598883 4643.756928633991 0.9117631221879782 1.1856009707298107 1.3495956982207085 1.2672372397236302 1.1171865727326205 1.2202988390047242 1.1890521382685213 1.01998503626281 1.3617771991030947 1.0501563452920446 1.0 12.18107674286211 -11.146299131638443 1.5309412025361495 1.0002652532105523 1.2082843597420734 0.1494317591306723 0.12843420147250437 0.45856500159176217 1.9304194801438812 0.095501579867595 0.020519301568888912 7.140043675612826e-12 11.146299131638443 0.20801910653152111 NLVTFT(ph)PSKDSTK ddPTM_A549_PD325901_60min_R1 2 NLVTFTPSKDSTK 13 1 Q9H7D0;H0YB14;H0Y7N4 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NLVT(0.003)FT(0.7)PS(0.125)KDS(0.069)T(0.103)K;NLVTFT(0.855)PS(0.141)KDS(0.002)T(0.002)K 117.26 6.1580999999999995e-06 33950000.0 13106.6 12156.3 14723.7 17692.9 20650.4 21212.9 19654.7 18087.3 18848.4 15690.1 14653.2 True False 14437.172383431038 13180.754063538552 15722.938822800692 18785.750249508685 19199.987144012535 21040.149175514583 20402.670363964517 17726.53461228764 18056.267295076606 14699.424408310782 12850.94929428801 1.123432366965145 1.0256638448800925 1.2234846206878447 1.4618180975827657 1.4940520505007786 1.6372447430686314 1.5876391616480112 1.3793949541273758 1.4050531895804972 1.1438395772711034 1.0 13.649587314188576 -10.61705290556257 0.8996579423168529 1.0004915969167636 1.3765693113324728 0.2766711472778386 0.18156546885432445 0.5580574966189824 0.8067723681623946 0.1350888742887416 0.0368510136240486 2.4151666019915893e-11 10.61705290556257 0.37607771441570925 NLVVIPK ddPTM_A549_MK2206_60min_R1 2 NLVVIPK 7 0 P15121 P15121 AKR1B1 Aldose reductase 0 ; 125.86 0.016486 5914200.0 3229.0 4140.3 3846.8 4118.5 5512.8 3730.6 3980.5 3585.6000000000004 6541.5 5196.3 5291.7 False True 3773.976258529481 4351.02358534887 4392.3340838980885 5127.5326848864925 4701.874422762 4125.369615828139 4703.705325573438 4093.8697804394687 5059.860694628968 4022.452221012918 3977.624846509736 0.9488014592027322 1.0938748004771697 1.1042605206351346 1.2890940907576467 1.182080916174831 1.0371439678249308 1.182541216701424 1.0292247103272534 1.2720809251452827 1.0112698849773418 1.0 11.957691498087996 -5.24628289024022 2.2117637356573714 1.134638339616768 0.8966178824465986 0.20545587646573338 0.09631836458191144 0.8716850870577727 4.651794521165585 0.015286184125629187 0.41109178050102674 5.671750392329669e-06 5.24628289024022 -0.2380204571701695 NLVVIPK ddPTM_A549_PD325901_60min_R1 2 NLVVIPK 7 0 P15121 P15121 AKR1B1 Aldose reductase 0 ; 125.86 0.016486 13194300.0 8742.6 7760.9 8351.6 8964.2 10535.9 12010.900000000001 10005.2 10857.8 11314.900000000001 8842.5 9290.3 False True 9630.14231603804 8414.938279880915 8918.389798250593 9517.898274824684 9795.894730881804 11913.087212601204 10385.953361055517 10641.232661220678 10839.374101624666 8284.183040929513 8147.6519960639225 1.181953073190939 1.0328053142115197 1.0945963085511028 1.1681768292782655 1.2022966537616158 1.4621497356976387 1.2747173499890403 1.3060489901092227 1.3303678295122443 1.0167571031422975 1.0 12.99216864563909 -3.6674163497086267 10.998037130525184 1.1861124484690557 1.1958510466304526 0.0 0.13981808784646063 0.0 0.0 0.02109809184037872 0.0 0.00021507188935301132 3.6674163497086267 0.009738598161396883 NLVYDQS(ph)PNR ddPTM_A549_MK2206_60min_R1 4 NLVYDQSPNR 10 0 I3L533;I3L2R9;Q9NXR1;Q9NXR1-1;I3L2T8 I3L533 NDE1 Nuclear distribution protein nudE homolog 1 1 NLVYDQS(1)PNR;NLVYDQS(1)PNR;NLVYDQS(1)PNR;NLVYDQS(1)PNR 134.3 7.777899999999999e-07 44845000.0 17859.5 21176.199999999997 18806.6 17901.2 29548.5 22332.3 20546.600000000002 22620.2 31566.3 27108.8 29125.5 True False 20873.74697714688 22253.978129136733 21473.658672724814 22286.994803615395 25201.954792661243 24695.48916301903 24279.651260501745 25826.68262145716 24416.58345102291 20984.903252120715 21892.83452709323 0.9534510915575966 1.016495972762073 0.9808532854048813 1.0180040769062761 1.1511508371139814 1.1280169834772837 1.109022736660926 1.1796865586087375 1.115277394565169 0.9585283817931883 1.0 14.418171135961359 -6.537180700877502 23.44544003023266 1.0808241951400295 0.9889795158880184 0.371860278823146 0.06216051062057527 107.7907997407726 176702.91883734742 0.00949048207926632 0.019765083542147923 2.902814602536051e-07 6.537180700877502 -0.09184467925201112 NLYPSS(ph)SPYTR ddPTM_A549_PD325901_60min_R1 1 NLYPSSSPYTR 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 NLYPS(0.188)S(0.545)S(0.267)PYTR 80.31 0.00088592 25651000.0 5314.6 6495.7 5898.6 6849.4 7332.1 8987.7 6012.9 6805.1 7956.2 8009.3 8056.0 True False 5854.134279598265 7043.1154356611305 6298.914467163286 7272.47188188396 6817.118590371827 8914.507151062437 6241.7241998851305 6669.366942002329 7621.828582430789 7503.591431124313 7065.163071191561 0.8285915301047605 0.9968793875939919 0.8915455175900072 1.0293423957244112 0.9648918958670404 1.2617553283959768 0.8834508329094298 0.943979194082143 1.0787901858216196 1.062054952662092 1.0 12.786507144483059 -3.903380865836039 0.6018326394114172 1.0316034613056233 1.1113180200201941e-10 0.24775095845985085 0.09722660992021608 14.756897855986738 1.046236735790555 0.01571369269480089 15.375289131467579 0.00012491630636972257 3.903380865836039 -1.0316034611944915 NLYPSSS(ph)PYTR ddPTM_A549_MK2206_60min_R1 2 NLYPSSSPYTR 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 NLYPS(0.022)S(0.065)S(0.912)PYT(0.002)R;NLYPS(0.006)S(0.207)S(0.787)PYTR 120.53 1.1898e-05 26325000.0 10781.3 13317.8 12818.5 11705.2 18595.6 13288.7 11505.1 12925.7 21044.2 20145.9 20984.6 True False 12600.919862522107 13995.619135076986 14636.356050339939 14572.97452546639 15860.211873442373 14694.901413674852 13595.427745573415 14757.957558296073 16277.72230068194 15594.927198064806 15773.54467450313 0.7988641819292935 0.8872843374070484 0.9279053220040401 0.9238871050349653 1.005494465621246 0.9316169394332885 0.86191328747745 0.9356145281758587 1.031963495624023 0.9886761358892877 1.0 13.945219282523851 -2.0000000000008007 0.21046198196258026 1.021597176659533 0.042253380663489 0.49973072897727777 0.046629188968829276 26.48076609573668 0.3015454185162119 0.03639034926652292 8.805197682589945 0.009999999999981564 2.0000000000008007 -0.979343795996044 NLYPSSS(ph)PYTR ddPTM_A549_PD325901_60min_R1 1 NLYPSSSPYTR 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 NLYPS(0.001)S(0.063)S(0.935)PYT(0.001)R 97.13799999999999 0.00027991 28650000.0 13545.0 15711.0 15800.0 19661.0 19709.0 19801.0 18478.0 18626.0 17355.0 20164.0 16373.0 True False 14920.078428698023 17035.021107759294 16872.28301311836 20875.415316629267 18324.707832358847 19639.747221000616 19181.19040154957 18254.48981818568 16625.62970363822 18890.841598790237 14359.22479699845 1.0390587681179566 1.1863468500973795 1.1750135018880143 1.4537982106800722 1.276162751918844 1.367744254906154 1.3358096048164851 1.2712726540781971 1.157836160285862 1.3155892372921862 1.0 13.809690244886307 -9.468341021070758 0.9469464472981921 1.0304632134216283 1.269174321221712 0.0 0.1361833506299004 0.3178619498189711 0.6019480005306737 0.03237736184022847 0.02330649611113098 3.401409958846875e-10 9.468341021070758 0.23871110780008364 NMAPGAVCS(ph)PGESK ddPTM_A549_MK2206_60min_R1 1 NMAPGAVCSPGESK 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NMAPGAVCS(0.999)PGES(0.001)K 69.714 0.00033949 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NMAPGAVCS(ph)PGESK ddPTM_A549_PD325901_60min_R1 3 NMAPGAVCSPGESK 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NMAPGAVCS(0.99)PGES(0.01)K;NMAPGAVCS(1)PGESK;NMAPGAVCS(0.997)PGES(0.003)K 82.55 0.00013181 8199600.0 3486.5 3551.1 4769.1 4113.0 4484.4 4576.299999999999 4071.3 4743.3 3764.0 3801.6 4922.8 True False 3840.446913374356 3850.3636595865355 5092.759804928027 4367.050668699262 4169.43121434015 4539.032130067429 4226.235549400845 4648.691160453132 3605.8121696625885 3561.566327214884 4317.326808200327 0.889542785151176 0.8918397496045836 1.179609520237116 1.0115172797214447 0.9657437112290727 1.0513524529683496 0.9789010045228768 1.0767522050041272 0.8351955573096093 0.8249471224763546 1.0 12.075922589118745 -8.754229310820225 24.997829460159696 0.9221756790750686 1.0071579859800248 0.23271191075373354 0.09008877461813096 242.43167454242655 840527.1907693249 0.01611503664600501 0.018090763990209913 1.7610459551029287e-09 8.754229310820225 0.08498230690495623 NMAPSQQS(ph)PVR ddPTM_A549_MK2206_60min_R1 6 NMAPSQQSPVR 11 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 NMAPS(0.446)QQS(0.554)PVR;NMAPS(0.28)QQS(0.72)PVR;NMAPS(0.001)QQS(0.999)PVR;NMAPS(0.079)QQS(0.921)PVR;NMAPS(0.008)QQS(0.992)PVR;NMAPSQQS(1)PVR 123.92 5.8334e-06 209115000.0 5586.43 7226.3 6924.91 6814.58 9777.64 7555.53 7478.719999999999 7579.84 11069.04 10105.01 10131.43 True False 6529.282808899617 7594.0878039771405 7906.966367091274 8484.152405918123 8339.362108361387 8355.05116964509 8837.506617880314 8654.305532286446 8561.920113624685 7822.281222765763 7615.516317756889 0.8573657433673234 0.9971862034186987 1.0382705567388542 1.114061352102399 1.095048813554076 1.097108957689953 1.160460597697643 1.1364043055239 1.1242730967119186 1.027150477575206 1.0 12.894726136714874 -5.268245507378826 1.4692668537774796 1.0806771676048672 0.7705683214555353 0.6949561678187528 0.045827319307144884 0.664998315097632 1.2883687829346528 0.00857553765656397 0.29909506571825917 5.392057224688032e-06 5.268245507378826 -0.3101088461493319 NMAPSQQS(ph)PVR ddPTM_A549_PD325901_60min_R1 6 NMAPSQQSPVR 11 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 NMAPS(0.304)QQS(0.696)PVR;NMAPS(0.001)QQS(0.999)PVR;NMAPSQQS(1)PVR;NMAPS(0.01)QQS(0.99)PVR;NMAPSQQS(1)PVR;NMAPSQQS(1)PVR 172.41 5.3152e-32 259774000.0 11737.27 12916.55 12609.330000000002 14640.79 15104.82 15182.0 14553.900000000001 16780.58 15124.330000000002 14676.05 14074.61 True False 12928.829009878504 14005.07299913616 13465.074959860991 15545.118346653408 14043.909552000121 15058.36282557606 15107.75662869966 16445.878167789648 14488.707006374329 13749.401698369635 12343.522196303818 1.0474181359474488 1.1346091315272946 1.0908616475687154 1.2593746014657214 1.1377554419763163 1.2199405150407703 1.2239421121812033 1.3323488957401681 1.1737903311514173 1.1138961375616756 1.0 13.59146650256844 -10.393002634275568 0.9561501193335368 1.0090764419154863 1.1814497229335739 0.21540500111230065 0.08175560706487077 0.38333033088288404 0.6733559550647239 0.039575227613259885 0.014594364583747377 4.045734376916952e-11 10.393002634275568 0.17237328101808758 NMGGPYGGGNYGPGGS(ph)GGSGGYGGR ddPTM_A549_MK2206_60min_R1 4 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 NMGGPYGGGNYGPGGS(0.642)GGS(0.358)GGYGGR;NMGGPY(0.004)GGGNY(0.001)GPGGS(0.588)GGS(0.407)GGYGGR;NMGGPYGGGNYGPGGS(0.875)GGS(0.125)GGYGGR;NMGGPYGGGNYGPGGS(0.525)GGS(0.475)GGYGGR 154.84 3.1568e-40 37213100.0 3111.81 3710.7999999999997 3798.8100000000004 3317.6800000000003 6043.3 4139.51 3586.6300000000006 4403.1900000000005 6769.0 5882.4 6030.0 True False 3637.0074515499005 3899.663869891698 4337.53838027787 4130.511748936315 5154.338575511101 4577.550200615651 4238.2742449093 5027.355666703832 5235.832307871816 4553.561754495771 4532.584580466338 0.8024135869905167 0.8603620739252655 0.9569679954723755 0.9112928122151764 1.1371742730900773 1.0099205253318597 0.9350678778669902 1.1091587101032299 1.1551538013071394 1.004628082202776 1.0 12.146118226348193 -5.746979967992987 0.6585092923577438 1.0697126900893172 0.7191662073294262 0.5648339421771089 0.07064060534640947 1.059829272548683 0.4498743782079727 0.01359638160848597 0.24462243452982582 1.7906884483526972e-06 5.746979967992987 -0.3505464827598911 NMGGPYGGGNYGPGGSGGS(ph)GGYGGR ddPTM_A549_PD325901_60min_R1 4 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 NMGGPYGGGNYGPGGS(0.285)GGS(0.715)GGYGGR;NMGGPYGGGNYGPGGS(0.318)GGS(0.682)GGYGGR;NMGGPYGGGNYGPGGS(0.295)GGS(0.705)GGYGGR;NMGGPYGGGNYGPGGS(0.292)GGS(0.708)GGYGGR 196.43 8.218199999999999e-68 48281000.0 3940.54 3719.44 3944.87 3881.96 4845.57 4133.57 4591.66 4846.16 4910.2 4198.969999999999 4956.419999999999 True False 4340.5807199277715 4032.890262175815 4212.592600630395 4121.73985262917 4505.233879509008 4099.907576400767 4766.3981339527645 4749.499537061023 4703.841369680458 3933.8463175992947 4346.811761335064 0.998566526054172 0.9277812069177728 0.9691223894490786 0.9482213813103408 1.0364455897499658 0.9431987860319803 1.0965273850480313 1.0926398008093818 1.082135971822193 0.9049957839423595 1.0 12.085741905728163 -7.752052479348279 24.999068896248016 1.0486042931648412 0.9705262793724367 0.22361708789290424 0.05764384339049289 151.1187926272778 402456.6962456647 0.0069444807817672415 0.010224559980489647 1.769895074521904e-08 7.752052479348279 -0.07807801379240442 NMGGPYGGGNYGPGGSGGSGGYGGR ddPTM_A549_PD325901_60min_R1 1 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 62.165 0.0020458 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NMPGLSAATLASLGGT(ph)SSR ddPTM_A549_PD325901_60min_R1 1 NMPGLSAATLASLGGTSSR 19 0 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-3;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLSAATLAS(0.005)LGGT(0.332)S(0.332)S(0.332)R 49.768 0.0079384 3784900.0 1614.7 1313.3 1684.2 1728.6 2249.5 1640.9 1789.8 1372.4 2322.3 1894.9 2198.0 True False 1778.6231553206856 1423.9764000267517 1798.4999399173375 1835.3716960645622 2091.5028803537066 1627.5370544386612 1857.911818416139 1345.0264053730273 2224.7018070157906 1775.2556906143432 1927.6599342699933 0.9226851291040875 0.7387072661060484 0.9329964834271618 0.9521242120745842 1.0849957729425759 0.8443071443797016 0.963817209345969 0.6977508747580989 1.1540945409846304 0.9209382106531327 1.0 10.912634847425506 -8.790049165760108 24.99932527507149 1.0727668655909648 0.8976365367712268 0.17575512085065448 0.11573801439537611 172.52454415283623 150751.75193821976 0.01928953100446667 0.02053701081850305 1.621626505312052e-09 8.790049165760108 -0.175130328819738 NMPGLSAATLASLGGTS(ph)SR ddPTM_A549_PD325901_60min_R1 2 NMPGLSAATLASLGGTSSR 19 0 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-3;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLS(0.001)AAT(0.013)LAS(0.038)LGGT(0.36)S(0.445)S(0.142)R;NMPGLSAATLASLGGT(0.312)S(0.588)S(0.099)R 119.18 4.4104e-14 11669500.0 6030.1 7025.0 6031.299999999999 6174.9 7063.4 6349.8 6737.3 6683.0 8200.9 6795.5 7381.1 True False 6642.271312875004 7617.02140423964 6440.62028715321 6556.309548784599 6567.291151407147 6298.08933406948 6993.6916382920235 6549.702322287921 7856.244692397965 6366.430970272712 6473.271492647973 1.0261073277119572 1.1766880800366064 0.9949559962791847 1.0128278346166906 1.0145242878915177 0.9729376160450777 1.0803952292492471 1.0118071410610159 1.2136436269235278 0.9834951272325585 1.0 12.660279297246122 NMPNKQPES(ph)SL ddPTM_A549_MK2206_60min_R1 1 NMPNKQPESSL 11 1 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 NMPNKQPES(0.5)S(0.5)L 52.247 0.014658000000000001 10420000.0 2665.4 2441.2 2537.3 2543.8 3313.0 2698.7 2390.9 2125.6 4373.7 4261.9 4723.0 True False 3115.2543572265363 2565.4466527917466 2897.1272930941604 3167.0311141955226 2825.662088704562 2984.274642747922 2825.2955816891167 2426.9103093769895 3383.0639333637123 3299.1338299819 3550.1487518312624 0.8774996697306287 0.7226307493364665 0.8160580008372168 0.892084060579682 0.7959278008413054 0.8406055214471091 0.7958245637543365 0.6836080623734777 0.9529358260322576 0.9292945340051224 1.0 11.793663759711311 -8.907117232960404 7.842959461014065 0.9793657953570318 0.8046438565045516 0.580773448769388 0.05945349179094495 0.10242442425810083 7.591284548004836 0.009862638591216284 0.010469273303960122 1.2384622323129447e-09 8.907117232960404 -0.17472193885248022 NMPNKQPESS(ph)L ddPTM_A549_MK2206_60min_R1 4 NMPNKQPESSL 11 1 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 NMPNKQPES(0.257)S(0.743)L;NMPNKQPES(0.15)S(0.85)L;NMPNKQPES(0.228)S(0.772)L;NMPNKQPES(0.158)S(0.842)L 84.507 0.00042555 46479000.0 6994.3 9305.4 8784.3 8109.6 10951.400000000001 8671.7 9338.300000000001 8254.5 12526.5 12314.5 12007.0 True False 8174.766845782832 9779.00511342304 10030.045828529159 10096.452364053783 9340.463567231855 9589.33353819141 11034.948233086903 9424.600653346044 9689.267750710052 9532.645897208311 9025.330523658253 0.9057581685628218 1.0835065915635076 1.1113217186049007 1.118679514017551 1.0349165100100808 1.0624911201927427 1.2226641677178254 1.044238837418882 1.073563757616567 1.0562101711643939 1.0 13.139764051688056 -10.393316874449667 0.8262646793225565 1.0016387060296403 1.0777753110044388 0.032192185791680705 0.07344127946752028 0.9434128263403605 1.199129655846644 0.0414420078300612 0.013438741903703024 4.0428080849808907e-11 10.393316874449667 0.07613660497479846 NMPNKQPESS(ph)L ddPTM_A549_PD325901_60min_R1 4 NMPNKQPESSL 11 1 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 NMPNKQPES(0.118)S(0.882)L;NMPNKQPES(0.236)S(0.764)L;NMPNKQPES(0.182)S(0.818)L;NMPNKQPES(0.08)S(0.92)L 169.65 4.0861e-15 113343000.0 18564.3 18209.8 18521.3 23174.8 24530.500000000004 24845.199999999997 23186.199999999997 22902.3 24126.5 23240.3 24150.6 True False 20448.934069684663 19744.403753298648 19778.266795624622 24606.254762210476 22807.562305630847 24642.86892859981 24068.56352897546 22445.49565999322 23112.54710716377 21772.90349178559 21180.22930326699 0.9654727423810502 0.9322091593339421 0.9338079636642026 1.1617558247310869 1.0768326432666546 1.163484520198217 1.1363693557964905 1.0597380858634549 1.0912321475008169 1.0279824254984427 1.0 14.370430587996573 -6.233444456784309 24.705122515295827 1.069163296894751 0.9426678390328647 0.590808176386272 0.05205642712579349 444.7981562149398 392527.3195006901 0.008657801157246903 0.022900669384400597 5.841919163606818e-07 6.233444456784309 -0.12649545786188643 NMS(ph)PDEIKIPPEPPGR ddPTM_A549_MK2206_60min_R1 2 NMSPDEIKIPPEPPGR 16 1 J3KS14;F5H478;J3KRU5;J3QLH3;Q9UHR5;X6R3T8;J3QQJ0;Q9UHR5-2 J3KS14 SAP30BP SAP30-binding protein 1 NMS(1)PDEIKIPPEPPGR;NMS(1)PDEIKIPPEPPGR 52.483000000000004 0.003961999999999999 4981200.0 4334.5 4990.3 4442.7 5270.7 7495.7 5019.1 5455.4 5891.3 8298.0 7860.0 8393.2 True False 5066.057631649438 5244.284954705329 5072.741664379235 6562.02173661071 6393.092459493749 5550.217830591062 6446.575564158606 6726.409816349575 6418.5162491830915 6084.420540992918 6308.936799464357 0.8029970488972972 0.8312470264642025 0.8040565035950149 1.0401153070938736 1.0133391192057173 0.8797390126118062 1.021816475433061 1.066171691071729 1.017368924939625 0.9644129802519973 1.0 12.623181183153672 -6.257193598446033 24.847528028427863 1.0063794966846658 0.8146148619104724 0.7651032052290467 0.046204585155824505 110.00650479173753 643785.6451279791 0.006202275828906006 0.015794766101528756 5.531034934936045e-07 6.257193598446033 -0.19176463477419337 NMS(ph)PDEIKIPPEPPGR ddPTM_A549_PD325901_60min_R1 1 NMSPDEIKIPPEPPGR 16 1 J3KS14;F5H478;J3KRU5;J3QLH3;Q9UHR5;X6R3T8;J3QQJ0;Q9UHR5-2 J3KS14 SAP30BP SAP30-binding protein 1 NMS(1)PDEIKIPPEPPGR 47.498999999999995 0.0059584 5136600.0 2082.2 2608.4 1996.7 2270.4 2473.7 2460.7 2418.4 2274.2 2653.9 2568.4 2539.9 True False 2293.583411165375 2828.2190221805954 2132.208069132496 2410.637451547484 2299.955845801718 2440.6608750424834 2510.43353539926 2228.8392969246133 2542.3658121858525 2406.230785674115 2227.5084017526638 1.0296631920044483 1.2696782736959717 0.957216622597166 1.0822125068757225 1.0325239823975751 1.0956909851034031 1.1270141712704578 1.0005974815497451 1.1413495949938732 1.0802342131597922 1.0 11.121215158000325 -11.069477322710906 1.3791532464471503 0.99992278260462 1.088903308417223 0.0 0.08234626180221229 0.6482411680185067 2.1973895510007804 0.05323996648493415 0.01171833090300194 8.52163007091579e-12 11.069477322710906 0.08898052581260307 NMTVEQLLTGS(ph)PTSPTVEPEKPTR ddPTM_A549_MK2206_60min_R1 5 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLT(0.042)GS(0.692)PT(0.21)S(0.052)PT(0.003)VEPEKPTR;NMTVEQLLT(0.014)GS(0.924)PT(0.049)S(0.012)PT(0.002)VEPEKPTR;NMTVEQLLT(0.016)GS(0.851)PT(0.117)S(0.014)PT(0.002)VEPEKPTR;NMTVEQLLT(0.073)GS(0.766)PT(0.133)S(0.024)PT(0.004)VEPEKPTR;NMTVEQLLT(0.084)GS(0.796)PT(0.117)S(0.002)PTVEPEKPTR 92.12100000000001 5.8093e-08 36359300.0 3586.5199999999995 5164.419999999999 4585.049999999999 4371.26 6366.889999999999 4993.18 4715.39 4349.11 7524.83 6348.83 7197.589999999999 True False 4191.836894004697 5427.266918978677 5235.279034880141 5442.218896233316 5430.328915168182 5521.5549933953625 5572.115326003199 4965.609661090775 5820.468019684307 4914.624893546065 5410.229759621671 0.774798313611329 1.0031490639240794 0.9676629768947623 1.0059127131439758 1.0037150280929874 1.0205768033373643 1.0299221241193364 0.9178186290997764 1.0758264026279216 0.9083948578719395 1.0 12.401474147850637 -4.620051433954424 1.3300564071987757 1.0214336695425579 5.117793141589622e-18 0.5356584324714697 0.05289117575129682 2.549252812746518 1.1455512084321118 0.006384693319375138 5.368101968232018 2.3985488395242226e-05 4.620051433954424 -1.0214336695425579 NMTVEQLLTGS(ph)PTSPTVEPEKPTR ddPTM_A549_PD325901_60min_R1 8 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLT(0.049)GS(0.832)PT(0.096)S(0.019)PT(0.004)VEPEKPTR;NMTVEQLLT(0.001)GS(0.951)PT(0.039)S(0.008)PT(0.001)VEPEKPTR;NMTVEQLLT(0.012)GS(0.806)PT(0.151)S(0.025)PT(0.006)VEPEKPTR;NMTVEQLLT(0.064)GS(0.774)PT(0.064)S(0.075)PT(0.023)VEPEKPT(0.001)R;NMTVEQLLT(0.005)GS(0.964)PT(0.027)S(0.004)PT(0.001)VEPEKPTR;NMTVEQLLT(0.027)GS(0.763)PT(0.172)S(0.032)PT(0.006)VEPEKPTR;NMTVEQLLT(0.017)GS(0.794)PT(0.164)S(0.021)PT(0.004)VEPEKPTR;NMTVEQLLT(0.003)GS(0.941)PT(0.049)S(0.007)PTVEPEKPTR 154.63 6.404899999999999e-34 82787000.0 10354.34 11547.93 11617.45 11327.900000000001 15185.2 14094.9 12208.1 12650.879999999997 13632.199999999999 13698.199999999999 12812.67 True False 11405.504974337771 12521.114588563862 12405.880018402022 12027.598655472497 14118.643938096076 13980.115807549208 12672.685926028651 12398.548273976634 13059.28604125248 12833.29331425056 11236.792816207051 1.015014262600569 1.114296115747939 1.1040410036312829 1.0703764723796323 1.2564656276061683 1.244137543177392 1.1277849590454834 1.103388527026498 1.1621898040530578 1.1420779509025782 1.0 13.455942702616872 -10.78886034809294 0.8997336865138235 0.9949526596996117 1.13725687905268 0.0 0.07822742540107164 0.5871775175887692 0.7937946687758815 0.05738163139845209 0.012500985794278576 1.6260715519083974e-11 10.78886034809294 0.14230421935306836 NMTVEQLLTGSPT(ph)SPTVEPEKPTR ddPTM_A549_MK2206_60min_R1 1 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMT(0.001)VEQLLT(0.078)GS(0.369)PT(0.44)S(0.091)PT(0.02)VEPEKPT(0.001)R 49.638000000000005 0.0025923 2585500.0 611.76 846.87 1107.8 719.77 1474.5 1049.9 1097.8 1218.9 1683.4 1294.2 1328.3 True False 715.0101319039941 889.9720657257686 1264.902697863758 896.1136823117031 1257.6030032583387 1160.9997211327843 1297.2560498466319 1391.6828077246942 1302.1125878374082 1001.8393211390633 998.4464507849807 0.7161226637060522 0.8913568324330972 1.2668708440690923 0.8975080051686063 1.2595597913835124 1.1628061977885784 1.2992745367833463 1.393848219532004 1.3041386313844718 1.0033981495466433 1.0 9.963541244125384 -5.588602217558873 3.8703396260080183 1.1719422072595602 0.7446365489907532 0.503456808360036 0.14648970108017023 0.1390397452178817 4.027316003653168 0.02206681957848269 0.10611298415442143 2.5786819624778625e-06 5.588602217558873 -0.42730565826880706 NMTVEQLLTGSPTS(ph)PTVEPEKPTR ddPTM_A549_MK2206_60min_R1 6 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLTGS(0.002)PT(0.131)S(0.736)PT(0.131)VEPEKPTR;NMTVEQLLT(0.008)GS(0.037)PT(0.245)S(0.574)PT(0.133)VEPEKPT(0.002)R;NMTVEQLLTGS(0.001)PT(0.208)S(0.731)PT(0.06)VEPEKPTR;NMTVEQLLT(0.215)GS(0.176)PT(0.145)S(0.443)PT(0.021)VEPEKPTR;NMTVEQLLT(0.007)GS(0.245)PT(0.205)S(0.459)PT(0.084)VEPEKPTR;NMTVEQLLT(0.001)GS(0.053)PT(0.121)S(0.704)PT(0.121)VEPEKPTR 112.62 2.4606e-12 143328700.0 4693.3 5643.91 6212.4400000000005 4491.950000000001 7349.640000000001 5874.86 5436.26 5315.2 8375.07 7057.67 7276.410000000001 True False 5485.4142998316565 5931.160911911296 7093.457407760181 5592.477951651297 6268.517692009237 6496.533785783547 6423.958073910778 6068.645877117315 6478.130017238588 5463.337445235305 5469.476578300341 1.0029139390768298 1.0844110632894282 1.2969170461215316 1.0224886918501404 1.1460909654278473 1.187779798081221 1.1745105737169177 1.1095478315409786 1.184414984596513 0.9988775647948849 1.0 12.417187060271859 -10.885859501363615 1.083540352320424 0.9983729435317121 1.1402677703988742 0.3040928203714789 0.0780202376485315 0.5073484575929249 1.0374993446429428 0.05548056145958209 0.012707742023756515 1.3005902640233406e-11 10.885859501363615 0.14189482686716204 NMTVEQLLTGSPTS(ph)PTVEPEKPTR ddPTM_A549_PD325901_60min_R1 8 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLTGSPT(0.035)S(0.957)PT(0.008)VEPEKPTR;NMTVEQLLTGS(0.001)PT(0.042)S(0.936)PT(0.021)VEPEKPTR;NMTVEQLLTGS(0.001)PT(0.163)S(0.802)PT(0.034)VEPEKPTR;NMTVEQLLT(0.039)GS(0.233)PT(0.184)S(0.459)PT(0.085)VEPEKPTR;NMTVEQLLT(0.002)GS(0.007)PT(0.042)S(0.898)PT(0.052)VEPEKPTR;NMTVEQLLTGS(0.002)PT(0.021)S(0.831)PT(0.145)VEPEKPTR;NMTVEQLLT(0.009)GS(0.045)PT(0.2)S(0.576)PT(0.169)VEPEKPTR;NMTVEQLLTGS(0.045)PT(0.162)S(0.657)PT(0.123)VEPEKPT(0.013)R 119.89 1.4173000000000001e-16 230253200.0 13859.67 12939.76 14122.089999999998 15442.88 18822.469999999998 15539.319999999998 16010.220000000001 17370.4 17486.38 17254.030000000002 17127.48 True False 15266.693495450212 14030.23898729167 15080.499950425869 16396.751624274846 17500.444641196365 15412.77292996513 16619.497683228543 17023.933745184808 16751.488259124482 16164.607601208825 15020.90854004122 1.0163628554660193 0.9340472948018608 1.003967230758765 1.0915951974919522 1.165072312007323 1.0260879286282396 1.106424264479473 1.133349137956877 1.1152113878112004 1.0761404716711274 1.0 13.874684456487577 -6.108006398549137 4.482218185816441 1.072564028947263 0.9738276759374079 0.4536490979704493 0.049098034694829804 0.20107036170435647 6.573622862879482 0.008388771353018966 0.02356800188198001 7.798186212119013e-07 6.108006398549137 -0.09873635300985517 NNASTDYDLSDK ddPTM_A549_PD325901_60min_R1 1 NNASTDYDLSDK 12 0 P39023;G5E9G0;B5MCW2 P39023 RPL3 60S ribosomal protein L3 0 145.31 2.1336e-11 7470600.0 5613.0 5599.5 5501.4 6463.9 6440.3 6362.6 5276.2 6446.6 6560.0 6091.3 6689.7 False True 6182.827627927793 6071.389516446962 5874.758086605651 6863.160422417984 5987.955545828843 6310.785095113306 5476.988678247426 6318.017505740135 6284.3060130145 5706.694278452238 5866.9093095022645 1.0538474862588818 1.0348531392182105 1.0013378044025114 1.1698085074030637 1.0206320278601422 1.0756575161119541 0.9335390048345713 1.0768902623920296 1.0711442228766355 0.9726917491650099 1.0 12.518384975709616 NNCPDKTSAAAGSS(ph)SR ddPTM_A549_MK2206_60min_R1 1 NNCPDKTSAAAGSSSR 16 1 A0A087X2H1;Q9ULT8;H0YJP0 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 NNCPDKTSAAAGS(0.104)S(0.448)S(0.448)R 58.36600000000001 0.0019671 9942700.0 1156.8 1488.1 1597.8 1377.7 1631.7 1055.0 967.9 1080.7 1679.1 1465.9 1408.5 True False 1352.0395589553748 1563.8379338109937 1824.3920659385378 1715.236561847303 1391.6790914999206 1166.6393997476778 1143.7549012994675 1233.8925345049458 1298.7865309717197 1134.7521718882351 1058.730577377584 1.2770383588091887 1.47708771922365 1.7231882264678273 1.6200878660705609 1.3144789819398919 1.1019228353991417 1.0803078004344449 1.1654452614009014 1.2267394167350307 1.0718044761670644 1.0 10.048119787935676 -7.014665633312265 3.36737688007631 1.112628373175927 1.5336371821951984 0.7396430676470923 0.1152687122151978 0.10555327733470168 2.5019239215991047 0.01958688043902709 0.0370418567411503 9.667949354398488e-08 7.014665633312265 0.4210088090192714 NNCPFS(ph)ADENYRPLAK ddPTM_A549_PD325901_60min_R1 1 NNCPFSADENYRPLAK 16 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 NNCPFS(0.993)ADENY(0.007)RPLAK 43.37 0.018571 9661300.0 3528.1 3612.4 5072.2 4871.0 4900.7 4618.8 4400.5 4950.8 4134.9 4780.5 5059.6 True False 3886.2701147500547 3916.829625718903 5416.4299936163925 5171.870607156361 4556.491738497185 4581.186024158258 4567.9634355459975 4852.052410172533 3961.1245325020814 4478.658414154765 4437.301275446976 0.8758184025623963 0.8827053613402337 1.220658606975202 1.1655441643717082 1.026861025576453 1.0324261842456905 1.029446312519282 1.0934692302775357 0.8926877592063142 1.0093203359746228 1.0 12.115466794511116 -8.75859556794799 24.999307559454685 0.949324775578276 1.044614316209652 0.08673472694201811 0.10125485874364386 109.40498167588127 961753.359251364 0.01830139016636202 0.020306885691792557 1.7434296677430743e-09 8.75859556794799 0.09528954063137596 NNDQPQSANANEPQDSTVNLQS(ph)PLK ddPTM_A549_MK2206_60min_R1 1 NNDQPQSANANEPQDSTVNLQSPLK 25 0 P37275-3;P37275-4;P37275-5;P37275;P37275-2 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 NNDQPQSANANEPQDSTVNLQS(1)PLK 131.03 4.1066e-24 7195400.0 1399.4 1278.4 1145.6 1507.0 1699.0 1415.8 1388.6 1780.1 2083.9 2518.0 2052.8 True False 1635.5845079548335 1343.4650995121128 1308.0633062580985 1876.2150676518004 1449.07935065169 1565.619016268021 1640.8906456704626 2032.4346263276132 1611.8999773044884 1949.1820511730505 1543.0331056022044 1.059980179308278 0.8706651170570928 0.8477221269647331 1.2159266452806041 0.9391109921041864 1.0146373467839511 1.0634189504508829 1.3171685163128166 1.0446308452179367 1.2632146673303792 1.0 10.591553299763065 -6.2297703849931105 24.999731953534543 1.0497942835905723 0.9205767486122307 0.19335620601905468 0.13074892176235725 838.570014926265 661972.6336690669 0.015712882062013187 0.041568187043607145 5.891550640759944e-07 6.2297703849931105 -0.12921753497834154 NNEES(ph)PTATVAEQGEDITSKK ddPTM_A549_PD325901_60min_R1 2 NNEESPTATVAEQGEDITSKK 21 1 Q13451;Q13451-2 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed 1 NNEES(0.806)PT(0.153)AT(0.041)VAEQGEDITSKK;NNEES(0.966)PT(0.032)AT(0.003)VAEQGEDITSKK 105.84 3.3270999999999993e-10 4669900.0 2444.5 3008.6 2879.8 3391.6 3895.1 3625.7 2974.0 3354.8 3205.5 3255.2 3870.2 True False 2692.663840454211 3262.145280682616 3075.2405456441934 3601.0914291175345 3621.521613365514 3596.1735012970016 3087.1771974352455 3287.8858822103143 3070.7839824265225 3049.6661164640905 3394.1899352191667 0.7933156045612817 0.9610968575546069 0.9060307773983254 1.0609575474110904 1.0669767109340238 1.0595086220667826 0.9095475669766556 0.9686805821012523 0.9047177798045761 0.8984960107328731 1.0 11.728851583464804 -4.895341006391842 1.6594991789258715 0.9714092339026734 0.5262523837303742 0.4029486152261831 0.06303693140937548 2.5056966815376382 2.958304408504853 0.009435480773902482 2.4036413201330156 1.2725035236685483e-05 4.895341006391842 -0.4451568501722992 NNEESPTAT(ph)VAEQGEDITSKK ddPTM_A549_MK2206_60min_R1 1 NNEESPTATVAEQGEDITSKK 21 1 Q13451;Q13451-2 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed 1 NNEES(0.212)PT(0.282)AT(0.506)VAEQGEDITSKK 81.297 8.230399999999999e-05 3814800.0 1556.3 2311.0 2113.9 2515.4 2690.2 2151.2 2285.5 2642.7 3618.6 3667.0 2941.8 True False 1818.9653921181264 2428.6200289209114 2413.682806476077 3131.6731129205955 2294.475143686391 2378.83855614901 2700.745766008817 3017.3108179293217 2798.9928777167897 2838.622153157895 2211.2698704503923 0.8225886023344762 1.0982920092092825 1.0915369664872507 1.4162328871612289 1.0376278238797925 1.075779391714177 1.2213551145879487 1.3645149595941244 1.2657852915739722 1.2837067926854733 1.0 11.110659391680224 -5.188974805514203 2.0762744875473977 1.1585302274714164 0.6863865729621027 0.3793515293338854 0.1316398447572654 0.8597663390821036 3.4235405273259447 0.020302951024294937 0.8098916726183827 6.471801591645361e-06 5.188974805514203 -0.4721436545093137 NNEVS(ph)FSQIKPK ddPTM_A549_MK2206_60min_R1 2 NNEVSFSQIKPK 12 1 Q12913 Q12913 PTPRJ Receptor-type tyrosine-protein phosphatase eta 1 NNEVS(0.979)FS(0.021)QIKPK;NNEVS(0.919)FS(0.081)QIKPK 117.0 6.369299999999999e-06 33784000.0 9786.9 13635.1 15627.6 13058.5 18565.1 15235.6 13353.2 14954.5 22458.7 18756.0 18132.0 True False 11438.68945326795 14329.068349779092 17843.828670460072 16257.83308621834 15834.19838303925 16847.821079427216 15779.303593379533 17074.346171235487 17371.84030917429 14519.00657339226 13629.323982257985 0.8392704926640749 1.0513410913433419 1.3092233109792042 1.1928568949848153 1.161774303967788 1.2361450282757178 1.1577466067957802 1.2527654484890132 1.2745929535307943 1.0652770887457383 1.0 13.734426385446731 -5.383018939990371 3.4974284576404084 1.164954810347164 0.8345946827005132 0.5636305274821449 0.08812747328070321 0.1867814465708763 3.6550444826491644 0.015588614152550296 0.1297007483632746 4.139816202986535e-06 5.383018939990371 -0.3303601276466509 NNEVS(ph)FSQIKPK ddPTM_A549_PD325901_60min_R1 3 NNEVSFSQIKPK 12 1 Q12913 Q12913 PTPRJ Receptor-type tyrosine-protein phosphatase eta 1 NNEVS(0.84)FS(0.16)QIKPK;NNEVS(0.68)FS(0.32)QIKPK;NNEVS(0.976)FS(0.024)QIKPK 117.4 6.115499999999999e-06 72087300.0 24246.4 26425.3 28646.6 32632.7 41193.6 39987.6 35632.3 37244.8 34176.7 35512.3 30759.5 True False 26707.87667874371 28652.252770598418 30590.730541999776 34648.34776476109 38300.303646205146 39661.95424344655 36988.306675242726 36501.92324601965 32740.37215167572 33270.04731743299 26976.276500535874 0.9900505237708831 1.0621277836483196 1.133986395097637 1.2844006756852753 1.4197772492969638 1.4702531034132407 1.3711420356515092 1.3531119925055095 1.2136727672933418 1.233307618150047 1.0 14.719403608305203 -10.083838390325836 0.9225973967966552 1.0205990088885926 1.2624413738165654 0.04650133653941646 0.15577072961601185 0.517716012136732 0.8833249840798568 0.06599451048748527 0.03111751591728481 8.244448503779413e-11 10.083838390325836 0.24184236492797284 NNLAGAEELFAR ddPTM_A549_MK2206_60min_R1 1 NNLAGAEELFAR 12 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 61.343999999999994 0.022719999999999997 1064600.0 925.12 1041.8 1014.8 968.62 1255.4 871.36 909.96 1272.4 1251.2 1363.7 1320.8 False True 1081.2576389875487 1094.8231701124212 1158.7138994332383 1205.9319434830045 1070.7323230183245 963.5667368380441 1075.287953286976 1452.7665965615743 967.8051977558302 1055.6392228692168 992.808907774451 1.089089381169404 1.102753169858893 1.1671066711424773 1.2146667239180045 1.07848782845689 0.970546022797118 1.0830764559691712 1.4632892444712207 0.9748151836442818 1.0632854062879136 1.0 9.955372249586642 NNLSAS(ph)MFDLSMK ddPTM_A549_MK2206_60min_R1 2 NNLSASMFDLSMK 13 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 NNLS(0.031)AS(0.968)MFDLS(0.001)MK;NNLS(0.018)AS(0.961)MFDLS(0.021)MK 94.71700000000001 6.0938999999999994e-05 8007600.0 3779.7 4016.6 4962.9 4241.8 5853.3 4584.4 4415.3 4033.8 7446.799999999999 5684.5 5649.9 True False 4417.620955207147 4221.02778371429 5666.713846568009 5281.041190421638 4992.287323819621 5069.518165121569 5217.502857431076 4605.603502994402 5760.111690096003 4400.3675019432885 4246.873900692662 1.0402053506902187 0.9939140841986959 1.3343259016105407 1.2435125963029665 1.1755204982670624 1.193705837202921 1.2285513955524099 1.0844690967262371 1.3563180411729516 1.0361427263535168 1.0 12.052185557099184 -5.72780041810282 24.999078529835618 1.1853290366918832 1.0170594189178261 0.26675637070349745 0.10647442044487258 232.89885654840364 173077.62487381644 0.017965403768166386 0.06957149500005001 1.8715420179548184e-06 5.72780041810282 -0.16826961777405702 NNLSAS(ph)MFDLSMK ddPTM_A549_PD325901_60min_R1 4 NNLSASMFDLSMK 13 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 NNLS(0.025)AS(0.555)MFDLS(0.42)MK;NNLS(0.071)AS(0.921)MFDLS(0.007)MK;NNLS(0.007)AS(0.993)MFDLSMK;NNLS(0.049)AS(0.942)MFDLS(0.009)MK 113.01 9.8388e-06 17798400.0 8924.900000000001 9920.3 10822.0 10830.300000000001 12389.1 12692.4 11986.7 12647.2 14184.2 11520.400000000001 11348.1 True False 9830.949277835873 10756.318496295875 11556.445997972593 11499.263033604084 11518.932356074738 12589.037302551802 12442.860427873922 12394.941674463544 13588.087400884197 10792.999977916243 9952.355641532891 0.9878012434372453 1.0807811621409416 1.1611769528960114 1.1554312815767638 1.157407630009146 1.2649304100443903 1.2502427441346375 1.2454279289153736 1.3653136895730265 1.0844668706245986 1.0 13.280822324904355 -5.277896787314434 1.0390374464937464 1.1928454423207673 0.8826527247207031 0.3236752956774692 0.09139718101890133 2.3566033140366014 1.9997795465818449 0.019831222650342928 0.8023815662532452 5.273551756483734e-06 5.277896787314434 -0.31019271760006417 NNLSAS(ph)MFDLSMKDKPR ddPTM_A549_PD325901_60min_R1 1 NNLSASMFDLSMKDKPR 17 2 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 NNLS(0.19)AS(0.799)MFDLS(0.01)MKDKPR 41.257 0.035394 5233500.0 1239.0 1406.2 1375.1 1716.7 1913.1 2024.2 2248.4 2034.9 1629.4 1487.0 1773.7 True False 1364.7823678964087 1524.70540905933 1468.4225551480422 1822.7366600914224 1778.7304558367098 2007.7155863213713 2333.964092371689 1994.3123231518312 1560.9219843911321 1393.110566226993 1555.5461444106859 0.8773654017274123 0.9801736930388266 0.9439916394793609 1.1717663706993153 1.143476496809792 1.290682114147111 1.5004145654939116 1.2820656785513558 1.003455918038666 0.895576496546021 1.0 10.603205476914669 -6.237527665665151 20.16598303224447 1.0972153484099003 0.9384760216126722 0.20705084566036547 0.16686143182568022 120.9345439612904 101985.92067361668 0.026911524237247273 0.07108347827072284 5.7872512090997e-07 6.237527665665151 -0.15873932679722813 NNLSASMFDLS(ph)MK ddPTM_A549_MK2206_60min_R1 1 NNLSASMFDLSMK 13 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 NNLS(0.005)AS(0.091)MFDLS(0.904)MK 63.283 0.0023396000000000003 6756300.0 1942.7 2595.1 2052.8 2510.8 3044.0 2255.8 2403.2 2331.1 3590.0 2713.0 3224.7 True False 2270.5802655451303 2727.179505431699 2343.9179077222616 3125.946112714096 2596.2316323624173 2494.507258721148 2839.830332475337 2661.5405636943424 2776.8707320519743 2100.1314157396687 2423.917992807594 0.9367397215097798 1.1251121174577532 0.9669955479835894 1.2896253594344385 1.0710888899979798 1.0291219695233134 1.1715868032259609 1.0980324299715738 1.1456124919620565 0.8664201602411113 1.0 11.243125174326432 -5.251592046546495 23.684961061985465 1.085971331059309 0.9367395499079509 0.1166185610584114 0.10755204928694193 817.8047728117491 1966910.249199294 0.011808471613433418 0.20500139798584863 5.6028365545651524e-06 5.251592046546495 -0.14923178115135816 NNLSASMFDLS(ph)MK ddPTM_A549_PD325901_60min_R1 1 NNLSASMFDLSMK 13 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 NNLS(0.017)AS(0.182)MFDLS(0.801)MK 46.001000000000005 0.014899 1672700.0 2466.5 2157.4 2508.9 2641.9 2969.8 2842.5 3256.3 3075.8 2558.2 2922.0 3490.7 True False 2716.897264258667 2339.21166939596 2679.169041241307 2805.0841628097687 2761.211493253807 2819.351622427871 3380.220278415733 3014.450756081578 2450.6877503801375 2737.504421328359 3061.366029370455 0.887478739292529 0.7641071492117524 0.8751547562550879 0.9162851275862008 0.9019540514799622 0.9209456155779084 1.1041542389855445 0.9846750526272336 0.8005209853602842 0.8942100993690403 1.0 11.579959834325193 -6.076668047063565 3.404453206035331 0.9250625347470028 0.824259809866666 0.23539604231668754 0.07762838477474286 0.3493253084111714 7.762254516838079 0.013407416358958575 0.041109377801589894 8.381696922532176e-07 6.076668047063565 -0.10080272488033681 NNLVIDT(ph)PR ddPTM_A549_MK2206_60min_R1 2 NNLVIDTPR 9 0 Q9P2D1;Q9HCK8;H0YJG4;Q9HCK8-2;A0A2R8Y840 Q9P2D1;Q9HCK8 CHD7;CHD8 Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 8 1 NNLVIDT(1)PR;NNLVIDT(1)PR 112.83 0.00027827 11907000.0 1514.62 2129.7200000000003 1672.04 2093.7599999999998 2687.0 2275.3 2065.17 2312.3 3984.5 2568.8 2788.5 True False 1770.2508270962912 2238.1136512303956 1909.160414277051 2606.7312939924564 2291.745859447376 2516.0707357780966 2440.3846570065325 2640.075606121757 3082.017111939025 1988.5062958909175 2096.038491315154 0.844569808441615 1.0677827055676334 0.9108422494088614 1.243646671944879 1.093370121275505 1.200393383138396 1.1642842758461556 1.2595549256661067 1.470401008716792 0.9486974137785201 1.0 11.033449495201383 -6.008852814994972 0.8052777163008519 1.2246977521638744 0.8538982039472746 0.2633502930994217 0.14900214557316271 1.0983200444446817 0.919701059002209 0.02859228710620385 0.288209522373722 9.798219966973452e-07 6.008852814994972 -0.3707995482165999 NNMT(ph)ASMFDLSMKDK ddPTM_A549_MK2206_60min_R1 1 NNMTASMFDLSMKDK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.541)AS(0.444)MFDLS(0.015)MKDK 46.3 0.0092521 13994000.0 6552.6 7892.0 8098.3 6882.8 10802.0 8564.9 7366.6 7045.3 11799.0 11031.0 9498.9 True False 7658.51868431102 8293.669090542546 9246.760713224476 8569.086308980628 9213.040109322876 9471.232033079516 8705.015865185103 8043.992850326357 9126.545339131273 8539.089438637771 7140.060973696791 1.072612504644452 1.1615683845131746 1.2950534662502937 1.2001418952230536 1.2903307329254912 1.3264917579794495 1.2191794856169207 1.126600022038965 1.2782167229036943 1.195940688755299 1.0 12.801720679094947 -10.8558962928348 0.9164839778033411 0.988909147323055 1.2256178365692783 0.07057230717866436 0.09314618023133657 0.39762856151766823 0.5452023537425251 0.06681242076225635 0.013463673823647913 1.3934895209527115e-11 10.8558962928348 0.23670868924622324 NNMTAS(ph)MFDLSMK ddPTM_A549_MK2206_60min_R1 5 NNMTASMFDLSMK 13 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.147)AS(0.825)MFDLS(0.028)MK;NNMT(0.022)AS(0.747)MFDLS(0.231)MK;NNMT(0.374)AS(0.602)MFDLS(0.025)MK;NNMT(0.364)AS(0.635)MFDLS(0.001)MK;NNMTAS(1)MFDLSMK 112.72 3.0619e-05 6846700.0 4701.16 5739.66 5797.639999999999 5844.27 9524.9 6808.730000000001 6384.3 6486.700000000001 9937.8 8801.800000000001 8633.900000000001 True False 5494.600875673109 6031.784177929985 6619.832530459319 7276.116412359254 8123.799827558733 7529.225289330816 7544.244670282253 7406.209589685597 7686.904167405603 6813.467266884419 6489.864346482303 0.846643409218768 0.9294160641738821 1.0200263329151806 1.1211507704784498 1.2517672779958908 1.1601514126272727 1.1624656953533175 1.1411963631720563 1.1844475873478206 1.0498628173295361 1.0 12.66397260746237 -5.809787976802504 1.954355598656986 1.1165229204065696 0.8577868914115016 0.6801755096178868 0.06539762266084624 0.22189781213855386 1.5662017270538642 0.012293062083351217 0.06984291487440761 1.5495729380407228e-06 5.809787976802504 -0.2587360289950681 NNMTAS(ph)MFDLSMK ddPTM_A549_PD325901_60min_R1 1 NNMTASMFDLSMK 13 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.035)AS(0.95)MFDLS(0.015)MK 51.54600000000001 0.0092075 1381700.0 2194.9 2146.0 2761.5 2481.7 3444.3 2254.1 2768.9 2773.0 3019.2 2849.9 2495.0 True False 2417.724632200021 2326.850951387655 2948.911996248502 2634.988972650365 3202.38425018994 2235.7433569444725 2874.2720047002194 2717.6903396235825 2892.3135235508203 2669.9568276330237 2188.1308171081137 1.104926914468187 1.0633966366155738 1.3476854186194658 1.2042191225718535 1.4635250439104404 1.0217594576448974 1.313574116422768 1.24201456255497 1.3218192902074162 1.2201998192967745 1.0 11.095483276700898 -10.90264545858121 1.1335970227197092 0.998920764109272 1.2394816748203232 0.017911180296688256 0.14004998216361528 0.45362665409972497 1.0277390593095623 0.08616989709494918 0.02016236906216103 1.2512801106410955e-11 10.90264545858121 0.24056091071105123 NNMTAS(ph)MFDLSMKDK ddPTM_A549_MK2206_60min_R1 9 NNMTASMFDLSMKDK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.171)AS(0.829)MFDLSMKDK;NNMT(0.277)AS(0.723)MFDLSMKDK;NNMT(0.109)AS(0.863)MFDLS(0.029)MKDK;NNMT(0.004)AS(0.996)MFDLSMKDK;NNMT(0.142)AS(0.602)MFDLS(0.256)MKDK;NNMT(0.284)AS(0.716)MFDLSMKDK;NNMT(0.018)AS(0.981)MFDLS(0.001)MKDK;NNMT(0.004)AS(0.995)MFDLSMKDK;NNMT(0.062)AS(0.937)MFDLSMKDK 125.73 3.4692e-08 163224000.0 34775.4 44908.1 49228.399999999994 46130.9 66361.1 51068.4 45495.9 47179.4 76108.4 65509.899999999994 61868.4 True False 40644.63734309885 47193.730471996125 56209.72736190304 57432.9725708948 56599.47009801757 56472.424191539605 53761.91612153162 53867.22443085282 58869.96892014048 50711.16809139847 46504.76879902545 0.8739885906915981 1.0148148607285434 1.2086873844017685 1.2349910354161004 1.2170680891376384 1.2143361992743213 1.1560516805033176 1.1583161430958808 1.2658910137700579 1.0904509236579878 1.0 15.50509104351086 -5.511650747789615 3.3638615359936 1.1553777845909463 0.8857111305951949 0.6100615680742105 0.07270755213504887 0.1814021756760861 4.012503118564543 0.014317109042570709 0.09095059931779999 3.0785715542386536e-06 5.511650747789615 -0.2696666539957514 NNMTAS(ph)MFDLSMKDK ddPTM_A549_PD325901_60min_R1 13 NNMTASMFDLSMKDK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.069)AS(0.895)MFDLS(0.036)MKDK;NNMT(0.004)AS(0.996)MFDLSMKDK;NNMT(0.032)AS(0.937)MFDLS(0.031)MKDK;NNMT(0.057)AS(0.943)MFDLSMKDK;NNMT(0.365)AS(0.631)MFDLS(0.004)MKDK;NNMT(0.254)AS(0.74)MFDLS(0.005)MKDK;NNMT(0.176)AS(0.82)MFDLS(0.004)MKDK;NNMT(0.001)AS(0.999)MFDLSMKDK;NNMT(0.249)AS(0.744)MFDLS(0.007)MKDK;NNMT(0.278)AS(0.722)MFDLSMKDK;NNMT(0.047)AS(0.953)MFDLSMKDK;NNMT(0.004)AS(0.996)MFDLSMKDK;NNMT(0.091)AS(0.815)MFDLS(0.094)MKDK 145.05 3.0888e-14 316535700.0 78277.40000000001 80961.2 92032.49999999999 98629.29999999999 107269.19999999998 111344.09999999999 106720.8 114461.9 114865.7 106992.0 109595.99999999999 True False 86224.06402322362 87784.08445735608 98278.3788863807 104721.40785760754 99734.98145065026 110437.35056561859 110782.11844386248 112178.86761087671 110038.2940852318 100236.50686063098 96116.3867862849 0.8970797478575959 0.913310283422787 1.02249348079327 1.0895270968774131 1.0376480513402082 1.1489960688095402 1.1525830521510019 1.1671149047696392 1.1448442639640866 1.0428659483788876 1.0 16.552494795147 -5.872421190574768 2.0253255205227614 1.0879659769181693 0.8912203361493767 0.667245841219885 0.05209795966815246 0.21098274580661644 1.6402548480595995 0.009765899680464358 0.04883282840153855 1.3414633425121187e-06 5.872421190574768 -0.19674564076879264 NNMTASMFDLS(ph)MKDK ddPTM_A549_PD325901_60min_R1 1 NNMTASMFDLSMKDK 15 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q7L804;Q7L804-2 Q6WKZ4;Q7L804 RAB11FIP1;RAB11FIP2 Rab11 family-interacting protein 1;Rab11 family-interacting protein 2 1 NNMT(0.016)AS(0.458)MFDLS(0.526)MKDK 51.486999999999995 0.004539 37019000.0 6679.9 6808.3 7775.5 8122.9 8494.4 8790.2 8139.8 9408.2 9404.4 7851.7 7836.6 True False 7358.038530517527 7382.059334730927 8303.192187879862 8624.633084555615 7897.782648089141 8718.615525581523 8449.564543269473 9220.546070409886 9009.165772681954 7355.942322020497 6872.747880300376 1.070610861720704 1.0741059418010095 1.2081328069198674 1.2549031675200446 1.149144823241205 1.2685778203172604 1.2294303079978808 1.341609823465094 1.3108535231599685 1.0703058587533991 1.0 12.746671321210199 -5.75389792534805 23.836753076616574 1.1865737612213287 1.0723582712974764 0.19910311518186885 0.09672440771169899 169.93753257613858 537105.5531621163 0.017716853320372254 0.06583219296448926 1.7623902221305711e-06 5.75389792534805 -0.11421548992385233 NNPS(ph)PPPDSDLER ddPTM_A549_MK2206_60min_R1 2 NNPSPPPDSDLER 13 0 E7ESD5;E9PLN6;F2Z2Y1;O95677-3;O95677-5;O95677-2;O95677-4;O95677 E7ESD5 EYA4 Eyes absent homolog;Eyes absent homolog 4 1 NNPS(1)PPPDSDLER;NNPS(1)PPPDSDLER 220.06 2.5018e-38 56441000.0 5795.299999999999 9879.2 9271.400000000001 9761.0 13967.8 10323.4 8933.3 9072.2 13978.599999999999 11470.8 10773.5 True False 6773.404958518397 10382.009082525075 10586.223932996965 12152.445438187948 11913.155123032771 11415.815335881683 10556.364975491817 10358.212132447274 10812.46941923725 8879.53831318341 8098.142616526378 0.8364146297813393 1.282023492811533 1.307240985283836 1.5006460139869238 1.4710972240376283 1.4096831676667099 1.303553848749069 1.2790849239069502 1.3351789331508657 1.0964907304870612 1.0 12.983375335226913 -10.662471341276024 0.7577862560433651 0.982530680287827 1.3180178338158424 0.24573990639083843 0.16749269913117026 0.7223508124138311 0.6777105805326616 0.14769598106280793 0.03214848409329789 2.1753475786222734e-11 10.662471341276024 0.3354871535280154 NNPS(ph)PPPDSDLER ddPTM_A549_PD325901_60min_R1 2 NNPSPPPDSDLER 13 0 E7ESD5;E9PLN6;F2Z2Y1;O95677-3;O95677-5;O95677-2;O95677-4;O95677 E7ESD5 EYA4 Eyes absent homolog;Eyes absent homolog 4 1 NNPS(1)PPPDSDLER;NNPS(1)PPPDSDLER 249.97 1.2852999999999996e-68 68302000.0 10674.5 10065.2 11853.9 12166.7 14969.900000000001 14206.7 14536.900000000001 13863.400000000001 14543.5 13786.0 12839.599999999999 True False 11758.167381848438 10913.429727822471 12658.376937291368 12918.209426419471 13918.465867351388 14091.005345416374 15090.109684396915 13586.88361137309 13932.287271383599 12915.549607266526 11260.410596930384 1.0442041416370504 0.9691857711474127 1.1241487890985142 1.1472236571853789 1.2360531392297183 1.2513758023404242 1.3401029700027562 1.2066064105226242 1.237280572626861 1.1469874474015485 1.0 13.458971814015122 -5.882150040665829 4.742623638848652 1.157352631638346 1.0077094942878888 0.3514181153363086 0.08803995553597736 0.25669859928539845 9.429500084205737 0.016698480762137997 0.05540674262381815 1.3117466366617443e-06 5.882150040665829 -0.1496431373504572 NNRPAFFS(ph)PSLK ddPTM_A549_MK2206_60min_R1 2 NNRPAFFSPSLK 12 1 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 NNRPAFFS(0.906)PS(0.094)LK;NNRPAFFS(0.981)PS(0.019)LK 111.64 1.7542999999999998e-05 25169000.0 4672.7 5994.6 6227.200000000001 5916.1 9487.7 8153.8 6704.2 7279.5 10057.099999999999 6900.700000000001 7216.9 True False 5461.3375234533005 6299.6995349932 7110.310597704631 7365.54476558382 8092.071898280188 9016.629703945608 7922.266359429579 8311.39141753377 7779.182907888558 5341.82707725571 5424.7445536927835 1.0067455655097357 1.1612896188272699 1.3107180489935573 1.3577680373115222 1.491696395689577 1.6621298228333576 1.4603943616177575 1.5321258605395458 1.4340182898737672 0.9847149528210265 1.0 12.405339488615997 -10.661654482480321 0.9642244036722177 1.0035147919515883 1.3884381733155025 0.42782171393378543 0.1710700194221302 0.4666062822563021 0.7827343320723633 0.12047207801862937 0.03326902374089345 2.1794430116713205e-11 10.661654482480321 0.38492338136391413 NNRPAFFS(ph)PSLK ddPTM_A549_PD325901_60min_R1 2 NNRPAFFSPSLK 12 1 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 NNRPAFFS(0.991)PS(0.009)LK;NNRPAFFS(0.856)PS(0.144)LK 116.96 6.3905999999999994e-06 39209000.0 9409.2 9569.0 9972.7 9204.5 12466.7 11049.1 10773.8 11453.7 11645.0 10166.8 10954.3 True False 10364.415057313066 10375.413212408424 10649.50739271681 9773.041060063782 11591.081999780203 10959.119792917427 11183.802854649572 11225.24696824617 11155.601146578332 9524.86651292306 9606.990545029023 1.0788409761344004 1.0799857836621907 1.1085164852407625 1.017284342506268 1.206525804876306 1.1407443092142981 1.164131764492726 1.1684457183164907 1.161196224175594 0.9914516380836393 1.0 13.22986885242189 -4.322600076094064 16.22779419296413 1.0982439970109592 1.1057857727465958 0.0 0.07083271525520687 0.0 0.0 0.010195053686653197 0.0 4.757731441795302e-05 4.322600076094064 0.0075417757356366355 NNRPAFFS(ph)PSLKR ddPTM_A549_MK2206_60min_R1 1 NNRPAFFSPSLKR 13 2 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 NNRPAFFS(0.939)PS(0.061)LKR 100.43 3.1392e-05 29026000.0 2326.5 3372.8 3383.1 3103.2 4518.1 3785.1 3595.7 3576.4 4447.8 3843.0 3767.9 True False 2719.1563225360287 3544.461113606424 3862.874451293445 3863.48413930794 3853.4934750908797 4185.636769653969 4248.992146505316 4083.3656522656474 3440.3804016770973 2974.8636309205845 2832.2264412502655 0.960077302765268 1.251475186440865 1.3639002853134186 1.3641155534168494 1.3605880585557217 1.4778609184250997 1.5002303786944484 1.441751123000983 1.2147264609811237 1.050362212425131 1.0 11.4677209005805 -9.574021577145555 1.0813390824944105 1.0433054512078295 1.344359938261903 0.4013320098050238 0.14231899562558759 0.30651238044761103 0.7439942401528963 0.042058052262884754 0.02991975210317644 2.666726169703945e-10 9.574021577145555 0.30105448705407345 NNRPAFFS(ph)PSLKR ddPTM_A549_PD325901_60min_R1 3 NNRPAFFSPSLKR 13 2 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 NNRPAFFS(0.676)PS(0.324)LKR;NNRPAFFS(0.754)PS(0.246)LKR;NNRPAFFS(0.982)PS(0.018)LKR 108.14 1.5652000000000002e-05 126896000.0 11622.4 11507.5 13768.900000000001 13125.7 15331.0 15001.7 13623.5 15266.0 15299.2 13881.7 14183.099999999999 True False 12802.29749204133 12477.277410574754 14703.340353121866 13936.444678372449 14254.203449078761 14879.53112899779 14141.949747565246 14961.507654054687 14656.227828401137 13005.20709293425 12438.668614078586 1.029233745929301 1.0031039332016989 1.1820670530992388 1.1204128923089582 1.145958935906153 1.1962318147262592 1.136934360608242 1.2028222728854316 1.1782794672906254 1.04554655296584 1.0 13.602544452907095 -3.9794093494831655 11.37915371688483 1.1065666059105572 0.6197184462553182 0.0 0.07542516771793568 0.0 0.0 0.011691685516966033 0.0 0.00010485536358954988 3.9794093494831655 -0.486848159655239 NNRPAFFSPS(ph)LKR ddPTM_A549_MK2206_60min_R1 1 NNRPAFFSPSLKR 13 2 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 NNRPAFFS(0.367)PS(0.633)LKR 89.506 3.856e-05 23744000.0 1959.9 2607.7 2854.3 2923.8 4082.2 2855.5 2972.0 2924.3 3974.5 2994.9 3925.5 True False 2290.683205045504 2740.420791612747 3259.082659787438 3640.131131254368 3481.7137876576408 3157.6671146725057 3511.9739298088807 3338.828480293152 3074.2820959723035 2318.350009951617 2950.6900117115433 0.7763211980769192 0.928738966389482 1.1045154343058259 1.2336542018329182 1.1799659651940455 1.0701453226667161 1.1902212417670284 1.1315415943528644 1.0418858245936418 0.7856975828534632 1.0 11.526836649329937 -5.4983754222171015 3.053925222618451 1.0712323190909512 0.7830374439096583 0.39654969969316856 0.1150514575310148 0.17960851441783962 3.0774349846862044 0.013187124654039819 0.09390516709719413 3.174129035175357e-06 5.4983754222171015 -0.28819487518129283 NNS(ph)FTAPSTVGK ddPTM_A549_MK2206_60min_R1 2 NNSFTAPSTVGK 12 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 NNS(0.982)FT(0.017)APSTVGK;NNS(0.927)FT(0.072)APSTVGK 167.32 2.4353000000000003e-15 12004500.0 8507.1 9275.1 7929.700000000001 8270.4 10988.5 9082.3 8287.5 7986.7 14089.0 12543.9 13534.3 True False 9942.890501373846 9747.162972844799 9054.250698005273 10296.648371272368 9372.106206377934 10043.382957657193 9793.231474862425 9118.839183242937 10897.863995509826 9710.224277883095 10173.359782322641 0.9773458045444081 0.9581065824273307 0.8899961164981164 1.0121187681933705 0.921240023641258 0.9872238053655296 0.9626349293061736 0.8963449026041473 1.071215825321158 0.954475658548487 1.0 13.312508591765098 -8.76901240890247 24.999989145022774 1.0336296950305663 0.9515450995806597 0.19562081522938313 0.04506222125380886 109.3014877961913 360823.7031025065 0.006986669027630437 0.00750609143128837 1.7021098740741216e-09 8.76901240890247 -0.08208459544990665 NNS(ph)NTCNIENELEDS(ph)RK ddPTM_A549_MK2206_60min_R1 1 NNSNTCNIENELEDSRK 17 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 2 NNS(0.98)NT(0.021)CNIENELEDS(1)RK 50.028999999999996 0.004931100000000001 2121200.0 446.74 628.42 517.06 361.92 611.62 947.78 626.09 692.63 1012.2 910.07 700.09 True False 522.1387902556401 660.4038938011586 590.3868829729503 450.59041624720635 521.6515082081149 1048.073450514554 739.8424487597727 790.8124235904141 782.9383161512559 704.4845549289352 526.2383314989512 0.9922097251417739 1.2549520897119877 1.121900187869775 0.8562478049892958 0.9912837529760118 1.9916326648596536 1.4059075602729012 1.502764766940947 1.4878017606986433 1.338717673648483 1.0 9.03957252883218 NNS(ph)NTCNIENELEDSR ddPTM_A549_MK2206_60min_R1 1 NNSNTCNIENELEDSR 16 0 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 NNS(0.5)NT(0.5)CNIENELEDSR 47.545 0.026108999999999997 3191200.0 729.85 954.53 811.18 411.31 1159.6 894.61 876.11 860.25 1525.5 1041.5 854.98 True False 853.030836880688 1003.1114998727287 926.2175216222448 512.0809684644075 989.0243761128309 989.2770364059437 1035.2878464484725 982.1930719051352 1179.9766857229215 806.2244266468355 642.6648697524224 1.3273338516376445 1.560862507171371 1.4412138662240197 0.796808714099589 1.5389426475012373 1.5393357922100965 1.6109295764794216 1.5283129950506105 1.8360684413596327 1.2545020968042364 1.0 9.327922801686876 NNS(ph)NTCNIENELEDSR ddPTM_A549_PD325901_60min_R1 1 NNSNTCNIENELEDSR 16 0 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 NNS(0.714)NT(0.286)CNIENELEDSR 109.36 5.6006e-07 4278300.0 788.34 1113.8 1117.2 862.53 1324.5 862.31 645.3 1171.7 1070.4 1010.1 1298.8 True False 868.3716964547656 1207.6638348814402 1193.0199102693562 915.8065191522422 1231.4716892769434 855.2876332579697 669.857244621709 1148.3295243191315 1025.4148104162691 946.3221136152556 1139.0558337715493 0.7623609578289798 1.0602323425031077 1.0473761468909961 0.8040049416365289 1.08113373617463 0.7508741958908288 0.5880811324267855 1.0081415592393534 0.9002322625581916 0.8307951950712289 1.0 10.153622750875 -4.1725300635034515 15.700844152307269 0.9242741149791762 0.9036644146599526 0.0 0.154949248474209 0.0 0.0 0.019329105415102535 0.0 6.721557783407764e-05 4.1725300635034515 -0.0206097003192236 NNS(ph)NTCNIENELEDSRK ddPTM_A549_PD325901_60min_R1 1 NNSNTCNIENELEDSRK 17 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 NNS(0.989)NT(0.011)CNIENELEDSRK 129.26 2.1857e-12 21861000.0 6253.4 7698.4 7069.5 7778.2 8356.5 7728.8 7490.3 8216.9 6418.0 7914.0 7370.2 True False 6888.240564490235 8347.171185537145 7549.278782356982 8258.64174842611 7769.568268359973 7665.859215275475 7775.34746534943 8053.007483466653 6148.273779196197 7414.308689388315 6463.712123547182 1.0656787358144406 1.2913896884622316 1.1679478661890126 1.2776933116095985 1.2020288218059065 1.1859840086857973 1.2029229205651015 1.2458796631938012 0.9511985777952813 1.1470666619539145 1.0 12.658147230403511 -8.763229541902469 24.999999405511392 0.9769548716475176 1.208218065302041 0.456483201853916 0.07733932898802012 14.217187184433497 198545.52166673812 0.009105399258433847 0.009938315485241288 1.7249259590577052e-09 8.763229541902469 0.2312631936545233 NNS(ph)PPTVGAFGHTR ddPTM_A549_MK2206_60min_R1 2 NNSPPTVGAFGHTR 14 0 Q86XL3;Q86XL3-3;F5H1D4 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 NNS(0.992)PPT(0.008)VGAFGHTR;NNS(0.984)PPT(0.016)VGAFGHTR 92.679 1.8576e-05 93981000.0 3352.9 3517.1 3895.2 4124.3 5198.7 3843.8 3698.7000000000003 3809.5 6201.299999999999 5764.700000000001 6264.4 True False 3918.787549465315 3696.1053672512926 4447.597931683432 5134.753685146866 4433.97811667625 4250.54836469206 4370.705913251719 4349.508291104461 4796.715451441199 4462.45026624197 4708.7765913554385 0.8322305111394714 0.7849396325229682 0.9445336480495827 1.0904644944450015 0.9416412162803232 0.902686352224777 0.9282041372010803 0.923702411171824 1.0186755218430201 0.9476878292408937 1.0 12.201136560030571 -5.864030356466851 4.698762382087579 0.9899403297705786 0.8093558064405167 0.5353923375893836 0.05433918191585445 0.09941508909991999 3.65800969400594 0.007856172584037195 0.026284419484518172 1.3676332269514955e-06 5.864030356466851 -0.1805845233300618 NNS(ph)PPTVGAFGHTR ddPTM_A549_PD325901_60min_R1 2 NNSPPTVGAFGHTR 14 0 Q86XL3;Q86XL3-3;F5H1D4 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 NNS(0.998)PPT(0.002)VGAFGHTR;NNS(0.994)PPT(0.006)VGAFGHTR 125.38 1.8428e-07 176984000.0 2878.2 3490.2 3152.1 3717.9 4292.0 3528.8 3017.0 3803.2999999999997 3643.7 4179.5 4075.2 True False 3170.392745181145 3784.3314028579666 3366.020461117111 3947.5462390364646 3990.544726596182 3500.0626227699136 3131.813585965748 3727.44019786887 3490.5679603080694 3915.605656722069 3573.9762348212357 0.8870771759174059 1.058857461330392 0.9418138901769932 1.1045250386881529 1.1165560329462523 0.9793189413709072 0.8762827115223938 1.0429392791010852 0.9766623309633343 1.0955880508024478 1.0 11.803314325863107 NNSNT(ph)CNIENELEDSR ddPTM_A549_PD325901_60min_R1 1 NNSNTCNIENELEDSR 16 0 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 NNS(0.396)NT(0.604)CNIENELEDSR 70.41 0.0014979000000000001 3843400.0 761.47 770.29 949.49 736.08 903.96 611.23 760.41 479.07 497.07 753.31 939.53 True False 838.7738738354134 835.2050416329898 1013.9281011471994 781.5459898410286 840.4689680927039 606.2523455326606 789.3478186623179 469.51457302685554 476.1798765074877 705.7458780393109 823.9737661713765 1.0179618675638256 1.0136306226274652 1.2305344451176552 0.9485083408328762 1.0200190862847163 0.7357665625079712 0.957976881145198 0.5698173804834489 0.5779065985560129 0.8565149850808774 1.0 9.686454595123815 -7.092488503799043 1.749189812565865 0.7837503679911417 1.0707088968457228 0.452936393488493 0.14240359688367651 0.32318518676698127 1.9450787957108668 0.02827162173644649 0.05749864265677323 8.081863223141285e-08 7.092488503799043 0.28695852885458106 NNTAAET(ph)EDDES(ph)DGEDR ddPTM_A549_MK2206_60min_R1 1 NNTAAETEDDESDGEDR 17 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 2 NNT(0.018)AAET(0.987)EDDES(0.995)DGEDR 52.026 0.025361 785380.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 160.47 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 183.2171139187643 0.0 0.0 0.0 0.0 NNTAAET(ph)EDDES(ph)DGEDR ddPTM_A549_PD325901_60min_R1 2 NNTAAETEDDESDGEDR 17 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 2 NNT(0.001)AAET(0.999)EDDES(1)DGEDR;NNT(0.115)AAET(0.886)EDDES(0.998)DGEDR 80.638 0.0004008 3916500.0 0.0 0.0 180.3 213.6 0.0 158.33 190.71 172.6 285.65 0.0 176.79 True False 0.0 0.0 192.5362422319773 226.793586879203 0.0 157.04061297414424 197.9675734105163 169.15735759791943 273.6451238746331 0.0 155.0459507641456 0.0 0.0 1.2418011646422265 1.4627507894366052 0.0 1.012864974545726 1.2768316259459278 1.091014352611117 1.7649291872891244 0.0 1.0 7.276552038274313 -7.535529295630929 4.5932595118757344 1.3361875804687056 0.5910531093613348 0.03040942566006266 0.6313854958392077 0.1901585736453615 10.246711917650316 0.08188174612180883 0.12601160684605717 2.9138735708091117e-08 7.535529295630929 -0.7451344711073707 NNTAAET(ph)EDDES(ph)DGEDRGGGTSGSLR ddPTM_A549_MK2206_60min_R1 1 NNTAAETEDDESDGEDRGGGTSGSLR 26 1 Q6KC79 Q6KC79 NIPBL Nipped-B-like protein 2 NNT(0.193)AAET(0.807)EDDES(0.983)DGEDRGGGT(0.01)S(0.003)GS(0.003)LR 50.261 0.0047628 2550900.0 136.75 0.0 0.0 0.0 309.37 206.78 0.0 181.09 198.17 256.57 310.11 True False 159.83005678349542 0.0 0.0 0.0 263.86208281996085 228.66132235054488 0.0 206.76006206486588 153.2848114124624 198.6106588043962 233.10112839940552 0.6856683100634147 0.0 0.0 0.0 1.1319639876124845 0.9809533052055703 0.0 0.8869972594495307 0.6575893152684255 0.8520364537407478 1.0 7.864812178077996 -7.50294966468923 0.22452550600078958 1.0403852513817367 3.8486829033009706e-17 0.24721440612478696 0.3853409869836086 3.625585657647586 0.42472748209880057 0.4916388816883335 1.1976789806354828 3.14087270412451e-08 7.50294966468923 -1.0403852513817367 NNTAAET(ph)EDDES(ph)DGEDRGGGTSGSLR ddPTM_A549_PD325901_60min_R1 2 NNTAAETEDDESDGEDRGGGTSGSLR 26 1 Q6KC79 Q6KC79 NIPBL Nipped-B-like protein 2 NNT(0.016)AAET(0.984)EDDES(0.999)DGEDRGGGTSGSLR;NNT(0.018)AAET(0.982)EDDES(0.999)DGEDRGGGTSGSLR 67.809 0.00012853 11879200.0 481.36 451.72 502.33 468.26 551.4 695.31 426.72 709.7 366.34000000000003 470.57000000000005 681.6600000000001 True False 530.2273128414969 489.7880297114778 536.4211345556802 497.18335670438057 512.671566226732 689.6476258892956 442.95906311014386 695.5444767511208 350.9440037816664 440.8581298920216 597.8201413987637 0.886934507761624 0.8192899432352426 0.89729518530536 0.8316604314151814 0.8575682395497695 1.153603865329255 0.7409570746039437 1.1634677866886591 0.587039444607097 0.7374427513608248 1.0 9.223567694028281 -8.772814383408628 24.9993019430791 0.8049908970315484 0.9117568870715047 0.13949543433428369 0.15369463766585753 478.8142356684433 1052305.9928287275 0.03145618842747581 0.03363214502056745 1.6872740088349208e-09 8.772814383408628 0.10676599003995635 NNTAAET(ph)EDDES(ph)DGEDRGGGTSGSLRR ddPTM_A549_PD325901_60min_R1 1 NNTAAETEDDESDGEDRGGGTSGSLRR 27 2 Q6KC79 Q6KC79 NIPBL Nipped-B-like protein 2 NNT(0.018)AAET(0.974)EDDES(0.705)DGEDRGGGT(0.108)S(0.103)GS(0.092)LRR 44.021 0.021919 5440900.0 203.46 138.13 332.91 211.73 354.07 189.92 161.38 341.37 242.05 352.3 389.72 True False 224.11510942066442 149.77069986727716 355.50327455045766 224.80808122628127 329.2013446751888 188.37335448777526 167.52140421052448 334.56110755041567 231.87748025154886 330.0557178761059 341.78691063862675 0.6557158932795487 0.43819905094502165 1.0401313317885754 0.6577433898981935 0.9631771563752343 0.5511426816661902 0.490134054278181 0.9788587483508081 0.6784270346055301 0.9656768811286507 1.0 8.416953337173988 -10.94335443907517 0.620118713882111 1.0595328626096117 0.7117363137816309 0.22566862828362821 0.19044389557090705 1.505792775072139 0.7346758890631587 0.3045827716172338 0.03761417383389196 1.1393195795489948e-11 10.94335443907517 -0.3477965488279807 NNTAAET(ph)EDDES(ph)DGEDRGGGTSGVR ddPTM_A549_MK2206_60min_R1 1 NNTAAETEDDESDGEDRGGGTSGVR 25 1 A0A590UJS4;Q6KC79-2 A0A590UJS4 NIPBL Nipped-B-like protein 2 NNT(0.001)AAET(0.999)EDDES(0.998)DGEDRGGGT(0.001)S(0.001)GVR 73.975 3.7722e-06 16204000.0 366.03 167.15 124.11 151.36 490.12 289.37 220.73 143.84 365.59 494.31 357.3 True False 427.80691542568775 175.65722104462577 141.71066422808354 188.44320679480865 418.0239972580382 319.9909413317397 260.83378382460097 164.22976049152518 282.7844487272651 382.6450276867954 268.5725490216619 1.592891443984406 0.6540401157322225 0.5276438889391252 0.7016473108709618 1.5564658368131368 1.19145066201807 0.9711855689449602 0.6114912379905182 1.052916427078543 1.4247361805242906 1.0 8.069168043258653 NNTAAET(ph)EDDES(ph)DGEDRGGGTSGVR ddPTM_A549_PD325901_60min_R1 1 NNTAAETEDDESDGEDRGGGTSGVR 25 1 A0A590UJS4;Q6KC79-2 A0A590UJS4 NIPBL Nipped-B-like protein 2 NNT(0.166)AAET(0.838)EDDES(0.984)DGEDRGGGT(0.006)S(0.006)GVR 41.208999999999996 0.043706 39134000.0 0.0 0.0 155.83 0.0 150.71 167.04 0.0 0.0 0.0 187.12 0.0 True False 0.0 0.0 166.40556088191354 0.0 140.12464952127465 165.6796816219355 0.0 0.0 0.0 175.30521126590102 0.0 0.0 NNTAAETEDDES(ph)DGEDR ddPTM_A549_MK2206_60min_R1 2 NNTAAETEDDESDGEDR 17 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NNTAAET(0.004)EDDES(0.996)DGEDR;NNTAAET(0.019)EDDES(0.981)DGEDR 68.257 0.0017745999999999999 5060000.0 194.03 213.16 329.33000000000004 0.0 640.39 149.32 360.55 153.06 193.86 308.53999999999996 160.7 True False 226.77752042194965 224.00893352002652 376.0339460980965 0.0 546.1894793195034 165.12094328940597 426.0572679652063 174.756723726591 149.95101953080666 238.84059970966345 120.79375490562856 1.8773944116491954 1.8544744609937487 3.113024728735994 0.0 4.521669847470343 1.3669658950366144 3.5271464845021847 1.4467364133445606 1.2413805634898718 1.977259502333215 1.0 6.916402058348477 -8.504549905952121 23.397171067950747 1.1260942020119806 2.3075731386075744 0.11425065537064438 1.1438371083196817 361.403546920945 461340.21118831274 0.1631884257454316 0.19527208418611627 3.1293208521889564e-09 8.504549905952121 1.1814789365955938 NNTAAETEDDES(ph)DGEDR ddPTM_A549_PD325901_60min_R1 2 NNTAAETEDDESDGEDR 17 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NNTAAETEDDES(1)DGEDR;NNTAAETEDDES(1)DGEDR 96.303 2.414e-06 7715500.0 412.73 292.01 215.98 152.61 142.71 230.88 188.54 404.71 347.9 460.14 555.09 True False 454.63004576423293 316.61870750918405 230.63770159324702 162.03637309754302 132.68654192277285 228.99978982802006 195.7149928730467 396.63774156114715 333.278972854839 431.08668187201636 486.81744900542776 0.933881985317178 0.6503848786768814 0.4737663000051494 0.33284832626395117 0.27255913319017755 0.4704017703060328 0.40202953545090486 0.814756624626914 0.6846076974761912 0.8855201939715394 1.0 8.927237069294002 -9.509270219190977 0.6173453731305268 0.9688003791024331 0.5052427945743784 0.4168156014434713 0.1856327219645877 0.4600271758800917 0.38658674023331563 0.08757312833470414 0.05009725799886842 3.095492676061674e-10 9.509270219190977 -0.46355758452805473 NNTAAETEDDES(ph)DGEDRGGGTSGSLR ddPTM_A549_MK2206_60min_R1 2 NNTAAETEDDESDGEDRGGGTSGSLR 26 1 Q6KC79 Q6KC79 NIPBL Nipped-B-like protein 1 NNTAAETEDDES(1)DGEDRGGGTSGSLR;NNTAAET(0.005)EDDES(0.993)DGEDRGGGTSGS(0.001)LR 107.52 8.870299999999999e-13 9989300.0 803.85 837.37 625.43 810.99 1077.0 645.22 720.58 859.01 1265.47 1243.29 930.02 True False 939.5202277543893 879.9885563035498 714.1253785204277 1009.6825864067243 918.5747266932729 713.4967521376273 851.5000586614013 980.7772981077941 978.8430655403384 962.4299254975939 699.0703667537811 1.3439565921198557 1.2587982528710013 1.021535760178988 1.4443218228449723 1.3139946568737955 1.0206365282665848 1.2180462785390922 1.4029736414978562 1.4002067775890947 1.3767282540765606 1.0 9.449293870922338 -10.97178828174582 1.2623143576585798 1.0011756148096984 1.2767017535526175 0.0 0.1735756110657831 0.41514499340680716 1.1846872425068733 0.09705669701963927 0.022824397494616115 1.0671162128503128e-11 10.97178828174582 0.2755261387429191 NNTAAETEDDES(ph)DGEDRGGGTSGSLR ddPTM_A549_PD325901_60min_R1 3 NNTAAETEDDESDGEDRGGGTSGSLR 26 1 Q6KC79 Q6KC79 NIPBL Nipped-B-like protein 1 NNTAAET(0.004)EDDES(0.995)DGEDRGGGTSGSLR;NNTAAET(0.004)EDDES(0.993)DGEDRGGGT(0.001)S(0.001)GS(0.001)LR;NNTAAETEDDES(1)DGEDRGGGTSGSLR 92.49 3.5498000000000003e-09 13355900.0 1575.77 1518.3400000000001 1005.9099999999999 1348.94 1387.57 1508.95 1311.06 1311.17 1335.1299999999999 1488.1 1631.4499999999998 True False 1735.7410103794382 1646.2958404146943 1074.177101628221 1432.2609601349825 1290.1118700566312 1496.6616114907774 1360.9531057395607 1285.017685757033 1279.0191291396427 1394.1411120392654 1430.7919926136392 1.2131330195724301 1.1506185727300533 0.7507569983432834 1.0010266813966857 0.9016767473656137 1.046037173269899 0.9511886512961935 0.8981163526150862 0.8939238797410713 0.974384200663981 1.0 10.482598234129027 -5.592152285426245 9.338582899656538 0.9423104954611514 1.1976142141098547 0.6209094120144111 0.07479469951641747 0.12859530893108795 15.99479141296661 0.009882360353550529 0.03844992151624166 2.5576888756523548e-06 5.592152285426245 0.25530371864870327 NNTAAETEDDES(ph)DGEDRGGGTSGSLRR ddPTM_A549_PD325901_60min_R1 1 NNTAAETEDDESDGEDRGGGTSGSLRR 27 2 Q6KC79 Q6KC79 NIPBL Nipped-B-like protein 1 NNTAAETEDDES(0.981)DGEDRGGGT(0.006)S(0.006)GS(0.006)LRR 88.66799999999999 2.0101e-09 6320600.0 275.98 303.27 411.97 368.52 337.63 401.77 329.28 238.39 397.51 377.83 270.44 True False 303.9972864342621 328.82762722615735 439.9287615768587 391.2826434303553 313.91603356026786 398.49811832641893 341.8109305889298 233.6351244366629 380.8040370782616 353.9737493191287 237.17759446040796 1.2817285170881028 1.3864194380344326 1.8548495804492864 1.64974539150945 1.323548433292968 1.6801676365468838 1.4411602890507782 0.985064061249949 1.6055649689196474 1.4924417718479621 1.0 7.8898239185135814 -12.336398499843824 0.389486604418056 0.28432376223442746 1.5067722082296382 0.0 0.2682091668258972 6.0601658722069045 0.4659899296205456 3.7569502676097875 0.0625879302110556 4.608944730170017e-13 12.336398499843824 1.2224484459952107 NNTAAETEDDES(ph)DGEDRGGGTSGVR ddPTM_A549_MK2206_60min_R1 1 NNTAAETEDDESDGEDRGGGTSGVR 25 1 A0A590UJS4;Q6KC79-2 A0A590UJS4 NIPBL Nipped-B-like protein 1 NNTAAETEDDES(1)DGEDRGGGTSGVR 220.14 4.541799999999999e-82 14345000.0 797.45 927.67 1111.5 818.19 1232.3 1005.9 833.15 892.36 1783.6 1940.5 1080.9 True False 932.0400642193667 974.8844406010647 1269.1274135002407 1018.6465867299444 1051.0303024179393 1112.3436703376199 984.5225705317192 1018.8547627378858 1379.6174478239284 1502.1397022642202 812.4826986776219 1.1471506602372379 1.1998833232852395 1.5620362323602006 1.2537455731523515 1.2936033027270266 1.3690675163274797 1.2117458896467648 1.2540017952334865 1.6980268626881063 1.8488266946595517 1.0 9.666193281821329 -7.126533043124457 15.544894013635679 1.3239499310016516 1.2991465190905618 0.0 0.24197158278919687 17.422177185249474 2084.972830033149 0.03879093996548035 0.06719058125930709 7.472517776714126e-08 7.126533043124457 -0.024803411911089812 NNTAAETEDDES(ph)DGEDRGGGTSGVR ddPTM_A549_PD325901_60min_R1 2 NNTAAETEDDESDGEDRGGGTSGVR 25 1 A0A590UJS4;Q6KC79-2 A0A590UJS4 NIPBL Nipped-B-like protein 1 NNTAAETEDDES(1)DGEDRGGGTSGVR;NNTAAETEDDES(1)DGEDRGGGTSGVR 96.242 2.7526999999999994e-09 37398000.0 596.18 384.0 557.22 439.04 602.74 691.02 544.1600000000001 453.12 597.43 538.06 551.46 True False 656.7037547154804 416.36102764811716 595.0363000360643 466.1585036678152 560.405621740117 685.3925622269512 564.868306575778 444.0821661342368 572.3220947187884 504.086799774106 483.6339159929619 1.35785298135509 0.8609012186278853 1.2303444410311448 0.9638664457821006 1.158739292693179 1.4171722444646033 1.1679666952555046 0.9182196521980467 1.1833787412194583 1.0422900113180684 1.0 8.917771610373197 -10.977723031870271 0.9410894008607074 0.9894169926729732 1.13717715903395 0.07074172873937035 0.1637761063680245 1.4269485803395137 1.9591089137303836 0.15865467264621755 0.027157779195288178 1.0526329687851986e-11 10.977723031870271 0.14776016636097666 NNTVTPGGKPNK ddPTM_A549_MK2206_60min_R1 1 NNTVTPGGKPNK 12 1 C9K025;P18077 C9K025 RPL35A 60S ribosomal protein L35a 0 49.423 0.031559 5448900.0 1518.6 1575.2 1475.0 1433.6 1930.9 1668.1 1626.4 1349.5 2514.3 2061.5 1825.5 False True 1774.9025537946327 1655.3709517768139 1684.1771794087765 1784.83206435675 1646.867167847764 1844.617234804835 1921.8958275374046 1540.7957576704202 1944.815064512057 1595.8057182260707 1372.1779687630678 1.2934929682587717 1.2063821089250009 1.2273751785469609 1.3007292821977485 1.200184819562663 1.3442988277006382 1.4006170273014023 1.1228833232611588 1.4173198439158627 1.1629728464920546 1.0 10.42225189299563 -10.98028045992139 1.223039307433663 0.9983911951123439 1.2889476155562898 0.34803645412445083 0.09574634472358336 0.25977649783532963 0.6848603206960316 0.06365412514214817 0.01429913607459156 1.046452548707272e-11 10.98028045992139 0.2905564204439459 NNTVTPGGKPNK ddPTM_A549_PD325901_60min_R1 2 NNTVTPGGKPNK 12 1 C9K025;P18077 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 70.089 0.006905199999999999 10175000.0 1272.0 1357.5 1749.3 1472.8 1433.6 1536.9 1222.6 1545.8 1480.7 1299.3 1343.2 False True 1401.1325036030914 1471.9012891466639 1868.0180173954386 1563.7715110285126 1332.9088816515114 1524.3839959575705 1269.126712032391 1514.9678063433591 1418.4713282729538 1217.261976260075 1177.9949152463396 1.189421520813687 1.2494971498572753 1.585760679624668 1.3274857902943498 1.1315064813949358 1.2940497248570846 1.077361791300257 1.2860563205627695 1.2041404507899138 1.0333338119761952 1.0 10.202117596525943 -11.745827083168201 0.16460670574133138 0.6638153146210108 1.3741638611606009 0.41371543367290775 0.1196278579795132 12.670097127480835 0.37241902449050734 1.9512255859226793 0.2474621654241906 1.7954483525671666e-12 11.745827083168201 0.71034854653959 NNVGERDDDVPADMVAEES(ph)GPGAQNSPYQLR ddPTM_A549_MK2206_60min_R1 1 NNVGERDDDVPADMVAEESGPGAQNSPYQLR 31 1 Q86XK2-4;Q86XK2;Q86XK2-5 Q86XK2-4 FBXO11 F-box only protein 11 1 NNVGERDDDVPADMVAEES(0.496)GPGAQNS(0.44)PY(0.064)QLR 44.318999999999996 0.0076101 2603000.0 158.95 0.0 0.0 0.0 0.0 269.08 0.0 0.0 197.8 382.24 241.78 True False 185.77687404560584 0.0 0.0 0.0 0.0 297.55386699915186 0.0 0.0 152.9986158216938 295.89171852279065 181.73935321146777 1.0222159964960373 0.0 0.0 0.0 0.0 1.63725611289551 0.0 0.0 0.8418573804632621 1.6281103310547045 1.0 7.505727039372549 -8.883993216774599 6.6191897261152315 0.9307056976314115 0.32143205309639256 0.28576043276166174 0.550633698704273 0.2337269716285349 12.715587172774269 0.08728988971884732 0.0925784837935676 1.306191289313779e-09 8.883993216774599 -0.609273644535019 NNVGERDDDVPADMVAEESGPGAQNS(ph)PYQLR ddPTM_A549_MK2206_60min_R1 3 NNVGERDDDVPADMVAEESGPGAQNSPYQLR 31 1 Q86XK2-4;Q86XK2;Q86XK2-5 Q86XK2-4 FBXO11 F-box only protein 11 1 NNVGERDDDVPADMVAEES(0.06)GPGAQNS(0.939)PY(0.001)QLR;NNVGERDDDVPADMVAEES(0.234)GPGAQNS(0.765)PY(0.002)QLR;NNVGERDDDVPADMVAEES(0.002)GPGAQNS(0.988)PY(0.01)QLR 118.31 2.1984000000000003e-21 13311600.0 1248.9299999999998 1401.74 1108.55 1354.25 2666.26 1742.18 1402.16 1642.47 2498.54 2268.31 2030.35 True False 1459.7188505931322 1473.0825786843775 1265.7590591414232 1686.0413107945938 2274.0566859732653 1926.5363312345123 1656.9143221469794 1875.2951523534155 1932.6246793485068 1755.897195590286 1526.1580601906844 0.9564663639169516 0.9652228147983077 0.829376125683387 1.1047619213071107 1.4900531899619462 1.2623439088568604 1.085676749589068 1.2287686323388474 1.2663332388435813 1.1505343000782613 1.0 10.575688670716891 -6.423921710616722 6.142907176622448 1.1693535040068803 0.9249582727835428 0.49566151286085947 0.1252787491629685 0.20709072684010257 10.753084420790461 0.021346835690015595 0.049981132670850664 3.7677171273301895e-07 6.423921710616722 -0.2443952312233375 NNVGERDDDVPADMVAEESGPGAQNS(ph)PYQLR ddPTM_A549_PD325901_60min_R1 3 NNVGERDDDVPADMVAEESGPGAQNSPYQLR 31 1 Q86XK2-4;Q86XK2;Q86XK2-5 Q86XK2-4 FBXO11 F-box only protein 11 1 NNVGERDDDVPADMVAEES(0.198)GPGAQNS(0.793)PY(0.009)QLR;NNVGERDDDVPADMVAEES(0.001)GPGAQNS(0.999)PYQLR;NNVGERDDDVPADMVAEES(0.089)GPGAQNS(0.911)PYQLR 118.42 2.1688000000000003e-21 19059200.0 2666.5499999999997 2352.04 3038.41 2641.78 3906.7000000000003 3142.07 2747.35 3400.82 3538.53 3317.87 3353.17 True False 2937.2561929896406 2550.2546652850983 3244.6147740436054 2804.9567506823073 3632.30686938334 3116.4820236699893 2851.901907657607 3332.9879772083195 3389.817889669546 3108.379121968764 2940.751347495956 0.9988114756763466 0.8672119346154972 1.1033285003189366 0.9538231625977907 1.235162868318072 1.059757067296311 0.9697868233864777 1.1333797330557553 1.1527046965585748 1.0570016824494675 1.0 11.521969088302198 -5.770740134461275 24.949811449191635 1.0744384826334732 0.9330116968125911 0.29801021491631274 0.08338660168120457 158.40010909694092 424922.17390693026 0.011919197143220522 0.03779821433300569 1.6953519320548786e-06 5.770740134461275 -0.14142678582088208 NNVPTT(ph)TPR ddPTM_A549_MK2206_60min_R1 1 NNVPTTTPR 9 0 A0A3B3IU83;R4GMY9;A0A3B3IS14;A0A3B3ITJ8;A0A3B3IS61;A0A3B3IRX5;A0A3B3IRM3;A0A3B3ISW5;A0A3B3IRT9;A0A3B3IS77;A0A3B3ITL3;A0A3B3ISP2;A0A3B3ISN3;A0A3B3IRX0;A0A3B3IUE2;A0A3B3IRF0;A0A3B3ISN1;A0A3B3ISB6;A0A2R8YF72;Q9UL68-4;Q9UL68 A0A3B3IU83 MYT1L Myelin transcription factor 1-like protein 1 NNVPT(0.017)T(0.967)T(0.016)PR 60.398 0.0085881 14155000.0 1845.2 1885.2 1715.6 2180.6 3226.2 2084.0 2198.1 1901.1 3183.7 3219.2 3431.6 True False 2156.6246491912666 1981.1486276597573 1958.897877283863 2714.8470978908526 2751.630253721298 2304.527496752758 2597.4663173327394 2170.5867468745737 2462.597033324199 2491.9804841685004 2579.439012658088 0.8360828221206459 0.7680540683217015 0.7594278708164676 1.052495168355707 1.0667553061802257 0.8934219748727317 1.0069888470268868 0.8414956648414045 0.9547025617738935 0.9660939731234575 1.0 11.332841620985633 -6.251710374712755 24.978681240325265 0.9745853356881004 0.785874821594428 0.625838978121287 0.06365160258751536 324.8659424099967 834073.2176322351 0.008780462015959434 0.02292082680739964 5.601310209897895e-07 6.251710374712755 -0.18871051409367234 NNYYSSRFS(ph)PDSQYIDNR ddPTM_A549_MK2206_60min_R1 2 NNYYSSRFSPDSQYIDNR 18 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NNYYSSRFS(0.999)PDS(0.001)QYIDNR;NNYYSSRFS(0.999)PDS(0.001)QYIDNR 186.92 2.2294999999999997e-40 48951000.0 5657.7 8052.8 6823.4 6048.8 8887.4 8062.0 7030.799999999999 6736.0 10434.3 9857.4 10358.5 True False 6612.581442515407 8462.653123710212 7791.0607226968405 7530.756271540954 7580.075233067594 8915.115488877515 8308.205351850702 7690.848628134825 8070.9477101531875 7630.60649373837 7786.198569943701 0.8492695611490447 1.0868786671300372 1.000624457841585 0.9671929381060476 0.9735270896285917 1.144989484764961 1.0670425724720216 0.987753980205829 1.0365710092866982 0.9800169396133888 1.0 12.926703422594143 -5.247886522324942 24.61810354809906 1.023178691047475 0.8492694189209854 0.4754686617313544 0.052882745596495806 1247.251822125902 2265525.0562281194 0.006903079558341094 0.19119806757189173 5.65084607612802e-06 5.247886522324942 -0.17390927212648954 NNYYSSRFS(ph)PDSQYIDNR ddPTM_A549_PD325901_60min_R1 4 NNYYSSRFSPDSQYIDNR 18 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NNYYSSRFS(1)PDSQYIDNR;NNYYSSRFS(1)PDSQYIDNR;NNYYS(0.003)S(0.013)RFS(0.934)PDS(0.05)QYIDNR;NNY(0.003)Y(0.01)S(0.14)S(0.113)RFS(0.666)PDS(0.052)QY(0.017)IDNR 229.97 6.870999999999999e-65 102426300.0 12534.7 12552.599999999999 12776.099999999999 14299.8 14274.5 14647.599999999999 13424.3 15492.6 15297.5 15127.300000000001 16624.5 True False 13807.213516441574 13610.451655353525 13643.16297493047 15183.066168797875 13271.908364351622 14528.314801996297 13935.169082558828 15183.587939290413 14654.599273489235 14172.159696358833 14579.791891388306 0.9470103290429637 0.9335148098645132 0.9357584166197143 1.0413774271885115 0.910294773973475 0.9964692850367491 0.9557865562395146 1.0414132144272064 1.005130895053798 0.9720412885131615 1.0 13.83168250666253 -8.231206098583932 24.64897369356828 1.0054148959583917 0.9606942066600872 0.26087396788138684 0.03610674495598396 551.0075386382397 449232.96693797904 0.005183431822381248 0.006691379783873531 5.872106200033123e-09 8.231206098583932 -0.04472068929830453 NPARS(ph)PVTEIR ddPTM_A549_MK2206_60min_R1 2 NPARSPVTEIR 11 1 Q86YC2 Q86YC2 PALB2 Partner and localizer of BRCA2 1 NPARS(0.999)PVT(0.001)EIR;NPARS(1)PVTEIR 110.25 2.4256e-05 30857000.0 2305.5 2836.7 2546.2 2733.6 3454.3999999999996 2835.7 2715.5 2733.8 3721.3 3832.3 3803.4 True False 2694.6120359367364 2981.0759134746636 2907.2894469224575 3403.3321227159668 2946.262336016009 3135.7718918146816 3208.871199998662 3121.3245219113724 2878.431491694991 2966.5807683520566 2858.910811500111 0.9425309894584768 1.042731344217923 1.0169220513028043 1.1904296241162522 1.0305541271747696 1.0968414541653007 1.1224103903804268 1.0917880016948025 1.006828013002839 1.037661180761162 1.0 11.481249898050637 -8.777412048821398 21.65194703954005 1.0032242736208266 1.070083742744428 0.11623991752801754 0.06106937843598441 56.30263215210761 76320.84530031319 0.010207658753551091 0.010893830324675665 1.6695058730815439e-09 8.777412048821398 0.06685946912360152 NPARS(ph)PVTEIR ddPTM_A549_PD325901_60min_R1 1 NPARSPVTEIR 11 1 Q86YC2 Q86YC2 PALB2 Partner and localizer of BRCA2 1 NPARS(0.998)PVT(0.002)EIR 97.20299999999999 7.799800000000001e-05 17448000.0 4813.2 4510.2 4035.4 4066.7 4626.8 3618.1 4119.8 3434.3 4434.4 4616.4 4672.2 True False 5301.832520709432 4890.290382548278 4309.266510831509 4317.890822854192 4301.829529593479 3588.6353931772296 4276.581243441063 3365.800192343768 4248.037589041387 4324.91971616025 4097.549019516039 1.2939033786923753 1.1934672066780716 1.051669300429864 1.0537740493862786 1.0498543175699622 0.8758004787947803 1.0436925154701795 0.8214179199108891 1.0367264842491433 1.055489439067422 1.0 12.000545493239946 -5.464604500981529 1.0460183563475445 0.9966608206443346 1.3939519903597395 0.6538892863776979 0.07203778807366035 0.6019004815218642 0.6426128323872621 0.010250274884516566 0.24384679935458098 3.43080077111325e-06 5.464604500981529 0.3972911697154049 NPDDITNEEYGEFYK ddPTM_A549_PD325901_60min_R1 1 NPDDITNEEYGEFYK 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 216.46 2.7328999999999997e-45 6541100.0 3738.8 4110.8 3934.0 3039.8 4070.3 3808.3 3717.1 4250.6 3991.9 3672.4 4714.5 False True 4118.360223640913 4457.231542853854 4200.984897063775 3227.5615421133043 3784.416169772702 3777.286467437842 3858.556274575166 4165.818448468806 3824.134325206189 3440.524037264297 4134.646387677836 0.9960610503269496 1.0780200106440525 1.0160445424265645 0.7806136824015117 0.9152937917619998 0.9135694115692684 0.9332252175360195 1.0075392325892414 0.924899971277582 0.8321205043115228 1.0 12.013548233996183 -6.0191783978791165 24.7522609323587 0.9459518863629219 1.0395385095687968 0.2885874297682052 0.06939564767960534 625.8545536268485 807750.3163071186 0.00895795790977191 0.024121603286431925 9.568009594047065e-07 6.0191783978791165 0.09358662320587485 NPDDITQEEYGEFYK ddPTM_A549_PD325901_60min_R1 2 NPDDITQEEYGEFYK 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 240.7 3.7789e-64 17437500.0 8058.0 7568.5 7353.4 8256.6 8247.2 8836.8 8630.3 8669.2 9156.5 8646.5 10054.6 False True 8876.04222801393 8206.324056653059 7852.44594358636 8766.591429900884 7667.945123295442 8764.8360306317 8958.730789181363 8496.28600514417 8771.684147586473 8100.5585143790795 8817.947941360813 1.0065881866211326 0.9306387507870264 0.8905071787455513 0.9941759112435853 0.8695838503796044 0.9939768400672917 1.0159654886552691 0.9635219057363811 0.9947534512471616 0.9186444021043944 1.0 13.106227244382556 -7.465384279598959 24.99961710902217 0.9960324154500046 0.9376681713390539 0.14153229519125377 0.045038047197650234 215.45614988606843 93684.07785286606 0.005189651533724388 0.008296219283472529 3.4246462724906185e-08 7.465384279598959 -0.05836424411095076 NPDEIDETT(ph)ELSS ddPTM_A549_PD325901_60min_R1 1 NPDEIDETTELSS 13 0 P17301 P17301 ITGA2 Integrin alpha-2 1 NPDEIDET(0.022)T(0.347)ELS(0.315)S(0.315) 61.038000000000004 0.0082541 1135800.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NPDEIDETTELS(ph)S ddPTM_A549_MK2206_60min_R1 2 NPDEIDETTELSS 13 0 P17301 P17301 ITGA2 Integrin alpha-2 1 NPDEIDET(0.002)T(0.007)ELS(0.495)S(0.495);NPDEIDET(0.005)T(0.006)ELS(0.495)S(0.495) 70.41199999999999 0.0027935 1440880.0 0.0 0.0 0.0 138.82 115.54 138.47 0.0 0.0 0.0 0.0 218.20999999999998 True False 0.0 0.0 0.0 172.8309062318666 98.54421905491253 153.12280349105302 0.0 0.0 0.0 0.0 164.02243471037463 0.0 0.0 0.0 1.0537028458152429 0.600797197218287 0.9335479244740646 0.0 0.0 0.0 0.0 1.0 7.357749347494831 -10.92717147605307 1.2042997213596796 0.9970030005807454 0.27856928233704426 0.0 0.47947021049714356 0.4843186649158533 1.2565479935748585 0.28395691710787274 0.06812137306580976 1.1825745379268136e-11 10.92717147605307 -0.7184337182437012 NPDEIDETTELS(ph)S ddPTM_A549_PD325901_60min_R1 1 NPDEIDETTELSS 13 0 P17301 P17301 ITGA2 Integrin alpha-2 1 NPDEIDETT(0.003)ELS(0.498)S(0.498) 83.04700000000001 0.00048399 1478300.0 0.0 0.0 0.0 0.0 0.0 110.2 0.0 167.99 110.93 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 109.30256773669356 0.0 164.63930766439444 106.26799786946629 0.0 0.0 0.0 NPDVDT(ph)SFLPDRDREEEENR ddPTM_A549_MK2206_60min_R1 4 NPDVDTSFLPDRDREEEENR 20 2 B0S8I6;Q9Y247;Q14320 B0S8I6 FAM50A;FAM50B Protein FAM50B;Protein FAM50A 1 NPDVDT(0.5)S(0.5)FLPDRDREEEENR;NPDVDT(0.5)S(0.5)FLPDRDREEEENR;NPDVDT(0.5)S(0.5)FLPDRDREEEENR;NPDVDT(0.5)S(0.5)FLPDRDREEEENR 65.21300000000001 0.0005889 20238100.0 2548.46 2699.3500000000004 1994.55 2307.15 3154.53 3109.0 2160.9300000000003 2849.1800000000003 4401.460000000001 3181.6000000000004 3792.33 True False 2978.57774413504 2836.735385143945 2277.4071818235757 2872.401853571898 2690.5028157806223 3437.992316412823 2553.5430094690128 3253.0599902478 3404.5363376873224 2462.8743502828343 2850.5897980165673 1.0448987596207375 0.995139808301334 0.7989249043858185 1.0076517693182327 0.9438407510097268 1.206063502649511 0.895794621606294 1.1411883928411133 1.1943269915777392 0.8639876393287086 1.0 11.477044733988746 -7.222953307516987 24.42294015539609 1.0888335201987385 0.9540602030094225 0.08099136587741151 0.1207199981840578 448.5973924095028 284676.1077433381 0.015953592750614906 0.02763205933058532 5.984759357933675e-08 7.222953307516987 -0.13477331718931596 NPDVDT(ph)SFLPDRDREEEENR ddPTM_A549_PD325901_60min_R1 1 NPDVDTSFLPDRDREEEENR 20 2 B0S8I6;Q9Y247;Q14320 B0S8I6 FAM50A;FAM50B Protein FAM50B;Protein FAM50A 1 NPDVDT(0.5)S(0.5)FLPDRDREEEENR 99.064 1.6032e-07 22575000.0 1026.2 1325.6 1251.8 981.54 1386.7 1225.1 1243.7 1052.8 1497.5 1216.0 1085.9 True False 1130.3790685514875 1437.3129641936036 1336.7546756849088 1042.1674965609225 1289.3029758552946 1215.1231917806103 1291.029684078754 1031.8010780943778 1434.5652826965265 1139.2215524761416 952.3411840872548 1.1869475850032343 1.509241633366047 1.403651021315522 1.0943215666555042 1.3538246559094171 1.2759326301163922 1.3556377752539452 1.0834363727357639 1.5063564473182436 1.1962325808349843 1.0 9.895334713316789 -11.041013103357091 1.3271902471204717 0.9993071953290821 1.328629987195328 0.1832666718310677 0.1483147683281444 0.34231463424635356 1.0710465527094086 0.10105640018602682 0.02240740160890342 9.09885819511926e-12 11.041013103357091 0.3293227918662459 NPEAALS(ph)PTFR ddPTM_A549_MK2206_60min_R1 2 NPEAALSPTFR 11 0 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 NPEAALS(0.976)PT(0.024)FR;NPEAALS(0.95)PT(0.05)FR 137.62 2.7159e-08 26022000.0 2416.06 2634.2200000000003 3081.3 2859.8999999999996 3735.2 2896.64 3360.6000000000004 3857.5 4343.2 3913.7 3810.6000000000004 True False 2823.8318610042543 2768.2905463366683 3518.2746731608577 3560.575628385789 3185.757027989521 3203.1605221659834 3971.1775196890094 4404.3124380982945 3359.47213466522 3029.592451817301 2864.322852790218 0.9858636774319905 0.9664729461764403 1.2283093959654747 1.243077617775291 1.1122199527494552 1.1182959068478242 1.3864280403379015 1.537645253155708 1.172867832057641 1.057699361252552 1.0 11.483978400123284 -5.748819114439824 24.74385088280971 1.156453603445139 0.9761681714723526 0.20526754422580396 0.15044252848453013 311.51566399744456 610758.135958015 0.02407825502684679 0.09196401855890311 1.7831212906585714e-06 5.748819114439824 -0.18028543197278635 NPEAALS(ph)PTFR ddPTM_A549_PD325901_60min_R1 2 NPEAALSPTFR 11 0 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 NPEAALS(0.998)PT(0.002)FR;NPEAALS(1)PTFR 173.66 3.1636999999999997e-15 64670000.0 12093.8 11346.4 12071.0 11984.5 14926.5 13216.2 12453.4 12387.9 12592.9 11715.5 14492.7 True False 13321.55367301499 12302.600948194267 12890.210648819737 12724.755346225696 13878.11413362953 13108.571649017143 12927.320951761969 12140.813616380447 12063.664205989371 10975.781330620266 12710.189776794688 1.0481002964516302 0.9679321209393297 1.014163507798579 1.0011459757632888 1.0918888212800055 1.031343503064745 1.0170832362679354 0.9552031739562405 0.9491332873734352 0.8635418922429486 1.0 13.633697951040753 -8.158498366072783 5.750359527215303 0.9738083884242111 1.0243820773039625 0.3687168452067193 0.045544503172915106 0.21020540564847565 9.851713340517035 0.00553021105516185 0.007165024280526033 6.942272135700206e-09 8.158498366072783 0.05057368887975133 NPEDKS(ph)PQLSLSPR ddPTM_A549_MK2206_60min_R1 1 NPEDKSPQLSLSPR 14 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 NPEDKS(0.688)PQLS(0.156)LS(0.156)PR 48.31399999999999 0.0083463 5118300.0 1395.8 1810.9 1457.9 1379.5 1766.6 1442.8 1072.9 1170.8 2243.1 1967.1 2025.6 True False 1631.3769159663834 1903.0670750207162 1664.6521422780038 1717.4775619281088 1506.7354802008683 1595.4761383468724 1267.8320421574533 1336.7644854246223 1735.0414314946484 1522.7307437897175 1522.587616284014 1.0714502722331851 1.2498900258136145 1.0933046640302437 1.1279991663926296 0.9895886871050258 1.0478714796333022 0.8326824864448128 0.8779557058838383 1.1395347058773164 1.000094002804287 1.0 10.572309534101723 -6.671121062027658 5.996293359461145 1.0292066418206902 1.1428286731939028 0.3141955617518829 0.09361320122516587 0.27426943884612354 14.78548995951122 0.015387947318877226 0.03224066412779275 2.1324503977549735e-07 6.671121062027658 0.11362203137321258 NPEDKSPQLS(ph)LSPRPAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 NPEDKSPQLSLSPRPASPK 19 2 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 2 NPEDKS(0.018)PQLS(0.493)LS(0.493)PRPAS(0.997)PK 47.018 0.006501399999999999 8226200.0 2058.2 3120.9 2450.4 2301.5 4431.6 2495.5 2786.6 3063.2 4419.7 3951.4 3797.7 True False 2405.5738418412466 3279.740479558315 2797.903566388656 2865.3676033182605 3779.7175105050237 2759.5721536211668 3292.8891496653546 3497.417980656561 3418.6450068106165 3058.7759956335135 2854.626278812107 0.8426930907545193 1.1489211403613613 0.9801295487102939 1.003762777840966 1.3240673704152524 0.9667017269838576 1.1535272319554284 1.2251754307088978 1.1975805842553982 1.0715153918173692 1.0 11.47908616825508 -4.746470357166999 2.0059365627580235 1.104311934962465 4.856897685011331e-14 0.31043243532613585 0.11082624875611528 6.156451647281276 6.055381621574668 0.016202335325209337 21.125913546628034 1.792790915394099e-05 4.746470357166999 -1.1043119349624164 NPEDKSPQLSLS(ph)PRPAS(ph)PK ddPTM_A549_PD325901_60min_R1 1 NPEDKSPQLSLSPRPASPK 19 2 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 2 NPEDKS(0.072)PQLS(0.1)LS(0.842)PRPAS(0.985)PK 65.423 0.0016462 6583300.0 3191.7 2848.7 2566.3 3788.2 2985.6 2817.6 3127.1 3309.2 3797.0 3362.2 3677.1 True False 3515.7190343946463 3088.76994651352 2740.464550415549 4022.18851037358 2775.901755760847 2794.6543997723033 3246.1035017147797 3243.1954099828226 3637.4252944231807 3149.9101182033573 3224.840011057411 1.0901995207017594 0.9578056387053836 0.8497986073786534 1.2472521106728398 0.8607874332502594 0.8666024950663981 1.0065936575409817 1.0056918789342957 1.1279397681593775 0.9767647720205863 1.0 11.65501187280123 -8.536841729152146 23.347534280396754 1.0607528530916053 0.9797017818964042 0.02502826621094756 0.11443991555565111 193.2859044641301 323191.22059765185 0.018892516988413856 0.021429026142924735 2.9050811663902708e-09 8.536841729152146 -0.08105107119520105 NPEDKSPQLSLS(ph)PRPASPK ddPTM_A549_MK2206_60min_R1 1 NPEDKSPQLSLSPRPASPK 19 2 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 NPEDKS(0.021)PQLS(0.116)LS(0.831)PRPAS(0.032)PK 73.036 0.00012158 17986000.0 1449.3 1630.8 1833.3 1673.1 2170.4 1493.2 1833.6 1381.6 2924.5 2607.0 2511.2 True False 1693.9064080169649 1713.800754290013 2093.289507125497 2083.0095751083136 1851.1370351114956 1651.2094328940589 2166.741385497162 1577.4460309725484 2262.105419466854 2018.076889359866 1887.5997344058135 0.8973864411726991 0.9079259352775287 1.108968956167199 1.103522922333962 0.9806830343161731 0.874766722413125 1.1478818024835216 0.8356888392279328 1.1984031244732767 1.0691233170760774 1.0 10.882337158255497 -8.779410428761246 24.999414649794684 1.0936903407340368 0.9898074001885813 0.16399346275757398 0.10650686192854827 347.3212050192913 483154.44396794646 0.020041285819909646 0.021356830828875295 1.6618413895647352e-09 8.779410428761246 -0.10388294054545555 NPEDKSPQLSLSPRPAS(ph)PK ddPTM_A549_MK2206_60min_R1 3 NPEDKSPQLSLSPRPASPK 19 2 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 NPEDKSPQLS(0.001)LS(0.005)PRPAS(0.994)PK;NPEDKS(0.006)PQLS(0.137)LS(0.137)PRPAS(0.72)PK;NPEDKS(0.002)PQLS(0.019)LS(0.065)PRPAS(0.914)PK 119.83 8.3239e-15 31691600.0 6022.9 6790.1 8117.9 6919.799999999999 10340.6 6911.6 6129.4 5828.700000000001 10702.699999999999 10148.2 11375.0 True False 7039.418274232646 7135.687087137978 9269.140287947464 8615.151310641624 8819.511438109994 7642.98092445123 7243.032639761295 6654.936074645115 8278.555538699911 7855.714571769001 8550.273565970907 0.8232974325229442 0.83455658255628 1.084075289103914 1.007587797533043 1.0314888020905697 0.8938872967608199 0.8471112162525094 0.7783301929813082 0.9682211305668158 0.918767629030471 1.0 13.061754864421529 -8.981546934371742 24.89364079732501 0.9859800040426743 0.9170707036762025 0.039586458883075326 0.09252625024901169 208.1180207542694 280760.7738321189 0.017238695923973566 0.01750162954023425 1.0434053654160672e-09 8.981546934371742 -0.0689093003664718 NPEDKSPQLSLSPRPAS(ph)PK ddPTM_A549_PD325901_60min_R1 4 NPEDKSPQLSLSPRPASPK 19 2 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 NPEDKSPQLS(0.002)LS(0.012)PRPAS(0.986)PK;NPEDKS(0.054)PQLS(0.054)LS(0.054)PRPAS(0.838)PK;NPEDKSPQLSLS(0.01)PRPAS(0.99)PK;NPEDKS(0.002)PQLS(0.002)LS(0.006)PRPAS(0.99)PK 140.66 3.4299e-21 113094000.0 8067.0 7823.6 9295.4 8883.0 10395.3 13131.1 10269.1 12988.9 11553.3 10677.800000000001 11973.7 True False 8885.955901388475 8482.922228926589 9926.24174178104 9431.68273524326 9665.169989838134 13024.164675202324 10659.896219967142 12729.826199905066 11067.754978682997 10003.601885715256 10501.010807538038 0.8462000529520252 0.8078195884568764 0.9452653581363418 0.8981690342107664 0.9204037751204004 1.2402772374877538 1.0151304874684113 1.2122477000754153 1.0539704397540595 0.9526322816975179 1.0 13.35824058523458 -7.021419104467446 23.941101152090482 1.0552498757818538 0.8790011959201239 0.5465346263627042 0.08789386394895182 283.959518079891 317394.6848572442 0.01253449240939982 0.0218658594872655 9.518771366578272e-08 7.021419104467446 -0.17624867986172987 NPEPDS(ph)DEHT(ph)PVEDEEPKK ddPTM_A549_PD325901_60min_R1 2 NPEPDSDEHTPVEDEEPKK 19 1 Q8N5F7;A0A494C050 Q8N5F7 NKAP NF-kappa-B-activating protein 2 NPEPDS(1)DEHT(1)PVEDEEPKK;NPEPDS(1)DEHT(1)PVEDEEPKK 109.06 2.4296e-10 25619000.0 6150.1 6186.8 5758.0 7327.6 8664.4 8167.8 7394.4 6677.9 8895.6 8859.1 8267.8 True False 6774.453624535676 6708.183348576487 6148.772505666809 7780.209209812965 8055.842434557304 8101.284144825459 7675.797938370939 6544.704045788791 8521.748867282291 8299.734914096536 7250.9130139023855 0.9342897386228216 0.9251501618781929 0.8479997613924741 1.0729971790994797 1.1110107677628465 1.1172778006428477 1.058597437819749 0.9026041318162885 1.1752656321960138 1.1446468738741196 1.0 12.823946951196103 -6.274300346981486 23.93867205321788 1.073780961894541 0.904746920496052 0.5213604274342157 0.07266658339383665 281.3834744863933 523751.62567991496 0.011537153678951745 0.02698732643508716 5.317403939906469e-07 6.274300346981486 -0.1690340413984891 NPFRGS(ph)PK ddPTM_A549_MK2206_60min_R1 4 NPFRGSPK 8 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966-3 ZNF638 Zinc finger protein 638 1 NPFRGS(1)PK;NPFRGS(1)PK;NPFRGS(1)PK;NPFRGS(1)PK 84.68700000000001 0.00086931 309140000.0 20180.8 23718.699999999997 23578.5 22356.4 28626.4 22704.8 22353.9 22676.0 30859.0 31806.800000000003 29932.1 True False 23586.82566681071 24925.880519241175 26922.28584724736 27833.719003616938 24415.49448116277 25107.406865773533 26415.314276431625 25890.392442337492 23869.485771696924 24621.62178921802 22499.133486065748 1.0483437365007233 1.1078595775556588 1.1965921204885945 1.237101820870347 1.0851748800141068 1.115927725897673 1.1740591828921438 1.1507284250912166 1.060906891657844 1.0943364465332313 1.0 14.457581819239385 -9.066161050306963 1.4464285835911168 1.0189170467401587 1.1427038448216282 0.2849675921547117 0.056026604828175716 0.21755185919932366 0.9300486390471576 0.011431704897605362 0.010860213596931742 8.586950308291566e-10 9.066161050306963 0.12378679808146953 NPFRGS(ph)PK ddPTM_A549_PD325901_60min_R1 4 NPFRGSPK 8 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966-3 ZNF638 Zinc finger protein 638 1 NPFRGS(1)PK;NPFRGS(1)PK;NPFRGS(1)PK;NPFRGS(1)PK 73.887 0.0016144000000000002 581154000.0 26796.9 24611.2 25440.4 26640.8 31699.7 28510.3 26354.0 30527.7 28248.3 28870.4 29478.499999999996 True False 29517.301561164863 26685.272197013917 27166.93852955292 28286.34171035333 29473.22243002819 28278.12156935985 27356.915891462133 29918.801074982628 27061.1221871094 27047.518016946728 25852.83137960781 1.1417434758982534 1.0321992127354653 1.0508302990357046 1.094129354538127 1.1400384738236473 1.0938113955156594 1.0581787151190223 1.1572736709442963 1.0467372718198542 1.046211055949611 1.0 14.65803467144858 -9.219838687132917 1.9230362122882163 1.0152401325547826 1.0922920303146786 0.3208799043542485 0.04006967732919827 0.20723806204329992 1.583439738317402 0.0081042908512558 0.007433224687568934 6.027834403314052e-10 9.219838687132917 0.07705189775989596 NPFRGSPK ddPTM_A549_PD325901_60min_R1 1 NPFRGSPK 8 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966-3 ZNF638 Zinc finger protein 638 0 48.79600000000001 0.035094 3834600.0 1713.9 1654.5 1754.0 1652.8 1964.7 2137.4 1636.1 1842.7 1956.9 2193.5 2309.2 False True 1887.893866293506 1793.9305214682545 1873.0369876588345 1754.8897022188514 1826.7062498470443 2119.993723052711 1698.3626808082722 1805.9459029298162 1874.6582983030605 2055.0020356549476 2025.183039224871 0.9322090051752006 0.8858115472638328 0.9248729380904407 0.8665338728545381 0.9019956292672722 1.046815859105816 0.8386218173436374 0.8917445326922318 0.9256735129584025 1.0147240994283113 1.0 10.983836591596697 -10.277313193554084 0.6764593189267202 1.0014890793040034 0.9109373108454858 0.3364567640159791 0.0505447613227969 0.7188126464555238 0.603142547352972 0.03403972388554279 0.010401725521162173 5.2806429832036347e-11 10.277313193554084 -0.09055176845851765 NPIHNIPST(ph)LDK ddPTM_A549_MK2206_60min_R1 2 NPIHNIPSTLDK 12 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 NPIHNIPS(0.154)T(0.846)LDK;NPIHNIPS(0.178)T(0.822)LDK 70.529 0.0026796 12682400.0 2050.97 2103.5699999999997 1803.85 2039.1 2871.9 3141.5 2487.5 2279.6 3910.8 3477.7 3620.1 True False 2397.1235945977746 2210.632727926074 2059.663054289166 2538.6795915386765 2449.447314382926 3473.9314448410723 2939.4465512784636 2602.740280982209 3025.0100442643097 2692.085154632453 2721.12926032275 0.8809297042777948 0.8123953390085826 0.7569148163306554 0.932950752673016 0.9001583828077319 1.2766506521741028 1.0802304007159953 0.9564927028396663 1.111674512626981 0.9893264512958668 1.0 11.40998977443503 -6.894136221822397 2.682136053630705 1.062296119607122 0.8309418070364952 0.5614128586359026 0.09195448573835832 0.15045510975642154 2.1930907249606197 0.013410795741773554 0.02742349378943066 1.276038500814831e-07 6.894136221822397 -0.23135431257062666 NPIHNIPST(ph)LDK ddPTM_A549_PD325901_60min_R1 2 NPIHNIPSTLDK 12 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 NPIHNIPS(0.211)T(0.789)LDK;NPIHNIPS(0.186)T(0.814)LDK 59.708999999999996 0.0083917 10892600.0 3993.0 4471.299999999999 4188.2 3951.3999999999996 4347.9 3917.0 3817.1000000000004 4577.5 4719.5 4729.7 5104.5 True False 4398.36642050876 4848.112143028715 4472.436437692552 4195.469003719488 4042.5185034407127 3885.101250677212 3962.361829297266 4486.198171520716 4521.155827503347 4431.065934824351 4476.678860091529 0.9825065764084834 1.0829707232851613 0.9990523281808761 0.937183375184904 0.9030173103276969 0.8678534628230578 0.8851119218357898 1.0021264226733013 1.0099352597766882 0.9898109900904875 1.0 12.12821311316244 -8.471639688356099 24.994899694068405 1.0047621812177374 0.951800080009994 0.15005758203620223 0.056199426088940775 538.2327865364856 262555.6985715308 0.010308955702680832 0.012462865914022065 3.375672545864155e-09 8.471639688356099 -0.05296210120774336 NPIHNIPST(ph)LDKQTNWSK ddPTM_A549_MK2206_60min_R1 1 NPIHNIPSTLDKQTNWSK 18 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 NPIHNIPS(0.134)T(0.851)LDKQT(0.006)NWS(0.009)K 84.762 5.2776000000000004e-05 6926200.0 2028.1 2334.0 2660.2 2285.1 4354.7 3024.6 3082.2 2612.0 4859.6 4332.9 3677.1 True False 2370.393697715591 2452.790630679968 3037.45636112761 2844.949602582038 3714.1293986362093 3344.661164433013 3642.1958433569757 2982.2589989145167 3758.908359186568 3354.0948806702563 2763.9745872027797 0.8576032893683354 0.887414320680228 1.0989451115762976 1.0292965846191833 1.3437639462506827 1.2100911419080391 1.3177385422501227 1.078974825862146 1.359964876880684 1.2135042399448017 1.0 11.432528635885701 -5.884976141903168 1.4111822481995486 1.1881239726170616 0.8323771064956497 0.5486192342976649 0.11292654528537839 0.4027671850745538 1.331017853819946 0.02118398314301341 0.14578498714904606 1.3032383702742042e-06 5.884976141903168 -0.35574686612141193 NPLEELRPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NPLEELRPSPR 11 1 F8W130;Q12815;F8W052;F8VXF3;B7Z5Q9;F8W1E3;Q12815-3;Q12815-2 F8W130 TROAP Tastin 1 NPLEELRPS(1)PR;NPLEELRPS(1)PR 91.81200000000001 8.2289e-05 9877900.0 716.36 1235.3400000000001 1168.0 1090.18 1449.15 1070.18 849.25 648.26 1514.95 1328.18 1506.27 True False 837.2640546795235 1298.2135294362429 1333.639963084374 1357.2741489400394 1235.9819546773972 1183.4257372720099 1003.5477321299435 740.1528402129878 1171.816243878034 1028.1432155389289 1132.2215880628564 0.7394878030121449 1.1466072923564246 1.1778966035845764 1.1987707735393303 1.0916431621764664 1.0452244947005116 0.8863527623130169 0.65371730058542 1.0349707656457257 0.90807596885518 1.0 10.14494062155498 -7.533059016258133 23.210247917819153 0.9746734283309704 1.0861679796586596 0.15285218998691086 0.15506285071056064 165.91113837075395 378262.8834535483 0.024271130731716096 0.03602952142185301 2.9304949933553618e-08 7.533059016258133 0.11149455132768926 NPLEELRPS(ph)PR ddPTM_A549_PD325901_60min_R1 3 NPLEELRPSPR 11 1 F8W130;Q12815;F8W052;F8VXF3;B7Z5Q9;F8W1E3;Q12815-3;Q12815-2 F8W130 TROAP Tastin 1 NPLEELRPS(1)PR;NPLEELRPS(1)PR;NPLEELRPS(1)PR 84.75299999999999 0.00013675 14317200.0 1739.86 1592.34 1658.66 2225.87 2040.73 1861.22 1848.47 1904.8900000000003 2045.97 1920.21 2537.64 True False 1916.4893063827628 1726.5320801177152 1771.226641932842 2363.356934582453 1897.396164936307 1846.0628414055234 1918.8145373715965 1866.895474592704 1959.9849959523303 1798.9676128949118 2225.526367425343 0.8611397889659257 0.7757859468163022 0.7958686393735838 1.0619316711653086 0.8525606313671127 0.8294949313681637 0.8621845894332972 0.8388556981027683 0.880683789974499 0.8083335426738141 1.0 11.119930878208251 -10.365677148158213 0.6012483336118192 1.0091399714604643 0.8587706605945457 0.0 0.08985205195620306 0.8298653163137586 0.5123898867580173 0.06363519006432286 0.01597964356947962 4.30846780312499e-11 10.365677148158213 -0.15036931086591865 NPLPPILGS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 NPLPPILGSPTK 12 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NPLPPILGS(0.993)PT(0.007)K;NPLPPILGS(0.974)PT(0.026)K 101.32 0.00022881 22436000.0 4046.6 5510.299999999999 5138.9 4868.5 6613.0 5618.4 4916.0 5867.3 7188.6 6664.4 7422.0 True False 4729.567150128646 5790.750733605753 5867.673293060178 6061.282718555269 5640.23646018813 6212.935358807918 5809.173566265299 6699.007742852657 5560.393577835328 5158.907411373181 5578.912563220755 0.847757891261559 1.037971229694753 1.0517593216540249 1.0864631144274535 1.0109920878437235 1.1136463044369953 1.041273456150317 1.2007730300374633 0.9966805385143488 0.9247155880132487 1.0 12.445768225258272 -5.260353682476067 24.113534724645202 1.032403012006301 0.8477578015854378 0.3913910436662701 0.0692405864828758 44.18484682163966 981123.8513444236 0.009072770907927217 0.07656301893897857 5.490935187483783e-06 5.260353682476067 -0.18464521042086324 NPLPPILGS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 NPLPPILGSPTK 12 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NPLPPILGS(0.994)PT(0.006)K;NPLPPILGS(0.99)PT(0.01)K 119.63 1.6917e-05 40378000.0 10654.1 11247.099999999999 11498.7 11868.2 14728.0 14084.3 12100.3 12503.7 13465.1 12538.4 14894.5 True False 11735.696388866123 12194.932588700882 12279.070929300258 12601.271759362156 13693.556088841691 13969.60213043478 12560.783538038231 12254.303894537112 12899.208673146575 11746.723284183261 13062.570924014735 0.898421639747101 0.9335782871257944 0.9400194648303069 0.9646854231578174 1.0483048221133044 1.069437418690108 0.961585863235085 0.9381234341861697 0.987493866879771 0.8992657993984653 1.0 13.673151249963759 -6.278749678121594 2.4925636129818782 0.9961291825054892 0.9203719747790879 0.24179959644672655 0.04593769502637971 0.21832912795363896 2.6442977856684253 0.005348017807572171 0.015665427424263502 5.263205435229046e-07 6.278749678121594 -0.07575720772640127 NPLPS(ph)KETIEQEK ddPTM_A549_MK2206_60min_R1 1 NPLPSKETIEQEK 13 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 NPLPS(0.825)KET(0.175)IEQEK 51.888000000000005 0.0070342 5217200.0 1450.0 1992.8 1810.9 1803.9 1955.1 1969.6 2359.0 2122.1 3093.5 2495.4 2981.8 True False 1694.7245509036072 2094.225008062999 2067.7128502992223 2245.8555809801474 1667.5073799053082 2178.0217646853316 2787.5997646094056 2422.9141736586867 2392.8271893043975 1931.687406869432 2241.336766506553 0.7561222285864164 0.934364277317929 0.922535551639592 1.002016124725709 0.7439789525713975 0.9717512322256209 1.243721963725372 1.0810129962911144 1.0675893177061313 0.8618461249267086 1.0 11.130143718368455 -7.521490940751324 24.999939576460157 1.054071713448688 0.8825848690500708 0.37886117452877455 0.10891848134445385 38.04766117441733 685393.8486781653 0.01417495061726161 0.021189971770661734 3.009601947584952e-08 7.521490940751324 -0.17148684439861728 NPLPSKETIEQEK ddPTM_A549_MK2206_60min_R1 2 NPLPSKETIEQEK 13 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ; 151.9 4.5138000000000004e-13 22883000.0 10995.2 12692.0 12377.9 13205.3 16672.9 15517.2 13979.6 15714.400000000001 19430.2 16729.7 15604.6 False True 12850.920953169205 13337.968588084888 14133.272345087395 16440.59909280845 14220.338496457078 17159.219804516266 16519.512365126593 17941.96432333165 15029.29072365356 12950.449150718736 11729.547154949423 1.095602480079259 1.137125620613305 1.2049290700130475 1.401639711714799 1.2123518758741367 1.4629055647110576 1.4083674456397055 1.52963827898171 1.281318922641593 1.1040877349859273 1.0 13.51785969556549 -10.316932800749944 0.9523398129683552 1.0180529441026365 1.3060047572877325 0.33706525074246374 0.13349423042993297 0.400214026836824 0.7060628024385994 0.06687366872771357 0.026435497487405035 4.820223761373156e-11 10.316932800749944 0.287951813185096 NPLPSKETIEQEKQAGES(ph) ddPTM_A549_MK2206_60min_R1 1 NPLPSKETIEQEKQAGES 18 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 NPLPSKETIEQEKQAGES(1) 84.762 3.0807e-05 4281700.0 1542.5 2235.2 2451.5 1788.5 2472.5 1530.9 1621.7 1274.8 2245.2 2660.6 2456.1 True False 1802.8362894957356 2348.9621326888864 2799.1595629292297 2226.682580288815 2108.798525300945 1692.8988218708241 1916.3418983751899 1455.5068039112653 1736.6657848476593 2059.5686121330496 1846.182585088451 0.9765211220478289 1.2723346822038986 1.5161878275409695 1.2061009557091744 1.1422480865834361 0.9169725874051168 1.0380023697836893 0.7883872460217858 0.9406793233099722 1.1155822987217567 1.0 10.850329525389835 -7.016776454388933 2.523169864156859 0.9579187030075905 1.265255012439106 0.4617517900669149 0.1395685441401309 0.16797127809990098 2.1397613521521697 0.01929637956030921 0.0377885333400028 9.621073791675726e-08 7.016776454388933 0.30733630943151546 NPLPSKETIEQEKQAGES(ph) ddPTM_A549_PD325901_60min_R1 2 NPLPSKETIEQEKQAGES 18 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 NPLPSKETIEQEKQAGES(1);NPLPSKETIEQEKQAGES(1) 107.74 1.3036000000000001e-09 17300300.0 4938.0 4811.700000000001 5496.5 5804.0 6271.4 7072.799999999999 5761.1 7750.2 7404.700000000001 6489.1 6759.4 True False 5439.302124836532 5217.198845662618 5869.525543139561 6162.499898159619 5830.918499155476 7015.201461779363 5980.341813094883 7595.616181085715 7093.506209537878 6079.377118563263 5928.036651366966 0.9175554141660486 0.8800888308373678 0.9901297661150741 1.0395515852181156 0.9836171471394166 1.1833937396729326 1.008823353296214 1.2813038494514395 1.1966029609317888 1.0255296105771208 1.0 12.5333386521071 -6.341475379704206 0.9660100631114285 1.1079492599753018 0.8888373998136262 0.44613710448800525 0.0874612866767938 0.5459458062516782 0.8532846462833308 0.01572601046945951 0.08348837499388893 4.555380100320814e-07 6.341475379704206 -0.2191118601616756 NPNGPYPYTLK ddPTM_A549_PD325901_60min_R1 1 NPNGPYPYTLK 11 0 P14866;M0QXS5;A0A3B3ITJ4;P14866-2 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 100.88 1.9864e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NPNQSSQVMDPPTARPTEPES(ph)PKNDREGPQ ddPTM_A549_MK2206_60min_R1 1 NPNQSSQVMDPPTARPTEPESPKNDREGPQ 30 3 Q15025-4;Q15025-3;Q15025 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 1 NPNQSSQVMDPPT(0.004)ARPT(0.014)EPES(0.983)PKNDREGPQ 85.20299999999999 6.8756e-07 12375000.0 1044.8 1188.1 1256.1 883.45 1385.0 882.56 860.83 1123.1 1540.9 1419.8 1618.0 True False 1221.136697092475 1248.5692152145969 1434.2338678341446 1099.8952896595779 1181.2683346984059 975.951913404086 1017.2316682359958 1282.3028643494993 1191.8886103116686 1099.0661939060751 1216.2059454717296 1.0040542077919483 1.0266100242836047 1.1792689167276258 0.9043659864966058 0.9712732774384091 0.8024561276302129 0.8363975460105503 1.0543468144715678 0.9800055777965885 0.9036842797868255 1.0 10.248171831990723 -6.2819281613336475 24.957513511593607 0.9644838125401265 1.0656409773009998 0.2982437332572254 0.08411099120425575 895.1559225311929 1090392.9862922227 0.012191960147746952 0.028360883544599702 5.224826081251299e-07 6.2819281613336475 0.10115716476087333 NPNQSSQVMDPPTARPTEPES(ph)PKNDREGPQ ddPTM_A549_PD325901_60min_R1 2 NPNQSSQVMDPPTARPTEPESPKNDREGPQ 30 3 Q15025-4;Q15025-3;Q15025 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 1 NPNQSSQVMDPPT(0.023)ARPT(0.225)EPES(0.752)PKNDREGPQ;NPNQSSQVMDPPT(0.007)ARPT(0.023)EPES(0.969)PKNDREGPQ 64.936 0.00028944 33292000.0 3702.8 3016.7 3804.9 3585.7 4931.0 5042.9 4120.4 3698.8 4524.6 4867.9 4942.2 True False 4078.70553014271 3270.927896109572 4063.123394722411 3807.180545284451 4584.663571026508 5001.832294368167 4277.204076769393 3625.0245323475315 4334.446796720337 4560.53996323899 4334.340731187057 0.9410209725310784 0.7546540752032097 0.9374259308888327 0.8783759241377798 1.0577533828935721 1.1540007130446117 0.9868176827893235 0.8363496912608291 1.0000244709726018 1.052187690373383 1.0 12.081596855692114 -6.741778748190824 22.95212038243342 1.0015840829646898 0.873322000313803 0.3630969461454283 0.08489138787791747 83.37722450575164 97334.05132876827 0.01188003282245168 0.02469121044607746 1.8122631169520785e-07 6.741778748190824 -0.1282620826508868 NPPENSDS(ph)GTGKKEK ddPTM_A549_MK2206_60min_R1 1 NPPENSDSGTGKKEK 15 2 P55010;H0YN40 P55010 EIF5 Eukaryotic translation initiation factor 5 1 NPPENS(0.019)DS(0.491)GT(0.491)GKKEK 58.997 0.0015346 16041000.0 1488.7 1447.8 1633.4 1162.4 1539.3 1106.8 992.13 783.13 1534.5 2644.3 2493.7 True False 1739.9561647794492 1521.486835946211 1865.0406812517253 1447.1880521821197 1312.8710090983793 1223.9208413656202 1172.387178661267 894.1410757350401 1186.9382000929686 2046.9507934538922 1874.4454673812443 0.9282511521715872 0.8116997066187549 0.9949826301734677 0.7720619657204333 0.7004050168141562 0.6529508927648554 0.6254581416546564 0.4770163183163868 0.6332209822840137 1.092030058529071 1.0 10.872248139051466 -6.380764138849303 7.7266699178267935 0.7592061528412721 0.9012381449765275 0.1584393703668603 0.16907884333181247 0.5010741754730575 29.814211766789686 0.026460987326713696 0.06169107276243559 4.161365488881304e-07 6.380764138849303 0.1420319921352554 NPPENSDS(ph)GTGKKEK ddPTM_A549_PD325901_60min_R1 1 NPPENSDSGTGKKEK 15 2 P55010;H0YN40 P55010 EIF5 Eukaryotic translation initiation factor 5 1 NPPENS(0.025)DS(0.488)GT(0.488)GKKEK 52.298 0.004084 12849000.0 1068.1 845.95 1027.6 1172.8 1126.8 1198.9 977.17 944.96 1099.5 1280.9 1455.5 True False 1176.5327257063377 917.2411753617829 1097.339115460787 1245.2411923779464 1047.6574552489697 1189.1365558940288 1014.3567390779411 926.1120314932208 1053.2918386142453 1200.0237554002385 1276.482727174692 0.9216989001570127 0.7185692025711639 0.8596584129967719 0.9755252976545212 0.8207376668290737 0.9315727746085596 0.7946497962593443 0.7255186551117966 0.8251516579041793 0.9401018359694657 1.0 10.31795830059904 -10.627587333241712 0.97289835383466 0.9972685414352584 0.8403902983125533 0.27652114761601754 0.07827198131259104 0.4555098018214904 0.7883104633384682 0.047391309948190394 0.013758558973347141 2.3572881159943797e-11 10.627587333241712 -0.15687824312270515 NPPENSDSGT(ph)GKKEK ddPTM_A549_MK2206_60min_R1 1 NPPENSDSGTGKKEK 15 2 P55010;H0YN40 P55010 EIF5 Eukaryotic translation initiation factor 5 1 NPPENS(0.035)DS(0.314)GT(0.651)GKKEK 49.528 0.008641 17437000.0 1596.4 1609.4 1909.3 998.79 1559.3 1280.9 1283.4 1003.5 1541.2 2775.2 2615.3 True False 1865.833291767255 1691.3115856968036 2180.067449928935 1243.4935948373866 1329.9290355922194 1416.4439878073943 1516.5771674013183 1145.7491980898606 1192.1206607906693 2148.2803925398925 1965.848831391974 0.9491234839487123 0.8603467157234177 1.108970036310105 0.6325479228008067 0.6765164311492486 0.7205253858733591 0.7714617437432681 0.5828267055908775 0.6064152246877269 1.0928004016558805 1.0 10.940936671149226 -6.264150504584758 24.997623607087494 0.7646149811576434 0.9615667389418481 0.25877871143713427 0.1596894265201881 286.3890170324229 2640632.022999177 0.02413490868255891 0.058553196101124645 5.443139883513343e-07 6.264150504584758 0.1969517577842047 NPPENSDSGT(ph)GKKEK ddPTM_A549_PD325901_60min_R1 1 NPPENSDSGTGKKEK 15 2 P55010;H0YN40 P55010 EIF5 Eukaryotic translation initiation factor 5 1 NPPENS(0.028)DS(0.134)GT(0.838)GKKEK 67.995 0.00096076 16019000.0 2047.0 1778.6 2020.2 1982.4 2476.8 2482.6 1257.6 2287.2 2095.3 2444.6 2790.1 True False 2254.809933078246 1928.4888639972437 2157.3029204494756 2104.8483456429403 2302.8381124961384 2462.3825287034065 1305.4586561851258 2241.5800017263105 2007.241827602026 2290.2475388019534 2446.9353879011414 0.9214832333649435 0.7881241464456504 0.8816346075651397 0.8601977624952222 0.9411111236865953 1.0063128519366074 0.5335076122728696 0.9160764983046918 0.8203084713747744 0.9359656777723147 1.0 11.256760291765827 -10.771087517221167 0.975285049209651 1.0016409856540407 0.8496233848079372 0.1191703205818534 0.11742137419934458 0.7541217742424752 1.2509863314072014 0.08078189403801507 0.01957128910917134 1.693996398927315e-11 10.771087517221167 -0.1520176008461035 NPPGFAFVEFEDPRDAADAVR ddPTM_A549_MK2206_60min_R1 1 NPPGFAFVEFEDPRDAADAVR 21 1 P84103;P84103-2;A0A087X2D0 P84103 SRSF3 Serine/arginine-rich splicing factor 3 0 49.865 0.012993000000000001 1628100.0 469.16 419.04 448.53 384.3 599.15 490.98 371.9 545.62 838.0 538.52 701.61 False True 548.342738139267 440.3673461354471 512.138298495063 478.4535172518827 511.0158286892054 542.935177713853 439.4694160484263 622.9633058911708 648.1943380110183 416.86795798161677 527.3808735490857 1.039747108098774 0.83500818520765 0.9710975960287571 0.9072257665168264 0.9689692105256884 1.0294934931183461 0.8333055635691782 1.1812398536542468 1.2290819984594834 0.7904495192937956 1.0 9.042701439899751 -8.270152778919659 24.995352170405944 1.1166798890119132 0.9410128844336278 0.06654446052948615 0.12795099741350185 476.26317152018083 1366210.8230179106 0.016575666326952808 0.020193454894506378 5.368429090800703e-09 8.270152778919659 -0.17566700457828532 NPPGFAFVEFEDPRDAADAVR ddPTM_A549_PD325901_60min_R1 2 NPPGFAFVEFEDPRDAADAVR 21 1 P84103;P84103-2;A0A087X2D0 P84103 SRSF3 Serine/arginine-rich splicing factor 3 0 ; 67.227 0.0011427 6400400.0 2011.5700000000002 2380.2 2563.0 2529.3 2683.5 2835.6000000000004 3189.8 2889.4 2674.3 3096.3 2749.2 False True 2215.783105560434 2580.787807312625 2736.940592571036 2685.529116542922 2495.020217572426 2812.507813740183 3311.189584525535 2831.768650309549 2561.9084711287637 2900.7990895821345 2411.0658286146795 0.9190056444180751 1.070392926100845 1.1351579704248862 1.1138348379670497 1.0348204466096989 1.1664998028511562 1.3733302281622222 1.1744883182789712 1.0625626396110277 1.20311899208859 1.0 11.235455325614744 -9.078168236886695 2.7654568454317663 1.0237354949858102 1.1279682942991875 0.0 0.11813481831702882 0.35537175103726 5.625185923845325 0.021217410532094312 0.02083468268989073 8.352793852336042e-10 9.078168236886695 0.10423279931337737 NPPGFAFVEFEDPRDAEDAVR ddPTM_A549_MK2206_60min_R1 1 NPPGFAFVEFEDPRDAEDAVR 21 1 Q16629-4;Q16629;C9JAB2;A0A0B4J1Z1;Q16629-3;Q16629-2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 0 70.414 0.00071644 1504600.0 708.75 506.66 835.41 650.28 727.32 705.12 864.34 829.69 792.2 771.27 785.59 False True 828.3696727261603 532.446829880168 953.8836999660249 809.5986291921785 620.3321914749782 779.7353303792252 1021.37938980182 947.3010983190593 612.767964883447 597.0395713297216 590.5063218189963 1.4028125392027124 0.9016784583101808 1.6153657712379446 1.371024490810344 1.050508976032816 1.3204521299235674 1.7296671552229312 1.6042183856745038 1.0376992459553624 1.0110638095974998 1.0 9.205808694626784 -8.858101393466102 9.099904004528293 1.016813939460316 1.365646022853591 0.3289893523992159 0.22769544575176465 0.24438280217683223 20.911427585675398 0.04014095167341635 0.04268192315678425 1.3864321048238187e-09 8.858101393466102 0.348832083393275 NPPGFAFVEFEDPRDAEDAVR ddPTM_A549_PD325901_60min_R1 2 NPPGFAFVEFEDPRDAEDAVR 21 1 Q16629-4;Q16629;C9JAB2;A0A0B4J1Z1;Q16629-3;Q16629-2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 0 ; 60.621 0.0020263 3340500.0 2481.3999999999996 2769.3 2940.4 2749.2 3215.9 3701.1000000000004 2878.1 3482.8 3081.5 3396.5 3372.7 False True 2733.309901289867 3002.678629859196 3139.953226061595 2919.011840113789 2990.0262782527166 3670.959468695794 2987.6276704567517 3413.3328217962535 2951.995271204908 3182.044410349683 2957.8792813068244 0.9240775709014939 1.0151457663723784 1.061555569865694 0.9868596932137598 1.0108682586030655 1.241078191356722 1.0100573371394603 1.1539797595418446 0.9980107335214449 1.0757857599055969 1.0 11.530347458189702 -3.88466303644359 12.522213300524031 1.0243337059153115 0.6110293247668274 0.0 0.08582711256877684 0.0 0.0 0.010801975248190298 0.0 0.00013041782813111427 3.88466303644359 -0.4133043811484841 NPPGGKS(ph)SLVLG ddPTM_A549_MK2206_60min_R1 1 NPPGGKSSLVLG 12 1 Q9UK76;Q9UK76-3 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 NPPGGKS(0.5)S(0.5)LVLG 60.157 0.007370699999999999 2558800.0 2493.4 2928.8 2918.9 3069.2 4225.7 3044.4 3348.6 2803.0 4992.7 4575.7 4850.1 True False 2914.224962222796 3077.8634100837585 3332.8439111703597 3821.154137781623 3604.1051277509423 3366.556387290834 3956.997275019523 3200.333833827485 3861.861421703591 3542.046192038335 3645.686314049715 0.7993625098769416 0.8442480084538032 0.9141883376872756 1.0481302582330498 0.9885944146816671 0.9234355611772818 1.08539159273525 0.8778412507664375 1.0592961349474261 0.9715718487320282 1.0 11.831974717505442 -5.921355030850002 2.206596882730079 1.012835105405474 0.8104052170229136 0.5464548529946458 0.05922842398540391 0.1491197049297409 1.4073685154340763 0.00799785892528898 0.035129248964338444 1.1985191266683035e-06 5.921355030850002 -0.20242988838256049 NPPGGKS(ph)SLVLG ddPTM_A549_PD325901_60min_R1 1 NPPGGKSSLVLG 12 1 Q9UK76;Q9UK76-3 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 NPPGGKS(0.5)S(0.5)LVLG 45.79 0.037472000000000005 2137900.0 2313.6 2179.1 2253.9 2506.8 2790.5 2510.9 2979.5 3070.5 2999.2 2834.8 2810.4 True False 2548.474968817699 2362.7404045521143 2406.8632078017404 2661.639342644131 2594.5049067023856 2490.4520628862424 3092.8865029449603 3009.2564687393483 2873.1540539989464 2655.810244210005 2464.7386165934417 1.0339737251084218 0.95861702683009 0.9765186424223384 1.0798870617456504 1.0526491081996743 1.0104325246172918 1.2548537528980224 1.2209231634056572 1.1657033466574978 1.0775220651513329 1.0 11.267218942811283 -6.61240952713422 1.3042403398789073 1.1012227561122843 0.9866904648996504 0.3124089924235597 0.07791342492490613 0.5897954944598232 1.9548590155788703 0.014812548612214064 0.04635219811347051 2.441127554361455e-07 6.61240952713422 -0.11453229121263386 NPPPQDYESDDDS(ph)YEVLDLTEYAR ddPTM_A549_PD325901_60min_R1 1 NPPPQDYESDDDSYEVLDLTEYAR 24 0 Q8IVP5 Q8IVP5 FUNDC1 FUN14 domain-containing protein 1 1 NPPPQDY(0.053)ES(0.369)DDDS(0.485)Y(0.093)EVLDLTEYAR 74.579 1.0332e-05 1764900.0 375.57 539.81 515.17 438.31 449.84 410.01 592.09 733.51 475.44 521.5 866.67 True False 413.6975899199787 585.3016831633596 550.1325341688727 465.3834132257654 418.24479026375246 406.6710144983821 614.6223089540798 718.8795676225373 455.45891018713667 488.57240100025325 760.0750842737831 0.5442851613998738 0.7700577157092164 0.7237870909747016 0.6122861054844574 0.5502677286986274 0.5350405807433322 0.8086336753708001 0.9458007274497016 0.5992288388486077 0.642794917382487 1.0 9.569998132487346 -7.813544702407248 10.706478015706045 0.8181674529116642 0.6302116692466151 0.3160821671325409 0.12777671596757748 0.5704200733143452 114.73469697270959 0.02501369271813792 0.03459253188986208 1.5362266596986705e-08 7.813544702407248 -0.18795578366504906 NPPPS(ph)PAPEPTVIR ddPTM_A549_MK2206_60min_R1 2 NPPPSPAPEPTVIR 14 0 Q0D2K0-2;Q0D2K0 Q0D2K0-2 NIPAL4 Magnesium transporter NIPA4 1 NPPPS(0.998)PAPEPT(0.002)VIR;NPPPS(1)PAPEPTVIR 87.02 8.1772e-05 7130800.0 3183.3999999999996 3552.8 3673.3999999999996 3690.4 5024.1 3620.5 3247.5 4197.6 4684.8 5295.4 5343.8 True False 3720.680093342445 3733.622344764264 4194.34335650183 4594.5481656683505 4285.061545385027 4003.6189069066054 3837.5287136791226 4792.622654610865 3623.7002800883297 4099.165462184975 4016.786978622889 0.9262826515679553 0.9295046923410152 1.044203583317683 1.1438366510647127 1.0667883480478004 0.9967217400906836 0.9553727230500973 1.1931483247971397 0.9021390228990125 1.0205085517356283 1.0 11.971826237946546 NPPS(ph)PRPSQLPVLDR ddPTM_A549_MK2206_60min_R1 2 NPPSPRPSQLPVLDR 15 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 NPPS(0.985)PRPS(0.015)QLPVLDR;NPPS(0.999)PRPS(0.001)QLPVLDR 77.39 0.00015717 50344000.0 989.01 1215.05 1485.4099999999999 1462.34 1898.67 1547.31 1223.81 1390.3 1958.01 1646.73 2030.8400000000001 True False 1155.930709027018 1276.8908551018403 1696.0634739427735 1820.613365646936 1619.3781581529406 1711.0453171787476 1446.160435746772 1587.379282615181 1514.523861299467 1274.7325492963453 1526.5263796673723 0.7572294356805636 0.8364682537487972 1.111060703918096 1.1926510998412256 1.0608255315612696 1.1208750402017826 0.9473537142947297 1.0398636432087525 0.992137365899618 0.8350543863998652 1.0 10.576036805413109 -5.624241925216196 5.2585970294163005 1.0270210942252285 0.7761149268663452 0.5078171344576591 0.09074469526213386 0.09876725441608641 4.136386925217589 0.01060607072047111 0.043615529118568065 2.3755166283788263e-06 5.624241925216196 -0.25090616735888327 NPPS(ph)PRPSQLPVLDR ddPTM_A549_PD325901_60min_R1 4 NPPSPRPSQLPVLDR 15 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 NPPS(1)PRPSQLPVLDR;NPPS(0.967)PRPS(0.033)QLPVLDR;NPPS(0.995)PRPS(0.005)QLPVLDR;NPPS(0.995)PRPS(0.005)QLPVLDR 97.271 4.191e-06 112080800.0 3254.1800000000003 3900.9500000000003 3784.75 3885.96 4958.700000000001 3681.71 4281.47 4268.66 3720.8900000000003 4026.15 4214.33 True False 3584.541957999302 4229.696746885214 4041.605894550617 4125.986923544512 4610.418018586321 3651.7273744270597 4444.4036837602835 4183.518227601012 3564.5139330435286 3771.9382018929437 3695.994126838969 0.9698451444956739 1.1444002889968603 1.0935098260037646 1.1163402272701386 1.247409454768106 0.9880230457915341 1.2024920850081 1.13190608102481 0.9644262979638742 1.0205476720058877 1.0 11.8517467488871 -8.760740359780021 24.999982070423012 0.9832013019429101 1.1157984539033134 0.3064266132836918 0.0775008622573843 13.061603586744209 467136.1588360596 0.01213091037208981 0.013360920337796888 1.7348408514586882e-09 8.760740359780021 0.13259715196040334 NPPSTEVVIKEES(ph)SPKK ddPTM_A549_PD325901_60min_R1 1 NPPSTEVVIKEESSPKK 17 2 Q8WYL5;Q8WYL5-4 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 NPPSTEVVIKEES(0.5)S(0.5)PKK 67.251 0.00041368 8074600.0 2502.9 2428.5 2302.3 2690.0 3010.7 2938.3 2997.7 2768.3 2645.7 2635.0 3041.4 True False 2756.992565462405 2633.1582178214926 2458.547922854584 2856.1551905667434 2799.2388183511475 2914.3714589902615 3111.779113904383 2713.0840848106627 2534.510429669582 2468.6256503080876 2667.3270810230924 1.0336162314240516 0.9871898488023096 0.9217272003670326 1.070793008809112 1.0494546537867633 1.0926187042169615 1.166628245948305 1.017154627984364 0.9502060874729444 0.9255054124675292 1.0 11.381179030899546 -8.529861524148012 22.036877205841666 0.9768648072672931 1.0454160472924825 0.27198619940767554 0.06052269077199852 49.54663225920736 156360.89840975334 0.010796482651569598 0.012263541511806506 2.952150376943256e-09 8.529861524148012 0.06855124002518942 NPQMPQYSSPQPGSALS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NPQMPQYSSPQPGSALSPR 19 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 NPQMPQYS(0.009)S(0.059)PQPGS(0.101)ALS(0.832)PR;NPQMPQYSS(0.002)PQPGS(0.031)ALS(0.967)PR 126.84 1.7477e-15 6589000.0 1684.57 1727.0 2306.3999999999996 1802.55 2450.4 2281.0 1933.3400000000001 2128.0 3206.5 2865.3 3097.8 True False 1968.8842322177181 1814.8969233865912 2633.4822010768826 2244.1748309195445 2089.9494060252528 2522.3739059947434 2284.602852441691 2429.650516726679 2480.232869728317 2218.026739962724 2328.5307650694212 0.8455478715390815 0.7794171975788703 1.130963026377867 0.9637728925830354 0.8975399584050351 1.0832469743725044 0.9811349228076784 1.0434264185700992 1.0651492807974015 0.9525434549698112 1.0 11.185204228155898 -5.7487761717757255 24.999918194233715 1.0240343479056528 0.8124824287819398 0.5828667442364466 0.06491553089180285 101.31628035068842 200016.58928855963 0.00811189133644868 0.030991202883081603 1.7832976128722599e-06 5.7487761717757255 -0.21155191912371307 NPQMPQYSSPQPGSALS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NPQMPQYSSPQPGSALSPR 19 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3;A0A087WUV6 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 NPQMPQYS(0.008)S(0.005)PQPGS(0.1)ALS(0.886)PR;NPQMPQY(0.001)S(0.018)S(0.016)PQPGS(0.112)ALS(0.854)PR 106.57 1.3699e-09 10551900.0 1883.62 2103.54 2680.15 2335.9 3539.7 2833.83 2723.8 2641.6000000000004 2811.3 3458.8 2863.7 True False 2074.843715752246 2280.8126981742716 2862.0410960512145 2480.183237786191 3291.083683302073 2810.7522280333405 2827.455699520551 2588.9112157048903 2693.150837559097 3240.410777717498 2511.483054489979 0.8261428290518951 0.9081537277731898 1.1395820851486593 0.987537317184828 1.3104144491113883 1.1191603395485126 1.1258111793610084 1.030829657033316 1.0723348631575818 1.2902379619581175 1.0 11.294323825534562 -5.60401153134815 4.900269895754268 1.0667058688332132 0.8439105449620836 0.37961143485538806 0.11022732239478282 0.13111520577677593 5.434246460414687 0.01256259441131253 0.05318480773652552 2.4887912352433143e-06 5.60401153134815 -0.22279532387112955 NPQNS(ph)SQSADGLR ddPTM_A549_MK2206_60min_R1 1 NPQNSSQSADGLR 13 0 P0DN76;Q01081 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit 1 NPQNS(0.358)S(0.358)QS(0.284)ADGLR 49.626999999999995 0.029976 1510900.0 532.87 588.9 493.77 463.28 399.39 478.85 382.87 402.42 649.77 577.98 543.39 True False 622.8054285793143 618.8724946047272 563.794010763845 576.7836207974296 340.6402600687338 529.5215891650954 452.4325230504468 459.46426735956305 502.5981324694739 447.41391657545654 408.4512661989389 1.5247973996387925 1.5151685055697715 1.3803213685944244 1.4121234735418922 0.8339801789298964 1.2964131415060625 1.1076781013823238 1.1248937275561728 1.2304971830462637 1.095391185193537 1.0 8.674020145239197 -6.6025287876075005 9.543701684222624 1.1109620966569147 1.4641183742316382 0.6858500998827948 0.11735768013399273 0.15302645795928302 16.971347140233025 0.017723182234627627 0.03692816320481789 2.4973028476611486e-07 6.6025287876075005 0.35315627757472345 NPQNS(ph)SQSADGLR ddPTM_A549_PD325901_60min_R1 1 NPQNSSQSADGLR 13 0 P0DN76;Q01081 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit 1 NPQNS(0.333)S(0.333)QS(0.333)ADGLR 52.555 0.023826 1148800.0 544.25 415.28 325.58 455.04 492.56 485.56 604.97 406.13 618.4 406.4 496.69 True False 599.5018593443262 450.27710302528675 347.67581667158703 483.1467873291788 457.96428483975177 481.60576034690513 627.9924644022864 398.02941854717847 592.410798543928 380.7398346433422 435.60027877732614 1.3762660139406953 1.03369333070483 0.7981533383024185 1.1091516944968667 1.0513406605826758 1.1056139855987017 1.4416714015082366 0.9137492282245452 1.359987188728962 0.8740578305230425 1.0 8.766861067131972 -7.530009058580411 24.97407558839796 1.1740666375777422 1.0601883758716244 0.0 0.20582285046666735 398.62648430848964 1396194.577206519 0.030484026879012315 0.0452685918689719 2.9511476705370818e-08 7.530009058580411 -0.11387826170611781 NPQNSS(ph)QSADGLR ddPTM_A549_MK2206_60min_R1 1 NPQNSSQSADGLR 13 0 P0DN76;Q01081 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit 1 NPQNS(0.062)S(0.469)QS(0.469)ADGLR 60.628 0.0080073 1450500.0 344.05 465.57 440.14 530.05 401.73 556.1 467.74 525.82 593.72 431.34 377.98 True False 402.117228785094 489.2655243897484 502.55847033557893 659.9122737948488 342.63604916851307 614.9461328906958 552.7223034753725 600.3565952562141 459.2433679760163 333.89999442135974 284.1171342826974 1.4153219931642214 1.7220556782855896 1.7688425289955647 2.322676791249887 1.2059675669809804 2.1644105852441218 1.9454029228853624 2.1130601530665074 1.6163874422267956 1.1752194927079909 1.0 8.150342028691407 -9.958693513768578 0.8203743435522447 1.0540156208329956 1.8296415820792773 0.436302277688595 0.31459116557707456 0.3368860769712346 0.461787053481479 0.12917053115004204 0.06193528423702822 1.0997816932652387e-10 9.958693513768578 0.7756259612462817 NPS(ph)KSHLR ddPTM_A549_MK2206_60min_R1 3 NPSKSHLR 8 1 Q92615 Q92615 LARP4B La-related protein 4B 1 NPS(0.914)KS(0.086)HLR;NPS(0.995)KS(0.005)HLR;NPS(0.92)KS(0.08)HLR 62.466 0.004363399999999999 47668800.0 3407.11 3791.95 3873.17 3299.48 4008.84 3677.67 3105.22 3240.96 4179.66 4638.8 3995.3 True False 3982.146872158063 3984.9440582720213 4422.443746420805 4107.852748119285 3419.144946478236 4066.8385983602284 3669.398279381271 3700.376005023731 3232.973683545503 3590.891858213483 3003.156745329544 1.3259870229387885 1.3269184382298178 1.4725983761248929 1.3678449366679728 1.1385169794402605 1.3541879239852876 1.221847073113268 1.2321621276606658 1.0765251226308339 1.1957057731994756 1.0 11.55226406085855 -8.390609962888433 0.532618660029201 1.003300634240927 1.3693622260290486 0.5069734675174664 0.09347233703089318 0.2535710985468084 0.16019799209026456 0.023685675294814655 0.030341165751016506 4.068085172956945e-09 8.390609962888433 0.3660615917881216 NPS(ph)KSHLR ddPTM_A549_PD325901_60min_R1 3 NPSKSHLR 8 1 Q92615 Q92615 LARP4B La-related protein 4B 1 NPS(0.966)KS(0.034)HLR;NPS(0.949)KS(0.051)HLR;NPS(0.997)KS(0.003)HLR 59.418 0.0035034999999999997 125730000.0 10753.739999999998 10152.400000000001 10836.369999999999 10235.33 12657.2 10342.150000000001 9327.71 11439.04 10721.68 11338.12 12173.2 True False 11845.451768315019 11007.978377850903 11571.791232586422 10867.543087979004 11768.201936969524 10257.926959328901 9682.681108368766 11210.879373446727 10271.08507524655 10622.229168224341 10675.97357227274 1.109543002155757 1.031098316545147 1.0839096925680172 1.0179439855680985 1.102307143915519 0.9608422960104008 0.906960010983568 1.0501037022574902 0.9620747939955798 0.9949658545251572 1.0 13.382080018842018 -7.269154681400864 24.930897093616416 0.979752666500623 1.06485324586207 0.5399939695646196 0.04118973558922846 339.0797183372472 1095685.342059819 0.005824334933426026 0.009413585154050058 5.3807810267245466e-08 7.269154681400864 0.0851005793614471 NPS(ph)PDHSYKR ddPTM_A549_PD325901_60min_R1 2 NPSPDHSYKR 10 1 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 NPS(1)PDHSYKR;NPS(1)PDHSYKR 50.897 0.005785 10106600.0 1657.44 1508.53 1638.77 1875.77 1942.3899999999999 2039.88 1841.99 1983.35 2252.09 2064.96 2145.94 True False 1825.7020886571618 1635.6591172864946 1749.9867869245554 1991.6320527172404 1805.9632272817234 2023.2678936000575 1912.0879374256047 1943.790528342025 2157.442489153939 1934.5780731917218 1882.0029842344622 0.9700845875118514 0.8691054854792527 0.9298533538916748 1.0582512723949646 0.9595963674926534 1.075060938026651 1.015985603340252 1.0328307365212261 1.14635444642056 1.027935709665543 1.0 10.878053200367669 -6.528429584167585 0.8585941445896387 1.0649067730937054 0.9065393371591383 0.4431666982699374 0.053472488567171995 0.5120188598506986 0.6460066334252379 0.010585188455698894 0.050536711941036705 2.9619001643539e-07 6.528429584167585 -0.15836743593456715 NPS(ph)PGTSAK ddPTM_A549_MK2206_60min_R1 2 NPSPGTSAK 9 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 NPS(0.935)PGT(0.055)S(0.01)AK;NPS(0.52)PGT(0.383)S(0.097)AK 85.81299999999999 0.0012434000000000002 24860000.0 4490.9 5200.1 5041.799999999999 4210.2 6524.9 5850.2 4636.7 5159.5 7208.1 8651.7 8228.5 True False 5248.854128036561 5464.762878577077 5756.803052978418 5241.699189003057 5565.095853482766 6469.264280951532 5479.128371583054 5890.874925306069 5575.476858970429 6697.274961133388 6185.136354953111 0.8486238341105016 0.8835315124784351 0.9307479613393358 0.8474670384276102 0.8997531394802945 1.045937212972013 0.885854095552044 0.9524244232042848 0.9014315188872981 1.0828015061899408 1.0 12.594589685271371 NPS(ph)PPPPGR ddPTM_A549_MK2206_60min_R1 4 NPSPPPPGR 9 0 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 NPS(1)PPPPGR;NPS(1)PPPPGR;NPS(1)PPPPGR;NPS(1)PPPPGR 68.836 0.0042819 81876100.0 4593.88 5635.0 5449.1 5095.369999999999 6465.1 5654.599999999999 4701.0 5671.6 7745.7 6356.0 6592.0 True False 5369.214634417284 5921.797430968985 6221.864317502622 6343.735878739854 5514.092354266187 6252.9660187803 5555.110849270375 6475.566668546543 5991.311317341225 4920.175185566288 4955.024470055404 1.0835899331809453 1.1951096239294197 1.2556677277989412 1.2802632796420725 1.112828480987205 1.261944528542436 1.121106642932131 1.3068687566893362 1.2091385932700014 0.9929668794372822 1.0 12.274676466743964 -10.564071772596717 0.8168265176701519 0.9970056921798677 1.2058914821230693 0.5611458368978783 0.06976046198959203 0.3728484532432406 0.436864358216087 0.04749393895919605 0.012575475272277332 2.7285268223508624e-11 10.564071772596717 0.20888578994320162 NPS(ph)PPPPGR ddPTM_A549_PD325901_60min_R1 1 NPSPPPPGR 9 0 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 NPS(1)PPPPGR 54.005 0.020669999999999997 59420000.0 1743.6 1414.2 1608.2 1742.5 1847.4 1855.6 1697.1 1843.2 1872.9 1977.4 1916.6 True False 1920.6089884295222 1533.3795971353325 1717.3421228922111 1850.1302674953704 1717.6449971840143 1840.488608822218 1761.6840691887528 1806.4359300375731 1794.188526185193 1852.5466265348057 1680.8703503284191 1.1426276797935435 0.9122533435346343 1.0216981473655395 1.1006977826302191 1.021878336332371 1.0949616717688022 1.048078496265071 1.0747027155810205 1.0674163690463296 1.1021353468296013 1.0 10.714992734904415 -4.927399251906471 20.462214016904415 1.0371697487986973 4.3686697132773356 0.20764880531240582 0.05351102271298351 444.5015215568199 131717.44228044344 0.0067203965751880335 3471.062276808833 1.1819544717929154e-05 4.927399251906471 3.3314999644786383 NPS(ph)PPPPGRDKEEEEEVAGGDCIGSTVYSK ddPTM_A549_MK2206_60min_R1 2 NPSPPPPGRDKEEEEEVAGGDCIGSTVYSK 30 2 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 NPS(1)PPPPGRDKEEEEEVAGGDCIGSTVYSK;NPS(1)PPPPGRDKEEEEEVAGGDCIGSTVYSK 143.72 1.9254999999999998e-36 81353000.0 9373.6 11984.7 10406.2 10927.8 17216.3 14376.1 13022.3 12159.0 20480.2 17599.1 16037.199999999999 True False 10955.634517482795 12594.670039207462 11881.95563685669 13605.111490567586 14683.805076294702 15897.369359917147 15388.283346618511 13882.575485375806 15841.467400159027 13623.45108689422 12054.720635796808 0.9088252518229043 1.0447915318590844 0.9856682702022072 1.1286127569117488 1.2180958414490966 1.3187671319988532 1.2765358743298125 1.1516297975542573 1.314129781914429 1.1301341191133891 1.0 13.557310596892158 -6.343975487389444 3.1815583853497804 1.1787465293530779 0.9831600207425872 0.514283659528598 0.09230290470580728 0.2468574576773484 4.818400358972784 0.018423522980818913 0.047785739515567575 4.529231432385691e-07 6.343975487389444 -0.19558650861049065 NPS(ph)PPPPGRDKEEEEEVAGGDCIGSTVYSK ddPTM_A549_PD325901_60min_R1 2 NPSPPPPGRDKEEEEEVAGGDCIGSTVYSK 30 2 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 NPS(1)PPPPGRDKEEEEEVAGGDCIGSTVYSK;NPS(1)PPPPGRDKEEEEEVAGGDCIGSTVYSK 130.77 4.3446e-28 119161000.0 7074.3 8247.7 8221.1 7422.7 8427.1 7990.6 7073.1 9181.5 7939.200000000001 8751.4 8595.0 True False 7792.4777281755905 8942.76262430567 8779.03328349034 7881.183320825195 7835.209567916746 7925.527202874986 7342.270691048833 8998.367779752594 7605.543033311696 8198.835110476732 7537.869488194079 1.033777215217149 1.1863780128207253 1.164657108648563 1.0455452078559888 1.0394461697948425 1.051428021576662 0.9740511828373262 1.1937547862623477 1.0089778080163907 1.0876859997798936 1.0 12.879941100841698 -6.995062724036947 0.258121787426127 0.9891506275066627 1.1640258003128943 0.0006685913572961333 0.07329167895145645 3.7139303484000856 0.41070788143362696 0.05121896066899935 0.20461674231364646 1.0114333649865079e-07 6.995062724036947 0.17487517280623155 NPS(ph)PTTRPVSR ddPTM_A549_MK2206_60min_R1 2 NPSPTTRPVSR 11 1 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3;A0A0U1RQR2 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 NPS(0.446)PT(0.273)T(0.273)RPVS(0.007)R;NPS(0.972)PT(0.028)TRPVSR 81.632 0.00021422 202224000.0 1638.29 2152.3199999999997 2284.54 1988.67 2347.37 1974.78 2176.81 2061.91 3223.75 3131.76 5211.7 True False 1914.7932996550844 2261.8638946979895 2608.5221243705278 2475.89423927479 2002.074982542235 2183.749908847127 2572.308199914963 2354.192056834544 2493.575772270906 2424.2932408982183 3917.491054397412 0.4887805161688155 0.5773756374399454 0.6658654960915463 0.6320101832767635 0.5110605116238597 0.5574358380208302 0.6566213334495119 0.6009438245409512 0.6365236672262082 0.6188382327451474 1.0 11.935714264965245 -10.600530383340436 0.4720914253725684 1.0849744077893106 0.5744221294212815 0.07459808868410378 0.12374289680337361 0.3556025526737459 0.11107480807120068 0.08418312091703868 0.013761661297549067 2.5088206556636516e-11 10.600530383340436 -0.5105522783680292 NPS(ph)PTTRPVSR ddPTM_A549_PD325901_60min_R1 4 NPSPTTRPVSR 11 1 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3;A0A0U1RQR2 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 NPS(0.495)PT(0.495)T(0.009)RPVSR;NPS(0.701)PT(0.048)T(0.048)RPVS(0.202)R;NPS(0.858)PT(0.141)T(0.001)RPVSR;NPS(0.9)PT(0.047)T(0.047)RPVS(0.005)R 83.499 0.00016787 477554000.0 8175.9 7979.88 8763.310000000001 10234.6 10680.4 10512.5 9335.699999999999 10444.1 10956.4 9941.699999999999 16390.199999999997 True False 9005.911349220534 8652.372492991297 9358.040914663938 10866.767997536943 9930.24554937974 10426.889685408267 9690.975172191065 10235.784232262056 10495.940609907333 9313.979365338859 14374.309306038223 0.6265282844190236 0.6019330952727371 0.6510254312346612 0.7559854018844672 0.690832883720426 0.7253837011165635 0.6741871881190266 0.7120887699252656 0.7301874745034391 0.6479601326949553 1.0 13.811205014932145 -13.868225715864481 0.18909565962599068 1.8878654734984277 0.6177744741639686 0.0 0.1142011679151087 6.417647451225356 0.1069773861831218 2.174174229671349 0.04167797639757629 1.3544852627780182e-14 13.868225715864481 -1.2700909993344591 NPS(ph)PVVLGLDPK ddPTM_A549_PD325901_60min_R1 1 NPSPVVLGLDPK 12 0 B4DDX3;Q8TCB7 B4DDX3 METTL6 Methyltransferase-like protein 6 1 NPS(1)PVVLGLDPK 89.624 0.00027460000000000006 3411900.0 2581.3 2627.2 2444.3 3061.0 3766.1 3118.2 2871.3 3016.5 2791.6 2793.5 3138.0 True False 2843.3516757473753 2848.6033641592003 2610.18489676995 3250.0710179646107 3501.5821283396726 3092.806413035913 2980.5688927356487 2956.3335411015287 2674.278760050501 2617.117933258309 2752.0458934209455 1.0331774199495385 1.0350857051363445 0.9484525323541554 1.1809654140340633 1.2723560085646 1.1238207983484547 1.083037495799402 1.0742311922082965 0.9717420652190595 0.9509717623222796 1.0 11.426288813444373 -8.657768239876942 4.133131819887153 0.9866418845674464 1.09845191305246 0.30578999726495004 0.08006546295044359 0.22868775462570118 7.174990779744945 0.014817853498178836 0.016731278477280336 2.19903306800985e-09 8.657768239876942 0.11181002848501354 NPSDSAVHS(ph)PFTKR ddPTM_A549_PD325901_60min_R1 2 NPSDSAVHSPFTKR 14 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 NPSDS(0.001)AVHS(0.997)PFT(0.002)KR;NPS(0.004)DS(0.011)AVHS(0.908)PFT(0.077)KR 120.9 4.6681000000000004e-07 21634200.0 4795.700000000001 4235.5 3615.0 4418.6 4534.6 5735.7 4287.4 4638.1 5895.2 4817.5 5972.0 True False 5282.555933592255 4592.44044948854 3860.335638760943 4691.526886631307 4216.1053395207455 5688.990360865272 4450.559353155301 4545.58945698094 5647.445245110229 4513.3222278403055 5237.481859627114 1.0086060582495937 0.876841308967417 0.7370594767149765 0.8957600259765527 0.8049871011526355 1.0862071723280973 0.8497517456742393 0.8678959810859499 1.078274903182634 0.8617351522744241 1.0 12.354657626610816 -8.756404121746899 24.999051047639817 1.0369631513898148 0.887731103886008 0.05922743544109521 0.10416278092420395 97.9211515467249 486158.43601653265 0.01522563243363895 0.017005704763619678 1.7522492317823795e-09 8.756404121746899 -0.1492320475038068 NPSINQILLS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 NPSINQILLSPEK 13 0 Q14997-3;Q14997-2;Q14997 Q14997-3 PSME4 Proteasome activator complex subunit 4 1 NPSINQILLS(1)PEK;NPSINQILLS(1)PEK 109.83 5.940899999999999e-05 2311700.0 3427.3999999999996 3253.6 3930.1000000000004 3730.6 4295.6 3700.6 3879.2000000000003 4233.6 4591.9 3932.3 3982.5 True False 3775.347124881473 3527.792290510194 4196.82021961117 3961.0306891926734 3993.891875015509 3670.4635405300187 4026.825078779692 4149.157526805048 4398.918411762393 3684.0139069094816 3492.677747147519 1.0809319949327736 1.0100537598670114 1.201605336489668 1.1340956641154942 1.1435042578083057 1.0509024325326601 1.1529334711936745 1.1879588748757821 1.2594687315069373 1.0547820822915104 1.0 11.770117822888947 -5.7472861376534015 24.99609113231206 1.132547202915386 1.0454928736376226 0.17502839487965116 0.07216177213087979 413.2491237952854 729827.7440994099 0.01316754403502637 0.05052644067188554 1.7894264906541787e-06 5.7472861376534015 -0.08705432927776346 NPSINQILLS(ph)PEKIK ddPTM_A549_MK2206_60min_R1 1 NPSINQILLSPEKIK 15 1 Q14997-3;Q14997-2;Q14997 Q14997-3 PSME4 Proteasome activator complex subunit 4 1 NPSINQILLS(1)PEKIK 70.414 0.00054443 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NPSINQILLS(ph)PEKIK ddPTM_A549_PD325901_60min_R1 2 NPSINQILLSPEKIK 15 1 Q14997-3;Q14997-2;Q14997 Q14997-3 PSME4 Proteasome activator complex subunit 4 1 NPSINQILLS(1)PEKIK;NPSINQILLS(1)PEKIK 120.92 1.5166e-07 10016400.0 5144.4 5385.4 5649.6 6179.299999999999 6631.2 6963.9 6955.299999999999 7032.7 7317.9 6720.7 7424.6 True False 5666.655700892883 5839.246558062941 6033.015829804655 6560.981326791478 6165.447388398087 6907.188307273684 7219.987747586195 6892.427281453576 7010.354111682746 6296.353855038162 6511.4212684171935 0.8702640279747009 0.8967698935999505 0.9265282618200451 1.0076112504983619 0.946866610873849 1.06078043833166 1.1088190196825094 1.0585134945705945 1.0766242610788466 0.9669707419450515 1.0 12.668756764013233 -6.2842527714372824 0.9537160104207113 1.0446047958179934 0.8666704223915396 0.670959399461188 0.04275247604531399 0.3102632134924019 0.4593721019138078 0.006782444141479502 0.03914104531138933 5.196934324959388e-07 6.2842527714372824 -0.1779343734264538 NPT(ph)RWSTTAGFLK ddPTM_A549_MK2206_60min_R1 1 NPTRWSTTAGFLK 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NPT(0.616)RWS(0.311)T(0.07)T(0.003)AGFLK 80.53399999999999 0.00026828 6319400.0 1356.0 1771.0 1515.5 1351.8 2680.4 2132.7 1829.5 1997.3 2366.9 2040.7 2320.7 True False 1584.8596489829602 1861.1363354473956 1730.4206884027114 1682.9910606846088 2286.1167107044103 2358.3808984283164 2161.8964685684227 2280.423391474717 1830.8009291626238 1579.704452672297 1744.4061419383463 0.9085382187555808 1.066916866836608 0.9919826849955398 0.9647931294340122 1.3105415394628954 1.3519677795950287 1.2393309199004368 1.3072777816184251 1.0495267616567077 0.9055829457909176 1.0 10.768520259836754 -3.8314297022100448 13.340376403157048 1.0815915001539458 0.5270463017954535 0.0 0.16288205128840125 0.0 0.0 0.022101415514736305 0.0 0.00014742471530995694 3.8314297022100448 -0.5545451983584923 NPTRWS(ph)TTAGFLK ddPTM_A549_MK2206_60min_R1 1 NPTRWSTTAGFLK 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NPT(0.406)RWS(0.553)T(0.029)T(0.012)AGFLK 45.14 0.014519999999999998 6385900.0 1126.7 1429.5 759.54 1271.7 2229.1 1636.6 1353.0 1384.7 2126.8 1648.3 2046.8 True False 1316.859414829721 1502.2554441118318 867.254193117385 1583.2665570887816 1901.2023428709142 1809.7839257128426 1598.8225864843255 1580.9854654658996 1645.0831958017104 1275.9478852059322 1538.5230711937802 0.8559243858513836 0.9764269852295374 0.5636926799183192 1.0290821026559476 1.2357320981840862 1.1763125035938422 1.039193117360117 1.027599452401563 1.0692613108006548 0.8293329551541212 1.0 10.587330362683424 -6.488541073754294 24.96016511105743 1.059095088590429 0.81311108535962 0.4171306393884837 0.13260654085391796 387.34613798206055 281563.0069547582 0.015762644426432684 0.03661043134600516 3.2468253360066076e-07 6.488541073754294 -0.24598400323080893 NPTRWS(ph)TTAGFLK ddPTM_A549_PD325901_60min_R1 2 NPTRWSTTAGFLK 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NPT(0.042)RWS(0.893)T(0.064)TAGFLK;NPT(0.376)RWS(0.612)T(0.012)TAGFLK 103.5 3.4094e-05 20558700.0 6540.9 5989.1 6548.1 7042.5 6032.4 8314.3 6924.9 6390.7 8363.7 7582.200000000001 9068.8 True False 7204.927352843915 6493.822475748278 6992.493442924075 7477.499230322043 5608.705034650236 8246.59109739738 7188.430858950684 6263.232475092838 8012.202774550218 7103.458598013652 7953.395091859739 0.9058933033790969 0.8164843316277187 0.8791834634344844 0.9401644384516025 0.7051963306073802 1.0368642576096496 0.9038191584758574 0.7874916815717135 1.0073940351272965 0.8931353863313048 1.0 12.95735512450693 -8.787350129734442 24.991272620332975 1.0034916606286397 0.8735667638869025 0.15630809149374247 0.0875499577610352 165.96808670539667 160077.71072408944 0.013065137326407789 0.013911201767914164 1.631735906256574e-09 8.787350129734442 -0.12992489674173724 NPVSLPSLPNPTKPNNVPSVPS(ph)PSIQR ddPTM_A549_MK2206_60min_R1 2 NPVSLPSLPNPTKPNNVPSVPSPSIQR 27 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 NPVSLPSLPNPT(0.001)KPNNVPS(0.12)VPS(0.73)PS(0.149)IQR;NPVSLPSLPNPTKPNNVPS(0.003)VPS(0.805)PS(0.193)IQR 85.619 2.0764e-07 6598800.0 2113.35 3390.4 2445.2 3276.7 3638.3 2694.9 2649.3999999999996 2435.5 4182.7 4469.4 4218.1 True False 2470.0318135532 3562.9568784307476 2791.966128196842 4079.4916470966514 3103.1108896268665 2980.072529270157 3130.7616856109184 2780.739583405936 3235.325128399388 3459.7594358668907 3170.629356362365 0.7790351806958118 1.1237380589065435 0.8805715882855636 1.2866504370529819 0.9787050269373139 0.9398993683352405 0.9874259441043004 0.8770307944780572 1.020404709843237 1.0911901225301976 1.0 11.63055352224537 NPVSLPSLPNPTKPNNVPSVPS(ph)PSIQR ddPTM_A549_PD325901_60min_R1 2 NPVSLPSLPNPTKPNNVPSVPSPSIQR 27 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 NPVSLPSLPNPTKPNNVPS(0.005)VPS(0.968)PS(0.028)IQR;NPVSLPSLPNPTKPNNVPS(0.035)VPS(0.805)PS(0.16)IQR 120.43 4.1305000000000005e-18 11829500.0 3220.6000000000004 2723.5 3515.5 4060.1 4374.6 4024.8 4286.7 3828.2999999999997 4538.6 2946.0 4181.299999999999 True False 3547.5529411195907 2953.0189031240825 3754.0829704188354 4310.88315584388 4067.3431875507126 3992.0233632181894 4449.832714272245 3751.9415532567486 4347.858425406648 2759.989057232493 3667.026607444551 0.9674194711098052 0.8052897399569073 1.0237403139637844 1.1755800045443396 1.1091665327143976 1.088626778740534 1.2134716190055708 1.0231563484267634 1.1856631791489918 0.7526504039074461 1.0 11.840395018747946 -5.954100260105566 5.778272977720481 1.1001858478714226 0.8891602038652959 0.2035659010652483 0.12652139629793374 0.11103326247872769 8.738911921217104 0.011232397619822549 0.03555685712703092 1.1114751053809735e-06 5.954100260105566 -0.21102564400612667 NPYLLS(ph)EEEDDDVDGDVNVEK ddPTM_A549_PD325901_60min_R1 2 NPYLLSEEEDDDVDGDVNVEK 21 0 G3V5V3;O60524-4;O60524-5;O60524-3;O60524 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 NPYLLS(1)EEEDDDVDGDVNVEK;NPYLLS(1)EEEDDDVDGDVNVEK 134.76 3.2185000000000006e-18 16536300.0 3745.3 4011.8999999999996 3321.6 3483.6 4281.6 3474.6 3371.6000000000004 3688.0 3752.1 4179.6 3894.9 True False 4125.520098855866 4349.996892764273 3547.0237504034135 3698.774060170373 3980.875186718131 3446.3040095999577 3499.908083010314 3614.4399468199713 3594.412285279225 3915.6993427050015 3415.851991805365 1.2077572765895586 1.2734734710988425 1.0384008905868083 1.0828262082325988 1.1654120835060353 1.0089149113801321 1.0246076502748362 1.0581371662153451 1.0522740135996018 1.1463316771624683 1.0 11.738029749282532 -2.000000000000016 0.2988418173304701 1.0166083119060485 3.026645485283307 0.3984097188114989 0.06617459968535776 21.035644490263753 0.26299932339051213 0.01716813430296741 22.95906130119625 0.009999999999999632 2.000000000000016 2.010037173377259 NPYLLS(ph)EEEDDDVDGDVNVEKNETEPPKGK ddPTM_A549_MK2206_60min_R1 2 NPYLLSEEEDDDVDGDVNVEKNETEPPKGK 30 2 G3V5V3;O60524-4;O60524-5;O60524-3;O60524 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 NPYLLS(1)EEEDDDVDGDVNVEKNETEPPKGK;NPYLLS(1)EEEDDDVDGDVNVEKNETEPPKGK 198.45 4.551299999999999e-78 33853000.0 3789.44 4351.4 4741.5 4241.6 6261.799999999999 4553.4 4843.9 4680.7 8323.7 7020.8 7092.1 True False 4429.004829087013 4572.867673667869 5413.915997401159 5280.792190412663 5340.6975149563 5035.237765697702 5723.973929542817 5344.203559042565 6438.39524021756 5434.796403842631 5330.935837997563 0.8308118806304488 0.8577982952024341 1.0155657771778333 0.990593837722171 1.001831137581728 0.9445316767475985 1.0737277850436275 1.0024888164945511 1.207742024266416 1.0194826141227917 1.0 12.380173102885685 -5.232452807549081 0.4336216159529157 1.089342691765994 0.6254953249666559 0.48836839310849656 0.06852484022759646 3.2107918583311372 0.3909374810902385 0.019724771408519796 0.7689243539571314 5.855273589799012e-06 5.232452807549081 -0.46384736679933813 NQAAIQGRPPYAAS(ph)AEEVAK ddPTM_A549_MK2206_60min_R1 1 NQAAIQGRPPYAASAEEVAK 20 1 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A494C0Y9;A0A0C4DG79 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 NQAAIQGRPPYAAS(1)AEEVAK 114.15 1.2119e-14 11799000.0 4448.0 4469.9 5576.2 4146.9 7806.6 4964.8 4736.8 4207.5 7764.7 8322.7 9072.9 True False 5198.713656840858 4697.3988175134455 6366.9890086909945 5162.890686161417 6658.259481340488 5490.171840632487 5597.415245867668 4803.926009928339 6006.007847677988 6442.596289633818 6819.848530698677 0.7622916599158343 0.688783452648355 0.9335968357700039 0.757038908257467 0.9763060647709672 0.8050284131559785 0.8207536018830357 0.7044036225004235 0.880665871190938 0.9446831935684926 1.0 12.735523981912038 -9.701768188585545 0.8877797265929648 0.9834820485084158 0.8117318396682082 0.3389525992844954 0.08534966146807942 0.3603550538047405 0.5944280596597595 0.02830622786326306 0.017160355541862723 1.9871553092936449e-10 9.701768188585545 -0.17175020884020764 NQAAIQGRPPYAAS(ph)AEEVAK ddPTM_A549_PD325901_60min_R1 2 NQAAIQGRPPYAASAEEVAK 20 1 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A494C0Y9;A0A0C4DG79 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 NQAAIQGRPPYAAS(1)AEEVAK;NQAAIQGRPPYAAS(1)AEEVAK 199.46 2.1624000000000003e-55 31464000.0 10731.6 10163.8 10788.5 11846.7 13940.099999999999 13696.0 11196.8 12812.9 13969.0 12002.4 14304.8 True False 11821.064131813637 11020.339095859206 11520.672486520727 12578.4437531922 12960.99546673425 13584.464316894324 11622.90035112405 12557.336657974394 13381.931508506035 11244.566415657597 12545.400285598442 0.9422628104886928 0.8784366257735166 0.9183184453465342 1.0026339109826323 1.033127295397094 1.0828243027437459 0.926467078493033 1.0009514540870932 1.066680313410796 0.8963098952343399 1.0 13.614870883045418 -6.30327122949668 3.274561350936675 1.0255714044745536 0.9071949106533989 0.26614694907986947 0.056340877488796286 0.1341840857341775 2.9147879110894848 0.006185341226296128 0.01637108685032194 4.974263307846669e-07 6.30327122949668 -0.11837649382115478 NQAS(ph)DS(ph)ENEELPKPR ddPTM_A549_PD325901_60min_R1 2 NQASDSENEELPKPR 15 1 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 2 NQAS(1)DS(1)ENEELPKPR;NQAS(1)DS(1)ENEELPKPR 82.48200000000001 8.1633e-05 27278000.0 7579.900000000001 8082.5 7443.700000000001 7850.6 8992.900000000001 6809.2 6166.4 7054.6 8546.1 8515.4 9623.0 True False 8349.405867972544 8763.640640536212 7948.874244604377 8335.513731993786 8361.269727820787 6753.748132783062 6401.065726383551 6913.890468773365 8186.9371368633 7977.736190752747 8439.432005222996 0.989332678171382 1.038415930730003 0.9418731307610485 0.9876865797171068 0.9907384433746447 0.8002609806682845 0.7584711533219367 0.8192364681052583 0.9700815329511 0.9452930227787232 1.0 13.042930189895175 -6.0829000830873925 1.4202311212622585 0.942866045397426 1.0115972072379045 0.08553485598373589 0.08537817625127343 1.2316038242395844 4.398967698114032 0.015174465644255978 0.07697665995065578 8.262280156731173e-07 6.0829000830873925 0.06873116184047845 NQAS(ph)DSENEELPKPR ddPTM_A549_MK2206_60min_R1 2 NQASDSENEELPKPR 15 1 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 1 NQAS(0.594)DS(0.406)ENEELPKPR;NQAS(0.75)DS(0.25)ENEELPKPR 122.57 1.1155999999999999e-07 7576800.0 2706.3999999999996 3639.9 3210.8 2460.2 3898.8 3442.0 2774.3 3439.6000000000004 3900.0 3499.5 4550.200000000001 True False 3163.1741548727737 3825.155362730081 3666.139720437764 3062.949110442576 3325.291684709129 3806.230155385317 3278.3543988791353 3927.1738333332164 3016.6562270202503 2708.960519491694 3420.2597608686447 0.9248344792587979 1.1183815353716307 1.0718892647810683 0.8955311364025397 0.9722336656279591 1.1128482692842743 0.9585103553791278 1.1482092320192168 0.8819962336001371 0.7920335614519811 1.0 11.7398901833071 -8.796412012272464 24.999980200570164 0.9442760230902862 1.024557177915576 0.23883198763211055 0.0943795710009511 242.4078442624671 173282.71151665418 0.014650665989254155 0.015596359042114705 1.5980412581919799e-09 8.796412012272464 0.08028115482528975 NQATSATSEKDNDDDQS(ph)DKGTYTIELENPNSEEVEAR ddPTM_A549_PD325901_60min_R1 1 NQATSATSEKDNDDDQSDKGTYTIELENPNSEEVEAR 37 2 H0Y2V6;Q5SW79;H0YB66 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 NQATSATSEKDNDDDQS(0.999)DKGT(0.001)YTIELENPNSEEVEAR 264.57 5.609899999999997e-181 38158000.0 1854.9 1607.3 1370.3 1674.6 1759.0 1573.4 1901.4 1991.6 1855.4 2089.6 1940.4 True False 2043.2080824947916 1742.752811819841 1463.296798283296 1778.0362387074604 1635.453908220569 1560.586752059108 1973.758817486003 1951.8759756200238 1777.4239903273033 1957.6622993866324 1701.7431012090515 1.2006560103244355 1.0240986495444895 0.8598811402518133 1.0448323471646246 0.9610462983858225 0.9170519045738131 1.159845346858577 1.1469862720367476 1.044472569957523 1.1503865054577016 1.0 10.73279754578373 -7.720497559874663 24.999996540737545 1.0424546869329996 0.9960254643338156 0.08277197982270301 0.09963696482649231 407.4805272613358 248816.05522734998 0.014794587643050307 0.021943798128578502 1.903278931302129e-08 7.720497559874663 -0.04642922259918403 NQEASLGMKT(ph)PEAPAHSEKPR ddPTM_A549_PD325901_60min_R1 2 NQEASLGMKTPEAPAHSEKPR 21 2 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 NQEAS(0.001)LGMKT(0.999)PEAPAHSEKPR;NQEASLGMKT(1)PEAPAHSEKPR 101.45 3.5532999999999995e-10 42007000.0 3697.2 4209.6 4764.1 4599.6 4332.0 5045.3 3903.6000000000004 4459.2 4562.3 4598.5 5616.200000000001 True False 4072.5370222652136 4564.357765592484 5087.420474860579 4883.7068455504805 4027.7352645886886 5004.212749563884 4052.153634131884 4370.25775782527 4370.562396825619 4308.149925215081 4925.443004025083 0.8268366965036703 0.9266897945753266 1.0328858684798765 0.9915264153010206 0.8177407110989234 1.015992418443261 0.8226983097399473 0.8872821702035505 0.8873440202747216 0.874672577003622 1.0 12.266037773894528 -10.856395263898081 1.1310836088801912 0.9994814051318311 0.913547356153591 0.0 0.08087522705212521 0.7210734122655981 1.65340719832231 0.04780936602765296 0.011935050033359998 1.3918894276972365e-11 10.856395263898081 -0.0859340489782402 NQEGHAS(ph)DEAR ddPTM_A549_PD325901_60min_R1 1 NQEGHASDEAR 11 0 Q5JXR5;Q5JXR6;Q9P2E3-2;Q9P2E3 Q5JXR5 ZNFX1 NFX1-type zinc finger-containing protein 1 1 NQEGHAS(1)DEAR 46.068999999999996 0.038288 1011100.0 0.0 302.93 307.84 235.75 338.69 288.92 278.11 417.8 367.48 206.63 315.62 True False 0.0 328.4589742329274 328.7318735923009 250.31174207290326 314.90158281706925 286.5671313111208 288.69362823763146 409.46665124224063 352.0360935461234 193.58334653630357 276.80074088002505 0.0 1.186626066059891 1.1876119715112488 0.9043030061158578 1.1376471819255658 1.035283107986076 1.0429655185163005 1.4792830754008623 1.2718032922415767 0.6993599291708877 1.0 8.11270399424686 -5.2598390332175144 24.999999999866535 1.134386147203712 2.6685947104608308e-05 0.7178212425860917 0.19582804826214248 43.47983079401072 679162.5406284193 0.02176455423411461 0.1913009262826066 5.497445932807649e-06 5.2598390332175144 -1.1343594612566075 NQEIQQGEDAFPPS(ph)SPLFAEPYK ddPTM_A549_MK2206_60min_R1 1 NQEIQQGEDAFPPSSPLFAEPYK 23 0 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 NQEIQQGEDAFPPS(0.5)S(0.5)PLFAEPYK 73.805 1.5579e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NQEIQQGEDAFPPS(ph)SPLFAEPYK ddPTM_A549_PD325901_60min_R1 1 NQEIQQGEDAFPPSSPLFAEPYK 23 0 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 NQEIQQGEDAFPPS(0.499)S(0.499)PLFAEPY(0.001)K 51.645 0.0026236000000000002 1309900.0 715.28 817.37 779.21 767.7 1009.6 911.1 1219.7 1052.8 920.14 844.28 957.27 True False 787.8946990386949 886.2526384602642 832.0918763703775 815.1190854267993 938.6891789309187 903.6803036742423 1266.1163509454493 1031.8010780943778 881.4697156730438 790.972016714274 839.5318586345024 0.9384929123716694 1.0556509909007539 0.991137939331777 0.9709209686843684 1.118110253085208 1.076409780498476 1.508121863302229 1.229019563084361 1.0499538601271823 0.9421584286280559 1.0 9.71344126350392 -6.758286158898565 24.983610661544173 1.0866866368621537 0.9939569468317244 0.1371795889366444 0.14651486753767545 191.08442245704347 1513974.5965602554 0.023038245697359943 0.04641885745522666 1.744672200497544e-07 6.758286158898565 -0.0927296900304293 NQGETPTTEVPAPFFLPAS(ph)LSANNTPTRR ddPTM_A549_MK2206_60min_R1 1 NQGETPTTEVPAPFFLPASLSANNTPTRR 29 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 NQGETPTTEVPAPFFLPAS(0.425)LS(0.425)ANNT(0.075)PT(0.075)RR 45.408 0.010440999999999999 2340200.0 463.69 583.94 636.36 511.69 1054.9 508.7 499.41 478.85 914.02 822.55 827.16 True False 541.9495358679267 613.6600517905998 726.6054168736065 637.054072970637 899.72560741758 562.5302963522693 590.1463325322527 546.7284539166217 706.9959293900131 636.7353837142144 621.7533435453622 0.8716471595916505 0.9869831150265911 1.1686393397265171 1.0246090022419936 1.4470780362630047 0.9047483253481337 0.9491647108274802 0.8793333555700182 1.137100325602723 1.0240964368336511 1.0 9.28019855048525 -11.347915634545187 1.9938074475556578 0.9995743599758414 1.060777481521931 0.0 0.15937634268239007 1.5903538749453399 11.416816379193794 0.12290035971769137 0.023362142762213486 4.4883257106923645e-12 11.347915634545187 0.061203121546089645 NQGGYDRYS(ph)GGNYR ddPTM_A549_MK2206_60min_R1 4 NQGGYDRYSGGNYR 14 1 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGYDRYS(1)GGNYR;NQGGYDRY(0.001)S(0.999)GGNYR;NQGGYDRYS(1)GGNYR;NQGGYDRYS(1)GGNYR 168.42 5.0726000000000004e-23 174851500.0 10607.199999999999 11376.53 11601.5 11265.499999999998 17033.7 14691.8 12819.5 14812.0 18346.800000000003 16429.6 17816.1 True False 12397.436038858448 11955.54678391156 13246.767150448082 14025.548005727516 14528.065294405942 16246.47652437245 15148.637211704228 16911.64635984755 14191.279093819265 12718.141949147239 13391.870670654445 0.9257434113387087 0.8927465832021291 0.9891648057411182 1.0473180596390947 1.0848421144210447 1.213159604354102 1.1311815641185499 1.26282927723503 1.0596935590870482 0.9496912165539692 1.0 13.709069880075253 -6.064367551377562 2.2218388551873245 1.0718183687308267 0.9079631541734482 0.4009934300070568 0.08613670856735074 0.2908476692428041 2.766541108532842 0.013419525096298847 0.049881733276553236 8.622485021787931e-07 6.064367551377562 -0.1638552145573785 NQGGYDRYS(ph)GGNYR ddPTM_A549_PD325901_60min_R1 4 NQGGYDRYSGGNYR 14 1 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGYDRYS(1)GGNYR;NQGGY(0.005)DRY(0.074)S(0.92)GGNY(0.001)R;NQGGYDRYS(1)GGNYR;NQGGYDRY(0.002)S(0.998)GGNYR 166.62 1.2107000000000001e-20 178285900.0 16827.6 17080.8 16420.399999999998 18872.600000000002 20090.300000000003 18382.100000000002 16684.9 17483.7 18975.6 18235.6 19093.399999999998 True False 18535.925564175628 18520.25896107281 17534.787087886627 20038.317639215573 18679.226635772426 18232.402272165826 17319.852999827606 17134.973887802684 18178.12152142652 17084.20110389303 16745.032843034885 1.1069506842971446 1.1060150872607175 1.0471634933329044 1.196672340212849 1.1155085099484932 1.0888245154890581 1.0343278010966588 1.023286968047363 1.0855829123672176 1.0202548579054727 1.0 14.031445585240963 -7.60956372548289 3.3757412780835656 1.039449806436533 1.1141889758404617 0.5128585067532414 0.03791237870811376 0.19075606049009697 4.346507122198385 0.006745612249534314 0.010311903706770126 2.4571760550948206e-08 7.60956372548289 0.07473916940392877 NQGGYDRYS(ph)GGNYRDNYDN ddPTM_A549_MK2206_60min_R1 2 NQGGYDRYSGGNYRDNYDN 19 2 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGYDRYS(1)GGNYRDNYDN;NQGGYDRYS(1)GGNYRDNYDN 212.0 1.1398999999999997e-66 132571000.0 5003.799999999999 6075.0 5768.9 4837.8 9321.7 6972.3 5934.3 4940.1 9445.8 8781.2 8473.2 True False 5848.319108835497 6384.191551577035 6587.0167662991835 6023.061217177097 7950.490278381317 7710.104158161836 7012.485495176599 5640.374303421749 7306.341381843048 6797.520821191737 6369.070591576679 0.9182374452828495 1.002374123474209 1.0342194628853298 0.9456734904371775 1.2482967748694953 1.2105540435301063 1.1010217887129181 0.8855882851858076 1.1471597428211806 1.0672704476194217 1.0 12.636867146821732 -5.642337782840317 1.1742823828108135 1.0762022512614222 0.9095343163989555 0.18967546570005434 0.10072543309342362 1.280718795423718 2.208144161241474 0.015953769799526524 0.21972628898224966 2.2785691713821933e-06 5.642337782840317 -0.16666793486246667 NQGGYDRYS(ph)GGNYRDNYDN ddPTM_A549_PD325901_60min_R1 2 NQGGYDRYSGGNYRDNYDN 19 2 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGYDRYS(1)GGNYRDNYDN;NQGGYDRYS(1)GGNYRDNYDN 211.68 1.1797999999999999e-66 166857000.0 9720.1 10464.5 10205.7 10301.6 10967.7 11497.9 10412.7 11938.4 11452.7 12218.1 12603.3 True False 10706.877396440583 11346.38014016595 10898.320173859625 10937.906435368903 10197.366588510931 11404.264914516589 10808.960996548078 11700.279246506378 10971.38284683708 11446.647080846013 11053.173998901271 0.9686699401913774 1.026526872850624 0.9859901033805277 0.9895715417540856 0.9225736055113752 1.0317638097120536 0.9779056221880277 1.0585447444932496 0.9926002112992772 1.0355981984888551 1.0 13.432173088980552 NQGGYGGSS(ph)SSSSYGSGR ddPTM_A549_PD325901_60min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGS(0.057)S(0.291)S(0.057)S(0.291)S(0.291)S(0.012)Y(0.002)GS(0.001)GR 65.225 0.0022858 1473000.0 340.13 357.93 419.38 282.67 508.36 547.15 520.65 276.56 345.0 393.89 417.04 True False 374.6597472095278 388.0940172554443 447.84164873680874 300.1298839098519 472.65454734679304 542.6941918070046 540.4636206606119 271.04379384287716 330.50084976981765 369.01971817831213 365.7467238343755 1.0243693867759387 1.0611004609604886 1.224458401272267 0.8205948662051791 1.2923001534822487 1.483797820845985 1.4776991438079297 0.7410696424053725 0.9036331106535939 1.0089488001686622 1.0 8.514701131297562 -8.273870100261721 24.957423808397987 0.9372151297239038 1.1936620244364284 0.331819157601255 0.1929752643069777 765.0897512660234 1536084.1716724618 0.03316538579086908 0.04023967547616867 5.322674394192255e-09 8.273870100261721 0.2564468947125247 NQGGYGGSSSS(ph)SSYGSGR ddPTM_A549_MK2206_60min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGSS(0.004)S(0.055)S(0.705)S(0.212)S(0.024)YGSGR 335.48 1.1534999999999997e-195 90623000.0 7616.8 9069.7 9645.1 8675.1 13497.0 10809.0 9706.7 11021.0 17762.0 14901.0 14383.0 True False 8902.329627119037 9531.308990179135 11012.92021228176 10800.499889440032 11511.609179367782 11952.801205566497 11470.281744440068 12583.260500396962 13738.93536008557 11534.853750806053 10811.304149394251 0.8234279143481342 0.8816058505497847 1.0186486348086699 0.9990006515583206 1.0647752593300939 1.1055836595103286 1.0609526460397232 1.1638984831540413 1.2707935296460373 1.0669252840742938 1.0 13.400252942990063 -5.728047656499377 0.6630172667824038 1.1286593969084433 0.7264722842054672 0.6649711717232994 0.06768182367998656 1.178851322633686 0.5021899285826312 0.017033373313728593 0.3152470523712467 1.8704768757935204e-06 5.728047656499377 -0.40218711270297614 NQGGYGGSSSS(ph)SSYGSGR ddPTM_A549_PD325901_60min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGS(0.003)S(0.003)S(0.047)S(0.473)S(0.473)SYGSGR 272.43 7.330399999999999e-101 152890000.0 9074.5 9283.5 10193.0 11959.0 11038.0 11303.0 10961.0 11798.0 13467.0 12067.0 12354.0 True False 9995.73655970618 10065.85312544608 10884.758275488322 12697.680269140401 10262.728959032773 11210.95211549771 11378.126853089341 11562.679634648042 12901.028822754002 11305.087560632894 10834.536318458364 0.9225809269453318 0.929052506686169 1.0046353582242737 1.1719634228839009 0.9472236427458898 1.0347422156311443 1.0501720164715203 1.06720576633715 1.190731974452385 1.043430676527695 1.0 13.403349791829685 -5.188313991499015 0.638377807466279 1.0827763106083201 0.7685043155711927 0.30957864107465827 0.06997629384052324 3.1955439708164035 0.8286454576537605 0.014477480940080546 0.7466087946432735 6.481656454333155e-06 5.188313991499015 -0.31427199503712744 NQGGYGGSSSSS(ph)SYGSGR ddPTM_A549_MK2206_60min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGSSS(0.005)S(0.06)S(0.855)S(0.079)YGSGR 320.03 6.092399999999997e-173 131790000.0 5985.2 8248.0 6739.3 8241.7 10415.0 8730.9 6083.9 9254.7 13371.0 13142.0 11085.0 True False 6995.355435909158 8667.787969943609 7695.034078094621 10260.916869983968 8882.967296667079 9654.79804289763 7189.265878722836 10566.582066330082 10342.489849099431 10173.213072484607 8332.288569563732 0.8395479078175307 1.0402649761321747 0.9235198725837603 1.2314644151266134 1.0660897330314352 1.1587210359186038 0.8628200786256801 1.2681488378748427 1.24125440000705 1.2209386397928441 1.0 13.024497089315414 -4.7390111553667165 0.7780397744571251 1.1145641869983274 0.43581857044074473 0.3105864873817915 0.12466722124872384 5.207355153326618 1.284822498442639 0.02043236462117039 3.713525029514285 1.8238488540059854e-05 4.7390111553667165 -0.6787456165575827 NQGGYGGSSSSS(ph)SYGSGR ddPTM_A549_PD325901_60min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGSSS(0.005)S(0.008)S(0.976)S(0.01)YGSGR 282.33 4.8886999999999985e-116 126040000.0 7543.4 7882.6 9556.9 9594.9 9194.4 9573.9 10142.0 9911.8 10506.0 10666.0 9662.2 True False 8309.200414842426 8546.894365987102 10205.488704308278 10187.555181401056 8548.617062958047 9495.933332616425 10527.959359915349 9714.10137334332 10064.469355599138 9992.546939729058 8473.81065373227 0.9805742368320041 1.0086246572222668 1.2043564721160362 1.2022401252161532 1.0088279538312352 1.1206213733881303 1.242411447472966 1.1463675281751506 1.1877146855017662 1.1792270736339696 1.0 13.048795176878947 -5.607308943062496 8.370873604642343 1.1145076145546096 0.9875691972299545 0.30220332409590356 0.07808530581032126 0.27167751955649266 23.332675592075393 0.012704313189336706 0.049584121402265716 2.4699664655723663e-06 5.607308943062496 -0.12693841732465505 NQGGYGGSSSSSS(ph)YGSGR ddPTM_A549_MK2206_60min_R1 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGSSSSS(0.043)S(0.957)YGSGR;NQGGYGGSSSSS(0.021)S(0.979)YGSGR 186.94 7.977999999999999e-40 29578000.0 2066.6000000000004 2513.0 2310.4 2138.8 2936.3 2609.3 2403.8199999999997 2686.3 3848.7999999999997 3363.6 4154.3 True False 2415.391556480963 2640.90096610915 2638.049461224432 2662.8060960143807 2504.37415969309 2885.414394086841 2840.5629784499283 3067.0912514487213 2977.0529452706533 2603.7604238783438 3122.672657152787 0.7735013629905372 0.8457181575084113 0.8448049958684339 0.8527330233974295 0.8019970181493651 0.9240207703095351 0.909657620353943 0.9822006941468069 0.9533669622563296 0.8338243260670234 1.0 11.608565627426193 -7.650377560047267 0.6803991788077711 0.9844424652887014 0.8138788717347375 0.4299797414730838 0.05367776430827495 0.1823471933863634 0.16982106412830186 0.00613350899066314 0.012796937225755077 2.2367757204596336e-08 7.650377560047267 -0.1705635935539639 NQGGYGGSSSSSS(ph)YGSGR ddPTM_A549_PD325901_60min_R1 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGSSSSS(0.002)S(0.998)YGSGR;NQGGYGGSSSSS(0.001)S(0.999)YGSGR 247.91 4.400599999999999e-76 44475000.0 4360.6 4058.8 4965.700000000001 5312.7 5641.1 5505.1 4796.6 5542.7 5889.9 5573.2 5119.6 True False 4803.284901895944 4400.84932035984 5302.702263179867 5640.853412982873 5244.888596738522 5460.268290810091 4979.137237800234 5432.146500335964 5642.367985678979 5221.307200871738 4489.921655818312 1.0697925866193139 0.98016171722216 1.181023338415784 1.2563367126179394 1.168147018766325 1.216116607231742 1.1089586009475172 1.209853292940348 1.2566740398169882 1.1628949458629536 1.0 12.132474556410582 -5.76529137362411 24.999970149360166 1.1500141971126154 1.0249771401486996 0.3404408377080248 0.07403562598958402 115.17965088557003 747557.419336819 0.014301427396399955 0.04705568398376356 1.716756207387091e-06 5.76529137362411 -0.12503705696391587 NQGGYGGSSSSSSYGSGR ddPTM_A549_MK2206_60min_R1 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 240.2 4.988399999999999e-74 18261800.0 2135.31 2400.2 2705.0 2390.6000000000004 3162.6000000000004 2520.7 2777.6 2591.8 4346.8 3851.0 3624.6 False True 2495.698124682748 2522.359927916904 3088.609674780163 2976.2971073181134 2697.385729470887 2787.4388008947585 3282.253966163241 2959.1955870546108 3362.2567404132387 2981.056425364342 2724.511786129069 0.916016637325172 0.925802538553383 1.1336378467895698 1.0924148401452782 0.9900437000139675 1.0230966204976837 1.2047127059144054 1.08613792831448 1.2340767830519335 1.09416169184563 1.0 11.411782016631099 -7.629438456420991 11.230707792273327 1.11752906030672 1.016948527196179 0.30511029062247386 0.08260551025282425 0.5225185036466943 51.619242336898026 0.016060157146301046 0.023822526668992604 2.3472618680202763e-08 7.629438456420991 -0.10058053311054116 NQGGYGGSSSSSSYGSGR ddPTM_A549_PD325901_60min_R1 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 243.04 3.196899999999999e-74 28118000.0 3576.3 3879.7 3547.4 3894.3 4651.4 4400.0 4591.6 4621.0 4837.9 4601.1 4474.700000000001 False True 3939.3633432670904 4206.655934808335 3788.1478962491205 4134.842066403 4324.70171045887 4364.16785881535 4766.335850619931 4528.83052989563 4634.579887250434 4310.585760771361 3924.340267460391 1.003828178695733 1.071939650516249 0.9652954733970084 1.053640047650311 1.1020200634277748 1.1120768234604668 1.21455723147688 1.154036149068804 1.180983189882683 1.0984230385202876 1.0 11.93823442328722 -6.625039360173807 3.665744779762924 1.1055433907886152 1.0181003066662055 0.3925399028285135 0.05814491096471109 0.29977052008031346 7.75774550768417 0.011572323212459925 0.025333748201764518 2.3711587974469993e-07 6.625039360173807 -0.08744308412240964 NQGIEGS(ph)PGGR ddPTM_A549_MK2206_60min_R1 2 NQGIEGSPGGR 11 0 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 NQGIEGS(1)PGGR;NQGIEGS(1)PGGR 75.73899999999999 0.0012927 22700000.0 1310.38 1177.75 1245.66 1146.9499999999998 1896.92 1491.2 1488.58 1121.4 1930.78 2141.2 2260.3 True False 1531.5401082848755 1237.6924444230206 1422.3133188490417 1427.9528014885414 1617.8855808347296 1648.997794221552 1759.0357175083795 1280.3618841434684 1493.4614128220924 1657.5014328720147 1699.0051288935415 0.9014334814176072 0.7284806993072789 0.8371448058990308 0.8404640911346042 0.9522546773524809 0.9705666958730395 1.03533278834416 0.7535950671186555 0.8790211326758577 0.9755717653138837 1.0 10.730474492344968 -13.808076529857154 0.018373739651996502 2.0360699877476844 2.6296461165550118e-06 0.23277549765572192 0.0837089893233671 2414.509908786582 4.237746749349788 291.76481489477777 188.17808200623944 1.555691468931219e-14 13.808076529857154 -2.036067358101568 NQGIEGS(ph)PGGR ddPTM_A549_PD325901_60min_R1 2 NQGIEGSPGGR 11 0 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 NQGIEGS(1)PGGR;NQGIEGS(1)PGGR 100.38 0.00026839 36443000.0 2246.75 2095.49 1970.4299999999998 2127.8999999999996 2428.4 2130.76 1807.7 1983.6 1941.17 2533.6 2565.4 True False 2474.838406030069 2272.0842964227945 2104.155228958153 2259.335550188465 2257.837561525203 2113.4077970112266 1876.493012711396 1944.0355418959043 1859.5893755005122 2373.62806361312 2249.8720634104807 1.0999907267076208 1.0098726649277308 0.9352332797841661 1.0042062332929451 1.0035404226952567 0.9393457660910755 0.8340443188875833 0.8640649277403923 0.826531164035009 1.0550057944250586 1.0 11.135627251112872 -7.3694413800392065 3.777674131535599 0.9048196776180187 1.0061860446745223 0.27294648796833687 0.072929739489417 0.2482642222780334 6.406510582004721 0.011653394119438549 0.019090849155576194 4.27128568274072e-08 7.3694413800392065 0.10136636705650359 NQIHVKS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 NQIHVKSPPR 10 1 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 NQIHVKS(1)PPR 51.875 0.010246 4915200.0 666.73 688.6 668.17 699.18 968.01 341.45 674.06 665.09 895.25 821.04 970.98 True False 779.2577240165261 723.646798751596 762.9265531969913 870.4791313873831 825.617011315093 377.58201236383354 796.527976826035 759.3685442527009 692.4773044204824 635.5664937629549 729.8588683152906 1.0676827505230722 0.9914886701616249 1.04530695771092 1.1926677460214763 1.131200903567614 0.5173356504325196 1.0913452057719522 1.0404320303807866 0.9487824762873748 0.8708073866801295 1.0 9.511473709019095 NQIHVKS(ph)PPREGSQGELTPANSQSR ddPTM_A549_MK2206_60min_R1 6 NQIHVKSPPREGSQGELTPANSQSR 25 2 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 NQIHVKS(0.965)PPREGS(0.035)QGELTPANSQSR;NQIHVKS(0.862)PPREGS(0.116)QGELT(0.02)PANS(0.001)QS(0.001)R;NQIHVKS(0.919)PPREGS(0.08)QGELT(0.001)PANSQSR;NQIHVKS(0.979)PPREGS(0.018)QGELT(0.002)PANSQSR;NQIHVKS(0.964)PPREGS(0.036)QGELTPANSQSR;NQIHVKS(0.956)PPREGS(0.043)QGELTPANSQSR 109.14 7.5169e-13 66343900.0 6299.34 8988.89 8489.81 7215.75 10385.71 7143.219999999999 6783.950000000001 6405.4299999999985 12286.329999999998 12748.83 12258.229999999998 True False 7362.514587923542 9446.386106346547 9693.79271831622 8983.60907392733 8857.985816866843 7899.110799114315 8016.505902128864 7313.419318306663 9503.49587223737 9868.860448553021 9214.173181062988 0.7990423495680564 1.0252017105301214 1.0520523684359382 0.9749772331597245 0.9613435348786169 0.8572783085245896 0.8700190179412326 0.7937141156991966 1.031399745315076 1.0710521991094708 1.0 13.169638998418492 NQIHVKS(ph)PPREGSQGELTPANSQSR ddPTM_A549_PD325901_60min_R1 2 NQIHVKSPPREGSQGELTPANSQSR 25 2 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 NQIHVKS(0.961)PPREGS(0.036)QGELT(0.001)PANS(0.001)QS(0.001)R;NQIHVKS(0.8)PPREGS(0.198)QGELT(0.002)PANSQSR 44.916000000000004 0.006653399999999999 96001000.0 3750.3 5446.0 4796.8 7008.9 6301.8 4937.6 4493.7 5789.200000000001 9198.7 5767.9 5859.2 True False 4131.027695175058 5904.953532738664 5122.339693501657 7441.823834633172 5859.183308029777 4897.389822656062 4664.71021254699 5673.729864460462 8812.110628340935 5403.713809644026 5138.555544529001 0.803927807995254 1.1491465805065868 0.9968442783410975 1.4482326346664582 1.1402393644003763 0.9530674097451944 0.9077862780939456 1.10414878564488 1.7149003357029298 1.051601712352285 1.0 12.32714715738625 -8.555443108615924 24.999889897917697 1.3413778059460846 1.0677568614798847 0.0894470875105241 0.23549686476174758 263.4163894602874 202225.44696074846 0.04938227269689651 0.05599440981528609 2.783279952000463e-09 8.555443108615924 -0.2736209444661999 NQIHVKSPPREGS(ph)QGELTPANSQSR ddPTM_A549_PD325901_60min_R1 2 NQIHVKSPPREGSQGELTPANSQSR 25 2 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 NQIHVKS(0.413)PPREGS(0.587)QGELTPANSQSR;NQIHVKS(0.385)PPREGS(0.613)QGELT(0.002)PANSQSR 111.79 3.8864e-13 63344000.0 4723.2 3564.0 4756.5 4455.1 5303.6 5196.4 4634.5 4734.9 5360.3 5288.6 5222.1 True False 5202.6957869639355 3864.350787859089 5079.304693158071 4730.281408733793 4931.093432426727 5154.082241260928 4810.868433595708 4640.4587050428045 5135.025231945373 4954.676893441881 4579.814805619348 1.1360057137201978 0.8437788320867478 1.1090633374357972 1.0328542985908131 1.076701491592273 1.1253909732194771 1.0504504303739228 1.0132415615035455 1.1212298858994894 1.0818509271079224 1.0 12.161073545775471 NQIPRT(ph)PENLITEIR ddPTM_A549_MK2206_60min_R1 2 NQIPRTPENLITEIR 15 1 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 NQIPRT(1)PENLITEIR;NQIPRT(1)PENLITEIR 100.02 3.2392000000000003e-06 43108000.0 1316.53 1542.83 1521.1100000000001 1658.04 2242.16 1736.3 2127.92 1368.58 2468.1 2413.6000000000004 2209.02 True False 1538.728077931812 1621.3534570402633 1736.8262707596512 2064.2598744322436 1912.341234171392 1920.0341135373392 2514.5355197573754 1562.5804061004694 1909.079290745816 1868.3660836820006 1660.4593681495423 0.9266881848765799 0.9764487395118499 1.0459914310912732 1.2431860207050454 1.1516940858977798 1.1563270685009737 1.5143613676976853 0.9410530821009179 1.1497296033647255 1.1252103601692793 1.0 10.697366704831003 -5.845942714850191 3.1833431086046526 1.116290637988481 0.9452046274284512 0.20659629916737243 0.14289151968722824 0.34498570337525425 6.857388015473556 0.020747769685984584 0.08073057339098967 1.425795649251642e-06 5.845942714850191 -0.1710860105600297 NQIPRT(ph)PENLITEIR ddPTM_A549_PD325901_60min_R1 2 NQIPRTPENLITEIR 15 1 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 NQIPRT(1)PENLITEIR;NQIPRT(1)PENLITEIR 117.3 3.4051e-07 84788000.0 1403.58 1190.06 1032.71 1678.41 1591.98 1527.88 1439.0500000000002 1376.24 1195.42 1504.4499999999998 1214.98 True False 1546.0704083390162 1290.3505327159326 1102.795910789713 1782.0815737543214 1480.1648168328488 1515.4374518469997 1493.8138352283759 1348.789813560606 1145.1806545850302 1409.4587702489562 1065.545162392791 1.450966568950636 1.2109768579102906 1.034959333223635 1.6724599169053278 1.3891150455875438 1.422217945641956 1.4019244682917649 1.265821347761328 1.0747368530240515 1.3227583588140663 1.0 10.057376026707441 -8.704071217153508 2.3251608171363953 1.0299417839299234 1.3646508617778497 0.21146771267347675 0.17250445714859586 0.1773433040560849 1.894610957444045 0.027163511273446385 0.029968661569046963 1.976645476179608e-09 8.704071217153508 0.33470907784792625 NQKDPGVLDR ddPTM_A549_MK2206_60min_R1 1 NQKDPGVLDR 10 1 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 45.973 0.040737 2622700.0 1503.0 1376.9 1591.7 1498.0 1914.0 1455.3 1504.3 1545.4 2295.9 2188.0 3070.0 False True 1756.6696551780149 1446.9783287845962 1817.4269942135252 1865.0100672477743 1632.453135460468 1609.2988800500436 1777.6118380254034 1764.46518258901 1775.8823157989211 1693.729280368005 2307.6342723103903 0.7612426614808625 0.6270397116852878 0.7875715038648337 0.8081913540747238 0.7074141492213432 0.6973803862077429 0.770317835609916 0.7646208083148451 0.7695683571300568 0.7339678131371541 1.0 11.172198879818287 -10.65118282953262 0.44685584438539155 1.0636571919665792 0.7283598575967505 0.0 0.09185220035765819 0.5638093891000334 0.15133716976829367 0.0851056294576741 0.012847642748821386 2.2326321302477016e-11 10.65118282953262 -0.33529733436982867 NQKDPGVLDR ddPTM_A549_PD325901_60min_R1 1 NQKDPGVLDR 10 1 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 50.791000000000004 0.02675 8337100.0 2480.2 1983.9 2579.1 2907.4 2867.6 3370.6 2662.9 2910.9 2759.6 3029.6 3587.5 False True 2731.9880781732604 2151.0902154976543 2754.1332353882003 3086.9834948155194 2666.1896686829473 3343.1509511188683 2764.2381166947916 2852.8398159431263 2643.6236087675024 2838.310538965231 3146.2602430362144 0.868328703647486 0.6836974850566723 0.8753672686434857 0.9811596169287345 0.847415491005287 1.0625792823459035 0.8785789804937552 0.9067399374407977 0.840243147278988 0.9021219860141624 1.0 11.619422292926687 -13.665629992598667 0.016170538142157253 1.991920557964902 2.2735033058577843e-06 0.13540718005149843 0.08776411732096992 3684.362810340936 5.8514169832960015 434.1432451850913 298.2158058871954 2.1595835335978712e-14 13.665629992598667 -1.9919182844615961 NQKNS(ph)LSDPNIDR ddPTM_A549_PD325901_60min_R1 1 NQKNSLSDPNIDR 13 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NQKNS(0.854)LS(0.146)DPNIDR 50.391999999999996 0.007910200000000001 10072000.0 3962.3 4569.4 4553.4 4543.0 5084.4 4178.8 4547.6 5769.2 7821.0 12077.0 12704.0 True False 4364.549779108906 4954.479374310692 4862.421105818553 4823.610792098406 4727.28928422778 4144.769238276726 4720.6614065422045 5654.128780150155 7492.310568260125 11314.456158926292 11141.488537291163 0.39173847951290547 0.4446873824559243 0.43642472812710503 0.4329413234105587 0.42429602367810076 0.37201216196596715 0.42370114107660717 0.5074841446208449 0.6724694409712811 1.015524642067009 1.0 13.443654373619232 -9.448224582513907 0.5840408986011059 0.9802875479405894 0.4027719395164766 0.9650130105836434 0.04226887218252433 0.09851803017816745 0.0751232495587363 0.02279867716970015 0.013319053100186757 3.5626685294354354e-10 9.448224582513907 -0.5775156084241128 down NQKPEVR ddPTM_A549_PD325901_60min_R1 1 NQKPEVR 7 1 C9JXB8;C9JNW5;P83731 C9JXB8 RPL24 60S ribosomal protein L24 0 80.229 0.016134 7273200.0 2990.5 3213.0 3213.9 3110.4 3689.6 3367.1 3215.2 3697.1 3621.7 2947.9 3955.8 False True 3294.093358510256 3483.7707860244827 3432.014580750701 3302.5223437690697 3430.455224429001 3339.6794539584475 3337.5561954249506 3623.358440181158 3469.492543801008 2761.7690909082385 3469.261677882273 0.9495084730884457 1.0041821890331046 0.9892636818464762 0.9519380924257679 0.9888142039844742 0.9626484722239442 0.9620364519352951 1.0444177397402175 1.0000665461242682 0.796068255247351 1.0 11.760412948331915 -8.17561195619043 24.999999989702566 1.0033647907867511 0.9739238813976699 0.0 0.06564363590015168 67.98774805316083 19802.483096857417 0.003069101572988613 0.003962193052287249 6.674028299083092e-09 8.17561195619043 -0.02944090938908117 NQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_A549_MK2206_60min_R1 4 NQKPSQVNGAPGSPTEPAGQK 21 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 NQKPSQVNGAPGS(0.999)PT(0.001)EPAGQK;NQKPSQVNGAPGS(0.998)PT(0.002)EPAGQK;NQKPSQVNGAPGS(0.949)PT(0.05)EPAGQK;NQKPS(0.003)QVNGAPGS(0.979)PT(0.017)EPAGQK 130.29 5.1662e-18 1450881400.0 5198.429999999999 6359.41 7559.139999999999 6609.34 9535.16 7125.91 7246.14 6145.320000000001 9450.529999999999 9491.85 8189.58 True False 6075.797894588854 6683.076805763704 8631.139717936312 8228.628596704544 8132.550595150076 7879.969066403764 8562.669842444599 7016.437929253195 7310.000044395311 7347.634492623877 6155.881265090461 0.9869907545235231 1.08564095341847 1.4020965230247138 1.336710089482797 1.321102575722043 1.2800716464579125 1.3909738465884411 1.1397942271958503 1.1874823001947374 1.1935958762381853 1.0 12.587749689830945 -9.901259587973005 0.6634158148087672 1.009490988146884 1.255039670168764 0.10101588679873241 0.1334609685409786 0.5874972276719367 0.5293003085260637 0.06761791678379296 0.02913607190816301 1.2552794295265512e-10 9.901259587973005 0.24554868202187996 NQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_A549_PD325901_60min_R1 5 NQKPSQVNGAPGSPTEPAGQK 21 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 NQKPSQVNGAPGS(0.874)PT(0.126)EPAGQK;NQKPSQVNGAPGS(0.995)PT(0.005)EPAGQK;NQKPSQVNGAPGS(0.996)PT(0.004)EPAGQK;NQKPSQVNGAPGS(0.991)PT(0.009)EPAGQK;NQKPS(0.001)QVNGAPGS(0.996)PT(0.003)EPAGQK 175.0 7.7124e-36 2248844200.0 10031.73 10905.5 12375.79 14193.2 15011.08 13146.21 14050.539999999999 14486.449999999999 14806.0 13391.35 13511.64 True False 11050.143844630697 11824.544757855583 13215.685531070887 15069.881728904053 13956.753526214687 13039.151624372038 14585.240988450509 14197.506390349829 14183.755309251945 12545.817875617917 11849.79393734295 0.9325178060529584 0.9978692305013172 1.1152671178039242 1.2717420917686553 1.177805588857706 1.1003694826524362 1.2308434277905191 1.1981226395514266 1.1969621905874535 1.0587372187191835 1.0 13.532574351064692 -5.672684051944213 3.332262991655561 1.1304367750101798 0.9457148143924781 0.45704643212772333 0.07669280068965184 0.22094882760804802 4.669810295451477 0.01361581046742431 0.0644868626967374 2.1247896785806343e-06 5.672684051944213 -0.18472196061770174 NQKPSQVNGAPGSPTEPAGQK ddPTM_A549_MK2206_60min_R1 2 NQKPSQVNGAPGSPTEPAGQK 21 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 0 ; 121.21 7.5869e-15 12675500.0 966.16 1450.22 1309.51 1532.0700000000002 2071.67 1805.1100000000001 1478.6399999999999 1561.03 1890.87 1862.48 1802.23 False True 1129.2241876558828 1524.0300036095562 1495.2182089542966 1907.4272187772356 1766.9300873246543 1996.1255420649582 1747.289748173825 1782.3107829538774 1462.5909640989196 1441.744474451462 1354.686551982395 0.8335686111325314 1.12500563424015 1.1037373972349938 1.4080210776330373 1.304309166381698 1.4734962409894057 1.289811097347139 1.3156628596819788 1.0796526782956704 1.0642642553302606 1.0 10.40374336339045 -8.904290810405449 4.714217759771149 1.0340369741804796 1.241846582978666 0.20002417046705123 0.16375806061644727 0.23152300574720397 8.583764425860961 0.03024718132473739 0.03183539302528111 1.2465485262440417e-09 8.904290810405449 0.20780960879818644 NQKPSQVNGAPGSPTEPAGQK ddPTM_A549_PD325901_60min_R1 2 NQKPSQVNGAPGSPTEPAGQK 21 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 0 ; 148.2 7.9375e-22 13423800.0 1507.04 1472.1 1569.6399999999999 1561.33 1629.91 1749.9 1751.63 1974.9699999999998 2014.3899999999999 1658.83 1794.9900000000002 False True 1660.0335913757895 1596.1590333353997 1676.1652094120943 1657.769808062294 1515.4307444842461 1735.6493945774953 1818.289238178715 1935.5776740160065 1929.7321935299206 1554.0911907023012 1574.217609379115 1.0545134176402213 1.013937986607162 1.0647608052568973 1.0530753805480126 0.9626564557881837 1.1025473125421652 1.155043132121908 1.2295489915015085 1.2258357307354881 0.9872149704355347 1.0 10.620419267866023 -7.496247319628216 19.329131058193493 1.1240426028290376 1.0321902418247897 0.24526842695793327 0.07611372301518432 59.150890168297664 42930.76055133228 0.013995902057439944 0.02228278871217704 3.189720873122721e-08 7.496247319628216 -0.09185236100424787 NQKQPGVDSLS(ph)PVASLPK ddPTM_A549_PD325901_60min_R1 2 NQKQPGVDSLSPVASLPK 18 1 Q9UBW7;A0A087X151;Q9UBW7-2 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 NQKQPGVDS(0.001)LS(0.999)PVASLPK;NQKQPGVDS(0.019)LS(0.981)PVASLPK 141.1 3.6291e-17 9531800.0 4519.8 4479.6 5408.299999999999 5588.1 6390.7 7463.9 5665.3 7220.700000000001 6598.0 6536.1 6208.3 True False 4978.646768699098 4857.111613157565 5775.339760749878 5933.264245504094 5941.839278718133 7403.116473048155 5880.896091671116 7076.6774739704315 6320.709005163064 6123.409530542192 5444.7184576562295 0.914399304099599 0.8920776438545898 1.0607233056520557 1.089728383872794 1.0913033107089063 1.3596876552245 1.080110227444643 1.299732489201417 1.1608881256798573 1.1246512704309999 1.0 12.41064173484493 -5.874594154109227 2.7146400124215004 1.115639045913167 0.8972053700368355 0.4415191021584325 0.10111502292349384 0.23619041082198144 3.429643389499297 0.01611867244264768 0.06599476208165131 1.3347681833219898e-06 5.874594154109227 -0.21843367587633156 NQLVT(ph)PEPTSR ddPTM_A549_PD325901_60min_R1 1 NQLVTPEPTSR 11 0 Q14676;Q14676-2;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 NQLVT(0.996)PEPT(0.002)S(0.002)R 81.918 0.0007871 8922600.0 4711.0 4497.9 5098.8 5461.3 5030.3 5812.6 5018.0 5174.7 5567.8 5117.8 5921.8 True False 5189.257251945096 4876.953818381425 5444.835229575182 5798.632097487788 4676.989081592912 5765.26411276139 5208.962735954961 5071.48654902638 5333.804728546057 4794.66123459079 5193.456141383093 0.9991915038225625 0.939057476488599 1.048403044398319 1.1165266326757748 0.9005542656508044 1.1101016270883566 1.0029857948444594 0.9765147545225575 1.027024120998081 0.923212039163173 1.0 12.342479227594286 -5.76094060178427 24.99999955507608 1.0176395930686155 0.9691244947057206 0.054442248115964986 0.06467616457017072 20.889103988014682 1046688.4730840527 0.007175185268842825 0.02476852753911191 1.7340411453834447e-06 5.76094060178427 -0.048515098362894915 NQQFHK ddPTM_A549_MK2206_60min_R1 2 NQQFHK 6 0 Q15233;Q15233-2;H7C367 Q15233 NONO Non-POU domain-containing octamer-binding protein 0 ; 83.229 0.044302999999999995 6803700.0 1854.01 1774.37 1877.73 1353.92 2498.6000000000004 2120.73 2370.8999999999996 1715.6399999999999 2834.8 2827.5 2820.3 False True 2166.9215618074463 1864.6778540529626 2144.020349214401 1685.6304607797776 2131.0592498754063 2345.1442409733577 2801.6618405733116 1958.837223927144 2192.7223262453867 2188.765786215966 2119.9416736798034 1.0221609342893359 0.8795892251206361 1.011358178309124 0.795130583877741 1.0052442839978257 1.1062305487408277 1.3215749637631187 0.9240052442230574 1.0343314410340594 1.0324650972197256 1.0 11.049808856879586 -6.985973117372858 24.97905117099428 1.0406090709825173 0.9260024240582897 0.24586608642177454 0.11054122255284068 306.4905947269346 545794.7081868141 0.015854694162287387 0.029953229665522697 1.0328253351923289e-07 6.985973117372858 -0.11460664692422762 NQQGFS(ph)PK ddPTM_A549_MK2206_60min_R1 1 NQQGFSPK 8 0 D6RCT7;C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87 D6RCT7 KIF15 Kinesin-like protein;Kinesin-like protein KIF15 1 NQQGFS(1)PK 76.22800000000001 0.0046922 6127200.0 4354.8 5161.2 4711.8 4350.4 6751.2 4631.8 5074.7 5171.8 7513.6 6754.4 6304.9 True False 5089.783775362088 5423.883034732412 5380.004090805613 5416.248195296879 5758.107423260563 5121.934001659993 5996.707302019224 5904.918487973234 5811.781596753685 5228.5763488654675 4739.219323612305 1.0739709280815848 1.144467614678412 1.1352089286099745 1.14285662372944 1.2149907041802923 1.0807547935460342 1.265336523283848 1.2459686046925584 1.2263162347852383 1.1032568851192495 1.0 12.210433712833712 -10.851053419349661 1.122369426284968 1.000936783544258 1.174603809945867 0.27816282212490595 0.06684694717715002 0.31986083493658984 0.7214398342324899 0.042639496836661135 0.01064267527463068 1.4091154628986232e-11 10.851053419349661 0.17366702640160914 NQRPS(ph)SMVSETSTAGTASTLEAKPGPK ddPTM_A549_MK2206_60min_R1 1 NQRPSSMVSETSTAGTASTLEAKPGPK 27 2 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;E9PIK1 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 NQRPS(0.304)S(0.304)MVS(0.304)ET(0.059)S(0.014)T(0.014)AGT(0.001)ASTLEAKPGPK 42.45399999999999 0.013294 4020600.0 784.74 1104.0 939.9 850.22 1536.0 1041.1 1125.1 1027.5 1747.1 1529.0 1672.3 True False 917.184926949032 1160.1888844347395 1073.1919531703793 1058.523938167826 1310.0564347268962 1151.2685109737506 1329.5161064697093 1173.151271586778 1351.3846395454054 1183.5978380633815 1257.0217568679684 0.7296492060999138 0.9229664308480225 0.8537576595685784 0.842088796303156 1.0421907397936139 0.9158699956333964 1.0576715153939498 0.9332784139789556 1.0750686152899647 0.9415889833223475 1.0 10.295793905187319 -6.0078007177885215 0.4855064159254348 1.0332696538743424 0.7150198670569626 0.5119299138946252 0.06930858728861856 1.135222921761385 0.2747318530066063 0.013218955743881097 0.1799309073279122 9.821985354254733e-07 6.0078007177885215 -0.3182497868173798 NQRPSSMVS(ph)ETSTAGTASTLEAKPGPK ddPTM_A549_PD325901_60min_R1 1 NQRPSSMVSETSTAGTASTLEAKPGPK 27 2 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;E9PIK1 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 NQRPS(0.148)S(0.148)MVS(0.173)ET(0.173)S(0.173)T(0.173)AGT(0.01)AS(0.003)T(0.001)LEAKPGPK 41.763000000000005 0.015137000000000001 3023100.0 1144.6 1213.1 1149.2 1277.0 1591.2 1329.8 1207.6 1657.2 1366.1 1338.0 1862.3 True False 1260.7989493900143 1315.3321943748208 1227.191622700988 1355.877389722576 1479.439601341996 1318.9705496937845 1253.5558788240762 1624.1458459517496 1308.687567740718 1253.5184516554914 1633.24890609236 0.771957626719951 0.8053470536354604 0.7513806487935224 0.830171925825188 0.9058261700487763 0.8075747332655473 0.767522864486883 0.9944264097733946 0.8012787045863247 0.7674999487093519 1.0 10.673528958121851 -14.999999999994406 0.21434888299632188 1.892256997657883 0.7960893730800203 0.0 0.09382594452439431 27.04333743583565 0.32885511915504595 10.184792081930125 0.045816932626247135 1.00000000001288e-15 14.999999999994406 -1.0961676245778627 NQS(ph)LLASSEWPELR ddPTM_A549_PD325901_60min_R1 1 NQSLLASSEWPELR 14 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NQS(0.999)LLASSEWPELR 67.115 0.0039 1012100.0 791.51 831.99 735.24 1117.5 873.1 936.0 604.46 848.09 890.73 1084.1 1044.0 True False 871.8635125211346 902.1047171691587 785.1378077572876 1186.5254369733586 811.7764680314834 928.3775263298111 627.4630560732036 831.174179636266 853.2957156970132 1015.649740986337 915.5946184612706 0.9522374803669886 0.9852665131269746 0.8575168441649145 1.2959069582206684 0.8866112269158356 1.0139613182633416 0.6853066230639331 0.9077971439293955 0.9319579849989118 1.1092788451435167 1.0 9.83856517304616 NQS(ph)LVEENEK ddPTM_A549_MK2206_60min_R1 2 NQSLVEENEK 10 0 O95239;O95239-2;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 NQS(1)LVEENEK;NQS(1)LVEENEK 179.67 2.2105e-11 70072000.0 6023.4 8609.2 7621.200000000001 7849.0 10494.8 9418.2 7767.200000000001 9204.8 11069.4 11133.4 10473.5 True False 7040.00266200882 9047.371507133666 8702.000759125534 9772.005352355 8951.028822377497 10414.827672704821 9178.399699734711 10509.60858851774 8562.198574199478 8618.357207517884 7872.640896105165 0.8942364773035341 1.1492168417855406 1.1053470968592864 1.241261411680737 1.1369791840506587 1.3229141034309533 1.1658603283017195 1.334953381871789 1.0875891187206899 1.0947225106865535 1.0 12.942631957066371 -9.106696105969663 3.245466441593049 1.033705215416295 1.1737077363609432 0.14015523229100457 0.11475732615764134 0.23943122467251765 5.257324922195972 0.021074370350406785 0.020592158398395784 7.821749336875915e-10 9.106696105969663 0.14000252094464827 NQS(ph)LVEENEK ddPTM_A549_PD325901_60min_R1 2 NQSLVEENEK 10 0 O95239;O95239-2;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 NQS(1)LVEENEK;NQS(1)LVEENEK 198.03 2.5940999999999997e-19 98257000.0 26961.0 28258.0 27400.0 27504.0 36031.0 27473.0 28907.0 29925.0 28730.0 30401.0 30857.0 True False 29698.060872360827 30639.40083145963 29259.52876958499 29202.859613883917 33500.306860202014 27249.26899664413 30007.071703517337 29328.12239929164 27522.578011266258 28481.47567173289 27061.78461863929 1.0974169401934326 1.1322017842960805 1.0812120923256467 1.079118026597918 1.237919351302799 1.0069280123482953 1.1088356561248156 1.083746796916393 1.0170274576906355 1.0524611023663148 1.0 14.723969362085057 -8.5975311557471 1.0013400386887603 1.0035223981766672 1.1124865851095953 0.29372443474559684 0.05390274628833879 0.3047800670119597 0.6016269900982635 0.010430640018823722 0.0118162548527431 2.5262064767140438e-09 8.5975311557471 0.10896418693292809 NQS(ph)PEPSSGPR ddPTM_A549_MK2206_60min_R1 2 NQSPEPSSGPR 11 0 C9JHG2;G3XAJ6;Q14699 C9JHG2 RFTN1 Raftlin 1 NQS(0.979)PEPS(0.021)S(0.001)GPR;NQS(0.94)PEPS(0.03)S(0.03)GPR 105.03 0.00018287 10681700.0 935.9399999999999 1204.3400000000001 1283.65 992.04 1374.01 1013.97 994.6400000000001 879.81 1574.93 1675.35 1201.6100000000001 True False 1093.9037904639463 1265.6357618479485 1465.6908721003906 1235.0898445343682 1171.894949140041 1121.2676323811882 1175.3532131713016 1004.5257618051223 1218.2108696464109 1296.8872714188922 903.217074251104 1.2111194768665647 1.4012531405004067 1.6227448681875924 1.36743411937649 1.2974676659115523 1.2414154518844533 1.3012964952482073 1.1121642741729807 1.3487465022253722 1.435853360604589 1.0 9.81892894858777 -14.153102630582682 0.18568740124365746 3.249486628839028e-12 1.4100671312326707 0.0 0.17257923697152425 22.047207210476884 0.32932256024417056 8.287087261238517 0.13391222094565042 7.0290619252174695e-15 14.153102630582682 1.4100671312294213 NQS(ph)PEPSSGPR ddPTM_A549_PD325901_60min_R1 2 NQSPEPSSGPR 11 0 C9JHG2;G3XAJ6;Q14699 C9JHG2 RFTN1 Raftlin 1 NQS(0.992)PEPS(0.007)S(0.001)GPR;NQS(0.544)PEPS(0.228)S(0.228)GPR 128.08 1.1543e-07 13476400.0 1411.29 1404.87 1232.8600000000001 1402.75 1777.0 1576.67 1246.62 1363.96 1516.96 1527.48 1586.58 True False 1554.5631218632134 1523.2633252916933 1316.5292933894377 1489.3946816236055 1652.1896503171981 1563.8301222632726 1294.0608062766391 1336.7547477940798 1453.2074465705005 1431.0346521186327 1391.440718159274 1.1172327369575132 1.0947382129989744 0.9461626903739485 1.070397511145077 1.1873949272541535 1.1238927407069497 0.930015047991798 0.9606983110013211 1.0443904850599293 1.0284553509485745 1.0 10.442363729127871 -7.739602091121095 24.995959791213107 1.009815144088668 1.0871886249754315 0.3612927764399797 0.06247776954716901 268.74982548311857 307622.5668398201 0.01021219903274002 0.015140045519906404 1.821368867221236e-08 7.739602091121095 0.07737348088676343 NQS(ph)PTEAEKPASSSLPSSPPPQLLTR ddPTM_A549_PD325901_60min_R1 1 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQS(0.877)PT(0.123)EAEKPASSSLPSSPPPQLLTR 199.7 1.0425999999999998e-68 73395000.0 3167.2 3442.1 3489.3 3354.4 3908.8 3935.8 3627.2 4440.0 3722.2 4123.8 3713.8 True False 3488.7318124305907 3732.1778470510003 3726.1048808654346 3561.593669604864 3634.2593726279506 3903.7481497103304 3765.2350808799974 4351.440716887383 3565.7688782991727 3863.4225642278902 3257.0261437178797 1.0711402544801867 1.1458851364302336 1.1440205624545905 1.0935109245206494 1.115821369637353 1.1985621169298386 1.156034650855458 1.3360165147216885 1.0947928327737844 1.186181011067296 1.0 11.669339584764574 -9.516210841758907 1.5481767588829543 1.0247275230669852 1.1541934532467335 0.0 0.0836744562589787 0.25503186024330105 1.2443379825068022 0.016598090558221066 0.013233211415897199 3.0464156533669894e-10 9.516210841758907 0.12946593017974828 NQS(ph)PVLEPVGR ddPTM_A549_MK2206_60min_R1 2 NQSPVLEPVGR 11 0 B4DG22;B1AXG1;B7ZB17;P51812;A0A2R8Y603 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 NQS(1)PVLEPVGR;NQS(1)PVLEPVGR 158.02 2.9487e-13 122569000.0 6101.4 6197.700000000001 5909.3 6730.3 9044.4 5950.6 6317.8 6064.0 9305.2 7898.2 8497.7 True False 7131.16715509191 6513.136457482966 6747.327597478162 8379.223802134644 7713.98074104423 6580.288542311405 7465.662481072196 6923.590570221144 7197.587057350984 6113.99113446187 6387.486565411073 1.1164277344562958 1.0196712573537612 1.0563353094182095 1.3118186185328424 1.207670757824567 1.0301843260139874 1.1687950189202059 1.0839303534058502 1.1268261754673101 0.9571826213412002 1.0 12.641032636342842 -10.70985449726755 0.5884994440997132 0.9810538041021798 1.1279944008552638 0.3192617806356536 0.08100440901098767 1.3917106350749011 0.6858682189758454 0.1100537196846282 0.01799056283660747 1.9504979703623054e-11 10.70985449726755 0.14694059675308402 NQS(ph)PVLEPVGR ddPTM_A549_PD325901_60min_R1 2 NQSPVLEPVGR 11 0 B4DG22;B1AXG1;B7ZB17;P51812;A0A2R8Y603 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 NQS(1)PVLEPVGR;NQS(1)PVLEPVGR 193.15 1.5061e-19 155259000.0 9977.3 10422.8 10490.7 12004.0 13930.7 11922.599999999999 12355.5 12597.0 14246.2 13546.6 14835.699999999999 True False 10990.18815109995 11301.165934819785 11202.661987703847 12745.459816937988 12952.255690306014 11825.506298525437 12825.695313689028 12345.742952844672 13647.481756494994 12691.265364122786 13011.002951250826 0.8446841640323659 0.8685853025445156 0.8610144836395466 0.9795908789424024 0.995484801504932 0.9088850677255883 0.9857576208186177 0.9488694299049253 1.0489185044096065 0.9754256002918437 1.0 13.667444555826934 -5.675528403262183 0.3863227743762304 1.0215844244810526 0.7370937035608602 0.618631407236933 0.03922854700346513 1.7310231592924812 0.21438430379031334 0.010881492106007102 0.21463818909429647 2.1109191352233724e-06 5.675528403262183 -0.28449072092019234 NQS(ph)SEDILR ddPTM_A549_MK2206_60min_R1 2 NQSSEDILR 9 0 Q13625;Q13625-3;Q13625-2;H0Y847 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 NQS(0.965)S(0.035)EDILR;NQS(0.98)S(0.02)EDILR 133.89 4.6646e-05 11888800.0 1101.93 908.0 1111.61 1012.0899999999999 1786.89 1450.58 1275.95 1332.04 2201.2 1730.4700000000003 1735.0 True False 1287.9088443980781 954.2133216184271 1269.2530131542985 1260.052095434447 1524.0408480788697 1604.0794127829263 1507.7735988356803 1520.860749201413 1702.631714594096 1339.5556251363898 1304.1516164360028 0.9875453345813326 0.7316736103322939 0.9732403787704719 0.9661852805718469 1.1686071073881594 1.229979239044743 1.1561336732887988 1.166168664773529 1.3055473712842247 1.027147157013185 1.0 10.34889588702637 -6.539989182731563 2.0887381083922083 1.1583536649135497 0.8755602548811131 0.5577674988818383 0.10131109746899417 0.2063556266638481 1.7884401321481753 0.018000271341672244 0.04693232756744256 2.88410333855805e-07 6.539989182731563 -0.28279341003243663 NQS(ph)SEDILR ddPTM_A549_PD325901_60min_R1 2 NQSSEDILR 9 0 Q13625;Q13625-3;Q13625-2;H0Y847 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 NQS(0.97)S(0.03)EDILR;NQS(0.973)S(0.027)EDILR 113.22 0.00024644 16207900.0 1185.01 1278.22 1114.15 1086.36 1300.81 1600.15 1356.55 1158.1799999999998 1133.92 1148.92 1413.96 True False 1305.3113428417457 1385.9400853134805 1189.7629189282163 1153.4619898974306 1209.4455931508805 1587.118908928042 1408.1742525826435 1135.0791913253663 1086.2652857130192 1076.3769951240865 1240.0518838309372 1.0526263939934515 1.1176468528331618 0.9594460799919424 0.9301723620902044 0.9753185402327654 1.2798810514483459 1.1355768826642316 0.9153481448040102 0.8759837389683894 0.8680096447245386 1.0 10.276184768967509 -8.276960749544045 24.400282622623482 0.9378437897639743 1.0620949774656765 0.34378393661953166 0.09749101729471714 656.5138662403612 1032066.603331764 0.017480636059324997 0.021175037476437147 5.284930135019907e-09 8.276960749544045 0.12425118770170218 NQSHS(ph)SPSVS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 NQSHSSPSVSPSR 13 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 2 NQS(0.008)HS(0.539)S(0.455)PS(0.155)VS(0.831)PS(0.012)R 73.156 0.00016659999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NQSHSS(ph)PSVS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 NQSHSSPSVSPSR 13 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 2 NQS(0.015)HS(0.338)S(0.645)PS(0.267)VS(0.608)PS(0.127)R 44.391000000000005 0.021234 1965500.0 280.62 271.91 215.96 301.2 375.72 224.27 310.08 339.34 202.56 325.49 386.14 True False 309.10833581847453 294.824809968228 230.61634427297736 319.8044399251685 349.33072336363404 222.44361947648156 321.88026408228677 332.57159749291964 194.0471076213746 304.9385058515292 338.647227943137 0.9127738552473182 0.8705956690061337 0.6809928599554361 0.9443586527123958 1.0315475649553845 0.6568594133415808 0.9504884065855528 0.9820591165410705 0.5730066322998442 0.9004606584369623 1.0 8.403639376144795 NQSLGQS(ph)APSLTAGLK ddPTM_A549_MK2206_60min_R1 2 NQSLGQSAPSLTAGLK 16 0 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 NQSLGQS(1)APSLTAGLK;NQSLGQS(1)APSLTAGLK 239.7 2.6235999999999994e-65 18884600.0 6112.3 7841.900000000001 8620.2 7406.0 11751.5 9115.3 8618.5 8488.1 12747.3 12197.4 10518.7 True False 7143.906808612494 8241.019214536944 9842.673980975953 9220.470332467974 10022.86991711792 10079.87499575356 10184.369890329028 9691.314168716044 9860.056903255192 9441.99886853779 7906.616488648628 0.903535263012802 1.0422940364400388 1.2448654864070978 1.1661714395412526 1.2676560108242958 1.2748658051424444 1.2880819380768658 1.2257220497073142 1.2470640149817662 1.1941895603629544 1.0 12.948844732918682 -5.494733410520135 3.651556341901956 1.1677726575995768 0.9167376710549568 0.5092513910532248 0.08603532443900277 0.2150455823816723 5.74159949336966 0.0166178450170396 0.10457924602377326 3.200859338143554e-06 5.494733410520135 -0.25103498654462 NQSLGQS(ph)APSLTAGLK ddPTM_A549_PD325901_60min_R1 2 NQSLGQSAPSLTAGLK 16 0 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 NQSLGQS(1)APSLTAGLK;NQSLGQS(0.995)APS(0.005)LTAGLK 308.29 2.0482999999999996e-143 37899000.0 9355.7 9950.7 11232.3 10939.8 12458.400000000001 11478.5 11782.599999999999 13560.9 12898.4 11792.0 10536.0 True False 10305.483776697673 10789.28041098469 11994.591423306916 11615.526599911544 11583.364963146749 11385.022901684546 12230.99329068612 13290.417211179756 12356.325103394249 11047.451107564695 9240.138793206843 1.1152953442944005 1.1676535009319062 1.298096456313523 1.257072740990756 1.2535920966536342 1.232126828014161 1.3236806896967923 1.4383352359328838 1.337244534949882 1.1955936328236272 1.0 13.173698806732789 -10.785087821156015 1.0691060576420723 1.0022832658306196 1.274370724860679 0.23893473251997 0.0984277651974436 0.297454259377685 0.6115618151888987 0.05926835616550322 0.015436630733075295 1.6402580537558242e-11 10.785087821156015 0.2720874590300595 NQSLLASSEWPELRLS(ph)K ddPTM_A549_MK2206_60min_R1 2 NQSLLASSEWPELRLSK 17 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NQSLLASSEWPELRLS(1)K;NQSLLASSEWPELRLS(1)K 125.09 7.6374e-11 5580600.0 5680.7 5568.4 5730.9 4827.1 8778.8 6617.799999999999 5965.1 6607.6 9439.8 8051.599999999999 8866.3 True False 6639.4632802194 5851.807775440586 6543.627794897466 6009.739716696754 7487.450149206042 7318.091203459891 7048.881456494944 7544.2475349263195 7301.700372263016 6232.737967920942 6664.553012568602 0.9962353465713476 0.8780495502706229 0.9818554646586073 0.9017468546447236 1.123473717604999 1.098061818948516 1.0576675499769514 1.1319960274453083 1.0956024145194472 0.9352072008680394 1.0 12.702292402560651 -6.754421434313854 24.999989132923844 1.062349350895262 0.9381118940367192 0.4853851548548198 0.061247815663130784 99.33566722766012 353859.73040844034 0.007915921969573905 0.016206464378067612 1.7602670746674204e-07 6.754421434313854 -0.1242374568585427 NQSLLASSEWPELRLS(ph)K ddPTM_A549_PD325901_60min_R1 1 NQSLLASSEWPELRLSK 17 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NQSLLASSEWPELRLS(1)K 101.6 4.5803e-09 4360100.0 3876.2 4031.8 3798.0 4932.3 4738.4 5424.6 4236.1 5126.5 4921.7 4958.1 5302.3 True False 4269.708970492379 4371.573935603328 4055.7551192293386 5236.956968933958 4405.591130592578 5380.423856120399 4397.307103582867 5024.247935838548 4714.858064672787 4645.044719845362 4650.150714049036 0.918187222963061 0.9400929570725371 0.8721771333079787 1.1261908034748342 0.9474082457762941 1.1570428975269689 0.9456267923312082 1.0804484079750984 1.0139151082626756 0.9989019723192525 1.0 12.183061760213404 -6.237203573733185 24.95603377369184 1.020556250967207 0.9131464859798724 0.4006654379445588 0.06585451027481536 589.3374410810663 606850.3878449522 0.008013099763401478 0.02119135598142738 5.791571552807735e-07 6.237203573733185 -0.10740976498733468 NQSPT(ph)EAEKPASSSLPSSPPPQLLTR ddPTM_A549_MK2206_60min_R1 1 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQS(0.43)PT(0.57)EAEKPASSSLPSSPPPQLLTR 116.36 2.0661999999999997e-17 39454000.0 2115.7 2062.2 2466.3 2187.0 3284.3 2782.3 2063.8 1609.5 4265.4 4176.9 3865.1 True False 2472.778436101217 2167.1571716316307 2816.0584254751634 2722.815098178159 2801.183820685903 3076.7211392587337 2438.765745740098 1837.651553887026 3299.293710444151 3233.3353890169637 2905.28899866674 0.8511299348312661 0.7459351453938511 0.9692868512452547 0.9371925131811948 0.9641670147002203 1.0590069148613668 0.83942277235045 0.6325193654505072 1.1356163576009901 1.1129135141119408 1.0 11.504465965058017 NQSPT(ph)EAEKPASSSLPSSPPPQLLTR ddPTM_A549_PD325901_60min_R1 1 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQS(0.104)PT(0.888)EAEKPAS(0.007)SSLPSSPPPQLLTR 129.9 3.7811e-24 78456000.0 5769.8 5942.1 4397.8 6577.3 6340.1 6886.3 5347.6 7356.2 6477.7 6688.3 6252.9 True False 6355.545848497734 6442.861620801767 4696.261154119741 6983.564882867897 5894.793248157606 6830.220255945488 5551.105844319003 7209.474820172738 6205.464795808544 6265.999596567579 5483.832940398927 1.1589605149487638 1.1748829132517435 0.856382972486778 1.2734824271214706 1.074940340492718 1.245519389481733 1.0122674969590124 1.3146780542968686 1.131592603796045 1.1426313793052478 1.0 12.420968906156848 -10.418384750952635 0.9754639090300279 1.0067720142900316 1.1354826124645487 0.0 0.1280137169044746 0.7217093846383462 1.3181036762428333 0.056479936013594724 0.020653566340516443 3.816060479226994e-11 10.418384750952635 0.12871059817451713 NQSPTEAEKPASSSLPS(ph)SPPPQLLTR ddPTM_A549_MK2206_60min_R1 1 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQSPTEAEKPAS(0.001)S(0.001)S(0.003)LPS(0.567)S(0.428)PPPQLLTR 107.91 8.3131e-13 42300000.0 1749.3 2045.8 2088.5 1489.4 2694.9 1671.9 1775.3 1689.0 2819.6 2947.9 2542.1 True False 2044.539073721158 2149.9224816816945 2384.6807045391397 1854.3030668617062 2298.483779912442 1848.8193482826007 2097.8490301445863 1928.420922345565 2180.9651019759744 2281.9673425945334 1910.8264116092 1.069976352273335 1.1251270490191414 1.2479839560783985 0.9704194245986516 1.2028741940911194 0.9675496094517658 1.0978752530314282 1.0092078017288593 1.1413727006940821 1.1942305845944308 1.0 10.899981007778312 -10.998618204056596 1.2121208017332858 0.9987595753105878 1.096858119943545 0.0 0.1018191794476822 0.7124079725095146 1.8231889688305156 0.05931205187433019 0.012817547768445866 1.0031867697294658e-11 10.998618204056596 0.0980985446329572 NQSPTEAEKPASSSLPS(ph)SPPPQLLTR ddPTM_A549_PD325901_60min_R1 2 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQSPTEAEKPASSS(0.005)LPS(0.575)S(0.42)PPPQLLTR;NQSPTEAEKPASSS(0.01)LPS(0.59)S(0.4)PPPQLLTR 155.55 5.3127e-41 119820000.0 11362.9 11211.2 12231.9 11058.7 14012.900000000001 13539.6 11918.7 13910.900000000001 15440.0 13769.0 15424.1 True False 12516.45324307514 12156.007169709817 13062.03029039003 11741.770782870051 13028.682245880631 13429.33798664007 12372.272650662893 13633.436186610072 14791.110494046334 12899.622990167758 13527.033481425753 0.9252918062383552 0.8986454558866495 0.9656241561260103 0.8680226007419082 0.963158867298627 0.9927777590763096 0.9146331061907634 1.0078659304961743 1.0934482060945816 0.9536180277723489 1.0 13.723557866248536 -8.419882764122441 4.2811952368212225 1.0444442063557005 0.9338555487453744 0.3697014535848765 0.04684326382517277 0.12659425875267807 3.9791387282306157 0.007504796535041394 0.009066430874789241 3.802920406227581e-09 8.419882764122441 -0.1105886576103261 NQSPTEAEKPASSSLPSS(ph)PPPQLLTR ddPTM_A549_MK2206_60min_R1 1 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQSPTEAEKPASS(0.003)S(0.008)LPS(0.084)S(0.905)PPPQLLTR 149.14 4.366e-33 42468000.0 7173.2 9293.5 9972.9 8330.1 15128.0 11082.0 10729.0 9834.0 14588.0 13441.0 12473.0 True False 8383.86079209777 9766.499454252045 11387.20718137341 10370.974873952398 12902.691239940423 12254.689884363765 12678.320421574528 11227.99961536192 11283.841292249092 10404.668764820088 9375.609862712543 0.8942203136503122 1.041692177603731 1.2145564233278445 1.1061653615940752 1.3761975411599974 1.307081892677886 1.3522662106490904 1.1975753876040065 1.2035314456850128 1.1097591428372233 1.0 13.194696822336034 -4.16855363936952 12.504783316699987 1.143063761799964 1.1482851716696105 0.0 0.1451942958516259 0.0 0.0 0.02118786370649683 0.0 6.783383342906007e-05 4.16855363936952 0.005221409869646587 NQSQS(ph)QDALVLEDVEK ddPTM_A549_MK2206_60min_R1 4 NQSQSQDALVLEDVEK 16 0 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NQSQS(1)QDALVLEDVEK;NQS(0.017)QS(0.983)QDALVLEDVEK;NQS(0.001)QS(0.999)QDALVLEDVEK;NQS(0.03)QS(0.97)QDALVLEDVEK 212.55 3.0470999999999997e-46 30746100.0 2672.3 3468.77 3100.93 3659.71 5711.400000000001 4365.87 4266.08 4594.549999999999 6698.16 5479.93 5363.14 True False 3123.318908537731 3645.3155766854097 3540.688502334955 4556.339114290627 4871.26062584583 4827.863465570044 5041.171514966043 5245.841532719254 5181.037454763583 4242.010007023326 4031.3243228660385 0.7747624994649976 0.9042476577755969 0.878294133332773 1.1302338262507574 1.208352450884588 1.1975874623100808 1.2505001114328755 1.3012700325211652 1.2851948987027084 1.0522621519093016 1.0 11.977038138346881 -6.263705378796785 3.2380587865206367 1.1687602722431278 0.8478263604085081 0.7196084875250282 0.09086601306965511 0.14036535478091416 3.049360588722843 0.017303874775886338 0.047434474934549255 5.448721635318467e-07 6.263705378796785 -0.3209339118346197 NQSQS(ph)QDALVLEDVEK ddPTM_A549_PD325901_60min_R1 4 NQSQSQDALVLEDVEK 16 0 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NQSQS(1)QDALVLEDVEK;NQS(0.021)QS(0.979)QDALVLEDVEK;NQSQS(1)QDALVLEDVEK;NQS(0.049)QS(0.951)QDALVLEDVEK 269.61 1.5170999999999997e-91 56756800.0 10209.929999999998 9660.27 9617.710000000001 11045.999999999998 13027.7 12220.6 11604.500000000002 12026.0 12993.9 12098.1 12072.3 True False 11246.43457744679 10474.374855620514 10270.425636588523 11728.286332713838 12112.679295125143 12121.07948532702 12046.115597726066 11786.131995785514 12447.811570504446 11334.223901325338 10587.483632614934 1.0622386742400192 0.9893167459880658 0.9700535077995579 1.1077501264403036 1.1440564836210765 1.144849891242128 1.1377694658830726 1.1132137158142206 1.1757101122837854 1.0705304767990438 1.0 13.370072118819932 -6.272403642712512 24.335130425517015 1.1008141205438002 1.0054143542352814 0.46046616986512323 0.049364259022566755 497.65873527046926 1104552.4569757597 0.009932642166757433 0.023301093949766906 5.340677544986206e-07 6.272403642712512 -0.09539976630851887 NQSQS(ph)QDALVLEDVEKK ddPTM_A549_MK2206_60min_R1 2 NQSQSQDALVLEDVEKK 17 1 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NQS(0.056)QS(0.944)QDALVLEDVEKK;NQS(0.007)QS(0.993)QDALVLEDVEKK 181.82 1.6113e-39 19045800.0 4195.5 5057.0 5390.0 5924.700000000001 7294.1 5742.8 5203.200000000001 5361.8 8354.1 7659.299999999999 7879.7 True False 4903.597829873163 5314.379699806594 6154.3830488225785 7376.251765969891 6221.147552435843 6350.499284237882 6148.554088688283 6121.851569823834 6461.909688756382 5929.058810385122 5922.953021343377 0.8278974714476098 0.8972517054678996 1.0390734193982702 1.2453672584249018 1.050345584376226 1.072184645286539 1.038089288659213 1.033580976881587 1.0909945875766485 1.0010308690647627 1.0 12.532100927920826 -5.694806912063788 3.5463431869445614 1.0589844780556235 0.8441907805776201 0.6051713123929567 0.06356179754014078 0.12000224819265821 2.9303247702860777 0.00913323433177773 0.04090200255886287 2.0192639317149687e-06 5.694806912063788 -0.21479369747800336 NQSRS(ph)PIK ddPTM_A549_MK2206_60min_R1 2 NQSRSPIK 8 1 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 NQS(0.062)RS(0.938)PIK;NQS(0.027)RS(0.973)PIK 61.213 0.0030503 131730000.0 10668.0 12788.900000000001 12231.2 10744.9 15720.7 12363.5 12891.2 12154.3 18143.0 19449.0 19457.6 True False 12468.497592441157 13439.800384191527 13965.768079176014 13377.40098235689 13408.20585508536 13671.797363772914 15233.364173604397 13877.20924598266 14033.639468417543 15055.457392082873 14625.740917559166 0.8525036552146158 0.9189141568928082 0.9548759381078048 0.914647747267042 0.916753956648304 0.9347763946344093 1.041544784600672 0.9488209400265087 0.9595164817646423 1.0293808345810231 1.0 13.836222090810482 -7.538618928631479 24.88469547096952 0.9819029620203098 0.9156527218310307 0.5621222901873497 0.03473732313573355 144.12235617782252 227851.73744901686 0.004924738531457114 0.00730570079910576 2.8932174203851538e-08 7.538618928631479 -0.06625024018927905 NQSRS(ph)PIK ddPTM_A549_PD325901_60min_R1 3 NQSRSPIK 8 1 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 NQS(0.032)RS(0.968)PIK;NQS(0.016)RS(0.984)PIK;NQS(0.062)RS(0.938)PIK 67.08 0.0022802 206816000.0 18322.5 16650.1 17755.2 19552.3 24390.6 21795.3 19741.0 23077.0 23107.5 21524.0 24660.6 True False 20182.5867116884 18053.262360531036 18960.174642691094 20760.00116450487 22677.488399002057 21617.80630300869 20492.254557689692 22616.711131443713 22136.372133495835 20164.970966691173 21627.502536423373 0.933190814690621 0.8347363423089246 0.8766696298271068 0.9598889714400669 1.0485486412871934 0.9995516711465712 0.9475090581160823 1.0457384570111317 1.0235288192067236 0.9323763080240487 1.0 14.400579457408572 -6.41610966686909 3.367342598372435 1.0103418826705457 0.8768485723830538 0.6058460485059048 0.04082195825552357 0.08619516822920728 1.8194932615655413 0.004527242953854169 0.011201666100671496 3.836103650079523e-07 6.41610966686909 -0.1334933102874919 NQSRS(ph)PIKR ddPTM_A549_MK2206_60min_R1 2 NQSRSPIKR 9 2 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 NQS(0.022)RS(0.978)PIKR;NQS(0.086)RS(0.914)PIKR 69.45100000000001 0.00082237 87346000.0 4861.7 6174.7 6568.7 6245.200000000001 9227.900000000001 6925.9 6149.799999999999 6144.3 8399.8 8910.099999999999 7912.900000000001 True False 5682.236102846943 6488.965855723906 7500.240432801644 7775.274280357681 7870.48813412521 7658.794140959664 7267.139055699417 7015.273341129577 6497.258711724281 6897.302221666796 5947.908545069996 0.9553334688638986 1.0909659767889963 1.260987854128712 1.3072282839322273 1.3232362391733092 1.2876449062599926 1.2217973764446806 1.1794521196773076 1.0923602241849568 1.1596180690074191 1.0 12.538166749371124 -8.994598748185602 1.2472556526650735 1.0280893153314472 1.216037501140764 0.15697384703179695 0.10883654275455085 0.32673920107862864 1.032897157840667 0.023957158833154864 0.02310759925368791 1.012514501040533e-09 8.994598748185602 0.18794818580931683 NQSRS(ph)PIKR ddPTM_A549_PD325901_60min_R1 2 NQSRSPIKR 9 2 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 NQS(0.318)RS(0.682)PIKR;NQS(0.471)RS(0.529)PIKR 67.252 0.001027 109392000.0 4807.1 5299.9 5819.4 6109.0 7016.5 6455.0 7040.5 6424.2 6841.3 6249.3 6370.7 True False 5295.113253200019 5746.5411730006645 6214.339478895001 6486.339055454364 6523.685245610934 6402.432620148427 7308.43008020943 6296.064291312591 6553.783952261603 5854.71813148779 5587.144287194649 0.9477316104644111 1.028529223090111 1.1122568452613333 1.1609399582395978 1.167624265684846 1.1459221904868937 1.3080797102304749 1.1268841411063497 1.1730114017786197 1.0478909851865472 1.0 12.447895362826282 -5.532511722938038 2.4300927882446066 1.1183814283928746 0.9464343189863 0.3659449693030995 0.07577786844327869 0.3820369767545634 3.859328920381694 0.013111399057999304 0.10635326387668467 2.934190300105214e-06 5.532511722938038 -0.17194710940657454 NQTYS(ph)FSPSK ddPTM_A549_PD325901_60min_R1 1 NQTYSFSPSK 10 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 NQT(0.132)YS(0.682)FS(0.17)PS(0.017)K 163.51 5.4408000000000005e-09 48304000.0 12838.0 13486.0 15438.0 16329.0 18339.0 16014.0 15449.0 13828.0 15226.0 13451.0 13835.0 True False 14141.304309163901 14622.512549121107 16485.715516235527 17337.605244150313 17050.931906115416 15883.587293424784 16036.920149017174 13552.189692143862 14586.104169841292 12601.701564437974 12133.382707290875 1.1654873706956 1.2051472290851364 1.358707288308755 1.4289176944639068 1.4052908671437205 1.309081537820482 1.3217188096589658 1.1169341657706415 1.2021465506957587 1.0385975509423013 1.0 13.566694199973591 -9.534258302214994 0.5043699991906844 1.0058385950806519 1.3190899712300448 0.6091568228926998 0.0862479174528021 0.44364710501162236 0.2527250810912054 0.05652872498792002 0.028552314316557175 2.922413717796959e-10 9.534258302214994 0.3132513761493929 NQTYSFS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 NQTYSFSPSK 10 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 NQT(0.003)YS(0.015)FS(0.982)PSK;NQT(0.002)YS(0.018)FS(0.973)PS(0.007)K 200.93 1.8219000000000002e-19 39071000.0 10607.2 12846.9 13040.0 13501.9 20684.8 14878.0 15629.7 15954.4 21340.0 20177.6 20986.0 True False 12397.436038858448 13500.752336453492 14889.26808101048 16809.866106123314 17642.093320988864 16452.3800847829 18469.41417588624 18215.985058300823 16506.524072977478 15619.466146048186 15774.597015865089 0.7859114262247012 0.8558540242185135 0.9438762883156887 1.0656288771888764 1.1183863082680063 1.042966743824653 1.1708327101675482 1.1547670625107151 1.046399097002368 0.9901657792169979 1.0 13.945315529566209 -5.86943306447544 1.9741820863251556 1.0531834225774042 0.797874640736255 0.7403971834814013 0.05799969882400148 0.16279405778995312 1.194175209708924 0.009477877825056265 0.048606294919367785 1.3507249919526143e-06 5.86943306447544 -0.25530878184114913 NQTYSFS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 NQTYSFSPSK 10 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 NQTYS(0.022)FS(0.977)PSK 194.29 1.92e-16 40885000.0 15034.0 14956.0 15583.0 16886.0 20092.0 17105.0 15920.0 14943.0 15638.0 14350.0 15341.0 True False 16560.240612554153 16216.394608086555 16640.55608819136 17929.009869111538 18680.807233637104 16965.702551144666 16525.844311758272 14644.950142443278 14980.78924260987 13443.938551013682 13454.154254611438 1.2308644823867765 1.2053076173501098 1.236834049415464 1.3326002905731762 1.3884787464239323 1.261001043252469 1.2283079262372814 1.088507673191252 1.1134694131721565 0.9992407026555196 1.0 13.715764083717872 -8.461591524606625 1.0058593338070851 1.0407097761536555 1.2804786197117393 0.7846642762861313 0.05578682565037727 0.18506370178617101 0.3662604203731306 0.013388415469195817 0.01615293277575621 3.4546851676676977e-09 8.461591524606625 0.2397688435580838 NQVALNPQNTVFDAK ddPTM_A549_MK2206_60min_R1 2 NQVALNPQNTVFDAK 15 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 204.49 1.6378e-38 3910700.0 2262.7 2609.7 2987.6000000000004 3068.3 4339.1 3132.8999999999996 2757.1000000000004 3230.5 4638.7 4408.1 4315.7 False True 2644.5884422962704 2742.5225830700556 3411.2866042045166 3820.0336377412223 3700.824137971011 3464.4213985492875 3258.0293815195405 3688.4332679913236 3588.041856481756 3412.3071484415887 3243.9925827393954 0.815226414624858 0.8454157995497411 1.0515704081307884 1.177571631349227 1.140823859358471 1.067949851976465 1.0043270132166244 1.1370042236276074 1.1060573552396435 1.0518850032511664 1.0 11.663554805555952 -5.757086992055908 4.755392172778441 1.0701310143694385 0.8237588463849834 0.7630074763684688 0.05393456058494015 0.07530227884489049 4.375862613244989 0.008850526436545473 0.03333540920444379 1.749496217866417e-06 5.757086992055908 -0.24637216798445505 NQVALNPQNTVFDAK ddPTM_A549_PD325901_60min_R1 2 NQVALNPQNTVFDAK 15 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 140.31 1.7874999999999998e-10 1865760.0 2644.7 2960.5 2772.2 3218.8 4017.9 3462.5 3462.7 3859.1 3712.5 3471.1 3499.0 False True 2913.1879970747614 3209.991724875655 2960.3381625928287 3417.617965574808 3735.696565002518 3434.3025479882144 3594.4749433621455 3782.1272230946165 3556.476535566514 3251.9341536183665 3068.6451819884924 0.9493401238350423 1.0460615465472518 0.9647052647105064 1.113722103042288 1.2173765109532064 1.1191592198882945 1.171355673331028 1.2325071811149524 1.1589728771646077 1.0597296072891367 1.0 11.583386125716125 -6.269173969756086 23.55662072145074 1.1100762977322542 0.992638234983623 0.4465147804406935 0.06935095045709416 271.1124011893065 825708.1699616072 0.01253251419433603 0.029674462160117827 5.380542054977406e-07 6.269173969756086 -0.11743806274863122 NQVAMNPTNTVFDAK ddPTM_A549_MK2206_60min_R1 5 NQVAMNPTNTVFDAK 15 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;; 157.52 4.6042e-19 6996770.0 4562.200000000001 5026.0 5676.299999999999 6561.799999999999 7471.299999999999 6246.299999999999 5455.4 5328.1 9200.7 8671.6 7777.200000000001 False True 5332.187824918922 5281.8019322183 6481.284693883413 8169.44129457039 6372.281667171265 6907.279320041633 6446.575564158606 6083.374491621912 7116.756140498776 6712.6795373122395 5845.906600199471 0.912123335110585 0.9035043310541563 1.1086876915998387 1.3974635335931704 1.0900416484508724 1.181558275290602 1.1027503525182287 1.0406212256990794 1.2173913521396225 1.1482700625225852 1.0 12.51321106411302 -5.774607846475523 6.771617568394643 1.1250525371551319 0.9066158549058565 0.4411103527062269 0.10051789899930566 0.10998742925871142 22.46516590132066 0.01571138699472557 0.053268753393290784 1.6803206071264907e-06 5.774607846475523 -0.21843668224927537 NQVAMNPTNTVFDAK ddPTM_A549_PD325901_60min_R1 3 NQVAMNPTNTVFDAK 15 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;; 150.21 7.0346e-14 13061700.0 6588.1 6445.5 6730.700000000001 6761.7 8228.2 8314.8 7157.5 8468.1 7540.200000000001 7866.1 7363.0 False True 7256.919062097111 6988.684905484213 7187.485776987071 7179.354852065114 7650.279617748995 8247.087025563153 7429.882579234281 8299.197102404067 7223.311615751826 7369.43310356298 6457.39767790262 1.1238147972410735 1.0822757485418115 1.1130622791876101 1.11180311484192 1.1847310634016623 1.277153342093967 1.15060012559851 1.2852231682747575 1.118610309609734 1.1412388505638067 1.0 12.656737162648874 -9.891843789800049 1.0097632882628746 1.0167754617430482 1.1618813227390201 0.10919101207382564 0.07364592580712823 0.3197772043500406 0.6648555386981738 0.023167256425847153 0.013265676339971966 1.282791903613178e-10 9.891843789800049 0.1451058609959719 NQVEEDAEDS(ph)GEADDEEKPEIHKPGQNSFSK ddPTM_A549_MK2206_60min_R1 1 NQVEEDAEDSGEADDEEKPEIHKPGQNSFSK 31 2 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK 142.04 1.3109999999999998e-36 25324000.0 725.18 722.38 919.08 960.3 1076.2 815.24 787.18 727.85 1241.1 1195.9 1291.1 True False 847.5726550512265 759.14605646555 1049.419364102385 1195.5735431095056 917.8924056335195 901.5081556874851 930.2004165770378 831.0249664471402 959.9928316294444 925.7453594113789 970.48423745275 0.8733502537618416 0.78223429826959 1.081335815259419 1.2319350453826559 0.9458086697448386 0.9289261184227908 0.9584910096206756 0.8562992930501876 0.9891895144522465 0.953900458848463 1.0 9.922560970736926 NQVEEDAEDS(ph)GEADDEEKPEIHKPGQNSFSK ddPTM_A549_PD325901_60min_R1 2 NQVEEDAEDSGEADDEEKPEIHKPGQNSFSK 31 2 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK;NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK 159.2 7.280100000000001e-47 30203000.0 2854.9 3905.3 3461.7 3742.3 3556.5 3563.3 3348.5 4431.4 5316.0 4055.7 5322.2 True False 3144.7273463337 4234.4133366515425 3696.631778893154 3973.4533716200435 3306.70370925893 3534.2816662083505 3475.928999869507 4343.01225063395 5092.58700688797 3799.6224098499074 4667.603140205528 0.6737349452968336 0.9071922375270939 0.7919764529789011 0.85128346439605 0.7084372021211139 0.7571941229889407 0.7446924889412196 0.9304587644190151 1.091049700224456 0.8140414460520308 1.0 12.188466186753415 -8.47856064400201 3.6973916832997786 1.042543171461073 0.7823132496408568 0.41415064232335375 0.0938116633795301 0.07958081929713388 2.2459845456147596 0.011080929847725728 0.013194955586990957 3.3223038999298873e-09 8.47856064400201 -0.2602299218202161 NQVIPRT(ph)PSSFR ddPTM_A549_MK2206_60min_R1 2 NQVIPRTPSSFR 12 1 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 NQVIPRT(0.934)PS(0.053)S(0.013)FR;NQVIPRT(0.946)PS(0.025)S(0.029)FR 58.07899999999999 0.0051005 13099500.0 2115.98 2772.4 2311.4 2457.5 2466.7 2378.6000000000004 2308.5099999999998 1993.9099999999999 3263.7 3868.8 3960.2999999999997 True False 2473.105693255874 2913.5033181221693 2639.19127626132 3059.587610321366 2103.8516976177316 2630.301873213105 2727.9363851625517 2276.552848593278 2524.477161057949 2994.835393001708 2976.848211280402 0.8307799114124605 0.978720818576441 0.8865723372325225 1.0277942955665098 0.7067379820191849 0.8835861577509723 0.9163841054526631 0.7647527475423703 0.8480369108145157 1.0060423577034077 1.0 11.539569945466816 -10.745511718064371 1.0516273400603096 0.998396322938158 0.8728020974535421 0.2595701228019637 0.08502221437433989 0.586585158741499 1.1750270920599617 0.052704767528849186 0.014231845636050901 1.796752599827674e-11 10.745511718064371 -0.12559422548461596 NQVIPRT(ph)PSSFR ddPTM_A549_PD325901_60min_R1 2 NQVIPRTPSSFR 12 1 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 NQVIPRT(0.908)PS(0.039)S(0.053)FR;NQVIPRT(0.788)PS(0.096)S(0.116)FR 61.732 0.0031612 29694000.0 3612.6000000000004 4053.3 4170.8 4511.4 4327.799999999999 5059.9 4675.9 4919.8 4969.799999999999 3971.5 4965.0 True False 3979.3484925444423 4394.8858160575855 4453.855569057852 4790.058931867211 4023.8302580994778 5018.6938520045005 4853.843933250656 4821.670729491566 4760.93658894504 3720.7388122195684 4354.336475728171 0.9138817164741455 1.0093124039805936 1.022855168378562 1.1000663266534025 0.9240972259560114 1.152573734248507 1.1147149422895606 1.1073261692954592 1.0933782025076217 0.8544904218954171 1.0 12.088237178892012 -4.396232513233474 0.8975056168700368 1.0576362066713891 0.4114392195196169 0.14054328880944955 0.08563652937218046 8.05818249286323 1.5524884951980753 0.009694603613951391 7.41439813842297 4.015757570528529e-05 4.396232513233474 -0.6461969871517722 NQVVSS(ph)TNGELNTDDPTAGR ddPTM_A549_MK2206_60min_R1 2 NQVVSSTNGELNTDDPTAGR 20 0 H0YBN6;Q9Y6M4-6;Q9Y6M4-5;Q9Y6M4-3;Q9Y6M4-4 H0YBN6 CSNK1G3 Casein kinase I isoform gamma-3 1 NQVVS(0.031)S(0.952)T(0.017)NGELNTDDPTAGR;NQVVS(0.021)S(0.975)T(0.004)NGELNTDDPTAGR 190.55 4.2038e-44 6543100.0 702.62 1580.4099999999999 1358.5 1336.79 2200.32 1521.3200000000002 1340.4099999999999 1249.45 2320.2 2188.74 1699.78 True False 821.2050785902715 1660.8461185231047 1551.1557276114047 1664.3036100107836 1876.6558427462792 1682.305072629515 1583.9451464519252 1426.5633637801463 1794.6784045980476 1694.3021138540523 1277.6777144585517 0.6427325680782324 1.2998944097783927 1.2140430329637129 1.3026004845956591 1.46880220380267 1.3166896891071114 1.2397063269771142 1.1165283291997377 1.4046409233635166 1.3260794132048048 1.0 10.319308256792894 -5.257312773733081 24.557549742284838 1.2315109426485134 0.6427322685925323 0.6562301005144475 0.12770719465949332 201.6185446030344 1199776.2828017797 0.02255064354882017 0.2393604601841429 5.529517365012978e-06 5.257312773733081 -0.588778674055981 NQYDNDVTVWS(ph)PQGR ddPTM_A549_PD325901_60min_R1 1 NQYDNDVTVWSPQGR 15 0 P25786;P25786-2;B4DEV8 P25786 PSMA1 Proteasome subunit alpha type-1;Proteasome subunit alpha type 1 NQYDNDVT(0.002)VWS(0.998)PQGR 80.387 0.00039703 4255700.0 2982.2 3632.7 3740.7 2980.5 3033.8 3801.1 3295.8 3613.8 3644.6 3748.4 4082.2 True False 3284.9507486203943 3938.840377961758 3994.566396656447 3164.5987157933737 2820.716354041822 3770.1451018506873 3421.2234725309618 3541.7199240287446 3491.4301364379053 3511.7253842940554 3580.1152791978907 0.9175544619212299 1.1001993150467038 1.115764740835779 0.8839376581478092 0.7878842255252159 1.0530792468491048 0.9556182429124104 0.989275385797703 0.9752284114214739 0.9808972925254078 1.0 11.805790327472698 -9.958299575149324 0.0015074930478586731 1.6282789192545233 0.34038784779462994 0.0 0.0902333806088858 2023393.6282788822 1019.4498291054005 437520.45942651253 433419.9664499357 1.1007797327366424e-10 9.958299575149324 -1.2878910714598932 NQYVPYPHAPGS(ph)QR ddPTM_A549_MK2206_60min_R1 3 NQYVPYPHAPGSQR 14 0 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 NQYVPYPHAPGS(1)QR;NQYVPYPHAPGS(1)QR;NQYVPYPHAPGS(1)QR 130.87 2.8529e-09 77755000.0 3426.1000000000004 4265.4 4453.700000000001 3519.7 5213.1 4669.9 3332.9 4696.299999999999 6100.4 5568.299999999999 5313.0 True False 4004.34191989714 4482.490641003572 5085.301629784999 4382.0266580053385 4446.259895751812 5164.065718371262 3938.4447882436143 5362.014906815555 4718.669140337009 4310.417162647697 3993.6354686596414 1.0026808784430923 1.12240856136727 1.27335147879477 1.097252539044594 1.1133364401043049 1.2930738819045107 0.9861803409827612 1.3426400453657765 1.1815472837636596 1.079321634754605 1.0 11.963486937033815 -10.67174591237492 1.0121436829493446 1.002879139587878 1.1602940400221393 0.13231257475936076 0.10965615946797337 0.5763746943414422 1.0795633517230276 0.06206926689413415 0.017732392138534094 2.1293844958556524e-11 10.67174591237492 0.15741490043426132 NQYVPYPHAPGS(ph)QR ddPTM_A549_PD325901_60min_R1 4 NQYVPYPHAPGSQR 14 0 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 NQYVPYPHAPGS(1)QR;NQYVPYPHAPGS(1)QR;NQYVPYPHAPGS(1)QR;NQYVPYPHAPGS(1)QR 152.0 1.0177e-13 145278900.0 10326.099999999999 10975.3 11276.2 12055.3 14347.099999999999 12371.599999999999 12022.900000000001 14315.999999999998 13659.7 13378.4 14538.099999999999 True False 11374.398070326954 11900.2270488187 12041.470741299074 12799.92850142724 13339.409190808034 12270.8497913909 12480.438038683324 14030.456149315256 13085.630311886309 12533.685540827966 12750.005864609004 0.8921092422317694 0.9333507117711147 0.9444286433407332 1.003915499125911 1.0462276905954273 0.9624191487983447 0.9788574351425252 1.1004274271167576 1.0263234739529743 0.983033707899579 1.0 13.638210290228907 -6.024532109582194 1.5715953209282352 1.0156098801670392 0.9026577000284535 0.5587459037695548 0.03623892880404106 0.23328065087116767 1.041452087476957 0.005135759618202322 0.025694180628865745 9.450785154347292e-07 6.024532109582194 -0.11295218013858577 NRAS(ph)VANGGEK ddPTM_A549_MK2206_60min_R1 2 NRASVANGGEK 11 1 A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2 A0A3B3IRR6 C8orf33 UPF0488 protein C8orf33 1 NRAS(1)VANGGEK;NRAS(1)VANGGEK 77.068 0.00032747 34442000.0 2947.2 3464.7 2930.4 2310.24 3937.7 3308.6800000000003 3003.3 3272.9 4652.2 3601.5 4298.0 True False 3444.615307878008 3641.0384310697887 3345.974784094564 2876.2489037106147 3358.4695462396467 3658.802321475969 3548.96073465512 3736.8435978358793 3598.4841280368264 2787.9186486496196 3230.687981234547 1.0662172663798108 1.1270164287664926 1.0356849078368633 0.8902899074182676 1.0395524314781617 1.132514914076545 1.0985154726390356 1.1566711547327806 1.1138445275243614 0.8629489027857988 1.0 11.65762570698853 -7.018722209802181 24.788337920821093 1.0727912026827633 1.0281355855012968 0.015820716178380434 0.09173493952947144 1583.2501690456133 2096235.5150950693 0.011546482190592521 0.020218230541573116 9.578065225206929e-08 7.018722209802181 -0.04465561718146649 NRAS(ph)VANGGEK ddPTM_A549_PD325901_60min_R1 2 NRASVANGGEK 11 1 A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2 A0A3B3IRR6 C8orf33 UPF0488 protein C8orf33 1 NRAS(1)VANGGEK;NRAS(1)VANGGEK 121.42 2.8743e-06 45314000.0 7441.9 7125.6 8061.3 7554.4 9734.2 8873.3 8081.4 10180.1 8631.0 7917.3 9246.3 True False 8197.396209562778 7726.099319295371 8608.388294534881 8021.018130712785 9050.503373166954 8801.038786733236 8388.942099311766 9977.049919366042 8268.269085111002 7417.400326825126 8109.06371712495 1.0108930568952472 0.9527732903342683 1.0615761072829462 0.9891423240113124 1.1160972078754103 1.085333534640621 1.0345142660053046 1.230357815329065 1.0196330148016766 0.914704901277425 1.0 12.985319633304567 -5.765577373637572 24.99805440116577 1.0393317200452914 0.9818331717166543 0.08985002357557303 0.07786520953867218 184.49555041276693 1114589.053699747 0.009951940119613582 0.032624280628296864 1.715626028014614e-06 5.765577373637572 -0.0574985483286371 NRDS(ph)DKTDTDWR ddPTM_A549_MK2206_60min_R1 4 NRDSDKTDTDWR 12 2 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 NRDS(0.913)DKT(0.064)DT(0.022)DWR;NRDS(0.985)DKT(0.014)DT(0.001)DWR;NRDS(0.76)DKT(0.026)DT(0.214)DWR;NRDS(0.881)DKT(0.033)DT(0.086)DWR 97.904 8.291200000000001e-05 65516000.0 5588.07 6049.17 4579.15 4622.71 9179.6 7221.599999999999 6436.11 6766.16 8943.2 8595.1 9899.4 True False 6531.199600805464 6357.046914905887 5228.542326162507 5755.274157521337 7829.293000142588 7985.784918689884 7605.467876642743 7725.283900495957 6917.579479355775 6653.4609404438 7441.105770459113 0.8777189576761643 0.854314817045486 0.7026566329589895 0.77344340143229 1.0521679494497393 1.0731986837753502 1.0220883980491369 1.038190309182947 0.9296440196856607 0.8941494914449098 1.0 12.861301310702311 -6.754401802391225 24.99997247406751 0.9889231893265674 0.7986694582448468 0.6828259546305755 0.06498131708059633 78.53620773743792 278985.8848011506 0.009571513741652727 0.019595276872362007 1.7603466478822268e-07 6.754401802391225 -0.1902537310817206 NRDS(ph)DKTDTDWR ddPTM_A549_PD325901_60min_R1 1 NRDSDKTDTDWR 12 2 E7EX17;P23588;P23588-2;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 NRDS(0.552)DKT(0.221)DT(0.228)DWR 57.148 0.0030510000000000003 11130000.0 3350.4 3659.9 4246.0 3128.6 4060.2 4756.8 4068.0 3438.6 4987.4 3533.6 4881.9 True False 3690.5301415658782 3968.3326174201675 4534.159093272188 3321.846516433871 3775.0255589295916 4718.062197912014 4222.809966095015 3370.0144254704865 4777.796922150691 3310.487892952053 4281.457248913864 0.861979911746662 0.9268649403020126 1.0590223911315315 0.7758681970435579 0.8817151122756754 1.1019757815189934 0.9863020276954239 0.7871185508918499 1.1159277424439402 0.7732152163359496 1.0 12.063886204642992 -8.78799468746474 24.998974016581556 1.0547436532763967 0.9291428903846185 0.0 0.13018701934725846 230.03360778116738 216550.88547151565 0.017681790402341382 0.018826242888528816 1.629315963230423e-09 8.78799468746474 -0.12560076289177824 NREEEWDPEYT(ph)PK ddPTM_A549_MK2206_60min_R1 4 NREEEWDPEYTPK 13 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK 196.78 9.2351e-31 341609400.0 24169.39 25132.58 19190.65 18639.1 46172.899999999994 35321.2 33780.2 33616.9 48283.399999999994 42329.100000000006 42275.3 True False 28248.59214714769 26411.720972071424 21912.17273764138 23205.680336740985 39380.92757487075 39058.86593968502 39917.625082008766 38382.198522438484 37347.28699274605 32766.926911163293 31777.17627107604 0.8889585376048623 0.8311538050695738 0.6895569496395467 0.7302625047230225 1.2392834164662936 1.2291484179239947 1.256172818550346 1.2078542849439524 1.1752865224447266 1.031146588722804 1.0 14.955703311639637 -6.755330109553623 24.999842571527765 1.1278021136293752 0.781464670281903 0.7824116006603228 0.09468115316471581 67.28642290551565 275341.0313655356 0.01665753792734889 0.033992495758159075 1.7565879145377242e-07 6.755330109553623 -0.3463374433474722 NREEEWDPEYT(ph)PK ddPTM_A549_PD325901_60min_R1 4 NREEEWDPEYTPK 13 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NREEEWDPEY(0.002)T(0.998)PK;NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK 207.52 2.0140999999999995e-31 545634000.0 17091.300000000003 14921.2 15141.8 16842.0 17579.8 18939.5 15992.899999999998 15814.3 21313.200000000004 18763.399999999998 22495.0 True False 18826.396194049947 16178.661889955945 16169.413603040226 17882.292089042792 16345.055495017608 18785.262991371208 16601.518561150686 15498.871380421644 20417.48032264949 17578.67572181813 19728.257607553915 0.9542858050901237 0.8200755592202509 0.819606775453347 0.9064303824882991 0.8285098370146543 0.9522008159594573 0.8415096199267995 0.7856178527640045 1.0349358128227033 0.8910404594011022 1.0 14.267975922942684 -8.775539131260015 24.999919623691397 1.016497482801582 0.8631014300378055 0.32585347910928886 0.06459089281619214 98.89495058611917 175347.59422482798 0.00868855135904457 0.009271514645440656 1.6767212512333442e-09 8.775539131260015 -0.15339605276377655 NRENS(ph)PSSQSAGLSSINK ddPTM_A549_MK2206_60min_R1 1 NRENSPSSQSAGLSSINK 18 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 NRENS(0.916)PS(0.066)S(0.018)QSAGLSSINK 165.32 7.6176e-24 15504000.0 3952.8 5120.4 4245.6 4474.3 6514.2 4816.0 4137.6 4969.5 7038.7 6377.5 6870.2 True False 4619.936003318471 5381.006489003302 4847.689920608746 5570.503700858957 5555.969809308557 5325.625923397929 4889.3483620380985 5673.941843455467 5444.445688494216 4936.818320633887 5164.139732126004 0.8946187057212932 1.0419947499731996 0.9387216791310603 1.0786895765435958 1.0758751888034683 1.0312706858544751 0.9467885486563359 1.0987196586021861 1.0542793128978356 0.9559807783515316 1.0 12.334312322510497 -4.322415267545104 1.2435177228274752 1.0298290139360784 1.7004282998664843e-12 0.2973889201663862 0.0540685621189167 10.476458831617613 2.2664848168319707 0.00696305163654021 24.0303565507002 4.759756465341093e-05 4.322415267545104 -1.029829013934378 NRENS(ph)PSSQSAGLSSINK ddPTM_A549_PD325901_60min_R1 1 NRENSPSSQSAGLSSINK 18 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 NRENS(0.955)PS(0.043)S(0.003)QSAGLSSINK 188.49 1.7579000000000001e-40 22247000.0 6281.3 7022.5 6273.5 6630.1 8466.4 7081.8 6836.6 7194.9 7455.5 7404.0 7822.4 True False 6918.972951951335 7614.310720465895 6699.257435620126 7039.626218950399 7871.749271494389 7024.128168763305 7096.770554131063 7051.392075210141 7142.171262199636 6936.510176425453 6860.294390279158 1.0085533591321274 1.1099102002466772 0.9765262326224343 1.0261405441908367 1.1474360754326278 1.023881450148305 1.0344702647435926 1.0278556099869072 1.0410881597617574 1.0111096961457355 1.0 12.74405477159705 -10.606483934534657 0.4172473152366432 0.9885027570977619 1.0486782547939364 0.1013727853023968 0.04465974697973922 3.226309391648356 0.7638364506860933 0.08336235603784391 0.013036183706541285 2.4746630026244074e-11 10.606483934534657 0.060175497696174474 NRENS(ph)SPCQGNGEQAGR ddPTM_A549_PD325901_60min_R1 1 NRENSSPCQGNGEQAGR 17 1 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 NRENS(0.711)S(0.289)PCQGNGEQAGR 68.639 0.00046944 10548000.0 347.78 460.88 483.68 388.97 240.48 373.86 555.18 466.26 538.77 442.22 573.21 True False 383.08636957789577 499.71997505850044 516.5054334041195 412.9957934850356 223.58951441096218 370.815408112888 576.3076787061531 456.96007852610586 516.1273705231438 414.29815373026287 502.7088038775714 0.7620442821430908 0.994054552464534 1.0274445751101426 0.82154080115457 0.4447694424413038 0.737634601289369 1.1464045870310753 0.908995575572599 1.026692523667917 0.8241314863289327 1.0 8.973579144770396 -7.749578403921352 24.99287384095286 1.0126286746919058 0.8022851754593756 0.23248036972072994 0.16124062281019907 220.4206486691377 464458.4533140146 0.02437447037023481 0.035993199798530585 1.7800065322390356e-08 7.749578403921352 -0.21034349923253015 NRENSS(ph)PCQGNGEQAGR ddPTM_A549_PD325901_60min_R1 1 NRENSSPCQGNGEQAGR 17 1 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 NRENS(0.376)S(0.624)PCQGNGEQAGR 88.176 2.0559e-06 11797000.0 570.37 307.12 369.62 516.72 426.09 535.24 513.21 592.53 461.19 367.13 383.38 True False 628.2735425157985 333.0020802377336 394.70463590562093 548.6366208437354 396.1629083307004 530.8811828982562 532.7404873892874 580.7115243192072 441.80778813142643 343.94934914520235 336.22669044605516 1.8686010372415685 0.9904094163255046 1.1739241622429974 1.6317461892031433 1.1782613325703883 1.578938252028602 1.5844681654586292 1.7271428498100678 1.3140175979048603 1.0229686069505723 1.0 8.393290443336813 -9.846827244453024 1.018936780949897 1.0470509909470083 1.4388883576483538 0.3038969886791576 0.253324123496386 0.42421384863374384 0.9008040573460985 0.0818392992364986 0.04847100939781795 1.4228946797950687e-10 9.846827244453024 0.3918373667013455 NREPVQLETLSIR ddPTM_A549_MK2206_60min_R1 2 NREPVQLETLSIR 13 1 J3QLI9;P62314 J3QLI9 SNRPD1 Small nuclear ribonucleoprotein Sm D1 0 ; 101.43 0.00014437 4204400.0 1090.41 1135.59 1158.9 1194.44 1732.29 1282.78 1016.4399999999999 1278.79 1972.21 1305.17 1665.8 False True 1274.4445500350369 1193.386680502941 1323.2494462486993 1487.07785362045 1477.4724357506864 1418.522928159551 1201.11399098753 1460.0623986301266 1525.5075839722078 1010.3311905200683 1252.1358862588422 1.01781648782773 0.9530808066435719 1.0567938039076028 1.1876329637540957 1.1799617373519333 1.132882575866301 0.9592521100694938 1.1660574660091658 1.218324305463484 0.8068862186665354 1.0 10.290175421847762 -5.977781059595669 6.026800652238657 1.1119253943926957 0.988462788924326 0.044275248912286735 0.11911922158707942 0.1937562297132906 23.625761363677746 0.013151830440618266 0.04071965044764672 1.052492331915763e-06 5.977781059595669 -0.12346260546836962 NREPVQLETLSIR ddPTM_A549_PD325901_60min_R1 2 NREPVQLETLSIR 13 1 J3QLI9;P62314 J3QLI9 SNRPD1 Small nuclear ribonucleoprotein Sm D1 0 ; 157.86 1.9797e-18 10078200.0 1874.76 1546.0500000000002 1974.04 1892.27 2448.7 1900.82 1745.88 1897.4 2330.8999999999996 1974.99 2327.9 False True 2065.084255074632 1676.341059362946 2108.010225266846 2009.151220243023 2276.7117595564005 1885.340352134862 1812.320418782195 1859.5548685184954 2232.940378923095 1850.2887943460976 2041.5830577739387 1.011511261915701 0.8210986337194441 1.0325370879425975 0.9841143678150043 1.1151697947762345 0.9234698264936438 0.8877034965005428 0.9108396846445622 1.093729873208198 0.9063010134711733 1.0 10.995472546617055 -8.761636073359966 24.999981919817202 1.0442613278423358 0.9607808569562398 0.0 0.08753173648068552 6.6754420930853495 848434.7421270227 0.013842633958319524 0.015200826742927 1.731266504492381e-09 8.761636073359966 -0.083480470886096 NRES(ph)YEVSLTQK ddPTM_A549_MK2206_60min_R1 1 NRESYEVSLTQK 12 1 D6RDK6;D6RBN5;Q9NX40 D6RDK6 OCIAD1 OCIA domain-containing protein 1 1 NRES(0.999)Y(0.001)EVSLTQK 76.391 0.00032366 4341700.0 910.51 1314.3 1545.7 1026.6 1392.2 1249.6 979.73 1041.1 1422.3 1496.9 1702.5 True False 1064.181828167755 1381.1922561708138 1764.903502516709 1278.1170460858257 1187.4092242361876 1381.8318425826515 1157.734259169467 1188.6791132350309 1100.151320946386 1158.749250357799 1279.7222633903712 0.8315724892903055 1.0792906364789012 1.3791301073726312 0.9987456518101883 0.9278647861375652 1.0797904218074328 0.9046761881771743 0.9288571022323707 0.8596797542864907 0.9054693221386348 1.0 10.321615022460179 -6.511003417961002 24.45509944588195 0.9414395288130618 1.1105954993370801 0.20950886010366554 0.1290481303726935 452.3240300951612 931478.2055345195 0.018178182035044423 0.04020802292736994 3.0831636852053637e-07 6.511003417961002 0.16915597052401832 NRGPS(ph)PEPLK ddPTM_A549_MK2206_60min_R1 2 NRGPSPEPLK 10 1 Q92674-2;Q92674 Q92674-2 CENPI Centromere protein I 1 NRGPS(1)PEPLK;NRGPS(1)PEPLK 59.898 0.0023081 35460000.0 3719.7 4148.1 4137.6 3692.9 5197.0 4240.3 3845.6000000000004 3862.5 5393.2 6161.4 6346.2 True False 4347.494422066312 4359.220572032378 4724.373896624917 4597.66066578058 4432.528184424272 4689.005731516663 4544.2957417473235 4410.021203410153 4171.64881117067 4769.535460721854 4770.263393790289 0.9113740821367813 0.9138322587610177 0.9903800915427208 0.9638169397030789 0.929199882378473 0.982965791285361 0.9526299423346056 0.9244816982540036 0.8745112097166651 0.9998474019129882 1.0 12.219853212616972 -5.572316731947351 24.997569146202636 0.9456279380291347 0.9119875457045321 0.11615286918596268 0.03747462125645363 205.45108850855559 103882.58171427104 0.00645945085490789 0.025017355341925885 2.6772151136308655e-06 5.572316731947351 -0.033640392324602586 NRGPS(ph)PEPLK ddPTM_A549_PD325901_60min_R1 2 NRGPSPEPLK 10 1 Q92674-2;Q92674 Q92674-2 CENPI Centromere protein I 1 NRGPS(1)PEPLK;NRGPS(1)PEPLK 107.65 7.2729e-05 72447000.0 5914.299999999999 5845.5 6300.799999999999 6919.4 7440.2 7787.0 7564.7 7273.0 7286.1 7253.4 7529.7 True False 6514.71538212246 6338.120799784031 6728.410177788364 7346.7956229024285 6917.6260192965765 7723.585253771624 7852.578798062677 7127.934309441875 6979.890555095272 6795.419086127013 6603.59463470098 0.9865407770320316 0.9597985870419845 1.0189011515684951 1.112544913689285 1.047554612596207 1.1696031753956015 1.1891370128624277 1.079402159542859 1.0569834978084374 1.0290484898055403 1.0 12.689035847000481 -5.98344184263083 5.531824785489898 1.0593020330520693 0.9756154465631647 0.3061927148905751 0.058178952592218364 0.21299196627425457 20.80801663014461 0.009725613847768554 0.03003052394710363 1.0388627095941202e-06 5.98344184263083 -0.08368658648890459 NRIS(ph)WVGEAVK ddPTM_A549_PD325901_60min_R1 1 NRISWVGEAVK 11 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 NRIS(1)WVGEAVK 54.09 0.0054621 3020800.0 1127.1 1254.8 1631.6 1445.0 1432.9 1313.3 1215.7 1312.1 1649.0 1144.3 1475.9 True False 1241.5223622728342 1360.546399720983 1742.3301876078422 1534.254368166894 1332.2580472366426 1302.604920223228 1261.9641287565662 1285.929136177463 1579.6982645519695 1072.04870271254 1294.3736565009476 0.9591684410736656 1.0511233698922138 1.3460797651876242 1.185325705959136 1.0292685118747757 1.0063592639427874 0.9749612273228788 0.9934759794584259 1.2204344986611777 0.8282374238136043 1.0 10.33803843565897 -5.371687292916249 4.763917756619348 1.098755501302336 0.9629673375900877 0.0 0.137163741843831 0.37747861760998197 12.293214550579298 0.017095005108585352 0.11234935585914128 4.249254148521239e-06 5.371687292916249 -0.13578816371224833 NRLS(ph)FQKQ ddPTM_A549_PD325901_60min_R1 1 NRLSFQKQ 8 2 Q7Z5W3 Q7Z5W3 BCDIN3D Pre-miRNA 5-monophosphate methyltransferase 1 NRLS(1)FQKQ 51.43600000000001 0.009591500000000001 4841500.0 1604.8 1327.7 1596.5 1653.3 1573.1 1488.8 1688.0 1874.9 1601.6 1674.0 1800.2 True False 1767.7181146086805 1439.5899385635557 1704.8480905343963 1755.420586083269 1462.6108829003854 1476.6757064100668 1752.237763709043 1837.5036486694028 1534.2903217140283 1568.303354313372 1578.786812408025 1.119668659958269 0.91183301459672 1.079846928752906 1.1118794331742836 0.9264144287280663 0.9353230561622095 1.1098634406734524 1.1638706595647155 0.9718160233260822 0.9933598013282976 1.0 10.624600658237433 NRPDYVS(ph)EEEEDDEDFETAVK ddPTM_A549_MK2206_60min_R1 2 NRPDYVSEEEEDDEDFETAVK 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDYVS(1)EEEEDDEDFETAVK;NRPDYVS(1)EEEEDDEDFETAVK 319.27 9.582199999999999e-185 431160000.0 27518.0 36296.0 40873.0 38732.0 60684.0 49540.0 46286.0 44804.0 67579.0 58847.0 51836.0 True False 32162.365649493437 38143.31136724938 46669.40600269484 48221.341738745556 51757.46398760869 54782.28991800944 54695.56706431155 51155.1042064954 52272.464401487654 45553.42182898354 38963.690599179594 0.8254445396445745 0.9789450326877535 1.1977665689522106 1.2375968753781472 1.3283511698118884 1.4059830851639838 1.4037573500664027 1.3128916542513687 1.34156861420587 1.1691249244737278 1.0 15.249842713975998 -5.607636797351562 2.315577704690926 1.2265529336040843 0.8255871044075611 0.588765490047705 0.1167715791140816 0.275009130316786 2.6107983110281174 0.02323443660899195 0.1650289875775391 2.4681025608940845e-06 5.607636797351562 -0.40096582919652324 NRPDYVS(ph)EEEEDDEDFETAVK ddPTM_A549_PD325901_60min_R1 3 NRPDYVSEEEEDDEDFETAVK 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDYVS(1)EEEEDDEDFETAVK;NRPDYVS(1)EEEEDDEDFETAVK;NRPDYVS(1)EEEEDDEDFETAVK 299.24 1.3951999999999997e-145 682526100.0 18663.7 20177.0 21327.2 21058.0 26263.6 24310.6 23024.0 25973.3 25396.0 24435.9 26395.6 True False 20558.425084510232 21877.38660118765 22774.592042872013 22358.704833812062 24418.93534050127 24112.622533753736 23900.190919216235 25455.24215584032 24328.694436968945 22893.013103743215 23149.108535494543 0.8880871180411974 0.9450638916674928 0.9838215587417424 0.9658559766795963 1.0548542421432645 1.041622077877506 1.032445412857694 1.0996208392565001 1.0509559968439277 0.9889371363325435 1.0 14.498669016396313 -5.662588307324899 0.8753105872239513 1.0334897719715161 0.8607277125503427 0.6861272429641215 0.0316779357800149 0.6287418506544559 0.5114408891453641 0.005230343985258803 0.0904628841879469 2.1747617835887212e-06 5.662588307324899 -0.1727620594211734 NRPDYVS(ph)EEEEDDEDFETAVKK ddPTM_A549_MK2206_60min_R1 4 NRPDYVSEEEEDDEDFETAVKK 22 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDYVS(1)EEEEDDEDFETAVKK;NRPDYVS(1)EEEEDDEDFETAVKK;NRPDYVS(1)EEEEDDEDFETAVKK;NRPDYVS(1)EEEEDDEDFETAVKK 295.01 9.567599999999997e-157 138458000.0 12919.099999999999 15981.9 18111.2 16212.900000000001 26506.0 18908.5 15712.600000000002 16399.4 27987.300000000003 24138.1 22723.699999999997 True False 15099.528238330213 16795.310445785846 20679.640496073393 20185.061227824746 22607.00251228587 20909.384919553515 18567.376032811262 18724.065171056158 21648.221236534326 18685.286445361486 17080.778147784877 0.8840070462649501 0.9832871957279036 1.2106966273521464 1.1817413148968539 1.3235346959422727 1.2241470932204077 1.087033381744331 1.0962068009462667 1.2674025181541146 1.0939364871842616 1.0 14.0600860807595 -5.597492295595848 4.287669317420333 1.1513731043640498 0.9032248926791745 0.5075264988929791 0.08903403385286586 0.15883941619554534 5.43339057874567 0.0158369355921238 0.07116266153617865 2.5264325287640092e-06 5.597492295595848 -0.24814821168487533 NRPDYVS(ph)EEEEDDEDFETAVKK ddPTM_A549_PD325901_60min_R1 3 NRPDYVSEEEEDDEDFETAVKK 22 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDYVS(1)EEEEDDEDFETAVKK;NRPDYVS(1)EEEEDDEDFETAVKK;NRPDYVS(1)EEEEDDEDFETAVKK 271.72 1.9230999999999994e-124 225762000.0 14053.1 14943.0 18281.9 17338.1 19646.600000000002 20770.9 19169.100000000002 20076.0 20307.2 18418.5 17386.6 True False 15479.760366654567 16202.299052463062 19522.61967199548 18409.03505931794 18266.69059309053 20601.74867696995 19898.590590234024 19675.568430682684 19453.75900419026 17255.55276667913 15248.158422738237 1.0151888469082904 1.062574155073179 1.2803263929159545 1.207295631967344 1.197960441298342 1.3510974968785985 1.3049832011556888 1.2903570310065928 1.2758103939411187 1.1316483137365259 1.0 13.896347393056814 -3.988028955409573 9.282438586302426 1.1733607504830261 1.1762771658669886 0.0 0.11885175918029382 0.0 0.0 0.019079748626728153 0.0 0.00010279477602059665 3.988028955409573 0.0029164153839624785 NRPEDYQGGR ddPTM_A549_MK2206_60min_R1 1 NRPEDYQGGR 10 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 89.805 0.00068242 9620700.0 1181.2 1491.6 1223.4 929.96 1227.2 1226.3 901.54 1141.7 1336.7 1997.5 1752.5 False True 1380.5576824326488 1567.5160688612848 1396.8965161279305 1157.800241747491 1046.6805056620103 1356.0662520479398 1065.338148277221 1303.5394713096098 1033.939584271274 1546.2633626759994 1317.3058834605724 1.0480160301158858 1.189940839513605 1.0604192493684708 0.8789152590026708 0.7945614749038946 1.0294239698417982 0.80872496027921 0.989549570586599 0.7848895212971394 1.1738073761683612 1.0 10.36337466845873 -6.148174162813716 4.040990029731065 0.8974618491900638 1.1198379203814042 0.2537698146903391 0.11868195974411092 0.1473170444925092 4.145353730563395 0.013271507904401722 0.03753214439561438 7.109283566496861e-07 6.148174162813716 0.2223760711913404 NRPEDYQGGR ddPTM_A549_PD325901_60min_R1 2 NRPEDYQGGR 10 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ; 112.94 0.00012214 20179100.0 4235.0 4136.1 4087.4 3704.1000000000004 4346.3 3753.8 3591.7 4009.9 3989.5 4231.299999999999 4901.4 False True 4664.934082357776 4484.663662644213 4364.795543532909 3932.893844378543 4041.0308819210113 3723.230297368423 3728.3841089536563 3929.9193987943036 3821.835188859963 3964.134995881824 4298.558872534547 1.085232102359739 1.0432946937865093 1.0154090412537042 0.9149331115382867 0.9400896909289763 0.8661578002706534 0.8673567629318754 0.9142411480983431 0.8890968583167282 0.9222009313890035 1.0 12.06963735007502 -6.004702073517273 2.1618862969791937 0.9301831621887313 1.0699286643114203 0.7012293846561638 0.038549112777607836 0.19983575387710412 1.803921559140246 0.007530892961673372 0.03033409138303251 9.892314758039648e-07 6.004702073517273 0.139745502122689 NRPEPHSDENGST(ph)TPK ddPTM_A549_MK2206_60min_R1 2 NRPEPHSDENGSTTPK 16 1 Q03701;C9J9W7 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 NRPEPHSDENGS(0.052)T(0.474)T(0.474)PK;NRPEPHSDENGS(0.093)T(0.454)T(0.454)PK 64.65 0.0017010000000000003 26218000.0 969.84 991.08 880.79 744.4200000000001 1039.91 751.09 1029.23 809.74 1355.88 1515.47 1430.47 True False 1133.5252816885209 1041.5217387550567 1005.6992663399701 926.8029334182836 886.9406165604468 830.5698452668089 1216.227768431089 924.5231247247476 1048.7753448954406 1173.1242744603742 1075.2448200364315 1.0542020389831914 0.9686368344650735 0.9353211916016437 0.8619459644426667 0.8248731823980285 0.7724471950849924 1.1311170681946467 0.8598256950388498 0.9753828387286776 1.091029924162412 1.0 10.070449465816072 -8.877307463577202 0.9169316329799012 0.9940973687215783 0.9187489036677389 0.12873672362532906 0.10157774148991185 0.9162192405452747 1.5746517810277902 0.023345378988942154 0.02294226517108407 1.3264550467287766e-09 8.877307463577202 -0.07534846505383941 NRPEPHSDENGST(ph)TPK ddPTM_A549_PD325901_60min_R1 3 NRPEPHSDENGSTTPK 16 1 Q03701;C9J9W7 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 NRPEPHSDENGS(0.027)T(0.487)T(0.487)PK;NRPEPHSDENGS(0.005)T(0.589)T(0.406)PK;NRPEPHSDENGS(0.105)T(0.789)T(0.105)PK 115.15 7.1019e-08 40374200.0 3033.1 2593.04 2943.64 2722.41 4371.719999999999 4091.4000000000005 3742.4999999999995 4118.12 3684.42 3743.1 3518.45 True False 3341.018079149796 2811.5645810746723 3143.413111945298 2890.567082658291 4064.6654688152503 4058.0809948993447 3884.9228854745825 4035.9808659973587 3529.576640315683 3506.760027198557 3085.7029552922018 1.0827413161787691 0.9111585339906544 1.0187024342554163 0.9367612905515618 1.3172575350598987 1.3151236699370057 1.2590074099036854 1.3079615648276715 1.1438484816765029 1.1364541817559632 1.0 11.591383472444647 -6.7133279105970995 24.999902623758494 1.1359508025767808 0.9841392738725696 0.3746101126132074 0.11549853031941144 152.02460163640652 78994.85089446293 0.020727139232548892 0.043146900593275334 1.934960435759079e-07 6.7133279105970995 -0.15181152870421122 NRPEPHSDENGSTT(ph)PK ddPTM_A549_MK2206_60min_R1 2 NRPEPHSDENGSTTPK 16 1 Q03701;C9J9W7 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 NRPEPHSDENGS(0.039)T(0.194)T(0.767)PK;NRPEPHSDENGS(0.017)T(0.049)T(0.934)PK 60.062 0.0017055999999999998 8447000.0 252.73 495.69 393.13 524.45 766.72 631.7 658.65 731.27 762.12 866.97 783.01 True False 295.38464534473707 520.9185037368263 448.8817454515066 652.9402735434551 653.9365036678422 698.5460747114765 778.3181792963061 834.929761920451 589.5010368555576 671.1208748631848 588.5670070233743 0.5018708861011745 0.8850623591208853 0.7626688891748901 1.1093728764132444 1.1110655131266503 1.1868590430243646 1.3223951903668225 1.418580640703995 1.0015869558113817 1.1402624796407113 1.0 9.201062861958151 -5.397777523583903 1.025010171494314 1.0790016159357576 0.3442480173005499 0.6055275829936573 0.15362710879521196 1.009355696673729 0.9524392545245013 0.026526330783550423 0.7650975723753791 4.0014968229571145e-06 5.397777523583903 -0.7347535986352077 NRPEPHSDENGSTT(ph)PK ddPTM_A549_PD325901_60min_R1 1 NRPEPHSDENGSTTPK 16 1 Q03701;C9J9W7 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 NRPEPHSDENGS(0.063)T(0.389)T(0.548)PK 80.975 0.00010469 7376300.0 753.85 536.19 614.59 670.09 788.93 817.22 702.56 519.83 758.85 857.62 592.32 True False 830.3802970449608 581.3766130589688 656.2997732298993 711.4799374151927 733.5182784607467 810.5648312684272 729.2963052555833 509.46158285125404 726.9581734719595 803.469726837655 519.4683950258428 1.5985193805749252 1.1191761012333505 1.263406550839824 1.3696308461264473 1.4120556428158737 1.560373718651551 1.4039281547038138 0.9807364369605374 1.399427145968706 1.546715323841181 1.0 9.020892166572125 -11.363707284822313 0.4764071794078085 0.8198881058843037 1.3549720648393762 0.0 0.23508908833187775 2.3962605748820645 0.48600284851394615 0.6618633253951491 0.03989476001551502 4.328054443140227e-12 11.363707284822313 0.5350839589550724 NRPGS(ph)ALEK ddPTM_A549_MK2206_60min_R1 2 NRPGSALEK 9 1 P31930 P31930 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial 1 NRPGS(1)ALEK;NRPGS(1)ALEK 60.301 0.0022719000000000003 15295300.0 3278.4 4028.2000000000003 3986.3 3754.4 5726.0 5231.5 4493.1 5265.5 6519.3 5582.5 5269.5 True False 3831.7137708154396 4233.218174166685 4551.61728154387 4674.228168541422 4883.712985186334 5785.09385761135 5309.438110371569 6011.900749917448 5042.688959182855 4321.409372785369 3960.9377191985677 0.9673754152314027 1.0687414128347386 1.149126192891722 1.1800812080143428 1.2329688905521279 1.4605364354938333 1.340449784059177 1.5177973439920331 1.2731048344287428 1.0910066451788938 1.0 11.951626301504273 -5.5962366113022615 1.4734625554087684 1.2082612688897527 0.9452974144677971 0.2525026730774431 0.1476105337874294 1.0214731061753937 3.070966513776461 0.026950888882058245 0.3258188062208937 2.533747823834259e-06 5.5962366113022615 -0.2629638544219556 NRPLS(ph)DEELDAMFPEGYK ddPTM_A549_MK2206_60min_R1 3 NRPLSDEELDAMFPEGYK 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK 122.77 5.6816e-11 2533000.0 1690.73 1876.76 1413.02 1582.96 2592.4700000000003 2005.61 1790.23 1652.3000000000002 2594.41 2420.38 2504.92 True False 1976.0838896201763 1972.279067709913 1613.4074834225007 1970.7852710617756 2211.121097224244 2217.842318983829 2115.491617887537 1886.51858495653 2006.78027742144 1873.6144769730856 1882.879231724996 1.0495011343928793 1.0474803877373555 0.8568831480202693 1.0466870300843696 1.174329749868519 1.1778994008829538 1.1235407891505784 1.0019328659906668 1.0658040322548632 0.9950794747768169 1.0 10.878724752814463 -5.534798018819035 24.961672305502805 1.044468488039903 1.04899622011834 0.0 0.08675714638544534 5865.653212684837 12283968.311954528 0.012454834757945798 0.04823751166622604 2.918784163186574e-06 5.534798018819035 0.00452773207843693 NRPLS(ph)DEELDAMFPEGYK ddPTM_A549_PD325901_60min_R1 2 NRPLSDEELDAMFPEGYK 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK 83.039 4.6537e-05 4381000.0 1748.88 1275.25 1826.0900000000001 1850.9499999999998 1710.13 1967.38 1413.5300000000002 1632.48 2060.06 1911.96 1791.91 True False 1926.4250101425912 1382.7197929902638 1950.019448571222 1965.27897768755 1590.0163684282215 1951.3583095627607 1467.3226576632965 1599.9189057442156 1973.4828422516246 1791.2385193028647 1571.516429853385 1.2258382881318761 0.879863402458519 1.2408520913479406 1.250562157896689 1.0117720300108872 1.2417040461643873 0.9336985791489247 1.0180732923635296 1.2557825071136808 1.1398153307693886 1.0 10.617941639932123 -6.789402366933907 24.994747834381858 1.1041020541281557 1.1365762977614622 0.0356074966520743 0.1337407718406972 1236.198203497823 1104975.9231979316 0.020956203168473197 0.039608863629003316 1.6240434081161267e-07 6.789402366933907 0.03247424363330653 NRPLS(ph)VVVTGK ddPTM_A549_MK2206_60min_R1 2 NRPLSVVVTGK 11 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 NRPLS(1)VVVTGK;NRPLS(1)VVVTGK 78.615 0.00028909 15753800.0 1910.8899999999999 2518.1000000000004 3150.6 2824.1000000000004 4119.200000000001 2868.0 2894.6 3328.2 4183.2 3328.7 3183.2 True False 2233.4015152249635 2646.26053432529 3597.4024552171486 3516.0046267786684 3513.2711366712433 3171.489856375676 3420.511351690709 3799.9825421850273 3235.711879197724 2576.7443581174484 2392.723588149328 0.9334139247368756 1.1059616528343177 1.5034759857069782 1.4694570840496255 1.468314666212077 1.325472725760476 1.4295472191739171 1.588141046047093 1.3523132781502825 1.076908494938378 1.0 11.224438028367121 -10.440378430624317 0.9078320497979522 1.0117560101030343 1.3614677065965213 0.3070783440702892 0.17980789398987818 0.49574488466292466 0.7691392533102638 0.10447860198921945 0.035105491719960594 3.627618177118798e-11 10.440378430624317 0.349711696493487 NRPLS(ph)VVVTGK ddPTM_A549_PD325901_60min_R1 1 NRPLSVVVTGK 11 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 NRPLS(0.999)VVVT(0.001)GK 69.26100000000001 0.0010206 12262000.0 2457.5 2433.7 2803.5 3050.4 2872.7 2728.0 2757.5 2721.9 2362.7 2628.0 2913.5 True False 2706.983590884117 2638.7964400708915 2993.762368815021 3238.816280038957 2670.931462276992 2705.7840724655184 2862.438171461897 2667.6095692107597 2263.4039355105742 2462.0676315027144 2555.1579701981914 1.0594192697503353 1.0327331894341596 1.1716545136279026 1.2675600952326784 1.0453097199582617 1.0589498199423042 1.1202587882423063 1.0440096464970603 0.8858176135916218 0.9635676777008599 1.0 11.319196771823597 -8.552571392569014 4.751858624321942 0.9462656496782663 1.1081201332391784 0.5075077832143007 0.06811345520676461 0.12398077643391733 6.888813456998702 0.013037754207617757 0.015011115548285079 2.801745012047998e-09 8.552571392569014 0.16185448356091203 NRPT(ph)SISWDGLDSGK ddPTM_A549_MK2206_60min_R1 4 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.488)S(0.488)IS(0.023)WDGLDSGK;NRPT(0.488)S(0.488)IS(0.025)WDGLDSGK;NRPT(0.862)S(0.138)ISWDGLDSGK;NRPT(0.5)S(0.5)ISWDGLDSGK 126.77 1.2921e-07 25523400.0 5987.7 7528.2 7159.200000000001 5522.32 12298.599999999999 9421.300000000001 8297.1 8550.8 11798.1 10854.4 10942.5 True False 6998.277374790021 7911.35322445798 8174.482212083599 6875.288647906362 10489.4922318569 10418.255712647202 9804.575670598007 9762.902085726737 9125.849187694264 8402.383501291803 8225.175252363659 0.8508362630667273 0.9618461591057897 0.9938368437480415 0.8358835449652722 1.2752910315002162 1.2666302410581853 1.1920202755291418 1.1869536862355832 1.1095020966357867 1.02154461680038 1.0 13.005830703087154 -6.743376920138821 24.999910491740454 1.1034486272294262 0.920206534466123 0.5483249312049436 0.09885738750353001 212.7864196618594 294512.08797056274 0.016686663464119525 0.03468094719237022 1.805606376822388e-07 6.743376920138821 -0.18324209276330317 NRPT(ph)SISWDGLDSGK ddPTM_A549_PD325901_60min_R1 1 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.495)S(0.495)IS(0.011)WDGLDSGK 75.334 0.00026849 101360000.0 2265.3 2136.7 2577.0 2438.4 2211.8 2919.3 2257.5 1901.9 3161.3 2227.8 2642.0 True False 2495.2715883742817 2316.7672077493025 2751.8907167598727 2589.0144299918015 2056.4507982957666 2895.5261886908297 2343.4103978514013 1863.965112488313 3028.441554716881 2087.1363278012736 2317.05074901789 1.0769171065553624 0.999877628373609 1.1876695915815805 1.1173749349638484 0.8875294592349425 1.2496602372296477 1.0113763795828312 0.8044558856893302 1.3070242660850317 0.9007728159108864 1.0 11.178073927723103 NRPTS(ph)ISWDGLDSGK ddPTM_A549_MK2206_60min_R1 2 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.233)S(0.766)IS(0.002)WDGLDSGK;NRPT(0.375)S(0.624)IS(0.001)WDGLDSGK 175.16 5.144999999999999e-28 114933000.0 10778.5 15214.1 10823.4 9928.4 27172.0 20999.3 17685.3 20350.0 25463.0 21745.0 21150.0 True False 12597.647290975543 15988.432705324805 12358.320870246063 12360.858445702816 23175.034794530744 23221.431987792803 20898.490087768863 23234.674819261236 19695.671156055567 16832.789397441615 15897.871289695362 0.7924109499578759 1.005696449164747 0.7773569583656427 0.7775165756760681 1.4577445226614882 1.4606629758566738 1.3145464387622001 1.4614959698611614 1.2388873200163504 1.0588077542401695 1.0 13.95654598245542 -6.741571201728116 24.998791845621703 1.2042313015975394 0.8458567715931903 0.5981190668444216 0.16793077127545386 189.181594074448 238033.21214973545 0.02919086939147885 0.060701992559461675 1.813129392495858e-07 6.741571201728116 -0.35837453000434916 NRPTS(ph)ISWDGLDSGK ddPTM_A549_PD325901_60min_R1 1 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.265)S(0.731)IS(0.004)WDGLDSGK 112.68 4.6203e-07 86083000.0 3616.5 3425.3 3206.9 4059.5 3161.0 4115.8 3324.2 3707.7 4509.4 3940.8 5161.2 True False 3983.644417673415 3713.9620520913945 3424.539518656283 4310.246095206577 2938.9822648579975 4082.282289389142 3450.704250072039 3633.7470148656184 4319.885599860913 3691.977215458867 4526.405119542443 0.8800901184196492 0.8205103065248444 0.7565693808252092 0.9522448789652932 0.6492972209158089 0.9018817762829423 0.762349846940094 0.8027887294438506 0.9543744949408316 0.8156532873116039 1.0 12.144149998254719 -8.826949996469098 4.239058073325356 0.9803308883512978 0.8137584951452219 0.1472277549845875 0.09156558285144577 0.12001740021246154 4.165884999756594 0.012342724154781147 0.013158708829870943 1.489532568722826e-09 8.826949996469098 -0.16657239320607586 NRRT(ph)VASIK ddPTM_A549_MK2206_60min_R1 1 NRRTVASIK 9 2 O00139-1;O00139-5;O00139;O00139-4;O00139-2;D6R9M0;D6RD93 O00139-1 KIF2A Kinesin-like protein KIF2A 1 NRRT(0.998)VAS(0.002)IK 43.544 0.023014 3265500.0 557.18 634.1 783.88 570.55 684.03 942.21 764.9 502.63 932.04 970.61 884.76 True False 651.2183622568775 666.3729815399172 895.0459711152217 710.3347756129627 583.4100931290619 1041.91403681162 903.8724289740289 573.8793417398176 720.9344281620397 751.3485268820787 665.0496738662349 0.9792025886894287 1.0019897877191477 1.3458332607125634 1.0680928109978087 0.8772428828322475 1.566670998806002 1.3591051382965262 0.8629119963379535 1.0840309475996304 1.1297630183233522 1.0 9.37731829213899 -8.267089556215236 24.986955289582987 1.0275323314714728 1.1713170044234833 0.12071913249557753 0.19684804651823776 833.8740366636083 3687659.4628237216 0.032040389416217584 0.03927508300933669 5.406428250571267e-09 8.267089556215236 0.14378467295201047 NRRT(ph)VASIK ddPTM_A549_PD325901_60min_R1 2 NRRTVASIK 9 2 O00139-1;O00139-5;O00139;O00139-4;O00139-2;D6R9M0;D6RD93 O00139-1 KIF2A Kinesin-like protein KIF2A 1 NRRT(0.998)VAS(0.002)IK;NRRT(1)VASIK 91.93700000000001 0.00035206 7686600.0 1397.5900000000001 1630.3 1727.27 1220.85 1879.38 1883.92 1492.76 1607.57 1603.5 1520.85 1769.27 True False 1539.4723079486203 1767.691102538348 1844.4929291182873 1296.2591317484794 1747.3788323090241 1868.577980131685 1549.567798669616 1575.505755235731 1536.1104713214575 1424.823271450115 1551.6610063266014 0.992144741455586 1.1392250596818023 1.1887215839011998 0.835400984147459 1.1261343973873292 1.2042436927350209 0.9986509890701314 1.0153672411769756 0.989978136370161 0.9182568007062563 1.0 10.599597688893999 -7.931276903159951 24.99999999997624 0.9971334921909516 1.0812497085352286 0.1869187669175384 0.09864915478271064 72.2184580183829 26270.550843547273 0.014396044129698495 0.01989099253261237 1.1714482200976118e-08 7.931276903159951 0.08411621634427702 NRS(ph)ADFNPDFVFTEK ddPTM_A549_MK2206_60min_R1 1 NRSADFNPDFVFTEK 15 1 Q96GQ7;B7Z6D5;A0A087WYH5 Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 1 NRS(1)ADFNPDFVFTEK 69.737 0.00059454 945100.0 513.06 569.43 724.92 720.57 979.51 643.26 625.01 575.02 950.45 784.54 740.65 True False 599.6519848873139 598.4115547678208 827.7245565403456 897.1096823476169 835.4253765490511 711.3293462385699 738.5662267395184 656.5308459248943 735.1745925567692 607.3118691133062 556.7261640998993 1.0771040119100852 1.0748759324708896 1.4867714325562364 1.6114020504102604 1.5006037625333195 1.2777005862273945 1.3266238850721404 1.1792706868489946 1.320531780189244 1.090862812411902 1.0 9.120824075978613 -10.725122623094842 0.5028984746927117 0.9304985783045698 1.3387836620390638 0.2910725378100517 0.16275030227168413 1.475120460669871 0.496593520416588 0.2948062354159439 0.04272671578884485 1.8831173160384078e-11 10.725122623094842 0.408285083734494 NRS(ph)ADFNPDFVFTEK ddPTM_A549_PD325901_60min_R1 1 NRSADFNPDFVFTEK 15 1 Q96GQ7;B7Z6D5;A0A087WYH5 Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 1 NRS(1)ADFNPDFVFTEK 85.146 3.6906e-05 1931100.0 443.19 879.33 676.67 488.76 891.34 875.68 838.49 825.24 962.96 642.15 677.41 True False 488.1823225407657 953.4342251089029 722.5928953472657 518.949595145502 828.7353533560677 868.5487524107781 870.3991957893337 808.779940811744 922.4901399836046 601.6045394099954 594.0928644557944 0.8217272950887137 1.6048572237646301 1.216296203135146 0.8735159538077845 1.3949592781512572 1.4619747254604598 1.465089463053295 1.36136955886957 1.5527709473983184 1.012643940709643 1.0 9.214544650461166 -5.231582451250834 22.85505532858677 1.2946448218054794 0.8217248905233856 0.25791720699113774 0.23046491472883732 4094.892427118759 3134419.3790197154 0.03469009169528834 4.550300778241343 5.867019730760814e-06 5.231582451250834 -0.47291993128209375 NRS(ph)AEEGELAESK ddPTM_A549_MK2206_60min_R1 8 NRSAEEGELAESK 13 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK 306.15 2.5146999999999988e-135 1098439000.0 40856.0 47712.59999999999 46502.9 41287.899999999994 54643.79999999999 41397.1 37886.5 37652.92 56873.6 52788.399999999994 51163.2 True False 47751.49396670191 50140.96754300816 53097.71047886671 51403.437353484274 46605.76940620413 45777.713644829 44769.9866392006 42990.33671723135 43991.82040847668 40863.463776863944 38457.96540751498 1.241654192069425 1.303786277087093 1.3806687357540504 1.336613541792818 1.2118625858740046 1.190331135819361 1.1641277993986703 1.1178526024892288 1.1438935976545535 1.0625487683464114 1.0 15.230994819446918 -8.2102204255602 0.2689268030234925 0.9835391668437162 1.3727138875807956 0.8061493691700548 0.04858085232548822 0.5415634930755083 0.12085095886761793 0.05239386861162086 0.07554347159504664 6.162821293316767e-09 8.2102204255602 0.38917472073707937 NRS(ph)AEEGELAESK ddPTM_A549_PD325901_60min_R1 8 NRSAEEGELAESK 13 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK 290.84 3.542299999999999e-116 944437600.0 50005.53999999999 49138.64 52060.770000000004 53949.83 63166.9 60349.1 64489.46 67771.0 72637.0 75743.9 77730.7 True False 55082.06560866709 53279.7256448721 55593.92691904187 57282.18847014625 58730.274857974946 59857.63693828035 66943.64169028657 66419.25423967885 69584.31949197163 70961.41722746522 68170.31667550531 0.80800659722414 0.7815678178302546 0.8155151630536236 0.8402805101054879 0.8615226937779163 0.878060127301538 0.9820057314526236 0.9743134179035485 1.0207422069519945 1.040943048060723 1.0 16.0568560644427 -7.50727654347857 0.9272991992690374 1.0107289380058 0.8015762051125078 0.9557762192209691 0.019114868031433915 0.06634509589066169 0.11415399312136006 0.0031240989109289747 0.0063376179082074375 3.1097355361099987e-08 7.50727654347857 -0.20915273289329217 NRS(ph)DTEQEGK ddPTM_A549_MK2206_60min_R1 4 NRSDTEQEGK 10 1 Q13769;F8WES8;C9JXU6;F5GZF3;C9JCL9;C9JXG5;F8WCP5 Q13769 THOC5 THO complex subunit 5 homolog 1 NRS(0.918)DT(0.082)EQEGK;NRS(0.961)DT(0.039)EQEGK;NRS(0.873)DT(0.127)EQEGK;NRS(0.702)DT(0.298)EQEGK 100.22 0.00012747 36281900.0 7054.1 5737.15 4544.49 3215.7200000000003 1483.77 942.5 1202.69 1182.06 1120.904 9437.7 8914.4 True False 8244.659623813199 6029.146429651058 5188.967016983996 4003.5715443591585 1265.5093985382334 1042.2347244191344 1421.2032051284816 1349.6206249069255 867.0210337158742 7305.717015232681 6700.70845507614 1.2304161088470331 0.8997774593645633 0.7743908053562724 0.5974848139119143 0.18886202959323553 0.15554097472030537 0.2120974542702041 0.20141461667154265 0.12939244253479795 1.0902902378476436 1.0 12.710097922111819 -3.8822249807091604 15.581545386334248 0.5461577270737186 0.9001117027820686 0.0 0.40836851639658917 0.0 0.0 0.058633586371852134 0.0 0.00013115203066643504 3.8822249807091604 0.3539539757083501 NRS(ph)DTEQEGK ddPTM_A549_PD325901_60min_R1 3 NRSDTEQEGK 10 1 Q13769;F8WES8;C9JXU6;F5GZF3;C9JCL9;C9JXG5;F8WCP5 Q13769 THOC5 THO complex subunit 5 homolog 1 NRS(0.994)DT(0.006)EQEGK;NRS(0.979)DT(0.021)EQEGK;NRS(0.941)DT(0.059)EQEGK 127.27 4.4418999999999996e-07 65906000.0 11673.8 11879.5 11167.8 9348.5 11794.0 8290.61 8041.75 9434.7 10910.3 12876.4 14747.400000000001 True False 12858.915582202648 12880.627156108872 11925.714065436916 9925.935613016061 10965.630127091183 8223.094020902987 8347.78319686445 9246.517507121036 10451.778032590264 12063.381906499835 12933.563291471011 0.9942283725230162 0.9959070726164809 0.9220748989801815 0.7674556028624905 0.8478429246426177 0.6357949341250508 0.6454356783771541 0.714924209109381 0.8081127990058741 0.9327191304236309 1.0 13.658832182517667 -5.98639125928468 4.244422611398933 0.8431388039097957 0.9915075442884085 0.2736441539693535 0.11216037375755361 0.2988332861382174 12.863248233891602 0.020002663078556564 0.06352815462968732 1.0318314019458718e-06 5.98639125928468 0.1483687403786128 NRS(ph)NTPILVDGK ddPTM_A549_MK2206_60min_R1 2 NRSNTPILVDGK 12 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4 P06744-2 GPI Glucose-6-phosphate isomerase 1 NRS(0.715)NT(0.285)PILVDGK;NRS(0.751)NT(0.249)PILVDGK 101.9 6.1221e-05 14367900.0 3016.5 3201.3 3320.8 3097.4 4035.0 3709.6000000000004 3377.1 3743.4 4392.3 4210.4 4474.7 True False 3525.6114536556775 3364.2324961421496 3791.739374495367 3856.2631390475717 3441.4568451321793 4102.147409766811 3990.6753561095493 4274.0384136817 3397.45106306181 3259.267715750201 3363.50849456264 1.0481946037463823 1.000215251895656 1.1273167231850296 1.1465001932599563 1.0231747149429082 1.2196037014320715 1.1864621012733492 1.270708375076501 1.0100914175046802 0.9690083200381531 1.0 11.71575118637169 -8.947421501809892 24.999815357562493 1.0044517045381314 1.1265813647323537 0.36764974823054875 0.07832950132084122 82.97297472178869 39451.6685412695 0.013941225398231333 0.014840394800541654 1.1286999302069665e-09 8.947421501809892 0.12212966019422233 NRS(ph)NTPILVDGK ddPTM_A549_PD325901_60min_R1 2 NRSNTPILVDGK 12 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4 P06744-2 GPI Glucose-6-phosphate isomerase 1 NRS(0.935)NT(0.065)PILVDGK;NRS(0.823)NT(0.177)PILVDGK 98.06200000000001 7.030199999999999e-05 23516000.0 3188.5 3681.0 3643.1000000000004 3759.2 4338.5 3734.2 3367.6 4237.8 4229.0 3904.8 4381.3 True False 3512.194172750361 3991.2107884706243 3890.3426737399705 3991.3972462373595 4033.7787270124754 3703.7899132700654 3495.7558608214295 4153.273754510215 4051.269836743648 3658.2502616026636 3842.42787534901 0.9140559788467978 1.038721068540057 1.012469927854302 1.0387695945691158 1.0497994647839903 0.9639191764747563 0.9097778733202397 1.0808982990039784 1.0543515631703742 0.9520673855902585 1.0 11.907802464590397 NRS(ph)SDGGSEEPPDRR ddPTM_A549_PD325901_60min_R1 3 NRSSDGGSEEPPDRR 15 2 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 NRS(0.488)S(0.488)DGGS(0.024)EEPPDRR;NRS(0.484)S(0.484)DGGS(0.031)EEPPDRR;NRS(0.497)S(0.497)DGGS(0.006)EEPPDRR 50.787 0.0074465 10227900.0 479.76 588.76 473.33 648.7400000000001 591.77 408.62 772.822 661.3199999999999 803.8599999999999 1103.17 1545.3100000000002 True False 528.4648820193546 638.3768714533995 505.45302016451376 688.8111964045609 550.2061166956715 405.2923341975294 802.2321641144252 648.1294538044962 770.0765596984511 1033.51565793183 1355.2466665271897 0.38993999769321863 0.4710410932714086 0.3729601648530401 0.5082552227703573 0.40598226897364076 0.2990542933679285 0.5919454988737509 0.4782372610185594 0.5682187447630969 0.7626033573505897 1.0 10.404339743022312 -10.28971043237204 0.4154111617098494 1.101004193428898 0.4061343561335195 0.743448928329077 0.0965747430822535 0.3297675108822104 0.09186416666040453 0.09632409572542618 0.021309795819751707 5.132034504481302e-11 10.28971043237204 -0.6948698372953785 NRS(ph)YIDRDSEYLLQENEPDGTLDQK ddPTM_A549_MK2206_60min_R1 3 NRSYIDRDSEYLLQENEPDGTLDQK 25 2 Q9H2U1-3;Q9H2U1-2;Q9H2U1;E7EWK3 Q9H2U1-3 DHX36 ATP-dependent RNA helicase DHX36 1 NRS(0.952)YIDRDS(0.048)EYLLQENEPDGTLDQK;NRS(0.977)YIDRDS(0.023)EYLLQENEPDGTLDQK;NRS(0.506)Y(0.001)IDRDS(0.487)EY(0.006)LLQENEPDGTLDQK 177.55 6.167399999999999e-49 52226400.0 4656.97 6240.7 5657.8 4594.0 6292.9 4801.4 4606.700000000001 4352.9 6790.8 6553.500000000001 7003.1 True False 5442.952684014881 6558.324973815112 6460.161115701 5719.5302062325 5367.222746154224 5309.480961088622 5443.677759909349 4969.936905197165 5252.694642679264 5073.05979839658 5264.036994272601 1.0339883040215987 1.245873648105195 1.227225629821715 1.0865292573846814 1.019602018753647 1.008632911749189 1.0341260454347494 0.944130314928367 0.9978453130922754 0.9637203925269126 1.0 12.36195391265357 -6.584907500493173 2.808595166408122 0.9989138614929151 1.1759647340765431 0.6523341311178092 0.05568645024221475 0.10891690687457568 1.7348613167231448 0.007286112384925203 0.01703232763645018 2.6007134248935356e-07 6.584907500493173 0.17705087258362806 NRSDT(ph)EQEGK ddPTM_A549_PD325901_60min_R1 1 NRSDTEQEGK 10 1 Q13769;F8WES8;C9JXU6;F5GZF3;C9JCL9;C9JXG5;F8WCP5 Q13769 THOC5 THO complex subunit 5 homolog 1 NRS(0.243)DT(0.757)EQEGK 91.93700000000001 0.0024229 3790300.0 1023.5 1386.6 1341.1 1095.3 1109.2 1020.0 1135.2 1119.4 1440.0 1311.2 1516.3 True False 1127.404966539123 1503.4536482731226 1432.1151106894317 1162.9541933932164 1031.293618532266 1011.6934581799227 1178.4006572052751 1097.0726888476886 1379.48180773489 1228.4106082292083 1329.8047126176468 0.8477973914830613 1.1305822832539505 1.0769364081064148 0.8745300587061431 0.7755226077536015 0.7607834808980788 0.8861456468188166 0.8249878184655864 1.037356684516072 0.9237526356867469 1.0 10.37699868014463 -8.779870485981279 24.974150896859467 1.0176406691367703 0.9012119134018478 0.09608669743932408 0.11205714737130282 314.9941749953321 426815.42873927474 0.020625109757550216 0.021976554907627097 1.6600818983510875e-09 8.779870485981279 -0.1164287557349225 NRSSDGGS(ph)EEPPDRR ddPTM_A549_MK2206_60min_R1 1 NRSSDGGSEEPPDRR 15 2 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 NRS(0.079)S(0.109)DGGS(0.813)EEPPDRR 83.25299999999999 7.802199999999999e-05 6261700.0 919.12 753.03 522.56 869.14 768.29 515.75 634.65 770.12 544.84 1031.4 1266.3 True False 1074.2449856734647 791.3560105488151 596.6668656758306 1082.0793390171777 655.2755587476088 570.3263226728576 749.9576899573378 879.2868683935856 421.43460993069584 798.4060236615899 951.8427618979301 1.1285950040019954 0.8313936316234501 0.6268544444106553 1.1368257261940637 0.688428367560436 0.5991812361273342 0.7879008172126635 0.9237732360755977 0.442756542152377 0.838800330917688 1.0 9.894579459352228 NRSYIDRDS(ph)EYLLQENEPDGTLDQK ddPTM_A549_MK2206_60min_R1 1 NRSYIDRDSEYLLQENEPDGTLDQK 25 2 Q9H2U1-3;Q9H2U1-2;Q9H2U1;E7EWK3 Q9H2U1-3 DHX36 ATP-dependent RNA helicase DHX36 1 NRS(0.391)Y(0.027)IDRDS(0.554)EY(0.027)LLQENEPDGT(0.001)LDQK 48.305 0.0033373000000000005 6490100.0 1109.3 1105.9 920.22 957.91 1361.6 1293.4 759.45 981.07 1381.5 1301.5 1524.6 True False 1296.5227202188769 1162.1855863191836 1050.721033244437 1192.597993002214 1161.3104437006127 1430.266729510565 897.4322345199716 1120.139676900867 1068.5924558021743 1007.4902460689934 1145.999743180593 1.1313464317369952 1.014123775537391 0.9168597458218265 1.0406616581713124 1.0133601256118319 1.248051527080644 0.783099856575229 0.9774344920811637 0.9324543588783157 0.879136537389457 1.0 10.162391005447894 -7.771610975897393 24.999990905850296 0.9555276640443928 1.0490097955529216 0.318714292930975 0.09768935299304803 265.0475006396178 651439.395057446 0.014508865534008408 0.020167707308904714 1.691955841268056e-08 7.771610975897393 0.0934821315085288 NRSYIDRDS(ph)EYLLQENEPDGTLDQK ddPTM_A549_PD325901_60min_R1 1 NRSYIDRDSEYLLQENEPDGTLDQK 25 2 Q9H2U1-3;Q9H2U1-2;Q9H2U1;E7EWK3 Q9H2U1-3 DHX36 ATP-dependent RNA helicase DHX36 1 NRS(0.198)YIDRDS(0.802)EYLLQENEPDGTLDQK 198.06 1.4452999999999997e-68 30094000.0 3317.0 3207.9 3897.2 3463.7 3803.7 3608.8 3319.2 4113.7 4619.0 4986.3 5277.3 True False 3653.7393981536584 3478.2409911260274 4161.687427767396 3677.6448823665532 3536.5412340526336 3579.4111292938287 3445.5139723359307 4031.6490263647793 4424.879493005182 4671.46416703272 4628.225555560978 0.7894471335269216 0.751527977487354 0.8991971929213736 0.7946122846039194 0.7641246502784103 0.7733873568441448 0.7444567968810472 0.8711003770161134 0.9560639255553419 1.0093423734329001 1.0 12.176243460248328 -8.643967014750476 2.396123204366169 0.9815496691675878 0.7897883661178655 0.8215343867325472 0.04084295882955869 0.08514990501563999 0.9730963686815278 0.0074518091083788165 0.008393305625868434 2.2700372577168065e-09 8.643967014750476 -0.19176130304972228 NRT(ph)LPDLSEVGPFHGQPLGPGLRPGEDPK ddPTM_A549_MK2206_60min_R1 2 NRTLPDLSEVGPFHGQPLGPGLRPGEDPK 29 2 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NRT(0.975)LPDLS(0.025)EVGPFHGQPLGPGLRPGEDPK;NRT(0.99)LPDLS(0.01)EVGPFHGQPLGPGLRPGEDPK 67.571 0.00028627 6287100.0 754.76 665.61 480.70000000000005 693.03 875.52 744.6500000000001 513.72 1062.8799999999999 1288.8400000000001 1291.8 1234.84 True False 882.14503588966 699.4867059498253 548.8704882317282 862.8223811112987 746.7321677943313 823.4483687413353 607.0562743006124 1213.546494933484 996.9197978545598 999.981482805936 928.1951481497595 0.950387467170137 0.7535987527452219 0.59133091713077 0.9295700185798502 0.8044991069850431 0.8871500463914042 0.6540179352485335 1.3074260271156735 1.0740411645566068 1.077339700384422 1.0 9.8582843460648 -8.245865878695382 24.9994189044745 1.0563754833131898 0.7953004487241283 0.5755738764826059 0.12822594689919983 510.52687636372855 819525.9565026218 0.02006086779253728 0.025849626593754168 5.677199048451469e-09 8.245865878695382 -0.26107503458906145 NRT(ph)LPDLSEVGPFHGQPLGPGLRPGEDPK ddPTM_A549_PD325901_60min_R1 3 NRTLPDLSEVGPFHGQPLGPGLRPGEDPK 29 2 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NRT(0.999)LPDLS(0.001)EVGPFHGQPLGPGLRPGEDPK;NRT(0.968)LPDLS(0.032)EVGPFHGQPLGPGLRPGEDPK;NRT(0.999)LPDLS(0.001)EVGPFHGQPLGPGLRPGEDPK 96.95700000000001 5.6667e-10 12749900.0 2931.04 2967.82 2743.61 3464.88 3629.31 3467.6499999999996 3150.7900000000004 3327.5699999999997 3792.1 4028.22 4370.55 True False 3228.597023082394 3217.9286069651944 2929.8078732671947 3678.897768286578 3374.3997860397903 3439.410608095692 3270.695037628445 3261.199005921833 3632.7312243829733 3773.877501739672 3833.000057199142 0.8423159339688614 0.8395326269096396 0.764364161113024 0.9597959074842358 0.8803547445041102 0.8973155639890457 0.8532989796035678 0.8508215385482836 0.9477514140809825 0.9845753836219162 1.0 11.904258304329586 -8.98793785994467 0.2884054755637287 1.026264167229024 0.8240611107335984 0.5447161335706953 0.04674885509822504 0.7887740306770107 0.20563372318182951 0.05804441331851646 0.04325581327745228 1.028163400064581e-09 8.98793785994467 -0.20220305649542558 NRT(ph)PAAVR ddPTM_A549_PD325901_60min_R1 1 NRTPAAVR 8 1 Q92688;Q92688-2 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 NRT(1)PAAVR 92.23899999999999 0.0010257 27950000.0 1662.7 1676.2 1564.2 1469.8 2119.6 2308.6 1912.7 1880.8 1655.1 1710.6 2030.4 True False 1831.496079984953 1817.4592566244123 1670.3560182987185 1560.5862078420075 1970.7266082230342 2289.799527013889 1985.4888451696006 1843.2859685409428 1585.5419027652904 1602.5924240671775 1780.6736717660574 1.0285411128522446 1.02065824044103 0.9380472372807496 0.8764021350943157 1.1067309184554202 1.2859175509361493 1.1150211724085353 1.0351621399067394 0.8904168842979315 0.8999922049039674 1.0 10.798207435430019 -8.627749919945122 7.0968093232606 0.948420563229177 1.053191225405338 0.21179057726569395 0.10243934184631559 0.32191122330670163 19.573652049653926 0.019444902482111434 0.02204529883164345 2.3564057838729154e-09 8.627749919945122 0.10477066217616093 NRT(ph)PAKVEDAADSATKPENLSSK ddPTM_A549_MK2206_60min_R1 4 NRTPAKVEDAADSATKPENLSSK 23 3 P46013 P46013 MKI67 Antigen KI-67 1 NRT(1)PAKVEDAADSATKPENLSSK;NRT(1)PAKVEDAADSATKPENLSSK;NRT(1)PAKVEDAADSATKPENLSSK;NRT(1)PAKVEDAADSATKPENLSSK 127.08 4.419e-18 67073200.0 5292.08 6563.22 6381.7 6934.53 9128.2 6792.0 5819.62 6882.780000000001 10196.2 9925.099999999999 9732.6 True False 6185.253725066184 6897.259864220813 7286.7210209037175 8633.49016130288 7785.45387205342 7510.724931835287 6876.969623618563 7858.435142629731 7886.776979985617 7683.013016718685 7315.726813904917 0.8454735780059398 0.9427989917708889 0.9960351454149342 1.1801274679767026 1.0642078456587114 1.0266546472948852 0.9400254818902731 1.0741837882318532 1.0780578855125251 1.0502050188801024 1.0 12.836785487197695 -5.5725790539425395 2.228628367263967 1.0428642265472245 0.8476607441896563 0.5465422506182123 0.056923558463249826 0.22871886777172182 1.9319804969109144 0.008419081907928892 0.06764330434532674 2.6755985138737232e-06 5.5725790539425395 -0.19520348235756824 NRT(ph)PAKVEDAADSATKPENLSSK ddPTM_A549_PD325901_60min_R1 2 NRTPAKVEDAADSATKPENLSSK 23 3 P46013 P46013 MKI67 Antigen KI-67 1 NRT(1)PAKVEDAADSATKPENLSSK;NRT(1)PAKVEDAADSATKPENLSSK 195.89 3.6554e-61 82276000.0 8349.1 8145.3 8024.700000000001 8415.4 10377.7 9373.9 9730.0 9842.400000000001 10150.2 9832.900000000001 8572.7 True False 9196.694485717435 8831.733016932836 8569.304398441194 8935.20014523991 9648.806153121437 9297.562066306644 10100.2804744603 9646.085610786566 9723.622392271316 9212.049015906792 7518.312246822734 1.2232392302679356 1.174696225295133 1.13979096865292 1.1884582406132385 1.283373958989141 1.2366554834478745 1.3434239152183012 1.2830121035293576 1.2933251603616962 1.2252815144515763 1.0 12.876193118583595 -10.781830131332399 1.0145467302955622 0.9991179516612242 1.2419127455784458 0.07098014965286892 0.08557985947441893 0.25894412496416186 0.47047074483621293 0.04515397641050898 0.011215376801085227 1.6526080680947658e-11 10.781830131332399 0.24279479391722159 NRT(ph)PSDVK ddPTM_A549_MK2206_60min_R1 9 NRTPSDVK 8 1 P39687;H0YN26;H7BZ09;O95626 P39687 ANP32A;ANP32D Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D 1 NRT(0.996)PS(0.004)DVK;NRT(0.995)PS(0.005)DVK;NRT(0.998)PS(0.002)DVK;NRT(0.999)PS(0.001)DVK;NRT(0.996)PS(0.004)DVK;NRT(0.997)PS(0.003)DVK;NRT(1)PSDVK;NRT(0.999)PS(0.001)DVK;NRT(0.998)PS(0.002)DVK 97.45200000000001 0.00097393 159834200.0 16723.32 20804.600000000002 22329.98 19883.359999999997 28843.0 22491.79 20352.600000000002 20692.869999999995 30401.8 27259.499999999996 27983.599999999995 True False 19545.80757008091 21863.46527636865 25496.706937392795 24754.784092597958 24600.232908091053 24871.856288958123 24050.403971678425 23626.14769175657 23515.840841698526 21101.560017455038 21034.49981192997 0.9292261639135944 1.03940980160453 1.2121375438141881 1.176865830608341 1.1695183212361786 1.1824315534639787 1.143378933975789 1.123209389479122 1.11796529758037 1.0031881055468232 1.0 14.360469891622023 -10.394538781435111 0.7384776209285784 0.9990418751385675 1.1280206855109143 0.2705934431839434 0.07510232915139296 0.7506102521519401 0.7380979862008697 0.0539256650718631 0.015743668003304866 4.0314494497842384e-11 10.394538781435111 0.12897881037234682 NRT(ph)PSDVK ddPTM_A549_PD325901_60min_R1 5 NRTPSDVK 8 1 P39687;H0YN26;H7BZ09;O95626 P39687 ANP32A;ANP32D Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D 1 NRT(1)PSDVK;NRT(0.975)PS(0.025)DVK;NRT(0.973)PS(0.027)DVK;NRT(0.966)PS(0.034)DVK;NRT(0.999)PS(0.001)DVK 103.34 0.00085033 350220100.0 40356.600000000006 41899.9 42227.700000000004 42343.1 52217.1 44869.0 48492.5 47150.8 48543.0 46622.5 49822.200000000004 True False 44453.57232304132 45430.951620711865 45093.52565778853 44958.537118842636 48549.55103521565 44503.60174026953 50337.90862361419 46210.340304912956 46502.906522829726 43678.74739335436 43694.38524894742 1.0173749343255079 1.039743467309825 1.0320210571877724 1.028931677667342 1.1111164685944446 1.018519919360614 1.1520452418958522 1.0575807404459625 1.0642764798699156 0.9996421083509021 1.0 15.415160284128225 -3.726847370474764 15.6135826414551 1.0436610766781333 0.5016588815084483 0.0 0.04517732760934828 0.0 0.0 0.005966003841388677 0.0 0.00018756535765732918 3.726847370474764 -0.5420021951696851 NRT(ph)SVDFKDTDYKR ddPTM_A549_PD325901_60min_R1 1 NRTSVDFKDTDYKR 14 3 P49902-2;P49902 P49902-2 NT5C2 Cytosolic purine 5-nucleotidase 1 NRT(0.496)S(0.496)VDFKDT(0.002)DY(0.006)KR 49.425 0.012328 22795000.0 2919.6 2976.3 3231.2 3764.9 4412.6 4728.8 4450.8 4426.1 4931.6 4557.7 3872.7 True False 3215.9956427040793 3227.123246325757 3450.4886627840533 3997.449322291724 4102.674198643598 4690.290220628645 4620.177629571211 4337.81796329172 4724.342002100962 4269.926044178052 3396.3824510679724 0.9468885465748501 0.9501648571146654 1.0159305415381201 1.1769726701522527 1.207954127001668 1.3809664512763606 1.360323136788798 1.2771877212849567 1.3909923485252436 1.2571982412744473 1.0 11.729783207979535 -6.225231920182347 2.1730435606824607 1.2254733581230666 0.9477719055591503 0.5847713282494642 0.10643037586128419 0.28498454215115354 2.5855413466287485 0.02288418576026166 0.07415518213086665 5.953441353590681e-07 6.225231920182347 -0.2777014525639163 NRT(ph)SVHVPLEAR ddPTM_A549_MK2206_60min_R1 2 NRTSVHVPLEAR 12 1 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 NRT(0.5)S(0.5)VHVPLEAR;NRT(0.583)S(0.417)VHVPLEAR 50.077 0.011816 16118700.0 2443.7 2502.3 3040.9 2239.21 3524.3 2141.2 2345.24 2176.63 3534.0 3016.4 3922.8 True False 2856.136817271135 2629.656381812546 3472.1453456706076 2787.816550521957 3005.8801386119785 2367.7803627864705 2771.3397507217296 2485.17396814981 2733.55464263835 2334.993145019217 2948.6604962277506 0.9686217931582893 0.8918138880948452 1.1775331036287684 0.9454518599507937 1.0194053002905656 0.8030020295030894 0.9398639667968323 0.8428145496333392 0.9270496369912413 0.7918826694380028 1.0 11.525844007161805 -4.8877403295041715 18.96223531850396 0.9565917342228197 2.5875231958550926 0.0 0.10607966620189267 5732.917971501261 870310.4396005296 0.012172710031289124 41035.46183888466 1.2949698898862705e-05 4.8877403295041715 1.6309314616322728 NRT(ph)SVHVPLEAR ddPTM_A549_PD325901_60min_R1 1 NRTSVHVPLEAR 12 1 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 NRT(0.5)S(0.5)VHVPLEAR 50.07899999999999 0.011814 10393000.0 1735.3 1852.4 1774.5 1962.6 1878.3 1580.2 1408.8 1853.9 1683.9 2137.6 2080.4 True False 1911.4663785396574 2008.5082489983663 1894.9282409353507 2083.8253446120043 1746.374687783226 1567.3313751136395 1462.4126549249406 1816.9225101435845 1613.1315389199883 2002.631571194902 1824.5239887421706 1.0476520946471222 1.100839595089695 1.0385877372002748 1.1421200036117893 0.9571672932550364 0.859035773047939 0.8015310645124102 0.9958337195643964 0.8841383006600442 1.0976186575521647 1.0 10.833304404185112 -6.878620274144409 6.223586456754654 0.9300582467789874 1.0798633572711593 0.42075533951260846 0.07871841070586949 0.1317811943761639 6.714937482062511 0.00993390580441833 0.01894698617601195 1.322451415676268e-07 6.878620274144409 0.14980511049217193 NRTS(ph)VDFK ddPTM_A549_MK2206_60min_R1 2 NRTSVDFK 8 1 P49902-2;P49902 P49902-2 NT5C2 Cytosolic purine 5-nucleotidase 1 NRT(0.2)S(0.8)VDFK;NRT(0.15)S(0.85)VDFK 73.95100000000001 0.0014265 15390700.0 3922.3 5283.0 5163.700000000001 4971.299999999999 7129.5 5808.200000000001 4390.8 5908.299999999999 6356.1 5654.1 5666.299999999999 True False 4584.28834897188 5551.8821344825465 5895.990305974983 6189.2687231701375 6080.759994391542 6422.819868828873 5188.551524564216 6745.819618409888 4916.453498606008 4376.834883057008 4259.201328075687 1.0763258169444334 1.3035030999558066 1.3842948129993187 1.4531524214110012 1.4276761124928643 1.507986914469411 1.218198231288684 1.5838226697439677 1.1543134780217745 1.0276186885569147 1.0 12.056367210876124 -8.955850268667305 5.68943710465484 1.0662684310889567 1.3728440093491976 0.5228461681353899 0.13342607154092953 0.11023380249144701 7.816015051909998 0.023752109417092687 0.024787115386006756 1.1070053794794108e-09 8.955850268667305 0.30657557826024084 NRTS(ph)VDFK ddPTM_A549_PD325901_60min_R1 2 NRTSVDFK 8 1 P49902-2;P49902 P49902-2 NT5C2 Cytosolic purine 5-nucleotidase 1 NRT(0.224)S(0.776)VDFK;NRT(0.236)S(0.764)VDFK 68.786 0.0020563 20465600.0 6769.7 7593.2 8106.9 7129.1 9846.2 7142.3 9118.2 8542.2 8020.4 8146.299999999999 8686.2 True False 7456.95496041026 8233.105612337718 8657.082984749955 7569.448315639171 9154.636879545971 7084.135476822014 9465.198090670494 8371.819119773741 7683.330479692306 7631.941227743743 7617.852466358509 0.9788788892067949 1.0807646444580348 1.1364204049606936 0.9936459584990524 1.2017345990847308 0.9299386550352001 1.2425021529978584 1.0989736486424295 1.0085953375472887 1.001849440041987 1.0 12.895168632406605 -8.770673037971966 20.71492296988238 1.0040588127388712 1.0857861036404657 0.1385804919760577 0.0879133130440527 30.226715621307868 67810.23030037475 0.01373193246240113 0.014753754705099653 1.6956138763232711e-09 8.770673037971966 0.08172729090159447 NRVPS(ph)AGDVEK ddPTM_A549_PD325901_60min_R1 2 NRVPSAGDVEK 11 1 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 1 NRVPS(1)AGDVEK;NRVPS(1)AGDVEK 104.94 5.1467e-05 110437000.0 12209.3 14004.7 15068.9 14415.6 19058.2 17718.4 16433.4 18062.4 16757.4 16329.7 17584.4 True False 13448.77914798839 15184.925218498927 16091.566170656908 15306.018871796996 17719.61777922072 17574.107224916796 17058.78202970153 17702.13126232131 16053.144753428232 15298.639955155964 15421.630276695743 0.87207246618481 0.9846511001787852 1.0434413146950834 0.9925032955125729 1.1490106727560159 1.1395751882000276 1.10615944771285 1.147876777273783 1.0409499167987963 0.9920248171345649 1.0 13.912667665410764 -5.192550424455826 1.425935295979134 1.0512524518507445 0.7767397464238411 0.4773250045275267 0.05976582287293794 1.160158565005484 1.8454689613466533 0.009779650604902825 0.4733309385453868 6.418736914092654e-06 5.192550424455826 -0.2745127054269033 NRWDET(ph)PKTER ddPTM_A549_MK2206_60min_R1 1 NRWDETPKTER 11 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 NRWDET(0.86)PKT(0.14)ER 67.115 0.0016555999999999997 11387000.0 1311.7 1346.4 1042.0 924.39 2258.8 1752.9 1408.7 1500.5 2383.5 2254.6 2241.0 True False 1533.0828920139738 1414.926009060628 1189.7712684365724 1150.8655914974433 1926.5335122142658 1938.3907145191515 1664.6425554918476 1713.2004700885263 1843.6410556673775 1745.2842941122956 1684.4978515464445 0.910112702492636 0.8399690197061769 0.7063061952523769 0.6832098897846008 1.1436841610962114 1.1507231741136517 0.9882129288343295 1.0170392728703879 1.0944751600453704 1.0360857940602575 1.0 10.718102873071139 -6.762639597678521 24.99999999548684 1.0529905205086443 0.7832191778600143 0.7540933658188578 0.07587098162467368 12.9218854698292 269166.2992428428 0.011692641338428745 0.023005383765705184 1.7272706850925076e-07 6.762639597678521 -0.26977134264863 NRWDET(ph)PKTER ddPTM_A549_PD325901_60min_R1 1 NRWDETPKTER 11 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 NRWDET(0.989)PKT(0.011)ER 62.162 0.0025586 8537000.0 1109.8 1293.5 1656.9 1304.4 1401.0 1815.4 1539.6 1355.5 1732.0 1908.6 2560.3 True False 1222.466079008421 1402.5077845386443 1769.3471977491017 1384.9698254926614 1302.598593187616 1800.6159842939508 1598.1903205014462 1328.4634891308215 1659.2100631922433 1788.0906702762852 2245.3993310789174 0.5444314791084508 0.6246139673804647 0.7879877638063284 0.6168033482165426 0.5801189014168431 0.8019134767572734 0.7117621789499303 0.5916379642335126 0.7389376313722293 0.7963352645237964 1.0 11.132756327283314 -10.493688647146124 0.3904759500412538 1.0895726590480115 0.6416236863597384 0.39645223528497087 0.09970191227611984 0.8352674890848254 0.18261494485022928 0.15316914665491244 0.02693669735798037 3.2085687758540093e-11 10.493688647146124 -0.44794897268827305 NRWDETPKT(ph)ER ddPTM_A549_MK2206_60min_R1 1 NRWDETPKTER 11 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 NRWDET(0.06)PKT(0.94)ER 103.76 7.123100000000001e-05 12032000.0 1194.7 1427.9 1190.8 816.91 1890.8 1723.0 1595.6 1330.7 2323.6 1965.8 1802.2 True False 1396.3361523893382 1500.5740109459825 1359.6733459254049 1017.0529866724831 1612.6658247276132 1905.3267163651647 1885.499866219063 1519.3308000978354 1797.3083100267318 1521.7244146926064 1354.6640018103526 1.0307619826933436 1.1077093721695106 1.0036978498789058 0.7507787800615568 1.1904544762188047 1.4064939452284217 1.3918579542228253 1.1215554543912178 1.3267557915651673 1.1233223977746487 1.0 10.403719348025342 -6.93388911951395 24.99996211971123 1.1950348707746956 0.9832166398898243 0.4082357691931737 0.14193180534543495 62.1026462618997 23483.45013427671 0.02496309720275738 0.04717582136420541 1.1644232824137455e-07 6.93388911951395 -0.21181823088487128 NS(ph)AKLDADYPLR ddPTM_A549_MK2206_60min_R1 1 NSAKLDADYPLR 12 1 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 NS(0.931)AKLDADY(0.069)PLR 48.177 0.0094428 2971400.0 1285.1 1564.8 1237.0 1309.9 2121.3 1628.4 1573.0 1328.7 2327.4 1842.9 1781.3 True False 1501.9934623215356 1644.441636198806 1412.4252006295983 1630.825558803645 1809.2595800691188 1800.7162071555617 1858.7937387582015 1517.0472939730928 1800.2476160940848 1426.5876100503624 1338.9540486210087 1.1217662502073478 1.2281538995997805 1.0548720488834233 1.2179847101423946 1.3512484479452291 1.3448678160465048 1.3882431145957372 1.1330092287599434 1.3445178480532347 1.065449267299059 1.0 10.386890734522112 -10.926539329096233 1.13924653119347 0.9976849829556099 1.2519197966577134 0.3685151549793262 0.10467100049367123 0.39346650855059034 0.8934946795207184 0.08005412947679728 0.018162667663475605 1.1842971138632836e-11 10.926539329096233 0.25423481370210343 NS(ph)EEEEEEK ddPTM_A549_MK2206_60min_R1 2 NSEEEEEEK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(1)EEEEEEK;NS(1)EEEEEEK 128.54 5.109e-05 11660200.0 5625.5 6777.9 7282.2 7566.5 1563.15 159.187 653.9 586.29 1156.65 7157.799999999999 8357.2 True False 6574.946869729825 7122.866159248391 8314.92546162074 9420.292839673091 1333.212705692284 176.03206268022146 772.705165781302 669.3984029378216 894.6706217905062 5540.848008692003 6281.87659301381 1.0466533005506578 1.1338755312655873 1.3236371868348897 1.499598519676361 0.21223159766859706 0.02802220961742387 0.12300546728992441 0.10656025998381946 0.14242091651171337 0.8820370675307568 1.0 12.616979886296384 -6.762190528548006 24.999708382038623 0.44674273704159995 1.2477719239133094 0.6302401168952386 0.32496614133679547 14.242754294176361 474054.24775524845 0.06087191876309696 0.12006292453816649 1.729057641043567e-07 6.762190528548006 0.8010291868717094 NS(ph)EEEEEEK ddPTM_A549_PD325901_60min_R1 2 NSEEEEEEK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(1)EEEEEEK;NS(1)EEEEEEK 137.8 4.3405e-05 42079000.0 9009.7 6692.299999999999 9949.1 8838.0 8984.3 7867.4 7714.9 7518.1 9136.0 9299.5 7213.299999999999 True False 9924.35811140941 7256.283607628892 10624.305754798475 9383.903187445683 8353.273762152392 7803.330502828157 8008.494741255266 7368.145597664644 8752.045691295813 8712.327982937399 6326.1098288761295 1.5687932046498363 1.147037247837035 1.679437449268241 1.4833607764145929 1.3204439992526023 1.2335117021220707 1.2659430452344869 1.1647198352504162 1.383479883853149 1.3772015059190326 1.0 12.627102887656106 -14.137556861160942 0.1653141159383181 3.5098795547874105e-13 1.4709581221970476 0.07628765216832534 0.1811848170450355 27.953906894702385 0.3807859440766597 9.540073565705471 0.226098776176608 7.285227844842054e-15 14.137556861160942 1.4709581221966965 NS(ph)EEEEEEKKK ddPTM_A549_MK2206_60min_R1 4 NSEEEEEEKKK 11 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK 96.096 9.287399999999999e-05 167621000.0 30806.5 38914.1 40517.7 35650.2 8118.4400000000005 7998.089999999999 6293.07 6609.6900000000005 9635.3 48309.7 48418.7 True False 36005.884053387585 40894.66147444013 46263.7191200888 44384.50060039827 6924.228230432435 8844.44257509754 7436.439360182497 7546.633798826675 7452.9199344123645 37396.5052174562 36395.00050186156 0.9893085192166964 1.1236340406795273 1.2711558863070345 1.2195219120309684 0.19025218120489568 0.2430125691204526 0.20432584854071184 0.20735358413968624 0.20477867376402856 1.027517645329979 1.0 15.15145266385946 -6.7478680412029535 24.99472080887138 0.4976065515368557 1.1575466812121487 0.5596408132339747 0.3007113982100995 178.42741261669184 328612.8720897045 0.05274933754794821 0.10933454520354516 1.787030475071963e-07 6.7478680412029535 0.6599401296752929 NS(ph)EEEEEEKKK ddPTM_A549_PD325901_60min_R1 4 NSEEEEEEKKK 11 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK 173.34 1.0854e-15 694513000.0 43635.2 43358.0 47461.4 42214.7 53186.4 44916.3 51541.6 51033.7 48251.9 48101.4 48056.0 True False 48065.01338146354 47011.930824914256 50682.416012583286 44822.206142460156 49450.770747119095 44550.51654475182 53503.04379264574 50015.79281833684 46224.04044350223 45064.2693949637 42145.41665208317 1.1404564766377219 1.1154695945470157 1.2025605638443284 1.0635131813377072 1.1733368578448928 1.0570667010489685 1.269486649860921 1.186743346998437 1.0967750259794253 1.0692567062980087 1.0 15.363088125002745 -9.69123381145223 0.9637832192000886 1.0156875858461345 1.1480071263152554 0.32163959920484986 0.06148176543208264 0.30209562793953604 0.5836447003379804 0.018471483322505616 0.011737443799539544 2.0359456889633769e-10 9.69123381145223 0.13231954046912087 NS(ph)ERKTPEGR ddPTM_A549_MK2206_60min_R1 1 NSERKTPEGR 10 2 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 NS(0.971)ERKT(0.029)PEGR 41.401 0.029252999999999998 219120000.0 3073.3 3607.2 2513.0 1982.4 2661.3 2077.9 2169.2 2192.2 2476.5 5428.7 4946.8 True False 3591.997905029006 3790.7910724030753 2869.3811876977993 2468.088088993317 2269.8262954027937 2297.78199880161 2563.3155614204 2502.951063330934 1915.57670415786 4202.352899604105 3718.373035265484 0.9660133265172909 1.0194757321147638 0.7716765263958869 0.6637548372865448 0.6104353366043418 0.6179535987941976 0.6893648208798892 0.6731307051747241 0.5151652849217405 1.130159039921089 1.0 11.86045579648247 -5.826852661654732 4.836375906478982 0.7254409525650016 0.9935448508526922 0.24393307572457068 0.17006494870114855 0.20363939203964831 9.121048328907928 0.025181603064360496 0.08533165727635092 1.4898664426960988e-06 5.826852661654732 0.26810389828769055 NS(ph)FHLLR ddPTM_A549_PD325901_60min_R1 2 NSFHLLR 7 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NS(1)FHLLR;NS(1)FHLLR 65.22399999999999 0.007742100000000001 11831500.0 679.35 669.19 747.88 793.8299999999999 738.08 812.1700000000001 959.76 658.1800000000001 895.44 622.24 886.56 True False 748.3171118889628 725.584989822509 798.6356341677822 842.8630761812628 686.2398070377704 805.5559567941058 996.2841920008243 645.0520835677785 857.8077707764793 582.951660207857 777.5187403668812 0.9624425406593554 0.9332057893294422 1.0271593373954393 1.084042136120794 0.8826022723438927 1.036059859359782 1.2813635739901474 0.829628985229865 1.1032631449779755 0.7497589832147127 1.0 9.602733638405144 -7.499941125800649 24.699008177856143 1.0508427504696678 0.9815712779434671 0.0 0.14242645280249114 1343.444296130792 1446609.5485214314 0.015839747470193236 0.025209896706717135 3.162706376610818e-08 7.499941125800649 -0.0692714725262007 NS(ph)FTPLSSSNTIR ddPTM_A549_PD325901_60min_R1 1 NSFTPLSSSNTIR 13 0 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NS(0.804)FT(0.196)PLSSSNTIR 131.86 3.6823e-08 7170800.0 2706.4 2742.5 3223.6 3639.5 3995.0 4041.2 3624.9 4197.8 3732.2 3131.1 3494.9 True False 2981.151735653621 2973.6200998045865 3442.3728810815414 3864.303649095786 3714.404982001803 4008.289807055587 3762.847553121389 4114.071585889605 3575.3486130751116 2933.4018116431325 3065.049455996448 0.9726276128501973 0.9701703487971493 1.1231051669808785 1.2607638814883333 1.2118580908164334 1.3077406627856487 1.2276629160941503 1.3422529211856125 1.1664896976067765 0.9570487699323217 1.0 11.581694637320455 -4.268574553173325 10.942734469852887 1.1277781375338967 1.125322856563623 0.0 0.1378489457365528 0.0 0.0 0.019616093817764507 8637916.83094138 5.387973447740071e-05 4.268574553173325 -0.002455280970273588 NS(ph)GIWESPELDR ddPTM_A549_MK2206_60min_R1 2 NSGIWESPELDR 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 NS(1)GIWESPELDR;NS(1)GIWESPELDR 115.91 2.5282e-05 2944800.0 2122.5699999999997 2218.59 1991.86 1365.27 3156.8999999999996 2603.64 2250.6400000000003 2611.11 3162.5 3071.6 3171.5 True False 2480.80792414584 2331.506754635934 2274.335699374349 1699.7612112892991 2692.524191920141 2879.155456643643 2659.552155243967 2981.2428386890065 2446.198799474757 2377.7234266811533 2383.9290210528984 1.040638333707668 0.9780101395830103 0.9540282782286253 0.7130083137033055 1.1294481371475342 1.2077353944758054 1.1156171730605198 1.2505585578937646 1.0261206511905108 0.9973969047245357 1.0 11.219125566393615 -6.8571036758095145 21.317346509942148 1.0606568030018229 0.9268358982167008 0.3440180587175312 0.11134283824991024 6.157748524143132 1362.9240499568946 0.017540352722022208 0.03314821369309922 1.3896208580246053e-07 6.8571036758095145 -0.1338209047851221 NS(ph)GIWESPELDR ddPTM_A549_PD325901_60min_R1 2 NSGIWESPELDR 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 NS(1)GIWESPELDR;NS(0.999)GIWES(0.001)PELDR 67.13600000000001 0.001895 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NS(ph)GPQGPRRTPTMPQEEAAEK ddPTM_A549_MK2206_60min_R1 1 NSGPQGPRRTPTMPQEEAAEK 21 2 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 NS(0.587)GPQGPRRT(0.343)PT(0.071)MPQEEAAEK 96.303 4.1464e-07 8135300.0 1002.9 1017.6 1233.6 1027.9 1434.4 933.54 967.72 1039.0 1360.9 1802.8 1504.9 True False 1172.165001449123 1069.391493478978 1408.5430295041804 1279.7355461441853 1223.4016601381895 1032.3265831663 1143.542197629425 1186.2814318040512 1052.6583229107337 1395.5462279010226 1131.1917968729335 1.0362212709546303 0.945367086673722 1.2451849751721649 1.1313161478733191 1.0815156753436164 0.912600839238813 1.0109180430680569 1.0487005254841906 0.9305745726062566 1.2336954986403459 1.0 10.14362784788734 -7.169857532398731 7.251223024740536 0.973539373443512 1.091943902576329 0.0 0.10898911107494681 0.23899058165003442 16.593773193616787 0.011397883188815655 0.019807605939022165 6.76304796584928e-08 7.169857532398731 0.11840452913281685 NS(ph)GPQGPRRTPTMPQEEAAEK ddPTM_A549_PD325901_60min_R1 1 NSGPQGPRRTPTMPQEEAAEK 21 2 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 NS(0.426)GPQGPRRT(0.35)PT(0.224)MPQEEAAEK 47.52 0.0059305 12365000.0 1916.8 1664.8 1911.3 1520.4 2331.3 2087.2 2163.8 1868.1 1913.4 1970.7 1933.2 True False 2111.3921249264213 1805.0985386161092 2041.012311580578 1614.3116549210695 2167.5575305483885 2070.2025352089545 2246.1445930767945 1830.8392800039014 1832.9864520277354 1846.2696656782346 1695.4286555644906 1.2453441305222226 1.0646856372821563 1.2038326147678717 0.9521554620554569 1.278471685278142 1.2210496315574444 1.3248240117358072 1.0798680758373322 1.0811345237157415 1.0889692465788374 1.0 10.727434361016638 -8.505058875247068 22.378468971231108 1.0405338855372586 1.178427749597079 0.25574206204575856 0.0991574949618352 178.3357076033381 223956.93000205277 0.016164520943616787 0.019311808997419574 3.125655608066403e-09 8.505058875247068 0.1378938640598204 NS(ph)GSDGSPS(ph)PLLAR ddPTM_A549_MK2206_60min_R1 1 NSGSDGSPSPLLAR 14 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 2 NS(0.498)GS(0.498)DGS(0.103)PS(0.9)PLLAR 45.083999999999996 0.057642 2105100.0 553.46 509.97 540.71 332.81 624.91 755.63 562.04 518.78 699.56 550.41 758.52 True False 646.8705172021454 535.9252947420147 617.3908085953351 414.34846494040886 532.9865668132713 835.5902650534009 664.155392836401 592.3186536971177 541.110776967766 426.0719987236533 570.1585499129893 1.134544974026721 0.9399583586421726 1.0828405689777936 0.7267249872928183 0.9348041292980861 1.465540182079035 1.164860884639468 1.0388665640241828 0.9490531660892286 0.7472868709741795 1.0 9.15521935004564 -5.236693082849026 21.517638702867604 1.0087090905670997 1.1345459850034885 0.036320816706450154 0.19096950868133739 2973.4013727224497 2585181.377502539 0.023989812794065136 1.5856902670235018 5.798383250676685e-06 5.236693082849026 0.1258368944363888 NS(ph)IEVAGLSHGLEGLR ddPTM_A549_PD325901_60min_R1 2 NSIEVAGLSHGLEGLR 16 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 NS(1)IEVAGLSHGLEGLR;NS(1)IEVAGLSHGLEGLR 101.75 3.6688e-07 9501100.0 758.22 732.28 769.47 873.1 858.54 989.09 825.76 1009.97 1013.72 828.08 1012.8699999999999 True False 835.1939362279376 793.9918055368834 821.6908613989989 927.0294040460311 798.2391122022102 981.0351789717447 857.1847486732099 989.8253560438625 971.1168737062588 775.794887478983 888.2934111119413 0.940223045426471 0.8938395755328031 0.9250219028084751 1.0436072050625718 0.8986209986664163 1.1044044306753462 0.9649792939477166 1.1143000090531194 1.0932388572945075 0.8733543193885276 1.0 9.794892479906562 -6.725080058908232 0.8922363707272865 1.048176255073526 0.9132654371489483 0.14289168373367067 0.07923133391191857 0.47223292637739667 0.6898761816569843 0.010005931578336222 0.03763856906655215 1.883301885007479e-07 6.725080058908232 -0.13491081792457782 NS(ph)IQFTDGYEVK ddPTM_A549_MK2206_60min_R1 2 NSIQFTDGYEVK 12 0 B4DG22;B1AXG1;B7ZB17;P51812;A0A2R8Y603 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 NS(0.999)IQFT(0.001)DGYEVK;NS(0.995)IQFT(0.003)DGY(0.002)EVK 79.81 0.00087176 3825600.0 4362.6 4102.1 4895.5 3651.8 5808.3 4159.5 4635.5 4640.1 6114.799999999999 7026.700000000001 6586.9 True False 5098.900224670401 4310.879368514264 5589.75551308181 4546.4911639355305 4953.906764208486 4599.65552914736 5477.710347116109 5297.848384710275 4729.8075633290855 5439.3635897449085 4951.190940808241 1.0298330817025707 0.8706752415835024 1.1289719140117285 0.9182621349669365 1.0005485192214787 0.9289998273418443 1.1063419715786436 1.070014961662021 0.9552868430796134 1.0985970152985005 1.0 12.273559872024249 NS(ph)KHQEIFEK ddPTM_A549_MK2206_60min_R1 2 NSKHQEIFEK 10 1 A0A096LNH6;Q14185 A0A096LNH6 DOCK1 Dedicator of cytokinesis protein 1 1 NS(1)KHQEIFEK;NS(1)KHQEIFEK 94.71700000000001 0.00024132 4985200.0 1859.3200000000002 2472.2400000000002 2557.36 2802.48 3226.85 3006.88 2813.2599999999998 2912.27 3912.97 3273.5 3534.83 True False 2173.1277599904124 2598.066456209187 2920.0321027341197 3489.087725808108 2752.1846395823463 3325.0660457945955 3324.392926572726 3325.093190952823 3026.6885427290863 2534.0140764555135 2657.0341546550285 0.8178772396219185 0.9778069475160746 1.0989817716939498 1.3131512516296984 1.0358107872872533 1.2514201369858944 1.2511668021837465 1.251430353323603 1.1391229342785965 0.9537002270053668 1.0 11.37560105762966 -5.49151678642614 2.4247691262810855 1.120297148051835 0.8114173786425338 0.4344617465194829 0.11239606930262414 0.2933754190793164 2.834546877043436 0.01664271722323657 0.15161102918294359 3.224654676991961e-06 5.49151678642614 -0.30887976940930106 NS(ph)KHQEIFEK ddPTM_A549_PD325901_60min_R1 4 NSKHQEIFEK 10 1 A0A096LNH6;Q14185 A0A096LNH6 DOCK1 Dedicator of cytokinesis protein 1 1 NS(1)KHQEIFEK;NS(1)KHQEIFEK;NS(1)KHQEIFEK;NS(1)KHQEIFEK 88.28200000000001 0.00029811 15617400.0 5858.63 7129.91 7599.89 8121.500000000001 9175.5 8189.800000000001 7906.0 8652.7 9127.3 9317.8 8044.700000000001 True False 6453.3938047045485 7730.772538121319 8115.664237251148 8623.146609735239 8531.044533756582 8123.104984119537 8206.867156329205 8480.115110588165 8743.711322040741 8729.472517814298 7055.252899554962 0.9146934768435617 1.0957470480766136 1.150300967632652 1.2222306886092174 1.2091762910858534 1.1513556069169306 1.1632279201284033 1.2019576379924073 1.2393193336261958 1.237301148817067 1.0 12.784482082636215 -5.273880868246641 2.7746202401697015 1.1423322082584741 0.875694464739881 0.5007075710322842 0.06989434957009817 0.38261842155723236 4.050071128082523 0.01307749418807441 0.22805340872712918 5.322542424366549e-06 5.273880868246641 -0.26663774351859315 NS(ph)KSPEEHLEEMMK ddPTM_A549_MK2206_60min_R1 2 NSKSPEEHLEEMMK 14 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NS(0.5)KS(0.5)PEEHLEEMMK;NS(0.5)KS(0.5)PEEHLEEMMK 118.53 1.232e-06 14171600.0 1170.3400000000001 1397.3899999999999 1361.8899999999999 1167.22 2323.13 1635.8899999999999 1413.92 1519.88 2182.52 1742.3 2043.88 True False 1367.8647799341582 1468.5111822647305 1555.0264805864533 1453.1889523984971 1981.4006544317015 1808.9987939841035 1670.8109619230734 1735.3276444372864 1688.1827047682666 1348.7132199200973 1536.3281877816805 0.8903467311299103 0.9558577353092299 1.0121707672575946 0.9458844561699874 1.2896988222891785 1.1774820044121788 1.0875351863038938 1.1295292621968638 1.0988424987540262 0.8778809310708006 1.0 10.585270719673021 NS(ph)KSPEEHLEEMMK ddPTM_A549_PD325901_60min_R1 4 NSKSPEEHLEEMMK 14 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NS(0.5)KS(0.5)PEEHLEEMMK;NS(0.5)KS(0.5)PEEHLEEMMK;NS(0.606)KS(0.394)PEEHLEEMMK;NS(0.5)KS(0.5)PEEHLEEMMK 118.24 1.2734e-06 27035800.0 6027.66 6455.950000000001 6424.21 6406.02 7781.299999999999 7102.699999999999 6597.889999999999 7172.75 7704.0 7256.200000000001 7336.5 True False 6639.583605871236 7000.015563658498 6860.195522512981 6801.705306272998 7234.768332027695 7044.857966092683 6848.976314453944 7029.6838743364815 7380.227671381663 6798.0422936491605 6434.157009905277 1.0319275074651906 1.087946028187079 1.0662151252995264 1.057124545733324 1.1244314244880704 1.0949154574946247 1.0644714301982465 1.092557092329951 1.1470387900108632 1.0565552384226384 1.0 12.65153542653522 -5.251448447935197 22.27417917980935 1.0767093214466157 1.0319273957498085 0.11683774550566906 0.03676272521419715 740.5639026330246 1650876.324272707 0.007148519647979591 0.11828960437267219 5.60468942769564e-06 5.251448447935197 -0.04478192569680717 NS(ph)LESISSIDR ddPTM_A549_PD325901_60min_R1 2 NSLESISSIDR 11 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NS(0.85)LES(0.15)ISSIDR;NS(0.899)LES(0.098)IS(0.001)S(0.001)IDR 180.11 3.4260000000000004e-16 23886000.0 5143.200000000001 4319.3 5559.7 4070.3 6366.299999999999 4382.299999999999 5017.4 4413.3 5188.9 5051.2 5818.1 True False 5665.333877776279 4683.302569584667 5937.014675192037 4321.713186677997 5919.153050542697 4346.612001746931 5208.33990262663 4325.273269333128 4970.828577885815 4732.266369956814 5102.510583974631 1.1103032094767815 0.9178427937598869 1.1635477433086212 0.8469777995661839 1.1600471871891616 0.851857518022258 1.020740636772881 0.8476755115251384 0.9741927029995024 0.9274388150843553 1.0 12.3169915544594 -6.254949368752578 24.997296289694575 0.9749586692104902 1.049292384723145 0.15529953161400067 0.10489351824116393 881.0633151870874 3393548.319681244 0.012615378137918675 0.032565817185328846 5.559690698984846e-07 6.254949368752578 0.07433371551265477 NS(ph)LESISSIDRELSPEGPGK ddPTM_A549_MK2206_60min_R1 2 NSLESISSIDRELSPEGPGK 20 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NS(1)LESISSIDRELSPEGPGK;NS(0.919)LES(0.058)IS(0.012)S(0.012)IDRELSPEGPGK 72.584 0.00015199 10488700.0 2061.59 2662.8 1976.77 2120.1000000000004 3029.9 2520.0 2325.3999999999996 2160.98 3943.4 3325.3 3380.0 True False 2409.535990963704 2798.325146261619 2257.105710467721 2639.524595174907 2584.2057236842606 2786.6647273593835 2747.8950795348487 2467.305532723693 3050.226196315812 2574.1124204788503 2540.6527167456416 0.9483925036594979 1.1014197760353621 0.888395999811765 1.0389159359630669 1.0171424479432225 1.0968302393287588 1.081570519820854 0.9711305746202495 1.200567939180169 1.013169727414012 1.0 11.310983470730292 -7.028831083527475 1.8701883946347146 1.085948311292396 0.992207518736389 0.0942830014204108 0.07745211264053282 0.45879679556787584 3.1839333421037255 0.01355815329846831 0.027945620520073978 9.35769565850305e-08 7.028831083527475 -0.09374079255600698 NS(ph)LESISSIDRELSPEGPGK ddPTM_A549_PD325901_60min_R1 2 NSLESISSIDRELSPEGPGK 20 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NS(0.999)LES(0.001)ISSIDRELSPEGPGK;NS(0.99)LES(0.008)IS(0.001)S(0.001)IDRELSPEGPGK 124.45 2.5175e-15 21362000.0 2725.0 2572.0 3085.3 3159.8999999999996 3492.1 2901.2 3045.3 3688.0 3739.0 3576.7 3630.3 True False 3001.6399939610246 2788.751466434785 3294.6870114160834 3355.079846346414 3246.8269430909895 2877.573589089795 3161.1905579521017 3614.4399468199713 3581.8628327227457 3350.8665515965577 3183.796114367768 0.9427864995548197 0.8759202430864734 1.0348297733475738 1.0537985869150603 1.0197973822628834 0.9038184248369239 0.9928998102882115 1.135261121310125 1.1250289604157095 1.0524752312105783 1.0 11.636532235427874 -8.026274770219963 22.348564948072777 1.0662968257658416 0.9739132181529041 0.39997419252847644 0.06065886314795903 197.94844883923656 168369.14530280448 0.01155820050372559 0.014959272679139062 9.412938685787409e-09 8.026274770219963 -0.09238360761293751 NS(ph)LESISSIDRELSPEGPGKEK ddPTM_A549_PD325901_60min_R1 2 NSLESISSIDRELSPEGPGKEK 22 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NS(0.398)LES(0.236)IS(0.183)S(0.183)IDRELSPEGPGKEK;NS(0.987)LES(0.004)IS(0.004)S(0.004)IDRELSPEGPGKEK 58.477 0.00060779 14493200.0 3003.2 2244.8999999999996 2518.2 2500.4 3049.7 2821.1 2785.8999999999996 2814.7 3058.6 3478.8 2977.7 True False 3308.0826531610114 2434.085601477234 2689.100195166749 2654.8440291795855 2835.4995928938415 2798.1258969327237 2891.9189490029744 2758.5586004105667 2930.057678568012 3259.147974304276 2611.4617771955213 1.2667551491845304 0.9320778204501335 1.0297298695501507 1.016612248497335 1.085790195228864 1.0714787868492806 1.1073947067717143 1.0563273889357914 1.1219990674014897 1.2480167248721183 1.0 11.350641872441173 -5.238162560623529 24.368194551294952 1.0540867120523625 1.266755487332617 0.343585149596771 0.07756782085734217 2942.9447290896987 3080866.2893535034 0.00794271981949556 0.6219646814056786 5.778797009586934e-06 5.238162560623529 0.21266877528025452 NS(ph)LGGDVLFVGK ddPTM_A549_MK2206_60min_R1 1 NSLGGDVLFVGK 12 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 NS(1)LGGDVLFVGK 53.251999999999995 0.02311 400230.0 420.44 846.93 888.1 739.41 1037.9 825.91 1041.5 817.85 1030.8 899.03 1065.4 True False 491.3999932289052 890.0351194694883 1014.0459342596172 920.565483193376 885.2262848978158 913.3072480053123 1230.727068605636 933.7827420605806 797.3254458493526 695.9384985965481 800.8317764558599 0.6136120065110704 1.1113883659916748 1.2662408811340533 1.1495116830495995 1.1053835660910585 1.1404483124373772 1.5368109817673687 1.1660160966552864 0.9956216390138454 0.8690195857068451 1.0 9.645355410234533 -8.764046734382381 23.920913694952496 0.9979324245129163 1.1526006557064028 0.11940810043476069 0.2071305438983827 67.00227123073678 614703.3726407937 0.03450454910734911 0.03757542157013737 1.7216832948634342e-09 8.764046734382381 0.1546682311934865 NS(ph)LKEANHDGDFGITLAELR ddPTM_A549_MK2206_60min_R1 4 NSLKEANHDGDFGITLAELR 20 1 P20020-6;P20020;P20020-1;P20020-4;F8W1V5;P20020-2;P20020-5 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1 1 NS(1)LKEANHDGDFGITLAELR;NS(1)LKEANHDGDFGITLAELR;NS(1)LKEANHDGDFGITLAELR;NS(1)LKEANHDGDFGITLAELR 208.96 1.0568999999999998e-66 54156300.0 3521.75 4286.7 3805.73 3161.15 4794.72 3910.95 3539.2 4511.22 5133.66 4725.16 4561.25 True False 4116.135301479161 4504.874720023911 4345.439740333127 3935.6318919094183 4089.423039527178 4324.8041331215 4182.226827853161 5150.699250031827 3970.8942067704575 3657.7430742338574 3428.5657409041587 1.200541454513187 1.3139239730126673 1.2674220267939724 1.147894539385889 1.192750365185864 1.2614032980394279 1.2198181816838232 1.5022897734122254 1.1581793982819415 1.066843499774708 1.0 11.74338947003259 -9.575423902700571 1.2834040651115708 1.0357605120679159 1.2557417806458864 0.45251342889110835 0.09299418742272633 0.2319262681977944 0.782693789625925 0.02442197167228131 0.018251983538164013 2.6581292675101267e-10 9.575423902700571 0.2199812685779705 NS(ph)LKEANHDGDFGITLAELR ddPTM_A549_PD325901_60min_R1 4 NSLKEANHDGDFGITLAELR 20 1 P20020-6;P20020;P20020-1;P20020-4;F8W1V5;P20020-2;P20020-5 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1 1 NS(1)LKEANHDGDFGITLAELR;NS(1)LKEANHDGDFGITLAELR;NS(1)LKEANHDGDFGITLAELR;NS(1)LKEANHDGDFGITLAELR 215.37 5.0406999999999986e-67 163081000.0 12462.7 13096.3 13610.099999999999 14664.6 17051.100000000002 16207.5 14462.3 17107.6 14156.0 15610.3 16057.899999999998 True False 13727.904129445167 14199.97116246885 14533.763230179891 15570.399036276964 15853.489559101625 16075.5114935795 15012.670740574227 16766.37549734743 13561.072548816059 14624.662993929536 14082.880099414977 0.9747937944892 1.008314425900618 1.0320164005929189 1.1056260456924418 1.1257277948251652 1.141493173278334 1.0660227620057545 1.190550184265499 0.9629473838507938 1.038471029412305 1.0 13.781654790245724 -8.817703797311857 24.999997730878384 0.9825028419399722 1.080428724788098 0.23991545953977833 0.06125514484257182 68.64400013030495 30500.236485477213 0.010713360403525878 0.011405242315712615 1.521584945379519e-09 8.817703797311857 0.09792588284812576 NS(ph)LSDPNIDR ddPTM_A549_MK2206_60min_R1 2 NSLSDPNIDR 10 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NS(0.978)LS(0.022)DPNIDR;NS(0.966)LS(0.034)DPNIDR 117.79 7.082800000000001e-05 26674000.0 1397.56 1579.33 1249.84 1313.8600000000001 1416.35 1467.7199999999998 1031.07 1259.0500000000002 1468.94 1247.5500000000002 1454.23 True False 1633.4339609385138 1659.7111511361586 1427.0861057032305 1635.7557589814166 1208.0067912274997 1623.0331562063147 1218.4020726137435 1437.524193178913 1136.2274354151618 965.7275885388952 1093.104556293791 1.494307156194398 1.5183462017242588 1.305534861680401 1.4964311964150105 1.105115502695633 1.484792234065207 1.1146253719267059 1.315083891016692 1.0394499125203362 0.8834722927267162 1.0 10.094215687165224 -7.698457886177342 0.37385384397851634 0.9752555172776941 1.5278473687043692 0.6639579466078074 0.12788594455606697 0.5513564320349287 0.16487312845096425 0.048023232524979344 0.11247990366456323 2.0023597823251152e-08 7.698457886177342 0.5525918514266751 NS(ph)LSDPNIDR ddPTM_A549_PD325901_60min_R1 2 NSLSDPNIDR 10 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NS(0.992)LS(0.008)DPNIDR;NS(0.869)LS(0.131)DPNIDR 86.31299999999999 0.00077199 6951000.0 871.23 710.61 672.8 752.41 796.6600000000001 632.55 814.83 1029.48 1797.27 2862.8 2504.6000000000004 True False 959.6766282343726 770.4955985860119 718.4602538750654 798.8846568529078 740.7053499277995 627.398722521284 845.8388015420844 1008.9462137885633 1721.7369920747822 2682.0423194314944 2196.5500779675267 0.43690177513383344 0.35077533916228915 0.3270857610220562 0.36369972388342625 0.33721304938932967 0.28562914582025717 0.3850760381137047 0.4593322155086689 0.7838368946579674 1.2210248909568202 1.0 11.101023675698425 -8.849982925548243 1.2374106988792288 0.933634724805235 0.3426748095820955 0.8881472172734306 0.10053702359331605 0.06117208087450297 0.18672668086249058 0.013323961652468677 0.01365074718730101 1.4125930801620755e-09 8.849982925548243 -0.5909599152231395 down NS(ph)LTGEEGQLAR ddPTM_A549_MK2206_60min_R1 2 NSLTGEEGQLAR 12 0 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 NS(0.999)LT(0.001)GEEGQLAR;NS(0.986)LT(0.014)GEEGQLAR 243.41 7.8347e-51 112464000.0 7304.200000000001 10294.5 10112.7 9519.699999999999 13106.0 10552.4 9770.9 10521.9 13651.5 12161.3 10678.199999999999 True False 8536.97038945527 10818.446078635361 11546.83292353026 11852.026927355575 11178.124761413223 11669.047963883795 11546.146053421813 12013.411546967316 10559.457046965885 9414.053883610328 8026.508236672574 1.0635970384295412 1.3478396532637458 1.4385873138176775 1.4766105731013226 1.392651004871723 1.4538137406461136 1.4385017386101036 1.4967170272222299 1.3155729410106924 1.1728703947001702 1.0 12.97055679479353 -10.118455777196372 0.7666253844027652 1.0146714682191007 1.3935887486500702 0.4435949072768214 0.12258754121255717 0.30895251682138714 0.35729200565247593 0.06037119605672152 0.023987652567990157 7.612796537061042e-11 10.118455777196372 0.3789172804309695 NS(ph)LTGEEGQLAR ddPTM_A549_PD325901_60min_R1 2 NSLTGEEGQLAR 12 0 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 NS(0.982)LT(0.018)GEEGQLAR;NS(0.92)LT(0.08)GEEGQLAR 264.43 1.2234999999999999e-76 145390000.0 9527.8 10554.5 11530.6 12109.8 13184.2 12163.5 11535.699999999999 12217.2 12932.1 11137.800000000001 11886.8 True False 10495.05524200436 11443.964756020969 12313.135855130542 12857.794842648746 12258.187275020828 12064.444488795578 11974.697376077249 11973.518361792008 12388.608809589154 10434.557407211158 10424.798956633545 1.0067393419924044 1.0977635927203089 1.1811389271248636 1.2333854011128942 1.175867978463091 1.1572831801344896 1.1486741783598107 1.1485610812832967 1.1883786786800326 1.0009360804575902 1.0 13.347731940959001 -10.81711471256619 0.9728687235015221 0.9965007600524721 1.1537564942357632 0.511340145569328 0.05547907602540412 0.39702781787370894 0.642505663249148 0.044791775011633464 0.010152780999964955 1.5236502506051564e-11 10.81711471256619 0.15725573418329108 NS(ph)MDRPK ddPTM_A549_MK2206_60min_R1 2 NSMDRPK 7 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 NS(1)MDRPK;NS(1)MDRPK 66.62100000000001 0.0067297 8946100.0 2994.5 3534.2 2855.0 3022.5 4165.7 3559.0 3132.1 3420.1000000000004 4699.6 5002.1 4773.8 True False 3499.898391504036 3714.0756842112846 3259.8819303132595 3763.0126356851797 3552.931048269422 3935.611017727 3701.162027440918 3904.909648616974 3635.1481037190733 3872.1221358906723 3588.333709822588 0.9753547675690052 1.0350418842162017 0.9084667686814537 1.0486796769721922 0.9901339550844293 1.0967795461592067 1.0314430949689761 1.0882236615640852 1.0130462765400936 1.0790864086278407 1.0 11.809098349701527 -6.355366275510601 20.027231900359524 1.0215568184442532 0.9789768619123846 0.224018583671578 0.0466121236325851 13.37430298386862 2847.3051921256047 0.006083510934647999 0.014136831707871032 4.411981924334503e-07 6.355366275510601 -0.042579956531868524 NS(ph)MDRPK ddPTM_A549_PD325901_60min_R1 3 NSMDRPK 7 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 NS(1)MDRPK;NS(1)MDRPK;NS(1)MDRPK 45.598 0.015832 50449200.0 10844.8 11510.9 11521.2 10864.0 12702.1 10995.0 10855.5 11300.6 12352.8 11504.5 12808.8 True False 11945.756112480201 12480.963940507067 12303.097914603752 11535.04460606584 11809.948315866108 10905.460365380633 11268.611992857534 11075.2006678508 11833.654774019134 10778.103906629749 11233.398801673105 1.0634142278204346 1.111058563918175 1.0952248853455933 1.0268525857328066 1.051324583447276 0.9708068375313419 1.0031346871775961 0.9859171621505378 1.0534349383426702 0.9594695333904156 1.0 13.455506878298385 -6.312634866915449 3.7973927465304698 1.0189684231832556 1.0926176038577355 0.55835672197755 0.031675802224644646 0.13371358248753737 3.9835092786311255 0.00420841474068201 0.010687519592920185 4.868163245076272e-07 6.312634866915449 0.0736491806744799 NS(ph)PEDKR ddPTM_A549_MK2206_60min_R1 4 NSPEDKR 7 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 NS(1)PEDKR;NS(1)PEDKR;NS(1)PEDKR;NS(1)PEDKR 62.271 0.011462 106604200.0 13578.6 13093.699999999999 10364.43 8496.609999999999 1219.14 703.1999999999999 891.1700000000001 1189.6000000000001 1529.07 19104.0 16957.4 True False 15870.335715103263 13760.113402285464 11834.262022765897 10578.279831427313 1039.806120984993 777.6121572536177 1053.0840535086747 1358.2294429972073 1182.7380864230404 14788.39313169578 12746.409579568792 1.2450828302694597 1.0795285775487347 0.9284388634219808 0.8299027083189943 0.08157639329679922 0.06100636829527678 0.08261809311358252 0.10655780629976869 0.09278990126904836 1.1602006854855882 1.0 13.637803304185013 -6.546538839776898 4.603962892218325 0.4210433889754613 1.060044923897941 0.42290016162085975 0.36989337662276217 0.184187174758867 9.612229330806493 0.06144565162544238 0.13534222302471033 2.840934103511985e-07 6.546538839776898 0.6390015349224798 NS(ph)PEDKR ddPTM_A549_PD325901_60min_R1 4 NSPEDKR 7 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 NS(1)PEDKR;NS(1)PEDKR;NS(1)PEDKR;NS(1)PEDKR 89.82700000000001 0.0052731 250851000.0 29381.9 21796.6 21607.699999999997 19049.9 20976.3 12037.57 10255.05 12491.48 16427.3 21278.8 29602.1 True False 32364.728858188435 23633.47597717434 23074.128459655538 20226.56905753807 19502.997052306506 11939.540020963612 10645.31153952868 12242.327632023509 15736.917708474562 19935.25293653727 25961.22936317278 1.2466562505741472 0.9103373205700164 0.888791826337287 0.7791067508625151 0.7512354973440672 0.45989886896112897 0.41004651168906325 0.4715619380255476 0.606169973244723 0.7678855518612827 1.0 14.66407108161373 -3.307898175795368 9.583002918306677 0.7696315165483314 1.0735404990214292 0.0 0.24417795638280942 0.0 0.0 0.035865748184829675 0.0 0.0004921549122526268 3.307898175795368 0.30390898247309783 NS(ph)PEDLGLSLTGDSCK ddPTM_A549_MK2206_60min_R1 2 NSPEDLGLSLTGDSCK 16 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK 187.39 3.2113e-34 20842000.0 2384.8 3184.1 2918.4 2727.0 5442.5 4929.1 3944.1000000000004 3636.7000000000003 5651.3 4020.4 4211.299999999999 True False 2787.29593723788 3346.157089609289 3332.2730036519147 3395.115122419683 4641.915459636153 5450.694090328229 4660.691916742672 4152.213361926654 4371.28957327168 3112.1888477109355 3165.517984032815 0.8805181178237734 1.0570646278074032 1.0526785886102143 1.0725306694022838 1.4663999645714958 1.7218964219511839 1.4723315237037546 1.3117010811092618 1.3809081468880908 0.983153109035906 1.0 11.628225876527733 -6.580135003938479 9.131531672014308 1.2746182571714333 1.0126256567563425 0.3348044654279062 0.2067089977450814 0.4018450393450807 60.05558861835615 0.03503679378973469 0.07306164559836856 2.6294504789718597e-07 6.580135003938479 -0.26199260041509076 NS(ph)PEDLGLSLTGDSCK ddPTM_A549_PD325901_60min_R1 2 NSPEDLGLSLTGDSCK 16 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK 289.61 4.425699999999999e-124 39985000.0 8885.6 9494.5 11562.0 9430.2 10852.1 8608.8 10090.2 10225.4 7637.8 9196.4 10488.2 True False 9787.659570767004 10294.634835950643 12346.666847954084 10012.68203646189 10089.885933712587 8538.692787038546 10474.188082569302 10021.446375328878 7316.809827164965 8615.737734532557 9198.217890177677 1.0640821610910915 1.1191988446961858 1.3422890167820964 1.0885458635584118 1.096939217376779 0.9282985996838142 1.1387192831944295 1.0894986936578537 0.7954595025388804 0.9366746730073526 1.0 13.1671386577828 -7.790503658430716 0.8112444332911395 0.911437994286634 1.1570410969113996 0.35067895471821875 0.1081810183652831 0.44098257893734144 0.5852465411232968 0.02475588768781871 0.04409805168572512 1.619930347799082e-08 7.790503658430716 0.2456031026247656 NS(ph)PFKR ddPTM_A549_MK2206_60min_R1 1 NSPFKR 6 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 NS(1)PFKR 56.729 0.031498000000000005 20009000.0 2378.5 2824.4 3131.0 2748.4 4161.7 3934.8 3603.2 3883.4 4870.4 4429.0 4036.5 True False 2779.932651258092 2968.149896012212 3575.0228804941567 3421.7581233803644 3549.5194429706557 4351.177924291148 4257.854799423746 4433.883842413717 3767.2621764306264 3428.4858239259097 3034.1256482673894 0.916221993919582 0.9782554317442812 1.1782712039416172 1.127757555239787 1.169865672833153 1.4340796752355491 1.403321843924017 1.4613382425166364 1.2416302464539952 1.1299748993202428 1.0 11.567065115922318 -5.7002863572023506 2.8508946540768574 1.1890425157555788 0.920770496764984 0.343148805397838 0.14354394680121677 0.31862054045192434 4.999203238702094 0.02531894015220617 0.1269678393827319 1.9939471487995534e-06 5.7002863572023506 -0.26827201899059483 NS(ph)PFKR ddPTM_A549_PD325901_60min_R1 2 NSPFKR 6 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 NS(1)PFKR;NS(1)PFKR 61.678999999999995 0.026021 43270000.0 7397.799999999999 7396.9 8900.0 8440.7 10525.9 9368.6 9256.5 9023.400000000001 9402.3 8853.2 7778.9 True False 8148.819210027476 8020.262722422812 9504.007520047682 8962.062868779447 9786.59709638368 9292.305227749432 9608.761172851155 8843.42120827964 9007.154028379005 8294.207441103434 6822.144614509939 1.194465915116465 1.1756219159242989 1.393111412477789 1.3136723677358204 1.4345338085576027 1.3620797788404744 1.4084663571062968 1.2962816984956127 1.320281896285487 1.215777136043493 1.0 12.736009621909654 -10.535464817480966 0.7169647667859671 0.9859395658121028 1.328317735070477 0.3438979110430668 0.0987723643209974 0.3475389287009532 0.30171412057930785 0.06822869585380273 0.016490270636079128 2.914306215322491e-11 10.535464817480966 0.34237816925837405 NS(ph)PFTR ddPTM_A549_MK2206_60min_R1 2 NSPFTR 6 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 NS(1)PFTR;NS(0.975)PFT(0.025)R 90.135 0.023493 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NS(ph)PFTR ddPTM_A549_PD325901_60min_R1 1 NSPFTR 6 0 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 NS(0.981)PFT(0.019)R 65.404 0.057362 27144000.0 4852.8 5438.8 5058.2 5351.0 6484.6 4770.8 4992.2 4927.6 6160.9 5047.9 5715.0 True False 5345.452683557459 5897.146763470259 5401.479869427549 5681.519116997267 6029.144066655547 4731.948186553696 5182.180902836663 4829.31515237258 5901.9787981068675 4729.1747325199985 5012.091230369887 1.0665114495856793 1.1765840828549836 1.0776898546255962 1.133562590116297 1.2029198571093453 0.9441065553398723 1.033935869210869 0.9635329706510912 1.1775481584103784 0.9435532026760396 1.0 12.291196959578116 -7.232007420405928 24.91837642626694 1.0628762638990288 1.131091096024696 0.24976263202780258 0.08000640452965799 1156.47625331028 979123.3718084701 0.012716680142277245 0.022024108404832626 5.8612814977487116e-08 7.232007420405928 0.06821483212566726 NS(ph)PGSQVASNPR ddPTM_A549_MK2206_60min_R1 2 NSPGSQVASNPR 12 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 NS(0.996)PGS(0.004)QVASNPR;NS(0.999)PGS(0.001)QVASNPR 119.65 1.6876e-05 603890000.0 1776.9399999999998 2207.1400000000003 2526.01 2465.12 3873.3999999999996 2763.19 2608.11 2751.05 3731.8 3605.8 3494.1000000000004 True False 2076.844029988039 2319.4739985428364 2884.2362013277057 3069.0745106634417 3303.627991061954 3055.588931742926 3081.969827077339 3141.0197622372816 2886.553258460046 2791.247275663138 2626.4185377458416 0.7907513597472997 0.8831319019449031 1.0981632058548976 1.1685397687215213 1.2578452152935748 1.1634051800309884 1.1734496169534654 1.1959326806050887 1.0990454175431874 1.0627579860362861 1.0 11.358881122528906 -5.668841125144368 3.4762371936564787 1.0989861007636323 0.8082427225647294 0.6922725746039688 0.07449913316705199 0.13513086138639205 3.0810794304635207 0.013517754437601991 0.06287716605974655 2.1436746629240466e-06 5.668841125144368 -0.29074337819890295 NS(ph)PGSQVASNPR ddPTM_A549_PD325901_60min_R1 5 NSPGSQVASNPR 12 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 NS(1)PGSQVASNPR;NS(0.996)PGS(0.004)QVASNPR;NS(1)PGSQVASNPR;NS(1)PGSQVASNPR;NS(0.972)PGS(0.027)QVASNPR 187.08 2.3642e-19 798126800.0 11062.369999999999 9590.1 10886.3 10908.44 13085.299999999997 10551.6 11404.42 12663.9 12289.210000000001 11932.0 12386.880000000003 True False 12185.41365871362 10398.29138345888 11625.109782639902 11582.229563935267 12166.233669834337 10465.671267971828 11838.42144383808 12411.308579862642 11772.737240578965 11178.611483672146 10863.372286901866 1.121697143105899 0.9571881648570821 1.0701198003364456 1.0661725712834254 1.1199315781990968 0.963390648094648 1.0897556606903591 1.1424913233275773 1.083709269061278 1.02901853940423 1.0 13.407184404088513 -10.793585660566128 1.1295660272794412 1.0012907360713976 1.0669549343425762 0.11053307835766468 0.057035176759640954 0.6969288030358094 1.625952495558249 0.0342361833179814 0.009300061935422271 1.6084750897775544e-11 10.793585660566128 0.06566419827117853 NS(ph)PPFLK ddPTM_A549_MK2206_60min_R1 2 NSPPFLK 7 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 NS(1)PPFLK;NS(1)PPFLK 61.78 0.027775 22684000.0 3526.7 4880.8 5488.799999999999 4308.8 6667.5 5657.5 5861.1 5995.299999999999 8518.1 6670.9 6447.9 True False 4121.920740463277 5129.211872417646 6267.194374467044 5364.456193429381 5686.719582383843 6256.172894855436 6925.986002692745 6845.152134836216 6588.763950610565 5163.93905685874 4846.708477013082 0.8504577405496285 1.058287680545347 1.2930825949592446 1.1068246045479868 1.1733157893351243 1.290808581644047 1.429008168232366 1.4123300725226886 1.3594306284068218 1.065452787463949 1.0 12.24278959361247 -5.435851680256317 2.849308609059158 1.216579705957238 0.8412784862963378 0.42141191045159465 0.13514988295575653 0.30135459157031774 4.033510996741726 0.023458804195432423 0.21152300257719314 3.6656274135206562e-06 5.435851680256317 -0.37530121966090024 NS(ph)PPFLK ddPTM_A549_PD325901_60min_R1 3 NSPPFLK 7 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 NS(1)PPFLK;NS(1)PPFLK;NS(1)PPFLK 68.626 0.022628 26932700.0 8672.4 8453.6 9615.3 10514.0 12302.9 10358.8 10504.2 10782.3 11318.599999999999 9384.5 11012.0 True False 9552.81566371655 9166.014539911776 10267.852079496015 11163.425900973507 11438.786746700884 10274.44136724919 10903.943079118799 10567.238567949284 10842.91860349176 8791.961068431207 9657.593810819448 0.9891506984912211 0.949099197943389 1.0631894735511542 1.155922077450293 1.18443444306862 1.0638717643869724 1.1290538091282178 1.0941895854131654 1.1227350016879347 0.9103676589277891 1.0 13.237448071071835 -5.8336605184675605 5.568135206541088 1.082277615756312 0.9694556827523056 0.2626739526400407 0.0722566459976403 0.1677557145982244 9.157801655500995 0.00897474718686111 0.02934870538576039 1.4666938857546126e-06 5.8336605184675605 -0.11282193300400645 NS(ph)PQALR ddPTM_A549_MK2206_60min_R1 4 NSPQALR 7 0 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 NS(1)PQALR;NS(1)PQALR;NS(1)PQALR;NS(1)PQALR 115.78 0.0072134 387774000.0 10691.199999999999 12968.800000000001 13618.3 12830.199999999999 18287.8 15102.9 15492.900000000001 17458.100000000002 21897.8 16393.4 14744.8 True False 12495.613185255623 13628.856525776502 15549.579716842407 15973.59957596956 15597.688845702161 16701.07885350636 18307.75938665411 19932.839138188938 16937.98326360104 12690.119554289226 11083.259224222224 1.1274312846483578 1.2296794877801767 1.402978979582029 1.441236666292132 1.4073196818868723 1.5068743332292103 1.6518389596665661 1.7984636770586533 1.5282493101472754 1.1449808488242559 1.0 13.43609457277705 -10.68002113521252 1.0321554747931247 1.009813434065806 1.4614951929515223 0.4011347393104774 0.17736233529312873 0.3757710454677989 0.7347844008699599 0.1172322858560738 0.03377248723731122 2.089194456425468e-11 10.68002113521252 0.45168175888571627 NS(ph)PQALR ddPTM_A549_PD325901_60min_R1 4 NSPQALR 7 0 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 NS(1)PQALR;NS(1)PQALR;NS(1)PQALR;NS(1)PQALR 99.568 0.011101999999999999 325132000.0 8754.5 9548.9 9391.1 10572.6 12081.4 10173.5 10180.9 10702.5 10703.3 11083.900000000001 9694.4 True False 9643.250395277724 10353.619314867457 10028.436519271892 11225.64548988325 11232.844142567354 10090.65038901318 10568.33972070224 10489.030241551176 10253.47752272837 10384.060662409795 8502.050257864883 1.1342264633589016 1.2177791239577498 1.1795315500511203 1.3203456989093763 1.3211923949962927 1.1868490638100795 1.2430342564637185 1.2337059795486651 1.206000577712807 1.2213595953286613 1.0 13.053595071815854 -10.4037184199702 0.6140499096957419 0.9853445032243691 1.2349923503882667 0.01588905407782193 0.0832743943502734 0.380521050171101 0.24256188203635543 0.04928109792480302 0.012069603915880016 3.947131361198945e-11 10.4037184199702 0.24964784716389765 NS(ph)PQALRR ddPTM_A549_MK2206_60min_R1 2 NSPQALRR 8 1 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 NS(1)PQALRR;NS(1)PQALRR 58.82899999999999 0.011086 22737300.0 2054.89 2822.81 3053.33 2870.17 4143.9 2450.8599999999997 2980.36 2684.35 4501.2 3856.4 4398.7 True False 2401.705194762977 2966.4789718036504 3486.33810657912 3573.3617788468296 3534.3377993911367 2710.2083784507995 3521.8528335952888 3064.8648329770976 3481.6853869393744 2985.236561613879 3306.38139205593 0.7263848025921719 0.8971980603723014 1.0544270890695073 1.080747002578819 1.0689443776458776 0.819690186063373 1.0651683565776957 0.9269544161907299 1.053019895195587 0.9028712080180318 1.0 11.691037434183956 -5.42200794090447 2.7599352942354445 1.0158575160386834 0.7153860249802666 0.4775202688303871 0.08129130840588664 0.1676648907962912 2.0470282686944614 0.00973008492699879 0.09443462708758468 3.7843566510594546e-06 5.42200794090447 -0.30047149105841675 NS(ph)PQALRR ddPTM_A549_PD325901_60min_R1 1 NSPQALRR 8 1 Q7L7X3;Q7L7X3-3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 NS(1)PQALRR 63.073 0.004209 7186900.0 1313.8 1060.3 1209.4 1331.9 1338.7 1502.4 1422.2 1519.1 1384.8 1637.6 1467.1 True False 1447.1760088315589 1149.6552021231741 1291.4771567129962 1414.1684380356305 1244.674330264285 1490.1649525191328 1476.3225992577018 1488.8003587891048 1326.60167177172 1534.2016565254364 1286.6560007131518 1.124757517183642 0.8935218127346839 1.0037470434966085 1.0991037520920919 0.9673714882411477 1.1581688902808385 1.1474104954544369 1.1571083164139528 1.031046115695592 1.192394591619732 1.0 10.329410672018208 -4.931943275329428 21.180432392319965 1.0362017342633811 3.57306039562064 0.0 0.09424352727669644 1106.7133037596875 401109.0203323978 0.011265798936631703 21745.781678097803 1.1696521532654299e-05 4.931943275329428 2.5368586613572592 NS(ph)PQPLR ddPTM_A549_MK2206_60min_R1 2 NSPQPLR 7 0 Q9UL54-2 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 NS(1)PQPLR;NS(1)PQPLR 53.327 0.045165 8037900.0 1299.98 1483.29 1377.9699999999998 1540.9 1840.13 1529.75 1573.2 1483.1 2528.3 2018.88 2041.06 True False 1519.3848425404644 1558.783125356164 1573.3868663796006 1918.4205691736302 1569.449314605471 1691.6271296341322 1859.0300761693582 1693.3339668032602 1955.644086865462 1562.8136058269447 1534.2084716097218 0.9903379303767603 1.0160178060551692 1.025536552231896 1.2504301759986929 1.0229700484959348 1.102605780724991 1.211719339692361 1.1037183004383888 1.274692535632763 1.0186448808923665 1.0 10.58327881738726 -6.033885270456066 22.973569097208994 1.1333754850001274 1.0075776190739374 0.24107398855904005 0.087980539119412 259.9341722319519 176230.99318767537 0.014719105174112882 0.038982962554340306 9.249424879200769e-07 6.033885270456066 -0.12579786592619002 NS(ph)PQPLR ddPTM_A549_PD325901_60min_R1 1 NSPQPLR 7 0 Q9UL54-2 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 NS(1)PQPLR 55.06399999999999 0.040944 3822100.0 1143.7 896.28 825.62 1083.0 1031.1 825.04 911.83 802.82 1006.0 1029.0 971.38 True False 1259.8075820525594 971.812661094933 881.6515380563787 1149.8944503285431 958.6790931018922 818.3211477811407 946.5301896225217 786.807125299894 963.7213184592358 964.0287643897617 851.9064180851617 1.4788098261828349 1.1407504867486333 1.0349159477376346 1.3497896317217237 1.1253338075052006 0.9605763384439444 1.1110729647395388 0.9235839859833525 1.1312525624884968 1.1316134541592238 1.0 9.734551148888261 -2.0000000000000004 0.6624256152487041 1.0595786952479382 37.64375442583212 0.4988147733641296 0.11041245705944137 133.35608331153256 0.7583464711672254 0.017789224851511562 7188.822652802293 0.00999999999999999 2.0000000000000004 36.584175730584185 NS(ph)PQS(ph)SPTSTPK ddPTM_A549_MK2206_60min_R1 1 NSPQSSPTSTPK 12 0 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 2 NS(1)PQS(0.654)S(0.321)PT(0.023)S(0.002)TPK 109.22 0.0001173 2836900.0 827.12 790.2 824.2 1199.0 1337.2 981.66 936.04 880.44 1015.6 1132.5 1246.7 True False 966.7176348575124 830.4178047829093 941.0839534025174 1492.755053825155 1140.4996513781289 1085.5386096268298 1106.1063517019877 1005.2450662344166 785.5682215799409 876.6674634445912 937.109982830411 1.031594639444215 0.8861476454180408 1.0042406661383583 1.5929347474418052 1.2170392720963312 1.1583897616244687 1.180337817297759 1.0727076700199192 0.8382881795872463 0.9355011466175385 1.0 9.872074567832605 -8.570824719218257 5.0642081095748015 0.9240252915192831 1.1550153033862696 0.25459554980075283 0.1705785740035594 0.2089645038621668 12.001955943122606 0.03131439889404809 0.03578735781043165 2.6864284665036314e-09 8.570824719218257 0.23099001186698642 NS(ph)PQSS(ph)PTSTPK ddPTM_A549_MK2206_60min_R1 1 NSPQSSPTSTPK 12 0 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 2 NS(0.992)PQS(0.126)S(0.762)PT(0.105)S(0.013)T(0.002)PK 65.805 0.0065422 3153700.0 825.64 1045.8 1359.9 1253.6 1010.2 1040.2 793.55 864.27 1298.6 1202.3 1141.8 True False 964.9878470400378 1099.0267530270398 1552.7542686630472 1560.732056276243 861.6009182038482 1150.2732735711222 937.7277631224217 986.7829192158678 1004.4691734380768 930.6995949663858 858.2595479231284 1.124354339401382 1.2805295970042343 1.8091896238387348 1.818484932737425 1.0038931932523274 1.3402394140031735 1.0925922879525147 1.1497488395016968 1.1703559556881784 1.0844034269336735 1.0 9.745270191668562 -6.780557496000942 24.999979377379038 1.1040078409433256 1.513385418784377 0.44793310960915367 0.20666356113455586 164.35070766257837 214914.44155101417 0.031105242568970192 0.05884828536671079 1.657457892409765e-07 6.780557496000942 0.40937757784105133 NS(ph)PSAASTSSNDSK ddPTM_A549_MK2206_60min_R1 2 NSPSAASTSSNDSK 14 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 NS(0.986)PS(0.014)AASTSSNDSK;NS(0.998)PS(0.002)AASTSSNDSK 148.03 3.0428000000000004e-13 11994800.0 1260.6 1472.75 1615.08 1531.98 2128.2 2019.83 1982.88 2039.03 2294.01 2227.1 2009.4299999999998 True False 1473.3584612890268 1547.7066843761452 1844.1226297759492 1907.3151687731945 1815.1445992094925 2233.567069945358 2343.143629185545 2328.068746767483 1774.4203977812126 1723.996563211874 1510.4330735533106 0.9754543164384865 1.0246774329001866 1.2209230995171672 1.2627604639815087 1.2017378531968614 1.478759376402469 1.5513058275884237 1.5413253241937264 1.1747759161595084 1.141392222798825 1.0 10.560746545131881 -9.508209764797956 1.5794370421733832 1.0464214387586068 1.2811857945309968 0.14889973292663783 0.18337013662324292 0.39790691474957335 2.0199468015550015 0.047218843800642805 0.03789383697668303 3.103060443894723e-10 9.508209764797956 0.23476435577238997 NS(ph)PSAASTSSNDSK ddPTM_A549_PD325901_60min_R1 2 NSPSAASTSSNDSK 14 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 NS(0.999)PS(0.001)AASTSSNDSK;NS(1)PSAASTSSNDSK 222.42 7.170499999999999e-47 16290800.0 3315.1 3897.0 4146.2 4574.8 5257.0 3797.8 4477.8 4980.4 4909.3 4660.1 4608.3 True False 3651.6465115523647 4225.413866522687 4427.586065126036 4857.375005875364 4887.766455665454 3766.871975956577 4648.20512934618 4881.062014951784 4702.979193550623 4365.860490702362 4041.5083144205673 0.9035355682735748 1.045504187495031 1.0955281347134433 1.2018718329846534 1.2093916615797473 0.9320460785682275 1.1501164336989853 1.2077327658922763 1.1636693104823888 1.0802552292480678 1.0 11.980678100319642 -5.305380821831929 2.4054855474280505 1.1004337005570524 0.8689977742649212 0.3389891600095888 0.08477457710064545 0.5186089580820599 3.8724540815155386 0.013303482318235903 0.23760686926916605 4.950159335030386e-06 5.305380821831929 -0.23143592629213117 NS(ph)PVPPTKK ddPTM_A549_MK2206_60min_R1 2 NSPVPPTKK 9 1 K7EM05;Q8NC06-2 K7EM05 ACBD4 Acyl-CoA-binding domain-containing protein 4 1 NS(0.999)PVPPT(0.001)KK;NS(0.999)PVPPT(0.001)KK 50.467 0.011742 21856000.0 8312.2 10129.3 10245.8 10105.5 14375.5 10045.3 10414.7 10399.0 15413.3 15203.900000000001 13892.3 True False 9715.096146221356 10644.838104261611 11698.80850493996 12581.347953653132 12260.882993109699 11108.28697846953 12306.916179939633 11873.090095601858 11922.212159982375 11769.328430432863 10442.458502025289 0.9303456790694583 1.0193804554930308 1.1203117065460213 1.2048262342831442 1.1741375836668857 1.0637616588387788 1.1785458546522103 1.1370014152605061 1.1417054860854934 1.1270648983809923 1.0 13.350173789840552 -5.489360513749332 3.094539463253429 1.0989083496581806 0.9340432785261987 0.46784775666448064 0.05963105406341709 0.25480217161993474 4.4607928552803 0.010684626455503079 0.07711460749395606 3.2407049034526886e-06 5.489360513749332 -0.1648650711319819 NS(ph)PVPPTKK ddPTM_A549_PD325901_60min_R1 2 NSPVPPTKK 9 1 K7EM05;Q8NC06-2 K7EM05 ACBD4 Acyl-CoA-binding domain-containing protein 4 1 NS(1)PVPPTKK;NS(0.995)PVPPT(0.005)KK 72.49600000000001 0.0010975 38344000.0 9710.2 9904.1 10419.5 11856.400000000001 14783.3 11578.7 11467.5 11379.0 14053.599999999999 12412.8 11227.3 True False 10695.972355728567 10738.753265441974 11126.629927543465 12588.742900161911 13744.972007616343 11484.406906105754 11903.901987756777 11152.036918347194 13462.976064710458 11629.053689618295 9846.413275718598 1.0862810707026684 1.0906258923667056 1.1300185779304937 1.2785105141997177 1.3959369389371101 1.1663543449294855 1.2089581916200873 1.1325989074466623 1.367297480587206 1.1810446468152738 1.0 13.265382578603852 -6.026679585827107 9.984058849330074 1.1977850658468256 1.0938098082323433 0.18287772813094494 0.10416048476668716 0.9633477897022112 357.63089835793573 0.020046096258466362 0.05453285293090381 9.404168762909711e-07 6.026679585827107 -0.10397525761448234 NS(ph)PVT(ph)KTPPRDLPTIPGVTSPSSDEPPMEASQSHLR ddPTM_A549_MK2206_60min_R1 2 NSPVTKTPPRDLPTIPGVTSPSSDEPPMEASQSHLR 36 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 NS(0.918)PVT(0.562)KT(0.487)PPRDLPT(0.027)IPGVT(0.002)S(0.002)PS(0.001)S(0.001)DEPPMEASQSHLR;NS(0.758)PVT(0.433)KT(0.408)PPRDLPT(0.363)IPGVT(0.015)S(0.015)PS(0.004)S(0.004)DEPPMEASQSHLR 54.888000000000005 0.0013076 7482000.0 2092.0 1783.0500000000002 2353.8 1906.85 2798.2 2365.8999999999996 2671.3999999999996 2679.5 3116.5 2824.6 2745.7 True False 2445.0784555105856 1873.7996289776836 2687.60423382534 2374.0283356017485 2386.5884867531267 2616.2579676426826 3156.7588008383063 3059.327330624597 2410.6177260278505 2186.5208982301037 2063.8669125350607 1.184707425008951 0.9079071996343425 1.3022178016915533 1.1502816975178476 1.1563674344784496 1.2676485832262878 1.5295360285420923 1.482327814862251 1.1680102585039622 1.059429212683286 1.0 11.011134226927032 -9.759939246840764 1.3021901282520845 1.034135527718277 1.239133466092949 0.19999751818719558 0.1604615385330985 0.45661927317657525 1.5669014445849951 0.04752518795342089 0.03256624104438968 1.738043945527859e-10 9.759939246840764 0.20499793837467184 NS(ph)PVT(ph)KTPPRDLPTIPGVTSPSSDEPPMEASQSHLR ddPTM_A549_PD325901_60min_R1 2 NSPVTKTPPRDLPTIPGVTSPSSDEPPMEASQSHLR 36 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 NS(0.961)PVT(0.484)KT(0.485)PPRDLPT(0.069)IPGVTSPSSDEPPMEASQSHLR;NS(0.968)PVT(0.539)KT(0.47)PPRDLPT(0.023)IPGVTSPSSDEPPMEASQSHLR 82.47200000000001 2.7099e-06 18703300.0 2385.5 2252.2 2163.36 2757.9 3299.5 2962.1000000000004 2759.5 3027.9 3018.3 2547.44 2885.0 True False 2627.674203887715 2442.0007980965884 2310.17861894049 2928.2492193546536 3067.7545026570588 2937.9776396811267 2864.514282556341 2967.5061591584 2891.451347420986 2386.594203651169 2530.1632895218067 1.0385393760038062 0.9651554143598847 0.9130551488544864 1.1573360626491755 1.2124729322259888 1.161181039914778 1.1321460138241615 1.172851638251083 1.142792387904522 0.9432569880113265 1.0 11.30501478000912 -6.262485434316947 24.99906832756118 1.1028013871037063 0.9715405225429564 0.3834341304125727 0.07962993468366149 83.8342187050453 2003545.4900678042 0.011839276132506673 0.02903585669021577 5.464048752972167e-07 6.262485434316947 -0.13126086456074992 NS(ph)PVTK ddPTM_A549_MK2206_60min_R1 1 NSPVTK 6 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 NS(1)PVTK 83.948 0.040794 41157000.0 4405.9 5066.2 4311.5 3123.1 4459.2 5939.3 5115.4 5941.0 3485.0 5352.0 5049.2 True False 5149.508206087039 5324.0479405102205 4922.9355315396215 3888.259640201284 3803.257587066518 6567.792783811734 6044.801965189889 6783.154943549435 2695.6530644014288 4142.979482874569 3795.3442891692584 1.3567960674298105 1.40278392021072 1.2970985387513223 1.0244814024638496 1.0020850013317215 1.7304866919594588 1.5926887008485342 1.7872304662600615 0.7102525776367616 1.0915951669252653 1.0 11.890015048233668 -8.77916946083356 24.999976359516534 0.8631747978349655 1.3876859365611662 0.3933921190543572 0.2528835522858341 161.1999762696941 227296.17128146652 0.046899327973243546 0.04997996692496516 1.6627637167133227e-09 8.77916946083356 0.5245111387262007 NS(ph)PVTK ddPTM_A549_PD325901_60min_R1 1 NSPVTK 6 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 NS(0.994)PVT(0.006)K 78.264 0.044133 51067000.0 14580.0 9624.0 7807.0 9816.5 10597.0 6477.2 5242.7 6264.8 7939.8 10057.0 14993.0 True False 16060.150866771295 10435.048255430933 8336.82996730475 10422.842910110945 9852.703277665358 6424.451830708815 5442.213817415516 6139.8436493594745 7606.117817398258 9421.999303661636 13148.956048457689 1.2214012129620797 0.793602793786425 0.6340297995202913 0.7926745569534013 0.7493144886449775 0.4885902581948605 0.4138894218947414 0.46694533214137934 0.5784579239117937 0.7165587343161584 1.0 13.682660641918782 -5.274872509404457 3.5100617824440237 0.715816884795265 1.2752285884656547 0.450649273543962 0.17015084587685916 0.2706774869841206 5.825957610806519 0.030977957904527096 0.3918619341922071 5.310403124544188e-06 5.274872509404457 0.5594117036703897 NS(ph)PVTKT(ph)PPR ddPTM_A549_MK2206_60min_R1 1 NSPVTKTPPR 10 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 NS(0.995)PVT(0.006)KT(0.999)PPR 89.471 0.00036321 86840000.0 1444.2 2723.4 2722.6 3959.5 5935.8 5970.6 5593.2 7910.4 7243.9 4448.0 4085.7 True False 1687.9456526999934 2862.009427418092 3108.70561942938 4929.577677748711 5062.651683106711 6602.404929036477 6609.412040446511 9031.723424583994 5603.168216131283 3443.193710729835 3071.107930416469 0.5496210784331156 0.93191430983996 1.0122423860915277 1.6051463476505747 1.6484772915226626 2.1498446419436434 2.1521262652433766 2.940868126168139 1.8244777920818447 1.1211568556833194 1.0 11.584543499659182 -6.051561521571925 1.7877929721701582 1.6514113040572582 0.6834588413149509 0.3960548719125978 0.5187951250871222 0.41106960758046657 2.459100071430845 0.0911521616086048 0.39628685127428653 8.880521671334349e-07 6.051561521571925 -0.9679524627423073 NS(ph)PVTKTPPRDLPT(ph)IPGVTSPSSDEPPMEASQSHLR ddPTM_A549_PD325901_60min_R1 1 NSPVTKTPPRDLPTIPGVTSPSSDEPPMEASQSHLR 36 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 NS(0.817)PVT(0.309)KT(0.289)PPRDLPT(0.531)IPGVT(0.021)S(0.021)PS(0.006)S(0.006)DEPPMEASQSHLR 50.567 0.0027295 4730700.0 1112.2 1185.9 957.4 1129.7 1583.4 1327.1 1178.8 1253.2 1335.7 1458.8 1363.1 True False 1225.109725241635 1285.8399549164117 1022.374921313893 1199.479003265148 1472.1874464334558 1316.2925375986022 1223.6598790641106 1228.2039428836192 1279.5651740218702 1366.691119039634 1195.4473414028323 1.0248127900004316 1.075614048718788 0.8552237191093315 1.0033725131360323 1.2314950190159566 1.1010878455373538 1.0235999836079532 1.0274011245383237 1.0703651509403396 1.1432466087848343 1.0 10.223334866430417 -6.538337314590367 24.99995655113683 1.0519311231786443 0.9834300958627316 0.17467764833577992 0.08206782492594196 372.6438469743273 602646.5338173639 0.011544734579750337 0.02403868530985257 2.895094107531083e-07 6.538337314590367 -0.06850102731591279 NS(ph)PYRR ddPTM_A549_MK2206_60min_R1 2 NSPYRR 6 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;Q9UQ88-9;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 NS(0.999)PY(0.001)RR;NS(1)PYRR 55.676 0.032995 108264000.0 1735.52 2197.65 1825.79 1847.51 3486.0 2892.0 2635.13 2915.61 3504.7400000000002 2646.76 2622.7 True False 2028.4333466098133 2309.500998077904 2084.7144761984737 2300.1500329378746 2973.2140178762766 3198.0295204457657 3113.899011324791 3328.9066461811426 2710.921985919732 2048.8550777453456 1971.4112071623647 1.0289245283988853 1.1714963320119214 1.057473178921001 1.1667530470462801 1.5081653219147007 1.622203175485132 1.579527903672068 1.6885907080607232 1.375117467157861 1.0392834687667487 1.0 10.9450130172375 -6.535546264922489 23.869773003117395 1.3057929048602417 1.0974503294658227 0.23007836586154284 0.2223131096313501 236.6925977695959 446005.8667114077 0.03993933980708806 0.0831923823813694 2.913759718558505e-07 6.535546264922489 -0.20834257539441903 NS(ph)PYRR ddPTM_A549_PD325901_60min_R1 2 NSPYRR 6 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;Q9UQ88-9;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 NS(1)PYRR;NS(1)PYRR 61.998999999999995 0.025845999999999997 97923000.0 3422.5 3242.14 4187.5 3893.3999999999996 5154.7 3307.5 3458.1 3900.5 4297.200000000001 4141.0 4202.0 True False 3769.9496804886653 3515.3665160913215 4471.688931483109 4133.886475447047 4792.651654749614 3280.56481659813 3589.699887844927 3822.701467616944 4116.603627915539 3879.536553292521 3685.180638672661 1.0230026829421681 0.953919728981724 1.2134246241708613 1.1217595230110624 1.3005201439666318 0.8902046163413398 0.9740906185640538 1.0373172559035844 1.1170696993019773 1.0527398609935885 1.0 11.84751962314932 -7.277475887039193 24.985832802509638 1.037989590821624 1.118165799379 0.20646806545396135 0.10100020217639107 1401.6747327624855 2183887.4832458333 0.01603771247242224 0.025686340091387296 5.278665142486332e-08 7.277475887039193 0.08017620855737606 NS(ph)QDITPVDNSMDSNIHQR ddPTM_A549_PD325901_60min_R1 1 NSQDITPVDNSMDSNIHQR 19 0 Q59FP8;Q92859-4;Q92859;Q92859-3;Q92859-2 Q59FP8 NEO1 Neogenin 1 NS(0.954)QDIT(0.046)PVDNSMDSNIHQR 66.613 0.00043215 5105300.0 1516.8 1249.5 1499.6 2361.0 1470.9 4003.6 1871.5 1822.4 1932.5 1769.7 1857.8 True False 1670.7844193908566 1354.7997501206319 1601.3718738273599 2506.833607779956 1367.5890583295254 3970.9960089893507 1942.7209566240965 1786.0508023548568 1851.2837454497756 1657.9608399811084 1629.3023775645092 1.025460002021451 0.8315213730589374 0.982857384779061 1.5385932300222782 0.8393709339415595 2.437236981710675 1.1923636664227344 1.0962058528538183 1.1362431988941706 1.0175894068597862 1.0 10.67003865901671 -4.075904480317373 16.362305712105254 1.1500121285815066 1.1228604488064902 0.0 0.4363327666854293 0.0 0.0 0.05444431979809608 0.0 8.396446394991284e-05 4.075904480317373 -0.027151679775016424 NS(ph)SDSAIDNPKPNKLPK ddPTM_A549_MK2206_60min_R1 1 NSSDSAIDNPKPNKLPK 17 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 NS(0.499)S(0.499)DS(0.001)AIDNPKPNKLPK 63.578 0.0012178 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NS(ph)SDSAIDNPKPNKLPK ddPTM_A549_PD325901_60min_R1 2 NSSDSAIDNPKPNKLPK 17 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 NS(0.333)S(0.333)DS(0.333)AIDNPKPNKLPK;NS(0.484)S(0.484)DS(0.032)AIDNPKPNKLPK 60.635 0.00073695 43660000.0 4072.3 4111.9 4501.6 3675.7000000000003 4754.0 5289.7 4517.4 5178.8 5722.6 4600.2 4864.700000000001 True False 4485.716898131189 4458.424243714305 4807.105646319849 3902.7396408796208 4420.095440409658 5246.622436994444 4689.312129016132 5075.504771309995 5482.09902287756 4309.742586924955 4266.37273987408 1.0514123288401618 1.0450151722668968 1.1267430061588404 0.9147676208419633 1.0360312400974405 1.2297618508478692 1.0991332485296477 1.1896533849172766 1.2849554779030772 1.0101655081951781 1.0 12.05879429967869 -7.18270271966709 11.580763878652277 1.1452769783232173 1.033704951398506 0.22533556015477985 0.09212382446170948 1.1826093135732723 171.36707087026008 0.016687886014680457 0.028913241187541124 6.565945601964144e-08 7.18270271966709 -0.11157202692471135 NS(ph)SEASSGDFLDLK ddPTM_A549_MK2206_60min_R1 1 NSSEASSGDFLDLK 14 0 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 NS(0.755)S(0.245)EASSGDFLDLK 255.2 9.268799999999999e-70 22838000.0 3776.8 5384.1 5914.1 4621.6 6558.9 4766.6 5358.5 5753.5 5804.8 5049.7 5562.0 True False 4414.231506105344 5658.1276926495375 6752.80830965522 5753.892207471511 5594.09449852229 5270.998448186994 6332.070088452523 6569.076244354772 4490.022068360812 3908.969262831039 4180.801896609247 1.0558336929777552 1.3533594350017983 1.6151945192935226 1.376265211737989 1.3380434272810835 1.2607625471232993 1.5145587485472627 1.5712479105222579 1.0739619286918025 0.9349807428094902 1.0 12.029563968907432 -8.865062065274849 6.950765200589579 1.032669582022992 1.3899866330623778 0.566889641395109 0.14858380308445449 0.11879746408755859 7.084011813524865 0.02550885793354478 0.027083075948214463 1.3643881371600477e-09 8.865062065274849 0.3573170510393857 NS(ph)SEASSGDFLDLK ddPTM_A549_PD325901_60min_R1 2 NSSEASSGDFLDLK 14 0 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 NS(0.958)S(0.042)EASSGDFLDLK;NS(0.783)S(0.203)EAS(0.014)SGDFLDLK 269.09 1.0107e-83 77740000.0 15062.0 15105.199999999999 17330.6 15523.5 19905.1 12667.6 15972.4 14280.8 15808.4 16651.9 17806.0 True False 16591.083151941635 16378.16821570402 18506.758733363862 16482.351338573553 18507.03444486712 12564.4392655294 16580.23842243265 13995.958240929122 15144.027923191845 15600.496192168961 15615.974881533886 1.0624429968545113 1.0488085655844284 1.1851170915527258 1.055480138999466 1.1851347472870204 0.8045888496136754 1.0617485330383707 0.8962590134209003 0.9697779381740601 0.999008791351014 1.0 13.930735016974026 -7.233294734497666 24.998920170378334 0.9729541364102854 1.1055753493598235 0.4898604656915855 0.07614751618722805 501.49768547376385 445445.55148823315 0.010086369570146685 0.01746790615153911 5.843933502538256e-08 7.233294734497666 0.1326212129495381 NS(ph)SEKLPTELSK ddPTM_A549_MK2206_60min_R1 4 NSSEKLPTELSK 12 1 P38432 P38432 COIL Coilin 1 NS(0.9)S(0.1)EKLPTELSK;NS(0.868)S(0.13)EKLPT(0.001)ELSK;NS(0.977)S(0.023)EKLPTELSK;NS(0.798)S(0.202)EKLPTELSK 140.89 3.2245e-12 78165000.0 16956.800000000003 22120.7 20469.2 21976.1 26752.2 23967.9 20866.8 24543.4 28762.5 28786.3 26458.6 True False 19818.693286042977 23246.54914485106 23372.04035305364 27360.24548654462 22816.986818425037 26504.167269395613 24658.02745576581 28022.502111010148 22247.839674274364 22283.454837046385 19888.19939978883 0.9965051580412758 1.168861427701589 1.1751712602651097 1.375702492546164 1.1472625731350674 1.3326579614681975 1.2398320712747692 1.409001466030539 1.1186452441999646 1.1204360127887187 1.0 14.279625045636374 -9.166695882493837 2.4514273335797605 1.0423239254769567 1.232588867676202 0.23992407329587362 0.11495407551206076 0.20852875030330634 2.5976099639673964 0.022188431744592105 0.02103875184301661 6.81246238768425e-10 9.166695882493837 0.19026494219924528 NS(ph)SEKLPTELSK ddPTM_A549_PD325901_60min_R1 2 NSSEKLPTELSK 12 1 P38432 P38432 COIL Coilin 1 NS(0.971)S(0.029)EKLPTELSK;NS(0.988)S(0.012)EKLPTELSK 175.39 1.7166999999999999e-16 131798000.0 21019.2 21337.4 25234.3 24192.0 28792.0 23288.8 24101.0 24016.4 25202.0 23780.8 23784.1 True False 23153.053710482804 23135.57758161181 26946.85134417296 25686.28489598164 26769.74924700775 23099.143734177036 25018.17674357325 23537.374061498682 24142.84758231578 22279.276229543273 20858.806479832077 1.109989381840662 1.1091515520785475 1.2918692816977462 1.2314359846435674 1.283378762485324 1.1074048630975646 1.1994059567963669 1.1284142304237998 1.1574414675000206 1.0680992822424724 1.0 14.348368990192899 -10.46008234888963 0.4239654026747741 0.9616726384444069 1.1967948735382117 0.42855478955821336 0.06514043033850771 1.0374203597443505 0.27558803954128885 0.10475135915088335 0.01936433091128656 3.4667111006459506e-11 10.46008234888963 0.2351222350938048 NS(ph)SEKLPTELSKEEPSTK ddPTM_A549_MK2206_60min_R1 1 NSSEKLPTELSKEEPSTK 18 2 P38432 P38432 COIL Coilin 1 NS(0.989)S(0.011)EKLPTELSKEEPSTK 166.06 3.6619e-24 26671000.0 3847.2 4994.1 5242.7 4677.9 6607.0 4730.9 4149.6 4259.6 6903.9 6762.0 7047.6 True False 4496.513304990593 5248.278358474218 5986.193693889076 5823.985709998909 5635.119052239979 5231.520697882738 4903.528606707585 4863.411344477895 5340.177673262853 5234.459503587041 5297.486416135085 0.8488012902298553 0.9907110554335753 1.1300064263791836 1.0993866246188404 1.0637344977566214 0.9875477324394021 0.9256330685006414 0.9180601822148927 1.00805877613914 0.9881024871803207 1.0 12.371092267891967 -7.289275605959553 22.33210436568446 0.9892182028125803 1.0343346531044368 0.09197227811806952 0.07395123071085537 427.58331107282555 343035.6537452066 0.01157224546448514 0.01850441394511749 5.137175397946445e-08 7.289275605959553 0.045116450291856514 NS(ph)SEKLPTELSKEEPSTK ddPTM_A549_PD325901_60min_R1 5 NSSEKLPTELSKEEPSTK 18 2 P38432 P38432 COIL Coilin 1 NS(0.956)S(0.044)EKLPTELSKEEPSTK;NS(0.932)S(0.067)EKLPTELSKEEPSTK;NS(0.983)S(0.017)EKLPTELSKEEPSTK;NS(0.966)S(0.034)EKLPTELSKEEPSTK;NS(0.97)S(0.03)EKLPTELSKEEPSTK 185.28 2.0074000000000002e-40 101421900.0 15388.8 15628.800000000003 16669.1 17074.4 20693.3 20414.5 19158.3 20512.199999999997 20533.3 19099.0 19504.500000000004 True False 16951.059647364196 16945.89382527838 17800.36536544121 18129.046909224086 19239.87399600949 20248.251080405902 19887.379590324028 20103.068079490396 19670.3568074742 17893.085880544273 17105.570149212508 0.9909672404660873 0.9906652439795187 1.0406180682764723 1.0598329521368626 1.1247724471139735 1.1837226648267012 1.1626259409564075 1.1752351955608966 1.1499386828903664 1.046038554953868 1.0 14.062178571216384 -6.136740768238327 1.8282322021377535 1.0986717243037212 0.9900622450525106 0.424458784849744 0.0554619317956455 0.4157935687441457 2.6182935497734796 0.010990746350077402 0.042730488561744856 7.298930557457671e-07 6.136740768238327 -0.10860947925121056 NS(ph)SNKPAVTTKSPAVKPAAAPK ddPTM_A549_MK2206_60min_R1 1 NSSNKPAVTTKSPAVKPAAAPK 22 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(0.246)S(0.246)NKPAVT(0.17)T(0.17)KS(0.17)PAVKPAAAPK 77.235 4.6662e-05 4713700.0 1888.9 2555.4 2243.8 2048.3 3369.2 3346.4 2494.0 2373.0 3131.7 3303.8 3343.5 True False 2207.700140828844 2685.458945004108 2562.004579767737 2550.133591951681 2873.595143152253 3700.5138268394585 2947.1275171411025 2709.3800170077116 2422.3749502972632 2557.4692854112477 2513.216674094395 0.8784360551102741 1.0685345886350124 1.0194125346120118 1.0146891106675426 1.1433933145409023 1.4724213256196428 1.1726515853246364 1.0780526983348946 0.9638544003254852 1.0176079570746914 1.0 11.295319341541655 -8.636135763961397 4.550441347859099 0.9831072937631452 1.1169293327144096 0.11487345685126482 0.13863193621234424 0.3145080988894819 11.231070877082551 0.02500787179836594 0.02834124381312884 2.311342133015436e-09 8.636135763961397 0.13382203895126443 NS(ph)SPEDRYEEQER ddPTM_A549_MK2206_60min_R1 2 NSSPEDRYEEQER 13 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 NS(0.5)S(0.5)PEDRY(0.001)EEQER;NS(0.5)S(0.5)PEDRYEEQER 64.13600000000001 0.0017115 13354900.0 427.84000000000003 480.55999999999995 948.55 828.33 1415.38 1009.5799999999999 1112.33 1077.15 1365.8400000000001 1336.06 1270.75 True False 500.04893231627557 505.0184513622816 1083.068653239454 1031.2708871851462 1207.1794769425485 1116.4130854950333 1314.4259627672657 1229.8393111335263 1056.4794207982925 1034.2431180660303 955.1877040841781 0.5235085524846828 0.528711214772689 1.1338804390053225 1.0796525989349033 1.263813878445993 1.168789213598008 1.3760917955152288 1.2875367908056152 1.106043782055624 1.0827642709844654 1.0 9.89964045500919 -5.760284780666941 24.944309258512565 1.1168994601999074 0.5261096393779454 0.8254637819778905 0.11168622128803822 10.251591314319903 221447.64586906647 0.01881670968960214 0.0655695464282544 1.7366616711572788e-06 5.760284780666941 -0.590789820821962 NS(ph)SPEDRYEEQER ddPTM_A549_PD325901_60min_R1 2 NSSPEDRYEEQER 13 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 NS(0.584)S(0.416)PEDRYEEQER;NS(0.5)S(0.5)PEDRYEEQER 71.594 0.00060333 18717800.0 1639.58 1439.04 1697.81 1653.15 2118.5 2011.3400000000001 2091.0 1959.04 1731.23 2179.27 1714.25 True False 1806.028954604998 1560.3129511113184 1813.0335963609173 1755.2613209239448 1969.7038684282409 1994.9603138976515 2170.574149239104 1919.9654103628504 1658.4724236144968 2041.670520283454 1503.408117526085 1.201289878344469 1.0378505562939704 1.2059490535040696 1.1675215135942552 1.3101591280945477 1.3269585887167046 1.4437690763642181 1.2770753250436255 1.1031418576770597 1.3580281338663382 1.0 10.55402098334214 -8.975119623741264 2.693006196314393 1.0402346394253474 1.2462745809981248 0.0 0.1376897123230476 0.19020171006630673 2.745058338918062 0.021018201316826697 0.021350821211113417 1.0589620004388229e-09 8.975119623741264 0.20603994157277739 NS(ph)SPEDRYEEQERS(ph)PR ddPTM_A549_MK2206_60min_R1 1 NSSPEDRYEEQERSPR 16 2 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 2 NS(0.533)S(0.475)PEDRY(0.002)EEQERS(0.991)PR 48.077 0.007961399999999999 9457200.0 320.7 234.37 223.53 182.16 317.83 296.66 294.49 332.33 546.65 327.91 344.62 True False 374.8263196377841 246.29843192479169 255.22991519541958 226.7892081774732 271.0776280268551 328.0523642930297 347.99502105969634 379.4387952179406 422.83464782067216 253.83490325661447 259.0413429718588 1.4469748934188613 0.9508074236302448 0.9852864113013293 0.875494257308999 1.0464647261202005 1.2664092940896619 1.3433956798838134 1.4647808371622026 1.6323056504019406 0.9799011244478842 1.0 8.017038560043817 -7.325216998705984 3.7878517275328067 1.3234532467563291 1.0392024003701799 0.1835043375258988 0.2220971745981682 0.29720753963267343 8.526258013271889 0.03992153251599141 0.06620851859380829 4.729149042097318e-08 7.325216998705984 -0.2842508463861493 NS(ph)SPEDRYEEQERS(ph)PR ddPTM_A549_PD325901_60min_R1 1 NSSPEDRYEEQERSPR 16 2 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 2 NS(0.538)S(0.462)PEDRYEEQERS(1)PR 68.42 0.0006231 15602000.0 560.89 497.59 483.07 408.72 572.28 715.08 408.22 512.94 501.74 425.79 311.96 True False 617.8311398946055 539.5236555922568 515.8540351358918 433.9657061295312 532.085027058822 709.2566255640181 423.7550354865555 502.70900930635446 480.6536126478503 398.9055467342239 273.59089767737356 2.2582298795012186 1.9720087918585616 1.8854941429528187 1.5861847371884292 1.9448199175334857 2.59239847372552 1.5488637929258156 1.8374478594648413 1.7568333476307798 1.4580366164251015 1.0 8.095876422578364 -10.433356303604437 0.3999442430461086 0.7819461639183078 2.0063997478658884 0.44373361844530235 0.2987211843512229 0.9258145083867799 0.22008396589383877 0.4696028881473499 0.08838585456270844 3.686750063451007e-11 10.433356303604437 1.2244535839475805 NS(ph)SPEKHILENK ddPTM_A549_MK2206_60min_R1 5 NSSPEKHILENK 12 1 E7EVA0;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein 1 NS(0.589)S(0.411)PEKHILENK;NS(0.5)S(0.5)PEKHILENK;NS(0.943)S(0.057)PEKHILENK;NS(0.5)S(0.5)PEKHILENK;NS(0.553)S(0.447)PEKHILENK 91.20700000000001 7.539399999999999e-05 25030000.0 5479.81 7485.400000000001 6585.47 5925.299999999999 8746.6 6985.82 6371.0599999999995 7422.6 12884.7 11267.8 12240.599999999999 True False 6404.667959508347 7866.374887271563 7519.388670970252 7376.998765996821 7459.986726550954 7725.054835587988 7528.599133663582 8474.776280759146 9966.336022637912 8722.396154173028 9200.921196626237 0.6960898612909313 0.8549551418999196 0.8172430249405284 0.801767410930744 0.810786938299869 0.8395958046484069 0.8182440619558988 0.9210791071514283 1.0831889339832987 0.9479916160320259 1.0 13.167562595752615 -8.485282448278587 2.9188494469779 1.0390914052640727 0.8090966217034823 0.7530604071822544 0.05103485522686521 0.07208624430659819 1.2313159042848165 0.007940630685292365 0.00943318280678615 3.271278744056673e-09 8.485282448278587 -0.22999478356059044 NS(ph)SPEKHILENK ddPTM_A549_PD325901_60min_R1 1 NSSPEKHILENK 12 1 E7EVA0;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein 1 NS(0.654)S(0.346)PEKHILENK 121.32 5.530900000000001e-06 18003000.0 2260.8 2703.4 2456.6 2627.4 3446.0 3506.3 3214.1 3069.9 3201.8 3226.7 3628.4 True False 2490.314751687004 2931.2250055831264 2623.31964873586 2789.6885307416596 3203.964848054623 3477.7458553100587 3336.414334323006 3008.668436210041 3067.2394805594245 3022.9656113279316 3182.129802322676 0.782593704967438 0.9211519289513549 0.8243911504870313 0.8766733929915215 1.0068617709170786 1.0928988040562044 1.0484846758569422 0.9454889093505792 0.9638951491924083 0.9499818672140374 1.0 11.63577697053463 -6.695543205579392 4.8690359514993675 0.9946081145899565 0.8511975831160036 0.667215985495476 0.05099240020416726 0.10219996471556339 4.682836170356849 0.007359723614588487 0.015464913836890533 2.015843415467741e-07 6.695543205579392 -0.14341053147395288 NS(ph)SPSDSKPPFSQGQEK ddPTM_A549_MK2206_60min_R1 1 NSSPSDSKPPFSQGQEK 17 1 Q70EL1-7;Q70EL1;Q70EL1-8;Q70EL1-9;Q70EL1-10 Q70EL1-7 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.492)S(0.492)PS(0.016)DSKPPFSQGQEK 63.184 0.0008312999999999999 3611800.0 1286.7 1752.0 1496.8 1504.1 2157.0 1422.3 1280.5 1469.2 1987.2 1965.0 2165.1 True False 1503.8635032052916 1841.1693166029577 1709.0687472129205 1872.6045675216155 1839.708157360621 1572.8068419536708 1513.1502749395268 1677.4635992362971 1537.1023729063186 1521.1051352482295 1627.4459162798769 0.9240635821821482 1.1313244257060313 1.0501539437449463 1.1506401219170088 1.1304266021730216 0.9664264884137571 0.9297699295583262 1.030733852631339 0.9444875295272045 0.9346578709818338 1.0 10.66839388482025 -7.275159411409253 24.462481455990442 0.9737931241621459 1.0828858061850994 0.42522157703629804 0.06310503022111626 416.1961992967872 742066.8695828842 0.008838870074341696 0.014177200236790312 5.306896144301632e-08 7.275159411409253 0.10909268202295352 NS(ph)SPSDSKPPFSQGQEK ddPTM_A549_PD325901_60min_R1 1 NSSPSDSKPPFSQGQEK 17 1 Q70EL1-7;Q70EL1;Q70EL1-8;Q70EL1-9;Q70EL1-10 Q70EL1-7 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.425)S(0.359)PS(0.195)DS(0.021)KPPFSQGQEK 61.136 0.00096713 5469500.0 2540.6 3435.4 3306.3 3284.6 4195.9 3879.7 3717.9 3303.7 3836.7 4423.3 4365.9 True False 2798.51984170913 3724.9132145373505 3530.6854003970407 3487.4822821321645 3901.194459069181 3848.105009510436 3859.3867190129426 3237.805111797486 3675.45684148365 4144.012083114901 3828.9219777203652 0.7308897538244673 0.9728360191750528 0.9221095182772864 0.9108261548354964 1.0188754123926664 1.0050100346524928 1.0079564800405558 0.8456179391059794 0.9599194924499129 1.0822921196169506 1.0 11.902722547226043 -4.702928467034811 1.626825580805013 0.9712435851117511 3.877952017199073e-13 0.5579627853814446 0.06112090561539328 2.745640648467128 1.899643589803333 0.007318895279365124 6.6365397245809845 1.981853431466987e-05 4.702928467034811 -0.9712435851113633 NS(ph)TELAPPLPVR ddPTM_A549_MK2206_60min_R1 3 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.982)T(0.018)ELAPPLPVR;NS(0.995)T(0.005)ELAPPLPVR;NS(0.793)T(0.207)ELAPPLPVR 169.17 1.3128e-15 110438000.0 4572.43 6038.1 4654.84 4342.469999999999 7073.1 4661.219999999999 4808.6 6535.92 7233.799999999999 5686.7 5963.56 True False 5344.144398819435 6345.413499189675 5314.966306304508 5406.375344940882 6032.656359678914 5154.467206532581 5682.260376473419 7462.406675415531 5595.355850004894 4402.070520415326 4482.643466117053 1.1921859142298974 1.4155516822055418 1.1856767879218437 1.20606855883276 1.3457809895607222 1.1498722228287037 1.2676137237823857 1.6647334841197179 1.2482268313994849 0.9820255734566549 1.0 12.13013404166392 -10.149239802438663 1.0000695295760444 1.0246246805063204 1.296357702343284 0.40827714800145476 0.13952094947785082 0.3740390356959755 0.7460277143272587 0.055712261875475205 0.026354213363405675 7.091860717363133e-11 10.149239802438663 0.2717330218369636 NS(ph)TELAPPLPVR ddPTM_A549_PD325901_60min_R1 1 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.987)T(0.013)ELAPPLPVR 161.21 5.045e-14 87353000.0 1658.8 1418.4 1777.0 1460.3 2010.8 1666.4 1687.1 1671.8 1606.2 1939.9 2089.4 True False 1827.2001548559806 1537.9335458752325 1897.5979059690712 1550.4994144180719 1869.568344883412 1652.8293908931596 1751.3035137165439 1638.4546374982706 1538.696999710959 1817.4143829345956 1832.4170457978726 0.9971530002114664 0.8392923157978943 1.0355709745882753 0.8461498532627719 1.0202744780020112 0.9019941146495302 0.9557341314482205 0.8941494193451215 0.8397089533954746 0.9918126373591201 1.0 10.839532173157647 NS(ph)TELAPPLPVRR ddPTM_A549_MK2206_60min_R1 2 NSTELAPPLPVRR 13 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.809)T(0.191)ELAPPLPVRR;NS(0.909)T(0.091)ELAPPLPVRR 85.36200000000001 0.00012787 91829000.0 1383.17 1855.3 1701.3400000000001 1827.71 2812.8 2156.0 1969.6399999999999 2052.06 2907.2 2591.6 2932.8 True False 1616.615280740236 1949.7268453729837 1942.6155948578494 2275.49903204902 2399.040846093628 2384.1464889630274 2327.4980925668806 2342.9457891701823 2248.7238418444285 2006.1557600556293 2204.504818837755 0.7333235413803892 0.8844284796804873 0.8812026983374991 1.0322041542411753 1.0882447729728415 1.0814884452010325 1.0557917917339683 1.0627991234808982 1.0200584832606474 0.9100255725969798 1.0 11.106238915213268 -5.732180313134768 1.3263476708674535 1.0286056632212042 0.7353031189056027 0.74656879837772 0.05342874402157307 0.20873998288594037 0.5361080460998788 0.006607831284078205 0.06529501536922623 1.8527622221445754e-06 5.732180313134768 -0.29330254431560143 NS(ph)TELAPPLPVRR ddPTM_A549_PD325901_60min_R1 2 NSTELAPPLPVRR 13 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.732)T(0.268)ELAPPLPVRR;NS(0.889)T(0.111)ELAPPLPVRR 94.01 7.272600000000001e-05 147206000.0 1354.0500000000002 1343.1599999999999 1819.72 1445.3799999999999 1412.0800000000002 1769.11 1775.8899999999999 1971.53 1530.23 1704.9 1615.44 True False 1491.5121592010737 1456.3528070204293 1943.2171420652999 1534.6578399038515 1312.900372211541 1754.7029547065506 1843.472465754297 1932.2062875146357 1465.9197546181676 1597.2523230399456 1416.7511211178878 1.0527693516305077 1.0279524648417386 1.371600920655707 1.0832233107343012 0.9266979589016289 1.2385400149336052 1.3011971109644893 1.3638290160589588 1.0347052017587135 1.1274050178831927 1.0 10.468370628758072 -8.966156037265385 24.93978192753988 1.0153109687578787 1.1701618084565861 0.10697501862379255 0.13933852473437555 199.67833660590867 147144.94681565007 0.02414304565003107 0.02556785674898591 1.0810454736792303e-09 8.966156037265385 0.1548508396987074 NS(ph)TFSEIFKK ddPTM_A549_PD325901_60min_R1 1 NSTFSEIFKK 10 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 1 NS(0.907)T(0.091)FS(0.001)EIFKK 90.926 0.00027258 5358100.0 2065.9 1913.4 2285.6 2325.6 2301.4 2834.9 2548.9 2357.3 2352.3 2432.0 2519.2 True False 2275.6286471648004 2074.648933077883 2440.714560429324 2469.247030179188 2139.757603398988 2811.8135143081 2645.8997843115985 2310.281802233925 2253.441011343601 2278.443104952283 2209.354370524553 1.0299971238314805 0.9390295014490194 1.1047184611900176 1.1176328537974334 0.9684990474800831 1.272685609796725 1.1975895852702885 1.0456818666375416 1.0199545357717246 1.0312710062946249 1.0 11.109409123724323 -8.516725404568568 17.492370488704907 1.010653837494789 1.090581856060594 0.11597627447208858 0.08929621004675743 8.429224585067756 23962.327059365685 0.01536383427489655 0.01780102084850978 3.042808322441012e-09 8.516725404568568 0.07992801856580489 NS(ph)TIENTRR ddPTM_A549_PD325901_60min_R1 1 NSTIENTRR 9 1 O15198;O15198-2;H0YAK7;Q99717;Q15797 O15198;Q99717 SMAD9;SMAD5;SMAD1 Mothers against decapentaplegic homolog 9;Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 1 NS(0.5)T(0.5)IENTRR 46.592 0.015135 6946500.0 756.93 527.21 608.22 879.1 877.23 808.8 594.78 708.96 864.46 953.15 949.86 True False 833.7729763775857 571.6398369436557 649.4974667239776 933.4000104190426 815.6163910792098 802.2134009567858 617.4146783761042 694.819236631639 828.1297524406276 892.9679463344035 833.0332416586424 1.0008880014409394 0.6862149171928248 0.7796777298235675 1.1204835098303654 0.9790922502147045 0.9630028681202546 0.7411645148118907 0.8340834457556494 0.9941136932203912 1.0719475546455095 1.0 9.70223025633698 -8.782142260680518 22.82760400711577 0.9972204250524005 0.8861152775480498 0.18584515354307396 0.1218293644944313 125.63326466785321 138525.8767034063 0.021318851283470507 0.022713731533528344 1.651420758144626e-09 8.782142260680518 -0.11110514750435074 NS(ph)TPPSLAR ddPTM_A549_MK2206_60min_R1 1 NSTPPSLAR 9 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 NS(0.488)T(0.488)PPS(0.025)LAR 86.27600000000001 0.0012062999999999998 11328000.0 2329.2 2779.2 2366.2 2479.4 3866.6 2934.1 2902.3 2779.7 4579.9 4132.1 3893.0 True False 2722.312016527369 2920.6494090770193 2701.7627402827443 3086.8531113044955 3297.8282620540463 3244.584514502047 3429.6103420202985 3173.7309874742273 3542.559962597447 3198.655740131917 2926.26065866591 0.9303040070833876 0.9980824505252895 0.923281640096438 1.0548797497458071 1.1269769329289807 1.1087817843203558 1.1720112259527375 1.0845687919411593 1.2106098450616185 1.093086403857882 1.0 11.514842568908028 -6.449226686539424 3.815710935642869 1.1080933812995863 0.9560787793480384 0.6401889930730765 0.053223630666719986 0.17148294631750285 4.767265541988796 0.010989673156326644 0.026363327561692983 3.554457398882716e-07 6.449226686539424 -0.15201460195154792 NS(ph)TPPSLAR ddPTM_A549_PD325901_60min_R1 2 NSTPPSLAR 9 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 NS(0.499)T(0.499)PPS(0.002)LAR;NS(0.499)T(0.499)PPS(0.002)LAR 91.694 0.0010260999999999998 29504000.0 8238.9 7473.700000000001 6903.3 7698.3 9690.4 8556.3 8483.3 8900.5 8128.5 8937.9 9490.6 True False 9075.30706284238 8103.53492795243 7371.799450915188 8173.806506892178 9009.779734065154 8486.620329632222 8806.136623739876 8722.972545192826 7786.887412620183 8373.559468648444 8323.31636587024 1.0903474845742591 0.9735944870701991 0.8856805541050022 0.9820372250187285 1.0824747418000062 1.01962005967136 1.0580081588451258 1.0480164590356527 0.9355510556525661 1.0060364283381353 1.0 13.022942759097244 -8.761421123641975 24.999999999987192 0.9695657776907981 1.014025089516623 0.06517470515743062 0.05734681187594788 0.8914602165060711 1217246.3973109256 0.01052396308760114 0.011557442898611008 1.7321235896498638e-09 8.761421123641975 0.044459311825824854 NS(ph)TS(ph)SIEPR ddPTM_A549_PD325901_60min_R1 1 NSTSSIEPR 9 0 A0A0D9SEY1;O95819-2;O95819-3;G5E948;C9J840;A0A0D9SG62;O95819-6 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 2 NS(0.949)T(0.102)S(0.588)S(0.361)IEPR 50.284 0.032777999999999995 4888200.0 343.52 237.36 261.81 375.18 496.57 424.45 437.84 265.62 403.99 331.12 246.11 True False 378.39389751394174 257.3631602149925 279.5780009914252 398.3540165043979 461.69263627350085 420.993419925949 454.50224079524094 260.32200072514115 387.0117052130685 310.21302669070724 215.8400302198307 1.7531219631898296 1.1923791891284992 1.2953018988492453 1.8455984096123352 2.1390500909551946 1.9504881439146011 2.1057365509647834 1.2060876773414368 1.7930487908980617 1.4372358379247754 1.0 7.753818645165745 -10.790411256042612 0.7556670539969323 0.9379394957324122 1.7045732164936371 0.18753039681028028 0.3426510813139233 0.7313687026428556 0.6393066169895276 0.35400958203500504 0.06465534609707056 1.6202750479137042e-11 10.790411256042612 0.7666337207612249 NS(ph)WDSPAFSNDVIR ddPTM_A549_MK2206_60min_R1 2 NSWDSPAFSNDVIR 14 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 NS(1)WDSPAFSNDVIR;NS(0.999)WDS(0.001)PAFSNDVIR 127.83 1.2188000000000001e-08 20925000.0 3972.6 4246.5 3735.5 4170.799999999999 7302.900000000001 5205.3 4074.6 4990.3 6938.5 6517.9 6670.799999999999 True False 4643.0777592549475 4462.628711731997 4265.250070292529 5192.646187234327 6228.6530840931355 5756.1213910015085 4814.90207752331 5697.690307152796 5366.940828507696 5045.501863121852 5014.256255286044 0.9259753636165287 0.8899881626567212 0.8506246695701062 1.0355765487175141 1.2421888246191788 1.1479511811813343 0.9602425229957935 1.1362981900149747 1.0703363680007083 1.0062313544113086 1.0 12.291820012142962 -6.325975572239687 6.1195650845186575 1.0597063938759694 0.8892723060568998 0.5260516346732727 0.07778995583692705 0.1497561001762177 11.058062982412583 0.011636235513844113 0.027474771239503974 4.720895941386916e-07 6.325975572239687 -0.17043408781906966 NS(ph)WDSPAFSNDVIR ddPTM_A549_PD325901_60min_R1 1 NSWDSPAFSNDVIR 14 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 NS(1)WDSPAFSNDVIR 234.04 3.6451e-48 15867000.0 5685.8 4595.5 4307.9 5131.6 5052.7 4346.4 3932.7 3836.1 6368.5 5816.7 6984.3 True False 6263.018230335266 4982.778912908656 4600.259999507123 5448.567277290818 4697.815782868714 4311.004359444329 4082.361050556014 3759.5859761377665 6100.854092055311 5449.432569315769 6125.275377125529 1.0224876180627125 0.8134783509516229 0.7510290911469084 0.8895220119634398 0.7669558499218538 0.7038058036612548 0.6664779620849938 0.6137823599209454 0.9960130306693773 0.8896632777795339 1.0 12.580558990211216 -8.796287356066097 23.591386446396804 0.9981174616329042 0.7757962540618977 0.34632442308030764 0.10915110124339823 60.35517760692712 40858.894444414764 0.018393944864206695 0.01958248006124359 1.5985000122426716e-09 8.796287356066097 -0.22232120757100649 NSAAEIPVTSNGEVDDS(ph)REHSFNR ddPTM_A549_MK2206_60min_R1 1 NSAAEIPVTSNGEVDDSREHSFNR 24 1 P53367;P53367-2;P53367-3 P53367 ARFIP1 Arfaptin-1 1 NSAAEIPVTS(0.001)NGEVDDS(0.618)REHS(0.381)FNR 77.925 1.0331e-05 5559900.0 530.57 682.36 618.93 509.53 476.18 628.4 545.25 585.12 834.5 656.0 1135.9 True False 620.1172448089153 717.089209404791 706.7035807806604 634.3648728736707 406.1345527918318 694.8968709018395 644.3148671696814 668.0625518548474 645.4870824226667 507.8091443882133 853.8246807548438 0.7262817048819508 0.8398553304535907 0.8276916757148347 0.74296853578049 0.4756650421873247 0.8138636497219776 0.7546219753217484 0.7824352784745352 0.7559948745590356 0.5947463874425283 1.0 9.737796055672511 -10.603088556753196 0.5785477614234412 1.0325404790695418 0.7403992699871077 0.0 0.15175350716121988 0.7509067443336223 0.3765115462167225 0.1147016350189984 0.021165387110528237 2.4940861073377175e-11 10.603088556753196 -0.29214120908243413 NSAAEIPVTSNGEVDDSREHS(ph)FNR ddPTM_A549_MK2206_60min_R1 1 NSAAEIPVTSNGEVDDSREHSFNR 24 1 P53367;P53367-2;P53367-3 P53367 ARFIP1 Arfaptin-1 1 NSAAEIPVTSNGEVDDS(0.274)REHS(0.726)FNR 97.639 3.0543e-08 5536900.0 773.32 712.92 550.82 648.88 723.43 618.59 668.96 688.79 798.0 1176.2 1069.9 True False 903.8375101412263 749.2045828724775 628.9345586182659 807.8556291293304 617.0144053219259 684.048783213191 790.5013728415046 786.4280918309074 617.2542741441436 910.495603093623 804.2143022621776 1.1238764438767355 0.9315981831770922 0.7820484625169353 1.0045278066516723 0.7672263519640519 0.8505802263016554 0.9829486625864525 0.9778837427023627 0.7675246167692698 1.1321554472887219 1.0 9.6514361832361 -5.290273288912642 4.0058735921109205 0.8907395775524667 1.138760456009662 0.17739185342524122 0.1141876757191396 0.19753749378368965 6.386593503884658 0.013805768101064686 0.13362596364094798 5.12538756728171e-06 5.290273288912642 0.24802087845719534 NSAIS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 NSAISPQK 8 0 Q9H582;Q9H582-2 Q9H582 ZNF644 Zinc finger protein 644 1 NS(0.026)AIS(0.974)PQK 84.507 0.003151 23732000.0 5526.8 6149.6 5946.3 5754.9 8282.1 5874.7 6224.6 5898.2 9072.9 9060.2 8193.0 True False 6459.588722713141 6462.588372934676 6789.574753842985 7164.850758347274 7063.814061231531 6496.356854689746 7355.529247472535 6734.287912479934 7017.902636444114 7013.494527417819 6158.4519847032625 1.0488981222485554 1.0493852008567812 1.1024807485237107 1.163417491301997 1.1470113071884074 1.0548684751989286 1.1943795722922976 1.0935033559094018 1.1395562803567532 1.1388404983652325 1.0 12.588352039047187 -10.818428322296743 1.000443053273204 0.9982369110923146 1.1129397191982389 0.0 0.06105337444693033 0.414925285104505 0.718496598346702 0.034541105064690505 0.00804026986942654 1.5190486312228997e-11 10.818428322296743 0.11470280810592426 NSAIS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 NSAISPQK 8 0 Q9H582;Q9H582-2 Q9H582 ZNF644 Zinc finger protein 644 1 NS(0.001)AIS(0.999)PQK;NS(0.009)AIS(0.991)PQK 115.91 0.0012957 72438000.0 18650.8 18192.6 19034.2 19027.5 23823.0 20725.0 19814.9 20472.0 22541.0 20339.7 22918.0 True False 20544.21548600671 19725.75424893526 20325.975273942873 20202.785460412164 22149.75466488837 20556.22247135186 20568.96686262934 20063.669900026693 21593.68015843902 19055.447870805074 20099.231289171843 1.0221393639603817 0.9814183420816801 1.0112812267050824 1.0051521458582404 1.1020199900292313 1.0227367492619588 1.0233708228289586 0.9982307089941141 1.0743535336136107 0.9480684906129175 1.0 14.294852705008033 -6.573796620825935 24.999883810091298 1.0357212712348836 1.003529568240832 0.0 0.03985083974161352 145.202540878258 71291.70929777135 0.004939204737429406 0.01028177844278111 2.6681078411826806e-07 6.573796620825935 -0.032191702994051496 NSAKS(ph)PLAAK ddPTM_A549_MK2206_60min_R1 1 NSAKSPLAAK 10 1 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 NS(0.03)AKS(0.97)PLAAK 43.382 0.051788 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSAPASVS(ph)PDGTR ddPTM_A549_MK2206_60min_R1 1 NSAPASVSPDGTR 13 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637;A0A590UJM5 DOCK4 Dedicator of cytokinesis protein 4 1 NSAPAS(0.009)VS(0.93)PDGT(0.061)R 103.14 0.00012588 8383100.0 901.8 1100.4 958.63 981.29 1265.6 704.55 907.63 894.56 822.54 1540.1 1486.2 True False 1054.0017931068094 1156.4056598115835 1094.5781488112777 1221.7060940517822 1079.4319165301824 779.1050133575604 1072.5346224469833 1021.3666194751032 636.2360033264711 1192.1903403540962 1117.1355229666774 0.9434860600509691 1.0351525271890198 0.9798078445348367 1.093605985071002 0.9662497470885458 0.6974131583324471 0.9600756581428443 0.9142727972365884 0.5695244580862273 1.0671850602226867 1.0 10.125588498640901 -7.085759653269559 6.390004705173572 0.8094718919761186 1.0143989736588996 0.12435319617938789 0.14127149247893517 0.25893833810221367 15.981798577369004 0.02431184681635614 0.042479238017021186 8.208056679446454e-08 7.085759653269559 0.20492708168278106 NSAPASVS(ph)PDGTR ddPTM_A549_PD325901_60min_R1 2 NSAPASVSPDGTR 13 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637;A0A590UJM5 DOCK4 Dedicator of cytokinesis protein 4 1 NSAPAS(0.004)VS(0.975)PDGT(0.021)R;NSAPAS(0.044)VS(0.953)PDGT(0.003)R 97.09299999999999 0.00016441 24732000.0 2643.1 2459.06 2627.5 3106.0 3219.8 3334.8 2693.6 3319.0 2817.0 2879.3 2798.7 True False 2911.4255662526202 2666.2936162718206 2805.8179504410446 3297.8505657621954 2993.652355706987 3307.642494449415 2796.1064219944774 3252.799941294871 2698.611286381379 2697.5005066155886 2454.4776424210313 1.186169112292613 1.0862977809167818 1.1431425986318866 1.3436058690309696 1.219669840933702 1.3475952835271479 1.1391859406942784 1.3252514038328727 1.0994646028714854 1.0990120504641656 1.0 11.261200310068347 -9.059620859106344 2.570936163326599 1.0371743208660464 1.2216123353133987 0.3852306654077754 0.08679896771559097 0.16496208079463612 2.239444437301201 0.016668757152419552 0.016431818882642602 8.717242767950019e-10 9.059620859106344 0.1844380144473523 NSAPASVSPDGT(ph)R ddPTM_A549_MK2206_60min_R1 1 NSAPASVSPDGTR 13 0 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637;A0A590UJM5 DOCK4 Dedicator of cytokinesis protein 4 1 NSAPAS(0.133)VS(0.345)PDGT(0.523)R 81.619 0.00062943 6538300.0 917.01 1188.1 993.3 1049.6 804.7 914.47 935.54 780.4 1036.5 1246.9 1580.7 True False 1071.778869258012 1248.5692152145969 1134.1648761401607 1306.7520471183352 686.3296959796443 1011.2386084239421 1105.5155081740922 891.0240898747651 801.7344049503823 965.2244239903404 1188.168564899359 0.9020427748387659 1.0508350852728998 0.9545487985841702 1.0998035848802485 0.5776366386513333 0.8510901889662404 0.9304365902558047 0.7499138726584954 0.6747648680793802 0.8123632054447574 1.0 10.214523809768016 -6.715711977055468 24.999909204677287 0.8270076822012661 1.0019338395484747 0.3866273495617025 0.1194378750809937 143.92955818498214 78687.8661185641 0.020733485222963043 0.04316304372477783 1.9243675412374077e-07 6.715711977055468 0.17492615734720862 NSAS(ph)AER ddPTM_A549_PD325901_60min_R1 2 NSASAER 7 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 NS(0.001)AS(0.999)AER;NS(0.001)AS(0.999)AER 66.321 0.02436 27857000.0 8271.8 5500.5 5675.4 7089.1 5928.7 4430.2 3544.3 4553.5 5349.4 7092.1 10552.5 True False 9111.547046622687 5964.046439006432 6060.566772952652 7526.977606485759 5512.288564904654 4394.121920028129 3679.1802760153805 4462.676870348355 5124.5833210395995 6644.303595654644 9254.609397808963 0.9845415030460231 0.6444406438610392 0.6548700774327112 0.8133220196486929 0.5956262796147499 0.4748036066296263 0.39755111403042354 0.48221126127753133 0.5537330751368987 0.717945329732413 1.0 13.175956385321326 -10.703728782556066 0.9989195269274921 0.9964431571067481 0.6131993834964394 0.15217648599793687 0.1751377130731566 0.4048271279881712 0.7281686084634889 0.10716686324471458 0.029049528284924252 1.9782046457013253e-11 10.703728782556066 -0.3832437736103087 NSAS(ph)AERDR ddPTM_A549_MK2206_60min_R1 1 NSASAERDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 NSAS(1)AERDR 90.697 0.00029401 23879000.0 1322.5 2272.0 1258.2 946.85 701.75 379.87 298.2 199.92 504.71 3376.1 2394.4 True False 1545.7056679793247 2387.635095503377 1436.6316794116085 1178.828292505712 598.5235046026041 420.06759126270197 352.3790800366785 228.25927222932233 390.3939908562541 2613.4366651967175 1799.8043979218223 0.8588186970562482 1.3266081015583162 0.798215451118156 0.6549757817387645 0.3325491955090789 0.2333962466964415 0.19578743136951968 0.1268244885349131 0.21690912151733255 1.4520670514053475 1.0 10.813624408171483 -6.1340820929147695 2.5044432689514577 0.5045516304543771 1.089221995478732 0.2352640639371022 0.3938248302093856 0.29128017414410756 3.5146556973591214 0.05332395763528162 0.17525691319290734 7.34375039117677e-07 6.1340820929147695 0.584670365024355 NSAS(ph)AERDR ddPTM_A549_PD325901_60min_R1 3 NSASAERDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 NSAS(1)AERDR;NSAS(1)AERDR;NSAS(1)AERDR 113.24 6.8539e-05 145304000.0 6211.7699999999995 5901.110000000001 4392.959999999999 4595.9 5612.85 3787.45 3265.81 3593.21 4144.47 6427.78 7183.0 True False 6842.384317536618 6398.417249647345 4691.092682614454 4879.778304953791 5218.622779281307 3756.606262925043 3390.092186669803 3521.540607731285 3970.292338682657 6021.928873828205 6299.536536788606 1.0861726537464844 1.0156965059701275 0.7446726684128244 0.7746249706556059 0.8284137648547825 0.5963305778110616 0.5381494601820364 0.5590158239682986 0.6302514979469652 0.955932049708863 1.0 12.621029976660003 -5.699830403082859 4.4266469688321655 0.762501412225577 1.0678857975455511 0.3991491964371663 0.14665082318197736 0.20389017102987533 7.812982738498658 0.02529927651901362 0.10473757691045987 1.9960416396732955e-06 5.699830403082859 0.30538438531997414 NSAS(ph)VGIIQR ddPTM_A549_MK2206_60min_R1 2 NSASVGIIQR 10 0 Q53EU6 Q53EU6 AGPAT9 Glycerol-3-phosphate acyltransferase 3 1 NS(0.001)AS(0.999)VGIIQR;NS(0.001)AS(0.999)VGIIQR 127.17 1.6038999999999998e-06 7441700.0 1587.01 2422.9 2212.58 2064.8999999999996 3668.8 2359.3 2101.1 2720.2 3986.7 3270.2 3612.8999999999996 True False 1854.8584893307136 2546.215260957365 2526.357114316116 2570.8005926968817 3129.1243800299726 2608.9595600234097 2482.842672921078 3105.796680263119 3083.7188154517025 2531.459548747463 2715.71721903264 0.6830087007333661 0.937584827725306 0.9302725249192273 0.946637807014613 1.1522276171097783 0.9606889633938919 0.9142493391876367 1.143637731681588 1.1355080690434136 0.9321513782827466 1.0 11.407117547772414 -4.485009092199776 0.6341679033526425 1.0587893835847813 3.6101600025312143e-16 0.5340105639862429 0.08766673034362348 3.80736197874266 0.5184336790503032 0.014298921989599495 3.6852321568224253 3.27333841888616e-05 4.485009092199776 -1.0587893835847808 NSASAT(ph)TPLSGNSSR ddPTM_A549_PD325901_60min_R1 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASAT(0.902)T(0.097)PLSGNSSR;NSAS(0.007)AT(0.496)T(0.496)PLS(0.002)GNSSR 201.3 1.234e-38 27288000.0 4422.2 4548.5 4637.6 5529.4 5709.3 6091.299999999999 5027.5 5831.1 5369.3 5761.799999999999 5840.799999999999 True False 4871.138488548422 4931.8180579621385 4952.335424154288 5870.938479821464 5308.2984640157465 6041.694472364078 5218.824263653559 5714.794136090546 5143.646993243715 5397.998964685062 5122.418627881791 0.9509450207826382 0.9627909033279326 0.9667963093055839 1.146126255254776 1.0362875136995238 1.1794612879702149 1.0188203352312954 1.1156437127150056 1.0041442074348192 1.053798870577126 1.0 12.322609446166283 -6.037450364149044 24.918018128667978 1.0349439414909676 0.9588492398573915 0.2802513102272046 0.0622489311150313 634.2569911602686 422009.6183219877 0.009416635508078277 0.024922121413111488 9.173807775543184e-07 6.037450364149044 -0.07609470163357612 NSASATT(ph)PLSGNSSR ddPTM_A549_MK2206_60min_R1 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSAS(0.002)AT(0.019)T(0.978)PLSGNSSR;NSASAT(0.488)T(0.498)PLS(0.014)GNSSR 169.37 3.9337e-27 15056200.0 1854.13 2316.0 1741.1299999999999 2143.9300000000003 3755.8 2303.9 1930.96 2338.76 3249.3 3550.8 3134.6 True False 2167.0618148737276 2433.8745075641823 1988.048415175595 2669.192946244676 3203.3267952781753 2547.697168794954 2281.7904372489106 2670.2863921521107 2513.3387380658733 2748.6718138622996 2356.192309441089 0.9197304507745274 1.0329693793718902 0.8437547339449465 1.1328417190521405 1.359535375123109 1.0812772618714181 0.9684228354816135 1.133305792338117 1.0666950774752595 1.1665736293462015 1.0 11.202241579583584 -6.270835227261873 24.93574669318214 1.067307170851187 0.9422333041435145 0.2843914697235672 0.11153601486421441 791.7634516888413 2101270.4708911506 0.016207610831674386 0.03813179830469955 5.359999790748237e-07 6.270835227261873 -0.1250738667076725 NSASATTPLS(ph)GNS(ph)SR ddPTM_A549_MK2206_60min_R1 1 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 2 NSASAT(0.001)T(0.003)PLS(0.891)GNS(0.597)S(0.508)R 63.681000000000004 0.0050542 5580500.0 684.43 437.62 683.68 679.83 1090.3 735.39 694.88 1009.8 1024.5 616.89 751.67 True False 799.9450512930734 459.8929887738506 780.6361044191135 846.3883805187287 929.9183143116761 813.2084816876259 821.1307013275898 1152.9422423828007 792.4523857903197 477.53412055128797 565.0095939633712 1.4158079081130306 0.8139560702816399 1.381633361202219 1.4980070950327948 1.6458451754572532 1.4392826075451473 1.453303997136768 2.040571088882332 1.402546778421064 0.8451787821893973 1.0 9.14213155472886 -10.261346635420836 1.0363532165567038 1.0357305821284046 1.4478333558742011 0.3349395355348196 0.2778696861980406 0.5007275156585363 1.062385969566903 0.11906849233235116 0.05267214743329309 5.478395281152876e-11 10.261346635420836 0.4121027737457965 NSASATTPLS(ph)GNS(ph)SR ddPTM_A549_PD325901_60min_R1 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 2 NSASATT(0.002)PLS(0.991)GNS(0.558)S(0.449)R;NSASAT(0.009)T(0.025)PLS(0.803)GNS(0.61)S(0.552)R 100.41 8.7271e-06 14227900.0 1718.66 2165.1099999999997 2262.2 2123.17 2505.31 2091.98 2165.52 2386.63 2467.1 2060.76 2239.12 True False 1893.1370979893782 2347.5714181542044 2415.726495713692 2254.3133888310736 2329.345668450297 2074.9436084737595 2247.9300486180123 2339.0267923749834 2363.416366571354 1930.643261908499 1963.7224349511487 0.9640553391327291 1.1954700808888017 1.2301771638993308 1.147979647585558 1.186188855915497 1.0566379298535526 1.1447290149607798 1.1911188418200107 1.2035389139046775 0.9831548632057704 1.0 10.939375309009876 -10.881872739121038 1.1150581192261289 0.9994557439913418 1.1541869958310857 0.393248175616998 0.07317717492064309 0.41798609323607017 0.9175788385079505 0.05027006392511399 0.011925934836311861 1.3125844679892922e-11 10.881872739121038 0.1547312518397439 NSASATTPLS(ph)GNSS(ph)R ddPTM_A549_MK2206_60min_R1 1 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 2 NSASAT(0.003)T(0.02)PLS(0.976)GNS(0.178)S(0.823)R 82.259 0.00033734 5605000.0 745.62 648.3 828.04 734.63 844.0 1019.1 635.54 767.0 973.83 848.27 1002.2 True False 871.4624273412059 681.2957008868133 945.4685231441653 914.6143829787942 719.8487180400396 1126.940485576169 751.0093914369907 875.7245988389866 753.2590598869568 656.6452178508986 753.3260806871245 1.1568196690420258 0.9043835310538952 1.255058795099439 1.2141015775592892 0.9555605951986296 1.4959530998160357 0.9969247191760297 1.1624774732878222 0.9999110334795437 0.8716613358878518 1.0 9.55713066710296 -8.76681546243284 24.01909807507728 0.9999579678152101 1.1415273601712466 0.2032617409219888 0.15743326601688962 104.71061383442296 467821.3343927714 0.02434124768901162 0.026295187969226027 1.7107420779942287e-09 8.76681546243284 0.1415693923560365 NSASATTPLS(ph)GNSSR ddPTM_A549_MK2206_60min_R1 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATT(0.003)PLS(0.997)GNSSR;NSASATTPLS(1)GNSSR 191.91 6.6169e-34 85986000.0 5285.8 6989.2 7621.6 6528.1 9290.3 7195.200000000001 6450.5 6648.5 9594.6 8835.0 9010.4 True False 6177.913814597443 7344.9204267131245 8702.45748514029 8127.484793057542 7923.709176785988 7956.5912882127905 7622.472353375573 7590.9452351773225 7421.438419427825 6839.167363826015 6772.8690056109235 0.9121561054081224 1.0844622006757092 1.284899719443978 1.2000061991933404 1.1699191539392924 1.174774129194175 1.1254421644742876 1.1207872511469912 1.0957599229041046 1.0097888144832223 1.0 12.725551377454433 -9.714881892285913 0.6430188429337018 1.0064198777311288 1.144596592115111 0.23755764492292097 0.08687155285106465 0.7057110882885554 0.6215828894744228 0.04300064632096146 0.021281346649970008 1.9280491807776783e-10 9.714881892285913 0.13817671438398205 NSASATTPLS(ph)GNSSR ddPTM_A549_PD325901_60min_R1 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATT(0.001)PLS(0.999)GNSSR;NSASATT(0.003)PLS(0.997)GNSSR 191.91 6.6169e-34 103092000.0 9473.5 8445.7 8417.1 10352.5 12017.7 9927.0 10246.4 11719.4 12389.599999999999 10671.0 11207.2 True False 10435.242745977897 9157.448779186727 8988.33502213409 10991.95041276662 11173.61821081429 9846.157803286358 10636.332359045224 11485.647373308551 11868.908197994577 9997.231238875742 9828.78544829421 1.0617021605440518 0.931696884356755 0.9144909174606126 1.1183426956048041 1.1368259353706287 1.0017674976306623 1.0821614140423794 1.1685723972438418 1.2075661087967315 1.0171380066710853 1.0 13.2627974371404 -6.27033296821783 24.740082178285277 1.1008665558681825 0.9655366767584219 0.3549365707424089 0.07256408614144248 490.62510108842685 1364815.4530434732 0.012374610382241063 0.029175736784925452 5.366202185177218e-07 6.27033296821783 -0.13532987910976058 NSASATTPLS(ph)GNSSRR ddPTM_A549_MK2206_60min_R1 2 NSASATTPLSGNSSRR 16 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASAT(0.003)T(0.01)PLS(0.392)GNS(0.298)S(0.298)RR;NSASAT(0.002)T(0.012)PLS(0.398)GNS(0.294)S(0.294)RR 52.19 0.007499600000000001 13505000.0 1696.6 2061.77 2029.48 1947.3899999999999 2544.6 2038.11 2262.9 2020.2199999999998 3123.64 2805.2 3116.9 True False 1982.9446021124559 2166.705286468311 2317.290781062051 2424.5006374216587 2170.292710811238 2253.781447412075 2674.039638547954 2306.592371664272 2416.1405274280883 2171.5033717039887 2342.8877079362387 0.8463677518113563 0.9248011670080765 0.9890746249649603 1.0348343325243317 0.9263323647393101 0.9619673361969815 1.1413434922595649 0.9845082902825343 1.031266039445132 0.9268491035009032 1.0 11.194072093713423 -3.965768890650471 0.6656201364001569 1.0163238071439467 8.648003997223823e-11 0.38498477575161405 0.057478132598127944 8.262005294025187 0.6803401773987665 0.008022866333317176 9.482295021912373 0.00010820095883808776 3.965768890650471 -1.0163238070574667 NSASATTPLSGNS(ph)SR ddPTM_A549_MK2206_60min_R1 1 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATTPLSGNS(0.512)S(0.488)R 152.59 2.1330000000000002e-14 58488000.0 4482.7 5556.9 5702.8 5510.4 7097.1 5457.8 5717.4 5832.6 7953.5 8591.0 7585.4 True False 5239.270168507309 5839.722474561059 6511.542792360927 6860.448247371257 6053.125991471521 6035.340773405574 6756.177572775676 6659.38891158836 6152.044949129631 6650.28713329137 5701.735833610175 0.9188903732830347 1.024200812695932 1.14202814412712 1.2032209922688435 1.061628628213534 1.0585093644340533 1.1849334606050765 1.1679581632549656 1.0789775480065222 1.1663618461749392 1.0 12.477185484167864 -10.071451135611582 1.0066462618179919 1.0089980011717972 1.097467221211629 0.0 0.09094604326177977 0.6443612667024646 1.3117548826451142 0.0303665332905084 0.015310864297976243 8.482988229266472e-11 10.071451135611582 0.08846922003983182 NSASATTPLSGNS(ph)SRR ddPTM_A549_PD325901_60min_R1 1 NSASATTPLSGNSSRR 16 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATTPLS(0.058)GNS(0.471)S(0.471)RR 69.081 0.00074672 9382300.0 2516.5 2541.5 2483.3 2918.2 2604.6 3266.3 2416.3 2705.3 3236.9 3091.8 2929.2 True False 2771.973227450615 2755.6811243950247 2651.8316712960013 3098.45058628694 2421.6618813822042 3239.7003357383137 2508.253618750096 2651.340669233205 3100.8643496229647 2896.58322035011 2568.9269697286904 1.079039326580533 1.0726973389539594 1.0322721130433952 1.2061263799235888 0.9426744745639697 1.2611103289092196 0.9763818311327852 1.0320809818557117 1.2070659797504688 1.1275459577023415 1.0 11.326950162091222 NSASATTPLSGNSS(ph)R ddPTM_A549_MK2206_60min_R1 1 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATTPLSGNS(0.45)S(0.55)R 222.96 5.475e-54 59898000.0 5442.0 8001.5 7206.6 7744.7 10084.0 8490.4 6869.8 7703.3 10090.0 11013.0 8846.4 True False 6360.476555874093 8408.742172830234 8228.604244832062 9642.1518476728 8600.656958194024 9388.848492528616 8117.95373586846 8795.266365366842 7804.631110419062 8525.155651139316 6649.5947317806595 0.956520932843505 1.2645495721178337 1.2374595109540711 1.45003601521604 1.2934106972096477 1.4119429636299694 1.220819322577663 1.3226770532843592 1.1737002667422862 1.282056425242687 1.0 12.699050701025252 -9.617123102389314 0.81048128139968 1.0236674353211845 1.278947649701727 0.0 0.14461472065612402 0.3817116663953852 0.5329878709345688 0.042705290472914374 0.026128027809757388 2.4147762600972474e-10 9.617123102389314 0.2552802143805424 NSASATTPLSGNSS(ph)R ddPTM_A549_PD325901_60min_R1 2 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATTPLSGNS(0.049)S(0.951)R;NSASATTPLSGNS(0.149)S(0.851)R 203.76 7.214100000000001e-39 127664000.0 56418.0 57613.0 62825.0 67544.0 76688.0 75566.0 72792.0 80557.0 80354.0 82285.0 77367.0 True False 62145.513827263516 62468.249702841065 67088.68229741517 71716.03947644615 71301.69943923761 74950.61554982745 75562.1393933107 78950.22743925605 76977.00081856202 77089.51105715413 67851.34946982094 0.9159068214981446 0.9206633352314654 0.9887597346498614 1.0569581892891335 1.0508516042256657 1.1046296961737532 1.1136423959691382 1.1635763777162853 1.1344947656906958 1.1361529528818313 1.0 16.050089888694803 -6.055274400251493 1.5042064236608343 1.0791362342302355 0.9070629431994153 0.7044559317974138 0.045005849550165525 0.26916338856317157 1.0920277206271716 0.008744068312120165 0.04365901505925763 8.804923757858e-07 6.055274400251493 -0.17207329103082025 NSASVGIIQRDES(ph)PMEK ddPTM_A549_PD325901_60min_R1 3 NSASVGIIQRDESPMEK 17 1 Q53EU6 Q53EU6 AGPAT9 Glycerol-3-phosphate acyltransferase 3 1 NSASVGIIQRDES(1)PMEK;NSASVGIIQRDES(0.999)PMEK;NSASVGIIQRDES(1)PMEK 64.954 0.00071387 21170300.0 11277.6 10750.2 10953.7 12348.4 13307.599999999999 13617.5 10879.400000000001 12425.4 13579.600000000002 13451.7 15221.8 True False 12422.493649869673 11656.157081830179 11697.083951949027 13111.13262274883 12372.920084727715 13506.603594867736 11293.421520436115 12177.56564946227 13008.896636331054 12602.357366318516 13349.615098940387 0.9305506981138129 0.8731455547924656 0.8762113263383505 0.9821356290481749 0.9268372153823224 1.0117597769496598 0.8459735682815694 0.9122035024387223 0.9744772819228041 0.9440240241322625 1.0 13.704510525742796 -9.104009945296824 0.2730224622737664 1.0200075890873188 0.8988062400926061 0.07374196099728392 0.05008236779010438 1.5569128462448065 0.3614385227392293 0.06975236720590546 0.047117652023070514 7.870277666377132e-10 9.104009945296824 -0.12120134899471269 NSATCHSEDS(ph)DLEID ddPTM_A549_MK2206_60min_R1 2 NSATCHSEDSDLEID 15 0 Q13371-2;Q13371 Q13371-2 PDCL Phosducin-like protein 1 NS(0.001)AT(0.004)CHS(0.102)EDS(0.894)DLEID;NS(0.002)AT(0.001)CHS(0.105)EDS(0.892)DLEID 55.841 0.013318 2846700.0 574.35 697.4300000000001 1004.1300000000001 721.88 941.99 872.79 758.39 705.03 1367.56 1192.8000000000002 1457.5900000000001 True False 671.2862384906812 732.9262080356167 1146.5307329896505 898.7406324064249 803.4245188466075 965.1480584888873 896.1796462408339 804.9701615638212 1057.8098435445684 923.3456515644216 1095.6301755625082 0.6126941859245851 0.668954017864034 1.0464577907422177 0.8202956184051812 0.7332990061487863 0.8809067877245805 0.8179581634658116 0.7347097401279049 0.9654807499268424 0.842753031231881 1.0 10.097545190698336 -2.6321800022088193 0.09389271886053135 1.1460052133412366 7.733852895700417e-11 0.1431485094968401 0.1212349766976745 78.49534105535778 0.581380031147355 0.979866523157699 11.584050167743621 0.002332491113377861 2.6321800022088193 -1.146005213263898 NSATCHSEDS(ph)DLEID ddPTM_A549_PD325901_60min_R1 2 NSATCHSEDSDLEID 15 0 Q13371-2;Q13371 Q13371-2 PDCL Phosducin-like protein 1 NSATCHS(0.013)EDS(0.987)DLEID;NSATCHS(0.002)EDS(0.998)DLEID 118.21 7.8031e-07 5523800.0 1318.9 1819.07 1720.52 1571.86 1549.07 1468.38 1641.13 1625.5 1241.64 1558.81 1734.04 True False 1452.7937570771362 1972.3694129267212 1837.2848335272404 1668.9502222469298 1440.268667201386 1456.4220001198373 1703.5841002107943 1593.078127319918 1189.4581887194092 1460.3864705718208 1520.7640729852312 0.9553051540896343 1.2969595007955423 1.2081327183911472 1.0974419056144664 0.9470691034764951 0.9576909567970714 1.1202159036192187 1.0475511327623197 0.7821451136628479 0.96029785060947 1.0 10.570580639476681 -7.16073194899069 0.7034459300931697 0.9100089427647469 1.1689311044782316 0.2506407117644548 0.11692999867575607 0.6166829914000965 0.5783701203144767 0.025271937659025617 0.07651210066420673 6.906659584277529e-08 7.16073194899069 0.2589221617134847 NSATFKS(ph)FEDR ddPTM_A549_MK2206_60min_R1 5 NSATFKSFEDR 11 1 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;O43399-6 O43399-2 TPD52L2 Tumor protein D54 1 NSAT(0.001)FKS(0.999)FEDR;NSAT(0.002)FKS(0.998)FEDR;NSAT(0.013)FKS(0.987)FEDR;NSATFKS(1)FEDR;NSATFKS(1)FEDR 118.13 1.3447999999999999e-05 302326400.0 12351.600000000002 26999.500000000004 18358.199999999997 11914.8 22767.0 17351.0 11071.1 16580.8 21090.5 22990.399999999998 19905.2 True False 14436.248112373116 28373.659225811403 20961.668810184543 14833.926534875693 19418.00445926252 19187.071303338354 13082.575563360402 18931.179176570364 16313.535424607853 17796.85267247375 14962.189484427618 0.9648486357827581 1.89635743186799 1.4009760290765652 0.9914275280576136 1.2978050090511444 1.2823705596903394 0.8743757440698445 1.2652679740671378 1.0903173924903633 1.189455105550989 1.0 13.869033686272118 -6.739528386342423 0.7142565717956977 1.0501146850959602 1.4574743297766592 0.14364778224964525 0.2499697554693077 0.8313561932853109 0.7259662201768452 0.04122377321815988 0.18387137484927507 1.8216780007396666e-07 6.739528386342423 0.4073596446806991 NSATFKS(ph)FEDR ddPTM_A549_PD325901_60min_R1 4 NSATFKSFEDR 11 1 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;O43399-6 O43399-2 TPD52L2 Tumor protein D54 1 NSATFKS(1)FEDR;NSAT(0.002)FKS(0.998)FEDR;NSAT(0.004)FKS(0.995)FEDR;NSAT(0.312)FKS(0.688)FEDR 160.87 1.7241e-13 1047056000.0 21650.7 25377.7 27210.8 23702.1 36053.1 29975.399999999998 27454.699999999997 32352.3 26232.1 28535.6 36223.3 True False 23848.66312559708 27516.36784204591 29057.48851983297 25166.124885625264 33520.85463244287 29731.290280712212 28499.503632288288 31707.00799661162 25129.656061585018 26733.857346084034 31768.063738417746 0.7507118885799898 0.866164462166129 0.9146760960660367 0.7921831526417952 1.0551746215462743 0.935886131604476 0.8971117618925977 0.9980780779619159 0.7910351813854878 0.8415324763326464 1.0 14.955289540104138 -4.325086780128509 0.9804357427878584 0.9136571379050648 1.2139230026748657e-15 0.2644120499417554 0.07981266371864798 12.152110994126952 2.274480243101587 0.01357573323788716 18.185425086825994 4.730567239702435e-05 4.325086780128509 -0.9136571379050635 NSATFKS(ph)FEDRVGTIK ddPTM_A549_MK2206_60min_R1 1 NSATFKSFEDRVGTIK 16 2 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;O43399-6 O43399-2 TPD52L2 Tumor protein D54 1 NS(0.126)AT(0.126)FKS(0.749)FEDRVGTIK 65.25 0.00058679 3264800.0 790.81 2029.3 1241.8 1214.1 1490.0 895.03 657.13 724.55 1839.3 1831.8 1614.1 True False 924.2793945517806 2132.5827021588943 1417.9059128066567 1511.5545545030195 1270.8229737910647 989.7414805271699 776.522014971504 827.2571813413144 1422.7014867585508 1417.9951077596477 1213.2744231062545 0.7618057192579879 1.7577084471120759 1.1686605155464331 1.2458472095975623 1.0474324271482398 0.81576060755753 0.640021746262015 0.6818384741214197 1.1726131035682068 1.1687340314396988 1.0 10.244690186379392 -6.784076865264415 3.7895141800244985 0.9945204384272166 1.270675881406288 0.19626608791239597 0.27376608846268424 0.3077018313137475 9.48856096644542 0.04002762855805485 0.08182023827149389 1.6440807135706223e-07 6.784076865264415 0.27615544297907135 NSATFKS(ph)FEDRVGTIK ddPTM_A549_PD325901_60min_R1 1 NSATFKSFEDRVGTIK 16 2 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;O43399-6 O43399-2 TPD52L2 Tumor protein D54 1 NS(0.186)AT(0.112)FKS(0.702)FEDRVGTIK 73.21 0.00012954 11902000.0 1742.2 1567.6 1837.7 1750.4 2081.5 3647.5 2448.0 2580.7 2179.3 2177.1 2421.0 True False 1919.066861460148 1699.7071534926786 1962.4173729878232 1858.5182325531694 1935.3026207851701 3617.79596932477 2541.159979596999 2529.2259139800144 2087.7115997198935 2039.6375344537894 2123.232347983464 0.9038421363930227 0.8005280981645614 0.924259360899256 0.8753249423306373 0.9114888545397399 1.70390959461444 1.1968355615957251 1.1912148552098605 0.983270437501903 0.9606285135919916 1.0 11.052046540475212 -7.027338864288386 24.913804402294076 1.0795639165659277 0.876466335480761 0.2810302225211726 0.20328576034798376 986.9805693285972 899430.5881245524 0.032633552548835335 0.05662394668143774 9.389903644108405e-08 7.027338864288386 -0.20309758108516662 NSDDAPWS(ph)PK ddPTM_A549_PD325901_60min_R1 2 NSDDAPWSPK 10 0 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 NSDDAPWS(1)PK;NSDDAPWS(1)PK 96.604 0.00053286 68853000.0 8418.0 9264.900000000001 8756.0 9938.1 8971.6 9852.2 9264.4 8684.5 11540.6 10242.2 10983.8 True False 9272.589162995931 10045.685638169385 9350.234814105339 10551.953865937305 8341.465766339768 9771.966949686495 9616.961811674197 8511.280834641544 11055.588715517555 9595.50574405522 9632.862232044923 0.9625995825155167 1.0428557365588758 0.9706600788912574 1.095412102005872 0.8659384475146792 1.0144406422816703 0.9983493566099355 0.883567171377963 1.1476950930264271 0.9961219742284455 1.0 13.233748817355794 -8.770210617015772 24.999989395864993 1.0697448956156277 0.9829708538286318 0.13132167249454718 0.07258928887153046 215.12608458232071 613155.8933406862 0.013177099181428118 0.01413167710701693 1.6974202657773522e-09 8.770210617015772 -0.08677404178699588 NSDDRDS(ph)KRDSLEEGELR ddPTM_A549_MK2206_60min_R1 1 NSDDRDSKRDSLEEGELR 18 3 P21127;P21127-8;P21127-2;P21127-3;A0A0D9SEI3;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 NS(0.02)DDRDS(0.558)KRDS(0.422)LEEGELR 49.902 0.0032173 5154400.0 694.76 659.66 621.61 777.66 1247.7 867.87 812.59 856.4 1524.8 983.04 1202.7 True False 812.0185027488216 693.2338763643305 709.7636450795188 968.1867349104838 1064.1649828181955 959.707427354519 960.2270846646705 977.7973226150035 1179.4352346052513 760.9705812490686 904.0363971686343 0.8982143919116476 0.766820759137 0.7851051653478097 1.0709599059758688 1.1771262596849756 1.0615805186165532 1.0621553376302335 1.0815906590457887 1.3046324664572608 0.8417477256804751 1.0 9.82023704754531 -6.338843818971732 4.2143441688953835 1.1310673081667129 0.8110205003058149 0.44003332945073814 0.11922931835491443 0.1156037066743542 3.862749491934164 0.01632926382761275 0.04003561691672255 4.5830667337760605e-07 6.338843818971732 -0.320046807860898 NSDDRDS(ph)KRDSLEEGELR ddPTM_A549_PD325901_60min_R1 2 NSDDRDSKRDSLEEGELR 18 3 P21127;P21127-8;P21127-2;P21127-3;A0A0D9SEI3;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 NS(0.001)DDRDS(0.591)KRDS(0.408)LEEGELR;NS(0.004)DDRDS(0.796)KRDS(0.2)LEEGELR 108.77 9.9787e-10 47493000.0 4386.29 3749.2599999999998 4597.639999999999 4557.629999999999 4353.7699999999995 4760.94 4209.1 4478.25 4447.31 4272.39 4527.99 True False 4831.582931783967 4065.2232982291143 4909.663498255287 4839.144453971265 4047.9762148911113 4722.168483124627 4369.2796038079005 4388.927790630838 4260.405026637125 4002.6305662693603 3971.0759352935333 1.2166936645160946 1.023708275658703 1.2363559846891659 1.21859781399863 1.019365099245299 1.18914081726709 1.1002760146123804 1.105223839117148 1.0728591182989315 1.0079461162390224 1.0 11.95531423314068 -9.147743817199041 0.360630611932449 0.9900707345315582 1.1627550731473228 0.3933266917164129 0.0684858261196518 0.855772949791658 0.2974473710986776 0.05431714458627367 0.03543296770258145 7.116331699618512e-10 9.147743817199041 0.1726843386157646 NSDDRDSKRDS(ph)LEEGELR ddPTM_A549_MK2206_60min_R1 5 NSDDRDSKRDSLEEGELR 18 3 P21127;P21127-8;P21127-2;P21127-3;A0A0D9SEI3;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 NSDDRDS(0.025)KRDS(0.975)LEEGELR;NSDDRDS(0.317)KRDS(0.683)LEEGELR;NSDDRDS(0.001)KRDS(0.999)LEEGELR;NSDDRDS(0.021)KRDS(0.979)LEEGELR;NS(0.001)DDRDS(0.133)KRDS(0.866)LEEGELR 174.99 4.8361e-31 113606000.0 5814.620000000001 6317.0199999999995 6066.88 5356.539999999999 9658.82 7183.950000000001 7393.23 6020.36 10152.800000000001 9213.29 9226.77 True False 6795.98570218975 6638.529335826037 6927.2548109908585 6668.892540464216 8238.02037296148 7944.150820679939 8736.484191480795 6873.764466579244 7853.207010690058 7132.001390092194 6935.508363102716 0.9798828501663649 0.9571799193759719 0.9988099571538595 0.9615578543518293 1.1878033940220156 1.14543165472098 1.2596746675354569 0.9910974231028322 1.1323188726106292 1.0283314526783403 1.0 12.75978591862373 -6.725255527945549 24.996997265599678 1.0871147408394926 0.9748771541806431 0.38502914507328956 0.07787615377461973 182.46151577884558 126049.65728783446 0.012321445017024377 0.025648509843393265 1.8825411237429708e-07 6.725255527945549 -0.11223758665884942 NSDDRDSKRDS(ph)LEEGELR ddPTM_A549_PD325901_60min_R1 4 NSDDRDSKRDSLEEGELR 18 3 P21127;P21127-8;P21127-2;P21127-3;A0A0D9SEI3;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 NSDDRDS(0.196)KRDS(0.804)LEEGELR;NSDDRDS(0.058)KRDS(0.942)LEEGELR;NSDDRDS(0.356)KRDS(0.644)LEEGELR;NSDDRDS(0.048)KRDS(0.952)LEEGELR 161.46 2.2684e-23 141525000.0 8676.550000000001 9455.21 10257.779999999999 10653.93 11123.69 10053.27 10051.99 11249.990000000002 10767.84 9808.66 11654.55 True False 9557.386968661487 10252.033729762376 10953.9346358421 11311.999059269418 10342.400389047229 9971.39950227105 10434.523980109981 11025.600124003577 10315.305130972269 9189.339533643612 10221.114234279503 0.9350631202817388 1.0030250611405138 1.0716967235435908 1.1067285620711793 1.0118662361057424 0.975568736804549 1.0208793034632904 1.0787082377991624 1.0092153257006824 0.8990545769290463 1.0 13.319264856905907 -8.977700897866734 24.947155140624023 1.00406555135726 1.0277592489172032 0.08667929354938331 0.05562407130437523 392.6716347085244 439307.00736198766 0.008334777870094345 0.008562595477559103 1.0526866180406143e-09 8.977700897866734 0.023693697559943105 NSDGGS(ph)DPETQK ddPTM_A549_MK2206_60min_R1 2 NSDGGSDPETQK 12 0 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NS(0.003)DGGS(0.989)DPET(0.008)QK;NS(0.001)DGGS(0.999)DPETQK 104.95 0.00017041 11741500.0 5145.3 6304.6 6357.1 5545.1 2511.4 1672.44 1249.4499999999998 1587.85 2350.4 9000.5 7725.4 True False 6013.700849492641 6625.477210876147 7258.632370996291 6903.649748928999 2141.9763868314644 1849.4164907241768 1476.4588918572376 1812.9326000866822 1818.0381528175378 6967.280798881272 5806.969969806736 1.0356004733554331 1.1409525527642177 1.2499862077361263 1.188855768985277 0.36886300393641475 0.3184821861211946 0.2542563332571145 0.312199410279888 0.3130786214274231 1.1998134715880324 1.0 12.5035698579617 -6.75155836691168 24.987477214525672 0.5631106907416813 1.159794708044927 0.5055584698848501 0.2922421142094038 149.7759674104276 378756.32267867605 0.046056915012186166 0.09496474087532315 1.7719098936906343e-07 6.75155836691168 0.5966840173032456 NSDGGS(ph)DPETQK ddPTM_A549_PD325901_60min_R1 2 NSDGGSDPETQK 12 0 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NSDGGS(1)DPETQK;NSDGGS(1)DPETQK 137.33 2.3111e-08 25388000.0 8136.1 7619.3 7806.0 8123.1 9622.3 7387.4 7859.200000000001 6914.6 7727.9 8522.5 8620.7 True False 8962.070882519749 8261.405150935674 8335.762101291264 8624.845438101376 8946.46284313291 7327.239463684663 8158.286156719257 6776.682878601239 7403.123237496154 7984.387895541053 7560.408551119803 1.1853950513285874 1.092719407301348 1.1025544512480905 1.1407909215202285 1.1833306074190677 0.9691591947897308 1.07908006578704 0.8963381850042372 0.9791961885974597 1.0560788932971688 1.0 12.884248481905887 -7.268173366227515 24.834481669383585 0.9882225391153097 1.1361353396514127 0.6554486069495591 0.05185128741832774 195.67659019587512 721641.5365678787 0.006767478611640854 0.010965132782743825 5.3929529798538146e-08 7.268173366227515 0.147912800536103 NSDGGS(ph)DPETQKEK ddPTM_A549_MK2206_60min_R1 4 NSDGGSDPETQKEK 14 1 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NS(0.013)DGGS(0.98)DPET(0.006)QKEK;NSDGGS(1)DPETQKEK;NS(0.004)DGGS(0.996)DPET(0.001)QKEK;NSDGGS(1)DPETQKEK 171.04 4.0068000000000005e-23 177011000.0 19910.9 23970.5 25477.4 23080.6 13548.3 8914.75 8236.36 7986.37 11554.7 32475.5 34070.6 True False 23271.37314523216 25190.496063716415 29090.47842079266 28735.3480361275 11555.363017324482 9858.102927867876 9732.799998829309 9118.462404732352 8937.578899064336 25139.261994785706 25609.92971927634 0.9086855528430453 0.9836222254353075 1.1359062183953026 1.1220393164335272 0.4512063540973669 0.38493283800180755 0.38004009013361434 0.35605183242142896 0.3489888100839694 0.9816216705922325 1.0 14.644415673336427 -6.756220414339846 24.999928081000554 0.5984522393724077 1.040734943009243 0.49756045537437366 0.2297018257746499 116.2096407775338 556661.8508113741 0.041888652830518576 0.08518075361336255 1.7529905933890902e-07 6.756220414339846 0.4422827036368353 NSDGGS(ph)DPETQKEK ddPTM_A549_PD325901_60min_R1 3 NSDGGSDPETQKEK 14 1 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NSDGGS(1)DPETQKEK;NSDGGS(1)DPETQKEK;NS(0.008)DGGS(0.791)DPET(0.201)QKEK 193.54 1.0477999999999999e-27 397446200.0 23730.5 23227.699999999997 27492.399999999998 24944.9 28375.399999999998 24263.6 27190.2 29612.0 26338.4 25320.1 28893.2 True False 26139.602890529226 25185.179796620247 29358.19958923134 26485.68981902169 26382.409793815772 24066.005286170926 28224.93794004836 29021.365429835405 25231.488642253233 23721.384564844713 25339.519569085405 1.0315745260782265 0.9939091279120598 1.1585933785835776 1.0452325170100947 1.0411566692054695 0.9497419720432195 1.1138702872047823 1.1453005393694167 0.9957366623886598 0.9361418435803794 1.0 14.629101551152537 -8.896682343763919 20.440517841168106 0.9979631027479605 1.0588064141907017 0.24619857903513387 0.061531974217515634 3.9641206097468937 770.9957367924961 0.010123991649259357 0.010777666435476577 1.2685794042871355e-09 8.896682343763919 0.06084331144274113 NSDLLTS(ph)PDVGLLK ddPTM_A549_MK2206_60min_R1 2 NSDLLTSPDVGLLK 14 0 P05412 P05412 JUN Transcription factor AP-1 1 NSDLLT(0.083)S(0.917)PDVGLLK;NSDLLT(0.132)S(0.868)PDVGLLK 175.29 8.1628e-23 22145500.0 3018.9 4036.3 4115.5 4224.6 5492.0 4030.7 4173.3 4404.0 6779.2 5414.9 4835.700000000001 True False 3528.4165149813134 4241.730429568791 4699.139784309706 5259.627189649498 4684.134075208406 4457.2259986378795 4931.5345899298145 5028.280486684353 5243.722024157871 4191.670329188621 3634.862231469498 0.9707153367281404 1.166957689027446 1.2927972190048982 1.4469949215993096 1.288668944493863 1.2262434488021619 1.356732188426327 1.3833482994626525 1.4426191944111029 1.1531854750638009 1.0 11.827684968822814 -3.9339476903497412 15.903265498367897 1.2430332698947384 1.2459070017353882 0.0 0.1554974302589822 0.0 0.0 0.02520659757641736 0.0 0.00011642662538330084 3.9339476903497412 0.0028737318406497625 NSDLLTS(ph)PDVGLLK ddPTM_A549_PD325901_60min_R1 2 NSDLLTSPDVGLLK 14 0 P05412 P05412 JUN Transcription factor AP-1 1 NSDLLT(0.016)S(0.984)PDVGLLK;NSDLLT(0.073)S(0.927)PDVGLLK 229.23 3.18e-47 65352000.0 7835.099999999999 8268.7 9102.9 9237.400000000001 10672.8 9213.2 7921.400000000001 8477.5 6707.8 7281.0 7605.400000000001 True False 8630.513584104236 8965.532368005172 9720.677534184504 9807.973218342471 9923.179347161162 9138.170753826722 8222.853211756406 8308.409612029907 6425.894493002845 6821.276417416764 6669.984014602824 1.2939331736341733 1.3441609977440163 1.457376436420641 1.4704642765064415 1.4877366010827022 1.3700438762402147 1.2328145305526719 1.245641607811956 0.9634047816208277 1.0226825735238212 1.0 12.703467588488609 -8.373406014510616 1.3320488792122316 0.9796300253324836 1.40937529013452 0.854408064757525 0.06981150757386481 0.09580537638720224 0.3294872354171832 0.013522299416193742 0.016855517903330015 4.23247094535191e-09 8.373406014510616 0.42974526480203645 NSDRPRDEVQEVVFVPAGTHT(ph)PGSR ddPTM_A549_MK2206_60min_R1 2 NSDRPRDEVQEVVFVPAGTHTPGSR 25 2 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 NSDRPRDEVQEVVFVPAGT(0.007)HT(0.825)PGS(0.168)R;NSDRPRDEVQEVVFVPAGT(0.063)HT(0.732)PGS(0.205)R 115.66 5.3769e-17 11091600.0 366.89 346.4 596.9000000000001 413.06 867.5699999999999 412.32000000000005 486.07000000000005 395.09000000000003 687.9100000000001 488.45 579.65 True False 428.81206240070657 364.0302804059729 681.5493955180333 514.2597185429681 739.9516022630298 455.9514287241352 574.3826272080097 451.09521741237995 532.0994833665388 378.1088057567418 435.7069074738494 0.9841754974390515 0.835493480047299 1.564238215706826 1.1802881930987825 1.698278337043442 1.046463622455884 1.3182775332577976 1.035318030709564 1.221232608983769 0.867805396864027 1.0 8.767214174956367 -10.71597052877855 0.5394744810953375 0.9610319249141905 1.2246062245092413 0.15124622016250755 0.24183911225210036 2.6246436510664255 1.0468967421068625 0.35348717645068023 0.05394897815125824 1.923222234333616e-11 10.71597052877855 0.26357429959505074 NSDRPRDEVQEVVFVPAGTHT(ph)PGSR ddPTM_A549_PD325901_60min_R1 2 NSDRPRDEVQEVVFVPAGTHTPGSR 25 2 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 NSDRPRDEVQEVVFVPAGT(0.062)HT(0.728)PGS(0.21)R;NSDRPRDEVQEVVFVPAGT(0.047)HT(0.645)PGS(0.309)R 97.352 4.4114e-09 21008100.0 670.0 759.83 952.45 767.2 764.55 1103.3000000000002 758.45 1103.13 1002.53 938.89 1451.31 True False 738.0179067720693 823.8635407236167 1017.0889845471256 814.5882015623815 710.8506455543128 1094.3150905979496 787.3132297897653 1081.1272067612565 960.3971504919867 879.6083251680305 1272.8080706120934 0.5798344022262182 0.6472802614516898 0.7990906154908395 0.6399929575954417 0.5584900520095419 0.859764418426176 0.6185639830293866 0.8494031674715438 0.7545498592180766 0.6910769545521713 1.0 10.313799173302838 -14.999999994732262 0.13390678645208495 2.076812527581136 0.5757045488679202 0.04043152505696912 0.1287826178341711 30.10350731275155 0.27385250233242114 8.567975594768582 0.225473499444396 1.0000000121294157e-15 14.999999994732262 -1.5011079787132158 NSERKT(ph)PEGR ddPTM_A549_MK2206_60min_R1 2 NSERKTPEGR 10 2 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 NS(0.02)ERKT(0.98)PEGR;NS(0.001)ERKT(0.999)PEGR 56.648 0.0051017 518510000.0 2243.4 2277.06 1848.91 1331.53 1742.14 1707.0700000000002 1324.5 1256.03 2144.9 3621.0 3862.3999999999996 True False 2622.0310741359676 2392.9526278903713 2111.1132398513105 1657.7549097746523 1485.8735137989033 1887.7110143386426 1565.1445053943012 1434.0760989305509 1659.0835747014723 2803.0135851062823 2903.259483182947 0.9031335605115605 0.8242296776266419 0.7271527922598299 0.5709978454826905 0.5117949402751583 0.65020402939288 0.5390990762142891 0.49395381543999023 0.5714554914266774 0.9654712578543749 1.0 11.503457805428404 -10.73799852204334 1.006511300202961 0.9985994607329595 0.6364283775240133 0.5214627283173751 0.1246254438162933 0.36022977788472277 0.6522382281099743 0.0916879164430158 0.023955803241873748 1.828106437399518e-11 10.73799852204334 -0.3621710832089462 NSERKT(ph)PEGR ddPTM_A549_PD325901_60min_R1 2 NSERKTPEGR 10 2 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 NSERKT(1)PEGR;NSERKT(1)PEGR 110.92 6.0155e-05 654100000.0 7494.0 7209.8 6345.6 6966.799999999999 6813.4 6691.0 4830.6 5703.3 7283.9 9015.7 9693.2 True False 8254.78536320878 7817.3951487953045 6776.250575192648 7397.123413249217 6334.850288953962 6636.51071439398 5014.431126405749 5589.543207347705 6977.783013444566 8446.447163371016 8500.997850257454 0.971037225113377 0.9195855929499562 0.7971123736947455 0.8701476630799517 0.7451890237523245 0.7806743198027032 0.5898638271334095 0.6575161299656633 0.8208192892594652 0.9935830254462674 1.0 13.053416479927092 -10.1834201717415 0.9935227496248056 0.9831012449665064 0.7920850877167396 0.355057472224376 0.10368916185905501 0.43806647449588265 0.8590923368596352 0.04642761225433603 0.02127332367127627 6.555107650843402e-11 10.1834201717415 -0.19101615724976684 NSESESNKVAAET(ph)QSPSLFGSTK ddPTM_A549_PD325901_60min_R1 1 NSESESNKVAAETQSPSLFGSTK 23 1 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 NSES(0.001)ES(0.001)NKVAAET(0.511)QS(0.442)PS(0.044)LFGS(0.001)TK 64.152 0.00028756 8491900.0 2250.8 2053.3 2256.3 2685.7 2808.9 3236.1 2601.7 3050.5 3208.1 2571.3 3692.6 True False 2479.2995590486157 2226.338797056978 2409.4260862341116 2851.5895893327515 2611.6125541789397 3209.7462745255375 2700.709117204867 2989.6553844290443 3073.2747134682654 2408.9476791791963 3238.433609320006 0.7655860388532744 0.6874739660092819 0.7440097210268374 0.880545947005385 0.8064431355525971 0.9911416016953666 0.8339553756582807 0.923179458064234 0.9490003761767962 0.7438619931087666 1.0 11.661080452555122 -5.922306223531107 0.28427984326921163 0.999466901024824 0.5487971758262793 0.20906863750520222 0.09158259453334074 1.8560892976023562 0.14568492634979532 0.02402319294488694 0.277981077255344 1.1958970001161892e-06 5.922306223531107 -0.45066972519854476 NSESESNKVAAETQS(ph)PSLFGSTK ddPTM_A549_PD325901_60min_R1 1 NSESESNKVAAETQSPSLFGSTK 23 1 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 NSESESNKVAAET(0.005)QS(0.974)PS(0.021)LFGSTK 113.47 2.1921e-12 6425300.0 2537.7 2188.4 3030.7 3387.6 3483.0 3490.8 3677.8 3239.1 3701.8 3403.2 3464.7 True False 2795.3254358439985 2372.824148190469 3236.381527079608 3596.8443582021923 3238.3660956976923 3462.37208217105 3817.7606915693837 3174.4936094752074 3546.226219356262 3188.321371206256 3038.5638645428785 0.919949542105322 0.7809031680653639 1.065102354716013 1.1837316964681608 1.065755481886135 1.1394764884074369 1.2564358893749061 1.0447348652165909 1.1670731231741795 1.0492856208852162 1.0 11.56917389943169 -5.8399587010184195 6.105567963804551 1.1002824086463674 0.8517389067067949 0.627577917976225 0.07657200454579811 0.10125028165608184 6.039593525439238 0.011772099903232289 0.03785950922662897 1.445577230537348e-06 5.8399587010184195 -0.24854350193957253 NSFLGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NSFLGSPR 8 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5;H0YES6;J3KNK0;Q8TDC3;Q8TDC3-2 Q8IWQ3-6 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 1 NSFLGS(1)PR;NSFLGS(1)PR 107.45 0.0018269000000000002 42673000.0 2249.2 2942.5499999999997 2958.8999999999996 2241.5 4089.6000000000004 2893.7 2719.21 2957.88 4013.2 3786.2 4387.799999999999 True False 2628.8099723395835 3092.3132263527586 3378.5165126458487 2790.6676006247603 3488.0252574603605 3199.9094133173994 3213.2552589756438 3377.168548127589 3104.216607763505 2930.8947903698995 3298.1881628806277 0.7970466942806528 0.9375793840858192 1.0243552962409102 0.8461214044826962 1.0575579940272206 0.9702022005083567 0.9742486178136047 1.0239465977520155 0.9411884508894397 0.8886378355715353 1.0 11.68745799208244 -5.296592373206854 3.3554543287930647 0.9752203551671856 0.7800196694182975 0.41329572113273383 0.058532138361353785 0.16386867620701193 3.0717239910722025 0.006595744965268 0.07764273981130974 5.0513519268767154e-06 5.296592373206854 -0.19520068574888816 NSFLGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NSFLGSPR 8 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5;H0YES6;J3KNK0;Q8TDC3;Q8TDC3-2 Q8IWQ3-6 BRSK2;BRSK1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 1 NSFLGS(1)PR;NSFLGS(1)PR 82.26100000000001 0.0035692 69361000.0 2526.1 2855.2 2784.8 2864.1 3047.2 3417.8 3279.2 3453.4 3154.1 2981.6 2742.3 True False 2782.5478123834687 3095.8177243252703 2973.7932743627844 3041.008952156956 2833.175184269311 3389.9665699679804 3403.991750447091 3384.5192278601094 3021.544145678207 2793.3412671569617 2405.014484871975 1.1569775691108117 1.2872345442402058 1.2364970327906724 1.264445171239306 1.1780283246070047 1.409541019936284 1.415372660688276 1.4072760264644626 1.2563517453571806 1.1614654650637823 1.0 11.23182986771771 -10.250578258639091 0.8648811397941821 1.0139997168122832 1.2928131496552648 0.38539638931679765 0.09557190343389439 0.29922249943781654 0.4348101573975685 0.04622810429298395 0.01797106479912675 5.6159307175187965e-11 10.250578258639091 0.27881343284298166 NSGEPLPPKPGPGS(ph)PSHPGALDLDGVSR ddPTM_A549_MK2206_60min_R1 5 NSGEPLPPKPGPGSPSHPGALDLDGVSR 28 1 A1X283;G3V144;A0A1B0GUF2 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 NSGEPLPPKPGPGS(0.88)PS(0.12)HPGALDLDGVSR;NSGEPLPPKPGPGS(0.773)PS(0.222)HPGALDLDGVS(0.005)R;NSGEPLPPKPGPGS(0.825)PS(0.175)HPGALDLDGVSR;NS(0.001)GEPLPPKPGPGS(0.785)PS(0.208)HPGALDLDGVS(0.005)R;NS(0.008)GEPLPPKPGPGS(0.835)PS(0.157)HPGALDLDGVSR 135.11 1.047e-27 78129500.0 11132.03 14407.640000000001 14175.2 13890.6 18186.899999999998 15213.000000000002 13059.9 14340.359999999999 21092.0 20565.399999999998 20354.100000000002 True False 13010.844511996886 15140.92733599398 16185.456510884944 17293.79762357272 15511.631102040748 16822.829562427887 15432.714779916229 16373.149945510628 16314.69567700286 15919.661856709388 15299.615225417883 0.8504033807583233 0.9896279816788942 1.0578995793302943 1.1303419967609263 1.0138575953381255 1.0995589963909305 1.0086995360691962 1.0701674325972093 1.0663467960879554 1.0405269428123523 1.0 13.90120775015615 -5.31889650064557 2.66762498769446 1.044123088338524 0.8249822932446945 0.7020022777334223 0.038328939097108154 0.18388755570138715 1.8500319158531693 0.005726566574667708 0.08353173656815216 4.7984779045133005e-06 5.31889650064557 -0.21914079509382944 NSGEPLPPKPGPGS(ph)PSHPGALDLDGVSR ddPTM_A549_PD325901_60min_R1 2 NSGEPLPPKPGPGSPSHPGALDLDGVSR 28 1 A1X283;G3V144;A0A1B0GUF2 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 NSGEPLPPKPGPGS(0.5)PS(0.5)HPGALDLDGVSR;NSGEPLPPKPGPGS(0.789)PS(0.211)HPGALDLDGVSR 77.643 1.7622e-06 22071000.0 4311.8 4767.6 5124.200000000001 4932.2 5701.0 6441.0 5204.799999999999 5591.5 5923.7 5171.1 5938.6 True False 4749.530761820606 5169.382383893655 5471.959026317794 5236.8507921610735 5300.5814273823 6388.546631506742 5402.871512175845 5479.9731460531075 5674.747489221647 4844.595863494551 5208.189847887069 0.9119350293552494 0.9925487616375663 1.050645077490356 1.0055030529053453 1.0177396719769565 1.2266347460622113 1.0373799093302556 1.0521838308709694 1.0895815350363731 0.9301880317323636 1.0 12.346566322953116 -4.9485475501154985 1.0401119634053233 1.0538432373260715 0.7491432775288651 0.243243271011081 0.0694551112863267 2.898744781306496 1.5902330172698655 0.009265389596070534 1.1398502066655816 1.125777202841938e-05 4.9485475501154985 -0.30469995979720643 NSGEPLPPKPGPGSPS(ph)HPGALDLDGVSR ddPTM_A549_PD325901_60min_R1 2 NSGEPLPPKPGPGSPSHPGALDLDGVSR 28 1 A1X283;G3V144;A0A1B0GUF2 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 NS(0.001)GEPLPPKPGPGS(0.423)PS(0.576)HPGALDLDGVSR;NSGEPLPPKPGPGS(0.435)PS(0.565)HPGALDLDGVSR 109.84 2.0851999999999996e-15 137693000.0 9979.0 10303.099999999999 11411.5 11431.2 12264.9 11626.6 12684.3 12627.2 12462.0 12708.0 13049.4 True False 10992.060733848466 11171.378395732598 12185.953012924056 12137.279261861166 11403.455735608 11531.916824386946 13167.00797761529 12375.340590153237 11938.265477772362 11905.614711239154 11444.406526962164 0.9604745084816757 0.9761430939571805 1.064795538695245 1.0605424783947202 0.9964217636574089 1.0076465561773442 1.1505190720545277 1.081344022601597 1.0431528668303336 1.0402998777778836 1.0 13.482355030489513 -5.652916077594707 6.175458436237835 1.035888874364691 0.9648166069636973 0.3103868910191643 0.04308177433451639 0.21824050550211258 10.895854771197524 0.006490755883864959 0.025841817856857536 2.2237395611870022e-06 5.652916077594707 -0.0710722674009937 NSGPQGPRRT(ph)PTMPQEEAAEK ddPTM_A549_PD325901_60min_R1 1 NSGPQGPRRTPTMPQEEAAEK 21 2 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 NS(0.159)GPQGPRRT(0.711)PT(0.13)MPQEEAAEK 69.619 0.00041049 12941000.0 1742.8 1915.7 2160.2 1812.4 2417.5 2274.7 1956.0 2004.9 2325.7 2754.6 2474.0 True False 1919.7277730184508 2077.1427621497355 2306.8041623378654 1924.3478317409524 2247.703139922243 2256.1755973743802 2030.436650364269 1964.910696686377 2227.958916839607 2580.6740858970215 2169.7136839781456 0.8847839174331295 0.9573349596714151 1.0631836722845227 0.8869132577035153 1.0359445840803772 1.0398494575734563 0.9358085655990731 0.905608288870509 1.0268446630961323 1.1894076646856855 1.0 11.083288961452645 -5.3930213129860185 3.6797156790608736 0.9984397338697705 0.8849561956355971 0.16745865080481193 0.07967747594743431 0.24014536023270064 5.1838266871215115 0.007324591238974304 0.05690742664545614 4.045560376373381e-06 5.3930213129860185 -0.11348353823417334 NSGS(ph)DGSPS(ph)PLLAR ddPTM_A549_PD325901_60min_R1 1 NSGSDGSPSPLLAR 14 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 2 NS(0.411)GS(0.562)DGS(0.081)PS(0.947)PLLAR 53.981 0.0052871 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSGSDGSPS(ph)PLLAR ddPTM_A549_MK2206_60min_R1 1 NSGSDGSPSPLLAR 14 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 NSGS(0.001)DGS(0.049)PS(0.95)PLLAR 95.428 5.0061e-05 15217000.0 3208.3 1667.6 1469.3 1590.0 2010.2 1608.7 1566.2 1441.7 2075.5 2858.9 4045.6 True False 3749.7826045958927 1752.4737171045049 1677.6688336985194 1979.5500713778133 1714.5022428958387 1778.9315662313645 1850.7582667788263 1646.0653900210789 1605.4025638924438 2213.0725044077167 3040.9658671201673 1.233089343468029 0.5762885193986473 0.5516894654550308 0.650960963679764 0.5638018701339432 0.58498899493273 0.6086086946222509 0.5412968977451639 0.52792521654075 0.7277531551196015 1.0 11.570313907800667 -10.837768965862677 1.0725315027713993 1.0009779899187772 0.6287477761333404 0.08593146253877193 0.20545149603865762 0.45632797097182637 0.9278830569645639 0.12756981980279505 0.031000894621872895 1.4528843112788778e-11 10.837768965862677 -0.37223021378543675 NSGSFPS(ph)PSIS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 2 NSGS(0.044)FPS(0.912)PS(0.044)IS(1)PR;NS(0.008)GS(0.114)FPS(0.828)PS(0.051)IS(0.999)PR 119.77 1.3357000000000001e-05 33805000.0 3958.2 4903.1 4190.6 3694.2999999999997 6394.2 5458.799999999999 4906.5 5698.8 8374.3 6222.6 7040.6 True False 4626.247391301144 5152.646847166647 4784.890093579947 4599.403665843431 5453.621650345518 6036.4465927418205 5797.94753923529 6506.622351843046 6477.534421009155 4816.910338216608 5292.2247093252545 0.8741592894098744 0.9736258625011401 0.9041358514404443 0.869086994310535 1.0304969932088996 1.1406255259919702 1.0955595912280365 1.2294682688696006 1.2239719166866263 0.9101862832333799 1.0 12.369658604809771 -6.973371112392148 3.6929729802339244 1.1193851707259423 0.9107276261956392 0.4958951419578673 0.09027752184263381 0.13891792204010606 4.0921727545057776 0.013510967250669826 0.025863735445195966 1.063234077415923e-07 6.973371112392148 -0.20865754453030316 NSGSFPS(ph)PSIS(ph)PR ddPTM_A549_PD325901_60min_R1 1 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 2 NSGS(0.001)FPS(0.817)PS(0.188)IS(0.994)PR 96.48899999999999 0.0001915 29647000.0 2210.3 1601.8 2340.0 2182.3 2052.8 1732.0 1876.2 1688.4 2083.5 2519.0 2151.1 True False 2434.6880288631387 1736.789307517589 2498.8064715630985 2317.095714637103 1908.6184097755454 1717.8951662427694 1947.5998176960334 1654.723537475823 1995.9377405664188 2359.949910104772 1886.5283369463968 1.290565310460172 0.9206272036861206 1.324552842714124 1.2282326585073395 1.0117093776947472 0.91061190685501 1.032372416334063 0.8771262562396589 1.0579951021552723 1.2509485619095826 1.0 10.881518055239479 -6.772281417045372 24.550454341316804 1.006913101683131 1.1812224291468478 0.27513092004287576 0.131984678290351 132.6960277320011 300474.3005360566 0.014987904974596405 0.02853117463369639 1.6893459032334976e-07 6.772281417045372 0.17430932746371686 NSGSFPS(ph)PSISPR ddPTM_A549_MK2206_60min_R1 2 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 NSGS(0.005)FPS(0.624)PS(0.37)ISPR;NSGSFPS(0.891)PS(0.108)ISPR 132.24 3.5198e-08 10157800.0 6821.4 7910.1 7484.0 6587.4 10410.2 8364.0 7513.6 7841.1 12091.5 10611.0 12569.900000000001 True False 7972.685552781979 8312.690303231191 8545.343736064598 8201.313295719627 8878.873370308553 9249.072928426138 8878.723862386281 8952.599937361638 9352.794556157785 8213.96773034044 9448.446918408585 0.8438091065790556 0.8797943593285603 0.9044178170081631 0.8680064953046257 0.9397177596467922 0.9788987553505748 0.9397019361020803 0.9475207951815997 0.9898763931176415 0.8693458090278323 1.0 13.205861491535444 -6.249974083837422 0.3211181507068715 1.0036987550945635 0.7928925117035673 0.2537225001376996 0.044406615645933005 0.9868178958790795 0.11277579862340456 0.008119247158290226 0.074621390274809 5.623748834432428e-07 6.249974083837422 -0.21080624339099618 NSGSFPS(ph)PSISPR ddPTM_A549_PD325901_60min_R1 2 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 NSGSFPS(0.897)PS(0.103)ISPR;NSGSFPS(0.897)PS(0.103)ISPR 141.65 2.6294e-12 21270000.0 5730.6 5989.4 6940.4 7120.799999999999 7970.700000000001 6427.9 5877.1 6821.700000000001 7357.0 6814.6 7658.3 True False 6312.366293355248 6494.147757801131 7411.417280015608 7560.635643489835 7410.865529422223 6375.553313563452 6100.756256572524 6685.635841979881 7047.810874656663 6384.324993013091 6716.37764996355 0.9398468374376634 0.9669122399387973 1.1034842985721374 1.1257013880883944 1.1034021485469094 0.9492547390628121 0.9083402653222803 0.9954228589299419 1.049347020368176 0.9505607524984453 1.0 12.713467637392629 -7.257050093436537 24.899617997547836 1.0073138147169305 1.0507854766786981 0.14326277056789327 0.06663972691060063 783.2811148244705 4443412.055614426 0.010621930952360822 0.01797599548768476 5.5328628706010835e-08 7.257050093436537 0.04347166196176766 NSGSFPSPS(ph)IS(ph)PR ddPTM_A549_PD325901_60min_R1 1 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 2 NS(0.001)GS(0.02)FPS(0.409)PS(0.571)IS(1)PR 86.944 0.00022527 25668000.0 3024.6 3756.3 3493.8 4197.0 3523.8 3698.5 3329.8 3766.7 4169.3 3759.8 4423.2 True False 3331.6551654071654 4072.856583735996 3730.910277926136 4456.239157921422 3276.3004444500543 3668.3806422337675 3456.517361136477 3691.5702135810134 3994.078820131308 3522.4055863485196 3879.17444097499 0.8588567531832337 1.0499287015080265 0.9617794545450786 1.1487596718649735 0.8445870363145078 0.9456601393031859 0.8910445801627105 0.9516381048987258 1.0296208332222971 0.9080296954790205 1.0 11.921533937940781 -8.756679762167035 24.87074181762259 1.0139876163180448 0.9599507602195652 0.0 0.08736833454397633 211.34795616101664 1104366.608494506 0.013281613132864132 0.014829346098283234 1.751137457414141e-09 8.756679762167035 -0.054036856098479635 NSGSFPSPSIS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 NSGSFPSPSIS(1)PR;NSGSFPSPSIS(1)PR 249.58 1.3278999999999998e-68 90486000.0 12710.3 17865.8 16655.6 17789.9 25826.0 21460.7 22616.0 20837.5 31052.0 30735.0 28004.0 True False 14855.487903000094 18775.092908998347 19017.614528380203 22148.426298618968 22027.02961149533 23731.657029540263 26725.03445375427 23791.279437167377 24018.771579854594 23791.94215361546 21049.833928918622 0.7057294586344156 0.8919354410300028 0.9034567489985504 1.0521900730148317 1.046422963994705 1.127403527727471 1.2696078526794912 1.1302359684882126 1.1410432814321254 1.1302674517032498 1.0 14.361521230852016 -5.664593280386799 0.9730565833254576 1.092846526915669 0.6555695361276069 0.7735119962479053 0.07041258284858391 0.5251305444893275 0.5628410558412317 0.013111154009709667 0.2061377466597907 2.164744872418201e-06 5.664593280386799 -0.43727699078806215 NSGSFPSPSIS(ph)PR ddPTM_A549_PD325901_60min_R1 4 NSGSFPSPSISPR 13 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 NSGSFPSPSIS(1)PR;NSGSFPSPSIS(1)PR;NSGSFPSPSIS(1)PR;NSGSFPSPSIS(1)PR 181.75 4.55e-25 162824000.0 25142.1 24634.9 26909.1 30663.6 28845.199999999997 31089.5 28553.4 32492.6 34357.5 34805.5 33643.4 True False 27694.50748336422 26710.969479189054 28735.313343563503 32557.62092991166 26819.21266253777 30836.31741969086 29640.01526202001 31844.5096030484 32913.57375642464 32607.874790056216 29505.475083084217 0.9386226591973013 0.9052885745433301 0.9738976668787057 1.1034433723989507 0.9089571541219986 1.0451049282500666 1.0045598377439082 1.0792745927112752 1.1155073308849828 1.1051465769737983 1.0 14.848695067661378 -5.842023561605699 0.5781799248689217 1.0534192820137775 0.8726221120485826 0.39955583475293643 0.05827174487585953 1.8033420385204475 0.5953363341137128 0.011598227463627672 0.1905372494186066 1.4387205218065516e-06 5.842023561605699 -0.1807971699651949 NSGTQS(ph)DGEEK ddPTM_A549_PD325901_60min_R1 2 NSGTQSDGEEK 11 0 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 NS(0.12)GT(0.09)QS(0.791)DGEEK;NS(0.001)GT(0.006)QS(0.994)DGEEK 63.76 0.006563299999999999 5937300.0 1674.3899999999999 1443.5 1689.7800000000002 1359.6999999999998 1529.4099999999999 938.52 982.27 997.97 1176.1 1571.1100000000001 1819.88 True False 1844.3728401792307 1565.148810963691 1804.4586322726047 1443.685580897249 1421.9895177780677 930.8770042853139 1019.6508223687683 978.0647054576807 1126.6726069979197 1471.90984647269 1596.046297169825 1.1555885587089476 0.9806412343671216 1.130580381955301 0.904538661226339 0.8909450310430205 0.5832393495952989 0.638860429159765 0.6128047207603096 0.705914740064735 0.9222225251753293 1.0 10.640286785676333 -6.529531154984696 2.2815973855217058 0.8013935997893242 1.0790158626182522 0.5155179479942422 0.13462756571570197 0.27378938549608284 2.8335455664279365 0.024780517147966877 0.06314022525074954 2.954396941293978e-07 6.529531154984696 0.277622262828928 NSGTQS(ph)DGEEKQPGLVMER ddPTM_A549_MK2206_60min_R1 1 NSGTQSDGEEKQPGLVMER 19 1 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 NS(0.006)GT(0.084)QS(0.909)DGEEKQPGLVMER 78.645 7.4406e-05 20334000.0 2638.3 3079.5 3396.6 3022.3 4387.7 2697.9 3233.8 2777.2 4892.5 5277.5 4579.7 True False 3083.5805397579234 3236.233396392014 3878.288954291422 3762.763635676205 3742.2751423510435 2983.3899872789207 3821.3396010147953 3170.876604818297 3784.3565617170702 4085.3090846170658 3442.4340967100634 0.8957558672524489 0.9401003201440762 1.1266124042862304 1.0930532088536657 1.0871014628653424 0.8666513006393205 1.1100690655681258 0.921114686799293 1.0993257838498005 1.186750122107319 1.0 11.749213319774782 NSGTQS(ph)DGEEKQPGLVMER ddPTM_A549_PD325901_60min_R1 3 NSGTQSDGEEKQPGLVMER 19 1 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 NSGT(0.029)QS(0.971)DGEEKQPGLVMER;NS(0.002)GT(0.098)QS(0.9)DGEEKQPGLVMER;NSGT(0.038)QS(0.962)DGEEKQPGLVMER 141.19 3.647e-21 110408000.0 22425.5 23550.7 23975.5 25314.7 25532.6 25880.699999999997 25909.899999999998 26243.0 24956.4 26099.6 28320.8 True False 24702.120251219436 25535.400140188853 25602.621606393623 26878.33152514496 23739.278258688173 25669.936159918732 26895.9154229413 25719.56277776477 23907.56929621878 24451.66680181441 24837.521140342873 0.9945485345192717 1.0280977717503554 1.0308042200237133 1.082166427691017 0.9557829110461891 1.0335144161477448 1.0828743847249327 1.0355124664992925 0.9625585887227047 0.9844648611933446 1.0 14.600233574968223 -8.749922969676119 24.958995339016244 0.98231933362186 1.0314381235133034 0.278442687584353 0.034435409990212995 200.7481723887585 435071.8462630699 0.005932776058267953 0.006698927570532233 1.7785948494319046e-09 8.749922969676119 0.04911878989144347 NSGYDT(ph)EPEIIEETNIDRVPEPR ddPTM_A549_PD325901_60min_R1 1 NSGYDTEPEIIEETNIDRVPEPR 23 1 Q6ZVL6;A0A590UJI0 Q6ZVL6 KIAA1549L UPF0606 protein KIAA1549L 1 NS(0.003)GYDT(0.997)EPEIIEETNIDRVPEPR 79.395 2.7997e-05 2627300.0 682.81 552.44 494.35 942.17 669.66 835.78 632.29 754.59 757.29 635.66 735.37 True False 752.1283685418448 598.9960575883489 527.8995637680421 1000.3657010766796 622.625391801584 828.9736847819753 656.3521419523643 739.5391104855967 725.4637348469137 595.5243191175857 644.9241518945063 1.1662276351915482 0.928785277817181 0.8185451920466974 1.5511369796557328 0.9654242130219216 1.2853816721653417 1.0177198977961788 1.1467071101510973 1.1248822558681004 0.9234021045237563 1.0 9.332985688108971 NSHTDNVS(ph)YEHSFNK ddPTM_A549_MK2206_60min_R1 1 NSHTDNVSYEHSFNK 15 0 Q86SQ4-2;Q86SQ4 Q86SQ4-2 GPR126 G-protein coupled receptor 126 1 NS(0.004)HT(0.004)DNVS(0.992)YEHSFNK 81.35600000000001 0.00010549 5070800.0 4036.9 4593.7 4281.6 3279.2 5214.3 4640.0 4002.5 3838.3 5953.6 5343.3 5955.7 True False 4718.230027270879 4827.499708720894 4888.7952619366915 4082.6041472088796 4447.283377341441 5131.001720217275 4729.702440800823 4382.3907793007575 4605.119105945581 4136.244818916981 4476.735321042014 1.053944378863268 1.0783527196772569 1.0920447404960196 0.9119601348820873 0.9934211112365433 1.1461481084441179 1.0565070529342635 0.9789255930995499 1.0286779931572287 0.9239422307312597 1.0 12.12823130866454 -7.676534370568912 0.006114749437154257 5.7338223930773717e-08 2.0672004262968735 0.14048543448047845 0.0628708977930292 9340.665262565877 25.48293935948232 4249.980721003012 4363.757493715905 2.106035218326315e-08 7.676534370568912 2.0672003689586496 NSIPVS(ph)PVRPKPIEK ddPTM_A549_MK2206_60min_R1 2 NSIPVSPVRPKPIEK 15 2 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 NS(0.001)IPVS(0.999)PVRPKPIEK;NSIPVS(1)PVRPKPIEK 120.4 1.2105000000000002e-07 34146000.0 6418.4 7492.4 8215.2 7893.6 10882.7 9453.9 8470.7 7341.9 12954.8 11597.900000000001 10485.0 True False 7501.669005186011 7873.73115737214 9380.238891036595 9827.532354357165 9281.86924622552 10454.305423009071 10009.71654348321 8382.636808625753 10020.5584845646 8977.926334908627 7881.285128721318 0.9518332204284942 0.9990415305085653 1.1901915408253314 1.2469454148465267 1.1777101189246577 1.3264721745583143 1.2700614658649223 1.0636129351642651 1.2714371223605718 1.1391449729677818 1.0 12.9442151805447 -5.6887085197624225 5.01117076527926 1.1632431633333877 0.9655124347767237 0.4188641153274506 0.0931407862867662 0.20105617242270626 9.122976614890526 0.01663042815610993 0.06762305893247272 2.047818585533212e-06 5.6887085197624225 -0.19773072855666407 NSIPVS(ph)PVRPKPIEK ddPTM_A549_PD325901_60min_R1 2 NSIPVSPVRPKPIEK 15 2 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 NSIPVS(1)PVRPKPIEK;NSIPVS(1)PVRPKPIEK 162.42 1.7269e-20 69212000.0 11747.3 11931.0 13019.1 13715.0 17315.9 15408.4 15088.2 15754.8 17862.699999999997 14823.2 16298.5 True False 12939.877248094816 12936.467241848135 13902.654416208174 14562.14440097505 16099.690920612024 15282.919099038741 15662.389707579854 15440.5581545985 17111.992838212514 13887.260622256856 14293.88782470404 0.9052734572137123 0.9050348932702632 0.9726293214768553 1.0187672227151094 1.1263339350394947 1.0691926008139903 1.095740354175065 1.0802210248154234 1.1971545494178262 0.9715523720744182 1.0 13.803110751025638 -6.243675518762933 1.5598982585638037 1.0945812561514114 0.9019136002831031 0.5483937127765829 0.058897701443072735 0.24396053739912918 1.1035199155616244 0.01029296539854716 0.040020078907120255 5.705904272220257e-07 6.243675518762933 -0.19266765586830836 NSISRT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 NSISRTPPR 9 1 Q9BVA0;H3BTU7 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 1 NSIS(0.023)RT(0.977)PPR;NS(0.002)IS(0.043)RT(0.955)PPR 66.663 0.0020853 20927600.0 2176.51 2080.29 2102.4700000000003 1756.47 2558.6 2342.29 2206.82 2044.1299999999999 3131.1 3516.8 3021.6000000000004 True False 2543.8516774394557 2186.1678753629935 2400.631860604455 2186.805228850934 2182.2333293569245 2590.1495731137315 2607.7706284592336 2333.8916873855765 2421.9108493392605 2722.352437476323 2271.253328082435 1.1200211116860175 0.9625381054295352 1.0569634971679938 0.9628187229546963 0.9608057817131883 1.1404054057239545 1.1481637016073905 1.0275787639047844 1.0663323282321933 1.1986124153639612 1.0 11.149272913113556 -4.672668427388346 6.164835591225057 1.0355565320982199 9.927625514722395 0.018469846862292916 0.07932201701516392 6993.180261240036 1514.8257904194631 0.008682342013206047 864261.989757114 2.1248661232365653e-05 4.672668427388346 8.892068982624176 NSKPS(ph)PVDSNR ddPTM_A549_PD325901_60min_R1 4 NSKPSPVDSNR 11 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NS(0.113)KPS(0.755)PVDS(0.132)NR;NS(0.074)KPS(0.624)PVDS(0.302)NR;NS(0.181)KPS(0.538)PVDS(0.28)NR;NS(0.295)KPS(0.489)PVDS(0.216)NR 58.817 0.0029695999999999998 56013000.0 11776.5 11257.7 12574.7 12318.900000000001 14696.999999999998 12825.600000000002 12749.800000000001 12997.9 13157.8 14032.4 14057.900000000001 True False 12972.041610598912 12206.425887901583 13428.094759813896 13079.810474748201 13664.733421897505 12721.15256591413 13235.000615958268 12738.646687844712 12604.82342348205 13146.391869215639 12328.867420370398 1.0521681488086918 0.9900687120483987 1.0891588255403977 1.0609093300116972 1.1083526942077355 1.0318184251779348 1.0734968723964629 1.0332373813021345 1.0223829159404945 1.06630977696252 1.0 13.589752653575347 -8.817345940028412 1.1515414215085964 1.0070758187182334 1.0579704372231742 0.030861021546579437 0.03423368284432007 0.34453583691752726 0.9102543453785387 0.0062240007375506294 0.006433947759276391 1.5228392432736448e-09 8.817345940028412 0.050894618504940814 NSKPSPVDS(ph)NR ddPTM_A549_MK2206_60min_R1 1 NSKPSPVDSNR 11 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 NS(0.03)KPS(0.223)PVDS(0.747)NR 41.644 0.024206000000000002 14053000.0 981.93 1115.9 1072.8 783.14 1385.2 983.91 870.14 879.78 1344.2 1776.8 1150.8 True False 1147.6557781163992 1172.6945436057308 1224.9391715727013 975.009335156491 1181.4389149633446 1088.0267031334013 1028.2331747254045 1004.4915092132512 1039.7408462463138 1375.4196459588063 865.0245995357648 1.3267319550592145 1.3556776815770144 1.4160743778039293 1.1271463674903026 1.3657864939302198 1.2577985686387598 1.1886750680584452 1.1612288364427261 1.2019783562274582 1.5900352969117373 1.0 9.75659735041267 -14.99999999987779 0.06922859316962443 0.00119717322957724 1.630524068617315 0.0 0.18865265182060378 71.41413483653524 0.37022920143842236 11.411082281841516 1.5704827510855601 1.0000000002813984e-15 14.99999999987779 1.6293268953877378 NSKS(ph)PEEHLEEMMK ddPTM_A549_MK2206_60min_R1 1 NSKSPEEHLEEMMK 14 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NS(0.219)KS(0.781)PEEHLEEMMK 59.9 0.0022199000000000003 6220500.0 1162.3 1624.1 1686.6 1267.0 2023.4 1559.3 1877.7 1867.4 2948.3 2242.5 2253.8 True False 1358.4678244932845 1706.7597529080267 1925.7852412141306 1577.4150568777911 1725.760540381772 1724.3040910204302 2218.8537846575155 2132.1096686726514 2280.514757467642 1735.9176925161112 1694.119258284417 0.8018726059869974 1.0074613959801215 1.136747151534252 0.931112168853562 1.0186771279191982 1.0178174190443834 1.3097388355672677 1.258535760246167 1.3461359029570623 1.0246726634074288 1.0 10.726319722070974 -7.629020177630812 7.513602689896614 1.1860597827980903 0.9899885580216191 0.39952729040163837 0.1237437976655334 0.2338850801775705 15.007558661511704 0.02308902623302524 0.034282407734972174 2.3495236577706178e-08 7.629020177630812 -0.1960712247764712 NSKYEYDPDIS(ph)PPR ddPTM_A549_MK2206_60min_R1 3 NSKYEYDPDISPPR 14 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 NSKYEYDPDIS(1)PPR;NSKYEYDPDIS(1)PPR;NSKYEYDPDIS(1)PPR 87.66799999999999 2.2119e-05 45717900.0 6097.999999999999 6973.700000000001 6870.3 7080.37 9116.3 7204.01 6998.53 6212.1 11215.7 11244.900000000001 10280.5 True False 7127.193318213929 7328.631542918976 7844.611847926857 8815.060967849886 7775.304346289584 7966.333556565181 8270.072310560345 7092.684198758367 8675.36185779258 8704.669280077775 7727.568122634194 0.92230740707911 0.9483748867193128 1.0151462560323266 1.1407289884679768 1.0061773927965216 1.0308978750030866 1.0702037405968827 0.9178416917456553 1.122650971187466 1.1264435514429996 1.0 12.915798751927834 -5.802186644384746 3.459062739823693 1.0494873104872864 0.9304907442542918 0.33965645035158265 0.062087377865209105 0.19533952237011545 4.7299437772303055 0.008661662998856281 0.03403378756842495 1.5769334139273989e-06 5.802186644384746 -0.1189965662329946 NSKYEYDPDIS(ph)PPR ddPTM_A549_PD325901_60min_R1 4 NSKYEYDPDISPPR 14 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 NSKYEYDPDIS(1)PPR;NSKYEY(0.001)DPDIS(0.999)PPR;NSKYEYDPDIS(1)PPR;NSKYEYDPDIS(1)PPR 120.11 6.6574e-07 99762800.0 15452.520000000002 15664.160000000002 16513.3 17778.500000000004 20464.0 21663.800000000003 19881.9 22373.799999999996 21276.0 22218.2 23238.199999999997 True False 17021.248454856017 16984.233736574293 17633.991840539704 18876.637567096976 19026.679236967444 21487.37719541 20638.51658429315 21927.537007093437 20381.84370928302 20815.339060218266 20380.048719086877 0.8351917450969985 0.8333755218488638 0.8652575900873406 0.9262312287515836 0.9335934128139773 1.0543339464780601 1.0126823968268635 1.0759315303577888 1.0000880758540318 1.0213586506652321 1.0 14.31486987986088 -6.584496843165356 1.3269649135860506 1.0102718638171664 0.8348228486723516 0.87543451241483 0.02904769823188554 0.11925640782267298 0.408137158263783 0.00460400598733677 0.01458669360712379 2.6031737534640667e-07 6.584496843165356 -0.1754490151448148 NSLDASRPAGLS(ph)PTLTPGER ddPTM_A549_MK2206_60min_R1 1 NSLDASRPAGLSPTLTPGER 20 1 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;E7ERW0;G5E9M9;E7EWF5;F8W708;E7EQU6;Q14135-5 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 NS(0.003)LDAS(0.022)RPAGLS(0.611)PT(0.116)LT(0.247)PGER 106.62 2.8707e-10 21305000.0 1884.2 2405.6 2442.7 2176.3 2657.4 1998.2 2287.8 2391.7 3228.6 2920.2 3077.4 True False 2202.206895732812 2528.03476485164 2789.1115906046234 2709.493597697818 2266.4999802364946 2209.6481977021895 2703.463646237134 2730.730799274059 2497.3272550147653 2260.524791833018 2313.196648080779 0.9520188858824201 1.0928749905240907 1.2057390766663538 1.1713200431730868 0.979812927758205 0.9552357770946529 1.1687132818907346 1.1805009321363582 1.079600066465061 0.9772298406659623 1.0 11.175672201371857 -10.252596012942412 0.9755120691204803 1.006234072606246 1.0899133852410856 0.14881735640836657 0.08796033287499438 0.8404822520669392 1.5743233394679026 0.03996808564695545 0.017052835035843896 5.58989933549384e-11 10.252596012942412 0.08367931263483963 NSLDASRPAGLS(ph)PTLTPGER ddPTM_A549_PD325901_60min_R1 1 NSLDASRPAGLSPTLTPGER 20 1 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;E7ERW0;G5E9M9;E7EWF5;F8W708;E7EQU6;Q14135-5 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 NSLDAS(0.004)RPAGLS(0.855)PT(0.141)LTPGER 166.57 2.2246999999999997e-28 33601000.0 5489.8 5421.5 6066.5 5794.1 5592.8 7224.0 5968.1 6274.4 6056.7 6523.8 6372.8 True False 6047.12045462284 5878.388831755904 6478.209170828012 6151.988397644154 5199.981022112567 7165.170139109564 6195.219311369631 6149.252169828424 5802.157961741605 6111.886154641324 5588.986000507647 1.081970943221826 1.051780918975637 1.1591027728893215 1.1007342650501128 0.9303979329417275 1.2820161185694063 1.1084692841969759 1.1002446900510912 1.0381414376802152 1.0935590380949571 1.0 12.448370845953098 -8.912018346617675 2.158292475155538 1.0144229937516127 1.1031274336221597 0.06316178491729485 0.08245742951694268 0.34553219676131114 3.168715518462442 0.01451249322252175 0.014929696732098088 1.224564466877045e-09 8.912018346617675 0.08870443987054699 NSLDASRPAGLSPT(ph)LTPGER ddPTM_A549_MK2206_60min_R1 1 NSLDASRPAGLSPTLTPGER 20 1 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;E7ERW0;G5E9M9;E7EWF5;F8W708;E7EQU6;Q14135-5 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 NSLDASRPAGLS(0.411)PT(0.588)LT(0.001)PGER 126.59 7.3704e-16 22172000.0 2269.1 2532.1 1989.7 2284.8 3145.7 2742.9 1715.3 2384.7 3777.0 2994.4 3306.8 True False 2652.068605831293 2660.9730745264546 2271.869378894674 2844.5761025685692 2682.9716970835925 3033.1518574103384 2026.9478067971645 2722.738527837459 2921.515530629613 2317.9629602988803 2485.6302969628655 1.0669602028394145 1.0705425814039347 0.9140013225903381 1.1444083643670948 1.079392901012614 1.2202747372030656 0.815466326297135 1.0953915918889108 1.1753620537210805 0.9325453439842385 1.0 11.279396016128144 -6.296345782935502 24.987821902501533 1.07914006928166 1.022505270033672 0.0 0.11561524962532611 1553.8514981795347 1112324.7732886213 0.0156300372701727 0.036321729547517397 5.054220874072739e-07 6.296345782935502 -0.056634799247987866 NSLDASRPAGLSPT(ph)LTPGER ddPTM_A549_PD325901_60min_R1 1 NSLDASRPAGLSPTLTPGER 20 1 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;E7ERW0;G5E9M9;E7EWF5;F8W708;E7EQU6;Q14135-5 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 NSLDASRPAGLS(0.411)PT(0.588)LTPGER 147.16 1.8414e-21 36802000.0 5080.8 5165.4 4891.9 4973.9 5309.3 5069.3 5134.9 4876.8 5935.8 5358.2 5320.8 True False 5596.5990757127265 5600.706385972878 5223.893751384412 5281.126506453502 4936.393084090659 5028.017301521061 5330.311429425095 4779.528398224411 5686.338968300529 5019.882337563866 4666.3753313301995 1.1993461044886324 1.2002262973510829 1.119475691616792 1.1317406191044777 1.0578645594467189 1.0774995461172583 1.1422809034749535 1.0242485995788846 1.21857728205493 1.0757562307215642 1.0 12.188086637177376 -11.072248379403835 1.3861620852175602 0.9999376866718008 1.1370129777464013 0.2144708319655717 0.0619793308989598 0.36087786259251775 1.2367897034476771 0.04580982566099547 0.010089261028240239 8.467430108493546e-12 11.072248379403835 0.13707529107460048 NSLEDNSWVFPS(ph)PPK ddPTM_A549_MK2206_60min_R1 1 NSLEDNSWVFPSPPK 15 0 Q9H6S1 Q9H6S1 AZI2 5-azacytidine-induced protein 2 1 NSLEDNS(0.003)WVFPS(0.997)PPK 79.02199999999999 0.00047294 1916800.0 317.45 309.82 398.05 358.09 595.7 497.34 465.61 464.95 794.32 801.35 526.14 True False 371.02779909265547 325.58851465178554 454.49947543299237 445.82206607527075 508.07331911901855 549.9681886924267 550.2053100465394 530.8580863496567 614.4077882683915 620.324478438254 395.4849172747193 0.9381591633112143 0.8232640498540656 1.1492207555346017 1.1272795664305582 1.2846844390935166 1.3906173526976688 1.3912169238665182 1.3422966671088037 1.5535555502401115 1.5685161464889756 1.0 8.627478865034385 -6.079695493264492 1.389664960908174 1.2929451863130057 0.8651556711661427 0.5337432657823018 0.16041763925393882 0.4102401928578937 1.3917188745864242 0.030522558747569598 0.15868319435652814 8.32347168993096e-07 6.079695493264492 -0.42778951514686303 NSLEDNSWVFPS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 NSLEDNSWVFPSPPK 15 0 Q9H6S1 Q9H6S1 AZI2 5-azacytidine-induced protein 2 1 NSLEDNSWVFPS(1)PPK;NSLEDNSWVFPS(1)PPK 132.44 2.1517e-09 3448900.0 2171.5699999999997 1787.19 2217.7 2782.3 2371.09 2395.5299999999997 1964.77 2116.7 2777.1000000000004 2224.35 2638.0 True False 2392.02618777466 1937.8027734438501 2368.206458113455 2954.1563519382335 2204.5528182164344 2376.0215979154405 2039.5403975133966 2074.4807579809744 2660.3881446253918 2083.9041613900554 2313.5427236597984 1.0339234989318495 0.8375910907659555 1.0236277177398236 1.2768972544691317 0.9528904721193336 1.0270057144900295 0.88156591043499 0.8966684456552195 1.1499196091857418 0.9007415942998116 1.0 11.175888025727819 -8.769254775893168 24.999900008373693 1.0707953609107883 0.9930029472625329 0.0 0.12505121998807064 360.39877889482347 1152840.1557189976 0.021244811885734356 0.02282105534467728 1.701160241567346e-09 8.769254775893168 -0.0777924136482554 NSLEPQT(ph)TVVHNATDGIK ddPTM_A549_MK2206_60min_R1 2 NSLEPQTTVVHNATDGIK 18 0 Q13555-9 Q13555-9 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma 1 NS(0.036)LEPQT(0.785)T(0.178)VVHNATDGIK;NS(0.006)LEPQT(0.497)T(0.497)VVHNATDGIK 74.579 0.00046793 9751200.0 3832.0 5177.7 5693.7 3910.0 6600.3 4884.700000000001 3866.4 3922.2999999999997 7161.0 6295.9 7100.1 True False 4478.747916594913 5441.222814255213 6501.152275525254 4867.95017552657 5629.404613364543 5401.595711798563 4568.874832507761 4478.298036539968 5539.044933767186 4873.651817307547 5336.949217208796 0.839196277557477 1.0195380530716296 1.21814017914252 0.9121222588796694 1.0547982347691705 1.0121130053816731 0.8560836250372391 0.8391119821975936 1.037867273667649 0.9131905924067325 1.0 12.38179956834552 -4.350995462270898 16.01765184371747 0.9977474848752133 0.9986766008057955 0.0 0.11240248326897678 0.0 0.0 0.013847924582028458 0.0 4.4566090486443276e-05 4.350995462270898 0.0009291159305822028 NSLEPQT(ph)TVVHNATDGIK ddPTM_A549_PD325901_60min_R1 2 NSLEPQTTVVHNATDGIK 18 0 Q13555-9 Q13555-9 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma 1 NS(0.004)LEPQT(0.764)T(0.231)VVHNATDGIK;NS(0.015)LEPQT(0.577)T(0.408)VVHNATDGIK 114.63 5.172300000000001e-10 14065400.0 3101.7 4094.2 3947.7 4739.4 4401.5 3919.5 3763.7 4708.0 4028.0 3890.2 4760.9 True False 3416.5823006491437 4439.232602596147 4215.614661448564 5032.141974041643 4092.3538243506737 3887.580891506083 3906.9296630756676 4614.095246645451 3858.7171677473175 3644.5721080943163 4175.339481831669 0.8182765294931975 1.0632027939076014 1.0096459652663325 1.2052054679477477 0.980124811924373 0.9310813907281738 0.9357154502229232 1.105082656565522 0.9241684860687176 0.8728804265983872 1.0 12.027677787361068 -6.970809254026743 24.99976368719068 0.9700534373340545 1.0341981596491725 0.07202735331364585 0.10031104177888092 403.9068678423578 345915.4132082312 0.013315460267970347 0.025163667639654486 1.0695245206980464e-07 6.970809254026743 0.06414472231511803 NSLESIS(ph)SIDRELSPEGPGK ddPTM_A549_MK2206_60min_R1 3 NSLESISSIDRELSPEGPGK 20 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NS(0.006)LES(0.238)IS(0.374)S(0.374)IDRELS(0.007)PEGPGK;NS(0.001)LES(0.024)IS(0.648)S(0.326)IDRELSPEGPGK;NS(0.014)LES(0.126)IS(0.429)S(0.429)IDRELS(0.001)PEGPGK 68.23100000000001 0.00034296 11532000.0 2361.25 3236.1400000000003 2598.64 2674.38 3579.2 2653.45 2780.75 2993.0699999999997 3904.8 3543.6000000000004 3582.3 True False 2759.7712729801005 3400.845703328479 2967.1662274568275 3329.603220057481 3052.70442133757 2934.2363177824413 3285.976280388981 3417.3468383924437 3020.3690346842773 2743.0982988629144 2692.716043549676 1.0249024510367712 1.262979700913918 1.1019231807098966 1.2365222200214723 1.1336896917334582 1.089693926253873 1.220320385530603 1.2691077644739406 1.1216812266259877 1.0187105712219182 1.0 11.394846385217551 -9.912553503426786 0.9121638122769151 1.0142323381239176 1.1671230520215894 0.3791701498595662 0.07480327471010613 0.3509658682383417 0.597222635875387 0.026526835899965177 0.014130027365513362 1.2230564338717976e-10 9.912553503426786 0.15289071389767184 NSLESIS(ph)SIDRELSPEGPGK ddPTM_A549_PD325901_60min_R1 2 NSLESISSIDRELSPEGPGK 20 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NS(0.025)LES(0.102)IS(0.436)S(0.436)IDRELS(0.001)PEGPGK;NS(0.001)LES(0.094)IS(0.453)S(0.453)IDRELSPEGPGK 88.22200000000001 1.3290000000000001e-06 12638600.0 2475.2 2556.2 2251.0 2077.6 2933.6 2970.2 2262.3 2846.6000000000004 2589.8999999999996 3569.3 3654.5 True False 2726.4804818540674 2771.61994498468 2403.7663963626223 2205.928633428053 2727.5540563705863 2946.0116759666703 2348.3930644780608 2789.822329885501 2481.0555096198577 3343.933788859451 3205.0196677842087 0.8506907178323247 0.8647747072643832 0.7500005134210197 0.688273041067833 0.8510256844246705 0.9191867699218821 0.7327234488085445 0.8704540436765075 0.7741155333799047 1.043342673516659 1.0 11.646117494712868 -10.823410777086606 0.841978886710834 1.0125267809193739 0.8084080223954624 0.5836306367569044 0.06766818429347143 0.4552579536641286 0.513058987673715 0.06263702442997797 0.012143761341265122 1.5017208926362157e-11 10.823410777086606 -0.20411875852391148 NSLESIS(ph)SIDRELSPEGPGKEK ddPTM_A549_MK2206_60min_R1 2 NSLESISSIDRELSPEGPGKEK 22 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NS(0.001)LES(0.06)IS(0.465)S(0.465)IDRELS(0.009)PEGPGKEK;NS(0.001)LES(0.101)IS(0.441)S(0.441)IDRELS(0.016)PEGPGKEK 71.97399999999999 7.3589e-05 9325900.0 2139.03 2408.3999999999996 2627.0 1763.1100000000001 3122.9 2116.4 2001.38 2315.7 3415.4 2832.5 2462.6 True False 2500.0459697374795 2530.9772728918742 2999.5481019029544 2195.0720291490165 2663.5255468806167 2340.356043247379 2365.004839717665 2643.9575665338234 2641.8173532730675 2192.636282743315 1851.0684556975784 1.3505961716555386 1.3673061442441743 1.6204414767429924 1.1858405465192803 1.4389125041174462 1.2643271166140702 1.2776430998206432 1.428341322761855 1.4271851184874165 1.1845246868069048 1.0 10.854142534202948 -10.761677951519339 0.839004036265054 0.9809787575103779 1.3756901143336637 0.42105091829399244 0.1201742386541163 0.35192368148411346 0.4052321518370759 0.0915683228034071 0.01930633228604371 1.7310995699304657e-11 10.761677951519339 0.39471135682328584 NSLESIS(ph)SIDRELSPEGPGKEK ddPTM_A549_PD325901_60min_R1 1 NSLESISSIDRELSPEGPGKEK 22 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NS(0.009)LES(0.066)IS(0.462)S(0.462)IDRELS(0.001)PEGPGKEK 53.201 0.0016722999999999998 5607200.0 1187.1 944.52 968.91 1307.9 1067.1 1220.3 1044.7 1156.4 1446.0 1465.8 1805.2 True False 1307.6135181031682 1024.1180151932283 1034.6660591291463 1388.6860125435853 992.1505772951502 1210.3622813891748 1084.4566301817758 1133.334694821749 1385.2296486004523 1373.2491378450077 1583.1718441056375 0.8259454101407815 0.6468773551059274 0.6535399571318475 0.8771543137997626 0.6266853348795084 0.7645173111785161 0.6849898412603498 0.7158633467625811 0.8749711244283741 0.8674037142321597 1.0 10.6286021448014 -9.130304535906802 1.0817553779396292 0.9681844653599021 0.7182141568720312 0.491875278503328 0.08241713809633575 0.18067008456431116 0.43893378861537624 0.017661965751856426 0.015715243438345766 7.407906020646162e-10 9.130304535906802 -0.24997030848787094 NSLESISSIDRELS(ph)PEGPGK ddPTM_A549_PD325901_60min_R1 2 NSLESISSIDRELSPEGPGK 20 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NSLESIS(0.004)S(0.003)IDRELS(0.993)PEGPGK;NS(0.003)LES(0.004)IS(0.003)S(0.002)IDRELS(0.988)PEGPGK 74.28699999999999 0.00011044 8874300.0 4093.1 3618.2 3548.8 4204.3 4078.1 4002.7000000000003 3876.4 3835.9 3950.6 3999.0 4493.700000000001 True False 4508.628498819039 3923.118412074003 3789.6429086680027 4463.990062341918 3791.6683246812427 3970.103338290954 4023.9185232474733 3759.389965294665 3784.5700205815674 3746.502457526389 3941.0033879113153 1.1440306071922863 0.995461821755299 0.9615934155987793 1.1327039393152563 0.9621073496947136 1.007383893774083 1.0210390926306974 0.9539169585152518 0.960306208360644 0.9506468502459194 1.0 11.944347274361318 -5.262417144327613 6.239196098792516 0.9909267095737654 1.1475492752177938 0.4282828130933729 0.049527363003178934 0.0826203600958952 17.201151264204253 0.0063339536659171546 0.05466318259127858 5.464908006739035e-06 5.262417144327613 0.15662256564402843 NSLESISSIDRELS(ph)PEGPGKEK ddPTM_A549_MK2206_60min_R1 1 NSLESISSIDRELSPEGPGKEK 22 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NSLES(0.003)IS(0.05)S(0.041)IDRELS(0.906)PEGPGKEK 71.085 9.176799999999999e-05 13498000.0 1349.9 1656.5 1521.2 1653.8 1749.8 1273.2 1597.4 1506.5 2623.0 2275.6 2377.5 True False 1577.7301181136409 1740.8087745164376 1736.9290341129695 2058.981074241903 1492.4067379460444 1407.9291789182398 1887.6269029194843 1720.0509884627545 2028.8946880702879 1761.5403795271618 1787.1011343380944 0.8828432189977875 0.9740963961511878 0.971925427575923 1.1521346132458852 0.835099205786583 0.787828484838217 1.0562507440960371 0.9624810568428328 1.1352993118779195 0.9856970854531969 1.0 10.80340556530867 -8.298126851591686 2.1650616612768547 1.0617566378344656 0.9461697274956604 0.10308341276609334 0.10202003755890293 0.39239744326489473 3.598541709095122 0.018156412486091948 0.023000643980241497 5.033535644909012e-09 8.298126851591686 -0.1155869103388052 NSLESISSIDRELS(ph)PEGPGKEK ddPTM_A549_PD325901_60min_R1 2 NSLESISSIDRELSPEGPGKEK 22 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 NSLESISSIDRELS(1)PEGPGKEK;NSLESISSIDRELS(1)PEGPGKEK 142.65 1.8088e-27 93229000.0 11166.7 10330.7 12244.2 10687.5 14054.0 14396.099999999999 13798.8 13292.4 14341.4 13497.7 14711.9 True False 12300.335163509946 11201.304344594802 13075.165042355939 11347.642601926414 13066.895523667923 14278.862934611734 14323.920884993091 13027.272654313934 13738.680831561911 12645.452918468114 12902.429566417966 0.9533348041306009 0.8681546593169709 1.0133878255291981 0.8794965741538864 1.0127468982801522 1.1066801691191792 1.1101723757729272 1.0096759364004517 1.0648134725974798 0.9800830807386306 1.0 13.655355134608005 -6.921799127458686 6.4044547164292664 1.0416762024052182 0.9309818743183909 0.5220578145086157 0.05216670790896808 0.13152851725372458 8.624827053400779 0.007293969526000108 0.01387489472628905 1.1972941830902383e-07 6.921799127458686 -0.11069432808682733 NSLESYAFNMK ddPTM_A549_MK2206_60min_R1 2 NSLESYAFNMK 11 0 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 87.184 1.7234e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSLESYAFNMK ddPTM_A549_PD325901_60min_R1 4 NSLESYAFNMK 11 0 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;;; 183.0 3.9984e-18 24599100.0 17803.8 16338.300000000001 18579.4 19838.0 23467.199999999997 21332.800000000003 20301.0 22882.100000000002 22324.6 20226.2 23497.6 False True 19611.228669535172 17715.185880268833 19840.30981100832 21063.348204633112 21818.94482944499 21159.072749667288 21073.56566413346 22425.69856483981 21386.37469788775 18949.11428017511 20607.54416355896 0.9516528759508566 0.8596456588745405 0.9627692486566465 1.0221183095596693 1.058784329480084 1.026763430990657 1.0226141211624131 1.0882276115412122 1.037793466710411 0.9195231673303164 1.0 14.330884966223785 -6.06999272757251 3.3159332388785105 1.027292929403427 0.9055355697739326 0.506163507331572 0.04447320688678086 0.0972623030404258 2.072812678134701 0.004444724719750462 0.013817941534107155 8.511522909542552e-07 6.06999272757251 -0.12175735962949441 NSLLAGGDDDT(ph)MSVISGISSR ddPTM_A549_PD325901_60min_R1 1 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDT(0.493)MS(0.493)VIS(0.01)GIS(0.002)S(0.003)R 69.331 0.00040244 3178400.0 1474.2 1100.0 1065.6 1407.6 929.52 1416.8 1127.5 1347.1 1204.4 1084.8 1033.9 True False 1623.8596987513195 1192.7008604503355 1137.9180239733496 1494.5442551084557 864.2337218699164 1405.2620505385432 1170.4076294916742 1320.2310337204942 1153.7832564138212 1016.3055428668742 906.7368544320955 1.7908830889733385 1.3153770629488135 1.2549594939383453 1.6482668017773623 0.9531251736880161 1.5498014045306259 1.2907908438603395 1.4560244543576837 1.2724565575714413 1.1208384636614372 1.0 9.824540114411306 -13.870862688121214 0.11468660194029522 1.8577089912066787e-14 1.6138099617794526 0.3049626845665311 0.2077743525829232 49.615439593561625 0.5210700261451883 12.465344061212946 0.9272905465495281 1.3462859450761255e-14 13.870862688121214 1.613809961779434 NSLLAGGDDDTMS(ph)VISGISSR ddPTM_A549_PD325901_60min_R1 1 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDT(0.374)MS(0.615)VIS(0.006)GIS(0.002)S(0.002)R 81.807 4.3027e-05 2732000.0 1068.9 1462.7 1869.4 1411.9 1833.7 1622.1 1346.2 1595.8 1327.2 1527.2 1744.8 True False 1177.4139411174096 1585.9668623460966 1996.2687256154097 1499.109856342447 1704.90723792158 1608.890155405541 1397.4303776689057 1563.9705171191188 1271.422399462324 1430.772331366418 1530.2006611984912 0.7694506811905504 1.0364437178480421 1.3045797039794 0.9796818772567429 1.1141723312197855 1.051424297611673 0.913233416442523 1.022068906893674 0.8308860606990682 0.9350226853553976 1.0 10.579505136229663 -7.756581643036941 23.734776326629394 0.9269073854921351 1.0546425524939793 0.13152511293797065 0.1269139345344995 86.25811865759802 421449.7058506693 0.02006199647626814 0.029209498153123816 1.7515331324735152e-08 7.756581643036941 0.12773516700184417 NSLLAGGDDDTMSVIS(ph)GISSR ddPTM_A549_MK2206_60min_R1 1 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDT(0.002)MS(0.025)VIS(0.706)GIS(0.133)S(0.133)R 119.79 6.6876999999999995e-18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSLLAGGDDDTMSVISGISS(ph)R ddPTM_A549_PD325901_60min_R1 1 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDT(0.031)MS(0.248)VIS(0.182)GIS(0.248)S(0.291)R 47.397 0.0155 1276500.0 897.73 891.11 987.82 1012.7 974.52 987.4 687.59 1246.0 719.62 960.36 1231.6 True False 988.8668887261033 966.2069670508165 1054.8594054442144 1075.2521789914283 906.0730771114885 979.3589417714269 713.7566137136856 1221.1475525319097 689.37687394596 899.7227057039373 1080.1210077556525 0.9155149114087104 0.8945358530323059 0.9766122479518028 0.995492330276641 0.8388625631809418 0.9067122431091348 0.6608117133068051 1.1305655049421652 0.638240409172666 0.8329832483986597 1.0 10.07697723363373 -6.779875393365597 24.082041856906915 0.8422552312344765 0.944115281649231 0.08306989986342384 0.13272458673123777 312.7413182059386 408518.1394860207 0.0225645073022432 0.042707243405541016 1.6600631400794854e-07 6.779875393365597 0.10186005041475443 NSLVIDT(ph)PR ddPTM_A549_MK2206_60min_R1 1 NSLVIDTPR 9 0 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 NSLVIDT(1)PR 83.397 0.0015222999999999999 2002300.0 689.29 721.85 725.63 671.88 865.26 762.14 702.15 783.92 956.11 986.88 1079.4 True False 805.6253004774816 758.5890817293631 828.5352452165356 836.4906301618396 737.9814002029907 842.7891489324126 829.7215662231853 895.0430606543139 739.5526115939316 763.9431225820731 811.3551900755167 0.9929378776790695 0.9349654639649961 1.0211745180793381 1.0309795763850151 0.9095663763909654 1.0387425374748267 1.0226366656334067 1.1031457881855762 0.9115029035866498 0.9415643505170272 1.0 9.664189816646022 NSLVTGGEDDRMS(ph)VNSGSSSSK ddPTM_A549_MK2206_60min_R1 2 NSLVTGGEDDRMSVNSGSSSSK 22 1 Q68DW7;Q8WVM7-2;Q8WVM7 Q68DW7 DKFZp781D1416;STAG1 Cohesin subunit SA-1 1 NSLVT(0.004)GGEDDRMS(0.987)VNS(0.006)GS(0.002)S(0.001)SSK;NSLVT(0.005)GGEDDRMS(0.977)VNS(0.01)GS(0.002)S(0.002)S(0.002)S(0.002)K 61.911 0.00030936 14575900.0 2984.9 3566.1 3567.9 3148.0 4769.8 3686.5 3574.6000000000004 3527.6 4942.2 5002.6 5219.7 True False 3488.678146201502 3747.599257955367 4073.881870110218 3919.2601413190914 4068.168738515854 4076.6029830993484 4224.058549628139 4027.6481028219137 3822.799591071662 3872.509185543408 3923.504433608647 0.8891740038108703 0.9551663114876384 1.0383273267677338 0.9989182394562374 1.0368711970013378 1.0390208682266961 1.0766034857626139 1.0265435329500776 0.974332935200901 0.9870026276436914 1.0 11.937927115127232 -5.4527334423442975 3.2778830143319557 1.006041973996308 0.8908465337968862 0.6096072081783133 0.030377485810417302 0.17066351877530922 3.223910613819926 0.004983301564903257 0.03777124900846027 3.5258721269095333e-06 5.4527334423442975 -0.11519544019942185 NSLVTGGEDDRMS(ph)VNSGSSSSK ddPTM_A549_PD325901_60min_R1 1 NSLVTGGEDDRMSVNSGSSSSK 22 1 Q68DW7;Q8WVM7-2;Q8WVM7 Q68DW7 DKFZp781D1416;STAG1 Cohesin subunit SA-1 1 NSLVT(0.002)GGEDDRMS(0.805)VNS(0.083)GS(0.022)S(0.025)S(0.029)S(0.034)K 46.783 0.008875 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSNPALNDNLEK ddPTM_A549_PD325901_60min_R1 1 NSNPALNDNLEK 12 0 O00299 O00299 CLIC1 Chloride intracellular channel protein 1 0 172.99 1.0841e-36 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSNS(ph)DGGEGGEGTK ddPTM_A549_MK2206_60min_R1 1 NSNSDGGEGGEGTK 14 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 NS(0.012)NS(0.988)DGGEGGEGTK 75.462 0.00085447 2071600.0 626.39 629.78 830.04 457.54 0.0 0.0 171.83 226.64 184.57 909.23 976.55 True False 732.1093182348346 661.8331119921295 947.7521532179389 569.6373205397509 0.0 0.0 203.0492867964537 258.7669140558902 142.76518969772513 703.8343115123406 734.0456835911109 0.9973620642426461 0.9016238727190632 1.2911351083509266 0.7760243446333769 0.0 0.0 0.2766166893088895 0.3525215389728147 0.1944908782778843 0.9588426541370426 1.0 9.519726042270209 -6.524686878246098 24.970566191439886 0.477655785382552 1.0449289213866455 0.4364561761069371 0.3275762883512761 55.25264581428455 763047.8516961455 0.05743319424962141 0.12022266209501051 2.987535824514434e-07 6.524686878246098 0.5672731360040935 NSNS(ph)DGGEGGEGTK ddPTM_A549_PD325901_60min_R1 2 NSNSDGGEGGEGTK 14 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 NS(0.005)NS(0.995)DGGEGGEGTK;NS(0.162)NS(0.832)DGGEGGEGT(0.006)K 94.461 5.371e-05 8343900.0 1397.5 1320.91 1371.31 1027.82 1489.08 1289.8899999999999 1180.34 1213.92 1315.27 1560.69 1539.9699999999998 True False 1539.3731712148747 1432.2277214340481 1464.375342956921 1091.306107051416 1384.4921578471203 1279.385563501666 1225.2584846068312 1189.7074132981822 1259.9937758746325 1462.1477670509785 1350.5634526741399 1.1398007018232932 1.0604668137570372 1.0842699319735267 0.8080376415418397 1.0251218890203204 0.9472976341603644 0.9072202288465584 0.8808970885022397 0.9329393397843118 1.0826205641474302 1.0 10.399345707335941 -6.047258562860879 24.854384965943154 0.9508874951818034 1.0931925078750369 0.4562429750854502 0.07139281276645867 209.69449814588117 110283.00675966009 0.008333467879698261 0.02204897603830421 8.968946576296237e-07 6.047258562860879 0.14230501269323348 NSNS(ph)DGGEGGEGTKK ddPTM_A549_MK2206_60min_R1 2 NSNSDGGEGGEGTKK 15 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 NS(0.304)NS(0.696)DGGEGGEGTKK;NS(0.108)NS(0.892)DGGEGGEGTKK 74.66199999999999 0.00029921 14627800.0 6824.7 6317.9 5040.1 3091.9 968.5999999999999 458.43000000000006 511.08 607.81 811.69 9748.3 9169.2 True False 7976.5425121047265 6639.4541240672515 5754.861967415712 3849.415638800666 826.1202230966608 506.9407583187941 603.9366204733259 693.9689288400576 627.8435110025815 7546.152259511611 6892.234582953885 1.1573231317216899 0.9633238747398675 0.8349776691653584 0.5585148898328526 0.11986246451039988 0.07355245272303669 0.08762566236021667 0.10068852423514513 0.0910943328242753 1.0948774550092966 1.0 12.75075609038989 -11.00802701771442 1.3303354893095205 0.9956078227366157 0.3955881621396757 0.2613124720278732 0.3807280572922696 0.556172783488147 1.7733199517584215 0.29380761241700887 0.0688821210131604 9.816868698044023e-12 11.00802701771442 -0.6000196605969401 NSNS(ph)DGGEGGEGTKK ddPTM_A549_PD325901_60min_R1 2 NSNSDGGEGGEGTKK 15 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 NS(0.054)NS(0.946)DGGEGGEGTKK;NS(0.007)NS(0.993)DGGEGGEGTKK 128.29 1.3592000000000002e-09 51270000.0 10590.0 9361.3 8376.400000000001 8497.4 10118.2 8361.3 6058.1 7110.8 9124.9 10709.5 13374.900000000001 True False 11665.08900405404 10150.209604485204 8944.872875385105 9022.265099004406 9407.532537895035 8293.208344980185 6288.644310619524 6968.969515685311 8741.412185694513 10033.3003423053 11729.872090476674 0.9944770850080087 0.8653299478624343 0.7625720729424942 0.7691699474139587 0.8020149295176786 0.7070160936975033 0.5361221556478173 0.5941215268104522 0.7452265564593452 0.8553631501618165 1.0 13.517899660994207 -10.488100780614753 0.9779868739713694 0.9895095326698107 0.7491041223918309 0.2042312306377012 0.12284103968908194 0.4500707794742705 0.8156280172670786 0.06777171057310498 0.023124738115453458 3.2501186769896194e-11 10.488100780614753 -0.2404054102779798 NSNS(ph)PPS(ph)PSSMNQR ddPTM_A549_PD325901_60min_R1 6 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 2 NS(0.004)NS(0.996)PPS(0.609)PS(0.315)S(0.075)MNQR;NS(0.04)NS(0.96)PPS(0.723)PS(0.189)S(0.089)MNQR;NS(0.01)NS(0.99)PPS(0.597)PS(0.329)S(0.075)MNQR;NS(0.002)NS(0.998)PPS(0.917)PS(0.067)S(0.016)MNQR;NS(0.045)NS(0.949)PPS(0.952)PS(0.038)S(0.016)MNQR;NS(0.004)NS(0.996)PPS(0.94)PS(0.049)S(0.011)MNQR 113.52 8.1957e-15 33415500.0 1234.64 1726.1499999999999 1823.06 1934.48 1885.25 2130.3 1678.23 2330.67 2485.06 1931.1200000000003 1921.7800000000002 True False 1359.9797439060703 1871.6187184239527 1946.7838145503522 2053.9684360771575 1752.8365437594239 2112.951543098714 1742.0959610126931 2284.1829584747566 2380.6215702289355 1809.1887536329984 1685.413243167145 0.8069117466707831 1.1104806052828322 1.1550780334988069 1.2186734881811192 1.040004017332616 1.2536697167088589 1.0336313471342096 1.355265818478104 1.4124853829648267 1.073439265395388 1.0 10.718886651008907 -4.750715742801138 1.2696019088316837 1.1939382931147777 3.810993817090982e-12 0.39177349958847574 0.12804115698837717 4.0880652679004434 2.2742110383260856 0.023430788020333295 8.745700166064708 1.775351114842485e-05 4.750715742801138 -1.1939382931109668 NSNS(ph)PPSPSSMNQR ddPTM_A549_MK2206_60min_R1 6 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NS(0.007)NS(0.842)PPS(0.063)PS(0.044)S(0.044)MNQR;NS(0.005)NS(0.897)PPS(0.001)PS(0.049)S(0.049)MNQR;NS(0.003)NS(0.982)PPS(0.002)PS(0.006)S(0.006)MNQR;NS(0.005)NS(0.995)PPSPSSMNQR;NS(0.007)NS(0.988)PPS(0.004)PSSMNQR;NS(0.004)NS(0.971)PPS(0.014)PS(0.005)S(0.005)MNQR 95.428 1.7767e-05 42717400.0 3682.88 4934.259999999999 4871.99 4376.9 6762.74 4885.24 4655.08 5340.700000000001 7053.15 6272.030000000001 7292.4 True False 4304.460106228884 5185.3927580715235 5562.911441564588 5449.240696486507 5767.949904547509 5402.192854240138 5500.847779668482 6097.76058020779 5455.622786566123 4855.174066885987 5481.4958199987905 0.785271073367312 0.9459813394645018 1.0148528110281065 0.9941156347516305 1.0522583787264077 0.9855326049015085 1.003530415839977 1.1124263851411886 0.9952799319232769 0.8857388979796865 1.0 12.420353921939599 -5.271645236998894 2.148340590209077 1.0093462951025776 0.72721548510914 0.6043596716632069 0.05136316523430436 0.22203297580727607 1.1514772958848103 0.004908316871984496 0.11896999125580278 5.350012084538239e-06 5.271645236998894 -0.28213080999343754 NSNS(ph)PPSPSSMNQR ddPTM_A549_PD325901_60min_R1 6 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NS(0.002)NS(0.922)PPS(0.029)PS(0.023)S(0.023)MNQR;NS(0.006)NS(0.978)PPS(0.005)PS(0.006)S(0.006)MNQR;NS(0.005)NS(0.995)PPSPSSMNQR;NS(0.001)NS(0.999)PPSPSSMNQR;NS(0.349)NS(0.651)PPSPSSMNQR;NS(0.001)NS(0.999)PPS(0.001)PSSMNQR 105.9 7.244299999999999e-06 48777900.0 6983.18 5833.35 7033.24 7461.91 8046.21 8579.19 8035.280000000001 7698.74 9110.369999999999 7893.17 8849.630000000001 True False 7692.107292854593 6324.946876643604 7510.557960707888 7922.81523347282 7481.0719675175815 8509.323921061377 8341.066977473936 7545.182591155307 8727.492831065083 7394.7938991431765 7761.181612426644 0.9911000253541993 0.8149463821999159 0.9677080547480714 1.0208259037241674 0.9639088918547439 1.096395413223788 1.074716118499124 0.9721693123472983 1.1245056831412437 0.9527922767975389 1.0 12.922060599009262 -6.422793699025459 1.2009709927613497 1.054939820841639 0.9025771492979586 0.2731782219771963 0.06822372179893227 0.35848344827298123 0.9525821414316262 0.009995788281655043 0.039722139533801736 3.777515899687555e-07 6.422793699025459 -0.15236267154368033 NSNSGNSALNNATPNT(ph)PR ddPTM_A549_MK2206_60min_R1 2 NSNSGNSALNNATPNTPR 18 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 NSNSGNSALNNAT(0.001)PNT(0.999)PR;NSNSGNSALNNAT(0.054)PNT(0.946)PR 116.84 5.0718e-10 6656900.0 1157.45 1631.6 2128.9 1569.15 2538.1 1649.47 2130.3 1622.73 2504.8999999999996 2388.18 2552.3999999999996 True False 1352.7992630644014 1714.641470872936 2430.8100320293856 1953.5918204418201 2164.7488522007397 1824.0158205704283 2517.347934950156 1852.7569469022014 1937.5441495033406 1848.6884793369552 1918.5686373436615 0.7051086089562105 0.8937086938140137 1.266991435550069 1.0182548502130473 1.1283145205573282 0.9507170007197941 1.3120968861638067 0.9656975053378444 1.0098904525959267 0.9635769309231187 1.0 10.905814663355212 -5.52376718973279 24.997772996475714 1.0425810646358953 0.7522585454491812 0.4496190955628433 0.11933050496449818 16.205104474900985 455984.6938444385 0.015206196715848533 0.05995179159404803 2.993869116314094e-06 5.52376718973279 -0.29032251918671403 NSNSGNSALNNATPNT(ph)PR ddPTM_A549_PD325901_60min_R1 1 NSNSGNSALNNATPNTPR 18 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 NSNSGNSALNNAT(0.002)PNT(0.998)PR 170.89 2.9488999999999996e-30 4746400.0 822.11 845.1 1158.3 1187.2 1134.7 1117.9 1101.1 1207.5 1166.9 1234.3 1689.5 True False 905.5700019946058 916.319542878708 1236.909203423734 1260.5306476731735 1055.0025865024895 1108.796193038564 1143.0029630450388 1183.415465234575 1117.8592510040578 1156.366087353044 1481.7022106229085 0.6111686919964192 0.6184235511759726 0.834789335236084 0.8507314348564315 0.7120206603855749 0.7483259355956724 0.7714120656974114 0.798686441006973 0.754442588389005 0.7804308308799154 1.0 10.533039811640077 -14.999999999997648 0.18425826282926616 2.105428203876409 0.6922263150137759 0.1537420379525103 0.09479922831946523 23.170049276325532 0.26086390751359995 9.221874587888383 0.07759820002329355 1.0000000000054154e-15 14.999999999997648 -1.4132018888626332 NSNSNSDS(ph)DEDEQR ddPTM_A549_PD325901_60min_R1 2 NSNSNSDSDEDEQR 14 0 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 NSNS(0.001)NS(0.007)DS(0.992)DEDEQR;NS(0.002)NS(0.016)NS(0.027)DS(0.955)DEDEQR 105.46 2.1299e-05 7200800.0 417.29 473.44 619.1700000000001 772.03 532.91 496.55 659.67 588.09 619.01 591.14 625.83 True False 459.65297360733797 513.3384503378244 661.1905995716772 819.7165396926553 495.48024003969505 492.5062614306279 684.774102835275 576.3600836023198 592.9951623652601 553.8153195154165 548.8568774632347 0.8374732876297573 0.9352865408381632 1.204668515092019 1.4934978012506805 0.902749442313192 0.8973309466521507 1.2476369176610067 1.0501099781535077 1.080418569420189 1.009034125754421 1.0 9.100286184008242 -10.57743942023318 0.7791014345353967 0.9977547304776713 1.0790421019699508 0.019022259049008672 0.18091879356188695 2.929144040397312 3.0499612206559132 0.1431513203549335 0.03562161330180114 2.6458217348384896e-11 10.57743942023318 0.08128737149227949 NSNSPPS(ph)PSSMNQR ddPTM_A549_MK2206_60min_R1 3 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NS(0.004)NS(0.054)PPS(0.677)PS(0.132)S(0.132)MNQR;NSNSPPS(0.994)PS(0.005)S(0.001)MNQR;NSNS(0.028)PPS(0.834)PS(0.11)S(0.028)MNQR 139.64 8.842300000000001e-10 68036000.0 1425.35 1968.83 2128.54 2245.48 2860.24 2307.09 2020.9199999999998 2295.85 3228.48 3400.25 3367.17 True False 1665.9142335382458 2069.035037447147 2430.3989786161055 2795.622700803428 2439.5024849370175 2551.224732477603 2388.0950047878096 2621.293768245747 2497.234434823165 2632.131163423814 2531.0087598356276 0.6582016862108513 0.817474467208686 0.9602491374917027 1.1045488048745375 0.9638459272244665 1.0079873183225523 0.9435348635233094 1.0356715511391523 0.9866557850180431 1.0399533992899945 1.0 11.305496785295018 -5.543488274496259 2.1793663477517504 0.9987376534769011 0.6501836206074115 0.8691964521069862 0.04211367314816143 0.08745839139123143 0.6818335796722337 0.005268687598956198 0.04677030650748581 2.860959602547308e-06 5.543488274496259 -0.3485540328694896 NSNSPPS(ph)PSSMNQR ddPTM_A549_PD325901_60min_R1 2 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NSNSPPS(0.995)PS(0.005)SMNQR;NSNSPPS(0.994)PS(0.005)S(0.001)MNQR 265.56 1.6152999999999997e-83 50067000.0 4374.5 4168.299999999999 4397.7 4830.5 5340.4 4947.6 4845.6 5339.1 5184.6 5457.1 5376.5 True False 4818.596019663307 4519.577269650123 4696.154367518396 5128.869014138531 4965.308727379831 4907.308385971551 5030.001959614062 5232.607462057076 4966.709291932162 5112.537774685487 4715.22458444159 1.0219229080970613 0.9585073178832186 0.9959556079288102 1.0877252869485383 1.0530375888697692 1.0407369358744358 1.0667576632958513 1.1097260307224068 1.0533346191654103 1.0842617744136465 1.0 12.203110772241962 -6.030690775541653 22.862659143968543 1.041170919551635 0.9869691991948528 0.34907838093272714 0.03489524903994559 224.6141539220443 167323.89473668486 0.0053988909959055845 0.014313325909365534 9.317710749028468e-07 6.030690775541653 -0.05420172035678217 NSPAS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 NSPASPLK 8 0 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 NS(0.006)PAS(0.994)PLK;NS(0.006)PAS(0.994)PLK 85.355 0.0029933000000000004 13717200.0 6454.700000000001 7439.1 7394.5 7383.6 9707.2 7279.3 7774.3 8877.2 10240.0 10332.4 10341.3 True False 7544.095557736218 7817.718415034849 8443.15129026318 9192.582331462403 8279.283739050083 8049.590694391731 9186.789677830815 10135.570285284817 7920.656349919837 7998.303663836552 7773.269804639558 0.9705176518166712 1.0057181355481526 1.0861775678008496 1.182588867039674 1.065096664225974 1.035547574791145 1.1818436653707276 1.3039004871843372 1.0189606882283064 1.0289497039022986 1.0 12.924305876684114 -8.9635394013892 24.999996029166923 1.0083647427936586 1.1054376593199644 0.1623050734132212 0.08878050205876856 204.94704012965897 140527.13099488395 0.016008448022833126 0.0169918453533739 1.0875784625429838e-09 8.9635394013892 0.09707291652630579 NSPAS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 NSPASPLK 8 0 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 NS(0.042)PAS(0.958)PLK;NS(0.008)PAS(0.992)PLK 108.47 0.0017477999999999999 14603800.0 9854.400000000001 10875.7 9126.5 10528.7 12511.6 11263.6 10629.099999999999 10203.1 11345.7 10729.0 11660.2 True False 10854.811433574148 11792.233407272468 9745.879172102828 11179.033886587385 11632.828378676799 11171.872976034681 11033.5962169667 9999.591166322893 10868.879684734553 10051.569108977403 10226.0693200978 1.0614842412852268 1.153154065178945 0.9530425491003439 1.0931897229189202 1.1375659615189802 1.0924894626010453 1.0789674772966604 0.9778528634330887 1.0628599654975353 0.9829357492445857 1.0 13.319964090407495 -10.949936226689864 0.2426411772830149 0.9555316559850047 1.0857599748611122 0.24312553063973896 0.055363576869315985 7.993286569262324 0.5692469636191764 0.3093265806157114 0.04380345828428592 1.1221832274864803e-11 10.949936226689864 0.13022831887610753 NSPAS(ph)PLKELSGK ddPTM_A549_MK2206_60min_R1 3 NSPASPLKELSGK 13 1 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 NS(0.004)PAS(0.996)PLKELSGK;NS(0.001)PAS(0.999)PLKELSGK;NS(0.006)PAS(0.994)PLKELSGK 123.14 1.7586000000000002e-06 58924100.0 6692.1 8705.5 8515.5 7818.8 11502.7 9882.300000000001 8882.9 9531.599999999999 13576.9 11687.3 12245.8 True False 7821.562873863468 9148.572765803108 9723.125946613853 9734.406350999268 9810.668067534552 10928.038426660167 10496.807947879992 10882.733489300763 10501.753827854172 9047.130812817624 9204.829893113541 0.8497237824802233 0.9938883034272561 1.0563069670508596 1.0575324545955946 1.0658174220986159 1.1872069938886995 1.140358710564877 1.1822851280980782 1.1408960241308648 0.982867789831304 1.0 13.168175345223784 -4.972379977395522 1.048202781364369 1.0902979695348234 0.5924398326623983 0.5715880542342795 0.06312874640169225 1.901882000032076 1.0964181360373866 0.010742069576096722 1.2160090923676126 1.0656633321024534e-05 4.972379977395522 -0.4978581368724251 NSPAS(ph)PLKELSGK ddPTM_A549_PD325901_60min_R1 3 NSPASPLKELSGK 13 1 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 NS(0.004)PAS(0.996)PLKELSGK;NSPAS(1)PLKELSGK;NS(0.012)PAS(0.988)PLKELSGK 101.3 5.4352e-05 98603000.0 11722.1 11696.2 13266.900000000001 13112.199999999999 16291.1 13766.1 13223.7 14861.400000000001 14699.7 14082.6 15232.6 True False 12912.118962646071 12681.879821817465 14167.271614350639 13922.110814033167 15146.869337243961 13653.993445735914 13726.935139786296 14564.97771845724 14081.922728583728 13193.422232648443 13359.086767407229 0.9665420389474791 0.9493073922356746 1.0604970130828983 1.0421453993396894 1.1338252083367306 1.0220753621458754 1.0275354430122068 1.0902674690302991 1.0541081867167772 0.9875991123013764 1.0 13.705533767513757 -5.756528995225715 24.99657390786705 1.040313899701654 0.9579246834984327 0.4250309448170497 0.03918398626085548 91.14198909950456 463947.1582043995 0.005506376775559538 0.02003278542156782 1.751745476813996e-06 5.756528995225715 -0.08238921620322137 NSPAT(ph)PPNTLNLR ddPTM_A549_PD325901_60min_R1 1 NSPATPPNTLNLR 13 0 H0YAJ5;G5E9Y1;Q92870-2;Q92870;Q92870-4;D6RDY3;D6RB00;D6RB55 H0YAJ5 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 NS(0.001)PAT(0.865)PPNT(0.135)LNLR 77.42 0.00097201 4198500.0 3010.2 3217.1 3037.1 2844.2 3432.6 3730.3 3151.8 3594.1 3210.3 3490.7 3699.3 True False 3315.7932880078833 3488.216307413431 3243.215869565937 3019.8797743531336 3191.5060178271315 3699.921673577021 3271.7434737311382 3522.412855983095 3075.3822551189705 3270.2966062734104 3244.3095517948072 1.022033574500784 1.075179865461263 0.9996628921465692 0.9308235623454872 0.9837242614723789 1.1404342324640881 1.0084560124422017 1.085720335790534 0.9479312026244896 1.0080100416016797 1.0 11.663695763752793 -8.782409856135146 24.994763226050335 0.9754119587311987 1.0292128519266028 0.11209691620567752 0.054941226234450205 322.7861120536149 384728.0526962227 0.009789612763796232 0.010427316610132444 1.6504035299960395e-09 8.782409856135146 0.053800893195404154 NSPFQIPPPS(ph)PDSK ddPTM_A549_MK2206_60min_R1 4 NSPFQIPPPSPDSK 14 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 NSPFQIPPPS(1)PDSK;NSPFQIPPPS(0.98)PDS(0.02)K;NSPFQIPPPS(0.999)PDS(0.001)K;NSPFQIPPPS(0.982)PDS(0.018)K 142.91 5.6498e-13 36560900.0 19401.800000000003 25228.699999999997 27714.100000000002 24724.6 36674.3 28605.3 28421.7 26822.5 44291.100000000006 37246.9 38265.1 True False 22676.349511532153 26512.733069509708 31644.37611379848 30782.12810992948 31279.55905215145 31632.29385933862 33585.55499355624 30624.671515461192 34259.23656835301 28832.79942090447 28762.819606965557 0.7883910486314273 0.9217710026971437 1.100183380704967 1.070205512900234 1.0874997472284118 1.0997633156826585 1.1676725527083842 1.0647312027797422 1.19109451147329 1.0024329956136138 1.0 14.811917489040011 -5.541110270669546 2.301786923554435 1.0957705442908154 0.7804295848853869 0.7325594749152902 0.05624949959337922 0.16319835412416692 1.4536436063306555 0.009628709057560775 0.08095429153716913 2.876667914154002e-06 5.541110270669546 -0.3153409594054285 NSPFQIPPPS(ph)PDSK ddPTM_A549_PD325901_60min_R1 3 NSPFQIPPPSPDSK 14 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 NSPFQIPPPS(0.998)PDS(0.002)K;NSPFQIPPPS(1)PDSK;NSPFQIPPPS(0.983)PDS(0.017)K 150.76 1.6489000000000002e-13 55296300.0 36714.9 39208.7 41576.9 41965.6 51836.8 46948.2 47027.8 51510.3 48764.7 46208.0 48000.8 True False 40442.16961991913 42512.95475194461 44398.558456210194 44557.7198012073 48195.96199525184 46565.869424826065 48817.46866359961 50482.88665745137 46715.289242812236 43290.41899409337 42097.00590214153 0.9606899292061477 1.0098807228896516 1.0546725949921198 1.0584534183924132 1.1448786193319285 1.1061563269623695 1.1596422980076169 1.1992037337478016 1.1097057437150362 1.0283491204748871 1.0 15.361430006576494 -5.605838565447164 1.5161874979879466 1.0818559272614658 0.9506226529537593 0.3646532292496394 0.05658789196895715 0.729151929060497 2.385895130416925 0.010280283093006479 0.11744441994700587 2.4783431281981433e-06 5.605838565447164 -0.1312332743077066 NSPFQIPPPS(ph)PDSKK ddPTM_A549_MK2206_60min_R1 1 NSPFQIPPPSPDSKK 15 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 NSPFQIPPPS(0.964)PDS(0.036)KK 53.778999999999996 0.0071682000000000004 1838600.0 1662.2 1563.0 1446.1 1327.3 2329.7 1732.7 1795.0 1515.3 2356.4 2157.8 2485.1 True False 1942.7387231117093 1642.5500238872264 1651.1787248427333 1652.4885595847607 1987.0042161349274 1916.053163926826 2121.1282651436545 1730.0984154116252 1822.6791623975687 1670.3514813428158 1867.9810847291683 1.0400205542731071 0.8793183385608927 0.8839376042622679 0.8846388076913256 1.0637175249678805 1.0257347783607924 1.135519134794231 0.9261862604259002 0.9757481900100891 0.8942014964701818 1.0 10.86726413098076 -6.748693042300895 24.999486038738166 1.0020073233384021 0.9162144140639538 0.21935771349637911 0.0732301205543391 236.8844262644821 464600.0865043615 0.009247648623099545 0.019153122191789784 1.7836389913356222e-07 6.748693042300895 -0.08579290927444838 NSPFQIPPPS(ph)PDSKK ddPTM_A549_PD325901_60min_R1 3 NSPFQIPPPSPDSKK 15 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 NSPFQIPPPS(0.819)PDS(0.181)KK;NSPFQIPPPS(0.961)PDS(0.039)KK;NSPFQIPPPS(0.975)PDS(0.025)KK 69.737 0.0008917999999999999 6257900.0 6431.6 6059.0 7087.6 7305.799999999999 7890.200000000001 8039.5 7409.6 7818.2 7651.1 7324.9 7591.6 True False 7084.531297306322 6569.613194062345 7568.607157201121 7757.06267332435 7336.019571712301 7974.028977487732 7691.576382688701 7662.25986774075 7329.550874416957 6862.404563924748 6657.881327117413 1.0640819427722708 0.986742309044237 1.1367891353626776 1.1650947639649258 1.1018549612521396 1.1976826539412284 1.1552588586043235 1.1508555787157881 1.1008833763022852 1.0307189670044608 1.0 12.70084744016504 -10.18224014257594 0.8479776202993965 1.006264614113815 1.1192625618945764 0.33845665674568215 0.054663160688957955 0.464660172304184 0.6560642063124822 0.028258533030563984 0.011506094113789061 6.572942868206445e-11 10.18224014257594 0.11299794778076144 NSPLDCGSAS(ph)PNK ddPTM_A549_MK2206_60min_R1 2 NSPLDCGSASPNK 13 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 NSPLDCGS(0.007)AS(0.993)PNK;NSPLDCGS(0.012)AS(0.988)PNK 162.7 9.6984e-19 15297900.0 5618.4 7864.6 6333.6 7929.4 9918.9 8337.900000000001 6137.3 7803.5 11913.8 9359.2 9832.900000000001 True False 6566.648563308159 8264.874547577403 7231.799717629439 9872.103355964287 8459.842949487378 9220.211043749916 7252.367967502035 8909.670022216473 9215.343322429202 7244.950219753306 7391.1195557657475 0.8884511356856045 1.1182168662296967 0.9784444241587157 1.3356709063464067 1.144595603637331 1.2474715060666703 0.9812272569511511 1.205456082125761 1.2468129155400272 0.9802236542232068 1.0 12.851577195071009 -4.618622989582309 1.2503780521476084 1.1349923950742289 0.15879925909060713 0.2399502297609869 0.12051558035182644 6.81318057033887 2.8400670151652747 0.017814667666750817 12.725674074786301 2.4064509301300517e-05 4.618622989582309 -0.9761931359836218 NSPLDCGSAS(ph)PNK ddPTM_A549_PD325901_60min_R1 2 NSPLDCGSASPNK 13 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 NSPLDCGS(0.007)AS(0.993)PNK;NSPLDCGS(0.029)AS(0.971)PNK 162.7 9.6984e-19 30331000.0 13842.5 16169.800000000001 16602.3 18041.3 16140.5 14890.7 14600.900000000001 17082.1 16798.8 16004.4 18107.1 True False 15247.7804096901 17532.485793918037 17729.031915740186 19155.67012623485 15006.846961702151 14769.435076195856 15156.545239419045 16741.384114851793 16092.804855400616 14993.879452672007 15880.041490364056 0.9601851745124463 1.104057933636803 1.1164348611115462 1.2062733046294893 0.9450130826678409 0.9300627511053978 0.9544399017229253 1.0542405777094723 1.0133981617847576 0.9441964910337439 1.0 13.954927061417239 -6.782831725053357 24.999979686893084 0.9967534458872134 1.098667687814012 0.4204128333714868 0.06492715439269262 189.19119701757847 221096.188138351 0.009068990166583711 0.017149730263341656 1.6488011244313006e-07 6.782831725053357 0.10191424192679865 NSPLDELEEGEIRS(ph)DSETSKPQESFEK ddPTM_A549_MK2206_60min_R1 2 NSPLDELEEGEIRSDSETSKPQESFEK 27 2 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 NSPLDELEEGEIRS(0.993)DS(0.005)ET(0.001)S(0.001)KPQESFEK;NSPLDELEEGEIRS(0.938)DS(0.052)ET(0.008)S(0.001)KPQESFEK 136.33 3.5578000000000004e-25 42569000.0 2783.3 3359.7 3393.8 2636.7 4476.6 3432.8 2881.7 3755.6 4412.7 4386.6 4564.3 True False 3253.052994848283 3530.6943795610464 3875.091872188142 3282.69161836596 3818.098070116162 3796.0566174917813 3405.267588671013 4287.967801042632 3413.2304956339135 3395.6640133739866 3430.858341728439 0.9481746754980915 1.029099434569575 1.1294817466103546 0.9568135117791445 1.1128696348892781 1.1064451631014758 0.992541005629357 1.2498236225289292 0.9948619720376899 0.9897418299303137 1.0 11.74435384369523 NSPLDELEEGEIRS(ph)DSETSKPQESFEK ddPTM_A549_PD325901_60min_R1 2 NSPLDELEEGEIRSDSETSKPQESFEK 27 2 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 NSPLDELEEGEIRS(0.999)DS(0.001)ETSKPQESFEK;NSPLDELEEGEIRS(0.999)DS(0.001)ETSKPQESFEK 270.58 4.7873999999999986e-139 63130000.0 7113.4 6465.7 7386.5 6736.1 9743.8 8074.5 8626.1 9563.4 9701.599999999999 8512.9 8642.2 True False 7835.547131391697 7010.58723037612 7887.792308632834 7152.173598206931 9059.429102285152 8008.743949091941 8954.37095588304 9372.650484657835 9293.875490222792 7975.394041179395 7579.264187419536 1.0338136971656897 0.9249693713029113 1.0407068698997732 0.9436501250449203 1.1952913737091355 1.056665099810781 1.181430114383132 1.2366174674601074 1.2262239790571305 1.052264948676334 1.0 12.887842079669507 -6.754565152933381 24.999842577193796 1.126091471573981 0.985364019435009 0.45697610739216654 0.07807964495525713 153.5730791003161 558501.5532929397 0.014109566540505715 0.028865308081364793 1.759684655801918e-07 6.754565152933381 -0.14072745213897198 NSPLEPDTST(ph)PLKK ddPTM_A549_MK2206_60min_R1 2 NSPLEPDTSTPLKK 14 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 NSPLEPDT(0.034)S(0.164)T(0.802)PLKK;NSPLEPDT(0.007)S(0.031)T(0.962)PLKK 102.08 1.7399e-05 23015000.0 4510.700000000001 5954.4 6104.7 5509.700000000001 8270.4 5694.9 5442.200000000001 5792.4 7966.799999999999 7548.5 7786.299999999999 True False 5271.995883973041 6257.453526701282 6970.438255685935 6859.576747339836 7053.835115732634 6297.5305380313275 6430.977295022173 6613.490438481026 6162.3325203653685 5843.288607339064 5852.746819052243 0.9007729271341955 1.0691481658375535 1.1909686974661726 1.172026906240006 1.2052178803925928 1.0759957217918936 1.0987964273608481 1.1299806130264103 1.0528957959201894 0.9983839704662449 1.0 12.51489815588135 -9.212931026513035 1.0268941889862186 1.0124000572092564 1.1124979931530632 0.19874424673577118 0.07884692383986745 0.5114826518476152 1.129846944028553 0.020332538204244636 0.017192222014130672 6.12447651297711e-10 9.212931026513035 0.10009793594380678 NSPQSS(ph)PTSTPK ddPTM_A549_MK2206_60min_R1 2 NSPQSSPTSTPK 12 0 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 NSPQS(0.192)S(0.747)PT(0.059)S(0.001)TPK;NSPQS(0.169)S(0.826)PT(0.004)STPK 147.26 5.9978e-12 13155000.0 1982.2 2202.66 2645.7 2411.24 3556.3 3383.3 2978.4 2706.6 4149.9 3724.6 3641.6 True False 2316.7468998628506 2314.765985678464 3020.900043092744 3001.9939082446754 3033.172981002123 3741.3185603472234 3519.5367269659423 3090.268838614866 3209.954276028551 2883.2102731529562 2737.2902169529375 0.8463650969540883 0.8456414198766202 1.1036097029037395 1.09670282297885 1.1080933114861866 1.3667964533596066 1.2857740495210537 1.128951844227483 1.172675902667627 1.0533082152912716 1.0 11.418532686979965 -5.773585464473489 5.429025635270843 1.1233161810053582 0.8423912122735623 0.5668782443651235 0.09967854970672699 0.10697846221592745 9.507782202240742 0.016448677188113398 0.05813861471003538 1.6842809458211524e-06 5.773585464473489 -0.28092496873179595 NSPQSS(ph)PTSTPK ddPTM_A549_PD325901_60min_R1 2 NSPQSSPTSTPK 12 0 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 NSPQS(0.141)S(0.853)PT(0.006)S(0.001)TPK;NSPQS(0.169)S(0.784)PT(0.044)S(0.003)TPK 174.39 7.2765e-16 20497500.0 3637.1 3696.5 4010.1 3945.6 5826.7 5433.6 5078.6 5746.700000000001 6339.7 5958.8 6836.7 True False 4006.335714508495 4008.0170278678793 4282.249500690246 4189.310750892243 5417.452693023759 5389.35056310434 5271.868902116557 5632.0775603010625 6073.264455900615 5582.5603510648325 5995.829241412036 0.6681870935945786 0.6684675074108647 0.7142047126882092 0.6987041462017434 0.9035368545198816 0.8988499081796951 0.8792560111126541 0.9393325482656159 1.0129148465326112 0.9310739392821872 1.0 12.549743581210699 -6.949784947830035 0.5749618651597034 1.0082629577686135 0.6253295413734826 0.8787686568087412 0.04415816780941096 0.18683924499082116 0.1053107241877583 0.008055852705586503 0.033777827284642396 1.1225741884049191e-07 6.949784947830035 -0.3829334163951309 NSPTFKS(ph)FEEK ddPTM_A549_MK2206_60min_R1 4 NSPTFKSFEEK 11 1 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RK35 H0YC42 TPD52 Tumor protein D52 1 NS(0.006)PT(0.323)FKS(0.671)FEEK;NSPTFKS(1)FEEK;NS(0.037)PT(0.06)FKS(0.903)FEEK;NS(0.002)PT(0.212)FKS(0.785)FEEK 97.417 7.7828e-05 48474700.0 12113.1 17707.0 14418.6 13417.5 20796.399999999998 17476.4 11580.599999999999 17223.7 19751.3 17989.5 17491.3 True False 14157.495143138272 18608.210667287993 16463.374290863303 16704.788102334453 17737.277108824484 19325.74104810456 13684.645118285574 19665.21222036904 15277.662086344904 13925.659455749634 13147.727474678406 1.0768016883833809 1.415317643533918 1.2521840236322663 1.2705456615606532 1.3490755070018927 1.4698921228268969 1.0408372963800196 1.49571188315569 1.1620002099806679 1.0591685508061732 1.0 13.6825258372923 -9.465928537137398 0.9678316822345127 1.0301986640956908 1.2982797511889694 0.32874245419345616 0.14070346831569203 0.3219681377906352 0.6356886918705731 0.03697202206219771 0.02685954493389609 3.4203571962921086e-10 9.465928537137398 0.2680810870932786 NSPTFKS(ph)FEEK ddPTM_A549_PD325901_60min_R1 2 NSPTFKSFEEK 11 1 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RK35 H0YC42 TPD52 Tumor protein D52 1 NSPT(0.001)FKS(0.998)FEEK;NS(0.015)PT(0.019)FKS(0.966)FEEK 85.734 0.00011241 90172000.0 7789.0 8212.5 7902.1 5807.3 11908.1 9211.900000000001 9479.400000000001 9499.5 10220.0 9885.6 10493.0 True False 8579.73354604126 8904.596196771261 8438.384025187504 6166.003731664773 11071.716136714813 9136.88134059571 9840.143754326717 9310.025020286417 9790.488941007347 9261.421528912948 9202.427520607382 0.9323337268159192 0.9676355697266645 0.9169737013729342 0.670040999275135 1.2031299471711627 0.9928772946198281 1.0692986967070668 1.0116922952599288 1.0639028581407564 1.0064107006736493 1.0 13.167798766481738 -6.772403156552513 24.99999994657713 1.0395214138024758 0.8818257694208023 0.4691402033517371 0.0903830104286047 151.44325188550778 345326.7247251505 0.012380286782874714 0.023557001280562637 1.6888724196318358e-07 6.772403156552513 -0.1576956443816735 NSPTFKS(ph)FEEKVENLK ddPTM_A549_MK2206_60min_R1 1 NSPTFKSFEEKVENLK 16 2 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RK35 H0YC42 TPD52 Tumor protein D52 1 NS(0.036)PT(0.163)FKS(0.801)FEEKVENLK 42.309 0.016403 7886400.0 1644.6 1962.7 1495.7 1398.2 1789.2 1414.0 1320.8 1123.7 1944.6 2259.3 2195.0 True False 1922.1682733903954 2062.5930466304944 1707.8127506723429 1740.7590627675843 1526.0110501389074 1563.6285414627648 1560.7722632878783 1282.9879161869217 1504.1512048880973 1748.9225608480033 1649.9209210818578 1.1650063035324287 1.25011630574273 1.0350876389594026 1.055056057854072 0.9248995092069611 0.9476990815035481 0.9459679208531252 0.7776057020633831 0.9116504831648665 1.060003869580143 1.0 10.688181163983465 -6.105084951186595 1.3159292695188236 0.940065215485601 1.217813608962161 0.6333229917107068 0.0743251426854815 0.227951296975058 0.6848409390158624 0.010456358758318494 0.05535109951926741 7.850820517809968e-07 6.105084951186595 0.27774839347656 NSPTFKS(ph)FEEKVENLK ddPTM_A549_PD325901_60min_R1 2 NSPTFKSFEEKVENLK 16 2 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RK35 H0YC42 TPD52 Tumor protein D52 1 NS(0.028)PT(0.205)FKS(0.767)FEEKVENLK;NSPT(0.013)FKS(0.987)FEEKVENLK 102.48 2.3263e-07 28162000.0 6106.299999999999 5455.0 5284.9 4534.7 7412.8 7683.5 7337.9 8644.2 7510.700000000001 7191.6 9539.9 True False 6726.2070807795235 5914.711994324167 5643.565094685392 4814.798119949071 6892.150500771713 7620.928123456304 7617.147799952948 8471.78464975629 7195.0513981628055 6737.521148673865 8366.552778408693 0.8039400765076915 0.7069473116321077 0.6745388745110851 0.5754817124173858 0.8237742213923607 0.9108803022343205 0.9104284645894171 1.0125776857129456 0.8599780087123641 0.805292373946553 1.0 13.030417604700363 -7.043272266600901 3.4214994906754392 0.9351252294315107 0.6900132683501458 0.6568241090844815 0.0752215608760041 0.09995409586446652 2.379566099736881 0.010818277758299421 0.02015260323805591 9.051649596688124e-08 7.043272266600901 -0.2451119610813649 NSPTFKS(ph)FEER ddPTM_A549_MK2206_60min_R1 2 NSPTFKSFEER 11 1 E9PNK6;E9PPQ1;J3KNE7;Q16890-5;Q16890 E9PNK6 TPD52L1 Tumor protein D53 1 NSPT(0.001)FKS(0.999)FEER;NS(0.005)PT(0.026)FKS(0.969)FEER 87.566 8.5669e-05 16727200.0 3032.5 5476.7 3954.3 3270.0 5137.7 4721.6 3323.1 4625.9 5636.0 5316.799999999999 4416.8 True False 3544.311862493236 5755.440637122957 4515.079200363477 4071.150146795878 4381.951135870037 5221.23657805558 3926.864255096872 5281.635491224597 4359.454998842598 4115.731187322029 3319.986662521345 1.067568102759042 1.7335734212715241 1.359969077988562 1.2262549704654735 1.319870102291974 1.5726679377953712 1.1827951899405034 1.59086045460601 1.3130941301829913 1.2396830486651294 1.0 11.696961730465322 -10.187024021134555 0.7109357506808758 1.0034675186163724 1.3875431390105117 0.16220041579463873 0.19697199459361778 0.5184060660424145 0.5005448507310398 0.10305007677564587 0.03602281887831303 6.500937322051478e-11 10.187024021134555 0.38407562039413934 NSPTFKS(ph)FEER ddPTM_A549_PD325901_60min_R1 2 NSPTFKSFEER 11 1 E9PNK6;E9PPQ1;J3KNE7;Q16890-5;Q16890 E9PNK6 TPD52L1 Tumor protein D53 1 NSPT(0.001)FKS(0.999)FEER;NSPT(0.001)FKS(0.999)FEER 103.6 5.8305e-05 54357000.0 5107.5 6611.3 5966.9 5801.3 10861.8 7448.0 7298.1 7621.6 7597.7 9025.5 8526.0 True False 5626.0096400572265 7168.457453359369 6371.849715884557 6159.633125291764 10098.904639175767 7387.345957376534 7575.833189173553 7469.581208970464 7278.3950907134595 8455.628389698533 7477.35605076704 0.7524062786177075 0.9586887938316132 0.8521527760111037 0.8237715421696281 1.3505983359104325 0.9879623101027438 1.013170048040766 0.9989602151156386 0.9733915358981506 1.130831316883879 1.0 12.868312516440211 NSPVTKT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 NSPVTKTPPR 10 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 NSPVT(0.006)KT(0.993)PPR;NSPVT(0.003)KT(0.997)PPR 84.365 0.00036047 75662000.0 12476.5 12618.2 12886.7 14377.7 14940.099999999999 13997.4 13573.0 13015.400000000001 15573.1 14324.7 14757.6 True False 13743.105095286139 13681.579997576757 13761.2689560223 15265.777874874142 13890.758916546969 13883.409815223182 14089.527942430586 12755.797636616222 14918.616763914051 13420.235997331398 12942.508756134142 1.061857894341586 1.0571041716384646 1.0632613209166348 1.1795068608811161 1.0732663333114147 1.072698506666499 1.088624176958954 0.985573807749643 1.1526835364776806 1.03691148680667 1.0 13.659829673790556 -11.126098575532325 1.4866181223290071 1.000040854366542 1.0900661941338772 0.168224222990483 0.049644682513397785 0.41787682010157795 1.6544417211403006 0.03683218279732327 0.00795398274512042 7.479997013529403e-12 11.126098575532325 0.09002533976733518 NSQEDS(ph)EDS(ph)EDKDVK ddPTM_A549_MK2206_60min_R1 4 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 NSQEDS(1)EDS(1)EDKDVK;NS(0.001)QEDS(0.999)EDS(1)EDKDVK;NSQEDS(1)EDS(1)EDKDVK;NS(0.017)QEDS(0.983)EDS(1)EDKDVK 244.01 2.1954e-65 1773442000.0 98761.29999999999 119177.7 117376.3 106463.8 159440.0 126933.1 114221.9 124125.5 147129.9 171882.7 166930.2 True False 115429.79295803916 125243.33588088627 134022.0243141954 132547.4357793417 135986.58720889108 140365.07639062725 134974.54071777832 141720.66974340097 113805.2125681711 133054.27869228012 125476.8243008561 0.9199291869331412 0.9981391908723319 1.0681018192877632 1.0563499396632192 1.0837585981841213 1.1186534021141112 1.0756929932666253 1.1294569378293873 0.906981932339155 1.0603892745424888 1.0 16.937061395952966 -8.769030041780995 24.999957604762567 0.9560748021825921 1.0583647397516867 0.12018237907725404 0.0658824008273542 140.78026035746393 463659.9969921857 0.011182682775113556 0.012017760639143586 1.7020407677680948e-09 8.769030041780995 0.10228993756909455 NSQEDS(ph)EDS(ph)EDKDVK ddPTM_A549_PD325901_60min_R1 8 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 NSQEDS(1)EDS(1)EDKDVK;NS(0.001)QEDS(0.999)EDS(1)EDKDVK;NS(0.569)QEDS(0.861)EDS(0.57)EDKDVK;NS(0.12)QEDS(0.881)EDS(0.999)EDKDVK;NSQEDS(1)EDS(1)EDKDVK;NS(0.005)QEDS(0.995)EDS(1)EDKDVK;NS(0.172)QEDS(0.901)EDS(0.927)EDKDVK;NS(0.001)QEDS(0.999)EDS(1)EDKDVK 179.58 1.2218e-28 4317316800.0 83479.07999999999 84422.29000000001 89903.6 93653.2 111415.9 97361.7 95338.45 99213.09999999999 110481.99999999999 103142.40000000001 105427.20000000001 True False 91953.81474754927 91536.85265835255 96004.99893026496 99437.94546215067 103590.43154798866 96568.81859536878 98966.60688595149 97234.21688932848 105838.82575150428 96629.97126160786 92460.32275808443 0.9945218879252629 0.9900122552876215 1.0383372679917517 1.0754661296426866 1.1203771353797383 1.0444352314022733 1.0703683908273853 1.0516318133967 1.1446945305222838 1.045096625007821 1.0 16.496546778254334 -5.940116247146786 2.9310213083966605 1.0709169544143295 0.9914768636118607 0.39308008977062436 0.03661378391898802 0.27101998204447236 4.6631952353262704 0.007292391041725639 0.026897848562346435 1.1478463375527054e-06 5.940116247146786 -0.07944009080246883 NSQEDS(ph)EDS(ph)EDKDVKTK ddPTM_A549_PD325901_60min_R1 4 NSQEDSEDSEDKDVKTK 17 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 NS(0.007)QEDS(0.993)EDS(1)EDKDVKTK;NS(0.051)QEDS(0.949)EDS(1)EDKDVKTK;NS(0.257)QEDS(0.745)EDS(0.996)EDKDVKT(0.002)K;NS(0.004)QEDS(0.996)EDS(0.999)EDKDVKT(0.001)K 106.69 4.018e-09 58076100.0 6890.27 7355.5 8622.9 8712.4 9521.8 17302.1 12669.5 14543.5 13266.3 11829.499999999998 11831.4 True False 7589.765138051315 7975.373799129496 9208.101847710017 9250.545160703972 8853.021616426731 17161.197434092963 13151.644755516418 14253.418483344962 12708.763545800959 11082.583351164905 10376.212805424015 0.7314581225708744 0.7686208782225905 0.8874241517961752 0.8915145953703247 0.8532035514729365 1.6538979833877536 1.2674802456481604 1.3736628913291171 1.2247978895688836 1.068075950155113 1.0 13.340992352742603 -7.044160824623928 24.999957290672192 1.181594631405203 0.8273630925821627 0.590138872981013 0.17462630004536697 326.00315506336585 184553.68919233387 0.02912368116703316 0.05044556803367092 9.03314903085165e-08 7.044160824623928 -0.35423153882304037 NSQEDS(ph)EDSEDK ddPTM_A549_MK2206_60min_R1 2 NSQEDSEDSEDK 12 0 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NS(0.009)QEDS(0.945)EDS(0.046)EDK;NSQEDS(0.97)EDS(0.03)EDK 68.83 0.0039700000000000004 3323300.0 1687.8 2136.4 2175.3 1161.31 459.64 168.78500000000003 185.96 189.74 500.08000000000004 1698.69 1805.63 True False 1972.6593772518002 2245.133634697808 2483.7902497409564 1445.8310021331874 392.02756488142614 186.64571666958471 219.74652489477114 216.63622605437982 386.8126784636637 1314.9547492085587 1357.2422381471692 1.4534320564210879 1.6541878609397964 1.8300272272189873 1.0652711516751459 0.28884126492894896 0.1375183526003309 0.16190663591103438 0.15961500457731068 0.2849989984040864 0.9688430791865578 1.0 10.406462518009036 -6.512304081777119 3.8941658548935507 0.5174282475989531 1.6358241730652339 0.7522840734937677 0.30516397377309434 0.10772131325201387 3.6415722997599795 0.054731062520612196 0.12636196357760462 3.073943765058542e-07 6.512304081777119 1.1183959254662807 NSQEDS(ph)EDSEDK ddPTM_A549_PD325901_60min_R1 2 NSQEDSEDSEDK 12 0 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.996)EDS(0.003)EDK;NSQEDS(0.709)EDS(0.291)EDK 93.823 0.00026342 9128200.0 1542.9 1663.08 1940.42 1759.33 2220.2 1336.1599999999999 1799.78 1653.65 1932.33 1873.21 1361.67 True False 1699.5340721770515 1803.2335881797667 2072.1085698933634 1867.9998183716684 2064.2608112741937 1325.2787559624364 1868.2716127774058 1620.6666534866717 1851.120889958585 1754.9352009159804 1194.1932223373155 1.4231650627280112 1.5100015260934212 1.735153517148391 1.5642358233415157 1.7285819184553337 1.1097691153937015 1.5644634200157 1.3571226357445305 1.5501016546849162 1.469557160508047 1.0 10.221820570473048 -12.323664002484492 0.32141312308331477 0.27443394393077974 1.5498471628549408 0.009941802031550373 0.21765165697564248 4.724110982651484 0.27326684966846826 2.494749000860194 0.058172385476677996 4.746090306422531e-13 12.323664002484492 1.2754132189241612 NSQEDS(ph)EDSEDKDVK ddPTM_A549_MK2206_60min_R1 6 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.961)EDS(0.039)EDKDVK;NSQEDS(0.99)EDS(0.01)EDKDVK;NS(0.036)QEDS(0.914)EDS(0.05)EDKDVK;NS(0.028)QEDS(0.971)EDSEDKDVK;NS(0.005)QEDS(0.927)EDS(0.068)EDKDVK;NS(0.001)QEDS(0.994)EDS(0.004)EDKDVK 284.72 1.2994999999999997e-106 1938233000.0 20103.539999999997 26425.97 24732.670000000002 22648.489999999998 35375.9 27199.89 23425.38 25716.450000000004 33168.67 38263.4 34886.950000000004 True False 23496.526067636343 27770.938998556077 28240.134508371564 28197.37106672936 30172.151972171374 30078.164305974293 27681.46832296985 29361.83554082513 25656.019204482014 29619.67136491458 26223.557484162535 0.8960083345605128 1.0590073072781245 1.0768994452955867 1.0752687191186356 1.150574325790601 1.1469902328903967 1.055595463723326 1.1196740014606306 0.9783576930771777 1.1295062228991277 1.0 14.678575794194382 -8.774686020298992 24.804994182797067 0.9897800127762707 1.0768129668011912 0.0 0.0771191091123972 200.82907319978958 376061.2877578397 0.01115801862637692 0.011913696937575598 1.6800181734773576e-09 8.774686020298992 0.0870329540249205 NSQEDS(ph)EDSEDKDVK ddPTM_A549_PD325901_60min_R1 8 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.995)EDS(0.005)EDKDVK;NSQEDS(0.999)EDS(0.001)EDKDVK;NS(0.01)QEDS(0.702)EDS(0.288)EDKDVK;NSQEDS(0.987)EDS(0.013)EDKDVK;NSQEDS(0.996)EDS(0.003)EDKDVK;NSQEDS(1)EDSEDKDVK;NS(0.015)QEDS(0.973)EDS(0.012)EDKDVK;NS(0.079)QEDS(0.907)EDS(0.013)EDKDVK 260.08 5.450099999999999e-78 5007225400.0 44825.33999999999 46358.58 48073.35 53694.990000000005 62416.78999999999 56733.99 53316.52 55200.82000000001 56510.16 57033.909999999996 58437.22000000001 True False 49375.97551812876 50265.38023205067 51335.89661953758 57011.607582129895 58032.849996635865 56271.96719553443 55345.509344519196 54099.79634089446 54135.23449457495 53432.779189132 51249.81240405871 0.9634371952202199 0.9807914970644833 1.0016796981577254 1.1124256832911816 1.1323524374898974 1.0979936229206175 1.0799163303890675 1.0556096462239937 1.0563011249244636 1.0425946297688382 1.0 15.645259103304518 -6.022835487819173 12.809198248797932 1.0504893609016717 0.9768768857390474 0.467796792614942 0.038762358856454585 1.6017198888824271 900.1041186352354 0.00700315821367232 0.019028306827326934 9.48777795393806e-07 6.022835487819173 -0.07361247516262426 NSQEDSEDS(ph)EDKDVK ddPTM_A549_MK2206_60min_R1 2 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.172)EDS(0.828)EDKDVK;NSQEDS(0.004)EDS(0.996)EDKDVK 233.89 1.0054e-55 1818448000.0 21581.4 25380.6 25920.4 22993.5 34163.2 25290.3 26015.1 27609.2 34151.0 36780.9 35903.7 True False 25223.81270542836 26672.36413069236 29596.302482133735 28626.908532217447 29137.838535717376 27966.50275965752 30741.706925091203 31522.888649628883 26415.85302794066 28472.06914455555 26987.820398290067 0.9346368966879047 0.9883111617410314 1.0966540478388889 1.0607343649741805 1.0796662385363855 1.0362638533576969 1.1390955798356721 1.1680412936061393 0.9788064629930008 1.0549969847272114 1.0 14.72002084551489 NSQEDSEDS(ph)EDKDVK ddPTM_A549_PD325901_60min_R1 2 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.03)EDS(0.97)EDKDVK;NSQEDS(0.125)EDS(0.875)EDKDVK 188.6 1.3022999999999997e-33 273440000.0 6361.3 5268.5 5534.5 5187.299999999999 6518.7 7275.1 6357.4 5987.0 6380.4 6396.6 5887.1 True False 7007.094493058452 5712.494984802362 5910.1044516521215 5507.707739786937 6060.84900029416 7215.853997651721 6599.334335902761 5867.584588289358 6112.2539764386775 5992.717584349415 5163.024021401671 1.35716867944305 1.1064242508117401 1.1446982286260274 1.0667600454610495 1.1738951775492117 1.3976022516534297 1.2781916776965057 1.1364627714237152 1.1838515472913307 1.1606991483108569 1.0 12.33400059503648 -10.38310596844862 0.6754413603383049 0.9941973716171537 1.2040166125538914 0.11075730085418045 0.10733899088934311 0.6894369351656354 0.5537934328992669 0.0777258642386446 0.02117425322153597 4.13898670654924e-11 10.38310596844862 0.20981924093673765 NSQPNRYT(ph)NR ddPTM_A549_MK2206_60min_R1 4 NSQPNRYTNR 10 1 P50750;P50750-2 P50750 CDK9 Cyclin-dependent kinase 9 1 NSQPNRY(0.001)T(0.999)NR;NSQPNRY(0.002)T(0.998)NR;NSQPNRY(0.001)T(0.999)NR;NS(0.001)QPNRY(0.011)T(0.988)NR 63.76 0.0025277 1047696000.0 4356.67 5621.76 4495.81 5774.61 7090.81 5747.31 5375.55 6065.16 7974.820000000001 8085.849999999999 8119.540000000001 True False 5091.969385644978 5907.883571521597 5133.383460988318 7189.389709232089 6047.761242139208 6355.4865294443825 6352.217852753746 6924.915003773489 6168.536003170677 6259.250869133284 6103.234130096125 0.8343067424753668 0.9679922882834824 0.8410923375321123 1.1779639378047024 0.9909109028468414 1.0413309392973074 1.040795374608003 1.134630403514345 1.0106995523492268 1.0255629614908288 1.0 12.575358220288802 -6.228791980983238 24.99990440190423 1.0278063456190034 0.8898166265609566 0.5500354471980657 0.06627032668123038 433.07275015720177 331627.09958001325 0.008879787340161207 0.023491864392687793 5.90483843276627e-07 6.228791980983238 -0.1379897190580468 NSQPNRYT(ph)NR ddPTM_A549_PD325901_60min_R1 6 NSQPNRYTNR 10 1 P50750;P50750-2 P50750 CDK9 Cyclin-dependent kinase 9 1 NSQPNRYT(1)NR;NSQPNRYT(1)NR;NSQPNRY(0.003)T(0.997)NR;NSQPNRY(0.001)T(0.999)NR;NS(0.003)QPNRY(0.01)T(0.986)NR;NSQPNRY(0.004)T(0.996)NR 93.766 0.00023454 1444091500.0 5419.18 6264.41 7203.97 7445.009999999999 7687.380000000001 7544.17 7812.800000000001 8336.64 8583.49 7405.19 7672.7300000000005 True False 5969.331164210537 6792.333815648805 7692.874725190777 7904.871358855505 7147.44494882129 7482.732780781596 8110.1203793282 8170.359175232435 8222.755765190526 6937.62503962237 6729.032851442857 0.8871009097437499 1.0094071415021217 1.1432363156826097 1.1747410858843588 1.0621801240409634 1.1120071704178305 1.2052430948660338 1.214195168252229 1.2219818132448828 1.0309988363535463 1.0 12.71618344912709 -5.488900895399553 2.695730896518039 1.124951413378223 0.88535506289709 0.5195181328252471 0.07123827146733387 0.24832533217282476 3.105502518575565 0.012670995441365743 0.10403164581589028 3.244136390496751e-06 5.488900895399553 -0.23959635048113304 NSS(ph)EASSGDFLDLK ddPTM_A549_MK2206_60min_R1 1 NSSEASSGDFLDLK 14 0 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 NS(0.261)S(0.736)EAS(0.003)SGDFLDLK 274.08 1.5459999999999998e-84 23719000.0 4298.1 6232.3 5499.3 5300.5 7676.3 7125.6 6054.1 7402.6 8259.8 7221.1 6700.6 True False 5023.514201543998 6549.49744969441 6279.183432354363 6599.122737948485 6547.126438733122 7879.626262409526 7154.051604460282 8451.941219511717 6388.968488190225 5589.848494728243 5036.656092847883 0.9973907507160263 1.3003662209525841 1.2466968791597435 1.3102190453938924 1.2998954699388998 1.564455884450538 1.420397079447042 1.6780858299048018 1.2684940902085102 1.1098332686771886 1.0 12.298250510579493 -9.9638144634486 1.06122392394298 1.0375113548417039 1.35011774653034 0.2941676590126171 0.16956136149226836 0.367056837561302 0.8364003021384037 0.05932615770121129 0.03324897172766525 1.0868898586814746e-10 9.9638144634486 0.31260639168863613 NSS(ph)EKLPTELSKEEPSTK ddPTM_A549_MK2206_60min_R1 1 NSSEKLPTELSKEEPSTK 18 2 P38432 P38432 COIL Coilin 1 NS(0.15)S(0.849)EKLPT(0.001)ELSKEEPSTK 85.805 1.0192e-05 22540000.0 1764.6 2565.9 2222.8 1981.2 2937.2 2044.1 1814.7 1412.2 2981.8 3054.1 3299.4 True False 2062.4213396720725 2696.4933501549813 2538.026463993104 2466.5940889394487 2505.1417708853137 2260.405305236235 2144.4075001427245 1612.3836746811182 2306.4270609561495 2364.176688835429 2480.0679211924744 0.8315987324574612 1.0872659281276638 1.0233697401209727 0.9945671519163285 1.0101101463708233 0.9114287902846546 0.8646567627517409 0.6501369018578518 0.9299854416274074 0.9532709441678024 1.0 11.27616391665558 -7.259823314279318 24.999931077176385 0.9277749796208481 0.9969965487384709 0.12991237762519703 0.10599477116231416 328.32696145831426 5079091.087406419 0.01718843571405045 0.02879161285197572 5.497644912026401e-08 7.259823314279318 0.06922156911762278 NSS(ph)LQAESDFQR ddPTM_A549_MK2206_60min_R1 1 NSSLQAESDFQR 12 0 Q9NVE5;Q9NVE5-3 Q9NVE5 USP40 Ubiquitin carboxyl-terminal hydrolase 40 1 NS(0.005)S(0.989)LQAES(0.006)DFQR 95.264 1.9692000000000002e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSS(ph)PAPPQPAPGK ddPTM_A549_MK2206_60min_R1 2 NSSPAPPQPAPGK 13 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 NS(0.262)S(0.738)PAPPQPAPGK;NS(0.018)S(0.982)PAPPQPAPGK 164.2 6.6447e-19 93936000.0 4323.1 5567.9 4908.7 4746.5 6838.200000000001 5031.299999999999 5098.1 5894.9 6832.6 6933.7 6700.2 True False 5052.733590352685 5851.282327576256 5604.827471568721 5909.3927130784805 5832.309838508768 5563.708826493353 6024.358779124722 6730.520127374112 5285.027009420145 5367.37235433621 5036.355423887321 1.0032519878139818 1.1618088548365262 1.1128736953284015 1.1733470368374643 1.1580417479763745 1.1047093301050213 1.196174271289775 1.336387041996958 1.0493753050774337 1.0657254904764828 1.0 12.298164384674095 -8.976298306528843 24.983903100501195 1.0217830996841861 1.1572656118303792 0.31681497756347365 0.07671474003582616 118.07067693296945 124459.41066327995 0.0131961408836249 0.01362865303019476 1.0560918556998673e-09 8.976298306528843 0.1354825121461931 NSS(ph)PAPPQPAPGK ddPTM_A549_PD325901_60min_R1 2 NSSPAPPQPAPGK 13 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 NS(0.003)S(0.997)PAPPQPAPGK;NS(0.004)S(0.996)PAPPQPAPGK 172.85 8.9062e-22 126821000.0 10741.2 11011.7 12576.7 10878.3 13828.7 10972.9 11681.3 12085.9 11314.900000000001 12060.7 12580.099999999999 True False 11831.638716746484 11939.694604564509 13430.230491840859 11550.227884588172 12857.419818425116 10883.540340453397 12125.838263752627 11844.837243294862 10839.374101624666 11299.185343708064 11032.827451824352 1.072403132235159 1.082197166293052 1.2172972477349928 1.0468964492577344 1.1653784920110444 0.9864688256910725 1.0990689663824604 1.0735994281625638 0.9824656597735789 1.0241423055918153 1.0 13.429514946361422 -8.140402181639704 0.7715880157724925 0.9901628146411622 1.1136601607096517 0.3217856822421684 0.05767212432366726 0.3804258139336466 0.45595483358694605 0.011753683459578229 0.01711466798674808 7.237654012942746e-09 8.140402181639704 0.1234973460684895 NSS(ph)PEDRYEEQERS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NSSPEDRYEEQERSPR 16 2 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 2 NS(0.039)S(0.961)PEDRYEEQERS(1)PR;NS(0.083)S(0.917)PEDRY(0.001)EEQERS(0.999)PR 88.329 1.0342e-05 27282000.0 1177.37 2398.5 1814.08 1573.0 3691.0 2558.2 2338.9 2439.2 3840.0 2421.2 2319.6099999999997 True False 1376.0812720671584 2520.5734051781933 2071.3438221165256 1958.385070614654 3148.058789438136 2828.9070260042745 2763.8478547880213 2784.96406973671 2970.246131219939 1874.249238403569 1743.5868190208155 0.7892244062959565 1.445625407167122 1.1879785964886886 1.1231933215200993 1.8055073341320973 1.6224641039629826 1.5851506931786605 1.5972614838306265 1.7035263738045494 1.074938866225275 1.0 10.767842487177818 -4.93970460788358 1.945989077858188 1.4051938154465224 6.529495587464935e-20 0.30591093497083144 0.26607106195825725 3.081817505033606 5.408385296680898 0.0446213269712878 10.553792493387624 1.1489348216029477e-05 4.93970460788358 -1.4051938154465224 NSS(ph)PEDRYEEQERS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NSSPEDRYEEQERSPR 16 2 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 2 NS(0.018)S(0.982)PEDRYEEQERS(1)PR;NS(0.216)S(0.783)PEDRY(0.001)EEQERS(1)PR 138.54 7.5906e-11 43978000.0 4118.6 4719.5 5231.6 4794.7 6197.9 4633.4 5746.9 5097.3 5286.6 5106.4 4720.7 True False 4536.717240046928 5117.228828086692 5586.647836166459 5090.857729446228 5762.5808855942405 4595.667126598872 5965.6014243243435 4995.630352745509 5064.422586646719 4783.981032536325 4140.08382698287 1.0958032324077622 1.236020583625701 1.3494045216562167 1.2296508820103396 1.3918995668727274 1.1100420471312082 1.4409373514235915 1.2066495659306802 1.2232657111045673 1.1555275768468443 1.0 12.015444263871743 -10.286667122704122 0.6317137388982684 0.9915966375776842 1.2647939100205443 0.2398500120897813 0.11018477625904721 0.5196865305206397 0.37191297195207373 0.07262950496606901 0.020712974206343278 5.168123429457416e-11 10.286667122704122 0.2731972724428601 NSS(ph)PNSSPR ddPTM_A549_MK2206_60min_R1 2 NSSPNSSPR 9 0 K7EQL6;Q8NFA0;P35125-2;P35125 K7EQL6 USP32;USP6 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32;Ubiquitin carboxyl-terminal hydrolase 6 1 NS(0.223)S(0.685)PNS(0.091)S(0.001)PR;NS(0.236)S(0.731)PNS(0.032)S(0.001)PR 86.87899999999999 0.0011629000000000001 21194200.0 2647.95 2141.8999999999996 1750.67 859.74 1675.77 1142.08 1343.79 1212.12 1563.0900000000001 3491.0 3304.0 True False 3094.8592238380734 2250.913561205407 1998.941330627501 1070.3763385951959 1429.2664528790954 1262.9341475486522 1587.939248700497 1383.941721961816 1209.0526107418173 2702.3806753952013 2483.5256142389358 1.2461555484244433 0.9063379690147422 0.8048804969704598 0.4309906579816804 0.575498978019233 0.5085247119288006 0.6393891166639379 0.5572488216055377 0.4868291286427201 1.0881227316124673 1.0 11.278173910980192 -5.402592967487383 1.8293830583216661 0.6821439830744837 1.331679110525722 0.42698595135394646 0.1989230291895424 0.5282624209692972 2.21406519140931 0.031418977847944445 0.5308826811942049 3.957373420359212e-06 5.402592967487383 0.6495351274512383 NSS(ph)PNSSPR ddPTM_A549_PD325901_60min_R1 2 NSSPNSSPR 9 0 K7EQL6;Q8NFA0;P35125-2;P35125 K7EQL6 USP32;USP6 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32;Ubiquitin carboxyl-terminal hydrolase 6 1 NS(0.002)S(0.939)PNS(0.029)S(0.029)PR;NS(0.17)S(0.729)PNS(0.08)S(0.022)PR 123.51 9.9336e-05 23773300.0 3268.6 3324.8999999999996 2485.2 2197.76 2621.2 2446.7 1843.68 2286.78 2578.1400000000003 3670.1000000000004 3926.5 True False 3600.4258657838586 3605.1009917375627 2653.8606167216312 2333.5106437248937 2437.095954649093 2426.7748864008004 1913.8422513004075 2241.1683789557933 2469.789741523355 3438.3692596568176 3443.565392134271 1.0455517627189208 1.0469094038325129 0.7706723452336729 0.6776437726593071 0.7077246043347581 0.7047274002532361 0.555773459586965 0.650827884399997 0.7172187719056544 0.9984910603151831 1.0 11.749687358239528 -5.758847711548868 24.629146378414696 0.7901457174873461 1.0462307147548533 0.39738596137509374 0.13288105319377685 53.808291134938735 511310.961456909 0.022413322179757767 0.07948007241041731 1.7424177574680903e-06 5.758847711548868 0.2560849972675072 NSS(ph)PPPS(ph)PNK ddPTM_A549_MK2206_60min_R1 1 NSSPPPSPNK 10 0 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 2 NS(0.016)S(0.984)PPPS(1)PNK 84.89200000000001 0.0010053 9451400.0 1256.3 1449.1 1815.5 1262.3 1980.8 1560.1 1683.0 1721.4 2028.4 2136.0 1815.5 True False 1468.332726413933 1522.853000393463 2072.9651994689043 1571.5635566668007 1689.426943949893 1725.1887464894342 1988.7793148951384 1965.4137215664036 1568.9706386892 1653.4761164835734 1364.661244749027 1.075968656737205 1.11592016425551 1.519032805720324 1.1516144117918619 1.2379826498704396 1.2641882761217502 1.4573428552672734 1.4402209552949239 1.149714366643238 1.2116385094439037 1.0 10.414327154360953 -9.243963727054576 1.9093175411722063 1.0484878862084748 1.2826122559101667 0.15382532462945475 0.14739463971073938 0.24985371458142355 1.8804193043475366 0.029814956603898733 0.027089730812916962 5.702118952695125e-10 9.243963727054576 0.23412436970169193 NSS(ph)PPPSPNK ddPTM_A549_MK2206_60min_R1 2 NSSPPPSPNK 10 0 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 NS(0.008)S(0.992)PPPSPNK;NS(0.009)S(0.991)PPPSPNK 184.65 4.7901999999999996e-14 46407000.0 6586.2 8516.9 9066.1 9869.099999999999 13462.6 11134.5 9760.5 10257.8 15675.6 14518.400000000001 14224.7 True False 7697.789542869895 8950.37383137884 10351.809305924002 12287.02994304073 11482.26937379838 12312.745399517074 11533.856508041594 11711.874563194997 12125.101628789402 11238.683356533285 10692.314408251994 0.7199366992920617 0.8370847965779253 0.9681542190654999 1.1491459635304013 1.0738806338257996 1.1515510047118034 1.0787053268037203 1.0953544869720757 1.134001598328574 1.0510992220598772 1.0 13.384286545415254 -5.74880318445313 2.0255080855927416 1.0795480383394405 0.7299213821967172 0.8750215438845359 0.04602244470969203 0.11274738553041695 0.8448996610127701 0.008299003089205292 0.05069913544497616 1.7831866970143414e-06 5.74880318445313 -0.34962665614272326 NSS(ph)PPPSPNK ddPTM_A549_PD325901_60min_R1 2 NSSPPPSPNK 10 0 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 NS(0.096)S(0.904)PPPSPNK;NS(0.095)S(0.905)PPPSPNK 138.71 2.6744e-07 108218000.0 10150.0 10264.5 11623.3 11877.7 15098.5 11874.599999999999 10970.0 12827.6 12816.2 11850.5 11871.4 True False 11180.42052796493 11129.525438265886 12412.12703458093 12611.358552786105 14038.033446997311 11777.897194611076 11387.469353014332 12571.743454942472 12277.579683536047 11102.257407581015 10411.293059004904 1.0738743463084823 1.0689858959103808 1.1921792004351919 1.2113152978513393 1.348346777622937 1.1312617105157916 1.0937612925192917 1.2075102855806137 1.1792559880846847 1.0663668138683777 1.0 13.34586163876933 -10.66234397041528 0.7585676718530079 0.990484572275407 1.1708393166100615 0.29363375903428535 0.07763907412603961 0.6410115627625269 0.6029550328448335 0.0704905434748819 0.015361377513357815 2.175985663009126e-11 10.66234397041528 0.18035474433465448 NSS(ph)QDDLFPTSDTPR ddPTM_A549_MK2206_60min_R1 2 NSSQDDLFPTSDTPR 15 0 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 NS(0.106)S(0.894)QDDLFPTSDTPR;NS(0.055)S(0.945)QDDLFPTSDTPR 107.07 4.3607e-06 1636200.0 795.8 896.46 801.34 906.06 1061.9 986.77 959.29 1024.2 1696.9 1053.8 1339.7 True False 930.1115845579943 942.0859849097535 914.9820616592741 1128.0447406745789 905.6959166904238 1091.189346435086 1133.5805757491128 1169.3834864809521 1312.554859392479 815.7458481041143 1007.0155161609867 0.9236318305241503 0.9355228095205901 0.9086077095886578 1.1201860572863742 0.8993862578634136 1.0835874213686325 1.1256833261821286 1.161236810867578 1.3034107601403107 0.8100628391645407 1.0 9.975870197317661 -7.487278295179866 3.1526722814667636 1.1471465224840147 0.96245015267558 0.08461119032676978 0.13317761059561103 0.22528721158192266 4.5287679551271385 0.018420743517015746 0.02955626129493516 3.256279722709567e-08 7.487278295179866 -0.18469636980843473 NSS(ph)QSEEDDIER ddPTM_A549_MK2206_60min_R1 3 NSSQSEEDDIER 12 0 F6RP06;A0A0J9YW18;Q12983 F6RP06 BNIP3 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 1 NS(0.038)S(0.791)QS(0.171)EEDDIER;NS(0.12)S(0.44)QS(0.44)EEDDIER;NS(0.007)S(0.672)QS(0.321)EEDDIER 83.53 0.00055735 9851400.0 829.9 1558.6599999999999 1514.0 1480.74 1549.7800000000002 1783.3600000000001 1318.12 1722.3899999999999 2134.7 1639.0700000000002 2135.38 True False 969.9668308930372 1637.989136424866 1728.7079658473824 1843.5213664729451 1321.8094149811523 1972.0739715014392 1557.6053419783595 1966.544057098151 1651.1938584154182 1268.8029486164457 1605.1062125101507 0.6043007143908261 1.0204864473506032 1.0770053423093644 1.1485354377826176 0.8235027717661352 1.2286252187744042 0.9704064004228687 1.2251800172293672 1.0287131440561763 0.7904791213985921 1.0 10.64845305066496 -5.2621813388040035 5.380212820634927 1.0391851249175554 0.5874365550172884 0.4544680182011286 0.13437554322821446 0.07665559808690794 8.083662331015406 0.013639039066630198 0.12715774072610528 5.467876051364767e-06 5.2621813388040035 -0.451748569900267 NSS(ph)QSEEDDIER ddPTM_A549_PD325901_60min_R1 2 NSSQSEEDDIER 12 0 F6RP06;A0A0J9YW18;Q12983 F6RP06 BNIP3 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 1 NS(0.074)S(0.926)QSEEDDIER;NS(0.005)S(0.962)QS(0.034)EEDDIER 146.84 6.3632e-12 7884900.0 1797.51 2065.66 1948.62 1926.48 2653.0 2006.4 2205.94 2122.7200000000003 2517.48 2074.7400000000002 1920.32 True False 1979.9918919430756 2239.7404176344016 2080.865071203968 2045.4742942464745 2466.6624323531387 1990.060543619799 2289.888253836687 2080.3806843583748 2411.6790703725223 1943.740562322657 1684.1328139114426 1.1756744335053317 1.3299072372044969 1.2355706474070203 1.2145564039547492 1.4646484006354883 1.1816529712985233 1.3596838888961267 1.2352830294462562 1.4320005230296147 1.1541492133320939 1.0 10.71779020122307 -10.959540064842242 1.205408040634735 0.9988661792643204 1.304622901248161 0.36588181744748516 0.10216961024588644 0.25982809360294806 0.6671206984448301 0.0659452697864796 0.01507449466328688 1.0976400253375073e-11 10.959540064842242 0.3057567219838405 NSSLGSPSNLCGS(ph)PPGSIR ddPTM_A549_MK2206_60min_R1 1 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 NSSLGSPSNLCGS(0.998)PPGS(0.002)IR 117.03 5.5999e-14 8335100.0 1321.3 1532.1 1526.7 1876.7 2766.5 2202.1 1599.4 1889.6 3248.4 2780.0 2584.5 True False 1544.3031373165077 1610.0773458717986 1743.2090168158502 2336.491584248264 2359.5515147603905 2435.124760364324 1889.9902770310653 2157.4565866573007 2512.642586628869 2151.9960692061486 1942.69732142873 0.7949273004508861 0.8287844576260028 0.8973137490784365 1.2027048982236326 1.21457495654809 1.2534761506612082 0.9728691423948111 1.1105469508089036 1.2933783142198296 1.1077361591374886 1.0 10.92384542650685 -6.132068196423058 3.9735165999359663 1.1443743156052317 0.8211949737319003 0.6790611487707243 0.09392235696898169 0.13091292859133397 3.5450780493485476 0.017047854771879686 0.04864614494615522 7.377883675511945e-07 6.132068196423058 -0.3231793418733314 NSSLKSS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 NSSLKSSPSK 10 1 O60331-4;O60331;O60331-2;O60331-3 O60331-4 PIP5K1C Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma 1 NS(0.007)S(0.007)LKS(0.136)S(0.838)PS(0.013)K 41.092 0.025766000000000004 3925500.0 2162.7 2656.9 2319.6 2740.7 2836.9 2679.5 2091.1 2641.7 2602.8 3161.3 3797.2 True False 2382.2557119044063 2880.8062873913605 2477.0220048879332 2909.986814418689 2637.6459307736964 2657.6790403853947 2170.677954793826 2589.009221126442 2493.4133674808145 2961.694978489166 3330.1684724340384 0.7153559141598631 0.865063227652793 0.7438128207001684 0.873825705367922 0.7920457936609515 0.7980614381478672 0.6518222644775883 0.7774409140430426 0.7487349027895772 0.8893528970095758 1.0 11.701379449405165 -10.700440613976996 0.888435428272914 1.00441736018769 0.7756801447896067 0.4631580463787298 0.06732300592769508 0.2943880313611727 0.4006079992354313 0.04451957966084896 0.010796314071926327 1.9932390457710242e-11 10.700440613976996 -0.22873721539808334 NSSLLS(ph)FDNEDENE ddPTM_A549_MK2206_60min_R1 1 NSSLLSFDNEDENE 14 0 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 NS(0.003)S(0.009)LLS(0.987)FDNEDENE 60.55 0.0069583 1313900.0 521.06 952.0 806.28 531.6 1415.0 926.36 819.15 752.04 965.98 916.95 904.16 True False 609.0021893060925 1000.4527336792321 920.6226279414967 661.8420238644309 1206.855374439165 1024.386800331999 967.9789517506549 858.6439730259085 747.187072353083 709.8103581505675 679.6321184534729 0.8960762341425221 1.472050402732287 1.3545896418733216 0.973823934881824 1.7757479990577951 1.5072666116236937 1.424268991220317 1.263395224728024 1.099399295685633 1.0444037868100853 1.0 9.408610223636787 -8.746308369204446 2.243166538748116 1.0399622836996651 1.3574844285005057 0.24125439685321748 0.2292663170568034 0.28314431691648045 2.7987021360233855 0.04096941879836006 0.04453524831535068 1.793459735116145e-09 8.746308369204446 0.3175221448008405 NSSLLS(ph)FDNEDENE ddPTM_A549_PD325901_60min_R1 2 NSSLLSFDNEDENE 14 0 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 NS(0.001)S(0.004)LLS(0.995)FDNEDENE;NS(0.001)S(0.003)LLS(0.997)FDNEDENE 108.58 1.4944000000000001e-05 5809900.0 2476.7 2612.2 2588.0 2371.1 2877.9 2722.2 2527.9 2797.9 2831.1000000000004 3361.5 2979.3 True False 2728.1327607498265 2832.339261516698 2763.6372429082485 2517.5574618411924 2675.766232216019 2700.0313057425333 2624.100617819959 2742.0936895899126 2712.1187124154517 3149.2543163228215 2612.8649873387576 1.044115472467818 1.0839975564146842 1.0577038064730067 0.9635237465542996 1.0240736682461833 1.0333604372312233 1.0043001190400753 1.0494586221934017 1.03798654946109 1.205287809199198 1.0 11.351416863920418 -6.027968308570568 24.801438140845097 1.0179366890976687 1.0657550718097615 0.0 0.06108201310067446 433.7785301346987 384661.35077431944 0.0033415950093928404 0.008865044489391826 9.376304253966308e-07 6.027968308570568 0.04781838271209282 NSSNKPAVT(ph)TKSPAVKPAAAPK ddPTM_A549_MK2206_60min_R1 1 NSSNKPAVTTKSPAVKPAAAPK 22 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(0.001)S(0.001)NKPAVT(0.333)T(0.333)KS(0.333)PAVKPAAAPK 65.423 0.0004487 6953000.0 535.24 1175.1 1141.6 677.28 1579.1 1060.0 1275.6 1128.4 1423.3 1290.1 1220.3 True False 625.575426638377 1234.9075707420857 1303.4960461105488 843.2136304042543 1346.8164818211217 1172.168496428947 1507.3600083661538 1288.354155580069 1100.9248225430579 998.6655139866366 917.2658314333443 0.6820001412903782 1.34629191279521 1.4210668286571526 0.9192685495399148 1.4682946160946058 1.2778939934972668 1.6433186070069923 1.4045591925809031 1.2002243895019213 1.0887416491096098 1.0 9.841196089475606 -9.81089574483558 1.1138868457094915 1.034545071087967 1.279391945691825 0.09579391395938075 0.25328560607380485 0.6143171110429282 1.5534629728798266 0.07452662114422515 0.046991551655065814 1.545625432264682e-10 9.81089574483558 0.24484687460385812 NSSNKPAVTTK ddPTM_A549_PD325901_60min_R1 1 NSSNKPAVTTK 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2;S4R349 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 64.878 0.0060375 2189800.0 1749.7 1887.8 1791.1 1888.8 2199.2 2461.7 1951.6 2090.2 1962.7 2302.7 2477.0 False True 1927.3282559389388 2046.8915312346753 1912.6548167592596 2005.4668862239632 2044.735778828127 2441.652731374034 2025.8692059564974 2048.5093212698216 1880.2145444731052 2157.30712901876 2172.3447029967124 0.8872110642846978 0.9422498779365095 0.8804564092065063 0.9231807840889413 0.9412575159031846 1.123971130367025 0.9325726267851715 0.9429945986214517 0.8655231105263274 0.9930777219852778 1.0 11.085037329722638 -6.661648795323552 3.9565777979095835 0.9500043135148621 0.906792247448513 0.13860613823235102 0.06363896198167998 0.534662933135009 15.648486784704634 0.010572384999067147 0.022695444977542324 2.1794715520183632e-07 6.661648795323552 -0.0432120660663492 NSSNKPAVTTKS(ph)PAVKPAAAPK ddPTM_A549_MK2206_60min_R1 2 NSSNKPAVTTKSPAVKPAAAPK 22 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NSSNKPAVT(0.036)T(0.036)KS(0.928)PAVKPAAAPK;NSSNKPAVT(0.024)T(0.024)KS(0.951)PAVKPAAAPK 100.88 1.5141e-10 96789000.0 4993.6 5826.5 7006.299999999999 6371.2 8984.2 6895.5 7368.2 6312.6 9787.599999999999 8734.3 8210.9 True False 5836.3975982015545 6123.04396300635 7999.898692943533 7932.144286014037 7662.636081297774 7625.177233137549 8706.906564474368 7207.4303815267085 7570.724227585493 6761.215563765203 6171.906920688395 0.9456392770016987 0.9920830047649852 1.296179413550075 1.2852015411031685 1.2415346147901898 1.2354653644528812 1.4107319952101978 1.1677801486874684 1.2266426446270966 1.0954824255533455 1.0 12.59150058926778 -10.652265542997332 0.8907938550064526 0.9983150961391428 1.207081562405995 0.15873838866806644 0.1285693922693835 0.6887639482755908 0.9607092337847859 0.09346645020046518 0.024174631818240325 2.227073021719985e-11 10.652265542997332 0.20876646626685214 NSSNKPAVTTKS(ph)PAVKPAAAPK ddPTM_A549_PD325901_60min_R1 4 NSSNKPAVTTKSPAVKPAAAPK 22 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(0.019)S(0.016)NKPAVT(0.099)T(0.099)KS(0.766)PAVKPAAAPK;NS(0.004)S(0.004)NKPAVT(0.289)T(0.289)KS(0.414)PAVKPAAAPK;NSSNKPAVT(0.012)T(0.012)KS(0.975)PAVKPAAAPK;NS(0.004)S(0.004)NKPAVT(0.131)T(0.131)KS(0.729)PAVKPAAAPK 90.55 3.0761999999999994e-07 174911200.0 10101.470000000001 9535.8 11999.699999999999 10761.599999999999 12383.1 13711.2 13732.9 12903.4 12836.5 11867.6 12373.4 True False 11126.963798090821 10339.41533189301 12814.071802057992 11426.319590633106 11513.353775375861 13599.540533133875 14255.513024431235 12646.03156447853 12297.026545131193 11118.277710662718 10851.550241445104 1.0253801116446788 0.9528053689881001 1.1808517232051756 1.0529665657348013 1.0609870036267395 1.2532348125886592 1.3136844697069592 1.1653663562446406 1.1332045902681638 1.0245796649587362 1.0 13.405613538890497 -3.9981877036001525 13.373646311881396 1.094019648650418 0.7305772369782104 0.0 0.10823320750951768 0.0 0.0 0.015380737744686594 0.0 0.00010041816856235511 3.9981877036001525 -0.3634424116722075 NSSNTSVGS(ph)PSNTIGR ddPTM_A549_MK2206_60min_R1 2 NSSNTSVGSPSNTIGR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 NSSNT(0.005)S(0.005)VGS(0.962)PS(0.028)NTIGR;NSSNTS(0.002)VGS(0.991)PS(0.007)NTIGR 173.77 3.9573999999999996e-28 150076000.0 3892.8999999999996 4727.5 5639.4 4666.299999999999 7483.6 5858.799999999999 5572.9 5233.3 8312.7 8633.2 8023.900000000001 True False 4549.926347732867 4968.109557214884 6439.151719022276 5809.543709478168 6382.772353464978 6478.774327243311 6585.423793213968 5975.136301309085 6429.886722654168 6682.954123982199 6031.344181625844 0.7543801531993425 0.8237151466749245 1.0676147016512165 0.9632253664409705 1.05826697353962 1.074184150687427 1.0918666875745704 0.9906807042304113 1.0660785604380631 1.1080372671056393 1.0 12.558263850312123 -5.675217527472512 4.417616068268173 1.0351377639762098 0.771127991227779 0.8317539810034504 0.04472673428377031 0.05310193977044652 1.8406378237483823 0.005572963775471939 0.023485035595579212 2.1124307099921464e-06 5.675217527472512 -0.26400977274843085 NSSNTSVGS(ph)PSNTIGR ddPTM_A549_PD325901_60min_R1 2 NSSNTSVGSPSNTIGR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 NSSNT(0.001)S(0.001)VGS(0.998)PSNTIGR;NSSNT(0.011)S(0.004)VGS(0.984)PSNTIGR 202.53 1.5983999999999998e-39 163742000.0 13073.6 12484.3 12299.1 13578.7 16737.2 15797.8 15725.7 16228.9 15472.199999999999 15306.5 16434.5 True False 14400.822247724362 13536.395774654658 13133.790886496454 14417.425459534807 15561.636812205408 15669.147954543902 16324.150118933232 15905.201858174234 14821.95724002484 14340.044977776372 14413.160686879071 0.9991439463263639 0.9391691433078541 0.9112359996411278 1.0002958943390965 1.0796824617637022 1.0871416960478495 1.1325864238642547 1.1035193600979856 1.0283627277893261 0.9949271564585234 1.0 13.815099120841063 -6.505000589934263 6.90252930550945 1.039353273902712 0.9495946514121858 0.4886151502695588 0.04710098645856803 0.14661388147672394 31.947655265432072 0.007869697790948392 0.01765970916844513 3.126075120742405e-07 6.505000589934263 -0.08975862249052624 NSSNTSVGS(ph)PSNTIGRT(ph)PSR ddPTM_A549_MK2206_60min_R1 1 NSSNTSVGSPSNTIGRTPSR 20 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 2 NS(0.011)S(0.011)NT(0.015)S(0.04)VGS(0.72)PS(0.177)NT(0.176)IGRT(0.674)PS(0.176)R 54.167 0.00039802 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSSPEDRYEEQERS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NSSPEDRYEEQERSPR 16 2 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 NSSPEDRYEEQERS(1)PR;NSSPEDRYEEQERS(1)PR 89.66799999999999 2.3095e-06 59012000.0 788.94 768.5999999999999 786.91 927.24 1317.71 799.7 819.5 878.25 1440.37 1005.98 1227.1799999999998 True False 922.0937842688915 807.7184570439689 898.50567067699 1154.413841625385 1123.8766045598816 884.3237232021021 968.3925422201813 1002.7446270278231 1114.1284947982458 778.7284193165469 922.4373375550044 0.9996275592149992 0.8756350422511004 0.9740560513937486 1.2514821274312824 1.218377182713363 0.9586816222618161 1.0498193240822027 1.0870598860250817 1.2078094082264 0.8442073923206863 1.0 9.84930710000557 -6.021292481743794 24.073058300542566 1.1030397662842841 0.9344348321218203 0.16585478962790112 0.11891955878517176 397.9331735178107 449901.04709799646 0.014505433223532089 0.03885586522483569 9.521547060331935e-07 6.021292481743794 -0.1686049341624638 NSSPEDRYEEQERS(ph)PR ddPTM_A549_PD325901_60min_R1 4 NSSPEDRYEEQERSPR 16 2 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 NSSPEDRYEEQERS(1)PR;NSSPEDRY(0.018)EEQERS(0.982)PR;NSSPEDRYEEQERS(1)PR;NSSPEDRYEEQERS(1)PR 92.932 1.6796e-06 81698100.0 2047.47 2104.0299999999997 1805.3600000000001 2241.89 2350.66 2340.02 2301.86 2016.95 1859.7199999999998 2730.9700000000003 2373.81 True False 2255.32764713225 2281.3439921939275 1927.8825861116063 2380.366453598391 2185.5577509367613 2320.9636529511595 2389.4585419261234 1976.7203499833338 1781.5624357505078 2558.536088129743 2081.846418821407 1.083330464121871 1.0958272289295297 0.926044576911219 1.14339195825309 1.049816994749338 1.114858248892886 1.1477592776891123 0.9495034466098666 0.8557607418318117 1.2289744646861143 1.0 11.023647927277636 -8.370688615585813 6.516603555366119 0.9305607497880938 1.0771752682605051 0.0 0.1105109357087367 0.16236424571919364 8.511361387987822 0.012140607482026554 0.014686853441931205 4.259036719818779e-09 8.370688615585813 0.14661451847241136 NSSQDDLFPTS(ph)DTPR ddPTM_A549_MK2206_60min_R1 1 NSSQDDLFPTSDTPR 15 0 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 NSSQDDLFPT(0.17)S(0.73)DT(0.101)PR 96.24700000000001 1.7579000000000002e-05 1738900.0 1271.2 1338.7 1097.4 1260.2 1955.6 1046.1 1074.1 1349.4 2133.3 2052.2 1756.4 True False 1485.747482143907 1406.8341119499885 1253.0278214801294 1568.949056572528 1667.9338305676551 1156.7976076550196 1269.2500666244007 1540.6815823641834 1650.1109561800777 1588.6065946852002 1320.237405826049 1.1253638743967425 1.065591768375747 0.949092804029539 1.188384035817304 1.2633590164975357 0.8762042361095139 0.9613801737652278 1.1669731334420164 1.2498592669002835 1.2032734322439813 1.0 10.366581663799925 NSSQDDLFPTSDT(ph)PR ddPTM_A549_MK2206_60min_R1 1 NSSQDDLFPTSDTPR 15 0 Q9H6T3-3;Q9H6T3-2;Q9H6T3 Q9H6T3-3 RPAP3 RNA polymerase II-associated protein 3 1 NSSQDDLFPT(0.024)S(0.024)DT(0.951)PR 104.41 5.9816e-06 2177700.0 755.65 960.93 707.09 979.37 1075.9 987.96 855.27 863.02 1713.6 1037.9 1285.6 True False 883.1852461312488 1009.8372325361191 807.3659944326454 1219.3156939655908 917.6365352361121 1092.5052714452288 1010.6614882058014 985.3557278879034 1325.472336056898 803.4376691471439 966.3500392450279 0.9139392665842364 1.0450014917214325 0.8354798588960677 1.2617743513708501 0.9495902084849359 1.1305481731017066 1.0458544493829507 1.0196674992197692 1.3716275492599332 0.8314147426069738 1.0 9.916402058348476 -6.622407891780924 0.6317257967880577 1.1603447448576325 0.9292182137437947 0.0 0.16654355173051483 1.4162315719146263 0.8813379604756191 0.031021163767508315 0.17293935268905988 2.3855696901643133e-07 6.622407891780924 -0.23112653111383785 NSSQS(ph)EEDDIER ddPTM_A549_PD325901_60min_R1 1 NSSQSEEDDIER 12 0 F6RP06;A0A0J9YW18;Q12983 F6RP06 BNIP3 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 1 NS(0.005)S(0.008)QS(0.987)EEDDIER 91.81200000000001 0.00026877 5767700.0 509.76 468.53 779.5 755.22 860.08 916.14 767.0 768.53 1141.3 460.75 827.55 True False 561.5104599345223 508.0146674061779 832.401557514289 801.8682241709354 799.6709479149221 908.6792595852487 796.1886047185045 753.2010662498778 1093.3351299776602 431.6581663679133 725.7665962716709 0.7736791178032341 0.6999697561390887 1.1469273479799313 1.1048568896532376 1.1018293650092255 1.2520268420360166 1.0970312064630665 1.0378006787845298 1.50645556793909 0.5947616886549761 1.0 9.503361847443163 -5.803402151443409 5.115152056832536 1.2004729942437928 0.7338202124636014 0.1590398491518804 0.22636155835224966 0.11373009546335375 6.8018752483760485 0.026287770124123172 0.08973573017504943 1.5725260499498686e-06 5.803402151443409 -0.46665278178019143 NSSQSGGKPGS(ph)SPITK ddPTM_A549_MK2206_60min_R1 1 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSSQSGGKPGS(0.5)S(0.5)PITK 189.07 6.7875e-35 183080000.0 7281.2 10414.0 10566.0 8906.4 13231.0 10291.0 10526.0 9666.4 14062.0 11956.0 12155.0 True False 8510.08855175128 10944.028118209586 12064.417679751274 11088.468399823483 11284.737426999722 11379.986789387065 12438.437949249093 11036.641802108445 10876.979452399688 9255.131296197373 9136.578039066058 0.9314306204537363 1.1978257145525661 1.3204525401267737 1.2136347276202926 1.2351164055895536 1.2455414642909708 1.3613891214046425 1.2079622978010058 1.1904872268251905 1.0129756738928302 1.0 13.157438212476837 -10.24424579852738 0.7598026518899981 1.0048726667695285 1.2213687468798111 0.3670260897015698 0.102904444248187 0.5095164273116062 0.559915444083913 0.05914162627000239 0.02070503307369548 5.6984166655448684e-11 10.24424579852738 0.21649608011028265 NSSQSGGKPGS(ph)SPITK ddPTM_A549_PD325901_60min_R1 1 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSSQSGGKPGS(0.606)S(0.378)PIT(0.015)K 110.38 3.9455e-07 5062700.0 1096.0 886.23 1142.4 971.53 1079.7 1379.5 976.31 1540.1 1219.7 1016.4 854.4 True False 1207.2651131674445 960.915712324456 1219.9301338092666 1031.5392015952823 1003.8655967627909 1368.2658093717678 1013.4640113073311 1509.3814973149224 1168.440250621004 952.224330540091 749.314216487844 1.6111600268657518 1.2823935422290826 1.6280621760084508 1.3766443754801185 1.3397124659773174 1.8260240887795367 1.3525220648523122 2.0143505409381337 1.5593461660152013 1.2707944272074796 1.0 9.549427013276466 -10.520565046629486 0.9332573694712809 1.0141525271774552 1.5472936405366156 0.32068276636878723 0.22372331423916436 0.35671311326206306 0.5775584191335621 0.11921867927063712 0.03766574672447602 3.0160251129658776e-11 10.520565046629486 0.5331411133591604 NSSQSGGKPGSS(ph)PITK ddPTM_A549_MK2206_60min_R1 3 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSSQSGGKPGS(0.132)S(0.867)PITK;NSSQSGGKPGS(0.042)S(0.958)PITK;NSSQSGGKPGS(0.209)S(0.78)PIT(0.011)K 133.84 8.5126e-11 213883300.0 5354.35 6748.4400000000005 7573.75 6628.48 10079.5 6763.429999999999 7337.7300000000005 7368.1 10826.1 8482.560000000001 9443.099999999999 True False 6258.033378710853 7091.90677108223 8647.821635625238 8252.457897563772 8596.818902232913 7479.13167339852 8670.900559884429 8412.550738859889 8374.00563572922 6566.343804606223 7098.117653698446 0.8816468934478889 0.9991249958201271 1.2183260488954173 1.1626262482791987 1.2111406603345853 1.0536781775519808 1.2215774636204417 1.1851805153548791 1.179750187905941 0.925082412685123 1.0 12.793220772416896 -5.534239628321727 5.081014214146353 1.1204832268510065 0.9046548965940878 0.399591140881876 0.09313576650945005 0.12073970720855265 8.974919927047024 0.0126038345344394 0.058981359757557215 2.9225393791106706e-06 5.534239628321727 -0.21582833025691872 NSSQSGGKPGSS(ph)PITK ddPTM_A549_PD325901_60min_R1 3 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSSQSGGKPGS(0.026)S(0.974)PITK;NSSQSGGKPGS(0.228)S(0.772)PITK;NSSQSGGKPGS(0.022)S(0.978)PITK 191.22 4.0097e-35 598911600.0 10274.29 10364.1 12531.67 11240.91 14611.5 13623.0 13735.19 14283.400000000001 13924.099999999999 11820.3 12918.900000000001 True False 11317.32835726747 11237.519079812111 13382.144485253484 11935.235480741114 13585.238646938518 13512.05880469126 14257.89017163437 13998.506381889474 13338.918499362075 11073.964240734982 11329.957199654504 0.9988853583323847 0.9918412648685724 1.181129306089661 1.0534228215006027 1.1990547190551424 1.1925957500619064 1.2584240099396977 1.2355303850853334 1.17731411198701 0.9774056552546088 1.0 13.46785479075529 -5.746296230276136 24.807209052394676 1.1248525432544376 0.9953631923312687 0.2683324160369476 0.08972740724404799 272.2157167157857 445930.05288528925 0.013884970200736552 0.05333051781890053 1.7935098646580021e-06 5.746296230276136 -0.12948935092316893 NSSQSLMVPQS(ph)GSPEPESIR ddPTM_A549_PD325901_60min_R1 1 NSSQSLMVPQSGSPEPESIR 20 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;B7ZB24;H0YGQ3;A0A075B6R8 F5H1U9 MPDZ Multiple PDZ domain protein 1 NSSQSLMVPQS(0.642)GS(0.358)PEPESIR 105.01 4.4926999999999994e-10 11278000.0 1400.9 1315.1 1867.5 1369.5 1639.6 1484.1 1485.1 1500.0 1916.8 1303.3 1560.8 True False 1543.118336711928 1425.9280923438516 1994.2397801897807 1454.090904639834 1524.4401523129302 1472.013981651786 1541.6162931779018 1470.081323272764 1836.2435618515553 1221.0094155774311 1368.8314947263889 1.127325271705833 1.041711925709947 1.4568920921770598 1.062286271350359 1.1136799220254976 1.0753799772454986 1.1262279536357762 1.0739680734527617 1.34146793738012 0.8920085637140418 1.0 10.418729144197938 -11.207379649258671 1.6570036183069887 1.0000899606108857 1.1826448586505307 0.24669310056218885 0.1288997769647361 0.49134358787239235 2.4308265068507557 0.09594713864316391 0.020015917172440258 6.203265233728718e-12 11.207379649258671 0.18255489803964497 NSSQSLMVPQSGS(ph)PEPESIR ddPTM_A549_MK2206_60min_R1 4 NSSQSLMVPQSGSPEPESIR 20 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;B7ZB24;H0YGQ3;A0A075B6R8 F5H1U9 MPDZ Multiple PDZ domain protein 1 NSSQSLMVPQS(0.079)GS(0.92)PEPES(0.001)IR;NSSQSLMVPQS(0.144)GS(0.855)PEPES(0.001)IR;NSSQSLMVPQS(0.182)GS(0.815)PEPES(0.002)IR;NSSQSLMVPQS(0.167)GS(0.833)PEPESIR 124.63 8.4215e-15 15145200.0 3135.1899999999996 4296.86 3501.97 3184.4199999999996 5391.17 4147.16 4187.47 4278.42 5466.36 5983.6 4981.66 True False 3664.3334239637798 4515.5518206270435 3998.6020047282386 3964.6030429540465 4598.136034639714 4586.009718537989 4948.279095510367 4884.89913711173 4228.238187983186 4631.90060420932 3744.57633517843 0.9785708972038284 1.205891245481013 1.0678382937913067 1.0587587721763274 1.2279455999981936 1.2247072320184027 1.3214523226629804 1.3045265204558751 1.1291633043399314 1.2369625264932964 1.0 11.870586784731234 -9.89515678920221 1.1110545894276964 1.020486704192594 1.173231665453136 0.0 0.11966183150226858 0.4311802861314141 1.0793024472041248 0.03355414758555859 0.020093551708032693 1.2730434033049168e-10 9.89515678920221 0.15274496126054204 NSSQSLMVPQSGS(ph)PEPESIR ddPTM_A549_PD325901_60min_R1 1 NSSQSLMVPQSGSPEPESIR 20 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970;B7ZB24;H0YGQ3;A0A075B6R8 F5H1U9 MPDZ Multiple PDZ domain protein 1 NSSQSLMVPQS(0.205)GS(0.795)PEPESIR 111.66 1.0437999999999999e-10 7444000.0 1469.6 1285.0 1530.1 1947.4 1823.5 1604.1 1711.2 1578.2 1560.5 1655.0 1659.6 True False 1618.7927101376597 1393.2914597078923 1633.9417872387596 2067.6864751337084 1695.4236507334904 1591.0367414376599 1776.320652404569 1546.7215629260515 1494.9176117849292 1550.503017555932 1455.479721071191 1.1122056093961068 0.9572730142076249 1.122613914562977 1.4206219744593562 1.1648555635565347 1.0931356297198718 1.220436552078684 1.0626885009347358 1.0270961457880794 1.0652865822237678 1.0 10.507279023460562 -8.486780700734245 4.069309023327224 1.0135440797026634 1.1550813595354366 0.21770607966331423 0.10618937243037302 0.23027840357308307 8.319311452818901 0.01844448789340623 0.02191421876145598 3.260012754929999e-09 8.486780700734245 0.1415372798327732 NSSS(ph)PVS(ph)PASVPGQR ddPTM_A549_MK2206_60min_R1 2 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 NS(0.105)S(0.313)S(0.594)PVS(0.765)PAS(0.222)VPGQR;NS(0.105)S(0.299)S(0.671)PVS(0.829)PAS(0.096)VPGQR 54.315 0.018596 11305800.0 2280.3 3604.3999999999996 2519.4 3973.0 3606.7 2998.0 2685.0 2676.9 5052.200000000001 3132.5 4369.9 True False 2665.1588920175836 3787.8485643628405 2876.6888039338796 4946.385178354745 3076.1592077665996 3315.2463700886615 3172.8297447970544 3056.3587726624305 3907.88476670557 2424.8660743842665 3284.7332268954974 0.8113775786097879 1.1531677925463837 0.8757754755787966 1.5058712037414759 0.9365019912664179 1.009289382450703 0.9659322464356698 0.9304739720221022 1.1897114611036563 0.7382231392581254 1.0 11.681560489954474 -8.763384331027055 24.999934187058034 1.0895859569202344 1.0337235755196448 0.0 0.20854201109113318 211.46610787544574 2718125.393160506 0.030301370059769475 0.033070840058556136 1.724311278893498e-09 8.763384331027055 -0.055862381400589634 NSSS(ph)PVS(ph)PASVPGQR ddPTM_A549_PD325901_60min_R1 2 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 NS(0.013)S(0.101)S(0.888)PVS(0.993)PAS(0.005)VPGQR;NS(0.022)S(0.27)S(0.708)PVS(0.992)PAS(0.008)VPGQR 155.56 2.2924e-19 19286300.0 2124.87 2371.27 2204.1 2206.9 2272.8 1845.74 2406.83 2058.5 2487.7 2355.31 3100.5 True False 2340.585238153381 2571.1052448727896 2353.6834803300103 2343.215200766447 2113.166368734344 1830.7089053931456 2498.423232717911 2017.441602637989 2383.150620209784 2206.595324640282 2719.1581556888586 0.8607756901732802 0.945551931024563 0.8655927112609377 0.8617428875419084 0.777139926308922 0.6732631206327764 0.9188223301726164 0.7419361019575929 0.8764295725954373 0.8114994414810982 1.0 11.408944350622878 -9.94446547175967 0.8616489796748904 0.9874791394177985 0.8334836723107258 0.0 0.0914566167124657 0.4054710885146445 0.6142489727206832 0.03094544624768542 0.015519688241725659 1.1364086433489288e-10 9.94446547175967 -0.15399546710707268 NSSS(ph)PVSLDAALPESSNVYRDPSAK ddPTM_A549_MK2206_60min_R1 2 NSSSPVSLDAALPESSNVYRDPSAK 25 1 Q70EL1-7;Q70EL1;H7C296;R4GN32;H7C1E9;Q70EL1-6 Q70EL1-7 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.015)S(0.111)S(0.867)PVS(0.007)LDAALPESSNVYRDPSAK;NS(0.014)S(0.213)S(0.773)PVS(0.001)LDAALPESSNVYRDPSAK 117.49 2.0356e-17 20361000.0 2528.7 3115.4 3079.7 3577.4 5362.5 2751.0 3736.9 3614.8999999999996 4705.5 4111.4 4361.9 True False 2955.4827392206585 3273.9605530507138 3516.447769101838 4453.863160595588 4573.683353660796 3042.1089940339907 4415.846358782911 4127.323145166951 3639.7117631394326 3182.631884508688 3278.7198476842646 0.9014136237678537 0.998548429004414 1.0725063233400312 1.358415286301853 1.3949600960543043 0.9278343790740797 1.3468202725224574 1.2588215330693924 1.110101482354503 0.9706934512128437 1.0 11.678916919658208 -9.749953718651028 1.1412609870665118 1.02031738953729 1.1598283971053203 0.12420512445015153 0.16492390056043424 0.7198792526342719 1.9151684721338311 0.049062338042427406 0.03233638736249159 1.7784689255838233e-10 9.749953718651028 0.13951100756803037 NSSS(ph)PVSLDAALPESSNVYRDPSAK ddPTM_A549_PD325901_60min_R1 2 NSSSPVSLDAALPESSNVYRDPSAK 25 1 Q70EL1-7;Q70EL1;H7C296;R4GN32;H7C1E9;Q70EL1-6 Q70EL1-7 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.006)S(0.142)S(0.852)PVSLDAALPESSNVYRDPSAK;NS(0.006)S(0.026)S(0.968)PVS(0.001)LDAALPESSNVYRDPSAK 151.73 3.1902e-33 51044000.0 5045.200000000001 4570.1 5990.2 5268.6 5355.1 6436.0 5915.5 6519.1 4963.7 5568.200000000001 6089.9 True False 5557.384989920062 4955.238365767344 6396.730993998837 5594.029456141239 4978.97625009208 6383.587349848998 6140.617589585805 6389.071436364989 4755.092950731723 5216.622901725043 5340.88090705679 1.040537148577346 0.9277942069856107 1.197692123325007 1.0473982763311516 0.9322387704832485 1.1952311727105733 1.1497387222157192 1.1962579858171425 0.8903199740793549 0.9767345485708981 1.0 12.38286199950173 -8.776307008313475 24.999197656276575 0.9482066540795749 1.0836919621205583 0.2693442795285117 0.09522193154126463 225.10708823845712 378505.3620550435 0.017239268483476927 0.018388680745619446 1.6737592559323652e-09 8.776307008313475 0.13548530804098335 NSSS(ph)PVSPASVPGQR ddPTM_A549_MK2206_60min_R1 2 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NS(0.017)S(0.41)S(0.573)PVSPASVPGQR;NSS(0.032)S(0.968)PVSPASVPGQR 242.24 1.0806999999999999e-64 103878000.0 9539.0 10851.2 9967.400000000001 10874.099999999999 15677.9 12530.800000000001 11480.9 12283.9 16447.7 15492.6 14871.9 True False 11148.949993841046 11403.479730777402 11380.92719867054 13538.254988156905 13371.701678388537 13856.800938728153 13566.83091882329 14025.18044286601 12722.32221157975 11992.810899921998 11178.796786440675 0.9973300532096772 1.0200990275276547 1.018081589288307 1.2110654882445073 1.196166450991197 1.2395610371534587 1.2136217499972075 1.254623436743913 1.1380761681803981 1.0728176859309835 1.0 13.448477293700968 -3.9455403826246584 10.456716727170425 1.1042690504377783 0.6176687759568316 0.0 0.1007571121651379 0.0 0.0 0.015358298550664852 0.0 0.00011335994261086693 3.9455403826246584 -0.4866002744809468 NSSS(ph)PVSPASVPGQR ddPTM_A549_PD325901_60min_R1 2 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NSS(0.128)S(0.871)PVSPASVPGQR;NSS(0.003)S(0.997)PVSPASVPGQR 255.49 8.113099999999998e-77 133638000.0 19975.6 18616.1 23227.0 21180.0 26227.0 23003.0 21147.2 21212.0 23708.0 22030.0 23445.0 True False 22003.50820674051 20184.944080208625 24803.32389529747 22488.240496729963 24384.905998238122 22815.67119462035 21951.96826819187 20788.910019507908 22711.635206790837 20639.02204033669 20561.413630100084 1.0701359645102089 0.9816904831222139 1.206304407931739 1.0937108168384482 1.1859547420679668 1.1096353395284182 1.0676293305075162 1.01106423874839 1.1045755712799348 1.0037744686057477 1.0 14.327651835084458 -11.55856338185851 0.38404528267063437 0.931523183373689 1.1001820137745497 0.2517402494982742 0.06146489994427641 4.989333236689856 0.5846298391535886 0.3728719584775911 0.018539934656375646 2.7633545999047157e-12 11.55856338185851 0.16865883040086072 NSSSPVAATPASVNTT(ph)PDKPK ddPTM_A549_MK2206_60min_R1 2 NSSSPVAATPASVNTTPDKPK 21 1 Q14469 Q14469 HES1 Transcription factor HES-1 1 NSSSPVAATPAS(0.007)VNT(0.178)T(0.814)PDKPK;NSSSPVAAT(0.004)PAS(0.007)VNT(0.377)T(0.612)PDKPK 82.486 4.166e-05 8336400.0 1825.12 2081.8 2397.7 2128.4 3601.2 2743.2 2706.2 3171.2 4266.299999999999 4224.5 3805.5 True False 2133.1556361001335 2187.754727913264 2737.7299139446936 2649.8580955475068 3071.4682504807915 3033.483603211213 3197.88151037981 3620.727311392692 3299.9898618811535 3270.1825159573286 2860.489323543057 0.7457310252981354 0.76481835114961 0.957084472020923 0.9263653158003546 1.073756236459716 1.0604771632057282 1.117949115929177 1.2657720067656082 1.1536452294091148 1.1432248633275155 1.0 11.48204624434584 -6.019149263176179 0.9323562315641801 1.0937483916796693 0.6983522174899112 0.7820144043081163 0.0719217629515401 0.3818629410241819 0.46897486701899865 0.013577534841716385 0.11643622673832237 9.568651486770579e-07 6.019149263176179 -0.39539617418975814 NSSSS(ph)TS(ph)PVSK ddPTM_A549_PD325901_60min_R1 2 NSSSSTSPVSK 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 2 NS(0.001)S(0.045)S(0.106)S(0.83)T(0.141)S(0.872)PVS(0.005)K;NSS(0.002)S(0.015)S(0.908)T(0.149)S(0.91)PVS(0.015)K 84.89200000000001 0.00055063 12063100.0 8881.6 7891.099999999999 8175.4 7864.6 9688.5 9584.7 7738.6 9185.5 9595.7 9522.8 10477.2 True False 9783.253493711647 8556.110690817859 8730.231806673919 8350.37848019747 9008.013183510506 9506.645380997154 8033.096657724408 9002.287996614648 9192.426098945622 8921.528782828784 9188.570820442934 1.06471982258064 0.9311688246209123 0.9501185741802967 0.908778812654887 0.98034975836169 1.0346163257344179 0.8742487612820264 0.9797266813883788 1.0004195732478995 0.9709375872665607 1.0 13.165624768526598 -8.523460846967716 22.96373318064307 0.9996652549147108 0.9603932457308062 0.04260401123809865 0.051045327580030726 11.36941863143986 448471.2280684831 0.007953463681563376 0.00906745295516394 2.9959816775541666e-09 8.523460846967716 -0.03927200918390461 NSSSSSS(ph)PSERPR ddPTM_A549_MK2206_60min_R1 2 NSSSSSSPSERPR 13 1 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 NS(0.026)S(0.02)S(0.005)S(0.026)S(0.155)S(0.76)PS(0.008)ERPR;NS(0.006)S(0.02)S(0.006)S(0.026)S(0.138)S(0.798)PS(0.007)ERPR 56.513999999999996 0.0043246000000000005 16102000.0 789.03 1023.88 836.65 1055.2 1433.4299999999998 953.22 883.38 680.21 1320.43 1602.62 1477.4299999999998 True False 922.1989740686029 1075.9911186549298 955.2995506117641 1313.7240473697277 1222.5743458532388 1054.0891077037743 1043.8787113440683 776.6318505557592 1021.3547132934239 1240.5870289320712 1110.5433560063639 0.8304033958520376 0.9688870883207228 0.8602091448704231 1.1829561090654075 1.1008794381965876 0.9491652009826926 0.9399711462846179 0.6993260068194121 0.9196891843703678 1.1170991409046458 1.0 10.117050001972357 -7.500560657520781 24.25257754186724 0.936103447766912 0.9946051203006421 0.03688801306919731 0.1299112918734201 1500.7719730850047 1630856.955906885 0.018716730190843016 0.029762151164394308 3.1581979149475475e-08 7.500560657520781 0.058501672533730065 NSSSSSS(ph)PSERPR ddPTM_A549_PD325901_60min_R1 2 NSSSSSSPSERPR 13 1 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 NS(0.001)S(0.003)S(0.001)S(0.006)S(0.054)S(0.936)PSERPR;NS(0.003)S(0.011)S(0.011)S(0.056)S(0.325)S(0.578)PS(0.016)ERPR 72.898 0.00040953 27082000.0 1627.07 943.4100000000001 1393.45 1282.1999999999998 1522.58 1241.6 1527.3899999999999 1440.98 1482.17 1455.02 1425.26 True False 1792.248948614374 1022.9144715976825 1488.0178964955564 1361.39858191252 1415.6392334158465 1231.4888212511678 1585.515662269878 1412.2385234730593 1419.8795492850159 1363.149788884733 1249.9620554675382 1.4338426840837162 0.8183564189995108 1.190450454065164 1.0891519274185486 1.132545765868339 0.9852209640000147 1.2684510344410644 1.129825115327059 1.1359381215407547 1.090552935524797 1.0 10.28766858497369 -10.669999711368026 0.9153330072661084 0.9993215187160053 1.1225645958927848 0.03268459091736764 0.14862384929805425 1.1147793946626192 1.6486193313117998 0.09081263367140134 0.023590474349948924 2.137963510391624e-11 10.669999711368026 0.12324307717677951 NSSTDQGS(ph)DEEGSLQK ddPTM_A549_MK2206_60min_R1 2 NSSTDQGSDEEGSLQK 16 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 NSSTDQGS(1)DEEGSLQK;NSSTDQGS(1)DEEGSLQK 188.96 2.4856999999999997e-34 40351000.0 7037.8 8609.4 8773.1 7715.6 11173.3 8392.3 8317.599999999999 7910.4 11190.6 10508.5 9978.9 True False 8225.608582309938 9047.58168627939 10017.25750011603 9605.92234636645 9529.722371181015 9280.367615642122 9828.800255241715 9031.723424583994 8655.946967716109 8134.62255152979 7500.863726370734 1.0966215201845653 1.206205313992157 1.3354805347147458 1.2806421629278473 1.2704833361626657 1.2372398638593045 1.3103557955181442 1.2040911225771542 1.1539933644287466 1.0844914463558315 1.0 12.872841016537937 -9.577395752929966 0.6717565311074258 1.0145456354061215 1.2530065319885384 0.5775203094030241 0.06486671696082863 0.2675158263899308 0.2619496333653058 0.02700963996511008 0.015337610359168084 2.6460877794542664e-10 9.577395752929966 0.23846089658241687 NSSTDQGS(ph)DEEGSLQK ddPTM_A549_PD325901_60min_R1 2 NSSTDQGSDEEGSLQK 16 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 NSSTDQGS(0.99)DEEGS(0.01)LQK;NSSTDQGS(0.998)DEEGS(0.002)LQK 222.28 9.805799999999998e-55 40946000.0 18579.6 18397.5 18615.6 18273.8 23849.0 20505.3 19668.9 19117.1 20437.4 19450.0 20112.6 True False 20465.78731442139 19947.921891031867 19878.9665606966 19402.53112318905 22173.928514583487 20338.311635310558 20417.410752735068 18735.794443425177 19578.48715097295 18221.923680642227 17638.877704275998 1.1602658433002286 1.130906525090092 1.1269972440410743 1.0999867139214592 1.2571054058166131 1.1530388710830604 1.1575232333395848 1.0621874451163786 1.1099621800896524 1.0330545959976176 1.0 14.106471150082982 -10.016444831716594 0.4268340334250431 0.9850294025255811 1.1552472671919676 0.5706877795280598 0.04364758056555193 0.6837181472373478 0.23202324689395412 0.04878101257187328 0.014449552583816375 9.628423147437716e-11 10.016444831716594 0.17021786466638644 NSSTDQGS(ph)DEEGSLQKEQESAMDK ddPTM_A549_MK2206_60min_R1 3 NSSTDQGSDEEGSLQKEQESAMDK 24 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 NSST(0.001)DQGS(0.998)DEEGS(0.001)LQKEQESAMDK;NSSTDQGS(0.999)DEEGS(0.001)LQKEQESAMDK;NSS(0.001)T(0.002)DQGS(0.997)DEEGSLQKEQESAMDK 98.63600000000001 1.0147e-08 28024500.0 4337.2 5983.1 5565.7 6368.5 7093.200000000001 6291.7 5086.7 6294.5 7660.5 6240.9 6523.0 True False 5069.21332564078 6287.614234113674 6354.999950803681 7928.782785892826 6049.799676305224 6957.48351790755 6010.887546688712 7186.764651097788 5925.408981304777 4831.076355506709 4903.159074358522 1.0338667884855404 1.2823598293996366 1.2961031560321348 1.6170763921074995 1.233857516053916 1.4189797663902621 1.225921381609491 1.4657416865550155 1.2084880158778033 0.985298719099534 1.0 12.259495852744045 -9.700393541370824 0.8274746023237727 1.026097704281885 1.3265113430596756 0.4094907165319823 0.14558717296613854 0.3756351501518752 0.5414997257013743 0.05106357453838691 0.029828943469147603 1.9934551020314467e-10 9.700393541370824 0.3004136387777905 NSSTDQGS(ph)DEEGSLQKEQESAMDK ddPTM_A549_PD325901_60min_R1 3 NSSTDQGSDEEGSLQKEQESAMDK 24 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 NSST(0.001)DQGS(0.993)DEEGS(0.006)LQKEQESAMDK;NSSTDQGS(1)DEEGSLQKEQESAMDK;NS(0.001)S(0.007)T(0.005)DQGS(0.986)DEEGS(0.001)LQKEQESAMDK 150.23 9.2652e-29 46794100.0 7711.4 7608.6 7762.9 7545.900000000001 10182.8 8174.0 8180.599999999999 8751.5 8299.9 8268.9 7391.8 True False 8494.255651167356 8249.80342438402 8289.737076109908 8011.993105017686 9467.595256752938 8107.433654081063 8491.917209596082 8576.94446708106 7951.084066679732 7746.800242820693 6482.655460480863 1.310304967300742 1.2725963109833505 1.27875638720047 1.2359122205182536 1.4604501680628668 1.2506346671522288 1.3099442445096685 1.3230603599662614 1.2265165278566177 1.1950041599536216 1.0 12.662369183407533 -10.038529115454594 0.5953821416462497 0.9955917920598537 1.3088518294741944 0.4357651495593877 0.0795287061708812 0.26257954355000596 0.1808209170252941 0.03898522321488742 0.013641247256766402 9.151049078489389e-11 10.038529115454594 0.3132600374143407 NSSTDQGS(ph)DEEGSLQKEQESAMDKHNLER ddPTM_A549_MK2206_60min_R1 1 NSSTDQGSDEEGSLQKEQESAMDKHNLER 29 2 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 NSSTDQGS(1)DEEGSLQKEQESAMDKHNLER 138.15 1.7525e-28 11331000.0 700.7 872.95 1143.2 1031.7 1256.5 562.82 663.34 1156.6 1260.9 1525.8 1529.0 True False 818.9610295297639 917.379426329082 1305.3229501695687 1284.4665463147735 1071.6705144754849 622.3772388303206 783.8602915879621 1320.551591938946 975.3081632435474 1181.1207202858773 1149.307101746771 0.7125693631276344 0.7982021732353395 1.1357477459120173 1.1176008086633946 0.9324492234031354 0.5415238780691448 0.6820285808698253 1.1489980266648572 0.8486053568808791 1.0276806942989862 1.0 10.16654863092155 -5.534619639347618 24.95507114113236 0.9242982581798201 0.7339774520438479 0.13404502193246082 0.18101994166414542 288.5335887856811 613274.434165836 0.025216227086914355 0.09781288818215353 2.9199832530601437e-06 5.534619639347618 -0.19032080613597224 NSSTDQGS(ph)DEEGSLQKEQESAMDKHNLER ddPTM_A549_PD325901_60min_R1 7 NSSTDQGSDEEGSLQKEQESAMDKHNLER 29 2 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 NSST(0.001)DQGS(0.998)DEEGS(0.002)LQKEQESAMDKHNLER;NSST(0.001)DQGS(0.999)DEEGSLQKEQESAMDKHNLER;NSST(0.001)DQGS(0.999)DEEGSLQKEQESAMDKHNLER;NSST(0.002)DQGS(0.98)DEEGS(0.018)LQKEQESAMDKHNLER;NSSTDQGS(1)DEEGSLQKEQESAMDKHNLER;NSSTDQGS(1)DEEGSLQKEQESAMDKHNLER;NSSTDQGS(1)DEEGSLQKEQESAMDKHNLER 202.03 5.410199999999999e-78 266207000.0 20440.6 20715.100000000002 23704.399999999998 25626.5 29881.7 32095.9 26230.0 31623.2 31598.5 27661.1 30142.699999999997 True False 22515.714664425584 22460.83417664977 25313.12313013689 27209.390702995763 27782.91247826868 31834.521631761727 27228.19700360674 30992.4504680795 30270.52493174372 25914.573425327137 26435.33899031852 0.8517278584046746 0.8496518310158858 0.9575486487768278 1.0292809452135538 1.050976213637498 1.2042410972456439 1.0299923527963304 1.1723871019558305 1.145077993621711 0.9803004014746282 1.0 14.690180206609357 -6.0911626130014085 1.4866089940078293 1.0842207763656793 0.8378631169489265 0.6465321389736746 0.06633242309420133 0.22119537141208342 0.8791891987877687 0.010395031322098127 0.0500594977584827 8.106574663240569e-07 6.0911626130014085 -0.2463576594167528 NSSWYS(ph)SGSR ddPTM_A549_PD325901_60min_R1 1 NSSWYSSGSR 10 0 Q86XZ4 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 1 NS(0.003)S(0.129)WYS(0.855)S(0.01)GS(0.004)R 68.515 0.0028144000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSSYFVEWIPNNVK ddPTM_A549_MK2206_60min_R1 1 NSSYFVEWIPNNVK 14 0 A0A0B4J269;Q13509;Q13509-2;Q5JP53;P07437;Q5ST81;K7ESM5;Q9BUF5;P68371;P04350;Q9BVA1;Q13885 A0A0B4J269;Q5JP53;P68371;Q9BVA1 TUBB3;TUBB;TUBB6;TUBB4B;TUBB4A;TUBB2B;TUBB2A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 152.85 1.617e-13 3465100.0 2396.2 3243.3 3054.3 3099.6 4975.5 4359.4 3585.1 3907.1 5840.5 4364.9 4926.9 False True 2800.6199785346375 3408.370116745646 3487.4456671648986 3859.0021391463315 4243.610541004992 4820.708814464478 4236.466263713938 4460.943389991921 4517.636075361996 3378.866058445291 3703.4147544775433 0.7562263921826744 0.9203317323896334 0.9416837968117043 1.0420118714709656 1.1458642421495824 1.3016929331601574 1.1439351367793518 1.2045486897189959 1.2198569090594116 0.9123650151148037 1.0 11.854640414166377 -5.948503078150196 1.2177868217370866 1.1334587908094858 0.7804878241015664 0.5654767916022518 0.10333567227217712 0.3501580058227233 0.8210296569328783 0.015680624183774364 0.11335130009019172 1.1258924888753638e-06 5.948503078150196 -0.3529709667079194 NSSYFVEWIPNNVK ddPTM_A549_PD325901_60min_R1 1 NSSYFVEWIPNNVK 14 0 A0A0B4J269;Q13509;Q13509-2;Q5JP53;P07437;Q5ST81;K7ESM5;Q9BUF5;P68371;P04350;Q9BVA1;Q13885 A0A0B4J269;Q5JP53;P68371;Q9BVA1 TUBB3;TUBB;TUBB6;TUBB4B;TUBB4A;TUBB2B;TUBB2A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-6 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 158.4 1.3083e-18 5809800.0 4382.3 3879.6 4437.3 4914.9 5266.6 5287.5 3963.7 4946.3 5307.3 4806.8 4971.8 False True 4827.187869921252 4206.547507457385 4738.441861652539 5218.4822104522245 4896.6921847836575 5244.44035306504 4114.540772519867 4847.642166202718 5084.252637632907 4503.297827666381 4360.300118836917 1.1070769759786339 0.9647380668327609 1.0867237879296456 1.1968172071247751 1.1230172353571433 1.2027704997664155 0.9436370571705955 1.1117680054316528 1.1660327268915378 1.0327953821829143 1.0 12.090211723576303 -11.051240363778486 1.3654956719608173 1.0001923729914253 1.1061950253795279 0.13673080830033768 0.07923001799819956 0.5903951387267031 1.9691501310098771 0.056963368298964305 0.012792664449777611 8.887091185013832e-12 11.051240363778486 0.10600265238810258 NST(ph)DSRPVSVTYR ddPTM_A549_MK2206_60min_R1 1 NSTDSRPVSVTYR 13 1 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 NS(0.196)T(0.494)DS(0.309)RPVS(0.001)VTYR 60.317 0.0032365000000000002 5066500.0 1388.4 1628.0 1263.5 1937.1 2321.3 1701.2 1661.9 2230.2 2964.3 2536.9 2848.1 True False 1622.727976879013 1710.8582462497804 1442.6832991071121 2411.689586959723 1979.8398450075154 1881.219854834833 1963.845718017961 2546.3376797010524 2292.890783014393 1963.8125280464299 2140.838166438835 0.7579872230969849 0.7991534685200881 0.6738871352928725 1.126516532060634 0.9247965941773492 0.8787305291572495 0.9173256291878937 1.189411567683672 1.0710248065263566 0.9173101259275113 1.0 11.063960026064828 -6.1857296211883375 0.6610697401015443 1.0366405401213084 0.6852396639171516 0.4128521761118674 0.11457072985295885 0.8422603657193842 0.47410371520972255 0.019106653584929762 0.1765831103940194 6.520342048040051e-07 6.1857296211883375 -0.3514008762041567 NST(ph)ELAPPLPVR ddPTM_A549_MK2206_60min_R1 1 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.48)T(0.52)ELAPPLPVR 174.72 7.3287e-16 24667000.0 2414.8 3134.6 3709.9 2915.9 4128.9 2936.9 2837.1 4007.1 4414.3 3188.8 3639.8 True False 2822.3592038082984 3294.137751040883 4236.019605348217 3630.295630899726 3521.5442795207564 3247.6808086435594 3352.5643459827684 4575.118696229077 3414.4680981885913 2468.447865282217 2735.937206630408 1.031587712235665 1.2040253493602497 1.5482883141771067 1.3268928914384017 1.2871436782198322 1.187045083042464 1.2253805890931981 1.6722308849565346 1.2480067488076105 0.9022311839979573 1.0 11.417819403510714 -10.085519015469131 0.9786675309569729 1.0259361013511745 1.3081484387327438 0.36662821212792585 0.17155367881480488 0.43813494179196405 0.8418355708816682 0.06588534779034967 0.032285087587406655 8.212605933692529e-11 10.085519015469131 0.28221233738156926 NST(ph)ELAPPLPVR ddPTM_A549_PD325901_60min_R1 1 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.336)T(0.664)ELAPPLPVR 150.69 3.1774e-12 79170000.0 1684.0 1485.9 1972.5 1896.5 2400.1 1756.3 1973.1 1910.0 1943.4 1637.7 2302.0 True False 1854.958440304721 1611.122007766504 2106.365711606075 2013.6424977359966 2231.525255895503 1741.997275099409 2048.1874002217473 1871.9035516339868 1861.7256563555463 1534.2953425083697 2018.8685935803103 0.9188108855639252 0.7980321319028008 1.0433396796126266 0.9974113739443311 1.1053345735286626 0.8628581774161482 1.0145223947386504 0.9272042556837777 0.9221628699735811 0.7599778149936016 1.0 10.979331294608505 -4.200126798772407 0.005122147999179417 1.8708550972881168 3.530774469912929e-08 0.0 0.10431107641240477 95950.70816662186 55.13634207113344 9556.917214330259 10605.574170011298 6.307731539322614e-05 4.200126798772407 -1.870855061980372 NST(ph)ELAPPLPVRR ddPTM_A549_PD325901_60min_R1 1 NSTELAPPLPVRR 13 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.407)T(0.593)ELAPPLPVRR 63.681999999999995 0.0039395 1872900.0 741.86 1001.0 798.77 821.33 903.17 1052.5 796.99 665.4 1083.4 789.43 942.19 True False 817.1730810715326 1085.357783009805 852.9793355942123 872.0616887242313 839.7344549673517 1043.9287889552631 827.3198905796619 652.1280750037981 1037.8684656249864 739.5852550750334 826.306603034506 0.9889465702810171 1.3135049133384225 1.0322794619597062 1.0553730122955518 1.016250447332181 1.2633673567675332 1.0012262851845002 0.78920835511775 1.256033125977145 0.8950494312389621 1.0 9.690533386192548 NST(ph)FSEIFKK ddPTM_A549_PD325901_60min_R1 1 NSTFSEIFKK 10 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 1 NS(0.026)T(0.973)FS(0.001)EIFKK 79.46600000000001 0.00077688 4629800.0 2290.0 2105.7 2210.8 2906.6 2809.6 2991.6 2568.4 2706.8 3298.3 2701.9 2356.1 True False 2522.4791141911023 2283.1547289547925 2360.8381826203854 3086.1340806324533 2612.2633885938108 2967.2374014618204 2666.1418674824095 2652.810750556477 3159.6839211472143 2531.3015728908617 2066.3146365484677 1.2207623512770558 1.1049405006241113 1.1425356723813775 1.4935450903970136 1.264213756408988 1.436004637908502 1.290288429614902 1.2838367902129761 1.5291397860033018 1.225032010187519 1.0 11.012844233941044 NST(ph)IENTRR ddPTM_A549_PD325901_60min_R1 1 NSTIENTRR 9 1 O15198;O15198-2;H0YAK7;Q99717;Q15797 O15198;Q99717 SMAD9;SMAD5;SMAD1 Mothers against decapentaplegic homolog 9;Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 1 NS(0.317)T(0.683)IENTRR 49.934 0.018026 6589500.0 807.73 832.51 1026.5 892.7 1115.3 837.57 1020.6 1216.9 1212.9 1242.1 1080.2 True False 889.730154980602 902.6685393940991 1096.1644628459496 947.8400515312013 1036.9651755761236 830.7491076154486 1059.439491493749 1192.6279748604184 1161.9260309733672 1163.6735940218882 947.3422479519778 0.9391855550663711 0.9528431159335952 1.157094455795363 1.000525473850976 1.0946045928152133 0.8769260627945313 1.1183281372535743 1.25891986495769 1.2265113621664079 1.2283560630148067 1.0 9.887741914540904 -7.950548132919379 24.999202880414767 1.124552876127278 1.0109940165120155 0.365921491888602 0.09986190325914343 145.69322347197004 73651.24844291233 0.017970078271940606 0.024829229365729347 1.1206032226390162e-08 7.950548132919379 -0.11355885961526258 NST(ph)PPSLAR ddPTM_A549_MK2206_60min_R1 1 NSTPPSLAR 9 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 NS(0.336)T(0.656)PPS(0.008)LAR 108.9 0.00045045 10581000.0 2531.8 2384.4 3010.9 2799.7 4158.2 3014.8 2760.1 2867.4 4623.2 4751.4 4984.8 True False 2959.1059434329345 2505.7557754041623 3437.890894563988 3485.626625683309 3546.5342883342337 3333.8241349377236 3261.57444268691 3273.8627310442107 3576.0525817333396 3678.0554400093824 3746.936586518837 0.7897400650119217 0.6687478470865136 0.9175204370773795 0.9302603727600571 0.9465156952734044 0.8897466124547031 0.8704642759158991 0.8737438319141279 0.954393675782952 0.9816166767387302 1.0 11.871495846239187 -2.6225619948215706 0.20917963882971968 0.9967620181253842 1.1428355561200628e-15 0.5386617756245082 0.06135756181486983 19.47262493255894 0.277855697637917 0.04622007012180825 6.187623106409887 0.0023847233558380847 2.6225619948215706 -0.9967620181253831 NST(ph)PSSSSSLQK ddPTM_A549_MK2206_60min_R1 1 NSTPSSSSSLQK 12 0 Q9P0U3;Q9P0U3-2;F8VRZ8 Q9P0U3 SENP1 Sentrin-specific protease 1 1 NS(0.003)T(0.994)PS(0.003)SSSSLQK 130.1 7.942999999999999e-08 4355800.0 2054.4 3134.3 1922.6 3294.8 4429.2 2560.3 2834.4 2371.0 4944.0 3765.8 3891.1 True False 2401.1324947423254 3293.822482322288 2195.253589919534 4102.0261479091905 3777.67054732576 2831.2292466104063 3349.373790932133 2707.0965108829705 3824.191893945673 2915.103164538313 2924.832481103243 0.8209470150019058 1.126157652994835 0.750557033301096 1.4024824240060105 1.2915852691504668 0.9679970613368155 1.145150641129626 0.925556088553098 1.3074909139764452 0.9966735474158643 1.0 11.514138281801715 -6.247023528418614 24.97970466467167 1.143990005044337 0.9219143022469586 0.26169050935417193 0.1699550364293463 891.0716944141886 1544041.2982490913 0.024075823237657685 0.06339076100429819 5.662086131841889e-07 6.247023528418614 -0.22207570279737843 NST(ph)PSSSSSLQK ddPTM_A549_PD325901_60min_R1 1 NSTPSSSSSLQK 12 0 Q9P0U3;Q9P0U3-2;F8VRZ8 Q9P0U3 SENP1 Sentrin-specific protease 1 1 NS(0.001)T(0.977)PS(0.021)SSSSLQK 126.19 2.3031e-06 8938100.0 9569.6 9115.5 9026.5 9104.2 12722.0 10958.0 10747.0 9941.3 10108.0 10715.0 11146.0 True False 10541.098747232823 9883.695175850029 9639.092570753977 9666.545756861615 11828.450608517393 10868.761681113323 11155.982965984054 9743.012972701015 9683.195911516865 10038.453071366659 9775.11266031544 1.0783608448859212 1.011108057708164 0.9860850616981969 0.9888935394172406 1.2100577271644142 1.1118809632995668 1.1412638763003324 0.9967161823367272 0.9905968604155596 1.0269398850123044 1.0 13.25489761455438 -8.36964496343896 12.083739556610784 0.9954683762846834 1.0727222969174237 0.22366906446529256 0.0635959290411008 0.7535965850504716 80.5432114385658 0.010969133333658971 0.013260749913771836 4.269283909480839e-09 8.36964496343896 0.07725392063274028 NST(ph)TIMSR ddPTM_A549_PD325901_60min_R1 1 NSTTIMSR 8 0 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 NS(0.176)T(0.587)T(0.207)IMS(0.031)R 48.028 0.017155 8638800.0 4033.8 4128.7 4083.8 4841.1 5595.6 5725.5 4795.9 4688.5 5703.4 5458.2 5206.8 True False 4443.308406473392 4476.640038673911 4360.9512258843515 5140.123752064189 5202.584359772039 5678.873426283477 4978.410598917175 4594.984189442901 5463.70593210776 5113.568320497762 4566.396608624659 0.9730447850458745 0.9803441142669861 0.9550092993779212 1.1256411110580973 1.1393194252872816 1.2436224693136941 1.0902273774280438 1.0062604244152267 1.1965027132746928 1.1198257091466053 1.0 12.156840453126811 -6.259885341938016 24.948693580016307 1.104137339304965 0.970553864508636 0.47115903717527596 0.06802100824582782 122.97893975847256 1974293.7655538563 0.012042222550552255 0.03012669716350531 5.496859772666594e-07 6.259885341938016 -0.13358347479632893 NSTDS(ph)RPVSVTYR ddPTM_A549_MK2206_60min_R1 1 NSTDSRPVSVTYR 13 1 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 NS(0.055)T(0.102)DS(0.841)RPVS(0.001)VT(0.001)YR 58.688 0.0030511999999999996 7778400.0 1022.7 1166.7 1593.8 1239.1 2161.5 1682.7 1769.9 1648.4 2327.1 2392.9 2270.6 True False 1195.3067573855994 1226.0800466213875 1819.8248057909875 1542.6795556253117 1843.5462133217368 1860.762197114141 2091.4679200433175 1882.0657480132793 1800.0155656150841 1852.342228058775 1706.7473546280037 0.7003419423175986 0.7183723140374337 1.0662531867158684 0.9038710688153071 1.0801517918412413 1.0902388054497414 1.225411549267739 1.1027207646813593 1.054646758780188 1.0853054630704289 1.0 10.737033800437684 -5.758426590796647 24.630070594507515 1.0465329618528343 0.7093569302298854 0.7663006833349244 0.07557859080823963 23.348813888732654 190867.53997100305 0.011022307796957634 0.03929410934653738 1.7441081407852256e-06 5.758426590796647 -0.33717603162294885 NSTFSEIFK ddPTM_A549_MK2206_60min_R1 2 NSTFSEIFK 9 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 114.5 0.00060152 5326200.0 4932.200000000001 5574.1 5182.1 5422.2 6959.3 5657.4 5757.3 5502.0 8141.200000000001 7614.099999999999 6943.2 False True 5764.63477928743 5857.797881093915 5916.999702653712 6750.639243411809 5935.596188928967 6256.06231292181 6803.326886301713 6281.925349168321 6297.231198824939 5894.0695217778875 5219.011817428499 1.1045452627711752 1.1223959795477445 1.133739472076751 1.293470771778779 1.1373026918826834 1.198706293791127 1.3035661010734854 1.2036618365550165 1.2065945468442527 1.1293458853829539 1.0 12.349560953324138 -10.637028794761656 0.8801997521993994 0.9983592236990849 1.191286479308526 0.2488166855507722 0.07192120927284021 0.3651859483594341 0.4977693170436638 0.04533563838334666 0.011811908311450053 2.3065942509408877e-11 10.637028794761656 0.19292725560944113 NSTFSEIFK ddPTM_A549_PD325901_60min_R1 2 NSTFSEIFK 9 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 125.97 0.00018627 9845200.0 8655.2 8580.2 9310.7 8540.599999999999 10673.3 9842.2 9574.3 9751.2 10870.5 10510.5 10480.4 False True 9533.869532378529 9303.283566214515 9942.580091787417 9068.133464890083 9923.644228886069 9762.048386371012 9938.65522575799 9556.704666331581 10413.650688182031 9846.865236266853 9191.377240729398 1.0372623473804836 1.0121751422615135 1.0817290849220333 0.9865913700839968 1.0796689080404407 1.0620876644158201 1.0813020688256822 1.0397467556856792 1.1329804462857231 1.0713155361127835 1.0 13.166065336546477 -6.818209371993036 24.999902190200736 1.0647154007879187 1.0319396960781744 0.18882869538043145 0.03689699999719579 163.26178340475025 71894.98570665359 0.007244680719881187 0.013691163948274255 1.5198146552608878e-07 6.818209371993036 -0.032775704709744335 NSTFSEIFKK ddPTM_A549_MK2206_60min_R1 1 NSTFSEIFKK 10 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 59.57 0.009025100000000001 14892000.0 2591.1 3057.7 3184.6 2625.5 3459.1 3277.3 3211.8 3159.4 4497.8 3643.3 3633.7 False True 3028.414333687129 3213.3238695073405 3636.2241664713174 3268.747617863174 2950.270972242063 3624.101710704329 3795.342485787408 3607.2546252567067 3479.055481510688 2820.275999618259 2731.352004981843 1.1087601774372031 1.176459080941016 1.3312909357120704 1.1967507710105287 1.0801504042177366 1.3268526737286725 1.3895471835431326 1.3206846348172125 1.2737484861581638 1.0325567683968317 1.0 11.415399539122815 -10.64979690260148 0.9489866799883385 1.0018490502456945 1.2475692270009169 0.468407386187504 0.0933781505019892 0.3938858869461 0.6388699388730222 0.0642643014599137 0.017734120947038794 2.2397683192020995e-11 10.64979690260148 0.2457201767552224 NSTFSEIFKK ddPTM_A549_PD325901_60min_R1 2 NSTFSEIFKK 10 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 81.92 0.0010949999999999998 47395000.0 10035.4 9215.6 10276.4 10963.7 13607.0 12671.2 13167.2 12414.599999999999 12461.5 12133.4 11750.5 False True 11054.186420328988 9992.230954151017 10973.818301013258 11640.90284863071 12651.29126160164 12568.009948322964 13668.285001368316 12166.981063934707 11937.78649103357 11367.295053301003 10305.262992556656 1.072673878222542 0.969624061158678 1.0648751331178534 1.1296075468465743 1.2276534107610342 1.2195719757371217 1.3263402410244864 1.1806570169749906 1.1584164809433841 1.1030572496317113 1.0 13.331093702788174 -6.075766682780491 3.9421048383619692 1.125810141973462 1.0199103258827473 0.22670473166999972 0.08806125617574793 0.3668691025608353 10.766729863265455 0.016056689520536 0.04718838581291361 8.399110930815575e-07 6.075766682780491 -0.10589981609071475 NSTSS(ph)IEPR ddPTM_A549_PD325901_60min_R1 2 NSTSSIEPR 9 0 A0A0D9SEY1;O95819-2;O95819-3;G5E948;C9J840;A0A0D9SG62;O95819-6 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 NS(0.049)T(0.304)S(0.142)S(0.504)IEPR;NS(0.022)T(0.104)S(0.254)S(0.62)IEPR 81.625 0.0015780999999999998 8110200.0 1601.29 1632.74 1442.9299999999998 1537.96 1761.03 1689.21 1653.23 1499.97 1542.0 1897.8000000000002 2058.86 True False 1763.851781992606 1770.3367299015292 1540.8559068429668 1632.956296239416 1637.3413280236896 1675.453633815791 1716.1445723321683 1470.0519216462997 1477.1951024494463 1777.972584119425 1805.6332721888612 0.9768604783486261 0.9804519872163499 0.8533603863951174 0.904367637321991 0.9067961657789119 0.9279036112270675 0.9504391610217666 0.8141475593569694 0.8181036122904022 0.9846808936811932 1.0 10.818289192918789 -5.732125884691474 24.39726213927196 0.9050093792466102 0.9786564142317908 0.18842781589754853 0.05756019653854027 247.84390152762893 206272.65234191096 0.00977407425323851 0.037841181067338484 1.8529944362001105e-06 5.732125884691474 0.07364703498518066 NSTT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 NSTTLPR 7 0 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 NS(0.003)T(0.05)T(0.947)LPR;NS(0.002)T(0.026)T(0.972)LPR 72.607 0.020808 1183920000.0 5909.8 6967.2 7512.7 8028.900000000001 10020.0 8888.8 8012.5 8147.4 12468.4 11223.5 11897.7 True False 6907.229759262166 7321.800720682719 8578.113827623265 9995.980860431015 8546.071273413741 9829.406916092094 9468.267534520073 9302.318900366052 9644.327307943408 8688.103554940722 8943.172730184793 0.7723466791543723 0.8187028185165588 0.9591801574703585 1.1177219944207057 0.955597250690377 1.0990961723143402 1.0587145994131357 1.0401586977034534 1.078401099801203 0.9714788942426252 1.0 13.12657102547521 -5.830489843276431 2.771088114971824 1.042602021450979 0.7819640288579512 0.7900873955397689 0.04835489267158741 0.07532249769690133 1.13941412078813 0.006138063619720872 0.026144708689630865 1.4774410336857726e-06 5.830489843276431 -0.2606379925930278 NSTT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 NSTTLPR 7 0 K7EM16;P50552 K7EM16 VASP Vasodilator-stimulated phosphoprotein 1 NS(0.002)T(0.036)T(0.962)LPR;NS(0.003)T(0.043)T(0.954)LPR 69.375 0.023383 1507100000.0 15113.3 15523.7 17972.3 18399.7 18640.699999999997 18622.6 17821.6 20038.7 20655.0 19184.1 18865.699999999997 True False 16647.591090176586 16831.936679429888 19192.00835421943 19536.207680249412 17331.44153892391 18470.943719903356 18499.810740353703 19639.01240844396 19786.942179697344 17972.812652021003 16545.33849952565 1.006180144978833 1.0173219895085528 1.1599646846010228 1.1807680864800385 1.0475120553998214 1.116383549386609 1.1181282716508996 1.1869816026433673 1.1959224757030285 1.0862765154388518 1.0 14.014137187464113 -5.691824081467149 8.603297537994607 1.1100635946476978 1.0105213079611668 0.3303755036039022 0.05840887037634631 0.3626210373779539 40.273350594353346 0.01087129856219372 0.04228792034350176 2.03318041924555e-06 5.691824081467149 -0.09954228668653098 NSTWSGESK ddPTM_A549_MK2206_60min_R1 1 NSTWSGESK 9 0 P19338 P19338 NCL Nucleolin 0 98.943 0.0022718000000000005 3925000.0 1853.2 1639.2 1361.7 1626.2 2711.8 2269.1 2262.8 1936.1 2791.3 2892.6 3128.9 False True 2165.974853610047 1722.628278410712 1554.8095357294458 2024.619073002892 2312.897812299737 2509.214655893322 2673.9214698423743 2210.5481040575783 2159.0750067901613 2239.1596510020527 2351.907776753087 0.9209437865800466 0.7324387016521867 0.661084397567633 0.8608411830662716 0.9834134803928387 1.0668847990959083 1.1369159523482002 0.9398957416218666 0.9180100632053099 0.9520609919889426 1.0 11.199615774840817 -6.589417625809101 3.8582232610210503 0.9814670517328076 0.7660232568605959 0.595599160656786 0.08267991750531582 0.12814642623380126 3.8307380619705076 0.012606114046619522 0.02777148119778502 2.573844908519118e-07 6.589417625809101 -0.21544379487221166 NSTWSGESK ddPTM_A549_PD325901_60min_R1 2 NSTWSGESK 9 0 P19338 P19338 NCL Nucleolin 0 ; 94.69200000000001 0.0026062 4865400.0 3928.3 3209.5 3350.7 3503.0 3652.8 3959.0 3491.0 3366.2 4056.3 4167.2 4578.799999999999 False True 4327.098124138384 3479.9758287412274 3578.0986513959306 3719.3723541097766 3396.2399294758943 3926.7592166022687 3623.8519153484986 3299.058500267187 3885.827817163219 3904.0822808212 4015.636627404661 1.077562171489362 0.866606257396941 0.8910414420909606 0.9262223401208584 0.8457537981146745 0.9778671680112067 0.9024352180218617 0.8215530453509673 0.9676741642021185 0.9722200096935665 1.0 11.97141301123178 -8.976483628332348 21.366162469344403 0.9857389866333288 0.9101961350214869 0.1698411281611263 0.06576221702226208 34.07205918495912 30957.907674663715 0.010791150516343974 0.011148453169114395 1.0556412971425121e-09 8.976483628332348 -0.07554285161184193 NSVAGSNPAKPGLGS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 NSVAGSNPAKPGLGSPGR 18 1 Q86XL3;Q86XL3-3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 NSVAGS(0.001)NPAKPGLGS(0.999)PGR;NSVAGSNPAKPGLGS(1)PGR 99.838 6.7039e-08 25477000.0 3119.3 4224.700000000001 3711.1000000000004 3873.7000000000003 5636.8 4081.6000000000004 4693.8 4627.4 6064.3 5759.2 5288.2 True False 3645.7615804369802 4439.719184847324 4237.389783392485 4822.7566738970045 4807.634187023809 4513.512202853194 5546.602702468684 5283.3481208181565 4690.745732697156 4458.192720061887 3974.993993104823 0.917174110642949 1.1169121745966488 1.0660116193239093 1.2132739526808702 1.2094695477183905 1.1354764839097884 1.3953738576938817 1.3291461899018853 1.1800636028215146 1.1215596118623672 1.0 11.95673696490199 -4.757169608040512 1.3679536527792073 1.1437754305456327 0.4300143309773889 0.27658359233584306 0.1107525933750537 5.936647010189662 3.739927427565652 0.019717123319644793 8.232665576189598 1.7491634422685324e-05 4.757169608040512 -0.7137610995682437 NSVAGSNPAKPGLGS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 NSVAGSNPAKPGLGSPGR 18 1 Q86XL3;Q86XL3-3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 NSVAGSNPAKPGLGS(1)PGR;NSVAGSNPAKPGLGS(1)PGR 139.36 5.3972e-14 35993000.0 5075.8 5438.200000000001 5714.700000000001 5672.4 6216.799999999999 6157.299999999999 5693.6 6312.7 6098.9 5797.200000000001 6278.8 True False 5591.091479393533 5896.4961993645575 6102.533907282754 6022.7712650449075 5780.153414795695 6107.156990246305 5910.273063657467 6186.788246282654 5842.584442496056 5431.163802643659 5506.547404592549 1.0153533727377835 1.0708154794866171 1.1082323385054567 1.0937472834651019 1.049687397583276 1.1090718995995272 1.0733173855414744 1.1235330946434372 1.0610249968289107 0.9863101874168887 1.0 12.426932319701972 -9.993714314011015 0.8433789860851973 1.0053709971404912 1.0806875841790025 0.5342275838919512 0.02999440580827354 0.3251548518703047 0.4686403230128492 0.012308934417217903 0.005853163854756286 1.0145785725916146e-10 9.993714314011015 0.0753165870385113 NSVHEQEAINS(ph)DPELSNCENFQK ddPTM_A549_MK2206_60min_R1 2 NSVHEQEAINSDPELSNCENFQK 23 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 NSVHEQEAINS(0.977)DPELS(0.023)NCENFQK;NSVHEQEAINS(0.942)DPELS(0.058)NCENFQK 67.979 0.00014659999999999999 3571200.0 1716.25 2320.6000000000004 1668.83 1915.72 2745.8900000000003 1916.7800000000002 1776.52 1888.02 2836.9 2351.1000000000004 3221.6 True False 2005.9110417160814 2438.708627915996 1905.4951880086433 2385.0714859999384 2341.9732184584873 2119.612387344411 2099.290688352649 2155.652616818754 2194.3466795983977 1819.9848770901356 2421.587808363242 0.8283453669482596 1.0070700800085075 0.786878419782173 0.9849205045395463 0.967122980372714 0.8752985871600762 0.8669066969624221 0.8901814790171766 0.9061602771619348 0.7515667492232166 1.0 11.241737601619137 -10.49277628838726 0.7826718162966616 1.0011227213953573 0.9034751715329744 0.0 0.0965064631412594 0.7127268339611098 0.7748103800375987 0.040802833941672764 0.011272486688666428 3.215316369902982e-11 10.49277628838726 -0.09764754986238289 NSVLSDPGLDS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NSVLSDPGLDSPR 13 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 NSVLS(0.009)DPGLDS(0.991)PR;NSVLSDPGLDS(1)PR 101.2 0.00014509999999999998 4006800.0 2639.0 2704.2 2643.0 2767.6 3607.7 2878.3 2854.9 2895.3 3636.6000000000004 3199.1 4939.6 True False 3084.398682644568 2841.83222942792 3017.8171424931516 3445.6621242422866 3077.0121090912903 3182.8797955390896 3373.598375575834 3305.7176414843766 2812.9159064568844 2476.421088128556 3712.9609939753745 0.8307113076731193 0.7653816547060575 0.8127791127862214 0.9280092437903859 0.8287219052621424 0.857234913241375 0.9086005430840269 0.8903184404167487 0.7575937132173225 0.6669666317924644 1.0 11.858354443890862 -11.00049029531856 1.2614132163937533 1.000560426771694 0.8358146682891002 0.0 0.11065076136885699 0.29114202312126364 0.8199445695350087 0.0413255081305875 0.009282634104049116 9.988716903288922e-12 11.00049029531856 -0.16474575848259387 NSVLSDPGLDS(ph)PRT(ph)SPVIMAR ddPTM_A549_MK2206_60min_R1 3 NSVLSDPGLDSPRTSPVIMAR 21 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 2 NS(0.004)VLS(0.05)DPGLDS(0.921)PRT(0.537)S(0.487)PVIMAR;NS(0.001)VLS(0.035)DPGLDS(0.944)PRT(0.54)S(0.48)PVIMAR;NSVLSDPGLDS(0.994)PRT(0.586)S(0.42)PVIMAR 81.34100000000001 7.0415e-05 20961000.0 4045.6000000000004 4424.3 4000.7 4301.8 6161.8 5198.2 4531.6 4577.6 7128.8 6644.200000000001 6510.6 True False 4728.398374576301 4649.477972286797 4568.059418075047 5355.741193115141 5255.407382487101 5748.270073714102 5354.933062019492 5226.488818312053 5514.13818235435 5143.270605402697 4893.838336581117 0.9661942322924394 0.9500677489757391 0.9334307968305994 1.094384576025189 1.0738825071525717 1.1745933719849642 1.0942194436607606 1.067973328674222 1.1267511926449496 1.0509686368176672 1.0 12.25675072877147 -6.260670760642377 24.998894021341158 1.075131247292869 0.9499146026859598 0.6608930510712308 0.04275775568114458 43.30189025100128 1408341.3031237775 0.007902628635342279 0.019628326197927332 5.48692772177596e-07 6.260670760642377 -0.12521664460690907 NSVLSDPGLDS(ph)PRT(ph)SPVIMAR ddPTM_A549_PD325901_60min_R1 2 NSVLSDPGLDSPRTSPVIMAR 21 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 2 NSVLS(0.012)DPGLDS(0.964)PRT(0.61)S(0.414)PVIMAR;NSVLS(0.044)DPGLDS(0.954)PRT(0.626)S(0.376)PVIMAR 109.25 2.3909e-10 52523000.0 7438.4 7427.6 9105.2 8141.9 9887.4 8600.3 8203.4 9271.400000000001 8443.3 9277.400000000001 9924.4 True False 8193.540892139341 8053.5499191644685 9723.133626015531 8644.806671403481 9192.94313367826 8530.262008220374 8515.584876072728 9086.4746537274 8088.457463366667 8691.623380709016 8703.761715955012 0.9413792747932912 0.9252953127613054 1.1171185452138346 0.9932264868368973 1.0562034478524982 0.9800661238902494 0.9783798263298805 1.0439709806244846 0.9293059400442432 0.9986053920543637 1.0 13.087423344936493 -8.762717178691817 24.999962578285306 0.9666166964908903 1.0052403223033421 0.04470659651358411 0.054031016384612274 63.61650645472045 1244639.7359454485 0.009477136524096087 0.010361815454608866 1.726962158396207e-09 8.762717178691817 0.03862362581245182 NSVLSDPGLDS(ph)PRTS(ph)PVIMAR ddPTM_A549_PD325901_60min_R1 1 NSVLSDPGLDSPRTSPVIMAR 21 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 2 NSVLS(0.067)DPGLDS(0.925)PRT(0.266)S(0.741)PVIMAR 104.51 2.7067e-10 19983000.0 2971.6 3161.1 4044.5 4521.9 4775.1 3621.9 4279.0 4644.0 4147.1 4341.8 4627.9 True False 3273.2746444236996 3427.4969908814137 4318.9840915542545 4801.207493019982 4439.713449200705 3592.4044472371197 4441.839686558645 4551.371776852477 3972.8118089287245 4067.658007023776 4058.697638675204 0.8064839847227758 0.8444819732864309 1.0641305354699964 1.18294288474939 1.0938763722862264 0.8851126068138728 1.0944002441158691 1.1213872483337008 0.9788390667666209 1.0022076954595456 1.0 11.986801152061126 -5.70385334289168 6.245106106398587 1.021992141724821 0.8200601523477414 0.5167845132166704 0.07976333524581465 0.1354794240749124 10.579178539610519 0.0116280430619858 0.04571151454764206 1.977637356655984e-06 5.70385334289168 -0.20193198937707957 NSVS(ph)PGLPQR ddPTM_A549_MK2206_60min_R1 1 NSVSPGLPQR 10 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 NS(0.356)VS(0.644)PGLPQR 51.013000000000005 0.026023 4250200.0 2014.8 2308.8 2106.7 2377.2 2535.1 1524.8 1635.3 2122.8 3472.5 3019.5 2638.9 True False 2354.848982869372 2426.3080583178707 2405.4617382104866 2959.6141067165636 2162.1901482266626 1686.1533239196767 1932.4128423339398 2423.7134008023477 2685.984294443033 2337.3928528661727 1983.58830006511 1.1871661991513438 1.2231913538904362 1.2126819552885693 1.4920505966986275 1.090039776981791 0.8500520616421915 0.9742005648402492 1.2218832913678666 1.354103719181479 1.1783659203824954 1.0 10.953896905604115 -11.163688574981975 1.573371030754523 1.0004604762005576 1.1994913185405367 0.0 0.1717066259577865 0.6474030139466501 2.8868678256722267 0.13161428740146774 0.028203031812540122 6.859799544188728e-12 11.163688574981975 0.19903084233997914 NSVTPLAS(ph)PEPTKKPR ddPTM_A549_MK2206_60min_R1 2 NSVTPLASPEPTKKPR 16 2 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NSVTPLAS(0.99)PEPT(0.01)KKPR;NSVTPLAS(0.992)PEPT(0.008)KKPR 57.496 0.0017640999999999998 6652300.0 2184.0 2609.6 2921.4 2337.0 3870.3 3576.9 2780.8999999999996 3142.4 4298.0 4102.9 4388.4 True False 2552.6058063265377 2742.41749349719 3335.698448762578 2909.565104911916 3300.98399695541 3955.405183845942 3286.1535334473506 3587.8448231963907 3324.509862495653 3176.052040412196 3298.639166321469 0.7738360207409765 0.8313784428126589 1.011234718492243 0.882050129828709 1.000710847872626 1.1991021098124157 0.9962149140161815 1.0876742324009432 1.0078428390829526 0.962837061064191 1.0 11.687655256735907 -5.4891235365160975 0.9590564450161503 1.0208498402023793 0.6817581545802481 0.5625576203717391 0.07377275817410082 0.7996897654006315 0.7029053417970842 0.010794753461078997 0.2565895500404412 3.2424737098228367e-06 5.4891235365160975 -0.3390916856221312 NSVTPLAS(ph)PEPTKKPR ddPTM_A549_PD325901_60min_R1 2 NSVTPLASPEPTKKPR 16 2 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NSVTPLAS(0.994)PEPT(0.006)KKPR;NSVTPLAS(1)PEPTKKPR 100.92 2.5930999999999996e-07 16728000.0 2589.9 3080.8 3181.4 3205.2 3903.1 3749.2 3646.1 4279.0 3500.3 3757.5 4398.6 True False 2852.8247414163907 3340.42982806854 3397.308935312326 3403.1779244626473 3628.959720964014 3718.667758243296 3784.8543307224786 4193.651988189438 3353.194563621138 3520.2508087410397 3857.6000850227433 0.739533564532149 0.8659347144453533 0.8806794018131863 0.882200811244171 0.9407298944889512 0.9639847771367341 0.9811422250370891 1.087114240916633 0.8692436980805823 0.9125494429576894 1.0 11.913487872512626 -4.02983868412085 0.5783129555293899 0.9538540880572957 1.6503793730366722e-08 0.59578284469801 0.05473452234215967 7.880117263332827 0.6121899984106441 0.011157928179020714 6.995002963566084 9.336010164655492e-05 4.02983868412085 -0.9538540715535019 NSYATTENKT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 NSYATTENKTLPR 13 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 NSYATTENKT(1)LPR;NSYATTENKT(1)LPR 156.22 9.0902e-19 207054000.0 9481.6 10979.5 10764.9 11377.5 16420.4 12338.7 11399.1 12234.599999999999 18372.4 15059.400000000001 16227.4 True False 11081.862277136312 11538.3096527638 12291.52469058816 14164.988010755389 14004.980911972347 13644.373044233818 13470.168917659641 13968.892016891083 14211.08073469408 11657.471080792477 12197.688726543856 0.9085214851417422 0.9459422937769222 1.007692929877781 1.1612845948372512 1.1481667737180055 1.1186031509839873 1.1043214185607715 1.145208107048415 1.165063402853428 0.9557114747012857 1.0 13.574320184825485 -5.95172819476197 3.076632240542828 1.0984959229339484 0.9258948260894544 0.5282885926909962 0.06379207616588498 0.15797582186279024 3.02344357849298 0.009601936326542038 0.03435879253958561 1.1175624606614818e-06 5.95172819476197 -0.17260109684449398 NSYATTENKT(ph)LPR ddPTM_A549_PD325901_60min_R1 3 NSYATTENKTLPR 13 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 NSYATTENKT(1)LPR;NSYATTENKT(1)LPR;NSYATT(0.002)ENKT(0.998)LPR 167.05 3.2219999999999996e-20 366300000.0 20574.0 19719.0 23922.0 24279.0 26741.0 26186.0 25454.0 27887.0 27728.0 25236.0 27927.0 True False 22662.657334221694 21380.789333836507 25545.490774671976 25778.658688390333 24862.804411441874 25972.74989794063 26422.66589896326 27330.77190807171 26562.688586717406 23642.5946531973 24492.156043838982 0.925302668072887 0.872964768620885 1.0430070235118383 1.0525271291857121 1.0151333499157633 1.060451756531826 1.0788215562431016 1.115898978397485 1.0845385983648126 0.9653129194048479 1.0 14.580032159447306 -5.769109760567658 24.706722102499302 1.0490341267904566 0.8991337096613246 0.6534247496528983 0.04126426556323541 56.38977273323281 181637.70907682955 0.0056999107310229434 0.01822591346646318 1.7017283710460888e-06 5.769109760567658 -0.14990041712913205 NSYNNSQAPS(ph)PGLGSK ddPTM_A549_MK2206_60min_R1 2 NSYNNSQAPSPGLGSK 16 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 NSYNNSQAPS(1)PGLGSK;NSYNNSQAPS(1)PGLGSK 260.96 1.3305999999999997e-78 30645000.0 9993.4 12129.0 12573.7 11753.5 17069.0 14242.0 12617.8 13048.1 17911.7 16741.6 16733.4 True False 11680.04160482766 12746.314292852318 14356.839729309919 14633.108027634657 14558.172711167574 15749.07898692552 14910.29093255131 14897.70813313036 13854.728549107349 12959.660932453833 12578.034961654292 0.9286062282729952 1.0133788252068823 1.1414215156086411 1.163385860529527 1.157428227505328 1.2521096526554865 1.1854229200353785 1.1844225412433564 1.10150183167285 1.0303406670408355 1.0 13.618618930342643 -3.97534596284847 15.953276292150328 1.0882813209667548 1.1034964028794858 0.0 0.09591531568539126 0.0 0.0 0.01414713542071037 0.0 0.00010584102502394035 3.97534596284847 0.015215081912731021 NSYNNSQAPS(ph)PGLGSK ddPTM_A549_PD325901_60min_R1 2 NSYNNSQAPSPGLGSK 16 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 NSYNNSQAPS(1)PGLGSK;NSYNNSQAPS(1)PGLGSK 269.91 1.4301999999999996e-91 52367000.0 9908.2 9358.1 10230.400000000001 11113.5 13753.0 10706.2 12393.2 11877.3 12766.1 11579.9 12984.5 True False 10914.073169968671 10146.73992925481 10924.696464392797 11799.955654410227 12787.036725274293 10619.0122568293 12864.83000781926 11640.397933938406 12229.585212308606 10848.7431377619 11387.488815527173 0.9584266862319122 0.8910428008868325 0.9593595779867335 1.036221053259841 1.1229022423134059 0.9325157134161105 1.1297337118151711 1.0222093845718105 1.0739492622493916 0.9526896854528034 1.0 13.475162016602777 -6.158666357262366 3.5605911967566546 1.04059905479804 0.9250675541104944 0.34659434051257487 0.06003955903234517 0.16291435174340488 3.8134876437137653 0.007261187610275291 0.020980935853127873 6.939587286886645e-07 6.158666357262366 -0.11553150068754559 NSYVAGQYDDAASYQR ddPTM_A549_MK2206_60min_R1 1 NSYVAGQYDDAASYQR 16 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 179.56 1.9158999999999996e-60 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NSYVAGQYDDAASYQR ddPTM_A549_PD325901_60min_R1 1 NSYVAGQYDDAASYQR 16 0 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 299.66 2.2146999999999994e-124 12792000.0 3684.8 3765.1 3454.2 4111.8 4520.9 4253.0 4176.0 4197.8 4614.2 5022.0 4554.6 False True 4058.878183393611 4082.398190619597 3688.622783791988 4365.77654742466 4203.36758025831 4218.364978077658 4334.919965194884 4114.071585889605 4420.2812203127305 4704.9100629401155 3994.413073988222 1.0161388189481924 1.0220270450255475 0.9234455013710142 1.09297072349747 1.0523116919556488 1.0560662855696672 1.085245788279649 1.0299564691194818 1.10661595043782 1.1778726876242915 1.0 11.963767818490373 -6.2785861759736905 24.997074911731907 1.0552200032639873 0.9906861034909826 0.31387939154464584 0.052101262474666274 741.9884663699471 1081689.935062211 0.006303353889647597 0.01467975519278996 5.265187287262051e-07 6.2785861759736905 -0.06453389977300472 NT(ph)ETSKSPEKDVPMVEK ddPTM_A549_PD325901_60min_R1 1 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.379)ET(0.236)S(0.236)KS(0.15)PEKDVPMVEK 69.922 0.00069509 98192000.0 6060.3 6121.7 5844.2 5944.2 6594.6 6445.1 6348.7 6965.9 6047.3 5943.8 7009.7 True False 6675.53719464294 6637.597143108016 6240.822556029517 6311.359733742318 6131.418046134944 6392.613242466095 6590.303252641946 6826.959659857166 5793.1530110522235 5568.5074536247475 6147.551338149394 1.0858855546625636 1.0797139833412341 1.0151720925535532 1.0266461208020161 0.9973756555859351 1.0398633359588132 1.0720208567832528 1.110516900849875 0.9423513025588078 0.9058090201001954 1.0 12.585796162467874 -8.775431459557405 24.99992267494839 0.9727770028494529 1.0504125235371304 0.5617483139411688 0.039403315341490205 151.00760432143147 269807.2598924901 0.006726148243773303 0.0071779534787276 1.67713700096253e-09 8.775431459557405 0.07763552068767754 NT(ph)GSPDRKPSKK ddPTM_A549_MK2206_60min_R1 1 NTGSPDRKPSKK 12 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NT(0.5)GS(0.5)PDRKPSKK 57.159 0.0035457 31289000.0 1541.4 1576.5 1289.7 874.79 1811.7 1084.4 1260.9 1019.6 1700.9 2096.1 1727.6 True False 1801.5506363881532 1656.737116224066 1472.598853073558 1089.1135892708148 1545.2013299444777 1199.150488233538 1489.989208646036 1164.1314223940428 1315.6488657791663 1622.5895541953266 1298.5892406656121 1.3873136939473951 1.2757976612950217 1.1339989636128163 0.8386898298283857 1.1899076948708283 0.9234255534251113 1.147390692904801 0.8964585458888826 1.013137044863247 1.2495017696000954 1.0 10.342729445880405 -5.796362176076368 2.527540227022943 1.006327132090532 1.361707392897636 0.4600680618710923 0.1224650042126397 0.11702199329976029 1.4566553283565844 0.011727742878201917 0.055390956733987855 1.5982246472757731e-06 5.796362176076368 0.35538026080710394 NT(ph)GSPDRKPSKK ddPTM_A549_PD325901_60min_R1 2 NTGSPDRKPSKK 12 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NT(0.604)GS(0.395)PDRKPSKK;NT(0.533)GS(0.464)PDRKPS(0.003)KK 55.173 0.008455599999999999 266790000.0 5284.0 4803.4 3876.2 3415.3 3635.2999999999997 3442.0 2563.6 3213.6 4108.1 5051.9 6165.5 True False 5820.427790124797 5208.199375533763 4139.26224148414 3626.2553242909275 3379.9690691041715 3413.969493191465 2661.159200855747 3149.5022269795686 3935.4508433025735 4732.922171837355 5407.182586324677 1.0764252357309443 0.963200204983985 0.765511830865997 0.6706367440711364 0.6250887620574276 0.6313767731509098 0.49215264296532046 0.5824664095762153 0.7278191147559424 0.8753028210675563 1.0 12.400661357918999 -5.61780863716815 3.24932038696339 0.773241241134561 1.060034110398714 0.35152683298983745 0.1455062253581146 0.29593334051752307 5.893709077252416 0.0269835151382505 0.13956708640574725 2.4109675373781496e-06 5.61780863716815 0.28679286926415304 NT(ph)PSPDVTLGTNPGTEDIQFPIQK ddPTM_A549_MK2206_60min_R1 1 NTPSPDVTLGTNPGTEDIQFPIQK 24 0 M0R2Z9;Q8IX01-4;Q8IX01;M0R3F6;Q8IX01-3 M0R2Z9 SUGP2 SURP and G-patch domain-containing protein 2 1 NT(0.473)PS(0.423)PDVT(0.051)LGT(0.051)NPGT(0.002)EDIQFPIQK 43.553999999999995 0.04531 1322100.0 410.19 610.19 720.19 440.79 796.59 584.17 943.18 958.5 1092.8 702.52 1017.9 True False 479.4200438173453 641.2460646677849 822.3237714158687 548.7835697878154 679.4126662363923 645.9864816593374 1114.543597280331 1094.370310283141 845.282544843008 543.8202440786704 765.1273373891678 0.626588569496501 0.8380906462653641 1.0747541372941547 0.7172447551807796 0.8879733255313313 0.844286238501982 1.456677265098736 1.4303113440142445 1.1047606111256627 0.7107578274935775 1.0 9.579556060105515 -7.593561160492504 24.9999999867281 1.1147382053774313 0.8398018858030555 0.33439253275033 0.21552883040853552 42.410562811873405 14999.661928969279 0.030009220051590506 0.04451086780443203 2.549405036847101e-08 7.593561160492504 -0.2749363195743758 NT(ph)PSPDVTLGTNPGTEDIQFPIQK ddPTM_A549_PD325901_60min_R1 1 NTPSPDVTLGTNPGTEDIQFPIQK 24 0 M0R2Z9;Q8IX01-4;Q8IX01;M0R3F6;Q8IX01-3 M0R2Z9 SUGP2 SURP and G-patch domain-containing protein 2 1 NT(0.417)PS(0.401)PDVT(0.09)LGT(0.09)NPGT(0.001)EDIQFPIQK 67.86399999999999 0.00019009 1986600.0 782.63 1064.6 1299.8 1215.7 1168.8 959.62 701.54 1090.6 929.85 925.34 975.14 True False 862.0820214582457 1154.317578214025 1388.0122443323569 1290.791027944978 1086.7075201411037 951.8051728809965 728.2374885974181 1068.8471274408512 890.7716381404784 866.9138744804875 855.2039619217654 1.0080425955008725 1.349757051662984 1.6230189593758373 1.509337053402309 1.270699819606912 1.1129569263712884 0.8515366170205344 1.2498154534258694 1.0415897000041807 1.0136925377805877 1.0 9.740124726452917 -7.214452457310037 2.8915556815456185 1.0288172784142813 1.3874313409169485 0.4663033508818406 0.1659455916355086 0.1696963348079633 2.8202179813604222 0.024645816228000657 0.04397034618481576 6.103058638355221e-08 7.214452457310037 0.35861406250266725 NT(ph)RT(ph)PRTPRT(ph)PQLK ddPTM_A549_MK2206_60min_R1 1 NTRTPRTPRTPQLK 14 3 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 3 NT(0.882)RT(0.907)PRT(0.315)PRT(0.895)PQLK 53.778999999999996 0.0032626999999999995 6678500.0 480.33 487.54 690.63 533.4 697.01 658.11 561.23 528.37 1034.5 872.18 721.41 True False 561.3979610589865 512.353703548291 788.5717189254806 664.0830239452358 594.4807523235637 727.7507633819373 663.1982263212107 603.2680655652616 800.1874017570382 675.1539322446828 542.2639870968852 1.0352853488658518 0.9448418403945196 1.454221076246002 1.2246489528108482 1.096293994196869 1.3420599204422394 1.223017279594336 1.112498856497872 1.4756417921850125 1.2450650390029578 1.0 9.082851550867408 -5.729038537631815 24.999280743957197 1.2319715846961372 0.9900632576706394 0.3264236257836679 0.1387534865851465 228.4391233596643 176252.00788299248 0.024511948077414678 0.0949195099411941 1.8662140827847623e-06 5.729038537631815 -0.2419083270254978 NT(ph)RTIQR ddPTM_A549_PD325901_60min_R1 1 NTRTIQR 7 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 NT(0.947)RT(0.053)IQR 56.729 0.014611 802900000.0 719.95 671.1 928.64 1048.5 974.11 1087.9 839.85 943.04 1204.3 1052.7 929.17 True False 793.0387940008223 727.6559522256547 991.6630947659637 1113.263463683728 905.6918740970654 1079.040503092096 871.810951333554 924.2303273994316 1153.6874590660616 986.2323423450937 814.8879804939253 0.9731874969123246 0.8929521230446951 1.216931797380163 1.3661552143755384 1.1114311362748306 1.3241580792958327 1.069853737203396 1.1341808316269815 1.4157620270295077 1.2102673814716374 1.0 9.670457941028454 -5.7647767616168295 24.999400127529512 1.2026271422745909 0.9330697602792044 0.42801077104713403 0.12139631060909277 71.41258786681773 534952.5763470259 0.021815559404369442 0.07210533515208495 1.7187916626511038e-06 5.7647767616168295 -0.2695573819953865 NT(ph)RTPRT(ph)PR ddPTM_A549_MK2206_60min_R1 1 NTRTPRTPR 9 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 NT(0.504)RT(0.504)PRT(0.991)PR 50.145 0.013854 17799000.0 548.35 842.43 684.82 819.49 909.28 832.6 927.29 675.0 969.76 1071.1 1154.5 True False 640.8980741296505 885.3060886905422 781.9377735611655 1020.2650867883042 775.5261165159328 920.70517936485 1095.7665899638216 770.6833171008033 750.1109083885028 829.1377660887425 867.8057874209596 0.7385270799291874 1.020166149527064 0.9010515773177935 1.1756836628394007 0.893663222529002 1.0609576390370736 1.262686428054762 0.8880827119063177 0.8643764760059559 0.9554416185133601 1.0 9.761228397334861 -4.215679139496407 19.526900947474974 0.9644635789806695 0.9834698072605892 0.0 0.1424593861056091 0.0 0.0 0.018177275060749426 0.0 6.0858446266775574e-05 4.215679139496407 0.019006228279919712 NT(ph)SASDEDER ddPTM_A549_PD325901_60min_R1 1 NTSASDEDER 10 0 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NT(0.964)S(0.018)AS(0.018)DEDER 48.74100000000001 0.032386 1211200.0 0.0 0.0 0.0 174.92 243.66 202.14 0.0 0.0 142.88 212.52 0.0 True False 0.0 0.0 0.0 185.72441112785677 226.5461621813666 200.49383885930334 0.0 0.0 136.87525047858418 199.10145093110992 0.0 0.0 NTAPS(ph)PGPSVIR ddPTM_A549_PD325901_60min_R1 2 NTAPSPGPSVIR 12 0 Q9H7P9;E7ESZ3;Q9H7P9-2;M0QX05 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 NTAPS(0.968)PGPS(0.032)VIR;NTAPS(0.999)PGPS(0.001)VIR 169.54 1.2710000000000001e-15 92918000.0 21751.9 23585.0 25284.0 29284.0 29157.0 29184.0 29125.0 31108.0 29537.0 28416.0 31732.0 True False 23960.13687509756 25572.590721564695 26999.924285043315 31092.806171210577 27109.112906189384 28946.335179924354 30233.36781281152 30487.52653624609 28295.66260768435 26621.80891049509 27829.165165721286 0.8609721755006355 0.9189133259758673 0.9702024521490357 1.117274125402414 0.9741259841880262 1.0401438565458352 1.0863914757332218 1.0955242945555281 1.0167628974561433 0.9566154339148712 1.0 14.764310010125582 -5.766381610723588 2.5002726994167483 1.025958358891852 0.874117786258676 0.5661044034285054 0.04923451809270249 0.15729310392486842 1.9019389894683667 0.006526089255288705 0.03245103912150604 1.712451929845652e-06 5.766381610723588 -0.15184057263317596 NTAS(ph)LNSR ddPTM_A549_MK2206_60min_R1 1 NTASLNSR 8 0 C9JXI9;C9JSG7;C9JJM9;C9JD81;C9J3W7;C9JBN7;C9JEW7;C9J718;C9JF32;A0A0C4DG23;A0A3B3ITR4;O00522-3;O00522 C9JXI9 KRIT1 Krev interaction trapped protein 1 1 NT(0.004)AS(0.996)LNS(0.001)R 83.081 0.0034165 13377000.0 854.51 1255.8 1182.5 1296.2 1570.2 1329.2 1237.8 1273.7 1418.9 1898.9 1712.7 True False 998.7303972363047 1319.7148560445169 1350.1962811192398 1613.7690581886284 1339.2256600313617 1469.855061748448 1462.6922376572797 1454.2508755426563 1097.521415517701 1469.9371711566741 1287.3893218846924 0.7757796186892391 1.025109369489333 1.048786298104912 1.2535206178548441 1.040264694809479 1.1417331468903533 1.1361693100855847 1.1296123486667455 0.8525171033040482 1.1417969266707433 1.0 10.330232692389718 -8.755480136139987 24.998841057616296 0.9303552976530393 1.0766169912617638 0.0 0.13237651640286538 155.29279500966854 651447.7811966166 0.020638913040630764 0.023106019088240882 1.7559812078311984e-09 8.755480136139987 0.14626169360872454 NTAS(ph)LNSR ddPTM_A549_PD325901_60min_R1 1 NTASLNSR 8 0 C9JXI9;C9JSG7;C9JJM9;C9JD81;C9J3W7;C9JBN7;C9JEW7;C9J718;C9JF32;A0A0C4DG23;A0A3B3ITR4;O00522-3;O00522 C9JXI9 KRIT1 Krev interaction trapped protein 1 1 NT(0.002)AS(0.998)LNSR 95.48299999999999 0.0025088000000000003 11264000.0 2046.3 1769.6 2186.2 2226.8 2601.1 2182.5 2234.8 2852.3 2411.8 2522.9 2801.5 True False 2254.0388695935594 1918.7304024117395 2334.5686786885676 2364.3443785702702 2418.407709307857 2164.726443605569 2319.846536929483 2795.4086389139384 2310.440433260422 2363.6036634391926 2456.9332601716933 0.9174196573154146 0.7809452676291486 0.9501962127068219 0.9623152638688472 0.9843196591912537 0.881068476175985 0.9442041322552529 1.1377633589927436 0.9403757402425192 0.9620137843198969 1.0 11.262642953706465 -5.906915123465796 6.661868082458054 0.9744287747750111 0.8501161946136648 0.35064558925646117 0.06597640041490616 0.1646497458256749 9.89520156975735 0.008792741861189005 0.02782534350400177 1.2390387149487707e-06 5.906915123465796 -0.12431258016134628 NTDDDRPPRR ddPTM_A549_MK2206_60min_R1 2 NTDDDRPPRR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 61.353 0.0025191999999999997 68445000.0 248.03 495.73 427.28 597.48 862.0899999999999 462.66999999999996 507.77 561.99 717.72 680.67 685.72 False True 289.8914002487046 520.9605395659727 487.8747289612079 743.8626268218962 735.2777030037176 511.62943230451 600.0252363186598 641.6538035221934 555.1575659633266 526.9061742541544 515.4367990907754 0.5624189052083005 1.0107166203207476 0.9465267707346727 1.4431694208369705 1.4265137923810234 0.992613319823145 1.1641102020210772 1.244873871353507 1.0770623419643655 1.022251758476715 1.0 9.009651730407603 -5.132690185765759 1.8025616646193203 1.105485377256149 0.2509940144650457 0.504617656458501 0.1635696842107063 0.9211682006656848 2.2770803576320056 0.024781860760997552 1.4792932041175308 7.3673247560289145e-06 5.132690185765759 -0.8544913627911033 NTDDDRPPRR ddPTM_A549_PD325901_60min_R1 3 NTDDDRPPRR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;; 66.056 0.0017524 47842500.0 1344.95 1384.3 1325.97 1269.79 1509.92 1516.71 1705.72 1314.67 1574.58 1601.48 1679.27 False True 1481.48833390014 1500.9598192012734 1415.9582979053516 1348.2220443976746 1403.8684281412172 1504.3584166235973 1770.6321080057983 1288.4478755113373 1508.405878349447 1500.362279489714 1472.7304357695953 1.0059467081808275 1.019168058692918 0.961451100292786 0.9154574466936598 0.9532419470964534 1.021475743344351 1.2022784788042562 0.874870135238321 1.0242240139222825 1.0187623227231528 1.0 10.524277672559478 -7.271694368095388 22.70406251495382 1.016855293305758 0.9701040217107575 0.10482448187656701 0.07504081174578048 408.15817461807694 903643.1980490902 0.010860587911477022 0.017504993561142143 5.349406879767154e-08 7.271694368095388 -0.046751271595000476 NTDEMVELR ddPTM_A549_MK2206_60min_R1 1 NTDEMVELR 9 0 P61978-3;P61978;P61978-2;Q5T6W2;S4R457 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 87.149 0.0031999000000000003 1774600.0 725.27 694.76 677.93 518.98 1096.2 847.48 1088.1 791.78 1163.5 858.98 1066.2 False True 847.6778448509376 730.1203164401093 774.070667957011 646.1301232978976 934.9504321273596 937.1597710883049 1285.7936854054665 904.0172397245541 899.9691077277088 664.9358214124807 801.4331143769832 1.0577025451586237 0.9110184035852936 0.9658581035283984 0.806218400147073 1.1665982043357042 1.1693549396406369 1.6043680531032396 1.1280008568491926 1.122949740387662 0.8296834875975737 1.0 9.646438311423218 -6.778452994371565 24.99940138190389 1.12153434297191 0.9356620365701174 0.22696699251148433 0.18355232351144857 303.2626746813672 445606.51162058924 0.026019731057070075 0.0492596834774931 1.6655090835050544e-07 6.778452994371565 -0.18587230640179264 NTDLEREDS(ph)ISR ddPTM_A549_MK2206_60min_R1 2 NTDLEREDSISR 12 1 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 NTDLEREDS(0.999)IS(0.001)R;NTDLEREDS(1)ISR 114.69 7.8133e-06 15278900.0 931.8599999999999 1416.67 1148.83 1025.27 1708.04 1094.76 908.22 1102.45 1482.47 1221.29 1364.3 True False 1089.13518621037 1488.7724519131914 1311.7513688272443 1276.4611960261193 1456.789578626906 1210.6067765571256 1073.2318178099008 1258.725663611527 1146.692912018132 945.3997407772579 1025.5066572355256 1.0620459443397168 1.4517433323412046 1.2791251617647739 1.244712734939328 1.420555945052562 1.1804962630087428 1.046538128482782 1.2274183251083843 1.1181720800421617 0.9218855227383768 1.0 10.002121141988876 -8.541163468413998 0.44033322559482013 1.0111871427721049 1.304606338319699 0.47305740738454605 0.11632603690765378 0.5743502027938763 0.274669508671703 0.04694853736985493 0.05314486039454109 2.876315565969321e-09 8.541163468413998 0.2934191955475942 NTDLEREDS(ph)ISR ddPTM_A549_PD325901_60min_R1 2 NTDLEREDSISR 12 1 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 NTDLEREDS(1)ISR;NTDLEREDS(1)ISR 156.17 2.5078e-14 15969100.0 1361.7800000000002 1249.5900000000001 1739.65 1427.9 1827.37 1733.5700000000002 1638.54 1768.6799999999998 1757.77 1519.41 1513.53 True False 1500.0269031105497 1354.897334736487 1857.7131103652762 1516.0981400038104 1699.021835284264 1719.452380683301 1700.8955363434911 1733.4022898973817 1683.8970397098326 1423.4741932958673 1327.3754050571715 1.1300698335946204 1.0207340964541451 1.399538595703649 1.1421773631089016 1.2799859247136534 1.2953776106837254 1.2813975080924689 1.3058870032496361 1.2685914122669053 1.0723975959420136 1.0 10.374360732552407 -10.687189354459644 0.9401734254932993 0.9994374179297205 1.2383680193943307 0.3630153149928853 0.10052415368569054 0.42233236351827685 0.6617188730739156 0.06780270283994519 0.017691939388531537 2.0549944132904928e-11 10.687189354459644 0.2389306014646102 NTDSWAPPLEIVNHRS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 NTDSWAPPLEIVNHRSPSR 19 1 Q9NRR4;H0YB67 Q9NRR4 DROSHA Ribonuclease 3 1 NTDSWAPPLEIVNHRS(0.802)PS(0.197)R 54.728 0.0042379 5349500.0 624.87 591.09 660.22 673.19 1132.0 602.12 582.1 659.85 639.4 918.86 735.88 True False 688.3063423950191 640.9032287305358 705.0264994253804 714.7714173745819 1052.4922251879957 597.2165343522498 604.2521340373424 646.6887741076893 612.5282415733949 860.8430227863712 645.3714251276623 1.0665274531776237 0.9930765506138692 1.0924352581707775 1.1075349628831048 1.6308317725405954 0.9253842223245523 0.9362858510784143 1.002041226073445 0.9491096409361932 1.3338722311978501 1.0 9.333985891337958 NTDVAQS(ph)PEAPK ddPTM_A549_MK2206_60min_R1 2 NTDVAQSPEAPK 12 0 Q9P2E9;A0A087WVV2;V9GY78;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NTDVAQS(1)PEAPK;NTDVAQS(1)PEAPK 184.17 3.3122e-19 43660000.0 8093.200000000001 10396.0 10469.6 9825.1 17301.0 14315.400000000001 12172.9 14318.1 18086.4 14703.3 14472.400000000001 True False 9459.134300257292 10925.1119950938 11954.346710195337 12232.249941065507 14756.04581849611 15830.246126206555 14384.558361430194 16347.734522342234 13989.859278045915 11381.814318114655 10878.503662079775 0.8695253128635594 1.0042844433813531 1.09889623440269 1.124442324150206 1.356440763993365 1.4551859904581856 1.322291999732629 1.5027558044887253 1.2860095204831972 1.0462665336768069 1.0 13.40919250711575 -5.744038229101805 1.4249755761247747 1.2158013022881358 0.8642947365176231 0.3967621236422867 0.15339363188902308 0.6367478673225815 1.9903764057013733 0.027734467650591548 0.24696002607226353 1.8028590358379221e-06 5.744038229101805 -0.35150656577051265 NTDVAQS(ph)PEAPK ddPTM_A549_PD325901_60min_R1 2 NTDVAQSPEAPK 12 0 Q9P2E9;A0A087WVV2;V9GY78;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NTDVAQS(1)PEAPK;NTDVAQS(1)PEAPK 148.18 5.1959e-12 41013000.0 20822.5 20867.9 22938.0 21852.0 27256.0 22412.0 24233.0 23449.0 25504.0 25849.0 27111.0 True False 22936.384871285678 22626.511168901423 24494.71061739931 23201.74841050722 25341.632588095417 22229.48410267491 25155.200075806424 22981.29129961536 24432.155572549073 24216.88972858207 23776.518870788786 0.9646653909233418 0.9516326293122652 1.0302059250352613 0.9758261306709741 1.0658260246511313 0.934934345245362 1.0579849898342961 0.9665540790266643 1.027574966096731 1.0185212503220693 1.0 14.537249884562225 -5.751907270328558 24.982181817301473 1.0098578242203502 0.9581489858093737 0.2158573015807097 0.03702660562986667 190.99604482115384 500559.76195819303 0.00432706602892821 0.016333559670331718 1.770486948722092e-06 5.751907270328558 -0.05170883841097651 NTDVAQS(ph)PEAPKQEAPAK ddPTM_A549_MK2206_60min_R1 2 NTDVAQSPEAPKQEAPAK 18 1 Q9P2E9;A0A087WVV2;V9GY78;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NTDVAQS(1)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK 174.99 4.5777999999999995e-31 189665000.0 6350.6 7983.3 9373.8 8689.0 11380.9 8638.9 8881.1 8108.0 12370.5 11812.7 12130.4 True False 7422.42602273686 8389.615870568712 10703.145792774223 10817.805390064032 9706.784686187068 9553.062663962286 10494.68091117956 9257.333829708605 9568.601501629242 9144.202865723553 9118.086897991509 0.8140332622155465 0.9201070317082347 1.173836783144923 1.1864117452584193 1.0645637396069603 1.0477047181976948 1.150973995816083 1.0152715074198042 1.0494088956025382 1.0028641937748803 1.0 13.154515443229101 -5.553173664728363 6.621137055682856 1.0545327823424269 0.8386164017639534 0.5968405321360901 0.0667097164994417 0.08545534590591292 12.110559621720823 0.010015754922419266 0.04109086335483107 2.7978622928527622e-06 5.553173664728363 -0.2159163805784735 NTDVAQS(ph)PEAPKQEAPAK ddPTM_A549_PD325901_60min_R1 2 NTDVAQSPEAPKQEAPAK 18 1 Q9P2E9;A0A087WVV2;V9GY78;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NTDVAQS(1)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK 186.82 2.2608999999999996e-40 317410000.0 38951.0 38572.0 46565.0 48010.0 51140.0 50810.0 51293.0 52983.0 53864.0 46558.0 52910.0 True False 42905.27684578931 41822.59780844576 49725.180918092185 50975.46866137891 47548.10282342235 50396.2202060018 53244.98318360659 51926.2125006406 51600.28339710568 43618.31993436201 46402.40542412435 0.9246347566172313 0.9013023662497984 1.071607828594169 1.0985522883017838 1.0246904743154188 1.0860691325239162 1.147461703697042 1.1190413950748435 1.1120174250768255 0.9400012679447236 1.0 15.501911973770977 -5.763447017959763 24.90012618434855 1.068906625250564 0.9129685200948482 0.5220688243577742 0.05666138433756388 24.9796274338362 309837.3784034345 0.007449069856263079 0.02498324751730459 1.7240624063222487e-06 5.763447017959763 -0.1559381051557157 NTDVAQS(ph)PEAPKQEAPAKK ddPTM_A549_MK2206_60min_R1 4 NTDVAQSPEAPKQEAPAKK 19 2 Q9P2E9;A0A087WVV2;V9GY78;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NTDVAQS(1)PEAPKQEAPAKK;NT(0.024)DVAQS(0.976)PEAPKQEAPAKK;NTDVAQS(1)PEAPKQEAPAKK;NT(0.009)DVAQS(0.991)PEAPKQEAPAKK 124.0 3.5853e-15 47713400.0 3422.2700000000004 3860.23 4936.16 3989.1100000000006 5975.66 4890.68 4584.66 3977.61 6696.43 6851.999999999999 5925.35 True False 3999.865509531649 4056.699218624565 5636.181712481647 4966.4421290779555 5096.648329908933 5408.208511429361 5417.633377199725 4541.4483984197395 5179.699297001342 5304.128441079328 4453.922063659402 0.8980546701002007 0.9108150436048553 1.26544237459128 1.1150716285766034 1.1443056831850935 1.2142575541579874 1.216373636486249 1.0196515191575726 1.1629523873495065 1.1908893701479333 1.0 12.120860598208575 -5.6662900911488725 10.232516375603742 1.1094294605480077 0.9021071108538365 0.518889009430997 0.0839882766757576 0.24349569907641896 24.240817580260465 0.012789805313048679 0.04963350521820652 2.1563036044105352e-06 5.6662900911488725 -0.20732234969417118 NTDVAQS(ph)PEAPKQEAPAKK ddPTM_A549_PD325901_60min_R1 4 NTDVAQSPEAPKQEAPAKK 19 2 Q9P2E9;A0A087WVV2;V9GY78;Q9P2E9-3 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NT(0.01)DVAQS(0.99)PEAPKQEAPAKK;NTDVAQS(1)PEAPKQEAPAKK;NTDVAQS(1)PEAPKQEAPAKK;NT(0.003)DVAQS(0.997)PEAPKQEAPAKK 124.14 3.4211999999999997e-15 79633100.0 6537.3 6626.4 7934.5 7032.8 8901.6 8647.300000000001 8833.1 9188.9 8279.8 7465.700000000001 8329.7 True False 7200.961883494095 7184.829983352821 8472.982884024534 7467.200083352341 8276.382324852879 8576.87925580318 9169.248454157787 9005.620180947399 7931.828799780102 6994.314427895669 7305.1997063188155 0.9857310098265271 0.983522733422075 1.159856434410084 1.0221760367335884 1.132944020365934 1.1740786837606088 1.2551673907321952 1.2327685132492356 1.0857785027997615 0.9574432882164414 1.0 12.834707997988954 -3.701766798309273 15.415865595917701 1.0785851892839964 0.4744450852241945 0.0 0.1024145648921933 0.0 0.0 0.014039537684073526 0.0 0.00019871616706438626 3.701766798309273 -0.6041401040598019 NTEASS(ph)EEESSASR ddPTM_A549_PD325901_60min_R1 1 NTEASSEEESSASR 14 0 C9J879;Q9H3R0-3;Q9H3R0-4;Q9H3R0-2;Q9H3R0 C9J879 KDM4C Lysine-specific demethylase 4C 1 NTEAS(0.206)S(0.794)EEESSASR 65.472 0.0046658 2090800.0 514.92 470.91 317.67 395.13 342.87 522.78 588.48 399.58 547.69 332.58 545.54 True False 567.1942993359312 510.59523835878866 339.22899650489313 419.5362826946606 318.78799403728635 518.5226530071565 610.8749284286118 391.61006343555425 524.6724939432797 311.5808420415421 478.44203846299 1.1855026392707058 1.067203960586515 0.7090284072751568 0.8768800585384052 0.6663043136038019 1.0837731873915735 1.2768002794885387 0.8185109834696253 1.0966270765604262 0.6512405202571774 1.0 8.902200347742069 NTEES(ph)SSPVRK ddPTM_A549_MK2206_60min_R1 1 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.417)S(0.292)S(0.292)PVRK 102.87 0.00017886 20887000.0 1521.4 1317.8 1625.9 1622.1 2528.2 2173.2 1411.7 1845.4 2920.2 2195.0 2245.6 True False 1778.1751253412062 1384.8703912211056 1856.4770684750704 2019.514572818836 2156.3051290862895 2403.166581546592 1668.1876166592187 2106.9911013004776 2258.779362601163 1699.1479755062921 1687.9555445929022 1.0534490265678549 0.8204424551685132 1.0998376553351776 1.1964263983657808 1.277465592025614 1.4237143799460565 0.9882888337924497 1.2482503511718002 1.3381746751783863 1.006630761662677 1.0 10.721061193185907 -5.955185626592622 5.623762316432674 1.1851420989852874 0.938057632181624 0.3058712200278363 0.1430966147170279 0.18225042841789782 13.6632750963419 0.021676260612457216 0.06870893413259643 1.1087008319283551e-06 5.955185626592622 -0.24708446680366347 NTEES(ph)SSPVRK ddPTM_A549_PD325901_60min_R1 1 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NT(0.012)EES(0.329)S(0.329)S(0.329)PVRK 40.025 0.043733999999999995 595590000.0 2272.4 2370.9 2322.9 2431.3 2676.5 2108.5 2290.0 2465.7 2486.9 2576.0 2822.4 True False 2503.092375147536 2570.7040636742745 2480.545962732446 2581.4758791170725 2488.511873423738 2091.3290750709457 2377.147203136084 2416.519679195769 2382.384241427709 2413.350920377091 2475.2626926677094 1.0112431228258174 1.0385580776090086 1.0021344280267248 1.0429098643808556 1.0053526362253493 0.8448917689689817 0.9603615851269985 0.9762679679833779 0.9624773356318392 0.9749877972653104 1.0 11.273365927146433 -7.012186655133841 24.94790143606457 0.9691206009151853 1.023343228636671 0.3805819029405636 0.040230328679782094 612.4660466131076 1253812.4412861697 0.006279116335887284 0.011261321336199576 9.723292372301629e-08 7.012186655133841 0.05422262772148578 NTEESS(ph)SPVR ddPTM_A549_MK2206_60min_R1 1 NTEESSSPVR 10 0 Q5T200;Q5T200-2;Q5T9K0 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NT(0.001)EES(0.072)S(0.464)S(0.464)PVR 56.086999999999996 0.01589 18123000.0 319.29 681.81 459.98 429.01 455.14 453.44 308.77 367.79 525.96 676.74 561.62 True False 373.17834610897455 716.5112167540312 525.2120806674233 534.1174692589908 388.1895089203122 501.42271983088835 364.8695122163823 419.92535880963607 406.8308997855313 523.8639639836579 422.15425407653476 0.8839857528507078 1.6972734725163539 1.2441236244707001 1.2652187301236046 0.9195442309813491 1.1877713300029487 0.8643037673860158 0.9947201875964168 0.9637020019506296 1.2409302024673747 1.0 8.721626442091637 -6.694547295643491 5.614583178735444 0.9864640326727789 1.3060375050098838 0.2366396295983041 0.20480652298700705 0.1462561139406756 8.597232801347786 0.02383818898238225 0.049888872772479255 2.0204713861435179e-07 6.694547295643491 0.31957347233710487 NTEESS(ph)SPVRK ddPTM_A549_MK2206_60min_R1 2 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.07)S(0.547)S(0.383)PVRK;NTEES(0.056)S(0.585)S(0.358)PVRK 89.62899999999999 0.00012604 1301860000.0 2792.0 3761.2 3898.0 2766.5 4994.6 4076.4 3478.9 3266.4 4938.3 5660.0 4652.6 True False 3263.221342153707 3952.629014615892 4450.7950137867165 3444.2926241929054 4259.900956306615 4507.761942304676 4110.971098389005 3729.4222029304638 3819.782934844642 4381.402068959277 3497.231014772415 0.9330871562015081 1.13021673373016 1.2726625707556682 0.9848627699011314 1.218078227692897 1.2889517230242287 1.1754931490153588 1.0663928654347583 1.0922306586867603 1.2528203171171979 1.0 11.771997383202295 -9.525255669541776 0.7689991598163016 1.0139961721030337 1.1434705093993698 0.0 0.12645354066243594 0.6719610923906961 0.8549572390476885 0.03665299829804369 0.02325549953092566 2.983625638774739e-10 9.525255669541776 0.12947433729633606 NTEESS(ph)SPVRK ddPTM_A549_PD325901_60min_R1 2 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.209)S(0.395)S(0.395)PVRK;NTEES(0.026)S(0.487)S(0.487)PVRK 147.73 1.2825e-11 99568000.0 8771.0 8563.8 9724.7 9333.400000000001 9494.4 9791.6 10435.8 9802.0 10217.5 9525.5 10019.3 True False 9661.425463131063 9285.501480658713 10384.676621371651 9909.902920310647 8827.546097901859 9711.860455994633 10832.940079688871 9606.491420479755 9788.094007313362 8924.058304367998 8786.989617575678 1.0995148376875676 1.0567329523282825 1.181824159732736 1.1277927198740425 1.0046155147657236 1.1052545728026164 1.232838611533226 1.0932630899284226 1.1139303030170062 1.015599049590107 1.0 13.10115327395947 -10.545289434137786 0.7918852313493175 0.9980055430785112 1.1133712136649845 0.337130094785668 0.056538760933311234 0.6046517885166011 0.6628032051182705 0.041779319624973395 0.01097825144358571 2.8491188487003427e-11 10.545289434137786 0.11536567058647329 NTEESSS(ph)PVR ddPTM_A549_MK2206_60min_R1 1 NTEESSSPVR 10 0 Q5T200;Q5T200-2;Q5T9K0 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.017)S(0.167)S(0.816)PVR 99.75200000000001 0.00046699 18585000.0 513.05 572.4 566.95 501.92 681.14 655.95 831.65 779.03 865.86 803.48 706.76 True False 599.6402971317904 601.5327150819251 647.3520351632583 624.8904225320452 580.9452083007019 725.3621936156297 982.7500399480347 889.4598881793169 669.744092494296 621.9733099589048 531.2519864163161 1.1287304564766028 1.132292641651477 1.2185404510769402 1.1762599265696663 1.0935398326123973 1.3653825532187263 1.849875511200257 1.6742711762442068 1.260690048449909 1.1707689116695272 1.0 9.053252520336164 -10.034448908837813 1.1696700584071542 1.0379283289951862 1.322401670214392 0.1259542515626162 0.23111075316431035 0.5451690624637718 1.4982223447191862 0.08393561052049363 0.04714237226454678 9.237428527520762e-11 10.034448908837813 0.28447334121920576 NTEESSS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 NTEESSSPVR 10 0 Q5T200;Q5T200-2;Q5T9K0 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NT(0.001)EES(0.029)S(0.195)S(0.775)PVR;NTEES(0.032)S(0.291)S(0.677)PVR 107.09 0.00027547 41980000.0 1423.66 1455.48 1551.77 1709.77 1993.77 1699.54 1428.9 1760.29 1367.02 1489.17 1695.19 True False 1568.1889151569005 1578.1384076075046 1657.0824437510557 1815.378609730594 1853.7344733331015 1685.6995097206914 1483.2775714240815 1725.1796350292088 1309.5689033401043 1395.1435520566583 1486.692376694791 1.0548173514169032 1.0615097193919942 1.114610170689834 1.2210855710221216 1.246885033105717 1.133858985319029 0.9977030855042782 1.1604146641718995 0.8808607105738533 0.9384211380422468 1.0 10.537890443464999 -8.756143385474509 24.99890868535927 0.9437397774721391 1.124943554162469 0.5609384362526817 0.07251110414603562 77.87607521616295 367601.36550714704 0.014111815510545345 0.01577149055764295 1.75330154104696e-09 8.756143385474509 0.18120377669032994 NTEESSS(ph)PVRK ddPTM_A549_PD325901_60min_R1 1 NTEESSSPVRK 11 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.001)S(0.011)S(0.988)PVRK 134.21 2.4583e-08 855630000.0 5328.7 4496.5 5211.1 5659.3 5635.4 5412.5 5002.1 5523.0 6154.3 5900.2 6345.4 True False 5869.665701218391 4875.435835468123 5564.756582889944 6008.862107797163 5239.588945074587 5368.422394508656 5192.457652754147 5412.839432290315 5895.656173154753 5527.66036506557 5564.956026804733 1.0547550911356645 0.876096021600998 0.9999641607384088 1.0797681201530196 0.9415328566545811 0.9646837043546377 0.9330635548140233 0.9726652656765449 1.0594254734012518 0.993298121034646 1.0 12.442154572380016 -8.740100377764415 24.788036146060072 1.0280620287864795 0.9754231454045472 0.08358037091529669 0.05534607910618241 291.0695242126427 338114.75316759513 0.009209472627624468 0.01043802910401789 1.819280322764687e-09 8.740100377764415 -0.05263888338193223 NTEKESAWS(ph)PPPIEIR ddPTM_A549_MK2206_60min_R1 2 NTEKESAWSPPPIEIR 16 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NTEKESAWS(0.999)PPPIEIR;NTEKES(0.001)AWS(0.999)PPPIEIR 65.95100000000001 0.00074034 1311900.0 800.7 1133.8 1093.7 958.15 1336.5 1070.0 944.82 1082.7 1838.6 1890.6 1491.6 True False 935.8385847644953 1191.5055771486493 1248.8031058436466 1192.8967930129877 1139.9026204508448 1183.2266897914842 1116.4815640518268 1236.176040629688 1422.1600356408806 1463.5121469212747 1121.1945539342596 0.8346799237301392 1.0627108140756385 1.113814816047411 1.0639516476664337 1.0166858342746483 1.0553268258747373 0.9957964566756992 1.1025526625080007 1.2684328787100654 1.3053150693479791 1.0 10.130820926447024 -8.410463719596176 5.792882468333177 1.129543885729394 1.0289629377937612 0.3010241555848122 0.10283933183602156 0.349738348935235 15.750641777374959 0.01876156405861013 0.02267970383979168 3.886299622468004e-09 8.410463719596176 -0.10058094793563277 NTEKESAWS(ph)PPPIEIR ddPTM_A549_PD325901_60min_R1 2 NTEKESAWSPPPIEIR 16 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NT(0.004)EKES(0.092)AWS(0.904)PPPIEIR;NTEKES(0.018)AWS(0.982)PPPIEIR 108.37 1.7907e-07 15962700.0 4942.1 3827.9 3983.0 3883.7 4818.6 5481.1 4236.1 4253.3 6733.8 4721.0 6327.200000000001 True False 5443.818353818274 4150.490567016219 4253.310331724709 4123.587328477347 4480.1581592675575 5436.4637388529145 4397.307103582867 4168.464594850699 6450.801803420287 4422.9152543090995 5548.994511425434 0.9810459070754888 0.74797164756071 0.7665010882542956 0.7431233388295555 0.8073819770487911 0.9797205111050628 0.7924511539034268 0.7512107979684949 1.1625172434642028 0.7970660711958308 1.0 12.438010660665508 -8.75890807579146 24.99982505524526 1.0767442585906077 0.8181789559609537 0.17782503410733597 0.12157460119731602 32.46630505963122 320645.27778110025 0.016479565276566095 0.018267604398068522 1.7421755890241788e-09 8.75890807579146 -0.25856530262965405 NTENCDFLFS(ph)PPEVTGR ddPTM_A549_PD325901_60min_R1 2 NTENCDFLFSPPEVTGR 17 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7;F8WC55 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 NTENCDFLFS(1)PPEVTGR;NTENCDFLFS(0.999)PPEVT(0.001)GR 110.37 5.794600000000001e-09 33008000.0 4323.8 4602.6 4303.89 4529.83 4708.11 4745.33 5210.5 4331.1 5205.3 4945.8 5211.8 True False 4762.748992986677 4990.477254826108 4595.977856793039 4809.627311109643 4377.42859569775 4706.6856057891455 5408.788428795003 4244.712812817782 4986.539342918355 4633.521343944493 4570.781640322267 1.041998801905329 1.0918214098878392 1.0055124524541923 1.0522548853964804 0.9576980350759254 1.0297332001747728 1.1833399305449324 0.9286623485515061 1.0909598697361476 1.0137262526541966 1.0 12.15822518346644 -5.752615512369118 24.93719652150023 1.0376761429716421 1.0669100826485496 0.03454232179863237 0.06528397537216758 626.885607647986 1771609.1056026723 0.008628135448548808 0.03239994053362023 1.76760201361994e-06 5.752615512369118 0.02923393967690746 NTET(ph)SKSPEKDVPMVEK ddPTM_A549_PD325901_60min_R1 2 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.067)ET(0.311)S(0.311)KS(0.311)PEKDVPMVEK;NT(0.003)ET(0.505)S(0.337)KS(0.155)PEKDVPMVEK 131.59 2.0922e-12 187405000.0 19433.4 19907.9 19048.8 20767.0 23644.9 20386.9 21950.9 23522.1 20603.3 20748.2 21636.0 True False 21406.264461887058 21585.608599781135 20341.566117739814 22049.73042472103 21984.163794476703 20220.875845655166 22786.253511493378 23052.933262769537 19737.41495090575 19438.155111090025 18974.909161904263 1.1281352800815618 1.1375869267990146 1.0720244267930081 1.1620466921122372 1.1585912536864256 1.0656639076961916 1.2008623238756322 1.2149166599992312 1.0401849506891112 1.0244136056322113 1.0 14.211805358629773 -8.910449160538262 6.761767555785719 1.0175298918420326 1.1404292997221244 0.6079688275271176 0.043513480674698346 0.10430426766084512 6.5736981866913435 0.007805310724464957 0.008268322804556964 1.22899704723986e-09 8.910449160538262 0.1228994078800918 NTETS(ph)KSPEKDVPMVEK ddPTM_A549_MK2206_60min_R1 2 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.001)ET(0.103)S(0.448)KS(0.448)PEKDVPMVEK;NT(0.002)ET(0.084)S(0.592)KS(0.322)PEKDVPMVEK 108.57 3.0748e-09 181699000.0 9608.5 14702.6 15986.0 13926.3 20474.8 16989.0 17211.8 16498.8 21009.9 18877.1 17563.8 True False 11230.17989472918 15450.89954011794 18253.055179680476 17338.244125175355 17462.98404280355 18786.76470361449 20338.961266852115 18837.555425455896 16251.191195916092 14612.74999928466 13202.223723780206 0.8506279040326422 1.1703255348026982 1.38257429669235 1.3132821021617167 1.3227305042065562 1.4230000261073639 1.5405708683921955 1.4268471599617856 1.2309434786083804 1.106840052480233 1.0 13.688493330729477 -9.912978878129223 0.9863559007518394 1.031297196206498 1.3089613470484578 0.22001678200816965 0.17291725322922372 0.4516956497550244 0.8956102999275644 0.06282296014624165 0.03502080956930246 1.2218590837200296e-10 9.912978878129223 0.2776641508419597 NTETS(ph)KSPEKDVPMVEK ddPTM_A549_PD325901_60min_R1 1 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NTET(0.012)S(0.572)KS(0.416)PEKDVPMVEK 111.13 1.5969e-09 21335000.0 3822.5 3855.2 3380.2 4442.6 4229.6 3998.7 4115.7 4743.5 4489.3 4050.6 4114.4 True False 4210.5573860242275 4180.091233825578 3609.600698793841 4717.0093121233485 3932.527487327871 3966.135912964759 4272.325215697454 4648.887171296236 4300.630332961284 3794.8444247202783 3608.3548833305067 1.166891151830911 1.1584479268201466 1.000345258574507 1.3072465055791727 1.0898394460852345 1.099153503799499 1.1840091548185259 1.2883675030891972 1.191853482269407 1.0516827051162003 1.0 11.817125519941369 -10.714581802746062 1.0257229448170015 1.002134083745943 1.1645139835212985 0.28878314821984985 0.08308271351561082 0.4526123698434441 0.863415359401797 0.05144607421497989 0.014110748782625903 1.9293818878653476e-11 10.714581802746062 0.1623798997753556 NTETSKS(ph)PEKDVPMVEK ddPTM_A549_MK2206_60min_R1 12 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.014)ET(0.189)S(0.189)KS(0.608)PEKDVPMVEK;NT(0.004)ET(0.179)S(0.133)KS(0.684)PEKDVPMVEK;NT(0.031)ET(0.116)S(0.116)KS(0.737)PEKDVPMVEK;NT(0.013)ET(0.212)S(0.151)KS(0.623)PEKDVPMVEK;NT(0.002)ET(0.042)S(0.033)KS(0.923)PEKDVPMVEK;NT(0.001)ET(0.333)S(0.219)KS(0.447)PEKDVPMVEK;NT(0.002)ET(0.04)S(0.204)KS(0.754)PEKDVPMVEK;NT(0.206)ET(0.122)S(0.122)KS(0.55)PEKDVPMVEK;NTET(0.001)S(0.004)KS(0.995)PEKDVPMVEK;NT(0.001)ET(0.008)S(0.082)KS(0.909)PEKDVPMVEK;NTET(0.005)S(0.028)KS(0.966)PEKDVPMVEK;NTET(0.016)S(0.115)KS(0.869)PEKDVPMVEK 198.64 7.784199999999999e-49 1124297000.0 50033.2 69156.8 70212.1 65758.5 98956.3 78434.8 76467.6 77465.6 101595.4 86071.79999999999 86422.40000000001 True False 58477.580965703695 72676.58572742448 80169.2315514352 81869.33545201116 84399.95935661806 86734.71847519353 90360.7731073532 88446.58602845029 78584.20411451621 66628.12060053863 64961.33294310014 0.900190595179511 1.1187668484432447 1.234106935916104 1.260277949095053 1.2992337985204871 1.3351745499305683 1.3909932110922127 1.3615266501061634 1.2097073836731211 1.0256581505015983 1.0 15.98729361506932 -10.20534625125193 0.9375478178827915 1.0167058176219146 1.2419882863413567 0.29885319199533744 0.1292490349659078 0.4862628970368845 0.8438965232983677 0.06064331320241415 0.026164900691831965 6.232377467409802e-11 10.20534625125193 0.22528246871944213 NTETSKS(ph)PEKDVPMVEK ddPTM_A549_PD325901_60min_R1 17 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.037)ET(0.174)S(0.137)KS(0.651)PEKDVPMVEK;NTET(0.103)S(0.256)KS(0.641)PEKDVPMVEK;NT(0.001)ET(0.125)S(0.125)KS(0.748)PEKDVPMVEK;NTET(0.003)S(0.02)KS(0.977)PEKDVPMVEK;NT(0.003)ET(0.094)S(0.051)KS(0.852)PEKDVPMVEK;NTET(0.001)S(0.006)KS(0.993)PEKDVPMVEK;NT(0.22)ET(0.175)S(0.14)KS(0.464)PEKDVPMVEK;NT(0.006)ET(0.266)S(0.16)KS(0.568)PEKDVPMVEK;NTET(0.026)S(0.019)KS(0.954)PEKDVPMVEK;NT(0.002)ET(0.034)S(0.418)KS(0.546)PEKDVPMVEK;NTET(0.001)S(0.027)KS(0.972)PEKDVPMVEK;NT(0.202)ET(0.137)S(0.137)KS(0.524)PEKDVPMVEK;NT(0.005)ET(0.073)S(0.053)KS(0.87)PEKDVPMVEK;NT(0.045)ET(0.028)S(0.02)KS(0.907)PEKDVPMVEK;NT(0.023)ET(0.148)S(0.086)KS(0.743)PEKDVPMVEK;NTET(0.001)S(0.041)KS(0.958)PEKDVPMVEK;NTET(0.005)S(0.029)KS(0.966)PEKDVPMVEK 154.79 1.5268e-22 1705998000.0 138662.80000000002 133280.7 153542.30000000005 151582.4 178482.49999999997 167599.60000000003 169367.70000000004 171383.69999999998 171857.8 164287.4 169710.7 True False 152739.7453778422 144512.73233765742 163962.60380285594 160945.30057939177 165946.5049311981 166234.72442507016 175813.08050506198 167965.31765558795 164635.214317598 153914.26552653703 148837.3597847655 1.026219126694534 0.9709439387169866 1.101622630500589 1.0813501449645146 1.114951952729975 1.1168884254965494 1.1812429403431117 1.128515837008151 1.1061417278274612 1.0341104259650487 1.0 17.183377178376414 -5.763385187589342 24.9998296248832 1.0784536045232058 0.9985815245894002 0.32218848848766535 0.04939822685882935 58.48788694739449 751509.1678870259 0.008751668547236895 0.029354345316860087 1.7243078780246926e-06 5.763385187589342 -0.07987207993380563 NTFTAWS(ph)DEES(ph)DYEIDDRDVNK ddPTM_A549_PD325901_60min_R1 2 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 2 NTFT(0.002)AWS(0.998)DEES(1)DYEIDDRDVNK;NTFT(0.001)AWS(0.999)DEES(1)DYEIDDRDVNK 177.52 3.9773e-41 133689000.0 8612.099999999999 7569.7 8774.4 8959.2 8852.2 8825.3 7652.3 8528.099999999999 10112.7 9364.099999999999 12831.8 True False 9486.39405210706 8207.625184864455 9369.883548753523 9512.589436180504 8230.452010432133 8753.429682818885 7943.512463999234 8358.000355334972 9687.69838686155 8772.849127912701 11253.569947482118 0.8429675290932503 0.7293352441196524 0.8326143252746164 0.8452952690189532 0.7313636516093829 0.7778358088739107 0.7058660052827522 0.7426976856535199 0.8608555713495238 0.7795614341807637 1.0 13.458095116860685 -9.615674281010099 0.87817944661632 0.9786423999662086 0.776345520804489 0.06430113005305294 0.07782928625613585 0.19432352949160317 0.31620870637037063 0.01741955990620785 0.011107953333756467 2.4228454891650235e-10 9.615674281010099 -0.20229687916171957 NTFTAWS(ph)DEESDYEIDDR ddPTM_A549_MK2206_60min_R1 2 NTFTAWSDEESDYEIDDR 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NTFTAWS(1)DEESDYEIDDR;NTFT(0.121)AWS(0.878)DEES(0.001)DYEIDDR 126.0 5.3945e-11 3705800.0 1313.37 1488.44 1586.3000000000002 1351.69 2238.79 1697.52 1617.08 1661.92 2569.52 2181.65 2397.34 True False 1535.0347471863943 1564.1952383587359 1811.2611930143341 1682.8541106796706 1909.46695670718 1877.1504396774203 1910.8825041774396 1897.502249416543 1987.5278226802764 1688.8137497782704 1802.0143147819517 0.8518438142219404 0.8680259782220473 1.0051314121960797 0.9338738859481814 1.059629183322126 1.0416956315380659 1.060414719518286 1.052989553884951 1.1029478547293183 0.9371810955800433 1.0 10.815394756292399 -5.783451262185177 0.8116052825512757 1.0515691751438578 0.7973569421499113 0.5984882421128463 0.05032568807237655 0.5344061714716541 0.3928924834580767 0.007069380086017059 0.1032345161564442 1.64645072554458e-06 5.783451262185177 -0.2542122329939466 NTFTAWS(ph)DEESDYEIDDRDVNK ddPTM_A549_MK2206_60min_R1 2 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NTFTAWS(1)DEESDYEIDDRDVNK;NTFTAWS(1)DEESDYEIDDRDVNK 346.65 1.2426999999999992e-242 213520000.0 12373.8 17077.3 13507.9 12020.1 26361.0 19624.6 18585.3 18723.1 26297.2 24636.0 24877.0 True False 14462.194929635216 17946.46162695415 15423.523336770044 14965.02503960279 22483.331820205534 21701.262146244822 21962.008437980156 21377.15676208896 20340.92618799922 19070.710489554916 18699.354329728194 0.7734061120304699 0.9597369679456207 0.8248158233062496 0.8002963511853147 1.2023587244647043 1.1605353726970242 1.1744795061220377 1.1432029355208055 1.087787622466796 1.0198593038710615 1.0 14.190700835684769 -6.749488741109849 24.99931532836267 1.0788485529659906 0.8470941424559124 0.7340062334956721 0.07733972542786854 116.93952240792123 244621.9869463045 0.012677617719600628 0.02623082257337277 1.7803740636565593e-07 6.749488741109849 -0.23175441051007817 NTFTAWS(ph)DEESDYEIDDRDVNK ddPTM_A549_PD325901_60min_R1 2 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NTFTAWS(1)DEESDYEIDDRDVNK;NTFTAWS(0.985)DEES(0.015)DYEIDDRDVNK 361.38 1.4225999999999993e-268 623590000.0 35016.0 29680.0 29424.0 30196.0 28035.0 35415.0 27068.0 26206.0 40752.0 32138.0 44392.0 True False 38570.79854258323 32181.237761969067 31420.889580885734 32061.13833990831 26065.918315499515 35126.59198180582 28098.08755217795 25683.3007717907 39039.335158897404 30108.80119529461 38932.06542407347 0.9907205826982184 0.8265998069054394 0.8070696799316679 0.8235149610142041 0.6695231303957937 0.90225349205556 0.7217209579331391 0.659695304937753 1.002755305521438 0.7733676820720887 1.0 15.248671264127406 -8.790274102692532 24.80713428225209 1.0013011863557097 0.7984658686812162 0.10573773869196346 0.11400061166771772 107.44439732163892 92436.22825661954 0.01523795247830324 0.016223446163767852 1.6207868233429202e-09 8.790274102692532 -0.2028353176744936 NTFTAWSDEES(ph)DYEIDDRDVNK ddPTM_A549_MK2206_60min_R1 2 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NTFTAWSDEES(1)DYEIDDRDVNK;NTFTAWS(0.001)DEES(0.999)DYEIDDRDVNK 153.77 4.9775e-29 9867900.0 3055.9 3541.4 3066.7 2532.2 5061.2 4029.3999999999996 3579.9 3520.4 5609.200000000001 5090.7 5967.6 True False 3571.6612104181618 3721.6421334576 3501.6041736222996 3152.5891136747764 4316.7041845311005 4455.788433500754 4230.321491023828 4019.427480772843 4338.725156051796 3940.707334355303 4485.680222618722 0.7962362525104477 0.8296717440292524 0.7806183231621618 0.7028118272403974 0.96232989653708 0.9933361747528857 0.9430724619407184 0.896057516651581 0.9672390675942714 0.8785083061615868 1.0 12.1311110611973 -6.801530440216813 11.159339713713068 0.9736504906387087 0.7813527355291613 0.7300494342940141 0.04860107411373595 0.17718551877100602 48.75617138085643 0.006126755060592208 0.011604234482544346 1.5793179075883696e-07 6.801530440216813 -0.19229775510954739 NTFTAWSDEES(ph)DYEIDDRDVNK ddPTM_A549_PD325901_60min_R1 2 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NTFTAWSDEES(1)DYEIDDRDVNK;NTFTAWSDEES(1)DYEIDDRDVNK 181.64 7.885999999999999e-50 13653500.0 4788.5 4795.0 4225.2 5116.9 5423.1 5678.8 4602.5 4296.0 6395.1 6237.3 7213.4 True False 5274.624994892612 5199.0914780539615 4511.947480191625 5432.959291676937 5042.200164679346 5632.553735600141 4777.650656084639 4210.312909853196 6126.336186559309 5843.475813535725 6326.197529510085 0.8337749446310905 0.8218351472273094 0.7132163450705657 0.8588032963456451 0.7970348919961444 0.8903537566327524 0.7552168002655825 0.6655361123665787 0.9684073502260285 0.923694808180967 1.0 12.627122888003253 -8.876946421866503 8.28492034539189 0.9860520321729237 0.7949599684885287 0.5869367912779999 0.06364871717044132 0.10178792934188746 7.021310526507517 0.010449013479622845 0.01110359672738816 1.3275582261116445e-09 8.876946421866503 -0.19109206368439502 NTGESAS(ph)QLLDAETAER ddPTM_A549_PD325901_60min_R1 1 NTGESASQLLDAETAER 17 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 NTGES(0.003)AS(0.997)QLLDAETAER 76.15100000000001 0.00044836 727930.0 412.58 239.28 349.58 536.89 519.03 351.64 244.48 252.37 421.17 476.11 304.53 True False 454.46481787465683 259.4449653532332 373.304600995311 570.0524759343415 482.57512335629474 348.7763604258703 253.78382018458936 247.33628236956508 403.4696895581276 446.0483333465593 267.07474057472297 1.7016390876077827 0.9714320597856948 1.397753303783016 2.134430514498059 1.8068916675453193 1.3059129428538698 0.9502352024697932 0.9260938785798973 1.5106995468380644 1.6701254951580213 1.0 8.061099724823675 -7.470887512754175 8.077681762355935 1.1957627029450784 1.5835162626816448 0.23391195156640487 0.3400658824893279 0.396757593512881 56.96793341749312 0.05259088787204586 0.083850032227641 3.381524102120685e-08 7.470887512754175 0.38775355973656644 NTGIICTIGPASR ddPTM_A549_MK2206_60min_R1 2 NTGIICTIGPASR 13 0 P14618;P14618-2;H3BTN5;B4DNK4;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 96.756 0.00045828 6678200.0 3447.1 4010.5 4395.9 4219.6 5863.700000000001 4550.7 4200.3 4027.8 6573.5 5861.0 5975.7 False True 4028.8862064964337 4214.617319769499 5019.304720652905 5253.402189425042 5001.157497596423 5032.2520534898185 4963.440140436157 4598.752984620171 5084.612745722469 4536.996029358718 4491.768769070095 0.8969487107704591 0.9382979259286374 1.1174450375129223 1.1695620276803838 1.113404931267596 1.1203274950708597 1.1050079368764367 1.0238178368144772 1.1319845270608415 1.010068919976481 1.0 12.133067946082194 -5.676020824536332 5.306613790366373 1.0808563007885927 0.9088514551303727 0.6106122592047676 0.05244592953675852 0.11839050425875526 5.441927408711239 0.008512104873641744 0.03445627666693443 2.108527043074721e-06 5.676020824536332 -0.17200484565822005 NTGNGTQSSMGS(ph)PLTRPTPR ddPTM_A549_PD325901_60min_R1 2 NTGNGTQSSMGSPLTRPTPR 20 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4I5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 NTGNGT(0.001)QS(0.009)S(0.149)MGS(0.839)PLT(0.002)RPTPR;NTGNGTQS(0.003)S(0.015)MGS(0.975)PLT(0.006)RPTPR 71.002 0.00018065 39839000.0 4260.0 4628.4 4956.3 5043.7 5815.299999999999 5841.6 4936.5 4981.3 6031.7 6483.4 5791.4 True False 4692.472063953752 5018.451511371214 5292.664322653069 5355.237893926202 5406.853389695894 5794.027946376305 5124.361208856451 4881.9440637457465 5778.208624801763 6074.037017536035 5079.094514709388 0.9238796502731043 0.98806027271937 1.0420487957696334 1.0543686238594467 1.0645309659108124 1.1407600172819041 1.0089123551483377 0.9611839373351527 1.137645422440495 1.1958897397843709 1.0 12.310355605364942 -5.464784713345538 1.5535259551497107 1.0598114608746767 0.9004150887826557 0.31981388830651736 0.0654226795946984 0.6772612474408942 2.013141255063462 0.008778287068001255 0.14507315312809166 3.4293774408996647e-06 5.464784713345538 -0.15939637209202095 NTGS(ph)PDR ddPTM_A549_PD325901_60min_R1 1 NTGSPDR 7 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NT(0.009)GS(0.991)PDR 49.742 0.053878999999999996 11185000.0 3307.9 3063.9 3090.4 3039.3 2947.4 2750.4 2087.0 2713.8 2432.7 3419.5 5056.4 True False 3643.715572852726 3322.105605757986 3300.133128084873 3227.0306582488865 2740.384791978001 2728.0016542922126 2166.421927050219 2659.6711300650845 2330.4620789421306 3203.5921864244806 4434.494855160507 0.8216754538822983 0.7491508535390424 0.7441959537385515 0.7277109938448861 0.6179700014284519 0.6151775440933447 0.4885386042401452 0.5997686809738824 0.5255304504931666 0.7224255052853199 1.0 12.114554057404586 -10.887420331010633 1.1389990667085172 0.9998465190739998 0.6438397547234406 0.18801262931210816 0.12416952530272864 0.27313850348387264 0.629628363666662 0.07634459767065409 0.018356567522600266 1.2959244060828442e-11 10.887420331010633 -0.3560067643505592 NTGS(ph)PDRKPSK ddPTM_A549_MK2206_60min_R1 4 NTGSPDRKPSK 11 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NT(0.247)GS(0.749)PDRKPS(0.004)K;NT(0.443)GS(0.557)PDRKPSK;NT(0.108)GS(0.892)PDRKPSK;NT(0.007)GS(0.993)PDRKPSK 79.652 0.00019401 323574000.0 7458.1 8295.4 7333.3 5467.15 7967.4 7366.8 7702.299999999999 6802.299999999999 8236.7 10746.3 10923.8 True False 8716.844946961513 8717.60042748183 8373.27221000568 6806.60199542969 6795.406014350963 8146.349886313923 9101.708209813918 7766.546856170067 6371.100601307106 8318.703366370508 8211.118978457405 1.0615903837017737 1.061682390713522 1.0197480065717837 0.8289493811120519 0.8275858664549022 0.9921120261058926 1.108461372158052 0.9458573035595134 0.7759113731054501 1.0131022809674735 1.0 13.003363124773346 -8.52990167452335 24.860466499898767 0.8924279475012986 0.981599455992991 0.023353785872100907 0.10322261082146787 286.45493291425504 1014017.3908661355 0.020132304467753912 0.022852949436387417 2.95187746427278e-09 8.52990167452335 0.08917150849169242 NTGS(ph)PDRKPSK ddPTM_A549_PD325901_60min_R1 5 NTGSPDRKPSK 11 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NTGS(1)PDRKPSK;NT(0.008)GS(0.992)PDRKPSK;NT(0.022)GS(0.973)PDRKPS(0.006)K;NT(0.023)GS(0.977)PDRKPSK;NT(0.032)GS(0.968)PDRKPSK 130.06 3.1897000000000004e-08 348155000.0 30581.100000000002 29886.2 28636.600000000002 28301.5 30181.0 24021.4 19354.600000000002 23338.999999999996 28184.399999999998 33557.1 35036.2 True False 33685.67075938407 32404.814959628005 30580.051881864878 30049.619377629988 28061.190678797604 23825.777682669795 20091.149894243514 22873.485335908706 26999.907681891153 31438.298979109466 30726.969512770822 1.0962900440078722 1.0546049764575656 0.9952186097999387 0.9779558431605397 0.9132430279899467 0.7754027833030285 0.6538604428885568 0.744410714711126 0.8787038914029378 1.0231500039742936 1.0 14.907217865826553 -6.2393977434928365 1.4661926791316962 0.8903428083805598 1.0766434184862699 0.380898238132345 0.10598202182230158 0.4866114449810115 1.9231692164520562 0.018585747087886642 0.07612182690419722 5.762384804214037e-07 6.2393977434928365 0.18630061010571008 NTGVSPASRPSPGT(ph)PTSPSNLTSGLK ddPTM_A549_MK2206_60min_R1 2 NTGVSPASRPSPGTPTSPSNLTSGLK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 NT(0.003)GVS(0.021)PAS(0.052)RPS(0.177)PGT(0.682)PT(0.044)S(0.014)PS(0.003)NLT(0.002)S(0.002)GLK;NT(0.002)GVS(0.003)PAS(0.019)RPS(0.182)PGT(0.704)PT(0.036)S(0.036)PS(0.011)NLT(0.004)S(0.004)GLK 45.685 0.008889200000000002 9955400.0 1870.63 3016.1000000000004 2241.64 2534.5 3869.5 2612.9 2358.32 2430.7 3798.6000000000004 3151.1 3209.5 True False 2186.3466114874595 3169.606607195307 2559.5382592880615 3155.4526137780285 3300.301675895654 2889.3953436973543 2786.7962174114696 2775.25916870655 2938.2231651177262 2439.2643214660056 2412.492572306251 0.9062604530207509 1.313830618000736 1.060951767756632 1.3079636596607367 1.368004906535605 1.1976805138658737 1.1551522476802483 1.15037003660223 1.2179200876498022 1.0110971322635667 1.0 11.236308785213403 -10.786602196298348 0.7349989398005509 0.9809551172629104 1.19665527719147 0.24398409208406302 0.12162294240789731 0.9229565100987449 0.7542076065972472 0.12371259995452281 0.022120211005445294 1.634548470997245e-11 10.786602196298348 0.21570015992855962 NTGVSPASRPSPGT(ph)PTSPSNLTSGLK ddPTM_A549_PD325901_60min_R1 1 NTGVSPASRPSPGTPTSPSNLTSGLK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 NTGVS(0.003)PAS(0.013)RPS(0.199)PGT(0.744)PT(0.029)S(0.008)PS(0.002)NLTSGLK 62.393 0.00018605 8427900.0 1330.8 1308.7 1615.7 1422.3 2035.7 1635.9 1574.3 1630.4 1695.6 1464.8 1751.5 True False 1465.9018363168198 1418.9887418830492 1725.3511179933755 1510.1522407223345 1892.7194547837485 1622.5777727809163 1634.210847990015 1597.880392975944 1624.3398286078334 1372.3122780156684 1536.07660367329 0.9543155808840144 0.9237747248345276 1.1232194500374946 0.9831230012299117 1.232177776979092 1.0563130568493604 1.0638862958279893 1.0402348353948363 1.057460171402569 0.8933879174606237 1.0 10.585034449278337 -5.74025747780956 24.998661252804318 1.048448024875084 0.9390450592376253 0.22096701022188647 0.08029539682706156 227.92861170386897 268994.6879372194 0.00891611978237848 0.03446362945875703 1.8186223421887441e-06 5.74025747780956 -0.10940296563745877 NTGVSPASRPSPGTPT(ph)SPSNLTSGLK ddPTM_A549_MK2206_60min_R1 1 NTGVSPASRPSPGTPTSPSNLTSGLK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 NTGVSPASRPS(0.004)PGT(0.156)PT(0.42)S(0.42)PS(0.001)NLTSGLK 186.86 1.1114999999999998e-57 54965000.0 4784.5 6575.6 5788.5 5550.8 8081.9 6468.1 7292.0 6408.6 10234.0 7568.5 7411.3 True False 5592.006630205734 6910.269953341559 6609.396341022174 6910.746249184883 6893.063216028188 7152.550048822708 8616.862010823139 7317.0386755143845 7916.015340339805 5858.770593448463 5570.869668525727 1.0037941942529056 1.2404292982087104 1.1864209242524393 1.2405147957829967 1.2373405996145599 1.2839198319847889 1.5467714241290986 1.3134463936311693 1.4209658116871178 1.051679709282972 1.0 12.443686848947536 -5.2606010622830155 6.86007075223881 1.2428131002783238 0.9998872915012664 0.19389250912405365 0.14444726107795722 0.18738758020098611 61.858566700304834 0.024217933762267704 0.2081303432861498 5.487808369735161e-06 5.2606010622830155 -0.24292580877705738 NTGVSPASRPSPGTPTS(ph)PSNLTSGLK ddPTM_A549_MK2206_60min_R1 1 NTGVSPASRPSPGTPTSPSNLTSGLK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 NTGVSPASRPS(0.001)PGT(0.017)PT(0.245)S(0.731)PS(0.006)NLTSGLK 172.36 1.37e-48 54673000.0 3555.3 4837.3 5322.9 4829.3 7102.9 5950.1 5907.5 5180.3 8232.0 6941.7 7009.1 True False 4155.347721260413 5083.4979082211685 6077.76725984744 6012.478716795519 6058.072819154734 6579.7356326432755 6980.816282081419 5914.6233890033955 6367.4651438027495 5373.565148779971 5268.547028681025 0.78870848046709 0.9648766311750693 1.1535945729934962 1.141202438559372 1.1498564568515137 1.2488710069065294 1.3249983807829953 1.1226289443380209 1.2085808685277766 1.0199330326800249 1.0 12.363189431811787 -5.483517198042007 2.424949129101393 1.136381909490634 0.7764964637995011 0.6085099396310223 0.08922051141934857 0.22959215686677195 2.199722040481296 0.014927475487562706 0.1391682341597728 3.284602370348696e-06 5.483517198042007 -0.3598854456911329 NTGVSPASRPSPGTPTS(ph)PSNLTSGLK ddPTM_A549_PD325901_60min_R1 2 NTGVSPASRPSPGTPTSPSNLTSGLK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 NTGVSPASRPSPGT(0.009)PT(0.174)S(0.704)PS(0.112)NLT(0.001)SGLK;NTGVSPASRPS(0.002)PGT(0.166)PT(0.115)S(0.711)PS(0.007)NLTSGLK 157.73 4.3363999999999996e-41 182536000.0 11389.2 11632.8 10433.7 13229.7 13761.3 13372.4 13349.4 14010.3 13962.7 14223.6 14204.099999999999 True False 12545.4231997141 12613.13688131515 11141.793624935002 14046.868522171313 12794.753761907736 13263.499608005084 13857.418722071965 13730.853575632278 13375.896275597195 13325.519468585238 12457.085747208546 1.007091341771116 1.0125270980125967 0.8944141391522266 1.1276207619682648 1.0271065015968808 1.0647353544128284 1.1124125660913278 1.1022524733531007 1.0737580640475675 1.0697140357704686 1.0 13.604678978424607 -6.264092259421053 24.997679982122207 1.0524381242283098 0.9754624868635063 0.4323509911789287 0.04764404995383952 216.21369923092195 2037350.4333702426 0.007407256687527925 0.0179278146133448 5.443869936155815e-07 6.264092259421053 -0.0769756373648035 NTHEAEVLLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 NTHEAEVLLSPK 12 0 A0A0U1RR07;Q9HCH5-7;A0A0U1RQP0;Q9HCH5-8;A0A0U1RRJ3;Q9HCH5-11 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 NTHEAEVLLS(1)PK;NTHEAEVLLS(1)PK 74.141 0.00041528 9563700.0 2570.3999999999996 2448.4 2413.8 2084.29 3414.7 2650.0 2451.8 2487.2 3980.9 3818.0 3386.6000000000004 True False 3004.2206797535396 2573.013102038059 2756.1131360385807 2594.9411435673333 2912.4021534257367 2930.4212410723667 2897.2603233867503 2839.7682167305443 3079.2325061910065 2955.511148283839 2545.6137545949073 1.180155738210808 1.0107633561429714 1.0826910135379793 1.0193774051084492 1.1440864303034055 1.1511649148590868 1.138138226255696 1.1155534540951784 1.2096228269637928 1.1610210476546392 1.0 11.313797820710912 -6.777133838644071 24.992297938810562 1.1120172379192825 1.0694583310031598 0.11377433676637227 0.06474712968967704 611.8902293901766 974390.4223597111 0.012200999916716495 0.023109933756643733 1.6705757055284402e-07 6.777133838644071 -0.04255890691612274 NTHEAEVLLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 NTHEAEVLLSPK 12 0 A0A0U1RR07;Q9HCH5-7;A0A0U1RQP0;Q9HCH5-8;A0A0U1RRJ3;Q9HCH5-11 A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 NTHEAEVLLS(1)PK;NTHEAEVLLS(1)PK 67.605 0.0014333 13000100.0 1145.56 1330.91 1325.69 1170.52 1463.9499999999998 1243.9099999999999 1664.51 1612.98 1901.29 1706.6399999999999 1724.44 True False 1261.8564078832999 1443.0704565290505 1415.6592954215753 1242.8203619562023 1361.1272023533265 1233.7800093770459 1727.8538389048203 1580.8078485416686 1821.3853932140773 1598.8824591429961 1512.3448121258173 0.8343708377652184 0.9541940733083273 0.9360691319009872 0.8217837307943288 0.9000111558157609 0.8158060248461403 1.1424999279602608 1.0452694622727052 1.2043453176884042 1.057220844296439 1.0 10.562571393817473 -7.764814260652485 24.999584924403276 1.0974271290573385 0.8817619457531379 0.72793276347967 0.06467704701249492 43.83698635944827 324725.4186650569 0.01287147753438893 0.01818116996833239 1.7186432604723563e-08 7.764814260652485 -0.2156651833042006 NTLDSEVPAAYQT(ph)PKK ddPTM_A549_MK2206_60min_R1 2 NTLDSEVPAAYQTPKK 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 NTLDSEVPAAYQT(1)PKK;NTLDSEVPAAYQT(1)PKK 93.572 4.6777e-06 18809200.0 6509.0 8769.1 8384.0 7870.8 12633.1 9153.599999999999 8632.8 9169.400000000001 13133.2 12621.1 12023.8 True False 7607.560070228675 9215.409734145547 9572.977269263174 9799.146353333637 10774.787724966372 10122.227876332077 10201.268015226826 10469.190530109781 10158.551169410863 9769.984744265363 9037.958620001846 0.8417343329490837 1.0196339816992508 1.0591968465176729 1.0842212014167902 1.192170508627995 1.1199683802413791 1.1287137332815917 1.158357873750438 1.1239873511844856 1.0809946310932952 1.0 13.141781236354031 -5.150424445705594 1.6059579860397686 1.0865234139225017 0.7012593765361254 0.6885554441388937 0.05088042122709691 0.8347125471117105 1.629995387824494 0.009658990870618799 0.5422100001052833 7.072542311335654e-06 5.150424445705594 -0.3852640373863764 NTLDSEVPAAYQT(ph)PKK ddPTM_A549_PD325901_60min_R1 2 NTLDSEVPAAYQTPKK 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 NTLDS(0.001)EVPAAYQT(0.999)PKK;NTLDSEVPAAYQT(0.999)PKK 94.259 4.2788e-06 35970000.0 17798.199999999997 15886.5 19243.0 20427.1 22387.0 21204.5 20401.1 20565.8 22914.6 19919.2 21286.2 True False 19605.06016165765 17225.3111086766 20548.945697559288 21688.835573689936 20814.614350957283 21031.817582329557 21177.475024410287 20155.59898544202 21951.579049668 18661.498312568056 18668.13234433936 1.0501886209094928 0.9227120737602732 1.100749947478824 1.1618106821632068 1.1149810793616315 1.1266160531965013 1.1344185178134234 1.0796794566090429 1.1758851204161438 0.9996446333436609 1.0 14.188289979725301 -5.783285520526253 24.623225948593433 1.0989701029943844 0.9864503695025746 0.3408569319367466 0.060530358923358854 163.92082839307443 184758.9200022389 0.00963978353787994 0.03000964549037479 1.6470791874841402e-06 5.783285520526253 -0.11251973349180977 NTLETS(ph)SLNFK ddPTM_A549_PD325901_60min_R1 1 NTLETSSLNFK 11 0 Q14151;K7EQU4;K7ERX3 Q14151 SAFB2 Scaffold attachment factor B2 1 NTLET(0.312)S(0.645)S(0.042)LNFK 98.58200000000001 0.00027579 5424500.0 3091.7 3993.1 3664.9 4039.8 4674.6 3707.5 4209.9 4251.0 3974.4 4205.5 4026.6 True False 3405.567108010754 4329.612550785669 3913.6221528340157 4289.329270948521 4346.27222249453 3677.307349217706 4370.110048245673 4166.2104701550115 3807.3697893482977 3939.964012284882 3531.3537267204506 0.9643800569289007 1.2260489562473134 1.108249825901348 1.2146416368580553 1.2307666008103046 1.041330785243313 1.2375169372523243 1.1797771598553932 1.0781615448317554 1.1157092484031346 1.0 11.786005624090343 -9.252797248233074 1.2904993344442282 1.0212811624528622 1.1547552281995233 0.11536169166070553 0.0878829038633179 0.31067636113981384 1.0740571216595949 0.01800776049410953 0.015598382329691386 5.587309792014649e-10 9.252797248233074 0.1334740657466611 NTPASAS(ph)LEGLAQTAGR ddPTM_A549_MK2206_60min_R1 2 NTPASASLEGLAQTAGR 17 0 A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3;F2Z329 A0A087WWU1 TMEM237 Transmembrane protein 237 1 NTPASAS(1)LEGLAQTAGR;NTPAS(0.001)AS(0.999)LEGLAQTAGR 171.35 7.5713e-30 11668300.0 2473.8 3233.7 2523.2 2420.5 4024.8 3000.4 3073.2 3183.4 3916.5 3696.8 3852.9 True False 2891.316961396789 3398.281517750559 2881.027701074049 3013.5226086603748 3432.757251620322 3317.9003364956725 3631.5606598548657 3634.656698753625 3029.419003365339 2861.6903124608934 2896.118595369609 0.9983420451149697 1.173391698524992 0.9947892692240962 1.040538399732136 1.1852958152710684 1.145636902370096 1.2539405898850624 1.2550096203120997 1.0460272615247366 0.9881122675833233 1.0 11.499904966312615 -8.974587459367026 20.682824224698507 1.0203054213286415 1.1323583458732227 0.27972632261681374 0.08594567026297016 26.339864443286483 21438.484156193423 0.015650998340783977 0.016262497175542852 1.0602603988388315e-09 8.974587459367026 0.11205292454458116 NTPASAS(ph)LEGLAQTAGR ddPTM_A549_PD325901_60min_R1 1 NTPASASLEGLAQTAGR 17 0 A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3;F2Z329 A0A087WWU1 TMEM237 Transmembrane protein 237 1 NTPAS(0.001)AS(0.999)LEGLAQTAGR 110.44 5.6997e-09 10162000.0 2311.5 2158.3 2787.1 2409.6 2412.2 2333.2 2840.4 2785.4 2326.7 2916.9 3038.0 True False 2546.1617783636384 2340.1875155545085 2976.249366193811 2558.435519401348 2242.7753936382364 2314.1991927699937 2948.492976326519 2729.8430118959704 2228.9168903172017 2732.7264361987304 2664.3452594687174 0.9556425802230131 0.8783349332215122 1.1170659491733022 0.9602492433399985 0.8417735598146375 0.8685808209524075 1.106648234063502 1.024583057392612 0.8365720930483529 1.0256652836140496 1.0 11.379565330978359 -6.52518544878356 24.983628424665284 0.9330535130425821 0.98406504517872 0.0 0.0967869791498036 195.12724950828522 2113397.3999082814 0.01461041486714397 0.030556406216349107 2.984108098032662e-07 6.52518544878356 0.05101153213613785 NTPS(ph)PDVTLGTNPGTEDIQFPIQK ddPTM_A549_PD325901_60min_R1 1 NTPSPDVTLGTNPGTEDIQFPIQK 24 0 M0R2Z9;Q8IX01-4;Q8IX01;M0R3F6;Q8IX01-3 M0R2Z9 SUGP2 SURP and G-patch domain-containing protein 2 1 NT(0.189)PS(0.784)PDVT(0.023)LGT(0.004)NPGTEDIQFPIQK 74.13 1.0707000000000001e-05 2072600.0 971.34 803.66 1000.4 1062.1 958.12 1249.3 895.99 1007.5 1241.4 1212.9 961.11 True False 1069.949721737285 871.387248645015 1068.2931598938987 1127.7035047958882 890.8249565345607 1239.1261150040953 930.087389754541 987.4046221315397 1189.228275084787 1136.317287005191 842.8995629782681 1.269367987280438 1.0337972481158841 1.2674026738360544 1.3378859763686495 1.0568577748302002 1.4700756405968651 1.1034379783852384 1.1714380520529433 1.4108777929399021 1.348105203649854 1.0 9.71921692458891 -11.087385300618964 1.4263119244918805 1.0005080761503151 1.2527062768466712 0.0 0.16734280510882124 0.4001373963406394 1.45890681254255 0.09518018391887478 0.021050369286951563 8.17738978449272e-12 11.087385300618964 0.2521982006963561 NTPSQHS(ph)HSIQHSPER ddPTM_A549_PD325901_60min_R1 1 NTPSQHSHSIQHSPER 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 NT(0.003)PS(0.019)QHS(0.373)HS(0.309)IQHS(0.296)PER 43.12 0.015813 9554500.0 521.12 520.89 434.32 622.9 622.75 795.42 600.65 614.4 775.66 829.99 705.84 True False 574.0237187717322 564.7872283636141 463.7955669783272 661.3751182914589 579.0101883708695 788.9423632406606 623.5080644382915 602.1453100125244 743.0617076303095 777.5842897530204 619.0261546884128 0.9273012366669182 0.9123802348026798 0.7492342019244388 1.0684122363526989 0.9353565822470209 1.2744895466295365 1.0072402591004166 0.9727299976777469 1.2003720715231008 1.256141253263229 1.0 9.27385655630977 -6.560486121444331 2.083910728826423 1.087531408534408 0.8719922248737914 0.4051018471152935 0.11817348832216722 0.24685871242257434 2.1375893238737143 0.016491421626793602 0.04247180709021262 2.751147520783764e-07 6.560486121444331 -0.21553918366061675 NTPSQHSHS(ph)IQHS(ph)PER ddPTM_A549_MK2206_60min_R1 1 NTPSQHSHSIQHSPER 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 NTPS(0.002)QHS(0.442)HS(0.557)IQHS(0.999)PER 63.69 0.0013499 3865400.0 377.13 295.43 181.48 197.5 218.83 260.65 263.74 94.546 163.96 402.75 420.79 True False 440.7803240567432 310.4661251164451 207.21659289430826 245.88750886611197 186.64039688234814 288.231809994533 311.65814409414344 107.94818503498156 126.82332179031806 311.7684952779769 316.2962297868042 1.393568062299845 0.9815675808899499 0.6551345649424282 0.7773962687821148 0.5900810041528188 0.9112717220461728 0.9853362599491401 0.3412882445919219 0.4009637480528992 0.9856851454983224 1.0 8.305132548980337 -5.3845203835560405 2.298298486776605 0.7097218310891749 1.472241320363652 0.42990850482344767 0.22039208062809337 0.3598466784891998 2.6659694414155606 0.03589665375448264 0.491008106444483 4.125528735458812e-06 5.3845203835560405 0.7625194892744771 NTPSQHSHS(ph)IQHS(ph)PER ddPTM_A549_PD325901_60min_R1 1 NTPSQHSHSIQHSPER 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 NT(0.005)PS(0.02)QHS(0.45)HS(0.533)IQHS(0.993)PER 40.756 0.040691000000000005 2261600.0 255.61 244.36 248.74 366.36 358.34 294.11 344.98 197.41 403.55 350.13 273.93 True False 281.55933902986345 264.9530747814946 265.62099219513027 388.98922513607147 333.1714346058891 291.7148656718598 358.1084026802995 193.47250268485092 386.5901968829271 328.02273204644024 240.23834658534076 1.171999986812447 1.1028758670188996 1.1056560951678576 1.6191804125570326 1.3868370280659392 1.2142726996675897 1.4906379758698818 0.8053356403538308 1.6091943787400202 1.3654053847307657 1.0 7.908322640622677 -11.210361017520954 1.6583870639361584 0.9999069820107575 1.324888995379749 0.0 0.2566603103899762 0.5120746301698662 2.5349640929011663 0.1784368627541711 0.03704398305331738 6.160826557173424e-12 11.210361017520954 0.32498201336899146 NTPSQHSHS(ph)IQHSPER ddPTM_A549_MK2206_60min_R1 1 NTPSQHSHSIQHSPER 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 NTPSQHS(0.013)HS(0.9)IQHS(0.086)PER 56.54 0.012357 5123700.0 191.36 133.94 115.85 227.32 140.56 94.62799999999999 0.0 163.67 156.81 114.1 179.46 True False 223.65688969718235 140.75697389600464 132.2792720233944 283.01341020478236 119.88381019870607 104.64147215101728 0.0 186.87072371835325 121.2927853741143 88.32473075410843 134.89512915596825 1.6580056751981467 1.0434548287748686 0.980608216553547 2.098025421492847 0.8887185990243887 0.7757246151566294 0.0 1.3853037162097221 0.8991635660459862 0.6547659007908709 1.0 7.075694445626529 -6.904229206927716 22.275506813433708 0.8940024062613047 1.3969683876537076 0.33250324801570397 0.42438537722058195 7.402074471740136 1713.513164769041 0.05813412413915567 0.10986329943544763 1.2467253582651355e-07 6.904229206927716 0.5029659813924029 NTPSQHSHSIQHS(ph)PER ddPTM_A549_MK2206_60min_R1 4 NTPSQHSHSIQHSPER 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 NTPSQHSHSIQHS(1)PER;NTPSQHS(0.003)HS(0.002)IQHS(0.995)PER;NTPSQHS(0.001)HS(0.013)IQHS(0.986)PER;NTPS(0.001)QHS(0.005)HS(0.013)IQHS(0.98)PER 139.9 3.5830999999999996e-11 81841000.0 438.45 619.1500000000001 605.053 620.52 1157.84 904.74 646.48 664.043 1125.02 958.8900000000001 886.6 True False 512.4496409266803 650.6620903965301 690.8586135137751 772.5474278562011 987.5232697813734 1000.4789862821938 763.9370478273371 758.1731287963981 870.2047662877752 742.2760830219723 666.432751084818 0.7689442634572141 0.9763357057968467 1.0366516537327986 1.1592278839817667 1.4818048305307396 1.5012452263992366 1.146307780618227 1.1376588673984664 1.3057653077092286 1.1138049290250167 1.0 9.380315491838648 -5.6637071040159785 1.5426466109044126 1.195530338591577 0.7659119914315156 0.47232483224060673 0.1501468279860169 0.4940483650867413 1.783527020096431 0.026201737526075623 0.25505123101594346 2.1691665364171735e-06 5.6637071040159785 -0.4296183471600614 NTPSQHSHSIQHS(ph)PER ddPTM_A549_PD325901_60min_R1 6 NTPSQHSHSIQHSPER 16 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 NTPSQHSHSIQHS(1)PER;NTPSQHSHS(0.003)IQHS(0.996)PER;NTPSQHS(0.002)HS(0.293)IQHS(0.705)PER;NTPSQHSHS(0.003)IQHS(0.997)PER;NTPSQHSHSIQHS(1)PER;NTPSQHSHS(0.013)IQHS(0.986)PER 170.38 7.026299999999999e-28 183977700.0 1386.95 1119.51 1310.94 1464.9 1827.17 1798.2100000000003 1674.66 1746.7600000000002 1687.16 1495.59 1626.18 True False 1527.752142981375 1213.855036620687 1399.9082717226188 1555.3835459707136 1698.835882594303 1783.5659739546259 1738.390102709114 1711.9195014932884 1616.2545324569428 1401.1581921610139 1426.1701692043564 1.0712271059726974 0.8511291729638986 0.9815857195383713 1.0906016543863373 1.1911873626848215 1.2505982893679906 1.2189219352967826 1.2003613162434523 1.1332830873602078 0.9824621369991938 1.0 10.477930417650137 -6.2427390787599 4.097252674232609 1.109619217694067 0.9526461700726297 0.35588255040801253 0.09542358634566596 0.21647969363587202 8.601638640832139 0.015193910254188533 0.04062409576372768 5.718220803999856e-07 6.2427390787599 -0.15697304762143716 NTQMYTEEEK ddPTM_A549_MK2206_60min_R1 1 NTQMYTEEEK 10 0 Q7Z572 Q7Z572 SPATA21 Spermatogenesis-associated protein 21 0 41.448 0.053765 63243000.0 1428.9 1742.8 1909.1 1391.8 2369.7 2045.4 1746.7 1880.1 2561.8 2247.8 2306.9 False True 1670.0633867490785 1831.501075899335 2179.839086921557 1732.7910624802755 2021.1202691226079 2261.842870373365 2064.052780348982 2146.60993256477 1981.5563903539698 1740.0204188351 1734.033062798971 0.9631093100689576 1.0562088550624502 1.2570919976594868 0.9992837504974151 1.1655603993272412 1.3043827819075349 1.1903191609376313 1.2379290675691283 1.1427442952878082 1.0034528499857231 1.0 10.759915691342577 -4.115444307496666 9.380880524342174 1.1073798426062138 1.113726310955481 0.0 0.11569160096726942 0.0 0.0 0.015869401479204105 0.0 7.665768371651485e-05 4.115444307496666 0.006346468349267109 NTRT(ph)IQR ddPTM_A549_PD325901_60min_R1 1 NTRTIQR 7 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 NT(0.2)RT(0.8)IQR 78.655 0.006603399999999999 605710000.0 1643.4 1554.7 1976.2 2021.8 1933.5 2148.3 1962.2 2094.8 2367.9 2036.9 2200.0 True False 1810.236758192863 1685.7200252201253 2110.3168158559815 2146.6819941590493 1797.6976302128892 2130.8049570665958 2036.8725947570406 2053.0175706611917 2268.38539759406 1908.2897863804715 1929.4139469490367 0.938231404958678 0.8736953663498379 1.0937605272279725 1.1126083117381713 0.9317324740269297 1.1043793688938637 1.0556949678828265 1.0640627812956407 1.175686223882146 0.9890515145275234 1.0 10.913946984888296 -5.764277229844583 24.99960607734658 1.0752924262416486 0.9059633562763698 0.42082017823639595 0.06671993610396613 46.09526864351269 406088.16860904836 0.01026301551739466 0.03408444504426053 1.7207697790040254e-06 5.764277229844583 -0.16932906996527874 NTRT(ph)PRT(ph)PR ddPTM_A549_PD325901_60min_R1 1 NTRTPRTPR 9 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 NT(0.004)RT(0.996)PRT(1)PR 95.417 0.00044348 17068000.0 1122.2 1203.7 1047.2 983.18 1367.8 1199.4 1318.7 1146.6 1492.0 1269.0 1121.2 True False 1236.124917880024 1305.140023385517 1118.269289325162 1043.9087956362114 1271.730446653834 1189.632484059803 1368.8838501203288 1123.730163509701 1429.2964285697612 1188.875123431105 983.2995078723908 1.2571194310415987 1.3273066984539705 1.1372621265160716 1.0616386841227692 1.2933296889424202 1.209837363423342 1.3921331589825 1.1428157489279807 1.4535717928532212 1.2090671396790662 1.0 9.941487110621406 -11.103342567794524 1.4563469505864521 1.000632490024156 1.2740013085081427 0.08094609545794207 0.12552467154726774 0.3327752466335161 1.2666368377477606 0.08722587876282754 0.019183270523379918 7.882381168121701e-12 11.103342567794524 0.27336881848398664 NTRT(ph)PRT(ph)PRT(ph)PQLK ddPTM_A549_MK2206_60min_R1 1 NTRTPRTPRTPQLK 14 3 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 3 NT(0.526)RT(0.614)PRT(0.893)PRT(0.967)PQLK 45.70399999999999 0.007225700000000001 6705100.0 705.08 853.24 824.51 679.58 979.4 893.89 761.45 657.47 1057.0 1089.0 1240.4 True False 824.0802664490454 896.6662715172993 941.4379160639525 846.0771305075053 835.3315574033352 988.4808464838409 899.7956086315529 750.6683859174295 817.591187682155 842.9941436566528 932.3744467015658 0.8838511923662971 0.9617018942222297 1.0097208470206902 0.9074434992300014 0.8959185446989282 1.0601758231156604 0.965058203616298 0.805114713914616 0.8768914576911924 0.9041369019055475 1.0 9.864765655286005 -5.246779842968913 21.99855107526803 0.9412949742258243 0.8838509773371152 0.049925037156553165 0.0677701416418379 1290.2351946181182 1935983.2571579816 0.009988216298581024 0.25550562086463524 5.665264056576351e-06 5.246779842968913 -0.05744399688870916 NTRT(ph)PRT(ph)PRT(ph)PQLK ddPTM_A549_PD325901_60min_R1 2 NTRTPRTPRTPQLK 14 3 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 3 NT(0.156)RT(0.88)PRT(0.967)PRT(0.997)PQLK;NT(0.279)RT(0.865)PRT(0.913)PRT(0.944)PQLK 57.989 0.0018657 37830000.0 2286.8 2578.4 2552.8 2575.3999999999996 2526.5 2672.2 2862.1000000000004 2644.9 2976.1 2942.7 3585.3999999999996 True False 2518.9542525468155 2795.6908168955874 2726.0483592334535 2734.4766088422257 2349.0473559518286 2650.4384891650852 2971.0187817012165 2592.1453946160887 2851.024866666532 2756.897419795676 3144.418529723217 0.8010874598072486 0.8890962797950672 0.8669483192090877 0.8696287033656821 0.7470530191025812 0.8429025793199312 0.9448547493334917 0.8243639865728238 0.9066938258112508 0.8767590553660641 1.0 11.618577541243985 -9.665871405807199 0.4751508200798721 1.0054201839245183 0.8400708783650503 0.17536712824486655 0.05932770876846598 0.4996790220523592 0.2443253002801583 0.03430256787281833 0.01494337749401948 2.1583834098676042e-10 9.665871405807199 -0.16534930555946792 NTRVQVGCRELRS(ph)TK ddPTM_A549_MK2206_60min_R1 1 NTRVQVGCRELRSTK 15 3 Q6X4U4 Q6X4U4 SOSTDC1 Sclerostin domain-containing protein 1 1 NTRVQVGCRELRS(0.5)T(0.5)K 48.14 0.016087 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NTRVQVGCRELRS(ph)TK ddPTM_A549_PD325901_60min_R1 2 NTRVQVGCRELRSTK 15 3 Q6X4U4 Q6X4U4 SOSTDC1 Sclerostin domain-containing protein 1 1 NTRVQVGCRELRS(0.5)T(0.5)K;NTRVQVGCRELRS(0.5)T(0.5)K 58.751999999999995 0.0022534000000000005 5822500.0 1942.7 1434.9 1181.6 1504.3 1287.9 1580.7 1175.5 1491.8 1881.2 1329.2 1977.4 True False 2139.921473859848 1555.8240587819873 1261.7904815380168 1597.217194486821 1197.442347013798 1567.827303279414 1220.2342957582823 1462.0448787055404 1802.1397060492209 1245.2740851573083 1734.1923357713763 1.2339585579519943 0.8971461969297367 0.7275954664952241 0.9210150232709752 0.6904899314303397 0.9040677155236289 0.7036326193977306 0.8430696229868969 1.0391809886806018 0.7180714961489003 1.0 10.760048198490292 -8.759289647371617 24.98379374673109 1.0185021395393374 0.8535623996502989 0.0 0.16781464067330465 60.53606183984688 703537.9156089379 0.023166502183326537 0.025642146535118763 1.7406455839835043e-09 8.759289647371617 -0.16493973988903854 NTS(ph)FRLPSLR ddPTM_A549_PD325901_60min_R1 1 NTSFRLPSLR 10 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 NT(0.024)S(0.973)FRLPS(0.004)LR 45.661 0.036241 3598300.0 1600.5 1614.5 1179.6 1392.1 1922.5 2099.4 1760.9 1833.5 1652.1 1570.8 1932.3 True False 1762.9815817741735 1750.559581088242 1259.6547495110397 1478.0868553115101 1787.4702322649482 2082.303182453853 1827.912013101454 1796.9294041470764 1582.6679823325085 1471.6194199255956 1694.6393498589205 1.040328481644748 1.032998308008118 0.7433173020654256 0.8722132266281681 1.0547791377638882 1.228758899424356 1.0786436732120193 1.0603609578030109 0.9339261374193077 0.8683968185018887 1.0 10.726762558889998 -5.5608986425305815 24.99998143396947 0.9838058779301591 1.0385000827720665 0.02831270243935058 0.12293922416225646 497.80721608256187 327332.13706754916 0.017130906417378 0.06634795973338112 2.748535543018135e-06 5.5608986425305815 0.05469420484190746 NTS(ph)LPPLWSPEAER ddPTM_A549_MK2206_60min_R1 1 NTSLPPLWSPEAER 14 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NT(0.02)S(0.98)LPPLWSPEAER 86.641 9.2535e-05 2078000.0 1726.4 2444.6 2464.5 1825.8 3638.0 2621.0 2493.0 3134.2 4675.2 3148.6 3047.2 True False 2017.774113572406 2569.0196982691714 2814.003158408764 2273.121081963277 3102.8550192294574 2898.3524803210075 2945.9458300853116 3578.4824480849447 3616.274664760277 2437.3290732023293 2290.4961415583775 0.8809332078593153 1.121599662037106 1.2285561662174247 0.9924142812206271 1.354665027777946 1.2653819527279644 1.2861605730891945 1.562317605848602 1.5788171825078403 1.064105295346209 1.0 11.161444417236723 -6.766314668117183 24.81488018673125 1.3065027941820013 1.072904690379939 0.2936313468552475 0.18257043293286151 147.65787977450273 751574.4226054015 0.03399080438977904 0.06573379726449781 1.7127159093245868e-07 6.766314668117183 -0.23359810380206225 NTS(ph)LPPLWSPEAER ddPTM_A549_PD325901_60min_R1 1 NTSLPPLWSPEAER 14 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NT(0.019)S(0.981)LPPLWS(0.001)PEAER 98.943 3.6806e-05 2497300.0 1698.9 1634.3 1923.7 1892.4 1913.5 1993.2 1706.9 1899.3 2399.2 1695.8 1970.5 True False 1871.3710773359219 1772.0281965763495 2054.253850147835 2009.2892500477724 1779.102361216635 1976.9680400433529 1771.8570135515201 1861.4169715279745 2298.369967442744 1588.7268985929618 1728.1409920286712 1.0828810183705626 1.025395615722395 1.188707321696211 1.1626882640455511 1.029489127000072 1.1439853861244171 1.025296559554166 1.0771210104465203 1.3299666971875244 0.9193271300902071 1.0 10.755005210614108 NTSAEKELSSPIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 NTSAEKELSSPISPK 15 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 NT(0.001)S(0.001)AEKELS(0.046)S(0.03)PIS(0.921)PK;NTSAEKELS(0.018)S(0.183)PIS(0.8)PK 90.35 8.995800000000001e-06 17911200.0 5352.9 5874.1 6608.200000000001 6073.0 7683.9 8798.7 7854.200000000001 8824.599999999999 9075.3 8337.7 8818.0 True False 5896.322467403293 6369.131022155742 7056.672190334732 6448.115417216296 7144.209372015939 8727.04630439969 8153.095878983157 8648.586430235218 8693.89670120587 7811.25619907922 7733.441901907552 0.7624447874818701 0.8235829664130165 0.9124879038134512 0.8337963223885844 0.9238072080497208 1.128481524151239 1.0542648386576863 1.1183359932014145 1.1241949977100634 1.0100620523382318 1.0 12.916894938092023 -7.050508146083293 3.63654453101462 1.0687739001073076 0.8397320578983462 0.8245156909533478 0.0519191073173889 0.08594868634372611 2.306113483254737 0.008957373165531628 0.016520856580006033 8.902087401637994e-08 7.050508146083293 -0.2290418422089614 NTSAS(ph)DEDER ddPTM_A549_MK2206_60min_R1 2 NTSASDEDER 10 0 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NTS(0.022)AS(0.978)DEDER;NTS(0.015)AS(0.985)DEDER 111.79 0.00015112 44090000.0 1203.33 1426.92 1522.47 1157.68 192.36 167.74 0.0 0.0 391.74 1832.26 2126.3 True False 1406.4226854060958 1499.5441331319016 1738.3791392098167 1441.3116519702298 164.06409881775122 185.49013546319955 0.0 0.0 303.0115154802342 1418.3511934401633 1598.2810271054022 0.8799595700345795 0.9382230707247273 1.0876554934510747 0.9017886263597492 0.10265034498650258 0.11605602038531049 0.0 0.0 0.1895858802935358 0.8874229058508538 1.0 10.642305385521917 -6.631435813366691 7.920716277757793 0.44622746177365397 0.9699450039961482 0.42424964047582137 0.33246925448755654 0.2669738635359521 17.832118859093576 0.061778780402026105 0.12890129825029753 2.336491398880322e-07 6.631435813366691 0.5237175422224942 NTSAS(ph)DEDER ddPTM_A549_PD325901_60min_R1 2 NTSASDEDER 10 0 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NTSAS(1)DEDER;NTS(0.008)AS(0.992)DEDER 172.76 1.4782e-10 108105000.0 2391.17 2133.7799999999997 2468.8900000000003 2124.98 2779.8 2512.06 2533.29 2676.41 2259.4 2442.41 2266.65 True False 2633.9198181136835 2313.6011291015616 2636.443722041633 2256.2351884202667 2584.5564377893925 2491.6026162308385 2629.6957372194797 2623.0269029469723 2164.4452752751467 2288.195815775701 1987.8664194781977 1.3249983964239764 1.1638614679696975 1.3262680511166756 1.1350034219163048 1.3001660536465132 1.2534054561296268 1.3228734644603324 1.3195186946392004 1.088828330750363 1.1510812765660268 1.0 10.957005098689411 -8.89985974100815 3.9817962765743324 1.0373640827284658 1.2644131777064862 0.5607263099134153 0.07232081078861806 0.08360927967475472 2.369283578235107 0.011421453872711542 0.011985037401696057 1.2593320578207165e-09 8.89985974100815 0.2270490949780204 NTSDRS(ph)SKTQASVK ddPTM_A549_PD325901_60min_R1 2 NTSDRSSKTQASVK 14 2 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 NT(0.003)S(0.003)DRS(0.496)S(0.496)KT(0.003)QASVK;NT(0.003)S(0.003)DRS(0.458)S(0.458)KT(0.065)QAS(0.011)VK 69.737 0.00055027 16373900.0 3085.1 3104.7 3192.0 3250.6 2918.5 3850.6000000000004 3982.8 4159.8 4168.0 3907.5 4124.8 True False 3398.2970808694167 3366.343964945597 3408.6283150553027 3451.3821793517654 2713.5146282784144 3819.241990262363 4134.367633471784 4076.8295257000277 3992.833454610432 3660.7797831418793 3617.475749261539 0.9394111575075894 0.930578170602192 0.9422670810581467 0.954085782069533 0.7501127350563009 1.055775423247001 1.1428874497129005 1.1269818537227956 1.1037623280337172 1.0119707876104436 1.0 11.820767629950563 -7.475289246513433 24.968756994078554 1.0652820741355256 0.9091091335820132 0.6198373316817929 0.06619212042780058 239.41968795387396 125616.20208192871 0.010689016981507666 0.017087268308104725 3.347424215227531e-08 7.475289246513433 -0.15617294055351238 NTSGLPAEPESVS(ph)SPPTLHMK ddPTM_A549_MK2206_60min_R1 2 NTSGLPAEPESVSSPPTLHMK 21 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 NTSGLPAEPES(0.013)VS(0.478)S(0.478)PPT(0.031)LHMK;NTSGLPAEPES(0.024)VS(0.475)S(0.475)PPT(0.025)LHMK 61.181000000000004 0.00047104 7212900.0 3112.2 4159.3 2706.4 2766.5 4174.9 3508.0 2693.9 3175.6000000000004 5295.5 5680.9 5847.0 True False 3637.4632740153165 4370.990604193312 3090.208215831804 3444.2926241929054 3560.77774045659 3879.2142315780584 3183.3467595935913 3625.7510248671256 4096.077705175832 4397.5807444435995 4395.0285310094 0.8276313221520557 0.9945306551148675 0.7031144835644743 0.783679241190696 0.8101830773869383 0.8826368712303047 0.7243062785902955 0.8249664363462971 0.9319797758480289 1.0005807046339272 1.0 12.101656815539792 -8.910663121899782 2.3437991499173236 0.973724787682852 0.8177897306924389 0.48009045259997984 0.07427196710605904 0.18249454175473004 1.9643424106457217 0.013953583359953071 0.014401412246170985 1.2283917134671543e-09 8.910663121899782 -0.1559350569904131 NTSGLPAEPESVSS(ph)PPTLHMK ddPTM_A549_MK2206_60min_R1 1 NTSGLPAEPESVSSPPTLHMK 21 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 NT(0.001)S(0.001)GLPAEPES(0.132)VS(0.305)S(0.523)PPT(0.038)LHMK 56.468 0.0017766 5055900.0 1557.5 1516.5 1502.1 1228.3 2145.4 1466.5 1100.4 1246.9 2441.7 2437.7 2566.4 True False 1820.367922780944 1593.683372504786 1715.120366908423 1529.233555140483 1829.8145019941958 1621.6840566160847 1300.3284361916874 1423.6518934710987 1888.65884859368 1887.0218769438218 1929.0920509633174 0.9436397407121756 0.8261313252050151 0.8890816620450823 0.7927219203338899 0.9485366450400612 0.8406462801017066 0.6740624095891906 0.7379906483779141 0.9790402939302733 0.9781917228892798 1.0 10.913706271128303 -8.850083057728542 8.304698982997605 0.9906163642347182 0.8311165630665183 0.4434869638654937 0.07689749379854784 0.1669006029775772 13.905225677148245 0.013752730349768608 0.014619261731258697 1.4122674261967659e-09 8.850083057728542 -0.15949980116819995 NTSGLPAEPESVSS(ph)PPTLHMK ddPTM_A549_PD325901_60min_R1 4 NTSGLPAEPESVSSPPTLHMK 21 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 NTSGLPAEPES(0.002)VS(0.309)S(0.675)PPT(0.014)LHMK;NTSGLPAEPES(0.001)VS(0.418)S(0.562)PPT(0.019)LHMK;NTSGLPAEPESVS(0.172)S(0.821)PPT(0.007)LHMK;NTSGLPAEPESVS(0.129)S(0.867)PPT(0.004)LHMK 116.72 4.0529e-15 27123500.0 8676.0 9302.4 9609.400000000001 9059.1 11241.0 11402.9 9949.1 11492.1 9919.300000000001 11333.7 12097.6 True False 9556.781133066366 10086.345894775637 10261.551670016426 9618.66003229115 10451.47093934475 11310.038563019445 10327.71844485642 11262.881050121961 9502.42631629493 10618.08824777866 10609.671893004856 0.9007612327170382 0.9506746293846979 0.9671884082279725 0.9065935430701588 0.9850889871755214 1.0660120951031817 0.9734248663868359 1.061567328726516 0.8956380943844312 1.000793271918178 1.0 13.373092420754618 -3.712460788566476 0.8798848952871952 0.9677000512386559 4.985857672193939e-10 0.13211326332467188 0.05201117517895426 53.4530144162885 3.318752497037867 0.008979694330865323 89.37707177343457 0.00019388276802687846 3.712460788566476 -0.9677000507400702 NTSLLYGNHT(ph)Y(ph)ISYSKR ddPTM_A549_PD325901_60min_R1 1 NTSLLYGNHTYISYSKR 17 1 H0YG02 H0YG02 CHN2 2 NT(0.001)S(0.001)LLYGNHT(0.414)Y(0.359)IS(0.442)Y(0.359)S(0.425)KR 42.172 0.017741 13326000.0 3689.2 3552.1 3926.7 4859.1 5758.8 5357.2 4304.2 5886.6 4579.3 4197.7 4629.6 True False 4063.7248681545 3851.4479330960335 4193.189475165307 5159.235571183218 5354.321754781477 5313.572739373996 4467.998686348614 5769.187145051637 4386.84794594471 3932.6565056160375 4060.1885494523926 1.0008709740099593 0.948588442676015 1.032757327422849 1.2706886658943601 1.3187372186209496 1.3087009814090163 1.1004411819621587 1.420916067021011 1.0804542430760695 0.9685896252641873 1.0 11.987331010359172 -3.7538897845636536 15.777965076759193 1.1037368946651325 1.118689396965162 0.0 0.16123967127740152 0.0 0.0 0.02246445105955595 0.0 0.0001762423258178432 3.7538897845636536 0.014952502300029424 NTSLPPLWS(ph)PEAER ddPTM_A549_MK2206_60min_R1 3 NTSLPPLWSPEAER 14 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NT(0.001)S(0.001)LPPLWS(0.999)PEAER 120.66 2.1988e-06 39984350.0 3400.6899999999996 3949.13 3535.92 3211.79 6344.0 4833.35 4329.099999999999 4449.54 6645.200000000001 5498.099999999999 5988.900000000001 True False 3974.643333111992 4150.12384890196 4037.366625230564 3998.6786941827318 5410.806003845986 5344.81188888193 5115.641433221952 5080.275921144751 5140.072810203838 4256.0753914037105 4501.690844768633 0.8829223218939797 0.921903345211894 0.896855595919552 0.8882615070800683 1.2019497096593887 1.1872898591188419 1.1363822193980258 1.1285261685725234 1.1418093750656073 0.9454392889617577 1.0 12.136251267257357 -6.742977534224798 24.9994041207383 1.0955232851024321 0.8991847251740034 0.65749596103457 0.07211355248687937 129.35083149714177 175154.522198023 0.0108756906647995 0.022607157074901532 1.807267612388189e-07 6.742977534224798 -0.19633855992842875 NTSLPPLWS(ph)PEAER ddPTM_A549_PD325901_60min_R1 2 NTSLPPLWSPEAER 14 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER 160.81 3.4665e-19 57756000.0 4308.200000000001 3997.8 4139.8 4588.200000000001 4994.4 5039.6 4518.7 4592.4 6230.9 5167.0 5744.7 True False 4745.565292470785 4334.708636280323 4420.75172263971 4871.602693441758 4643.610573744636 4998.559168474052 4690.661601227518 4500.800979331893 5969.036941538425 4840.754738194266 5038.138318653698 0.9419283458138372 0.8603790452181657 0.8774573945840044 0.9669450073263487 0.921691759940706 0.9921440921871668 0.9310307309071592 0.8933460525820989 1.1847703584155433 0.9608221196054464 1.0 12.29867501548701 -8.746242411086468 24.996710933982385 1.0872526730175398 0.9234804936922191 0.3875650622804975 0.06544938266410397 139.09181731190387 228784.81903154915 0.012415267142659898 0.014051978526901208 1.7937321360261817e-09 8.746242411086468 -0.16377217932532073 NTSMS(ph)PR ddPTM_A549_MK2206_60min_R1 1 NTSMSPR 7 0 Q9Y385 Q9Y385 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 1 NTS(0.001)MS(0.999)PR 81.547 0.015366 30704000.0 3410.7 4654.9 3870.1 3996.7 6459.2 4736.1 3924.4 4845.7 7036.5 5916.5 6137.6 True False 3986.3427763909895 4891.814527314558 4418.938374257562 4975.891679418679 5509.060236450501 5237.270958431261 4637.412681743602 5532.592814333869 5442.743984981539 4579.958540812294 4613.464530857413 0.8640670692769209 1.060334266058704 0.9578351247096945 1.0785585639896333 1.1941264963896108 1.1352143109373627 1.0051909255454357 1.1992273436435494 1.1797519951822422 0.9927373474270774 1.0 12.171634849691515 -4.234364825121861 0.7795851294698818 1.0980815203795031 7.944182914613313e-08 0.3914867643659228 0.08068022827100634 8.743164588120749 1.1571057081791347 0.013776808870348585 12.195097394377242 5.829551923325898e-05 4.234364825121861 -1.098081440937674 NTSMS(ph)PR ddPTM_A549_PD325901_60min_R1 2 NTSMSPR 7 0 Q9Y385 Q9Y385 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 1 NTS(0.004)MS(0.996)PR;NT(0.001)S(0.005)MS(0.995)PR 54.191 0.015284 185509000.0 2519.3999999999996 2777.4 2779.6 2685.6000000000004 3061.2 3448.8 3127.3 3428.6 2917.7 3061.7 2990.7 True False 2775.1676333157475 3011.461245286147 2968.2403710926455 2851.4834125598672 2846.1918725666883 3420.7141162459957 3246.311112824222 3360.2138833153313 2795.0792155750637 2868.383739487008 2622.86285960931 1.0580681422776044 1.1481581029877868 1.1316795920983767 1.087164508854501 1.0851470415767923 1.3041909925689101 1.2376976176740626 1.2811245052346556 1.0656596875947248 1.0936079745756397 1.0 11.356926660723255 -8.953510996831778 8.539703465052108 1.0287672224909603 1.1670437242725105 0.28821973436269177 0.07887398428288017 0.21008508616256136 34.70388932212112 0.01443987066828734 0.015230786514115876 1.1129842104149526e-09 8.953510996831778 0.13827650178155015 NTSS(ph)LELEESLPEQPETGRQEEELPR ddPTM_A549_PD325901_60min_R1 1 NTSSLELEESLPEQPETGRQEEELPR 26 1 Q6WKZ4;Q6WKZ4-1 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 NT(0.021)S(0.056)S(0.921)LELEES(0.002)LPEQPETGRQEEELPR 80.418 1.0537e-06 1592300.0 527.72 431.89 376.84 313.39 608.89 476.93 438.64 442.24 603.94 601.47 580.36 True False 581.293745913069 468.28688601808676 402.4146285230079 332.7473885396698 566.1236669564653 473.0460402056374 455.3326852330182 433.4191762694314 578.5585020579235 563.4930815524879 508.97939920515586 1.1420771583699503 0.920050765805814 0.7906304835744549 0.6537541382997082 1.1122722606073023 0.9294011524717237 0.8945994394745354 0.8515456164753965 1.1367031808388028 1.107103907216015 1.0 8.991463454590392 -8.757569953096079 24.998549183725338 1.0645542811991229 0.9061233727118372 0.24452586089798156 0.13150561124873675 110.14698068601588 711606.7267232991 0.0229700181073453 0.025570040290719 1.7475517564197373e-09 8.757569953096079 -0.1584309084872857 NTT(ph)ADKLAIK ddPTM_A549_MK2206_60min_R1 1 NTTADKLAIK 10 1 P38432 P38432 COIL Coilin 1 NT(0.207)T(0.793)ADKLAIK 53.754 0.0081374 10293000.0 2079.4 2275.4 2620.2 2456.3 3193.4 2957.9 2617.4 2283.5 3890.8 3815.2 3610.3 True False 2430.3518835510095 2391.2081409808056 2991.7837596521176 3058.093610267499 2723.655090271402 3270.9030147048866 3092.947699825628 2607.1931179254575 3009.540012330872 2953.343670228524 2713.762870788991 0.8955653088600244 0.8811411515426891 1.1024484828264658 1.1268831345527246 1.0036452040776631 1.2053017048442092 1.1397265889065664 0.9607298950064307 1.108991520491946 1.0882836160883422 1.0 11.406078947908556 -5.7558737789754835 24.973745420709356 1.0669056508210368 0.8883531429273388 0.5353892937760001 0.06835786159524809 83.45216317417112 374450.7266327283 0.009873196561640802 0.03619488815733473 1.7543903143676374e-06 5.7558737789754835 -0.17855250789369803 NTT(ph)ADKLAIK ddPTM_A549_PD325901_60min_R1 2 NTTADKLAIK 10 1 P38432 P38432 COIL Coilin 1 NT(0.015)T(0.985)ADKLAIK;NT(0.171)T(0.829)ADKLAIK 80.469 0.00047002 32700000.0 6033.5 6437.799999999999 6889.1 6832.2 7865.700000000001 8308.0 6927.400000000001 7569.0 7451.3 6177.1 7467.5 True False 6646.016478372054 6980.335999461067 7356.635753523651 7254.209476947989 7313.2403671918855 8240.342402508617 7191.025997818733 7418.030357234365 7138.147773593746 5787.0768518095165 6549.044840382699 1.0148069894698857 1.0658555819344742 1.1233143050359327 1.1076744248591956 1.1166880889403912 1.2582510279509838 1.0980266852774396 1.1326888940343378 1.0899524965195724 0.8836520428330651 1.0 12.677068793674428 -10.012709365701445 0.795714223226646 1.0067684673193766 1.116349711555172 0.43077529265810965 0.06761722443828262 0.4811722037796332 0.6144364858207498 0.026425400935109294 0.011856833627522961 9.711596597842291e-11 10.012709365701445 0.1095812442357953 NTTAAEEAR ddPTM_A549_PD325901_60min_R1 1 NTTAAEEAR 9 0 C9JQT6;C9JZD8;E7ETV8;E7ESZ1;E7EWK4;E7EX05;E7EV12;E7EQT5;E7ETV3;H0Y8C6;O00410;O00410-3 C9JQT6 IPO5 Importin-5 0 53.751000000000005 0.058727 1354700.0 971.31 1006.0 673.41 898.7 966.14 764.82 859.49 816.28 920.78 845.03 956.12 False True 1069.9166761593701 1090.7791505573066 719.1116521432933 954.2106579042122 898.2816594020588 758.5915594952628 892.198362280974 799.9986550407283 882.0828186987029 791.674661586278 838.5233013440516 1.275953422456386 1.300833439940094 0.857592926744724 1.1379655835141704 1.0712661865951987 0.9046755865690699 1.0640114125044442 0.9540565584264946 1.0519478913523699 0.9441295910528893 1.0 9.71170706452013 -5.74030016424004 24.999733587327754 1.0172623700828316 1.28839373275465 0.6607934657659287 0.07919784139843417 96.32487989681722 113914.26923618076 0.00932661488525625 0.036049369295844645 1.818443600149824e-06 5.74030016424004 0.27113136267181837 NTTIPTK ddPTM_A549_MK2206_60min_R1 2 NTTIPTK 7 0 P38646;P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PS65;P54652 P38646;P11142;P54652 HSPA9;HSPA8;HSPA2 Stress-70 protein, mitochondrial;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 114.5 0.020426 27238000.0 9389.400000000001 12013.5 10952.400000000001 10666.9 16363.400000000001 13606.2 13016.099999999999 13353.1 18447.1 16435.2 15777.1 False True 10974.101171209893 12624.935836192704 12505.615010004527 13280.290978855333 13956.365536464906 15045.9990529354 15380.956886872602 15245.942817153677 14268.86130396546 12722.47690525787 11859.210644191618 0.9253652288050696 1.0645679729431337 1.054506525367226 1.1198292514822417 1.1768376458765768 1.2687184252271124 1.2969629554902844 1.2855782121233175 1.2031881153029385 1.0727928938077393 1.0 13.5337203660262 -5.3419339167088475 1.0986791247883494 1.1444010226470938 0.8519878864813667 0.3824815805192492 0.09203095707630281 1.7987566519411355 1.8877234714178763 0.018038822821682576 0.5866048522453148 4.550572974932811e-06 5.3419339167088475 -0.29241313616572706 NTTIPTK ddPTM_A549_PD325901_60min_R1 2 NTTIPTK 7 0 P38646;P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PS65;P54652 P38646;P11142;P54652 HSPA9;HSPA8;HSPA2 Stress-70 protein, mitochondrial;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 114.28 0.020501 46984000.0 16572.5 17702.1 18737.6 19513.1 20958.4 21178.0 20881.2 21314.0 21708.0 19579.9 23234.0 False True 18254.92799997032 19193.918092525346 20009.246214342176 20718.379869534536 19486.354286554844 21005.533389543514 21675.84549263108 20888.87554949047 20795.688251603468 18343.621772473372 20376.365292460883 0.8958873546856033 0.9419696701073064 0.9819830930173529 1.0167848667887887 0.9563214050625929 1.0308773467717238 1.0637738959583236 1.0251521922420193 1.0205788889786802 0.9002401316028815 1.0 14.314609108079548 -5.203998429386572 0.8238077406052036 1.0147813932680367 0.813906027505895 0.3599559547065698 0.04194108924976538 1.08208069589899 0.49593076247012646 0.003907612042075614 0.20191278541321395 6.251749536987289e-06 5.203998429386572 -0.2008753657621417 NTTS(ph)SPCK ddPTM_A549_MK2206_60min_R1 1 NTTSSPCK 8 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 NT(0.012)T(0.006)S(0.863)S(0.118)PCK 79.97399999999999 0.0039949 7113000.0 1751.9 1848.6 1941.7 1262.2 3204.7 2917.3 2901.8 2808.6 2854.8 2419.0 2419.2 True False 2047.5778901572614 1942.6858439909975 2217.062257124082 1571.439056662312 2733.292875240418 3226.0067496529873 3429.019498492403 3206.7276509767635 2208.1923581788237 1872.546219931536 1818.445873476643 1.126004309516536 1.068322061341767 1.2192071754576526 0.8641659779831199 1.5030927865973271 1.774046066867672 1.8856868650902117 1.7634441023234295 1.2143294394333737 1.0297508698191054 1.0 10.828490268894456 -6.761837224757518 24.999888862478585 1.2896137653388262 1.080044882954752 0.14712308270713337 0.3141161622555966 26.536898997277735 1667711.6917564657 0.05603906286348826 0.11074912059280324 1.7304648225565604e-07 6.761837224757518 -0.20956888238407423 NTTS(ph)SPCK ddPTM_A549_PD325901_60min_R1 1 NTTSSPCK 8 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 NT(0.001)T(0.068)S(0.845)S(0.087)PCK 121.5 0.0011790999999999998 10711000.0 5220.3 4627.7 4065.3 4456.7 4306.9 3345.6 2484.0 3631.8 3332.9 4459.1 5526.4 True False 5750.261013018256 5017.692519914563 4341.195704634815 4731.980237099927 4004.398201998389 3318.3545428301454 2578.529979296957 3559.360899908019 3192.8298034719555 4177.551665005235 4846.687834735983 1.1864310657283115 1.0352827933239266 0.8957035923629474 0.9763327861113826 0.8262133519924795 0.6846643844168495 0.5320189926028976 0.7343903757114801 0.6587653078436566 0.8619394950640145 1.0 12.242783449117837 -5.606929049067168 0.921858654045222 0.7952252665061488 1.2690738983093255 0.5333744668948478 0.1247728207723726 1.139505237188817 1.0102651357372656 0.02550625848808023 0.4757458037654323 2.4721279849614217e-06 5.606929049067168 0.4738486318031767 NTTS(ph)SPCKGR ddPTM_A549_PD325901_60min_R1 2 NTTSSPCKGR 10 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 NT(0.001)T(0.003)S(0.498)S(0.498)PCKGR;NT(0.005)T(0.043)S(0.526)S(0.426)PCKGR 47.915 0.0089817 31174600.0 3067.13 3173.18 3461.25 2996.75 3092.1499999999996 3091.92 2807.27 3620.53 2508.45 2808.2799999999997 3894.65 True False 3378.5027796982304 3440.595014876179 3696.151239187086 3181.852441386948 2874.9680513383914 3066.7404286428077 2914.102196047086 3548.31568889916 2403.028569869851 2630.964721535936 3415.632740220486 0.9891294049020449 1.0073082431731468 1.0821278282244395 0.931555785819512 0.8417087755028388 0.8978542665113473 0.853166138657804 1.0388457889855303 0.7035383346614514 0.7702715489739982 1.0 11.737937144764853 -6.485206199947106 4.919725938215905 0.8723450686976456 1.0233870561047322 0.3566909071045138 0.09038949840269803 0.21608384517676382 12.671614153586338 0.01610296298855025 0.037235654616350235 3.2718531272314045e-07 6.485206199947106 0.15104198740708663 NTTSS(ph)PCK ddPTM_A549_PD325901_60min_R1 1 NTTSSPCK 8 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 NT(0.003)T(0.021)S(0.286)S(0.69)PCK 111.61 0.0015034 12418000.0 5052.7 3805.4 4929.2 4189.8 3931.8 3377.8 2661.5 3505.0 2810.6 3842.3 5669.4 True False 5565.646384398853 4126.094413052462 5263.725153687535 4448.594430273804 3655.6439319736396 3350.2923167060217 2762.784838928682 3435.0900253806913 2692.4802561247816 3599.696522268982 4972.099741287671 1.1193754498089503 0.82984948567904 1.0586523657154832 0.8947114220845679 0.735231415737228 0.6738184049056033 0.5556575657537348 0.6908731127930016 0.5415177482798212 0.7239791455464115 1.0 12.27963952208583 -6.612882175211473 3.6110387199458565 0.7429823659836117 0.9852199318402898 0.483574912331474 0.13409895676569084 0.25481542459538703 6.497163774835443 0.027071239433004317 0.059654216331963814 2.4384722900734e-07 6.612882175211473 0.2422375658566781 NTVELLVEDKGNQVYR ddPTM_A549_PD325901_60min_R1 2 NTVELLVEDKGNQVYR 16 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 113.69 2.034e-07 3938500.0 2428.4 2771.6 3131.0 2966.9 3118.0 4398.3 3679.7 3539.8999999999996 3155.4 3668.2 3551.3 False True 2674.929380306407 3005.1724589310456 3343.488488232507 3150.158674681217 2899.002436516053 4362.481703051719 3819.732997109101 3469.293917502171 3022.789511199078 3436.589225981071 3114.5126135455066 0.8588597036572326 0.9648933338272822 1.0735190070161051 1.0114451490678444 0.9308045258535266 1.4006948259187 1.2264304149857925 1.1139123028154276 0.9705497733585954 1.1034115614220994 1.0 11.60479069990636 -4.02599595548832 13.453598610752897 1.0284304892553717 0.5439244494535314 0.0 0.14756077483192723 0.0 0.0 0.019832039220088523 0.0 9.418983682235471e-05 4.02599595548832 -0.48450603980184037 NTVVPTK ddPTM_A549_PD325901_60min_R1 1 NTVVPTK 7 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 73.26 0.017569 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NTVVVS(ph)PHPK ddPTM_A549_MK2206_60min_R1 2 NTVVVSPHPK 10 0 Q9NXL9;Q9NXL9-4 Q9NXL9 MCM9 DNA helicase MCM9 1 NTVVVS(1)PHPK;NT(0.001)VVVS(0.999)PHPK 71.87899999999999 0.00074081 20103800.0 3304.7 4225.0 4190.5 3412.8999999999996 5694.6 4279.0 4413.9 4337.1 6124.1 6111.8 6209.5 True False 3862.452567842175 4440.034453565921 4784.775912076257 4249.060653210901 4856.931883591005 4731.800939829681 5215.84849555297 4951.897206811694 4737.001128178137 4731.140135170551 4667.509776518358 0.8275189025363541 0.9512640928794972 1.025123918571708 0.910348527728293 1.040583119509595 1.0137741893192733 1.1174799294033049 1.0609291557832512 1.014888314109031 1.0136326138988094 1.0 12.188437328971043 -4.224222962928597 0.8324522585322556 1.0188158680238895 4.753765045509213e-11 0.608284960191434 0.04641481646475742 5.860162916466132 0.8127753333493113 0.007291711346734413 8.263846563498893 5.967288526389222e-05 4.224222962928597 -1.0188158679763517 NTVVVS(ph)PHPK ddPTM_A549_PD325901_60min_R1 2 NTVVVSPHPK 10 0 Q9NXL9;Q9NXL9-4 Q9NXL9 MCM9 DNA helicase MCM9 1 NTVVVS(1)PHPK;NT(0.001)VVVS(0.999)PHPK 75.669 0.00046963 32603000.0 6678.8 6394.9 6774.200000000001 7428.4 8483.6 8669.3 7582.9 7801.6 8151.299999999999 7942.5 7950.6 True False 7356.826859327304 6933.8206659035 7233.93794857382 7887.235396879554 7887.741202831166 8598.700095097254 7871.471409022096 7645.990967763195 7808.729207909319 7441.009194524468 6972.726603005918 1.0550860915951876 0.9944202692407809 1.037461865413638 1.13115511993248 1.131227660558323 1.233190484105656 1.1288943131125682 1.09655682820936 1.11989608262326 1.067159178637045 1.0 12.767507200071378 -3.9181907180511137 10.242018141821365 1.0784584925271312 0.6490313481541895 0.0 0.06719356676119928 0.0 0.0 0.010361635050314032 0.0 0.00012072835466991459 3.9181907180511137 -0.4294271443729417 NVADDTRS(ph)EDLR ddPTM_A549_MK2206_60min_R1 2 NVADDTRSEDLR 12 1 O75494-2;O75494;O75494-6;O75494-3;Q6IQ42;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 1 NVADDT(0.102)RS(0.898)EDLR;NVADDT(0.151)RS(0.849)EDLR 81.619 0.00020046 6356700.0 1092.43 1262.3 969.53 837.69 1478.76 1194.1599999999999 1024.99 1281.0 1460.1399999999999 1600.69 1687.13 True False 1276.8054766507776 1326.5456782807726 1107.0239327133497 1042.9240876053334 1261.236362901526 1320.525218580745 1211.2174153145372 1462.5856728979686 1129.4206213644488 1239.0930172725134 1268.1690585807917 1.0068101472840307 1.04603220627801 0.8729308803293312 0.8223856910469571 0.9945333032434777 1.0412848426207033 0.9550914423586481 1.153304965928398 0.8905915293568065 0.9770724249172131 1.0 10.30853136745672 -5.688249453033915 24.999999996830486 0.9585940612978499 1.026421859054739 0.059010181963438435 0.08495695504417976 86.183714200984 29435.01847891673 0.011998737842764296 0.04647090727469889 2.0499843565640742e-06 5.688249453033915 0.06782779775688907 NVADDTRS(ph)EDLR ddPTM_A549_PD325901_60min_R1 2 NVADDTRSEDLR 12 1 O75494-2;O75494;O75494-6;O75494-3;Q6IQ42;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 1 NVADDT(0.458)RS(0.542)EDLR;NVADDT(0.005)RS(0.995)EDLR 104.95 4.7517e-05 10018500.0 1247.69 1674.1 1318.73 1081.1299999999999 1576.2800000000002 1426.79 1230.67 1352.96 1457.6799999999998 1727.91 1539.55 True False 1374.354570299168 1815.1822822544598 1408.2269479676954 1147.9089446756213 1465.5675306707901 1415.1706952907173 1277.5038202984636 1325.974151423413 1396.4187788187462 1618.8094677130339 1350.1951100115402 1.0178933104619385 1.3443851698136762 1.0429803348611293 0.8501800489159008 1.0854487027865654 1.0481231081325881 0.9461623811447107 0.9820611418242211 1.0342348068545522 1.1989448456076823 1.0 10.398952183721267 -5.976839082653777 24.780862168570252 1.0052949669827025 1.1842752987698775 0.24353957372606239 0.10788880872202364 140.79566969604426 150641.30810827765 0.010957119219775678 0.034064017850074804 1.0547776464136918e-06 5.976839082653777 0.17898033178717498 NVADDTRS(ph)EDLRR ddPTM_A549_MK2206_60min_R1 2 NVADDTRSEDLRR 13 2 O75494-2;O75494;O75494-6;O75494-3;Q6IQ42;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 1 NVADDT(0.002)RS(0.998)EDLRR;NVADDT(0.068)RS(0.932)EDLRR 58.824 0.0034988 21060400.0 2296.9 2919.4 2413.2 2520.4 3378.8 2865.7 2420.4 2894.6000000000004 3944.5 4242.5 4119.3 True False 2684.560566186551 3067.9849902344013 2755.428047016448 3137.898113145056 2881.7829958692937 3168.946471902293 2860.1553498349317 3304.9184143407206 3051.0770480721494 3284.1163034557862 3096.3641231036454 0.8670041569580252 0.9908346913538069 0.8898914783493036 1.0134137938530883 0.9306990009239398 1.0234411541772725 0.9237141486344476 1.0673545755426304 0.9853741119484027 1.0606363376165033 1.0 11.596359422716358 -2.508521714768183 0.3783240586556981 0.9969048051101801 2.534407943224082e-16 0.35995919516145847 0.0506553972899056 30.62032367675139 0.5332541543087265 0.009671773050707107 21.438304483285034 0.0031008323427243038 2.508521714768183 -0.9969048051101799 NVADDTRS(ph)EDLRR ddPTM_A549_PD325901_60min_R1 1 NVADDTRSEDLRR 13 2 O75494-2;O75494;O75494-6;O75494-3;Q6IQ42;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 1 NVADDT(0.025)RS(0.975)EDLRR 76.158 0.00033304 14968000.0 2036.6 2359.6 2001.4 2796.5 2676.0 2747.1 2905.5 2640.0 2500.1 3176.8 2785.8 True False 2243.354132734322 2558.45177301692 2137.227039395893 2969.233453687693 2488.046991698831 2724.728528398103 3016.070392450608 2587.3431289600653 2395.0294913319435 2976.2163058439187 2443.1642606411942 0.918216662249949 1.047187786033457 0.874778283976285 1.2153228915146437 1.0183707382187466 1.1152457377888354 1.2344934972399513 1.0590131701914436 0.9802981853964178 1.2181810096807932 1.0 11.25453514787673 -4.182984600009821 12.77133006201549 1.0243774373919483 1.0395515500487358 0.0 0.12224010684029964 0.0 0.0 0.013988154084818922 0.0 6.561685334873493e-05 4.182984600009821 0.015174112656787475 NVAEALGHS(ph)PK ddPTM_A549_MK2206_60min_R1 2 NVAEALGHSPK 11 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PK;NVAEALGHS(1)PK 79.346 0.0002987 22600000.0 2681.6000000000004 3236.1 3048.4 2930.6 5289.4 3930.3 3695.6 3191.2 5638.7 4265.0 4605.9 True False 3134.188521174564 3400.8036674993346 3480.7089584472624 3648.597131559631 4511.3362668258105 4346.20173727801 4367.0426833787715 3643.562372640124 4361.543453153615 3301.5335378288564 3462.12791362685 0.9052780831229474 0.9822871229320718 1.0053669434763741 1.0538597136168317 1.3030530296322393 1.2553556210824757 1.2613753137745718 1.0524054753434016 1.2597869177469405 0.9536139681131082 1.0 11.75744331293279 -6.3767796904782115 2.97468950255336 1.1515258415045233 0.9619242508949888 0.35708871198379155 0.1115953089752636 0.24857395705007188 4.192360270551933 0.017313193968261427 0.044838228025577596 4.199719739431196e-07 6.3767796904782115 -0.18960159060953452 NVAEALGHS(ph)PK ddPTM_A549_PD325901_60min_R1 2 NVAEALGHSPK 11 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PK;NVAEALGHS(1)PK 94.48700000000001 8.837299999999999e-05 31772000.0 6740.3 6913.9 6719.9 7745.8 9538.1 7707.7 7346.7 7940.0 8331.4 7727.8 8882.0 True False 7424.5702940533965 7496.558617334162 7175.952824041399 8224.240474011855 8868.176760658678 7644.931046679792 7626.282688768499 7781.630471190502 7981.260231223937 7239.865389165401 7789.570307636977 0.9531424713856513 0.9623841009541253 0.92122575965532 1.0558015589061083 1.1384680297402572 0.9814316765566158 0.9790376603047809 0.9989807093160593 1.0246085362884554 0.9294306493475463 1.0 12.927328032443388 -6.255543937430518 24.997444748306005 1.0178934042507015 0.9472641085898212 0.25893620200873735 0.050725892998052184 436.4763464360501 1850709.4978184777 0.006238116489469661 0.016044954500244277 5.552084440216335e-07 6.255543937430518 -0.07062929566088028 NVAEALGHS(ph)PKDPGGGGGPVR ddPTM_A549_MK2206_60min_R1 4 NVAEALGHSPKDPGGGGGPVR 21 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR 138.71 9.3135e-19 410083000.0 11078.1 13288.6 15137.0 14154.7 19910.800000000003 14788.5 14949.400000000001 14372.0 21343.8 20460.5 22560.499999999996 True False 12947.812446458804 13964.932979800262 17283.65421336315 17622.60213542862 16981.947695677267 16353.409254188184 17665.512471832073 16409.27501240407 16509.463379044842 15838.458839565614 16958.105211875743 0.7635176385974692 0.8234960690077943 1.0191972509558098 1.0391846208789606 1.0014059639036104 0.9643417734391639 1.0417149941646153 0.9676361130789937 0.9735441060645904 0.9339757385438296 1.0 14.04968736111671 -5.671644779809575 4.437906222066488 0.9939765442534856 0.7783682021106163 0.8544439086082984 0.0320957578032431 0.04372510808129442 1.5099430783172703 0.003749424067484191 0.01581262595943572 2.1298804155633387e-06 5.671644779809575 -0.21560834214286928 NVAEALGHS(ph)PKDPGGGGGPVR ddPTM_A549_PD325901_60min_R1 3 NVAEALGHSPKDPGGGGGPVR 21 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR 124.09 1.6272000000000003e-15 360406000.0 15317.099999999999 15049.0 16858.6 16551.199999999997 19813.2 19121.6 17891.5 18642.0 19315.6 19305.7 19401.600000000002 True False 16872.080716146953 16317.232044470087 18002.72597499729 17573.53003349749 18421.589183829332 18965.880029346266 18572.370823104473 18270.170685633908 18503.83250380836 18086.734807268636 17015.326196875663 0.9915813849777965 0.958972625953315 1.0580300234445656 1.032805943898056 1.0826468426571736 1.1146351124804625 1.09150836182704 1.0737478949412476 1.0874803274242262 1.0629672683318703 1.0 14.054547188689805 -5.767471685901074 24.973066978129914 1.055501880557349 0.9752769979469131 0.531921243328314 0.031730325249695046 104.8660561229393 434142.13348831655 0.005871598272533531 0.01896315898421065 1.7081590809234887e-06 5.767471685901074 -0.08022488261043592 NVALLSQLYHS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 NVALLSQLYHSPAR 14 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLSQLYHS(1)PAR;NVALLSQLYHS(1)PAR 113.86 1.3849e-06 22420500.0 915.11 1068.44 1098.02 1117.2 1506.71 1240.14 1078.94 1257.01 1773.5500000000002 1659.1999999999998 1519.26 True False 1069.5581957085526 1122.8190323237811 1253.7357468030007 1390.9140501530132 1285.0749549266689 1371.3707916616916 1274.9694319744262 1435.1950169316756 1371.8437567773772 1284.3855676355531 1141.9858125570959 0.9365774810403592 0.9832162711457885 1.0978557990976072 1.217978397681251 1.1252985289275816 1.2008649990063927 1.1164494496823547 1.2567538065276271 1.2012791592441865 1.12469485479824 1.0 10.157329012174872 -5.739238632470794 3.325570473368647 1.1272401886204406 0.9474523321364277 0.5153845807527278 0.06911788996667295 0.20583362770154395 4.602597166410995 0.012911390448157629 0.05625227693390842 1.8228937987686162e-06 5.739238632470794 -0.17978785648401296 NVALLSQLYHS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 NVALLSQLYHSPAR 14 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLSQLYHS(1)PAR;NVALLS(0.001)QLY(0.007)HS(0.992)PAR 136.88 1.0819000000000002e-09 58426000.0 1644.06 1837.5 2065.46 1805.6100000000001 2454.8 2148.19 1983.44 2017.5 2283.34 1872.69 2068.51 True False 1810.9637609069964 1992.3525737068105 2205.6345362199654 1917.1384288621623 2282.3833166002573 2130.695852870124 2058.9208945800146 1977.2593798018681 2187.3791603287405 1754.4480338047254 1814.0963833652522 0.9982731774965315 1.098261697656264 1.2158309538815064 1.056800755705031 1.2581378462186812 1.174521856946521 1.1349567274703447 1.08994174616783 1.2057678855359535 0.9671195256726791 1.0 10.825035393289868 -10.9611704303796 1.1932151888528526 0.9990339047085884 1.1452920126200168 0.38456296212177465 0.07308151376468429 0.4271865177909352 1.0695217879752135 0.051722086599435654 0.011670041747171764 1.0935271487059308e-11 10.9611704303796 0.14625810791142835 NVALLSQLYHS(ph)PARR ddPTM_A549_MK2206_60min_R1 3 NVALLSQLYHSPARR 15 1 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLS(0.008)QLYHS(0.992)PARR;NVALLS(0.001)QLY(0.016)HS(0.983)PARR;NVALLSQLYHS(1)PARR 79.97 9.259200000000001e-05 15185900.0 1413.7500000000002 1871.0600000000002 1524.0 1405.13 2489.99 2058.94 1491.17 1393.5099999999998 2506.28 2050.04 2965.42 True False 1652.356437131018 1966.28896205658 1740.1261162162539 1749.386913078682 2123.715769469807 2276.815664186241 1762.0962869828777 1591.044309945393 1938.6115817067478 1586.9345401853845 2229.024372571556 0.7412913279296027 0.8821298619485859 0.7806671553836465 0.7848217967488929 0.9527557417507025 1.0214404526943552 0.7905235620864935 0.7137850664727613 0.869713048256279 0.7119413137482151 1.0 11.122196676044805 -10.164350899401636 0.835381900707098 0.9926161206502088 0.8405572753187713 0.0 0.12072855535544863 0.5467314467302421 0.7505520500928625 0.04432354455077812 0.0181191458114513 6.849345922931639e-11 10.164350899401636 -0.15205884533143743 NVALLSQLYHS(ph)PARR ddPTM_A549_PD325901_60min_R1 4 NVALLSQLYHSPARR 15 1 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLSQLYHS(1)PARR;NVALLSQLYHS(1)PARR;NVALLSQLYHS(1)PARR;NVALLS(0.001)QLY(0.018)HS(0.981)PARR 140.81 4.4073000000000004e-14 39650200.0 4678.08 5280.8 5576.11 5551.860000000001 6397.77 6523.65 5865.75 6892.69 7104.02 6216.16 6885.0 True False 5152.995237779522 5725.83154896921 5954.538356473382 5894.785783011111 5948.412706308309 6470.523557309265 6088.974326111562 6755.209890739298 6805.4627442950095 5823.670596743497 6038.188647610966 0.8534008356658955 0.9482697350362943 0.9861464594732925 0.9762506816250941 0.9851319747457414 1.0716000997864408 1.0084107472396857 1.118747737934956 1.1270702426608714 0.9644731121555231 1.0 12.559900115498602 -5.415280103551019 0.5475834874474586 1.063004261463131 0.7637555843216923 0.5353854365447233 0.05105370564106196 1.825980962208389 0.40277218501828255 0.010226853285939997 0.3348743653224911 3.843438148333585e-06 5.415280103551019 -0.29924867714143866 NVDAAVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 NVDAAVSPR 9 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 NVDAAVS(1)PR;NVDAAVS(1)PR 120.86 0.00013407 86749000.0 6262.299999999999 8606.400000000001 8690.5 7910.700000000001 11625.0 8682.7 7824.3 9012.6 11360.9 9568.400000000001 10977.5 True False 7319.223141464597 9044.428999093438 9922.94357806913 9848.821855124814 9914.977899544378 9601.497550890199 9245.87403062034 10290.163649929926 8787.67428962933 7406.891794457593 8251.4837864128 0.8870190296582418 1.0960972878582553 1.2025647550091072 1.193581919332163 1.201599391841592 1.1636086065757507 1.1205104766545066 1.247068274783996 1.0649811012292651 0.8976436221875702 1.0 13.010437853574649 -8.966725860386772 6.9669958398300755 1.0282178844153742 1.1447033219413194 0.30109206498853536 0.09865644116685574 0.18925001481834455 25.889774091343515 0.01610314399653648 0.01677763691868494 1.0796280005382494e-09 8.966725860386772 0.1164854375259452 NVDAAVS(ph)PR ddPTM_A549_PD325901_60min_R1 4 NVDAAVSPR 9 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 NVDAAVS(1)PR;NVDAAVS(1)PR;NVDAAVS(1)PR;NVDAAVS(1)PR 127.7 5.1791000000000006e-05 160739000.0 20465.5 19745.9 22191.5 22892.199999999997 25686.1 24001.300000000003 23747.5 24260.6 25366.5 22577.2 24865.699999999997 True False 22543.142494095187 21409.956291242084 23697.548638330125 24306.199202041644 23881.996948234428 23805.84137040564 24651.224107630613 23776.70330092749 24300.434219379946 21151.671738950943 21807.376536659405 1.0337393155109198 0.9817758800674975 1.0866758135025198 1.1145861200306042 1.0951338831650599 1.0916416897001207 1.1304075969977656 1.0903055331280926 1.114321760736766 0.9699319724861821 1.0 14.412528601375678 -5.768269325889548 24.987657584364772 1.0734353091150026 1.0077575935851184 0.23385430109821592 0.04798573513783822 170.67096097489997 624417.7976980418 0.007097576475782702 0.02279981604800218 1.7050246972073756e-06 5.768269325889548 -0.06567771552988422 NVDLDLAAS(ph)HR ddPTM_A549_MK2206_60min_R1 2 NVDLDLAASHR 11 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 NVDLDLAAS(1)HR;NVDLDLAAS(1)HR 42.242 0.024669999999999997 2674600.0 121.74 110.88 196.817 124.73 247.14000000000001 139.51 96.719 192.79700000000003 225.469 106.06 176.58 True False 142.28673574276218 116.52331839322825 224.7286101150489 155.2888555993425 210.7860333843784 154.27285560075694 114.29159034898565 220.12656516604966 174.4006315000075 82.10097233813094 132.73031263992468 1.0719987990140767 0.8778953057191743 1.6931219828035842 1.1699577324180304 1.5880775776985168 1.1623031132253385 0.861081301443475 1.658449835518858 1.3139472666890155 0.6185548026309353 1.0 7.052354077447572 -10.705035669931508 1.0382391383180205 1.0046831163391174 1.270500384409484 0.20732304996811646 0.29762537813966067 0.8795205502216322 1.7309785506842352 0.1635820616643351 0.04594169447776707 1.9722607416672407e-11 10.705035669931508 0.26581726807036654 NVDLLSDMVQEHDEPILK ddPTM_A549_MK2206_60min_R1 2 NVDLLSDMVQEHDEPILK 18 0 P55209;F8W118;P55209-2;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8W020;H0YH88;F8VXI6;F8VUX1;F8W543;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 ; 168.09 3.8288999999999994e-30 5454000.0 1820.63 2265.16 2570.3 2432.3999999999996 3407.6000000000004 2901.3 2112.33 2507.7 4086.8999999999996 3830.1 3598.8 False True 2127.9078338700924 2380.446968719379 2934.8071893114425 3028.338109194585 2906.346554020426 3208.3136402729274 2496.1130185576044 2863.17415450916 3161.223675438221 2964.877749880025 2705.118638172845 0.7866227395140696 0.8799787688155655 1.0849088642166687 1.1194843976381224 1.074387833867242 1.1860158719101364 0.9227369858512335 1.0584283122026297 1.1686081456203523 1.0960250349251346 1.0 11.40147615226328 -5.651635352940089 3.37424150911502 1.0792365308798946 0.8022894224825271 0.6570224589385939 0.06966556139682499 0.11869939056547815 2.536766168918638 0.010968966180713434 0.05289194972699846 2.230306997966432e-06 5.651635352940089 -0.27694710839736747 NVDNAEGS(ph)DTDY ddPTM_A549_MK2206_60min_R1 1 NVDNAEGSDTDY 12 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 NVDNAEGS(0.646)DT(0.348)DY(0.006) 55.261 0.018852 3255500.0 0.0 201.13 0.0 106.84 0.0 132.06 0.0 123.57 105.36 0.0 296.0 True False 0.0 211.36665790431096 0.0 133.01580479622987 0.0 146.03450154566667 0.0 141.08642591725365 81.49612822534712 0.0 222.4950308155945 0.0 0.9499837238140081 0.0 0.5978371935257931 0.0 0.6563494969319164 0.0 0.6341104581081054 0.3662829139446791 0.0 1.0 7.7976293051896945 -10.719061312051247 0.5572214610556447 1.1112652628451776 0.34740324257650057 0.0 0.4321078373854737 0.9979205224001269 0.42911274038491787 0.3975491857433412 0.06173815506563334 1.909583651743047e-11 10.719061312051247 -0.763862020268677 NVDNAEGS(ph)DTDY ddPTM_A549_PD325901_60min_R1 2 NVDNAEGSDTDY 12 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 NVDNAEGS(0.498)DT(0.498)DY(0.005);NVDNAEGS(0.497)DT(0.497)DY(0.006) 62.823 0.007366199999999999 9674000.0 0.0 0.0 339.29999999999995 379.79 0.0 336.21 367.85 174.91 293.59 316.5 486.37 True False 0.0 0.0 362.3269383766493 403.24876573432846 0.0 333.4720172300704 381.8487330452435 171.4212828357594 281.25143328672664 296.51613598577217 426.549573353456 0.0 0.0 0.849436879113722 0.9453737406511961 0.0 0.7817895927274604 0.8952036454830266 0.40187892227408906 0.659364000942677 0.6951504690407158 1.0 8.736569610275073 -7.334659208739968 0.17395687773371957 1.0891851075210366 1.0134855690043398e-18 0.2516664034527758 0.32795277943199574 6.301445185156687 0.4650772632862285 0.7997270079300156 1.9161639029148314 4.627439945854788e-08 7.334659208739968 -1.0891851075210366 NVEPQS(ph)GDL ddPTM_A549_PD325901_60min_R1 1 NVEPQSGDL 9 0 Q8TEQ0 Q8TEQ0 SNX29 Sorting nexin-29 1 NVEPQS(1)GDL 70.942 0.0033281999999999995 2709800.0 454.27 349.88 356.97 204.77 186.04 485.4 372.94 267.23 457.51 497.5 556.21 True False 500.387155984101 379.36561550396664 381.19613083499104 217.4181778335881 172.9731922031579 481.44706333385716 387.13243578059854 261.8998880121206 438.28244573388184 466.0877650961189 487.79969610569293 1.0258045668722202 0.7777077733598432 0.7814603696522111 0.44571199934999445 0.3545988109137307 0.9869769644742474 0.7936299240676802 0.5369004739096311 0.8984885583834352 0.955490068602114 1.0 8.930145049124594 -8.934780701833612 7.0833541405717 0.9557548120017304 0.7080658733357982 0.23152210374836535 0.19574405000432038 0.23467073993834006 20.625326178231923 0.035112155775623 0.03711086416765768 1.1620352385372532e-09 8.934780701833612 -0.24768893866593222 NVFEVGPGDS(ph)PTFPR ddPTM_A549_MK2206_60min_R1 2 NVFEVGPGDSPTFPR 15 0 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 NVFEVGPGDS(0.984)PT(0.016)FPR;NVFEVGPGDS(0.975)PT(0.025)FPR 99.48100000000001 9.5287e-06 5644400.0 2480.1000000000004 3253.3 3435.6000000000004 2602.95 3659.3999999999996 3572.5 2874.77 3216.3 5143.2 4301.2 4374.1 True False 2898.6802473765774 3418.879074032192 3922.8197407300304 3240.672866850864 3121.107107577867 3950.5395787664233 3397.0784973743885 3672.2203745056477 3978.2734120027053 3329.5559326868656 3287.8902509813943 0.8816231765982327 1.0398397796312389 1.1931115217605326 0.985639002361336 0.9492735065126505 1.2015424108475752 1.0332092126129826 1.1168926254182407 1.2099775565243518 1.012672467304234 1.0 11.682946427657523 -7.249942408777467 24.92566217214725 1.1038464723543973 1.0203917434896077 0.15957219740307926 0.09572571911050184 1227.8410427456206 2661984.7427280243 0.01567898760296982 0.027000853267688963 5.62415901481715e-08 7.249942408777467 -0.08345472886478955 NVFEVGPGDS(ph)PTFPR ddPTM_A549_PD325901_60min_R1 2 NVFEVGPGDSPTFPR 15 0 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 NVFEVGPGDS(0.998)PT(0.002)FPR;NVFEVGPGDS(0.906)PT(0.094)FPR 226.74 3.7057999999999995e-54 21595000.0 8411.5 8934.7 8817.4 10275.5 10149.8 9149.099999999999 7456.5 9043.9 9112.4 9571.5 9485.8 True False 9265.429287780982 9687.658525332383 9415.801787333534 10910.19429764631 9436.91306290911 9074.592762974431 7740.261187853362 8863.512319697702 8729.437517224596 8967.15385651759 8319.106735440537 1.1137529043002876 1.1645070598819975 1.1318284626907027 1.3114622332187884 1.1343661480753173 1.0908133591212887 0.9304197474566334 1.0654403894035789 1.0493238991676828 1.077898642448748 1.0 13.022212911882393 -7.354341631512311 2.970891505190898 1.0213492613558766 1.178119505578405 0.5613288544967691 0.06131423049994037 0.13390034916638024 2.290966891450551 0.00875204455460396 0.014713023643256178 4.422403534805615e-08 7.354341631512311 0.1567702442225285 NVFEVGPGDSPT(ph)FPR ddPTM_A549_MK2206_60min_R1 1 NVFEVGPGDSPTFPR 15 0 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 NVFEVGPGDS(0.357)PT(0.643)FPR 138.91 4.6427999999999997e-10 5123300.0 4848.3 4526.3 5230.9 5451.4 8415.1 5383.6 5833.7 6704.1 9470.8 7629.5 8177.7 True False 5666.574510445494 4756.669336609567 5972.720276453811 6786.993244722647 7177.249937415565 5953.288978655545 6893.60777736409 7654.426705445176 7325.678921759847 5905.990651082127 6146.9513969617865 0.9218511981803328 0.7738257600280709 0.9716556860049208 1.104123459976796 1.1676113041926794 0.9684945583916669 1.121467754043305 1.2452395034762238 1.1917580681345004 0.9607999591474309 1.0 12.585655362600564 -6.045351292495432 3.369017188601123 1.102842838390778 0.8486072934506977 0.5194062081493755 0.09221556827405757 0.13979974524954367 3.187751055916298 0.013555213157234142 0.04282266595358561 9.008421688300713e-07 6.045351292495432 -0.25423554494008027 NVFSSSGTSFS(ph)GR ddPTM_A549_MK2206_60min_R1 2 NVFSSSGTSFSGR 13 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NVFSSSGT(0.011)S(0.216)FS(0.772)GR;NVFS(0.002)S(0.006)S(0.004)GT(0.026)S(0.07)FS(0.892)GR 77.068 0.00094432 6534100.0 4650.7 4618.5 5274.2 5007.9 7240.5 5419.0 5133.6 5257.799999999999 7426.0 7099.9 7109.6 True False 5435.62446130166 4853.5619227915295 6022.160867551031 6234.835724813173 6175.43204143235 5992.434983158928 6066.308669605273 6003.109251337187 5744.022856885226 5496.027658905295 5344.090105022135 1.0171281461353927 0.9082110943882423 1.1268823596165933 1.1666786304658217 1.1555628591720335 1.1213199750370055 1.1351434108314211 1.123317371781538 1.0748364537280637 1.0284309491227284 1.0 12.383728617506367 -2.1571236251143087 17.442399783286962 1.0639250501546893 0.10056452321134524 0.0 0.07787821349587866 0.0 0.0 0.011294219750791796 0.0 0.006964282424776549 2.1571236251143087 -0.9633605269433441 NVFTS(ph)AEELER ddPTM_A549_MK2206_60min_R1 2 NVFTSAEELER 11 0 B8ZZF5;C9J5M4;Q9H8M9 B8ZZF5 EVA1A Protein eva-1 homolog A 1 NVFT(0.04)S(0.96)AEELER;NVFT(0.037)S(0.963)AEELER 117.2 1.7847e-05 7876700.0 1414.9 1642.8899999999999 1469.13 1135.4499999999998 2181.3 1475.2399999999998 1385.46 1875.31 2463.1000000000004 2295.9 2205.3999999999996 True False 1653.7005290162165 1726.5060836494483 1677.474725142249 1413.635300972288 1860.433659550638 1631.3489176149426 1637.180148315282 2141.1409353960116 1905.2117827624581 1777.2545954281986 1657.7383140564605 0.997564280799927 1.041482886056192 1.0119056252234975 0.8527493688151201 1.1222722209986116 0.9840810843196696 0.9875986664681273 1.2916036971822604 1.1492837962467273 1.072095987863901 1.0 10.695000569656425 NVFTS(ph)AEELER ddPTM_A549_PD325901_60min_R1 2 NVFTSAEELER 11 0 B8ZZF5;C9J5M4;Q9H8M9 B8ZZF5 EVA1A Protein eva-1 homolog A 1 NVFT(0.017)S(0.983)AEELER;NVFT(0.038)S(0.962)AEELER 197.36 6.919699999999999e-24 11772900.0 4073.1 3875.1 3497.7 3802.0 4880.1 3941.1000000000004 3728.4 4725.799999999999 4503.799999999999 4253.700000000001 4882.0 True False 4486.59811354226 4201.668276664631 3735.074955378738 4036.840905031508 4537.33861143104 3909.004988267542 3870.286302258765 4631.540211681621 4314.520948386387 3985.1206560590176 4281.544949547816 1.0478923300842842 0.9813439602236055 0.8723661667439012 0.9428467883906833 1.0597433087582646 0.9129893611604805 0.9039462035000975 1.081745086471828 1.0077018924773997 0.9307669785131872 1.0 12.063915756257428 -8.249160108095111 24.927916418895485 1.009596734855903 0.9589490020692645 0.10490002120880304 0.06250862813887335 1085.7611398410418 2204184.4686094886 0.009189027614188322 0.011819099792552282 5.634299020491639e-09 8.249160108095111 -0.05064773278663848 NVHS(ph)EDFENR ddPTM_A549_MK2206_60min_R1 4 NVHSEDFENR 10 0 Q9H2P0;A0A669KBJ7 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 NVHS(1)EDFENR;NVHS(1)EDFENR;NVHS(1)EDFENR;NVHS(1)EDFENR 176.18 8.5519e-11 258960000.0 5323.21 6192.469999999999 6308.889999999999 5503.04 8814.32 6758.78 6588.200000000001 6383.550000000001 8760.11 7677.0599999999995 8092.869999999999 True False 6221.637708010756 6507.6402728220955 7203.58546806796 6851.285047040854 7517.745204259096 7473.98961348494 7785.1906609579 7288.437761301978 6775.959072021121 5942.806814050268 6083.1870271506805 1.0227595634068356 1.0697748143821622 1.184179515756573 1.126265724933653 1.2358234541705932 1.2286305813263316 1.2797881482536673 1.198128173401867 1.1138830750687818 0.9769232455826423 1.0 12.570611645109866 -9.71037228978072 0.9935068652883472 1.0191132577179463 1.1689854054917703 0.44651728292374127 0.07326177133304954 0.35274421581634435 0.7211954659517675 0.024729851866132035 0.015748815095911337 1.9481738528264603e-10 9.71037228978072 0.14987214777382407 NVHS(ph)EDFENR ddPTM_A549_PD325901_60min_R1 4 NVHSEDFENR 10 0 Q9H2P0;A0A669KBJ7 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 NVHS(1)EDFENR;NVHS(1)EDFENR;NVHS(1)EDFENR;NVHS(1)EDFENR 177.93 1.6553e-11 313023000.0 7647.200000000001 6936.33 7626.539999999999 8242.0 9165.1 8578.7 8171.099999999999 7769.599999999999 8713.099999999999 7693.0 8705.5 True False 8423.538114428902 7520.878872152256 8144.122866510617 8751.089621059891 8521.374993878535 8508.837911458922 8482.055681897487 7614.629232866712 8346.91870762144 7207.262667104407 7634.7786887112925 1.1033113673463595 0.9850814514469886 1.0667136794092587 1.1462139215638516 1.1161259993663148 1.1144838977506977 1.1109759729432591 0.9973608330161066 1.0932757906870452 0.9440041369844805 1.0 12.89837062251902 -11.015488294247923 0.5730472016017772 0.978085261664409 1.0836233027282638 0.39714082505514614 0.05006888829311585 1.6789594706598647 0.6464709100233578 0.0990426327996833 0.010460176945639785 9.64965320638412e-12 11.015488294247923 0.10553804106385478 NVIFQPVAELKK ddPTM_A549_PD325901_60min_R1 1 NVIFQPVAELKK 12 1 Q01813;Q01813-2;B1APP6;H0Y757 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 61.641000000000005 0.0081163 1964600.0 1715.0 1832.1 1840.4 1894.0 2185.4 2319.2 1959.5 2227.8 2291.8 2017.8 2169.5 False True 1889.1055374837285 1986.4974967555086 1965.3006112242426 2010.9880784139073 2031.9050432207118 2300.3132041283084 2034.0698447795423 2183.3647813247094 2195.4836159491815 1890.3957636400971 1902.6652535936073 0.9928733043901085 1.0440604268163123 1.0329197989569288 1.0569321506322293 1.0679256581697734 1.2089952238228214 1.0690634313827658 1.1475296441141911 1.1538990433564293 0.9935514195519488 1.0 10.893806047293017 -6.497809589504063 2.082146679944714 1.0898515814375005 1.0237462544248073 0.19765823228751755 0.0611620176660327 0.513179981212453 4.382018369732182 0.010303022198790219 0.027650743419309544 3.1782672331678906e-07 6.497809589504063 -0.06610532701269323 NVIPDT(ph)PPSTPLVPSR ddPTM_A549_MK2206_60min_R1 2 NVIPDTPPSTPLVPSR 16 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 NVIPDT(0.758)PPS(0.107)T(0.107)PLVPS(0.027)R;NVIPDT(0.934)PPS(0.032)T(0.032)PLVPS(0.002)R 76.82 0.00046991 10798400.0 3251.8999999999996 3355.3 3158.5 3038.1000000000004 3706.2000000000003 3692.3 3147.5 3366.8 5038.2 4443.1 4781.200000000001 True False 3800.741218678238 3526.070438354969 3606.4227940085575 3782.434636385494 3161.022889573453 4083.016735249621 3719.3600081000855 3844.0542103925686 3897.0557443521598 3439.4006241330335 3593.8960855929777 1.0575545670100064 0.9811275435842721 1.0034855510891916 1.0524607685648786 0.8795532242140212 1.136097604941168 1.0349102810763118 1.0696063878425455 1.0843540412797332 0.9570117060203055 1.0 11.811332979829634 -7.285840952927707 24.999035239318356 1.048848580988186 0.9977565593321215 0.15160983615791124 0.06117644059749457 1083.9732850874918 1110511.03387899 0.00835164079054136 0.013354629824395 5.17796424337274e-08 7.285840952927707 -0.051092021656064524 NVIPDT(ph)PPSTPLVPSR ddPTM_A549_PD325901_60min_R1 2 NVIPDTPPSTPLVPSR 16 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 NVIPDT(0.937)PPS(0.031)T(0.031)PLVPS(0.001)R;NVIPDT(0.754)PPS(0.113)T(0.113)PLVPS(0.021)R 86.539 2.6082e-05 10496800.0 5845.9 6625.2 6297.7 5578.299999999999 7052.4 6276.0 6504.3 7653.6 6561.9 7150.200000000001 7691.2 True False 6439.371464475877 7183.5288551414205 6725.099793146549 5922.858921761505 6557.063753459202 6224.890336801171 6751.824695789528 7500.942943866949 6286.12616262193 6698.735151739236 6745.231158533837 0.9546554170095422 1.0649788993595963 0.9970154669404001 0.8780809408241119 0.9721036387557198 0.9228579703937427 1.0009775109408 1.1120364547295034 0.9319363584254541 0.99310683270865 1.0 12.719652169726809 -6.006340221190762 24.946740756759656 0.9709671726331084 1.0151121668917542 0.039457865145004045 0.060859738442277024 570.5851700894938 2245108.1139055504 0.008391434171476978 0.024923838831188958 9.855071484381098e-07 6.006340221190762 0.04414499425864582 NVIVIPK ddPTM_A549_MK2206_60min_R1 2 NVIVIPK 7 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 112.75 0.021439 54348000.0 5395.4 7500.9 8497.199999999999 7248.5 10649.7 8461.5 7696.400000000001 8122.9 10842.0 8202.6 8216.0 False True 6306.011615134708 7882.663771065711 9702.230731438818 9024.38282539753 9083.143237572289 9356.89031371088 9094.736256184759 9274.345950337949 8386.304311116299 6349.626963046884 6175.740449935557 1.0210940155686936 1.2763916869511518 1.5710230716609956 1.4612632928075366 1.4707780081118969 1.515104203222873 1.472655194937744 1.5017382977023792 1.3579431291034598 1.0281563829505078 1.0 12.59239640587894 -10.240482316806126 0.7603959750784334 1.008943132467583 1.4192625576618714 0.515405798223435 0.14513472670962219 0.3941559971123909 0.43433649150607734 0.08662383381770856 0.030459553983594984 5.748012225841214e-11 10.240482316806126 0.4103194251942883 NVIVIPK ddPTM_A549_PD325901_60min_R1 2 NVIVIPK 7 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 126.24 0.016352000000000002 119419000.0 11512.9 10736.3 12641.4 12961.9 14648.4 13251.400000000001 12748.900000000001 13179.8 16251.4 12065.3 12908.9 False True 12681.68113265097 11641.08568004813 13499.321422913572 13762.52712438925 13619.54691823661 13143.48499188767 13234.06636596577 12916.918549646922 15568.410173765831 11303.494898923018 11321.187136259277 1.1201723794525338 1.0282566253820051 1.192394513087608 1.2156434620103485 1.2030140262072155 1.1609634955853678 1.1689645446792378 1.140950890942953 1.3751570384260878 0.998437245394558 1.0 13.466737626217094 -5.773368816842512 24.682161328250444 1.1814692719261979 1.0742145054388175 0.07446846248446626 0.10096851107444749 305.06418482913983 631187.7314915537 0.017739743290391553 0.05580633660116913 1.685121358308849e-06 5.773368816842512 -0.10725476648738042 NVKNS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 NVKNSPQK 8 1 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BU05 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 NVKNS(1)PQK;NVKNS(1)PQK 45.973 0.012374 9818100.0 4761.4 4097.5 3241.6 3921.9 4191.5 3256.4 2581.4 3105.7 3798.8 3793.0 5016.200000000001 True False 5244.77382284258 4442.810705177503 3461.5944693243337 4164.146855718852 3897.1034998900027 3229.880958055979 2679.6365895962826 3043.7543771254827 3639.14964668285 3553.509332682572 4399.239200311708 1.192200192813103 1.009904327289752 0.7868620713052071 0.9465606815432543 0.885858513811632 0.7341908023158017 0.6091136370594299 0.691881991074688 0.8272224993869389 0.8077554256269557 1.0 12.103038331857253 -5.455056794590438 3.0277884305758884 0.8621101970808197 1.1926817411806099 0.466545336988355 0.11583703187180698 0.25323106907900084 4.00716587687336 0.019446136714765413 0.15689385800905276 3.5070600759380098e-06 5.455056794590438 0.33057154409979017 NVKPSQT(ph)PQPK ddPTM_A549_MK2206_60min_R1 1 NVKPSQTPQPK 11 1 Q96HR9-2 Q96HR9-2 1 NVKPS(0.095)QT(0.905)PQPK 52.555 0.0089067 1735400.0 1176.9 1127.6 1182.7 1015.0 1970.9 1315.8 1374.6 1525.3 2306.9 1826.2 2008.7 True False 1375.5319475575554 1184.9900236309902 1350.4246441266177 1263.675045565081 1680.983220835442 1455.0370826426488 1624.3470268893982 1741.5159460353416 1784.3908333623135 1413.6601516490164 1509.8843527002875 0.9110180823435547 0.7848217126773623 0.8943894555311531 0.8369349899580825 1.1133191875451653 0.9636745225158804 1.0758089015124932 1.1534101555001894 1.1818062954100403 0.9362704826504208 1.0 10.560222337407675 -6.759683862796603 24.999099014649072 1.0843085676122657 0.8543359577720016 0.5969691980432579 0.07904122709614933 22.349962609118645 318260.73846464924 0.011714312533334496 0.02342671540411725 1.739066291523198e-07 6.759683862796603 -0.22997260984026413 NVKS(ph)LEK ddPTM_A549_MK2206_60min_R1 1 NVKSLEK 7 1 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 1 NVKS(1)LEK 44.309 0.050476 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NVKS(ph)LEK ddPTM_A549_PD325901_60min_R1 1 NVKSLEK 7 1 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 1 NVKS(1)LEK 42.336000000000006 0.027576999999999997 3607800.0 1873.4 1602.1 2338.4 2054.7 2788.7 2541.5 2269.8 2219.9 2380.4 2338.3 2614.8 True False 2063.5861888758127 1737.1145895704385 2497.0978859415163 2181.614152437728 2592.831332492725 2520.8028666316386 2356.1784810822187 2175.62235302214 2280.3600660639827 2190.659338943227 2293.1961765828814 0.8998733775802761 0.7575080611545992 1.0889159468521665 0.9513421375438437 1.130662679002166 1.0992530392179167 1.0274648567542912 0.9487292780437392 0.9944025240186708 0.9552864954657103 1.0 11.163144063425975 -5.760597798762032 24.999990450912087 1.0132633551289854 0.8286907046165869 0.5512884729121827 0.06682927564515488 11.314448493859066 336045.6347028398 0.008635865445558152 0.02998829589159491 1.7354104218428068e-06 5.760597798762032 -0.18457265051239846 NVLLNSLQKEDKS(ph)PETGTAGGSSTASYSAGR ddPTM_A549_MK2206_60min_R1 1 NVLLNSLQKEDKSPETGTAGGSSTASYSAGR 31 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 NVLLNSLQKEDKS(0.999)PET(0.001)GTAGGSSTASYSAGR 118.8 1.5282999999999999e-21 10392000.0 1065.4 1615.7 1723.0 1364.7 1869.3 1820.3 1348.3 1908.7 2337.6 2265.7 2656.1 True False 1245.2134734708306 1697.9322287873276 1967.3473085568282 1699.0515612637103 1594.3284462467361 2012.9229377826532 1593.268657322111 2179.2640701485957 1808.1373323801386 1753.8767964030098 1996.5170653692592 0.6236928774964047 0.8504471402919325 0.9853896781958956 0.8510077828708505 0.7985548803470219 1.008217246272503 0.7980240614810038 1.0915329039501784 0.9056458187827814 0.878468221897531 1.0 10.96326968822252 -4.78033802679274 1.2751065924826732 0.9428318467038536 2.2103999075636875e-07 0.46885951137889204 0.08979631762383472 2.3842427361921734 1.415614095879408 0.012268831844424719 3.969414512079154 1.6582956946720373e-05 4.78033802679274 -0.9428316256638628 NVLLNSLQKEDKS(ph)PETGTAGGSSTASYSAGR ddPTM_A549_PD325901_60min_R1 2 NVLLNSLQKEDKSPETGTAGGSSTASYSAGR 31 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 NVLLNS(0.001)LQKEDKS(0.786)PET(0.191)GT(0.02)AGGS(0.001)S(0.001)TASYSAGR;NVLLNSLQKEDKS(1)PETGTAGGSSTASYSAGR 128.38 2.5534e-28 44399000.0 3613.8999999999996 3785.0 4472.3 5039.8 5460.799999999999 4771.4 5334.6 5422.9 5898.700000000001 4616.5 4854.8 True False 3980.780467587432 4103.975233458656 4775.817172124638 5351.0969997837465 5077.252246737285 4732.54330035263 5537.611122205132 5314.73600531725 5650.798152281804 4325.013402143183 4257.690377112811 0.93496241271702 0.9638970591942406 1.121691985353612 1.2568074532964013 1.1924897766239706 1.1115282890912848 1.3006138614429381 1.248267378456306 1.3271979998023424 1.0158120997694589 1.0 12.055855324249055 -5.810772369764502 3.348792884495904 1.1801309004922358 0.9407153820221297 0.43703772078130254 0.10060773849319946 0.2017604037157185 4.52805979376998 0.01756569395255435 0.06933742977456062 1.5460645783834395e-06 5.810772369764502 -0.23941551847010611 NVNS(ph)LKEDEELVK ddPTM_A549_MK2206_60min_R1 3 NVNSLKEDEELVK 13 1 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NVNS(1)LKEDEELVK;NVNS(1)LKEDEELVK;NVNS(1)LKEDEELVK 168.09 3.9565000000000003e-22 117628000.0 28253.0 30803.0 30581.0 27985.0 40211.0 30849.0 28264.0 32665.0 44401.0 40544.0 36359.0 True False 33021.415680468715 32370.74112974936 34917.845643050685 34841.32625629437 34296.01516718959 34113.420704091106 33399.202944858094 37295.36378236703 34344.24439382725 31385.082240969085 27330.056842649345 1.2082454079984877 1.18443738760301 1.2776353098746716 1.2748354844957173 1.254882687022797 1.2482016009149357 1.2220685502833522 1.3646281087921681 1.256647382461059 1.1483723733787394 1.0 14.738200840015145 -10.540219308275043 0.8217899657690841 0.9978999191554616 1.2552382716505524 0.5206353602776319 0.06104168569767955 0.21322554536257624 0.2556216613144088 0.03326415026546891 0.009113607048705195 2.8825755041887306e-11 10.540219308275043 0.25733835249509074 NVNS(ph)LKEDEELVK ddPTM_A549_PD325901_60min_R1 3 NVNSLKEDEELVK 13 1 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NVNS(1)LKEDEELVK;NVNS(1)LKEDEELVK;NVNS(1)LKEDEELVK 164.2 7.312399999999999e-29 204494000.0 41068.0 40001.0 47423.0 45167.0 56525.0 46159.0 51924.0 52923.0 48798.0 48526.0 52501.0 True False 45237.193127336315 43372.02465352172 50641.409957665346 47956.86300830039 52554.879000663816 45783.09640796768 53899.99623390303 51867.40924770969 46747.18975961611 45462.06007850101 46043.709831259715 0.9824836724304121 0.9419750235693617 1.0998551190435177 1.0415508043129444 1.1414127834891266 0.9943398691320241 1.1706267030053599 1.1264819763175595 1.015278524057564 0.9873674437856913 1.0 15.490716458448315 -4.25207977768952 16.145940820734353 1.0336387289052715 1.0456709096051242 0.0 0.07362139006683839 0.0 0.0 0.009758753482778099 0.0 5.5965478631164654e-05 4.25207977768952 0.01203218069985268 NVNS(ph)LKEDEELVKGQK ddPTM_A549_PD325901_60min_R1 2 NVNSLKEDEELVKGQK 16 2 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 NVNS(1)LKEDEELVKGQK;NVNS(1)LKEDEELVKGQK 57.00899999999999 0.0019401 10973700.0 2988.5 2873.9 3071.0 3406.5 4014.7000000000003 4985.9 3782.4 5280.6 4521.5 5674.299999999999 4317.1 True False 3291.8903199825772 3116.093638952929 3279.4165274231955 3616.91176827718 3732.7213219631167 4945.296483469878 3926.3413018086976 5175.274290449442 4331.477078939795 5316.0237296179 3786.1240683516753 0.869461819146284 0.8230299859955592 0.8661672116970325 0.955307249044228 0.9858951409345104 1.3061633465230997 1.037034505717629 1.3669056261810633 1.144039920705912 1.4040806993238024 1.0 11.8865059724768 -6.719310760352423 2.0887328927173168 1.1068049096201595 0.8544429564748242 0.48272144564025643 0.14219642343926694 0.21911015912577259 1.9438016877512567 0.01791115398307046 0.04196310943292918 1.9084871477714213e-07 6.719310760352423 -0.2523619531453354 NVPHEDICEDS(ph)DIDGDYR ddPTM_A549_MK2206_60min_R1 4 NVPHEDICEDSDIDGDYR 18 0 O00629 O00629 KPNA4 Importin subunit alpha-3 1 NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR 222.57 1.9521999999999996e-64 174440000.0 4448.96 5507.0 5002.889999999999 4204.88 7520.300000000001 6700.299999999999 5634.4 6126.2 7010.5 6587.9 5688.8 True False 5199.835681371112 5787.2827777011935 5712.375029893136 5235.075788764236 6414.073832081168 7409.321298700818 6658.097547145073 6994.607610700653 5422.632943468068 5099.68881450474 4276.113957107279 1.216018968046566 1.3533976960745442 1.3358799805600747 1.224260120585205 1.4999772916295673 1.7327230688943338 1.5570439922628176 1.635739290594676 1.2681217100061548 1.1925989030363904 1.0 12.062084585607032 -9.530636639540097 1.187396713300441 1.0597274868918598 1.4399354042292403 0.3754199002608344 0.1649063357359691 0.265332816179528 0.772967286640286 0.04653120370378615 0.03482271194235396 2.946886169127931e-10 9.530636639540097 0.38020791733738046 NVPHEDICEDS(ph)DIDGDYR ddPTM_A549_PD325901_60min_R1 4 NVPHEDICEDSDIDGDYR 18 0 O00629 O00629 KPNA4 Importin subunit alpha-3 1 NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR 212.05 5.626599999999999e-56 228114000.0 3732.8 3933.78 4315.76 4158.42 4295.969999999999 3199.26 4303.8 4318.0 3022.4300000000003 3684.83 4291.9 True False 4111.751108057878 4265.293446202113 4608.653426373145 4415.2761589429565 3994.235887491937 3173.206287271274 4467.583464129728 4231.874102594528 2895.407777883447 3452.169204942977 3764.023508595713 1.0923818883352021 1.133173965694336 1.2243954948338107 1.1730203461429 1.06116124895886 0.843035724942945 1.186916992927204 1.124295343249161 0.7692321185750697 0.9171486833329894 1.0 11.878059923256842 -7.720575588557534 0.7307113099394833 0.9026470742228129 1.152835334630691 0.29274437742351955 0.11904371379105672 0.549061742706366 0.5915486327375035 0.02900272726897468 0.05601122791149066 1.9029370043058705e-08 7.720575588557534 0.2501882604078781 NVPNWHR ddPTM_A549_MK2206_60min_R1 2 NVPNWHR 7 0 B4DV51;B5MDF5;J3KQE5;P62826;F5H018 B4DV51;B5MDF5 RAN GTP-binding nuclear protein Ran 0 ; 113.25 0.0081653 5779000.0 282.78999999999996 370.07 290.58000000000004 426.38 505.15 478.94000000000005 420.98 410.36 433.913 518.09 426.86 False True 330.5180384482974 388.9049823032286 331.78861341871334 530.8431191409258 430.8431041681584 529.6211129053584 497.4666167466162 468.52978667479323 335.6323983166766 401.05310917086825 320.8588812633268 1.0301040667689774 1.2120748559989425 1.034063985115053 1.6544442125174221 1.342780671900954 1.6506356651873437 1.5504218389964046 1.460236303355661 1.0460436594280376 1.2499361326443277 1.0 8.325795106853374 -8.786023930444168 11.505091608512398 1.0216608453445912 1.3749466500745369 0.21435455957914895 0.214908139831897 0.487239941308335 225.65961615919443 0.03662107458065503 0.039141594532059086 1.636726332238519e-09 8.786023930444168 0.35328580472994564 NVPNWHR ddPTM_A549_PD325901_60min_R1 1 NVPNWHR 7 0 B4DV51;B5MDF5;J3KQE5;P62826;F5H018 B4DV51;B5MDF5 RAN GTP-binding nuclear protein Ran 0 99.919 0.012175 3866400.0 283.76 86.85700000000001 113.29 280.73 178.29 279.53 250.7 180.55 352.95 128.02 270.44 False True 312.5671063069289 94.17674421466806 120.97854066811263 298.0700545159113 165.7675254671093 277.253600357876 260.240525688304 176.94878861126503 338.11673891668715 119.93679535197009 237.17759446040796 1.3178610189467357 0.3970726848331746 0.5100757554411725 1.2567378263281446 0.6989173064354561 1.1689704543493795 1.0972390806153738 0.7460603056280811 1.4255846539211314 0.5056834968953661 1.0 7.8898239185135814 -7.237745980800111 0.8362224880007899 1.1742935216009718 0.764951519868238 0.0 0.36595329667309384 0.7172148646690738 0.9809505121668429 0.055874055104947556 0.14293716402715345 5.78434275164823e-08 7.237745980800111 -0.40934200173273383 NVPPGLDEYNPFSDS(ph)RTPPPGGVK ddPTM_A549_MK2206_60min_R1 1 NVPPGLDEYNPFSDSRTPPPGGVK 24 1 A0A087WZA6;O15126-2;O15126 A0A087WZA6 SCAMP1 Secretory carrier-associated membrane protein 1 1 NVPPGLDEYNPFS(0.119)DS(0.564)RT(0.317)PPPGGVK 98.32600000000001 1.4851e-08 11908000.0 1656.2 2510.0 2454.9 2149.8 3419.5 3653.2 2490.7 2841.9 4528.9 4196.8 3511.3 True False 1935.7260697976253 2637.7482789231854 2803.041734054647 2676.5010965081897 2916.4960797842605 4039.7791992021002 2943.227949856992 3244.748027953738 3503.1113811671858 3248.7399651958117 2639.347303049992 0.7334108957774249 0.9993941592586322 1.0620207999210607 1.014076886893689 1.1050065584070725 1.5305978089862553 1.1151347708033117 1.229375165672268 1.3272642736782083 1.230887637046331 1.0 11.365965487323443 -4.857448610496126 0.7733370081664477 1.180339359274797 0.19606295816768624 0.5069759022425874 0.1386596109265188 3.363611656344375 0.9374158980846645 0.025727801033430756 3.302589977904056 1.3885176016990881e-05 4.857448610496126 -0.9842764011071108 NVPPGLDEYNPFSDS(ph)RTPPPGGVK ddPTM_A549_PD325901_60min_R1 1 NVPPGLDEYNPFSDSRTPPPGGVK 24 1 A0A087WZA6;O15126-2;O15126 A0A087WZA6 SCAMP1 Secretory carrier-associated membrane protein 1 1 NVPPGLDEYNPFS(0.031)DS(0.659)RT(0.31)PPPGGVK 151.31 8.102e-29 20862000.0 4039.6 4750.7 4966.9 4958.1 5115.5 5505.4 5686.1 5865.7 5649.6 5444.7 4796.3 True False 4449.697218203654 5151.058161583101 5303.983702396049 5264.350576337908 4756.204927516952 5460.565847709549 5902.487647053312 5748.70401194737 5412.166959013225 5100.920712801688 4206.385506250756 1.0578434172501148 1.2245806177128904 1.2609361872596423 1.251514053696457 1.1307106589372646 1.2981610552801357 1.4032208028204074 1.3666612352587997 1.286655003677304 1.2126612516189108 1.0 12.038365360711241 -10.652714794379765 0.9735895584178754 1.0033405045312724 1.257454408511035 0.11653970537754654 0.10996392700400544 0.3631598389256795 0.6248779901116733 0.061863314265529955 0.017433938743676547 2.2247704404821807e-11 10.652714794379765 0.25411390397976263 NVPPGLDEYNPFSDSRT(ph)PPPGGVK ddPTM_A549_MK2206_60min_R1 1 NVPPGLDEYNPFSDSRTPPPGGVK 24 1 A0A087WZA6;O15126-2;O15126 A0A087WZA6 SCAMP1 Secretory carrier-associated membrane protein 1 1 NVPPGLDEYNPFS(0.022)DS(0.075)RT(0.904)PPPGGVK 98.84 1.541e-08 11202000.0 2159.3 2519.2 3045.0 2619.0 3966.0 2980.1 2891.8 3137.7 4027.8 3729.1 3980.9 True False 2523.7370501835585 2647.4165196268104 3476.826787321846 3260.6551175713794 3382.6066537284332 3295.452203969718 3417.2026279344987 3582.4785838032453 3115.509731074916 2886.69372002757 2992.332662749327 0.8434012306187818 0.8847333562152776 1.161911852450045 1.0896699949715885 1.1304246669621707 1.1012987442852986 1.1419862071066675 1.1972193561232252 1.0411642294518202 0.9646967918918825 1.0 11.54705485568322 -5.6530290441440165 6.612261857208587 1.0643182244643419 0.855026682669014 0.5903344133966836 0.07042669518533162 0.1257948334427115 6.78937099540036 0.01084323725624388 0.042868790960058537 2.2231612081878982e-06 5.6530290441440165 -0.20929154179532783 NVPPGLDEYNPFSDSRT(ph)PPPGGVK ddPTM_A549_PD325901_60min_R1 1 NVPPGLDEYNPFSDSRTPPPGGVK 24 1 A0A087WZA6;O15126-2;O15126 A0A087WZA6 SCAMP1 Secretory carrier-associated membrane protein 1 1 NVPPGLDEYNPFS(0.007)DS(0.206)RT(0.787)PPPGGVK 164.62 2.0062e-34 18546000.0 5618.7 5990.9 6308.7 7457.2 7486.5 6944.6 7316.6 7449.5 7131.2 7566.4 7764.6 True False 6189.106287731678 6495.774168065382 6736.84631929492 7917.814307470002 6960.674067022908 6888.045480074792 7595.037216797144 7300.913878480307 6831.500463416011 7088.6562127101 6809.603423854767 0.9088791082973464 0.9539137250357329 0.9893155151583467 1.1627423529148635 1.0221849399685927 1.0115193281219923 1.1153420756032455 1.0721496427977621 1.0032156115706439 1.0409793010673398 1.0 12.733355065998145 -5.747776879186717 3.0509656602767032 1.026675038042413 0.9220783050121976 0.3855705824008254 0.05322167811547174 0.23408603906721454 4.3401881730649885 0.0079850298166796 0.03591328341617703 1.787405626972749e-06 5.747776879186717 -0.10459673303021544 NVPPPSIEPLT(ph)PPPQYDEVQEK ddPTM_A549_PD325901_60min_R1 1 NVPPPSIEPLTPPPQYDEVQEK 22 0 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 NVPPPS(0.026)IEPLT(0.972)PPPQY(0.002)DEVQEK 50.144 0.0099212 2607500.0 1550.3 1565.8 1584.5 1861.8 1912.0 1780.0 1590.2 1532.3 1707.1 1390.5 1484.2 True False 1707.6853147294605 1697.7554611755784 1692.0336983725335 1976.7991575454143 1777.7077160419142 1765.5042701571192 1650.71593119083 1501.7370744339046 1635.3565236001612 1302.7035926957853 1301.6528091189816 1.3119361036721462 1.3043074537861576 1.299911686525518 1.5186838945812307 1.365731094795661 1.3563557484672841 1.2681691458939117 1.1537155406673683 1.2563692193059113 1.0008072687044058 1.0 10.3461289732902 -10.258459282411243 0.31670470046701205 0.9077216469373666 1.3733089554860876 0.7648367653025792 0.0715908912312977 1.010332665158629 0.16484424011390847 0.1700574196818998 0.03902540818274375 5.514939056622491e-11 10.258459282411243 0.465587308548721 NVPQEESLEDS(ph)DVDADFK ddPTM_A549_MK2206_60min_R1 2 NVPQEESLEDSDVDADFK 18 0 O00505 O00505 KPNA3 Importin subunit alpha-4 1 NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK 237.31 2.4594e-74 32138000.0 3752.1 4243.5 4271.2 3608.7 6872.0 4598.2 5083.1 5823.9 7489.8 6206.9 5174.0 True False 4385.362749962364 4459.47602454603 4876.920385553059 4492.8316620007 5861.137903283351 5084.778471961869 6006.633473287865 6649.455659945727 5793.372258752895 4804.7569791207325 3889.1530048644795 1.1275881263805345 1.1466445313332239 1.253980077269549 1.1552211127670087 1.5070473946261178 1.3074256697028694 1.5444580004373396 1.7097439086682147 1.4896231265539446 1.2354250329341716 1.0 11.925240278245486 NVPQEESLEDS(ph)DVDADFK ddPTM_A549_PD325901_60min_R1 2 NVPQEESLEDSDVDADFK 18 0 O00505 O00505 KPNA3 Importin subunit alpha-4 1 NVPQEES(0.001)LEDS(0.999)DVDADFK;NVPQEESLEDS(1)DVDADFK 222.79 6.232999999999999e-64 266260000.0 8839.0 9973.0 10953.9 10895.2 13624.0 10869.3 11797.7 12316.0 12763.4 12437.7 12199.5 True False 9736.328773072117 10813.459710246547 11697.297525151716 11568.171759205494 12667.09724024846 10780.784024504925 12246.667929449151 12070.347718284911 12226.998683919095 11652.381499368836 10699.03883900217 0.9100190138182693 1.0106945000355796 1.093303585599718 1.0812346728787445 1.1839472153397508 1.0076404232878153 1.1446512265013253 1.1281712217254305 1.1428128141143776 1.0891054490700005 1.0 13.385193575756299 -5.412559487655615 2.3200755652882137 1.0839647704645148 0.8945456908061774 0.510829478396147 0.054230864405820964 0.3374211320134334 2.656927933843677 0.009146844423612037 0.1121001987905181 3.867590745299525e-06 5.412559487655615 -0.18941907965833737 NVRS(ph)DIS(ph)DQEEDEESEGCPVSINLSK ddPTM_A549_PD325901_60min_R1 2 NVRSDISDQEEDEESEGCPVSINLSK 26 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 NVRS(0.998)DIS(0.971)DQEEDEES(0.031)EGCPVSINLSK;NVRS(0.995)DIS(0.988)DQEEDEES(0.018)EGCPVSINLSK 139.6 2.4940000000000003e-25 85951000.0 4425.8 4630.6 5560.3 4979.9 5606.4 4930.5 5716.799999999999 6351.5 4864.200000000001 5975.5 5931.5 True False 4875.103957898245 5020.836913092115 5937.655394800127 5287.497112826513 5212.62580503002 4890.347642702067 5934.355952352994 6224.814349844643 4659.774589711151 5598.205910214792 5201.963102876457 0.93716619312477 0.9651811852175215 1.1414258958347598 1.0164426406451748 1.0020497458253148 0.9400965646984154 1.1407916271208374 1.1966279319441144 0.8957723262463165 1.0761717835175013 1.0 12.344840451054498 NVS(ph)ES(ph)PNR ddPTM_A549_MK2206_60min_R1 1 NVSESPNR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 NVS(1)ES(1)PNR 51.927 0.032469 4604600.0 473.8 465.47 420.77 492.84 511.55 406.17 353.92 522.14 502.31 841.64 549.76 True False 553.7658567021582 489.160434816883 480.4415130710718 613.5858221244283 436.3016726461873 449.150639806175 418.22268278531624 596.1549439866866 388.5375870242416 651.5129394556341 413.23941939588286 1.340060581615645 1.1837216196169995 1.162622660184336 1.4848191951809269 1.0558084542951378 1.086901729904642 1.012059022337991 1.4426381318079697 0.9402239205355747 1.5765992034547058 1.0 8.690834070924485 -8.050057492874748 0.493188693585377 0.9650429570964036 1.2725014735850801 0.0 0.24083599557295468 0.7534077391178642 0.40139527930610075 0.04918179609486895 0.08263823625655256 8.911329601506751e-09 8.050057492874748 0.3074585164886765 NVS(ph)ES(ph)PNRK ddPTM_A549_PD325901_60min_R1 2 NVSESPNRK 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK 65.842 0.0013985 40818000.0 9552.0 8857.2 9945.9 10965.900000000001 12988.599999999999 9491.7 9885.5 10112.9 10461.2 11585.0 12460.9 True False 10521.71200818926 9603.627328346098 10620.888583555306 11643.238737634145 12076.325544237454 9414.402742163109 10261.69811205316 9911.190276083418 10021.552143802941 10853.521122891536 10928.288296153296 0.962795977105843 0.878786052132842 0.9718711929748236 1.0654219967579468 1.105051881591398 0.8614709355239953 0.9390032394794369 0.9069297960936946 0.9170285292830789 0.9931583820598805 1.0 13.415779828131273 -7.284712653536786 24.995014136960847 0.9473887253157378 0.9926589554534864 0.1628651827378378 0.06542953410347448 1612.142722812971 1731404.7354435942 0.010777899047402263 0.017236587063950468 5.191434112039485e-08 7.284712653536786 0.04527023013774856 NVS(ph)ES(ph)PNRKNEK ddPTM_A549_MK2206_60min_R1 1 NVSESPNRKNEK 12 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 NVS(1)ES(1)PNRKNEK 61.732 0.0066041 34000000.0 2329.4 2667.6 2900.4 2693.1 2646.8 1891.1 2533.6 2782.2 2545.3 3707.9 3826.3 True False 2722.545771637838 2803.3694457591614 3311.720332987942 3352.9096208978526 2257.459226194758 2091.214946789415 2993.9223245504 3176.5853701301544 1968.7936140088848 2870.282814751611 2876.1241094922625 0.946602325905353 0.974703920636462 1.1514525127959716 1.165773622157689 0.7848963188842637 0.727094821773386 1.0409572781193135 1.1044674183726146 0.6845301311967537 0.9979690394022382 1.0 11.489910216449646 -6.7654406389048285 24.999400532683683 0.8685828725034404 1.0601252567620123 0.18723055338843353 0.14140528462344706 114.48425794522602 715290.5743005085 0.02339232354096467 0.045391612613316645 1.7161662665139506e-07 6.7654406389048285 0.19154238425857195 NVS(ph)ES(ph)PNRKNEK ddPTM_A549_PD325901_60min_R1 2 NVSESPNRKNEK 12 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 NVS(1)ES(1)PNRKNEK;NVS(1)ES(1)PNRKNEK 78.069 0.00084292 164181000.0 12652.2 13364.8 14578.8 14767.900000000001 17796.7 14693.1 15763.6 15920.3 16589.4 15681.0 17147.199999999997 True False 13936.642029942645 14491.098599769679 15568.205037446196 15680.07964266565 16546.72118728199 14573.444265081776 16363.492424172899 15602.75712726626 15892.205209192502 14690.898983863806 15038.203105056611 0.9267491556392422 0.9636190240639211 1.0352437009054207 1.0426830608101847 1.1003123891655737 0.9690947890031782 1.088128169958727 1.0375413218099054 1.056788839608685 0.9769052114294144 1.0 13.876344571146305 -5.638244487569951 3.087043301078823 1.0348187841943697 0.9316439998134464 0.4475780207304989 0.03892790271570769 0.15644906422204388 2.814739322875229 0.004939951105085106 0.025702401557225137 2.300146577448366e-06 5.638244487569951 -0.10317478438092331 NVS(ph)ES(ph)PNRKNEKEK ddPTM_A549_PD325901_60min_R1 1 NVSESPNRKNEKEK 14 3 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 NVS(1)ES(1)PNRKNEKEK 48.31399999999999 0.010041 23917000.0 2606.6 2494.0 2939.3 3054.8 2849.1 4021.9 3452.7 3835.5 3376.8 3281.0 3569.1 True False 2871.220113122501 2704.178132693762 3138.7785734467598 3243.4880580458303 2648.9890448614124 3989.1469798566936 3584.0943878899357 3758.997943608459 3234.884839138318 3073.8371000610387 3130.123326389002 0.9172865774700388 0.8639206352975803 1.0027651457004227 1.036217337093746 0.8462890335753512 1.2744376383593439 1.145032963293701 1.2009104919022293 1.0334688131506218 0.9820178886073166 1.0 11.61200378490775 -5.9041549351361775 3.5671247423990122 1.0456012402031454 0.8904193851159251 0.25469613051472495 0.11048229369588775 0.2632786270304046 6.469069629065444 0.015604775262830781 0.05524216727433206 1.2469385878778067e-06 5.9041549351361775 -0.15518185508722027 NVS(ph)ESPNR ddPTM_A549_PD325901_60min_R1 2 NVSESPNR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.745)ES(0.255)PNR;NVS(0.61)ES(0.39)PNR 85.355 0.0029933000000000004 13656100.0 1571.96 1414.6 1379.24 1739.35 1864.02 1538.25 1485.95 1603.8000000000002 1802.65 2057.25 1537.83 True False 1731.5442219842112 1533.8133065391314 1472.843520443885 1846.7856991495412 1733.0976657199014 1525.7230020051622 1542.4986403930407 1571.8109508432406 1726.8908893842367 1927.3548839075197 1348.6866591075625 1.2838743605056409 1.137264386936302 1.0920576032230334 1.369321544539912 1.2850261801111809 1.1312657330018718 1.1437042325411042 1.1654381988795837 1.2804240908907152 1.4290605389267117 1.0 10.39733948998262 -10.905353437501542 1.0688526950608002 0.9957253765726388 1.2114917953705528 0.0 0.15064659678733003 0.3931029350917238 0.7710710315516702 0.06560829161027511 0.014390871657658157 1.2435022129976836e-11 10.905353437501542 0.21576641879791403 NVS(ph)ESPNRKNEKEK ddPTM_A549_PD325901_60min_R1 1 NVSESPNRKNEKEK 14 3 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.538)ES(0.462)PNRKNEKEK 40.179 0.019022999999999998 7193200.0 949.38 1189.4 1336.1 1737.0 0.0 1995.7 1935.2 1556.6 1491.5 1284.5 1512.2 True False 1045.7603587033836 1289.6349121996632 1426.7757806219893 1844.2905449867767 0.0 1979.4476808722256 2008.845094982073 1525.5523918709223 1428.8174418309657 1203.3964507858586 1326.208986625607 0.7885336091442164 0.9724220882268318 1.0758302763822039 1.390648505315419 0.0 1.492560901663555 1.51472740362992 1.150310703106094 1.0773697480865627 0.9073957897448491 1.0 10.373092420754618 NVS(ph)SYEK ddPTM_A549_MK2206_60min_R1 4 NVSSYEK 7 0 A0A0U1RR22;Q9UNF0 A0A0U1RR22 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 1 NVS(0.896)S(0.104)YEK;NVS(0.499)S(0.499)Y(0.001)EK;NVS(0.5)S(0.5)YEK;NVS(0.5)S(0.5)YEK 105.52 0.0097868 63893000.0 22709.5 29275.6 27040.200000000004 26901.0 40963.2 32863.8 29687.699999999997 32258.0 46083.3 40251.5 40503.5 True False 26542.308406031378 30765.602993802237 30874.90696044015 33491.74620763177 34937.56754362292 36341.42550277511 35081.570806186806 36830.67028598177 35645.50612990829 31158.658194119147 30445.363110268376 0.8718013416328543 1.0105185108935637 1.014108678836118 1.1000606590346735 1.1475497078843986 1.193660439231817 1.1522795993309984 1.2097300384490999 1.170802463442653 1.0234286935999852 1.0 14.893934899069688 -5.4105696442369995 1.1265362052708048 1.1100516850991775 0.8071241625905954 0.5743633484676411 0.06532442898591691 0.9688716442150436 1.174668186178786 0.012373114347496869 0.32363524885552 3.885351867634691e-06 5.4105696442369995 -0.3029275225085821 NVS(ph)SYEK ddPTM_A549_PD325901_60min_R1 3 NVSSYEK 7 0 A0A0U1RR22;Q9UNF0 A0A0U1RR22 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 1 NVS(0.563)S(0.436)Y(0.001)EK;NVS(0.9)S(0.1)YEK;NVS(0.905)S(0.094)Y(0.001)EK 63.733999999999995 0.029521 22049700.0 9469.8 11259.2 12619.3 13030.2 14991.8 13218.6 12913.8 13271.3 14701.0 13798.8 15477.900000000001 True False 10431.167124701691 12208.052298165832 13475.721584015479 13835.045860268685 13938.827686902294 13110.952104212867 13405.241725702508 13006.593510366562 14083.168094104602 12927.54141308206 13574.216422492049 0.7684544580722594 0.8993559494113763 0.9927439761227493 1.0192150640345214 1.0268605754514195 0.9658717450893469 0.9875517899869671 0.9581837437640265 1.0374940000786517 0.9523600486921316 1.0 13.728581299788111 -5.405545942761431 1.7835516219030525 1.0089723407686275 0.726670208964815 0.8343933509208616 0.02946489207786626 0.15520379431628079 0.6112411939651422 0.0038678968540761033 0.06659852504272475 3.9305566248247275e-06 5.405545942761431 -0.2823021318038125 NVS(ph)TGS(ph)AENEEK ddPTM_A549_MK2206_60min_R1 1 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 NVS(0.967)T(0.04)GS(0.993)AENEEK 82.55 0.00073739 4088600.0 1459.8 1515.8 783.01 1307.2 2100.3 2014.5 1940.7 2043.7 2015.2 1621.7 2014.5 True False 1706.1785513166121 1592.9477454947275 894.05259203313 1627.4640586824382 1791.3486522505873 2227.6730528831263 2293.3000691723078 2333.4007335687566 1558.7604176131306 1255.356843680435 1514.2440526284306 1.126752684519395 1.0519755667718707 0.5904283331879231 1.0747699856291197 1.1829986382585802 1.4711453210044463 1.514485109049356 1.5409674084692164 1.029398408339414 0.8290320450665676 1.0 10.564382029709344 -4.996889766705421 13.731769789910393 1.0964088362734912 1.1601060789460385 0.0 0.2802725230819526 4035350.2413832955 100184007.6361584 0.03991158011074976 4239306.19403346 1.0071872822382407e-05 4.996889766705421 0.06369724267254728 NVS(ph)TGS(ph)AENEEK ddPTM_A549_PD325901_60min_R1 1 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 NVS(0.883)T(0.412)GS(0.706)AENEEK 98.439 0.00028923 5627100.0 1612.9 1749.4 2027.7 2041.9 1698.0 1601.4 1730.8 2075.1 1765.0 1957.7 1893.5 True False 1776.6404206457757 1896.8280775198346 2165.31191555064 2168.023525508636 1578.7383377819936 1588.358729342477 1796.666541130102 2033.7105026155423 1690.8231879528346 1834.0904878968283 1660.6115038854555 1.0698711989461946 1.1422467404818561 1.3039244341522986 1.3055573326066638 0.9506969776423341 0.9564902601397598 1.0819306845257355 1.2246756678832584 1.018193107777882 1.1044669289628979 1.0 10.697498882360694 -7.398703555222474 0.4409436169034882 1.004707579793331 1.197990961901427 0.07688173098534445 0.11648764148295795 1.4362808990868479 0.5275622291174714 0.03638957584121535 0.11009953033011594 3.992973654807835e-08 7.398703555222474 0.19328338210809615 NVSAGTQDVPS(ph)PPSDYVER ddPTM_A549_MK2206_60min_R1 1 NVSAGTQDVPSPPSDYVER 19 0 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625 A0A0G2JMZ8 OCLN Occludin 1 NVSAGTQDVPS(0.616)PPS(0.384)DYVER 106.93 1.3006999999999999e-09 2776300.0 945.26 1057.2 983.63 958.34 1467.1 857.01 928.37 1076.2 1560.1 1513.3 1463.5 True False 1104.7967786118243 1111.006964333702 1123.1235247334612 1193.1333430215175 1251.2915334556187 947.6982293628026 1097.042811984076 1228.7546457242731 1206.7398409677685 1171.4444789675051 1100.0725594548069 1.004294461412035 1.0099397124170737 1.0209540407862534 1.0845951321727645 1.1374627270729811 0.8614870184858346 0.99724586578886 1.11697599868616 1.0969638598801388 1.0648792835520504 1.0 10.103382969969497 NVSAGTQDVPSPPS(ph)DYVER ddPTM_A549_MK2206_60min_R1 1 NVSAGTQDVPSPPSDYVER 19 0 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625 A0A0G2JMZ8 OCLN Occludin 1 NVSAGTQDVPS(0.247)PPS(0.753)DYVER 109.72 7.6293e-10 2538100.0 748.07 1063.9 684.21 594.49 1290.2 965.85 693.18 927.23 1360.3 879.08 1150.5 True False 874.3259274444566 1118.047965715689 781.2412663886637 740.1400766876704 1100.4132891176046 1068.055605920658 819.1218333327462 1058.6676920227812 1052.1942219527298 680.4952174524246 864.799097815343 1.011016234467844 1.2928412720828502 0.9033789100407675 0.855852045356446 1.2724496266213396 1.2350332101626633 0.9471816464679638 1.2241776092241416 1.2166920902331937 0.7868824321989846 1.0 9.756221207784835 -6.769380659727884 24.998611740334585 1.1219879893271911 1.0275346765001454 0.03596841008063845 0.1727093387900868 371.7147949157509 1170136.1229668483 0.021749272701063378 0.041634081923860915 1.7006672177085825e-07 6.769380659727884 -0.09445331282704572 NVSES(ph)PNR ddPTM_A549_MK2206_60min_R1 2 NVSESPNR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.032)ES(0.968)PNR;NVS(0.018)ES(0.982)PNR 74.84100000000001 0.0049503 112313000.0 2778.6000000000004 2711.5 2454.1 2110.66 2849.1 1975.03 2681.39 2405.14 2852.4 3594.3 3921.9 True False 3247.559749752253 2849.503768247099 2802.128282025138 2627.7717947511283 2430.001164179948 2184.02636368119 3168.5638545256534 2746.0759604323343 2206.335954346813 2782.3451336502358 2947.9839910664887 1.101620551398377 0.9665940442289299 0.9505235749300712 0.8913792621378797 0.8242925238209483 0.740854214371455 1.0748239692371484 0.9315097940673992 0.7484219592212337 0.94381283686811 1.0 11.525512974606706 -5.227026764713283 1.1674320215031437 0.8834578162849881 1.2116835849169112 0.2774269590288524 0.09535047715979528 1.8705128013702563 1.9561938605831002 0.016587774680488637 0.7597499487968091 5.928887848863592e-06 5.227026764713283 0.3282257686319231 NVSES(ph)PNR ddPTM_A549_PD325901_60min_R1 2 NVSESPNR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.001)ES(0.999)PNR;NVS(0.009)ES(0.991)PNR 120.09 0.0012085999999999998 130949000.0 5388.8 5517.799999999999 4937.6 4947.7 6497.3 4649.5 5098.9 5728.6 5528.7 5042.6 5634.3 True False 5935.86700897511 5982.804370720787 5272.695228200836 5253.30819195802 6040.952062468165 4611.636013536813 5292.941429725142 5614.338579000239 5296.347965572143 4724.2093754245 4941.316818770438 1.201272297786433 1.2107712559522759 1.067062773261492 1.0631393178438648 1.2225389069408736 0.9332807797344069 1.0711601024283646 1.1362029161281895 1.0718495008158673 0.9560628368289971 1.0 12.270679843628194 -2.0000000000000004 0.187405362805346 1.0118057099739972 1.8443006541349936 0.40026618374004097 0.07343451300580837 39.83480031883722 0.4278693627245951 0.06534912092188475 9.665229508409052 0.00999999999999999 2.0000000000000004 0.8324949441609963 NVSES(ph)PNRK ddPTM_A549_MK2206_60min_R1 3 NVSESPNRK 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.005)ES(0.995)PNRK;NVS(0.022)ES(0.978)PNRK;NVS(0.007)ES(0.993)PNRK 66.056 0.004453800000000001 78757800.0 3192.24 4324.78 3695.69 2539.86 2934.55 2388.6000000000004 2835.9700000000003 2997.62 3081.55 5171.789999999999 5385.1 True False 3731.012069225194 4544.892829371085 4219.794413674046 3162.1258140186496 2502.881582374878 2641.3600665756426 3351.2290396097214 3422.5418148262343 2383.583845224169 4003.479047035848 4047.831048800874 0.921731175101902 1.1227970670162877 1.0424828415020222 0.7811901672515198 0.6183265932298062 0.6525371327832757 0.8279073407973603 0.8455248683959092 0.5888545782883601 0.9890430205138713 1.0 11.982933359737823 -6.262085854277929 23.772761045791995 0.7807167227446937 1.0383830437800055 0.38880091993840027 0.13425691635736062 25.77181308002977 947769.4423549402 0.02285063028768263 0.05623019381160398 5.469078357573737e-07 6.262085854277929 0.25766632103531173 NVSES(ph)PNRK ddPTM_A549_PD325901_60min_R1 4 NVSESPNRK 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.226)ES(0.774)PNRK;NVS(0.156)ES(0.844)PNRK;NVS(0.043)ES(0.957)PNRK;NVS(0.011)ES(0.989)PNRK 97.911 0.00035529 221196000.0 22182.899999999998 22612.2 23560.8 23187.5 28269.399999999998 20686.300000000003 20394.0 20933.0 24648.5 23991.3 23187.399999999998 True False 24434.891677812124 24517.809451522797 25159.777570599937 24619.739212366658 26283.854868135608 20517.83763132091 21170.104830025022 20515.47489337917 23612.609262467682 22476.485223619125 20335.496797039126 1.2015881353520645 1.2056656248050266 1.2372344684622227 1.2106780305436808 1.2925110770818526 1.0089666279659482 1.041041929848865 1.0088504401016773 1.1611523189296122 1.1052833106537003 1.0 14.311712615880342 -7.263310132074809 24.999841118641115 1.0651502307527188 1.2275894528488338 0.7497808482302859 0.05020835264437883 89.2699509590737 1192962.0329772714 0.009786760950217311 0.01614502675788375 5.4536827152577244e-08 7.263310132074809 0.16243922209611505 NVSES(ph)PNRKNEK ddPTM_A549_MK2206_60min_R1 4 NVSESPNRKNEK 12 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.072)ES(0.928)PNRKNEK;NVS(0.003)ES(0.997)PNRKNEK;NVS(0.014)ES(0.986)PNRKNEK;NVS(0.044)ES(0.956)PNRKNEK 126.16 4.6028e-07 121011000.0 12034.400000000001 15767.2 16710.4 15068.7 20703.1 13697.2 12738.7 12579.5 20931.2 23074.3 21661.0 True False 14065.512507168545 16569.683132843686 19080.185992401635 18760.53217645964 17657.701415230742 15146.628612534503 15053.156897596375 14362.682648103038 16190.316620258034 17861.79960420267 16281.975886812808 0.8638701227017886 1.0176702906349284 1.1718593692215924 1.1522269967034087 1.0844937701653379 0.9302696870348609 0.9245288779593583 0.8821216016991983 0.9943705071674371 1.0970289925726646 1.0 13.990988166938184 -7.248967414370541 24.153980505566306 0.9774183352742185 1.0673399111169395 0.1780412436088391 0.09120266869624151 642.39219095255 1244094.8515162678 0.013006728176871265 0.02241625721283282 5.636799478135669e-08 7.248967414370541 0.08992157584272098 NVSES(ph)PNRKNEK ddPTM_A549_PD325901_60min_R1 4 NVSESPNRKNEK 12 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.012)ES(0.988)PNRKNEK;NVS(0.023)ES(0.977)PNRKNEK;NVS(0.046)ES(0.954)PNRKNEK;NVS(0.038)ES(0.962)PNRKNEK 106.82 2.8846999999999997e-05 215711000.0 18721.0 18585.6 20460.800000000003 20955.3 22107.9 25552.399999999998 24955.300000000003 25556.4 23872.4 22521.5 24437.7 True False 20621.542138328216 20151.87373816888 21849.392928785594 22249.661288060684 20555.11737211458 25344.309726271214 25904.98759756415 25046.657553392044 22869.126046507226 21099.488646456764 21432.017823343867 0.9621838833983761 0.9402695492451183 1.0194743728230349 1.038150559198688 0.9590845594447871 1.1825442632221992 1.2087050230682574 1.1686560621516044 1.0670542659589455 0.9844844671356651 1.0 14.38748006562024 -6.141640223337544 1.2208400837079876 1.0638888501543948 0.9470002343948993 0.27258935618818214 0.07841039906323767 0.7395596829143609 1.880910893465313 0.013291078493257509 0.07211104492984728 7.217051039371256e-07 6.141640223337544 -0.1168886157594955 NVSHNPLLLLT(ph)PQK ddPTM_A549_MK2206_60min_R1 2 NVSHNPLLLLTPQK 14 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 NVSHNPLLLLT(1)PQK;NVSHNPLLLLT(1)PQK 89.26100000000001 6.527699999999999e-05 9637200.0 1701.1799999999998 2164.65 1750.41 1840.42 2949.7 1860.24 2124.28 2066.42 2823.3 2932.3 2378.14 True False 1988.297594142206 2274.821439032302 1998.6444587179094 2291.3229826195943 2515.8030374439627 2057.089362072627 2510.2341788742997 2359.3413631458384 2183.8270578836605 2269.891393429205 1787.5822046749931 1.112283166022961 1.2725688547822032 1.1180713555387458 1.2818000630276962 1.407377535346057 1.1507663013722123 1.4042622332608723 1.3198505539916128 1.2216652482735528 1.269810914145849 1.0 10.803793872595069 -10.227547506849811 0.8082072698229732 1.00941830297264 1.25887805886934 0.0 0.1231045537040173 0.3748312783002833 0.47319511839789374 0.050615542421700896 0.01899481302262075 5.921783057984245e-11 10.227547506849811 0.2494597558967 NVSHNPLLLLT(ph)PQK ddPTM_A549_PD325901_60min_R1 2 NVSHNPLLLLTPQK 14 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 NVSHNPLLLLT(1)PQK;NVSHNPLLLLT(1)PQK 99.044 3.2431e-05 17377500.0 3065.4 3357.3 2885.5 3379.8 4084.2 3301.0 3027.0 4060.9 4259.9 3617.7 3916.5 True False 3376.5971513717923 3640.231453445374 3081.327381921077 3588.562569917279 3797.3398817250977 3274.117750443062 3142.194141437958 3979.90216378558 4080.8712172012947 3389.2778045994537 3434.7953287390487 0.983056289590151 1.0598102958238689 0.8970919915197004 1.0447675120236872 1.1055505549202966 0.9532206251267457 0.9148126280326264 1.1587014022307542 1.1880973468947356 0.9867481116680379 1.0 11.746008419510273 -8.268763996802775 24.964964046791156 1.096546410040772 0.9975142561652075 0.21701764955715075 0.08005813748763173 660.0486352993124 2249684.673733676 0.014760667439740088 0.0180342170546433 5.385623671962028e-09 8.268763996802775 -0.09903215387556452 NVSS(ph)FPDDATSPLQENR ddPTM_A549_MK2206_60min_R1 2 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVS(0.136)S(0.864)FPDDATSPLQENR;NVS(0.004)S(0.977)FPDDAT(0.018)S(0.001)PLQENR 163.56 1.4267e-22 15501300.0 4148.2 5254.200000000001 5445.200000000001 4463.7 8027.299999999999 5713.299999999999 5751.2 5986.7 7987.7 7886.9 7077.599999999999 True False 4848.314746247135 5521.6163374972975 6217.41123885876 5557.306700383105 6846.494803700008 6317.877613818393 6796.118595261389 6835.333058499816 6178.49870373581 6105.24381231006 5320.036588177205 0.9113310906585899 1.0378906697311192 1.1686782855358182 1.0445993384205643 1.2869262626717781 1.1875628126052187 1.2774571156830956 1.2848282046950723 1.1613639495386887 1.147594327805533 1.0 12.377220452456276 -5.416934323782825 2.6643675545191625 1.1289491000870178 0.8998625315497759 0.3468493837609614 0.09636125076419286 0.3970930403533291 4.430823152767002 0.01649125040150345 0.16908050543752284 3.828826403963678e-06 5.416934323782825 -0.22908656853724185 NVSS(ph)FPDDATSPLQENR ddPTM_A549_PD325901_60min_R1 1 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVS(0.126)S(0.873)FPDDAT(0.001)SPLQENR 84.085 0.00012003 16467000.0 5042.8 4807.9 5021.9 5073.8 6986.2 4807.1 5413.3 5542.2 5152.6 5174.9 5899.9 True False 5554.741343686846 5213.078606326519 5362.716333137914 5387.197102564141 6495.513413081607 4767.952571388926 5619.306093771423 5431.656473228211 4936.054140649165 4848.155930846042 5174.249702547553 1.0735356163719654 1.0075042578172924 1.0364239535052917 1.0411552229324654 1.2553536814977304 0.921477092425867 1.0860137057175159 1.04974765144286 0.9539651977404352 0.9369775734748638 1.0 12.337133962947293 -8.695053637596939 6.786489751157786 0.9783176275349981 1.0591114520038476 0.22868948927381572 0.07669913296292269 0.25279932914785674 20.751862560151753 0.012219988181147069 0.013824309664331291 2.0181171004720963e-09 8.695053637596939 0.08079382446884953 NVSS(ph)YEK ddPTM_A549_PD325901_60min_R1 2 NVSSYEK 7 0 A0A0U1RR22;Q9UNF0 A0A0U1RR22 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 1 NVS(0.063)S(0.937)YEK;NVS(0.114)S(0.886)YEK 128.27 0.0057631 42071000.0 12384.3 13728.1 12803.2 15684.4 16952.9 17531.4 14377.8 17221.7 15513.7 15450.300000000001 16267.4 True False 13641.545019160194 14885.015165771134 13672.102143896016 16653.189766143136 15762.186788330022 17388.63009091715 14924.95504683404 16878.199683337716 14861.713139344985 14474.7654212353 14266.612927544893 0.9561866638171794 1.0433461145519884 0.9583285264226212 1.1672840533852589 1.1048303383837932 1.218833803035653 1.0461456494707353 1.1830558359616368 1.0417127887903315 1.0145901830201423 1.0 13.80035524115725 -4.149954024658799 13.874718172673056 1.0515689334174567 1.0690291448851341 0.0 0.08712875137008268 0.0 0.0 0.011705073315518845 0.0 7.080207330035867e-05 4.149954024658799 0.0174602114676774 NVSSFPDDAT(ph)SPLQENR ddPTM_A549_MK2206_60min_R1 1 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSS(0.001)FPDDAT(0.5)S(0.5)PLQENR 58.09 0.030083 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NVSSFPDDATS(ph)PLQENR ddPTM_A549_MK2206_60min_R1 2 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSSFPDDATS(1)PLQENR;NVSSFPDDAT(0.226)S(0.774)PLQENR 382.07 2.778399999999998e-274 371620000.0 31642.0 45091.0 46937.0 44351.0 67585.0 53831.0 49328.0 51821.0 73292.0 66076.0 64710.0 True False 36982.39602737375 47385.93930076707 53593.37238637951 55216.99699099206 57643.33602930818 59527.36068987414 58290.259088025734 59166.78544515663 56691.47902327394 51149.385708224996 48640.721094855166 0.7603175938788755 0.9742030593740352 1.1018210910538535 1.1352010362533973 1.185083911829696 1.2238173972336623 1.1983839420133766 1.2164043647661882 1.1655147733669253 1.0515753993136252 1.0 15.569876996329718 -5.362533722703675 1.8692905647846558 1.1195464209138428 0.6896138282598197 0.7307890907001848 0.06893859408777635 0.359224712997968 1.501369492109764 0.01303910021833778 0.2491090713689707 4.33976564318828e-06 5.362533722703675 -0.42993259265402317 NVSSFPDDATS(ph)PLQENR ddPTM_A549_PD325901_60min_R1 2 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSSFPDDAT(0.003)S(0.997)PLQENR;NVSSFPDDAT(0.022)S(0.978)PLQENR 382.07 2.778399999999998e-274 558730000.0 48807.0 48328.0 53933.0 55966.0 67399.0 65271.0 63527.0 62872.0 62915.0 59780.0 61841.0 True False 53761.850710185594 52400.77016713075 57593.21770547549 59422.89271199192 62665.12675392734 64739.454616531104 65944.55474830823 61617.968637870144 60270.90134280599 56005.480597881404 54234.949042397886 0.991276873297282 0.9661808684685353 1.061920748933539 1.095656836803486 1.1554381051402705 1.1936851745895691 1.2159051665514875 1.13613029468693 1.1112926702611914 1.0326455834613104 1.0 15.72693520457982 -5.87444030690015 3.8976012403496205 1.090691370560402 0.9784755619042855 0.3626963738208 0.06398855019912221 0.2544234464423632 7.10987610752589 0.011442586334217773 0.040117822554709484 1.335241103759445e-06 5.87444030690015 -0.11221580865611647 NVST(ph)GS(ph)AENEEK ddPTM_A549_MK2206_60min_R1 1 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 NVS(0.29)T(0.723)GS(0.987)AENEEK 85.271 0.00062602 4399000.0 946.27 1529.0 960.59 1234.1 2204.1 1990.4 1299.7 1752.8 2436.3 1793.8 2003.6 True False 1105.977241919695 1606.8195691129695 1096.8161062835773 1536.4545554008546 1879.879809753614 2201.02280687941 1535.8386664107006 2001.2647677248708 1884.4819399716516 1388.5793341517935 1506.050823453126 0.7343558561880877 1.066909259694701 0.7282729700773038 1.0201877197464146 1.2482180418343118 1.4614532076897828 1.0197787767143716 1.328816223569601 1.251273802069206 0.9220003153466032 1.0 10.556554740931285 -6.519514583091026 5.76725361893336 1.1630295137798932 0.8655376923356719 0.425808106559719 0.16883462715988223 0.12576246583185718 15.472388908681438 0.023504489415006335 0.05203652765147388 3.0233290490211823e-07 6.519514583091026 -0.29749182144422126 NVST(ph)GS(ph)AENEEK ddPTM_A549_PD325901_60min_R1 1 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 NVS(0.135)T(0.865)GS(0.999)AENEEK 62.162 0.011811 6421400.0 1425.4 1061.9 1354.1 992.5 1556.7 1280.2 1570.5 1114.8 1452.8 1009.6 1081.7 True False 1570.1055586759812 1151.3900397383738 1445.997368864783 1053.8044708689567 1447.3627623234574 1269.774475648958 1630.266236910576 1092.5644394563176 1391.7438682480895 945.8536837005856 948.657757461261 1.6550811357699748 1.2137043424592366 1.5242560949846355 1.1108373515956722 1.52569538481064 1.3384958544449683 1.7184977660156318 1.1516950458299848 1.4670663443185117 0.997044167152357 1.0 9.889743896971723 -10.819108393171838 0.7600602064278362 0.960978003491577 1.4096066424689353 0.4198665979232059 0.18715224524250929 0.6321078989640379 0.5520006823133506 0.1810648591485209 0.0319250856607813 1.5166717824458273e-11 10.819108393171838 0.4486286389773583 NVSTGS(ph)AENEEK ddPTM_A549_MK2206_60min_R1 2 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 NVST(0.003)GS(0.997)AENEEK;NVS(0.004)T(0.025)GS(0.97)AENEEK 147.51 5.785e-12 34747000.0 6651.299999999999 6666.7 7428.3 7947.099999999999 11252.900000000001 9629.7 8857.1 9357.5 12324.4 9959.1 9629.4 True False 7773.876831327701 7006.006554221998 8481.744638509976 9894.139856758873 9597.61331662649 10648.708462322484 10466.320421840599 10683.954281141876 9532.94307802267 7709.33239310466 7238.154222080021 1.0740137047112723 0.9679272283049931 1.1718104337479265 1.366942393487107 1.325975244814338 1.4711911539323868 1.4459930115764932 1.4760606023771126 1.3170406136059365 1.0650964536770033 1.0 12.821406131949727 -4.10488169114622 12.995080090330166 1.2181231114301643 1.1921532609268592 0.0 0.1864912923298864 0.0 0.0 0.028545288726210052 0.0 7.854495746592226e-05 4.10488169114622 -0.025969850503305025 NVSTGS(ph)AENEEK ddPTM_A549_PD325901_60min_R1 2 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 NVS(0.003)T(0.027)GS(0.97)AENEEK;NVS(0.007)T(0.114)GS(0.878)AENEEK 204.17 6.1231e-25 33269000.0 13578.1 12010.7 13504.4 14821.2 16413.8 15105.9 14942.1 14164.3 16178.4 15641.3 13919.900000000001 True False 14956.53871633109 13022.883840555322 14420.889792554151 15736.671862612566 15260.951312535975 14982.882558745176 15510.729792130853 13881.781924821602 15498.478109901493 14653.705648639037 12207.840545516327 1.2251584267148952 1.066763920449333 1.1812809758438916 1.2890626973656125 1.2500942534133106 1.2273163712191557 1.270554749982183 1.1371201870686358 1.269551158709535 1.2003519864142576 1.0 13.575520402986626 -10.853542861970265 0.9766378041725429 0.9933870181660114 1.2149701611519386 0.047249347379864526 0.0848232829393947 0.3234899255536939 0.5200866152573614 0.052276551693054195 0.011286024486923611 1.4010613027055455e-11 10.853542861970265 0.22158314298592718 NVTELNEPLSNEER ddPTM_A549_MK2206_60min_R1 2 NVTELNEPLSNEER 14 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ; 188.09 8.2231e-26 9306000.0 3822.5 4004.5 3932.7 4105.0 5620.4 4928.1 4299.3 3801.6 6382.5 5489.7 6009.6 False True 4467.644548847613 4208.311945397568 4490.415995566709 5110.725184280452 4793.646605298862 5449.588270991974 5080.4271589594 4340.488441911722 4936.873940758142 4249.572957237765 4517.250463477694 0.9890185600663172 0.931609167882561 0.9940595572178378 1.1313796358207375 1.0611868091122798 1.2063949774430929 1.1246724528637566 0.9608695548331653 1.0928935600700327 0.9407432666388278 1.0 12.141229192327158 -6.024764197534165 12.627085704987369 1.0621441491260475 0.9609308094495925 0.24382380575844143 0.07444545837148875 1.5631108634772626 798.3330183790113 0.009849974914437907 0.026653756458494025 9.445735982681001e-07 6.024764197534165 -0.10121333967645496 NVTELNEPLSNEER ddPTM_A549_PD325901_60min_R1 1 NVTELNEPLSNEER 14 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 182.17 1.6039e-25 8029900.0 5379.6 5124.4 5083.7 5705.1 6582.1 5979.0 5720.9 5676.6 5634.2 5321.3 6957.0 False True 5925.733031747792 5556.251172083363 5428.710452771507 6057.491069777818 6119.796003012283 5930.309006331129 5938.611980096599 5563.375759793452 5397.414167458277 4985.312209861262 6101.333104056571 0.9712193926615761 0.9106618303447813 0.8897580840426726 0.9928143516292195 1.003026043430318 0.9719693885240042 0.9733302343627519 0.911829540349887 0.8846286664581087 0.8170857294361942 1.0 12.574908781843435 -6.252475376910925 24.66003880167818 0.9525424980738366 0.9225579829973257 0.010302295689274099 0.056757710730097756 1314.7051169984077 3616750.875916815 0.007174758599098873 0.018696963156015177 5.591452283935003e-07 6.252475376910925 -0.029984515076510898 NVTLPAVFK ddPTM_A549_MK2206_60min_R1 2 NVTLPAVFK 9 0 P36578;H3BTP7;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 ; 118.18 0.00046829 4404900.0 3494.7 4174.7 4081.2 3558.1000000000004 5525.8 4552.0 3905.3999999999996 4216.200000000001 6411.0 4952.1 5210.0 False True 4084.5199227881644 4387.1743984145905 4659.975528544474 4429.8346597291775 4712.962139982999 5033.689618626947 4614.960627683583 4813.859261570972 4958.918736263291 3833.41717061718 3916.213211315028 1.0429769020202608 1.120259332596812 1.1899187498475596 1.1311525753833205 1.2034488128393885 1.2853461614610817 1.1784242528853333 1.2292127628961558 1.2662535129434724 0.9788581376369838 1.0 11.935243596726616 -4.232042338490708 16.172611342026187 1.1510668313302792 1.1591721384697105 0.0 0.09904709757267047 0.0 0.0 0.014552320858041702 0.0 5.860810258750073e-05 4.232042338490708 0.00810530713943125 NVTLPAVFK ddPTM_A549_PD325901_60min_R1 1 NVTLPAVFK 9 0 P36578;H3BTP7;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 126.07 0.0001827 5097200.0 3060.2 3714.4 3407.7 3880.5 5067.7 4724.7 3918.4 4691.0 4708.7 4359.4 4438.8 False True 3370.869251199828 4027.425523687934 3638.9670141647725 4120.189671745071 4711.762234615908 4686.223609669292 4067.5168562307526 4597.434324981691 4510.809713945335 4084.146740020139 3892.855739871541 0.8659116793552339 1.034568397292018 0.9347808542951179 1.0583977283168042 1.210361377216457 1.2038009941318635 1.044867091932098 1.180992729294767 1.1587405276143588 1.0491389902249268 1.0 11.926613167434065 -6.384578017011563 4.479010230267858 1.1011259274034757 0.9546723205640847 0.4936765910332441 0.07585840734277983 0.19625568664918827 6.280081789139688 0.01249865684473041 0.02998325326848974 4.1249812896338166e-07 6.384578017011563 -0.14645360683939102 NVTNNLKS(ph)LEAASEK ddPTM_A549_MK2206_60min_R1 1 NVTNNLKSLEAASEK 15 1 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YGX3;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;K7EPB9 P67936 TPM4 Tropomyosin alpha-4 chain 1 NVT(0.057)NNLKS(0.942)LEAAS(0.002)EK 42.309 0.022736000000000003 2700900.0 1617.9 2101.4 1365.9 1751.4 2168.0 1700.2 2021.8 1571.3 2591.0 2015.1 2570.4 True False 1890.961966142723 2208.352284194893 1559.6051588843718 2180.4930786233326 1849.0900719322328 1880.1140354985798 2389.134889396905 1794.0365869044317 2004.1426369767871 1559.8875104522683 1932.098740568933 0.9787087618440781 1.1429810691479532 0.8072077923021288 1.128561927420571 0.957037046350821 0.9730941778601618 1.2365490640987589 0.9285429099633661 1.0372878957452454 0.8073539295372337 1.0 10.915953110144795 NVTNNLKS(ph)LEAASEK ddPTM_A549_PD325901_60min_R1 2 NVTNNLKSLEAASEK 15 1 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YGX3;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;K7EPB9 P67936 TPM4 Tropomyosin alpha-4 chain 1 NVT(0.029)NNLKS(0.971)LEAASEK;NVT(0.102)NNLKS(0.898)LEAASEK 72.64399999999999 0.00043184 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NVTS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 NVTSPTR 7 0 E9PKU9;B7Z503;Q9BSF8;Q9BSF8-2 E9PKU9 BTBD10 BTB/POZ domain-containing protein 10 1 NVT(0.242)S(0.757)PT(0.002)R;NVT(0.045)S(0.954)PT(0.001)R 93.93799999999999 0.012086 154734000.0 6626.3 6444.7 6779.7 7527.799999999999 7940.799999999999 8166.7 7216.1 7066.2 7553.1 8015.700000000001 7783.400000000001 True False 7298.997097975758 6987.817486676617 7239.811211648008 7992.775109125772 7383.065602272825 8100.193102860757 7490.712634301432 6925.259097673342 7235.669473612779 7509.587334032084 6826.091143037791 1.069279173838794 1.0236923797602346 1.0606086352996014 1.1709153806535282 1.0815949344308295 1.1866517649888801 1.097364872126197 1.014527780622545 1.0600018842398162 1.100129953830373 1.0 12.736843962317556 -9.33213488677629 0.6734621713960792 1.0096641726222777 1.0948151675931055 0.024228556256059464 0.055780903396912565 0.5747123624341517 0.5749430257681597 0.01893077996414975 0.012939314363887304 4.654415103929028e-10 9.33213488677629 0.08515099497082779 NVTT(ph)PISK ddPTM_A549_PD325901_60min_R1 1 NVTTPISK 8 0 Q8IZT6;Q8IZT6-2 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 NVT(0.056)T(0.927)PIS(0.016)K 84.17 0.0034058 12218000.0 4586.6 5059.0 4419.2 5243.8 5581.3 4999.4 5705.5 6085.3 5955.1 4760.2 6609.7 True False 5052.228255523536 5485.339684562041 4719.1134868083955 5567.697616466126 5189.288742439717 4958.686543945784 5922.625924669394 5963.923917674503 5704.827856418089 4459.640159619184 5796.74880234048 0.8715623926093988 0.9462786592283065 0.8140965992700975 0.960486266753206 0.8952067649273509 0.8554254657272156 1.0217151245674283 1.0288394617456125 0.984142672201825 0.7693347273938402 1.0 12.501028253546936 -7.7659261859289375 24.999999696815202 0.9976152608193444 0.8929653036451556 0.08770075170938574 0.0794005853325361 51.72022795902051 288180.07443694654 0.005712847341222987 0.00803940675102598 1.7142486418996066e-08 7.7659261859289375 -0.10464995717418879 NVVGAR ddPTM_A549_PD325901_60min_R1 2 NVVGAR 6 0 P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;Q04917;A2IDB2;A0A0J9YWZ2;P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;P61981 P63104;P31946-2;P61981 YWHAZ;YWHAH;YWHAB;YWHAG 14-3-3 protein zeta/delta;14-3-3 protein eta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ; 121.87 0.045403 49355000.0 9431.0 8525.0 9251.6 10140.900000000001 10850.6 10879.8 9914.6 10566.5 11047.8 9911.7 11434.900000000001 False True 10388.428177264745 9243.431668490099 9879.469210390238 10767.280361345094 10088.491288537873 10791.198515986196 10291.905528477291 10355.742868241106 10583.499385759398 9285.873570458696 10028.479791803433 1.035892617119846 0.9217181327966602 0.9851412592430026 1.0736702456284057 1.005984107061121 1.0760552685967573 1.026267763623472 1.0326333684897242 1.055344339867903 0.9259502699550045 1.0 13.291815305235309 -6.024657704745878 22.915703848189278 1.0317203945948323 0.9724614783580384 0.13374947780379476 0.04648389968593569 198.42330998734684 184406.64800619544 0.004661450101301262 0.01242038939554457 9.448052443382852e-07 6.024657704745878 -0.05925891623679391 NVVVVDGVR ddPTM_A549_PD325901_60min_R1 2 NVVVVDGVR 9 0 P55084-2;P55084;C9JEY0;C9JE81;B5MD38;F5GZQ3;C9K0M0 P55084-2 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase 0 ; 88.948 0.0030583000000000003 4134800.0 2490.6 2305.8 3055.9 2747.8 2981.2 2852.3 3263.6000000000004 2892.7 2992.6 3062.6 3177.5 False True 2743.4438785171865 2500.117858205804 3263.2917506195186 2917.525365293418 2771.8107965816725 2829.0718144770526 3387.7980839104443 2835.002829220748 2866.831429046831 2869.2269133334125 2786.6876438320737 0.9844820192135272 0.8971647266386135 1.1710288944088652 1.0469509820201537 0.9946614586377024 1.0152095161216903 1.2157078642842662 1.0173378546733118 1.0287595150436555 1.0296191321205401 1.0 11.444335586368595 -4.3743061558726755 16.59682356304645 1.0279905848657112 0.8379232485656212 0.0 0.08379629814432807 0.0 0.0 0.010478587822123294 0.0 4.2237075904656627e-05 4.3743061558726755 -0.19006733630008998 NVYATTVGT(ph)PYK ddPTM_A549_MK2206_60min_R1 1 NVYATTVGTPYK 12 0 Q13439-3;Q13439-4;Q13439;Q13439-5;H0Y6I0 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 NVYAT(0.005)T(0.244)VGT(0.751)PYK 99.01100000000001 0.0002645 3654000.0 2024.3 2888.1 2801.1 2628.9 3838.2 2861.3 2157.4 2702.5 3637.7 3104.9 4223.3 True False 2365.95235061667 3035.091953927511 3198.338099825033 3272.980618015804 3273.605864432793 3164.080866822778 2549.3716541620756 3085.587651059143 2813.766758213224 2403.500933553297 3174.5380528496657 0.745290278846348 0.9560735777613442 1.0074971685893017 1.0310100441472956 1.0312070008088887 0.9967059188288826 0.8030685446890765 0.9719800486528504 0.8863547109436629 0.757118325104266 1.0 11.632330956121635 -5.346595154885485 0.004444481534638168 1.860261720166753 1.525193431340491e-07 0.0 0.10784972443852063 126406.18202476954 84.41966813767168 17083.56606157924 18266.246656236537 4.501993308080123e-06 5.346595154885485 -1.86026156764741 NVYATTVGT(ph)PYK ddPTM_A549_PD325901_60min_R1 2 NVYATTVGTPYK 12 0 Q13439-3;Q13439-4;Q13439;Q13439-5;H0Y6I0 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 NVYATT(0.001)VGT(0.999)PYK;NVYATT(0.004)VGT(0.995)PYK 166.38 1.0417e-14 10132600.0 5960.8 5479.4 6423.8 6418.3 7634.3 6955.0 6159.799999999999 6703.8 6156.0 8066.8 9167.1 True False 6565.93602789097 5941.168267955972 6859.757697447449 6814.743813983098 7098.093104905224 6898.360785922898 6394.214559771894 6570.087449970634 5897.284728066656 7557.460871311298 8039.6048150347815 0.8166988526117703 0.7389876000926631 0.8532456327479041 0.847646615818593 0.882890797272915 0.8580472479222293 0.7953394111877414 0.8172152240224522 0.7335291800709165 0.9400289000745621 1.0 12.972908872459119 -10.94950950657938 1.2012662442380635 1.0003768821329109 0.8106180926000266 0.6024393633205387 0.047500223662726104 0.2344015953314514 0.5992947498004325 0.03668806390612166 0.0084871809639337 1.1232863809943635e-11 10.94950950657938 -0.18975878953288428 NVYS(ph)SSR ddPTM_A549_MK2206_60min_R1 1 NVYSSSR 7 0 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 NVYS(0.498)S(0.498)S(0.003)R 123.21 0.0062835 78253000.0 4456.9 4973.8 5051.5 4380.3 6549.5 5533.9 5325.4 6231.6 7608.4 6367.7 6662.2 True False 5209.115759256748 5226.94517518253 5767.878658836228 5453.4736966391365 5586.07722607019 6119.493624894478 6292.956246905865 7114.948383474614 5885.109548118178 4929.23214744028 5007.791872633969 1.0402021273533653 1.0437624622033845 1.1517808258677638 1.0889976730943394 1.115477114094212 1.2219944000339977 1.2566329446107616 1.4207755762286371 1.1751905226490098 0.9843125019585989 1.0 12.289958888754033 -5.753250107614084 23.260421961548538 1.133738044027722 1.0419821528220352 0.1006121670164607 0.11672893923604098 172.47209031619866 489849.7236964081 0.01812058131874308 0.06754189297756036 1.765021062789243e-06 5.753250107614084 -0.09175589120568683 NVYS(ph)SSR ddPTM_A549_PD325901_60min_R1 2 NVYSSSR 7 0 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 NVYS(0.87)S(0.13)SR;NVYS(0.5)S(0.5)SR 123.35 0.0062651 150091000.0 9591.1 9434.8 10368.400000000001 10249.0 11533.0 11075.1 11408.6 11545.7 11494.4 10540.3 11431.599999999999 True False 10564.781411405353 10229.903707433483 11072.061974254206 10882.057452832174 10722.961866690059 10984.908057537707 11842.76051602546 11315.41195607357 11011.330340852728 9874.783659181147 10025.585670883002 1.0537819692757022 1.020379660925334 1.104380565657172 1.085428603381905 1.0695596465583477 1.0956874159921486 1.1812537346740772 1.1286534600104783 1.0983229012577882 0.9849582840691468 1.0 13.291398897506273 -10.560825086447103 0.9546252978972621 1.0023418104765787 1.0933314262230782 0.4808896408408665 0.039646489398170046 0.4301748071894706 0.7258090049298933 0.025105185675821293 0.007740438212202366 2.749001099547275e-11 10.560825086447103 0.09098961574649955 NVYSS(ph)SR ddPTM_A549_MK2206_60min_R1 1 NVYSSSR 7 0 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 NVYS(0.255)S(0.736)S(0.009)R 116.05 0.0071797 75690000.0 3243.4 4048.0 3777.0 3915.3 5959.5 5007.9 3893.5 4441.7 6264.2 5177.2 5344.4 True False 3790.8066264832837 4254.025909594048 4312.635394323355 4874.548675764494 5082.86544450191 5537.832654025019 4600.89855171968 5071.324577135759 4845.368701871865 4007.6669242784424 4017.237982063727 0.9436350655372123 1.0589429674287505 1.0735324652356983 1.213407992637855 1.2652637128285715 1.3785174487422662 1.1452890200336392 1.2623908764624716 1.2061443020069007 0.9976175029141868 1.0 11.971988214149356 -5.5568620067197845 1.7097077373833338 1.151684684828373 0.9362344655244235 0.28359797076945925 0.11029015485560438 0.7164263599203766 3.05069196898442 0.01839326647031696 0.20830952286620077 2.774201442915246e-06 5.5568620067197845 -0.21545021930394959 NVYSSS(ph)RYDDYDR ddPTM_A549_MK2206_60min_R1 2 NVYSSSRYDDYDR 13 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 NVYS(0.251)S(0.361)S(0.388)RYDDYDR;NVYS(0.297)S(0.297)S(0.407)RYDDYDR 82.007 0.00015729 18611700.0 2725.6 3495.5 3449.8 2704.7 4035.2000000000003 3078.1 2956.1 2016.63 4710.799999999999 5468.9 4964.1 True False 3185.6146454778454 3673.4060195123507 3939.0335142538274 3367.351621418596 3441.627425397118 3403.822498922587 3493.1851056218175 2302.4934781703605 3643.8113216017937 4233.471691683991 3731.3769678097747 0.8537370179855406 0.9844639261062247 1.0556514520605893 0.9024420878588281 0.9223478236285698 0.9122161947953883 0.9361651571945652 0.6170626816946525 0.9765326186650662 1.1345601712734301 1.0 11.865492402553905 -8.969789184325673 24.99999379559189 0.9896469988440528 0.9018482101400009 0.20607602134528336 0.11148217337464315 281.3454157403767 232820.24385548415 0.01804347509265661 0.01900044642766589 1.0720395695048194e-09 8.969789184325673 -0.08779878870405189 NWGAVVRS(ph)PEGTPQK ddPTM_A549_MK2206_60min_R1 2 NWGAVVRSPEGTPQK 15 1 C9J0I9;Q86WB0;Q86WB0-3;F8WAU5;F8WBD7;F8WDK5;F8WF13 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 NWGAVVRS(0.982)PEGT(0.018)PQK;NWGAVVRS(1)PEGTPQK 123.0 1.0104e-07 68623000.0 9259.2 12272.599999999999 9998.400000000001 8971.4 14605.6 11362.599999999999 10524.1 11394.8 16029.3 15518.5 14947.3 True False 10821.926594294267 12897.222919487132 11416.323464814044 11169.393402741454 12457.135587921333 12564.982790116548 12436.19274384309 13010.047795111457 12398.689143532229 12012.860071933677 11235.472885506546 0.9631928005677677 1.1479020999751777 1.0160963923059074 0.9941186736474321 1.108732646579629 1.1183314594906846 1.1068686534667749 1.157943944833338 1.1035306897964392 1.069190428774025 1.0 13.455773226383064 -5.222324687087147 22.76482086069894 1.0674316495442542 0.9631918997037602 0.2371437588070313 0.055908345558473134 9312.835768146348 5419742.937828715 0.00874240223194773 2.9541133310124725 5.993428282433432e-06 5.222324687087147 -0.104239749840494 NWS(ph)GRGEGEQK ddPTM_A549_MK2206_60min_R1 1 NWSGRGEGEQK 11 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 NWS(1)GRGEGEQK 55.213 0.0053898 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NWS(ph)GRGEGEQK ddPTM_A549_PD325901_60min_R1 1 NWSGRGEGEQK 11 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 NWS(1)GRGEGEQK 66.797 0.0013832 14977000.0 4175.4 3841.3 3855.2 4639.5 4783.0 5464.6 4418.0 3334.3 5163.9 5289.2 5331.0 True False 4599.283534232977 4165.019832043523 4116.837055200881 4926.071377931007 4447.058580454228 5420.0981093823575 4586.129407622365 3267.7947707922517 4946.879240945972 4955.23900933948 4675.320795993325 0.9837364610733212 0.890852203256914 0.8805464341032907 1.053632807860494 0.9511772078325161 1.1592997242087204 0.9809229372137638 0.6989455725888798 1.0580833822537627 1.0598714453104565 1.0 12.190849643226109 -3.6051242225504634 0.20399441248589395 1.0223787469208405 0.747223254848432 0.022100575342489326 0.1146125796435014 65.0015055831079 1.2856935922860937 0.09783346617111074 5.08372670873668 0.00024824229488705924 3.6051242225504634 -0.2751554920724085 NWS(ph)RER ddPTM_A549_MK2206_60min_R1 1 NWSRER 6 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 NWS(1)RER 67.169 0.015354 10062000.0 1365.3 1546.1 1205.8 1142.6 884.34 1298.7 1275.2 988.23 1086.8 2395.9 1900.7 True False 1595.7292616197901 1624.789886072963 1376.800571478714 1422.5370512932636 754.2547574781142 1436.1275719927103 1506.8873335438393 1128.3146288274472 840.6415352629768 1854.6645259751833 1428.7037333486498 1.116907042637636 1.137247595948195 0.9636711512272154 0.9956837223061408 0.5279294369241014 1.0051962058128456 1.0547234520147433 0.7897470990594115 0.5883945814942678 1.2981449426384226 1.0 10.48049106411725 -6.159816354228101 1.8265509026120919 0.8196360323913497 1.123877614341117 0.04253332843372548 0.21628413613540662 0.376111120279212 2.365855763255824 0.028082779950749565 0.10665528283887553 6.921235804369708e-07 6.159816354228101 0.30424158194976736 NWS(ph)RER ddPTM_A549_PD325901_60min_R1 2 NWSRER 6 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 NWS(1)RER;NWS(1)RER 52.786 0.024736 38360000.0 5094.4 4083.1 4082.2 4282.9 3641.2 4387.8 3269.8 3335.9 5472.9 4105.1 5233.3 True False 5611.579737700935 4427.1971666406935 4359.242640262771 4547.445005828366 3385.4546734580667 4352.067211570453 3394.234028303214 3269.362857537075 5242.893045522417 3845.9032854192506 4589.637276621997 1.2226630122350526 0.9646072009200559 0.9498011231665787 0.9908070576713015 0.7376301152821783 0.9482377253946312 0.7395429799196228 0.7123357817817244 1.1423327660832536 0.8379536450535935 1.0 12.164164425251817 -8.792737822560348 24.996321505241912 1.067212694482515 0.9042498530557957 0.0 0.15695219535872168 228.61089586166162 182577.76286415025 0.02540437512756783 0.027046279099110244 1.6116182527287594e-09 8.792737822560348 -0.16296284142671935 NWT(ph)FPNTR ddPTM_A549_MK2206_60min_R1 1 NWTFPNTR 8 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 NWT(0.983)FPNT(0.017)R 55.083999999999996 0.022896 3420400.0 1030.4 1094.3 895.04 663.51 1298.1 1155.6 1202.0 1167.6 1705.9 1354.9 1569.3 True False 1204.3063291386738 1149.9951958667907 1021.9701306156143 826.0699797860955 1107.1512095826722 1277.8848249748023 1420.3878410599862 1333.1108756250333 1319.5163737625257 1048.827148981083 1179.5994995233534 1.020945100116865 0.9749030889988296 0.8663704342266734 0.7002969907327781 0.9385822985089806 1.0833209284093148 1.2041271987941071 1.1301385564877824 1.1186138806397503 0.8891383468752637 1.0 10.204081400072536 -7.17678713524558 4.535151251953119 1.0775204819148503 0.8876451307454787 0.3931922839687888 0.10606530829883778 0.16474446229463963 6.087400592783545 0.01498069191246303 0.026320347183940877 6.655993125856766e-08 7.17678713524558 -0.1898753511693716 NWT(ph)FPNTR ddPTM_A549_PD325901_60min_R1 1 NWTFPNTR 8 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 NWT(0.997)FPNT(0.003)R 51.092 0.031721 2309600.0 1134.9 1165.1 1098.4 1207.2 1210.0 1289.5 983.39 910.09 1593.3 1317.8 1672.2 True False 1250.1142125307776 1263.2870659188056 1172.9440292157726 1281.766002249878 1125.0137742733873 1278.9987395323624 1020.8134445816555 891.937540998207 1526.339141850002 1234.5938831028448 1466.5300009491734 0.8524300298811983 0.861412357811416 0.7998090925222225 0.8740128067071852 0.7671263278250369 0.8721258608446903 0.696074027753241 0.6081959049054051 1.0407827598904345 0.8418470009503972 1.0 10.518190869413878 -8.794512672005151 24.999694207862106 1.0192585975785147 0.7954706012198246 0.3486625167713209 0.09425326195122334 86.38618945310458 65297.86935904716 0.013796023380244379 0.014687442417433706 1.6050454248041066e-09 8.794512672005151 -0.22378799635869007 NWTEDMEGGIS(ph)SPVK ddPTM_A549_MK2206_60min_R1 1 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.591)S(0.409)PVK 82.90799999999999 9.115200000000001e-05 4608600.0 1362.5 1470.6 1450.6 1161.9 3014.6 1949.2 1524.5 2208.3 2970.4 2762.9 2862.2 True False 1592.456690073217 1545.4472585595372 1656.3168925087266 1446.5655521596736 2571.156333416472 2155.463050225756 1801.4819165523688 2521.333287635116 2297.6091427540914 2138.7589710826146 2151.4367472986314 0.740182899670522 0.7183326493330647 0.769865483885788 0.6723718714835553 1.1950880436735336 1.0018714484319282 0.8373390102285508 1.1719300094696863 1.0679417582873378 0.9941072977246785 1.0 11.071084710028476 -6.749222900289803 24.995220011833126 1.035630341998852 0.7278897154634751 0.727229907371788 0.09223880536016302 88.31251109549574 180688.4127490765 0.012625174404772262 0.026129181714680816 1.78146420181771e-07 6.749222900289803 -0.3077406265353768 NWTEDMEGGIS(ph)SPVK ddPTM_A549_PD325901_60min_R1 3 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.602)S(0.398)PVK;NWTEDMEGGIS(0.511)S(0.489)PVK;NWTEDMEGGIS(0.5)S(0.5)PVK 182.57 3.2158999999999995e-33 24057300.0 10136.5 8598.1 8593.5 8948.8 10014.8 10955.8 8943.4 10057.2 10405.7 11648.8 12883.0 True False 11165.550017903097 9322.692062034577 9176.706586913457 9501.547051800622 9311.394997184403 10866.579597183907 9283.745981016265 9856.601256279233 9968.38461579649 10913.292780003356 11298.472672065658 0.9882353431281735 0.8251285224669348 0.812207707471997 0.8409585372801976 0.8241286470697844 0.961774207238686 0.821681500719066 0.8723835107951088 0.8822771807416345 0.9659086760448055 1.0 13.463840141803855 -10.456566971582468 0.5274418399067528 1.017139688358492 0.8612184731467715 0.3724460440291031 0.05586450602176028 0.8220904021702637 0.3580348535275859 0.06226334918105701 0.012791934981468883 3.494886115844202e-11 10.456566971582468 -0.15592121521172053 NWTEDMEGGIS(ph)SPVKK ddPTM_A549_MK2206_60min_R1 4 NWTEDMEGGISSPVKK 16 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.5)S(0.5)PVKK;NWT(0.004)EDMEGGIS(0.522)S(0.474)PVKK;NWTEDMEGGIS(0.854)S(0.146)PVKK;NWTEDMEGGIS(0.5)S(0.5)PVKK 238.69 1.2287999999999997e-65 322156000.0 46853.5 56488.700000000004 47383.7 44359.399999999994 100754.5 75033.2 68914.6 72381.7 99906.8 85036.20000000001 82076.5 True False 54761.22534190499 59363.73354725428 54103.42116335706 55227.454991369115 85933.64651867916 82973.16342099271 81435.49077496876 82642.02763465948 77278.0693183762 65826.46335979433 61694.63985383827 0.8876172301457738 0.9622186576969057 0.876954971964085 0.8951742829232707 1.3928867519490493 1.3449006853361285 1.3199767592111542 1.3395333505544078 1.2525896820446132 1.0669721634771647 1.0 15.912857530314621 -6.731947720547883 24.991942712018382 1.1873638079912592 0.9075047167935457 0.6194160177292822 0.12289226252028422 160.51284225743163 136021.68642128276 0.02263088262925277 0.04710448165217196 1.8537547610654897e-07 6.731947720547883 -0.27985909119771346 NWTEDMEGGIS(ph)SPVKK ddPTM_A549_PD325901_60min_R1 6 NWTEDMEGGISSPVKK 16 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.863)S(0.137)PVKK;NWTEDMEGGIS(0.809)S(0.191)PVKK;NWTEDMEGGIS(0.904)S(0.096)PVKK;NWTEDMEGGIS(0.945)S(0.055)PVKK;NWTEDMEGGIS(0.5)S(0.5)PVKK;NWTEDMEGGIS(0.648)S(0.352)PVKK 229.68 1.6484e-55 796877000.0 124013.6 105185.2 112406.5 116811.6 116706.9 134244.4 112594.3 100752.79999999999 157964.09999999998 134392.90000000002 159098.3 True False 136603.36937801293 114049.5259514915 120035.08104519547 124026.78723360832 108509.80996094787 133151.15811498894 116879.13770046519 98743.20636495759 151325.4182119548 125907.30935836407 139530.2177072191 0.9790235521932054 0.817382269056624 0.8602801817242849 0.8888883660588695 0.7776796434779283 0.9542818774524129 0.8376618314013999 0.7076833103790732 1.084535097117715 0.902365891971584 1.0 17.090218071153558 -8.782575939449096 24.990572829349095 1.0399193692138637 0.8534938845302165 0.3301747063867836 0.08436022474178488 119.10003607718731 140815.9722323837 0.012554215667752116 0.013371417784125235 1.6497725017558364e-09 8.782575939449096 -0.18642548468364728 NWTEDMEGGISS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.168)S(0.832)PVK 178.03 9.2173e-28 6396000.0 3701.2 3309.9 2850.2 3928.5 4180.4 4188.5 3314.2 3506.8 3839.9 4490.4 4635.9 True False 4076.9430993205683 3588.8368890950615 3043.631711644935 4171.154522729165 3886.7831255970837 4154.390244692751 3440.323694599828 3436.85412296862 3678.5223566119507 4206.875377663543 4065.7136893913794 1.0027619775486134 0.882707726926117 0.7486094556010299 1.0259341511461841 0.9559903678753432 1.0218108214389898 0.846179528966003 0.8453261556356918 0.9047666996843081 1.03472002680378 1.0 11.989292907754514 -10.622529761335683 0.99305405345466 0.9980302384883707 0.9131524170816592 0.17880352679510092 0.0816508077386477 0.8584368881776827 1.5598902994410597 0.0485180769983027 0.014445974711383768 2.3849003573946176e-11 10.622529761335683 -0.08487782140671152 NWTEDMEGGISS(ph)PVKK ddPTM_A549_MK2206_60min_R1 2 NWTEDMEGGISSPVKK 16 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.094)S(0.906)PVKK;NWTEDMEGGIS(0.234)S(0.766)PVKK 203.75 5.131899999999999e-40 284490000.0 36215.0 40402.0 34431.6 32457.2 73328.0 54134.0 50774.0 51482.0 73703.0 63648.0 59267.0 True False 42327.20662825802 42458.28922910541 39314.51862408898 40409.215457059094 62541.54833701428 59862.42394875904 59998.97857069856 58779.73115701265 57009.388179506015 49269.872594544206 44549.36821401299 0.9501191223390686 0.9530615344562882 0.8824932922779949 0.9070659602384302 1.403870601184909 1.343732276093858 1.3467975187092753 1.3194290629361496 1.2796901609386624 1.1059611969771186 1.0 15.443117351566602 -6.73171603581105 24.92090448249074 1.1978052052922192 0.9224122521252403 0.6204411241617017 0.12005765812981764 158.9844056370299 133296.32188582406 0.022877376632442607 0.04761786806139718 1.8547439545325883e-07 6.73171603581105 -0.275392953166979 NYADQIS(ph)RLEER ddPTM_A549_MK2206_60min_R1 1 NYADQISRLEER 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;E9PFH7;A0A087WYG2;A0A669KB35;Q9UPT6-2;Q9UPT6;O60271;O60271-3 A0A087X2D8;O60271 SPAG9;MAPK8IP3 C-Jun-amino-terminal kinase-interacting protein 4;C-Jun-amino-terminal kinase-interacting protein 3 1 NYADQIS(1)RLEER 68.513 0.0011569 2217900.0 379.24 312.81 230.27 294.45 284.4 367.74 500.37 284.4 474.99 391.18 385.31 True False 443.2464404721962 328.7306928804631 262.92574854403983 366.59026321836296 242.56513674240185 406.6540027139441 591.2807521058114 324.71457093847164 367.4055234031666 302.81216631369114 289.6268929849891 1.5304049838188503 1.135014395564091 0.9078084767413737 1.2657328172814488 0.8375090249473953 1.4040616136258464 2.04152572301515 1.1211478588602648 1.2685476808336602 1.0455250311627151 1.0 8.178051758268815 -10.454088059652973 0.9173972691906273 1.0095160768009073 1.270009989114795 0.09211392687440456 0.30774406599769427 1.1037645292326648 1.747465530710403 0.17469654597599368 0.05840064350806961 3.5148916365680326e-11 10.454088059652973 0.26049391231388763 NYADQIS(ph)RLEER ddPTM_A549_PD325901_60min_R1 2 NYADQISRLEER 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;E9PFH7;A0A087WYG2;A0A669KB35;Q9UPT6-2;Q9UPT6;O60271;O60271-3 A0A087X2D8;O60271 SPAG9;MAPK8IP3 C-Jun-amino-terminal kinase-interacting protein 4;C-Jun-amino-terminal kinase-interacting protein 3 1 NY(0.001)ADQIS(0.999)RLEER;NYADQIS(1)RLEER 54.7 0.0055883999999999994 7231500.0 1230.18 1711.5 1423.99 1310.27 1837.17 1614.8 1760.02 1277.03 1428.79 1469.37 1750.68 True False 1355.066967989349 1855.7341115097736 1520.630524547495 1391.202402060925 1708.1335170924297 1601.649604185234 1826.9985242198977 1251.558634839346 1368.742925051066 1376.593727435747 1535.357458474882 0.8825742569000049 1.2086658395193075 0.9904081399115906 0.9061097755325651 1.1125314874812096 1.0431770108937382 1.1899499456202935 0.8151578174391767 0.8914816009105012 0.8965949393981257 1.0 10.58435886438256 -8.2675306335338 24.9999004015764 0.9373035602771287 1.0485054466814443 0.2861590183649546 0.10599223612220489 600.8455165172447 2466001.573912173 0.017008594182438636 0.020834412896032706 5.4009401717752515e-09 8.2675306335338 0.11120188640431561 NYAES(ph)DHS(ph)EDEDNDNNSATAEESTK ddPTM_A549_MK2206_60min_R1 2 NYAESDHSEDEDNDNNSATAEESTK 25 0 Q9P2R6;A0A590UJ84;A0A590UK57;H7BYW9 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 NY(0.007)AES(0.995)DHS(0.995)EDEDNDNNS(0.003)AT(0.001)AEESTK;NY(0.002)AES(0.996)DHS(0.998)EDEDNDNNS(0.003)ATAEESTK 82.492 8.364e-07 10749500.0 969.56 1200.77 889.76 751.72 1776.28 1498.13 1247.69 956.9200000000001 1779.62 1335.4 1561.19 True False 1133.1980245338639 1261.8840640966516 1015.9413472208493 935.8914337459934 1514.9915650238877 1656.6611222217903 1474.379122639046 1092.5663404445932 1376.5389114691739 1033.7322125244214 1173.503436347967 0.965653776064315 1.075313480140912 0.8657335937443328 0.7975191250044904 1.2909988314466792 1.411722429529007 1.2563909716595525 0.93102951947439 1.1730165151906746 0.880894065160538 1.0 10.196606351146018 -6.755290084634983 24.99890746665461 1.1227666433587011 0.9324076700780919 0.2769339522691766 0.16143757539579598 171.830785264141 698541.6104737822 0.02324331155769845 0.04743917775062444 1.756749810511953e-07 6.755290084634983 -0.19035897328060924 NYAES(ph)DHS(ph)EDEDNDNNSATAEESTK ddPTM_A549_PD325901_60min_R1 2 NYAESDHSEDEDNDNNSATAEESTK 25 0 Q9P2R6;A0A590UJ84;A0A590UK57;H7BYW9 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 NYAES(1)DHS(1)EDEDNDNNSATAEESTK;NYAES(1)DHS(1)EDEDNDNNSATAEESTK 117.49 2.5477e-17 18923900.0 1697.9900000000002 2027.93 2490.2 2584.1000000000004 2657.2 2347.3 2349.7 2796.9 2085.7200000000003 2396.7 2003.79 True False 1870.368694805828 2198.8307781209537 2659.1999467890723 2743.7139880830946 2470.5674388423504 2328.1843670448334 2439.1191193051773 2741.113635374395 1998.0644416866785 2245.371952976619 1757.3365330713693 1.064320157014495 1.2512291964237303 1.5131990354411395 1.5612911565025014 1.4058590328879341 1.3248369468400967 1.3879635877382168 1.5598114440741968 1.1369845240709695 1.277713124789075 1.0 10.779174781131733 -8.926002038889742 5.45850294042733 1.0589364439957814 1.3881047055007525 0.31508212941090896 0.15234264655088847 0.11984170509041957 6.142924859688779 0.025680451397426488 0.027021649225131752 1.1857631813313788e-09 8.926002038889742 0.32916826150497114 NYAES(ph)DHS(ph)EDEDNDNNSATAEESTKK ddPTM_A549_PD325901_60min_R1 1 NYAESDHSEDEDNDNNSATAEESTKK 26 1 Q9P2R6;A0A590UJ84;A0A590UK57;H7BYW9 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 NYAES(1)DHS(1)EDEDNDNNSATAEESTKK 134.67 1.3076000000000002e-24 11879000.0 903.89 1058.3 937.24 800.18 1250.5 1244.4 1250.2 1199.1 1270.8 1428.9 1572.2 True False 995.6522473913512 1147.4866551041732 1000.8467424819654 849.6053012593663 1162.669193990803 1234.2660189795056 1297.7770451356903 1175.183009824247 1217.3926953260418 1338.6790101423996 1378.8293669969441 0.7220996819641701 0.8322180268058624 0.7258670046039015 0.6161787104301277 0.8432292071955702 0.8951550123041737 0.9412165683431999 0.8523048884458895 0.8829175853553893 0.9708808371684228 1.0 10.429228216047118 -7.075783600690119 3.1270402669970667 0.9324714792599043 0.7315813997620725 0.690646319293374 0.0616036311231417 0.12430435920745429 2.3701467726767222 0.010427408713901933 0.019372365787784836 8.398783750439153e-08 7.075783600690119 -0.20089007949783177 NYDPYKPLDIT(ph)PPPDQK ddPTM_A549_MK2206_60min_R1 2 NYDPYKPLDITPPPDQK 17 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NYDPY(0.003)KPLDIT(0.997)PPPDQK;NYDPYKPLDIT(1)PPPDQK 122.34 2.5258e-10 64385000.0 9733.8 16236.2 16588.300000000003 15821.0 24417.0 17910.4 19232.4 17908.4 28775.0 22164.2 21869.4 True False 11376.627471438307 17062.553229582732 18940.770376397693 19697.14571023167 20825.291645004312 19805.66664003869 22726.67813178208 20446.970542174855 22257.50844423276 17157.291826294568 16438.624415265418 0.6920668776198583 1.037955050164533 1.1522113954260493 1.1982234773817382 1.2668512351718004 1.204825059549784 1.3825170256142223 1.243837076975076 1.353976335365613 1.0437182207509876 1.0 14.004801958842393 -5.1574844129311606 1.483094216598086 1.202579849241144 0.393402978367774 0.6624440398826813 0.10784739260658402 0.8722880639623731 1.432048313381594 0.01992164405833892 1.1089608270042108 6.95849928690733e-06 5.1574844129311606 -0.80917687087337 NYDPYKPLDIT(ph)PPPDQK ddPTM_A549_PD325901_60min_R1 3 NYDPYKPLDITPPPDQK 17 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NYDPYKPLDIT(1)PPPDQK;NYDPYKPLDIT(1)PPPDQK;NY(0.006)DPY(0.028)KPLDIT(0.966)PPPDQK 142.99 1.2556000000000001e-16 96586000.0 24174.0 22278.6 26114.2 27105.0 31492.0 32988.0 29361.0 31607.0 29869.0 28081.0 30557.0 True False 26628.12668404179 24156.095808753493 27886.46664944148 28779.214290078668 29280.11056150209 32719.356665136558 30478.3489219557 30976.573589788186 28613.70980224544 26307.96086766655 26798.682716782594 0.9936356561050669 0.9013911640375447 1.0405909478519877 1.0739040643985 1.092595142490549 1.2209315290204976 1.1373077268036287 1.1558991132944456 1.0677282202504004 0.9816885831926084 1.0 14.709874466625324 -5.9033473738887565 5.517875785740195 1.068695951037342 0.9487229279467606 0.35743737924591223 0.06923313250279052 0.20306018789808675 9.437574953781366 0.010830918359519874 0.03490424656096178 1.2492594004421118e-06 5.9033473738887565 -0.11997302309058133 NYEGS(ph)PIKVTLATLK ddPTM_A549_MK2206_60min_R1 1 NYEGSPIKVTLATLK 15 1 E5RI98 E5RI98 NPM1 1 NY(0.015)EGS(0.984)PIKVTLATLK 47.397 0.0080757 2598100.0 903.29 1540.9 1341.5 1329.5 1935.1 1684.6 1701.4 1337.2 1862.5 1638.6 1807.6 True False 1055.7432686798063 1619.32522828396 1531.7448719843217 1655.2275596835232 1650.4493534114702 1862.8632538530226 2010.5223567216792 1526.7521950032506 1440.6467238013374 1268.4391219428755 1358.7230327779343 0.777011387318076 1.1917993507280287 1.1273415074539812 1.2182229341467627 1.2147062451992854 1.3710397254725006 1.4797146351535155 1.1236669712456242 1.0602946215285014 0.9335523806860978 1.0 10.408035686344386 -8.663053011248202 3.748870288651817 1.0278145156058036 1.2076345812198548 0.20429423129836066 0.16661428133049375 0.2844562413396263 7.671964729990859 0.02865853545705694 0.03228061180066784 2.1724359888208355e-09 8.663053011248202 0.17982006561405117 NYFTDKAAS(ph)YTEEDENHTAK ddPTM_A549_MK2206_60min_R1 1 NYFTDKAASYTEEDENHTAK 20 1 Q14126 Q14126 DSG2 Desmoglein-2 1 NYFT(0.001)DKAAS(0.84)YT(0.159)EEDENHTAK 80.68 8.2729e-05 4807200.0 1969.9 2762.0 2653.9 2372.6 4007.1 2648.6 2514.4 2566.7 3827.7 4599.2 3904.1 True False 2302.370960568977 2902.5740025441582 3030.2629263952226 2953.8871065100607 3417.6608981732707 2928.873094001611 2971.2339330792233 2930.537585189083 2960.732061580875 3560.237525716874 2934.6042223214945 0.7845592748270589 0.9890853357554301 1.0325967990320872 1.0065708636421549 1.164607094945717 0.998047052384001 1.0124819934760239 0.9986142468202426 1.008903360480655 1.2131917137706754 1.0 11.518950230929063 -5.263318525387584 3.625538010116298 1.0162748954722618 0.7589105893276556 0.46650289968637737 0.07515779888475779 0.11920716988402123 2.828689772629833 0.006227884688312901 0.08251863596321393 5.453577316675905e-06 5.263318525387584 -0.25736430614460615 NYFTDKAASYT(ph)EEDENHTAK ddPTM_A549_PD325901_60min_R1 1 NYFTDKAASYTEEDENHTAK 20 1 Q14126 Q14126 DSG2 Desmoglein-2 1 NY(0.001)FT(0.015)DKAAS(0.453)Y(0.007)T(0.512)EEDENHT(0.013)AK 40.669000000000004 0.052097000000000004 11390000.0 2108.7 1958.0 2142.2 2066.1 1858.1 2273.2 2655.0 2281.5 2476.5 2123.3 2438.8 True False 2322.7736716571076 2123.0075316015977 2287.5825740950722 2193.7183045464503 1727.5934660970088 2254.687812877058 2756.0374778717473 2235.9936926978753 2372.421317260734 1989.2344756353555 2138.8430608269605 1.0859953748822657 0.9925962173123445 1.0695420416730357 1.0256565078216973 0.8077233424639644 1.0541623432648244 1.28856461156442 1.0454220478585992 1.1092077584895188 0.9300516302800821 1.0 11.062614912245381 -7.502834623290436 24.954913008358677 1.072953232829199 0.9947110516353358 0.11184547469988271 0.10624271847265519 1313.1290795419711 1634845.4582597038 0.015360337241636303 0.024353593086426848 3.1417048082968516e-08 7.502834623290436 -0.07824218119386328 NYGS(ph)PLISGSTPK ddPTM_A549_MK2206_60min_R1 2 NYGSPLISGSTPK 13 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGS(0.992)PLIS(0.006)GS(0.002)TPK;NYGS(1)PLISGSTPK 141.0 2.7662e-12 10243900.0 2964.0 4258.8 3944.7 4196.1 5602.1 4010.9 3721.7 4599.8 6939.3 5544.799999999999 6907.0 True False 3464.2507371574443 4475.554729194447 4504.117776009355 5224.14468837009 4778.038511056994 4435.33077578006 4397.884715534898 5251.835736296702 5367.559629785037 4292.225828969155 5191.801276497677 0.6672541094435694 0.862042765283497 0.8675443331004719 1.0062297091413777 0.9203045834374074 0.8542951741735536 0.8470826368958511 1.0115633200505554 1.0338530586836954 0.8267315331192022 1.0 12.342019447872383 -3.5403471583615898 0.3001701901090773 1.015455672625775 9.033400436484243e-17 0.30685900518813547 0.08658725380447663 9.956509475540381 0.28229096018785177 0.024618982818152377 4.587619125112863 0.000288172704006525 3.5403471583615898 -1.015455672625775 NYGS(ph)PLISGSTPK ddPTM_A549_PD325901_60min_R1 1 NYGSPLISGSTPK 13 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGS(0.977)PLIS(0.023)GSTPK 156.17 2.3044e-18 9762700.0 7631.5 7260.8 7673.9 8417.9 10140.0 9031.9 8594.1 9182.3 10024.0 9939.2 9292.3 True False 8406.244261986636 7872.693097779815 8194.69700090943 8937.854564562003 9427.801381100953 8958.347200916904 8921.153178371964 8999.151823124997 9602.726139398987 9311.637215765522 8149.40600874297 1.0315161930781362 0.9660450208682341 1.0055575820026477 1.096749205398916 1.156869760935518 1.0992638225787343 1.094699806194591 1.1042708896170335 1.1783344858627542 1.1426154502273749 1.0 12.992479193150517 -6.241778052020627 5.825900560736477 1.0950733201354603 0.9966558279498814 0.4951959125735548 0.04704742471940315 0.17015830115494526 21.122119583273093 0.009268749301129689 0.024093776526567696 5.730888355640442e-07 6.241778052020627 -0.09841749218557894 NYGSPLIS(ph)GSTPK ddPTM_A549_PD325901_60min_R1 1 NYGSPLISGSTPK 13 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGS(0.264)PLIS(0.731)GS(0.004)T(0.001)PK 150.11 8.2774e-13 8530900.0 7743.5 8360.2 9018.5 9312.3 11492.0 10009.0 9626.9 9954.6 11844.0 10176.0 12190.0 True False 8529.61441953659 9064.743394124458 9630.549642646076 9887.499621232228 10684.841565247749 9927.490022473374 9993.256947541815 9756.047693767368 11346.237868619473 9533.485623352972 10690.70727877671 0.7978531445220336 0.847908670375801 0.9008337232995548 0.9248686137783402 0.9994513259622583 0.9286092831464497 0.9347610674347543 0.9125727081813533 1.0613177943001142 0.8917544344590684 1.0 13.38406968198385 -2.8589082138606536 0.25455695583162047 1.0307235756483204 3.4902317638887335e-10 0.339586323308113 0.05680976821640493 12.23677189442418 0.21998730792852772 0.022271482856985707 5.049907744521722 0.0013838588202582883 2.8589082138606536 -1.0307235752992971 NYGSPLISGST(ph)PKHER ddPTM_A549_MK2206_60min_R1 2 NYGSPLISGSTPKHER 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGSPLIS(0.008)GS(0.189)T(0.803)PKHER;NYGSPLIS(0.001)GS(0.221)T(0.778)PKHER 85.855 3.0419e-05 18625700.0 2035.15 2939.3999999999996 2361.7 2445.6 3062.5 2711.4 2698.4 2157.3999999999996 4398.7 3573.7 3766.2 True False 2378.6335653596393 3089.002904807494 2696.6245726167504 3044.772109787157 2612.0103068692174 2998.318548318343 3188.6643513446465 2463.2180567604028 3402.4014732805063 2766.3986879575577 2830.9485981678804 0.8402249220982083 1.0911547128784393 0.9525515844271912 1.0755306937602676 0.9226625692037099 1.0591215079845604 1.126358971479832 0.8701034198764811 1.2018591490790247 0.9771984873720074 1.0 11.46706983897762 -7.514832838236884 0.8732904682637619 1.0844326296865288 0.980367193813262 0.0 0.1074335969122743 0.8981442630197659 1.3705480349729326 0.020322594059923604 0.042039391140079756 3.0560971914575817e-08 7.514832838236884 -0.10406543587326678 NYGSPLISGST(ph)PKHER ddPTM_A549_PD325901_60min_R1 4 NYGSPLISGSTPKHER 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGSPLIS(0.009)GS(0.179)T(0.811)PKHER;NYGSPLIS(0.013)GS(0.195)T(0.792)PKHER;NYGSPLISGS(0.182)T(0.818)PKHER;NYGSPLIS(0.043)GS(0.157)T(0.801)PKHER 157.22 1.6576000000000002e-20 43173600.0 6683.6 6880.599999999999 8081.4 9549.1 9710.099999999999 9577.900000000001 9139.0 8992.8 11158.7 8300.8 9737.4 True False 7362.114151793733 7460.452309467802 8629.852401405997 10138.926219420397 9028.096074026467 9499.900757942629 9486.789646052686 8813.431549284878 10689.738644424537 7776.686071376613 8539.761530464339 0.8620983297402952 0.873613658045806 1.0105495768962953 1.1872610474251857 1.057183627648157 1.1124316204911735 1.110896318616154 1.0320465645140398 1.2517607905432104 0.9106444065954808 1.0 13.059980068369676 -5.912358572845437 3.1374432783382638 1.1132535714929663 0.8646256046156523 0.42784928530736355 0.08996379778061679 0.14568599093755374 2.839536593147561 0.012767788764323334 0.047026050664406786 1.2236055189381419e-06 5.912358572845437 -0.24862796687731403 NYGYNPS(ph)PVKPEGLR ddPTM_A549_MK2206_60min_R1 3 NYGYNPSPVKPEGLR 15 1 E9PRF4;Q15047-3;Q15047 E9PRF4 SETDB1 Histone-lysine N-methyltransferase SETDB1 1 NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR 126.19 2.3515000000000002e-08 153451000.0 4313.9 5535.6 5780.0 4807.8 8701.900000000001 6350.1 6325.2 6026.3 9178.0 7934.9 8571.9 True False 5041.980855271086 5817.338395540713 6599.690913208632 5985.711215830341 7421.8620373372305 7022.0633671447695 7474.406965285042 6880.546479769733 7099.197654254331 6142.400578972611 6443.260657595251 0.7825200815564786 0.9028562873183303 1.0242781200274713 0.9289879044043398 1.1518798372045391 1.089830714650234 1.160034858511317 1.0678671631356422 1.1018020271903586 0.9533062381594031 1.0 12.653575243818999 -5.320515697765732 0.9630000233031476 1.0649457749330822 0.6478355535290518 0.6223888653174898 0.06778235170740067 0.8621437404617278 0.6415213399237165 0.00990673248247519 0.364354485420412 4.780620860717205e-06 5.320515697765732 -0.4171102214040304 NYGYNPS(ph)PVKPEGLR ddPTM_A549_PD325901_60min_R1 4 NYGYNPSPVKPEGLR 15 1 E9PRF4;Q15047-3;Q15047 E9PRF4 SETDB1 Histone-lysine N-methyltransferase SETDB1 1 NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR 145.91 3.4189e-14 288415000.0 18948.5 16840.8 18624.6 19137.6 22768.0 22077.800000000003 21273.7 19793.1 21297.5 21171.500000000004 22171.5 True False 20872.13777085155 18260.033318792728 19888.577354817997 20319.686087356913 21168.854225335945 21898.005716671258 22083.282294915316 19398.31109311342 20402.440139051272 19834.72787684921 19444.54605671843 1.073418618772016 0.9390825203905219 1.0228357759962283 1.0450069663794546 1.0886782424021535 1.126177265995115 1.1357057259398018 0.9976222142975133 1.0492628667976474 1.0200663887443113 1.0 14.24707793423077 -4.91981693199327 21.151983611656604 1.0360694706750575 2.9296493545399143 0.013642170902807504 0.055338070352017245 1994.4988163002106 654753.5096817472 0.007866933430906126 44076.07762054651 1.20277133156828e-05 4.91981693199327 1.8935798838648568 NYILDQTNVYGS(ph)AQR ddPTM_A549_MK2206_60min_R1 3 NYILDQTNVYGSAQR 15 0 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR 199.37 1.5121e-38 21182700.0 4709.799999999999 6586.4 6437.3 5541.6 9148.1 7664.8 7067.0 7140.799999999999 9191.099999999999 8730.2 9134.099999999999 True False 5504.699096445385 6921.619627211027 7350.20593695466 6899.292248771873 7802.426608414791 8475.884048517535 8350.982423270316 8153.030267782839 7109.3305251707225 6758.0417566127735 6865.850881664598 0.801750459093978 1.0081226269704402 1.0705455250395173 1.0048706806605108 1.1364107294044703 1.2344987088421284 1.216306990524917 1.1874755814396845 1.0354624135744548 0.9842977765014194 1.0 12.745222808630839 -5.212461805444048 2.126874392024946 1.066463703056006 0.7071056996508222 0.4588693253039101 0.08855275152626305 0.6886987244695766 3.0797011249864115 0.014482617598585195 0.4919100273499606 6.131097104573487e-06 5.212461805444048 -0.35935800340518387 NYILDQTNVYGS(ph)AQR ddPTM_A549_PD325901_60min_R1 2 NYILDQTNVYGSAQR 15 0 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR 245.39 2.3743e-113 23664000.0 3945.0 3922.3 4599.8 5648.7 5698.3 5864.7 6059.2 5635.3 6129.9 5422.6 5011.5 True False 4345.493495844497 4252.84598631305 4911.9700888444195 5997.607369871509 5298.071066067803 5816.939827635087 6289.786171721467 5522.899520692674 5872.281620301466 5080.216110573294 4395.117270515952 0.9887093400204928 0.9676296955357006 1.117597048387242 1.3646069036896111 1.2054447560726522 1.323500482377851 1.431084948271038 1.256598898450855 1.3360921356285236 1.155877260580334 1.0 12.1016859445324 -5.927611898435936 4.226136674264177 1.215299279046173 0.9812956179075599 0.4412846669155538 0.11593494513687673 0.22137942108092826 7.679255964261923 0.021830780944073837 0.07288766010979415 1.1813758851319285e-06 5.927611898435936 -0.23400366113861304 NYIQGINLVQAK ddPTM_A549_PD325901_60min_R1 1 NYIQGINLVQAK 12 0 B4DLN1;P52815 B4DLN1 MRPL12 39S ribosomal protein L12, mitochondrial 0 156.92 2.3295e-13 1753900.0 2702.1 2618.0 2859.4 3046.2 3300.9 3607.7 2894.8 3392.1 3458.0 3347.0 3426.9 False True 2976.4152028191156 2838.6280478717995 3053.4560789690277 3234.356855577849 3069.0561714867977 3578.320087329121 3004.96319809534 3324.4419044490296 3312.672285518925 3135.6698487974086 3005.4130249089358 0.990351468550417 0.9445051393419746 1.0159855080356377 1.0761771606003638 1.0211761731417233 1.1906250680595039 0.9998503277886043 1.1061514264082757 1.1022352861531566 1.0433407397947974 1.0 11.553347554480998 -5.996390364421639 4.103329902899271 1.0594751918816534 0.9681820164238797 0.3418245420898689 0.053453598773312655 0.19647119639608038 7.766073431423021 0.007936272009247953 0.025062947728961126 1.0083461294258648e-06 5.996390364421639 -0.09129317545777371 NYKVS(ph)PLASDRR ddPTM_A549_PD325901_60min_R1 1 NYKVSPLASDRR 12 2 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 NY(0.001)KVS(0.992)PLAS(0.007)DRR 53.403 0.0046812 2998000.0 919.21 556.62 662.94 718.51 933.05 717.22 985.53 938.79 1030.1 747.78 1007.7 True False 1012.5275225133628 603.5283208580602 707.9310949820685 762.8907308453943 867.515786847756 711.379198113533 1023.0348834527094 920.0650969834917 986.8084792692434 700.5650431830667 883.759288336611 1.1457050985219246 0.6829103001497225 0.8010451537256466 0.863233621319316 0.9816199934719463 0.8049467852863789 1.1575944908915632 1.0410811055974467 1.1166032338133487 0.7927102463631835 1.0 9.787509662544567 -7.756098396224054 24.999961056867917 1.0621810491584232 0.871235990396488 0.17225170405637757 0.1418582214245546 101.3338301942506 474318.9236861222 0.017176827670226606 0.025062459120876783 1.7534831777271817e-08 7.756098396224054 -0.19094505876193513 NYPS(ph)QEELIK ddPTM_A549_MK2206_60min_R1 2 NYPSQEELIK 10 0 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;A0A2R8Y7V5;K7EPC7 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NYPS(1)QEELIK;NYPS(1)QEELIK 144.57 4.2759e-08 19707900.0 5007.700000000001 6402.3 6432.2 6058.0 9112.8 6525.799999999999 5526.2 7148.1 9640.7 7882.2 8039.700000000001 True False 5852.8773334896505 6728.149723565706 7344.3826802665335 7542.210271953954 7772.319191653167 7216.355824524545 6530.239007708561 8161.365065138151 7457.096843034393 6101.605545574354 6043.220605568026 0.9685030078327772 1.1133384270907813 1.2153093788268559 1.2480448363915109 1.2861220364009227 1.1941241757541716 1.0805892145806844 1.3504992780866771 1.2339607189192576 1.0096612293042115 1.0 12.561101892718174 -10.762313473859221 1.0437854230135608 1.0014190456723024 1.194183461688272 0.33144214848476394 0.09943308511759978 0.48146506254433385 0.9424565459976029 0.06673668308828241 0.01750082990956542 1.7285682278649597e-11 10.762313473859221 0.1927644160159696 NYPS(ph)QEELIK ddPTM_A549_PD325901_60min_R1 1 NYPSQEELIK 10 0 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;A0A2R8Y7V5;K7EPC7 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NY(0.001)PS(0.999)QEELIK 58.781000000000006 0.010508 15277000.0 11895.0 11377.0 12452.0 12115.0 15098.0 14128.0 13297.0 13615.0 14966.0 14421.0 14909.0 True False 13102.57164336382 12335.779717584974 13297.067599958842 12863.3160348387 14037.5685652724 14012.946252123467 13803.024611397603 13343.43814423912 14337.031065666934 13510.455598896742 13075.28751593782 1.002086694261426 0.9434423298568815 1.0169617749323439 0.9837883885275377 1.0735954026373515 1.0717122843411826 1.0556574449757012 1.0205082012899864 1.09649834072032 1.033281721906955 1.0 13.674555050171348 -6.748400728140209 24.971894109986646 1.0490243854055343 0.9856600986858315 0.5091694827090333 0.030024410663115265 189.35192434214147 362648.3662523096 0.005513481276714717 0.011422075913524904 1.784839924024332e-07 6.748400728140209 -0.06336428671970284 NYQQNY(ph)QNSESGEKNEGSESAPEGQAQQR ddPTM_A549_MK2206_60min_R1 2 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNY(0.459)QNS(0.459)ES(0.082)GEKNEGSESAPEGQAQQR;NY(0.065)QQNY(0.424)QNS(0.424)ES(0.082)GEKNEGS(0.005)ES(0.001)APEGQAQQR 74.763 9.3494e-06 786250000.0 405.76 728.18 851.6 525.81 730.64 850.28 670.8399999999999 395.41 1462.68 819.37 943.62 True False 474.24236812044677 765.2412516917474 972.3696854132296 654.6334736045078 623.1638238729555 940.2560652298151 792.7229445063898 451.4605783923386 1131.3853154199953 634.2737479228205 709.2931114128764 0.6686126799903352 1.0788787306384875 1.370899660193115 0.9229378702135012 0.8785702466948315 1.325624132112142 1.1176239156296406 0.6364936739524394 1.5950885426848884 0.8942336217806752 1.0 9.470238126118693 -8.771483054789565 24.99993435182342 1.281013981880551 1.0231152192589268 0.013886631476986655 0.27925148532328686 303.7385570008659 756039.8526224428 0.051110441690219666 0.05471993513911039 1.6924542789720061e-09 8.771483054789565 -0.25789876262162426 NYQQNYQNS(ph)ESGEK ddPTM_A549_MK2206_60min_R1 3 NYQQNYQNSESGEK 14 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.972)ES(0.028)GEK;NYQQNYQNS(1)ESGEK;NYQQNYQNS(1)ESGEK 316.12 1.7109999999999995e-156 55809900.0 7252.1 8344.6 8856.800000000001 8330.9 15854.0 15489.4 12967.2 16690.0 16950.2 11676.3 10864.8 True False 8476.07718317797 8769.304497331646 10112.827418703491 10371.970873988314 13521.8976016668 17128.478026968427 15323.172389844458 19055.85861098133 13111.006763907351 9038.615720457461 8166.770306774566 1.0378738307537343 1.0737787605042917 1.2382896835380097 1.2700211325136048 1.6557215513273351 2.0973380398319605 1.876283012041303 2.333340830606434 1.60540902601747 1.1067552264766984 1.0 12.995549936642378 -3.9296800963118623 13.392636469390819 1.4292658235831737 1.1524662167590194 0.0 0.4447140889408086 0.0 0.0 0.06569215063148459 0.0 0.00011757633097182547 3.9296800963118623 -0.2767996068241543 NYQQNYQNS(ph)ESGEK ddPTM_A549_PD325901_60min_R1 2 NYQQNYQNSESGEK 14 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.949)ES(0.051)GEK;NYQQNYQNS(0.997)ES(0.003)GEK 358.73 4.7921999999999975e-229 83648000.0 20736.0 22220.0 27716.0 26140.0 28308.0 25190.0 27410.0 24756.0 24863.0 26318.0 24901.0 True False 22841.103454963606 24092.557381096773 29596.974429847356 27754.608431752677 26319.74373729839 24984.860991717884 28453.10254932753 24262.22215929369 23818.09457341153 24656.27698854203 21838.334860444545 1.0459178138318301 1.103223186889366 1.3552761517296779 1.2709123021107342 1.2052083597715573 1.1440826945543634 1.3028970721052646 1.1109923130283847 1.0906552503026636 1.129036492301507 1.0 14.414575236715542 -8.956240645645966 0.9913072980722785 1.024704008341729 1.2064314861057233 0.24343041092131346 0.09203646279962967 0.32714112608188384 0.6586258803096084 0.021177597604953795 0.02022108060804595 1.1060107657618325e-09 8.956240645645966 0.18172747776399434 NYQQNYQNS(ph)ESGEKNEGS(ph)ESAPEGQAQQR ddPTM_A549_PD325901_60min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NYQQNY(0.002)QNS(0.676)ES(0.329)GEKNEGS(0.617)ES(0.376)APEGQAQQR 91.26899999999999 7.295499999999999e-10 74593000.0 3544.0 3113.2 4250.4 5208.4 5221.7 5119.9 4877.6 4745.8 5338.5 3985.3 4169.0 True False 3903.7842710450914 3375.560289776348 4538.857703731538 5530.111038865364 4854.945805887068 5078.205231897434 5063.219737125135 4651.141295991923 5114.141410133829 3733.667477864448 3656.239429468425 1.067704767795433 0.9232328338702686 1.241400567793624 1.5125133748884105 1.3278522644762685 1.3889148481273685 1.3848162394171404 1.272110698906867 1.3987435748641237 1.0211769633498209 1.0 11.836144833284663 -5.776047075420021 20.849478759842984 1.2574404877279806 0.9954692125446063 0.3353768472807187 0.1527033038673836 31.24051344180189 44592.37188302411 0.02558539073927422 0.08039559180051342 1.6747613301642775e-06 5.776047075420021 -0.26197127518337426 NYQQNYQNS(ph)ESGEKNEGSES(ph)APEGQAQQR ddPTM_A549_PD325901_60min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NYQQNYQNS(0.999)ES(0.001)GEKNEGS(0.105)ES(0.895)APEGQAQQR 152.77 5.0515e-37 68817000.0 4318.2 3773.9 4972.5 4698.9 4580.2 5386.5 5239.9 5324.6 5650.3 4885.7 5117.5 True False 4756.580485109177 4091.939797503203 5309.963752071583 4989.140381023819 4258.502552832206 5342.634129888385 5439.307261883302 5218.396675932107 5412.837540447537 4577.216068201223 4488.079942505316 1.0598252584721075 0.9117350514971039 1.1831259291489982 1.1116424941037935 0.9488473038327931 1.1904052954337627 1.2119452709318268 1.1627236463660489 1.2060474879656462 1.0198606368063377 1.0 12.131882658387047 -7.275932570295431 24.65884387535725 1.1203905447802562 1.0473350785492308 0.17411967593849187 0.0943068036455192 1284.939250413143 2186204.2654318768 0.01624639924658878 0.02604302860119986 5.2974568721682206e-08 7.275932570295431 -0.07305546623102543 NYQQNYQNS(ph)ESGEKNEGSESAPEGQAQQR ddPTM_A549_MK2206_60min_R1 2 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.92)ES(0.08)GEKNEGSESAPEGQAQQR;NYQQNY(0.003)QNS(0.827)ES(0.17)GEKNEGSESAPEGQAQQR 145.79 4.888699999999999e-36 977968000.0 850.51 1534.14 1617.3200000000002 1463.26 2297.69 2051.2599999999998 1736.9299999999998 1636.6 2632.1 2305.8 2091.01 True False 994.0552950269154 1612.2211731582547 1846.6802954585771 1821.7587656882363 1959.7028447315372 2268.322971683812 2052.5076978139114 1868.5930618772948 2035.9335526000011 1784.9181785523513 1571.7545080598522 0.6324494632777995 1.0257461740309266 1.1749164936311134 1.1590606270549115 1.2468250192268016 1.4431789188782365 1.3058704061536257 1.1888580896668495 1.2953254100178302 1.1356214786720253 1.0 10.618160185679693 -5.228584441575718 1.8448579169899646 1.188033672431645 0.42148642787222945 0.7034606046136519 0.10999454392584998 0.5264766731197507 1.6851463957095794 0.020400818407626472 0.7135168150389412 5.907660894445155e-06 5.228584441575718 -0.7665472445594155 NYQQNYQNS(ph)ESGEKNEGSESAPEGQAQQR ddPTM_A549_PD325901_60min_R1 6 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.997)ES(0.003)GEKNEGSESAPEGQAQQR;NYQQNYQNS(1)ESGEKNEGSESAPEGQAQQR;NYQQNYQNS(0.831)ES(0.169)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.89)ES(0.11)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.99)ES(0.01)GEKNEGSESAPEGQAQQR;NYQQNY(0.021)QNS(0.861)ES(0.117)GEKNEGS(0.001)ESAPEGQAQQR 412.16 0.0 1690294200.0 22469.829999999998 25188.51 28607.100000000002 29845.769999999997 32156.300000000003 30521.999999999996 33481.08 35394.3 34329.08 31880.94 31474.7 True False 24750.950600185435 27311.23413678354 30548.54983446696 31689.275428238365 29897.75242121269 30273.43895153685 34755.22082094999 34688.33292020879 32886.34815019144 29867.972007564724 27603.511434562213 0.8966594941683723 0.9894115899539971 1.1066907160303265 1.1480160958275905 1.0831140991641328 1.0967241984159897 1.2590869427370446 1.256663776362007 1.1913827785335533 1.0820352359289764 1.0 14.752564183038327 -5.576736389265323 2.3086718776734103 1.119692764079113 0.8950048057522034 0.5032547038697748 0.07505403582261524 0.30432303784251513 2.8093246875951747 0.013676454241274201 0.10471903088733903 2.6501082294989434e-06 5.576736389265323 -0.22468795832690958 NYQQNYQNSESGEKNEGS(ph)ES(ph)APEGQAQQR ddPTM_A549_MK2206_60min_R1 2 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NYQQNY(0.002)QNS(0.265)ES(0.106)GEKNEGS(0.857)ES(0.77)APEGQAQQR;NYQQNYQNSES(0.013)GEKNEGS(0.988)ES(0.999)APEGQAQQR 128.22 1.1989000000000002e-27 93392000.0 3120.9 3636.1 3557.1 4177.1 6282.0 4819.6 4920.5 5034.4 7153.8 5654.1 5309.9 True False 3647.631621320737 3821.1619589611937 4061.550267711835 5200.489687517144 5357.9261217150815 5329.606873008446 5814.491158016353 5748.041617203385 5533.475722271148 4376.834883057008 3991.3052842152874 0.9138944183864606 0.9573715080309761 1.0175995015400978 1.3029546269196468 1.3423994759069098 1.335304240967445 1.4567893819125677 1.440140808054847 1.3863824809780392 1.0965923604907906 1.0 11.962644915598291 -6.133389039820536 3.8823579047173893 1.2527552373144577 0.9448946169450371 0.5315708408568045 0.13563323754059767 0.21166545344134183 5.544417743742436 0.026024941927363335 0.0745924240183096 7.355479004684655e-07 6.133389039820536 -0.30786062036942063 NYQQNYQNSESGEKNEGS(ph)ESAPEGQAQQR ddPTM_A549_MK2206_60min_R1 2 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNSESGEKNEGS(0.947)ES(0.053)APEGQAQQR;NYQQNYQNSESGEKNEGS(0.997)ES(0.003)APEGQAQQR 409.45 0.0 1493160000.0 16478.300000000003 25740.0 26551.0 26407.0 38414.0 27439.0 27167.0 27854.0 46516.0 37357.0 35698.0 True False 19259.43418424478 27050.056055570858 30316.331044394872 32876.71618545527 32763.35148671811 30342.576767465922 32102.892244656105 31802.389799297453 35980.20027078821 28918.027754436698 26833.201385321267 0.7177464182406647 1.0080815802458896 1.129806712551973 1.225225261546318 1.2210004693901657 1.1307848188425407 1.1963869604548025 1.1851880564908857 1.3408836222751523 1.077695774692613 1.0 14.711731567848938 -5.2926084420086665 1.7014408624281874 1.1740736786153134 0.5766347750853065 0.7208009954984118 0.08281268184571158 0.4960824616848606 1.4492118926155975 0.016839906485549845 0.4712676298412351 5.097902885996666e-06 5.2926084420086665 -0.597438903530007 NYQQNYQNSESGEKNEGS(ph)ESAPEGQAQQR ddPTM_A549_PD325901_60min_R1 3 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNSESGEKNEGS(0.665)ES(0.335)APEGQAQQR;NYQQNYQNSESGEKNEGS(0.994)ES(0.006)APEGQAQQR;NYQQNYQNSESGEKNEGS(0.998)ES(0.002)APEGQAQQR 360.06 1.1090999999999994e-296 1805557000.0 25478.4 23286.8 29646.3 33788.8 35094.3 38210.2 33011.3 33415.1 35237.4 33842.2 32519.5 True False 28064.94841179325 25249.260361031713 31658.276195684237 35875.857436067476 32629.397436762432 37899.02879975142 34267.563085976486 32748.609616861177 33756.494619359335 31705.397716454027 28519.807658095084 0.9840511110118682 0.8853236551847833 1.1100452210342424 1.257927748537408 1.144095985075863 1.3288669143248633 1.2015355607158156 1.1482759634799216 1.1836157881583 1.1116974594130806 1.0 14.799676631610069 -5.819488157627159 6.737397322651135 1.1330729186558253 0.9352397228121728 0.4783159891514456 0.08785085843493887 0.16225104709825866 14.625366407801007 0.015283984647786025 0.048898887144143595 1.515346123701288e-06 5.819488157627159 -0.19783319584365244 NYQQNYQNSESGEKNEGSESAPEGQAQQR ddPTM_A549_PD325901_60min_R1 2 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 299.05 4.0339999999999985e-185 40551000.0 3737.8999999999996 3304.8 2765.8 4033.5 4116.9 4553.0 3933.5 4601.6 4535.0 4631.1 4203.7 False True 4117.368856303457 3583.307094196608 2953.503820106505 4282.640134256861 3827.743146533974 4515.921877542338 4083.1914949937905 4509.8174781146345 4344.409720887311 4338.6915556515305 3686.671549449849 1.1168255162079408 0.9719626622912296 0.8011301740582905 1.1616549173999366 1.0382653011508922 1.2249319791496576 1.1075549964854106 1.2232761767962814 1.178409755958763 1.1768587186181478 1.0 11.848103175168296 -6.296180938747576 24.980678311659272 1.1084366840398623 0.9641716115792354 0.3612575578728773 0.09807187730497625 582.3388154907213 418725.6606566368 0.014966342515543837 0.03477998677474439 5.056139657549053e-07 6.296180938747576 -0.14426507246062692 NYQSQADIPIRS(ph)PFGIVK ddPTM_A549_MK2206_60min_R1 2 NYQSQADIPIRSPFGIVK 18 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4 Q14966-3 ZNF638 Zinc finger protein 638 1 NY(0.001)QS(0.004)QADIPIRS(0.995)PFGIVK;NYQSQADIPIRS(1)PFGIVK 138.82 7.8348e-14 19711100.0 5410.7 7234.6 7166.5 7065.4 11326.1 8206.8 7614.6 8013.299999999999 11681.0 9476.3 9717.9 True False 6323.893881085624 7602.81023852497 8182.817461852874 8796.42331717786 9660.045693593947 9075.23812876705 8998.074255021107 9149.209814702022 9035.272150723991 7335.5972484238155 7304.677229604284 0.8657321442563191 1.040813988017488 1.1202161580377128 1.2042179333438376 1.3224466174143688 1.242387287420047 1.2318236620440737 1.2525139067914248 1.2369160014498628 1.0042329069235558 1.0 12.834604811005427 -5.385824986325913 1.802365964018953 1.1615885738989629 0.8129098768657629 0.48121705555156646 0.09756408757127355 0.5735904273527679 2.256461002801265 0.01698588321019673 0.31010094427807444 4.1131544120219094e-06 5.385824986325913 -0.3486786970332 NYQSQADIPIRS(ph)PFGIVK ddPTM_A549_PD325901_60min_R1 3 NYQSQADIPIRSPFGIVK 18 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4 Q14966-3 ZNF638 Zinc finger protein 638 1 NYQSQADIPIRS(1)PFGIVK;NYQSQADIPIRS(1)PFGIVK;NYQSQADIPIRS(1)PFGIVK 152.88 3.1482999999999996e-18 33600000.0 9755.6 8392.8 9422.9 10639.0 12983.0 11760.1 11292.699999999999 12280.2 11940.2 12466.5 13716.400000000001 True False 10745.981330306864 9100.090710534163 10062.394658500827 11296.14686707791 12071.118868918513 11664.32964464873 11722.44987810255 12035.261777369467 11438.394917163983 11679.3630624538 12029.369755423537 0.8933120810807194 0.7564894001559238 0.8364856067346434 0.9390472731944209 1.0034705985719787 0.9696542613456348 0.9744857890678263 1.0004898030458558 0.950872335768621 0.9709039874834728 1.0 13.55427343814462 -6.322588538002927 3.1530046586393112 0.978736013262381 0.8186068945854291 0.8004902923397945 0.033212817313864496 0.07475410185660275 1.4648338229465085 0.004547750393498329 0.011986805208616004 4.757857844203081e-07 6.322588538002927 -0.1601291186769519 NYS(ph)VGSR ddPTM_A549_PD325901_60min_R1 1 NYSVGSR 7 0 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NY(0.002)S(0.987)VGS(0.011)R 58.246 0.033208999999999995 23247000.0 10250.0 10263.0 11832.0 11120.0 12581.0 12222.0 11635.0 11638.0 13446.0 12848.0 13239.0 True False 11290.572454348814 11127.899028001631 12634.990671595979 11806.857144647654 11697.353962093794 12122.468084191189 12077.776291916296 11405.870960165616 12880.911379724545 12036.7750873466 11610.686928935598 0.972429325108318 0.9584186617132199 1.0882207701344233 1.0168956597411278 1.0074644190898134 1.0440784562005676 1.0402292616999809 0.9823597027442408 1.109401317817239 1.0366979284704616 1.0 13.503165709173418 -5.74295280390917 24.99360218946384 1.0432999341771436 0.965423926703178 0.35381062907500616 0.035813935083854394 221.26647869567623 299144.5505262912 0.006091815247676303 0.023499955315773143 1.8073705277437692e-06 5.74295280390917 -0.07787600747396561 NYS(ph)VGSRPLKPLS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 NYSVGSRPLKPLSPLR 16 2 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 2 NY(0.005)S(0.967)VGS(0.047)RPLKPLS(0.981)PLR;NYS(0.978)VGS(0.022)RPLKPLS(1)PLR 71.17399999999999 0.00099273 17253500.0 4488.4 5024.7 4950.200000000001 5568.5 6076.299999999999 5814.0 5009.8 6201.1 5704.799999999999 5513.4 5238.2 True False 4944.059063814556 5448.149103186182 5286.15033997079 5912.4535980189285 5649.521650097015 5766.652711625553 5200.450680467749 6077.414195831161 5465.047094976389 5165.282983077272 4593.934607685656 1.0762145058710981 1.1859439823264843 1.1506803625648168 1.287013008005684 1.2297784214527914 1.2552753149724722 1.132025404055032 1.3229213549674046 1.1896223089099616 1.1243701585207044 1.0 12.165514605496544 -10.37511120136465 0.8068144545531376 1.0030416992683684 1.2064706184604792 0.2964980074328556 0.07566337207212115 0.34662404260737084 0.41968383014864824 0.04014811408848981 0.012985395804905075 4.215885416063719e-11 10.37511120136465 0.2034289191921108 NYS(ph)VGSRPLKPLSPLR ddPTM_A549_MK2206_60min_R1 4 NYSVGSRPLKPLSPLR 16 2 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NYS(1)VGSRPLKPLSPLR;NY(0.001)S(0.99)VGS(0.009)RPLKPLSPLR;NYS(0.999)VGS(0.001)RPLKPLSPLR;NY(0.001)S(0.961)VGS(0.038)RPLKPLSPLR 86.539 5.0548e-06 34039600.0 5247.0 5937.6 6385.1 7197.799999999999 11011.3 8704.0 8710.5 9221.0 13939.099999999999 11980.3 14010.1 True False 6132.565323166367 6239.798478459883 7290.603192029136 8961.261323121518 9391.552356580904 9625.051502752403 10293.08509946173 10528.104988128154 10781.916106168717 9273.941909320294 10531.00551091068 0.582334262080929 0.5925168752399874 0.6922988678028593 0.8509407115813563 0.8918001559158579 0.9139726964134944 0.9774076263465582 0.9997245730448512 1.023825891554048 0.8806321390404742 1.0 13.362355572451317 -6.228735503194217 0.6744901726341131 1.0111575049016792 0.49124631344158787 0.9151547312826666 0.04484034673265956 0.11075741121702946 0.06712430338258668 0.004013758772498924 0.03445287282275244 5.905606376911379e-07 6.228735503194217 -0.5199111914600913 down NYS(ph)VGSRPLKPLSPLR ddPTM_A549_PD325901_60min_R1 4 NYSVGSRPLKPLSPLR 16 2 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NYS(0.991)VGS(0.008)RPLKPLSPLR;NYS(1)VGSRPLKPLSPLR;NYS(1)VGSRPLKPLSPLR;NYS(0.992)VGS(0.008)RPLKPLSPLR 151.87 1.1422000000000001e-15 89562000.0 13786.2 13793.7 16404.3 15693.1 17743.0 17732.1 16133.3 17098.0 19568.8 16570.8 17636.6 True False 15185.76487513597 14956.143507994366 17517.59444506946 16662.427145383997 16496.79289002703 17587.695656659027 16747.2615599805 16756.96697687849 18746.391388335098 15524.51686000958 15467.41000761882 0.981791060536695 0.9669455649412139 1.1325486578839492 1.0772603258836835 1.0665517292100724 1.1370808459849329 1.0827450459858023 1.083372521231704 1.2119929179546636 1.0036920759430719 1.0 13.916944019646806 -5.754402939395733 24.99326358878283 1.1000260069757637 0.9743682500993731 0.3539350452673262 0.057665003158317615 147.90324760340377 525334.2608642718 0.010064621572201319 0.03734803908377715 1.760342039213367e-06 5.754402939395733 -0.12565775687639058 NYSVGSRPLKPLS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 NYSVGSRPLKPLSPLR 16 2 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NYS(0.002)VGS(0.005)RPLKPLS(0.993)PLR 62.823 0.00072617 22540000.0 5623.7 6030.2 7029.8 7418.0 8355.7 6425.3 5659.0 5306.9 7811.2 7960.5 7350.9 True False 6572.8430737356 6337.1114229333025 8026.7313463103865 9235.41033300668 7126.587598728864 7105.220981231048 6687.167048717518 6059.169326699633 6041.975671923228 6162.217521192643 5525.468655480926 1.1895539516301017 1.146891208340722 1.4526788308442147 1.6714257032017943 1.2897707041844724 1.2859037711096424 1.2102443187482854 1.0965892134216177 1.0934775036557232 1.1152388883936752 1.0 12.43188111989263 -8.068830829889679 1.1866004916634536 1.0400003682368317 1.3589468524800237 0.46360050715943946 0.13296098486287627 0.27548499335342447 0.768991772292206 0.025831945287180268 0.036825536372663975 8.534324856185725e-09 8.068830829889679 0.31894648424319194 NYSVGSRPLKPLS(ph)PLR ddPTM_A549_PD325901_60min_R1 3 NYSVGSRPLKPLSPLR 16 2 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NYSVGSRPLKPLS(1)PLR;NYSVGSRPLKPLS(1)PLR;NYSVGSRPLKPLS(1)PLR 111.45 7.9371e-08 94085000.0 20733.1 19390.300000000003 18568.600000000002 23460.199999999997 27357.9 27025.6 22685.5 25876.1 25460.2 24207.300000000003 25642.1 True False 22837.909049098485 21024.388631263766 19828.776858062636 24909.283272020035 25436.375483631346 26805.512473909115 23548.809116481916 25359.980886092246 24390.196334230455 22678.846946756337 22488.284258664506 1.0155469748786758 0.9349040766933246 0.8817380921544876 1.107656012593435 1.1310945375404071 1.191976771797574 1.047158993795127 1.1276974532337345 1.0845734629502988 1.008473865142398 1.0 14.456885974594044 -6.267681019477013 24.98551431133121 1.0685178826598356 0.9431471495688193 0.4979937302662465 0.06200196512911045 376.65893862506306 1507782.4935056022 0.00987049686550378 0.023470489062302893 5.399070277257203e-07 6.267681019477013 -0.12537073309101632 NYTNS(ph)PEESSK ddPTM_A549_MK2206_60min_R1 2 NYTNSPEESSK 11 0 J3QQU0;A0A3B3ITH3;Q9P2X3-2;Q9P2X3 J3QQU0 IMPACT Protein IMPACT 1 NYT(0.001)NS(0.999)PEESSK;NYT(0.015)NS(0.984)PEES(0.001)SK 90.73100000000001 0.0002982 5719200.0 1519.1 1762.2 1696.2 1439.8 2133.8 2060.8 2289.0 1638.1 2735.8 2067.8 2614.2 True False 1775.4869415708083 1851.8884530352352 1936.7466655682492 1792.5510646350776 1819.9208466277678 2278.872488151672 2704.8816707040824 1870.3056914708536 2116.1456681748728 1600.68254385053 1965.0219917504307 0.9035455832172211 0.9424263243922187 0.985610682068248 0.9122295181227377 0.9261580044743379 1.159718566875511 1.3765147067359733 0.9517988599225781 1.076906862650337 0.8145875977828884 1.0 10.940329743309707 -7.234393294695573 24.489112081411985 1.0661819495738327 0.9361209148435499 0.19305884234392678 0.13147900451705474 677.9576348744484 613862.8230023086 0.016821002910974263 0.02912960800109062 5.829169787642798e-08 7.234393294695573 -0.13006103473028285 NYTNS(ph)PEESSK ddPTM_A549_PD325901_60min_R1 2 NYTNSPEESSK 11 0 J3QQU0;A0A3B3ITH3;Q9P2X3-2;Q9P2X3 J3QQU0 IMPACT Protein IMPACT 1 NYT(0.003)NS(0.997)PEESSK;NY(0.005)T(0.058)NS(0.933)PEES(0.004)S(0.001)K 111.79 2.6594999999999997e-07 5937900.0 3714.2 3179.7 3968.7 3503.5 4558.9 4780.5 4981.4 4089.2 4513.9 4465.1 4937.8 True False 4091.262849750476 3447.6644781581213 4238.039847731826 3719.9032379741966 4238.698591351194 4741.569192969722 5170.96990292667 4007.6376980846585 4324.196480510083 4183.172823981269 4330.481903293164 0.9447592533845319 0.7961387566442215 0.9786531712576747 0.8590044528636304 0.9788052891129342 1.0949287628621522 1.1940864823830226 0.9254484345118739 0.9985485627411812 0.9659832132770555 1.0 12.080311864072769 -6.915845684878934 5.359387108256706 1.0161379515219628 0.8944314605029653 0.37910482349318986 0.07967840260322703 0.1815950816196295 8.79103523288822 0.011308958367635513 0.02163877967714614 1.2138200728849317e-07 6.915845684878934 -0.12170649101899755 NYYEQWGK ddPTM_A549_MK2206_60min_R1 2 NYYEQWGK 8 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 138.1 0.0030179 6026000.0 6552.3 7270.2 6844.5 6644.7 11064.6 8679.8 8598.599999999999 8177.9 12833.5 11010.1 11320.0 False True 7658.1680516453125 7640.222126465078 7815.15301997517 8272.651798291912 9437.011997186988 9598.29067481507 10160.8543179188 9337.142368768378 9926.732740888303 8522.910763153457 8508.931583893682 0.9000152341266022 0.8979061649675313 0.9184646677343432 0.9722315565388941 1.1090713216040007 1.1280253672486222 1.194139853839229 1.0973342865327997 1.1666250507500069 1.001642883024966 1.0 13.05476227727999 -6.5899569510065685 2.8907987222002434 1.096394543131612 0.9062329776223057 0.7054193590599719 0.056107035985663446 0.13852229275165323 2.337505329973773 0.01014204436123787 0.023500726019942027 2.5706505832329287e-07 6.5899569510065685 -0.1901615655093063 PAALVYS(ph)QPEIR ddPTM_A549_MK2206_60min_R1 2 PAALVYSQPEIR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 PAALVYS(1)QPEIR;PAALVYS(1)QPEIR 147.71 5.6092e-12 5953900.0 4129.700000000001 4159.0 4676.7 4547.0 6283.8 4408.5 4388.0 4929.5 7415.8 7195.7 6977.799999999999 True False 4826.692398528712 4370.6753354747125 5339.926383010863 5661.01520412259 5359.461344099525 4875.004543874537 5185.242800808002 5628.271720960606 5736.133140599178 5570.186372369306 5245.019682517081 0.9202429524940098 0.8333000827514968 1.0180946319057924 1.07931248055982 1.02181911003383 0.9294540037903207 0.9886031158456222 1.073069704527706 1.0936342450189647 1.0619953230940362 1.0 12.356732471347662 -5.822167905604728 6.782145029849157 1.0355009549383356 0.8772800470135087 0.5910347921665436 0.048880686913940374 0.10248798907965874 8.985805402978013 0.007628323951802147 0.024360693531947135 1.506024698953071e-06 5.822167905604728 -0.1582209079248269 PAALVYS(ph)QPEIR ddPTM_A549_PD325901_60min_R1 2 PAALVYSQPEIR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 PAALVYS(1)QPEIR;PAALVYS(1)QPEIR 133.32 5.1862000000000005e-08 13773000.0 6486.299999999999 6167.3 7529.5 6697.1 8127.8 6418.5 7782.6 6662.6 8377.8 6878.6 7472.700000000001 True False 7144.784401038317 6687.040015141234 8040.497148561689 7110.764656782353 7556.931367387798 6366.229864046892 8078.771101802131 6529.709216291412 8025.710200584285 6444.284022090783 6553.605273348217 1.0902067034910188 1.0203605094032229 1.226881512266274 1.08501570665233 1.1530952891105362 0.9714088045455939 1.232721649357852 0.996353753993396 1.2246252048811561 0.9833189142925627 1.0 12.67807306597541 -11.170562650309439 1.5799357830916252 1.0001433075708492 1.1256599563229868 0.19441348491031352 0.08909791617054688 0.4834154538316289 2.170540076771392 0.06234657565226029 0.013250287480586827 6.7520764308870985e-12 11.170562650309439 0.12551664875213753 PAAMISQPPT(ph)PPTGQPVREDAK ddPTM_A549_MK2206_60min_R1 4 PAAMISQPPTPPTGQPVREDAK 22 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 PAAMIS(0.006)QPPT(0.985)PPT(0.009)GQPVREDAK;PAAMISQPPT(0.94)PPT(0.06)GQPVREDAK;PAAMISQPPT(1)PPTGQPVREDAK;PAAMISQPPT(1)PPTGQPVREDAK 169.08 1.8958999999999996e-40 56738000.0 12085.099999999999 12695.3 14616.7 13194.3 19494.2 15541.7 16958.4 15325.099999999999 23864.5 22457.7 23674.9 True False 14124.769427672547 13341.436543989457 16689.567849670693 16426.904092314642 16626.62900381058 17186.312378254486 20039.521766914862 17497.479856150396 18459.22885377558 17384.489972449963 17795.768936000404 0.7937150385841707 0.7496971101372337 0.9378390958936372 0.9230791965995591 0.9343023649950476 0.9657527269578668 1.1260834999029123 0.983238202242187 1.0372818910023616 0.9768889467474241 1.0 14.119246651042133 -5.989226006694838 0.7334317926180475 1.0208510567712763 0.7175417214851735 0.7320311636046205 0.051487364505442425 0.44411271601362795 0.2894081502997316 0.007985036352376488 0.09017355312136187 1.025118316208886e-06 5.989226006694838 -0.3033093352861028 PAAMISQPPT(ph)PPTGQPVREDAK ddPTM_A549_PD325901_60min_R1 4 PAAMISQPPTPPTGQPVREDAK 22 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 PAAMISQPPT(0.999)PPT(0.001)GQPVREDAK;PAAMISQPPT(0.981)PPT(0.019)GQPVREDAK;PAAMISQPPT(0.999)PPTGQPVREDAK;PAAMISQPPT(1)PPTGQPVREDAK 150.59 7.4969e-28 79231100.0 18145.8 16542.1 20334.3 20129.800000000003 26790.5 21361.4 22883.399999999998 21564.2 24250.0 23343.6 24736.9 True False 19987.948257768072 17936.160821504986 21714.30787807929 21373.17202790721 24908.827702207593 21187.439840749594 23754.240309276942 21134.08511421235 23230.856831646586 21869.68111215629 21694.41812012892 0.921340602319381 0.8267638579742833 1.0009168145391238 0.985192223619787 1.1481675869009005 0.9766309344379727 1.0949471047226125 0.9741715586556031 1.070821844725676 1.00807871366067 1.0 14.405036270776133 -5.889344079332866 4.66974711827806 1.0345842424973621 0.8750764330001435 0.5388408563537728 0.055576797752343234 0.10323386397606636 3.741446379777758 0.0071118945914468495 0.02362059096486286 1.290196681950054e-06 5.889344079332866 -0.15950780949721866 PAANRAS(ph)GEWDSGTENR ddPTM_A549_MK2206_60min_R1 2 PAANRASGEWDSGTENR 17 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7;Q5HYK7-3;A0A0U1RQN2 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 PAANRAS(1)GEWDSGTENR;PAANRAS(0.996)GEWDS(0.003)GT(0.001)ENR 92.29 1.3559e-06 19170600.0 2713.0 3172.8999999999996 2300.12 2392.99 3888.3999999999996 3087.8 2609.8999999999996 2435.3 4511.2 4538.2 3993.9 True False 3170.888073518268 3334.3870574483585 2626.31160264523 2979.2726574254034 3316.4215109323327 3414.548946484245 3084.0850469072006 2780.5112327934617 3489.4204029060943 3513.017468083214 3002.104403967577 1.0562217854008096 1.1106832437411693 0.8748235401721206 0.9923947526568365 1.1046989260431297 1.137385142892293 1.0273077254845895 0.9261873867939908 1.1623248006613232 1.170184975392733 1.0 11.551758434994152 -6.748927130455482 24.822660321778084 1.069220466350384 1.0062769008729517 0.11845541698269135 0.08667698076242532 411.59776187083276 816550.2805718505 0.013007638627208938 0.026924775297520027 1.7826778548904425e-07 6.748927130455482 -0.06294356547743218 PAANRAS(ph)GEWDSGTENR ddPTM_A549_PD325901_60min_R1 2 PAANRASGEWDSGTENR 17 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7;Q5HYK7-3;A0A0U1RQN2 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 PAANRAS(0.992)GEWDS(0.008)GTENR;PAANRAS(1)GEWDSGTENR 106.86 2.8003e-09 15747700.0 7073.2 6712.9 6289.7 5849.5 7524.1 7279.3 6343.299999999999 6344.2 7373.8 8470.400000000001 8483.5 True False 7791.266056985364 7278.619641924597 6716.556865038641 6210.810329821623 6995.633172735867 7220.019794244226 6584.697752686944 6217.65995407138 7063.904829080231 7935.577498432491 7440.083281337342 1.0472014576139124 0.9782981408531058 0.9027529143237429 0.8347769903867582 0.9402627508597478 0.9704219054045912 0.8850301137359522 0.8356976285020516 0.9494389460396614 1.0665979396142033 1.0 12.861103055041083 -9.666151078909172 1.3446369348337335 0.9888470852620059 0.9236386871886499 0.24140038728139213 0.06406207727838482 0.4970641975439425 1.8248735221565864 0.016163997814518907 0.011705559013403926 2.1569939207388933e-10 9.666151078909172 -0.06520839807335599 PAAPPRPLDRES(ph)PGVENK ddPTM_A549_PD325901_60min_R1 1 PAAPPRPLDRESPGVENK 18 2 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 PAAPPRPLDRES(1)PGVENK 50.055 0.0037356000000000004 15752000.0 3141.0 2551.1 3084.1 3267.4 3581.2 3336.2 3422.5 3131.7 3579.5 3506.8 3913.8 True False 3459.8720077180133 2766.090150086228 3293.4055721998943 3469.2198771961985 3329.6688664693033 3309.0310933135843 3552.7451103638614 3069.2357867288783 3429.0660630465572 3285.3800495257683 3432.4274116223364 1.0079956814243902 0.8058699626742684 0.9594975150962527 1.0107190804528834 0.9700624273057928 0.9640498389300449 1.0350532390966591 0.8941881119863812 0.9990207080375837 0.9571593672749903 1.0 11.74501349549337 -5.988804407827602 24.949354254358912 0.9903131247366821 0.9008705286143751 0.17144007285264085 0.056025712402595955 176.8576766318227 394120.4549707138 0.006643250036034082 0.020629142036846324 1.0261139507014807e-06 5.988804407827602 -0.08944259612230698 PAAS(ph)PAVGEK ddPTM_A549_MK2206_60min_R1 1 PAASPAVGEK 10 0 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 PAAS(1)PAVGEK 120.06 5.4752e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 PAAS(ph)PAVGEK ddPTM_A549_PD325901_60min_R1 2 PAASPAVGEK 10 0 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 PAAS(1)PAVGEK;PAAS(1)PAVGEK 103.91 0.00035965 27629000.0 14646.8 16500.6 16301.7 15184.8 19174.5 17795.6 16607.7 18189.2 17983.5 18524.4 19409.9 True False 16133.732353595728 17891.16347086073 17408.03139208555 16122.730608817048 17827.749268433952 17650.678533712366 17239.71511158215 17826.402136848643 17227.71603430584 17354.766222606122 17022.605349493693 0.9477827877902131 1.051023806493456 1.0226420124698081 0.9471364857375719 1.0472985129132544 1.0368964192803396 1.0127542028749974 1.0472193751104533 1.012049312111806 1.0195129280326238 1.0 14.055164241317089 PAAS(ph)PRPR ddPTM_A549_MK2206_60min_R1 4 PAASPRPR 8 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 PAAS(1)PRPR;PAAS(1)PRPR;PAAS(1)PRPR;PAAS(1)PRPR 99.68799999999999 0.00067016 296448000.0 6906.799999999999 6494.9 7920.4 6390.4 10115.1 7758.199999999999 7881.099999999999 7708.5 11148.9 11606.3 10408.6 True False 8072.498984952441 6825.462668039124 9043.63181816222 7956.048286875956 8627.182189391942 8579.167574523637 9312.993855389232 8801.203481291175 8623.691951134899 8984.42876907457 7823.857357254051 1.03177992853715 0.872390990322792 1.155904486139082 1.0168958767505318 1.1026763136719349 1.0965393645078774 1.1903327770609848 1.124918704343575 1.1022302116920966 1.1483374963047441 1.0 12.933664352311878 -5.760777104408515 24.99998924103324 1.0738884889168845 0.9520854747386095 0.36275418148561556 0.06874710846908313 15.314959784808314 577985.7964462825 0.009843159319957247 0.03407564197620648 1.734694076888409e-06 5.760777104408515 -0.121803014178275 PAAS(ph)PRPR ddPTM_A549_PD325901_60min_R1 4 PAASPRPR 8 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 PAAS(1)PRPR;PAAS(1)PRPR;PAAS(1)PRPR;PAAS(1)PRPR 99.68799999999999 0.00067016 385117000.0 12694.1 10840.599999999999 13823.0 11286.5 15814.900000000001 13269.699999999999 13345.9 13203.1 13912.9 13653.3 13925.3 True False 13982.795687097485 11754.17540708901 14761.111904451589 11983.64147149872 14704.115982443142 13161.635962755006 13853.785527656702 12939.75381286842 13328.189196413023 12791.228307913247 12212.576379749735 1.1449505208649533 0.9624648429285714 1.2086812352656156 0.9812541677421464 1.2040142493458423 1.0777116599720067 1.1343868072447298 1.0595433273460997 1.0913495057859486 1.047381642510994 1.0 13.576079964657467 -10.560609371187262 0.6035277039173385 0.9903434552812713 1.0969565077638053 0.11121323352020818 0.07553014683056002 1.2584141199848426 0.7138091139685012 0.07121956353999213 0.014313236743472508 2.7503668750943472e-11 10.560609371187262 0.10661305248253394 PAASS(ph)PETPSAGQQEAK ddPTM_A549_MK2206_60min_R1 1 PAASSPETPSAGQQEAK 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 PAAS(0.107)S(0.857)PET(0.035)PSAGQQEAK 82.90799999999999 6.5163e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 PAASS(ph)PETPSAGQQEAK ddPTM_A549_PD325901_60min_R1 1 PAASSPETPSAGQQEAK 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 PAAS(0.016)S(0.984)PETPSAGQQEAK 126.48 8.959999999999999e-11 4764300.0 1442.2 1506.6 1514.5 1349.3 1927.1 1436.1 1072.4 1125.8 1855.7 1395.5 1356.7 True False 1588.6110823084746 1633.5664694131597 1617.283077428339 1432.6431965173635 1791.7471441340865 1424.4048777374364 1113.210768839797 1103.3450358269858 1777.711382370582 1307.3878918424798 1189.8345008298907 1.3351529823689292 1.3729358732443655 1.3592504472683469 1.204069301670205 1.5058792990826635 1.1971453817685878 0.9356013530145161 0.9273096679054273 1.4940829007148948 1.0987981025349303 1.0 10.21654520152587 -7.473581390137388 22.748619396171122 1.185701769818866 1.3485574302923786 0.2939960253060223 0.16867621793214826 246.360826098344 113684.35643534093 0.03291893952699157 0.05262330487562693 3.360613826486526e-08 7.473581390137388 0.16285566047351252 PAGAT(ph)LERPK ddPTM_A549_MK2206_60min_R1 2 PAGATLERPK 10 1 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 1 PAGAT(1)LERPK;PAGAT(1)LERPK 94.191 0.00023101 43367000.0 7151.9 6108.9 7174.6 5871.5 10300.9 7410.9 8096.8 7510.1 12041.1 11050.5 10899.2 True False 8358.96587283277 6419.816916778424 8192.066163651667 7310.0177635816535 8785.651255519722 8195.116519042713 9567.883753323205 8574.679673716651 9313.810075685531 8554.18437509444 8192.627837382872 1.0203033799107657 0.7836090011906642 0.9999314415664481 0.8922677691065279 1.0723850063627804 1.0003037708668379 1.1678650541972693 1.0466336130381122 1.1368525777756824 1.0441319372597142 1.0 13.000110564351926 -6.766847032828301 24.87432472626276 1.068071377678824 0.9194196504739975 0.4602440789388763 0.0743508364713321 83.90633700056173 385957.8187952196 0.010941002599068954 0.021111635126053706 1.7106177226473667e-07 6.766847032828301 -0.14865172720482644 PAGAT(ph)LERPK ddPTM_A549_PD325901_60min_R1 3 PAGATLERPK 10 1 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 1 PAGAT(1)LERPK;PAGAT(1)LERPK;PAGAT(1)LERPK 95.417 8.3132e-07 32121700.0 6692.6 6501.4 7976.0 7683.4 8811.0 6847.2 7941.2 8449.0 9141.7 8074.4 9692.0 True False 7372.027825168282 7049.295794665284 8517.299323584306 8157.986167732534 8192.14575629985 6791.438673381927 8243.406711591375 8280.478066887725 8757.506140118094 7564.581006014271 8499.945442650027 0.8673029579905052 0.8293342401110196 1.0020416461554216 0.9597692388469167 0.9637880397672041 0.7989979134812613 0.9698187790981079 0.974180143008791 1.0303014530158874 0.8899564187856555 1.0 13.05323786592762 -8.198727196224223 2.619636823313021 1.0129831790666064 0.9094834043192678 0.09963736342168483 0.06905851409061062 0.2181970013514565 2.947509936571791 0.009754338402095584 0.012693048873322359 6.3280922814557755e-09 8.198727196224223 -0.10349977474733862 PAGGPKPPS(ph)GK ddPTM_A549_PD325901_60min_R1 2 PAGGPKPPSGK 11 1 P50990-2;P50990;P50990-3;H7C2U0 P50990-2 CCT8 T-complex protein 1 subunit theta 1 PAGGPKPPS(1)GK;PAGGPKPPS(1)GK 56.138999999999996 0.0043816 9857900.0 4547.3 4291.2 5679.6 5299.799999999999 6698.1 4574.8 5615.9 5355.4 5020.299999999999 5070.4 5829.0 True False 5008.93854845467 4652.834483967707 6065.051810209307 5627.156609280898 6227.648563190562 4537.544345570104 5829.616147638396 5248.582345769973 4809.314249563521 4750.254078680122 5112.069953075426 0.9798259011384004 0.9101664348643267 1.1864180001215685 1.1007589217153797 1.2182244414405954 0.8876138995007908 1.1403631407921742 1.0267039367511823 0.9407762987809337 0.9292232153087742 1.0 12.319691862782776 -8.554238430101975 7.099201102701406 0.9724523924944816 1.062131674572401 0.16407750528223297 0.10062906447029828 0.27026379420917684 44.6897856395497 0.01652077836924383 0.01883332290607852 2.7910111398036922e-09 8.554238430101975 0.08967928207791942 PAMPQDSVPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 PAMPQDSVPSPR 12 0 P53396 P53396 ACLY ATP-citrate synthase 1 PAMPQDS(0.004)VPS(0.996)PR;PAMPQDS(0.009)VPS(0.991)PR 59.11600000000001 0.0037906 13336900.0 5400.4 5849.2 5792.6 6090.700000000001 7383.2 5588.3 5532.200000000001 5329.3 7351.1 8358.9 9151.2 True False 6311.855492896443 6146.899296046813 6614.077782673414 7582.921773421917 6297.1410604659 6179.65019678668 6537.3291300433075 6084.744595296756 5686.087587294507 6470.618684491823 6878.704479728613 0.917593641578489 0.8936129345520784 0.9615295732161415 1.1023764425072509 0.9154545131315691 0.8983741364377508 0.9503721448288219 0.8845771196056411 0.8266218739373495 0.9406740329607982 1.0 12.747921161120654 -6.931376594761363 24.99999999883682 0.9145541724654035 0.9686442638349863 0.13480430377460761 0.06348189836347706 100.44207916193092 36590.197688515014 0.011476330908045746 0.021688226129590895 1.1711793468993875e-07 6.931376594761363 0.05409009136958276 PAPPPQSQS(ph)PEVEQLGR ddPTM_A549_MK2206_60min_R1 2 PAPPPQSQSPEVEQLGR 17 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PAPPPQSQS(1)PEVEQLGR;PAPPPQS(0.048)QS(0.952)PEVEQLGR 133.86 3.0971e-12 15939000.0 3211.4 3825.7 3690.0 3826.1 4940.0 3865.5 3941.7 3438.9 5638.1 6207.0 5925.6 True False 3753.405808808172 4020.4117891141154 4213.297486114157 4763.494671760153 4213.3325439784285 4274.544644288769 4657.855867808773 3926.3746061895577 4361.079352195613 4804.834389051283 4454.109981759757 0.8426836840982659 0.90262966239682 0.9459347666241376 1.0694604963207852 0.9459426375263862 0.959685472921339 1.045743344210939 0.8815172104570039 0.9791135311105656 1.0787417483465374 1.0 12.120921466537322 -5.664750223382386 2.2780655507476837 0.985392933783551 0.8490502241829025 0.4247606317717716 0.055190877902264505 0.20427314783011483 1.9291746740731461 0.006194777287511339 0.039670949864845304 2.1639627299330345e-06 5.664750223382386 -0.13634270960064843 PAPPPQSQS(ph)PEVEQLGR ddPTM_A549_PD325901_60min_R1 2 PAPPPQSQSPEVEQLGR 17 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PAPPPQS(0.001)QS(0.999)PEVEQLGR;PAPPPQS(0.002)QS(0.998)PEVEQLGR 169.64 8.9295e-30 29504000.0 11108.6 11117.1 12674.2 10769.6 15248.2 11679.3 11677.3 12213.8 13965.3 13532.5 14483.7 True False 12236.336894280903 12053.977032465842 13534.347428155992 11434.813732463788 14177.21903543427 11584.187653059571 12121.686041563738 11970.186177459258 13378.387006638934 12678.055640529094 12702.296719738984 0.9633168838880929 0.9489604359292227 1.0655039578097736 0.9002162352808555 1.1161146167687377 0.9119758346581602 0.9542908899873993 0.9423639237507302 1.053225830085462 0.998091598728581 1.0 13.632801755807009 -8.766062084658255 24.999778196857967 1.025134418602461 0.9768430103441709 0.07857369901512756 0.061899290509408074 180.74801931659212 977489.6089856278 0.009992323414337716 0.010811452925683201 1.7137123058965404e-09 8.766062084658255 -0.048291408258290036 PAPPQEES(ph)PSSEAK ddPTM_A549_MK2206_60min_R1 2 PAPPQEESPSSEAK 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 PAPPQEES(0.58)PS(0.369)S(0.051)EAK;PAPPQEES(0.884)PS(0.116)SEAK 185.12 4.3828e-26 39576000.0 5564.299999999999 6487.700000000001 5974.1 5256.2 9996.0 6592.0 6742.5 6830.9 10714.8 8765.0 8717.7 True False 6503.417805926166 6817.89621879281 6821.317211868456 6543.969235959782 8525.601641621133 7289.561064584544 7967.524973666348 7799.20099375389 8287.914908019644 6784.980412443124 6552.854493719964 0.9924557018866852 1.0404467587868544 1.0409688202913367 0.9986440630157899 1.301051572225781 1.1124252906226766 1.2158861426424403 1.1901990195613807 1.2647793287585591 1.0354236339210068 1.0 12.677907781670278 PAPPQEES(ph)PSSEAK ddPTM_A549_PD325901_60min_R1 2 PAPPQEESPSSEAK 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 PAPPQEES(0.857)PS(0.141)S(0.002)EAK;PAPPQEES(0.984)PS(0.016)SEAK 199.37 2.3456e-31 52712000.0 12449.5 11872.8 14188.8 12131.9 17115.3 13548.2 13773.0 13356.400000000001 12988.4 13982.099999999999 15136.6 True False 13713.3640751625 12873.362523595219 15151.737292185688 12881.259909456017 15913.180372579602 13437.867951091392 14297.139051874792 13089.9961241069 12442.542716377673 13099.267819799881 13274.894158813095 1.0330300122248666 0.969752554678464 1.1413829075335091 0.9703474660778559 1.1987425422910034 1.0122768430639502 1.0770058789796857 0.9860716000825179 0.9372988264555895 0.9867700384717104 1.0 13.69641273796764 -8.355938083352278 4.989111917574014 0.970076151344758 1.057601054626337 0.25409736461960697 0.06580812892037637 0.21325598580242072 8.674163220152268 0.010257385275214066 0.012451536103642422 4.4061767716406446e-09 8.355938083352278 0.08752490328157903 PAPSS(ph)GKDYV ddPTM_A549_MK2206_60min_R1 1 PAPSSGKDYV 10 1 O95832 O95832 CLDN1 Claudin-1 1 PAPS(0.123)S(0.876)GKDY(0.001)V 68.069 0.0035507 5692500.0 3150.1 3635.3 2948.0 3036.3 4020.9 3401.2 2292.9 3941.8 5019.2 5252.2 4197.8 True False 3681.7598674492806 3820.321242378272 3366.07072874378 3780.1936363046866 3429.430936454022 3761.1127264661645 2709.4902502216664 4500.562221256214 3882.359214015397 4065.724372188682 3155.3704066138603 1.1668233497189662 1.2107362211329078 1.0667751468063078 1.1980189800795356 1.0868552640494165 1.1919718580685896 0.8586916593191087 1.4263181944733794 1.2303972953152256 1.2885093818673907 1.0 11.623593656721969 -10.935161276644832 1.2571609103249977 1.0020062744854237 1.1637131245777217 0.0 0.15498977060948227 0.6126884857887648 1.7548051096798867 0.08231716523819929 0.020375031176145173 1.1610173862568298e-11 10.935161276644832 0.16170685009229802 PAPSS(ph)GKDYV ddPTM_A549_PD325901_60min_R1 1 PAPSSGKDYV 10 1 O95832 O95832 CLDN1 Claudin-1 1 PAPS(0.048)S(0.952)GKDYV 66.56 0.0041641000000000004 9822400.0 8939.2 8431.7 8683.7 8337.7 9759.7 9427.7 9019.0 9656.8 8962.5 9665.5 10279.0 True False 9846.70100330877 9142.268950053729 9273.02810133012 8852.700792709422 9074.212341137178 9350.923936943975 9362.222980386166 9464.18754838695 8585.837292933304 9055.218680475446 9014.748163949616 1.0922879734662108 1.0141457957321618 1.0286508211525394 0.9820241932117162 1.0065963215062803 1.0372917542321083 1.038545149583448 1.0498560110902113 0.95242120320881 1.0044893673999316 1.0 13.138071473746676 -8.758865552331436 24.999999499327732 0.9775322345868883 1.0285149370198834 0.3121636167059728 0.029248840669194066 52.79809189444687 512832.61850446725 0.005224264122211581 0.005792910501657465 1.742346180556225e-09 8.758865552331436 0.050982702432995075 PARPS(ph)PSPTGGR ddPTM_A549_MK2206_60min_R1 1 PARPSPSPTGGR 12 1 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 PARPS(0.969)PS(0.016)PT(0.015)GGR 40.278 0.030066000000000002 4048600.0 1102.3 1117.9 807.72 905.88 1100.1 820.64 948.31 882.12 1262.0 1253.9 1383.1 True False 1288.3412913524467 1174.7963350630403 922.2668415946151 1127.8206406664992 938.2767472936576 907.4795801032557 1120.6056518765345 1007.1632113792006 976.159014999887 970.6431191286292 1039.6380983819213 1.2392209302040813 1.1300050824334713 0.8871037364156035 1.0848204220505424 0.902503235264251 0.8728802662346106 1.0778805178654283 0.9687632772853706 0.9389411724321836 0.9336355801497898 1.0 10.021865693284285 -5.573923819240686 4.627925416621795 0.9700368545679207 1.2179491028615266 0.6305422780736971 0.06728457497002281 0.07931327943226184 3.539244554712764 0.0085385132189493 0.03812320200376934 2.6673265063805563e-06 5.573923819240686 0.24791224829360592 PARPS(ph)PSPTGGR ddPTM_A549_PD325901_60min_R1 1 PARPSPSPTGGR 12 1 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 PARPS(0.949)PS(0.042)PT(0.01)GGR 49.482 0.0086719 4855900.0 1702.5 1366.6 1150.1 1612.0 1536.7 1667.4 1277.7 1383.9 1639.1 1648.6 2003.0 True False 1875.3365466857424 1481.7681780831172 1228.1527021131278 1711.5695788823755 1428.7674933272026 1653.8212472247076 1326.3235726842677 1356.2970288514518 1570.214327123791 1544.5071146481644 1756.6436980631456 1.0675679699608214 0.8435223259656452 0.6991473020210498 0.9743407731286269 0.8133507636765183 0.9414665302065474 0.7550327787852803 0.7720956904048834 0.893871835737145 0.8792375575941322 1.0 10.778605882288982 -9.911411345299216 0.9792054283300974 0.9859221792105287 0.8562537588187483 0.03967812986271635 0.10572903428828179 0.5248899728143708 1.026206952091261 0.03402991276039803 0.01891332581526792 1.2262772032171238e-10 9.911411345299216 -0.1296684203917804 PARSVPSIAAATGT(ph)HS(ph)RQT(ph)S(ph)LTSSQLAEEK ddPTM_A549_PD325901_60min_R1 1 PARSVPSIAAATGTHSRQTSLTSSQLAEEK 30 2 Q8IY63-2;Q8IY63 Q8IY63-2 AMOTL1 Angiomotin-like protein 1 4 PARS(0.208)VPS(0.236)IAAAT(0.291)GT(0.317)HS(0.498)RQT(0.499)S(0.499)LT(0.493)S(0.486)S(0.473)QLAEEK 44.107 0.010053 39360000.0 2148.9 2278.8 2024.4 1998.4 1899.4 1417.5 1706.8 1102.2 2298.5 2653.8 2465.8 True False 2367.0547460634302 2470.842473449297 2161.7879577061267 2121.8366293043055 1765.992696574275 1405.9563499706276 1771.7532079967975 1080.2157563408266 2201.9020382490608 2486.2386150996576 2162.522231994061 1.0945805370429742 1.1425743684359417 0.9996604546870914 0.981186041887653 0.8166356259587926 0.650146541464314 0.8192994188841539 0.4995166016604417 1.0182101278185185 1.1496938983175669 1.0 11.07849924923698 -6.0368889213071135 2.1595120025604415 0.9173784726034941 1.1197030620759694 0.2026482933370467 0.1763678030610419 0.49243907172325446 4.424211240070511 0.027152848001440792 0.10561038684529381 9.185675067458795e-07 6.0368889213071135 0.20232458947247522 PART(ph)PPR ddPTM_A549_MK2206_60min_R1 1 PARTPPR 7 1 E7ERS3;Q86VM9;H3BRN6 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 PART(1)PPR 65.305 0.0099491 28319000.0 1782.3 1673.4 2157.5 1406.5 2003.2 2080.0 1817.6 1785.8 2762.5 2852.1 2308.8 True False 2083.1086669486203 1758.5689123307018 2463.4659420843627 1751.0925631401842 1708.5319336229945 2300.1042194077436 2147.8343926045172 2038.9426187831332 2136.7981608060127 2207.8086291305226 1735.4612403616384 1.2003199025721476 1.0133150032000993 1.4194877331694378 1.0090070134757307 0.9844829108755939 1.3253561450490499 1.2376158813877904 1.1748707325542198 1.2312566314421076 1.2721739776052017 1.0 10.761103429164582 -10.860557155916275 1.0830126554651456 0.9990121068671424 1.1787842999885332 0.0 0.15065239359522684 0.6464970825977495 1.333987566085943 0.08851307321044107 0.021026857846149542 1.3786145065912227e-11 10.860557155916275 0.1797721931213908 PART(ph)PPR ddPTM_A549_PD325901_60min_R1 1 PARTPPR 7 1 E7ERS3;Q86VM9;H3BRN6 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 PART(1)PPR 58.433 0.012971000000000002 47182000.0 1440.4 1095.4 1275.8 1273.6 1506.6 1022.2 1162.5 1301.7 1255.9 1329.2 1473.6 True False 1586.6283476335639 1187.7132023066338 1362.3834600086336 1352.2673794445363 1400.7816134878394 1013.8755421093294 1206.739573644409 1275.7365723361052 1203.118890509895 1245.2740851573083 1292.3565419200456 1.2277017186575467 0.9190290479298043 1.0541854479140482 1.0463578243164084 1.0838971816606486 0.7845168954714472 0.9337512787698384 0.9871397953700546 0.9309496655794609 0.9635685236732061 1.0 10.335788427680248 -5.25441156430437 24.71206781634033 0.969899605992415 1.2277018596980878 0.4734422813979855 0.07802512331547848 472.5117731517707 1661453.535327647 0.010518750380748435 0.1451561119912388 5.566579753792287e-06 5.25441156430437 0.2578022537056728 PAS(ph)LGTGK ddPTM_A549_PD325901_60min_R1 1 PASLGTGK 8 0 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 PAS(0.901)LGT(0.099)GK 113.62 0.0013464 30320000.0 9428.8 9126.2 10895.0 9115.1 12766.0 9927.0 10977.0 11839.0 11422.0 11949.0 12548.0 True False 10386.004834884307 9895.296902401687 11634.400216957249 9678.119025105918 11869.360200309144 9846.157803286358 11394.735741844883 11602.861857484175 10941.973061074945 11194.538100770897 11004.675548325684 0.94378110370228 0.8991902449961113 1.0572233743617616 0.8794551899877142 1.0785742976416073 0.8947249521394941 1.0354449517213205 1.0543574689259696 0.9943021957371311 1.017252898698508 1.0 13.425828990319877 -5.24908295999788 0.544643012664501 1.0014595345863186 0.8734641583846771 0.13797409557323037 0.06321733552584874 5.513090207122156 1.07182171446696 0.010266083739837945 0.4471914396997972 5.63529998660323e-06 5.24908295999788 -0.1279953762016416 PAS(ph)PDRFAVSAEAENK ddPTM_A549_MK2206_60min_R1 4 PASPDRFAVSAEAENK 16 1 G3V331;O15037 G3V331 KHNYN Protein KHNYN 1 PAS(1)PDRFAVSAEAENK;PAS(0.98)PDRFAVS(0.02)AEAENK;PAS(1)PDRFAVSAEAENK;PAS(0.988)PDRFAVS(0.012)AEAENK 141.78 8.8719e-15 74174000.0 9966.8 10807.8 10942.4 9012.2 14076.6 11951.3 11431.000000000002 11113.0 15935.099999999999 14523.9 16638.0 True False 11648.952175135222 11357.870856153786 12494.196859635655 11220.189404573035 12005.95078715927 13215.97863336912 13507.864734739347 12688.301782135155 12325.825293125748 11242.940902713377 12506.325414560342 0.9314448320346012 0.9081701043002223 0.999030206353773 0.8971611590651608 0.959990276055146 1.056743543389857 1.080082621152091 1.0145507462458117 0.9855672937132718 0.8989803583412211 1.0 13.61037034132138 -7.011497661707547 24.272676095039817 1.0061141863970824 0.935735661349148 0.3256769926384675 0.048911343422199806 284.93890752117693 601536.1441852287 0.005744260266728969 0.010333028318362266 9.738730287611844e-08 7.011497661707547 -0.0703785250479344 PAS(ph)PDRFAVSAEAENK ddPTM_A549_PD325901_60min_R1 4 PASPDRFAVSAEAENK 16 1 G3V331;O15037 G3V331 KHNYN Protein KHNYN 1 PAS(1)PDRFAVSAEAENK;PAS(1)PDRFAVSAEAENK;PAS(1)PDRFAVSAEAENK;PAS(0.999)PDRFAVS(0.001)AEAENK 211.17 9.849600000000002e-47 112471200.0 18241.3 17870.600000000002 20405.7 19698.300000000003 22707.7 18252.699999999997 20150.3 21181.0 20728.1 22910.399999999998 23418.899999999998 True False 20093.143347464695 19376.618178876153 21790.553511442355 20915.01925291483 21112.78948931223 18104.056062863398 20917.130693167255 20758.528338826938 19856.970040909437 21463.83343408667 20538.523764638536 0.9783148768491016 0.9434279893201063 1.0609600651512967 1.01833118546351 1.027960418735762 0.8814682238279172 1.018433989359088 1.0107118007462244 0.966815836837186 1.0450523942252001 1.0 14.326044869191293 PAS(ph)PKKPPPGER ddPTM_A549_MK2206_60min_R1 1 PASPKKPPPGER 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PAS(1)PKKPPPGER 54.501000000000005 0.006718300000000001 8339600.0 1787.5 2280.5 2386.7 1849.3 2560.3 1739.1 1462.7 1383.7 3107.7 3427.3 3206.0 True False 2089.186299820827 2396.567709196944 2725.169948538933 2302.378583018232 2183.6832616089005 1923.1304076788485 1728.4536565045269 1579.8437124035281 2403.8109119771375 2653.0705496367723 2409.8617189013376 0.866932024951744 0.9944834968744787 1.1308407976957888 0.955398629290602 0.9061446324830819 0.7980252114032538 0.7172418412839611 0.6555744257076224 0.9974891476648882 1.1009223180018455 1.0 11.234734649715293 -5.23316019583679 21.19529000334186 0.9467368255230357 0.866931156206112 0.0 0.1435400928369238 4508.6810402717665 3378824.8373183343 0.020640462294614463 1.8600045504645992 5.845744155944183e-06 5.23316019583679 -0.07980566931692368 PAS(ph)PKKPPPGER ddPTM_A549_PD325901_60min_R1 4 PASPKKPPPGER 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PAS(1)PKKPPPGER;PAS(1)PKKPPPGER;PAS(1)PKKPPPGER;PAS(1)PKKPPPGER 63.062 0.0014854 161832000.0 23486.899999999998 19584.3 24463.1 25924.7 32546.1 30356.8 28846.0 27313.0 28022.7 28099.2 30379.100000000002 True False 25871.27279785807 21234.737692106817 26123.313074570604 27526.00983973444 30260.174213949667 30109.58428556497 29943.750315136866 26768.220788366016 26845.003370564264 26325.01171656052 26642.663288981603 0.9710467950310901 0.7970200824813449 0.9805068206290855 1.0331553396584852 1.1357788778745754 1.1301266678552049 1.1239022912367949 1.004712648207221 1.007594589151541 0.9880773341247587 1.0 14.701450685748211 -5.96193802001692 6.755721878624724 1.0316018369031688 0.8837317939409384 0.47210245635164194 0.06636490271703636 0.14040850994752035 17.82449301163337 0.009836953051045972 0.030766003453901798 1.0915961115823595e-06 5.96193802001692 -0.14787004296223039 PAS(ph)PVAGSPK ddPTM_A549_MK2206_60min_R1 1 PASPVAGSPK 10 0 K7EN91;Q13057;Q13057-2 K7EN91 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase 1 PAS(1)PVAGSPK 78.548 0.0013233 8733500.0 5506.8 4939.8 4987.1 4622.2 6729.2 5245.0 5751.9 5553.0 8038.9 7766.2 7878.3 True False 6436.213211666197 5191.21472040827 5694.345770460688 5754.639207498442 5739.343594117341 5800.022418650777 6796.945776200441 6340.154755349272 6218.101985485412 6011.810026139851 5921.900679981418 1.0868492329537673 0.8766129323912537 0.9615740077691671 0.9717554411122781 0.9691725519002373 0.9794190635883776 1.1477642303554758 1.0706283502493943 1.050017945506125 1.0151825150432472 1.0 12.531844579010743 -7.551046714696467 24.99966649163815 1.0381154904558256 0.9678212530395222 0.30692960040839423 0.05857649412262236 227.70902908612425 202095.70164147703 0.008943910830245812 0.013266089968962834 2.8115983857793812e-08 7.551046714696467 -0.07029423741630347 PASGPIRPIVR ddPTM_A549_MK2206_60min_R1 2 PASGPIRPIVR 11 1 P26373;P26373-2;J3QSB4 P26373 RPL13 60S ribosomal protein L13 0 ; 87.568 0.00031052 4787700.0 1743.87 1576.62 2089.17 1643.8899999999999 2689.8999999999996 1794.74 1764.3899999999999 1748.97 3084.0 2970.8999999999996 2722.6 False True 2038.1926224719136 1656.8632237115032 2385.445720613853 2046.6431237970262 2294.219273288983 1984.6581955480067 2084.9568243659137 1996.8918534959885 2385.478924136016 2299.77162662034 2046.503280062628 0.9959390939307656 0.809606923112676 1.165620277208084 1.0000683330125881 1.1210435358885789 0.969780119525277 1.0187898767023276 0.9757579540428973 1.165636501722594 1.1237566286969067 1.0 10.998945263745208 -5.759540210011223 24.999941230137495 1.063667951391131 0.9027730227946111 0.36012916408956075 0.08074090421327453 39.0098951413864 513468.4536079725 0.011528183780917484 0.04054749863711681 1.7396416224307154e-06 5.759540210011223 -0.16089492859651977 PASGPIRPIVR ddPTM_A549_PD325901_60min_R1 2 PASGPIRPIVR 11 1 P26373;P26373-2;J3QSB4 P26373 RPL13 60S ribosomal protein L13 0 ; 97.734 0.00028119 18114800.0 3458.2 2964.9 3075.0 2804.7 4197.799999999999 3051.3 3135.3 3606.1000000000004 3680.5 4279.3 3976.8999999999996 False True 3809.2739182077135 3214.762528317456 3283.6879914771507 2977.939949064143 3902.9610096238225 3026.4512244552916 3254.6155572019916 3534.1735065692783 3525.821384283516 4009.1042676900925 3487.766511646193 1.0921814592484782 0.9217252696196451 0.941487333086205 0.8538243426331263 1.1190430886331497 0.8677333228441473 0.9331517882101126 1.013305648405111 1.0109109576315536 1.149476105783765 1.0 11.768087746862598 -8.274978896573161 23.16027890234052 1.0059078572718265 0.9573558908526452 0.11738782707031958 0.08837182102615079 554.7242438787503 948892.2138059684 0.01165092271631816 0.014132797942620236 5.309102418261733e-09 8.274978896573161 -0.04855196641918136 PASHSHAHQHS(ph)PISPR ddPTM_A549_MK2206_60min_R1 2 PASHSHAHQHSPISPR 16 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;H7C0P3;H7C1J7;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 PASHSHAHQHS(0.999)PIS(0.001)PR;PASHSHAHQHS(0.997)PIS(0.003)PR 67.645 0.00049592 9392900.0 299.75 250.89000000000001 295.78999999999996 226.39999999999998 177.23 514.15 452.42999999999995 80.939 444.41999999999996 291.2 525.84 True False 350.3404718161078 263.6592293621667 337.7374697608963 281.8680101634823 151.15970177516138 568.5570117348514 534.6306746512226 92.41235111529168 343.75957959290764 225.41771775281674 395.2594155542983 0.8863557907274703 0.6670536336052109 0.854470397086594 0.7131215578209573 0.38243162800607844 1.4384401468021362 1.3526070565617643 0.23380177037831157 0.8697062386504594 0.5703032208270071 1.0 8.6266560194974 -7.230267288600272 24.99796991782783 0.9440765565534721 0.7080525731705911 0.08479068367894005 0.3337274047892188 1196.4660170063055 959487.7556402948 0.04606509280406673 0.07978195065525406 5.884813602325084e-08 7.230267288600272 -0.236023983382881 PASLGT(ph)GK ddPTM_A549_PD325901_60min_R1 1 PASLGTGK 8 0 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 PAS(0.218)LGT(0.782)GK 125.16 3.4766000000000003e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 PASTSQPDPS(ph)PDR ddPTM_A549_MK2206_60min_R1 2 PASTSQPDPSPDR 13 0 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 PAST(0.001)S(0.001)QPDPS(0.998)PDR;PAST(0.002)S(0.001)QPDPS(0.997)PDR 70.54 0.002725 3009800.0 1277.1 1132.6100000000001 1264.77 1405.37 1643.6999999999998 1849.76 1525.4 1434.84 1978.65 2064.3900000000003 2178.4 True False 1492.6432579027564 1190.2550112315507 1444.1334042039573 1749.685713089457 1401.9139073962228 2045.500375428686 1802.545434902582 1638.232964013209 1530.488934254775 1598.0428652188778 1637.4431592185506 0.9115695097563581 0.726898521350558 0.88194414326611 1.068547450480341 0.8561603494470421 1.2492038968881678 1.1008293171915808 1.0004823402816836 0.9346821754626168 0.975937916514625 1.0 10.677229111717178 -6.046739999409213 5.900975353235231 0.9970574212699993 0.8151472054146031 0.3673741436443293 0.10480805822887085 0.164699456172317 14.287295411694725 0.01458589628824796 0.040412242685507714 8.979662221800565e-07 6.046739999409213 -0.18191021585539624 PASTSQPDPS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 PASTSQPDPSPDR 13 0 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 PASTSQPDPS(1)PDR;PAS(0.002)T(0.016)S(0.013)QPDPS(0.968)PDR 82.36200000000001 0.00053675 4868900.0 2012.71 2000.5 2630.5 2168.51 2521.4 2555.3999999999996 2135.5 2259.86 2250.3999999999996 2704.6 2652.5 True False 2217.038837521211 2169.0891557553605 2809.0215484815103 2302.4539376564644 2344.305562357784 2534.5896696401696 2216.767621090439 2214.7853194741265 2155.823513976805 2533.8310944300756 2326.2593155828736 0.9530488809523388 0.932436526411875 1.2075272647656974 0.9897666705655107 1.0077576247213818 1.0895559461758013 0.9529322918734879 0.9520801505825176 0.926733962776904 1.0892298538932201 1.0 11.183796212278402 -7.793217556307323 24.815716720025588 0.9624620024580028 1.0308076160154807 0.044844871663636376 0.08066453860121658 241.836903960648 188850.7337431665 0.011174151176650928 0.015440078386475544 1.6098389973334627e-08 7.793217556307323 0.06834561355747781 PASVDGSPVS(ph)PSTNR ddPTM_A549_MK2206_60min_R1 2 PASVDGSPVSPSTNR 15 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 PASVDGS(0.008)PVS(0.918)PS(0.062)T(0.013)NR;PASVDGS(0.001)PVS(0.679)PS(0.16)T(0.16)NR 154.19 2.219e-19 23820000.0 4792.8 5877.3 6124.3 5299.799999999999 7172.8 5649.1 5043.799999999999 6439.8 7178.1 7597.099999999999 7715.299999999999 True False 5601.707467290214 6176.429466022013 6992.817830408931 6598.251237917059 6117.690621750703 6246.88401243091 5960.193171995305 7352.661371060375 5552.271811070274 5880.909833584901 5799.378078552554 0.9659152052884132 1.0650158314154206 1.2057875406106033 1.1377515224121917 1.0548873584178522 1.0771644696753495 1.027729713645931 1.2678361837198067 0.9573909022424084 1.0140587066281936 1.0 12.501682479540882 PASVDGSPVS(ph)PSTNR ddPTM_A549_PD325901_60min_R1 2 PASVDGSPVSPSTNR 15 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 PASVDGSPVS(0.95)PS(0.049)T(0.001)NR;PASVDGS(0.003)PVS(0.996)PST(0.001)NR 181.19 3.5944999999999996e-33 27571000.0 10688.9 9335.6 10165.4 10663.4 12138.8 9262.8 9340.2 10411.8 11348.8 12163.9 11723.099999999999 True False 11774.029259247714 10122.343775291045 10855.28517351604 11322.053999661483 11286.212564586614 9187.366827871558 9695.646422153559 10204.128481100905 10871.849402515089 11395.869278095837 10281.233018853747 1.145196226722658 0.9845457015446172 1.0558349522483923 1.1012350346402104 1.0977489318537896 0.8936055442984071 0.9430431548797369 0.9925004581054191 1.0574460653287663 1.1084146480483485 1.0 13.327725675551301 -5.2506695486804755 24.09441325655335 1.020680290722237 1.14519634531607 0.22035317693420853 0.06565511579484469 1041.481951928472 2329943.68138237 0.008563797723555703 0.16629099508041817 5.614750355599773e-06 5.2506695486804755 0.12451605459383308 PAT(ph)PGASSVEQLRK ddPTM_A549_MK2206_60min_R1 2 PATPGASSVEQLRK 14 1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 PAT(1)PGASSVEQLRK;PAT(1)PGASSVEQLRK 126.46 1.4417e-07 122982000.0 8644.0 7772.4 9304.400000000001 7968.8 13795.9 9938.099999999999 11219.5 10225.4 16213.9 13857.7 13626.400000000001 True False 10102.895874490203 8167.981961395447 10623.903829214256 9921.156357733027 11766.541385318225 10989.743145623126 13257.937922439685 11674.881763974148 12541.477538277866 10727.235945409366 10242.588810491956 0.986361559700741 0.7974528815438345 1.0372283829583886 0.9686180458177067 1.1487858785530094 1.072945848843002 1.2943932601159356 1.139837006052125 1.2244441098163632 1.0473168594272733 1.0 13.322292781608654 -6.4272534026299555 1.4787262409268045 1.125739464013473 0.9057189356412462 0.46502766503990756 0.09436319942885252 0.3235419304457799 1.3495361742617773 0.01611609717716287 0.0545325678314627 3.738923654782861e-07 6.4272534026299555 -0.22002052837222685 PAT(ph)PGASSVEQLRK ddPTM_A549_PD325901_60min_R1 2 PATPGASSVEQLRK 14 1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 PAT(0.978)PGAS(0.019)S(0.002)VEQLRK;PAT(1)PGASSVEQLRK 193.3 3.0195e-27 182816000.0 10282.8 9630.2 10985.5 9628.8 13069.3 10504.2 11151.3 11412.400000000001 11695.9 11491.099999999999 11745.7 True False 11326.702286202726 10441.770751189837 11731.042091177964 10223.549107408568 12151.357454637338 10418.657277856415 11575.668823725497 11184.770729145392 11204.361996587859 10765.549984916608 10301.053362126962 1.0995673828704433 1.0136604854004774 1.1388196603571168 0.9924760845329325 1.1796228043350632 1.0114166883322668 1.1237364196446946 1.0857890291363328 1.0876908994357817 1.045092148002788 1.0 13.330504251192377 -10.66313658959451 0.8481013747796642 0.9980520412304109 1.0808876093899369 0.12425863681570226 0.05587022618519972 0.6846225836977043 0.8450107110601224 0.036311516265867864 0.008824243978820086 2.172017951878181e-11 10.66313658959451 0.08283556815952597 PATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLREER ddPTM_A549_PD325901_60min_R1 4 PATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 34 2 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 PATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;PATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;PATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;PATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER 230.95 4.160599999999999e-116 224695000.0 5436.5599999999995 4254.219999999999 5208.389999999999 5732.53 6490.55 6481.82 5723.15 5895.36 6537.64 6238.23 6024.75 True False 5988.475569016059 4612.738049586385 5561.862665993392 6086.615358579764 6034.67615918193 6429.034206960573 5940.947605077848 5777.772419979546 6262.885726055506 5844.34709317701 5283.743944036912 1.133377323436441 0.8730055995223226 1.0526366767394846 1.1519512343986598 1.142121235074705 1.2167573362854203 1.124382193384416 1.0934997004349882 1.1853121181475168 1.1060996057109806 1.0 12.36734483837419 -5.998947511924658 24.999635803340595 1.1086741681348495 0.9930988739356276 0.26358841136334155 0.07800996733710713 42.2638406068753 1003764.385128666 0.012356935686760221 0.037981646741521616 1.0024263822652961e-06 5.998947511924658 -0.11557529419922197 PATS(ph)TPDLASHR ddPTM_A549_MK2206_60min_R1 2 PATSTPDLASHR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PAT(0.002)S(0.972)T(0.026)PDLASHR;PAT(0.082)S(0.802)T(0.116)PDLASHR 151.99 5.721600000000001e-13 55238000.0 3070.7 3006.4 3231.2 2097.5 3558.8 2990.6 2558.7 3103.8 4672.7 5400.6 4801.3 True False 3588.959088592903 3159.4129186273576 3689.432747190263 2611.3875941603533 3035.3052343138534 3307.063307000386 3023.5826696507365 3543.7731549888485 3614.3409107685966 4180.600709120401 3609.0047008611955 0.9944456674541019 0.8754249940083053 1.0222853814265953 0.7235755590834263 0.841036653011163 0.9163366581958846 0.8377885096490001 0.9819253364073532 1.0014785821437495 1.1583805108712684 1.0 11.817385307061743 -8.382516305488279 5.575835895725459 1.0002086336630933 0.8852727076438339 0.36964247378107573 0.08904300884106812 0.19237451365584027 8.09100337018535 0.011891221421162971 0.014391972436758244 4.144610229002831e-09 8.382516305488279 -0.1149359260192594 PAVEASTGGEATQETGKEEAGKEEPPPLT(ph)PPAR ddPTM_A549_MK2206_60min_R1 2 PAVEASTGGEATQETGKEEAGKEEPPPLTPPAR 33 2 Q9C0C2;E9PKK0;E9PKE7 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 PAVEASTGGEATQETGKEEAGKEEPPPLT(1)PPAR;PAVEASTGGEATQETGKEEAGKEEPPPLT(1)PPAR 248.48 6.151299999999999e-149 156328000.0 17380.300000000003 13713.199999999999 16288.8 12964.2 20124.8 14303.5 12564.2 11510.0 20017.3 19066.4 19860.4 True False 20313.669732462065 14411.143306187028 18598.796772849942 16140.429581985052 17164.468579161356 15817.086876105124 14846.952506360953 13141.577747896667 15483.413511059616 14759.286997810099 14928.514560844706 1.3607294717548006 0.9653434203015305 1.2458571612765712 1.0811812197523671 1.149777394743696 1.0595218172336458 0.9945364922845252 0.8803004273690491 1.0371704062017215 0.9886641391985197 1.0 13.865782998985795 -7.4041027983122625 2.4923384425273345 1.0041038232300599 1.1520871957059151 0.41693513259151915 0.09963172050910717 0.24473196750336235 2.9693175963270657 0.0139111380331279 0.023437545586974636 3.9436394434704405e-08 7.4041027983122625 0.14798337247585525 PAVEASTGGEATQETGKEEAGKEEPPPLT(ph)PPAR ddPTM_A549_PD325901_60min_R1 1 PAVEASTGGEATQETGKEEAGKEEPPPLTPPAR 33 2 Q9C0C2;E9PKK0;E9PKE7 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 PAVEASTGGEATQETGKEEAGKEEPPPLT(1)PPAR 119.03 1.8196e-21 59766000.0 6550.4 6523.6 6619.1 7335.8 8545.5 7183.3 9055.7 8471.0 12207.0 15061.0 15529.0 True False 7215.391785850391 7073.366666576194 7068.311929881754 7788.915705189406 7945.293560374574 7124.801586415525 9400.31961896918 8302.039259629053 11693.982240985983 14110.045889673665 13619.031446441637 0.5298021239047523 0.5193736936721968 0.5190025412364073 0.5719140700878904 0.5833963737891589 0.5231503880752904 0.6902340783878052 0.6095910191761984 0.8586500653129318 1.0360535508830417 1.0 13.733336485461722 -8.780688426179168 0.7178791198683533 0.9760916083194805 0.5307993014923584 0.9279060574217003 0.050291805776404956 0.09167549588458951 0.09944394320715923 0.012643130952067675 0.012673163728636583 1.6569582808384973e-09 8.780688426179168 -0.44529230682712206 down PAVVLPSAAPAGAAAPPS(ph)GSR ddPTM_A549_MK2206_60min_R1 3 PAVVLPSAAPAGAAAPPSGSR 21 0 P19419 P19419 ELK1 ETS domain-containing protein Elk-1 1 PAVVLPS(0.001)AAPAGAAAPPS(0.5)GS(0.5)R;PAVVLPS(0.006)AAPAGAAAPPS(0.497)GS(0.497)R;PAVVLPS(0.015)AAPAGAAAPPS(0.492)GS(0.492)R 80.638 5.6773e-06 1812400.0 904.87 683.22 1037.8 797.36 1258.5 752.32 583.74 744.62 1065.2 1140.4 1845.2 True False 1057.5899340525152 717.992979731434 1184.9756452816455 992.7132357948508 1073.3763171248695 831.9300030504011 689.7980019470517 850.1721653031111 823.9339007748648 882.7828479578025 1386.9859150707266 0.7625094981577989 0.5176642184537407 0.854353048870882 0.7157341866331998 0.7738912886293693 0.5998114285161854 0.4973359818955889 0.6129638059516691 0.5940463358871599 0.6364757120931446 1.0 10.437737421739039 -10.749700576469001 0.9739485812450009 1.002333864989179 0.6554183201190434 0.0 0.14853998511175792 0.3166257201842463 0.5277742825944957 0.07668046596340561 0.019095363391808392 1.7795058642440223e-11 10.749700576469001 -0.34691554487013565 PCSEETPAIS(ph)PSK ddPTM_A549_MK2206_60min_R1 3 PCSEETPAISPSK 13 0 P33316-2;H0YNJ9 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 PCSEETPAIS(0.982)PS(0.018)K;PCSEETPAIS(0.992)PS(0.008)K;PCSEETPAIS(0.924)PS(0.076)K 201.08 1.4190999999999999e-30 69431700.0 11478.8 12065.1 12878.199999999999 11058.7 19561.1 13908.199999999999 13614.0 14706.300000000001 20741.7 17240.9 18323.2 True False 13416.140810284374 12679.162055791287 14704.522408042107 13768.081996443907 16683.68810243248 15379.956492484034 16087.487577529662 16790.963061154886 16043.738067688708 13346.168715674918 13773.043745406434 0.9740868509735843 0.9205780719327217 1.0676305600892568 0.9996397492773388 1.2113290577470792 1.116670851903272 1.1680415654597147 1.2191178196725747 1.1648651063814122 0.9690064855944506 1.0 13.749559799672737 -6.077917717182258 1.6091822272286656 1.1062133933394296 0.947174161517086 0.35105934599380484 0.08216270548141444 0.3922342942442971 1.8616144027224926 0.012940582958883552 0.05921079795326277 8.357613492427491e-07 6.077917717182258 -0.15903923182234359 PCSEETPAIS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 PCSEETPAISPSK 13 0 P33316-2;H0YNJ9 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 PCSEETPAIS(0.997)PS(0.002)K;PCSEETPAIS(0.998)PS(0.002)K 195.78 2.544e-30 143904000.0 17917.0 17790.2 20115.1 20071.2 21477.0 21595.0 22959.0 22799.0 22105.0 21444.0 22410.0 True False 19735.92065020174 19289.44258871233 21480.231647922606 21310.952438997472 19968.529611627728 21419.13747979944 23832.717308646872 22344.256059530508 21176.00372220818 20090.022180344065 19653.712068694505 1.0041828526448284 0.981465614296731 1.0929350940343467 1.084322003116282 1.0160182230121648 1.0898265632942186 1.2126318542444159 1.1368974970953016 1.0774556810536806 1.0221998831632697 1.0 14.26251420487403 -4.067796143725025 12.528988908279548 1.0568108561252139 1.005085460202869 0.0 0.0666116062519227 0.0 0.0 0.009559901861363003 0.0 8.55468172352909e-05 4.067796143725025 -0.05172539592234493 PCSEETPAIS(ph)PSKR ddPTM_A549_MK2206_60min_R1 5 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 PCSEETPAIS(0.993)PS(0.007)KR;PCSEETPAIS(0.988)PS(0.012)KR;PCSEETPAIS(0.853)PS(0.147)KR;PCSEET(0.001)PAIS(0.972)PS(0.027)KR;PCSEET(0.011)PAIS(0.978)PS(0.01)KR 176.04 2.9589000000000005e-23 2348911500.0 17300.010000000002 18653.499999999996 20727.1 18194.000000000004 26414.7 20095.399999999998 21146.5 19191.1 30711.3 26884.100000000002 27927.600000000002 True False 20219.8287433641 19602.88347445962 23666.514451066887 22651.530816759696 22529.132621341516 22221.881889753073 24988.54532527036 21911.497195278855 23755.23958586848 20810.96313818167 20992.40615745136 0.9631972910445509 0.9338083175139729 1.1273845538981409 1.0790345159513512 1.073203922045148 1.058567642178803 1.1903611781253836 1.0437820719994624 1.131611088681058 0.9913567307192516 1.0 14.357579917902779 -5.750962819001891 24.99627394463077 1.0755158432906269 0.9485027398007404 0.44677688990224995 0.055231545993712286 152.54195194503305 363945.8148222721 0.008020589822710358 0.030397631495126438 1.774341380033084e-06 5.750962819001891 -0.12701310348988648 PCSEETPAIS(ph)PSKR ddPTM_A549_PD325901_60min_R1 6 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 PCSEETPAIS(1)PSKR;PCSEET(0.001)PAIS(0.988)PS(0.01)KR;PCSEETPAIS(0.999)PS(0.001)KR;PCSEETPAIS(0.996)PS(0.004)KR;PCSEET(0.001)PAIS(0.947)PS(0.052)KR;PCSEET(0.004)PAIS(0.993)PS(0.003)KR 186.39 3.0398e-26 4435271700.0 35185.2 32825.100000000006 41367.0 38230.9 45451.8 41466.700000000004 41388.1 42213.899999999994 45787.1 41291.899999999994 42759.899999999994 True False 38757.17560202478 35591.386376698494 44174.41337997896 40592.335864326444 42259.422368197644 41129.00894344058 42963.146793937354 41371.91064833607 43862.8274159293 38684.72238708025 37500.70337733914 1.0335052975418295 0.9490858349661142 1.1779622620804655 1.082441986644323 1.126896792920799 1.0967530003262271 1.1456624256253032 1.10323025763128 1.1696534588851113 1.0315732480489042 1.0 15.194630035144165 -5.747970858967517 24.996269612636787 1.0967931182755293 0.9912955587973667 0.3832048136535581 0.0544599808068153 234.92940160804756 435998.61120024556 0.009181069215717937 0.03516282896948002 1.7866074516666683e-06 5.747970858967517 -0.10549755947816253 PDERPS(ph)SPIPLLPPPK ddPTM_A549_PD325901_60min_R1 1 PDERPSSPIPLLPPPK 16 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PDERPS(0.5)S(0.5)PIPLLPPPK 81.157 7.1536e-05 3371400.0 2022.0 2545.8 2002.1 2247.3 2420.5 1961.4 2250.5 2851.1 2142.5 2803.9 2732.8 True False 2227.271951482274 2760.3435004858766 2137.9745456053333 2386.1106170113917 2250.492430271682 1945.4270087000968 2336.1440090208525 2794.232573855319 2052.458175744446 2626.861275483434 2396.682924646514 0.9293143989043829 1.1517349550495917 0.8920556505907691 0.9955887749996459 0.9390029891432579 0.811716472251759 0.9747405403513731 1.16587494537578 0.8563745143914532 1.0960403850129106 1.0 11.226823341209403 -5.786295397125566 24.999883350993947 0.9439767211645089 1.0405249556394274 0.01447886322929326 0.10943406603533884 312.2755432283064 314083.07544682914 0.013827132084323492 0.04301499447435011 1.6357035749907115e-06 5.786295397125566 0.09654823447491845 PDS(ph)NFAER ddPTM_A549_PD325901_60min_R1 1 PDSNFAER 8 0 Q7Z773;F8WCH9;C9JJM7;C9J306;B3KPX4;Q9UJ83-3;Q9UJ83-4;Q9UJ83-2;Q9UJ83 Q7Z773 HACL1 2-hydroxyacyl-CoA lyase 1 1 PDS(1)NFAER 49.18899999999999 0.033902 2509500.0 717.24 1001.6 1017.7 972.6 1206.8 973.03 1074.1 771.85 959.13 1052.4 1146.9 True False 790.0536767958191 1086.008347115506 1086.7672419272506 1032.675293065135 1122.0385312339863 965.1059662870687 1114.9754632700722 756.4548462453889 918.8211015644205 985.9512843962922 1005.8385707981146 0.7854676682053721 1.0797044164390894 1.080458906109477 1.0266809436883357 1.1155254568769113 0.9595038352141086 1.1085033877606816 0.7520638681067437 0.9134876393091117 0.9802281529271221 1.0 9.974183067144718 PEES(ph)SPR ddPTM_A549_MK2206_60min_R1 1 PEESSPR 7 0 C9JAM4;A0A3B3ITT3;Q99685 C9JAM4 MGLL Monoglyceride lipase 1 PEES(0.5)S(0.5)PR 54.157 0.043148 4736200.0 668.15 334.01 331.61 181.19 116.03 0.0 114.12 92.21700000000001 165.41 584.71 481.36 True False 780.9173853008591 351.0096823279418 378.6372843821997 225.5815581339282 98.9621407040116 0.0 134.85412680679335 105.2890421527182 127.94489910549225 452.62360490126866 361.8250271398465 2.1582735486095386 0.9701089090011329 1.0464651585194389 0.6234548226724522 0.27350827964081775 0.0 0.37270535947385364 0.29099435985677036 0.3536098652900568 1.2509460953521279 1.0 8.499148391215874 -4.67718092714498 1.0208388096633132 0.5605031031783734 5.520281735084082 0.6402316368690602 0.35011858812536556 2.614393236656242 0.9198472668008312 0.05461354292988324 18.908013728002615 2.102902187895322e-05 4.67718092714498 4.959778631905709 PEFLEDPSVLTK ddPTM_A549_PD325901_60min_R1 2 PEFLEDPSVLTK 12 0 P42166;P42167;G5E972;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 0 ; 85.37700000000001 0.0011115 1624730.0 2345.8 2521.6 2240.6 2323.8999999999996 2895.3 2490.4 2774.7 2871.7 3054.8 2565.5 3350.5 False True 2583.9438891133127 2734.1040815559695 2392.6605898223415 2467.4420250401677 2691.9441162427584 2470.119008089488 2880.292726874099 2814.421690694931 2926.417379353155 2403.513892169032 2938.409740569431 0.879368133530817 0.9304706705151783 0.8142705752665625 0.839720203405671 0.916122785422393 0.8406312346387765 0.9802216100454154 0.9578043701112723 0.995918758010259 0.8179641725878766 1.0 11.520819868259188 -7.8229198870101735 6.286061997756801 0.9936010838803361 0.8711077470234712 0.16149742819242674 0.06256502662088097 0.07218683518130503 5.51923334489685 0.005147832269222235 0.007170095955789801 1.5034192717192798e-08 7.8229198870101735 -0.12249333685686492 PEIEDVGS(ph)DEEEEKKDGDK ddPTM_A549_MK2206_60min_R1 3 PEIEDVGSDEEEEKKDGDK 19 2 P07900;P07900-2;Q14568 P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 1 PEIEDVGS(1)DEEEEKKDGDK;PEIEDVGS(1)DEEEEKKDGDK;PEIEDVGS(1)DEEEEKKDGDK 84.762 1.7800000000000002e-05 21304000.0 5225.0 4023.6 3788.6499999999996 3705.49 5479.299999999999 4376.6 4463.83 4158.04 6479.6 5316.599999999999 7106.5 True False 6106.852261014722 4228.384053814873 4325.937539503093 4613.335216345765 4673.302228384821 4839.728907048046 5274.850130248585 4747.454903463444 5011.980945794979 4115.576367460937 5341.75992057778 1.1432285149112782 0.7915713391622287 0.8098337633704787 0.863635821328109 0.8748618990498068 0.9060176756361163 0.9874742048830308 0.8887435927577115 0.9382639842138149 0.7704532642147992 1.0 12.383099421777912 -9.402653985176231 0.45660303008306113 1.0003573954830423 0.8897840131503987 0.0 0.11239334645042322 1.2854832375834353 0.6271726799631391 0.05544677224439699 0.030274603251939605 3.956817454700393e-10 9.402653985176231 -0.11057338233264358 PEIEDVGS(ph)DEEEEKKDGDK ddPTM_A549_PD325901_60min_R1 2 PEIEDVGSDEEEEKKDGDK 19 2 P07900;P07900-2;Q14568 P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 1 PEIEDVGS(1)DEEEEKKDGDK;PEIEDVGS(1)DEEEEKKDGDK 210.36 8.400799999999999e-67 49145000.0 7715.0 8008.7 8435.4 8113.5 9476.7 6728.6 8320.0 6359.2 5354.5 7026.2 8687.8 True False 8498.221120517184 8683.621255535092 9007.876970180921 8614.652467904563 8811.089284840178 6673.804512460219 8636.622152878692 6232.360767304107 5129.4689857753265 6582.564532901208 7619.255676501751 1.1153610643000493 1.1396941675439387 1.1822515679532535 1.1306422613527298 1.1564238895426642 0.8759129232324673 1.1335257037658628 0.8179750138225559 0.6732244202796503 0.8639380029209728 1.0 12.895434352686559 -7.686252583031449 1.1863373061253735 0.8448547547496751 1.1462591673850395 0.5724203455057022 0.10771879011066186 0.2952646286384372 0.839985725926461 0.024218794861678883 0.04129142145909787 2.059431811872993e-08 7.686252583031449 0.30140441263536444 PEPAKS(ph)APAPK ddPTM_A549_MK2206_60min_R1 2 PEPAKSAPAPK 11 1 P62807;O60814;P57053;Q16778;P06899 P62807;Q16778 HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BJ Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J 1 PEPAKS(1)APAPK;PEPAKS(1)APAPK 57.803999999999995 0.0035038000000000005 11566800.0 3219.1 3606.6000000000004 3634.9 3234.3 4830.9 3332.1 3694.8 2821.1 5245.3 5534.4 5307.5 True False 3762.405380561246 3790.160534965882 4150.3834775816695 4026.7036451932445 4120.281009454535 3684.700610331029 4366.097333734141 3220.999564256408 4057.2479250229067 4284.175196192267 3989.501270451919 0.9430766217390004 0.9500336703832015 1.040326395763129 1.0093250690297715 1.0327809743967826 0.9235993074176003 1.0943967773795351 0.8073689782010127 1.0169812339885065 1.073862346635365 1.0 11.961992690353485 -8.456800212452046 0.003352139458329401 1.984266963874907 1.2805543866991744e-05 0.035289432599742154 0.07553572257792063 38511.99428803391 101.65441484352476 30047.873669921817 30120.998098282624 3.4930096668935155e-09 8.456800212452046 -1.98425415833104 PEPAKS(ph)APAPK ddPTM_A549_PD325901_60min_R1 2 PEPAKSAPAPK 11 1 P62807;O60814;P57053;Q16778;P06899 P62807;Q16778 HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BJ Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J 1 PEPAKS(1)APAPK;PEPAKS(1)APAPK 85.45700000000001 0.00011928 23679400.0 7936.700000000001 7165.5 7297.5 6774.2 10293.7 7748.2 8006.0 8366.3 7972.8 8336.4 8865.0 True False 8742.427941310263 7769.361832324437 7792.752233432357 7192.626948675547 9570.706023337165 7685.101228107523 8310.672711051304 8199.427583264616 7637.730942158842 7810.038281301079 7774.661199865099 1.1244770307755605 0.9993183796175256 1.0023269224345843 0.9251370270385993 1.2310126161514574 0.988480530603812 1.0689433915391073 1.0546347130093447 0.9823876238222917 1.004550305219293 1.0 12.924564092262326 -8.76063725559483 24.993727794801686 0.9916830428249238 1.0466070260019635 0.08888959440801536 0.07584928547179913 36.45323338029532 1135841.8144259832 0.012201181972645048 0.013437656334691387 1.735252762256324e-09 8.76063725559483 0.054923983177039726 PFGSVSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 PFGSVSSPK 9 0 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 PFGSVS(0.049)S(0.951)PK 138.98 4.2426000000000003e-05 15220000.0 5228.8 4219.4 4942.4 4164.4 6015.3 4371.1 4746.4 5760.8 5434.2 5604.5 5622.0 True False 5759.623926760887 4574.983645985589 5277.820985065581 4421.62552996139 5592.806079658438 4335.503210833588 4927.026849329736 5645.896324739823 5205.819471939546 5250.6309135300435 4930.529640794311 1.1681552178708754 0.9278888840121762 1.0704369245441392 0.8967851026343419 1.1343215611938668 0.8793179489202171 0.9992895709548945 1.145089216790565 1.055833724001482 1.0649222895015726 1.0 12.267526914856617 PFNT(ph)YPR ddPTM_A549_MK2206_60min_R1 2 PFNTYPR 7 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 PFNT(1)YPR;PFNT(1)YPR 72.928 0.020552 16125000.0 3128.6 3155.3999999999996 2831.3 2167.1 3966.5 3323.0 2781.4 2929.3 3959.7999999999997 3987.5 3797.4 True False 3656.6311930738125 3315.9963821969 3232.82091393903 2698.039597284816 3383.0331043907763 3674.637654371123 3286.744376975244 3344.53724560501 3062.9116225012276 3086.7209805609773 2854.400777091686 1.28105037751549 1.161713662920008 1.1325742831505643 0.945221014140073 1.1851990552769214 1.2873586932368923 1.1514656257640412 1.1717125613358044 1.0730489029721995 1.0813901836538875 1.0 11.478972197797155 -9.108940099536662 1.3642377781969361 1.021878838980675 1.1610410495965253 0.23500820434808567 0.08759759657263201 0.3337791182982572 1.2768702464934085 0.01957497407403615 0.01816616673155175 7.78143869843041e-10 9.108940099536662 0.13916221061585032 PFNT(ph)YPR ddPTM_A549_PD325901_60min_R1 1 PFNTYPR 7 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 PFNT(0.999)Y(0.001)PR 57.59 0.036884 7750400.0 1152.0 1287.5 1173.0 1336.8 1275.6 1099.9 1269.1 1313.0 1251.4 1464.9 1553.5 True False 1268.9501919424226 1396.0021434816435 1252.6068338220157 1419.371099906923 1186.0062565811015 1090.9427790706832 1317.3962949781676 1286.8111849714257 1198.8080098607238 1372.4059639986012 1362.4293484478767 0.9313878869301013 1.0246418612987265 0.9193921396724356 1.0417942783777494 0.8705084472323192 0.8007334694555136 0.9669465036693373 0.9444975524326472 0.8799047166933422 1.0073226663548391 1.0 10.411965702598115 -6.765122583102911 24.998021434733907 0.9288177032079378 0.9782630296852324 0.13861429151822158 0.06535074722453577 175.63297413409498 1192038.7869583296 0.009963625307613579 0.019370837334004673 1.7174235621544778e-07 6.765122583102911 0.049445326477294604 PFRGS(ph)VGR ddPTM_A549_PD325901_60min_R1 2 PFRGSVGR 8 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 PFRGS(1)VGR;PFRGS(1)VGR 56.916000000000004 0.0049588 11210800.0 1831.75 1639.65 2000.5100000000002 1790.38 2065.81 1769.99 1807.93 1825.21 1885.22 2154.01 1748.25 True False 2017.7079115369218 1777.8290598521755 2136.276638643887 1900.9677063520026 1920.7146322576086 1755.5757882783148 1876.731765487258 1788.8047547004544 1805.990759429147 2018.005440994355 1533.2263330698433 1.315988297368363 1.159534650238224 1.3933211245900072 1.2398480676664763 1.2527273963602827 1.1450206342094849 1.2240409162094446 1.1666932116401165 1.1779022577920193 1.316182351860525 1.0 10.582354966326298 -14.999999988504088 0.1140467982334741 0.20016863533208093 1.3627299062547285 0.0 0.11215515751203778 31.60989337856431 0.2536253194666796 5.806445321146257 0.24802259774001667 1.0000000264703155e-15 14.999999988504088 1.1625612709226476 PFSAPKPQT(ph)SPSPKR ddPTM_A549_PD325901_60min_R1 1 PFSAPKPQTSPSPKR 15 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PFS(0.004)APKPQT(0.497)S(0.497)PS(0.003)PKR 47.568000000000005 0.0098953 10075000.0 2150.4 2355.8 3002.1 2608.6 3782.5 3408.1 2823.8 3309.9 3163.8 3066.1 3030.3 True False 2368.7070249591893 2554.331533680819 3205.8405590938387 2769.727297439557 3516.830248916602 3380.3455635519554 2931.261254242649 3243.8814479336825 3030.8364884108673 2872.5059227361 2657.592310654394 0.8912981180232001 0.9611449895608147 1.2062950913281527 1.0421942019984063 1.323314428182791 1.2719579109256203 1.1029762700964723 1.220609133661635 1.1404444828727576 1.0808677881931357 1.0 11.37590408885887 -5.605968837182569 5.683266628675755 1.116306139299943 0.9076145744175605 0.4078119600106964 0.09889338231442715 0.16970997046957373 8.652767681984118 0.015767353746424292 0.06414322400731201 2.477599831527342e-06 5.605968837182569 -0.20869156488238239 PFSAPKPQTS(ph)PSPK ddPTM_A549_MK2206_60min_R1 1 PFSAPKPQTSPSPK 14 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PFS(0.001)APKPQT(0.108)S(0.705)PS(0.186)PK 72.583 0.00037727 38648000.0 4476.3 4255.9 5388.7 4648.5 6496.7 5221.3 4946.9 5020.9 7239.5 5772.4 6198.2 True False 5231.79000497229 4472.50713158135 6152.898689274626 5787.382708679095 5541.044036126453 5773.814500381566 5845.687696289222 5732.627950861369 5599.764809105929 4468.410830894091 4659.0158783824945 1.1229388655332615 0.9599682096670819 1.3206434255404973 1.24218995164454 1.1893164094667517 1.239277703939937 1.2547043944221785 1.2304375216792798 1.2019200954193874 0.959088989506819 1.0 12.185809531962857 -10.556385821883074 0.8419099021473365 0.9991723847447429 1.1972453842447808 0.4543060529944234 0.08981370994781653 0.5127371023826441 0.6470781733828782 0.06245362339773325 0.017184055668177715 2.777244901232365e-11 10.556385821883074 0.19807299950003787 PFSAPKPQTS(ph)PSPK ddPTM_A549_PD325901_60min_R1 2 PFSAPKPQTSPSPK 14 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PFSAPKPQT(0.02)S(0.49)PS(0.49)PK;PFS(0.001)APKPQT(0.086)S(0.542)PS(0.371)PK 110.04 3.3346e-06 139000000.0 9484.900000000001 8773.6 10400.7 9526.5 12239.5 10425.1 10339.6 11093.8 10839.5 10697.7 10083.1 True False 10447.800065585665 9512.982062951876 11106.554046489879 10114.930268748732 11379.839743982744 10340.201442030891 10733.079136046214 10872.525456082263 10383.953510376636 10022.245396319096 8842.942622037204 1.181484547864084 1.0757710944821568 1.25597943141818 1.143842123722668 1.2868838157587297 1.169316808215222 1.2137451971359243 1.2295144185361107 1.1742644902500134 1.1333608985930759 1.0 13.110310812626894 -10.36949095512146 0.7230566540620198 0.9978919723944888 1.1940903884929113 0.28453065473667116 0.06574904422849072 0.33631547443933657 0.3178325190658081 0.03621723951294459 0.010655699715968471 4.2707981396964265e-11 10.36949095512146 0.19619841609842248 PFSAPKPQTSPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 PFSAPKPQTSPSPK 14 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PFS(0.001)APKPQT(0.07)S(0.38)PS(0.549)PK 70.783 0.00061111 37060000.0 3075.6 3726.3 4407.3 3995.2 5548.0 4847.5 4227.8 4249.8 5279.9 5791.1 5343.3 True False 3594.6860887994026 3915.952753685846 5032.321412073426 4974.024179351346 4731.896549391159 5360.459232489921 4995.93653447039 4852.222164466659 4084.0110802677495 4482.886487906376 4016.4111424221833 0.8949995310070646 0.9749880216008578 1.2529398096029023 1.2384250523594686 1.1781404795469936 1.3346390701568418 1.243880757550504 1.2080989700522595 1.0168309307609376 1.1161423292942252 1.0 11.971691243884363 -8.77242515345635 21.341368461342533 1.0079477865178987 1.173378263254558 0.13926493216604985 0.12485137956150562 36.24671013570589 70413.45759056785 0.022078612193852504 0.023657511474389662 1.6887868808443228e-09 8.77242515345635 0.16543047673665923 PGAGQPGEFHT(ph)TPPGTPR ddPTM_A549_MK2206_60min_R1 2 PGAGQPGEFHTTPPGTPR 18 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 PGAGQPGEFHT(0.641)T(0.359)PPGTPR;PGAGQPGEFHT(0.819)T(0.181)PPGTPR 110.75 2.0255999999999997e-09 21939100.0 6794.23 8577.6 10549.5 6273.83 10760.8 6340.96 7012.68 6787.91 9975.6 9483.9 9501.7 True False 7940.929921024697 9014.163202108182 12045.577731642628 7810.918631642935 9177.900574745565 7011.9561784114085 8286.793182399782 7750.117029602539 7716.1425277598 7341.480403145387 7142.165656420726 1.111837823851914 1.2621050302865142 1.6865441535668932 1.0936344811074226 1.285030481825178 0.9817689081613137 1.1602633684294412 1.0851214326897154 1.0803645419261698 1.0279067661424905 1.0 12.802145881051068 -6.973084093317942 1.6155705286499207 1.048819100456824 1.3290884153863431 0.3505224975694552 0.15305866099589974 0.27949626104868774 1.454740374479097 0.022422174746976612 0.04950546446116951 1.0639369860096556e-07 6.973084093317942 0.28026931492951923 PGAGQPGEFHT(ph)TPPGTPR ddPTM_A549_PD325901_60min_R1 1 PGAGQPGEFHTTPPGTPR 18 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 PGAGQPGEFHT(0.5)T(0.5)PPGT(0.001)PR 111.38 1.7092000000000003e-09 23114000.0 4789.8 5651.3 3942.7 3752.1 5150.5 4820.3 4272.9 4816.9 4887.2 5568.5 5498.0 True False 5276.056969935605 6127.554884239075 4210.275331381122 3983.858695362631 4788.746648260401 4781.04507496537 4435.507547720596 4720.823150715052 4681.807979695803 5216.903959673848 4821.780854693551 1.0942133475020663 1.270807419270097 0.8731784911549462 0.8262214346561848 0.9931489614670077 0.991551714821604 0.9198899081867328 0.9790621542079777 0.9709707099480687 1.0819454713699153 1.0 12.235350367989229 -5.7607772836636855 24.99997676832683 0.9656084145697374 1.182510397786939 0.5664231906491175 0.07508383605116611 8.012395761255155 302468.20072724955 0.009168331962349332 0.03175954839601656 1.7346933608930842e-06 5.7607772836636855 0.21690198321720144 PGAGQPGEFHTT(ph)PPGTPR ddPTM_A549_MK2206_60min_R1 2 PGAGQPGEFHTTPPGTPR 18 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 PGAGQPGEFHT(0.172)T(0.827)PPGT(0.001)PR;PGAGQPGEFHT(0.141)T(0.859)PPGTPR 104.38 5.221600000000001e-09 17099700.0 5803.200000000001 7338.8 8041.299999999999 5639.88 8712.9 6197.3 6492.9 5667.98 9316.9 8267.300000000001 8434.800000000001 True False 6782.638285381945 7712.313573450789 9181.677256121893 7021.650853183834 7431.24395190884 6853.094172565196 7672.575884541078 6471.433522460758 7206.637026032049 6399.7111881107885 6340.206371362763 1.069781942117459 1.2164136499224243 1.448166939422255 1.107479858210767 1.1720823450596245 1.080894496355675 1.2101460796601697 1.0206976150951044 1.1366565382765381 1.009385312285227 1.0 12.630314084978831 -9.978724946313262 0.1599321083298886 0.8833565222828235 1.273617088690718 0.31949432553432344 0.10155711247385743 7.187170289666327 0.46110995604810245 0.7542931741288902 0.31719527289368316 1.0502073506381887e-10 9.978724946313262 0.39026056640789464 PGAGQPGEFHTT(ph)PPGTPR ddPTM_A549_PD325901_60min_R1 1 PGAGQPGEFHTTPPGTPR 18 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 PGAGQPGEFHT(0.35)T(0.65)PPGTPR 130.05 1.5163e-12 24179000.0 3927.6 4561.5 4408.6 3997.2 4976.1 4512.7 3981.3 4631.2 4126.8 5171.5 4832.3 True False 4326.327060653697 4945.913613585643 4707.794107065419 4244.097965700143 4626.595902613065 4475.950067380915 4132.810550150953 4538.827082893881 3953.364947333576 4844.970607426288 4237.95773447356 1.0208518658554093 1.1670511891501971 1.1108638646322466 1.0014488656119986 1.0917041161071848 1.056157316287374 0.9751891852371981 1.0709939473848233 0.9328467141555068 1.1432324036681623 1.0 12.049153484318971 -7.694728473673339 0.8241830387516436 0.9710591849967618 1.0911875401705116 0.0 0.07324246197598933 0.38182238269411234 0.5223876747314183 0.010241545116561442 0.019289359704432223 2.0196286660679306e-08 7.694728473673339 0.12012835517374976 PGHVS(ph)PLQLTNIQVPQQALPTQR ddPTM_A549_MK2206_60min_R1 2 PGHVSPLQLTNIQVPQQALPTQR 23 0 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 1 PGHVS(1)PLQLTNIQVPQQALPTQR;PGHVS(0.999)PLQLT(0.001)NIQVPQQALPTQR 105.17 1.0033e-10 7040200.0 1690.4299999999998 1626.65 1643.17 1297.82 2420.3 1721.9899999999998 1630.3899999999999 1842.81 2114.8 2337.24 2577.8 True False 1975.7332569544735 1709.439537016096 1876.196214162116 1615.7859582613537 2064.2770761520233 1904.2098388355487 1926.610758890008 2104.033960868936 1635.8011766416496 1809.2558607163214 1937.6611163393234 1.019648503184642 0.8822180114991474 0.9682788173541261 0.8338846997734753 1.065344738945841 0.9827362601118963 0.9942970639416081 1.0858627151707148 0.8442142760918097 0.9337318303287273 1.0 10.920100559993337 -5.206144922964054 21.172665725281735 0.9463145133652201 1.0196511578076777 0.0245967043742239 0.07860542133690059 19680.464291965072 7534176.958363585 0.011616205180031362 14.365503798503756 6.220926597906751e-06 5.206144922964054 0.07333664444245758 PGHVS(ph)PLQLTNIQVPQQALPTQR ddPTM_A549_PD325901_60min_R1 2 PGHVSPLQLTNIQVPQQALPTQR 23 0 P22670 P22670 RFX1 MHC class II regulatory factor RFX1 1 PGHVS(1)PLQLTNIQVPQQALPTQR;PGHVS(1)PLQLTNIQVPQQALPTQR 176.09 3.3521999999999996e-41 14421800.0 2338.87 2398.1 2606.0 3110.7 3342.0 2625.1 3142.0 2994.1 2735.5 2786.1 3464.7 True False 2576.3103606149075 2600.1963031326823 2782.8588311510407 3302.8408740877207 3107.2694492740998 2603.7220559491298 3261.5705293683704 2934.38032667399 2620.536447957496 2610.1851705211993 3038.5638645428785 0.8478710586530613 0.8557319901926287 0.9158467470848087 1.0869743146190545 1.0226112031189962 0.8568923254607431 1.0733921269280418 0.9657129017149811 0.8624259896382759 0.8590193548273094 1.0 11.56917389943169 -5.878239476158697 4.315151313767187 0.9559214018438364 0.8521633256324896 0.23690629919066541 0.07729897481040551 0.255388731294234 8.278665779356292 0.01114517821433855 0.0378584828740903 1.3236114757237053e-06 5.878239476158697 -0.1037580762113468 PGLVTVTSSQS(ph)TPAK ddPTM_A549_PD325901_60min_R1 1 PGLVTVTSSQSTPAK 15 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 PGLVTVTSS(0.001)QS(0.674)T(0.325)PAK 154.72 2.1302999999999998e-19 4239700.0 2834.7 2286.8 2759.7 2648.0 3372.3 2892.7 3778.9 3378.9 2789.7 3519.8 3248.3 True False 3122.4766572041563 2479.516661525297 2946.9898374242234 2811.560945955663 3135.4412818034266 2869.142810271627 3922.7081073934223 3311.505188804228 2672.4586104430714 3297.559227307172 2848.779692670254 1.096075159914299 0.8703785230935724 1.0344744611198466 0.9869351965649178 1.1006260996140687 1.0071480141668259 1.3769784014840896 1.1624293718901957 0.9381064521483193 1.1575339559572129 1.0 11.476128341360164 -8.7810038220683 24.9896841163873 0.9707724859119528 1.07605589459131 0.0 0.1323024715972539 370.9629536249659 473829.2268065799 0.021840311793051622 0.023266634252734435 1.655755391702431e-09 8.7810038220683 0.10528340867935715 PGLVTVTSSQST(ph)PAK ddPTM_A549_MK2206_60min_R1 2 PGLVTVTSSQSTPAK 15 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 PGLVTVTSSQS(0.207)T(0.793)PAK;PGLVTVTSS(0.001)QS(0.01)T(0.989)PAK 138.42 1.3060999999999999e-29 1865800.0 1186.0 1248.8 1252.8 1264.8 2254.6 1341.0 1936.4 1827.8 2323.6 2430.0 1745.0 True False 1386.1678050839164 1312.3585859439347 1430.4658782124163 1574.6760567790295 1922.9513266505605 1482.903729916243 2288.218814832408 2086.896247402738 1797.3083100267318 1881.0613122917055 1311.6683404500425 1.0567974863282228 1.000526234774909 1.0905697988575478 1.2005138861846336 1.4660347188000151 1.1305477796372279 1.744510212122147 1.5910243337021532 1.370246010062317 1.4340982810077587 1.0 10.35718726065776 -6.263414694583488 3.0739732196301395 1.2692812859990394 1.034938884138419 0.22852985437285755 0.21348881787037233 0.4175672140056444 8.026441038014275 0.036283855864203025 0.1007903280726662 5.4523698224452e-07 6.263414694583488 -0.2343424018606204 PGLVTVTSSQST(ph)PAK ddPTM_A549_PD325901_60min_R1 1 PGLVTVTSSQSTPAK 15 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 PGLVTVTSSQS(0.019)T(0.98)PAK 139.48 3.0386e-10 4566500.0 5822.4 5123.4 6814.3 5638.4 7765.4 6765.2 6077.8 6506.8 6432.4 6815.3 6721.4 True False 6413.485761775661 5555.166898573864 7276.7593757147115 5986.671162264505 7219.9850931756755 6710.106454194911 6309.094004899772 6377.016769514148 6162.068597273549 6384.980794893628 5894.710410465118 1.0880069274293 0.9423986102373327 1.234455786461704 1.0156005546321878 1.2248243917729604 1.1383267348099386 1.0702975321228643 1.0818201956440086 1.0453556100625028 1.0831712417217498 1.0 12.525205224305111 -8.969852298833935 0.9917738909180229 1.0123112069777542 1.1041497197813497 0.07085104744364923 0.08164068193496557 0.542509289790539 1.0950456208894281 0.017844259509383054 0.01692596365623653 1.0718837850386651e-09 8.969852298833935 0.09183851280359545 PGPQALPKPAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 PGPQALPKPASPK 13 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PGPQALPKPAS(1)PK;PGPQALPKPAS(1)PK 91.65700000000001 5.0501e-05 22533000.0 11764.599999999999 11016.3 14238.8 13323.8 17031.3 13868.0 14338.5 14932.099999999999 16580.0 15659.1 16995.800000000003 True False 12958.933531359226 11944.682262708217 15205.130592860109 14146.7808654547 15835.080242795324 13755.063605920745 14884.159463828255 14634.267551494164 15883.200258503111 14670.381753601281 14905.424345252937 0.8694105737074418 0.8013647908328316 1.0201071932381867 0.9491028593198121 1.0623703073464301 0.9228226776583816 0.9985733461233893 0.9818081801981619 1.0655986633189396 0.9842310700985503 1.0 13.86354982781228 -5.767085441092524 24.981580229704093 1.0149967923988261 0.835387662378184 0.6449097410053319 0.04525359562130996 49.095944333586594 217234.5935193534 0.006452711052614477 0.020894779604825726 1.7096789276579907e-06 5.767085441092524 -0.17960913002064216 PGPS(ph)PLPHR ddPTM_A549_MK2206_60min_R1 2 PGPSPLPHR 9 0 P08621-4;P08621 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 PGPS(1)PLPHR;PGPS(1)PLPHR 73.885 0.00067531 11640200.0 498.67 748.95 496.56999999999994 451.94000000000005 665.65 426.53 367.02 536.0 711.61 600.29 770.86 True False 582.8333046890361 787.0683559759052 566.9910928671295 562.6653202883577 567.7337667812228 471.6651214923007 433.70278321616985 611.9796414311561 550.4314712076618 464.6840720804889 579.4341873463151 1.0058662699180527 1.3583395201110076 0.9785254395565227 0.9710599280743941 0.979807162192694 0.8140098250888963 0.7484936040837287 1.056167645602501 0.949946487846222 0.8019617796606768 1.0 9.17850099771741 -5.9001527988565625 9.340505531993816 0.9544149912179647 1.1814609810185424 0.3874244667833683 0.12093434293946011 0.20051038792177836 17.10122546597758 0.014705220381681157 0.04589738458862716 1.2584825589932473e-06 5.9001527988565625 0.22704598980057766 PGPS(ph)PLPHR ddPTM_A549_PD325901_60min_R1 2 PGPSPLPHR 9 0 P08621-4;P08621 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 PGPS(1)PLPHR;PGPS(1)PLPHR 82.26100000000001 0.00046950000000000003 15760000.0 1187.77 1111.04 943.1500000000001 1330.96 1553.54 896.19 761.6700000000001 832.1600000000001 1303.25 1063.12 1601.33 True False 1308.3515360099402 1204.6712399952196 1007.157830621683 1413.1703763705257 1444.424709822048 888.8917257708479 790.655768651817 815.561915983109 1248.4789346739558 995.9944217668052 1404.3765616672276 0.9316244458371693 0.8577978819050321 0.7171565362968033 1.006261721352611 1.0285166736956053 0.6329440052143751 0.5629941357844777 0.580728800411552 0.8889915772959102 0.7092075223645109 1.0 10.455714108345552 -9.168158051140225 2.883378760238341 0.9590372953147052 0.7906907456654254 0.0 0.17107553001004402 0.3176696280085081 5.482309803520441 0.03240208257934664 0.03091256918290406 6.789564975927223e-10 9.168158051140225 -0.16834654964927975 PGPTPSGTNVGS(ph)SGRSPSKAVAAR ddPTM_A549_MK2206_60min_R1 2 PGPTPSGTNVGSSGRSPSKAVAAR 24 2 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 PGPTPS(0.002)GT(0.011)NVGS(0.323)S(0.323)GRS(0.323)PS(0.019)KAVAAR;PGPTPSGTNVGS(0.347)S(0.347)GRS(0.288)PS(0.018)KAVAAR 63.901 7.0078e-05 28789000.0 1989.1100000000001 2339.8 2675.5 2188.2 3113.8999999999996 1831.77 1829.32 1759.6 3479.3999999999996 4197.6 4021.3 True False 2324.823138929568 2458.885825906166 3054.926131191989 2724.3090982320296 2655.849434958386 2025.606685569482 2161.6837648983806 2009.0286885489961 2691.3214554600677 3249.3592446401913 3022.7002277660495 0.7691213033876492 0.813473265830077 1.0106612965222015 0.9012832543587863 0.8786347420634605 0.6701315158422185 0.7151498997623029 0.6646470166291629 0.8903699515876604 1.0749856088248804 1.0 11.561622193379637 -9.387295635856079 1.6716382921796333 0.9682784715647184 0.8100870199707669 0.382109789474272 0.10509933911006117 0.3116590310571519 1.7853908018963736 0.024695728346261187 0.020973852035293023 4.099249611154787e-10 9.387295635856079 -0.15819145159395143 PGPTPSGTNVGSS(ph)GRSPSK ddPTM_A549_PD325901_60min_R1 1 PGPTPSGTNVGSSGRSPSK 19 1 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 PGPTPSGT(0.003)NVGS(0.082)S(0.589)GRS(0.316)PS(0.009)K 82.007 0.00016193 75328000.0 1566.4 1225.4 1612.4 1103.5 1787.3 1560.3 1685.4 1383.3 1730.5 1937.3 1840.9 True False 1725.4197748772672 1328.6687585416737 1721.8271601488643 1171.6606887696657 1661.766213850269 1547.5934341158154 1749.5388192862677 1355.7089963221438 1657.7731029758531 1814.9785473783145 1614.4809704265829 1.0687148417868138 0.8229696000632383 1.066489597392974 0.7257197267924974 1.0292882011555653 0.9585702541336897 1.0836540357759679 0.8397181640139953 1.0268148918087474 1.1241870177625912 1.0 10.656854720948143 PGPTPSGTNVGSSGRS(ph)PSK ddPTM_A549_MK2206_60min_R1 6 PGPTPSGTNVGSSGRSPSK 19 1 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 PGPTPSGTNVGSS(0.008)GRS(0.99)PS(0.002)K;PGPTPSGTNVGSSGRS(0.995)PS(0.005)K;PGPTPSGTNVGS(0.006)S(0.187)GRS(0.806)PS(0.001)K;PGPTPSGTNVGS(0.001)S(0.007)GRS(0.941)PS(0.051)K;PGPTPS(0.001)GT(0.001)NVGS(0.018)S(0.058)GRS(0.921)PS(0.001)K;PGPTPSGTNVGS(0.025)S(0.149)GRS(0.709)PS(0.117)K 194.77 1.8558e-54 4778567000.0 30343.7 28279.899999999998 36515.2 26598.600000000002 44042.49999999999 31101.0 30387.1 28076.699999999997 47380.6 49782.0 45481.8 True False 35464.974727761255 29719.22611678079 41693.60443494736 33115.258194056536 37563.90659274697 34392.08717682706 35908.04273300654 32056.65820628759 36648.969751270706 38536.211624899435 34187.41382617806 1.0373693344597168 0.8693031379292024 1.2195600593520661 0.9686388786945753 1.0987642055563576 1.0059868041405424 1.0503293087794479 0.9376742671813653 1.0720018173240053 1.1272046438151868 1.0 15.061177670958783 -11.2808296435147 1.819813290877979 0.9998992362356935 1.0350573660049562 0.0 0.09424846223982404 1.448909071985623 8.656960555670286 0.05922359969267426 0.011797558551277473 5.238058645399243e-12 11.2808296435147 0.03515812976926269 PGPTPSGTNVGSSGRS(ph)PSK ddPTM_A549_PD325901_60min_R1 6 PGPTPSGTNVGSSGRSPSK 19 1 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 PGPTPSGTNVGSSGRS(0.999)PS(0.001)K;PGPTPSGTNVGS(0.002)S(0.015)GRS(0.969)PS(0.014)K;PGPTPSGTNVGSS(0.005)GRS(0.991)PS(0.004)K;PGPT(0.002)PS(0.035)GT(0.035)NVGS(0.135)S(0.135)GRS(0.649)PS(0.009)K;PGPTPSGTNVGS(0.001)S(0.017)GRS(0.974)PS(0.008)K;PGPTPSGTNVGS(0.004)S(0.023)GRS(0.97)PS(0.003)K 253.87 9.650399999999997e-98 7079810000.0 56411.00000000001 48290.5 59313.1 52328.5 75094.8 62111.7 69591.9 66535.8 71529.8 63486.99999999999 64291.600000000006 True False 62137.80319241669 52360.10991052449 63338.44364464501 55560.712598353806 69820.40031099608 61605.882908268504 72240.257836649 65208.69127267466 68523.65125758006 59478.419985240806 56384.14077803124 1.1020439849750665 0.9286318668338275 1.1233379239384162 0.9853961030829743 1.238298559622637 1.0926101215374342 1.2812159029085664 1.1565076699383119 1.2153000881460394 1.054878537909993 1.0 15.783001810997492 -6.735142897477888 24.99981914282901 1.129069882995147 1.0335856808818094 0.24543057612116248 0.09186951895176709 338.31196296454345 321628.2807554827 0.015122570877847446 0.03147282177531496 1.8401664252590182e-07 6.735142897477888 -0.09548420211333775 PGPTPSGTNVGSSGRS(ph)PSKAVAAR ddPTM_A549_PD325901_60min_R1 2 PGPTPSGTNVGSSGRSPSKAVAAR 24 2 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 PGPTPSGTNVGS(0.008)S(0.028)GRS(0.961)PS(0.004)KAVAAR;PGPTPSGTNVGS(0.01)S(0.022)GRS(0.953)PS(0.015)KAVAAR 137.7 8.810499999999999e-24 76765000.0 7096.4 6986.2 8490.3 8797.9 8556.8 19061.5 13195.3 12171.0 11231.3 7797.299999999999 9589.1 True False 7816.821303906431 7574.9515920710355 9066.502814321442 9341.326301519386 7955.799887357454 18906.269463820176 13697.45436224522 11928.239857035214 10759.287518897825 7304.977147304456 8409.70149031319 0.9295004481324725 0.9007396517933877 1.0781004325498114 1.11077977170525 0.9460264310833664 2.2481498880308153 1.6287682003960293 1.418390399561137 1.2793899440177554 0.8686369136548755 1.0 13.03783887633299 PGPTQTLS(ph)PNGENNNDIIQDNNGTIIPFRK ddPTM_A549_PD325901_60min_R1 2 PGPTQTLSPNGENNNDIIQDNNGTIIPFRK 30 1 Q15555-2;Q15555 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 PGPT(0.011)QT(0.053)LS(0.933)PNGENNNDIIQDNNGT(0.003)IIPFRK;PGPT(0.018)QT(0.065)LS(0.916)PNGENNNDIIQDNNGTIIPFRK 73.24 1.0388e-05 10436100.0 1394.3899999999999 1850.43 2043.75 1659.9699999999998 1995.42 1855.0 1730.26 2610.2 2335.2 2129.65 1721.0300000000002 True False 1535.9474463043355 2006.3722301846492 2182.4511650671284 1762.502576834601 1855.2685830252913 1839.8934950232904 1796.1059911346024 2558.137513337712 2237.059664876747 1995.1835355516569 1509.3542205080462 1.0176189428796496 1.3292918275401964 1.445950284839379 1.167719646513027 1.229180372517732 1.2189938385728867 1.189983084640023 1.6948556399680963 1.4821303273155828 1.321878925730291 1.0 10.559715706961569 -10.979658669463639 1.3045253665798582 1.0032825747223495 1.3289087414094192 0.0 0.19736448423544892 0.43861313908714455 1.3492622338757012 0.12299420977817048 0.02954508631883943 1.0479518544829451e-11 10.979658669463639 0.3256261666870697 PGRPLS(ph)PANVPALPGETVTSPVR ddPTM_A549_MK2206_60min_R1 3 PGRPLSPANVPALPGETVTSPVR 23 1 Q8IY33;Q8IY33-3;Q8IY33-5 Q8IY33 MICALL2 MICAL-like protein 2 1 PGRPLS(1)PANVPALPGETVTSPVR;PGRPLS(1)PANVPALPGETVTSPVR;PGRPLS(1)PANVPALPGETVTSPVR 78.836 2.1178000000000003e-05 7372300.0 4607.3 4862.1 4557.9 4724.8 6327.2 4965.1 4884.5 5027.2 7333.6 7250.599999999999 6046.299999999999 True False 5384.899602329791 5109.560122291806 5204.278756628654 5882.376212104329 5396.477261591154 5490.503586433359 5771.950424007904 5739.820995154307 5672.551309352748 5612.684424239605 4544.836840609222 1.1848389262766057 1.1242560077485386 1.1450969394824382 1.294298655464123 1.1873863574974393 1.2080749604417862 1.270001680243859 1.2629322451947254 1.2481309028889933 1.2349583980856924 1.0 12.150012787339087 -10.72674294894871 0.9534102564086088 0.9984455782112579 1.2146154925959136 0.0 0.08444115143284366 0.2620990436471107 0.41862681420608944 0.03887722554362156 0.009771330411909328 1.876104611907455e-11 10.72674294894871 0.21616991438465571 PGRPLS(ph)PANVPALPGETVTSPVR ddPTM_A549_PD325901_60min_R1 2 PGRPLSPANVPALPGETVTSPVR 23 1 Q8IY33;Q8IY33-3;Q8IY33-5 Q8IY33 MICALL2 MICAL-like protein 2 1 PGRPLS(1)PANVPALPGETVTSPVR;PGRPLS(1)PANVPALPGETVTSPVR 114.79 1.0949999999999998e-15 13389600.0 4418.5 4487.5 3953.6000000000004 4018.8999999999996 5279.6 4312.1 3811.2 5011.8 4568.6 5135.4 5064.1 True False 4867.062867272219 4865.677373882621 4221.91507092815 4267.138325415869 4908.779109631219 4276.9836872722 3956.237301568663 4911.83571731896 4376.597629734463 4811.149967587155 4441.247803974825 1.09587734845966 1.09556538807133 0.9506146149173715 0.9607971709204941 1.1052702587858223 0.9630139717591052 0.8907940912524432 1.1059584905221835 0.9854432409327619 1.083287891137548 1.0 12.116749354861891 -5.744756798803656 24.62525656789403 0.9948859705433336 1.0957214872944456 0.20909106498180452 0.06566098177087434 177.8106016581424 262461.9377073423 0.007582268266472186 0.029195533091308994 1.7998785495666575e-06 5.744756798803656 0.10083551675111202 PGS(ph)LPLNAEACWPK ddPTM_A549_PD325901_60min_R1 2 PGSLPLNAEACWPK 14 0 Q01581;D6RIW1 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 PGS(1)LPLNAEACWPK;PGS(1)LPLNAEACWPK 68.03399999999999 0.0034722 3170200.0 3645.2 2979.8 3155.3 2993.0 2901.6000000000004 3806.2 3333.8 3798.7 3115.9 3249.0 3871.6 True False 4015.258020545589 3230.9182036090083 3369.4376323602783 3177.8708124038158 2697.801625976581 3775.203569141589 3460.66958332536 3722.9319484774996 2984.949558834131 3043.8575855221898 3395.4177440944964 1.1825519930586315 0.9515524884171925 0.9923484785401137 0.9359292587579097 0.7945418883048341 1.1118524593056738 1.0192176174328926 1.0964577053744373 0.8791111385412664 0.8964604107451108 1.0 11.729373367308163 -8.781455544855246 24.99892075079157 0.9429136096967462 1.001959965268038 0.11242256726361144 0.10154293233343173 545.747379615787 681600.7580027531 0.018008232577532424 0.01918278360877603 1.654034085935776e-09 8.781455544855246 0.059046355571291786 PGSGPQLGTGRGT(ph)LR ddPTM_A549_PD325901_60min_R1 1 PGSGPQLGTGRGTLR 15 1 K7EM11;K7ESN1;O14908-2;O14908 K7EM11 GIPC1 PDZ domain-containing protein GIPC1 1 PGSGPQLGT(0.15)GRGT(0.85)LR 47.20399999999999 0.011609999999999999 6528600.0 1098.2 1158.8 1323.5 1268.1 1622.4 1397.2 1059.9 1556.0 1697.7 1420.2 1443.3 True False 1209.6884555478894 1256.4561428089544 1413.3206688520356 1346.4276569359427 1508.4482209761518 1385.8216664401834 1100.2350744995347 1524.964359341615 1626.351572910781 1330.5283296271518 1265.7832498325208 0.955683728401325 0.9926313553092123 1.116558201444865 1.0637110714761726 1.1917113148524747 1.094833311013987 0.8692128566601823 1.2047594716894754 1.2848578720930048 1.0511502105934785 1.0 10.30581466639229 -5.694159911505089 2.7111171247441437 1.1203684683076904 0.9567432549524134 0.14061344587810287 0.1069142308668467 0.39179579479683396 5.509951011415237 0.01797741195543198 0.09426718569146755 2.022274420216475e-06 5.694159911505089 -0.16362521335527702 PGSTPSRPSS(ph)AK ddPTM_A549_PD325901_60min_R1 1 PGSTPSRPSSAK 12 1 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 PGSTPS(0.001)RPS(0.278)S(0.72)AK 49.988 0.008373 8067900.0 2008.2 1840.4 1967.6 1840.5 2698.1 2252.8 1731.3 2082.7 1890.6 2061.9 1830.4 True False 2212.070985641296 1995.4969668843619 2101.133168139981 1954.1835049212234 2508.594763939692 2234.453943713459 1797.185568903712 2041.158914653458 1811.1446567386008 1931.7112821139451 1605.272403861599 1.3780034966775725 1.2430893112496355 1.3088950903818897 1.2173532044905857 1.562722163481466 1.3919468984443502 1.1195517748766202 1.2715342952032953 1.128247549999465 1.203354195504186 1.0 10.648602418367302 -8.80691460235948 0.7343500920849988 1.0277094362992558 1.3384132520131233 0.37379970430614284 0.11575736810098003 0.29243522846326453 0.33119245472837006 0.02853568173357342 0.028248014451906434 1.559859196106675e-09 8.80691460235948 0.3107038157138675 PGVGAGHGGDPKLS(ph)PHK ddPTM_A549_MK2206_60min_R1 2 PGVGAGHGGDPKLSPHK 17 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 1 PGVGAGHGGDPKLS(1)PHK;PGVGAGHGGDPKLS(1)PHK 89.846 2.6789e-06 10415000.0 2679.6 2808.8 3396.3 2510.3 4029.4 2782.0 2692.9 3095.3999999999996 4307.9 4351.7 4008.1000000000004 True False 3131.8509700698673 2951.7559226451995 3877.946409780356 3125.3236126916486 3436.680597713905 3076.3893934578578 3182.1650725378004 3534.1824292649294 3332.167528302701 3368.6479476130926 3012.778152067516 1.0395225974141633 0.9797455284318096 1.2871662678246385 1.0373560398222146 1.1407015134371863 1.0211138152826449 1.0562228321902967 1.1730642785097203 1.1060115813758156 1.1181201461187447 1.0 11.556878727692169 -10.674749057478417 0.962369439442678 1.0005025124211393 1.0944998800874524 0.0 0.0877957966193474 0.8011313693792509 1.3322175457783474 0.050751942228926636 0.01376302744238339 2.1147106015815754e-11 10.674749057478417 0.09399736766631306 PGVIPS(ph)ESNGLSRGSPSKK ddPTM_A549_MK2206_60min_R1 1 PGVIPSESNGLSRGSPSKK 19 2 O94782;C9JWX4;C9JC88 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 PGVIPS(0.262)ES(0.244)NGLS(0.244)RGS(0.244)PS(0.005)KK 44.729 0.0089613 3977000.0 1797.2 1409.5 2238.3 1717.7 2476.5 1583.7 1874.8 1735.9 2715.6 2707.5 3282.8 True False 2100.5234226785965 1481.2375295387371 2555.724597064858 2138.5365771104844 2112.2101305997126 1751.2860828250211 2215.4268921957237 1981.9691409707914 2100.5209359221026 2095.8738695595853 2467.590159329168 0.8512448530957178 0.6002769641217172 1.0357168054842827 0.8666498239285656 0.8559809345219354 0.7097151349076222 0.897809907297573 0.803200293807949 0.8512438453284902 0.8493606045703164 1.0 11.268887082632837 -10.420457769247367 0.5537837119620806 1.017746890380012 0.824004123267857 0.0326789480082037 0.11243247711089942 1.0982545762906768 0.5455844113211467 0.10542167870002267 0.023348069248574858 3.7978886780791384e-11 10.420457769247367 -0.193742767112155 PGVIPS(ph)ESNGLSRGSPSKK ddPTM_A549_PD325901_60min_R1 1 PGVIPSESNGLSRGSPSKK 19 2 O94782;C9JWX4;C9JC88 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 PGVIPS(0.283)ES(0.229)NGLS(0.229)RGS(0.229)PS(0.031)KK 44.729 0.0089613 7127600.0 2676.5 1966.9 2183.6 2250.0 2621.9 2947.5 3305.1 2772.5 2837.5 2510.2 2686.4 True False 2948.21630966484 2132.65756583615 2331.7922270534978 2388.9773898792455 2437.746789063962 2923.496537240512 3430.8773891201154 2717.2003125158267 2718.2497426720497 2351.705543606586 2355.989830492679 1.2513705583560673 0.9052066092280939 0.9897293260242463 1.0140015712120745 1.0347017451065084 1.2408782497287594 1.4562360773869123 1.1533158069479494 1.1537612376296273 0.9981815342194422 1.0 11.202117596525943 -7.042188781584219 24.630419832380642 1.1240825016930265 1.026535133516149 0.12830622682099158 0.14261630522147778 837.3009078049789 488827.30987683777 0.02285779861666504 0.03959360177331069 9.074259993650178e-08 7.042188781584219 -0.09754736817687748 PGVPVEGS(ph)PGRNPGV ddPTM_A549_MK2206_60min_R1 2 PGVPVEGSPGRNPGV 15 1 Q8NE01;Q8NE01-2 Q8NE01 CNNM3 Metal transporter CNNM3 1 PGVPVEGS(1)PGRNPGV;PGVPVEGS(1)PGRNPGV 95.264 1.6635e-05 9262500.0 4056.2 4444.3 4144.4 4236.5 5761.4 4115.7 4029.8 3717.1000000000004 6137.799999999999 5585.5 6274.0 True False 4740.787395431182 4670.495886859888 4732.13823887575 5274.442690183709 4913.905692080428 4551.220642219446 4761.9624974239005 4244.010308141325 4747.598100052539 4323.731670701779 4715.992646408918 1.0052575885675192 0.9903526652901645 1.0034235830454754 1.118416224461256 1.0419663601091946 0.9650610133340771 1.009747651122821 0.8999187713689519 1.0067017605864352 0.916823242715225 1.0 12.203345753404347 -7.243607639793594 24.49371183825986 0.9928016747892177 1.0328023205435823 0.22054448283389938 0.04911879066081563 943.8989703179395 1296539.4783755075 0.006576731470004379 0.01137530656222602 5.706796158225368e-08 7.243607639793594 0.04000064575436468 PGVPVEGS(ph)PGRNPGV ddPTM_A549_PD325901_60min_R1 2 PGVPVEGSPGRNPGV 15 1 Q8NE01;Q8NE01-2 Q8NE01 CNNM3 Metal transporter CNNM3 1 PGVPVEGS(1)PGRNPGV;PGVPVEGS(1)PGRNPGV 123.76 2.4616e-07 11174000.0 6645.9 6559.1 6986.9 7572.0 7702.7 6788.6 6993.0 7138.5 7492.200000000001 7886.200000000001 8104.6 True False 7320.586875547004 7111.858376163453 7461.073049642827 8039.7052427402905 7161.688924872419 6733.315892353156 7259.122441716433 6996.1170174550825 7177.328888827326 7388.263986132689 7107.785579292352 1.0299391834321256 1.0005730050274682 1.049704294876274 1.1311125178231276 1.0075837045136966 0.947315562243441 1.0212917034054858 0.9842892613189399 1.0097841034678339 1.0394607298871643 1.0 12.795184444875396 -6.969733008145677 24.999966494097595 0.9999056483067303 1.05143504255761 0.3179084586816452 0.036343892420654764 180.91178396679425 149429.13562692094 0.004905409629758624 0.009270281584467787 1.0721782472579083e-07 6.969733008145677 0.051529394250879657 PGWLSS(ph)PTLGR ddPTM_A549_MK2206_60min_R1 3 PGWLSSPTLGR 11 0 C9JS59;C9J266;Q5XPI4;Q5XPI4-2 C9JS59 RNF123 E3 ubiquitin-protein ligase RNF123 1 PGWLS(0.145)S(0.852)PT(0.003)LGR;PGWLS(0.124)S(0.873)PT(0.003)LGR;PGWLS(0.024)S(0.781)PT(0.195)LGR 88.056 6.5964e-05 8683800.0 2048.7 1999.6 1759.0 1514.5 3315.2 1939.9 2071.1 1810.6 3284.5 2685.0 3199.9 True False 2394.470474093944 2101.3710990178506 2008.452649884771 1885.5525679884886 2827.5384716188837 2145.1789303985984 2447.3920612473685 2067.258094729947 2540.5659942687225 2078.4566351865124 2405.2765172527747 0.9955073593072065 0.8736505278893943 0.8350194397518825 0.7839234094141088 1.1755565114186548 0.8918637483097989 1.0175096475155783 0.8594679571773723 1.0562469537475345 0.8641237796477783 1.0 11.231987044410987 -6.739993291411154 24.998790803766116 1.0118169585763004 0.8694980394077119 0.17086346155345677 0.1012541660524921 198.71081941259467 231627.52510877952 0.012335566679934148 0.02565999396246627 1.8197289679221634e-07 6.739993291411154 -0.14231891916858852 PGWLSS(ph)PTLGR ddPTM_A549_PD325901_60min_R1 1 PGWLSSPTLGR 11 0 C9JS59;C9J266;Q5XPI4;Q5XPI4-2 C9JS59 RNF123 E3 ubiquitin-protein ligase RNF123 1 PGWLS(0.028)S(0.961)PT(0.01)LGR 151.79 5.903e-12 14185000.0 871.38 668.55 1003.5 1037.9 811.9 849.02 897.56 689.46 1098.5 1068.0 1154.2 True False 959.841856123948 724.8910547764292 1071.6035445357136 1102.008725758075 754.8749449029451 842.1058626116836 931.7171369636783 675.7081794290932 1052.3338651366507 1000.5662977339802 1012.2407170766269 0.9482347824300055 0.7161251691889359 1.058644970961579 1.0886824716364898 0.7457464733122378 0.8319225342403768 0.9204501668876723 0.6675370472949883 1.039608313895744 0.9884667558361387 1.0 9.983336697260134 PHS(ph)IDGR ddPTM_A549_MK2206_60min_R1 2 PHSIDGR 7 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 PHS(1)IDGR;PHS(1)IDGR 68.016 0.0070969 16374700.0 338.5 359.49 150.96800000000002 211.38 411.64 294.004 458.68000000000006 487.26 557.95 505.65999999999997 484.01 True False 395.63052446956635 377.7865054940622 172.3775324888028 263.1681094892089 351.08830129621055 325.1153081359397 542.0162187499121 556.3305971711661 431.575215863064 391.43105480387806 363.8169590035674 1.0874438771439652 1.038397183376924 0.4738029061671987 0.7233530570152131 0.9650135668710484 0.8936232907514128 1.4898047090339113 1.5291497094991415 1.186242711293819 1.0759010681523504 1.0 8.507068984276192 -7.553455390026731 24.989281773517938 1.1591698437892992 0.8479109633309933 0.40821952849317156 0.22198520231534646 205.15385862192457 167664.71421768828 0.037948885864750086 0.05628762006802502 2.7960479180061964e-08 7.553455390026731 -0.31125888045830596 PHS(ph)IDGR ddPTM_A549_PD325901_60min_R1 2 PHSIDGR 7 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 PHS(1)IDGR;PHS(1)IDGR 58.433 0.010069 16337400.0 568.61 361.98 354.44 435.83 622.36 383.7 478.45 326.5 403.72 385.94 504.72 True False 626.3348686114416 392.4853249689203 378.4944298208655 462.7502292582542 578.6475806254423 380.5752744153298 496.6576765678857 319.98770136570516 386.7530523741181 361.5716825350674 442.6426396836898 1.4149899093747889 0.8866866627430839 0.8550790093140048 1.0454262372665524 1.3072567546563993 0.859779967621933 1.1220285441158464 0.7229030208078615 0.8737365488568609 0.8168478364249876 1.0 8.789998622154485 -7.702067346395691 1.9928128033593029 0.9267587880254406 1.066585501615924 0.18416443642635005 0.1852137498110618 0.5642691302348901 4.585637582580154 0.028627069049141828 0.04450084867638416 1.9857869558947175e-08 7.702067346395691 0.13982671359048338 PHVMS(ph)PGNR ddPTM_A549_PD325901_60min_R1 2 PHVMSPGNR 9 0 P54259 P54259 ATN1 Atrophin-1 1 PHVMS(1)PGNR;PHVMS(1)PGNR 66.056 0.0013519 15163400.0 1264.8899999999999 1354.47 1804.0 1039.66 1743.3700000000001 1518.58 1602.21 1198.76 1473.6399999999999 1612.4299999999998 1929.0700000000002 True False 1393.3007016371973 1468.615940412879 1926.43028833326 1103.8774369608252 1620.9217054999967 1506.213187963594 1663.1829783129533 1174.8497913909728 1411.7080355211413 1510.620894620975 1691.806619382263 0.8235578970284083 0.8680755374684143 1.138682321172538 0.6524844059091629 0.9581010541806788 0.8902986728551543 0.9830810207612491 0.6944350364463941 0.8344381794868521 0.8929039981960555 1.0 10.724348956428207 -10.834973724201244 1.1593965779027178 0.9978960585983849 0.8717637059195505 0.025366296690092494 0.12962188765456925 0.7799274268140619 1.9093134690027533 0.07570163290137912 0.019948064639948297 1.4622656421602005e-11 10.834973724201244 -0.12613235267883438 PHVMS(ph)PTNR ddPTM_A549_MK2206_60min_R1 2 PHVMSPTNR 9 0 Q9P2R6;B1AKN3;Q9P2R6-2 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 PHVMS(0.966)PT(0.034)NR;PHVMS(0.979)PT(0.021)NR 57.348 0.0033356 8117500.0 2296.8999999999996 2062.09 1640.48 1402.75 2035.61 1568.19 1638.29 1756.53 2598.6 3112.1 2883.2 True False 2684.5605661865475 2167.041573101479 1873.124731712889 1746.4238129718403 1736.1744655562607 1734.1348249197258 1935.9460866307525 2005.523506647516 2010.0212491114942 2409.0744485526816 2167.2218677281157 1.2387105382065724 0.9999168084129635 0.8642976335766088 0.8058352672505122 0.8011060110685764 0.8001648796288715 0.8932846772445093 0.9253891059847476 0.9274644553206663 1.1115956720564555 1.0 11.081631140486921 -5.31217094551414 3.053066765628797 0.9199888797001455 1.2713994146967975 0.533339352249848 0.08999795723471223 0.1925016350705146 2.7715856215289745 0.01222642707988838 0.15213075661998773 4.8733662856274975e-06 5.31217094551414 0.351410534996652 PHVMS(ph)PTNR ddPTM_A549_PD325901_60min_R1 4 PHVMSPTNR 9 0 Q9P2R6;B1AKN3;Q9P2R6-2 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 PHVMS(0.984)PT(0.016)NR;PHVMS(0.873)PT(0.127)NR;PHVMS(0.991)PT(0.009)NR;PHVMS(0.984)PT(0.016)NR 57.148999999999994 0.0034375 49115200.0 7374.4 6178.06 6256.5 5828.7699999999995 7023.1 5957.8 5763.419999999999 5358.709999999999 6366.0 6972.900000000001 8181.4 True False 8123.043659253648 6698.706798103459 6681.10371339082 6188.799884802865 6529.821684379697 5909.281652102294 5982.750101964437 5251.826325223327 6098.459158361333 6532.629903997441 7175.13966616766 1.1321094831861687 0.9335994990716786 0.9311461552300749 0.8625337167977927 0.9100619623014758 0.8235772301361378 0.8338165360284764 0.7319476093248509 0.849942919873308 0.9104533441767284 1.0 12.808791199199732 -4.99091132625515 1.6113849950323094 0.8949646630132182 1.3799343523057122 0.5287336442765482 0.06818627410995846 1.8011339541599016 2.529672943762911 0.012433940428039176 1.6796998293563852 1.0211479592326909e-05 4.99091132625515 0.48496968929249396 PIFGGTVYHS(ph)PVSR ddPTM_A549_MK2206_60min_R1 2 PIFGGTVYHSPVSR 14 0 O43663-2;O43663-4;O43663;G3V3N7;H0YNE4;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 PIFGGT(0.002)VY(0.265)HS(0.574)PVS(0.159)R;PIFGGT(0.001)VY(0.087)HS(0.888)PVS(0.024)R 69.331 0.00088169 12150100.0 2427.3999999999996 3071.3 2783.1000000000004 2608.3 3443.1000000000004 2839.6 3291.2 2848.8 4628.299999999999 3844.9 3730.8999999999996 True False 2837.085775767874 3227.6160514170456 3177.785429161062 3247.3336170910356 2936.624551046989 3140.084587226072 3889.1684380171596 3252.6261240841 3579.9974398763684 2976.334419600977 2804.414562398317 1.0116499228778848 1.1509054669352485 1.1331368306843481 1.157936369547995 1.047143525219612 1.1196934395251081 1.3868022546178653 1.15982357519299 1.2765578555599777 1.061303296419783 1.0 11.453483916074788 -5.260503363167472 22.173496592776896 1.1476390894445834 1.0116498947272659 0.13069973208196473 0.10199199489671204 31.578826642162664 747419.4870715997 0.016456431784279357 0.13735719510354477 5.489043048870188e-06 5.260503363167472 -0.13598919471731752 PIFGGTVYHS(ph)PVSR ddPTM_A549_PD325901_60min_R1 2 PIFGGTVYHSPVSR 14 0 O43663-2;O43663-4;O43663;G3V3N7;H0YNE4;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 PIFGGT(0.01)VY(0.109)HS(0.765)PVS(0.116)R;PIFGGT(0.084)VY(0.208)HS(0.705)PVS(0.003)R 100.58 9.6056e-06 21513000.0 4003.7 4249.5 4248.8 4478.9 5241.7 5787.1 4475.7 4869.7 6566.1 4812.700000000001 5484.2 True False 4410.152676631839 4607.6202786215445 4537.149118109953 4755.5514806800675 4873.541074883317 5739.971776306891 4646.025212697013 4772.570013294256 6290.149651227826 4508.825300659481 4809.6781672081415 0.9169330095098206 0.9579893120574666 0.9433373627873354 0.9887462976427188 1.0132780002018817 1.193421176377536 0.9659742401005338 0.9922846908620861 1.3078109246712966 0.9374484412283878 1.0 12.231724645994895 -6.931905526872169 0.796560751419599 1.131292188407694 0.9242160718615855 0.05050695415582396 0.11194388575465115 0.6972369140879326 0.8230882295989672 0.022641782333264613 0.07683266337936344 1.1697538227202806e-07 6.931905526872169 -0.20707611654610858 PIPNQPPTAAHTANFLLNAS(ph)GSTSTPAPSR ddPTM_A549_MK2206_60min_R1 1 PIPNQPPTAAHTANFLLNASGSTSTPAPSR 30 0 P53396;P53396-2;P53396-3;K7EIE7 P53396 ACLY ATP-citrate synthase 1 PIPNQPPTAAHTANFLLNAS(0.198)GS(0.198)T(0.198)S(0.198)T(0.198)PAPS(0.009)R 76.611 3.6074e-06 12295000.0 738.87 821.06 915.72 1014.9 1266.6 937.62 969.01 904.53 1797.1 1261.6 1647.0 True False 863.5731923628607 862.8484469691915 1045.5828655784437 1263.5505455605917 1080.2848178548736 1036.8383260582152 1145.0665739313943 1032.749897506947 1390.0597193789988 976.6036837807462 1238.004445112447 0.6975525780801402 0.6969671638705786 0.8445711723462141 1.0206349020385177 0.8726017278207366 0.8375077570614377 0.9249292912089574 0.8342053225932828 1.1228228823142399 0.788853131857731 1.0 10.2738007792871 -3.9599522160234493 0.254629545256684 1.0612559685709326 9.292654468725896e-16 0.12860027007520192 0.11785211227852166 9.447002375563578 0.2715438213659634 0.05067201828116007 3.555275965259143 0.00010965988446272794 3.9599522160234493 -1.0612559685709317 PIPNQPPTAAHTANFLLNASGSTST(ph)PAPSR ddPTM_A549_MK2206_60min_R1 1 PIPNQPPTAAHTANFLLNASGSTSTPAPSR 30 0 P53396;P53396-2;P53396-3;K7EIE7 P53396 ACLY ATP-citrate synthase 1 PIPNQPPTAAHTANFLLNAS(0.084)GS(0.058)T(0.206)S(0.142)T(0.505)PAPS(0.006)R 151.4 2.1083e-36 10564000.0 562.75 921.77 991.07 761.65 987.62 903.24 900.4 766.57 1690.4 1507.7 1216.2 True False 657.728442083452 968.6841558020028 1131.618628607902 948.2542841917676 842.3424062923032 998.8202572778134 1063.9910250336204 875.2336450221673 1307.527099014112 1167.109522856873 914.1839745875881 0.7194705446244234 1.059616207163335 1.2378456197707954 1.0372685482914417 0.9214145398603224 1.0925812364282659 1.1638696964838113 0.9573933358621909 1.430266921495721 1.2766681054362017 1.0 9.836340718861438 -7.979905801672504 1.405408934435807 1.1931910122252936 1.0175027682629891 0.1874598312669421 0.16582319861361666 0.6328289431066764 2.5054153480196124 0.03489808319770231 0.050751882692999295 1.0473556945149512e-08 7.979905801672504 -0.17568824396230442 PIPNQPPTAAHTANFLLNASGSTST(ph)PAPSR ddPTM_A549_PD325901_60min_R1 2 PIPNQPPTAAHTANFLLNASGSTSTPAPSR 30 0 P53396;P53396-2;P53396-3;K7EIE7 P53396 ACLY ATP-citrate synthase 1 PIPNQPPTAAHTANFLLNAS(0.074)GS(0.074)T(0.074)S(0.202)T(0.555)PAPS(0.019)R;PIPNQPPTAAHTANFLLNAS(0.032)GS(0.054)T(0.054)S(0.185)T(0.636)PAPS(0.039)R 137.31 6.2484e-28 42771000.0 2791.9 2347.5 3116.4 3560.3 3463.2 3999.3999999999996 3964.8 3699.8 3669.2 3785.2000000000003 2626.2 True False 3075.3316327118487 2545.332063551968 3327.8976444355717 3780.2116449720356 3219.9567793914025 3966.830212396842 4115.682633621806 3626.004586563047 3514.9962839867085 3546.2018260137247 2303.194048853438 1.3352464306004923 1.1051313999439474 1.4449054547063656 1.641290991896179 1.3980397270452927 1.7223169773174716 1.7869456703705233 1.574337424312173 1.5261398776783583 1.5396886891832122 1.0 11.169420250949116 -10.56391763077896 0.8816888459948575 1.0030877621772054 1.506222792038766 0.0 0.23747368553611817 0.40931409361803817 0.5742061673426488 0.1290224634092081 0.03678279565667037 2.7294954156618006e-11 10.56391763077896 0.5031350298615607 PIPQT(ph)PESAGNK ddPTM_A549_MK2206_60min_R1 2 PIPQTPESAGNK 12 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PIPQT(0.998)PES(0.002)AGNK;PIPQT(0.817)PES(0.183)AGNK 203.39 7.889100000000001e-25 20715000.0 11667.099999999999 10302.1 12421.5 10281.8 17005.8 12740.599999999999 11523.4 12080.3 16718.6 15999.1 16218.900000000001 True False 13636.221246791361 10826.43288617313 14183.055480695673 12800.84146156754 14504.269347447034 14088.801835474182 13617.05261869437 13792.719519367163 12931.86379411815 12384.892198142477 12191.29951113191 1.1185207314724808 0.8880458458335375 1.1633751978404834 1.0499981113481014 1.1897229933694224 1.1556439756573658 1.1169484111403054 1.1313576134170924 1.0607453112205165 1.0158795776310636 1.0 13.57356429536332 -9.544047167082162 1.1051816111615829 1.0127429702824464 1.0989389208818159 0.17005338264878356 0.07711563415469487 0.5355419060878813 1.3579363004099159 0.020956154040668827 0.015253526055679319 2.857280208119435e-10 9.544047167082162 0.08619595059936946 PIPQT(ph)PESAGNK ddPTM_A549_PD325901_60min_R1 3 PIPQTPESAGNK 12 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 PIPQT(0.996)PES(0.004)AGNK;PIPQT(0.995)PES(0.005)AGNK;PIPQT(1)PESAGNK 185.57 3.0252e-19 37554500.0 16670.300000000003 15528.9 17933.8 15908.8 21745.3 17015.6 18300.9 18948.100000000002 19222.5 18091.4 19316.6 True False 18362.656583973763 16837.574901679298 19150.895512700117 16891.450444493763 20217.985145212468 16877.0305951042 18997.350764136736 18570.165281003112 18414.6451730444 16949.105916502358 16940.78065801625 1.0839321371701187 0.9939078512129772 1.1304612165932304 0.9970880790845288 1.1934506179705164 0.9962368875319871 1.1213975995343126 1.0961812006116642 1.0870009797530036 1.0004914329896697 1.0 14.048212737424906 -10.687854493218444 0.9316889342533481 0.999623552077644 1.0773737163649422 0.200105120443819 0.05941200969313737 0.7073951852769952 1.0843968272708893 0.036845660752222724 0.009520753149636131 2.0518495189209614e-11 10.687854493218444 0.0777501642872982 PIQS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 PIQSPGR 7 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 PIQS(1)PGR 55.549 0.039764 8130800.0 1557.0 1536.7 1509.4 1388.8 2092.5 2336.9 1353.0 1520.7 2393.6 2244.8 2339.1 True False 1819.7835350047715 1614.9114662236104 1723.4556166776995 1729.056062345601 1784.6960219179894 2584.1892068913266 1598.8225864843255 1736.263881948432 1851.4534217937621 1737.6981209186913 1758.2369141241797 1.0350047370671032 0.9184834269209032 0.9802180825763144 0.9834033448256235 1.0150486590181673 1.4697616607478485 0.9093328513585085 0.987502803519119 1.0530170348038768 0.9883185291808532 1.0 10.779913764587896 -6.864355218312736 5.51661704394984 1.0480086708894425 0.9754989634111055 0.07048338681343602 0.13948609304050563 0.5349656930790977 24.492245866833397 0.0198117623432946 0.038022809119916415 1.3666105896754502e-07 6.864355218312736 -0.07250970747833696 PIRPGQHPAAS(ph)PTHPSAIR ddPTM_A549_MK2206_60min_R1 2 PIRPGQHPAASPTHPSAIR 19 1 P33176 P33176 KIF5B Kinesin-1 heavy chain 1 PIRPGQHPAAS(0.995)PT(0.005)HPSAIR;PIRPGQHPAAS(0.885)PT(0.115)HPSAIR 71.527 0.00036636 10480500.0 2473.6 2303.8 1654.1100000000001 1430.77 2168.8 1938.5900000000001 1232.07 1711.38 2126.3 2578.8999999999996 3155.1 True False 2891.0832062863196 2421.053579674597 1888.687670665661 1781.3087142297054 1849.7723929919885 2143.7303070681055 1455.9211708276016 1953.9733558814398 1644.6964450033759 1996.3246988761632 2371.6015936698745 1.2190425297415095 1.0208517257437828 0.7963764553484969 0.7510994759761754 0.7799675957080149 0.9039167087718324 0.6138978716803244 0.8239045550892102 0.6934960953784536 0.8417622522284619 1.0 11.21164595596561 -5.502347651818962 2.696946289288248 0.822705149993006 1.219613260961237 0.6254718293013424 0.09911526824170447 0.20582971162366925 2.6125479883110505 0.017866016066050837 0.14122955873927628 3.1452295564636705e-06 5.502347651818962 0.39690811096823087 PIRPGQHPAAS(ph)PTHPSAIR ddPTM_A549_PD325901_60min_R1 2 PIRPGQHPAASPTHPSAIR 19 1 P33176 P33176 KIF5B Kinesin-1 heavy chain 1 PIRPGQHPAAS(0.991)PT(0.009)HPSAIR;PIRPGQHPAAS(0.995)PT(0.005)HPSAIR 85.24799999999999 2.8475e-05 10651800.0 2565.75 2458.6 1673.0 2308.7 2867.6000000000004 2282.9 2389.6 2352.69 2400.0 2843.8 3227.7 True False 2826.2230511946796 2665.7948504574515 1786.5398405662677 2451.3031555618736 2666.1896686829473 2264.3088192930823 2480.5375356392933 2305.7637523004005 2299.1363462248187 2664.2419826740547 2830.7133620760947 0.9984137175661891 0.9417395933378119 0.6311270736560866 0.8659665752112906 0.9418790699202116 0.7999074896203544 0.8762941415657938 0.8145521843332498 0.8122109348926067 0.9411910150874665 1.0 11.466949954058444 -10.815646281935107 1.0220888777434576 1.0014570693669123 0.8484705641580801 0.17968145135785152 0.09339144035376114 0.5913608556370379 1.079802400094214 0.0661147929898059 0.015789024487757968 1.5288107155654145e-11 10.815646281935107 -0.15298650520883217 PIS(ph)PSPSAILER ddPTM_A549_PD325901_60min_R1 1 PISPSPSAILER 12 0 Q5T5P2;Q5T5P2-3;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-10;Q5T5P0;Q5T5P1 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 PIS(0.843)PS(0.124)PS(0.032)AILER 51.286 0.027275999999999998 1324600.0 999.6 997.67 849.28 758.88 1178.9 865.52 1150.5 1277.0 1011.3 814.84 1105.3 True False 1101.0786561333728 1081.7471522231692 906.917247935517 805.7542940584723 1096.0981309842123 858.4714920822413 1194.2829070777566 1251.5292332128795 968.7985778904829 763.3908633385355 969.3551070739871 1.1358878166505928 1.1159451725471785 0.9355882496694738 0.831227161417299 1.1307498387178263 0.8856109446553083 1.2320385979939976 1.2910946918004478 0.9994258768747976 0.7875244662844375 1.0 9.920881459506754 PKIEDVGS(ph)DEEDDSGKDK ddPTM_A549_PD325901_60min_R1 1 PKIEDVGSDEEDDSGKDK 18 2 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 PKIEDVGS(1)DEEDDSGKDK 138.35 7.3586e-14 22631000.0 4713.9 4403.1 5738.9 5267.4 5907.0 5358.5 4997.7 5210.4 3949.9 5317.8 5749.0 True False 5192.451657810229 4774.164689680792 6128.376264809174 5592.755334866638 5492.112698043723 5314.862152605013 5187.890208346375 5106.474484520276 3783.8994391472525 4982.033200458576 5041.909445913644 1.0298581744697133 0.9468961592616756 1.215487174164956 1.1092534276670603 1.0892922129918376 1.0541367729070563 1.0289534677285894 1.012805671997731 0.750489369104798 0.9881242917792591 1.0 12.299754491889779 -8.565076038242605 8.803559149472356 0.8819809765722212 1.067160936620023 0.3607117981857664 0.08751082370215062 0.2204315161484574 42.61204543447131 0.018010132653104922 0.020444777212898495 2.7222246469448233e-09 8.565076038242605 0.1851799600478018 PKIEDVGS(ph)DEEDDSGKDKK ddPTM_A549_MK2206_60min_R1 2 PKIEDVGSDEEDDSGKDKK 19 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 PKIEDVGS(0.999)DEEDDS(0.001)GKDKK;PKIEDVGS(0.995)DEEDDS(0.005)GKDKK 44.258 0.008683100000000001 12735300.0 1626.54 1781.3000000000002 1896.13 1412.32 2215.5 1608.65 1540.79 1538.42 2495.7 2130.01 2387.3 True False 1901.0601869150025 1871.9605614525385 2165.0297458931286 1758.3384634014546 1889.6028848551034 1778.8762752645525 1820.7315986911929 1756.4957462136551 1930.4279348139598 1648.8392616438086 1794.4675238718553 1.059400720060487 1.0431844190824247 1.2065026070918938 0.9798664172018859 1.0530159279661848 0.9913114902332353 1.014636138280546 0.9788395291901021 1.0757664371928826 0.9188459750367451 1.0 10.809340098274149 -6.311046907753357 24.999984921454264 1.0259751375952644 1.097045571332242 0.32022178713016247 0.058261712663209834 338.0914668967336 170382.6243486288 0.006965489649113974 0.016186383408242872 4.885995832946007e-07 6.311046907753357 0.07107043373697763 PKIEDVGS(ph)DEEDDSGKDKK ddPTM_A549_PD325901_60min_R1 1 PKIEDVGSDEEDDSGKDKK 19 3 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 PKIEDVGS(1)DEEDDSGKDKK 128.52 3.5085e-17 52602000.0 3718.4 4362.9 4290.7 4578.5 4738.9 4409.4 4792.0 4232.1 3628.2 4462.1 5022.5 True False 4095.889230658601 4730.576894598881 4581.892704075122 4861.303546472056 4406.056012317485 4373.491308331912 4974.362182283016 4147.687445481778 3475.7193714053674 4180.362244493252 4404.764340250701 0.9298770409191698 1.073968214683112 1.0402129036066297 1.1036466814012054 1.0002932443070747 0.9929001804630008 1.1293140331770612 0.9416366291336505 0.7890817993698941 0.949054687510325 1.0 12.10484912009693 -8.507908767303665 23.659849973283826 0.898555502096907 1.039021759126871 0.3994645088240537 0.07001107819942988 278.2270093295545 439734.74783116725 0.01443304306438313 0.01713931689709204 3.1052118347168526e-09 8.507908767303665 0.14046625702996385 PKIES(ph)PKLER ddPTM_A549_PD325901_60min_R1 2 PKIESPKLER 10 2 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4;Q5TBM3 A0A0A0MSM0 HSPH1 Heat shock protein 105 kDa 1 PKIES(1)PKLER;PKIES(1)PKLER 57.803999999999995 0.0025594999999999997 47436000.0 4571.5 3941.8 5093.6 4491.7 5753.5 6129.0 6195.3 5090.8 6093.6 5169.8 5350.4 True False 5035.595314639571 4273.989319748301 5439.282326305041 4769.142107609158 5349.394008497468 6079.087456063476 6431.065531698238 4989.260000344656 5837.507183064816 4843.37794571641 4692.334718980057 1.073153476087513 0.9108449366283295 1.1591846387905047 1.0163686934605118 1.1400282223814229 1.2955357663369864 1.3705470553251833 1.0632787938515051 1.2440517423986492 1.0321893547204544 1.0 12.196090213669795 -6.791309399765221 9.057877094739204 1.1487268720745514 1.039203865808638 0.19407263888648663 0.11888243163062852 0.453044794255228 127.69312957226705 0.019573054067671358 0.037352308058370275 1.616927696739739e-07 6.791309399765221 -0.10952300626591338 PKPAPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 PKPAPSPK 8 1 A1X283 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 PKPAPS(1)PK 44.765 0.015688 3011700.0 1963.9 2077.1 2138.5 1606.3 3195.9 2455.2 1901.9 1788.1 3242.2 3091.4 3166.5 True False 2295.358307254894 2182.8155179885866 2441.7714563835048 1999.8435721095484 2725.7873435831293 2715.0076343701394 2247.450611407642 2041.5686508265858 2507.8468767295026 2393.050592929455 2380.17065904588 0.9643671131443222 0.9170836173838033 1.0258808321594546 0.8402101607752823 1.1452066822283216 1.1406777173946354 0.9442392724513964 0.8577404494369212 1.0536416232165484 1.0054113489024936 1.0 11.216849303629058 -6.752161612127652 24.999901746982648 1.0225345998281279 0.9418278720583948 0.17807605423117012 0.08664114339830013 291.64609275797767 785864.4449512681 0.012499631462451066 0.02574383437649664 1.7694503778696995e-07 6.752161612127652 -0.08070672776973309 PKPPS(ph)GK ddPTM_A549_PD325901_60min_R1 1 PKPPSGK 7 1 Q9UBC2;Q9UBC2-2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 PKPPS(1)GK 45.161 0.020499 4011300.0 2760.5 2622.9 3092.6 2565.7 3499.4 2610.5 2559.8 2651.8 2848.2 3414.1 3605.5 True False 3040.743927827306 2843.9409880683506 3302.4824333145484 2724.1774618725244 3253.6142162746223 2589.240953508517 2657.214589776306 2598.9077687031445 2728.5000588823023 3198.5331433460487 3162.046357147615 0.9616379977965497 0.8993988913665968 1.0444130352009187 0.8615235686582159 1.0289584176778508 0.8188497767136445 0.8403465002243984 0.8219069156998506 0.8628905938442972 1.011538978900786 1.0 11.626642803129 -7.248399996058876 24.93985543215304 0.9091165325858702 0.9551739464739927 0.13462590304024769 0.07786977712455417 1829.6875530729283 3499561.874164265 0.012394081017473732 0.021383121262850874 5.6441689329709745e-08 7.248399996058876 0.046057413888122456 PKPRPS(ph)PSSTR ddPTM_A549_PD325901_60min_R1 1 PKPRPSPSSTR 11 2 M0QZR4;M0QYC1;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 PKPRPS(0.947)PS(0.033)S(0.008)T(0.011)R 62.287 0.0015078 10401000.0 1936.2 1545.6 1917.5 1700.9 2379.3 1530.5 1670.9 1738.8 2070.0 2102.7 2211.2 True False 2132.7615986448964 1675.8531362836711 2047.633080864205 1805.960729975827 2212.186176139397 1518.0361154356583 1734.4870138515641 1704.1182699377873 1983.0050986189058 1969.9351631509733 1939.2364179516878 1.0997945268053593 0.8641819639782681 1.0558965693450677 0.93127414133619 1.1407511511546444 0.7828009526755273 0.894417512890775 0.8787573573611807 1.0225700591542357 1.0158303262640411 1.0 10.921272981977172 PKPS(ph)SSPVIFAGGQLTK ddPTM_A549_PD325901_60min_R1 1 PKPSSSPVIFAGGQLTK 17 1 F8VZX2;H3BRU6 F8VZX2 PCBP2 1 PKPS(0.42)S(0.29)S(0.29)PVIFAGGQLTK 105.67 3.2036e-09 4849300.0 3127.6 3157.8 3180.7 3268.7 4439.0 3715.6 3599.2 4323.5 4609.4 3720.1 3834.9 True False 3445.111649582571 3423.9188883000656 3396.5614291028846 3470.600175243685 4127.2199537186525 3685.341385503253 3736.169525557812 4237.264400779866 4415.68294762028 3485.2122511237617 3363.231611434027 1.0243456435977156 1.0180443346987222 1.009910057206749 1.031924225332753 1.2271590037650941 1.0957738899022431 1.1108867771270652 1.259878857695788 1.3129285930258918 1.036268878799496 1.0 11.715632419209443 -6.672135781895746 7.517154001748528 1.1572281914634304 1.0185518480846363 0.32642176139321677 0.08797437134460478 0.2747307790341733 19.99619847464858 0.01692697905200888 0.03531992651585876 2.127473788654309e-07 6.672135781895746 -0.1386763433787941 PKPSSS(ph)PVIFAGGQDR ddPTM_A549_MK2206_60min_R1 3 PKPSSSPVIFAGGQDR 16 1 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 PKPS(0.009)S(0.146)S(0.845)PVIFAGGQDR;PKPS(0.003)S(0.129)S(0.868)PVIFAGGQDR;PKPS(0.005)S(0.024)S(0.971)PVIFAGGQDR 173.03 1.2174999999999998e-28 139182000.0 15934.9 15422.0 17768.5 14009.6 22958.7 17541.1 17507.8 18357.8 26653.4 24868.5 23054.8 True False 18624.32154909923 16206.913927312098 20288.340482932093 17441.95262891485 19581.505643205983 19397.287559160184 20688.74063536608 20960.07436840463 20616.447456733735 19250.688578076646 17329.65687988977 1.0747080382596528 0.9352126265188457 1.1707294970436335 1.0064799753280396 1.129941912810136 1.1193116917202093 1.1938344064604283 1.2094915966124973 1.1896627613359225 1.110852263925441 1.0 14.080955469559246 -5.764237514111525 24.999374644086526 1.1093726075713393 1.0049603381737118 0.2627477726066121 0.07396045076272352 89.34868385337762 798305.0715451312 0.0124426928266536 0.04133949297696154 1.7209271486253815e-06 5.764237514111525 -0.10441226939762749 PKPSSS(ph)PVIFAGGQDR ddPTM_A549_PD325901_60min_R1 2 PKPSSSPVIFAGGQDR 16 1 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 PKPS(0.003)S(0.123)S(0.874)PVIFAGGQDR;PKPS(0.02)S(0.102)S(0.878)PVIFAGGQDR 178.84 3.1693e-29 198317000.0 26520.0 21763.0 28747.0 24723.0 34612.0 24564.0 29417.0 28656.0 30097.0 28300.0 27480.0 True False 29212.290877007847 23597.04438725515 30697.944289754025 26250.083559993145 32180.972524917757 24363.958928168242 30536.48003260005 28084.4335998029 28832.127755136808 26513.133170291796 24100.13421007253 1.2121215019955662 0.9791250198678514 1.2737665285251387 1.0892090197996513 1.335302627130926 1.0109470227757258 1.2670668041274842 1.16532270546714 1.1963471864437403 1.1001238806052276 1.0 14.556753560181738 -10.751184249053312 0.9168498140872915 0.9961339527759657 1.169085771508937 0.13361626059274845 0.1075207802965195 0.6028249143090328 0.8675648232320179 0.07115118031658403 0.01664339174855385 1.773436942201107e-11 10.751184249053312 0.17295181873297139 PKS(ph)VHREESCSDSGTK ddPTM_A549_PD325901_60min_R1 1 PKSVHREESCSDSGTK 16 2 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 PKS(0.94)VHREES(0.027)CS(0.032)DS(0.001)GTK 44.816 0.00997 2761800.0 546.4 683.05 814.28 881.16 746.96 731.57 693.67 605.92 806.28 825.18 890.92 True False 601.8701257615797 740.6130206641833 869.5419374634193 935.5872519404425 694.4961064721075 725.6123364712607 720.0679914407888 593.8344502649553 772.3948555142273 773.0779939739006 781.3424880071983 0.7703025689754054 0.9478724529023184 1.1128819318160623 1.1974099275295307 0.8888497901136911 0.9286738499552527 0.921577928364437 0.7600181218603902 0.9885483861042911 0.9894226998273494 1.0 9.609811257274316 -5.288734414105526 4.316463235005262 0.9831795668149611 0.7592235659360238 0.22580217930388735 0.10821724999279903 0.21012325127324952 8.704526551282251 0.015053606071484217 0.13500211266036452 5.143581029543946e-06 5.288734414105526 -0.2239560008789373 PKT(ph)ISVR ddPTM_A549_MK2206_60min_R1 1 PKTISVR 7 1 P26038 P26038 MSN Moesin 1 PKT(0.997)IS(0.003)VR 43.512 0.034977999999999995 1847100.0 471.07 520.29 855.98 708.15 1157.5 794.32 575.06 574.9 1245.6 1051.0 940.0 True False 550.5750994442501 546.7705386617308 977.3708352747958 881.6467817900619 987.2332833309786 878.3744151730575 679.5409583027911 656.3938355574096 963.4735888144678 813.5783700487985 706.5720573197934 0.7792200296353647 0.7738354963197523 1.383257128766471 1.247780424737388 1.3972152919205498 1.2431490972130343 0.9617433229392934 0.9289835746509386 1.363588580716264 1.151444302984337 1.0 9.464692886125745 -5.742246189324865 24.647587033064568 1.1801642032011128 0.7765272334047928 0.4998652357609925 0.1580101848867054 150.12027153096759 192778.3089308261 0.025205022850704438 0.09729383990951945 1.8103135858514143e-06 5.742246189324865 -0.40363696979632 PKT(ph)ISVR ddPTM_A549_PD325901_60min_R1 1 PKTISVR 7 1 P26038 P26038 MSN Moesin 1 PKT(1)ISVR 72.643 0.0077645 5727100.0 1534.1 1238.2 1156.1 1480.3 1900.3 1459.7 1644.1 1788.1 1995.7 1582.6 1876.8 True False 1689.8407026552698 1342.5474594632783 1234.55989819406 1571.7347689947774 1766.8294836791067 1447.8126871619918 1706.667125186041 1752.4349427626855 1911.827669233695 1482.6743659117944 1645.9654980154326 1.026656211623353 0.8156595390863355 0.7500521120780411 0.9549014064327859 1.0734304490643345 0.8796130228170901 1.036879039836374 1.06468510116137 1.1615235383358986 0.9007931014954318 1.0 10.68471837961742 -7.1966470989624645 0.8795872896251054 1.0750695374148147 0.8693653421826433 0.181919239133833 0.10572919630337137 0.44334906240207533 0.6705928654898344 0.01777515877632368 0.04549708660452732 6.3584740183566e-08 7.1966470989624645 -0.20570419523217143 PLDGEWGT(ph)NPR ddPTM_A549_MK2206_60min_R1 1 PLDGEWGTNPR 11 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 PLDGEWGT(1)NPR 79.693 0.00099699 1366500.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 124.16 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 93.32764535832506 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 6.544232591973148 -10.632928445752034 0.679319263200112 1.082152444714398 6.834839394132852e-26 0.0 0.29327865860305147 0.06440817340675754 0.046900237562256634 0.039956722371451286 0.008142451977166855 2.328474864986929e-11 10.632928445752034 -1.082152444714398 PLEGSSSEDSPPEGQAPPS(ph)HSPR ddPTM_A549_MK2206_60min_R1 1 PLEGSSSEDSPPEGQAPPSHSPR 23 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 PLEGSSSEDSPPEGQAPPS(0.5)HS(0.5)PR 57.347 0.0010245 13346000.0 499.01 714.74 649.33 671.76 852.85 816.67 546.94 736.61 1092.6 889.03 870.29 True False 583.2306883768342 751.1172130986292 741.4147579020341 836.3412301564522 727.3968947635639 903.0894773383275 646.3119182939669 841.0267232735148 845.1278445236735 688.1975055418499 654.1729742179184 0.8915542392653906 1.1481935859496646 1.1333619503135477 1.278471081989165 1.1119335763345874 1.3805056352534213 0.9879832150917734 1.2856335501768246 1.29190271966531 1.0520115209048626 1.0 9.353528348511881 -5.254474744636739 4.19132217988606 1.1633636310684132 0.8680344823161649 0.2946829291188954 0.12257823380792984 0.2526151922652303 9.785859319619618 0.018228508879425436 0.22450983184737153 5.565769997295953e-06 5.254474744636739 -0.29532914875224836 PLEGSSSEDSPPEGQAPPS(ph)HSPR ddPTM_A549_PD325901_60min_R1 1 PLEGSSSEDSPPEGQAPPSHSPR 23 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 PLEGSSSEDSPPEGQAPPS(0.661)HS(0.339)PR 108.39 6.2381e-11 38927000.0 3024.0 2410.8 2874.7 3056.2 3423.6 3194.2 2403.5 2969.9 3434.7 3508.4 3621.4 True False 3330.9942538488585 2613.9665767033357 3069.7944289754037 3244.9745328661984 3183.1381467788196 3168.1874942336335 2494.9665077456657 2910.663014658523 3290.351503490992 3286.8790252527097 3175.9907579460187 1.0488047691936875 0.8230397302521888 0.9665627714108039 1.0217203953593343 1.0022504438386413 0.9975430458376296 0.7855710856536667 0.9164582760123997 1.0360078962002184 1.0349145434473508 1.0 11.63299099894244 -8.764861199617561 24.997944656534255 1.017003731299315 0.9427512994706408 0.1684652133544382 0.07704285612198863 118.51718843183285 865819.162461427 0.013227071428417251 0.014357784608005287 1.7184575178944905e-09 8.764861199617561 -0.07425243182867414 PLEGSSSEDSPPEGQAPPSHS(ph)PR ddPTM_A549_MK2206_60min_R1 2 PLEGSSSEDSPPEGQAPPSHSPR 23 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 PLEGSSSEDSPPEGQAPPS(0.483)HS(0.517)PR;PLEGSSSEDSPPEGQAPPS(0.342)HS(0.658)PR 173.92 4.8686e-41 47777000.0 4513.700000000001 5063.5 5426.9 4832.4 6095.9 4814.8 5067.3 5124.0 8234.0 6817.0 6842.0 True False 5275.5022106300785 5321.210522042852 6196.516023683721 6016.33821693468 5199.201185189897 5324.298940194424 5987.962817806375 5850.342691591874 6369.012146996088 5277.034965387884 5142.942570406412 1.0257750574518258 1.0346626370401706 1.2048581019239442 1.1698241103359723 1.0109389933901283 1.0352631528167502 1.1643067632647484 1.137547738770406 1.2383984576543283 1.026073088148615 1.0 12.328378328328645 -7.7676044840206595 24.970182478237824 1.1212337097428688 1.0847386375576464 0.03267082347218697 0.08265422044811217 533.2931167826603 2159968.555413043 0.01620701918172259 0.022700226798412503 1.7076368416471775e-08 7.7676044840206595 -0.03649507218522241 PLEGSSSEDSPPEGQAPPSHS(ph)PR ddPTM_A549_PD325901_60min_R1 1 PLEGSSSEDSPPEGQAPPSHSPR 23 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 PLEGSSSEDSPPEGQAPPS(0.17)HS(0.83)PR 194.59 5.212999999999999e-61 36880000.0 4811.3 4682.8 4096.8 4377.7 5416.2 5123.8 5542.4 5309.7 4801.6 5645.3 6129.3 True False 5299.739634108144 5077.43599028803 4374.833484059703 4648.100586521941 5035.784796875636 5082.0734715904755 5753.319064917653 5203.793868120929 4599.805450013789 5288.8547945670725 5375.4349568339685 0.9859182887833866 0.9445628179042362 0.8138566495903428 0.8646929269626186 0.9368143856849158 0.945425535310304 1.070298331412841 0.9680693580907669 0.8557085123252963 0.9838933662183329 1.0 12.392165780699811 -6.929124178640079 9.003905625653632 0.9454973536993442 0.8990125315477578 0.1372729398492316 0.06512164368742651 0.6964262917597356 81.50554214954008 0.01122455421464084 0.021244874863877307 1.1772693065586104e-07 6.929124178640079 -0.046484822151586336 PLGAAPQAEHQGLPVPGS(ph)PGGQK ddPTM_A549_MK2206_60min_R1 2 PLGAAPQAEHQGLPVPGSPGGQK 23 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 PLGAAPQAEHQGLPVPGS(1)PGGQK;PLGAAPQAEHQGLPVPGS(1)PGGQK 104.14 1.125e-10 9225600.0 2334.38 2785.0 2502.0 2336.4 4017.8 3123.3 2614.4 2480.6000000000004 4204.4 4143.2 4962.2 True False 2728.3662738885264 2926.7446043032155 2856.8212222920415 2908.8181048849833 3426.786942347476 3453.8055329212516 3089.4026386582586 2832.232646518894 3252.110113047167 3207.248242422628 3729.9487902471064 0.7314755315200384 0.7846608006940816 0.7659143283044321 0.7798547026947993 0.9187222492994209 0.9259659387153247 0.8282694515099731 0.7593221263317292 0.8718913572086112 0.8598638809221159 1.0 11.864940108020964 -14.999999999993824 0.0771890973661639 1.6298756999666055 0.6220770892263674 0.2824285229982717 0.06813901790557361 82.39389268684204 0.4718789401727231 8.926071914405465 0.990217150970156 1.0000000000142217e-15 14.999999999993824 -1.0077986107402381 PLGAAPQAEHQGLPVPGS(ph)PGGQK ddPTM_A549_PD325901_60min_R1 2 PLGAAPQAEHQGLPVPGSPGGQK 23 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 PLGAAPQAEHQGLPVPGS(1)PGGQK;PLGAAPQAEHQGLPVPGS(1)PGGQK 114.2 1.2651e-15 13739800.0 4682.5 4718.6 5004.6 5246.0 6463.0 5395.9 5613.4 5644.2 6018.4 5886.700000000001 6221.4 True False 5157.863952925692 5116.252981928142 5344.242251104567 5570.033505469568 6009.061176139589 5351.957579404943 5827.021008770344 5531.622003210758 5765.467577549769 5515.012757369491 5456.207240703974 0.9453203893076851 0.937694034742718 0.9794793370816023 1.0208617927699732 1.1013256848660837 0.9808933831322763 1.0679618188436932 1.0138218288235425 1.0566804601076505 1.010777727837539 1.0 12.413682727311876 -6.080539256125665 2.658836020252497 1.0311231132893743 0.9421392019221145 0.5539756911336835 0.032029244930504776 0.1587556178652125 2.1723155369080853 0.004576834629430364 0.015337558995239168 8.307316250031794e-07 6.080539256125665 -0.0889839113672598 PLKPLS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 PLKPLSPLR 9 1 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 PLKPLS(1)PLR;PLKPLS(1)PLR 76.533 0.00055352 25246000.0 5639.9 4155.3 5528.8 4275.2 6521.6 5568.3 4845.9 4853.2 6667.1 6868.3 5853.1 True False 6591.777237683624 4366.787021278691 6312.866975942542 5322.624191921022 5562.281279111284 6157.533810061609 5726.337303654393 5541.155962301655 5157.012495170951 5316.746259758485 4399.613732657959 1.4982627199186649 0.9925387287671192 1.4348684588109784 1.209793521738428 1.2642658235705881 1.3995623671129942 1.3015545571985734 1.2594641936791233 1.1721511952039982 1.2084575107793507 1.0 12.103161151493637 -9.516698100570446 0.6985200683320304 1.0191995456243332 1.2943783732217407 0.1886902800792548 0.13829562646127114 0.3925398339639635 0.4165506148634833 0.04491975563037934 0.027291861074840832 3.042999629141592e-10 9.516698100570446 0.2751788275974074 PLKPLS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 PLKPLSPLR 9 1 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 PLKPLS(1)PLR;PLKPLS(1)PLR 78.705 0.00050513 45479000.0 8118.700000000001 6771.200000000001 9012.4 7111.3 10666.0 6873.2 7667.0 8161.5 8646.7 8264.2 9264.2 True False 8942.904447328954 7341.832787528471 9624.035659963787 7550.548850065905 9916.856955702446 6817.226938002195 7958.771880543386 7998.712479927113 8283.309268709218 7742.3970016228095 8124.762130602392 1.1006973870219512 0.9036366443117182 1.1845313752281181 0.9293255271592901 1.2205719744520303 0.8390678801936503 0.9795698326436174 0.9844857426409439 1.019514065219171 0.9529382986439219 1.0 12.988109860395303 -7.265834076332476 24.98525869420953 0.9942641530291692 1.057432344536027 0.17476010739021186 0.10067082282207293 688.0045074223203 3911530.412252684 0.01337697588647622 0.02183585670812037 5.422080032263322e-08 7.265834076332476 0.06316819150685782 PLKQT(ph)PIVPFR ddPTM_A549_PD325901_60min_R1 1 PLKQTPIVPFR 11 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 PLKQT(1)PIVPFR 48.70399999999999 0.01179 4781600.0 1529.0 1538.9 1713.1 1758.0 1600.8 1411.7 1852.3 1511.4 1934.4 2142.8 1617.9 True False 1684.2229544096917 1668.5885037700202 1829.361267707155 1866.587667292318 1488.365330460198 1400.2035832476427 1922.7902901174527 1481.2539413296365 1853.1038950572042 2007.503242307463 1418.908556713113 1.1869848458107666 1.1759662001301114 1.2892735469471348 1.31550948682433 1.0489508456471508 0.9868173510005464 1.3551192436048003 1.0439389728968482 1.3060065684217876 1.4148221411518045 1.0 10.47056590082063 -11.033733622985272 1.3166012812629686 0.9995923954338369 1.2000907843089792 0.0 0.16901427918583228 0.47294629796458654 1.4560283924875668 0.08442753972161268 0.018788319417672616 9.252655168476903e-12 11.033733622985272 0.20049838887514226 PLLMES(ph)EEEDESCRPPPGK ddPTM_A549_MK2206_60min_R1 1 PLLMESEEEDESCRPPPGK 19 1 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 AAK1 Uncharacterized protein FLJ45252 1 PLLMES(1)EEEDESCRPPPGK 49.606 0.0038746 3848300.0 2998.9 3293.2 2673.4 2758.4 3431.7 2688.7 2731.7 2746.3 4084.1 3891.9 4392.0 True False 3505.0410039343647 3460.8098136055137 3052.5283196145224 3434.208123829281 2926.9014759455017 2973.216449385384 3228.0145303024633 3135.5964351910143 3159.0578709675424 3012.71708695806 3301.3451869665255 1.061700853873753 1.048302924295388 0.9246316718608177 1.040245090815492 0.8865784430845642 0.9006075647961411 0.9777876433662356 0.9497935712903106 0.9569002003908216 0.912572577642608 1.0 11.688838278565944 -5.675536957262591 7.323750513305968 0.9670174970194169 1.0573083605243903 0.4056679890606072 0.045392211495560816 0.17272268862642465 12.432341406970583 0.005916443451379502 0.023183672698286778 2.1108775583070813e-06 5.675536957262591 0.0902908635049734 PLLMES(ph)EEEDESCRPPPGK ddPTM_A549_PD325901_60min_R1 1 PLLMESEEEDESCRPPPGK 19 1 A0A096LNZ0;A0A096LP25;Q6ZSR9 A0A096LNZ0 AAK1 Uncharacterized protein FLJ45252 1 PLLMES(0.999)EEEDES(0.001)CRPPPGK 77.959 8.053800000000001e-05 7899200.0 3724.9 3222.3 3506.0 3737.0 4344.4 4076.4 3811.8 4013.4 3084.1 4190.3 3825.8 True False 4103.049105873549 3493.854529662836 3743.938243290696 3967.8260026572193 4039.2643313663675 4043.203149926112 3956.8601348969937 3933.3495885486077 2954.48600224665 3925.723742878931 3355.250853744374 1.2228740218617786 1.0413094823487739 1.1158445095431706 1.1825720864445133 1.2038635879814028 1.205037514680609 1.179303815832798 1.1722967253429324 0.880555919969298 1.170023915945934 1.0 11.712204917532796 -8.752721400856824 24.99940609891039 0.9435958500454119 1.1632412327475803 0.2777150328370416 0.08697221150880542 71.57055826901306 205233.3106696337 0.010823149739543847 0.012180467482415162 1.7671710942869497e-09 8.752721400856824 0.21964538270216838 PLLPTRPPAS(ph)PPDK ddPTM_A549_PD325901_60min_R1 1 PLLPTRPPASPPDK 14 1 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 PLLPT(0.002)RPPAS(0.998)PPDK 63.827 0.0015145999999999998 3399800.0 2710.2 2693.0 2884.0 2334.0 3742.0 3045.1 2897.6 2528.9 3306.2 3075.2 3230.7 True False 2985.337508856211 2919.9485610843235 3079.7255829008445 2478.1658791014056 3479.174829199187 3020.3017151996883 3007.8697536275617 2478.459105616328 3167.251911620206 2881.0313471830846 2833.34438109466 1.0536444241567375 1.0305660619893315 1.0869577321592638 0.8746433704412481 1.2279392693714877 1.065984684160701 1.0615969501262934 0.8747468617488628 1.1178492571370873 1.0168306282874096 1.0 11.46829025055106 -6.7189082035417025 24.99997075202275 1.0541242258617238 1.0182117994033344 0.03934895991071541 0.0942490272812299 502.139304828471 295156.8647767746 0.013293803033030014 0.027673060191355608 1.910256985304661e-07 6.7189082035417025 -0.035912426458389435 PLLS(ph)PEER ddPTM_A549_MK2206_60min_R1 2 PLLSPEER 8 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 PLLS(1)PEER;PLLS(1)PEER 63.216 0.009996099999999999 2721800.0 1539.47 1052.29 980.0 1007.22 1719.8 1587.08 1065.15 1307.65 1848.08 1622.9 1624.77 True False 1799.294899572122 1105.8470663060073 1118.9787361495603 1253.9889452158236 1466.8196982052832 1755.0237521815595 1258.673967475078 1493.0133920101703 1429.4928307773298 1256.2857628469985 1221.2947676292356 1.473268327403788 0.9054710587622231 0.9162233113646346 1.0267700955192445 1.2010365859936156 1.437018972568263 1.0306062064921497 1.2224840649308537 1.17047322944996 1.028650737025335 1.0 10.254195731075152 -4.376637069567554 16.344007966992624 1.1095119170002614 1.1213283941519552 0.0 0.18464516779187445 0.0 0.0 0.023288994800579377 0.0 4.2010991403654266e-05 4.376637069567554 0.01181647715169376 PLLSQEDS(ph)EEEENELEAINRK ddPTM_A549_MK2206_60min_R1 1 PLLSQEDSEEEENELEAINRK 21 1 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 PLLSQEDS(1)EEEENELEAINRK 96.052 4.7813e-07 10680000.0 1739.9 1707.8 2118.2 1410.4 2301.7 1953.9 2158.5 1767.2 3038.6 2326.9 2595.9 True False 2033.5525835290957 1794.7197253964218 2418.592611134693 1755.9480633152627 1963.1229790435525 2160.6604011061504 2550.6715099234434 2017.7060118230202 2350.361951647113 1801.2516738977654 1951.2663868047368 1.0421706627453904 0.9197717633702155 1.239498936429289 0.8999017638953366 1.006076357548613 1.1073118543513185 1.3071877459541812 1.0340494898428914 1.204531563471407 0.9231193065583293 1.0 10.930195032720574 -7.27094836702501 20.08800989820923 1.1118428011360333 1.0211906188595226 0.07267122787786462 0.12586878104139973 81.51410693739993 172202.74402151405 0.017923737021819375 0.028981252516497868 5.358603617996225e-08 7.27094836702501 -0.09065218227651073 PLLSQEDS(ph)EEEENELEAINRK ddPTM_A549_PD325901_60min_R1 2 PLLSQEDSEEEENELEAINRK 21 1 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 PLLSQEDS(1)EEEENELEAINRK;PLLS(0.001)QEDS(0.999)EEEENELEAINRK 103.85 4.1694999999999994e-10 34561000.0 5545.1 5035.0 5685.5 5569.8 6934.5 5626.200000000001 5453.7 5775.3 5898.1 6054.4 6500.1 True False 6108.034469913133 5459.317120334039 6071.352219688886 5913.833896066408 6447.444642726289 5580.382092560663 5661.243537879153 5660.1071108648 5650.223368195251 5672.124150749631 5700.628907528833 1.0714667748055373 0.9576692692842902 1.0650320022884558 1.037400257409493 1.131005849935458 0.9789063949050675 0.993091048323166 0.992891697158095 0.9911578985141426 0.9949997171818085 1.0 12.476905374417044 PLPS(ph)PGAAGAQALEK ddPTM_A549_MK2206_60min_R1 1 PLPSPGAAGAQALEK 15 0 H9KVB4;O15417;O15417-2;O15417-3 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 PLPS(1)PGAAGAQALEK 87.647 3.8991e-05 1918300.0 1956.8 1937.3 1790.5 1975.2 2214.0 1925.2 2398.3 2178.4 3899.2 2868.7 2776.5 True False 2287.0600008332262 2035.9002951226662 2044.419823546722 2459.124088670099 1888.323532868065 2128.923386155667 2834.040065901967 2487.1948710702054 3016.0374257429135 2220.658677601323 2087.0184224983045 1.09585041328742 0.9755066237918272 0.9795887767485114 1.1782953433282866 0.9047948559110522 1.0200788661976443 1.357937254099284 1.191745527618708 1.445141735803419 1.0640340562701127 1.0 11.027227620152475 -7.733547083818098 24.289167210576526 1.2239396537354403 1.0227512401440453 0.32877113756978704 0.13183817012692833 175.2334920802671 152596.18356993495 0.026211691357534244 0.03887268731528222 1.846940548923172e-08 7.733547083818098 -0.20118841359139505 PLPS(ph)PGAAGAQALEK ddPTM_A549_PD325901_60min_R1 2 PLPSPGAAGAQALEK 15 0 H9KVB4;O15417;O15417-2;O15417-3 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 PLPS(1)PGAAGAQALEK;PLPS(1)PGAAGAQALEK 115.82 9.8914e-07 7642200.0 5996.200000000001 5698.1 4947.4 5608.1 7663.6 5303.6 5792.5 6619.299999999999 6931.4 6349.799999999999 7828.9 True False 6604.9298098308645 6178.298884483691 5283.160315133025 5954.499600080802 7125.335173984741 5260.409240002977 6012.936757277626 6487.272868759605 6640.0973625927945 5948.872544336353 6865.9949314860505 0.9619770879151113 0.8998402920676906 0.7694675524599546 0.8672449746175436 1.0377716915154436 0.766153964938106 0.8757560728312698 0.9448409055780536 0.9670990772426388 0.8664254203066825 1.0 12.745253076952503 -8.515199246258017 2.3935409389101983 0.9851007214856957 0.8801280862984193 0.06111796940848957 0.08095601088430948 0.2712641250578936 3.092738319684075 0.012529019495027443 0.014746579464228107 3.053519893487571e-09 8.515199246258017 -0.1049726351872764 PLPS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 PLPSPPK 7 0 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 PLPS(1)PPK;PLPS(1)PPK 72.547 0.01968 23012000.0 9668.1 10451.1 11728.0 10091.400000000001 16372.5 12730.3 11476.2 12833.5 18464.5 16581.9 15400.6 True False 11299.838917649084 10983.016349742673 13391.206752614318 12563.79345302016 13964.126938519603 14077.411896310776 13561.27698966107 14652.687925945409 14282.320231747557 12836.037273370292 11576.205985062998 0.9761262828451295 0.9487578541634687 1.1567871865698702 1.0853118430366102 1.2062783744983274 1.2160643922952936 1.1714785489442265 1.2657590876364895 1.2337652120372005 1.1088293772530378 1.0 13.498874877833119 -5.761022612420602 24.999943758999734 1.1409617444755031 0.9624420120766985 0.5045558165141004 0.07363879358328883 9.324792616612338 559145.8495850561 0.013997997090027615 0.04833767539707192 1.7337137260923213e-06 5.761022612420602 -0.1785197323988046 PLPS(ph)PPK ddPTM_A549_PD325901_60min_R1 4 PLPSPPK 7 0 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK 71.223 0.020675 38446800.0 16133.699999999999 14626.2 15537.6 14756.6 19529.7 14927.5 16062.699999999999 15283.099999999999 17297.8 16292.4 17549.6 True False 17771.58134699781 15858.801204653357 16592.074971178976 15668.081667329821 18158.00124580743 14805.935389196848 16673.974838346694 14978.266581139982 16570.833620719863 15263.695083521625 15391.11045608038 1.154665311363353 1.0303870698548727 1.078029750908853 1.0179955313841582 1.1797720052508602 0.961979672061131 1.0833509957534941 0.9731764724762079 1.076649645781304 0.9917214957996472 1.0 13.909809704242578 -7.280946180894544 24.98582186859889 1.031077973204606 1.0838312039375797 0.28156239955627105 0.05791652437037204 1072.4575409012316 1373683.0380515591 0.008172417232257199 0.01307785880300268 5.236653267798876e-08 7.280946180894544 0.052753230732973666 PLPTFPT(ph)SECTSDVEPDTR ddPTM_A549_MK2206_60min_R1 1 PLPTFPTSECTSDVEPDTR 19 0 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 PLPT(0.008)FPT(0.426)S(0.426)ECT(0.07)S(0.07)DVEPDTR 66.673 0.0018655000000000002 2100800.0 842.84 1245.2 984.39 815.58 1439.0 875.51 838.41 981.87 1193.6 1466.8 1441.1 True False 985.0907865404118 1308.5753613207776 1123.9913041614946 1015.3971366127772 1227.3250062317736 968.1558870834972 990.7382444451765 1121.0530793507642 923.2515057875314 1135.4488612631571 1083.2350976633559 0.9093970354776623 1.2080252607614936 1.037624525447942 0.9373746648378438 1.133018131409547 0.8937634029509423 0.9146105462999637 1.0349120719675584 0.8523094458248955 1.0482016911309755 1.0 10.081130673891245 -7.276098652864967 24.905143743386365 0.9337698058008673 1.0477412984432244 0.14921676860903754 0.09567920201042955 794.7654480525104 1350252.355269413 0.013659891170234237 0.021893204645106003 5.295431410003064e-08 7.276098652864967 0.11397149264235706 PLPTFPTSECT(ph)SDVEPDTR ddPTM_A549_PD325901_60min_R1 1 PLPTFPTSECTSDVEPDTR 19 0 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 PLPTFPT(0.001)S(0.006)ECT(0.497)S(0.497)DVEPDTR 130.21 1.8291e-16 3420400.0 1600.9 1861.5 2124.7 1779.6 2338.1 1379.5 1860.8 2195.5 1782.1 2868.9 2387.0 True False 1763.422189479708 2018.375137934818 2268.894918859024 1889.521850235159 2173.8799220071137 1368.2658093717678 1931.6137622688314 2151.7090301635694 1707.2045344196865 2687.7571643904644 2093.4141324397056 0.842366621182872 0.9641547301405501 1.0838251656468993 0.9026029876052635 1.0384375878238825 0.6536049356737476 0.9227098128059789 1.0278468062389192 0.8155120900182694 1.2839108720729329 1.0 11.031642027558052 PLPTLEVKPPDRPS(ph)SK ddPTM_A549_PD325901_60min_R1 3 PLPTLEVKPPDRPSSK 16 2 Q12872-2;Q12872;H0YFR9 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 PLPTLEVKPPDRPS(0.555)S(0.445)K;PLPTLEVKPPDRPS(0.53)S(0.469)K;PLPTLEVKPPDRPS(0.602)S(0.398)K 112.56 6.0379e-08 39663000.0 8125.799999999999 7381.7 10315.900000000001 7676.799999999999 11087.099999999999 8809.0 9636.1 9813.8 9827.2 10298.3 9887.2 True False 8950.725234102209 8003.781765078403 11015.999008546061 8150.978500722224 10308.38034441857 8737.262424614637 10002.807058576243 9618.05606022283 9414.19695900856 9648.06358048112 8671.137080124783 1.0322435398488017 0.9230371623836932 1.2704215037490256 0.940012644870438 1.1888152902168427 1.0076259138656014 1.1535750116906578 1.109203553276593 1.0856934761862953 1.1126641744132453 1.0 13.082005476758846 -10.600120287616305 0.9490922922065606 1.0013371313025932 1.079704051195601 0.0 0.10353201090995068 1.0746021445334386 1.7698632952687494 0.05479659290062968 0.016056117075818877 2.5111908044540426e-11 10.600120287616305 0.07836691989300792 PLPTLEVKPPDRPSS(ph)K ddPTM_A549_MK2206_60min_R1 1 PLPTLEVKPPDRPSSK 16 2 Q12872-2;Q12872;H0YFR9 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 PLPTLEVKPPDRPS(0.433)S(0.567)K 94.85600000000001 1.3082e-06 8588100.0 1908.2 2291.2 2169.2 1707.8 3560.9 2303.8 2332.2 2281.2 2858.9 2919.4 2651.9 True False 2230.257508989147 2407.812293493549 2476.8251780159444 2126.2110766660553 3037.0963270957072 2547.586586861328 2755.9305515142264 2604.567085882004 2211.363714725178 2259.905512388642 1993.3600412833616 1.1188432911263066 1.2079164042755446 1.242537788818782 1.066646783637321 1.5236065056969683 1.2780363477242904 1.3825553309174934 1.3066214993479732 1.1093649260178113 1.1337166721440215 1.0 10.960986598382167 -8.972155330723927 2.56068448427374 1.0421611615420217 1.2691369306187432 0.30871182127717534 0.12067767514680083 0.1895147044706878 2.471455672816335 0.022523147612646018 0.022862911605076534 1.0662147083175608e-09 8.972155330723927 0.22697576907672157 PLS(ph)ADLTK ddPTM_A549_MK2206_60min_R1 2 PLSADLTK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 PLS(1)ADLTK;PLS(1)ADLTK 114.5 0.0013253 5394200.0 2611.8 2780.0 2463.3 2318.9 3693.1 2788.2 2885.8999999999996 2700.3 3871.5 3689.1 3932.7 True False 3052.60798762072 2921.4901256599446 2812.6329803645026 2887.030604099376 3149.8498822199867 3083.245473342632 3410.230674305334 3083.0757943219223 2994.611431515103 2855.7297478087785 2956.1020530016517 1.0326463474158734 0.9882913625033474 0.9514668066038284 0.9766342813394618 1.0655416578130656 1.0430104976287533 1.1536241351487024 1.0429530980472546 1.0130270801964867 0.9660457239319751 1.0 11.52948036091812 -4.881238395452732 17.76346778735362 1.0174730426843668 2.9865421489684234 0.0024049152904866977 0.053931899500584475 1368.368857741643 201305.0029979545 0.007314103496096111 1798.4668907448108 1.314503069443628e-05 4.881238395452732 1.9690691062840566 PLS(ph)ADLTK ddPTM_A549_PD325901_60min_R1 2 PLSADLTK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 PLS(0.999)ADLT(0.001)K;PLS(1)ADLTK 103.26 0.0021541 9637900.0 3946.0 3726.2999999999997 4354.7 3747.9 5069.4 4227.4 4060.3 4166.9 4351.0 4433.4 4251.7 True False 4346.595015108333 4040.3283784509886 4650.23612893839 3979.399270901524 4713.3428324805855 4192.973455990004 4214.816938381414 4083.787910630186 4168.142601010075 4153.474367391224 3728.7678537469205 1.1656920424103576 1.0835558921671649 1.247124066537292 1.067215613034947 1.2640483444804151 1.1244930283811094 1.1303511250093186 1.0952110913868014 1.1178337629202741 1.1138999611406566 1.0 11.864483265020223 -10.422654676710296 0.3464396094848667 0.9576359547237812 1.1628618041621661 0.16609814010349 0.06606275678452436 1.4532324717152412 0.25833512044821827 0.1133097049939015 0.02161704640167207 3.778725316549401e-11 10.422654676710296 0.20522584943838496 PLS(ph)PGALQLAGEK ddPTM_A549_MK2206_60min_R1 1 PLSPGALQLAGEK 13 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 PLS(1)PGALQLAGEK 73.46600000000001 0.0012217 970070.0 858.83 1114.8 967.15 938.27 2055.8 945.44 840.19 1207.1 1530.4 1450.0 1368.6 True False 1003.779507622445 1171.5385583042098 1104.3064129255577 1168.1461921205407 1753.3945433017936 1045.48583326772 992.8416474044834 1378.21012158871 1183.7668435466137 1122.4439929312637 1028.738848561563 0.9757379232114959 1.1388104570390405 1.0734565088794472 1.1355128599973692 1.7044117131898757 1.016279140939971 0.9651056230575205 1.3397084435139164 1.1506971329038649 1.0910873974485598 1.0 10.006661076706676 -10.310802671159918 0.7779347075225339 1.0023808774777998 1.172109577713429 0.04454633533429897 0.19937549031581545 1.2519524790840484 1.4227259731836426 0.11717031654131367 0.03918685114727075 4.888744370269814e-11 10.310802671159918 0.16972870023562914 PLS(ph)PGALQLAGEK ddPTM_A549_PD325901_60min_R1 2 PLSPGALQLAGEK 13 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 PLS(1)PGALQLAGEK;PLS(1)PGALQLAGEK 88.28200000000001 0.00019148 4486800.0 3988.8 3615.7 4102.4 3952.5 5411.700000000001 4196.9 4123.9 4869.6 4838.9 4764.7 5204.200000000001 True False 4393.7400396006415 3920.4077283002543 4380.813533735236 4196.63694822121 5031.600861351485 4162.721837877759 4280.83727118467 4772.472007872704 4635.53786072803 4463.856028851213 4564.116392141903 0.9626704628228586 0.858963135789015 0.9598382594444214 0.9194850848778996 1.1024260621430373 0.9120542686082174 0.9379334143526754 1.0456508112040108 1.0156484766052625 0.9780329083054696 1.0 12.156119867748982 PLS(ph)PKPSSPGSVLAR ddPTM_A549_PD325901_60min_R1 1 PLSPKPSSPGSVLAR 15 1 F8VWK5;F8VUY0;F8VVS9;Q15583-4;Q15583-2;Q15583-3;Q15583 F8VWK5 TGIF1 Homeobox protein TGIF1 1 PLS(0.995)PKPS(0.004)S(0.001)PGSVLAR 67.449 0.00072787 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 PLT(ph)SPESLSR ddPTM_A549_PD325901_60min_R1 1 PLTSPESLSR 10 0 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 PLT(0.499)S(0.499)PES(0.002)LSR 117.25 7.932100000000001e-05 7665000.0 2265.8 2026.2 2303.7 2094.7 2393.2 2383.5 1729.2 2103.1 2168.5 2067.6 2231.8 True False 2495.822348006199 2196.9549849495193 2460.0429352734673 2224.084861591136 2225.109888091794 2364.089566246907 1795.005652254547 2061.1520206499677 2077.365486161882 1937.051383141177 1957.302748545846 1.2751335223232274 1.1224400448942913 1.2568535639676213 1.136300893279536 1.136824586663924 1.2078303001430302 0.917081250505638 1.0530573372878953 1.061340913001443 0.9896534322961971 1.0 10.934651208764098 -7.741258198246671 24.997166659114082 1.0242638473719528 1.1844803901607135 0.7063188965409319 0.05871422677065796 109.72230224660105 135905.8886471261 0.0084842501736792 0.012575291150962807 1.8144366169579418e-08 7.741258198246671 0.16021654278876074 PLTS(ph)PESLSR ddPTM_A549_MK2206_60min_R1 2 PLTSPESLSR 10 0 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 PLT(0.025)S(0.974)PES(0.002)LSR;PLT(0.134)S(0.865)PES(0.001)LSR 113.44 3.2546e-09 3357500.0 3203.8 3084.9 3219.6 3010.7 4596.1 3575.9 3343.5 3421.9 5163.4 4434.1 5097.8 True False 3744.5231146103315 3241.90823332675 3676.1876927623684 3748.3216351554593 3920.019778416854 3954.2993645096863 3950.970671034995 3906.9648041292403 3993.8981442554805 3432.433730383805 3831.8755678774933 0.977203734380251 0.8460369278437894 0.9593703207848783 0.9781950297597176 1.0230028895714336 1.0319487922985986 1.0310801071297495 1.0195959484909212 1.0422828386537961 0.8957581397365306 1.0 11.903834998001116 -6.315952125523503 1.9470047391622267 1.0221528008665828 0.9122534531115271 0.3000585631826156 0.049449805367770286 0.14457804730119156 1.0493625160792923 0.00434324669803684 0.013751842599761182 4.831120549889438e-07 6.315952125523503 -0.10989934775505572 PLTS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 PLTSPLR 7 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 PLT(0.032)S(0.968)PLR 80.684 0.015757 30959000.0 2241.9 1907.0 2326.4 1584.4 3250.1 2083.3 2671.0 2484.4 2817.5 2742.9 3432.1 True False 2620.2779108074474 2004.058154544428 2656.3185018146296 1972.5780711264185 2772.0145953814354 2303.7534232173803 3156.286126015993 2836.571308155904 2179.3407486229635 2123.2769849732176 2579.8148488587904 1.0156844829258023 0.7768224744620511 1.029654706805677 0.7646200160445662 1.0745013723010652 0.8929917680861753 1.2234545155099836 1.09952514980317 0.8447663403391212 0.8230346398356737 1.0 11.333051813016672 -6.774907370195078 24.998149526635768 0.967176597818748 0.8976301137610924 0.08675044870248272 0.13507863062760606 580.0728202954624 1076682.48149526 0.01943949180009794 0.03688279699441443 1.679162125075977e-07 6.774907370195078 -0.06954648405765562 PLTS(ph)PLR ddPTM_A549_PD325901_60min_R1 4 PLTSPLR 7 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 PLT(0.045)S(0.955)PLR;PLT(0.003)S(0.997)PLR;PLT(0.004)S(0.996)PLR;PLT(0.007)S(0.993)PLR 102.41 0.01067 96691000.0 7044.6 6138.499999999999 6508.500000000001 5605.93 8644.3 5841.4400000000005 6680.4 6588.59 7608.9 7139.0 8010.9 True False 7759.7626060395805 6655.812938067626 6950.205948789927 5952.195564109226 8037.154189216067 5793.869249363263 6934.62627765515 6457.175403801131 7289.124393662505 6688.242321650636 7025.610085279107 1.1044966219088586 0.947364407827539 0.9892672471751349 0.847214048582197 1.143979539379287 0.8246784519828771 0.987049692977611 0.9190910576336954 1.0375076762280824 0.9519802893224371 1.0 12.778407795232647 -8.784149338815848 24.992217240193124 1.0177119591020993 0.9676325371448345 0.0008060715688957831 0.09214856108841421 490.801368203785 540122.3961995586 0.014131701758309351 0.01504946128607694 1.6438063779946333e-09 8.784149338815848 -0.05007942195726478 PLTYPQYS(ph)PPQPR ddPTM_A549_MK2206_60min_R1 1 PLTYPQYSPPQPR 13 0 P15407;E9PKL5;E9PPX2 P15407 FOSL1 Fos-related antigen 1 1 PLTYPQYS(1)PPQPR 122.1 7.9464e-06 7774100.0 5016.5 4990.8 3740.0 3693.2 5592.2 4120.5 4267.3 4657.6 6529.9 6571.2 7961.0 True False 5863.162558350312 5244.810402569657 4270.388237958525 4598.034165794046 4769.594787942545 4556.528575033465 5042.61317317411 5317.829063301779 5050.888076107577 5086.761356103393 5984.063987577529 0.9797961001957534 0.8764629545167787 0.7136267671641768 0.7683798460944307 0.7970494295923086 0.7614438255494057 0.8426736718795453 0.8886651403362658 0.8440564951499256 0.8500512973563001 1.0 12.546909886703682 -10.42954613352135 0.4957308049811653 1.0240011057813936 0.816084852716059 0.07584307362958531 0.0806740058031428 0.9181445533249586 0.35162046045331796 0.08936985872744246 0.018230839318713166 3.7192371096200706e-11 10.42954613352135 -0.20791625306533457 PLTYPQYS(ph)PPQPR ddPTM_A549_PD325901_60min_R1 2 PLTYPQYSPPQPR 13 0 P15407;E9PKL5;E9PPX2 P15407 FOSL1 Fos-related antigen 1 1 PLTYPQYS(1)PPQPR;PLTYPQYS(1)PPQPR 162.48 1.0153000000000001e-18 16705800.0 8756.7 7522.099999999999 8539.1 7650.700000000001 9803.4 7925.0 8313.1 9267.7 8453.6 10059.400000000001 11377.599999999999 True False 9645.673737658177 8156.013765812242 9118.614675779681 8123.266362999625 9114.84300389399 7860.461427525381 8629.459569602865 9082.848453130002 8098.324590185881 9424.247767252064 9978.227328548803 0.9666720771194345 0.8173810334503998 0.9138511656965687 0.8140991476269607 0.9134731755224121 0.7877613095700614 0.8648289205551606 0.9102667391775067 0.8115995280059101 0.9444811645339305 1.0 13.284567822522561 -10.920302628821192 1.1146039387949924 1.0018331879492508 0.8608630288152271 0.33544878287996427 0.055265473330399724 0.3294325882678455 0.7112419514737238 0.03675653801870655 0.008230871792363235 1.2014269541837684e-11 10.920302628821192 -0.14097015913402366 PLVGPLALGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 PLVGPLALGSPR 12 0 Q9UL51 Q9UL51 HCN2 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 1 PLVGPLALGS(1)PR 72.652 0.0018092 1935000.0 1474.6 1940.3 2078.9 1890.1 1998.3 2203.6 2212.9 2313.2 2350.8 2148.0 2310.4 True False 1624.3003064568547 2103.8158904834427 2219.9866554412506 2006.8471842714496 1857.946301760752 2185.654612201253 2297.1131204453454 2267.0614113297047 2252.004051127208 2012.3749134200266 2026.235446832298 0.801634533141839 1.0382879708142652 1.095621270919849 0.9904313871365941 0.9169449210186112 1.0786775128320756 1.1336851914403738 1.1188538897954334 1.1114226901162272 0.9931594655330207 1.0 10.984586108476083 -7.286722187099231 24.206951020742952 1.0677457813536602 0.9807278199498364 0.2849272984634934 0.08084234535270036 642.2027921829483 614873.8455889358 0.012599758704220388 0.020148028430027488 5.16746820227373e-08 7.286722187099231 -0.08701796140382378 PMDS(ph)RLEHVDFECLFT(ph)CLS(ph)VR ddPTM_A549_PD325901_60min_R1 1 PMDSRLEHVDFECLFTCLSVR 21 1 B4DDL8;P78524-3;P78524-2;P78524;E9PLH5 B4DDL8 ST5 Suppression of tumorigenicity 5 protein 3 PMDS(1)RLEHVDFECLFT(1)CLS(1)VR 46.306999999999995 0.0044678999999999995 10997000.0 635.22 472.21 677.9 1015.7 1279.6 1082.5 896.59 657.27 2245.9 578.35 891.85 True False 699.7070667757517 512.0047939211388 723.9063705438567 1078.4374821779334 1189.7253103803534 1073.6844789017316 930.7102230828735 644.1602342316595 2151.512633327632 541.8328822981714 782.1581039029543 0.8945852037896515 0.6546052407642962 0.9255243497850083 1.378797300439068 1.5210803345815207 1.3727205197313257 1.189925947757425 0.8235678068376611 2.7507387861758694 0.6927408660658702 1.0 9.611316450327523 -6.56964731631753 0.6193202386628124 1.733744200081392 0.6464291534662643 0.0 0.5851458189089842 1.3933657914931437 0.807801770866346 0.1334073511645507 0.8012324705313739 2.6937214445354366e-07 6.56964731631753 -1.0873150466151278 PMEEDGEEKS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 PMEEDGEEKSPSK 13 1 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.958)PS(0.042)K 105.06 2.9772e-05 51374000.0 11309.0 8902.5 11479.0 9690.6 11990.0 9531.0 10689.0 10965.0 10321.0 12602.0 11114.0 True False 12457.081354754217 9652.744918326469 12258.033968834536 10289.166353050583 11147.863763254485 9453.38269599298 11095.775744245231 10746.294473123911 9887.244262244314 11806.307569329221 9747.048457450723 1.2780362598107249 0.9903249132764732 1.2576149613234349 1.0556186724592982 1.143716871001392 0.969871314096806 1.138372892335785 1.1025178052653835 1.0143834110813745 1.2112700189055061 1.0 13.250749701426763 -2.0000000000000018 0.14582121394750072 0.9681999323985223 1.763040403127164 0.0 0.10662275884423981 50.19527796587988 0.4607893522075328 0.14766840702197315 8.457762919883193 0.009999999999999959 2.0000000000000018 0.7948404707286417 PMEEDGEEKS(ph)PSKK ddPTM_A549_PD325901_60min_R1 4 PMEEDGEEKSPSKK 14 2 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.755)PS(0.245)KK;PMEEDGEEKS(0.944)PS(0.056)KK;PMEEDGEEKS(0.962)PS(0.038)KK;PMEEDGEEKS(0.613)PS(0.387)KK 91.475 1.3345999999999999e-05 103499000.0 11675.0 10406.4 12876.0 12087.599999999999 16319.3 12731.2 12631.0 13026.5 12514.8 13995.100000000002 14383.199999999999 True False 12860.237405319258 11283.383849263973 13749.842789677976 12834.223599068613 15173.088666528673 12627.521328215904 13111.679616948415 12766.676238408434 11988.84647738931 13111.446997581294 12614.157582616994 1.0195082248727712 0.8945015769275865 1.0900325843896241 1.0174459542787766 1.202861829428707 1.0010594243421636 1.0394415585085948 1.0120910694822474 0.9504278346665498 1.039423117374845 1.0 13.622756240880499 -8.535564960412616 4.612146134156547 0.9765977599389217 1.0379334936146243 0.04139550105721568 0.07250111091864919 0.3008223456315386 16.432473243148706 0.011896831712582183 0.013810563922266868 2.9136342898555493e-09 8.535564960412616 0.06133573367570255 PMEEDGEEKSPS(ph)KK ddPTM_A549_PD325901_60min_R1 2 PMEEDGEEKSPSKK 14 2 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.272)PS(0.728)KK;PMEEDGEEKS(0.377)PS(0.623)KK 112.74 1.3272e-06 92019000.0 11016.199999999999 9427.7 12574.900000000001 11520.5 15071.2 12153.7 11820.400000000001 12420.4 12513.8 12228.5 12537.5 True False 12134.556514302178 10222.205365516029 13428.308333016592 12232.09512004615 14012.650904817428 12054.724296746399 12270.231790371066 12172.665378384692 11987.88850391172 11456.390423071136 10995.466981760703 1.103596285126498 0.9296745088201018 1.221258574582734 1.112467086694614 1.2744025267923258 1.0963358188190455 1.1159354860257364 1.1070621555752682 1.090257332753329 1.0419194057037335 1.0 13.42462125686318 -9.959415830337589 0.6337214869485602 1.0021175818761638 1.1223934533522646 0.1740656069627483 0.0813232996844161 0.8248466071142692 0.6653766167773842 0.04683812331710406 0.018512036852057635 1.0979540617267922e-10 9.959415830337589 0.12027587147610075 PMSISPPDFS(ph)PK ddPTM_A549_MK2206_60min_R1 3 PMSISPPDFSPK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 PMSISPPDFS(1)PK;PMSIS(0.01)PPDFS(0.99)PK;PMSISPPDFS(1)PK 70.089 0.0011562999999999999 4820100.0 5177.7 5696.599999999999 5663.1 6228.9 6997.4 5943.0 6032.7 5347.6 8038.6 8222.1 8764.099999999999 True False 6051.569177388697 5986.532607854116 6466.212735396505 7754.980779625949 5968.091729399729 6571.884315355875 7128.763501466365 6105.638676338156 6217.869935006408 6364.72189950355 6587.732093145111 0.9186119125405358 0.9087395363395886 0.9815536885789491 1.177185208805838 0.9059402606262402 0.997594349987953 1.0821271115266247 0.9268195169459609 0.9438559199267431 0.9661476528662094 1.0 12.68556617006181 -5.781194486723788 7.5441689509643 0.9882766220396915 0.9135050741990431 0.157218846351465 0.07250149920695789 0.21547568627670394 56.35122186793014 0.00975963126836169 0.032100401220211246 1.655028638873706e-06 5.781194486723788 -0.07477154784064832 PMSISPPDFS(ph)PK ddPTM_A549_PD325901_60min_R1 1 PMSISPPDFSPK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 PMS(0.002)IS(0.081)PPDFS(0.917)PK 70.089 0.0011562999999999999 2983200.0 3527.2 2954.0 3713.9 3622.9 4939.8 4496.3 3763.5 3818.3 5141.8 3680.1 3292.7 True False 3885.278747412597 3202.9439470639018 3965.947587494954 3846.6783047971207 4592.84548938486 4459.683623543514 3906.7220519662205 3742.141011101598 4925.708027091154 3447.7378579502033 2887.7187741450443 1.3454491421391601 1.1091606203973878 1.3733842862413557 1.332082036255761 1.5904753366243727 1.5443621669370748 1.3528748321840545 1.2958813872758503 1.70574367254633 1.1939313096618842 1.0 11.495714534192668 -4.031853559675435 12.418648140293756 1.3548914146418471 1.3532044179722449 0.0 0.19798384058421678 0.0 0.0 0.03419566400557817 0.0 9.292796789880508e-05 4.031853559675435 -0.0016869966696022587 PMVSLLGSGRPTGSPLS(ph)AEFSGTR ddPTM_A549_MK2206_60min_R1 1 PMVSLLGSGRPTGSPLSAEFSGTR 24 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 PMVSLLGS(0.001)GRPT(0.03)GS(0.394)PLS(0.481)AEFS(0.043)GT(0.051)R 56.021 0.0010454000000000001 2873000.0 1303.7 1387.7 1623.2 1424.9 2166.2 1575.5 1610.2 1963.3 2076.5 2206.7 2027.9 True False 1523.7326875951946 1458.3280026540667 1853.3941678754743 1774.0005639661913 1847.5548495477888 1742.2183642677405 1902.752497233602 2241.603787354083 1606.176065489116 1708.2049373802909 1524.3164628072445 0.999617024924749 0.9567094748608496 1.2158854234652734 1.1638006983793365 1.212054645231119 1.1429505662224488 1.248266054759662 1.470563260352022 1.0537024985816366 1.1206366781832098 1.0 10.57394673600139 -8.975325355495034 24.99953367124359 1.0236920920109869 1.1779210521179233 0.13030518615653575 0.12979110924527038 191.17419821067804 193693.40869364064 0.02325798684530846 0.02410324374220477 1.058460473192936e-09 8.975325355495034 0.15422896010693643 PMVSLLGSGRPTGSPLS(ph)AEFSGTR ddPTM_A549_PD325901_60min_R1 1 PMVSLLGSGRPTGSPLSAEFSGTR 24 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 PMVSLLGS(0.002)GRPT(0.007)GS(0.381)PLS(0.603)AEFS(0.003)GT(0.004)R 73.107 1.2434000000000002e-05 5217500.0 3174.7 3148.9 3630.9 3477.7 3493.5 3586.5 3373.3 3859.0 3837.4 4303.5 4102.7 True False 3496.993206909384 3414.2688540655104 3877.3147083754084 3692.5096305702455 3248.1286119207275 3557.292733100285 3501.672777440588 3782.0292176730663 3676.127422917964 4031.7762755600934 3598.0939091580994 0.9719015943437753 0.948910434320598 1.0776024212449316 1.0262404828211495 0.9027359190524133 0.9886603359756775 0.9732021636589044 1.051120207854165 1.0216874588962919 1.120531141585315 1.0 11.813017125645214 -8.21038105862372 24.996960215329445 1.013593435161698 0.9850734465459772 0.15086179833831714 0.05373765307017715 705.924660100749 345604.3754017517 0.0070148848640918995 0.009056156968589085 6.160542264108468e-09 8.21038105862372 -0.028519988615720804 PNNSGEAPSS(ph)PTPK ddPTM_A549_MK2206_60min_R1 1 PNNSGEAPSSPTPK 14 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 PNNSGEAPS(0.022)S(0.967)PT(0.011)PK 135.02 5.3003e-09 6175700.0 2218.4 1960.4 1980.2 1790.1 2368.7 2200.6 2236.9 2114.0 2803.0 3439.2 2588.3 True False 2592.811685327286 2060.1759864545884 2261.0221360442433 2228.674580360643 2020.2673677979153 2433.4660313599434 2643.3157750974065 2413.665973853477 2168.124975471223 2662.2823313718636 1945.5536765540664 1.3326857627077309 1.0589150077337055 1.1621484224732004 1.1455220214268445 1.0384022770197636 1.250783291504997 1.3586444861183193 1.2406062104277296 1.1143999785764696 1.3683931538127776 1.0 10.925965068534978 -9.494808022002973 1.2288029337011415 1.0267948867512984 1.1894224192486569 0.0 0.14114289658776674 0.3414427740452106 1.065098183283139 0.025600673123217496 0.01966695237816384 3.20030948002177e-10 9.494808022002973 0.1626275324973585 PPYTVVYFPVR ddPTM_A549_MK2206_60min_R1 1 PPYTVVYFPVR 11 0 P09211;A8MX94;A0A2R8Y5E5 P09211 GSTP1 Glutathione S-transferase P 0 80.23899999999999 0.0024714000000000003 1457800.0 1190.2 1404.5 1648.7 1145.6 2040.4 1181.3 1574.5 1521.8 2278.8 1691.1 1841.4 False True 1391.0766624037756 1475.9830508954635 1882.5104513161025 1426.2720514279388 1740.2598629015363 1306.3043819165239 1860.566269341886 1737.5198103170399 1762.6554384958342 1309.0793354800414 1384.1295599453906 1.0050191128485537 1.0663619169824659 1.3600680931851314 1.0304469268644265 1.2572954969404717 0.9437731984916663 1.344213954519758 1.2553158754774314 1.2734757565363881 0.9457780350646436 1.0 10.434763275861023 -5.534766614795429 24.89688710272212 1.1573125755838456 1.020354669937912 0.09620883972188332 0.14788210516339345 305.0972890347822 638969.6876871126 0.019687025710112747 0.0763568218979952 2.918995229374849e-06 5.534766614795429 -0.13695790564593358 PPYTVVYFPVR ddPTM_A549_PD325901_60min_R1 2 PPYTVVYFPVR 11 0 P09211;A8MX94;A0A2R8Y5E5 P09211 GSTP1 Glutathione S-transferase P 0 ; 89.04700000000001 0.0008392999999999999 6708800.0 4655.200000000001 4721.8 4583.9 4780.1 5292.8 5406.4 5391.0 4951.4 6121.6 5458.3 5417.0 False True 5127.792477022888 5119.722657158544 4894.99101922995 5075.355920605239 4921.0519871687475 5362.37207088621 5596.157455068393 4852.640442701844 5864.330440437436 5113.662006480692 4750.743341192246 1.0793663451698947 1.0776677015504061 1.0303631805968083 1.0683287974322622 1.0358488416959526 1.1287437956057778 1.177954070165361 1.0214486648070586 1.2344027069594807 1.0763919747340778 1.0 12.213937551947328 -7.265724853976252 23.91398014283784 1.1125643969673351 1.0583935714789208 0.12222334936147294 0.06315021654166468 424.3907557037361 2368205.888081269 0.013022857423820642 0.021254433406714377 5.4234438230931445e-08 7.265724853976252 -0.05417082548841434 PQPAPADGADPPPAEEPEARPDGEGS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 PQPAPADGADPPPAEEPEARPDGEGSPGK 29 1 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 PQPAPADGADPPPAEEPEARPDGEGS(1)PGK;PQPAPADGADPPPAEEPEARPDGEGS(1)PGK 94.18799999999999 4.713e-10 13210000.0 2135.6000000000004 1991.31 1915.5500000000002 1916.88 3612.7 2816.8 1994.29 2393.9 2977.3 3264.0 3012.8 True False 2496.037069592929 2092.6591734273034 2187.203793909479 2386.5156860520133 3081.2766157147516 3114.8719063594863 2356.6266784921113 2733.2426560112785 2302.9463037711275 2526.660133053548 2264.638610950078 1.1021789779278615 0.9240587718096775 0.9658069871871905 1.053817449951012 1.3606041161781974 1.3754388410134506 1.040619314312336 1.206922218315711 1.0169155876067035 1.1157012517743592 1.0 11.14506512928761 -3.980205451948096 15.998717264997696 1.0635307103746399 1.0835578739319667 0.0 0.14958932174103903 0.0 0.0 0.021073412372263563 0.0 0.00010466332994807163 3.980205451948096 0.02002716355732681 PQS(ph)PS(ph)IPSS(ph)HLR ddPTM_A549_MK2206_60min_R1 2 PQSPSIPSSHLR 12 0 H3BN21;Q9P2P6 H3BN21 STARD9 StAR-related lipid transfer protein 9 3 PQS(0.999)PS(0.999)IPS(0.032)S(0.97)HLR;PQS(0.999)PS(0.999)IPS(0.012)S(0.989)HLR 51.695 0.009356100000000001 74661000.0 1116.1599999999999 1536.52 982.34 1956.6799999999998 1266.76 773.37 696.28 680.08 1635.65 1626.4 2196.02 True False 1304.5405205079799 1614.722304992453 1121.6505833358758 2436.0666878387015 1080.4212820668245 855.2075000785421 822.7850632056965 776.483422657651 1265.1778865963274 1258.9951104161432 1650.6876269312907 0.7903012654993875 0.978211915233351 0.6795050529463769 1.4757890276111592 0.6545280066558569 0.5180916644225503 0.498449888265834 0.47039997755430674 0.7664550614875301 0.7627094853534929 1.0 10.688851417805209 -4.891053534574962 12.072957681796032 0.8285811723128164 0.0001913105162760681 0.0 0.2804303323121691 90633173.84431818 189771732.4828936 0.03934347563827767 1953202344.235019 1.285128235102358e-05 4.891053534574962 -0.8283898617965403 PQS(ph)PS(ph)IPSS(ph)HLR ddPTM_A549_PD325901_60min_R1 2 PQSPSIPSSHLR 12 0 H3BN21;Q9P2P6 H3BN21 STARD9 StAR-related lipid transfer protein 9 3 PQS(1)PS(1)IPS(0.008)S(0.992)HLR;PQS(0.998)PS(0.998)IPS(0.023)S(0.981)HLR 55.18600000000001 0.0067351 54520000.0 1217.13 1373.9 1374.02 1281.15 1262.6 1425.69 1229.74 1234.8 1698.58 1337.1599999999999 1303.67 True False 1340.6921415962515 1489.683374702469 1467.2692598534736 1360.283725797242 1173.9193317335362 1414.0796533260136 1276.5384286395488 1210.1709453181388 1627.1945895710624 1252.7314893988462 1143.3268546450226 1.1726236781279018 1.3029374484210663 1.2833331552498413 1.189759271612298 1.0267574202112237 1.2368113698904182 1.116512240968822 1.0584645505364865 1.4232103295398146 1.0956897271408808 1.0 10.159022185297054 -11.193207362681596 1.6267055239413204 1.0001716455827176 1.2303821022345638 0.1651928314392045 0.1134568325547323 0.3867355781829758 1.8427669298749534 0.0937562531161951 0.01970213418790306 6.40903491187039e-12 11.193207362681596 0.23021045665184614 PQSPVIQAAAVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 PQSPVIQAAAVSPK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 PQSPVIQAAAVS(1)PK;PQSPVIQAAAVS(1)PK 128.9 1.1171e-08 5660900.0 3168.3999999999996 3305.1000000000004 3569.6 3423.2999999999997 5588.8 3125.1 3836.1 3487.3 6050.5 5721.6 6081.799999999999 True False 3703.148460057236 3473.3154727765022 4075.8229556729257 4262.008653677776 4766.694923438592 3455.796007726509 4533.069714717313 3981.635454408344 4680.071410663085 4429.086586176219 4571.521210859062 0.8100473101296964 0.7597723629775767 0.8915682040348695 0.9322955001398487 1.042693384450655 0.7559400576590805 0.9915889056687712 0.8709651056524641 1.0237448750201958 0.9688430572421914 1.0 12.158458598343527 -2.4829462510820886 0.20466185019658512 1.025580185476073 4.4614086502044077e-10 0.3280046235843127 0.08095962415049825 25.80492159430517 0.3450370900814526 0.05957582049021749 8.306167458389565 0.0032889233255160295 2.4829462510820886 -1.0255801850299322 PQSPVIQAAAVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 PQSPVIQAAAVSPK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 PQSPVIQAAAVS(1)PK;PQSPVIQAAAVS(1)PK 131.24 8.9278e-09 7499500.0 4959.9 4387.200000000001 4868.299999999999 4905.200000000001 6233.6 5403.2 5367.0 6734.299999999999 5757.7 6079.1 6590.3 True False 5463.4253967146005 4756.924740879743 5198.692113466085 5208.183063482526 5795.773440752553 5359.198130625253 5571.2441219350885 6599.979103543851 5515.723891941096 5695.264588534301 5779.734879353744 0.9452726657464761 0.8230351115017985 0.8994689586951041 0.9011110668911642 1.002774964896072 0.9272394396098125 0.9639272800966318 1.141917274980928 0.9543212633583344 0.9853850924683092 1.0 12.496787601434068 -6.687860333411364 4.823679918119521 0.9869070426044518 0.8855214518968065 0.4193405709460989 0.05829394949378621 0.16430471740998212 7.096910698746183 0.008267909050385443 0.01741104667573182 2.0518219267756278e-07 6.687860333411364 -0.1013855907076453 PQTS(ph)PSPK ddPTM_A549_MK2206_60min_R1 1 PQTSPSPK 8 0 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PQT(0.286)S(0.69)PS(0.024)PK 93.928 0.0025478000000000002 235980000.0 13225.0 10879.0 11872.0 9100.2 14883.0 12702.0 13837.0 14436.0 15812.0 17443.0 17708.0 True False 15457.056679793242 11432.694632034005 13555.628117926091 11329.749408523501 12693.730415390884 14046.117209094798 16351.003790970894 16482.347208395833 12230.60724657545 13502.614185310367 13310.61488406266 1.1612578993852947 0.858915589671431 1.01840735653443 0.8511815199528514 0.9536546978449211 1.0552568255815729 1.2284183663482455 1.2382859358458953 0.918861176069308 1.0144245253070612 1.0 13.70028959765861 -5.220122611550689 22.375402089446865 0.9921416784857333 1.1612596527353598 0.08341673574377029 0.12288782730585796 10703.231413963884 5795940.093747052 0.017699534951212115 7.006150572310935 6.023894933373981e-06 5.220122611550689 0.1691179742496265 PQTS(ph)PSPK ddPTM_A549_PD325901_60min_R1 2 PQTSPSPK 8 0 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PQT(0.34)S(0.562)PS(0.098)PK;PQT(0.113)S(0.835)PS(0.052)PK 91.75200000000001 0.0026023000000000005 607030000.0 21099.4 18821.2 21484.0 17454.9 24030.0 17560.5 16653.9 17275.5 22161.7 24103.0 22681.0 True False 23241.395555442665 20407.328577007134 22942.033433787015 18533.049530045882 22342.21569899959 17417.49311016521 17287.673277863767 16930.92660013242 21230.32081838773 22581.132466556286 19891.380786705042 1.1684153958269552 1.0259382591804256 1.1533655546487231 0.9317125708252975 1.123210899161542 0.8756301685103066 0.8691037320756769 0.8511689953393622 1.0673125735231817 1.1352219691882333 1.0 14.279855805796005 -6.255066573852738 24.96676107789667 0.9979146287597429 1.1069095883827538 0.25264913881655093 0.0996964023064747 639.9771826190688 2507233.2276492543 0.013510116135823263 0.03483075268285989 5.558190481478388e-07 6.255066573852738 0.10899495962301087 PQTS(ph)PSPKR ddPTM_A549_PD325901_60min_R1 2 PQTSPSPKR 9 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PQT(0.03)S(0.485)PS(0.485)PKR;PQT(0.128)S(0.436)PS(0.436)PKR 43.68 0.027277 214730000.0 5664.1 5332.8 7890.7 6088.5 7446.299999999999 6235.799999999999 6480.700000000001 6976.9 7184.200000000001 6825.9 6896.2 True False 6239.115262309967 5782.21377146323 8426.210352633738 6464.5728170132425 6923.2975763404365 6185.017712272897 6727.326584875115 6837.740256227829 6882.2730577284765 6394.911509084619 6048.011118613615 1.0315978492678697 0.9560521067277216 1.3932200499269713 1.0688758155747433 1.14472302390996 1.022653164978091 1.1123204724559468 1.130576667622801 1.1379398818476543 1.0573577633485773 1.0 12.56224507646214 -10.804180274948754 0.9659827940054457 0.9975294466427889 1.113761571655013 0.0725586096202806 0.10648674129785017 0.9394824153999727 1.5023629278353847 0.07770740703623634 0.01780967704581968 1.5697110845042037e-11 10.804180274948754 0.11623212501222424 PRAS(ph)PPPQGPLPGPPGALHR ddPTM_A549_MK2206_60min_R1 1 PRASPPPQGPLPGPPGALHR 20 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 PRAS(1)PPPQGPLPGPPGALHR 68.895 0.00047456 18305000.0 381.54 617.64 398.26 253.03 798.11 583.67 449.35 262.79 596.05 552.09 829.24 True False 445.9346242425949 649.0752378462619 454.7392565907383 315.0223613589486 680.7090762499242 645.4335719912102 530.9910785193879 300.0412872606222 461.045626696262 427.3724855568428 623.3168221402823 0.7154220909863939 1.0413247561930592 0.729547543782471 0.5053968546481012 1.0920755738832368 1.03548235674915 0.8518799102776088 0.4813624092967213 0.7396649830710009 0.6856424700513847 1.0 9.283821838655191 -10.838149050033836 1.1854276900470528 0.9958369867776684 0.7997463866262391 0.0 0.21269995674082118 0.8058994616916354 2.0757126845767004 0.12261971364641341 0.032869658417340006 1.4516133378298333e-11 10.838149050033836 -0.19609060015142932 PRAS(ph)PPPQGPLPGPPGALHR ddPTM_A549_PD325901_60min_R1 3 PRASPPPQGPLPGPPGALHR 20 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 PRAS(1)PPPQGPLPGPPGALHR;PRAS(1)PPPQGPLPGPPGALHR;PRAS(1)PPPQGPLPGPPGALHR 107.17 2.6475e-10 49950500.0 4642.0 4580.54 4234.7 5081.69 4968.44 5484.85 4719.38 5337.45 5834.42 6269.5 7540.7 True False 5113.252422740213 4966.558181206529 4522.092207319768 5395.574449944651 4619.473914587494 5440.183200096221 4898.978588443827 5230.990372601475 5589.219617142087 5873.642700040435 6613.241704435727 0.7731839620061943 0.7510020657305311 0.6837935780098051 0.8158743761513593 0.6985188385733815 0.8226197443301225 0.7407832357250628 0.7909873260934757 0.8451558051164539 0.8881639236171849 1.0 12.691141915620829 -9.759816171585284 0.4283420853333672 1.0193628792338028 0.739578352708874 0.6486609627774141 0.050887861003929225 0.2936912461395489 0.11276073463000787 0.03372945963634688 0.012898217118246395 1.738536561769948e-10 9.759816171585284 -0.2797845265249288 PRPS(ph)ITK ddPTM_A549_MK2206_60min_R1 2 PRPSITK 7 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 PRPS(0.97)IT(0.03)K;PRPS(0.989)IT(0.011)K 91.265 0.0034645 41956000.0 10639.2 8123.4 10743.1 7681.6 12389.3 9412.2 7952.5 7626.0 12531.2 11936.0 10043.3 True False 12434.83685653356 8536.846362153234 12266.633122784013 9563.592344840132 10566.850382006463 10408.192756687296 9397.366311172656 8707.008853645517 9692.90320821441 9239.649310087974 7549.271429021153 1.6471572089368993 1.13081725069993 1.6248764186207725 1.2668232205925807 1.3997179040860865 1.3787016210168024 1.2448044025873803 1.1533575041657333 1.2839521401962892 1.2239127175330609 1.0 12.882121703079015 -14.145043953164803 0.08974070174538105 6.590248265425987e-12 1.664929264946321 0.3485233269293986 0.15241838442033648 58.342368297485315 0.45627803420327306 12.064685826626128 1.3503342374864877 7.160709359405366e-15 14.145043953164803 1.6649292649397307 PRPS(ph)ITK ddPTM_A549_PD325901_60min_R1 2 PRPSITK 7 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 PRPS(0.974)IT(0.026)K;PRPS(0.966)IT(0.034)K 101.65 0.0030353999999999997 42366000.0 7927.4 6395.9 10184.5 8573.099999999999 12991.0 8503.8 10421.099999999999 10711.9 14480.6 16897.2 14034.8 True False 8732.183812156569 6934.904939413002 10875.681414373665 9102.640916077231 12078.556976517013 8434.547872225907 10817.680663144723 10498.242751177011 13872.030739642956 15830.3079083058 12308.608573927437 0.7094371195338369 0.5634190816744942 0.8835833351148193 0.7395345185774118 0.9813096991403457 0.6852559996173968 0.8788711248856468 0.852918726606904 1.1270185948578477 1.2861167704884338 1.0 13.587380061196857 -8.539643046306452 2.582815148166298 1.059681833194872 0.7755994650055489 0.573835836053856 0.13030446756163613 0.15134132479184675 2.0278251112396393 0.019757108175084293 0.02305840134116203 2.8864029099104633e-09 8.539643046306452 -0.2840823681893232 PRPS(ph)PARPK ddPTM_A549_MK2206_60min_R1 1 PRPSPARPK 9 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 PRPS(1)PARPK 43.083999999999996 0.014662 1663200.0 469.15 340.54 386.86 434.03 759.63 409.35 457.87 325.34 564.8 813.45 715.52 True False 548.3310503837433 357.8720314360568 441.7225651702233 540.3673694843473 647.8894332757765 452.6671452954613 541.0590522347215 371.45794131196357 436.87370180026596 629.6910800344392 537.8366366526157 1.0195122701131756 0.6653916952615547 0.821295045870087 1.0047053931607977 1.2046212346338225 0.8416443106456419 1.005991439337717 0.690651986119505 0.8122795511277882 1.1707850248980929 1.0 9.07102422262921 -6.158710679413518 10.427484139395904 0.9215363018179041 0.8179409674322564 0.06419545566975882 0.16459369248040046 1.0031124736804258 96.398860851495 0.020946486642445226 0.055499437817979495 6.938879099803864e-07 6.158710679413518 -0.10359533438564772 PRPS(ph)PARPK ddPTM_A549_PD325901_60min_R1 1 PRPSPARPK 9 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 PRPS(1)PARPK 44.765 0.011090000000000001 7475400.0 510.78 474.32 849.92 772.07 663.28 562.12 866.9 665.4 598.78 685.32 982.75 True False 562.6340095836379 514.292611026185 907.6006821841493 819.7590104018085 616.6935009917793 557.5422810902918 899.8903538858821 652.1280750037981 573.6153589135399 642.0487782425575 861.8779801655298 0.6528000744091176 0.5967116260789159 1.0530500872174946 0.9511311685261618 0.7155229802637942 0.6468923605441362 1.0441041244760096 0.7566361944628778 0.6655412623529063 0.7449416193684951 1.0 9.751339824900368 -11.024903035896067 1.322434853158834 0.9996916691221915 0.7800602036757995 0.0 0.17020086081930355 0.5740192993745374 1.7925450956864444 0.11185265414829326 0.0253690449436172 9.44271678496142e-12 11.024903035896067 -0.219631465446392 PRPS(ph)PSSTR ddPTM_A549_PD325901_60min_R1 1 PRPSPSSTR 9 1 M0QZR4;M0QYC1;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 PRPS(0.748)PS(0.195)S(0.053)T(0.004)R 47.062 0.009816 30051000.0 1824.9 1942.7 2018.0 1469.6 2037.9 1530.0 2159.0 2023.4 2216.9 2368.6 2009.2 True False 2010.162504579625 2106.4181469062432 2154.9536152198016 1560.3738542962394 1894.7649343733365 1517.540187269884 2241.161926450131 1983.0416996734073 2123.731402477417 2219.046191772195 1762.0811373681843 1.1407888444807774 1.1954149569141608 1.2229593572736412 0.8855289471101134 1.0752994820677364 0.8612203803148687 1.271883501231671 1.125397495960513 1.205240415687888 1.259332583905033 1.0 10.783064641260742 -11.134901568151863 1.5228889333448083 1.0004109503396046 1.1194793094396138 0.0 0.14622910896251667 0.763680570690926 3.1903334027463215 0.09020979734846746 0.019672704073809635 7.329906449621057e-12 11.134901568151863 0.11906835910000924 PRPS(ph)PSSTREPLLSSSENGNGGR ddPTM_A549_PD325901_60min_R1 1 PRPSPSSTREPLLSSSENGNGGR 23 2 M0QZR4;M0QYC1;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 PRPS(0.471)PS(0.176)S(0.176)T(0.176)REPLLSSSENGNGGR 63.316 0.00016036 19696000.0 5174.3 4234.6 5126.8 6822.3 6479.3 8758.0 5714.4 6634.9 6925.3 6434.9 6749.5 True False 5699.591126881669 4591.464603329991 5474.735477952861 7243.697976432525 6024.2163203715345 8686.677751705647 5931.864619039666 6502.561714521641 6634.253724379469 6028.599315813099 5919.354288605697 0.9628737948416004 0.7756698415852906 0.9248872784133411 1.2237311070189005 1.0177151132797861 1.467504279719637 1.0021134620135934 1.0985255143518904 1.1207732129076813 1.018455564894585 1.0 12.5312240930443 -6.067254805129838 6.871881801377734 1.092395531694646 0.8644079405442082 0.35563959331139383 0.13623380065144478 0.20000876067925116 17.33970172873967 0.018423854963906135 0.049642688956521526 8.565351596130589e-07 6.067254805129838 -0.22798759115043787 PRPVS(ph)PSSLLDTAISEEAR ddPTM_A549_MK2206_60min_R1 2 PRPVSPSSLLDTAISEEAR 19 1 A0A0B4J2F2;P57059 A0A0B4J2F2 LOC102724428;SIK1 Serine/threonine-protein kinase SIK1 1 PRPVS(0.932)PS(0.034)S(0.034)LLDTAISEEAR;PRPVS(0.902)PS(0.069)S(0.028)LLDTAISEEAR 67.827 0.00043176 6025200.0 626.47 765.62 502.22 736.37 1091.48 778.5799999999999 654.85 575.29 1018.54 876.72 794.62 True False 732.2028202790227 804.586787772578 573.442347825543 916.7806830569053 930.924737874813 860.9688188204234 773.8277684843025 656.8391192517345 787.8423162741559 678.6683430915159 597.2939236036746 1.2258668493752582 1.3470533617992229 0.9600672720153807 1.5348903560338603 1.5585705815626447 1.44144915057215 1.2955560703104765 1.0996916146221676 1.3190194728934106 1.1362384853957366 1.0 9.222297234789796 -10.819040667643772 0.4956930094722473 0.9218440470081352 1.3263710987004778 0.2220969190434804 0.17015099991112884 1.6501043909826514 0.5089863231824845 0.3276386973332662 0.04191346468726967 1.5169083164363232e-11 10.819040667643772 0.4045270516923426 PRPVS(ph)PSSLLDTAISEEAR ddPTM_A549_PD325901_60min_R1 1 PRPVSPSSLLDTAISEEAR 19 1 A0A0B4J2F2;P57059 A0A0B4J2F2 LOC102724428;SIK1 Serine/threonine-protein kinase SIK1 1 PRPVS(0.971)PS(0.025)S(0.004)LLDTAISEEAR 95.71 6.6423e-07 4255300.0 583.42 624.95 628.63 443.07 774.38 673.56 599.96 667.34 763.29 853.23 693.33 True False 642.6483689088964 677.6167297622159 671.2926120592782 470.437427615021 719.9902202659723 668.0747506781058 622.7918061107096 654.0293801818979 731.2115757124751 799.356912186857 608.0548053809891 1.0568921801485178 1.1144007477050384 1.1040001758372193 0.7736760296142366 1.1840877070527347 1.0987081176992097 1.0242363033715138 1.0756092615238892 1.2025422202762128 1.3146132636613301 1.0 9.24805755273305 PRPVSPS(ph)SLLDTAISEEAR ddPTM_A549_PD325901_60min_R1 1 PRPVSPSSLLDTAISEEAR 19 1 A0A0B4J2F2;P57059 A0A0B4J2F2 LOC102724428;SIK1 Serine/threonine-protein kinase SIK1 1 PRPVS(0.373)PS(0.492)S(0.135)LLDTAISEEAR 79.445 8.2425e-05 3561300.0 528.46 788.77 512.71 834.44 635.64 775.68 844.04 422.49 854.01 778.75 676.27 True False 582.1088701683095 855.2424160885556 547.5055837756911 885.9814636492617 590.9948392389554 769.3631192558844 876.1604040764097 414.06310551300686 818.1189295997735 729.5795920976934 593.093077228739 0.9814797921571538 1.4420037072169585 0.9231360216408897 1.4938320774018476 0.9964622112947468 1.297204686405677 1.4772730246158305 0.6981418623999797 1.3794106878172994 1.230126636289021 1.0 9.212114722065353 -11.158618174222049 1.5402923062936125 0.9997699777256913 1.2158077045567501 0.0 0.2585577767668317 0.7649630465742616 3.2496622033634353 0.1671265459909034 0.03533923934678396 6.9403572459284936e-12 11.158618174222049 0.21603772683105882 PRS(ph)PPLPAVIR ddPTM_A549_MK2206_60min_R1 2 PRSPPLPAVIR 11 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 PRS(1)PPLPAVIR;PRS(1)PPLPAVIR 56.138999999999996 0.0043816 14141100.0 695.3299999999999 525.5699999999999 597.91 569.74 916.89 647.76 737.13 411.12 732.9300000000001 963.87 842.64 True False 812.6847048136591 552.3192681090275 682.7026287052889 709.3263255766001 782.0166955968389 716.3055332517121 871.0569794347311 469.39751900219585 566.9225252487063 746.1310975632118 633.3892323190964 1.2830731299900517 0.8720060902942117 1.0778563857260977 1.1198900918783652 1.234654231069822 1.1309089209316445 1.3752317453289127 0.7410885677414186 0.8950618297898302 1.1779977610786363 1.0 9.306948531387931 -8.268158418753764 24.99979425389777 0.9333594708989885 1.1429299041128183 0.2788460981829275 0.15464062457856448 452.11554237715603 1682201.2700892386 0.022277497585175207 0.027240998124566228 5.393138596788201e-09 8.268158418753764 0.20957043321382973 PRS(ph)PPLPAVIR ddPTM_A549_PD325901_60min_R1 1 PRSPPLPAVIR 11 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 PRS(1)PPLPAVIR 95.57 7.9298e-05 16666000.0 766.66 759.06 801.93 653.35 1018.8 992.31 1322.3 736.1 1127.4 945.41 926.95 True False 844.4907588147378 823.0286501213018 856.3537921968363 693.7059456344917 947.2430026691965 984.2289563593314 1372.6208500903238 721.417908040721 1080.019298639108 885.7166512553202 812.9410264201861 1.0388093740741344 1.0124088013438526 1.0534021095820687 0.853328744754401 1.1652050663999747 1.2107015446045548 1.6884630071319038 0.8874172720959966 1.3285333911550883 1.0895214074206638 1.0 9.667006887736653 -6.894082692783017 9.079076836978887 1.184483108395902 0.9959741335803033 0.19912145944581916 0.1982898645128461 0.40717909625475035 32.15397208774717 0.029958824125721078 0.0567123468482605 1.276195788847859e-07 6.894082692783017 -0.1885089748155987 PRT(ph)HS(ph)GS(ph)SGGSGSR ddPTM_A549_MK2206_60min_R1 1 PRTHSGSSGGSGSR 14 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 3 PRT(0.887)HS(0.887)GS(0.611)S(0.611)GGS(0.003)GS(0.001)R 41.227 0.038813 22589000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 116.54 0.0 0.0 112.72 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 133.0599018887816 0.0 0.0 84.7285130862629 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.5704264956628247 0.0 0.0 1.0 6.404775646095657 -8.094368803045437 23.974713771546785 0.6019465021342765 3.2795517382092136e-12 0.36449839812691254 0.40688282539821063 35.27635721711486 8958.64492694197 0.06992899401175266 0.09027797028256979 8.046948038225857e-09 8.094368803045437 -0.6019465021309969 PRT(ph)HS(ph)GS(ph)SGGSGSR ddPTM_A549_PD325901_60min_R1 1 PRTHSGSSGGSGSR 14 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 3 PRT(0.875)HS(0.875)GS(0.625)S(0.625)GGS(0.001)GSR 47.242 0.012907 26616000.0 0.0 0.0 0.0 0.0 131.74 0.0 0.0 0.0 0.0 132.71 0.0 True False 0.0 0.0 0.0 0.0 122.48703687832739 0.0 0.0 0.0 0.0 124.33066795156972 0.0 0.0 PS(ph)PAQQTDRSSPVRPSSEK ddPTM_A549_PD325901_60min_R1 1 PSPAQQTDRSSPVRPSSEK 19 2 B3KV94;A0A3B3ISE6;A0A3B3ITA8;A0A3B3ITJ7;A0A3B3ITE7;A0A3B3IT25;A0A3B3IS40;Q9UGL1;Q9UGL1-2 B3KV94 KDM5B Lysine-specific demethylase 5B 1 PS(0.314)PAQQT(0.226)DRS(0.193)S(0.266)PVRPSSEK 60.398 0.00059828 4803000.0 1608.7 1138.6 1299.2 1133.6 1362.3 1259.2 1305.6 1535.4 1745.7 1238.6 1392.3 True False 1772.0140397376526 1234.553817917047 1387.371524724265 1203.6198974076058 1266.616747679864 1248.945492686429 1355.2853224517335 1504.7752425020024 1672.334299835277 1160.3945846192014 1221.055926516884 1.4512144785967347 1.0110542777828908 1.1362063723664186 0.9857205319341799 1.0373126407837387 1.022840531349863 1.1099289500340452 1.2323557093690543 1.369580429133729 0.9503205868131513 1.0 10.25391356448026 -8.11283079450643 6.630766781617182 1.1835769029929142 1.0933306072569617 0.0 0.15996818464149518 0.62206281273092 32.584531104937795 0.02762111421834026 0.035771588496308473 7.712038793189859e-09 8.11283079450643 -0.09024629573595244 PS(ph)QQPVLMT(ph)EPSLNPR ddPTM_A549_PD325901_60min_R1 2 PSQQPVLMTEPSLNPR 16 0 Q8TDG2 Q8TDG2 ACTRT1 Actin-related protein T1 2 PS(0.99)QQPVLMT(0.61)EPS(0.4)LNPR;PS(0.998)QQPVLMT(0.611)EPS(0.391)LNPR 53.828 0.046081 61319000.0 9417.8 10163.0 9959.3 10459.4 11716.7 9863.2 9290.0 11291.8 10103.1 10494.2 11322.900000000001 True False 10373.888122982069 11019.471677051602 10635.19798813605 11105.4533829791 10893.759412420659 9782.877369333535 9643.536033683058 11066.576190754266 9678.50184147665 9831.59442104862 9930.255081776937 1.0446748887668802 1.1096866682985307 1.0709894056651934 1.1183452279447257 1.097027148115445 0.9851587183582167 0.9711267187264868 1.1144302034156803 0.9746478576605467 0.9900646398389735 1.0 13.277615061880795 -7.259732500277768 24.955864477197082 0.9966951093026757 1.0900661872987105 0.487373168115544 0.041392541064581324 87.79076831095757 1283565.1976606476 0.006073608127176067 0.010182585034842033 5.4987946280778497e-08 7.259732500277768 0.09337107799603483 PS(ph)TPLDGVSTPKPLSK ddPTM_A549_MK2206_60min_R1 1 PSTPLDGVSTPKPLSK 16 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 PS(0.572)T(0.427)PLDGVS(0.001)TPKPLSK 65.95100000000001 0.00074186 2384100.0 2194.2 2623.5 2849.8 2728.9 3112.5 2803.3 2809.1 2386.9 4078.0 3056.2 3233.5 True False 2564.527316960479 2757.024944125491 3253.9444921214445 3397.480622504978 2654.655373103817 3099.9433453200604 3319.477108420636 2725.2503845746787 3154.339511227842 2365.8022973769152 2430.5327099399506 1.05512972792859 1.1343294961019499 1.3387783175326355 1.3978337376866312 1.0922113338558623 1.2754172501536294 1.3657405616658613 1.121256411579834 1.2977975973447295 0.9733678085062124 1.0 11.247056834608623 -10.85290152511357 0.9615932730044838 0.9916961468669464 1.2385586775456898 0.4099451528632925 0.11194163928393185 0.5097909163686626 0.7889544999206882 0.09115565183445135 0.019385868849352814 1.4031318241531571e-11 10.85290152511357 0.24686253067874342 PS(ph)TPLDGVSTPKPLSK ddPTM_A549_PD325901_60min_R1 1 PSTPLDGVSTPKPLSK 16 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 PS(0.511)T(0.462)PLDGVS(0.012)T(0.014)PKPLSK 49.528 0.0063068 3718600.0 3515.9 3447.0 4344.5 3965.1 5140.7 4672.5 3760.8 4323.0 5264.1 4262.2 4986.2 True False 3872.8315797312207 3737.4907872475515 4639.343895600805 4210.0152216045335 4779.634966452235 4634.448709162437 3903.9193019887257 4236.774373672109 5042.868183400858 3993.0839646083978 4372.929010126039 0.8856378804145268 0.8546881915057265 1.0609236703495186 0.9627449272228614 1.0930053873237866 1.0598042406887507 0.8927470107446827 0.968864201513757 1.1532014747377546 0.913137157123277 1.0 12.09438421264434 -4.934418440416782 0.5792473133305157 1.0559328657232554 0.6388428051014567 0.08998101178257156 0.08762835582213586 4.181277400575331 0.7262452942805205 0.015429782018732284 1.2692430665111143 1.1630049403590038e-05 4.934418440416782 -0.41709006062179865 PSALAQETSLGAPEPLSGEQLVGS(ph)PQDK ddPTM_A549_MK2206_60min_R1 2 PSALAQETSLGAPEPLSGEQLVGSPQDK 28 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 PSALAQETSLGAPEPLS(0.061)GEQLVGS(0.938)PQDK;PSALAQETSLGAPEPLS(0.114)GEQLVGS(0.885)PQDK 68.543 9.9874e-05 4339500.0 825.1600000000001 1258.52 1173.23 1054.58 1589.1100000000001 1125.41 1182.54 997.43 1748.2199999999998 1591.29 1680.1599999999999 True False 964.4268347749108 1322.5732924264582 1339.6116557272942 1312.9521473418947 1355.3540240812874 1244.5001392133022 1397.3922109543055 1138.8187570012653 1352.2509613336783 1231.816483801098 1262.9299019430048 0.7636424106287688 1.0472262081938932 1.0607173475474097 1.0396080933090042 1.0731823056814864 0.9854071372438418 1.1064685449322498 0.9017276059813013 1.0707252708588608 0.9753640973311035 1.0 10.302558850212153 -5.259527200457066 24.814282254461567 1.0325496525413125 0.7636423098350805 0.6512199627471777 0.05501861620869785 60.8076551485126 789030.0707377711 0.006652627433062858 0.05929283079306862 5.501394634450635e-06 5.259527200457066 -0.26890734270623196 PSALAQETSLGAPEPLSGEQLVGS(ph)PQDK ddPTM_A549_PD325901_60min_R1 2 PSALAQETSLGAPEPLSGEQLVGSPQDK 28 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 PSALAQETSLGAPEPLS(0.029)GEQLVGS(0.971)PQDK;PSALAQETSLGAPEPLS(0.013)GEQLVGS(0.987)PQDK 83.054 7.934899999999999e-07 7016900.0 1870.45 2160.4 2041.86 1958.0500000000002 2091.42 2051.0 2398.0 2199.73 2079.66 2438.9 2135.1000000000004 True False 2060.336707047486 2342.464489924461 2180.4328983016376 2078.9943014458045 1944.525874207314 2034.297336006883 2489.2572022359495 2155.854659495199 1992.2591224124606 2284.9074377747233 1872.4962355140403 1.100315540277644 1.2509848861092125 1.1644524869781978 1.11027956265828 1.0384671741000857 1.0864093061572564 1.3293790155752143 1.151326565366029 1.06395894668677 1.2202467457284192 1.0 10.870747102939873 -8.941070975376327 2.5648544579675034 1.0250909419174892 1.1556774682796285 0.0 0.09636332066927786 0.22222152615603344 2.872549580827942 0.014984304346760438 0.015362875151327053 1.1453257491778636e-09 8.941070975376327 0.1305865263621393 PSANRENFS(ph)PER ddPTM_A549_MK2206_60min_R1 3 PSANRENFSPER 12 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 PSANRENFS(1)PER;PSANRENFS(1)PER;PSANRENFS(1)PER 150.78 2.4265e-12 125804000.0 15093.6 17018.800000000003 19413.3 17501.1 25995.8 15695.900000000001 16763.8 14348.9 27158.3 28962.8 28554.0 True False 17641.030676909446 17884.98422682787 22166.397855604333 21788.87028565423 22171.852256428036 17356.82971990481 19809.565465858068 16382.900516663289 21006.988412893363 22420.08336446181 21463.25374969083 0.8219178174308058 0.8332839202949598 1.0327603686800577 1.0151708841427685 1.0330144960778564 0.8086765372260871 0.9229525819748283 0.7632999501251891 0.9787420238273966 1.0445798957571735 1.0 14.389581179442393 -8.969202544601844 24.999860380048684 0.9906215989767647 0.9087853264897066 0.2012531488357494 0.09033017152317192 266.29554076832267 216167.2163400138 0.015976413064061626 0.016843277877106374 1.073488646042634e-09 8.969202544601844 -0.08183627248705816 PSANRENFS(ph)PER ddPTM_A549_PD325901_60min_R1 2 PSANRENFSPER 12 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 PSANRENFS(1)PER;PSANRENFS(1)PER 102.38 5.9063e-05 255530000.0 11768.9 9863.3 12455.5 11664.4 14536.8 14536.2 14410.7 13131.5 16035.6 14721.6 16128.1 True False 12963.670064193739 10694.514906254359 13300.805131006058 12384.883496225546 13515.785317237505 14417.82200666175 14959.10707433762 12869.581931037541 15361.679497301122 13792.07566359603 14144.44594444944 0.9165201744279661 0.7560928825530346 0.9403553298053047 0.8756004685419028 0.9555542415955406 1.019327449324347 1.0575958318259804 0.9098682254208634 1.0860573512481306 0.9750877282689402 1.0 13.78794804523021 -6.861915206289556 1.1126660479149644 1.0331014532878462 0.8502176861275144 0.48180513977555717 0.06285095789924824 0.251266019731586 0.6083363004818589 0.009660341745345385 0.027372851019536588 1.3743102756632403e-07 6.861915206289556 -0.18288376716033183 PSAPS(ph)PPPR ddPTM_A549_MK2206_60min_R1 1 PSAPSPPPR 9 0 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 PS(0.018)APS(0.982)PPPR 46.352 0.037564 6103700.0 2502.7 3396.5 3253.0 3136.8 5399.7 3907.8 3205.7 3947.1 5012.1 5626.9 5180.9 True False 2925.094574859627 3569.3673423755386 3714.324314994406 3905.3161408163032 4605.411282939339 4321.320802212301 3788.1341947470833 4506.613512486785 3876.867352679027 4355.779381948227 3894.3395444341695 0.7511144165742307 0.916552678997114 0.9537751581787358 1.0028186028097683 1.182591099310136 1.1096415073483712 0.9727282769067027 1.1572215162716575 0.9955134390425422 1.1184898831365517 1.0 11.927162961662129 -5.320838547554368 1.309361921840716 1.0276137144096928 0.6561508522067362 0.5893680702007615 0.07572138365748289 0.710896910361455 1.1193671855218417 0.010927679318612145 0.3405376577357412 4.777068319851185e-06 5.320838547554368 -0.37146286220295666 PSDEVYRRGLQAIPLSVDLWIHYINFLK ddPTM_A549_MK2206_60min_R1 1 PSDEVYRRGLQAIPLSVDLWIHYINFLK 28 2 Q86UA1 Q86UA1 PRPF39 Pre-mRNA-processing factor 39 0 56.95 0.0010578 5203200.0 1193.1 1266.1 1055.9 1205.6 1424.2 1478.0 1120.5 958.77 1769.2 1619.7 1602.2 False True 1394.4661115055824 1330.5390820496596 1205.642497449306 1500.9720541214408 1214.702066626332 1634.4009789830027 1324.0803460130733 1094.678583609981 1368.4790248318534 1253.8086450694952 1204.3295215295457 1.157877546449709 1.1047965347223432 1.001090213181931 1.2463134277528525 1.0086127134736453 1.3571044716293672 1.099433603795944 0.9089527110650715 1.1362994930937436 1.0410843732179786 1.0 10.234014472467896 -13.428411934133278 0.276083293245906 0.6798349900619588 1.1269135439318123 0.09572662891631345 0.11474835128186568 30.67287490336767 0.8634997869861147 5.5183559547481495 0.04959895235190614 3.728962928708627e-14 13.428411934133278 0.4470785538698535 PSFNLLDS(ph)PHPR ddPTM_A549_MK2206_60min_R1 1 PSFNLLDSPHPR 12 0 A6NIT2;A6NMN0;P46020-3;P46020-2;P46020 A6NIT2 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform 1 PSFNLLDS(1)PHPR 115.68 7.9294e-06 2909000.0 204.06 183.0 152.64 138.36 445.25 208.73 255.29 326.46 381.66 368.3 438.12 True False 238.50033921199324 192.3139183438021 174.28664723047837 172.25820621121647 379.75431481910823 230.81767005623965 301.6728884727152 372.73670474181955 295.21461938578193 285.10077420454127 329.32271250313613 0.7242146689464123 0.5839679774348109 0.5292275346141473 0.5230681021114694 1.1531373342963458 0.7008859738273946 0.9160403367861923 1.1318281144616467 0.8964295755427759 0.8657185289090144 1.0 8.363358203942061 -6.747841565518416 24.999755587449787 0.9536569662130158 0.5853306605544409 0.6539845113802056 0.12660474431649013 102.6602639061758 188741.07502853152 0.016899681015448594 0.03502880790174797 1.787139420267614e-07 6.747841565518416 -0.3683263056585748 PSFNLLDS(ph)PHPR ddPTM_A549_PD325901_60min_R1 2 PSFNLLDSPHPR 12 0 A6NIT2;A6NMN0;P46020-3;P46020-2;P46020 A6NIT2 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform 1 PSFNLLDS(1)PHPR;PSFNLLDS(1)PHPR 96.993 7.838e-05 10376700.0 637.89 480.46999999999997 396.54 867.83 537.64 504.18 506.24 796.29 911.8299999999999 517.26 590.91 True False 702.6481232102013 520.9608931096117 423.45158898873154 921.4338881150699 499.8780211573092 500.0741252403463 525.5052402251571 780.4073712725794 873.5089560742401 484.6001153238562 518.2318160871163 1.355856783389934 1.0052661317537412 0.8171084365023781 1.7780341914788462 0.9645838129577098 0.9649622229220337 1.0140350783418866 1.5059040125421221 1.6855564034443626 0.9351029795561481 1.0 9.017453780171282 -8.253483446212176 24.614212547138962 1.346443182900868 1.124211341825897 0.037982218291943814 0.3136635929360039 983.604696450089 3043095.535985773 0.05486570815390146 0.07017845441107626 5.578488649850598e-09 8.253483446212176 -0.22223184107497107 PSGGFVISGVLS(ph)PDTISSKR ddPTM_A549_PD325901_60min_R1 1 PSGGFVISGVLSPDTISSKR 20 1 Q03188;H0Y8J2;H0Y9W1 Q03188 CENPC Centromere protein C 1 PSGGFVISGVLS(0.998)PDT(0.001)IS(0.001)S(0.001)KR 88.79 1.8991e-06 3777200.0 1985.2 1328.0 1482.6 1691.3 2193.5 2058.3 2120.4 1810.9 2367.0 2237.9 1985.4 True False 2186.736042573002 1439.915220616406 1583.2181515980565 1795.767759779008 2039.4361271641944 2041.5378872271892 2201.0929823274014 1774.780178876432 2267.523221464226 2096.5986120775974 1741.208386487554 1.2558726798830708 0.8269631778658438 0.9092640282946244 1.031334200842849 1.171276306150948 1.1724833759533366 1.264118068468271 1.0192807435625788 1.3022698713497347 1.2041055099136946 1.0 10.765873158622608 -6.630982903414045 4.370941569405625 1.1494363279194932 0.9788700204831193 0.24644818463048734 0.1295996200410979 0.25462984061564703 8.577508506009206 0.020638289971701612 0.04420096380740749 2.3389293119428416e-07 6.630982903414045 -0.1705663074363739 PSLLT(ph)PTGDPR ddPTM_A549_PD325901_60min_R1 1 PSLLTPTGDPR 11 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 PS(0.017)LLT(0.843)PT(0.141)GDPR 47.843999999999994 0.033277 6957700.0 2133.9 2489.6 2440.1 2242.0 2630.8 3046.0 2675.9 2482.9 3133.0 3813.5 4080.0 True False 2350.5319571058462 2699.4073292519593 2605.6998595132995 2380.483248048563 2446.021683767298 3021.1943858980812 2777.7328388086644 2433.3766117026303 3001.330905300981 3572.7149591840193 3578.1858652509436 0.6569060539679371 0.7544066828576121 0.7282181411586784 0.6652765780465169 0.6835926851988039 0.844336906933201 0.7762964092458785 0.6800587513728759 0.8387856356060177 0.9984710391598004 1.0 11.805012613335133 -9.71428322272373 0.38215611714942366 1.0344360919373035 0.6978875055406865 0.7927161710155306 0.05395308761227224 0.4451649306026177 0.13921599550921746 0.05923390788881531 0.023006493816956377 1.9307088053925435e-10 9.71428322272373 -0.336548586396617 PSMS(ph)PTPLDR ddPTM_A549_MK2206_60min_R1 4 PSMSPTPLDR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PS(0.084)MS(0.852)PT(0.064)PLDR;PS(0.001)MS(0.985)PT(0.014)PLDR;PS(0.007)MS(0.496)PT(0.496)PLDR;PS(0.002)MS(0.775)PT(0.222)PLDR 106.29 0.0001053 208807000.0 12223.3 11996.6 13854.800000000001 10725.1 18833.7 13889.300000000001 13521.6 13949.1 19674.0 19266.8 19982.3 True False 14286.294209006945 12607.17569837844 15819.61897306625 13352.749981468032 16063.287678851526 15359.05650702883 15978.299693574627 15926.427642327139 15217.87041292217 14914.41649862626 15020.14342657587 0.951142329555223 0.8393512192481432 1.0532268916337928 0.8889895124331744 1.0694496865076515 1.0225639044067518 1.0637914192818854 1.0603379202190397 1.0131641210560247 0.9929609907877083 1.0 13.874610968688039 -6.073278148895571 1.184078677296715 1.0176871578605227 0.900958421381503 0.3288465128999494 0.05867853153335943 0.4950253086778409 1.1413880092989181 0.008007930895588062 0.049228430044737724 8.447376499285697e-07 6.073278148895571 -0.11672873647901971 PSMS(ph)PTPLDR ddPTM_A549_PD325901_60min_R1 4 PSMSPTPLDR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PS(0.015)MS(0.902)PT(0.083)PLDR;PSMS(0.885)PT(0.115)PLDR;PS(0.005)MS(0.671)PT(0.325)PLDR;PS(0.004)MS(0.994)PT(0.002)PLDR 146.79 3.694e-08 297073000.0 26618.2 26069.8 28564.6 27051.300000000003 36475.399999999994 27475.5 29706.5 29897.0 31755.300000000003 32718.399999999998 33374.0 True False 29320.46006871685 28266.793537971054 30503.165528893725 28722.197363040195 33913.493737298784 27251.748637472985 30836.997113520552 29300.680881257224 30420.73517303041 30652.55464024292 29269.209575216904 1.0017510036739543 0.9657518582908837 1.0421588410341511 0.9813110015570806 1.1586747380432962 0.9310722439374597 1.0535643962053263 1.0010752359389632 1.0393425587682605 1.0472628091124585 1.0 14.837096165360606 -5.759753236495919 24.997763563204032 1.0222905507379485 0.9837514307387046 0.08251705770614848 0.05434140157149339 82.3815450010791 1221224.0688337015 0.006550393529133279 0.023018107758185368 1.7387885172671232e-06 5.759753236495919 -0.038539119999243865 PSPAQQTDRSS(ph)PVRPSSEK ddPTM_A549_PD325901_60min_R1 1 PSPAQQTDRSSPVRPSSEK 19 2 B3KV94;A0A3B3ISE6;A0A3B3ITA8;A0A3B3ITJ7;A0A3B3ITE7;A0A3B3IT25;A0A3B3IS40;Q9UGL1;Q9UGL1-2 B3KV94 KDM5B Lysine-specific demethylase 5B 1 PS(0.011)PAQQT(0.032)DRS(0.128)S(0.811)PVRPS(0.009)S(0.009)EK 44.258 0.010209000000000001 6997100.0 1182.9 1370.0 1746.6 1269.0 1507.7 1256.3 1662.9 1471.8 1673.0 1327.3 1765.9 True False 1302.9871371950453 1485.454708015418 1865.1347791590206 1347.3832478918946 1401.8043532826327 1246.0691093249377 1726.1825694737945 1442.443794395236 1602.6896280142175 1243.4940514815644 1548.7054949624119 0.8413395196397038 0.959158931667296 1.2043185649084873 0.8700061130244756 0.9051458510623128 0.8045875173673227 1.114597045783511 0.9313867608058335 1.0348575847553998 0.8029248010847568 1.0 10.596847109000798 -7.780261525955786 24.997746339264797 1.0158357657809263 0.9405589762639158 0.0 0.1233283766112081 427.17234726080375 567327.0274961859 0.01621600147984272 0.02242554888374307 1.6585878286681297e-08 7.780261525955786 -0.07527678951701045 PSPGTPTS(ph)PSNLTSGLK ddPTM_A549_MK2206_60min_R1 1 PSPGTPTSPSNLTSGLK 17 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 PSPGT(0.01)PT(0.038)S(0.874)PS(0.078)NLTSGLK 128.71 5.4814e-12 3321000.0 1943.6 1953.9 1984.4 2047.1 3432.1 2061.4 2421.7 2846.9 3458.2 3449.4 3028.5 True False 2271.632163542244 2053.345164218333 2265.8177591991716 2548.6395918978096 2927.2426364753774 2279.535979753424 2861.691543007461 3250.456793265595 2674.923221610624 2670.1781442876554 2276.4398676521214 0.997888060133635 0.9019984201630223 0.9953338945588291 1.1195725519103783 1.2858862112156215 1.0013600675973469 1.25709076864787 1.4278685061943046 1.175046729597778 1.1729623005775367 1.0 11.152563635613374 -6.192975283940578 3.720027218930897 1.1323593934018865 0.9508893495526352 0.3307793533086786 0.12415378996675576 0.2761675927353512 7.512589980596754 0.020054354298961262 0.05644675535368087 6.412460693927656e-07 6.192975283940578 -0.18147004384925136 PSPIYISSYS(ph)SPAR ddPTM_A549_PD325901_60min_R1 2 PSPIYISSYSSPAR 14 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 PSPIYIS(0.004)S(0.015)Y(0.001)S(0.49)S(0.49)PAR;PSPIYIS(0.001)S(0.005)YS(0.497)S(0.497)PAR 110.38 1.1275999999999998e-05 6953300.0 4948.3 4571.1 4805.0 4929.200000000001 6298.1 5357.4 4942.7 5562.0 6061.9 6454.6 5514.8 True False 5450.6477732540725 4956.3226392768465 5131.096194812263 5233.66548897457 5855.743183265473 5313.771110640311 5130.797153249223 5451.061546695409 5807.139423825095 6047.055454451076 4836.514561197524 1.1269784685408843 1.0247715739430459 1.0609078355678103 1.0821151105309008 1.2107361839133153 1.0986777861213797 1.0608460055951603 1.1270640205300493 1.2006868480071822 1.2502919980776035 1.0 12.239752027056525 -6.530463030278035 24.94301998813529 1.1052550752420864 1.0671473236500617 0.053060851085338756 0.07401061653401168 497.934804375268 1637596.9097723449 0.011530829959731018 0.024033528531236418 2.948064422653067e-07 6.530463030278035 -0.03810775159202473 PSPSTTPLPDS(ph)SPSR ddPTM_A549_MK2206_60min_R1 1 PSPSTTPLPDSSPSR 15 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 PSPSTT(0.001)PLPDS(0.585)S(0.399)PS(0.014)R 60.55 0.005554600000000001 1597800.0 2475.2 2240.1 2051.3 2289.6 3043.1 2143.7 1953.1 2264.4 3211.5 3165.5 3292.0 True False 2892.953247170077 2354.111521759295 2342.2051851669307 2850.5521027840496 2595.464021170193 2370.5449111271064 2307.952988664107 2585.3856344341602 2484.100377711677 2450.41135146477 2474.5055454220865 1.1691035619306378 0.9513462300031923 0.946534627695656 1.1519683631575048 1.0488818770165553 0.9579873100356108 0.9326925910244547 1.0448089878873803 1.0038774745554082 0.9902630268895977 1.0 11.272924559982371 -7.224772724894604 22.667807839211843 0.9969533899633762 1.0474085502915538 0.1711882027790793 0.06953617122377924 338.948413681055 209541.09695503372 0.00983892070722785 0.01704087081682684 5.9597394718207866e-08 7.224772724894604 0.05045516032817754 PSRKSVCINPLMS(ph)PK ddPTM_A549_MK2206_60min_R1 1 PSRKSVCINPLMSPK 15 2 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 PSRKS(0.004)VCINPLMS(0.996)PK 56.851000000000006 0.0044172 29720000.0 2037.2 2728.6 2343.6 2270.0 2862.1 2741.9 2441.3 1994.4 3907.4 3457.7 3300.9 True False 2381.029555241953 2867.474085207093 2675.9577204490897 2826.150101904173 2441.0888814009454 3032.0460380740847 2884.8526093009527 2277.1123075938413 3022.3801388356237 2676.6031685230555 2481.1954297945817 0.9596299939336412 1.1556824790075046 1.0784953447502652 1.1390276106296673 0.9838357962810866 1.222010165610013 1.1626865722301407 0.9177480662143422 1.2181145034133192 1.0787554806775748 1.0 11.276819657333608 -5.2459189396722286 23.40160375886141 1.1001300411963506 0.9596297396381417 0.14881705896501596 0.09294475891686282 1850.8929059586662 2790649.407072985 0.013631973840965043 0.42157087076467586 5.67650546532218e-06 5.2459189396722286 -0.14050030155820892 PSRKSVCINPLMS(ph)PK ddPTM_A549_PD325901_60min_R1 2 PSRKSVCINPLMSPK 15 2 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 PSRKS(0.208)VCINPLMS(0.792)PK;PS(0.001)RKS(0.203)VCINPLMS(0.796)PK 63.336999999999996 0.0017429000000000001 150892000.0 13726.5 12747.7 14207.5 19138.3 16317.8 23505.0 15263.7 16037.599999999999 17636.5 16287.3 19076.0 True False 15120.004175084772 13821.993417057043 15171.706386637925 20320.429324767105 15171.69402135395 23313.583073057896 15844.568456117122 15717.717486746185 16895.299237580835 15258.917098391996 16729.77293272719 0.903778206427814 0.8261913340149477 0.9068686375867457 1.2146267260457422 0.9068678984682876 1.39353852361327 0.9470880758412201 0.9395057273012236 1.0098941154502963 0.9120815422749778 1.0 14.030130243870632 -6.0194311748168845 24.155680566366676 1.0291632890169427 0.8653710140358436 0.20985813727848568 0.13975207698986086 512.3993386368884 636987.5508967233 0.017488647276635457 0.04710501944670545 9.562442246199832e-07 6.0194311748168845 -0.16379227498109905 PSS(ph)PGGLPEEDSVLFNK ddPTM_A549_MK2206_60min_R1 2 PSSPGGLPEEDSVLFNK 17 0 A0A0U1RQY6;A0A0C4DG54;Q5R372-2;Q5R372-4;Q5R372;Q5R372-3 A0A0U1RQY6 RABGAP1L Rab GTPase-activating protein 1-like 1 PS(0.101)S(0.899)PGGLPEEDSVLFNK;PS(0.025)S(0.975)PGGLPEEDSVLFNK 159.22 3.0235000000000005e-22 7160300.0 3012.5 2879.7 3986.8 2518.5 4222.2 3482.2 3509.0 3281.3999999999996 5237.6 3599.1 3778.5 True False 3520.9363514462884 3026.264429806811 4552.188189062311 3135.53261305976 3601.1199731145175 3850.6840927027165 4146.539878768296 3746.5484988660382 4051.2919627285296 2786.0608103164914 2840.1941687051503 1.239681564817623 1.065513218480584 1.6027735847150413 1.1039853005857183 1.2679133042359123 1.35578198671475 1.4599494374212842 1.3191170308521887 1.426413731627201 0.9809402614141207 1.0 11.471773847016143 -10.8826455258567 1.1143128612823292 0.9987743020696573 1.3227868682519022 0.42062186321391903 0.14620150134848064 0.39966631998169744 0.8756888740660463 0.10066682626809476 0.02383878552553806 1.3102509224928144e-11 10.8826455258567 0.32401256618224483 PSS(ph)PGGLPEEDSVLFNK ddPTM_A549_PD325901_60min_R1 2 PSSPGGLPEEDSVLFNK 17 0 A0A0U1RQY6;A0A0C4DG54;Q5R372-2;Q5R372-4;Q5R372;Q5R372-3 A0A0U1RQY6 RABGAP1L Rab GTPase-activating protein 1-like 1 PS(0.004)S(0.996)PGGLPEEDSVLFNK;PS(0.011)S(0.989)PGGLPEEDSVLFNK 201.3 2.6835e-48 11871400.0 6388.9 5512.3 6505.9 5495.799999999999 7981.1 6315.2 7277.5 6980.299999999999 7116.299999999999 7042.6 6910.900000000001 True False 7037.4964247404 5976.840866418534 6947.429497154853 5835.263084132602 7420.5350693002765 6263.771104997883 7554.449244900807 6841.072440560588 6817.226658599866 6597.929034102366 6060.903111804595 1.1611299990976147 0.9861304093077586 1.1462696844012576 0.9627712201449776 1.2243282778844586 1.0334715783194373 1.2464230339183755 1.1287216301538439 1.1247872689669314 1.0886049343458115 1.0 12.565317064803526 -10.671588637115788 0.9721986376996962 1.001017151011099 1.1108035979001922 0.05038317771387557 0.08842280198968555 0.6823140938091186 1.1632898218837442 0.05059011759994374 0.013909541578553591 2.130155770094339e-11 10.671588637115788 0.10978644688909323 PSS(ph)SPVIFAGGQDR ddPTM_A549_MK2206_60min_R1 1 PSSSPVIFAGGQDR 14 0 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 PS(0.014)S(0.493)S(0.493)PVIFAGGQDR 131.08 9.0762e-09 54836000.0 2954.0 3185.8 3671.3 2753.1 4477.4 3548.1 3000.7 3054.7 5522.7 5791.8 4696.8 True False 3452.562981633971 3347.943612348003 4191.945544924366 3427.6096235913574 3818.7803911759142 3923.557586961837 3545.888348310066 3487.713079626405 4271.817267939678 4483.428357420206 3530.454934914476 0.9779371342457338 0.9483037382062224 1.1873669604073036 0.970869105194906 1.0816680743917846 1.1113461747265962 1.0043715083976745 0.9878933859584569 1.2099905951761316 1.269929354735926 1.0 11.785638386021343 -5.72758216214155 24.97625685701937 1.0827754323264631 0.9631202100772619 0.2115911179256178 0.09435468204602732 221.42338284453078 163339.65134187357 0.012345881897142143 0.047810560618596024 1.8724828032436283e-06 5.72758216214155 -0.11965522224920122 PSS(ph)SPVIFAGGQLTK ddPTM_A549_PD325901_60min_R1 1 PSSSPVIFAGGQLTK 15 0 F8VZX2;H3BRU6 F8VZX2 PCBP2 1 PS(0.08)S(0.46)S(0.46)PVIFAGGQLTK 98.676 1.1530999999999999e-05 3110800.0 1539.9 1798.1 2109.0 2299.7 2491.0 2473.5 2156.3 2557.6 2040.6 2620.5 2883.3 True False 1696.229514385536 1949.6321974324978 2252.129422447256 2441.747246002357 2316.040753483478 2453.3566360863124 2238.3591764726348 2506.5866616016133 1954.8406783776518 2455.041182782673 2528.6723787446167 0.6707984508565105 0.7710102003804903 0.8906370953303752 0.9656242012714139 0.9159117539114728 0.9702153021912251 0.8851914527511426 0.9912658842922276 0.773069969367938 0.9708814805030224 1.0 11.304164414514773 -5.585963453843868 2.4169824542488008 0.9089793983894626 0.6729145672965959 0.6156084575784411 0.06410702891204936 0.23114937057764917 2.39559989146019 0.011816623379059204 0.08438946545827888 2.594397673143043e-06 5.585963453843868 -0.2360648310928667 PSSS(ph)PVIFAGGQDR ddPTM_A549_MK2206_60min_R1 1 PSSSPVIFAGGQDR 14 0 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 PSS(0.003)S(0.997)PVIFAGGQDR 86.214 0.00012165 54043000.0 1664.1 1806.2 1624.3 1871.3 2640.4 2081.1 1862.7 2051.2 2801.0 3177.3 3590.9 True False 1944.9593966611685 1898.12786509604 1854.6501644160514 2329.768584005849 2252.000657716729 2301.3206206776226 2201.1284788206613 2341.9638815365433 2166.577972277877 2459.545723269315 2699.180426201753 0.7205740593629328 0.7032237810671507 0.687116039525334 0.8631392556755699 0.8343275743465994 0.8525997737453984 0.8154803055970796 0.8676574040039703 0.8026799361933183 0.9112194573559321 1.0 11.398305701365507 -14.999999999999998 0.08439730824072046 1.6628571201693574 0.5991049184743685 0.6679618562840206 0.05138996910560099 58.940424618022945 0.36573666978409564 7.304114864206866 0.668488070471509 1.000000000000004e-15 14.999999999999998 -1.0637522016949887 PSSS(ph)PVIFAGGQDR ddPTM_A549_PD325901_60min_R1 2 PSSSPVIFAGGQDR 14 0 Q15366-6;Q15366-3;Q15366;Q15366-2;H3BSS4 Q15366-6 PCBP2 Poly(rC)-binding protein 2 1 PSS(0.025)S(0.975)PVIFAGGQDR;PS(0.003)S(0.08)S(0.917)PVIFAGGQDR 256.96 6.694799999999998e-70 193590000.0 22568.1 19799.6 22627.6 19741.4 27897.0 22507.2 23126.3 22654.2 24985.9 24498.0 23393.0 True False 24859.196898242873 21468.18177870225 24163.245006812474 20960.78144202763 25937.610959425376 22323.90882543837 24006.384001696933 22202.344209123912 23935.829513807785 22951.19209914515 20515.809300444915 1.2117092986287294 1.0464213945601786 1.1777865865758685 1.021689231707426 1.2642743252084567 1.0881320107101136 1.1701407266042545 1.082206599017394 1.1667016963980408 1.1187076153338695 1.0 14.324448445830063 -10.847963647619311 0.9171316567935318 0.9936318691373566 1.1358169073364044 0.054598183099702546 0.0770719148210135 0.5281206658199343 0.7282343944973679 0.05316279483299968 0.01084740947415343 1.4191763080896836e-11 10.847963647619311 0.14218503819904782 PSSS(ph)PVIFAGGQLTK ddPTM_A549_PD325901_60min_R1 1 PSSSPVIFAGGQLTK 15 0 F8VZX2;H3BRU6 F8VZX2 PCBP2 1 PS(0.005)S(0.029)S(0.965)PVIFAGGQLTK 125.73 1.2462e-07 4017700.0 1970.3 2134.5 1990.6 1979.0 2794.8 2084.2 2242.2 2757.7 2477.7 2134.5 2313.5 True False 2170.3234055418025 2314.3818060284016 2125.6940864502144 2101.2383353649 2598.502889536583 2067.226966214308 2327.52814797892 2702.6955101262006 2373.570885433846 1999.727305723951 2028.9541664848177 1.0696759154998106 1.140677223891208 1.047679697039682 1.0356263192506292 1.2807104923609556 1.0188633140963446 1.1471565925076488 1.3320633628746017 1.1698494350644104 0.9855951104053264 1.0 10.986520560041571 -2.000900731447915 13.631659116793564 1.1070209651771814 0.0003941052924112398 0.0 0.10933097894180367 0.0 0.0 0.014512749089599982 0.0 0.0099792813846952 2.000900731447915 -1.1066268598847702 PSSTTPTPLVS(ph)ETGGNSPSDKVDNELK ddPTM_A549_MK2206_60min_R1 1 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTT(0.002)PT(0.011)PLVS(0.325)ET(0.325)GGNS(0.325)PS(0.01)DKVDNELK 62.677 0.00016327 1655200.0 820.73 437.65 876.53 754.93 756.08 753.56 968.83 732.36 1033.6 1556.3 1229.3 True False 959.2491590780128 459.9245156457101 1000.8351342828305 939.8878838900952 644.8616335731195 833.3012190273553 1144.8538702613528 836.1742727584362 799.4912503200339 1204.7307491027073 924.0308830459815 1.0381137434670338 0.4977371688374872 1.083118705928606 1.017160682759696 0.6978788754845437 0.9018110047149677 1.238977929490245 0.9049202663032927 0.8652213524342236 1.3037775806057748 1.0 9.851797260109477 -7.527895923587509 24.995866801261098 0.9576388585005922 0.8599866778903204 0.08486177536702655 0.207977898115609 325.82947827558337 1623295.6643249865 0.026704876529078294 0.03968629980488947 2.9655419810790493e-08 7.527895923587509 -0.09765218061027181 PSSTTPTPLVSETGGNS(ph)PSDKVDNELK ddPTM_A549_MK2206_60min_R1 2 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTTPTPLVS(0.001)ET(0.037)GGNS(0.942)PS(0.02)DKVDNELK;PSSTTPTPLVSET(0.002)GGNS(0.964)PS(0.033)DKVDNELK 120.15 4.3071e-18 35235000.0 4522.3 5232.299999999999 5458.4 4777.7 8816.5 5728.8 6310.9 6080.1 8271.5 8831.3 8575.8 True False 5285.553680380268 5498.601721039756 6232.483197345675 5948.2367144791015 7519.604529146929 6335.017813530332 7457.508840387243 6941.972794525322 6398.018456871288 6836.303196395775 6446.192179960726 0.8199497521670958 0.8529999676604827 0.9668472523547454 0.9227519981440176 1.1665188252567336 0.9827534824704728 1.156885899798395 1.0769106164885727 0.9925267938428526 1.0605180555503428 1.0 12.654231484685877 -5.861816429108467 1.4670276137513492 1.0219731173374351 0.8107818270907164 0.556244682769708 0.07054612001519808 0.32009075630656875 1.1538105168950998 0.010310856122312877 0.07094191506352591 1.3746228882787346e-06 5.861816429108467 -0.21119129024671868 PSSTTPTPLVSETGGNS(ph)PSDKVDNELK ddPTM_A549_PD325901_60min_R1 2 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTTPTPLVS(0.001)ET(0.014)GGNS(0.492)PS(0.492)DKVDNELK;PSSTTPTPLVSET(0.001)GGNS(0.845)PS(0.154)DKVDNELK 174.46 4.716899999999999e-49 48783000.0 6738.799999999999 6252.8 8320.5 7894.7 8931.8 8058.0 8403.900000000001 7736.700000000001 8736.7 9384.2 9116.900000000001 True False 7422.9180151576375 6779.745400203508 8885.179165231095 8382.337688835418 8304.46118103722 7992.378319621389 8723.715013290535 7582.385449176261 8369.526881692658 8791.680010482414 7995.579096790759 0.9283777854360825 0.8479367558160662 1.111261493091526 1.0483715547507866 1.0386316088562542 0.9995996816327345 1.0910673145353578 0.9483222362492363 1.0467693184414864 1.0995676365719642 1.0 12.96498681240303 -5.7503852315853266 24.999621239568686 1.027993364919268 0.8881572366197155 0.5692270428656364 0.050532163044817204 104.38763726725121 236074.22169633373 0.005856525863163405 0.022258341924895918 1.7767027248967906e-06 5.7503852315853266 -0.1398361282995526 PST(ph)PAEEDEDDPEQEK ddPTM_A549_MK2206_60min_R1 2 PSTPAEEDEDDPEQEK 16 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PS(0.131)T(0.869)PAEEDEDDPEQEK;PS(0.158)T(0.842)PAEEDEDDPEQEK 66.285 0.0027205 3199500.0 1381.04 1351.54 1279.8200000000002 1080.07 1958.38 1872.8899999999999 1982.2 1865.6599999999999 2089.3 1913.1 2222.44 True False 1614.1257888137368 1420.327613105913 1461.3177205091117 1344.687198486184 1670.3048962502999 2071.0779766762353 2342.3400819876083 2130.123018344125 1616.0768859265165 1480.9293812943465 1670.5468117763853 0.9662260150000509 0.850217188224495 0.8747541285330468 0.8049383525244068 0.9998551878197126 1.2397605155846803 1.402139745785913 1.2751052549548412 0.9673939542035653 0.886493794040762 1.0 10.70610469485452 -6.939888782946979 6.361583119889552 1.061509595548598 0.8741966066303462 0.33980317589335995 0.15095305062739217 0.2595895283494272 20.74961937824885 0.02510528235193958 0.04769256558887167 1.1484476860528891e-07 6.939888782946979 -0.18731298891825188 PST(ph)PAEEDEDDPEQEK ddPTM_A549_PD325901_60min_R1 1 PSTPAEEDEDDPEQEK 16 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PS(0.014)T(0.986)PAEEDEDDPEQEK 91.441 1.015e-05 1866700.0 907.74 1011.2 1158.0 879.57 1363.4 946.31 1156.1 1017.1 1164.7 1003.7 971.39 True False 999.8930965571305 1096.4173728067085 1236.5888436196867 933.8990412515949 1267.6394874746582 938.6035651080801 1200.096018142195 996.813142600486 1115.7517093533525 940.3262107074864 851.9151881485573 1.173700281984841 1.2870029646842203 1.4515398490630618 1.0962347593323354 1.487987894933042 1.1017570506612522 1.408703630170427 1.1700849526662758 1.30969810712987 1.1037791364549683 1.0 9.734566000826895 -10.825462879366095 0.6735642789127606 0.9609171018950269 1.2836886590316368 0.2915630102080182 0.13107629745261423 0.7466657959706998 0.4800106739962516 0.1439105651362511 0.022495455793723675 1.4946417890497117e-11 10.825462879366095 0.3227715571366099 PST(ph)PAEEDEDDPEQEKEAGEPGRPGTKPPK ddPTM_A549_PD325901_60min_R1 1 PSTPAEEDEDDPEQEKEAGEPGRPGTKPPK 30 3 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PS(0.15)T(0.85)PAEEDEDDPEQEKEAGEPGRPGTKPPK 136.12 2.294e-28 19626000.0 1972.4 1844.1 2159.7 2020.9 2194.0 2493.8 2314.8 2450.3 2407.4 2287.7 2993.7 True False 2172.6365959958644 1999.5087788695125 2306.2702293311213 2145.726403203098 2039.9010088891018 2473.4913196167554 2402.8909807071636 2401.4268442768357 2306.2253499590106 2143.2542315786764 2625.4938786278785 0.8275153919350655 0.7615743442199473 0.8784138664746809 0.8172658183170041 0.7769589658899467 0.9421051558152701 0.9152148478681464 0.9146571865297421 0.8783967727870985 0.8163242158076455 1.0 11.35837311667046 -14.999999969356496 0.045086889921578124 1.661348279946505 0.4978236176177605 0.055422606848616995 0.06809668676747947 204.89216497599807 0.7076172328334139 17.36468907027203 4.683633092488251 1.0000000705592774e-15 14.999999969356496 -1.1635246623287445 PST(ph)PLDGVSTPKPLSK ddPTM_A549_MK2206_60min_R1 1 PSTPLDGVSTPKPLSK 16 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 PS(0.421)T(0.578)PLDGVSTPKPLSK 56.016999999999996 0.0044315 1915900.0 1840.1 3029.1 3196.8 2314.5 4151.1 2995.6 3053.6 3149.7 3837.3 3779.3 4513.5 True False 2150.663893874295 3183.268251667818 3650.1543099213395 2881.5526039018514 3540.478688928919 3312.5924036816546 3608.399593561373 3596.1796205517044 2968.157676908926 2925.553505162155 3392.673383737117 0.6339142176737577 0.9382772497131351 1.075893225507196 0.8493457158931541 1.0435660284601256 0.9763959064142946 1.0635859056926453 1.0599840343577134 0.8748728041835326 0.8623151050100739 1.0 11.728206831615239 -5.268517442781218 4.776612313831998 0.9669168351119078 0.6168342879679743 0.6003466638921942 0.07992920921968845 0.08884032256689407 5.701127934063831 0.010755045162860749 0.10208509036795096 5.3886820211207925e-06 5.268517442781218 -0.3500825471439335 PST(ph)PLDGVSTPKPLSK ddPTM_A549_PD325901_60min_R1 1 PSTPLDGVSTPKPLSK 16 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 PS(0.202)T(0.675)PLDGVS(0.111)T(0.013)PKPLSK 51.265 0.0077453 3567400.0 4032.9 3699.4 3631.4 3683.1 4560.0 4637.8 4422.4 4691.8 4715.3 4613.5 4247.5 True False 4442.317039135934 4011.1614210454313 3877.8486413821515 3910.5967220729985 4239.721331145992 4600.031294457688 4590.696852030139 4598.218368354103 4517.1323388974515 4322.202822655164 3725.0844271209266 1.1925413037065975 1.0767974523856927 1.0410095978359595 1.0498008296406458 1.1381544268576007 1.2348797415077644 1.2323739077179074 1.234393060966946 1.2126254927297553 1.1602966072894467 1.0 11.863057408547858 -5.230846404431278 21.081060615229383 1.1215640291786295 1.1925422626132418 0.0 0.08330565381966915 3975.073820493584 2738765.155215015 0.014395103879940009 1.593743307867823 5.876971647944064e-06 5.230846404431278 0.07097823343461229 PSTQPRPDS(ph)WGEDNWEGLETDSR ddPTM_A549_MK2206_60min_R1 2 PSTQPRPDSWGEDNWEGLETDSR 23 1 H0YDH0;E9PPN3;E9PS17;Q96KG9-3;Q96KG9-2;Q96KG9 H0YDH0 SCYL1 N-terminal kinase-like protein 1 PS(0.026)T(0.026)QPRPDS(0.948)WGEDNWEGLETDSR;PS(0.001)T(0.001)QPRPDS(0.999)WGEDNWEGLETDSR 77.52199999999999 2.4611999999999997e-05 19681400.0 1710.19 1604.67 1678.6999999999998 1151.77 2598.3999999999996 2137.27 1710.2399999999998 1973.98 2815.0 2625.9 2894.7 True False 1998.8282618688554 1686.340848900268 1916.7649024227196 1433.9537017049208 2216.178802079665 2363.4344927949937 2020.9684702948653 2253.7977100602125 2177.4069946312834 2032.7073662332452 2175.8661003442626 0.9186356924962449 0.7750205072975113 0.8809204307744174 0.6590266292020647 1.0185271978496397 1.086204014310005 0.9288110467712651 1.0358163628284018 1.0007081751431197 0.9342060919610968 1.0 11.087374062613812 -6.792666964098386 24.99921432624217 1.0052241656386798 0.8111964305548159 0.6121452042827245 0.0735278724285612 82.15068157229096 65765.44434743514 0.009017095253452394 0.017041894797104655 1.6118812220087367e-07 6.792666964098386 -0.19402773508386384 PSTQPRPDS(ph)WGEDNWEGLETDSR ddPTM_A549_PD325901_60min_R1 2 PSTQPRPDSWGEDNWEGLETDSR 23 1 H0YDH0;E9PPN3;E9PS17;Q96KG9-3;Q96KG9-2;Q96KG9 H0YDH0 SCYL1 N-terminal kinase-like protein 1 PSTQPRPDS(1)WGEDNWEGLETDSR;PSTQPRPDS(1)WGEDNWEGLETDSR 192.07 7.8499e-51 55670000.0 11216.8 7467.2 8611.6 8553.5 8725.6 9303.9 7942.9 7492.700000000001 11497.2 10297.5 13490.2 True False 12355.52127862827 8096.487150140675 9196.034961757605 9081.830268592057 8112.743957685844 9228.132123098212 8245.17140602166 7343.252220590558 11014.01266658999 9647.314092617658 11830.99092142359 1.0443352852426637 0.6843456481299072 0.7772835785974106 0.7676305669499462 0.6857197348529163 0.779996551800905 0.6969130025356778 0.6206793893564213 0.9309459148215375 0.8154273937568726 1.0 13.530283293256996 -8.90808098755872 6.80065991165289 0.9698603644656969 0.7522997117153752 0.24969834886968378 0.11332033813571302 0.12962139747126655 8.080079445848078 0.01711525562199637 0.01813528806243021 1.2357169745345583e-09 8.90808098755872 -0.21756065275032166 PSVPSADSETPLTQDRPGS(ph)PSGSEDKGNPAPELR ddPTM_A549_MK2206_60min_R1 1 PSVPSADSETPLTQDRPGSPSGSEDKGNPAPELR 34 2 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 PSVPSADSET(0.002)PLT(0.01)QDRPGS(0.943)PS(0.037)GS(0.008)EDKGNPAPELR 99.846 5.1731e-11 6630000.0 1286.7 1178.6 1056.4 1118.2 2003.1 1256.0 1235.7 1018.2 2136.0 1588.4 1519.0 True False 1503.8635032052916 1238.5857057923781 1206.21340496775 1392.1590501979053 1708.4466434905237 1388.909086334677 1460.2106948401197 1162.5329681067226 1652.1994104910925 1229.5793368082889 1141.7903777327308 1.3171099814236782 1.0847750427288196 1.0564228149854835 1.2192772660795541 1.4962874769386394 1.2164308908371197 1.2788780877096553 1.01816672375115 1.4470251656629722 1.0768871071149522 1.0 10.15708209406283 -6.4826042014833645 23.317287833592577 1.2278663508441077 1.1446164749848113 0.030420932657078348 0.16028903496222385 752.647462170638 435749.1598120418 0.026746047989292483 0.062140047629017016 3.2915146963050124e-07 6.4826042014833645 -0.08324987585929633 PSVPSADSETPLTQDRPGS(ph)PSGSEDKGNPAPELR ddPTM_A549_PD325901_60min_R1 1 PSVPSADSETPLTQDRPGSPSGSEDKGNPAPELR 34 2 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 PSVPSADSETPLT(0.004)QDRPGS(0.95)PS(0.023)GS(0.023)EDKGNPAPELR 171.85 2.3629999999999996e-63 10498000.0 1571.1 1668.5 1738.5 1811.4 2148.0 1863.3 1502.4 1587.5 2018.5 1418.1 2167.3 True False 1730.5969154173101 1809.1103506012587 1856.485064449764 1923.286064012119 1997.131890197716 1848.1259025751458 1559.574654144826 1555.8360671303424 1933.6694645228308 1328.5609239855407 1900.735839646659 0.9104878643941511 0.9517947275290851 0.9767191346246613 1.0118639444235722 1.0507151222912579 0.9723212789625236 0.8205109945392233 0.818544078918177 1.0173267763932383 0.6989718909243675 1.0 10.892342327793749 PT(ph)HSGGGGGGGGGGGGGGGGR ddPTM_A549_MK2206_60min_R1 1 PTHSGGGGGGGGGGGGGGGGR 21 0 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 PT(0.5)HS(0.5)GGGGGGGGGGGGGGGGR 44.382 0.037974 2595100.0 0.0 169.07 94.669 0.0 159.05 0.0 212.98 93.242 122.36 0.0 290.52 True False 0.0 177.67494084364267 108.09448772708437 0.0 135.65395569226098 0.0 251.67570914222603 106.45933904164905 94.64565536876871 0.0 218.37586605590047 0.0 0.8136198566839842 0.49499282901258895 0.0 0.6211948148955979 0.0 1.1524886595197354 0.4875050570578952 0.4334071208424701 0.0 1.0 7.770669614506113 -14.999999999985882 0.20153737510198047 3.6276762457261937 0.35346973740132004 0.0 0.4500561209975209 43.83947497876006 0.5178242120203155 45.450407135686284 0.2656772981238718 1.000000000032509e-15 14.999999999985882 -3.2742065083248737 PT(ph)SSPAKGPPQK ddPTM_A549_MK2206_60min_R1 1 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PT(0.333)S(0.333)S(0.333)PAKGPPQK 57.019 0.058119000000000004 1617300.0 748.83 880.61 930.62 792.96 1452.6 814.04 827.81 890.51 997.65 1121.0 1130.3 True False 875.2141968642402 925.4292876105762 1062.5959096280649 987.2352355973272 1238.924464247584 900.1811724839803 978.2123616537995 1016.7425195724985 771.6838679196807 867.7653214316871 849.6153153069812 1.0301299671699182 1.0892332929241066 1.2506788548699008 1.1619790954929072 1.4582181393469096 1.0595161789882857 1.1513591434028634 1.1967092650691347 0.9082744319890909 1.021362616466192 1.0 9.730665962411946 -8.75663538371096 24.99762609323423 0.9566851437874425 1.178815235757691 0.38053425674403263 0.11174456591373896 77.87973329520254 405247.05753489764 0.018817263778907866 0.021003132160175363 1.7513164068382244e-09 8.75663538371096 0.22213009197024858 PTGS(ph)PLSAEFSGTR ddPTM_A549_PD325901_60min_R1 1 PTGSPLSAEFSGTR 14 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 PT(0.076)GS(0.773)PLS(0.143)AEFS(0.006)GT(0.002)R 47.843999999999994 0.030851 8857800.0 3658.9 3546.7 4162.0 3749.7 4503.2 3610.8 3918.3 3846.8 4019.5 4925.5 4585.1 True False 4030.348834460181 3845.592856144732 4444.458348139154 3981.3104528134263 4186.910767196629 3581.3948419569233 4067.4130506760325 3770.0725562437788 3850.5743931877732 4614.503089408911 4021.1617673436494 1.0022846798134661 0.9563387594538638 1.105267235014803 0.990089601752941 1.0412191822768853 0.890636848047714 1.0115019703280768 0.9375580427678893 0.9575775897549715 1.1475547009533065 1.0 11.973396660156256 PTHS(ph)GGGGGGGGGGGGGGGGR ddPTM_A549_PD325901_60min_R1 2 PTHSGGGGGGGGGGGGGGGGR 21 0 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 PT(0.18)HS(0.82)GGGGGGGGGGGGGGGGR;PT(0.296)HS(0.704)GGGGGGGGGGGGGGGGR 65.833 0.00040425 5535000.0 402.82 356.26 158.5 422.37 394.89 118.41 124.46 136.31 320.188 474.40999999999997 521.97 True False 443.7139898595893 386.28328049457883 169.2567631379279 448.4588356281318 367.15428869654386 117.44570821871037 129.19639340712527 133.59119011687363 306.7316118437635 444.45567163668284 457.77099904044934 0.9692924863953254 0.8438351955547237 0.36974112272886056 0.9796575942297849 0.8020479442038694 0.25655995784986957 0.2822293104585887 0.29182973669563833 0.6700547052712272 0.9709126890264406 1.0 8.838482257155398 -10.100917497796386 1.041957437016946 0.9617316746455911 0.601764745712136 0.2311948886537375 0.26259738493165424 0.5319715501591336 1.1574233231085955 0.10380589097361102 0.052302522026411565 7.926518949467722e-11 10.100917497796386 -0.35996692893345505 PTLLANGGHGVEGSDTTGS(ph)PTEFLEEK ddPTM_A549_PD325901_60min_R1 1 PTLLANGGHGVEGSDTTGSPTEFLEEK 27 0 E7EVA0;A0A0J9YW37;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 PTLLANGGHGVEGS(0.031)DT(0.172)T(0.172)GS(0.622)PT(0.004)EFLEEK 103.99 7.0499e-13 2855500.0 3179.8 3025.0 2918.4 2733.7 3783.4 3273.5 3652.8 2953.3 3330.1 3260.6 3611.1 True False 3502.610955154961 3279.927366238425 3116.46017376485 2902.5544403168415 3517.6670360214334 3246.8417013254675 3791.809302888859 2894.3941146809702 3190.147477734693 3054.7251595425237 3166.9575926489388 1.1059860616021928 1.0356713881650037 0.9840549115651873 0.9165119378466503 1.110740176687731 1.02522424324909 1.1973034661690165 0.9139352296347018 1.0073224488826695 0.9645614348083075 1.0 11.62888183365601 PTNFTVVPVEAHADGGGDETAERTEAPGT(ph)PEGPEPERPSPGDGNPR ddPTM_A549_MK2206_60min_R1 1 PTNFTVVPVEAHADGGGDETAERTEAPGTPEGPEPERPSPGDGNPR 46 2 A0A0G2JNW7;Q9Y666;Q9Y666-2 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 PTNFTVVPVEAHADGGGDET(0.191)AERT(0.191)EAPGT(0.618)PEGPEPERPSPGDGNPR 141.58 6.0756e-41 13878000.0 648.51 607.22 846.23 568.27 1013.5 779.44 653.19 668.49 1462.5 1569.3 1542.6 True False 757.9626334527578 638.1249043536803 966.2381386651455 707.4961755106093 864.4154925753312 861.9198234496021 771.8661679716909 763.2505046647643 1131.246085132595 1214.794040073816 1159.529846405866 0.6536810033844105 0.5503307278649555 0.8333016538212822 0.6101577960270692 0.7454879193103262 0.743335608066709 0.6656716688787305 0.6582413613850234 0.9756075608049757 1.0476608634432736 1.0 10.179324240228196 -8.766041603306483 24.287115469027512 0.9884813890213353 0.6842969377087742 0.7965887213913879 0.07301283856532625 23.0873082192592 121837.31941066595 0.011523601382122516 0.012472263561388563 1.7137931265693497e-09 8.766041603306483 -0.3041844513125611 PTNFTVVPVEAHADGGGDETAERTEAPGT(ph)PEGPEPERPSPGDGNPR ddPTM_A549_PD325901_60min_R1 1 PTNFTVVPVEAHADGGGDETAERTEAPGTPEGPEPERPSPGDGNPR 46 2 A0A0G2JNW7;Q9Y666;Q9Y666-2 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 PTNFTVVPVEAHADGGGDET(0.059)AERT(0.059)EAPGT(0.876)PEGPEPERPS(0.005)PGDGNPR 90.428 8.647e-11 18640000.0 1634.1 1959.4 1494.3 1008.3 2555.9 1850.4 1898.1 1756.2 2009.1 2053.9 2198.5 True False 1799.99262903916 2124.525514514899 1595.7121839558722 1070.580400984552 2376.382401376323 1835.330955898164 1970.3332341801731 1721.1712132877517 1924.664513833451 1924.216403479233 1928.0984374397533 0.933558470919825 1.1018760625811064 0.8276092926431475 0.5552519416001052 1.232500558701675 0.9518865428547457 1.0219048965137392 0.8926780810907289 0.9982190102229106 0.9979865997061461 1.0 10.912962993688922 -6.787983411191976 24.99999944937575 1.0025253498028888 0.8703116398552113 0.2162081304637209 0.14354253994622074 299.07577309803236 281678.1922153358 0.020100507531024294 0.03799413384274149 1.6293582682803535e-07 6.787983411191976 -0.13221370994767745 PTS(ph)SPAKGPPQK ddPTM_A549_PD325901_60min_R1 1 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PT(0.019)S(0.897)S(0.084)PAKGPPQK 134.88 1.1337e-08 192390000.0 8716.2 7191.4 7988.5 7364.7 11342.0 6908.4 8888.7 8447.1 9836.0 8198.1 9101.3 True False 9601.062207472696 7797.444516220494 8530.647648752916 7819.600792552744 10545.377047775844 6852.140280872716 9226.964342583273 8278.615963878245 9422.627125611376 7680.470566903498 7981.897797894213 1.2028545654901335 0.9768910494290741 1.0687492955627012 0.979666865017454 1.321161622810797 0.8584600372458352 1.1559862799818776 1.0371738868997185 1.1804995959854632 0.9622361450092436 1.0 12.962516091021275 PTSS(ph)PAKGPPQK ddPTM_A549_MK2206_60min_R1 2 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PTS(0.03)S(0.97)PAKGPPQK;PT(0.003)S(0.193)S(0.804)PAKGPPQK 151.22 7.069e-13 287700000.0 15002.2 14238.5 16672.8 14627.7 22298.0 16381.0 17281.0 18978.1 21089.2 23044.0 22194.0 True False 17534.204591424907 14963.178832449325 19037.25374701469 18211.487156662417 19017.99373798198 18114.42654717224 20420.734011112825 21668.30379299371 16312.529872532186 17838.34439524693 16682.61727676117 1.0510463856201984 0.8969323328715921 1.1411431090931707 1.091644485666584 1.1399886134458037 1.0858264172016685 1.2240725584203647 1.2988551756310793 0.9778159866590889 1.069277326172056 1.0 14.026058025405897 PTSS(ph)PAKGPPQK ddPTM_A549_PD325901_60min_R1 3 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PT(0.004)S(0.11)S(0.886)PAKGPPQK;PT(0.022)S(0.268)S(0.71)PAKGPPQK;PT(0.003)S(0.102)S(0.895)PAKGPPQK 130.47 2.0162e-08 259709400.0 11373.7 9410.119999999999 10975.599999999999 9364.2 14294.5 10056.900000000001 11634.4 11051.4 12522.8 12049.0 13670.4 True False 12528.34965112459 10203.143837219008 11720.470217644419 9942.605366358766 13290.503633347887 9974.999940754575 12077.153458587965 10830.97115734442 11996.51026521006 11288.224083704798 11989.027463805503 1.0449846485836556 0.8510401588470773 0.9775997471878474 0.8293087488851935 1.1085556083236525 0.8320107674178565 1.0073505540835994 0.9034069852657174 1.000624137481305 0.9415462695188238 1.0 13.549427013276466 -8.79083148560291 23.670797626410835 1.0002947672467168 0.9422879138478139 0.020531136025005337 0.08627990509511849 188.46308441783228 151776.84352505833 0.012751559018566293 0.013576497122777328 1.6187080048420211e-09 8.79083148560291 -0.05800685339890299 PTTPLSVGTIVPPPRPAS(ph)RPK ddPTM_A549_PD325901_60min_R1 1 PTTPLSVGTIVPPPRPASRPK 21 2 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 PTTPLSVGTIVPPPRPAS(1)RPK 110.26 7.1258e-11 5525000.0 1084.1 1420.9 1367.3 1718.7 1848.6 2035.8 1579.7 1998.5 2084.3 1734.5 1622.2 True False 1194.1570339277614 1540.6442296489838 1460.0932002428303 1824.8601955490938 1718.7607133237889 2019.2211197673382 1639.8163479450084 1958.6383497070801 1996.704119348496 1624.9833739883777 1422.679683973058 0.8393716782353208 1.0829171506452466 1.0262979198278064 1.282692243452077 1.2081150329804935 1.4193083253486434 1.1526251245575967 1.3767247622720475 1.4034811502842186 1.142199043322496 1.0 10.474395160607575 -5.421054591978157 1.10200267749742 1.2262707090625062 0.7435197051259824 0.4707369031762664 0.12803591179242432 1.2317763679705103 1.4300503585662108 0.024894303166579465 0.6420209037990623 3.79267307062048e-06 5.421054591978157 -0.4827510039365238 PTVMGEPFTVNPALT(ph)PAKDK ddPTM_A549_MK2206_60min_R1 2 PTVMGEPFTVNPALTPAKDK 20 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 PTVMGEPFTVNPALT(1)PAKDK;PTVMGEPFTVNPALT(1)PAKDK 73.98100000000001 0.00016063 3459500.0 3554.7999999999997 4462.7 4829.4 3772.8 4964.1 4548.9 3523.0 3919.7 6033.1 6057.0 6064.5 True False 4154.763333484239 4689.832368267135 5514.281539143559 4697.136169367429 4233.887465903507 5030.261578684564 4163.083497549358 4475.329478577804 4666.612482880994 4688.719493230803 4558.517278314773 0.911428668538513 1.0288065355322966 1.2096656001229682 1.0304087672787985 0.9287860958747365 1.1034863468904497 0.913253859397106 0.9817511276895452 1.0237127991332706 1.0285624046080537 1.0 12.154348928553595 -6.521566102462424 24.999891025467274 1.0030805345189069 1.0598819404066586 0.07349492918204259 0.08014105241517876 89.26431697800732 1700071.5947934699 0.010771869289282676 0.02266878201039762 3.0090811321744797e-07 6.521566102462424 0.05680140588775173 PTVMGEPFTVNPALT(ph)PAKDK ddPTM_A549_PD325901_60min_R1 1 PTVMGEPFTVNPALTPAKDK 20 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 PTVMGEPFTVNPALT(1)PAKDK 81.312 6.9875e-05 2689800.0 1795.8 1857.6 2185.7 2103.0 2609.5 2522.8 2850.6 2222.4 2031.6 2526.1 2650.0 True False 1978.1082940019112 2014.1464712477673 2334.034745681822 2232.8975337404686 2426.2177222862865 2502.2551532316734 2959.081142908172 2178.072488560927 1946.2189170793094 2366.601614893078 2324.0667997340674 0.8511408941551324 0.8666474093938423 1.0042890100873587 0.9607716671465593 1.0439535225768501 1.0766709259467049 1.2732341184198175 0.9371815340291226 0.8374195256788689 1.0183018901022456 1.0 11.182435820814199 -3.531363620587561 13.67972636642208 0.9599700781232027 0.6024441186837225 0.0 0.12130627593967347 0.0 0.0 0.017441707555054847 0.0 0.0002941957397472824 3.531363620587561 -0.3575259594394802 PTWGARPAS(ph)PDRFAVSAEAENK ddPTM_A549_MK2206_60min_R1 2 PTWGARPASPDRFAVSAEAENK 22 2 G3V331;O15037 G3V331 KHNYN Protein KHNYN 1 PT(0.012)WGARPAS(0.988)PDRFAVSAEAENK;PT(0.018)WGARPAS(0.982)PDRFAVSAEAENK 114.98 1.3992000000000001e-15 12992500.0 3720.3 3527.5 3120.3 2916.0 5513.5 3490.6 3457.7 3231.2 6550.3 5835.7 6390.7 True False 4348.195687397717 3707.0346828292986 3562.8054595994618 3630.420130904213 4702.471453689283 3859.9729751272466 4085.919332806248 3689.2324951349847 5066.667508679683 4517.411316930331 4803.712815652772 0.905173946541774 0.7717019782594046 0.7416774474923133 0.7557529499004569 0.9789243516736478 0.8035394960642996 0.8505752715883403 0.7679960556996074 1.0547398862334316 0.9403999552617851 1.0 12.229934188449572 -8.765536664350593 24.999870752186535 1.025849402193341 0.8209398610854372 0.5318659109943917 0.07248779487140217 45.18203666213364 275680.6956019982 0.011739862928903241 0.012720647417346801 1.7157868524982465e-09 8.765536664350593 -0.20490954110790394 PTWGARPAS(ph)PDRFAVSAEAENK ddPTM_A549_PD325901_60min_R1 2 PTWGARPASPDRFAVSAEAENK 22 2 G3V331;O15037 G3V331 KHNYN Protein KHNYN 1 PT(0.004)WGARPAS(0.996)PDRFAVSAEAENK;PT(0.003)WGARPAS(0.997)PDRFAVSAEAENK 133.61 1.384e-22 19661400.0 4856.0 4315.700000000001 4584.6 5297.5 5129.0 6956.0 4646.0 5309.700000000001 7121.900000000001 6198.200000000001 7388.700000000001 True False 5348.977545201738 4679.39918495047 4895.738525439396 5624.714543504578 4768.756734089424 6899.352642254448 4822.806072388751 5203.793868120929 6822.591310074385 5806.844594208571 6479.936740828342 0.8254675561104272 0.7221365535047328 0.7555225801191331 0.868019977427366 0.7359264333620369 1.064725308008561 0.7442674620573908 0.8030624489484937 1.0528793077696372 0.896126741117888 1.0 12.661764013799964 -8.758780550783289 24.993444589315274 1.0249707913403212 0.8149327594498447 0.3453980861855762 0.09855592671410171 37.977004220903304 356989.81937600416 0.014975937858806632 0.016607141926490238 1.7426872316710572e-09 8.758780550783289 -0.21003803189047654 PTYGS(ph)SR ddPTM_A549_MK2206_60min_R1 1 PTYGSSR 7 0 P62995;H7BXF3;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 1 PTYGS(0.964)S(0.036)R 66.27 0.024516 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 PVDAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 PVDASPR 7 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 PVDAS(1)PR;PVDAS(1)PR 53.968 0.043608 6429800.0 2068.09 1651.46 1806.3899999999999 1836.3 2504.3 1858.7199999999998 1694.97 1888.77 2334.39 2125.56 2271.6400000000003 True False 2278.0409743526075 1790.6343299993744 1928.9824881054976 1949.7240804601145 2328.406607365988 1843.5832005766517 1759.4730108731735 1851.0970006385994 2236.2837063598977 1991.3517788496606 1992.2426811124149 1.1434555618899855 0.8988033169731773 0.9682467434280675 0.9786579210176548 1.1687364342911617 0.9253808374124604 0.8831619900296137 0.9291523659180901 1.122495631461533 0.9995528143879254 1.0 10.96017768182323 -8.756658889868886 24.9999080864053 1.057845158546233 0.9836590964211095 0.05330767812430215 0.09275694410590932 199.70993133125657 1044394.8357661614 0.016200240097263608 0.018078246086766094 1.7512216195275366e-09 8.756658889868886 -0.07418606212512346 PVEDIT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 PVEDITPPR 9 0 B3KTU7;F2Z2B9;Q9BSJ2-3;Q9BSJ2;Q9BSJ2-4 B3KTU7 TUBGCP2 Gamma-tubulin complex component 2 1 PVEDIT(1)PPR;PVEDIT(1)PPR 57.858999999999995 0.013356999999999999 17047800.0 2700.9 4067.1000000000004 2215.1 2910.2 2927.0 3337.6000000000004 2267.1000000000004 3166.6 2091.8 3259.5 3061.3999999999996 True False 3156.7458893348667 4274.098018011354 2529.234488209072 3623.199130643843 2496.4421773734553 3690.782616680428 2679.002724182276 3615.4752473057824 1618.0106399181961 2523.1766861789342 2301.1698896583152 1.3718004496415472 1.8573587448799727 1.0991081099990494 1.5745031024988019 1.0848578319196305 1.6038722882943888 1.1641916297540562 1.5711465996292082 0.7031252438986343 1.0964756220383116 1.0 11.168151782748124 -8.761585041301505 24.999999928573374 0.8598091283863906 1.412146949419998 0.4289255715606377 0.24402839771607712 2.0816779895708817 357259.4286789555 0.03860461029404832 0.04238961131941393 1.7314699500533378e-09 8.761585041301505 0.5523378210336075 PVGSTGVIKS(ph)PSWQRPNQGVPSTGR ddPTM_A549_MK2206_60min_R1 1 PVGSTGVIKSPSWQRPNQGVPSTGR 25 2 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;A0A0A0MSP3 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 PVGS(0.002)T(0.002)GVIKS(0.494)PS(0.491)WQRPNQGVPS(0.005)T(0.005)GR 51.9 0.0014665999999999998 8068700.0 2928.5 2426.8 2034.0 2499.3 3799.9 2483.0 2955.9 2634.8 3497.9 3239.6 3744.7 True False 3422.7592050491153 2550.3137542991194 2322.4517850287807 3111.628612197842 3240.9397436970917 2745.7494119179937 3492.9487682106574 3008.2909687365864 2705.6312349984964 2507.7721100000845 2814.787641537694 1.2159919826773473 0.9060412645928434 0.8250895203447907 1.1054576786822845 1.1513976030982551 0.9754730237546498 1.240927989261204 1.06874526672754 0.9612203759429729 0.8909276397952743 1.0 11.458810368581453 -8.757913667394709 24.85907959398971 0.9816873986543374 1.0557253395142818 0.12609469416907637 0.12165960407937892 177.80848973086663 1253687.293170225 0.020317247384167562 0.022587511417221838 1.7461692362082817e-09 8.757913667394709 0.07403794085994442 PVPDS(ph)PVSVTR ddPTM_A549_MK2206_60min_R1 2 PVPDSPVSVTR 11 0 G3XAC1;A0A0C4DFT5;Q9BXS9-5;Q9BXS9-7;Q9BXS9-4;Q9BXS9-2;Q9BXS9-3;Q9BXS9 G3XAC1 SLC26A6 Solute carrier family 26 member 6 1 PVPDS(0.998)PVS(0.002)VTR;PVPDS(1)PVSVTR 120.2 1.2492999999999999e-05 77267000.0 17125.5 15811.900000000001 16632.9 15128.400000000001 22492.6 16880.0 15936.3 15659.0 22564.0 23221.0 21630.0 True False 20015.865721723963 16616.65817191457 18991.69532704287 18834.858679139696 19183.968335767047 18666.230395962844 18831.719427191558 17878.71120367627 17453.29002730384 17975.359972315087 16258.674042369303 1.2310884435940843 1.022018039639172 1.168096197608209 1.1584498606747993 1.1799220702607465 1.1480782717778564 1.158256779004058 1.0996414072319323 1.073475609500592 1.1055858506955847 1.0 13.988921984410087 -9.14560113264944 0.7099037405822346 1.0123852203121437 1.1510196115280344 0.29600105086761186 0.05583231088450047 0.29524513192861246 0.3240973066538932 0.01474287511104033 0.011700656623477936 7.151528395227125e-10 9.14560113264944 0.13863439121589072 PVPDS(ph)PVSVTR ddPTM_A549_PD325901_60min_R1 2 PVPDSPVSVTR 11 0 G3XAC1;A0A0C4DFT5;Q9BXS9-5;Q9BXS9-7;Q9BXS9-4;Q9BXS9-2;Q9BXS9-3;Q9BXS9 G3XAC1 SLC26A6 Solute carrier family 26 member 6 1 PVPDS(0.998)PVS(0.002)VTR;PVPDS(0.995)PVS(0.005)VTR 122.46 8.4465e-06 109154000.0 24718.0 22713.0 27129.0 22513.0 34450.0 24018.0 25145.0 23690.0 27682.0 28744.0 26345.0 True False 27227.353163570137 24627.104221280428 28970.137079929602 23903.576879267315 32030.350846048117 23822.40537114253 26101.906734871947 23217.484365554534 26518.621806748095 26929.09893451828 23104.73201471472 1.1784318963851146 1.0658900612046118 1.2538616358536157 1.0345749461211597 1.3863112900703172 1.031061747696132 1.1297212500992617 1.0048800544740362 1.1477571689582537 1.1655231022531634 1.0 14.495900735737115 PVPTAQLS(ph)PTEISAVR ddPTM_A549_PD325901_60min_R1 1 PVPTAQLSPTEISAVR 16 0 A0A087X0N3;Q96MY1 A0A087X0N3 NOL4L Nucleolar protein 4-like 1 PVPT(0.032)AQLS(0.876)PT(0.091)EISAVR 76.15100000000001 0.00047226 2899800.0 2123.5 1788.8 2207.1 2312.6 2523.2 2596.7 2488.8 2384.1 2460.8 2662.2 2864.3 True False 2339.076156761923 1939.548453794145 2356.8870783704756 2455.44404970433 2345.9791365674464 2575.5533361331413 2583.512645923618 2336.5472552097312 2357.381133662515 2494.1082376661066 2512.009258293695 0.9311574585321241 0.772110392264876 0.9382477674351457 0.9774820859427137 0.9339054499189919 1.0252961160989547 1.0284646194650144 0.9301507339176178 0.9384444447723841 0.9928738237852882 1.0 11.29462606611686 -5.9514875454072875 8.15198196234659 0.9726318972189396 0.8516971390569978 0.5141836034945741 0.046904680458208295 0.1461970661752361 21.624652690216294 0.006245100685573327 0.019508072057255795 1.1181818910757902e-06 5.9514875454072875 -0.12093475816194177 PVS(ph)MPVDR ddPTM_A549_MK2206_60min_R1 1 PVSMPVDR 8 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 PVS(1)MPVDR 85.73100000000001 0.004461199999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 PVS(ph)SAASVYAGAGGSGSR ddPTM_A549_MK2206_60min_R1 3 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 PVS(0.386)S(0.386)AAS(0.227)VYAGAGGSGSR;PVS(0.421)S(0.421)AAS(0.158)VYAGAGGSGSR;PVS(0.333)S(0.333)AAS(0.333)VYAGAGGSGSR 220.78 8.5947e-57 286366000.0 45426.9 47608.0 47368.1 41144.2 68594.6 51279.1 46579.0 48196.6 82787.8 77964.9 75519.3 True False 53093.850138926304 50031.043849790854 54085.6088487816 51224.53084703331 58504.42520671712 56705.4203256883 55041.801371658126 55028.6156458971 64036.49548495059 60352.57494102527 56765.773583351765 0.9353144824313226 0.8813593243176365 0.9527855507749796 0.9023840883947085 1.0306285198564662 0.9989368019872953 0.9696300763141675 0.9693977932864085 1.1280828471565334 1.0631859856962371 1.0 15.792733711309829 -7.213269082487936 0.6797591516774486 1.0544629084592638 0.9074244717026391 0.501747740193881 0.04789278521385246 0.5111141132326451 0.44943426311149687 0.011892540471365232 0.035154630768003146 6.119711059200852e-08 7.213269082487936 -0.14703843675662476 PVS(ph)SAASVYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 1 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 PVS(0.382)S(0.382)AAS(0.237)VYAGAGGSGSR 243.86 9.659999999999998e-75 81058000.0 41389.0 45084.0 51753.0 51514.0 57023.0 50714.0 49262.0 55385.0 62529.0 59406.0 61935.0 True False 45590.78081102859 48883.38690231175 55265.26979607053 54695.90278321754 53017.901198670595 50301.0019981731 51136.692367200754 54280.302726308015 59901.123580454856 55655.09502170864 54317.38763831303 0.8393404541950195 0.8999583563888411 1.0174508053308682 1.0069685815419724 0.97607605048506 0.9260570912046782 0.9414424108115841 0.9993172552359854 1.1027983153262568 1.0246276089767627 1.0 15.729126475260971 -8.497023950072732 4.689119587335006 1.0488121580540017 0.9488361579572592 0.40937171783531934 0.0520133088856567 0.16297196056072902 8.980623840325086 0.010128638320673879 0.01199423289987223 3.1840219273710315e-09 8.497023950072732 -0.09997600009674257 PVSS(ph)AAS(ph)VYAGAGGSGSR ddPTM_A549_MK2206_60min_R1 2 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 PVS(0.169)S(0.832)AAS(0.993)VY(0.003)AGAGGS(0.002)GS(0.002)R;PVS(0.062)S(0.938)AAS(0.999)VY(0.001)AGAGGSGSR 82.709 0.00020834 8074900.0 3707.3999999999996 4680.9 4035.0 3724.2 5073.2 3804.1 4722.3 4685.1 5634.0 5296.9 5757.3 True False 4333.118482772437 4919.1378162595765 4607.223673840281 4636.62916718569 4326.9390004274 4206.647337042788 5580.280783558713 5349.227272516999 4357.907995649255 4100.326611143179 4327.603516603457 1.0012743695553026 1.1366886539828833 1.064613164344659 1.0714080320428183 0.9998464470754986 0.9720500782715876 1.2894621150364594 1.23607147743409 1.0070026006147583 0.9474820406748682 1.0 12.079352614041245 -8.945683402893538 24.999830910450537 1.0030885410668045 1.0966058649182449 0.21262556247759656 0.09389332878031076 120.8530403694383 55623.972873608895 0.01662238583929305 0.01769495491718546 1.1332261747578946e-09 8.945683402893538 0.0935173238514404 PVSS(ph)AASVYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 3 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 PVS(0.003)S(0.988)AAS(0.009)VYAGAGGSGSR;PVS(0.085)S(0.912)AAS(0.003)VYAGAGGSGSR;PVS(0.07)S(0.72)AAS(0.21)VYAGAGGSGSR 399.25 0.0 2430540000.0 100189.0 98643.0 121003.0 112110.0 130719.0 113504.0 119493.0 125988.0 132215.0 137378.0 130627.0 True False 110360.1135247566 106955.99179763859 129214.99123014926 119034.78007971667 121537.74839606864 112579.66105613136 124040.37150407885 123475.0705043263 126658.46334004776 128703.92963492378 114560.70711277823 0.9633330336911556 0.9336184673890565 1.1279171933090877 1.0390541668229578 1.0609025682463877 0.9827074561027574 1.0827479563474451 1.0778134459555353 1.105601270559198 1.1234561384840476 1.0 16.80575277704818 -5.739684905776158 24.999582125061128 1.0542912839151943 0.9484756576842175 0.48307176275781005 0.04571602258698924 170.68998713486857 196148.6229136345 0.006486127840889281 0.025076402388366576 1.8210215875288061e-06 5.739684905776158 -0.10581562623097684 PVSSAAS(ph)VYAGAGGSGSR ddPTM_A549_MK2206_60min_R1 10 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 PVSSAAS(1)VYAGAGGSGSR;PVSS(0.002)AAS(0.995)VYAGAGGS(0.001)GS(0.002)R;PVSSAAS(0.996)VYAGAGGS(0.002)GS(0.002)R;PVSSAAS(1)VYAGAGGSGSR;PVSSAAS(1)VYAGAGGSGSR;PVS(0.001)S(0.005)AAS(0.994)VYAGAGGSGSR;PVS(0.033)S(0.033)AAS(0.934)VYAGAGGSGSR;PVS(0.006)S(0.224)AAS(0.77)VYAGAGGSGSR;PVS(0.004)S(0.161)AAS(0.835)VYAGAGGSGSR;PVSSAAS(1)VYAGAGGSGSR 401.62 0.0 14618657800.0 135563.4 134117.18000000002 152574.79 126033.66000000002 217617.5 148993.3 141545.7 136869.1 257263.09999999995 238688.99999999997 223708.89999999997 True False 158443.18771308046 140943.171601208 174212.18947192296 156911.91235786618 185606.25402615944 164759.67211225154 167262.7214927824 156270.7140690395 198993.41861475224 184768.9891232904 168155.80607845544 0.9422403627214428 0.8381701166800569 1.0360164988334797 0.9331340737925917 1.1037754708247318 0.9798036473113549 0.994688945885958 0.9293209536644201 1.1833871411012065 1.0987963688692608 1.0 17.359439067490918 -6.178304423698246 0.4878272803514559 1.0735167187114556 0.8544758875832107 0.2593401056936552 0.07987147926381193 2.0802739052771875 0.5586052010849935 0.02033176432312081 0.2220029156664153 6.632779751098692e-07 6.178304423698246 -0.2190408311282449 PVSSAAS(ph)VYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 28 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 PVSS(0.001)AAS(0.996)VY(0.001)AGAGGS(0.001)GS(0.002)R;PVSSAAS(1)VYAGAGGSGSR;PVS(0.004)S(0.145)AAS(0.85)VYAGAGGSGSR;PVSS(0.002)AAS(0.997)VYAGAGGS(0.001)GS(0.001)R;PVSSAAS(1)VYAGAGGSGSR;PVS(0.012)S(0.011)AAS(0.94)VY(0.037)AGAGGSGSR;PVSSAAS(1)VYAGAGGSGSR;PVS(0.007)S(0.017)AAS(0.703)VY(0.272)AGAGGS(0.001)GS(0.001)R;PVSSAAS(1)VYAGAGGSGSR;PVSSAAS(0.998)VYAGAGGS(0.001)GS(0.001)R;PVSSAAS(1)VYAGAGGSGSR;PVS(0.089)S(0.089)AAS(0.821)VYAGAGGSGSR;PVS(0.017)S(0.12)AAS(0.861)VYAGAGGS(0.001)GS(0.001)R;PVS(0.007)S(0.001)AAS(0.394)VYAGAGGS(0.299)GS(0.299)R;PVSSAAS(1)VYAGAGGSGSR;PVSSAAS(1)VYAGAGGSGSR;PVS(0.001)S(0.014)AAS(0.985)VYAGAGGSGSR;PVS(0.001)S(0.031)AAS(0.968)VYAGAGGSGSR;PVSSAAS(0.833)VYAGAGGS(0.049)GS(0.118)R;PVSSAAS(0.999)VYAGAGGSGSR;PVS(0.004)S(0.018)AAS(0.968)VY(0.001)AGAGGS(0.007)GS(0.002)R;PVSSAAS(1)VYAGAGGSGSR;PVSS(0.001)AAS(0.998)VYAGAGGS(0.001)GS(0.001)R;PVSSAAS(1)VYAGAGGSGSR;PVS(0.002)S(0.002)AAS(0.992)VYAGAGGS(0.002)GS(0.002)R;PVSS(0.004)AAS(0.996)VYAGAGGSGSR;PVSSAAS(1)VYAGAGGSGSR;PVS(0.06)S(0.06)AAS(0.88)VYAGAGGSGSR 392.74 2.0922999999999988e-303 14362473500.0 273626.32 278104.0 319049.03 316165.69999999995 345224.8 318792.43 316902.8 339082.0 382817.3 375185.39999999997 362093.10000000003 True False 301404.6625733493 301540.80008607305 340701.6157734735 335694.5372245973 320977.4010089049 316196.2901453735 328962.7094698659 332318.74350531615 366728.8201640206 351496.12981445866 317557.94419727835 0.9491328057789226 0.9495615071079598 1.0728801530526897 1.0571127044960709 1.0107679775427134 0.9957121083670357 1.0359139661941585 1.0464822234107545 1.1548406420473472 1.1068724188367232 1.0 18.276660336176146 -8.202252466641854 2.732949877089794 1.0736438136779767 1.0096024640731613 0.306528805511607 0.04997103252866053 0.38905109206186667 5.735514128045126 0.010987738130163115 0.014265367571505063 6.276933583086993e-09 8.202252466641854 -0.06404134960481533 PVSSAASVY(ph)AGAGGSGSR ddPTM_A549_PD325901_60min_R1 1 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 PVSS(0.001)AAS(0.054)VY(0.943)AGAGGS(0.001)GSR 61.821000000000005 0.0012441 6965700.0 1508.3 1852.1 1978.8 2286.8 2623.3 2133.8 1603.9 1789.2 2508.7 1893.8 2223.6 True False 1661.421505648227 2008.1829669455155 2113.0932674910505 2428.0504423003813 2439.048457893701 2116.423040259135 1664.9372921877566 1753.5130023997522 2403.2680632392503 1774.2251448020702 1950.1112965617642 0.8519624026472102 1.0297786441656624 1.0835757278144276 1.2450830096627152 1.250722695773303 1.0852832061383342 0.8537652672045964 0.8991861159367499 1.2323748226454796 0.909807121229543 1.0 10.929340748337335 -5.299740251648841 2.387635618481813 1.0958928437589692 0.807128122302463 0.12578413843884473 0.13693626279063587 0.6430880790678881 4.663969766837119 0.019858464592556312 0.36797548948416353 5.014870797026031e-06 5.299740251648841 -0.2887647214565062 PVSSAASVYAGAGGSGSR ddPTM_A549_MK2206_60min_R1 3 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;; 249.66 5.9692999999999984e-86 32215400.0 8246.6 7876.9 8940.0 7994.7 11480.1 9214.0 8301.7 8566.9 14889.7 12565.8 13764.699999999999 False True 9638.42446998737 8277.800565039857 10207.826429772515 9953.40185889572 9791.392497596515 10189.019364241809 9810.011431054649 9781.284310030922 11517.206723964988 9727.177052672887 10346.545103606126 0.9315597016658295 0.8000545575503034 0.9865927541566254 0.9620024616165467 0.9463441563874185 0.9847750396111051 0.9481436878514667 0.9453671937912694 1.113145171517287 0.9401376938165216 1.0 13.336861486019423 -8.691182433737774 8.753078257793833 1.053373632414221 0.9378085462129548 0.18720100390524141 0.062994605982011 0.20309902753579795 23.131304268121813 0.010401129836361453 0.01178671678699402 2.036186558760629e-09 8.691182433737774 -0.11556508620126626 PVSSAASVYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 4 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 256.57 2.4949999999999993e-86 48243200.0 15044.9 13237.6 16122.3 14442.8 17991.8 17268.899999999998 16514.9 16605.0 19316.9 18127.1 19246.7 False True 16572.24717253 14353.179009361245 17216.456229265703 15334.89895402132 16728.118036340435 17128.267803885556 17143.38355680004 16273.800248629508 18505.07786932925 16982.55181240976 16879.477914883642 0.9817985636817155 0.8503331134848189 1.019963787747542 0.9084936768393544 0.9910329052055724 1.0147391933717653 1.0156347040617706 0.9641175118502882 1.0963062935146957 1.0061064624182028 1.0 14.042982661482188 -7.2059296872425245 0.8293224426885784 1.0408172205683315 0.931476080857502 0.274096921890709 0.05173552532978024 0.47291825016830297 0.6337096714593362 0.009645681362944433 0.025394860614009165 6.224010444306437e-08 7.2059296872425245 -0.10934113971082948 PVSVAGSPLS(ph)PGPVR ddPTM_A549_MK2206_60min_R1 1 PVSVAGSPLSPGPVR 15 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVSVAGS(0.086)PLS(0.914)PGPVR 123.81 2.9148e-07 34709000.0 4536.7 4811.4 4526.8 4230.6 6157.6 4488.3 3399.0 4350.3 6428.1 6384.0 6704.3 True False 5302.38404833407 5056.279708849015 5168.768308981459 5267.097189918852 5251.825196923398 4963.248926907584 4016.5543026313544 4966.968347235001 4972.145613566382 4941.849966119439 5039.437280733075 1.0521778033841798 1.0033421247607015 1.025663783681334 1.0451756607937503 1.0421451650965736 0.9848815751479285 0.7970243657932927 0.9856196377767932 0.9866469878643069 0.9806352754926162 1.0 12.299046931557918 -7.312650257231279 6.749511423085069 0.9758276721284342 1.0321771605405223 0.29159148347506303 0.05591495695179676 0.331178726690988 35.98297745931451 0.008914200077032195 0.014349821000826398 4.867990732540527e-08 7.312650257231279 0.05634948841208809 PVSVAGSPLS(ph)PGPVR ddPTM_A549_PD325901_60min_R1 1 PVSVAGSPLSPGPVR 15 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVSVAGS(0.001)PLS(0.999)PGPVR 142.17 1.0095e-30 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 PVSVAGSPLS(ph)PGPVRAPLSR ddPTM_A549_MK2206_60min_R1 2 PVSVAGSPLSPGPVRAPLSR 20 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVSVAGS(0.454)PLS(0.546)PGPVRAPLSR;PVSVAGSPLS(1)PGPVRAPLSR 134.81 1.451e-17 16305300.0 4184.7 5612.5 5415.0 4413.0 6175.0 4589.3 3664.1 3970.8 7380.2 7029.799999999999 6483.5 True False 4890.9750539078095 5898.152277074257 6182.928424744765 5494.185198107101 5266.66567997304 5074.9366798692145 4329.819541121373 4533.673060064992 5708.596483757656 5441.763297591864 4873.468014503065 1.0035923164679945 1.210257717814462 1.2686917009293683 1.1273666271650558 1.080681285749665 1.0413398969207541 0.8884473086180444 0.930276560053976 1.1713622551270086 1.1166100365073899 1.0 12.250733060399929 -6.732015049427544 3.0877588942577505 1.0523481318363748 1.1691515393298797 0.25172367015002717 0.0966040705318656 0.33230094846087804 6.505511607745061 0.015986353871584376 0.03435226326809862 1.8534673948608558e-07 6.732015049427544 0.11680340749350493 PVSVAGSPLS(ph)PGPVRAPLSR ddPTM_A549_PD325901_60min_R1 2 PVSVAGSPLSPGPVRAPLSR 20 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVSVAGS(0.001)PLS(0.999)PGPVRAPLSR;PVSVAGS(0.001)PLS(0.999)PGPVRAPLSR 144.22 1.8529000000000003e-21 20442800.0 3621.0 3510.3 5503.1 4885.1 5031.6 6010.1 5633.1 5823.9 5560.700000000001 6045.5 5547.700000000001 True False 3988.6012543606903 3806.1253003989223 5876.573458828587 5186.841532132935 4678.197774077667 5961.155738242307 5847.470703050594 5707.737745738832 5327.003116855145 5663.786098268514 4865.368069767808 0.8197943500194508 0.7822892833225181 1.20783738754405 1.066073821703785 0.9615300850817082 1.2252219467800292 1.2018557731295456 1.1731358581492117 1.0948818343170834 1.164102287237399 1.0 12.248333235062598 -5.747230761759423 24.99433479418853 1.080710917869368 0.8010416165479263 0.6322573004489161 0.08997671442974742 128.4330246848772 225922.13730172222 0.013124567779645366 0.05034412703709286 1.789654670871672e-06 5.747230761759423 -0.27966930132144163 PVVDGEEGEPHSIS(ph)PR ddPTM_A549_MK2206_60min_R1 1 PVVDGEEGEPHSISPR 16 0 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 PVVDGEEGEPHS(0.068)IS(0.932)PR 41.239 0.030994999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 PY(ph)ETIT(ph)PK ddPTM_A549_PD325901_60min_R1 1 PYETITPK 8 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 2 PY(0.558)ET(0.471)IT(0.971)PK 50.909 0.02337 8728500.0 4609.6 4939.4 4887.0 5245.0 5190.4 5732.4 5303.9 5540.6 5731.5 5638.6 5671.4 True False 5077.563198591834 5355.660572825808 5218.661207918318 5568.9717377407305 4825.844209907929 5685.717234971165 5505.742816905442 5430.088386483389 5490.62498682814 5282.577833710505 4973.853753966711 1.0208509236007217 1.0767627754544655 1.0492188685194794 1.1196492726187224 0.97024248170933 1.1431211121631257 1.106937012877498 1.0917265876892388 1.1038975527676698 1.0620693922690394 1.0 12.280148373332953 -2.018735247336747 23.80912849772063 1.0612256053639368 0.005325719881194457 0.0 0.051348924530055136 0.0 0.0 0.007255320977712548 0.0 0.009577777695691124 2.018735247336747 -1.0558998854827424 PY(ph)T(ph)ERPSR ddPTM_A549_MK2206_60min_R1 1 PYTERPSR 8 1 Q96ID5 Q96ID5 IGSF21 Immunoglobulin superfamily member 21 2 PY(0.999)T(0.995)ERPS(0.005)R 45.161 0.025125 101050000.0 282.74 0.0 0.0 0.0 153.85 268.83 188.99 0.0 165.78 142.95 0.0 True False 330.45959967067995 0.0 0.0 0.0 131.2188688038626 297.2774121650884 223.32703667381585 0.0 128.23109469626087 110.65749571691323 0.0 0.0 PY(ph)T(ph)ERPSR ddPTM_A549_PD325901_60min_R1 2 PYTERPSR 8 1 Q96ID5 Q96ID5 IGSF21 Immunoglobulin superfamily member 21 2 PY(1)T(0.998)ERPS(0.002)R;PY(1)T(0.998)ERPS(0.002)R 57.96 0.007487899999999999 474620000.0 447.31 835.13 784.56 805.4300000000001 695.72 626.06 736.54 921.48 697.04 1085.6599999999999 1195.72 True False 492.7205819077825 905.5093359889903 837.8049595425407 855.179581835752 646.8550273037035 620.9615749295314 764.5694327501527 903.1003585129241 667.7458328218946 1017.1112423201054 1048.6540202935928 0.46986000375017395 0.8634967477028066 0.7989336266578938 0.8155021249013343 0.6168431291786807 0.5921510459242603 0.729095982043816 0.8611995386811011 0.6367646715691273 0.969920700857413 1.0 10.03432305643986 -10.881080665144546 0.9442248867634757 1.0136905735592716 0.7122085810309967 0.44870485964874585 0.11765483233003171 0.4634103284501361 0.6761052754539523 0.10149931939249916 0.020310487492557327 1.3149805671751157e-11 10.881080665144546 -0.3014819925282749 PYHPPPLFPPS(ph)PQPPDSTPR ddPTM_A549_MK2206_60min_R1 2 PYHPPPLFPPSPQPPDSTPR 20 0 P54259 P54259 ATN1 Atrophin-1 1 PYHPPPLFPPS(1)PQPPDSTPR;PYHPPPLFPPS(0.992)PQPPDS(0.003)T(0.004)PR 98.21 2.4688e-07 22481000.0 9691.900000000001 10390.2 10272.7 9332.2 12218.8 11117.1 10461.400000000001 10395.0 13416.7 13504.8 14035.7 True False 11327.655775794949 10919.016799867612 11729.523329432226 11618.589418938385 10421.430706146486 12293.504143066262 12362.100965445032 11868.523083352366 10377.83887206734 10454.056300509059 10550.248324386625 1.0736861756714642 1.0349535351342005 1.111776990340572 1.1012621752307306 0.987790086614134 1.1652336291127998 1.1717355445435684 1.1249520123539256 0.9836582564676923 0.9908824872249481 1.0 13.364989336031188 -8.768244128629023 24.99230198214769 0.9922830575489812 1.0962307483823093 0.46421981996378336 0.05019301176260012 102.60803724004477 376855.2773987832 0.008972022516930082 0.0096560983354106 1.7051236236262295e-09 8.768244128629023 0.10394769083332811 PYHPPPLFPPS(ph)PQPPDSTPR ddPTM_A549_PD325901_60min_R1 2 PYHPPPLFPPSPQPPDSTPR 20 0 P54259 P54259 ATN1 Atrophin-1 1 PYHPPPLFPPS(1)PQPPDSTPR;PYHPPPLFPPS(1)PQPPDSTPR 113.42 1.116e-11 35550000.0 10515.3 11251.9 12516.5 12127.4 14302.5 12958.2 12827.0 14001.5 13047.400000000001 13538.3 13954.6 True False 11582.80551504528 12200.137101546488 13365.944957828864 12876.481954676245 13297.941740946388 12852.672715477513 13315.13850420373 13722.229098535734 12499.063151555709 12683.48942753927 12238.272665497736 0.9464412038881634 0.9968839096011678 1.0921430926694642 1.0521486411213696 1.0865864901372955 1.0502031672910752 1.087991652755205 1.1212553824872347 1.0213094194896635 1.036379052355705 1.0 13.579112327059079 -4.252604269550879 16.11954064512039 1.0319373898040578 1.0431330079300536 0.0 0.050600208058267 0.0 0.0 0.007195156213762014 0.0 5.5897930638892396e-05 4.252604269550879 0.011195618125995788 PYPKPAPSS(ph)GKDYV ddPTM_A549_PD325901_60min_R1 2 PYPKPAPSSGKDYV 14 2 O95832 O95832 CLDN1 Claudin-1 1 PYPKPAPS(0.161)S(0.839)GKDYV;PYPKPAPS(0.05)S(0.95)GKDYV 74.77199999999999 0.00029598 10385400.0 7815.7 7354.799999999999 7682.9 7433.599999999999 11010.0 8836.1 8679.6 9236.400000000001 8953.7 8683.599999999999 8521.0 True False 8609.144110385756 7974.614807672841 8204.307795030823 7892.756589069499 10236.695582438013 8764.141731199617 9009.906927659358 9052.172756184376 8577.407126330478 8135.316014047552 7472.971019069429 1.1520376686082492 1.0671277577985148 1.0978642596224686 1.0561738522642288 1.3698294234403088 1.1727787661474127 1.2056659800590686 1.2113218066931026 1.1477907654723623 1.088632083984798 1.0 12.867466212056883 -10.308682059019928 0.8278797331374039 1.0052046243005064 1.1646171880868652 0.21003650927972817 0.08464786665645475 0.5195832305873165 0.6780440778633081 0.04640014320991089 0.016434144752324662 4.9126739459832437e-11 10.308682059019928 0.15941256378635882 PYPS(ph)PGAVLR ddPTM_A549_MK2206_60min_R1 2 PYPSPGAVLR 10 0 H7C053;O60828-5;O60828-4;O60828-2;O60828 H7C053 PQBP1 Polyglutamine-binding protein 1 1 PY(0.001)PS(0.999)PGAVLR;PYPS(1)PGAVLR 64.297 0.006120399999999999 4128300.0 1264.65 1313.49 1179.83 1038.08 1353.99 1253.1599999999999 1520.25 1743.21 1944.81 1787.81 1800.6399999999999 True False 1478.0920022760322 1380.3410306306048 1347.1476349707498 1292.4096466011815 1154.8198646197077 1385.7685594197155 1796.4597465652616 1990.3153558567265 1504.3136402233984 1383.94247931203 1353.4913928641636 1.0920586640364203 1.0198373169626325 0.9953130415702242 0.9548709754749714 0.853215521508385 1.023847337874273 1.327278293778965 1.4705046270334683 1.1114319959139713 1.0224981751700895 1.0 10.402469997843578 -7.535179038152663 24.968200972253463 1.113494670381959 0.9796485090307757 0.26213813880552317 0.1431531256025678 362.5477874181081 735928.4959228669 0.025358550767494485 0.03762718137420176 2.9162245508935457e-08 7.535179038152663 -0.13384616135118332 PYPS(ph)PGAVLR ddPTM_A549_PD325901_60min_R1 2 PYPSPGAVLR 10 0 H7C053;O60828-5;O60828-4;O60828-2;O60828 H7C053 PQBP1 Polyglutamine-binding protein 1 1 PYPS(1)PGAVLR;PYPS(1)PGAVLR 77.66199999999999 0.0013862 8076700.0 1472.55 2192.69 2102.04 1721.0300000000002 2161.0699999999997 1667.3400000000001 1645.46 1570.6599999999999 1919.8400000000001 1937.68 2009.54 True False 1622.0421919659848 2377.4756815462247 2244.6970749933757 1827.3341143572795 2009.2838984867672 1653.7617358448147 1708.0788807302615 1539.3319541410665 1839.1558012234389 1815.3345541134618 1762.3793195236208 0.9203706455227982 1.3490147411562157 1.2736742028952812 1.0368563078981297 1.1400972970052132 0.9383687822050897 0.9691891307439781 0.8734396375901387 1.0435641072550552 1.0300475805652072 1.0 10.783308755741933 -6.755847618244732 1.738876270081714 1.0012772076089553 1.1872184348592028 0.31403183444083227 0.11648473656730268 0.3081113205403602 1.8865716258596592 0.0165520379032373 0.04032255362342598 1.7544959973014926e-07 6.755847618244732 0.18594122725024742 PYQYPALT(ph)PEQK ddPTM_A549_MK2206_60min_R1 2 PYQYPALTPEQK 12 0 H3BQN4;J3KPS3;P04075;H3BUH7;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 PYQYPALT(1)PEQK;PYQY(0.011)PALT(0.989)PEQK 145.81 7.6965e-12 10193000.0 4756.0 5626.0 6121.799999999999 4898.0 7924.799999999999 6432.1 6447.0 6120.6 9625.7 6910.3 8330.0 True False 5558.696526963837 5912.339369411095 6989.963292816711 6098.0102198795785 6759.072417919084 7112.7405527175715 7618.3364486803075 6988.213793551373 7445.494319084319 5349.258430588214 6261.431103695619 0.8877677379030787 0.9442472929106441 1.1163523445448595 0.9739003941575615 1.079477248249166 1.1359608426449814 1.2167085004231408 1.1160729356946517 1.18910424722071 0.8543188197712464 1.0 12.612276719813655 -5.196934083854253 0.8156403246924987 1.1035791902356074 0.7270798164472191 0.2394695331390745 0.10120238763468985 2.0320817128797253 0.9043888968914533 0.013427452614692735 0.7063278763361278 6.3542736813247076e-06 5.196934083854253 -0.37649937378838827 PYQYPALT(ph)PEQK ddPTM_A549_PD325901_60min_R1 2 PYQYPALTPEQK 12 0 H3BQN4;J3KPS3;P04075;H3BUH7;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 PYQY(0.002)PALT(0.998)PEQK;PYQY(0.002)PALT(0.998)PEQK 83.617 0.00058286 4878800.0 4072.2 3619.4 4187.1 3880.6000000000004 4842.5 4447.4 4047.9 4468.2 4659.0 4611.200000000001 5117.7 True False 4485.606746204802 3924.4195402854057 4471.261785077716 4120.295848517957 4502.379505718083 4411.1818489307725 4201.9450495958745 4379.078245764908 4463.1984321089285 4320.048045047683 4488.255343773224 0.9994098826012436 0.874375283868362 0.9962137718570125 0.9180172545740395 1.0031469158644137 0.9828277384107882 0.936209000547493 0.9756749361063465 0.9944172267963635 0.9625227876219425 1.0 12.131939040091014 -7.9038205934662935 0.3802453079861718 1.0027160036003295 0.942340887080303 0.03253308557613899 0.03903044487496493 1.3339698327873364 0.44228872364314104 0.015000249275057775 0.029252104805970763 1.2478989133364597e-08 7.9038205934662935 -0.060375116520026584 QAAES(ph)YYR ddPTM_A549_MK2206_60min_R1 1 QAAESYYR 8 0 Q8TE82 Q8TE82 SH3TC1 SH3 domain and tetratricopeptide repeat-containing protein 1 1 QAAES(0.606)Y(0.393)Y(0.001)R 55.441 0.02086 11321000.0 5623.8 5416.2 4607.6 4168.4 6932.5 5636.2 4836.9 4718.9 7249.2 8458.2 8563.7 True False 6572.959951290838 5691.861445539345 5261.026963961954 5189.658187126588 5912.738433427223 6232.618942993234 5715.702120152283 5387.818526025152 5607.267774593646 6547.486745524976 6437.096943903742 1.0211062546627896 0.8842280138300275 0.8172980785918431 0.8062109724852689 0.9185411506077886 0.9682344381803728 0.887931651482326 0.8369950884657237 0.8710864266078848 1.017149004059319 1.0 12.65219448093491 -10.711401705676446 0.9279412706902299 1.0012708487877613 0.8865965720184922 0.35454416983959414 0.060664587219125356 0.5751565939773376 0.8656973254020136 0.04453065735071483 0.011116665236641014 1.9435615303625114e-11 10.711401705676446 -0.11467427676926911 QAAKPPDLNPETEES(ph)IPSRSSPEGPDPPVLTEVSK ddPTM_A549_MK2206_60min_R1 2 QAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSK 35 2 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 QAAKPPDLNPET(0.012)EES(0.246)IPS(0.246)RS(0.246)S(0.246)PEGPDPPVLT(0.003)EVSK;QAAKPPDLNPET(0.078)EES(0.23)IPS(0.23)RS(0.23)S(0.23)PEGPDPPVLT(0.003)EVS(0.001)K 68.32600000000001 9.4121e-05 12227600.0 1116.97 1259.42 1724.52 943.03 1611.8400000000001 1291.02 1354.77 1279.81 1998.47 1903.67 2016.1599999999999 True False 1305.4872287053815 1323.5190985822476 1969.0828674128963 1174.0723923342255 1374.7404711915376 1427.6348794902808 1600.9141725730753 1461.2269867537466 1545.8197359008113 1473.6296248437654 1515.4918288147603 0.861428088151673 0.8733264498148754 1.2993028599519945 0.7747137727904788 0.9071249643534522 0.9420274344908933 1.056366086661861 0.9641932466878074 1.0200119238582566 0.9723771496651786 1.0 10.565570358123686 -7.730992799646018 24.248632932605183 1.00877468700889 0.9467380866701023 0.05133901302308874 0.12574622438391797 367.4365970724248 292636.9366248119 0.01821815853769907 0.027019896604242758 1.8578352566817566e-08 7.730992799646018 -0.06203660033878777 QAAKPPDLNPETEESIPS(ph)RSSPEGPDPPVLTEVSK ddPTM_A549_MK2206_60min_R1 1 QAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSK 35 2 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 QAAKPPDLNPET(0.038)EES(0.21)IPS(0.251)RS(0.251)S(0.251)PEGPDPPVLTEVSK 84.969 6.1521e-07 7472400.0 990.17 1250.9 1299.3 983.74 1029.5 1333.8 1114.8 860.0 1317.5 1518.9 1510.2 True False 1157.286488667741 1314.5654669741095 1483.560277427677 1224.7563441617665 878.0619137704034 1474.9418306952164 1317.3447297950672 981.9076336395414 1019.0883536151753 1175.7794350781357 1135.1756606003742 1.0194778912504807 1.1580282352766966 1.3068993010676853 1.0789134991795144 0.7735031187208613 1.299307130946717 1.1604765460689557 0.8649829869680503 0.8977362614312904 1.0357687148227677 1.0 10.148699846555518 -8.254355457584055 24.614693569394966 0.943855041239104 1.1156334049880343 0.23590839306380684 0.1419738818240924 488.8044136712008 1698461.9025647037 0.022745607799135006 0.02904685728767838 5.567298949457425e-09 8.254355457584055 0.1717783637489303 QAAKPPDLNPETEESIPS(ph)RSSPEGPDPPVLTEVSK ddPTM_A549_PD325901_60min_R1 1 QAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSK 35 2 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 QAAKPPDLNPET(0.001)EES(0.011)IPS(0.376)RS(0.306)S(0.306)PEGPDPPVLTEVSK 115.82 2.2741999999999995e-21 15975000.0 2269.2 2199.0 1829.1 1881.5 2345.8 1759.5 2104.9 2640.7 1906.8 2248.7 2078.5 True False 2499.567513503253 2384.3174473911727 1953.2337252718228 1997.7159818034681 2181.0391005706724 1745.1712153603664 2185.003121345475 2588.029166910926 1826.663827075617 2106.716698234457 1822.8576766970784 1.3712356951708577 1.3080107557883671 1.0715228897140114 1.0959253743952317 1.1964944539842517 0.9573820477978974 1.1986690728947007 1.4197648011666484 1.002088012919053 1.15572198815418 1.0 10.831986209100647 -2.000000000000003 0.1350822689858105 0.9393002148396734 2.1689737855862354 0.07342966194176881 0.14228665749536 64.33087074390554 0.55924085822153 0.34584521411571967 15.28514201220025 0.009999999999999929 2.000000000000003 1.229673570746562 QAAKPPDLNPETEESIPSRS(ph)SPEGPDPPVLTEVSK ddPTM_A549_MK2206_60min_R1 1 QAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSK 35 2 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 QAAKPPDLNPET(0.001)EES(0.014)IPS(0.08)RS(0.453)S(0.453)PEGPDPPVLTEVSK 97.43700000000001 4.0992e-10 7027600.0 1107.7 1568.3 1260.2 1219.2 1923.4 1405.3 1149.9 1269.0 2176.6 1963.7 1993.5 True False 1294.6526793351225 1648.1197712490964 1438.9153094853834 1517.904054731968 1640.4704079125727 1554.0079132373578 1358.8219454533091 1448.8846361495098 1683.6035753159683 1520.0988061511198 1498.4589321989447 0.863989430417861 1.0998765036760325 0.9602634270221989 1.01297674705338 1.0947716835357177 1.0370707397078254 0.9068129371148514 0.9669164800021005 1.1235567015809564 1.0144414194391163 1.0 10.549263829558075 -8.739161684550604 24.989935626398733 1.0583462401093824 0.9979935323887704 0.08425338812222005 0.0736961563186813 390.3417552852906 437864.49637785804 0.013031027255552797 0.014769861702339588 1.823216806127433e-09 8.739161684550604 -0.060352707720611964 QAAKPPDLNPETEESIPSRS(ph)SPEGPDPPVLTEVSK ddPTM_A549_PD325901_60min_R1 1 QAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSK 35 2 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 QAAKPPDLNPET(0.004)EES(0.078)IPS(0.095)RS(0.412)S(0.412)PEGPDPPVLTEVSK 115.82 2.2741999999999995e-21 20929000.0 1873.2 1801.1 1797.2 1665.3 2339.5 1775.2 2011.6 1753.4 1892.1 1591.8 1951.8 True False 2063.365885023044 1952.8850179610006 1919.16879944154 1768.1617988292917 2175.1815908368512 1760.7433597656848 2088.1525387897577 1718.42706148431 1812.58161695499 1491.2934763417134 1711.7409734796051 1.2054194629860733 1.14087648085633 1.1211794478111243 1.0329610766020252 1.2707422586345936 1.028627220499646 1.2198998394862208 1.0039060162187468 1.0589111583105926 0.8712144532652222 1.0 10.7412486893512 -8.610853048017082 0.5888248892845562 1.0107642440639915 1.1480261333787225 0.4027290520411878 0.08645884863713078 0.5503810864464805 0.4181894290099392 0.021400517177575337 0.023439397173992755 2.4498920702324684e-09 8.610853048017082 0.13726188931473104 QAAS(ph)PLEPK ddPTM_A549_MK2206_60min_R1 2 QAASPLEPK 9 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QAAS(1)PLEPK;QAAS(1)PLEPK 129.84 5.0013000000000004e-05 11309300.0 4801.3 5215.0 3959.3 4920.5 6756.0 5130.7 4923.6 5593.4 7261.7 6237.200000000001 6314.4 True False 5611.642059485164 5480.421224934029 4520.788275547913 6126.022720889637 5762.201349619083 5673.62726851698 5818.154387889308 6386.281579069082 5616.936544552042 4828.212188076469 4746.360211425642 1.182304294136079 1.1546576704695366 0.9524747541632592 1.2906780033556686 1.2140252936867422 1.1953638189657794 1.2258139139721418 1.345511359145425 1.1834197773339477 1.017245209593193 1.0 12.212605878560428 -10.395402136101499 0.9404506027745541 1.008868350717491 1.1918312956115396 0.3666427441578355 0.0929684727018797 0.44863857394358564 0.7597962222824424 0.04902149633502425 0.017785389519366524 4.023443100325582e-11 10.395402136101499 0.18296294489404863 QAAS(ph)PLEPK ddPTM_A549_PD325901_60min_R1 1 QAASPLEPK 9 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QAAS(1)PLEPK 106.49 0.00052472 25558000.0 13057.0 14298.0 13099.0 12716.0 14354.0 13435.0 13462.0 13832.0 11716.0 14399.0 13703.0 True False 14382.537027944632 15502.942638835359 13987.976910685918 13501.438439868665 13345.824558611748 13325.58981436006 13974.30377668905 13556.109909005914 11223.617263487484 13489.84468265128 12017.617870473938 1.1967876814656473 1.2900179391561875 1.1639558739051732 1.1234704402642326 1.1105216277013665 1.10883787103097 1.1628181164773503 1.1280197169783452 0.9339302833935806 1.122505710203555 1.0 13.552863333249038 -8.675799215931315 5.02130201820036 0.9689060550549348 1.1626016814486915 0.4229250020251544 0.06788662498520945 0.08178462694481987 3.5660933780675763 0.009732535919924975 0.010990858168319854 2.109603241353516e-09 8.675799215931315 0.1936956263937567 QAAS(ph)PLEPKELEELR ddPTM_A549_PD325901_60min_R1 2 QAASPLEPKELEELR 15 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QAAS(1)PLEPKELEELR;QAAS(1)PLEPKELEELR 119.38 1.8919000000000002e-07 19655100.0 3430.7 3435.0 3455.3 3165.3 4520.200000000001 3387.3 4114.7 4230.0 3963.1000000000004 4378.7 4260.3 True False 3778.982138452144 3724.4795051335504 3689.7974364068264 3360.8133920821224 4202.716745843442 3359.7149518557358 4271.287160150235 4145.629331629193 3796.5446890514886 4102.228134726385 3736.31010826681 1.011420901624552 0.9968336131663473 0.9875511746851334 0.8995006556458259 1.1248308154466835 0.8992066649987551 1.14318325737999 1.1095517265702168 1.0161214082983654 1.097935668040498 1.0 11.867398486254556 -7.729740938364807 24.99999583850576 1.026317028278573 0.9893977209434115 0.13280356313441377 0.07484122454570101 494.01637442943104 389621.3136745385 0.01081287322420287 0.0160372239319063 1.8631982243335362e-08 7.729740938364807 -0.036919307335161466 QAASSLQQASLK ddPTM_A549_PD325901_60min_R1 2 QAASSLQQASLK 12 0 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 188.91 4.8966e-19 5630700.0 5525.9 5102.9 4799.5 4876.6 6067.0 4800.9 5485.4 5731.9 5555.8 6370.0 5907.6 False True 6086.885300047423 5532.939291629107 5125.222931738076 5177.8165064378345 5640.874850013753 4761.80306213332 5694.149898726053 5617.572757911439 5322.309046814936 5967.797112889003 5181.002651361876 1.1748469764722909 1.0679282880070948 0.9892337982862955 0.9993850331415669 1.0887612359223546 0.9190890996517121 1.0990440040074658 1.0842636331087008 1.0272739477205086 1.151861428080974 1.0 12.339015606544937 -5.3444603116128055 2.9385900044696025 1.0204161822843352 1.1875522245649002 0.22533469394195738 0.06365214163962311 0.21092197165997606 2.7862765348714373 0.006463389026429448 0.07427546866199757 4.524178050465869e-06 5.3444603116128055 0.167136042280565 QACTAQT(ph)PEPLR ddPTM_A549_MK2206_60min_R1 2 QACTAQTPEPLR 12 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 QACTAQT(1)PEPLR;QACTAQT(1)PEPLR 117.7 2.6871e-12 5137400.0 1431.0 1734.3 1488.8 1507.6 2182.3 1798.1 1288.2 1776.9 2315.1 2339.3 2500.3 True False 1672.5178154090079 1822.5684622057709 1699.9342269178214 1876.9620676787363 1861.2865608753305 1988.3737485178185 1522.249265269113 2028.7810165280252 1790.733546455021 1810.8505052855908 1879.4065052305114 0.8899180729417937 0.9697574511599505 0.9045058757574762 0.99869935666128 0.9903586880726698 1.0579796031268618 0.8099627520882756 1.0794796181037976 0.952818637943038 0.9635225270562144 1.0 10.876061432128528 -3.4110661617599214 0.6499721280234085 0.9795426585336544 1.0962005123590682e-06 0.11815233004946568 0.06834210722976523 43.651963972828455 1.8063475953982886 0.010145423291702692 53.17264429136912 0.00038809123847151534 3.4110661617599214 -0.979541562333142 QACTAQT(ph)PEPLR ddPTM_A549_PD325901_60min_R1 2 QACTAQTPEPLR 12 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 QACT(0.004)AQT(0.996)PEPLR;QACT(0.004)AQT(0.996)PEPLR 85.536 0.00041106 17486700.0 10155.4 9286.0 8919.2 7556.3 9703.0 8045.700000000001 8672.8 8894.2 8256.8 9289.400000000001 10406.3 True False 11186.368731989653 10068.56380921983 9524.510547506663 8023.035489397575 9021.49475353279 7980.178486743337 9002.848149938265 8716.798203635084 7909.795409795445 8702.86569866108 9126.391070970796 1.2257165669320516 1.103236068991816 1.0436228815355288 0.8791027501459178 0.9885062653328915 0.8744068081989901 0.9864631133958859 0.9551199522187315 0.866694769957306 0.9535933350854464 1.0 13.155828760061034 -5.653858482767448 1.4892204843790173 0.9365405619399966 1.240644390894878 0.778609972280565 0.048060284341843305 0.2329690624296499 0.7606280137778639 0.00809881526617775 0.08393348682964787 2.2189193490161375e-06 5.653858482767448 0.3041038289548815 QACTAQT(ph)PEPLRR ddPTM_A549_MK2206_60min_R1 2 QACTAQTPEPLRR 13 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 QACT(0.003)AQT(0.997)PEPLRR;QACTAQT(1)PEPLRR 90.367 0.00011428 112849000.0 1811.4499999999998 2193.1 1583.97 1905.09 2307.73 1965.37 1703.1399999999999 1315.85 2935.3 2814.9 2390.5 True False 2117.1784742995455 2304.7194225125263 1808.6007639783863 2371.837135522739 1968.265974031445 2173.3441488929784 2012.578492198756 1502.3757671216167 2270.45923671091 2179.0121349670453 1796.8728755563486 1.1782572396191489 1.2826279776742346 1.0065268325776282 1.3199804882069746 1.0953840980108454 1.2095146954789813 1.120045006843136 0.8361057632730142 1.2635614169466103 1.2126690566756864 1.0 10.81127262990844 -7.889298991513921 6.723267871362836 1.1004767357631982 1.1805697792189271 0.11444050362576763 0.13055315681882487 0.5016179346974483 28.1515540374731 0.02182838010671428 0.0302556905820387 1.2903306352388983e-08 7.889298991513921 0.08009304345572898 QACTAQT(ph)PEPLRR ddPTM_A549_PD325901_60min_R1 1 QACTAQTPEPLRR 13 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 QACTAQT(1)PEPLRR 114.06 1.2704e-05 50131000.0 6321.5 7308.9 8290.5 6832.4 7928.8 7227.1 7170.8 7620.3 8136.1 7292.2 7719.2 True False 6963.254026357658 7924.846653586782 8853.143184826442 7254.421830493763 7371.908440875075 7168.244893737372 7443.688718012324 7468.307138490298 7794.168011049896 6831.769247505366 6769.787336040459 1.0285779568417515 1.170619734448246 1.307743174987902 1.0715878461754988 1.0889423958163487 1.0588582089684908 1.0995454286110586 1.1031819417326618 1.1513165220945598 1.0091556659593919 1.0 12.724894798808185 -10.862435753810752 0.8805988993234133 0.9921657535208848 1.1240307608134605 0.28129378124392657 0.0708157938904042 0.7393429966361708 0.9140325333936574 0.06807126500555788 0.013039933875739514 1.3726640073565878e-11 10.862435753810752 0.13186500729257578 QADITSSSS(ph)SDIEDDDQNSIGEGSSDEQK ddPTM_A549_PD325901_60min_R1 1 QADITSSSSSDIEDDDQNSIGEGSSDEQK 29 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 QADIT(0.001)S(0.004)S(0.019)S(0.016)S(0.47)S(0.47)DIEDDDQNS(0.019)IGEGSSDEQK 69.35600000000001 9.9412e-05 1920100.0 353.15 779.34 333.59 421.9 348.05 320.47 432.12 374.51 418.97 581.93 461.43 True False 389.0015280247108 845.0177168939674 356.22942343963 447.95980479557966 323.604168707316 317.86019857148983 448.56456306513724 367.0401042525888 401.36214790742144 545.1868404872049 404.67703524577007 0.9612641542371211 2.0881286638387273 0.8802807978053001 1.1069563275897851 0.7996603229802338 0.7854663617826638 1.108450749602614 0.9069951400372313 0.9918085607790039 1.347214674922435 1.0 8.660627170541158 -5.805510064204487 24.999998148594837 0.9720583690010154 1.524701501169017 0.34103887721013615 0.28457634657450753 70.00967128374913 39714.289462810935 0.03022732610624694 0.0939813311335876 1.5649120540221983e-06 5.805510064204487 0.5526431321680016 QADPQPQAWPPPDS(ph)PVRVDTVR ddPTM_A549_MK2206_60min_R1 4 QADPQPQAWPPPDSPVRVDTVR 22 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 QADPQPQAWPPPDS(1)PVRVDTVR;QADPQPQAWPPPDS(0.999)PVRVDT(0.001)VR;QADPQPQAWPPPDS(0.999)PVRVDT(0.001)VR;QADPQPQAWPPPDS(0.999)PVRVDT(0.001)VR 157.11 3.7118e-33 53415800.0 13496.7 15633.8 13804.699999999999 12146.6 20170.4 14952.7 13623.7 14119.599999999999 23230.7 20544.800000000003 23757.8 True False 15774.612997366015 16429.493642641162 15762.414039718198 15122.517545281591 17203.36087956731 16534.98478920104 16098.949941970828 16121.096539461489 17968.98354180496 15903.715411016716 17858.082578076792 0.8833318430687225 0.9200032293954439 0.8826487373884523 0.846816419353247 0.96333751422377 0.9259104227404552 0.9014937562073133 0.9027339004049804 1.0062101271647335 0.8905611977929072 1.0 14.124289566189942 -8.760721471179258 24.98646297291295 1.002932565256539 0.9039679108206625 0.16896762726352377 0.04376000068950646 6.965008855463899 242412.69494849973 0.0047358633021979705 0.005216867712872067 1.7349163058570416e-09 8.760721471179258 -0.09896465443587654 QADPQPQAWPPPDS(ph)PVRVDTVR ddPTM_A549_PD325901_60min_R1 2 QADPQPQAWPPPDSPVRVDTVR 22 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 QADPQPQAWPPPDS(1)PVRVDTVR;QADPQPQAWPPPDS(0.998)PVRVDT(0.002)VR 212.01 1.1298999999999998e-73 80769000.0 20626.0 19322.1 20838.5 18651.800000000003 21697.0 19471.0 19010.9 21211.0 24483.0 24104.0 26149.0 True False 22719.936335941326 20950.441177915847 22252.725922080175 19803.87932468876 20173.077570586527 19312.434631589484 19734.37020266365 20787.92996529239 23454.06465192592 22582.069326385612 22932.838772168365 0.9907162633312793 0.9135563802655612 0.9703432768683838 0.8635598724359866 0.8796589803382246 0.8421301358917389 0.860528886053722 0.906469982709726 1.0227283628047883 0.9847044908278668 1.0 14.485127331460596 -8.753872051461565 19.005350751192747 1.0107328863929974 0.9003552662947427 0.5021713921528418 0.04366213103889735 4.743142425471187 11911.526936597185 0.007591506806585932 0.008494080052950482 1.7624952228727516e-09 8.753872051461565 -0.11037762009825469 QADSGS(ph)SEEK ddPTM_A549_MK2206_60min_R1 2 QADSGSSEEK 10 0 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 QADS(0.056)GS(0.924)S(0.019)EEK;QADS(0.005)GS(0.947)S(0.048)EEK 92.85600000000001 0.00061131 7681200.0 5472.9 3858.3999999999996 2936.2 2136.8 1468.24 1164.62 1117.46 1558.85 1604.4299999999998 6840.3 5911.7 True False 6396.591720441622 4054.7760794411256 3352.5973113085097 2660.3160959245965 1252.263840965767 1287.8593153878114 1320.4880173634708 1779.8217612779063 1241.0291667482315 5295.071479205328 4443.661735380237 1.439486644429355 0.9124853152428726 0.7544672639267924 0.5986765542352782 0.2818089934693494 0.28981938592083484 0.29716213699386795 0.4005304335177101 0.2792807465219984 1.1916009351130858 1.0 12.117533283373014 -3.010477542167797 12.711843544173844 0.6247768436531361 0.9044388220738148 0.0 0.3969107832433299 0.0 0.0 0.053228401382802666 0.0 0.0009761632595713947 3.010477542167797 0.27966197842067864 QADSGS(ph)SEEK ddPTM_A549_PD325901_60min_R1 2 QADSGSSEEK 10 0 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 QADS(0.002)GS(0.967)S(0.031)EEK;QADS(0.342)GS(0.556)S(0.102)EEK 110.38 0.00018852 13468500.0 4595.9 4440.0 4043.1 3611.6000000000004 4333.299999999999 3035.1 2140.9 3448.8999999999996 4172.8 5204.5 5952.4 True False 5062.472384677242 4814.174382181357 4317.489079135372 3834.680329461282 4028.943957073446 3010.3831518841976 2222.3731210454334 3380.10898389029 3997.431727302884 4875.886981794473 5220.292535372477 0.9697679488982941 0.9222039473000256 0.82705883815519 0.734571923599617 0.7717850924586115 0.576669435953248 0.42571811943233623 0.6474941702954035 0.7657486051244177 0.9340256218891324 1.0 12.349914939638433 -5.728731847720645 2.951427979775748 0.7972789296209648 0.9605583244428783 0.13391403106582023 0.15806424038735664 0.5410412940715906 9.264131780304245 0.027600189492081942 0.1299440785828259 1.867532430572544e-06 5.728731847720645 0.16327939482191345 QAEEECAHRGS(ph)PLPK ddPTM_A549_MK2206_60min_R1 4 QAEEECAHRGSPLPK 15 1 F2Z2A4;H7C1J2;H7C1M5;Q9H147 F2Z2A4 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 1 QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK 162.92 3.1912999999999997e-20 359547000.0 11515.100000000002 13625.4 12118.900000000001 10402.0 15293.8 13142.6 11709.4 11695.1 16747.5 16531.4 17680.9 True False 13458.567362834587 14318.874661211154 13837.542250533574 12950.490466963529 13044.10227957436 14533.341208648184 13836.846411071368 13352.916239741642 12954.21799026197 12796.945258444064 13290.244561984613 1.0126651394611235 1.0773973792904332 1.0411804076287994 0.9744358282169678 0.9814794768251054 1.0935345200658926 1.0411280504687066 1.004715615086294 0.9747162988494724 0.962882601502189 1.0 13.698080032328779 -8.460120859162064 4.449143770924248 0.988076477279046 1.0318530991756032 0.2993046051247238 0.0346731752177532 0.23940450549752645 9.461944604569085 0.005902741672030461 0.007079942099188579 3.466403709980026e-09 8.460120859162064 0.04377662189655718 QAEEECAHRGS(ph)PLPK ddPTM_A549_PD325901_60min_R1 4 QAEEECAHRGSPLPK 15 1 F2Z2A4;H7C1J2;H7C1M5;Q9H147 F2Z2A4 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 1 QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK 106.42 1.9716999999999997e-06 414808000.0 29381.899999999998 31400.4 32673.8 29348.7 33720.6 29211.6 30803.8 33953.600000000006 27289.0 28363.1 28562.3 True False 32364.728858188435 34046.62190771339 34891.24055152068 31161.50254326623 31352.18138575471 28973.710414675126 31976.055465486137 33276.36881191611 26142.138230053777 26572.24902552307 25049.318171337487 1.2920403117088255 1.35918357836466 1.3929018072613546 1.2440060176537087 1.2516181546861116 1.1566666292669034 1.2765239854741643 1.3284341148252239 1.0436267387096685 1.0607972977056193 1.0 14.612483714138895 -8.79878958808651 6.820524529039797 1.0198671049655803 1.2861870959997568 0.7724586986326902 0.060991149819639774 0.06186645397272897 8.076488665428485 0.011396647958969485 0.01218788624837064 1.589316572204711e-09 8.79878958808651 0.2663199910341765 QAEFFLSQQAS(ph)LLKNDETK ddPTM_A549_MK2206_60min_R1 1 QAEFFLSQQASLLKNDETK 19 1 F5GY68;F5H0F9;Q9UJX4-2;Q9UJX4-3;Q9UJX4 F5GY68 ANAPC5 Anaphase-promoting complex subunit 5 1 QAEFFLS(0.067)QQAS(0.928)LLKNDET(0.005)K 53.453 0.0020953000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QAEFFLSQQAS(ph)LLKNDETK ddPTM_A549_PD325901_60min_R1 1 QAEFFLSQQASLLKNDETK 19 1 F5GY68;F5H0F9;Q9UJX4-2;Q9UJX4-3;Q9UJX4 F5GY68 ANAPC5 Anaphase-promoting complex subunit 5 1 QAEFFLS(0.001)QQAS(0.999)LLKNDETK 95.71 6.6423e-07 2730400.0 2122.4 2194.3 2627.4 2769.2 2992.7 2700.0 2776.1 3321.2 3164.2 2796.3 2362.8 True False 2337.864485571701 2379.22136189652 2805.7111638396964 2940.247194690491 2782.503076254518 2678.0120951821473 2881.7460046402102 3254.9560605690012 3031.219677801904 2619.7411407804566 2072.1905790232654 1.1282092049051116 1.148167251594192 1.3539831674952303 1.4189077126662681 1.3427833831606653 1.2923580110302586 1.3906761442755577 1.5707802619695515 1.4628093132392679 1.2642375500111005 1.0 11.016940978211622 -10.853705546710458 1.1350237178065936 1.0026368610988832 1.3555670937785524 0.1744819632049356 0.14244043969999226 0.3310616490435227 0.7661308428980139 0.09013552797125021 0.0226649963870894 1.400536569793115e-11 10.853705546710458 0.3529302326796693 QAEIERET(ph)SVR ddPTM_A549_PD325901_60min_R1 1 QAEIERETSVR 11 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;H0YDQ3 E9PMS6 LMO7 LIM domain only protein 7 1 QAEIERET(0.5)S(0.5)VR 44.457 0.040094 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QAEKEVPWS(ph)PSAEK ddPTM_A549_PD325901_60min_R1 1 QAEKEVPWSPSAEK 14 1 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 QAEKEVPWS(0.952)PS(0.048)AEK 53.778999999999996 0.0053646 5814700.0 2629.7 3084.2 2591.1 2727.8 2502.3 3409.0 2945.1 3049.5 3775.0 3447.7 3616.9 True False 2896.665208117179 3344.116358000841 2766.9476275500615 2896.2900107167143 2326.5470804663623 3381.2382342503497 3057.177392120557 2988.675330213528 3616.3498779161205 3230.0116336118367 3172.0442294181676 0.9131856300277693 1.0542464468139638 0.8722916288142644 0.9130673475028961 0.7334535435822436 1.0659492711016054 0.9637877567304035 0.9421921997480237 1.1400691845269288 1.0182744627757923 1.0 11.631197172071376 -8.676789311936822 8.200970585842404 1.0660506641743388 0.9320838142988087 0.2579345787555922 0.09034025122243165 0.23832787012541104 20.467694018504957 0.01606548339691124 0.018207168218201997 2.1047992874972744e-09 8.676789311936822 -0.1339668498755301 QAEMGTQEKS(ph)PGTS(ph)PLLSR ddPTM_A549_PD325901_60min_R1 1 QAEMGTQEKSPGTSPLLSR 19 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 2 QAEMGT(0.007)QEKS(0.95)PGT(0.255)S(0.687)PLLS(0.102)R 59.358999999999995 0.0010892 8884700.0 2230.7 3499.7 3032.8 2345.5 3676.5 2320.7 2508.9 2746.2 3492.1 2924.8 2961.7 True False 2457.1590218454526 3794.632001198217 3238.6240457079352 2490.3762079830094 3418.275323236453 2301.8009886256336 2604.3775624227583 2691.424886647778 3345.3391811048696 2740.1276288505082 2597.4296757631655 0.9459963612387314 1.4609180901435934 1.246857258900138 0.958784844579593 1.3160222796915995 0.8861841420015841 1.0026749084775708 1.0361877789268712 1.287942157710952 1.0549381391992512 1.0 11.342868974002867 QAEMKNDKS(ph)EEEQSSSSVK ddPTM_A549_PD325901_60min_R1 1 QAEMKNDKSEEEQSSSSVK 19 2 G3V4C1;G3V2Q1 G3V4C1 HNRNPC 1 QAEMKNDKS(0.998)EEEQS(0.001)S(0.001)SSVK 50.426 0.0032688 12438000.0 3046.9 2842.8 3614.4 2874.3 3812.7 3512.7 3431.9 3653.8 3547.1 3642.8 4373.6 True False 3356.2190449907703 3082.3727328074674 3859.6949191528493 3051.8389829910734 3544.909105100946 3484.093735831971 3562.50283250774 3580.9220926493485 3398.0277223725197 3412.7929863158647 3835.674926534687 0.8750009083858736 0.8036063513839571 1.0062622597269635 0.7956458879971445 0.9241943524926313 0.9083391587043719 0.928781218622783 0.9335833096483249 0.8859008616359582 0.8897503181791081 1.0 11.905264741788496 -14.999999999999542 0.20120392884449464 1.495805663292457 0.8754915140895684 0.0 0.0641175468480268 37.8559309481297 0.44677784646515395 7.419324362234371 0.04366978834985643 1.0000000000010552e-15 14.999999999999542 -0.6203141492028886 QAENDS(ph)SNDDKTK ddPTM_A549_MK2206_60min_R1 1 QAENDSSNDDKTK 13 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 QAENDS(0.963)S(0.037)NDDKTK 66.673 0.0013345 4015600.0 1628.9 1253.5 980.83 914.36 674.88 460.93 354.33 284.35 606.74 1774.2 2164.3 True False 1903.8184972185436 1317.2977958686113 1119.9264426301766 1138.3782410471795 575.6060460081302 509.70530665942874 418.7071744781903 324.65748328535335 469.3143587646839 1373.4069877645848 1626.844578358754 1.170252230940964 0.8097256575041546 0.6884040783785363 0.6997461565723968 0.3538174781200253 0.3133091589939379 0.2573738020509642 0.19956269185399678 0.28848137370206123 0.8442152409851896 1.0 10.667860713458932 -5.2420631271370794 1.1500510403389737 0.5505924732259874 1.4767891506681892 0.3925575568109928 0.24914939394395919 1.9058209323463176 1.9639748469565101 0.04895253431868025 2.141178798244314 5.72712777923113e-06 5.2420631271370794 0.9261966774422018 QAENDS(ph)SNDDKTK ddPTM_A549_PD325901_60min_R1 2 QAENDSSNDDKTK 13 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 QAENDS(0.947)S(0.053)NDDKTK;QAENDS(0.742)S(0.257)NDDKT(0.001)K 74.732 0.00031348 16628000.0 6430.9 7651.2 6767.8 6157.9 7874.0 5315.7 4949.7 5865.6 6902.2 8707.400000000001 7950.9 True False 7083.760233821634 8295.99347588874 7227.103606087494 6538.259497394401 7320.957403825331 5272.410701614718 5138.063542079769 5748.606006525814 6612.124537047056 8157.61327798582 6972.989704907776 1.015885657888738 1.1897326436678657 1.0364426038089323 0.9376551198394283 1.049902224675973 0.756119100233843 0.7368523057568065 0.8244105111011123 0.9482481427433151 1.1698874691073005 1.0 12.767561636258193 -6.123950949647099 3.1394611578280482 0.9344701061982934 1.1054199748073528 0.23489961106513735 0.12505968026526204 0.2632031170578683 4.877515393976925 0.01623025634915049 0.04946004182449783 7.51707789064684e-07 6.123950949647099 0.17094986860905936 QAENDS(ph)SNDDKTKK ddPTM_A549_PD325901_60min_R1 2 QAENDSSNDDKTKK 14 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 Q9BXP5-5 SRRT Serrate RNA effector molecule homolog 1 QAENDS(0.814)S(0.184)NDDKT(0.002)KK;QAENDS(0.962)S(0.035)NDDKT(0.002)KK 46.159 0.007631999999999999 12809300.0 3535.8 4056.5 2999.2 2729.2 3510.6 2472.2 2168.6000000000004 2813.1 3135.7 3791.8999999999996 4421.8 True False 3894.7518130816147 4398.355491287987 3202.7437476547198 2897.776485537085 3264.027566912524 2452.0672228552985 2251.1272597034545 2756.990513665741 3003.9174336904853 3552.478786870296 3877.9466320996617 1.0043335255938926 1.1341970141828788 0.825886493935745 0.747245065610437 0.8416896560397636 0.6323107189145767 0.5804946465920322 0.7109408084280433 0.774615465005524 0.9160721185445645 1.0 11.921077234023516 -5.771290532547635 24.49469513676808 0.8245243354993022 1.0692652661045265 0.4177346379993878 0.12275706179716009 135.46324759152333 336831.1830384612 0.021393248405814563 0.06773539863281165 1.6932047083179102e-06 5.771290532547635 0.2447409306052244 QAEPELDLRS(ph)IKEVDEAK ddPTM_A549_MK2206_60min_R1 1 QAEPELDLRSIKEVDEAK 18 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;E7EQ12;H0Y9H6;D6RAA8;P20810-5;F8W7E0;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 QAEPELDLRS(1)IKEVDEAK 66.85300000000001 0.0003992 4272800.0 1219.6 1438.9 1166.5 1253.6 1044.3 1191.2 1043.1 983.32 1522.3 2072.1 1955.2 True False 1425.4386636427864 1512.1338639611838 1331.927240529042 1560.732056276243 890.6848533758446 1317.2519933454344 1232.6177678949014 1122.7086212912027 1177.5014806135716 1604.011170864049 1469.6698792251702 0.9699039789767596 1.028893553128 0.9062764770216641 1.061960973915504 0.6060441640441223 0.8962910732306137 0.8387038377249414 0.7639189161875657 0.8012013427358029 1.091409161702154 1.0 10.521276414492112 QAEPELDLRS(ph)IKEVDEAK ddPTM_A549_PD325901_60min_R1 2 QAEPELDLRSIKEVDEAK 18 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;E7EQ12;H0Y9H6;D6RAA8;P20810-5;F8W7E0;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 QAEPELDLRS(1)IKEVDEAK;QAEPELDLRS(1)IKEVDEAK 61.523999999999994 0.00062948 5441600.0 1507.23 1807.3600000000001 1439.61 1946.35 2395.77 1671.78 1739.3200000000002 1817.0900000000001 1936.79 2431.27 2014.1999999999998 True False 1660.2428800359191 1959.6725701304715 1537.3105916781847 2066.571619018432 2227.499380157814 1658.165577956893 1805.5107743924234 1780.8467144704705 1855.3934516686518 2277.7591972768655 1766.4661690657952 0.9398667855121999 1.1093745266386021 0.8702745733824041 1.1698902901216326 1.260991814712103 0.9386908206873967 1.0221032284740994 1.0081408552603532 1.0503419109633367 1.2894439968139726 1.0 10.786650404007618 -11.238407153462486 0.4404695114649361 0.9787675792602001 1.0469455284359854 0.0 0.1364185814201086 11.588010784050226 2.1472939228397814 0.375880350012473 0.02711998860491145 5.775543331553508e-12 11.238407153462486 0.06817794917578535 QAEQLS(ph)AAGEGGDAGR ddPTM_A549_MK2206_60min_R1 2 QAEQLSAAGEGGDAGR 16 0 F8WBJ6;Q9NRX1 F8WBJ6 PNO1 RNA-binding protein PNO1 1 QAEQLS(1)AAGEGGDAGR;QAEQLS(1)AAGEGGDAGR 131.11 4.2937000000000004e-10 21657000.0 2951.1 2451.6000000000004 2427.0 2590.7 3917.6 2517.5 2365.1 2833.1000000000004 3908.9 4071.6 4011.8 True False 3449.173532532162 2576.3759683697535 2771.1850945254914 3225.4216163009423 3341.3262296133407 2783.900179018749 2794.8080556497284 3234.700601004869 3023.54039123063 3151.822732150989 3015.5593399527115 1.1437922931359892 0.8543608922682168 0.918962216332625 1.0695931509513992 1.108028678243731 0.9231787092149892 0.9267959076850915 1.072670186969557 1.0026466238525567 1.0451867719507102 1.0 11.55820990938521 -6.244060496323741 24.801775962416315 1.0067698708810433 0.9605707213186229 0.037562336157726084 0.08530528807664212 1832.495873856667 2615188.6987664076 0.010943541548185961 0.028876648180822723 5.700848551074709e-07 6.244060496323741 -0.04619914956242044 QAEQLS(ph)AAGEGGDAGR ddPTM_A549_PD325901_60min_R1 2 QAEQLSAAGEGGDAGR 16 0 F8WBJ6;Q9NRX1 F8WBJ6 PNO1 RNA-binding protein PNO1 1 QAEQLS(1)AAGEGGDAGR;QAEQLS(1)AAGEGGDAGR 194.94 3.9122e-39 22408100.0 4112.3 3905.2999999999997 4528.0 3913.2 4771.0 3885.3 4511.200000000001 4563.0 4999.700000000001 4732.8 4484.9 True False 4529.777668684744 4234.4133366515425 4835.297309075945 4154.909476477984 4435.90141905647 3853.6594049671107 4682.876184623363 4471.987385395751 4789.579995925095 4433.970200295302 3933.2857321235183 1.1516523276429218 1.076558792072665 1.2293277525163282 1.0563457016469573 1.127785195676999 0.9797557735238781 1.190576150208938 1.1369597049287838 1.2177045661361798 1.1272942019143553 1.0 11.941519278810777 -11.061663261469358 1.3918697143633674 1.0004768946554643 1.1374730442596006 0.001574184564854364 0.07846370437832245 0.39513935432811864 1.3735953480457415 0.04988029599175907 0.011230875691288009 8.676343519005987e-12 11.061663261469358 0.1369961496041363 QAES(ph)LSLTR ddPTM_A549_MK2206_60min_R1 1 QAESLSLTR 9 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QAES(0.977)LS(0.023)LTR 69.86399999999999 0.0038164 5937500.0 899.71 1235.3 1103.7 1206.1 1133.2 1180.2 1123.2 1001.1 1341.8 1578.5 1598.9 True False 1051.5590522024033 1298.1714936070966 1260.2212562125192 1501.5945541438866 966.5077811409628 1305.0879806466446 1327.2709010637077 1143.0089907401689 1037.8844424143006 1221.9157536841387 1201.8490026049121 0.8749510545195218 1.0801452518522818 1.0485687082828956 1.2494036695868616 0.8041840356368679 1.0859001237409776 1.1043574510499685 0.9510420928609067 0.8635730779530278 1.0166965659044802 1.0 10.231039935389095 -8.414561335595884 7.199151315977366 0.9341567438465976 1.0386568115794208 0.08080887866694464 0.11705037720209678 0.3769799415334451 22.316363308409823 0.01868603845498901 0.022586052873865208 3.849804398864309e-09 8.414561335595884 0.10450006773282317 QAESLS(ph)LTR ddPTM_A549_PD325901_60min_R1 1 QAESLSLTR 9 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QAES(0.035)LS(0.959)LT(0.006)R 60.301 0.0081478 13062000.0 3503.5 3638.4 3378.5 3497.8 3475.1 3014.5 3261.8 3400.1 3382.2 4325.1 3608.4 True False 3859.1727408596184 3945.020736965909 3607.785326570911 3713.8511619198325 3231.020964444172 2989.9509114542884 3385.9295839254487 3332.282338173149 3240.057895917324 4052.0124478738176 3164.5896755322287 1.2194859797141229 1.2466136660521163 1.1400483779825719 1.173564835477518 1.0209920702913153 0.9448147210274365 1.0699426880219454 1.052990333608643 1.0238477111167352 1.2804226971992316 1.0 11.627802734884071 -6.720018521384803 3.693909929496198 1.0141686852125016 1.1997480894330335 0.30029303612423486 0.08884690016648575 0.06647341739742707 1.8849328208916705 0.005609393310169921 0.01187670830183886 1.9053794573897856e-07 6.720018521384803 0.18557940422053187 QAEVANQETKEDLPAENGETKTEES(ph)PASDEAGEK ddPTM_A549_PD325901_60min_R1 2 QAEVANQETKEDLPAENGETKTEESPASDEAGEK 34 2 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 QAEVANQETKEDLPAENGET(0.002)KT(0.008)EES(0.945)PAS(0.045)DEAGEK;QAEVANQETKEDLPAENGET(0.004)KT(0.013)EES(0.918)PAS(0.065)DEAGEK 120.47 1.1175e-21 160646000.0 9032.9 9524.4 8509.6 7353.8 11380.0 7218.299999999999 8890.099999999999 9677.5 10672.8 9174.8 9664.099999999999 True False 9949.913358330481 10327.054613884708 9087.112628381772 7808.027524308449 10580.708058868715 7159.516558019735 9228.417620349383 9484.474670648115 10224.25933166176 8595.501562218837 8475.476965777356 1.1739650049792676 1.218462943806435 1.0721653383135963 0.9212493356817602 1.248390869515893 0.8447331739474649 1.088837555409835 1.1190490764053673 1.2063343895506664 1.0141613972790111 1.0 13.049078844273794 -5.765701114356669 24.896093222663715 1.080325912978773 1.1962139885257543 0.16227994916637634 0.11216539106117436 142.87316753954795 834659.2662368397 0.015964483049230423 0.05227111590403101 1.7151372754135152e-06 5.765701114356669 0.11588807554698133 QAEVANQETKEDLPAENGETKTEES(ph)PASDEAGEKEAK ddPTM_A549_MK2206_60min_R1 1 QAEVANQETKEDLPAENGETKTEESPASDEAGEKEAK 37 3 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 QAEVANQETKEDLPAENGET(0.135)KT(0.135)EES(0.587)PAS(0.143)DEAGEKEAK 65.609 9.7996e-05 15530000.0 1950.6 2528.6 1921.1 2115.5 2919.4 1803.1 1783.0 1862.0 3065.8 3591.0 3937.3 True False 2279.8135924086737 2657.294939476163 2193.5408673642046 2633.7975949684037 2489.960127305794 1993.9028451990873 2106.9480204741703 2125.9442021358464 2371.4011950765857 2779.7906059421875 2959.5597460481085 0.7703218681268057 0.8978683207948214 0.7411713415460638 0.8899288478583025 0.8413278801452244 0.6737160308595019 0.7119126496052569 0.7183312332094709 0.8012682285745746 0.9392581479911104 1.0 11.531166866113503 -10.354023701381067 0.840275701336027 0.9938833402499608 0.7840150083162714 0.5036091180309283 0.07057384397515709 0.34271138388935873 0.4570182451665404 0.041109118958813806 0.01409618651669402 4.425642190061608e-11 10.354023701381067 -0.20986833193368948 QAFQIGS(ph)PWR ddPTM_A549_MK2206_60min_R1 2 QAFQIGSPWR 10 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 QAFQIGS(1)PWR;QAFQIGS(1)PWR 101.35 0.00042737 8125700.0 2997.1 3032.3 2108.86 1480.85 4202.6 3529.1 3463.7 3111.7 4985.8 4527.799999999999 4303.5 True False 3502.937207940141 3186.6311179995146 2407.928058690166 1843.6583164778829 3584.403107150555 3902.5470195730163 4093.009455140992 3552.7930041815825 3856.5242606865586 3504.966835306327 3234.822179442266 1.0828840083395563 0.985102407869894 0.7443772563428295 0.5699411634415584 1.1080680508282412 1.2064177883947478 1.2652965845086084 1.0982962299319152 1.1921904966508803 1.0835114392317657 1.0 11.659470693050565 -6.941297360264976 24.999378225253185 1.1169510944603958 0.8471492026262804 0.4996615054114294 0.13909570604985602 58.54394461715131 24931.34954036926 0.022044135296006954 0.04165950123170173 1.1447288802650071e-07 6.941297360264976 -0.2698018918341154 QAFQIGS(ph)PWR ddPTM_A549_PD325901_60min_R1 2 QAFQIGSPWR 10 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 QAFQIGS(1)PWR;QAFQIGS(1)PWR 99.5 0.00047226 9075700.0 4772.1 4748.4 3988.5 3815.1000000000004 4419.5 3724.7 3399.1 3786.5 5674.7 4968.2 6016.1 True False 5256.5600789656555 5148.564332511248 4259.183594798898 4050.7500622792522 4109.089566447305 3694.3672781203486 3528.4546105588906 3710.9752870482134 5436.212093300825 4654.507004121681 5276.15783920005 0.9962856000840631 0.975816965568993 0.8072509816053302 0.767746186852782 0.7788033814906319 0.7002002955014844 0.6687545593014065 0.7033480422964102 1.0303353802101267 0.8821773620076876 1.0 12.365272008922705 -8.774298096004914 24.97583065293509 1.0143250646573914 0.7964396810483929 0.3163443764292124 0.10682270558186771 146.06010561618496 283695.5313418625 0.01890959645856625 0.020193070823777474 1.6815194843281226e-09 8.774298096004914 -0.21788538360899845 QAFQIGSPWR ddPTM_A549_MK2206_60min_R1 1 QAFQIGSPWR 10 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 89.08 0.0019122 10616000.0 2565.8 3004.9 2418.3 2514.9 3741.7 3009.0 3247.3 3004.9 4454.8 3869.1 4583.1 False True 2998.8443122127437 3157.8365750343746 2761.2513037045724 3131.0506128981515 3191.3008866000164 3327.4103827874546 3837.292376267964 3430.8537771202996 3445.794912853799 2995.067622793346 3444.989782874835 0.8704943994667572 0.9166461365813307 0.801526703339107 0.9088707979520618 0.9263600439293275 0.9658694488233691 1.1138762719539195 0.9958966479886803 1.0002337104112664 0.8693981148164596 1.0 11.750283988863739 -7.069758528027135 1.9153925177439377 1.0077152515717973 0.8707941206551143 0.44954330356544725 0.059970000545155645 0.14617507172825966 1.0579242792743404 0.006418782479732475 0.01291344326169249 8.516114108507727e-08 7.069758528027135 -0.136921130916683 QAFQIGSPWR ddPTM_A549_PD325901_60min_R1 2 QAFQIGSPWR 10 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 147.4 9.7827e-08 30404000.0 12336.8 11175.099999999999 10734.1 9752.0 12131.3 12121.2 10641.9 10153.5 14668.9 13626.6 14689.2 False True 13589.22285412785 12116.864896016852 11462.580575386952 10354.358891601074 11279.239338713018 12022.488965971052 11046.883327971129 9950.98047723334 14052.417145473852 12766.214150469892 12882.521522510817 1.05485737635929 0.9405662451131122 0.889777715904245 0.8037525008988301 0.875545934000868 0.9332403555439864 0.8575094020738014 0.7724404310014211 1.090812627086923 0.9909716920062823 1.0 13.65312738231741 -8.778292922250795 24.99400882106733 1.042883747811551 0.8894487210139859 0.39485454604121295 0.07444958125349002 156.63484186618797 232290.49252475915 0.013403064404504653 0.014286733199177294 1.6661230694529932e-09 8.778292922250795 -0.15343502679756504 QAFQIGSPWRT(ph)MDASER ddPTM_A549_MK2206_60min_R1 2 QAFQIGSPWRTMDASER 17 1 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 QAFQIGS(0.18)PWRT(0.801)MDAS(0.019)ER;QAFQIGS(0.018)PWRT(0.903)MDAS(0.078)ER 55.126999999999995 0.0045765 5210600.0 1704.24 2005.8799999999999 1530.88 1465.02 2533.0 1416.94 1274.19 1638.23 2677.1 2294.4 2719.3 True False 1991.87404733239 2107.9707241938017 1747.9818036700383 1823.9499657672459 2160.3990554448105 1566.8796503113508 1505.6938296174897 1870.4541193689618 2070.7411244502346 1776.0934464699944 2044.0227611379942 0.9744872147232986 1.0312853478305717 0.8551674848751991 0.8923334908226637 1.056934930725539 0.766566635216431 0.7366326140024028 0.9150847803317027 1.0130714607587663 0.8689205816285371 1.0 10.997195546103022 -8.725256431925473 6.067328378438261 1.0062358758239207 0.9003383361662668 0.00792920508398387 0.10136457025497779 0.21963689159931446 21.72370283080034 0.016330624415020735 0.01832212684787948 1.882537205255213e-09 8.725256431925473 -0.10589753965765392 QAFQIGSPWRT(ph)MDASER ddPTM_A549_PD325901_60min_R1 4 QAFQIGSPWRTMDASER 17 1 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 QAFQIGS(0.149)PWRT(0.83)MDAS(0.02)ER;QAFQIGS(0.004)PWRT(0.948)MDAS(0.048)ER;QAFQIGS(0.087)PWRT(0.906)MDAS(0.007)ER;QAFQIGS(0.021)PWRT(0.838)MDAS(0.141)ER 66.325 0.00088467 20802000.0 7156.51 8161.9400000000005 8552.0 8326.79 9070.470000000001 7759.27 8242.48 8395.310000000001 10265.9 8520.060000000001 9178.36 True False 7883.033626855791 8849.775328130918 9132.390147353679 8841.116906787824 8433.391478622758 7696.08107769777 8556.152086858117 8227.858956056716 9834.459923628894 7982.1019575574655 8049.479906417806 0.979322107577496 1.0994220037837525 1.1345317031069888 1.098346353997213 1.0476939599412953 0.9560966878818751 1.0629447102584038 1.0221603198855977 1.221750974965219 0.9916295276659278 1.0 12.97467985538354 QAFS(ph)MYEPGSALKPFGGPPGDELTTR ddPTM_A549_MK2206_60min_R1 1 QAFSMYEPGSALKPFGGPPGDELTTR 26 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QQI0 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 QAFS(0.999)MYEPGS(0.001)ALKPFGGPPGDELTTR 95.09899999999999 2.3536e-09 5838600.0 1971.6 2168.6 2184.1 1841.3 3061.5 2208.2 2236.7 2240.1 3408.8 3290.5 3039.5 True False 2304.3578790079673 2278.972477160488 2493.838222065564 2292.4185826590992 2611.157405544526 2441.8702583154704 2643.0794376862477 2557.641035018532 2636.7122427350337 2547.1737646485003 2284.7082640675653 1.0086004919093778 0.9974894882654007 1.091534644176266 1.0033747497274803 1.1428843877405026 1.0687886487389435 1.1568564263783327 1.1194606660480373 1.1540695519876925 1.1148792188082939 1.0 11.157794243007386 -5.760392380655964 24.983599790580833 1.0835552584733306 1.0030449631122667 0.2969350888825788 0.052127038263188825 33.365840451880615 796054.6981492594 0.008966528093391378 0.031249614136215305 1.7362314524052199e-06 5.760392380655964 -0.08051029536106391 QAFS(ph)MYEPGSALKPFGGPPGDELTTR ddPTM_A549_PD325901_60min_R1 1 QAFSMYEPGSALKPFGGPPGDELTTR 26 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QQI0 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 QAFS(0.988)MYEPGS(0.012)ALKPFGGPPGDELTTR 101.58 1.7438e-12 7600600.0 2704.9 2755.5 2161.4 2640.7 2835.5 2612.6 3219.9 3507.3 3209.2 2966.2 2904.8 True False 2979.499456757866 2987.7156554280923 2308.085601554054 2803.8100415351673 2636.344261943961 2591.3238518047697 3342.4350564968886 3437.3441500763765 3074.328484293619 2778.9136257851396 2547.528015044348 1.1695649426277253 1.1727901078159806 0.9060098997631137 1.1006002779860922 1.0348636978180854 1.0171915034895735 1.3120307359755188 1.3492861039318298 1.2067888816681376 1.0908275039074549 1.0 11.31488229638912 QAFSMY(ph)EPGSALKPFGGPPGDELTTR ddPTM_A549_MK2206_60min_R1 1 QAFSMYEPGSALKPFGGPPGDELTTR 26 1 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QQI0 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 QAFS(0.056)MY(0.934)EPGS(0.011)ALKPFGGPPGDELTTR 79.558 9.9542e-07 7668600.0 1963.8 2451.6 1992.0 1757.3 3284.2 2259.2 2188.9 1755.5 3417.2 3560.9 3482.2 True False 2295.2414296996585 2576.3759683697535 2274.4955534795145 2187.838578888195 2801.0985305534327 2498.26704446441 2586.5947964194684 2004.347500993274 2643.209656147079 2756.4902168475446 2617.473636169135 0.8768918998775144 0.9842987271269976 0.8689659838593087 0.8358588788272412 1.0701534838200115 0.9544573859092647 0.9882028077291889 0.7657565193003373 1.0098323893781833 1.0531109764612074 1.0 11.353959290716128 QAGAPGGSSGSGGS(ph)PELSALR ddPTM_A549_MK2206_60min_R1 2 QAGAPGGSSGSGGSPELSALR 21 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 QAGAPGGSS(0.001)GS(0.003)GGS(0.996)PELS(0.001)ALR;QAGAPGGS(0.018)S(0.028)GS(0.055)GGS(0.887)PELS(0.012)ALR 146.78 9.769e-22 18951700.0 2082.98 2580.0 2259.6 2536.3 2460.2 1879.6100000000001 2180.1 2675.5 3229.1 2745.6000000000004 3960.1 True False 2434.536100028412 2711.310979929011 2580.045257350556 3157.693613858833 2098.307839007234 2078.50908261586 2576.195950328514 3054.7603183751107 2497.7140058131004 2125.3670530979857 2976.697876800123 0.8178646946345386 0.9108452023500629 0.8667474376418882 1.0608042013498782 0.7049112559796843 0.6982600077809058 0.8654542909466717 1.0262245094416176 0.8390888525435714 0.7140016021319244 1.0 11.539497085760681 -11.106895514835283 0.586918165075053 1.04045983063984 0.862205684518791 0.0 0.1360774006925311 2.352969579472992 0.9044827318675573 0.24260813118403 0.022663439961919465 7.818158759045682e-12 11.106895514835283 -0.17825414612104906 QAGAPGGSSGSGGS(ph)PELSALR ddPTM_A549_PD325901_60min_R1 2 QAGAPGGSSGSGGSPELSALR 21 0 Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4 Q9Y2J4 AMOTL2 Angiomotin-like protein 2 1 QAGAPGGSSGSGGS(0.999)PELS(0.001)ALR;QAGAPGGSSGS(0.002)GGS(0.92)PELS(0.078)ALR 217.82 1.3816999999999999e-67 36788000.0 6601.0 8439.3 7990.299999999999 7156.9 8462.599999999999 7136.6 6952.4 7897.9 8224.9 8049.200000000001 8766.9 True False 7271.128660600641 9150.509428725923 8532.56980757719 7598.965458500792 7868.216170385099 7078.481895732191 7216.977386499257 7740.37018871731 7879.236055860214 7540.972138314935 7688.626877957956 0.9456992485154645 1.190135712653575 1.1097651040966343 0.9883384353434801 1.0233577848525848 0.9206431796066277 0.9386562127483593 1.0067298506717361 1.0247910557929016 0.9807956944735707 1.0 12.908510253038468 -6.263689203291591 24.73726879087846 0.9994428994117099 1.0926935939318307 0.29916920245715606 0.06254965125313111 150.69126462106442 1656891.1250266659 0.008296933859775188 0.02016983583033331 5.448924579334879e-07 6.263689203291591 0.0932506945201208 QAGGFLGPPPPSGKFS(ph) ddPTM_A549_MK2206_60min_R1 1 QAGGFLGPPPPSGKFS 16 1 Q9UM00-1;Q9UM00-2;Q9UM00;J3QQY2 Q9UM00-1 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 1 QAGGFLGPPPPS(0.009)GKFS(0.991) 83.38600000000001 0.00013330000000000001 3453000.0 2239.3 2271.4 2735.5 2974.1 2819.3 2322.6 2229.6 1691.4 3272.6 3557.3 3694.0 True False 2617.239094371345 2387.004558066185 3123.435033405226 3702.754633512424 2404.584704704127 2568.3759903828986 2634.6894595901344 1931.1611296952567 2531.3613252683267 2753.703459347854 2776.6778507865097 0.9425793106067372 0.8596620444788193 1.1248820357466012 1.3335197068192832 0.8659934043205678 0.9249816249498989 0.948863930629851 0.6954934037984437 0.9116510669580572 0.9917259427728902 1.0 11.439144090543184 QAGIGGEPAAAGAGCS(ph)PRPK ddPTM_A549_MK2206_60min_R1 2 QAGIGGEPAAAGAGCSPRPK 20 1 J3QQY0;J3KSZ8;Q68DK7 J3QQY0;Q68DK7 MSL1 Male-specific lethal 1 homolog 1 QAGIGGEPAAAGAGCS(1)PRPK;QAGIGGEPAAAGAGCS(1)PRPK 119.32 7.3018e-15 11919000.0 2712.9 3772.9 3201.3 2715.3 4295.9 3546.3 2573.5 2891.9 4740.2 4143.3 4476.0 True False 3170.7711959630324 3964.924494641152 3655.292477587332 3380.5486218944507 3663.978800744317 3921.5671121565783 3041.0716380764316 3301.835681072315 3666.5522685439487 3207.3256523531772 3364.4856686844623 0.9424237485912152 1.178463778741987 1.0864342540108298 1.0047742670921433 1.0890160225223842 1.1655769999727592 0.9038741541929385 0.9813790297294849 1.0897809144116808 0.9532885463611632 1.0 11.716170260537139 -7.727065142146138 24.999967502462194 1.0284814915816136 1.0799433396238123 0.16675564083556127 0.07959806352293045 360.94120951252455 262507.5050064548 0.011856499846740755 0.017585581268862432 1.8747132887300862e-08 7.727065142146138 0.051461848042198666 QAGIGGEPAAAGAGCS(ph)PRPK ddPTM_A549_PD325901_60min_R1 1 QAGIGGEPAAAGAGCSPRPK 20 1 J3QQY0;J3KSZ8;Q68DK7 J3QQY0;Q68DK7 MSL1 Male-specific lethal 1 homolog 1 QAGIGGEPAAAGAGCS(1)PRPK 85.00200000000001 1.7045e-05 13971000.0 3792.3 3730.8 3923.2 3678.2 4158.8 3938.0 3765.7 4336.5 3697.9 4189.4 4422.3 True False 4177.291504256295 4045.207609243738 4189.4519441181 3905.3940602017074 3866.7002350811294 3905.9302336397363 3909.0057741701066 4250.005105581562 3542.4901227936484 3924.880569032523 3878.3851352694232 1.077069800590113 1.0430133852507986 1.080205239551865 1.0069639615433417 0.9969871738414957 1.0071022081122945 1.0078952032437996 1.0958182226238147 0.9133930744986622 1.0119883487950379 1.0 11.921240359162583 -6.881887330725392 0.45852100481207236 0.9655529043689535 1.0808014156924346 0.11902786664121323 0.04559999599152995 1.3378753261461669 0.4374312356395034 0.013299502371760814 0.06615435802576419 1.3125403679781487e-07 6.881887330725392 0.11524851132348113 QAGSHSNS(ph)FR ddPTM_A549_MK2206_60min_R1 4 QAGSHSNSFR 10 0 Q5JWG0;P18433-6;P18433 Q5JWG0 PTPRA Receptor-type tyrosine-protein phosphatase alpha 1 QAGSHSNS(1)FR;QAGS(0.003)HS(0.12)NS(0.877)FR;QAGSHS(0.001)NS(0.999)FR;QAGS(0.003)HS(0.199)NS(0.799)FR 132.06 3.1906999999999996e-07 101885100.0 6742.9 6730.4 5780.2 4630.51 6533.0 4968.91 4815.7 5593.1 7285.1 9586.3 9138.4 True False 7880.936671922714 7072.948612137301 6599.919276216009 5764.985157871492 5572.004354212768 5494.71675810449 5690.650354569529 6385.939053150372 5635.036481914167 7420.748172025505 6869.083072990644 1.1473054828686955 1.0296787121338304 0.9608151781082701 0.8392656045374551 0.8111714904310864 0.7999199747211987 0.8284439559255392 0.9296639719295283 0.820347697361709 1.080311315669484 1.0 12.745901816844313 -5.607962146058612 1.7996579878257826 0.8890588555903658 1.1533210477938292 0.47426072299141575 0.08387289716342401 0.3100026428098993 1.584176742708803 0.01177650468199027 0.11008437243823546 2.4662542913283768e-06 5.607962146058612 0.26426219220346336 QAGSHSNS(ph)FR ddPTM_A549_PD325901_60min_R1 4 QAGSHSNSFR 10 0 Q5JWG0;P18433-6;P18433 Q5JWG0 PTPRA Receptor-type tyrosine-protein phosphatase alpha 1 QAGSHS(0.016)NS(0.984)FR;QAGSHSNS(1)FR;QAGSHS(0.003)NS(0.997)FR;QAGSHS(0.005)NS(0.995)FR 133.48 2.6851999999999997e-07 136905000.0 8610.2 9014.300000000001 9308.9 7885.8 10429.4 7462.700000000001 8566.5 8779.0 8662.6 9983.399999999998 10511.599999999999 True False 9484.301165505767 9773.966696688603 9940.65793296313 8372.887956048777 9696.874923476757 7401.926245450299 8892.502845268667 8603.895958007735 8298.541047002964 9353.046420222301 9218.739838522504 1.0288066841710357 1.0602280645610547 1.0783098457149136 0.9082464743240555 1.051865557910232 0.8029216980958443 0.9646115413854522 0.9333049970728634 0.9001817159787621 1.0145688655990235 1.0 13.170353838682543 -6.256693618781497 24.919328471979647 0.9453361691876666 1.0562261896925418 0.36661649795380213 0.06367394793583363 300.8262020993999 1579587.8417068424 0.00853101078479702 0.021792392837720602 5.53740618197688e-07 6.256693618781497 0.11089002050487518 QAHDLS(ph)PAAESSSTFSFSGR ddPTM_A549_MK2206_60min_R1 2 QAHDLSPAAESSSTFSFSGR 20 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR 163.62 3.5025e-27 12392800.0 3206.1000000000004 3483.3999999999996 2846.2 1929.25 3080.6 2683.6 2413.5 2692.3 3676.0 3715.4 4356.7 True False 3747.2112983807283 3660.6901811956304 3249.8339579886497 2401.9163366073244 2627.4478208461433 2967.5767707704904 2852.0017091499785 3073.9417698229504 2843.3918693657565 2876.0885595426353 3274.811151196963 1.1442526378997764 1.1178324526767374 0.9923729363144547 0.7334518620194053 0.8023204085786124 0.9061825655765902 0.8708904353484795 0.938662300786232 0.8682613250313626 0.8782456229549017 1.0 11.677195997697762 -5.869098572676611 3.7573691673550043 0.90778645414699 1.1332886091841947 0.6393872333414462 0.07139611137945213 0.13339150384701842 3.522741749346943 0.011819926776756676 0.042100074553068044 1.3517657154375014e-06 5.869098572676611 0.22550215503720472 QAHDLS(ph)PAAESSSTFSFSGR ddPTM_A549_PD325901_60min_R1 4 QAHDLSPAAESSSTFSFSGR 20 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR 172.3 2.0237e-34 183685000.0 7860.6 8871.7 9450.800000000001 10076.300000000001 11226.5 10301.5 10676.3 11649.6 10288.8 12946.6 12523.599999999999 True False 8658.602325332131 9619.349294233858 10092.188120277155 10698.690166062335 10437.98936932247 10217.60799945144 11082.592438795526 11417.239589065597 9856.397516265795 12129.149466519426 10983.276593641343 0.7883441932387408 0.8758178137663293 0.9188686121334616 0.9740891140132293 0.950352955270692 0.9302877800024467 1.0090424605360189 1.039511250738736 0.8974004644453784 1.1043288733656653 1.0 13.423020891107111 -5.35230318438648 1.2099536940290008 0.9609491931673882 0.7265965020291306 0.5112296006476105 0.05735139845385954 0.7235675917638936 0.9765354922256703 0.006832875154442614 0.2027125104140588 4.443209752128258e-06 5.35230318438648 -0.23435269113825763 QAHDS(ph)LYR ddPTM_A549_MK2206_60min_R1 3 QAHDSLYR 8 0 H7C3T6;Q9C0H2-3;Q9C0H2-2;Q9C0H2;Q9C0H2-4 H7C3T6 TTYH3 Protein tweety homolog;Protein tweety homolog 3 1 QAHDS(1)LYR;QAHDS(1)LYR;QAHDS(1)LYR 94.465 0.00077907 33033000.0 1044.3 1183.6100000000001 1135.69 812.0 1265.82 942.14 846.38 766.72 1431.87 1529.8899999999999 1467.1599999999999 True False 1220.5523093163013 1243.8506933929384 1296.7479192425446 1010.9400364520653 1079.6195548216137 1041.8366294580828 1000.1562902798261 875.4049079815223 1107.5537312265355 1184.2867864452487 1102.823680443945 1.1067519957723109 1.127878114561543 1.17584337572488 0.9166832870736946 0.9789593513144454 0.9446991825916254 0.9069049821973446 0.7937850116068649 1.0042890362860966 1.0738677518862403 1.0 10.106986435806409 -6.258607313173322 24.994877553391248 0.9700829749365076 1.1359298628558265 0.5704582060914948 0.07006018403395677 151.2192771994934 1334601.3459016224 0.00995443323342992 0.025123365016009716 5.513059591079814e-07 6.258607313173322 0.1658468879193189 QAHDS(ph)LYR ddPTM_A549_PD325901_60min_R1 4 QAHDSLYR 8 0 H7C3T6;Q9C0H2-3;Q9C0H2-2;Q9C0H2;Q9C0H2-4 H7C3T6 TTYH3 Protein tweety homolog;Protein tweety homolog 3 1 QAHDS(1)LYR;QAHDS(1)LYR;QAHDS(1)LYR;QAHDS(0.988)LY(0.012)R 94.616 0.00077791 46416700.0 4976.79 5206.4400000000005 5346.5599999999995 6089.57 6613.4 5712.699999999999 5338.299999999999 5365.7 6876.6 6798.3 7288.0 True False 5482.0300570808395 5645.204970802769 5709.409713077095 6465.708908483091 6148.897598991419 5666.177665239649 5541.451927729845 5258.676904189781 6587.600416020659 6369.054177794863 6391.622202438449 0.8576899390250892 0.8832194381966262 0.8932645785758293 1.0115912210856859 0.9620245697008768 0.886500716997629 0.8669867761607909 0.8227452652291556 1.0306617330272498 0.9964691241239233 1.0 12.641966420278326 -8.783365361279655 24.996442292265193 1.0144791682494172 0.9018551525764994 0.5014531392104746 0.04911938789891011 142.97588242122848 162997.18246404923 0.00915825184125025 0.009753637005156076 1.6467764160661269e-09 8.783365361279655 -0.1126240156729178 QAIEEEGGDPDNIELTVST(ph)DTPNKKPTK ddPTM_A549_MK2206_60min_R1 1 QAIEEEGGDPDNIELTVSTDTPNKKPTK 28 2 Q9NWH9;H7BXE3;H0YL55;H0YKU6;H0YMW8;H0YNF3;H0YMR6;H0YLE6 Q9NWH9 SLTM SAFB-like transcription modulator 1 QAIEEEGGDPDNIELT(0.022)VS(0.026)T(0.525)DT(0.424)PNKKPT(0.004)K 180.71 3.7779000000000002e-59 39856000.0 1455.2 1340.9 1555.9 1174.4 1855.1 1435.0 1361.2 1293.1 2380.3 2191.3 1813.6 True False 1700.8021837758138 1409.1460825530287 1776.5500158929601 1462.1280527208187 1582.2172474361107 1586.8507475240917 1608.5124203418068 1476.400884952664 1841.1658505580283 1696.2838080760557 1363.2330671863585 1.2476239204541746 1.0336795053405154 1.3031887640164612 1.0725444444643455 1.160635907036589 1.1640348123298303 1.1799247385200917 1.0830142845638846 1.3505877277156266 1.2443094646883064 1.0 10.412816520414168 -11.16784758943088 1.5767505528176322 1.0002989546192156 1.1966905366010463 0.0 0.11695134578032394 0.35963079856520713 1.6089268049843886 0.07239342304297545 0.015429737464721554 6.7944203301787595e-12 11.16784758943088 0.1963915819818307 QAIEEEGGDPDNIELTVST(ph)DTPNKKPTK ddPTM_A549_PD325901_60min_R1 1 QAIEEEGGDPDNIELTVSTDTPNKKPTK 28 2 Q9NWH9;H7BXE3;H0YL55;H0YKU6;H0YMW8;H0YNF3;H0YMR6;H0YLE6 Q9NWH9 SLTM SAFB-like transcription modulator 1 QAIEEEGGDPDNIELTVS(0.016)T(0.604)DT(0.38)PNKKPTK 254.01 2.6498999999999997e-138 42190000.0 1861.5 2141.4 1993.3 2120.6 2158.9 1841.7 2165.8 2336.5 2320.1 2315.1 2323.9 True False 2050.4781096361285 2321.8632932439527 2128.577324686635 2251.584645767969 2007.2663118006737 1826.701805813688 2248.220704171235 2289.8966745512084 2222.5942653650836 2168.9241909025613 2038.075032415848 1.0060856823340691 1.1392432841354787 1.0444057705586578 1.1047604283238952 0.9848834217949989 0.8962878092120058 1.1031098798684997 1.1235585727365796 1.0905360352364035 1.06420232641367 1.0 10.992991450445311 -11.024022545229663 1.3665915894735299 1.0005526198689665 1.0591115156187159 0.0 0.07030962804085734 0.9062445937191572 3.0608613372716333 0.04755145450013155 0.01117087873157855 9.461880412841646e-12 11.024022545229663 0.05855889574974937 QAIEEEGGDPDNIELTVSTDT(ph)PNKKPTK ddPTM_A549_MK2206_60min_R1 1 QAIEEEGGDPDNIELTVSTDTPNKKPTK 28 2 Q9NWH9;H7BXE3;H0YL55;H0YKU6;H0YMW8;H0YNF3;H0YMR6;H0YLE6 Q9NWH9 SLTM SAFB-like transcription modulator 1 QAIEEEGGDPDNIELT(0.001)VS(0.001)T(0.027)DT(0.964)PNKKPT(0.006)K 200.66 1.2345999999999997e-77 41341000.0 1228.2 1359.3 1008.8 1028.1 1616.9 1449.6 1227.6 1119.4 1850.8 1809.4 1749.1 True False 1435.4901333929738 1428.482563960273 1151.8630092119147 1279.9845461531631 1379.0561518944792 1602.995709833397 1450.6390296882175 1278.078378018725 1431.5967551202768 1400.6552833171236 1314.750197295799 1.091834887224596 1.0865049245844578 0.8761078808591066 0.9735572192998013 1.0489111579758237 1.2192397560620007 1.1033571492682923 0.9721073863670064 1.0888735807492633 1.065339473763165 1.0 10.36057299797634 -5.56556453739076 24.999996317060777 1.0396669899392352 1.090506717997764 0.051725110088982396 0.08351932415266336 319.8323586481231 187316.99747167103 0.011917457893975218 0.04615615027433446 2.7191643805412504e-06 5.56556453739076 0.05083972805852888 QAIEEEGGDPDNIELTVSTDT(ph)PNKKPTK ddPTM_A549_PD325901_60min_R1 1 QAIEEEGGDPDNIELTVSTDTPNKKPTK 28 2 Q9NWH9;H7BXE3;H0YL55;H0YKU6;H0YMW8;H0YNF3;H0YMR6;H0YLE6 Q9NWH9 SLTM SAFB-like transcription modulator 1 QAIEEEGGDPDNIELTVS(0.001)T(0.004)DT(0.995)PNKKPTK 273.72 2.538199999999999e-153 36138000.0 5046.8 5763.3 5150.2 4262.9 6034.8 4783.5 4915.6 5054.3 4797.2 4727.1 5015.3 True False 5559.147420742207 6248.993517303111 5499.72354266849 4526.209651251658 5610.936466929787 4744.544761964372 5102.665847919531 4953.488021478357 4595.590366712375 4428.630099268068 4398.4498946061385 1.2638878591204241 1.4207263165521817 1.2503776726916576 1.029046541328615 1.2756622449673765 1.078685645091161 1.1601054849293564 1.1261894849712548 1.0448204428446466 1.0068615547261184 1.0 12.102779462188652 -2.4856392440061557 0.17180078808404503 0.9671704869457078 2.3682027955173104 0.6072089989433884 0.08161990754001605 19.63649046802434 0.23246169907561065 0.09513121318221318 6.924618795159591 0.0032685923204194404 2.4856392440061557 1.4010323085716025 QAISGT(ph)SPVASSFQGIK ddPTM_A549_PD325901_60min_R1 1 QAISGTSPVASSFQGIK 17 0 P51587;A0A590UJI7 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 QAIS(0.001)GT(0.622)S(0.377)PVASSFQGIK 148.33 1.7296e-16 2722900.0 1812.5 1595.9 1804.4 1699.8 2092.1 1696.2 1578.8 2329.2 2290.4 2133.9 2266.1 True False 1996.503665708023 1730.3920938115361 1926.8574347386573 1804.7927854741076 1945.1581133531845 1682.3867095733183 1638.882097952509 2282.742278777949 2194.1424530805525 1999.165189826347 1987.3840659914604 1.0045887455135718 0.8706883200999618 0.969544572542093 0.9081248141001562 0.9787529982951683 0.8465332586502419 0.8246428689841127 1.1486165748436457 1.104035445703317 1.005927955263649 1.0 10.956654987928225 -8.261295185629157 24.99999968851011 1.0579621931650822 0.9147027200600948 0.5518354956124942 0.06490279958390947 8.311834949586945 1441130.2463877653 0.01111419050720582 0.013898504194789047 5.479044331518739e-09 8.261295185629157 -0.14325947310498743 QAISGTS(ph)PVASSFQGIK ddPTM_A549_MK2206_60min_R1 2 QAISGTSPVASSFQGIK 17 0 P51587;A0A590UJI7 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 QAIS(0.069)GT(0.188)S(0.742)PVAS(0.001)SFQGIK;QAIS(0.002)GT(0.105)S(0.893)PVASSFQGIK 107.98 8.6929e-09 3238100.0 2044.3400000000001 2240.3 2052.5 2106.39 2747.2 2128.09 2254.87 2116.51 3200.6000000000004 3299.2 3029.6000000000004 True False 2389.3746126857113 2354.321700905026 2343.5753632111955 2622.4556445594403 2343.090519193833 2353.283071288187 2664.5506914899565 2416.531774040032 2475.6692103079527 2553.908428606087 2277.266707293668 1.0492291504692808 1.033836613587932 1.0291176504294175 1.151580373155325 1.028904744310073 1.033380527520581 1.1700652729677596 1.0611544823890515 1.087123085925262 1.1214797197124018 1.0 11.153087550557803 -10.77420584172415 0.9959118117521529 0.9995344062480465 1.0724492201759517 0.0 0.05831342741471549 0.6193374444375215 1.0792990616578166 0.03211157910982114 0.007911073296318273 1.6818767162400747e-11 10.77420584172415 0.07291481392790522 QAISGTS(ph)PVASSFQGIK ddPTM_A549_PD325901_60min_R1 1 QAISGTSPVASSFQGIK 17 0 P51587;A0A590UJI7 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 QAIS(0.003)GT(0.126)S(0.87)PVAS(0.001)SFQGIK 146.78 2.0798999999999998e-16 3642500.0 1837.3 2091.6 1998.3 1993.6 2314.7 1597.0 2161.0 2669.9 1932.4 2195.6 2021.9 True False 2023.8213434512277 2267.8664724708397 2133.9166547540767 2116.7401442058945 2152.123457281497 1583.9945614836627 2243.2380375445755 2616.646750003967 1851.1879481020162 2056.969441296559 1773.2191178801181 1.1413261469178746 1.2789544448302994 1.2034139679844937 1.1937273419071048 1.2136816232019643 0.8932875500334819 1.2650653350875016 1.4756477209269918 1.0439702174625265 1.1600198873084926 1.0 10.792155106711782 -8.96733333437147 24.999336784728015 1.0193984051419092 1.2050956727940791 0.1511058517295344 0.1361473907904594 162.5110834549159 124368.30795719578 0.022533530893202026 0.023828521180978963 1.0781189151621353e-09 8.96733333437147 0.18569726765216998 QALAPGLS(ph)PSQRPGGSSSACSR ddPTM_A549_PD325901_60min_R1 1 QALAPGLSPSQRPGGSSSACSR 22 1 Q9BWK5-3;Q9BWK5-2;Q9BWK5 Q9BWK5-3 MRI Modulator of retrovirus infection homolog 1 QALAPGLS(0.957)PS(0.039)QRPGGS(0.001)S(0.001)S(0.001)ACS(0.001)R 58.477 0.00082504 10967000.0 3706.4 3670.4 3578.5 3865.6 3778.6 3570.4 3926.5 4260.8 4523.7 4601.0 3825.5 True False 4082.6709994925336 3979.7174892699195 3821.3585292686125 4104.369332585428 3513.204171462333 3541.3238461623478 4075.925106163245 4175.815001467063 4333.584620590504 4310.492074788426 3354.9877518425196 1.2168959476082675 1.1862092453494966 1.1390081907661116 1.2233634326478113 1.0471585684725444 1.0555400222303328 1.214885241808944 1.2446587917269607 1.2916841851987537 1.2848011359866083 1.0 11.712091784205784 -11.036362602534123 1.3588010735653786 1.0008952723519586 1.188908600421153 0.0 0.10977247341670143 0.34019973692116 1.1281934338016857 0.057623682190682014 0.013193377864222573 9.196813877926429e-12 11.036362602534123 0.18801332806919446 QALDS(ph)EEEEEDVAAK ddPTM_A549_MK2206_60min_R1 2 QALDSEEEEEDVAAK 15 0 Q8NC44;H7C3D5 Q8NC44 FAM134A Protein FAM134A 1 QALDS(1)EEEEEDVAAK;QALDS(1)EEEEEDVAAK 246.12 3.643099999999999e-65 168055000.0 18266.1 20038.3 16568.6 15631.0 25959.0 20172.6 18524.2 19929.1 27886.0 23145.4 23054.0 True False 21348.971116731307 21058.163879500604 18918.27662017103 19460.595701702267 22140.465487679357 22307.25114251185 21889.80735887136 22754.110955309057 21569.865524791465 17916.83806482157 17329.055541968646 1.231975456771257 1.2151939745648894 1.091708464685424 1.1230038275641345 1.277649865802445 1.2872744904352509 1.263185250105361 1.3130612283053542 1.244722510846142 1.033918901202053 1.0 14.080905407270363 -10.623624295411236 0.9207911012141705 1.0011451838924732 1.2262083882044046 0.608962227886823 0.06466842383815105 0.3239478773161279 0.4935900240772095 0.04742426109251829 0.013125352807864797 2.3788973612830826e-11 10.623624295411236 0.2250632043119314 QALDS(ph)EEEEEDVAAK ddPTM_A549_PD325901_60min_R1 2 QALDSEEEEEDVAAK 15 0 Q8NC44;H7C3D5 Q8NC44 FAM134A Protein FAM134A 1 QALDS(1)EEEEEDVAAK;QALDS(1)EEEEEDVAAK 293.08 1.8731999999999996e-123 217930000.0 41223.0 44756.0 45812.0 38179.5 48363.0 35357.5 42423.0 42122.9 43863.8 47150.0 44635.0 True False 45407.92861323132 48527.74519119564 48921.07780993532 40537.7610030643 44966.14972329246 35069.56024274175 44037.43047975632 41282.72571472419 42020.35702647343 44172.94095333066 39145.177964577415 1.1599877934983738 1.239686411315042 1.2497344591000237 1.0355748296698775 1.1487021406310238 0.895884552485016 1.1249771432794589 1.054605646500855 1.0734491248065796 1.1284388844343198 1.0 15.256546981955928 -6.266392107383028 24.890989534180854 1.0415265450501963 1.2187912443243454 0.49012188555531033 0.07072217476147512 188.4538588703178 947117.1107000603 0.00880041486904767 0.0210516922031005 5.415117599858981e-07 6.266392107383028 0.17726469927414912 QALDS(ph)EEEEEDVAAKETLLR ddPTM_A549_MK2206_60min_R1 3 QALDSEEEEEDVAAKETLLR 20 1 Q8NC44;H7C3D5 Q8NC44 FAM134A Protein FAM134A 1 QALDS(1)EEEEEDVAAKETLLR;QALDS(1)EEEEEDVAAKETLLR;QALDS(0.994)EEEEEDVAAKET(0.006)LLR 122.73 4.1201e-15 75228000.0 3896.2999999999997 5439.6 4490.28 3868.8 5362.700000000001 4807.9 4206.8 3247.87 6816.3 6688.7 6627.599999999999 True False 4553.900184610843 5716.4524055898655 5127.069223834334 4816.656173677034 4573.853933925734 5316.668786774276 4971.121106298794 3708.2655186847214 5272.418933394399 5177.718024496099 4981.784007545387 0.9141103222687951 1.1474709455351242 1.0291632909152422 0.9668536745835926 0.9181156643881381 1.0672218584189266 0.9978596219285214 0.7443649730835781 1.058339527648894 1.0393300907172915 1.0 12.282446757465602 -3.9659530570263497 15.677117805994389 1.0040682732338801 1.0042455157885692 0.0 0.1016846010753242 0.0 0.0 0.012776129015248402 0.0 0.00010815508500183528 3.9659530570263497 0.00017724255468909433 QALDS(ph)EEEEEDVAAKETLLR ddPTM_A549_PD325901_60min_R1 2 QALDSEEEEEDVAAKETLLR 20 1 Q8NC44;H7C3D5 Q8NC44 FAM134A Protein FAM134A 1 QALDS(1)EEEEEDVAAKETLLR;QALDS(1)EEEEEDVAAKETLLR 197.1 2.7757999999999997e-55 106983000.0 5338.9 5536.5 6105.7 5412.6 6105.9 6533.8 6980.5 7998.8 6156.3 7494.8 6182.0 True False 5880.901197709552 6003.080285348443 6520.069518556755 5746.924009093512 5677.042648211466 6480.590899074488 7246.14674737617 7839.257659062787 5897.5721201099395 7021.577048929427 5421.653190926793 1.084706267739758 1.107241661158754 1.2025980432441115 1.0599947666721035 1.0471054581123098 1.1953163861384275 1.3365197832097948 1.4459164728909415 1.0877811457913986 1.2950988935773553 1.0 12.404517115334498 -8.984429066389028 19.03898983436389 1.0387237645600456 1.1850204865947982 0.0 0.13798087547785626 7.797908722507808 9536.324817271901 0.022348617608632163 0.022657824300149357 1.0365038834855888e-09 8.984429066389028 0.14629672203475264 QALDYVELSPLTQAS(ph)PQR ddPTM_A549_MK2206_60min_R1 3 QALDYVELSPLTQASPQR 18 0 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 QALDYVELSPLT(0.001)QAS(0.999)PQR;QALDYVELSPLTQAS(1)PQR;QALDYVELS(0.002)PLT(0.016)QAS(0.982)PQR 289.68 4.988699999999999e-133 32689300.0 4290.54 5974.62 5769.81 4415.13 8168.44 6255.51 5879.09 5846.38 9787.7 9384.58 9712.6 True False 5014.678258368249 6278.702638334678 6588.055817982746 5496.8370482027185 6966.8732966670395 6917.463916128524 6947.244552826413 6675.1222687878435 7570.801577745164 7264.596860126129 7300.693365876839 0.6868769864800325 0.8600145662439534 0.9023876894727652 0.7529198629125726 0.9542755663770154 0.9475078008974442 0.9515869527266503 0.9143134678121271 1.0369976108201997 0.9950557427984273 1.0 12.833817771669707 -4.203534058097126 0.2664379188985268 1.0274898783707949 0.27930716323458743 0.6758295980485063 0.05785676658548135 5.970144759450768 0.2008131983794262 0.026520724490870843 1.6229417213322646 6.258437822844101e-05 4.203534058097126 -0.7481827151362075 QALDYVELSPLTQAS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 QALDYVELSPLTQASPQR 18 0 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 QALDYVELSPLT(0.002)QAS(0.998)PQR;QALDYVELSPLTQAS(1)PQR 231.39 1.7173e-64 44108000.0 5579.4 5816.1 5541.3 6198.6 6487.0 5219.2 5738.9 6525.7 6783.1 6115.299999999999 7324.0 True False 6145.816580662804 6306.243158604727 5917.365940543848 6581.473443957998 6031.375498935096 5176.696565620244 5957.296979946577 6395.539794187388 6498.029895865651 5729.178914356374 6423.194430661248 0.9568162145809607 0.9817923506256869 0.9212496997284066 1.024641790779554 0.9389993661322479 0.8059380144105834 0.9274663945262657 0.9956945665007664 1.0116508173638923 0.8919516567968149 1.0 12.649075252273612 -8.317377635271223 5.483264405172241 1.005218299001085 0.936304874464563 0.0011671498842850125 0.060711970909859636 0.21323147388988387 14.12839466769928 0.0085765515006565 0.010446926861083346 4.815289081626277e-09 8.317377635271223 -0.06891342453652194 QALEREDS(ph)IR ddPTM_A549_MK2206_60min_R1 1 QALEREDSIR 10 1 Q9ULJ7-2;Q9ULJ7 Q9ULJ7-2 ANKRD50 Ankyrin repeat domain-containing protein 50 1 QALEREDS(1)IR 58.32 0.003187 3656200.0 530.18 569.3 344.61 499.53 658.13 379.7 498.45 389.0 741.48 582.0 633.6 True False 619.6614223434996 598.2749383230954 393.4808798617345 621.9148724247539 561.319948819539 419.87960197553883 589.0119129586933 444.14194126253716 573.5359639002504 450.52579578344506 476.2596335295969 1.3011000276280837 1.256194932770669 0.8261898598157843 1.3058315856325986 1.1786007238521425 0.8816191262395654 1.2367454041684796 0.9325626401947336 1.2042506303751404 0.94596678799873 1.0 8.895604464752992 -5.550943543338418 24.999964900373573 1.0867564921796677 1.2898743887402693 0.22405313355678613 0.15194415936008074 193.7992901193926 172634.97829934387 0.018913387505786916 0.0732538256793028 2.812266390771303e-06 5.550943543338418 0.20311789656060153 QALEREDS(ph)IR ddPTM_A549_PD325901_60min_R1 1 QALEREDSIR 10 1 Q9ULJ7-2;Q9ULJ7 Q9ULJ7-2 ANKRD50 Ankyrin repeat domain-containing protein 50 1 QALEREDS(1)IR 49.483000000000004 0.0081084 5196900.0 802.81 949.15 1020.0 1046.9 1205.1 883.15 1074.5 524.82 830.29 998.45 1146.8 True False 884.310680202514 1029.1382015422148 1089.2233337582745 1111.5646353175928 1120.4579333693048 875.9579192074494 1115.3906854889615 514.352053386675 795.3957987112516 935.4076966034567 1005.7508701641614 0.8792542034372532 1.0232536029267727 1.082995169152067 1.1052087234447634 1.1140511697359214 0.870949203419007 1.1090128963118913 0.5114109951530255 0.7908477360615407 0.9300590477747008 1.0 9.974057270829435 QALLDS(ph)PLNKEVVK ddPTM_A549_PD325901_60min_R1 1 QALLDSPLNKEVVK 14 1 A0A087WV20;A0A087WTU9;Q8TCU4-3;Q8TCU4-2;Q8TCU4 A0A087WV20 ALMS1 Alstrom syndrome protein 1 1 QALLDS(1)PLNKEVVK 52.52 0.006051699999999999 1567100.0 2515.5 2181.8 2514.8 2839.2 2484.3 3163.7 2704.1 2987.2 2715.0 3298.0 3165.6 True False 2770.8717081867753 2365.667943027767 2685.4694507208887 3014.5709357089563 2309.811338369734 3137.9358761213916 2807.0060052402973 2927.6179525869356 2600.8979916668245 3089.7637171598003 2776.2512683917594 0.9980622934724132 0.8521087302008375 0.967300575886469 1.0858422542766641 0.8319892960221044 1.1302780522236917 1.0110777929932666 1.0545219684970593 0.9368381101806702 1.1129265395886352 1.0 11.438922431561613 -5.985643149043959 24.669399843614745 0.9876762784571216 0.9212402716242615 0.07330026710022097 0.08961080129252304 349.1384653059914 599915.4862765583 0.010408675731262402 0.032341589426556606 1.033610353568809e-06 5.985643149043959 -0.0664360068328601 QALLQYK ddPTM_A549_MK2206_60min_R1 2 QALLQYK 7 0 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 0 ; 94.40700000000001 0.033311 2377500.0 3328.9 4078.5 3766.4 3360.4 4808.8 3827.2 3951.47 3397.4 5587.6 4622.8 4953.3 False True 3890.7369362089803 4286.078229318015 4300.532154932348 4183.698150854087 4101.43189017884 4232.19176371025 4669.400950343843 3878.991854101141 4322.017521563684 3578.5062693259647 3723.2589058746116 1.0449815697936342 1.1511630906342232 1.1550451536278894 1.12366565329448 1.1015704236166712 1.136690160609738 1.2541166403916726 1.041827053171299 1.1608157345019283 0.9611220599458571 1.0 11.862350225652525 -10.833327978851608 0.8755853460821039 0.9925103622853149 1.133748235226687 0.4980613033973914 0.05676566051617093 0.4859533350101579 0.6010800686319929 0.04730531165101045 0.00940540546356186 1.4678173644506763e-11 10.833327978851608 0.14123787294137213 QALLQYK ddPTM_A549_PD325901_60min_R1 1 QALLQYK 7 0 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 0 122.78 0.017555 1970600.0 2691.1 2557.2 3365.3 2764.9 3449.1 3184.9 3105.3 3740.8 3784.2 3165.9 3190.0 False True 2964.2984909168863 2772.704218494181 3593.6894951928616 2935.681593456502 3206.847114749041 3158.9632303502317 3223.4738907853634 3666.1868093991707 3625.16323390998 2966.004533704126 2797.650223076102 1.0595672276920842 0.9910832296417341 1.2845385264929545 1.0493383230118847 1.1462644930726953 1.1291487421457764 1.1522076148751201 1.3104521713111392 1.2957885885834586 1.060177040446076 1.0 11.449999885128506 -5.729261459970949 24.997853949950734 1.1554576381331585 1.025325099848442 0.21164177522522243 0.09909456749808523 291.0656445235422 226114.39865903067 0.01670711507515534 0.06469614619948058 1.8652564052802043e-06 5.729261459970949 -0.1301325382847165 QALVGS(ph)DSAEDEKR ddPTM_A549_PD325901_60min_R1 1 QALVGSDSAEDEKR 14 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QALVGS(0.601)DS(0.399)AEDEKR 72.77199999999999 0.00052911 33735000.0 6263.5 6884.2 6890.5 6652.6 8195.7 7275.0 6500.1 8687.3 7004.2 8153.2 8328.3 True False 6899.365909055001 7464.355694102001 7358.130765942533 7063.515992849189 7620.062305630088 7215.754812018561 6747.464862491199 8514.024986444987 6709.837831761609 7638.405560566183 7303.971897443487 0.9446046624946483 1.0219584356170168 1.0074149886198223 0.9670787472938578 1.0432765093602343 0.9879220393145538 0.9238076155321634 1.1656705565125516 0.9186560307153105 1.0457879175630116 1.0 12.834465499122103 QALYLMFDT(ph)SQESPVKSSPVR ddPTM_A549_MK2206_60min_R1 1 QALYLMFDTSQESPVKSSPVR 21 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALY(0.001)LMFDT(0.305)S(0.305)QES(0.305)PVKS(0.038)S(0.045)PVR 48.388999999999996 0.0040924 4988300.0 1254.0 1592.1 1918.3 1691.9 2584.1 1679.9 1573.2 1955.4 2587.0 2197.1 1790.4 True False 1465.6445426435346 1673.1310895910774 2190.343785260918 2106.4155759522764 2203.982313136572 1857.6659029726286 1859.0300761693582 2232.58393816135 2001.0486305900997 1700.7735840477787 1345.7942674737856 1.0890554210746655 1.2432294668127408 1.6275472694444237 1.5651839414550834 1.6376814542936837 1.3803490978302995 1.381362754397057 1.6589340526410274 1.4868904400568623 1.2637693777967498 1.0 10.394242165649777 -10.609668091169134 0.8620605769907176 0.9958193313059479 1.4610677586125655 0.27425723580133243 0.18349032425357922 0.4191767742714374 0.5490950602807593 0.12328868555036417 0.032555585607267276 2.4565856399154464e-11 10.609668091169134 0.46524842730661764 QALYLMFDTS(ph)QESPVKSSPVR ddPTM_A549_MK2206_60min_R1 1 QALYLMFDTSQESPVKSSPVR 21 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALYLMFDT(0.061)S(0.458)QES(0.458)PVKS(0.011)S(0.013)PVR 56.303000000000004 0.0016605999999999997 5708300.0 809.78 1039.5 969.12 1016.7 1310.3 956.09 1186.5 988.2 1566.5 1308.9 1405.9 True False 946.4510667798098 1092.4061099365151 1106.5557885482265 1265.7915456413975 1117.5566057439144 1057.2628091988224 1402.071691695235 1128.2803762355763 1211.6902511864678 1013.2185809294699 1056.7762291339334 0.8956021536891126 1.0337156342282432 1.0471051089548913 1.1977857854342162 1.0575148976049478 1.0004604381244342 1.3267441611970054 1.067662524127973 1.1465911304415808 0.9587825246219244 1.0 10.045454205094996 -5.245204348493516 1.7424582152270542 1.0899903186681634 0.8252466441364624 0.24839203057871184 0.09867603107167003 1.0208666385901863 2.915858669402748 0.013381197797111156 0.452352244723755 5.685853315525942e-06 5.245204348493516 -0.264743674531701 QALYLMFDTS(ph)QESPVKSSPVR ddPTM_A549_PD325901_60min_R1 1 QALYLMFDTSQESPVKSSPVR 21 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALY(0.001)LMFDT(0.081)S(0.676)QES(0.225)PVKS(0.008)S(0.009)PVR 66.138 0.00028998 11765000.0 2110.5 2083.3 2514.3 2369.2 2725.9 2745.4 2590.0 3347.8 2778.9 2651.6 2497.3 True False 2324.7564063320183 2258.867002341985 2684.935517714146 2515.5401031564043 2534.442187844487 2723.0423726344675 2688.5638673023823 3281.025502701705 2662.1124968850627 2484.177523475113 2190.147931689015 1.0614609053093482 1.031376451635381 1.2259151442996625 1.1485708644422254 1.1572013703612962 1.2433143593795926 1.227571813027714 1.4980839674018818 1.2154943775108717 1.1342510190895398 1.0 11.096812603395533 -4.284947673992107 12.95439430467456 1.1498737851959329 1.141896861287819 0.0 0.13167690301414933 0.0 0.0 0.019826188082618948 0.0 5.188625503619104e-05 4.284947673992107 -0.007976923908113775 QALYLMFDTSQES(ph)PVK ddPTM_A549_MK2206_60min_R1 1 QALYLMFDTSQESPVK 16 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALYLMFDT(0.135)S(0.135)QES(0.731)PVK 73.156 0.00022912 1751200.0 582.15 575.65 928.14 846.57 985.67 871.5 389.13 589.74 1050.9 920.7 944.05 True False 680.4026877989896 604.948126200053 1059.7642083365847 1053.9796880039721 840.6792487091533 963.7215515451198 459.82988401969374 673.3374510030042 812.8728279424573 712.7132305460788 709.6163305454795 0.958831777836858 0.8525002880571133 1.4934326659618273 1.4852810492590858 1.1846954650309782 1.3580881809812784 0.6479978887552154 0.9488753598517273 1.1455103172690584 1.0043641893052526 1.0 9.470895400831234 QALYLMFDTSQES(ph)PVK ddPTM_A549_PD325901_60min_R1 1 QALYLMFDTSQESPVK 16 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALYLMFDT(0.005)S(0.03)QES(0.965)PVK 79.81 0.00011164 2249600.0 1319.1 1484.7 1365.6 1161.2 2138.0 1335.6 2080.4 1664.8 1750.8 1309.4 1540.2 True False 1453.0140609299046 1609.8208795551038 1458.277828019901 1232.9246867234579 1987.8342556995879 1324.7233164167683 2159.5707604385607 1631.5942579896662 1677.2199645710057 1226.7242605363977 1350.7651641322302 1.0756970193729878 1.1917844213796396 1.0795938974016555 0.9127602039659674 1.4716357132119475 0.9807206697307804 1.5987758773938547 1.207903713624306 1.241681388525073 0.9081698974110575 1.0 10.399561162885487 QALYLMFDTSQES(ph)PVKSSPVR ddPTM_A549_MK2206_60min_R1 1 QALYLMFDTSQESPVKSSPVR 21 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALY(0.002)LMFDT(0.159)S(0.159)QES(0.626)PVKS(0.028)S(0.028)PVR 47.38 0.0035305 6170200.0 1793.1 2151.2 1922.2 1856.3 2962.2 1524.8 1836.1 1711.7 3236.4 3288.1 3018.6 True False 2095.7314429139715 2260.6868914818965 2194.7968639047795 2311.093583332473 2526.4643040026126 1686.1533239196767 2169.6956031366394 1954.3387168614001 2503.3605674688074 2545.315926315373 2268.9983108782235 0.9236372864917698 0.9963369653663999 0.9672977072668141 1.0185523595378774 1.1134712140992014 0.7431267426845485 0.9562350014693715 0.8613222440456408 1.1032888634015214 1.1217795597786056 1.0 11.147839819680042 -8.77461126085639 24.99973805266826 1.0487752929430765 0.9511652763987631 0.25758427577515197 0.09342020545569854 282.8544413141026 536845.336354913 0.016153394078454956 0.017246238179089043 1.6803073966616587e-09 8.77461126085639 -0.09761001654431334 QALYLMFDTSQES(ph)PVKSSPVR ddPTM_A549_PD325901_60min_R1 3 QALYLMFDTSQESPVKSSPVR 21 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALYLMFDT(0.037)S(0.199)QES(0.722)PVKS(0.021)S(0.021)PVR;QALYLMFDT(0.001)S(0.003)QES(0.995)PVKS(0.001)SPVR;QALYLMFDT(0.028)S(0.166)QES(0.797)PVKS(0.004)S(0.005)PVR 125.11 7.130799999999999e-16 19612200.0 5803.5 6266.1 7957.8 6955.099999999999 8887.900000000001 9065.0 9045.7 9980.7 8951.6 8818.3 7986.3 True False 6392.667047689106 6794.166237879864 8497.864162138816 7384.700730821838 8263.644565590446 8991.17764549117 9389.93906349697 9781.627108792318 8575.395382027536 8261.51103305951 7004.035729326865 0.9127119413343546 0.9700359193531454 1.2132810982898166 1.0543493803009993 1.1798404355633745 1.2837138462677835 1.340646939332419 1.3965701328214666 1.2243506049121324 1.17953582082219 1.0 12.773970727998265 -5.669661559379696 5.112003000191351 1.1615414446631487 0.9280649576524364 0.39794685696898224 0.11595387560228744 0.20796302148006504 8.770580512822763 0.02014894052479141 0.0822715617331832 2.1396288277530075e-06 5.669661559379696 -0.23347648701071233 QAPAPTVIRDPPSITPAVKS(ph)PLPGPSEEK ddPTM_A549_MK2206_60min_R1 2 QAPAPTVIRDPPSITPAVKSPLPGPSEEK 29 2 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 QAPAPTVIRDPPS(0.001)IT(0.006)PAVKS(0.992)PLPGPS(0.001)EEK;QAPAPTVIRDPPSIT(0.001)PAVKS(0.998)PLPGPS(0.001)EEK 135.44 3.5073999999999997e-28 129998000.0 6000.5 6692.200000000001 6281.5 5558.2 7849.299999999999 6160.200000000001 5807.4 6588.9 8956.2 9049.0 8972.2 True False 7013.23770186007 7032.804395302694 7172.311154207611 6919.959249517078 6694.678367904834 6812.0682751901895 6862.529407796805 7522.896752659972 6927.635000112508 7004.824615196558 6744.15511987729 1.0398986347733465 1.0427999164157207 1.0634854962141072 1.026067628415253 0.9926637583073035 1.0100699278272436 1.0175521300764014 1.1154691164334978 1.0272057621709265 1.0386511713751938 1.0 12.719422004231529 QAPAPTVIRDPPSITPAVKS(ph)PLPGPSEEK ddPTM_A549_PD325901_60min_R1 2 QAPAPTVIRDPPSITPAVKSPLPGPSEEK 29 2 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 QAPAPTVIRDPPSIT(0.006)PAVKS(0.994)PLPGPSEEK;QAPAPTVIRDPPS(0.001)IT(0.003)PAVKS(0.996)PLPGPSEEK 155.23 2.8526e-46 199757000.0 8043.0 9066.7 11059.0 8449.8 11557.2 9636.2 11163.400000000001 11751.3 11163.8 11702.0 10512.3 True False 8859.51943905634 9830.782628586414 11809.530243169367 8971.724955111844 10745.462142175535 9557.72598207193 11588.22929584688 11516.911102783493 10694.624309160261 10963.13372292418 9219.35374296017 0.9609696824814216 1.0663201459313922 1.2809498987048888 0.9731403312257746 1.1655331210585873 1.036702381592651 1.256945944252933 1.2492102400971132 1.160018869796226 1.1891434072909446 1.0 13.170449909014783 -5.3384993034177874 4.316641807860611 1.109115511556469 0.9590079015602042 0.15236654088842605 0.10418255874931275 0.3062388738253996 9.691949116606434 0.01490217305008929 0.11040369043781803 4.586703814772999e-06 5.3384993034177874 -0.15010760999626482 QAPFRS(ph)PTAPSVFSPTGNR ddPTM_A549_MK2206_60min_R1 2 QAPFRSPTAPSVFSPTGNR 19 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 NELFA Negative elongation factor A 1 QAPFRS(0.709)PT(0.288)APS(0.002)VFSPTGNR;QAPFRS(0.557)PT(0.443)APSVFSPTGNR 141.19 4.4699e-21 37391000.0 6433.6 7590.799999999999 7929.9 6912.8 10410.6 7439.3 6845.3 8055.4 10956.9 11582.4 11712.5 True False 7519.434393581694 7977.139297071765 9054.47906101265 8606.436310327383 8879.214530838433 8226.521788192324 8089.002403001599 9197.277618627866 8475.179644573898 8965.927795673842 8803.96300144477 0.8540965463334774 0.9060850546240007 1.0284549196227617 0.9775638890026034 1.0085474608856617 0.9344112176348667 0.918791049175713 1.0446747239985619 0.9626550728556087 1.0183968054162078 1.0 13.103937366994657 -5.571817455513351 5.098838238488585 0.9823865118753801 0.8649774400814647 0.567070870242851 0.0372290793518888 0.087129438445661 4.907796566360924 0.004755943573724118 0.02045829168651718 2.680294680839481e-06 5.571817455513351 -0.11740907179391535 QAPFRS(ph)PTAPSVFSPTGNR ddPTM_A549_PD325901_60min_R1 2 QAPFRSPTAPSVFSPTGNR 19 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 NELFA Negative elongation factor A 1 QAPFRS(0.928)PT(0.072)APSVFSPTGNR;QAPFRS(0.913)PT(0.087)APSVFSPTGNR 174.28 7.998399999999999e-35 57202000.0 12179.5 11918.0 13209.6 10948.1 14268.400000000001 12225.4 12658.6 15378.0 14519.5 14742.9 15213.4 True False 13415.953873925988 12922.37168622464 14106.082891777745 11624.33927206088 13266.236807307778 12125.840395718444 13140.329950051702 15071.273726192383 13909.295907921349 13812.03077796095 13342.248245688399 1.00552422851684 0.9685302992620121 1.0572493205060987 0.8712429163366326 0.9943029512732096 0.9088303689475241 0.9848662465336794 1.1295902645989762 1.0425001582785116 1.03521014776684 1.0 13.703714168981469 -8.016149597306951 24.667001072620014 1.0301959559458114 0.9667525942314443 0.3122303159766793 0.05551389843690528 684.054387644635 1044828.7681535083 0.008724610410474296 0.011430215011717159 9.634970797427525e-09 8.016149597306951 -0.06344336171436704 QAPGS(ph)DSQPR ddPTM_A549_MK2206_60min_R1 2 QAPGSDSQPR 10 0 Q9NXE4-3;Q9NXE4-6;Q9NXE4-2;Q9NXE4;Q9NXE4-4;H7C1Q6;Q9NXE4-10;Q9NXE4-8;H7C2E2;H7C2J2;H7C0W5;Q9NXE4-9;Q9NXE4-7 Q9NXE4-3 SMPD4 Sphingomyelin phosphodiesterase 4 1 QAPGS(0.576)DS(0.424)QPR;QAPGS(0.801)DS(0.199)QPR 72.652 0.0020312999999999998 6300500.0 2716.14 1776.09 1186.47 1021.45 1283.92 1122.3700000000001 965.3700000000001 918.8100000000001 1066.1000000000001 2277.99 2626.06 True False 3174.5580287526373 1866.485394706248 1354.7292868156815 1271.7052958546328 1095.05706879854 1241.1384484310913 1140.7652330483174 1049.054131237613 824.6300522118695 1763.3904768672346 1973.9368264310824 1.6082368930176465 0.9455649085188259 0.6863083299707515 0.6442482245766201 0.5547579102510719 0.6287630038672993 0.5779137497074027 0.5314527380971579 0.41775908994150396 0.8933368349257054 1.0 10.946860103406248 -5.262767866878078 2.0030638585317915 0.6710962800846992 1.8852175943965903 0.7592222340703746 0.15576964170323504 0.3743980311203824 1.5849686110389283 0.030347157165686516 0.8292077895537029 5.4604965006238254e-06 5.262767866878078 1.2141213143118912 QAPGS(ph)DSQPR ddPTM_A549_PD325901_60min_R1 1 QAPGSDSQPR 10 0 Q9NXE4-3;Q9NXE4-6;Q9NXE4-2;Q9NXE4;Q9NXE4-4;H7C1Q6;Q9NXE4-10;Q9NXE4-8;H7C2E2;H7C2J2;H7C0W5;Q9NXE4-9;Q9NXE4-7 Q9NXE4-3 SMPD4 Sphingomyelin phosphodiesterase 4 1 QAPGS(0.831)DS(0.169)QPR 69.979 0.0033395000000000005 3128000.0 830.2 721.59 480.72 550.1 630.67 426.72 469.59 620.83 487.31 854.6 964.26 True False 914.4812928390621 782.4009217203256 513.3445500041938 584.0784276322546 586.3739148933864 423.24493379856517 487.46050441950797 608.447058618287 466.8300553661734 800.6404101530512 845.6621329477628 1.081379025038538 0.925193279014487 0.6070326788960095 0.6906758679099252 0.6933902938865624 0.5004894003273401 0.5764246564054427 0.7194919045238499 0.5520290399416641 0.9467615717428693 1.0 9.723937568863501 -5.558340553528727 4.7200455748128975 0.724902859346326 1.0513031533740174 0.38961234477828 0.149210639363139 0.17772929766812476 9.1794474298837 0.026015271111624612 0.11825367615399135 2.7647727889644403e-06 5.558340553528727 0.32640029402769133 QAPGVGAVGGGS(ph)PEREEVGAGYNS(ph)EDEYEAAAAR ddPTM_A549_MK2206_60min_R1 2 QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 34 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 2 QAPGVGAVGGGS(0.993)PEREEVGAGY(0.016)NS(0.988)EDEY(0.002)EAAAAR;QAPGVGAVGGGS(1)PEREEVGAGYNS(1)EDEYEAAAAR 263.8 2.150399999999999e-168 107643000.0 3132.42 4058.7799999999997 2695.8599999999997 2915.25 5761.01 4086.06 3386.57 3035.65 5148.55 4993.3 4855.780000000001 True False 3661.095915683781 4265.354565548943 3078.1734853430125 3629.486380870546 4913.573060563803 4518.4441570928875 4001.8659325278836 3465.9626837882247 3982.4116455449007 3865.310062002539 3649.95581328969 1.0030521197964999 1.1686044389958237 0.8433454109595556 0.9943918684317729 1.3462006971901448 1.2379448925493792 1.0964148984918858 0.9495903131672071 1.0910848923279346 1.05900187830459 1.0 11.833663283357836 -3.5160903811584747 11.127076742829988 1.0616854375101434 0.7846657938177155 0.0 0.1340063546443293 0.0 0.0 0.017645994107041367 0.0 0.00030472607572597926 3.5160903811584747 -0.27701964369242793 QAPGVGAVGGGS(ph)PEREEVGAGYNS(ph)EDEYEAAAAR ddPTM_A549_PD325901_60min_R1 2 QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 34 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 2 QAPGVGAVGGGS(1)PEREEVGAGYNS(1)EDEYEAAAAR;QAPGVGAVGGGS(1)PEREEVGAGYNS(1)EDEYEAAAAR 255.91 1.5799999999999997e-149 195115000.0 4764.6 4506.7 4225.0 3802.3 5474.2 4872.0 5346.9 5471.5 6046.9 5114.8 5294.0 True False 5248.298684486863 4886.495425265028 4511.733906988928 4037.1594353501605 5089.711076964778 4832.3240473064525 5550.3792054359465 5362.366640191286 5792.769821661186 4791.850655102771 4642.871561431004 1.1303992830827432 1.052472669254485 0.9717550544513324 0.8695393318409709 1.0962420583084256 1.0408050240823497 1.1954625778459473 1.1549676895517056 1.2476696253634392 1.032087705141223 1.0 12.180801655971674 -7.350346292111649 2.2394263827009837 1.1277581519326974 1.01035046589606 0.21384952026410098 0.09111212636833008 0.407819598811201 3.9960522926272897 0.017246013115134896 0.030053881304008753 4.463275633326617e-08 7.350346292111649 -0.11740768603663732 QAPGVGAVGGGS(ph)PEREEVGAGYNSEDEYEAAAAR ddPTM_A549_MK2206_60min_R1 2 QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 34 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 QAPGVGAVGGGS(1)PEREEVGAGYNSEDEYEAAAAR;QAPGVGAVGGGS(1)PEREEVGAGYNSEDEYEAAAAR 166.73 1.7388000000000003e-52 22176000.0 1758.34 2049.55 1463.8600000000001 1365.62 2683.2 2352.1000000000004 1566.73 1031.15 2813.9 2598.5 2605.5 True False 2055.1048047143786 2153.8633406641507 1671.4573598978518 1700.1969613050103 2288.5048344135457 2600.9976608023812 1851.3845609183948 1177.3186702644343 2176.556142874945 2011.497045263373 1958.4824418582161 1.0493353224880009 1.0997613737198257 0.8534451594633476 0.8681195832891188 1.1685092424123051 1.3280678984972385 0.9453158840483622 0.6011382308576582 1.1113483053796591 1.027069225780169 1.0 10.935520478992295 QAPGVGAVGGGS(ph)PEREEVGAGYNSEDEYEAAAAR ddPTM_A549_PD325901_60min_R1 2 QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 34 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 QAPGVGAVGGGS(1)PEREEVGAGYNSEDEYEAAAAR;QAPGVGAVGGGS(1)PEREEVGAGYNSEDEYEAAAAR 139.69 5.852e-31 21455000.0 2497.6 2749.9 2422.1 2371.5 2339.8 3258.1 2237.0 3348.4 3226.0 2666.5 2810.7 True False 2751.154513364059 2981.6437237748914 2586.4782712705064 2517.9821689327237 2175.460519871797 3231.5671138196108 2322.130259133369 3281.6135352310157 3090.422438717193 2498.1367349322645 2465.001718495299 1.1160862455882727 1.2095909310744677 1.0492805144368662 1.0214930683576826 0.8825391493843479 1.310979659597253 0.9420400163253668 1.3312824533178005 1.25372019643202 1.013442187966178 1.0 11.267372937051798 -7.264174869881291 24.99228488277035 1.1373581702485616 1.0620741305539227 0.08568068207296209 0.13895212665135726 625.3525077898147 5713408.418555868 0.022037674637303047 0.036175275161186314 5.442834514684992e-08 7.264174869881291 -0.07528403969463882 QAPGVGAVGGGSPEREEVGAGYNS(ph)EDEYEAAAAR ddPTM_A549_MK2206_60min_R1 2 QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 34 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 QAPGVGAVGGGSPEREEVGAGY(0.004)NS(0.996)EDEYEAAAAR;QAPGVGAVGGGSPEREEVGAGYNS(1)EDEYEAAAAR 184.5 1.1627e-76 22973000.0 1563.6100000000001 1533.35 1726.95 1571.77 2321.8 1612.25 1379.73 1834.42 2600.8 2211.57 2888.4 True False 1827.509141405786 1611.3909655326158 1971.857477952534 1956.8537205594362 1980.266295669861 1782.857224875065 1630.409081485602 2094.454652675638 2011.7229526241717 1711.9748009979282 2171.130564215417 0.8417315713420461 0.7421898029034129 0.9082169034201338 0.9013063298966479 0.9120899167966304 0.8211653662198511 0.7509493479378953 0.9646838781584343 0.9265785235496187 0.7885176641214969 1.0 11.084230771869036 -8.955734510768039 0.8073492530144736 0.9827488144926294 0.8449013664781151 0.0 0.0850493457520017 0.36672996111032397 0.5014092338899636 0.01713641931449192 0.015809867902610228 1.107300482691748e-09 8.955734510768039 -0.13784744801451432 QAPGVGAVGGGSPEREEVGAGYNS(ph)EDEYEAAAAR ddPTM_A549_PD325901_60min_R1 2 QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 34 1 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 QAPGVGAVGGGSPEREEVGAGYNS(1)EDEYEAAAAR;QAPGVGAVGGGSPEREEVGAGYNS(1)EDEYEAAAAR 160.07 1.8048999999999998e-51 33144000.0 2519.5 2603.5 2647.9 2654.1000000000004 2960.2 2934.1 2483.7 2780.7 2511.3 3049.0 3228.0 True False 2775.2777852421314 2822.9060819840442 2827.6024171162094 2818.037729101559 2752.2857641356054 2910.205662397753 2578.218562632789 2725.23675708305 2405.7587942809937 2856.4856196544038 2830.9764639779523 0.980325276651168 0.9971492585344324 0.998808168522531 0.9954295858545527 0.972203689842135 1.02798652670834 0.9107170601517471 0.9626490335612604 0.8497982321267824 1.0090107268644004 1.0 11.467084039754056 -7.769614343356219 24.998000140863113 0.929070804656923 0.9945135567317325 0.19235545015132904 0.04370932303068966 194.932519299703 596078.3554066847 0.008461503696668463 0.01180035981472942 1.6997523748977698e-08 7.769614343356219 0.06544275207480943 QAPLPS(ph)PESLDLGR ddPTM_A549_MK2206_60min_R1 2 QAPLPSPESLDLGR 14 0 H3BRS1;Q12968 H3BRS1 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 1 QAPLPS(0.997)PES(0.003)LDLGR;QAPLPS(0.994)PES(0.006)LDLGR 73.156 0.0010860999999999998 5867300.0 3089.3 3635.1000000000004 3106.7 2796.3 5049.0 3633.8999999999996 3696.2 4008.7999999999997 4481.7 5090.4 4800.299999999999 True False 3610.6983138665632 3820.111063232539 3547.2767750977937 3481.3936255306776 4306.298788369857 4018.4368860124046 4367.751695612245 4577.059676435109 3466.6021058042734 3940.475104563657 3608.253028459792 1.0006776923312983 1.0587148498460985 0.9831008931798704 0.9648418772385081 1.1934580957611032 1.1136793496235773 1.21048930359428 1.2684974253008137 0.9607425195688166 1.0920728323328468 1.0 11.817084795679035 QAPLPS(ph)PESLDLGR ddPTM_A549_PD325901_60min_R1 2 QAPLPSPESLDLGR 14 0 H3BRS1;Q12968 H3BRS1 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 1 QAPLPS(0.715)PES(0.285)LDLGR;QAPLPS(0.989)PES(0.011)LDLGR 87.083 8.153300000000001e-05 10168500.0 2512.5 2671.5 2450.0 2697.2 3353.8 2424.8 2759.6 2892.1 2541.6 2676.1 2717.8 True False 2767.5671503952585 2896.6366806300634 2616.271733046834 2863.7999182143562 3118.240657981889 2405.0532327398773 2864.6180881110618 2834.414796691441 2434.7853906520836 2507.130589293918 2383.527829553678 1.1611222307035083 1.2152728592946473 1.0976468160376955 1.2014963210018865 1.3082459618546964 1.0090309007175426 1.2018395810580778 1.1891679054664919 1.021504914044995 1.0518570659036042 1.0 11.218882754762225 -8.783327218296126 7.618521321740597 1.0099153024148158 1.1728856295744614 0.45603579843858233 0.07177481984108106 0.09441482707735531 23.269312670593724 0.011584179617418457 0.012461850832054717 1.6469210546161522e-09 8.783327218296126 0.16297032715964566 QAPPHIELSNS(ph)SPDPMAEAER ddPTM_A549_MK2206_60min_R1 1 QAPPHIELSNSSPDPMAEAER 21 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 QAPPHIELS(0.003)NS(0.498)S(0.498)PDPMAEAER 62.646 0.00042372 8722100.0 2234.0 2313.3 2139.8 1846.2 2641.2 2407.2 1921.6 2302.0 2681.0 2488.5 3409.8 True False 2611.0445839439026 2431.0370890968156 2443.255815931457 2298.5190828790683 2252.6829787764827 2661.9283062299614 2270.7298464067117 2628.315549579331 2073.7577806772547 1926.3461216616909 2563.052554307481 1.0187245593367822 0.9484928762038846 0.953260131878805 0.896789681123067 0.8789062772008365 1.038577340818201 0.8859474389592636 1.0254629953498882 0.80909686272023 0.7515827634608048 1.0 11.323647345445869 QAPPHIELSNS(ph)SPDPMAEAER ddPTM_A549_PD325901_60min_R1 1 QAPPHIELSNSSPDPMAEAER 21 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 QAPPHIELS(0.007)NS(0.617)S(0.376)PDPMAEAER 73.655 7.6534e-05 6510700.0 1294.7 1741.1 1506.2 1836.2 2242.9 1478.0 1533.9 1937.7 1379.9 1846.2 2307.2 True False 1426.1369908922354 1887.8286073909824 1608.4197895163845 1949.617903687233 2085.366441584942 1465.9636580293381 1592.2734038822862 1899.051053403757 1321.9076017315108 1729.6306169255374 2023.4290265458271 0.7048119663118493 0.9329848403992075 0.7948980509892654 0.9635217633580179 1.0306101248062294 0.7244947259315876 0.7869183366418531 0.9385310917702933 0.6533007011311508 0.8548017223406992 1.0 10.982586530829735 -7.288987315637733 24.975604609150633 0.8298894796741877 0.8873270156664943 0.0569473809109583 0.11900136740326854 2414.326940364751 2188880.25470079 0.02222306226403978 0.03553122864429913 5.14058665383865e-08 7.288987315637733 0.05743753599230661 QAPRPS(ph)FSTR ddPTM_A549_MK2206_60min_R1 2 QAPRPSFSTR 10 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 QAPRPS(0.994)FS(0.005)T(0.001)R;QAPRPS(0.994)FS(0.006)TR 90.73100000000001 0.00018286 13314100.0 2659.3 2722.1 2659.5 2409.5 3595.2 2343.9 2316.3 2391.0 3772.5 3831.5 3610.0 True False 3108.1248263572184 2860.6432629708393 3036.6570906017923 2999.8276081665645 3066.350842532641 2591.9299422451013 2737.141727327158 2729.9315721304006 2918.034773444591 2965.9614889076825 2713.53736906857 1.1454144180163222 1.0542118548206187 1.1190769381754024 1.1055044394676106 1.130019758521024 0.9551849080061827 1.00869874081251 1.006041635264989 1.0753619267260046 1.0930240072300008 1.0 11.40595906133528 -7.236796226312234 24.868402865496453 1.0266881400552552 1.1078597521054585 0.5337372260932165 0.040737903325443005 489.4947722550583 493969.31462556164 0.00598600022013997 0.010365768166501421 5.7970063178792885e-08 7.236796226312234 0.08117161205020329 QAQAQES(ph)EEEEESR ddPTM_A549_MK2206_60min_R1 2 QAQAQESEEEEESR 14 0 H0YLQ7;Q9NVM6 H0YLQ7 DNAJC17 DnaJ homolog subfamily C member 17 1 QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR 131.24 8.9278e-09 283530000.0 1285.87 1287.46 1509.3400000000001 1393.35 1627.5900000000001 1103.3200000000002 1075.98 1353.1399999999999 2274.19 1933.6 1977.48 True False 1502.8934194968433 1352.986214813723 1723.3871077754873 1734.720812549858 1388.173667055435 1220.0725900754585 1271.4716382892868 1544.9517388174522 1759.0895961351755 1496.7984170564773 1486.4171403284533 1.0110845594560012 0.9102331896648836 1.1594235971973996 1.1670484452073373 0.9339058528003051 0.8208143979057314 0.8553935525853328 1.0393796579041497 1.1834427553401798 1.006984093795992 1.0 10.537623327746827 -8.519557001354597 24.741598208702822 1.08793024494314 0.9807110515610028 0.09138468188729265 0.11258058377525684 189.78979587497122 1413633.5162920048 0.021505804296874743 0.024631968470226178 3.023033769870536e-09 8.519557001354597 -0.10721919338213726 QAQAQES(ph)EEEEESR ddPTM_A549_PD325901_60min_R1 2 QAQAQESEEEEESR 14 0 H0YLQ7;Q9NVM6 H0YLQ7 DNAJC17 DnaJ homolog subfamily C member 17 1 QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR 167.71 1.9224e-22 340410000.0 1891.4 1690.0900000000001 1747.92 1211.57 1873.24 1432.7 1636.71 1925.91 1807.99 1573.59 1604.25 True False 2083.4135356249108 1832.5198156713718 1866.5443622968253 1286.4059272248883 1741.6700847271752 1421.0325662101714 1698.9958946920776 1887.4962142028337 1732.006467754586 1474.23325884945 1406.9374201786336 1.4808146444497776 1.302488504029343 1.3266719155567255 0.9143305940796984 1.2379158161178496 1.0100183176802193 1.2075845523224213 1.3415637306477963 1.2310472682819678 1.047831437067238 1.0 10.458342444362476 -14.99999999165838 0.03590322812448768 1.0676544654697831e-16 1.8620032563163793 0.27269709186256164 0.14267103440245915 805.6543813342607 2.2296380285588753 96.86506775729877 33.97055957745183 1.0000000192072917e-15 14.99999999165838 1.8620032563163793 QAQQERDELADEIANS(ph)SGK ddPTM_A549_MK2206_60min_R1 1 QAQQERDELADEIANSSGK 19 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 QAQQERDELADEIANS(0.5)S(0.5)GK 157.88 4.5061e-27 7663900.0 2102.3 2011.8 1960.3 1918.4 2979.4 2466.8 1983.0 2385.9 2787.1 3202.8 2701.9 True False 2457.116843699763 2114.1920269074367 2238.300016810185 2388.408086120249 2541.134206787315 2727.8351386706827 2343.28543163224 2724.108631512307 2155.8263000841407 2479.285255558794 2030.9436613535647 1.209839982494722 1.0409899925527177 1.102098526612217 1.1760090304663817 1.251208615552498 1.343136784430869 1.1537914498674515 1.3413019195701215 1.061489957159789 1.2207553083508098 1.0 10.987934504299519 -8.94647695921341 10.948495788158445 1.0270692438255615 1.1977525162882265 0.0990473616242693 0.10406506469046997 0.3788072822453233 75.98906267191484 0.0157849885112315 0.016752031682112468 1.1311573994558246e-09 8.94647695921341 0.17068327246266501 QAQQERDELADEIANS(ph)SGKGALALEEK ddPTM_A549_MK2206_60min_R1 1 QAQQERDELADEIANSSGKGALALEEK 27 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 QAQQERDELADEIANS(0.5)S(0.5)GKGALALEEK 148.94 1.5295999999999998e-33 20079000.0 3043.9 3283.7 2582.0 2019.9 4235.3 2896.5 2406.0 2492.6 4418.1 4206.5 4981.2 True False 3557.635903789996 3450.8263041832947 2948.1664252430246 2514.775590676755 3612.2929804679825 3203.0057074589095 2843.1390562315505 2845.9336832673525 3417.407404255943 3256.248728458871 3744.2305658737832 0.9501647511281822 0.9216383028425982 0.7873891239801407 0.6716401531458273 0.9647624303352669 0.8554509801432142 0.7593386695106082 0.7600850517076004 0.9127128642673291 0.8696709967963651 1.0 11.870453561998147 -9.266244946277475 1.635768663525528 0.9735376132900382 0.8336634690786506 0.12552224201213136 0.09190996294234118 0.28886480137756426 1.5968182681114529 0.019373154891439735 0.017209270288480377 5.416952828616038e-10 9.266244946277475 -0.13987414421138755 QAQQERDELADEIANS(ph)SGKGALALEEK ddPTM_A549_PD325901_60min_R1 2 QAQQERDELADEIANSSGKGALALEEK 27 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 QAQQERDELADEIANS(0.5)S(0.5)GKGALALEEK;QAQQERDELADEIANS(0.5)S(0.5)GKGALALEEK 153.25 1.4593e-41 14985000.0 3385.5 4032.2000000000003 4178.0 3737.3 3730.0 4252.8 4314.7 4549.1 4098.0 4307.6 3978.1 True False 3729.193467726625 4372.007645007128 4461.544204354967 3968.1445329758703 3468.017667801436 4218.166606811346 4478.898269594434 4458.364631800086 3925.7753111788747 4035.6174008603844 3488.8189192536192 1.068898545334772 1.2531483422310878 1.2788122019555686 1.1373890777411846 0.994037738290919 1.2090528928092834 1.2837863968453334 1.277900841226201 1.1252447897234907 1.156728822636557 1.0 11.768523003697846 -9.740874677377516 1.0120010405285529 1.0205177133211791 1.1861650248891145 0.0904584117980366 0.09858381466734775 0.3779519927511854 0.7986452119104317 0.029694812365713676 0.018720499358321707 1.8160396344667134e-10 9.740874677377516 0.16564731156793533 QAQQERDELADEIANSS(ph)GK ddPTM_A549_MK2206_60min_R1 1 QAQQERDELADEIANSSGK 19 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 QAQQERDELADEIANS(0.017)S(0.983)GK 148.17 2.0326e-21 6604400.0 1864.3 1777.2 1717.6 1538.8 2620.0 2060.1 1822.4 2125.3 2910.3 2236.9 2743.9 True False 2178.9482622410997 1867.6518889650547 1961.1815073576377 1915.8060690793557 2234.6014706930123 2278.0984146162955 2153.506490472311 2426.567783458276 2251.1216967941127 1731.5827364054796 2062.513902212533 1.0564526425269973 0.9055220849476734 0.9508694730512155 0.9288694088433543 1.083435834442558 1.104525119647677 1.0441173211788617 1.1765097829668976 1.0914455870475603 0.8395496071798344 1.0 11.010188128425623 -6.763084188702556 24.99934281131461 1.0614795598512636 0.9558237347001857 0.18179514735216373 0.08697257945885592 34.503053357732604 524424.5983340594 0.008960646983512238 0.01759372865627577 1.725503367889686e-07 6.763084188702556 -0.10565582515107796 QAQQERDELADEIANSS(ph)GKGALALEEK ddPTM_A549_MK2206_60min_R1 1 QAQQERDELADEIANSSGKGALALEEK 27 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 QAQQERDELADEIANS(0.099)S(0.901)GKGALALEEK 227.58 2.7131999999999994e-96 16420000.0 2718.2 3398.7 3037.3 3449.9 4007.6 2908.9 3149.6 3234.5 4770.6 4715.4 4103.1 True False 3176.965706390474 3571.6793129785788 3468.0348115378156 4295.125654871896 3418.0873488356187 3216.7178672284567 3721.8415509172464 3693.0002802408103 3690.066717082774 3650.187865012472 3084.187030200899 1.0300820525088363 1.158061841906496 1.1244567134153058 1.392628142461295 1.108262020222869 1.0429710765688958 1.2067496278508154 1.1973982913741306 1.1964471288378413 1.1835170271028292 1.0 11.59067453998046 -10.766933398663692 0.9546914547249418 0.9973431822795275 1.1660517379034538 0.0 0.10654968219548705 0.5773826791590102 0.9110339454594268 0.06796765335887683 0.016208648886477266 1.710277575015397e-11 10.766933398663692 0.1687085556239264 QAQQERDELADEIANSS(ph)GKGALALEEK ddPTM_A549_PD325901_60min_R1 2 QAQQERDELADEIANSSGKGALALEEK 27 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 QAQQERDELADEIANS(0.184)S(0.816)GKGALALEEK;QAQQERDELADEIANS(0.19)S(0.81)GKGALALEEK 170.6 5.5600000000000004e-49 39831000.0 8139.900000000001 8949.9 9495.0 9208.599999999999 10212.599999999999 10463.9 11287.2 10200.7 10481.6 10303.099999999999 9428.2 True False 8966.256655722338 9704.139482676781 10139.387798073341 9777.394307752005 9495.302207557348 10378.685467694984 11716.74057259284 9997.239036205654 10041.094802745856 9652.560507661958 8268.591170284051 1.0843753755713041 1.1736146198099444 1.226253371252968 1.1824740280896149 1.1483579260372545 1.2551939325521695 1.4170177641265984 1.2090619587208613 1.2143658570074054 1.1673766798812915 1.0 13.01342582387873 -10.498080196938904 0.8444039770525674 1.0016315181710698 1.2152654797275613 0.14947210733281868 0.09132822212899433 0.4112834192358627 0.5327107819289255 0.05297279221635222 0.01563542326097907 3.1762874823684334e-11 10.498080196938904 0.2136339615564915 QAQTQTS(ph)PEHLVLQQK ddPTM_A549_MK2206_60min_R1 2 QAQTQTSPEHLVLQQK 16 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 QAQT(0.029)QT(0.109)S(0.863)PEHLVLQQK;QAQT(0.003)QT(0.034)S(0.962)PEHLVLQQK 105.2 2.7850999999999997e-07 19608200.0 9394.4 10362.6 10246.5 9411.5 14282.6 9813.5 9614.0 11879.7 15645.8 14969.3 15844.5 True False 10979.945048971618 10890.012077756744 11699.60777546578 11717.317922498285 12181.648460045815 10851.958056325911 11360.739354368303 13563.683855055431 12102.051281208578 11587.724733369629 11909.87336404625 0.9219195463587448 0.9143684189482415 0.9823452708393001 0.9838322847219135 1.0228193103060192 0.9111732530327322 0.9538925400050278 1.1388604597595249 1.0161360168398161 0.9729511287962868 1.0 13.53987045286619 QAQTQTS(ph)PEHLVLQQK ddPTM_A549_PD325901_60min_R1 1 QAQTQTSPEHLVLQQK 16 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 QAQT(0.001)QT(0.03)S(0.97)PEHLVLQQK 145.52 6.7914e-15 20628000.0 6569.8 6331.9 6625.6 6394.3 7242.0 6960.5 6417.1 7744.7 7698.1 7040.6 7992.8 True False 7236.761259568859 6865.511434804979 7075.25305896943 6789.261388491049 6733.3469035437 6903.815995746417 6661.30625207186 7590.225882900389 7374.575627863867 6596.055314443687 7009.736270533756 1.0323870942177138 0.9794250696227984 1.009346541140368 0.9685473356580476 0.9605706468370442 0.9848895492355985 0.9502934197501035 1.0828119047512226 1.0520475155197715 0.9409848045454969 1.0 12.775144450959258 -8.245095558163959 24.997231468449844 1.0296322768956718 0.9830445444978384 0.13786804713967538 0.03930976395757591 752.3504332747333 1150692.181450541 0.005162812253651733 0.006657278768622964 5.687277794452846e-09 8.245095558163959 -0.046587732397833426 QAREES(ph)EES(ph)EAEPVQR ddPTM_A549_MK2206_60min_R1 1 QAREESEESEAEPVQR 16 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 QAREES(1)EES(1)EAEPVQR 68.49 0.00056767 7408600.0 333.6 244.9 246.22 131.8 368.36 458.98 242.33 334.8 409.26 396.5 512.59 True False 389.90352426306447 257.3643639475252 281.13769838239244 164.09100591672686 314.1747319635412 507.548958953734 286.3582242296725 382.25892528199836 316.5632634539254 306.93037461879067 385.2997562356946 1.0119485360498222 0.6679588029380712 0.7296596840056541 0.4258788209986552 0.8154034018421622 1.3172833637695256 0.7432089421164911 0.9921078824876388 0.8216025531567638 0.7966015281645701 1.0 8.589837463034929 -7.000299145550385 24.999998197515694 0.9362930036515555 0.696577383810203 0.2524375425857809 0.18995854487805977 11.153339453918402 932274.0963220801 0.025811833651554098 0.048407673829061706 9.993114290888778e-08 7.000299145550385 -0.2397156198413526 QAREES(ph)EES(ph)EAEPVQR ddPTM_A549_PD325901_60min_R1 2 QAREESEESEAEPVQR 16 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 QAREES(1)EES(1)EAEPVQR;QAREES(1)EES(1)EAEPVQR 79.568 9.458200000000001e-05 23907300.0 841.96 1253.21 828.8 1026.37 1042.09 1156.37 1283.94 1432.45 1039.76 1167.28 1037.19 True False 927.4351593818075 1358.8224048408767 885.0473519792718 1089.766543844605 968.8971934153346 1146.9529061132519 1332.8010392989272 1403.8786610147147 996.0625030627986 1093.5777415907494 909.622205289123 1.019582804805235 1.4938316115633694 0.9729834505281891 1.1980430309506607 1.065164403179198 1.2609112876138433 1.4652248280101043 1.5433645450294307 1.095028790272551 1.2022328998038874 1.0 9.829123662858754 -8.979289201437096 23.084533283635633 1.0419239170610992 1.2547459414990867 0.10281764178250707 0.18735158875481356 66.43267769724966 74048.66483851876 0.032031916723637296 0.03277581494173315 1.0488437595417648e-09 8.979289201437096 0.21282202443798748 QAREES(ph)EESEAEPVQR ddPTM_A549_PD325901_60min_R1 1 QAREESEESEAEPVQR 16 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 QAREES(0.999)EES(0.001)EAEPVQR 74.69800000000001 0.00014914 3171300.0 550.66 356.45 666.53 492.69 731.66 548.12 443.86 399.23 355.92 563.83 683.35 True False 606.5625978255337 386.4892924613838 711.7647339704927 523.1223423198248 680.2707256899728 543.6562924486068 460.7513351895114 391.26704446012377 340.96192014514037 528.2296775761702 599.3022821125569 1.012114613826238 0.6448987497577992 1.1876556375882676 0.8728856170475512 1.1351045140225395 0.9071487105508819 0.7688129161887226 0.6528709403222974 0.5689314563315866 0.8814077525520947 1.0 9.22714005740274 -7.658869229145816 4.519712145849775 0.7764289848874649 0.9641488400670973 0.23628750274858568 0.1683365219474192 0.3093194658570271 11.041287165110862 0.030924586441962096 0.04617080332679873 2.1934653124983972e-08 7.658869229145816 0.1877198551796324 QAS(ph)ALIDRPAPFFER ddPTM_A549_PD325901_60min_R1 1 QASALIDRPAPFFER 15 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 QAS(1)ALIDRPAPFFER 79.51100000000001 0.00012429 5234900.0 730.37 572.82 693.7 580.94 754.87 638.9 684.39 1021.6 565.54 760.39 562.01 True False 804.5166247300243 621.0935517119647 740.7786535569751 616.8233443895332 701.850535360126 633.6970102266196 710.4348359625776 1001.2233865703041 541.7723205183265 712.378845631031 492.88633287492223 1.6322558997272567 1.2601151833308737 1.5029401388270174 1.251451507676643 1.4239602288551014 1.285685903543668 1.441376618862065 2.031347432034356 1.0991830862062266 1.445320752709547 1.0 8.945111167199082 -8.967364074543193 24.999475638119776 1.0437568036254887 1.46198317351301 0.17676386759682838 0.24046159510176157 112.45292071555033 86140.76997851215 0.035109622644098115 0.03712569250773828 1.0780426065994237e-09 8.967364074543193 0.41822636988752127 QAS(ph)ALIDRPAPHFER ddPTM_A549_MK2206_60min_R1 1 QASALIDRPAPHFER 15 1 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0;A0A1B0GWG0;A0A2R8Y6D0 P11171;A0A1B0GWG0 EPB41 Protein 4.1 1 QAS(1)ALIDRPAPHFER 72.64399999999999 0.00044238 3064900.0 343.95 274.36 332.56 289.01 559.98 243.67 425.58 440.81 480.13 469.32 530.29 True False 402.0003512298593 288.3237521136915 379.72200866724273 359.81746297415174 477.6076838010202 269.45499766494464 502.9023772032519 503.2961674240075 371.3813216100599 363.30028604310405 398.6043577405463 1.0085197098911887 0.7233331661199826 0.9526288443499803 0.9026932495513731 1.1981998553861712 0.6759961160292541 1.2616580010662948 1.2626459235842216 0.931704118126561 0.9114307934374821 1.0 8.638813672295674 -6.55437078886946 24.999618950557768 1.0049512449570404 0.8860080541715135 0.11049742247604777 0.17526802702097993 358.8518496358056 284869.5344274239 0.02386659576381791 0.04968260936710893 2.7901606604104906e-07 6.55437078886946 -0.11894319078552684 QAS(ph)DTEEDDITDNQK ddPTM_A549_MK2206_60min_R1 2 QASDTEEDDITDNQK 15 0 Q6ZU65-2;Q6ZU65;H7C4P8;C9J6Y5 Q6ZU65-2 UBN2 Ubinuclein-2 1 QAS(0.996)DT(0.004)EEDDITDNQK;QAS(0.965)DT(0.035)EEDDITDNQK 170.91 3.2145000000000004e-27 6313300.0 2019.25 2328.26 1662.17 1464.37 3024.3999999999996 1815.25 1470.4499999999998 1939.4 2983.3 2641.5 2947.2 True False 2360.0500340773165 2446.7584891974893 1897.8906998629743 1823.1407157380663 2579.514766398452 2007.338550134571 1737.6117311869023 2214.315889163403 2307.587313351158 2044.7833153985748 2215.3289014179736 1.0653271541605902 1.1044673716987954 0.8567083193146555 0.8229661584657348 1.1643935872219122 0.9061131053044659 0.7843583542266355 0.9995427260241483 1.0416454693811525 0.9230156813689213 1.0 11.113305190764718 -8.509145365923976 24.755244590943164 1.019714775320863 0.9554125687146603 0.0 0.11566665300297511 1314.1941295305028 2368918.3424765277 0.01866663928771414 0.02207732164886676 3.096382712543857e-09 8.509145365923976 -0.06430220660620278 QAS(ph)DTEEDDITDNQK ddPTM_A549_PD325901_60min_R1 2 QASDTEEDDITDNQK 15 0 Q6ZU65-2;Q6ZU65;H7C4P8;C9J6Y5 Q6ZU65-2 UBN2 Ubinuclein-2 1 QAS(0.994)DT(0.006)EEDDITDNQK;QAS(0.964)DT(0.036)EEDDITDNQK 176.83 1.3058e-27 8273400.0 2342.59 2181.0 2575.2 2106.71 3315.4 2279.45 2595.2 2617.0 2330.3999999999996 3016.5 3010.2 True False 2580.40801227639 2364.8005242201652 2749.9685579355964 2236.836692014446 3082.537741509081 2260.8869149492384 2693.961756147932 2564.801882003217 2232.461392184298 2826.037675200889 2639.9644832299964 0.977440427198195 0.8957698254056933 1.0416687706991459 0.8472980247361799 1.1676436410756543 0.8564080802265353 1.0204537876403057 0.9715289346867205 0.8456406918978249 1.0704832179193684 1.0 11.366302805074366 -8.594771454587693 24.999360547632506 0.9261331540293317 0.9721772380857153 0.0 0.10135545760163117 113.18520296539802 39355.807646000096 0.015559835331045508 0.017643196098682506 2.542310232292677e-09 8.594771454587693 0.046044084056383605 QAS(ph)EQNWANYSAEQNR ddPTM_A549_MK2206_60min_R1 2 QASEQNWANYSAEQNR 16 0 P17302 P17302 GJA1 Gap junction alpha-1 protein 1 QAS(1)EQNWANYSAEQNR;QAS(1)EQNWANYSAEQNR 88.551 1.2292999999999999e-05 7121200.0 2278.8 2166.06 2030.7399999999998 2281.33 3491.8 2534.2 2139.35 2116.96 3844.7 3434.7 4077.7 True False 2663.4057286890643 2276.3032020097044 2318.7294680085292 2840.2559524127955 2978.16084555949 2802.3673619341857 2528.0422028050584 2417.0455629180983 2973.881588724297 2658.7988844972497 3065.094551205235 0.8689473307248479 0.7426535018681993 0.7564952497458112 0.9266454606746046 0.9716375125812803 0.9142841485370357 0.8247844105856373 0.7885712895765923 0.9702413870250522 0.8674443284145266 1.0 11.581715863129835 -6.954249924838629 0.14192906434751285 1.0771739980238342 0.6540435279825231 0.025711345149126874 0.08411647966134346 8.713824086515784 0.39807070189454 0.3259504664365772 0.8620753237345534 1.1110921395087494e-07 6.954249924838629 -0.4231304700413111 QAS(ph)ESSSRPH ddPTM_A549_MK2206_60min_R1 6 QASESSSRPH 10 1 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QAS(0.834)ES(0.165)S(0.001)SRPH;QAS(0.996)ES(0.004)SSRPH;QAS(0.986)ES(0.009)S(0.002)S(0.002)RPH;QAS(0.987)ES(0.012)SSRPH;QAS(0.994)ES(0.006)SSRPH;QAS(0.915)ES(0.073)S(0.01)S(0.002)RPH 94.68799999999999 0.00015977 427587900.0 2195.81 2944.205999999999 2412.4500000000003 1982.7300000000002 2780.0800000000004 2281.86 2478.2999999999997 2297.5499999999997 3927.99 5574.589999999999 5353.910000000001 True False 2566.4090455997607 3094.0535096794097 2754.5716857387824 2468.498939008131 2371.133914749707 2523.324910623922 2928.575030365193 2623.2347484517773 3038.3065367110958 4315.286247279102 4024.3863866010824 0.6377143740830759 0.7688261544619195 0.6844699840228908 0.6133851727624435 0.589191416272611 0.627008609070232 0.7277072201903083 0.6518347137803807 0.7549738630532417 1.0722842770879433 1.0 11.974553111493453 -9.992915784858164 0.5564974293343539 1.0087854322805172 0.6552667879993771 0.8557552823720811 0.05749236401485528 0.24309450860489543 0.1471043334006785 0.03954463299662808 0.013784045615604387 1.0164457753338e-10 9.992915784858164 -0.3535186442811401 QAS(ph)ESSSRPH ddPTM_A549_PD325901_60min_R1 4 QASESSSRPH 10 1 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QAS(0.871)ES(0.059)S(0.059)S(0.012)RPH;QAS(0.796)ES(0.203)S(0.001)SRPH;QAS(0.983)ES(0.011)S(0.003)S(0.003)RPH;QAS(0.487)ES(0.171)S(0.171)S(0.171)RPH 84.89200000000001 0.00024339 353453600.0 1681.15 1564.8 1583.44 1494.97 2406.0299999999997 1150.19 1612.52 2312.54 1541.86 1892.8999999999999 2265.69 True False 1851.8191104027806 1696.6711876660777 1690.9017603982377 1587.3109015767886 2237.0387531528913 1140.8232339842787 1673.8853310048007 2266.414575547464 1477.060986162582 1773.3819709556653 1987.0244933922575 0.9319558548779368 0.8538753263023511 0.8509717751448158 0.7988381154109098 1.125823441327494 0.574136472790358 0.8424080007927511 1.140607266334312 0.7433531851642837 0.8924811832229301 1.0 10.956393940982812 -11.16989256740484 1.569508351036445 1.000024204208807 0.8561189284476907 0.005595969914665266 0.15531602114001306 0.7275974226216709 3.216644533423088 0.1073186242907599 0.022675614322095635 6.762502405452611e-12 11.16989256740484 -0.14390527576111634 QAS(ph)FLEAEGGAK ddPTM_A549_MK2206_60min_R1 1 QASFLEAEGGAK 12 0 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 QAS(1)FLEAEGGAK 127.57 9.306800000000001e-08 6977400.0 6716.0 9755.8 7728.4 6141.3 10891.0 7878.3 6246.8 8289.9 11761.0 11888.0 11091.0 True False 7849.4966095645705 10252.328549609098 8824.403331079851 7645.918775693438 9288.948327220462 8711.976476807711 7381.762700111082 9465.018711753999 9097.152278457743 9202.49254342542 8336.798603972164 0.9415480668832024 1.2297680484597837 1.0584882459407574 0.9171288811091649 1.11421047436538 1.045002631184684 0.8854433279213386 1.1353301382672578 1.0912045151388567 1.1038400926514869 1.0 13.025277768469145 -11.11780845966889 1.5011228014809028 1.0002760093238516 1.0540564822897958 0.0 0.10120001275498051 1.2363642050945511 5.027113652091727 0.0649500832266946 0.014378402615538941 7.624151898886863e-12 11.11780845966889 0.053780472965944126 QAS(ph)LDGLQQLR ddPTM_A549_MK2206_60min_R1 2 QASLDGLQQLR 11 0 Q3MII6 Q3MII6 TBC1D25 TBC1 domain family member 25 1 QAS(1)LDGLQQLR;QAS(1)LDGLQQLR 138.02 2.3502e-08 31770000.0 3071.1 3557.7 2891.5 3434.4 4642.1 3705.0 3776.5 3761.3 4826.8 5320.5 5136.6 True False 3589.426598813841 3738.7717338346683 3301.5581791596474 4275.828154176074 3959.253239352684 4097.060640820043 4462.641166192211 4294.475793498148 3733.537506815732 4118.595354752268 3861.0404570519718 0.9296526774947298 0.9683327008413013 0.8550954634856359 1.1074289953026824 1.0254368695156593 1.0611286481955904 1.155813106812038 1.1122586881094527 0.9669770488927762 1.066706086238979 1.0 11.91477395597953 -6.254486857207595 24.997687842056713 1.020471841469745 0.92275752806181 0.3961893720796228 0.06612828812137453 601.6512531924703 2163221.1246342463 0.01053452185300367 0.027216699549906995 5.565614768882617e-07 6.254486857207595 -0.0977143134079349 QAS(ph)LDGLQQLR ddPTM_A549_PD325901_60min_R1 2 QASLDGLQQLR 11 0 Q3MII6 Q3MII6 TBC1D25 TBC1 domain family member 25 1 QAS(1)LDGLQQLR;QAS(1)LDGLQQLR 181.08 1.6887e-18 64639000.0 16333.9 18444.4 17857.2 15434.6 21511.0 16072.599999999999 17898.8 18718.4 16898.6 19688.1 18995.6 True False 17992.10550361834 19998.77431862744 19069.09697606691 16387.960187480097 20000.141568921346 15941.71007445355 18579.948628599184 18345.046827699283 16188.410608464452 18444.990006007825 16659.261623029608 1.0800061797904787 1.2004598265616597 1.1446543915071223 0.9837146782559398 1.2005418980438687 0.9569277699808663 1.1152924450693802 1.1011920721827948 0.9717363815264023 1.107191328366537 1.0 14.024036838092023 -7.720850821451324 0.4800593169940093 0.9833941186922329 1.13986233928421 0.03747828150599586 0.08270097748012918 0.77743819465822 0.3703526334357117 0.02098354614245902 0.04661422603936676 1.9017314054496593e-08 7.720850821451324 0.15646822059197707 QAS(ph)LSQSIR ddPTM_A549_MK2206_60min_R1 2 QASLSQSIR 9 0 Q6PJF5-2;Q6PJF5;K7EPV3;K7EKI1 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 QAS(0.986)LS(0.01)QS(0.004)IR;QAS(0.853)LS(0.147)QSIR 110.93 0.0003412 13624500.0 3109.1000000000004 3827.2 3160.3 2769.6000000000004 4222.1 3022.1 2938.2 2943.0 3734.9 3794.1000000000004 4687.7 True False 3633.8400698030405 4021.9881327071007 3608.4780610749544 3448.152124332069 3601.0346829820523 3341.8966160923783 3472.0329073231705 3360.179262559502 2888.951113409728 2937.0101748831107 3523.6147160616983 1.031281897319506 1.1414381130756623 1.0240841726044632 0.9785837562246382 1.0219717458232451 0.9484284989669858 0.9853611098559095 0.9536171044021334 0.8198828039402315 0.8335219402664351 1.0 11.782840468393989 -6.782689235038879 0.7284778520032164 0.9190028618104089 1.086084118169502 0.5250907532350879 0.05930178918507387 0.6077748048604878 0.5635543383551399 0.013073087598944239 0.054898363732796544 1.6493421772217085e-07 6.782689235038879 0.1670812563590931 QAS(ph)PAWK ddPTM_A549_MK2206_60min_R1 3 QASPAWK 7 0 A0A2R8Y7W8;A0A2R8Y6W5;Q16626 A0A2R8Y7W8 MEA1 Male-enhanced antigen 1 1 QAS(1)PAWK;QAS(1)PAWK;QAS(1)PAWK 85.807 0.011141 28709000.0 12400.0 9919.9 8096.599999999999 7462.0 13949.599999999999 13001.7 11045.9 11529.9 14338.800000000001 12783.2 13543.2 True False 14492.816849106717 10424.780538681327 9244.819627661762 9290.19033498191 11897.63231892338 14377.53126417004 13052.797049554489 13164.298633837847 11091.084694358457 9895.466241682023 10180.049666695144 1.4236489333172058 1.0240402434171652 0.9081310927103762 0.9125879184436122 1.1687204589823807 1.412324274920514 1.2821938474679324 1.2931467983801606 1.0894921987113517 0.9720449865834978 1.0 13.313456979638891 -9.236627303420532 2.21670982277883 1.030358615303262 1.1656699380538673 0.14441284551482125 0.16921617733954075 0.5018467477024189 5.087787882666944 0.03699181716232437 0.034050515811241445 5.799261556155576e-10 9.236627303420532 0.1353113227506053 QAS(ph)PAWK ddPTM_A549_PD325901_60min_R1 2 QASPAWK 7 0 A0A2R8Y7W8;A0A2R8Y6W5;Q16626 A0A2R8Y7W8 MEA1 Male-enhanced antigen 1 1 QAS(1)PAWK;QAS(1)PAWK 74.6 0.018512 55351000.0 11866.0 9814.5 9572.599999999999 9051.2 8766.8 9200.6 8612.099999999999 8181.3 13008.8 12777.3 14404.3 True False 13070.627584712494 10641.602358990742 10222.254200720052 9610.272067233343 8151.050211818132 9125.673364049206 8939.83817822194 8018.117553394314 12462.085375320592 11970.539097412342 12632.66241638092 1.0346692687492116 0.8423879312401836 0.8091923827129851 0.7607479524483765 0.6452361302118366 0.7223871788274687 0.7076764884201725 0.6347131973539583 0.986497142452003 0.947586399672171 1.0 13.624871108153723 -8.78926906928329 21.78391306455213 0.9936240030042957 0.7652887756607784 0.4403931854521307 0.10413781705562476 30.98324831459558 24252.053543442762 0.018435881224770606 0.019630986302974815 1.6245419509376891e-09 8.78926906928329 -0.2283352273435173 QAS(ph)PLISPLLNDQACPR ddPTM_A549_MK2206_60min_R1 2 QASPLISPLLNDQACPR 17 0 C9JME2;Q9Y4F1;Q9Y4F1-2 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 QAS(0.988)PLIS(0.012)PLLNDQACPR;QAS(0.998)PLIS(0.002)PLLNDQACPR 178.51 1.8886e-30 10467100.0 3110.0 3319.9 2637.5 2437.2 3590.1 3281.2 3044.0 3040.5 4304.9 3916.4 3979.9 True False 3634.891967800152 3488.868729560592 3011.537159790268 3034.314109410066 3062.001045776713 3628.4144061157153 3597.0553978257876 3471.500186140731 3329.8470235126883 3031.68251994207 2991.5809903479226 1.2150404684104548 1.1662290744650154 1.0066707769258905 1.014284460022984 1.0235394113199658 1.212875204723683 1.2023927847620959 1.16042326694187 1.1130726643390743 1.013404794897257 1.0 11.546692405917247 -10.373275842606077 0.8938912940466334 1.0047290279660597 1.1202785184488067 0.2619422795747469 0.07507339874395254 0.6450623372451413 0.9817952415883788 0.04359108443452276 0.015479195745529112 4.233739741994593e-11 10.373275842606077 0.11554949048274699 QAS(ph)PLISPLLNDQACPR ddPTM_A549_PD325901_60min_R1 2 QASPLISPLLNDQACPR 17 0 C9JME2;Q9Y4F1;Q9Y4F1-2 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 QAS(0.999)PLIS(0.001)PLLNDQACPR;QAS(0.997)PLIS(0.003)PLLNDQACPR 154.74 4.6699e-22 10201400.0 3067.1 3618.8999999999996 4138.4 2796.4 3794.3 3657.8 3324.8 4341.2 3609.7 3635.6 4199.0 True False 3378.469734120318 3923.8774035306556 4419.256710220825 2969.1272769148122 3527.8014576243913 3628.0120895397263 3451.3270834003715 4254.611360394483 3457.9968620698833 3406.047595544622 3682.549619654094 0.9174268056264946 1.0655327989577041 1.2000535407954478 0.8062694555609833 0.9579779831875725 0.9851902796303691 0.9372112910523548 1.155343932825031 0.939022476062304 0.9249156012362315 1.0 11.846489249311292 -6.250226853462205 24.978538823121166 0.9725733348844223 1.061457194383651 0.1587559894729217 0.0985366697960007 1074.8506845474753 2394479.265379838 0.012872153446536999 0.03374753668083793 5.620476632400826e-07 6.250226853462205 0.08888385949922872 QAS(ph)PTEVVER ddPTM_A549_MK2206_60min_R1 2 QASPTEVVER 10 0 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 1 QAS(0.977)PT(0.023)EVVER;QAS(0.967)PT(0.033)EVVER 142.39 4.8486e-08 487350000.0 4592.1 5165.9 4909.7 4148.8 7340.5 5640.7 5532.4 5478.5 8939.3 6529.1 7105.6 True False 5367.134213934109 5428.822244657086 5605.969286605606 5165.256186246708 6260.722173901551 6237.5951300063725 6537.565467454459 6255.094152202596 6914.562823128753 5054.171775343113 5341.0834154165195 1.0048774371211646 1.0164271595136143 1.0495940337543725 0.9670802315758067 1.172182062506379 1.167852033915471 1.2240148597163658 1.1711283396450751 1.2945992948117113 0.9462821270970485 1.0 12.382916700640497 -6.768589106240787 24.927541121895928 1.155217592168047 1.0128541239444688 0.2999668835209095 0.09348257451195682 158.27952882998767 551843.9961083084 0.015557602279186232 0.029844740114821525 1.7037697130088968e-07 6.768589106240787 -0.14236346822357815 QAS(ph)PTEVVER ddPTM_A549_PD325901_60min_R1 2 QASPTEVVER 10 0 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 1 QAS(0.989)PT(0.011)EVVER;QAS(0.928)PT(0.072)EVVER 167.59 2.4168000000000004e-10 555960000.0 13514.2 13754.4 12456.400000000001 11926.300000000001 15172.6 9943.0 12217.599999999999 11441.9 11706.300000000001 13024.4 13744.5 True False 14886.151635371785 14913.531559071007 13301.7662104182 12662.960464407492 14106.928918628435 9862.027504591144 12682.547453727255 11213.682328503091 11214.324920754823 12202.037161241988 12054.013633564107 1.2349539404801781 1.237225376744609 1.1035134532600623 1.0505181800315695 1.170309686671337 0.8181530073211937 1.0521431150876592 0.9302861826270767 0.9303394920285147 1.0122800199317605 1.0 13.557225981200276 -6.195733818096165 0.7656836227184827 0.9627914604241032 1.2770475832271422 0.6118468646191605 0.07811392979766865 0.47232919258908085 0.38706570318592254 0.012014031944211388 0.09663480678466105 6.371859366434785e-07 6.195733818096165 0.31425612280303894 QAS(ph)RDLEQPTYR ddPTM_A549_MK2206_60min_R1 2 QASRDLEQPTYR 12 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 QAS(1)RDLEQPTYR;QAS(1)RDLEQPTYR 99.796 6.9013e-05 16795300.0 2730.0 3440.6 2768.2 2142.85 3314.6 2654.2 2202.63 3029.8 3765.3 4383.2 4286.6 True False 3190.7572579081707 3615.711844009208 3160.7723851114392 2667.848346196192 2827.026730824071 2935.065682284631 2602.8193596954725 3459.283428373352 2912.465561948554 3393.0320757353893 3222.1189158585403 0.9902667596170909 1.1221534457382973 0.9809608110845421 0.8279794805417162 0.8773812527247473 0.9109116574931179 0.8077974238892874 1.0736051395705917 0.9038976021691991 1.0530437157473156 1.0 11.653794023943554 -5.990306537259588 21.57674082568504 0.935203754500119 1.055047230844048 0.24277768498989394 0.08452140544095585 39.28151097316932 87427.26544945869 0.0107953276739244 0.033455182291682886 1.0225709781462427e-06 5.990306537259588 0.11984347634392889 QAS(ph)SDSDSILSLK ddPTM_A549_PD325901_60min_R1 2 QASSDSDSILSLK 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 QAS(0.483)S(0.483)DS(0.033)DS(0.001)ILSLK;QAS(0.492)S(0.492)DS(0.015)DSILSLK 133.25 3.0943999999999996e-08 8508800.0 6002.0 7299.3 6155.3 5992.0 7021.2 6071.1 6723.700000000001 6318.5 6180.700000000001 6345.1 6135.9 True False 6611.318621561131 7914.437627895578 6573.03567282579 6362.112231180637 6528.055133825048 6021.658974466792 6979.574082849815 6192.472560732637 5920.946672963222 5944.46930313846 5381.223198674814 1.2285902995417923 1.4707506705621496 1.221476127294715 1.1822799382763713 1.2131173327716 1.1190130481764244 1.2970237109972715 1.1507555684100972 1.1002975446960315 1.104668786940923 1.0 12.39371843180846 -3.713418940616868 0.08258386485119076 0.7837180760368205 2.031036746510841 0.4704406901933923 0.08536120449335001 45.52793995846267 0.37747837079185437 1.1156860879085841 6.717136533633048 0.00019345549021049715 3.713418940616868 1.2473186704740205 QAS(ph)TDAGTAGALT(ph)PQHVR ddPTM_A549_PD325901_60min_R1 1 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 2 QAS(0.749)T(0.251)DAGTAGALT(1)PQHVR 105.79 7.3071e-11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QAS(ph)TDAGTAGALTPQHVR ddPTM_A549_MK2206_60min_R1 4 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QAS(0.78)T(0.22)DAGTAGALTPQHVR;QAS(0.924)T(0.074)DAGT(0.002)AGALTPQHVR;QAS(0.798)T(0.202)DAGTAGALTPQHVR;QAS(0.5)T(0.5)DAGTAGALTPQHVR 263.09 3.4125999999999995e-100 563126000.0 7391.400000000001 8933.3 7605.3 7717.700000000001 11840.599999999999 8999.2 7945.2 9801.0 13980.199999999999 14014.199999999999 14157.2 True False 8638.887617619946 9387.966812790635 8683.845900039027 9608.536846460713 10098.863425147969 9951.48937081451 9388.739995665392 11190.321764303659 10813.707021791923 10848.382486715393 10641.576521157212 0.8118052433720145 0.88219699347421 0.8160300198729113 0.902924188662963 0.9490006866059516 0.935151793630324 0.8822696502721213 1.0515661605266335 1.0161752819511738 1.0194337714103747 1.0 13.377424277641465 -7.037347900309983 0.5618510971966483 1.0114412534694845 0.8211060296759832 0.7382808577703738 0.04011194115965435 0.3850839662483874 0.21200235682198804 0.00864824247903445 0.03367546258444863 9.175972423028592e-08 7.037347900309983 -0.19033522379350132 QAS(ph)TDAGTAGALTPQHVR ddPTM_A549_PD325901_60min_R1 2 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QAS(0.497)T(0.497)DAGT(0.006)AGALTPQHVR;QAS(0.5)T(0.5)DAGTAGALTPQHVR 265.42 2.743299999999999e-100 61158000.0 12645.2 14003.900000000001 15686.7 13104.2 18781.2 13919.0 15264.5 16081.6 16749.8 17187.9 17545.4 True False 13928.931395095764 15184.05779969132 16751.293793790104 13913.616672202505 17462.0733036226 13805.648278829749 15845.398900554901 15760.839872228864 16045.864154998515 16102.65306069463 15387.42702945439 0.9052151063613952 0.9867834154876066 1.0886351409969335 0.9042198312667389 1.1348273671873117 0.8972031680412311 1.0297627322764142 1.0242673997452396 1.0427905928836416 1.0464811972704187 1.0 13.90946439469987 -5.331200679160691 3.806933910389894 1.0170922196970866 0.9008487013911034 0.19568507822921877 0.06627515877774369 0.24010888660469715 5.950294249881047 0.007722506398234217 0.0665012225032163 4.664437957666083e-06 5.331200679160691 -0.11624351830598323 QAS(ph)VHDS(ph)GEEGEA ddPTM_A549_PD325901_60min_R1 1 QASVHDSGEEGEA 13 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 2 QAS(1)VHDS(1)GEEGEA 97.2 0.00018898 31488000.0 719.8 1081.1 990.62 801.41 1005.9 876.63 1099.7 1059.7 915.59 1162.9 1128.5 True False 792.8735661112468 1172.20809112078 1057.849430281981 850.9112755658335 935.2490541666119 869.4910159257498 1141.5496852789297 1038.563452181432 877.1109363499922 1089.4742955382449 989.7016541509037 0.801123816238822 1.1844055086746867 1.0688568881796439 0.8597654373891668 0.9449807931956946 0.8785385093366481 1.1534280866270767 1.049370229730947 0.8862377188835695 1.1008108261402667 1.0 9.95084987966811 -8.75611677226146 24.999052933085945 0.946278923756016 0.997046094023983 0.0 0.12497667633066635 393.2476230028164 1846993.0512831502 0.019877152546331302 0.02221330229083218 1.7534089852330993e-09 8.75611677226146 0.050767170267967066 QAS(ph)VHDSGEEGEA ddPTM_A549_PD325901_60min_R1 2 QASVHDSGEEGEA 13 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 QAS(0.61)VHDS(0.39)GEEGEA;QAS(0.565)VHDS(0.435)GEEGEA 124.42 4.298399999999999e-06 18858000.0 692.57 1211.8400000000001 1048.28 796.26 1410.97 1063.71 882.46 1003.69 1027.82 1039.02 982.98 True False 762.8791965569135 1313.9660097528495 1119.4225846197287 845.4431717623326 1311.8683347822503 1055.047498431927 916.0424982006407 983.6706155704271 984.6242997403298 973.416099879737 862.0796916236205 0.8849288574703863 1.5241816070137981 1.29851404167918 0.9807018770736204 1.5217483343233715 1.2238398708185265 1.0625960767912161 1.1410437168723986 1.1421499767450867 1.1291486266732813 1.0 9.751677429618127 -9.239129390105353 0.40397827158358723 0.9982711241402533 1.252763955814607 0.0775670936342363 0.18972941280363334 1.329359877224407 0.5436446027591615 0.12643949575324967 0.07733702979055553 5.765946519586044e-10 9.239129390105353 0.25449283167435377 QASASYDS(ph)EEEEEGLPMSYDEKR ddPTM_A549_MK2206_60min_R1 4 QASASYDSEEEEEGLPMSYDEKR 23 1 Q15059 Q15059 BRD3 Bromodomain-containing protein 3 1 QASAS(0.004)YDS(0.996)EEEEEGLPMSYDEKR;QASASYDS(0.999)EEEEEGLPMSYDEKR;QASAS(0.001)YDS(0.999)EEEEEGLPMSYDEKR;QASASYDS(1)EEEEEGLPMSYDEKR 171.99 8.456399999999999e-41 113246000.0 8200.6 10304.3 8936.699999999999 9050.099999999999 14540.0 9269.6 8269.9 7516.799999999999 15737.900000000001 15908.5 15441.800000000001 True False 9584.6607945794 10828.744856776175 10204.058440150786 11267.37490627443 12401.185261021525 10250.502919337518 9772.433782680511 8582.329419234538 12173.290778262059 12314.758801066902 11607.174888000833 0.8257531127998898 0.9329354439184528 0.8791164550040037 0.9707250054380004 1.0684068587474733 0.8831178144764749 0.8419304332859648 0.7393986479954486 1.0487729267219417 1.0609609073606316 1.0 13.50272925174951 QASASYDS(ph)EEEEEGLPMSYDEKR ddPTM_A549_PD325901_60min_R1 4 QASASYDSEEEEEGLPMSYDEKR 23 1 Q15059 Q15059 BRD3 Bromodomain-containing protein 3 1 QASAS(0.001)YDS(0.999)EEEEEGLPMSYDEKR;QASAS(0.003)YDS(0.997)EEEEEGLPMSYDEKR;QASAS(0.002)YDS(0.998)EEEEEGLPMSYDEKR;QASASYDS(1)EEEEEGLPMSYDEKR 246.35 3.0568999999999997e-99 196110000.0 17153.2 16676.800000000003 16954.2 17647.6 17627.399999999998 19537.899999999998 19104.9 21270.4 20566.9 21823.0 23195.1 True False 18894.58023648157 18082.2124632347 18104.813965886788 18737.652171392427 16389.312235228695 19378.789820170103 19831.94742410242 20846.145185693993 19702.54471632133 20445.092055663525 20342.249745853464 0.9288343458831547 0.8888993444257833 0.8900104065223783 0.9211199550439049 0.8056784495318405 0.9526374939979414 0.974914164946035 1.02477088061232 0.9685528868476049 1.0050556015728311 1.0 14.312191622053659 -7.49472859158363 9.510872185853229 0.9866657067416335 0.8880575379981639 0.7063933335943322 0.033003381073110266 0.18644032010104786 60.940325097039256 0.004716839132421936 0.007448353970703111 3.200894855112181e-08 7.49472859158363 -0.09860816874346956 QASEGPLK ddPTM_A549_MK2206_60min_R1 4 QASEGPLK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;; 116.05 0.0035811 64030750.0 16470.059999999998 17930.15 17343.94 14789.65 20954.120000000003 17108.940000000002 16551.37 15480.220000000001 23275.510000000002 23660.019999999997 24199.84 False True 19249.80347369343 18842.718049137275 19803.571490871233 18413.114913932608 17871.79670575493 18919.396674804782 19558.539684596508 17674.588591185475 18003.64414835183 18315.205049402462 18190.351846393445 1.0582425032922076 1.0358633086513482 1.0886854557899954 1.012246220931858 0.9824876866963035 1.040078654583907 1.0752150288106896 0.9716463288031325 0.98973589408175 1.0068637046750568 1.0 14.150885828098923 -6.764642833373829 0.4099735277064532 0.9934215951470129 1.0693373840405431 0.28303260537458863 0.03129315984561457 1.719905031281404 0.4162765831191478 0.009299757836330467 0.05329400459608773 1.7193217873811403e-07 6.764642833373829 0.07591578889353023 QASEGPLK ddPTM_A549_PD325901_60min_R1 3 QASEGPLK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;; 128.38 0.0029504 224904700.0 32648.8 34535.3 35063.7 31082.7 41843.6 31650.6 35537.1 38134.4 36550.4 36465.3 35702.3 False True 35963.28214122376 37445.71093264591 37443.33353715684 33002.60778506652 38904.64988858341 31392.848007322995 36889.48378714727 37373.77947614194 35014.31379543984 34162.87473479296 31311.14343552665 1.1485777328853037 1.1959228192911913 1.1958468911956888 1.0540211619234792 1.2425176988088182 1.002609440692084 1.1781583084982854 1.1936255075800402 1.1182700455362946 1.091077200841878 1.0 14.934388574025474 -10.403173179759706 0.4629590795239994 0.9741707699063609 1.1557641070441664 0.19259663465154986 0.0709596511834617 1.0349141303679674 0.3443217943442972 0.08450957681686716 0.017157159714964162 3.952089946562489e-11 10.403173179759706 0.18159333713780557 QASES(ph)EDDFIKEK ddPTM_A549_PD325901_60min_R1 1 QASESEDDFIKEK 13 1 Q9NPG3;Q9NPG3-2 Q9NPG3 UBN1 Ubinuclein-1 1 QAS(0.008)ES(0.992)EDDFIKEK 84.208 0.00011003 9528600.0 6314.1 7166.9 7348.4 7901.7 9494.9 7573.5 8242.1 7715.0 9168.8 8198.2 8307.9 True False 6955.102783805254 7770.879815237733 7847.106613518924 8389.77006293726 8828.010979626762 7511.823926985923 8555.757625750182 7561.118272699586 8783.467221360881 7680.564252886436 7286.080968117231 0.9545739080089438 1.0665376694607027 1.07699964464527 1.1514791147188181 1.2116268016038771 1.030982768357435 1.1742605748122839 1.0377483184425036 1.205513260118297 1.0541420396637649 1.0 12.830927312085926 -5.209719337541926 1.756534002588966 1.106158938595176 0.8908031326785302 0.2853248752566766 0.06915666992707944 1.2476464733558248 3.4005748518030394 0.011655544885183835 0.46472879996424604 6.169936046678016e-06 5.209719337541926 -0.21535580591664583 QASGDTPTT(ph)PKHPK ddPTM_A549_MK2206_60min_R1 3 QASGDTPTTPKHPK 14 1 A0A087WWW8;Q9Y6J0-2;Q9Y6J0;B5MEB3 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 QAS(0.001)GDT(0.022)PT(0.156)T(0.822)PKHPK;QAS(0.004)GDT(0.029)PT(0.319)T(0.649)PKHPK;QAS(0.005)GDT(0.028)PT(0.241)T(0.726)PKHPK 65.71600000000001 0.0025601 20963400.0 3474.0600000000004 3539.9900000000002 3564.2200000000003 2904.21 4290.83 3084.6499999999996 2852.1 2736.19 4428.87 4798.6900000000005 5343.639999999999 True False 4060.396395387714 3720.160370480195 4069.6799907744726 3615.741580374941 3659.654591028132 3411.065615575045 3370.2896518196208 3124.0533117304376 3425.7380164520964 3714.6625961650525 4016.6667110386607 1.0108870582238938 0.9261809948673105 1.0131983267593798 0.9001846158751754 0.9111173155020846 0.8492279447036782 0.8390762525945563 0.7777726001375393 0.8528808245497279 0.9248122543890346 1.0 11.971783041220938 -6.279272116071944 22.908078756247154 0.9028782995663079 0.9776980089166126 0.319968305831172 0.060381286369432616 387.4298360217227 497695.83083372324 0.011204780410409454 0.026110162801659367 5.256877827691278e-07 6.279272116071944 0.07481970935030469 QASGDTPTT(ph)PKHPK ddPTM_A549_PD325901_60min_R1 2 QASGDTPTTPKHPK 14 1 A0A087WWW8;Q9Y6J0-2;Q9Y6J0;B5MEB3 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 QASGDTPT(0.145)T(0.855)PKHPK;QAS(0.002)GDT(0.018)PT(0.188)T(0.793)PKHPK 97.579 2.3595e-05 19298200.0 2708.4 2853.3 3172.0 2941.1 3979.3 2747.6000000000004 3160.2 4087.7 4006.0 4496.2 5041.8 True False 2983.3547741813013 3093.757604657223 3387.2709947855365 3122.765067277266 3699.8076958397446 2725.2244565638757 3280.4631403277926 4006.1676167613873 3837.6417512402577 4212.309164673709 4421.690562603479 0.6747090805976054 0.6996775465978397 0.766057901797434 0.7062378117745515 0.8367405279625241 0.6163308847553709 0.7419024678190654 0.9060262268562203 0.86791278062223 0.9526467546823344 1.0 12.11038235110573 -8.904600560084559 0.4687999024335656 0.9924801084328345 0.7025365020047487 0.7097178087728553 0.06358921974923396 0.31319187073771265 0.1682648861605417 0.02979860235598161 0.025186990608457555 1.2456597736572468e-09 8.904600560084559 -0.2899436064280858 QASGT(ph)PQPALR ddPTM_A549_MK2206_60min_R1 2 QASGTPQPALR 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 QAS(0.058)GT(0.942)PQPALR;QAS(0.148)GT(0.852)PQPALR 132.04 8.354699999999999e-08 163833000.0 10849.599999999999 12307.9 12356.6 12333.0 15869.7 13194.2 11695.0 12019.099999999999 16514.1 17488.9 17487.7 True False 12680.74723274743 12934.319538708633 14108.951684801685 15354.585553649415 13535.288152464476 14590.401486398867 13819.830117467995 13722.84423195001 12773.682717598758 13538.145343431444 13145.02145403335 0.9646806037624636 0.9839709721234371 1.0733304418055982 1.168091326997271 1.0296893162020195 1.109956460506348 1.0513356836878793 1.0439575378356925 0.9717506176971166 1.0299066753730912 1.0 13.682228876134717 -8.664019199479286 4.959951049474182 0.9867216743784242 1.0572707082460084 0.14404880733250236 0.054247676477132974 0.2173327735883789 8.910062604556607 0.009323976642228136 0.010541620290317154 2.1676082761323503e-09 8.664019199479286 0.07054903386758427 QASSET(ph)PGCTDR ddPTM_A549_PD325901_60min_R1 1 QASSETPGCTDR 12 0 Q92609;Q92609-2 Q92609 TBC1D5 TBC1 domain family member 5 1 QAS(0.025)S(0.02)ET(0.632)PGCT(0.323)DR 48.70399999999999 0.034705 2046000.0 345.22 357.81 503.33 256.11 394.4 399.02 287.45 376.75 213.15 377.49 517.28 True False 380.2664802624682 387.96390443430414 537.4890005691685 271.9293330319884 366.6987046061354 395.77051341465915 298.3890670486754 369.23542569534254 204.1920467490917 353.6552169771535 453.65783930808976 0.8382230996877368 0.8551905661456645 1.184789402931814 0.5994150425058891 0.8083155912513652 0.8723987091643357 0.657740352296728 0.8139072968704637 0.4501014400203499 0.7795637732537404 1.0 8.825460778827635 -6.278534979977872 24.779902242367367 0.7412414119424362 0.9489800221340504 0.25492455923042945 0.16065927773278144 980.390502942976 1421064.9245667765 0.029874272503379585 0.06958759883716478 5.265808000640378e-07 6.278534979977872 0.20773861019161421 QASTDAGTAGALT(ph)PQHVR ddPTM_A549_MK2206_60min_R1 2 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QASTDAGT(0.001)AGALT(0.999)PQHVR;QASTDAGT(0.013)AGALT(0.987)PQHVR 123.2 1.6358000000000002e-10 30864000.0 1931.0900000000001 1962.95 2384.9 1646.13 2898.8 2183.52 1623.73 1822.06 2936.1000000000004 3051.3999999999996 3242.0 True False 2257.0107813823784 2062.8557705626577 2723.114681472537 2049.4319238975845 2472.39036001714 2414.5786370967294 1918.7407230984436 2080.342584824725 2271.078037988246 2362.0866207106615 2436.9219253518822 0.9261727911354709 0.8465005583897766 1.117440264763234 0.8409920328496591 1.014554604436142 0.9908313483404165 0.7873624112193848 0.8536763378352104 0.9319453423442405 0.9692910536596634 1.0 11.250844315078286 -10.255497577696591 1.0622501145281635 0.9935581144014894 0.9245526625040182 0.06277654944688638 0.08915686672880443 0.8756056395302222 1.955812720434978 0.03494765833222625 0.015800247643803028 5.5526771414976284e-11 10.255497577696591 -0.0690054518974712 QASTDAGTAGALT(ph)PQHVR ddPTM_A549_PD325901_60min_R1 2 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937-7;P46937;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QASTDAGT(0.009)AGALT(0.991)PQHVR;QASTDAGTAGALT(1)PQHVR 139.55 1.4481e-13 36424000.0 4825.6 5533.6 5029.6 4876.299999999999 5837.1 4986.2 4575.1 5242.200000000001 5378.700000000001 5298.7 6442.8 True False 5315.491359581038 5999.935892170891 5370.9389014417775 5177.497976119182 5427.122232901813 4945.59404036934 4749.20793409078 5137.640208573656 5152.651943933094 4964.1391777182 5650.376444274208 0.9407322524444323 1.0618648069458998 0.9505453228491356 0.9163102719228174 0.9604886128253227 0.875268062074155 0.8405117749107454 0.9092562697800195 0.911913037078179 0.8785501685907309 1.0 12.464131271870606 -4.865944065122416 17.023564089664426 0.9456385219207264 0.0021442258763640443 0.0 0.060703471594811785 3724.8428519067706 469768.7408772366 0.008584463928397573 940.1214409254352 1.3616200407747529e-05 4.865944065122416 -0.9434942960443623 QASVHDS(ph)GEEGEA ddPTM_A549_MK2206_60min_R1 1 QASVHDSGEEGEA 13 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 QAS(0.001)VHDS(0.999)GEEGEA 60.401 0.0081285 910760.0 314.37 385.08 315.56 347.91 275.99 422.78 301.96 242.61 352.59 489.21 503.74 True False 367.42797039142573 404.678927190335 360.31115304015816 433.1479656182732 235.3922366017423 467.5182989813488 356.8222233664501 277.0007104619641 272.728927970531 378.6971212288993 378.647455483269 0.9703695748396781 1.0687485716069105 0.9515742092609386 1.1439347058742149 0.6216659670967823 1.2347060364756806 0.942360019060571 0.7315530751644089 0.7202713870675459 1.0001311661940706 1.0 8.564711423584301 -8.008424650922457 24.9418919303046 0.8531775501626188 0.9973327679967541 0.12618426011005068 0.16582947887753646 607.2399621381195 1797788.7544747756 0.026517961945807522 0.03570431433952234 9.807884640673927e-09 8.008424650922457 0.14415521783413532 QASVHDS(ph)GEEGEA ddPTM_A549_PD325901_60min_R1 1 QASVHDSGEEGEA 13 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 QASVHDS(1)GEEGEA 77.078 0.00094356 1074600.0 509.4 358.12 426.01 287.75 405.45 426.89 267.39 498.63 469.67 511.96 501.84 True False 561.1139129995403 388.3000292222491 454.92160040623776 305.5236639723346 376.97259072656607 423.41354937492844 277.56567277142227 488.6844334823321 449.93140322142074 479.6347582283598 440.11686142586603 1.2749202818125958 0.8822657417947051 1.0336381999371897 0.6941875914104179 0.8565283990830783 0.9620480069842743 0.6306635739248446 1.1103515368602774 1.0222998540972916 1.0897895542435385 1.0 8.781742834012286 QAT(ph)TPKPDKEK ddPTM_A549_PD325901_60min_R1 1 QATTPKPDKEK 11 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 QAT(0.555)T(0.445)PKPDKEK 48.625 0.010337 11701000.0 3342.2 2936.2 2848.8 2383.9 3712.8 2942.3 3108.3 3540.0 3025.9 3894.8 3677.1 True False 3681.4976836024016 3183.6438785947976 3042.136699226049 2531.148088770283 3452.025736464657 2918.3388843164553 3226.588057427023 3469.3919229237245 2898.7319458506986 3648.8816633092742 3224.840011057411 1.1416063032520036 0.9872253717017405 0.9433449996883863 0.7848910581893737 1.0704486810596079 0.9049561759063962 1.0005420567729308 1.0758338122287578 0.8988762034431026 1.1314923068424785 1.0 11.65501187280123 -5.274596885576855 3.238699319557929 0.9560937424004107 1.1651011043379818 0.164129380604511 0.09413886408396253 0.28666513990330134 4.801418814787109 0.010453402096648705 0.14737046612702545 5.313774427318796e-06 5.274596885576855 0.20900736193757108 QATPGVPAQQS(ph)PSM ddPTM_A549_MK2206_60min_R1 2 QATPGVPAQQSPSM 14 0 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 QATPGVPAQQS(0.98)PS(0.02)M;QATPGVPAQQS(0.996)PS(0.004)M 75.669 0.00029825 10929300.0 5116.3 6659.0 5274.2 4854.9 7709.1 5582.6 5446.799999999999 5769.6 7972.4 7531.599999999999 8505.7 True False 5979.806358474575 6997.914657111358 6022.160867551031 6044.35071794474 6575.101602183017 6173.347026570034 6436.413055478805 6587.4584686589515 6166.664129306736 5830.206329076626 6393.499944622304 0.9352946602438474 1.0945358125790614 0.9419192804742864 0.945389969546924 1.0284041071609709 0.9655661343615958 1.006711990494752 1.0303368304866867 0.9645208700586032 0.9118958910730148 1.0 12.64239019555791 QATS(ph)PASK ddPTM_A549_MK2206_60min_R1 4 QATSPASK 8 0 E9PKP7;P17480-2;P17480 E9PKP7 UBTF Nucleolar transcription factor 1 1 QAT(0.09)S(0.897)PAS(0.012)K;QAT(0.072)S(0.912)PAS(0.016)K;QAT(0.018)S(0.98)PAS(0.001)K;QAT(0.232)S(0.758)PAS(0.01)K 104.43 0.0020622 144660000.0 14337.5 15071.5 11526.74 9471.84 13296.5 11520.919999999998 9098.23 11142.150000000001 11812.2 21799.1 20500.2 True False 16757.319481779636 15838.57497441865 13161.405058290382 11792.441225207056 11340.602463767043 12740.056107432234 10751.260621603327 12721.583883903279 9136.755560207339 16874.66816986753 15409.434563263012 1.087471406752981 1.0278491990990204 0.8541134331864413 0.7652741037832057 0.7359518882544658 0.8267698633021402 0.6977063679698513 0.8255711026692877 0.5929325649618511 1.095086785993934 1.0 13.911526303845827 -5.772580127900757 2.6086380537323426 0.7913895147545749 1.0807718779549822 0.31740353286143996 0.1315595428861953 0.24087647404828844 3.196991023022008 0.019967379505697824 0.09547814865445363 1.6881843585261097e-06 5.772580127900757 0.28938236320040733 QATS(ph)PASK ddPTM_A549_PD325901_60min_R1 2 QATSPASK 8 0 E9PKP7;P17480-2;P17480 E9PKP7 UBTF Nucleolar transcription factor 1 1 QAT(0.4)S(0.566)PAS(0.034)K;QAT(0.223)S(0.775)PAS(0.002)K 104.14 0.0020848000000000004 321790000.0 26057.0 25418.0 21899.0 18948.6 24138.0 18260.8 15435.4 19940.0 21670.0 26639.0 28878.0 True False 28702.287457850438 27560.064064478745 23385.197829384753 20119.011986607045 22442.630151579368 18112.09009914894 16022.802593574965 19542.281057372602 20759.285259454915 24957.00899375981 25326.18907272469 1.1333046347964635 1.088204150468096 0.9233603114244177 0.7943955535053013 0.8861431969545389 0.7151526053580224 0.6326574656599596 0.7716234369591306 0.8196766280092195 0.9854229912797077 1.0 14.628342385162304 -5.795974851140211 3.0076661431472402 0.8598342347078222 1.124979137725727 0.5000054030124118 0.105649982626714 0.20274455049845236 3.6516567780323004 0.017788427888104676 0.07552135635886267 1.5996506575266327e-06 5.795974851140211 0.26514490301790483 QATS(ph)PASKKPAQEGGK ddPTM_A549_PD325901_60min_R1 1 QATSPASKKPAQEGGK 16 2 E9PKP7;P17480-2;P17480 E9PKP7 UBTF Nucleolar transcription factor 1 1 QAT(0.138)S(0.846)PAS(0.016)KKPAQEGGK 66.874 0.00078874 4379100.0 1433.0 1846.3 2093.6 1945.9 1845.0 3227.2 2733.2 2966.4 2873.5 2810.7 2438.1 True False 1578.477105081157 2001.894180590413 2235.6842858395307 2066.0938235404565 1715.4135649044622 3200.9187531747493 2837.2134216644286 2907.2328249042193 2752.7367878654227 2633.231922322937 2138.229156389294 0.7382169962300212 0.9362393055994512 1.0455774953582635 0.9662639840854811 0.802258990706676 1.4969951857638863 1.3268986690161262 1.3596451139098196 1.2873909139438604 1.2315012703173152 1.0 11.062200761233239 -7.233055722898968 24.99375192244083 1.1960458054991605 0.9118750551861354 0.5934756911362222 0.14957325130692892 619.0612470172626 545126.1210768927 0.02689263508460987 0.046573882982459125 5.847150564623224e-08 7.233055722898968 -0.2841707503130251 QATT(ph)PASR ddPTM_A549_PD325901_60min_R1 1 QATTPASR 8 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 QAT(0.384)T(0.616)PASR 50.473 0.033089 2946300.0 763.6 681.43 616.24 715.0 846.59 641.34 280.36 460.91 911.76 1122.3 905.33 True False 841.1201098673911 738.8564975787932 658.061752152156 759.163926117183 787.128438976948 636.1171396755997 291.0292532188788 451.7167884730999 873.4418979308083 1051.4377864670832 793.9801493597141 1.0593717116803132 0.9305730101371249 0.8288138597455287 0.9561497560479216 0.9913704260890005 0.8011751177766607 0.3665447473133582 0.5689270554652731 1.100080271068709 1.3242620578297701 1.0 9.63295912815266 -8.801073014241563 24.99902616048171 1.0472602002229612 0.8127797803026365 0.30872214498084993 0.20623636089971345 175.59907934197935 110758.83927258194 0.035777306298474545 0.03808810907560559 1.5809822198171176e-09 8.801073014241563 -0.23448041992032465 QATT(ph)PKPDKEK ddPTM_A549_MK2206_60min_R1 1 QATTPKPDKEK 11 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 QAT(0.258)T(0.742)PKPDKEK 47.621 0.010992 8118900.0 2062.5 2507.5 2331.7 1858.9 2785.2 2693.1 2106.6 2182.5 3392.2 3424.5 3661.4 True False 2410.59957671634 2635.1210396015504 2662.370121510131 2314.330583449192 2375.50076953213 2978.0820544649014 2489.341951727926 2491.8760586259305 2623.872116230281 2650.903071581458 2752.173330500735 0.8758894470784481 0.95746914280363 0.96737007513467 0.8409101846169401 0.8631363232852516 1.082083755939552 0.9045004266773454 0.9054211924118 0.9533818554054839 0.9632035316246408 1.0 11.426355617775956 -10.933996363113723 0.1921999210450949 1.061221843509265 0.9040925478996827 0.10503542510080899 0.06235422162832048 12.587815943268865 0.6350864348429195 0.5001295289639599 0.09213001536512352 1.1641357781222187e-11 10.933996363113723 -0.15712929560958233 QATVSWDSGGSDEAPPKPSRPGYPS(ph)PR ddPTM_A549_MK2206_60min_R1 4 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-6;B4DWJ1;E5RG80;E5RHK7;E5RJQ2;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 QATVSWDSGGSDEAPPKPS(0.01)RPGYPS(0.99)PR;QATVSWDSGGSDEAPPKPS(0.098)RPGYPS(0.902)PR;QATVSWDSGGSDEAPPKPS(0.005)RPGYPS(0.995)PR;QATVSWDSGGSDEAPPKPS(0.039)RPGYPS(0.961)PR 170.45 5.6408e-49 166573400.0 16743.14 18532.940000000002 16877.489999999998 14845.73 26073.9 19944.3 18900.440000000002 17544.129999999997 29910.3 29819.300000000003 30770.0 True False 19568.972701528444 19476.187485413015 19270.971866915137 18482.934516450154 22238.463849886473 22054.79258804514 22334.405296741937 20031.064154144766 23135.664806934306 23083.099419596725 23128.95979120217 0.8460809685428274 0.8420693218041477 0.8331966522007384 0.7991251955689214 0.9614986601492375 0.9535574788985701 0.9656467691745279 0.8660598805556405 1.000289896985972 0.9980171883206399 1.0 14.497412762781652 -7.185216411489465 0.47377979269072595 1.002657581418698 0.8077537875323655 0.6317031966262524 0.04489071439626135 0.5372950005785044 0.21293114995096504 0.012072985816367622 0.04385682725095026 6.528051749350209e-08 7.185216411489465 -0.1949037938863325 QATVSWDSGGSDEAPPKPSRPGYPS(ph)PR ddPTM_A549_PD325901_60min_R1 3 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-6;B4DWJ1;E5RG80;E5RHK7;E5RJQ2;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 QATVSWDSGGSDEAPPKPS(0.005)RPGYPS(0.995)PR;QATVSWDSGGSDEAPPKPS(0.033)RPGYPS(0.967)PR;QATVSWDSGGSDEAPPKPS(0.277)RPGYPS(0.723)PR 254.91 3.336599999999999e-125 169591000.0 13570.2 13870.4 13962.0 14971.1 15675.3 14465.2 12671.099999999999 13891.5 16756.1 16595.6 18791.4 True False 14947.836714146757 15039.307286173032 14909.545280326494 15895.830845164963 14574.32100484929 14347.400207121775 13153.305644391974 13614.42313482907 16051.899387907353 15547.750983777174 16480.176928499146 0.9070191891142555 0.912569528314079 0.90469570472532 0.9645424872639763 0.8843546442542093 0.8705853261994315 0.7981289097476849 0.826109039599306 0.9740125641581449 0.9434213632069975 1.0 14.00844411069304 -8.886116057460056 6.906802674666451 0.988602357577054 0.8847729062105854 0.4378171775631725 0.04409362462536394 0.13005731582590346 7.428038322358953 0.008143894433685269 0.0086402893793218 1.2998221773062855e-09 8.886116057460056 -0.1038294513664686 QAVDVS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 QAVDVSPLR 9 0 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 QAVDVS(1)PLR;QAVDVS(1)PLR 78.692 0.0018125 13307500.0 2127.3 2474.55 1952.04 1813.17 3603.1000000000004 2607.66 2768.2 2404.7 3624.2000000000003 3411.1 3299.8 True False 2486.3362325084436 2600.4940253423806 2228.8686246054976 2257.3967313962935 3073.08876299771 2883.6008503753837 3271.14610783881 2745.5735890848923 2803.324486658153 2640.5301408881637 2480.368590153038 1.0024059498169333 1.0484304774968671 0.8986037935869754 0.9101053530342491 1.238964553573911 1.1625694914147684 1.3188145184651696 1.1069216083386588 1.130204800120126 1.0645716734887551 1.0 11.276338809981155 -6.738871542298148 24.996654189899758 1.1041116121517722 0.9661193505644627 0.4244015063849006 0.09370126247665612 258.85586940318916 286713.2962507727 0.015798813922984746 0.03286961501785251 1.8244352627187165e-07 6.738871542298148 -0.13799226158730948 QAVDVS(ph)PLRR ddPTM_A549_MK2206_60min_R1 2 QAVDVSPLRR 10 1 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 QAVDVS(1)PLRR;QAVDVS(1)PLRR 95.417 0.00023326 54500000.0 1201.56 1647.5100000000002 1453.8200000000002 1093.2399999999998 1821.1399999999999 1332.35 1427.8 1504.18 1870.44 1981.11 1966.23 True False 1404.353952678441 1731.3612219158329 1659.993536927503 1361.0838490774079 1553.2527184495698 1473.3383926576478 1687.212778257444 1717.402121358054 1446.7883264789123 1533.575875059349 1477.9608258126568 0.9501970066806452 1.1714527149011842 1.1231647740154111 0.9209201118906625 1.0509430908600124 0.9968724251182589 1.1415815282720567 1.1620078769095523 0.9789084400686978 1.03762958278418 1.0 10.529392315205147 QAVEMKNDKS(ph)EEEQSSSSVK ddPTM_A549_MK2206_60min_R1 13 QAVEMKNDKSEEEQSSSSVK 20 2 P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 QAVEMKNDKS(0.998)EEEQS(0.001)SSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(0.979)EEEQS(0.015)S(0.004)S(0.001)SVK;QAVEMKNDKS(0.998)EEEQS(0.001)SSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(0.997)EEEQS(0.002)SSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(0.979)EEEQS(0.013)S(0.003)S(0.004)S(0.001)VK;QAVEMKNDKS(0.995)EEEQS(0.003)S(0.001)SSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(1)EEEQSSSSVK 188.22 1.3949999999999999e-44 384931900.0 30053.250000000004 39304.32 38658.670000000006 32005.36 46994.299999999996 30340.120000000003 29245.19000000001 25090.070000000003 53369.80000000001 59420.5 60770.59999999999 True False 35125.503868581975 41304.74200567576 44141.05071206419 39846.6746367752 40081.50072297278 33550.6913602583 34558.66246712903 28646.66425761683 41281.62551405782 45997.36778067047 45679.582836764086 0.7689541297717823 0.9042276535947841 0.9663190416997056 0.8723081990299085 0.8774489221191873 0.7344789351547198 0.7565450540698752 0.6271218447853527 0.9037215961795808 1.0069568267521618 1.0 15.479261855073327 -9.194290971178047 2.701253927008812 0.9652864564815858 0.8199005119559194 0.3681690298993411 0.09146404026370637 0.22631442814352154 3.416957816031448 0.01946021550885872 0.01835798161749304 6.39306365715394e-10 9.194290971178047 -0.14538594452566644 QAVEMKNDKS(ph)EEEQSSSSVK ddPTM_A549_PD325901_60min_R1 16 QAVEMKNDKSEEEQSSSSVK 20 2 P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 QAVEMKNDKS(0.999)EEEQS(0.001)SSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(0.999)EEEQSSSSVK;QAVEMKNDKS(0.911)EEEQS(0.066)S(0.017)S(0.005)S(0.002)VK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(0.963)EEEQS(0.027)S(0.008)S(0.002)S(0.001)VK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(0.999)EEEQS(0.001)SSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(0.982)EEEQS(0.017)S(0.001)SSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(1)EEEQSSSSVK;QAVEMKNDKS(1)EEEQSSSSVK 216.14 2.1334999999999997e-67 714429100.0 38352.159999999996 42462.34 47145.53999999999 44979.1 49314.6 60982.5 58521.49999999999 64847.100000000006 54461.99999999999 60336.29999999999 59888.7 True False 42245.64304983202 46040.79041339518 50345.1198535628 47757.35685205225 45850.91262213421 60485.87873868345 60748.56770669352 63553.6737189342 52173.1515367067 56526.655720942596 52522.76956574852 0.8043300724450281 0.8765872552809857 0.9585389397743066 0.9092695843517757 0.8729721033605737 1.1516125147012028 1.1566139449414956 1.2100213725282916 0.9933434959364783 1.0762314361618341 1.0 15.680655372197279 -7.233209485148914 24.34855197652457 1.0375325411638647 0.8894160656911024 0.5784119762655177 0.0823809010991573 454.87737417486267 392336.12637512403 0.014132334636626819 0.024473880386878966 5.8450807435122367e-08 7.233209485148914 -0.1481164754727623 QAVGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 QAVGSPR 7 0 K4DI94;A0A0D9SFM0;Q149N8-2;Q149N8-4;Q149N8 K4DI94 SHPRH E3 ubiquitin-protein ligase SHPRH 1 QAVGS(1)PR 93.098 0.012192 12950000.0 2281.3 2274.1 1826.7 2001.3 3019.1 1923.2 1764.5 2280.4 2427.9 2685.1 2489.5 True False 2512.8958965957036 2465.7463879546444 1950.6708468394488 2124.9157557179255 2807.048831329576 1907.5380968349273 1831.6490130714478 2234.9156330608084 2325.863806249681 2515.5623277579657 2183.3072822407407 1.1509584184671908 1.1293629659971798 0.8934476895242451 0.9732554702685333 1.285686561008804 0.8736919957859574 0.8389332220756466 1.0236376946295447 1.0652938435045358 1.152179699220455 1.0 11.092299476542324 -5.5591824763493625 23.49806678839808 1.0138590045081484 1.145559740813624 0.14316207615019305 0.1214976878579741 102.7832662883633 66527.56138841307 0.015282091000800007 0.059187916171538686 2.759418195258576e-06 5.5591824763493625 0.13170073630547563 QAVKT(ph)PPRR ddPTM_A549_PD325901_60min_R1 2 QAVKTPPRR 9 2 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;B5MCW3;Q9H0E9;H7C2P4 H7C179 BRD8 Bromodomain-containing protein 8 1 QAVKT(1)PPRR;QAVKT(1)PPRR 99.75200000000001 0.00027537 51910000.0 6787.0 7138.299999999999 6802.5 6299.4 8839.9 5546.4 6696.0 6954.1 7152.4 6486.9 6707.0 True False 7476.011243674677 7739.86959286603 7264.158556755545 6688.49963102459 8219.015919999434 5501.231957303057 6950.819944191791 6815.395020114088 6851.809501140991 6077.316026938718 5882.081519175997 1.2709805566791887 1.3158385458673965 1.2349639380334803 1.1370974049270848 1.3972971801232044 0.9352525869232953 1.181693915926128 1.1586706164978204 1.1648613639242527 1.033191397828514 1.0 12.52211106319104 -3.9713076070941433 0.025213788623232668 9.95015763525853e-10 2.6410120069456924 0.41400142852276334 0.10095091542636031 707.6633811769541 1.9041798594319013 75.9423072867429 129.94435569173143 0.00010682979448252913 3.9713076070941433 2.6410120059506768 QAVRVS(ph)PCHSR ddPTM_A549_MK2206_60min_R1 2 QAVRVSPCHSR 11 1 A0A1B0GWK2;Q674X7-4;Q674X7-3;Q674X7-5;Q674X7-2;Q674X7 A0A1B0GWK2 KAZN Kazrin 1 QAVRVS(0.796)PCHS(0.204)R;QAVRVS(0.956)PCHS(0.044)R 73.02199999999999 0.00046719999999999997 15306900.0 2050.13 2425.5 2004.76 2020.8000000000002 3050.8 1925.5300000000002 1822.92 2069.86 2842.7 3084.8 3037.2 True False 2396.1418231338034 2548.947589851868 2289.065113350196 2515.8960907171586 2602.0313613703242 2129.2883065366304 2154.1209677413212 2363.268993680397 2198.8329888590947 2387.9415375133544 2282.9794175443362 1.0495678606297683 1.116500468757453 1.0026656814157378 1.1020231156631963 1.1397524398924161 0.9326795897384734 0.943556893762266 1.035168769161495 0.9631418364797381 1.0459759379179685 1.0 11.156702137505222 -7.265441857928853 24.999780587732523 0.9801978016746365 1.0807065536406997 0.5063225844682764 0.04662632803310608 187.72903713387177 1172567.1365329397 0.006170874801542778 0.010090028573894934 5.4269790126873354e-08 7.265441857928853 0.10050875196606313 QAVRVS(ph)PCHSR ddPTM_A549_PD325901_60min_R1 1 QAVRVSPCHSR 11 1 A0A1B0GWK2;Q674X7-4;Q674X7-3;Q674X7-5;Q674X7-2;Q674X7 A0A1B0GWK2 KAZN Kazrin 1 QAVRVS(0.825)PCHS(0.175)R 74.789 0.00038403 12249000.0 1815.9 1705.6 2038.8 1524.2 2006.3 1838.3 1890.6 1939.2 1695.6 1812.9 2102.4 True False 2000.2488312050755 1849.3368978037197 2177.1652283003614 1618.3463722906422 1865.384409359254 1823.329494286423 1962.547817576017 1900.521134727029 1624.3398286078334 1698.4331846085508 1843.8181282116627 1.084840636177678 1.0029931203667086 1.1807917467499982 0.8777147526260045 1.0116965338487633 0.9888879311838028 1.0643933843298912 1.0307530366730708 0.880965320686643 0.921150062807918 1.0 10.848480641911243 -6.332758159202582 0.46190092659417575 0.9523201409050902 1.1029802068948766 0.1905452462102022 0.07692175079091611 2.5295098128977824 0.6490849080893295 0.019168398904040734 0.1751585753421598 4.647740167759654e-07 6.332758159202582 0.15066006598978643 QAVRVSPCHS(ph)R ddPTM_A549_PD325901_60min_R1 1 QAVRVSPCHSR 11 1 A0A1B0GWK2;Q674X7-4;Q674X7-3;Q674X7-5;Q674X7-2;Q674X7 A0A1B0GWK2 KAZN Kazrin 1 QAVRVS(0.005)PCHS(0.995)R 88.681 8.4781e-05 12295000.0 1996.9 1946.5 2071.2 2062.2 2128.8 1774.0 1738.5 2085.9 1845.8 1842.9 2318.4 True False 2199.623817959916 2110.538386242343 2211.764087137388 2189.5774104039906 1979.2804319613124 1759.5531321678252 1804.6595688437028 2044.2950881431068 1768.2274449424042 1726.5389794887176 2033.2514975484753 1.0818257459109404 1.038011475111197 1.0877966104066064 1.0768846908727228 0.9734557846620367 0.8653888288238555 0.8875732151283845 1.0054314926648016 0.8696550559900657 0.8491517067959542 1.0 10.989572961145841 -6.8676065010323475 4.16163188300471 0.9333467066417165 1.0699920973949695 0.6622850895247299 0.05156985288040032 0.12517701239376622 3.9443787787680646 0.008185672300241855 0.016032967248680467 1.3564178582939873e-07 6.8676065010323475 0.136645390753253 QAVS(ph)ELDEEQHLEDEELQPPR ddPTM_A549_PD325901_60min_R1 1 QAVSELDEEQHLEDEELQPPR 21 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 QAVS(1)ELDEEQHLEDEELQPPR 46.66 0.0050073999999999995 1234400.0 188.15 188.72 254.9 175.11 262.23 188.1 143.21 232.74 174.96 129.57 198.86 True False 207.25084949129072 204.62409671289763 272.1990468382196 185.92614699633543 243.81186944438892 186.56817596435627 148.6599349175189 228.09781811900208 167.6070396397893 121.38892808744542 174.40148067740256 1.188354873400708 1.1732933454355188 1.5607611000833022 1.0660812412496115 1.3979919694338923 1.0697625687562764 0.8524006467152717 1.307889229111098 0.9610413798597203 0.6960315223010257 1.0 7.446268478495514 -7.430658135174156 5.872852484498794 1.0003294707550694 1.2742072192560059 0.39532799651878925 0.18321097616722481 0.16738449316625828 8.648312256677169 0.022015689188562917 0.03526899226843065 3.7097262645809685e-08 7.430658135174156 0.2738777485009365 QAVTNPNNTFYATK ddPTM_A549_PD325901_60min_R1 2 QAVTNPNNTFYATK 14 0 P38646;D6RJI2;A0A3B3ITI4;D6RA73 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 198.14 7.451699999999999e-31 5409500.0 2775.5 2408.1800000000003 3069.9 2955.8999999999996 3374.5 3032.3 2917.2 2966.3999999999996 3662.6000000000004 3967.3 3120.1 False True 3057.266716784892 2611.125780108446 3278.24187480836 3138.479229664027 3137.486761393012 3007.6059541558616 3028.2156423530914 2907.2328249042193 3508.673659034591 3716.804000936347 2736.3474799434975 1.1172801477859169 0.9542376468073284 1.1980356657320628 1.1469593144394195 1.1465966162520402 1.0991315891715496 1.106663413381849 1.0624501625664333 1.282247113991181 1.3583084853730254 1.0 11.418035729710542 -5.767088187768089 24.998017087955358 1.1320293210105643 1.0357588996402118 0.13770721721258683 0.10262453403473347 203.72842150545108 901592.2507112372 0.014229880570503721 0.04611746287175563 1.7096681149060884e-06 5.767088187768089 -0.09627042137035247 QAYS(ph)PR ddPTM_A549_MK2206_60min_R1 4 QAYSPR 6 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 QAY(0.003)S(0.997)PR;QAY(0.001)S(0.999)PR;QAYS(1)PR;QAYS(1)PR 106.36 0.027652999999999997 3411205000.0 19184.6 21477.1 19282.399999999998 17558.0 28533.0 21725.1 18653.899999999998 19225.8 28218.0 29056.1 30905.9 True False 22422.49146156231 22570.192653888924 22016.9342672758 21859.710788208584 24335.83349743655 24024.035662045768 22043.072170007374 21951.11602654315 21826.668054886533 22492.306829662146 23231.112070552997 0.9651923417813618 0.9715502462965674 0.947734839400295 0.9409670411739455 1.0475535318123603 1.0341319687617474 0.94885996430401 0.9449016456843524 0.93954469284978 0.9681975947321378 1.0 14.50377059698806 QAYS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QAYSPR 6 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 QAYS(1)PR;QAYS(1)PR 98.458 0.034143 3220500000.0 21204.1 22162.0 22293.0 18340.0 24949.0 17657.3 22467.0 23075.0 21684.0 24603.0 23087.0 True False 23356.724622366593 24029.669517545775 23805.937038699223 19472.820146837952 23196.668309377463 17513.504803059164 23321.993979414136 22614.751023012694 20772.696888141225 23049.562381225758 20247.445360551093 1.1535640277796937 1.1868000673489278 1.1757501558730605 0.9617420765968642 1.1456590150662886 0.8649735554877173 1.1518487179055836 1.1169187332182615 1.0259416197074176 1.1383936082195407 1.0 14.305452272822757 -2.000000000081744 0.2665482720825091 1.0088571477375217 2.329128414824963 0.09639452612673582 0.09489319127700707 40.23375086753018 0.4961896566111244 0.03357181550760796 24.739313778223814 0.009999999998117777 2.000000000081744 1.3202712670874415 QAYS(ph)PRR ddPTM_A549_MK2206_60min_R1 2 QAYSPRR 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 QAYS(1)PRR;QAYS(1)PRR 69.812 0.0090913 78566000.0 2117.73 2330.5 2057.66 1958.1000000000001 1750.85 1469.24 1607.12 1015.62 2133.9 2711.7 2956.9 True False 2475.1510504724806 2449.1124956296767 2349.467128801534 2437.83458790245 1493.3022843369695 1624.7140015974207 1899.1129011017674 1159.5872452058045 1650.5750571380802 2099.125086642557 2222.620123711594 1.1136185729926626 1.101903320995699 1.0570709334162403 1.096829171073762 0.6718657265836668 0.7309904127405638 0.8544478117701932 0.5217208432673545 0.7426258043510174 0.9444371821565216 1.0 11.118045677710288 -6.740125361513817 24.797980978978256 0.8232980414618386 1.090517310972228 0.5688842970652286 0.1270646559009277 171.14357698771477 199117.3220459768 0.021853546779036354 0.04545633920808088 1.8191756676557267e-07 6.740125361513817 0.2672192695103893 QAYS(ph)PRR ddPTM_A549_PD325901_60min_R1 2 QAYSPRR 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 QAYS(1)PRR;QAYS(1)PRR 82.645 0.006218899999999999 112149000.0 3199.3 4519.799999999999 4353.1 3286.1000000000004 4053.5 3844.5 4745.1 5035.8 4256.3 4664.2 4169.7 True False 3524.0905807998206 4900.6994082394785 4648.527543316807 3489.074933725417 3768.796143815848 3813.1916666399134 4925.677377118351 4935.357018491323 4077.4225126819547 4369.701616002647 3656.8533339060923 0.9636948105423576 1.340141088733456 1.2711823851987663 0.954119461498484 1.0306117855129244 1.0427521473952108 1.3469715428419864 1.349618529332591 1.1150084896422763 1.194934884450266 1.0 11.836387050064497 -9.7982697339086 1.2715575201420335 1.0222453953169872 1.1614705291603198 0.0 0.1537297836417686 0.5923622849957572 1.9370851441144252 0.042081503082755295 0.028057891401398426 1.591220136684103e-10 9.7982697339086 0.13922513384333257 QCEGIT(ph)SPEGSK ddPTM_A549_MK2206_60min_R1 1 QCEGITSPEGSK 12 0 Q9Y570-2;Q9Y570;Q9Y570-4 Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 1 QCEGIT(0.685)S(0.312)PEGS(0.003)K 106.58 0.00015295 26355000.0 3995.5 6195.9 4437.3 5085.5 6520.2 5092.4 4197.3 5410.7 5907.2 6960.9 6569.2 True False 4669.842719403701 6511.244845171382 5066.5758631800445 6331.44772829677 5561.0872172567115 5631.274387938457 4959.895079268785 6177.683294573804 4569.228631860009 5388.427855444993 4937.886339303392 0.9457169320066803 1.3186299557656385 1.0260616618192162 1.282218198888307 1.1262080240674874 1.1404220350549592 1.0044571175707737 1.2510784716533827 0.925340989623631 1.0912417753635781 1.0 12.269677913445221 -8.776739855083733 24.982739905389007 0.9647443436272378 1.1394124798862435 0.1760165987191985 0.11775691859583357 175.52596304555112 286599.1298195852 0.01737153968522197 0.018526937567812294 1.6720919071515647e-09 8.776739855083733 0.17466813625900568 QCEGIT(ph)SPEGSK ddPTM_A549_PD325901_60min_R1 1 QCEGITSPEGSK 12 0 Q9Y570-2;Q9Y570;Q9Y570-4 Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 1 QCEGIT(0.5)S(0.5)PEGSK 181.72 4.3556e-19 36105000.0 11199.0 15771.0 14099.0 12145.0 13233.0 10745.0 11265.0 11711.0 8728.1 11744.0 10531.0 True False 12335.914235731945 17100.07751832931 15055.842924174409 12895.169066703756 12303.559731371686 10657.496282493395 11693.695739444525 11477.41491789823 8361.288309785354 11002.481835756425 9235.753761509228 1.3356694596106378 1.851508600152952 1.6301693736055294 1.3962227014372608 1.3321662799898146 1.1539389808019134 1.26613333804751 1.2427155610981435 0.9053173704816296 1.1912922453184258 1.0 13.173013993960216 -7.295037024135068 0.5808613651689885 0.9545931601909816 1.6594682036599597 0.5950253035938291 0.16145895288985052 0.3142707515259888 0.2001509186717879 0.03237149864814148 0.09722380909063928 5.0694748853983446e-08 7.295037024135068 0.7048750434689781 QCEGITS(ph)PEGSK ddPTM_A549_MK2206_60min_R1 1 QCEGITSPEGSK 12 0 Q9Y570-2;Q9Y570;Q9Y570-4 Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 1 QCEGIT(0.103)S(0.897)PEGS(0.001)K 172.1 9.8508e-16 28338000.0 6247.2 8113.9 7044.6 6617.5 9918.4 6070.7 6229.1 7099.9 9475.8 9490.1 8368.6 True False 7301.574630624154 8526.862852731014 8043.630208856321 8238.787797070865 8459.416498825027 6713.0974445954735 7360.846839223589 8106.332567531836 7329.546429743208 7346.279818839305 6290.445658389814 1.1607404351209614 1.355526033574172 1.2787059368565112 1.3097303823112232 1.344804002486274 1.0671894821381935 1.1701630121239723 1.2886738090996943 1.1651871469499948 1.1678472747064088 1.0 12.618946515816399 -10.195053848885744 0.2570613113269755 0.898717624217278 1.3030463129838978 0.25128848073248145 0.09496592570927076 1.9004289877130855 0.2201984270961332 0.24862861638125472 0.06595853936798131 6.381843517592358e-11 10.195053848885744 0.40432868876661987 QCRT(ph)PPQQK ddPTM_A549_MK2206_60min_R1 2 QCRTPPQQK 9 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 QCRT(1)PPQQK;QCRT(1)PPQQK 63.32 0.0026850000000000003 31535000.0 2850.5 2931.6 2597.3 2057.98 3711.8999999999996 2975.1 2665.88 3253.6000000000004 3986.7999999999997 3770.1000000000004 3506.8 True False 3331.5947119660236 3080.8059181239914 2965.6361953073992 2562.185192386233 3165.8844271241956 3289.9231072884504 3150.235888290346 3714.8077637321094 3083.796165611369 2918.4317915518354 2635.964777243673 1.2638995561426827 1.168758378230483 1.1250667007805966 0.9720104056418432 1.2010344199039864 1.2480906936581286 1.1950978690938452 1.4092782254915186 1.1698927816615123 1.1071588728145023 1.0 11.364115377301152 -10.260371351191107 1.0047932134627446 1.0141359619062371 1.189862831670081 0.19376456185341395 0.10408927469862692 0.45181812188967296 0.8992010220407682 0.04552180387152644 0.019715809856274268 5.490711800358962e-11 10.260371351191107 0.17572686976384388 QCRT(ph)PPQQK ddPTM_A549_PD325901_60min_R1 1 QCRTPPQQK 9 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 QCRT(1)PPQQK 90.65700000000001 0.00041799999999999997 24017000.0 3640.1 3489.1 3151.7 2895.7 2829.1 2812.6 3048.3 2750.1 2289.4 2916.5 3920.5 True False 4009.640272300012 3783.1387019975136 3365.593314711719 3074.5608123881475 2630.3937758651596 2789.6951181145573 3164.3047245937655 2695.2470980882854 2193.184479602958 2732.3516922669974 3438.3033540971373 1.1661682694524498 1.1002922989588644 0.978852930676179 0.8942087116090125 0.765026673033588 0.8113580539047877 0.920309931589698 0.7838886859347608 0.6378682314315066 0.7946802276800513 1.0 11.747481120968654 -5.9483227499130615 1.4321393805810896 0.8238305416941423 1.1710865161832094 0.6634597629842878 0.08689233668465131 0.34211612733131275 1.2019692827217845 0.019209303014902805 0.11731387774429448 1.1263600802752842e-06 5.9483227499130615 0.3472559744890671 QCRT(ph)PPQQKSPT(ph)TAR ddPTM_A549_PD325901_60min_R1 1 QCRTPPQQKSPTTAR 15 2 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 2 QCRT(0.999)PPQQKS(0.066)PT(0.487)T(0.447)AR 55.383 0.0041984 18644000.0 1723.1 1837.1 1908.5 1422.9 2157.9 1661.2 1828.6 1808.2 1565.0 2005.8 2024.5 True False 1898.027843520823 1991.918864303011 2038.0222867428106 1510.7893013596347 2006.3365483508628 1647.671737969105 1898.1883736483157 1772.134032494542 1499.2284924340993 1879.1534456880306 1775.4993343628746 1.0690107322410891 1.121892205618763 1.1478586599831875 0.8509095284464135 1.1300125601403408 0.9280047061016558 1.0691011463146887 0.9981045884933885 0.844398228384629 1.0583802591862708 1.0 10.794009104152732 -6.68065522001474 0.5497891638528264 0.9339437673097244 1.1250378107402048 0.08510538686654534 0.09732595495036983 1.239682176421764 0.5662606820585278 0.02012983626786248 0.11512715016284418 2.0861463867253662e-07 6.68065522001474 0.19109404343048042 QDAAGKDS(ph)PNR ddPTM_A549_MK2206_60min_R1 3 QDAAGKDSPNR 11 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QDAAGKDS(1)PNR;QDAAGKDS(1)PNR;QDAAGKDS(1)PNR 85.837 0.00010985 102127900.0 9390.349999999999 7115.09 5690.889999999999 4037.71 3141.84 3214.0299999999997 3033.0 3309.62 3362.2799999999997 11625.4 13096.400000000001 True False 10975.21150798461 7477.217689993458 6497.943775271602 5026.949131259692 2679.6794979702827 3554.136521299553 3584.0568402120934 3778.768770286165 2600.728948457858 8999.214065809043 9844.202437747812 1.1148908789095924 0.7595554578725344 0.6600782355262315 0.5106507269683671 0.27220889807131476 0.36103854464340734 0.36407792940837425 0.3838572798743342 0.26418889340240564 0.9141638566169015 1.0 13.265058610573956 -5.3031814024122035 1.5630227919856738 0.5522465133958955 1.2925195261538278 0.36192986679128325 0.2335770317331989 1.151366172351972 2.755448334565848 0.043758673124921724 1.2661535940327282 4.975292263547087e-06 5.3031814024122035 0.7402730127579323 QDAAGKDS(ph)PNR ddPTM_A549_PD325901_60min_R1 4 QDAAGKDSPNR 11 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QDAAGKDS(1)PNR;QDAAGKDS(1)PNR;QDAAGKDS(1)PNR;QDAAGKDS(1)PNR 122.64 6.7498e-06 171662900.0 17605.300000000003 19501.7 15348.100000000002 12779.63 15321.900000000001 10356.82 8950.39 11473.4 13316.5 17429.4 18660.800000000003 True False 19392.577095663142 21145.176700222095 16389.71436162291 13568.998720454454 14245.742601685479 10272.477491712732 9291.001989291335 11244.55403629182 12756.853814376167 16328.904709479995 16365.63990055755 1.1849568494417668 1.2920470466603458 1.0014710369537425 0.8291150729762898 0.8704665804848944 0.6276856605749199 0.5677139449325661 0.6870830657778764 0.7794900713867939 0.9977553464880831 1.0 13.998382392766986 -5.974870858840086 2.928025666522089 0.8311562063770763 1.2397264064386868 0.6106871553671296 0.13497094963437425 0.1616026401379271 2.7964324365265254 0.022587584118759416 0.08049844357165824 1.0595687501217643e-06 5.974870858840086 0.4085702000616105 QDAAGKDS(ph)PNRHSK ddPTM_A549_PD325901_60min_R1 1 QDAAGKDSPNRHSK 14 2 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QDAAGKDS(0.77)PNRHS(0.23)K 41.348 0.02428 2981000.0 457.05 333.81 328.21 338.98 350.82 578.46 360.94 401.9 360.28 476.59 504.84 True False 503.4493795375733 361.9413402062969 350.48430428706183 359.9180247205632 326.17961346329747 573.7492135478017 374.6757692139467 393.8837892155495 345.1386845074487 446.498026064642 442.74788044443255 1.1371017271323993 0.8174885893140321 0.7916114786032266 0.8129186849167425 0.7367163748720305 1.2958824624340817 0.8462508478591592 0.8896344999329346 0.7795377454116703 1.0084701605266748 1.0 8.790341590191495 -5.25021417568416 23.500758902129245 0.8902531666726677 1.1371020624254653 0.17108339328222888 0.15055300813698835 942.2087075878488 1972491.0772324754 0.020244504953386214 0.40287957601603347 5.620640705853888e-06 5.25021417568416 0.24684889575279756 QDDES(ph)PEPFS(ph)VK ddPTM_A549_PD325901_60min_R1 1 QDDESPEPFSVK 12 0 C9JUY3;Q8WXX0-4;Q8WXX0 C9JUY3 DNAH7 Dynein heavy chain 7, axonemal 2 QDDES(1)PEPFS(1)VK 40.236999999999995 0.03779 1848600000.0 6854.0 5822.0 6286.6 5106.3 6744.1 4949.6 5808.2 5160.2 5226.6 5908.7 4798.9 True False 7549.81303435188 6312.640372310774 6713.24648039683 5421.704553751289 6270.417681881948 4909.292098634653 6029.234229368993 5057.275762901412 5006.944177991099 5535.623673614949 4208.665722733515 1.7938732918537184 1.4999148870893775 1.595100899587862 1.2882240859532812 1.489882564921153 1.1664723268746757 1.4325761717785046 1.2016339847529462 1.1896749487481522 1.315291837912843 1.0 12.039147211469562 -2.0000000004541163 0.1368124924479098 0.9081932927729245 3.6835210546079296 0.6111038125193138 0.13473962040891932 18.07362088651525 0.15857690774236227 0.21346869410972397 9.841107947569938 0.009999999989543585 2.0000000004541163 2.775327761835005 QDDGSSSAS(ph)PSVQGAPR ddPTM_A549_MK2206_60min_R1 2 QDDGSSSASPSVQGAPR 17 0 Q9NQA3 Q9NQA3 WASH6P WAS protein family homolog 6 1 QDDGSS(0.002)S(0.087)AS(0.903)PS(0.009)VQGAPR;QDDGS(0.005)S(0.009)S(0.177)AS(0.797)PS(0.013)VQGAPR 202.35 2.2503e-48 28601000.0 1467.58 2094.1 1649.17 970.3399999999999 2299.0 1885.54 1573.04 1282.62 2231.6000000000004 2651.0 2694.2 True False 1715.2716251138734 2200.680745375715 1883.0471043834393 1208.0733435602185 1960.8201454668842 2085.0665912798436 1858.8410062404323 1464.435312859011 1726.146163132922 2052.1372588005393 2025.1557838627539 0.8469825574811772 1.086672325611498 0.9298282726634203 0.5965335374130855 0.9682317583128559 1.0295833080568333 0.9178755634763588 0.7231223022585292 0.8523522866179188 1.0133231601997161 1.0 10.983817175356485 -10.814094540641282 1.1501344494006331 0.9977896937472768 0.8838684164370314 0.11673616197648595 0.1293673528322464 0.9491094362509168 2.2951317185870996 0.08214919490488135 0.02209473867947296 1.5342829516536352e-11 10.814094540641282 -0.11392127731024537 QDDGSSSAS(ph)PSVQGAPR ddPTM_A549_PD325901_60min_R1 2 QDDGSSSASPSVQGAPR 17 0 Q9NQA3 Q9NQA3 WASH6P WAS protein family homolog 6 1 QDDGSS(0.058)S(0.113)AS(0.823)PS(0.006)VQGAPR;QDDGS(0.001)S(0.019)S(0.019)AS(0.961)PS(0.001)VQGAPR 260.96 3.033999999999999e-87 33987000.0 3523.9 4532.4 4025.8 2932.5 4986.8 3511.8 4461.299999999999 4199.1 3676.0 3845.5 4349.9 True False 3881.6437338419296 4914.361254459185 4299.014997102018 3113.6338648092838 4636.544371526055 3483.201065133581 4631.07721281703 4115.345656369777 3521.510503634348 3602.6944737228637 3814.8898762880094 1.0174982397182257 1.2882052729765796 1.1269040880637624 0.8161792255557672 1.2153809210444464 0.9130541583346645 1.2139478105520554 1.0787587033505983 0.9230962407388998 0.944377056888568 1.0 11.897425696315272 -8.743020131937383 19.501293932277118 0.9636844562497204 1.086115717573758 0.15981619301785766 0.1301998170838795 24.856265606918992 26315.323837013613 0.020920790118658265 0.023668788856217284 1.8070903554943223e-09 8.743020131937383 0.12243126132403748 QDDS(ph)PPRPIIGPALPPGFIK ddPTM_A549_PD325901_60min_R1 2 QDDSPPRPIIGPALPPGFIK 20 1 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK 203.33 1.1019999999999998e-69 56112000.0 22990.0 25265.0 26645.0 21360.0 29722.0 22129.0 25614.0 29536.0 28360.0 28031.0 27341.0 True False 25323.927875656496 27394.17021752522 28453.289929401188 22679.35868792031 27634.429255333576 21948.78876084657 26588.754786518606 28946.881309456236 27168.12782455659 26261.117876199616 23978.23032887892 1.0561216373485596 1.1424600498783353 1.186630103187081 0.9458312134321992 1.1524799318509842 0.9153631631610392 1.1088706056216175 1.2072150826991253 1.1330330659071124 1.095206673553854 1.0 14.549437566660158 -10.9041852664876 1.219365384122221 1.001220622894079 1.0972429064557354 0.0 0.09166896080372157 0.7231079920411514 1.9480319950274596 0.05621610302486028 0.014123727229333088 1.2468515040823934e-11 10.9041852664876 0.09602228356165643 QDDS(ph)PSGASYGQDYDLS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 QDDSPSGASYGQDYDLSPSR 20 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 QDDS(0.625)PS(0.358)GAS(0.014)Y(0.003)GQDYDLS(0.918)PS(0.082)R;QDDS(0.67)PS(0.329)GAS(0.001)YGQDYDLS(0.898)PS(0.101)R 103.84 1.6539999999999999e-09 8573700.0 1350.9299999999998 1764.5500000000002 1030.38 995.2 1606.28 1808.2 1637.7399999999998 2155.3 2673.32 2323.1 1919.6100000000001 True False 1578.9339569325584 1854.3580579975742 1176.503377707943 1239.0240446762252 1369.9983398262486 1999.5425238139828 1935.2961587500674 2460.8203753294247 2067.817288414816 1798.3100965369783 1442.9178584592014 1.0942646164339527 1.2851445750194839 0.8153640699715607 0.8586934019926116 0.9494638463267626 1.3857632380745255 1.341237927997263 1.7054473065827707 1.4330803907458076 1.246301087753725 1.0 10.494773457972423 -7.253141313474523 24.468942615623682 1.2737391187214429 0.9982218545604258 0.3992560662176279 0.2025708490657914 576.329773063047 1699451.8031256683 0.037599047289832835 0.06441901450834177 5.5828850574773134e-08 7.253141313474523 -0.2755172641610171 QDDS(ph)PSGASYGQDYDLS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 QDDSPSGASYGQDYDLSPSR 20 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 QDDS(0.778)PS(0.217)GAS(0.004)YGQDYDLS(0.954)PS(0.046)R 111.47 3.6969000000000004e-10 6245100.0 1943.7 1845.1 1556.1 1979.8 1793.9 1221.5 1605.2 1712.2 2012.8 2003.7 1553.3 True False 2141.022993123688 2000.5930523790128 1661.7063035894612 2102.087749547969 1667.9026526190328 1211.5525089870346 1666.286764399144 1678.0488278050852 1928.209015700547 1877.1860400464197 1362.2539471799726 1.5716768503815752 1.468590387658981 1.219821243336744 1.543095363312795 1.224369843869265 0.8893734618975354 1.2231836566512106 1.2318179229936133 1.415454893481622 1.3780000740188112 1.0 10.411779955843528 -14.99999999992717 0.05175193231268551 8.21687984195736e-34 1.8437985086662236 0.11775050087041594 0.1921628433389701 393.8778855513293 1.5530038520644784 57.58857707760759 12.865294832984407 1.0000000001676987e-15 14.99999999992717 1.8437985086662236 QDDSPS(ph)GASYGQDYDLS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 QDDSPSGASYGQDYDLSPSR 20 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 QDDS(0.498)PS(0.5)GAS(0.002)YGQDYDLS(0.973)PS(0.027)R 115.83 4.3594999999999996e-14 7093000.0 1453.9 1432.1 1534.3 1386.4 2026.8 1258.9 1474.8 1188.6 1306.9 1674.7 1314.5 True False 1601.498857695389 1552.7880929553862 1638.4268244954114 1472.0347792571488 1884.4445600804156 1248.6479357869641 1530.9243210415266 1164.8924405613384 1251.9755378671732 1568.9591561939103 1152.82483330205 1.389195315222519 1.346941918754228 1.4212279065870277 1.2768937107650449 1.634632171032245 1.0831202622608735 1.3279765293192738 1.0104678585251525 1.0860067390126606 1.360969256448026 1.0 10.17095760309432 -7.913746358352955 1.1390184898008875 1.0350597523223866 1.3948876345802166 0.32388798268676466 0.156126416283216 0.19730709979825944 0.5143890941126361 0.019862877542183747 0.030576664214623874 1.2197017351536268e-08 7.913746358352955 0.35982788225783 QDDSPSGASYGQDYDLS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 QDDSPSGASYGQDYDLSPSR 20 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 QDDSPSGASYGQDYDLS(0.904)PS(0.096)R;QDDSPS(0.001)GAS(0.033)Y(0.186)GQDY(0.186)DLS(0.489)PS(0.105)R 139.98 5.2360000000000005e-18 18108700.0 1026.3400000000001 1165.65 893.2 925.6500000000001 1607.01 1075.08 1360.38 1210.9 1598.4 1785.46 1830.99 True False 1199.5611003961444 1224.9766061063003 1019.8691909477418 1152.4342915540076 1370.620957793275 1188.8442520196527 1607.5434369560594 1382.548783225722 1236.3649521203 1382.123345944176 1376.3046502467757 0.8715810850316166 0.8900475675110581 0.741019941162646 0.8373395318742638 0.9958703238759807 0.863794401774701 1.1680142450058726 1.0045368828608017 0.898322149749778 1.0042277672289757 1.0 10.426584136062722 -6.752330924681391 24.238122283706016 0.967361379999317 0.8322165019740391 0.4400898565053677 0.08180373350857048 113.92611858776357 303160.17501159094 0.01202646720849917 0.02474346023199481 1.7687606804784922e-07 6.752330924681391 -0.13514487802527797 QDDSPSGASYGQDYDLS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 QDDSPSGASYGQDYDLSPSR 20 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 QDDSPSGASYGQDYDLS(0.983)PS(0.017)R;QDDSPSGASYGQDYDLS(0.998)PS(0.002)R 257.86 9.0259e-98 21847000.0 2752.85 2327.77 2523.7 2591.76 2732.08 2045.8000000000002 2089.35 2668.55 2326.7599999999998 2232.72 2345.87 True False 3032.3173054589397 2523.939347209525 2694.9734582409387 2751.847128885972 2540.1881259643287 2029.1396830828276 2168.8613575861896 2615.3236768130223 2228.9743687258565 2091.7456781616215 2057.3428616951524 1.4738998355191293 1.2267956859314735 1.3099291850753594 1.3375734206103989 1.2346936299530233 0.9862914543135087 1.0542051098858414 1.2712143053579898 1.0834238717455622 1.0167219655542115 1.0 11.006566527551707 -2.0000000000000013 0.17417433468441737 0.9805379934590351 2.8124646413357173 0.6440109949825883 0.09231034194094641 24.617418531758005 0.25355876574135605 0.10833149422166652 11.95454972276933 0.009999999999999969 2.0000000000000013 1.8319266478766822 QDDSSSSAS(ph)PSVQGAPR ddPTM_A549_MK2206_60min_R1 2 QDDSSSSASPSVQGAPR 17 0 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3 C4AMC7 WASH3P;WASH2P;WASH1;WASH4P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4 1 QDDSS(0.003)S(0.026)S(0.287)AS(0.677)PS(0.007)VQGAPR;QDDSS(0.003)S(0.058)S(0.259)AS(0.634)PS(0.046)VQGAPR 144.17 2.8310000000000005e-16 8406800.0 1697.16 1456.29 1981.7 1765.97 2312.34 1784.55 1851.4699999999998 1805.04 2396.88 2794.95 2628.54 True False 1983.5991164217694 1530.4089406824883 2262.734858599575 2198.632729277406 1972.1978491382747 1973.3898965115804 2187.8581331841347 2060.9099477031596 1853.9905070308475 2163.5688538229215 1975.8009739865643 1.0039468258887791 0.7745764683952906 1.1452240829875013 1.112780466365109 0.9981763725720716 0.9987796961805728 1.1073271862852176 1.0430756816284341 0.9383488172343896 1.095033802649413 1.0 10.948221913617136 -8.752974544992838 24.943839213862557 0.970886940797039 1.0229508207788214 0.0 0.10050428910384664 429.08397304095706 1264406.0654154762 0.01611263993060707 0.01812257983370892 1.7661413352936856e-09 8.752974544992838 0.05206387998178241 QDDSSSSAS(ph)PSVQGAPR ddPTM_A549_PD325901_60min_R1 2 QDDSSSSASPSVQGAPR 17 0 C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3 C4AMC7 WASH3P;WASH2P;WASH1;WASH4P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4 1 QDDSS(0.001)S(0.015)S(0.164)AS(0.742)PS(0.078)VQGAPR;QDDSSS(0.001)S(0.002)AS(0.914)PS(0.083)VQGAPR 164.99 9.010700000000002e-23 10418700.0 3363.6000000000004 3212.0 2949.0 2767.12 4007.5 3317.5 3503.8 3833.2 2799.0 3824.3 3021.0 True False 3705.070195848552 3482.6865125149793 3149.1368737775974 2938.038717814516 3726.027025124465 3290.483379913621 3637.1390263529265 3756.7438189127706 2681.367763784695 3582.833045340879 2649.4361516968356 1.3984372461573131 1.3145010157291344 1.1886064405668835 1.1089298060392376 1.4063471666369938 1.241956096132464 1.3727973871057488 1.4179408764037427 1.0120522293271377 1.3523002028360818 1.0 11.371469645204215 -8.777401448164255 24.7132165444171 1.0056912749056803 1.2993895215886113 0.1372834573022308 0.13914639221254868 85.87003676334434 132947.44502856696 0.016131345505395214 0.01720078107634918 1.669546624406028e-09 8.777401448164255 0.293698246682931 QDEHGYISR ddPTM_A549_MK2206_60min_R1 2 QDEHGYISR 9 0 P04792 P04792 HSPB1 Heat shock protein beta-1 0 ; 89.171 0.00118 18285500.0 1534.27 1722.84 1152.23 1140.99 1822.14 1700.68 1436.59 1395.3600000000001 2427.25 2478.0 2388.66 False True 1793.2172666999152 1810.5251971553866 1315.6335399526615 1420.5326012209882 1554.1056197742619 1880.6448287799813 1697.59980747784 1593.1565531107806 1877.4817505217704 1918.2180789542579 1795.4897983377646 0.9987343110275796 1.0083739817578143 0.7327435339207462 0.7911671804184542 0.8655608186763455 1.0474271870110605 0.9454800629050917 0.8873102785578059 1.045665507127867 1.0683536496448562 1.0 10.810161740544453 -7.252266130337614 24.344454305432112 1.0061546262954835 0.8734457777430638 0.31110658141461467 0.08816741114102147 425.89328121710093 1130256.6892114661 0.013433909739925332 0.023049370263458005 5.5941469397045653e-08 7.252266130337614 -0.1327088485524197 QDEHGYISR ddPTM_A549_PD325901_60min_R1 2 QDEHGYISR 9 0 P04792 P04792 HSPB1 Heat shock protein beta-1 0 ; 117.52 3.9407e-06 8977700.0 1356.1 1483.9 1336.5 1362.5 1559.5 1525.5 1556.2 1735.6 1524.8 1890.2 1607.1 False True 1493.770273691945 1608.9534607475034 1427.2029270273858 1446.6585305379872 1449.9660999829318 1513.0768337779127 1615.4220425853155 1700.9820964481405 1460.7179586348343 1770.852449416449 1409.4368882462709 1.059834807893107 1.1415576491328294 1.0126050615882636 1.0264088747797926 1.0287556059264849 1.0735328742960593 1.1461471287269536 1.2068522618026782 1.0363840841801517 1.2564255016908767 1.0 10.460903163029707 -8.983080237905556 23.01015233151721 1.0160515803991044 1.0862289287742721 0.0 0.09165084767278485 48.558121545255055 66039.3045514207 0.010712998585027415 0.010852829481207292 1.0397280535367167e-09 8.983080237905556 0.07017734837516776 QDFS(ph)PERPK ddPTM_A549_MK2206_60min_R1 2 QDFSPERPK 9 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 QDFS(1)PERPK;QDFS(1)PERPK 87.719 0.0003176 20965000.0 5379.2 6677.9 6437.9 6116.5 7699.0 6297.7 5729.0 6354.3 8312.2 8800.9 7978.0 True False 6287.077451186684 7017.776586382924 7350.89102597679 7615.042774580119 6566.4872988036295 6964.11843392507 6769.885142622843 7255.041484227604 6429.499971855828 6812.77057750949 5996.842418401397 1.0483979755570527 1.1702452885619898 1.2257935948792777 1.26984206742089 1.0949908036026208 1.1612975542854975 1.128908293779632 1.209810259806962 1.072147560877507 1.1360596297485501 1.0 12.549987347647908 -9.178061240761899 0.9831402592739069 1.0158729941570999 1.1683949337185078 0.15736595564340294 0.07065813771402006 0.2631071480577068 0.5332229757738246 0.0155406704867702 0.013248408347707833 6.636494812193924e-10 9.178061240761899 0.15252193956140792 QDFS(ph)PERPK ddPTM_A549_PD325901_60min_R1 2 QDFSPERPK 9 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 QDFS(1)PERPK;QDFS(1)PERPK 83.204 0.00040485 125652000.0 22251.5 24726.2 24747.0 19800.2 28591.0 22379.6 26584.0 26406.0 23051.8 24426.4 23906.6 True False 24510.455899311484 26809.96365060646 26426.480235800012 21023.213384483133 26582.866793595404 22197.347957532722 27595.668667322985 25879.311614893726 22083.013010793864 22884.11293536451 20966.239756423565 1.1690439575271028 1.2787206462423724 1.260430126852077 1.0027173984806748 1.2678890970638184 1.0587185978702727 1.3161954164369565 1.234332522929626 1.0532653097238451 1.0914743512056497 1.0 14.355780520373509 -8.857323259064698 4.774608025659732 1.0230825850177552 1.1981198682265597 0.3365324136172727 0.09268975282447707 0.1391835037633984 5.325378875997527 0.015297998985809106 0.01621288073702085 1.3889184306232895e-09 8.857323259064698 0.17503728320880452 QDGGQNES(ph)FKRYEEELEINDFPQTAR ddPTM_A549_MK2206_60min_R1 2 QDGGQNESFKRYEEELEINDFPQTAR 26 2 A0A0C4DG89;Q7L014 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 1 QDGGQNES(1)FKRYEEELEINDFPQTAR;QDGGQNES(1)FKRYEEELEINDFPQTAR 147.3 4.4331e-33 19311600.0 3295.3 3413.6 2817.5 2908.3 4154.2 3439.2 3111.8 3502.0 4533.7 3815.5 4776.200000000001 True False 3851.4660776501078 3587.3376593355347 3217.0638664299845 3620.833630558548 3543.1226830354644 3803.133861243803 3677.173780208373 3998.4192244252035 3506.82418883121 2953.575900020165 3590.1377235859554 1.0727906209133193 0.9992200677338852 0.8960836920809456 1.0085500639072789 0.9869043908144196 1.0593281244500836 1.0242430968735883 1.1137230747881846 0.9767937775179474 0.8226915309171009 1.0 11.809823473925825 -5.261609690844089 11.660476670274203 0.9989866494454153 1.0728558241671216 0.08238838659792902 0.0737584724081473 0.0913989233187835 990.964256911986 0.006980342210993573 0.05534149975008512 5.475077980822121e-06 5.261609690844089 0.07386917472170629 QDGGQNES(ph)FKRYEEELEINDFPQTAR ddPTM_A549_PD325901_60min_R1 1 QDGGQNESFKRYEEELEINDFPQTAR 26 2 A0A0C4DG89;Q7L014 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 1 QDGGQNES(1)FKRYEEELEINDFPQTAR 125.59 1.5226e-18 12765000.0 2344.1 2407.8 2470.1 2049.5 1978.8 1658.7 1987.0 2531.3 2156.6 2228.0 2280.8 True False 2582.0713063647854 2610.7137561748345 2637.7358399179543 2176.092960247785 1839.815914489404 1645.1920971402315 2062.61637232812 2480.8112357335667 2065.9656017785182 2087.323699767141 2000.276059182438 1.2908574766525682 1.3051767250775863 1.3186859022829387 1.0878963182397972 0.9197810002492265 0.8224825216438684 1.031165854762648 1.2402344288155582 1.032840238373362 1.043517813546337 1.0 10.965983405526865 -6.356920996690333 3.8583258320404057 1.0137545284164091 1.3058785708762888 0.6409216819297217 0.09527737148329266 0.11548404336852786 3.1286892057613795 0.014170944063606805 0.03501249044186111 4.3962158053630307e-07 6.356920996690333 0.29212404245987966 QDGS(ph)QEAPEAPLSSELEPFHPKPK ddPTM_A549_PD325901_60min_R1 1 QDGSQEAPEAPLSSELEPFHPKPK 24 1 Q14676;Q14676-2;Q14676-3;H0Y6Z8 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 QDGS(1)QEAPEAPLSSELEPFHPKPK 50.865 0.0034181999999999997 1480200.0 1062.9 1256.6 904.71 1209.0 1101.8 1115.0 857.91 1379.8 1193.5 1376.0 1129.2 True False 1170.8048255343763 1362.4980920380829 966.1090610631846 1283.6771841617815 1024.4133690036522 1105.9198096770713 890.5582345163654 1352.2788065678396 1143.3413455080504 1289.1191251703708 990.3155585885695 1.1822542980169333 1.3758221611502905 0.9755567835772622 1.29623045203018 1.0344312579150832 1.1167347620522743 0.8992671343926156 1.3655029397853267 1.154522248582642 1.3017256105797894 1.0 9.951744495038605 -14.999999999999998 0.19439716905896928 0.2997363891942314 1.183968684701041 0.0 0.1700357128124671 70.41328378809631 0.8164347332417905 18.80212579129581 0.1275611488108208 1.000000000000004e-15 14.999999999999998 0.8842322955068097 QDHNYCS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 QDHNYCSPTK 10 0 Q5W0Q7-2;Q5W0Q7 Q5W0Q7-2 USPL1 SUMO-specific isopeptidase USPL1 1 QDHNY(0.071)CS(0.644)PT(0.286)K 49.5 0.0089284 5421200.0 1119.6 1390.4 1200.4 920.68 1315.7 1081.5 734.11 1098.7 1139.7 1925.1 1540.8 True False 1308.561108408054 1461.1654211214345 1370.634770279523 1146.246641330896 1122.162272897251 1195.9436121584013 867.4882845262449 1254.444089627633 881.5597697269178 1490.218572959983 1158.1768360833382 1.129845691641768 1.2616082238898225 1.1834417055988307 0.9896991595922543 0.9689040895448405 1.03260881663182 0.7490119448942455 1.0831196502512055 0.7611616311617235 1.2866934707479785 1.0 10.177639832516842 -6.490254286238511 1.1584206273570603 0.8976434594620414 1.2180538863496053 0.14235374509939214 0.15600179961480531 0.3010699691710557 0.75126491529167 0.017652000460731298 0.06747615756635582 3.2340424322014183e-07 6.490254286238511 0.32041042688756394 QDHNYCS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 QDHNYCSPTK 10 0 Q5W0Q7-2;Q5W0Q7 Q5W0Q7-2 USPL1 SUMO-specific isopeptidase USPL1 1 QDHNY(0.063)CS(0.695)PT(0.242)K 50.563 0.008276299999999999 9328900.0 2741.3 3070.9 3343.4 3056.8 3119.0 2904.9 2505.6 3424.9 3299.7 3268.5 3516.4 True False 3019.5947579615995 3329.695520324487 3570.3032294974655 3245.611593503502 2899.9321999658637 2881.243457516527 2600.9519791169278 3356.587682717925 3161.0250840158474 3062.126352194301 3083.90509229618 0.979146461252899 1.0797010351071794 1.157721500060538 1.0524356283243854 0.940344178298517 0.9342840882860123 0.8433955978782536 1.0884212004782268 1.025007251978123 0.9929379343883559 1.0 11.590542651412916 -6.539289483940058 21.114288821810856 0.9949693146935761 1.0782970624564903 0.25589798003109465 0.07099757681882264 45.00061608703627 57898.10127132844 0.010422816571392829 0.021708753457584776 2.8887537087493825e-07 6.539289483940058 0.08332774776291418 QDIAFAYQR ddPTM_A549_MK2206_60min_R1 4 QDIAFAYQR 9 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8 P07355 ANXA2 Annexin A2;Annexin 0 ;;; 90.10799999999999 0.0020120999999999997 46156800.0 7700.499999999999 8827.599999999999 8478.199999999999 8066.6 11839.5 8436.4 7919.5 8510.7 12254.2 11382.8 13071.8 False True 9000.156140850499 9276.88713427184 9680.536245737952 10042.917362123437 10097.925233690818 9329.134248370905 9358.37063833158 9717.117787925634 9478.643265936294 8811.41757430206 9825.711296673273 0.9159801126965449 0.9441440781404548 0.9852249830519167 1.0221058871863764 1.027704247438016 0.9494614656070247 0.9524369641819294 0.9889480256982102 0.9646775668185481 0.8967714711183682 1.0 13.262346134480028 -5.596319894107038 3.115519501388325 0.9847259032352851 0.9194787270534451 0.1881805191031728 0.03562554184179968 0.18467645643549818 3.3980255622184212 0.003616794898350999 0.020028705573251652 2.533261984380908e-06 5.596319894107038 -0.06524717618183995 QDIAFAYQR ddPTM_A549_PD325901_60min_R1 2 QDIAFAYQR 9 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8 P07355 ANXA2 Annexin A2;Annexin 0 ; 130.66 0.00013665 63517000.0 11711.900000000001 12632.5 13451.8 11904.3 15947.6 12652.5 14819.8 13468.8 14650.8 14959.7 14382.5 False True 12900.883466154914 13697.08510876261 14364.720040244654 12639.601574373106 14827.49559223328 12549.462234923007 15383.77559870572 13200.154217930805 14035.077825529404 14015.141988961635 12613.543678179323 1.022780258689132 1.0859030149043483 1.1388330200255112 1.0020658664098385 1.1755218018457383 0.9949196320327353 1.2196236038979857 1.0465064025398574 1.112699030789361 1.1111185204207914 1.0 13.622686026247875 -10.823857819056412 0.9787759923240174 0.9979387308619267 1.0913727151975938 0.0 0.07494596625287497 0.6879265228189204 1.126645194778743 0.04635268751923998 0.010470543359054356 1.5001758882814238e-11 10.823857819056412 0.09343398433566708 QDIMPEVDKQS(ph)GSPESR ddPTM_A549_MK2206_60min_R1 2 QDIMPEVDKQSGSPESR 17 1 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 QDIMPEVDKQS(0.605)GS(0.388)PES(0.007)R;QDIMPEVDKQS(0.577)GS(0.422)PES(0.001)R 53.201 0.0033448 20653100.0 5551.8 5715.9 4646.2 4429.5 7639.1 6185.3 5600.7 5747.7 6836.3 8064.9 7791.4 True False 6488.8081115218265 6006.8148954171465 5305.1010243858 5514.727698847813 6515.398509454581 6839.824340530152 6618.27469336494 6562.454076593019 5287.888965327836 6243.033488683688 5856.580348299402 1.1079516929031814 1.0256522643220234 0.9058359501421785 0.9416293076981597 1.1124919529784103 1.167887049055215 1.1300578664965661 1.1205266019271098 0.902897023663869 1.0659861416392078 1.0 12.515842806885209 -8.7642582972449 24.999677945208546 0.9541458170731584 1.0606550813896831 0.0915233451503088 0.08603524405465575 82.43217195703266 731049.4691195359 0.015732007170484816 0.017114308588172516 1.7208447957423336e-09 8.7642582972449 0.10650926431652474 QDIMPEVDKQSGS(ph)PESR ddPTM_A549_MK2206_60min_R1 2 QDIMPEVDKQSGSPESR 17 1 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 QDIMPEVDKQS(0.043)GS(0.927)PES(0.03)R;QDIMPEVDKQS(0.064)GS(0.895)PES(0.041)R 136.57 5.1498e-13 57348000.0 8800.400000000001 10935.8 10079.2 9211.0 13781.5 11090.2 10417.6 10023.8 14616.4 13855.0 13839.7 True False 10285.692370877325 11492.385509421589 11508.582119794532 11467.695413497504 11754.25960624266 12263.757602921041 12310.343072401422 11444.704346600041 11305.808737594562 10725.1458772846 10402.92053371143 0.9887312257693194 1.104726838216217 1.1062837673805277 1.102353457025418 1.1298999707007389 1.1788764090987172 1.1833545236175598 1.100143398145995 1.0867918005292125 1.0309745078345043 1.0 13.344700989454545 -9.9555138405621 0.806447414716563 1.007714128047805 1.1144629799873764 0.3488532317327885 0.04911342717402243 0.4184131951243141 0.5544414158708855 0.021997258800585215 0.010446277673700233 1.1078632582377797e-10 9.9555138405621 0.1067488519395714 QDIMPEVDKQSGS(ph)PESR ddPTM_A549_PD325901_60min_R1 3 QDIMPEVDKQSGSPESR 17 1 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 QDIMPEVDKQS(0.089)GS(0.91)PESR;QDIMPEVDKQS(0.002)GS(0.997)PES(0.001)R;QDIMPEVDKQS(0.021)GS(0.878)PES(0.102)R 143.31 8.5788e-17 72285000.0 16432.2 18165.7 17641.2 17077.5 20691.2 16106.3 17574.199999999997 19182.800000000003 19337.4 20914.7 18842.0 True False 18100.384847253714 19696.587291529697 18838.4379171534 18132.338389183467 19237.9214927649 15975.13563282675 18242.99579797123 18800.184005384523 18524.716325619924 19594.14227267498 16524.55344927899 1.095363024653685 1.1919588236975391 1.140027049746108 1.0972967254358472 1.1642022007925608 0.9667514273145934 1.1039932700128259 1.137712075735688 1.121041871568893 1.1857592601711078 1.0 14.012323665187688 -14.99999999999914 0.22452366848574468 0.37550732992956515 1.129899826030478 0.0 0.07820106173884675 34.958528423364626 0.4334931861351686 9.63922578776929 0.035386742135337074 1.0000000000019797e-15 14.99999999999914 0.7543924961009129 QDKPLS(ph)PAGSSQEAADTPDTR ddPTM_A549_MK2206_60min_R1 2 QDKPLSPAGSSQEAADTPDTR 21 1 P13994 P13994 CCDC130 Coiled-coil domain-containing protein 130 1 QDKPLS(0.999)PAGS(0.001)SQEAADTPDTR;QDKPLS(0.996)PAGS(0.004)SQEAADTPDTR 232.02 8.156799999999999e-77 65228000.0 6210.7 6047.9 5378.1 5389.0 7014.4 5849.6 6002.3 5475.7 8478.2 8387.4 7399.3 True False 7258.914322963472 6355.71227733049 6140.795449883621 6709.305241921403 5982.59105191949 6468.600789349775 7092.840214970345 6251.897243627951 6557.9012369033635 6492.68051469771 5561.849599708883 1.305125964453159 1.14273357511558 1.1040923239285436 1.2063082831784195 1.0756477579387673 1.1630305123116513 1.2752664536886429 1.1240680157829486 1.1790864027043477 1.1673599579243474 1.0 12.44134901735678 -10.68316750717476 0.6958717375741034 0.985003184730929 1.173158551878766 0.016133150199270307 0.08153303562764964 0.5792532925454777 0.43627600774331027 0.06404554186282403 0.012509686577860111 2.074113378616278e-11 10.68316750717476 0.18815536714783698 QDKPLS(ph)PAGSSQEAADTPDTR ddPTM_A549_PD325901_60min_R1 2 QDKPLSPAGSSQEAADTPDTR 21 1 P13994 P13994 CCDC130 Coiled-coil domain-containing protein 130 1 QDKPLS(0.857)PAGS(0.139)S(0.004)QEAADTPDTR;QDKPLS(0.995)PAGS(0.005)SQEAADTPDTR 234.48 5.504899999999999e-78 62074000.0 15645.1 16446.8 15616.0 16321.7 19099.4 16349.599999999999 15508.8 17647.9 17302.8 17907.4 18352.1 True False 17233.379034686102 17832.829556049623 16675.79566663648 17329.854339729816 17757.924033353003 16216.454278292595 16098.995870740997 17295.898789990286 16575.62348810782 16776.723707903995 16094.90804354701 1.0707348552758924 1.1079795863263353 1.0360913912349048 1.0767290060211272 1.1033255974688685 1.0075518440003959 1.0002539826374235 1.0746192984261749 1.0298675483736948 1.0423621969452848 1.0 13.974316713712186 -2.000000081710054 0.08730160085511754 0.9585515626221378 1.3218890674651025 0.25743044199187326 0.032231613629597394 89.84833692883241 0.5495019734062654 0.304607931751826 3.923173099230443 0.009999998118556657 2.000000081710054 0.3633375048429647 QDKPMDTSVLS(ph)EEGGEPFQK ddPTM_A549_MK2206_60min_R1 4 QDKPMDTSVLSEEGGEPFQK 20 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QDKPMDT(0.002)S(0.002)VLS(0.996)EEGGEPFQK;QDKPMDT(0.005)S(0.003)VLS(0.992)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK 212.38 5.041799999999999e-67 53379000.0 13451.2 16498.8 14074.5 13247.4 19720.4 16251.2 14698.100000000002 15221.500000000002 20715.199999999997 19745.8 20024.0 True False 15721.433709734223 17338.51844792744 16070.475736670387 16493.013594698386 16819.55528345592 17970.891197326506 17368.55451471196 17379.194238888707 16023.240275376906 15285.210065946307 15051.488165714412 1.044510252849673 1.1519471202470613 1.0677001210602626 1.0957729503629818 1.1174679273089398 1.193961088728898 1.1539426748695563 1.1546495633884593 1.0645618625190854 1.0155281589208094 1.0 13.877618515249077 -9.278300251589656 1.391938193809104 1.0181611962845325 1.123134102941578 0.5083562130770678 0.04234315842130369 0.2123539889599232 0.8524533892500766 0.010046075576022618 0.008705243557954902 5.268654844806351e-10 9.278300251589656 0.1049729066570455 QDKPMDTSVLS(ph)EEGGEPFQK ddPTM_A549_PD325901_60min_R1 3 QDKPMDTSVLSEEGGEPFQK 20 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDT(0.002)S(0.005)VLS(0.993)EEGGEPFQK;QDKPMDTS(0.001)VLS(0.999)EEGGEPFQK 189.39 1.5316e-44 69205000.0 24834.1 27288.0 28686.8 24916.8 29847.4 26805.5 28114.3 28113.0 31338.4 29896.0 31028.300000000003 True False 27355.23955010183 29587.655527244337 30633.658755742028 26455.854145841407 27751.021591940083 26587.204895335195 29184.20507123527 27552.264160778144 30021.356030221585 28008.361457916726 27212.015804599465 1.0052632537968083 1.0873011297547215 1.125740150076064 0.9722122144795223 1.0198076390669122 0.977039153815328 1.072474941981419 1.0125036071793392 1.1032389605310782 1.0292644859181164 1.0 14.731956211682071 -14.999916560226666 0.00353735484114333 0.4187138484020745 1.6372847056599016 0.0 0.0499226484640673 442910.2632016313 122.14594143324776 22159.727555187674 19971.54406693985 1.0001921456358507e-15 14.999916560226666 1.218570857257827 QDKPMDTSVLS(ph)EEGGEPFQKK ddPTM_A549_MK2206_60min_R1 1 QDKPMDTSVLSEEGGEPFQKK 21 2 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QDKPMDT(0.002)S(0.008)VLS(0.99)EEGGEPFQKK 61.801 0.00037974 2775700.0 1620.1 1949.8 1557.0 1609.0 2187.4 1460.5 1547.9 1337.2 2574.8 2262.9 2570.0 True False 1893.5332723578856 2049.0364917308493 1777.8060124335364 2003.2050722307545 1865.6363576312583 1615.0491405985633 1829.1333936578626 1526.7521950032506 1991.6119111107034 1751.7093183476945 1931.798071608372 0.9801921330117966 1.06068875512691 0.9202856336601344 1.0369640086465821 0.9657512268236043 0.8360341405941613 0.9468553781788211 0.7903270105928363 1.0309627804175887 0.9067766160928302 1.0 10.915728583641986 QDKPMDTSVLS(ph)EEGGEPFQKK ddPTM_A549_PD325901_60min_R1 1 QDKPMDTSVLSEEGGEPFQKK 21 2 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QDKPMDT(0.021)S(0.021)VLS(0.958)EEGGEPFQKK 55.67 0.0025602 7890100.0 2145.0 2605.8 2217.4 2077.4 2890.4 2285.5 2842.9 2292.9 2541.8 2117.3 2712.1 True False 2362.7588209344603 2825.3999110558943 2367.886098309408 2205.7162798822856 2687.3882753386774 2266.8876457551105 2951.088115194571 2247.166310754749 2434.976985347601 1983.613316659321 2378.5288934184005 0.99336982093109 1.1878770608479996 0.9955254715894174 0.9273447490949962 1.1298531133150909 0.9530629003615592 1.240719893443587 0.9447715001372724 1.023732354938129 0.833966458069168 1.0 11.215853835351673 QDNDT(ph)GNEEQEEEEDDEEEMEEK ddPTM_A549_MK2206_60min_R1 1 QDNDTGNEEQEEEEDDEEEMEEK 23 0 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 QDNDT(1)GNEEQEEEEDDEEEMEEK 44.365 0.010740999999999999 7864400.0 0.0 0.0 0.0 0.0 193.26 0.0 0.0 0.0 186.93 186.65 178.26 True False 0.0 0.0 0.0 0.0 164.8317100099739 0.0 0.0 0.0 144.59065346587073 144.48563536594511 133.9931222742834 0.0 0.0 0.0 0.0 1.2301505272230617 0.0 0.0 0.0 1.0790901130723278 1.0783063556813282 1.0 7.066015140342591 -8.766336304322072 24.999194387127297 1.0373481752512947 0.16402004717885565 0.5697100757866512 0.34768944079741615 63.49132685841529 324127.4434467426 0.06026940180092961 0.06515500544424367 1.7126305853086866e-09 8.766336304322072 -0.8733281280724391 QDNDT(ph)GNEEQEEEEDDEEEMEEK ddPTM_A549_PD325901_60min_R1 2 QDNDTGNEEQEEEEDDEEEMEEK 23 0 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 QDNDT(1)GNEEQEEEEDDEEEMEEK;QDNDT(1)GNEEQEEEEDDEEEMEEK 83.559 8.3402e-06 22454900.0 354.4 381.52 314.39 127.9 420.96 179.3 610.82 442.96000000000004 0.0 187.48 0.0 True False 390.3784271045093 413.6720293445562 335.7263959806508 135.80009251802468 391.3932218331614 177.83984024672557 634.0650893535293 434.1248153046026 0.0 175.64248080446302 0.0 0.0 QDNQNDDS(ph)EEHDDGGYR ddPTM_A549_MK2206_60min_R1 2 QDNQNDDSEEHDDGGYR 17 0 Q9NUP7 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 QDNQNDDS(1)EEHDDGGYR;QDNQNDDS(1)EEHDDGGYR 74.047 0.00016458 10672900.0 323.88 117.29 267.79999999999995 143.63 323.341 300.48 212.238 311.82 159.47 459.26 489.40999999999997 True False 378.54302589424884 123.25956001390462 305.7780668784205 178.8193564477957 275.77796722723264 332.2765941575189 250.7988973468297 356.02143990869985 123.3502996212614 355.5128470300776 367.87598997114895 1.0289962819371181 0.3350573654550583 0.8311987604910052 0.48608596734410364 0.7496492697141252 0.9032299014229714 0.6817484809663682 0.9677756896736348 0.3353040235948404 0.9663931779237863 1.0 8.523075709304093 QDNQNDDS(ph)EEHDDGGYR ddPTM_A549_PD325901_60min_R1 4 QDNQNDDSEEHDDGGYR 17 0 Q9NUP7 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 QDNQNDDS(1)EEHDDGGYR;QDNQNDDS(1)EEHDDGGYR;QDNQNDDS(1)EEHDDGGYR;QDNQNDDS(0.997)EEHDDGGY(0.003)R 117.74 3.8296e-10 19316060.0 499.29999999999995 574.34 599.13 194.15 687.31 317.61 710.28 608.13 1007.46 446.97 557.96 True False 549.9885684347669 622.7416474464054 639.7905646613677 206.14220455335806 639.0357166907787 315.0234894632599 737.3100940801291 596.0003700812438 965.1199597365224 418.74823791962257 489.33445719985673 1.1239522587107278 1.2726298716218583 1.3074709030761364 0.4212705676460554 1.305928301774547 0.6437794944299136 1.5067610368157516 1.2179816101481322 1.9723114641451516 0.85575056438054 1.0 8.934677065599164 -7.796178719297666 24.98494077891157 1.452132291979729 1.0241994532884697 0.07983535463625124 0.38470970790699555 225.20582468402768 161969.87409009243 0.06560319760221733 0.09064597995092719 1.598899919688712e-08 7.796178719297666 -0.4279328386912593 QDNRDLESAQS(ph)LNR ddPTM_A549_MK2206_60min_R1 2 QDNRDLESAQSLNR 14 1 P78504-2;P78504 P78504-2 JAG1 Protein jagged-1 1 QDNRDLES(0.001)AQS(0.999)LNR;QDNRDLES(0.003)AQS(0.997)LNR 126.19 9.106799999999999e-08 20879000.0 1573.85 1539.13 1663.1100000000001 1225.6599999999999 1781.26 1266.13 1434.6399999999999 1272.76 2164.89 2750.3999999999996 2566.3 True False 1839.4774030618219 1617.4651428442405 1898.9640059976477 1525.9467550219676 1519.2390136208535 1400.1110362109273 1695.2955177190493 1453.1776276640264 1674.545871618942 2129.08272976424 1929.0168837231781 0.9535828424225418 0.8384919574795974 0.9844206248379094 0.7910489368432855 0.7875716518813376 0.7258158536739117 0.8788391288970859 0.753325509966124 0.868082537663909 1.1037138905984671 1.0 10.91365005529488 -10.130718025236511 0.856688538839243 0.9905595399667605 0.8391257689356721 0.4519247380247221 0.08319209389043462 0.4347191434470552 0.632868843474953 0.03484340736796106 0.014964549521446548 7.400856351562503e-11 10.130718025236511 -0.15143377103108835 QDNRDLESAQS(ph)LNR ddPTM_A549_PD325901_60min_R1 2 QDNRDLESAQSLNR 14 1 P78504-2;P78504 P78504-2 JAG1 Protein jagged-1 1 QDNRDLESAQS(1)LNR;QDNRDLES(0.059)AQS(0.941)LNR 151.95 6.4322e-14 32723000.0 1647.71 2061.65 1618.45 1898.67 1963.8500000000001 2280.7 1959.2 2915.1000000000004 2051.9 2286.21 2403.8999999999996 True False 1814.9843062200096 2235.3924808613033 1728.2877495304695 2015.9465337075683 1825.9159509147048 2262.126735363674 2033.7584281153763 2856.9560436482893 1965.665778674459 2141.8583104329605 2108.2355395776312 0.8609020539439477 1.060314390349926 0.8197792500342341 0.9562245279820336 0.8660872642724318 1.0729952573595614 0.9646732492342028 1.3551408227472812 0.9323748422665643 1.0159482990510944 1.0 11.041820343666334 -7.255325076451185 24.696724879362254 1.0058539419006263 0.9181244829704106 0.1931437489117338 0.12470478869407088 805.4985756156266 3253542.6453966545 0.018558665621166065 0.031627500594409365 5.554883096246174e-08 7.255325076451185 -0.08772945893021566 QDPQVVS(ph)PFSR ddPTM_A549_MK2206_60min_R1 2 QDPQVVSPFSR 11 0 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 QDPQVVS(0.999)PFS(0.001)R;QDPQVVS(0.939)PFS(0.061)R 76.07300000000001 0.001263 5280400.0 1915.4699999999998 3091.0 2638.3900000000003 2514.91 3917.2 2834.6 2688.6400000000003 2728.96 4026.6000000000004 3956.1 3655.9 True False 2238.754507254712 3248.318697271541 3012.5533751731 3131.063062898598 3340.9850690834605 3134.555490544805 3177.1310856801324 3115.798437089493 3114.581529158909 3062.414262369224 2748.039132293013 0.8146734451290928 1.182049651003727 1.0962556317963972 1.1393808137972121 1.215770557930768 1.140651693678494 1.1561447755036434 1.1338260800127744 1.1333832522828908 1.1143998010733895 1.0 11.424186833055035 -3.964839614337625 15.868008464383143 1.0897240542799616 1.1065792842352942 0.0 0.1053516963062674 0.0 0.0 0.01373760131015694 0.0 0.00010843272839271928 3.964839614337625 0.016855229955332618 QDPRS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 QDPRSPSR 8 1 H7C4Y3;A0A3B3ITD5;Q460N5-4;Q460N5-1;Q460N5 H7C4Y3 PARP14 Poly [ADP-ribose] polymerase 14 1 QDPRS(0.865)PS(0.135)R 41.283 0.025240000000000002 4536800.0 357.89 277.21 314.96 322.33 384.94 350.41 312.62 426.56 391.86 516.45 571.33 True False 394.22272933530684 300.5714595685795 336.3350796083393 342.2395920354568 357.90314237090735 347.55637713806516 324.51692517222807 418.05192617015376 375.391486929857 483.8412588620914 501.0600319592697 0.7867774402077086 0.5998711539479015 0.6712470725178085 0.6830311144499286 0.7142919401721523 0.693642188499915 0.6476607681185146 0.834335008792193 0.7491946333495862 0.9656353091467931 1.0 8.968839652719138 -10.724217523713467 0.33254396397858044 1.120187394306469 0.6692604219640652 0.7907931808251674 0.055981742547753274 0.9221433668653952 0.1284962664881469 0.15439005744940051 0.02173758000548048 1.8870459535759692e-11 10.724217523713467 -0.45092697234240386 QDPVTYISET(ph)DEEDDFMCKK ddPTM_A549_PD325901_60min_R1 1 QDPVTYISETDEEDDFMCKK 20 1 P35251-2;P35251;D6RAD2 P35251-2 RFC1 Replication factor C subunit 1 1 QDPVT(0.001)Y(0.001)IS(0.422)ET(0.577)DEEDDFMCKK 85.46700000000001 2.8771999999999998e-05 3316300.0 1610.4 1830.2 2268.9 1757.2 1975.4 2036.1 2337.8 2001.3 1655.0 2129.7 2401.6 True False 1773.8866224861788 1984.4373770874583 2422.881198004067 1865.7382531092503 1836.654718760042 2019.5186766668025 2426.766258293247 1961.3825015105213 1585.44610541753 1995.230378543124 2106.21842499673 0.8422139895053539 0.9421802380683947 1.1503465971283717 0.8858237260516544 0.8720153128291495 0.9588362976503436 1.1521911637901538 0.9312341389823168 0.7527453404648625 0.9473045885761928 1.0 11.0404393432096 -8.525205657555183 24.940301257247036 0.8810697451565452 0.9751231965060357 0.06943805922604751 0.11064928541592618 128.9138487540721 1381711.197670538 0.02151844191159358 0.02447318389343455 2.983969243503041e-09 8.525205657555183 0.0940534513494905 QDPVVHLS(ph)PNK ddPTM_A549_MK2206_60min_R1 2 QDPVVHLSPNK 11 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 QDPVVHLS(1)PNK;QDPVVHLS(1)PNK 80.507 0.00026693 9216900.0 1624.12 2145.48 1914.6 1698.22 2480.43 2061.51 1893.73 2233.6400000000003 2859.6 2542.6 2838.9 True False 1898.2317500783215 2254.675767913992 2186.1190696244366 2114.283976235992 2115.562032805753 2279.657619880414 2237.7962281618356 2550.265310235613 2211.9051658428493 1968.2248940876075 2133.9227803459185 0.889550347164207 1.0565873276578917 1.0244602521512316 0.9907968534331206 0.9913957769656552 1.0682943360822417 1.0486772289853332 1.1951066522764258 1.0365441459340388 0.9223505706090027 1.0 11.059292255375663 -7.235636654139959 23.30730179726695 1.0382877756378277 0.9961231060377672 0.12007278075415617 0.07159120773862401 683.7149058218992 617591.063744491 0.00971491765473762 0.016822271432367395 5.812505085328881e-08 7.235636654139959 -0.04216466960006049 QDPVVHLS(ph)PNK ddPTM_A549_PD325901_60min_R1 2 QDPVVHLSPNK 11 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 QDPVVHLS(1)PNK;QDPVVHLS(1)PNK 89.46600000000001 9.2778e-05 10319200.0 3131.2 3642.3 4177.799999999999 3167.5 4222.8 3299.2 3930.6 3364.6000000000004 3711.6 4561.2 4192.8 True False 3449.0771189323923 3949.2494036529597 4461.330631152271 3363.149281085559 3926.2050958691398 3272.332409046273 4080.1811339068504 3297.4904135223633 3555.61435943668 4273.205053580739 3677.1121803490582 0.9379852856719157 1.074008409305062 1.2132702001843112 0.9146169918499207 1.0677414512538574 0.889919112757566 1.1096156260099548 0.8967608959945687 0.9669583589095602 1.1621089713871866 1.0 11.844357475226829 -6.296221169868887 24.99466814384736 0.982236607461485 1.0749802211237283 0.07409291399778772 0.10212882046276762 666.7882936209459 479161.854732619 0.010929607280965157 0.02539901940948876 5.055671300811864e-07 6.296221169868887 0.09274361366224326 QDQS(ph)PSLR ddPTM_A549_PD325901_60min_R1 2 QDQSPSLR 8 0 A0A2R8Y6S3;C9J167;P54278;Q68D20;P54278-3 A0A2R8Y6S3 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL 1 QDQS(0.813)PS(0.187)LR;QDQS(0.859)PS(0.141)LR 102.52 0.0022111 22885600.0 3814.5 4085.8 3501.8 3337.5 4248.1 3305.2 3362.8999999999996 3779.3999999999996 3849.8999999999996 3955.7000000000003 3649.2 True False 4201.745231913519 4430.124705116346 3739.4532060340434 3543.6497949875466 3949.7281111494053 3278.2835470355685 3490.8769997494896 3704.016902118054 3688.1020913878874 3705.9364269160164 3200.3715341847374 1.3128929522815143 1.384253252410232 1.1684434654199085 1.107262002906877 1.234146744826475 1.0243446774909146 1.0907724189087802 1.1573709060193897 1.1523981050304506 1.1579706878814202 1.0 11.644023683340865 -2.0000000000000004 0.2353464825025122 1.047617434680607 2.845748260197776 0.5251956869508534 0.07513853578580137 23.012556994681937 0.27416472070063747 0.04056101526014277 16.30645837015216 0.00999999999999999 2.0000000000000004 1.798130825517169 QDQSPS(ph)LR ddPTM_A549_MK2206_60min_R1 1 QDQSPSLR 8 0 A0A2R8Y6S3;C9J167;P54278;Q68D20;P54278-3 A0A2R8Y6S3 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL 1 QDQS(0.3)PS(0.7)LR 103.26 0.0021541 8073200.0 918.44 1309.7 947.02 1161.7 1386.6 1142.9 1041.6 1035.0 1453.6 1377.1 1531.4 True False 1073.450218297869 1376.358135819003 1081.321676233016 1446.316552150694 1182.6329768179125 1263.84091940438 1230.8452373112152 1181.714419554565 1124.3619209222143 1066.0121535625128 1151.1111155101407 0.9325339698610637 1.1956779126479369 0.9393721089677811 1.2564525984181174 1.0273838562438016 1.0979312964450705 1.069267093964025 1.026585881790275 0.9767622827826904 0.9260723306368956 1.0 10.168811386644936 -8.406607832591016 2.5500703805801233 0.9891145668513015 1.0803928018779108 0.19275585802303197 0.09221949487392091 0.33830024847730644 4.29886887991483 0.013585873232886242 0.016552489947457456 3.920957793270254e-09 8.406607832591016 0.09127823502660926 QDRGEFSAS(ph)PMLK ddPTM_A549_MK2206_60min_R1 2 QDRGEFSASPMLK 13 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QDRGEFS(0.301)AS(0.699)PMLK;QDRGEFS(0.04)AS(0.96)PMLK 62.055 0.0020207000000000003 4218600.0 1590.5 1595.4 1851.5 1475.7 1933.0 1330.1 1341.3 1224.5 2569.0 2647.8 2574.7 True False 1858.9375160084062 1676.599045495639 2114.070540796847 1837.2465662466911 1648.6582606296156 1470.8502991510761 1584.9968479315794 1398.0766248739762 1987.1256018500071 2049.6601410230346 1935.3309318949707 0.9605269493565298 0.8663112948099293 1.0923560957747234 0.9493190730164992 0.8518740818219338 0.7599993752545977 0.8189797526667115 0.7223966722347871 1.0267626942252825 1.059074759382944 1.0 10.918364565751165 QDRT(ph)PLTK ddPTM_A549_MK2206_60min_R1 2 QDRTPLTK 8 1 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 QDRT(1)PLTK;QDRT(1)PLTK 80.979 0.0015079000000000002 28159000.0 5521.200000000001 5826.0 4665.8 4521.4 6603.7 5359.0 5110.799999999999 5288.5 7412.0 7698.8 7323.1 True False 6453.04357962 6122.518515142023 5327.480599108794 5629.143202973361 5632.30447786849 5926.085822983705 6039.366204733256 6038.161070351998 5733.193834531823 5959.635732951181 5504.572162721892 1.1723061100590804 1.1122605597951811 0.9678282783151798 1.022630467285921 1.023204767122798 1.0765751901876028 1.0971545155921656 1.0969355822499125 1.041533050172038 1.0826701070995262 1.0 12.42641472080306 -12.080468689176337 0.009986494598557544 2.0527825766336962e-06 2.0091618210298234 0.0 0.05612371140808138 6327.65250141012 8.980146469286337 977.6431960817799 833.6768625345634 8.308666185659398e-13 12.080468689176337 2.0091597682472466 QDRT(ph)PLTK ddPTM_A549_PD325901_60min_R1 2 QDRTPLTK 8 1 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 QDRT(1)PLTK;QDRT(0.995)PLT(0.005)K 76.655 0.0018265999999999998 38512000.0 10583.599999999999 10277.099999999999 10210.3 8057.6 12029.900000000001 8055.5 9885.9 10027.2 10519.2 11286.8 11351.1 True False 11658.039280765475 11143.187284485579 10903.232357521667 8555.299651862675 11184.961324902006 7989.898678792513 10262.113334272046 9827.199629813775 10077.114605503375 10574.149521782663 9954.986660551467 1.1710753292078913 1.1193573295926738 1.0952533367752069 0.8593984043961286 1.123553622550249 0.8026026504338786 1.0308515404583742 0.9871635156233737 1.0122680169362621 1.0621962522245003 1.0 13.281203667431658 -6.019375501172155 21.003898595365456 0.9919026717203928 1.1357389398552007 0.3684016185018547 0.08485380197207622 65.84688805213769 71383.4481585609 0.010066178565081718 0.02722712336398077 9.563668165845438e-07 6.019375501172155 0.14383626813480788 QDS(ph)DEDDGPQRVEEVDQGR ddPTM_A549_MK2206_60min_R1 1 QDSDEDDGPQRVEEVDQGR 19 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 QDS(1)DEDDGPQRVEEVDQGR 60.765 0.00079337 1954000.0 130.11 169.66 236.42 222.83 101.45 304.42 217.48 195.79 299.28 256.59 278.09 True False 152.06938711590925 178.2949693235489 269.9479110208971 277.4233600032189 86.52683939000237 336.63352234235845 256.9933008932825 223.5438320817278 231.49355785195408 198.62614079050562 209.0325781064482 0.7274913245267879 0.8529530226276671 1.291415498322124 1.3271776223414478 0.4139394929432447 1.6104356813268144 1.229441378091843 1.069421016124529 1.1074520534022587 0.9502161940009026 1.0 7.707583996243013 -5.576264988313269 7.3326161576039945 1.0900445799335734 0.7577019704725884 0.16396010147900875 0.2818036282814096 0.2404585823823262 27.140589421997607 0.035161147371867395 0.1391515657082177 2.6529863268285316e-06 5.576264988313269 -0.33234260946098504 QDS(ph)DEDDGPQRVEEVDQGR ddPTM_A549_PD325901_60min_R1 2 QDSDEDDGPQRVEEVDQGR 19 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 QDS(1)DEDDGPQRVEEVDQGR;QDS(1)DEDDGPQRVEEVDQGR 42.611999999999995 0.019776 3589500.0 0.0 276.5 225.34 280.65 379.65999999999997 145.55 360.99 314.92 368.99 91.23700000000001 146.36 True False 0.0 299.8016253768345 240.63292747949947 297.9851130976047 352.99399135589636 144.3646890569487 374.72767199130755 308.6386735500392 353.4826334972897 85.47628024939617 128.35864785248228 0.0 2.3356558392651903 1.8746919783390814 2.3215039896654854 2.750060064216156 1.1246978016071154 2.9193800204406006 2.404502374508852 2.753866914393909 0.6659175807743847 1.0 7.004036687040637 -5.255927741665585 24.99999969051032 2.0180612077593643 0.00013503759123084292 0.38423556621121846 0.7333164283724236 498.59817089870904 2261501.143673891 0.10267717024263646 1.2381205993341016 5.54717999795682e-06 5.255927741665585 -2.0179261701681335 QDS(ph)DSDVVDIEEAEHDFMGEAHPVVFSR ddPTM_A549_PD325901_60min_R1 5 QDSDSDVVDIEEAEHDFMGEAHPVVFSR 28 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 QDS(0.867)DS(0.133)DVVDIEEAEHDFMGEAHPVVFSR;QDS(0.7)DS(0.3)DVVDIEEAEHDFMGEAHPVVFSR;QDS(0.759)DS(0.241)DVVDIEEAEHDFMGEAHPVVFSR;QDS(0.714)DS(0.286)DVVDIEEAEHDFMGEAHPVVFSR;QDS(0.856)DS(0.144)DVVDIEEAEHDFMGEAHPVVFSR 287.3 3.405599999999999e-168 46256900.0 3022.55 3793.4700000000003 3750.1499999999996 3481.45 4479.04 3637.3900000000003 3893.5800000000004 4310.16 3744.4 4358.3 3620.5699999999997 True False 3329.397050916295 4113.159030084122 4004.6577304839107 3696.4912595533774 4164.447682249151 3607.7683018128105 4041.7523175487295 4224.190477544891 3587.0358895017544 4083.116194207868 3175.262842684216 1.0485421887473672 1.2953759212598137 1.2612051124241934 1.1641528411010345 1.3115284902615258 1.1362109156176106 1.272887479806876 1.3303435610936578 1.129681562509466 1.2859143940210618 1.0 11.632660305252966 -9.463330117455156 1.1199851513090953 1.02845216760852 1.228297874008945 0.0 0.1141397540289782 0.23810531575693425 0.6220971629939659 0.02112921899268525 0.01609076026975785 3.4408828173339584e-10 9.463330117455156 0.19984570640042487 QDS(ph)EDEEER ddPTM_A549_PD325901_60min_R1 2 QDSEDEEER 9 0 A0A3B3ISZ4;Q9BYE7-3;Q9BYE7 A0A3B3ISZ4 PCGF6 Polycomb group RING finger protein 6 1 QDS(1)EDEEER;QDS(1)EDEEER 160.56 8.267e-06 24706000.0 3044.1 3583.9 3640.8 2234.44 3697.0 1702.54 2480.21 2773.0 3193.3999999999996 3591.3999999999996 2849.3 True False 3353.1347910520226 3885.927830698144 3887.886581908945 2372.4562840185686 3437.3354739576166 1688.6750787153383 2574.5957487729875 2717.6903396235825 3059.1925033476373 3364.638391087841 2498.8541632008587 1.3418689415459484 1.5550838812139962 1.5558677409684574 0.9494176646866085 1.375564658625227 0.6757797648151914 1.0303105265955612 1.0875746090529788 1.2242381121709895 1.3464724915270656 1.0 11.287050990742026 -6.255657880063902 24.976134348302118 1.0814545927926553 1.4913545801229655 0.46405054114170385 0.1904505568601505 279.8964709488268 1209150.7476999485 0.023968312893083085 0.061611261608924564 5.5506279719265e-07 6.255657880063902 0.4098999873303102 QDS(ph)ESPKSTSPSAAGGQQK ddPTM_A549_MK2206_60min_R1 2 QDSESPKSTSPSAAGGQQK 19 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 QDS(0.565)ES(0.419)PKS(0.007)T(0.007)S(0.001)PSAAGGQQK;QDS(0.533)ES(0.441)PKS(0.017)T(0.007)S(0.002)PSAAGGQQK 51.833999999999996 0.0039023000000000005 2978700.0 635.09 782.77 646.13 615.09 899.0 615.02 318.2 805.86 937.76 798.36 1191.5 True False 742.2776655402566 822.6096495190054 737.7609497839951 765.7870776124396 766.758290898099 680.1010081827644 376.01282115248534 920.0931228427459 725.358857295003 618.0099215148995 895.6176662729083 0.8287885483872014 0.9184830542057929 0.823745419018106 0.8550379324240491 0.856122338552058 0.7593653338851484 0.4198363155533251 1.0273280189656058 0.8098978890329025 0.6900376631545614 1.0 9.806739175751016 -10.532443854598425 0.7102873306301222 1.0078111555136227 0.8078563895865776 0.0 0.16756709043234214 1.0236832572718986 0.8701429566601313 0.11679633761277515 0.028081526780786525 2.9346488695617565e-11 10.532443854598425 -0.19995476592704509 QDS(ph)KT(ph)LPATCTSLR ddPTM_A549_PD325901_60min_R1 1 QDSKTLPATCTSLR 14 1 Q9C0F0 Q9C0F0 ASXL3 Putative Polycomb group protein ASXL3 2 QDS(0.672)KT(0.705)LPAT(0.213)CT(0.216)S(0.194)LR 79.633 0.0011853 17486000.0 1337.1 860.7 1135.4 1284.8 1283.9 1259.5 786.8 1149.6 1301.5 1187.0 1469.7 True False 1472.8414076790052 933.2342096269126 1212.4550717148477 1364.1591780074914 1193.7232932145473 1249.2430495858946 816.7421045534807 1126.6703261562466 1246.802481088167 1112.052617425312 1288.9362171959096 1.1426798223446484 0.7240344379935033 0.9406633590857992 1.0583604989975608 0.9261306163089289 0.9692047076647688 0.6336559510526512 0.8741086728149561 0.9673112326695227 0.8627677635163289 1.0 10.33196515859292 -8.903068346795518 4.902870747243765 0.9859504867478897 0.902154400452932 0.0 0.1377924879090178 0.42921299397225804 16.801160083858687 0.02273125767164792 0.023950880768117067 1.250062287043943e-09 8.903068346795518 -0.0837960862949576 QDS(ph)LASAK ddPTM_A549_MK2206_60min_R1 1 QDSLASAK 8 0 Q8WV41 Q8WV41 SNX33 Sorting nexin-33 1 QDS(0.976)LAS(0.024)AK 80.245 0.0039445 26771000.0 7492.4 9638.7 6969.5 5997.9 10664.0 8207.8 5937.8 8348.4 9971.5 9465.6 9748.7 True False 8756.933948407024 10129.268659783638 7957.879899586076 7467.385769255965 9095.339726515376 9076.34394810331 7016.621399871863 9531.811265902728 7712.971171213445 7327.314385855297 7327.82873956752 1.1950243734713495 1.382301500182366 1.0859806065903965 1.019044799578201 1.2412052805497436 1.238613001296614 0.9575307569600727 1.3007688368089898 1.052558874577172 0.9999298081695815 1.0 12.839170070921199 -2.000000000006379 0.06733586677808645 0.7878985683925259 1.9585236036056994 0.26243410314985594 0.11719896823691976 191.7600513085197 0.9299164962687738 2.892660085349767 21.391697817021548 0.009999999999853121 2.000000000006379 1.1706250352131735 QDS(ph)LDIYNER ddPTM_A549_MK2206_60min_R1 2 QDSLDIYNER 10 0 Q9ULQ0-2;Q9ULQ0 Q9ULQ0-2 STRIP2 Striatin-interacting protein 2 1 QDS(1)LDIYNER;QDS(1)LDIYNER 132.86 9.454399999999999e-07 7079400.0 1120.6200000000001 2963.78 1743.2600000000002 991.48 2914.7799999999997 1929.8 965.73 2284.86 2557.94 2107.41 2378.8500000000004 True False 1309.7532594714496 3114.623742672098 1990.4804812041662 1234.392644509228 2486.019723185717 2134.010155102435 1141.1906403884022 2608.7459020902825 1978.570674190817 1631.3446173401906 1788.1158920799899 0.732476717685175 1.7418466870450298 1.113171964983086 0.6903314544525107 1.3903012294655601 1.193440629074713 0.6382084323745566 1.458935583339462 1.1065114308051278 0.9123259988716736 1.0 10.804224528739663 -14.999999739620652 0.15941550603160584 0.5034157758048321 1.1644852386158493 0.02757253623613609 0.32489337672507335 218.67173726969204 2.2510527907858155 33.860899359411796 0.4925532313986894 1.0000005995457857e-15 14.999999739620652 0.6610694628110172 QDS(ph)LDIYNER ddPTM_A549_PD325901_60min_R1 2 QDSLDIYNER 10 0 Q9ULQ0-2;Q9ULQ0 Q9ULQ0-2 STRIP2 Striatin-interacting protein 2 1 QDS(1)LDIYNER;QDS(1)LDIYNER 137.84 3.6863e-07 12664900.0 1390.8 2145.66 1909.22 1362.83 2092.96 1029.34 1135.08 1425.4299999999998 1178.44 1474.2 1474.17 True False 1531.9929921471548 2326.482298394424 2038.7911502725221 1447.008913888504 1945.9577099200233 1020.9573963165898 1178.276090539609 1396.9986804217976 1128.914264935489 1381.1187604114543 1292.8564355335734 1.1849676035490264 1.7994900550843174 1.5769663933575848 1.1192340263915772 1.505161483082156 0.7896912358217342 0.9113742703019643 1.080552056690845 0.8731938318190573 1.0682692389131778 1.0 10.336346365500061 -7.255130485630424 24.94217665087576 0.9386305816635071 1.4473971948468436 0.6204351428780623 0.18794984357652017 231.40040923037986 914839.5462360509 0.026304640521061927 0.04484855617633822 5.557372585529999e-08 7.255130485630424 0.5087666131833365 QDS(ph)LSSEVDTLK ddPTM_A549_MK2206_60min_R1 2 QDSLSSEVDTLK 12 0 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 1 QDS(0.997)LS(0.003)SEVDTLK;QDS(1)LSSEVDTLK 137.46 2.2235999999999998e-08 11626400.0 2911.3 3484.3 2909.7 2835.4 4513.6 3047.4 3206.6 3409.6000000000004 5326.9 4409.7 4576.6 True False 3402.656265548739 3661.6359873514166 3322.3392128309956 3530.0731272859443 3849.655419129766 3369.873845299597 3789.197713097297 3892.921241462073 4120.365655311327 3413.54570733034 3440.1039122657085 0.9891143850092872 1.0643969137954916 0.9657671098204847 1.0261530515690094 1.1190520743875787 0.9795848995387303 1.1014776907136126 1.1316289684104721 1.1977445334195114 0.9922798247923049 1.0 11.748236428498252 -7.78893034781919 24.06614924074392 1.099780720163444 1.0276170238417799 0.15096913793840805 0.06705286974457907 202.92771899151805 177646.12144284943 0.012521552588145805 0.017303662649264157 1.6258094822860777e-08 7.78893034781919 -0.07216369632166408 QDS(ph)LSSEVDTLK ddPTM_A549_PD325901_60min_R1 2 QDSLSSEVDTLK 12 0 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 1 QDS(0.841)LS(0.146)S(0.013)EVDTLK;QDS(0.709)LS(0.249)S(0.042)EVDTLK 160.78 5.3792999999999994e-14 15796200.0 7174.1 7832.099999999999 6721.7 6193.3 8499.5 7381.1 7369.7 8295.6 8965.9 8788.0 8540.7 True False 7902.409350706718 8492.138553757337 7177.874982865678 6575.846074995168 7902.524441683188 7320.990768795908 7650.157966354584 8130.137750227696 8589.09440275712 8233.124180230536 7490.248043958019 1.0550263895574417 1.1337593233120618 0.9582960324866258 0.8779210029365517 1.055041755000054 0.9774029812939717 1.0213490823612386 1.0854297084040951 1.146703600782017 1.099179110212746 1.0 12.870797779829806 -8.162277774696497 5.055184123054709 1.0723481783818056 1.0084048946899902 0.1950126389961342 0.06892918806533439 0.38526964272992964 15.58927612652979 0.01307701449575124 0.016963811696792813 6.8821197525103394e-09 8.162277774696497 -0.06394328369181546 QDS(ph)LVINLNR ddPTM_A549_MK2206_60min_R1 1 QDSLVINLNR 10 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 QDS(1)LVINLNR 76.52199999999999 0.0014671 783910.0 490.6 565.02 462.14 309.18 822.0 568.71 326.66 631.42 659.95 440.68 512.94 True False 573.401285981593 593.7771046044536 527.6784011471 384.9291138796176 701.0848888968158 628.8905147208545 386.00989364447173 720.9257186426508 510.47237872359347 341.13008193444796 385.56284157618614 1.4871798424285927 1.5400267883105248 1.3685924685842221 0.9983563569197232 1.81834143049359 1.631097312567626 1.0011594791304526 1.8698008233767982 1.3239667407698714 0.8847587089562458 1.0 8.59082220903732 -9.929411294452695 0.8368479316038407 1.0299596385991647 1.4517731512677745 0.32881937416634466 0.271526528098769 0.5100307127983776 0.7306185786687488 0.10559041834496583 0.052524902067189815 1.1764912609218558e-10 9.929411294452695 0.4218135126686098 QDS(ph)LVINLNR ddPTM_A549_PD325901_60min_R1 2 QDSLVINLNR 10 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 QDS(1)LVINLNR;QDS(1)LVINLNR 75.73899999999999 0.0015227 4394000.0 2127.43 2186.2 2434.6000000000004 2051.43 2481.0 1922.6599999999999 2592.9 2102.69 2250.6000000000004 2206.0 2430.6000000000004 True False 2343.405127468809 2370.438746469568 2599.826596439111 2178.1421719644372 2306.7431189853523 1907.0024944158906 2691.5742283893223 2060.750198421606 2156.0151086723235 2066.7127835216843 2131.6516088428766 1.0993377706504668 1.112019776888547 1.219630161727213 1.0218096441879623 1.0821388961573888 0.8946126498837528 1.262670793493496 0.9667387437388242 1.011429400436909 0.9695359105344409 1.0 11.057755951996505 -6.7447846279672685 0.36876455463125885 0.998831794219862 1.1651496006348352 0.19987931247741364 0.0945553360556227 2.7481041682585574 0.5257634800794604 0.030155358521303896 0.1755595481045387 1.799763218813149e-07 6.7447846279672685 0.16631780641497318 QDS(ph)MEALQMDR ddPTM_A549_MK2206_60min_R1 2 QDSMEALQMDR 11 0 Q8TDR0-2;Q8TDR0 Q8TDR0-2 TRAF3IP1 TRAF3-interacting protein 1 1 QDS(1)MEALQMDR;QDS(1)MEALQMDR 43.761 0.022569 5777600.0 1237.5700000000002 1438.03 1249.6999999999998 1226.4099999999999 1768.0900000000001 1477.6 1371.17 1464.9099999999999 1876.53 1609.49 1960.1599999999999 True False 1446.441560318467 1511.2195846772554 1426.9262515980656 1526.880505055637 1508.0063031746606 1633.9586512485007 1620.2938402880377 1672.565478598721 1451.4989512026439 1245.9050911606487 1473.398174336135 0.9817044608258635 1.025669510794773 0.968459359087364 1.0362986269774628 1.023488646478145 1.1089729033936864 1.0996985529848977 1.135175479196127 0.9851369280110869 0.8455997250858632 1.0 10.524931644780343 -3.5862317224514983 16.390311180969068 1.018654776265992 0.40887101527071834 0.0 0.07627153263696537 0.0 0.0 0.008105082609921295 0.0 0.00025927955792585136 3.5862317224514983 -0.6097837609952738 QDS(ph)PFSR ddPTM_A549_MK2206_60min_R1 1 QDSPFSR 7 0 Q92667;Q92667-2;I3L2A2;I3L2N7 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 QDS(0.88)PFS(0.12)R 60.102 0.029036000000000003 4372300.0 782.02 830.46 747.39 550.0 990.85 835.31 883.39 700.62 1053.9 1264.1 884.44 True False 914.0058574466481 872.7268668185454 853.381140419204 684.7500246904381 845.0972775710584 923.7019497660974 1043.890528214626 799.9350305587625 815.1933327324723 978.5389320444218 664.8091386977858 1.374839490379124 1.3127479994153277 1.2836483296405778 1.0299949035473732 1.2711878167415347 1.389424266302093 1.570210858201163 1.2032551660250317 1.2262065685938914 1.4719095678515541 1.0 9.376796403807406 -9.961553843674567 0.7255230073980042 1.013787057910063 1.301696928075484 0.0 0.18455307530670914 0.470461598792894 0.5023836870419646 0.0657025604144373 0.02871491868821544 1.0925621633253827e-10 9.961553843674567 0.287909870165421 QDS(ph)PFSR ddPTM_A549_PD325901_60min_R1 2 QDSPFSR 7 0 Q92667;Q92667-2;I3L2A2;I3L2N7 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 QDS(0.987)PFS(0.013)R;QDS(0.929)PFS(0.071)R 90.10799999999999 0.012572 8095300.0 1672.76 1951.05 1685.96 1539.9299999999998 2581.8999999999996 1509.88 1617.78 2143.3 2110.94 2101.2 1785.5 True False 1842.5773637791729 2115.47183071057 1800.3793841010788 1635.0479786652218 2400.5562510714526 1497.5840378791193 1679.3455031831834 2100.5502001136774 2022.22453279159 1968.5298734069652 1565.894819217049 1.1766929305637948 1.3509667474143063 1.149744773407752 1.0441620718068085 1.5330252208585353 0.9563758813813017 1.072451024534879 1.3414376076446548 1.2914178576838942 1.257127777197216 1.0 10.612771595062341 -10.894083663961823 1.1446606640739379 0.9999754481432938 1.2176749404941807 0.0 0.17179152998926478 0.6072202199749599 1.4128904594396259 0.10430209278086407 0.024960536344605128 1.2761929349941535e-11 10.894083663961823 0.21769949235088693 QDS(ph)RGSPLLGPVVPGPSPIPSVTEK ddPTM_A549_MK2206_60min_R1 2 QDSRGSPLLGPVVPGPSPIPSVTEK 25 1 P49454 P49454 CENPF Centromere protein F 1 QDS(0.509)RGS(0.491)PLLGPVVPGPSPIPSVTEK;QDS(0.5)RGS(0.5)PLLGPVVPGPSPIPSVTEK 81.697 7.9031e-07 13071500.0 859.13 1278.4499999999998 1308.4099999999999 1105.9 1863.8600000000001 1467.26 1289.9 1269.63 1640.98 1915.87 1850.5700000000002 True False 1004.1301402881493 1343.517644298545 1493.9622124137195 1376.8455496457368 1589.6886630404124 1622.5244793116383 1524.2581332639566 1449.6039405788047 1269.3006501065884 1483.0736363704978 1391.0223958662664 0.7218648263839218 0.9658490390169905 1.0740029900692913 0.9898083264060599 1.1428203224941074 1.1664258491691666 1.0957825968824297 1.0421140197933738 0.9124947620387699 1.0661752397213604 1.0 10.44192993254015 -5.276909162297278 3.8167000211016684 1.0069224371357088 0.6975215740503877 0.5373869077962905 0.08003868881392663 0.17639565773191646 4.979841352684241 0.013263861489195956 0.14872825867079398 5.285557937581e-06 5.276909162297278 -0.3094008630853211 QDS(ph)RGSPLLGPVVPGPSPIPSVTEK ddPTM_A549_PD325901_60min_R1 2 QDSRGSPLLGPVVPGPSPIPSVTEK 25 1 P49454 P49454 CENPF Centromere protein F 1 QDS(0.5)RGS(0.5)PLLGPVVPGPSPIPSVTEK;QDS(0.545)RGS(0.449)PLLGPVVPGPS(0.006)PIPSVTEK 77.31 1.4636e-06 17953500.0 2816.8 2669.5 2417.07 2409.8500000000004 3086.9 2258.9 2925.0 2993.8 3029.3 2728.1 2984.0 True False 3102.7594623814375 2894.4681336110652 2581.1069052226585 2558.700961333557 2870.0867932268757 2240.504267335909 3036.3124756214174 2934.086310409333 2901.989055674519 2555.8473004195403 2616.986917134511 1.1856228405523812 1.1060308000241685 0.9862895715385771 0.9777278382939819 1.0967142305661575 0.8561388873082963 1.160232195178893 1.1211696517084742 1.1089046860242135 0.9766374007012936 1.0 11.353690996731512 -11.073276960635821 1.4330476093983007 1.0004780331715635 1.0676654484850678 0.09619260440463584 0.09023059195950486 0.9861539344590222 3.6569342937430345 0.06204499131784695 0.01412197810574107 8.447399611923852e-12 11.073276960635821 0.06718741531350436 QDS(ph)SSEVGENGR ddPTM_A549_MK2206_60min_R1 2 QDSSSEVGENGR 12 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 QDS(0.887)S(0.056)S(0.056)EVGENGR;QDS(0.782)S(0.109)S(0.109)EVGENGR 52.555 0.024587 2507810.0 359.68 550.69 598.38 297.68 441.21 358.81 240.82 340.59000000000003 637.86 411.48 592.9000000000001 True False 420.3851906682825 578.7177688128328 683.2392817726261 370.61161336336306 376.30859346735303 396.77903604119854 284.5738767754292 388.86967551312983 493.38572845311234 318.52638221472876 445.6665667924528 0.9432728905241308 1.298544274877909 1.533072778355418 0.8315894459634373 0.8443725006695425 0.8903046932528345 0.6385353939012335 0.8725574330421485 1.1070736851635594 0.7147190432237801 1.0 8.799820926063186 -6.278306352000079 24.950636415400083 0.9715209791408327 1.2623214485586627 0.367477732984438 0.19645959646160602 718.2322300377867 1062451.1125196756 0.02798986708790168 0.0652044840683873 5.268580838037825e-07 6.278306352000079 0.29080046941783 QDS(ph)WEVVEGLR ddPTM_A549_MK2206_60min_R1 1 QDSWEVVEGLR 11 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4;C9J8P4;C9JEF2;C9JZ19 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 QDS(1)WEVVEGLR 64.22399999999999 0.0063181999999999995 1136100.0 749.89 620.36 296.2 324.42 1224.5 695.09 407.94 572.37 1052.8 927.41 1062.4 True False 876.4530989497289 651.9336742282022 338.2056139260201 403.9029145637674 1044.377672085342 768.6439624366006 482.05741753911036 653.5052003096097 814.3424809761339 717.9074368857815 798.5767592516473 1.097518915740874 0.8163694556289548 0.423510464094842 0.5057784488272211 1.30779873066183 0.9625173203849596 0.6036456883504226 0.8183373642403701 1.0197422746678237 0.8989836337818525 1.0 9.641287276020307 -8.750238134248471 8.748181527187755 1.0093765067404008 0.8073769167922805 0.06915632395882387 0.24328537996015798 0.25034930130595917 138.17156091752102 0.042197546622649476 0.04694144930721808 1.7773046033801004e-09 8.750238134248471 -0.20199958994812028 QDS(ph)WEVVEGLR ddPTM_A549_PD325901_60min_R1 1 QDSWEVVEGLR 11 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4;C9J8P4;C9JEF2;C9JZ19 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 QDS(1)WEVVEGLR 57.034 0.014021 2139600.0 895.78 1094.4 1009.9 1042.9 1175.5 1136.5 1032.7 1142.3 957.46 1668.0 1332.1 True False 986.7189261616178 1186.6289287971342 1078.4378870220396 1107.317564402251 1092.9369352548495 1127.2447208053745 1071.9999636151229 1119.5159303829862 917.2212858568391 1562.6821953373383 1168.2601448776422 0.8446054849067558 1.0157231965842812 0.9231145064312622 0.9478347517523386 0.9355253109052336 0.9648918742524051 0.9176038130851402 0.9582762326452887 0.785117330141314 1.3376149158122703 1.0 10.190145849920539 QDSDS(ph)DVVDIEEAEHDFMGEAHPVVFSR ddPTM_A549_PD325901_60min_R1 1 QDSDSDVVDIEEAEHDFMGEAHPVVFSR 28 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 QDS(0.378)DS(0.622)DVVDIEEAEHDFMGEAHPVVFSR 288.85 3.034499999999999e-184 17575000.0 868.7 804.09 837.64 1014.1 616.64 813.89 655.74 979.78 818.48 1103.8 794.76 True False 956.8897844968602 871.8534862541001 894.4872875385108 1076.738653811797 573.3293336925137 807.261949684369 680.6945445346961 960.237519277459 784.0821319408707 1034.1058796243142 697.0095583987352 1.3728503045139828 1.250848680263496 1.2833214075190709 1.5447975437889645 0.8225559130202512 1.1581791669240815 0.9765928405608667 1.37765330146038 1.12492306955183 1.483632279017812 1.0 9.445034630315913 -2.0000000000082987 0.13968118359870982 0.9748860786044782 2.327620036047347 0.0 0.22335545886801839 68.51161025932493 0.610153994615007 0.37721926999582084 18.643405652477956 0.009999999999808915 2.0000000000082987 1.3527339574428687 QDSES(ph)PKS(ph)TSPSAAGGQQK ddPTM_A549_MK2206_60min_R1 1 QDSESPKSTSPSAAGGQQK 19 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 2 QDS(0.091)ES(0.904)PKS(0.831)T(0.092)S(0.074)PS(0.009)AAGGQQK 68.375 0.00042136 3627400.0 1205.1 990.11 1238.4 814.05 1304.7 1419.2 1023.1 1229.5 1516.5 1457.8 1793.8 True False 1408.4914181337494 1040.502369898261 1414.0237416812402 1013.492286544093 1112.7803583256386 1569.3788020112843 1208.984026779094 1403.7853901858327 1173.0151713528749 1128.4819675139283 1348.3499536385589 1.0446037501858454 0.7716856941259479 1.0487067825867156 0.751653740788255 0.8252904635942403 1.163925431803719 0.8966396472344719 1.0411135376225436 0.8699634454597351 0.8369355184599437 1.0 10.3969792699466 QDTRS(ph)PTSAPTQR ddPTM_A549_MK2206_60min_R1 2 QDTRSPTSAPTQR 13 1 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;H0YID7 F8VV64 TNS2 Tensin-2 1 QDT(0.158)RS(0.838)PT(0.003)S(0.001)APTQR;QDT(0.201)RS(0.785)PT(0.011)S(0.003)APTQR 88.551 5.3161e-05 41950000.0 1711.15 1807.23 1761.4699999999998 2253.8 2113.16 1447.32 1725.46 1650.46 2676.9 3120.4 2642.16 True False 1999.9502863991088 1899.210287696555 2011.2729330258824 2805.9811011769284 1802.316963286125 1600.474441746739 2038.953747283996 1884.4177593217657 2070.5864241309014 2415.499472788081 1986.0387520936881 1.007004664078561 0.9562805789637295 1.0127057847716174 1.4128531471094683 0.9074933514696614 0.8058626449557009 1.0266434857499758 0.9488323212904113 1.0425710082182853 1.2162398494196824 1.0 10.955678058035899 -5.973596161995894 22.435045321196984 1.0204434792282044 0.9823550878161205 0.007439667388721594 0.15329290890753514 384.83867803813087 326977.0660948048 0.01913192200184066 0.05947857297303551 1.0626832566446997e-06 5.973596161995894 -0.03808839141208398 QDTRS(ph)PTSAPTQR ddPTM_A549_PD325901_60min_R1 1 QDTRSPTSAPTQR 13 1 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;H0YID7 F8VV64 TNS2 Tensin-2 1 QDT(0.166)RS(0.83)PT(0.004)S(0.001)APTQR 70.335 0.00079034 27800000.0 1311.0 1247.2 1330.5 1102.6 1250.0 1269.7 1152.3 1423.0 1403.3 1422.2 1114.9 True False 1444.09175489281 1352.30592104878 1420.7957309464541 1170.7050978137145 1162.2043122658959 1259.3599841676935 1196.151407062754 1394.6171486780956 1344.3241811072025 1332.4020492858297 977.7743679334006 1.4769171725630383 1.383044969676368 1.4530916104391367 1.1973162073046437 1.1886221917662882 1.28798629363689 1.2233409325209759 1.4263179670231318 1.3748817980865384 1.362688666202164 1.0 9.9333577757916 -10.739477596586843 0.8621027745996179 0.9875552039206998 1.3312555833211368 0.0 0.14300422270705435 0.37079146907629357 0.46123278693038544 0.08439163864004087 0.01885072034279363 1.821891054311891e-11 10.739477596586843 0.34370037940043696 QDTVSEPVT(ph)PASLAALQSDVQPVGHDYVEEVR ddPTM_A549_PD325901_60min_R1 2 QDTVSEPVTPASLAALQSDVQPVGHDYVEEVR 32 0 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 QDT(0.001)VS(0.01)EPVT(0.986)PAS(0.003)LAALQSDVQPVGHDYVEEVR;QDT(0.004)VS(0.05)EPVT(0.923)PAS(0.022)LAALQS(0.001)DVQPVGHDYVEEVR 115.41 5.0043e-21 6784400.0 1482.29 1092.62 1072.85 1293.96 1266.0700000000002 1288.33 1740.45 1608.71 1226.35 1210.88 1571.5 True False 1632.7709895957767 1184.698921950223 1145.6600525711415 1373.8849704036227 1177.145610904387 1277.83826762445 1806.6837771607845 1576.6230170414185 1174.8107742470017 1134.4248301499267 1378.2154625592789 1.1846993695483583 0.8595890513013799 0.8312633863820587 0.9968578990199293 0.854108550428309 0.9271687209571475 1.310886306416749 1.1439597507589319 0.8524144490916068 0.8231113791477532 1.0 10.428585733275026 -5.244549624488813 23.089114410702987 0.9559250922529586 1.184699896194815 0.1663542388297905 0.14439253677813024 1606.2726954859863 2195749.1761768367 0.0199990972732299 0.6922215253771891 5.694431532115631e-06 5.244549624488813 0.22877480394185634 QDTVSEPVT(ph)PASLAALQSDVQPVGHDYVEEVRNDEGK ddPTM_A549_PD325901_60min_R1 1 QDTVSEPVTPASLAALQSDVQPVGHDYVEEVRNDEGK 37 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 QDT(0.008)VS(0.035)EPVT(0.906)PAS(0.051)LAALQSDVQPVGHDYVEEVRNDEGK 117.29 6.1806999999999996e-21 6882700.0 982.02 816.93 918.28 932.11 1117.0 1061.1 1245.4 790.26 818.9 1188.1 939.86 True False 1081.713947475085 885.7755581160842 980.600002866223 989.6843177245975 1038.5457734408049 1052.4587534065838 1292.7943785090301 774.497644353023 784.4844808014594 1113.0831632375855 824.263178263419 1.3123404951244704 1.074627111188275 1.1896685776164098 1.2006897115187074 1.2599686615006174 1.276847954829104 1.568424275888104 0.9396242180619503 0.951740295440873 1.3503977765725999 1.0 9.686961237564592 -8.347768568749403 24.99999520674126 0.973754500424065 1.2557655689667686 0.2173553663998422 0.16119748410737747 40.62376663966371 11763.38110862587 0.018710437271996876 0.022619816915254765 4.489845856571048e-09 8.347768568749403 0.28201106854270364 QDVDLCLVS(ph)SCEYKHPK ddPTM_A549_MK2206_60min_R1 2 QDVDLCLVSSCEYKHPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QDVDLCLVS(0.5)S(0.5)CEYKHPK;QDVDLCLVS(0.5)S(0.5)CEYKHPK 148.44 6.7508e-17 18206700.0 3354.2 3884.8 3713.4 2784.6 3792.4 3933.1 3161.6 2743.8999999999996 5086.1 3930.6 5253.4 True False 3920.306957683364 4082.5197266776077 4240.015957977323 3466.8271250054445 3234.5429837619017 4349.298031419521 3736.021795586733 3132.856227841323 3934.1064708327435 3042.674730079743 3948.8357935359604 0.9927753805566449 1.0338540116964299 1.0737382306243295 0.8779365124983067 0.8191130634139513 1.1014127349987803 0.9461071543421499 0.7933619911391723 0.9962699581665746 0.7705245011860062 1.0 11.94721166137986 -8.948343535167156 24.99999002434612 0.9983558691642349 0.9548966966323956 0.0 0.11508887091338077 281.2792457635472 136129.7822422562 0.016233904275801122 0.017280654993851948 1.1263061741788086e-09 8.948343535167156 -0.043459172531839285 QDVDLCLVSS(ph)CEYKHPK ddPTM_A549_PD325901_60min_R1 2 QDVDLCLVSSCEYKHPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QDVDLCLVS(0.117)S(0.883)CEYKHPK;QDVDLCLVS(0.11)S(0.89)CEYKHPK 136.58 7.762899999999999e-13 31930000.0 3659.3999999999996 3738.8 4197.4 3455.7 4420.4 3691.6 3763.0 4441.4 2967.6000000000004 4250.6 4479.299999999999 True False 4030.899594092102 4053.8817973197424 4482.260805016646 3669.150740535872 4109.926353552133 3661.5368335460803 3906.2030241926127 4352.812792789105 2842.8820921069873 3982.2163905880648 3928.3744966221893 1.026098605812167 1.0319489144442493 1.1409963100184863 0.9340124633460454 1.0462155166433473 0.9320742807729891 0.9943560695527779 1.1080442550810439 0.7236789910308801 1.0137058964241243 1.0 11.939716754708243 -8.74671673540404 24.999996430915843 0.869515063836786 1.0240280868921414 0.18963217615224903 0.09430313577934665 221.15162422406777 375529.528525746 0.018744485395420406 0.021210196577611362 1.7917741412554339e-09 8.74671673540404 0.15451302305535541 QDVDNAS(ph)LAR ddPTM_A549_MK2206_60min_R1 2 QDVDNASLAR 10 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 QDVDNAS(1)LAR;QDVDNAS(1)LAR 123.95 2.5121e-05 101407000.0 5627.0 5835.7 5692.700000000001 5356.3 6717.6 5347.0 5164.1 5687.8 7122.4 8104.799999999999 7439.9 True False 6576.700033058343 6132.712203709978 6500.010460488365 6668.593740453445 5729.449938750908 5912.815990948656 6102.35012480688 6494.063068156963 5509.187772135653 6273.92005097194 5592.367499205885 1.1760135638425466 1.0966218161772847 1.1623003068756417 1.192445550368495 1.0245124161751689 1.0573010432143943 1.091192616664304 1.1612368230591281 0.9851262051211686 1.1218719177276593 1.0 12.449243454363444 -8.066197668813878 0.47154645793036293 0.9855240697901578 1.1519929198035903 0.05500521616650922 0.06757309955328863 0.5385020833251073 0.26661492241853096 0.019079414077566716 0.03183672212810374 8.586226310966465e-09 8.066197668813878 0.16646885001343248 QDVDNAS(ph)LAR ddPTM_A549_PD325901_60min_R1 1 QDVDNASLAR 10 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 QDVDNAS(1)LAR 138.24 3.2233000000000005e-07 55657000.0 4747.9 5157.3 5759.1 4219.9 6474.5 5512.6 4934.3 6080.6 5450.2 5721.4 5322.3 True False 5229.903312780757 5591.923770545926 6149.9471582816395 4480.553638911749 6019.753455812434 5467.707213296702 5122.077486652568 5959.3176628615765 5221.147047581041 5360.1498275797685 4667.690840839481 1.1204476669753394 1.198006457844201 1.317556660881074 0.9599079698487324 1.2896641318107918 1.1713944645728376 1.09734720256909 1.2767164463252663 1.1185717361353824 1.1483515104903026 1.0 12.188493293616883 -9.828374942956929 0.7249677794601672 1.0081132714945669 1.1788796759157323 0.06256064028707686 0.10503825569404321 0.5100979816036709 0.5582725990800593 0.040471167469669785 0.01975850505172401 1.4846533311010122e-10 9.828374942956929 0.17076640442116542 QDVDNASLAR ddPTM_A549_MK2206_60min_R1 2 QDVDNASLAR 10 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 133.89 2.2864e-06 29247000.0 5368.1 6500.3 6926.6 5018.1 7175.1 6349.4 6402.5 5271.3 7631.700000000001 8821.2 9550.4 False True 6274.104042555625 6831.137504973864 7908.896034503614 6247.534725271067 6119.652294797499 7021.28929360939 7565.751374697631 6018.522917679209 5903.132135320628 6828.4847934105255 7178.772102369106 0.873980111513092 0.9515746436245669 1.1017059633211586 0.8702790165478695 0.852465046602875 0.9780627095394568 1.0539060534044278 0.8383777659821522 0.8223038774796184 0.9512051219953089 1.0 12.809521383123187 -8.28929814384001 24.96776280698467 0.9079150852735776 0.9538464984917246 0.0782531443770853 0.08454405580656742 1971.0207681669067 1766474.8851887824 0.016105482203610605 0.01947255560795394 5.136908809155577e-09 8.28929814384001 0.04593141321814709 QDVDNASLAR ddPTM_A549_PD325901_60min_R1 1 QDVDNASLAR 10 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 124.1 6.6396e-05 17419000.0 6201.2 7222.4 6415.4 6809.9 8096.1 6732.6 6514.6 6937.4 8136.7 6711.4 6788.3 False True 6830.741258917842 7831.056995015007 6850.787622934146 7230.53205659497 7527.457866028737 6677.771937786413 6762.516667925909 6799.028114714984 7794.742795136449 6287.641058625311 5953.382134579161 1.1473715451999456 1.3153963273295872 1.1507387679924936 1.2145251040744907 1.2644002511289905 1.1216770210330969 1.1359117414363566 1.142044632953097 1.3092965677210726 1.0561460555512918 1.0 12.539493785439744 -10.997954723191162 1.257592476988979 0.9992706315265789 1.210033110378055 0.4757853598156888 0.06849534444433288 0.2830972244738644 0.792323062190228 0.05128417565482524 0.011530007695309987 1.0047205306564135e-11 10.997954723191162 0.21076247885147614 QDVPPS(ph)PSQVAR ddPTM_A549_MK2206_60min_R1 2 QDVPPSPSQVAR 12 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QDVPPS(0.969)PS(0.031)QVAR;QDVPPS(0.968)PS(0.032)QVAR 123.68 7.8246e-06 22551800.0 18207.1 21751.9 18010.9 19069.6 26659.5 20693.6 19887.6 21447.8 28056.2 27783.0 27605.2 True False 21280.01335914281 22858.978800123215 20565.116447873595 23741.652856066874 22737.922865626097 22883.383016700052 23500.919490735923 24488.091331132746 21701.51549654501 21506.801003868495 20750.066975238693 1.025539502332041 1.101633976767454 0.9910867503422615 1.1441723481855783 1.0957999746583726 1.1028100797943 1.13257077766447 1.1801451706326869 1.0458527927857626 1.0364689921017036 1.0 14.34082837262052 -8.973066498762114 10.101081713387615 1.020150280195936 1.097365767937727 0.2854055247100068 0.049964851461606535 0.27722627323901594 98.75215606977669 0.008890945504125168 0.009248306538735188 1.063980090121438e-09 8.973066498762114 0.07721548774179121 QDVPPS(ph)PSQVAR ddPTM_A549_PD325901_60min_R1 1 QDVPPSPSQVAR 12 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QDVPPS(0.906)PS(0.094)QVAR 62.357 0.0076295 16588000.0 3618.3 4450.5 3878.9 4752.2 5761.6 4589.3 4667.0 4580.3 4484.2 4036.4 5234.0 True False 3985.6271523483233 4825.559254031111 4142.145479720555 5045.732600970737 5356.92509244095 4551.9262623775685 4844.605238880394 4488.942323324163 4295.744668225554 3781.5410151436686 4590.251181059666 0.8682808402280582 1.051262570105613 0.902378827723396 1.0992279947098498 1.1670222131949424 0.9916508014114273 1.055411795082205 0.9779295612071243 0.9358408720530791 0.8238200625593421 1.0 12.16435738552431 -11.801690607428142 6.6879002260172635 1.0004186059436297 0.9909062864814865 0.0 0.09893311970370677 2.2266491262180046 293.5791254330538 0.08479548043344738 0.011656162316262873 1.5787355646929053e-12 11.801690607428142 -0.00951231946214326 QDVPPSPS(ph)QVAR ddPTM_A549_PD325901_60min_R1 1 QDVPPSPSQVAR 12 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QDVPPS(0.319)PS(0.681)QVAR 78.139 0.001013 13765000.0 7887.3 9637.9 7752.8 8411.2 9982.1 9792.6 8106.8 9714.8 10735.0 10204.0 10244.0 True False 8688.012889676624 10450.119657212988 8278.951629373676 8930.74072077881 9280.991732375518 9712.852312326178 8415.308710211175 9521.030692886838 10283.845281968086 9559.71769857447 8984.052942066333 0.9670482738360154 1.1631854492176956 0.9215163448791427 0.9940659052622121 1.0330517631879503 1.081121446518571 0.9366940248991512 1.0597701008980251 1.1446777248846889 1.0640762871969156 1.0 13.133150714073743 -8.497989540491393 24.73329974019937 1.0701044548753371 1.0171233796224153 0.11649037615637114 0.0706106415362474 1268.8839815199603 1260938.6329230538 0.012734506217466721 0.015353724378122156 3.1769505831158764e-09 8.497989540491393 -0.05298107525292184 QDYQEILDS(ph)PIK ddPTM_A549_MK2206_60min_R1 1 QDYQEILDSPIK 12 0 Q8TBE7 Q8TBE7 SLC35G2 Solute carrier family 35 member G2 1 QDYQEILDS(1)PIK 144.73 8.211e-12 13499000.0 3565.4 3524.9 3402.0 3129.0 4607.9 3704.6 3370.0 3366.3 5020.3 4805.7 4349.9 True False 4167.152354339119 3704.302353934798 3884.454755490613 3895.6051404661475 3930.0840140482205 4096.618313085543 3982.285378013436 3843.4833338613817 3883.2100657717347 3720.0890322963987 3269.6997788674166 1.2744755286929028 1.1329181895770022 1.1880157256627824 1.1914259424195626 1.2019709085980832 1.2529035049525437 1.217936094240692 1.1754850884788928 1.1876350516550576 1.1377463632410285 1.0 11.674942459399743 -10.521795944151037 0.5921767320096789 0.979732185848424 1.2054711828739888 0.4109680551659405 0.05317459461977005 0.315720001037811 0.1745564786874271 0.03718556525790065 0.007709203081857752 3.00748905735271e-11 10.521795944151037 0.22573899702556477 QDYQEILDS(ph)PIK ddPTM_A549_PD325901_60min_R1 2 QDYQEILDSPIK 12 0 Q8TBE7 Q8TBE7 SLC35G2 Solute carrier family 35 member G2 1 QDYQEILDS(1)PIK;QDYQEILDS(1)PIK 206.49 2.183e-25 32759000.0 13424.0 14297.9 15263.900000000001 13004.1 17937.2 12259.599999999999 15177.5 16436.9 15135.6 18684.7 16387.8 True False 14786.794597773516 15502.83421148442 16299.800043287167 13807.333722546095 16677.35295198067 12159.761882257431 15755.08806794667 16109.053135001408 14499.503367466814 17504.944853249148 14372.20449082337 1.028846660734257 1.0786678008501032 1.1341196859322844 0.9606969989441811 1.1603893447681692 0.8460610124230713 1.0962193084579523 1.1208477547955162 1.0088572965076252 1.217972153431718 1.0 13.810993747124206 -7.968972964312649 0.1735840355689155 0.9773395648565691 1.0943282775915073 0.0 0.10787888533403307 9.287159327088293 1.0327756349677122 0.2370925452736961 0.36951133581600215 1.0740562723797076e-08 7.968972964312649 0.11698871273493816 QEAGDS(ph)PPPAPGT(ph)PK ddPTM_A549_MK2206_60min_R1 2 QEAGDSPPPAPGTPK 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 2 QEAGDS(1)PPPAPGT(1)PK;QEAGDS(1)PPPAPGT(1)PK 114.99 1.6199000000000002e-06 7792700.0 1937.77 2185.4 1905.8899999999999 1955.1 2559.8999999999996 2061.09 2000.1999999999998 2204.2 3340.8 2152.7 2817.1000000000004 True False 2264.8182020720565 2296.627525401885 2176.173860653147 2434.0995877677724 2183.342101079023 2279.1931757591865 2363.6104489918325 2516.6521000793937 2584.1141341613466 1666.4035748849185 2117.5363219953083 1.069553413817227 1.084575268696134 1.027691396860001 1.149496026341675 1.0310765763024585 1.0763419508249816 1.1162077478626926 1.1884811957832238 1.2203399334026026 0.786953950954996 1.0 11.048171000908148 -7.747240653711159 7.19320274850243 1.1152187205626696 1.0730316718213868 0.0 0.1157061636005931 0.4151977306729012 101.96400096519766 0.01343307538703104 0.01954778473935116 1.789613908262994e-08 7.747240653711159 -0.04218704874128276 QEAGDS(ph)PPPAPGT(ph)PK ddPTM_A549_PD325901_60min_R1 1 QEAGDSPPPAPGTPK 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 2 QEAGDS(1)PPPAPGT(1)PK 133.94 2.6747e-09 6897800.0 1978.5 2217.9 2198.7 2336.9 3081.1 2245.8 2225.3 2785.1 2818.0 2064.1 2208.7 True False 2179.3558635052823 2404.8102167207285 2347.9170038571747 2481.2450055150275 2864.694165217964 2227.510949392616 2309.9850092308848 2729.5489956313186 2699.5692598589726 1933.7723737384895 1937.0439021028817 1.1250936858681124 1.2414846220625322 1.212113469038179 1.2809441246124331 1.4788999681979393 1.1499537759440555 1.1925310555548756 1.4091311986620862 1.3936541432686593 0.9983110716484843 1.0 10.919640936914226 -10.919390439293485 1.184871533187156 1.000621434104028 1.2866183898774075 0.49578761331261323 0.10684636724167695 0.33390822189508995 0.8357823528279095 0.07720482579386617 0.01843146785869414 1.2039530761569968e-11 10.919390439293485 0.28599695577337947 QEAGDS(ph)PPPAPGTPK ddPTM_A549_MK2206_60min_R1 2 QEAGDSPPPAPGTPK 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 QEAGDS(1)PPPAPGTPK;QEAGDS(1)PPPAPGTPK 149.09 7.4496e-14 29945000.0 4451.799999999999 4592.299999999999 4700.299999999999 4653.7 6604.6 5040.4 4473.799999999999 5001.299999999999 7760.5 6592.1 7205.0 True False 5203.155003939779 4826.028454700776 5366.873217881406 5793.8567089125345 5633.072089060714 5573.771782453262 5286.631550194813 5710.249590838883 6002.7591409719635 5102.940031587716 5415.7996521160785 0.960736241767508 0.8911017328373908 0.9909659815027397 1.0698063224419205 1.0401182560104012 1.029168754474782 0.9761497636141697 1.0543686911696883 1.1083790994053013 0.9422320542440816 1.0 12.402958654622855 -5.988783799861273 4.5065375335844795 1.045460262546901 0.9269404013945128 0.3607598699556803 0.0476445936290106 0.1141433552579296 5.882693218918192 0.006409976957732158 0.020097227148958296 1.0261626426014322e-06 5.988783799861273 -0.1185198611523881 QEAGDS(ph)PPPAPGTPK ddPTM_A549_PD325901_60min_R1 2 QEAGDSPPPAPGTPK 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 QEAGDS(1)PPPAPGTPK;QEAGDS(1)PPPAPGTPK 191.93 6.5645e-34 29328000.0 8798.8 9734.6 8872.1 8596.3 12296.4 9300.599999999999 9046.7 10445.8 11046.9 11357.3 11246.8 True False 9692.047698665785 10554.96890558167 9474.214058271351 9127.273927386204 11432.743284277098 9224.858997204099 9390.977119044192 10237.450324428428 10582.637209629556 10640.198139751052 9863.51489933929 0.9826160144306173 1.070102191084914 0.960531225933058 0.9253571389644879 1.1590942377998459 0.9352506780135779 0.9520923539815658 1.037910970775153 1.0729073071444781 1.0787430493427639 1.0 13.26788613250431 QEAGDSPPPAPGT(ph)PK ddPTM_A549_MK2206_60min_R1 2 QEAGDSPPPAPGTPK 15 0 J3KR72;P49848-4;P49848-2;P49848;P49848-3 J3KR72 TAF6 Transcription initiation factor TFIID subunit 6 1 QEAGDS(0.001)PPPAPGT(0.999)PK;QEAGDS(0.003)PPPAPGT(0.997)PK 129.88 2.9998000000000003e-09 9763800.0 3575.9 4155.9 4779.4 4169.4 5565.5 4419.8 4411.6 4426.7 6254.9 6495.3 6456.5 True False 4179.4244976387645 4367.417558715883 5457.190787299191 5190.903187171478 4746.822322573268 4887.500302374208 5213.130615324652 5054.198281200186 4838.175137022813 5028.007218818238 4853.172859665157 0.8611736318675288 0.8999097466759532 1.1244583585006918 1.0695895937095514 0.978086390044795 1.0070731959692487 1.0741695723742117 1.0414214427031347 0.9969097077157522 1.036024754157457 1.0 12.244712531399347 -5.587767666027866 9.28348201120108 1.016620970058815 0.8707749155547065 0.6363790328258006 0.04377186058521024 0.14295398445235746 18.967077460926777 0.006274363530001325 0.024422110246499457 2.5836419886937085e-06 5.587767666027866 -0.14584605450410837 QEAGGLGIS(ph)IK ddPTM_A549_MK2206_60min_R1 2 QEAGGLGISIK 11 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 QEAGGLGIS(1)IK;QEAGGLGIS(1)IK 110.98 7.3516e-05 5590500.0 4076.5 4903.200000000001 4693.7 3867.9 5816.799999999999 5034.0 3933.5 4373.9 6933.200000000001 6409.5 6865.700000000001 True False 4764.513539143831 5152.751936739507 5359.337238637947 4815.535673636629 4961.156425468368 5566.694538701244 4648.166033951292 4993.913719506965 5362.841270045337 4961.589498408924 5160.7572063196885 0.9232198587659518 0.9984488187953546 1.0384788557917595 0.9331064185192993 0.961323353749931 1.0786584828839572 0.9006752009684365 0.9676707350990253 1.039157832009261 0.9614072703000113 1.0 12.333367043654906 -8.75178029823873 24.900883682923634 1.0184911988264882 0.97718120774347 0.010904460204819721 0.0518603596925456 288.3764217936436 743426.7073300902 0.008090977082382687 0.009117109279597512 1.7710046511165206e-09 8.75178029823873 -0.04130999108301825 QEAGGLGIS(ph)IK ddPTM_A549_PD325901_60min_R1 2 QEAGGLGISIK 11 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 QEAGGLGIS(1)IK;QEAGGLGIS(1)IK 119.32 1.4065999999999999e-05 10366900.0 7860.2 7605.3 8391.9 7414.4 9814.6 7516.799999999999 7574.0 8963.099999999999 8790.0 8337.5 9253.5 True False 8658.161717626592 8246.225321802669 8961.424798594178 7872.370648675858 9125.25635453189 7455.585672987092 7862.23271465183 8784.32393908407 8420.586868048395 7811.068827113351 8115.378162769509 1.0668833348206965 1.0161233594305488 1.1042522749840584 0.9700559223218355 1.1244400657008624 0.9186984911178493 0.9688066972308178 1.082429402906133 1.0376086855297852 0.9625021373554443 1.0 12.986442608127955 -7.238813370972032 24.977067009885253 1.013291577192911 1.0519831194902831 0.18797609074462263 0.056613871722851414 1414.1290715875023 1561071.2528496108 0.007679521505986816 0.013292912578837872 5.77014370055924e-08 7.238813370972032 0.03869154229737215 QEAGISEGQGT(ph)AGEEEEK ddPTM_A549_MK2206_60min_R1 1 QEAGISEGQGTAGEEEEK 18 0 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 QEAGIS(0.003)EGQGT(0.997)AGEEEEK 115.15 5.9002e-10 1969200.0 571.7 713.38 731.5 523.82 1084.8 809.84 584.79 914.17 1006.1 860.62 1132.7 True False 668.1889832769602 749.6879949076588 835.2376994830646 652.1559235151735 925.2273570258709 895.5367312717151 691.0387733556312 1043.7563970282088 778.2199564115577 666.2053442734516 851.4193290703515 0.7847942376484958 0.8805155923888042 0.9809945240438042 0.7659632583479754 1.0866882221667542 1.0518163033126515 0.8116315307407493 1.225901693079797 0.9140266491967962 0.7824644350050973 1.0 9.733726032580982 -4.219112664124677 0.6120910749944855 0.9768675863782006 0.22530084097083547 0.1365173562387152 0.13160808840646424 12.11396462515576 1.2084948468165866 0.018667985776965258 8.63406065520064 6.037919741080823e-05 4.219112664124677 -0.7515667454073651 QEAGISEGQGT(ph)AGEEEEK ddPTM_A549_PD325901_60min_R1 2 QEAGISEGQGTAGEEEEK 18 0 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 QEAGISEGQGT(1)AGEEEEK;QEAGISEGQGT(1)AGEEEEK 144.72 9.9266e-17 2246200.0 929.97 885.23 1202.2 816.99 1446.2 688.98 1118.6 957.53 1220.5 1360.1 1017.8 True False 1024.3798697922705 959.8314388149554 1283.7885214158794 867.4536167810871 1344.623901119152 683.3691753105911 1161.168935121407 938.4313129822466 1169.2066294030788 1274.2230538838824 892.6170523657864 1.1476140491348006 1.0753003611918732 1.4382298859441847 0.9718093716471063 1.5063838379015608 0.7655793416666127 1.3008590100803614 1.051325773460225 1.3098636490354079 1.4275136807062894 1.0 9.801897557566111 -11.095990854139888 1.4361111804914786 1.0002213231115389 1.188937524939365 0.0 0.23837662102109144 0.7241909472365172 2.6742246646801817 0.1298677546619507 0.028504734307148966 8.016949462009121e-12 11.095990854139888 0.1887162018278261 QEAGISEGQGT(ph)AGEEEEKKK ddPTM_A549_MK2206_60min_R1 1 QEAGISEGQGTAGEEEEKKK 20 2 F8VVL1;O43583 F8VVL1 DENR Density-regulated protein 1 QEAGISEGQGT(1)AGEEEEKKK 160.88 2.0805999999999997e-27 16290000.0 3094.6 3135.6 3457.3 2665.5 4162.9 3568.8 2894.1 2739.5 5143.8 4578.4 3911.4 True False 3616.892824294003 3295.188646769541 3947.597127030485 3318.5476196588415 3550.5429245602836 3946.448047222285 3419.920508162817 3127.83251436689 3978.7375129607112 3544.1362601631013 2940.091430851746 1.2301973967000703 1.1207776099040985 1.3426783553757933 1.1287225916975843 1.2076301054119565 1.3422875240580519 1.1632020937430727 1.0638555255612425 1.3532699939906525 1.2054510356286312 1.0 11.521645305296978 -11.042727790367136 1.3297411628337596 0.9995120523519109 1.2288759471206654 0.02364479189084523 0.10994239977795614 0.3347718211376011 1.0515265812415895 0.06894348789746589 0.015274282719132858 9.063004792202616e-12 11.042727790367136 0.22936389476875452 QEAGKEGTAPS(ph)ENGETKAEEAQK ddPTM_A549_MK2206_60min_R1 1 QEAGKEGTAPSENGETKAEEAQK 23 2 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 QEAGKEGT(0.008)APS(0.985)ENGET(0.007)KAEEAQK 82.62 8.3108e-06 6892900.0 3364.5 4145.0 3503.6 3165.4 4078.9 2149.4 1757.1 1862.8 3522.3 5876.1 6003.0 True False 3932.345345872541 4355.962795273547 4000.4631632383634 3940.9231421002037 3478.8992132861586 2376.8480813437536 2076.3423257292006 2126.8576045857417 2724.504673957292 4548.684928871308 4512.289425628426 0.8714745387425772 0.9653553627418066 0.8865706043847618 0.873375524122403 0.770983171763556 0.5267499172025585 0.4601527361999898 0.4713477802434037 0.6037965247714248 1.008065861874056 1.0 12.139643892187642 -6.755044629637955 3.543218764227491 0.7301229855081183 0.907583587415724 0.22289257012662556 0.17913196473542983 0.4034430750010373 10.740854122008896 0.032212552422319546 0.06734615774839722 1.7577429727885456e-07 6.755044629637955 0.1774606019076057 QEAIPDLEDS(ph)PPVS(ph)DSEEQQESAR ddPTM_A549_MK2206_60min_R1 1 QEAIPDLEDSPPVSDSEEQQESAR 24 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 2 QEAIPDLEDS(0.997)PPVS(0.831)DS(0.172)EEQQES(0.001)AR 70.632 4.3385e-05 2766000.0 416.07 586.23 222.4 412.06 648.84 629.72 497.48 368.47 784.87 598.42 575.22 True False 486.2924440651476 616.066603009219 253.93966420373687 513.0147184980761 553.3964955131509 696.3565524256946 587.8656765145774 420.7017508920487 607.0981981798426 463.2365063792603 432.3769987356293 1.1246954520873673 1.4248366698754575 0.5873107610865411 1.1864986342896369 1.279893465960055 1.6105309821336538 1.3596136663921372 0.9729975279033767 1.4040945747695615 1.0713717606021398 1.0 8.756145967489587 -4.946783005992677 15.076890590773946 1.198259416475814 0.658301744581437 0.003996099104886852 0.2655901301114761 975465.3309808105 7448547.00944037 0.036855677410691866 15369576.910527335 1.1303605550490566e-05 4.946783005992677 -0.539957671894377 QEAIPDLEDS(ph)PPVS(ph)DSEEQQESAR ddPTM_A549_PD325901_60min_R1 2 QEAIPDLEDSPPVSDSEEQQESAR 24 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 2 QEAIPDLEDS(1)PPVS(0.971)DS(0.029)EEQQESAR;QEAIPDLEDS(0.999)PPVS(0.819)DS(0.182)EEQQESAR 112.35 4.7599e-12 22077000.0 537.5 1100.22 863.98 830.76 1076.72 795.1700000000001 889.5699999999999 1140.52 551.98 1177.32 800.59 True False 592.0666043134137 1192.9394006224252 922.6148783337978 882.0741584071477 1001.0949016823482 788.6943991577735 923.4230731413824 1117.771433879368 528.7822001621563 1102.9838142773112 702.1225053581496 0.8432525660339047 1.6990473763747425 1.3140368971126712 1.2562966600211818 1.4258122963480484 1.123300269025651 1.3151879708945495 1.5919891832967208 0.753119571195666 1.570927873497922 1.0 9.455578961691026 -8.77221862044607 24.999962548151846 0.8834175579086123 1.328015047911315 0.0 0.3018966899480505 130.02664522093124 301565.845097409 0.03639615238475632 0.038933405576943206 1.689590191043326e-09 8.77221862044607 0.44459749000270277 QEAKPQQAAGMLS(ph)PK ddPTM_A549_MK2206_60min_R1 4 QEAKPQQAAGMLSPK 15 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK 119.31 1.9076e-07 178177000.0 10411.7 13066.400000000001 12760.2 10910.7 14805.8 12987.599999999999 12700.5 14563.400000000001 16154.4 15911.5 17236.0 True False 12168.94041837455 13731.423948893196 14569.788233689396 13583.82198979993 12627.886433124659 14361.939211528857 15008.016452065178 16627.806548541987 12495.454193275884 12317.081098983315 12955.825510599967 0.9392639942872326 1.059864841314717 1.124574286815529 1.048472131604903 0.9746879056678402 1.1085313861149535 1.1583990877143402 1.2834231624173809 0.9644660761332866 0.950698285408826 1.0 13.661313322671129 QEAKPQQAAGMLS(ph)PK ddPTM_A549_PD325901_60min_R1 5 QEAKPQQAAGMLSPK 15 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK 138.04 1.8616e-10 233205000.0 23846.0 26162.2 26705.899999999998 23976.4 31086.000000000004 20906.9 25038.300000000003 26399.6 26925.800000000003 26729.2 27812.1 True False 26266.828365502606 28366.980410248874 28518.322969622648 25457.367773644775 28902.62660087812 20736.641138060615 25991.146207983475 25873.03926791443 25794.20226299175 25041.513750366186 24391.388015427885 1.0768894475742208 1.1629916424725961 1.1691963963504013 1.0437031200332938 1.1849521061530741 0.850162406704547 1.0655870092978603 1.060744851894012 1.0575126863086497 1.0266539048342427 1.0 14.574084237970418 QEASES(ph)PVK ddPTM_A549_MK2206_60min_R1 2 QEASESPVK 9 0 Q01167-2;Q01167;E9PPI7;Q01167-3 Q01167-2 FOXK2 Forkhead box protein K2 1 QEAS(0.009)ES(0.991)PVK;QEAS(0.104)ES(0.896)PVK 128.28 5.1303999999999995e-05 79379000.0 5994.700000000001 6115.5 5775.1 5067.1 7071.299999999999 5854.0 6369.5 6321.8 7969.5 7299.5 8273.5 True False 7006.458803656453 6426.752828587546 6594.0960195278785 6308.539727470759 6031.1211372944645 6473.466394429298 7526.75570185655 7217.9345097005325 6164.420974676383 5650.53788027708 6218.961613016289 1.1266284051330904 1.0334125258365239 1.0603210680262816 1.0144040307737199 0.9697955241710007 1.0409239994150037 1.2102913911066837 1.1606333916892801 0.9912299445255052 0.9085982888928759 1.0 12.60245799672011 -8.876972791931795 20.68971881080129 0.9958479657879413 1.0728378751704968 0.307192530660069 0.07000639388027452 2.996615166855967 524.9092329977589 0.012121822472404953 0.012904504337527122 1.3274776201270942e-09 8.876972791931795 0.07698990938255545 QEASES(ph)PVK ddPTM_A549_PD325901_60min_R1 2 QEASESPVK 9 0 Q01167-2;Q01167;E9PPI7;Q01167-3 Q01167-2 FOXK2 Forkhead box protein K2 1 QEAS(0.016)ES(0.984)PVK;QEAS(0.262)ES(0.738)PVK 121.71 0.00012289 116230000.0 22294.2 22573.2 23179.9 21174.7 28229.0 19664.3 23538.9 23064.0 23510.9 23821.1 22180.5 True False 24557.490771877416 24475.522784652283 24753.027406062178 22482.61312776715 26246.292424763204 19504.160460477884 24434.685720480313 22603.970426642012 22522.818634357114 22317.03168066564 19452.439113774155 1.2624376114606832 1.2582238474825151 1.272489648279362 1.1557734737669656 1.349254572717226 1.0026588617705583 1.256124518759103 1.1620121412248132 1.1578403357350102 1.1472613562822096 1.0 14.247663443589818 -14.999999999990015 0.09869987203077006 0.28531633587408506 1.3643057762887998 0.2678535481334313 0.09013338084371401 56.10348524131554 0.39907780004696475 8.2108312241117 0.5172647510670187 1.000000000022991e-15 14.999999999990015 1.0789894404147147 QEDAPVVY(ph)LGSFR ddPTM_A549_PD325901_60min_R1 1 QEDAPVVYLGSFR 13 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 QEDAPVVY(1)LGSFR 145.83 1.8378e-12 5009000.0 1817.0 2349.5 2014.7 2356.6 2693.9 2215.7 2532.1 2453.8 2541.3 2414.8 2229.3 True False 2001.4605023952977 2547.5006105709685 2151.42965737529 2502.1618297730806 2504.6897574504796 2197.656073812993 2628.460451118286 2404.857034031138 2434.4979986088038 2262.329115887654 1955.1102326970415 1.0237072411177126 1.3029958965826365 1.1004134812426556 1.279806011920561 1.2810989966511006 1.1240573738808393 1.3444052448604749 1.230036544135764 1.2451973080057255 1.1571363486583615 1.0 10.933034236277589 -10.690096047605147 0.89203101431374 0.9963972861012843 1.2199461406459915 0.14970896527853428 0.10208950170350715 0.42035379729749534 0.5799861876277959 0.06198661154765896 0.015297532609847635 2.0412864483583282e-11 10.690096047605147 0.2235488545447072 QEDVGFRGNS(ph)PEMR ddPTM_A549_MK2206_60min_R1 2 QEDVGFRGNSPEMR 14 1 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 QEDVGFRGNS(1)PEMR;QEDVGFRGNS(1)PEMR 103.5 7.0523e-06 22606000.0 3158.7 3260.0 2550.3 3114.6 3907.2000000000003 2631.2 3161.5 2154.32 4378.9 4682.5 4539.5 True False 3691.811337199466 3425.9200754141807 2911.9708885736964 3877.677139819705 3332.4560558365447 2909.6318375507954 3735.90362688115 2459.701457328298 3387.0861416664047 3624.719997862514 3412.2168661736196 1.0819392441897684 1.0040159256512695 0.8533956084213113 1.1364099328680834 0.9766249293449755 0.8527101153490249 1.0948611338031704 0.7208514446171618 0.9926350740609884 1.0622771470932886 1.0 11.736493625870049 -6.969774744881987 24.99980026277447 0.9703548790963228 1.01235799109262 0.05384942928835801 0.11559650417637111 701.1317848219784 579914.5499679694 0.015479220535084905 0.029252739875871757 1.0720752133201915e-07 6.969774744881987 0.04200311199629714 QEDVGFRGNS(ph)PEMR ddPTM_A549_PD325901_60min_R1 2 QEDVGFRGNSPEMR 14 1 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 QEDVGFRGNS(1)PEMR;QEDVGFRGNS(1)PEMR 96.48700000000001 1.2845999999999999e-05 20435000.0 4187.700000000001 4666.4 5062.299999999999 5458.7 5439.0 5613.2 4740.1 5838.7 5086.7 5549.0 5645.700000000001 True False 4612.832221178197 5059.653904732222 5405.858120082856 5795.871501392814 5056.98340353137 5567.487960250527 4920.487099382246 5722.242548128458 4872.923688475745 5198.6351930017345 4951.3146910409905 0.9316378596425611 1.0218808983980079 1.091802573135641 1.1705722344572407 1.0213415464546372 1.1244463960904068 0.9937738573323718 1.1557016479850089 0.9841676388077114 1.0499504712169176 1.0 12.27359593034196 QEEAEEQGAGS(ph)PGQPAHLAR ddPTM_A549_MK2206_60min_R1 3 QEEAEEQGAGSPGQPAHLAR 20 0 Q96S99 Q96S99 PLEKHF1 Pleckstrin homology domain-containing family F member 1 1 QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR 121.38 5.9354e-15 161277100.0 1995.73 1879.3899999999999 1909.0 2086.83 2603.79 2075.7999999999997 1518.01 1897.2 2570.48 2934.67 2660.97 True False 2332.5604330861083 1975.0429234762744 2179.7249054178674 2598.103443681359 2220.7759402197576 2295.4597781954776 1793.812767560291 2166.1339099313236 1988.2703842130804 2271.7260087831683 2000.177709964097 1.1661765959425563 0.9874337233323764 1.089765621604189 1.2989363048786273 1.1102893153726927 1.1476279166398073 0.8968266962601487 1.0829707276211 0.9940468660900984 1.1357620862717972 1.0 10.965912469609195 -7.735260941919921 24.999269175796517 0.9980728662132224 1.1312324706498982 0.25860509493725015 0.08989255159901048 169.82309708218696 162173.29077532425 0.011846121711608109 0.017567522366235617 1.839666322426838e-08 7.735260941919921 0.13315960443667574 QEEAEEQGAGS(ph)PGQPAHLAR ddPTM_A549_PD325901_60min_R1 4 QEEAEEQGAGSPGQPAHLAR 20 0 Q96S99 Q96S99 PLEKHF1 Pleckstrin homology domain-containing family F member 1 1 QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR 148.26 3.9005e-21 198907100.0 3001.14 3487.8500000000004 3418.04 3635.33 4353.52 4039.7799999999997 3737.4599999999996 3618.83 3674.64 4135.71 4164.24 True False 3305.8135234775036 3781.783360110638 3650.0087487442456 3859.876077666541 4047.7437740286628 4006.88137106479 3879.691085516587 3546.6495967327846 3520.207659704818 3874.580564795315 3652.0648792922984 0.9051902506502316 1.035519215869866 0.9994369950655282 1.0569023840601957 1.1083438842995144 1.0971550351649964 1.0623280839053435 0.9711354299434184 0.963895159602687 1.0609287328833368 1.0 11.834496679831384 -8.267297703923806 24.457457453216335 0.9815879780112267 1.0419994257904965 0.06566496984070569 0.05697338764861886 412.1343745410567 1720582.8174920066 0.008745356549177644 0.01072414815880931 5.403837690323194e-09 8.267297703923806 0.06041144777926988 QEEAEY(ph)VR ddPTM_A549_MK2206_60min_R1 2 QEEAEYVR 8 0 P46108-2;P46108 P46108-2 CRK Adapter molecule crk 1 QEEAEY(1)VR;QEEAEY(1)VR 120.12 0.0012772 10388500.0 2247.1 2134.2 2021.06 1641.6 2611.3 2231.7 1806.98 1644.17 2683.4 2495.4 2687.9 True False 2626.355543679652 2242.8216640947667 2307.6766984514593 2043.7920736942244 2227.1812291681936 2467.857012717433 2135.284876072023 1877.236132559449 2075.6141845092666 1931.687406869432 2020.4202477339081 1.2999055749047048 1.1100768103122618 1.1421765848168155 1.0115678042657363 1.102335631246117 1.2214572762698095 1.056851849741135 0.929131518388289 1.0273180477364863 0.9560819879111792 1.0 10.980439689650614 -2.0000000000000004 0.2621251377472082 1.001940706816855 2.6406091270313405 0.5405076741168298 0.07257742516770815 27.83243257526526 0.3420337382235664 0.03065307844089013 20.768835097695032 0.00999999999999999 2.0000000000000004 1.6386684202144854 QEEAEY(ph)VR ddPTM_A549_PD325901_60min_R1 2 QEEAEYVR 8 0 P46108-2;P46108 P46108-2 CRK Adapter molecule crk 1 QEEAEY(1)VR;QEEAEY(1)VR 143.37 0.0010199 10207100.0 1965.9700000000003 1997.17 2073.2 1622.8200000000002 2354.3 1640.6100000000001 2239.7 2396.8999999999996 2330.57 2496.7 2247.2 True False 2165.553827129381 2165.4785249687243 2213.8998191643664 1723.0579057083726 2188.942089894079 1627.2494161025118 2324.9330091108654 2349.091949168326 2232.6242476754896 2339.057935910513 1970.8086461744888 1.0988148602518613 1.0987766514887718 1.12334590345021 0.874289804366841 1.1106822035426962 0.8256760083030611 1.17968480279593 1.1919431923175892 1.1328467895699603 1.186851874458146 1.0 10.94457199071531 QEEEAAQQGPVVVS(ph)PASDYKDK ddPTM_A549_MK2206_60min_R1 1 QEEEAAQQGPVVVSPASDYKDK 22 1 I3L0X5;O75391;I3L4C3 I3L0X5 SPAG7 Sperm-associated antigen 7 1 QEEEAAQQGPVVVS(0.999)PAS(0.001)DYKDK 195.21 8.044499999999998e-61 35115000.0 6603.0 6860.3 5680.2 5221.3 8888.4 7530.6 6087.1 7140.4 8944.5 8885.9 8810.6 True False 7717.42497214933 7209.459967289535 6485.737772527279 6500.518734393066 7580.928134392285 8327.483093592291 7193.047277301361 8152.573566557886 6918.585031431448 6878.569018474424 6622.684859810398 1.1653015560173088 1.088600789543825 0.9793215153397712 0.9815533838611747 1.1446910573077338 1.2574179913236427 1.0861225363375198 1.2310073239376949 1.044679790430119 1.0386375260306968 1.0 12.6932004939417 -8.978354417721114 20.173792856467184 1.0197107472284774 1.1129826261173286 0.18847155493064727 0.08297629039495923 21.412245949332146 19957.71579566632 0.015505329389631563 0.01593771723852148 1.051103742172158e-09 8.978354417721114 0.09327187888885113 QEEEAAQQGPVVVS(ph)PASDYKDK ddPTM_A549_PD325901_60min_R1 2 QEEEAAQQGPVVVSPASDYKDK 22 1 I3L0X5;O75391;I3L4C3 I3L0X5 SPAG7 Sperm-associated antigen 7 1 QEEEAAQQGPVVVS(0.999)PAS(0.001)DYKDK;QEEEAAQQGPVVVS(1)PASDYKDK 195.21 8.044499999999998e-61 117541000.0 9863.8 9906.2 10546.2 9272.7 11185.400000000001 8273.5 9933.9 9679.8 10141.7 10682.599999999999 11473.9 True False 10865.16571465422 10741.030239811926 11261.928551452454 9845.453619170352 10399.776091535165 8206.123359070181 10311.940000538656 9486.728795343797 9715.47961771176 10008.09881289608 10062.683039044794 1.0797483804762276 1.0674121601699107 1.1191775103870807 0.978412375801607 1.0334993213223944 0.8155005307460377 1.0247704275814618 0.9427633523319572 0.9654959398019565 0.9945755793025659 1.0 13.29672740547191 -6.273859535632822 23.514271122423448 0.9746481824920491 1.0866426274104644 0.4691205233354707 0.056354336391124506 215.32844834234692 407667.87618609675 0.007417709333140384 0.017365619849343674 5.32280387491564e-07 6.273859535632822 0.11199444491841526 QEEEAAQQGPVVVS(ph)PASDYKDKYSHLIGK ddPTM_A549_PD325901_60min_R1 1 QEEEAAQQGPVVVSPASDYKDKYSHLIGK 29 2 I3L0X5;O75391;I3L4C3 I3L0X5 SPAG7 Sperm-associated antigen 7 1 QEEEAAQQGPVVVS(0.984)PAS(0.015)DYKDKYSHLIGK 95.323 2.8197e-10 3193100.0 1173.5 1157.3 1125.6 1153.1 1362.6 1536.0 1485.0 1709.2 1403.3 1415.7 1533.6 True False 1292.63285611496 1254.829732544703 1201.9899847826598 1224.324368119892 1266.8956767148077 1523.4913252591768 1541.5124876231803 1675.1086651585383 1344.3241811072025 1326.3124603951258 1344.9769222913828 0.9610818109152042 0.9329749170765698 0.8936881851733768 0.9102939595677672 0.9419460332125615 1.1327267405180947 1.1461256041456591 1.2454553214970583 0.999514682242229 0.9861228385506725 1.0 10.393365703257063 -7.0803385196078725 9.018638153125142 1.0407166356375457 0.9232951738141686 0.44168211669248103 0.08000007669771775 0.4170980617123452 44.243813997396416 0.013740323002380888 0.023844313711546522 8.311156886406472e-08 7.0803385196078725 -0.1174214618233771 QEEEDRDS(ph)PGPQVPDPK ddPTM_A549_MK2206_60min_R1 2 QEEEDRDSPGPQVPDPK 17 1 M0R353;Q6NSJ2-2;Q6NSJ2 M0R353 PHLDB3 Pleckstrin homology-like domain family B member 3 1 QEEEDRDS(1)PGPQVPDPK;QEEEDRDS(1)PGPQVPDPK 93.572 1.1378e-06 26078000.0 4410.6 4630.5 3903.7 4218.8 5691.700000000001 4338.2 4656.4 5063.3 6324.6 6012.0 6370.2 True False 5155.001451183069 4866.172671535386 4457.303359496976 5252.406189389126 4854.4584697493965 4797.265444535902 5502.407606582127 5781.038280705919 4892.088198310845 4653.88502448466 4788.303531423987 1.0765820122622907 1.0162623650736364 0.9308731850947269 1.096924235257726 1.013815945019203 1.0018716259429046 1.1491350893843135 1.207324941446789 1.0216746215451369 0.9719277389043562 1.0 12.225298892540925 -5.246913468364844 21.722385972747706 1.031854851810939 1.0765821833657552 0.004877640508093362 0.07696095747906045 1508.7126877948522 2255910.860630192 0.010611750836423366 0.2703026276833393 5.6635212144860234e-06 5.246913468364844 0.04472733155481623 QEEEDRDS(ph)PGPQVPDPK ddPTM_A549_PD325901_60min_R1 1 QEEEDRDSPGPQVPDPK 17 1 M0R353;Q6NSJ2-2;Q6NSJ2 M0R353 PHLDB3 Pleckstrin homology-like domain family B member 3 1 QEEEDRDS(1)PGPQVPDPK 98.3 3.3325000000000005e-07 13025000.0 4116.4 4182.4 4300.2 4427.8 4626.9 5339.4 4656.2 4724.5 4372.1 4961.3 5075.0 True False 4534.293897666486 4534.865526134077 4592.037431203263 4701.2951497365875 4301.922505938458 5295.917696672426 4833.394238970407 4630.26614120145 4188.355841387303 4648.042671299243 4450.807173075622 1.0187576593063619 1.0188860918457558 1.0317313809912927 1.0562792246260968 0.9665488390425414 1.189878035765996 1.0859590296809933 1.0403205443748347 0.9410328685376504 1.044314545778744 1.0 12.119851283436176 -8.658931201974113 6.300306270555761 0.9722730358964201 1.0532033969027865 0.12595227593120206 0.058056954218784367 0.19488364128506208 10.489250782794459 0.00949486836225572 0.010755763099613503 2.193152332351315e-09 8.658931201974113 0.08093036100636641 QEEEQDLDGEKGPSSEGPEEEDGEGFS(ph)FKYSPGKLR ddPTM_A549_MK2206_60min_R1 2 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGKLR 36 3 P84157-2;P84157-3;P84157 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 QEEEQDLDGEKGPS(0.003)S(0.003)EGPEEEDGEGFS(0.495)FKY(0.003)S(0.495)PGKLR;QEEEQDLDGEKGPS(0.004)S(0.004)EGPEEEDGEGFS(0.46)FKY(0.073)S(0.46)PGKLR 60.595 0.00030502 4865700.0 1115.37 1313.27 946.38 691.3 1236.49 935.02 1051.1100000000001 851.55 1135.86 1053.83 1488.65 True False 1303.6171878216255 1380.1098335703005 1080.5909146094089 860.6685310336364 1054.6039589683985 1033.9631957839558 1242.0830812117817 972.2598202625022 878.5895235956979 815.7690710832784 1118.977120350118 1.1650079024079913 1.2333673392164413 0.9656952720099421 0.7691565049733465 0.9424714230425215 0.9240253236459722 1.1100165129588575 0.8688826630863469 0.7851720179236507 0.7290310554589637 1.0 10.127964822589549 -5.83995475868576 4.860088243450739 0.9064910150289741 1.19912995148042 0.5509901224075895 0.10512187181125555 0.1096851632712162 4.605777651295818 0.014560587461585027 0.04886382626294218 1.4455903529057672e-06 5.83995475868576 0.2926389364514458 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGK 34 2 P84157-2;P84157-3;P84157 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.071)FKYS(0.929)PGK;QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.001)FKYS(0.999)PGK 246.95 1.2346999999999997e-132 491300000.0 13694.7 13363.7 13310.4 12678.4 13673.0 15044.1 14213.8 14750.6 17367.7 15542.6 16999.5 True False 16006.030556730791 14043.855249022228 15198.0148669848 15784.608569155007 11661.719812513578 16636.056676534627 16796.263473592706 16841.542721817943 13433.943680517852 12031.515865195497 12778.054987667909 1.2526186944866178 1.099060480063354 1.189384055840454 1.2352903931301533 0.9126365337892423 1.301924016807728 1.3144616680553314 1.3180051845192169 1.0513293058672029 0.9415764665911286 1.0 13.641380632642072 -8.912265682195821 7.725175545720814 1.0224835801732237 1.1973362962211018 0.39029682944869915 0.11345205267443668 0.2006006998556911 15.339487702558198 0.019491395676299636 0.020682004596559347 1.2238672622311913e-09 8.912265682195821 0.1748527160478781 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGK 34 2 P84157-2;P84157-3;P84157 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.004)FKYS(0.996)PGK;QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYS(1)PGK 240.48 8.179799999999999e-132 650910000.0 12299.3 10456.1 11681.900000000001 10140.4 13681.7 9961.8 12035.9 11811.2 10582.099999999999 12665.1 10904.900000000001 True False 13547.915881733887 11337.272242686146 12474.703982971352 10766.749477480666 12720.744591302653 9880.674403624267 12493.932760797203 11575.616350292845 10137.371137244021 11865.423424560506 9563.666431856616 1.4166027201247544 1.185452496013625 1.304385098733479 1.1257972613533 1.330111697427024 1.0331471171675013 1.3063957060630906 1.2103743300513299 1.0599879459907124 1.2406772558520784 1.0 13.223348096278063 -7.7223582429200235 0.1882135946851086 0.9209427785987514 1.426527078178632 0.08033832580135714 0.12300452798899932 2.3621545493949765 0.24736169579762837 0.19979760830797055 0.380771871634033 1.8951420024278923e-08 7.7223582429200235 0.5055842995798805 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYS(ph)PGKLR ddPTM_A549_MK2206_60min_R1 2 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGKLR 36 3 P84157-2;P84157-3;P84157 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.062)FKYS(0.938)PGKLR;QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.186)FKY(0.017)S(0.797)PGKLR 173.63 3.396099999999999e-64 76555000.0 4044.24 3811.97 3883.63 2914.0 5450.900000000001 3617.3599999999997 3526.04 4212.05 4970.8 4586.9 4817.2 True False 4726.8088398251075 4005.9829907596895 4434.3871317066505 3627.930130814431 4649.07983076357 4000.1466341907662 4166.675826198959 4809.120986362131 3844.921736736479 3550.716104259598 3620.9562920435205 1.3054034510749337 1.10633287663875 1.224645307498054 1.001925966017937 1.2839370198914546 1.1047210492378647 1.150711439227966 1.3281356079689264 1.0618525678382496 0.9806017576245634 1.0 11.822155047051258 -8.967793020930907 16.607848640242015 1.0272827266769498 1.1806183478492125 0.4061710541109921 0.09389228519475318 3.5362607232217735 1823.4948620543178 0.014997513881062005 0.015783548390090028 1.0769783651404044e-09 8.967793020930907 0.15333562117226274 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYS(ph)PGKLR ddPTM_A549_PD325901_60min_R1 3 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGKLR 36 3 P84157-2;P84157-3;P84157 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.001)FKYS(0.999)PGKLR;QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.173)FKYS(0.827)PGKLR;QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.309)FKYS(0.691)PGKLR 243.46 8.785999999999997e-133 318596000.0 6672.5 6811.5 9345.5 8574.4 8023.299999999999 8798.6 10416.8 8873.8 8349.8 9738.2 9214.099999999999 True False 7349.887287965118 7385.529009961332 9979.741829056817 9104.02121412471 7459.771086882371 8726.947118766537 10813.217024291684 8696.805097638571 7998.886943211664 9123.328390068396 8080.824112992324 0.9095467473605806 0.9139574017069498 1.23499060114567 1.1266203900524567 0.9231448404982078 1.0799575633301284 1.338132951923335 1.0762274956159328 0.9898602953566429 1.1290096483352405 1.0 12.98028671663651 -8.751070616410011 10.07902857062757 0.9952013509910201 1.080850867877124 0.0 0.1321484069572256 0.40425056225429146 346.60769392083864 0.021919990479063078 0.02441222082675951 1.7739010206132107e-09 8.751070616410011 0.0856495168861039 QEEERQDGGQNES(ph)FKRYEEELEINDFPQTAR ddPTM_A549_MK2206_60min_R1 1 QEEERQDGGQNESFKRYEEELEINDFPQTAR 31 3 A0A0C4DG89;Q7L014 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 1 QEEERQDGGQNES(0.998)FKRY(0.002)EEELEINDFPQTAR 49.806000000000004 0.0015417 2993800.0 600.43 459.63 556.79 319.59 489.18 502.6 399.87 402.47 665.83 724.9 808.3 True False 701.7679048958986 483.0232037615397 635.7511943884831 397.88956434694035 417.2222700128277 555.7847984011213 472.52120299888236 459.52135501268197 515.0205681120244 561.1445865350848 607.5768020548824 1.155027483805262 0.794999417568132 1.0463717380886042 0.654879453924574 0.6866988150333299 0.9147564497548366 0.7777143587457106 0.7563181369968984 0.8476633182342973 0.9235780310196845 1.0 9.246922976995751 -10.40695793010339 0.9029893149821036 0.9941912396928846 0.8409261501873821 0.07678566330098435 0.14238272425197895 0.8069325256223903 1.246641612189095 0.07346328172946688 0.025434650357940243 3.917798267921821e-11 10.40695793010339 -0.15326508950550244 QEEEVDYES(ph)EEEEER ddPTM_A549_PD325901_60min_R1 1 QEEEVDYESEEEEER 15 0 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 QEEEVDY(0.034)ES(0.966)EEEEER 57.678999999999995 0.0099124 422780.0 213.3 0.0 121.56 262.3 198.95 186.84 0.0 0.0 0.0 0.0 184.81 True False 234.9540589768393 0.0 129.80979259966256 278.50167527347816 184.97643834024004 185.31843698660455 0.0 0.0 0.0 0.0 162.0795416071143 1.449621936532712 0.0 0.800901775218031 1.7183024613221984 1.1412695057382907 1.143379572455986 0.0 0.0 0.0 0.0 1.0 7.340558188806287 -7.741217571360645 24.972889946883953 0.4318181430275983 1.0191318922856176 0.3676863371897515 0.509854648641066 310.528425379468 383485.7528423481 0.08915219719699838 0.1321432631647573 1.814606359749336e-08 7.741217571360645 0.5873137492580194 QEEEVDYES(ph)EEEEEREGEENDDEDMQEERNPHR ddPTM_A549_MK2206_60min_R1 2 QEEEVDYESEEEEEREGEENDDEDMQEERNPHR 33 2 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 QEEEVDY(0.208)ES(0.792)EEEEEREGEENDDEDMQEERNPHR;QEEEVDYES(1)EEEEEREGEENDDEDMQEERNPHR 142.91 2.4247999999999997e-40 36941000.0 425.32000000000005 341.08000000000004 0.0 402.25 394.75 255.24 381.98999999999995 219.44 530.48 578.97 718.77 True False 497.10361792436026 358.43951512953004 0.0 500.8012680576886 336.68279792216305 282.24932738540014 451.392638441351 250.54629200681524 410.32712700248794 448.1802748878716 540.279571957179 0.920085903162297 0.6634334032491218 0.0 0.9269298601157934 0.6231640346913719 0.5224134726451779 0.8354797439521313 0.4637345274765873 0.7594718517971457 0.829534000821695 1.0 9.077562324278983 -9.739486394452525 0.55220091189648 1.0036244488113928 0.5994948215555186 0.14985235086864857 0.2503578090020959 0.8135958791521875 0.5256878928188922 0.14271208543697456 0.06284787318278248 1.8218541471185038e-10 9.739486394452525 -0.4041296272558742 QEEGADAS(ph)EEDPTPAGEEDVKDAR ddPTM_A549_MK2206_60min_R1 2 QEEGADASEEDPTPAGEEDVKDAR 24 1 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 QEEGADAS(1)EEDPTPAGEEDVKDAR;QEEGADAS(1)EEDPTPAGEEDVKDAR 147.8 1.8682e-28 30948000.0 1376.76 2030.0700000000002 1433.1799999999998 1503.75 2764.2 2063.57 1781.12 2385.8999999999996 2767.2 1984.99 2297.7 True False 1609.1234294496908 2133.391891869957 1636.4264745661494 1872.1688175059032 2357.5898417135973 2281.935607713097 2104.7264488092865 2724.1086315123034 2140.4336183103696 1536.579380364572 1727.1176767060517 0.9316814083673796 1.235232503635044 0.9474898535501831 1.083984515216411 1.3650429692839334 1.321239217506702 1.2186352309377135 1.5772571077540627 1.2393096586172354 0.8896784516125888 1.0 10.754150668522813 -6.54331794756685 24.917651155271685 1.1911158682782104 1.0508264434466759 0.15992546288261278 0.18723760125424363 415.4928611891257 506530.29005297535 0.027615471462707777 0.057491311511236376 2.8620818687846354e-07 6.54331794756685 -0.1402894248315345 QEEGADAS(ph)EEDPTPAGEEDVKDAR ddPTM_A549_PD325901_60min_R1 2 QEEGADASEEDPTPAGEEDVKDAR 24 1 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 QEEGADAS(1)EEDPTPAGEEDVKDAR;QEEGADAS(1)EEDPTPAGEEDVKDAR 139.16 5.8354e-24 32915000.0 2079.35 1646.18 2113.74 1943.26 2456.7 1400.5900000000001 2324.4 1984.7 1916.37 2308.1 1707.8600000000001 True False 2290.444081263434 1784.9093658692116 2257.1911073511897 2063.290756736332 2284.1498671549007 1389.1840594041346 2412.8563139604844 1945.1136015329696 1835.8316332561888 2162.36617209719 1497.804047016537 1.529201423794888 1.1916841655118753 1.5070002727307816 1.3775438521789167 1.5249991290280456 0.9274805086628244 1.6109292258667829 1.2986435745099132 1.2256821157032964 1.4436909663880189 1.0 10.54863317755816 -9.802445613846466 0.368701753510507 0.945076466010731 1.405702243514599 0.0 0.22317426463932244 1.1290279378830514 0.3158162067592212 0.2038109614234463 0.07234103544824162 1.5759933700609446e-10 9.802445613846466 0.4606257775038679 QEEGADAS(ph)EEDPTPAGEEDVKDAREEDGVDTIEEDLTR ddPTM_A549_MK2206_60min_R1 1 QEEGADASEEDPTPAGEEDVKDAREEDGVDTIEEDLTR 38 2 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 QEEGADAS(0.997)EEDPT(0.003)PAGEEDVKDAREEDGVDTIEEDLTR 90.20700000000001 1.1999000000000002e-09 22716000.0 791.36 509.45 792.27 766.94 889.84 811.67 695.06 645.43 757.12 988.68 941.21 True False 924.9222211055722 535.3788289631143 904.6257992747065 954.8403344292448 758.94571476392 897.5603806570592 821.3434049976318 736.9216790464762 585.6335288721982 765.3365013319185 707.4815809254925 1.3073445953117742 0.7567388938419544 1.2786563264181658 1.3496327822134533 1.0727427189992773 1.2686696090135874 1.1609396302914217 1.0416125294491365 0.8277721210863205 1.0817758680455583 1.0 9.466548778067855 -8.481566039306834 3.68350638719861 0.918757189022274 1.1646492562187127 0.2127406588800076 0.16395928742620935 0.20132290538674527 5.669470105416303 0.026507378692041266 0.03153251640700176 3.299392331656461e-09 8.481566039306834 0.24589206719643875 QEEGADAS(ph)EEDPTPAGEEDVKDAREEDGVDTIEEDLTR ddPTM_A549_PD325901_60min_R1 2 QEEGADASEEDPTPAGEEDVKDAREEDGVDTIEEDLTR 38 2 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 QEEGADAS(1)EEDPTPAGEEDVKDAREEDGVDTIEEDLTR;QEEGADAS(1)EEDPTPAGEEDVKDAREEDGVDTIEEDLTR 182.68 3.2436999999999995e-81 91075000.0 2019.96 2141.4700000000003 1875.47 1870.98 2306.9 1871.08 1534.8400000000001 1905.43 2029.69 2341.6 2451.1 True False 2225.024852184041 2321.939192389618 2002.750672317284 1986.546185296121 2144.8713023729583 1855.842544834597 1593.249176096674 1867.4247038690812 1944.3891877371036 2193.750976380043 2149.6302388030836 1.0350732940112235 1.0801574849833133 0.9316721714114041 0.9241339042579862 0.997786160454844 0.8633310563531764 0.7411735968990634 0.8687190337017521 0.9045226256306023 1.0205248031873269 1.0 11.069872805629158 -5.768876163130261 24.23377977659431 0.9276166339904808 1.0576153947001117 0.3333818340165442 0.07551990515877773 100.17037714596731 326426.5729652655 0.011323665281294826 0.036284735325101486 1.7026439394698732e-06 5.768876163130261 0.1299987607096309 QEELQRHLEDANR ddPTM_A549_MK2206_60min_R1 1 QEELQRHLEDANR 13 1 Q96ED9-2;Q96ED9 Q96ED9-2 HOOK2 Protein Hook homolog 2 0 57.492 0.036975 1634700.0 3584.1 3296.4 3958.9 3126.0 5383.8 3972.1 4500.7 3744.5 6472.4 4195.0 5448.1 False True 4189.008457168014 3464.1726799372086 4520.331549533155 3891.8701403314703 4591.850151876735 4392.424985533414 5318.4189319955685 4275.294342050308 5006.411734298946 3247.3465864459677 4095.1864100893285 1.0229103238982078 0.8459133072434777 1.103815821032321 0.9503523773040107 1.1212798862009734 1.0725824286561845 1.298700083320397 1.0439803989184098 1.222511317669112 0.7929667324655761 1.0 11.99971340851629 -6.767726238382247 24.877493572928564 1.1159633741345503 0.979907468002098 0.06740506284496861 0.1367285623137321 146.73902368900337 580658.5501950601 0.015531588927753978 0.0298787259985788 1.7071581731381602e-07 6.767726238382247 -0.13605590613245222 QEEQRGS(ph)PPLR ddPTM_A549_MK2206_60min_R1 4 QEEQRGSPPLR 11 1 E5RGI2;Q8TB36 E5RGI2 GDAP1 Ganglioside-induced differentiation-associated protein 1 1 QEEQRGS(1)PPLR;QEEQRGS(1)PPLR;QEEQRGS(1)PPLR;QEEQRGS(1)PPLR 89.541 8.4097e-05 79645900.0 3396.8100000000004 3981.82 3339.15 3372.4700000000003 4293.58 2972.54 3476.54 3342.05 4590.2 4886.5 5155.4 True False 3970.108483968885 4184.477630271683 3812.691680422248 4198.725301395931 3662.000069671033 3287.092209787642 4108.18231693734 3815.7958220988744 3550.5270290431713 3782.6362561783576 3875.1718981983663 1.024498677288266 1.0798172933224248 0.9838767880709585 1.0834939485776076 0.9449903554919872 0.8482442317761096 1.0601290535904495 0.9846778213562354 0.916224395282664 0.9761208936142858 1.0 11.92004459277227 -6.773649937969707 24.945269575365806 0.9596002766096671 1.0413395883583716 0.33146834763570376 0.05557811461870078 198.41206947922026 405341.0831509106 0.008265201037241161 0.0157021664922169 1.6840309232544342e-07 6.773649937969707 0.08173931174870452 QEEQRGS(ph)PPLR ddPTM_A549_PD325901_60min_R1 2 QEEQRGSPPLR 11 1 E5RGI2;Q8TB36 E5RGI2 GDAP1 Ganglioside-induced differentiation-associated protein 1 1 QEEQRGS(1)PPLR;QEEQRGS(1)PPLR 85.469 0.00011899 79417000.0 4275.3 4573.8 4111.6 3575.0 4780.9 4182.4 4084.2 4140.6 4548.5 4866.200000000001 4349.5 True False 4709.325308690488 4959.250177752496 4390.6379010593355 3795.8196305859133 4445.106077209618 4148.339921070301 4239.626465959994 4058.012484762139 4357.342362834827 4558.947301529113 3814.5390737521966 1.23457257027338 1.3000915921603855 1.1510271139365877 0.9950926067856818 1.1653062116459485 1.0875075181730303 1.1114387306012459 1.0638277407315815 1.1422985263980265 1.1951502431576024 1.0 11.897293025552514 -2.0000000000000004 0.2844777952094603 1.0557267275233837 2.7645748582215885 0.309270617041546 0.07414809298718313 30.137405749230652 0.3754684132506274 0.0254240101937056 26.17681871024646 0.00999999999999999 2.0000000000000004 1.7088481306982048 QEEQRGS(ph)PPLRAEGK ddPTM_A549_MK2206_60min_R1 2 QEEQRGSPPLRAEGK 15 2 E5RGI2;Q8TB36 E5RGI2 GDAP1 Ganglioside-induced differentiation-associated protein 1 1 QEEQRGS(1)PPLRAEGK;QEEQRGS(1)PPLRAEGK 115.42 2.1030999999999998e-07 239080000.0 7604.0 9062.0 8494.9 7316.6 10041.0 7827.9 7843.599999999999 6420.9 11534.900000000001 12509.8 11887.5 True False 8887.36930004899 9523.217093068495 9699.604556853976 9109.167328454654 8563.982201232273 8656.243182260523 9268.680590797092 7331.0822381815515 8922.263567450233 9683.82749156657 8935.50567169048 0.994612910179891 1.065772597877701 1.085512662991678 1.0194350116428632 0.9584216625103524 0.9687468734629403 1.0372866328273036 0.8204440249428667 0.9985180352711094 1.0837470029532774 1.0 13.125333660196034 -6.532413500047419 6.909085253993813 0.9838592453387698 1.050817122007638 0.17764791706355265 0.06429829091267046 0.16314023109938602 40.114288027778066 0.007967494305772403 0.017147087307779092 2.934853990892224e-07 6.532413500047419 0.06695787666886832 QEEQRGS(ph)PPLRAEGK ddPTM_A549_PD325901_60min_R1 2 QEEQRGSPPLRAEGK 15 2 E5RGI2;Q8TB36 E5RGI2 GDAP1 Ganglioside-induced differentiation-associated protein 1 1 QEEQRGS(1)PPLRAEGK;QEEQRGS(1)PPLRAEGK 96.234 3.6176e-06 357740000.0 10078.0 9838.2 10500.2 10352.7 13338.4 10060.3 13736.0 13719.3 13200.1 13971.2 13242.900000000001 True False 11101.111140968525 10667.299641165908 11212.806714831991 10992.162766312387 12401.556798981946 9978.372252281835 14258.730996627617 13445.657798917353 12645.34570158425 13089.056047660088 11614.107253659735 0.9558299143027494 0.9184777967161034 0.9654471471579282 0.9464492212992638 1.0678011256589763 0.8591596439009583 1.2277078801846377 1.1577005020924425 1.0887918826132383 1.1269963124833018 1.0 13.503590641727362 -7.738106369128867 24.99981110663519 1.06618595856804 0.956257760740803 0.4836074309622602 0.07777121305458319 230.26832837833612 246717.20340888487 0.01264053193575883 0.018742437786869265 1.827652525406696e-08 7.738106369128867 -0.10992819782723695 QEESES(ph)PVERPLKENPPNK ddPTM_A549_PD325901_60min_R1 1 QEESESPVERPLKENPPNK 19 2 D6RBF8;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3 D6RBF8 SRPK1 SRSF protein kinase 1 1 QEES(0.09)ES(0.91)PVERPLKENPPNK 125.58 1.7866e-15 41410000.0 3947.6 4116.0 4423.9 3943.1 5017.5 3975.0 4394.4 3927.7 4119.2 4737.6 4377.9 True False 4348.357445930474 4462.869765103258 4724.1324570717925 4186.656331570158 4665.088109435305 3942.6289179070495 4561.631296707949 3849.358942278958 3946.0843489038616 4438.467127476127 3839.446053794631 1.1325481293409165 1.1623733482835317 1.2304203238909428 1.0904323886599134 1.215041973261916 1.0268744143469446 1.1880962078369515 1.0025818538261606 1.027774395997526 1.1560175778715438 1.0 11.906682461990757 -8.057051498495124 0.7984902505522772 1.007100193448579 1.1662629321551816 0.21682436098194058 0.07290380761385191 0.2762551494240439 0.35394615783106964 0.01085577115656257 0.016504000977338323 8.768968328437145e-09 8.057051498495124 0.15916273870660258 QEGHLDSES(ph)PTNIPLTK ddPTM_A549_MK2206_60min_R1 1 QEGHLDSESPTNIPLTK 17 0 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 QEGHLDS(0.147)ES(0.655)PT(0.198)NIPLTK 59.857 0.0011788 13721000.0 993.58 1300.1 1185.0 1233.7 1692.3 1545.5 1080.7 1346.7 1860.2 1842.3 2186.9 True False 1161.2720133012465 1366.2695368239188 1353.050818711458 1535.9565553828977 1443.364911776255 1709.0437841801286 1277.0492011926185 1537.5988490957798 1438.8676701289928 1426.1231504670818 1643.832374630486 0.706441867932116 0.8311489406765334 0.823107537966338 0.9343754138728182 0.8780487195969153 1.0396703523765929 0.77687312946351 0.9353744778517419 0.8753128921995063 0.8675599607822893 1.0 10.682847476249199 -3.7883085288069025 0.4453049382173768 0.938474064023929 1.069866988847303e-37 0.4114479733480597 0.07033739644283364 9.977832796060271 0.48535788596969753 0.014391717948078846 6.648044683368885 0.00016281389692480552 3.7883085288069025 -0.938474064023929 QEGHLDSES(ph)PTNIPLTK ddPTM_A549_PD325901_60min_R1 2 QEGHLDSESPTNIPLTK 17 0 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 QEGHLDS(0.023)ES(0.883)PT(0.095)NIPLTK;QEGHLDS(0.018)ES(0.981)PT(0.001)NIPLTK 128.01 1.7841e-12 58690000.0 4188.0 4931.5 4260.9 5370.799999999999 5837.0 4492.5 4563.4 4856.9 4840.0 5164.4 6650.0 True False 4613.162676957351 5347.094812100758 4550.0702968731675 5702.542118028204 5427.029256556829 4455.914569483625 4737.062684188293 4760.0253193356575 4636.591631553381 4838.318902637979 5832.0921578232255 0.790996190066923 0.9168399036575772 0.7801780516739021 0.9777866953591874 0.930545867536911 0.7640336347405652 0.8122407115659088 0.8161780010541351 0.7950134370448539 0.8296026145862271 1.0 12.509797801752189 -10.861355310426246 1.1012884741662037 1.000255829924256 0.842212863547068 0.0 0.08241550065609271 0.3901361343390221 0.837814749743636 0.04725481300348343 0.01140422780472915 1.37608318986628e-11 10.861355310426246 -0.15804296637718807 QEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A549_MK2206_60min_R1 2 QEGPATQVDSAVGTLPATSPQSTSVQAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 QEGPATQVDSAVGTLPAT(0.599)S(0.4)PQS(0.001)TSVQAK;QEGPATQVDSAVGTLPAT(0.495)S(0.495)PQS(0.003)T(0.005)S(0.001)VQAK 163.75 5.1069999999999995e-46 21054000.0 1525.19 1684.94 1684.4 1986.49 2441.0 1937.53 1889.06 1501.25 3086.8999999999996 2810.3 2604.3 True False 1782.6047846846031 1770.696249039377 1923.2732481329788 2473.1801391769236 2081.932133573146 2142.558138571677 2232.2777496112935 1714.0567848853048 2387.7220787663628 2175.4512781618832 1957.5804349765301 0.910616367447489 0.9045330743002682 0.9824746987502648 1.2633862164680734 1.063523161743342 1.0944930283783534 1.1403249183158375 0.8755996710326005 1.2197312744367461 1.1112959852339173 1.0 10.934855872258952 -6.011934605702763 20.421187964599497 1.098050806301285 0.9165563144627316 0.37169922496204955 0.0975087852362819 42.345162957010515 72463.26659264762 0.014785899984191421 0.041737176189359335 9.728937071268739e-07 6.011934605702763 -0.18149449183855348 QEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_A549_PD325901_60min_R1 1 QEGPATQVDSAVGTLPATSPQSTSVQAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 QEGPATQVDSAVGTLPAT(0.646)S(0.337)PQS(0.014)T(0.003)S(0.001)VQAK 146.58 1.2746999999999997e-35 16484000.0 1390.7 1352.7 1295.1 1543.2 1827.2 1329.9 1420.7 1732.8 1476.3 1854.0 2114.8 True False 1531.88284022077 1466.6967763010628 1382.993274068962 1638.5199591385126 1698.8637754977963 1319.0697353269395 1474.76551593687 1698.237944644697 1414.2562449715406 1736.9381235943804 1854.6930068217393 0.8259495423697386 0.7908029905253381 0.7456723398331582 0.8834453751170024 0.915981118842424 0.7112065072091576 0.7951534353731537 0.9156436878763302 0.7625284830264469 0.93650977126983 1.0 10.856964692969855 -10.884212450957213 0.9639061035661416 1.0079461052501106 0.8133391729260709 0.43195249367305943 0.06595838476563799 0.3846145236225051 0.5899215691086936 0.05495197582176156 0.011180324859539582 1.305532083348104e-11 10.884212450957213 -0.1946069323240397 QEGPATQVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_A549_PD325901_60min_R1 1 QEGPATQVDSAVGTLPATSPQSTSVQAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 QEGPATQVDSAVGTLPAT(0.453)S(0.533)PQS(0.006)T(0.006)S(0.001)VQAK 153.27 4.3265e-37 15403000.0 1908.9 1647.9 1926.3 2108.6 2580.6 1642.8 1860.9 2312.9 1886.4 1818.3 2339.2 True False 2102.690122742094 1786.7743163055532 2057.0303017829056 2238.8434330219447 2399.3475585866986 1629.4215814686033 1931.7175678235526 2266.7673950650496 1807.1211681327072 1703.4922276869806 2051.49322941054 1.024955916304079 0.8709628141541323 1.0026990449166417 1.0913238225335193 1.1695615292262544 0.7942612522961084 0.9416153756347503 1.1049353527315149 0.8808808833612145 0.8303669752673025 1.0 11.00245867754135 -7.2582454635757125 24.9644887155652 0.9463508886859368 1.0246386039806838 0.19147377980722957 0.10377721403693835 483.7453454976301 3781069.431203348 0.015175679489029035 0.025610739676485254 5.517654928512912e-08 7.2582454635757125 0.0782877152947471 QEGT(ph)PEGLYL ddPTM_A549_PD325901_60min_R1 1 QEGTPEGLYL 10 0 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 1 QEGT(1)PEGLYL 66.262 0.0054667000000000006 454270.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QEHLAES(ph)PVALGPER ddPTM_A549_MK2206_60min_R1 1 QEHLAESPVALGPER 15 0 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 QEHLAES(1)PVALGPER 99.059 3.2517e-06 15488000.0 472.45 565.29 448.29 418.06 481.84 475.86 408.88 536.0 596.06 604.45 707.57 True False 552.188009706489 594.0608464511902 511.86426288621027 520.4847187674262 410.9619742895882 526.2151893496966 483.1682033715532 611.9796414311561 461.0533617122285 467.9043251912433 531.8608410614538 1.0382189608177723 1.1169478942379016 0.9624026124289661 0.9786107165338139 0.7726870311967631 0.9893850961080535 0.9084485377928502 1.1506386524148051 0.8668684101504591 0.8797495304550524 1.0 9.054905010364495 -5.846680874857838 5.825587738817986 0.9442749834238588 1.0768440392363876 0.23607404798030285 0.09196554737448437 0.20210145545511762 10.660512125019673 0.012439206132645904 0.04019361296172332 1.4233743166016716e-06 5.846680874857838 0.13256905581252876 QEIESETTS(ph)EEQIQEEK ddPTM_A549_MK2206_60min_R1 2 QEIESETTSEEQIQEEK 17 0 D6RGZ6;P13611-2;P13611-5;P13611 D6RGZ6 VCAN Versican core protein 1 QEIESETT(0.019)S(0.981)EEQIQEEK;QEIESETT(0.09)S(0.91)EEQIQEEK 200.58 2.9834e-48 11809700.0 3118.9 3225.0 3260.2 2401.2 4186.4 3431.3999999999996 3620.8999999999996 3310.8 4045.5 4763.799999999999 2975.0 True False 3645.294070216044 3389.1387249112668 3722.545383259997 2989.4941077939648 3570.5861056905455 3794.508470421025 4278.770660311232 3780.1160388997596 3129.2007093360075 3687.6542713972112 2236.2253941770064 1.630110309858821 1.5155622209354995 1.6646557153645052 1.336848296052099 1.5967022443212264 1.6968363208385397 1.913389710828295 1.6904002828797802 1.399322589522619 1.6490530341886094 1.0 11.126849892643413 -9.658990673715792 0.8870494165472748 1.0601281096027355 1.6222179403575943 0.014547881761123205 0.22726639478124347 0.21017342824457874 0.34743083671685066 0.05322824812916962 0.03316984677335483 2.1928520253837767e-10 9.658990673715792 0.5620898307548587 QEIESETTS(ph)EEQIQEEK ddPTM_A549_PD325901_60min_R1 2 QEIESETTSEEQIQEEK 17 0 D6RGZ6;P13611-2;P13611-5;P13611 D6RGZ6 VCAN Versican core protein 1 QEIESET(0.013)T(0.132)S(0.855)EEQIQEEK;QEIESETT(0.121)S(0.879)EEQIQEEK 189.42 1.5123e-39 8980700.0 2274.3 2927.6000000000004 2531.5 2417.7 2804.3 2416.2 2731.5 2719.5 3227.1 2333.3 2939.8 True False 2505.1852617488294 3174.319126413092 2703.302813146146 2567.0358380049124 2607.335642309802 2396.523268288557 2835.448727234151 2665.257439093522 3091.476209542546 2185.97503979653 2578.223236927626 0.9716711981597709 1.231204141265832 1.0485138658386977 0.9956608106069025 1.0112916542544501 0.9295251217828623 1.0997685098102874 1.03375743454613 1.1990723554359646 0.8478610418551172 1.0 11.33216147034188 QEILAALEK ddPTM_A549_MK2206_60min_R1 1 QEILAALEK 9 0 Q5BJH1;C9JIZ6;P07602;P07602-2;P07602-3 Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D 0 84.17 0.0038077 675900.0 1059.4 1078.7 1086.5 1242.6 1597.5 1295.8 1194.7 1452.5 1762.3 1370.3 1666.2 False True 1238.200820156747 1133.6012224997783 1240.582037578058 1547.0370557824344 1362.509866195454 1432.9206959175735 1411.761525552716 1658.3963230946908 1363.1418638148182 1060.7482782853176 1252.4365552194051 0.9886335679014382 0.9051166845742465 0.9905348358031034 1.2352218955405851 1.0878873349051728 1.144106413970447 1.1272120089990505 1.3241359941016482 1.0883919493838308 0.8469477147283464 1.0 10.290521807213386 -6.014944859912923 24.26564329880104 1.0906180119951947 0.947112744874483 0.2309351256459512 0.11705785613491827 472.28403783115175 766842.9779851565 0.01459151534556967 0.04018911330909509 9.66173541177657e-07 6.014944859912923 -0.14350526712071165 QEIQHLFR ddPTM_A549_PD325901_60min_R1 1 QEIQHLFR 8 0 H0Y5M1;P04844-2;P04844 H0Y5M1 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 0 81.594 0.016214 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QEKPAEKPAET(ph)PVATS(ph)PTATDSTSGDSSR ddPTM_A549_MK2206_60min_R1 2 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 2 QEKPAEKPAET(0.997)PVAT(0.154)S(0.848)PTATDSTSGDSSR;QEKPAEKPAET(0.999)PVAT(0.156)S(0.842)PT(0.003)ATDSTSGDSSR 158.6 4.9648e-46 35768000.0 3372.2 3447.5 3331.1 2396.8999999999996 3609.8 2466.42 2319.8 2275.12 3940.8 3476.8 4070.5 True False 3941.3449176256163 3622.9630245369267 3803.5000693753072 2984.1406076009303 3078.8032018731433 2727.4149273229086 2741.277632022425 2597.625227262783 3048.2150921644657 2691.388465257531 3059.682509915126 1.288154867328031 1.1840977005935907 1.2431028569303468 0.9753105421659284 1.006249240532655 0.8914045553695588 0.8959353211122767 0.8489852194941755 0.9962520889950185 0.8796299800831913 1.0 11.579166243091567 -6.263339403039816 23.574964698853204 0.9719422527910738 1.233016423327109 0.8108357464253756 0.06324908170426255 25.95312490378885 322027.29133480054 0.008989760148211914 0.02193750030172501 5.453315155495635e-07 6.263339403039816 0.2610741705360352 QEKPAEKPAET(ph)PVATS(ph)PTATDSTSGDSSR ddPTM_A549_PD325901_60min_R1 2 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 2 QEKPAEKPAET(0.983)PVAT(0.178)S(0.809)PT(0.028)AT(0.001)DSTSGDSSR;QEKPAEKPAET(0.999)PVAT(0.193)S(0.808)PT(0.001)ATDSTSGDSSR 123.9 2.9869000000000002e-21 30253000.0 4615.3 4747.700000000001 4813.4 4572.2 5802.7 5918.2 5635.6 6145.6 5710.4 6327.5 6004.9 True False 5083.841858395716 5147.805341054603 5140.066269325566 4854.614409780397 5395.138370228254 5870.004141372955 5850.06584191865 6023.021186870064 5470.4117464509145 5927.980570142094 5266.335368197395 0.965347153752545 0.9774928828386856 0.9760233463986459 0.9218202165962847 1.0244578047210364 1.1146278637743097 1.1108418725564488 1.1436835609145177 1.0387511170454329 1.125636738962785 1.0 12.362583681972627 -6.91956132438245 6.9209125024527856 1.0439310152890091 0.9630279275791459 0.47916239952211714 0.05235906473923369 0.21241529722749664 15.202627073952145 0.008273819056181204 0.015714734543785455 1.2034794409489794e-07 6.91956132438245 -0.08090308770986321 QEKPAEKPAET(ph)PVATSPTATDSTSGDSSR ddPTM_A549_MK2206_60min_R1 2 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAET(0.659)PVAT(0.339)S(0.002)PTATDSTSGDSSR;QEKPAEKPAET(0.938)PVAT(0.06)S(0.002)PTATDSTSGDSSR 142.56 5.5787e-36 26213000.0 2629.0 2499.3 2672.9 2343.3999999999996 3053.8 2793.0 2228.8 2115.19 3056.3 3899.2 3348.0 True False 3072.7109271210934 2626.503694626583 3051.95741209608 2917.5331051992225 2604.5900653444 3088.55340615665 2633.7441099455027 2415.0246599977 2364.052929908204 3018.368011887989 2516.5991999007106 1.220977471200946 1.043671830909828 1.212730820313577 1.1593157564837222 1.034964195111864 1.2272726647447496 1.0465488942575416 0.959638173648383 0.9393839630885502 1.1993836809640068 1.0 11.297259752111088 -7.992643342127724 4.967263737495446 0.9707163044071686 1.1433336931823266 0.22993989352917854 0.09257082798221132 0.0839093447016332 5.891681765987156 0.009280338997840656 0.012613537059589328 1.0170836147542665e-08 7.992643342127724 0.17261738877515798 QEKPAEKPAET(ph)PVATSPTATDSTSGDSSR ddPTM_A549_PD325901_60min_R1 2 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAET(0.961)PVAT(0.033)S(0.005)PTATDSTSGDSSR;QEKPAEKPAET(0.999)PVAT(0.001)SPTATDSTSGDSSR 155.89 4.539e-46 33759000.0 2328.0 2607.5 2225.9300000000003 1802.1999999999998 2850.3999999999996 1837.63 2352.29 2195.0 2961.0 2995.8 2617.8 True False 2564.336846216978 2827.2431760220447 2376.994995404467 1913.5178009068334 2650.1977373461696 1822.6649505442838 2441.8076831724793 2151.2190030558104 2836.5594671548683 2806.644676733575 2295.827195601449 1.1169555143914853 1.2314703743551474 1.035354490075963 0.8334764064877886 1.1543541876425434 0.7939033713148395 1.0635851373529823 0.9370125971054389 1.2355282978568258 1.2224982272667542 1.0 11.164798340686568 -8.74456150420229 24.997632566183974 1.1112217208950415 1.0203493603868534 0.136636501367707 0.13728067616757794 502.4345773328809 744149.9555400879 0.024512742325680972 0.02775901801639714 1.8006881053485237e-09 8.74456150420229 -0.09087236050818803 QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR ddPTM_A549_MK2206_60min_R1 1 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAET(0.001)PVAT(0.499)S(0.499)PT(0.001)ATDSTSGDSSR 98.243 1.9195e-10 5649900.0 371.83 503.72 322.08 236.81 456.67 451.46 286.82 344.3 743.36 360.12 454.72 True False 434.5858136293021 529.3571964379231 367.7557870806637 294.8284606308048 389.4944479470908 499.23319754510584 338.9314813417848 393.1055793745281 574.9901469019933 278.76864188579776 341.800474366443 1.2714605339119112 1.5487316026086064 1.075937029526747 0.8625747555713463 1.1395374704176546 1.4605983168118128 0.9916062345145187 1.1501024979651757 1.682239171750091 0.8155888092388396 1.0 8.4170105890288 QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR ddPTM_A549_PD325901_60min_R1 2 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAETPVAT(0.637)S(0.362)PT(0.001)ATDSTSGDSSR;QEKPAEKPAET(0.008)PVAT(0.357)S(0.357)PT(0.057)AT(0.057)DS(0.053)T(0.053)S(0.053)GDS(0.003)S(0.003)R 260.6 1.3203999999999996e-138 261464900.0 9429.689999999999 10133.96 9415.38 8441.42 11602.85 7791.3 11291.33 12787.21 11852.0 13979.98 13705.54 True False 10386.985187029124 10987.984374335718 10054.364306079395 8962.827341544205 10787.90584365949 7727.850235997283 11721.027742002858 12532.159065177815 11353.901656440223 13097.281676961693 12019.845466576324 0.8641529723416406 0.9141535475551736 0.8364803303035503 0.7456690991965919 0.8975078651100384 0.6429242586758852 0.9751396367445496 1.0426223115784712 0.9445963084976512 1.089638108358498 1.0 13.553130727675326 -7.939044880306751 24.99999925387677 0.9797236315809711 0.821438720681542 0.5758885669110747 0.08074891285910672 40.744457696235 16710.601353317677 0.011017267689999435 0.015222542289979006 1.1506814705422365e-08 7.939044880306751 -0.1582849108994291 QEKPAEKPAETPVATS(ph)PTATDSTS(ph)GDSSR ddPTM_A549_PD325901_60min_R1 1 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 2 QEKPAEKPAET(0.002)PVAT(0.298)S(0.7)PT(0.001)AT(0.006)DS(0.055)T(0.216)S(0.691)GDS(0.017)S(0.015)R 104.88 5.3341000000000004e-15 5868100.0 1010.3 1219.4 1274.9 1094.6 1476.3 1257.3 1363.5 1420.1 1358.1 1248.2 1237.2 True False 1112.8649122564489 1322.1631174846725 1361.4223805964934 1162.2109559830324 1372.6097809585135 1247.0609656564857 1415.3887386358297 1391.7749914531016 1301.0237799199685 1169.3884389808547 1085.0322432569765 1.0256514672005748 1.2185473064983696 1.2547298838879366 1.0711303403246213 1.2650405455586335 1.1493307903119472 1.304466984674309 1.282703809128626 1.1990646250425179 1.0777453354479711 1.0 10.083522199678177 -10.484104693975564 0.8882023208223262 1.0042020552516822 1.2001314250805046 0.3240928998634698 0.08536849964248633 0.40026042832005015 0.584632963368592 0.0477759517587168 0.015015672808914901 3.280162097673949e-11 10.484104693975564 0.19592936982882247 QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR ddPTM_A549_MK2206_60min_R1 8 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAETPVAT(0.006)S(0.993)PT(0.001)ATDSTSGDSSR;QEKPAEKPAETPVAT(0.041)S(0.932)PT(0.026)AT(0.001)DSTSGDSSR;QEKPAEKPAETPVAT(0.024)S(0.969)PT(0.006)ATDSTSGDSSR;QEKPAEKPAETPVAT(0.013)S(0.982)PT(0.005)ATDSTSGDSSR;QEKPAEKPAETPVAT(0.023)S(0.953)PT(0.023)ATDSTSGDSSR;QEKPAEKPAET(0.028)PVAT(0.039)S(0.896)PT(0.034)AT(0.002)DSTSGDSSR;QEKPAEKPAET(0.001)PVAT(0.148)S(0.848)PT(0.003)ATDSTSGDSSR;QEKPAEKPAET(0.003)PVAT(0.325)S(0.657)PT(0.014)AT(0.001)DSTSGDSSR 284.8 2.184199999999999e-168 4933547000.0 20361.499999999996 24740.879999999997 21963.550000000003 20919.85 27083.43 17881.800000000003 17747.27 18673.920000000002 31572.81 27867.92 28341.76 True False 23798.023409119865 26000.085115157406 25078.311653426183 26045.21418912774 23099.493324202766 19774.040207021837 20971.719234616194 21321.00534648153 24421.618946417264 21572.537516888995 21303.71879921685 1.1170830611036187 1.2204481931160864 1.1771799979986635 1.222566559134511 1.0842939461373255 0.928196639910059 0.9844158868350786 1.0008114333195814 1.146354736306181 1.0126183940093139 1.0 14.378817670324171 -6.891401123842836 5.441598821782734 1.0476340009371201 1.1855820077585353 0.6061046944772084 0.061220314978689024 0.15743567163798897 7.010424389186314 0.011007076192502557 0.02109173410256495 1.2841000892453408e-07 6.891401123842836 0.13794800682141517 QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR ddPTM_A549_PD325901_60min_R1 5 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 H0Y579;P54727-2;P54727 H0Y579 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAETPVAT(0.005)S(0.991)PT(0.004)ATDSTSGDSSR;QEKPAEKPAETPVAT(0.028)S(0.971)PT(0.001)ATDSTSGDSSR;QEKPAEKPAETPVAT(0.018)S(0.98)PT(0.002)ATDSTSGDSSR;QEKPAEKPAETPVAT(0.071)S(0.921)PT(0.007)ATDSTSGDSSR;QEKPAEKPAETPVAT(0.001)S(0.995)PT(0.004)ATDSTSGDSSR 238.91 1.0961999999999998e-120 5712559000.0 20175.600000000002 21236.399999999998 21556.0 21152.699999999997 27651.0 22647.8 23657.100000000002 27024.1 27983.600000000002 32553.600000000002 29089.899999999998 True False 22223.81205950828 23026.065957152277 23018.91978675819 22459.25423773275 25708.88915077145 22463.363825654167 24557.38388616183 26485.083125503676 26807.546607590335 30498.16014036786 25512.02671606945 0.871111194216099 0.9025573002653168 0.9022771903989538 0.8803398682389343 1.0077164561205951 0.8805009525764177 0.9625806745762653 1.0381410861733427 1.0507807516015522 1.1954424664018464 1.0 14.638889893036234 -8.04068397532382 3.6439976925288766 1.0254787551023783 0.9104008368395992 0.5625191278150332 0.06284050871364269 0.10396799326324899 2.8617589971234314 0.006080783292965154 0.008161105609452294 9.105756335597515e-09 8.04068397532382 -0.11507791826277913 QEKPSS(ph)PSPMPSSTPSPSLNLGNTEEAIR ddPTM_A549_MK2206_60min_R1 2 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.26)S(0.688)PS(0.052)PMPSSTPSPSLNLGNTEEAIR;QEKPS(0.182)S(0.637)PS(0.182)PMPSSTPSPSLNLGNTEEAIR 138.13 2.2621e-28 36701000.0 2599.3 3953.1 2677.1 2004.8 3377.2 3176.2 2015.3999999999999 2942.02 3698.6000000000004 3603.1 3761.9 True False 3037.998293216379 4154.29590494472 3056.7530352510066 2495.9760899988923 2880.418353749787 3512.3033758090764 2381.5720922398455 3359.0603445583793 2860.87300545054 2789.157207538369 2827.7164068418415 1.0743645599911458 1.4691345620420542 1.080997029212334 0.8826826070534223 1.0186376352241087 1.2420988778474507 0.8422245195725706 1.1879056670714634 1.011725574222533 0.9863638378975431 1.0 11.465421723423765 -5.979933267451195 23.731788032671087 1.0170043872717467 1.2725790270591235 0.3253943003924754 0.1373934956203069 94.20731114479607 111410.94728119542 0.0164356410746657 0.05108899362834244 1.0472894594341322e-06 5.979933267451195 0.2555746397873768 QEKPSS(ph)PSPMPSSTPSPSLNLGNTEEAIR ddPTM_A549_PD325901_60min_R1 2 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.174)S(0.797)PS(0.03)PMPSSTPSPSLNLGNTEEAIR;QEKPS(0.166)S(0.664)PS(0.166)PMPS(0.005)STPSPSLNLGNTEEAIR 135.15 5.0379e-28 40023000.0 2838.0 3487.5 3171.1 2653.2 3758.4 3040.0 3365.0 3427.2 3116.0 3736.0 3679.5 True False 3126.1116707748247 3781.4038643823146 3386.309915373395 2817.0821381456053 3494.422949776118 3015.2432479087856 3493.056916398656 3358.8418074136107 2985.045356181888 3500.10832241025 3226.9448262722667 0.968752748830254 1.1718216666104433 1.0493857495807344 0.872987388941468 1.0828889670892945 0.9343956622251777 1.0824656461306155 1.0408736400038516 0.9250376182074924 1.0846508108580024 1.0 11.655953195755034 -6.1509934332581775 0.4850636168252142 0.9727741758333532 1.0872994724474732 0.0 0.08720724673635573 3.5276959362057108 0.9213017988775042 0.017394383875553344 0.19682803464009813 7.063282342054502e-07 6.1509934332581775 0.11452529661411992 QEKPSSPS(ph)PMPSSTPSPSLNLGNTEEAIR ddPTM_A549_MK2206_60min_R1 6 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.179)S(0.148)PS(0.669)PMPS(0.003)S(0.001)TPSPSLNLGNTEEAIR;QEKPS(0.14)S(0.146)PS(0.536)PMPS(0.122)S(0.037)T(0.012)PS(0.005)PS(0.002)LNLGNT(0.001)EEAIR;QEKPS(0.17)S(0.137)PS(0.687)PMPS(0.005)S(0.001)TPSPSLNLGNTEEAIR;QEKPS(0.158)S(0.145)PS(0.563)PMPS(0.094)S(0.017)T(0.017)PS(0.004)PS(0.001)LNLGNTEEAIR;QEKPS(0.008)S(0.03)PS(0.943)PMPS(0.014)S(0.005)TPSPSLNLGNTEEAIR;QEKPS(0.005)S(0.027)PS(0.949)PMPS(0.007)S(0.012)TPSPSLNLGNTEEAIR 142.72 4.4384999999999995e-36 148959300.0 5889.62 7663.080000000001 6434.289999999999 6234.3 8852.95 6985.53 6733.709999999999 6893.99 9893.71 10325.0 10437.2 True False 6883.643868615795 8053.0980403389185 7346.769073693621 7761.703779868366 7550.692782431953 7724.734147980474 7957.1379444459535 7871.234194458912 7652.80048200834 7992.575328976068 7845.355187934207 0.8774164717491084 1.0264797255737013 0.9364482420110962 0.9893374606933676 0.9624411644286761 0.9846251652010297 1.0142482722367578 1.003298640521019 0.9754562156443845 1.0187652614209588 1.0 12.937623049417136 -5.248413977310355 24.691776997539606 0.987488231551892 0.8774163875685769 0.6237230062764475 0.02524430827784945 800.4127002618341 1517283.231667745 0.00300858136893984 0.07560738920594327 5.64398723304541e-06 5.248413977310355 -0.11007184398331515 QEKPSSPS(ph)PMPSSTPSPSLNLGNTEEAIR ddPTM_A549_PD325901_60min_R1 3 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.012)S(0.076)PS(0.876)PMPS(0.035)S(0.001)TPSPSLNLGNTEEAIR;QEKPS(0.007)S(0.038)PS(0.83)PMPS(0.103)S(0.022)T(0.001)PSPSLNLGNTEEAIR;QEKPS(0.006)S(0.036)PS(0.955)PMPS(0.003)STPSPSLNLGNTEEAIR 169.35 1.4725999999999999e-57 191242000.0 7215.099999999999 7965.3 8711.4 7580.6 10506.0 7740.299999999999 7710.3 9069.400000000001 9293.2 8817.099999999999 8554.7 True False 7947.5716405241055 8636.563785222786 9302.607989903749 8048.836445208276 9768.094803732403 7677.2655630882855 8003.719685738054 8888.503702193344 8902.639121973538 8260.386801264298 7502.526132711328 1.059319421210992 1.1511541089563164 1.2399301015885822 1.0728168489963683 1.301974112578309 1.023290745981555 1.0668033065345153 1.1847347873190466 1.1866188753622142 1.1010140658156014 1.0 12.873160723672905 -10.85213315598771 1.0347391366605772 0.9977507149591287 1.1468594212148646 0.11037970738617864 0.0850934187321458 0.5169526255305651 0.9583326960741901 0.05750123675898406 0.013199826017209433 1.4056164918329102e-11 10.85213315598771 0.1491087062557359 QEKPVNGEDKGDSGVDTQNS(ph)EGNADEEDPLGPNCYYDK ddPTM_A549_MK2206_60min_R1 1 QEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDK 38 2 Q8ND56-2;Q8ND56;Q8ND56-3;A0A0G2JQ95;A0A096LP11;K7EMZ9;A0A140TA76 Q8ND56-2;K7EMZ9 LSM14A Protein LSM14 homolog A 1 QEKPVNGEDKGDSGVDT(0.018)QNS(0.981)EGNADEEDPLGPNCYYDK 105.92 8.4262e-15 15939000.0 617.65 640.37 759.87 440.59 827.72 856.25 655.76 663.86 1337.1 1128.1 1034.5 True False 721.8942199073196 672.9620977585823 867.6309920795572 548.534569778837 705.963484474054 946.85780666725 774.9031037050715 757.9641879859837 1034.2489849099436 873.2614265005236 777.6050992524745 0.9283558204560248 0.8654291212924307 1.115773279925281 0.7054153455348389 0.9078688979183768 1.2176589474239317 0.9965252342737974 0.9747417920929635 1.3300439849278065 1.1230140174492236 1.0 9.602893869420754 -7.246494403769975 23.063531608492514 1.1349757603925823 0.903063561221634 0.35501663194475386 0.13296702513375808 264.1805646586023 407689.97540114383 0.023166368954698955 0.039990218762393295 5.668988764193042e-08 7.246494403769975 -0.2319121991709483 QEKPVNGEDKGDSGVDTQNS(ph)EGNADEEDPLGPNCYYDK ddPTM_A549_PD325901_60min_R1 1 QEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDK 38 2 Q8ND56-2;Q8ND56;Q8ND56-3;A0A0G2JQ95;A0A096LP11;K7EMZ9;A0A140TA76 Q8ND56-2;K7EMZ9 LSM14A Protein LSM14 homolog A 1 QEKPVNGEDKGDS(0.055)GVDT(0.198)QNS(0.747)EGNADEEDPLGPNCYYDK 56.655 0.00046527 9977900.0 863.8 1399.0 1625.1 1381.2 1416.9 614.94 1110.4 1018.5 1092.7 1128.1 1082.1 True False 951.4923401040493 1516.8986397909277 1735.3890585201673 1466.5135870672066 1317.3818320396383 609.9321325227069 1152.656879634195 998.1852185022072 1046.7776189666076 1056.8715734772497 949.0085599970699 1.0026172367791784 1.5984035378939165 1.8286337254171083 1.5453112320417157 1.388166437659641 0.6427045637234189 1.2145906035217995 1.0518189830714373 1.1030223151726255 1.1136586307298564 1.0 9.89027729009764 -7.021080674097818 20.488320593331416 1.0375802982641364 1.517838799735847 0.4969265485347695 0.22728381127396052 44.57522835866201 43323.36282912902 0.03151415536592714 0.055130659101102195 9.526191900225771e-08 7.021080674097818 0.48025850147171045 QEKT(ph)PKT(ph)PK ddPTM_A549_MK2206_60min_R1 1 QEKTPKTPK 9 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 2 QEKT(1)PKT(1)PK 40.577 0.028842000000000003 68551000.0 2130.1 2171.5 2060.8 1865.9 2795.5 2452.9 2299.2 2266.9 3291.3 2824.5 3753.7 True False 2489.608804055017 2282.0200747735867 2353.0524280173595 2323.0455837634345 2384.285653176456 2712.4642498967582 2716.934878673144 2588.2400170900905 2545.8258051260896 2186.443488299556 2821.552693150329 0.8823541768682375 0.8087816613574061 0.833956577784171 0.8233217084348335 0.8450260946622073 0.9613374424945539 0.9629218994452388 0.9173105373411476 0.902278313393331 0.7749079057100086 1.0 11.462273577160111 -7.234131482163275 6.37704448228196 0.9509918117724562 0.8354313057344106 0.23042506065620305 0.06052622041022342 0.08811683726696973 13.016361508961873 0.005866575499653794 0.01006820053477548 5.8326849366389374e-08 7.234131482163275 -0.11556050603804557 QEKT(ph)PKT(ph)PK ddPTM_A549_PD325901_60min_R1 3 QEKTPKTPK 9 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 2 QEKT(1)PKT(1)PK;QEKT(1)PKT(1)PK;QEKT(1)PKT(1)PK 72.089 0.0013533 282559000.0 18308.0 18812.2 20137.5 17063.7 22846.899999999998 16570.9 19441.1 22136.300000000003 21177.5 24268.5 23252.3 True False 20166.614682362742 20397.57011542165 21504.15184662475 18117.685994525542 21242.212561526172 16435.952084464385 20180.941699078125 21694.774130908587 20287.48332174004 22736.18276831188 20392.41450847414 0.9889272638108859 1.0002528198387381 1.054517199897473 0.8884522226142801 1.0416722626297585 0.8059836209015057 0.989629829792439 1.0638649053496458 0.9948544010474829 1.1149333375341002 1.0 14.315744983406777 -7.989048647645778 24.99982732332793 1.0036302181630539 0.9633301933667711 0.12633988452673905 0.07564419708588034 462.4580162715477 1055698.197810907 0.01003161161858532 0.013853180412995134 1.0255370439324979e-08 7.989048647645778 -0.04030002479628281 QEKT(ph)PKT(ph)PKGPSSVEDIK ddPTM_A549_MK2206_60min_R1 2 QEKTPKTPKGPSSVEDIK 18 3 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 2 QEKT(1)PKT(0.999)PKGPS(0.001)S(0.001)VEDIK;QEKT(0.981)PKT(0.764)PKGPS(0.122)S(0.133)VEDIK 120.67 7.6326e-11 73228000.0 7530.4 8096.6 7709.5 7251.2 9065.1 8169.0 7523.6 6814.1 7750.8 11840.7 11468.8 True False 8801.347419396227 8508.682356625288 8802.823026882685 9027.744325518737 7731.635798465353 9033.438157856666 8890.540732944182 7780.019542306051 5995.256175484249 9165.877646276705 8620.780437222607 1.0209455493604698 0.9869967595841665 1.02111671802637 1.047207313915449 0.8968603080391508 1.0478677915113457 1.0312918647779046 0.9024727632214901 0.695442392848572 1.0632306103865596 1.0 13.073602766730987 -8.40645227161549 4.931722514895759 0.8536797775145072 1.0054109177198152 0.0722425667249208 0.09890793716874241 0.22677801346550513 8.342040446771719 0.018666011024770505 0.02257546930275311 3.922362502050001e-09 8.40645227161549 0.15173114020530798 QEKT(ph)PKT(ph)PKGPSSVEDIK ddPTM_A549_PD325901_60min_R1 5 QEKTPKTPKGPSSVEDIK 18 3 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 2 QEKT(0.99)PKT(0.557)PKGPS(0.218)S(0.235)VEDIK;QEKT(1)PKT(0.998)PKGPS(0.001)S(0.001)VEDIK;QEKT(0.998)PKT(0.611)PKGPS(0.179)S(0.211)VEDIK;QEKT(1)PKT(0.991)PKGPS(0.006)S(0.003)VEDIK;QEKT(1)PKT(0.997)PKGPS(0.002)S(0.001)VEDIK 122.41 5.5901000000000004e-11 341100000.0 26350.1 26635.3 30208.5 24138.7 33962.0 27037.0 29406.9 32309.7 28898.500000000004 30297.300000000003 28911.5 True False 29025.142754081637 28879.95020759348 32258.630468467458 25629.69267603475 31576.62628253949 26816.819636088774 30525.99567157315 31665.2576870307 27683.996542240795 28384.323307430433 25355.568785098687 1.1447245770775032 1.1389983183720198 1.2722503187317833 1.010811190758898 1.2453527093068755 1.0576303715911455 1.2039168172600052 1.2488482492903168 1.0918310205098025 1.1194512553830671 1.0 14.630015017363082 -9.451452289402335 1.211917172790566 1.0215081596400757 1.1618137842819312 0.15409224181162195 0.0833589155568508 0.28992905930816554 0.88269399295654 0.018427409958951924 0.014402801110290757 3.5362886782449093e-10 9.451452289402335 0.14030562464185548 QELGS(ph)PEER ddPTM_A549_MK2206_60min_R1 2 QELGSPEER 9 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYF0 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 QELGS(1)PEER;QELGS(1)PEER 137.6 4.3568999999999996e-05 248760000.0 11636.0 12736.5 12639.900000000001 10325.4 14971.3 12318.7 11375.6 11669.7 17359.6 17084.6 15795.7 True False 13599.872327113373 13384.733448010033 14432.42788475186 12855.123463524818 12769.041602361182 13622.256657508742 13442.399271848568 13323.91571195739 13427.678317584818 13225.176994229983 11873.191750857732 1.1454268247736255 1.1273071073785281 1.2155474439894602 1.0827015795981019 1.0754514767639234 1.147312108096347 1.1321639163182449 1.1221848338291056 1.130924068215675 1.1138687281180801 1.0 13.535420191880407 -10.79104311274193 0.544149397133101 0.9724965652110068 1.1342331929824132 0.10012834664842496 0.048364823915304965 0.6768790035191058 0.2639280917981935 0.05689813382962768 0.007929586924202349 1.617919417585597e-11 10.79104311274193 0.1617366277714064 QELGS(ph)PEER ddPTM_A549_PD325901_60min_R1 2 QELGSPEER 9 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYF0 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 QELGS(1)PEER;QELGS(1)PEER 167.18 5.4569e-07 288320000.0 12565.3 13227.6 12941.099999999999 12173.2 15123.8 10675.099999999999 13668.8 12433.3 12743.599999999999 13844.1 13847.599999999999 True False 13840.920005915039 14342.336274266243 13819.360867156072 12925.110916656911 14061.556462277571 10588.165524918126 14188.973663854364 12185.308077764841 12208.03080906275 12969.98116335112 12144.432987168848 1.139692567000749 1.1809803133188335 1.1379173388956787 1.0642827812803517 1.1578602703917302 0.8718534275008977 1.1683520901178068 1.0033657471402064 1.0052367880790396 1.0679774985834662 1.0 13.568007512940618 -6.62085375504151 0.6115989466650437 1.0035830196547058 1.1845392823998373 0.29918088309776225 0.07653620362412986 0.7796935259569858 0.448316146208864 0.012830714623584758 0.07334419333542871 2.394121820760688e-07 6.62085375504151 0.18095626274513155 QEMQEVQSSR ddPTM_A549_MK2206_60min_R1 1 QEMQEVQSSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 58.676 0.029687 3570300.0 895.06 1086.8 920.74 817.4 1139.7 1274.0 1011.7 959.3 1147.3 1701.0 1558.0 False True 1046.1242458839884 1142.11347790188 1051.3147770636185 1017.6630366944809 972.0516397514602 1408.8138343872429 1195.5127943430844 1095.283712733038 887.4383818616243 1316.7429186041925 1171.1056013874875 0.8932791753745988 0.9752438008568497 0.8977113386000847 0.8689763207423712 0.8300290243679181 1.2029776244927242 1.0208411546547809 0.9352561472128406 0.7577782744871312 1.1243588255782901 1.0 10.193655457622414 -8.537883185739268 24.96162812684491 0.8835596101952279 0.9570789714025164 0.0 0.12923691825699857 531.9721967813156 884993.5759370505 0.02156104125736191 0.02445186609057522 2.898123004859189e-09 8.537883185739268 0.07351936120728852 QEMQEVQSSR ddPTM_A549_PD325901_60min_R1 1 QEMQEVQSSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 48.091 0.019334 5050100.0 511.52 625.62 433.08 537.14 735.29 428.32 576.88 500.9 672.07 663.67 637.87 False True 563.4491338388785 678.3431930135812 462.47141312160136 570.3179178665506 683.6457670127929 424.8319039290435 598.8334840808483 490.9091565515517 643.8252350863808 621.7657629373693 559.4160337910832 1.0072094823962474 1.2125916170413376 0.8267038933215733 1.0194879721297705 1.2220703836102487 0.7594203209550822 1.0704617814091573 0.8775385882752231 1.1508880621873998 1.1114550269926138 1.0 9.127777794213392 -8.790071401519628 24.99494685158276 1.071252660704594 1.003239452926249 0.0689687947703318 0.14011755975796922 543.384722544427 474357.2287081158 0.023650134376772738 0.02517975608408954 1.62154348060085e-09 8.790071401519628 -0.06801320777834508 QENEDS(ph)SDATTPVPR ddPTM_A549_MK2206_60min_R1 1 QENEDSSDATTPVPR 15 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QENEDS(0.977)S(0.023)DATTPVPR 114.69 1.0873e-06 2078100.0 392.16 265.49 471.87 496.58 635.63 838.2 675.47 580.22 745.68 706.1 1032.0 True False 458.3470206085236 279.0023070005246 538.7882614560131 618.2421222923234 542.1296690139695 926.8977676478703 798.1941555746995 662.4679618492269 576.7846706062725 546.5915195922524 775.7259182489648 0.590862068452146 0.35966608880403605 0.6945600872434586 0.7969852595461456 0.6988675462046069 1.1948779147925643 1.0289641441611903 0.8539974574326541 0.7435418322856098 0.7046193851896373 1.0 9.599403194984 -6.207578542390991 1.4447910789967593 0.9003504239048103 0.4705132953313863 0.5132878476941165 0.15182036478353728 0.2703336569475431 1.0285687407105917 0.023037145516179 0.09889670538580445 6.200424984934882e-07 6.207578542390991 -0.42983712857342404 QENEDS(ph)SDATTPVPR ddPTM_A549_PD325901_60min_R1 1 QENEDSSDATTPVPR 15 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QENEDS(0.761)S(0.136)DAT(0.052)T(0.052)PVPR 79.652 0.00043792 2355400.0 673.27 576.88 549.58 554.63 927.23 704.31 735.4 771.13 678.97 497.29 623.71 True False 741.6198747648223 625.4957021605358 586.877803693012 588.8882354438786 862.1045635698453 698.5743328732362 763.386049426321 755.7492072102178 650.4352520817769 465.8910245319575 546.9976240234474 1.3558009069762107 1.1435071647289705 1.0729074093160138 1.0765828032529725 1.5760663770870247 1.277106704294005 1.3955929896207337 1.3816316086554374 1.1891006898667908 0.851724036943873 1.0 9.095390756216625 -9.766262042945494 0.9882001938089685 1.0297003131987768 1.275133355527607 0.40450899135008767 0.15390990754614017 0.4196447628892927 0.8454487835220656 0.049047202912092774 0.0301060201188725 1.7129234584268274e-10 9.766262042945494 0.24543304232883023 QENEDSS(ph)DATTPVPR ddPTM_A549_MK2206_60min_R1 1 QENEDSSDATTPVPR 15 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QENEDS(0.395)S(0.565)DAT(0.02)T(0.02)PVPR 64.675 0.004018 1580200.0 378.53 336.94 273.77 419.66 521.41 319.33 405.77 579.42 587.87 509.72 705.47 True False 442.41660983002953 354.0888068128999 312.59470264863774 522.4767188392532 444.71127970765014 353.1212886459013 479.4931566280449 661.554559399329 454.7183836354862 394.5738979840857 530.2823290185053 0.83430388987107 0.6677363876489711 0.5894873080670374 0.9852802747666523 0.8386311505623093 0.6659118535959708 0.9042223932212383 1.2475515837455764 0.8575024260701282 0.7440826827369468 1.0 9.050616863084347 -7.94991259532879 8.495337892956396 0.9601477472545401 0.7660006512066254 0.281605474932652 0.1508410653177279 0.2678638621690854 41.37436514883395 0.022043797116698027 0.0304656410537769 1.1222442907503314e-08 7.94991259532879 -0.1941470960479147 QENEDSSDAT(ph)TPVPR ddPTM_A549_MK2206_60min_R1 1 QENEDSSDATTPVPR 15 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QENEDS(0.069)S(0.069)DAT(0.497)T(0.364)PVPR 58.486999999999995 0.0089193 1070000.0 305.92 344.45 227.4 248.29 321.55 277.48 134.39 278.38 486.7 499.56 370.53 True False 357.55181697409097 361.98103373509633 259.6487393881733 309.1210611461617 274.2504209547094 306.8427494236832 158.80692342766343 317.841217502995 376.4632271001939 386.7090490405121 278.51717489223745 1.2837693657938087 1.2996722154572777 0.9322539605991457 1.1098815046711765 0.984680463819946 1.1017013566305394 0.5701871832109034 1.1411907277386848 1.351669703119218 1.3884567412768558 1.0 8.121622484549603 -5.722912415903296 24.494551078573327 1.0959563361152054 1.2917215369817783 0.13650101849217022 0.20849394735892823 230.98029712536734 146847.98607028226 0.029656149223107553 0.11485244194248322 1.892725285755249e-06 5.722912415903296 0.1957652008665729 QENEDSSDAT(ph)TPVPR ddPTM_A549_PD325901_60min_R1 2 QENEDSSDATTPVPR 15 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QENEDS(0.045)S(0.045)DAT(0.455)T(0.455)PVPR;QENEDS(0.076)S(0.076)DAT(0.424)T(0.424)PVPR 83.729 0.00022378 3024600.0 453.62 636.61 510.52000000000004 543.76 919.49 643.24 187.2 660.13 751.86 727.48 758.1999999999999 True False 499.671168462606 690.2593588829893 545.1669572061513 577.3468202314394 854.9081944682957 638.0016667055426 194.3239984397706 646.9631892880328 720.2619388635798 681.5467886474868 664.9462066258001 0.7514460019226743 1.0380679700176623 0.8198662565089949 0.8682609427326843 1.2856802339040896 0.9594786169892077 0.2922401789850752 0.9729556809880604 1.0831882815280256 1.0249653007360169 1.0 9.377093822759557 -8.514585962715271 24.895830448647736 1.038693302239491 0.8672025367636556 0.1085138448062053 0.22617813152656477 660.124272242414 1981767.8814867465 0.038110310668693 0.044229168776486076 3.0578349295635553e-09 8.514585962715271 -0.17149076547583553 QENEDSSDATT(ph)PVPR ddPTM_A549_MK2206_60min_R1 1 QENEDSSDATTPVPR 15 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QENEDS(0.006)S(0.006)DAT(0.155)T(0.832)PVPR 58.831 0.0082431 1894800.0 176.55 240.97 154.51 281.77 353.25 173.59 201.88 161.4 230.34 442.12 451.66 True False 206.3473237669186 253.2343437339125 176.4218413494577 350.8036626491358 301.28739294744554 191.95917858028375 238.55898282295328 184.27894426676977 178.16835777739612 342.24478493432434 339.500356818147 0.6077970747979164 0.7459030267516249 0.5196514165785041 1.0332939438913267 0.8874435236862794 0.5654167211467954 0.702676677747167 0.5427945525414531 0.5247957894572459 1.0080837267503886 1.0 8.40726928053192 -10.972517741652815 1.2662498391923864 0.9984208899547121 0.6718801009119223 0.3918594415373592 0.1542506179844637 0.4048942562239878 1.163707053319514 0.11234469465047187 0.02647373285880555 1.0653253424642887e-11 10.972517741652815 -0.3265407890427898 QENGAS(ph)VILR ddPTM_A549_MK2206_60min_R1 2 QENGASVILR 10 0 P29692;E9PK01;P29692-2;P29692-4;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL12;E9PPR1;E9PK06;E9PMW7;H0YCK7;E9PIZ1;E9PK72 P29692 EEF1D Elongation factor 1-delta 1 QENGAS(1)VILR;QENGAS(1)VILR 85.845 0.0008052 5507400.0 1533.72 1611.6399999999999 1316.3600000000001 1119.1 1708.85 1178.69 1379.62 1558.22 1594.3899999999999 1930.8200000000002 2079.4 True False 1792.5744401461257 1693.6655921289887 1503.039641956974 1393.2795502383078 1457.4804286999063 1303.4181934489015 1630.2790959094657 1779.102456848613 1233.2632107176455 1494.646420987271 1563.0275914795525 1.1468603944792077 1.0835800988809001 0.9616206714138718 0.891397924024769 0.9324726170190406 0.8339060682960138 1.0430264345917613 1.1382412355014957 0.7890220348255311 0.9562508231684175 1.0 10.61012753052326 -5.715347765265772 2.451905519226547 0.9224786979117844 1.1411323502649955 0.3041106671082525 0.09303195745716208 0.27031661188943357 3.0817238228142667 0.015158597938609946 0.08298265063218149 1.9259820478579686e-06 5.715347765265772 0.2186536523532111 QENGAS(ph)VILR ddPTM_A549_PD325901_60min_R1 1 QENGASVILR 10 0 P29692;E9PK01;P29692-2;P29692-4;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL12;E9PPR1;E9PK06;E9PMW7;H0YCK7;E9PIZ1;E9PK72 P29692 EEF1D Elongation factor 1-delta 1 QENGAS(1)VILR 73.082 0.0018208999999999999 2332800.0 1271.8 1343.1 1412.4 1131.4 1379.7 1347.0 1299.7 1463.2 1500.1 1209.7 1183.1 True False 1400.9121997503237 1456.28775060986 1508.2539574511638 1201.284008404168 1282.794631706606 1336.0304785964258 1349.1607947231287 1434.0153281418054 1437.0560137382713 1133.3193355513072 1037.586200288821 1.350164641126075 1.4035342318589916 1.4536179808784355 1.1577679117838888 1.2363258410236462 1.2876332378211375 1.3002879127995133 1.3820686201711578 1.384999157986348 1.09226523563617 1.0 10.019015481905514 -10.767401895517546 0.9174181025885396 0.9911930677252342 1.3288521025207665 0.6282000049966439 0.0827606730235895 0.289580693676116 0.41456089104987204 0.06716066333312863 0.015375172713132797 1.7084336012352478e-11 10.767401895517546 0.3376590347955323 QENGDLS(ph)PFSGTSLR ddPTM_A549_MK2206_60min_R1 2 QENGDLSPFSGTSLR 15 0 P19174-2 P19174-2 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 QENGDLS(0.993)PFS(0.004)GT(0.001)S(0.001)LR;QENGDLS(1)PFSGTSLR 171.78 2.9338e-27 13284400.0 5601.2 6127.4 4859.5 5342.200000000001 7648.799999999999 7069.8 6154.3 6807.1 8674.6 8635.2 8007.4 True False 6546.545623807781 6439.258487758535 5548.650171753863 6651.039239820471 6523.671652304092 7817.921543446572 7272.456647450478 7772.027270869449 6709.81695048971 6684.502322593144 6018.941587002676 1.0876572781407974 1.069832360836246 0.9218647650170984 1.1050180739721331 1.0838569469408594 1.2988864288579607 1.2082617088616787 1.2912614549462305 1.114783530210513 1.1105777030678752 1.0 12.555294100313027 -4.8775475643214445 12.092443933349422 1.0919653437048737 0.957693491593304 0.0 0.1108008162473502 1659502.34648192 2447780.6215712153 0.01685849582043161 5916092.635930555 1.3257219155553174e-05 4.8775475643214445 -0.13427185211156978 QENKRPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 QENKRPSPR 9 2 Q9Y4B6-3;Q9Y4B6-2;Q9Y4B6 Q9Y4B6-3 VPRBP Protein VPRBP 1 QENKRPS(1)PR;QENKRPS(1)PR 60.301 0.0016737000000000002 183705000.0 5021.9 4606.2 4573.799999999999 5567.9 5049.700000000001 3592.5 4257.7 3889.4 5687.8 6415.6 5876.3 True False 5869.4739463329815 4840.6359053290735 5222.433615715161 6932.035749952525 4306.895819297142 3972.6559654915022 5031.268977438521 4440.734360787945 4399.522381550204 4966.311504172288 4417.052532370533 1.3288214037117114 1.0958972912036462 1.1823345041613977 1.5693804180844226 0.9750610362303587 0.899390699199918 1.1390557256375557 1.0053614550073513 0.9960312559808019 1.1243496580075718 1.0 12.108868275233446 -6.854918267839722 24.972222533866233 1.0005552346596502 1.272153336109621 0.5147757997683613 0.126536974254953 8.85890278531104 2361.6220855759598 0.016429273909402502 0.031048415834179534 1.396631175683607e-07 6.854918267839722 0.27159810144997065 QENKRPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QENKRPSPR 9 2 Q9Y4B6-3;Q9Y4B6-2;Q9Y4B6 Q9Y4B6-3 VPRBP Protein VPRBP 1 QENKRPS(1)PR;QENKRPS(1)PR 69.578 0.00081056 232060000.0 4120.0 4267.799999999999 4699.8 3963.0 5284.9 3875.7 5283.299999999999 5489.4 4635.1 5278.5 4893.9 True False 4538.259367016302 4627.4624838454 5018.756690193268 4207.785509373981 4913.706855915228 3844.1375841842373 5484.358872632691 5379.909610649007 4440.302865994437 4945.214609165556 4291.981324988133 1.0573809677582533 1.0781646362028836 1.169333300910191 0.9803829958150192 1.1448574641523666 0.8956557107561195 1.2778151761058407 1.25347926826403 1.0345578253434535 1.1521985383240756 1.0 12.067428083401996 -8.977010471430464 24.821233166468172 1.0152459939067537 1.1064204657290482 0.0 0.11238602129471331 216.42150831654976 233667.87562123357 0.0180605045277415 0.01860613757770797 1.0543614739960334e-09 8.977010471430464 0.09117447182229443 QEPCAQHNGSEPAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 QEPCAQHNGSEPASPK 16 0 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 QEPCAQHNGS(0.148)EPAS(0.852)PK 43.791000000000004 0.025365000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QEPCAQHNGSEPAS(ph)PKR ddPTM_A549_MK2206_60min_R1 4 QEPCAQHNGSEPASPKR 17 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 QEPCAQHNGS(0.036)EPAS(0.964)PKR;QEPCAQHNGS(0.064)EPAS(0.936)PKR;QEPCAQHNGS(0.054)EPAS(0.946)PKR;QEPCAQHNGS(0.003)EPAS(0.997)PKR 95.206 6.794100000000001e-07 60320700.0 2603.19 3242.5899999999997 3180.08 2830.8900000000003 4223.6 2860.3900000000003 2657.55 3130.79 5260.02 5843.8099999999995 5833.03 True False 3042.5448301150104 3407.6239807783027 3631.063162504586 3524.4581770834816 3602.314034969086 3163.0745712267894 3140.3924351156124 3574.5890701422586 4068.633868525915 4523.689262297688 4384.527667561785 0.6939276156528292 0.7771929473701477 0.8281537802505881 0.8038398761076619 0.8215968305138591 0.7214174048046913 0.7162441825488512 0.8152734664188059 0.9279526044793927 1.0317392442897482 1.0 12.098205718353926 -8.808104795784612 2.0927419393908004 0.9721059714252734 0.7699075847769427 0.8154521060190134 0.04601352689745161 0.09759881378487874 0.8360758558479088 0.00888769480019266 0.009450588865300912 1.5555902205085826e-09 8.808104795784612 -0.20219838664833079 QEPCAQHNGSEPAS(ph)PKR ddPTM_A549_PD325901_60min_R1 4 QEPCAQHNGSEPASPKR 17 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 QEPCAQHNGS(0.021)EPAS(0.979)PKR;QEPCAQHNGS(0.017)EPAS(0.983)PKR;QEPCAQHNGS(0.067)EPAS(0.933)PKR;QEPCAQHNGSEPAS(1)PKR 112.85 6.1296e-10 86588700.0 6220.05 6945.38 6228.18 5893.8 8314.6 6492.629999999999 7391.74 8067.77 6727.530000000001 8524.65 9064.8 True False 6851.504897041201 7530.69154741323 6650.8617478888345 6257.846640209021 7730.611179812818 6439.756173904612 7673.036710615334 7906.851998306875 6444.795309715772 7986.402144174128 7949.887066501653 0.8618367581485915 0.9472702548373572 0.8365982676550833 0.787161702784136 0.9724177356414538 0.8100437301857706 0.9651755611657832 0.994586706976491 0.8106775927512394 1.0045931567790867 1.0 12.956718650750242 -7.774227812669873 24.99656967543505 0.9196834068098019 0.8722469584937793 0.18332246678251074 0.07469536009527382 528.0606077132152 1032157.2590819743 0.013337378731252047 0.018492200686592533 1.6817916322961376e-08 7.774227812669873 -0.04743644831602256 QEPES(ph)EEEEEEK ddPTM_A549_MK2206_60min_R1 2 QEPESEEEEEEK 12 0 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEK;QEPES(1)EEEEEEK 99.531 0.00024821 9071600.0 2100.7799999999997 2217.19 1731.02 2023.73 2352.01 1450.92 1007.73 1684.0 1906.78 2394.46 2657.5 True False 2455.3403048601926 2330.035500615816 1976.5046651526645 2519.5439408486905 2006.0324446888076 1604.455391357253 1190.8214967315964 1922.7121570337063 1474.8973745019673 1853.549822975306 1997.5694067312252 1.2291639512431525 1.1664353152207265 0.9894548136812775 1.2613048299391068 1.0042366677868937 0.8032038265858032 0.596135229503854 0.9625258329221144 0.7383459966557328 0.927902588380351 1.0 10.964029915979213 -7.015333887420632 4.582578665629845 0.8537455366519288 1.1496132269161188 0.6003913416931222 0.12295385124823621 0.12755096475707786 6.843012143831234 0.020375310053229557 0.0375113140182821 9.653084604428766e-08 7.015333887420632 0.29586769026419 QEPES(ph)EEEEEEK ddPTM_A549_PD325901_60min_R1 2 QEPESEEEEEEK 12 0 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEK;QEPES(1)EEEEEEK 115.8 2.5518000000000002e-05 11218900.0 3207.4 3403.6000000000004 3624.3 2995.5 3648.7 3309.6 3287.5 2684.6000000000004 3802.9 3744.2 3091.8 True False 3533.012886836916 3690.4333169352385 3870.2667926863846 3180.525231725901 3392.4278993316625 3282.6477148943814 3412.6076114890275 2631.0535469720417 3643.0773379409825 3507.7905730108287 2711.5282005350136 1.302960037863451 1.3610160190135867 1.4273378355138402 1.1729640986578524 1.2511128959168856 1.210626433553846 1.258555087428441 0.9703212920495927 1.343551336557062 1.2936581564295382 1.0 11.404890459463097 -13.981279207074218 0.27557083433913826 1.4567356350391268e-17 1.2900261452621813 0.0 0.14019253700450576 19.37513526409153 0.4202673089068994 10.736277115801188 0.05100170290775423 1.0440487864867739e-14 13.981279207074218 1.2900261452621813 QEPES(ph)EEEEEEKQEK ddPTM_A549_MK2206_60min_R1 4 QEPESEEEEEEKQEK 15 1 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK 206.34 7.2065e-40 232708000.0 37781.2 39069.6 32368.6 33616.2 48042.0 34933.4 30252.3 36565.0 37815.5 50219.9 49399.3 True False 44157.74289834442 41058.07576024593 36958.95420299044 41852.17050908857 40975.085440852585 38630.029201085796 35748.75131788603 41748.200725616116 29250.349628944718 38875.18971076468 37132.09045867837 1.18920702693764 1.1057302525408985 0.9953372876789525 1.1271159256617356 1.1034952499227266 1.0403408136709775 0.9627454548423079 1.1243159275418302 0.7877377564157161 1.0469432027810575 1.0 15.180378917728168 -8.748286226542431 24.99955470267688 0.8997650464811933 1.075987637132494 0.2882410270802189 0.08752518772403448 160.21917225083442 304520.5746293502 0.015925751779567954 0.0180055452174632 1.7853105585237603e-09 8.748286226542431 0.17622259065130064 QEPES(ph)EEEEEEKQEK ddPTM_A549_PD325901_60min_R1 4 QEPESEEEEEEKQEK 15 1 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK 210.92 5.964099999999999e-46 319988000.0 62439.8 65923.4 66401.8 57618.2 78166.7 53144.0 60886.8 63464.9 66569.4 65264.8 68461.3 True False 68778.64253024876 71478.99627619238 70908.22545446105 61177.14535357346 72676.54065247563 52711.21288383706 63203.88049253537 62199.04278224912 63771.719619324314 61143.96938983953 60040.99411193738 1.1455280437565931 1.1905032109050455 1.180996858950459 1.0189229252186913 1.2104486564126697 0.8779203886192316 1.0526787810125406 1.0359429203701787 1.0621363047459134 1.018370370014957 1.0 15.873660243724721 -6.598312595104054 1.1991426569608552 1.0262273634719574 1.1749981073968558 0.4065224693896684 0.07375015035276114 0.3556233337317371 0.9808471788007899 0.010638925997029675 0.035726525515704224 2.521665083021813e-07 6.598312595104054 0.14877074392489842 QEPES(ph)EEEEEEKQEKEEK ddPTM_A549_MK2206_60min_R1 4 QEPESEEEEEEKQEKEEK 18 2 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK 261.82 7.757599999999998e-101 1743681000.0 62826.0 67595.5 60672.2 59585.2 80954.9 63426.7 54597.600000000006 65807.2 69261.8 88343.4 84608.3 True False 73429.49285177252 71035.82222627588 69276.43028103406 74183.57667488116 69046.5414503074 70138.47129476389 64517.27719721853 75135.57212609773 53574.112888366944 68386.56458284389 63597.72403971305 1.1545930921351857 1.1169554146610368 1.0892910293106557 1.1664501803328349 1.0856762956987562 1.1028456183583948 1.0144589003991915 1.1814191979445674 0.8423904109353513 1.0752989295676758 1.0 15.956687516515498 -8.759156933802595 24.999963938764925 0.9255732481243246 1.1103582238269663 0.39983531431248354 0.07095384361990618 28.789241622946886 315332.2965833467 0.011534193784407766 0.01277516793706125 1.7411775792014344e-09 8.759156933802595 0.18478497570264163 QEPES(ph)EEEEEEKQEKEEK ddPTM_A549_PD325901_60min_R1 4 QEPESEEEEEEKQEKEEK 18 2 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK 315.43 1.910999999999999e-173 2611450000.0 148327.0 157278.0 156705.0 137053.0 190593.0 121444.0 158188.0 156637.0 158893.0 163112.0 155218.0 True False 163385.04784743392 170532.36902718904 167339.9436437159 145518.4525400534 177206.40519015523 120455.00032862979 164207.93090379494 153512.7521556509 152215.27977529168 152813.08048313207 136127.17000797062 1.2002383347708416 1.2527430711826588 1.2292912842742392 1.0689890382025344 1.30177102175693 0.8848711122223198 1.2062832929985992 1.1277157392360564 1.118184413636007 1.1225759007124327 1.0 17.054595521614328 -2.000000040632363 0.032752282796314376 0.4720648175186882 2.1572127272557395 0.16571019164969858 0.10503920220507446 731.4346835888424 1.783615612405703 27.767002897178337 74.83716766996027 0.009999999064405315 2.000000040632363 1.6851479097370514 QEPES(ph)EEEEEEKQEKEEKR ddPTM_A549_MK2206_60min_R1 4 QEPESEEEEEEKQEKEEKR 19 3 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEKEEKR;QEPES(1)EEEEEEKQEKEEKR;QEPES(1)EEEEEEKQEKEEKR;QEPES(1)EEEEEEKQEKEEKR 127.28 3.8706999999999996e-17 114096000.0 8188.299999999999 9006.6 8366.8 8511.7 14463.5 9121.8 8868.599999999999 9048.7 14482.900000000001 12473.6 12773.599999999999 True False 9570.284855285523 9464.997469701024 9553.338050628707 10597.06688210474 12335.938309682597 10087.062821439216 10479.909822982185 10331.380935481542 11202.546274438871 9655.805096708562 9601.562586574586 0.9967424332230259 0.9857767820974771 0.9949774283601183 1.1036814879405277 1.2847844502863899 1.0505647107423413 1.0914796137074345 1.076010372512431 1.1667419936524568 1.0056493419320955 1.0 13.229053498043124 -6.2567855947691875 21.360432118909802 1.0950670927255017 0.9918265945588937 0.2830413109084864 0.07426282984680992 59.70098362031705 274006.7239558809 0.01154755618571674 0.029362988894418136 5.536233580213463e-07 6.2567855947691875 -0.10324049816660807 QEPES(ph)EEEEEEKQEKEEKR ddPTM_A549_PD325901_60min_R1 2 QEPESEEEEEEKQEKEEKR 19 3 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEKEEKR;QEPES(1)EEEEEEKQEKEEKR 151.33 5.846399999999999e-22 74065000.0 7799.2 7899.9 8629.8 8220.8 9392.4 8057.0 9612.8 9134.8 8237.3 10069.2 9654.3 True False 8590.96904253242 8565.652297701465 9215.470123203086 8728.580145208583 8732.710226020963 7991.386463289833 9978.620364325992 8952.599247888034 7891.1149269823745 9433.428993579582 8466.882303650043 1.0146555407802096 1.0116654502223141 1.0884136323981177 1.0309084066806649 1.0313961990774718 0.9438405042957517 1.1785471920430788 1.0573666819519387 0.9319977110796193 1.1141561504301134 1.0 13.047615119264114 -8.75042847782867 24.989456094961874 0.9678878074372592 1.045171747243445 0.0 0.07150108310240884 207.2597760154357 470379.89022925287 0.009768917125856768 0.01102477334281865 1.7765258129254456e-09 8.75042847782867 0.07728393980618575 QEPGGS(ph)HGSETEDTGR ddPTM_A549_MK2206_60min_R1 1 QEPGGSHGSETEDTGR 16 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 QEPGGS(0.476)HGS(0.476)ET(0.048)EDT(0.001)GR 46.746 0.027516000000000002 874310.0 0.0 0.0 0.0 136.41 0.0 0.0 0.0 0.0 0.0 187.64 138.6 True False 0.0 0.0 0.0 169.8304561236776 0.0 0.0 0.0 0.0 0.0 145.2519936783602 104.18179483459936 0.0 0.0 0.0 1.6301356335173827 0.0 0.0 0.0 0.0 0.0 1.3942166566525807 1.0 6.702959386810597 -10.79328501279271 1.025877090219831 1.0028496629845904 0.18299067801228544 0.37986895345094795 0.48245977741065854 0.5549042915994593 1.0310506951487466 0.32968509349991026 0.0815155823787919 1.6095889696400188e-11 10.79328501279271 -0.819858984972305 QEPGGS(ph)HGSETEDTGR ddPTM_A549_PD325901_60min_R1 1 QEPGGSHGSETEDTGR 16 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 QEPGGS(0.497)HGS(0.497)ET(0.006)EDTGR 45.013999999999996 0.046068 14114000.0 161.71 0.0 150.66 153.15 182.24 144.84 187.39 164.19 0.0 250.37 245.96 True False 178.12668015539 0.0 160.88469359217802 162.60972767111397 169.44009109386963 143.66047106154895 194.52122899374257 160.91510164543675 0.0 234.56159547158853 215.70847926890235 0.8257750495442376 0.0 0.7458431589590832 0.7538402209419156 0.7855050096693023 0.6659936204105436 0.9017783151271132 0.7459841272388734 0.0 1.087400904529042 1.0 7.752939078182037 QEPGGSHGS(ph)ETEDTGR ddPTM_A549_MK2206_60min_R1 2 QEPGGSHGSETEDTGR 16 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 QEPGGS(0.001)HGS(0.98)ET(0.017)EDT(0.002)GR;QEPGGS(0.002)HGS(0.797)ET(0.187)EDT(0.014)GR 73.688 0.0001778 128504000.0 586.74 634.1600000000001 663.47 353.13 1034.74 426.98 521.76 785.25 880.5699999999999 1166.08 1422.98 True False 685.7673675842639 666.436035283637 757.5600225236213 439.64686585260836 882.5311167117892 472.16274019361475 616.5570382291667 896.561592227268 681.1223009813394 902.6617181222679 1069.6147937499145 0.6411348941613484 0.6230617220122853 0.7082549969860885 0.41103289560092016 0.8250924742895178 0.44143250724710026 0.5764290488799308 0.8382097905396885 0.6367921470059547 0.8439128959292594 1.0 10.0628756091346 -10.955501256285824 0.4266310110889865 1.1363368370646567 0.6103686293817593 0.40627494129457464 0.13190748576189962 1.3181411629340345 0.26902493039478254 0.31133327369102254 0.03231597695401751 1.1078953605551912e-11 10.955501256285824 -0.5259682076828974 QEPGGSHGS(ph)ETEDTGR ddPTM_A549_PD325901_60min_R1 3 QEPGGSHGSETEDTGR 16 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 QEPGGS(0.048)HGS(0.933)ET(0.019)EDTGR;QEPGGSHGS(0.995)ET(0.004)EDTGR;QEPGGS(0.06)HGS(0.774)ET(0.164)EDT(0.002)GR 152.81 9.5105e-16 156732000.0 1374.96 1297.25 1102.79 1602.1200000000001 1631.79 895.01 1331.24 1453.6999999999998 1816.2599999999998 1502.94 1679.65 True False 1514.5449270079453 1406.5738101992713 1177.6319610149865 1701.0793137214828 1517.1786997698935 887.7213352996195 1381.9010666824806 1424.7048130944113 1739.9289084142858 1408.0441119066554 1473.0636981786138 1.0281598337401305 0.954862856194505 0.7994440175744489 1.154790058179291 1.0299477895258882 0.6026360817914748 0.9381135848987031 0.967171219313872 1.1811633879550767 0.9558609811969757 1.0 10.52460410136271 -8.588599785387208 7.06573975944226 1.0854305263309545 0.9274311548993589 0.09305693171182627 0.1440884306095563 0.2687439270561184 23.83779707472727 0.024746158418129896 0.02808370650003538 2.578696403865044e-09 8.588599785387208 -0.1579993714315956 QEPIES(ph)DEEEAEPPREVEPGQR ddPTM_A549_MK2206_60min_R1 4 QEPIESDEEEAEPPREVEPGQR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 QEPIES(1)DEEEAEPPREVEPGQR;QEPIES(1)DEEEAEPPREVEPGQR;QEPIES(1)DEEEAEPPREVEPGQR;QEPIES(1)DEEEAEPPREVEPGQR 150.18 8.2776e-28 329591900.0 3263.5699999999997 3834.3500000000004 3438.86 2734.87 4376.43 3002.55 3392.4500000000003 3174.6600000000003 5574.299999999999 4922.900000000001 5652.0 True False 3814.3808293741286 4029.5020371669816 3926.54205775028 3404.9132727729807 3732.662944421764 3320.2778480686175 4008.8142524159284 3624.677776988499 4311.729950327944 3810.8134708974617 4248.452412735613 0.8978283051823142 0.9484634981641121 0.9242287958739187 0.8014479019621477 0.8785935634426166 0.7815264302161887 0.9435940109388258 0.8531760332592592 1.0148942559419152 0.8969886209561303 1.0 12.052721689894685 -8.766289804969064 24.989556839823095 1.0070334080701757 0.8788143239407907 0.2670136308204727 0.060151637577500694 60.747419184479604 312971.9000867781 0.008577709677051279 0.009275296065073282 1.7128139642851714e-09 8.766289804969064 -0.12821908412938499 QEPIES(ph)DEEEAEPPREVEPGQR ddPTM_A549_PD325901_60min_R1 3 QEPIESDEEEAEPPREVEPGQR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 QEPIES(1)DEEEAEPPREVEPGQR;QEPIES(1)DEEEAEPPREVEPGQR;QEPIES(1)DEEEAEPPREVEPGQR 147.28 1.454e-27 375735100.0 2033.97 1982.35 2198.5699999999997 1824.74 2713.21 1924.73 2280.77 2450.91 2900.8 2875.4399999999996 2680.0 True False 2240.4571370704252 2149.4095915579287 2347.7781812754197 1937.4500455147793 2522.643489666363 1909.055637022197 2367.5659504352334 2402.0246773483013 2778.8894638037286 2693.8842276743403 2350.3769899197373 0.9532330969369022 0.9144956748539853 0.9988943013586913 0.8243145903078897 1.0732931357333058 0.8122338013049512 1.0073132780780343 1.0219742142005601 1.1823164861304334 1.1461498471214753 1.0 11.19867646182141 -8.227705870734301 2.6794953088421742 1.0855097183788234 0.933549687951934 0.4402455181174183 0.08310899687949762 0.22198567893814336 3.161650251958069 0.0147978233603654 0.019066364809199855 5.919624095238955e-09 8.227705870734301 -0.15196003042688933 QEPLEEDS(ph)PSSSSAGLDK ddPTM_A549_MK2206_60min_R1 1 QEPLEEDSPSSSSAGLDK 18 0 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 QEPLEEDS(0.789)PS(0.169)S(0.037)S(0.004)S(0.001)AGLDK 176.11 1.3283e-30 18332000.0 1609.4 1678.3 1553.3 1581.0 2151.6 1588.6 1410.2 1572.2 2512.3 1926.3 2154.7 True False 1881.0273739477702 1763.7183014011086 1773.5812967970528 1968.345070973786 1835.1024902072843 1756.7045975726644 1666.4150860755342 1795.0641646605675 1943.2680613187135 1491.1474921265483 1619.6285233052763 1.1613943239953821 1.0889647076613467 1.095054372824699 1.2153064993921336 1.1330391282948493 1.0846342678552292 1.0288872183324962 1.1083184439091434 1.199823313405821 0.9206725311823177 1.0 10.661447240339552 -7.228455635449962 7.520297383863256 1.0916572993058364 1.1379303173688973 0.14611047927993148 0.07651357279459317 0.5737119765385446 111.79358413043215 0.011696881525038415 0.02015453237466928 5.909413290107253e-08 7.228455635449962 0.04627301806306083 QEPLEEDS(ph)PSSSSAGLDK ddPTM_A549_PD325901_60min_R1 2 QEPLEEDSPSSSSAGLDK 18 0 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 QEPLEEDS(0.702)PS(0.252)S(0.042)S(0.003)S(0.001)AGLDK;QEPLEEDS(0.999)PS(0.001)SSSAGLDK 264.88 2.8979999999999995e-100 42528000.0 6129.3 7255.4 6406.5 4851.8 8218.3 5157.6 6071.2 7257.0 6199.9 7527.6 6550.2 True False 6751.542023847823 7866.838020828518 6841.283615414101 5151.484666762722 7641.074959595857 5115.598215596828 6302.242838288115 7112.25344199363 5939.339763733017 7052.306051331748 5744.5669251389 1.1752917342301787 1.3694397024782339 1.1909137284963711 0.8967577075687324 1.3301394272486609 0.8905106829220439 1.0970788434387908 1.2380834856096068 1.0339055739331313 1.2276479921349732 1.0 12.48798241887289 -2.000000000002187 0.19809635950113938 0.9949651442938992 2.3145890490736587 0.013674396158561586 0.15365401582579985 47.82265308777992 0.5289171259363598 0.10614994445520348 19.77958987863338 0.00999999999994964 2.000000000002187 1.3196239047797595 QEPLEEDSPS(ph)SSSAGLDK ddPTM_A549_MK2206_60min_R1 1 QEPLEEDSPSSSSAGLDK 18 0 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 QEPLEEDS(0.381)PS(0.6)S(0.017)S(0.001)S(0.001)AGLDK 238.94 2.0881999999999995e-74 12809000.0 2307.8 2146.2 1883.2 1557.3 3177.5 2522.7 1921.0 2241.4 2738.0 2452.7 2967.4 True False 2697.3002197071355 2255.432412838623 2150.266077466174 1938.8385699098526 2710.093959208796 2789.650439567266 2270.0208341732377 2559.125313999615 2117.8473716875524 1898.6333665258692 2230.512683926335 1.2092736522614713 1.0111721978054042 0.9640232458490646 0.8692344965718585 1.215009436502402 1.2506767881977205 1.017712587124749 1.1473260530824818 0.9494890510819873 0.8512094014115786 1.0 11.123159636757252 -8.776162988115203 24.997407904605385 0.9761476012849519 1.0793704753919302 0.2270258294727553 0.11756645285726812 340.44285095038316 577994.0890907472 0.01996357383085278 0.0212980110464085 1.6743143979467526e-09 8.776162988115203 0.10322287410697828 QEPLGS(ph)DSEGVNCLAYDEAIMAQQDR ddPTM_A549_MK2206_60min_R1 1 QEPLGSDSEGVNCLAYDEAIMAQQDR 26 0 F5H3F0;J3KR44;F5H6Q1;F5GYJ8;Q96FW1 F5H3F0 OTUB1 Ubiquitin thioesterase OTUB1 1 QEPLGS(0.75)DS(0.25)EGVNCLAYDEAIMAQQDR 56.211000000000006 0.00092187 2141900.0 792.1 1174.1 1197.9 979.09 1839.4 1028.3 969.46 1068.0 1418.0 1307.6 1591.5 True False 925.787115014309 1233.856675013431 1367.7802326873036 1218.9670939530197 1568.826696638447 1137.1140234697027 1145.5983331065004 1219.392270612827 1096.8252640806968 1012.212251832359 1196.2866268345235 0.7738840293350271 1.0314055572771226 1.1433549468880773 1.0189590576453325 1.3114137209655985 0.9505364332949232 0.9576286379944339 1.0193144713482611 0.9168582507546624 0.8461285356927871 1.0 10.224347381196667 QEPLGS(ph)DSEGVNCLAYDEAIMAQQDR ddPTM_A549_PD325901_60min_R1 1 QEPLGSDSEGVNCLAYDEAIMAQQDR 26 0 F5H3F0;J3KR44;F5H6Q1;F5GYJ8;Q96FW1 F5H3F0 OTUB1 Ubiquitin thioesterase OTUB1 1 QEPLGS(0.954)DS(0.046)EGVNCLAYDEAIMAQQDR 102.53 1.7708e-12 2897200.0 761.12 792.63 875.72 809.83 707.11 527.27 729.45 982.88 587.93 563.75 964.69 True False 838.3883420930703 859.4277118352271 935.151625332152 859.8513598426263 657.4450329970703 522.9760879358116 757.2096189203559 963.2756873455563 563.2213466816486 528.1547287898233 846.0392456737571 0.9909567982575159 1.015824876008923 1.1053288959277874 1.0163256187458178 0.7770857396497053 0.6181463692258521 0.8950053118603731 1.138570925960339 0.6657153903458912 0.624267410159228 1.0 9.724580777736575 -6.688981828163618 6.932432607704604 0.8447451499412362 1.0382333463474438 0.30437633678267684 0.15286874289089572 0.2562613816793911 20.08143597498926 0.02330482306097191 0.04863655762776488 2.0465302662610165e-07 6.688981828163618 0.19348819640620762 QEPPDPEEDKEENKDDS(ph)ASK ddPTM_A549_MK2206_60min_R1 1 QEPPDPEEDKEENKDDSASK 20 2 K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;Q9UIS9-6;Q9UIS9-5;Q9UIS9-10;Q9UIS9;Q9UIS9-9;Q9UIS9-12;K7EN65;Q9UIS9-8;Q9UIS9-2 K7EPZ6 MBD1 Methyl-CpG-binding domain protein 1 1 QEPPDPEEDKEENKDDS(0.767)AS(0.233)K 61.801 0.00046049 3567700.0 1280.1 1541.2 1043.5 1334.8 1857.4 1488.7 1246.3 1569.4 1885.1 1744.7 1623.3 True False 1496.149584559799 1619.640497002555 1191.4839909919033 1661.826059921449 1584.178920482902 1646.2332458809178 1472.7365776314984 1791.8672560859259 1458.1278598861215 1350.5710582532254 1220.1898091991704 1.2261613507014497 1.3273676642698322 0.9764743009728075 1.3619406156261307 1.2983053198277597 1.3491616086855915 1.20697334671077 1.4685151790129736 1.1950008505997223 1.1068532519048213 1.0 10.25288987137699 -9.889829722162334 0.9362073316393602 1.0245523873401179 1.270266705837049 0.3071415934128642 0.12211236665151608 0.3479372201071315 0.6244575386553458 0.042100231338803994 0.023146662131676748 1.2887547465922532e-10 9.889829722162334 0.24571431849693104 QEPQS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 QEPQSPSR 8 0 Q8WUQ7-2;Q8WUQ7;K7ENY9 Q8WUQ7-2 CACTIN Cactin 1 QEPQS(0.999)PS(0.001)R;QEPQS(1)PSR 115.42 0.001306 59934000.0 13743.7 14962.599999999999 14367.7 12188.5 13556.400000000001 11109.0 9082.1 11307.400000000001 15360.300000000001 20344.0 19853.8 True False 16063.300558795801 15724.132429568153 16405.255905485752 15174.683047162564 11562.271518054486 12284.547006442608 10732.20000939343 12910.258577460181 11881.216575358761 15748.276270478378 14923.553522995438 1.0763723622556884 1.053645326854567 1.0992861639962082 1.0168277296543458 0.7747666465790729 0.823165004736544 0.7191450744527015 0.8650927915772201 0.796138570954378 1.0552631614321708 1.0 13.865303483479627 -6.593797361472228 6.076420946592757 0.8710806651861729 1.0717823376160809 0.5286414449428553 0.09149939008296375 0.13674931859480358 8.865622221800587 0.01411419692884323 0.02971295460408497 2.548018861637214e-07 6.593797361472228 0.200701672429908 QEPQS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 QEPQSPSR 8 0 Q8WUQ7-2;Q8WUQ7;K7ENY9 Q8WUQ7-2 CACTIN Cactin 1 QEPQS(1)PSR;QEPQS(1)PSR 131.09 0.0010719000000000002 92010000.0 14018.800000000001 15970.4 16187.3 14056.2 17343.8 13745.6 16747.1 15729.2 16071.3 18556.9 18447.7 True False 15441.978255904885 17316.281656123665 17285.86752014246 14924.41955005363 16125.6313208618 13633.660390939156 17384.420054864757 15415.4687666813 15395.879150451223 17385.214167059647 16178.749849605334 0.9544605361632177 1.0703102413408092 1.0684303596278257 0.9224705053720635 0.9967167717384029 0.8426893621370712 1.0745218398496243 0.9528219986080907 0.9516111747550625 1.074570923505795 1.0 13.981812512938136 -6.253228436736312 24.93960821632246 0.9707752239576496 1.0349913634262309 0.10536284833614251 0.06831988855760053 729.6625217220994 2216243.3324045553 0.007824172428918788 0.020311887665600558 5.581765194361453e-07 6.253228436736312 0.06421613946858129 QEPS(ph)PKPNNK ddPTM_A549_MK2206_60min_R1 4 QEPSPKPNNK 10 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK 97.214 0.00041799 387050500.0 20517.6 22978.5 22372.7 19456.0 17938.5 14346.8 13697.000000000002 15628.1 17998.5 30491.8 29797.0 True False 23980.469272841277 24148.007500891028 25545.48527576865 24222.720873413025 15299.770412987258 15864.968853364911 16185.567603160258 17843.431034048972 13921.868487698464 23603.68120252519 22397.58254463606 1.0706722131752695 1.0781524056342489 1.1405465400053396 1.08148818405467 0.6830991863740831 0.7083339829978379 0.7226479719810877 0.7966677206564085 0.6215790681853107 1.0538495016364153 1.0 14.451055404730722 -6.745701374938118 23.447330962991128 0.7913138530568526 1.0950915087582307 0.5681581076099504 0.12349419560960316 74.84397322039176 111504.9394747207 0.020528450187840514 0.042592183169215946 1.7959681273108454e-07 6.745701374938118 0.30377765570137805 QEPS(ph)PKPNNK ddPTM_A549_PD325901_60min_R1 4 QEPSPKPNNK 10 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK 98.156 0.00041565 760424200.0 17832.6 17908.0 18829.9 16432.100000000002 23736.8 16919.8 19877.4 21329.2 20305.5 20512.0 20176.0 True False 19642.952424333726 19417.17000813146 20107.81024738719 17447.07349699324 22069.609055514495 16782.0107585418 20633.84533433065 20903.772373566284 19452.13044927836 19216.868819400188 17694.479906201712 1.1101175354382187 1.0973574872537488 1.136388882520341 0.9860178761670322 1.2472595505776551 0.9484319882530087 1.166117650459945 1.1813725232036774 1.0993332696069023 1.0860375055536329 1.0 14.111011736804494 -10.363661042832753 0.8873775448728726 1.0040251987449607 1.107027941755527 0.05086196337952387 0.08314293019866278 0.6460604100391263 0.9696565218538734 0.03870506051045592 0.013789317815539971 4.3285153021012404e-11 10.363661042832753 0.10300274301056644 QEPT(ph)SESSMEDSPTTER ddPTM_A549_PD325901_60min_R1 1 QEPTSESSMEDSPTTER 17 0 A0A0A0MTH9;O14981 A0A0A0MTH9 BTAF1 TATA-binding protein-associated factor 172 1 QEPT(0.248)S(0.248)ES(0.248)S(0.248)MEDS(0.008)PT(0.002)TER 44.299 0.025082 1611800.0 0.0 0.0 145.88 179.56 188.62 141.15 167.7 137.63 184.49 0.0 211.54 True False 0.0 0.0 155.78029404770297 190.65101338965223 175.37198190367468 140.00052119813336 174.08191526896115 134.88486168135367 176.73652688125696 0.0 185.52192106254515 0.0 0.0 0.8396867235715214 1.0276468263034961 0.945289812110944 0.7546306139797618 0.9383360967369069 0.727056193191746 0.9526449805447715 0.0 1.0 7.535445853923983 -5.785910569762433 5.007092305839169 0.9401208839585126 2.030446163229357e-16 0.4707434960036829 0.2981296924208747 0.028707082031348568 1.8340072675281394 0.013601948503583523 0.047894613172412136 1.6371536105894939e-06 5.785910569762433 -0.9401208839585123 QEPTSES(ph)SMEDSPTTER ddPTM_A549_PD325901_60min_R1 1 QEPTSESSMEDSPTTER 17 0 A0A0A0MTH9;O14981 A0A0A0MTH9 BTAF1 TATA-binding protein-associated factor 172 1 QEPT(0.058)S(0.058)ES(0.435)S(0.435)MEDS(0.011)PT(0.001)T(0.001)ER 48.004 0.008229 1642300.0 276.48 229.48 247.63 148.34 249.17 0.0 336.29 203.57 185.67 145.49 248.83 True False 304.54804606618166 248.81908496013003 264.4356609201584 157.50262489541657 231.66915878983474 0.0 349.08769997494915 199.50963665242438 177.86693558481747 136.30373657052127 218.22548746333126 1.395565887405133 1.1401925955231946 1.211754245546556 0.721742573364085 1.0616044967193048 0.0 1.5996651171811764 0.9142361828196088 0.8150603197287151 0.6246004449568457 1.0 7.7696757996377634 -6.1626927803249 6.663906779121185 0.8955276834100805 1.2440109452876802 0.18633181220594341 0.36692343316888565 0.3372432533860704 19.495986090734156 0.04555095704648401 0.12196599995275378 6.875546437966659e-07 6.1626927803249 0.3484832618775997 QEPTSESSMEDS(ph)PTTER ddPTM_A549_PD325901_60min_R1 1 QEPTSESSMEDSPTTER 17 0 A0A0A0MTH9;O14981 A0A0A0MTH9 BTAF1 TATA-binding protein-associated factor 172 1 QEPT(0.08)S(0.08)ES(0.08)S(0.08)MEDS(0.665)PT(0.006)T(0.007)ER 53.777 0.0048835 1527000.0 385.9 287.69 390.17 177.51 435.71 159.12 289.87 281.85 285.04 333.48 315.72 True False 425.0762839154347 311.93464594814265 416.6492824828095 188.47438954553996 405.10723271789885 157.82417947606788 300.9011614729503 276.2282806429523 273.06076005330107 312.4240158879472 276.8884415139773 1.5351897016400988 1.126571568833061 1.5047550566020182 0.6806870973558707 1.4630702188319735 0.569991938316793 1.086723446553694 0.99761578754456 0.9861760879589371 1.1283389591117188 1.0 8.113161020588596 -6.245179223317149 24.990720663373438 0.9868363595362513 1.3626120629566687 0.35478653507280666 0.23937011153903576 626.8089285817117 963359.9336764325 0.027848013295961076 0.07343315361998479 5.68618226789756e-07 6.245179223317149 0.37577570342041744 QEPVS(ph)PK ddPTM_A549_PD325901_60min_R1 1 QEPVSPK 7 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 QEPVS(1)PK 79.97399999999999 0.016078 67401000.0 18955.0 19138.0 18929.0 16729.0 20468.0 16692.0 17870.0 19283.0 18688.0 18358.0 20834.0 True False 20879.297646066527 20750.82642481685 20213.635769323882 17762.312335684393 19030.398290766683 16556.06588621496 18550.052628839207 18898.38543777914 17902.608349270587 17198.872747004123 18271.55007760739 1.1427217481485081 1.1356905318201724 1.1062901441567679 0.9721294723348574 1.0415316823113598 0.9061117319490681 1.0152424151234511 1.0343066328532227 0.9798078582950137 0.9412924833390091 1.0 14.157311410581958 -6.1573071244276685 3.8249887321987686 0.9917629425179815 1.1360106451791536 0.738972779563304 0.037663202994814154 0.07846722346474375 2.0619359428872475 0.004501448948432072 0.012820647680003888 6.961340478344699e-07 6.1573071244276685 0.14424770266117215 QEQINTEPLEDTVLS(ph)PTK ddPTM_A549_MK2206_60min_R1 4 QEQINTEPLEDTVLSPTK 18 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDTVLS(0.978)PT(0.022)K;QEQINTEPLEDT(0.003)VLS(0.972)PT(0.025)K;QEQINTEPLEDT(0.059)VLS(0.906)PT(0.036)K;QEQINTEPLEDTVLS(0.995)PT(0.004)K 332.07 1.7400999999999995e-195 283221000.0 14101.86 13819.509999999998 14164.16 11495.56 21144.6 15389.970000000001 13648.32 15885.210000000001 21442.9 19495.21 20301.07 True False 16481.909210624515 14522.864031100306 16172.850872877714 14311.972716055292 18034.25735008225 17018.52641036472 16128.043077284383 18136.987163915335 16586.117387275022 15091.228520988627 15259.754037971434 1.0800900964466364 0.9517102303852673 1.059836930047115 0.9378901311542938 1.1818183507549933 1.115255617359026 1.0569005920509826 1.188550426093656 1.086919051644158 0.9889562101352709 1.0 13.897444088048326 -6.72968931517994 24.999957260069888 1.0683236549526316 1.0071521800215957 0.19595520798525667 0.07195228421929516 326.42145212399197 257022.31441960213 0.010593327011626697 0.022050302769644464 1.8634197098627488e-07 6.72968931517994 -0.06117147493103592 QEQINTEPLEDTVLS(ph)PTK ddPTM_A549_PD325901_60min_R1 4 QEQINTEPLEDTVLSPTK 18 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDT(0.016)VLS(0.938)PT(0.046)K;QEQINTEPLEDTVLS(0.986)PT(0.014)K;QEQINTEPLEDTVLS(0.982)PT(0.018)K;QEQINTEPLEDT(0.007)VLS(0.988)PT(0.005)K 341.72 8.193799999999995e-197 440177000.0 40639.1 41877.509999999995 40633.16 36155.62 51355.31 36669.68 43726.36 43554.56 43107.0 46551.2 46550.9 True False 44764.75151507578 45406.674736834146 43390.77058464053 38388.87053202928 47748.29019180153 36371.05428387368 45390.39055778229 42685.83013290869 41295.362698630495 43611.94928752252 40825.43441046817 1.0964917376016339 1.1122153479202486 1.062836714690648 0.9403175027131094 1.1695721277997777 0.8908920335835463 1.1118164745393033 1.0455695266763283 1.0115106745328797 1.068254383995969 1.0 15.317180616677357 -2.0000000000159757 0.26612590373395717 1.0042270317021165 1.7441510077897138 0.061945522927155494 0.07493480999296095 57.045075465588525 0.7032917539814825 0.026833070293301342 19.616157132032875 0.009999999999632147 2.0000000000159757 0.7399239760875973 QEQINTEPLEDTVLS(ph)PTKK ddPTM_A549_MK2206_60min_R1 2 QEQINTEPLEDTVLSPTKK 19 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDTVLS(0.998)PT(0.002)KK;QEQINTEPLEDT(0.063)VLS(0.932)PT(0.005)KK 230.86 1.6270999999999998e-75 209162000.0 6327.4 7420.2 7066.799999999999 6528.4 9416.4 7828.9 6831.7 6182.8 9841.2 8816.900000000001 9305.0 True False 7395.310429922404 7797.856485763278 8068.978502675218 8127.858293071011 8031.260033829649 8657.349001596769 8072.931459042853 7059.230834030883 7612.183913167109 6825.156166397012 6994.311695064556 1.0573321224933123 1.1148854706126026 1.153648686884942 1.1620669263004575 1.1482559519754891 1.2377699735208703 1.1542138542008944 1.00928170516223 1.088339245524123 0.975815271603222 1.0 12.77196637450726 -9.195794817687835 0.6251910675175856 1.0144878982741765 1.1449012716700686 0.5129629313735161 0.05438761717626431 0.44081277684159337 0.38542661906959497 0.02098500721422146 0.015373442126813746 6.370964458623188e-10 9.195794817687835 0.1304133733958921 QEQINTEPLEDTVLS(ph)PTKK ddPTM_A549_PD325901_60min_R1 2 QEQINTEPLEDTVLSPTKK 19 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDT(0.008)VLS(0.989)PT(0.003)KK;QEQINTEPLEDT(0.276)VLS(0.705)PT(0.019)KK 240.18 1.7549e-85 238840000.0 15770.4 16086.7 16072.7 14235.099999999999 18451.5 14185.1 17772.9 17647.0 17558.1 18197.7 16466.2 True False 17371.39939844512 17442.382665278565 17163.49007499667 15114.36979674225 17155.53029421935 14069.581248654917 18449.257435204065 17295.016741196305 16820.194116937495 17048.694116361097 14440.96178784193 1.202925376692733 1.2078407879981774 1.188528183036041 1.0466317977149744 1.1879769883930344 0.9742828390073239 1.2775643136689676 1.1976360712869725 1.1647558080998925 1.1805788538762465 1.0 13.817879210440877 -10.586937423834875 0.8344598005556042 0.9978969858287505 1.1592823549316733 0.0 0.0947205234607196 0.5508554507672119 0.6733627942370218 0.055079288263764396 0.014485433003543154 2.5885858697133226e-11 10.586937423834875 0.16138536910292278 QEQINTEPLEDTVLS(ph)PTKKR ddPTM_A549_MK2206_60min_R1 2 QEQINTEPLEDTVLSPTKKR 20 2 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDT(0.019)VLS(0.856)PT(0.125)KKR;QEQINTEPLEDT(0.005)VLS(0.849)PT(0.146)KKR 143.31 1.4912e-21 11385100.0 1758.12 2396.9 2378.0 2139.8999999999996 2634.0 2175.02 1959.6000000000001 1644.31 3108.1000000000004 2764.46 3661.2 True False 2054.847674092863 2518.8919720123454 2715.2361577180154 2664.175596063762 2246.542089238701 2405.1791727385744 2315.6339545267465 1877.3959779881802 2404.1203126158066 2139.966565999146 2752.0229960204565 0.7466680609370856 0.9152873997255007 0.9866328012681448 0.968078973146763 0.8163238797376684 0.8739676871220069 0.8414297256510039 0.682187605518913 0.8735829301180505 0.7775976323939261 1.0 11.426276809973196 -10.29124233530465 1.030773133244705 0.9895110301047848 0.8615711500047333 0.0 0.10563583585502379 0.5092110913297412 1.0649724796817568 0.038015704621913206 0.016330672955772584 5.113963979175838e-11 10.29124233530465 -0.12793988010005153 QEQINTEPLEDTVLS(ph)PTKKR ddPTM_A549_PD325901_60min_R1 2 QEQINTEPLEDTVLSPTKKR 20 2 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDT(0.006)VLS(0.867)PT(0.127)KKR;QEQINTEPLEDT(0.025)VLS(0.84)PT(0.136)KKR 176.48 2.1346e-35 21164800.0 2545.29 2698.7 3419.3 3252.0 3004.3 5095.8 4483.2 4852.6 4462.2 3622.8999999999996 3980.7 True False 2803.685967056537 2926.128920088473 3651.3542599212415 3452.8686541721345 2793.288332272346 5054.3014943071075 4653.810629301172 4755.811086208943 4274.669251718491 3394.1494757120186 3491.099135736377 0.8030954888553046 0.8381683837434954 1.04590391677636 0.9890491561316896 0.800117161864313 1.4477679658446607 1.3330502653627867 1.3622675556607478 1.2244479705434763 0.9722294737975383 1.0 11.769465609929878 -7.234429464817339 24.982041158543858 1.1700966646964202 0.9056735403510212 0.510619314361531 0.15505445795730538 651.4488065650196 602539.1379394623 0.02571369919668849 0.04453030874227639 5.828684326716888e-08 7.234429464817339 -0.26442312434539894 QEQLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 QEQLSPK 7 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 QEQLS(1)PK 107.08 0.0093463 149550000.0 9796.5 10560.0 9177.3 8514.6 12398.0 10662.0 8755.2 10330.0 13808.0 14069.0 12316.0 True False 11449.90969857048 11097.45889459317 10478.779138025871 10600.677382234915 10574.27062353129 11790.245763137194 10345.906510855562 11794.309134298215 10680.510046845038 10890.803128655138 9257.597295692105 1.2368122454298738 1.1987407250645066 1.131911316006587 1.1450786898202834 1.1422262478895988 1.2735751390507797 1.1175584960548983 1.274014061919342 1.1537021654436261 1.1764178955724314 1.0 13.176422091605563 -10.211977621179479 0.7318279400220405 1.002489190127757 1.1861960701724288 0.050910040897305775 0.07290370114065724 0.31708318665617136 0.32384073724673984 0.030611175128716674 0.010706383195379511 6.13793632607044e-11 10.211977621179479 0.18370688004467173 QEQLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 QEQLSPK 7 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 QEQLS(1)PK;QEQLS(1)PK 114.86 0.0073290000000000004 366180000.0 16000.1 17477.7 20223.0 15880.5 21683.5 15288.2 19025.7 18696.0 18368.4 19666.1 19213.7 True False 17624.418373348915 18950.607116993484 21595.454390778024 16861.402417767727 20160.525764014055 15163.69796798656 19749.73342476251 18323.09361327173 17596.440025831645 18424.379089762366 16850.536705679424 1.0459262325697114 1.1246292891434275 1.2815885195810612 1.0006448288430267 1.1964322630280975 0.899894064672473 1.1720536722195871 1.0873893178189382 1.0442658494017474 1.0934001338694739 1.0 14.040506922902628 -8.451848907983818 0.2913397576210474 0.9897849236160491 1.1430239637046475 0.033296730845654654 0.0992413684949131 1.8602510143883024 0.49785310561334367 0.08312132950182265 0.09850216083289431 3.5330606437866378e-09 8.451848907983818 0.15323904008859845 QEQS(ph)PNANNDQPEDLIQGCSESDSSVLR ddPTM_A549_PD325901_60min_R1 2 QEQSPNANNDQPEDLIQGCSESDSSVLR 28 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 QEQS(0.999)PNANNDQPEDLIQGCS(0.001)ESDSSVLR;QEQS(1)PNANNDQPEDLIQGCSESDSSVLR 84.226 5.4454e-07 7007000.0 828.74 574.97 748.46 513.1 914.3299999999999 659.8399999999999 663.84 830.88 560.4300000000001 698.87 581.6899999999999 True False 912.873074713857 623.4247397573903 799.2549964556056 544.7930216653514 850.1106150672615 654.4664818092549 689.1027944671864 814.3074465872498 536.8770760478226 654.7432289300996 510.1458176367205 1.7894355753866482 1.2220520451298431 1.5667187083061855 1.0679162757604013 1.6664071049439302 1.2829008083239966 1.3507957345597663 1.5962248800932552 1.0523992503455897 1.2834432946313954 1.0 8.994765868844887 -8.820637918848515 8.48806397132092 1.0240027759589174 1.425939835817726 0.29787582707132054 0.21388134696188354 0.1602523603089919 20.894407686382024 0.030717117887015418 0.032682536925822625 1.51133966717922e-09 8.820637918848515 0.40193705985880857 QERLS(ph)PEVAPPAHR ddPTM_A549_MK2206_60min_R1 4 QERLSPEVAPPAHR 14 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR 165.17 3.3178e-20 1084230000.0 8704.6 9144.3 8734.9 7490.1 11809.899999999998 8903.4 7666.200000000001 7859.7 11541.8 11779.900000000001 12486.2 True False 10173.723672962444 9609.705811536776 9973.64016570693 9325.174836243368 10072.679354479933 9845.551878401402 9059.049307099884 8973.83654432175 8927.600728467263 9118.812408504144 9385.531938411068 1.0839794419457074 1.0238850471765226 1.0626611502848313 0.9935691335809446 1.0732134758666856 1.0490137312417707 0.9652142645239928 0.9561351027527357 0.9512088166180882 0.9715818419608853 1.0 13.196222798834896 -7.7588087073720695 24.997725874893202 0.973680495727074 1.046013405522494 0.6979041641501824 0.025741892996785087 34.82871786793496 330954.1045582735 0.004297666367371972 0.0062157502031989715 1.7425742517939955e-08 7.7588087073720695 0.07233290979542006 QERLS(ph)PEVAPPAHR ddPTM_A549_PD325901_60min_R1 4 QERLSPEVAPPAHR 14 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR 156.08 1.6547000000000001e-19 1433230000.0 15772.3 17272.5 18899.6 14887.400000000001 20082.300000000003 16582.9 18228.5 18216.3 17441.4 18123.4 19719.3 True False 17373.492285046417 18728.11419284403 20182.240508527324 15806.960886261462 18671.788528173933 16447.854360442965 18922.195542517937 17852.961606089106 16708.398612102315 16979.085431041207 17293.951110941878 1.0045993638812944 1.0829285958253205 1.1670115394138028 0.9140167440545384 1.0796716382735867 0.9510755671118101 1.0941510948614783 1.032324047382876 0.9661411961278713 0.9817933057702785 1.0 14.077979895548191 -7.218603459868877 0.47990666148340955 0.9856747602410225 1.0710617235223987 0.10087027491341105 0.06735478436097803 1.6626620664027951 0.6854634170525967 0.01697312538026263 0.05945155013476148 6.045003270081665e-08 7.218603459868877 0.08538696328137618 QES(ph)DPEDDDVK ddPTM_A549_MK2206_60min_R1 2 QESDPEDDDVK 11 0 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 QES(1)DPEDDDVK;QES(1)DPEDDDVK 194.51 8.812699999999999e-24 40646000.0 12977.0 13218.3 10634.3 9657.9 21105.0 16345.0 12425.0 16739.7 18272.699999999997 11605.599999999999 13572.5 True False 15167.200342811107 13891.055010075832 12142.403646770683 12024.085933559605 18000.482457624446 18074.617051067107 14682.461668194937 19112.6037381812 14133.96262550589 8983.886899560739 10202.073668056279 1.486678182916983 1.3615913256507965 1.190189763556577 1.1785923455158172 1.7643944793288224 1.7716610994155586 1.4391644430256572 1.8734038157384305 1.385400957234876 0.8805941999507605 1.0 13.316574802977392 -10.020773922217977 0.959011100840098 1.0431756568361101 1.49291773726945 0.4605752685757041 0.22454311202230645 0.3837852803037644 0.7127447689619844 0.08946264089503203 0.04543356583990287 9.53292283888017e-11 10.020773922217977 0.44974208043333985 QES(ph)DPEDDDVK ddPTM_A549_PD325901_60min_R1 2 QESDPEDDDVK 11 0 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 QES(1)DPEDDDVK;QES(1)DPEDDDVK 187.63 8.5331e-19 38038000.0 15331.7 13799.6 15585.099999999999 11889.5 14683.2 11078.7 12359.2 12762.0 12373.5 14128.8 11318.4 True False 16888.162897398994 14962.540721700409 16642.798606819684 12623.88741198636 13651.902686290096 10988.478740331275 12829.536119213744 12507.451898404677 11853.484825005331 13236.705156763905 9926.308553249084 1.701353812124967 1.5073620411288609 1.6766352282462704 1.2717605285254105 1.375325239292662 1.107005558147245 1.2924780698071665 1.2600305371638616 1.1941483343398027 1.3334972498342559 1.0 13.277041585289831 -2.0000000000000586 0.16687867457120314 0.9772988568873563 3.8914223638967225 0.6046336580481734 0.13102372596422215 15.607934711467918 0.15661944576044726 0.1219883195957088 11.414463741095808 0.00999999999999865 2.0000000000000586 2.914123507009366 QES(ph)DPEDDDVKKPALQSSVVATSK ddPTM_A549_MK2206_60min_R1 4 QESDPEDDDVKKPALQSSVVATSK 24 2 Q9H307 Q9H307 PNN Pinin 1 QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK 264.31 6.774699999999999e-125 1720510000.0 64628.6 69340.9 64638.9 59127.399999999994 102820.0 73528.59999999999 67021.5 70351.2 105509.0 76014.9 79657.6 True False 75536.32766243385 72870.05563106963 73805.66798785485 73613.61565432994 87695.3142048305 81309.34764766532 79198.43900965207 80323.69804151407 81611.37996325127 58843.081295359145 59876.419482082114 1.2615371512827003 1.2170075676097472 1.2326332908055906 1.229425812215753 1.4646051811944623 1.3579527358344625 1.3226983125360732 1.341491337262589 1.3629969973016387 0.9827421513233237 1.0 15.869700332577573 -10.748633321317943 0.9291293996914362 0.994152166737541 1.311975781192232 0.745660495174125 0.07131492837565549 0.2679482193660622 0.39873060969866475 0.058368855223632846 0.013885337367052733 1.783884281116032e-11 10.748633321317943 0.3178236144546909 QES(ph)DPEDDDVKKPALQSSVVATSK ddPTM_A549_PD325901_60min_R1 4 QESDPEDDDVKKPALQSSVVATSK 24 2 Q9H307 Q9H307 PNN Pinin 1 QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK 259.81 3.9440999999999996e-112 2377017000.0 21506.9 21367.4 24174.7 19868.2 28599.3 19641.7 24555.800000000003 25892.500000000004 24896.9 26076.1 23384.9 True False 23690.264655457013 23168.105786896827 25815.340516280543 21095.413590043918 26590.583830228843 19481.74450738487 25490.284406449355 25376.05377522669 23850.569874301953 24429.650595824947 20508.7055490948 1.1551321266350054 1.1296717743319205 1.2587503611323712 1.0286077558403004 1.2965510556760849 0.9499256040684021 1.242900696264296 1.2373308356531902 1.1629485740680816 1.1911844234802624 1.0 14.323948815451274 -10.528111654682085 0.8551424080601041 1.0006167993430606 1.16174962450658 0.0 0.11175505889664765 0.5855158025204644 0.7736148398725916 0.057740356886162136 0.016667326448417855 2.964069245933408e-11 10.528111654682085 0.16113282516351934 QES(ph)FEGFIAR ddPTM_A549_MK2206_60min_R1 2 QESFEGFIAR 10 0 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 QES(1)FEGFIAR;QES(1)FEGFIAR 68.069 0.0042746 2171100.0 590.25 754.27 803.6400000000001 642.8 1259.1 911.19 799.73 856.74 998.1600000000001 906.4100000000001 1156.39 True False 689.8697697730033 792.6591212523477 917.6082362441152 800.2860288563882 1073.888057919684 1007.6115210010305 945.0305891272062 978.1855186562103 772.0783537339835 701.6513514709154 869.2264482596131 0.7936594326533412 0.9119132567116769 1.0556607407441103 0.9206876188118077 1.235452579784991 1.1592048573976268 1.0872087371701242 1.125351766061373 0.8882361498316785 0.807213532073005 1.0 9.76358826235245 -3.7536399047952167 9.79087140537956 0.9904580475831795 0.645771426315286 0.0 0.13954211436298242 0.0 0.0 0.017914723200144495 0.0 0.00017634375944246844 3.7536399047952167 -0.3446866212678935 QES(ph)FEGFIAR ddPTM_A549_PD325901_60min_R1 2 QESFEGFIAR 10 0 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 QES(1)FEGFIAR;QES(1)FEGFIAR 75.479 0.0013265999999999998 1391500.0 743.32 927.6 860.27 850.86 1125.9 925.11 979.7 859.25 963.46 767.16 1132.8 True False 818.7812991967379 1005.7721074124828 918.6530954237555 903.4156897567353 1046.8206681441377 917.5762108792426 1016.983019612411 842.1115846814155 922.9691267224014 718.7213866756549 993.4727814108496 0.8241607767391181 1.0123801338413787 0.924688740962947 0.9093512239698983 1.0536983878486612 0.9236047811759625 1.0236647028901729 0.8476443446045062 0.9290331290321566 0.7234434602777793 1.0 9.95633663167191 -4.7166627083802375 0.007139767088122343 1.848374610649873 2.2186055153075433e-07 0.0 0.10204359751291751 24784.085799861463 22.42847166969738 2722.212859970859 3094.2631644090766 1.9201594394515705e-05 4.7166627083802375 -1.8483743887893216 QES(ph)LQER ddPTM_A549_MK2206_60min_R1 1 QESLQER 7 0 Q9Y679 Q9Y679 AUP1 Ancient ubiquitous protein 1 1 QES(1)LQER 70.1 0.021519 12077000.0 265.42 530.11 456.02 324.86 505.91 132.57 210.44 325.69 427.47 631.75 425.72 True False 310.21640710402454 557.09033471712 520.6904931213495 404.45071458351975 431.49130917492477 146.5984694071561 248.6742240205186 371.85755488379334 330.6487275293198 489.03723623057 320.0019747257262 0.9694202898901206 1.7408965528872198 1.627147749846336 1.2639006835197646 1.3484020201586446 0.4581173898467524 0.7771021545528192 1.1620476879947774 1.033270897195928 1.528231932473929 1.0 8.321936997756806 -7.028297489335454 24.681875148678117 0.9707269212809687 1.4240277970520403 0.29348309765092395 0.30546766218638466 437.31506404859954 381438.1893991497 0.03690659024277655 0.06401783093436193 9.369200020091811e-08 7.028297489335454 0.4533008757710716 QES(ph)LQER ddPTM_A549_PD325901_60min_R1 1 QESLQER 7 0 Q9Y679 Q9Y679 AUP1 Ancient ubiquitous protein 1 1 QES(1)LQER 53.123999999999995 0.04566 30336000.0 400.73 562.04 511.2 303.59 866.29 511.14 497.35 689.54 362.96 463.63 675.37 True False 441.4118145981661 609.4050832795513 545.8931060953231 322.3420647970847 805.4447789382588 506.97744530792676 516.2769264103628 675.7865837663347 347.7060534274001 434.35632267640904 592.3037715231685 0.7452456591033202 1.0288725356456958 0.921643812416565 0.5442174780824875 1.3598508361123158 0.8559416125347024 0.8716421391049138 1.1409459406758153 0.5870400800137388 0.7333337107738116 1.0 9.210193462367958 -8.758741521440156 24.999988864652217 0.8049911609344409 0.9329082536980184 0.09213595227803384 0.21774398615788307 167.64712462927176 1553516.5031715475 0.039558288456225124 0.043878350040260826 1.742843851193308e-09 8.758741521440156 0.12791709276357754 QES(ph)PPAAAVRPFTPQPSK ddPTM_A549_PD325901_60min_R1 1 QESPPAAAVRPFTPQPSK 18 1 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 QES(0.96)PPAAAVRPFT(0.036)PQPS(0.004)K 74.748 0.00014455 11373000.0 5998.5 6975.0 5964.3 6934.0 7958.4 6080.2 6918.0 7024.8 6526.7 6971.4 6350.3 True False 6607.463304137691 7562.807728764629 6369.073264249487 7362.297431743417 7399.42943898953 6030.684867083882 7181.268275674853 6884.684853151007 6252.405496210636 6531.224614253435 5569.253357868399 1.1864181568975454 1.3579572058936196 1.1436134890956398 1.321954121792961 1.3286214441178918 1.0828533879794784 1.2894490184270309 1.2361953049638386 1.1226649416796706 1.1727289448999363 1.0 12.443268210233995 -9.282581648025722 0.5642898996640601 1.0063754308372408 1.2603291249327546 0.25414759526116537 0.09364242635771282 0.34861130216339636 0.2532591660261893 0.033393172029556745 0.021966992381746698 5.21697015183411e-10 9.282581648025722 0.2539536940955138 QES(ph)PPAAAVRPFTPQPSKDTLLPPFR ddPTM_A549_MK2206_60min_R1 2 QESPPAAAVRPFTPQPSKDTLLPPFR 26 2 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 QES(0.995)PPAAAVRPFT(0.004)PQPSKDTLLPPFR;QES(0.996)PPAAAVRPFT(0.004)PQPSKDTLLPPFR 48.449 0.0021606 5715100.0 2394.5 2387.1000000000004 2517.6 2556.1000000000004 3840.7 2468.7 2589.8 3361.4 4083.0 3431.3 4037.3 True False 2798.6330600956458 2508.593193871529 2874.63353686748 3182.344614747688 3275.738117744527 2729.9361954095652 3060.333137085816 3837.888743855764 3158.2070192112005 2656.1669468586533 3034.726986188514 0.9222025812643556 0.8266289538691629 0.9472461773168912 1.0486428035309283 1.0794177310357373 0.8995656636771294 1.0084377115351197 1.2646570058270667 1.0406890087921128 0.875257299568382 1.0 11.567351017489484 -6.04320335795139 3.790805840562328 1.0334059834423168 0.8748665037049518 0.26942405697471417 0.09789431711355844 0.1838452565492735 5.481517936086547 0.012046665839383424 0.036776499004320735 9.053085918036241e-07 6.04320335795139 -0.15853947973736504 QES(ph)PPAAAVRPFTPQPSKDTLLPPFR ddPTM_A549_PD325901_60min_R1 2 QESPPAAAVRPFTPQPSKDTLLPPFR 26 2 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 QES(1)PPAAAVRPFTPQPSKDTLLPPFR;QES(0.993)PPAAAVRPFT(0.005)PQPS(0.001)KDT(0.001)LLPPFR 73.317 1.8656e-06 10413200.0 3464.8 3999.7 4518.4 3681.2 5361.9 4639.799999999999 4100.7 5041.8 4914.4 5222.5 4478.9 True False 3816.5439453490517 4336.768755948369 4825.045795346453 3908.5793633882126 4985.298641550807 4602.015007120789 4256.754382489143 4941.2373437844135 4707.86485828635 4892.750458722577 3928.023694086382 0.971619379764648 1.1040587057754643 1.2283647378732803 0.9950498438368784 1.2691620595507471 1.171585348135526 1.0836885706411759 1.2579448925482346 1.1985327037039044 1.2456010553318673 1.0 11.939587916768314 -4.397968879561853 13.537047947877577 1.1165862270985474 1.1259896990144826 0.0 0.10985902905157117 0.0 0.0 0.014435330882791487 0.0 3.9997340981163244e-05 4.397968879561853 0.009403471915935269 QES(ph)VELTVQQK ddPTM_A549_MK2206_60min_R1 1 QESVELTVQQK 11 0 P98174 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 1 QES(1)VELTVQQK 107.37 0.00013989 1823500.0 1178.4 1476.9 1374.2 1258.9 2400.5 1610.8 1386.7 1466.0 1902.6 1749.1 1829.2 True False 1377.2851108860766 1552.0679016500608 1569.082223690536 1567.3305565141677 2047.3896299231214 1781.2537868374975 1638.6454402644608 1673.8099894367062 1471.6641378278796 1353.9770951972923 1374.9591566482618 1.0016916533313505 1.1288101862120306 1.1411846061780395 1.1399106285708513 1.4890548712108973 1.2954957812562666 1.191777539239047 1.217352516504529 1.0703329845923246 0.9847398656538152 1.0 10.425173048480346 -8.902378370816923 2.299113386196318 1.026791741658787 1.2078391623814826 0.32713024917987577 0.11631692430981606 0.2634809977228669 2.7279531676120574 0.023122168207756616 0.023912185271461744 1.252049874955304e-09 8.902378370816923 0.18104742072269553 QES(ph)VELTVQQK ddPTM_A549_PD325901_60min_R1 2 QESVELTVQQK 11 0 P98174 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 1 QES(0.769)VELT(0.231)VQQK;QES(1)VELTVQQK 132.97 7.0248e-08 7473300.0 7017.3 7116.0 6994.9 6728.3 8553.6 6405.299999999999 6586.5 6263.1 6115.3 7691.5 7644.299999999999 True False 7729.691130136773 7715.6902936041715 7469.615977750738 7143.891809922017 7952.824644318052 6353.137360470446 6837.152861771096 6138.177557193097 5858.295207528597 7205.857377360398 6704.09956121024 1.1529797640328288 1.1508913647773031 1.1141863138444061 1.0656004948459306 1.1862629084945138 0.9476496138615762 1.0198465579674114 0.9155856802468217 0.8738377397353334 1.0748434314808384 1.0 12.710827859027173 -7.273425585411719 24.178374081404385 0.9440365985872287 1.130024481890498 0.6240479719640822 0.06050266871796592 194.73393684483707 392813.8242719114 0.008598073605086071 0.013815730303396752 5.3281251175278205e-08 7.273425585411719 0.18598788330326943 QES(ph)VVR ddPTM_A549_MK2206_60min_R1 1 QESVVR 6 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 QES(1)VVR 68.22399999999999 0.053690999999999996 19411000.0 1711.6 1693.0 1298.9 1545.3 1772.3 1643.9 1358.4 1619.6 2434.5 2058.7 2300.2 True False 2000.4762353976664 1779.166468612333 1483.1035514129226 1923.8985693711518 1511.5970177516133 1817.856406867496 1605.2036965855948 1849.183259816979 1883.0896370976423 1593.638240170753 1728.9968577095624 1.1570155413976508 1.0290166003940755 0.8577826760064909 1.1127253128266408 0.8742624435732387 1.0513937019386186 0.9284017431425764 1.0695122154626875 1.0891226486045844 0.9217126295312522 1.0 10.755719531681061 QES(ph)VVR ddPTM_A549_PD325901_60min_R1 1 QESVVR 6 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 QES(1)VVR 68.22399999999999 0.053690999999999996 19688000.0 1970.0 2061.7 1749.9 1607.2 2387.8 1524.2 1918.6 2201.6 1905.7 2096.1 2095.7 True False 2169.992949762651 2235.446694536778 1868.6587370035322 1706.473093783966 2220.0891654628053 1511.7874205468988 1991.6133728982052 2157.6873608782125 1825.610056250264 1963.751888277337 1837.9421857368625 1.1806644227455194 1.2162769383524157 1.0167124687082336 0.9284694083561784 1.2079211101913598 0.822543512129462 1.083610457583427 1.1739691148191143 0.9932902516834857 1.0684513928222585 1.0 10.84387567062388 -5.765565751055355 24.27075824792056 1.0132569252082506 1.1984707294534205 0.262652235656883 0.10291197338743326 51.22311326774861 301301.8347782094 0.012837493800356474 0.04216183674295499 1.715671942186251e-06 5.765565751055355 0.18521380424516987 QESDKNGESAS(ph)PERDR ddPTM_A549_MK2206_60min_R1 3 QESDKNGESASPERDR 16 2 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 QESDKNGES(0.19)AS(0.809)PERDR;QESDKNGES(0.159)AS(0.841)PERDR;QESDKNGES(0.028)AS(0.972)PERDR 107.45 2.3599e-07 88975000.0 3110.17 3288.32 3527.24 3098.12 5091.799999999999 3628.37 3639.79 4457.1 5277.2 5091.7 4605.65 True False 3635.090659644051 3455.6814424496774 4027.455670710381 3857.1595390798934 4342.802965066671 4012.321705082921 4301.092728795113 5088.907574296279 4081.9226259567354 3941.481433660772 3461.939995526499 1.0500155012337868 0.9981921832599904 1.163352246403646 1.1141612922419497 1.2544420095895419 1.158980718980578 1.242393783356431 1.4699583415287782 1.1790853195697715 1.1385181253152665 1.0 11.757365003905468 -5.763495254319172 24.98453039274175 1.1445556212168138 1.0241038222974568 0.14617004697232416 0.11773907413455748 91.53977347807668 1112536.056705239 0.019657774912072993 0.06591586137485579 1.7238709282373277e-06 5.763495254319172 -0.12045179891935698 QESDKNGESAS(ph)PERDR ddPTM_A549_PD325901_60min_R1 4 QESDKNGESASPERDR 16 2 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 QESDKNGESAS(1)PERDR;QESDKNGES(0.199)AS(0.801)PERDR;QESDKNGESAS(1)PERDR;QESDKNGES(0.06)AS(0.94)PERDR 173.56 8.370999999999999e-29 99532000.0 10909.3 11455.099999999999 12297.2 9792.7 15425.5 10403.6 12311.2 11285.4 12156.9 12178.4 13003.6 True False 12016.804104997804 12420.461478676945 13131.761941070825 10397.572838164659 14342.06609508606 10318.87653090258 12779.70945294714 11060.303843774966 11645.987769758542 11409.453745621253 11404.239636612048 1.0537137492638426 1.089109127346152 1.1514807088859091 0.911728722779939 1.2576082713171377 0.9048281042582593 1.1206103922894866 0.9698414095287059 1.0211980930644764 1.0004572079485654 1.0 13.477282639521912 -7.309421461402922 24.99993014302251 1.0095387184821516 1.0857364166525687 0.19240968214315302 0.0906363022465865 525.8900203565358 274001.2515998015 0.011837809655783427 0.01892405434653096 4.904317053266688e-08 7.309421461402922 0.0761976981704171 QESDPEDDDVKKPALQSSVVATSK ddPTM_A549_MK2206_60min_R1 2 QESDPEDDDVKKPALQSSVVATSK 24 2 Q9H307 Q9H307 PNN Pinin 0 ; 158.94 5.078999999999999e-34 13815700.0 3679.1 3987.8 4264.3 4047.0 7019.5 3817.3 4066.4 4233.4 6834.299999999999 5464.8 5075.700000000001 False True 4300.042134641011 4190.761986729036 4869.041861798537 5038.515181676736 5986.940848675423 4221.244152281338 4805.212243665828 4833.497414243765 5286.341962134489 4230.297884531568 3815.2636078064625 1.1270629179705005 1.0984200352904216 1.2762006409821656 1.3206204602395917 1.5692076522380949 1.1064095659456383 1.25947057336584 1.2668842604620767 1.3855771201020117 1.1087825952251107 1.0 11.897567025217725 -10.934525608994134 1.170746141026961 0.9987447288548772 1.278629916468717 0.2658802049716742 0.13238556792968578 0.42348360624427983 1.0238400560982095 0.09616085835110431 0.02216692115860486 1.1627179871203906e-11 10.934525608994134 0.27988518761383974 QESDPEDDDVKKPALQSSVVATSK ddPTM_A549_PD325901_60min_R1 1 QESDPEDDDVKKPALQSSVVATSK 24 2 Q9H307 Q9H307 PNN Pinin 0 155.95 6.863999999999999e-34 7977200.0 2817.1 3307.0 3310.1 2925.8 3724.4 2710.4 2467.8 3178.9 2916.1 3284.5 3246.3 False True 3103.0899181605887 3585.6924959175108 3534.743291248297 3106.5200210260864 3462.8109924824853 2688.3274010302566 2561.7134794319772 3115.4943457011923 2793.5464580109137 3077.116109463723 2847.02567999121 1.0899409653973229 1.259452108604999 1.2415565184713087 1.0911457676193765 1.216290747505016 0.9442582200517969 0.8997858703683651 1.094297943147043 0.9812157570772382 1.0808178272115985 1.0 11.475239790818796 -7.2594519176788985 24.984088446843696 0.9889790310749433 1.1826284888233365 0.6041800247632065 0.07206760825660598 76.66394635434006 963729.3021357693 0.009357285647844507 0.015696478391811545 5.502348356377851e-08 7.2594519176788985 0.19364945774839315 QESIPSKPSQDRPPS(ph)SSLEECPIPK ddPTM_A549_PD325901_60min_R1 3 QESIPSKPSQDRPPSSSLEECPIPK 25 2 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 QES(0.001)IPS(0.004)KPS(0.061)QDRPPS(0.311)S(0.311)S(0.311)LEECPIPK;QESIPSKPS(0.01)QDRPPS(0.897)S(0.084)S(0.008)LEECPIPK;QESIPSKPSQDRPPS(0.882)S(0.116)S(0.002)LEECPIPK 198.06 1.4452999999999997e-68 38093700.0 7096.1 8018.1 7737.9 7895.6 8753.9 7037.6 8208.7 7948.2 6873.0 7713.299999999999 8113.4 True False 7816.490848127281 8693.813426524393 8263.04042577269 8383.293279791362 8139.056263315548 6980.288118908842 8521.086570472999 7789.666915757719 6584.151711501322 7226.280921639987 7115.5032350801475 1.0985155357095748 1.2218128696313448 1.1612728085112896 1.17817292787682 1.1438482977829567 0.9809971112788367 1.1975381485968812 1.0947457486005876 0.9253248145599585 1.0155684964084752 1.0 12.796750077827152 -8.634895355465078 4.916730156977581 0.9650342451311587 1.1400695043912803 0.5421643404959888 0.06365652604916246 0.10300520451762754 4.063643835798926 0.010888800887139656 0.01234251396515709 2.317953100314264e-09 8.634895355465078 0.17503525926012165 QESTEYRR ddPTM_A549_MK2206_60min_R1 1 QESTEYRR 8 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 115.86 0.0013100999999999998 12555000.0 2590.5 2759.9 2361.3 2553.5 3543.8 2634.5 2415.1 2302.3 3968.1 4187.2 3923.5 False True 3027.7130683557216 2900.3671215139843 2696.1678466019953 3179.1076146309697 3022.511714443474 2913.2810413604348 2853.892408439242 2628.6580754980446 3069.331685753604 3241.3086118633014 2949.1866669087353 1.0266264602129427 0.9834464376424424 0.9142072547846054 1.077960798582896 1.0248628031441618 0.9878252448543937 0.9676879529062233 0.8913162754303847 1.0407383568469748 1.0990516972805797 1.0 11.526101424423777 QESTEYRR ddPTM_A549_PD325901_60min_R1 2 QESTEYRR 8 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 0 ; 122.94 0.0011609 50708000.0 4286.6 4522.5 4812.3 4563.7 4793.9 4763.9 5220.0 5574.7 5468.6 4957.7 5650.200000000001 False True 4721.772476371867 4903.626946715132 5138.891616710726 4845.589384085296 4457.193002057185 4725.104377866013 5418.649956493602 5463.508235232451 5238.773759568766 4644.669975913627 4955.261219568843 0.9528806388097352 0.9895799089965627 1.0370576623522303 0.9778675975646971 0.8994869906061188 0.9535530355505948 1.0935144922521518 1.1025671489641125 1.057214448933651 0.937320914096585 1.0 12.27474539661334 -7.739917972289746 24.998508935385807 1.0391061916329156 0.9697849732802342 0.30849441464048866 0.05194300610681521 222.2942834673933 258208.73703571057 0.007526515847614823 0.011157908430470345 1.8200445884942986e-08 7.739917972289746 -0.06932121835268146 QET(ph)VDCLK ddPTM_A549_MK2206_60min_R1 2 QETVDCLK 8 0 Q13557-12;Q13557-8;Q13557;D6R938;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11;Q13557-5;Q13557-3;Q13557-9;Q13557-4;H0Y9C2;A0A5F9ZHR5;D6RFJ0;A0A5F9ZH90;A0A5F9ZH50;A0A5F9ZHM9;A0A5K1VW76;A0A5F9ZHY2;A0A5F9ZH21;Q9UQM7;Q9UQM7-2 Q13557-12 CAMK2D;CAMK2A Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit alpha 1 QET(1)VDCLK;QET(1)VDCLK 89.40299999999999 0.0028201999999999997 24039000.0 5145.5 14744.9 10635.2 3632.5 13357.5 10945.099999999999 5224.5 10371.8 12545.4 9713.5 11264.4 True False 6013.934604603113 15495.352429440041 12143.431280303872 4522.46266306912 11392.629444573256 12103.303217230621 6173.724022976616 11842.034412305342 9703.88693088714 7519.213603681262 8467.138598375623 0.7102676464699487 1.8300577284057622 1.4341835956994406 0.5341193616385034 1.345511156125267 1.4294443248575828 0.729139360510883 1.398587524547806 1.146064496068221 0.888046595236292 1.0 13.047658789356618 -14.999999701555623 0.1157831516576548 0.3638515302351616 1.2892340301564518 0.045333112593807234 0.36777281475291157 247.70830453279862 2.0119477683468987 36.825229044017284 1.5065282646967868 1.0000006871938091e-15 14.999999701555623 0.9253824999212902 QET(ph)VDCLK ddPTM_A549_PD325901_60min_R1 2 QETVDCLK 8 0 Q13557-12;Q13557-8;Q13557;D6R938;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11;Q13557-5;Q13557-3;Q13557-9;Q13557-4;H0Y9C2;A0A5F9ZHR5;D6RFJ0;A0A5F9ZH90;A0A5F9ZH50;A0A5F9ZHM9;A0A5K1VW76;A0A5F9ZHY2;A0A5F9ZH21;Q9UQM7;Q9UQM7-2 Q13557-12 CAMK2D;CAMK2A Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit alpha 1 QET(1)VDCLK;QET(1)VDCLK 120.96 0.0012615 53829000.0 19273.1 25155.0 35485.0 22952.0 21805.3 14398.9 19794.0 20390.5 10901.2 17106.5 20213.1 True False 21229.690923893664 27274.90013148017 37893.22548863954 24369.692912225968 20273.770952201245 14281.64013234008 20547.271501692416 19983.795481462195 10443.06047394416 16026.392670586438 17727.016841397985 1.197589595239503 1.5386063191289452 2.1375974213634925 1.3747204693411985 1.1436651261511646 0.8056426109433201 1.1590935849797512 1.127307299375603 0.5891042225196308 0.904065969698857 1.0 14.113662154915856 -6.834184286844651 2.260760939055026 0.8585115616780492 1.626003498818948 0.5591989669242647 0.25994311658758223 0.15839744081691798 1.648540701477717 0.042185570211157035 0.09137568586135174 1.464926087965611e-07 6.834184286844651 0.7674919371408988 QET(ph)VDCLKK ddPTM_A549_MK2206_60min_R1 2 QETVDCLKK 9 1 Q13557-12;Q13557-8;Q13557;D6R938;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11;Q13557-5;Q13557-3;Q13557-9;Q13557-4;H0Y9C2;A0A5F9ZHR5;D6RFJ0;A0A5F9ZH90;A0A5F9ZH50;A0A5F9ZHM9;A0A5K1VW76;A0A5F9ZHY2;A0A5F9ZH21;Q9UQM7;Q9UQM7-2 Q13557-12 CAMK2D;CAMK2A Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit alpha 1 QET(1)VDCLKK;QET(1)VDCLKK 66.98899999999999 0.0031608 52094000.0 10018.3 26981.0 18166.3 8890.2 24578.0 16628.8 9723.7 16508.3 21443.0 19120.2 21328.7 True False 11709.144116081106 28354.21765483126 20742.55450460588 11068.299399096248 20962.608758279737 18388.4485786959 11490.370424388508 18848.40207954842 16586.19473743469 14800.933540444381 16032.195147826258 0.7303518955524131 1.7685798727740472 1.2938062637927832 0.6903795329984462 1.3075320356939377 1.1469701066599802 0.7167059980520785 1.1756594718162472 1.0345554420028094 0.9232006848701053 1.0 13.968684354141297 -6.041735976543372 24.522735665766575 1.018358462588888 1.3198979040896897 0.13831370097404827 0.2831646948749062 422.967787075808 248522.2397755565 0.0343150178369948 0.09080006165118856 9.083725951848525e-07 6.041735976543372 0.3015394415008017 QET(ph)VDCLKK ddPTM_A549_PD325901_60min_R1 2 QETVDCLKK 9 1 Q13557-12;Q13557-8;Q13557;D6R938;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11;Q13557-5;Q13557-3;Q13557-9;Q13557-4;H0Y9C2;A0A5F9ZHR5;D6RFJ0;A0A5F9ZH90;A0A5F9ZH50;A0A5F9ZHM9;A0A5K1VW76;A0A5F9ZHY2;A0A5F9ZH21;Q9UQM7;Q9UQM7-2 Q13557-12 CAMK2D;CAMK2A Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit alpha 1 QET(1)VDCLKK;QET(1)VDCLKK 69.345 0.0025017 123006000.0 21116.6 25157.2 36611.0 24368.4 24329.9 18284.4 24261.0 24531.0 15066.0 17883.7 20877.5 True False 23260.341686780695 27277.28553320109 39095.6426198276 25873.58072334819 22621.05175759843 18135.497908573507 25184.2656311286 24041.70996080278 14432.828413426287 16754.520129948665 18309.699853376605 1.2703835602466804 1.4897724021494934 2.13524213574794 1.4131078570671753 1.2354681911089187 0.990485811007384 1.3754603206389653 1.3130586603454943 0.7882613330094889 0.9150625222760743 1.0 14.16032052111647 -7.455642917977078 0.676192115973381 0.9138664867008284 1.6191203688844407 0.4479449172485449 0.2593750555806894 0.44621431376654397 0.40267294798455433 0.05643542870835108 0.13704256208198576 3.5023301437359674e-08 7.455642917977078 0.7052538821836123 QET(ph)VECLR ddPTM_A549_MK2206_60min_R1 2 QETVECLR 8 0 Q13555-9;H0Y6G2;Q8WU40;Q5SWX3;A0A2Q3DQE3;Q13555-10;Q13555-3;Q13555-5;Q13555-4;Q13555-7;Q13555-11;Q13555-2;Q13555-8;Q13555;Q13555-6 Q13555-9 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma 1 QET(1)VECLR;QET(1)VECLR 122.69 0.0012232999999999999 32128000.0 2837.7 7109.4 4500.2 2032.9299999999998 6126.4 4949.299999999999 2470.0 4783.799999999999 5535.9 4293.799999999999 5501.3 True False 3316.6343848959764 7471.238093297411 5138.396029000255 2530.9979412616954 5225.214675593003 5473.0316409205525 2918.7670278021324 5461.918299773068 4282.027489015747 3323.827597826388 4135.175381844022 0.8020541037891774 1.8067524115423903 1.2426065534151205 0.61206544041018 1.2636017080520765 1.32353071769351 0.7058387512697346 1.3208432038346591 1.0355129090331927 0.8037936220117887 1.0 12.01373280321243 -6.010334174135604 24.99378618896689 1.0307820349185526 1.3594722933119137 0.12897222964708832 0.3116265530020758 583.3895577364915 1410972.7521706212 0.03691001578523239 0.10561699644192073 9.764855609453294e-07 6.010334174135604 0.3286902583933611 QET(ph)VECLR ddPTM_A549_PD325901_60min_R1 2 QETVECLR 8 0 Q13555-9;H0Y6G2;Q8WU40;Q5SWX3;A0A2Q3DQE3;Q13555-10;Q13555-3;Q13555-5;Q13555-4;Q13555-7;Q13555-11;Q13555-2;Q13555-8;Q13555;Q13555-6 Q13555-9 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma 1 QET(1)VECLR;QET(1)VECLR 111.86 0.0015727 59756000.0 8409.900000000001 11739.8 15681.7 10849.6 9707.400000000001 7177.7 11067.3 10577.1 5541.200000000001 7572.1 10470.7 True False 9263.666856958844 12729.154146831681 16745.954463722665 11519.755150770601 9025.585712711974 7119.247190958854 11488.472157758943 10366.13144292557 5308.322634042066 7093.9963137373325 9182.870279236036 1.0087986190881408 1.386184685153875 1.823607864916484 1.2544830538245368 0.9828719603194539 0.7752747206999787 1.251076385532337 1.128855262865368 0.5780679104272056 0.7725249402442298 1.0 13.164729450326039 -6.745486614099243 3.109112926762561 0.860712250847515 1.419763193598006 0.4169748576357326 0.2488563330370669 0.17417202636838863 3.472331387154211 0.04038969926600561 0.08617772655351888 1.7968564623452913e-07 6.745486614099243 0.5590509427504909 QET(ph)VECLRK ddPTM_A549_PD325901_60min_R1 2 QETVECLRK 9 1 Q13555-9;H0Y6G2;Q8WU40;Q5SWX3;A0A2Q3DQE3;Q13555-10;Q13555-3;Q13555-5;Q13555-4;Q13555-7;Q13555-11;Q13555-2;Q13555-8;Q13555;Q13555-6 Q13555-9 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma 1 QET(1)VECLRK;QET(1)VECLRK 56.951 0.0089555 9678700.0 2924.9 3314.9 4005.5 2662.8 2582.5 2294.1 2888.9 2739.7 1925.8 2839.7 2563.3 True False 3221.833694802424 3594.25825664256 4277.337317028204 2827.275108342426 2401.1141091413415 2275.4176102064303 2998.838670366738 2685.0545342469277 1844.8653231498984 2660.400857373766 2248.0303500974846 1.433180692895321 1.598847745310332 1.9027044349480065 1.2576676770488542 1.0680968382109337 1.0121827804094183 1.3339849572034002 1.1944031512432614 0.8206585480796097 1.1834363611943224 1.0 11.134445797818595 -6.544026748219595 3.1036581062379467 0.9831935668290102 1.639761103533452 0.6077152114109168 0.18232155992963048 0.10702219393478775 2.11320878995906 0.027952281536771248 0.06550350473770476 2.8574145496454177e-07 6.544026748219595 0.6565675367044419 QETHCQS(ph)TPLKK ddPTM_A549_MK2206_60min_R1 2 QETHCQSTPLKK 12 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 QET(0.028)HCQS(0.642)T(0.33)PLKK;QET(0.002)HCQS(0.499)T(0.499)PLKK 124.16 1.4831e-06 100300000.0 6586.799999999999 7362.799999999999 7805.0 6633.0 9704.2 8027.200000000001 6974.8 8258.4 11651.7 12438.1 11465.9 True False 7698.490808201295 7737.535070938498 8911.86636290543 8258.085297766687 8276.725035076008 8876.632975975888 8242.030876726445 9429.05349028929 9012.608553941507 9628.32457136438 8618.600587258534 0.8932413946160239 0.8977716269132399 1.0340270758202266 0.9581700896982254 0.960332823325408 1.0299390122682819 0.9563073254503989 1.0940353245083552 1.0457160025799852 1.117156372880139 1.0 13.073237920830158 -4.044874771544853 0.4510921087393826 1.0238199137587498 0.5067270303568252 0.47695573552200554 0.050567286769519076 7.200973279988138 0.4294378572580245 0.008536300394166358 2.550117589310931 9.01831142383104e-05 4.044874771544853 -0.5170928834019246 QETHCQS(ph)TPLKK ddPTM_A549_PD325901_60min_R1 1 QETHCQSTPLKK 12 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 QETHCQS(0.898)T(0.102)PLKK 154.88 2.2047e-14 102480000.0 9598.1 10227.0 11509.0 10065.0 12593.0 10341.0 10927.0 13323.0 9260.2 10699.0 11295.0 True False 10572.492046252231 11088.865181659627 12290.069949239187 10686.692190726499 11708.511123491546 10256.78632454762 11342.832964483825 13057.262313308693 8871.025997212942 10023.463314097242 9905.786604904255 1.0673046440368397 1.119433077244935 1.2406960132933307 1.0788332736176272 1.1819870132973367 1.035433805879645 1.1450714028977873 1.3181449221654113 0.8955397840713616 1.0118795925943656 1.0 13.27405582675672 -8.785741970785159 24.993563083326933 0.9506715467936786 1.1454056187340418 0.4866399203362749 0.08133924113307084 121.96935404467862 125436.597910855 0.013979269192371482 0.01488550119236267 1.6377892990926612e-09 8.785741970785159 0.19473407194036318 QETVADFT(ph)PK ddPTM_A549_MK2206_60min_R1 3 QETVADFTPK 10 0 O75400-2;O75400-3;O75400;F5H578 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 QETVADFT(1)PK;QETVADFT(1)PK;QETVADFT(1)PK 102.62 0.00041726 7750700.0 6120.4 6704.4 5718.51 6405.5 10386.0 7532.900000000001 6972.000000000001 8297.9 10521.0 7837.000000000001 9840.4 True False 7153.37389058651 7045.625323192274 6529.480706590426 7974.8477875538265 8858.233158251001 8330.026478065674 8238.722152970233 9474.152736252963 8138.010298584638 6066.616256967117 7396.757098776271 0.9670959577366646 0.9525289568259462 0.8827491046949036 1.0781546130361905 1.1975833517253822 1.1261727763703102 1.1138289446240242 1.2808522180376019 1.1002132677752796 0.8201724317769994 1.0 12.852677184735258 -6.294471713188879 11.657811357648685 1.0877289937827381 0.9359810137453114 0.28063663134924566 0.11083545800921571 0.9727028658674242 342.69563550198467 0.012953623940548926 0.030214410719774414 5.076077998642532e-07 6.294471713188879 -0.15174798003742673 QETVADFT(ph)PK ddPTM_A549_PD325901_60min_R1 2 QETVADFTPK 10 0 O75400-2;O75400-3;O75400;F5H578 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 QETVADFT(1)PK;QETVADFT(1)PK 97.463 0.00054565 7417300.0 7415.299999999999 7993.799999999999 8026.1 7657.8 9139.7 7549.1 8028.5 8366.3 6873.4 8163.799999999999 8624.1 True False 8168.09579714466 8667.465580243543 8570.79941086008 8130.804913874352 8497.75900225329 7487.622632496132 8334.028960863774 8199.427583264616 6584.534900892357 7648.336274757174 7563.390372674181 1.0799516347397884 1.1459762293320574 1.1331954306927714 1.075021189339927 1.1235383318246925 0.9899823047013689 1.1018906271152997 1.0840941931132337 0.8705798030314107 1.0112311936707503 1.0 12.884817367970392 -8.720211396970125 11.696377414705445 0.9388969845425073 1.0924085522239972 0.5440396602512827 0.052433611774374035 0.3762524422347571 105.76994295932568 0.00996158717034394 0.011285696905506609 1.9045334425321953e-09 8.720211396970125 0.15351156768149 QETVADFT(ph)PKKEEEESQPAKK ddPTM_A549_MK2206_60min_R1 1 QETVADFTPKKEEEESQPAKK 21 3 O75400-2;O75400-3;O75400;F5H578 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 QET(0.044)VADFT(0.955)PKKEEEES(0.002)QPAKK 61.801 0.00044199 13064000.0 2109.2 1835.0 1825.2 1672.0 3411.0 2189.8 2008.0 2388.5 2789.7 2600.0 2885.4 True False 2465.1813950109595 1928.3936620812935 2084.04080532671 2081.6400750589332 2909.246418524378 2421.523182528404 2372.8276080269975 2727.077189474472 2157.8374042354853 2012.658194221576 2168.875547011204 1.136617266218007 0.8891213996758347 0.9608853805367488 0.9597784796492889 1.3413616205565293 1.1164878436041932 1.094035852493633 1.2573691437632242 0.9949106610607834 0.9279731135311559 1.0 11.082731556270243 -4.239210464152649 13.521875154648544 1.0410936636940957 1.0569528473934344 0.0 0.13728098597964827 0.0 0.0 0.01777648949726029 0.0 5.7648702337718515e-05 4.239210464152649 0.015859183699338697 QETVADFT(ph)PKKEEEESQPAKK ddPTM_A549_PD325901_60min_R1 1 QETVADFTPKKEEEESQPAKK 21 3 O75400-2;O75400-3;O75400;F5H578 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 QET(0.023)VADFT(0.968)PKKEEEES(0.009)QPAKK 48.983999999999995 0.0032990000000000003 5468300.0 1649.7 1772.9 1611.7 1607.2 1987.4 1532.6 1714.9 2017.4 1932.8 1482.0 1995.1 True False 1817.1763295550468 1922.3085049930914 1721.0796539394225 1706.473093783966 1847.811880157795 1520.1190137319097 1780.1614579292877 1977.1613743803152 1851.5711374930538 1388.4262670802977 1749.7153479809203 1.038555403684361 1.0986407058790075 0.9836340842100163 0.9752861205413478 1.0560642805643061 0.8687807508152954 1.0174006074665234 1.1299903019436022 1.0582127770838095 0.7935155102128291 1.0 10.772904521314521 -13.088827687243679 15.406514073767843 0.38315521737018743 1.0247452691234484 0.0 0.09602247301788105 0.0 0.0 0.0 0.008554502208859182 8.150275941249338e-14 13.088827687243679 0.641590051753261 QEVGS(ph)HGR ddPTM_A549_MK2206_60min_R1 2 QEVGSHGR 8 0 Q5T5C7;P49591 Q5T5C7 SARS Serine--tRNA ligase, cytoplasmic 1 QEVGS(1)HGR;QEVGS(1)HGR 43.419 0.021366999999999997 5067700.0 716.7 696.62 373.447 376.84 465.37 352.68 413.69 390.59000000000003 529.4300000000001 807.55 848.51 True False 837.6614383673209 732.0749824954069 426.40740008045384 469.16581691699054 396.9146894719111 390.0003635099633 488.8521181099047 445.95732863170804 409.51495032598285 625.1238941321669 637.8015493153383 1.3133574844189801 1.1478099783251834 0.6685581126891115 0.7355984277878074 0.6223169101705501 0.6114760365957366 0.7664643001176047 0.6992101682889144 0.6420726803902961 0.9801228843097347 1.0 9.316963791891146 -5.63494369846828 4.4776466557504095 0.7720610973924926 1.2765816050481331 0.68015019632679 0.1285253104194315 0.10825094249616805 3.6195354529743367 0.02190498485601216 0.09391580740013337 2.317695094324521e-06 5.63494369846828 0.5045205076556405 QEVNPVRQEIESETT(ph)SEEQIQEEK ddPTM_A549_MK2206_60min_R1 1 QEVNPVRQEIESETTSEEQIQEEK 24 1 D6RGZ6;P13611-2;P13611-5;P13611 D6RGZ6 VCAN Versican core protein 1 QEVNPVRQEIES(0.005)ET(0.084)T(0.456)S(0.456)EEQIQEEK 78.976 8.5687e-06 16289000.0 816.83 1038.2 890.69 899.39 1483.6 1118.2 584.2 952.63 1379.6 1422.2 1292.1 True False 954.6909344238576 1091.0399454892636 1017.0032352051546 1119.740590375152 1265.3644053130356 1236.527181798913 690.3415779927149 1087.6682198070198 1067.1228027684967 1100.9240322392027 971.2359098541548 0.9829650291320245 1.1233521479380835 1.047122768924259 1.1529027901607316 1.3028393951198205 1.273148129360863 0.7107867110230507 1.1198805653410704 1.0987266759203136 1.1335289614698476 1.0 9.923677953636398 QEVNPVRQEIESETT(ph)SEEQIQEEK ddPTM_A549_PD325901_60min_R1 2 QEVNPVRQEIESETTSEEQIQEEK 24 1 D6RGZ6;P13611-2;P13611-5;P13611 D6RGZ6 VCAN Versican core protein 1 QEVNPVRQEIES(0.004)ET(0.11)T(0.806)S(0.079)EEQIQEEK;QEVNPVRQEIES(0.022)ET(0.124)T(0.73)S(0.124)EEQIQEEK 98.29 2.1494e-08 33734000.0 3696.6000000000004 4068.5 3739.3 3385.1000000000004 3781.0 3149.3 3691.2000000000003 4385.9 4515.0 3658.7 4020.3 True False 4071.87611070691 4411.36677340199 3993.0713842375603 3594.189938880103 3515.4356037418847 3123.6531449470867 3831.6706359021455 4298.4197838280115 4325.250251335441 3427.6890576023507 3525.828586781463 1.1548706950679937 1.2511574697478094 1.132519998053172 1.019388733858172 0.9970523288969457 0.8859344883236367 1.0867433119883656 1.2191233005322601 1.2267329919415415 0.9721655415844539 1.0 11.783746622334482 -11.198866926635711 1.647244453927862 1.0002252136999843 1.1224137405406527 0.1507789216730805 0.10559910928552603 0.6783508945288201 3.3218874056470065 0.08796829719687223 0.018535262629409133 6.326056601187163e-12 11.198866926635711 0.12218852684066839 QEVNPVRQEIESETTS(ph)EEQIQEEK ddPTM_A549_MK2206_60min_R1 1 QEVNPVRQEIESETTSEEQIQEEK 24 1 D6RGZ6;P13611-2;P13611-5;P13611 D6RGZ6 VCAN Versican core protein 1 QEVNPVRQEIES(0.001)ET(0.016)T(0.131)S(0.853)EEQIQEEK 124.5 6.2895e-17 18044000.0 1065.1 1633.3 1465.1 1085.9 1774.3 1290.7 1402.3 1145.7 2002.9 1919.2 1617.0 True False 1244.8628408051259 1716.4279936116495 1672.8732105435918 1351.945548747904 1513.3028204009972 1427.2810173026812 1657.079758334791 1308.1064835590962 1549.246347974068 1485.6513870577126 1215.4542730703258 1.024195536094099 1.4121699447201972 1.3763357845768993 1.1122965122602195 1.2450512157716014 1.1742778390973654 1.3633419167212988 1.0762284625111598 1.2746233094072383 1.2223013403086314 1.0 10.247279903034407 -10.952970010094338 0.6586117346640312 0.9546287335847531 1.239693326220009 0.0 0.1369292809721226 1.0201125985725594 0.5741309880490935 0.17626598115109351 0.022466048173170418 1.114371483088385e-11 10.952970010094338 0.28506459263525585 QEVSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 QEVSSPR 7 0 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 QEVS(0.141)S(0.859)PR 54.191 0.048355 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QEWDNT(ph)VTDLTVHRATPEDLVR ddPTM_A549_PD325901_60min_R1 1 QEWDNTVTDLTVHRATPEDLVR 22 1 Q8N0Z3;C9IZF0;C9J5T2 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 QEWDNT(0.298)VT(0.254)DLT(0.224)VHRAT(0.224)PEDLVR 46.306999999999995 0.006614 2508700.0 1018.3 1292.5 1249.8 1214.3 1380.2 1376.1 1213.1 1175.0 1591.7 1229.3 1354.2 True False 1121.677066367161 1401.423511029145 1334.6189436579323 1289.304553124608 1283.2595134315125 1364.8934978445016 1259.2651843337917 1151.5637032303325 1524.8063842858512 1151.68178820635 1187.6419849810848 0.9444572358942207 1.1800050257161168 1.1237552735045724 1.0856003487828383 1.0805103976279102 1.1492465870228055 1.0603070624468094 0.9696219212464715 1.2838939710523423 0.9697213493380267 1.0 10.213884285501905 QEWDNTVTDLTVHRAT(ph)PEDLVR ddPTM_A549_MK2206_60min_R1 2 QEWDNTVTDLTVHRATPEDLVR 22 1 Q8N0Z3;C9IZF0;C9J5T2 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 QEWDNT(0.005)VT(0.013)DLT(0.196)VHRAT(0.786)PEDLVR;QEWDNTVT(0.002)DLT(0.108)VHRAT(0.89)PEDLVR 56.533 0.0027377 6881300.0 2817.0 2905.6000000000004 2964.5 2295.1000000000004 3965.7 3375.3 3397.7 3350.3999999999996 4782.3 4080.8 4394.0 True False 3292.4407309623875 3053.482629178968 3384.9106768524175 2857.399603030956 3382.350783331023 3732.472005657193 4015.018109458827 3825.329460169674 3699.116685763836 3158.9444457613126 3302.848531769332 0.9968488410210657 0.9244997461458583 1.0248458699494538 0.8651318931359684 1.0240708136618974 1.1300766504292925 1.2156228391460586 1.1581910049385309 1.119977695066211 0.9564303101932046 1.0 11.689495093984021 -6.997381019098662 24.70016943792841 1.0839846286680657 0.9545329431623697 0.42859081028304846 0.07699337964687124 61.031644649449994 575586.2227790741 0.011707247476813006 0.022031567668125165 1.0060486460090598e-07 6.997381019098662 -0.12945168550569597 QEYDESGPS(ph)IVHR ddPTM_A549_MK2206_60min_R1 2 QEYDESGPSIVHR 13 0 P60709;P63261;Q6S8J3;A5A3E0;P0CG38;P0CG39;A0A2R8YFE2;Q9BYX7 P60709 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;POTEKP Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed 1 QEYDES(0.01)GPS(0.99)IVHR;QEYDES(0.001)GPS(0.999)IVHR 85.619 8.789799999999999e-05 15492900.0 489.31 415.69 525.74 378.15999999999997 583.37 199.848 448.91999999999996 588.19 543.14 475.03999999999996 506.98 True False 571.893565519065 436.84684544445383 600.2978374931322 470.8092169762474 497.55704578556623 220.99578271163404 530.4829530853982 671.5677337563282 420.11965721635363 367.72813407039155 381.08287406381805 1.5007065508362174 1.1463303002467051 1.575242232986317 1.235450997720258 1.3056400054919362 0.5799152828752545 1.3920409160044303 1.7622616482205495 1.1024364667355748 0.9649558117083213 1.0 8.573960964394573 -13.352364241769603 0.0580318816949613 1.163123011093529e-10 1.8129653549396005 0.13704660607898078 0.2906335784537196 300.6163645269992 1.8226771581070822 51.90387149371404 14.994333061625472 4.4425851259771816e-14 13.352364241769603 1.8129653548232882 QEYDESGPS(ph)IVHR ddPTM_A549_PD325901_60min_R1 2 QEYDESGPSIVHR 13 0 P60709;P63261;Q6S8J3;A5A3E0;P0CG38;P0CG39;A0A2R8YFE2;Q9BYX7 P60709 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;POTEKP Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed 1 QEYDES(0.001)GPS(0.999)IVHR;QEYDESGPS(1)IVHR 113.01 8.5223e-06 21865000.0 704.92 607.6999999999999 648.6800000000001 368.65999999999997 674.05 400.21000000000004 553.15 563.73 753.52 750.69 619.3299999999999 True False 776.4829594653231 658.9130117233356 692.7033256297229 391.43129091239217 626.7070533462617 396.9508224492024 574.2004259452943 552.4859629123703 721.8521748363855 703.2913052864435 543.1563362563396 1.4295754419752664 1.2131185217590192 1.275329549507097 0.7206604522195215 1.1538244360100602 0.7308224095941757 1.057154980282332 1.0171766875083044 1.328995220440016 1.294822978838507 1.0 9.085223697342705 -5.551148804951685 1.8514619530513419 1.08899890612723 1.427247816246307 0.2438812126757407 0.19319486585269394 0.634813375531698 3.3008967752186993 0.0289279328275047 0.3033498544040182 2.8109375368064066e-06 5.551148804951685 0.3382489101190769 QEYDESGPSIVHR ddPTM_A549_MK2206_60min_R1 2 QEYDESGPSIVHR 13 0 P60709;P63261;Q6S8J3;A5A3E0;P0CG38;P0CG39;A0A2R8YFE2;Q9BYX7 P60709 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;POTEKP Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed 0 ; 157.28 2.2338e-18 49414000.0 3343.6 3777.7000000000003 3335.8999999999996 3551.9 4027.3 3145.1000000000004 3096.8999999999996 3223.3 4806.299999999999 4393.2 4717.9 False True 3907.9179368284827 3969.9687941386946 3808.980781552363 4422.1156594508475 3434.88950493205 3477.912394451585 3659.5666430770943 3680.21264594225 3717.680724083957 3400.773068790091 3546.3152225840995 1.1019657564396923 1.1194630327435728 1.074067177473543 1.2469606850765447 0.9685798608813864 0.980711576992112 1.0319349559711366 1.0377567742724754 1.0483221289547375 0.9589596116929628 1.0 11.792105063946236 -6.785482600886293 24.999477598482468 1.018791367934705 1.1300643990961128 0.6117079312884572 0.049553584965110344 120.84638771994236 125652.47872227349 0.006544910912763812 0.012373248096502738 1.638767713821861e-07 6.785482600886293 0.11127303116140785 QEYDESGPSIVHR ddPTM_A549_PD325901_60min_R1 2 QEYDESGPSIVHR 13 0 P60709;P63261;Q6S8J3;A5A3E0;P0CG38;P0CG39;A0A2R8YFE2;Q9BYX7 P60709 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;POTEKP Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed 0 ; 215.93 1.2325e-37 59178000.0 5187.6 6014.299999999999 5300.2 5437.700000000001 6273.9 5294.3 5674.4 6310.0 5853.6 6362.0 6292.299999999999 False True 5714.24133309072 6521.146168187683 5659.9034446917685 5773.5743790872775 5833.242907780004 5251.184976119573 5890.342397150823 6184.1420999007605 5607.593548442329 5960.302234254289 5518.386990176103 1.0354912301843417 1.181712369900245 1.0256445324997314 1.046243112229255 1.057055787889543 0.9515796890409813 1.0674029218387329 1.1206430630743807 1.016165332084363 1.0800805099143806 1.0 12.430030917364709 -2.0000000008227996 0.11879585644318896 0.9786737515914973 1.3424254371160338 0.0 0.059982154211185156 97.31494565634804 0.7677784900339015 0.19979981074578032 5.88764831791897 0.00999999998105434 2.0000000008227996 0.3637516855245365 QFLSVAEDT(ph)SDHRR ddPTM_A549_MK2206_60min_R1 1 QFLSVAEDTSDHRR 14 1 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 QFLSVAEDT(0.5)S(0.5)DHRR 58.21 0.0065260000000000006 4938100.0 963.17 849.1 1087.0 932.68 1379.7 938.73 773.71 997.98 1394.2 1259.6 1317.1 True False 1125.7295487543647 892.3155632006682 1241.1529450965013 1161.1866418695965 1176.7479576775386 1038.065785521457 914.2830919355425 1139.4467211855692 1078.4159260799063 975.0554851698074 990.0277198892551 1.1370687165004727 0.9013036153174407 1.2536547413393002 1.1728829592766223 1.1886010199887838 1.0485219400094934 0.9234924169979954 1.1509240582809421 1.0892785165657164 0.984876954030012 1.0 9.95132510970121 -7.377950781029339 8.74485592490872 1.0425262258781176 1.1270298660145717 0.1936639717904266 0.09826925894576305 0.48927349459673747 33.95053497796143 0.014614020735531634 0.02337501597274031 4.188410300457929e-08 7.377950781029339 0.08450364013645406 QFPPS(ph)PSAPK ddPTM_A549_MK2206_60min_R1 2 QFPPSPSAPK 10 0 O75381;O75381-2 O75381 PEX14 Peroxisomal membrane protein PEX14 1 QFPPS(0.967)PS(0.033)APK;QFPPS(0.842)PS(0.158)APK 109.24 0.00021876 5497100.0 3162.1 3019.8 3879.7000000000003 2944.8999999999996 3652.8 2810.8999999999996 3045.6000000000004 2997.0699999999997 5228.1 4501.2 4732.7 True False 3695.7851740774468 3173.494921391329 4429.899798611682 3666.400632201586 3115.4779588349015 3108.3475722755893 3598.9460971150525 3421.9138506419317 4043.9436975601507 3484.3757937808327 3557.4399741248817 1.0388889766120644 0.8920726546263085 1.2452493452686921 1.0306289519624314 0.8757640273610797 0.8737596684369164 1.011667413446767 0.9619034686547905 1.1367566921645522 0.9794615844889912 1.0 11.79662369854302 -8.738002308106081 24.975347828195694 1.0645795699082066 0.9906315168040674 0.023118768009849244 0.1058382961421433 443.1665589105733 472253.40735735843 0.018580609071823833 0.02106199012375609 1.828090500527673e-09 8.738002308106081 -0.07394805310413921 QFS(ph)ALVPAFDPRPGR ddPTM_A549_MK2206_60min_R1 2 QFSALVPAFDPRPGR 15 1 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 QFS(1)ALVPAFDPRPGR;QFS(1)ALVPAFDPRPGR 61.167 0.0014847999999999999 37237000.0 1474.0700000000002 1838.63 1654.9 1308.75 2414.3999999999996 1879.55 1763.4 1595.64 2496.2 2991.0 2910.7 True False 1722.8569784486072 1932.2084135763096 1889.5897045448035 1629.39380875202 2059.24495833634 2078.4427334556863 2083.7869541806813 1821.8268564425566 1930.8146856122949 2315.331022660283 2187.892858766727 0.7874503413388114 0.883136669985503 0.863657329916022 0.744731992804473 0.9412000912590833 0.9499746411838761 0.952417274836425 0.8326855902210336 0.8824996516057271 1.058246985624968 1.0 11.095326375667073 -14.999999999998511 0.10961674985311819 1.4123231031022663 0.7947623622138356 0.5068740007289645 0.06180247931590946 69.88428334342073 0.5428522480468616 6.532338965366666 0.31174487796452693 1.0000000000034277e-15 14.999999999998511 -0.6175607408884307 QFS(ph)ALVPAFDPRPGR ddPTM_A549_PD325901_60min_R1 2 QFSALVPAFDPRPGR 15 1 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 QFS(1)ALVPAFDPRPGR;QFS(1)ALVPAFDPRPGR 61.167 0.0014847999999999999 67273000.0 1907.1 2185.9 2779.0 1972.9899999999998 2528.2 2149.3 2479.1 3036.8999999999996 2855.4 3014.6 3137.7 True False 2100.7073880671837 2370.1134644167187 2967.599651484554 2094.8571113146018 2350.627953816512 2131.796813398144 2573.4435071155735 2976.3266470980366 2735.3974679209773 2824.257641525145 2751.7827915190887 0.7633986935820299 0.8613010706082387 1.0784280142424783 0.7612726984741993 0.8542200209482654 0.7746966148521159 0.9351913657745257 1.0815994112147895 0.9940455607002812 1.0263374166847112 1.0 11.426150881894873 -7.997341773938634 23.61519827200652 1.0036764103387168 0.8560441848525459 0.47555883076951866 0.08547171961128887 30.983414286385123 275242.0512780445 0.012912425549661285 0.017775066941516534 1.006139562025114e-08 7.997341773938634 -0.14763222548617094 QFS(ph)APNLK ddPTM_A549_MK2206_60min_R1 2 QFSAPNLK 8 0 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 QFS(1)APNLK;QFS(1)APNLK 98.04 0.0024446999999999997 36796000.0 6205.4 7705.5 7501.299999999999 6711.4 9320.3 7251.1 6053.4 7010.6 10496.8 10431.9 10924.8 True False 7252.719812536036 8097.677037148454 8565.097136202745 8355.693301286195 7949.296216526756 8018.406589109372 7153.224423521226 8004.374019062064 8119.291559945178 8075.326544730791 8211.870650858811 0.8831994707293076 0.986094080317934 1.043014131659148 1.0175139936492232 0.9680250157977592 0.97644092680281 0.8710834263777802 0.9747321115225984 0.9887261873877725 0.9833723505966646 1.0 13.003495187701121 -8.781332508428303 4.042534819155122 0.9949703181481185 0.9672831707945746 0.0525384992203517 0.047882832361244736 0.5089542002581325 18.08119238928946 0.008673698055088663 0.009394208087935913 1.6545027432226062e-09 8.781332508428303 -0.02768714735354394 QFS(ph)APNLK ddPTM_A549_PD325901_60min_R1 2 QFSAPNLK 8 0 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 QFS(1)APNLK;QFS(1)APNLK 96.015 0.0024955 57331000.0 10923.5 11298.099999999999 12115.3 10284.0 14585.1 9714.7 12695.6 13452.7 11704.099999999999 12809.1 12573.599999999999 True False 12032.445678544322 12250.230537685396 12937.517113217269 10919.219323341407 13560.692891863455 9635.586704098525 13178.73800529889 13184.375345061015 11212.217379104119 12000.331239985326 11027.126910617455 1.0911677879538049 1.110917706577792 1.1732446010719617 0.9902143515576891 1.2297575789035817 0.8738075459003661 1.1951198269614327 1.1956310516718962 1.0167850129944953 1.088255475542847 1.0 13.428769328979127 -8.953627287452528 21.00157027632916 1.007404947469325 1.1051586378545204 0.07731206310016514 0.09999769830536882 29.25676508125057 13249.868568472304 0.015457799786742008 0.016444679327594244 1.1126862275875618e-09 8.953627287452528 0.09775369038519544 QFS(ph)DASQLDFVK ddPTM_A549_MK2206_60min_R1 1 QFSDASQLDFVK 12 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QFS(0.86)DAS(0.14)QLDFVK 67.456 0.0047466 597080.0 970.22 1130.5 1078.6 981.2 1401.3 1152.7 929.79 1143.8 1302.6 1400.7 1463.6 True False 1133.9694163984122 1188.0376212440892 1231.5616987866476 1221.5940440477416 1195.1706262908847 1274.677948899666 1098.7208076032982 1305.9371527405906 1007.5631798247646 1084.2808971716013 1100.1477266949462 1.0307428619655226 1.0798891752593818 1.119451205418107 1.1103909178794045 1.0863728545632734 1.1586425331523813 0.9987029750123334 1.1870561753228133 0.9158435320788025 0.9855775464164146 1.0 10.10348154501247 -8.774050466834408 24.999998021345284 0.96025944126974 1.0955731973067295 0.537468856309328 0.05329777341001825 114.8331526997422 227642.40877083133 0.00917464029480028 0.009799080655866836 1.6824785386704652e-09 8.774050466834408 0.13531375603698947 QFS(ph)DASQLDFVK ddPTM_A549_PD325901_60min_R1 1 QFSDASQLDFVK 12 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QFS(0.929)DAS(0.071)QLDFVK 96.59100000000001 1.7630999999999998e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QFS(ph)DKR ddPTM_A549_MK2206_60min_R1 2 QFSDKR 6 1 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 QFS(1)DKR;QFS(1)DKR 80.219 0.017979 106133000.0 12349.7 13323.400000000001 13602.5 11014.900000000001 16914.5 12217.900000000001 12915.900000000001 12582.0 17322.9 17411.4 16694.9 True False 14434.02743882365 14001.504151157442 15531.539039259582 13713.550994477653 14426.39945650266 13510.790068414366 15262.55184388242 14365.537030758964 13399.29080898696 13478.152647257524 12549.095574200235 1.1502045986882639 1.1157381078476463 1.237662024918431 1.0927919795806982 1.149596747526729 1.0766345660950487 1.2162272375437795 1.1447468023347565 1.0677495226456515 1.0740337873406067 1.0 13.615295771005613 -9.138255881887499 1.1921002946928718 1.018477748125302 1.1486300716981876 0.43214192998051104 0.04945837474998698 0.1985374382536731 0.5836045927433928 0.010469142199310201 0.009427569049876837 7.273511303826162e-10 9.138255881887499 0.13015232357288564 QFS(ph)DKR ddPTM_A549_PD325901_60min_R1 2 QFSDKR 6 1 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 QFS(1)DKR;QFS(1)DKR 94.806 0.014933000000000002 165359000.0 12388.7 13193.3 13312.099999999999 9904.400000000001 15126.7 9953.5 14834.099999999999 14467.4 13068.099999999999 15216.1 12891.9 True False 13646.391703921081 14305.145692890379 14215.539158160316 10516.172293475556 14064.252776282035 9872.44199607241 15398.619793030986 14178.836357544253 12518.893202541889 14255.352849204128 11306.27802848741 1.2069747152455916 1.265239158001156 1.2573137793306253 0.9301179633986449 1.2439330379852331 0.8731823126229258 1.3619530453994206 1.2540675474120764 1.1072514908088376 1.2608351584213833 1.0 13.46483645887001 -14.99999999961287 0.14105179288582742 0.3856631078340161 1.2223677138473314 0.0 0.1626611638824351 85.16381464144172 0.8050755059887068 14.370093570571495 0.31926200007963906 1.0000000008914005e-15 14.99999999961287 0.8367046060133154 QFS(ph)DKRR ddPTM_A549_MK2206_60min_R1 3 QFSDKRR 7 2 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 QFS(1)DKRR;QFS(1)DKRR;QFS(1)DKRR 64.84100000000001 0.0083631 140179900.0 9456.4 9663.3 9699.400000000001 8352.9 11815.400000000001 9543.1 8687.7 8677.2 13009.5 13201.599999999999 12535.0 True False 11052.40913321716 10155.120694708536 11074.920768784743 10399.360874975935 10077.370311765735 10552.944507802908 10266.14263458972 9907.219672810506 10062.869021902558 10219.349391090605 9422.213551599583 1.1730161997167663 1.0777850278063936 1.1754054085204408 1.1037067689057487 1.0695332107023756 1.1200069336160783 1.0895680275519615 1.0514747536292663 1.0679941572958949 1.0846017589312327 1.0 13.201850315282046 -14.999974757181453 0.019827421930487824 0.03597382574575127 1.8442948979748854 0.3839269857941916 0.03808009598234376 815.0635877314143 1.255306170674841 76.38250157267365 42.69447730494566 1.0000581254269075e-15 14.999974757181453 1.808321072229134 QFS(ph)DKRR ddPTM_A549_PD325901_60min_R1 2 QFSDKRR 7 2 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 QFS(1)DKRR;QFS(1)DKRR 50.833999999999996 0.016817 261760000.0 11464.0 11188.4 12114.7 10663.3 13470.5 9244.7 11511.5 13154.5 12083.099999999999 11711.599999999999 11756.7 True False 12627.816840649257 12131.285733693212 12936.876393609176 11321.947822888611 12524.378550702198 9169.414228270514 11949.576431834506 12892.123177994388 11575.289327112125 10972.127577285833 10310.700431861702 1.224729292068975 1.176572417544555 1.254703933947317 1.098077467938259 1.214697161795127 0.8893105069695914 1.1589490462654135 1.2503634707643798 1.1226482045140835 1.0641495841912172 1.0 13.331854721494011 -14.99999999999335 0.09385352271105309 0.5022076493101213 1.2723130662121487 0.21427561781816673 0.09613307205150985 114.76317180283633 0.7817432835698943 11.397783953272484 0.8139024752664606 1.0000000000153138e-15 14.99999999999335 0.7701054169020274 QFS(ph)HTNAALEEVSR ddPTM_A549_MK2206_60min_R1 1 QFSHTNAALEEVSR 14 0 O95197-7;O95197-2;O95197 O95197-7 RTN3 Reticulon-3 1 QFS(0.961)HT(0.039)NAALEEVSR 73.928 0.00029481 2154400.0 446.67 456.54 420.32 420.93 812.0 499.02 380.96 378.0 551.62 603.96 570.17 True False 522.0569759669758 479.77593595999673 479.9276963044725 524.0578688962656 692.5558756498958 551.8259651773329 450.17550077388677 431.58265757644955 426.67895075613137 467.525016531563 428.5810531085389 1.2181055886172454 1.1194520440885953 1.1198061436069362 1.2227742339406382 1.6159274205584278 1.2875650035737394 1.050385913023269 1.007003586477143 0.9955618608461306 1.0908672073591676 1.0 8.743424261929755 -7.837103056009835 4.66161691879432 1.0001158946878819 1.2649229205493062 0.4539058586622998 0.12750289132077142 0.14051349282682934 5.701978793226298 0.020827799459974594 0.029279230907753397 1.4551137480562897e-08 7.837103056009835 0.26480702586142435 QFS(ph)HTNAALEEVSR ddPTM_A549_PD325901_60min_R1 2 QFSHTNAALEEVSR 14 0 O95197-7;O95197-2;O95197 O95197-7 RTN3 Reticulon-3 1 QFS(0.963)HT(0.037)NAALEEVSR;QFS(0.984)HT(0.016)NAALEEVSR 100.02 1.0064e-05 11826900.0 1828.16 2035.06 1732.5900000000001 1812.83 1762.5 1806.1100000000001 1892.5 1633.52 1647.4 2257.84 2303.51 True False 2013.7534573797384 2206.56164824369 1850.1739763100466 1924.8043918643523 1638.7080802949147 1791.401638973862 1964.5201231157366 1600.9381621283508 1578.165506987818 2115.279597074615 2020.192873152989 0.9968124747597984 1.0922529613718657 0.9158402650051983 0.9527824879711805 0.8111641725264197 0.8867478262993552 0.9724418639541274 0.7924679783815433 0.7811954630474056 1.0470681414558307 1.0 10.980277322123287 -5.868745593305981 5.222186843537527 0.8902402532122187 1.0435194806575445 0.2673490718532143 0.08517936892530086 0.18240323400652328 7.597684416594017 0.012532099441876427 0.040978130870872084 1.352864829949572e-06 5.868745593305981 0.15327922744532585 QFS(ph)LENVQEGEILHDAK ddPTM_A549_PD325901_60min_R1 1 QFSLENVQEGEILHDAK 17 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 QFS(1)LENVQEGEILHDAK 91.166 1.7057e-06 2185300.0 880.01 830.31 930.39 901.72 936.26 947.02 751.77 932.52 925.07 1145.8 1179.0 True False 969.3479673708775 900.2831376731988 993.5318602895693 957.4171964452952 870.500327521654 939.3077831034798 780.379018734329 913.9201570522117 886.1925249175806 1073.453992456549 1033.9904742967792 0.9374824927958207 0.8706880382872818 0.9608713861365832 0.9259439233194466 0.8418842814907792 0.9084298225690198 0.7547255396768211 0.883876766537692 0.8570606276815881 1.0381662299032388 1.0 10.014007179456037 -10.763535338417489 1.0016424583777832 1.0003143746960386 0.880533980602122 0.4715266654392699 0.05449795479034014 0.43531481734395455 0.7721671400858774 0.036985800075917626 0.009297216680079256 1.7237118273831925e-11 10.763535338417489 -0.11978039409391661 QFS(ph)PGPR ddPTM_A549_MK2206_60min_R1 2 QFSPGPR 7 0 Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9 Q5T321 NBEA Neurobeachin 1 QFS(1)PGPR;QFS(1)PGPR 68.625 0.022628 15040000.0 5326.9 5285.9 3796.7 3988.0 5103.7 2551.7 3033.3 3403.8 5823.0 5816.2 6000.1 True False 6225.9504897989145 5554.9297320956475 4335.129150550035 4965.060179028123 4352.9524908305075 2821.7192003186237 3584.411346328831 3886.299073700318 4504.099797420237 4502.316380473669 4510.109575664356 1.3804432875407042 1.2316618119588336 0.9612026222026887 1.100873514430467 0.9651544863384613 0.6256431585485313 0.7947503904715737 0.8616861760233068 0.9986674873097215 0.9982720607870066 1.0 12.138946769660965 -5.48289469790163 1.312648806061728 0.948426662838756 1.4878454061470383 0.5915771084093742 0.12369710789180997 0.5822895015360282 1.1391899049285075 0.020072620062880592 0.37400061109048577 3.289313762255868e-06 5.48289469790163 0.5394187433082823 QFSIQAEDERES(ph)T(ph)DDESNPLGR ddPTM_A549_PD325901_60min_R1 2 QFSIQAEDERESTDDESNPLGR 22 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 QFS(0.011)IQAEDERES(0.989)T(0.989)DDES(0.011)NPLGR;QFS(0.002)IQAEDERES(0.998)T(0.994)DDES(0.006)NPLGR 58.858000000000004 0.001376 8170900.0 2758.8999999999996 3236.8 2885.1 2795.5 3715.7 3178.5 2719.0 3182.8 3059.8999999999996 3432.0 3648.8 True False 3038.9814970051666 3509.576495550587 3080.9002355156813 2968.171685958857 3454.7220504691113 3152.615349828316 2822.4730328938904 3119.316557141702 2931.303044088882 3215.3029342912146 3200.0207316489295 0.9496755652077349 1.0967355495044393 0.9627750861251868 0.927547642614614 1.0795936464727018 0.9851859141561917 0.8820171085077647 0.9747801088570943 0.9160262666730972 1.0047756573859477 1.0 11.643865536446667 -7.530580383742421 24.79281248625388 0.9543662523719866 1.005041020832902 0.1350028476614633 0.05765695799174166 246.52112011242315 793588.4110943386 0.008743210921597667 0.0129821988849377 2.9472679151009837e-08 7.530580383742421 0.05067476846091534 QFSIQAEDERES(ph)TDDESNPLGR ddPTM_A549_MK2206_60min_R1 3 QFSIQAEDERESTDDESNPLGR 22 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 QFSIQAEDERES(0.984)T(0.016)DDESNPLGR;QFSIQAEDERES(0.986)T(0.014)DDESNPLGR;QFSIQAEDERES(0.979)T(0.021)DDESNPLGR 308.86 1.0548999999999997e-175 57493600.0 6444.4 7039.1 7126.2 6266.6 8381.7 7082.5 5764.5 6672.2 9085.7 10049.3 10101.5 True False 7532.057169547045 7397.360123572988 8136.802315866317 7801.917281318369 7148.763033170848 7831.965449016997 6811.835033103399 7618.004782755523 7027.80345688151 7779.156150458035 7593.018762782866 0.9919713627556639 0.9742317719312248 1.07161625304402 1.0275119191802102 0.9414915538218429 1.031469260606246 0.8971181615527628 1.0032906569512412 0.9255611867217087 1.0245142799577316 1.0 12.890457857818058 -6.7518592077346264 24.9889982494387 0.9656170831361585 1.0172744324460226 0.14280873307795516 0.04556339200784222 229.75794011191772 599298.1279803242 0.006178956695633864 0.01273271170776547 1.7706828961900156e-07 6.7518592077346264 0.0516573493098641 QFSIQAEDEREST(ph)DDESNPLGR ddPTM_A549_MK2206_60min_R1 2 QFSIQAEDERESTDDESNPLGR 22 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 QFSIQAEDERES(0.268)T(0.731)DDESNPLGR;QFSIQAEDERES(0.444)T(0.556)DDESNPLGR 176.09 7.708299999999999e-41 37150000.0 2208.13 2659.7 2604.1 2027.52 3192.7 2615.5 2427.9 2727.2 3366.2 3720.8 3491.7 True False 2580.8083604046797 2795.067369502788 2973.4005375582346 2524.262491018832 2723.058059344114 2892.270473971612 2869.0180027533597 3113.7889516997184 2603.761074716814 2880.26869579217 2624.614523982473 0.9833094867160439 1.0649439542312968 1.132890377001545 0.9617650393813368 1.0375078071320991 1.1019791468588727 1.0931197616021875 1.1863795324027215 0.9920546620941436 1.0974063693824945 1.0 11.357889834992946 QFSIQAEDEREST(ph)DDESNPLGR ddPTM_A549_PD325901_60min_R1 1 QFSIQAEDERESTDDESNPLGR 22 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 QFSIQAEDERES(0.046)T(0.954)DDESNPLGR 258.4 9.920799999999998e-111 44946000.0 8361.2 9049.8 8392.7 7369.5 9545.5 9457.2 8743.6 8699.8 10295.0 10330.0 10337.0 True False 9210.022868809885 9812.458406275868 8962.279091404971 7824.697277651161 8875.05701018729 9380.183698724673 9076.342482681512 8526.275664138933 9862.33695182687 9677.76203707117 9065.614531641912 1.0159292386262335 1.0823820461400857 0.9886013860531719 0.8631182420497199 0.9789801870805874 1.0346991553617038 1.0011833672170989 0.9405071916944503 1.087883994780954 1.067524104768923 1.0 13.146189104047094 -8.762725438802418 24.99998321531657 1.0415007724152907 0.9888388967748009 0.19774551259944606 0.05602725481023244 53.460130245574646 1039220.6229897373 0.01071605852779686 0.011719461068238552 1.726929312566083e-09 8.762725438802418 -0.05266187564048985 QFSNISFSRDS(ph)PEENVQSNK ddPTM_A549_MK2206_60min_R1 2 QFSNISFSRDSPEENVQSNK 20 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 QFSNIS(0.002)FS(0.042)RDS(0.956)PEENVQSNK;QFSNIS(0.007)FS(0.04)RDS(0.953)PEENVQSNK 95.71 5.0053e-07 11109200.0 3138.0 3893.0 2823.0 3650.0 4805.4 3669.8 3039.3 3831.9 5847.7 5468.7 5737.1 True False 3667.617683265878 4091.1370716525744 3223.343849132864 4544.250163854724 4098.532025674887 4058.1358001839153 3591.5014686635736 4375.08355970158 4523.205286858033 4233.316871822898 4312.419734095095 0.8504779009030019 0.9486871232192443 0.7474559639100716 1.053758781392896 0.950401927083035 0.9410345120395527 0.8328274356663947 1.0145310126264029 1.0488787190858102 0.9816569658916108 1.0 12.074281889196634 -8.372890622119975 7.863598992018036 1.023458599206698 0.9083894753326721 0.3123130189634259 0.07598881165696698 0.23378352590212312 14.959485556480287 0.011821764208307304 0.014293573663514724 4.2374967476214625e-09 8.372890622119975 -0.1150691238740259 QFSNISFSRDS(ph)PEENVQSNK ddPTM_A549_PD325901_60min_R1 2 QFSNISFSRDSPEENVQSNK 20 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;H7C269 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 QFSNIS(0.006)FS(0.034)RDS(0.959)PEENVQSNK;QFSNISFSRDS(1)PEENVQSNK 145.14 1.6782e-21 16401400.0 5054.0 5591.3 5283.799999999999 5846.5 7164.8 5915.0 6064.0 6032.700000000001 6225.6 5887.6 6063.4 True False 5567.078359441848 6062.498473669053 5642.390442070557 6207.625026635116 6661.569165218153 5866.8302011119995 6294.768838348127 5912.373065938407 5963.95968210718 5515.8559312159005 5317.64023905945 1.0469076712919032 1.14007307774197 1.0610703598610773 1.1673646105350446 1.2527303212968781 1.1032770058453008 1.1837522952589785 1.1118414936216425 1.1215425290150969 1.0372751226569454 1.0 12.376570460714085 -10.368670135619844 0.6576364697239957 0.9953575385369238 1.1370582905401605 0.3834147037026736 0.05498090756875084 0.5650576915296666 0.42909163068077344 0.04241968748457143 0.011464236270796697 4.2788776097231255e-11 10.368670135619844 0.14170075200323673 QFSQARPLT(ph)R ddPTM_A549_MK2206_60min_R1 2 QFSQARPLTR 10 1 Q86UU1-2;Q86UU1;A0A087WZL0 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 QFSQARPLT(1)R;QFSQARPLT(1)R 59.11600000000001 0.0038963 18436100.0 2884.5 3368.7 3323.1000000000004 2726.3 3760.1000000000004 2570.7 2681.4 2488.1 3344.3 4034.8 3328.4 True False 3371.333080745833 3540.1524411189384 3794.365549080209 3394.2436223882582 3206.99427097435 2842.729767707445 3168.575671396209 2840.795794486679 2586.8213897497008 3123.3358777096983 2501.8664208331916 1.3475272111542569 1.4150045788375738 1.516613963673 1.3566845912012682 1.2818407266948852 1.1362436235747295 1.2664847511486983 1.1354706113928394 1.0339566366170008 1.2484023334345484 1.0 11.288789048128208 -7.618335839849106 0.5569420365769413 1.0019137813186776 1.4472595226479559 0.5958175270406973 0.09693187763086487 0.20369119639612135 0.12681176882391676 0.01574034480486629 0.03642681389237488 2.4080425695949716e-08 7.618335839849106 0.4453457413292783 QFSQARPLT(ph)R ddPTM_A549_PD325901_60min_R1 2 QFSQARPLTR 10 1 Q86UU1-2;Q86UU1;A0A087WZL0 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 QFSQARPLT(1)R;QFSQARPLT(1)R 61.11 0.0030413 13594400.0 4673.1 5299.4 4799.0 5742.4 5854.0 4430.0 5338.0 5424.6 5409.5 5446.2 5541.3 True False 5147.509671845607 5745.999036245918 5124.688998731329 6097.095006063367 5442.835235203648 4393.923548761822 5541.140511065683 5316.402097483626 5182.157527042982 5102.32600254569 4859.755229194865 1.059211715216039 1.1823638774494165 1.0545158669607226 1.2546094851516827 1.1199813526627727 0.9041450323187945 1.1402097944722427 1.0939649934518236 1.06634126260337 1.0499141956561078 1.0 12.246667936246313 -7.023584909615765 24.798678153030657 1.0373480647627606 1.1414733475728513 0.26809143527463386 0.07551210117696046 623.1605901340395 655230.6742425098 0.010618256379884526 0.018467226997057953 9.471419891404997e-08 7.023584909615765 0.1041252828100907 QFSQYIK ddPTM_A549_MK2206_60min_R1 1 QFSQYIK 7 0 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 94.302 0.033348 2610000.0 2177.8 3590.5 2988.0 3249.4 4315.2 3595.4 3113.6 3150.8 5340.0 3920.4 3918.3 False True 2545.359397901984 3773.2411137345416 3411.7433302192717 4045.5031458711087 3680.4397963108718 3975.8628415666344 3679.3008169087934 3597.435548920313 4130.49852622773 3034.778917163951 2945.277970421434 0.8642170360367627 1.2811154504356124 1.1583773635230403 1.3735556326088454 1.2496069414406563 1.3499109019573239 1.2492202277200781 1.2214247976076646 1.4024138189023647 1.0303879456001603 1.0 11.52418808429467 -2.1678604424215475 17.569736070137964 1.211308016316555 0.006023198675219943 0.0 0.1625347514136279 0.0 0.0 0.0230048645072277 0.0 0.006794219251573109 2.1678604424215475 -1.205284817641335 QFSQYIK ddPTM_A549_PD325901_60min_R1 1 QFSQYIK 7 0 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 98.39200000000001 0.031911 5070900.0 5197.5 4793.1 5381.2 4383.1 5954.0 5331.3 5830.8 5204.8 5439.6 5641.4 5683.8 False True 5725.146373802727 5197.031358385911 5746.400591784338 4653.8341322576525 5535.811580184918 5287.883660386882 6052.694284736191 5100.98618091339 5210.992528718549 5285.201041232651 4984.728632576791 1.1485372215424265 1.0425906285894189 1.152801088153481 0.9336183522295202 1.110554252443478 1.060816756569029 1.2142475008930083 1.0233227437050072 1.045391417029816 1.0602785890273299 1.0 12.283299251453638 -8.453515713553546 24.99992378517461 1.0221136666770583 1.0902660375853235 0.149899260996899 0.06958011098728935 206.5549138548592 74446.54474994709 0.01065493931161374 0.012881192128201619 3.5195268801467885e-09 8.453515713553546 0.0681523709082652 QFTPCQLLADHANS(ph)PNKK ddPTM_A549_MK2206_60min_R1 1 QFTPCQLLADHANSPNKK 18 1 A0A2R8Y4F5;H0YFD6;P40939 A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase 1 QFTPCQLLADHANS(1)PNKK 120.67 6.631199999999999e-11 10062000.0 2538.7 2378.3 2798.0 2797.2 3467.6 3139.9 2501.3 2415.9 3993.0 3420.5 3274.7 True False 2967.1704947441303 2499.3453114593704 3194.7984732106843 3482.5141255710782 2957.5206335019434 3472.1621339030635 2955.753832648371 2758.361223383453 3088.591875510733 2647.806674359579 2461.5016128777957 1.2054310585135657 1.0153742326974675 1.2979063090986869 1.4147925426299415 1.2015107436977224 1.4105869830585576 1.2007929701060542 1.1206010221372928 1.2547592328813437 1.0756875642522818 1.0 11.265322969548716 -10.837564040363498 0.5916057235526128 0.9550171944241767 1.2428441147103455 0.3137391471137839 0.11140708702684145 1.0875341997578813 0.5043704180659165 0.17299408121446644 0.023967234300776446 1.4535700287128231e-11 10.837564040363498 0.28782692028616885 QFTPCQLLADHANS(ph)PNKK ddPTM_A549_PD325901_60min_R1 1 QFTPCQLLADHANSPNKK 18 1 A0A2R8Y4F5;H0YFD6;P40939 A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase 1 QFTPCQLLADHANS(1)PNKK 145.83 1.8174000000000002e-17 19927000.0 4041.2 4977.8 4719.3 4136.1 4567.3 4000.2 4472.4 4827.1 3594.8 4597.1 4627.7 True False 4451.459649025795 5397.296675590617 5039.580077456297 4391.577503235356 4246.508604329625 3967.6236974620833 4642.599629391188 4730.819703713307 3443.7230572537387 4306.838321454008 4058.5222374073 1.0968178535519162 1.3298674640350288 1.2417278464083825 1.08206318614157 1.0463189200220857 0.9776030449932226 1.1439138084794658 1.165650802676269 0.8485164933958049 1.0611838668168392 1.0 11.986738802995 -7.051802659899229 0.5145736510853052 0.9387160373570974 1.2538093036323086 0.24576277487202403 0.10830765902221104 0.7818197206181403 0.35457760163927926 0.02716227704001084 0.1089266343929415 8.875592205651348e-08 7.051802659899229 0.31509326627521117 QFVPIKVEQIEAGT(ph)PGR ddPTM_A549_MK2206_60min_R1 2 QFVPIKVEQIEAGTPGR 17 1 E2QRB9;E9PIR7;F8W809;A0A087WSW9;A0A182DWI3;A0A087WSY9;Q16881-7;Q16881-5;Q16881-2;Q16881-4;Q16881-3;Q16881-6;Q16881 E2QRB9 TXNRD1 Thioredoxin reductase 1, cytoplasmic 1 QFVPIKVEQIEAGT(1)PGR;QFVPIKVEQIEAGT(1)PGR 94.837 1.3102000000000002e-06 5767600.0 3402.6 4376.0 4357.5 3956.8 5167.5 4282.2 3675.9 4809.0 5519.9 5425.5 5813.5 True False 3976.8756944169754 4598.719708592777 4975.459023236435 4926.216177627502 4407.367595345855 4735.339561705691 4343.763448379701 5490.69047694483 4269.651463468995 4199.875781826602 4369.847505562362 0.910071962317867 1.05237532951415 1.1385887074785088 1.1273199285231212 1.008586132521955 1.083639544784594 0.9940308998999487 1.2564947563858353 0.9770710437913844 0.9611035113881197 1.0 12.093367219580726 QFVPIKVEQIEAGT(ph)PGR ddPTM_A549_PD325901_60min_R1 2 QFVPIKVEQIEAGTPGR 17 1 E2QRB9;E9PIR7;F8W809;A0A087WSW9;A0A182DWI3;A0A087WSY9;Q16881-7;Q16881-5;Q16881-2;Q16881-4;Q16881-3;Q16881-6;Q16881 E2QRB9 TXNRD1 Thioredoxin reductase 1, cytoplasmic 1 QFVPIKVEQIEAGT(1)PGR;QFVPIKVEQIEAGT(1)PGR 92.336 1.9144e-06 8678400.0 5743.8 6621.200000000001 7114.9 5768.4 8140.799999999999 7019.8 6841.7 6519.700000000001 7089.3 7210.1 7016.1 True False 6326.906347637924 7179.191761103424 7597.75989936936 6124.700967013087 7569.018292235368 6962.633076207275 7102.064637421895 6389.659468894295 6791.361374704835 6754.853055516634 6153.164178722334 1.0282362316150104 1.1667479613056804 1.2347728223541383 0.9953742154633752 1.2301017935469791 1.1315532747011834 1.1542134146169645 1.0384347440280828 1.1037185385349197 1.097785279137349 1.0 12.587112771702643 -10.276485746115643 0.39023352704218456 0.97592203176319 1.1376589838173667 0.0825828850823136 0.07791546488802008 1.6567884633513126 0.4069907869354646 0.10881923575551426 0.02412935725780145 5.2907136146025123e-11 10.276485746115643 0.1617369520541767 QFVPIKVEQIEAGTPGR ddPTM_A549_MK2206_60min_R1 2 QFVPIKVEQIEAGTPGR 17 1 E2QRB9;E9PIR7;F8W809;A0A087WSW9;A0A182DWI3;A0A087WSY9;Q16881-7;Q16881-5;Q16881-2;Q16881-4;Q16881-3;Q16881-6;Q16881 E2QRB9 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ; 99.021 7.6322e-07 3236300.0 1796.6 1688.0 2294.6 2152.9 3114.7 2124.2 1878.0 2079.3 3199.2 3420.3 3709.6 False True 2099.8221573471865 1773.91198996906 2620.0087836416124 2680.3605966473547 2656.53175601814 2348.98143407016 2219.2082907742533 2374.0471425891856 2474.586308072613 2647.6518544984847 2788.403940248411 0.7530552252627069 0.6361746819978411 0.9396087653671166 0.9612526212427347 0.9527069294635545 0.8424107426346902 0.7958704471549952 0.8514000099919844 0.8874561796280346 0.9495223472760597 1.0 11.445223856047908 -2.000000000217958 0.038277577196082976 1.393724699802111 2.1460375877876612e-13 0.30966558415195544 0.08623462003764364 576.3901758640633 1.6362438661166447 16.56215425768572 52.62941884824387 0.009999999994981329 2.000000000217958 -1.3937246998018964 QFVPIKVEQIEAGTPGR ddPTM_A549_PD325901_60min_R1 1 QFVPIKVEQIEAGTPGR 17 1 E2QRB9;E9PIR7;F8W809;A0A087WSW9;A0A182DWI3;A0A087WSY9;Q16881-7;Q16881-5;Q16881-2;Q16881-4;Q16881-3;Q16881-6;Q16881 E2QRB9 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 88.133 7.4787e-06 6980500.0 2350.9 2683.5 2618.6 2331.4 3067.4 3021.5 2682.1 2806.2 3288.8 2792.5 3217.4 False True 2589.561637358891 2909.6479627440685 2796.3139429209973 2475.4052830064315 2851.9564059555278 2996.8939057751318 2784.1687832014363 2750.2281395786854 3150.5831731100748 2616.18107342897 2821.6801967790148 0.9177374673128832 1.0311756683360043 0.9910102307529488 0.8772805953814821 1.0107298513882168 1.0620955235097604 0.986706001048454 0.9746774785881501 1.116562811301758 0.9271713627984403 1.0 11.462338769880816 -7.460725108426192 1.005613463019347 1.0491717892941284 0.9640003573174841 0.0 0.06624267503346591 0.559809738034822 1.1295878495142273 0.01113282401249663 0.022499059955823825 3.461584133568774e-08 7.460725108426192 -0.08517143197664423 QGAEGAPS(ph)PNYDDDDDERADDTLFMMK ddPTM_A549_PD325901_60min_R1 1 QGAEGAPSPNYDDDDDERADDTLFMMK 27 1 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 QGAEGAPS(0.931)PNY(0.043)DDDDDERADDT(0.026)LFMMK 43.438 0.011028 5269900.0 1371.5 1401.8 1427.1 1336.0 1830.2 1245.1 1303.5 1002.8 1076.6 1558.3 1652.9 True False 1510.7336703550625 1519.934605617528 1523.9515878494433 1418.5216857238543 1701.6530658472345 1234.9603184115895 1353.1054058025693 982.798367318619 1031.35424597735 1459.9086720588575 1449.6037785963927 1.042170069270832 1.0485172762789254 1.051288366069961 0.9785582147815355 1.1738746069597676 0.8519295663035343 0.9334312077419805 0.6779772389047114 0.7114732047511486 1.0071087655914106 1.0 10.501442905751569 -7.288208806899311 22.554601913224246 0.8501653761131291 1.0534216101153082 0.4547013632454724 0.10581754911611096 174.5451394934363 147062.71088274836 0.01874685207309504 0.029977948844891966 5.1498098443052945e-08 7.288208806899311 0.20325623400217907 QGAIYHGLATLLNQPS(ph)PMMQR ddPTM_A549_MK2206_60min_R1 4 QGAIYHGLATLLNQPSPMMQR 21 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR 118.52 2.5188000000000002e-15 69497000.0 14013.4 14605.4 14490.9 13206.6 19594.4 16086.4 15285.000000000002 15319.899999999998 21807.399999999998 20095.899999999998 20626.500000000004 True False 16378.51932526387 15348.752475292704 16545.927518030265 16442.217592866797 16712.08971654473 17788.652170711895 18062.0866477553 17491.54274022607 16868.0587192619 15556.222232791306 15504.370787560343 1.0563807812442723 0.9899629391995387 1.067178265067396 1.0604891883815704 1.0778953848261537 1.147331447012626 1.164967407916166 1.128168500347018 1.0879550644387121 1.0033443114810285 1.0 13.920387357929142 -4.106374561871566 13.572881469100665 1.0631834163109457 0.46529847058120366 0.0 0.0568071731148877 0.0 0.0 0.008447759050911857 0.0 7.827542568693777e-05 4.106374561871566 -0.597884945729742 QGAIYHGLATLLNQPS(ph)PMMQR ddPTM_A549_PD325901_60min_R1 4 QGAIYHGLATLLNQPSPMMQR 21 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR 118.52 2.5188000000000002e-15 142859600.0 23055.6 25077.500000000004 25336.300000000003 25120.1 29082.8 26021.300000000003 26588.2 28494.5 28969.1 28509.9 28856.399999999998 True False 25396.18753936433 27190.8689344939 27055.773677548787 26671.711525113613 27040.12445821328 25809.39116013453 27600.028500621316 27926.154843997178 27751.629469758915 26709.78004847003 25307.24573579101 1.0035144797858242 1.0744301935646423 1.069091988911496 1.0539160129698704 1.0684736197891156 1.019841962637339 1.0905978781241974 1.1034845567766527 1.0965882956797195 1.0554202668801478 1.0 14.627262882670301 -5.247582100463686 23.000716505744638 1.0559922491718456 1.0035143701334066 0.21025321948812203 0.03047363602936812 1277.8858884276801 2120954.651495409 0.005537202192356239 0.13978309518855475 5.654808466166317e-06 5.247582100463686 -0.052477879038439035 QGDDEQS(ph)DWFYEK ddPTM_A549_MK2206_60min_R1 4 QGDDEQSDWFYEK 13 0 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 QGDDEQS(1)DWFYEK;QGDDEQS(1)DWFYEK;QGDDEQS(1)DWFYEK;QGDDEQS(1)DWFYEK 170.49 1.153e-21 29306700.0 14360.7 12773.0 10231.199999999999 9747.9 18641.6 14349.3 13514.7 14127.3 19105.6 19542.4 19627.9 True False 16784.435074594097 13423.091142105928 11682.138005401408 12136.135937599862 15899.445334378199 15867.733401705545 15970.146052889664 16129.888038041732 14778.212105373872 15127.758267213745 14753.750727518272 1.1376385154243016 0.909808725253136 0.7918080101226205 0.8225797061193321 1.0776544641440233 1.0755050491743434 1.0824465146413655 1.093273726521401 1.0016579768973577 1.0253499972042963 1.0 13.848794145421534 -6.770573663473878 24.999801077953492 1.0243790022022072 0.9062229659135894 0.31917043591213823 0.08961281219955353 197.95524021621432 541788.7630774525 0.013351662417184615 0.025484079299265758 1.6960019080953235e-07 6.770573663473878 -0.11815603628861782 QGDDEQS(ph)DWFYEK ddPTM_A549_PD325901_60min_R1 2 QGDDEQSDWFYEK 13 0 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 QGDDEQS(1)DWFYEK;QGDDEQS(1)DWFYEK 205.42 4.9956e-31 51038000.0 11484.3 11644.8 10423.0 8799.6 9321.9 8125.7 9897.599999999999 8409.9 13750.7 11464.3 13089.5 True False 12650.177681705176 12626.148163429152 11130.367458590676 9343.131306658408 8667.16190280917 8059.526993267245 10274.258584174535 8242.157947061074 13172.805898347335 10740.442141490315 11479.574481177011 1.1019726996368722 1.0998794584356912 0.9695801422640771 0.8138917798720052 0.7550072450002971 0.7020754128545795 0.8950034342319199 0.7179846222153696 1.147499493116814 0.9356132632878817 1.0 13.486781545493944 -8.778034955871455 24.98950732057789 1.0696525399998544 0.8800540387865265 0.16184311552573005 0.13903721176122472 243.3185628728993 366386.066222823 0.0258265306184986 0.027531362467277828 1.6671130231098247e-09 8.778034955871455 -0.18959850121332789 QGDDS(ph)S(ph)DEEDKER ddPTM_A549_MK2206_60min_R1 2 QGDDSSDEEDKER 13 1 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 2 QGDDS(1)S(1)DEEDKER;QGDDS(1)S(1)DEEDKER 90.70700000000001 0.00058101 11433800.0 2940.4 3324.2 3019.9 2943.1000000000004 905.4100000000001 200.81 0.0 97.758 554.78 4552.299999999999 4460.7 True False 3436.667634122046 3493.387581193809 3448.1672298959743 3664.159632120781 772.2253883893743 222.0595809131101 0.0 111.615495871319 429.12321580161404 3523.932268290338 3352.985080942983 1.0249576276538421 1.0418738815895177 1.0283872867475516 1.0928052298670785 0.23030981938404452 0.06622742885890168 0.0 0.033288396213182254 0.12798244115089494 1.0509835812628425 1.0 11.711230348558038 -6.752605389746927 24.968079462252526 0.4306283965092216 1.045309656031474 0.47001331329821305 0.34638695106262374 178.50128593833813 504505.7475122807 0.061023218393323246 0.12553845948524966 1.7676432137195025e-07 6.752605389746927 0.6146812595222525 QGDDS(ph)S(ph)DEEDKER ddPTM_A549_PD325901_60min_R1 4 QGDDSSDEEDKER 13 1 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 2 QGDDS(1)S(1)DEEDKER;QGDDS(1)S(1)DEEDKER;QGDDS(1)S(1)DEEDKER;QGDDS(1)S(1)DEEDKER 134.4 8.2317e-08 116789000.0 14311.0 15321.5 15686.300000000001 12410.699999999999 17981.3 10976.0 15618.2 16939.3 17215.0 17000.0 18125.7 True False 15763.84218479862 16612.696575808925 16750.866647384726 13177.280752255265 16718.35552011742 10886.615095081206 16212.559147606973 16601.43237287623 16491.513416775102 15926.617098761846 15896.353808279158 0.9916640240221928 1.0450633381824126 1.0537552730274864 0.8289498907222521 1.051710079037757 0.6848498231972684 1.019891689826577 1.0443547352494036 1.0374400076693042 1.0019037881798356 1.0 13.956408267954833 QGDDS(ph)SDEEDKER ddPTM_A549_MK2206_60min_R1 1 QGDDSSDEEDKER 13 1 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 1 QGDDS(0.979)S(0.021)DEEDKER 57.136 0.011798000000000001 3021000.0 349.63 349.85 397.42 251.25 0.0 0.0 174.7 0.0 119.13 330.03 385.72 True False 408.6389963671921 367.65587066983136 453.7801319597531 312.8062612790412 0.0 0.0 206.44072864657196 0.0 92.1472452115186 255.47599378421043 289.93507866956486 1.4094155086108517 1.2680627413450851 1.5651094515435306 1.0788838063832296 0.0 0.0 0.7120239799677696 0.0 0.31782027078047215 0.8811489625764567 1.0 8.179586082542881 -6.551721261107208 8.570470047058338 0.5300279641582489 1.3872799034571723 0.6177501403830976 0.34530195465766883 0.15347953567309486 40.83271442561818 0.058324870540044656 0.12232366460149874 2.807234799372491e-07 6.551721261107208 0.8572519392989234 QGDDS(ph)SDEEDKER ddPTM_A549_PD325901_60min_R1 6 QGDDSSDEEDKER 13 1 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 1 QGDDS(0.902)S(0.098)DEEDKER;QGDDS(0.751)S(0.249)DEEDKER;QGDDS(0.981)S(0.019)DEEDKER;QGDDS(0.934)S(0.066)DEEDKER;QGDDS(0.976)S(0.024)DEEDKER;QGDDS(0.942)S(0.058)DEEDKER 126.8 1.5423e-07 129859400.0 11045.54 11500.7 11126.41 9310.43 13511.939999999999 10270.53 11967.58 11244.310000000001 11605.42 11976.26 11120.12 True False 12166.875089503215 12469.904350710167 11881.515091138626 9885.514115579304 12562.90794806244 10186.890208863373 12423.01280581106 11020.033416059456 11117.684556335174 11220.07689971869 9752.41573624861 1.2475755154982102 1.2786477410269708 1.218315073154275 1.013647734359394 1.2881842086948319 1.0445504462037927 1.273839543123264 1.129979864896372 1.1399928855588075 1.1504920630090607 1.0 13.251543912654663 -14.999999995073617 0.1041155247922271 0.38969345933829125 1.3019248883765449 0.1399277029392717 0.09532590970742666 66.9168723993478 0.4980142199717632 8.748721221400354 0.4798427211999365 1.0000000113434158e-15 14.999999995073617 0.9122314290382536 QGDDSS(ph)DEEDKER ddPTM_A549_MK2206_60min_R1 3 QGDDSSDEEDKER 13 1 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 1 QGDDS(0.419)S(0.581)DEEDKER;QGDDS(0.35)S(0.65)DEEDKER;QGDDS(0.349)S(0.651)DEEDKER 139.08 1.7412e-09 62623600.0 9606.119999999999 10179.46 8760.36 8785.61 4096.5 1861.1399999999999 1446.49 1952.76 2581.69 14172.0 14355.8 True False 11227.398208914601 10697.551034010929 10002.71077654608 10938.084844401019 3493.910276600735 2058.084599475255 1709.2985093301654 2229.569710076688 1996.9413371117732 10970.535357118531 10790.858660076057 1.0404545701681414 0.9913530860699392 0.9269615228632397 1.013643602327002 0.3237842683944587 0.19072482221361511 0.1584024555575189 0.2066165242554454 0.18505861303698126 1.0166508248048176 1.0 13.39752204839256 -6.751072368221994 24.54761188557565 0.4908727520070105 0.9882539455126322 0.4456186663485556 0.293204391000762 169.63713613078872 401672.9099846279 0.05258535868399981 0.10849247095159392 1.7738938652499126e-07 6.751072368221994 0.4973811935056217 QGDETPSTNNGS(ph)DDEK ddPTM_A549_MK2206_60min_R1 2 QGDETPSTNNGSDDEK 16 0 Q9Y3P9;C9JGR5;B5MCD9;Q9Y3P9-4;Q9Y3P9-3 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 QGDETPST(0.001)NNGS(0.999)DDEK;QGDETPS(0.002)T(0.002)NNGS(0.997)DDEK 136.34 1.9171e-10 10097300.0 1062.61 981.99 1047.66 875.48 1577.9899999999998 1497.09 1259.96 1281.34 1513.55 1472.21 1551.42 True False 1241.9525896797807 1031.9690965815855 1196.2339415453548 1089.9726393017902 1345.8697613507122 1655.5110701120866 1488.8784228135928 1462.973868939175 1170.7333416426934 1139.6367385057495 1166.159596986249 1.0649936705828313 0.8849295578825942 1.0257892184198698 0.9346684983073057 1.1541042622544078 1.419626502573479 1.2767364146908866 1.2545228566655837 1.0039220572109209 0.9772562361540877 1.0 10.187549529482013 -4.826359741837033 19.03620901280149 1.0596530576574523 11.8560646072827 0.0 0.16077969187429456 37116.42741846203 3938682.654021697 0.02366859444673664 562638.8157557969 1.4915583859356369e-05 4.826359741837033 10.796411549625248 QGDETPSTNNGS(ph)DDEK ddPTM_A549_PD325901_60min_R1 2 QGDETPSTNNGSDDEK 16 0 Q9Y3P9;C9JGR5;B5MCD9;Q9Y3P9-4;Q9Y3P9-3 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 QGDETPSTNNGS(1)DDEK;QGDETPS(0.001)T(0.02)NNGS(0.979)DDEK 191.35 1.3787999999999999e-34 11168900.0 2626.0 2955.3999999999996 3478.7999999999997 2419.0 3702.1 1980.94 3063.84 2755.8 2691.6000000000004 3047.2 2860.3999999999996 True False 2892.5895868409734 3204.4619299772035 3714.892287723805 2568.416136052397 3442.077267551662 1964.8078814185649 3180.436107797581 2700.8334071167237 2578.481412291133 2854.7992719615945 2508.588933569557 1.153074363094239 1.2773961836056835 1.4808692799412768 1.0238489461873332 1.3721168986637489 0.7832323004880567 1.2678187586804146 1.0766345059465823 1.0278612720427351 1.1380099918958835 1.0 11.29266036956336 -7.239469678786826 24.916970762009104 1.0256044205424344 1.2613350769842138 0.3138815311143268 0.1543778541003544 602.8710623284081 683747.5335494673 0.020257402197933348 0.035068714407198755 5.761430418343898e-08 7.239469678786826 0.23573065644177937 QGEDLAHVQHPTGAGPHAQEEDS(ph)QEEEEEDEEAASR ddPTM_A549_PD325901_60min_R1 3 QGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASR 36 0 Q9NW97 Q9NW97 TMEM51 Transmembrane protein 51 1 QGEDLAHVQHPTGAGPHAQEEDS(1)QEEEEEDEEAASR;QGEDLAHVQHPTGAGPHAQEEDS(1)QEEEEEDEEAASR;QGEDLAHVQHPTGAGPHAQEEDS(1)QEEEEEDEEAASR 182.3 2.4016999999999992e-77 41443000.0 2701.9 3130.71 2967.9300000000003 2933.06 3994.0299999999997 3257.3 3575.37 3113.5099999999998 2929.42 3610.59 3747.2 True False 2976.194898966348 3394.5459189277003 3169.351577412935 3114.2284547374306 3713.5031114554886 3230.773628754375 3711.4326618675345 3051.4086005486547 2806.3066647324604 3382.616731212855 3286.3181554579223 0.905632004626052 1.032932831926219 0.9644080175710532 0.9476344977631929 1.129988922493124 0.9830982503592055 1.1293589014513343 0.9285189248888975 0.8539363908122353 1.0293028767147818 1.0 11.682256442090127 QGEDNS(ph)TAQDTEELEK ddPTM_A549_MK2206_60min_R1 2 QGEDNSTAQDTEELEK 16 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 QGEDNS(0.986)T(0.014)AQDTEELEK;QGEDNS(0.979)T(0.021)AQDTEELEK 158.64 2.5369999999999997e-20 5550400.0 1996.6399999999999 1712.12 1944.47 1550.45 2915.7 1971.8899999999999 2283.09 2240.05 3173.9 2962.3999999999996 2670.3 True False 2333.624018838744 1799.2595949442098 2220.2250847762602 1930.3103196023442 2486.804392404435 2180.554090965353 2697.8979002043607 2557.583947365414 2455.0167176768155 2293.191782523847 2007.190813469196 1.1626318749463318 0.8964068502457914 1.1061355352353668 0.9616974662543554 1.2389476753863191 1.086371099515207 1.3441163052860718 1.274210668065448 1.2231107781096329 1.142488181559745 1.0 10.970962057595962 -5.980386956160518 24.742341578226032 1.133508673436106 1.022457264254437 0.11633681496828319 0.12376018370313356 399.75470247043387 504293.45290588314 0.018909362518250823 0.05877926193270665 1.04619597257575e-06 5.980386956160518 -0.111051409181669 QGEDNS(ph)TAQDTEELEK ddPTM_A549_PD325901_60min_R1 2 QGEDNSTAQDTEELEK 16 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 QGEDNS(0.976)T(0.024)AQDTEELEK;QGEDNS(0.966)T(0.034)AQDTEELEK 148.44 1.4479e-14 8069000.0 2522.4 2856.0 2838.7 2391.5 2762.4 1930.86 2512.8999999999996 2653.3999999999996 2251.6 2851.5 2568.6 True False 2778.4721911072625 3096.68514313287 3031.3512524898156 2539.217523509431 2568.37855376265 1915.1357163345917 2608.5297846116437 2600.475855447967 2156.973082149918 2671.4558033599656 2252.6784836969528 1.233408234337734 1.3746680520740746 1.3456652933067281 1.1271992616284188 1.1401443092525083 0.8501593681454234 1.1579680826580678 1.1543928147172744 0.9575148418916981 1.1859019485886606 1.0 11.137425702506988 -6.594913979300381 1.7003971853184539 1.001689196234698 1.3252431402152263 0.4595353370165638 0.10989203795803874 0.16108944499117805 0.9268719300635809 0.014135546026807643 0.038646464696219004 2.5414760458105293e-07 6.594913979300381 0.32355394398052817 QGEDNS(ph)TAQDTEELEKEIR ddPTM_A549_PD325901_60min_R1 1 QGEDNSTAQDTEELEKEIR 19 1 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 QGEDNS(0.578)T(0.421)AQDT(0.001)EELEKEIR 54.223 0.0029948 1315100.0 306.87 394.51 275.46 212.1 407.76 340.29 375.47 560.77 563.94 517.26 525.35 True False 338.0232164942459 427.7567422329656 294.1543720755433 225.20093528595027 379.12034429563363 337.5187910627899 389.75871631506766 549.5850024344452 540.2395629541769 484.6001153238562 460.7352804680346 0.7336603703342784 0.9284219385119196 0.6384455120882618 0.4887859576483518 0.8228593736310077 0.7325655433200684 0.8459493614622567 1.1928433218227898 1.1725595713125734 1.0517972811449965 1.0 8.847794265267204 -8.066319176090209 3.806454073073209 1.0916328202802594 0.7257079304044864 0.7078451329825053 0.11387250989405327 0.10836551654155932 3.082073596670528 0.02027190168802641 0.02692455466779 8.583824385351585e-09 8.066319176090209 -0.365924889875773 QGEVPES(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 QGEVPESPEAR 11 0 H7BYP4;U5Y3L1;Q9H930-3;Q9H930-1;Q9H930-2;Q9H930 H7BYP4 SP140L Nuclear body protein SP140-like protein 1 QGEVPES(1)PEAR 52.101000000000006 0.023351 6163000.0 1373.2 1995.7 1458.7 918.48 1177.9 870.78 1192.5 1409.9 1304.9 1783.6 1518.1 True False 1512.6062531035893 2163.8846429097584 1557.6961538756814 975.2124235805733 1095.1683675343995 863.6886563861893 1237.881240061039 1381.7784384548468 1250.0595909119854 1670.9831916089197 1331.3833240287881 1.13611626779763 1.6252904808525073 1.1699832240365358 0.7324805756388507 0.8225793036226425 0.648715242859324 0.9297707262211982 1.0378516941864362 0.9389178671168001 1.255072946649577 1.0 10.378710287960475 -6.006112910545346 9.096565732630783 0.9267407984285402 1.3855128925169249 0.49281645425758724 0.18371467006869469 0.062004616218724114 62.64667193996355 0.02125357872265334 0.061584980789479916 9.86023099966009e-07 6.006112910545346 0.4587720940883847 QGGAS(ph)QSDKTPEELFHPLGADSQV ddPTM_A549_MK2206_60min_R1 1 QGGASQSDKTPEELFHPLGADSQV 24 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 QGGAS(0.618)QS(0.371)DKT(0.01)PEELFHPLGADSQV 108.32 1.5369000000000002e-11 5822800.0 888.25 841.32 893.05 958.46 961.57 1146.0 802.89 1045.2 1543.8 1388.6 1743.5 True False 1038.1648843725034 884.1395944317356 1019.697918692209 1193.2827430269047 820.1243267840769 1267.2689593467674 948.7647202235042 1193.3603007907552 1194.131764942016 1074.9142955754162 1310.5408318479358 0.7921652337292177 0.6746371978239315 0.7780741308566311 0.910526947370506 0.6257907474944185 0.9669816678354441 0.7239489966029468 0.910586127338017 0.9111747882423651 0.8202066425200404 1.0 10.35594658833745 -8.492145297132076 0.32771632909635945 1.0127924052250534 0.727702421619664 0.17187328254282508 0.10574075185438664 0.7443186351436586 0.2338942499032992 0.061391171897226114 0.07096300391179086 3.2199913339428595e-09 8.492145297132076 -0.2850899836053894 QGGAS(ph)QSDKTPEELFHPLGADSQV ddPTM_A549_PD325901_60min_R1 1 QGGASQSDKTPEELFHPLGADSQV 24 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 QGGAS(0.633)QS(0.346)DKT(0.021)PEELFHPLGADSQV 110.08 1.0319e-11 12819000.0 1354.1 1657.2 1805.6 1795.7 2278.7 1888.4 1290.7 2293.9 1710.2 1854.2 1839.1 True False 1491.5672351642663 1796.8580599439053 1928.1388739548431 1906.6163106694048 2118.651973088237 1873.0214964970255 1339.8182947981413 2248.1463649702614 1638.3262413807013 1737.125495560249 1612.9023590154427 0.9247721827840574 1.1140525958687009 1.1954467442975463 1.1821027478893718 1.3135649292381946 1.1612739519088844 0.8306877891951259 1.3938514953518872 1.0157628155375618 1.0770183860482636 1.0 10.655443388730372 -8.953741570696108 24.999840353935944 1.006953334314671 1.1423125167111756 0.08835800816983208 0.15001670896156608 166.45379487813497 89958.3408551551 0.024530881886282257 0.026106552178923607 1.1123934661851537e-09 8.953741570696108 0.13535918239650457 QGGASQS(ph)DKTPEELFHPLGADSQV ddPTM_A549_PD325901_60min_R1 1 QGGASQSDKTPEELFHPLGADSQV 24 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 QGGAS(0.15)QS(0.7)DKT(0.15)PEELFHPLGADSQV 103.95 2.7890999999999996e-11 14112000.0 1292.7 1470.2 1495.9 1398.6 2162.2 1800.2 1418.3 1755.2 1852.5 1875.8 2342.8 True False 1423.9339523645567 1594.0989136673481 1597.4207695774533 1484.9883455489387 2010.334531185057 1785.539768054407 1472.2741826235401 1720.1911590722361 1774.6458672422807 1757.3616678739688 2054.650452232819 0.6930297807187332 0.7758492019579375 0.7774659518564399 0.7227450021657844 0.9784314061792829 0.8690236171870668 0.7165570090151334 0.8372183975151972 0.8637215470464802 0.855309313544899 1.0 11.004677260698429 -14.999999999748981 0.07594848664646094 1.6929496204579897 0.5836448978848016 0.27065157499840253 0.08262395278377527 94.11382769782601 0.5311327577093183 11.065568525627508 1.2692371360941639 1.0000000005779922e-15 14.999999999748981 -1.1093047225731882 QGGASQSDKT(ph)PEELFHPLGADSQV ddPTM_A549_MK2206_60min_R1 1 QGGASQSDKTPEELFHPLGADSQV 24 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 QGGAS(0.316)QS(0.281)DKT(0.403)PEELFHPLGADSQV 50.757 0.0032464 8588000.0 741.97 1013.0 994.52 965.15 1167.6 964.92 1236.7 1219.4 1328.1 1568.9 1844.6 True False 867.1963965751381 1064.5573731271659 1135.5578904851636 1201.6117933272305 995.8475867103668 1067.0271939379425 1461.3923818959101 1392.253684255881 1027.2874705398965 1214.4844003516278 1386.5349116298837 0.6254414434871614 0.7677825954456275 0.8189897570990878 0.8666293096902447 0.7182275601987832 0.7695638854730623 1.0539888823845271 1.0041245067672149 0.7409027078390051 0.875913321882383 1.0 10.437268227185315 -7.588375273642788 24.999887058533027 0.8986581765945956 0.7666175675796789 0.41670151316456305 0.09813900168876886 68.82715682790867 26270.511716737663 0.018729360270579073 0.027780131923050944 2.5800298246739932e-08 7.588375273642788 -0.13204060901491665 QGGASQSDKTPEELFHPLGADS(ph)QV ddPTM_A549_MK2206_60min_R1 2 QGGASQSDKTPEELFHPLGADSQV 24 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 QGGASQSDKTPEELFHPLGADS(1)QV;QGGASQSDKTPEELFHPLGADS(1)QV 131.1 3.9542000000000004e-23 19060200.0 3379.2 4035.7 3636.8999999999996 3102.1000000000004 4785.5 2991.5 3085.0 3211.3999999999996 5283.3 5054.4 5320.700000000001 True False 3949.5263464920486 4241.099892131596 4152.667107655442 3862.1146392585597 4081.5592893135163 3308.0585444030144 3645.504567113193 3666.625784500026 4086.6409856964337 3912.6075295667474 3999.423346150452 0.9875239514950498 1.0604278479830758 1.0383164642103946 0.9656678738388484 1.0205369464680758 0.827133878584548 0.91150754786239 0.9167886135458123 1.0218075537389486 0.9782929164857561 1.0 11.965576285756542 -4.841504157103966 15.948118869383174 0.9900238171308137 0.15296961962408673 0.0 0.06614161580778483 5271.450562227932 536928.4286746653 0.00941563577987875 1980.7906353684116 1.4404422221441027e-05 4.841504157103966 -0.8370541975067269 QGGASQSDKTPEELFHPLGADS(ph)QV ddPTM_A549_PD325901_60min_R1 2 QGGASQSDKTPEELFHPLGADSQV 24 1 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 QGGASQSDKTPEELFHPLGADS(1)QV;QGGASQSDKTPEELFHPLGADS(1)QV 122.78 1.0419000000000001e-16 28173000.0 3204.0 3089.8 3660.5 3766.6000000000004 3626.4 3007.2 3607.1 4156.0 4071.4 3986.1000000000004 3869.0 True False 3529.2677213398647 3350.1882896540433 3908.9235423746663 3999.254327430742 3371.6941744008363 2982.7103602339826 3744.3701643808554 4073.105319681072 3900.2932166748856 3734.4169657279194 3393.1375276117383 1.0401192679696487 0.987342323260347 1.1520085792472916 1.178630189577261 0.9936803760424073 0.8790419887087114 1.1035126439500176 1.2003949991817542 1.149465114495406 1.1005793120199259 1.0 11.728404189919491 QGGS(ph)PDEPDSK ddPTM_A549_MK2206_60min_R1 2 QGGSPDEPDSK 11 0 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 QGGS(1)PDEPDSK;QGGS(0.998)PDEPDS(0.002)K 130.1 9.6748e-08 39507000.0 10396.1 12022.2 10670.5 10100.099999999999 8113.200000000001 5312.9 5575.2 5929.0 5901.5 15320.5 14858.099999999999 True False 12150.70751975793 12634.078629032012 12183.737351105998 12574.624953410714 6919.759027491055 5875.107551582402 6588.141673442292 6769.453906800977 4564.819672758977 11859.58840945065 11168.423707301306 1.0879518755914015 1.1312320306018244 1.0909093055934953 1.1259086584609168 0.6195824235220674 0.5260462627095333 0.5898900190485542 0.6061243810418365 0.4087255097399955 1.0618856089510194 1.0 13.447137960166213 -6.758318655873005 24.99055059567855 0.6750778574884253 1.109296288672058 0.5528300297158592 0.1821564744828411 55.882328161752696 447494.02572490525 0.03173148888988888 0.06391307275950163 1.744541656709627e-07 6.758318655873005 0.4342184311836328 QGGS(ph)PDEPDSK ddPTM_A549_PD325901_60min_R1 4 QGGSPDEPDSK 11 0 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 QGGS(1)PDEPDSK;QGGS(0.999)PDEPDS(0.001)K;QGGS(0.999)PDEPDS(0.001)K;QGGS(0.998)PDEPDS(0.002)K 125.47 3.0682e-06 91659000.0 23970.6 25275.9 25966.2 21375.9 29315.399999999998 21964.8 25984.6 26393.399999999998 26434.899999999998 28475.0 26795.600000000002 True False 26404.077665776957 27405.98879877876 27728.422479445202 22696.240794808804 27256.38743663972 21785.92595120623 26973.45817231871 25866.962931778235 25323.933082841 26677.083640426095 23499.911071303464 1.1235820248707182 1.1662167025068082 1.1799373365844485 0.9658011354146762 1.1598506630062706 0.9270641869708929 1.1478110742834646 1.1007259922513177 1.077618251660744 1.1351993443499615 1.0 14.520367676883033 -2.000000013318187 0.012816277878002259 8.407556193714776e-09 2.3660489931795334 0.0 0.08373552663252591 6247.349335911701 6.01613077545526 456.4752306204213 674.2275057736967 0.009999999693337416 2.000000013318187 2.3660489847719774 QGGVQPQAGDGAQT(ph)PKEEK ddPTM_A549_MK2206_60min_R1 1 QGGVQPQAGDGAQTPKEEK 19 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 QGGVQPQAGDGAQT(1)PKEEK 59.678000000000004 0.0013097999999999999 20354000.0 1037.8 1614.3 1667.2 1432.5 1855.2 1535.0 1256.3 1479.8 2008.0 2122.1 2091.3 True False 1212.9552682260435 1696.4609747672112 1903.6340294985166 1783.462564307369 1582.3025375685788 1697.4326811494655 1484.553448189401 1689.566181697434 1553.1912061170938 1642.7161361375408 1571.9724930562597 0.771613545137671 1.0791925318419018 1.210984312961758 1.134538022888636 1.0065713901216142 1.0798106764891817 0.9443889474828552 1.0748064544135543 0.9880524073912699 1.0450031049485733 1.0 10.618360257679392 -7.740668119787704 24.92825078708448 0.9981212634306668 1.0581553524820386 0.01698512862551249 0.10700052793647502 522.8712446909731 627512.9223156464 0.015770879223671912 0.023377852680329658 1.8169035781858404e-08 7.740668119787704 0.060034089051371864 QGHDS(ph)LEHDELR ddPTM_A549_MK2206_60min_R1 2 QGHDSLEHDELR 12 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 QGHDS(1)LEHDELR;QGHDS(1)LEHDELR 151.8 6.242e-13 64656000.0 1477.79 1375.69 1302.46 1047.17 2350.73 1432.0100000000002 1357.52 1380.93 2218.32 1719.65 2076.23 True False 1727.2048235033399 1445.7067449529243 1487.168412944241 1303.7266970092473 2004.9407309932021 1583.544347708694 1604.1638119764984 1576.6810564207583 1715.87406192912 1331.1798706512063 1560.6447899671016 1.1067251398953821 0.9263522066308245 0.9529192180724164 0.8353769579025923 1.2846874214314112 1.0146731388774732 1.0278852832426488 1.010275410879368 1.0994648320744982 0.8529678753352117 1.0 10.60792649522094 QGHDS(ph)LEHDELR ddPTM_A549_PD325901_60min_R1 2 QGHDSLEHDELR 12 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 QGHDS(1)LEHDELR;QGHDS(1)LEHDELR 134.88 1.2505e-08 60659000.0 2713.8 2461.8999999999996 2579.8 2099.7 3338.4 1643.6 1472.94 793.85 2944.7 2622.9 2431.3 True False 2989.30297820603 2669.3729530388005 2754.880741597643 2229.393700235312 3103.922300854776 1630.2150665338434 1528.993537723695 778.0160389867225 2820.944499470094 2457.289646373086 2132.265513280544 1.4019374977400971 1.2518951961718423 1.2919970446641 1.0455516380815697 1.4556922116511248 0.7645459987887328 0.717074645817115 0.36487765437322356 1.3229799393650559 1.1524313604793448 1.0 11.058171380753 -7.248928556516727 24.779679400180555 1.029897621872393 1.2739257953100995 0.2807004015075931 0.2721496355624878 1188.4312124392372 2353876.4865476573 0.04639926082642862 0.07999384829983278 5.637303844961375e-08 7.248928556516727 0.24402817343770655 QGHIPELQEY(ph)VKY(ph)K ddPTM_A549_MK2206_60min_R1 2 QGHIPELQEYVKYK 14 1 C9J956;A0A0C4DG46;Q8WXK1 C9J956 ASB15 Ankyrin repeat and SOCS box protein 15 2 QGHIPELQEY(1)VKY(1)K;QGHIPELQEY(1)VKY(1)K 42.001000000000005 0.020746 19456200.0 4165.2 4565.9 4185.8 3714.7000000000003 7770.5 4527.1 4130.4 4714.7 8678.2 8534.7 8040.2 True False 4868.183930637039 4798.2848074642925 4779.409381402885 4624.801666759219 6627.469743519108 5006.15471715423 4880.840215236408 5383.023163163197 6712.601556237728 6606.705342393419 6043.596441768732 0.8055110855833891 0.7939452697903859 0.7908220589269082 0.7652399876993963 1.0966102398424702 0.8283403376432457 0.807605249997131 0.8906986452569605 1.1106965233226598 1.0931744708718318 1.0 12.561191613117018 -8.640796218248125 5.22756409746383 1.0519250445575326 0.8442818122527668 0.5528846389744969 0.08874494995049462 0.12521467824042654 5.291120197871968 0.015814784946689194 0.01791948418843838 2.2866715147236015e-09 8.640796218248125 -0.20764323230476578 QGIAVMTPTVPGS(ph)PK ddPTM_A549_MK2206_60min_R1 4 QGIAVMTPTVPGSPK 15 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;E7EX50;H0Y7S5;Q9UPX8-2 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QGIAVMT(0.004)PT(0.021)VPGS(0.974)PK;QGIAVMT(0.001)PT(0.002)VPGS(0.997)PK;QGIAVMTPT(0.001)VPGS(0.999)PK;QGIAVMTPT(0.009)VPGS(0.99)PK 144.05 1.5086e-13 38988000.0 10031.4 11044.8 10672.6 10102.2 14963.399999999998 10358.9 10471.5 10318.4 14681.7 14176.0 15148.400000000001 True False 11724.455075816868 11606.933143844948 12186.13516268347 12577.239453504986 12762.303681896115 11455.071922318693 12374.03600470852 11781.06479877471 11356.318391857236 10973.631754340411 11386.6342054289 1.0296681938045311 1.0193471516201877 1.0702139844690353 1.1045616489118824 1.1208144085116325 1.006010355268738 1.0867158619013904 1.034639787862664 0.9973375966045164 0.963729189535958 1.0 13.475053740929539 -8.58455163281816 3.5306470714908538 0.9987537023179716 1.0628635500993155 0.46533278507723863 0.03468056413514172 0.16579114874889572 4.223085605827557 0.005776245588300935 0.006627561807524934 2.6028453634068455e-09 8.58455163281816 0.06410984778134399 QGIAVMTPTVPGS(ph)PK ddPTM_A549_PD325901_60min_R1 6 QGIAVMTPTVPGSPK 15 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;E7EX50;H0Y7S5;Q9UPX8-2 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QGIAVMT(0.006)PT(0.024)VPGS(0.969)PK;QGIAVMTPTVPGS(1)PK;QGIAVMT(0.208)PT(0.131)VPGS(0.661)PK;QGIAVMT(0.001)PT(0.007)VPGS(0.992)PK;QGIAVMT(0.002)PT(0.009)VPGS(0.988)PK;QGIAVMTPT(0.002)VPGS(0.998)PK 141.97 1.3988e-15 95847700.0 14364.699999999999 15458.9 13507.099999999999 12785.5 16482.9 14378.800000000003 15688.400000000001 16065.3 14086.9 15296.099999999999 17315.2 True False 15822.993769266777 16761.675756014258 14423.773030790577 13575.231297022716 15325.197966918035 14261.703820075943 16285.430647021882 15744.864988515954 13494.876581514322 14330.301635551246 15185.540170096341 1.0419776703383736 1.1037918683341719 0.9498360196099016 0.8939577482897397 1.0091967618706583 0.9391634186421873 1.0724301186922192 1.0368327245626103 0.8886662199931941 0.9436807301574134 1.0 13.890410607571363 -8.744330430903354 24.92857007497557 0.9474257050873511 1.0036644932541852 0.16208526503805398 0.062287511617691256 382.5300728278565 557364.4544500663 0.011973327849190009 0.013559819094874054 1.8016464450736247e-09 8.744330430903354 0.05623878816683403 QGIAVMTPTVPGS(ph)PKAPFLGIPR ddPTM_A549_PD325901_60min_R1 2 QGIAVMTPTVPGSPKAPFLGIPR 23 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;E7EX50;H0Y7S5;Q9UPX8-2 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QGIAVMT(0.002)PT(0.012)VPGS(0.986)PKAPFLGIPR;QGIAVMT(0.005)PT(0.034)VPGS(0.961)PKAPFLGIPR 73.34100000000001 2.9041e-05 11771100.0 5360.6 6066.1 7130.299999999999 7409.799999999999 7826.1 8176.3 8230.6 9784.5 8402.2 7464.3 7134.5 True False 5904.804165734857 6577.311535979805 7614.205035977076 7867.486517123216 7276.421734579303 8109.714923643626 8543.819986957136 9589.340471708247 8049.084753437568 6993.002824134592 6257.001729321775 0.9437114485782482 1.0511922196148649 1.2169095303738096 1.2573892189056513 1.162924680119599 1.2961023944806669 1.3654814808375064 1.532577564549863 1.2864124226972278 1.1176283988165998 1.0 12.611255787434132 -5.582631868607263 3.018366551064163 1.2045177163431877 0.9540115638362435 0.30846695452398587 0.13599253680858503 0.3363664340211901 5.792215586714743 0.024094771810916408 0.14069469083806346 2.6143765017533038e-06 5.582631868607263 -0.2505061525069442 QGKVT(ph)VK ddPTM_A549_MK2206_60min_R1 2 QGKVTVK 7 1 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B 1 QGKVT(1)VK;QGKVT(1)VK 70.1 0.0085216 110213000.0 14943.0 15141.8 14388.400000000001 11430.6 20077.1 16313.099999999999 17000.9 16929.5 21962.0 21954.0 23672.0 True False 17465.01307872594 15912.45294414307 16428.89147674931 14231.097513139135 17123.785185973553 18039.341414240607 20089.743466785952 19329.30846941932 16987.642066107383 16994.57615228481 17793.589086036336 0.9815340229718889 0.8942801178111108 0.9233039718581575 0.7997879148680074 0.9623570097733448 1.0138112848968244 1.129043914055065 1.0863074546656892 0.9547057641922603 0.9550954599497548 1.0 14.119069920754667 -6.9913961430691405 24.97361620414992 1.0012742309082756 0.8985279315539887 0.42741504019715026 0.06416395309406321 177.976227981667 516590.75330195157 0.00994260615758842 0.018768031389175353 1.0200086551600936e-07 6.9913961430691405 -0.10274629935428692 QGKVT(ph)VK ddPTM_A549_PD325901_60min_R1 2 QGKVTVK 7 1 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B 1 QGKVT(1)VK;QGKVT(1)VK 59.426 0.012015000000000001 142580000.0 37585.0 38698.0 41123.0 32198.0 41524.0 27720.0 31486.0 34313.0 39382.0 45107.0 41381.0 True False 41400.601531385364 41959.21627064283 43913.85407268772 34186.79733303642 38607.497490023256 27494.257510536703 32684.216959800284 33628.600296972225 37726.91149459406 42258.936321991234 36291.39933577186 1.140782727839801 1.1561752106175827 1.2100347431189442 0.9420082432406798 1.0638194778003078 0.7575970619417821 0.9006050347467305 0.9266272701649464 1.0395551614182934 1.1644339181029393 1.0 15.14734006535146 -6.261404612718047 24.999999997415127 0.9845109456669991 1.1677153312969666 0.4305099592652253 0.09920982771463521 2.159566249007906 1552024.1988945561 0.012665528912827326 0.03131056549700859 5.477663977015478e-07 6.261404612718047 0.18320438562996744 QGKVT(ph)VKYDR ddPTM_A549_PD325901_60min_R1 2 QGKVTVKYDR 10 2 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B 1 QGKVT(0.992)VKY(0.008)DR;QGKVT(0.991)VKY(0.009)DR 60.55 0.0027478000000000003 136627000.0 7181.5 8098.400000000001 8890.7 7151.5 9086.0 7268.1 9273.0 10791.3 10753.1 9348.5 8497.7 True False 7910.560593259126 8780.880589337268 9494.07636612224 7593.231912765079 8447.830704998347 7208.911003330875 9625.8890893803 10576.059055888918 10301.184601912537 8758.23411457501 7452.536771358558 1.0614587805404512 1.1782404916247813 1.2739388824768618 1.0188788255225036 1.1335510262042425 0.9673096858825332 1.291625842944422 1.4191220225218637 1.3822386816663348 1.175201731071557 1.0 12.863515873258372 -7.790847292840257 24.9989153007248 1.2143559331842886 1.1138517119449987 0.21652403595311598 0.13037266052487945 463.0671898525255 393639.83433268935 0.027400520933326795 0.03786233084181841 1.6186490889749223e-08 7.790847292840257 -0.10050422123928993 QGLAETAS(ph)PVAVSLR ddPTM_A549_MK2206_60min_R1 2 QGLAETASPVAVSLR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QGLAET(0.002)AS(0.998)PVAVSLR;QGLAET(0.001)AS(0.999)PVAVSLR 220.34 1.8222999999999997e-46 29196000.0 5454.5 5624.2 5864.1 4773.7 7707.1 6148.9 5237.6 6095.5 8895.2 9178.2 8791.900000000001 True False 6375.086250278433 5910.447757099516 6695.71755781085 5943.2567142995385 6573.395799533633 6799.57251669052 6189.2041234074695 6959.555791685845 6880.451402715521 7104.838245463261 6608.628585904141 0.9646609984825231 0.8943531445701445 1.0131780702720177 0.8993177082119873 0.9946686690116529 1.0288931248449418 0.9365338122660908 1.053101366073169 1.0411315015328844 1.07508511835837 1.0 12.690135201237393 -7.15144137015769 0.9725475242958885 1.0196334088184016 0.9414185156668082 0.38199172119794933 0.04551248069039769 0.42287872416777605 0.7835571152674702 0.006868175068424488 0.01712406234500392 7.056000937755616e-08 7.15144137015769 -0.07821489315159336 QGLAETAS(ph)PVAVSLR ddPTM_A549_PD325901_60min_R1 2 QGLAETASPVAVSLR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QGLAET(0.029)AS(0.971)PVAVSLR;QGLAET(0.01)AS(0.99)PVAVSLR 186.96 2.0153e-33 54235000.0 9180.3 10309.099999999999 8374.8 8218.3 10082.0 9404.5 9982.2 9755.9 9851.8 9864.7 9908.0 True False 10112.277297820337 11177.8840367896 8943.164289763523 8725.925725886496 9373.875101011816 9327.912870052032 10362.078083469434 9561.310921144503 9437.763106557353 9241.841158479765 8689.37881198685 1.1637514621724885 1.2863847092694243 1.0292064005112287 1.0042059294099632 1.0787739036167596 1.0734844310371572 1.1924992922595485 1.1003445848113835 1.0861263285631098 1.0635790380931263 1.0 13.085037329722638 -14.999996461044919 0.01876216531787779 1.1183737269429102e-08 1.8994493721932322 0.17879037987391178 0.0744163195374968 2640.2911057022857 3.8493045450908414 256.04356292075613 147.64078375748866 1.0000081487784154e-15 14.999996461044919 1.899449361009495 QGLKS(ph)PQESLSDLGAIESLR ddPTM_A549_MK2206_60min_R1 2 QGLKSPQESLSDLGAIESLR 20 1 Q96JG6;F8WDT1;F2Z3F0;A0A3B3IRQ5;C9JA29;Q96JG6-2 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 QGLKS(0.994)PQES(0.005)LS(0.001)DLGAIESLR;QGLKS(0.84)PQES(0.155)LS(0.005)DLGAIESLR 46.956 0.0050882 7286800.0 1185.62 1424.6100000000001 1528.45 1330.9099999999999 2124.09 1785.5700000000002 1394.4099999999999 1560.99 2063.29 2335.55 1788.0900000000001 True False 1385.7236703740236 1497.11656399871 1745.2071931304038 1656.9830097468196 1811.6391747650096 1974.5178322345616 1647.7562474646036 1782.265112831382 1595.9581093970812 1807.9476328900787 1344.0579042265424 1.0309999785101955 1.1138780251139906 1.2984613145329542 1.2328211489521759 1.3478877428331806 1.4690719990749406 1.2259562942065572 1.32603298356927 1.1874176732850645 1.3451411782221454 1.0 10.392379577794365 -9.885963786178369 0.841956215864686 1.020034388971522 1.258439296890789 0.0 0.14802474996738266 0.4080489041661159 0.5951567977712835 0.04706885273153712 0.02430032082594353 1.300277997721473e-10 9.885963786178369 0.23840490791926694 QGLSVS(ph)PFPK ddPTM_A549_MK2206_60min_R1 2 QGLSVSPFPK 10 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QGLS(0.002)VS(0.998)PFPK;QGLSVS(1)PFPK 119.45 5.8532e-05 16300400.0 4201.5 4260.9 4269.5 2989.3 5502.1 4281.4 4047.3 3603.1 6062.3 5472.1 6147.0 True False 4910.61048318725 4477.761610224626 4874.979299990352 3721.678634194777 4692.7483785877985 4734.4549062366905 4782.642020900234 4113.850459030966 4689.198729503814 4235.948809461495 4620.530251430605 1.0627807234173676 0.9691012430528346 1.0550692311734058 0.8054657001850543 1.0156298353711315 1.0246561863264096 1.0350851007672628 0.8903416350877128 1.0148616012311462 0.9167668165682855 1.0 12.173842709293147 QGLSVS(ph)PFPK ddPTM_A549_PD325901_60min_R1 2 QGLSVSPFPK 10 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QGLS(0.001)VS(0.999)PFPK;QGLSVS(1)PFPK 134.99 6.9839e-07 21555000.0 7327.200000000001 7316.5 7933.8 8111.400000000001 9693.5 7609.0 9080.7 9404.9 8888.2 9011.4 8354.3 True False 8071.05195000045 7933.087132258987 8472.235377815088 8612.422755674006 9012.662000759572 7547.034826755914 9426.271007649708 9217.311891498677 8514.6598635481 8442.418666104859 7326.774062271064 1.101583300017673 1.0827530731580912 1.1563391071989693 1.175472681766364 1.2300996214923456 1.0300624480314022 1.286551342723931 1.2580314082513973 1.1621294434878247 1.1522695519681387 1.0 12.838962412245145 -10.451663489722916 0.9203379958336703 1.005581265490844 1.1649134638429184 0.046940645234615164 0.08393148734866791 0.41947874379627226 0.6692600884337201 0.04060450618145796 0.013647635988061279 3.5345693754209984e-11 10.451663489722916 0.15933219835207435 QGNFFAS(ph)PMLK ddPTM_A549_MK2206_60min_R1 2 QGNFFASPMLK 11 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 QGNFFAS(1)PMLK;QGNFFAS(1)PMLK 70.089 0.0011439 18301100.0 7202.6 8400.3 9574.099999999999 8166.9 11545.5 8539.8 7725.9 8691.4 13851.400000000001 12086.2 12058.9 True False 8418.22279333678 8827.839389417704 10931.85134466275 10167.790866626072 9847.172244231368 9443.475967739547 9129.59602433057 9923.432566296178 10714.080016140595 9355.91902576955 9064.34232129113 0.9287185429397689 0.9739084289305904 1.2060280776229126 1.1217350918822941 1.0863636759504833 1.0418269338259516 1.0071989451331915 1.0947768977112815 1.1820030219924964 1.032167441844461 1.0 13.145986631246751 -5.546114870697387 22.75402308721752 1.0884142734343716 0.9400159444545152 0.4108726645061389 0.06297297871363867 58.10349388908676 56898.04539635978 0.010501187781869956 0.040680090207517366 2.8437088482400685e-06 5.546114870697387 -0.1483983289798564 QGNFFAS(ph)PMLK ddPTM_A549_PD325901_60min_R1 2 QGNFFASPMLK 11 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 QGNFFAS(1)PMLK;QGNFFAS(1)PMLK 69.721 0.001213 9241300.0 6788.1 7425.1 6812.3 7656.200000000001 9914.7 8098.9 8339.7 9304.7 8213.3 8263.1 8622.099999999999 True False 7477.222914864894 8050.839235390721 7274.623643687739 8129.106085508212 9218.325675858152 8032.945243581737 8657.071847158952 9119.110459104055 7868.123563520128 7741.366455810528 7561.636359995129 0.9888366166909552 1.0646953717562673 0.962043570644863 1.0750458893415298 1.2190913761243194 1.0623289538333356 1.1448675174277394 1.2059705102124123 1.0405318622760638 1.0237686774738681 1.0 12.884482756276833 -4.1197278306846705 16.053473255186262 1.0534155312931432 1.0671603247636188 0.0 0.08321764698616806 0.0 0.0 0.01165823789352625 0.0 7.590531192862349e-05 4.1197278306846705 0.013744793470475525 QGNS(ph)QESSNTIK ddPTM_A549_MK2206_60min_R1 1 QGNSQESSNTIK 12 0 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 1 QGNS(1)QESSNTIK 100.11 0.00024666 2341700.0 1491.3 1709.0 1589.3 1431.4 1991.8 1447.5 1686.0 1311.2 2223.1 1753.8 2120.2 True False 1742.9949812155526 1795.9808002708082 1814.6866381249956 1782.0930642579872 1698.8088585215046 1600.6734892272646 1992.3243760625094 1497.06661538159 1719.5713995612107 1357.615361933 1593.695825456837 1.0936810860478465 1.1269282202932205 1.138665615569904 1.11821405050562 1.0659555175998134 1.0043782907998944 1.2501283772211704 0.9393678464034705 1.0789834371739608 0.8518660463604064 1.0 10.638160585897488 -14.999999917487932 0.08237234829326626 0.6792888625329493 1.1872642362189563 0.31620380641618673 0.08502523168308317 159.34718327575078 0.9675918809215793 9.221505790012735 0.8905876752682936 1.0000001899910764e-15 14.999999917487932 0.507975373686007 QGPAGS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 QGPAGSPSR 9 0 Q9Y4R8 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog 1 QGPAGS(0.989)PS(0.011)R;QGPAGS(1)PSR 141.44 3.9451e-05 110723000.0 6164.2 5804.700000000001 6751.2 4536.299999999999 7652.1 6079.7 5817.2 6356.9 8111.400000000001 9148.599999999999 9588.8 True False 7204.566259779328 6100.13443612168 7708.621677033583 5647.693703642247 6526.486226675572 6723.04981862176 6874.109940943551 7258.010042189774 6274.18085124412 7081.924906021355 7207.636322583018 0.9995740541467012 0.846343261938549 1.069507579465528 0.7835708477614016 0.9054960509351364 0.9327676255747049 0.9537259696921083 1.0069889374757885 0.8704907643003312 0.9825585794100372 1.0 12.815310503243813 -7.503987105661507 6.272210025090133 0.9444735970187528 0.9174734836937982 0.03907338155543694 0.07803814647080078 0.67302917706972 102.80701601899676 0.011983471937041112 0.01870336445328901 3.1333787539261014e-08 7.503987105661507 -0.027000113324954556 QGPAGS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 QGPAGSPSR 9 0 Q9Y4R8 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog 1 QGPAGS(0.957)PS(0.043)R;QGPAGS(0.82)PS(0.18)R;QGPAGS(0.565)PS(0.435)R 124.39 8.7943e-05 127836600.0 7560.670000000001 7149.750000000001 7378.75 5680.9400000000005 9003.75 5530.53 6481.07 6569.610000000001 7496.1900000000005 7776.73 7725.39 True False 8328.223652528923 7752.284524549812 7879.516347028299 6031.838761449161 8371.357661251248 5485.491197321374 6727.710665427586 6438.5739747906555 7181.151203002925 7285.705940614956 6775.216005282101 1.229218912878359 1.14421215773873 1.1629911638072148 0.8902799197467082 1.235585353252909 0.8096407838576319 0.9929883652687267 0.9503127235753086 1.059914724106855 1.0753466656907862 1.0 12.726051227406323 -6.124017812239705 8.014149793949851 1.0126192337949036 1.17846525956018 0.3600637040250583 0.10455717623196514 0.22506866368419068 13.661765283243527 0.01302594169580734 0.03467141321007479 7.515920674404642e-07 6.124017812239705 0.1658460257652763 QGPAGSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 QGPAGSPSR 9 0 Q9Y4R8 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog 1 QGPAGS(0.033)PS(0.967)R 56.011 0.016472 2975900.0 636.15 546.9 941.3 813.49 782.34 418.84 794.69 651.29 595.98 756.55 915.45 True False 700.7314796911221 592.989182345717 1005.1822784967286 863.737429730163 727.3911373264814 415.4291059059596 824.9323628210537 638.2995100228791 570.9330331762778 708.7813038863694 802.8554535156801 0.8727990532076974 0.7386001798319175 1.2520090311338927 1.0758318025341704 0.9060051023397266 0.5174394769155617 1.0274979876000088 0.7950366497827032 0.7111280501068767 0.8828255457226294 1.0 9.64899645738346 -6.996088208246905 24.80514475720499 0.8413241332709018 0.986885422997787 0.15378072650289032 0.17540062494763795 186.33519048151294 1181551.3432037556 0.027216481998607916 0.051268734794529876 1.0090479205720689e-07 6.996088208246905 0.1455612897268852 QGPGPGGPK ddPTM_A549_PD325901_60min_R1 1 QGPGPGGPK 9 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 95.531 0.00011221 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QGPPCS(ph)DS(ph)EEEVER ddPTM_A549_PD325901_60min_R1 1 QGPPCSDSEEEVER 14 0 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 2 QGPPCS(1)DS(1)EEEVER 54.09 0.021458 1326000.0 137.82 362.74 416.24 290.04 239.96 318.33 329.15 312.53 343.98 420.22 357.94 True False 151.8113849422784 393.30937283614077 444.4885494544547 307.9551120713674 223.1060374170596 315.73762602197525 341.67598336779116 306.29634397495806 329.52371682267216 393.68723748480625 313.91564916860835 0.4836056607701595 1.2529141948730596 1.415948999776414 0.9810122970516851 0.7107197045064368 1.0058040332114448 1.08843246353823 0.975728176617414 1.0497205784273613 1.254117908831463 1.0 8.294233141011375 -5.246714193911312 24.311942702341792 1.0369421176756668 0.4836050872939248 0.45982060026719807 0.1798738761784897 1231.8958032868688 2033866.447606514 0.023157679908474168 0.6924295784390353 5.666120497018086e-06 5.246714193911312 -0.553337030381742 QGPPCS(ph)DSEEEVER ddPTM_A549_MK2206_60min_R1 2 QGPPCSDSEEEVER 14 0 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QGPPCS(0.971)DS(0.029)EEEVER;QGPPCS(0.993)DS(0.007)EEEVER 73.834 0.00096544 5160500.0 2400.2 2485.8 2427.66 2347.7 2491.8 2580.0 2102.4300000000003 2419.93 3288.4 3209.8 2396.2 True False 2805.2950807440257 2612.316602289743 2771.9386924498385 2922.8866053922566 2125.2595208675 2853.0138875346042 2484.4143167052794 2762.9624882248104 2543.582650495743 2484.703950697084 1801.1574082443503 1.5574957901533117 1.4503544167392106 1.5389763713942926 1.622782435346 1.1799410263309875 1.5839892029845044 1.3793432519187332 1.5339927957312538 1.412193425656817 1.3795040562940082 1.0 10.81470855261928 -10.592085499309375 0.46260211040233945 0.897097601535382 1.4948197105139356 0.18858833072054704 0.16121497026720877 0.6502797659509253 0.19492158815341082 0.17783882300333298 0.029115084140389595 2.558082229126145e-11 10.592085499309375 0.5977221089785536 QGPPCS(ph)DSEEEVER ddPTM_A549_PD325901_60min_R1 2 QGPPCSDSEEEVER 14 0 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QGPPCS(0.889)DS(0.111)EEEVER;QGPPCS(0.845)DS(0.155)EEEVER 80.53399999999999 0.0005088 5552700.0 1667.62 1620.21 1481.1100000000001 1457.0900000000001 1686.33 1463.8000000000002 1805.44 1754.94 1596.63 1521.5900000000001 1741.4499999999998 True False 1836.9155547630417 1756.7507828274904 1581.6270312379575 1547.0911400085122 1567.887998322679 1451.8792981213426 1874.1470071746753 1719.9363449762038 1529.5291935303885 1425.5165477238265 1527.2626899610914 1.2027502320572232 1.1502610483283957 1.035595933583797 1.0129829990464352 1.0266000791014038 0.950641502385114 1.2271281289680567 1.1261561984598871 1.0014840299473007 0.9333800642770518 1.0 10.576732512422119 -5.677439927283435 2.8840289264971624 1.024512684555767 1.196290096048434 0.33295643923089235 0.07778090118785345 0.21121513898657315 3.358102435776439 0.010680861845680678 0.054987151886018736 2.1016484542979952e-06 5.677439927283435 0.1717774114926669 QGPQS(ph)PER ddPTM_A549_MK2206_60min_R1 1 QGPQSPER 8 0 K7EN89 K7EN89 MIDN 1 QGPQS(1)PER 55.083999999999996 0.021605000000000003 2980700.0 744.34 898.59 561.03 741.53 1136.4 919.62 783.05 687.38 1165.1 1379.4 1278.1 True False 869.9663946342013 944.3243928117878 640.5924901448851 923.204883288547 969.2370653799774 1016.9335780056484 925.3200490366232 784.8182200129633 901.2067102823835 1067.7925819650939 960.7124962344981 0.9055429153300544 0.9829417193104667 0.6667889640820539 0.9609585457741397 1.008873174002515 1.0585201941179159 0.9631602093898068 0.8169126800047356 0.9380607765743166 1.1114590329055727 1.0 9.90796094302733 -5.856157608095572 0.013384748063596574 1.8118603464661012 2.904904128961841e-07 0.15490230605237176 0.10558472093279127 4330.271003571449 10.265612810355828 637.5470071335975 755.5654783735722 1.3926513096398048e-06 5.856157608095572 -1.8118600559756883 QGPSPVS(ph)PNALDR ddPTM_A549_MK2206_60min_R1 2 QGPSPVSPNALDR 13 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 QGPS(0.011)PVS(0.989)PNALDR;QGPS(0.024)PVS(0.976)PNALDR 110.44 5.3327e-05 19652700.0 3455.1 3409.4 2809.9 2454.2 4068.7 2884.0 2871.3999999999996 2917.5 4190.700000000001 3717.8 4099.1 True False 4038.2364109152113 3582.9238972751828 3208.386072149643 3055.479110173226 3470.199619774297 3189.182965755737 3393.0962119963756 3331.0645594690272 3241.513141172763 2877.9463978757612 3081.1803405952837 1.3106134547564408 1.1628413468920686 1.041284740746393 0.9916586413059185 1.1262565757848029 1.035052354364817 1.101232591708939 1.0811001600852308 1.0520361623969414 0.9340402312575259 1.0 11.589267410034584 -5.441444810877765 2.189520353701534 1.0397124747629398 1.3332479201854246 0.7202146038345574 0.05100273180691796 0.15001306734755168 1.057238032609392 0.0061342004172697 0.07323947638295804 3.618721736761528e-06 5.441444810877765 0.2935354454224848 QGPVS(ph)PGPAPPPSFIMSYK ddPTM_A549_MK2206_60min_R1 1 QGPVSPGPAPPPSFIMSYK 19 0 P29375 P29375 KDM5A Lysine-specific demethylase 5A 1 QGPVS(0.999)PGPAPPPS(0.001)FIMSYK 97.28399999999999 1.7717e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QGPVS(ph)PGPAPPPSFIMSYK ddPTM_A549_PD325901_60min_R1 1 QGPVSPGPAPPPSFIMSYK 19 0 P29375 P29375 KDM5A Lysine-specific demethylase 5A 1 QGPVS(1)PGPAPPPSFIMSYK 48.31399999999999 0.0081831 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QGPVSQSATQQPVTADKQQGHEPVS(ph)PR ddPTM_A549_MK2206_60min_R1 4 QGPVSQSATQQPVTADKQQGHEPVSPR 27 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR 291.68 7.528899999999998e-171 279298000.0 10893.2 12664.4 13321.4 12608.399999999998 16447.8 12349.899999999998 9923.099999999999 11042.7 19717.399999999998 21483.199999999997 21066.0 True False 12731.705846829782 13308.963865974021 15210.57483239055 15697.458566012574 14028.350408268905 13656.75822079985 11725.9988233131 12608.036541850428 15251.440382217721 16630.130199269617 15834.730807977417 0.804036772157544 0.8404919557754065 0.9605831015913183 0.9913309393364814 0.8859228854841996 0.862455976448913 0.7405240395628091 0.7962267685345553 0.9631638559042734 1.050231317534712 1.0 13.950804721162656 -8.902117975050341 6.600041929497313 0.9839239904102146 0.864353282292956 0.4477573199422369 0.07054502397329099 0.17880466655133767 10.31239462039799 0.013130114531951153 0.013912240041052864 1.2528008083904496e-09 8.902117975050341 -0.11957070811725856 QGPVSQSATQQPVTADKQQGHEPVS(ph)PR ddPTM_A549_PD325901_60min_R1 4 QGPVSQSATQQPVTADKQQGHEPVSPR 27 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVT(0.007)ADKQQGHEPVS(0.993)PR;QGPVSQSATQQPVT(0.093)ADKQQGHEPVS(0.907)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR 309.97 5.936299999999998e-190 360457000.0 16201.0 16664.01 16411.899999999998 16785.2 19181.8 18983.000000000004 20101.699999999997 20453.300000000003 20226.6 20276.999999999996 21923.2 True False 17845.71359345417 18068.344605048183 17525.710226771982 17821.983682044938 17834.53654161757 18828.408741793584 20866.681193572298 20045.342886196555 19376.5463418962 18996.70675950553 19226.785382615064 0.9281693865262747 0.9397485978797918 0.9115257635641368 0.9269351754537005 0.9275880594029842 0.9792801223452728 1.0852922513214318 1.0425738097811001 1.0077891834906811 0.9880334326029576 1.0 14.23082995136722 -7.4023406660679 3.9941485061987025 1.0134767528892312 0.9268789333125383 0.7556890812274648 0.026081966732170087 0.10299577802845805 2.845091858385533 0.004195069884091124 0.0068062410302426 3.959673106521366e-08 7.4023406660679 -0.08659781957669288 QGQDVAPPPNPVPQRT(ph)SPTGPK ddPTM_A549_MK2206_60min_R1 2 QGQDVAPPPNPVPQRTSPTGPK 22 1 Q9UPY8-2 Q9UPY8-2 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 QGQDVAPPPNPVPQRT(0.654)S(0.344)PT(0.002)GPK;QGQDVAPPPNPVPQRT(0.421)S(0.289)PT(0.289)GPK 119.14 1.7734000000000002e-15 36294000.0 4811.2 5748.2 5997.1 5185.200000000001 7054.0 5095.2 5090.799999999999 4747.5 8649.9 8395.9 8447.5 True False 5623.212937453404 6040.758827452691 6847.578957716862 6455.574232772473 6016.365944377298 5634.3706820799725 6015.732463617446 5420.472663608981 6690.711461051915 6499.260358794207 6349.752610860591 0.8855798457148526 0.9513376658360834 1.0784009043131524 1.0166654716170966 0.9474961172639907 0.8873370393112588 0.9473963526276854 0.8536509996212808 1.0536963990704378 1.0235454445387209 1.0 12.632484669611909 -8.818881322872976 24.999999010355545 1.0253566601647457 0.951072702484745 0.2555487931935946 0.0601764860686203 90.18231926862104 39248.808278511715 0.011192068202118943 0.011914867507426031 1.5174649796361773e-09 8.818881322872976 -0.07428395768000073 QGQDVAPPPNPVPQRT(ph)SPTGPK ddPTM_A549_PD325901_60min_R1 2 QGQDVAPPPNPVPQRTSPTGPK 22 1 Q9UPY8-2 Q9UPY8-2 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 QGQDVAPPPNPVPQRT(0.667)S(0.331)PT(0.002)GPK;QGQDVAPPPNPVPQRT(0.499)S(0.499)PT(0.001)GPK 138.02 9.730500000000002e-23 27609000.0 7076.4 7146.0 7575.799999999999 7530.8 7900.3 8591.6 7642.0 9851.0 8000.099999999999 8842.5 10072.3 True False 7794.790918629655 7748.218498889177 8089.939344986209 7995.960412312282 7345.4101825554135 8521.6328581359 7932.8204918628535 9654.51407704 7663.883618097152 8284.183040929513 8833.470953570362 0.8824154128767596 0.8771431456122532 0.9158279217204389 0.9051889630180342 0.8315429145761218 0.9646981240926114 0.8980411588557408 1.0929468300496061 0.8675959493589007 0.9378174315025245 1.0 13.108764715012079 -7.285105673825782 24.633201286044415 0.9473911139094554 0.885250830638405 0.2923735910976788 0.05833978946602795 890.4319933074498 926809.1256717585 0.009837762078054757 0.01573261096227783 5.186738183163688e-08 7.285105673825782 -0.06214028327105037 QGQDVAPPPNPVPQRTS(ph)PTGPK ddPTM_A549_PD325901_60min_R1 2 QGQDVAPPPNPVPQRTSPTGPK 22 1 Q9UPY8-2 Q9UPY8-2 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 QGQDVAPPPNPVPQRT(0.192)S(0.8)PT(0.008)GPK;QGQDVAPPPNPVPQRT(0.163)S(0.824)PT(0.013)GPK 115.45 1.8257e-15 26018000.0 7192.3 7725.5 7284.5 7700.0 8105.7 7707.5 8485.9 8562.0 8446.7 9172.0 9831.3 True False 7922.457001308588 8376.554997644604 7778.8699752570055 8175.611512031193 7536.383595146942 7644.732675413483 8808.83556816266 8391.224193240934 8091.71457319049 8592.878354696686 8622.112425745481 0.9188533633187461 0.9715200387125958 0.9022000167881634 0.9482144407696375 0.8740762382827935 0.8866426576144427 1.0216563103329095 0.9732213846092845 0.9384840017892562 0.9966094073464523 1.0 13.073825658940034 -7.751017212793878 24.99999279133511 0.9738765131371083 0.9182059576624444 0.5123349303831004 0.03258329586359128 177.4329334256063 425612.98751379526 0.005487579515204806 0.008090093303475638 1.77411916419509e-08 7.751017212793878 -0.05567055547466393 QGQETAVAPS(ph)LVAPALNKPK ddPTM_A549_MK2206_60min_R1 1 QGQETAVAPSLVAPALNKPK 20 1 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 QGQETAVAPS(1)LVAPALNKPK 103.67 4.0726e-10 2640500.0 1436.0 1587.6 2419.0 1693.4 2475.4 2334.6 1360.5 1641.6 2469.3 2486.0 2418.2 True False 1678.3616931707454 1668.4020588121314 2762.0505742303926 2108.2830760196152 2111.271939142551 2581.645822417943 1607.6852394027542 1874.3018271891533 1910.0074926618222 1924.4108733980147 1817.6942010752396 0.923346563012594 0.91786729463361 1.5195353391106865 1.1598667557900997 1.1615110714957713 1.4202861080212474 0.8844640855715683 1.0311425464637716 1.0507859306213199 1.0587099151549517 1.0 10.827893793489718 -7.786415813857045 24.999525958120802 1.015729780322634 1.1848192862323634 0.20819761921740654 0.17296053779902473 291.9004762628413 292169.1995520069 0.02649947431064286 0.03662257626019552 1.635250106704725e-08 7.786415813857045 0.1690895059097295 QGQETAVAPS(ph)LVAPALNKPK ddPTM_A549_PD325901_60min_R1 2 QGQETAVAPSLVAPALNKPK 20 1 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 QGQET(0.004)AVAPS(0.996)LVAPALNKPK;QGQETAVAPS(1)LVAPALNKPK 109.39 1.7458e-10 6597600.0 4597.0 5156.6 4363.5 5123.5 6407.8 5346.1 5430.200000000001 5884.0 5553.0 5417.4 5978.4 True False 5063.684055867465 5591.164779089277 4659.633349857088 5439.9669586872515 5957.73823370993 5302.563134093807 5636.8492325194575 5766.639004091293 5319.6267210776705 5075.344439460731 5243.094700200058 0.96578153655593 1.066386380332962 0.8887181361952691 1.0375488656498388 1.1363018549870183 1.0113422391343572 1.0750996414969152 1.0998540621193165 1.0145967267908955 0.9680054871538128 1.0 12.356202888550905 -5.220684617542722 21.501844593025766 1.0227712368456716 0.9657805152432938 0.06649389853694554 0.06422643235244978 8309.095017351157 4383244.926559399 0.008349506240236178 2.704858937166116 6.01610465367935e-06 5.220684617542722 -0.056990721602377836 QGQSQAASSSSVT(ph)SPIK ddPTM_A549_MK2206_60min_R1 1 QGQSQAASSSSVTSPIK 17 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAASSSSVT(0.5)S(0.5)PIK 236.27 8.155299999999998e-74 21601000.0 4626.4 5517.0 4846.8 6234.2 6213.0 4833.0 4236.9 4924.2 8984.2 7734.8 7163.7 True False 5407.223215379619 5797.791734987736 5534.149120785394 7761.579279863869 5299.075930311333 5344.424852114243 5006.689886678083 5622.220429730034 6949.293044819318 5987.503307948095 5384.755581938092 1.004172451859633 1.076704717004255 1.0277437920020749 1.4413986227895426 0.984088478980522 0.9925102023276359 0.9297896274943022 1.0440994663877525 1.2905493924606537 1.1119359489652194 1.0 12.394665145916518 QGQSQAASSSSVT(ph)SPIK ddPTM_A549_PD325901_60min_R1 1 QGQSQAASSSSVTSPIK 17 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAASSSSVT(0.5)S(0.5)PIK 264.84 8.806399999999998e-100 38621000.0 8219.7 8047.6 8281.7 6342.5 10447.0 6666.2 7992.1 8395.7 8272.9 8282.8 7851.7 True False 9054.157892976675 8725.79949505466 8843.74596390774 6734.261820137388 9713.238760193455 6611.912677371565 8296.243738944924 8228.241177200764 7925.21878278471 7759.822594448507 6885.990676027163 1.3148664177687246 1.2671814275660571 1.284309895262608 0.9779655734333184 1.4105797142608765 0.9601977389237875 1.2048003154909004 1.1949248211802699 1.150919185873357 1.1268999566705042 1.0 12.749448512090613 -12.804424611624487 0.03267468577684241 1.4988829030747525e-11 1.9709758677841092 0.19944471161620259 0.12514044718668052 461.5337621230947 1.783534134117105 73.10035994925133 39.071337572153055 1.568828204030073e-13 12.804424611624487 1.9709758677691203 QGQSQAASSSSVT(ph)SPIKMK ddPTM_A549_MK2206_60min_R1 1 QGQSQAASSSSVTSPIKMK 19 1 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAAS(0.002)S(0.009)S(0.007)S(0.007)VT(0.488)S(0.488)PIKMK 69.133 0.00037099 3757300.0 1107.8 1248.9 1367.9 1440.8 1859.5 957.99 1437.7 1015.7 2042.6 2058.5 1986.2 True False 1294.7695568903566 1312.4636755168 1561.8887889581458 1793.7960646799693 1585.9700132647556 1059.3638659377038 1698.9114801097674 1159.678585450794 1579.9543613619408 1593.4834203096593 1492.971723668696 0.8672431877736472 0.8790947977846951 1.0461609983611069 1.2014936627681427 1.0622907240115262 0.7095672671780529 1.137939488857172 0.7767585728958769 1.0582614099880614 1.0673232419928054 1.0 10.543971126283733 -5.750219292161199 22.74981124267334 1.0123231161899653 0.8731686302231846 0.12199950878205335 0.1374163976278875 105.43562230701917 213766.15845066748 0.01752802621361761 0.06635776860856432 1.7773817143181912e-06 5.750219292161199 -0.1391544859667807 QGQSQAASSSSVT(ph)SPIKMK ddPTM_A549_PD325901_60min_R1 2 QGQSQAASSSSVTSPIKMK 19 1 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAAS(0.003)S(0.014)S(0.012)S(0.012)VT(0.479)S(0.479)PIKMK;QGQSQAAS(0.001)S(0.003)S(0.002)S(0.005)VT(0.495)S(0.495)PIKMK 68.55199999999999 0.00040119999999999994 14519800.0 2256.7 2373.2 2357.4 2248.48 2393.3 3618.6 3819.0 3062.6 3160.5 3593.2 2945.5 True False 2485.7985227052654 2573.1978927461228 2517.3873401977994 2387.3635029314155 2225.2028644367765 3589.1313213430053 3964.3341348369845 3001.5140404367767 3027.6751759348053 3366.3247387806505 2583.222173062905 0.9622859963910402 0.9961194664472486 0.9745144519307661 0.9241804780967556 0.8614059168586232 1.3894009422687026 1.5346469909463911 1.161926400189538 1.1720537271267366 1.3031495215098852 1.0 11.3349560141389 -7.224587473133212 24.918190583836115 1.1469055624130216 0.9472407367758581 0.4232362751491555 0.15587224584344786 663.6173567158032 448719.13211769424 0.026302192353486645 0.04555602442884915 5.962282188307441e-08 7.224587473133212 -0.19966482563716348 QGQSQAASSSSVTS(ph)PIK ddPTM_A549_MK2206_60min_R1 1 QGQSQAASSSSVTSPIK 17 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAASSSSVT(0.104)S(0.896)PIK 216.26 2.8241000000000002e-55 32768000.0 4650.7 5830.7 5042.6 6807.6 5822.9 5008.9 4799.7 5484.0 10821.0 7974.7 7316.4 True False 5435.62446130166 6127.4577250667035 5757.716505007929 8475.46230560478 4966.359123548987 5538.938473361273 5671.74336167688 6261.373794045638 8370.060777586192 6173.209731330313 5499.535957632488 0.9883787474392036 1.114177227364567 1.0469458785912886 1.5411231731001187 0.9030505776867345 1.00716469826406 1.031313079025403 1.138527658021008 1.5219576418933798 1.1224964758640903 1.0 12.425094176051008 -8.539662952073314 24.938363355381533 1.2508885525932507 1.0956700418181948 0.06443761951336979 0.19415125051503657 462.787034620808 687616.815826368 0.039676295919039546 0.04499382554646374 2.8862706154672493e-09 8.539662952073314 -0.15521851077505588 QGQSQAASSSSVTS(ph)PIK ddPTM_A549_PD325901_60min_R1 1 QGQSQAASSSSVTSPIK 17 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAASSS(0.002)S(0.038)VT(0.099)S(0.861)PIK 268.07 5.665199999999999e-100 44859000.0 8396.5 8311.9 8556.8 6568.1 11098.0 7371.4 8838.5 9852.5 8392.2 8418.4 8654.2 True False 9248.906498823395 9012.372983615587 9137.515904218426 6973.796619762611 10318.514766021532 7311.369762379879 9174.853954112778 9655.984158363279 8039.505018661637 7886.860787306865 7589.788263493797 1.2185987510758118 1.1874340456853447 1.2039223739836145 0.9188394165494641 1.3595260378543979 0.9633166971925836 1.2088418853847354 1.272233667546129 1.0592528723536252 1.0391410818720674 1.0 12.889843923205545 -8.94914179314669 8.98943464501185 1.0259979829591483 1.161754960510852 0.20086841930435984 0.12001783461601573 0.32724925187607984 53.679656319168416 0.019320983823658117 0.020434643882002078 1.124237860738e-09 8.94914179314669 0.13575697755170357 QGQSQAASSSSVTS(ph)PIKMK ddPTM_A549_MK2206_60min_R1 1 QGQSQAASSSSVTSPIKMK 19 1 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAAS(0.003)S(0.01)S(0.01)S(0.01)VT(0.188)S(0.777)PIKMK 55.733999999999995 0.0019749000000000004 3460600.0 1274.7 1328.7 1461.3 1184.5 1760.8 1676.4 1869.0 717.11 2404.1 1994.8 2378.2 True False 1489.838196577123 1396.3251546634422 1668.5343134034197 1474.702553174225 1501.7886525176552 1853.7955352957406 2208.573107272141 818.7625385572696 1859.5751885588165 1544.1732945512313 1787.627305019077 0.8334165585825082 0.7811052956860831 0.9333792948444662 0.8249496687781278 0.8401016522298134 1.037014555601654 1.2354773845035734 0.4580163528820858 1.0402476977934567 0.8638116514643147 1.0 10.80383027104533 -4.4483198288445704 0.18036610164629843 1.040655695304011 0.5159417103006522 0.0 0.1894597667588136 36.04393062699251 0.8276885676330252 0.23067850568440318 4.472324962666869 3.56188727636446e-05 4.4483198288445704 -0.5247139850033588 QGQT(ph)SPIKPK ddPTM_A549_PD325901_60min_R1 1 QGQTSPIKPK 10 1 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 QGQT(0.6)S(0.4)PIKPK 60.434 0.030784 2868800.0 1016.2 1164.1 939.71 761.45 1269.3 693.4 1057.1 1045.7 1309.0 1051.4 1023.1 True False 1119.3638759130986 1262.2027924093054 1003.4843715352814 808.4830371215791 1180.1487468472822 687.7531802960375 1097.3285189673152 1024.842693164219 1253.9872821701197 985.0144245669538 897.2651859652543 1.2475284825733168 1.4067221286998457 1.1183810396652794 0.9010524979321852 1.3152730823694103 0.7664993483015511 1.2229701275959326 1.1421848403286932 1.397565961306203 1.0977963259627657 1.0 9.80939062523749 -11.25725421640823 1.7684182386281255 0.9997603741682426 1.199586673089123 0.028916137645851103 0.18898688151495932 0.6443413637566823 3.6369610168050963 0.14572387682890103 0.029544444915018602 5.530262977928097e-12 11.25725421640823 0.19982629892088033 QGQTS(ph)PIKPK ddPTM_A549_MK2206_60min_R1 3 QGQTSPIKPK 10 1 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 QGQT(0.127)S(0.873)PIKPK;QGQT(0.128)S(0.872)PIKPK;QGQT(0.007)S(0.993)PIKPK 107.37 7.4749e-05 158953200.0 13993.34 15935.7 16335.54 14345.01 22437.79 16875.76 16595.51 17226.91 23665.100000000002 22166.600000000002 24031.16 True False 16355.073687683791 16746.75906312201 18652.165207674065 17859.538093971976 19137.22081416068 18661.541721977126 19610.699351239098 19668.87724769926 18304.99263539922 17159.14966462771 18063.559745724597 0.9054180857986653 0.9271018170759915 1.0325852417925976 0.9887053463091122 1.059437955948312 1.033104326316083 1.0856497626875947 1.0888704953271804 1.0133657425819276 0.9499317911957553 1.0 14.140794609103386 -5.709927912493796 5.017336943453218 1.0227466514147698 0.9118192009590498 0.5425012003469886 0.039415129291879916 0.10684555719733817 5.64045428842697 0.005145126664884556 0.020611768884439184 1.9501682766794624e-06 5.709927912493796 -0.11092745045572006 QGQTS(ph)PIKPK ddPTM_A549_PD325901_60min_R1 3 QGQTSPIKPK 10 1 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 QGQT(0.101)S(0.899)PIKPK;QGQT(0.061)S(0.939)PIKPK;QGQT(0.261)S(0.739)PIKPK 90.926 0.00018172 223208500.0 14544.98 15357.900000000001 16855.7 13301.95 17544.9 13696.900000000001 16600.68 15767.900000000001 15923.099999999999 15897.0 15482.6 True False 16021.57566215164 16652.164131554735 17999.62916355817 14123.581240579662 16312.606750619141 13585.356987592719 17232.42796164066 15453.396864821743 15253.907481071828 14893.26070700101 13578.338352287807 1.1799363991730383 1.2263771677739215 1.3256135394891984 1.0401553470053269 1.2013698824842318 1.0005168994263374 1.2691116920604042 1.138091897836528 1.1234001602634762 1.096839710471028 1.0 13.729019320281596 -14.999999999105716 0.09382957601676152 0.42640310338332016 1.3032846319275377 0.22058575586471096 0.09017752426094003 86.192784079999 0.5869981090961547 9.744735534662789 0.6962939590914893 1.0000000020591645e-15 14.999999999105716 0.8768815285442175 QGRGS(ph)AGEEEESLAILR ddPTM_A549_MK2206_60min_R1 1 QGRGSAGEEEESLAILR 17 1 H7BYP9;O15068-5;O15068-4;O15068-3;O15068-2;O15068-6;O15068-8;O15068-10;O15068-9;O15068 H7BYP9 MCF2L Guanine nucleotide exchange factor DBS 1 QGRGS(1)AGEEEESLAILR 54.271 0.0036123000000000006 1425200.0 519.92 569.2 346.1 358.01 673.99 643.86 357.46 429.14 759.01 503.95 796.61 True False 607.6697851764164 598.1698487502305 395.1821842666968 445.72246607167955 574.8469638291541 711.9928378403224 422.40585496281415 489.97190918613103 587.0954468899083 390.10734499152437 598.789751682469 1.0148299690650957 0.9989647402439725 0.6599681827491549 0.7443722355289086 0.9600147000077391 1.189053145682232 0.7054326727802964 0.8182703658661766 0.980470098628605 0.6514930222092271 1.0 9.225905719582205 -8.873647374015082 7.761093020181276 0.9913758384341702 0.884468640575058 0.0 0.17854667119062775 0.4314297697076528 28.015914011808615 0.02604768824360417 0.027669694991718674 1.3376812077667324e-09 8.873647374015082 -0.10690719785911218 QGRPSIS(ph)FR ddPTM_A549_PD325901_60min_R1 1 QGRPSISFR 9 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 QGRPS(0.295)IS(0.705)FR 41.218 0.025287999999999998 1626500.0 332.51 332.77 295.68 294.67 402.35 214.1 459.7 352.9 521.33 432.77 420.4 True False 366.2661704190755 360.8136957564165 315.7466228682808 312.87109665587434 374.0903240321468 212.35644058462876 477.19413505749196 345.8611326553056 499.42031307391017 405.44482834300965 368.69346513517047 0.9934164965055589 0.9786278572204553 0.8563933259639459 0.8485940930392392 1.0146377937428257 0.5759701775749527 1.2942842230266896 0.9380723157881464 1.3545678464651187 1.099679996211393 1.0 8.52627803555109 -7.7879704109601935 24.99995424596549 1.1594855211695123 0.8864166778786341 0.4013622208187916 0.1564857961238713 178.63713261602223 168327.54443054507 0.026958791351887647 0.03725466238224177 1.6294070424487196e-08 7.7879704109601935 -0.2730688432908782 QGRPTLQEGPGLQQKPRPEAEPPS(ph)PPSGDLR ddPTM_A549_MK2206_60min_R1 3 QGRPTLQEGPGLQQKPRPEAEPPSPPSGDLR 31 3 F8WDP1;B0QYI1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-2;Q8WUA7-4;Q8WUA7 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 QGRPTLQEGPGLQQKPRPEAEPPS(1)PPSGDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.999)PPS(0.001)GDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.995)PPS(0.005)GDLR 85.001 4.2917e-07 86845800.0 6956.6 6671.0 7372.94 6501.37 9144.9 7097.51 6729.1 6394.83 9769.300000000001 9594.1 10844.4 True False 8130.704007459339 7010.525405855214 8418.533758067899 8094.205941857586 7799.69732417578 7848.5637972541645 7951.690367118765 7301.316735845524 7556.569148366399 7426.786146608162 8151.436189785927 0.9974566221407012 0.8600356112263603 1.0327669335885443 0.9929791209063192 0.9568494609513241 0.9628442908120567 0.9754956282529142 0.8957092426233261 0.9270230389382278 0.9111015499224812 1.0 12.992838552759334 QGRPTLQEGPGLQQKPRPEAEPPS(ph)PPSGDLR ddPTM_A549_PD325901_60min_R1 4 QGRPTLQEGPGLQQKPRPEAEPPSPPSGDLR 31 3 F8WDP1;B0QYI1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-2;Q8WUA7-4;Q8WUA7 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 QGRPTLQEGPGLQQKPRPEAEPPS(0.988)PPS(0.012)GDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.981)PPS(0.019)GDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.734)PPS(0.266)GDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.791)PPS(0.208)GDLR 110.32 1.8234999999999998e-15 204140000.0 10390.0 11216.4 11874.399999999998 10505.2 15084.8 12168.599999999999 12094.5 13536.8 13783.300000000001 14178.8 15532.7 True False 11444.785151286256 12161.645391959226 12680.268190567882 11154.082344959752 14025.295687734866 12069.50295608647 12554.762815864346 13266.79790458583 13204.035833716885 13283.548148230853 13622.276369897863 0.8401521772511261 0.8927762924288998 0.9308479615483646 0.8188119255609687 1.029585313562393 0.8860121927020457 0.9216347161776515 0.9739046209561891 0.9692973094346262 0.9751342424372241 1.0 13.73368018665493 -2.0000000000313425 0.1351288880644628 1.023999671749887 0.4429957510801499 0.4200702666623566 0.04824375439736404 42.1887183078272 0.3668472979937507 0.10708612061240312 4.738215459431062 0.009999999999278312 2.0000000000313425 -0.581003920669737 QGS(ph)DEWGGPAELGPGEAGPGWQDKPPR ddPTM_A549_PD325901_60min_R1 1 QGSDEWGGPAELGPGEAGPGWQDKPPR 27 1 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3;M0QY61 M0QZ22 SAMD4B Protein Smaug homolog 2 1 QGS(1)DEWGGPAELGPGEAGPGWQDKPPR 58.16 0.00063932 4013800.0 1792.9 1661.9 1670.4 1543.3 1988.2 2257.2 1765.7 2032.5 2072.0 1713.5 2565.0 True False 1974.9138881367792 1801.9541454385567 1783.763388931196 1638.626135911395 1848.5556909176432 2238.8181115722737 1832.8946797281142 1991.960193034596 1984.921045574094 1605.3093175722604 2249.5212608746738 0.8779263048035741 0.8010389484996061 0.7929524472409838 0.7284332735198304 0.8217551543384283 0.9952420323877097 0.8147932236103588 0.8855040526534382 0.8823748768670467 0.713622647401907 1.0 11.135402286970692 -10.62023810503319 0.19263479616271867 1.1151279554481233 0.7801211887341093 0.0 0.10459313711470958 4.793805124072516 0.28156618742652845 0.4190828656662404 0.09750386065183794 2.397518102301684e-11 10.62023810503319 -0.33500676671401397 QGS(ph)FRGFPALSQK ddPTM_A549_MK2206_60min_R1 1 QGSFRGFPALSQK 13 1 Q9Y6R0;A0A0C4DGH3;P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9 Q9Y6R0;P49757-4 NUMBL;NUMB Numb-like protein;Protein numb homolog 1 QGS(1)FRGFPALSQK 49.559 0.008398000000000001 3725400.0 1073.8 1416.3 1821.4 1612.5 2244.0 1176.0 1110.7 929.69 1627.5 2084.6 2488.0 True False 1255.0311881105476 1488.38362049359 2079.7019081865405 2007.5625723878763 1913.9105726088258 1300.4435394343775 1312.4998128663271 1061.4764045562165 1258.8738485834517 1613.6874121824237 1870.1609346932419 0.6710819185817329 0.7958585771324145 1.1120443538340026 1.0734704886332 1.0233935150200109 0.6953645086419722 0.7018111588784809 0.5675855937662007 0.6731366403982456 0.8628601861192834 1.0 10.868946709691349 -7.255677987708002 24.428622835623912 0.797502918178595 0.9449399952331415 0.2203871780940141 0.15983434658880277 618.7964815969823 2623727.512565864 0.029073663433861002 0.049455834832407265 5.5503709862342275e-08 7.255677987708002 0.14743707705454656 QGS(ph)FRGFPALSQK ddPTM_A549_PD325901_60min_R1 2 QGSFRGFPALSQK 13 1 Q9Y6R0;A0A0C4DGH3;P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9 Q9Y6R0;P49757-4 NUMBL;NUMB Numb-like protein;Protein numb homolog 1 QGS(1)FRGFPALSQK;QGS(1)FRGFPALSQK 72.184 0.00051565 19379800.0 3350.0 3923.0 4805.2 5252.4 4727.5 7199.0 6345.5 6365.1 5493.9 4901.2 5843.1 True False 3690.0895338603445 4253.6049777697 5131.309768014957 5576.828818934114 4395.456708989618 7140.373730820838 6586.981474890836 6238.143087175645 5263.010488551886 4591.737395555975 5124.435742462691 0.7200967519766319 0.8300630921221213 1.0013414209676403 1.0882815395113163 0.8577445264007268 1.3933970664620592 1.2854062000054034 1.2173326783053249 1.0270419521394172 0.8960474140611014 1.0 12.323177441208504 -5.633866096152294 1.555853520130735 1.068841694833003 0.6866094157648178 0.39253843895574614 0.15249940243432913 0.4959603519240553 1.7831112780716023 0.02247212013136216 0.23258671510702825 2.3234530646042863e-06 5.633866096152294 -0.38223227906818524 QGS(ph)FSEDVISHK ddPTM_A549_MK2206_60min_R1 2 QGSFSEDVISHK 12 0 H3BPE1;H3BQK9;E9PNZ4;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 QGS(0.965)FS(0.033)EDVIS(0.002)HK;QGS(0.802)FS(0.197)EDVIS(0.001)HK 134.81 4.1214e-08 16581600.0 7773.4 8491.0 7350.0 7667.4 9874.5 9002.5 7661.7 9227.0 11162.900000000001 12084.5 11933.5 True False 9085.359878616622 8923.155632006688 8392.340521121698 9545.91334420266 8421.974130671051 9955.138574624145 9053.731715348826 10534.955506502383 8634.520973488303 9354.603056950247 8970.082602155055 1.0128513060107018 0.9947685018934952 0.9355923343565916 1.0641945863362798 0.9388959393359074 1.1098157080774742 1.0093253448049269 1.1744546816069865 0.9625910213372915 1.0428669915149735 1.0 13.130905555109942 -4.892238826353572 15.036244712162514 1.003752664829347 1.3924387046421212 0.0 0.07150592024493788 32597993.247790564 46972528.47155673 0.009323043351025032 423984099.4182577 1.2816255998438175e-05 4.892238826353572 0.38868603981277405 QGS(ph)FSEDVISHK ddPTM_A549_PD325901_60min_R1 2 QGSFSEDVISHK 12 0 H3BPE1;H3BQK9;E9PNZ4;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 QGS(0.997)FS(0.003)EDVISHK;QGS(0.968)FS(0.032)EDVISHK 151.38 2.3988e-12 24696000.0 11491.5 11001.8 11400.5 11094.7 15681.9 11642.9 13523.1 13507.0 11892.5 12560.2 13316.599999999999 True False 12658.108620404817 11928.960296820464 12174.206486775682 11779.994421108117 14580.45744361804 11548.084082591187 14037.72897062426 13237.592288963488 11392.69958228277 11767.146828462859 11678.742620882524 1.0838588563268026 1.0214250526842275 1.0424244186191096 1.0086697518313783 1.2484612356767772 0.9888122769263098 1.2019897540616813 1.1334775256793155 0.9755073771307978 1.0075696682810924 1.0 13.511597335936408 -8.772240247608616 24.99405465931363 0.9884340307924192 1.0899713040806454 0.24079436385369113 0.07631679435047885 197.025018478395 455929.59319026873 0.012638012146449827 0.013518528921638006 1.689506054280384e-09 8.772240247608616 0.10153727328822615 QGS(ph)FSEDVISHKGDLR ddPTM_A549_MK2206_60min_R1 2 QGSFSEDVISHKGDLR 16 1 H3BPE1;H3BQK9;E9PNZ4;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 QGS(0.985)FS(0.015)EDVISHKGDLR;QGS(0.98)FS(0.02)EDVISHKGDLR 79.467 0.00013887 9534900.0 1109.81 1216.9 1228.24 1132.19 1835.3600000000001 1176.18 1095.52 871.1500000000001 2457.6 1963.73 2289.1 True False 1297.1187957505738 1278.8350121998515 1402.4229009064645 1409.5766008259411 1565.3809752866912 1300.6425869149036 1294.5618033594296 994.6381802849845 1900.9575239807625 1520.1220291302839 1720.6532940539782 0.7538525048788138 0.7432264341800245 0.8150525766886245 0.819210125419794 0.9097596713388699 0.7559004428198894 0.752366445833694 0.5780584524041726 1.1047882397632676 0.8834563211446108 1.0 10.748740713046015 -8.780655565053133 24.99999512071079 1.0494833637815149 0.7725931688288912 0.527322795895206 0.09322898644835248 94.91128943216248 123477.77838044334 0.0146265350647207 0.015582668631097847 1.6570836602232209e-09 8.780655565053133 -0.2768901949526237 QGS(ph)FSEDVISHKGDLR ddPTM_A549_PD325901_60min_R1 1 QGSFSEDVISHKGDLR 16 1 H3BPE1;H3BQK9;E9PNZ4;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 QGS(0.989)FS(0.011)EDVISHKGDLR 102.07 4.919399999999999e-07 7696700.0 650.85 690.36 1065.4 780.38 641.19 821.78 1047.9 1095.1 989.07 1053.9 946.05 True False 716.923812869554 748.5390600186312 1137.7044507706523 828.582300228429 596.1550263854162 815.0876961402907 1087.7784079328824 1073.2573714106697 947.5028274835751 987.3565741403003 829.6918475050617 0.8640844369212394 0.9021892432347476 1.3712373505799833 0.9986626995552997 0.7185258336309968 0.982398101887241 1.3110631509805768 1.2935614284243309 1.1419936574437592 1.1900280533180443 1.0 9.69643180018121 -7.576976915880376 24.99810385120998 1.1077561896270804 0.9768534353262815 0.2178932901358166 0.17488921766605778 169.09550800580956 78136.22863650868 0.02867505366426146 0.042531982619189224 2.6486409184725436e-08 7.576976915880376 -0.1309027543007989 QGS(ph)FTIEKPSPNIPIELIPHINK ddPTM_A549_MK2206_60min_R1 1 QGSFTIEKPSPNIPIELIPHINK 23 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 QGS(0.829)FT(0.162)IEKPS(0.009)PNIPIELIPHINK 226.07 5.528899999999999e-88 217450000.0 17038.0 21494.0 22017.0 18519.0 29063.0 22521.0 20180.0 21141.0 34102.0 31084.0 28183.0 True False 19913.59786089357 22587.95279170318 25139.34166714782 23056.15583134951 24787.871199523295 24904.157271770087 23846.44478584901 24137.801491597154 26377.951449703764 24062.102811224428 21184.38328876995 0.9400131025504039 1.066254914471703 1.186692164905949 1.0883562441759542 1.1701011477007965 1.175590383363769 1.1256615054963741 1.1394148775807338 1.245160224403935 1.1358415528659729 1.0 14.370713509705876 -5.365780735555306 3.128722820105554 1.1295138591566776 0.930442170089621 0.4860782830422501 0.05992356849563496 0.2843957329922823 4.394729477154178 0.012015256393386424 0.11857469174684931 4.307440275117632e-06 5.365780735555306 -0.19907168906705652 QGS(ph)FTIEKPSPNIPIELIPHINK ddPTM_A549_PD325901_60min_R1 4 QGSFTIEKPSPNIPIELIPHINK 23 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 QGS(0.776)FT(0.224)IEKPSPNIPIELIPHINK;QGS(0.976)FT(0.02)IEKPS(0.004)PNIPIELIPHINK;QGS(0.859)FT(0.141)IEKPSPNIPIELIPHINK;QGS(0.702)FT(0.298)IEKPSPNIPIELIPHINK 239.57 1.2347999999999997e-98 776327000.0 101195.6 112500.0 115371.0 102041.0 135961.0 106476.0 119092.0 130672.0 122138.0 131353.0 125649.0 True False 111468.90281573645 121980.76981878436 123200.76984218236 108343.84081807484 126411.56839998675 105608.89475800535 123624.1112296429 128065.64444979916 117004.96460633627 123059.34916315686 110194.96955463619 1.0115607206594728 1.1069540679740795 1.1180253539713327 0.983201331748238 1.1471627871117125 0.9583821764717037 1.121867102729661 1.1621732368309468 1.0617995093534973 1.1167419861406862 1.0 16.749698840231282 -10.101523583222038 1.0306419310654598 1.0069507779067621 1.0753700525483203 0.0 0.07150238677106714 0.6085329750267191 1.295289692075976 0.022529732653313563 0.011270986584127425 7.915464706035246e-11 10.101523583222038 0.06841927464155817 QGS(ph)GRES(ph)PSLASR ddPTM_A549_PD325901_60min_R1 1 QGSGRESPSLASR 13 1 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 2 QGS(0.984)GRES(0.792)PS(0.21)LAS(0.014)R 40.186 0.032037 8155900.0 1004.3 928.57 1091.1 1050.0 1149.2 1029.7 1200.2 1211.2 1100.9 1415.6 1114.9 True False 1106.2557966734157 1006.8238527166986 1165.1486073173062 1114.8561152769814 1068.484156524774 1021.3144645959464 1245.8742677746409 1187.041665831981 1054.633001482876 1326.2187744121923 977.7743679334006 1.1314019194546592 1.0297098039547674 1.1916334131154769 1.1401977305186608 1.0927716982222548 1.0445297996045562 1.2741940355911452 1.2140241192258725 1.0786056948004494 1.3563648403007893 1.0 9.9333577757916 -9.400034048416561 1.5481340688533847 1.0218997372738976 1.1359992941161066 0.0 0.12224955384701132 0.2943240588292591 1.44890839222888 0.016364616629217198 0.013688764617748851 3.9807596042302335e-10 9.400034048416561 0.11409955684220896 QGS(ph)GVILR ddPTM_A549_MK2206_60min_R1 2 QGSGVILR 8 0 P46108-2;P46108;I3L297 P46108-2 CRK Adapter molecule crk 1 QGS(1)GVILR;QGS(1)GVILR 65.232 0.0090473 31184000.0 5607.5 5893.5 5545.2 5211.0 8533.5 6919.4 6264.1 7279.8 10152.1 9198.7 9370.0 True False 6553.908909787575 6193.453976826214 6331.5927425474865 6487.695233930683 7278.233454259092 7651.606315274016 7402.205886176253 8311.73394345248 7852.665559572383 7120.707281225396 7043.1704011558195 0.9305339124994115 0.8793559752309609 0.8989691263906437 0.9211327945247526 1.0333746082679893 1.0863866525248842 1.0509764019001322 1.1801125728959339 1.1149333485220976 1.011008803657065 1.0 12.782009272107295 -6.792782090077022 3.0164033844518316 1.0676862425259075 0.9011349085370601 0.7307866978081775 0.04737818944601235 0.12254928295883588 2.287209478751941 0.00836876313150162 0.01754561121791866 1.611453989296873e-07 6.792782090077022 -0.16655133398884736 QGS(ph)GVILRQEEAEYVR ddPTM_A549_MK2206_60min_R1 1 QGSGVILRQEEAEYVR 16 1 P46108-2;P46108 P46108-2 CRK Adapter molecule crk 1 QGS(1)GVILRQEEAEYVR 52.541000000000004 0.0071885000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QGS(ph)KVQESTKGPDEAK ddPTM_A549_PD325901_60min_R1 2 QGSKVQESTKGPDEAK 16 2 O43390-4;O43390;O43390-2;B4DT28;O43390-3 O43390-4 HNRNPR Heterogeneous nuclear ribonucleoprotein R 1 QGS(1)KVQESTKGPDEAK;QGS(0.997)KVQES(0.001)T(0.001)KGPDEAK 81.35600000000001 5.0938e-05 26008200.0 4556.5 4928.4 5087.0 5069.7 6019.4 4886.8 5563.3 5869.0 5629.7 5728.9 6071.1 True False 5019.07252568199 5343.733564221302 5432.23441061602 5382.843854875918 5596.618109802671 4847.003521013377 5775.014425854572 5751.93819085857 5393.103286809107 5367.176276299807 5324.393187873775 0.9426562518171745 1.0036324094906393 1.0202541808872891 1.0109779020706553 1.0511278773605384 0.910339141003402 1.0846333510844166 1.080299291937816 1.0129047755323213 1.0080352984680903 1.0 12.378401397844723 QGS(ph)PDQVS(ph)PVSEMTSTSLYQDK ddPTM_A549_MK2206_60min_R1 1 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QGS(0.999)PDQVS(0.996)PVS(0.004)EMT(0.001)STSLYQDK 78.836 3.2523e-05 3309900.0 893.75 919.36 570.26 721.0 913.56 1175.0 660.45 1018.3 1232.7 1001.8 1099.2 True False 1044.5931499104136 966.1514970959446 651.1314429353548 897.6450323669197 779.1765341856143 1299.3377200981254 780.4452159967279 1162.64714341296 953.4954182174012 775.4926842196829 826.2383036233163 1.2642758697212926 1.1693375783464222 0.7880673651656399 1.0864238905778907 0.9430409250801842 1.5725943888102483 0.9445764164820596 1.407157158309394 1.1540198681615488 0.9385823446079687 1.0 9.690414133491483 -5.52355440754374 24.999986029858455 1.0953086491844566 1.2405413962256664 0.05464353908528308 0.21385853158228307 44.53629640654644 1648010.1680046376 0.027025137966835488 0.10663862671425736 2.9953363191808628e-06 5.52355440754374 0.1452327470412098 QGS(ph)PDQVS(ph)PVSEMTSTSLYQDK ddPTM_A549_PD325901_60min_R1 2 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QGS(1)PDQVS(1)PVSEMTSTSLYQDK;QGS(0.999)PDQVS(0.937)PVS(0.057)EMT(0.004)S(0.001)T(0.001)SLYQDK 115.76 2.2241999999999997e-15 9363800.0 1943.11 1819.38 1870.5100000000002 1866.68 1838.73 2070.88 1753.6100000000001 2284.87 1739.4499999999998 2180.1 2150.8 True False 2140.3730967580223 1972.7055377146642 1997.454056890382 1981.9805840621304 1709.5839480741377 2054.015439878077 1820.3445881622124 2239.29647540416 1666.3469656003167 2042.4481139418058 1886.265235044541 1.1347148094512174 1.0458261654109753 1.0589465467422536 1.05074331395146 0.9063327448929889 1.088932458551925 0.9650522918741213 1.1871588543332734 0.8834107391906466 1.0828000622582523 1.0 10.88131683786438 -8.796004935029753 24.999906466345614 0.9449439728771706 1.0476320631138565 0.03939421127045917 0.08607852572407051 174.7537984784242 126391.80120755138 0.013354709938345042 0.014217527570711134 1.5995398524186962e-09 8.796004935029753 0.1026880902366859 QGS(ph)PDQVS(ph)PVSEMTSTSLYQDKQEGK ddPTM_A549_MK2206_60min_R1 3 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QGS(0.954)PDQVS(0.875)PVS(0.062)EMT(0.06)S(0.02)T(0.02)S(0.007)LY(0.001)QDKQEGK;QGS(0.814)PDQVS(0.533)PVS(0.448)EMT(0.115)S(0.039)T(0.037)S(0.011)LY(0.002)QDKQEGK;QGS(1)PDQVS(0.983)PVS(0.016)EMTSTSLYQDKQEGK 144.43 8.9694e-33 31944000.0 4140.37 4643.5 4555.3099999999995 3764.0 6275.7 4775.3 4057.07 3695.16 7592.2 6790.1 6932.3 True False 4839.163233672256 4879.834316007893 5201.321455683114 4686.18016897238 5352.552843369523 5280.619076412402 4794.187103435305 4218.960245952892 5872.5788222520905 5256.211694070741 5210.818588253201 0.9286762054202441 0.9364813288661692 0.9981774202250111 0.8993174660765357 1.0271999979880004 1.0133953019044941 0.9200449070023063 0.8096540254661208 1.1269973657288133 1.008711319545814 1.0 12.347294313681546 -8.78632238614326 24.999997108246276 1.0599709694609023 0.9464484734530733 0.3272158587012023 0.0649766763313766 184.70008447516298 185567.55054766234 0.012419383021332131 0.013224138735185683 1.635601928152269e-09 8.78632238614326 -0.11352249600782904 QGS(ph)PDQVS(ph)PVSEMTSTSLYQDKQEGK ddPTM_A549_PD325901_60min_R1 3 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QGS(0.977)PDQVS(0.962)PVS(0.03)EMT(0.025)S(0.005)T(0.001)SLYQDKQEGK;QGS(0.989)PDQVS(0.811)PVS(0.155)EMT(0.032)S(0.009)T(0.003)S(0.001)LYQDKQEGK;QGS(0.991)PDQVS(0.98)PVS(0.026)EMT(0.002)S(0.001)TSLYQDKQEGK 114.76 3.316e-17 37968000.0 3949.5 4936.0 4682.6 4287.2 5491.2 5285.6 5104.5 5573.7 5499.7 5480.9 5303.2 True False 4350.450332531768 5351.974042893506 5000.389394761269 4552.010607062355 5105.517055611593 5242.555826035093 5298.7545407895805 5462.528181016935 5268.566734721932 5134.835038623753 4650.9400197546065 0.9353916227802282 1.1507295342793706 1.0751352142840793 0.978729157488152 1.0977387439799686 1.1272034908572528 1.1392867932683324 1.1744998124712753 1.1327961040873438 1.1040424122465198 1.0 12.183306619114902 QGS(ph)PDQVSPVSEMTSTSLYQDK ddPTM_A549_MK2206_60min_R1 1 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.956)PDQVS(0.044)PVS(0.001)EMTSTSLYQDK 85.0 9.7207e-06 7537500.0 1951.7 1676.6 1801.6 1257.3 2721.2 1774.1 1752.5 2103.4 2436.3 2203.6 2443.6 True False 2281.0992455162573 1761.9317786623967 2057.0939704561715 1565.3385564423409 2320.9150847518426 1961.83408444773 2070.906565272566 2401.563391392341 1884.4819399716516 1705.8052295333343 1836.786680070901 1.2418966613086533 0.9592468182502201 1.1199416855400794 0.8522157599607146 1.2635735602472107 1.068079437712387 1.1274616632088315 1.307480840017655 1.0259666843288027 0.9286898952618109 1.0 10.842968369753628 -8.969340583605673 24.998653102560507 1.0114557245259368 1.110739231468234 0.16840902964476423 0.12728557712695932 282.41395642533655 230272.5941824019 0.02056256387974833 0.021672265781095757 1.0731474955969933e-09 8.969340583605673 0.09928350694229726 QGS(ph)PDQVSPVSEMTSTSLYQDKQEGK ddPTM_A549_MK2206_60min_R1 9 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(1)PDQVSPVSEMTSTSLYQDKQEGK;QGS(0.507)PDQVS(0.114)PVS(0.114)EMT(0.114)S(0.114)T(0.028)S(0.009)LYQDKQEGK;QGS(0.667)PDQVS(0.153)PVS(0.067)EMT(0.067)S(0.019)T(0.019)S(0.005)LY(0.001)QDKQEGK;QGS(0.394)PDQVS(0.216)PVS(0.077)EMT(0.077)S(0.077)T(0.077)S(0.077)LY(0.003)QDKQEGK;QGS(0.943)PDQVS(0.026)PVS(0.023)EMT(0.006)S(0.001)TSLYQDKQEGK;QGS(0.95)PDQVS(0.05)PVSEMTSTSLYQDKQEGK;QGS(0.536)PDQVS(0.221)PVS(0.221)EMT(0.014)S(0.004)T(0.004)S(0.001)LYQDKQEGK;QGS(1)PDQVSPVSEMTSTSLYQDKQEGK;QGS(0.994)PDQVS(0.006)PVSEMTSTSLYQDKQEGK 159.75 3.4340999999999997e-41 162912000.0 9710.47 10941.15 10984.28 9545.79 14912.999999999998 10438.6 10609.16 9494.019999999999 16501.6 16672.2 15597.369999999999 True False 11349.359937802032 11498.007801569891 12542.016073380504 11884.508978526801 12719.317455131642 11543.205723418114 12536.707044808623 10839.826409216841 12764.01394764035 12905.938440654225 11724.112563487262 0.9680357362951006 0.9807145521084866 1.069762509142096 1.013680900295948 1.0848853067773996 0.9845696773133558 1.0693096792547052 0.9245754295276575 1.0886976629166527 1.1008030135131555 1.0 13.51719110410589 -5.640240233611483 6.954048173510634 1.0351827268628835 0.9714257607791249 0.18568868300592 0.05092109141721281 0.24798166869043486 13.801800982532002 0.006501994449325041 0.025617855424026843 2.289600790656644e-06 5.640240233611483 -0.06375696608375858 QGS(ph)PDQVSPVSEMTSTSLYQDKQEGK ddPTM_A549_PD325901_60min_R1 4 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.998)PDQVS(0.002)PVSEMTSTSLYQDKQEGK;QGS(0.873)PDQVS(0.125)PVS(0.002)EMTSTSLYQDKQEGK;QGS(0.905)PDQVS(0.093)PVS(0.002)EMTSTSLYQDKQEGK;QGS(0.593)PDQVS(0.189)PVS(0.05)EMT(0.05)S(0.05)T(0.05)S(0.014)LY(0.004)QDKQEGK 179.41 1.9331999999999997e-49 223307000.0 7885.91 7677.700000000001 8574.000000000002 7189.09 9420.3 7872.799999999999 10529.0 10205.3 9967.8 9450.5 8357.69 True False 8686.481777899884 8324.726723890497 9155.88319965043 7633.143761691997 8758.650626270739 7808.686527018522 10929.68685668987 10001.747285597026 9548.88802995822 8853.793817167585 7329.747113762043 1.185099791722758 1.1357454213202416 1.2491403942790478 1.041392512350161 1.1949458133181488 1.0653418741224019 1.4911410567178671 1.364541931715235 1.3027581827522543 1.2079262326177738 1.0 12.839547708939996 -10.862846884972479 1.1683944489324667 1.0028050725919333 1.2296508373070194 0.03347958771480575 0.13661376800016076 0.4790896366090502 1.1835700710274975 0.0850060352655363 0.021715829259739597 1.3713651699706163e-11 10.862846884972479 0.2268457647150861 QGS(ph)PGSVSK ddPTM_A549_MK2206_60min_R1 2 QGSPGSVSK 9 0 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 1 QGS(0.673)PGS(0.231)VS(0.096)K;QGS(0.973)PGS(0.025)VS(0.001)K 126.34 6.234800000000001e-05 1276460000.0 21256.0 22593.5 20682.8 14691.1 27979.0 22815.1 22397.6 22114.5 29996.0 29308.0 27375.0 True False 24843.493140694543 23743.412645358963 23615.932044932782 18290.420159508536 23863.326163557183 25229.378738562333 26466.954000769663 25249.298097815863 23201.953893769096 22687.30244471 20577.031988435483 1.207340939872031 1.1538793669904883 1.1476840808822766 0.8888755273252212 1.1597069089929313 1.226094159388075 1.2862376855731372 1.2270621978916223 1.127565623011562 1.1025546569330558 1.0 14.328747283824006 -10.093223939091047 0.9553847783327225 1.012900324562234 1.155967793537202 0.12352246919172627 0.10010149372678775 0.5449822252142121 0.9967560718566094 0.04149154020262923 0.019890632866012718 8.068188958329522e-11 10.093223939091047 0.14306746897496803 QGS(ph)PGSVSK ddPTM_A549_PD325901_60min_R1 3 QGSPGSVSK 9 0 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 1 QGS(0.999)PGS(0.001)VSK;QGS(0.999)PGS(0.001)VSK;QGS(0.943)PGS(0.053)VS(0.004)K 152.69 1.8379e-05 1839199800.0 25541.300000000003 27082.0 27526.0 22639.600000000002 30537.3 21785.399999999998 24285.3 25440.899999999998 27719.7 29387.3 26776.7 True False 28134.233973488717 29364.295184287254 29394.079887284544 24037.996673737856 28392.46539596589 21607.986925326346 25209.49038092606 24933.461291500047 26554.737406853383 27531.780862731994 23483.335651486494 1.1980510090655636 1.2504311832049506 1.2516995167772897 1.0236193456706075 1.2090473779932813 0.9201412970460422 1.0735055170635566 1.061751263173797 1.1307906934921517 1.1723965143337391 1.0 14.519349727778588 -6.256969272336451 24.827501137211392 1.0621941482623172 1.2350976429252023 0.4519277904022899 0.07743759968463322 205.455043175751 1141115.0346319012 0.010136436166295809 0.025821078143882504 5.533892618142987e-07 6.256969272336451 0.17290349466288513 QGS(ph)PSQSLVACECEASK ddPTM_A549_MK2206_60min_R1 1 QGSPSQSLVACECEASK 17 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 QGS(0.49)PS(0.49)QS(0.02)LVACECEASK 118.24 1.1804e-09 4748500.0 717.15 1364.5 1282.7 780.24 1279.2 980.8 1115.4 1010.2 1230.1 1674.4 1625.4 True False 838.1873873658773 1433.9472217492787 1464.6061478153467 971.3988350263048 1091.0313745459928 1084.587604997652 1318.053742028543 1153.3989436077502 951.4843140660547 1296.1518770786956 1221.7683212421196 0.6860444593241115 1.1736654133342121 1.1987593084148265 0.7950761352518334 0.8929936679294385 0.8877195341707651 1.0788082479406031 0.9440406364728289 0.778776382987833 1.0608818828769053 1.0 10.254755023596553 -6.277085426525055 24.8608709417807 0.9038830686114657 1.0349073216826743 0.0419939954302041 0.15426530192721769 1133.3379273999726 1800821.8690150117 0.021084388374669867 0.049171104582014416 5.283413158426888e-07 6.277085426525055 0.13102425307120857 QGS(ph)PTPALPEKR ddPTM_A549_MK2206_60min_R1 2 QGSPTPALPEKR 12 1 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 QGS(0.754)PT(0.246)PALPEKR;QGS(0.581)PT(0.419)PALPEKR 74.33800000000001 0.00055806 32094000.0 7889.400000000001 7927.9 8042.9 7161.3 10891.900000000001 8126.299999999999 7456.1 8484.099999999999 10660.0 11148.900000000001 11532.4 True False 9220.93784268891 8331.396247201248 9183.504160180917 8915.81882148297 9289.715938412688 8986.219672198635 8810.776856678332 9686.747156466552 8245.527020522022 8630.355746752673 8668.586801951898 1.0637186952563755 0.9611020155355974 1.0594003809378796 1.0285204526619498 1.0716528715292937 1.036641828420662 1.0164029106444914 1.1174540184895414 0.9511962225106154 0.9955897015196737 1.0 13.081581101639097 -8.798088863056291 24.999986914977775 0.9769537670079651 1.041280120488178 0.3357237914129233 0.03853031411566411 129.23203426779264 88153.46975729581 0.006578158463490535 0.007003104540697748 1.5918829709909362e-09 8.798088863056291 0.06432635348021298 QGS(ph)PTPALPEKR ddPTM_A549_PD325901_60min_R1 1 QGSPTPALPEKR 12 1 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 QGS(0.839)PT(0.161)PALPEKR 96.666 0.00010701 30693000.0 3901.3 4582.0 5151.0 3721.8 6378.7 4594.4 5180.2 5335.4 5435.0 6030.3 5575.5 True False 4297.3571040147335 4968.141220530399 5500.577835479285 3951.6871331789225 5930.68211732038 4556.984729668463 5377.3353457142075 5228.98126145967 5206.585850721621 5649.545828862566 4889.748846006527 0.8788502721411547 1.0160319838488014 1.124920319777083 0.8081574857175492 1.2128807233451235 0.9319465831849761 1.0997160621257458 1.0693762453116984 1.0647961714790026 1.1553856868285919 1.0 12.25554465005919 -6.758749932493021 24.99980218531296 1.042483239087471 0.9732023744394945 0.18304662930068338 0.1050095389085224 125.08230788187726 1162682.1545847661 0.013037146903970927 0.026210363567867344 1.7428100975758254e-07 6.758749932493021 -0.06928086464797645 QGS(ph)PVAAGAPAK ddPTM_A549_MK2206_60min_R1 5 QGSPVAAGAPAK 12 0 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 1 QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK 139.49 9.296900000000001e-10 5501989300.0 44220.5 51223.700000000004 49424.2 41594.56 60580.6 44544.1 45399.700000000004 46233.76 67348.2 65824.0 62727.0 True False 51683.839312574455 53830.76753588751 56433.29474612562 51785.22906725077 51669.27399063553 49257.72709601946 53648.23782676459 52787.53706495173 52093.94023297572 50954.31268324663 47150.15472287096 1.0961541826607062 1.1416880358565613 1.1968846142248546 1.098304541557135 1.0958452691051828 1.0446991613396803 1.1378167927992318 1.1195623296511954 1.1048519467043594 1.0806817704572749 1.0 15.524974884650296 -14.999969588767017 0.18918926502295572 0.4727203491481276 1.1384504850021384 0.21507244508990464 0.043405075087288664 24.87696671976537 0.28425536120561284 4.827020968346286 0.03655888753868998 1.0000700269034942e-15 14.999969588767017 0.6657301358540109 QGS(ph)PVAAGAPAK ddPTM_A549_PD325901_60min_R1 6 QGSPVAAGAPAK 12 0 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 1 QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK 136.63 2.8155e-08 8658975000.0 80375.5 79751.7 85057.49999999999 72696.30000000002 96735.0 74269.0 88340.0 93221.09999999999 86693.2 87943.40000000001 89079.6 True False 88535.1615906843 86472.65564761548 90830.01344229827 77186.58534572378 89940.66731763324 73664.17788780849 91701.82704150271 91361.73202996199 83049.786287724 82390.63871548537 78123.37392210966 1.1332736560885783 1.106873030520036 1.1626483711885938 0.9880088566410371 1.1512645038513778 0.9429211027323645 1.1738078175288613 1.1694545107722971 1.063059390785222 1.0546221262490563 1.0 16.253466635937325 -9.641093076537052 1.1433957712298668 1.0125122002648546 1.0991302596313492 0.12159161230412385 0.07285067017309838 0.4669208102486204 1.255766353887976 0.019098955068034038 0.013359326100695288 2.2851090139910197e-10 9.641093076537052 0.08661805936649469 QGS(ph)PVEPK ddPTM_A549_MK2206_60min_R1 2 QGSPVEPK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 QGS(1)PVEPK;QGS(1)PVEPK 102.4 0.0022207 107678000.0 12918.2 14719.1 13599.8 12314.7 16389.8 11494.7 12041.3 11847.2 17141.9 17948.8 18479.6 True False 15098.476340333098 15468.239319640745 15528.45613865998 15331.802052827883 13978.88213143677 12711.061524435667 14229.048344888184 13526.576880528348 13259.287019989344 13894.153614017008 13890.605308986025 1.086955968043069 1.1135756128377017 1.1179106880687486 1.1037533434852926 1.0063551458332516 0.9150833417038137 1.0243648875174083 0.9737931918472853 0.9545506999188673 1.0002554463935915 1.0 13.761821848360817 -6.818567406341028 4.030657324524049 0.976990800739224 1.1079643144409521 0.825056466809888 0.027551261301578266 0.06321702394487203 2.086667814611236 0.003996772453734184 0.007976756761546522 1.518562229463883e-07 6.818567406341028 0.13097351370172816 QGS(ph)PVEPK ddPTM_A549_PD325901_60min_R1 2 QGSPVEPK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 QGS(1)PVEPK;QGS(1)PVEPK 99.5 0.0024081 139952000.0 19399.3 19786.5 19361.5 17333.300000000003 21852.0 17334.9 19871.2 19261.5 20187.9 21795.6 21169.0 True False 21368.702654990153 21453.97779572778 20675.487820157672 18403.938574219534 20317.19090530748 17193.73032176777 20627.40938993786 18877.314272145555 19339.472768313335 20419.422096339636 18565.347201347362 1.1509993550478463 1.1555925974910277 1.1136601753753987 0.9913059192819128 1.0943609448808467 0.926119513699154 1.1110704888105107 1.0168037294112955 1.0416973385183872 1.0998675044901782 1.0 14.180324675672786 -6.094437873994159 3.908324283713697 1.0236128860016351 1.1507267106705141 0.4412367787339463 0.052356332126290935 0.11534088749626935 3.171251987869754 0.0059568769207306435 0.017348578055585637 8.045668339398694e-07 6.094437873994159 0.127113824668879 QGS(ph)SAEQPLGGR ddPTM_A549_MK2206_60min_R1 2 QGSSAEQPLGGR 12 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 QGS(0.966)S(0.034)AEQPLGGR;QGS(0.949)S(0.051)AEQPLGGR 98.94200000000001 0.00024978 7255900.0 1725.24 1918.78 1552.87 1512.74 2334.8 1901.5300000000002 1772.72 1735.06 2273.6 2205.4 2772.63 True False 2016.4183339316828 2016.437706227981 1773.0903163311903 1883.361367909478 1991.3540128908583 2102.748642466542 2094.8002775406467 1981.0100683984003 1758.6332301931402 1707.1986082831793 2084.1094503048716 0.967520363979307 0.9675296592187174 0.8507664105989327 0.9036768043223319 0.9554939701461241 1.0089434804678534 1.005129686079688 0.9505307257776747 0.8438295934677905 0.819150168928721 1.0 11.025215329680483 QGS(ph)SAEQPLGGR ddPTM_A549_PD325901_60min_R1 1 QGSSAEQPLGGR 12 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 QGS(0.945)S(0.055)AEQPLGGR 70.438 0.0030611 4345700.0 1655.9 2080.2 2095.2 1857.7 2746.4 1805.0 1688.9 1623.4 2410.4 2150.3 1972.5 True False 1824.0057489908493 2255.5057544625356 2237.3928714611125 1972.4459098571901 2553.502338565646 1790.3006784458435 1753.1720137015418 1591.0200134673364 2309.099270391792 2014.5296910275063 1729.8950047077171 1.0544025758945024 1.3038396829428534 1.2933691729106658 1.140211344902088 1.4761024984849214 1.0349186936627592 1.0134557351344902 0.9197205663566588 1.334820474137352 1.1645387064215964 1.0 10.756468761377096 QGS(ph)VVSSR ddPTM_A549_MK2206_60min_R1 2 QGSVVSSR 8 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 QGS(0.966)VVS(0.031)S(0.004)R;QGS(0.999)VVS(0.001)SR 129.39 0.0010677 42370000.0 4961.6 6451.799999999999 5660.1 4707.6 6901.2 5029.5 4928.200000000001 5219.200000000001 7226.1 7476.1 7296.5 True False 5798.996780526441 6780.169062134112 6462.787290285841 5860.962211332192 5886.042621964357 5561.718351688097 5823.590148345939 5959.037583129646 5589.3998877105205 5787.24381762305 5484.577676844544 1.0573278604493743 1.2362244573104422 1.178356415220669 1.0686259830135534 1.0731988803467525 1.0140650163765998 1.0618119555371928 1.0865080110521972 1.0191121754567407 1.0551849492544045 1.0 12.421164819241433 -6.596398166016129 1.6492099512316907 1.0210115240853725 1.164478118207478 0.4584186058311851 0.04968222370683657 0.1884590772250944 1.018528180586052 0.007168335691985272 0.019864839270025792 2.5328054614615297e-07 6.596398166016129 0.14346659412210538 QGS(ph)VVSSR ddPTM_A549_PD325901_60min_R1 2 QGSVVSSR 8 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 QGS(0.965)VVS(0.034)S(0.001)R;QGS(0.923)VVS(0.076)S(0.002)R 112.93 0.0014007 47987000.0 6179.7 7091.7 6698.8 5237.2 8809.099999999999 5577.2 6731.8 7131.200000000001 6630.6 6837.6 7097.3 True False 6807.058594745304 7689.342447323316 7153.420851156791 5560.689949455819 8190.379205745202 5531.781132314767 6987.982332782304 6988.962621681826 6351.938940532614 6405.872769087886 6224.377093491544 1.0936128214119667 1.2353593511170136 1.1492589127732464 0.8933729216487056 1.3158552386405682 0.8887284702109417 1.1226797843095362 1.1228372761974468 1.020493913708161 1.0291588496118145 1.0 12.603713750903651 -2.038163263402812 0.12736170234325098 0.962838439314573 1.6252008597426728 0.10042955487235605 0.11871613485820723 96.3158220719382 0.8088637202699167 0.32096188190254055 11.479616031223873 0.00915876122030622 2.038163263402812 0.6623624204280998 QGS(ph)YSPALPLQPLGGHK ddPTM_A549_MK2206_60min_R1 2 QGSYSPALPLQPLGGHK 17 0 Q6ZRI6;H3BMJ2;Q6ZRI6-2 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 1 QGS(0.58)Y(0.003)S(0.417)PALPLQPLGGHK;QGS(0.618)Y(0.002)S(0.379)PALPLQPLGGHK 66.325 0.00068676 4313000.0 1795.58 1996.9499999999998 2151.5 2249.37 2774.2 2079.3 2395.2 2173.69 3219.1000000000004 2936.3999999999996 2900.2 True False 2098.6300062837936 2098.5862253369146 2456.6150518630393 2800.465750978055 2366.118854960517 2299.330145872367 2830.3768360290164 2481.817214146438 2489.978989846384 2273.0652005816296 2180.000298551983 0.9626741829704161 0.962654099970011 1.1268874841415348 1.2846171410335137 1.0853754728988612 1.0547384545771146 1.2983378203704978 1.1384481074589439 1.1421920407535253 1.04269031618549 1.0 11.090112617242012 -2.061499601083456 19.25705715462918 1.0919369647687736 0.00547555350773643 0.0 0.10928058444039712 0.0 0.0 0.01509899834842526 0.0 0.008679613745486344 2.061499601083456 -1.0864614112610371 QGSES(ph)PAQAGR ddPTM_A549_PD325901_60min_R1 2 QGSESPAQAGR 11 0 Q92817;K7EKI0 Q92817 EVPL Envoplakin 1 QGS(0.093)ES(0.907)PAQAGR;QGS(0.282)ES(0.718)PAQAGR 51.135 0.025178 12397900.0 1399.1999999999998 1339.74 1522.15 1254.42 2117.62 1033.04 1382.8 1610.17 1551.71 1426.79 1260.44 True False 1541.2457539634004 1452.6445916179387 1625.4522524315253 1331.9026744054765 1968.885676592405 1024.62726474332 1435.423210697194 1578.053896196071 1486.4970249168805 1336.7022359024957 1105.4138705874743 1.3942703226116588 1.314118295662355 1.4704467672073587 1.204890502864447 1.7811298817392591 0.9269173221055927 1.298539170613388 1.4275683869946478 1.344742511804089 1.2092323712132387 1.0 10.110370905187496 -11.089928042343509 0.4300987887401945 0.8483496069780402 1.3671100441849968 0.14455484620057002 0.20376655790704268 2.368491842048947 0.45520879316509716 0.5632893458295632 0.049404048119419265 8.129652040942601e-12 11.089928042343509 0.5187604372069566 QGSFS(ph)EDVISHK ddPTM_A549_MK2206_60min_R1 1 QGSFSEDVISHK 12 0 H3BPE1;H3BQK9;E9PNZ4;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 QGS(0.045)FS(0.955)EDVISHK 167.69 4.5458e-16 119540000.0 1932.9 1993.4 2257.2 2200.2 2728.2 1810.9 1950.7 2105.3 3245.9 3188.0 3752.1 True False 2259.126265132128 2094.855545500191 2577.304901262026 2739.2490987707306 2326.885394024686 2002.5282360218669 2305.1169397302106 2403.732722210845 2510.7088326371877 2467.8285858378417 2820.350017308083 0.8010091837070558 0.7427643847906691 0.9138244847077405 0.9712443781659554 0.8250342616146664 0.7100282673188217 0.8173159095800305 0.852281705270439 0.890211788334543 0.8750079141571551 1.0 11.461658502924085 -9.668496906325421 0.6988961761707971 0.9898685193182942 0.8280630927359784 0.18294818489424514 0.07635406475492697 0.4445427403574756 0.46437268236534207 0.03154652659157193 0.017078739330061286 2.14537439822632e-10 9.668496906325421 -0.16180542658231578 QGSFS(ph)EDVISHK ddPTM_A549_PD325901_60min_R1 2 QGSFSEDVISHK 12 0 H3BPE1;H3BQK9;E9PNZ4;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 QGS(0.061)FS(0.939)EDVISHK;QGS(0.023)FS(0.977)EDVISHK 178.47 8.3231e-17 404150000.0 5145.6 4662.9 5060.799999999999 4812.3 5810.5 4339.6 4672.0 5194.5 5402.4 4937.9 5499.200000000001 True False 5667.97752400949 5055.8589474489745 5404.256321062619 5109.544841473731 5402.390525136795 4304.259736389792 4849.795516616498 5090.891622493581 5175.355915352067 4626.120151292711 4822.833262300974 1.1752381257537603 1.0483171763306667 1.120556325947758 1.0594487853050858 1.1201694587631907 0.8924753360302218 1.0055905424983862 1.0555810963418455 1.0730945139253902 0.9592121269159508 1.0 12.235665217961209 -2.0000000000220495 0.46339443471231634 1.0286694417205324 4.285373058873192 0.35179466812102933 0.061230893191677155 74.71168428990289 0.7739925208584032 0.011576628623214198 234.16073832790354 0.009999999999492292 2.0000000000220495 3.25670361715266 QGSFT(ph)IEKPSPNIPIELIPHINK ddPTM_A549_MK2206_60min_R1 2 QGSFTIEKPSPNIPIELIPHINK 23 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 QGS(0.305)FT(0.695)IEKPSPNIPIELIPHINK;QGS(0.341)FT(0.466)IEKPS(0.193)PNIPIELIPHINK 234.53 1.1133999999999998e-89 270652000.0 37514.0 44801.0 40933.0 38617.0 59397.0 46985.0 43969.0 42632.0 68067.0 61868.0 60865.0 True False 43845.446070757214 47081.17953945723 46737.9149049081 48078.16673358303 50659.77998273013 51956.92151388121 51957.598156045366 48675.21655502438 52649.933180663436 47891.975830807925 45750.540711456655 0.9583590792354859 1.0290846579583126 1.0215816945132672 1.050876470221553 1.1073045082075745 1.1356569934674101 1.135671783285271 1.0639265853055884 1.1508046104355454 1.0468067718118799 1.0 15.4815011738123 -5.790188603198595 1.148455930743491 1.0833723039967231 0.9628127142697553 0.4456292753004485 0.044004580558630144 0.8064172061034531 1.4779633016856728 0.009041171648168584 0.09274560168647442 1.621105938829323e-06 5.790188603198595 -0.12055958972696779 QGSFTIEKPSPNIPIELIPHINK ddPTM_A549_MK2206_60min_R1 2 QGSFTIEKPSPNIPIELIPHINK 23 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 0 ; 116.24 1.2354e-14 23071000.0 3008.8 3343.8999999999996 3679.9 3018.3 4501.9 3788.1000000000004 3231.1 3275.6 5417.4 5076.700000000001 5213.0 False True 3516.6118819026033 3514.090227048305 4201.765154241598 3757.7836354966353 3839.676473630871 4188.954227662728 3818.14904596416 3739.926331104281 4190.367549810131 3929.8699440787236 3918.468228519238 0.8974455518889091 0.896802021124529 1.0722978748839864 0.958993008580977 0.9798922052461959 1.069028503835976 0.974398367753772 0.9544357930184298 1.069389186139616 1.0029097379114884 1.0 11.936074084156758 -3.566469626866766 0.5535015552044071 1.024442972886067 4.669472326053519e-10 0.32674558278759347 0.049102340442119606 14.333835800791578 0.6791582781503032 0.008791877338473197 14.377020236927365 0.00027135034190539637 3.566469626866766 -1.0244429724191197 QGSFTIEKPSPNIPIELIPHINK ddPTM_A549_PD325901_60min_R1 2 QGSFTIEKPSPNIPIELIPHINK 23 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 0 ; 120.85 7.1148e-15 17698600.0 5507.4 5193.0 4752.5 4423.1 5271.4 5257.9 5565.5 5925.9 5597.799999999999 5855.3 5266.700000000001 False True 6066.507193666409 5630.6323348350825 5075.033229104112 4696.304841411063 4901.155049342755 5215.081405651187 5777.298148058456 5807.703275721379 5362.543932873866 5485.595358728247 4618.929288362044 1.3134011834629542 1.219034105809359 1.0987466818102798 1.016751837540353 1.0611019877900736 1.1290671668845897 1.2507873118159796 1.257370033863605 1.1609928617841043 1.1876335436764263 1.0 12.173342744659323 -10.479142107863257 0.9129579259547554 1.0044660708691293 1.1617442842041847 0.0 0.10072815767664885 0.5558000725419082 0.8651464907882641 0.05356997081878606 0.017358980657069274 3.317858743251719e-11 10.479142107863257 0.15727821333505543 QGSGPAPTT(ph)HKGTPK ddPTM_A549_MK2206_60min_R1 1 QGSGPAPTTHKGTPK 15 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 QGS(0.001)GPAPT(0.023)T(0.675)HKGT(0.301)PK 93.37100000000001 1.3915e-05 25804000.0 1894.3 1873.3 1604.7 1788.0 2492.0 2119.7 2028.5 2018.8 3116.2 3229.5 3366.2 True False 2214.0115288115207 1968.6429684887673 1832.2705896930597 2226.0600802663707 2125.430101132439 2344.005247057017 2397.0521926707006 2304.9710823157056 2410.3856755488473 2499.953707014839 2530.279637606266 0.8750066577250148 0.7780337553327399 0.7241375863999177 0.8797684047176312 0.8399981051672103 0.9263818955894254 0.9473467505506216 0.9109550770824246 0.9526163194472677 0.9880147908789574 1.0 11.305081119974579 -7.371412942165942 0.5586267314354778 0.9833629417416224 0.7834942613624247 0.7129751514942196 0.04378160754462265 0.3391458028905896 0.20228236228334834 0.010116007374604602 0.02891360891990275 4.251939318176529e-08 7.371412942165942 -0.1998686803791977 QGSGPAPTT(ph)HKGTPK ddPTM_A549_PD325901_60min_R1 1 QGSGPAPTTHKGTPK 15 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 QGSGPAPT(0.001)T(0.629)HKGT(0.37)PK 121.26 2.8902e-07 22227000.0 2203.5 2183.8 2073.5 2351.9 2775.2 2243.8 2298.3 2592.2 2580.7 2341.1 2694.9 True False 2427.1976978690363 2367.836490046768 2214.220178968413 2497.1715214475544 2580.2795259202526 2225.527236729519 2385.7630641780174 2540.496537458438 2472.2421536259944 2193.2825464653743 2363.444384378617 1.0269747466501866 1.0018583494907607 0.9368615540959991 1.0565814613421065 1.0917453962423764 0.9416456978803169 1.0094432853791346 1.0749127647132557 1.0460335643886884 0.9280026054186248 1.0 11.206675200839419 -6.286918254134083 24.95381638053271 1.0262381613100002 0.9898941990937888 0.04696712095367117 0.052293037446799036 1174.2920958417506 1150090.5986209477 0.006186066963545839 0.0143789281905325 5.165135818277835e-07 6.286918254134083 -0.03634396221621139 QGSGPAPTTHKGT(ph)PK ddPTM_A549_MK2206_60min_R1 1 QGSGPAPTTHKGTPK 15 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 QGSGPAPT(0.013)T(0.282)HKGT(0.704)PK 103.99 3.2904000000000003e-06 19680000.0 1780.8 1827.1 1891.4 1459.3 2824.3 2189.3 1972.4 2077.5 2744.9 2615.2 3254.5 True False 2081.3555036200996 1920.0915858249225 2159.6289607686494 1816.8285655104662 2408.8492113275875 2420.9702728602765 2330.7595488408624 2371.991987076916 2123.1845327045867 2024.424503664718 2446.317830369433 0.8508115657668986 0.7848904839707431 0.8828080039144018 0.7426788714678567 0.9846836667841369 0.9896384855661504 0.952762359782531 0.9696172580807733 0.8679103370570421 0.8275394466462265 1.0 11.25639613844964 -6.771785119830249 24.99052645033072 0.9466251856525212 0.8179475129837763 0.5085501742685334 0.059647677362197796 121.66356791952927 293883.33204515494 0.008378997530203231 0.015958512104356174 1.691277534747336e-07 6.771785119830249 -0.12867767266874486 QGSGPAPTTHKGT(ph)PK ddPTM_A549_PD325901_60min_R1 1 QGSGPAPTTHKGTPK 15 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5 A0A2R8Y7K2 SPAST Spastin 1 QGSGPAPTT(0.037)HKGT(0.963)PK 129.2 1.6935999999999998e-09 21086000.0 2612.6 2507.6 2827.3 2131.5 3709.1 2736.8 2543.3 2789.2 2268.7 2877.4 3116.4 True False 2877.8292287055333 2718.9242524229658 3019.1775799360457 2263.157914012272 3448.585611700348 2714.512408183149 2640.086673247162 2733.5672179149306 2173.3544286167676 2695.7204729398436 2733.102556487262 1.0529532533913701 0.9948123775924022 1.1046704313271227 0.8280545157884638 1.2617841959551879 0.993198151946407 0.9659669253832723 1.0001700124375374 0.7951968079127208 0.9863224731692967 1.0 11.416323880988475 -8.16024349776119 1.8491323483826858 0.905609763302588 1.0385800232646374 0.11945195675819464 0.11145934306495899 0.40879176157889435 2.742199226033646 0.01985616401809745 0.02649946476873493 6.914431877833366e-09 8.16024349776119 0.13297025996204936 QGSGRES(ph)PSLASR ddPTM_A549_MK2206_60min_R1 11 QGSGRESPSLASR 13 1 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 QGSGRES(0.995)PS(0.005)LASR;QGS(0.061)GRES(0.939)PSLASR;QGSGRES(1)PSLASR;QGS(0.07)GRES(0.917)PS(0.012)LAS(0.002)R;QGSGRES(0.929)PS(0.071)LASR;QGS(0.001)GRES(0.973)PS(0.017)LAS(0.009)R;QGSGRES(0.992)PS(0.008)LASR;QGS(0.002)GRES(0.981)PS(0.017)LASR;QGS(0.006)GRES(0.993)PS(0.002)LASR;QGSGRES(0.926)PS(0.074)LASR;QGS(0.012)GRES(0.973)PS(0.014)LASR 155.2 6.980300000000001e-19 3697735800.0 25006.5 26697.139999999996 24292.679999999997 22460.760000000002 29726.4 23917.25 23308.9 21965.640000000003 33519.399999999994 38631.21000000001 38578.2 True False 29226.985849773133 28055.910393295344 27737.747310291514 27963.64720830185 25353.68593832396 26448.157520014352 27543.82541471141 25079.336736951238 25927.309419482735 29904.392830459437 28998.16823584518 1.0078907609634842 0.9675062978155602 0.9565344639943278 0.9643246077086849 0.8743202581666449 0.9120630415310609 0.9498470796739489 0.8648593432860424 0.8941016276825894 1.0312510979053517 1.0 14.82367415011631 -5.429413801398785 1.2129845358840388 0.9358527972875261 1.0249944145219803 0.16701908015872258 0.04804276316250938 1.6737767574391667 2.5039770755361466 0.007366465606953537 0.17229080820146125 3.720370556056603e-06 5.429413801398785 0.08914161723445413 QGSGRES(ph)PSLASR ddPTM_A549_PD325901_60min_R1 12 QGSGRESPSLASR 13 1 H3BUF6;H3BSK9;Q8WWM7-7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 QGS(0.001)GRES(0.978)PS(0.022)LASR;QGS(0.095)GRES(0.802)PS(0.077)LAS(0.026)R;QGS(0.001)GRES(0.978)PS(0.022)LASR;QGS(0.473)GRES(0.527)PS(0.001)LASR;QGSGRES(0.999)PS(0.001)LASR;QGS(0.008)GRES(0.922)PS(0.07)LAS(0.001)R;QGSGRES(0.995)PS(0.005)LASR;QGS(0.217)GRES(0.767)PS(0.005)LAS(0.011)R;QGS(0.003)GRES(0.994)PS(0.004)LASR;QGS(0.001)GRES(0.971)PS(0.028)LASR;QGS(0.008)GRES(0.94)PS(0.049)LAS(0.003)R;QGSGRES(0.855)PS(0.145)LASR 149.09 2.9155e-13 4412804700.0 32278.72 35328.16 32228.73 28730.35 39306.97 31856.409999999996 33454.27 35970.50000000001 34810.45999999999 35252.58 37290.9 True False 35555.63189206225 38305.388027388304 34415.96542489736 30504.958468140972 36546.18402888497 31596.981958919056 34727.39055172897 35253.04015918867 33347.49742283549 33026.726082557056 32704.355706491733 1.087183377381275 1.1712625795525085 1.0523358336047537 0.9327491035723359 1.1174714572233766 0.9661398696396619 1.0618582693813983 1.07793103999878 1.0196653229348314 1.0098571082995325 1.0 14.997195172388235 -5.937473379337604 6.321389847044501 1.0178110287319935 1.1271628188268636 0.3769573302758843 0.05165970376517651 0.13240601330503046 10.07931518412616 0.006455118167972843 0.02043050165381332 1.1548527707685201e-06 5.937473379337604 0.10935179009487017 QGSITS(ph)PQANEQS(ph)VTPQRR ddPTM_A549_MK2206_60min_R1 1 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.006)IT(0.144)S(0.827)PQANEQS(0.561)VT(0.462)PQRR 46.621 0.034582999999999996 5490100.0 453.03 374.81 382.04 214.95 409.69 280.24 315.75 219.47 429.67 345.45 304.19 True False 529.4903884799044 393.8862280570516 436.21901669242646 267.6127596494721 349.42514371306123 309.8948107917432 373.11768786579927 250.58054459868634 332.35043104199804 267.4126050745553 228.65122778309376 2.3157119846397536 1.7226508332188153 1.9077921466760654 1.1703972125762585 1.528201475675161 1.3553166269709247 1.6318201808203332 1.0959072777706467 1.453525678669335 1.1695218419217581 1.0 7.837004855745864 -2.0000000000000004 0.2612950388316737 1.1566218108530555 8.06573537473199 0.7015705853561571 0.20517295694972898 19.62328304874907 0.2409791052787242 0.09218290869847329 61.477089303593644 0.00999999999999999 2.0000000000000004 6.909113563878934 QGSITS(ph)PQANEQS(ph)VTPQRR ddPTM_A549_PD325901_60min_R1 1 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.004)IT(0.12)S(0.876)PQANEQS(0.892)VT(0.107)PQRR 69.52199999999999 0.0020280999999999997 2722000.0 491.28 321.56 496.59 407.62 671.29 580.07 340.77 626.3 542.38 480.9 610.53 True False 541.1543839387789 348.658989714918 530.2915836382559 432.7977616278125 624.140906224779 575.3461022415956 353.738188826499 613.8079551771546 519.5856547772568 450.5358919290925 535.4386804685431 1.0106748049379515 0.6511651145745 0.9903871404550318 0.8083049981541991 1.1656627154366503 1.0745321980439122 0.6606511664733588 1.1463646119851358 0.9703924533852991 0.8414332179640902 1.0 9.064577553827068 -6.697893280808607 24.999989278277102 0.9902001703446539 0.8587961416067139 0.10442478858596294 0.15941733154144905 91.29867574287839 35917.24308119932 0.019832261581981505 0.0412841388896952 2.0049646468382242e-07 6.697893280808607 -0.13140402873794 QGSITS(ph)PQANEQSVT(ph)PQR ddPTM_A549_MK2206_60min_R1 1 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.006)IT(0.152)S(0.84)PQANEQS(0.218)VT(0.783)PQR 66.12 0.003201 5231800.0 501.98 414.24 334.03 395.78 716.14 519.67 517.36 562.87 625.25 844.12 1153.8 True False 586.7019517673056 435.32304663790467 381.4004767714667 492.746117767239 610.7967546649214 574.6611344709723 611.357615183689 642.6585462170799 483.6318733190803 653.4327057331994 867.279616739976 0.6764853461824274 0.5019408253525476 0.43976644834005885 0.5681513876913494 0.704267392978576 0.6626019145141108 0.7049140823598804 0.7410050159287429 0.5576423842831771 0.7534279523245256 1.0 9.760353392734435 -14.99999999999836 0.251626653303312 3.51718736729038 0.5700003786535053 0.3559959729947273 0.11536195960354838 17.777204697098803 0.22904988995658962 22.32241494803549 0.048602186841304754 1.0000000000037752e-15 14.99999999999836 -2.947186988636875 QGSITS(ph)PQANEQSVT(ph)PQR ddPTM_A549_PD325901_60min_R1 2 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.015)IT(0.202)S(0.783)PQANEQS(0.127)VT(0.873)PQR;QGS(0.072)IT(0.104)S(0.823)PQANEQS(0.018)VT(0.983)PQR 91.589 7.844500000000001e-06 13057300.0 1616.85 1474.16 1989.81 1561.7800000000002 2415.97 1597.8400000000001 1521.24 1677.1999999999998 1680.45 1520.63 1195.82 True False 1780.9914217379385 1598.3926367649697 2124.8504722995585 1658.2476035402703 2246.2806018440306 1584.827720802164 1579.13162065447 1643.7469302620536 1609.8265304222896 1424.6171622876607 1048.741720927544 1.698217383935834 1.5241051298610444 2.0260951098810733 1.581178254330969 2.1418816063285258 1.5111706621154413 1.5057392960945908 1.567351519884482 1.5350076175080576 1.3584061107320868 1.0 10.034443706317488 -10.376291403532733 0.32288488659090353 0.7822128130273934 1.7842916889156892 0.4492660086221898 0.21570332733078398 1.1682018474393494 0.18547635341125468 0.42649786631463843 0.08663910671976903 4.2044442331724205e-11 10.376291403532733 1.0020788758882957 QGSITS(ph)PQANEQSVT(ph)PQRR ddPTM_A549_MK2206_60min_R1 4 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.003)IT(0.117)S(0.879)PQANEQS(0.217)VT(0.783)PQRR;QGS(0.121)IT(0.13)S(0.749)PQANEQS(0.194)VT(0.807)PQRR;QGS(0.005)IT(0.095)S(0.666)PQANEQS(0.446)VT(0.787)PQRR;QGS(0.014)IT(0.16)S(0.822)PQANEQS(0.218)VT(0.786)PQRR 97.346 6.371399999999999e-07 196957400.0 3447.63 4011.37 3367.43 3025.19 4404.96 3599.96 3529.22 3257.67 4493.08 5427.85 4810.08 True False 4029.5056575391745 4215.531599053426 3844.9822096654234 3766.361685805938 3756.9962192152266 3980.9053777399545 4170.433591036373 3719.4546986959585 3475.404553974397 4201.694915194459 3615.6043845455265 1.1144763721282174 1.1659272283970608 1.063441073946128 1.0416962934066587 1.0391060026572772 1.1010345586358574 1.1534540694945494 1.0287228089982212 0.9612236805635049 1.1621002931499107 1.0 11.820021112946526 -8.50141609262643 5.799021008198147 0.9821501962728416 1.0942429697242257 0.0 0.06675148609513078 0.08967785200353201 10.091411137131225 0.007067402522337886 0.008360807555310977 3.151983296743559e-09 8.50141609262643 0.11209277345138413 QGSITS(ph)PQANEQSVT(ph)PQRR ddPTM_A549_PD325901_60min_R1 4 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.014)IT(0.217)S(0.769)PQANEQS(0.28)VT(0.72)PQRR;QGS(0.006)IT(0.133)S(0.824)PQANEQS(0.284)VT(0.753)PQRR;QGS(0.007)IT(0.214)S(0.78)PQANEQS(0.125)VT(0.875)PQRR;QGS(0.016)IT(0.217)S(0.767)PQANEQS(0.285)VT(0.715)PQRR 96.052 9.224500000000001e-07 202164900.0 6494.65 7472.97 6819.280000000001 6313.04 8830.060000000001 6298.32 6564.33 7361.48 8492.59 8081.0599999999995 7802.13 True False 7153.9820868913675 8102.743408290494 7282.077348461884 6702.982142845897 8209.867047653286 6247.028570121339 6814.139170289206 7214.64950643066 8135.675976077263 7570.82049247767 6842.517471777044 1.0455190091072482 1.1841757718137271 1.0642394964277209 0.9796076035601399 1.1998313605359539 0.9129722497440619 0.9958526519508516 1.0543852516546035 1.1889887033002164 1.106437875197925 1.0 12.740311498054133 -3.4654408142497606 6.841130438556026 1.0750384004330538 1.3158560100380963 0.0 0.09052524966811372 0.0 0.0 0.012762388130725713 0.0 0.0003424200495286446 3.4654408142497606 0.2408176096050425 QGSITSPQANEQSVT(ph)PQR ddPTM_A549_MK2206_60min_R1 2 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.003)VT(0.997)PQR;QGSITSPQANEQS(0.037)VT(0.963)PQR 192.62 1.9563e-40 16140700.0 2550.98 3059.0 2484.1499999999996 2090.7 3164.5 2892.1 3003.2 2979.8 4287.700000000001 3646.3 4311.0 True False 2981.5230585269555 3214.6900339545937 2836.4398238836015 2602.92159385509 2699.0062419878013 3198.140102379393 3548.842565949542 3402.1957752547737 3316.542796049932 2822.5982975346683 3240.459722452797 0.92009261459672 0.9920475208132822 0.8753201912155287 0.8032568884654626 0.8329084368142821 0.9869402419106844 1.095166386843198 1.0499114528970457 1.0234790986815738 0.871048721259267 1.0 11.661982786739237 -7.422486829635084 5.581191000451596 1.021431729000967 0.8863382988834987 0.4266425076311362 0.06850540253294647 0.12895730749776782 5.879737293054253 0.008459508490826538 0.013567140300661655 3.780186008769561e-08 7.422486829635084 -0.13509343011746822 QGSITSPQANEQSVT(ph)PQR ddPTM_A549_PD325901_60min_R1 1 QGSITSPQANEQSVTPQR 18 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.043)VT(0.957)PQR 191.07 3.724299999999999e-40 10297000.0 2570.8 3042.5 2559.1 2623.9 2924.5 2674.2 3083.5 3572.8 2869.9 2811.4 3004.6 True False 2831.7857234770677 3298.902152654679 2732.775915118429 2785.972343690734 2719.0932089772923 2652.422201828185 3200.8442798559445 3501.537701192621 2749.288083346084 2633.887724203475 2635.053247728671 1.07465977240421 1.2519299773157235 1.0370856518645275 1.0572736418484712 1.031893078942925 1.0065915002341927 1.2147171153429126 1.328829959778168 1.043352002740696 0.9995576850197617 1.0 11.363616400019042 -8.979002934688207 24.973362563522304 1.019125754075601 1.1243942065722836 0.20867309672319068 0.09723527500951146 177.61458533926185 211252.82801157387 0.01790139142614601 0.018311290450318013 1.0495353365304786e-09 8.979002934688207 0.10526845249668271 QGSITSPQANEQSVT(ph)PQRR ddPTM_A549_MK2206_60min_R1 2 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.15)VT(0.85)PQRR;QGSITSPQANEQS(0.033)VT(0.967)PQRR 224.49 6.431799999999999e-75 264720000.0 5214.5 6490.6 5128.5 4920.8 6695.299999999999 5363.2 4650.6 5962.799999999999 7317.7 8667.0 7799.6 True False 6094.580117715074 6820.943816405912 5855.79841667655 6126.396220903108 5710.430239210276 5930.730264195971 5495.553821658544 6808.045160309142 5660.252633965663 6709.1186805070765 5862.744061990915 1.0395439496032564 1.1634387829799966 0.998815291058091 1.0449707775274535 0.9740200457038347 1.0115963107865857 0.9373688777047385 1.1612386773706809 0.9654613222265602 1.1443649269978098 1.0 12.517360361939547 -5.7866762929230475 24.165554483177928 0.998192115868175 1.1014913185881858 0.03128575875282136 0.0758900363855192 114.47136986276924 109612.03283837473 0.007951984381677319 0.02474031608604007 1.634269618287072e-06 5.7866762929230475 0.10329920272001081 QGSITSPQANEQSVT(ph)PQRR ddPTM_A549_PD325901_60min_R1 2 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQSVT(1)PQRR;QGSITSPQANEQSVT(1)PQRR 249.35 3.3947999999999995e-97 188862000.0 22998.2 24409.0 26313.0 22798.0 30334.0 22337.1 25190.0 25675.0 27000.0 27290.0 27642.0 True False 25332.960333619976 26466.032093392965 28098.758412922984 24206.180681985363 28203.444486618948 22155.194063441908 26148.61923449691 25162.89198335215 25865.283895029195 25566.904742659462 24242.209237075138 1.0449938817818916 1.0917335064048863 1.159084064415622 0.9985138089215617 1.163402403254801 0.9139098605567092 1.0786401098504743 1.0379785001141297 1.0669524234396834 1.0546441742429309 1.0 14.565233559801642 -14.99999995585763 0.08615684284927452 0.8020654334732441 1.1210645841131333 0.0527573979855378 0.06636489181297597 209.26422901953302 1.3225224340090669 7.927857468515184 0.6925818315672398 1.0000001016415677e-15 14.99999995585763 0.31899915063988915 QGSLASSKPAS(ph)NPK ddPTM_A549_PD325901_60min_R1 2 QGSLASSKPASNPK 14 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 QGS(0.002)LAS(0.002)S(0.002)KPAS(0.994)NPK;QGS(0.029)LAS(0.022)S(0.019)KPAS(0.931)NPK 51.606 0.00655 9608600.0 5119.9 5437.6 4750.0 4399.4 7003.9 6086.6 5755.299999999999 6118.8 6232.700000000001 5498.6 5956.4 True False 5639.668478928827 5895.845635258857 5072.363564070392 4671.140946237666 6511.970226143291 6037.032747605801 5974.321090921001 5996.75573389426 5970.761293798093 5151.4174576030555 5223.800560730568 1.079610221210302 1.128650599638188 0.9710101879082849 0.8942035385792734 1.2465962569659375 1.1556782609559466 1.1436732741736737 1.1479679716286089 1.1429918168550945 0.9861435936755233 1.0 12.350884102002496 -6.752078767134912 24.999812952961864 1.0981330715852535 1.0228632348625684 0.20282956451803413 0.08931432575911122 351.58239740934266 938979.5642886284 0.013949524518384656 0.028740747278537704 1.7697879462531292e-07 6.752078767134912 -0.07526983672268517 QGSPDQVS(ph)PVS(ph)EMTSTSLYQDKQEGK ddPTM_A549_PD325901_60min_R1 1 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 QGS(0.234)PDQVS(0.832)PVS(0.6)EMT(0.211)S(0.054)T(0.054)S(0.013)LY(0.001)QDKQEGK 110.14 1.0108e-12 11175000.0 948.8 1227.7 1106.4 1390.4 1785.2 989.36 1506.9 1743.6 1525.7 1734.2 1581.7 True False 1045.121477530357 1331.1625876135242 1181.4869573236801 1476.2818501724914 1659.813710605663 981.3029801812629 1564.24590410732 1708.822530172262 1461.5801347646686 1624.7023160395756 1387.1609272224055 0.7534248240563304 0.9596309710647559 0.851730274503508 1.064246996293745 1.196554543912368 0.7074182677176354 1.1276600093108897 1.2318848495782957 1.0536485753612432 1.1712428487247066 1.0 10.437919451875157 -4.5910734623411225 0.705416365410037 1.039226286267053 0.24422801248783427 0.2940199510650966 0.14191309053003504 6.344431757348332 1.1320712623332267 0.021135898548324674 5.0240661606290775 2.5640502822882864e-05 4.5910734623411225 -0.7949982737792187 QGSPDQVS(ph)PVSEMTSTSLYQDK ddPTM_A549_MK2206_60min_R1 1 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.003)PDQVS(0.997)PVS(0.001)EMTSTSLYQDK 103.21 2.1787000000000002e-10 4267400.0 1561.0 1581.0 1666.0 1605.5 2451.4 1407.2 1692.4 1814.0 2492.3 2630.4 2211.4 True False 1824.4586372141594 1661.4661470030103 1902.263851454253 1998.8475720736346 2090.802307349944 1556.1089699762395 1999.8871732195678 2071.1400551420106 1927.798029385276 2036.190813107859 1662.2483484648844 1.0975848698535806 0.9995294316504532 1.1443920838971067 1.2024963501510502 1.2578158427895787 0.9361470994471635 1.2031217688178175 1.2459871336643198 1.1597533131349664 1.224961850609337 1.0 10.69892022894369 -10.692099689619036 1.019960400551681 1.00223419331923 1.1390068016205765 0.0 0.11433334231123317 0.6251821800530517 1.185054423853918 0.05916049048182154 0.016602398603717986 2.0318905494612672e-11 10.692099689619036 0.13677260830134652 QGSPDQVS(ph)PVSEMTSTSLYQDK ddPTM_A549_PD325901_60min_R1 1 QGSPDQVSPVSEMTSTSLYQDK 22 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.007)PDQVS(0.986)PVS(0.006)EMTSTSLYQDK 100.95 2.1028000000000002e-10 9981700.0 3086.2 3434.5 3232.0 2609.5 3466.6 3009.4 3367.9 3228.1 2790.5 4027.1 3145.7 True False 3399.5087520596408 3723.9373683788 3451.3429555948464 2770.682888395509 3223.1179751207655 2984.892444163389 3496.0672774855957 3163.7130131045396 2673.224989225146 3772.8282187308146 2758.798842235267 1.232242344028697 1.3498401229433412 1.251031029431076 1.0043076885412252 1.1683048164937218 1.0819536381075663 1.2672425491714976 1.146771908364728 0.9689814814693825 1.3675619117173288 1.0 11.429824551106929 -6.3580765771675365 0.2504378024494219 0.9571062290593356 1.4340734635369374 0.0 0.1494549746881239 3.3299775749801697 0.25669888159526383 0.07000102539063596 0.476968104118784 4.384533804715072e-07 6.3580765771675365 0.4769672344776018 QGSPDQVS(ph)PVSEMTSTSLYQDKQEGK ddPTM_A549_MK2206_60min_R1 2 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGSPDQVS(0.994)PVS(0.006)EMTSTSLYQDKQEGK;QGSPDQVS(0.871)PVS(0.128)EMTSTSLYQDKQEGK 164.17 1.4595999999999996e-41 59066000.0 3031.1 3425.1000000000004 3378.7 3163.3999999999996 3988.6 2879.5 2869.71 2899.2 4853.8 4087.8 5030.9 True False 3542.675576719948 3599.422960215061 3857.8504651311428 3938.433142010422 3401.882223666471 3184.206778742596 3391.0991608720888 3310.1704784276276 3754.4220499258718 3164.3631408995993 3781.5886842235636 0.9368220270754619 0.9518282554714421 1.0201665985583614 1.041475811063535 0.8995907560911655 0.8420288520607253 0.8967392924088861 0.8753385824950638 0.992816079016994 0.8367814178472207 1.0 11.884776737452308 -8.951651068698771 23.99707469474836 0.9968306550567534 0.9347484828498599 0.0 0.07349460640650649 98.09630068267471 48688.27932841105 0.010650114430193553 0.011335040692898035 1.1177609454465994e-09 8.951651068698771 -0.06208217220689349 QGSPDQVS(ph)PVSEMTSTSLYQDKQEGK ddPTM_A549_PD325901_60min_R1 6 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGSPDQVS(0.962)PVS(0.036)EMT(0.002)STSLYQDKQEGK;QGS(0.001)PDQVS(0.877)PVS(0.121)EMT(0.001)STSLYQDKQEGK;QGSPDQVS(0.442)PVS(0.223)EMT(0.223)S(0.035)T(0.035)S(0.035)LY(0.006)QDKQEGK;QGS(0.285)PDQVS(0.698)PVS(0.007)EMT(0.007)S(0.002)TSLYQDKQEGK;QGSPDQVS(0.999)PVS(0.001)EMTSTSLYQDKQEGK;QGS(0.005)PDQVS(0.822)PVS(0.169)EMT(0.003)STSLYQDKQEGK 201.88 7.608899999999998e-69 156519600.0 9939.6 10801.7 11586.800000000001 9865.599999999999 11140.2 12102.699999999999 13309.3 13619.5 12868.999999999998 12512.5 12213.800000000001 True False 10948.660874853214 11711.997167569447 12373.149925088597 10474.97570559675 10357.750783603631 12004.139623837396 13815.792694628413 13347.848388208935 12328.160683152997 11722.458614603389 10711.580029657342 1.0221331348446694 1.0933958515123103 1.1551190292030529 0.9779113516955014 0.9669675953431653 1.1206693681605628 1.2897996986790354 1.2461138647382095 1.150918972646407 1.0943724998690398 1.0 13.386883682496817 -5.26201238586589 9.091371860471183 1.0941199009133808 1.0218355019742635 0.04075008411670222 0.09889185211445968 0.2698430831165716 475.49500723748974 0.01535340925573215 0.12241461493431635 5.470003624891183e-06 5.26201238586589 -0.07228439893911731 QGSPDQVSPVS(ph)EMTSTSLYQDKQEGK ddPTM_A549_MK2206_60min_R1 2 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGSPDQVS(0.07)PVS(0.787)EMT(0.12)S(0.019)T(0.003)S(0.001)LYQDKQEGK;QGS(0.001)PDQVS(0.124)PVS(0.386)EMT(0.386)S(0.071)T(0.015)S(0.017)LY(0.001)QDKQEGK 109.06 5.4264e-13 18639500.0 3415.2 4180.4 4084.4 3276.7 5236.3 3949.7 3931.3 3395.47 6894.1 6277.1 5564.6 True False 3991.6022663765543 4393.164504067925 4663.629336662513 4079.4916470966514 4466.047206484668 4367.654632401328 4645.566322428551 3876.788270690761 5332.59735761547 4859.098750364714 4182.756244852897 0.9542995175223113 1.0503037344033486 1.114965602502263 0.9753118298769339 1.067728298052361 1.0442049157839304 1.1106471547667083 0.9268501542401267 1.2749003397406946 1.1616978054468492 1.0 12.030238210306347 -8.747559987154963 24.9989821418461 1.1298140683120863 1.036536532329356 0.2723732231199667 0.08220020781402324 352.8193799655605 635483.210004176 0.018261772513442354 0.0206537172302888 1.7882985023715426e-09 8.747559987154963 -0.09327753598273025 QGSPDQVSPVSEMT(ph)STSLYQDKQEGK ddPTM_A549_MK2206_60min_R1 1 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.001)PDQVS(0.204)PVS(0.112)EMT(0.429)S(0.112)T(0.112)S(0.03)LY(0.002)QDKQEGK 82.639 6.998100000000001e-07 15019000.0 907.4 1411.2 1155.8 975.29 1490.2 822.73 802.3 702.07 1918.8 1561.8 1551.4 True False 1060.5469361999542 1483.0240522774502 1319.7098196343482 1214.2360937824315 1270.9935540560036 909.7907425160257 948.0675248605877 801.590572499201 1484.194863693963 1208.9882952827925 1166.144563538221 0.9094472240921219 1.271732595294857 1.1316862942191248 1.0412397671334117 1.089910799909454 0.7801697756542402 0.8129931352456322 0.6873852501332082 1.2727365972454905 1.0367396402505864 1.0 10.187530930980767 -6.265295802970721 20.67126404693938 1.0449073834956628 1.1210330935623791 0.0 0.1847142778067435 117.57137582601312 630256.3056452179 0.030411024857113274 0.07349863103315685 5.428804434201944e-07 6.265295802970721 0.07612571006671631 QGSPS(ph)QSLVACECEASK ddPTM_A549_MK2206_60min_R1 1 QGSPSQSLVACECEASK 17 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 QGS(0.386)PS(0.612)QS(0.003)LVACECEASK 120.24 9.1539e-10 3089900.0 1148.4 1332.0 1246.2 1059.4 1449.3 1513.6 1332.8 1268.9 1502.7 1367.1 1609.7 True False 1342.2218443156576 1399.793110568001 1422.9298989689607 1318.9530475582742 1236.1098898761009 1673.768147353635 1574.9525079573611 1448.7704608432734 1162.340849318803 1058.271160507814 1209.9670645400759 1.1093044460890789 1.1568853000970574 1.1760071333097275 1.0900735120915257 1.0216062288819094 1.3833171136685907 1.3016490730316044 1.197363550878114 0.9606384201545386 0.874628071723652 1.0 10.240752062350891 -8.76062515661864 24.998122407632167 0.9814125785191786 1.181271927306102 0.5191846510243641 0.09879450196926003 14.016583880676711 430333.92560187815 0.016871396471523872 0.018592512087490277 1.735301105201436e-09 8.76062515661864 0.19985934878692346 QGSPVAAGAPAK ddPTM_A549_MK2206_60min_R1 2 QGSPVAAGAPAK 12 0 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 0 ; 103.34 0.00054382 8432800.0 8054.200000000001 8391.4 7141.5 7346.9 9563.5 6638.9 6912.799999999999 6906.0 10573.2 10986.3 11776.1 False True 9413.55205371575 8818.486417432683 8154.272085930697 9146.890829814874 8156.721818691841 7341.4239914548425 8168.766279267443 7884.946648737992 8178.387081930906 8504.487199683277 8851.769366174069 1.063465581207805 0.9962399665688791 0.9212025018513508 1.0333403923478368 0.9214792524827561 0.8293736187376478 0.9228399364406582 0.8907763321160774 0.9239268154888435 0.9607669210386471 1.0 13.111750146712488 -5.403713528214783 2.466708688025502 0.9463113750893747 1.0734673935645145 0.3439723202221461 0.05219266331667932 0.411740697085073 3.7422759875720124 0.008135442162352503 0.09533965761863748 3.947175820686153e-06 5.403713528214783 0.1271560184751398 QGSYS(ph)PALPLQPLGGHK ddPTM_A549_MK2206_60min_R1 1 QGSYSPALPLQPLGGHK 17 0 Q6ZRI6;H3BMJ2;Q6ZRI6-2 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 1 QGS(0.132)YS(0.868)PALPLQPLGGHK 87.156 2.4579e-06 3249300.0 1551.5 1476.7 1583.8 1894.7 1872.3 1414.4 1320.5 1330.6 1529.1 2381.9 1804.7 True False 1813.3552694668606 1551.8577225043307 1808.4066554221145 2358.901585056315 1596.8871502208135 1564.0708691972668 1560.4177571711414 1519.216624791598 1182.7612914709403 1843.8271356986056 1356.5431828138633 1.3367471765295644 1.1439795962007848 1.333099217432176 1.7389063724188052 1.1771738419033644 1.15298273509652 1.1502897784163297 1.1199176288957517 0.8718935795449954 1.3592100561619973 1.0 10.405719258297207 -7.872088172016416 1.0531830468266712 0.9434359020307024 1.3531176804016323 0.1682844813985459 0.1966603036047674 0.26541446174874916 0.5923139686540405 0.028994299407962706 0.04620569146925927 1.3424923758725052e-08 7.872088172016416 0.4096817783709299 QGSYS(ph)PALPLQPLGGHK ddPTM_A549_PD325901_60min_R1 2 QGSYSPALPLQPLGGHK 17 0 Q6ZRI6;H3BMJ2;Q6ZRI6-2 Q6ZRI6 C15orf39 Uncharacterized protein C15orf39 1 QGS(0.098)Y(0.001)S(0.901)PALPLQPLGGHK;QGS(0.161)YS(0.839)PALPLQPLGGHK 95.206 9.479000000000001e-07 13768500.0 3090.3 3210.3 2922.6 2839.5 3819.0 3097.8 3548.9 2775.01 3753.3 3304.8 3456.2 True False 3404.0249810413784 3480.843247548828 3120.9452110214997 3014.8894660276087 3550.766614834765 3072.5725438723152 3683.9553315325934 2719.66024859677 3595.5618534523364 3096.1343639993033 3031.109310656935 1.1230294364750644 1.1483727212709534 1.029637961273358 0.9946488750596029 1.1714412945619581 1.0136792272946413 1.2153818796901674 0.8972491486977537 1.1862197911539742 1.0214525596664394 1.0 11.565630165520405 -11.213250969752178 1.6619768450013814 0.9999315335988026 1.0989843753256274 0.07867199507205425 0.09214744304548407 0.6114923774406242 3.038718568722521 0.0651233986127474 0.013475582320287413 6.1199662938985855e-12 11.213250969752178 0.09905284172682483 QGT(ph)PSSQR ddPTM_A549_PD325901_60min_R1 1 QGTPSSQR 8 0 G3V1T9;J3KPD3;Q9Y580 G3V1T9 RBM7 RNA-binding protein 7 1 QGT(0.969)PS(0.017)S(0.014)QR 47.187 0.040353 2448400.0 697.98 794.11 614.2 506.84 753.88 503.56 546.22 665.72 543.92 577.42 642.08 True False 768.8384157742813 861.0324366292871 655.8833054846394 538.1463556828428 700.9300695448115 499.45917431478586 567.0067010030529 652.4416923527634 521.0609339327515 540.961602656886 563.1082304804719 1.3653475018794703 1.529070949459594 1.1647553169752238 0.9556712662922181 1.244751952829287 0.8869683433478188 1.0069231282932138 1.158643502326485 0.9253299911602365 0.9606707438733594 1.0 9.137268427481546 -5.947283491661427 3.6540425691324607 0.9956993287277699 1.445159923671992 0.702091721367818 0.10627310712524411 0.08133115024059773 2.23398960148092 0.014422618733702037 0.04910736636677898 1.1290586655920174e-06 5.947283491661427 0.4494605949442222 QGTEIDGR ddPTM_A549_MK2206_60min_R1 1 QGTEIDGR 8 0 P19338;H7BY16 P19338 NCL Nucleolin 0 60.102 0.031748 9721500.0 3226.3 3314.0 2470.6 2423.3 4007.0 3034.1 2780.7 3097.6 4076.1 4311.0 4264.1 False True 3770.8205645381436 3482.6684447615303 2820.9682301337784 3017.0086087860695 3417.5756080408046 3355.1664481274215 3285.917196036191 3536.694286002147 3152.8698581941667 3337.1421058804676 3205.2062868269495 1.1764673556381713 1.086566084396789 0.880120646751397 0.9412837548664645 1.0662576140845192 1.0467864305385872 1.0251811902219694 1.1034217362350676 0.9836714320548166 1.0411629727533482 1.0 11.64620149623465 -5.527075001367375 24.99219157099025 1.0007235012265943 1.1539920799395689 0.41543821734944886 0.058830679053522884 63.02534692707887 375372.9700239579 0.007960727814600138 0.03109381423533585 2.971152878150119e-06 5.527075001367375 0.1532685787129746 QGTEIDGR ddPTM_A549_PD325901_60min_R1 2 QGTEIDGR 8 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 66.29899999999999 0.023669 19978200.0 7841.1 8860.2 8448.8 7691.799999999999 10435.1 6796.4 8483.1 7764.7 8624.2 9284.0 9077.9 False True 8637.122699687265 9606.880148874605 9022.186374761672 8166.905016654749 9702.17457514068 6741.052371739242 8805.929012630435 7609.82696721069 8261.754865463367 8697.806655582646 7961.375849549391 1.0848781495696025 1.2066859209288994 1.1332446231981776 1.0258157849835705 1.2186555136308277 0.846719524254188 1.1060813079348395 0.9558431998460921 1.037729535898117 1.0925004446404747 1.0 12.958802057114244 -7.236020647619623 24.99951064703795 1.0097289044822426 1.1318658956063292 0.3767101181905884 0.08150638911128268 583.7510800627397 574123.8736057896 0.010229629565833084 0.017714130116044103 5.807368069523674e-08 7.236020647619623 0.1221369911240866 QGTEIDGRS(ph)ISLYYTGEK ddPTM_A549_PD325901_60min_R1 2 QGTEIDGRSISLYYTGEK 18 1 P19338;H7BY16 P19338 NCL Nucleolin 1 QGT(0.283)EIDGRS(0.701)IS(0.014)LYYTGEK;QGT(0.057)EIDGRS(0.939)IS(0.004)LYYTGEK 72.227 0.00022666 10185600.0 3711.0 3959.9 3779.1000000000004 4258.1 4298.5 5338.1 4537.7 5186.299999999999 4994.7 4231.299999999999 5035.799999999999 True False 4087.7379881061916 4293.614670270261 4035.5724515744055 4521.113166153253 3996.588189019963 5294.628283441411 4710.384656624714 5082.855177926355 4784.790128537127 3964.134995881824 4416.428524566345 0.9255754882861082 0.9721915901926335 0.9137637865362406 1.0237034610669233 0.9049366851040329 1.1988484029550321 1.0665596942016022 1.1508971898114093 1.0834071245400607 0.8975883961058937 1.0 12.108664447781896 -7.221290881598236 24.99992099394901 1.061827159881918 0.9516762112100462 0.3582667266758869 0.07856981368503159 420.32475479878457 261730.72001058777 0.009807560037489121 0.01698710861509038 6.007712183732622e-08 7.221290881598236 -0.1101509486718718 QGVDDAFYT(ph)LVR ddPTM_A549_MK2206_60min_R1 2 QGVDDAFYTLVR 12 0 P01116-2 P01116-2 1 QGVDDAFY(0.006)T(0.994)LVR;QGVDDAFYT(1)LVR 85.45700000000001 0.00041806 2386300.0 1474.56 1393.63 1801.9499999999998 1400.63 2242.4 1576.96 1740.24 1572.12 2399.61 2442.9 2185.45 True False 1723.429678469257 1464.5598143249886 2057.4936057190803 1743.7844128766712 1912.5459304893172 1743.8328604986712 2056.4190819685773 1794.9728244155767 1856.1021663897602 1891.0471933322654 1642.7424496484505 1.0491173944144887 0.8915334321812933 1.2524748515261095 1.0615080977848013 1.164239671835719 1.0615375897005974 1.2518207479259176 1.0926684367349877 1.1298801992892855 1.1511525703478063 1.0 10.68189059590523 -3.545766184686425 12.692688475300061 1.0821812805978872 0.5977800667924935 0.0 0.103000601438193 0.0 0.0 0.013143658578860231 0.0 0.0002845992919750464 3.545766184686425 -0.4844012138053937 QGVDDIEKFEDEGAGFEESSETGDY(ph)EEK ddPTM_A549_PD325901_60min_R1 1 QGVDDIEKFEDEGAGFEESSETGDYEEK 28 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGVDDIEKFEDEGAGFEES(0.195)S(0.195)ET(0.234)GDY(0.377)EEK 91.389 5.410299999999999e-10 3200900.0 997.94 638.39 617.87 863.5 1089.2 966.22 713.22 897.92 820.14 1196.2 700.73 True False 1099.2501341554007 692.1893657299001 659.8023737541415 916.8364338492129 1012.6983495360109 958.3514246692195 740.3619773889593 880.0102811953864 785.6723679136755 1120.6717278552312 614.5446522934541 1.7887229675712688 1.1263451128354618 1.0736443174499812 1.4918955529555402 1.6478840809315718 1.559449620288279 1.2047326010013437 1.4319712618297564 1.2784626226614784 1.8235806359601907 1.0 9.263374029179717 -9.839958192976685 0.5831003597256277 1.0022575404691594 1.4135601254442114 0.0 0.31746644595607193 0.6792142280799526 0.4767905594700876 0.1256300741405268 0.05224196842784087 1.4455789215880618e-10 9.839958192976685 0.411302584975052 QGVLGIK ddPTM_A549_MK2206_60min_R1 2 QGVLGIK 7 0 P23396;P23396-2;E9PL09;H0YEU2;E9PSF4 P23396 RPS3 40S ribosomal protein S3 0 ; 93.262 0.011452 2791200.0 2832.8 3397.6 2649.2 2533.3 3958.8 2870.7 2766.6 3278.5 4140.1 4530.7 4030.6 False True 3310.9073846894776 3570.5233276770614 3024.8963957218516 3153.958613724161 3376.4657641906474 3174.475568583561 3269.255408549549 3743.23741498516 3202.3739603811673 3507.2117232921905 3029.690781099105 1.0928202327923224 1.1785108070935721 0.9984175331003535 1.0410166718664187 1.1144588699463711 1.0477886351926422 1.0790723030036533 1.23551797376074 1.0569969649573996 1.1576137555595198 1.0 11.564954840294421 -9.449469376415705 1.8271771233883376 1.0164828772881747 1.0947174070280201 0.0 0.07581070854415926 0.3393596949152857 2.3024018475836443 0.014018585648396725 0.011743655178283218 3.5524716728786476e-10 9.449469376415705 0.07823452973984546 QGVLGIK ddPTM_A549_PD325901_60min_R1 2 QGVLGIK 7 0 P23396;P23396-2;E9PL09;H0YEU2;E9PSF4 P23396 RPS3 40S ribosomal protein S3 0 ; 94.40700000000001 0.033311 10160600.0 8352.599999999999 9538.8 8813.400000000001 7860.0 10794.5 9269.0 10193.3 9239.400000000001 10358.1 10456.8 10457.2 False True 9200.549803140868 10342.66815242151 9411.530323279576 8345.494348644828 10036.331559003376 9193.516337127152 10581.211609487784 9055.11291883092 9922.785078263036 9796.555863431351 9171.030693652483 1.0032187341286314 1.127754174847539 1.0262238387004363 0.9099843438994234 1.0943515395657537 1.0024518120400832 1.1537647144514875 0.987360441951002 1.0819705450479915 1.0682066379095003 1.0 13.162868166035356 QGVLTHGR ddPTM_A549_MK2206_60min_R1 2 QGVLTHGR 8 0 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 ; 103.83 0.0022670000000000004 15595200.0 1625.42 1467.3600000000001 1267.12 979.8199999999999 1577.4699999999998 1284.71 1383.05 1153.3000000000002 1563.01 2575.7 2331.5 False True 1899.7511582963741 1542.0423563986953 1446.8166695406433 1219.875943985792 1345.4262526618736 1420.6571594785203 1634.3322825108269 1316.7838068331203 1208.9907306140833 1993.8475810986608 1752.5242038735084 1.0840085141748446 0.8798978941291672 0.8255615907288604 0.6960679580285207 0.7677076582954755 0.8106348296579982 0.9325590362167618 0.7513641203486405 0.6898567950969905 1.1377004532615118 1.0 10.77521865390064 -5.271364680056398 2.7724751400754197 0.829036942681715 1.128496037465504 0.2104673882721494 0.128795637159049 0.44714541267453617 4.703668521766659 0.016929933910518884 0.30002880670754023 5.353469342279087e-06 5.271364680056398 0.29945909478378896 QGVLTHGR ddPTM_A549_PD325901_60min_R1 2 QGVLTHGR 8 0 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 ; 123.98 0.0012117 26671000.0 2853.5 2941.3 2703.9 2779.1000000000004 2850.8 2639.8 2261.1 3483.6 2946.8 3508.8 4031.3 False True 3143.1852193643267 3189.1736734932483 2887.4029138715673 2950.7586952059605 2650.569642726095 2618.3023440229 2347.147397821395 3414.116865168667 2822.956243773038 3287.2537691844464 3535.475656516207 0.8890416805928637 0.9020493940087829 0.8166943275510378 0.8346143438344543 0.7497066590858436 0.74057993842982 0.6638844743550663 0.9656739847370002 0.7984657562469903 0.9297910913700494 1.0 11.787688610342627 -10.749421216564139 0.6970555267053089 1.0189618113182124 0.8130287249966027 0.3150930651906241 0.08155825301273897 0.7282059720866503 0.5319772329166024 0.08967018434915897 0.01605996921507802 1.7806508995391672e-11 10.749421216564139 -0.20593308632160967 QGVNSQKPCFFNSYYIGKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 QGVNSQKPCFFNSYYIGKSPK 21 2 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 QGVNSQKPCFFNS(0.168)Y(0.002)Y(0.002)IGKS(0.829)PK 54.744 0.0015667 6268600.0 2570.3 2365.4 3009.3 2964.4 2833.9 3191.5 2721.0 3088.1 2572.4 3100.1 2858.7 True False 2831.2349638451465 2564.740559372023 3213.5291943909565 3147.5042553591265 2634.856640424258 3165.5094821384523 2824.549143988332 3026.5054229324146 2464.2909737619684 2904.359156933625 2507.0980227923696 1.1292877016000187 1.0229917362845877 1.2817724577086036 1.2554372532484717 1.0509587644641005 1.2626189536110572 1.1266209451365568 1.2071747476237633 0.9829256580152684 1.1584545680024076 1.0 11.291802688584973 -8.767683001700206 24.99926718921867 0.9919371020890447 1.1670329294802995 0.18690810574086048 0.09384791549939134 84.29658143340883 337519.79819481575 0.013169888633063606 0.014188593108649363 1.7073281396759242e-09 8.767683001700206 0.17509582739125473 QGYACPYYHNS(ph)KDR ddPTM_A549_PD325901_60min_R1 1 QGYACPYYHNSKDR 14 1 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 QGYACPYYHNS(1)KDR 84.829 9.109e-05 12893000.0 2325.8 2627.2 2211.3 2557.5 2575.7 2558.7 2208.4 2492.5 2901.9 2759.1 2794.6 True False 2561.913503836535 2848.6033641592003 2361.372115627129 2715.470966496076 2394.7917176826163 2537.8627955342813 2292.441870482849 2442.7851321715752 2779.943234629083 2584.8899551290497 2450.881916428991 1.0453027078388664 1.1622768706497706 0.9634785339098341 1.1079566699209233 0.9771142794067778 1.0354896245805363 0.9353538638952488 0.996696379289781 1.1342624122338558 1.0546774766265818 1.0 11.259085261446938 -3.0134397808568516 9.291898959232338 1.048030928095368 10.19337962494353 0.0 0.07013273651536547 0.0 3.260675435173576e-18 0.009789851116549229 0.0 0.0009695276944009013 3.0134397808568516 9.145348696848162 QGYVIYR ddPTM_A549_MK2206_60min_R1 1 QGYVIYR 7 0 E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;P61313;E7ENU7;P61313-2 E7EX53 RPL15 Ribosomal protein L15;60S ribosomal protein L15 0 74.415 0.051508000000000005 3459800.0 1624.6 1979.6 1573.1 1743.0 2049.4 1600.8 1579.4 1841.5 2677.7 2579.7 3088.8 False True 1898.7927623434502 2080.353184444758 1796.1892345274216 2170.0350782462438 1747.9359748237646 1770.1955934749606 1866.3565359152599 2102.5382643572284 2071.2052254082373 1996.9439783205382 2321.7657134567858 0.8178227248934657 0.8960220113455813 0.7736307001679106 0.9346486019966949 0.7528476989270944 0.7624350653535088 0.8038522255273186 0.9055772734393781 0.8920819242887781 0.8600971091727282 1.0 11.18100668361524 -9.5102225414104 0.6230830942826309 0.9901552867537065 0.8234890950475332 0.19842543277417035 0.06755651957491948 0.3615039214290143 0.3091300460492795 0.024767600270521318 0.014228001481768317 3.0887123073249163e-10 9.5102225414104 -0.16666619170617325 QHAADT(ph)SEARPFR ddPTM_A549_MK2206_60min_R1 1 QHAADTSEARPFR 13 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 QHAADT(0.5)S(0.5)EARPFR 63.894 0.0024817 18251000.0 1305.8 1556.1 1455.3 1055.4 1860.9 1582.6 1327.3 1141.1 2061.0 2230.6 2202.6 True False 1526.1871162551242 1635.2988433595106 1661.6834231820972 1313.9730473787065 1587.1640751193236 1750.069681555142 1568.4532291505143 1302.8544194721871 1594.1867907407018 1726.7059107810194 1655.6336313325294 0.9218145170358609 0.987717821389837 1.0036540643624754 0.7936375672202075 0.9586445002581288 1.0570392195685263 0.9473431799571211 0.7869219341863638 0.9628862089843074 1.0429275403105263 1.0 10.693167744494087 -9.224825467364745 3.318491964140189 0.9862943644240326 0.9346352195970393 0.12559652599148363 0.079228097378638 0.4445878205359583 10.028817545270957 0.015130781223966397 0.014241112964991497 5.959015741015586e-10 9.224825467364745 -0.0516591448269933 QHAADT(ph)SEARPFR ddPTM_A549_PD325901_60min_R1 1 QHAADTSEARPFR 13 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 QHAADT(0.582)S(0.418)EARPFR 61.641000000000005 0.0029571 18716000.0 2185.4 2495.0 2331.9 2860.9 3160.2 2595.1 2672.4 2531.0 2525.9 2653.3 3147.6 True False 2407.2601991935508 2705.262406203263 2490.1567568538417 3037.611295424683 2938.2384540981475 2573.9663660026636 2774.099644393392 2480.5172194689117 2419.7452070538607 2485.77018518499 2760.465154280357 0.8720487543415901 0.9800023746028826 0.902078677933182 1.100398347979356 1.0643997623161938 0.9324393615371271 1.0049392002256914 0.8985866804450111 0.8765715456693309 0.9004896081845384 1.0 11.430695674575052 -8.24865693248868 24.71170681402403 0.9368511958119564 0.9826245363884518 0.1314844074601358 0.0692187683585887 1439.9333756455603 2783758.641250292 0.012275604776290432 0.01579461452825012 5.640830728642293e-09 8.24865693248868 0.0457733405764954 QHAADTS(ph)EARPFR ddPTM_A549_PD325901_60min_R1 1 QHAADTSEARPFR 13 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 QHAADT(0.067)S(0.933)EARPFR 73.834 0.00033275 25700000.0 2763.6 3557.4 3234.5 3178.7 3823.3 3143.4 2836.8 3390.1 3620.7 3470.6 3778.9 True False 3044.158637545208 3857.1945826963856 3454.0126206285645 3375.0410796485135 3554.764597668961 3117.801192590947 2944.755976356523 3322.481796018 3468.5345703234175 3251.465723703697 3314.119256420778 0.9185422738326183 1.1638671647749106 1.0422113247544598 1.0183825078441897 1.0726121550339374 0.940763126296833 0.8885485851637203 1.0025233067823436 1.0465931675824505 0.9810949673595192 1.0 11.694409802595999 -7.20864793304458 24.996197397782154 1.004692658692974 1.0484059545121933 0.12229154362236516 0.0685149368419337 693.2524385258655 328247.50978799077 0.010140837857790942 0.01756443040467681 6.185176069893677e-08 7.20864793304458 0.04371329581921923 QHDQVS(ph)KISSER ddPTM_A549_MK2206_60min_R1 1 QHDQVSKISSER 12 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 QHDQVS(0.514)KIS(0.208)S(0.278)ER 64.39399999999999 0.0027313000000000003 21249000.0 1585.7 1724.6 1368.8 871.13 2025.4 1591.2 1391.9 1815.4 2094.8 2664.6 2630.5 True False 1853.3273933571393 1812.3747736378189 1562.9164224913454 1084.5568891065116 1727.466343031157 1759.579727846925 1644.7902129545703 2072.7385094293295 1620.331144708212 2062.6650093549297 1977.274251893317 0.937314280799695 0.9166026270267768 0.7904398800494126 0.5485111071810126 0.8736604653487198 0.8899017049162801 0.8318472823785672 1.0482807366983118 0.8194771884358895 1.04318609691086 1.0 10.949297274295535 -6.9882650134163 24.989799854808865 0.9140873908631806 0.7942386356139242 0.22110074088222298 0.11839641235512999 309.42473287600103 658919.3201208037 0.01749091296515225 0.033037051035478424 1.0273891775518555e-07 6.9882650134163 -0.11984875524925642 QHDQVSKIS(ph)SER ddPTM_A549_MK2206_60min_R1 1 QHDQVSKISSER 12 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 QHDQVS(0.078)KIS(0.758)S(0.164)ER 72.898 0.00070425 22555000.0 972.88 1259.8 1209.8 810.8 1229.1 1027.4 1143.8 1043.3 1584.2 1908.2 1780.2 True False 1137.078359367657 1323.9184389591348 1381.3678316262626 1009.446036398195 1048.3010181789243 1136.118786067076 1351.613654412988 1191.1909699722482 1225.3812294475601 1477.136294697543 1338.127208979464 0.8497535598538953 0.9893815999517971 1.0323142839908146 0.7543722522226112 0.7834090893185122 0.8490364581507525 1.0100785974181106 0.8901926229276227 0.9157434519115034 1.1038833115306694 1.0 10.385999556874806 -10.18474081228522 0.5117613939301422 1.0076154271639786 0.8920664399488254 0.27465736989138734 0.08984456951254173 1.592499951249054 0.7400161455452939 0.0848338959305386 0.02303048717679925 6.535204584529132e-11 10.18474081228522 -0.11554898721515316 QHDQVSKIS(ph)SER ddPTM_A549_PD325901_60min_R1 1 QHDQVSKISSER 12 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 QHDQVS(0.001)KIS(0.976)S(0.024)ER 107.5 2.6753e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QHDQVSKISS(ph)ER ddPTM_A549_MK2206_60min_R1 1 QHDQVSKISSER 12 1 Q9P0K7;Q9P0K7-3;Q9P0K7-2 Q9P0K7 RAI14 Ankycorbin 1 QHDQVS(0.016)KIS(0.409)S(0.575)ER 63.128 0.0019039999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QHDYS(ph)DYEDSSLEFLER ddPTM_A549_MK2206_60min_R1 2 QHDYSDYEDSSLEFLER 17 0 A0A0A0MQS0;F8W9L8;A8MW92 A0A0A0MQS0 PHF20L1 PHD finger protein 20-like protein 1 1 QHDY(0.131)S(0.738)DY(0.131)EDSSLEFLER;QHDYS(0.999)DYEDSSLEFLER 104.06 4.1338999999999995e-09 3339400.0 531.74 557.02 152.81 329.58000000000004 631.48 359.91 354.29999999999995 475.53000000000003 612.76 623.11 779.22 True False 621.4847122051615 585.3699387752164 174.48075578674923 410.32711479540865 538.5901285164975 397.99543731107764 418.67172386651663 542.9378337495477 473.9708383766487 482.34901823131065 585.718168622053 1.0610644256900073 0.9994054651784905 0.29789199846272246 0.7005538444551493 0.9195380259136783 0.6794999005193786 0.7148006435441026 0.9269608880783923 0.809213139984545 0.8235172546654542 1.0 9.194062836440688 -10.301059730053561 0.4740291487336268 1.0263486772025143 0.7657621060257216 0.02958911093897154 0.20169846545238398 2.02477992670588 0.7490526418204456 0.23791691332191503 0.0546344477947892 4.9996576819077224e-11 10.301059730053561 -0.26058657117679274 QHDYS(ph)DYEDSSLEFLER ddPTM_A549_PD325901_60min_R1 2 QHDYSDYEDSSLEFLER 17 0 A0A0A0MQS0;F8W9L8;A8MW92 A0A0A0MQS0 PHF20L1 PHD finger protein 20-like protein 1 1 QHDYS(1)DYEDSSLEFLER;QHDYS(1)DYEDSSLEFLER 147.25 5.977399999999999e-17 11140200.0 1313.92 1167.19 1274.63 1183.1100000000001 1354.87 1293.26 1252.21 1086.42 1597.72 1347.54 1553.6 True False 1447.308191143219 1265.553197553661 1361.1340567728516 1256.1880176622378 1259.7086052477553 1282.7281193389858 1299.8635367856045 1064.7505008199978 1530.5733846209655 1262.4560944273849 1362.517049081829 1.062231252165636 0.9288347609349109 0.9989849724743559 0.9219613204170589 0.9245452055786353 0.9414400503857098 0.9540163461892492 0.7814584790241782 1.1233425560820585 0.9265616861661488 1.0 10.412058567008105 -8.799160483526581 24.999980848863352 1.058245085443788 0.9403396436031664 0.10197446819895062 0.07944051803248527 131.57667605103256 87203.00364813418 0.012677334845600127 0.013496193805751674 1.5879598461663906e-09 8.799160483526581 -0.11790544184062157 QHEAEEGVRR ddPTM_A549_MK2206_60min_R1 2 QHEAEEGVRR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 102.06 0.00012842 10243800.0 666.61 542.45 545.29 324.97 695.48 531.15 434.12 507.96000000000004 875.6 925.72 1165.9 False True 779.1174709502438 570.0583880087179 622.6203214642794 404.5876645884578 593.1758132967851 587.3559404511653 512.9939846597009 579.9648855622576 677.2779980458804 716.5992090595375 876.374852796965 0.8890230800937263 0.6504732377810328 0.7104497801108467 0.4616605135316349 0.6768517049566799 0.6702108562068035 0.5853590880916677 0.661777187822414 0.7728176999651877 0.8176857274857889 1.0 9.77540427717723 -9.738625071590052 0.6987118284998829 0.9817429851320014 0.65375170932201 0.3916871611931233 0.10948887763747171 0.2950018000935807 0.30476815993578515 0.04344000017840709 0.022244509002985486 1.8254709596760335e-10 9.738625071590052 -0.32799127580999143 QHEAEEGVRR ddPTM_A549_PD325901_60min_R1 1 QHEAEEGVRR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 53.683 0.0065044 3025800.0 137.79 195.81 185.48 121.2 130.1 200.3 307.02 223.84 207.52 246.82 269.04 False True 151.77833936436318 212.31159589525478 198.06778818184765 128.68624873482875 120.96222482063452 198.6688232092534 318.7038141077905 219.37533560091705 198.7986560702393 231.23574307743527 235.94978558507682 0.6432654261075232 0.8998168630193615 0.8394489009206156 0.5453967606528217 0.5126608804525442 0.8419962015079646 1.3507272885097619 0.9297543333507989 0.8425464578290881 0.980020992619458 1.0 7.882336050228133 -7.519329638342953 24.998031932644533 0.9593425786976042 0.6980542877423197 0.46909032563911046 0.1626923590758117 130.460336350801 918894.6491900734 0.026366661736903153 0.03957962372072429 3.024616810958233e-08 7.519329638342953 -0.2612882909552845 QHEAPSNRPLNELLT(ph)PQGPSPR ddPTM_A549_MK2206_60min_R1 1 QHEAPSNRPLNELLTPQGPSPR 22 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 QHEAPS(0.004)NRPLNELLT(0.991)PQGPS(0.006)PR 45.611000000000004 0.014406 1786200.0 386.73 352.96 150.46 206.15 448.28 153.36 215.86 216.62 284.65 380.41 395.04 True False 452.0005693592775 370.9241563859472 171.79749045006403 256.6567592544251 382.33860583292534 169.588453407871 255.0789678629023 247.32654837092738 220.1772294926447 294.47511679378096 296.9406654506502 1.5221915417792358 1.24915243866318 0.5785583129523085 0.8643368494675915 1.2875926079463433 0.571118991568555 0.8590233590127618 0.8329157207066056 0.7414856067574781 0.9916968305667146 1.0 8.214030870928802 -5.5647814384261745 5.761189059095318 0.8626858081299027 1.4616629652953412 0.5477211618849478 0.19120973994103738 0.08479833832755715 6.890534387156004 0.025462888968994183 0.10626709184116917 2.724071870383716e-06 5.5647814384261745 0.5989771571654385 QHEAPSNRPLNELLTPQGPS(ph)PR ddPTM_A549_MK2206_60min_R1 4 QHEAPSNRPLNELLTPQGPSPR 22 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 QHEAPSNRPLNELLT(0.383)PQGPS(0.617)PR;QHEAPSNRPLNELLTPQGPS(1)PR;QHEAPSNRPLNELLT(0.461)PQGPS(0.539)PR;QHEAPSNRPLNELLT(0.074)PQGPS(0.926)PR 102.57 2.0974e-10 41675500.0 5391.76 6170.66 4799.17 4696.09 6938.0 5853.3099999999995 5313.01 5181.35 7532.2 8251.5 9385.6 True False 6301.75727212416 6484.720236980137 5479.764470578456 5846.6322608154915 5917.429390713023 6472.703379087276 6278.315144284621 5915.822229718882 5826.168726451778 6387.480419084366 7054.896490617721 0.8932458868113576 0.9191800681419127 0.7767320864120364 0.8287339535868322 0.8387691298635762 0.9174767323227632 0.8899230701164969 0.8385413219862703 0.8258333391850577 0.9053967591982464 1.0 12.78440920043034 -10.812265116074297 0.9607304521762775 1.0035963695080525 0.8568411960711768 0.28863704603111473 0.049383031108937964 0.3273388723934819 0.5147430730083425 0.0342215909479243 0.007711157192058896 1.5407596055308656e-11 10.812265116074297 -0.14675517343687572 QHEAPSNRPLNELLTPQGPS(ph)PR ddPTM_A549_PD325901_60min_R1 4 QHEAPSNRPLNELLTPQGPSPR 22 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 QHEAPSNRPLNELLT(0.001)PQGPS(0.999)PR;QHEAPSNRPLNELLT(0.018)PQGPS(0.982)PR;QHEAPSNRPLNELLT(0.074)PQGPS(0.926)PR;QHEAPSNRPLNELLT(0.013)PQGPS(0.987)PR 97.057 1.6106e-07 32496400.0 8404.16 7861.04 7950.1 7698.73 9192.74 8002.52 8364.55 10136.54 10372.7 10388.23 12838.900000000001 True False 9257.344136384403 8523.51742912228 8489.641593834951 8174.263067015571 8547.073655631357 7937.3501303470475 8682.867527507387 9934.35875773821 9936.771491035899 9732.315384933572 11259.796692492728 0.8221590841472809 0.756986796644844 0.753978231196241 0.7259689753071312 0.7590788616396572 0.7049283701222719 0.7711389259183106 0.8822858022260535 0.8825000808106125 0.8643420170652303 1.0 13.458893157821898 -8.956263608988888 0.6653413144983811 0.9782485089529634 0.7483567643300169 0.6473201291897029 0.04995027985445499 0.16629939184065182 0.16037483861482726 0.01264907882453854 0.011175335621339414 1.1059522869321291e-09 8.956263608988888 -0.2298917446229466 QHEEFDLS(ph)PDQWR ddPTM_A549_MK2206_60min_R1 3 QHEEFDLSPDQWR 13 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 QHEEFDLS(1)PDQWR;QHEEFDLS(1)PDQWR;QHEEFDLS(1)PDQWR 103.21 0.00012512 6201700.0 974.31 1133.05 773.19 928.75 1493.54 1141.811 1416.0 1230.247 2234.9800000000005 2008.39 2138.9 True False 1138.749708407513 1190.717405352158 882.8399683708965 1156.2937916931721 1273.8422444804746 1262.6366821472004 1673.2688709991169 1404.6382797234257 1728.7605985296732 1554.6933041125671 1607.752099363092 0.7082868738648369 0.7406100765309892 0.5491144864439188 0.7191990557196198 0.7923125990537377 0.7853428912625221 1.0407505433592525 0.8736659589994444 1.075265645253717 0.9669981489860633 1.0 10.650829257975648 -7.528567249878005 1.0401146103748125 1.0307197315040315 0.6715788291131752 0.767606351985483 0.07555360728318138 0.14337666685409378 0.31073335544438374 0.012503929151647266 0.024018147231740828 2.960961429260367e-08 7.528567249878005 -0.3591409023908563 QHEEFDLS(ph)PDQWR ddPTM_A549_PD325901_60min_R1 1 QHEEFDLSPDQWR 13 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 QHEEFDLS(1)PDQWR 118.47 4.195e-06 3749900.0 564.34 649.91 793.56 484.74 624.42 769.53 776.53 717.35 768.9 757.29 594.53 True False 621.6313813548501 704.6801965593431 847.415753663937 514.6812888755848 580.562893332057 763.2632028168586 806.0812740835202 703.0418914998113 736.5858069217757 709.4745801600802 521.4065790361868 1.192220056954263 1.3514984752626926 1.6252494458937858 0.987101639237016 1.1134552509966786 1.4638541850157327 1.545974497624389 1.3483563878295801 1.412689897935973 1.3606935713614021 1.0 9.026264976489772 -10.77733423995463 0.9924124388862778 0.9972029679116843 1.3430258174550478 0.0 0.20493268123827252 0.5272893831659868 0.910056591052282 0.1296684025689606 0.03169769687358145 1.669805011115549e-11 10.77733423995463 0.3458228495433635 QHEVEIPS(ph)PTQK ddPTM_A549_MK2206_60min_R1 2 QHEVEIPSPTQK 12 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;Q08499-5;Q08499-4;Q08499-3;Q08499-8;D6RHE0;Q08499-6 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 QHEVEIPS(0.992)PT(0.008)QK;QHEVEIPS(0.93)PT(0.07)QK 73.29899999999999 0.00028923 22937000.0 3304.4 3256.5 2518.8 2694.3 3960.1 3764.8 3232.9 3822.4 4288.6 4528.5 4343.0 True False 3862.1019351764703 3422.2419403638874 2876.003714911748 3354.4036209517217 3377.57453591275 4163.188637128015 3820.2760826645804 4364.236905609051 3317.2389474869356 3505.508704820158 3264.513239297729 1.183055987852969 1.0483161468507598 0.8809900601078406 1.0275356155925195 1.0346334317943655 1.2752861857051656 1.1702437094377993 1.3368721722653811 1.0161511699675474 1.0738227869997161 1.0 11.672652177014639 -4.193408710565012 16.27069677858607 1.057873504590109 1.0503256974969948 0.0 0.13197462131654958 0.0 0.0 0.018381458719354954 0.0 6.406064239721376e-05 4.193408710565012 -0.0075478070931143115 QHEVEIPS(ph)PTQK ddPTM_A549_PD325901_60min_R1 2 QHEVEIPSPTQK 12 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;Q08499-5;Q08499-4;Q08499-3;Q08499-8;D6RHE0;Q08499-6 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 QHEVEIPS(0.988)PT(0.012)QK;QHEVEIPS(0.988)PT(0.012)QK 81.44800000000001 0.00022545 80429000.0 3630.6000000000004 4227.5 4503.1 3783.5 5117.6 3742.4 4269.9 3626.8 4623.7 4954.9 5657.8 True False 3999.1758392935403 4583.76626141254 4808.707445340084 4017.198202048054 4758.157430761564 3711.923135188764 4432.393381078935 3554.4606288304426 4429.38196834987 4642.046768391478 4961.92646774921 0.805972411176745 0.9237876238604946 0.9691210614657438 0.8096045413325732 0.9589334831315873 0.748081044593258 0.8932807468808626 0.7163468971040171 0.8926738429396941 0.9355331640972838 1.0 12.276684640327819 -9.97750372224127 1.0252205166201007 0.9859671776186816 0.8599502939032573 0.21166301102112517 0.0796252686867732 0.4075418394372046 0.8669632216201021 0.026510799560919555 0.014449298811288697 1.0531646606513089e-10 9.97750372224127 -0.1260168837154243 QHEVEIPS(ph)PTQKEK ddPTM_A549_MK2206_60min_R1 1 QHEVEIPSPTQKEK 14 1 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;Q08499-5;Q08499-4;Q08499-3;Q08499-8;D6RHE0;Q08499-6 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 QHEVEIPS(0.99)PT(0.01)QKEK 98.035 1.6962e-05 37557000.0 6503.1 6944.8 7066.2 4513.7 8495.6 7691.0 5832.4 6580.1 9877.5 9024.2 9442.1 True False 7600.6642944698315 7298.260656360855 8068.293413653088 5619.556702627692 7245.908494053271 8504.856515127383 6892.0715841915635 7512.849325711105 7640.262021126287 6985.6269524209065 7097.365981297044 1.0709133944197153 1.0283055256827969 1.1368010942249038 0.7917806010619053 1.0209292451802072 1.1983116747169802 0.971074565177212 1.0585404987581226 1.076492608843884 0.9842562678646428 1.0 12.793067986633083 -5.254996065573612 20.606949190090916 1.0339302237399612 1.0709135594606534 0.011618506054435818 0.09836277897343353 329.6615603272423 1053918.1743201208 0.012489968191473006 0.14786361114787022 5.559092934253112e-06 5.254996065573612 0.03698333572069212 QHEVEIPS(ph)PTQKEK ddPTM_A549_PD325901_60min_R1 2 QHEVEIPSPTQKEK 14 1 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;Q08499-5;Q08499-4;Q08499-3;Q08499-8;D6RHE0;Q08499-6 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 QHEVEIPS(0.954)PT(0.046)QKEK;QHEVEIPS(0.934)PT(0.066)QKEK 75.97 0.00034565 136526000.0 3396.7 3759.2 3726.8999999999996 3903.7 5106.4 4648.6 4115.200000000001 4652.8 4837.8 4995.6 4917.1 True False 3741.5304834816197 4076.0009769135463 3979.8298456703037 4144.822683054049 4747.74408012366 4610.743342838418 4271.806187923848 4559.9962539490125 4634.4840899026785 4680.17696344557 4312.327872065049 0.8676359021119396 0.9451973731676547 0.9228959308616945 0.9611566666588396 1.100970107323983 1.069200552376011 0.990603292387924 1.0574326417729834 1.0747058728823786 1.0853017447405662 1.0 12.074251156959297 -6.565001024836368 5.540736378696768 1.040675432531586 0.9189555683091658 0.7368878944759991 0.0374684310056038 0.08410020525039595 6.273669024661481 0.005700476377153632 0.012168520667910769 2.7226948831286113e-07 6.565001024836368 -0.1217198642224201 QHGEQLGGGGS(ph)GGGGYNNSK ddPTM_A549_MK2206_60min_R1 2 QHGEQLGGGGSGGGGYNNSK 20 0 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2;E9PMX1 Q5T1Z4 PUM1 Pumilio homolog 1 1 QHGEQLGGGGS(1)GGGGYNNSK;QHGEQLGGGGS(1)GGGGYNNSK 135.25 1.4793e-17 7282200.0 1735.96 2075.75 1812.6 1434.2 2623.6000000000004 2063.84 1974.64 1999.4099999999999 2991.0 3578.2 3338.8 True False 2028.9476078528455 2181.396808754903 2069.6539358619307 1785.5790643836854 2237.671915461904 2282.2341789338825 2333.4065278458315 2282.832490436322 2313.543275645531 2769.8821348321726 2509.6838138077937 0.8084475011114823 0.8691918865449426 0.824667204878597 0.7114757064454795 0.8916150724448503 0.909371199024145 0.9297611575641048 0.9096096001721892 0.9218465142568417 1.1036777300761227 1.0 11.293289900238415 -8.032309891574037 0.3018016564935798 1.00134589647664 0.785089737168899 0.6437296948367106 0.057928190453218384 0.7901668846921769 0.19182542064726965 0.035677707404825926 0.061031185895039024 9.28303757656111e-09 8.032309891574037 -0.216256159307741 QHGVTHS(ph)GAR ddPTM_A549_MK2206_60min_R1 2 QHGVTHSGAR 10 0 Q8NAF0 Q8NAF0 ZNF579 Zinc finger protein 579 1 QHGVT(0.099)HS(0.901)GAR;QHGVT(0.038)HS(0.962)GAR 82.069 0.00032995 11906800.0 803.06 1215.7 1305.24 422.76 1071.77 864.89 625.08 883.5500000000001 1076.49 1517.6599999999999 1514.27 True False 938.5968950680355 1277.5739373254657 1490.3426587467877 526.3362189784178 914.1140527651336 956.4120857324821 738.6489448334237 1008.7959182583918 832.6667338012902 1174.819551939354 1138.2349672740888 0.8246073280597255 1.122416701346888 1.3093453474865095 0.4624143820136877 0.803097848025445 0.8402589212515174 0.64894241177846 0.8862809061948912 0.7315420433756387 1.032141504800964 1.0 10.15258269039975 -6.24013847412598 24.999704538892228 0.8262378406863848 1.0891524366008736 0.31745901387698705 0.18322141939936323 807.7107428793723 947964.6472816857 0.02527947239560672 0.06681318018415382 5.752564884480749e-07 6.24013847412598 0.26291459591448874 QHGVTHS(ph)GAR ddPTM_A549_PD325901_60min_R1 2 QHGVTHSGAR 10 0 Q8NAF0 Q8NAF0 ZNF579 Zinc finger protein 579 1 QHGVT(0.097)HS(0.903)GAR;QHGVT(0.141)HS(0.859)GAR 78.486 0.00040815 16481300.0 1146.04 1104.42 1383.49 1207.2800000000002 1790.25 1021.27 1129.89 607.1 1390.1999999999998 1605.12 1534.71 True False 1262.385137129943 1197.493349362327 1477.38195100121 1281.850943668185 1664.509016027217 1012.9531157209897 1172.888582249532 594.9909142392636 1331.7747285507257 1503.772449268507 1345.9503993282524 0.9379135648386331 0.8897009503173234 1.0976496249330983 0.9523760640124193 1.2366793136344054 0.7525931982534738 0.8714203605384764 0.44206005996670933 0.9894679099730558 1.1172569583686158 1.0 10.394409529705658 -7.282667375688842 24.926587680237994 0.9233775910399176 1.0157047950211855 0.1082664253412019 0.1889793790851339 2107.998025393296 2475273.236714425 0.029023387497027972 0.0464239807145288 5.215940448395941e-08 7.282667375688842 0.09232720398126792 QHHDEYEDEIR ddPTM_A549_MK2206_60min_R1 2 QHHDEYEDEIR 11 0 O75976-2;O75976 O75976-2 CPD Carboxypeptidase D 0 ; 73.435 0.0016099 2566800.0 758.14 804.54 749.64 603.55 914.19 846.02 731.07 831.03 1165.76 1075.78 1221.77 False True 886.0954972565936 845.4876495318165 855.9502242522001 751.4197770943889 779.7138620201706 935.5452748573753 863.8959558766417 948.8310474226374 901.7172213361866 832.7605508383413 918.3707898634083 0.9648559242486195 0.9206386558282936 0.9320311944802903 0.8182095787325178 0.8490185779277012 1.01870103577284 0.9406831809242661 1.033167711664435 0.9818661822533592 0.906780311427588 1.0 9.842932945475846 -7.268881153806878 24.979378103934636 0.9921895414728981 0.8958411785900393 0.3968709484459093 0.04991263188845939 329.14086270072426 1104807.4244373913 0.006397396716651256 0.01034549296058289 5.384171020678263e-08 7.268881153806878 -0.09634836288285875 QHHPPYHQQHHQGPPPGGPGGR ddPTM_A549_MK2206_60min_R1 5 QHHPPYHQQHHQGPPPGGPGGR 22 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ;;;; 143.46 3.0566e-27 90802000.0 912.85 630.81 278.59000000000003 280.99 922.89 950.89 713.97 314.028 1096.587 1486.1200000000001 1786.81 False True 1066.9167629602478 662.9155345926439 318.0982511264347 349.8325626141203 787.1341035449902 1051.5125486503025 843.6891072226275 358.54243067041625 848.2117953896039 1150.404459844834 1343.0957635527457 0.7943713262396483 0.4935727984422386 0.23683959086059797 0.2604673263868737 0.5860595535368749 0.7829021408487287 0.6281674993828498 0.26695224599771117 0.631534860288682 0.8565319696949931 1.0 10.391346458137171 -10.164259228413416 0.5186774551553851 1.0409928447056092 0.4882541173666434 0.391403329997133 0.19225772755754258 0.7187164140393348 0.3473595696093613 0.1836494255767175 0.05136873049921132 6.850791837184411e-11 10.164259228413416 -0.5527387273389657 QHHPPYHQQHHQGPPPGGPGGR ddPTM_A549_PD325901_60min_R1 4 QHHPPYHQQHHQGPPPGGPGGR 22 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ;;; 95.666 3.1034e-07 30066000.0 168.14 127.53 328.96000000000004 224.32299999999998 381.33 499.90000000000003 489.89 310.19 325.62 413.88 459.90999999999997 False True 185.2094490218741 138.27740066657395 351.28520379717827 238.17892223550314 354.5466963170836 495.82898014131683 508.533032028094 304.0030171106526 311.9353237740523 387.7475461667972 403.3439856096962 0.4591848536972997 0.34282747629806193 0.870932048896612 0.5905106577341697 0.8790181804276803 1.2292955835000738 1.2607924009562055 0.7537065828590962 0.7733729394837257 0.9613321631179814 1.0 8.655866933382985 -5.969777071974283 1.144253022013656 0.9273163342466121 0.3556854989662055 0.5269835333110562 0.18965519269704414 0.4554945979762333 0.9209856443778508 0.030694164382937504 0.2290977667355687 1.072069468804916e-06 5.969777071974283 -0.5716308352804066 QHNEEQS(ph)GDELLDVVTVPSGELR ddPTM_A549_PD325901_60min_R1 2 QHNEEQSGDELLDVVTVPSGELR 23 0 Q9NVI1-1;Q9NVI1;H3BP78;F8W7R3;Q9NVI1-2;H3BN35 Q9NVI1-1 FANCI Fanconi anemia group I protein 1 QHNEEQS(1)GDELLDVVTVPSGELR;QHNEEQS(1)GDELLDVVTVPSGELR 135.35 8.8264e-23 5325600.0 1471.52 1379.3400000000001 1292.3 1455.7199999999998 1845.6100000000001 1235.08 1399.3400000000001 1718.81 1717.8999999999999 1689.64 2216.08 True False 1620.9076271242307 1495.5818225941505 1380.0032492311939 1545.6365182200063 1715.9807206088485 1225.0219179694684 1452.5926494482303 1684.52698616964 1645.702637158172 1582.955842044233 1943.5162088885552 0.8340077740083188 0.7695237198198792 0.710054921548805 0.7952784294523144 0.8829258602325586 0.6303121694416048 0.7474044429394953 0.8667419280917528 0.8467655837556946 0.814480391161483 1.0 10.924453424438823 -9.757662297193447 0.5326728390530676 1.0007836730635231 0.7666564514915277 0.17316410089538214 0.0843351906094574 0.42660311718365795 0.254929846626728 0.043242616796140734 0.018336698690858393 1.747180213743559e-10 9.757662297193447 -0.2341272215719954 QHPVPPPAQNQNQVRS(ph)PGAPGPLTLK ddPTM_A549_MK2206_60min_R1 2 QHPVPPPAQNQNQVRSPGAPGPLTLK 26 1 Q15942;Q15942-2;H0Y2Y8 Q15942 ZYX Zyxin 1 QHPVPPPAQNQNQVRS(1)PGAPGPLTLK;QHPVPPPAQNQNQVRS(0.999)PGAPGPLT(0.001)LK 63.706 0.00017475 10883100.0 2747.7 3219.8 3335.4 3460.3 4015.0 2978.3999999999996 2695.8999999999996 2607.0 4272.9 4755.4 5593.4 True False 3211.4445851847186 3383.674067122262 3808.4098740339223 4308.0736553387715 3424.398818638341 3293.5723110980903 3185.710133705171 2976.5502336026575 3305.0949724191873 3681.151837231265 4204.4044100133315 0.7638286596637205 0.8047927214288915 0.9058143562412081 1.0246572963054026 0.8144789332069706 0.783362395694863 0.7577078280381381 0.70796002080904 0.7861030124855919 0.8755465645655129 1.0 12.03768572947599 -10.726481855124186 1.0378312982293734 0.9975494405465961 0.8184724772836028 0.1768051321957308 0.08791633080045892 0.45046004945305324 0.8800282463276468 0.056977862148082585 0.015567684070414534 1.877232847751321e-11 10.726481855124186 -0.17907696326299327 QHPVPPPAQNQNQVRS(ph)PGAPGPLTLK ddPTM_A549_PD325901_60min_R1 2 QHPVPPPAQNQNQVRSPGAPGPLTLK 26 1 Q15942;Q15942-2;H0Y2Y8 Q15942 ZYX Zyxin 1 QHPVPPPAQNQNQVRS(1)PGAPGPLTLK;QHPVPPPAQNQNQVRS(0.999)PGAPGPLT(0.001)LK 76.891 2.4705000000000003e-06 20779700.0 4557.2 3932.6000000000004 4196.1 4477.1 5291.4 5011.6 4800.9 5256.9 5586.9 5279.3 5697.4 True False 5019.843589166677 4264.0140034608985 4480.872579199114 4753.640298768167 4919.750318339008 4970.787191190688 4983.600876653281 5152.047005541731 5352.102021968098 4945.9640970290275 4996.655918794294 1.004640637808412 0.8533735507827035 0.8967742930516536 0.9513643476806048 0.984608585881206 0.9948227918784033 0.9973872441182297 1.0310990168770582 1.0711367980806599 0.9898548504061295 1.0 12.286747158861461 -7.048246317828349 1.0496122839350468 1.0324924982702581 0.9125700747060222 0.49640552967131935 0.040790152295559844 0.2685078358103278 0.5791620390871394 0.006869014973127972 0.017600905358127097 8.948570875043257e-08 7.048246317828349 -0.11992242356423588 QHRDS(ph)PEILSR ddPTM_A549_MK2206_60min_R1 2 QHRDSPEILSR 11 1 Q96Q42 Q96Q42 ALS2 Alsin 1 QHRDS(1)PEILSR;QHRDS(1)PEILSR 67.275 0.0019851 3566700.0 558.65 561.73 493.47 407.61 514.42 565.0 678.84 483.02 540.71 698.24 742.1800000000001 True False 652.9364623188277 590.3196576571796 563.4514662527791 507.4744682983085 438.74949944805326 624.7879249833534 802.1764409527126 551.4895641867109 418.240048336441 540.5070990512594 557.8762228740472 1.1703966499146574 1.0581552564043533 1.0099936924180235 0.9096542342025608 0.7864638811593706 1.119940050078838 1.4379111495738033 0.9885518356483562 0.7497004374586294 0.9688656316390288 1.0 9.123801253667073 -8.529088504667225 24.828438406227566 0.8811357676214442 1.0638648112622517 0.15709424942178218 0.16436419750044426 195.0674135843986 779932.9252403573 0.03084999355923341 0.035028080778064984 2.9574097160081157e-09 8.529088504667225 0.18272904364080755 QHREPS(ph)EQEHR ddPTM_A549_MK2206_60min_R1 1 QHREPSEQEHR 11 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 QHREPS(1)EQEHR 58.751999999999995 0.004541600000000001 4635000.0 216.24 111.96 201.18 0.0 214.19 165.93 0.0 167.8 137.74 85.469 188.11 True False 252.7360254395836 117.65828578017529 229.7103491209883 0.0 182.68293473577728 183.4886024645803 0.0 191.58616386594784 106.5421099255819 66.16149353920154 141.3970954281132 1.7874202060117672 0.832112466129074 1.624576151479532 0.0 1.2919850594007 1.2976829680201358 0.0 1.354951198154922 0.753495746167914 0.4679126776889012 1.0 7.143608674458838 -2.7583921531641535 1.050795338719966 0.8785221702608302 199.97701561597984 0.2102843293024409 0.511930087922708 407.9740490096992 2.534294955095107 0.06492158336343219 193211.8285622341 0.0017442464463339046 2.7583921531641535 199.09849344571901 QHREPS(ph)EQEHR ddPTM_A549_PD325901_60min_R1 1 QHREPSEQEHR 11 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 QHREPS(1)EQEHR 78.486 0.00044196 4914300.0 383.37 187.2 190.25 133.64 232.26 199.23 177.07 191.33 173.45 179.68 380.43 True False 422.28944017792236 202.97600097845714 203.16150906618788 141.89463928153884 215.94685885350162 197.60753693449593 183.8084957464219 187.51377305451868 166.1604996886228 168.33497413561932 333.6395217444647 1.26570568729371 0.6083691761610813 0.6089251896895769 0.4252932582435971 0.6472460388517637 0.5922785643058319 0.5509194318028104 0.562025062480865 0.498024031505133 0.5045414681554048 1.0 8.382146385174655 -10.871534420994697 1.1090285034382528 1.0008890188714659 0.61678095392446 0.0 0.25382640865232653 0.4800172456601747 1.0442600578045362 0.14233707501856876 0.03409110915593272 1.3442052244138036e-11 10.871534420994697 -0.3841080649470059 QHS(ph)EHVGLDNDLR ddPTM_A549_MK2206_60min_R1 2 QHSEHVGLDNDLR 13 0 G3V1S3;Q6ZUT9;Q6ZUT9-2;Q6ZUT9-4 G3V1S3 DENND5B DENN domain-containing protein 5B 1 QHS(1)EHVGLDNDLR;QHS(1)EHVGLDNDLR 72.184 0.00056848 4156000.0 772.03 1295.41 900.3499999999999 797.79 1209.27 1175.23 1119.38 921.54 1385.2600000000002 1690.6 1608.09 True False 902.3297896786983 1361.3408358565284 1028.0331684614855 993.2485858141537 1031.3879849102823 1299.5920585454635 1322.756856510588 1052.171117097887 1071.5008218056607 1308.6922858273065 1208.7568719738151 0.7464940308510983 1.1262321376784021 0.8504879618866443 0.8217108078916221 0.8532633888782764 1.0751476071638135 1.0943117571283123 0.8704571957301599 0.8864485875112131 1.082676190862356 1.0 10.239308376336789 QHS(ph)ITK ddPTM_A549_MK2206_60min_R1 4 QHSITK 6 0 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 1 QHS(0.999)IT(0.001)K;QHS(0.965)IT(0.035)K;QHS(0.989)IT(0.011)K;QHS(1)ITK 97.431 0.010631 65814000.0 8722.800000000001 12121.900000000001 7340.4 3802.1800000000003 14919.1 12961.0 7156.8 12401.6 13514.7 11986.199999999999 12353.099999999999 True False 10194.995388015164 12738.852933178878 8381.379096767581 4733.714270686349 12724.520153212272 14332.524417184508 8457.097920880282 14159.564778307142 10453.642028541173 9278.50909522256 9285.48434178419 1.0979497689892408 1.3719104426093007 0.9026324086350367 0.5097972379733477 1.37036687423537 1.5435408525421668 0.9107869454718466 1.5249139686327235 1.1258047123616737 0.9992488009989698 1.0 13.180761449455613 -4.947139708219475 16.19594265843531 1.104518339119604 1.0512083152752967 0.0 0.29635498897751644 104222.63876390472 56255.013995155976 0.03837660366179109 182191.6448007757 1.1294325290051416e-05 4.947139708219475 -0.053310023844307386 QHS(ph)ITK ddPTM_A549_PD325901_60min_R1 3 QHSITK 6 0 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 1 QHS(0.898)IT(0.102)K;QHS(0.952)IT(0.048)K;QHS(0.996)IT(0.004)K 80.165 0.013224000000000001 43434000.0 10038.599999999999 11091.8 7966.1 4736.06 9391.8 5347.400000000001 6193.8 6478.9 6993.400000000001 11075.6 13997.2 True False 11057.711281973272 12026.544912675487 8506.727450050768 5028.595669827337 8732.152367951074 5303.852547324819 6429.508448377407 6349.6732569012765 6699.491718203604 10376.284725826285 12275.633135561391 0.9007854144761047 0.9797087270257109 0.692976676323729 0.40964043274150586 0.711340284571948 0.4320634617175094 0.5237618603762039 0.517258310571929 0.5457552897044298 0.8452749126044776 1.0 13.58350981533004 -10.777688616276324 1.0358079498947401 0.9991007624295017 0.6262833156386605 0.2687051259810046 0.17720937460290098 0.4693766674313449 0.8974866094814486 0.12636924241652286 0.03222161556636877 1.6684430366400262e-11 10.777688616276324 -0.3728174467908413 QHS(ph)LKK ddPTM_A549_MK2206_60min_R1 2 QHSLKK 6 1 Q9H093 Q9H093 NUAK2 NUAK family SNF1-like kinase 2 1 QHS(1)LKK;QHS(1)LKK 50.607 0.040202 11126900.0 4096.5 3662.1 2508.5 1312.8 6465.3 6257.6 5326.2 6626.1 6135.700000000001 5030.9 5895.4 True False 4787.889050190777 3848.485247906218 2864.2430200318067 1634.436058933831 5514.26293453112 6919.775078541295 6293.901596550497 7565.369966580197 4745.973746699527 3894.416195888205 4431.409475237352 1.0804438355212778 0.8684562483813545 0.6463503397817676 0.3688298425291173 1.2443587001708454 1.5615291516635716 1.4202933923666323 1.707215279665616 1.070985151162391 0.8788211104503303 1.0 12.113549926900081 -6.791754514050165 24.995148077142595 1.1685954492043178 0.7433602025620311 0.41134407573603027 0.2883306604026767 196.18765555331 161758.29446963558 0.04622997902526052 0.08737390456618693 1.6152713346459727e-07 6.791754514050165 -0.42523524664228673 QHSLLK ddPTM_A549_MK2206_60min_R1 1 QHSLLK 6 0 S4R456;K7EM56;A0A0B4J2B4;K7EJ78;S4R417;K7EQJ5;K7ELC2;P62841 S4R456 RPS15 40S ribosomal protein S15 0 72.021 0.052397000000000006 1540700.0 736.61 655.59 683.97 440.39 611.44 674.36 585.83 583.84 698.82 798.48 902.21 False True 860.9317596145561 688.9567307487059 780.9672307798107 548.2855697698581 521.4979859696701 745.7203275960605 692.2677278936532 666.6011079350119 540.5383857862291 618.1028134315559 678.1663572707348 1.2694993645502506 1.015911101107104 1.1515865132602503 0.808482408322968 0.7689823896137034 1.0996126829369643 1.020793379783198 0.98294629450174 0.7970586862515765 0.9114324336569816 1.0 9.405495406160254 -5.292545439674159 1.044638693076764 0.9185175401682635 1.4037527324294319 0.41248793362898284 0.11388699957427968 1.351554461118429 1.1824560561129807 0.018592094048556575 0.718319017973875 5.098642483421717e-06 5.292545439674159 0.4852351922611684 QHYIDLK ddPTM_A549_MK2206_60min_R1 1 QHYIDLK 7 0 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 77.282 0.043552999999999994 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QHYIDLK ddPTM_A549_PD325901_60min_R1 2 QHYIDLK 7 0 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 ; 75.109 0.01965 4965500.0 1576.1 1795.0 1713.7 1478.3 1974.8 1841.2 1660.6 1804.8 2152.6 1845.1 1833.1 False True 1736.1045117365034 1946.2709495530469 1830.0019873152498 1569.6112335371065 1836.0968606901542 1826.2058776479148 1723.7950417151865 1768.8018481617908 2062.1337078681436 1728.6000711132638 1607.6403209783093 1.0799085399152086 1.2106383027073295 1.1383155569285703 0.9763447787761005 1.1421067490847832 1.135954264033761 1.0722516841741023 1.10024725374231 1.282708377588625 1.0752405550896769 1.0 10.650728951636397 QHYLS(ph)S(ph)EDEPDDNPDVLDSR ddPTM_A549_PD325901_60min_R1 1 QHYLSSEDEPDDNPDVLDSR 20 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 QHY(0.032)LS(0.984)S(0.984)EDEPDDNPDVLDSR 81.96700000000001 5.4441e-05 2108900.0 162.76 324.28 358.11 276.23 306.33 446.26 288.04 276.98 166.03 304.95 262.35 True False 179.28327538242075 351.6082136607588 382.41349809036797 293.2920997361528 284.8144375811297 442.62580651703144 299.00151982153585 271.45541661339354 159.05233648487769 285.6954049569074 230.08261317367283 0.7792126180655498 1.528182459381905 1.6620703877424736 1.2747251767119303 1.2378790107279587 1.92376903413786 1.2995398291823168 1.1798171659693875 0.6912835971869831 1.2417079283659582 1.0 7.846008156231722 -8.49917535265823 3.1161959423711565 0.8550909060973936 1.4111596101703385 0.23033793196875585 0.30220321076658574 0.17281219208320261 3.421955874740739 0.047800294270332694 0.05651855285132385 3.168287962810795e-09 8.49917535265823 0.556068704072945 QHYLSS(ph)EDEPDDNPDVLDSR ddPTM_A549_MK2206_60min_R1 1 QHYLSSEDEPDDNPDVLDSR 20 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 QHYLS(0.161)S(0.839)EDEPDDNPDVLDSR 95.666 5.5716e-07 6515600.0 198.06 264.83 250.21 364.16 499.92 250.97 501.53 383.17 753.44 317.33 549.16 True False 231.4876858979094 278.30871581961253 285.6935403795729 453.37921634776393 426.3824302400198 277.5274788195967 592.6515090905281 437.48552090891064 582.7870429964456 245.64493260474336 412.78841595504014 0.5607901698557414 0.6742163904374807 0.692106486851341 1.098333186746076 1.0329321603018538 0.6723238058352498 1.4357270848295272 1.0598299370798245 1.4118299362836804 0.595086788073768 1.0 8.689258674880097 -6.1500096498283225 0.6207451949913105 1.1902801666285325 0.4457806675496354 0.22248966114333446 0.2639283296474043 0.9273259382877157 0.4374630334981158 0.03924667296161561 0.3984683985806611 7.079300543215441e-07 6.1500096498283225 -0.7444994990788971 QHYLSS(ph)EDEPDDNPDVLDSR ddPTM_A549_PD325901_60min_R1 1 QHYLSSEDEPDDNPDVLDSR 20 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 QHY(0.001)LS(0.114)S(0.885)EDEPDDNPDVLDSR 87.102 1.6016999999999998e-06 6610900.0 398.15 197.53 221.33 309.63 327.42 462.3 286.98 297.32 366.2 231.12 275.39 True False 438.5698948974614 214.1765463315953 236.3507847654106 328.75514187924927 304.42314873767987 458.5351820750763 297.90118094148164 291.38971935697214 350.8098874948036 216.52704375681412 241.5187758410433 1.815883230486843 0.8867904600202039 0.9786021146487012 1.3611991065059927 1.2604533443728507 1.898548800101833 1.2334493660134593 1.2064888882541853 1.452516005321635 0.8965226119700209 1.0 7.9159915393319285 -10.912776918933856 1.099609496228526 0.9950669381985955 1.3369400462619327 0.20777056816158945 0.29204717363934835 0.8004479601886424 1.6774462531539125 0.2147285920656138 0.047960671679351814 1.2224274148250369e-11 10.912776918933856 0.34187310806333726 QHYQKET(ph)ESAPGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 QHYQKETESAPGSPR 15 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 2 QHYQKET(0.618)ES(0.383)APGS(1)PR 85.855 0.00043175 136270000.0 3513.3 3572.3 3990.9 3693.0 4305.9 4724.0 4237.3 4546.8 4589.0 4485.2 5387.3 True False 3869.96762964524 3873.3502579879423 4261.74647323127 3921.1082225884693 4003.468438548577 4685.529310237208 4398.552770239529 4456.110507104401 4396.140288677373 4202.003706550979 4724.696252908429 0.8190934236805095 0.8198093698835316 0.9020149116692577 0.8299175254228698 0.8473493795678656 0.991710167051033 0.9309704867338017 0.9431528014867215 0.9304598758007345 0.8893701270138389 1.0 12.206005867221485 -2.000000001239143 0.13269383107754767 1.0217001765432874 0.2977607777719566 0.4430415871238288 0.04662556249257034 28.83748364247298 0.24743387352621593 0.09473479216768922 3.94898390016603 0.009999999971467678 2.000000001239143 -0.7239393987713307 QHYQKETES(ph)APGS(ph)PR ddPTM_A549_MK2206_60min_R1 3 QHYQKETESAPGSPR 15 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 2 QHYQKET(0.096)ES(0.904)APGS(1)PR;QHYQKET(0.148)ES(0.854)APGS(0.998)PR;QHYQKET(0.023)ES(0.977)APGS(1)PR 101.49 2.0506e-05 156162000.0 6478.0 7703.5 8015.6 4761.9 7144.6 5553.6 5828.0 5157.3 8323.5 13169.599999999999 13247.2 True False 7571.328028105908 8095.575245691145 9152.33260967389 5928.565713769812 6093.638804394393 6141.278265818676 6886.872161146086 5888.36306856885 6438.24053989822 10194.578213315568 9957.554635879545 0.7603601792778049 0.8130083681911997 0.9191345610794601 0.5953836991672348 0.6119613727689224 0.6167456258477482 0.6916228344187009 0.5913462977498124 0.6465684372646713 1.0238033921081355 1.0 13.281575775163798 -10.714632650881507 0.9589167773272637 1.0009850471691157 0.6925798170489635 0.6017730967091341 0.09888713449125508 0.35214548036898313 0.5727718027369813 0.07430993502868413 0.019083819724072432 1.9291560048926875e-11 10.714632650881507 -0.3084052301201522 QHYQKETES(ph)APGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QHYQKETESAPGSPR 15 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 2 QHY(0.003)QKET(0.037)ES(0.963)APGS(0.997)PR;QHYQKET(0.013)ES(0.987)APGS(1)PR 84.493 0.00031177 369720000.0 5806.8 6714.0 6926.1 7665.5 7914.4 7711.1 7370.799999999999 7672.099999999999 8126.200000000001 8952.5 9253.5 True False 6396.302061259777 7279.812342785045 7396.146796022727 8138.980525386379 7358.519847197766 7648.303358207055 7651.299827456518 7519.073946853983 7784.684073621716 8387.23762215679 8115.378162769509 0.7881705489220149 0.8970392009804614 0.9113742634882548 1.0029083503126384 0.9067377637379929 0.9424457129175781 0.9428149463888179 0.9265216969615588 0.9592509329183327 1.033499296512697 1.0 12.986442608127955 -3.789416077959847 0.5599734616118268 0.9715166566103678 4.004356527255059e-42 0.6728242003404872 0.0360160054209227 6.468207910425445 0.3856675946017508 0.005932991185604389 5.950946677653003 0.00016239921365694468 3.789416077959847 -0.9715166566103678 QHYQKETES(ph)APGSPR ddPTM_A549_MK2206_60min_R1 2 QHYQKETESAPGSPR 15 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 QHYQKET(0.022)ES(0.974)APGS(0.004)PR;QHYQKETES(0.995)APGS(0.004)PR 85.80799999999999 2.664e-05 13807100.0 1776.62 2402.3999999999996 2327.83 1135.3899999999999 1004.69 1164.02 999.22 817.35 1376.66 3134.7 2807.0 True False 2076.4700218112866 2524.6718985199454 2657.951297317378 1413.560600969594 856.9014319047951 1287.1958237860583 1180.7653398868213 933.2118655293943 1064.8487080742823 2426.569092856299 2109.9444307411295 0.9841349333934426 1.1965584788567822 1.259725734285693 0.669951578048467 0.40612511847233995 0.6100614807821853 0.5596191646962337 0.4422921532590309 0.5046809255067672 1.1500630336524802 1.0 11.04298928807327 -6.268836651601552 24.4045898687667 0.6815446869839185 1.1517815982319881 0.4769431664526905 0.22303162388606293 281.22838176237434 927811.9563338085 0.033585589100002824 0.07955666132332548 5.38472276556792e-07 6.268836651601552 0.47023691124806966 QHYQKETES(ph)APGSPR ddPTM_A549_PD325901_60min_R1 4 QHYQKETESAPGSPR 15 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 QHYQKETES(0.999)APGSPR;QHYQKET(0.003)ES(0.993)APGS(0.004)PR;QHYQKET(0.001)ES(0.999)APGSPR;QHYQKET(0.019)ES(0.971)APGS(0.011)PR 128.14 1.3874e-09 53569700.0 3667.25 4361.2699999999995 5109.7 3942.3300000000004 5446.299999999999 5563.6 5723.1 5244.2 5497.099999999999 6063.6 6730.799999999999 True False 4039.5465203132376 4728.809528778398 5456.474969122205 4185.838770418953 5063.770676715002 5518.2918862057 5940.895702300484 5139.600317004687 5266.0760036801885 5680.743261179549 5902.954270056623 0.6843262433531421 0.8010920146825122 0.9243634152479832 0.7091091306012779 0.8578366772044177 0.9348356151423765 1.006427532809516 0.8706827262877282 0.8921085549303561 0.9623559664007117 1.0 12.527221449991853 -7.1037806745265675 3.43370599548399 0.9452060795174968 0.7906956428556422 0.5530815089465723 0.06878726300947956 0.16064277298904656 3.543051592872039 0.010767069685783746 0.01960311686007411 7.874433604510262e-08 7.1037806745265675 -0.1545104366618546 QHYQKETESAPGS(ph)PR ddPTM_A549_MK2206_60min_R1 4 QHYQKETESAPGSPR 15 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 QHYQKETES(0.001)APGS(0.999)PR;QHYQKETES(0.002)APGS(0.998)PR;QHYQKETES(0.002)APGS(0.998)PR;QHYQKET(0.009)ES(0.044)APGS(0.947)PR 117.84 3.4268e-07 19695000.0 2581.8700000000003 3332.15 2905.42 2302.89 2464.64 2162.83 2201.04 1447.65 3641.58 5417.299999999999 5195.5 True False 3017.626535338964 3501.7422022366127 3317.4522444731156 2867.098153380662 2102.0947208888665 2391.699235029639 2600.940477276763 1652.8588207421883 2816.7679444083096 4193.52816752175 3905.3139614946663 0.7726975513600036 0.8966608669015702 0.8494713298808476 0.7341530493193301 0.5382652308149739 0.6124217562559997 0.6660003530884658 0.42323327574656655 0.7212654276150076 1.0738005212561135 1.0 11.931222820861294 -10.289215004580784 0.9570129656846303 0.9806517814873525 0.6919506214785088 0.49177354928552397 0.13211899486139744 0.39463562821698783 0.7064891945337408 0.0654502428013335 0.02664116771531582 5.1378922885514125e-11 10.289215004580784 -0.2887011600088437 QHYQKETESAPGS(ph)PR ddPTM_A549_PD325901_60min_R1 4 QHYQKETESAPGSPR 15 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 QHYQKET(0.001)ES(0.075)APGS(0.925)PR;QHYQKETES(0.001)APGS(0.999)PR;QHYQKETES(0.005)APGS(0.995)PR;QHYQKET(0.001)ES(0.089)APGS(0.911)PR 130.11 1.1674000000000001e-09 29354600.0 2479.63 2765.98 2729.7999999999997 2829.9800000000005 2959.8 3678.21 3353.15 3735.5 3237.8599999999997 3533.19 3759.05 True False 2731.3602121928734 2999.078841807653 2915.060643620917 3004.781437249096 2751.9138587556795 3648.255877266638 3480.755958164085 3660.992522056938 3101.784004161455 3310.103780422021 3296.710680581262 0.8285107420197674 0.909718544448938 0.8842330814140311 0.9114483278585144 0.8347453341797266 1.106635137489042 1.0558269424935927 1.1104985777555243 0.9408723739186484 1.004062564519128 1.0 11.686811566269837 -7.240502998891387 24.991119513276487 0.9983523005824866 0.87840933333996 0.6284383488585669 0.058345945839802855 601.3438400216053 717806.1781892255 0.00976117654293496 0.016895470868195556 5.747738499019338e-08 7.240502998891387 -0.11994296724252662 QIANS(ph)QDGYVWQVTDMNR ddPTM_A549_MK2206_60min_R1 2 QIANSQDGYVWQVTDMNR 18 0 D6RDN1;D6RE09;P10155-2;P10155-3;P10155-5;P10155-4;P10155 D6RDN1 TROVE2 60 kDa SS-A/Ro ribonucleoprotein 1 QIANS(0.996)QDGY(0.004)VWQVTDMNR;QIANS(0.981)QDGY(0.019)VWQVTDMNR 107.34 4.1977e-09 1779900.0 502.87 776.64 885.12 557.88 1479.1 1155.6 610.25 677.97 1356.2 1107.0 1498.9 True False 587.7421620088944 816.1676587023516 1010.6433254496924 694.5606250441853 1261.5263493519226 1277.8848249748023 721.124525796053 774.0743236960468 1049.022865406375 856.9279311551098 1126.6817624645096 0.521657651334716 0.7243994585632256 0.8970086843679851 0.6164656677542198 1.119682940986329 1.1342021035110663 0.6400427785559087 0.687039010911859 0.9310729083887335 0.7605767304519612 1.0 10.137864360466248 -4.756953500170386 0.6239282809001478 0.9376713840983768 2.9740382706788222e-21 0.19867580459568612 0.17747128610676158 4.952538545249146 0.8479602037442814 0.029364207646294386 3.8370883106726192 1.7500340544154347e-05 4.756953500170386 -0.9376713840983768 QIANS(ph)QDGYVWQVTDMNR ddPTM_A549_PD325901_60min_R1 1 QIANSQDGYVWQVTDMNR 18 0 D6RDN1;D6RE09;P10155-2;P10155-3;P10155-5;P10155-4;P10155 D6RDN1 TROVE2 60 kDa SS-A/Ro ribonucleoprotein 1 QIANS(1)QDGYVWQVTDMNR 118.24 4.1366e-10 2364100.0 1205.0 1000.3 940.36 944.65 1268.5 1194.6 850.91 828.53 1415.9 1077.8 1268.0 True False 1327.3307129258856 1084.5987915531553 1004.1784844440489 1002.998885044191 1179.4049360874312 1184.8715736683675 883.2918456858182 812.0043191807885 1356.3946469248838 1009.7475240615017 1112.0440385142635 1.1935954575137635 0.9753199999185498 0.9030024438471632 0.9019416950287675 1.0605739478295884 1.0654897941374737 0.7942957428789712 0.7301907937617826 1.2197310537603192 0.9080103746705623 1.0 10.118998206615682 -8.791744436455758 24.999990583235256 1.103761851985654 0.9524615194225761 0.02704162194573967 0.1430464530306918 249.42693456394846 205762.27947868255 0.025077517858000112 0.026698633996679197 1.6153088166746644e-09 8.791744436455758 -0.15130033256307795 QIAQLKEELQERS(ph)EQLR ddPTM_A549_PD325901_60min_R1 1 QIAQLKEELQERSEQLR 17 2 E5RJB6;E5RK93;Q8TDX6-3;Q8TDX6 E5RJB6 CSGALNACT1 Chondroitin sulfate N-acetylgalactosaminyltransferase 1 1 QIAQLKEELQERS(1)EQLR 48.824 0.0044878999999999995 4833300.0 562.23 740.0 608.71 809.12 1084.7 543.65 584.57 628.76 885.8 878.14 984.07 True False 619.3071757081495 802.3623970302262 650.0207210705872 859.097504755154 1008.5144140118538 539.2226946465828 606.8161312389781 616.2188885473222 848.572906452477 822.6940905356903 863.0356285337 0.717591667403528 0.929697883265193 0.7531794743804197 0.9954368931613671 1.1685663727757365 0.624797721923397 0.703118285243867 0.714013266861624 0.9832420335811684 0.9532562310706105 1.0 9.753276308909983 -8.868208260060891 9.531419961543184 0.9925665518420047 0.8332164629310095 0.17047943857152603 0.1489517611008001 0.3637306157201425 30.12449372874486 0.026426512681740802 0.02810278288442727 1.3545397053391471e-09 8.868208260060891 -0.15935008891099522 QIAQSKEDDDVIVNKPHVS(ph)DEEEEEPPFYHHPFK ddPTM_A549_MK2206_60min_R1 3 QIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFK 34 2 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-2;H7C1M2;H7C2G8;J3QSZ5 P18583-5 SON Protein SON 1 QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK 216.6 2.3129999999999995e-101 81973000.0 6109.3 6557.3 6867.2 6057.3 8195.3 5673.1 6001.299999999999 6117.200000000001 9156.0 9107.1 10518.1 True False 7140.400481955459 6891.038561507173 7841.072221312513 7541.338771922534 6989.782226248267 6273.423676500997 7091.658527914547 6984.331833139308 7082.1806191275455 7049.799784844354 7906.165485207789 0.9031433120537314 0.8716031272555717 0.9917667718925105 0.9538554165141324 0.8840925780425354 0.7934849944942836 0.8969782559172128 0.8834031928887391 0.8957794562203516 0.8916838128463576 1.0 12.94876243741511 -10.541758819587853 0.8286243343238792 1.0005417086817745 0.8971405952722409 0.0 0.05619457758333162 0.5462427895585524 0.6673890507071988 0.0343608226227596 0.009472316214607068 2.8723752795396653e-11 10.541758819587853 -0.10340111340953362 QIAQSKEDDDVIVNKPHVS(ph)DEEEEEPPFYHHPFK ddPTM_A549_PD325901_60min_R1 2 QIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFK 34 2 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-2;H7C1M2;H7C2G8;J3QSZ5 P18583-5 SON Protein SON 1 QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK 248.7 6.637399999999997e-149 200022000.0 4605.7 4775.0 5112.8 4648.0 4988.6 4710.1 4768.0 4819.200000000001 6052.200000000001 5641.3 5215.4 True False 5073.267273462863 5177.406007863956 5459.785353764023 4935.096403626106 4638.21794573572 4671.742507228676 4949.448849149714 4723.077275410738 5797.847081092438 5285.107355249718 4573.93886314455 1.1091681426574707 1.1319359883845335 1.1936725691192251 1.0789598530473716 1.0140533322622896 1.021382805282379 1.0820977274162786 1.0326061228032368 1.2675829858177117 1.1554827279908688 1.0 12.159221366977558 -11.292560878615905 1.8507709999558954 0.9995896820111642 1.128194544830322 0.0 0.08775618354948463 0.46610840470667414 2.8824861738157694 0.07069701003337867 0.013993596882337658 5.0984612325691315e-12 11.292560878615905 0.12860486281915795 QIAS(ph)NSPGSSPK ddPTM_A549_PD325901_60min_R1 1 QIASNSPGSSPK 12 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 QIAS(0.585)NS(0.404)PGS(0.011)SPK 164.53 2.4381e-14 6447400.0 2718.3 2979.1 3130.7 2495.6 3954.4 3232.1 3760.6 2922.7 3512.2 3617.6 3824.4 True False 2994.259814893307 3230.1592121523586 3343.1681284284577 2649.7475440811777 3676.656585939411 3205.7788491993415 3903.711690879281 2864.4044556862045 3364.594448004504 3389.1841186165207 3354.023044869045 0.8927368043800115 0.9630700710580471 0.9967636130416 0.7900206732731722 1.0961930006902987 0.9558010801695337 1.1638893468102864 0.8540205053355687 1.0031518576330687 1.0104832534771235 1.0 11.711676886087922 -6.778860171572539 24.9999963830122 1.0046183734527596 0.9205432940604746 0.23116800900115753 0.08754289946469943 295.5254662700214 424098.42553213553 0.011430930453298002 0.021638672720200647 1.663948300332003e-07 6.778860171572539 -0.08407507939228498 QIASNS(ph)PGSSPK ddPTM_A549_PD325901_60min_R1 1 QIASNSPGSSPK 12 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 QIAS(0.011)NS(0.989)PGS(0.001)SPK 194.12 6.6701e-21 5594600.0 2880.0 3179.3 3134.8 3002.0 4236.1 2747.8 2965.8 3436.6 3416.9 3318.6 3262.3 True False 3172.3754798560553 3447.2307687543184 3347.546379083764 3187.4267219633334 3938.570949751653 2725.4228278301857 3078.665141948034 3368.054317039453 3273.299575589827 3109.06302964418 2861.057781423567 1.1088120975584026 1.2048798144297146 1.1700380190917137 1.1140728239250646 1.3766135641594597 0.952592724804777 1.0760583592325048 1.177205975673662 1.1440871962960293 1.0866830617091605 1.0 11.482332919034633 -7.284177163430825 24.999953306079238 1.072175111978743 1.1895689123235131 0.3260579985437252 0.0872616348185155 805.3104801765626 885428.171117433 0.013832526707587483 0.022121580990295833 5.1978391581214434e-08 7.284177163430825 0.1173938003447701 QIDNPDYK ddPTM_A549_PD325901_60min_R1 1 QIDNPDYK 8 0 P27797;K7EJB9;K7EL50 P27797 CALR Calreticulin 0 127.3 0.0029429 6691200.0 5064.0 5594.0 6716.4 5787.8 7255.8 6168.9 6179.6 6914.4 6812.0 7232.6 7383.5 False True 5578.093552080235 6065.426012144709 7172.215292994189 6145.299260952489 6746.177639151114 6118.662523692274 6414.768059606872 6776.486867758134 6525.71532936811 6775.932401676762 6475.3763078628235 0.8614315658082992 0.9366908923547306 1.107613666295381 0.9490258123671463 1.0418201689621445 0.9449122696178437 0.9906401967431055 1.0465008588813105 1.0077739144587106 1.0464152320304512 1.0 12.660748320196777 -5.5265542731223 24.990452737772745 1.0064302169483426 0.8802463610515359 0.5149701228575894 0.04514743009058443 45.34946447482472 308341.76076203486 0.005212648888513183 0.020383002079621505 2.974717489721511e-06 5.5265542731223 -0.1261838558968067 QIDS(ph)S(ph)EEDDDEEDYDNDKR ddPTM_A549_PD325901_60min_R1 4 QIDSSEEDDDEEDYDNDKR 19 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 2 QIDS(1)S(1)EEDDDEEDYDNDKR;QIDS(1)S(1)EEDDDEEDYDNDKR;QIDS(1)S(1)EEDDDEEDYDNDKR;QIDS(1)S(1)EEDDDEEDYDNDKR 96.544 4.819300000000001e-07 23712400.0 4704.650000000001 5395.3 5828.57 4747.43 6601.5 4551.049999999999 5224.38 5164.94 5734.219999999999 6075.639999999999 6319.5599999999995 True False 5182.262604619724 5849.980865806997 6224.131810238687 5040.6679689041885 6137.833413938649 4513.987757695817 5423.1966397904325 5061.921219882951 5493.2306746871955 5692.023053524788 5542.294182991477 0.9350392515293324 1.0555161225038843 1.123024438027789 0.9094912327774464 1.1074535582710132 0.8144619554026222 0.9785111473211693 0.9133259716557949 0.9911474370207827 1.027015684406073 1.0 12.436267575250234 QIDS(ph)SEEDDDEEDYDNDKR ddPTM_A549_MK2206_60min_R1 1 QIDSSEEDDDEEDYDNDKR 19 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 QIDS(0.5)S(0.5)EEDDDEEDYDNDKR 261.78 4.8358999999999985e-111 23318000.0 3773.3 3594.8 4300.1 3306.1 4691.8 3872.0 3259.5 3525.3 5178.5 4963.9 5210.5 True False 4410.140791672128 3777.759965367756 4909.918840119108 4116.094648416466 4001.6424351898777 4281.732469974416 3851.7089583486036 4025.022070778464 4005.5780183652246 3842.5515424217256 3916.5890475157275 1.126015708609883 0.9645535744333377 1.2536211434369007 1.0509386097137978 1.0217161889190542 1.093229955460938 0.9834345425624174 1.0276855758792245 1.0227210385797159 0.9810964325856542 1.0 11.935382044501866 -7.182959462551747 1.0572914595442862 1.0111328314267074 1.0986802311111907 0.24924769992131246 0.06915644323909903 0.5404577682133722 1.1875619848255565 0.010568214039931167 0.024679707333761916 6.56206514366807e-08 7.182959462551747 0.08754739968448333 QIDS(ph)SEEDDDEEDYDNDKR ddPTM_A549_PD325901_60min_R1 2 QIDSSEEDDDEEDYDNDKR 19 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 QIDS(0.923)S(0.077)EEDDDEEDYDNDKR;QIDS(0.968)S(0.032)EEDDDEEDYDNDKR 183.58 9.215699999999999e-44 44833000.0 6097.299999999999 7119.9 7669.0 6144.7 8238.5 6471.799999999999 7533.5 7881.0 7480.799999999999 7158.799999999999 6742.6 True False 6716.293407404979 7719.9189602912265 8189.4644574433405 6524.244163373781 7659.856181282066 6419.095806518448 7820.191464989382 7723.8072724751055 7166.407991182759 6706.792146271547 5913.302944862993 1.135793898947721 1.3055172434548914 1.3849221888010481 1.103316407802432 1.2953600132961798 1.0855347453650834 1.3224743494298634 1.3061747968087674 1.2119128781332544 1.1341871385260032 1.0 12.529748474474918 -10.336810450885674 0.6879768029604572 0.9949675648610676 1.244635213245302 0.27161729743588414 0.1000208721526107 0.4795844518960303 0.4091760187211708 0.0639946951899485 0.01864043408182787 4.6045749777136373e-11 10.336810450885674 0.2496676483842344 QIDSGSNLTT(ph)DLIVQR ddPTM_A549_PD325901_60min_R1 2 QIDSGSNLTTDLIVQR 16 0 I3L3V9;I3L1L9;I3L1R7;Q99447-2;Q99447-4;Q99447;Q99447-3 I3L3V9 PCYT2 Ethanolamine-phosphate cytidylyltransferase 1 QIDS(0.001)GS(0.018)NLT(0.278)T(0.702)DLIVQR;QIDS(0.009)GS(0.005)NLT(0.381)T(0.605)DLIVQR 96.208 5.403e-06 5012200.0 4472.6 5065.9 4235.8 3918.6 4745.1 4657.700000000001 5363.3 4763.5 4974.5 5145.6 5383.4 True False 4926.655059445906 5492.821171777599 4523.266859934603 4160.643022213697 4411.820545706323 4619.769235455515 5567.403316410373 4668.488255606544 4765.4390642897315 4820.705937846411 4721.275928184296 1.0435007685180124 1.1634187993519842 0.9580602635258721 0.8812539418372425 0.9344551373007798 0.9785001566795061 1.1792158308678813 0.9888191935017758 1.0093540680055995 1.0210599869981234 1.0 12.2049610863056 -5.7680639745235505 24.99373334945825 0.99819218344251 1.1034597894268898 0.24203223562285503 0.07412134181299854 149.30618456528458 563322.1580839145 0.010181868610961656 0.03273287717250868 1.7058310900021974e-06 5.7680639745235505 0.10526760598437979 QIDSS(ph)EEDDDEEDYDNDKR ddPTM_A549_MK2206_60min_R1 1 QIDSSEEDDDEEDYDNDKR 19 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 QIDS(0.153)S(0.847)EEDDDEEDYDNDKR 146.34 4.0076e-21 23131000.0 1796.0 2059.6 1907.3 1994.4 2377.3 1839.3 1505.7 1969.2 2458.2 2584.4 2791.9 True False 2099.1208920157783 2164.424842737129 2177.78381985516 2483.0280895320197 2027.6023191902684 2033.9335051714722 1779.2661999035101 2248.3401304220756 1901.4216249387644 2000.5822450562475 2098.594177479927 1.0002509844645064 1.0313689354347937 1.0377346145457846 1.1831863998182515 0.9661717072069129 0.9691885772855322 0.8478371945356875 1.0713553647241931 0.9060454114201655 0.9532963859923713 1.0 11.035207492386524 -6.960163155848559 24.965138078637672 0.9565702130993845 1.061005381653381 0.3569966598096791 0.06718122635530678 131.49418612221385 82404.81179380222 0.009675772561064775 0.018285477119319497 1.0960663483344335e-07 6.960163155848559 0.1044351685539966 QIDSS(ph)PVGGETDETTVSQNYR ddPTM_A549_MK2206_60min_R1 4 QIDSSPVGGETDETTVSQNYR 21 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 QIDS(0.014)S(0.986)PVGGETDETTVSQNYR;QIDS(0.056)S(0.944)PVGGETDETTVSQNYR;QIDS(0.012)S(0.988)PVGGETDETTVSQNYR;QIDS(0.076)S(0.924)PVGGETDETTVSQNYR 301.92 3.310299999999999e-163 93020000.0 12292.73 14604.43 13339.630000000001 12551.560000000001 18728.3 14234.2 12633.47 15317.2 19704.8 19954.0 20722.5 True False 14367.44229560641 15347.733106435913 15231.390120513015 15626.692763460933 15973.39187922899 15740.453596102754 14928.807968715555 17488.460006957663 15241.694262099665 15446.377541345126 15576.531338095132 0.9223775167754015 0.9853113490614144 0.9778422287933891 1.0032203206398798 1.025478107578628 1.0105236688740016 0.9584167132386235 1.1227441865819365 0.978503745877199 0.9916442374797724 1.0 13.927086381981756 -4.498518730108537 1.0773568578034132 1.0011689159388582 0.6500451350494985 0.26258646665674246 0.040755534398352174 8.227863077470383 2.2916854548181442 0.005804953693390263 4.920059913203397 3.173081813263918e-05 4.498518730108537 -0.3511237808893597 QIDSS(ph)PVGGETDETTVSQNYR ddPTM_A549_PD325901_60min_R1 4 QIDSSPVGGETDETTVSQNYR 21 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 QIDS(0.02)S(0.98)PVGGETDETTVSQNYR;QIDS(0.015)S(0.985)PVGGETDETTVSQNYR;QIDS(0.021)S(0.979)PVGGETDETTVSQNYR;QIDS(0.074)S(0.926)PVGGETDETTVSQNYR 318.69 3.649399999999999e-184 112610000.0 10141.66 9655.43 10681.199999999999 9234.599999999999 12753.7 9320.8 10707.9 11404.2 11275.6 11963.099999999999 11463.300000000001 True False 11171.233857304505 10469.126971834527 11406.090463273404 9805.000268701724 11857.924109876452 9244.894495101391 11115.39499408771 11176.734284578179 10801.72574395523 11207.747824364578 10053.386771845862 1.1111910951828823 1.0413532483553631 1.1345520392407202 0.9752932510425506 1.1794954654568877 0.9195801081672672 1.1056368611238516 1.1117382170034689 1.0744365047413738 1.1148231017781451 1.0 13.295393976062734 -10.592101989162579 0.8755294151715657 0.9998335405058517 1.0710938363140792 0.0 0.0772908118713069 0.9390893285038117 1.283993323833755 0.042268233188337424 0.01157501645728599 2.5579851024036297e-11 10.592101989162579 0.07126029580822746 QIEELKGQEVSPK ddPTM_A549_PD325901_60min_R1 2 QIEELKGQEVSPK 13 1 D6R974;D6RE83;D6R956;P09936 D6R974 UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 0 ; 123.38 5.9857e-06 17555100.0 12010.1 12092.7 13591.9 11296.2 13823.900000000001 12961.9 13511.400000000001 14235.2 14421.599999999999 14151.8 15234.4 False True 13229.356510631676 13111.794268334334 14514.32806873439 11993.940618468421 12852.956953866013 12856.342583904254 14025.583720721783 13951.267768701635 13815.510304464931 13258.252932838697 13360.665378818372 0.9901719813749045 0.9813728505708561 1.0863476973044324 0.8977053371520913 0.9619997649400556 0.9622531677416563 1.0497668583899686 1.0442045641543862 1.0340435833658148 0.9923347795131493 1.0 13.705704237272947 -7.752463666726073 24.98982761829644 1.0213387127068867 0.9803171842665581 0.19585478417794178 0.04432960059949476 270.73975954935645 753778.9745499992 0.006722031418811987 0.009892446388140083 1.768220141647998e-08 7.752463666726073 -0.04102152844032858 QIFEDHVFCHS(ph)L ddPTM_A549_MK2206_60min_R1 1 QIFEDHVFCHSL 12 0 Q13137-5;Q13137-2;Q13137;Q13137-3;Q13137-4 Q13137-5 CALCOCO2 Calcium-binding and coiled-coil domain-containing protein 2 1 QIFEDHVFCHS(1)L 48.527 0.010183 1257500.0 165.46 0.0 95.226 180.14 228.67 141.62 195.84 213.03 304.63 207.22 312.45 True False 193.38560289138692 0.0 108.73047870263063 224.27430808679188 195.03294591731725 156.60613440025224 231.42159300597964 243.2276548770134 235.63179139414862 160.40885807945972 234.860041818691 0.8234078534341664 0.0 0.46295861084181017 0.9549274808523147 0.8304220011502861 0.6668062101477024 0.9853595835797143 1.035628082978807 1.0032859977775759 0.6829976561244647 1.0 7.875657469435186 -6.229761381405045 4.467819506727637 0.9651906866435812 0.37372738824158463 0.44474326055271773 0.22131144842831116 0.09744068595794786 4.726357235550754 0.026627608331374775 0.07135306521654529 5.891672782871121e-07 6.229761381405045 -0.5914632984019965 QIFLGGVDK ddPTM_A549_MK2206_60min_R1 2 QIFLGGVDK 9 0 P05141;P12236 P05141;P12236 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed 0 ; 127.4 0.00014414 7864600.0 4476.3 5121.0 4644.299999999999 4619.200000000001 6857.9 4806.1 4618.700000000001 4804.5 7206.299999999999 6619.0 6720.0 False True 5231.79000497229 5381.637026440492 5302.931575815714 5750.904207363772 5849.111994605198 5314.678311969018 5457.858004578835 5485.55258816416 5574.084556096417 5123.763302904852 5051.238537435122 1.035743999456586 1.0654094013887407 1.0498279850605499 1.13851368624613 1.1579560045040385 1.0521535010832537 1.0804989635967939 1.085981694887363 1.103508479115853 1.0143578183711268 1.0 12.302421457226869 -10.791373889609458 0.9078298893484675 0.9969171353316829 1.0873970153317674 0.4164180108735771 0.03554672200467377 0.4835925144263707 0.6676248959631833 0.030193077988034986 0.0066145126014352145 1.6166876115488592e-11 10.791373889609458 0.09047988000008444 QIFLGGVDK ddPTM_A549_PD325901_60min_R1 2 QIFLGGVDK 9 0 P05141;P12236 P05141;P12236 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed 0 ; 134.25 0.00012839 12147000.0 10166.6 10568.2 11052.8 10334.5 13171.0 11370.8 11262.3 11755.400000000001 11212.8 11002.2 11751.900000000001 False True 11198.705747744652 11458.819303101127 11802.909473885742 10972.838593647586 12245.914397483302 11278.199974776722 11690.892989467038 11520.929325067098 10741.565009562357 10307.519214352804 10306.490801432003 1.0865682571791249 1.1118060961650513 1.145191869986031 1.0646532175745986 1.1881749698725614 1.0942812827436579 1.1343233322289177 1.1178323977610651 1.0422136124227563 1.0000997830338778 1.0 13.331265580814218 -8.91348223341146 1.9383691947914272 1.0153468305716946 1.1198239704995645 0.6766991794077077 0.03208922725959569 0.12421224806914885 0.9234232694232937 0.00587099140832744 0.006011952843761569 1.2204437469563256e-09 8.91348223341146 0.10447713992786989 QIFLGGVDKR ddPTM_A549_MK2206_60min_R1 2 QIFLGGVDKR 10 1 P05141 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed 0 ; 103.34 0.00037850000000000004 7103700.0 3957.9 4524.8 4457.1 3843.4 5693.5 5127.0 4602.1 4299.1 6385.799999999999 6207.3 6330.5 False True 4625.896758635439 4755.092993016585 5089.183800910409 4785.033172536783 4855.993692133846 5669.535736972842 5438.241999452712 4908.510590441574 4939.426496027159 4805.066618842921 4758.4621370882505 0.972141129921036 0.9992919678722657 1.0695017958101334 1.005583954370769 1.020496444488949 1.1914638750161592 1.1428570497737374 1.0315329720045099 1.0380300092184074 1.0097940217683834 1.0 12.216279676330274 -4.058584922196957 12.015725845021313 1.0359393498977174 0.6184499446466737 0.0 0.06418573132192067 0.0 0.0 0.008834488481528048 0.0 8.73806111326032e-05 4.058584922196957 -0.4174894052510437 QIFLGGVDKR ddPTM_A549_PD325901_60min_R1 2 QIFLGGVDKR 10 1 P05141 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed 0 ; 100.88 0.00044433 13423300.0 4103.3 4494.1 4706.1 4398.0 5538.6 4901.3 5712.0 4667.2 5637.9 5622.0 4577.0 False True 4519.863995310193 4872.833579045322 5025.484246078249 4669.654471417302 5149.587843132716 4861.385437820835 5929.37328572633 4574.10903465243 5400.958669325374 5267.025960543476 4014.05801599352 1.1260086369707043 1.2139419907809297 1.2519710044186771 1.1633251071139579 1.2828882449169439 1.21108997888203 1.4771518652947897 1.1395224026228459 1.345510864019882 1.3121449514575174 1.0 11.970845753076937 -10.918101582175728 1.1311667745804623 0.9977574450850066 1.2545185295396475 0.0 0.1316328242891514 0.3328904300918621 0.7456162901360424 0.0679475702132344 0.015500487255968688 1.2075313585511118e-11 10.918101582175728 0.25676108445464085 QIFNGTFVK ddPTM_A549_MK2206_60min_R1 2 QIFNGTFVK 9 0 P18124;A8MUD9;C9JZ88;C9JIJ5 P18124 RPL7 60S ribosomal protein L7 0 ; 118.18 0.00046829 5620600.0 4974.6 4933.700000000001 5250.1 4514.5 6708.9 5100.700000000001 4777.0 4713.3 7941.9 5928.2 8069.7 False True 5814.190862706957 5184.804256463478 5994.643125162047 5620.552702663604 5722.029697226093 5640.452688429369 5644.919065510442 5381.424708875877 6143.072330608239 4589.015502686291 6065.770777610147 0.9585246584272823 0.8547642907314474 0.988273930048487 0.9266015661867865 0.9433310138172606 0.9298822680951441 0.9306185928335531 0.8871790422314811 1.012743896172837 0.7565428485403989 1.0 12.566475264943083 -8.777482212071359 24.99996981419897 1.0060179608116668 0.9276999248839292 0.0 0.08210804016631057 119.84368446910374 186754.8733378499 0.005234970474456339 0.005581436577221623 1.6692361747522918e-09 8.777482212071359 -0.07831803592773767 QIFNGTFVK ddPTM_A549_PD325901_60min_R1 2 QIFNGTFVK 9 0 P18124;A8MUD9;C9JZ88;C9JIJ5 P18124 RPL7 60S ribosomal protein L7 0 ; 134.25 0.00012839 8741300.0 7920.2 9004.9 9164.0 8870.9 10714.2 8986.0 9082.0 9877.400000000001 9602.5 10740.5 11400.9 False True 8724.252873456928 9763.774525699304 9785.924147608648 9418.835345724357 9961.671553983419 8912.820995298804 9427.620479861098 9680.387508329599 9198.940318593257 10062.342997014808 9998.661576259668 0.8725420704478454 0.976508150739088 0.9787234094255042 0.9420096153757197 0.9963005026228633 0.8914014068103844 0.9428882463874543 0.968168332781083 0.9200171691413949 1.0063689945168603 1.0 13.287519272896956 -10.960968661664033 1.1911177304817453 1.000397650264854 0.9434908845143812 0.29150834192584496 0.03583933854859937 0.5297870320516193 1.3208777074755995 0.02493954107554853 0.005618624483209159 1.0940353081203237e-11 10.960968661664033 -0.05690676575047271 QIIGQAK ddPTM_A549_PD325901_60min_R1 1 QIIGQAK 7 0 O00483 O00483 NDUFA4 Cytochrome c oxidase subunit NDUFA4 0 76.847 0.048458 1413200.0 2522.3 3338.7 3069.7 2812.6 3694.9 3858.6 3544.3 3692.2 3600.2 3684.4 4053.1 False True 2778.3620391808786 3620.0639661686696 3278.02830160566 2986.32791412194 3435.3829707130103 3827.176840914754 3679.1802760153805 3618.556174525131 3448.8961140327433 3451.766355216364 3554.5943947177902 0.7816256176259067 1.018418295923768 0.9221947534933623 0.8401318357334082 0.9664627209838819 1.0766845428558678 1.0350492538565659 1.0179941148566456 0.9702643202155169 0.9710717938299146 1.0 11.79546923181656 -6.986572636428842 22.035118105483885 0.9990026410809725 0.9021448077369456 0.4480960056527069 0.06149171306922829 47.39582568113505 77776.79910162686 0.008509013591008412 0.01606927629695489 1.031400561661852e-07 6.986572636428842 -0.09685783334402687 QILDPAASVTGS(ph)RR ddPTM_A549_PD325901_60min_R1 2 QILDPAASVTGSRR 14 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 QILDPAAS(0.002)VT(0.267)GS(0.731)RR;QILDPAAS(0.002)VT(0.24)GS(0.758)RR 76.145 0.00033792 11999800.0 2440.9 2494.8 3037.1000000000004 3142.9 3547.9 3491.7 2885.5 3461.0 3712.5 3790.6 3501.3 True False 2688.6983711043918 2705.0455515013628 3243.215869565937 3337.0297949562146 3298.7077435905376 3463.2647528694474 2995.3092815061855 3391.9676398980246 3556.476535566514 3551.260869092156 3070.6622965693937 0.875608618410517 0.8809322843881252 1.0561942526826618 1.086745943598035 1.0742658830558869 1.1278559536614226 0.9754603379383678 1.1046371473957262 1.1582115491957166 1.1565130014654157 1.0 11.584334141862131 -5.777004965684859 4.770098375401774 1.0754696339719647 0.8745440904716003 0.6740772663507943 0.05466923491833674 0.08874112560707799 5.0933003232486564 0.008671159983184433 0.031426723120997396 1.6710715073170259e-06 5.777004965684859 -0.2009255435003644 QIPS(ph)AEDLETDGGGPGQVVDDGLEHR ddPTM_A549_PD325901_60min_R1 1 QIPSAEDLETDGGGPGQVVDDGLEHR 26 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;Q8WUI4-10 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 QIPS(1)AEDLETDGGGPGQVVDDGLEHR 102.58 1.7638e-12 6058700.0 1828.2 1552.2 1859.9 1868.7 1696.9 1791.7 2198.0 2453.1 2166.4 2353.5 2658.9 True False 2013.7975181502932 1683.0093414463738 1986.1239984872686 1984.1253548743764 1577.7155979872007 1777.1089892362413 2281.646092791752 2404.1709960802787 2075.3537418589362 2204.899608349178 2331.872156155817 0.8635968798006997 0.7217416859682741 0.8517293682864125 0.8508722700069824 0.6765875195268539 0.7620953766890358 0.9784610561811997 1.0310046327941276 0.889994649312267 0.9455490956176782 1.0 11.187272980260603 -7.761700138364695 24.99998975831478 0.9563478560710604 0.7854909036597711 0.6699424121030306 0.06304513321834992 3.6771907605196814 352561.7620147273 0.01059495357833866 0.015143990540858555 1.7310111353336555e-08 7.761700138364695 -0.1708569524112893 QIQEHEQDS(ph)ALR ddPTM_A549_MK2206_60min_R1 1 QIQEHEQDSALR 12 0 Q9UL54-2;Q9UL54-4;Q9UL54-3;Q9UL54 Q9UL54-2;Q9UL54-3 TAOK2 Serine/threonine-protein kinase TAO2 1 QIQEHEQDS(1)ALR 44.44 0.01859 1859100.0 456.34 904.96 541.55 301.53 869.63 729.18 496.02 685.46 1006.3 802.21 1050.1 True False 533.3590355581739 951.0185986033174 618.3499332263208 375.40486353619593 741.7085789918947 806.34134360949 586.1404134131234 782.6260541332095 778.3746567308917 620.9902038409583 789.3311887143777 0.6757100735204469 1.2048410251624389 0.7833846452126864 0.47559866999254924 0.9396671379474459 1.021550085868034 0.7425785548494529 0.991505296284961 0.9861192207527851 0.786729591734992 1.0 9.624486945099514 -8.28882880533176 1.0738124082047436 0.9979196783731217 0.8357006051513944 0.018952270762059298 0.19097376793456514 0.7278490148807085 1.6391481668263228 0.03486527721655577 0.045414810488884204 5.14246322541915e-09 8.28882880533176 -0.16221907322172724 QIQT(ph)PPDAGKLNSENQPK ddPTM_A549_MK2206_60min_R1 1 QIQTPPDAGKLNSENQPK 18 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 QIQT(0.999)PPDAGKLNS(0.001)ENQPK 60.602 0.0012902999999999999 3906400.0 1266.1 1670.9 1636.3 1684.6 2038.2 1333.0 1405.6 1470.3 2422.4 2076.1 2418.6 True False 1479.786726826936 1755.9416730090654 1868.3519448586985 2097.3270756245684 1738.3834799872134 1474.0571752262126 1660.9793256188984 1678.7195276049054 1873.7302677779119 1607.1075680859287 1817.9948700358013 0.8139663929842634 0.965867232053568 1.0276992392293745 1.1536485114412156 0.9562092328417735 0.8108148155540089 0.913632570143715 0.9233906845797902 1.0306576210201368 0.8840000566416781 1.0 10.82813241324562 -8.767652898089977 24.866718548903844 1.0144772118566059 0.9507852543084443 0.0 0.09782347103125191 269.3705001707701 1078027.0369382706 0.016428899680038116 0.01770356549835052 1.7074464891469477e-09 8.767652898089977 -0.06369195754816159 QIQT(ph)SPVPVR ddPTM_A549_MK2206_60min_R1 1 QIQTSPVPVR 10 0 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 QIQT(0.5)S(0.5)PVPVR 122.55 3.7647e-05 10295000.0 2086.3 2864.0 1797.2 1948.6 3038.9 2357.9 2523.9 2694.7 3513.8 3592.5 3262.5 True False 2438.416434862205 3009.765366866935 2052.0699842938675 2426.0070874759776 2591.8818356064867 2607.4114129526542 2982.459960109234 3076.6819771726423 2717.9299103855783 2780.951754900392 2452.3312095806655 0.9943258991020059 1.2273078591947568 0.8367833742346572 0.9892656742279159 1.0569052930047258 1.0632378704663252 1.216173389816793 1.2545947974534555 1.1083045796453932 1.1340033287656601 1.0 11.259938125905354 -7.015209675569067 3.5456624666501315 1.083451247884608 1.0151974138668678 0.13348719382764063 0.11099124077637271 0.569406858657685 15.235466751166568 0.017672503593446284 0.03324061130371737 9.65584586215663e-08 7.015209675569067 -0.0682538340177401 QIQT(ph)SPVPVR ddPTM_A549_PD325901_60min_R1 1 QIQTSPVPVR 10 0 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 QIQT(0.77)S(0.23)PVPVR 76.332 0.0015691 11011000.0 3216.7 3206.4 3039.8 3336.9 4516.7 3530.5 3031.6 3608.0 3615.9 3674.8 4523.5 True False 3543.257015990619 3476.614580861779 3246.0991078023553 3543.0127343502486 4199.4625737691 3501.748778533545 3146.9691969551736 3536.035609578754 3463.936297630967 3442.7725008547072 3967.1381768290753 0.8931519039810044 0.8763532869028094 0.8182470494125705 0.893090327693645 1.0585622145195157 0.8826888861563388 0.793259285833734 0.8913315977325245 0.8731574609280899 0.8678226841109193 1.0 11.953882932600125 -10.696359893788443 0.8887605135099631 1.0021272005700674 0.8864913087839058 0.0 0.07362883303154737 0.6407024160302442 0.8740602066991165 0.04891571535973232 0.011930171077783942 2.012056195865027e-11 10.696359893788443 -0.11563589178616163 QIQTS(ph)PVPVR ddPTM_A549_MK2206_60min_R1 1 QIQTSPVPVR 10 0 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 QIQT(0.042)S(0.958)PVPVR 131.02 1.1587e-06 8975400.0 2320.7 2559.0 2146.0 1818.3 2464.9 2247.0 2478.2 2279.7 3332.1 3012.3 3087.1 True False 2712.3774243324165 2689.242169627266 2450.335069160159 2263.783581626589 2102.3164752332864 2484.776048562117 2928.456861659612 2602.8544562884467 2577.3846702703017 2331.81933786679 2320.4878703743975 1.1688823970860878 1.1589124011207919 1.055956853058151 0.9755636349270553 0.9059803768308815 1.0707989816646672 1.2620005038798683 1.1216841464758405 1.1107080985751738 1.004883226340918 1.0 11.180212440952161 -10.773020018093723 1.0939219043316548 1.0014827527172365 1.0902211793969718 0.12605482902412557 0.0907448402914631 0.9622604982719049 2.0961597717921636 0.0626397478134941 0.01695186424266476 1.6864752882775018e-11 10.773020018093723 0.0887384266797353 QIQTS(ph)PVPVR ddPTM_A549_PD325901_60min_R1 1 QIQTSPVPVR 10 0 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 QIQT(0.282)S(0.718)PVPVR 76.942 0.0014372999999999999 12921000.0 4617.0 5011.3 5757.2 4309.3 5537.1 4333.0 5219.7 4933.8 5507.4 5720.3 5622.7 True False 5085.714441144239 5433.619838158881 6147.918212856018 4575.475673869613 5148.193197957994 4297.713484601573 5418.3385398294395 4835.391488508775 5275.943130499403 5359.119281767492 4931.143545231976 1.0313458520309595 1.101898532930107 1.2467530414523356 0.9278731458332287 1.044016088912254 0.8715449966483172 1.098799596914704 0.9805821802093381 1.0699228448948361 1.0867903626430293 1.0 12.267706534860695 -6.272340538449279 24.997237068832472 1.0182500395622698 1.1241890883135504 0.29374115332149797 0.07982989402896042 664.3827678468818 1523484.2576411322 0.010375175820338213 0.02434275841854709 5.341453617494233e-07 6.272340538449279 0.10593904875128057 QIQTS(ph)PVPVRK ddPTM_A549_MK2206_60min_R1 1 QIQTSPVPVRK 11 1 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 QIQT(0.16)S(0.84)PVPVRK 53.001000000000005 0.0090545 31579000.0 5688.2 6653.3 5680.0 5408.4 9171.5 6607.8 5692.9 5807.0 8692.4 8411.5 8735.1 True False 6648.229096861997 6991.92455145802 6485.509409519901 6733.458242792301 7822.384499412588 7307.0330100973515 6727.226239908815 6630.160033191649 6723.585278910474 6511.336307959537 6565.933593504395 1.0125337093629787 1.0648789622811679 0.9877512949469888 1.025514216204324 1.1913590638734433 1.112870379518629 1.0245650742742791 1.009781768087145 1.0240105513040891 0.9916847642810659 1.0 12.680784443527235 -7.978576572555561 24.03264699871988 1.0118067127706545 1.066319268684111 0.2281302029310942 0.051550699963838535 198.30725493349806 222458.53819568525 0.00842522961623938 0.011640475420642844 1.0505662081380558e-08 7.978576572555561 0.054512555913456495 QIS(ph)DGEREELNLTANR ddPTM_A549_MK2206_60min_R1 1 QISDGEREELNLTANR 16 1 O95816;O95816-2 O95816 BAG2 BAG family molecular chaperone regulator 2 1 QIS(1)DGEREELNLTANR 136.14 5.5978e-11 11856000.0 1074.6 1263.1 816.7 1053.6 1265.9 1123.5 1083.8 817.88 1348.0 1672.1 1531.4 True False 1255.9662085524249 1327.3863948636956 932.5203406258627 1311.7320472979018 1079.6877869275902 1242.3880242810585 1280.7124310655672 933.8169946524515 1042.6801523136667 1294.3714486761148 1151.1111155101407 1.0910903314453837 1.1531348946060993 0.8101045399188899 1.139535557969639 0.9379527070669474 1.079294611563599 1.1125880150136425 0.8112309768102705 0.9058032176603381 1.124453956907961 1.0 10.168811386644936 -8.235897394490543 24.948587118585518 0.9434537525608789 1.0419663116378364 0.10439171349436971 0.116817618641636 995.2942910994856 972172.6065649616 0.016198802314533748 0.020908122054086382 5.8090164392236676e-09 8.235897394490543 0.09851255907695744 QIS(ph)EDSER ddPTM_A549_MK2206_60min_R1 2 QISEDSER 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 QIS(1)EDSER;QIS(0.998)EDS(0.002)ER 96.113 0.002493 8059700.0 1036.8200000000002 1413.4 1053.78 921.45 1122.51 815.78 853.26 909.53 1096.8600000000001 1424.38 1063.16 True False 1211.8098681847434 1485.3360228804918 1203.2218495711058 1147.2052913654618 957.3902659800053 902.1052981290618 1008.2862972236635 1038.4586628188047 848.422961325496 1102.6115687251267 799.1480302767151 1.516377219581132 1.8586494198905494 1.5056307517325358 1.4355354050841214 1.1980136716954641 1.1288337879237422 1.2617015359151065 1.2994572012637324 1.0616593286624492 1.3797338252130005 1.0 9.642318955462715 -6.133166843789562 0.35965735676272437 1.0072581639883649 1.9908662027519979 0.5063562095140337 0.16450592418682428 1.1028169617184829 0.14894340737973288 0.038437942101347496 0.4260209935478843 7.359243216457254e-07 6.133166843789562 0.983608038763633 QIS(ph)EDSER ddPTM_A549_PD325901_60min_R1 2 QISEDSER 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 QIS(0.991)EDS(0.009)ER;QIS(0.967)EDS(0.033)ER 104.79 0.0020340999999999996 12606400.0 1572.8899999999999 2069.8 2223.5 2072.04 2803.8 2102.43 2480.7 1917.6399999999999 2410.8 2026.77 2013.21 True False 1732.5686348995812 2244.2293099637313 2374.4000809916893 2200.0252048557313 2606.8707605848963 2085.308507138445 2575.1043959911262 1879.3911658405227 2309.482459782829 1898.7993963092676 1765.5979327896698 0.9812928542355609 1.2710874136660417 1.344813582353998 1.2460510765209496 1.4764804105009364 1.1810777915012778 1.4584885653566804 1.064450252765678 1.3080455164182334 1.075442693404799 1.0 10.785941130246444 -10.855196277019095 0.7099967872506647 0.965221840312145 1.2714719385682969 0.2563010850935258 0.14271415146706615 0.857415331693092 0.6180776229795382 0.16290318352285077 0.025576335198962127 1.3957374225870882e-11 10.855196277019095 0.3062500982561519 QIS(ph)EETESVDNR ddPTM_A549_PD325901_60min_R1 2 QISEETESVDNR 12 0 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 QIS(0.988)EET(0.009)ES(0.004)VDNR;QIS(0.793)EET(0.205)ES(0.001)VDNR 69.602 0.0035339 8550900.0 577.09 612.19 730.22 591.03 674.78 616.64 467.37 586.5699999999999 407.7 624.26 455.78000000000003 True False 635.6757519687958 663.781399780992 779.7771203695753 627.53658077348 627.3857806646255 611.6182882863403 485.1560211046774 574.8704011947366 390.56578681494096 584.844117063122 399.72194942746927 1.5902948358960234 1.6606078318484663 1.9507988527687 1.569932753686193 1.5695554911689094 1.5301093401610169 1.213733751172727 1.4381757169405793 0.9770936706737199 1.463127351151988 1.0 8.64285298560218 -8.00395621751111 0.739832964876636 0.9764916471841709 1.7171115147462328 0.49265363525482897 0.1959148366157989 0.15907261181597532 0.17626267836384624 0.02772602173617942 0.04423596850205425 9.909318385759413e-09 8.00395621751111 0.7406198675620619 QIS(ph)LPDLSQEEPQLK ddPTM_A549_MK2206_60min_R1 2 QISLPDLSQEEPQLK 15 0 H0YBZ4;Q15390-2;Q15390 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 QIS(0.995)LPDLS(0.005)QEEPQLK;QIS(0.996)LPDLS(0.004)QEEPQLK 174.52 2.0506e-27 4524300.0 2386.1099999999997 3075.91 2342.3900000000003 2288.13 3523.5 2782.7799999999997 2581.8 2507.0699999999997 3913.0 3327.35 4207.4 True False 2788.827033211454 3232.460680726141 2674.5761242544563 2848.721952718058 3005.1978175522263 3077.251932540135 3050.8796406394945 2862.4548500798674 3026.711747776986 2575.699324055063 3162.586461667341 0.8818184315318803 1.022094010679462 0.8456926495677206 0.900757018739715 0.9502342003854218 0.9730174873757548 0.9646786507240804 0.9050993181608569 0.9570368381901184 0.8144281129620511 1.0 11.62688920671839 -10.601781621513892 0.2044559658996832 1.045976042518902 0.9122308615777849 0.0 0.07202024133802029 7.333869474559181 0.47455568583549623 0.26594917842143323 0.05938367037613158 2.5016029391237592e-11 10.601781621513892 -0.1337451809411171 QIS(ph)LPDLSQEEPQLK ddPTM_A549_PD325901_60min_R1 2 QISLPDLSQEEPQLK 15 0 H0YBZ4;Q15390-2;Q15390 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 QIS(0.995)LPDLS(0.005)QEEPQLK;QIS(1)LPDLSQEEPQLK 230.33 2.0272e-54 14239700.0 4564.7 4928.9 4104.8 4609.0 5796.2 3792.1000000000004 4671.2 4711.299999999999 5319.4 5313.7 4453.1 True False 5028.104983645464 5344.275700976056 4383.376412167609 4893.687462201528 5389.094907804472 3761.2183948667493 4848.965072178721 4617.329425556648 5095.844116711789 4978.192075158286 3905.396930526706 1.287476042279611 1.36843342585802 1.1223894754217567 1.2530576403002232 1.379909649050107 0.9630822325554212 1.2416062076242682 1.182294529261569 1.304821048247337 1.2746955466283156 1.0 11.93125347082715 -10.886945278525094 1.0198140910371314 0.9934191203613107 1.235594629432915 0.0 0.13707058430300553 0.47668693404144186 0.8399051957462227 0.08692187352923185 0.018672134279551472 1.2973427269753786e-11 10.886945278525094 0.24217550907160423 QIS(ph)QDVK ddPTM_A549_PD325901_60min_R1 2 QISQDVK 7 0 E9PIJ1;E9PJF6;A0A590UK85;A0A590UJY6;A0A5F9UK94;H0Y360;Q01433-3;Q01433-5;Q01433-2;Q01433-4;Q01433 E9PIJ1 AMPD2 AMP deaminase 2 1 QIS(1)QDVK;QIS(1)QDVK 87.29799999999999 0.012928 36610000.0 16269.9 17707.0 16534.8 16404.7 20077.4 12368.8 13912.3 13565.7 15392.2 15885.3 16322.5 True False 17921.608270732664 19199.231032721902 17656.950959829723 17417.98106122314 18667.232687269843 12268.072593662566 14441.740189602666 13295.12147141422 14745.31936181736 14882.29944699774 14314.935976852572 1.2519516887614535 1.3412027174810488 1.2334634949385195 1.2167697493993848 1.3040388526679398 0.8570120476612813 1.0088581753320545 0.9287587099874283 1.0300653377465832 1.0396343700777009 1.0 13.805233597488263 -7.247295732530958 24.964985981847754 0.9971391613189292 1.2685397629760213 0.8581601389837489 0.058831613345668866 220.99209494131443 390073.6830138714 0.008373615303429834 0.014458489253079895 5.65853840031469e-08 7.247295732530958 0.2714006016570921 QIS(ph)QDVKLEPDILLR ddPTM_A549_MK2206_60min_R1 3 QISQDVKLEPDILLR 15 1 E9PIJ1;E9PJF6;A0A590UK85;A0A590UJY6;A0A5F9UK94;H0Y360;Q01433-3;Q01433-5;Q01433-2;Q01433-4;Q01433 E9PIJ1 AMPD2 AMP deaminase 2 1 QIS(1)QDVKLEPDILLR;QIS(1)QDVKLEPDILLR;QIS(1)QDVKLEPDILLR 64.705 0.0011173 48817500.0 2225.68 2633.3 2329.45 2279.33 2469.85 2166.3 2104.08 2052.0200000000004 3170.99 3815.0299999999997 3488.1900000000005 True False 2601.320371348373 2767.323722266307 2659.8010376771335 2837.7659523230127 2106.538336790511 2395.53642812644 2486.364100347334 2342.9001190476897 2452.7658280304995 2953.2120733465936 2621.9761538535454 0.99212205554394 1.0554343593854363 1.0144260975707184 1.0823004427985812 0.8034162834374027 0.9136377631069206 0.9482786854079885 0.8935627105549016 0.9354645824774738 1.126330637678084 1.0 11.356438849369857 QIS(ph)QDVKLEPDILLR ddPTM_A549_PD325901_60min_R1 6 QISQDVKLEPDILLR 15 1 E9PIJ1;E9PJF6;A0A590UK85;A0A590UJY6;A0A5F9UK94;H0Y360;Q01433-3;Q01433-5;Q01433-2;Q01433-4;Q01433 E9PIJ1 AMPD2 AMP deaminase 2 1 QIS(1)QDVKLEPDILLR;QIS(1)QDVKLEPDILLR;QIS(1)QDVKLEPDILLR;QIS(1)QDVKLEPDILLR;QIS(1)QDVKLEPDILLR;QIS(1)QDVKLEPDILLR 118.46 2.1161999999999999e-07 195321100.0 10015.500000000002 10616.1 10156.8 8827.79 13186.7 10763.199999999999 11649.000000000002 10447.300000000001 10224.0 10931.800000000001 10953.000000000002 True False 11032.266186978592 11510.756004206192 10846.10152580003 9373.06253893427 12260.511683645356 10675.548067727585 12092.309069577386 10238.920405751704 9794.320834917731 10241.564282367339 9605.850436787641 1.148494478399142 1.1983068110370854 1.1291141369703805 0.9757660293187721 1.2763587944999775 1.1113589721159212 1.2588483600855709 1.0659046248044408 1.019620376079176 1.0661798608840605 1.0 13.229697630632316 -8.50040858285429 5.926960491283733 1.0106324300702179 1.1541764618074588 0.35461934003019413 0.07716358745708794 0.11785287630780285 14.136641598323978 0.011883748408605179 0.014070557358284486 3.159303998523056e-09 8.50040858285429 0.14354403173724095 QISDRGPVRS(ph)EDESVEAK ddPTM_A549_MK2206_60min_R1 2 QISDRGPVRSEDESVEAK 18 2 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 QIS(0.001)DRGPVRS(0.989)EDES(0.01)VEAK;QIS(0.056)DRGPVRS(0.88)EDES(0.064)VEAK 70.315 0.00039892 11478400.0 3267.5 4329.8 3735.9 3945.2000000000003 4794.5 3600.8 3425.7 3223.4 5736.6 5730.2 9454.400000000001 True False 3818.974117294856 4550.168325928928 4265.706796307287 4911.774177106757 4089.235401235745 3981.8342659824066 4048.1053470209563 3680.326821248489 4437.269259467789 4435.743840203259 7106.611551834321 0.5373832647865947 0.6402725536271169 0.6002448234568618 0.6911555727059481 0.5754128210624166 0.5602999737553738 0.5696252450967411 0.5178736440573486 0.6243860702253333 0.6241714223226861 1.0 12.794946128247572 -10.422102589871654 0.7039388468855678 1.011336803886688 0.5887491320760746 0.11992134391935338 0.11809638775349351 0.17132717593015698 0.14920577583024489 0.03994109281384258 0.010819761540890496 3.7835319884508896e-11 10.422102589871654 -0.4225876718106133 QISEET(ph)ESVDNR ddPTM_A549_MK2206_60min_R1 1 QISEETESVDNR 12 0 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 QIS(0.295)EET(0.7)ES(0.004)VDNR 64.199 0.0069816999999999995 3759800.0 298.98 206.38 123.62 301.87 369.12 218.77 286.27 296.7 304.12 301.39 317.51 True False 349.4405146408004 216.88386047974797 141.1511748600088 375.82816355145945 314.8229369703072 241.920096192227 338.2815534611001 338.75813360564183 235.23730557984578 233.3057896755543 238.66350416979537 1.4641556355939263 0.908743300464773 0.5914233738878981 1.5747198754111953 1.3191079971168476 1.0136451194486558 1.4173995921070202 1.4193964627479654 0.9856442290920523 0.9775511781205166 1.0 7.8988341597185965 QISGQYSGS(ph)PQLLK ddPTM_A549_MK2206_60min_R1 2 QISGQYSGSPQLLK 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 QISGQYS(0.021)GS(0.979)PQLLK;QISGQYS(0.169)GS(0.831)PQLLK 138.39 2.0785000000000002e-09 15876800.0 2787.3 3567.8 3234.8999999999996 3258.2 4331.0 3927.6 3308.6 3901.2 5720.9 4601.1 5515.799999999999 True False 3257.7280970576726 3749.385780694082 3693.6574628267476 4056.459146266154 3693.915637241007 4343.216025070122 3909.729792787909 4454.20704692393 4425.12528440004 3561.7083143972673 4146.07463166438 0.7857379296015967 0.9043218257720911 0.8908806017666845 0.978385462549609 0.890942871367981 1.0475489254101058 0.9429955174777946 1.074319071081423 1.067304782843149 0.8590555237949185 1.0 12.017530370661518 -5.542482128341826 0.4625934728005902 1.0340734448995954 0.6944184475159468 0.370348137703137 0.07032594987330741 1.4922635952853927 0.24854899628699845 0.01017766495782274 0.26222688835363833 2.8675953776100153e-06 5.542482128341826 -0.33965499738364857 QISGQYSGS(ph)PQLLK ddPTM_A549_PD325901_60min_R1 2 QISGQYSGSPQLLK 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 QISGQYS(0.001)GS(0.999)PQLLK;QISGQYS(0.071)GS(0.929)PQLLK 157.58 5.1526e-19 24280000.0 5635.0 6452.1 6922.1 6511.4 7828.200000000001 6937.9 7601.4 7517.299999999999 6840.5 7316.2 6943.5 True False 6207.061051732249 6995.8411106469175 7391.875331968776 6913.59438953765 7278.374237823909 6881.400042653409 7890.675436645688 7367.361554292234 6553.017573479531 6854.253883409494 6089.493518473021 1.01930661932763 1.1488379270664153 1.213873585634809 1.1353315950767737 1.195234745836302 1.1300447273288114 1.2957851769952002 1.2098479999925589 1.076118654794585 1.1255868591725247 1.0 12.572106524489323 -9.024403017602062 2.5406991770488183 1.0288564317783875 1.1716079077178336 0.2435713681818682 0.07243589692629296 0.16906697255425263 2.2159107174712718 0.01292340025558903 0.012888675243397858 9.453594773075741e-10 9.024403017602062 0.14275147593944615 QISLAPETLDS(ph)SGDVSPGPR ddPTM_A549_MK2206_60min_R1 1 QISLAPETLDSSGDVSPGPR 20 0 Q8TER5;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 QISLAPET(0.065)LDS(0.312)S(0.312)GDVS(0.312)PGPR 61.815 0.0022395 2487100.0 891.44 1085.2 973.59 853.47 1092.9 799.0 972.98 969.5 1514.2 1621.8 1841.3 True False 1041.8932783844907 1140.4320447360333 1111.659701763113 1062.5701883137244 932.135857755876 883.5496496667247 1149.757871542883 1106.9295939692277 1171.2361176805298 1255.4342536109818 1384.0543927052518 0.7527834772071507 0.8239792097382547 0.8031907615930323 0.7677228538950993 0.6734820991637023 0.6383778371164676 0.8307172590923857 0.7997731879638341 0.8462356131764803 0.9070700257358593 1.0 10.434684926006774 -9.604662932669111 0.6002245301687341 0.9907977593711849 0.7521331946137184 0.597669733594939 0.060586282875806405 0.3008225171697063 0.23621221258706568 0.030347555935853282 0.01579931348146325 2.4850610780634053e-10 9.604662932669111 -0.23866456475746645 QISLAPETLDSSGDVS(ph)PGPR ddPTM_A549_MK2206_60min_R1 1 QISLAPETLDSSGDVSPGPR 20 0 Q8TER5;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 QISLAPETLDS(0.103)S(0.103)GDVS(0.793)PGPR 99.569 2.6393e-07 1652700.0 814.26 693.99 934.85 777.97 1219.2 1066.4 929.51 742.26 1249.4 1242.5 1291.2 True False 951.6871812543247 729.311126729045 1067.4257872340975 968.5726849244002 1039.857295064474 1179.2457401809706 1098.3899352276771 847.4776280759139 966.4128948818209 961.818387046273 970.5594046928908 0.980555313412745 0.7514337846840166 1.0998046920908027 0.9979530157980188 1.0713999473257496 1.21501655074283 1.1317080952661884 0.8731847056225033 0.9957277114713221 0.9909938355093435 1.0 9.922672707951163 -5.769959858892789 24.999906622854237 1.022992701331373 0.8659945327805174 0.3038630078523874 0.09933841883722039 160.03195380756156 469554.8736287048 0.01369576136837268 0.04358647446019268 1.6984006255154032e-06 5.769959858892789 -0.1569981685508557 QIT(ph)MEELVR ddPTM_A549_MK2206_60min_R1 5 QITMEELVR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR 88.338 0.0011884 34482400.0 5198.5599999999995 7254.620000000001 6359.65 5156.65 8349.09 6072.160000000001 4457.65 6165.17 8671.03 8572.76 9030.82 True False 6075.949835410658 7623.849171012645 7261.54399934036 6420.029481490814 7120.949920972649 6714.711940826408 5267.547304243795 7039.10172754127 6707.055549789596 6636.167561959601 6788.218156047591 0.8950728594362607 1.1231002003405848 1.0697275533007267 0.9457606302430396 1.0490160683225287 0.989171500748588 0.7759837976849584 1.0369586783639486 0.9880436066737649 0.977600809138326 1.0 12.728817214832969 -7.502697774983852 24.334282945514786 0.9788201487286777 1.0212404025613555 0.07474154870942717 0.08537147371375804 1426.6902691894584 1720308.4233017024 0.012449458218174435 0.019747725000467557 3.142694930772397e-08 7.502697774983852 0.04242025383267778 QIT(ph)MEELVR ddPTM_A549_PD325901_60min_R1 6 QITMEELVR 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR 126.76 6.0241e-05 60910000.0 7778.83 9865.71 8437.22 7648.200000000001 11131.640000000001 8004.709999999999 11023.67 11556.16 11043.78 10029.5 10966.449999999999 True False 8568.531095128015 10697.128005412254 9009.820486325478 8120.61194367753 10349.792008473229 7939.522295713136 11443.181794233686 11325.663323167852 10579.648332379471 9396.23565835482 9617.646172054216 0.890917688365934 1.1122397116765084 0.9368009932102843 0.8443450505876806 1.0761252621817585 0.825516155791095 1.1898110607857346 1.177592013737892 1.1000246986752875 0.9769787212236252 1.0 13.231468135890003 -7.764632119886397 24.999975333725516 1.0700055776006059 0.9557884443659541 0.31546721590959503 0.10148952854430439 94.90375020059014 743124.2304607052 0.015586952177883888 0.022027398883782988 1.7193642013659564e-08 7.764632119886397 -0.11421713323465177 QIT(ph)PQQQEKSPVNTK ddPTM_A549_MK2206_60min_R1 1 QITPQQQEKSPVNTK 15 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 QIT(0.637)PQQQEKS(0.355)PVNT(0.008)K 45.115 0.018673 2709600.0 1274.3 1080.2 1120.6 1387.9 1673.0 1284.0 1474.4 1335.4 1796.1 1762.2 1561.6 True False 1489.3706863561847 1135.1775660927601 1279.5179303359153 1727.9355623051993 1426.9039162096994 1419.8720277497798 1742.279395057273 1524.6970394909824 1389.286217782327 1364.1177960989476 1173.8116220325417 1.2688327994037316 0.967086664321074 1.0900538947811194 1.472072289856145 1.2156157678341177 1.209625123059496 1.4842921660976462 1.2989282188660363 1.1835682929912341 1.1621266739009422 1.0 10.196985182236268 -9.93600143169507 0.9331376641449988 1.0222668831420112 1.2437637655923819 0.13215899147522492 0.14746749244916307 0.49600789452332406 0.8803457736185919 0.054967905189780945 0.029194447649218812 1.1587735361363079e-10 9.93600143169507 0.2214968824503707 QIT(ph)QNSKK ddPTM_A549_MK2206_60min_R1 1 QITQNSKK 8 1 A6NI33;B4DYY6;Q75T13-4;Q75T13-3;Q75T13-2;Q75T13 A6NI33 PGAP1 GPI inositol-deacylase 1 QIT(0.956)QNS(0.044)KK 47.261 0.023419 28684000.0 6061.2 5224.5 5466.7 4627.7 5104.0 4694.3 4106.5 4424.0 5108.7 8209.6 7396.0 True False 7084.1823778875505 5490.404734356248 6241.960262151837 5761.486707745347 4353.208361227915 5191.047710175851 4852.597894603024 5051.115547931785 3951.587606917527 6355.045658185174 5559.369080784249 1.2742781195034814 0.9875949329094963 1.122782130750581 1.0363562166900757 0.7830399993183789 0.9337476312048634 0.8728684539718449 0.9085771199093036 0.7107978530470376 1.1431235389913492 1.0 12.440705448964941 -6.596725579901428 4.857722486461504 0.8657363016364312 1.1096705126183675 0.3452609722548057 0.12611325152411107 0.13712761415702165 6.030654961454844 0.016838313003658237 0.035982803069004046 2.530896703245265e-07 6.596725579901428 0.24393421098193624 QITPQQQEKS(ph)PVNTK ddPTM_A549_PD325901_60min_R1 2 QITPQQQEKSPVNTK 15 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 QITPQQQEKS(0.992)PVNT(0.008)K;QIT(0.008)PQQQEKS(0.927)PVNT(0.065)K 65.47 0.0010378 8491800.0 3591.0 3903.1000000000004 4126.6 2991.2 4783.6 3843.3 4106.0 4128.0 4071.1000000000004 4432.4 4331.1 True False 3955.555676445523 4232.027934930639 4406.655891261663 3175.959630491911 4447.616438524115 3812.001439042053 4262.256076889414 4045.663801646647 3900.0058246316053 4152.537507561882 3798.4021571049907 1.0413735862714204 1.1141600493814334 1.160134106131685 0.8361304304103798 1.1709177318691113 1.0035802638516367 1.1221181698511766 1.0650962258114633 1.0267490548194227 1.0932327162342392 1.0 11.891176944058406 -8.959486866010847 2.384128341702146 1.0102475120942098 1.0648730978492176 0.0 0.09033446259104008 0.5543022395649829 6.248999870815358 0.015270269086206533 0.015525019746134763 1.097774488807919e-09 8.959486866010847 0.054625585755007755 QITPS(ph)QCK ddPTM_A549_MK2206_60min_R1 1 QITPSQCK 8 0 A0A087X0P0;Q02224-3;Q02224 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E 1 QIT(0.445)PS(0.555)QCK 53.756 0.024375 2100600.0 1796.0 2074.0 2048.8 1845.1 2692.6 1969.9 1665.3 1634.9 2804.7 2434.2 3141.9 True False 2099.1208920157783 2179.5577412297566 2339.3506475747135 2297.149582829686 2296.5221068656506 2178.353510486209 1967.8634540076478 1866.652081671263 2169.4399281855644 1884.3125293746773 2361.67951797134 0.888825463422278 0.9228846355503713 0.9905453427415898 0.9726762523659076 0.9724105618015187 0.9223747311647915 0.8332474575966275 0.7903917815549755 0.9186004754993568 0.7978697003703888 1.0 11.205597487668449 -10.355901340046257 1.0950623627145624 0.9932022609873347 0.9148763933688479 0.0 0.0816317352789968 0.5690481543976809 1.3411009335323651 0.027049730358853368 0.011466174911232307 4.406549570184209e-11 10.355901340046257 -0.07832586761848681 QITS(ph)PVSGINGDIR ddPTM_A549_MK2206_60min_R1 2 QITSPVSGINGDIR 14 0 A0A087WXV4;P41235-7;P41235-3;P41235-6;P41235-5;P41235-2;P41235;P41235-4 A0A087WXV4 HNF4A Hepatocyte nuclear factor 4-alpha 1 QIT(0.092)S(0.908)PVSGINGDIR;QIT(0.095)S(0.905)PVSGINGDIR 241.33 1.5421999999999998e-57 47109000.0 12471.5 13125.900000000001 12348.3 11570.3 15493.0 13280.099999999999 11847.1 12420.3 18102.8 18638.3 19355.6 True False 14576.384301099557 13793.952244748145 14099.474619995524 14405.0240194105 13214.000223452995 14685.391367383067 13999.564718653713 14180.915560573496 14002.544704231334 14427.895085138462 14549.070332615955 1.001877368646873 0.9480985334042277 0.969097976548197 0.9900992771419537 0.9082367409984944 1.009369741959492 0.9622308778911897 0.9746956497132925 0.9624357009836274 0.991671272135798 1.0 13.828639349220804 -10.823255941090352 0.864201047490692 1.001823488892993 0.9683818938559264 0.1273709052311044 0.026069140217529787 0.9380935894057061 1.1286056535691784 0.021412845701722093 0.004263174699506756 1.502256386211599e-11 10.823255941090352 -0.033441595037066674 QITS(ph)PVSGINGDIR ddPTM_A549_PD325901_60min_R1 2 QITSPVSGINGDIR 14 0 A0A087WXV4;P41235-7;P41235-3;P41235-6;P41235-5;P41235-2;P41235;P41235-4 A0A087WXV4 HNF4A Hepatocyte nuclear factor 4-alpha 1 QIT(0.104)S(0.884)PVS(0.013)GINGDIR;QIT(0.101)S(0.898)PVS(0.001)GINGDIR 205.45 6.494399999999999e-32 73804000.0 13810.8 13073.4 13876.599999999999 10318.0 13964.6 13537.900000000001 12461.400000000001 13473.400000000001 12848.2 15224.6 16192.4 True False 15212.8622490264 14175.141299101282 14818.349522774577 10955.319426121805 12983.774671254663 13427.651830876446 12935.625396139723 13204.66246732217 12308.234834819043 14263.316157753501 14200.837452080714 1.0712651489998855 0.998190518477087 1.043484201039382 0.7714558710420719 0.9142964078750352 0.9455535193742408 0.9109058138148317 0.9298509691333321 0.866725985446417 1.0043996493786804 1.0 13.793688390430004 QITT(ph)SPITVR ddPTM_A549_MK2206_60min_R1 2 QITTSPITVR 10 0 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 QIT(0.048)T(0.476)S(0.476)PITVR;QIT(0.102)T(0.449)S(0.449)PITVR 119.27 6.3399e-05 93370000.0 5663.6 5649.1 5566.2 5099.2 5957.200000000001 5219.7 5048.1 5950.3 8079.7 7728.0 8614.8 True False 6619.47721827426 5936.615060743021 6355.570858322124 6348.504228911788 5080.903771455124 5772.045189443561 5965.274426335205 6793.773247029497 6249.660850629622 5982.239432670905 6475.507403615485 1.0222329781567994 0.9167799047574893 0.9814784328365688 0.9803871470160336 0.7846340764923366 0.8913656999636572 0.9212057147837712 1.0491491745089063 0.9651229565640268 0.9238255876799443 1.0 12.660777527654194 -8.208107136568051 24.942427730215336 0.9879915462230315 0.9249575548107186 0.14924286356491312 0.06406977951745563 402.4916737477024 188237.4807458656 0.00989399066129565 0.012773077702183147 6.192882833455223e-09 8.208107136568051 -0.06303399141231292 QITT(ph)SPITVR ddPTM_A549_PD325901_60min_R1 2 QITTSPITVR 10 0 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 QIT(0.046)T(0.477)S(0.477)PITVR;QIT(0.008)T(0.77)S(0.222)PITVR 131.42 1.1787e-06 100684000.0 6867.9 7222.4 6843.5 6258.9 7779.4 6293.700000000001 6725.9 6759.299999999999 7382.3 7591.3 7541.6 True False 7565.124152119245 7831.056995015007 7307.941063308573 6645.49803800676 7233.001781473047 6242.446193869589 6981.857805053701 6624.480458931726 7072.047603639785 7111.984022460637 6614.0310101413 1.1437993170155436 1.1840066947082104 1.1049148472547679 1.004757617225745 1.0935844979230789 0.9438187066704163 1.0556131040735086 1.0015798911094316 1.069249235873888 1.075287371884986 1.0 12.69131409433871 -6.036870536818115 3.5788941753289394 1.0293867484171166 1.1627298715372598 0.6138582685410283 0.04165186697147078 0.10353679316221276 2.739595808096735 0.005500225706128769 0.01718575638519531 9.186063922311168e-07 6.036870536818115 0.13334312312014318 QITT(ph)SPITVRK ddPTM_A549_PD325901_60min_R1 2 QITTSPITVRK 11 1 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 QIT(0.069)T(0.462)S(0.462)PIT(0.007)VRK;QIT(0.068)T(0.466)S(0.466)PITVRK 71.558 0.0015119999999999999 37148000.0 4042.7000000000003 4113.0 5401.5 4033.7 5323.799999999999 6129.3 6257.2 6640.6 5966.700000000001 5438.6 5168.4 True False 4453.111927921556 4459.616944574756 5768.078271858157 4282.85248780263 4949.874654112942 6079.385012962937 6495.321170071222 6508.148023550077 5715.940348758174 5095.2058678427165 4532.719565187002 0.9824371139399705 0.9838722383856037 1.2725424965972252 0.9448747989389316 1.092031965120862 1.3412223998270065 1.4329854465203937 1.4358152826252721 1.2610399268154056 1.124094662060239 1.0 12.146161190551927 -5.740961712388945 23.960211853324783 1.1750677536334002 0.9831542893019164 0.2123921346291614 0.15729025893158075 229.57193443036547 268606.6258969407 0.02533616907446078 0.09784233386577763 1.8156757265654304e-06 5.740961712388945 -0.19191346433148382 QITVNDLPVGR ddPTM_A549_MK2206_60min_R1 2 QITVNDLPVGR 11 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;P32119 Q06830 PRDX1;PRDX2 Peroxiredoxin-1;Peroxiredoxin-2 0 ; 205.13 4.8570000000000004e-24 34926000.0 9499.9 11036.4 10176.3 9304.099999999999 11954.900000000001 9548.0 10148.5 9695.099999999999 14342.300000000001 14836.5 14910.7 False True 11103.250869744266 11598.105619724252 11619.452359876293 11583.60491767692 10196.350046560266 10558.36302255055 11992.35108568824 11069.410114998514 11093.791949946815 11484.924345603244 11207.961675615152 0.9906574621772037 1.0348095358817944 1.0367141409089942 1.0335157500474903 0.9097416944906387 0.9420413209943503 1.0699850189334303 0.9876381125643854 0.9898135156977979 1.0247112434895875 1.0 13.452236307303187 QITVNDLPVGR ddPTM_A549_PD325901_60min_R1 2 QITVNDLPVGR 11 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;P32119 Q06830 PRDX1;PRDX2 Peroxiredoxin-1;Peroxiredoxin-2 0 ; 119.6 3.754e-05 55751000.0 6613.6 7325.5 7461.3 7323.1 8797.8 6837.299999999999 7915.4 8210.1 7687.3 7601.6 8862.3 False True 7285.0078033250065 7942.84559384449 7967.668686441776 7775.431255033199 8179.872878762319 6781.6192956995865 8216.624878473078 8046.343114801146 7364.229514305855 7121.633678702825 7772.293282748387 0.9373048003084271 1.0219436278189176 1.0251374203965065 1.0004037382752626 1.0524400689972169 0.8725377503126741 1.0571686604661383 1.0352598418617383 0.9474976363349177 0.9162847334274189 1.0 12.924124625830267 QIVDT(ph)PPHVAAGLK ddPTM_A549_MK2206_60min_R1 2 QIVDTPPHVAAGLK 14 0 Q96I25;Q5W012;Q5W011;Q5W010 Q96I25 RBM17 Splicing factor 45 1 QIVDT(1)PPHVAAGLK;QIVDT(1)PPHVAAGLK 87.287 7.1905e-05 8860200.0 2769.5 3044.3999999999996 2764.3999999999996 2981.8 3777.1000000000004 2557.8 2484.8999999999996 2608.5 4019.1 4062.2 4279.6 True False 3236.9238922258905 3199.346956316235 3156.433487971267 3712.3411338580872 3221.493593494116 2828.4646982697736 2936.3741649334083 2978.262863196214 3108.78026718387 3144.546198679572 3216.8572090487105 1.0062379775890375 0.9945567205522144 0.9812165361560105 1.1540273293497854 1.0014412776645365 0.8792633662176779 0.9128083636021113 0.9258299854959824 0.9664029408701044 0.9775212247016329 1.0 11.6514361832361 -7.001937341426603 24.999921794953135 0.9653660200234689 1.0337098398416413 0.3452578237180439 0.05444507175361511 89.34822660673363 1153007.7752784397 0.008499169113194665 0.015888323518387402 9.955490415179307e-08 7.001937341426603 0.06834381981817239 QIVGT(ph)PVNSEDSDTR ddPTM_A549_MK2206_60min_R1 2 QIVGTPVNSEDSDTR 15 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QIVGT(0.931)PVNS(0.069)EDS(0.001)DTR;QIVGT(0.949)PVNS(0.049)EDS(0.002)DTR 240.34 1.5158999999999998e-64 54024000.0 7242.0 7668.2 7265.7 6107.1 9379.900000000001 7887.8 7315.5 7153.700000000001 10926.099999999999 10449.7 10675.900000000001 True False 8464.272550099264 8058.478626469638 8296.0855135121 7603.3397741581375 8000.129135478395 8722.48176050212 8644.631656634214 8167.758882287429 8451.355795396408 8089.105512368156 8024.779390149345 1.0547670083603058 1.0041993972272507 1.0338085460262985 0.9474827162839471 0.9969282327310819 1.0869434954447752 1.077242281232772 1.0178172489468802 1.053157399662687 1.0080159365250307 1.0 12.970246016197676 -5.22546504275656 21.32442459643474 1.0251612751788428 1.054767468126889 0.05300262477237616 0.037706381698692754 6485.365024376285 3843815.9831904555 0.005414287912212495 1.0684696408827583 5.950246495719978e-06 5.22546504275656 0.029606192948046228 QIVGT(ph)PVNSEDSDTR ddPTM_A549_PD325901_60min_R1 2 QIVGTPVNSEDSDTR 15 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QIVGT(0.999)PVNS(0.001)EDSDTR;QIVGT(0.999)PVNS(0.001)EDSDTR 272.43 4.510499999999999e-91 61531000.0 10656.8 11907.099999999999 11858.5 10192.5 13239.8 11793.3 11429.099999999999 11759.2 11213.0 12298.2 12084.7 True False 11738.670490878485 12910.553104971077 12663.289120953423 10822.067576152987 12309.882122830417 11697.259274856147 11864.040654743498 11524.653531086054 10741.756604257875 11521.689553176055 10598.358511225013 1.1075932634705399 1.2181653499735035 1.1948349461420262 1.0211078974815806 1.161489499510012 1.103685939899774 1.119422469260496 1.0873998571458001 1.013530217238923 1.087120193280225 1.0 13.371553214989012 -8.435991972824388 0.8280682362265924 1.0003386207251574 1.1449154109964566 0.34080334416357727 0.05538813638956787 0.2679965703063068 0.3669008312964945 0.010895072114135132 0.013364817876115181 3.664443476695253e-09 8.435991972824388 0.1445767902712991 QIVSGSR ddPTM_A549_PD325901_60min_R1 2 QIVSGSR 7 0 H0YAF8;H0YAM7;J3KPE3;H0Y8W2;P63244;D6RAU2;E9PD14;D6RFX4;D6RFZ9;D6RHH4;D6R9Z1;D6R9L0 H0YAF8 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 104.44 0.027962 13764600.0 5751.6 6251.299999999999 6620.4 5302.9 6976.2 5447.5 7708.200000000001 6582.5 6533.3 8082.200000000001 7181.1 False True 6335.498197895866 6778.118989939254 7069.700155699293 5630.448089240291 6486.21577858348 5403.137366112868 8001.539769088891 6451.206873628649 6258.728121162754 7571.8885126831165 6297.870224743516 1.0059747139603663 1.0762557417123177 1.1225541180450744 0.8940241523426428 1.0299062297441408 0.8579308835048144 1.2705151874441425 1.0243473814818689 0.9937848666003029 1.2022935123264604 1.0 12.620648313960123 -11.77694324359383 0.06897542879001686 0.9063762415449799 1.0837865261890924 0.0 0.1217984922420322 404.8004646139129 4.434044686048083 9.031323794431131 3.400472477041931 1.6713090174895616e-12 11.77694324359383 0.17741028464411257 QKAEADKNDK ddPTM_A549_PD325901_60min_R1 1 QKAEADKNDK 10 2 P08238;Q58FF7;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha 0 39.785 0.035433 3582600.0 2265.4 2329.1 2222.2 1899.6 2181.0 1667.2 1608.8 1573.4 1855.2 2502.0 2557.3 False True 2495.381740300664 2525.381430977159 2373.011855174153 2016.9339776953843 2027.8140840415356 1653.6228759583983 1670.0237643691403 1542.0173026915786 1777.2323956317837 2344.02329300601 2242.76831206035 1.1126346519530799 1.1260108399949627 1.0580726695724325 0.8993055443352952 0.9041567393016429 0.7373132869169507 0.7446260745653883 0.6875508693428003 0.7924279944900348 1.0451473210144657 1.0 11.131064875970807 -6.229112629334067 2.0621284312467636 0.8588173139835824 1.1221749501466758 0.5377563527306705 0.10367393138256861 0.23304847602936493 1.8961696445506213 0.017073373052997616 0.05657484633776281 5.900480380805717e-07 6.229112629334067 0.2633576361630934 QKAS(ph)IHEAWTDGK ddPTM_A549_MK2206_60min_R1 2 QKASIHEAWTDGK 13 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;O43707;O43707-2 P12814-4;O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 1 QKAS(1)IHEAWTDGK;QKAS(1)IHEAWTDGK 88.133 8.0924e-05 5517800.0 1644.14 1476.72 1340.0500000000002 1157.87 2150.41 1646.73 1556.6399999999999 1537.9099999999999 2406.4 2243.7 2550.6000000000004 True False 1921.6306366363167 1551.8787404189031 1530.0892401808346 1441.548201978759 1834.087537630901 1820.9858755890934 1839.4613385254715 1755.9134521518454 1861.3542422311637 1736.8466116826748 1917.215627021133 1.0023028237163096 0.8094440283851271 0.7980788486260177 0.7518967515503509 0.9566412414865446 0.9498075489914735 0.959444160896773 0.9158664405839888 0.9708632748436524 0.9059213722252484 1.0 10.904796889033713 -6.883974698513578 7.384880121775105 0.9746352184201885 0.8355718418979927 0.371735333898248 0.06510152936802747 0.13418625658776206 8.191902398546327 0.008807643172342484 0.016720487155265654 1.3062469863303164e-07 6.883974698513578 -0.1390633765221958 QKAS(ph)IHEAWTDGK ddPTM_A549_PD325901_60min_R1 2 QKASIHEAWTDGK 13 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;O43707;O43707-2 P12814-4;O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 1 QKAS(1)IHEAWTDGK;QKAS(1)IHEAWTDGK 90.75399999999999 7.7529e-05 7400400.0 1815.25 1666.25 1745.67 1806.54 2086.33 1824.17 1648.92 1691.79 2188.5 2070.22 2442.18 True False 1999.5328436835791 1806.6707352048845 1864.1416637664774 1918.1258728499786 1939.7933782477662 1809.3145643216362 1711.670552923647 1658.0459212664202 2096.5249557137563 1939.5059558940447 2141.807342254546 0.9335726907999096 0.8435262591373489 0.8703591714295894 0.8955641504295565 0.9056806090719008 0.8447606507955494 0.799171110844115 0.7741340168911269 0.9788578619339666 0.9055464128965255 1.0 11.064612998702469 -8.869880863499954 8.106907746003298 0.9906440340220974 0.8587706343882041 0.4274582742976649 0.05026543923907105 0.10924166871798116 7.534525329677298 0.007850155908826203 0.008341632711830261 1.349332983452875e-09 8.869880863499954 -0.13187339963389333 QKDFDIAEQNES(ph)S(ph)DEESLRK ddPTM_A549_PD325901_60min_R1 1 QKDFDIAEQNESSDEESLRK 20 2 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 2 QKDFDIAEQNES(0.858)S(0.858)DEES(0.285)LRK 44.105 0.015447 7596000.0 1884.1 2554.5 2311.4 2203.0 3172.2 2534.4 2395.5 2325.7 3097.8 2797.2 3008.1 True False 2075.3724449988886 2769.77668001853 2468.265503577328 2339.07430662399 2949.395615495899 2513.7606866776414 2486.6620633678976 2279.3120890236437 2967.610238889683 2620.5843146268603 2638.1227699169976 0.7866853160378829 1.0499043909566326 0.9356143435489116 0.8866434622743443 1.117990280485959 0.9528596300909571 0.9425876959646327 0.8639901505021151 1.1248946685612558 0.9933519184587876 1.0 11.365295989292889 -8.767847104579474 24.998999416823757 1.0589780341833304 0.9498141864761713 0.17692212161690246 0.089778489503522 160.8994603294801 627729.3548756673 0.01536636253772739 0.016550194238382256 1.7066831290946982e-09 8.767847104579474 -0.10916384770715903 QKDFDIAEQNES(ph)SDEESLRK ddPTM_A549_MK2206_60min_R1 2 QKDFDIAEQNESSDEESLRK 20 2 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 QKDFDIAEQNES(0.494)S(0.494)DEES(0.012)LRK;QKDFDIAEQNES(0.884)S(0.114)DEES(0.002)LRK 91.389 7.209399999999999e-07 15259600.0 3968.6000000000004 4808.9 3957.6000000000004 3702.5 6022.7 4686.2 4136.8 4076.2 6228.4 6822.5 7756.0 True False 4638.402657045559 5053.652469527378 4518.847189985201 4609.612666211543 5136.768808222447 5182.090573552195 4888.403012393471 4654.013832838951 4817.677344711008 5281.292511567965 5829.971145289702 0.7956133129051822 0.8668400483612091 0.7751062702319175 0.7906750396073329 0.8810967807915611 0.8888707069740887 0.8384952327496566 0.7982910578552589 0.8263638403430913 0.9058865610055311 1.0 12.509273027667538 -10.661208870054816 0.6873609597330901 1.0148591048789866 0.8284557698212869 0.48435001811713563 0.045317224921755744 0.3579069902666373 0.26446231510303575 0.038743252880372475 0.007697935835084306 2.181680399770617e-11 10.661208870054816 -0.18640333505769968 QKDFDIAEQNES(ph)SDEESLRK ddPTM_A549_PD325901_60min_R1 2 QKDFDIAEQNESSDEESLRK 20 2 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 QKDFDIAEQNES(0.5)S(0.5)DEES(0.001)LRK;QKDFDIAEQNES(0.5)S(0.5)DEESLRK 102.69 3.2937e-10 15916500.0 5915.6 7638.6 7291.0 6192.8 7590.799999999999 6260.1 7505.200000000001 7631.2 8657.4 8482.0 9290.099999999999 True False 6516.147357165448 8282.331629669028 7785.81110434468 6575.315191130757 7057.648394838375 6209.119821129541 7790.814493003023 7478.989729439416 8293.559584919474 7946.445072452825 8147.47659479602 0.7997749096115796 1.0165517548045664 0.9556101221963197 0.8070370150348835 0.8662373328382749 0.7620911516450932 0.9562242250538276 0.9179516679086157 1.0179298447100493 0.9753259159441343 1.0 12.99213758721105 -8.4733139291289 1.8545750854583851 1.0086480116469567 0.878597342352298 0.3338824811486111 0.07208635453418273 0.25370602949617527 1.7070067155039927 0.012781684751501064 0.01528001654327629 3.362684103755627e-09 8.4733139291289 -0.1300506692946587 QKDFLDGVYAFEYYPST(ph)PGR ddPTM_A549_MK2206_60min_R1 2 QKDFLDGVYAFEYYPSTPGR 20 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 QKDFLDGVYAFEYYPS(0.026)T(0.974)PGR;QKDFLDGVYAFEYYPS(0.028)T(0.972)PGR 240.08 9.140599999999999e-86 66048000.0 29651.0 34625.0 35502.0 32713.0 51193.0 41830.0 37314.0 39737.0 59022.0 42148.0 43327.0 True False 34655.36390265025 36387.26460466748 40536.71743957313 40727.68646854237 43662.57751495706 46256.42283549325 44093.470799760646 45369.8414394587 45653.611238766505 32626.737526942725 32567.71013563266 1.0641019512370773 1.117280412197473 1.244690439418444 1.250554193061974 1.3406707850542245 1.4203154794381332 1.353901475299534 1.3930927673609788 1.4018059927650985 1.0018124513840314 1.0 14.99115466569091 -4.252385643791949 12.517045741015902 1.2339214679941433 1.2245689888685918 0.0 0.15535423854832062 0.0 0.0 0.023799591833586597 0.0 5.592607698778288e-05 4.252385643791949 -0.009352479125551483 QKDFLDGVYAFEYYPST(ph)PGR ddPTM_A549_PD325901_60min_R1 2 QKDFLDGVYAFEYYPSTPGR 20 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 QKDFLDGVYAFEYYPS(0.02)T(0.98)PGR;QKDFLDGVYAFEYYPS(0.053)T(0.947)PGR 239.47 9.836099999999999e-86 109060000.0 30356.0 32480.0 36784.0 34239.0 42777.0 39224.0 42397.0 47732.0 39864.0 41555.0 38567.0 True False 33437.7187730939 35217.20358856991 39280.383440161124 36353.865267589135 39772.4910926386 38904.57274867573 44010.44103552857 46779.947814970415 38188.65471079424 38931.21020817932 33823.50349635616 0.9885941820514298 1.041205077775692 1.1613339654300696 1.0748107531647504 1.1758832463030722 1.1502230321251894 1.3011792536592153 1.3830603863969935 1.1290567434833692 1.1510105750095763 1.0 15.045738483857786 -4.3151476937099185 16.35613384929215 1.109402931534865 1.104461905449416 0.0 0.1186967470014578 0.0 0.0 0.017574322411927128 0.0 4.840077395304752e-05 4.3151476937099185 -0.004941026085448996 QKDFLDGVYAFEYYPSTPGR ddPTM_A549_MK2206_60min_R1 1 QKDFLDGVYAFEYYPSTPGR 20 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 103.27 1.5357000000000002e-09 1666100.0 1428.0 1855.1 1751.0 1669.9 2199.9 1971.6 1777.1 1597.2 2216.8 2330.9 2034.3 False True 1669.011488751966 1949.5166662272532 1999.3181295896727 2079.025574964659 1876.297624189909 2180.23340335784 2099.976066845009 1823.6079912198556 1714.698339502178 1804.3480711196437 1529.1271661762307 1.0914798492041267 1.2749212160701178 1.3074897718214058 1.3596158782290921 1.2270383168208439 1.4258025438196746 1.3733168262887223 1.192580991010715 1.1213575806059286 1.1799856225376182 1.0 10.578492674606728 -8.870168799991152 1.4096616974658864 1.041609393556719 1.2976390297581433 0.4145501857828181 0.09552560510685294 0.18278062280530508 0.7223624384505802 0.018261878981915412 0.01870883190422652 1.3484386745114069e-09 8.870168799991152 0.25602963620142427 QKDFLDGVYAFEYYPSTPGR ddPTM_A549_PD325901_60min_R1 1 QKDFLDGVYAFEYYPSTPGR 20 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 108.25 8.000299999999999e-10 1677400.0 3040.5 3690.7 3342.3 2966.6 4102.3 3316.2 3206.4 3094.4 3311.5 3411.0 3767.6 False True 3349.169321702204 4001.728241512778 3569.128576882625 3149.8401443625658 3814.16860016671 3289.1939666826074 3328.4213066094044 3032.6797644901626 3172.329171051451 3195.628877875099 3304.209084784178 1.0136069588105265 1.2111001873158278 1.0801763705930103 0.9532811222109163 1.1543363335361816 0.9954557602995783 1.0073276905921975 0.9178232026706776 0.9600872976410508 0.9671388207819267 1.0 11.69008926561958 -7.428173875230692 6.985921482451652 0.9777147147448306 1.0822638794287236 0.3970703810881354 0.0664329608439027 0.21252996845867397 13.594355828164545 0.00958196836584967 0.01533402153498447 3.73100752334277e-08 7.428173875230692 0.10454916468389297 QKDS(ph)DSES(ph)EER ddPTM_A549_PD325901_60min_R1 3 QKDSDSESEER 11 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 QKDS(0.999)DS(0.102)ES(0.899)EER;QKDS(1)DS(0.306)ES(0.694)EER;QKDS(0.792)DS(0.523)ES(0.685)EER 117.08 5.702e-05 60663000.0 17140.3 17312.3 18409.9 15084.5 21545.9 13031.099999999999 15076.699999999999 16529.0 17612.399999999998 19512.0 17915.3 True False 18880.370637978038 18771.26827852213 19659.306521722 16016.235305614882 20032.590313319826 12924.97904204743 15650.452068786795 16199.31612825034 16872.21207677082 18280.00899006126 15711.831674443682 1.201665791054024 1.1947218292221664 1.2512421803562943 1.019374165754737 1.2750003136747028 0.8226271328422358 0.9960934150181405 1.0310265832722472 1.0738539227233812 1.1634549916796069 1.0 13.939563758373618 -7.2353983549167085 24.995341992866088 1.0188693971072733 1.1828528285512085 0.4418159302075637 0.09716447875321528 523.8755818048337 502839.52065615775 0.012510957296918127 0.021665030547061308 5.815695306673099e-08 7.2353983549167085 0.16398343144393523 QKDSDS(ph)ES(ph)EER ddPTM_A549_PD325901_60min_R1 1 QKDSDSESEER 11 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 QKDS(0.636)DS(0.695)ES(0.668)EER 52.008 0.0068466 22123000.0 4524.6 4672.6 4333.1 4199.8 5405.1 3841.8 4238.6 4715.2 5066.4 4801.7 4903.5 True False 4983.934061165525 5066.37640049113 4627.170223047034 4459.212107562158 5025.46442258272 3810.5136545447317 4399.902242450917 4621.151636997157 4853.476826880587 4498.5198425367535 4300.400585847549 1.1589464659565571 1.1781173170621306 1.0759858600789123 1.0369294716955557 1.1686037898704895 0.8860834190854181 1.0231377646377464 1.0745863192850422 1.1286104003550717 1.0460699538878324 1.0 12.070255338964698 -5.832924401810499 4.440467118227219 1.0543128797059023 1.1691443279181126 0.31172711864836034 0.06868564331143578 0.2025424426255485 7.540921822541999 0.010211034784507715 0.03529717221051514 1.4691819977541525e-06 5.832924401810499 0.11483144821221036 QKEDVEVVGGS(ph)DGEGAIGLSSDPK ddPTM_A549_MK2206_60min_R1 2 QKEDVEVVGGSDGEGAIGLSSDPK 24 1 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 1 QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK 188.48 5.0606e-51 308320000.0 6219.7 6441.0 6321.299999999999 6178.5 8194.3 6607.299999999999 6783.3 6479.799999999999 9026.099999999999 8650.6 8039.7 True False 7269.433302934601 6768.819388264638 7217.755392675726 7692.232777363401 6988.929324923573 7306.480100429219 8015.7378055425925 7398.331493555232 6981.70276171987 6696.423451897372 6043.220605568026 1.2029071545455055 1.1200682268702997 1.1943557688470816 1.2728697625693208 1.1564908483539724 1.209037461531235 1.3264016538064411 1.2242365414790006 1.155295035115408 1.108088532417219 1.0 12.561101892718174 -9.9368287434762 0.777750623922487 1.0123456982894445 1.211115645012871 0.4729618304571366 0.060306170004197364 0.2650055280366889 0.32750791360938875 0.025633439364584235 0.012041178674751237 1.1565682249743338e-10 9.9368287434762 0.19876994672342652 QKEDVEVVGGS(ph)DGEGAIGLSSDPK ddPTM_A549_PD325901_60min_R1 4 QKEDVEVVGGSDGEGAIGLSSDPK 24 1 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 1 QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK 210.68 1.7989999999999998e-74 554560000.0 16083.5 16849.8 17766.5 14012.9 18867.1 14952.599999999999 17413.3 17501.5 18059.7 18163.300000000003 17083.2 True False 17716.285079953086 18269.791780378244 18972.2415286435 14878.44500739505 17541.93998396151 14830.830983118729 18075.97266042338 17152.41885283885 17300.713613298474 17016.46613823183 14982.07469932718 1.1824987817440729 1.2194433779721248 1.2663293909150988 0.9930830880227299 1.1708618690006458 0.9899050218849034 1.2065066436516394 1.144862724093155 1.1547608699398235 1.1357883657459011 1.0 13.870949799819854 -14.999999999993086 0.21511789779908735 0.2419061994907313 1.1697656697990284 0.02018324393719595 0.0909669725231663 40.66780507147477 0.4953162289480811 13.026197018785263 0.05769754088514805 1.000000000015919e-15 14.999999999993086 0.9278594703082971 QKEEEEATAS(ph)ERNDADEKHPEHAEQNIR ddPTM_A549_PD325901_60min_R1 1 QKEEEEATASERNDADEKHPEHAEQNIR 28 3 A0A0A0MRK1;Q5T3I0;F8W895;E9PAV9;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 QKEEEEAT(0.154)AS(0.846)ERNDADEKHPEHAEQNIR 44.107 0.010251 11276000.0 1229.5 1132.3 1189.1 1132.2 1100.1 1275.4 845.47 858.91 1133.2 1163.0 1638.0 True False 1354.3179348899378 1227.7228948071952 1269.7994766391794 1202.133422587236 1022.8327711389697 1265.013565257523 877.6448235089359 841.7783662481403 1085.5755448091516 1089.5679815211781 1436.5363841375101 0.9427661908494326 0.8546410020406927 0.8839313021657723 0.836827689059189 0.7120131327220603 0.8805997392241696 0.6109450712143778 0.5859777556233218 0.7556895577419893 0.7584687680398361 1.0 10.488378818117283 -10.6412650186653 1.0498317394318086 0.9930191975583783 0.7822985907417214 0.0 0.12793288615255632 0.4600694388884944 0.9448953126540844 0.06613297958065344 0.02027398102557207 2.2842044923917452e-11 10.6412650186653 -0.21072060681665694 QKEENNTDLPYLEESTLTTAALS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 QKEENNTDLPYLEESTLTTAALSPSK 26 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 QKEENNTDLPYLEES(0.001)T(0.001)LT(0.001)T(0.002)AALS(0.964)PS(0.032)K;QKEENNTDLPYLEESTLTT(0.001)AALS(0.958)PS(0.04)K 103.5 1.4666e-12 10723800.0 1305.85 1222.2199999999998 915.13 959.16 1514.9 1147.92 974.9300000000001 1487.01 1656.5900000000001 1769.24 1246.96 True False 1526.2455550327427 1284.4257774762941 1044.9091947066802 1194.1542430583281 1292.0602167758948 1269.3921324723738 1152.062161301674 1697.7982212771342 1281.3750100306352 1369.5674552094554 937.3054176547762 1.628333226592831 1.3703385825828733 1.1148011896924042 1.2740289563739118 1.3784836750530554 1.3542993655669984 1.229121415071129 1.8113607254348112 1.3670837550867385 1.4611752257191026 1.0 9.872375411341336 -10.416986854356852 0.9480389379430894 1.0168028965371663 1.38018891743442 0.0 0.2227156173591126 0.43017922076304516 0.7383583827628267 0.0943552372304933 0.033729930968420904 3.8283633119978786e-11 10.416986854356852 0.3633860208972537 QKEENNTDLPYLEESTLTTAALS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 QKEENNTDLPYLEESTLTTAALSPSK 26 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 QKEENNTDLPYLEESTLTT(0.012)AALS(0.967)PS(0.021)K;QKEENNTDLPYLEESTLTT(0.003)AALS(0.978)PS(0.018)K 213.15 2.1708999999999997e-81 36216000.0 4360.5 3610.7 4239.799999999999 3583.0 4674.4 4263.3 4923.4 4438.0 4074.6 4891.4 4411.5 True False 4803.174749969564 3914.986360752752 4527.538323988556 3804.3137724165936 4346.086269804566 4228.581098292612 5110.762681187855 4349.480608456352 3903.3587318031855 4582.556169228451 3868.9134668025818 1.241478981420355 1.0119084839569303 1.170235096452102 0.9833028846625056 1.123335093197713 1.0929634727104076 1.3209813879377317 1.1242124296077702 1.0089030848831755 1.1844555864454758 1.0 11.917712746084495 -8.760220459497464 6.4418037740352645 1.0039889956178178 1.1305139276438496 0.0 0.10443030389353805 0.13211301196343936 23.407147622803972 0.014759663944069986 0.01620495333434415 1.7369188984228889e-09 8.760220459497464 0.12652493202603177 QKETS(ph)PR ddPTM_A549_MK2206_60min_R1 2 QKETSPR 7 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QKET(0.128)S(0.872)PR;QKET(0.034)S(0.966)PR 60.961000000000006 0.0079163 318060000.0 18122.3 14115.300000000001 10188.8 8150.7 2329.7 696.04 737.27 840.26 1581.54 21013.7 21402.5 True False 21180.901192303772 14833.708478679066 11633.725047837383 10147.621865898831 1987.0042161349274 769.6944908060409 871.2224156225417 959.3694281883269 1223.323715200412 16266.690575351524 16087.66857104987 1.3165923389557697 0.92205457945427 0.7231454947283374 0.6307701965068891 0.12351101139108418 0.04784375606737224 0.05415467205672837 0.05963383842421607 0.07604108139086177 1.0111279023129436 1.0 13.973667645033098 -11.009225718386023 1.3339998181331119 0.995322492935222 0.38656243039462546 0.21349437770788315 0.4074680416191105 0.5759207078466054 1.8474570816640317 0.30914935823297207 0.07254501693994785 9.789810416760744e-12 11.009225718386023 -0.6087600625405966 QKETS(ph)PR ddPTM_A549_PD325901_60min_R1 1 QKETSPR 7 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QKET(0.151)S(0.849)PR 58.577 0.0090355 337390000.0 5325.2 6605.6 6152.9 4186.0 6158.0 3800.6 3165.7 4087.2 5470.5 5972.0 6930.7 True False 5865.810383794955 7162.277094355215 6570.472794393411 4444.559712904231 5725.4833239467125 3769.649173684915 3286.1724458375093 4005.677589653625 5240.593909176197 5594.926900812105 6078.26783732713 0.9650463817623407 1.1783418049417134 1.0809778328693598 0.7312214321339763 0.9419596959492408 0.6201847754281569 0.5406429156768744 0.6590163014953764 0.8621854201608704 0.9204804807141288 1.0 12.569444532913215 -6.237423432427854 21.929741202466918 0.8528610252588772 1.0851442897105077 0.3586459212539065 0.1541442068527459 188.998378987316 172577.9754909069 0.02548464910324016 0.06735143965224402 5.78864035021973e-07 6.237423432427854 0.2322832644516305 QKFGT(ph)MPLLPIR ddPTM_A549_PD325901_60min_R1 1 QKFGTMPLLPIR 12 1 G5E9Y3;Q8WWN8;Q8WWN8-2 G5E9Y3 ARAP3 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 1 QKFGT(1)MPLLPIR 45.434 0.033117 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QKFNDS(ph)EGDDTEET(ph)EDYR ddPTM_A549_PD325901_60min_R1 1 QKFNDSEGDDTEETEDYR 18 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 QKFNDS(0.994)EGDDT(0.22)EET(0.786)EDY(0.001)R 142.23 6.321899999999999e-17 35051000.0 8985.7 8853.2 9121.0 8652.7 10352.0 8932.8 8569.1 9214.2 10879.0 10445.0 9190.0 True False 9897.921649077283 9599.2902343081 9740.005909028641 9187.157627292512 9624.911232461249 8860.054238460401 8895.201789691444 9030.415552599941 10421.793462741583 9785.500917445153 8059.688260209841 1.2280774801108227 1.1910250030015646 1.2084841987145358 1.1398899474374107 1.1942039098433634 1.0993048307093856 1.1036657377440364 1.120442287722531 1.2930764970393833 1.214128959026311 1.0 12.976508322652672 -11.063068019318962 1.379869883309194 1.0001929951331936 1.1852482258094799 0.0 0.08342407993449694 0.27823100862075867 0.9468645232629014 0.04735187174639799 0.010541117176917391 8.648324578750578e-12 11.063068019318962 0.18505523067628626 QKFNDS(ph)EGDDTEETEDYR ddPTM_A549_MK2206_60min_R1 4 QKFNDSEGDDTEETEDYR 18 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 QKFNDS(1)EGDDTEETEDYR;QKFNDS(0.991)EGDDT(0.009)EETEDYR;QKFNDS(0.923)EGDDT(0.077)EETEDYR;QKFNDS(0.942)EGDDT(0.058)EETEDYR 229.2 7.994999999999998e-65 1801423000.0 24002.5 25893.5 23450.5 23645.1 32198.2 23662.800000000003 24063.399999999998 23191.8 37803.4 39738.4 38757.2 True False 28053.53519521646 27211.36854991932 26776.133522525768 29438.15056146888 27461.887432697615 26166.781789904595 28435.408298305203 26479.30867190874 29240.990259624963 30761.467840482594 29132.717595696486 0.9629563429180584 0.9340484100233413 0.9191086768534483 1.010484190661894 0.9426476380890162 0.8981922714196076 0.9760643923760037 0.9089199654968093 1.0037165315447423 1.0559079405975744 1.0 14.830352666642632 -8.784992565410574 24.977923146220053 1.0017550413861194 0.9445937088718355 0.47448394521964243 0.03411051397492549 146.619980640865 155488.37571806094 0.004910273326826908 0.005228758170831075 1.6406178583267708e-09 8.784992565410574 -0.0571613325142839 QKFNDS(ph)EGDDTEETEDYR ddPTM_A549_PD325901_60min_R1 2 QKFNDSEGDDTEETEDYR 18 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR 293.28 9.8032e-134 1303500000.0 18267.0 20919.3 22142.4 19555.6 22230.9 18267.8 21002.2 21527.1 20153.9 22632.3 23305.2 True False 20121.45239254535 22682.24282728974 23645.116417067842 20763.504998010027 20669.478276441536 18119.033093469796 21801.45021384483 21097.725102816737 19306.90167007516 21203.29271554753 20438.808143834864 0.9844728836898818 1.1097634787540969 1.1568735442237674 1.0158862910151198 1.011285889616624 0.8865014518439618 1.0666693507968072 1.032238521656686 0.9446197417288674 1.037403578835553 1.0 14.31902344984101 -6.505100012708909 4.100312616691011 0.9809249677425064 1.0871788492470196 0.2518132570040281 0.060952358234917854 0.16606788531056227 6.382248752443923 0.008233446471914247 0.01900136478500674 3.125359552154865e-07 6.505100012708909 0.1062538815045132 QKFNDSEGDDT(ph)EET(ph)EDYR ddPTM_A549_PD325901_60min_R1 1 QKFNDSEGDDTEETEDYR 18 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 2 QKFNDS(0.279)EGDDT(0.969)EET(0.752)EDYR 108.96 8.7605e-10 36341000.0 6398.4 6639.9 6764.8 6201.5 7578.9 5881.5 5770.3 7229.6 7525.5 7142.4 6792.6 True False 7047.960857746874 7199.467675731074 7223.9000080470305 6584.55257037162 7046.584209785598 5833.603014005108 5989.891924129317 7085.399956488519 7209.229405631193 6691.427645070391 5957.153261839102 1.1831088689450666 1.2085416237064284 1.2126429672915375 1.1053186448217762 1.182877777364782 0.9792601864676801 1.0054956891070665 1.1893935987641693 1.2101802805398274 1.1232592735081997 1.0 12.540407360958762 -10.974475126050061 1.2411239150759144 0.9999218731451259 1.145652126678067 0.05264734460605536 0.08519082390439665 0.4882257053868168 1.3365791464550936 0.0601206323030904 0.013837422605321373 1.0605346781057745e-11 10.974475126050061 0.1457302535329411 QKGADFLVTEVENGGSLGSK ddPTM_A549_PD325901_60min_R1 2 QKGADFLVTEVENGGSLGSK 20 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 155.01 1.1525e-26 6279400.0 5457.8 5243.9 5450.4 5118.1 6488.0 6169.1 6517.2 6944.1 6589.0 6132.0 6439.4 False True 6011.871838179999 5685.821856468648 5820.296919917739 5434.233412951543 6032.305262384909 6118.860894958586 6765.215612348677 6805.594477958936 6312.087243864716 5744.824473506333 5647.394622719834 1.0645390024621 1.006804418022112 1.0306162945479864 0.9622549469253079 1.0681572061772617 1.0834838547216115 1.1979356967780819 1.205085695725882 1.1176989860901132 1.0172521768524077 1.0 12.46336973063496 -6.9747985306620155 21.9684811127196 1.0826552045101367 1.0162796404667054 0.2545012131734248 0.06477931926552605 92.97504179139966 81045.3453726927 0.01136604207208676 0.0214783362885175 1.0597452272873501e-07 6.9747985306620155 -0.06637556404343137 QKGDGRPET(ph)PK ddPTM_A549_MK2206_60min_R1 1 QKGDGRPETPK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKGDGRPET(1)PK 45.115 0.016838 3945000.0 1257.4 1288.3 1176.5 984.3 2038.4 1557.7 1608.2 997.34 2389.6 2433.3 1565.7 True False 1469.6183795215145 1353.868967225794 1343.3453908979163 1225.4535441869057 1738.5540602521523 1722.5347800824236 1900.3891231220198 1138.7159992256522 1848.359415407075 1883.6158399997548 1176.8934788782983 1.2487267589605588 1.150375111701844 1.1414332860253962 1.041261223874645 1.4772399469059638 1.4636284515096287 1.6147503212723109 0.9675608027932714 1.5705409610806522 1.6004981536604623 1.0 10.200768032015057 -6.7457352169903455 24.892717666511924 1.3054849297917672 1.145514145582306 0.15948098899358243 0.220849068080476 490.28861159666457 777153.3939283559 0.03572245668832325 0.07416201595159194 1.7958281833749456e-07 6.7457352169903455 -0.15997078420946131 QKGDGRPET(ph)PK ddPTM_A549_PD325901_60min_R1 1 QKGDGRPETPK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKGDGRPET(1)PK 41.621 0.030074 5210100.0 2445.1 2449.4 2528.9 1861.5 2891.0 2176.9 1835.8 2327.5 2353.4 2467.7 2932.0 True False 2693.3247520125146 2655.819534170047 2700.5263615110766 1976.4806272267626 2687.946133408566 2159.172048148896 1905.6623735883068 2281.0761866115727 2254.4947821689534 2311.889000859684 2571.3825874793515 1.0474228009192126 1.0328371775953678 1.0502234769188201 0.768645100441567 1.0453310785010324 0.8396930346586297 0.7411041759664282 0.8871010473970902 0.8767636496982607 0.8990840227808958 1.0 11.328328564610086 QKGESRPET(ph)PK ddPTM_A549_MK2206_60min_R1 1 QKGESRPETPK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKGES(0.003)RPET(0.997)PK 53.403 0.007215300000000001 7887500.0 2089.4 2203.8 1852.6 1716.3 3698.1 2480.2 2225.4 2378.9 3607.9 3088.5 3387.9 True False 2442.0396390744827 2315.9640068091317 2115.326537337422 2136.7935770476342 3154.114388843447 2742.653117776483 2629.7263739558157 2716.116360075703 2790.7164106324035 2390.8057049435924 2546.590928716734 0.9589446076857988 0.9094369970037477 0.830650307233823 0.8390800237886644 1.2385634273946202 1.0769900602601092 1.0326457792264951 1.0665695575395753 1.0958636423159993 0.938825972394536 1.0 11.314351515766246 -6.727118514691881 24.999912464931562 1.0605011905450827 0.8824586980565033 0.5631916644614328 0.07606840229080208 99.96200342915446 72813.60645868746 0.010131608815382373 0.021089842006915854 1.8744829103189854e-07 6.727118514691881 -0.1780424924885794 QKGESRPET(ph)PK ddPTM_A549_PD325901_60min_R1 2 QKGESRPETPK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKGES(0.003)RPET(0.997)PK;QKGES(0.009)RPET(0.991)PK 74.76899999999999 0.00047638 29113000.0 4052.6000000000004 4039.52 4177.110000000001 3441.5 4517.6 3014.28 4141.299999999999 3964.6 3873.27 4984.6 4521.3 True False 4464.016968633564 4379.944527096672 4460.593803602966 3654.0736387864117 4200.299360873929 2989.73270306135 4298.899437706313 3885.5229428314656 3710.4899315592484 4669.871505322844 3965.2087628821273 1.125796202818052 1.1045936769072133 1.124932902740981 0.9215337343626857 1.0592883280679843 0.7539912478374156 1.0841546296245046 0.9799037516519706 0.9357615584563231 1.1777113853467152 1.0 11.953181108534906 -6.252594288408062 24.601671664405792 0.9663868049369707 1.1170562194148281 0.21722392816020863 0.10305599174513998 366.6056351038605 1019670.8545857193 0.010298497045755415 0.026784626830417428 5.589921532396998e-07 6.252594288408062 0.15066941447785742 QKGESRPET(ph)PKQK ddPTM_A549_PD325901_60min_R1 2 QKGESRPETPKQK 13 3 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKGES(0.001)RPET(0.999)PKQK;QKGES(0.011)RPET(0.989)PKQK 85.619 6.8362e-05 18260900.0 3188.2 3288.5 3853.6 3150.8999999999996 4185.7 3455.9 4081.5 4536.5 4465.9 3558.6 3710.1 True False 3511.863716971207 3565.6334359917546 4115.1284695793 3345.523936786894 3891.71087188109 3427.7562961999934 4236.8237159824985 4446.015948684598 4278.213753585586 3333.9093886855244 3253.7812202616465 1.0793177166007515 1.0958430191274604 1.2647219315035538 1.0281957237794463 1.1960579425706273 1.0534685844441494 1.3021231082161704 1.3664151483199845 1.3148437045935013 1.0246261696775774 1.0 11.667901534119155 -7.7200499748589255 24.9999935180659 1.1827098728955918 1.1244379770177375 0.09007787646863086 0.12277166349714562 494.73464759667746 298828.00824038486 0.02287084030873821 0.033922776257755534 1.90524146661214e-08 7.7200499748589255 -0.05827189587785431 QKGS(ph)PDEYHLR ddPTM_A549_MK2206_60min_R1 1 QKGSPDEYHLR 11 1 Q8IYW5 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 1 QKGS(0.999)PDEY(0.001)HLR 77.77600000000001 0.00046861 2713100.0 697.21 696.93 739.53 521.57 1177.5 623.53 604.96 830.87 998.06 1335.6 1123.1 True False 814.8820028520715 732.4007601712894 844.4064742292699 649.3546734141673 1004.2913098248181 689.5115307342843 714.8734012709225 948.6483669326586 772.0010035743162 1033.8870323855144 844.2032740168726 0.9652675225656433 0.8675644631018706 1.0002407005737262 0.7691923182486842 1.1896320954149082 0.8167600765790248 0.8468024506342234 1.1237203125484427 0.9144728850683025 1.2246896739289959 1.0 9.721446614188482 -9.016866232000634 0.007840067468833985 1.9092174432955842 4.346432967261787e-07 0.05510445058987168 0.1408399805341277 5854.550815636925 31.29318292221642 3836.589941992946 3781.268320121865 9.61908512317779e-10 9.016866232000634 -1.9092170086522875 QKGS(ph)PDEYHLR ddPTM_A549_PD325901_60min_R1 1 QKGSPDEYHLR 11 1 Q8IYW5 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 1 QKGS(0.858)PDEY(0.142)HLR 62.287 0.0030949000000000003 4038000.0 1137.2 1168.2 912.95 904.28 1064.9 1123.2 1162.5 929.2 848.77 1068.6 1447.5 True False 1252.6477068376073 1266.6483137982573 974.9082770143294 960.1353218311128 990.1050977055619 1114.0530315957737 1206.739573644409 910.6663770567021 813.0991485771831 1001.1284136315829 1269.4666764585145 0.9867511531158677 0.997779884488091 0.7679668124365996 0.7563296773647051 0.7799378400917939 0.8775756404285422 0.9505878303248588 0.7173613880099847 0.6405045233999529 0.7886212629263131 1.0 10.310006809352874 -5.7519006443741265 24.73680031308717 0.8193358559193277 0.9922656402340235 0.34043728923433514 0.09760910185308479 217.7323647184048 564630.8949114762 0.01868680211458045 0.07047283588881985 1.7705139609357464e-06 5.7519006443741265 0.17292978431469586 QKHEYELNS(ph)TPDKK ddPTM_A549_MK2206_60min_R1 2 QKHEYELNSTPDKK 14 2 Q9UK61-2;Q9UK61-3;Q9UK61;A0A087X0F1;Q9UK61-4 Q9UK61-2 FAM208A Protein FAM208A 1 QKHEYELNS(0.5)T(0.5)PDKK;QKHEYELNS(0.5)T(0.5)PDKK 82.90799999999999 8.881700000000001e-05 16558000.0 2075.52 2457.8 2853.8 2309.5 4311.4 2684.6 2517.6 2791.3999999999996 3564.1000000000004 3663.1 3582.8999999999996 True False 2425.8170344079017 2582.891521887413 3258.5117522689957 2875.327603677395 3677.1987712770465 2968.682590106745 2975.0153316577516 3187.089498303975 2756.8370406981735 2835.6031658665597 2693.1670469905193 0.9007302525547504 0.9590535888866107 1.2099181726993953 1.067638046028534 1.3653808720800047 1.1023016910236223 1.1046531016270171 1.1833983717665748 1.0236413087627825 1.052887962904197 1.0 11.395088002207045 -8.887994420368889 7.550331208964849 1.0103881786986386 1.11615613017285 0.09293552965557816 0.11721489263190649 0.3361664625328977 21.20377477641738 0.02044846449146064 0.0217111922480242 1.2942124688354787e-09 8.887994420368889 0.10576795147421136 QKIDDRDS(ph)DEEGASDR ddPTM_A549_MK2206_60min_R1 9 QKIDDRDSDEEGASDR 16 2 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(0.894)DEEGAS(0.106)DR;QKIDDRDS(0.997)DEEGAS(0.003)DR 244.78 2.1268e-66 1720439300.0 20626.68 23041.73 20799.84 18595.03 29196.500000000004 21183.81 18498.73 19286.2 30744.059999999998 33193.04000000001 32991.719999999994 True False 24107.959310091326 24214.455637813862 23749.57007685007 23150.81318476263 24901.733526369677 23425.466713524995 21859.70978956039 22020.077911510372 23780.579498175448 25694.709210432546 24798.96539884955 0.9721356888223136 0.9764300747376017 0.9576839071662174 0.9335394768459422 1.0041440489902411 0.9446146779418357 0.8814766841270921 0.8879434104348526 0.9589343392236297 1.0361202089351902 1.0 14.597992312859818 -9.932160559208324 1.1840716497967838 0.9933134606883531 0.9462324253183909 0.32231022075170357 0.03686331742326082 0.4717757004988428 1.3342795542796424 0.011626676353938993 0.007000055588960529 1.1690671055584246e-10 9.932160559208324 -0.04708103536996222 QKIDDRDS(ph)DEEGASDR ddPTM_A549_PD325901_60min_R1 9 QKIDDRDSDEEGASDR 16 2 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QKIDDRDS(1)DEEGASDR;QKIDDRDS(0.999)DEEGAS(0.001)DR;QKIDDRDS(0.999)DEEGAS(0.001)DR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(0.828)DEEGAS(0.172)DR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(0.999)DEEGAS(0.001)DR 264.64 5.9954999999999985e-92 3135884100.0 23239.559999999998 23500.010000000002 24350.81 22308.81 27799.07 23778.809999999998 26120.449999999997 27587.410000000003 26962.06 27709.969999999998 28540.910000000003 True False 25598.823023140143 25480.43831599226 26003.402399916005 23686.77452671645 25846.55922478522 23585.16325519932 27114.478018408667 27037.157465645538 25828.93838128929 25960.357765186942 25030.5590057351 1.0227028096845476 1.0179732026821329 1.038866227236795 0.9463142441720636 1.032600159623409 0.9422547554689208 1.0832549929147044 1.0801659467313804 1.0318961863924518 1.037146543920126 1.0 14.611402890543586 -7.764631155591184 24.997252093481304 1.0260127237351175 1.0017221888080987 0.18358204823397495 0.03895022535555173 178.69632140694816 1399515.9200912782 0.006299823027091749 0.008908567706587822 1.71936801899795e-08 7.764631155591184 -0.024290534927018825 QKIDDRDS(ph)DEEGASDRR ddPTM_A549_MK2206_60min_R1 3 QKIDDRDSDEEGASDRR 17 3 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QKIDDRDS(1)DEEGASDRR;QKIDDRDS(1)DEEGASDRR;QKIDDRDS(0.867)DEEGAS(0.133)DRR 113.26 6.7262e-10 79290000.0 3727.0600000000004 4031.27 3049.95 3519.21 4791.3 3329.1899999999996 2918.62 3235.1 5161.400000000001 5813.4 5188.1 True False 4356.09661013159 4236.444424053658 3482.4787717544395 4381.416607983338 4086.5061169967285 3681.4826760625315 3448.895474770792 3693.685332078235 3992.351141062135 4500.148902418351 3899.751585724276 1.1170189983582146 1.0863369963261005 0.8930001553182678 1.1235117190598192 1.047888827574582 0.9440300478469561 0.8843885050001847 0.9471591333149572 1.023744988187667 1.153957836415 1.0 11.929166511852863 -5.546515242350079 24.723316789622096 0.9979622490861743 1.1093485847446423 0.18527310633953842 0.08130938031671121 162.0577323659491 169509.0049913014 0.009053731973137103 0.03506888764309089 2.841088470096661e-06 5.546515242350079 0.111386335658468 QKIDDRDS(ph)DEEGASDRR ddPTM_A549_PD325901_60min_R1 2 QKIDDRDSDEEGASDRR 17 3 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QKIDDRDS(0.752)DEEGAS(0.248)DRR;QKIDDRDS(0.98)DEEGAS(0.02)DRR 187.86 5.8693e-40 119532000.0 6420.5 7655.599999999999 7091.299999999999 6588.700000000001 8418.7 7696.5 8180.7 8096.200000000001 7719.6 8783.2 7844.0 True False 7072.30443347771 8300.764279330535 7572.558261451029 6995.669034976613 7827.399554938324 7633.822255766445 8492.02101515081 7934.714939653974 7395.172057632131 8228.627253049715 6879.237727212843 1.0280651307485906 1.2066401262009636 1.1007844999302105 1.0169250304148076 1.1378294900283425 1.109690136970935 1.2344421506990708 1.1534293848090003 1.0749987645256622 1.1961539314885086 1.0 12.748032996668424 -9.512149205721206 1.1732249636277607 1.0168217316303318 1.1236280081158283 0.0 0.08283235400045105 0.3387302973287961 0.9653150560471819 0.016534080670665374 0.012446224072848493 3.0750401759159643e-10 9.512149205721206 0.10680627648549645 QKIDDRDSDEEGAS(ph)DRR ddPTM_A549_MK2206_60min_R1 1 QKIDDRDSDEEGASDRR 17 3 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QKIDDRDS(0.323)DEEGAS(0.677)DRR 121.74 2.1131e-10 19633000.0 1021.3 1303.5 850.94 937.99 1389.6 1114.3 926.12 872.4 1264.7 1579.3 1507.1 True False 1193.670471612314 1369.8425823013442 971.616087488884 1167.7975921079717 1185.1916807919888 1232.2144863875242 1094.3840161085466 996.0653716129493 978.247469310901 1222.5350331285147 1132.8454761560222 1.0536922261125 1.2092051485693371 0.8576775102512456 1.0308533835263651 1.0462077182967513 1.087716296991079 0.9660488028976527 0.8792596983242623 0.8635312493194535 1.0791719249096776 1.0 10.14573537089822 -7.93345266230584 5.642954917240715 0.9291965321175529 1.0449764939040684 0.16375321443540436 0.0946412724868789 0.20878768102012762 12.5850752819025 0.014065488564472872 0.019490747913190727 1.1655940925841726e-08 7.93345266230584 0.1157799617865155 QKLDPK ddPTM_A549_MK2206_60min_R1 1 QKLDPK 6 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 66.993 0.055886 11883000.0 7489.6 7828.1 7824.1 5720.9 10286.0 7841.8 7453.9 7375.7 9733.5 10028.0 10258.0 False True 8753.661376860457 8226.516853481515 8933.675030109976 7122.520756820958 8772.94302578181 8671.614071034443 8808.177145155598 8421.22806213392 7528.877791205541 7762.667835251528 7710.655493602595 1.135268121383873 1.066902400231332 1.158614210882862 0.9237244178177065 1.1377687711583764 1.1246273521400534 1.1423383073544913 1.092154625390912 0.9764251298027941 1.0067455149166096 1.0 12.912637795538062 -8.755671262865217 23.804550266622115 0.988867418791846 1.0966056934538297 0.3594387672760747 0.06127384844978513 54.35978155210025 224337.6048399416 0.009914312777022441 0.011085624180117697 1.7552085958985334e-09 8.755671262865217 0.10773827466198371 QKLS(ph)ECSLTK ddPTM_A549_PD325901_60min_R1 1 QKLSECSLTK 10 1 E7EUH7;Q96PZ0;Q96PZ0-2 E7EUH7 PUS7 Pseudouridylate synthase 7 homolog 1 QKLS(0.999)ECS(0.001)LTK 48.527 0.008640799999999999 2016900.0 1627.1 1997.6 2071.1 2139.0 2992.9 2191.5 1981.1 2018.9 1855.7 2228.2 2062.1 True False 1792.2819941922876 2165.9447625778107 2211.657300536041 2271.1211719785374 2782.689028944482 2173.653150589508 2056.4918445995177 1978.6314557035885 1777.711382370582 2087.5110717330085 1808.4747727289127 0.991046168417273 1.197663796719426 1.222940642516535 1.2558213176241937 1.5386938601004208 1.2019261663847025 1.1371415712348354 1.0940885023891798 0.9829893173948399 1.154293719332917 1.0 10.820557757959762 -8.24077087163074 1.6715257383910054 0.9924465392653776 1.244508103860046 0.2599555516321227 0.12970987744938983 0.24212259374005002 1.31904526810112 0.02152625476744109 0.028040097025302208 5.7441943883137254e-09 8.24077087163074 0.25206156459466844 QKMDS(ph)DEDEKEGEEEK ddPTM_A549_MK2206_60min_R1 7 QKMDSDEDEKEGEEEK 16 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK 156.29 6.6009e-21 221779100.0 18472.899999999998 18884.899999999998 18673.7 15455.099999999999 22563.3 18187.399999999998 15965.400000000001 17436.1 24413.7 30002.199999999997 28590.300000000007 True False 21590.673900956735 19846.060746070325 21321.911454322482 19241.600193805796 19244.268459422783 20111.97859618095 18866.106520515066 19907.720570816757 18884.035930667782 23224.682182567136 21490.5394578618 1.0046594662405417 0.9234789468632961 0.9921533843359326 0.8953521260615316 0.8954762860726014 0.9358526637088891 0.8778796157028693 0.9263481081920442 0.8787139088665133 1.0806933082394514 1.0 14.391414077457712 -2.2583276054305026 1.1156800626481236 0.931247911321512 81.69762773735857 0.06483995537378917 0.05969013860703579 3152.751155365381 4.417840298206699 0.007481903606735377 651418.6849325593 0.005516611425613795 2.2583276054305026 80.76637982603707 QKMDS(ph)DEDEKEGEEEK ddPTM_A549_PD325901_60min_R1 4 QKMDSDEDEKEGEEEK 16 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK;QKMDS(1)DEDEKEGEEEK 154.84 1.7766e-20 423818000.0 28317.399999999998 30512.2 29946.8 26246.6 32462.199999999997 26371.3 30800.399999999998 31451.2 28967.199999999997 32528.5 32765.7 True False 31192.1616018319 33083.57017657521 31979.169932737514 27867.792871646478 30182.167060510394 26156.540876176634 31972.52607662558 30823.881143010905 27749.80932015147 30474.644958651475 28735.726618885496 1.0854836564784134 1.151304458570129 1.1128714563883826 0.9697960048565955 1.0503359619476014 0.9102446311201406 1.1126402509555064 1.0726675386295277 0.9656901907576589 1.0605141593539222 1.0 14.81055790953742 -6.248767223467908 20.268485911467334 0.9977743794496072 1.1200285847956482 0.3270543915062929 0.05815614443211748 39.72734142551376 63538.59625975743 0.007585674647144611 0.019828266780819392 5.63939839693958e-07 6.248767223467908 0.12225420534604092 QKNEGRPET(ph)PK ddPTM_A549_PD325901_60min_R1 2 QKNEGRPETPK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKNEGRPET(1)PK;QKNEGRPET(1)PK 58.21 0.004075 13780100.0 2909.3999999999996 3210.6000000000004 3569.1 2479.2 3804.6000000000004 3006.3999999999996 3032.7 3820.6000000000004 3495.3 3707.5 3744.1 True False 3204.760146212922 3481.1685296016785 3811.320588741817 2632.334553328277 3537.378021157462 2981.916875168743 3148.1110580571176 3744.3951357972837 3348.4046962331695 3473.40781727409 3283.599435805403 0.9759899795532936 1.0601684516210839 1.1607142293855872 0.8016612881048983 1.0772867063457185 0.9081244327956027 0.9587378483895211 1.140332494568984 1.01973604323387 1.057804974443276 1.0 11.681062429066476 QKPITPETAEK ddPTM_A549_PD325901_60min_R1 2 QKPITPETAEK 11 1 A0A590UJK8;P60953-1;P60953 A0A590UJK8 CDC42 Cell division control protein 42 homolog 0 ; 93.62299999999999 0.00029305 13790900.0 4228.9 5350.4 5033.3 4900.2 5484.8 5173.200000000001 4753.2 5385.0 5473.6 5381.1 5602.4 False True 4658.214814848358 5801.296985230431 5374.89000569169 5202.874224838345 5099.566569532793 5131.0711743689935 4934.085627050841 5277.59195054922 5243.563626956737 5041.336427655728 4913.340316539674 0.9480749377704426 1.1807236241506918 1.093938066451109 1.058928120106808 1.0379021685850316 1.044314222871226 1.0042222417285716 1.074135233983971 1.0672095334624876 1.0260507318585654 1.0 12.26248845372871 -6.556288841013988 3.1366988929756547 1.0348771979147495 1.0843249264192105 0.07843272483767127 0.05468538533669638 0.38242040613829315 7.710221733545448 0.007600302884655509 0.017648205454654894 2.7778651478860123e-07 6.556288841013988 0.049447728504461 QKPQEVPQENGMEDPSIS(ph)FSKPK ddPTM_A549_PD325901_60min_R1 2 QKPQEVPQENGMEDPSISFSKPK 23 2 O00567 O00567 NOP56 Nucleolar protein 56 1 QKPQEVPQENGMEDPS(0.197)IS(0.644)FS(0.159)KPK;QKPQEVPQENGMEDPS(0.151)IS(0.731)FS(0.118)KPK 98.565 6.6469e-08 11962400.0 3998.6 4010.2999999999997 4397.9 3926.9 5108.0 4199.7 4245.3 4406.2 3935.5 4648.2 4313.5 True False 4404.534928386262 4348.2620551490745 4696.36794072109 4169.455694363029 4749.231701643357 4165.499035606098 4406.8572146173 4318.314884402971 3770.104621069907 4354.711858733227 3782.9668455293986 1.1643070394844763 1.1494317113267132 1.2414509913749634 1.102165539539521 1.2554251452813716 1.1011196253355393 1.164920919099568 1.1415153927416073 0.9965999637362162 1.1511366703833263 1.0 11.88530241711601 -8.714786735363111 4.186883473021286 0.9978896045484816 1.1676642626096203 0.3226012311253531 0.06455832121197586 0.06787384277217531 2.4963225505319873 0.006985286368088251 0.0077845299251447 1.928471675963862e-09 8.714786735363111 0.16977465806113867 QKPSNTEDFIEDIVK ddPTM_A549_MK2206_60min_R1 2 QKPSNTEDFIEDIVK 15 1 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 0 ; 73.156 0.00086768 1278350.0 1024.83 1132.85 751.28 880.0400000000001 1290.94 1190.91 881.05 674.6 1576.63 1393.58 1512.32 False True 1197.7962493120995 1190.5072262064268 857.822800912695 1095.6498395064966 1101.0444360978777 1316.9313057379213 1041.1253805040767 770.2266158758545 1219.5258223607534 1078.7693101166562 1136.7692060913516 1.0536846379139546 1.0472725860509955 0.7546147417752621 0.9638278672887004 0.9685734185953986 1.158486083790074 0.9158634619280944 0.6775576007413051 1.0727998399551575 0.9489783012559592 1.0 10.150723663759868 QKPSNTEDFIEDIVK ddPTM_A549_PD325901_60min_R1 1 QKPSNTEDFIEDIVK 15 1 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 0 125.54 1.4223e-07 1158800.0 797.69 916.06 749.75 891.85 1190.1 987.75 821.63 1152.2 1019.3 1213.7 1183.9 False True 878.6709015716593 993.2595911128493 800.6325436130057 946.9375489616916 1106.511481622114 979.7060914874686 852.8975792631875 1129.2184671165865 976.4623657112315 1137.0667748686622 1038.2878053604381 0.8462691144355988 0.956632242028541 0.7711084917683964 0.9120183672319694 1.0657078662673807 0.9435785400054534 0.8214462067837799 1.0875775110587782 0.9404544295618071 1.0951364053379526 1.0 10.019990687715955 -2.0000014141618467 0.1964893663105602 0.9920571850352922 0.3444808242908973 0.25529913446784414 0.08891521544895684 60.19332345444992 0.6629794425275235 0.06713804052997398 12.087077767863775 0.009999967437773141 2.0000014141618467 -0.6475763607443948 QKQEPKT(ph)PVAPK ddPTM_A549_MK2206_60min_R1 2 QKQEPKTPVAPK 12 2 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 QKQEPKT(1)PVAPK;QKQEPKT(1)PVAPK 56.648 0.0054967 12555100.0 2751.8 2886.4 2900.5 2696.1000000000004 3292.1 2989.0 2985.6 2890.2 4134.5 3861.3999999999996 4105.2 True False 3216.236564949345 3033.305431188799 3311.834514491632 3356.6446210325266 2807.8364510185006 3305.2939960623776 3528.04487376763 3299.8947008662844 3198.042351439801 2989.1070581412296 3085.7655422438484 1.042281573541269 0.9829993204808093 1.073261875911478 1.0877834284816421 0.9099318832164908 1.071142298665665 1.1433288840221392 1.0693925561391582 1.036385398585503 0.9686760115830665 1.0 11.59141273416244 -9.998965309751913 1.105007673546301 1.0051854059298353 1.0459117651721135 0.12570362025288817 0.05811972594356294 0.9036637581310746 2.224268554876287 0.019427095915436357 0.010860718373160175 1.0023853026597174e-10 9.998965309751913 0.04072635924227819 QKQEPKT(ph)PVAPK ddPTM_A549_PD325901_60min_R1 1 QKQEPKTPVAPK 12 2 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 QKQEPKT(1)PVAPK 57.159 0.0051229 8044000.0 1392.0 1493.4 1462.5 1309.4 1985.1 1764.8 1582.3 1792.0 1687.0 2147.9 2409.5 True False 1533.3148152637616 1619.2540590877559 1561.7540447269378 1390.278664136837 1845.6734242232237 1750.4280539175757 1642.5152923677836 1756.2571542031951 1616.1012567005293 2012.2812274370922 2113.146775078956 0.725607342256891 0.7662761897016139 0.7390655789485252 0.6579186455635058 0.8734241492308368 0.8283513831414632 0.7772840541596606 0.8311098759988282 0.7647841956648491 0.9522676092208052 1.0 11.045177262216264 -14.999999999999998 0.2172105598213193 2.1919935750910287 0.7400090619196606 0.682815091415877 0.054086360589495806 17.54067933028448 0.21454088992551176 8.906215843698114 0.03782326797734182 1.000000000000004e-15 14.999999999999998 -1.451984513171368 QKRPS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 QKRPSPSR 8 2 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59;E9PJG2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QKRPS(0.997)PS(0.003)R 43.512 0.022517 21774000.0 1122.4 1233.6 1333.8 1039.3 1110.0 996.76 1164.8 927.22 1500.2 1662.2 1589.0 True False 1311.8336799546275 1296.3849708683833 1522.9528962002894 1293.9285466559493 946.720470408109 1102.2364816042605 1376.4290825845858 1058.6562744921582 1160.4070953271241 1286.7078655519642 1194.4074458310133 1.0983133808596734 1.0853791772592465 1.2750698277342782 1.0833225723536024 0.792627736634231 0.922831220997099 1.1523949280364125 0.8863443360030248 0.9715337085158295 1.07727716370416 1.0 10.222079348909265 -6.531073334266524 24.965637979774286 0.9738467021716127 1.1516715810118794 0.397425900061702 0.09946910838292083 126.26074487660324 384665.6484877285 0.012903141970125176 0.026895102529022955 2.9439244854804383e-07 6.531073334266524 0.17782487884026665 QKRPS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 QKRPSPSR 8 2 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59;E9PJG2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QKRPS(0.999)PS(0.001)R 65.347 0.0029525 46158000.0 1330.5 1335.7 1723.5 1315.8 1823.5 1191.8 1637.8 1611.8 1366.2 1543.5 1713.3 True False 1465.5713805376677 1448.2641266395572 1840.4670742474361 1397.0739776013831 1695.4236507334904 1182.0943759400313 1700.1273752385478 1579.651384567361 1308.7833650884781 1446.0431465846425 1502.574961503539 0.9753732213607206 0.9638548250467077 1.22487537820129 0.9297865420327601 1.128345469724172 0.7867124145055489 1.1314759122149418 1.051296224839722 0.8710270027252783 0.9623767090712543 1.0 10.553221251566416 -8.743058993370722 24.979186350704236 0.939096076063441 1.0246736883034513 0.08709025830656425 0.11425144969737044 403.861402624454 548852.7525411391 0.018720075561677478 0.02120772643802509 1.8069286611085338e-09 8.743058993370722 0.08557761224001026 QKRS(ph)PRPPR ddPTM_A549_MK2206_60min_R1 1 QKRSPRPPR 9 3 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 QKRS(1)PRPPR 67.93 0.0013822 118360000.0 5286.2 5333.2 5275.9 4765.5 6833.0 5447.1 5016.2 4901.9 7131.4 7993.0 8156.7 True False 6178.381324818382 5604.637100061009 6024.101953113735 5933.047713931424 5827.874751620364 6023.508506507653 5927.57860925549 5596.759336439152 5516.149286505699 6187.37574862041 6131.166276532296 1.0077008265893566 0.9141225090425887 0.9825376904507775 0.9676866433456238 0.9505328168846418 0.9824408986530483 0.966794626324838 0.9128376370840496 0.8996900487953423 1.009167827058167 1.0 12.581945815564792 QKRS(ph)PRPPR ddPTM_A549_PD325901_60min_R1 2 QKRSPRPPR 9 3 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 QKRS(1)PRPPR;QKRS(1)PRPPR 77.062 0.0005723 292370000.0 8075.4 7746.3 8082.4 8268.9 9847.8 8300.1 8684.2 9059.8 9583.3 9143.7 9559.400000000001 True False 8895.208663204725 8399.107886642212 8630.920267419478 8779.651172965549 9156.124501065678 8232.506737489382 9014.681983176577 8879.095181724388 9180.547227823461 8566.365221526397 8383.654402029375 1.0610180521100108 1.0018432874104515 1.0294938046742779 1.047234386336383 1.092140021760596 0.981971147987278 1.075268796981237 1.0590960404540393 1.0950531579165748 1.0217936964878698 1.0 13.03336353078901 -6.254205300698236 6.653946687353192 1.047985201709452 1.0277968121944956 0.034264309049882535 0.03587661101959256 0.43198144579140735 107.77697203449468 0.005833650985089985 0.014798495845914722 5.569224170342721e-07 6.254205300698236 -0.020188389514956384 QKS(ph)AEPS(ph)PTVMSTSLGSNLSELDR ddPTM_A549_PD325901_60min_R1 2 QKSAEPSPTVMSTSLGSNLSELDR 24 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 QKS(0.983)AEPS(0.521)PT(0.452)VMS(0.029)T(0.01)S(0.004)LGS(0.001)NLSELDR;QKS(0.972)AEPS(0.938)PT(0.071)VMS(0.01)T(0.007)S(0.003)LGSNLSELDR 50.261 0.0047692 9318600.0 3613.5 4367.700000000001 3659.7 3414.1 5029.4 4668.4 4757.299999999999 4514.7 4623.4 4791.9 4397.1 True False 3980.339859881895 4735.781407444483 3908.069249563875 3624.981203016326 4676.152294488077 4630.382098203088 4938.341654794448 4424.650766786365 4429.094576306593 4489.33861620923 3856.2845755134613 1.032169639438997 1.228068446378576 1.0134286443431157 0.9400191121874513 1.2126056059712478 1.2007366177291408 1.280595754305013 1.1473869939168653 1.1485393491005167 1.1641616504952772 1.0 11.912995804210544 -4.28236773097168 16.279230284189126 1.1009056161977888 1.1015560515299325 0.0 0.10777760359920205 0.0 0.0 0.015072587068031112 0.0 5.219540467200749e-05 4.28236773097168 0.0006504353321437062 QKS(ph)AEPSPT(ph)VMSTSLGSNLSELDR ddPTM_A549_MK2206_60min_R1 1 QKSAEPSPTVMSTSLGSNLSELDR 24 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 QKS(0.863)AEPS(0.323)PT(0.665)VMS(0.089)T(0.04)S(0.018)LGS(0.002)NLS(0.001)ELDR 46.43 0.0059588 4694400.0 1344.8 1626.6 1350.3 1224.0 2285.8 1528.0 1553.6 1460.8 2163.3 2080.1 2029.7 True False 1571.769362796671 1709.3869922296642 1541.7928443089295 1523.8800549474474 1949.56184798095 1689.6919457956878 1835.869009875868 1667.8728735123757 1673.3160040802338 1610.2039653078084 1525.6694731297723 1.0302161709851407 1.1204176411310192 1.0105680630458453 0.9988271259182672 1.2778402414918881 1.1075085236708828 1.2033202749411702 1.0932072135459892 1.0967749132763194 1.055408129786212 1.0 10.575226729713904 -10.320429933474042 0.8199079838721528 1.0031527469736814 1.1064972229250556 0.11182548225263034 0.07880045742769201 0.7539829431658279 0.9603627223963767 0.04372378267749988 0.015176007389679993 4.7815650289387e-11 10.320429933474042 0.10334447595137419 QKS(ph)DAEEDGGT(ph)VSQEEEDRKPK ddPTM_A549_MK2206_60min_R1 1 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.548)VS(0.452)QEEEDRKPK 51.538999999999994 0.051221 4743100.0 671.24 417.37 371.3 393.9 795.0 611.16 529.82 477.04 573.23 804.53 823.36 True False 784.528901757612 438.6123502685939 423.9559231962568 490.4055176828429 678.0565531301322 675.8325455448253 626.0814358988365 544.661880873729 443.3943202602099 622.7861142296479 618.8969884200268 1.2676243646950431 0.7087000881815907 0.6850185590312335 0.7923863370781494 1.0955887099420745 1.091995207910364 1.011608470574644 0.8800525629704363 0.7164266890232329 1.0062839630542548 1.0 9.27355549151982 -5.244348651559806 23.859536866957992 0.878880941343047 1.2676249551350742 0.33154693877379315 0.14811425266114717 1731.7035664011642 2417475.3676292016 0.02267604256991841 0.8462456776252364 5.69706728151713e-06 5.244348651559806 0.3887440137920273 QKS(ph)DAEEDGGT(ph)VSQEEEDRKPK ddPTM_A549_PD325901_60min_R1 1 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.56)VS(0.44)QEEEDRKPK 94.19200000000001 5.7578999999999995e-06 7379900.0 654.73 826.5 1310.4 717.72 814.89 785.93 1051.1 965.89 817.84 961.17 1008.5 True False 721.1977076132484 896.1520556020024 1399.3316240753359 762.0519343396139 757.6549376178851 779.5296466542611 1091.10018568399 946.6245662239534 783.4690289152109 900.481562165701 884.4608934082296 0.8154093787393426 1.013218404884722 1.582129446880433 0.8616004845653285 0.8566290983180687 0.8813613495678473 1.2336330456392315 1.070284252564496 0.8858153421528325 1.0181134845835145 1.0 9.788654545089237 QKS(ph)DAEEDGGTVS(ph)QEEEDR ddPTM_A549_MK2206_60min_R1 4 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.003)VS(0.997)QEEEDR;QKS(1)DAEEDGGT(0.002)VS(0.998)QEEEDR;QKS(1)DAEEDGGT(0.002)VS(0.998)QEEEDR;QKS(1)DAEEDGGT(0.011)VS(0.989)QEEEDR 171.87 1.1396999999999997e-34 468357000.0 17597.6 17669.5 15072.2 14711.8 24183.800000000003 19791.6 17678.800000000003 20934.999999999996 25960.6 24641.6 23158.800000000003 True False 20567.644659987112 18568.802077463446 17209.66459897285 18316.191660437802 20626.39505608615 21885.93397539919 20890.80912190621 23902.600360748613 20080.565550559477 19075.04544566554 17407.83080963579 1.1815168061377448 1.0666924719411348 0.9886162605306774 1.052181162646595 1.1848917468033282 1.2572464780209507 1.2000811215572293 1.3730947079010993 1.1535363463806325 1.0957738304250344 1.0 14.087448819462335 -4.397583841814205 16.421565905098607 1.114700523581898 1.1098957818483395 0.0 0.11317778027152166 0.0 0.0 0.016965139611117702 0.0 4.0032817635004236e-05 4.397583841814205 -0.004804741733558604 QKS(ph)DAEEDGGTVS(ph)QEEEDR ddPTM_A549_PD325901_60min_R1 4 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.028)VS(0.972)QEEEDR;QKS(1)DAEEDGGT(0.017)VS(0.983)QEEEDR;QKS(1)DAEEDGGT(0.021)VS(0.979)QEEEDR;QKS(1)DAEEDGGT(0.034)VS(0.966)QEEEDR 206.31 7.3005e-56 920560000.0 51288.3 54873.6 57139.1 41925.6 64079.0 34086.5 44801.0 43011.9 51760.6 51907.2 51624.3 True False 56495.05045954908 59497.99085091596 61016.902931320954 44515.24909205393 59578.3121005491 33808.91084534306 46505.926571047865 42153.9939123172 49585.281984335146 48629.77053346183 45274.838373400555 1.2478244536978957 1.3141513694695297 1.3477000719050392 0.983222705841996 1.3159254508913274 0.7467483498562008 1.027191443235954 0.9310688989026434 1.0952061623143645 1.0741014718239685 1.0 15.466421870458527 -6.423321244032757 1.51533259899379 1.023781143331811 1.3086078554174487 0.4391286998805891 0.13522405019813205 0.28484033189795777 1.2498015334452368 0.018746331620138862 0.06263613841055721 3.7729300716937955e-07 6.423321244032757 0.2848267120856378 QKS(ph)DAEEDGGTVS(ph)QEEEDRKPK ddPTM_A549_MK2206_60min_R1 6 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.001)VS(0.999)QEEEDRKPK;QKS(1)DAEEDGGT(0.001)VS(0.999)QEEEDRKPK;QKS(1)DAEEDGGT(0.019)VS(0.981)QEEEDRKPK;QKS(1)DAEEDGGTVS(1)QEEEDRKPK;QKS(1)DAEEDGGT(0.006)VS(0.994)QEEEDRKPK;QKS(1)DAEEDGGT(0.209)VS(0.791)QEEEDRKPK 236.34 2.9421e-98 6592059000.0 47968.0 50424.9 49910.299999999996 44016.69999999999 64178.1 51866.6 49603.3 51131.9 72918.0 70275.4 70132.6 True False 56063.82569499604 52991.31202783816 56988.33103555652 54800.79347598477 54737.586506215 57355.08918573734 58615.577534484815 58380.00340987636 56402.18942611868 54400.138331614966 52716.73985870867 1.0634918973604632 1.0052084436531052 1.0810291225955277 1.03953305198428 1.0383340595970576 1.0879862703850878 1.1118968603063506 1.1074281825155796 1.0699104227098972 1.0319329017199876 1.0 15.685973532613442 -10.547559185715434 0.979682277063214 1.0021889433014861 1.0665836974177765 0.27157354379288157 0.030995222202698097 0.4377266999792582 0.7859262453329763 0.018110964846845316 0.005803359708712808 2.8342673528002123e-11 10.547559185715434 0.06439475411629036 QKS(ph)DAEEDGGTVS(ph)QEEEDRKPK ddPTM_A549_PD325901_60min_R1 13 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.003)VS(0.997)QEEEDRKPK;QKS(1)DAEEDGGT(0.046)VS(0.954)QEEEDRKPK;QKS(1)DAEEDGGT(0.008)VS(0.992)QEEEDRKPK;QKS(1)DAEEDGGT(0.045)VS(0.955)QEEEDRKPK;QKS(1)DAEEDGGT(0.001)VS(0.999)QEEEDRKPK;QKS(1)DAEEDGGTVS(1)QEEEDRKPK;QKS(1)DAEEDGGT(0.028)VS(0.972)QEEEDRKPK;QKS(1)DAEEDGGT(0.003)VS(0.997)QEEEDRKPK;QKS(1)DAEEDGGT(0.064)VS(0.936)QEEEDRKPK;QKS(1)DAEEDGGT(0.004)VS(0.996)QEEEDRKPK;QKS(1)DAEEDGGT(0.064)VS(0.936)QEEEDRKPK;QKS(1)DAEEDGGT(0.001)VS(0.999)QEEEDRKPK;QKS(1)DAEEDGGT(0.19)VS(0.81)QEEEDRKPK 269.59 2.951399999999999e-124 12142187200.0 133938.04000000004 144911.78 147844.27000000002 113885.8 173721.37 110033.18000000001 140191.82 147265.26 140703.63999999998 150845.63 146898.58999999997 True False 147535.33122082663 157124.00426853602 157877.8712220182 120920.26721258218 161519.78027739143 109137.10626346446 145526.89642600762 144327.93886193834 134790.35532088828 141321.21117832357 128830.9946968857 1.1451850664348948 1.2196133751681284 1.225464971325217 0.9385960847161359 1.2537338600653989 0.8471339254986183 1.129595380121097 1.1202889429016203 1.0462571963992344 1.0969504001022807 1.0 16.975120199225454 -2.0000000000003006 0.20159541998927705 1.0027980605977498 1.9972378612318102 0.13009335329357896 0.11226142504713134 48.94795312963223 0.5461167638322563 0.07776543890773349 15.612183567791627 0.009999999999993077 2.0000000000003006 0.9944398006340605 QKS(ph)DAEEDGGTVSQEEEDR ddPTM_A549_MK2206_60min_R1 5 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKS(0.961)DAEEDGGT(0.039)VSQEEEDR;QKS(0.999)DAEEDGGT(0.001)VSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR;QKS(0.986)DAEEDGGT(0.014)VSQEEEDR 282.4 4.746399999999999e-127 2174744600.0 64504.9 66547.8 60673.2 55648.200000000004 82350.9 72761.5 64897.3 77093.0 84684.4 84625.20000000001 78993.5 True False 75391.75012660831 69934.79877136422 69277.57209607096 69282.0114981427 70237.19169957754 80461.07363482511 76688.29936574218 88021.16883741069 65503.518613198336 65508.30854524614 59377.2338403097 1.2697080219224823 1.177804930412357 1.1667362659969547 1.1668110320610607 1.1828976723381022 1.355082890038608 1.2915438191679525 1.4824060190162538 1.1031756512835338 1.103256320788292 1.0 15.857622264759797 -8.973088599215506 15.693998618954875 1.0455044452713897 1.2564228181369508 0.46434068920445304 0.09306832770919929 1.8602194352414567 1084.7972518641066 0.017450186411944426 0.018187907550292214 1.0639259474945363e-09 8.973088599215506 0.21091837286556103 QKS(ph)DAEEDGGTVSQEEEDR ddPTM_A549_PD325901_60min_R1 5 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR 314.37 6.044799999999998e-164 2154076300.0 59404.9 64042.799999999996 65306.0 50151.67 72036.8 42711.47 56568.799999999996 54047.700000000004 56061.4 61789.4 57083.8 True False 65435.64171642399 69439.91151422611 69738.05787688016 53249.42475319344 66977.18368146868 42363.641949262725 58721.55663963509 52969.6762238996 53705.33431676999 57888.00673895506 50062.8544840225 1.3070697304586916 1.3870545782879355 1.3930100190179324 1.0636513898780569 1.3378618612896787 0.8462090782854388 1.1729566211286655 1.0580634438414775 1.0727581331565899 1.1563065537429542 1.0 15.61145293251211 -6.60288363285453 1.0751722203227574 1.038905853180321 1.3742228758857817 0.4782924638979015 0.12135861723589533 0.27380140309895756 0.5940261365725557 0.01652437417681909 0.06006472162591501 2.495263231319162e-07 6.60288363285453 0.3353170227054607 QKS(ph)DAEEDGGTVSQEEEDRKPK ddPTM_A549_MK2206_60min_R1 8 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK 315.25 1.0783999999999997e-177 10063862200.0 56814.369999999995 61845.14 57040.590000000004 50285.229999999996 77769.51999999999 64453.10999999999 57870.89 61037.280000000006 83085.42 85449.53 79127.16 True False 66403.24667801485 64992.79346404922 65129.803374923686 62605.113607389714 66329.72662866012 71273.49531968817 68385.28162006653 69689.50135883052 64266.7050301521 66146.42182572416 59477.70237348135 1.11643933824218 1.0927253553934662 1.095028906226922 1.0525812381633415 1.1152032439342143 1.1983229424724058 1.1497633380430765 1.1716912149905472 1.0805176135856582 1.1121213359986164 1.0 15.860061296637017 -9.708849446071643 1.0134078922649388 1.0136746795936453 1.120950485219716 0.10609754734580301 0.049367007357450046 0.2718322833138394 0.5773456230305742 0.01368771361197099 0.008801879716494366 1.9550170708511834e-10 9.708849446071643 0.10727580562607075 QKS(ph)DAEEDGGTVSQEEEDRKPK ddPTM_A549_PD325901_60min_R1 9 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(0.998)DAEEDGGT(0.002)VSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK 288.84 1.6303999999999995e-156 9259513900.0 51631.689999999995 63863.17 54946.92999999999 50259.41000000001 67133.15 43597.42 53767.469999999994 56865.92 63712.72 66011.21 57570.69 True False 56873.301159558745 69245.14346371467 58675.95909253189 53363.8196082982 62417.94914079455 43242.3770661985 55813.6204935385 55731.684615148755 61035.09594535206 61843.25093505643 50489.86010067247 1.126430159365826 1.3714663365207542 1.1621335249401967 1.0569215185365002 1.2362472190720768 0.856456662386802 1.1054421696208092 1.103819351133565 1.208858488093516 1.224864771099509 1.0 15.623706059466777 -5.99523358569369 24.477189351343394 1.0923643753773875 1.2534112196081093 0.198371581993936 0.11584973587777181 110.21866882773625 565988.9946750582 0.015573112198510689 0.04815707672484456 1.0110355215938164e-06 5.99523358569369 0.1610468442307218 QKS(ph)DTVLFPAK ddPTM_A549_MK2206_60min_R1 1 QKSDTVLFPAK 11 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 QKS(0.986)DT(0.014)VLFPAK 77.77600000000001 0.00030992 5171300.0 1948.6 2457.7 2686.6 2132.1 3278.1 2501.6 2635.5 2343.4 4081.2 3597.5 2885.2 True False 2277.476041303979 2582.7864323145486 3067.600278101438 2654.464595713606 2795.8958324728114 2766.317651572313 3114.336235535433 2675.584126361513 3156.814716337193 2784.822251427739 2168.7252125309246 1.050145047489046 1.1909237820407916 1.414471626177812 1.2239746097735538 1.2891886055080128 1.2755500953225845 1.4360215934876186 1.2337128331897238 1.4556084367429647 1.2840825731803167 1.0 11.08263155314811 -11.00637149756428 1.2928987598780304 1.0003032742218467 1.3053880441557506 0.0 0.1399230102448476 0.3149164082119344 0.9386996808060862 0.08373516489668642 0.019114720881221965 9.85436178206842e-12 11.00637149756428 0.3050847699339039 QKS(ph)DTVLFPAK ddPTM_A549_PD325901_60min_R1 1 QKSDTVLFPAK 11 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 QKS(0.844)DT(0.156)VLFPAK 100.54 7.3989e-05 7508300.0 3589.2 3861.4 4111.6 3588.4 4689.4 3991.9 4089.9 3689.2 4510.8 4396.5 4426.1 True False 3953.572941770612 4186.813729584478 4390.6379010593355 3810.047318152306 4360.032721551756 3959.391289910228 4245.543382579156 3615.616011878586 4321.226762729545 4118.904239688619 3881.717759359605 1.0185111816122512 1.078598184911622 1.1311069411145673 0.9815364110297594 1.1232224988637665 1.0200100922750852 1.0937279951233687 0.9314474250892162 1.113225389020156 1.0611034843419795 1.0 11.922479507820512 QKS(ph)EEELKDKNQLLEAVNK ddPTM_A549_MK2206_60min_R1 3 QKSEEELKDKNQLLEAVNK 19 3 H0YM11;V9GY01;Q9Y448-3;Q9Y448-2;Q9Y448 H0YM11 KNSTRN Small kinetochore-associated protein 1 QKS(1)EEELKDKNQLLEAVNK;QKS(1)EEELKDKNQLLEAVNK;QKS(1)EEELKDKNQLLEAVNK 77.235 0.00011266 16860800.0 6086.6 8126.5 7946.6 7488.799999999999 11617.7 8297.8 7501.299999999999 7988.9 10829.0 9341.2 11086.8 True False 7113.869276917175 8540.104138912066 9073.547372128667 9323.556336185009 9908.751719874135 9175.867688366137 8864.189111600053 9121.351039980162 8376.248790359563 7231.016432254844 8333.641579886264 0.8536327377081969 1.0247745906812349 1.088785410933464 1.118785376933892 1.1890062255364442 1.1010633947244186 1.0636633489247123 1.0945216388949437 1.0051126761410203 0.8676898763809725 1.0 13.024731337421505 -8.775386805776206 22.322704297435134 1.0024142761106103 1.0729592073847845 0.1866421268954862 0.08829096970112894 95.6573489548886 153097.43338078554 0.013884572595401152 0.014830685257920929 1.6773094515968872e-09 8.775386805776206 0.07054493127417416 QKS(ph)EEELKDKNQLLEAVNK ddPTM_A549_PD325901_60min_R1 4 QKSEEELKDKNQLLEAVNK 19 3 H0YM11;V9GY01;Q9Y448-3;Q9Y448-2;Q9Y448 H0YM11 KNSTRN Small kinetochore-associated protein 1 QKS(1)EEELKDKNQLLEAVNK;QKS(1)EEELKDKNQLLEAVNK;QKS(1)EEELKDKNQLLEAVNK;QKS(1)EEELKDKNQLLEAVNK 115.55 1.1204000000000001e-14 46159000.0 10490.8 10798.6 12006.8 9748.099999999999 15183.6 12415.5 13222.2 13302.2 14755.5 12981.2 13094.3 True False 11555.818293081224 11708.635919690001 12821.653650753766 10350.217997458605 14117.156316576376 12314.392284345908 13725.378056465468 13036.87718562598 14135.377648633465 12161.564816614551 11483.784111606708 1.006272686840369 1.0195799403661754 1.1165007567318221 0.9012898446077192 1.2293122353552526 1.0723287868064064 1.1951964546767446 1.135242273707458 1.2308989363834155 1.0590206763224335 1.0 13.487310493643092 -6.7656287994449205 24.999969351673233 1.1241382165052636 1.0190721778835063 0.33170119302060663 0.08174013656224716 132.3967375209932 790072.4504074106 0.014194873885045898 0.027524185852901353 1.715422888822491e-07 6.7656287994449205 -0.10506603862175723 QKS(ph)EGGVYHDPHSDDGTAPK ddPTM_A549_MK2206_60min_R1 1 QKSEGGVYHDPHSDDGTAPK 20 1 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 QKS(0.999)EGGVY(0.001)HDPHSDDGTAPK 93.633 1.1043000000000002e-06 7212100.0 991.62 1145.6 1074.9 995.09 1266.0 1159.1 1029.6 1159.1 1495.2 2050.5 1972.0 True False 1158.9812132186448 1203.9061467467745 1227.3369831501655 1238.887094671288 1079.7730770600592 1281.7551926516899 1216.6649926417315 1323.4059745948748 1156.5395873437635 1587.2906258659023 1482.2979755687588 0.7818813978842162 0.8121890244671183 0.8279961272154037 0.83578815804287 0.7284453563702329 0.8647081853834951 0.8207965015771517 0.8928069770095199 0.7802342082400797 1.0708310016121136 1.0 10.533619775938657 -10.893132978433018 0.7668768156147241 1.0215055352759475 0.8143115408790533 0.7539546857026784 0.04733582455387238 0.35318964456091295 0.30248020282218596 0.04794831314610552 0.007646258992245081 1.2789896250448928e-11 10.893132978433018 -0.20719399439689412 QKS(ph)FSEDVISHK ddPTM_A549_MK2206_60min_R1 2 QKSFSEDVISHK 12 1 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-8;H0YC82;Q03001-10;A0A494C1D7;F6QMI7 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 QKS(0.838)FS(0.159)EDVIS(0.003)HK;QKS(0.796)FS(0.203)EDVIS(0.002)HK 92.575 0.00011246 69757000.0 2807.9 3401.5 3529.9 2677.07 4258.8 3230.9 2215.19 3112.6000000000004 4806.4 3950.1 4263.6 True False 3281.804873436027 3574.6218210188113 4030.492898708504 3332.952270178241 3632.336161598244 3572.7916935021544 2617.661349116198 3553.820581937721 3717.758074243623 3057.7696665364056 3204.830450626249 1.0240182511978868 1.1153856268185114 1.2576306175326417 1.0399777216067565 1.1333941740626114 1.1148145739828461 0.8167862198777743 1.108895037253305 1.1600482869591882 0.954112772467852 1.0 11.646032318725762 -7.569502938757172 24.99999838645008 1.0586611515385673 1.1186232574279602 0.12900972921440623 0.10460519187816641 282.1880532492425 151308.69612236152 0.016526043911011194 0.02451209367873358 2.6946170985196342e-08 7.569502938757172 0.05996210588939288 QKS(ph)LDSDLSDGPVTVQEFMEVK ddPTM_A549_PD325901_60min_R1 1 QKSLDSDLSDGPVTVQEFMEVK 22 1 R4GNG3;Q14161-11;Q14161-7;Q14161-9;Q14161-6;Q14161-5;Q14161-3;Q14161;Q14161-2 R4GNG3 GIT2 ARF GTPase-activating protein GIT2 1 QKS(0.942)LDS(0.046)DLS(0.011)DGPVTVQEFMEVK 51.956 0.0021303 1048000.0 1127.9 916.52 1272.3 955.14 951.43 1046.8 1074.3 1733.9 1581.9 1089.5 1212.7 True False 1242.403577683905 993.7583569272198 1358.645928961424 1014.1368285196726 884.6048390553132 1038.2752078654335 1115.1830743795174 1699.316004281765 1515.4182442054337 1020.7087840647671 1063.545587938681 1.1681714369121488 0.9343824733016666 1.2774684455178777 0.9535433553772055 0.8317507487100924 0.9762394951755425 1.0485522078474492 1.5977838877365917 1.424873800795463 0.9597226443701973 1.0 10.05466615912989 -8.032281863486824 24.971094914332962 1.2401765786361734 1.0186084344983746 0.2183471576043171 0.19903203154348215 827.1345669770645 639814.3084334694 0.03538034129124978 0.04569679551149088 9.283636695807685e-09 8.032281863486824 -0.2215681441377988 QKS(ph)LTLTPTR ddPTM_A549_MK2206_60min_R1 2 QKSLTLTPTR 10 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802;A0A2R8Y4W8;A0A2R8YG73 Q3V6T2 CCDC88A Girdin 1 QKS(0.992)LT(0.008)LTPTR;QKS(1)LTLTPTR 98.531 0.00013734 102969000.0 2019.1100000000001 2748.7 2303.0699999999997 2663.44 4407.4 3172.7 3318.8999999999996 3462.38 5089.4 5538.4 5645.1 True False 2359.886405499988 2888.5970893530525 2629.679957004048 3315.982919566364 3759.0772984474775 3508.433008132185 3921.90116946255 3953.1829680940423 3936.6590261017623 4287.271593414145 4243.265873165921 0.5561486072375817 0.6807485497480402 0.6197301879276377 0.7814695139742194 0.8858924731112386 0.8268237515634452 0.9242647730994996 0.93163687740937 0.9277427207653622 1.0103707195267948 1.0 12.050959362037096 -5.348258194341347 0.32940154401528854 0.9861818708958955 0.23706232534161592 0.9282133781477724 0.03934076760255846 1.0944302583588608 0.08529307344603432 0.012827705632827459 0.3235912660075282 4.484786836065059e-06 5.348258194341347 -0.7491195455542796 down QKS(ph)LTLTPTR ddPTM_A549_PD325901_60min_R1 2 QKSLTLTPTR 10 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802;A0A2R8Y4W8;A0A2R8YG73 Q3V6T2 CCDC88A Girdin 1 QKS(0.986)LT(0.014)LTPTR;QKS(1)LTLTPTR 132.47 2.7605e-07 147011000.0 6187.6 5878.8 6742.4 5459.5 7139.0 5514.0 6094.4 6075.7 6860.0 6242.0 6812.0 True False 6815.760596929631 6374.227107650398 7199.979809344887 5796.720915575887 6637.581268212985 5469.0958121608755 6326.325726983642 5954.515397205557 6571.698056292605 5847.879054733618 5974.167184825838 1.1408720891242228 1.066964969417109 1.2051855240396632 0.970297739624586 1.1110471238689459 0.9154574425121839 1.0589468843544039 0.9967105393919681 1.1000191077652584 0.9788609648533126 1.0 12.544521896154817 -6.264572858153694 24.94846163668244 1.0364265207376606 1.130603269786264 0.3893121312020221 0.06400411796289036 242.15989542899186 1928065.737983236 0.008612462442717695 0.02084796076066467 5.437848975722027e-07 6.264572858153694 0.0941767490486034 QKS(ph)PAQSDSTTQR ddPTM_A549_MK2206_60min_R1 4 QKSPAQSDSTTQR 13 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 QKS(0.692)PAQS(0.048)DS(0.073)T(0.073)T(0.114)QR;QKS(0.993)PAQS(0.007)DSTTQR;QKS(0.979)PAQS(0.004)DS(0.005)T(0.005)T(0.007)QR;QKS(0.649)PAQS(0.33)DS(0.012)T(0.008)TQR 153.21 4.6783999999999997e-14 528055800.0 6237.870000000001 7303.98 7661.3099999999995 6615.13 8766.04 7430.0599999999995 6548.360000000001 6889.780000000001 9288.26 10235.91 9332.0 True False 7290.669954720747 7675.721384179032 8747.798960255082 8235.837146964468 7476.567128302971 8216.30401752534 7738.112248655213 7866.4274140663265 7184.4839403033675 7923.610821851759 7014.606849902459 1.0393554636382976 1.0942482662853394 1.2470832859829806 1.1740981815793412 1.065856902358959 1.171313545197418 1.1031426870007426 1.121435253948083 1.024217621035065 1.1295873013841027 1.0 12.776146531544944 -8.771522058143018 2.5909998995756114 1.0094151846441632 1.1319915040050337 0.13458127991971325 0.06501323487117286 0.16492985907464058 2.177332096715138 0.009904662368175315 0.010706062580417567 1.6923022889488932e-09 8.771522058143018 0.12257631936087043 QKS(ph)PAQSDSTTQR ddPTM_A549_PD325901_60min_R1 4 QKSPAQSDSTTQR 13 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 QKS(1)PAQSDSTTQR;QKS(0.967)PAQS(0.03)DS(0.002)TTQR;QKS(0.994)PAQS(0.005)DS(0.001)TTQR;QKS(0.851)PAQS(0.013)DS(0.082)T(0.021)T(0.032)QR 160.45 3.9914e-19 739694800.0 15398.900000000001 15401.800000000001 15550.5 12522.0 17949.1 13148.900000000001 17763.5 15128.0 15859.6 15131.300000000001 14972.4 True False 16962.184991928967 16699.763738621805 16605.850442752988 13295.455500474638 16688.417137033444 13041.819717903898 18439.499713060177 14826.260172313585 15193.07616524464 14175.907135676189 13130.889717863527 1.291777279101908 1.2717922469414322 1.264640157640046 1.0125327214032749 1.270928131726686 0.9932167582034859 1.4042841048291426 1.1291131439588318 1.1570484934144007 1.0795846618368137 1.0 13.68067705267758 -14.999999989058535 0.1286237136213556 0.30592359299313865 1.2860193639777637 0.2329590624246164 0.11636430804462135 62.107285388985275 0.5479935366059322 11.012648299565925 0.32900528585931993 1.0000000251936536e-15 14.999999989058535 0.9800957709846251 QKS(ph)PDGVHR ddPTM_A549_MK2206_60min_R1 2 QKSPDGVHR 9 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 QKS(1)PDGVHR;QKS(1)PDGVHR 68.536 0.0018627 55937000.0 2837.6000000000004 3053.9 2611.2 2346.93 3183.8 2234.11 2271.4 2195.89 3728.1000000000004 3494.8 4211.4 True False 3316.517507340743 3209.3304657384538 2981.5074243201343 2921.9279553576926 2715.4672375543564 2470.522037317806 2684.0839785221715 2507.164132131085 2883.691302552359 2705.322252755988 3165.593151272956 1.0476764855291327 1.0138164673650212 0.9418479513456122 0.9230270018061921 0.8578067704191253 0.7804294232581194 0.8478929067188691 0.7920045351130791 0.9109481745601964 0.8546020045779151 1.0 11.62826013383337 -5.736907802879559 2.1987187493860905 0.9158125406479694 1.046594895562688 0.33659450443760075 0.0691273396518857 0.40330828502605465 3.6324809268112546 0.012159446166330084 0.07037697013564319 1.8327034488347078e-06 5.736907802879559 0.13078235491471868 QKS(ph)PDGVHR ddPTM_A549_PD325901_60min_R1 2 QKSPDGVHR 9 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 QKS(1)PDGVHR;QKS(1)PDGVHR 63.091 0.0019195 52054900.0 4925.91 4763.8 3834.26 4072.66 5059.2 3865.47 4477.38 4907.9 4618.49 4863.120000000001 5404.599999999999 True False 5425.984756936718 5165.262144557554 4094.475940878431 4324.218958518047 4703.859245292498 3833.990893912493 4647.769146016349 4810.008084326935 4424.390926531607 4556.061773254747 4739.868462582169 1.1447542900759675 1.0897479930790401 0.863837461566994 0.9123077977067562 0.9924029078920781 0.8088812852464317 0.9805692252236792 1.0147977992002242 0.9334417107687631 0.9612211413083628 1.0 12.210631307706818 -5.605710451867835 6.302271836809628 0.9539854665170201 1.131508660859259 0.5605470221344913 0.06005519895262808 0.10598545363403353 6.269344325406777 0.008335700328983658 0.03332156811367243 2.4790743284740646e-06 5.605710451867835 0.17752319434223895 QKS(ph)PEIHR ddPTM_A549_MK2206_60min_R1 13 QKSPEIHR 8 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR 91.855 0.0010597999999999998 7847152700.0 37619.63000000001 43603.86 40606.34999999999 40770.83 55905.810000000005 46122.189999999995 41605.16 41783.27999999999 63502.1 67146.33999999998 64213.340000000004 True False 43968.903832351665 45823.11022685561 46364.94102310883 50759.6851802721 47682.139406978706 51002.809532368075 49164.279026085926 47706.18789592833 49118.97574201611 51977.935158841545 48267.39547997382 0.9109441973224844 0.9493594956012834 0.9605851022631972 1.051635056657083 0.9878747119629039 1.0566720873416338 1.018581560848549 0.9883729466140692 1.017642971069272 1.0768746612898812 1.0 15.558761360268107 -5.935337083667261 2.571973244992899 1.0120837998364849 0.926625562341511 0.5913050990336011 0.03032066115799758 0.11682717512771287 1.5285973099577208 0.0030501662456435454 0.01202199786261661 1.1605474891943961e-06 5.935337083667261 -0.08545823749497383 QKS(ph)PEIHR ddPTM_A549_PD325901_60min_R1 16 QKSPEIHR 8 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR 105.65 0.00054864 13048898800.0 36425.58000000001 39602.93 39677.869999999995 31994.46 46876.16000000001 31741.980000000003 39000.37 40632.92 39293.06 42309.90999999999 39023.80999999999 True False 40123.478066505275 42940.407897594916 42370.648860615125 33970.68512950932 43583.74023557292 31483.48383889992 40484.55042217137 39822.46453469092 37641.70933349691 39638.455061945555 34224.1287623133 1.1723739805084001 1.254682279739426 1.2380344041737172 0.9925945921205431 1.2734799047263454 0.9199206810362603 1.1829242083366598 1.1635786205474528 1.0998588041471768 1.1582020199034069 1.0 15.062726195063636 -2.000000004927022 0.019171929460064095 2.0171952603692294e-08 2.573723605496264 0.0451612085804316 0.1082860801765661 2251.0849117687967 3.236139145082422 161.9474250197924 290.03892036745594 0.009999999886551128 2.000000004927022 2.5737235853243114 QKS(ph)PEIHRR ddPTM_A549_MK2206_60min_R1 3 QKSPEIHRR 9 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR 65.574 0.0011830999999999999 962627100.0 3242.2700000000004 3156.87 2648.71 2668.68 3654.3599999999997 2555.44 3103.04 2218.6000000000004 4344.21 4541.87 4841.01 True False 3789.4859101091324 3317.541198918026 3024.3369063537784 3322.5067198015954 3116.808484901421 2825.8549646362144 3666.8222015996485 2533.0933441775423 3360.253371277857 3515.8584125342923 3638.8536119209534 1.0413955366862533 0.9116995495640985 0.8311235429878226 0.9130641334174588 0.8565358261983107 0.7765783584639568 1.0076860991569074 0.6961240034166476 0.9234373595765444 0.9661994648579084 1.0 11.829268298577666 -9.601411322859153 1.4334681998842973 0.9818041136066605 0.8794052333246497 0.1433801086807337 0.09264121098565638 0.4244995127680258 1.771960107973067 0.021742357313669095 0.01646703902342005 2.503736825860093e-10 9.601411322859153 -0.10239888028201083 QKS(ph)PEIHRR ddPTM_A549_PD325901_60min_R1 4 QKSPEIHRR 9 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR 86.911 0.00023869 1526282000.0 17423.36 16829.19 18530.55 15037.41 19206.15 16897.71 19297.52 20305.429999999997 19518.350000000002 18869.09 19700.68 True False 19192.166680800292 18247.444903347452 19788.14455624939 15966.236663264035 17857.176281620516 16760.100652177895 20031.897683608127 19900.422269348328 18698.061626390492 17677.69243718095 17277.621252899975 1.110810707091925 1.0561317808888013 1.1453049159141646 0.9240992396788517 1.0335436817509391 0.9700467678306575 1.1594129417697392 1.1518033633251525 1.0822127278228246 1.0231554551650925 1.0 14.076616983458475 -10.721836254816653 1.1201972135802516 1.0021762811964876 1.0689124503201155 0.0898789143526092 0.070981186590547 0.867311442239621 2.0244949636502207 0.04173160854051469 0.012324307685202972 1.8974211847674876e-11 10.721836254816653 0.0667361691236279 QKS(ph)VSDPVEDKKEQES(ph)DEEEEEEEEDEPSGATTR ddPTM_A549_PD325901_60min_R1 3 QKSVSDPVEDKKEQESDEEEEEEEEDEPSGATTR 34 3 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 QKS(0.807)VS(0.202)DPVEDKKEQES(0.991)DEEEEEEEEDEPSGATTR;QKS(0.732)VS(0.269)DPVEDKKEQES(1)DEEEEEEEEDEPSGATTR;QKS(0.779)VS(0.222)DPVEDKKEQES(0.999)DEEEEEEEEDEPSGATTR 134.61 4.3942999999999996e-30 126190000.0 8907.199999999999 8377.740000000002 10050.8 9203.84 11371.199999999999 8158.6 9921.699999999999 10203.6 10370.3 11249.8 12839.0 True False 9811.452386865922 9083.761551481086 10732.907728370255 9772.34029336276 10572.526140510368 8092.15906657521 10299.27572286256 10000.081193430655 9934.472354689677 10539.485708097118 11259.88439312667 0.8713635099890626 0.8067366621477974 0.9531987499731264 0.8678899313858014 0.9389551234614911 0.718671594134206 0.914687519274133 0.8881157962452055 0.8822890189488927 0.9360207742923807 1.0 13.458904394683485 -10.493226189512379 0.5535440559205954 1.0150941478024853 0.8669239441198077 0.23890231101155912 0.06356146401803003 0.8902296558840654 0.4258221491065033 0.06610350887588999 0.013459376902817963 3.2119872338159634e-11 10.493226189512379 -0.14817020368267764 QKS(ph)YTLVVAK ddPTM_A549_MK2206_60min_R1 2 QKSYTLVVAK 10 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 QKS(0.991)YT(0.009)LVVAK;QKS(0.75)YT(0.25)LVVAK 97.69 0.00014225 52811000.0 5510.9 6633.2 6722.799999999999 6001.0 8564.7 7174.2 5720.3 6417.4 9342.3 9128.6 8548.8 True False 6441.005191430822 6970.801547312063 7676.194129985985 7471.245269395127 7304.843975589483 7933.369082151455 6759.604465237464 7327.086102463247 7226.283966587512 7066.442919911954 6425.897025122819 1.0023511373196514 1.0847982032794603 1.194571606108062 1.1626774036660397 1.1367819849945175 1.2345932484032955 1.051931650757859 1.1402433113722676 1.124556453104599 1.0996819420362391 1.0 12.649682146496158 -10.537628240811552 0.6478459965924037 0.9903402895536834 1.1314458972906685 0.09196924127517736 0.06741227501106305 0.7511754316590491 0.5108054439113522 0.05804119354844311 0.012744224688455184 2.8998247963880225e-11 10.537628240811552 0.1411056077369851 QKS(ph)YTLVVAK ddPTM_A549_PD325901_60min_R1 2 QKSYTLVVAK 10 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 QKS(0.989)YT(0.011)LVVAK;QKS(0.797)YT(0.203)LVVAK 123.02 8.9295e-06 105325000.0 9367.8 9898.599999999999 10049.2 8462.6 12685.2 11813.7 12199.0 11726.1 11964.7 12530.8 11578.5 True False 10318.812159790128 10732.789761139724 10731.199142748677 8985.315582040936 11794.235313564286 11717.493144019745 12663.239620548942 11492.213736552501 11461.865267365038 11739.603149480294 10154.417902158832 1.0161894319512246 1.0569576576967479 1.0568010147058475 0.8848676180769215 1.1614880761463273 1.153930560759037 1.2470670148267913 1.1317452016731806 1.1287565055726378 1.156107938691833 1.0 13.309819919652387 -6.79266224860557 24.99991842893316 1.094866377801437 1.0113000639873473 0.3301793900112612 0.07776123573178721 282.1172682299511 225888.4852916969 0.013340999163723052 0.025213944580878295 1.6118987236255045e-07 6.79266224860557 -0.08356631381408963 QKSDAEEDGGT(ph)VSQEEEDR ddPTM_A549_MK2206_60min_R1 1 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGT(0.5)VS(0.5)QEEEDR 227.51 2.8975e-75 254330000.0 5039.7 5518.1 4740.1 4242.5 7250.2 6023.6 5249.2 6933.9 7317.6 6407.9 6935.0 True False 5890.278151164764 5798.94772028926 5412.317456349519 5281.912690453064 6183.705184281863 6661.013353857928 6202.911693254636 7916.80155917816 5660.175283805999 4960.350939520173 5212.848103736986 1.1299539203803275 1.112433664839018 1.0382649462717968 1.0132489160132188 1.1862431172412042 1.277806915011159 1.1899275731452628 1.5187094274822173 1.0858124332739205 0.9515625318075539 1.0 12.34785610677171 -8.986713890337855 22.72248524858906 1.0378577900980799 1.1819440160058385 0.2539067399145152 0.1308014845686597 32.58529437890069 55731.87685878968 0.024339470678652934 0.024508979017193143 1.0310651540592662e-09 8.986713890337855 0.14408622590775866 QKSDAEEDGGT(ph)VSQEEEDR ddPTM_A549_PD325901_60min_R1 1 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGT(0.529)VS(0.471)QEEEDR 228.95 2.3129999999999994e-75 234560000.0 12489.0 12633.0 12695.0 10187.0 14548.0 9402.7 12004.0 12539.0 14098.0 13729.0 11084.0 True False 13756.874086084126 13697.627245517351 13556.559041236553 10816.227853644392 13526.198667875415 9326.127528655246 12460.818788840848 12288.89980834479 13505.510087115625 12862.148596994202 9720.738267265053 1.415208774050723 1.4091138830107812 1.3946017955126688 1.1126961302999425 1.391478537533038 0.9594052706944417 1.2818798784865053 1.2641940838720158 1.3893502443735093 1.3231658175910328 1.0 13.246850171957691 -10.903495121221505 1.0895953881638931 0.9956771995677414 1.2925587196788704 0.0 0.16485032040325698 0.444796822783588 0.9151959342728035 0.10281564354670536 0.02306967887493642 1.2488344736715956e-11 10.903495121221505 0.296881520111129 QKSDAEEDGGT(ph)VSQEEEDRKPK ddPTM_A549_MK2206_60min_R1 2 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKS(0.021)DAEEDGGT(0.866)VS(0.112)QEEEDRKPK;QKSDAEEDGGT(0.992)VS(0.008)QEEEDRKPK 195.39 6.795199999999999e-61 2469600000.0 9289.099999999999 10355.1 10185.0 10534.0 13529.7 8852.3 8541.099999999999 8617.9 13527.7 16572.2 17238.5 True False 10856.872983309448 10882.13035979183 11629.386150697212 13114.830472889236 11539.499052685209 9789.04451031883 10092.907312210853 9839.513716211872 10463.697549297913 12828.528510107246 12957.704691603463 0.8378700735744236 0.8398192904367857 0.8974881298408509 1.012126050486981 0.8905511683842243 0.7554613060955224 0.7789116631706395 0.7593562247631584 0.8075270889664852 0.9900309364528177 1.0 13.661522563565617 -10.77062157148323 1.0682424235432604 0.9982176721492216 0.842033806237523 0.4116318318490998 0.0702212925122386 0.450246841386741 0.9283317429330978 0.051142890125390535 0.013568493670601487 1.6958148285967924e-11 10.77062157148323 -0.15618386591169864 QKSDAEEDGGT(ph)VSQEEEDRKPK ddPTM_A549_PD325901_60min_R1 1 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKS(0.022)DAEEDGGT(0.843)VS(0.135)QEEEDRKPK 150.17 7.109099999999999e-28 2833400000.0 6967.7 7483.0 8279.3 8158.3 10105.0 8538.7 7795.1 8911.9 8604.6 9726.2 10369.0 True False 7675.055774650367 8113.618671590787 8841.183085475372 8662.21966215638 9395.259660357504 8469.163658196967 8091.74679614239 8734.145163249696 8242.97858530253 9112.08607211632 9093.67873450662 0.843999001804057 0.89222622752254 0.9722339378371554 0.9525539569906909 1.0331637981344681 0.9313242644101901 0.8898210539853 0.9604633524282479 0.9064514841528272 1.002024190445595 1.0 13.150648321478082 QKSDAEEDGGTVS(ph)QEEEDR ddPTM_A549_MK2206_60min_R1 1 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGT(0.007)VS(0.993)QEEEDR 319.88 8.292199999999996e-184 230330000.0 12724.0 12013.0 10130.0 9492.3 16703.0 16222.0 13475.0 12905.0 17177.0 16276.0 16241.0 True False 14871.50012806725 12624.41038832839 11566.586323668414 11817.913926125531 14246.010826330301 17938.60127270789 15923.233076774804 14734.323269904993 13286.436926032531 12599.240295827074 12207.911471202939 1.2181854499147877 1.0341171311823423 0.947466431989834 0.9680537046818068 1.1669490608557413 1.4694242594257823 1.304337200866494 1.206948731948259 1.0883464347995733 1.032055345875274 1.0 13.575528784799832 -4.263639885578268 16.40403197401233 1.0975585038226119 1.0874738592574902 0.0 0.15655113008931607 0.0 0.0 0.022549551763134206 0.0 5.44954338470834e-05 4.263639885578268 -0.010084644565121703 QKSDAEEDGGTVS(ph)QEEEDR ddPTM_A549_PD325901_60min_R1 1 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGT(0.094)VS(0.906)QEEEDR 250.71 1.3625e-97 254610000.0 17399.0 18540.0 16018.0 13880.0 20481.0 14211.0 18931.0 16386.0 18119.0 17776.0 15761.0 True False 19165.333671533175 20102.430866135648 17105.07780405885 14737.336076232868 19042.485215614248 14095.270327642034 19651.42956444069 16059.16837543167 17357.52144051979 16653.620326328863 13822.496917210812 1.386531954850345 1.454327028360954 1.237481035916224 1.0661847974719358 1.3776443814506385 1.0197340185398474 1.4216989652551193 1.1618138511165743 1.2557442801023462 1.2048199703769102 1.0 13.754730629479408 -14.999999999999995 0.15499238498498916 0.020138383893334548 1.3461304893458472 0.14406405646388332 0.14306468001351663 45.48405421291626 0.459459706529659 13.642013710288866 0.21942296432456102 1.0000000000000123e-15 14.999999999999995 1.3259921054525128 QKSDAEEDGGTVS(ph)QEEEDRKPK ddPTM_A549_MK2206_60min_R1 5 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGTVS(1)QEEEDRKPK;QKSDAEEDGGT(0.001)VS(0.999)QEEEDRKPK;QKSDAEEDGGT(0.007)VS(0.993)QEEEDRKPK;QKSDAEEDGGT(0.005)VS(0.995)QEEEDRKPK;QKSDAEEDGGT(0.025)VS(0.975)QEEEDRKPK 286.34 3.911899999999999e-140 1109841800.0 37479.6 40357.57 38959.0 34562.4 53885.100000000006 35902.84999999999 36367.7 33702.93 55244.200000000004 60119.600000000006 55653.2 True False 43805.240191756435 42411.59793188128 44483.97202209255 43030.18955156511 45958.673171160335 39702.06575661697 42975.24033886626 38480.42353839433 42731.47690685956 46538.54060512446 41832.974489819106 1.0471461980887187 1.013831754713091 1.0633710025309966 1.0286189322262362 1.0986231252177705 0.9490615056856467 1.0273053939620083 0.9198586523594997 1.0214783296669263 1.1124846170441585 1.0 15.352352962497786 -7.261003503466871 24.999997708495837 1.0004677222202984 1.0478108163480047 0.16660141858946065 0.04972423105099387 37.51319007069723 2151572.285501382 0.005209303327013833 0.008686792276612136 5.4827254197164495e-08 7.261003503466871 0.04734309412770621 QKSDAEEDGGTVS(ph)QEEEDRKPK ddPTM_A549_PD325901_60min_R1 4 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGT(0.001)VS(0.999)QEEEDRKPK;QKSDAEEDGGT(0.004)VS(0.996)QEEEDRKPK;QKSDAEEDGGT(0.001)VS(0.999)QEEEDRKPK;QKSDAEEDGGT(0.006)VS(0.994)QEEEDRKPK 297.14 5.926299999999998e-157 4308196900.0 48298.94 48874.170000000006 49544.61 40109.700000000004 60689.2 44307.6 52026.7 54534.75 53444.4 54712.700000000004 53587.54 True False 53202.212832999605 52992.96782981456 52907.00517054267 42587.18507326204 56426.59995837392 43946.77359573795 54006.60453860263 53447.01162956627 51198.31772590739 51258.13078467221 46996.61229940429 1.13204357144002 1.1275912291764545 1.125762104585 0.906175636702262 1.2006524980756785 0.9351051372759266 1.149159522276613 1.1372524319214332 1.0894044319563936 1.0906771419633143 1.0 15.520269144956801 -10.539996913175255 0.8953770140092218 1.0011186938143795 1.0873371413875772 0.0 0.08931934966308357 0.9173531041408917 1.3435762447971022 0.04934807569516597 0.014677224335130442 2.8840520019628072e-11 10.539996913175255 0.08621844757319774 QKSDAEEDGGTVSQEEEDRKPK ddPTM_A549_MK2206_60min_R1 2 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 0 ; 139.26 3.5825999999999996e-23 25365000.0 2400.4 2844.2 2775.8 2126.16 3160.0 2881.0 2437.1000000000004 2507.1000000000004 3766.6 4104.8 3821.2 False True 2805.528835854498 2988.957631439572 3169.4501793917857 2647.069295446949 2695.1681860266885 3185.8655077469753 2879.8895236666312 2862.489102671738 2913.471114024226 3177.522829092587 2872.290580245102 0.976756618968229 1.0406181226916515 1.103457359499235 0.9215882660524779 0.9383340963353022 1.1091724248439776 1.0026456039906941 0.9965875745160409 1.0143371753757624 1.1062678863158193 1.0 11.487985993945747 -11.091868906495787 0.5364465637025437 0.9958310292318493 1.0129705114223064 0.0 0.0640272016947727 14.527660394610573 4.561427319452673 0.13457547869761985 0.012317377294306136 8.093401648347589e-12 11.091868906495787 0.017139482190457134 QKSDAEEDGGTVSQEEEDRKPK ddPTM_A549_PD325901_60min_R1 2 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 0 ; 152.07 4.2441999999999995e-28 47126000.0 5486.200000000001 5877.4 6283.2 5548.6 7860.3 5402.700000000001 6880.9 7021.5 6373.700000000001 7209.8 7083.200000000001 False True 6043.154985273023 6372.709124737094 6709.615735950971 5891.324420215108 7308.219644562904 5358.702202459476 7142.756414872957 6881.450674239805 6105.835554138804 6754.571997567838 6212.011304104281 0.9728177701930943 1.025868887348392 1.0801035940674997 0.9483763199726801 1.1764659281502525 0.8626356167315692 1.1498299126007274 1.107765317441265 0.9829079915074643 1.0873405837341419 1.0 12.600844739686778 QKSDT(ph)VLFPAK ddPTM_A549_MK2206_60min_R1 1 QKSDTVLFPAK 11 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 QKS(0.267)DT(0.733)VLFPAK 94.725 0.00011357 3256700.0 2902.3 2730.1 2644.2 2176.8 4050.6 2763.3 2742.8 3004.9 3742.1 3092.9 3451.3 True False 3392.1372855776167 2869.0504288000748 3019.187320537413 2710.1160977202667 3454.762105797373 3055.710571869914 3241.1312566217393 3430.8537771202996 2894.5203249057645 2394.2117418876614 2594.2469589657485 1.3075614385339644 1.105928030053038 1.1638010445008196 1.0446638814990505 1.3317013223655034 1.177879600594439 1.2493533992283776 1.3224854192324396 1.1157458679491818 0.9228927622380888 1.0 11.341100107935713 -9.413489038010795 1.3668774679755782 1.0299669770279674 1.2042511603038935 0.47281463140951485 0.09440259778799791 0.25943347743566814 1.000129722159513 0.0210965393343238 0.01720007597501889 3.859321527516567e-10 9.413489038010795 0.1742841832759261 QKSDT(ph)VLFPAK ddPTM_A549_PD325901_60min_R1 1 QKSDTVLFPAK 11 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 QKS(0.011)DT(0.989)VLFPAK 119.01 5.7828e-06 9718600.0 4743.4 5508.2 5098.9 5089.5 5694.8 5303.1 5741.2 5981.0 6300.6 5835.2 5536.2 True False 5224.946476093482 5972.3953450295785 5444.942016176535 5403.866855906857 5294.816893993464 5259.913311837202 5959.684507705185 5861.704262996268 6035.807692926701 5466.764476158536 4855.2824968633 1.0761364512711666 1.230081946598983 1.121447005337831 1.112987114425981 1.0905270491292978 1.0833382640938625 1.2274640067916482 1.2072838741686307 1.2431424323561122 1.1259415862393747 1.0 12.24533952365712 -10.998059980725444 1.3013141834045412 1.0007732691402806 1.1637235749148513 0.11429963704102541 0.07036712616148703 0.3249056009390055 0.9868190502188892 0.046027319332615196 0.010717615222645699 1.0044770516448505e-11 10.998059980725444 0.1629503057745707 QKSFS(ph)EDVISHK ddPTM_A549_PD325901_60min_R1 2 QKSFSEDVISHK 12 1 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-8;H0YC82;Q03001-10;A0A494C1D7;F6QMI7 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 QKS(0.429)FS(0.571)EDVISHK;QKS(0.116)FS(0.884)EDVISHK 135.72 1.4634e-08 79358000.0 6386.4 5812.3 6599.5 5165.1 7162.5 5478.0 6615.4 6145.9 7181.3 6878.4 6576.7 True False 7034.742626580807 6302.122919268626 7047.381756017385 5484.1364962067955 6659.430709283584 5433.38898422511 6867.152667085785 6023.315203134724 6879.494934643452 6444.0966501249095 5767.807593136243 1.2196562581165558 1.0926375087075069 1.2218475811162373 0.9508182108454832 1.154586140704205 0.9420198050106431 1.1906001641347703 1.0442989135599006 1.1927400183789296 1.1172523608092368 1.0 12.493807323537276 -11.093673685427037 1.436397791180244 1.0002194543560436 1.1177410396382368 0.0 0.10033990316311979 0.5679338255412232 2.100267248398329 0.06333745630382366 0.013960467220293796 8.059838034358898e-12 11.093673685427037 0.11752158528219314 QKSPEIHR ddPTM_A549_MK2206_60min_R1 2 QKSPEIHR 8 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 0 ; 83.005 0.01223 4625500.0 386.25 623.31 733.69 466.15999999999997 766.5300000000001 588.12 323.53999999999996 556.9 666.85 672.65 747.8399999999999 False True 451.43955709415053 655.0338166277337 837.7382744138481 580.3692209267175 653.774452416151 650.3544680375393 382.32303003040573 635.842280434722 515.8095397406295 520.6978978242862 562.1306886659937 0.8030864818383656 1.16526962472412 1.490290943556036 1.032445359466152 1.163029284111208 1.156945317433054 0.6801319297078514 1.131128922962123 0.917597188946773 0.9262933127881121 1.0 9.134761768568845 QKSQT(ph)PPRR ddPTM_A549_MK2206_60min_R1 1 QKSQTPPRR 9 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QKS(0.02)QT(0.98)PPRR 57.348 0.0047228 16010000.0 737.56 800.75 656.95 775.11 1182.1 636.98 612.01 628.9 1202.3 1253.9 1268.7 True False 862.0420963892863 841.5047547202157 750.1153884831158 965.01198479601 1008.2146559184013 704.3848008068964 723.2042950142446 718.0485009254743 929.980969678577 970.6431191286292 953.6467756613005 0.9039427578324359 0.8824071723376609 0.7865757087711568 1.0119176296976713 1.0572202220463243 0.7386223272431715 0.758356567097648 0.7529501690262078 0.9751838871721529 1.0178224725350147 1.0 9.897311190423341 -8.929396186038256 12.76632346040102 0.9890610601523345 0.8636700839092705 0.2734885697315629 0.0987601997830764 0.8823666170974221 157.53946251378733 0.018029489889462128 0.01918309296024474 1.1765321898939688e-09 8.929396186038256 -0.12539097624306406 QKSQT(ph)PPRR ddPTM_A549_PD325901_60min_R1 2 QKSQTPPRR 9 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QKS(0.002)QT(0.998)PPRR;QKSQT(1)PPRR 83.397 0.00049621 44756000.0 2550.7 2635.7 2352.8500000000004 2770.8 3017.5 2057.83 2634.6000000000004 3353.9 2779.6 3258.4 2928.7 True False 2809.645186273903 2857.819688989953 2512.5285498364265 2941.946023056627 2805.561209809874 2041.0717147513622 2734.8611447084395 3287.003833416348 2662.7830783193767 3052.664067917978 2568.4884665589284 1.0938905207692284 1.1126464946983583 0.9782128993565337 1.1453997404932985 1.092300489699515 0.794658703484793 1.0647745474880037 1.2797424929923993 1.0367121024634296 1.1885060445716982 1.0 11.326703880139602 -9.102661291533423 5.234097621300331 1.0149770464666585 1.0675756502241975 0.0 0.12343685435248063 0.5042663823193064 25.71075774701147 0.020689176673659444 0.020472733664640606 7.894755935958792e-10 9.102661291533423 0.052598603757539 QKSVS(ph)DPVEDKKEQES(ph)DEEEEEEEEDEPSGATTR ddPTM_A549_PD325901_60min_R1 1 QKSVSDPVEDKKEQESDEEEEEEEEDEPSGATTR 34 3 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 QKS(0.454)VS(0.549)DPVEDKKEQES(0.997)DEEEEEEEEDEPSGATTR 89.48 2.1547e-09 11424000.0 1172.8 787.82 1297.6 1091.9 1231.4 1038.9 1223.7 1326.1 1224.8 1267.6 1550.0 True False 1291.861792630272 854.2123562545308 1385.6629391026834 1159.3441831151779 1144.9107120993804 1030.4395428461974 1270.268573134333 1299.649895194675 1173.3259153567315 1187.5635196700305 1359.3598262595492 0.9503457198562307 0.6283931154600945 1.0193496323306173 0.8528604132029268 0.8422425688787253 0.758032952674188 0.9344608753295571 0.9560749627056631 0.8631459402366527 0.8736196971023941 1.0 10.408711676637875 -14.999999999571198 0.17666681580239846 1.5763565696888062 0.8296928152228117 0.018315574749650843 0.10695840673886522 56.86191212951325 0.6246375401704264 11.32615495921146 0.1123167712814321 1.0000000009873528e-15 14.999999999571198 -0.7466637544659945 QKT(ph)PPPVAPK ddPTM_A549_MK2206_60min_R1 2 QKTPPPVAPK 10 1 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 QKT(1)PPPVAPK;QKT(1)PPPVAPK 54.7 0.0073893 14571300.0 3916.5 4569.1 4307.7 4183.1 5660.6 4838.1 4461.7 4163.6 6169.3 6282.3 6269.700000000001 True False 4577.509450768264 4801.647673795987 4918.59663439945 5207.959687786495 4827.933238551478 5350.06453072914 5272.333136819751 4753.803050490231 4771.963400347706 4863.124066753159 4712.760455082881 0.9713011077894392 1.0188609668495325 1.0436763508942126 1.1050762578372775 1.0244384972600038 1.135229465134156 1.1187356512324642 1.0087088227374434 1.012562264903783 1.0319056343099522 1.0 12.202356637127838 -8.47006552472421 24.898458339616628 1.0061797051453871 1.0609529115827232 0.18604295813334093 0.0457109794722443 344.807633237615 162557.55564633667 0.007573325934683409 0.009155676556978508 3.3879303645897877e-09 8.47006552472421 0.054773206437336075 QKT(ph)PPPVAPK ddPTM_A549_PD325901_60min_R1 2 QKTPPPVAPK 10 1 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 QKT(1)PPPVAPK;QKT(1)PPPVAPK 65.563 0.0021784 22006500.0 7077.5 7521.9 7969.3 9384.1 10184.9 8310.6 8808.3 8482.8 10204.9 9104.1 9054.0 True False 7796.002589819875 8155.796911110347 8510.14462129393 9963.734544162597 9469.547759997538 8242.921228970647 9143.504676586703 8313.603899372138 9776.023541495688 8529.265572284578 7940.415398034806 0.9818129403846212 1.0271247160606793 1.071750556450753 1.2548127578600672 1.1925758647766944 1.0380969780259492 1.1515146523505122 1.0469986118647765 1.231172810419362 1.0741586106937815 1.0 12.954998767724113 -5.804146116062593 3.252928571557563 1.1195957895954722 0.9979316304297899 0.25682879418884974 0.07784811209700132 0.3103161461826346 6.581109196268983 0.013387798545756918 0.054020103033773054 1.569834553010533e-06 5.804146116062593 -0.1216641591656823 QKT(ph)PPPVAPKPAVK ddPTM_A549_PD325901_60min_R1 2 QKTPPPVAPKPAVK 14 2 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 QKT(1)PPPVAPKPAVK;QKT(1)PPPVAPKPAVK 43.408 0.024234000000000002 23687000.0 4413.9 4522.8 4159.5 4530.1 5970.0 5160.0 4929.700000000001 4969.5 5314.5 5278.5 5077.0 True False 4861.995878658559 4903.952228767982 4441.78868310543 4809.913988396431 5550.687795381921 5117.978670792545 5117.302431135351 4870.379424002667 5091.15004667158 4945.214609165556 4452.561185754664 1.091954871774435 1.1013778416919862 0.9975806053640097 1.0802578084238497 1.2466280784957111 1.1494460058554141 1.1492941292996561 1.0938377308738068 1.143420569482569 1.1106449530636584 1.0 12.120419721205897 -10.802307671278477 0.9561144208981152 0.9972065292777009 1.1185173217696769 0.022803424202345823 0.06596343080967423 0.5560128843589258 0.8677650801647377 0.04776489165207527 0.010862053829489744 1.5764940236739974e-11 10.802307671278477 0.12131079249197596 QKT(ph)VDIDDAQILPR ddPTM_A549_MK2206_60min_R1 2 QKTVDIDDAQILPR 14 1 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 QKT(1)VDIDDAQILPR;QKT(1)VDIDDAQILPR 161.08 1.3170000000000001e-19 19153800.0 5527.2 10580.7 6278.4 3921.9 10719.7 7128.7 4599.7 7842.700000000001 9207.599999999999 9011.7 9611.3 True False 6460.056232934084 11119.212436176314 7168.771527593259 4882.765676060782 9142.846330300728 7883.054302351918 5435.405950518812 8954.426742261432 7122.093301515812 6975.9507111025305 7224.548951614607 0.8941812528642819 1.5390874240932775 0.9922794593275082 0.6758575114879024 1.265524864117282 1.0911482993813948 0.7523522903535809 1.239444400229334 0.9858184018428032 0.9655897908399502 1.0 12.818691803682785 -5.899334466723146 19.529838028778983 0.9969036117036957 1.2289761751501833 0.1336350874382518 0.21577799804525388 3.334736661077747 638.5604009683537 0.02609327384369359 0.08112836961788464 1.2608561272491493e-06 5.899334466723146 0.23207256344648763 QKT(ph)VDIDDAQILPR ddPTM_A549_PD325901_60min_R1 1 QKTVDIDDAQILPR 14 1 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 QKT(1)VDIDDAQILPR 172.84 4.6497e-23 21861000.0 5454.0 5954.6 6146.6 4156.8 7997.2 5441.8 6100.0 5983.2 4800.5 5442.1 6170.8 True False 6007.68606497741 6456.415039670518 6563.745238508438 4413.556095222244 7435.504260842264 5397.4837850230415 6332.138838048077 5863.860382270405 4598.751679188432 5098.484877245401 5411.830719924145 1.1101023620083994 1.1930186611160325 1.2128511733272467 0.8155384607603 1.3739351146863816 0.9973489682801266 1.1700548604995595 1.083526201342934 0.849758966454311 0.9420998440462793 1.0 12.40190099771167 -8.631216674184497 5.961899180061641 0.9294140963426064 1.1236359365366777 0.28314318177736664 0.13495430696217953 0.18529913113214486 9.193498000805139 0.021874789938733204 0.024799622417339236 2.3376706586587456e-09 8.631216674184497 0.1942218401940713 QKTENGAS(ph)A ddPTM_A549_PD325901_60min_R1 2 QKTENGASA 9 1 P20962 P20962 PTMS Parathymosin 1 QKTENGAS(1)A;QKT(0.001)ENGAS(0.999)A 49.448 0.025093 24769000.0 6626.0 6231.200000000001 4953.9 4985.4 5975.0 4346.4 3339.3 4349.799999999999 5596.4 6679.799999999999 7780.700000000001 True False 7298.666642196608 6756.325092398304 5290.101444220699 5293.336835335105 5555.336612630984 4311.004359444329 3466.3788888350746 4263.039826647913 5361.20277000524 6258.0362880181965 6823.723225921078 1.0696017995676286 0.9901229678737921 0.7752514674284188 0.7757256061071559 0.8141210346175954 0.6317671770549314 0.5079893738461494 0.6247380917288715 0.7856711933508376 0.9170999586041205 1.0 12.736343415977005 -5.636868126457375 4.256348397660978 0.8148693698681949 1.0525164658123662 0.3063290716446241 0.13929075243451064 0.26215960462718874 8.159805439641534 0.02433946173715411 0.10620143122174676 2.3074477389828037e-06 5.636868126457375 0.23764709594417133 QKVDSLLENLEK ddPTM_A549_MK2206_60min_R1 2 QKVDSLLENLEK 12 1 G3V4C1;G3V2Q1;G3V576;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;A0A0G2JNQ3;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 130.88 7.0106e-08 10767600.0 2929.7400000000002 2947.55 2847.38 2875.3 4113.4 3109.81 3296.2 3147.1 4267.4 4335.5 4311.3 False True 3424.2084867340263 3097.5677049960327 3251.181299732179 3579.7486290771226 3508.3243089880298 3438.8880300751903 3895.076873296112 3593.211062589539 3300.8407136374944 3356.107538864481 3240.685224173221 1.0566310054404087 0.955837266109762 1.003238844513705 1.1046270715757052 1.0825871895296744 1.0611607706985908 1.201930025243301 1.1087812650814477 1.0185625833127994 1.0356166386757626 1.0 11.662083179560746 -4.23678502077845 12.792845105176408 1.037892194807073 1.048053928087199 0.0 0.06676003332878998 0.0 0.0 0.009664419870355049 0.0 5.7971558923981294e-05 4.23678502077845 0.01016173328012604 QKVDSLLENLEK ddPTM_A549_PD325901_60min_R1 2 QKVDSLLENLEK 12 1 G3V4C1;G3V2Q1;G3V576;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;A0A0G2JNQ3;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 151.54 2.2807e-12 20239400.0 7680.4 7647.7 7844.0 6828.9 9584.5 6573.4 9504.2 9297.6 8111.3 9814.5 8683.8 False True 8460.108553988352 8292.198518605484 8376.34100980383 7250.705643442831 8911.317784729985 6519.868409803823 9865.887531897793 9112.152074173899 7770.410268805567 9194.81079504695 7615.747651143654 1.1108703887684488 1.0888226472892977 1.099871134588599 0.9520674759166942 1.1701172613553936 0.8561035250196002 1.2954588287095143 1.1964881836395314 1.0203082644996369 1.2073418416990442 1.0 12.894769960199332 -8.967616772503364 24.976955864549463 1.0089594557740587 1.0933948869380927 0.0 0.1255638547767076 289.2212555361031 223076.01116041766 0.01835027106201375 0.01939682534065874 1.0774155207402403e-09 8.967616772503364 0.08443543116403407 QLAEDFLR ddPTM_A549_PD325901_60min_R1 2 QLAEDFLR 8 0 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ; 93.551 0.0070834 2198100.0 1159.07 1582.74 1363.54 1153.3899999999999 1407.08 1199.15 1470.97 1327.51 1707.4899999999998 1685.7199999999998 1488.58 False True 1276.7379331377635 1716.1230544265131 1456.0780240321137 1224.632280761255 1308.2515549624773 1189.3845199769157 1526.9485682956692 1301.0317716385514 1635.7301332564225 1579.283351513225 1305.4940968860892 0.9779729653187128 1.3145391147458043 1.1153463102630663 0.9380603739858275 1.0021121949788707 0.9110608181330562 1.169632686917391 0.9965818878398749 1.252958659221841 1.2097207909864836 1.0 10.350380218825734 QLAELETEDGMQES(ph)P ddPTM_A549_MK2206_60min_R1 2 QLAELETEDGMQESP 15 0 Q96QG7-2;Q96QG7 Q96QG7-2 MTMR9 Myotubularin-related protein 9 1 QLAELETEDGMQES(1)P;QLAELETEDGMQES(1)P 134.81 5.4085e-10 3173800.0 1431.9499999999998 1421.5 1227.1100000000001 1111.6399999999999 1915.58 1465.31 1383.4250000000002 1493.37 1952.26 1890.3200000000002 2051.7999999999997 True False 1673.6281521837377 1493.8482782825931 1401.1326499147817 1383.9918499034163 1633.8007195534813 1620.368131605943 1634.7754151567472 1705.0597707538168 1510.0762271186043 1463.2953991157422 1542.281433200801 1.0851639111743334 0.9685964222381311 0.9084805274527077 0.8973666025604188 1.0593401984764506 1.0506306415445095 1.0599721814480947 1.1055438612232988 0.9791184634730646 0.948786238111462 1.0 10.590850334763099 -5.248557239084863 23.36671164489495 0.9977384014892914 1.0851640527146615 0.13699498928572107 0.06304852764505095 1322.7140816710985 2399142.631670988 0.00876781255401317 0.20231398998184394 5.6421257443261745e-06 5.248557239084863 0.08742565122537016 QLAELETEDGMQES(ph)P ddPTM_A549_PD325901_60min_R1 1 QLAELETEDGMQESP 15 0 Q96QG7-2;Q96QG7 Q96QG7-2 MTMR9 Myotubularin-related protein 9 1 QLAELET(0.001)EDGMQES(0.999)P 54.09 0.0058778 820340.0 244.87 475.59 422.73 352.34 492.69 450.4 426.66 542.19 236.55 220.69 405.95 True False 269.7290221362337 515.6696383832499 451.4189998819953 374.10324157780167 458.0851540882277 446.73209172964425 442.89677977731066 531.3755951101732 226.60862612478363 206.755595736809 356.02072352907356 0.7576216897222472 1.448425904176724 1.267957088023645 1.0507906333920234 1.2866811503202265 1.254792382031556 1.24401966095421 1.4925411921050145 0.6365040323454041 0.5807403391783872 1.0 8.475817410917106 -8.767406308226189 24.99999152187717 0.8283491284677499 1.2320385333438233 0.4932415124294074 0.2142902852510664 97.546067171951 408693.34211129596 0.03635168103035913 0.03919454019617534 1.708416242549534e-09 8.767406308226189 0.4036894048760734 QLAEPAS(ph)EPDVLK ddPTM_A549_MK2206_60min_R1 1 QLAEPASEPDVLK 13 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 QLAEPAS(1)EPDVLK 157.68 1.9961000000000005e-18 4337700.0 2894.0 3791.2 2934.2 2420.3 4109.8 3276.2 2228.1 2891.2 4679.6 4793.1 4703.9 True False 3382.4364484931325 3984.155886475532 3350.313681234735 3013.2736086513964 3505.2538642191416 3622.8853094344495 2632.916929006449 3301.0364539286556 3619.678071785636 3710.3353810474755 3535.7918089644454 0.9566277177059734 1.1268072617777805 0.9475426897988 0.8522203148419865 0.9913631948951633 1.02463196510869 0.7446470469022247 0.9336060017898666 1.0237248874802272 1.0493647764103369 1.0 11.787817614533678 -8.76208704346042 24.992659350595734 1.011203420861777 0.9473183666964214 0.11912556036895727 0.09158515458561806 32.42716181192043 1251313.1435782479 0.01580833453405456 0.017321602094259866 1.7294696955567658e-09 8.76208704346042 -0.06388505416535561 QLDDLKVELS(ph)QLR ddPTM_A549_PD325901_60min_R1 2 QLDDLKVELSQLR 13 1 F2Z388;P42766 F2Z388 RPL35 60S ribosomal protein L35 1 QLDDLKVELS(1)QLR;QLDDLKVELS(1)QLR 58.98 0.0028801 3807500.0 1203.2199999999998 1137.78 993.91 877.3299999999999 1497.6399999999999 958.51 1402.62 1479.5700000000002 1461.42 1546.9 1327.73 True False 1325.3700086362517 1233.6647136392573 1061.3627094663584 931.5206815390035 1392.4509329775178 950.7042123529775 1455.9974716431143 1450.0588156497888 1400.001599624948 1449.2284700043945 1164.4276271739302 1.1382158733668397 1.0594601887223905 0.911488773280216 0.7999816045242824 1.19582436940027 0.8164562486896157 1.2503975667228242 1.2452975022321366 1.202308814179166 1.244584408841 1.0 10.185405258979468 -7.772978911209671 24.999866824486237 1.1221350151832512 0.9877743482967364 0.29778277811733933 0.13798908096451684 302.66766790998463 655714.5682363018 0.022402943376970165 0.031095637055199184 1.686634924257319e-08 7.772978911209671 -0.13436066688651482 QLDDLKVELSQLR ddPTM_A549_MK2206_60min_R1 2 QLDDLKVELSQLR 13 1 F2Z388;P42766 F2Z388 RPL35 60S ribosomal protein L35 0 ; 92.935 0.00017909 7945300.0 1861.52 1486.17 1927.35 1759.8000000000002 2732.2 1613.8400000000001 1749.69 1586.75 3035.0 2458.5 2664.71 False True 2175.6990662055746 1561.8097050546908 2200.67721134475 2190.9510790004247 2330.2969993234537 1784.615477619708 2067.5860246457964 1811.6766717180737 2347.5773458990943 1903.1231424975945 2002.9889647453488 1.0862261872132597 0.7797395455212867 1.0986966229364796 1.0938408136856472 1.163409804217128 0.8909761905985318 1.0322503323969436 0.9044865965841217 1.1720370841871088 0.9501416013739992 1.0 10.967938757459729 -8.766927777138344 24.998734835322395 1.0812397226691197 1.006926388454324 0.0 0.11869584384888382 276.07015824159214 1257448.4960609903 0.020353671610627063 0.021973048522068953 1.7102997130608153e-09 8.766927777138344 -0.07431333421479569 QLDDLKVELSQLR ddPTM_A549_PD325901_60min_R1 2 QLDDLKVELSQLR 13 1 F2Z388;P42766 F2Z388 RPL35 60S ribosomal protein L35 0 ; 90.444 0.00018682 15896800.0 2830.7 2540.3999999999996 2764.2 1975.73 3159.6 2390.2 2855.3 2830.6 2814.3999999999996 2778.5 2231.0 False True 3118.0705801487975 2754.488423534575 2951.7952344849214 2097.76635489161 2937.680596028261 2370.7350036682833 2963.9600039801135 2774.141462437257 2696.120555339637 2603.0650358182224 1956.6011434742286 1.593615842732368 1.407792504221674 1.5086341149957532 1.0721481799641197 1.5014202592215518 1.2116598273364494 1.5148514115233385 1.4178369831223583 1.3779612489402335 1.3304014691497643 1.0 10.934133974720416 -10.572595946237296 0.6253979263963854 0.9617112923204908 1.401555252512684 0.11674046665749649 0.1704647708924323 0.5821701360357058 0.35751006815263964 0.13880915146661355 0.028327901604538762 2.6754944459620832e-11 10.572595946237296 0.4398439601921932 QLDRQS(ph)PGPPKGEGSCPCESGGGGEAPTLAPGPPGGTTSSSSTLAR ddPTM_A549_MK2206_60min_R1 1 QLDRQSPGPPKGEGSCPCESGGGGEAPTLAPGPPGGTTSSSSTLAR 46 2 Q24JP5-4;Q24JP5;Q24JP5-2 Q24JP5-4 TMEM132A Transmembrane protein 132A 1 QLDRQS(0.566)PGPPKGEGS(0.211)CPCES(0.211)GGGGEAPT(0.012)LAPGPPGGTTSSSSTLAR 47.138999999999996 0.0011253 10390000.0 362.85 214.7 301.0 216.55 0.0 437.17 265.89 0.0 230.49 361.75 428.07 True False 424.0902091692235 225.6273129421546 343.68632610307907 269.60475972129893 0.0 483.43103923004037 314.19877126409267 0.0 178.28438301689687 280.0304237537137 321.76840486902546 1.3179982955189393 0.701210278970663 1.068117070857144 0.8378845021500494 0.0 1.502419230461173 0.9764749009213195 0.0 0.5540767220121156 0.8702856449429799 1.0 8.329878861465033 QLDRQS(ph)PGPPKGEGSCPCESGGGGEAPTLAPGPPGGTTSSSSTLAR ddPTM_A549_PD325901_60min_R1 1 QLDRQSPGPPKGEGSCPCESGGGGEAPTLAPGPPGGTTSSSSTLAR 46 2 Q24JP5-4;Q24JP5;Q24JP5-2 Q24JP5-4 TMEM132A Transmembrane protein 132A 1 QLDRQS(0.877)PGPPKGEGS(0.061)CPCES(0.061)GGGGEAPT(0.001)LAPGPPGGTTSSSSTLAR 70.791 6.046e-06 11119000.0 360.26 286.95 281.64 319.28 306.97 0.0 277.36 339.34 262.52 375.18 411.03 True False 396.83332999060525 311.13228355111255 300.75378403890227 339.00120046250896 285.40948618900984 0.0 287.9150865772155 332.57159749291964 251.48719733789142 351.4910707713806 360.4759157338465 1.1008594823394606 0.8631153149794166 0.8343242111657762 0.94042676824159 0.7917574343572481 0.0 0.798708246544256 0.9225903395401048 0.6976532588201378 0.975075047817897 1.0 8.493759062522216 -10.856212792789318 0.9806178919606623 1.0071932943399529 0.7599331443622156 0.08742067328133163 0.26558450606527717 1.2121642623236049 1.9661303655910494 0.21919892929081522 0.047335357067118264 1.3924743602272125e-11 10.856212792789318 -0.24726014997773726 QLEAIDQLHLEYAK ddPTM_A549_MK2206_60min_R1 2 QLEAIDQLHLEYAK 14 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 0 ; 110.77 1.1254000000000001e-05 5863900.0 1304.09 1392.16 1360.1399999999999 1290.3899999999999 2196.52 1663.35 1206.08 1078.8799999999999 2190.48 1991.0299999999997 2161.7400000000002 False True 1524.18851006061 1463.014997603866 1553.0283042718995 1606.5356079278079 1873.4148177124493 1839.36459295763 1425.2091242476095 1231.8145439314292 1694.3397774777748 1541.2549401696108 1624.92029701116 0.9380081674554539 0.9003610825065704 0.9557566036491162 0.988685790240193 1.152927205819488 1.1319721935536862 0.8770947885069227 0.7580769014930762 1.0427217757045089 0.9485111011318885 1.0 10.666153239771315 -6.130092916734784 3.115968987210833 1.0074407681731679 0.9208574309937261 0.03588986505710123 0.10519723228376102 0.4967955377099484 9.0833743079495 0.015451690833930953 0.04701404633132423 7.411516559122634e-07 6.130092916734784 -0.08658333717944178 QLEAIDQLHLEYAK ddPTM_A549_PD325901_60min_R1 2 QLEAIDQLHLEYAK 14 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 0 ; 123.29 1.4063999999999998e-06 17331700.0 2692.3 2587.9 2511.3 2654.6 2868.7 2471.9 3015.5 3364.4 3253.3 3528.3 2826.0 False True 2965.620314033493 2805.9914152358415 2681.7319196736794 2818.5686129659753 2667.212408477742 2451.7696659558346 3130.2565026449174 3297.2944026792575 3116.5751146555 3305.5225358565535 2478.4199154899916 1.1965770188895453 1.1321694914161018 1.0820329125476271 1.1372441753514295 1.0761745383854477 0.9892470806227813 1.2630049020672334 1.3304018346815825 1.2574846962684056 1.3337217455352157 1.0 11.275204926810215 -7.764310377650449 24.999988228823007 1.1533033199560194 1.1030889552982301 0.09690156448582388 0.11085814478961617 250.9861443317049 2185536.930065601 0.020040634293435305 0.02834725768173508 1.720638445155201e-08 7.764310377650449 -0.05021436465778928 QLEDELVSLQK ddPTM_A549_PD325901_60min_R1 1 QLEDELVSLQK 11 0 P09493-9;P09493-3;A0A0S2Z4G6;P09493-4;P09493-10;P09493;H0YKP3;A0A087WTJ7 P09493-9 TPM1 Tropomyosin alpha-1 chain 0 158.31 7.9224e-13 1250000.0 1556.6 1894.0 1722.2 1739.8 1934.6 1613.2 1796.9 1999.7 1573.1 1762.3 1807.5 False True 1714.6248860916442 2053.6140269935777 1839.0788484299019 1847.2634946275164 1798.7203700076825 1600.062634054756 1865.2820128014084 1959.8144147656967 1506.988077602609 1651.0280772440008 1585.188958686539 1.0816533112319642 1.2955010919929493 1.1601638015153295 1.1653270006107839 1.1347040743319787 1.0093829037142303 1.1766937957648593 1.2363285802782564 0.9506677859094314 1.0415339245183834 1.0 10.630439108314755 -8.77192443057028 24.999890623205843 0.9767042182019999 1.157367879626535 0.47932274722002177 0.07344116085113503 107.0786196128042 255310.69998171745 0.01235620977821648 0.013221707053770347 1.6907351024820425e-09 8.77192443057028 0.18066366142453505 QLEDGR ddPTM_A549_MK2206_60min_R1 1 QLEDGR 6 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;A0A2R8Y422;M0R1M6;P62987;M0R2S1 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 112.59 0.060427 32859000.0 7090.5 8598.8 7231.3 7587.9 6875.6 6492.1 6292.4 6387.3 7600.8 9262.1 9219.9 False True 8287.203053918643 9036.442191555658 8256.80707624318 9446.93584063377 5864.208348052247 7179.089712892797 7435.64762985512 7292.719335285868 5879.230935983472 7169.785177192178 6930.344373705069 1.1957851741627346 1.303895117512701 1.1913992481486115 1.3631264669151344 0.8461640622509428 1.035892204741154 1.0729117095634177 1.0522881608821217 0.8483317161395754 1.0345496256139288 1.0 12.758711327340952 -6.761102868608623 24.999986084747665 0.951015983914252 1.261279472662603 0.692723641754137 0.0876955859480051 3.685431122045393 273755.72384314914 0.013523619163767469 0.026835443599796106 1.7333933711144354e-07 6.761102868608623 0.3102634887483511 QLEDPNGS(ph)FSNAEMSELSVAQKPEK ddPTM_A549_MK2206_60min_R1 1 QLEDPNGSFSNAEMSELSVAQKPEK 25 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;G3V411 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 QLEDPNGS(0.673)FS(0.314)NAEMS(0.012)ELS(0.001)VAQKPEK 66.87899999999999 5.5765e-05 3227300.0 662.52 982.17 741.14 617.66 1255.0 1005.6 1021.2 776.54 1164.7 986.37 1062.3 True False 774.3371789411439 1032.1582578127432 846.2447964386583 768.986727727811 1070.3911624884468 1112.0119245367446 1206.738821373092 886.616923054011 900.897309643715 763.5483319362834 798.5015920115076 0.9697378022634983 1.29261891039269 1.059790994663994 0.9630371879292743 1.3404997224764716 1.392623303023695 1.5112541207753798 1.1103508520509418 1.1282348321614013 0.9562264365845867 1.0 9.641151473785456 -9.378783606383456 1.155725888360238 1.0319823577399332 1.2121230860219248 0.19745909918619053 0.1672007512443804 0.5570725404889093 1.5513392296713677 0.043762874657780816 0.03502166661641226 4.180386086509721e-10 9.378783606383456 0.18014072828199157 QLEEAEEESQR ddPTM_A549_PD325901_60min_R1 2 QLEEAEEESQR 11 0 P35749-3;P35749-2;P35749;P35749-4 P35749-3 MYH11 Myosin-11 0 ; 77.37899999999999 0.0031764 1847490.0 1072.03 1090.78 905.38 992.8900000000001 1190.22 1065.66 1255.3 1276.24 1089.77 1457.47 1200.79 False True 1180.8616964132248 1182.7038586927429 966.8245312922214 1054.2185602832026 1106.6230532360914 1056.981618278447 1303.0711284265167 1250.7843920090886 1043.9707566772584 1365.4450954666145 1053.1004424349699 1.1213191532640956 1.123068428267018 0.9180743757516026 1.0010617390356873 1.050823842289314 1.003685475465667 1.2373664238651032 1.1877161395137539 0.9913306600302988 1.2965953108038242 1.0 10.040427328710532 QLEEPGAGTPS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 QLEEPGAGTPSPVR 14 0 Q96P11-2;Q63ZY6;Q96P11-5;Q96P11;Q96P11-4;Q63ZY6-4;Q63ZY6-5 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 1 QLEEPGAGTPS(1)PVR;QLEEPGAGT(0.001)PS(0.999)PVR 247.02 2.4677999999999997e-58 131237000.0 10487.8 11389.2 10909.9 9978.4 15245.800000000001 11871.5 11202.599999999999 11431.8 14545.4 15810.300000000001 15533.8 True False 12257.88423790817 11968.861632793609 12457.087870936813 12423.108447947396 13003.163015989136 13127.734250336076 13237.967411196838 13052.292658419197 11250.890124230871 12238.742249269766 11676.32874893001 1.0498063647815203 1.0250534984200754 1.0668668327858062 1.063956720907316 1.1136345417801563 1.12430324056601 1.13374397859515 1.1178421693218665 0.9635640076733772 1.0481669806009268 1.0 13.511299115387004 -8.76528740023649 24.99992667514752 0.9827941097659597 1.0871060308878369 0.45595290771105323 0.03853447451547423 47.36659305541067 307732.04516404605 0.0066215339152385765 0.007179887297752153 1.7167719141698142e-09 8.76528740023649 0.10431192112187715 QLEEPGAGTPS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 QLEEPGAGTPSPVR 14 0 Q96P11-2;Q63ZY6;Q96P11-5;Q96P11;Q96P11-4;Q63ZY6-4;Q63ZY6-5 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 1 QLEEPGAGT(0.001)PS(0.999)PVR;QLEEPGAGT(0.011)PS(0.989)PVR 198.98 2.4545999999999997e-31 190295000.0 21002.0 24585.0 21953.0 21960.0 24806.0 18741.0 20725.0 22571.0 23008.0 24442.0 24160.0 True False 23134.107579144773 26656.864231065018 23442.86259411312 23316.41932522143 23063.712136054262 18588.379509558752 21513.701216155165 22120.80369839303 22041.053772475243 22898.72794870217 21188.47316285853 1.0918251353616533 1.258083299640112 1.1063969741437685 1.1004294243387485 1.0885027891713717 0.8772873517919401 1.0153492916076055 1.0440017800418386 1.040237944615623 1.0807162825135301 1.0 14.370992010688717 -6.6085984758354455 1.7165447551468702 1.0127962194586184 1.164513615105563 0.47090621506836094 0.06384160611374162 0.20871478654778122 1.227084065028793 0.008688337254107848 0.02342424420753707 2.4626433730225094e-07 6.6085984758354455 0.15171739564694464 QLEEPGAGTPS(ph)PVRLHALAGFQQR ddPTM_A549_PD325901_60min_R1 1 QLEEPGAGTPSPVRLHALAGFQQR 24 1 Q96P11-2;Q63ZY6;Q96P11-5;Q96P11;Q96P11-4;Q63ZY6-4;Q63ZY6-5 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 1 QLEEPGAGT(0.12)PS(0.88)PVRLHALAGFQQR 75.018 1.3666e-05 4162300.0 1038.7 939.69 1318.5 1258.7 1389.3 2076.8 1674.4 1612.0 1768.7 1701.1 1671.2 True False 1144.148059349474 1018.8809741423418 1407.9813387845927 1336.4470402848917 1291.7203608248083 2059.887229360847 1738.120208266837 1579.847395410464 1694.3676898199317 1593.6922556884583 1465.6529946096505 0.7806404814491554 0.6951720345058223 0.9606512209662441 0.9118441030721802 0.8813275485912913 1.405439921275131 1.1859015842489737 1.0779136679833463 1.1560496898320705 1.0873598740968757 1.0 10.51732785865602 -6.43135091768698 1.2208877811629477 1.101068478101989 0.7582895730392822 0.5616452707139707 0.1261905403610748 0.3209526823325351 0.8865118678122232 0.020605211981370292 0.08007935435856628 3.703813261231249e-07 6.43135091768698 -0.3427789050627068 QLEMENS(ph)PLLSPR ddPTM_A549_MK2206_60min_R1 2 QLEMENSPLLSPR 13 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 QLEMENS(0.997)PLLS(0.003)PR;QLEMENS(1)PLLSPR 74.475 0.00040599 11673100.0 3155.1 4107.0 3788.9 3555.6 4684.3 3897.0 4066.7999999999997 4020.8 7328.299999999999 5729.6 6955.0 True False 3687.6037452110177 4316.028757584674 4326.222993262317 4426.72215961695 3995.245675254688 4309.377953380757 4805.684918488145 4590.76071318357 5668.451750890389 4435.2793806199825 5227.881551765066 0.7053724742416914 0.8255789108549089 0.8275288853477702 0.8467525738264624 0.7642188591487485 0.8243067312658989 0.9192413544384193 0.8781302077575978 1.084273179252995 0.8483894167652897 1.0 12.352010738990346 -8.291044027236262 1.3732050945904697 1.0388684274553632 0.8022069163854785 0.3999579162746121 0.0775587781427056 0.13216874633586898 0.4843844633976094 0.010220342771077185 0.013153369916811904 5.11629965677483e-09 8.291044027236262 -0.23666151106988476 QLEMENS(ph)PLLSPR ddPTM_A549_PD325901_60min_R1 4 QLEMENSPLLSPR 13 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 QLEMENS(1)PLLSPR;QLEMENS(1)PLLSPR;QLEMENS(1)PLLSPR;QLEMENS(1)PLLSPR 191.52 1.0181e-25 88177000.0 24502.0 27137.4 26516.399999999998 25611.899999999998 31449.2 26476.600000000002 26523.9 29236.6 29862.500000000004 28585.2 31212.000000000004 True False 26989.425002580927 29424.36393671359 28315.96236006656 27193.888894154785 29240.316685850103 26260.98334788875 27533.281528934986 28653.453077331014 28607.482974641087 26780.325593619265 27373.121869169718 0.9859827144151596 1.074936358276846 1.0344440248870101 0.9934522274853567 1.0682127097378469 0.95937114785093 1.0058509826000392 1.0467732987958283 1.0450939104195356 0.9783438557580779 1.0 14.740472361140423 -6.034965457065606 24.39113446262125 1.019668549234712 1.0365172244429315 0.02216836100255193 0.03615119501959456 1178.2113064947157 821895.8997498429 0.004637727878679986 0.012279085479453817 9.226448096015022e-07 6.034965457065606 0.016848675208219532 QLEMILNKPGLK ddPTM_A549_MK2206_60min_R1 1 QLEMILNKPGLK 12 1 S4R3Z2;A0A0A0MSS8;P42330;P17516;A6NHU4;Q04828;H0Y804;P42330-2 S4R3Z2;Q04828;P42330-2 AKR1C3;AKR1C4;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1 0 58.273999999999994 0.0037067 6076000.0 1779.8 2100.4 2552.1 2112.2 2943.5 2040.4 2115.2 2487.9 3413.5 3023.1 3246.0 False True 2080.186728067752 2207.301388466241 2914.0261556400924 2629.6890948202613 2510.5150492308703 2256.313773692097 2499.504460407721 2840.5674438742058 2640.347700239391 2340.1796103658644 2439.928614957501 0.8525604869403054 0.9046581834135701 1.194307955477152 1.0777729638070028 1.0289297128779313 0.9247458142259617 1.0244170444516296 1.1642010452521716 1.0821413725193683 0.9591180643646109 1.0 11.252623224108717 -8.005144306472634 24.956148513256107 1.0514229976128455 1.004323211876826 0.05993043393757491 0.09826642149070315 629.2892454348124 3052845.365574111 0.015803164563279543 0.021502950464142606 9.882246748446234e-09 8.005144306472634 -0.047099785736019584 QLEMILNKPGLK ddPTM_A549_PD325901_60min_R1 3 QLEMILNKPGLK 12 1 S4R3Z2;A0A0A0MSS8;P42330;P17516;A6NHU4;Q04828;H0Y804;P42330-2 S4R3Z2;Q04828;P42330-2 AKR1C3;AKR1C4;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1 0 ;; 133.71 4.9592e-08 20060800.0 9585.6 11289.9 11545.6 10247.5 12659.099999999999 12062.6 11476.400000000001 12263.999999999998 12402.599999999999 12629.8 11868.2 False True 10558.723055454242 12241.339494907495 12329.153845332869 10880.464801238919 11769.968487524164 11964.366184942277 11913.140682127056 12019.384899078119 11881.361853203294 11832.35227258484 10408.486638718432 1.0144340308010722 1.1760921563151219 1.1845289592311878 1.0453455126478022 1.1308049763681465 1.1494818219236735 1.1445603088744405 1.1547677694437655 1.1415071437000195 1.1367985263649936 1.0 13.34547270010492 -10.661328534015288 0.8697166770309456 0.9977837969354099 1.129868307678728 0.0 0.06344425977158905 0.4105105779684309 0.5388006322036369 0.03504356051227507 0.008751277235469626 2.181079350104193e-11 10.661328534015288 0.13208451074331806 QLEMWQPRES(ph)GNPEEEK ddPTM_A549_MK2206_60min_R1 1 QLEMWQPRESGNPEEEK 17 1 Q9NU22 Q9NU22 MDN1 Midasin 1 QLEMWQPRES(1)GNPEEEK 41.257 0.038669 54228000.0 5509.9 4592.4 4301.0 3063.7 8224.0 6917.1 5968.7 5713.3 8323.6 7599.3 7371.2 True False 6439.836415878471 4826.133544273641 4910.946473652303 3814.306637534717 7014.260494266928 7649.062930800631 7053.135529895789 6523.177771247431 6438.317890057892 5882.612852056937 5540.727605229426 1.1622726967845254 0.8710288409989078 0.8863360236329384 0.6884125893383956 1.2659457374599605 1.3805159675385097 1.2729619704168327 1.177314287222991 1.1619986306457848 1.0617040344132482 1.0 12.435859727277593 -6.773607024283654 24.999760502671915 1.1353265610608492 0.8986796298602628 0.4439550915147056 0.14676551991580652 203.5989763909824 418316.6206625891 0.023940436423984888 0.04548083261123274 1.6841973346364784e-07 6.773607024283654 -0.23664693120058633 QLES(ph)GGFEAR ddPTM_A549_MK2206_60min_R1 2 QLESGGFEAR 10 0 Q8IYI6 Q8IYI6 EXOC8 Exocyst complex component 8 1 QLES(1)GGFEAR;QLES(1)GGFEAR 105.0 0.00033076 27713000.0 7115.9 8172.599999999999 8492.6 6801.0 10266.7 7402.1 7307.5 8170.1 10799.0 10457.4 10523.4 True False 8316.88995294826 8588.550432003036 9696.97838226914 8467.245305308494 8756.482030215255 8185.38530888368 8635.17816018789 9328.23669488188 8353.043742459407 8095.066077020278 7910.149348935231 1.0514200915900256 1.085763372237608 1.2258906822757312 1.0704279946937099 1.1069932619406164 1.0347952924536752 1.0916580432644112 1.179274408534086 1.0559906487206583 1.0233771475010063 1.0 12.949489218669148 -9.35632602390026 1.430347624190867 1.015161734332227 1.1046447546181253 0.2993178722098021 0.05352878963154367 0.2960282326232591 1.2510718189930579 0.012360240090528817 0.01040569486002331 4.402242640574276e-10 9.35632602390026 0.08948302028589827 QLES(ph)GGFEAR ddPTM_A549_PD325901_60min_R1 2 QLESGGFEAR 10 0 Q8IYI6 Q8IYI6 EXOC8 Exocyst complex component 8 1 QLES(1)GGFEAR;QLES(1)GGFEAR 120.6 4.9963e-05 25945000.0 9917.900000000001 10488.599999999999 9853.400000000001 9481.0 10637.599999999999 10322.9 10322.4 11826.7 10491.3 11941.2 10819.5 True False 10924.757906827914 11372.511131744894 10522.11097730762 10066.61983708672 9890.451673727757 10238.833724946588 10715.22458063402 11590.80719063334 10050.387145478519 11187.230594102057 9488.77009046141 1.1513355053053747 1.1985232040954512 1.1089014568795357 1.0608982767119834 1.0423323127694006 1.0790475085110534 1.1292532623807066 1.2215289315825033 1.0591875500895183 1.1789969076548734 1.0 13.212005385672157 -14.999999999999943 0.10538036444443882 0.5924398967668013 1.1882752173991538 0.0 0.07858056553085728 77.83813363599872 0.5851811542691289 6.7317142284400315 0.35754086797123585 1.0000000000001308e-15 14.999999999999943 0.5958353206323524 QLFHPEQLITGK ddPTM_A549_MK2206_60min_R1 2 QLFHPEQLITGK 12 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;F8VS66;F8VRZ4;F8VWV9;F8VX09;C9JDL2;C9K0S6;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA4A;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ; 113.24 4.005e-05 24776000.0 2241.96 3012.0 2510.17 2630.8 3831.6000000000004 3218.2 3148.2 3092.1 4226.799999999999 3922.2999999999997 3976.3 False True 2620.3480373405873 3165.2979347078235 2866.1498511434093 3275.346118101102 3267.976715689829 3558.747787931732 3720.1871890391376 3530.4146441590997 3269.436548812614 3036.249705844341 2988.8749697028693 0.8767004521440661 1.0590265457047514 0.9589393601928887 1.095845811986813 1.093380201184764 1.1906646561015282 1.2446780901674752 1.181185121474006 1.093868623463241 1.015850357282152 1.0 11.54538683227615 -4.29053821607473 0.8858142132647279 1.0834080574672973 0.04309486688546105 0.38606672091341954 0.08071322084859207 10.384371646579263 1.6810198817673694 0.014438088043038947 15.78076478478344 5.122261945460087e-05 4.29053821607473 -1.0403131905818364 QLFHPEQLITGK ddPTM_A549_PD325901_60min_R1 2 QLFHPEQLITGK 12 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;F8VS66;F8VRZ4;F8VWV9;F8VX09;C9JDL2;C9K0S6;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA4A;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ; 92.85600000000001 0.00028591 47384000.0 5276.5 4979.9 5230.6 5188.0 6503.3 5832.6 5573.6 5531.8 6776.299999999999 5811.6 5389.700000000001 False True 5812.166395646 5399.573649960569 5585.579970152967 5508.450977197123 6046.53064316704 5785.101239392366 5785.706397990949 5421.463909386851 6491.515676218012 5444.6545841861425 4726.801068123287 1.2296194216511933 1.1423314779152314 1.181682894975448 1.1653655184147997 1.2792014210083382 1.223893528840481 1.224021555933194 1.1469625717799397 1.3733422631207497 1.1518687809613848 1.0 12.20664843345613 -11.07256720167238 1.399895904077625 1.0004168427728524 1.2334115535742385 0.2609991131305618 0.07677108968782921 0.2519118890775562 0.8838285763555953 0.054537844825997495 0.012129605423862246 8.461216318726665e-12 11.07256720167238 0.23299471080138612 QLFHPEQLITGKEDAANNYAR ddPTM_A549_MK2206_60min_R1 2 QLFHPEQLITGKEDAANNYAR 21 1 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;F8VS66;F8VRZ4;F8VWV9;F8VX09;C9JDL2;C9K0S6;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 112.54 4.0852e-10 20502500.0 4048.2 4845.5 5083.5 4759.9 7710.0 4980.7 5300.7 4311.200000000001 7371.4 6588.5 8222.400000000001 False True 4731.437191012404 5092.115253196135 5804.41674001662 5926.075713680029 6575.869213375241 5507.754368078918 6263.768576627844 4922.325802496272 5701.789669706944 5100.15327408802 6180.551153304541 0.7655364503346368 0.8238933918496162 0.939142253828477 0.9588264163967882 1.063961619322467 0.8911429145172756 1.0134644016786123 0.796421820708411 0.9225374126477993 0.8251939264932923 1.0 12.593519781478538 -5.674675782024102 2.6244432483663234 0.9561651923102575 0.7706536777238454 0.31324201646468597 0.07686037192640276 0.18691569817116208 2.4315211853594874 0.009236014075018228 0.05126255765179024 2.115067431934293e-06 5.674675782024102 -0.18551151458641213 QLFHPEQLITGKEDAANNYAR ddPTM_A549_PD325901_60min_R1 1 QLFHPEQLITGKEDAANNYAR 21 1 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;F8VS66;F8VRZ4;F8VWV9;F8VX09;C9JDL2;C9K0S6;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 123.99 1.4169e-14 19597000.0 2789.6 2979.8 3284.6 3513.4 3810.2 4295.8 4447.5 4722.3 3951.4 4096.7 3989.4 False True 3072.79813840502 3230.9182036090083 3507.5127079043395 3730.4147384896633 3542.5846964764155 4260.81642906795 4616.752046265381 4628.1100219273185 3785.336399363642 3838.0336628528025 3498.7290908902214 0.8782612367461617 0.9234548087822738 1.0025105164721064 1.0662199448944736 1.01253472459482 1.217818332994688 1.3195511645317723 1.3227974792268744 1.0819175480661454 1.0969793782679664 1.0 11.77261524464988 -5.9100579673445 1.3009661014672766 1.094666035016746 0.869828856957782 0.38889615818229717 0.11000225879635846 0.6570198919803004 1.7888711640066173 0.0198607306319696 0.14267859611453762 1.2301045719624194e-06 5.9100579673445 -0.22483717805896408 QLFQYQEGVREEQRS(ph)PFNDRFPLK ddPTM_A549_MK2206_60min_R1 1 QLFQYQEGVREEQRSPFNDRFPLK 24 3 O94913;E9PKN0 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 QLFQY(0.003)QEGVREEQRS(0.997)PFNDRFPLK 52.402 0.0011895 3229100.0 859.67 1059.5 1250.8 858.6 1490.7 1549.6 1178.9 829.1 1873.5 1589.9 1475.8 True False 1004.7612790864168 1113.4240245096082 1428.182248138642 1068.9570385440186 1271.4200047183497 1713.577643458769 1393.090870071229 946.6274640122607 1449.1552413647285 1230.7404857664942 1109.318129992076 0.9057467392997481 1.0037012777547967 1.2874415458700237 0.9636163059479199 1.1461274907022674 1.544712555514629 1.2558082595126971 0.8533417406772417 1.3063477483912393 1.1094567486923572 1.0 10.115457445242647 -5.566658883042689 6.9066339109791945 1.157126574507136 0.9289029586038692 0.17349876882346815 0.18005622914805794 0.23482454087269422 28.210375445884722 0.025961586283167123 0.10408552699925647 2.7123211903550697e-06 5.566658883042689 -0.22822361590326679 QLFQYQEGVREEQRS(ph)PFNDRFPLK ddPTM_A549_PD325901_60min_R1 1 QLFQYQEGVREEQRSPFNDRFPLK 24 3 O94913;E9PKN0 O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 QLFQYQEGVREEQRS(1)PFNDRFPLK 94.19200000000001 2.9468999999999997e-08 6127000.0 1622.4 1746.0 1678.4 1604.3 2076.5 2113.6 1836.8 2109.8 1876.7 1720.2 1792.5 True False 1787.104853652245 1893.141547587534 1792.306317039104 1703.393967370345 1930.6538035361066 2096.387542361846 1906.7004291355272 2067.7183838939186 1797.8288254000481 1611.5862784288306 1572.0338635937044 1.1368106597696843 1.2042625743823165 1.1401194074419312 1.0835606069428738 1.2281248185853892 1.3335511345598228 1.2128876312987098 1.315314149255709 1.1436323777976203 1.025160027243121 1.0 10.618416580065542 -9.831039211395531 0.9712810687159369 1.020592134313755 1.2030983811943352 0.4987869309687568 0.07210364013056222 0.2963017847710162 0.5742774049415305 0.026249164659112062 0.015325203355595679 1.475573301326537e-10 9.831039211395531 0.18250624688058026 QLGAQS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 QLGAQSPGR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QLGAQS(1)PGR 90.306 0.0010655 19265000.0 4264.7 4494.8 3281.5 3985.5 5060.8 4185.9 3915.5 4279.6 6441.1 4241.7 5078.2 True False 4984.477098095599 4723.566121156946 3746.8660435456927 4961.947678915893 4316.36302400122 4628.849159624458 4626.895666947064 4886.246405725327 4982.201134323114 3283.497024011408 3817.1427888099756 1.3058136344041635 1.2374612065873372 0.9815891756865107 1.2999114661002293 1.1307837465904387 1.2126476308913605 1.2121358625909655 1.2800795453734266 1.3052173863992012 0.8601975890545777 1.0 11.898277439477292 -10.925672345938157 1.1890972828722655 1.0003329932961944 1.2210647968431185 0.51996397395687 0.1013989374136006 0.35465169140894476 0.8931539085953429 0.06356661775772235 0.015088310603023201 1.1866636905628362e-11 10.925672345938157 0.22073180354692412 QLGAQS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 QLGAQSPGR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QLGAQS(1)PGR;QLGAQS(1)PGR 79.86 0.0017192 41894000.0 16104.1 18154.2 19165.5 18635.3 20922.6 16314.3 17503.4 18668.2 19043.7 19889.5 18783.8 True False 17738.976376788174 19684.118146170436 20466.18608151391 19786.360157162988 19453.068755051565 16181.44174978893 18169.501465227993 18295.848106080408 18243.35951525065 18633.673575636694 16473.511680318792 1.076818150314681 1.1948950854047358 1.2423693550395354 1.2011015344592324 1.1808695761142722 0.982270329714896 1.102952534822034 1.110622219544045 1.1074359777852543 1.1311294117027086 1.0 14.007860508611866 -7.229888098916533 19.739600718097822 1.0569783414239566 1.1848074972916522 0.4423822174854283 0.05817004534243613 33.402765982561085 20897.34027720404 0.0089831017718084 0.015554965966665031 5.8899539740034945e-08 7.229888098916533 0.1278291558676956 QLGDSSGEGPEFVEEEEEVALRS(ph)DSEGSDYTPGKK ddPTM_A549_PD325901_60min_R1 2 QLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKK 35 2 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;F5H6N4 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 QLGDS(0.005)S(0.004)GEGPEFVEEEEEVALRS(0.765)DS(0.179)EGS(0.044)DY(0.003)T(0.001)PGKK;QLGDS(0.003)S(0.004)GEGPEFVEEEEEVALRS(0.712)DS(0.172)EGS(0.08)DY(0.012)T(0.018)PGKK 54.703 0.00080536 8524300.0 2057.19 2408.8 2008.8899999999999 2499.9 3298.0 2502.4 2607.4 2691.7 2833.5 2850.3999999999996 3209.0 True False 2266.0344143767643 2611.7980296843352 2145.2253558369207 2654.313145315167 3066.3598574823422 2482.021284068075 2706.6260338240254 2638.0119319022006 2714.4178487616746 2670.4252575476935 2814.3133435270256 0.8051819885616812 0.9280409502699906 0.762255333355463 0.9431476958385383 1.0895587957663024 0.8819278385531488 0.9617358493677746 0.9373554433694025 0.9645044873929506 0.9488727556544911 1.0 11.458567250758081 -6.465702491099678 8.528630113144763 0.9775071852208441 0.8428676763181706 0.49190347095474596 0.060471412367140015 0.21825360112424175 30.643427139984862 0.007744638291330009 0.01797693515442356 3.4221379222041177e-07 6.465702491099678 -0.1346395089026735 QLGPRS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QLGPRSPR 8 1 Q9NXG0-2;Q9NXG0;Q9NXG0-3 Q9NXG0-2 CNTLN Centlein 1 QLGPRS(1)PR;QLGPRS(1)PR 63.623999999999995 0.0027337 112035000.0 3743.1000000000004 4017.1000000000004 4452.5 3420.7 3995.5 4028.4 4004.9 3948.3 4379.0 3887.0 3859.3 True False 4123.096756475418 4355.635115013674 4754.673425057565 3631.988870026637 3714.8698637267116 3995.594046011762 4157.308661065371 3869.54805911857 4194.9658583827 3641.5741566404304 3384.6305661183715 1.2181822139613745 1.2868864208151642 1.4047835745070436 1.073082807436779 1.0975702639201395 1.1805111275686635 1.2282902313421866 1.1432704348458098 1.239416171553888 1.0759148112335144 1.0 11.724782656271687 -14.39800617157353 0.26083514566186944 1.8553197468893055e-10 1.231209013882353 0.34451965370734305 0.08868505861980569 23.12955063918555 0.3987092438616637 11.949631225453608 0.043522031652683875 3.999390663573338e-15 14.39800617157353 1.231209013696821 QLHHEAQQS(ph)EGEQNYR ddPTM_A549_PD325901_60min_R1 1 QLHHEAQQSEGEQNYR 16 0 A0A2R8Y6S3;C9J167;P54278 A0A2R8Y6S3 PMS2 Mismatch repair endonuclease PMS2 1 QLHHEAQQS(1)EGEQNYR 75.334 0.00015775 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QLHLEGAS(ph)LELS(ph)DDDTESK ddPTM_A549_PD325901_60min_R1 2 QLHLEGASLELSDDDTESK 19 0 P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35580-2;P35580-5 MYH10 Myosin-10 2 QLHLEGAS(1)LELS(0.996)DDDT(0.004)ESK;QLHLEGAS(1)LELS(0.998)DDDT(0.002)ESK 105.03 5.8199e-10 13073900.0 2381.4 2423.6 2270.3 2208.57 3098.1 2376.9 2321.8999999999996 2857.2 2729.1 2507.4 2740.8999999999996 True False 2623.157974905976 2627.8452776249396 2424.37621042295 2344.9883528736045 2880.500143864777 2357.5433144586823 2410.2611750924316 2800.210904569962 2614.405417700897 2349.08233608444 2403.7866759966423 1.091260718390653 1.0932106845693366 1.0085654582546395 0.9755392923547763 1.198317709565672 0.9807622856055699 1.0026934582675082 1.1649165595815432 1.087619564501051 0.9772424315108906 1.0 11.231093154447672 -10.850498043714252 1.173246101634347 1.0010544514545745 1.0670026638725836 0.15348915945266206 0.06918157435531344 0.833913918504995 2.0887091502904704 0.04280536536231587 0.011170031784549329 1.4109185919468989e-11 10.850498043714252 0.06594821241800908 QLHLEGASLELS(ph)DDDTESK ddPTM_A549_MK2206_60min_R1 2 QLHLEGASLELSDDDTESK 19 0 P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35580-2;P35580-5 MYH10 Myosin-10 1 QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(1)DDDTESK 151.94 7.918600000000001e-22 82056000.0 8469.6 8747.7 8461.7 7505.9 11032.3 8344.1 7356.7 8891.9 13079.099999999999 12287.9 14349.0 True False 9899.061418160823 9192.920565552336 9661.696297629322 9344.84583695265 9409.463284399433 9227.06712363469 8693.31716333278 10152.35405530168 10116.704733030918 9512.054855682816 10785.747287746513 0.917790965620617 0.8523211531199366 0.8957836707898575 0.866406896772851 0.8723979000592151 0.8554870494803256 0.8060004496127121 0.94127497932717 0.9379697542630465 0.8819096722662216 1.0 13.396838516268208 -8.96723519787916 1.0230896574372226 0.9823627240389904 0.8685193289721569 0.2432678547772933 0.04412947620515624 0.18856451266630958 0.40392331670829024 0.007751645484586114 0.007394475753420358 1.0783625626592595e-09 8.96723519787916 -0.1138433950668335 QLHLEGASLELS(ph)DDDTESK ddPTM_A549_PD325901_60min_R1 2 QLHLEGASLELSDDDTESK 19 0 P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35580-2;P35580-5 MYH10 Myosin-10 1 QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(1)DDDTESK 260.06 2.0610999999999996e-98 569760000.0 7698.3 8546.8 8572.5 9174.6 10784.2 9401.2 9702.6 9919.2 9418.1 10110.2 12158.3 True False 8479.825748811072 9267.06883099721 9154.281400630201 9741.294204971611 10026.754995470303 9324.639744157932 10071.837752466441 9721.35377453814 9022.290009324983 9471.840246582477 10662.906177813851 0.7952640309688664 0.869094098406217 0.8585165477379307 0.9135684064481573 0.9403397936983466 0.8744932749722182 0.9445677927301623 0.9116983318080032 0.8461379907944352 0.8882981889393712 1.0 13.38031307814405 -10.910535836416864 1.0621483607477598 1.0026978179465451 0.8841273095736901 0.02418072826496598 0.05240932187918637 0.368985585959319 0.7110140520068127 0.033836685361536604 0.007315676139158422 1.228751790221822e-11 10.910535836416864 -0.11857050837285499 QLHVLVPQS(ph)PPTDLPGLTR ddPTM_A549_MK2206_60min_R1 3 QLHVLVPQSPPTDLPGLTR 19 0 O95402 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 QLHVLVPQS(0.994)PPT(0.006)DLPGLTR;QLHVLVPQS(0.992)PPT(0.008)DLPGLT(0.001)R;QLHVLVPQS(0.813)PPT(0.077)DLPGLT(0.109)R 68.369 0.00039502 5002400.0 1398.28 2066.3 1528.34 1658.1999999999998 2578.4700000000003 1795.52 1944.06 1778.75 2625.42 2195.45 2174.2 True False 1634.2754793362044 2171.465844119116 1745.0815934763461 2064.459074439427 2199.180478678556 1985.520734630284 2297.2705376797635 2030.893259693412 2030.7665619342338 1699.4963201937535 1634.286135132655 0.9999934798465081 1.3286937932339846 1.0677944063538773 1.263217639836279 1.3456520442792892 1.2149162205730388 1.4056721698206747 1.242679122116253 1.2426015972835727 1.0399013267378698 1.0 10.674444881118289 -10.528744298209839 0.8295810513223735 0.9994204674165695 1.2408227773919402 0.35123218722100724 0.11150973969383328 0.4864306802518679 0.5985876269843755 0.07114175962567747 0.019934209169061246 2.959754583534152e-11 10.528744298209839 0.2414023099753707 QLHVLVPQS(ph)PPTDLPGLTR ddPTM_A549_PD325901_60min_R1 2 QLHVLVPQSPPTDLPGLTR 19 0 O95402 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 QLHVLVPQS(0.99)PPT(0.007)DLPGLT(0.003)R;QLHVLVPQS(0.987)PPT(0.008)DLPGLT(0.005)R 58.015 0.0017134000000000001 15311600.0 1920.8899999999999 1950.48 1812.9099999999999 1676.27 2061.21 2343.6 2268.6 2344.41 2383.0 2693.5 2676.2 True False 2115.897338715521 2114.8537948101557 1935.944974513444 1779.8093908146143 1916.4377203884699 2324.514498618103 2354.932814425552 2297.648903395933 2282.8507971057247 2523.4319503244146 2347.044365829552 0.9015156975814843 0.9010710771386166 0.824843791919201 0.7583194492301593 0.816532379314915 0.990400749325637 1.0033610138397242 0.9789541846107538 0.9726491882052095 1.0751530678596777 1.0 11.196629397830083 -7.26595017711314 24.81168614401443 0.9876697616033865 0.8383934147836631 0.7523284373281485 0.04606997374938295 125.60343569166169 690883.2997313219 0.0061389188568216745 0.010018450424751125 5.4206307308917e-08 7.26595017711314 -0.14927634681972335 QLIFTTEDNGKENKT(ph)PSSDAQDK ddPTM_A549_PD325901_60min_R1 1 QLIFTTEDNGKENKTPSSDAQDK 23 2 Q99598 Q99598 TSNAX Translin-associated protein X 1 QLIFT(0.066)T(0.058)EDNGKENKT(0.869)PS(0.007)SDAQDK 64.733 0.00023778 4750900.0 2267.6 2806.2 2940.0 2199.9 3107.0 2647.2 2892.6 3068.6 2900.8 2784.2 2569.3 True False 2497.80508268111 3042.6883223597547 3139.526079656202 2335.782826664602 2888.7750385681115 2625.6420808763633 3002.679475891457 3007.394365729869 2778.8894638037286 2608.405136845455 2253.2923881346196 1.1085135226276202 1.3503300052766938 1.3933061222717074 1.0366088479969844 1.2820240523510462 1.1652469491764414 1.332574277400908 1.334666722155632 1.2332573785971126 1.1575972788000293 1.0 11.137818815076276 -10.399541481707944 0.7792228395144752 1.0006322670956938 1.2525826567864464 0.20924098621340026 0.11316916631036303 0.4576553878870139 0.5082446498683559 0.06549014938464161 0.019988017051413603 3.98527705056983e-11 10.399541481707944 0.2519503896907527 QLIVGVNK ddPTM_A549_MK2206_60min_R1 2 QLIVGVNK 8 0 Q5VTE0;P68104;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 126.67 0.0029675 30763000.0 7490.2 8444.3 9229.6 8949.5 11685.1 8642.5 9347.2 8423.7 13294.400000000001 12233.0 11698.5 False True 8754.362642191865 8874.078801478512 10538.496064455085 11142.127901758322 9966.237269158368 9557.043613572803 11045.465247883438 9617.785271499308 10283.239626794364 9469.55680381252 8793.439587825107 0.9955561250813225 1.0091703835396848 1.1984498169574147 1.2670955193898272 1.1333718927184135 1.0868379225354476 1.256102931914874 1.093745533296839 1.1694217631325914 1.076888822540332 1.0 13.102211876158714 -10.808637240867048 0.9610985930698146 0.9966946445774996 1.139294332577489 0.13357957979880986 0.0863444646672536 0.6579565554797783 1.0372278055565594 0.0667511816958155 0.015124488240116307 1.5536842353354117e-11 10.808637240867048 0.14259968799998934 QLIVGVNK ddPTM_A549_PD325901_60min_R1 2 QLIVGVNK 8 0 Q5VTE0;P68104;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 141.78 0.002877 69645000.0 16054.5 15443.6 17714.0 15637.3 20006.3 15180.099999999999 17224.8 17481.9 18254.4 17480.0 15049.5 False True 17684.341021301756 16745.08637131892 18916.17856293537 16603.180506114983 18601.12650598817 15056.478298546115 17880.29918977222 17133.209790214758 17487.23104938596 16376.30981684454 13198.506906640703 1.3398743620313633 1.268710657180002 1.4332059449404746 1.2579589966923646 1.4093356648265412 1.140771331564072 1.3547213572147254 1.2981172727647206 1.32494009914011 1.240769878947819 1.0 13.6880871121467 -10.761254303752843 0.6151619305500584 0.9518703464121295 1.3191655393153645 0.22966330688615533 0.10305084514099505 0.44641997013590196 0.23802853717405592 0.09149066483958761 0.014474243407250292 1.732789055549507e-11 10.761254303752843 0.367295192903235 QLLDS(ph)DEEQEEDEGR ddPTM_A549_MK2206_60min_R1 2 QLLDSDEEQEEDEGR 15 0 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 QLLDS(1)DEEQEEDEGR;QLLDS(1)DEEQEEDEGR 282.85 2.355099999999999e-106 334800000.0 4057.8 4752.2 4565.2 4616.799999999999 5861.6 5169.9 4343.1 4670.5 6014.2 6535.9 6295.7 True False 4742.657436314935 4994.0666817126585 5212.614006397929 5747.916207256028 4999.366404814565 5716.975386498125 5132.185052003013 5332.557677806374 4651.993302703897 5059.4356506203085 4732.303937519385 1.0021878347063602 1.0553140177911917 1.101496031366556 1.2146126460062106 1.056433921155785 1.2080744309704867 1.0845003025509898 1.126841755773116 0.9830292737161794 1.0691273674345614 1.0 12.20832702001993 -8.764095692160076 24.995940312207264 0.9919860387488638 1.1089604768673749 0.25218338449395195 0.06402579882381604 44.95559004138322 423031.0474056945 0.009994809191655886 0.010877934363994937 1.7214892213931714e-09 8.764095692160076 0.11697443811851105 QLLDS(ph)DEEQEEDEGR ddPTM_A549_PD325901_60min_R1 2 QLLDSDEEQEEDEGR 15 0 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 QLLDS(1)DEEQEEDEGR;QLLDS(1)DEEQEEDEGR 267.38 1.2673999999999997e-90 424200000.0 8491.8 10177.5 9939.3 8062.2 9907.4 8336.7 10114.3 9098.6 9339.2 10442.3 8870.4 True False 9353.881284667243 11035.193642939355 10613.840667866285 8560.183783415316 9211.538402674514 8268.80867922408 10499.20522125733 8917.121285286386 8946.705901942843 9782.971395905928 7779.397034098513 1.2023915534414142 1.4185152903971983 1.3643526125924528 1.1003659725676003 1.18409413509796 1.0629112568725296 1.3496168372995236 1.146248384829958 1.1500513295217871 1.2575487988369 1.0 12.925442623726125 -11.396846739359637 0.03673137133418262 6.365033439825135e-08 2.0680342934377496 0.021557365728855915 0.12465818288150733 182.55680934993438 1.1858943421756054 41.81465336534399 26.21773523659429 4.010082067185095e-12 11.396846739359637 2.0680342297874152 QLLDS(ph)DEEQEEDEGRNR ddPTM_A549_MK2206_60min_R1 4 QLLDSDEEQEEDEGRNR 17 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 QLLDS(1)DEEQEEDEGRNR;QLLDS(1)DEEQEEDEGRNR;QLLDS(1)DEEQEEDEGRNR;QLLDS(1)DEEQEEDEGRNR 200.14 8.8313e-49 144859000.0 6003.37 8441.880000000001 8011.03 6837.450000000001 10170.880000000001 6092.009999999999 5944.570000000001 5309.54 12431.899999999998 12741.1 11927.880000000001 True False 7016.592087695301 8871.535633815172 9147.114514955312 8512.625556944791 8674.757025283268 6736.662454651046 7024.621421239567 6062.183554784294 9616.094499664887 9862.876660921742 8965.85820325917 0.7825901245175512 0.9894798058026715 1.020216281318196 0.9494490503820789 0.967532257216595 0.7513683912826336 0.7834856699703386 0.6761409133796735 1.0725235980387633 1.1000482538678225 1.0 13.130225967736562 -8.847147527212774 24.99997498869465 1.0342479445126624 0.8740223980542347 0.3824558760384995 0.10739208749446277 21.632534473830024 6306.636580318762 0.01973188237504678 0.02100613126318104 1.4218457126767367e-09 8.847147527212774 -0.1602255464584278 QLLDS(ph)DEEQEEDEGRNR ddPTM_A549_PD325901_60min_R1 3 QLLDSDEEQEEDEGRNR 17 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 QLLDS(1)DEEQEEDEGRNR;QLLDS(1)DEEQEEDEGRNR;QLLDS(1)DEEQEEDEGRNR 173.37 2.3291999999999998e-30 90084600.0 3117.62 3080.35 3394.39 2926.39 4780.8 3524.5700000000006 3345.1099999999997 3706.87 3508.23 3834.98 4197.9 True False 3434.1184873294583 3339.9419049892663 3624.7537175252437 3107.146463986101 4445.013100864636 3495.8670704874603 3472.4099915644297 3632.933569866743 3360.791293298454 3592.83870831822 3681.5849126806197 0.9327826381244655 0.9072021925897676 0.984563388729775 0.8439697949880338 1.2073640038980256 0.9495549208838062 0.9431834587338401 0.9867852177885928 0.9128653482153177 0.9758945653930926 1.0 11.8461112611123 QLLDS(ph)DEEQEEDEGRNRAPELGAPGIQK ddPTM_A549_MK2206_60min_R1 2 QLLDSDEEQEEDEGRNRAPELGAPGIQK 28 2 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 QLLDS(1)DEEQEEDEGRNRAPELGAPGIQK;QLLDS(1)DEEQEEDEGRNRAPELGAPGIQK 205.81 2.0279999999999996e-78 61567000.0 7916.799999999999 8830.8 8730.6 7632.9 11903.900000000001 7507.3 7893.5 6030.4 14279.800000000001 14658.400000000001 16428.0 True False 9252.962292823226 9280.250000603533 9968.730361048316 9502.960842653903 10152.852079000973 8301.717503057578 9327.64677488103 6885.227667325459 11045.448100154825 11347.05725929907 12348.474210265504 0.7493202913385911 0.7515300953447915 0.8072843811554576 0.7695655901158966 0.8221948644117286 0.6722869045761309 0.7553683650346691 0.5575771994244964 0.8944787762501499 0.91890358809399 1.0 13.592045171539802 -8.9571709489952 8.776024782261139 0.9537426315839688 0.7399913682919214 0.6300698219880049 0.06997257955173354 0.12479373615945201 23.273086632458035 0.012821891339583094 0.013505266531691342 1.1036441129100338e-09 8.9571709489952 -0.2137512632920474 QLLDS(ph)DEEQEEDEGRNRAPELGAPGIQK ddPTM_A549_PD325901_60min_R1 3 QLLDSDEEQEEDEGRNRAPELGAPGIQK 28 2 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 QLLDS(1)DEEQEEDEGRNRAPELGAPGIQK;QLLDS(1)DEEQEEDEGRNRAPELGAPGIQK;QLLDS(1)DEEQEEDEGRNRAPELGAPGIQK 239.56 8.7047e-121 123176800.0 8211.9 9237.5 8648.6 9561.199999999999 11105.6 11906.7 11060.900000000001 11449.0 11485.6 12062.4 12010.099999999999 True False 9045.566042718732 10015.976544009072 9235.546004256677 10151.773608939306 10325.580968240112 11809.735782853804 11481.828602256724 11220.640713433258 11002.900174249908 11300.778005417938 10532.933838296649 0.8587888409428718 0.9509199144109333 0.8768255973162192 0.9638125298032838 0.9803138543125921 1.1212199719621172 1.0900883627038453 1.0652911036653605 1.0446187494546402 1.0728993629799028 1.0 13.362619719467562 -6.693251187681219 2.1788106582803577 1.0370409020071776 0.9024006059671567 0.7223235045046554 0.043086154164512204 0.15342720266785376 1.479196778880302 0.006835670461158794 0.01605263409906725 2.0265102854308502e-07 6.693251187681219 -0.13464029604002092 QLLFPAEEDNGAGPPRDGDGVPGGGPLS(ph)PAR ddPTM_A549_MK2206_60min_R1 3 QLLFPAEEDNGAGPPRDGDGVPGGGPLSPAR 31 1 M0QZR4;Q92888-2;Q92888;Q92888-3 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR;QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR;QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR 112.23 1.2489e-15 12935300.0 2382.68 2988.13 2487.96 2588.95 4626.799999999999 2969.3100000000004 2784.12 2485.46 4567.0 4217.9 5126.7 True False 2784.818133066903 3140.213053664838 2840.790139174141 3223.242866222383 3946.2038490848977 3283.520413331544 3289.958565766996 2837.781566402017 3532.581792000382 3265.0734605412285 3853.598900278072 0.7226538633447174 0.8148780230963433 0.7371784694481702 0.8364240673801824 1.0240307699901365 0.8520659514135237 0.853736637076992 0.736397751773607 0.9166968030184652 0.8472790098382122 1.0 11.911990701990149 -5.225619442266922 0.03718471755652007 1.558984799648508 6.220191946322298e-11 0.11302580247100147 0.0900309836632959 233.36062436293832 1.266321484100124 19.7389996637119 35.102132405510105 5.948131451911668e-06 5.225619442266922 -1.558984799586306 QLLFPAEEDNGAGPPRDGDGVPGGGPLS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 QLLFPAEEDNGAGPPRDGDGVPGGGPLSPAR 31 1 M0QZR4;Q92888-2;Q92888;Q92888-3 M0QZR4 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR;QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR 115.4 2.9249e-21 17406300.0 2441.27 2766.3999999999996 2993.0 2564.8 2981.7 2981.6000000000004 3309.2 2960.9 2946.1 3925.2 4386.5 True False 2689.1059332320115 2999.5342366816453 3196.1229783710933 2723.221870916573 2772.2756783065793 2957.3188381463306 3435.1334168637245 2901.842526718884 2822.2856623387247 3677.3622021211786 3846.988308314523 0.6990158840410375 0.7797097355868566 0.830811721331019 0.7078841037886324 0.7206353272025393 0.7687361128066484 0.892940955770348 0.7543154005555752 0.7336351026175201 0.9559067788621218 1.0 11.909513729695032 -10.805614240930256 0.7745892817180622 1.0203435185205576 0.7651153955097513 0.6859501870325089 0.05516312182688391 0.3485569131975233 0.32155637233655315 0.05715544608914789 0.010464541673982052 1.5645367145484177e-11 10.805614240930256 -0.25522812301080633 QLLGLQPISTVS(ph)PLHR ddPTM_A549_MK2206_60min_R1 2 QLLGLQPISTVSPLHR 16 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 QLLGLQPIS(0.009)T(0.045)VS(0.946)PLHR;QLLGLQPIS(0.016)T(0.07)VS(0.914)PLHR 95.666 1.7238e-06 15720600.0 654.95 1034.49 1063.01 674.6700000000001 1149.63 979.23 1158.6999999999998 978.01 1380.51 1439.33 1560.15 True False 765.4895480098742 1087.1411223359546 1213.7608023615749 839.9641802870872 980.5209499056523 1082.8514686397332 1369.2207915442632 1116.64591253001 1067.8266892214685 1114.1843533419012 1172.7216970505067 0.6527461288856039 0.9270239691737653 1.0349947523050738 0.7162519312123818 0.8361071108104716 0.9233661075455458 1.167558164045202 0.9521832122134928 0.9105542192211009 0.9500841982749771 1.0 10.195644967318529 -7.415985625819458 4.943739869630661 0.9732020706143911 0.8444188790164557 0.308168683409882 0.11292514603662261 0.26984728673490593 10.200658730516441 0.01701010176869629 0.027351046277824254 3.8371994555808196e-08 7.415985625819458 -0.1287831915979354 QLLGLQPISTVS(ph)PLHR ddPTM_A549_PD325901_60min_R1 2 QLLGLQPISTVSPLHR 16 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 QLLGLQPIS(0.008)T(0.037)VS(0.956)PLHR;QLLGLQPIS(0.023)T(0.07)VS(0.907)PLHR 89.01100000000001 3.6458999999999997e-06 26628000.0 1456.0700000000002 1589.78 1443.8400000000001 1575.5700000000002 1984.51 2017.42 1660.3600000000001 1683.71 1946.8899999999999 1825.6399999999999 1887.06 True False 1603.88915449792 1723.7563399333944 1541.827664915241 1672.8893805209084 1845.1248637878352 2000.9908003934688 1723.5459083838539 1650.1270832050577 1865.0689837923474 1710.3687788343289 1654.9635830589327 0.9691386390106482 1.0415675351280598 0.9316384243727114 1.0108315358993234 1.1149036043303262 1.2090844903638065 1.0414403833576553 0.9970775792873124 1.1269546973022022 1.0334781963437458 1.0 10.69258375600375 -6.570587253968313 7.5935466368487505 1.0694911352757026 0.9842732651021653 0.310008014546857 0.06273648344568324 0.2519005510477204 33.95993290353451 0.01012980607106487 0.021215645890037778 2.6878977641150634e-07 6.570587253968313 -0.08521787017353732 QLLLQQQQQQQVSGLKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 QLLLQQQQQQQVSGLKSPK 19 1 A0A3B3IRY1;A0A087WVT2;A0A3B3IU08;A0A3B3IU15;G5E965;C9J0F0;A0A3B3IST6;A0A3B3IUB6;A0A3B3IRS5;A0A3B3IST0;Q9H334-6;Q9H334-3;Q9H334-7;Q9H334;Q9H334-4;Q9H334-8 A0A3B3IRY1 FOXP1 Forkhead box protein P1 1 QLLLQQQQQQQVSGLKS(1)PK;QLLLQQQQQQQVS(0.227)GLKS(0.773)PK 244.47 5.359099999999999e-86 15440600.0 4664.4 5313.3 5858.9 6087.0 8058.9 5622.5 5731.4 6211.5 8668.3 6931.299999999999 7593.6 True False 5451.636686368823 5583.724275060785 6689.78011961904 7578.315273255815 6873.446485560275 6217.469218086561 6772.721191556738 7091.99914692095 6704.943890430679 5365.514516003084 5707.899547301687 0.955103824303634 0.9782450144379987 1.1720213476394343 1.327688970426667 1.2041989226684238 1.0892744636730276 1.1865522746906834 1.2424884299643242 1.1746779765247144 0.940015582183737 1.0 12.478744229867331 -10.691886035370494 0.9976653369349334 1.0016804907033658 1.1526573463065601 0.2830606727690824 0.10530833899657224 0.6847099897185707 1.2325729512991241 0.07101478173073802 0.019516360236410117 2.032890398339808e-11 10.691886035370494 0.1509768556031943 QLLLQQQQQQQVSGLKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 QLLLQQQQQQQVSGLKSPK 19 1 A0A3B3IRY1;A0A087WVT2;A0A3B3IU08;A0A3B3IU15;G5E965;C9J0F0;A0A3B3IST6;A0A3B3IUB6;A0A3B3IRS5;A0A3B3IST0;Q9H334-6;Q9H334-3;Q9H334-7;Q9H334;Q9H334-4;Q9H334-8 A0A3B3IRY1 FOXP1 Forkhead box protein P1 1 QLLLQQQQQQQVS(0.037)GLKS(0.963)PK;QLLLQQQQQQQVS(0.4)GLKS(0.6)PK 227.38 2.0773999999999998e-75 30278000.0 6446.3 6677.1 7211.6 5479.6 7603.4 7059.0 7447.1 8431.6 8238.7 7019.700000000001 7136.5 True False 7100.723630484757 7239.802650284487 7701.022542873691 5818.062446925474 7069.363414306016 7001.513844403994 7730.503465709487 8263.425123537756 7892.456089851001 6576.474944010501 6258.755742000817 1.134526401603073 1.1567479142379897 1.230439860625046 0.929587714676582 1.129515786479001 1.1186750422961433 1.2351502094629079 1.320298389036681 1.2610263789153588 1.050763956145078 1.0 12.611660158550475 -5.050344548791527 17.671648728130524 1.141131235624244 1.1336807276365946 0.0001829090614952067 0.11160373253308799 180986896.19811586 13059595070.135141 0.017552365259801972 7554086.021350039 8.905441420138379e-06 5.050344548791527 -0.007450507987649457 QLLLTADDR ddPTM_A549_MK2206_60min_R1 2 QLLLTADDR 9 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 152.97 4.9437e-05 10002500.0 3939.0 4621.3 3692.7 3679.4 5614.9 3948.0 3585.5 4212.7 5725.4 5076.5 5298.1 False True 4603.806900696075 4856.504430831762 4216.380386713758 4580.853165174544 4788.955648013051 4365.774739529698 4236.938938536255 4809.863125852669 4428.606041585064 3929.715124217631 3982.43554987872 1.1560279740964743 1.2194809859458142 1.0587441614321071 1.1502642309714337 1.2025193096116504 1.0962574748165486 1.0639064676552732 1.207769232071853 1.112034579371895 0.9867617629963417 1.0 11.959435298610352 -10.719172479392663 0.3541918913165845 0.9453892101336774 1.153622579190063 0.5411649033687307 0.05243049432845566 1.7386259777157829 0.27500749844801325 0.1403161029602634 0.019474095495140984 1.9090949138483357e-11 10.719172479392663 0.20823336905638556 QLLLTADDR ddPTM_A549_PD325901_60min_R1 2 QLLLTADDR 9 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 121.5 0.00034794 12158300.0 3872.9 4737.9 4492.4 3692.0 5179.9 4029.6000000000004 4039.7 4544.0 5162.1 5058.9 5133.2 False True 4266.073956921712 5137.179460661498 4797.281278995754 3920.046454859633 4816.081693684893 3996.7842736096222 4193.432994108661 4453.366355300958 4945.154888686308 4739.480190642724 4501.848942035818 0.9476270776407961 1.141126574171183 1.0656246668344087 0.8707636585173638 1.069800820883824 0.887809503399775 0.9314912712758224 0.9892305167589797 1.0984719728179104 1.0527852559396282 1.0 12.136301933139615 -8.70213381341219 22.156524356242908 1.0465006365148248 0.9892342239534201 0.10824441932190965 0.07959456434669136 49.21314422280347 18385.096909354623 0.014055188115424186 0.015937070969166727 1.9854830624764047e-09 8.70213381341219 -0.057266412561404745 QLLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 QLLSPK 6 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 QLLS(1)PK 71.223 0.049785 62674000.0 2162.1 2083.0 2141.8 1612.9 3067.2 2201.7 2174.0 1883.7 3187.2 2588.3 2366.3 True False 2527.0096217301298 2189.015802787648 2445.5394460052325 2008.060572405832 2616.01894309527 2434.682432629823 2568.9876592881924 2150.7202435893078 2465.3042889125495 2003.6012323475807 1778.6824034423698 1.4207199761123661 1.2306951474592318 1.3749163095515322 1.1289595987004402 1.47076225526961 1.3688123455417698 1.444320613008993 1.2091648511431357 1.3860283792886956 1.1264524956619093 1.0 10.796593214669482 -10.789903898246866 0.8044979552943978 0.9765001275337815 1.3375841134395916 0.48070556609701776 0.10710089131347635 0.3885764100251328 0.397435694931276 0.09147606846893865 0.0177775666126689 1.6221690152033486e-11 10.789903898246866 0.36108398590581015 QLLS(ph)PKGER ddPTM_A549_PD325901_60min_R1 1 QLLSPKGER 9 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 QLLS(1)PKGER 56.122 0.0045278 65598000.0 1579.2 1730.3 1982.2 2031.6 2030.3 1903.7 2302.1 1881.2 2315.1 1873.6 2354.0 True False 1739.5192214544052 1876.1184534883787 2116.7240119369135 2157.087317901635 1887.6987321547604 1888.1968983697234 2389.707675257457 1843.6779902271503 2217.804397977114 1755.3005762494229 2064.4729232354703 0.8425972566054326 0.9087638943445672 1.0253096507652688 1.044861036259569 0.9143732092142595 0.9146145135246023 1.1575388799540536 0.8930502160995712 1.0742714874173989 0.8502415103117418 1.0 11.01155778151472 -3.9130052688694326 0.6134699438778864 1.02360877744239 7.069546527311644e-16 0.07848724504168836 0.09236368555048731 12.05439541545906 0.876995710398001 0.012477507442892704 12.737552558764202 0.00012217848373566147 3.9130052688694326 -1.0236087774423894 QLLT(ph)LSSELSQAR ddPTM_A549_PD325901_60min_R1 1 QLLTLSSELSQAR 13 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 QLLT(0.998)LS(0.001)S(0.001)ELSQAR 67.964 0.004343 764720.0 936.46 898.67 988.38 934.75 1290.3 659.51 997.98 985.39 1444.1 1036.8 1404.7 True False 1031.5287298145845 974.4040747826389 1055.4574104117676 992.4873845287217 1199.6737792933493 654.1391692198438 1035.95867501561 965.7356234264997 1383.4094989930247 971.3362710586052 1231.9308051269597 0.8373268413466434 0.7909568221911776 0.8567505626283894 0.8056356577806644 0.9738158785384978 0.5309869405793695 0.8409227780523327 0.7839203463436191 1.122960391310658 0.7884665819023023 1.0 10.266705509928933 -8.755013245902283 24.992883645690473 1.0580646326328151 0.8020005134171787 0.16894583965719434 0.13123799196266897 79.44390740113847 308977.4104303206 0.017418700660563953 0.01952121797255818 1.7578699984275553e-09 8.755013245902283 -0.25606411921563643 QLLTKQDS(ph)LDIYNER ddPTM_A549_PD325901_60min_R1 1 QLLTKQDSLDIYNER 15 1 Q9ULQ0-2;Q9ULQ0 Q9ULQ0-2 STRIP2 Striatin-interacting protein 2 1 QLLT(0.013)KQDS(0.947)LDIY(0.04)NER 42.711000000000006 0.021361 2705100.0 1888.4 1944.8 2057.3 2015.8 2536.0 2238.6 2014.7 2413.8 2282.9 2385.9 2358.7 True False 2080.1089778333962 2108.6951212761933 2196.920749549899 2140.3113877860364 2357.880108725051 2220.3695838054655 2091.370510986143 2365.654865410533 2186.9576519985985 2235.25386681976 2068.5948530312253 1.0055661575224837 1.0193852692740712 1.0620352972118396 1.0346692029373084 1.1398462609872204 1.0733709312637205 1.0110102072049263 1.1436047333986206 1.0572189371901075 1.0805662904673285 1.0 11.014435396869075 -2.3641913709927924 16.230732070055073 1.0438577492808856 0.0052677178091582455 0.0 0.049582608361747056 0.0 0.0 0.006704078442367571 0.0 0.004323232866670316 2.3641913709927924 -1.0385900314717273 QLLTLS(ph)SELSQAR ddPTM_A549_PD325901_60min_R1 1 QLLTLSSELSQAR 13 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 QLLT(0.037)LS(0.88)S(0.082)ELSQAR 132.23 3.5265e-08 11716000.0 3257.7 3182.2 2836.6 2531.8 3780.4 2737.2 3194.9 3070.7 3648.6 4256.5 3877.9 True False 3588.419305808014 3450.375161931869 3029.108733861491 2688.1835358650114 3514.8777456719936 2714.9091507157664 3316.483667816362 3009.4524795824514 3495.2620303482786 3987.743863581163 3400.9428840334867 1.0551248368958734 1.0145348744697988 0.8906673346624969 0.7904230172418687 1.0335009629751208 0.7982813129445765 0.9751659410060551 0.8848876862093222 1.0277332344384833 1.17254067461778 1.0 11.731719062065217 -8.773364469650355 24.93581758049949 1.0130962558923708 0.9276777105575456 0.23864259629715467 0.09621564219319491 262.5718225252005 549045.8632617699 0.013922678636982171 0.014879232910581337 1.6851382260871007e-09 8.773364469650355 -0.08541854533482529 QLLTLSS(ph)ELSQAR ddPTM_A549_PD325901_60min_R1 1 QLLTLSSELSQAR 13 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 QLLT(0.001)LS(0.224)S(0.775)ELSQAR 211.94 2.0128e-37 11585000.0 3784.6 3123.6 3702.1 3305.8 4518.7 2933.9 4326.2 3702.2 3975.1 4226.5 4345.7 True False 4168.809805924736 3386.8367342751553 3953.3467685357923 3509.991757983472 4201.322100668725 2910.0072911314455 4490.835908387476 3628.356716680283 3808.0403707826144 3959.638068700999 3811.206449662014 1.0938294372099509 0.8886521312891636 1.0372953606033029 0.9209660521787649 1.1023601466253048 0.7635396637695948 1.178323968460363 0.9520231361389655 0.9991692712212742 1.038946097777555 1.0 11.896032044435486 QLLTLSSELS(ph)QARDENKR ddPTM_A549_MK2206_60min_R1 2 QLLTLSSELSQARDENKR 18 2 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 QLLTLSS(0.003)ELS(0.996)QARDENKR;QLLTLSS(0.001)ELS(0.999)QARDENKR 87.156 1.597e-06 6472000.0 955.0699999999999 1108.8899999999999 1086.08 680.21 1354.17 691.49 698.6600000000001 1107.58 1231.19 1275.06 1331.85 True False 1116.262466780351 1165.3277645478613 1240.102475262566 846.8614805357875 1154.9733868581513 764.6630128260866 825.5974783984776 1264.5828568214934 952.3274308064273 987.0230604323705 1001.1148878099654 1.1150193453043955 1.1640300016885448 1.2387214398293576 0.8459183764496581 1.1536871551124028 0.7638114487527602 0.8246780548879371 1.263174558903913 0.9512668749635066 0.9859238659326882 1.0 9.967391831825722 -6.249580811493601 24.740163057422755 0.9764636372444254 1.1717342413463285 0.2934292650425083 0.1374953844649997 618.517078075205 1290389.6523757633 0.017908524684638532 0.04695936981349654 5.628843687483938e-07 6.249580811493601 0.1952706041019031 QLLVEAIDVPAGT(ph)ATLGRR ddPTM_A549_MK2206_60min_R1 1 QLLVEAIDVPAGTATLGRR 19 1 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 QLLVEAIDVPAGT(0.5)AT(0.5)LGRR 44.632 0.027707 749420.0 0.0 120.39 210.15 112.97 281.29 330.79 0.0 291.99 377.45 260.92 378.06 True False 0.0 126.51733677273408 239.95243000186736 140.647655071416 239.91261362260997 365.7939782393692 0.0 333.3804766818717 291.95817766379344 201.97799078319002 284.1772680748099 0.0 0.4452056902011891 0.8443758771679785 0.4949292954508606 0.8442357661044612 1.287203514614243 0.0 1.1731426617631817 1.0273804785361482 0.710746472268919 1.0 8.15064734482204 -5.8379923378254155 0.47469578613575997 0.9985973975059048 3.350392038090199e-26 0.2811755522681876 0.3517254163540967 2.3597682457057876 0.4933311963594796 0.06926612665894935 1.1848087173986048 1.4521372371416261e-06 5.8379923378254155 -0.9985973975059048 QLMEQDAS(ph)SSPSAQVIGLK ddPTM_A549_MK2206_60min_R1 1 QLMEQDASSSPSAQVIGLK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 QLMEQDAS(0.405)S(0.281)S(0.281)PS(0.033)AQVIGLK 75.574 0.00015889999999999999 2503500.0 679.03 452.48 506.91 630.8 866.56 613.48 868.93 784.98 991.69 1055.0 907.93 True False 793.6336633103974 475.5092993016587 578.7974603485444 785.3460283176877 739.0901719250903 678.3980464049341 1026.8033333878977 896.2533189004268 767.073798403516 816.6747672706783 682.4659234067663 1.1628912684001842 0.6967517102216452 0.8480972316672976 1.1507476071440454 1.0829700745139983 0.9940394430515652 1.5045488692860318 1.3132572457632263 1.1239737723085133 1.1966528133653354 1.0 9.41461320158096 -6.26067433310692 24.725555465625447 1.1118398806423913 0.8819972259670885 0.27029250007468897 0.1771565136883474 65.80991638347572 2126847.6124511184 0.02565754660532079 0.06378912222635484 5.486882587023089e-07 6.26067433310692 -0.22984265467530274 QLMEQDASS(ph)SPSAQVIGLK ddPTM_A549_PD325901_60min_R1 3 QLMEQDASSSPSAQVIGLK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 QLMEQDAS(0.104)S(0.396)S(0.396)PS(0.104)AQVIGLK;QLMEQDAS(0.169)S(0.484)S(0.309)PS(0.038)AQVIGLK;QLMEQDAS(0.088)S(0.563)S(0.348)PS(0.002)AQVIGLK 117.4 1.9138999999999998e-14 11481100.0 3401.95 3922.6 3585.31 3494.6 4945.0 3981.8100000000004 4260.3 4070.8 4275.7 4626.200000000001 4087.2000000000003 True False 3747.313459616777 4253.171268365894 3828.6306968204685 3710.4535051875623 4597.680259323887 3949.383459524899 4422.428047825612 3989.60470051918 4096.007198147273 4334.100942487771 3584.5003108955043 1.0454214352350266 1.1865450967985376 1.0681072296696144 1.0351382852190607 1.2826558405780313 1.1017947041377818 1.2337641691320627 1.1130155822255934 1.1426996353430308 1.209122769305883 1.0 11.807556301988612 -10.605006640923751 0.8040013034230398 0.9965226094506323 1.1371029775606156 0.0 0.0952230567382856 0.6122164895889761 0.6799408602819047 0.05287658044266871 0.013116370873378465 2.4830951352724078e-11 10.605006640923751 0.1405803681099833 QLPALDGSLMGPES(ph)PPAQEEEAPVS(ph)PHK ddPTM_A549_PD325901_60min_R1 2 QLPALDGSLMGPESPPAQEEEAPVSPHK 28 0 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 2 QLPALDGS(0.001)LMGPES(0.999)PPAQEEEAPVS(1)PHK;QLPALDGS(0.005)LMGPES(0.995)PPAQEEEAPVS(1)PHK 92.405 3.605e-10 8539300.0 3802.1 3971.0 4118.200000000001 3493.9 5048.0 4099.1 3925.9 4335.4 4212.9 4313.3 3955.8 True False 4188.086393041913 4305.650106225713 4397.685816748359 3709.710267777378 4693.445894654597 4065.718288652274 4075.3022728349124 4248.927045944496 4035.8464637543893 4040.9575018876176 3469.261677882273 1.207198182755251 1.241085425661518 1.2676143298111833 1.0693082886851824 1.3528659208894263 1.171926094411562 1.1746886373018084 1.224735243534051 1.1633156672741891 1.16478890239099 1.0 11.760412948331915 -10.274372577561929 0.4344591162894921 0.9654338748063084 1.2247598976953178 0.17667263262091548 0.08161150960044294 0.7325899165431368 0.22669554159942917 0.08171145751695195 0.018618760392719723 5.316519638467377e-11 10.274372577561929 0.2593260228890094 QLPALDGSLMGPES(ph)PPAQEEEAPVS(ph)PHKKPAPQK ddPTM_A549_PD325901_60min_R1 3 QLPALDGSLMGPESPPAQEEEAPVSPHKKPAPQK 34 2 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 2 QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHKKPAPQK;QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHKKPAPQK;QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHKKPAPQK 134.43 3.6947e-30 34263500.0 4334.14 4808.6 5812.7 5257.969999999999 6619.6 6102.1 6462.4 6948.299999999999 6783.9 7144.6 5339.8 True False 4774.1387021747705 5213.83759778317 6207.184776604624 5582.742865183724 6154.662132380264 6052.406520744807 6708.330168360969 6809.710705664094 6498.796274647722 6693.48873669494 4683.038451781119 1.0194532356143697 1.1133450326038152 1.3254609887398683 1.1921198005667488 1.314245483087895 1.2924101698210209 1.432473860172889 1.4541223130623941 1.3877307097865081 1.429304671660165 1.0 12.19322916851717 -5.5670036607588775 5.028930052744118 1.244792248824753 1.0387435653232147 0.2245021920083481 0.13831039208621138 0.2535765557472345 14.419968391157436 0.024326536742188782 0.10592050628373449 2.7101687872159153e-06 5.5670036607588775 -0.20604868350153827 QLPALDGSLMGPES(ph)PPAQEEEAPVS(ph)PHKKPAPQKR ddPTM_A549_PD325901_60min_R1 1 QLPALDGSLMGPESPPAQEEEAPVSPHKKPAPQKR 35 3 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 2 QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHKKPAPQKR 58.325 0.00096342 7913400.0 879.89 970.2 924.18 847.14 1005.8 1002.2 1233.8 1004.8 1182.9 1191.5 1186.2 True False 969.2157850592168 1051.9621589171966 986.9004123458056 899.4659138054685 935.1560778216311 994.0384154783508 1280.7529341612653 984.7584757496488 1133.1868266455572 1116.2684866573375 1040.30491994134 0.9316650978771381 1.0112055982360575 0.9486645630796925 0.8646175717944188 0.8989249785287589 0.9555260159054155 1.2311322474890185 0.9466056123287169 1.0892833484911852 1.073020482033557 1.0 10.022790738039276 -7.547077995132604 24.99886988517536 1.0494256062608978 0.9322085295652555 0.4374570226789779 0.07407948342554098 184.44673389303475 190540.705699049 0.011202419100087803 0.016616237782673952 2.8374094111064677e-08 7.547077995132604 -0.1172170766956423 QLPALDGSLMGPESPPAQEEEAPVS(ph)PHKKPAPQK ddPTM_A549_MK2206_60min_R1 2 QLPALDGSLMGPESPPAQEEEAPVSPHKKPAPQK 34 2 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 1 QLPALDGSLMGPES(0.041)PPAQEEEAPVS(0.959)PHKKPAPQK;QLPALDGSLMGPES(0.05)PPAQEEEAPVS(0.95)PHKKPAPQK 88.573 1.9610999999999998e-09 5701800.0 1161.6599999999999 1619.56 1605.15 1643.54 1689.15 1769.57 1338.9499999999998 1425.13 2390.2 2159.54 2014.69 True False 1357.7198081397821 1701.9886862999356 1832.7844064596584 2046.2073737813132 1440.678272603475 1956.8247228545008 1582.2198833504713 1627.146541777581 1848.8235163650777 1671.698414134333 1514.3868703846965 0.8965475300210992 1.1238797163287495 1.2102484789729324 1.3511787600624927 0.9513277622629563 1.2921564239112908 1.0447923937352568 1.0744589599910097 1.2208396365028078 1.1038780425438284 1.0 10.564518092817796 -11.037956641259594 1.3270439638045162 0.9998140022279073 1.1436662000772497 0.019653706177558017 0.1341568662970864 0.6963865104715908 2.181107089913993 0.08964198823537779 0.01997466771597886 9.163119675668707e-12 11.037956641259594 0.14385219784934244 QLPALDGSLMGPESPPAQEEEAPVS(ph)PHKKPAPQK ddPTM_A549_PD325901_60min_R1 2 QLPALDGSLMGPESPPAQEEEAPVSPHKKPAPQK 34 2 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 1 QLPALDGSLMGPESPPAQEEEAPVS(1)PHKKPAPQK;QLPALDGSLMGPES(0.17)PPAQEEEAPVS(0.83)PHKKPAPQK 125.42 3.5527e-22 9689100.0 2361.6 2189.8 2177.9300000000003 2159.91 3536.9 2709.0 2849.4 2711.4 2469.8999999999996 2521.3 2574.2 True False 2601.3478934819677 2374.3421311037696 2325.7374267570162 2293.322735188482 3288.4803456426002 2686.938802166086 2957.8354762515078 2657.318999947847 2366.0986923086157 2362.10468771225 2257.5897191982776 1.1522677798186318 1.0517155136350256 1.030186046197508 1.0158279494658995 1.456633292434737 1.190180296852291 1.3101740547002063 1.1770601971431383 1.0480640801061374 1.0462949346487491 1.0 11.140567607858983 -8.83271488912215 3.952162901424284 1.0206227901773055 1.173803001586235 0.21442823456228266 0.12100194027087206 0.2458116853028569 7.326055605588773 0.022554766644779452 0.02401340504416615 1.4698909326872778e-09 8.83271488912215 0.15318021140892957 QLPAQPPEHAVDGEGFKNT(ph)LETSSLNFK ddPTM_A549_MK2206_60min_R1 1 QLPAQPPEHAVDGEGFKNTLETSSLNFK 28 1 Q14151;K7EQU4;K7ERX3 Q14151 SAFB2 Scaffold attachment factor B2 1 QLPAQPPEHAVDGEGFKNT(0.412)LET(0.263)S(0.263)S(0.063)LNFK 55.36600000000001 0.0028185 3858500.0 3160.9 3462.0 4063.4 3657.9 5142.1 4329.9 3523.2 3821.2 5741.9 4883.3 5349.7 True False 3694.3826434146317 3638.201012602418 4639.651220887881 4554.085664209371 4385.703901698678 4788.0871440449955 4163.3198349605145 4362.866801934207 4441.368817930152 3780.159138400859 4021.2218457911704 0.9187214197797552 0.9047501361831994 1.1537914093807067 1.1325129124561792 1.0906396289199998 1.1907045489311832 1.0353370181050994 1.0849604844608662 1.1044824156067714 0.940052372976482 1.0 11.973418214681002 -5.744861005081451 24.93387160190575 1.074644600136289 0.911735631221171 0.48455045625203474 0.06719375683413868 147.30700708278783 221545.95569408915 0.008766629504032872 0.033755687323909905 1.7994467316367071e-06 5.744861005081451 -0.16290896891511808 QLPLEPES(ph)PSGQVGPR ddPTM_A549_MK2206_60min_R1 3 QLPLEPESPSGQVGPR 16 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.998)PS(0.002)GQVGPR;QLPLEPES(0.954)PS(0.046)GQVGPR;QLPLEPES(0.98)PS(0.02)GQVGPR 178.03 1.5898e-28 34859200.0 5062.8 6491.9 5367.6 4844.4 6841.7 5960.9 5807.9 6613.200000000001 7361.700000000001 7386.9 7902.799999999999 True False 5917.276866423992 6822.30998085316 6128.806391996309 6031.27821747338 5835.294993145188 6591.67848147482 6863.120251324701 7550.641352075608 5694.286704219226 5718.1941595751405 5940.31665381581 0.9961214546741345 1.1484758100346038 1.0317305876378526 1.0153125782611505 0.9823205282157541 1.109651027986968 1.1553458597053274 1.271083982909462 0.9585830244523168 0.9626076340395108 1.0 12.536324121868859 QLPLEPES(ph)PSGQVGPR ddPTM_A549_PD325901_60min_R1 2 QLPLEPESPSGQVGPR 16 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.991)PS(0.009)GQVGPR;QLPLEPES(0.991)PS(0.009)GQVGPR 235.02 4.0862999999999995e-65 74170000.0 21629.4 25182.0 24059.0 21632.2 29495.0 23404.0 26129.0 24811.0 25782.0 26298.0 26108.0 True False 23825.200765277303 27304.175516236694 25691.788418519922 22968.371863709264 27423.372952226102 23213.405583571457 27123.353393337424 24316.125141147026 24698.472199320095 24637.539791955227 22896.881512247935 1.040543479798015 1.1924844656959603 1.12206495914201 1.0031222745954766 1.19769030282822 1.0138238943654492 1.184587227689879 1.0619841452269345 1.078682797310562 1.076021631101868 1.0 14.482863500440308 -10.181299924810933 0.43125907678901165 0.9851443748619264 1.1103679717893031 0.07451190617508119 0.06927975076283442 1.4005845693780619 0.4475419669587553 0.07468631015725448 0.01873171015552734 6.587188253253982e-11 10.181299924810933 0.12522359692737672 QLPLEPES(ph)PSGQVGPRPAPPQEES(ph)PSSEAK ddPTM_A549_MK2206_60min_R1 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 QLPLEPES(0.905)PS(0.185)GQVGPRPAPPQEES(0.603)PS(0.151)S(0.156)EAK 41.021 0.021039 6033000.0 639.16 727.22 753.07 732.37 1007.2 671.76 1008.3 945.08 1312.3 948.55 1210.6 True False 747.0345820383105 764.232391792239 859.8666498287233 911.8006828773389 859.0422142297724 742.8451973218009 1191.4950583533964 1079.0479841861147 1015.0661453124807 734.2718962034141 909.9746091397252 0.8209400290240456 0.8398392483881848 0.9449347720170203 1.0020067304288194 0.9440287735521506 0.8163361810985851 1.3093717631086608 1.1858001018360596 1.1154884269486456 0.8069147082000261 1.0 9.82968248038358 -7.727134791743258 24.999999145496073 1.085229918890338 0.9015939407775747 0.35345028429348835 0.1269726923120938 141.01719855274902 102768.19214502788 0.01649565764825924 0.02446630836158513 1.874412657335932e-08 7.727134791743258 -0.18363597811276333 QLPLEPES(ph)PSGQVGPRPAPPQEES(ph)PSSEAK ddPTM_A549_PD325901_60min_R1 2 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 QLPLEPES(0.993)PS(0.013)GQVGPRPAPPQEES(0.93)PS(0.05)S(0.014)EAK;QLPLEPES(0.995)PS(0.008)GQVGPRPAPPQEES(0.743)PS(0.122)S(0.132)EAK 76.492 3.4552999999999998e-06 36074000.0 5031.0 4895.3 5165.2 5036.299999999999 5632.2 5140.0 6319.299999999999 5860.4 5150.0 6910.0 5776.8 True False 5541.743416373551 5307.8441110568465 5515.741532870823 5347.380812732817 5236.613702035187 5098.141544161569 6559.784419553641 5743.509724605136 4933.563409607425 6473.701420732021 5066.290222152363 1.093846418853438 1.0476786520930619 1.0887140868387748 1.055482528290895 1.033618974123923 1.0062869122400324 1.2947904940129509 1.133671675477972 0.9738019721087848 1.2777991660299581 1.0 12.306714008784565 -8.770511907851157 24.986938812470065 0.9876287011769609 1.0929613631995139 0.0 0.11339530770968592 176.2413107003254 485390.19476025156 0.012899736818874408 0.013829990524308517 1.6962430926035523e-09 8.770511907851157 0.10533266202255298 QLPLEPES(ph)PSGQVGPRPAPPQEESPSSEAK ddPTM_A549_MK2206_60min_R1 2 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.952)PS(0.048)GQVGPRPAPPQEESPSSEAK;QLPLEPES(0.959)PS(0.041)GQVGPRPAPPQEESPSSEAK 144.55 2.4019999999999995e-36 38973000.0 2244.75 2677.2 2790.3 2390.3 3623.2 2152.26 2280.8 2098.7 3640.0 3512.2 4350.9 True False 2623.6089211316375 2813.4580447542467 3186.0064974266493 2975.9236073046436 3090.2320796240183 2380.010724645437 2695.1918368466013 2396.1971519991935 2815.545811885567 2718.791580671164 3270.4514512688193 0.8022161344464448 0.8602659561458174 0.9741794198444963 0.9099427561140193 0.9448946500719703 0.7277315563642069 0.8241039125656375 0.7326808508560964 0.8609043289094646 0.831319963369696 1.0 11.675274082939472 -10.354953950025651 0.9570196239183996 0.9918274091544839 0.8517796421911044 0.0 0.08807531246262759 0.4633653165399889 0.8209900600384369 0.03827848759303053 0.014657632993864014 4.416172713096904e-11 10.354953950025651 -0.1400477669633795 QLPLEPES(ph)PSGQVGPRPAPPQEESPSSEAK ddPTM_A549_PD325901_60min_R1 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.995)PS(0.005)GQVGPRPAPPQEESPSSEAK 174.16 5.5455000000000005e-58 28205000.0 2467.9 3023.9 3110.3 3101.0 3680.1 2893.5 3247.4 2546.6 2903.3 3319.5 2926.2 True False 2718.439391228043 3278.7346653779746 3321.3836617532925 3292.5417271180168 3421.6224716557786 2869.936295336867 3370.981584045463 2495.8060652309464 2781.284397497713 3109.906203490584 2566.2959507101223 1.0592852279862035 1.2776136222600174 1.294232514700508 1.282993774045014 1.333292238063571 1.1183185222821725 1.313559171970277 0.9725324409837959 1.0837738323703863 1.2118267975406496 1.0 11.325471839345935 -8.262513584359768 24.99996478397182 1.0356381564129264 1.244012920145426 0.4033442455468639 0.09840237785159331 49.23899012225313 1145933.582452159 0.013084822178568097 0.016277932987722635 5.463694596454026e-09 8.262513584359768 0.20837476373249952 QLPLEPESPS(ph)GQVGPR ddPTM_A549_MK2206_60min_R1 1 QLPLEPESPSGQVGPR 16 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.167)PS(0.833)GQVGPR 209.31 4.1866999999999995e-46 17526000.0 6784.3 6795.1 5887.7 7663.1 9623.3 7241.1 5509.7 6608.6 10195.0 9317.6 10345.0 True False 7929.323979789893 7140.941565781254 6722.664392681389 9540.559844009626 8207.725317908424 8007.348395746833 6510.741171288018 7545.389287988696 7885.848778069611 7212.747688645758 7776.050992524752 1.0197109030550964 0.9183249405959351 0.8645345046147458 1.2269158025302465 1.0555133094932951 1.029744841365422 0.8372811826397362 0.9703369094727138 1.0141199929952118 0.9275592065406327 1.0 12.924821964308117 -7.586311548192988 0.005225206670490878 1.3052395118965225 0.6878524405826832 0.0 0.10192208436965423 90977.43526273507 198.5008411397004 11580.899099513053 11870.936784391854 2.5923190528043493e-08 7.586311548192988 -0.6173870713138393 QLPPPS(ph)PQLPK ddPTM_A549_MK2206_60min_R1 1 QLPPPSPQLPK 11 0 Q14678 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 QLPPPS(1)PQLPK 113.24 3.2095e-05 3544000.0 2064.0 2747.6 2414.3 2554.1 3392.7 2511.9 2126.0 2280.7 3727.2 3485.2 5043.6 True False 2412.3527400448593 2887.441104051532 2756.684043557024 3179.8546146579056 2893.638324282514 2777.707590735727 2512.266680610259 2603.996209350816 2882.9951511153527 2697.8908994234757 3791.134923721394 0.6363141351025523 0.7616297394177698 0.7271395239215204 0.8387606029955132 0.7632644003717247 0.7326849733981817 0.6626687604523996 0.6868645568527333 0.7604570159390139 0.7116314649058215 1.0 11.888414086546513 -10.35917675553385 0.7135297321156835 1.0035629151104017 0.7303860657063791 0.0 0.0984704403262027 0.2641743190876635 0.24306066382775185 0.039311399947888015 0.01155429353074311 4.3734407223066376e-11 10.35917675553385 -0.27317684940402265 QLPS(ph)DGKK ddPTM_A549_MK2206_60min_R1 2 QLPSDGKK 8 1 A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439;A0A2R8YDC1 A0A2R8Y6V8 ABCC4 Multidrug resistance-associated protein 4 1 QLPS(1)DGKK;QLPS(1)DGKK 64.439 0.0039402000000000005 194993000.0 15750.2 17527.3 16189.5 15583.3 21836.0 16553.8 17013.3 16868.4 24615.2 23141.9 23358.6 True False 18408.448704580685 18419.364704848747 18485.41453968704 19401.209199560926 18623.953325974286 18305.512128476872 20104.39638627775 19259.54735730843 19039.896502397158 17914.128717252428 17558.014955436305 1.048435643283301 1.0490573536700258 1.0528191590338971 1.1049773706653514 1.0607095035084217 1.0425729887426214 1.1450267263870302 1.0969091555161992 1.084399150514565 1.0202821197453111 1.0 14.09984212784937 -10.645781768777784 0.949668964342529 1.0006438030750258 1.0764905305944366 0.41398107314438426 0.029926722539691725 0.394495560210528 0.6417569904433563 0.01983950675592511 0.0055057345012860795 2.2605714128693853e-11 10.645781768777784 0.0758467275194108 QLPS(ph)DGKK ddPTM_A549_PD325901_60min_R1 2 QLPSDGKK 8 1 A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439;A0A2R8YDC1 A0A2R8Y6V8 ABCC4 Multidrug resistance-associated protein 4 1 QLPS(1)DGKK;QLPS(1)DGKK 77.64 0.0018526 320670000.0 29265.0 29796.0 34056.0 27149.0 36374.0 24717.0 32746.0 34494.0 30655.0 31106.0 31592.0 True False 32235.961256245657 32307.013489071083 36367.244955364506 28825.932070147395 33819.21572348776 24515.712946895233 33992.166949298764 33805.99010998049 29366.676955634088 29141.961851416825 27706.384278188158 1.163484954679684 1.1660494261788166 1.3125944038823791 1.0404075746845323 1.220628985143757 0.8848398513766093 1.2268712729888427 1.2201516361914553 1.0599245524344003 1.0518139631218075 1.0 14.757930828936622 -9.105863868279885 0.11231018424815196 0.843457517793629 1.3144689690956088 0.16081198859343515 0.10941061568684513 8.721291470770703 0.663582450156723 1.4536525759334464 1.1506652576382816 7.836752510941379e-10 9.105863868279885 0.47101145130197986 QLPS(ph)PEPCEIQK ddPTM_A549_MK2206_60min_R1 1 QLPSPEPCEIQK 12 0 A0A590UK32;A0A590UJW2;A0A590UJD8;Q5VVJ2;Q5VVJ2-2 A0A590UK32 MYSM1 Histone H2A deubiquitinase MYSM1 1 QLPS(1)PEPCEIQK 76.07300000000001 0.0011876 11017000.0 1406.2 1616.7 1454.3 1228.5 2334.5 1646.7 1669.0 1811.7 2622.7 2309.0 2430.6 True False 1643.532181710796 1698.983124515983 1660.5416081452092 1529.4825551494605 1991.0981424934496 1820.9527010090048 1972.235696114073 2068.5140230985553 2028.6626375912858 1787.395296329855 1827.014938852649 0.8995723826664063 0.9299229515785629 0.9088823374307033 0.837148357478655 1.0898094482707643 0.9966818892857815 1.0794852599030316 1.1321823259954107 1.1103700328062287 0.9783145492243895 1.0 10.835272715080976 -6.767949383878691 24.999801987056596 1.059413214446227 0.8975273790790981 0.7018437060202452 0.05053275114594692 67.92867662264094 260861.6939134947 0.007866462009351542 0.015117820720765325 1.7062812409554797e-07 6.767949383878691 -0.16188583536712886 QLPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 QLPSPR 6 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 QLPS(1)PR;QLPS(1)PR 119.17 0.017844 40691000.0 5665.4 5829.6 5065.6 5462.299999999999 7513.700000000001 5736.0 5484.5 5549.299999999999 8253.3 8330.9 8964.8 True False 6621.581014268481 6126.301739765182 5783.978250856338 6800.563745211963 6408.444683338202 6342.979712751352 6480.962657482103 6335.930269018495 6383.940727811859 6448.943903938669 6738.592744106901 0.9826355836772077 0.909136665830238 0.8583362239711843 1.0091964306878847 0.9510063787342805 0.9412914466894406 0.961767969009538 0.9402453167331494 0.9473700177822446 0.957016420020109 1.0 12.718231621903573 QLPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QLPSPR 6 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 QLPS(1)PR;QLPS(1)PR 106.36 0.020691 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QLPTPVGAVQQDPALS(ph)SNR ddPTM_A549_MK2206_60min_R1 2 QLPTPVGAVQQDPALSSNR 19 0 H0YBN6;Q9Y6M4-6;Q9Y6M4-5;Q9Y6M4-3;Q9Y6M4-4;Q9Y6M4;Q9Y6M4-2 H0YBN6 CSNK1G3 Casein kinase I isoform gamma-3 1 QLPTPVGAVQQDPALS(0.628)S(0.372)NR;QLPTPVGAVQQDPALS(0.606)S(0.394)NR 129.11 1.9104000000000002e-16 6824200.0 2493.3 2727.8 2687.1000000000004 2491.1 4031.0 3118.3999999999996 2977.9 3136.8 4454.5 3699.5 4193.799999999999 True False 2914.1080846675636 2866.6333686241705 3068.1711856198826 3101.4196118297295 3438.0452398334105 3448.3870181736097 3518.945883438048 3581.4510060471102 3445.5628623748 2863.7803805856647 3152.363717008244 0.9244200055167501 0.909359967936934 0.9732922533862101 0.9838393948948052 1.0906245435080357 1.093905185993673 1.1162880299795195 1.1361160473722531 1.0930093008572048 0.9084549365717038 1.0 11.622218285970117 -6.3751349927299374 1.847101506898431 1.063772288425709 0.9230715542758163 0.45835189461625403 0.06126875732302289 0.20695303175511018 1.3567541821228457 0.0077912258971696725 0.024145773206548378 4.2156544692595835e-07 6.3751349927299374 -0.1407007341498927 QLPTPVGAVQQDPALS(ph)SNR ddPTM_A549_PD325901_60min_R1 1 QLPTPVGAVQQDPALSSNR 19 0 H0YBN6;Q9Y6M4-6;Q9Y6M4-5;Q9Y6M4-3;Q9Y6M4-4;Q9Y6M4;Q9Y6M4-2 H0YBN6 CSNK1G3 Casein kinase I isoform gamma-3 1 QLPTPVGAVQQDPALS(0.643)S(0.357)NR 182.7 2.3826999999999997e-43 5027800.0 2625.8 2686.5 2585.7 2681.6 3141.2 2644.3 2469.9 2556.6 3230.9 3104.5 3158.5 True False 2892.3692829882075 2912.900783272571 2761.181151077223 2847.2363416445287 2920.5729485517054 2622.7656975148725 2563.89339608114 2505.6066073860984 3095.1165087574022 2908.481340182714 2770.0245233811524 1.044167392228614 1.051579420573873 0.9968074750857675 1.0278740558473936 1.0543491308108675 0.9468384396515982 0.9255850893881603 0.9045431136933403 1.1173606885542786 1.0499839678793017 1.0 11.435683033356682 -8.779551493214134 24.998424073012874 1.0554203108994933 0.9952755054024631 0.20392862968368186 0.05434579992383693 342.40793250123875 472591.21296044474 0.011431464783452399 0.012180960351989399 1.6613016896885482e-09 8.779551493214134 -0.06014480549703016 QLPTPVGAVQQDPALSS(ph)NR ddPTM_A549_PD325901_60min_R1 1 QLPTPVGAVQQDPALSSNR 19 0 H0YBN6;Q9Y6M4-6;Q9Y6M4-5;Q9Y6M4-3;Q9Y6M4-4;Q9Y6M4;Q9Y6M4-2 H0YBN6 CSNK1G3 Casein kinase I isoform gamma-3 1 QLPTPVGAVQQDPALS(0.352)S(0.648)NR 120.9 3.46e-14 4474100.0 1276.8 1442.1 1611.9 1567.1 1731.2 1710.2 1180.4 1589.7 1454.5 1550.4 1744.7 True False 1406.4197960695185 1563.6308280503906 1721.2932271421184 1663.8962078576742 1609.606484315775 1696.2726982150025 1225.3207679396648 1557.9921864044745 1393.3724231599997 1452.5074794070806 1530.112960564539 0.91916076284369 1.02190548564041 1.1249451978415 1.0874335756516798 1.051952715779825 1.108593118242171 0.8008041233031447 1.0182203710173459 0.9106336976885102 0.9492812078862297 1.0 10.579422448449678 -7.7016993750052185 24.999991770312015 0.9515133974382117 1.0558276973931604 0.3748445474650052 0.07360490067023734 68.29561684612459 28579.940220635606 0.011263668813887675 0.01670671791897602 1.9874701972583637e-08 7.7016993750052185 0.10431429995494867 QLQDIATLADQR ddPTM_A549_PD325901_60min_R1 1 QLQDIATLADQR 12 0 O95373 O95373 IPO7 Importin-7 0 91.31299999999999 0.00074816 1029600.0 1410.0 1220.6 1369.3 1576.2 1709.2 1425.6 1280.9 1449.0 1456.3 1520.8 1936.8 False True 1553.1421620128608 1323.4642456960728 1462.2289322698077 1673.5582941900734 1589.1516884198954 1413.990386256173 1329.645350435375 1420.0985582814906 1395.0967754196677 1424.776428458649 1698.58587838677 0.914373645616291 0.7791565104456369 0.8608507528972029 0.9852656350702347 0.9355733546596952 0.83245151407894 0.7827954814378911 0.8360475477579195 0.8213283727194642 0.838801526957135 1.0 10.730118445587848 -10.82575201041191 1.0673098073840246 1.000144868794924 0.8582824314545299 0.0 0.07605114276916515 0.4245128752751395 0.856977968071647 0.044904057085984536 0.011043780866325343 1.4936470641735977e-11 10.82575201041191 -0.14186243734039405 QLQDKLNES(ph)DEQHQENEGTNQLVMGIQK ddPTM_A549_MK2206_60min_R1 4 QLQDKLNESDEQHQENEGTNQLVMGIQK 28 1 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 QLQDKLNES(1)DEQHQENEGTNQLVMGIQK;QLQDKLNES(1)DEQHQENEGTNQLVMGIQK;QLQDKLNES(1)DEQHQENEGTNQLVMGIQK;QLQDKLNES(1)DEQHQENEGTNQLVMGIQK 187.69 6.378599999999998e-67 60848800.0 3880.7 4702.469999999999 4683.05 3920.6000000000004 5882.530000000001 4324.700000000001 3831.44 4416.49 6382.299999999999 6134.5 6705.2 True False 4535.6672859942255 4941.80563712666 5347.176908495102 4881.147176002425 5017.217629540372 4782.3368834964795 4527.56305303733 5042.540982433372 4936.71924043881 4748.712189404719 5040.11378589434 0.8999136683556831 0.9804948552862411 1.0609238472869666 0.9684597180450942 0.9954572143950308 0.9488549438865258 0.8983057219280495 1.0004815757425605 0.9794856723780923 0.9421835282161365 1.0 12.299240589119908 -9.72894789830831 0.9227525306503945 0.9967158781796693 0.971478485042673 0.0 0.04618863379179972 1.2473171225992603 2.2102850260671603 0.01462317996891672 0.008884214036374283 1.8666036111847542e-10 9.72894789830831 -0.025237393136996356 QLQDKLNES(ph)DEQHQENEGTNQLVMGIQK ddPTM_A549_PD325901_60min_R1 5 QLQDKLNESDEQHQENEGTNQLVMGIQK 28 1 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 QLQDKLNES(1)DEQHQENEGTNQLVMGIQK;QLQDKLNES(1)DEQHQENEGTNQLVMGIQK;QLQDKLNES(1)DEQHQENEGTNQLVMGIQK;QLQDKLNES(1)DEQHQENEGTNQLVMGIQK;QLQDKLNES(1)DEQHQENEGTNQLVMGIQK 254.01 3.234399999999999e-138 120404100.0 7502.300000000001 7507.200000000001 8176.3 8214.4 10690.099999999999 8194.3 9458.9 9863.5 9606.900000000001 9833.5 8582.4 True False 8263.927973098649 8139.858090520688 8731.192886086055 8721.784831744035 9939.264254842921 8127.5683376115085 9818.863615608689 9666.764754733944 9203.155401894672 9212.61113180439 7526.819208316094 1.0979309777984507 1.0814472707843534 1.1600109746809508 1.1587610370802675 1.3205132181016663 1.0798144757657617 1.3045170003233508 1.2843094124080336 1.222715086835945 1.2239713585289427 1.0 12.877824603493385 -10.709563075946832 1.0103953384785325 1.002034257838949 1.1920209462280713 0.0 0.10461890143437337 0.41330663277477087 0.7622538623496857 0.0545793086797444 0.014848671250665482 1.9518072373944734e-11 10.709563075946832 0.18998668838912236 QLQEDQENNLQDNQT(ph)SNSSPCR ddPTM_A549_MK2206_60min_R1 1 QLQEDQENNLQDNQTSNSSPCR 22 0 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 QLQEDQENNLQDNQT(0.274)S(0.274)NS(0.226)S(0.226)PCR 64.679 0.00096543 3571800.0 297.93 344.76 132.2 296.84 416.65 312.59 199.92 246.74 509.96 396.08 475.15 True False 348.21330031083596 362.3068114109792 150.94794787650184 369.56581332565395 355.3613369329175 345.66806631955143 236.24287619360427 281.7161506095589 394.4548742387816 306.60525291049305 357.15714152712775 0.9749582461712796 1.0144184989885197 0.4226373501341192 1.0347428914495993 0.994971948239557 0.9678318760239499 0.6614535976614667 0.7887736736972435 1.1044294748025385 0.858460372931406 1.0 8.480415158766913 -8.763589614923719 24.999802192244076 1.0493139241019487 0.8558473429939109 0.06371661729589151 0.18465827083682732 66.85525312992615 777293.2566110233 0.029951834482552057 0.03265419008242902 1.723496417762133e-09 8.763589614923719 -0.19346658110803783 QLQEDQENNLQDNQTSNSS(ph)PCR ddPTM_A549_MK2206_60min_R1 1 QLQEDQENNLQDNQTSNSSPCR 22 0 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 QLQEDQENNLQDNQTS(0.002)NS(0.213)S(0.784)PCR 124.79 4.0048000000000005e-16 4928800.0 663.86 571.53 678.07 270.07 450.37 381.31 438.66 360.13 595.5 689.92 828.05 True False 775.9033381812889 600.6184357979952 774.2305220621754 336.23716212390315 384.12116960153156 421.65997110690716 518.3588438929894 411.1795303518698 460.6202008180921 534.06659282975 622.4223319826119 1.2465865993429115 0.9649692900395067 1.243899009208115 0.540207420021196 0.6171391189933436 0.6774499394386876 0.8328088779235356 0.6606117891723663 0.7400444636214628 0.8580453582514931 1.0 9.281750013695518 -6.2436883048222045 24.988660067028846 0.8052403787046626 1.1331334113324738 0.5800780667683572 0.1483308576092881 637.609275688198 897578.2609739489 0.024620977929425754 0.0649857361323477 5.705736287225454e-07 6.2436883048222045 0.3278930326278112 QLQEDQENNLQDNQTSNSS(ph)PCR ddPTM_A549_PD325901_60min_R1 1 QLQEDQENNLQDNQTSNSSPCR 22 0 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 QLQEDQENNLQDNQTSNS(0.151)S(0.849)PCR 154.69 5.0487999999999996e-33 5925400.0 721.26 432.94 582.75 832.93 642.24 540.74 567.49 496.11 644.5 477.44 427.98 True False 794.4817842364512 469.4253732030621 622.2989193604259 884.3781943787195 597.1312780077191 536.3363927217753 589.0861424924437 486.2146968592339 617.4139063091233 447.29435691958 375.34117318874974 2.116692334834596 1.2506631479168948 1.6579553851596431 2.3561981939401777 1.590902679113854 1.4289303466637406 1.5694684851326102 1.2953939817700966 1.6449405245468265 1.1917007482007491 1.0 8.552058745646125 -12.552692219409192 0.20423921847608 6.87519801889044e-17 1.805577809934631 0.38477368327961303 0.29853863640038525 13.122430448118097 0.3754949964686931 6.30134989602814 0.29125845306567344 2.800965635555985e-13 12.552692219409192 1.805577809934631 QLQPGEPGAETEDDHS(ph)VTEGPADEGIRPR ddPTM_A549_MK2206_60min_R1 2 QLQPGEPGAETEDDHSVTEGPADEGIRPR 29 1 Q8IVF2 Q8IVF2 AHNAK2 Protein AHNAK2 1 QLQPGEPGAET(0.001)EDDHS(0.959)VT(0.041)EGPADEGIRPR;QLQPGEPGAETEDDHS(0.97)VT(0.03)EGPADEGIRPR 143.75 6.0986e-36 33173000.0 1993.37 2561.3 1727.6399999999999 1875.74 3027.7 1882.1399999999999 2181.31 2397.7 3056.5 3268.7 3484.1 True False 2329.8021227825675 2691.6592298031715 1972.6453303279843 2335.2963842051686 2582.3293407699366 2081.306805536581 2577.6257916660225 2737.5813176482898 2364.207630227538 2530.2983997892575 2618.901813731801 0.8896103361212762 1.0277816509537998 0.7532337867669294 0.8917082618219622 0.9860351874323419 0.7947250235284022 0.9842391868800294 1.0453165152256612 0.9027477157910946 0.9661677221047519 1.0 11.354746256722661 QLQPGEPGAETEDDHS(ph)VTEGPADEGIRPR ddPTM_A549_PD325901_60min_R1 2 QLQPGEPGAETEDDHSVTEGPADEGIRPR 29 1 Q8IVF2 Q8IVF2 AHNAK2 Protein AHNAK2 1 QLQPGEPGAETEDDHS(0.956)VT(0.043)EGPADEGIRPR;QLQPGEPGAET(0.003)EDDHS(0.933)VT(0.064)EGPADEGIRPR 127.95 1.7749000000000002e-27 31895000.0 6913.3 6602.9 4979.6 4205.2 5785.3 4892.200000000001 4204.0 4707.1 4381.3 6647.4 7553.1 True False 7615.13312669753 7159.349555879567 5317.545600767356 4464.945653297866 5378.960486201509 4852.359545203742 4363.985520517068 4613.2131978514835 4197.169197381168 6227.682029547621 6624.116583045804 1.1496073523506816 1.080800657132707 0.8027554367592848 0.6740439419085315 0.8120268444502882 0.7325293092852845 0.6588026442177266 0.6964269333149785 0.6336194637823368 0.9401528417369882 1.0 12.693512348849255 -5.732492081179537 4.165310288853982 0.7843737686301503 1.1314906281853512 0.5921926691392705 0.11001235474593403 0.14136741369125908 5.342229826567474 0.02021109238982862 0.08187007333280023 1.8514326524723528e-06 5.732492081179537 0.3471168595552009 QLQT(ph)PKEK ddPTM_A549_PD325901_60min_R1 2 QLQTPKEK 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 QLQT(1)PKEK;QLQT(1)PKEK 75.416 0.0019179000000000002 66658000.0 9456.6 10141.3 10089.5 9137.5 11859.0 10979.1 11699.5 13173.4 11382.0 10554.6 10461.2 True False 10416.62707041902 10995.942941895439 10774.234143092264 9701.902622231828 11026.064751329017 10889.68984970901 12144.730874712057 12910.646202667622 10903.654121971203 9888.180754740693 9174.538719010574 1.1353842835536474 1.1985281526046352 1.1743624909192394 1.057481244493361 1.2018113486710664 1.186946851850379 1.3237429419254554 1.407225648949026 1.1884689199008696 1.0777850590189761 1.0 13.163419908064755 -10.288918669771878 0.9981946904410786 1.0146347187937415 1.2071557313479462 0.3367294725302652 0.08956570771402095 0.3794600211332256 0.7423239405693629 0.042318906359279755 0.017792687689348653 5.14139925433592e-11 10.288918669771878 0.19252101255420473 QLRT(ph)PK ddPTM_A549_MK2206_60min_R1 3 QLRTPK 6 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 QLRT(1)PK;QLRT(1)PK;QLRT(1)PK 64.265 0.023303 170963000.0 11056.9 12919.1 11257.7 11100.5 15725.8 13085.8 12509.300000000001 13230.7 18415.1 18323.8 19455.8 True False 12923.034404749036 13576.627008062373 12854.211140766223 13820.122998320374 13412.555651841292 14470.53067034897 14782.077886998071 15106.192242319394 14244.10925287196 14184.440853568209 14624.387907236638 0.8836632675993424 0.9283552306038191 0.8789572064349803 0.945005225926872 0.9171362067881357 0.9894794067373216 1.0107826721201372 1.0329452650010975 0.9739969524347406 0.9699168911233045 1.0 13.83608862259257 -7.241834845418109 3.609391141040427 0.9935324474110622 0.9104101628304014 0.7670237966499788 0.023485071120345213 0.09066073478553592 2.559516575268125 0.003489218284541534 0.0060480837560368435 5.730138967026862e-08 7.241834845418109 -0.08312228458066073 QLRT(ph)PK ddPTM_A549_PD325901_60min_R1 1 QLRTPK 6 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 QLRT(1)PK 64.265 0.023303 177940000.0 8475.0 9152.5 9594.6 7798.3 10387.0 7794.6 10300.0 10788.0 10566.0 9549.8 9559.9 True False 9335.375761034755 9923.81329570154 10245.747253016802 8279.983279775699 9657.452953204694 7731.12336189139 10691.972136376271 10572.824876977722 10121.947764254759 8946.823998220932 8384.092905199137 1.1134628237773592 1.183647820690011 1.2220460065111178 0.9875824818974898 1.1518780937191098 0.9221180453638785 1.2752688045412728 1.2610576953913895 1.207280009740582 1.0671188999674412 1.0 13.033438988313147 -10.9082507716418 1.2132739526053233 1.0015852116275912 1.1512275345252898 0.13917641680191073 0.10488373153104955 0.5717600911798973 1.5200998134005013 0.06930917605994782 0.01722508927623868 1.2352339749185964e-11 10.9082507716418 0.14964232289769863 QLS(ph)ALHR ddPTM_A549_MK2206_60min_R1 2 QLSALHR 7 0 E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;P61313;E7ENU7;P61313-2 E7EX53 RPL15 Ribosomal protein L15;60S ribosomal protein L15 1 QLS(1)ALHR;QLS(1)ALHR 83.99799999999999 0.0043823 80996000.0 691.5999999999999 836.35 555.99 734.57 1000.17 855.29 588.34 780.54 1049.0 987.04 836.51 True False 808.3251720034038 878.9166426603214 634.8377423589734 914.5396829761005 853.0463179171875 945.7962201044465 695.2337624036875 891.1839353034972 811.4031749087808 764.0669784709482 628.7814804984897 1.285542270364856 1.3978093660829956 1.0096317433771782 1.4544634524717004 1.356665780361253 1.5041731498749482 1.1056842225259484 1.4173189938688688 1.290437457327005 1.215155029478931 1.0 9.29641491629865 -10.45045659671432 0.6699483945496721 0.9850367060169477 1.3181980383944705 0.16438469697224056 0.15230575928326792 0.6044786934146964 0.46322565871679205 0.10969424964051623 0.02749911884461978 3.5444055121410795e-11 10.45045659671432 0.33316133237752277 QLS(ph)ALHR ddPTM_A549_PD325901_60min_R1 4 QLSALHR 7 0 E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;P61313;E7ENU7;P61313-2 E7EX53 RPL15 Ribosomal protein L15;60S ribosomal protein L15 1 QLS(1)ALHR;QLS(1)ALHR;QLS(1)ALHR;QLS(1)ALHR 94.309 0.0037007 105146000.0 1921.8799999999999 2019.44 2402.8 1801.1499999999999 2037.6599999999999 1772.73 2085.2799999999997 2244.25 2461.51 2425.69 2385.35 True False 2116.987842786722 2189.625296025297 2565.8684572101765 1912.4029447915577 1894.5417911453815 1758.2934746267588 2164.6364715089994 2199.486673169933 2358.0612948316043 2272.531519429154 2091.9670719794926 1.0119604037474423 1.0466824862369353 1.226533864504025 0.9141649361535958 0.9056269654152346 0.8404976819080617 1.034737353423419 1.05139641184156 1.1271980933238706 1.0863132359338739 1.0 11.030644428089312 -11.544189791387373 2.769913379568027 0.9990678440990226 1.0400579365180107 0.0 0.10632245690136645 1.4285944202842693 19.92017882938692 0.09950116749250848 0.016166536227495802 2.8563420182196097e-12 11.544189791387373 0.0409900924189881 QLS(ph)ALS(ph)SDGEGQGRPVPR ddPTM_A549_MK2206_60min_R1 2 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 2 QLS(0.956)ALS(0.572)S(0.472)DGEGQGRPVPR;QLS(0.991)ALS(0.799)S(0.21)DGEGQGRPVPR 71.946 0.00025375 56671000.0 3826.2 5071.299999999999 3835.6 3501.8999999999996 6948.8 5119.2 3985.8 4247.0 6267.3 5438.1 5869.799999999999 True False 4471.969018391302 5329.407508726358 4379.545755484954 4359.8656572062655 5926.640725019697 5660.910346150057 4709.96826696913 4849.0252558920165 4847.766556821543 4209.629433075524 4412.166661761408 1.013553965934283 1.2078889845468286 0.9926066015232 0.9881461856351855 1.3432495142088958 1.2830227822559472 1.06749554766112 1.0990122603293067 1.0987269811984475 0.954095743834611 1.0 12.10727157186416 -9.97467017009009 0.6777742367979191 1.0044883319865925 1.1293504735032263 0.19334462868735092 0.11096983876439366 1.017503757835291 0.9408948888782426 0.06109512533812496 0.02505925947490129 1.0600584930865669e-10 9.97467017009009 0.12486214151663377 QLS(ph)ALS(ph)SDGEGQGRPVPR ddPTM_A549_PD325901_60min_R1 2 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 2 QLS(0.996)ALS(0.547)S(0.457)DGEGQGRPVPR;QLS(0.999)ALS(0.873)S(0.128)DGEGQGRPVPR 129.84 5.056899999999999e-13 111468000.0 16120.5 23732.4 23540.6 20846.4 22178.1 18237.1 19631.2 20290.4 16594.5 20653.1 19971.5 True False 17757.04129271513 25732.41263686504 25138.206677127473 22134.034782390532 20620.386766291413 18088.583104091227 20378.276058604824 19885.692054489125 15897.090873928235 19349.05974131991 17515.132109769398 1.0138114392417743 1.4691532142376647 1.4352279228945215 1.2637092682872118 1.1772898221412786 1.0327403179563788 1.163466877148957 1.1353435377970973 0.9076203807256087 1.1047053268029652 1.0 14.096314249413112 -7.5264353058982 0.7411212884944616 0.9614870644600713 1.3232958629367686 0.3578024181933025 0.13509830156769692 0.3559186730792512 0.39014936376501136 0.025349084909711318 0.05586704820468924 2.9755324721190882e-08 7.5264353058982 0.36180879847669734 QLS(ph)ALSSDGEGQGRPVPR ddPTM_A549_MK2206_60min_R1 2 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 QLS(0.999)ALS(0.001)SDGEGQGRPVPR;QLS(1)ALSSDGEGQGRPVPR 132.83 3.4939e-13 25358000.0 2076.02 2414.8999999999996 1926.9 1723.96 2934.5 1984.22 2194.41 2365.3999999999996 3174.1 3402.2 2878.2 True False 2426.401422184073 2537.808095128129 2200.1633945781514 2146.330277391504 2502.8389373086447 2194.1888433813638 2593.105892096873 2700.702693733687 2455.1714179961496 2633.6406570694817 2163.4635057210944 1.1215356375402967 1.1730302306542784 1.016963488757729 0.9920806483288102 1.156866723515373 1.0142019209378936 1.198590078011312 1.2483236655445813 1.1348337568457516 1.2173261301173068 1.0 11.079127069596026 -10.684140044582707 1.083987055100249 1.0036451377364428 1.1164337158740303 0.0 0.09971065531656403 0.5868816868269193 1.2829630160999597 0.046459288830928466 0.01393752950946244 2.069473909172879e-11 10.684140044582707 0.11278857813758747 QLS(ph)ALSSDGEGQGRPVPR ddPTM_A549_PD325901_60min_R1 2 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 QLS(0.987)ALS(0.013)SDGEGQGRPVPR;QLS(0.813)ALS(0.187)SDGEGQGRPVPR 163.18 1.5294e-23 62146000.0 7146.2 8959.2 9106.7 7013.8 11002.9 8277.599999999999 7398.6 8472.8 9216.0 10058.2 8784.4 True False 7871.676963245609 9714.22322631513 9724.735425035755 7447.026496504469 10230.094261944341 8210.189970029527 7680.15777166927 8303.803357216988 8828.6835695033 9423.123535456849 7703.974488899603 1.0217683060331577 1.2609365776472945 1.262301093941549 0.9666473464099132 1.3278982526077336 1.0657083537671774 0.9969085155636679 1.0778596644085021 1.145990758695301 1.2231509267111813 1.0 12.911387210481184 -7.438094669602228 24.99999999984182 1.0650510888494515 1.170107516798382 0.10110304012933846 0.1150628182829325 109.95253040003296 32419.72434079714 0.015546095327569223 0.024852149123100693 3.646744447694674e-08 7.438094669602228 0.10505642794893055 QLS(ph)DQQDEER ddPTM_A549_PD325901_60min_R1 1 QLSDQQDEER 10 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C1E6 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QLS(1)DQQDEER 95.417 0.00055771 1608600.0 291.69 512.39 570.7 424.16 493.38 356.01 459.83 280.57 439.79 385.84 427.98 True False 321.30215406917125 555.5709035328613 609.4311338978888 450.359399862747 458.72669086859844 353.1107725947391 477.32908227863066 274.97381124709284 421.3071557109221 361.47799655213345 375.34117318874974 0.8560269350135921 1.4801757526704338 1.6236724810134833 1.1998667666450558 1.2221592610569163 0.9407728163549179 1.2717205475312823 0.7325969834618047 1.1224645357493386 0.9630651321334128 1.0 8.552058745646125 -6.918361591998521 2.2361790945402262 1.042781544782135 1.3345888536093127 0.26353814161860567 0.21854549585575417 0.30155971973328094 3.050569019602939 0.030577687243528107 0.06382847477814355 1.20680863224376e-07 6.918361591998521 0.29180730882717776 QLS(ph)EEQPSGNGVK ddPTM_A549_MK2206_60min_R1 1 QLSEEQPSGNGVK 13 0 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 1 QLS(0.998)EEQPS(0.002)GNGVK 212.7 1.8467000000000001e-37 33659000.0 5928.4 8806.9 6478.3 7982.1 8335.2 7765.3 5555.8 9116.3 9546.3 11943.0 9485.1 True False 6928.968984535824 9255.133592688693 7397.0203534670345 9937.714858330084 7109.103121572671 8587.018891811038 6565.2169445599575 10408.56344249785 7384.078292308567 9245.068005226263 7129.6878945574235 0.9718474478841043 1.298112025317934 1.0374956748266195 1.3938499139515235 0.997112808682626 1.2044031967186242 0.9208280981796741 1.459890474370332 1.0356804395246162 1.2967002401723158 1.0 12.799623208059224 -8.967875086307433 24.999957727112776 1.0157410939044904 1.162437219212342 0.0 0.18562593692248153 234.3274889942568 182357.51394751272 0.02546790911392674 0.0269106131491793 1.0767748758289995e-09 8.967875086307433 0.1466961253078516 QLS(ph)EEQPSGNGVK ddPTM_A549_PD325901_60min_R1 2 QLSEEQPSGNGVK 13 0 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 1 QLS(1)EEQPSGNGVK;QLS(1)EEQPSGNGVK 233.02 7.286499999999998e-47 93075000.0 34620.0 36619.0 44443.0 31543.0 49138.0 34405.0 42889.0 42590.0 44088.0 47356.0 47392.0 True False 38134.59691410304 39705.0116443917 47459.169237469556 33491.33947064934 45686.71639689729 34124.81708694141 44521.164364761345 41740.50903879137 42235.134680149924 44365.9340781745 41563.084442640335 0.9175112344400516 0.9552951176948166 1.1418586920074758 0.8057953330405373 1.0992138097919038 0.8210366854278055 1.0711708469616432 1.004268802436833 1.0161694024041228 1.0674360354415533 1.0 15.343015101765122 QLS(ph)ESESSLEMDDER ddPTM_A549_MK2206_60min_R1 1 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLS(0.5)ES(0.5)ESSLEMDDER 296.52 1.1400999999999998e-123 8647600.0 1744.2 1995.9 1741.5 1402.3 2635.1 2639.1 1548.8 2519.7 1999.3 2849.9 2951.0 True False 2038.5783184041877 2097.482784821828 1988.470886739243 1745.86356295164 2247.480280695863 2918.3678103071998 1830.1969120080755 2876.8751912576186 1546.4617422260492 2206.1056106584897 2218.185256543309 0.9190297845460346 0.9455850356207051 0.8964404036468804 0.7870684190157734 1.013206752711992 1.3156555800280696 0.8250874928544732 1.2969499201075627 0.6971742949170825 0.9945542664440734 1.0 11.115164144992752 QLS(ph)ESESSLEMDDER ddPTM_A549_PD325901_60min_R1 2 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLS(0.499)ES(0.499)ES(0.002)SLEMDDER;QLS(0.494)ES(0.494)ES(0.003)S(0.009)LEMDDER 327.53 3.1866999999999994e-164 22128000.0 4080.1 4903.9 4360.6 4047.1 5814.6 3528.4 4502.0 4417.200000000001 4581.3 4307.9 4492.3 True False 4494.308748389131 5317.168863238547 4656.536538417969 4297.080175369021 5406.202555281026 3499.6658802372935 4673.326073588928 4329.095480773638 4388.7638928998995 4035.898458809184 3939.77557903598 1.140752476436447 1.3496121178911413 1.1819293878554809 1.0906916115309466 1.3722107888703308 0.8882906678389085 1.1861909339344754 1.0988177864265356 1.1139629161247255 1.024398059697787 1.0 11.943897736619588 -2.0000000372370335 0.06436646297563851 0.8054250804466919 1.9129695600564507 0.26389772199006867 0.11629052962704416 211.57612903042397 0.9843328236197534 3.168497735711225 21.53474505491565 0.009999999142585656 2.0000000372370335 1.1075444796097589 QLS(ph)ESESSLEMDDERYFNEMSAQGLRPR ddPTM_A549_PD325901_60min_R1 2 QLSESESSLEMDDERYFNEMSAQGLRPR 28 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLS(0.688)ES(0.104)ES(0.104)S(0.104)LEMDDERY(0.001)FNEMSAQGLRPR;QLS(0.722)ES(0.222)ES(0.028)S(0.028)LEMDDERYFNEMSAQGLRPR 68.543 0.00012538 26591000.0 1761.82 2008.5900000000001 1642.19 1789.16 2457.8999999999996 2097.65 1936.81 1790.1599999999999 2018.92 2472.8999999999996 2112.3 True False 1940.678669416666 2177.8609284472177 1753.6388886906868 1899.672349722824 2285.265583294677 2080.5674338736408 2010.5163644130976 1754.453854446647 1934.0718133834202 2316.7606719722467 1852.5004909729314 1.0475995438994046 1.1756331180799888 0.946633427216895 1.0254638846142048 1.233611323954067 1.1231130269665563 1.0852986944997658 0.9470733546338816 1.044033090845578 1.250612716844942 1.0 10.855258209554394 -8.054257026904398 17.01442104556934 1.0158605322318477 1.0935797186363991 0.0 0.10288850837164658 12.547691352960575 3934.384738525891 0.011987715476870789 0.015477265430986384 8.82557425114666e-09 8.054257026904398 0.07771918640455144 QLS(ph)EVFETEDSK ddPTM_A549_MK2206_60min_R1 4 QLSEVFETEDSK 12 0 Q99618;F5GX58;F8WDL1 Q99618 CDCA3 Cell division cycle-associated protein 3 1 QLS(1)EVFETEDSK;QLS(0.971)EVFET(0.025)EDS(0.004)K;QLS(1)EVFETEDSK;QLS(1)EVFETEDSK 137.68 2.062e-08 11653300.0 3819.99 5453.32 4373.34 4239.75 7087.299999999999 6068.200000000001 4459.96 4998.7 6417.120000000001 6905.3 6367.4 True False 4464.710922211223 5730.87069498701 4993.545373420733 5278.488940329609 6044.76755848954 6710.332896254843 5270.277001342674 5707.281032876721 4963.652566034925 5345.3879340608655 4786.198848700057 0.9328302194180355 1.1973741326153902 1.0433217530811516 1.1028561719209096 1.262957881520387 1.402017155655241 1.1011404180948507 1.1924454485268265 1.0370761272033369 1.1168336508861694 1.0 12.224664621378453 -8.843421042729515 5.142832202579564 1.016196326605941 1.160395484114177 0.11179175467542024 0.11840348008292481 0.21901459646588403 9.9376812797152 0.020236225368078595 0.021492169618290785 1.4340984198156149e-09 8.843421042729515 0.14419915750823598 QLS(ph)EVFETEDSK ddPTM_A549_PD325901_60min_R1 2 QLSEVFETEDSK 12 0 Q99618;F5GX58;F8WDL1 Q99618 CDCA3 Cell division cycle-associated protein 3 1 QLS(1)EVFETEDSK;QLS(0.802)EVFET(0.198)EDSK 155.28 9.6962e-14 24558000.0 4330.299999999999 5045.9 3966.1 3313.8 6121.2 3860.6 4541.700000000001 4464.3 4027.7 4435.4 4737.6 True False 4769.908868201628 5471.135701587587 4235.263396096754 3518.4858998141526 5691.268028993604 3829.160553577852 4714.536878813599 4375.2560343244 3858.4297757040417 4155.348087049901 4154.9052341208 1.1480186910233987 1.3167895278712196 1.0193405522985313 0.846826991604944 1.369770839117082 0.9215999734800505 1.134691795157446 1.0530338931425058 0.9286444716038165 1.000106585566733 1.0 12.020599856766466 -3.2369597985784977 0.24153104189346175 0.9612845931080526 1.8665483006658783 0.14451560368283478 0.14366822058613424 28.237318124160506 0.5713013494186119 0.07335151151010558 9.197368165770385 0.0005794823349979037 3.2369597985784977 0.9052637075578257 QLS(ph)GQSTSSDTTYK ddPTM_A549_MK2206_60min_R1 1 QLSGQSTSSDTTYK 14 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 QLS(0.96)GQS(0.035)T(0.005)SSDTTYK 148.03 3.0428000000000004e-13 6494400.0 2265.9 2467.3 1745.9 2642.0 2991.8 2125.9 2235.4 2449.0 3448.1 3245.1 3285.1 True False 2648.328524063782 2592.8750313096343 1993.4948729015478 3289.290118603889 2551.7101832134954 2350.8613269417897 2641.5432445137217 2796.1532497479525 2667.110855484239 2512.02965618017 2469.3190058523983 1.0724934760503293 1.0500364777351174 0.8073055235783122 1.3320636624138567 1.033365951165413 0.9520281994226512 1.0697456417146363 1.1323580481585984 1.0800997559096517 1.0172965300257057 1.0 11.26989751175925 QLS(ph)LAAT(ph)ASPPQAPSPNR ddPTM_A549_MK2206_60min_R1 1 QLSLAATASPPQAPSPNR 18 0 Q8NEQ6 Q8NEQ6 C1orf64 Uncharacterized protein C1orf64 2 QLS(0.611)LAAT(0.779)AS(0.611)PPQAPSPNR 66.965 0.0029296999999999995 29810000.0 3854.5 4588.4 3708.4 4717.6 5877.9 4409.7 4025.2 4670.1 6269.7 6315.4 7140.2 True False 4505.04536652273 4821.929961359024 4234.306882792887 5873.412211781113 5013.268696407049 4876.33152707804 4756.526736967263 5332.100976581426 4849.622960653555 4888.746753764212 5367.091280505095 0.8393830346963582 0.8984251821603515 0.7889388611990215 1.0943380510622447 0.9340755419265484 0.9085613178949196 0.8862392100995957 0.9934805834119564 0.9035849601196199 0.9108745311490463 1.0 12.389924709537024 -10.51461559817669 0.012527281808930032 1.9227176722678179 2.4306459849787152e-06 0.08630487758665972 0.07516931774562657 2490.822713358892 7.8224942839975435 633.4853184184985 567.7721935361783 3.0576262756178085e-11 10.51461559817669 -1.922715241621833 QLS(ph)LEGSGLGVEDLK ddPTM_A549_PD325901_60min_R1 2 QLSLEGSGLGVEDLK 15 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 QLS(0.999)LEGS(0.001)GLGVEDLK;QLS(0.997)LEGS(0.003)GLGVEDLK 172.24 2.7875e-27 9304600.0 4243.6 4927.2 4568.7 4637.5 4867.4 4441.6 4877.5 4117.0 4998.0 4835.799999999999 4861.700000000001 True False 4674.407148026796 5342.432436009901 4878.75945582493 4923.947842473334 4525.530615618417 4405.429082207787 5063.115931570411 4034.883205275978 4787.951441013185 4530.466762717207 4263.741720855514 1.0963157372226764 1.2529915707319037 1.1442436655956763 1.154841959208859 1.0613988632290736 1.0332307561359142 1.1874818558555895 0.9463244890139321 1.1229459368032473 1.062556566350406 1.0 12.05790433314227 -2.0000018200122742 0.03726935894016628 0.7018994321391935 1.7646569258018594 0.26637055034556634 0.07184861058711431 609.9437150025402 1.6871667957963261 13.582674159135784 41.887068967538085 0.009999958092756495 2.0000018200122742 1.0627574936626658 QLS(ph)LEGSGLGVEDLKDNTPSGK ddPTM_A549_MK2206_60min_R1 2 QLSLEGSGLGVEDLKDNTPSGK 22 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 QLS(0.994)LEGS(0.006)GLGVEDLKDNTPSGK;QLS(0.999)LEGS(0.001)GLGVEDLKDNTPSGK 264.23 5.382599999999999e-124 181492000.0 17719.1 20223.1 19568.0 16135.9 22510.5 17304.3 15906.3 18157.6 23631.5 23943.5 23653.6 True False 20709.650889597327 21252.369410155978 22343.036641810813 20089.196224368072 19199.235269479042 19135.42954033529 18796.268815517855 20731.49540531785 18279.00298175104 18534.64672051705 17779.758313850507 1.1647880991421813 1.1953126153351754 1.2566558131673529 1.129891411893856 1.0798366845359624 1.0762480120682356 1.0571723464247251 1.1660167162771795 1.0280793843812612 1.0424577428636068 1.0 14.117948092818416 -6.944762345614868 0.29014512868247344 0.9916213147612865 1.267212604800411 0.5928939788355059 0.048484635150300326 1.331787369161153 0.17609811305220105 0.02761498216482839 0.12273392038765704 1.135632085630354e-07 6.944762345614868 0.27559129003912464 QLS(ph)LEGSGLGVEDLKDNTPSGK ddPTM_A549_PD325901_60min_R1 2 QLSLEGSGLGVEDLKDNTPSGK 22 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 QLS(0.602)LEGS(0.398)GLGVEDLKDNTPSGK;QLS(0.996)LEGS(0.004)GLGVEDLKDNTPSGK 276.46 2.1262999999999997e-139 296020000.0 40178.0 48584.0 54115.0 36724.0 58135.0 38356.0 50191.0 46759.0 42133.0 45074.0 40989.0 True False 44256.8409825197 52678.34418556285 57787.56931993036 38992.35807374464 54051.79815486229 38043.64145289127 52101.04597056903 45826.35506327413 40362.29653145426 42228.01994762303 35947.612850679114 1.2311482591724756 1.4654198153401905 1.6075495627476317 1.0846995108051523 1.5036269134027118 1.0583078662530039 1.4493603841509255 1.2748094081693213 1.122808813456211 1.1747099904250045 1.0 15.133608349300701 -8.788647480279366 0.44520836508541656 0.9934483048691694 1.3953029790004638 0.2528821984597044 0.1695410739959023 0.5758589014613151 0.28514503172088784 0.07270467090223338 0.0670618696463945 1.6268687601471714e-09 8.788647480279366 0.4018546741312945 QLS(ph)LPLTQSK ddPTM_A549_MK2206_60min_R1 4 QLSLPLTQSK 10 0 Q9C0I1-3;Q9C0I1-2;Q9C0I1 Q9C0I1-3 MTMR12 Myotubularin-related protein 12 1 QLS(0.989)LPLT(0.011)QSK;QLS(0.991)LPLT(0.009)QSK;QLS(1)LPLTQSK;QLS(0.98)LPLT(0.019)QS(0.001)K 153.64 1.8943e-08 74157400.0 20372.7 22681.0 23861.6 22875.9 32247.2 23331.600000000002 23821.3 22923.0 34507.6 33806.9 32601.0 True False 23811.113695306154 23835.366021616243 27245.53368419013 28480.496526938194 27503.67959760752 25800.53442573738 28149.32186209835 26172.405448743266 26691.683697313852 26169.897810088238 24505.271958172958 0.9716731051158447 0.9726627830248058 1.111823355019051 1.1622191573939837 1.122357656122014 1.0528564820572182 1.1487047321958015 1.068031625742243 1.0892220964889836 1.0679292951637738 1.0 14.580804537336919 -3.2072511528704792 8.994339629322047 1.0599358855642569 0.6539783615147864 0.0 0.06393677394155743 0.0 0.0 0.009213930676019371 0.0 0.0006205100889355243 3.2072511528704792 -0.4059575240494705 QLS(ph)LPLTQSK ddPTM_A549_PD325901_60min_R1 2 QLSLPLTQSK 10 0 Q9C0I1-3;Q9C0I1-2;Q9C0I1 Q9C0I1-3 MTMR12 Myotubularin-related protein 12 1 QLS(0.995)LPLT(0.005)QSK;QLS(0.533)LPLT(0.467)QS(0.001)K 178.52 4.2998e-11 125125000.0 22405.4 23435.5 26130.0 20945.7 28809.0 21051.4 26434.0 26007.0 24038.0 26966.0 23693.0 True False 24679.979714016274 25410.4918318944 27903.338932454593 22239.468317863888 26785.555225654563 20879.96437796942 27439.960335239826 25488.26998290317 23027.76645439674 25263.362157953656 20778.911202301613 1.187741719175476 1.2228981386223818 1.3428681926974033 1.0702903583995533 1.2890740503615807 1.004863256533702 1.3205677654659975 1.226641267906276 1.1082277714265427 1.2158174175726453 1.0 14.34283243974953 -9.403365971432024 0.783285368848616 1.0155062263161427 1.2102346732274032 0.00496629179058794 0.11404936743522504 0.3801100353187764 0.5033149068263559 0.029868758539724302 0.020752193316773027 3.950335927183902e-10 9.403365971432024 0.19472844691126046 QLS(ph)LRLNELPSTLQR ddPTM_A549_MK2206_60min_R1 2 QLSLRLNELPSTLQR 15 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 QLS(1)LRLNELPSTLQR;QLS(1)LRLNELPSTLQR 78.021 0.00014739 7123300.0 572.9000000000001 1064.5500000000002 962.29 651.52 455.05 272.2 410.28999999999996 402.5 576.26 1453.49 1433.83 True False 669.5915139397774 1118.7310479393143 1098.7571918462857 811.1424292478439 388.11274780108994 301.00402332826343 484.83438212021724 459.555607604553 445.73803009812576 1125.1455995073532 1077.770439305148 0.6212747070438036 1.038004947195039 1.0194723772111136 0.7526115021031727 0.36010706329198544 0.27928398511497904 0.44984939690199327 0.4263947041457494 0.41357418411428926 1.0439566335042074 1.0 10.073834207331187 -6.521115122644809 24.913686831430596 0.6159164316739401 0.9038621073882017 0.2266263157679329 0.25675478999770884 91.95132554632093 1298938.0365638155 0.042816823955685764 0.09019810047508907 3.0122074433443623e-07 6.521115122644809 0.28794567571426166 QLS(ph)LRLNELPSTLQR ddPTM_A549_PD325901_60min_R1 2 QLSLRLNELPSTLQR 15 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 QLS(1)LRLNELPSTLQR;QLS(1)LRLNELPSTLQR 157.51 4.6360999999999996e-20 21297000.0 1301.8 1475.92 1597.66 1926.9 1870.1799999999998 3250.3 2570.5 2756.3 2489.6000000000004 2270.2 2182.6 True False 1433.9577776654912 1600.3009581416907 1706.086815110043 2045.9202366925872 1738.825008570747 3223.83063443353 2668.321784131573 2701.3234342244787 2384.9707698172106 2126.859184565243 1914.1540366413503 0.7491339517176839 0.8360356207014779 0.891300690775968 1.0688378247146917 0.9084039086121604 1.684206481151428 1.3939953279901731 1.4112361818928254 1.245965958937126 1.1111222732613064 1.0 10.902491216344302 -6.433676449080831 1.492830928331424 1.1964956340606798 0.8000172506781811 0.4635124016965212 0.200761028960832 0.37972470140945364 1.6179586118516627 0.03447753345397425 0.11526698241915201 3.6840333321165777e-07 6.433676449080831 -0.39647838338249874 QLS(ph)LSSSR ddPTM_A549_MK2206_60min_R1 1 QLSLSSSR 8 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 QLS(0.798)LS(0.073)S(0.122)S(0.007)R 58.273999999999994 0.02256 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QLS(ph)LSSSR ddPTM_A549_PD325901_60min_R1 2 QLSLSSSR 8 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 QLS(0.997)LS(0.003)SSR;QLS(0.802)LS(0.181)S(0.017)SR 114.89 0.001317 16947700.0 4362.3 5390.4 4567.0 4138.9 6100.7 5155.7 4848.2 5598.6 4628.8 5666.0 5528.5 True False 4805.157484644471 5844.667925610448 4876.944083601997 4394.550452876096 5672.207878272442 5113.713688566888 5032.700904036837 5486.931530983265 4434.2676330855975 5308.247793034388 4848.529548048981 0.9910545943930644 1.2054516462547509 1.005860443928706 0.9063676748436927 1.1698820894171726 1.0546937247447765 1.0379849919780244 1.1316691950843472 0.9145592677412722 1.094816013892376 1.0 12.243331560746583 -8.76951949196178 24.99997957003619 0.9596529873785088 1.062971123564778 0.02250092530079839 0.09146860000986205 183.48186007918966 567693.9865879255 0.014071061151455627 0.015109958300009899 1.7001236471493921e-09 8.76951949196178 0.10331813618626928 QLS(ph)MSSADSADAK ddPTM_A549_MK2206_60min_R1 1 QLSMSSADSADAK 13 0 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 QLS(0.709)MS(0.234)S(0.052)ADS(0.005)ADAK 60.208999999999996 0.002921 6487900.0 2937.8 4036.6 2984.2 3077.5 5099.9 3495.4 3712.0 4013.0 5782.8 5337.8 5248.8 True False 3433.628817685943 4242.045698287383 3407.4044330790994 3831.4876381542235 4349.711465796679 3865.2809079412614 4386.4223510937345 4581.855039297069 4473.00503323403 4131.987272736897 3945.3781004895022 0.8702914474179124 1.075193705201809 0.8636445852062552 0.9711331944785854 1.102482792525515 0.9796984748969172 1.111787575074113 1.1613221654798052 1.1337329197115644 1.0472981720622014 1.0 11.945947850442632 -6.66256095626715 5.440403285198332 1.0715467899532702 0.9454971107906633 0.43340192714948633 0.07260840006635445 0.1788096930120559 8.153316857195708 0.01116566718986877 0.023483390458577256 2.1748987503490323e-07 6.66256095626715 -0.1260496791626069 QLS(ph)MSSADSADAK ddPTM_A549_PD325901_60min_R1 2 QLSMSSADSADAK 13 0 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 QLS(0.91)MS(0.074)S(0.016)ADSADAK;QLS(0.92)MS(0.059)S(0.02)ADSADAK 88.95100000000001 6.7225e-05 30779000.0 14117.7 15036.1 16212.8 13437.2 17762.9 14361.3 16077.6 15710.1 16931.3 18690.8 16502.7 True False 15550.91851109857 16303.244916197544 17313.098103486413 14267.185325904624 16515.295182678306 14244.346334273832 16689.441866000296 15396.749731164973 16219.736341181773 17510.65969820811 14472.972519234494 1.0744799308111372 1.1264614020741508 1.1962365077718076 0.9857812765790593 1.1411128681913532 0.9842032322899239 1.153145412514266 1.0638277458692598 1.1206914349920751 1.2098868891609202 1.0 13.821073638553829 -10.861809283151839 0.9834340779298004 0.9970191937042071 1.0956525316704921 0.0 0.08815301789849746 0.6445006958838045 1.0501290074381024 0.04665381656857442 0.010021463452865345 1.3746455067479166e-11 10.861809283151839 0.09863333796628504 QLS(ph)MSSADSADAKR ddPTM_A549_MK2206_60min_R1 3 QLSMSSADSADAKR 14 1 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 QLS(0.892)MS(0.08)S(0.023)ADS(0.005)ADAKR;QLS(0.928)MS(0.047)S(0.025)ADSADAKR;QLS(0.993)MS(0.006)SADSADAKR 92.47399999999999 2.5599e-05 48077000.0 12986.0 14608.300000000001 11962.599999999999 12220.8 19323.8 13596.599999999999 11090.8 12332.9 21526.9 22395.199999999997 21948.6 True False 15177.719322782239 15351.800072905817 13659.076560268093 15214.896548612558 16481.294618083073 15035.38318730737 13105.854798359469 14081.126342922216 16651.091521395454 17336.108765858105 16498.15686945661 0.9199645416683531 0.93051606881778 0.8279153040152888 0.9222179585878604 0.9989779312012269 0.911337145493064 0.794382966658695 0.8534969363148017 1.0092698022663353 1.0507906369803535 1.0 14.010017238940446 -8.773728820842368 24.988230410780485 1.0043774191150443 0.8953924653614174 0.5091091662721999 0.054146145565743015 145.98304743194805 296827.6548120188 0.009535320020911814 0.010186897131377366 1.6837250728721054e-09 8.773728820842368 -0.10898495375362693 QLS(ph)MSSADSADAKR ddPTM_A549_PD325901_60min_R1 3 QLSMSSADSADAKR 14 1 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 QLS(0.697)MS(0.235)S(0.053)ADS(0.015)ADAKR;QLS(0.984)MS(0.011)S(0.005)ADSADAKR;QLS(0.994)MS(0.002)S(0.002)ADS(0.002)ADAKR 75.743 0.00034937 27272200.0 11848.6 11743.5 11251.5 10786.1 13585.900000000001 10430.3 11640.3 11261.2 12825.9 13757.5 14940.2 True False 13051.461149521685 12733.165958816831 12015.0944507659 11452.332899989578 12631.673252810595 10345.35909495494 12083.277986316574 11036.586531759507 12286.872026268707 12888.849102130358 13102.650113730908 0.996093235813755 0.9718008073399689 0.9169972750912959 0.8740470668592546 0.9640548395300006 0.7895623408361895 0.9222010724115968 0.8423171218007057 0.9377394587826697 0.9836826130786704 1.0 13.677571017210228 -9.771593184393003 1.0897519820503547 0.989215585201699 0.9100201044187037 0.22066304957747251 0.056962875598344405 0.4464738520213887 1.0851731455375366 0.01720881002837428 0.011001159438696978 1.6920251561169317e-10 9.771593184393003 -0.07919548078299532 QLS(ph)MTLR ddPTM_A549_MK2206_60min_R1 2 QLSMTLR 7 0 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 QLS(0.983)MT(0.017)LR;QLS(0.634)MT(0.366)LR 89.88600000000001 0.0126 28630000.0 1803.65 2716.2 2338.4 1952.88 2800.7 2223.14 1859.8400000000001 2087.83 3008.7 3042.4 3632.4 True False 2108.062024991236 2854.4429781717763 2670.0202822572755 2431.3356876681155 2388.720740064856 2458.3911991991017 2197.7488538411008 2383.786296211213 2327.2342539066235 2355.119726961432 2730.374830860018 0.7720778851185187 1.04543996886782 0.9778951417510204 0.8904768899082949 0.8748691619430335 0.900385973168656 0.804925693352092 0.8730619214873016 0.8523497314738971 0.8625627882086844 1.0 11.414883305222052 -10.88727912552777 1.1511026971205172 0.9996641692778885 0.8894390274802207 0.0 0.08117379550779026 0.5644936038156648 1.3346139643893444 0.049023530467711664 0.011916172184873388 1.2963458283921251e-11 10.88727912552777 -0.11022514179766774 QLS(ph)MTLR ddPTM_A549_PD325901_60min_R1 2 QLSMTLR 7 0 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 QLS(0.749)MT(0.251)LR;QLS(0.976)MT(0.024)LR 93.111 0.012191 30762100.0 3424.0 4176.8 4340.9 4219.0 4939.3 3619.6 4340.6 4968.6 3954.7 4951.2 4663.4 True False 3771.601959384422 4528.793594480878 4635.499577952247 4479.598047955795 4592.380607659956 3590.1231776745567 4505.783908267457 4869.497375208706 3788.4977118397023 4638.580387022922 4089.8313637282445 0.9221900914629086 1.1073301541588454 1.1334207124194424 1.0953014072130942 1.12287774219463 0.8778169216253064 1.1017040820382469 1.190635246820966 0.9263212526166728 1.1341739975299236 1.0 11.997825642320867 -8.798154885868152 24.999767197345385 0.965207247390245 1.0697428542564078 0.0 0.10200739637834773 184.53086536103527 125647.18338148382 0.015294489144834944 0.01628245935741977 1.5916409863334704e-09 8.798154885868152 0.10453560686616281 QLS(ph)PEAQAR ddPTM_A549_PD325901_60min_R1 1 QLSPEAQAR 9 0 A0A0U1RRH6;O94880;B4DG57;O94880-2 A0A0U1RRH6 PHF14 PHD finger protein 14 1 QLS(1)PEAQAR 82.171 0.0015345 8455600.0 1076.4 1118.6 1355.4 845.13 1486.8 1158.3 1160.8 1142.3 1446.1 1136.0 1359.9 True False 1185.6753355962014 1212.8683477270415 1447.3855946823185 897.3317606705099 1382.3722971815473 1148.867188833141 1204.9748792141334 1119.5159303829862 1385.3254459482123 1064.2727661290266 1192.6409211163614 0.9941595283233784 1.0169601983736618 1.2135971263903182 0.7523905517434117 1.1590850797636472 0.9632968050079597 1.01034171969064 0.9386864986445986 1.1615612221753133 0.892366467798894 1.0 10.219944028196053 -8.753464106936786 24.999627843187948 1.0762928008714099 1.0087074780697367 0.0 0.12949526523213256 395.060060083113 1238369.3995680935 0.01954031825579931 0.021967193755301522 1.7641515599896907e-09 8.753464106936786 -0.06758532280167318 QLS(ph)PEDSSSPVK ddPTM_A549_MK2206_60min_R1 2 QLSPEDSSSPVK 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 QLS(0.822)PEDS(0.098)S(0.052)S(0.028)PVK;QLS(0.999)PEDS(0.001)SSPVK 101.62 0.00022394 13981200.0 7118.0 8131.8 7503.0 6360.700000000001 10612.8 7821.3 7633.2 8263.9 11609.8 11355.7 11233.7 True False 8319.344381608193 8545.673886273928 8567.03822176546 7919.07178554267 9051.671178691144 8648.944774641242 9020.0536342588 9435.333132132339 8980.198837040947 8790.439483123828 8444.062255652514 0.9852301096002893 1.0120335008844108 1.0145636024924645 0.9378272620197214 1.0719569449682695 1.0242635017111081 1.068212592608577 1.1173926537332504 1.0634927319525078 1.0410202124267198 1.0 13.043721499963695 -6.7787742251213166 24.99988451612679 1.0422733635296588 0.9911114437763124 0.43460282998066857 0.035189916192292614 254.55570736178927 367113.48972439277 0.006017296551886703 0.011390955243903902 1.6642776266512142e-07 6.7787742251213166 -0.051161919753346385 QLS(ph)PEDSSSPVK ddPTM_A549_PD325901_60min_R1 2 QLSPEDSSSPVK 12 0 Q96AY2;Q96AY2-2 Q96AY2 EME1 Crossover junction endonuclease EME1 1 QLS(0.969)PEDS(0.029)S(0.002)SPVK;QLS(0.983)PEDS(0.004)S(0.01)S(0.003)PVK 155.56 9.4787e-14 20661200.0 13267.0 15064.1 12673.8 12256.3 16061.2 13836.1 12354.8 13389.3 14327.5 16146.1 18056.7 True False 14613.856073350807 16333.60457446355 13533.920281750594 13013.34381492311 14933.116720132008 13723.423388944337 12824.968674805963 13122.239907797351 13725.365000223363 15126.632490489332 15835.840370852124 0.9228342627303484 1.03143276213668 0.8546385897310189 0.8217652811704154 0.9429949008338266 0.8666053122260592 0.8098697874229616 0.8286418403124662 0.86672792089308 0.9552150145647983 1.0 13.95090580938418 -10.67337985346812 0.9963607029889106 0.998296654911553 0.8823109793776919 0.24883090855453738 0.062010061923024815 0.5129787617087672 0.9258452771371682 0.04053288869846012 0.011384916989407143 2.121388188897824e-11 10.67337985346812 -0.11598567553386108 QLS(ph)PQSK ddPTM_A549_MK2206_60min_R1 2 QLSPQSK 7 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 QLS(0.997)PQS(0.003)K;QLS(0.856)PQS(0.144)K 82.749 0.014821 1011100000.0 19415.2 20737.0 18151.800000000003 16814.2 24579.0 17569.1 16739.7 17124.2 27537.0 28092.0 28517.0 True False 22692.011103933604 21792.424725111607 20725.998186571018 20933.67975481812 20963.461659604407 19428.250500575276 19781.086807813503 19551.607790663078 21299.913467552993 21745.99768925866 21435.441870838877 1.0586211024090988 1.0166538602947288 0.9669032395719821 0.9765919396929549 0.97798131645345 0.9063610919542453 0.9228215087426779 0.9121159203749097 0.993677368346194 1.0144879597206844 1.0 14.387710536769525 -5.48935181406969 2.7397265683052687 0.9761738305591466 1.0590830467426045 0.3676174718073384 0.036112983629172216 0.31886882954989654 4.150429980779201 0.005761136238903536 0.046486397106105797 3.2407698211019587e-06 5.48935181406969 0.08290921618345781 QLS(ph)PQSK ddPTM_A549_PD325901_60min_R1 2 QLSPQSK 7 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 QLS(0.991)PQS(0.009)K;QLS(0.944)PQS(0.056)K 96.03399999999999 0.01182 1510250000.0 20799.8 19930.8 22673.5 21024.8 24823.1 22384.1 23210.4 23555.9 24123.4 24479.2 24494.9 True False 22911.38038399652 21610.438463148676 24212.260056831597 22323.45414521473 23079.611091046063 22201.811311024703 24093.68447321823 23086.059095253928 23109.577389383252 22933.579134353608 21482.18258596453 1.0665294502694416 1.005970337356128 1.1270856655250094 1.0391613634175072 1.0743606241446444 1.0334988645674368 1.1215659478176083 1.0746607800613937 1.0757555614708343 1.0675628066459761 1.0 14.390852957881288 -10.66715679063423 0.9019131979946045 0.9994050974881301 1.0686401570961985 0.005890926938638796 0.038794998962780027 0.4906100634018853 0.7011091464455383 0.02230640864276438 0.0057315205547326074 2.1520046696091625e-11 10.66715679063423 0.06923505960806842 QLS(ph)SGVSEIR ddPTM_A549_MK2206_60min_R1 5 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.584)S(0.413)GVS(0.003)EIR;QLS(0.486)S(0.486)GVS(0.027)EIR;QLS(0.5)S(0.5)GVSEIR;QLS(0.765)S(0.208)GVS(0.026)EIR;QLS(0.853)S(0.07)GVS(0.077)EIR 154.74 1.7014e-08 4574957000.0 22984.7 24830.6 23802.7 19799.800000000003 29309.8 19441.999999999996 19003.5 19926.6 28611.1 27859.8 28948.5 True False 26863.955438037356 26094.371479932295 27178.280778517495 24650.751888846793 24998.367246457296 21499.339535444873 22456.189964711677 22751.256572653143 22130.731532538233 21566.25183052858 21759.78851204473 1.2345687745617244 1.199201520983912 1.2490140133243233 1.1328580640938593 1.1488331898363768 0.9880307211416282 1.0320040542802824 1.0455642323940604 1.017047179492952 0.9911057645891631 1.0 14.409376914349696 -6.905220028616379 1.3130349915130943 1.010832048573386 1.2247057781822899 0.8995115999457646 0.03054565655918976 0.08307777123236083 0.28459001849661336 0.004339733623019631 0.01085358017426862 1.2438842572869715e-07 6.905220028616379 0.21387372960890394 QLS(ph)SGVSEIR ddPTM_A549_PD325901_60min_R1 6 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.498)S(0.498)GVS(0.003)EIR;QLS(0.5)S(0.5)GVSEIR;QLS(0.843)S(0.065)GVS(0.092)EIR;QLS(0.491)S(0.491)GVS(0.017)EIR;QLS(0.976)S(0.024)GVSEIR;QLS(0.485)S(0.485)GVS(0.029)EIR 164.68 3.8876e-09 6582524000.0 36670.700000000004 45291.600000000006 50035.4 39826.6 54639.4 43438.799999999996 43940.7 42605.0 39645.1 41682.99999999999 41006.90000000001 True False 40393.48246845748 49108.48208288404 53431.10313130269 42286.59862922881 50801.71703969697 43085.04881488822 45612.88738377367 41755.209852024054 37978.95431654899 39051.1282663347 35963.31126415659 1.1231858538208712 1.3655161428872318 1.4857114446120443 1.1758260611384366 1.4125984302877392 1.1980278595155287 1.2683172316569882 1.1610502032286458 1.056047204262899 1.0858601973410507 1.0 15.134238240347502 -8.44490344532883 0.9527255179108396 1.0147388181867698 1.3149044683062017 0.5264478041353493 0.1014475669563285 0.22199519472529577 0.39581296853405895 0.019638490051240905 0.023902371800036307 3.590017409596445e-09 8.44490344532883 0.30016565011943186 QLS(ph)TEQAVLQESLEK ddPTM_A549_MK2206_60min_R1 1 QLSTEQAVLQESLEK 15 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 QLS(0.958)T(0.042)EQAVLQESLEK 178.51 7.6642e-28 6507000.0 1479.2 1933.0 1798.0 1566.6 2486.0 2162.5 1863.1 1793.6 2442.0 2301.7 2467.4 True False 1728.8527970321502 2031.3814434894493 2052.9834363233767 1950.4170703273458 2120.3126931842858 2391.3343146486754 2201.6011536429764 2047.84829266963 1888.8908990726811 1781.7443713999241 1854.676483224318 0.9321586878734636 1.095275354954592 1.1069226654312811 1.0516211792024153 1.143225092010745 1.2893538772278972 1.1870540083710648 1.1041539110419336 1.0184476463457832 0.9606766395734944 1.0 10.856951839835585 -8.750237394779733 4.0707370975628105 1.0080084928821909 1.1209921767315625 0.2875985836636834 0.08359841819599774 0.21614678082095298 7.960028504647944 0.015011036491874366 0.016482358177311 1.7773076295809087e-09 8.750237394779733 0.11298368384937163 QLS(ph)VSDR ddPTM_A549_MK2206_60min_R1 1 QLSVSDR 7 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 QLS(0.595)VS(0.405)DR 87.806 0.012863999999999999 61412000.0 3261.6 3258.9 3277.2 3662.4 6301.5 5454.4 5217.1 5106.4 7354.7 7463.6 7570.0 True False 3812.0783415360047 3424.764090112657 3741.9562388870795 4559.6881644113855 5374.557697546575 6031.580987662306 6164.979538763769 5830.247837694136 5688.872193042525 5777.567576304679 5690.160078628552 0.6699421965040385 0.6018748229905857 0.6576187993271658 0.801328627209793 0.9445354125857838 1.0600019866428863 1.0834457121722414 1.0246193001830888 0.999773664436812 1.015361166727878 1.0 12.47425352443384 -6.588060430206228 1.8838784137953943 1.012605959470269 0.633534648915699 0.9647555542232319 0.03202833350607651 0.04852231512023724 0.34386874751046675 0.0053628523493010494 0.014091330381468512 2.581900905250465e-07 6.588060430206228 -0.37907131055457 QLS(ph)VSDR ddPTM_A549_PD325901_60min_R1 2 QLSVSDR 7 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 QLS(0.873)VS(0.127)DR;QLS(0.549)VS(0.451)DR 99.01299999999999 0.011442 161560000.0 12076.4 13238.5 12121.3 12103.099999999999 15160.900000000001 10731.7 12891.6 13044.8 12124.6 13610.8 13845.0 True False 13302.387237824205 14354.154855519795 12943.924309298192 12850.680998865551 14096.050686265633 10644.304593283792 13382.196892554208 12784.61123055237 11615.045226432263 12751.41176516634 12142.152770686107 1.0955542636507725 1.182175445047435 1.0660320746867675 1.0583527683731662 1.160918574529607 0.876640641433992 1.1021272047294486 1.0529114129923733 0.956588625245566 1.0501771807674107 1.0 13.567736609730568 -6.897438911776534 0.5663676741653598 0.9824814955480486 1.144303954522223 0.22596493652662875 0.07309996330975115 0.8216781050473537 0.4390471596131426 0.014126303930877607 0.06302316748732606 1.2663713838370274e-07 6.897438911776534 0.16182245897417447 QLSALS(ph)S(ph)DGEGQGRPVPR ddPTM_A549_PD325901_60min_R1 1 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 2 QLS(0.444)ALS(0.667)S(0.889)DGEGQGRPVPR 74.428 0.0016795000000000002 13474000.0 3731.1 3859.5 3855.6 2869.5 3926.4 3850.5 3506.5 3489.1 3476.7 3860.2 4046.9 True False 4109.878525309353 4184.753609916429 4117.264201606274 3046.7424978926633 3650.62320934465 3819.142804629204 3639.9417763304255 3419.5071633539997 3330.5863895499274 3616.466313214145 3549.1569554127545 1.15798725639379 1.1790838394831589 1.160068222772484 0.858441183686208 1.0285888325612513 1.076070416892862 1.025579263486563 0.9634702568278847 0.9384162017603958 1.018964886210157 1.0 11.793260661199184 -6.181810962967666 9.36435899150274 0.9793474016638807 1.1678249394006195 0.6740235242149741 0.05454666125037403 0.18909862529893082 21.160788033898445 0.007720595691910778 0.020476299468806837 6.579441609260899e-07 6.181810962967666 0.1884775377367388 QLSALS(ph)SDGEGQGRPVPR ddPTM_A549_MK2206_60min_R1 1 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 QLSALS(0.787)S(0.213)DGEGQGRPVPR 153.88 3.4078000000000004e-19 72919000.0 3809.1 4337.5 4170.6 4563.3 5297.1 4110.9 3743.3 3755.4 6149.7 6707.1 5823.6 True False 4451.982956446161 4558.260223039571 4762.053792842198 5681.30870485432 4517.903607025939 4545.912709405427 4423.409155939971 4287.739450430156 4756.802769052934 5191.961451716746 4377.439396816543 1.0170290329282066 1.0413074425095477 1.0878628716836978 1.2978611900340653 1.0320882135596319 1.0384867264436386 1.0105015181151016 0.97950858064383 1.0866633065239646 1.1860727199313272 1.0 12.095871490158737 -6.911154721049698 20.52555019048535 1.034001273228306 1.111953289688323 0.1006372052391109 0.08514685620417306 6.941641817688162 1598.7734092464075 0.010793573936302018 0.020398002531781464 1.2270020235272326e-07 6.911154721049698 0.07795201646001715 QLSALS(ph)SDGEGQGRPVPR ddPTM_A549_PD325901_60min_R1 2 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 QLSALS(0.817)S(0.183)DGEGQGRPVPR;QLSALS(0.876)S(0.124)DGEGQGRPVPR 198.47 3.7723e-49 262610000.0 12157.1 12604.6 12945.0 12346.0 15762.0 12012.6 14016.3 13294.5 13336.1 13851.5 14759.0 True False 13391.27984241599 13666.833877847543 13823.52554460868 13108.584380199638 14654.93149594805 11914.773368364835 14549.697966513653 13029.330768166508 12775.630094536997 12976.913926088224 12943.73656500947 1.034576049594238 1.0558646499954893 1.0679702476313928 1.0127357208146368 1.1322025461769993 0.9205049336814989 1.1240724726927418 1.0066127893384684 0.9870125238080855 1.0025631981083762 1.0 13.659966530546331 -8.501432690647132 24.440087220930597 0.9940220525975967 1.0487051165018904 0.17439930327943365 0.053224224395453316 647.874070346934 738323.4581723673 0.007696429241036363 0.009257644950672725 3.151862835428771e-09 8.501432690647132 0.05468306390429367 QLSALSS(ph)DGEGQGRPVPR ddPTM_A549_MK2206_60min_R1 1 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 QLSALS(0.264)S(0.736)DGEGQGRPVPR 252.37 4.6373999999999986e-87 82426000.0 5559.7 6210.0 5056.3 4510.8 6960.4 5098.8 4905.4 5625.0 7149.5 7151.4 7952.5 True False 6498.041438385374 6526.062474945415 5773.359371013287 5615.946202497506 5936.534380386127 5638.351631690482 5796.647683473919 6422.360975840023 5530.149665405457 5535.893773136994 5977.674772165593 1.0870516858231922 1.0917393005944938 0.9658202547077873 0.9394867430137823 0.9931176597343448 0.9432349277255542 0.9697161361915159 1.07439116723865 0.9251339151397148 0.9260948419131625 1.0 12.54536869098762 -5.760758250507784 24.99557047859224 0.9704942924870794 1.08939553691992 0.5619952988544873 0.0403888160241902 9.20071546797976 337566.8687968156 0.00562745611140423 0.019502583168575647 1.7347693862953185e-06 5.760758250507784 0.11890124443284056 QLSALSS(ph)DGEGQGRPVPR ddPTM_A549_PD325901_60min_R1 2 QLSALSSDGEGQGRPVPR 18 1 O15438-2;O15438;O15438-4;H0Y8Q6 O15438-2 ABCC3 Canalicular multispecific organic anion transporter 2 1 QLS(0.003)ALS(0.213)S(0.784)DGEGQGRPVPR;QLS(0.001)ALS(0.285)S(0.714)DGEGQGRPVPR 113.36 2.2358000000000002e-10 33961000.0 3826.8 4142.9 4315.0 4891.0 5391.1 3567.2 3577.4 5553.4 5687.8 5852.9 6058.9 True False 4215.293918858734 4492.036722508812 4607.841848202894 5193.105961733063 5012.447734285338 3538.1499059013904 3713.5399146283935 5442.6330804419795 5448.761545857302 5483.346895137834 5313.693710531599 0.7932888398336047 0.8453699003398926 0.86716361522123 0.9773062288931832 0.9433076137510147 0.665855071565166 0.6988622447824301 1.0242654878008541 1.0254188221383558 1.0319275430328223 1.0 12.375499355728692 -8.291239573498949 24.62036191268726 1.0132583970314961 0.8335562633003921 0.5332381793207774 0.08668617724649906 383.38829184767525 316747.1230711375 0.015198837469188207 0.01837589128890684 5.113996500472728e-09 8.291239573498949 -0.179702133731104 QLSES(ph)ESSLEMDDER ddPTM_A549_MK2206_60min_R1 5 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLS(0.308)ES(0.5)ES(0.075)S(0.117)LEMDDER;QLS(0.017)ES(0.961)ES(0.017)S(0.004)LEMDDER;QLS(0.009)ES(0.974)ES(0.006)S(0.01)LEMDDER;QLS(0.022)ES(0.936)ES(0.036)S(0.006)LEMDDER;QLS(0.287)ES(0.695)ES(0.018)SLEMDDER 248.2 1.7873999999999998e-76 39211300.0 3431.2200000000003 4230.17 3647.14 3589.6 5495.24 4619.18 5201.88 5411.88 6325.900000000001 5777.589999999999 6070.35 True False 4010.326050725157 4445.467584483068 4164.359293633172 4469.05216114327 4686.89747550041 5107.978561636472 6146.9942617746365 6179.0305631874 4893.093750386516 4472.428406289475 4562.914561862989 0.8788957137711086 0.9742605355003692 0.9126533572289612 0.9794292881343374 1.0271718683215494 1.1194552280967844 1.347164006346173 1.3541850235005426 1.0723614663494199 0.9801692198381707 1.0 12.155739925004811 -6.7961321094607134 2.300556089455254 1.0923196253953877 0.9299456434213186 0.35750908940421633 0.12134079876093996 0.37117477391277576 4.00668853564676 0.02103396600840063 0.046226415869373774 1.599071527818467e-07 6.7961321094607134 -0.16237398197406916 QLSES(ph)ESSLEMDDER ddPTM_A549_PD325901_60min_R1 4 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLS(0.024)ES(0.917)ES(0.024)S(0.036)LEMDDER;QLS(0.013)ES(0.652)ES(0.167)S(0.167)LEMDDER;QLS(0.002)ES(0.996)ES(0.002)SLEMDDER;QLS(0.209)ES(0.787)ES(0.002)S(0.002)LEMDDER 169.25 3.7497e-27 19825800.0 4455.070000000001 4513.86 4361.2300000000005 4475.75 5306.01 3191.61 4507.32 4319.179999999999 4177.25 4666.9400000000005 4562.95 True False 4907.345426750805 4894.258823593046 4657.2092940064695 4752.206912334238 4933.334162340775 3165.6185863349233 4678.848529100142 4233.0305665688375 4001.694709278175 4372.2686119350365 4001.736076923233 1.2263041171180527 1.2230338856719498 1.1637972131303578 1.1875363144857896 1.2327984823361486 0.7910613107621116 1.1692046749613512 1.0577985367349456 0.9999896625753766 1.0925929466334747 1.0 11.966410306211154 -7.201456946010812 24.99983388673982 1.0058540440869765 1.2041544459838975 0.5246414420262155 0.0887705781623663 129.68955263114702 54052.679064199285 0.011418324434258323 0.01977711639942085 6.288441917948932e-08 7.201456946010812 0.198300401896921 QLSES(ph)FK ddPTM_A549_MK2206_60min_R1 2 QLSESFK 7 0 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 QLS(0.019)ES(0.981)FK;QLS(0.002)ES(0.998)FK 86.624 0.013066999999999999 112323000.0 10035.5 9997.5 9034.5 9169.2 14501.8 11775.3 11550.3 11581.5 16100.5 11795.9 12865.3 True False 11729.247055581489 10506.330047224928 10315.727950758366 11415.654411621032 12368.604430418289 13021.354430188461 13648.840000495136 13223.213091856218 12453.762457215267 9131.197997391651 9670.490945783344 1.2128905472680094 1.0864319201711303 1.0667222593550296 1.1804627578498108 1.2790048095553423 1.3465039679155282 1.4113905981625974 1.367377640493214 1.2878107768298488 0.9442331365165239 1.0 13.239373418114749 -4.087384835840012 16.215544125647547 1.187806491746349 1.1743074662563826 0.0 0.1495323383503434 0.0 0.0 0.02154434896540148 0.0 8.177398535883403e-05 4.087384835840012 -0.013499025489966288 QLSES(ph)FK ddPTM_A549_PD325901_60min_R1 2 QLSESFK 7 0 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 QLS(0.117)ES(0.883)FK;QLSES(1)FK 86.882 0.012981 139314000.0 6729.900000000001 6946.5 7084.0 6375.1 8282.0 5463.0 6322.4 6463.2 7235.1 7226.200000000001 6873.799999999999 True False 7413.114493709468 7531.90593374387 7564.762839552561 6768.875448097413 7700.3008913489275 5418.511139251875 6563.002391750032 6334.286405717684 6931.033907737994 6769.936498768997 6028.366176608313 1.2297054088177908 1.2494108209567125 1.254861204169362 1.1228374736694786 1.277344584877437 0.8988357675214156 1.0886867518460062 1.0507467894529074 1.1497367121845177 1.1230134833279002 1.0 12.557551336822124 -7.233149447318892 24.99978267914807 1.0614479498219778 1.2238660062130935 0.5910429677365285 0.07222084189713411 461.7569749228982 408054.4215805859 0.011400755832720167 0.01974392087914133 5.845888836260999e-08 7.233149447318892 0.16241805639111573 QLSES(ph)FKSK ddPTM_A549_MK2206_60min_R1 2 QLSESFKSK 9 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 QLS(0.004)ES(0.995)FKS(0.001)K;QLS(0.118)ES(0.879)FKS(0.003)K 80.469 0.00046581 168793000.0 13458.3 14315.4 13748.6 11270.0 14705.300000000001 11310.2 12528.9 11399.2 16945.3 17736.3 18452.1 True False 15729.73201615588 15043.99271398287 15698.358216148825 14031.150505929521 12542.169849993114 12507.037856896863 14805.238953291555 13015.071508585886 13107.216606083652 13729.657511604679 13869.934317947413 1.1340884286526092 1.0846477257297642 1.1318264280340151 1.0116234283657348 0.9042703132172588 0.901737352909668 1.0674339628367149 0.9383657636896412 0.9450092773058903 0.9898862674381076 1.0 13.759673335242983 -6.39570442128235 4.1555127529733245 0.9680295979185658 1.113057404069418 0.6779236804712352 0.045873760295424754 0.10614977513193828 3.0659455204344597 0.006554444837357119 0.015822900650950954 4.0206436080357055e-07 6.39570442128235 0.1450278061508523 QLSES(ph)FKSK ddPTM_A549_PD325901_60min_R1 2 QLSESFKSK 9 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 QLS(0.02)ES(0.979)FKSK;QLS(0.003)ES(0.996)FKSK 97.551 0.00023971 342550000.0 22071.1 23903.5 24917.0 20336.0 27496.2 19524.2 25934.2 25503.0 24882.3 23145.4 21586.6 True False 24311.741824114928 25917.931834340554 26608.01745809306 21592.10853359304 25564.961768740417 19365.20138842789 26921.14017273878 24994.322658283523 23836.58346152909 21683.99549398132 18931.585048731857 1.2841894517302166 1.3690312653496852 1.4054828156016137 1.1405335833218784 1.3503867585800957 1.0229043864303944 1.4220225144086447 1.320244585645922 1.2590907417509554 1.1453872160288996 1.0 14.208507585425378 -10.521312842912096 0.5697312168694071 0.9660637624539647 1.293109969313664 0.29380161091237134 0.11914421349620191 0.7260250080293058 0.3663460342240291 0.12139047652186437 0.02443066048748214 3.0108363945899233e-11 10.521312842912096 0.3270462068596993 QLSESES(ph)SLEMDDER ddPTM_A549_MK2206_60min_R1 1 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLSES(0.014)ES(0.613)S(0.372)LEMDDER 72.652 0.00037133 1992100.0 533.69 598.81 739.96 429.24 646.31 645.99 589.89 446.47 650.16 1113.5 595.23 True False 623.7638245322389 629.2868712756945 844.897454695131 534.403819269316 551.2386551616797 714.3482330265426 697.0653773401621 509.7584897570304 502.8997980921763 861.9595766406636 447.4179634877241 1.3941412179114558 1.406485484780855 1.8883851871055077 1.1944174415875428 1.2320440843828664 1.5966015925199712 1.5579736046053672 1.139333981549037 1.124004486033504 1.926519824822173 1.0 8.805479370432819 -8.379565162825457 4.2920551204236475 1.0616127020030004 1.4659035555375206 0.0 0.3160246913232047 0.13891941602681315 4.273982522155396 0.029939071546066717 0.03634741635559311 4.17286982797804e-09 8.379565162825457 0.4042908535345202 QLSESES(ph)SLEMDDER ddPTM_A549_PD325901_60min_R1 3 QLSESESSLEMDDER 15 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLS(0.016)ES(0.079)ES(0.513)S(0.392)LEMDDER;QLSES(0.007)ES(0.501)S(0.492)LEMDDER;QLSES(0.008)ES(0.496)S(0.496)LEMDDER 97.836 1.3623e-05 8521100.0 2009.36 1960.58 1888.6399999999999 2129.82 2715.75 2177.2 2242.98 2305.79 2560.82 2328.75 2321.69 True False 2213.3487479873497 2125.8049572561094 2016.8144677149266 2261.37414422783 2525.0050888288874 2159.4696050483603 2328.337831305751 2259.799209592738 2453.197640891434 2181.7123275730387 2036.1368484055058 1.0870333935170509 1.04403835082147 0.9905102740487652 1.1106199202665121 1.2400959644761664 1.0605719388357595 1.143507536406046 1.109846428722304 1.2048294508360415 1.0714959209551818 1.0 10.99161881261852 -6.300954265121819 20.175860503477903 1.111337179193901 1.0408785569767698 0.20999194723593284 0.0657784995913021 87.26343783502394 44555.536126217354 0.011900114853810196 0.027655550578097123 5.000871956109246e-07 6.300954265121819 -0.07045862221713128 QLSFIS(ph)PPTPQPK ddPTM_A549_PD325901_60min_R1 2 QLSFISPPTPQPK 13 0 O43395;O43395-3 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 QLSFIS(0.545)PPT(0.455)PQPK;QLSFIS(0.988)PPT(0.012)PQPK 170.79 1.1195e-21 41030000.0 7080.1 7336.0 8088.3 7370.6 9114.5 7507.0 8284.1 9329.7 7840.4 8061.200000000001 8720.4 True False 7798.866539905856 7954.230465694236 8637.220676899062 7825.865222152877 8474.328963318014 7445.865480937915 8599.355958733464 9143.61181449194 7510.895253725442 7552.214456266997 7647.846083170172 1.0197467960381708 1.0400615257148405 1.1293664363756097 1.0232770295121987 1.1080674050131052 0.9735898709210773 1.124415406013097 1.195579999264544 0.9820928889055307 0.9874956130310177 1.0 12.90083777329435 QLSFISPPT(ph)PQPK ddPTM_A549_MK2206_60min_R1 2 QLSFISPPTPQPK 13 0 O43395;O43395-3 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 QLSFIS(0.035)PPT(0.965)PQPK;QLSFIS(0.314)PPT(0.686)PQPK 146.78 1.6293e-12 22790000.0 5627.700000000001 5680.6 5020.200000000001 4420.0 6974.7 6478.9 5643.4 6533.4 8917.5 7906.299999999999 8176.200000000001 True False 6577.518175944992 5969.71827619564 5732.139848181655 5502.900198421338 5948.730869329221 7164.492897654249 6668.732730647191 7459.52945769835 6897.700488321307 6120.261338836178 6145.823888359681 1.070241890335151 0.9713454834757649 0.932688595102513 0.8953885269709642 0.9679305781274079 1.165749788441538 1.085083603400662 1.213755810970577 1.122339431395959 0.9958406635159333 1.0 12.585390711041315 -7.157364851842932 8.764012049624624 1.0810996041690202 0.9612350647036904 0.43417089329284764 0.07228595008183214 0.3031661757194243 23.43750778874967 0.011793467730744052 0.02045848363624372 6.960415222550713e-08 7.157364851842932 -0.11986453946532982 QLSLAAT(ph)AS(ph)PPQAPSPNR ddPTM_A549_MK2206_60min_R1 1 QLSLAATASPPQAPSPNR 18 0 Q8NEQ6 Q8NEQ6 C1orf64 Uncharacterized protein C1orf64 2 QLS(0.533)LAAT(0.783)AS(0.684)PPQAPSPNR 65.374 0.0034403 36802000.0 1964.7 2525.6 2336.3 2109.7 2773.8 2560.5 2598.3 1981.9 3396.4 3763.5 3314.4 True False 2296.29332769677 2654.1422522901985 2667.6224706798153 2626.5765947080326 2365.77769443064 2831.450410477657 3070.3774770600353 2262.8403943141966 2627.1208229363024 2913.322736135732 2491.3430072135357 0.9217090224220387 1.0653459778943675 1.070756801835746 1.0542814004747383 0.9495993476533225 1.1365156874341913 1.2324186064182812 0.9082813517698192 1.0544998482062204 1.169378414654417 1.0 11.28270794965259 -3.6217729059881623 16.261680151576737 1.0355124243043379 0.5381481784517474 0.0 0.09886628251797215 0.0 0.0 0.011123149398924405 0.0 0.00023890602037841908 3.6217729059881623 -0.4973642458525904 QLSLAAT(ph)AS(ph)PPQAPSPNR ddPTM_A549_PD325901_60min_R1 3 QLSLAATASPPQAPSPNR 18 0 Q8NEQ6 Q8NEQ6 C1orf64 Uncharacterized protein C1orf64 2 QLS(0.572)LAAT(0.752)AS(0.676)PPQAPSPNR;QLS(0.5)LAAT(0.783)AS(0.716)PPQAPSPNR;QLS(0.592)LAAT(0.735)AS(0.673)PPQAPSPNR 66.965 0.0029296999999999995 210708000.0 36457.8 33496.3 32375.4 58935.7 42910.1 72067.7 41607.3 41068.4 45879.2 42676.6 49490.4 True False 40158.96901718618 36319.150756275085 34572.589333095704 62576.024336313916 39896.24260780869 71480.80454516975 43190.68856988816 40249.25854446346 43951.05677321568 39981.99219276589 43403.3945454939 0.9252494980569543 0.8367813424870867 0.7965411391235296 1.441731113236407 0.9191963676018671 1.6468943338117508 0.9950993239622585 0.9273297392045134 1.0126179584213797 0.9211720099647547 1.0 15.405520258680918 QLSMT(ph)LR ddPTM_A549_PD325901_60min_R1 1 QLSMTLR 7 0 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 QLS(0.461)MT(0.539)LR 103.87 0.010867 16930000.0 2749.6 2868.8 2992.7 1961.3 3279.5 2247.7 2550.9 3240.1 2792.7 3100.1 2632.3 True False 3028.7373678514623 3110.5638440544744 3195.8026185670446 2082.4450465645164 3049.159233660804 2229.3954764225587 2647.9758954060417 3175.4736636907214 2675.332530875855 2904.359156933625 2308.543787524524 1.3119687762557928 1.3474138376166411 1.3843370161905995 0.9020600162830545 1.3208149874126711 0.9657150487984303 1.147032995308915 1.375531051588073 1.158883164934308 1.2580914308963576 1.0 11.172767381764709 -2.0000099858570883 0.024566155313457575 8.993037262421314e-07 2.8183724285931384 0.00835427572729519 0.16584843655263398 1602.9245757294623 2.945691157346779 115.9564306288168 244.41822591304773 0.009999770069786713 2.0000099858570883 2.8183715292894123 QLSS(ph)GVSEIR ddPTM_A549_MK2206_60min_R1 1 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.226)S(0.604)GVS(0.169)EIR 130.77 1.1871e-06 15346000.0 4249.6 4393.5 3594.1 3077.6 5046.0 3988.2 3946.9 3712.2 5588.2 4678.4 5209.3 True False 4966.828587255151 4617.11038384423 4103.797424076668 3831.6121381587113 4303.7400843957785 4410.228676847096 4664.000640498884 4238.415718135708 4322.481622521684 3621.5461907100876 3915.687040634042 1.268443707506028 1.1791316149455628 1.0480401986906918 0.9785286971091242 1.099102160038536 1.1262975388689327 1.1911065905164047 1.0824194258000273 1.1038884307316277 0.9248814200747958 1.0 11.935049747517908 -14.999999999995381 0.16009341208430652 0.5537696538474944 1.148703525772907 0.39058756500435854 0.07487635806542174 60.431920985521046 0.6238497947365274 8.466314001629561 0.12128180460102611 1.0000000000106345e-15 14.999999999995381 0.5949338719254126 QLSS(ph)SSGNTDTQADEDER ddPTM_A549_MK2206_60min_R1 1 QLSSSSGNTDTQADEDER 18 0 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;A0A3B3ITA2;A0A3B3IS27 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 QLS(0.066)S(0.299)S(0.299)S(0.299)GNT(0.03)DT(0.006)QADEDER 49.463 0.019074 1989900.0 0.0 275.53 270.09 196.62 400.87 304.25 193.66 249.74 380.23 333.72 292.43 True False 0.0 289.5533001162174 308.3928233128924 244.79190882660723 341.902554029278 336.4455330551954 228.8455152243567 285.14140979667326 294.108512102541 258.3324202213943 219.81156034258217 0.0 1.317279672028809 1.4029872807065014 1.1136443799638769 1.5554348165147174 1.5306089112457784 1.0410986340649913 1.2972084332246803 1.3380029314389337 1.1752449225999593 1.0 7.7801234523600495 -5.259008383120258 24.999999999990827 1.23124722019977 2.4926494717190528e-05 0.8050591834291646 0.179382125289999 81.89264443797323 842118.9122937432 0.027957021429823294 0.26057362258088845 5.5079706435092124e-06 5.259008383120258 -1.2312222937050528 QLSS(ph)SSSYSGDISR ddPTM_A549_MK2206_60min_R1 1 QLSSSSSYSGDISR 14 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 QLS(0.031)S(0.319)S(0.319)S(0.319)S(0.011)YSGDISR 233.43 7.1871e-48 128010000.0 14709.0 18158.0 16624.0 15725.0 24420.0 18352.0 18802.0 17335.0 26531.0 27564.0 26201.0 True False 17191.51959947666 19082.16464091124 18981.53317321458 19577.62570592207 20827.850348978387 20293.996458928315 22218.08002296993 19792.289336210986 20521.7708613011 21337.273255970606 19694.568589187147 0.8729066352291296 0.9689049320627346 0.9637953269834992 0.9940621759377211 1.057542857801589 1.0304362020943312 1.1281323539713513 1.0049618120133634 1.0420015431344918 1.0834090200729427 1.0 14.265510194518312 -5.2370075952546875 0.8798225778640101 1.029519797350871 0.7917643396932673 0.6239625504319819 0.03962269257037884 1.1980829660836063 0.659207718260688 0.005857670390034209 0.27666250299618106 5.794185630491314e-06 5.2370075952546875 -0.23775545765760364 QLSSGVSEIR ddPTM_A549_PD325901_60min_R1 2 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 ; 163.66 1.4500999999999999e-08 26300000.0 7803.0 9776.6 9501.099999999999 8987.400000000001 11778.7 7785.5 8874.2 8398.1 8836.8 8491.400000000001 9913.8 False True 8595.15481573501 10600.508392980684 10145.901780755625 9542.531286133666 10951.404746309052 7722.097469274303 9211.912537148575 8230.593307317997 8465.420026799778 7955.251554848614 8694.46544875608 0.9885777183650458 1.2192248569458979 1.1669379607698829 1.0975408830336912 1.2595834454521724 0.888162419505515 1.0595145373159802 0.9466474225273447 0.9736561812446939 0.9149787990688691 1.0 13.08588161545612 -7.264655941647534 24.999983881935492 0.9836447164326365 1.148849904511889 0.5684368153216517 0.0781523633585343 150.88784773337656 1172742.0962213075 0.009994201596652885 0.016384565400154028 5.436808777659016e-08 7.264655941647534 0.16520518807925244 QLSSS(ph)S(ph)SYSGDISR ddPTM_A549_MK2206_60min_R1 1 QLSSSSSYSGDISR 14 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 2 QLS(0.032)S(0.219)S(0.577)S(0.729)S(0.371)Y(0.031)S(0.041)GDISR 82.48899999999999 0.00043254 7860700.0 3123.8 3047.2 3279.1 2835.8 4502.2 3303.3 2744.3 3379.7 4961.2 4205.9 4898.1 True False 3651.021070422547 3202.2894643564678 3744.1256874571654 3530.5711273039005 3839.932344028278 3652.853013446925 3242.9037872054223 3858.782824897163 3837.4961214084315 3255.7842688755895 3681.766589317106 0.9916492482212834 0.8697698201858115 1.0169372763392983 0.9589339904240781 1.0429592020227736 0.9921468199656992 0.8808010254139755 1.0480791574603565 1.042297502656248 0.8842994768659336 1.0 11.84618245260234 -6.308406669633127 0.4214358278960309 1.0184350666231492 0.9229508186784614 0.0 0.06826294719344138 3.259920330931244 0.672214509746003 0.014248137924034104 0.13477256120701045 4.915790097244824e-07 6.308406669633127 -0.0954842479446878 QLSSS(ph)SGNTDTQADEDER ddPTM_A549_MK2206_60min_R1 1 QLSSSSGNTDTQADEDER 18 0 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;A0A3B3ITA2;A0A3B3IS27 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 QLS(0.027)S(0.213)S(0.547)S(0.213)GNTDTQADEDER 99.45100000000001 4.7059e-07 1864700.0 343.94 273.08 238.89 145.44 364.13 291.55 233.41 275.91 246.0 346.71 231.6 True False 401.9886634743358 286.9786055810136 272.76819416200857 181.0728065290497 310.566959360094 322.4016274847732 275.81757569202273 315.02108743893706 190.28139278127742 268.3879701994471 174.08732816517465 2.309120759742648 1.6484749843982172 1.5668469212371687 1.040126288555863 1.7839722318296884 1.8519534470589234 1.584363311213129 1.8095578280117204 1.0930226501077538 1.5416858482933329 1.0 7.443667382662619 -8.796253065688603 8.12005773766532 1.0430048146850375 1.6752365188696203 0.2735803260522721 0.3219082227207107 0.13551986491016482 27.320001763289607 0.049169024624870356 0.05252684577803761 1.5986262292109113e-09 8.796253065688603 0.6322317041845829 QLSSS(ph)SGNTDTQADEDER ddPTM_A549_PD325901_60min_R1 1 QLSSSSGNTDTQADEDER 18 0 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;A0A3B3ITA2;A0A3B3IS27 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 QLS(0.053)S(0.044)S(0.43)S(0.43)GNT(0.036)DT(0.007)QADEDER 52.887 0.013934 1344400.0 295.4 169.8 125.11 141.28 170.92 0.0 237.05 307.2 257.03 145.99 292.67 True False 325.3887905380138 184.1096419131519 133.60071694754674 150.00654472983993 158.9151688419896 0.0 246.07106746873723 301.0726550062622 246.22792294590212 136.77216648519075 256.6734453879886 1.2677150534452633 0.7172913490713894 0.5205085268777819 0.584425648329493 0.6191336567823478 0.0 0.9586931250202967 1.1729793650884284 0.9593042341162447 0.5328644974490657 1.0 8.003790236803292 -7.9618770106504115 24.99969551167906 0.9980502142552515 0.6053030239956693 0.17641135036469802 0.31247445019873754 146.91099428591517 96338.71116249108 0.042351683380924016 0.05851720200874077 1.0917494689655051e-08 7.9618770106504115 -0.39274719025958227 QLSSSS(ph)S(ph)YSGDISR ddPTM_A549_MK2206_60min_R1 1 QLSSSSSYSGDISR 14 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 2 QLS(0.002)S(0.017)S(0.145)S(0.847)S(0.843)Y(0.056)S(0.09)GDISR 83.775 0.00033162 7470500.0 3088.8 3490.8 2792.0 2812.5 4522.6 3130.3 3719.8 3170.6 4493.7 4400.3 4512.8 True False 3610.1139260903888 3668.466809587672 3187.9475829893604 3501.562626257921 3857.331531051991 3461.5462682750276 4395.639510128897 3620.0422595552695 3475.8841249643324 3406.2691738589247 3392.1472130561347 1.064256265823404 1.0814586098940526 0.9398022499492875 1.0322555025856939 1.137135651485111 1.0204587392173845 1.2958280505074755 1.0671831238992173 1.0246855182422214 1.00416313323562 1.0 11.727983066278247 -8.784215155871724 4.219006783964165 1.0109982544216665 1.081017493483251 0.12645120854175151 0.08304180368475925 0.3326837416830398 13.125460834086663 0.014696106459121986 0.01589818002678268 1.6435572790466803e-09 8.784215155871724 0.07001923906158458 QLSSSS(ph)SYS(ph)GDISR ddPTM_A549_PD325901_60min_R1 1 QLSSSSSYSGDISR 14 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 2 QLS(0.002)S(0.015)S(0.102)S(0.799)S(0.126)Y(0.11)S(0.845)GDISR 81.44800000000001 0.00051429 10819000.0 4051.2 5015.8 3923.6 4060.4 5163.3 4458.4 3831.0 4179.3 4079.8 4819.4 4931.1 True False 4462.474841664184 5438.499068951632 4189.879090523494 4311.20168616253 4800.647620418004 4422.092268577806 3976.790801403637 4095.9405829025745 3908.3401938866737 4515.10226151605 4324.605960818365 1.0318801023942836 1.2575710060581982 0.968846440227036 0.9969004633538222 1.1100774646089504 1.022542240528428 0.9195729824714691 0.9471245750508749 0.9037448103473179 1.0440494006676244 1.0 12.078352971337205 -7.561660762892128 4.644853570804029 0.9505676045323511 1.0730367878296005 0.30189516824445595 0.07874827907491483 0.1665505601204538 8.28209573348235 0.011638416250321772 0.0176769723828706 2.743716513277831e-08 7.561660762892128 0.12246918329724943 QLSSSS(ph)SYSGDISR ddPTM_A549_MK2206_60min_R1 3 QLSSSSSYSGDISR 14 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 QLS(0.013)S(0.132)S(0.132)S(0.719)S(0.003)YSGDISR;QLSSS(0.016)S(0.983)S(0.001)YSGDISR;QLSS(0.001)S(0.209)S(0.731)S(0.058)YSGDISR 233.48 6.8954e-48 156445000.0 11090.2 12543.900000000001 11469.8 10911.999999999998 17941.7 12534.300000000001 13059.800000000001 14142.4 19182.3 21213.899999999998 20720.3 True False 12961.954630642202 13182.330930671144 13096.390110090018 13585.4404898583 15302.499697226282 13860.671306405035 15432.596611210654 16147.128509283544 14837.5396778386 16421.665256306573 15574.877658812034 0.8322347638672154 0.8463842361684797 0.8408663231251948 0.8722662731268299 0.982511711003287 0.8899377324201884 0.9908647084928542 1.0367419162453413 0.9526585057599949 1.0543688121373742 1.0 13.926933210425155 -6.7171854974192815 0.9531528410254402 0.98160043349718 0.8276495783555671 0.7284218316929851 0.040894936016772306 0.22272086133567026 0.3773883631294646 0.00577268800152387 0.02072891966305594 1.9178494069759298e-07 6.7171854974192815 -0.15395085514161289 QLSSSS(ph)SYSGDISR ddPTM_A549_PD325901_60min_R1 1 QLSSSSSYSGDISR 14 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 QLSSS(0.045)S(0.844)S(0.11)YS(0.001)GDISR 149.14 1.1969e-34 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QLSSSSSYS(ph)GDISR ddPTM_A549_PD325901_60min_R1 2 QLSSSSSYSGDISR 14 0 I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 I3L4X2 ABCC1 Multidrug resistance-associated protein 1 1 QLSSSSSYS(1)GDISR;QLSSSSSYS(1)GDISR 236.67 2.605e-57 288830000.0 30072.5 29337.9 29556.1 26985.9 33956.9 30498.1 32127.8 31961.6 37323.5 37315.5 35041.5 True False 33125.43806179557 31810.30779436899 31561.954681267558 28652.757753574384 31571.884488945438 30249.73358521281 33350.441010006725 31324.10081460987 35754.923090967495 34959.392961696925 30731.617646370316 1.0778943836595594 1.0351003373922973 1.0270189823540028 0.9323543616636965 1.0273420960863207 0.9843195998758489 1.085215929528061 1.0192792704587592 1.163457241411777 1.1375708680218448 1.0 14.907436088848465 -7.771431925411423 24.993534619064807 1.07443171289322 1.012450229132119 0.2670728551107169 0.05481119229826966 285.69229369223274 714577.8302725842 0.010509538986137459 0.014615565835293437 1.692653542910288e-08 7.771431925411423 -0.06198148376110102 QLSST(ph)SPLAPYPTSQMVSSDR ddPTM_A549_MK2206_60min_R1 1 QLSSTSPLAPYPTSQMVSSDR 21 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 QLS(0.018)S(0.08)T(0.544)S(0.359)PLAPYPTSQMVSSDR 94.281 1.7244e-06 2215200.0 597.68 598.49 1032.7 666.63 942.35 486.99 529.47 901.96 1254.3 1305.4 844.26 True False 698.5537721269438 628.9505846425252 1179.1523885935203 829.9543799261575 803.7315633234967 538.5229585622005 625.6678454293099 1029.8155921366522 970.2030527055134 1010.509233360326 634.6069416093709 1.1007660432383595 0.9910868340763794 1.8580830294783344 1.307824301167244 1.266502949503237 0.8485929214648988 0.9859139640713803 1.6227613103711525 1.5288251500134347 1.592338764523537 1.0 9.309719491948401 -11.123696101954321 1.5104042947203404 1.0015153986561771 1.3113732103602014 0.0 0.3364538328926114 0.7028583685608826 2.892925727226694 0.21394856348735616 0.04718096314527557 7.521490270320349e-12 11.123696101954321 0.30985781170402427 QLSSTS(ph)PLAPYPTSQMVSSDR ddPTM_A549_MK2206_60min_R1 1 QLSSTSPLAPYPTSQMVSSDR 21 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 QLS(0.006)S(0.026)T(0.124)S(0.844)PLAPYPTSQMVSSDR 73.809 0.00031006 2145900.0 695.37 762.09 929.32 536.6 798.5 961.69 869.72 790.54 1063.5 1074.8 811.35 True False 812.7314558357534 800.8771258504266 1061.111550080111 668.067024088889 681.0417077665539 1063.4553974818427 1027.7368661619719 902.6014659272126 822.6189480605226 832.0019335189813 609.8694028791641 1.3326319569384648 1.3131944676508187 1.7398996327257188 1.0954263665876278 1.116700894570852 1.7437428283191794 1.6851753200112607 1.4799913910520426 1.3488444315733468 1.3642296688293267 1.0 9.252356527548036 -10.09141978748787 0.8201334497417805 1.0240275051213181 1.434076132536003 0.08115783961681877 0.2361216639903618 0.4895437726987043 0.6556603663440822 0.103930599891021 0.04463777441014602 8.10177564527134e-11 10.09141978748787 0.41004862741468484 QLSSTS(ph)PLAPYPTSQMVSSDR ddPTM_A549_PD325901_60min_R1 1 QLSSTSPLAPYPTSQMVSSDR 21 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 QLS(0.002)S(0.012)T(0.099)S(0.887)PLAPYPTSQMVSSDR 114.4 1.6122e-14 2931100.0 1061.1 854.56 742.13 1204.1 1354.1 1169.1 986.07 1216.3 1152.6 1146.2 905.16 True False 1168.822090859466 926.5767702785803 792.4954045902234 1278.474522290489 1258.9926873914003 1159.5792372138694 1023.595433448208 1192.0399423311092 1104.160230274469 1073.8287363882848 793.8310582819959 1.4723814074357626 1.16722161549571 0.9983174585097955 1.610512096940822 1.5859705591717517 1.460738056436622 1.2894373718048608 1.5016292571254575 1.390925964353279 1.3527169605989695 1.0 9.63268819800925 -10.566152979301416 0.8156543294841077 0.994395123472163 1.383403236625305 0.04375317388624678 0.19968457159413885 0.5504985952441219 0.6423269627708895 0.13061185929957309 0.03444931702381902 2.715482577428737e-11 10.566152979301416 0.3890081131531421 QLST(ph)EQAVLQESLEK ddPTM_A549_MK2206_60min_R1 1 QLSTEQAVLQESLEK 15 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 QLS(0.341)T(0.659)EQAVLQESLEK 165.45 3.5297e-20 6942500.0 1543.7 1735.5 1605.5 1256.4 1984.8 1446.1 1367.2 1421.0 2528.2 1984.3 1656.5 True False 1804.238820158552 1823.8295370801548 1833.1840417225708 1564.2180564019384 1692.8385492486607 1599.125342156509 1615.602542676549 1622.4311016299869 1955.5667367057958 1536.0452518437987 1245.1453329257852 1.449018658664555 1.4647523376203837 1.4722651189761433 1.2562533987309021 1.3595509732754703 1.2842881066734257 1.2975212611368672 1.3030054072625186 1.5705529989103322 1.2336272812704283 1.0 10.28209842764176 -10.976894215286178 1.2258418829299955 0.9983585728778598 1.3958333591436367 0.4036986770899118 0.11369695590817777 0.234676878257218 0.62299173535111 0.07858701066423125 0.01779030337573079 1.0546437534455486e-11 10.976894215286178 0.3974747862657769 QLST(ph)EQAVLQESLEK ddPTM_A549_PD325901_60min_R1 2 QLSTEQAVLQESLEK 15 0 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 QLS(0.311)T(0.689)EQAVLQESLEK;QLS(0.275)T(0.725)EQAVLQESLEK 274.52 8.169999999999999e-92 32726000.0 5725.3 7024.7 6721.4 5282.200000000001 8459.0 5940.8 6821.6 6485.5 6472.8 5975.6 5969.1 True False 6306.528241256901 7616.696122186794 7177.554623061631 5608.469497253402 7864.869021965771 5892.420094465963 7081.1997209227475 6356.141614723674 6200.770725768337 5598.299596197726 5234.938541242501 1.204699576045082 1.4549733606574469 1.3710867026450428 1.0713534558367985 1.5023803928171928 1.1255948943896121 1.3526805835703357 1.214176931524216 1.1844973301819506 1.0694107585203823 1.0 12.35395688451824 -9.807733064148186 0.3227723538836333 0.9408478148141425 1.3357400242018997 0.38487718019709816 0.1245571830811598 1.1952291372927673 0.2586903067899581 0.1759183302662535 0.06208711177520238 1.5569222882020839e-10 9.807733064148186 0.39489220938775726 QLSVS(ph)DR ddPTM_A549_MK2206_60min_R1 1 QLSVSDR 7 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 QLS(0.476)VS(0.524)DR 105.94 0.009670100000000001 73502000.0 4660.9 4711.0 4707.5 4898.6 8494.3 6788.1 6895.5 7127.1 9947.6 9383.4 10158.0 True False 5447.545971935607 4950.769777692082 5375.094286146993 6098.7572199065135 7244.799722331164 7506.412236423895 8148.323093202273 8137.3882508283505 7694.484483052992 7263.683422945673 7635.488253462196 0.7134509007286469 0.648389417068022 0.7039620922355212 0.7987383409490709 0.9488325411339766 0.98309525039479 1.0671646426156887 1.0657325348039892 1.0077265824571264 0.9513056901963102 1.0 12.898504698177543 -6.663006714138913 1.6559035244115974 1.0133617433949351 0.6780427628431747 0.9460377147867063 0.034005262728588066 0.05091496997967135 0.2800753486175233 0.004641355084537314 0.012249201313664774 2.1726675894322043e-07 6.663006714138913 -0.33531898055176046 QLT(ph)PPEGSSK ddPTM_A549_PD325901_60min_R1 1 QLTPPEGSSK 10 0 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QLT(0.987)PPEGS(0.007)S(0.006)K 66.393 0.0053992 12068000.0 6192.2 6134.1 6149.6 6601.8 6587.7 6060.5 6684.9 6237.6 6814.6 6808.9 7479.2 True False 6820.827585543287 6651.042134625826 6566.948836548907 7009.578192224358 6125.002678331234 6011.145297352373 6939.2975276176385 6113.186174697462 6528.206060409855 6378.984891985857 6559.3058145551095 1.039870342743871 1.0139856751101852 1.0011652181206185 1.0686463461834776 0.9337882470336791 0.9164301021022122 1.0579316964028918 0.9319867601129822 0.9952586820885461 0.9725091453779879 1.0 12.679327424064551 -6.750297223324604 24.999971097113768 0.987334906230735 1.0275823862147522 0.270835667057018 0.04167519790247852 295.35559977217207 662692.4419821551 0.005738976245468669 0.011857768038633264 1.7770628039850306e-07 6.750297223324604 0.04024747998401712 QLT(ph)QPETHFGR ddPTM_A549_MK2206_60min_R1 2 QLTQPETHFGR 11 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 QLT(1)QPETHFGR;QLT(1)QPETHFGR 141.58 2.7781e-11 91282000.0 1020.5999999999999 1851.1599999999999 1462.05 977.9000000000001 1567.69 1578.0700000000002 621.96 1351.98 1869.0500000000002 1766.95 1707.25 True False 1192.85232872567 1945.3761370563539 1669.3906746810856 1217.4855438995999 1337.084877706386 1745.060319961912 734.9620812193587 1543.6273052651027 1445.713159259539 1367.7947677999298 1283.2927072970404 0.9295247467260512 1.515925498520006 1.300865083381695 0.9487200675081774 1.0419173039038352 1.359830309982419 0.5727158558918226 1.2028645502992041 1.1265653977763186 1.0658478459531446 1.0 10.325634558131204 -6.248858266414254 24.460574969643716 1.0506008827546192 1.275487176443263 0.14484209790265035 0.22245417095387124 744.2734991409005 1447033.9675906473 0.02805045525261244 0.07363625208779943 5.638216310464004e-07 6.248858266414254 0.22488629368864377 QLT(ph)QPETHFGR ddPTM_A549_PD325901_60min_R1 2 QLTQPETHFGR 11 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;H0Y5J4;Q9UJU6-5;Q9UJU6 B4DDD6;H0Y5J4 DBNL Drebrin-like protein 1 QLT(1)QPETHFGR;QLT(1)QPETHFGR 114.7 1.9861e-05 180314000.0 2050.45 3103.9 2681.8999999999996 2987.4 4325.5 2587.1 2594.4 2463.8 2290.61 3326.7 2985.3999999999996 True False 2258.610174538489 3365.4765461379975 2863.9098615748167 3171.9249131223355 4021.6918021649094 2566.03151535027 2693.131311710154 2414.65757618629 2194.3436275108475 3116.6515942618257 2618.214726009844 0.8626527656807614 1.2854089134495776 1.0938407125757068 1.2114838716671437 1.5360435346316925 0.9800691631052351 1.028613614061549 0.922253454691329 0.8381068235969417 1.1903727999466258 1.0 11.354367705645064 -7.495943204760732 24.772410987668753 0.9319447613090228 1.2037568013301545 0.21867816230169368 0.17457368113672317 491.4808175968435 452011.5572080142 0.023030059690882187 0.036748260218919214 3.191955258537073e-08 7.495943204760732 0.2718120400211317 QLTPPEGS(ph)SKSEQDQAENEGEDSAVLMER ddPTM_A549_MK2206_60min_R1 1 QLTPPEGSSKSEQDQAENEGEDSAVLMER 29 1 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QLT(0.009)PPEGS(0.33)S(0.33)KS(0.33)EQDQAENEGEDSAVLMER 52.345 0.0020851999999999997 3511900.0 775.54 1101.4 762.96 784.37 1061.5 967.56 790.93 944.04 1109.5 1436.8 1351.0 True False 906.4321918674372 1157.4565555402378 871.1592005435389 976.540685211707 905.3547561605474 1069.9465569856518 934.6317430362514 1077.860561001247 858.200021507428 1112.2258820990621 1015.5094142968528 0.892588664473444 1.1397792469916888 0.8578543815339583 0.9616264226244243 0.8915276839530065 1.053605748920104 0.9203575366983655 1.0613988859449095 0.8450931221564822 1.0952393610936404 1.0 9.98798789888643 -8.767347290096783 24.999713639069316 0.9268495426390106 0.972032222653979 0.0 0.10080464815600602 369.2122036423995 1562341.0155493293 0.015535536844908018 0.016752284577303864 1.7086484222946963e-09 8.767347290096783 0.04518268001496839 QLVAGNS(ph)PK ddPTM_A549_MK2206_60min_R1 2 QLVAGNSPK 9 0 Q96EU6-2;Q96EU6 Q96EU6-2 RRP36 Ribosomal RNA processing protein 36 homolog 1 QLVAGNS(1)PK;QLVAGNS(1)PK 122.7 0.00010997 194222000.0 8769.1 9332.6 9491.400000000001 8278.4 12087.7 8879.7 8769.2 9697.0 12804.9 11310.8 12534.2 True False 10249.10969608885 9807.589477242444 10837.42324111218 10306.608371631499 10309.615342479363 9819.343960132182 10362.450129636634 11071.579445817024 9904.610595223498 8755.682424308234 9421.612213678465 1.0878297114806963 1.0409672203451135 1.1502726916926398 1.0939325603603363 1.094251717079979 1.0422148287823059 1.0998595457571734 1.1751257847083865 1.0512649396505416 0.9293189133380566 1.0 13.201758237670228 -9.272941517238996 1.951773114721759 1.016461286980061 1.0956343643710857 0.47944117634207606 0.046920241381702706 0.20138913127880478 1.5807604351376 0.008277859126588816 0.007454636197688961 5.334067200185073e-10 9.272941517238996 0.07917307739102464 QLVAGNS(ph)PK ddPTM_A549_PD325901_60min_R1 1 QLVAGNSPK 9 0 Q96EU6-2;Q96EU6 Q96EU6-2 RRP36 Ribosomal RNA processing protein 36 homolog 1 QLVAGNS(1)PK 58.676 0.010892 3483200.0 2598.7 3326.5 3161.3 3573.9 3648.2 3063.3 3535.7 3490.6 3484.2 3685.8 3518.0 True False 2862.5181109381706 3606.8358293527635 3375.844828441206 3794.651686084196 3391.9630176067553 3038.353500433878 3670.2529983092777 3420.9772446772745 3337.77119063188 3453.077958977435 3085.308302439414 0.9277899744005831 1.169035790199962 1.0941677451722014 1.2299100492109447 1.099391919739393 0.9847811636949179 1.1895903548463453 1.1087959157833471 1.0818274426555217 1.1192002939373165 1.0 11.591198943948235 -10.09587684517299 0.6813000519711252 1.001310673852955 1.1056349698148342 0.0 0.08851319020351547 0.8791099886083146 0.7950221632780604 0.0457255230947782 0.01683818923424462 8.01905431054965e-11 10.09587684517299 0.10432429596187931 QLVAGNS(ph)PKK ddPTM_A549_MK2206_60min_R1 2 QLVAGNSPKK 10 1 Q96EU6-2;Q96EU6 Q96EU6-2 RRP36 Ribosomal RNA processing protein 36 homolog 1 QLVAGNS(1)PKK;QLVAGNS(1)PKK 122.7 2.7645e-05 7612800.0 2979.3900000000003 3166.8999999999996 3701.2 2671.0 4085.4 3278.3 2993.56 3161.5 4637.6 5090.5 5096.4 True False 3482.238192908069 3328.0816830764315 4226.085814527297 3325.3951199057483 3484.4430718966564 3625.2075300405786 3537.4511027317235 3609.652306687686 3587.1910047254178 3940.552514494205 3830.8232265155298 0.909005189486509 0.8687640975027746 1.103179542526501 0.8680627957167544 0.9095807521941083 0.9463259763458267 0.923417994922555 0.9422654331066542 0.9364021236731102 1.028643787898948 1.0 11.903438738741942 -10.59239914433084 0.6264892605269493 1.0064635933099253 0.93364338910402 0.20105393912463188 0.06009488300594133 1.5165291935571166 0.9258921619280186 0.06016668327999608 0.012001898717555774 2.556235463533201e-11 10.59239914433084 -0.07282020420590529 QLVAGNS(ph)PKK ddPTM_A549_PD325901_60min_R1 4 QLVAGNSPKK 10 1 Q96EU6-2;Q96EU6 Q96EU6-2 RRP36 Ribosomal RNA processing protein 36 homolog 1 QLVAGNS(1)PKK;QLVAGNS(1)PKK;QLVAGNS(1)PKK;QLVAGNS(1)PKK 109.24 0.00017583 648691600.0 26333.5 28521.199999999997 29912.700000000004 26906.8 32584.8 30441.899999999998 33247.8 33944.7 30140.800000000003 28987.699999999997 28742.3 True False 29006.857534301897 30924.78161916009 31942.755701677557 28568.77192622352 30296.15605945743 30193.991259379778 34513.06322289426 33267.646329398005 28874.08699345541 27157.41167492817 25207.179312451506 1.1507379375832614 1.2268243596729713 1.2672086513820648 1.1333585393313523 1.2018860057258425 1.1978330016665115 1.3691759317888441 1.3197687022825635 1.1454707659096381 1.077368131447905 1.0 14.62154706896318 -9.616878015736944 1.0751788567787486 1.0281144555584854 1.2298574859215996 0.5074611455763589 0.07081065757235483 0.23013654455536758 0.5509836268754887 0.02142448686211708 0.014862830334980284 2.4161393823110846e-10 9.616878015736944 0.20174303036311425 QLVNNKDTTS(ph)FEDISPQGVSDDSSTGSR ddPTM_A549_MK2206_60min_R1 2 QLVNNKDTTSFEDISPQGVSDDSSTGSR 28 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802 Q3V6T2 CCDC88A Girdin 1 QLVNNKDT(0.061)T(0.242)S(0.697)FEDISPQGVSDDSSTGSR;QLVNNKDT(0.064)T(0.244)S(0.691)FEDISPQGVSDDSSTGSR 135.15 6.8787999999999995e-28 24534000.0 2333.6000000000004 2315.6000000000004 2650.9 2138.33 4920.1 2945.6 3316.1 3560.6000000000004 5663.200000000001 5123.0 5774.1 True False 2727.454628957696 2433.4541492727235 3026.8374812845605 2662.220945993283 4196.359807617057 3257.3014368689664 3918.5924457063375 4065.325953880177 4380.494242272074 3965.7107419219788 4340.231612947041 0.6284122305412497 0.5606737995303424 0.6973907733991461 0.6133822301214982 0.9668515834729166 0.7504902335516701 0.9028533025788437 0.9366610624541759 1.0092766084659925 0.9137094734972541 1.0 12.083556317639262 -6.94440748373582 0.534757967863166 1.0103981352812264 0.5464901349282266 0.7460724145649182 0.08116967516762948 0.3193255537415721 0.1520102827676533 0.015465933904070563 0.06784600477280009 1.1365603894426288e-07 6.94440748373582 -0.4639080003529997 QLVNNKDTTS(ph)FEDISPQGVSDDSSTGSR ddPTM_A549_PD325901_60min_R1 2 QLVNNKDTTSFEDISPQGVSDDSSTGSR 28 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802 Q3V6T2 CCDC88A Girdin 1 QLVNNKDT(0.068)T(0.403)S(0.529)FEDISPQGVSDDSSTGSR;QLVNNKDT(0.035)T(0.166)S(0.798)FEDISPQGVSDDSSTGSR 138.34 2.8163e-28 61321000.0 3217.9 4294.299999999999 3961.0 3549.0 4346.2 3940.2 4272.3 4884.0 4319.3 4582.6 4738.6 True False 3544.578839107226 4656.195731847161 4229.817279427962 3768.2136696361986 4040.9379055760323 3908.1123175691473 4434.884714392263 4786.584788576121 4137.774841770356 4293.25385392859 4155.782240460324 0.8529269903984679 1.1204137903364755 1.0178149466655975 0.9067399232205209 0.9723651702040166 0.9404035369130066 1.067160033366191 1.151789124553823 0.9956669051340926 1.0330795998235554 1.0 12.020904344862169 -7.747376268713051 24.9981786006531 1.0166054796312938 0.9749694133454139 0.1575172483907985 0.07719924461545292 576.8709596154366 1025426.7969023449 0.011913812528244257 0.01762617255131141 1.789055161572722e-08 7.747376268713051 -0.0416360662858799 QLVST(ph)LEKK ddPTM_A549_PD325901_60min_R1 1 QLVSTLEKK 9 1 Q7Z406;Q7Z406-6;Q7Z406-2;A0A0C4DFM8;A1L2Z2 Q7Z406 MYH14 Myosin-14 1 QLVS(0.414)T(0.586)LEKK 47.428999999999995 0.021263 3760900.0 2322.4 2164.1 2366.0 1745.5 2417.5 2358.5 2344.5 2651.1 2966.2 2662.6 2793.2 True False 2558.1683383394816 2346.47630190961 2526.570987913801 1853.3155706818766 2247.703139922243 2339.293157958183 2433.7212304596255 2598.2217307522847 2841.540929238355 2494.4829815978405 2449.6541075536584 1.044297776755997 0.9578806635084139 1.0313990779853224 0.7565621468627202 0.9175593946064926 0.9549483540328528 0.9934958666021857 1.0606484085816479 1.1599763903304918 1.0183000832264235 1.0 11.258362338973152 -8.067116743042154 2.39514376525745 1.0767631139053455 0.938636309854598 0.3074824155335204 0.07992093427005352 0.26129644990929335 2.968895334494818 0.014812213176887166 0.020128395191643556 8.568074951730316e-09 8.067116743042154 -0.1381268040507475 QLVTS(ph)PSPMSSSDGK ddPTM_A549_MK2206_60min_R1 1 QLVTSPSPMSSSDGK 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 QLVT(0.016)S(0.814)PS(0.16)PMS(0.003)S(0.004)S(0.004)DGK 88.507 3.685e-05 4407600.0 1753.4 2613.2 2131.9 2005.3 2746.0 2752.1 1901.1 2201.8 3399.1 3795.6 3399.2 True False 2049.3310534857837 2746.2007181203476 2434.235477140048 2496.5985900213373 2342.067037604203 3043.325395303872 2246.505261763011 2513.9118927297013 2629.209277247318 2938.171323841313 2555.084826852598 0.802059889342378 1.0747982568951222 0.9527024118954929 0.9771098649185338 0.9166298562733848 1.1910858548883083 0.8792292287729244 0.9838858836739232 1.0290105634128899 1.1499310288890128 1.0 11.319155472986669 -5.248867175889131 24.535888021115177 1.0054555825027192 0.8020597223973948 0.3131511449123505 0.08974686401565984 1186.6591027601908 2315829.519843091 0.009488947256518134 0.2278551996917365 5.6381006446349305e-06 5.248867175889131 -0.2033958601053244 QLVTS(ph)PSPMSSSDGK ddPTM_A549_PD325901_60min_R1 2 QLVTSPSPMSSSDGK 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 QLVT(0.002)S(0.996)PS(0.001)PMSSSDGK;QLVT(0.011)S(0.978)PS(0.011)PMSSSDGK 147.35 1.0086e-13 9193700.0 3939.2 4479.5 4932.1 4691.1 5063.4 4716.299999999999 3933.3 5438.6 4866.200000000001 5605.3 6078.200000000001 True False 4339.104684114226 4857.00318580662 5266.821965126649 4980.858592738904 4707.764251781713 4677.892016484283 4082.983883884345 5330.122856500836 4661.690536666338 5251.380401393516 5330.619932884381 0.8139962591117147 0.9111516572104422 0.9880317920690302 0.9343863669612209 0.8831551134868392 0.8775512183163827 0.7659491645045974 0.9999067507363489 0.8745118945563076 0.9851350251024201 1.0 12.380087607907258 -10.85011253805999 0.8368875107221838 1.007728990673019 0.8952851270399484 0.2564171489239412 0.06445746156796663 0.8226925097101205 0.9004557257032526 0.06271358959666067 0.011621026051827896 1.4121715633651999e-11 10.85011253805999 -0.11244386363307046 QLVYVEQAGS(ph)SPK ddPTM_A549_MK2206_60min_R1 2 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.5)S(0.5)PK;QLVYVEQAGS(0.5)S(0.5)PK 216.39 1.0463999999999999e-37 16802200.0 4949.99 5950.68 5564.25 5408.54 10093.6 7667.57 6825.7300000000005 7465.94 10336.2 8623.800000000001 9180.7 True False 5785.4272963636895 6253.54419459069 6353.34431900019 6733.63254279859 8608.844810911072 8478.947168078957 8065.876787319782 8524.259858482328 7995.067203519678 6675.677590510785 6900.8788155700295 0.8383609466247088 0.9061953356551055 0.920657279862027 0.9757644964878833 1.2474997809681085 1.2286764330578346 1.1688187842280666 1.2352426533341758 1.1585578325880608 0.9673662976734012 1.0 12.752564383093645 -6.55906123209037 6.289186421423585 1.1179743761187197 0.8988529143490631 0.6132552340006927 0.08940154313695743 0.11563345058689764 12.844923869791192 0.014630522445158693 0.031019730817437523 2.760188663992488e-07 6.55906123209037 -0.21912146176965663 QLVYVEQAGS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.5)S(0.5)PK 222.75 5.3024999999999994e-46 7415200.0 4360.1 3836.4 4238.4 4248.8 5657.8 4703.6 4669.8 4575.5 4986.6 4264.1 5216.7 True False 4802.734142264026 4159.706891846973 4526.043311569675 4511.238726275082 5260.4156463503905 4665.295441073612 4847.511794412613 4484.238063089686 4777.030543368618 3994.8639982841423 4575.078971385927 1.0497598341584768 0.9092098557999043 0.989282007999657 0.9860460889287107 1.149797780377298 1.0197191065448115 1.0595471301655277 0.9801444064978134 1.0441416581540481 0.8731792441768453 1.0 12.159580930931673 -6.5511857054704326 24.99999321988265 1.0299523941881792 0.9774409069491166 0.03542998698669064 0.069756940186685 258.8656306965622 228622.90254034943 0.007050234075942083 0.014676443881944022 2.810698711191209e-07 6.5511857054704326 -0.052511487239062626 QLVYVEQAGS(ph)SPKLR ddPTM_A549_PD325901_60min_R1 2 QLVYVEQAGSSPKLR 15 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.5)S(0.5)PKLR;QLVYVEQAGS(0.5)S(0.5)PKLR 61.648 0.0014347000000000001 6701100.0 3077.6000000000004 3428.4 4041.0 4024.6000000000004 4874.6 5456.200000000001 4885.0 5591.2 4848.6 4767.6 5140.4 True False 3390.0356863906272 3717.3232999708457 4315.2465605070465 4273.190401470229 4532.2249124570735 5411.766516197343 5070.901348174571 5479.679129788456 4644.83020346069 4466.572922356293 4508.163387680378 0.7519771123767832 0.824575992549274 0.9572072237442586 0.9478783340345941 1.005337323141936 1.2004370850857522 1.1248264342042276 1.2155014489410418 1.0303154087435666 0.9907744103867795 1.0 12.1383240881768 -5.800597068678341 1.0821142352993147 1.050545324674454 0.7184001220977472 0.6574000177651002 0.07889502869770819 0.47286898497428004 0.746167517563844 0.01342862379534199 0.14382542127050735 1.5827157761211737e-06 5.800597068678341 -0.3321452025767069 QLVYVEQAGSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.184)S(0.816)PK 224.67 4.4489e-46 14458000.0 5073.1 5349.7 5123.8 5493.9 8232.7 6902.1 6586.9 6377.9 9378.2 7719.4 7516.8 True False 5929.31525461317 5621.976879583814 5850.431886003179 6839.905746630541 7021.680735791749 7632.475640756819 7783.65446778537 7281.986856499571 7254.05267390803 5975.582178643862 5650.17110687386 1.0494045476604612 0.9950100223945881 1.035443312307071 1.210566125742507 1.2427377158984343 1.3508397350075534 1.3775962392211392 1.2888082004526349 1.2838642470637618 1.0575931357855899 1.0 12.46407884268558 -6.237896800071325 7.348399288931022 1.1925423409253102 1.0227433675311801 0.36310683766248586 0.11146273729876652 0.25768841679259274 61.43461445202153 0.02058324945358954 0.0535716759173715 5.782334347367723e-07 6.237896800071325 -0.16979897339413008 QLVYVEQAGSS(ph)PK ddPTM_A549_PD325901_60min_R1 3 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGS(0.06)S(0.94)PK;QLVYVEQAGS(0.108)S(0.892)PK;QLVYVEQAGS(0.009)S(0.991)PK 240.59 1.3013999999999997e-56 38333200.0 12640.5 13336.900000000001 12621.900000000001 11976.400000000001 15256.5 12450.2 14525.900000000001 14592.099999999999 13753.0 13888.0 14984.499999999998 True False 13923.754254555733 14460.847368854618 13478.498035650555 12716.155027622139 14184.936072067716 12348.809699050656 15078.691073377473 14301.049118219005 13175.009237345796 13011.109309859086 13141.501494571741 1.0595253716104747 1.1003953676699614 1.0256436862422467 0.9676333433340706 1.0793999512100636 0.9396802720108873 1.147410064185277 1.0882355508711261 1.0025497651686068 0.9900778320676282 1.0 13.681842501101421 -8.855582933990702 11.256402307951614 1.0011406358319228 1.049453512942333 0.15323718922296825 0.055701227778619876 0.6143023040708144 69.28167178485839 0.009390256631108884 0.009991273608297007 1.3944953357979086e-09 8.855582933990702 0.04831287711041021 QLWDS(ph)PETAPAAR ddPTM_A549_MK2206_60min_R1 1 QLWDSPETAPAAR 13 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 QLWDS(0.5)PET(0.5)APAAR 127.79 5.4040999999999994e-08 3781100.0 2988.0 3172.0 3031.8 2501.1 4730.3 3674.8 3156.8 2989.5 5516.2 4673.2 5046.0 True False 3492.3013504137807 3333.441251292571 3461.7548288349344 3113.8696122786446 4034.4791361905186 4063.6648968651803 3730.3496977189384 3413.2707799597774 4266.789507561311 3617.5208743216444 3792.938937484763 0.9207375620788807 0.8788544467059357 0.9126840389185256 0.8209648675081402 1.0636815415926337 1.0713763031365713 0.9834984847377138 0.8999013261793354 1.1249296595296039 0.9537514138628753 1.0 11.889100430537045 -6.7713265134810845 24.999760088868154 1.0434400654903684 0.885090085602881 0.4363165644119824 0.06615497053686958 117.17211767737422 296271.86643716303 0.010135698476407709 0.019318786215244157 1.6930644335393408e-07 6.7713265134810845 -0.15834997988748734 QLWDSPET(ph)APAAR ddPTM_A549_MK2206_60min_R1 1 QLWDSPETAPAAR 13 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 QLWDS(0.34)PET(0.66)APAAR 126.56 9.7857e-07 3843100.0 3938.6 3466.2 2731.5 2474.0 5094.7 3727.3 3165.8 3461.1 5536.4 5109.4 5377.1 True False 4603.339390475136 3642.6147746627703 3118.867773257675 3080.1301110620816 4345.276378908282 4121.720412018502 3740.9848812210503 3951.7215241742083 4282.41423981408 3955.1829913675856 4041.817669589643 1.1389280187254223 0.901231839840167 0.7716497942803854 0.7620655761482681 1.075079762157962 1.019769012103154 0.9255699259686953 0.9777090030326424 1.0595268242886533 0.9785654165268535 1.0 11.980788526441117 -6.780644281122385 24.99949117824491 1.01901757558519 0.8853218965837862 0.21530445093234396 0.09995642655466669 233.26327978351216 303644.12985225895 0.01443380986270574 0.027307105336528466 1.6571267154794124e-07 6.780644281122385 -0.13369567900140378 QMDAILKAVGIRT(ph)K ddPTM_A549_PD325901_60min_R1 1 QMDAILKAVGIRTK 14 2 A0A075B6H3;Q5TGY1-2;Q5TGY1 A0A075B6H3 TMCO4 Transmembrane and coiled-coil domain-containing protein 4 1 QMDAILKAVGIRT(1)K 43.297 0.020338 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QMGYTEAIEVIQAAS(ph)SPVK ddPTM_A549_PD325901_60min_R1 2 QMGYTEAIEVIQAASSPVK 19 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 QMGYTEAIEVIQAAS(0.546)S(0.454)PVK;QMGYTEAIEVIQAAS(0.5)S(0.5)PVK 50.827 0.0037489000000000003 2185010.0 1289.83 1743.1999999999998 1403.33 1438.9 1569.15 1947.68 1387.1599999999999 1575.0 1948.96 1644.0300000000002 1738.0 True False 1420.7725920773387 1890.1055817609313 1498.568412708822 1527.777585020998 1458.938317273625 1931.8187398312466 1439.9491328830782 1543.5853894364022 1867.0519888909666 1540.2256652280844 1524.2370180897396 0.9321205135523684 1.2400339050482574 0.9831597021484972 1.0023228453903419 0.9571597461279672 1.2674004875254319 0.9447015889219802 1.012693807535859 1.224909227851494 1.0104896068974776 1.0 10.573871543290675 QMGYTEAIEVIQAASS(ph)PVK ddPTM_A549_MK2206_60min_R1 1 QMGYTEAIEVIQAASSPVK 19 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 QMGYTEAIEVIQAAS(0.454)S(0.546)PVK 51.645 0.0034771999999999997 576730.0 421.68 389.55 387.12 330.25 638.76 395.71 318.88 422.71 443.73 532.11 581.03 True False 492.8492749138164 409.37643109742106 442.0194370798137 411.1612648254861 544.7992501602556 437.583769548961 376.816368350423 482.63043699508233 343.225863491204 411.905981433555 436.74421538778705 1.1284620552471734 0.9373368133426426 1.012078515309797 0.9414234930631291 1.2474103398863017 1.0019223017308392 0.8627850239890323 1.105064291616439 0.7858738625455 0.9431286481214683 1.0 8.770644784761934 -8.752423327553858 24.99925745511473 0.8988848761977966 1.0237468250760906 0.18738300575198485 0.11009148411260877 241.84485209315795 670574.7410237567 0.020346427119307533 0.022908785059249134 1.7683843893014594e-09 8.752423327553858 0.12486194887829405 QMGYTEAIEVIQAASS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 QMGYTEAIEVIQAASSPVK 19 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 QMGY(0.001)T(0.001)EAIEVIQAAS(0.154)S(0.844)PVK;QMGYTEAIEVIQAAS(0.211)S(0.789)PVK 66.467 0.00043869 2052190.0 1445.93 1667.26 1488.4299999999998 1894.53 1824.01 2049.08 1846.6000000000001 1951.33 1748.33 1560.02 2288.31 True False 1592.7197491625936 1807.7658514494792 1589.4438104566932 2011.5508153101907 1695.8978300928936 2032.392971850308 1916.8733734982918 1912.4091923612275 1674.853770081349 1461.5200709653204 2006.8623767922513 0.7936367573487431 0.9007921381928511 0.792004388959269 1.0023362033052976 0.8450493913805887 1.0127216471609102 0.955159355053635 0.9529348970196966 0.8345633409892403 0.728261233987255 1.0 10.970725970058666 -6.250728548922484 24.949810436142716 0.9302251775011804 0.8360092006506039 0.153201881077767 0.08693563824421997 772.3224260179363 1799043.0454365436 0.010060329940200006 0.026322768310639916 5.613987626294004e-07 6.250728548922484 -0.09421597685057648 QMNMS(ph)PPPGNAGPVIMSIEEK ddPTM_A549_MK2206_60min_R1 11 QMNMSPPPGNAGPVIMSIEEK 21 0 B4DEH8;G3V4T2;Q92843-2;Q86U42-2;Q86U42 B4DEH8 PABPN1 Polyadenylate-binding protein 2 1 QMNMS(0.997)PPPGNAGPVIMS(0.003)IEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(0.999)PPPGNAGPVIMS(0.001)IEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(0.999)PPPGNAGPVIMS(0.001)IEEK;QMNMS(1)PPPGNAGPVIMSIEEK 95.652 2.8936999999999995e-07 38998000.0 14794.27 17626.15 15133.16 14583.300000000001 23930.22 19161.37 17318.460000000003 17692.929999999997 26855.699999999997 23835.27 24300.98 True False 17291.181090825332 18523.24574762626 17279.269643621505 18156.209154669214 20410.11633817074 21189.013455112014 20465.00000822274 20200.957009825634 20772.926829740452 18450.865952686057 18266.375993071444 0.9466125682173623 1.0140624366131656 0.9459604713149256 0.9939688727285578 1.1173599156128413 1.1600009472677637 1.120364543902154 1.1059094052092209 1.137222119900508 1.0100999760261473 1.0 14.156902814531016 -6.656123237066884 5.611101814065151 1.0838696965814176 0.9731619756600959 0.5625140241532269 0.04980038957212912 0.16289048291155936 7.545296578434615 0.008926299178733879 0.018761219357671093 2.207378270020303e-07 6.656123237066884 -0.11070772092132175 QMNMS(ph)PPPGNAGPVIMSIEEK ddPTM_A549_PD325901_60min_R1 16 QMNMSPPPGNAGPVIMSIEEK 21 0 B4DEH8;G3V4T2;Q92843-2;Q86U42-2;Q86U42 B4DEH8 PABPN1 Polyadenylate-binding protein 2 1 QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK 94.08 4.1041000000000003e-07 67595800.0 38771.700000000004 39405.4 40085.49999999999 39872.0 43606.4 40953.1 39318.49999999999 42953.3 41695.5 43299.8 45437.4 True False 42707.77444178302 42726.23135126335 42805.9430836934 42334.80288411792 40543.636897913246 40619.59153155704 40814.78703340875 42096.562735288026 39943.183135007035 40565.84323840988 39848.887851410065 1.0717431964734692 1.0722063689853132 1.074206719226637 1.06238354861941 1.0174345906238031 1.0193406572103292 1.0242390499228076 1.05640495896044 1.0023663215884113 1.0179918543692668 1.0 15.282251839934702 -6.445968203844097 0.31528003576057534 0.9967928645323973 1.1088392596994887 0.6405740980356954 0.016789958300452767 1.354423862423503 0.1640896783308965 0.007152554403504442 0.05333515816739336 3.581226555038224e-07 6.445968203844097 0.11204639516709136 QMPSESLDPAFS(ph)PR ddPTM_A549_MK2206_60min_R1 5 QMPSESLDPAFSPR 14 0 Q15018 Q15018 FAM175B BRISC complex subunit Abro1 1 QMPS(0.06)ES(0.063)LDPAFS(0.876)PR;QMPS(0.004)ES(0.203)LDPAFS(0.793)PR;QMPS(0.025)ES(0.015)LDPAFS(0.961)PR;QMPS(0.001)ES(0.004)LDPAFS(0.995)PR;QMPSESLDPAFS(1)PR 82.90799999999999 0.00034702 12199470.0 6655.59 8942.199999999999 7141.2699999999995 7236.580000000001 10025.6 7780.0 7555.049999999999 7670.85 11433.5 10294.4 11608.3 True False 7778.890878447271 9397.319784775662 8154.009468472208 9009.542424862424 8550.847520832016 8603.274436053967 8927.70479084879 8758.21647849288 8843.830505547707 7968.887890228691 8725.638737218464 0.8914981599303532 1.0769778657798654 0.9344885473761342 1.0325367226622613 0.9799680892539259 0.9859764648927577 1.023157737756026 1.0037335652157426 1.0135453428555443 0.9132727276729992 1.0 13.09104502851029 -5.234906958581615 24.56928982101181 1.0049092845525944 0.8914979680900288 0.3089731133573326 0.04340829593284106 3840.6454360134294 3556410.1877639405 0.003829022877127939 0.41217582067765873 5.8222793846886165e-06 5.234906958581615 -0.11341131646256564 QMPSESLDPAFS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QMPSESLDPAFSPR 14 0 Q15018 Q15018 FAM175B BRISC complex subunit Abro1 1 QMPSES(0.004)LDPAFS(0.996)PR;QMPSESLDPAFS(1)PR 109.35 3.0106e-14 4232000.0 2017.2 2411.4 1764.4 1981.9 2730.9 2507.9 2174.7 2174.8 2463.9 2363.2 2527.5 True False 2221.9846590158477 2614.617140809037 1884.1427941991174 2104.317461778525 2539.09100509355 2487.476493891595 2257.4593985415004 2131.421907902406 2360.350851443053 2213.987148693766 2216.6335231425865 1.0024140823538907 1.1795441661922614 0.850001939665657 0.9493303425255304 1.1454717158178704 1.1221866257643829 1.018417963534646 0.9615580950344135 1.064835854371053 0.9988061290144756 1.0 11.114154553266651 QMQVLHPAAR ddPTM_A549_MK2206_60min_R1 2 QMQVLHPAAR 10 0 P50991 P50991 CCT4 T-complex protein 1 subunit delta 0 ; 64.297 0.006578699999999999 2128390.0 1280.1399999999999 1142.71 1107.13 1138.83 1453.85 940.61 1293.6599999999999 996.4200000000001 1499.69 1669.95 1914.5 False True 1496.1963355818932 1200.8690580909624 1264.1376817890427 1417.8434011240215 1239.9905909034494 1040.144725873614 1528.701276593727 1137.6655864082702 1160.0126095128214 1292.7071351693542 1439.076812488027 1.0396917819800822 0.8344718278204859 0.8784365579509748 0.9852451160495771 0.861656987412384 0.7227861062366107 1.062279138492092 0.790552371170066 0.806081092716149 0.8982891836985314 1.0 10.490927884410906 -5.245215000991607 23.23284263149753 0.8940109435288048 1.0396920799946627 0.17311519128456987 0.09557356769929518 1758.773782270906 2518402.510389643 0.013847276639830248 0.450914387994742 5.685713853015373e-06 5.245215000991607 0.1456811364658579 QMQVS(ph)LTSK ddPTM_A549_MK2206_60min_R1 1 QMQVSLTSK 9 0 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 QMQVS(0.997)LT(0.003)S(0.001)K 88.338 0.0011214 6829600.0 3588.9 4699.7 3634.7 3180.2 5082.5 4620.9 3276.8 3763.3 5922.8 4742.4 5563.4 True False 4194.618579819279 4938.894655958285 4150.155114574291 3959.349142764604 4334.870982747039 5109.8805708948275 3872.1521444137793 4296.759299622892 4581.29525676809 3671.088546260158 4181.8542379712135 1.0030523162983935 1.1810298434395796 0.9924198401969406 0.9467927186016518 1.0365906452181988 1.2219174270822593 0.9259414422565615 1.0274770604408785 1.0955176809296592 0.8778614311629264 1.0 12.029927061123066 -7.021438860160397 24.898128330097606 1.0491450431932512 1.03291978953989 0.0 0.10058439704498749 5078.751692949092 5898245.135346186 0.012829063425585197 0.022392738384399563 9.518338375473915e-08 7.021438860160397 -0.016225253653361138 QMQVS(ph)LTSK ddPTM_A549_PD325901_60min_R1 4 QMQVSLTSK 9 0 P55085 P55085 F2RL1 Proteinase-activated receptor 2;Proteinase-activated receptor 2, alternate cleaved 1;Proteinase-activated receptor 2, alternate cleaved 2 1 QMQVS(0.997)LT(0.003)SK;QMQVS(0.663)LT(0.337)SK;QMQVS(0.978)LT(0.018)S(0.004)K;QMQVS(0.924)LT(0.067)S(0.009)K 121.68 0.0001233 29327700.0 12276.099999999999 13824.4 13122.2 12274.0 16419.300000000003 12469.8 12483.1 15261.0 15203.9 15935.2 16126.899999999998 True False 13522.360634812818 14989.430704736014 14012.75140219885 13032.137103723488 15266.06501150994 12368.25008314902 12958.151201514427 14956.607382977103 14564.932955986467 14929.048752481749 14143.39353684201 0.9560902480432671 1.0598185411224095 0.9907630276777033 0.9214292927490266 1.079377800790418 0.8744895665195956 0.9161981647303984 1.0574977882088028 1.0298046871174442 1.0555492720748518 1.0 13.787840698521181 -8.276560735397432 24.87070390009265 1.017724441058108 0.9738606945795995 0.19369794694711717 0.05919571351052253 1272.7104017600675 2093275.20525445 0.009376279524974296 0.011360284416596407 5.289800150168511e-09 8.276560735397432 -0.04386374647850866 QMRS(ph)PVK ddPTM_A549_MK2206_60min_R1 3 QMRSPVK 7 1 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QMRS(1)PVK;QMRS(1)PVK;QMRS(1)PVK 57.858999999999995 0.0095227 12458100.0 5202.700000000001 5569.0 5482.9 4593.1 6535.5 5081.2 4277.5 4633.299999999999 7274.5 7444.500000000001 7901.9 True False 6080.78856619738 5852.438312877778 6260.457665749408 5718.4097061920975 5574.136607524499 5618.889211372415 5054.666381143166 5290.084463886149 5626.837364989441 5762.782279570202 5939.640148654549 1.0237637994912543 0.9853186668561859 1.054012955173308 0.9627535613394752 0.9384636893848115 0.9459982542284501 0.8510054910124736 0.8906405660087778 0.9473364082947071 0.9702241441134428 1.0 12.53615981308246 -6.395266276277299 6.7388683552647715 0.9540812045327873 1.0171801943749827 0.39561504487607746 0.042425991164962644 0.2795054155798667 14.13348578228416 0.007216791794287331 0.016870871181760484 4.024701946117767e-07 6.395266276277299 0.06309898984219542 QMRS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 QMRSPVK 7 1 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QMRS(1)PVK;QMRS(1)PVK 57.559 0.0097256 25734000.0 6282.1 6049.6 6189.2 5825.6 7142.7 5531.2 5966.6 6459.9 6700.4 6836.3 6746.6 True False 6919.854167362407 6559.421023073043 6609.236330683047 6185.434081102458 6641.0213929772935 5486.155741063514 6193.662228048799 6331.052226806484 6418.8054892686505 6404.654851309747 5916.810970221079 1.1695242931013985 1.1086075009132756 1.1170267841827126 1.045399981887767 1.122398776368067 0.9272149758839645 1.0467906206943394 1.0700108992276844 1.0848420748227512 1.082450476032436 1.0 12.530604089386506 -5.8299625768323535 0.8476453368361478 1.0387677887145295 1.17975804281091 0.3852010542647166 0.049113396135207966 0.9486792098155535 0.8064184190950212 0.007987788644116322 0.10329781308385871 1.479235848470915e-06 5.8299625768323535 0.14099025409638055 QMS(ph)FDLTK ddPTM_A549_MK2206_60min_R1 7 QMSFDLTK 8 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;H0Y8E4;E9PH70;A0A1W2PPB7;Q9ULH0-3 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 QMS(1)FDLTK;QMS(0.999)FDLT(0.001)K;QMS(0.996)FDLT(0.004)K;QMS(1)FDLTK;QMS(0.999)FDLT(0.001)K;QMS(1)FDLTK;QMS(0.855)FDLT(0.145)K 91.855 0.0025998 96642800.0 25050.6 29688.600000000002 27176.899999999998 23649.500000000004 36159.49999999999 28928.7 26108.8 26127.100000000002 38767.8 40449.600000000006 41911.5 True False 29278.52885163168 31199.622929736604 31030.99307598262 29443.628561666395 30840.485450200005 31989.91583268309 30852.431002218756 29830.69643588801 29986.9551994553 31312.00726653272 31503.71785144526 0.9293674159251176 0.9903473322373376 0.9849946353096559 0.934608058023718 0.9789474879005485 1.0154330350319438 0.9793266670207743 0.946894476917095 0.9518544871706189 0.9939146679189883 1.0 14.943234475125033 -6.222403889840004 0.0029983737902102045 1.930873764863179 9.032371919661834e-09 0.12587401860546676 0.025202462086570128 87689.45288436714 53.07903698935749 16808.896933684748 17375.406344544306 5.992335354118612e-07 6.222403889840004 -1.9308737558308071 QMS(ph)FDLTK ddPTM_A549_PD325901_60min_R1 5 QMSFDLTK 8 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;H0Y8E4;E9PH70;A0A1W2PPB7;Q9ULH0-3 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 QMS(0.993)FDLT(0.007)K;QMS(0.997)FDLT(0.003)K;QMS(1)FDLTK;QMS(0.906)FDLT(0.094)K;QMS(0.956)FDLT(0.044)K 91.855 0.0025998 76383800.0 25163.5 27284.3 26579.800000000003 22011.2 31246.1 24066.100000000002 26343.499999999996 28049.600000000002 28430.0 28457.9 29257.1 True False 27718.07999561038 29583.643715259193 28383.665065321748 23370.7818329378 29051.48172919313 23870.113660690033 27346.016308216316 27490.12872351449 27235.18596798817 26661.06333734441 25658.662176037564 1.0802620887029757 1.152969064103706 1.1062020642615205 0.9108339972129802 1.1322290121705603 0.930294553041123 1.0657615787059451 1.071378099719763 1.0614421664362108 1.0390667741922641 1.0 14.647158330869033 -6.030248496632583 24.959417064622823 1.0285198252475205 1.1198581235320662 0.28060464511499017 0.061901838008546074 546.3740431565709 450838.296273789 0.00783528391744656 0.020764689660191033 9.327204597615242e-07 6.030248496632583 0.09133829828454565 QMS(ph)LCGTPEK ddPTM_A549_MK2206_60min_R1 1 QMSLCGTPEK 10 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 QMS(0.608)LCGT(0.392)PEK 89.62899999999999 0.00067884 5197900.0 4785.6 5236.3 4889.7 5333.6 6944.5 6236.8 5207.3 5057.6 8930.6 7687.9 8193.3 True False 5593.292283313316 5502.805303954378 5583.132985867863 6640.332239434403 5922.973249323521 6896.774036347219 6153.3990056170205 5774.530288250403 6907.8333592377085 5951.1980505215615 6158.677486423683 0.9081969782706248 0.8935043791601163 0.9065473875154914 1.0782074973194309 0.9617281084096783 1.119846598811289 0.9991429197553697 0.9376250503423661 1.1216423289684319 0.9663110405830645 1.0 12.588404864701827 -6.25112651462413 23.17793475294176 1.0445991980896534 0.9018250121670567 0.4025955944470009 0.06131509877544127 166.75256522272605 374769.1040404045 0.00876275829268793 0.022866987106817543 5.608845605643057e-07 6.25112651462413 -0.14277418592259672 QMVIDVLHPGK ddPTM_A549_PD325901_60min_R1 1 QMVIDVLHPGK 11 0 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4 E7ETK0 RPS24 40S ribosomal protein S24 0 57.019 0.016125 1440000.0 1189.4 1166.9 1620.3 1533.0 2086.7 1902.1 1854.1 1716.9 2356.6 1552.5 1636.4 False True 1310.147012409998 1265.2387582359054 1730.2633016554237 1627.6899283043927 1940.1373907241973 1886.609928239246 1924.6587901024495 1682.6550826180048 2257.560297297253 1454.4748850486926 1435.1331739942743 0.9129097119005244 0.8816176652891958 1.2056465093338626 1.1341734396496408 1.3518866582425875 1.31458875205875 1.3411011779107047 1.1724731287026315 1.5730667635631281 1.0134772935396554 1.0 10.486968903476958 -5.865962260444846 1.5797481894842502 1.278891544862587 0.8605102544413354 0.37116160075658866 0.16054390226000917 0.41255207553227413 1.7892319230770763 0.029464906881651223 0.18658852433926032 1.3615629951577437e-06 5.865962260444846 -0.4183812904212516 QNAPPKGTDTQTPAVLS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 QNAPPKGTDTQTPAVLSPSK 20 1 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 QNAPPKGTDTQT(0.001)PAVLS(0.841)PS(0.157)K;QNAPPKGTDTQTPAVLS(0.834)PS(0.166)K 116.08 1.0318000000000001e-14 26883000.0 4661.8 5582.7 6235.4 4623.8 8194.3 5257.6 4865.9 4316.1 9440.3 9061.5 8567.9 True False 5448.597869932716 5866.835584360347 7119.673481007107 5756.631207570269 6988.929324923573 5813.955742287574 5749.971044770203 4927.92039250189 7302.087123061353 7014.500856514931 6440.253967989636 0.8460222061139506 0.910963389568271 1.1054957640481926 0.8938515835218275 1.0851946770517202 0.9027525577694625 0.892817437534236 0.7651748544382591 1.1338197467608164 1.0891652551870636 1.0 12.652901866035323 -8.795245873455935 24.99999449349737 1.0631926492637933 0.933262857354334 0.3162456324447739 0.0967120400143518 185.92478616420937 137491.06331219038 0.01760156776636215 0.018738802263326793 1.6023379789300886e-09 8.795245873455935 -0.1299297919094593 QNAPPKGTDTQTPAVLS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 QNAPPKGTDTQTPAVLSPSK 20 1 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 QNAPPKGTDTQT(0.001)PAVLS(0.878)PS(0.121)K;QNAPPKGTDTQTPAVLS(0.835)PS(0.165)K 145.75 1.5634e-21 40115000.0 4749.3 4944.6 5784.2 5600.3 6022.5 7716.7 7842.5 7259.3 7554.5 6968.7 6802.2 True False 5231.4454397501295 5361.2987950752095 6176.750595220205 5946.217811795885 5599.500376497091 7653.857753663729 8140.950629080669 7114.507566689321 7237.010636481411 6528.695092714217 5965.572522698517 0.8769393750297907 0.8987064987770922 1.0353994644634983 0.9967555987578746 0.9386358736217603 1.2830047283041863 1.3646553785248634 1.192594263102024 1.213129269478357 1.094395394217917 1.0 12.542444886291186 -7.233604987196484 24.220334495313825 1.1440487453493073 0.9538984062123538 0.557640242770287 0.10269163799980811 456.92617134800025 397598.02028073044 0.01927705086842075 0.03338342380479129 5.8397601852435594e-08 7.233604987196484 -0.19015033913695356 QNDT(ph)PKGPQPPTVS(ph)PIR ddPTM_A549_MK2206_60min_R1 1 QNDTPKGPQPPTVSPIR 17 1 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 2 QNDT(1)PKGPQPPT(0.218)VS(0.782)PIR 63.122 0.0015951 10876000.0 3306.3 3924.1 3410.4 2669.4 4999.0 3504.7 2894.5 3824.6 5062.2 4878.2 5242.5 True False 3864.3226087259304 4123.819928813737 3894.0460018004696 3323.4031198339208 4263.6537221352555 3875.5650277684213 3420.3931829851326 4366.748762346269 3915.619782672286 3776.211231942962 3940.642564360659 0.980632611461651 1.0464841358893449 0.9881753897240997 0.8433657875725451 1.0819691592168048 0.9834855520313358 0.8679785408398406 1.1081311463869707 0.9936500757732558 0.9582729644386373 1.0 11.9442151805447 -8.264744333818587 24.99873614033101 1.0052523665127606 0.9738366775811029 0.07320716740147692 0.0729240458847063 821.4541480973146 6213466.6443201 0.011166326538635012 0.013796622474193488 5.4357023338764186e-09 8.264744333818587 -0.03141568893165769 QNDT(ph)PKGPQPPTVS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 QNDTPKGPQPPTVSPIR 17 1 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 2 QNDT(1)PKGPQPPT(0.002)VS(0.998)PIR;QNDT(1)PKGPQPPT(0.082)VS(0.918)PIR 112.86 1.4727e-09 37714000.0 8237.5 8426.9 8378.7 6891.2 8834.9 7733.6 7287.299999999999 8613.900000000001 8482.2 9437.1 9957.099999999999 True False 9073.76493587301 9137.064437208117 8947.328967216126 7316.853772949273 8214.367102750379 7670.620125666905 7564.622189263569 8442.089007026176 8125.722631645066 8841.239895454439 8732.439823257386 1.039087027168119 1.0463358032967007 1.0246081448378745 0.8378934090633023 0.9406726263229198 0.878405151471814 0.8662667412967988 0.9667503215472599 0.9305214574744127 1.0124592982487302 1.0 13.092169080457174 -6.028355470321866 24.546662180553415 0.9436887433883713 1.0409015945369329 0.4411128038834584 0.052307002339033196 433.6130109752167 375368.87919064396 0.007787557060500792 0.020654239765097043 9.367949257715896e-07 6.028355470321866 0.0972128511485616 QNDTPKGPQPPTVS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 QNDTPKGPQPPTVSPIR 17 1 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 QNDTPKGPQPPT(0.002)VS(0.998)PIR;QNDTPKGPQPPTVS(1)PIR 183.05 9.686599999999999e-40 92879000.0 16452.5 23943.0 22823.0 22287.0 29712.0 17492.1 17518.4 14722.8 35463.0 34311.0 40329.0 True False 19229.279774994207 25161.59643117844 26059.644586878974 27747.316000501454 25341.404159248414 19343.10241168375 20701.26651815746 16809.801986683997 27430.687122774143 26560.121269975596 30314.196276223374 0.6343324955666562 0.8300268363345552 0.8596515094585763 0.9153241520133844 0.8359583057501241 0.6380872590330001 0.6828901657008233 0.5545191379482025 0.904879247756574 0.87616115657362 1.0 14.887705952155564 -8.966959229152465 13.71791158889632 0.9580647096847293 0.7522898801921571 0.3573416859566779 0.10892152972456054 1.083157213494744 449.10181803524074 0.02019746367146595 0.02123694419769205 1.0790480167178828e-09 8.966959229152465 -0.2057748294925722 QNDTPKGPQPPTVS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 QNDTPKGPQPPTVSPIR 17 1 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 QNDTPKGPQPPT(0.001)VS(0.999)PIR;QNDTPKGPQPPTVS(1)PIR 174.55 1.4034999999999999e-30 162826000.0 21240.3 20809.3 22384.3 24630.0 25659.0 36974.0 35006.0 35945.0 31456.0 32005.0 32840.0 True False 23396.59961971757 22562.97274124471 23903.433205730722 26151.339161211472 23856.800358744495 36672.89600269064 36338.1724860182 35228.04877669302 30134.013711186613 29984.198837992524 28800.888189911988 0.8123568782129655 0.7834123931340348 0.8299547238999149 0.9080046069680391 0.8283355777583538 1.2733251752817805 1.261703189374079 1.2231584159627498 1.0462876530919478 1.0410859081941441 1.0 14.813825683141442 -7.2219711818177315 24.224210555973205 1.074845831868352 0.8337534640030821 0.6749084465278417 0.10109069479564706 249.6998965626976 153257.05415254366 0.017971897581884656 0.031127846816972123 5.998308775027559e-08 7.2219711818177315 -0.24109236786526989 QNEAAKEAET(ph)PQAK ddPTM_A549_MK2206_60min_R1 2 QNEAAKEAETPQAK 14 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 QNEAAKEAET(1)PQAK;QNEAAKEAET(1)PQAK 56.54 0.0054795 12080500.0 4853.5 6757.799999999999 5994.5 5072.5 6052.700000000001 3896.5 3557.5 3214.6 6640.4 9913.5 10666.5 True False 5672.652143317699 7101.743155102434 6844.610238620957 6315.262727713177 5162.355847963209 4308.825043712631 4203.851700974124 3670.2793942996186 5136.360002539818 7674.03346477523 8017.713669576144 0.7075149321985682 0.8857566443225039 0.8536860407716202 0.7876637889523228 0.6438688210520889 0.5374131855148198 0.5243205075938263 0.4577713230427257 0.6406265195064458 0.9571348867065388 1.0 12.96897518121555 -10.61861473493935 1.0028871342093137 0.9914832546554874 0.6727798127576587 0.45416468401131693 0.12925395571059597 0.41301811774963487 0.7684829106530768 0.08775637856837644 0.026490805810100965 2.4064966700204666e-11 10.61861473493935 -0.3187034418978286 QNEAAKEAET(ph)PQAK ddPTM_A549_PD325901_60min_R1 1 QNEAAKEAETPQAK 14 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 QNEAAKEAET(1)PQAK 70.094 0.00099504 19291000.0 4375.2 5013.9 5575.8 5243.3 5380.1 6755.5 5988.0 6936.9 5544.0 5804.6 5859.3 True False 4819.367083147995 5436.438949283578 5954.207318009197 5567.1667326017105 5002.220336337398 6700.485447778882 6215.876616759327 6798.538087607221 5311.004959779331 5438.09656538077 5138.64324516295 0.9378676147024816 1.0579522044852883 1.158711946701874 1.0833923405447796 0.9734515703237488 1.303940578884535 1.2096338119230958 1.3230220046909746 1.0335422613310676 1.0582747830372732 1.0 12.327171779906894 -8.97084004009272 24.999580626082373 1.014797919929207 1.1339863488545538 0.12873731859956838 0.11506399294488008 234.92343389543095 201407.5421942212 0.02044196221606758 0.02147474190385617 1.0694487074265918e-09 8.97084004009272 0.11918842892534687 QNGDDPLLTYR ddPTM_A549_PD325901_60min_R1 2 QNGDDPLLTYR 11 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 108.47 0.00033160000000000004 6443600.0 4174.7 4635.4 4088.0 3816.0 5650.1 3515.5 4514.1 4435.9 4671.5 4933.4 4711.3 False True 4598.51247074829 5026.041425937718 4365.436263141004 4051.7056532351994 5253.256467786836 3486.8709335603103 4685.886545710299 4347.42249460377 4475.173100578847 4621.904282060689 4131.839967391362 1.1129454448962026 1.2164172537183018 1.0565356590751802 0.9806056587891628 1.271408503050877 0.8439027070454878 1.1340919742031381 1.0521759140997216 1.0830944895971488 1.1186067995219886 1.0 12.012568662117252 -2.0000000000000004 0.1818640570186182 1.0185231273451723 1.5791081987862927 0.04760826617863101 0.10775000717950488 82.38203551812572 0.8701711619524317 0.09884801948762503 12.944589955254155 0.00999999999999999 2.0000000000000004 0.5605850714411205 QNGKLEDNPSSGS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 QNGKLEDNPSSGSPPR 16 1 Q05D32;H0YMH7;Q05D32-2 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 QNGKLEDNPS(0.109)S(0.109)GS(0.783)PPR;QNGKLEDNPS(0.005)S(0.045)GS(0.95)PPR 80.316 8.1634e-05 20694900.0 2795.4 2786.1 2609.3 2782.3 3366.0 2559.8 2633.1 2870.6 3994.9 3824.2 4206.0 True False 3267.195179031688 2927.900589604737 2979.3379757500493 3463.963624902193 2870.8658589132383 2830.6763369422792 3111.5001866015373 3277.5163408437998 3090.061528544413 2960.3105639777527 3161.5341203053745 1.0334208187245841 0.9261012148500644 0.9423709700347227 1.0956590987440005 0.9080610076211797 0.895348975917066 0.9841741598224458 1.0366854242671348 0.9773930664540612 0.9363525590202438 1.0 11.626409074292525 -7.987117776077377 24.948991812771677 0.9934283646351909 0.9647750781479444 0.024828628325614943 0.0582362615482293 572.1411879481592 1108061.708259125 0.008503063333740653 0.01174469652439268 1.030106728492333e-08 7.987117776077377 -0.02865328648724652 QNGSNDS(ph)DRYS(ph)DNEEDSK ddPTM_A549_MK2206_60min_R1 1 QNGSNDSDRYSDNEEDSK 18 1 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 QNGS(0.035)NDS(0.96)DRY(0.022)S(0.982)DNEEDS(0.001)K 73.389 0.00016763 12654000.0 1052.2 845.13 893.09 645.96 1132.6 1327.7 1435.6 1329.5 1540.8 1519.5 997.47 True False 1229.7856361798451 888.1435071579095 1019.7435912936843 804.2202289982458 965.9960403461477 1468.1963327440687 1696.4299372926075 1517.9606964229895 1191.811260152001 1176.2438946614186 749.7706702284834 1.6402157153000971 1.1845535474030462 1.3600739956698094 1.072621617424925 1.2883886749688038 1.9581938731967923 2.262598424629816 2.024566653107956 1.589567727140902 1.5688048911048664 1.0 9.550305580693431 QNGSNDS(ph)DRYS(ph)DNEEDSK ddPTM_A549_PD325901_60min_R1 2 QNGSNDSDRYSDNEEDSK 18 1 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 QNGS(0.033)NDS(0.967)DRY(0.001)S(0.97)DNEEDS(0.029)K;QNGS(0.413)NDS(0.587)DRY(0.009)S(0.988)DNEEDS(0.003)K 98.3 3.3586e-07 44163000.0 3541.9 3875.9 3909.8 3294.8 4165.1 2959.0 3561.8 3323.9 3825.3 3964.6000000000004 3065.2 True False 3901.471080591033 4202.535695472232 4175.142539537352 3498.3123129662827 3872.55774481495 2934.9028850533236 3697.346248091748 3257.602206950893 3664.5359438390806 3714.2744793971297 2688.1998319037207 1.4513322388790204 1.563327117871328 1.55313696920389 1.3013587276690137 1.4405765891565043 1.0917725870754533 1.3753985861510054 1.2118154938816192 1.363193279140986 1.3816958230991208 1.0 11.392424671953142 -14.024850298253487 0.08859822113573121 3.739998588471116e-14 1.7247690283180102 0.2091451399099329 0.15084300055966257 51.32379057420324 0.4070360135180508 10.899703671618791 1.3126273241650412 9.443863511159307e-15 14.024850298253487 1.7247690283179729 QNGSNDS(ph)DRYS(ph)DNEEDSKIELK ddPTM_A549_MK2206_60min_R1 2 QNGSNDSDRYSDNEEDSKIELK 22 2 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 QNGS(0.04)NDS(0.96)DRY(0.004)S(0.996)DNEEDSKIELK;QNGS(0.069)NDS(0.879)DRY(0.27)S(0.776)DNEEDS(0.006)KIELK 104.91 1.8765999999999998e-10 34657300.0 4159.700000000001 5128.700000000001 5050.0 3783.6 7808.6 6122.799999999999 5057.8 5151.6 8564.599999999999 7767.299999999999 7590.5 True False 4861.755665099132 5389.728923551137 5766.165936280894 4710.582169852257 6659.965283989868 6770.710632014297 5976.736790776367 5881.855076113328 6624.731774855803 6012.661535375868 5705.569362857332 0.8521070126232554 0.9446434844237837 1.0106206006043918 0.8256112353164368 1.167274440189187 1.1866844834261283 1.0475267954297967 1.0308971291110047 1.1610991565508124 1.053823230073702 1.0 12.478155145932307 -6.763739060317757 24.99995413980508 1.085808495307303 0.9181579349610941 0.5983164864235289 0.07231670170530483 39.901858534306896 433783.0214905219 0.01192938212359854 0.023336157764758406 1.7229034461702075e-07 6.763739060317757 -0.16765056034620895 QNGSNDS(ph)DRYS(ph)DNEEDSKIELK ddPTM_A549_PD325901_60min_R1 2 QNGSNDSDRYSDNEEDSKIELK 22 2 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 QNGS(0.028)NDS(0.971)DRYS(1)DNEEDSKIELK;QNGS(0.005)NDS(0.995)DRYS(0.999)DNEEDS(0.001)KIELK 157.16 4.1876e-33 584250000.0 12616.5 13920.900000000001 14687.5 11254.8 12814.7 10150.7 12240.2 13566.6 12505.3 13700.8 15065.2 True False 13897.317792223597 15094.063098402794 15684.282073112396 11949.983434494634 11914.639680315027 10068.036064653863 12706.007509094443 13296.003520208184 11979.745729352167 12835.729149806846 13212.275906171193 1.0518488934773482 1.1424271795105834 1.187099193545192 0.9044606333805846 0.9017855640412364 0.7620213304773088 0.9616819690512002 1.0063371075983876 0.9067132577633097 0.9715002351571791 1.0 13.68959138176878 -6.265913942937696 24.960979780250785 0.9385986488569809 1.1286553007002502 0.6146044422534722 0.07019155684790532 202.42679344129465 1129225.095083142 0.01066428473187021 0.025588930664554567 5.421083005297401e-07 6.265913942937696 0.19005665184326936 QNGSNDS(ph)DRYS(ph)DNEEGK ddPTM_A549_MK2206_60min_R1 1 QNGSNDSDRYSDNEEGK 17 1 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 2 QNGS(0.457)NDS(0.548)DRY(0.204)S(0.79)DNEEGK 40.756 0.028542 9169100.0 695.67 562.26 479.64 439.96 623.49 629.16 365.47 690.02 862.41 942.2 596.06 True False 813.0820885014572 590.8766323933667 547.6601642926274 547.7502197505546 531.7754469322085 695.7372935973924 431.8711682796944 787.8324480976236 667.0755119857781 729.3563656136806 448.0418515808895 1.8147458449083373 1.3187978540587069 1.2223415343014064 1.222542532171604 1.1868878879414275 1.552839966048984 0.9639080964330948 1.7583903050971752 1.4888687510598422 1.6278755277887307 1.0 8.807489690468566 -10.831515816635193 1.1117896082789278 1.0028210584479609 1.3830558591751148 0.0 0.30259295259467617 0.5358704274667726 1.1898663607757118 0.15446243280006663 0.039249199188570325 1.473954859815508e-11 10.831515816635193 0.3802348007271539 QNGSNDS(ph)DRYS(ph)DNEEGK ddPTM_A549_PD325901_60min_R1 1 QNGSNDSDRYSDNEEGK 17 1 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 2 QNGS(0.431)NDS(0.565)DRY(0.014)S(0.99)DNEEGK 46.982 0.0072334 14880000.0 1197.2 1397.7 1160.2 822.95 1424.7 878.17 1256.3 1265.6 1386.8 1318.3 1039.2 True False 1318.7388626679408 1515.4890842285774 1238.938148849363 873.7817524449451 1324.6339869481778 871.0184746763358 1304.1091839737385 1240.3566151560071 1328.5176187269078 1235.0623130175152 911.3849880315635 1.4469613609899286 1.6628418331771913 1.3594015318655386 0.9587405585121224 1.4534296749929598 0.955708604063786 1.4309092217882504 1.3609579172847321 1.4576909167620589 1.3551488440522153 1.0 9.831916797036794 -10.890126418997932 1.1057709720314355 0.9973603603436265 1.345566606668789 0.0 0.22560492446409527 0.5425272354594226 1.1633861346106664 0.14697021855198494 0.034154381003567595 1.2878746090606329e-11 10.890126418997932 0.3482062463251625 QNGSNDS(ph)DRYS(ph)DNEEGKKK ddPTM_A549_MK2206_60min_R1 1 QNGSNDSDRYSDNEEGKKK 19 3 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 2 QNGS(0.091)NDS(0.907)DRY(0.053)S(0.948)DNEEGKKK 50.028999999999996 0.0055191 7005300.0 698.71 678.99 631.07 539.44 1092.5 545.51 501.14 595.74 983.77 928.76 1032.9 True False 816.6351661805928 713.5476907992246 720.5652153284726 671.602824216382 931.7946972259989 603.2355061197686 592.1906511387697 680.1879693772333 760.947665757875 718.9524709481661 776.4024234102283 1.051819445119257 0.9190436161508565 0.9280821306088931 0.8650189695009837 1.2001439834940675 0.7769624204290211 0.7627367371390513 0.8760765665691926 0.9800943979740937 0.9260049289777819 1.0 9.600660810964454 -8.899497043831845 7.084643300036484 0.9912866707278123 0.9198053269504809 0.02072481226663736 0.11694062094752287 0.47073971868123116 29.110280651091433 0.020011351550921493 0.02122561593497778 1.2603842170847212e-09 8.899497043831845 -0.0714813437773314 QNGSNDS(ph)DRYS(ph)DNEEGKKK ddPTM_A549_PD325901_60min_R1 1 QNGSNDSDRYSDNEEGKKK 19 3 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 2 QNGS(0.005)NDS(0.99)DRY(0.014)S(0.992)DNEEGKKK 72.033 0.00026033 9379300.0 1184.6 1084.0 1113.8 854.99 1127.6 1009.1 1359.1 1214.4 1093.6 1260.5 1311.9 True False 1304.8597199435712 1175.3524842983302 1189.389165823496 907.8007904768252 1048.4012660088197 1000.8822241660392 1410.8212942280568 1190.1778393216305 1047.639795096442 1180.911814881724 1150.5446168192918 1.1341235279957131 1.0215618474211112 1.0337618797535995 0.7890183285429315 0.9112217385425262 0.8699203920774512 1.2262204121456028 1.0344473581666964 0.9105599033548715 1.0263937596321844 1.0 10.168101215391276 -5.412604516724174 1.8690386483869732 0.9632519697173096 1.1540843076546556 0.14451438786053894 0.10793647723348272 0.813334337457144 3.6573779160292625 0.015188273804148979 0.24162592413664472 3.867189761662923e-06 5.412604516724174 0.190832337937346 QNGSNDSDRYS(ph)DNEEDSK ddPTM_A549_MK2206_60min_R1 4 QNGSNDSDRYSDNEEDSK 18 1 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 QNGSNDS(0.001)DRYS(0.999)DNEEDSK;QNGSNDS(0.002)DRY(0.001)S(0.997)DNEEDSK;QNGSNDSDRYS(1)DNEEDSK;QNGSNDS(0.003)DRYS(0.997)DNEEDSK 188.6 4.651899999999999e-71 313640000.0 4599.4 4164.2 4513.2 4095.8 7330.900000000001 6403.799999999999 4848.8 6465.6 6704.6 5547.0 5110.4 True False 5375.666275466246 4376.1399932637205 5153.239624479789 5099.271183867446 6252.53432118451 7081.44586550159 5729.764196116189 7382.118600069558 5186.018805046147 4293.928847441187 3841.346640135186 1.3994223326008046 1.1392202795605328 1.341519031539011 1.3274696770630392 1.6276933343782973 1.8434800420022435 1.4916030061568577 1.921752784021013 1.3500522839729034 1.1178186322935109 1.0 11.907396442084616 -9.807579471175645 1.0980409976775307 1.0591309932865698 1.4964943167474944 0.36203500789165366 0.2214566068169887 0.3403848191042165 0.8374511082264732 0.0734457265196429 0.04612118842605323 1.557473008100879e-10 9.807579471175645 0.43736332346092466 QNGSNDSDRYS(ph)DNEEDSK ddPTM_A549_PD325901_60min_R1 3 QNGSNDSDRYSDNEEDSK 18 1 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 QNGSNDSDRYS(1)DNEEDSK;QNGSNDS(0.02)DRYS(0.98)DNEEDSK;QNGSNDSDRYS(1)DNEEDSK 176.69 8.987099999999998e-68 300640000.0 6861.6 6302.7 7114.2 5535.3 7317.700000000001 4723.7 6321.799999999999 5720.9 6140.799999999999 6398.8 7048.5 True False 7558.184580757054 6833.8506483275705 7597.012393159911 5877.202909421594 6803.729996694517 4685.231753337741 6562.3795584217 5606.7921615407695 5882.723531207232 5994.778675973959 6181.579184122861 1.2226947767926275 1.1055185810577406 1.2289759892864487 0.9507607577877437 1.1006459343220296 0.7579344393697279 1.0616024421845003 0.9070161514620069 0.9516538340747575 0.9697811024359776 1.0 12.593759729598547 -6.266922869281916 24.96437952132802 0.9694794109626376 1.1777086657251712 0.5577237873448027 0.08832146081991742 227.9219566914764 1037649.0072792217 0.011094444811573472 0.026462253116665405 5.408503694645509e-07 6.266922869281916 0.20822925476253362 QNGSNDSDRYS(ph)DNEEDSKIELK ddPTM_A549_MK2206_60min_R1 4 QNGSNDSDRYSDNEEDSKIELK 22 2 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 QNGSNDSDRYS(1)DNEEDSKIELK;QNGSNDSDRYS(1)DNEEDSKIELK;QNGSNDSDRYS(1)DNEEDSKIELK;QNGSNDSDRYS(1)DNEEDSKIELK 246.35 2.6799999999999995e-99 3648550000.0 55776.6 61618.4 57119.5 48412.7 76887.0 57858.899999999994 53229.9 54517.1 84957.5 86730.9 83413.8 True False 65190.326473055255 64754.51336653407 65219.903999484515 60273.813673328696 65577.02415159307 63981.49039437053 62901.08381101405 62245.065876616565 65714.76189924954 67138.32945277388 62699.851356235995 1.0397205904471665 1.0327698067197049 1.0401923224495473 0.9613071222589747 1.0458880321583237 1.020440862464773 1.003209456648226 0.9927466258725955 1.0480848116510517 1.0707892921678583 1.0 15.936174402355466 -11.261999714524503 1.7757908598447951 0.9999551200230665 1.0240015272912564 0.0 0.032833874900116806 0.7018991916255493 3.992215459773382 0.01919596290149466 0.0038716839993408656 5.470163224649809e-12 11.261999714524503 0.02404640726818985 QNGSNDSDRYS(ph)DNEEDSKIELK ddPTM_A549_PD325901_60min_R1 5 QNGSNDSDRYSDNEEDSKIELK 22 2 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 QNGSNDSDRYS(1)DNEEDSKIELK;QNGSNDSDRYS(0.99)DNEEDS(0.01)KIELK;QNGSNDSDRYS(1)DNEEDSKIELK;QNGSNDSDRYS(1)DNEEDSKIELK;QNGSNDS(0.014)DRY(0.001)S(0.984)DNEEDSKIELK 286.71 2.2452999999999995e-140 5438269400.0 63664.5 65106.5 67692.5 58051.700000000004 77020.29999999999 58538.9 68991.9 71724.5 73745.7 72064.6 74052.0 True False 70127.67317267219 70593.25324628159 72286.52011807056 61637.42166402359 71610.65983361047 58062.17860691041 71617.42450831638 70293.89858071817 70646.42468657986 67514.42885737837 64944.07345430465 1.079816362643387 1.0869853012215467 1.113057993951244 0.9490846259804191 1.1026511893190145 0.8940335202066373 1.1027553508590306 1.0823758788425508 1.0878040278192198 1.0395779825064755 1.0 15.986910256443522 -11.024207554076598 1.3452810018233032 1.000323708446234 1.0575348346090963 0.028430343187040075 0.06735971795922172 0.8621877867848157 2.8054075044729267 0.0439872107779932 0.010165815207457952 9.45785052333377e-12 11.024207554076598 0.05721112616286228 QNGSNDSDRYS(ph)DNEEDSKIELKLEK ddPTM_A549_MK2206_60min_R1 3 QNGSNDSDRYSDNEEDSKIELKLEK 25 3 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 QNGSNDSDRYS(1)DNEEDSKIELKLEK;QNGS(0.01)NDS(0.046)DRY(0.069)S(0.874)DNEEDS(0.001)KIELKLEK;QNGS(0.002)NDS(0.037)DRYS(0.961)DNEEDSKIELKLEK 124.37 3.6344000000000005e-18 160648700.0 6347.200000000001 9555.400000000001 8673.3 6934.8 10184.6 5829.6 5551.5 5452.200000000001 11109.3 14752.3 15481.9 True False 7418.452185858888 10041.729045586699 9903.304359434671 8633.826311314999 8686.458831458041 6446.484402624703 6560.135690220056 6225.066046662222 8593.061287906685 11419.745184082678 11637.316951297145 0.6374710095897144 0.8628903971260664 0.8509955001552834 0.7419086673885458 0.7464314040608657 0.553949370770223 0.5637154782046935 0.5349227895669155 0.7384057101709226 0.9813039579376399 1.0 13.506470854699122 -10.202133934401902 0.9163873671674745 0.9803646791989081 0.6960023003082728 0.5265480125708788 0.10801774702980942 0.3492035101057403 0.5781785542398541 0.0546648461275787 0.023245563262551543 6.27864698394895e-11 10.202133934401902 -0.2843623788906353 QNGSNDSDRYS(ph)DNEEDSKIELKLEK ddPTM_A549_PD325901_60min_R1 6 QNGSNDSDRYSDNEEDSKIELKLEK 25 3 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 QNGSNDSDRYS(1)DNEEDSKIELKLEK;QNGS(0.005)NDS(0.021)DRY(0.001)S(0.973)DNEEDSKIELKLEK;QNGSNDSDRYS(1)DNEEDSKIELKLEK;QNGS(0.004)NDS(0.074)DRY(0.005)S(0.913)DNEEDS(0.004)KIELKLEK;QNGS(0.001)NDS(0.002)DRYS(0.997)DNEEDSKIELKLEK;QNGS(0.001)NDS(0.001)DRYS(0.998)DNEEDSKIELKLEK 202.76 6.349299999999998e-69 333634000.0 30782.800000000003 31382.6 36382.600000000006 34446.4 35352.7 46032.4 38880.3 46242.8 48336.2 48689.59999999999 46971.200000000004 True False 33907.84719490037 34027.321839244265 38851.74202234685 36574.075894549555 32869.64831219405 45657.5273963936 40359.91109261652 45320.45107722518 46304.797607663364 45615.330346580864 41194.04017496937 0.8231250698129802 0.8260253593654598 0.9431398779368632 0.8878487213005382 0.7979224220926635 1.1083527423497626 0.9797512193800382 1.1001700946236181 1.1240654573085411 1.107328393933499 1.0 15.330148007444173 -7.2639377243039815 24.990282590066247 1.0599567037701474 0.8606221263543307 0.7834697971759808 0.05594293100698821 92.55866314319155 925840.7325429049 0.00935358303155331 0.015383083413381491 5.4458073744729456e-08 7.2639377243039815 -0.19933457741581673 QNGSNDSDRYS(ph)DNEEGK ddPTM_A549_MK2206_60min_R1 7 QNGSNDSDRYSDNEEGK 17 1 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGS(0.003)NDS(0.015)DRY(0.05)S(0.932)DNEEGK;QNGS(0.002)NDS(0.01)DRY(0.003)S(0.985)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDS(0.001)DRY(0.001)S(0.997)DNEEGK;QNGS(0.003)NDS(0.016)DRY(0.009)S(0.972)DNEEGK 276.11 7.855799999999999e-116 795785600.0 37490.65000000001 34790.39000000001 33343.21 28670.11 46455.159999999996 40060.89000000001 35453.170000000006 44951.630000000005 49396.15 51528.53 51159.64 True False 43818.15516160989 36561.072249229655 38071.77855609119 35694.28823705016 39621.66750277834 44300.10678953343 41894.5520757343 51323.66121109333 38208.000894442666 39888.199284881666 38455.28945376595 1.13945716659581 0.9507423495846085 0.9900270963208884 0.9282023030918727 1.0303307572399034 1.1519899451750217 1.0894353591097865 1.334632034763352 0.9935694526595464 1.0372617096755565 1.0 15.230894431413363 -4.955493293880348 15.411511037511131 1.0291684496739804 1.674448822066109 0.019110467469429793 0.109580614950699 4354322.195946112 42660607.93936741 0.015506656491706147 80330599.19812298 1.1079156730236232e-05 4.955493293880348 0.6452803723921285 QNGSNDSDRYS(ph)DNEEGK ddPTM_A549_PD325901_60min_R1 6 QNGSNDSDRYSDNEEGK 17 1 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGSNDSDRYS(1)DNEEGK;QNGSNDS(0.002)DRYS(0.998)DNEEGK;QNGSNDS(0.019)DRYS(0.981)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDS(0.003)DRY(0.007)S(0.99)DNEEGK;QNGSNDS(0.007)DRY(0.002)S(0.991)DNEEGK 232.02 1.1042999999999999e-64 733803000.0 37217.4 37032.64 39263.3 31761.2 48631.700000000004 30418.499999999996 35595.51 36563.4 41923.200000000004 42842.1 38905.3 True False 40995.683049998195 40153.510538861396 41927.94364740315 33723.01718908121 45215.97716225711 30170.781821221524 36950.11661166048 35834.11430356759 40161.31369585515 40137.04249452145 34120.19474101655 1.2015078859065387 1.1768253623298368 1.2288307251951511 0.9883594582343376 1.3251969253241718 0.8842499889062074 1.0829397924637876 1.0502318224019602 1.1770540584745388 1.1763427143125864 1.0 15.058338260411311 -6.34729896464776 1.016943254075946 1.0763217267713823 1.2075430178972557 0.13789019579106188 0.11327785859526052 0.9277098278585508 1.6430955277033155 0.017242568256264662 0.08651651715479722 4.494703367927921e-07 6.34729896464776 0.13122129112587344 QNGSNDSDRYS(ph)DNEEGKK ddPTM_A549_MK2206_60min_R1 8 QNGSNDSDRYSDNEEGKK 18 2 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGSNDS(0.002)DRY(0.005)S(0.993)DNEEGKK;QNGSNDSDRYS(1)DNEEGKK;QNGSNDSDRYS(0.999)DNEEGKK;QNGSNDSDRYS(1)DNEEGKK;QNGSNDSDRYS(1)DNEEGKK;QNGSNDS(0.015)DRY(0.005)S(0.979)DNEEGKK;QNGSNDSDRYS(1)DNEEGKK;QNGS(0.002)NDS(0.09)DRY(0.001)S(0.906)DNEEGKK 196.1 3.4852999999999996e-49 207684000.0 17526.9 19937.280000000006 20182.230000000003 17837.17 25151.86 20961.17 19884.460000000003 22880.67 26507.210000000003 27779.380000000005 26192.639999999996 True False 20485.01222843617 20952.002392991897 23044.373691918103 22207.277450740985 21452.05471246748 23179.267096501455 23497.208993380733 26124.075041613098 20503.36925831628 21503.998764382704 19688.28460791139 1.0404670917955254 1.064186281854779 1.1704612235571872 1.1279437438555404 1.089584752540978 1.1773126789922201 1.1934614650957855 1.3268842645191952 1.0413994752024949 1.0922230754294207 1.0 14.265049797773813 -8.973329304366834 24.999746305162382 1.0182643561409557 1.148816840002311 0.2584272843591484 0.0760569445202601 135.40870518405924 126926.32646937417 0.013236606773842854 0.013809634814885055 1.063336436204145e-09 8.973329304366834 0.13055248386135543 QNGSNDSDRYS(ph)DNEEGKK ddPTM_A549_PD325901_60min_R1 4 QNGSNDSDRYSDNEEGKK 18 2 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGSNDS(0.002)DRYS(0.998)DNEEGKK;QNGSNDSDRYS(1)DNEEGKK;QNGSNDSDRYS(1)DNEEGKK;QNGSNDS(0.001)DRYS(0.998)DNEEGKK 202.66 1.5267999999999999e-49 250904000.0 19613.5 19204.5 19801.3 17194.0 21734.600000000002 16700.4 21256.899999999998 20381.000000000004 21201.100000000002 22339.0 20947.4 True False 21604.648081304447 20822.930613198616 21145.13529288991 18256.034329592774 20208.036676299496 16564.39747939998 22065.842961722014 19974.48496641481 20310.091495811233 20928.51172760242 18371.002596509206 1.1760189988438456 1.1334672946568152 1.1510060586953395 0.9937418621377649 1.0999963975912428 0.901659960711534 1.2011235013332853 1.0872833347816462 1.105551609887121 1.1392144559153883 1.0 14.165142743153933 -14.999999318627586 0.013017136895795572 4.975155259510897e-06 1.9582824689502512 0.0 0.08598360680796573 7744.383170105595 7.845782864346134 713.757554051125 486.9413848193562 1.000001568919195e-15 14.999999318627586 1.9582774937949916 QNGSNDSDRYS(ph)DNEEGKKK ddPTM_A549_MK2206_60min_R1 6 QNGSNDSDRYSDNEEGKKK 19 3 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGSNDS(0.002)DRYS(0.998)DNEEGKKK;QNGSNDSDRYS(1)DNEEGKKK;QNGSNDSDRYS(1)DNEEGKKK;QNGS(0.001)NDS(0.013)DRY(0.009)S(0.977)DNEEGKKK;QNGSNDS(0.002)DRYS(0.998)DNEEGKKK;QNGSNDSDRYS(1)DNEEGKKK 224.83 1.7574999999999996e-75 1964530000.0 21620.500000000004 23432.7 23257.2 19975.100000000002 28231.1 20102.1 21758.2 20206.8 32179.800000000003 35595.4 33461.2 True False 25269.51182952515 24625.324340845946 26555.42067589546 24869.00039671633 24078.342587512037 22229.29087930597 25711.38329729733 23071.175780729645 24891.126680581106 27554.374417921033 25151.860557860717 1.0046776369244645 0.9790657150073054 1.055803431114208 0.9887539070720561 0.9573185463604531 0.8838030422508304 1.0222457793191664 0.9172751148033542 0.9896336147109355 1.0955203236171511 1.0 14.618377503966602 -6.505382969602185 24.336242442618023 0.9800875710594424 1.0118552846585918 0.06340043062696343 0.05425723611471057 975.6486572349811 1357102.7143365843 0.005954813262485277 0.013557578398050375 3.1233239425859354e-07 6.505382969602185 0.031767713599149316 QNGSNDSDRYS(ph)DNEEGKKK ddPTM_A549_PD325901_60min_R1 3 QNGSNDSDRYSDNEEGKKK 19 3 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGSNDSDRYS(1)DNEEGKKK;QNGSNDSDRYS(1)DNEEGKKK;QNGSNDSDRYS(1)DNEEGKKK 206.69 5.4585e-56 2018650000.0 20369.3 20139.3 23096.4 19123.800000000003 24834.8 21267.9 24807.7 24994.8 25215.4 25247.7 25760.5 True False 22437.176340913873 21836.509489879503 24663.86059393587 20305.033692699002 23090.489323408863 21094.70127374977 25751.77059879432 24496.25910595872 24155.684426915534 23653.555913200566 22592.121809263946 0.9931416150435884 0.9665541676092326 1.0917018242979906 0.8987661213995792 1.0220593496419872 0.9337193492423472 1.1398562213946082 1.0842832431929426 1.0692083121210176 1.0469824885372818 1.0 14.463532151827629 -7.730916930216497 24.99985522748485 1.0455103376418853 0.9862231563135965 0.3133455481464955 0.05743737806465638 263.54775021866635 215861.95657964938 0.00900238160276246 0.013351751594435907 1.8581598410815147e-08 7.730916930216497 -0.05928718132828881 QNGSNDSDRYSDNEEDSKIELK ddPTM_A549_MK2206_60min_R1 1 QNGSNDSDRYSDNEEDSKIELK 22 2 P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 0 56.766000000000005 0.0015455 7286800.0 2256.5 2157.9 1905.0 2052.2 2810.6 2267.9 2331.2 2500.2 3527.4 3261.0 3603.1 False True 2637.3420338717174 2267.727892863883 2175.1576452703193 2554.989092126759 2397.1644631793074 2507.8876726898193 2754.7488644584355 2854.611006541374 2728.4495321003174 2524.3378351371384 2708.3508294988796 0.9737815371429185 0.8373095051660925 0.8031299422434073 0.9433744935472421 0.8851011608502912 0.9259833125658423 1.017131471467506 1.0540034088085837 1.0074210114814248 0.9320571794623118 1.0 11.403198916926211 -7.606811723905412 3.1681563619622395 1.0091799130460581 0.8847212679194928 0.5292823518895637 0.05094727246731753 0.12130067334302695 2.45592378836284 0.006911487173240038 0.01062308417906893 2.4727959234433436e-08 7.606811723905412 -0.12445864512656535 QNHDLT(ph)HRKSPSGPVK ddPTM_A549_PD325901_60min_R1 1 QNHDLTHRKSPSGPVK 16 2 Q9BVC5 Q9BVC5 C2orf49 Ashwin 1 QNHDLT(0.498)HRKS(0.498)PS(0.005)GPVK 62.966 0.0021631 3710000.0 849.29 811.42 870.68 981.74 1216.6 960.41 995.96 850.24 978.91 835.56 1178.5 True False 935.5092955857464 879.8012110787381 929.76958062417 1042.3798501066888 1131.150213042152 952.5887393829207 1033.861802810224 833.281296199623 937.7698169512234 782.8025990024387 1033.5519711270185 0.9051400623479405 0.8512404171793841 0.8995866744952545 1.0085413014790576 1.0944299315773247 0.9216650599042321 1.0002997736851758 0.8062306681017559 0.9073272009037425 0.7573906497888494 1.0 10.013395219726442 -7.193893062030339 0.007164704346297317 1.8679679401739755 1.5218427327766414e-05 0.0 0.09964975433539325 12259.802018496657 28.39330036259424 3614.44484577661 3787.840971056252 6.398923792015667e-08 7.193893062030339 -1.8679527217466478 QNHHQPPTQQQPPLPEREETGDEEDGS(ph)PIALHR ddPTM_A549_MK2206_60min_R1 1 QNHHQPPTQQQPPLPEREETGDEEDGSPIALHR 33 1 P79522-2 P79522-2 PRR3 Proline-rich protein 3 1 QNHHQPPTQQQPPLPEREETGDEEDGS(1)PIALHR 133.13 4.9383e-29 10910000.0 451.11 495.88 578.17 539.45 708.96 684.9 414.61 613.53 954.2 650.49 714.13 True False 527.2463394193974 521.1181739252711 660.163199877134 671.615274216831 604.6729231536328 757.3756634001752 489.93927020123186 700.4997563568234 738.0752235442882 503.54385721507435 536.7918120146644 0.9822175517926748 0.97080127204145 1.2298309793501458 1.2511652733601746 1.1264570539632486 1.410929985235104 0.9127174804742503 1.3049747419353086 1.3749748170974803 0.938061732583429 1.0 9.068218855247375 -5.7560231354842 24.904046718474177 1.1910669654324095 0.976509301116976 0.17370650656833742 0.16025195372413026 148.4083817652902 682362.2961347633 0.022404811823006014 0.08197809208201005 1.7537870726236737e-06 5.7560231354842 -0.21455766431543355 QNHHQPPTQQQPPLPEREETGDEEDGS(ph)PIALHR ddPTM_A549_PD325901_60min_R1 1 QNHHQPPTQQQPPLPEREETGDEEDGSPIALHR 33 1 P79522-2 P79522-2 PRR3 Proline-rich protein 3 1 QNHHQPPTQQQPPLPEREET(0.005)GDEEDGS(0.995)PIALHR 112.74 1.5706e-14 21002000.0 2040.8 2237.9 1766.3 1784.2 2172.7 2176.1 1678.8 1754.7 2200.1 2173.6 2283.9 True False 2247.980513642444 2426.495686910734 1886.1717396247448 1894.4059817878 2020.0970474080898 2158.378563083656 1742.6876526746087 1719.7011319644787 2107.637448053841 2036.3585250511032 2002.9947788349566 1.122309722120186 1.2114338552205848 0.9416758144131748 0.9457867797786685 1.0085383490530517 1.0775757310456289 0.8700410360970807 0.8585649598970718 1.0522431063348803 1.0166569311955733 1.0 10.967942945174299 -5.759280898074517 24.99944068194014 0.9967905110503257 1.166871820980193 0.5051512147000741 0.07066345605467227 37.833977366159736 438159.5310625559 0.010387758526858812 0.03665265793418588 1.7406806513845431e-06 5.759280898074517 0.17008130992986725 QNHLQADNFY(ph)QTV ddPTM_A549_MK2206_60min_R1 1 QNHLQADNFYQTV 13 0 Q9NZV1 Q9NZV1 CRIM1 Cysteine-rich motor neuron 1 protein;Processed cysteine-rich motor neuron 1 protein 1 QNHLQADNFY(0.992)QT(0.008)V 81.017 4.8343000000000005e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QNHLQADNFYQT(ph)V ddPTM_A549_MK2206_60min_R1 3 QNHLQADNFYQTV 13 0 Q9NZV1 Q9NZV1 CRIM1 Cysteine-rich motor neuron 1 protein;Processed cysteine-rich motor neuron 1 protein 1 QNHLQADNFYQT(1)V;QNHLQADNFYQT(1)V;QNHLQADNFY(0.368)QT(0.632)V 126.83 5.3161e-07 13039700.0 2106.7 2390.0 2242.5 1751.48 2922.8 2735.8 2209.28 1931.57 3584.3 3574.5 3152.5 True False 2462.259456130089 2511.6407914846286 2560.5202202197856 2180.592678626924 2492.8599918097475 3025.300540122935 2610.6775786164762 2205.3759626850356 2772.4617729509464 2767.0179674019323 2369.6472454262243 1.0390826992847226 1.059921807489479 1.0805491092237356 0.9202182657506497 1.0519962397868892 1.2766881424913434 1.1017157020545891 0.9306769043121261 1.1699892371331702 1.1676919308317697 1.0 11.210456594776328 -7.004986064383403 24.985860663958544 1.0869625085435584 1.0257500695850343 0.12864028496684754 0.09395220313499787 491.74883726042964 2464246.3406893495 0.014555865534207067 0.02696573698489425 9.8858481580126e-08 7.004986064383403 -0.06121243895852402 QNHLQADNFYQT(ph)V ddPTM_A549_PD325901_60min_R1 2 QNHLQADNFYQTV 13 0 Q9NZV1 Q9NZV1 CRIM1 Cysteine-rich motor neuron 1 protein;Processed cysteine-rich motor neuron 1 protein 1 QNHLQADNFYQT(1)V;QNHLQADNFYQT(1)V 156.02 2.4746e-18 38929000.0 7279.3 7171.6 7566.7 7447.4 9179.8 6597.799999999999 7736.0 8273.4 8405.2 8447.2 8713.7 True False 8018.289177262573 7775.975900732388 8080.221764263462 7907.408983727425 8535.042516590782 6544.069704293617 8030.397713301632 8108.380546643255 8051.958673870347 7913.842350391826 7641.970140695374 1.0492437198312523 1.0175354990362238 1.0573479895235773 1.0347343470525387 1.1168641540667081 0.8563328021192904 1.0508281981550525 1.0610327438292557 1.0536495858563597 1.035576193663551 1.0 12.899728905357398 -11.041284286143354 1.3772840979051049 1.0002269862964732 1.0345042480983777 0.0 0.06182031614947203 1.2940062747561292 4.422692686495811 0.040245719837051754 0.009269149579703227 9.093178446435453e-12 11.041284286143354 0.03427726180190449 QNHT(ph)PRK ddPTM_A549_MK2206_60min_R1 2 QNHTPRK 7 1 Q15233;C9IZL7;C9JYS8;C9JJ13;C9J4X2 Q15233 NONO Non-POU domain-containing octamer-binding protein 1 QNHT(1)PRK;QNHT(1)PRK 80.438 0.0097985 46231000.0 6811.0 5144.2 3761.8 2052.48 9284.9 14318.2 12996.1 15610.0 8909.7 7929.2 6908.3 True False 7960.530287037569 5406.017807345284 4295.279805762668 2555.3376921393287 7919.103509632655 15833.342420348057 15357.323145756804 17822.765303620065 6891.667175867269 6137.988212931432 5192.778450619502 1.5330001776000808 1.0410645974507815 0.8271640792320416 0.49209449554592016 1.5250224104376917 3.049108020092621 2.9574385450480105 3.432221396137899 1.3271637219656633 1.1820238955503994 1.0 12.342290958959177 -6.92867893419566 9.778686995536944 1.643207118387346 0.9707880460632407 0.1800605717823094 0.8634773633624313 0.7746417497541837 100.23105604610289 0.15228894162988557 0.28809275452026195 1.1784768775188191e-07 6.92867893419566 -0.6724190723241054 QNLLAPQNAVS(ph)SEETNDFKQETLPSK ddPTM_A549_MK2206_60min_R1 3 QNLLAPQNAVSSEETNDFKQETLPSK 26 1 P10451-4;P10451 P10451-4 SPP1 Osteopontin 1 QNLLAPQNAVS(0.66)S(0.149)EET(0.15)NDFKQET(0.034)LPS(0.008)K;QNLLAPQNAVS(0.455)S(0.455)EET(0.082)NDFKQET(0.006)LPS(0.002)K;QNLLAPQNAVS(0.327)S(0.327)EET(0.327)NDFKQET(0.018)LPS(0.001)K 49.25 0.002739 5091100.0 1137.98 1426.96 1590.58 1612.42 2337.1 1490.67 2069.08 1726.37 2170.2 2523.3999999999996 2434.0 True False 1330.0432030601983 1499.5861689610472 1816.1481613722115 2007.4629723842838 1993.315685937649 1648.4117099733376 2445.0050533946714 1971.0882342863913 1678.6531650972702 1953.3621874225885 1829.570625017424 0.726970134343697 0.819638306636436 0.9926635990643518 1.0972317465827075 1.0894991746594453 0.9009828248404671 1.3363818919924921 1.0773501756826795 0.9175120884340191 1.0676615380201493 1.0 10.837289392274474 -5.662414587483294 3.0731389471575885 1.008935708763154 0.7414791802857691 0.432912437027017 0.11685114680951666 0.20698604893262354 3.7174189929177754 0.0171261780523588 0.08632030150104586 2.1756318725701417e-06 5.662414587483294 -0.267456528477385 QNLLAPQNAVS(ph)SEETNDFKQETLPSK ddPTM_A549_PD325901_60min_R1 3 QNLLAPQNAVSSEETNDFKQETLPSK 26 1 P10451-4;P10451 P10451-4 SPP1 Osteopontin 1 QNLLAPQNAVS(0.825)S(0.169)EET(0.006)NDFKQETLPSK;QNLLAPQNAVS(0.543)S(0.43)EET(0.027)NDFKQETLPSK;QNLLAPQNAVS(0.499)S(0.499)EET(0.003)NDFKQETLPSK 123.45 4.9621e-18 19925200.0 3697.0 4684.2 4735.1 4489.4 6301.200000000001 4683.1 4254.799999999999 5578.0 5755.400000000001 5030.5 4925.4 True False 4072.3167184124472 5078.953973201331 5056.452360469416 4766.700041832836 5858.625449959895 4644.962386276857 4416.718742315897 5466.742414143652 5513.520552942636 4712.873371489497 4319.607024683088 0.9427516658673868 1.1757907476719953 1.1705815671601256 1.103503169291783 1.356286675265262 1.0753205927610137 1.0224816093403621 1.2655647569108963 1.276394014880819 1.0910421583628342 1.0 12.076684354150622 -5.256479049518109 23.76270094057621 1.1480846571864656 0.942751496465831 0.24584236069468357 0.10579905708886825 343.8156855678311 1646948.611033532 0.016842499044091665 0.18865915943093486 5.540142690903995e-06 5.256479049518109 -0.20533316072063457 QNLNVDKDTTLPAS(ph)AR ddPTM_A549_MK2206_60min_R1 2 QNLNVDKDTTLPASAR 16 1 O75330-2;O75330;O75330-3 O75330-2 HMMR Hyaluronan mediated motility receptor 1 QNLNVDKDT(0.001)T(0.025)LPAS(0.974)AR;QNLNVDKDT(0.015)T(0.013)LPAS(0.972)AR 98.26899999999999 8.8164e-07 18651000.0 6299.0 7205.2 6852.0 6349.1 8392.7 6912.5 7203.2 7396.9 10684.4 10638.3 10825.0 True False 7362.117204235743 7571.913904102525 7823.716632751825 7904.629785021931 7158.144947742467 7643.976161853858 8511.928200268963 8445.433227056199 8264.400459480816 8235.10064137977 8136.853745198688 0.9047867191394348 0.9305702352792666 0.9615161925908235 0.9714602268335245 0.8797190132569696 0.9394265156067648 1.046095759714447 1.037923685434262 1.0156751882577943 1.0120743102011702 1.0 12.990255344062195 -7.691485129015311 7.627039016963812 1.0129576964214764 0.9316707656329846 0.7393512022844904 0.026684118158342554 0.10840780471658511 10.174910130304283 0.004244455753156835 0.00629491527120545 2.034767868584163e-08 7.691485129015311 -0.0812869307884918 QNLNVDKDTTLPAS(ph)AR ddPTM_A549_PD325901_60min_R1 2 QNLNVDKDTTLPASAR 16 1 O75330-2;O75330;O75330-3 O75330-2 HMMR Hyaluronan mediated motility receptor 1 QNLNVDKDT(0.068)T(0.068)LPAS(0.863)AR;QNLNVDKDT(0.011)T(0.144)LPAS(0.845)AR 80.98 7.3662e-05 28632000.0 10322.2 11880.1 11932.5 12859.3 13122.4 10891.5 14431.1 13488.5 15793.3 17693.2 16354.9 True False 11370.102145197981 12881.277720214573 12742.311205951577 13653.589755410741 12200.727893822397 10802.803235065316 14980.28340750093 13219.46128597645 15129.562523680173 16576.048332459603 14343.3509822531 0.7927089115553337 0.8980661308610842 0.8883775640516309 0.9519107335729431 0.8506190714372289 0.7531575604913753 1.0444061102622324 0.9216438545171746 1.054813658426113 1.155660790352896 1.0 13.80809449429416 -7.782560262490665 24.999987293003805 1.0183281890612572 0.8633405933687728 0.5994555414320375 0.07231475986030586 118.84178474516739 140668.07372132764 0.00937001967600178 0.012953428035963934 1.6498320555443754e-08 7.782560262490665 -0.15498759569248444 QNLNVDKDTTLPAS(ph)ARK ddPTM_A549_MK2206_60min_R1 2 QNLNVDKDTTLPASARK 17 2 O75330-2;O75330;O75330-3 O75330-2 HMMR Hyaluronan mediated motility receptor 1 QNLNVDKDT(0.025)T(0.025)LPAS(0.95)ARK;QNLNVDKDT(0.005)T(0.005)LPAS(0.99)ARK 63.69 0.00058766 18460800.0 2646.8 3155.7 2621.3 2612.3 3698.3 3074.3 2617.7 2668.8 4047.5 4053.5 4808.3 True False 3093.515131952874 3316.3116509154966 2993.0397561926943 3252.3136172706018 3154.2849691083857 3399.6203854448195 3093.3022059423665 3047.1105728572193 3130.7477125293517 3137.811534721985 3614.2664076710275 0.8559178497155342 0.9175614846423211 0.8281181901367805 0.8998544242250084 0.872731728467397 0.9406114552677587 0.8558589370659144 0.843078575057428 0.866219409251227 0.868173836898741 1.0 11.819487135873027 -10.65953200545434 0.8511814270487436 1.0028169244896297 0.8762430871781469 0.0 0.04948955290914861 0.2876152152759341 0.3586370670488458 0.023313971937615943 0.005712305915065043 2.1901204205789092e-11 10.65953200545434 -0.12657383731148275 QNLNVDKDTTLPAS(ph)ARK ddPTM_A549_PD325901_60min_R1 2 QNLNVDKDTTLPASARK 17 2 O75330-2;O75330;O75330-3 O75330-2 HMMR Hyaluronan mediated motility receptor 1 QNLNVDKDT(0.001)T(0.001)LPAS(0.998)ARK;QNLNVDKDTTLPAS(1)ARK 116.21 2.9748e-10 30607000.0 3792.5 3686.7 4567.0 3701.6000000000004 5280.6 4147.1 4066.2999999999997 5012.1 4992.200000000001 4556.799999999999 5067.9 True False 4177.511808109063 3997.3911474747742 4876.944083601997 3930.23942505645 4909.7088730810365 4113.327392566621 4221.0452716647405 4912.129733583614 4782.395194843143 4269.082870331646 4444.580428065012 0.9399113989996533 0.8993854903003914 1.097278846121639 0.8842768150260507 1.1046506982029174 0.9254703473455638 0.9497061286170516 1.10519537515089 1.076005997021681 0.9605142576281895 1.0 12.117831518583255 -8.238366578630037 24.52009015407179 1.0420923567705502 0.9735808205743233 0.1381818714643399 0.07600107628362718 827.5188755183741 879427.8557820378 0.011170164843897955 0.01441650179745645 5.776082948472454e-09 8.238366578630037 -0.06851153619622696 QNLWFANPGGS(ph)NSMPSQSR ddPTM_A549_MK2206_60min_R1 3 QNLWFANPGGSNSMPSQSR 19 0 M0QZ22;Q5PRF9;M0QX45 M0QZ22 SAMD4B Protein Smaug homolog 2 1 QNLWFANPGGS(0.49)NS(0.49)MPS(0.009)QS(0.012)R;QNLWFANPGGS(0.466)NS(0.466)MPS(0.025)QS(0.043)R;QNLWFANPGGS(0.515)NS(0.365)MPS(0.052)QS(0.068)R 92.211 4.2246e-06 6168660.0 2088.22 1747.3899999999999 2028.67 1912.5 3000.74 2254.86 2526.73 2359.6400000000003 3564.9 3142.7 3773.9 True False 2440.6604839227125 1836.3246872938598 2316.3659108821726 2381.0625858553876 2559.3351210562405 2493.46778854507 2985.8041344771177 2694.126196094428 2757.4558419755112 2432.7618873000592 2836.7364756586912 0.8603761769432567 0.6473370730946958 0.8165601319538544 0.8393668591660436 0.902211094691819 0.8789916899017156 1.05254899779995 0.9497273430972649 0.972052168270311 0.8575917813215875 1.0 11.470016419441137 -6.8537484351817985 0.9277875258408849 0.9874129849634649 0.7521345058740575 0.5324761065737315 0.07077247085308933 0.21433500812158474 0.3500800219714269 0.008880006059684838 0.02876729545307097 1.4003982675369207e-07 6.8537484351817985 -0.23527847908940736 QNLWFANPGGSNS(ph)MPSQSR ddPTM_A549_PD325901_60min_R1 1 QNLWFANPGGSNSMPSQSR 19 0 M0QZ22;Q5PRF9;M0QX45 M0QZ22 SAMD4B Protein Smaug homolog 2 1 QNLWFANPGGS(0.016)NS(0.685)MPS(0.122)QS(0.178)R 70.41199999999999 0.00038108 3126300.0 1109.0 961.63 1247.2 981.05 1351.2 850.94 895.17 1272.0 1160.2 994.26 1305.1 True False 1221.5848635973493 1042.6699349407786 1331.8424920228615 1041.6472303737924 1256.2963733869437 844.0102267682576 929.2361842058201 1246.6289621353035 1111.4408287041815 931.4822539185272 1144.5809737105396 1.0672769263647428 0.9109621415080992 1.163607051500473 0.9100686227527849 1.0976037538997714 0.7373966946454805 0.8118570949099321 1.0891575089649983 0.9710460458739557 0.8138194459923774 1.0 10.160603815042183 -5.225716451846732 21.48981323975713 0.9757887291316046 1.0672781483898262 0.031996955102512326 0.12864178474551805 6330.458888643509 3807755.792211639 0.015186096134292967 2.961320627034431 5.946802949442227e-06 5.225716451846732 0.09148941925822152 QNLWFANPGGSNSMPSQS(ph)R ddPTM_A549_PD325901_60min_R1 1 QNLWFANPGGSNSMPSQSR 19 0 M0QZ22;Q5PRF9;M0QX45 M0QZ22 SAMD4B Protein Smaug homolog 2 1 QNLWFANPGGS(0.22)NS(0.182)MPS(0.268)QS(0.329)R 53.777 0.004027 2379000.0 1479.7 1298.7 1583.6 1373.6 1338.2 1605.3 1020.8 1092.9 1546.2 1509.3 1606.7 True False 1629.9180547024334 1408.1460067880466 1691.0726189603943 1458.444152328058 1244.2094485393786 1592.226969035518 1059.6471026031938 1071.1012521365365 1481.2185910553387 1414.0025404212513 1409.0860857104633 1.1567199983247485 0.9993328449326482 1.2001201602297797 1.0350284252453663 0.8829903730913973 1.1299713943543164 0.7520101953663947 0.7601389744732917 1.0511909854737556 1.0034891088349007 1.0 10.460544037994339 -6.516955780397706 24.736003655655047 0.9825353671168452 1.108583380692613 0.255360533623623 0.12148253162462411 319.06234873785627 1332492.7871430162 0.017971476825342517 0.03839674528290105 3.0411946625193753e-07 6.516955780397706 0.1260480135757679 QNPEQS(ph)ADEDAEK ddPTM_A549_MK2206_60min_R1 2 QNPEQSADEDAEK 13 0 Q99613-2;Q99613;B5ME19;H3BPE3 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QNPEQS(1)ADEDAEK;QNPEQS(1)ADEDAEK 230.97 1.6411e-46 75377000.0 3773.8 3563.1 3670.5 3150.4 4794.6 3951.5 3994.3999999999996 4355.5 5448.9 4722.799999999999 4267.1 True False 4410.725179448298 3744.4465707694035 4191.0320928948595 3922.2481414268295 4089.3206913682166 4369.6451072065865 4720.130775648921 4972.905463159331 4214.732850105295 3655.916199872945 3207.4613040311624 1.3751452508265227 1.1674175355017857 1.3066508667236414 1.2228512738399424 1.274939992644253 1.3623375913264433 1.4716095778666525 1.5504179136656597 1.3140401241343695 1.1398161515707643 1.0 11.647216144889251 -10.370457807412922 0.9221797397368767 1.0152310466690464 1.3337829076171477 0.4606485966709597 0.10860366562531985 0.31141066296675857 0.507738896710074 0.05838678963266818 0.021354920749459147 4.261300809708542e-11 10.370457807412922 0.3185518609481013 QNPEQS(ph)ADEDAEK ddPTM_A549_PD325901_60min_R1 2 QNPEQSADEDAEK 13 0 Q99613-2;Q99613;B5ME19;H3BPE3 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QNPEQS(1)ADEDAEK;QNPEQS(1)ADEDAEK 218.63 5.602000000000001e-38 70447000.0 5107.2 4757.7 5093.5 4756.4 4712.9 3964.3 4522.9 4010.1000000000004 4309.4 4379.2 4324.3 True False 5625.679184278074 5158.6480761496005 5439.175539703695 5050.19202543184 4381.882162622355 3932.016055159477 4695.021434525848 3930.1154096374103 4128.2909043421805 4102.69656464105 3792.4385139962383 1.4833936433026251 1.3602456723058998 1.4342158797380808 1.3316477002313372 1.155426026407742 1.0368041671995787 1.2379953998459223 1.0363030000705526 1.0885584272774516 1.081809645561763 1.0 11.888910075214346 -6.463347382387353 0.49413749978939986 1.03235045883408 1.554614724479437 0.8305025026917303 0.06812953110073257 0.4678820750902969 0.14993155447033782 0.014987607212115417 0.11536423429949617 3.4407460312816255e-07 6.463347382387353 0.5222642656453571 QNPQS(ph)PPQDSSVTSK ddPTM_A549_MK2206_60min_R1 2 QNPQSPPQDSSVTSK 15 0 C9JEF4;C9J172;Q9BRX7;A0A2R8YCS4;E7EP63;E7ER52;A6NDI8;Q9UBN7 C9JEF4 HDAC6 Histone deacetylase 6 1 QNPQS(0.976)PPQDS(0.018)S(0.005)VT(0.001)SK;QNPQS(1)PPQDSSVTSK 148.57 8.2312e-14 28211000.0 2631.5 2623.7 2399.5 2286.08 4012.2 2800.0 2712.6 3076.8 3303.8999999999996 4399.4 3740.5 True False 3075.6328660019617 2757.2351232712217 2739.7851810110906 2846.16970262603 3422.0106949292 3096.294141510425 3205.4443075368695 3512.9458223048146 2555.571925244157 3405.5724844840006 2811.6306174517963 1.0938964908517865 0.9806533995458216 0.9744470571650625 1.012284360882916 1.217091133411613 1.1012449936672768 1.1400659416783523 1.2494336206541334 0.9089287580600799 1.2112446291293053 1.0 11.457191355112837 -8.801853635833801 24.999999085452348 0.9569941150932839 1.091104948440866 0.0 0.1145238479023248 135.03724432887736 83532.57188623257 0.016136396672867783 0.017178598494575186 1.5781430394581911e-09 8.801853635833801 0.134110833347582 QNPQS(ph)PPQDSSVTSK ddPTM_A549_PD325901_60min_R1 2 QNPQSPPQDSSVTSK 15 0 C9JEF4;C9J172;Q9BRX7;A0A2R8YCS4;E7EP63;E7ER52;A6NDI8;Q9UBN7 C9JEF4 HDAC6 Histone deacetylase 6 1 QNPQS(1)PPQDSSVTSK;QNPQS(1)PPQDSSVTSK 191.44 7.891699999999999e-34 31804000.0 5616.8 6349.3 6135.9 5114.299999999999 7489.9 5734.700000000001 6104.799999999999 6752.4 7062.7 7105.9 6736.9 True False 6187.01340113038 6884.377793870284 6552.319072164107 5430.198695581969 6963.835262752269 5687.998504533726 6337.1215046747375 6617.718084844675 6765.879280200843 6657.232261299518 5908.304008727712 1.0471724867222403 1.1652037172936127 1.1090016800904388 0.9190790940277466 1.178652156772118 0.9627125645754598 1.0725787798518116 1.1200706793470716 1.1451474518248088 1.1267585844373433 1.0 12.52852834580201 -11.101364507245826 1.465143582993899 1.0003745170565845 1.0877018133225391 0.0 0.08528506318498945 0.6294775333334064 2.432580084771399 0.05274144867755826 0.01171254141141402 7.918364560770439e-12 11.101364507245826 0.08732729626595459 QNPSLPAPQTLAGGNPETAQPHAGT(ph)LPRPR ddPTM_A549_MK2206_60min_R1 1 QNPSLPAPQTLAGGNPETAQPHAGTLPRPR 30 1 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7;I3L460;I3L3P1;I3L4Y5;Q68EM7-2 Q68EM7-3;Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 QNPSLPAPQTLAGGNPET(0.072)AQPHAGT(0.928)LPRPR 95.78399999999999 9.226799999999999e-10 7243200.0 1355.7 1532.7 1338.7 1522.7 1975.5 1500.7 1182.2 1537.8 1908.7 2205.3 2405.3 True False 1584.5090163172551 1610.7078833089922 1528.5477898810373 1895.7615683566014 1684.9065669290255 1659.5030779159617 1396.9904373553375 1755.7878593149844 1476.3824975675775 1707.1211983526314 1807.9976270971274 0.8763888804772938 0.8908794232739684 0.8454368340821512 1.0485420666178558 0.9319185720582313 0.9178679512873119 0.7726727161684984 0.9711228781500285 0.8165843115281173 0.9442054418475867 1.0 10.820177068954207 -11.10106059642745 1.449728208138768 0.9997887049578622 0.8888713741481767 0.11647475397836404 0.07280258652248406 0.4880144626614765 1.8392145657641665 0.05175299984007732 0.01137239721483286 7.923907617275545e-12 11.10106059642745 -0.11091733080968547 QNPSLPAPQTLAGGNPETAQPHAGT(ph)LPRPR ddPTM_A549_PD325901_60min_R1 2 QNPSLPAPQTLAGGNPETAQPHAGTLPRPR 30 1 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7;I3L460;I3L3P1;I3L4Y5;Q68EM7-2 Q68EM7-3;Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 QNPSLPAPQTLAGGNPET(0.001)AQPHAGT(0.999)LPRPR;QNPSLPAPQTLAGGNPET(0.022)AQPHAGT(0.978)LPRPR 147.49 3.3365e-36 27093000.0 3957.4 4544.4 4458.299999999999 4817.2 5218.799999999999 5042.9 4728.6 5414.5 5023.3 5357.3 5225.8 True False 4359.152334716097 4927.372536573189 4760.867047935798 5114.747503345023 4852.249491882606 5001.832294368167 4908.549460589208 5306.503549906919 4812.188169996301 5019.0391637174625 4583.059729075582 0.9511445611456939 1.075127279121683 1.0387966400987927 1.1160115306585112 1.0587358181476985 1.0913740143153343 1.071020181004553 1.1578517112141713 1.049994644291257 1.0951284644788644 1.0 12.162095372530024 -9.80167336176708 1.2100205839798541 1.0092475525933213 1.0707364955452034 0.0 0.05519621483816014 0.4401474435021713 1.3070142809933065 0.013641125718442797 0.00892685258235894 1.578798256898705e-10 9.80167336176708 0.06148894295188212 QNPSRCS(ph)VSLSNVEAR ddPTM_A549_MK2206_60min_R1 1 QNPSRCSVSLSNVEAR 16 1 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 QNPS(0.035)RCS(0.959)VS(0.005)LS(0.001)NVEAR 70.453 0.00039081 7925500.0 1185.4 1251.0 1066.6 962.7 1966.1 1590.7 1143.7 1153.3 2239.5 2170.7 2155.4 True False 1385.4665397525075 1314.6705565469756 1217.8599183440003 1198.561543217245 1676.8892944769216 1759.0268181787972 1351.4954857074083 1316.7838068331203 1732.2568257466294 1680.3373623833752 1620.1546939862578 0.8551446012501934 0.8114475496857256 0.7516936023853104 0.7397821625713298 1.0350180144533438 1.085715348483703 0.8341768170187283 0.8127519006183797 1.0691922395907476 1.0371462482073504 1.0 10.661915854310225 -7.031497770419649 0.5331027836534352 1.023920296552744 0.769108793601679 0.32681632221500667 0.10438068048965117 0.89926456343788 0.43859923820312957 0.025638351488649673 0.10318905108466625 9.300412893862622e-08 7.031497770419649 -0.254811502951065 QNPSRCS(ph)VSLSNVEAR ddPTM_A549_PD325901_60min_R1 2 QNPSRCSVSLSNVEAR 16 1 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 QNPS(0.059)RCS(0.936)VS(0.005)LSNVEAR;QNPS(0.065)RCS(0.929)VS(0.005)LS(0.001)NVEAR 64.87 0.0008261000000000001 24362000.0 7220.5 7915.0 7621.0 7765.799999999999 7439.799999999999 7623.8 7561.7 8260.6 8039.8 8498.099999999999 9673.0 True False 7953.519844548837 8582.024827694919 8138.206888795891 8245.475828588555 6917.254113916655 7561.714300462835 7849.464631421006 8095.835852684665 7701.915165157625 7961.528515705179 8483.282322199104 0.9375521811570526 1.0116396580645943 0.9593228870268508 0.9719676317988079 0.8153983153213636 0.8913665740765572 0.9252862669535917 0.9543282358409119 0.9078932979753848 0.9384962345142521 1.0 13.050406860033195 QNRVDS(ph)KETEC ddPTM_A549_MK2206_60min_R1 2 QNRVDSKETEC 11 2 P78536 P78536 ADAM17 Disintegrin and metalloproteinase domain-containing protein 17 1 QNRVDS(0.998)KET(0.002)EC;QNRVDS(0.997)KET(0.003)EC 50.843 0.0084471 25731000.0 5459.4 5888.8 4704.3 4039.2 5488.7 4126.3 3742.0 3512.7 5057.1 5766.1 6237.299999999999 True False 6380.813250484937 6188.514766901538 5371.440478028952 5028.804181326575 4681.319500836926 4562.942327183736 4421.872962767442 4010.635982192577 3911.674924529259 4463.534005269628 4688.406269277394 1.3609770322801797 1.3199612856620784 1.1456857980135822 1.0726041841296414 0.9984884483055773 0.9732395328203937 0.9431505524048726 0.8554369548718143 0.8343293434619842 0.9520365234810539 1.0 12.194881875172266 -5.996038369173569 0.7843913348396212 0.9165570658228102 1.4471173715222834 0.9218441365734802 0.04577241680639771 0.30311190768818086 0.2354247065632112 0.010660249000022309 0.11231647613401724 1.0091637242516646e-06 5.996038369173569 0.5305603056994732 QNS(ph)DPTSEGPGPSPNPPAWVRPDNEAPPKVPQR ddPTM_A549_PD325901_60min_R1 1 QNSDPTSEGPGPSPNPPAWVRPDNEAPPKVPQR 33 2 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 QNS(0.852)DPT(0.066)S(0.082)EGPGPSPNPPAWVRPDNEAPPKVPQR 99.725 6.1978e-11 11969000.0 1826.6 1753.8 1890.2 2116.8 2074.3 2218.0 1847.0 1957.3 2234.3 2225.5 2401.6 True False 2012.0350873281502 1901.5988809616342 2018.4803386959688 2247.549928398394 1928.60832394652 2199.9373433755554 1917.288595717182 1918.2601160278548 2140.400140987547 2084.9815501937933 2106.21842499673 0.9552832049369591 0.9028497986691891 0.958343310807901 1.0671020164501142 0.9156734653242407 1.0444962959522923 0.9102990330740074 0.9107602959226953 1.0162289511786367 0.9899170596216916 1.0 11.0404393432096 -2.000000054824851 0.12933838030933065 1.0206465840608734 0.7503405881830086 0.026018882234846386 0.05429913630900492 118.16155453755616 0.994775180588885 0.1527428751605897 5.8614647143818415 0.009999998737611236 2.000000054824851 -0.27030599587786475 QNS(ph)PAGNKENIKPNET(ph)SPSFSK ddPTM_A549_MK2206_60min_R1 2 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 2 QNS(0.995)PAGNKENIKPNET(0.517)S(0.47)PS(0.017)FS(0.001)K;QNS(0.999)PAGNKENIKPNET(0.427)S(0.312)PS(0.254)FS(0.008)K 77.52199999999999 7.591399999999999e-05 106566000.0 4432.9 4388.7 4191.799999999999 4507.3 7088.6 4575.1 4717.6 4518.6 7212.700000000001 6208.5 6973.4 True False 5181.065146000417 4612.066084346687 4786.260271624207 5611.588702340383 6045.876330211641 5059.234045294406 5574.7268543964965 5159.125387632132 5579.03496631512 4805.995538009486 5241.712323950905 0.9884298919508855 0.8798777573642907 0.9131100632429588 1.070564036240487 1.1534162801316428 0.9651872770997557 1.0635316304795956 0.984244282933764 1.0643535206659263 0.9168751051158412 1.0 12.355822462403575 -6.253664854140939 24.827711473845238 1.036349524505135 0.9224130797472235 0.3148371622275856 0.06468582617620386 360.69065995196615 1151850.9824705548 0.007398899351793425 0.019193340436545758 5.576158961615797e-07 6.253664854140939 -0.11393644475791154 QNS(ph)PAGNKENIKPNET(ph)SPSFSK ddPTM_A549_PD325901_60min_R1 1 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 2 QNS(1)PAGNKENIKPNET(0.574)S(0.414)PS(0.01)FS(0.002)K 84.035 2.3394e-05 75735000.0 4276.7 4848.0 4262.9 3446.9 5249.7 3664.0 4889.6 4240.3 4608.7 4698.2 4168.7 True False 4710.86743565986 5256.557974057482 4552.20602890014 3659.807184522121 4880.9791824818185 3634.1615987953273 5075.676403691785 4155.723890049003 4415.012366185967 4401.554850200169 3655.9763275665673 1.2885388234434858 1.43779868989367 1.2451410023024156 1.0010478341795237 1.3350685959530317 0.9940331318321856 1.3883231041241932 1.136693325587004 1.2076151404198552 1.2039341767647227 1.0 11.836041013643166 -14.999999999999993 0.11768504607183346 0.25919394132967416 1.3464523475426124 0.08569203879935938 0.1430191873785737 73.98421618246869 0.6088349193738897 13.157999735322623 0.5135284974502327 1.0000000000000164e-15 14.999999999999993 1.0872584062129382 QNS(ph)PAGNKENIKPNETS(ph)PSFSK ddPTM_A549_MK2206_60min_R1 1 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 2 QNS(0.999)PAGNKENIKPNET(0.2)S(0.776)PS(0.023)FS(0.002)K 74.404 0.00016929 5770100.0 1232.3 1446.2 1506.0 1090.2 1611.4 1517.0 1350.8 1171.0 2007.2 1872.1 2154.2 True False 1440.2821131575977 1519.8054027803641 1719.573445552283 1357.2990489409385 1374.3651946086723 1677.5279330968974 1596.2228749615886 1336.9928360370975 1552.5724048397567 1449.1913097700817 1619.2526871045736 0.8894733506559759 0.9385844562024265 1.0619549741968286 0.8382255961346954 0.8487651158796031 1.0359889759371201 0.9857775056812379 0.8256851118325503 0.958820335580823 0.8949753928532409 1.0 10.661112422857743 -9.514558812273213 1.5989902464585457 0.9891403369575938 0.9322546829402102 0.0 0.07926720110001365 0.5950679676241547 3.092792569015903 0.01722022862834606 0.013809583006035771 3.05802609976877e-10 9.514558812273213 -0.05688565401738366 QNS(ph)PAGNKENIKPNETS(ph)PSFSK ddPTM_A549_PD325901_60min_R1 2 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 2 QNS(1)PAGNKENIKPNET(0.186)S(0.7)PS(0.105)FS(0.009)K;QNS(1)PAGNKENIKPNET(0.219)S(0.655)PS(0.119)FS(0.007)K 85.19 2.3583e-05 18941800.0 4934.4 5309.5 4825.4 3987.9 5896.0 4896.4 5597.0 5125.5 5420.5 5679.5 4808.0 True False 5435.33665548671 5756.950198691868 5152.8806614874275 4234.223525821976 5481.885300095782 4856.525341796247 5809.996897795919 5023.267881623038 5192.695235296511 5320.895400730467 4216.64648042317 1.2890188164271328 1.3652911680929243 1.2220328845235087 1.004168489220145 1.300058073529948 1.1517506540668927 1.377871473164818 1.1912945287077796 1.2314751211430435 1.2618784679801942 1.0 12.04188035718746 -10.606435092214634 0.6371380720621119 0.9770122370692684 1.2392759668346853 0.0 0.1250415738239553 0.7160463259074433 0.45211334706205386 0.10352796839873932 0.02059332300299387 2.474941327779932e-11 10.606435092214634 0.2622637297654169 QNS(ph)PAGNKENIKPNETSPS(ph)FSK ddPTM_A549_MK2206_60min_R1 1 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 2 QNS(1)PAGNKENIKPNET(0.101)S(0.381)PS(0.503)FS(0.015)K 77.984 0.00012093 5268100.0 1516.7 1763.1 1094.3 1255.0 1689.5 1896.2 1448.4 1537.3 2551.7 2259.1 2741.8 True False 1772.681880245174 1852.8342591910232 1249.4881948657796 1562.47505633909 1440.976788067117 2096.8546254043094 1711.5555316067241 1755.2169827838004 1973.744024227583 1748.7677409869086 2060.9353901695863 0.8601346207652375 0.8990258831154143 0.606272375556113 0.7581387867819186 0.6991858138495767 1.017428608100018 0.8304751035722119 0.8516603631321846 0.9576933045267233 0.8485310841515558 1.0 11.009083562104513 -8.22189975049781 0.6418412694169278 0.9913678615755559 0.7729591715933617 0.20081190392080595 0.10631322545036394 0.4632615548701726 0.3967937032055466 0.02463394980933224 0.03502405108329996 5.999295438154331e-09 8.22189975049781 -0.2184086899821942 QNS(ph)PAGNKENIKPNETSPSFSK ddPTM_A549_MK2206_60min_R1 3 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 QNS(1)PAGNKENIKPNETSPSFSK;QNS(1)PAGNKENIKPNETSPSFSK;QNS(1)PAGNKENIKPNETSPSFSK 185.7 3.9485e-50 177060600.0 4786.24 5163.27 5720.7 5079.4 7129.1 5769.6 5428.2 5003.3 8708.9 7663.9 8084.2 True False 5594.040299666816 5426.0583888907295 6531.981281521208 6323.853228022934 6080.418833861665 6380.135242449478 6414.433676241109 5712.533096963626 6736.348055255559 5932.6196671902835 6076.670027430509 0.9205766109423305 0.892932866915124 1.0749277568200004 1.0406774104034977 1.000616917886644 1.0499393933929448 1.055583674493746 0.9400762376724187 1.1085591326906377 0.976294523219136 1.0 12.56906523810265 -5.7565298681519526 24.998678864093584 1.0421070381374538 0.9067546856237684 0.47318294462687216 0.047055281675568876 67.96294449033199 346047.2125688496 0.006727448137178853 0.02450189433357426 1.751741955831999e-06 5.7565298681519526 -0.13535235251368538 QNS(ph)PAGNKENIKPNETSPSFSK ddPTM_A549_PD325901_60min_R1 6 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 QNS(1)PAGNKENIKPNETSPSFSK;QNS(0.704)PAGNKENIKPNET(0.28)S(0.013)PS(0.003)FSK;QNS(1)PAGNKENIKPNETSPSFSK;QNS(1)PAGNKENIKPNETSPSFSK;QNS(1)PAGNKENIKPNETSPSFSK;QNS(1)PAGNKENIKPNETSPSFSK 261.79 4.8623999999999985e-124 481163200.0 67149.2 72185.2 75895.79999999999 59748.50000000001 85496.70000000001 59231.00000000001 78224.9 81447.90000000001 75387.40000000001 76028.8 70841.0 True False 73966.13735137173 78268.5001379815 81046.54538652075 63439.0291463112 79491.70673960284 58748.64237397545 81201.79137580769 79823.35773985858 72219.12974474533 71228.32859284374 62128.00609809854 1.190544200542684 1.2597941742150476 1.3045090366903183 1.021101965611814 1.2794826638100611 0.9456064352236386 1.3070078451832516 1.2848208521905486 1.1624247143987392 1.1464769765888836 1.0 15.922956133514454 -10.217210191941001 0.7530506185560158 1.0035715976573971 1.1962027397021424 0.09187508189971005 0.11932245977439784 0.6023797680299232 0.6539764659590448 0.06153428050858977 0.021948968949673648 6.064427494590593e-11 10.217210191941001 0.1926311420447453 QNS(ph)TGQAQIR ddPTM_A549_MK2206_60min_R1 1 QNSTGQAQIR 10 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QNS(0.954)T(0.046)GQAQIR 143.91 4.4509e-08 30670000.0 4358.0 5762.3 5473.9 4649.8 5925.2 5594.1 3787.7 5048.5 6137.7 6819.4 7045.1 True False 5093.523857129604 6055.576457226721 6250.181330417425 5789.001208737453 5053.61092906498 6186.063948936957 4475.876061217063 5764.140335382818 4747.520749892872 5278.892803721012 5295.6072351315715 0.9618394323768337 1.1435093632045519 1.1802577217118966 1.0931704244100013 0.9543024443993572 1.1681500674555336 0.8452054433953612 1.0884758025751897 0.8965016737641265 0.9968437176949841 1.0 12.370580408895457 -7.5470548569942615 1.1676491144160708 0.9553771466951778 1.0937906629825211 0.17966203584265494 0.09705253709447796 0.43604480682997887 1.1920009158162275 0.01575451949033774 0.028905493755760427 2.8375605853054334e-08 7.5470548569942615 0.13841351628734333 QNS(ph)TSLTGKPGALPANLDDMK ddPTM_A549_MK2206_60min_R1 2 QNSTSLTGKPGALPANLDDMK 21 1 E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6 E7ER32 MKL1;mkl1 MKL/myocardin-like protein 1 1 QNS(0.895)T(0.028)S(0.034)LT(0.043)GKPGALPANLDDMK;QNS(0.762)T(0.075)S(0.075)LT(0.089)GKPGALPANLDDMK 84.93299999999999 9.8276e-09 1929100.0 1411.4 1574.6 1094.9 1395.1 1823.5 1281.1 1286.0 1617.9 2168.7 1958.1 2400.3 True False 1649.6098145830008 1654.7404143396202 1250.1732838879122 1736.8995626284184 1555.2655655758442 1416.6651516746444 1519.6495537463738 1847.2422796109481 1677.4929127022622 1515.763850040489 1804.2392650901065 0.914296593861467 0.9171402298779813 0.6929088109749549 0.9626769554545056 0.8620062735959645 0.7851869644372771 0.842266091393638 1.0238344300298186 0.9297508069798522 0.8401124392804905 1.0 10.817174955666621 -8.247627231475537 24.58734437362237 0.9701754451896225 0.8518986475408123 0.22322865929323987 0.08127635233688996 494.70319909420715 880633.994429344 0.011212550132456336 0.014435157357776665 5.654220860339662e-09 8.247627231475537 -0.11827679764881016 QNS(ph)TSLTGKPGALPANLDDMK ddPTM_A549_PD325901_60min_R1 4 QNSTSLTGKPGALPANLDDMK 21 1 E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6 E7ER32 MKL1;mkl1 MKL/myocardin-like protein 1 1 QNS(0.872)T(0.058)S(0.04)LT(0.031)GKPGALPANLDDMK;QNS(0.952)T(0.034)S(0.007)LT(0.007)GKPGALPANLDDMK;QNS(0.567)T(0.159)S(0.214)LT(0.06)GKPGALPANLDDMK;QNS(0.519)T(0.11)S(0.14)LT(0.23)GKPGALPANLDDMK 121.62 1.9454e-15 46712200.0 10646.599999999999 12042.7 12267.6 10065.400000000001 15634.3 11590.8 13848.0 13446.499999999998 11358.9 12299.3 10921.0 True False 11727.434994387324 13057.580592859329 13100.15310707157 10687.116897818032 14536.20070340696 11496.408367717493 14374.993217916359 13178.299008924814 10881.52493463879 11522.720098988328 9577.78623392292 1.2244410877380734 1.3633192758689434 1.3677641980224005 1.1158232849221512 1.517699429532282 1.200319999521302 1.500868036394729 1.3759232756990838 1.1361210898712946 1.2030671616136908 1.0 13.225476521165124 -8.971124173190564 2.515459122147875 1.0523119049180167 1.3351848509565984 0.3603846958863318 0.12530577526184666 0.14422720812409204 1.8148947068846193 0.02118281450912624 0.021496228536661513 1.068749259453178e-09 8.971124173190564 0.2828729460385817 QNSNSQST(ph)PGSSGQR ddPTM_A549_MK2206_60min_R1 1 QNSNSQSTPGSSGQR 15 0 A8CG34;A8CG34-2;A6NF01;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 QNS(0.026)NS(0.021)QS(0.126)T(0.826)PGS(0.001)SGQR 48.70399999999999 0.028125999999999998 9859000.0 0.0 242.85 172.57 0.0 221.28 148.32 182.48 0.0 179.9 296.14 196.32 True False 0.0 255.21002770378314 197.04302091564236 0.0 188.7300051278435 164.01512395315223 215.6342539406208 0.0 139.15293724126752 229.2417683218375 147.56832584364028 0.0 1.7294363559711134 1.3352663573917904 0.0 1.2789330233902436 1.1114520884850219 1.461250256163382 0.0 0.9429729343728579 1.5534618761260215 1.0 7.205239283448925 QNSNSQST(ph)PGSSGQR ddPTM_A549_PD325901_60min_R1 4 QNSNSQSTPGSSGQR 15 0 A8CG34;A8CG34-2;A6NF01;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 QNSNS(0.001)QS(0.019)T(0.98)PGSS(0.001)GQR;QNS(0.155)NS(0.155)QS(0.034)T(0.219)PGS(0.219)S(0.219)GQR;QNS(0.001)NS(0.004)QS(0.138)T(0.857)PGSSGQR;QNS(0.231)NS(0.149)QS(0.121)T(0.252)PGS(0.124)S(0.124)GQR 85.45700000000001 0.00012192 34421800.0 979.75 630.36 978.0600000000001 721.01 1462.02 853.79 1008.5500000000001 927.6399999999999 968.69 1193.85 1170.13 True False 1079.2134987461704 683.4826494486128 1044.4370331525656 765.5451501674823 1359.3327588951881 846.8370173131722 1046.930922149737 909.1374924804974 927.9793280102162 1118.4701072562848 1026.211428065217 1.0516482951090125 0.6660251783954765 1.0177600878229456 0.7459916438572647 1.324612766647928 0.8252071592203655 1.0201902780634433 0.8859163595503446 0.9042769380962712 1.089902213781627 1.0 10.003112281491164 QNSNSQSTPGS(ph)SGQR ddPTM_A549_MK2206_60min_R1 1 QNSNSQSTPGSSGQR 15 0 A8CG34;A8CG34-2;A6NF01;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 QNS(0.005)NS(0.004)QS(0.019)T(0.096)PGS(0.741)S(0.135)GQR 65.472 0.0037211999999999996 2588200.0 270.57 163.13 251.89 146.22 201.79 120.26 162.79 106.29 246.5 350.39 422.82 True False 316.2356011986134 171.4326202154341 287.61178964154345 182.04390656406522 172.10695830959665 132.98583337787275 192.366835812109 121.35693299947313 190.6681435796134 271.2366556435764 317.82212476165427 0.9950081399643569 0.5393980055479061 0.9049457770041448 0.5727855060455159 0.5415197524044796 0.41842849511374763 0.6052657157092871 0.38183915953139785 0.599920926595661 0.8534228252579523 1.0 8.31207574924053 -10.52807059428863 0.9246032792748707 0.9910280663766456 0.610341270455666 0.29481040634435607 0.1793317644093718 0.4276536953907035 0.6765600978664609 0.10209018861960238 0.03171286781445746 2.9643494972560973e-11 10.52807059428863 -0.38068679592097965 QNSNSQSTPGS(ph)SGQR ddPTM_A549_PD325901_60min_R1 1 QNSNSQSTPGSSGQR 15 0 A8CG34;A8CG34-2;A6NF01;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 QNS(0.004)NS(0.02)QS(0.1)T(0.076)PGS(0.7)S(0.1)GQR 63.037 0.004628 3710800.0 383.43 327.31 225.51 284.25 320.7 368.79 207.65 396.46 327.12 238.03 335.5 True False 422.35553133375294 354.89356239454474 240.81446470179253 301.80747692141153 298.17513835493827 365.7866965119346 215.55223438044 388.55229428314675 313.3722839904427 223.000745177546 294.23562690972807 1.4354330091485905 1.2061542856719611 0.818440877574879 1.025733967334984 1.013388968176919 1.2431760910590155 0.7325837344862788 1.3205480871368278 1.0650385450657402 0.7578985166400769 1.0 8.200828132676458 -5.487040523211964 4.677044147824128 1.031952444993197 1.3996095490205795 0.3488341339734472 0.17669008097077699 0.14108823770192538 7.157794361150921 0.01901904817584644 0.10863651730612113 3.2580629920264996e-06 5.487040523211964 0.3676571040273826 QNSPAGNKENIKPNET(ph)SPSFSK ddPTM_A549_MK2206_60min_R1 3 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 QNSPAGNKENIKPNET(0.546)S(0.449)PS(0.005)FS(0.001)K;QNSPAGNKENIKPNET(0.497)S(0.497)PS(0.006)FSK;QNSPAGNKENIKPNET(0.559)S(0.436)PS(0.004)FSK 138.71 6.1974e-23 126714300.0 6325.16 6369.58 6938.73 6021.429999999999 8668.02 6374.19 5451.459999999999 6608.08 9241.800000000001 9025.5 9416.8 True False 7392.692372685145 6693.764415324125 7922.746250901061 7496.680620312266 7392.965740456665 7048.702554955121 6441.919717158794 7544.795576396263 7148.547056121988 6986.633281518016 7078.348669541526 1.044409186071358 0.9456675176411858 1.1192930188637102 1.059100218186601 1.0444478063462672 0.9958117188103528 0.9100879340514383 1.065897701375164 1.0099173394611838 0.9870428270341971 1.0 12.789197113312648 -7.258205344175836 23.521261214594073 1.0014560371151677 1.042378558828489 0.1736602343461936 0.050785690698942725 197.53617666932277 1436667.255295958 0.007214312582722264 0.012174758815092604 5.518164663816178e-08 7.258205344175836 0.040922521713321336 QNSPAGNKENIKPNET(ph)SPSFSK ddPTM_A549_PD325901_60min_R1 2 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 QNSPAGNKENIKPNET(0.566)S(0.424)PS(0.01)FSK;QNSPAGNKENIKPNET(0.496)S(0.496)PS(0.008)FSK 110.31 7.8744e-11 213762000.0 5135.700000000001 4907.2 5870.0 3822.2999999999997 6591.2 5534.0 5900.299999999999 6112.9 5724.0 6070.5 5557.299999999999 True False 5657.072483297481 5320.7469658199 6268.3734991775145 4058.3947899268646 6128.256850405584 5488.932938791854 6124.839145268048 5990.97341402272 5483.440185746188 5687.207594001991 4873.787330627218 1.1607138554749907 1.0917068400551573 1.2861401357803655 0.83269837492162 1.25739110771108 1.126215110843885 1.2566898655546856 1.2292233960179237 1.1250881119264005 1.1668969547077248 1.0 12.250827584606517 -10.134514899116708 0.9265311163247897 1.010996942081929 1.1506360478877886 0.0 0.12696525273169623 0.6301123817822389 1.07744123927607 0.04730338140563686 0.021473477384468646 7.336435452560604e-11 10.134514899116708 0.1396391058058597 QNSPAGNKENIKPNETS(ph)PSFSK ddPTM_A549_MK2206_60min_R1 3 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 QNSPAGNKENIKPNET(0.177)S(0.812)PS(0.01)FS(0.001)K;QNSPAGNKENIKPNET(0.064)S(0.93)PS(0.006)FSK;QNSPAGNKENIKPNET(0.023)S(0.973)PS(0.004)FS(0.001)K 93.446 2.5351e-07 141804400.0 4527.2 4409.01 4703.84 4603.0599999999995 6714.5 4548.92 4853.97 4630.46 7074.200000000001 6866.15 6063.900000000001 True False 5291.280680586769 4633.409776595663 5370.9152431119865 5730.809906639214 5726.8059446443685 5030.283695071285 5735.873518194622 5286.8418851890165 5471.904995176066 5315.081946251722 4558.066274873935 1.1608608478895173 1.016529707375484 1.178331976592537 1.2572897279335224 1.2564112935814558 1.1036003848387244 1.2584006401603414 1.1598870148800628 1.2004882476895107 1.1660826380587728 1.0 12.154206186390535 -10.725704019175367 0.864599130952795 0.9941799449747809 1.1777528355653126 0.03386134009675612 0.08372988638953134 0.4671674299845467 0.5887825536242226 0.05658473574460358 0.012913980696028447 1.8805980472877895e-11 10.725704019175367 0.18357289059053172 QNSPAGNKENIKPNETS(ph)PSFSK ddPTM_A549_PD325901_60min_R1 3 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 QNSPAGNKENIKPNET(0.164)S(0.834)PS(0.002)FSK;QNSPAGNKENIKPNET(0.076)S(0.803)PS(0.117)FS(0.005)K;QNSPAGNKENIKPNET(0.21)S(0.768)PS(0.021)FS(0.001)K 123.14 4.5808e-16 219360100.0 7152.900000000001 6283.9 7958.1 6142.4 9141.9 7299.6 8539.400000000001 9630.1 8517.8 9225.4 9012.8 True False 7879.057142313326 6813.466306348966 8498.184521942867 6521.80209759746 8499.804481842879 7240.1544777746685 8864.371539938986 9438.0201008327 8159.8264874473925 8642.90666958338 7904.282736846494 0.9968086168760668 0.8619967849312129 1.0751367081453005 0.8250972687497017 1.0753416552548543 0.9159786812817392 1.1214643801412816 1.1940387780964057 1.0323297836259904 1.0934460415103482 1.0 12.948418837828461 -7.175162217706601 1.754710779568045 1.0358736020990476 0.9490090605088202 0.2108657883215771 0.09540256084642626 0.5294444530487525 3.1837599585157883 0.014170319882200046 0.02773776644863498 6.680943243166565e-08 7.175162217706601 -0.08686454159022738 QNSSS(ph)SDSGGSIVR ddPTM_A549_PD325901_60min_R1 1 QNSSSSDSGGSIVR 14 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNS(0.03)S(0.03)S(0.891)S(0.05)DSGGSIVR 141.82 6.2068e-13 123620000.0 1485.2 1223.1 1515.1 1285.3 1539.1 1023.5 1567.7 1583.2 1480.5 1544.4 1498.3 True False 1635.9764106535474 1326.1749294698232 1617.9237970364327 1364.6900618719085 1430.9989256067524 1015.1649553403436 1627.3596813783568 1551.6218340036269 1418.2797335774342 1446.8863204310471 1314.0185985062462 1.2450176980092194 1.0092512624839527 1.231279221523699 1.0385622116941606 1.0890248640570899 0.7725651345379476 1.2384601581958667 1.180821820762266 1.079345250660615 1.1011155565650612 1.0 10.359769980248387 -7.801632436352769 0.0127749481082451 1.2665081122881029e-06 2.162608193952978 0.019791795470689766 0.13098775983889913 1853.8878563372255 11.638903977504322 960.9283959902413 1007.9538946756775 1.5789470407767932e-08 7.801632436352769 2.162606927444866 QNSSSS(ph)DSGGSIVR ddPTM_A549_MK2206_60min_R1 2 QNSSSSDSGGSIVR 14 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNS(0.029)S(0.029)S(0.178)S(0.764)DSGGSIVR;QNS(0.01)S(0.01)S(0.138)S(0.84)DS(0.001)GGS(0.001)IVR 196.95 3.0211999999999997e-31 139948000.0 2708.5 3286.1 3269.3999999999996 2670.0 4255.9 2661.2 2897.4 2720.2 4364.4 4563.5 4391.299999999999 True False 3165.6285835327067 3453.348453932065 3733.050081599357 3324.150119860855 3629.862747756639 2942.8064176384078 3423.8200754469226 3105.796680263119 3375.870368514662 3532.6021805116043 3300.8190162855435 0.9590433670898538 1.046209573107151 1.1309466114868088 1.0070682771337054 1.0996854810420271 0.891538252512247 1.0372637998492247 0.9409169860388511 1.0227371909392278 1.0702198948450343 1.0 11.688608322505976 QNSSSS(ph)DSGGSIVR ddPTM_A549_PD325901_60min_R1 1 QNSSSSDSGGSIVR 14 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNS(0.007)S(0.007)S(0.144)S(0.843)DSGGSIVR 160.78 3.4806e-19 106230000.0 1608.8 1787.1 1723.8 1817.0 1924.5 1322.2 1647.9 1798.4 1736.6 1704.4 1436.2 True False 1772.124191664037 1937.7051888279964 1840.787434051482 1929.231963293596 1789.329759164575 1311.4324415740132 1710.6117362654809 1762.529501182492 1663.6167411891736 1596.7838931252759 1259.5565048219125 1.4069429873768116 1.5384027484356222 1.4614568119845874 1.5316755984411896 1.4206030077368912 1.0411858749913212 1.3581063888097205 1.3993254724461086 1.3207956410215917 1.2677350218210683 1.0 10.298700128765063 -13.905328051056944 0.12547152526030725 1.3638139853159676e-16 1.591184798060954 0.33492857732605663 0.13825785495511872 27.354221942459155 0.30997175206716515 7.408130327307747 0.4365701175439739 1.2435749033587615e-14 13.905328051056944 1.5911847980609537 QNSSSSDSGGS(ph)IVR ddPTM_A549_MK2206_60min_R1 2 QNSSSSDSGGSIVR 14 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNSSSSDS(0.001)GGS(0.999)IVR;QNSSSS(0.001)DS(0.009)GGS(0.99)IVR 162.81 2.4191e-19 22651000.0 5321.2 4942.2 4364.8 4016.0 6517.7 5927.0 5067.9 4705.5 8385.5 7916.9 8102.2 True False 6219.288469150537 5193.7368701570385 4983.794273005712 4999.92018028509 5558.954963944983 6554.19120597582 5988.671830039851 5372.519034989374 6486.197638891878 6128.466791474152 6090.200130655778 1.021196074960653 0.8528023314067661 0.8183301313727221 0.8209779765885479 0.9127704910653582 1.0761865070713335 0.9833292341076163 0.8821580440265226 1.0650220846180076 1.0062833174604155 1.0 12.572273922113993 -7.085423113162054 5.351432799051186 1.0176765986544418 0.871473371957333 0.4038642584989649 0.06999756090128913 0.1479988167013191 7.016131484818666 0.01055850629160757 0.018600097438282344 8.214419668051201e-08 7.085423113162054 -0.14620322669710883 QNSSSSDSGGS(ph)IVR ddPTM_A549_PD325901_60min_R1 2 QNSSSSDSGGSIVR 14 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNSSSSDS(0.002)GGS(0.998)IVR;QNSSSSDSGGS(1)IVR 160.93 3.3999000000000004e-19 23675000.0 4806.1 4715.799999999999 4510.0 4493.6 5493.6 3926.0 4561.9 5524.7 6629.2 6022.2 5743.2 True False 5294.011733936179 5113.217016101541 4816.075720833154 4771.159466293944 5107.748487891145 3894.027957661152 4735.505600867467 5414.505524456695 6350.597777663988 5641.957264244918 5036.822809144412 1.0510617376344542 1.0151671420361335 0.9561733464376614 0.947255769575981 1.0140814321714806 0.7731119606970287 0.940177127587276 1.0749843164279267 1.2608340651043755 1.120142097117627 1.0 12.298298263848567 -8.374512306106737 4.528651699360012 1.1249152409329457 0.9540767362071154 0.43256131412275156 0.08760004619014548 0.20484815264952774 6.827972833635485 0.01886463623338695 0.02289565136381878 4.2217031632354285e-09 8.374512306106737 -0.1708385047258303 QNSSSSDSGGSIVRDS(ph)QR ddPTM_A549_MK2206_60min_R1 1 QNSSSSDSGGSIVRDSQR 18 1 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNSSSSDS(0.012)GGS(0.011)IVRDS(0.976)QR 51.645 0.0044052 4262000.0 395.46 422.47 257.71 282.92 529.41 303.14 338.77 248.09 528.28 652.02 719.97 True False 462.2039799312697 443.9719184847326 294.25715315622756 352.2354127007615 451.53449030518647 335.2180735919536 400.32012389009265 283.25751724376056 408.62542348981 504.72822915244353 541.181578838864 0.8540645099616192 0.8203751492009387 0.5437309115132357 0.650863640733121 0.8343493347906992 0.6194188544096109 0.7397149857705844 0.5234056891801561 0.7550615901718961 0.9326411853030305 1.0 9.079968922344676 -10.144678120471978 0.8247941528731397 0.9855363889688743 0.6998009189001009 0.45764875212857026 0.10869097430229495 0.34694260889929274 0.46545977878890055 0.05235275946773571 0.021557979758415672 7.166743802254555e-11 10.144678120471978 -0.2857354700687734 QNSSSSDSGGSIVRDS(ph)QR ddPTM_A549_PD325901_60min_R1 2 QNSSSSDSGGSIVRDSQR 18 1 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNSSSSDSGGS(0.001)IVRDS(0.998)QR;QNSSSSDSGGS(0.004)IVRDS(0.995)QR 78.324 0.00010228 9457900.0 957.12 1168.8400000000001 1086.87 919.89 1113.31 910.89 1097.87 1125.05 1103.71 1364.8200000000002 1417.5 True False 1054.2861178054957 1267.3422488443362 1160.6315340802507 976.7095160782304 1035.114946310996 903.4720138446173 1139.6500436275155 1102.609995165349 1057.3249069549138 1278.6450322783614 1243.1564862728458 0.8480719277477211 1.0194551231792248 0.9336166016878404 0.7856690021435193 0.8326505614867626 0.7267564653532483 0.9167390076886806 0.886943846040755 0.8505163417719995 1.028547126928417 1.0 10.279792196305866 -10.740496391899121 0.8155521380613057 1.007014718281413 0.866506516605265 0.3670284721090925 0.07381238909357428 0.7458062482014576 0.8085570223407248 0.067702167827721 0.014284494455160465 1.8176221567636674e-11 10.740496391899121 -0.14050820167614808 QNST(ph)GQAQIR ddPTM_A549_MK2206_60min_R1 1 QNSTGQAQIR 10 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QNS(0.471)T(0.529)GQAQIR 74.392 0.012487 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QNSTLVGDKRS(ph)DPEQNEK ddPTM_A549_MK2206_60min_R1 2 QNSTLVGDKRSDPEQNEK 18 2 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 QNS(0.002)T(0.001)LVGDKRS(0.997)DPEQNEK;QNSTLVGDKRS(1)DPEQNEK 103.29 1.3319000000000001e-09 33876000.0 6849.0 7027.8 6449.9 5803.3 8744.7 6599.3 6451.9 5283.7 9244.9 10110.4 10261.7 True False 8004.943758026765 7385.485001839193 7364.592806419438 7225.108760520037 7458.366214034047 7297.633545739199 7624.126715253673 6032.6806556526135 7150.94491107167 7826.453618022247 7713.4366814877985 1.037792113758914 0.957483065825161 0.9547745201687357 0.936691264719947 0.9669316702805224 0.9460936605927518 0.9884215078282202 0.7821002368673111 0.927076374171048 1.0146519562163112 1.0 12.913158073291553 -5.254454371520514 3.830612758948659 0.9506446016939507 1.0470959579643977 0.16447001307580955 0.05832617399335169 0.3939558737747305 11.115435158815949 0.007970638478726907 0.10729001909276394 5.566031098330994e-06 5.254454371520514 0.09645135627044699 QNSTLVGDKRS(ph)DPEQNEK ddPTM_A549_PD325901_60min_R1 2 QNSTLVGDKRSDPEQNEK 18 2 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 QNST(0.001)LVGDKRS(0.999)DPEQNEK;QNSTLVGDKRS(1)DPEQNEK 122.34 4.5878e-11 49229000.0 7220.700000000001 7023.299999999999 8187.799999999999 6750.799999999999 8436.6 7160.200000000001 8503.599999999999 8411.1 7908.0 7681.1 8592.0 True False 7953.740148401607 7615.178139273492 8743.47334524117 7167.781583820801 7844.042320689974 7101.88970515674 8827.209151348467 8243.3340121197 7575.654260810773 7196.114035135272 7535.238469175511 1.0555392746942338 1.0106087777347712 1.1603446103276225 0.9512348697578887 1.0409812977754707 0.9424903716330311 1.1714571725179017 1.0939712188062531 1.0053635716773386 0.9549948637422028 1.0 12.879437454461687 -8.889004716967465 10.776948546457788 1.0023660586638663 1.0518865815154594 0.14179289862990396 0.070075226467415 0.6048175949407693 55.63543392113964 0.011439673428161164 0.012169669679142636 1.2912052494744265e-09 8.889004716967465 0.04952052285159314 QNT(ph)RGPLR ddPTM_A549_MK2206_60min_R1 1 QNTRGPLR 8 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QNT(1)RGPLR 42.21 0.032232 181360000.0 661.98 1249.3 841.32 646.14 931.4 822.46 647.4 726.51 1094.5 949.86 1228.6 True False 773.7060401428757 1312.8840338082623 960.6318268340289 804.4443290063269 794.3922938181191 909.4921712952373 765.0241999186644 829.4950173435618 846.5974975573502 735.28596629358 923.5047123649979 0.8377932779157091 1.4216321976810549 1.0402024093347098 0.8710776655878995 0.860193005170233 0.9848267790276067 0.8283923077766635 0.8982033402074504 0.9167224446416776 0.7961908114259542 1.0 9.850975512637303 -5.99824674725358 24.99973992485458 0.9364134215914945 1.1550138768907898 0.2704176353392761 0.14185727229841563 48.45188373099222 690825.9273569894 0.016615626069390058 0.05114797909223117 1.0040451733543155e-06 5.99824674725358 0.21860045529929528 QNT(ph)RGPLR ddPTM_A549_PD325901_60min_R1 1 QNTRGPLR 8 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QNT(1)RGPLR 72.321 0.0022613000000000004 231130000.0 1758.6 2130.0 2236.4 1908.4 2178.6 1791.6 1912.4 1919.3 1753.2 2191.6 2337.3 True False 1937.1317773871044 2309.5025752356505 2388.1755525656895 2026.2775337091343 2025.5826517619862 1777.0098036030877 1985.1774285054337 1881.0180558382783 1679.5191009172295 2053.222001979203 2049.826917365449 0.9450221191732683 1.1266817484297411 1.1650620510121434 0.9885115257991726 0.9881725303741143 0.8669072439964829 0.9684610011155935 0.9176472608018373 0.8193467881063053 1.0016562786765029 1.0 11.001286381709633 -6.721487564228689 2.1004982416857296 0.9152047338411713 1.0811161169447558 0.388361563820831 0.07479504029674537 0.22786785267799797 2.0448068331505986 0.012296382671627179 0.028728173096820755 1.8989452165208702e-07 6.721487564228689 0.16591138310358455 QNT(ph)STPVRKPGPLPSSLDDLK ddPTM_A549_MK2206_60min_R1 1 QNTSTPVRKPGPLPSSLDDLK 21 2 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 QNT(0.395)S(0.329)T(0.276)PVRKPGPLPSSLDDLK 76.02 8.9075e-05 3347600.0 877.75 1473.5 1649.0 1366.4 2280.0 1493.6 1268.5 1657.3 2326.4 1838.6 1865.3 True False 1025.8927410728563 1548.4948561726362 1882.8529958271688 1701.1680613400276 1944.6150202977378 1651.6517606285618 1498.9700302700423 1892.2273502683877 1799.4741144974143 1423.2589830368427 1402.0945303389478 0.7316858591730281 1.10441544608144 1.3428859146693914 1.213304826835592 1.386935743788715 1.177988876562613 1.0690934154829599 1.3495718793018565 1.2834185395919078 1.0150948828626971 1.0 10.453367904947669 -5.288399132738189 3.8352402364070084 1.1829300715430555 0.698367388896388 0.522415895958995 0.12844926738707457 0.1581558269480848 4.473096900863275 0.01979968859274877 0.20448380958562448 5.147553478678995e-06 5.288399132738189 -0.48456268264666746 QNT(ph)STPVRKPGPLPSSLDDLK ddPTM_A549_PD325901_60min_R1 2 QNTSTPVRKPGPLPSSLDDLK 21 2 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 QNT(0.369)S(0.315)T(0.315)PVRKPGPLPS(0.001)SLDDLK;QNT(0.368)S(0.315)T(0.315)PVRKPGPLPS(0.001)SLDDLK 64.722 0.00050504 10871900.0 5051.0 4700.4 5017.5 5099.4 6235.799999999999 5250.7 5541.9 5163.1 5505.700000000001 5866.799999999999 5395.2 True False 5563.773801650326 5096.519204055232 5358.017722678565 5414.378356422322 5797.818920342138 5207.940040064038 5752.800037144046 5060.117920126407 5274.314575587491 5496.369246765647 4731.624602990654 1.1758696575661787 1.077118248314531 1.1323843652541656 1.1442958414325872 1.2253336658782248 1.1006663624101383 1.215819199500305 1.069425058980403 1.1146942156513908 1.161624116015381 1.0 12.208119902530994 -10.195323946260471 0.4982227244554672 0.9878587772932339 1.1478150543547954 0.0 0.06620620332229006 0.6167245941653046 0.2686305626158827 0.04501190167378016 0.011891398884688582 6.377875741455831e-11 10.195323946260471 0.15995627706156146 QNTAGS(ph)PK ddPTM_A549_MK2206_60min_R1 1 QNTAGSPK 8 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QNT(0.002)AGS(0.998)PK 66.595 0.0084054 2633600.0 1274.2 1338.5 1136.7 1073.6 722.77 554.59 652.69 401.37 724.55 1661.0 1617.0 True False 1489.25380880095 1406.6239328042564 1297.9011524298003 1336.6320481957355 616.4514904476298 613.2763456929526 771.2753244437953 458.265426644073 560.440581868596 1285.7789463854003 1215.4542730703258 1.2252651883307686 1.1572824778105573 1.0678321522957894 1.0996975187057476 0.5071778544909209 0.504565543336955 0.6345572528166755 0.37703222309339635 0.4610955708377925 1.0578587569052922 1.0 10.247279903034407 -6.709433385948895 8.281155377713597 0.6709966110955397 1.1360649019942481 0.5686873061443702 0.2041512807811667 0.1912168804487204 27.22647306190199 0.03444543542554957 0.0716646132688833 1.9523901775100188e-07 6.709433385948895 0.4650682908987085 QNTAGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 QNTAGSPK 8 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QNTAGS(1)PK;QNT(0.005)AGS(0.995)PK 87.184 0.0041863 11775000.0 3126.9 2948.8 3139.0 2771.7 2926.2 2101.2 2333.0 2753.2 2365.9 3441.6 3564.4 True False 3444.340586097885 3197.305724814499 3352.0314163404146 2942.9016140125805 2720.673806841971 2084.0885238506403 2421.783591666584 2698.285266156381 2266.469450638873 3224.2967886528686 3126.001396593248 1.10183590763957 1.022810075612557 1.072306435945133 0.9414268391625763 0.8703367214765138 0.6666946873798277 0.7747224919047929 0.8631746835100595 0.7250378880536961 1.0314444491825066 1.0 11.610102707547874 -6.502420345353469 2.499063420137448 0.843803900796441 1.062543997136011 0.46842602609643746 0.10189653723206046 0.2270500483614816 2.811712412004064 0.01701514918618643 0.042916948325321 3.144703142408599e-07 6.502420345353469 0.21874009633957014 QNTAWDTET(ph)SPR ddPTM_A549_MK2206_60min_R1 1 QNTAWDTETSPR 12 0 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 QNTAWDT(0.005)ET(0.626)S(0.369)PR 84.365 0.0005159 4910400.0 2111.4 2095.0 1695.1 1202.5 2901.4 2669.2 1943.6 2174.8 3698.6 2859.6 2805.6 True False 2467.752701226121 2201.626551531504 1935.4906690276732 1497.1125539822756 2474.6079034613376 2951.6529723284384 2296.726961634101 2483.08456004567 2860.87300545054 2213.6143739215468 2108.8920893791624 1.1701654691836811 1.0439730712725286 0.9177760582322935 0.7099047701501935 1.1734160870174435 1.399622573005799 1.08906803396955 1.1774355703409491 1.3565762894453046 1.0496574884366008 1.0 11.042269559926195 -6.949638130561396 24.99968413195536 1.1851261526070356 0.9606575490814907 0.32221228202584173 0.15161687529950568 111.46177682474125 55329.14291750119 0.025179267179226434 0.04758434426281425 1.1229537491511906e-07 6.949638130561396 -0.22446860352554487 QNTAWDTETS(ph)PR ddPTM_A549_MK2206_60min_R1 1 QNTAWDTETSPR 12 0 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 QNTAWDT(0.001)ET(0.194)S(0.804)PR 113.69 3.0262e-05 5276900.0 2775.3 2842.2 2236.6 2790.8 4303.9 3311.8 3274.2 2950.2 3982.3 3914.2 3777.4 True False 3243.7027904295037 2986.855839982265 2553.78351150215 3474.546125283773 3670.8020113418547 3662.252477805081 3869.0797580687217 3368.399884608577 3080.315408426345 3029.979501470038 2839.367329063605 1.142403364730989 1.0519441459401804 0.8994199113872181 1.2237043406531143 1.2928239237550319 1.289812853841935 1.3626555882590596 1.186320575759897 1.084859777351246 1.0671319171899096 1.0 11.471353787312815 -9.05089879641066 2.086458521112061 1.0306415606575423 1.181387518572199 0.18887037386670302 0.12076348109985306 0.356377430398455 3.1606191817020006 0.0265758138302998 0.026041606204782252 8.894083524293198e-10 9.05089879641066 0.15074595791465661 QNTAWDTETS(ph)PRGER ddPTM_A549_MK2206_60min_R1 2 QNTAWDTETSPRGER 15 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 QNTAWDTET(0.202)S(0.798)PRGER;QNTAWDTET(0.051)S(0.949)PRGER 101.38 1.982e-06 57803000.0 4185.8 3460.6 2722.0 3084.6 5120.9 3284.2 3329.8 3850.5 4950.7 5449.3 5320.1 True False 4892.260707015393 3636.7297585823035 3108.020530407246 3840.327138472954 4367.622393615213 3631.7318641244774 3934.781558370668 4396.320166661691 3829.3743546433757 4218.299345296783 3998.972342709611 1.223379480464351 0.9094160816621552 0.7772048076484879 0.9603285067660252 1.0921861966806734 0.9081662869575388 0.9839481799727955 1.099362483633194 0.95758960714609 1.0548458413289654 1.0 11.965413588022265 -6.539030601362579 24.961565051236153 0.9913258104941852 0.9480791710045543 0.0037985736497223588 0.11303498502990243 761.6013667826702 1176999.3506065698 0.015166767934204446 0.0315790623495279 2.890476205757925e-07 6.539030601362579 -0.04324663948963092 QNTAWDTETS(ph)PRGER ddPTM_A549_PD325901_60min_R1 2 QNTAWDTETSPRGER 15 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 QNTAWDT(0.003)ET(0.204)S(0.794)PRGER;QNTAWDT(0.013)ET(0.221)S(0.767)PRGER 91.62200000000001 1.5224e-06 32934000.0 4484.0 4837.0 4345.7 3583.3 4576.6 4015.9 4267.8 3882.2 4871.5 5300.6 5551.0 True False 4939.212379053663 5244.630965452976 4640.625334816991 3804.632302735247 4255.155404412879 3983.195841867403 4430.2134644297685 3804.7664754730163 4666.767796097586 4965.919211393948 4868.262190688231 1.0145740277713764 1.07731070349593 0.953240633524905 0.7815175423403771 0.8740604424617736 0.8181966553663155 0.910019487632293 0.7815451030453091 0.9586106116108426 1.0200599345065082 1.0 12.249191154237858 -8.980659287474444 21.032829932966134 0.9817405775187928 0.8995592368958141 0.17867977152276815 0.08777456173097632 32.87772402157947 35756.40752715322 0.0165749516838787 0.016918082250417896 1.0455401442724244e-09 8.980659287474444 -0.08218134062297877 QNTEES(ph)TIGR ddPTM_A549_PD325901_60min_R1 1 QNTEESTIGR 10 0 Q9ULF5-2;Q9ULF5 Q9ULF5-2 SLC39A10 Zinc transporter ZIP10 1 QNT(0.001)EES(0.598)T(0.401)IGR 71.555 0.0025681999999999996 14575000.0 698.5 753.49 720.54 812.98 789.33 549.96 647.76 712.64 826.59 917.15 834.45 True False 769.4112057914781 816.9892466733853 769.4401773590065 863.1959281884579 733.8901838406721 545.4813080986571 672.4108612678733 698.4258361447355 791.8512968441551 859.2409924782016 731.8179400143746 1.0513696969171937 1.1163831904111803 1.0514092854076424 1.1795227760766602 1.002831638462234 0.7453784312638504 0.9188225984930973 0.9543710231140505 1.0820331855059488 1.1741185143142625 1.0 9.515340972563681 -6.868363921049789 11.312184026362315 0.9990987646815992 1.0973572623352754 0.2133830180726456 0.10517143134942172 0.548758492873329 54.35480189180246 0.015199356951125238 0.02873885248634747 1.354054294594126e-07 6.868363921049789 0.09825849765367622 QNTEEST(ph)IGR ddPTM_A549_MK2206_60min_R1 2 QNTEESTIGR 10 0 Q9ULF5-2;Q9ULF5 Q9ULF5-2 SLC39A10 Zinc transporter ZIP10 1 QNT(0.001)EES(0.346)T(0.654)IGR;QNTEES(0.383)T(0.617)IGR 73.632 0.0017722999999999999 26150000.0 1491.4699999999998 1178.26 1384.5500000000002 1130.88 1492.3899999999999 935.53 955.3199999999999 1034.05 1586.0900000000001 2175.1499999999996 2099.17 True False 1743.1936730594518 1238.2284012446344 1580.9000093223199 1407.9456507671327 1272.8614079570789 1034.5271636454452 1128.8892781376246 1180.6297541453114 1226.8431474652689 1683.7821042927155 1577.88815485531 1.1047637740960798 0.7847377505398525 1.0019087883116065 0.8922974967742497 0.8066867122618069 0.6556403636481508 0.7154431539801641 0.7482341194541595 0.7775222494003503 1.0671111885285152 1.0 10.62377923136059 -5.251012790091609 23.438477562249812 0.8536008799444026 1.1047641187962574 0.25988905152865116 0.12527102906952417 701.4821518585331 1576820.6797167854 0.01789384194165495 0.3267352556869601 5.6103145325899475e-06 5.251012790091609 0.25116323885185476 QNTEEST(ph)IGR ddPTM_A549_PD325901_60min_R1 1 QNTEESTIGR 10 0 Q9ULF5-2;Q9ULF5 Q9ULF5-2 SLC39A10 Zinc transporter ZIP10 1 QNTEES(0.048)T(0.952)IGR 77.597 0.0014739 22443000.0 733.8 939.96 676.53 570.43 824.32 959.83 733.93 634.12 983.2 1003.8 898.14 True False 808.2948358049907 1019.1737279899069 722.4433941053771 605.6641655594749 766.422606949619 952.0134627106229 761.8601077719063 621.4719791424832 941.8795231701009 940.4198966904199 787.6744737785491 1.0261787866852201 1.2939021917275468 0.9171852308984291 0.7689269942366502 0.9730194800816854 1.2086382057599558 0.9672271136541866 0.7889959619501482 1.195772561540322 1.1939194781559146 1.0 9.62145571273527 QNTES(ph)PR ddPTM_A549_PD325901_60min_R1 1 QNTESPR 7 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QNT(0.007)ES(0.993)PR 90.65700000000001 0.012502 5093000.0 622.56 962.74 634.84 667.19 995.18 854.11 417.91 632.09 851.81 879.47 1160.5 True False 685.7618328955507 1043.8734785363235 677.9240600030417 708.4008110015704 925.2819899846197 847.1544113392684 433.81379373912705 619.4824690849879 816.0113879490679 823.9401141087104 1017.7658570156168 0.6737913520762057 1.025651893646012 0.6660903933159152 0.6960351500479748 0.909130507381937 0.8323667035003214 0.4262412525914303 0.6086689436620415 0.8017673046547746 0.809557629025541 1.0 9.991189983820757 -9.956525972012654 1.0140789610605234 0.9735737759664779 0.7404501669203166 0.11304023401669872 0.15905802581385659 0.4586022682741705 0.9564694639566386 0.0546620006817458 0.030040736138677297 1.1052843683403996e-10 9.956525972012654 -0.23312360904616125 QNTS(ph)TPVR ddPTM_A549_PD325901_60min_R1 1 QNTSTPVR 8 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 QNT(0.051)S(0.657)T(0.292)PVR 47.823 0.036751 6427900.0 1010.4 1074.1 1222.1 885.43 1288.3 851.78 882.93 1039.8 1069.6 1201.4 1333.8 True False 1112.9750641828332 1164.6181765542772 1305.0390550843003 940.1210001425694 1197.814252393724 844.8433860867588 916.5303843078343 1019.0603732926795 1024.6484316341935 1125.543398967793 1169.7510556548302 0.9514631842411857 0.9956119901959143 1.1156553770782753 0.8036932265184294 1.0239907428193633 0.7222420377417935 0.7835260159647882 0.8711771349692917 0.8759542696549157 0.9622076368528776 1.0 10.191985815337059 -6.259614719659263 24.998751451808698 0.9068214339431379 1.0183803581263315 0.2685913766136062 0.09632676930845586 210.77623357705613 2887706.9224679084 0.014540257110058566 0.03646431575619105 5.500286102846146e-07 6.259614719659263 0.11155892418319369 QNTST(ph)PVR ddPTM_A549_MK2206_60min_R1 2 QNTSTPVR 8 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 QNT(0.001)S(0.011)T(0.987)PVR;QNT(0.01)S(0.118)T(0.872)PVR 79.97399999999999 0.0042335 9767600.0 1934.1599999999999 1725.06 1649.0900000000001 1428.8 1642.12 1581.59 1168.5900000000001 1438.83 2219.7 2602.0 2658.8 True False 2260.5989223280853 1812.858185673 1882.9557591804883 1778.85606414127 1400.5663233032096 1748.9528040255257 1380.9076765260304 1642.7885587320718 1716.9414941325258 2014.2063928325174 1998.5465808530494 1.131121457956303 0.9070882825754348 0.9421625581410152 0.8900748579910468 0.7007924342225734 0.8751123545386726 0.6909559625758689 0.8219916285518211 0.8590950596706509 1.0078356001954099 1.0 10.964735483231074 -4.770192698622719 1.5022838316094453 0.8858064540379623 1.6783980730335377 0.35608171837710734 0.09923880167892453 4.375485078067121 3.2508791906839205 0.015754380092462612 7.434861320848315 1.6974903004478708e-05 4.770192698622719 0.7925916189955754 QNTST(ph)PVR ddPTM_A549_PD325901_60min_R1 1 QNTSTPVR 8 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 QNT(0.02)S(0.117)T(0.863)PVR 73.985 0.005414899999999999 6431600.0 1122.2 1585.2 1123.0 985.37 1363.9 879.79 822.45 1211.3 1491.5 1339.5 1601.1 True False 1236.124917880024 1718.7903672598832 1199.21353314759 1046.2340669623607 1268.1043691995646 872.6252819334452 853.7487848119088 1187.139671253533 1428.8174418309657 1254.9237413994997 1404.1748502091382 0.8803212204633313 1.2240572226485085 0.8540343340923523 0.7450881681911155 0.9030957711646045 0.6214505848779988 0.6080074605272635 0.845435788197403 1.0175495178667793 0.8937090286245983 1.0 10.455506878298385 -8.746133198954588 7.729226684099806 1.0083631219308868 0.833088980885266 0.11380423695354303 0.15870060841474484 0.19425289036640445 60.386832132562425 0.028189937162227535 0.03141526245525066 1.7941832629734415e-09 8.746133198954588 -0.1752741410456209 QNVGTLESFS(ph)PGDFR ddPTM_A549_MK2206_60min_R1 1 QNVGTLESFSPGDFR 15 0 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9 Q6ULP2-7 AFTPH Aftiphilin 1 QNVGTLES(0.106)FS(0.894)PGDFR 100.45 7.5562e-06 1896500.0 896.33 1246.2 782.33 755.75 1444.9 891.38 1076.5 1096.6 1536.9 1357.8 1421.5 True False 1047.6085908354694 1309.6262570494323 893.2761578080458 940.908783926907 1232.3571240474566 985.7052399498434 1272.086115558298 1252.046408196653 1188.7946039249805 1051.0720369669455 1068.5023185958366 0.9804457815423138 1.22566533947298 0.8360076925073379 0.880586562660336 1.1533499765044481 0.922511091267635 1.1905319187608308 1.1717769689466087 1.1125802754337726 0.9836871840841702 1.0 10.061374323238272 -6.77176042178662 24.99678420547698 1.0697264293117241 0.9878420680309694 0.12538418589103506 0.12020686078548296 394.72240767984357 955988.6825791791 0.01724588839505523 0.032850178694783905 1.6913737193314296e-07 6.77176042178662 -0.08188436128075471 QNVQVFEFQLTSEEMK ddPTM_A549_PD325901_60min_R1 2 QNVQVFEFQLTSEEMK 16 0 B4DK69;P52895;Q04828 B4DK69;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 63.537 0.0020242000000000003 3803500.0 2294.0 2219.6 2471.8 2145.6 3086.8 3121.8 2854.6000000000004 3310.1 3293.1000000000004 2422.4 2947.1 False True 2526.885191246455 2406.653481686878 2639.551212140884 2278.1288389888473 2869.993816881894 3096.3770958294926 2963.2333650970572 3244.0774587767846 3154.70245906373 2269.449250590629 2584.625383206139 0.9776601311993388 0.9311420901939402 1.021250982556943 0.8814154862794494 1.1104099787651878 1.197998408569579 1.146484664412476 1.255144161260468 1.220564682047048 0.8780573251878597 1.0 11.33573947547079 -6.845820106161159 7.154522505458097 1.1293768337327634 0.9566228013586194 0.35507122007597836 0.10450166563304919 0.171008591115755 12.228838655602823 0.014260008376126818 0.027120663090472664 1.4261982323412243e-07 6.845820106161159 -0.172754032374144 QNVS(ph)PAPEGQV ddPTM_A549_PD325901_60min_R1 2 QNVSPAPEGQV 11 0 Q86V87 Q86V87 FAM160B2 Protein FAM160B2 1 QNVS(1)PAPEGQV;QNVS(1)PAPEGQV 63.727 0.0065808 3518500.0 920.55 1180.29 848.4200000000001 954.59 1421.26 1521.23 869.35 970.55 1361.1 1178.06 1292.67 True False 1014.0035583269072 1279.757180528116 905.9988831639164 1013.552856268813 1321.435600680823 1508.8416072421994 902.4335899765733 951.1916188682541 1303.8977003527498 1103.6770905510227 1133.679784910278 0.8944355997378552 1.12885243043246 0.7991664800088318 0.8940380429814473 1.1656162686056932 1.3309239763515874 0.7960215944469664 0.8390302372230564 1.1501463796992228 0.9735351245046416 1.0 10.146797484060933 -6.740735748460644 24.987327198904318 1.0589112992688192 0.9341068822226852 0.08374790642678032 0.15989573469608054 426.4204748672955 514646.400045668 0.023176846837410996 0.04820581236180152 1.8166206705819194e-07 6.740735748460644 -0.12480441704613399 QPAPGGGGGGGPS(ph)PCGPGGGGR ddPTM_A549_PD325901_60min_R1 1 QPAPGGGGGGGPSPCGPGGGGR 22 0 Q9H6S0;D6RF50;D6RA70 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 QPAPGGGGGGGPS(1)PCGPGGGGR 56.54 0.0048613 2792500.0 819.04 513.82 551.14 542.69 881.56 732.09 755.87 699.73 647.16 1057.9 775.64 True False 902.1883378546197 557.1214146514469 588.543674674054 576.210728761586 819.6422668168988 726.1281017636657 784.6350464779352 685.7733362224338 619.962115759522 991.1040134576568 680.2411971870689 1.3262771228578125 0.8190056952669927 0.865198516508259 0.8470682621757263 1.204928884352022 1.0674568149743768 1.1534659319702414 1.0081326139290614 0.9113857236568254 1.4569891055644186 1.0 9.409902571853525 -4.259197175866456 22.94964138434983 0.9888941363383024 1.0018226879779517 0.0 0.20968492449599704 0.0 0.0 0.019380452531739527 0.0 5.505576786439205e-05 4.259197175866456 0.012928551639649344 QPAQDTAPT(ph)PAPR ddPTM_A549_MK2206_60min_R1 2 QPAQDTAPTPAPR 13 0 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 QPAQDT(0.048)APT(0.952)PAPR;QPAQDT(0.022)APT(0.978)PAPR 53.001000000000005 0.024256 2672100.0 1389.3899999999999 1811.9700000000003 1277.35 1204.0300000000002 1370.08 1051.3 775.4100000000001 1123.1100000000001 1451.8200000000002 1743.29 2112.3999999999996 True False 1623.8850646758372 1904.1915334503772 1458.4974373680002 1499.0174040509614 1168.5430469340006 1162.5478682035384 916.2919599303859 1282.3142818801225 1122.9850880801387 1349.4795782325123 1587.8327807258852 1.0227053405040993 1.199239338401785 0.9185459924194544 0.9440650314359165 0.7359358372736174 0.7321601382181279 0.5770708169354576 0.807587736848402 0.7072439249974174 0.8498877177832236 1.0 10.632843270744821 -6.1126466793860015 1.8761449433928301 0.8177262685661478 1.107943921813792 0.5072937393171725 0.11774311213928314 0.29912602949390216 1.9892921147979192 0.021433326828843163 0.08402533218357809 7.715308933682579e-07 6.1126466793860015 0.29021765324764426 QPAQDTAPT(ph)PAPR ddPTM_A549_PD325901_60min_R1 2 QPAQDTAPTPAPR 13 0 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 QPAQDT(0.031)APT(0.969)PAPR;QPAQDT(0.071)APT(0.929)PAPR 49.928999999999995 0.031094 5009700.0 1919.15 1754.1 1532.17 1433.93 2125.46 1728.0700000000002 1309.97 1495.78 1516.0 1746.65 2061.58 True False 2113.9806951964406 1901.9241630144847 1636.1522698866806 1522.5005994086875 1976.1750220389372 1713.997170859783 1359.8216251930894 1465.9454944832898 1452.2877920320107 1636.3662209148465 1808.018729432362 1.1692249979402243 1.051938307968527 0.9049421022316291 0.8420823161974021 1.0930058355420735 0.9479974642728962 0.7521059395330563 0.8108021618468144 0.8032482011333836 0.9050604367514451 1.0 10.820193907503258 -7.526131212440186 24.99033055571784 0.8838716836005226 1.0011773422960528 0.32998931886126426 0.10311417877508157 133.59851249230718 1026499.9204416586 0.0184444057929401 0.02743551866736036 2.977616672714536e-08 7.526131212440186 0.11730565869553022 QPAQELS(ph)PTPGGTAHQALK ddPTM_A549_MK2206_60min_R1 1 QPAQELSPTPGGTAHQALK 19 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 QPAQELS(0.909)PT(0.091)PGGTAHQALK 130.81 5.0002e-17 45557000.0 3620.0 5083.9 4509.3 5071.2 6988.4 4831.4 4503.3 4240.2 8053.3 7137.9 6563.9 True False 4230.967499497282 5342.648794907405 5148.786545835927 6313.644227654822 5960.4156174775 5342.655541176238 5321.491318340625 4841.261335067887 6229.240408477485 5525.44343251315 4933.902475575948 0.8575296168583854 1.0828444261626275 1.0435525572959152 1.2796451204515982 1.2080529858429607 1.082845793491809 1.0785562431935651 0.9812235566133181 1.262538211753026 1.119893119060516 1.0 12.268513484006352 -5.0759003921129935 1.7307207718504738 1.1232407484619207 0.6611736313175113 0.38887282728349937 0.09337212918472237 1.520337915481572 3.01178568703934 0.016009684686282655 1.3401185220982554 8.396525434794734e-06 5.0759003921129935 -0.4620671171444094 QPAQELS(ph)PTPGGTAHQALK ddPTM_A549_PD325901_60min_R1 2 QPAQELSPTPGGTAHQALK 19 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 QPAQELS(0.997)PT(0.003)PGGTAHQALK;QPAQELS(0.986)PT(0.014)PGGTAHQALK 189.09 3.2998999999999997e-44 91767000.0 15453.0 16659.6 18837.2 15086.0 21232.0 16385.5 19508.5 21152.0 19685.300000000003 19616.2 20777.0 True False 17021.77718410266 18063.56295887129 20115.605669285636 16017.827957208126 19740.737566423602 16252.061920595215 20250.90664296082 20730.106766577017 18857.995298474758 18377.629784278375 18221.560716254622 0.9341558305111762 0.991329076589889 1.1039452647621684 0.8790590557327701 1.083372487890886 0.8919138252574321 1.1113705877508018 1.1376691102033119 1.034927555994279 1.0085650768588956 1.0 14.15335891394568 -7.7751593920820365 24.999873064035786 1.0343973538557945 0.9867741835426379 0.17123673405839557 0.07680642204231014 471.374026313971 858910.8891315879 0.011686424738236442 0.0161932288263178 1.6781879868795357e-08 7.7751593920820365 -0.04762317031315655 QPAQSQNLS(ph)PLSGFSR ddPTM_A549_MK2206_60min_R1 1 QPAQSQNLSPLSGFSR 16 0 Q9P2M7-2;Q9P2M7;A6PVU7 Q9P2M7-2 CGN Cingulin 1 QPAQS(0.001)QNLS(0.988)PLS(0.007)GFS(0.004)R 90.37899999999999 1.0575e-05 4067600.0 2638.8 2571.4 2029.8 2536.9 3052.2 2727.6 2484.3 2390.6 4119.9 3893.5 3467.7 True False 3084.164927534096 2702.273276662583 2317.656161873853 3158.440613885768 2603.2254232248924 3016.232821565654 2935.6651526999367 2729.4748709054534 3186.7492281283935 3013.955645846813 2606.5743863487733 1.18322536417398 1.036714429028002 0.8891578824728535 1.211720881793071 0.9987151860536112 1.157163531323854 1.1262541242155555 1.0471501926821418 1.2225813484618466 1.1562899035728995 1.0 11.347939316775244 -6.285479802989889 24.981330526105502 1.1064064040269666 1.036400652366044 0.1145244291579659 0.09521048683178131 1525.2474818819624 1584940.6907250786 0.014788076830609155 0.03438248757096579 5.182271917756897e-07 6.285479802989889 -0.07000575166092249 QPAQSQNLS(ph)PLSGFSR ddPTM_A549_PD325901_60min_R1 2 QPAQSQNLSPLSGFSR 16 0 Q9P2M7-2;Q9P2M7;A6PVU7 Q9P2M7-2 CGN Cingulin 1 QPAQSQNLS(0.987)PLS(0.011)GFS(0.002)R;QPAQSQNLS(0.561)PLS(0.236)GFS(0.202)R 160.43 2.0209000000000002e-20 13538100.0 5627.1 5926.200000000001 6075.4 5058.2 8129.7 6550.3 6122.5 6898.7 6443.4 6821.200000000001 6374.9 True False 6198.359049547927 6425.6216720007105 6487.713178348058 5370.63352599431 7558.697917942444 6496.956528545046 6355.495087860553 6761.100016574547 6172.6063055270815 6390.508267886726 5590.827713820646 1.1086657230065327 1.149314913803628 1.1604208733369286 0.9606151004649971 1.3519819076622914 1.1620741795502714 1.1367717649659697 1.209320043946438 1.1040594741040342 1.143034376124532 1.0 12.448846172421916 -9.779975134388923 0.8430620781396573 1.0125305521562007 1.1538155536381014 0.03460775725693277 0.09578586163617965 0.47536051913748095 0.7042699455571002 0.03132449613106335 0.01748878443051021 1.6596819301138666e-10 9.779975134388923 0.1412850014819007 QPAS(ph)PDGRT(ph)SPINEDIR ddPTM_A549_MK2206_60min_R1 2 QPASPDGRTSPINEDIR 17 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 QPAS(0.887)PDGRT(0.599)S(0.514)PINEDIR;QPAS(0.973)PDGRT(0.622)S(0.406)PINEDIR 49.515 0.011032 17543700.0 1264.37 1124.1100000000001 1318.3400000000001 1141.25 1433.29 1469.0700000000002 1461.13 1292.44 1676.27 1839.73 1672.92 True False 1477.764745121375 1181.3223975379858 1505.300435730012 1420.8563012326586 1222.4549396677812 1624.5260123102569 1726.5984078269355 1475.6473279315003 1296.5975214531375 1424.1337152520232 1257.487793756839 1.175172238218267 0.939430508513086 1.1970696202408566 1.1299165751643154 0.9721406010754232 1.2918821322765 1.3730538112569612 1.1734883911062812 1.031101477000787 1.1325228939179737 1.0 10.296328680739057 -8.811591783419889 5.723053585423303 1.0139265328730493 1.1553321061456794 0.09835352999349234 0.12201106644006578 0.2196759631421061 15.826800023748438 0.02118773542935302 0.02261975356586201 1.5431502608198933e-09 8.811591783419889 0.14140557327263004 QPAT(ph)PTR ddPTM_A549_MK2206_60min_R1 1 QPATPTR 7 0 O43237;O43237-2;J3KSD2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 QPAT(1)PTR 99.855 0.012012 71094000.0 2910.8 3093.2 2893.1 2387.6 3678.6 2873.7 2346.9 2467.9 3208.1 4246.3 3968.0 True False 3402.0718777725674 3250.6306678745837 3303.3850832186663 2972.562107183438 3137.4828130119527 3177.7930265923246 2773.301351234342 2817.7323826267734 2481.470472282992 3287.0578808165715 2982.6360887712135 1.1406258680300998 1.08985158468118 1.107538762658637 0.9966224570185745 1.0519160633855715 1.0654310254461892 0.9298155285101799 0.9447120931831892 0.8319722548872224 1.1020646780180192 1.0 11.54237224994762 -7.762228676658062 4.602387868872345 0.9209028635403661 1.0738818314497727 0.3109264802288524 0.07376562446994381 0.11647441234875763 6.146565606855873 0.010631901090501723 0.015382093211364948 1.728905768553663e-08 7.762228676658062 0.15297896790940657 QPCPS(ph)ESDIITEEDK ddPTM_A549_MK2206_60min_R1 2 QPCPSESDIITEEDK 15 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QPCPS(0.975)ES(0.025)DIITEEDK;QPCPS(0.982)ES(0.018)DIITEEDK 104.41 5.6444000000000005e-06 4092500.0 2470.6000000000004 3132.0 3079.1000000000004 2852.1000000000004 4326.3 3673.3 2772.1000000000004 3861.7 4365.799999999999 4539.1 5088.1 True False 2887.576879629278 3291.4054221463834 3515.7626800797066 3550.864628035634 3689.907001014956 4062.0061678608 3275.7546873563956 4409.1078009602525 3376.953270750002 3513.7141574581374 3824.5843455838763 0.755004104684858 0.8605916682022878 0.9192535351297048 0.9284315123382498 0.9647864101299197 1.0620778105079751 0.8564995281484127 1.152833197691484 0.8829595494865372 0.9187179154553904 1.0 11.901087249421824 -5.235794911073359 1.0463932848732274 0.9619701445844975 0.6408688718389041 0.4155318756805604 0.07852491138352505 1.46273500212584 1.1981482344475756 0.01150042101072781 0.5285597936794366 5.810387394018814e-06 5.235794911073359 -0.3211012727455934 QPCPS(ph)ESDIITEEDKSK ddPTM_A549_MK2206_60min_R1 1 QPCPSESDIITEEDKSK 17 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QPCPS(0.497)ES(0.497)DIIT(0.006)EEDKSK 52.06100000000001 0.0046183 7907100.0 7861.9 7823.8 6821.7 5754.2 9707.7 7846.8 7296.5 7268.1 10589.0 10656.0 9571.7 True False 9188.79651499936 8221.998001848302 7789.11963713414 7163.979258315852 8279.710189712434 8677.143167715716 8622.179602574191 8298.375432622737 8190.608407158316 8248.802199086582 7194.782724519013 1.2771471866252433 1.1427722443693338 1.0826066519826505 0.9957186384380746 1.1507936384925301 1.2060326906252479 1.1983933264851445 1.1533879132086649 1.1384094170412737 1.146497749122512 1.0 12.812735404290342 -10.447335915517225 0.7617380675043979 0.9985305358746329 1.146262127864818 0.0070161954934852 0.07973424055829369 0.5911203984959656 0.61302084943668 0.04997584196337233 0.014167988908351352 3.569966037222488e-11 10.447335915517225 0.14773159199018504 QPDAKDGDS(ph)YDPYDFS(ph)DTEEEMPQVHTPK ddPTM_A549_PD325901_60min_R1 1 QPDAKDGDSYDPYDFSDTEEEMPQVHTPK 29 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 QPDAKDGDS(0.694)Y(0.151)DPY(0.26)DFS(0.47)DT(0.425)EEEMPQVHT(0.001)PK 59.836999999999996 0.00038004 23569000.0 1299.3 1499.5 1280.2 1213.2 1879.4 1562.0 1331.4 1433.9 1266.1 1584.2 1426.8 True False 1431.2039795058943 1625.8681274957078 1367.0820704679836 1288.13660862289 1747.3974275780208 1549.2795898794498 1382.0671555700355 1405.299739627212 1212.8902199813504 1484.173341638737 1251.3126452304023 1.1437621005119538 1.2993300544775837 1.092518385136486 1.0294282676138922 1.396451505735623 1.238123498379722 1.1044938775597186 1.123060447749616 0.9692943043487128 1.1860931377109662 1.0 10.289226582055724 -8.454421667244294 1.7547878942202837 0.9849715702528529 1.1958863786118055 0.14887055205140887 0.1138519702026327 0.2184575963361725 1.3119150774184591 0.017337874696674374 0.020876978772809775 3.512192674626912e-09 8.454421667244294 0.2109148083589526 QPDAKDGDSYDPYDFS(ph)DT(ph)EEEMPQVHTPK ddPTM_A549_PD325901_60min_R1 1 QPDAKDGDSYDPYDFSDTEEEMPQVHTPK 29 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 QPDAKDGDS(0.366)Y(0.082)DPY(0.415)DFS(0.578)DT(0.556)EEEMPQVHT(0.003)PK 51.586000000000006 0.002595 10058000.0 900.63 936.2 1554.1 1208.7 1273.7 1725.3 1088.7 1586.9 2002.4 1841.3 1639.6 True False 992.0612945912359 1015.0968595941857 1659.5705715624829 1283.3586538431302 1184.2397060264577 1711.249728821391 1130.1310742594987 1555.2480346010336 1918.246091533574 1725.0400037617771 1437.9395942807453 0.6899186158702745 0.7059384577986638 1.1541309371848802 0.892498307263779 0.823567075235043 1.1900706647398183 0.7859377951302525 1.0815809236958704 1.3340241128091872 1.1996609667213727 1.0 10.48978735622369 -4.494544256284344 0.35494717284974026 1.1428887477356935 0.013732040983825787 0.3866620244556873 0.1648283260030535 8.03234900438787 0.4585523677933475 0.051914386908800944 4.344143320774286 3.202253755981364e-05 4.494544256284344 -1.1291567067518677 QPDAKDGDSYDPYDFS(ph)DTEEEMPQVHTPK ddPTM_A549_MK2206_60min_R1 4 QPDAKDGDSYDPYDFSDTEEEMPQVHTPK 29 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 QPDAKDGDSYDPY(0.001)DFS(0.849)DT(0.15)EEEMPQVHTPK;QPDAKDGDSYDPYDFS(0.715)DT(0.285)EEEMPQVHTPK;QPDAKDGDSYDPY(0.001)DFS(0.849)DT(0.15)EEEMPQVHTPK;QPDAKDGDSYDPYDFS(0.863)DT(0.137)EEEMPQVHTPK 135.75 6.7728e-28 30802700.0 4611.469999999999 5976.299999999999 5816.3 5300.6 7402.4 5042.9 4410.629999999999 4053.37 8865.6 8601.6 9984.399999999998 True False 5389.773396383072 6280.46814315882 6641.138799047642 6599.24723795298 6313.516765899984 5576.5363307939015 5211.984378880533 4627.947610425008 6857.555755454035 6658.4925859293535 7504.99792457845 0.7181578796620136 0.8368380919321292 0.8848954877520063 0.8793136659426398 0.8412416404838127 0.7430430210421586 0.6944684637169019 0.616648752862241 0.9137318656672672 0.8872077851111939 1.0 12.873635957547252 -8.963716685368047 11.607702495653461 0.9620097261388423 0.7829025468683426 0.417635653344832 0.08218144878803896 0.43289293225386394 137.1415968097389 0.015518801851047873 0.01634058216637741 1.0871345911680036e-09 8.963716685368047 -0.17910717927049968 QPDAKDGDSYDPYDFS(ph)DTEEEMPQVHTPK ddPTM_A549_PD325901_60min_R1 4 QPDAKDGDSYDPYDFSDTEEEMPQVHTPK 29 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 QPDAKDGDSYDPYDFS(0.996)DT(0.004)EEEMPQVHTPK;QPDAKDGDSYDPYDFS(0.973)DT(0.027)EEEMPQVHTPK;QPDAKDGDSYDPYDFS(0.865)DT(0.135)EEEMPQVHTPK;QPDAKDGDSYDPYDFS(0.822)DT(0.178)EEEMPQVHTPK 143.83 4.3896e-36 97192000.0 9087.4 9535.3 9161.7 9618.6 10126.2 12228.4 11087.3 12720.8 12417.000000000002 11862.6 12364.3 True False 10009.9461582097 10338.873195138265 9783.468055777625 10212.719076574447 9414.97064549354 12128.8159647131 11509.233268703363 12467.073664725456 11895.156671280654 11113.593411516018 10843.569483755444 0.9231227939476405 0.953456627969853 0.9022368575618999 0.9418226250935117 0.8682538217325889 1.1185261442630179 1.0613878839385074 1.1497204572168007 1.0969779544549951 1.0249017565816396 1.0 13.404552120451088 -7.2601635951067385 24.999404250862167 1.061366979027769 0.9202330149545863 0.7509047521257585 0.044763261693634496 58.08773765953293 1138244.5509269177 0.007936209277356932 0.013270631071943555 5.4933390538097226e-08 7.2601635951067385 -0.1411339640731828 QPDAKDGDSYDPYDFSDT(ph)EEEMPQVHT(ph)PK ddPTM_A549_PD325901_60min_R1 2 QPDAKDGDSYDPYDFSDTEEEMPQVHTPK 29 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 QPDAKDGDS(0.004)Y(0.001)DPY(0.005)DFS(0.445)DT(0.551)EEEMPQVHT(0.994)PK;QPDAKDGDS(0.002)Y(0.004)DPY(0.087)DFS(0.43)DT(0.5)EEEMPQVHT(0.977)PK 56.711999999999996 0.001854 12563100.0 2013.29 2657.0 2721.6 2907.8 3832.2 3195.1 3435.6 3149.8 2978.2 3430.6 3636.0 True False 2217.6777186942377 2880.914714742311 2906.3041423103114 3087.408201907053 3563.039492372293 3169.080164932028 3566.343638032458 3086.974768029702 2853.0366109694814 3213.9913305301393 3188.7950505030462 0.6954594709197097 0.9034493183523457 0.9114113940473626 0.9682052791131875 1.1173623377928312 0.9938174497705934 1.1183985115223545 0.9680693550821707 0.8947067985819291 1.0079015049973556 1.0 11.638795660670382 -4.982088311259409 1.2733118564932024 0.9769790995774386 0.40159262084447217 0.622925393776864 0.06797584620327951 1.5497582754463541 1.3360921011510556 0.011267608028511164 1.3754570610518395 1.0421055017483222e-05 4.982088311259409 -0.5753864787329663 QPDISCILGT(ph)GGKSPR ddPTM_A549_MK2206_60min_R1 1 QPDISCILGTGGKSPR 16 1 G3V1T4;P57740;P57740-2 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 QPDIS(0.001)CILGT(0.53)GGKS(0.468)PR 68.42 0.00078016 14016000.0 3998.4 4995.5 4987.9 3371.5 5804.2 4878.9 4160.1 4350.6 6562.3 5974.0 6184.9 True False 4673.232168505506 5249.749612494332 5695.259222490195 4197.517651352384 4950.409868777246 5395.18195964829 4915.936320793382 4967.310873153709 5075.949527839746 4624.46925087681 4649.01863544382 1.00520831060497 1.129216728122055 1.2250454706870615 0.9028825179040536 1.0648290009069092 1.160499103728208 1.0574137697178925 1.0684643927394157 1.0918324760286036 0.9947194480185889 1.0 12.18271049352789 -10.780463639886053 0.7964688920868124 0.9942859432676816 1.0810827379074597 0.13443262189217964 0.07866862502813227 1.3064255432852376 1.309391628589106 0.07334451850949304 0.014301633247820328 1.6578161271456667e-11 10.780463639886053 0.08679679463977807 QPDISCILGTGGKS(ph)PR ddPTM_A549_MK2206_60min_R1 1 QPDISCILGTGGKSPR 16 1 G3V1T4;P57740;P57740-2 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 QPDISCILGT(0.099)GGKS(0.901)PR 81.665 6.542600000000001e-05 14651000.0 2312.2 2495.8 2016.2 1728.0 2596.1 2150.6 2571.8 1925.6 3018.4 2768.3 2970.1 True False 2702.442832137465 2622.825559576292 2302.127477372187 2151.3600775728673 2214.217129032875 2378.175064547258 3039.0627700815917 2198.5596969026765 2334.737219394341 2142.9391073321513 2232.542199410126 1.2104778278553903 1.1748156698983272 1.031168628293094 0.9636369149668443 0.9917918369551568 1.0652318532548277 1.3612565849302025 0.9847785620731252 1.0457751795290662 0.9598649951155909 1.0 11.124471730021723 QPDISCILGTGGKS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QPDISCILGTGGKSPR 16 1 G3V1T4;P57740;P57740-2 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 QPDISCILGT(0.177)GGKS(0.823)PR;QPDISCILGT(0.011)GGKS(0.989)PR 123.55 1.5e-08 43384000.0 13709.1 15090.2 18368.8 14688.0 15303.1 16479.9 17788.0 18780.1 15632.7 17449.7 18113.6 True False 15100.83773989398 16361.904113061504 19615.41722856763 15595.244401131711 14228.26304882899 16345.693158293432 18464.9320739671 18405.51617279655 14975.711983178626 16347.922964015568 15885.74203157094 0.9505906434765804 1.029974179395854 1.234781301974086 0.9817133105987809 0.8956624764869078 1.0289537074068302 1.1623588018281008 1.1586185987546487 0.9427140358578313 1.0290940726297897 1.0 13.955444860237606 -8.810084825483749 24.99987008789745 0.9729482750558216 1.0553806819159015 0.0742294805413154 0.09645862427698994 175.8507589590512 90372.42680683585 0.01723336924754141 0.01834633645592904 1.5485141368527268e-09 8.810084825483749 0.08243240686007991 QPDKEFS(ph)FMDEEEEDEIRV ddPTM_A549_PD325901_60min_R1 2 QPDKEFSFMDEEEEDEIRV 19 2 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 QPDKEFS(1)FMDEEEEDEIRV;QPDKEFS(1)FMDEEEEDEIRV 72.033 0.00037965 42649000.0 3526.7 3995.8 3959.5 3377.9 4609.1 3159.5 4625.7 4157.1 4514.4 3706.5 4140.3 True False 3884.727987780678 4332.54008926132 4228.215480407732 3586.545211232491 4285.372716531793 3133.7700795288865 4801.733544780166 4074.1833793181404 4324.6754672488805 3472.4709574447525 3631.0693475241337 1.069857834147261 1.1931857187512787 1.164454620865549 0.9877380099275709 1.1801957788148 0.8630433020139553 1.3224020488769395 1.122034031681644 1.1910197942646528 0.9563218504247178 1.0 11.826178768194255 -11.000639420716938 1.300008689802358 1.0004899162062006 1.1284083087957828 0.17771171355328108 0.11521609005929441 0.6693437012046624 2.026076322575926 0.07451937377957918 0.017263824741520425 9.985287627212812e-12 11.000639420716938 0.12791839258958215 QPEDDSSQAFISTQNGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 QPEDDSSQAFISTQNGSPR 19 0 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 QPEDDSSQAFIS(0.003)T(0.054)QNGS(0.943)PR;QPEDDSSQAFIS(0.007)T(0.007)QNGS(0.986)PR 174.82 2.6337e-34 41273000.0 2563.5 2740.25 2360.3999999999996 1983.04 4043.0 2272.0 2103.08 2482.1 3038.0 3264.0 3328.2 True False 2996.1561284423456 2879.71702044592 2695.1402130687984 2468.8848890220493 3448.2800557297132 2512.4215319684577 2485.1824132915435 2833.9452761124503 2349.8978506891103 2526.660133053548 2501.7160863529125 1.1976403496730297 1.151096655673694 1.0773165779166678 0.9868765294711257 1.3783658643522312 1.004279240827504 0.9933910673750864 1.132800517041833 0.9393143624522445 1.0099707743963064 1.0 11.288702355519892 -7.940927510147232 1.0919962037293922 0.9760833178312078 1.140218431717517 0.2364701835726153 0.10659838379904293 0.41860727605195813 1.0005834607751394 0.018937508022611346 0.028971616048340185 1.1457041596129886e-08 7.940927510147232 0.1641351138863092 QPEDDSSQAFISTQNGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QPEDDSSQAFISTQNGSPR 19 0 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 QPEDDSSQAFIS(0.01)T(0.006)QNGS(0.985)PR;QPEDDSSQAFIST(0.002)QNGS(0.998)PR 246.39 9.059899999999997e-86 32625000.0 4507.0 4709.9 4583.2 4680.6 5504.6 4812.6 4496.8 5238.9 4642.5 5280.2 5516.8 True False 4964.547322121959 5106.819802395487 4894.243513020513 4969.7100315861335 5117.975885839081 4773.407781212447 4667.928184743378 5134.4060296624575 4447.391869728633 4946.807270875433 4838.268573876566 1.026099987282065 1.0555056471996862 1.0115692087550028 1.0271670445124241 1.0578114479780532 0.9865942140925529 0.9647931100698062 1.0612073206073835 0.9192114496788361 1.0224333757710151 1.0 12.24027514067801 -7.720960938861963 1.004020974718869 0.9662911887692703 1.0355412656496992 0.06188761669033904 0.039804702150351076 0.4333537861211027 0.8810257836219698 0.007519889980461106 0.013126613047781129 1.9012492736240253e-08 7.720960938861963 0.06925007688042883 QPEKEEEEEAGES(ph)VEDIFSEVVGR ddPTM_A549_PD325901_60min_R1 2 QPEKEEEEEAGESVEDIFSEVVGR 24 1 Q8TDD1-2;Q8TDD1 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QPEKEEEEEAGES(1)VEDIFSEVVGR;QPEKEEEEEAGES(1)VEDIFSEVVGR 276.62 2.9165999999999993e-140 132991000.0 26748.3 29290.0 29560.0 27190.0 34026.0 28185.0 28208.0 34081.0 31237.0 32481.0 28400.0 True False 29463.767724942263 31758.37109326396 31566.119358720156 28869.46454702963 31636.13114332753 27955.47070470697 29281.470876009877 33401.22771897272 29924.217519593596 30430.144116757878 24906.98004243302 1.1829522356683158 1.2750791560903207 1.26736036664992 1.1590913269230507 1.2701712969388632 1.1223950337246973 1.1756331287905724 1.3410388438127943 1.2014390130241768 1.2217516561588464 1.0 14.604262485755681 -10.40175621035742 0.714938930884507 0.9950934887002266 1.2239899573877029 0.0 0.08806427588834988 0.3477365688932261 0.31642730832737864 0.043917888871025365 0.012344956377007664 3.9650054594933854e-11 10.40175621035742 0.22889646868747626 QPEYS(ph)PES(ph)PR ddPTM_A549_PD325901_60min_R1 2 QPEYSPESPR 10 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QPEY(0.002)S(0.998)PES(1)PR;QPEY(0.001)S(1)PES(0.999)PR 79.492 0.0014469 6221500.0 1762.0700000000002 1813.42 1689.98 1392.01 2131.66 1555.33 1641.77 1578.02 1640.1799999999998 1776.63 2034.15 True False 1940.954049232626 1966.2432675980435 1804.6722054753006 1477.9912962159158 1981.9395554277776 1542.6639081480182 1704.248455761015 1546.545153167258 1571.2489384795917 1664.4532785984277 1783.9624455392661 1.088001630351531 1.1021774995962297 1.0116088542042005 0.828487897775864 1.1109760524295487 0.8647401249983674 0.9553163296808332 0.8669157565700659 0.8807634613657048 0.9330091464427029 1.0 10.8008695298505 -5.967579513416904 4.7560440169515115 0.9374182936630228 1.0907623302691956 0.4285019610962517 0.07389746480315042 0.14140794310722257 7.774544709596201 0.01025988620913498 0.0327185919988867 1.0775079585716269e-06 5.967579513416904 0.1533440366061728 QPEYSPES(ph)PR ddPTM_A549_MK2206_60min_R1 4 QPEYSPESPR 10 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QPEYSPES(1)PR;QPEYSPES(1)PR;QPEYSPES(1)PR;QPEYS(0.005)PES(0.995)PR 195.72 3.2090000000000006e-19 1013870000.0 39892.2 42549.5 40472.8 37620.1 54571.6 44826.2 40580.9 42752.0 60321.5 57415.5 57361.0 True False 46625.02808934956 44715.087806391275 46212.45162493257 46837.02618883045 46544.18993056138 49569.678730776606 47953.92424232209 48812.22692250893 46658.776563641586 44445.298673203455 43116.68061693689 1.081368681962835 1.0370716661529484 1.0717998455284523 1.0862855284465511 1.0794938122457904 1.149663610962317 1.1121896109851523 1.1320961220594228 1.0821514062776278 1.0308144791587845 1.0 15.395958494517956 -10.27933350890226 0.8698867410705083 1.0042121364803176 1.0923107101334446 0.4846361296192484 0.03011111139955438 0.331935096150596 0.4855754850056808 0.016398841161044377 0.006235082026523948 5.256134756315169e-11 10.27933350890226 0.08809857365312701 QPEYSPES(ph)PR ddPTM_A549_PD325901_60min_R1 4 QPEYSPESPR 10 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QPEYS(0.003)PES(0.997)PR;QPEYS(0.001)PES(0.999)PR;QPEYSPES(1)PR;QPEYSPES(1)PR 149.57 2.9632e-08 1026370000.0 53330.7 56932.4 59684.4 53584.8 66576.6 54552.0 61583.5 61918.2 61878.3 64972.0 60260.4 True False 58744.79340401371 61730.293152275175 63734.94229545327 56894.61139608953 61900.48929280138 54107.74659865798 63927.093792284235 60683.19292711175 59277.770238584686 60869.65683180909 52848.752822149014 1.1115644223754255 1.1680558169464292 1.2059876324790362 1.0765554219899185 1.171276255110769 1.023822582545057 1.2096235081917064 1.1482426677376445 1.121649368681814 1.1517709232733018 1.0 15.689581805395225 -10.422863432052507 0.5847305798229754 0.9880053758794752 1.1416643993469224 0.0 0.06845313017066598 0.6203938101293142 0.3495171258113373 0.0485269589488638 0.01117262744347544 3.7769094068986136e-11 10.422863432052507 0.1536590234674472 QPEYSPES(ph)PRCQPKPSEEAPK ddPTM_A549_MK2206_60min_R1 2 QPEYSPESPRCQPKPSEEAPK 21 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QPEYS(0.006)PES(0.994)PRCQPKPSEEAPK;QPEYS(0.041)PES(0.959)PRCQPKPS(0.001)EEAPK 130.23 3.8287e-18 42515000.0 6154.5 8495.4 9090.0 7388.6 7054.1 5146.0 4946.6 4479.0 8947.0 12241.3 12981.099999999999 True False 7193.229136921555 8927.779573212767 10379.098685305613 9198.807331686861 6016.451234509765 5690.54630436166 5845.333190172483 5113.911966362218 6920.518785423127 9475.981828047923 9757.534609865928 0.7371973991922528 0.9149626345353478 1.0637009347434152 0.9427388884058753 0.6165954285651704 0.5831950930112919 0.5990584121794675 0.5240987781064591 0.7092487049367706 0.9711450901200673 1.0 13.252300959558534 -3.1716069316700475 18.41038717344806 0.8081686700680333 0.6544610829352262 0.0 0.18701718611714185 0.0 0.0 0.027649086025848587 0.0 0.0006735860251921769 3.1716069316700475 -0.15370758713280708 QPEYSPES(ph)PRCQPKPSEEAPK ddPTM_A549_PD325901_60min_R1 2 QPEYSPESPRCQPKPSEEAPK 21 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QPEYS(0.01)PES(0.99)PRCQPKPSEEAPK;QPEYS(0.038)PES(0.962)PRCQPKPSEEAPK 130.01 3.9106999999999995e-18 71544000.0 10930.6 11808.0 13485.599999999999 13575.2 15336.3 18009.7 17308.6 16558.699999999997 13845.900000000001 14527.2 15259.1 True False 12040.266465317578 12803.101600179603 14400.813911500563 14413.709272483893 14259.131195362776 17863.03497429701 17967.28824462935 16228.423738451153 13264.004973414254 13609.950112772547 13382.327435404562 0.8997139341743798 0.9567171078408568 1.0761068267842164 1.0770704380129488 1.0655195267183886 1.3348227399546506 1.3426131090691087 1.2126757334839153 0.991158304669988 1.0170091995182977 1.0 13.708041428825467 -4.2841132279095095 16.40266671170926 1.055913785549571 1.0543169995341637 0.0 0.14415276409735975 0.0 0.0 0.021131774435721076 0.0 5.1986044246246884e-05 4.2841132279095095 -0.0015967860154073588 QPGIHPKT(ph)PNK ddPTM_A549_MK2206_60min_R1 4 QPGIHPKTPNK 11 1 F8W8D3;Q14493;E7EUV9;H0YAE8;Q14493-2;H7C4H8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 QPGIHPKT(1)PNK;QPGIHPKT(1)PNK;QPGIHPKT(1)PNK;QPGIHPKT(1)PNK 69.92 0.0018632000000000002 56869700.0 9151.79 10930.400000000001 10275.619999999999 8879.460000000001 10694.080000000002 8182.789999999999 7895.74 7253.250000000001 12390.9 16847.0 14187.7 True False 10696.388412216642 11486.710672486854 11732.857429339936 11054.928098614111 9120.994998362119 9048.687406503599 9330.293753886004 8281.420399646517 9584.380934201343 13041.250999250344 10664.502529400039 1.0029899081301448 1.0770976555934175 1.1001785968913826 1.0366098248031488 0.8552668043555939 0.8484865919960224 0.8748925445105508 0.7765407131571481 0.8987180515714631 1.2228653857315945 1.0 13.380529048921638 -6.6400164462648315 6.242311086831941 0.9182890274865019 1.0626063336983151 0.23721994636551513 0.11116654657742633 0.159825616654153 8.148627349477863 0.011329009189936554 0.02374687278518552 2.2907809017167898e-07 6.6400164462648315 0.14431730621181327 QPGIHPKT(ph)PNK ddPTM_A549_PD325901_60min_R1 6 QPGIHPKTPNK 11 1 F8W8D3;Q14493;E7EUV9;H0YAE8;Q14493-2;H7C4H8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 QPGIHPKT(1)PNK;QPGIHPKT(1)PNK;QPGIHPKT(1)PNK;QPGIHPKT(1)PNK;QPGIHPKT(1)PNK;QPGIHPKT(1)PNK 94.67299999999999 0.00016139 103291600.0 18765.300000000003 19627.4 18702.8 18796.7 24120.3 22566.500000000004 21330.499999999996 24820.7 21917.100000000002 22457.300000000003 22762.9 True False 20670.33944171628 21281.4698803663 19972.08447707279 19957.729468596975 22426.173338517674 22382.72590589922 22142.243849997456 24325.631667037538 20996.000505768316 21039.342245413212 19963.207605911935 1.0354217543474795 1.0660345922598118 1.0004446615662217 0.9997255883211205 1.1233752501715382 1.1211988748376671 1.109152611499177 1.2185232026457364 1.0517348173822791 1.0539058983278113 1.0 14.285055925141995 -4.466352759407723 16.36366758499102 1.0528133985871928 1.0539938944583673 0.0 0.06682342795803561 0.0 0.0 0.009741154145394367 0.0 3.417017795686763e-05 4.466352759407723 0.001180495871174525 QPGLRQPS(ph)PSHDGSLS(ph)PLQDR ddPTM_A549_PD325901_60min_R1 2 QPGLRQPSPSHDGSLSPLQDR 21 1 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPGLRQPS(0.788)PS(0.212)HDGS(0.212)LS(0.788)PLQDR;QPGLRQPS(0.69)PS(0.187)HDGS(0.444)LS(0.68)PLQDR 48.422 0.02528 32329000.0 8496.14 9123.5 7470.0 9194.64 10119.2 9024.3 8036.29 8444.1 9994.4 11065.3 15513.2 True False 9358.661878272309 9892.369363926035 7976.959120759123 9762.572030257474 9408.462301344847 8950.809092797124 8342.115413576626 8275.675801231699 9574.37012446222 10366.635069584085 13605.17474627718 0.6878751690295741 0.7271034403018535 0.586318020129942 0.7175631487518256 0.691535572074832 0.6578974000496655 0.6131575352135261 0.6082741277171904 0.7037300367701694 0.7619626548656226 1.0 13.731867866380956 -10.33987412763523 0.6950193779637219 1.0057178476102002 0.6614841401199764 0.42579214740072524 0.08093531942695625 0.18722887452414483 0.16332886112716433 0.034599559423883 0.010137691568453634 4.5722068752180796e-11 10.33987412763523 -0.34423370749022386 QPGLRQPS(ph)PSHDGSLSPLQDR ddPTM_A549_PD325901_60min_R1 1 QPGLRQPSPSHDGSLSPLQDR 21 1 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPGLRQPS(0.802)PS(0.192)HDGS(0.006)LSPLQDR 67.31 0.00047204 13404000.0 1500.8 1427.7 1552.6 1524.3 1570.4 1981.5 1428.9 1835.7 1628.9 1660.1 1713.4 True False 1653.160111169434 1548.0172895135859 1657.9687725422507 1618.4525490635256 1460.1005215858916 1965.3633209642321 1483.2775714240815 1799.0855234212086 1560.4429976523365 1555.2810026855623 1502.6626621374917 1.1001538487805802 1.0301828404464237 1.1033539425168393 1.0770564743795032 0.971675518648306 1.3079205136890557 0.9870995059624125 1.1972650740267043 1.0384519672783072 1.0350167352087012 1.0 10.553305454738057 -8.97903397340733 19.993565255811877 1.0169633205947208 1.0949103299575407 0.11733766290971215 0.08938207152736326 21.122936708677248 20144.779067638767 0.014367315376053227 0.014741187451742138 1.0494603296634697e-09 8.97903397340733 0.07794700936281984 QPGQGS(ph)PTPDNDPGRETDDK ddPTM_A549_MK2206_60min_R1 2 QPGQGSPTPDNDPGRETDDK 20 1 P61129 P61129 ZC3H6 Zinc finger CCCH domain-containing protein 6 1 QPGQGS(0.889)PT(0.111)PDNDPGRETDDK;QPGQGS(0.874)PT(0.126)PDNDPGRETDDK 93.96600000000001 6.934399999999999e-07 11562800.0 2664.3 2595.0 2636.8 2473.5 3662.1000000000004 2655.7 2480.5 2467.2 4349.5 4103.9 3875.6 True False 3113.968704118955 2727.0744158588327 3010.73788926445 3079.507611039636 3123.409941154537 2936.7244112890107 2931.174741887932 2816.9331554831124 3364.345194724251 3176.8261397176657 2913.1815588814807 1.068923663417177 0.9361155014677135 1.0334878991958285 1.0570942966637535 1.0721645314663375 1.0080814916378125 1.006176471545893 0.9669610693830827 1.1548697280700881 1.0905005663077902 1.0 11.508379902355756 -8.739889760416247 24.999900599237424 1.0731329578343713 1.0186711812265399 0.2252250724904934 0.051496993335734265 371.7917238093174 431318.76794754335 0.011106257166637969 0.012587920019682999 1.8201628228666445e-09 8.739889760416247 -0.05446177660783147 QPGQVIGATTPSTGS(ph)PTNK ddPTM_A549_MK2206_60min_R1 2 QPGQVIGATTPSTGSPTNK 19 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 QPGQVIGAT(0.003)T(0.061)PS(0.156)T(0.156)GS(0.606)PT(0.018)NK;QPGQVIGATTPS(0.021)T(0.022)GS(0.942)PT(0.014)NK 138.55 3.3583000000000004e-17 5418900.0 943.8299999999999 941.11 1173.5700000000002 1028.77 1502.5700000000002 1272.43 1148.29 739.01 1786.83 1937.31 1373.1100000000001 True False 1103.1254295719664 989.0084791941835 1339.9998728398368 1280.8186961832405 1281.5439434424434 1407.0776980293256 1356.919429293487 843.766930623207 1382.115857981179 1499.670325479771 1032.1288910918956 1.0687865043724947 0.9582218729948594 1.2982873402780564 1.2409484001830957 1.2416510713954436 1.3632771160400028 1.3146802119432908 0.8175015135276184 1.3390923070848544 1.4529874499426718 1.0 10.011407428803063 -3.0040489239421584 12.909788139502105 1.165416046177237 0.5949195999980808 0.0 0.1916756091314644 0.0 0.0 0.023892224983759834 0.0 0.0009907203324351645 3.0040489239421584 -0.5704964461791562 QPGQVIGATTPSTGS(ph)PTNK ddPTM_A549_PD325901_60min_R1 2 QPGQVIGATTPSTGSPTNK 19 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 QPGQVIGATTPS(0.002)T(0.008)GS(0.495)PT(0.495)NK;QPGQVIGAT(0.001)T(0.029)PS(0.015)T(0.086)GS(0.717)PT(0.152)NK 205.24 4.343399999999999e-55 19137600.0 2210.68 2095.65 3066.1 2453.0 3343.4 2034.8899999999999 2193.7 2797.2 2629.5 2561.0 2958.3 True False 2435.106606183399 2272.2577801843136 3274.1839839571007 2604.516238832794 3108.5711181038396 2018.318530505628 2277.182453938701 2741.4076516390496 2518.991259332567 2399.2980229370055 2594.447854208791 0.9385837538546385 0.8758155522371317 1.2619964508616435 1.0038807427205252 1.1981628819638916 0.7779375974858972 0.8777137109325931 1.0566439588260972 0.970916125851666 0.924781748472914 1.0 11.341211824111536 -7.239089980325551 24.985779622313448 0.9697444318794312 1.0542783521063144 0.1628192883021331 0.1233521136105002 1507.3494326916868 1685159.994249761 0.017609235079436257 0.030485449792347758 5.766469770519681e-08 7.239089980325551 0.08453392022688322 QPGS(ph)PMYR ddPTM_A549_MK2206_60min_R1 4 QPGSPMYR 8 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 QPGS(0.917)PMY(0.083)R;QPGS(1)PMYR;QPGS(1)PMYR;QPGS(1)PMYR 77.288 0.0037901 124244000.0 11516.099999999999 10012.9 8846.2 9128.4 11625.099999999999 9887.3 7663.3 7304.000000000001 11878.8 14865.3 14624.9 True False 13459.736138386921 10522.513841446202 10100.724179312485 11364.858409789447 9915.063189676846 10933.567523341433 9055.622414638097 8339.364367561875 9188.270766545682 11507.218405600774 10993.133703293886 1.2243766428815437 0.9571896536010772 0.9188211889286848 1.033814262295762 0.9019323749974936 0.9945815104627895 0.8237525949424912 0.7585975566787786 0.8358190680235781 1.0467641635389964 1.0 13.424315079191036 -6.764767576981603 24.773716804144065 0.9049666665923867 1.0199011588152949 0.23515957647555108 0.10708221966301652 96.84566366151286 720888.6707135065 0.015706725814121438 0.030572063012122813 1.7188280127362197e-07 6.764767576981603 0.11493449222290819 QPGS(ph)PMYR ddPTM_A549_PD325901_60min_R1 4 QPGSPMYR 8 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 QPGS(0.992)PMY(0.008)R;QPGS(0.998)PMY(0.002)R;QPGS(0.999)PMY(0.001)R;QPGS(1)PMYR 78.759 0.0042211 146022000.0 20825.300000000003 21124.8 21539.7 18783.7 25256.600000000002 20764.2 21154.2 21409.6 22696.5 23270.5 25612.7 True False 22939.46912522443 22905.061033492046 23001.51357073833 19943.92648812212 23482.663546539872 20595.103239548567 21959.23465702241 20982.56873249372 21742.64503420482 21801.196658631638 22462.50027228254 1.021234005438408 1.0197022039329966 1.023996139874104 0.8878765162545953 1.0454162832227611 0.9168660206968039 0.9775952984236073 0.9341154581257826 0.967953022622064 0.9705596614074652 1.0 14.45523090077251 QPGS(ph)VPR ddPTM_A549_PD325901_60min_R1 1 QPGSVPR 7 0 Q13443 Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 1 QPGS(1)VPR 65.305 0.025124 24855000.0 4955.8 5156.9 4847.6 4797.4 6553.5 5732.6 5267.9 6210.0 5457.3 6285.6 6339.6 True False 5458.909167732866 5591.490061142121 5176.587286986869 5093.724502314089 6093.204768347643 5685.915606237472 5468.372817205492 6086.136678349244 5227.948659271955 5888.726143292791 5559.869390035507 0.9818412600692412 1.005687304662819 0.9310627505502983 0.9161590219085269 1.0959258825878155 1.0226707153279297 0.9835433952829904 1.0946546135160875 0.9403006244430082 1.0591482875203266 1.0 12.440835276862433 QPGSKYPDIAS(ph)PTFR ddPTM_A549_MK2206_60min_R1 1 QPGSKYPDIASPTFR 15 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 QPGS(0.001)KYPDIAS(0.983)PT(0.016)FR 47.751999999999995 0.0078925 1659400.0 1478.4 1326.8 1435.4 1316.3 1752.8 1299.4 1053.8 982.97 2112.3 1688.1 2447.8 True False 1727.9177765902707 1394.3284527789974 1638.9613039480387 1638.793559090952 1494.9654419201197 1436.9016455280878 1245.261819391857 1122.3090077193729 1633.867422649968 1306.7570375636324 1839.9437041567996 0.9391144808868662 0.757810388235755 0.8907670926264202 0.8906759241538698 0.8125060775189451 0.7809487009204904 0.6767934348092076 0.6099692100273791 0.887998594173689 0.710215771608342 1.0 10.845445910196394 -9.269940975126516 2.162235511772172 0.9628103771980375 0.7962835831238076 0.0 0.120314157833904 0.22621827147990814 2.176130713781535 0.020474987445996837 0.01859743907325197 5.371047892110695e-10 9.269940975126516 -0.16652679407422988 QPGSKYPDIAS(ph)PTFR ddPTM_A549_PD325901_60min_R1 1 QPGSKYPDIASPTFR 15 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 QPGS(0.003)KYPDIAS(0.983)PT(0.014)FR 48.111999999999995 0.0077065 3088200.0 2258.5 2500.2 2475.7 2415.0 3173.1 3066.9 2720.0 2803.6 2679.6 2714.6 2555.8 True False 2487.781257380175 2710.900628452662 2643.7158895934895 2564.1690651370573 2950.2324026007313 3041.9241832274543 2823.511088441113 2747.6799986183482 2566.985730560009 2543.1996927234663 2241.4528025510667 1.109896784152115 1.2094390858318775 1.1794653389911198 1.1439763809519867 1.3162143763379628 1.3571216756227686 1.2596790283639199 1.2258478052676947 1.145233005860504 1.1346211215462454 1.0 11.130218406070584 -9.623674670350924 0.8471149642643451 1.0215394097757897 1.227903835100014 0.3482760191693399 0.07704474319971033 0.2843385391698733 0.43172096779279023 0.02593267141714595 0.016160645541644526 2.3786214428308115e-10 9.623674670350924 0.20636442532422428 QPGTCS(ph)PDLAAPLDENGAVDRGEGGSEDGSEDGLPEGIHLDKNDDGGK ddPTM_A549_MK2206_60min_R1 2 QPGTCSPDLAAPLDENGAVDRGEGGSEDGSEDGLPEGIHLDKNDDGGK 48 2 O75362 O75362 ZNF217 Zinc finger protein 217 1 QPGT(0.102)CS(0.898)PDLAAPLDENGAVDRGEGGSEDGSEDGLPEGIHLDKNDDGGK;QPGT(0.057)CS(0.902)PDLAAPLDENGAVDRGEGGS(0.034)EDGS(0.007)EDGLPEGIHLDKNDDGGK 65.196 2.1141e-05 11953400.0 1115.52 1333.46 1601.03 1225.58 1505.12 1722.21 1380.27 1241.3000000000002 1898.67 1808.1599999999999 1991.78 True False 1303.7925041544772 1401.3274183318383 1828.0801285076825 1525.8471550183774 1283.7188418204069 1904.4531190895236 1631.0471924957292 1417.2580763218177 1468.6242765529598 1399.6954001783415 1497.166055668531 0.8708402780159836 0.9359866349000961 1.221026967306835 1.0191569260078097 0.857432505205434 1.2720386705796147 1.0894230378255645 0.9466271766954856 0.9809361299586595 0.9348965633296663 1.0 10.54801852903997 -4.323523769116397 14.533289720813837 1.0093549830483382 1.022742783961321 0.0 0.12732862931186978 0.0 0.0 0.015546788754469758 0.0 4.747623062933859e-05 4.323523769116397 0.013387800912982861 QPGVDS(ph)LSPVASLPK ddPTM_A549_MK2206_60min_R1 1 QPGVDSLSPVASLPK 15 0 Q9UBW7;A0A087X151;Q9UBW7-2 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 QPGVDS(0.643)LS(0.356)PVASLPK 73.91 0.00075721 1044600.0 1078.4 1247.9 1263.9 1023.8 1820.4 1495.3 1578.5 1203.9 1952.9 1638.7 2043.2 True False 1260.407555651346 1311.412779788146 1443.1400251218658 1274.6310459601277 1552.6215714692983 1653.531653500193 1865.2930175650486 1374.5565117891213 1510.571268140474 1268.5165318734223 1535.817050548726 0.8206755845046908 0.8538860662600383 0.9396562074931074 0.8299367724200742 1.0109417465541017 1.0766462404551436 1.214528134648984 0.895000163787745 0.9835619858503121 0.8259554947773233 1.0 10.584790654376107 -6.770037854405711 24.860029693008947 1.0092623020227924 0.8661432960272641 0.323398509162663 0.09677228067372119 129.1587011863034 373426.5067663241 0.011707684393921345 0.022375907791853205 1.6980956349176672e-07 6.770037854405711 -0.1431190059955283 QPGVDSLS(ph)PVASLPK ddPTM_A549_MK2206_60min_R1 2 QPGVDSLSPVASLPK 15 0 Q9UBW7;A0A087X151;Q9UBW7-2 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 QPGVDS(0.005)LS(0.995)PVASLPK;QPGVDS(0.001)LS(0.999)PVASLPK 180.64 8.0716e-29 14651900.0 6297.6 7019.400000000001 7800.2 5807.8 10420.2 8298.7 7915.200000000001 7434.799999999999 11881.2 9380.599999999999 9405.6 True False 7360.480918462458 7376.657477718497 8906.385650728369 7230.711260722051 8887.402383555476 9176.862925768768 9353.289383991674 8488.70566812008 9190.127170377695 7261.515944890351 7069.929938645799 1.041096726889533 1.0433848060354967 1.2597558572743555 1.022741572189759 1.2570707858043928 1.2980132767095764 1.3229677613726452 1.200677480793542 1.2998894260807918 1.027098713552634 1.0 12.787480202996749 -6.762428983074722 24.999892253504065 1.1818433832308726 1.1002912636735045 0.15605622554206655 0.11621238124371955 61.324785756812005 1549290.367440136 0.02035302522518886 0.04010858914288652 1.7281085420570367e-07 6.762428983074722 -0.08155211955736807 QPGVDSLS(ph)PVASLPK ddPTM_A549_PD325901_60min_R1 2 QPGVDSLSPVASLPK 15 0 Q9UBW7;A0A087X151;Q9UBW7-2 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 QPGVDS(0.012)LS(0.988)PVASLPK;QPGVDSLS(0.999)PVASLPK 139.6 2.5273e-10 21711500.0 4424.3 5251.2 4384.1 3906.0 5298.1 4326.700000000001 4487.4 5341.799999999999 4739.9 5210.3 4512.0 True False 4873.451679002486 5693.737053088001 4681.631389734953 4147.264748830368 4925.979733452754 4291.464789712812 4658.1704625995035 5235.253608438969 4540.698486446258 4881.32076880464 3957.052603924571 1.2315862756459286 1.4388833364107925 1.1831107287003844 1.0480691474045976 1.2448608159940076 1.0845104220895556 1.1771818393264648 1.3230184514723635 1.1474951032854181 1.2335748996521774 1.0 11.950210528875068 -14.999999999052585 0.09433876451878305 0.29948659002771705 1.3709345429528823 0.0 0.12187121612200469 88.45049998637309 0.6052024071345145 12.28442174991573 0.8662287975798036 1.0000000021815028e-15 14.999999999052585 1.0714479529251653 QPGYQPPNPHPGPS(ph)SPPAAPASK ddPTM_A549_MK2206_60min_R1 1 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGY(0.001)QPPNPHPGPS(0.498)S(0.498)PPAAPAS(0.002)K 44.848 0.010579 6592500.0 679.61 515.28 400.34 531.04 891.61 543.63 444.02 506.37 990.16 954.85 1065.6 True False 794.3115531307595 541.5055510611709 457.11423186746396 661.1448238392916 760.4553501086249 601.1565657676117 524.6926865120257 578.149498193087 765.8903409606087 739.1487218278742 800.9821109361404 0.9916720264856044 0.676051991258945 0.5706921860379827 0.8254177150930183 0.9494036629854938 0.750524334513558 0.6550616790914294 0.7218007622135032 0.956189071520563 0.9228030335958451 1.0 9.645626211744645 -8.814459193116098 6.055617528491897 0.9803510499459238 0.7616835528557464 0.3406533271455042 0.1180038774212583 0.1401506636334747 11.03215910126056 0.020605622000423558 0.02197146585439686 1.5329952418563549e-09 8.814459193116098 -0.2186674970901774 QPGYQPPNPHPGPS(ph)SPPAAPASK ddPTM_A549_PD325901_60min_R1 1 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGYQPPNPHPGPS(0.629)S(0.371)PPAAPASK 166.57 1.9295e-34 100180000.0 6715.4 7307.2 7004.4 7860.1 8958.0 6997.0 7955.5 9626.2 8707.5 8477.5 8956.3 True False 7397.142464383811 7923.003388620633 7479.760704878878 8345.600525417713 8328.82098342232 6940.018751847952 8258.250905916642 9434.197889392188 8341.554056146922 7942.229203220801 7854.73187866348 0.9417434711523813 1.0086917683520942 0.9522617474947591 1.0624933676078268 1.0603571340285531 0.8835462316288293 1.0513727309202339 1.201084650008125 1.0619782043491315 1.011139441283158 1.0 12.939346314615106 QPGYQPPNPHPGPSS(ph)PPAAPASK ddPTM_A549_MK2206_60min_R1 3 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGYQPPNPHPGPS(0.198)S(0.802)PPAAPASK;QPGYQPPNPHPGPS(0.182)S(0.817)PPAAPAS(0.001)K;QPGYQPPNPHPGPS(0.152)S(0.848)PPAAPASK 103.85 1.1589e-10 100921200.0 7617.539999999999 9382.4 8718.4 7471.15 11636.5 9497.1 9183.86 8673.6 14027.0 13819.4 14298.6 True False 8903.19452102777 9859.924084529443 9954.800217598286 9301.582085392662 9924.786264778342 10502.076818335232 10852.44848419065 9903.109361785966 10849.906896516171 10697.587942009874 10747.862998715742 0.8283688136043053 0.9173846080572111 0.926212049668644 0.8654354904322937 0.9234194989240421 0.9771316232436272 1.0097308167667756 0.921402641899072 1.009494342997545 0.9953223206592905 1.0 13.391762216328285 -6.983562862898776 0.5231736848893449 1.005176449386772 0.8601450155240394 0.6488149380667652 0.034355698566442446 0.504314019014877 0.23166457958687595 0.007732463200813063 0.032950361974047084 1.0385732609980062e-07 6.983562862898776 -0.14503143386273265 QPGYQPPNPHPGPSS(ph)PPAAPASK ddPTM_A549_PD325901_60min_R1 1 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGYQPPNPHPGPS(0.056)S(0.944)PPAAPASK 193.34 3.788e-51 76597000.0 8139.5 9606.4 8364.1 8730.3 11153.0 9981.3 9869.9 11423.0 10587.0 10660.0 10659.0 True False 8965.816048016799 10415.965041663729 8931.7381234192 9269.550803050126 10369.651755761231 9900.01560208947 10245.504445516512 11195.159303829858 10142.065207284222 9986.925780753018 9348.010572968087 0.9591148809719481 1.114244037312482 0.9554694074958971 0.9916067949104759 1.1092896905516403 1.0590505353853183 1.096009077604569 1.1975980575164542 1.0849437030604485 1.0683477198488094 1.0 13.190443650528653 -6.7405744743049985 24.956631293245227 1.062836283041049 1.00935847925339 0.23330947038563865 0.062264462371167416 419.96108702951165 502314.7002758542 0.009952305480751078 0.020699925446309286 1.8172953933363862e-07 6.7405744743049985 -0.05347780378765887 QPHRPDPGRPVGLEQLR ddPTM_A549_MK2206_60min_R1 2 QPHRPDPGRPVGLEQLR 17 2 Q9BV57 Q9BV57 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 0 ; 114.63 4.9086e-10 9347100.0 664.71 554.63 882.49 549.79 820.6 842.73 671.13 637.7 1534.12 1190.7 932.81 False True 776.8967974007843 582.8582979837321 1007.6403519026784 684.4885746810105 699.8908270422472 931.9071292411 793.0656337525693 728.0959278743443 1186.6442694862326 921.7200430229349 701.1675327536988 1.1080045226134096 0.8312682358446772 1.4370892901235277 0.9762125921501458 0.9981791716646697 1.329079122618836 1.131064398600943 1.0384050799027866 1.6923833663916505 1.314550374862708 1.0 9.453615384075722 QPISCVKEEIQETQT(ph)PTHSR ddPTM_A549_MK2206_60min_R1 1 QPISCVKEEIQETQTPTHSR 20 1 H7BZL0;Q9BYG3 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 QPISCVKEEIQETQT(0.73)PT(0.209)HS(0.06)R 82.486 7.860899999999999e-05 5282600.0 1050.2 1393.1 1367.4 1096.8 2281.4 1538.7 1337.7 1597.8 1729.8 1764.8 1875.0 True False 1227.4480850751518 1464.0028395888012 1561.3178814397024 1365.5160492372222 1945.8090821523053 1701.5242126936034 1580.742774530734 1824.293043057279 1338.0030619229824 1366.1304542931694 1409.3857526325662 0.8709099568960618 1.0387524046232315 1.1078002445557187 0.9688731752017498 1.380607884333841 1.2072806962290892 1.1215827686480393 1.2943887361211897 0.9493519140687712 0.9693091133789304 1.0 10.46085081983135 -8.821183689141542 24.99986503089963 0.9760826679835447 1.1265180348813033 0.19957101234123176 0.13445596378285798 85.0361612093379 35582.6059342171 0.02346221735610635 0.024977435669633407 1.5094415858986722e-09 8.821183689141542 0.1504353668977586 QPISCVKEEIQETQT(ph)PTHSR ddPTM_A549_PD325901_60min_R1 2 QPISCVKEEIQETQTPTHSR 20 1 H7BZL0;Q9BYG3 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 QPISCVKEEIQETQT(0.964)PT(0.034)HS(0.002)R;QPISCVKEEIQETQT(0.99)PT(0.008)HS(0.002)R 128.97 5.902699999999999e-17 22464000.0 2718.0 2552.6 2718.5 2982.9 3316.4 3132.6000000000004 2692.8 3003.9 2933.5 3392.7 3272.5 True False 2993.9293591141527 2767.7165603504795 2902.993757668498 3167.14695834258 3083.467504958895 3107.0891442102215 2795.2759775566988 2943.984857986037 2810.215196521043 3178.484342998196 2870.003246086692 1.0431797814850685 0.9643600801233649 1.011494938769421 1.1035342774127694 1.0743777064235958 1.0826082334390392 0.9739626536548747 1.0257775359662817 0.979167950542505 1.10748458118719 1.0 11.486836653308877 -7.774769072588091 24.998312047635697 0.9920459354373652 1.045110551575345 0.0 0.05076718088474106 221.50503746200252 415406.4890201742 0.006165265136483762 0.00854472664046926 1.6796969259822726e-08 7.774769072588091 0.05306461613797975 QPKS(ph)PGSTPTTPTSSQAPQK ddPTM_A549_MK2206_60min_R1 2 QPKSPGSTPTTPTSSQAPQK 20 1 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 QPKS(0.899)PGS(0.067)T(0.034)PTTPTSSQAPQK;QPKS(0.822)PGS(0.156)T(0.022)PTTPTSSQAPQK 124.14 2.8052e-15 8469900.0 1014.8599999999999 1213.26 1143.69 1459.53 1427.18 1136.93 1265.0900000000001 1402.1599999999999 1639.23 2990.2 2726.5 True False 1186.1435570551964 1275.009751747548 1305.8824395376437 1817.1149155207918 1217.2437125739143 1257.2391779669447 1494.9404774097982 1600.9204739349068 1267.9470223124129 2314.711743215908 2049.4348024281026 0.5787661825835556 0.6221275008294769 0.6371915017694036 0.886641972395479 0.5939411739918559 0.613456537615839 0.7294403684560457 0.7811521850015376 0.6186813168246148 1.1294390728963488 1.0 11.001010379680018 -10.868198296543898 0.7544446717752369 1.0371971328738627 0.6717442599431369 0.6952539786151544 0.09774506994312779 0.43963880281119994 0.3665437204895929 0.1035761771170528 0.016880407474144706 1.3545707813365324e-11 10.868198296543898 -0.3654528729307258 QPKS(ph)PGSTPTTPTSSQAPQK ddPTM_A549_PD325901_60min_R1 2 QPKSPGSTPTTPTSSQAPQK 20 1 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 QPKS(0.539)PGS(0.424)T(0.036)PT(0.001)TPTSSQAPQK;QPKS(0.992)PGS(0.004)T(0.004)PTTPTSSQAPQK 154.14 3.402400000000001e-27 28249000.0 3224.6 3102.3999999999996 2916.0 2987.8999999999996 3771.0 3333.8 3496.8 3438.2 3337.8 2029.03 2281.33 True False 3551.9590181749454 3363.8501358737444 3113.897295332476 3172.455796986755 3506.1379692437563 3306.650638117868 3629.872637522383 3369.6224037842803 3197.5238735121657 1900.9166995235728 2000.7408725423852 1.7753218654754592 1.6813022525996715 1.5563721109848565 1.5856405197317962 1.7524198247564313 1.6527130941829735 1.8142642494776569 1.6841873178221363 1.5981699166514263 0.9501063958912562 1.0 10.966318612272447 -10.376289597641975 0.6243037178179837 0.9634519265090797 1.6896927704971578 0.919000645232207 0.08019474119693601 0.18899852957981578 0.12676675479855068 0.07130421483275332 0.018262442731502473 4.2044617162008384e-11 10.376289597641975 0.7262408439880781 QPKT(ph)PLEK ddPTM_A549_MK2206_60min_R1 1 QPKTPLEK 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 QPKT(1)PLEK 44.299 0.024092 9334300.0 3734.9 3214.3 3035.6 3459.3 4382.5 3709.7 3406.6 2957.7 4883.3 5194.3 4537.4 True False 4365.259810461989 3377.894140614663 3466.0937259751063 4306.82865529388 3737.840055462645 4102.257991700437 4025.5351242553647 3376.9630325763646 3777.2403470276936 4020.9040224019777 3410.63835413067 1.2798952445882057 0.9903993885847351 1.0162595285944853 1.2627632155950577 1.095935618895418 1.2027830469718777 1.180287883463219 0.9901263874800679 1.107487794023376 1.1789300432665946 1.0 11.735826072048827 -10.358448895511511 0.40686084307426584 0.9768139219069347 1.1338088495920904 0.0 0.10813892870352734 2.257855279941943 0.5798102604300828 0.14780055933035363 0.030243111440156414 4.380776578014947e-11 10.358448895511511 0.15699492768515566 QPLFS(ph)PETR ddPTM_A549_PD325901_60min_R1 2 QPLFSPETR 9 0 Q9BQ89 Q9BQ89 FAM110A Protein FAM110A 1 QPLFS(0.984)PET(0.016)R;QPLFS(0.894)PET(0.106)R 53.028 0.022716 13217800.0 2384.1000000000004 2704.1000000000004 3028.8 2105.05 2409.3 2744.5 2751.0 2497.8999999999996 2992.3 2976.6000000000004 3172.3999999999996 True False 2626.132076918342 2931.9839970397757 3234.3525816539827 2235.074157584581 2240.0790796337787 2722.149701936076 2855.6908104049608 2448.0774249353567 2866.544037003552 2788.6569680102675 2782.2149115005104 0.943899792234961 1.053830883056583 1.1625099730019146 0.8033434614794569 0.8051423599141212 0.9784110101214144 1.0264091384891698 0.8799023450043455 1.0303100688427989 1.0023154417306614 1.0 11.442018149467032 QPLLLS(ph)EDEEDTK ddPTM_A549_MK2206_60min_R1 4 QPLLLSEDEEDTK 13 0 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK 198.74 1.9171999999999998e-30 118497000.0 15726.3 17592.199999999997 15269.599999999999 15339.4 24957.0 18882.3 17431.6 18155.3 25763.199999999997 21610.5 21201.8 True False 18380.5149688796 18487.567837638442 17435.0588872544 19097.553688611843 21285.85836033798 20880.41245294368 20598.696081714854 20728.869373274385 19927.876335376455 16728.673040855923 15936.807920088077 1.1533372969696944 1.1600546314130558 1.0940119862571602 1.1983299155246578 1.3356412693854154 1.310200421417157 1.2925233324642476 1.3006914231014854 1.2504308538636337 1.0496878123108777 1.0 13.960075071673959 -10.609073808460804 0.9077071557950441 1.0010590398934969 1.2338985464313985 0.5388501652784456 0.07357134474677565 0.3628324524122773 0.5370687972149284 0.05437702875888841 0.015107283803779396 2.459949499559205e-11 10.609073808460804 0.23283950653790164 QPLLLS(ph)EDEEDTK ddPTM_A549_PD325901_60min_R1 2 QPLLLSEDEEDTK 13 0 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK 178.22 2.9641e-22 173695000.0 11273.099999999999 12255.7 11995.1 11668.3 14196.3 11848.599999999999 11925.7 12701.2 12103.1 13203.1 12909.900000000001 True False 12417.536813182403 13288.530850382896 12809.15961839596 12389.024390368002 13199.200862576274 11752.108929990802 12379.539039493446 12447.86460210135 11594.448796663994 12369.454012744856 11322.064142598803 1.0967555612462863 1.1736844698119437 1.1313449082311784 1.094237255179893 1.1657945668153231 1.0379828962259605 1.093399479421419 1.0994342061061788 1.0240578617674805 1.092508738420346 1.0 13.466849381607865 -8.308759172335703 0.5083852238980755 0.9996901892195267 1.1385620956986082 0.30475446328312494 0.04336151744779675 0.30694517715686753 0.1782079621330747 0.010425241319564205 0.014239101042386485 4.911801729175702e-09 8.308759172335703 0.13887190647908154 QPLLLS(ph)EDEEDTKR ddPTM_A549_MK2206_60min_R1 15 QPLLLSEDEEDTKR 14 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(1)EDEEDTKR;QPLLLS(0.989)EDEEDT(0.011)KR;QPLLLS(1)EDEEDTKR;QPLLLS(0.998)EDEEDT(0.002)KR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR 240.92 1.3159e-57 11034065000.0 79992.8 89808.1 85128.3 76396.29999999999 113371.90000000001 87216.39999999998 82617.69999999998 82897.70000000001 122811.59999999999 126251.69999999998 125813.70000000001 True False 93493.62900380835 94378.94868859011 97200.77300465359 95113.39692956042 96695.04369284758 96445.58155843921 97628.26666916926 94648.70283855886 94994.96868982576 97731.35328438625 94570.68600852702 0.9886110902841336 0.9979725501841066 1.0278108059392679 1.0057386801760586 1.022463173039995 1.0198253351968192 1.0323311671902915 1.000824957852424 1.004486407989686 1.033421215487157 1.0 16.52910544150815 -5.52959168562918 24.974770057826746 1.0083016836418695 0.9909514470021317 0.13631122729510559 0.01373044759959306 171.1065199839339 636587.3546573813 0.0017628161027853312 0.00685898283560064 2.953985195125306e-06 5.52959168562918 -0.01735023663973778 QPLLLS(ph)EDEEDTKR ddPTM_A549_PD325901_60min_R1 11 QPLLLSEDEEDTKR 14 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR 268.18 9.372799999999999e-84 17531244000.0 62019.7 74606.30000000002 68807.7 69870.6 79351.3 62809.0 72487.20000000001 75226.90000000001 84431.2 77087.6 75960.0 True False 68315.89428750984 80893.63473183267 73477.40429631296 74186.3482743541 73777.93843512381 62297.50432825756 75245.74006251784 73726.4404651386 80882.85028140705 72220.27578014789 66617.4015501131 1.0254962321837042 1.2143018618187957 1.1029761381647316 1.11361816204355 1.1074874840265898 0.935153621706396 1.129520790538701 1.1067144432176284 1.2141399754321358 1.084105265285978 1.0 16.023611461513134 -11.163519605545705 1.5722322471390837 1.0002634760501814 1.120683169575398 0.026832114985169242 0.07860249438343882 0.46549920452296356 2.0723086520762 0.057237255227223185 0.012259491451104111 6.862468981683947e-12 11.163519605545705 0.12041969352521664 QPLLLSEDEEDTKR ddPTM_A549_PD325901_60min_R1 2 QPLLLSEDEEDTKR 14 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 0 ; 146.16 4.035e-13 28620000.0 6074.9 6366.2 6360.799999999999 4849.3 7180.6 5072.0 5558.0 6457.6 6578.5 6104.5 6157.8 False True 6691.619375894989 6902.702016180841 6792.482138597678 5148.830247440632 6676.259427725194 5030.695313616242 5769.512731454303 6328.798102110799 6302.028522349983 5719.060828199512 5400.429637510356 1.2390901881984122 1.2781764562278504 1.2577669916145913 0.9534112270767936 1.2362459796445022 0.9315361279173031 1.0683432835381035 1.1719064087331446 1.1669494735339747 1.0590010817798652 1.0 12.398858471799125 -6.224202409086408 21.130996424509128 1.0803116598118787 1.2603284170458817 0.4624415397786672 0.08856052183238074 67.63357853458987 38379.20997442368 0.012872057363312707 0.034052768505326965 5.967570946761028e-07 6.224202409086408 0.180016757234003 QPLPPLHPAVS(ph)DPRSPPSQK ddPTM_A549_PD325901_60min_R1 1 QPLPPLHPAVSDPRSPPSQK 20 1 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 QPLPPLHPAVS(0.569)DPRS(0.372)PPS(0.059)QK 50.531000000000006 0.0058647 4310900.0 971.98 905.91 956.69 1169.2 1182.4 1000.9 837.99 1290.3 1327.9 1157.2 1321.4 True False 1070.654694066143 982.2542149914212 1021.6167364443162 1241.418828554139 1099.352303058557 992.7490022473377 869.8801680157227 1264.5639542792321 1272.0929808966407 1084.134194511012 1158.8761770447531 0.923873244850383 0.8475920330817956 0.8815581480409219 1.0712264633136888 0.9486365539604172 0.8566480370482238 0.7506239106873365 1.0911985070777734 1.0976953414821258 0.935504772628651 1.0 10.178510710966187 -8.294800731850973 24.929813558234724 1.0508027979722736 0.9017744369330041 0.35655322853017746 0.0849229699374189 448.44318527131486 335105.2953940531 0.013863747389105282 0.01676095429845886 5.072233851448794e-09 8.294800731850973 -0.14902836103926953 QPLPPLHPAVSDPRS(ph)PPSQK ddPTM_A549_MK2206_60min_R1 2 QPLPPLHPAVSDPRSPPSQK 20 1 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 QPLPPLHPAVS(0.061)DPRS(0.919)PPS(0.02)QK;QPLPPLHPAVS(0.386)DPRS(0.601)PPS(0.014)QK 52.321000000000005 0.0049492 5101500.0 1405.96 1880.26 1864.48 1688.33 2079.55 1354.7 1406.1 1565.17 2447.3 2275.2 3271.1000000000004 True False 1643.2516755782312 1975.9572027602026 2128.8912999756453 2101.9709257920126 1773.6509497632278 1498.053454822918 1661.5701691467925 1787.0376406320945 1892.9904575350408 1761.2307398049736 2458.795592232741 0.668315691133176 0.8036280888912402 0.8658268734093826 0.8548782714724532 0.721349491338823 0.6092631122144607 0.6757658808221558 0.7267939011592874 0.7698852493126874 0.7162981523834868 1.0 11.263736088595786 -10.345279470665213 0.7663451312749856 0.9977845830302234 0.7450533472997952 0.0 0.11032492998416069 0.3744257661634704 0.40722586692129004 0.052537191683321376 0.016727995368851816 4.515652663574261e-11 10.345279470665213 -0.2527312357304282 QPLPPLHPAVSDPRS(ph)PPSQK ddPTM_A549_PD325901_60min_R1 1 QPLPPLHPAVSDPRSPPSQK 20 1 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 QPLPPLHPAVS(0.083)DPRS(0.8)PPS(0.118)QK 57.61 0.0022432 5507800.0 1218.8 1188.5 1459.6 1105.4 1538.2 1320.1 1202.1 1326.0 1604.1 1210.6 1290.2 True False 1342.5316787668621 1288.6590660411132 1558.65723328782 1173.6780474544532 1430.1621385019218 1309.34954327776 1247.8465733143596 1299.5518897731235 1536.6852554080128 1134.162509397711 1131.5135792516573 1.1864918843084187 1.1388807785173787 1.3774975942565888 1.0372637756859109 1.2639372295008426 1.1571664426190245 1.1028118408792238 1.1485075509501184 1.3580793757900118 1.002341050248646 1.0 10.14403818309939 -11.111110143102348 1.4698920978326941 1.0004768363121483 1.2144583029990585 0.35566203024749543 0.09902563461042822 0.3587294196590188 1.3913349933198722 0.07417748173333545 0.016252003420827464 7.74265408456831e-12 11.111110143102348 0.2139814666869102 QPLSEASNQQPLS(ph)GGEEK ddPTM_A549_MK2206_60min_R1 2 QPLSEASNQQPLSGGEEK 18 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 QPLSEASNQQPLS(1)GGEEK;QPLSEASNQQPLS(1)GGEEK 202.07 8.2897e-49 18534700.0 3018.2 3352.2 3206.0 3120.8 5322.5 3011.2 3177.8 3034.9 4631.4 4286.3 5176.1 True False 3527.5983720946674 3522.812661596137 3660.6590082607017 3885.3961400980347 4539.567300673116 3329.8431853272114 3755.1651258905354 3465.1063689914486 3582.3952948260517 3318.0218530353636 3890.7315169074313 0.9066671284732075 0.905437100012561 0.9408665163229757 0.9986286957128212 1.1667644711402279 0.8558398776315347 0.9651565803428525 0.8906053666087211 0.9207510925024037 0.852801546088873 1.0 11.925825714063004 -6.512240609957189 0.0039512422947875995 1.897139331924185 3.334633482449476e-07 0.0 0.08659342194496127 100939.80577385433 91.1532852367798 21466.819520950543 22303.066989724626 3.074393052515462e-07 6.512240609957189 -1.8971389984608367 QPLSEASNQQPLS(ph)GGEEK ddPTM_A549_PD325901_60min_R1 1 QPLSEASNQQPLSGGEEK 18 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 QPLSEASNQQPLS(1)GGEEK 225.6 4.755299999999999e-64 16178000.0 2635.7 3203.9 3313.3 2438.5 3574.0 2230.6 3355.2 3832.3 3120.1 2845.2 2918.5 True False 2903.2743237002105 3473.9038970880288 3538.1604624914585 2589.1206067646854 3322.9745696306513 2212.4347331530735 3482.8839720358883 3755.8617701188077 2988.9730474400244 2665.5535864351295 2559.543001895802 1.1342940210614996 1.3572359966271237 1.3823406990508909 1.011555814786849 1.2982687015492185 0.8643866235161385 1.3607444647174072 1.4673954558829123 1.1677760620650455 1.041417778275578 1.0 11.321670529358514 -9.905330083636288 1.056939784198389 1.0245275491367394 1.2285565893499482 0.17863433386123762 0.1689838136681838 0.5341590886535216 1.212506394135738 0.05514885607958921 0.032044134391423215 1.2435690832094121e-10 9.905330083636288 0.20402904021320878 QPLTS(ph)PGS(ph)VSPSRDSSVPGSPSSIVAK ddPTM_A549_PD325901_60min_R1 1 QPLTSPGSVSPSRDSSVPGSPSSIVAK 27 1 Q08495-2;Q08495;E5RGQ0;E5RJ61;A0A087WT94 Q08495-2 DMTN Dematin 2 QPLT(0.165)S(0.778)PGS(0.846)VS(0.186)PS(0.01)RDS(0.007)S(0.006)VPGS(0.001)PSSIVAK 64.914 0.00013518 9381500.0 1430.8 1716.8 1709.6 1596.4 2155.9 1528.7 1426.9 1780.3 1539.3 2026.0 1878.4 True False 1576.0537627007109 1861.4807611101248 1825.623736659947 1695.0060023125461 2004.4770214512364 1516.2507740388694 1481.201460329641 1744.790519881668 1474.608574059942 1898.0780142406759 1647.3687081586693 0.956709785062222 1.129972150066379 1.108205908985925 1.028917202274118 1.2167749766788527 0.920407657696524 0.8991317201752848 1.059137830675375 0.8951296493352552 1.1521877311620388 1.0 10.685947774698965 -7.292317362494291 24.997207426149366 0.952221554803373 1.088268660673178 0.16615873572811735 0.09547554660109932 468.55701411758963 379318.3726155947 0.010942426029420744 0.01749392554775926 5.101320826009339e-08 7.292317362494291 0.13604710586980495 QPLTSPGS(ph)VSPSRDSSVPGSPSSIVAK ddPTM_A549_MK2206_60min_R1 1 QPLTSPGSVSPSRDSSVPGSPSSIVAK 27 1 Q08495-2;Q08495;E5RGQ0;E5RJ61;A0A087WT94 Q08495-2 DMTN Dematin 1 QPLT(0.001)S(0.003)PGS(0.556)VS(0.355)PS(0.079)RDS(0.003)S(0.003)VPGSPSSIVAK 104.48 6.069e-13 11014000.0 787.55 1089.1 1370.1 1348.2 1870.1 1414.6 1725.3 1604.3 2085.2 2256.1 2613.8 True False 920.4691862511287 1144.5305380777863 1564.4007820392985 1678.5090605229973 1595.0107673064908 1564.2920330645163 2038.7646773550682 1831.714437962695 1612.9055293801619 1746.4454430705 1964.7213227898692 0.4684985985412317 0.5825409053191184 0.7962456374311027 0.8543242448957312 0.8118254476118801 0.7961902865915099 1.0376864411793825 0.9323024169970798 0.820933488465359 0.8889023714521399 1.0 10.94010897895719 -4.990679582922338 0.5980725413789683 0.919641426472257 3.1027264665825572e-15 0.8111916421176629 0.0692486217389375 1.5899315347960687 0.3072898065418862 0.014382737293999477 1.0811766768120838 1.0216929981180028e-05 4.990679582922338 -0.9196414264722539 down QPLTSPGSVS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 QPLTSPGSVSPSR 13 0 Q08495-2;Q08495;E5RGQ0;E5RJ61;A0A087WT94 Q08495-2 DMTN Dematin 1 QPLTS(0.001)PGS(0.07)VS(0.921)PS(0.009)R;QPLTSPGS(0.034)VS(0.945)PS(0.02)R 107.35 2.1707e-10 8058200.0 3145.5 3561.7 3597.9 3530.9 4657.3 3861.2 3559.7 3937.0 5073.1 5463.0 5941.2 True False 3676.3834999084797 3742.97531674929 4108.136321216839 4395.970658508123 3972.2173394880056 4269.789621142873 4206.451412496864 4495.08180655683 3924.0509500760113 4228.904505781719 4465.836071221659 0.8232240147818012 0.8381354033278194 0.9199030720563443 0.984355580545431 0.8894677897125273 0.9561008404804353 0.9419180071574282 1.006548770458377 0.878682264081082 0.9469457540175393 1.0 12.1247145793567 -5.7980016016261215 3.4365474636911095 0.9456557042472219 0.826109967245648 0.5883672373545534 0.03813449757091723 0.14917634278980726 3.5743855864800644 0.006603867680256529 0.02616227011769319 1.5922028551865894e-06 5.7980016016261215 -0.11954573700157389 QPLTSPGSVS(ph)PSRDSSVPGSPSSIVAK ddPTM_A549_MK2206_60min_R1 1 QPLTSPGSVSPSRDSSVPGSPSSIVAK 27 1 Q08495-2;Q08495;E5RGQ0;E5RJ61;A0A087WT94 Q08495-2 DMTN Dematin 1 QPLTS(0.001)PGS(0.025)VS(0.806)PS(0.167)RDSSVPGSPSSIVAK 156.5 2.2316999999999996e-41 11590000.0 1537.3 1552.7 1508.5 1748.8 2160.2 1981.2 2034.3 2165.9 3094.0 2345.9 3060.8 True False 1796.7586566235293 1631.7257978820842 1722.4279831445017 2177.256078506615 1842.4374415996358 2190.849268985877 2403.9059775942846 2472.9229577905635 2393.213940102733 1815.9595607016913 2300.7188862174726 0.7809553211333499 0.7092243244739668 0.7486477350461022 0.946337291161269 0.8008094568340418 0.9522455273046295 1.0448499345117552 1.0748479410521141 1.0402026751027058 0.789300931800166 1.0 11.167869003019495 -6.902252630760705 0.8975431984591803 1.0268478321605754 0.7397897743906973 0.5033238770627387 0.0905620086134765 0.18878617134622935 0.2887090298853565 0.009455171791065706 0.030108472554470266 1.2524124299058397e-07 6.902252630760705 -0.28705805776987814 QPLTSPGSVS(ph)PSRDSSVPGSPSSIVAK ddPTM_A549_PD325901_60min_R1 2 QPLTSPGSVSPSRDSSVPGSPSSIVAK 27 1 Q08495-2;Q08495;E5RGQ0;E5RJ61;A0A087WT94 Q08495-2 DMTN Dematin 1 QPLT(0.001)S(0.046)PGS(0.033)VS(0.896)PS(0.024)RDSSVPGSPSSIVAK;QPLTS(0.007)PGS(0.359)VS(0.628)PS(0.007)RDSSVPGSPSSIVAK 171.5 6.889e-49 60049000.0 7345.4 6588.799999999999 7888.6 7239.299999999999 8934.3 6854.8 7033.4 7220.5 6864.4 5564.9 6195.9 True False 8091.099600602319 7144.061299395614 8423.967834005407 7686.455119356813 8306.785589661758 6798.9767815017 7301.059885824159 7076.481463127326 6575.9131395940185 5213.531264288227 5433.843579046153 1.4890196014848511 1.314734440819084 1.550277940736037 1.4145521503410814 1.528712681699961 1.2512279167769458 1.3436271728502303 1.3022976020906216 1.2101771138484525 0.9594555287517866 1.0 12.407757320780963 -9.054801379788477 0.36954292634955027 0.979131782729855 1.4768038342293153 0.8263438090590113 0.07765381866268618 0.30815744767980646 0.11346755099295447 0.054985544126599714 0.039108228267047976 8.814519039992231e-10 9.054801379788477 0.49767205149946026 QPPAS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 QPPASPPR 8 0 Q9BWN1;H3BND2;H3BQL8 Q9BWN1 PRR14 Proline-rich protein 14 1 QPPAS(1)PPR 87.149 0.0027177 10699000.0 1530.5 1513.5 1183.0 1484.1 1352.7 1316.3 1195.0 1410.7 1967.3 2166.9 1768.3 True False 1788.8109828675674 1590.5306853188224 1350.7671886376836 1847.7045666237798 1153.7196219108546 1455.5899923107752 1412.1160316694536 1610.6710450875603 1521.7096911325489 1677.3957850225902 1329.1823074027557 1.3457980691624867 1.1966234251392842 1.0162392179874145 1.3901062001300823 0.8679920094371719 1.0951018413380946 1.0623945442282872 1.2117758686051414 1.144846483930406 1.2619757091863866 1.0 10.376323279379914 -2.000000005142452 0.627701960079327 1.0780023271105035 21.182651403200392 0.14998770951122864 0.13755323929655117 175.22952107210298 1.128637245487891 0.020180014971651557 4882.194421620153 0.009999999881590673 2.000000005142452 20.10464907608989 QPPAT(ph)TPPFK ddPTM_A549_MK2206_60min_R1 2 QPPATTPPFK 10 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4;Q63HN8-5 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 QPPAT(0.659)T(0.341)PPFK;QPPAT(0.635)T(0.365)PPFK 79.20100000000001 0.0013532 17536800.0 7786.0 8100.9 7904.5 7300.700000000001 10166.4 7476.9 7521.5 7852.299999999999 10954.3 11929.5 10972.6 True False 9100.086450576197 8513.201208258499 9025.476959075713 9089.371827740873 8670.936027348649 8268.100595235464 8888.059190127024 8965.387571660205 8473.168540422554 9234.617664602425 8247.800591645924 1.1033349254095135 1.0321783502963682 1.0942889390678876 1.1020358369172218 1.05130282079459 1.0024612626559015 1.077627798025283 1.0870034346782238 1.0273246117279922 1.1196460877044037 1.0 13.009793737528 -9.163509192403287 0.3317650266031309 0.9903924243052309 1.080242323726504 0.0 0.047052576030364654 0.9262095075487573 0.2813674182930471 0.030780571523902 0.0196645666329419 6.862633526080733e-10 9.163509192403287 0.08984989942127308 QPPATT(ph)PPFK ddPTM_A549_PD325901_60min_R1 1 QPPATTPPFK 10 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4;Q63HN8-5 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 QPPAT(0.106)T(0.894)PPFK 69.554 0.0037595 14991000.0 3378.9 3391.3 3619.6 3868.4 3705.7 3742.6 3725.5 3856.2 3771.7 3698.7 3616.4 True False 3721.9234405852885 3677.0967527683874 3865.2478224229903 4107.342282226168 3445.4244159709856 3712.1215064550747 3867.2759411718234 3779.285065869623 3613.1885654400617 3465.1634507759077 3171.605726248409 1.173513911197226 1.1593801594998088 1.21870375956064 1.2950355866221153 1.0863344038814269 1.1704233838819633 1.2193432207433614 1.1915998998841568 1.1392300548384955 1.0925580762129403 1.0 11.630997720224615 -10.070902259312057 0.5260018268183146 0.9892143960402076 1.194721639194446 0.4640622444109851 0.05517425866425183 0.43795440136952535 0.22740938782196982 0.04123349135701234 0.012810260191474755 8.493716099177231e-11 10.070902259312057 0.2055072431542384 QPPGTQQSHS(ph)SPGEITSSPQGLDNPALLR ddPTM_A549_MK2206_60min_R1 1 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGT(0.085)QQS(0.264)HS(0.325)S(0.325)PGEITSSPQGLDNPALLR 76.85300000000001 2.8284e-06 15642000.0 1701.6 1657.9 1701.1 977.99 2427.9 1713.3 1494.1 1763.5 2873.6 2376.3 2820.5 True False 1988.7884798741934 1742.280028536555 1942.341559248997 1217.5975939036389 2070.7591262196815 1894.6002688035042 1765.5586300563434 2013.481525492247 2222.734188196255 1839.4921795879748 2120.0920081600834 0.9380670613442662 0.821794536194959 0.9161590873287869 0.5743135624384188 0.9767307825554159 0.8936405880081253 0.8327745320773031 0.9497142188841332 1.0484140214863833 0.8676473344118558 1.0 11.049911161165609 -8.460946667778172 3.203512857760675 1.022650183859274 0.8478475747843474 0.16614161104868042 0.10988902117885489 0.18619149341550842 3.7795726676049877 0.016114883864220293 0.01928498979685248 3.4598186247486423e-09 8.460946667778172 -0.17480260907492673 QPPGTQQSHSS(ph)PGEITSSPQGLDNPALLR ddPTM_A549_MK2206_60min_R1 1 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGT(0.001)QQS(0.003)HS(0.057)S(0.939)PGEITSSPQGLDNPALLR 98.75 1.2724e-10 15763000.0 1524.2 1184.0 1530.6 1465.9 1976.3 1179.8 1218.7 1107.3 2374.9 2071.8 2215.0 True False 1781.447696887778 1244.2605427271124 1747.66209545971 1825.0455658067524 1685.5888879887802 1304.6456529121424 1440.1220148916839 1264.263165964028 1836.9889419360002 1603.7789410724092 1664.9543691099402 1.069967880164856 0.7473241103852447 1.0496756715284539 1.096153504064135 1.0123934440857205 0.7835924377973112 0.8649618521746946 0.759338027167606 1.1033268995342058 0.9632569942020487 1.0 10.701266923003127 -8.808392532941825 24.999653872601808 1.048793268534602 0.9234765186783002 0.10299430114479768 0.12385604638708299 154.48070468137325 82250.72435421633 0.021638314739486488 0.023035049913038223 1.554559922214304e-09 8.808392532941825 -0.1253167498563018 QPPGTQQSHSS(ph)PGEITSSPQGLDNPALLR ddPTM_A549_PD325901_60min_R1 2 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGTQQSHS(0.119)S(0.881)PGEITSSPQGLDNPALLR;QPPGTQQSHS(0.018)S(0.982)PGEITSSPQGLDNPALLR 157.65 3.4251999999999998e-46 51014000.0 3490.1 3774.8 3986.1000000000004 3799.1000000000004 4347.9 3909.7999999999997 3428.8 3889.1 3530.0 3840.5 4230.9 True False 3844.4123827241774 4092.9156436617536 4256.620716366527 4033.761778617887 4042.5185034407127 3877.959885090058 3559.284860311352 3811.5288495600703 3381.646375905669 3598.0101745761704 3710.5261218848555 1.0360828239557875 1.10305533749555 1.1471744374095036 1.0871131602676432 1.0894731287829376 1.04512399527864 0.959239941559372 1.0272205946966648 0.9113657375865276 0.9696765516229462 1.0 11.857408048224961 -7.582102274831678 1.711028946030605 0.9618450193550764 1.098238286441595 0.6966775878897997 0.03697170301622118 0.15643880412232183 0.9233576407133831 0.006956208062769143 0.011555470122700915 2.6175665078715183e-08 7.582102274831678 0.13639326708651855 QPPGVPNGPSS(ph)PTNESAPELPQR ddPTM_A549_MK2206_60min_R1 1 QPPGVPNGPSSPTNESAPELPQR 23 0 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 QPPGVPNGPS(0.354)S(0.639)PT(0.007)NESAPELPQR 88.51700000000001 3.7169e-07 18576000.0 761.88 891.62 859.14 850.05 1155.0 1162.0 799.06 869.46 1557.3 1116.2 1182.4 True False 890.4667178223734 936.9996495830646 980.9789707913604 1058.3122881601944 985.1010300192481 1284.9620687268264 944.2388587998274 992.7086176095764 1204.5740364970861 864.0496447654323 888.7774474201321 1.0019006674923456 1.0542567796954208 1.1037397198127192 1.190750610551802 1.1083776179050402 1.4457635850872514 1.0624019112328784 1.1169372270765048 1.3553157092291457 0.9721777338899883 1.0 9.795678398819534 -5.8365322819270675 1.6349740844466465 1.177278292837902 1.0043535505365229 0.10833612152130723 0.13474543216241278 0.7123175647554177 3.320991810351855 0.021372834966898336 0.13757800811677823 1.4570273971135924e-06 5.8365322819270675 -0.1729247423013791 QPPKDST(ph)TPEIK ddPTM_A549_PD325901_60min_R1 1 QPPKDSTTPEIK 12 1 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 1 QPPKDS(0.075)T(0.463)T(0.463)PEIK 74.296 0.00052976 17573000.0 5046.6 5327.9 5984.0 5361.9 6338.8 5257.2 5782.3 6321.1 5462.7 6142.9 7355.7 True False 5558.927116889435 5776.900831266673 6390.11022471521 5693.092385241567 5893.584555672851 5214.387106219103 6002.348590695968 6195.020701692978 5233.121716050962 5755.036245646129 6450.995531624108 0.8617161629764631 0.8955053220773626 0.9905618742703471 0.8825137697480733 0.913593030220109 0.8083073504945251 0.9304530690296126 0.9603201042883555 0.8112114929233981 0.8921159869718955 1.0 12.655306102207119 -11.11020689088617 1.4631887181363683 0.9998390527400106 0.8867244267705824 0.0 0.06173331479807499 0.3772288860892267 1.44776988175422 0.04115108216803374 0.008986954350433372 7.758774130903006e-12 11.11020689088617 -0.11311462596942823 QPPKDSTT(ph)PEIK ddPTM_A549_PD325901_60min_R1 1 QPPKDSTTPEIK 12 1 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 1 QPPKDS(0.004)T(0.027)T(0.969)PEIK 82.65100000000001 0.00025013 16594000.0 3536.1 3638.7 3859.9 3513.7 5014.3 3476.2 4565.9 4072.8 3924.4 4626.0 4577.1 True False 3895.0822688607655 3945.34601901876 4121.856025464277 3730.733268808312 4662.112866395905 3447.8909797304364 4739.657823056347 3991.564808950209 3759.471115468616 4333.913570521902 4014.145716627471 0.9703390319704841 0.9828606875620566 1.0268326853184842 0.9293965720663298 1.1614209337454822 0.8589351815128476 1.1807388564455064 0.9943746666734776 0.936555715926321 1.079660250640599 1.0 11.970877273270968 -8.524588164653228 24.993187828060147 0.9697994062213956 1.0166475480535073 0.0 0.09431456343505573 127.54857449769963 1864846.639015004 0.013606853732490907 0.015486061504116983 2.9882149579732716e-09 8.524588164653228 0.04684814183211172 QPPKEPSEVPT(ph)PK ddPTM_A549_MK2206_60min_R1 1 QPPKEPSEVPTPK 13 1 P17096-2 P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 QPPKEPS(0.001)EVPT(0.999)PK 71.558 0.00086431 6752500.0 3800.5 4183.8 4546.3 3230.2 4906.5 3755.5 3948.4 3855.7 5101.0 5312.4 5691.8 True False 4441.931486695971 4396.737549545352 5191.03370220076 4021.5991450091874 4184.760349601248 4152.904517300856 4665.773171082571 4402.257282586022 3945.631644623154 4112.325150377963 4278.368974311491 1.038230109036073 1.027666752434065 1.2133207148259442 0.9399841783530077 0.9781204881410895 0.9706746992220732 1.090549505920869 1.0289569013374933 0.9222279958352859 0.9611899242607402 1.0 12.062845193171293 -6.30165286861241 24.994922200422522 0.9766654045524428 1.0865321644698345 0.3588262466484593 0.0623104537188405 397.2584548811578 246917.51554560725 0.009122721306057681 0.021199578030170717 4.992834050165939e-07 6.30165286861241 0.1098667599173917 QPPMFS(ph)PLISAR ddPTM_A549_MK2206_60min_R1 2 QPPMFSPLISAR 12 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3;F8W719;E7EPJ2 A0A087WVF7 ITSN2 Intersectin-2 1 QPPMFS(0.731)PLIS(0.269)AR;QPPMFS(0.999)PLIS(0.001)AR 64.65 0.006333 4837500.0 1487.18 1187.43 1059.24 796.9399999999999 1490.1999999999998 1499.1100000000001 1345.24 1490.4099999999999 2198.96 1753.82 2058.49 True False 1738.1796259398816 1247.8651150763983 1209.4561596725105 992.1903357759954 1270.9935540560036 1657.7448251713197 1589.652694931393 1701.6801816891968 1700.8990710175526 1357.6308439191096 1547.3101215661927 1.1233556878568662 0.8064738268585129 0.7816507775754059 0.6412356010259255 0.8214213403900568 1.071372055327438 1.0273652791221588 1.0997667228898822 1.0992619044564231 0.8774135352678433 1.0 10.595546664387745 -7.258133895154945 23.74015601066166 1.0522783044095123 0.8195428631761137 0.37497930759750686 0.12227554649912742 91.6553171118941 658268.8886794639 0.016413357365641916 0.027676595486284244 5.519072572879019e-08 7.258133895154945 -0.23273544123339862 QPPMFS(ph)PLISAR ddPTM_A549_PD325901_60min_R1 2 QPPMFSPLISAR 12 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3;F8W719;E7EPJ2 A0A087WVF7 ITSN2 Intersectin-2 1 QPPMFS(0.992)PLIS(0.008)AR;QPPMFS(0.999)PLIS(0.001)AR 43.798 0.024053 8689300.0 5096.5 4899.299999999999 5194.5 4239.4 5432.799999999999 5375.6 5341.1 5419.6 4966.799999999999 5236.6 5408.1 True False 5613.892928155 5312.181205094843 5547.030007066031 4501.258109624034 5051.218870142531 5331.822895874497 5544.358483262069 5311.501826406051 4758.062668512258 4905.960182316256 4742.937984770494 1.183631948421238 1.1200191151881347 1.1695345848664827 0.9490442683580324 1.0649978739679757 1.124160364945716 1.1689713213761017 1.119875875135034 1.0031888849886565 1.0343715642222655 1.0 12.211565289565089 -8.765269444342106 24.444897128248027 1.0015058504555847 1.1099144574592583 0.33830889417346854 0.06169042618835137 55.63368807480245 355074.11712557747 0.010728783388228318 0.011638175042363723 1.7168428955285903e-09 8.765269444342106 0.10840860700367361 QPPT(ph)PPPR ddPTM_A549_MK2206_60min_R1 2 QPPTPPPR 8 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 QPPT(1)PPPR;QPPT(1)PPPR 63.184 0.010609 6946300.0 2427.3 3242.3 3120.9 2605.3999999999996 3397.4 2670.8999999999996 2781.9 2505.4 4335.7 3938.8999999999996 4205.5 True False 2836.968898212641 3407.3192210169923 3563.490548621593 3243.72311696085 2897.6469605085676 2953.53286520007 3287.3352205031397 2860.5481224657065 3353.6708726901825 3049.0997543151416 3161.158284104674 0.8974460128990813 1.0778704875836478 1.1272736852627645 1.0261185380280826 0.9166408955473295 0.9343198282893294 1.039914779665708 0.9049050586455818 1.0608993828475861 0.9645514334562116 1.0 11.626237559694346 -5.240995831490853 23.428685548988966 1.0176014280675467 0.8974457360135195 0.15040925962842377 0.06813018601715096 2600.433909907379 2980036.2399958014 0.009309353157956082 0.4900181857309048 5.741219728028092e-06 5.240995831490853 -0.12015569205402721 QPPTAAGRPVDAS(ph)PR ddPTM_A549_MK2206_60min_R1 3 QPPTAAGRPVDASPR 15 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 QPPT(0.081)AAGRPVDAS(0.919)PR;QPPTAAGRPVDAS(1)PR;QPPTAAGRPVDAS(1)PR 104.45 1.5692e-06 118068700.0 6351.610000000001 6499.26 6741.95 5731.219999999999 9820.1 6937.04 6423.799999999999 6574.84 11437.2 8970.08 9579.95 True False 7423.606486044732 6830.044573416061 7698.059887942371 7135.369157284244 8375.57629860781 7671.112968365532 7590.921308985967 7506.843704603028 8846.692461455395 6943.732698008879 7200.984021830589 1.0309155614759369 0.9484876723389494 1.0690288805814372 0.9908880696933327 1.163115523269641 1.065286764296337 1.0541505558092115 1.042474706490834 1.2285393822060509 0.9642755319214952 1.0 12.813978350441042 -6.743499156563209 24.996571257602763 1.1009750714988107 1.0096769144036397 0.07746530669306029 0.0762628209650385 319.2922623868192 444875.6581291519 0.012506585565073818 0.025992560338090977 1.805098242782351e-07 6.743499156563209 -0.09129815709517097 QPPTAAGRPVDAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QPPTAAGRPVDASPR 15 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 QPPTAAGRPVDAS(1)PR;QPPT(0.27)AAGRPVDAS(0.73)PR 73.432 0.00021855 130464000.0 12455.3 12238.400000000001 11918.8 10720.5 14229.5 11423.3 11290.7 11094.4 13516.300000000001 12302.2 14730.8 True False 13719.752886892764 13269.772918668532 12727.681441566774 11382.680936977978 13230.069009110053 11330.27243218304 11720.373767008106 10873.113488611574 12948.256915199381 11525.43699249341 12919.00498623495 1.061982165152115 1.0271513117927675 0.9851905355813371 0.8810803114563461 1.0240780170923798 0.8770236132159801 0.9072195404751394 0.8416370688142586 1.002264255567329 0.8921303927642749 1.0 13.657207338381307 -4.041127005942819 15.691959958266047 0.9764738922909671 0.966224542592124 0.0 0.075391024375919 0.0 0.0 0.009611507299395253 0.0 9.096472146886315e-05 4.041127005942819 -0.010249349698843169 QPPVS(ph)PGTALVGSQK ddPTM_A549_MK2206_60min_R1 2 QPPVSPGTALVGSQK 15 0 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 QPPVS(0.955)PGT(0.045)ALVGSQK;QPPVS(0.973)PGT(0.026)ALVGSQK 126.63 4.5934e-08 11234400.0 3712.3999999999996 4486.4 3983.7999999999997 3819.0 4239.0 3803.5 3123.5 4116.700000000001 5232.5 5424.5 5625.200000000001 True False 4338.962360534173 4714.738597036246 4548.762743951648 4754.655171441422 3615.4487153693462 4205.983845441034 3690.9995187611203 4700.254831865002 4047.3471045855063 4199.1016825211345 4228.307592377981 1.0261699901766042 1.115041537076232 1.0757880415680556 1.1244818565262953 0.8550581140044342 0.9947204061083001 0.8729259728915131 1.1116161086146528 0.9572026197624135 0.9930927660254677 1.0 12.045864615464279 -6.728469920022307 24.999999825804732 0.9752282327970947 1.0868053073559831 0.3997661657010564 0.06819811128623504 145.81053374946853 110564.18450130346 0.0089289351073585 0.018586105499304287 1.8686590992951293e-07 6.728469920022307 0.11157707455888843 QPPVSPGTALVGSQKEPSEVPT(ph)PK ddPTM_A549_MK2206_60min_R1 2 QPPVSPGTALVGSQKEPSEVPTPK 24 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 QPPVSPGTALVGSQKEPS(0.004)EVPT(0.996)PK;QPPVSPGTALVGSQKEPS(0.13)EVPT(0.869)PK 97.771 2.7224e-08 11033200.0 3204.7 3749.2 3284.1 2940.6 4247.9 3028.7 2511.0 3087.1 5110.799999999999 5105.0 5290.2 True False 3745.5750126074404 3940.0182658720337 3749.8347626416007 3661.047132008551 3623.0395371591026 3349.1950237116503 2967.216197089536 3524.705878847242 3953.2119602705393 3951.7769544235184 3976.4973379076305 0.9419282082503045 0.9908263305779574 0.9429994399580571 0.9206713398518043 0.9111132811836581 0.8422475206468876 0.7461884027441189 0.8863845689638726 0.9941442491573894 0.9937833773335003 1.0 11.957282489767028 -8.766327720436472 23.82958413375618 0.99723480116656 0.8967041158012556 0.34680421829721264 0.059989108260821725 58.472239994953355 285038.24413837487 0.011497644679421704 0.01243711405669864 1.7126644360042806e-09 8.766327720436472 -0.1005306853653044 QPPVSPGTALVGSQKEPSEVPT(ph)PK ddPTM_A549_PD325901_60min_R1 4 QPPVSPGTALVGSQKEPSEVPTPK 24 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 QPPVSPGTALVGSQKEPS(0.002)EVPT(0.998)PK;QPPVSPGTALVGSQKEPS(0.005)EVPT(0.995)PK;QPPVS(0.002)PGT(0.002)ALVGS(0.002)QKEPS(0.059)EVPT(0.936)PK;QPPVS(0.001)PGT(0.001)ALVGS(0.001)QKEPS(0.033)EVPT(0.963)PK 103.18 4.2766e-11 38589000.0 6941.599999999999 6938.300000000001 6377.400000000001 5786.3 8747.1 7607.9 7849.9 8441.4 8635.9 8379.0 9793.5 True False 7646.306121864167 7523.01489096597 6810.208714421585 6143.706609359239 8132.733871856818 7545.943784791205 8148.632240130107 8273.029654849806 8272.963155151208 7849.948510030917 8588.961586111545 0.8902480288453422 0.875893414534625 0.7929024534739769 0.7153026064633572 0.9468820870042715 0.8785629914788636 0.9487331103339132 0.9632165159787646 0.9632087735179408 0.9139578086743778 1.0 13.068268003322057 -7.570341200173742 1.0942896522151084 0.9823109404876834 0.828728078033042 0.4770240785652483 0.05746899467327581 0.24163809826312577 0.5810782266596907 0.009385365778076337 0.01733991779435336 2.689421050408896e-08 7.570341200173742 -0.15358286245464137 QPPVYCT(ph)SPDFK ddPTM_A549_PD325901_60min_R1 1 QPPVYCTSPDFK 12 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QPPVY(0.005)CT(0.498)S(0.498)PDFK 63.727 0.007264499999999999 5478900.0 1759.9 1758.5 2292.9 1964.9 2046.4 1609.6 1557.3 2473.2 1904.3 2417.4 1994.8 True False 1938.5637524300944 1906.6949664562858 2448.509982327792 2086.2674103883237 1902.6679236967454 1596.491951261179 1616.5639036872576 2423.8700858121338 1824.2688933816344 2264.764951443934 1749.4522460790631 1.1080975526910637 1.0898811160634083 1.399586635082771 1.1925260692677626 1.0875792282762076 0.9125667504439151 0.9240400287063338 1.3855022857837935 1.0427657556645247 1.2945565999413866 1.0 10.772687569254026 -7.449669658050266 0.2300991607111375 0.9822273689065256 1.2398270362859114 0.0 0.17132119226649345 5.585001881196262 0.6580221651292404 0.1773635703287666 0.45615693029481574 3.55083377318202e-08 7.449669658050266 0.2575996673793858 QPPVYCTS(ph)PDFK ddPTM_A549_MK2206_60min_R1 1 QPPVYCTSPDFK 12 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 QPPVY(0.001)CT(0.142)S(0.858)PDFK 66.498 0.0052887 3007200.0 1646.6 1837.0 1569.5 1851.4 2119.9 1683.6 1643.3 1869.2 2551.2 2504.9 2624.5 True False 1924.5058244950903 1930.495453538604 1792.0787003946273 2304.9930831125034 1808.0655182145504 1861.7574345167684 1941.8663387802624 2134.1648241849207 1973.3572734292472 1939.0413502713952 1972.7642174848907 0.975537678267844 0.9785738388948599 0.9084099785018291 1.1684077918095943 0.9165137436037251 0.9437303343277147 0.9843377741593364 1.0818144435455153 1.0003006218072592 0.98290577915262 1.0 10.946002821771522 -8.041730434081948 24.952706859751526 1.0075477741835552 0.982228814598287 0.04832023078255743 0.06888912173114733 1607.9457688164102 961467.1392887207 0.010456479715390713 0.013500123312394403 9.083841878999398e-09 8.041730434081948 -0.025318959585268197 QPPYQLRPSLFVLS(ph)PIKEPAK ddPTM_A549_MK2206_60min_R1 2 QPPYQLRPSLFVLSPIKEPAK 21 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 QPPYQLRPS(0.185)LFVLS(0.815)PIKEPAK;QPPYQLRPS(0.006)LFVLS(0.994)PIKEPAK 77.693 4.4853e-05 22504000.0 3597.6 3682.6 3938.5 3542.6 5610.7 4587.3 3962.1 3793.3999999999996 5733.3 5561.6 5639.1 True False 4204.786927124705 3870.028610343639 4497.038522780655 4410.537159033354 4785.3734624493445 5072.7250411967025 4681.962283746894 4331.126066800275 4434.716704198774 4305.23069730105 4238.755838757497 0.9919861126884936 0.9130105053368813 1.0609336073716544 1.0405263541497618 1.1289570912987705 1.196748582405649 1.1045605035649597 1.0217918256102843 1.046230750931556 1.0156826344975411 1.0 12.049425151182787 -5.771860581091891 24.98284067240059 1.0497548677578925 0.9524983067038049 0.3278875527901596 0.0592708184182495 196.161195088417 470263.2905364534 0.009432866732071048 0.02979038696308065 1.6909836906976552e-06 5.771860581091891 -0.09725656105408764 QPPYQLRPSLFVLS(ph)PIKEPAK ddPTM_A549_PD325901_60min_R1 2 QPPYQLRPSLFVLSPIKEPAK 21 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 QPPYQLRPS(0.001)LFVLS(0.999)PIKEPAK;QPPYQLRPS(0.004)LFVLS(0.996)PIKEPAK 100.27 2.7955000000000003e-10 17924700.0 5548.6 5768.8 6558.6 6186.9 6983.1 6591.1 7099.700000000001 7406.3 7141.9 6945.4 6876.4 True False 6111.889787336573 6254.957021605363 7003.7060360657015 6569.050761530625 6492.6311463871825 6537.42426687224 7369.882968604908 7258.57553637005 6841.750779626258 6506.866258690623 6030.646393091075 1.0134717555880202 1.037195122030578 1.161352461999662 1.0892780530220385 1.0766061750570177 1.0840337570383414 1.2220718125752008 1.203614847105898 1.1344970893110917 1.0789666371659798 1.0 12.558096929926373 -2.004411233296721 24.56490506146549 1.0876172580340957 7.927853445410804e-05 0.0 0.07077266738610263 0.0 0.0 0.010883252276096558 0.0 0.00989894170521432 2.004411233296721 -1.0875379794996416 QPPYQLRPSLFVLSPIKEPAKVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QPPYQLRPSLFVLSPIKEPAKVSPR 25 3 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 QPPYQLRPSLFVLS(0.003)PIKEPAKVS(0.997)PR;QPPYQLRPSLFVLS(0.001)PIKEPAKVS(0.999)PR 65.301 4.3158e-05 11661200.0 2122.54 2590.6000000000004 2382.7 2234.9 3173.8 3363.7 2738.0 2742.8 2659.6000000000004 3527.3 2822.8999999999996 True False 2338.0186982686378 2808.9189537114903 2544.404350339059 2372.944697173833 2950.883237015603 3336.307142431181 2842.1960882910903 2688.0927023150266 2547.8262610081356 3304.5856760272177 2475.7011958374706 0.9443864640044907 1.1345953051338653 1.027750988131 0.958493981892319 1.1919383655737943 1.3476210893466036 1.148036803904214 1.0857904446767086 1.0291331867076419 1.3348079653487244 1.0 11.273621483989233 -8.745354020463587 2.8516193178718234 1.0123163378072808 1.1124225054362877 0.0 0.14358514186309607 0.3922234688085025 6.350367037727319 0.019975224212520744 0.021817089945607222 1.7974051409834513e-09 8.745354020463587 0.10010616762900693 QPQIKQEPES(ph)EEEEEEKQEK ddPTM_A549_MK2206_60min_R1 1 QPQIKQEPESEEEEEEKQEK 20 2 P49756 P49756 RBM25 RNA-binding protein 25 1 QPQIKQEPES(1)EEEEEEKQEK 66.85300000000001 0.0002972 9082600.0 5060.8 7094.2 6623.4 5636.2 8916.7 5633.8 5773.9 5577.8 9662.6 9240.4 9545.7 True False 5914.939315319293 7455.264478221857 7562.697715319386 7017.069253018632 7605.065241881067 6229.964976586227 6822.942891427832 6368.470231296088 7474.036528001507 7152.987222263481 7175.239242082507 0.8243542989658655 1.0390266061787894 1.0539993803920082 0.977956137248189 1.0599040652578726 0.8682588505269229 0.9509011004694492 0.8875620751354534 1.0416428325018858 0.9968987766026646 1.0 12.808811220647174 QPQIKQEPES(ph)EEEEEEKQEK ddPTM_A549_PD325901_60min_R1 1 QPQIKQEPESEEEEEEKQEK 20 2 P49756 P49756 RBM25 RNA-binding protein 25 1 QPQIKQEPES(1)EEEEEEKQEK 89.829 8.4804e-07 10153000.0 3949.4 3865.5 3151.7 3298.0 4147.2 3579.7 4240.1 4269.2 4416.0 4259.1 4341.6 True False 4350.340180605386 4191.259250973432 3365.593314711719 3501.709969698559 3855.914979063301 3550.548110045752 4401.459325771749 4184.047456877389 4230.410877053663 3990.1796991374476 3807.6107236699722 1.1425380629278992 1.1007583377466905 0.8839121325584949 0.9196607068916514 1.0126862378795831 0.9324871599856064 1.1559635806281674 1.0988642906343606 1.1110408032930883 1.0479484350468227 1.0 11.89467027493131 -7.746543873617752 24.999971128227283 1.0650473367981699 0.9951429870079022 0.1984940661228899 0.08047111966226654 398.04820891993387 668065.4076969497 0.013583150784597313 0.020099721317825774 1.7924874612269765e-08 7.746543873617752 -0.06990434979026772 QPQIKQEPES(ph)EEEEEEKQEKEEK ddPTM_A549_PD325901_60min_R1 1 QPQIKQEPESEEEEEEKQEKEEK 23 3 P49756 P49756 RBM25 RNA-binding protein 25 1 QPQIKQEPES(1)EEEEEEKQEKEEK 96.44 6.8407e-08 30234000.0 2441.5 2349.5 2532.1 2358.9 3156.8 3191.8 3556.3 3718.8 3280.3 2768.4 2576.6 True False 2689.3592826626964 2547.5006105709685 2703.943532754241 2504.6038955494014 2935.0772583687863 3165.8070390379157 3691.6369425820303 3644.6256166578387 3142.44039855053 2593.6027515419014 2259.6945344131323 1.1901428452855698 1.1273650361917535 1.196596925635564 1.1083816230054628 1.2988823107150889 1.400988934931469 1.6336884859266119 1.6128842023350685 1.3906483158205525 1.1477669711740435 1.0 11.141912046916493 -4.253454307553705 16.60244418952057 1.2517240467361566 1.1831788529399778 0.0 0.19935187691173997 0.0 0.0 0.03152919440355472 0.0 5.5788629468668414e-05 4.253454307553705 -0.06854519379617874 QPQPS(ph)PAEGR ddPTM_A549_PD325901_60min_R1 1 QPQPSPAEGR 10 0 P56192;H0YHV5;P56192-2 P56192 MARS Methionine--tRNA ligase, cytoplasmic 1 QPQPS(1)PAEGR 70.977 0.0028511 2450400.0 526.06 514.31 559.27 397.63 496.37 564.27 390.1 616.33 521.62 501.9 563.06 True False 579.4652239350964 557.652708671102 597.2254253637158 422.1907020167486 461.50668358353823 559.6747722031224 404.9454689709108 604.0368146484684 499.6981253824121 470.20994834520997 493.80718953142025 1.173464534781193 1.1292924049977189 1.2094303971767408 0.8549707476259522 0.9345888301494104 1.133387249250471 0.8200477383797683 1.2232240183089405 1.0119296275466987 0.9522136540608046 1.0 8.947804031167973 -6.2342649131812475 24.959097766550347 1.0040113639609494 1.1665854596857532 0.3434701950857869 0.10942125204169328 630.2400342404326 578859.8093594965 0.01364008100667719 0.03607893237205261 5.830893199515264e-07 6.2342649131812475 0.16257409572480386 QPQS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 QPQSPPR 7 0 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 QPQS(1)PPR 52.255 0.047771 6005000.0 1222.8 1274.3 1005.6 817.03 1468.3 1276.6 1012.9 1180.1 1615.7 1972.1 1908.4 True False 1429.1787454102982 1339.1564270246283 1148.2092010938757 1017.2023866778709 1252.3150150452486 1411.6889646615032 1196.9308188100333 1347.3827889046788 1249.7465297427232 1526.6012403170669 1434.4916108394616 0.9962963426282749 0.933540786788538 0.8004293593755811 0.7091030571329769 0.8730026760577543 0.9841040226337647 0.8343937390540693 0.9392754748256723 0.8712121564875336 1.0642106435350311 1.0 10.486323815657688 -11.139221600481987 0.4515607892384198 1.0519032337048715 0.8729233383281582 0.32341014954140646 0.08119529107463684 3.0098538260969736 0.6237866655720123 0.25784338808249035 0.021224815229015998 7.257355534984054e-12 11.139221600481987 -0.17897989537671333 QPS(ph)ATR ddPTM_A549_MK2206_60min_R1 1 QPSATR 6 0 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67;Q6P582 H7BZ50;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A 1 QPS(0.611)AT(0.389)R 64.42 0.058642999999999994 193290000.0 4800.9 4204.5 3128.4 2410.0 3980.2 4065.1 2867.1 4726.2 4166.3 6533.5 5473.9 True False 5611.174549264226 4418.491091128503 3572.05416139825 3000.4501081890126 3394.7178525390573 4495.26618380501 3388.0149576564754 5396.153323380469 3222.639702213969 5057.577812287183 4114.5795580455515 1.3637297493232978 1.0738621112547673 0.8681456054029967 0.7292239865242133 0.8250461085145641 1.0925213914056109 0.8234170490230602 1.31147137812148 0.783224544999378 1.229184596126648 1.0 12.006529303276839 -5.376187008933203 2.6925053979379214 0.9142578969833245 1.3979352331330452 0.25673613196459344 0.18278072833008374 0.26492877223271766 2.896781517091194 0.021657450741453383 0.24974941135636522 4.2054550082291445e-06 5.376187008933203 0.48367733614972075 QPS(ph)ATR ddPTM_A549_PD325901_60min_R1 1 QPSATR 6 0 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67;Q6P582 H7BZ50;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A 1 QPS(0.99)AT(0.01)R 71.501 0.049423 184390000.0 4946.9 5347.9 4631.1 3284.4 4925.4 2767.8 2758.5 3310.6 3716.2 5018.5 5310.1 True False 5449.1056462847 5798.586301456679 4945.394295066611 3487.269928586396 4579.456895707559 2745.259954461165 2863.476227009119 3244.5674858845437 3560.02103743361 4701.6310535374305 4656.991363497313 1.170091421898735 1.2451357215105614 1.061929024354624 0.7488246501637319 0.9833509530643564 0.5894921721305333 0.6148768600804754 0.6967089334363581 0.7644465620739528 1.0095855213282152 1.0 12.185182491310096 -6.056940942675454 3.698869150570231 0.8314505074001981 1.2028055848028627 0.5615901241840464 0.14221894138175764 0.14973405854228497 4.082262153390453 0.02245139639021112 0.06816571253135666 8.771200877840922e-07 6.056940942675454 0.3713550774026646 QPS(ph)ATRLPK ddPTM_A549_MK2206_60min_R1 1 QPSATRLPK 9 1 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67;Q6P582 H7BZ50;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A 1 QPS(0.91)AT(0.09)RLPK 59.57 0.0025158000000000003 24204000.0 1823.5 2882.6 2309.4 1939.5 3416.6 1730.6 2149.7 1291.6 3752.7 3354.1 3984.6 True False 2131.2622197053315 3029.312027419912 2636.907646187544 2414.6775870674646 2914.0226659426526 1913.7309433206938 2540.272663832489 1474.6882553591072 2902.7194418304875 2596.4064804763816 2995.113850634523 0.7115797014707197 1.0114179889282486 0.8804031424811808 0.8062056093647021 0.9729255084327794 0.6389509844226005 0.8481389324463661 0.49236467423323177 0.9691516204686305 0.8668807297346396 1.0 11.548395128619056 -8.960681997377392 24.99998903599082 0.9863908952297302 0.8032974206416758 0.1622111521074775 0.14353375325815432 145.59460093726545 92575.43861470128 0.02315154260250151 0.02460764525613827 1.0947576852001611e-09 8.960681997377392 -0.18309347458805447 QPS(ph)ATRLPK ddPTM_A549_PD325901_60min_R1 2 QPSATRLPK 9 1 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67;Q6P582 H7BZ50;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A 1 QPS(0.798)AT(0.202)RLPK;QPS(0.98)AT(0.02)RLPK 73.848 0.00061338 81287000.0 6122.5 6514.8 8416.9 7178.2 7538.4 11281.4 9775.8 12249.5 9514.5 8421.6 9558.7 True False 6744.051692853719 7063.825059692588 8988.12144893139 7621.581111124978 7008.928790068183 11189.528018736244 10147.823418523014 12005.174112953157 9114.638652565009 7889.8587387607495 8383.040497591714 0.8044875477806835 0.8426328206003406 1.072179175504819 0.9091666816251825 0.8360843290786575 1.3347815773943572 1.2105182387509983 1.4320787447468508 1.0872712180244708 0.9411691069639178 1.0 13.03325788362438 -7.224286626255333 24.978906481033487 1.1072003604528675 0.900979446149809 0.4197785313166774 0.15188873429339425 603.2006442468007 405550.0798651419 0.024184659073751214 0.04188823493329985 5.966413844320371e-08 7.224286626255333 -0.20622091430305856 QPS(ph)DASETTGLVQR ddPTM_A549_MK2206_60min_R1 1 QPSDASETTGLVQR 14 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 QPS(0.996)DAS(0.003)ET(0.001)TGLVQR 55.213 0.016433 1099700.0 625.68 883.28 685.22 707.42 867.15 736.26 651.79 813.32 776.01 1158.3 923.92 True False 731.2794875926683 928.2351792060847 782.3944995759196 880.7379317572907 739.5933837066593 814.1705445101659 770.2118060935842 928.610600688038 600.2449740333293 896.6392255257125 694.4851651052167 1.0529807177117703 1.3365802839941934 1.1265820191528273 1.2681882580225543 1.064952026145308 1.172336840898274 1.1090399691646324 1.3371208592300896 0.8643020818772857 1.2910847784486064 1.0 9.43980006690764 -8.77356633214639 24.999996212200564 0.9359204171327286 1.182700751561761 0.0 0.14446909008269238 111.30818637012696 229463.71245191342 0.016447998957629557 0.017573712175763593 1.684355146450301e-09 8.77356633214639 0.24678033442903236 QPS(ph)EEEIIK ddPTM_A549_MK2206_60min_R1 2 QPSEEEIIK 9 0 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 QPS(1)EEEIIK;QPS(1)EEEIIK 130.1 4.9797e-05 169418000.0 7116.3 9240.1 7326.4 6172.799999999999 9546.5 7985.5 6012.5 7683.4 10113.3 10882.3 9702.0 True False 8317.357463169206 9710.381622341882 8365.393686251158 7685.136277107524 8142.222496172081 8830.520309654108 7104.893422939406 8772.545479425647 7822.653697621512 8423.980871914413 7292.7256384219545 1.1405005310153102 1.3315161030030296 1.1470873992815276 1.0538085015317376 1.1164855089672545 1.2108669306205946 0.9742438938751585 1.2029172512958963 1.0726652949080677 1.1551210465854365 1.0 12.832242403755563 -2.0000000004065277 0.08316757756656389 0.8899403185262635 1.7824494749363857 0.06685346138686643 0.09387274686952451 107.18758064537323 0.6283649924088737 0.9541856806136378 10.976227640732747 0.009999999990639354 2.0000000004065277 0.8925091564101222 QPS(ph)EEEIIK ddPTM_A549_PD325901_60min_R1 2 QPSEEEIIK 9 0 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 QPS(1)EEEIIK;QPS(1)EEEIIK 130.56 4.941e-05 241320000.0 18040.4 18527.4 16318.6 13721.8 21593.0 14950.7 18922.4 18673.699999999997 18169.3 19636.2 18022.9 True False 19871.848127359455 20088.769019915966 17426.078327713498 14569.364421531132 20076.38217180599 14828.94645608878 19642.502286734594 18301.23840426574 17405.70750644275 18396.366980865147 15806.197556576268 1.2572187622121456 1.2709425494658522 1.1024839000866005 0.9217501153823967 1.2701588791323872 0.9381729162254526 1.2427088941807012 1.1578520601655642 1.101195113128331 1.1638704954191352 1.0 13.948202724724299 -2.000000243045401 0.01763113240212476 6.777702180231975e-11 2.531417502223884 0.020221234490315654 0.12268016479005378 3547.071716405135 4.692396943820634 257.1680169834102 439.5667047809266 0.00999999440367439 2.000000243045401 2.531417502156107 QPS(ph)ESGR ddPTM_A549_MK2206_60min_R1 2 QPSESGR 7 0 Q9H7M9 Q9H7M9 C10orf54 Platelet receptor Gi24 1 QPS(0.903)ES(0.097)GR;QPS(0.999)ES(0.001)GR 95.60799999999999 0.011874 15375500.0 6744.8 5191.200000000001 3896.9 2027.4 1211.77 643.3 914.2 729.4 1010.89 5839.9 5014.4 True False 7883.157345472173 5455.409906592051 4449.539017246145 2524.1130910134457 1033.5202382220125 711.3735790120196 1080.2983064035259 832.7946836938157 781.9250290596159 4520.662534013304 3769.186089600398 2.091474699862306 1.4473708055020502 1.1805039367843673 0.6696705949270463 0.2742024972111643 0.1887340030715857 0.28661315220922323 0.22094814739754784 0.20745195659535984 1.1993736649103934 1.0 11.880037309145964 -5.75892486048015 1.3018106730294015 0.506294072255491 2.132478833725894 0.7089267216890929 0.3272943602869744 0.29967820408106327 0.7474047238848984 0.05324032874904942 0.5076551130630496 1.7421082584200438e-06 5.75892486048015 1.626184761470403 QPS(ph)ESGR ddPTM_A549_PD325901_60min_R1 2 QPSESGR 7 0 Q9H7M9 Q9H7M9 C10orf54 Platelet receptor Gi24 1 QPS(0.999)ES(0.001)GR;QPS(0.988)ES(0.012)GR 80.78699999999999 0.01571 15794400.0 3306.7 5052.1 3567.8 2801.0 3838.8 2032.4 2675.1 2490.5 3075.3 5503.799999999999 5623.1 True False 3642.393749736117 5477.858197346494 3809.932362924284 2974.0114084674506 3569.17593114106 2015.8488082400713 2776.902394370887 2440.8250237405464 2946.0558356438255 5156.289128715614 4931.494347767785 0.7385983827366298 1.1107907281341645 0.7725715765341655 0.6030649532861415 0.7237513985505486 0.40877037791851767 0.5630955241037308 0.49494632896525026 0.5973961699818924 1.04558350169246 1.0 12.267809164823277 -2.0239833909511242 22.092511516315923 0.7452483787919758 0.03372391402631969 0.0 0.2217898901887258 0.0 0.0 0.031348518024281215 0.0 0.009462733497136566 2.0239833909511242 -0.7115244647656561 QPS(ph)KEEEEEEEEEQLNQTLAEMK ddPTM_A549_MK2206_60min_R1 2 QPSKEEEEEEEEEQLNQTLAEMK 23 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 QPS(0.998)KEEEEEEEEEQLNQT(0.002)LAEMK;QPS(1)KEEEEEEEEEQLNQTLAEMK 54.744 0.0015914999999999998 4205600.0 1143.04 1113.1399999999999 1114.9499999999998 1213.6 1678.4899999999998 1461.62 1269.0300000000002 1346.1100000000001 1954.47 1645.55 1967.93 True False 1335.9572073550753 1169.7940713946432 1273.0666753775013 1510.9320544805744 1431.5863444822573 1616.287658255167 1499.5963244096124 1536.9252147889813 1511.785665647249 1273.8191121158911 1479.238668895045 0.9031383747918127 0.7908082015381944 0.8606229015960289 1.021425471258944 0.9677859121622457 1.0926483279824575 1.0137622521251246 1.0389974566694005 1.0220025324084556 0.8611315664614168 1.0 10.530639128614954 -6.234036153846204 5.086545995825807 1.0164723208993498 0.8429834175574381 0.5471137799011393 0.060021089082679786 0.0558995894931459 4.0889129858805155 0.004856399814102898 0.01282638940700233 5.833965360614574e-07 6.234036153846204 -0.1734889033419117 QPS(ph)KEEEEEEEEEQLNQTLAEMK ddPTM_A549_PD325901_60min_R1 2 QPSKEEEEEEEEEQLNQTLAEMK 23 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 QPS(1)KEEEEEEEEEQLNQTLAEMK;QPS(1)KEEEEEEEEEQLNQTLAEMK 101.32 1.3228e-10 9472000.0 1564.94 1405.3600000000001 1690.94 1204.22 1671.27 1050.75 1581.81 1440.17 1050.4099999999999 1404.75 1501.24 True False 1723.8115567520615 1523.7946193113496 1805.6973568482501 1278.6019344179495 1553.8857607684995 1042.1930403750516 1642.0066451496455 1411.4446795584915 1006.2649205991715 1316.053845263866 1316.5969971444424 1.3092932465217708 1.1573736098565444 1.37148828439121 0.9711414633263632 1.1802288506951717 0.7915809033709301 1.2471596462022787 1.0720400263860266 0.7642922798560624 0.999587457755293 1.0 10.362598097078624 -6.684466043756478 0.538611978660299 0.9032936346179352 1.3272164046441581 0.3248890677036804 0.15453909027860596 0.9683870828725282 0.42196774212230637 0.03424070964495021 0.1971932936953185 2.0679210604325334e-07 6.684466043756478 0.4239227700262229 QPS(ph)PEEIR ddPTM_A549_PD325901_60min_R1 1 QPSPEEIR 8 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;A0A0A0MS30 E7EPN9 PRRC2C Protein PRRC2C 1 QPS(1)PEEIR 54.608000000000004 0.022598 1608400.0 558.74 498.48 646.57 666.5 461.96 617.89 495.03 513.79 528.67 528.72 799.59 True False 615.4628734773521 540.4886590157123 690.4501283412619 707.6681912686743 429.5135232754827 612.8581087007767 513.8686375408099 503.54205538954216 506.4518383994477 495.3365289680806 701.2454990186274 0.8776710500654542 0.7707552629886544 0.9846054332006791 1.0091589782166663 0.6125009342328391 0.8739565666495597 0.7327942043976812 0.718068146026227 0.7222175958465505 0.7063667854714071 1.0 9.45377579551135 -4.436624834470983 16.693798118048225 0.8447101176727095 0.8353015944107383 0.0 0.13306455505643375 0.0 0.0 0.018675183287155433 0.0 3.659107473262002e-05 4.436624834470983 -0.00940852326197128 QPS(ph)PGPTPPPFPGNR ddPTM_A549_MK2206_60min_R1 2 QPSPGPTPPPFPGNR 15 0 O43516-2;O43516;O43516-3;E9PB87 O43516-2 WIPF1 WAS/WASL-interacting protein family member 1 1 QPS(0.994)PGPT(0.006)PPPFPGNR;QPS(0.995)PGPT(0.005)PPPFPGNR 82.55 0.00027674 7546400.0 5987.3 5866.0 5612.1 5043.8 7663.200000000001 5902.7 4667.4 4962.4 9151.8 8481.6 9703.9 True False 6997.8098645690825 6164.554344288212 6407.980168515248 6279.531226424788 6535.953431379658 6527.319796104848 5515.406164195819 5665.8353967126295 7078.931912421526 6565.600669272972 7294.153815984619 0.9593724016669186 0.8451363242133761 0.878509053986854 0.8608992056986298 0.8960536885110074 0.8948700508345041 0.7561406440469076 0.7767639043059874 0.9704939175958356 0.9001182090354231 1.0 12.832524907590628 -8.888503454009939 7.473289782720836 0.9870388226605842 0.8579737019959278 0.3265750419800707 0.05909559058481695 0.12695090560811095 7.931669183505762 0.009482322612876331 0.010066869604727562 1.292696419755027e-09 8.888503454009939 -0.12906512066465636 QPS(ph)PIVPALQNK ddPTM_A549_MK2206_60min_R1 2 QPSPIVPALQNK 12 0 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 QPS(1)PIVPALQNK;QPS(1)PIVPALQNK 102.73 0.00020614 12800800.0 6044.3 6756.6 6994.2 6684.9 9683.6 6969.4 7505.2 6533.299999999999 11308.099999999999 10619.8 11259.400000000001 True False 7064.430071052884 7100.482080228052 7986.082730997201 8322.700800096562 8259.155267787355 7706.897282086696 8868.797691117637 7459.415282392109 8746.833405325053 8220.779804228574 8463.3802363686 0.8347055046275498 0.8389652694222645 0.943604388312796 0.9833778664856017 0.9758695742271326 0.9106169245437931 1.0479025452509965 0.8813754166848983 1.033491720924744 0.9713352791243467 1.0 13.04701826907825 -3.1320239787651336 0.3416847171988535 1.0112402127984585 1.4744494418757718e-20 0.46910124889499716 0.05064401124707346 11.889131439540334 0.3004618287283682 0.013076473353279001 6.800022279796508 0.0007378634892389906 3.1320239787651336 -1.0112402127984585 QPS(ph)PIVPALQNK ddPTM_A549_PD325901_60min_R1 1 QPSPIVPALQNK 12 0 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 QPS(1)PIVPALQNK 73.877 0.0013732000000000002 3689100.0 3612.9 3526.0 3897.2 4125.3 5580.5 4329.6 4014.9 5187.9 5152.4 3901.4 4626.3 True False 3979.678948323592 3823.1483944980764 4161.687427767396 4380.110411763936 5188.544931679869 4294.341173074305 4167.689216537582 5084.423264671184 4935.862545953648 3655.0649381829094 4057.2944285319677 0.9808701385675728 0.9422901053501775 1.025729707585752 1.0795643473546905 1.2788189329304396 1.058424831798097 1.0272089664554016 1.25315610050781 1.2165403898823208 0.9008626321224129 1.0 11.986302284068556 -6.142881132891347 2.6917947025501143 1.1183946418393258 0.9644709627358617 0.19673568583572332 0.10822669571026715 0.29256696612566 4.071444156381509 0.014821813174696039 0.04699441938870985 7.196459193137803e-07 6.142881132891347 -0.15392367910346405 QPS(ph)PS(ph)HDGS(ph)LSPLQDR ddPTM_A549_MK2206_60min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 3 QPS(0.922)PS(0.99)HDGS(0.945)LS(0.143)PLQDR 76.34100000000001 0.00016975 5350300.0 938.0 1191.2 899.04 1136.6 1775.2 1050.4 1246.8 1126.1 1299.2 1988.3 1516.7 True False 1096.3114681017817 1251.8269919734257 1026.537390763164 1415.0670510239129 1514.0704315932207 1161.5526308009107 1473.3274211593932 1285.7281235366145 1004.9332743960804 1539.141649065678 1140.061531209501 0.9616248229502976 1.0980345864712686 0.9004227953153561 1.2412198923356847 1.3280602758229465 1.0188508242784138 1.2923227219116213 1.1277708161703996 0.881472838865055 1.35005138488691 1.0 10.154895976047897 -8.74913433708414 24.556818121972487 0.9440288432403957 1.1261277444803703 0.0 0.17680196012141677 168.79641609860036 336861.6980975694 0.022038100651344483 0.024897311307249672 1.7818275227323152e-09 8.74913433708414 0.18209890123997463 QPS(ph)PS(ph)HDGSLS(ph)PLQDR ddPTM_A549_MK2206_60min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 3 QPS(0.959)PS(0.927)HDGS(0.358)LS(0.757)PLQDR 56.247 0.0038214 10143000.0 1245.7 947.97 904.73 1099.9 1139.8 1089.1 1255.5 922.76 1738.2 1545.2 1606.1 True False 1455.9437055590518 996.2176238927537 1033.034318323052 1369.3755493763877 972.13692988393 1204.3478391139304 1483.608098544768 1053.5640558339805 1344.5004753350267 1196.138246811993 1207.261043895022 1.2059891379098073 0.8251882465109843 0.8556842975651254 1.134282892917948 0.8052416954890682 0.9975869305186119 1.2289041430162935 0.8726895157942276 1.1136783400193424 0.9907867506043736 1.0 10.23752194585309 -7.5274772094598115 24.996155896449107 1.0532645977346564 0.9548571341825001 0.05695634551958839 0.1408228954581659 225.55012391651368 1226033.2860317864 0.019839409004214447 0.029488264571454263 2.9684025127040044e-08 7.5274772094598115 -0.09840746355215635 QPS(ph)PS(ph)HDGSLS(ph)PLQDR ddPTM_A549_PD325901_60min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 3 QPS(0.596)PS(0.85)HDGS(0.559)LS(0.995)PLQDR 88.565 4.4917000000000005e-06 14039000.0 2213.0 2555.5 2770.4 2391.1 2883.5 2473.6 2467.8 2463.3 2897.2 2414.5 3021.5 True False 2437.662130875504 2770.860953528031 2958.4160037685515 2538.792816417896 2680.972907534969 2453.4558217194653 2561.7134794319772 2414.1675490785346 2775.4407592843936 2262.048057938851 2649.8746548665977 0.9199160142909563 1.0456573666377909 1.116436205137215 0.9580803423117786 1.011735744787497 0.9258761795444167 0.966730058241544 0.9110497149911685 1.0473856769742633 0.8536434181082913 1.0 11.371708403175946 QPS(ph)PSHDGS(ph)LS(ph)PLQDR ddPTM_A549_PD325901_60min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 3 QPS(0.629)PS(0.482)HDGS(0.89)LS(0.999)PLQDR 77.969 0.00014408 13534000.0 2188.0 2816.8 1975.2 1965.2 2512.3 1842.9 2001.2 2570.5 2254.3 2373.0 1994.9 True False 2410.1241492795334 3054.181621560459 2109.248949842494 2086.5859407069747 2335.8447149644903 1827.8920334115467 2077.356761098658 2519.229360981761 2159.5596105394193 2223.168375021286 1749.539946713016 1.3775759472126392 1.7457055652250555 1.2056020520167536 1.192648355716136 1.3351193948746392 1.044784394232173 1.1873731520114956 1.439938176727439 1.2343585607157677 1.2707159840494693 1.0 10.772759890232606 -2.000000000000003 0.06032018907379858 0.6210522503245267 2.6886090255846518 0.18284355083118597 0.1750456916810357 203.74895379413127 0.8925357066395547 6.082225778692188 36.8187579451295 0.009999999999999929 2.000000000000003 2.067556775260125 QPS(ph)PSHDGS(ph)LSPLQDR ddPTM_A549_MK2206_60min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(0.635)PS(0.366)HDGS(0.84)LS(0.159)PLQDR 103.04 1.2505e-06 31216000.0 1163.3 1623.4 1351.1 1147.9 1705.6 1511.3 1148.1 1570.3 1920.2 1966.3 2067.7 True False 1359.6366000456314 1706.024125897968 1542.706296338439 1429.1355515311898 1454.708499394657 1671.224762880251 1356.6949087528858 1792.8948338420619 1485.2777659293047 1522.1114643453404 1554.233024383125 0.8747958502459894 1.0976630268006877 0.9925836551766355 0.9195117650382018 0.9359655061840105 1.0752729717241467 0.8729031538184938 1.1535560020375077 0.9556338995684456 0.9793328545116112 1.0 10.601987106244843 QPS(ph)PSHDGS(ph)LSPLQDR ddPTM_A549_PD325901_60min_R1 2 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(0.983)PS(0.017)HDGS(0.867)LS(0.133)PLQDR;QPS(0.721)PS(0.281)HDGS(0.711)LS(0.287)PLQDR 139.46 5.7431999999999994e-11 62173000.0 5364.7 5727.799999999999 5792.6 4954.5 5862.5 5496.6 5287.2 6091.8 5592.6 6104.200000000001 6292.3 True False 5909.320394716594 6210.501807715844 6185.720669733511 5260.5282125141 5450.738224527053 5451.837511991921 5488.407289266855 5970.294270075347 5357.562470790383 5718.779770250709 5518.386990176103 1.0708419698068359 1.1254197682713902 1.1209291194592557 0.9532727990767872 0.9877412066661002 0.987940411155895 0.9945673072652175 1.0818911904336783 0.9708566072528038 1.0363136511504807 1.0 12.430030917364709 -6.253708558385496 24.990872735286622 0.9918535317832852 1.107699242368066 0.6211910805000238 0.035632323835871234 239.41121796340974 773925.7229468474 0.004611539494816708 0.011949257270332431 5.575597845683359e-07 6.253708558385496 0.11584571058478088 QPS(ph)PSHDGSLS(ph)PLQDR ddPTM_A549_MK2206_60min_R1 2 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(0.98)PS(0.02)HDGS(0.001)LS(0.999)PLQDR;QPS(0.974)PS(0.026)HDGS(0.005)LS(0.995)PLQDR 182.17 1.965e-34 365810000.0 3101.4 3459.7 3358.6000000000004 3327.3 4887.4 4016.2 2739.4 3884.2 5448.1 5508.799999999999 6552.9 True False 3624.840498049966 3635.7839524265155 3834.899982889707 4142.488649368171 4168.46993429963 4441.191618262203 3237.1135206320487 4434.797244863615 4214.114048827959 4264.358253972238 4925.634079160506 0.7359134762742588 0.7381352114256476 0.7785596577534041 0.8410061695192328 0.8462808782194551 0.901648710985679 0.6571973209150286 0.9003505281942205 0.8555475256794117 0.8657480814529017 1.0 12.266093739987985 -14.999999990401957 0.10645990622906733 1.6625189664224878 0.6817537984894664 0.2963298368933569 0.07633473643164986 48.2323766509329 0.36570333392094934 6.940369960030014 0.35867525065487416 1.0000000221003115e-15 14.999999990401957 -0.9807651679330214 QPS(ph)PSHDGSLS(ph)PLQDR ddPTM_A549_PD325901_60min_R1 3 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(0.985)PS(0.015)HDGS(0.001)LS(0.999)PLQDR;QPS(0.791)PS(0.209)HDGS(0.047)LS(0.953)PLQDR;QPS(0.993)PS(0.007)HDGS(0.003)LS(0.997)PLQDR 189.78 7.3513e-35 523578000.0 5972.8 5961.900000000001 5946.2 5369.2 7952.4 5221.7 6759.9 7804.800000000001 7132.0 6471.3 6178.9 True False 6579.1542590570325 6464.330236289868 6349.744889405342 5700.843289662065 7393.850858290647 5179.17620644912 7017.151693659216 7649.127141252845 6832.266842198081 6062.701013601035 5418.934471274273 1.2141047827636733 1.1929153730419197 1.1717700081197304 1.0520229244110975 1.3644473646037591 0.9557554596579624 1.2949320075481774 1.4115555708969734 1.2608137039515555 1.118799469847691 1.0 12.40379348603234 -10.769440243860918 1.0942336321241362 1.0036194373362424 1.2132580962355954 0.1598840298507509 0.12703170248043766 0.4956745133424165 1.0816635586550591 0.07610651811393387 0.020698684982971803 1.700433906361136e-11 10.769440243860918 0.20963865889935307 QPS(ph)PSHDGSLSPLQDR ddPTM_A549_MK2206_60min_R1 2 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPS(0.713)PS(0.287)HDGSLSPLQDR;QPS(0.673)PS(0.327)HDGSLSPLQDR 157.88 8.4731e-21 205655000.0 3396.3999999999996 3981.7999999999997 4124.3 3321.0 4927.0 4633.1 3283.1 4230.1 6761.299999999999 6221.4 7021.3 True False 3969.629285992422 4184.456612357109 4709.187756634319 4134.645149085354 4202.244826757432 5123.371566797124 3879.5967728652563 4829.729629137937 5229.876345577442 4815.981419050047 5277.717431978154 0.7521488857929545 0.7928534762022534 0.8922773561352368 0.7834154068259084 0.7962239132575876 0.9707551858980105 0.7350898987805672 0.9151171299687589 0.9909352694574289 0.9125121761672181 1.0 12.365698395766465 -8.547090948530084 3.7788110146021485 0.9953173359428829 0.8228115691937457 0.4849713507932665 0.06736453409702982 0.10272767255781885 3.2054324567150747 0.010001642074243575 0.01160233800461748 2.8373247829443954e-09 8.547090948530084 -0.1725057667491372 QPS(ph)PSHDGSLSPLQDR ddPTM_A549_PD325901_60min_R1 3 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPS(0.962)PS(0.038)HDGSLSPLQDR;QPS(0.943)PS(0.057)HDGSLSPLQDR;QPS(0.773)PS(0.227)HDGSLSPLQDR 175.65 8.952399999999999e-29 319300000.0 7102.0 8831.9 7849.9 9382.3 11470.199999999999 9068.6 9414.0 11581.900000000001 10487.6 11299.3 11367.0 True False 7822.989811783926 9576.195208555748 8382.64141928341 9961.823362250692 10664.572722041825 8994.748328284742 9772.254921538466 11350.889918675226 10046.842643611413 10585.860269649396 9968.93106134987 0.78473707598542 0.9606040155782819 0.8408766564535092 0.9992870149211148 1.0697809681309765 0.9022781151690284 0.980271090390631 1.1386265838153191 1.0078154399686454 1.0618851915519205 1.0 13.28322310170614 -3.987564432734243 0.5303847588937228 1.011580319775494 0.09787742638855292 0.5040740117618536 0.06889119881605457 8.042230355094349 0.5493574157299448 0.011678618153548984 6.208160723114952 0.0001029047844423155 3.987564432734243 -0.9137028933869411 QPS(ph)SPYEDKDKDKK ddPTM_A549_MK2206_60min_R1 4 QPSSPYEDKDKDKK 14 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.54)S(0.458)PY(0.002)EDKDKDKK;QPS(0.482)S(0.482)PY(0.036)EDKDKDKK;QPS(0.5)S(0.5)PYEDKDKDKK;QPS(0.481)S(0.481)PY(0.039)EDKDKDKK 57.678999999999995 0.0020280000000000003 1615950000.0 6412.1 6861.49 6958.56 6409.19 8210.06 6855.49 6408.65 6952.5199999999995 9750.33 8701.4 9397.3 True False 7494.305719206226 7210.710533206637 7945.388443082528 7979.441837719468 7002.371049800715 7580.933401494033 7573.018750090742 7938.061001199519 7541.8958230775315 6735.747696615242 7063.6910577141425 1.0609617065601724 1.0208134067998256 1.1248210571731472 1.12964196374433 0.9913189850161325 1.0732255048463677 1.072105035202576 1.1237837182205883 1.067698992135443 0.9535733714258696 1.0 12.786206530359323 -10.360721663056761 0.84706979819109 1.0020312415487396 1.0737448671786773 0.396367736925197 0.04352382607230826 0.555990784580285 0.7535523574664593 0.022893301907402543 0.007852776934236473 4.3579108030993794e-11 10.360721663056761 0.07171362562993777 QPSAT(ph)RLPK ddPTM_A549_MK2206_60min_R1 1 QPSATRLPK 9 1 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67;Q6P582 H7BZ50;Q6P582 MZT2B;MZT2A Mitotic-spindle organizing protein 2B;Mitotic-spindle organizing protein 2A 1 QPS(0.356)AT(0.644)RLPK 40.589 0.038488999999999995 21380000.0 1268.3 1438.8 1429.5 1130.7 1898.0 1079.1 1163.8 656.16 1721.0 2165.5 1732.2 True False 1482.3580330420998 1512.0287743883193 1632.2245952304052 1407.7215507590522 1618.8067142653974 1193.2896457513928 1375.2473955287949 749.1726894057231 1331.196247872271 1676.3120459949323 1302.04693371207 1.1384827955594288 1.161270561943264 1.253583532950702 1.0811603747229825 1.2432783122880688 0.9164720678304462 1.0562195262869933 0.5753807101790637 1.0223872991099465 1.2874436416941217 1.0 10.34656573763052 -7.263758730472197 24.999998751818122 0.9724747599080403 1.173852290909829 0.2706497063500952 0.1627786056719936 180.78464115662226 1948654.787531093 0.01973828751785261 0.03247514377498864 5.448052318563918e-08 7.263758730472197 0.20137753100178868 QPSGS(ph)FSTPGSATYVR ddPTM_A549_MK2206_60min_R1 2 QPSGSFSTPGSATYVR 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QPS(0.001)GS(0.988)FS(0.009)T(0.003)PGSATYVR;QPS(0.004)GS(0.861)FS(0.107)T(0.027)PGS(0.001)ATYVR 161.19 1.8024e-20 44132000.0 5044.4 6490.200000000001 5799.8 6840.4 10472.7 8692.4 8598.2 10365.5 15020.699999999999 14074.3 15773.6 True False 5895.771396260799 6820.5234581144505 6622.298850939001 8516.298307077228 8932.179703101798 9612.223998451866 10160.381643096478 11834.841368012405 11618.535433128998 10894.905854974128 11856.579790786704 0.49725734573491237 0.5752521872635159 0.558533655387276 0.7182761350532907 0.753352135330178 0.8107079923605928 0.8569403506221688 0.9981665519772245 0.9799230164298577 0.9188911176088187 1.0 13.533400282309273 -6.890627827600964 0.5450004388629881 1.0014349222732186 0.46859295262002315 0.9500763158513591 0.0391003808095264 0.12042718710415433 0.05869846275798034 0.006519661955530698 0.029927852657598845 1.2863885695015222e-07 6.890627827600964 -0.5328419696531954 down QPSGS(ph)FSTPGSATYVR ddPTM_A549_PD325901_60min_R1 2 QPSGSFSTPGSATYVR 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QPSGS(0.991)FS(0.007)T(0.001)PGSATYVR;QPS(0.001)GS(0.994)FS(0.005)TPGSATYVR 239.55 2.6693999999999995e-65 88599000.0 10415.9 12025.5 10733.1 12049.3 13248.5 10455.3 10764.3 12331.400000000001 13306.099999999999 12680.5 13706.099999999999 True False 11473.314500219683 13038.931088495914 11461.512709373466 12793.557895054215 12317.97106484378 10370.15550324366 11173.941326950975 12085.440553203844 12746.89089020918 11879.851065932333 12020.336590126459 0.9544919490560605 1.0847392658876234 0.953510130389193 1.0643260942928072 1.0247609101863087 0.8627175641455613 0.9295863924583679 1.0054161514188265 1.060443756681449 0.9883126796707572 1.0 13.55318967410998 -8.524260431052362 24.892107827383175 1.0287737855313281 0.9838376224360645 0.04903329525023359 0.0611974894923002 79.67592042861469 1435409.3586022884 0.010598214105817405 0.012061308853937368 2.990470819153697e-09 8.524260431052362 -0.044936163095263604 QPSPS(ph)HDGS(ph)LS(ph)PLQDR ddPTM_A549_MK2206_60min_R1 2 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 3 QPS(0.11)PS(0.903)HDGS(0.987)LS(1)PLQDR;QPS(0.483)PS(0.702)HDGS(0.827)LS(0.988)PLQDR 65.225 0.0010474 13872700.0 1253.35 1624.05 1198.63 1046.92 1959.09 1662.33 1031.28 1783.85 1938.52 1527.8 2068.43 True False 1464.8848385345088 1706.7072081215936 1368.6137576642325 1303.4154469980247 1670.91045619083 1838.236657234652 1218.6502268954596 2036.7162003115063 1499.4483151803329 1182.668918896817 1554.7817452361498 0.9421803690601044 1.0977149772634927 0.8802610153210662 0.8383269555303751 1.0746913264903568 1.182311705721403 0.7838079078490617 1.3099692008553634 0.9644108054231029 0.7606655548410661 1.0 10.602496358802565 -6.79187007715674 24.999284448256518 1.0132273632208335 0.9466729831486365 0.043533789925727095 0.15908407085061435 520.0589367433755 427234.97563657747 0.019186027933390675 0.03626118182444794 1.61484157799913e-07 6.79187007715674 -0.06655438007219705 QPSPS(ph)HDGS(ph)LS(ph)PLQDR ddPTM_A549_PD325901_60min_R1 2 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 3 QPS(0.116)PS(0.889)HDGS(0.996)LS(1)PLQDR;QPS(0.111)PS(0.901)HDGS(0.994)LS(0.994)PLQDR 72.316 0.00031199 48420000.0 2461.85 2859.3 2770.6 2430.3 2713.8 1878.76 2539.6 2880.4 2570.1000000000004 2287.27 2597.6 True False 2711.7751996818183 3100.263245714224 2958.629576971248 2580.414111388235 2523.192050101751 1863.4600014608916 2636.245867722444 2822.9481623699116 2462.087634763503 2142.8513818520596 2278.1116675430985 1.1903609635634842 1.3608916937148217 1.298720172116091 1.1326986943406354 1.1075804957458328 0.8179844860153843 1.1572066046110843 1.2391614522629653 1.0807580988419323 0.9406261389122709 1.0 11.153622750875 -6.457885596591152 2.49307093809235 1.050768013854766 1.2921096317741099 0.46013306236181617 0.11080073855480393 0.1918008742059176 2.332968338469092 0.015613165937852565 0.0404831371021854 3.484290873868806e-07 6.457885596591152 0.24134161791934394 QPSPS(ph)HDGSLS(ph)PLQDR ddPTM_A549_MK2206_60min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(0.467)PS(0.532)HDGS(0.011)LS(0.99)PLQDR 111.33 4.5688e-07 32981000.0 577.79 787.76 690.88 626.03 967.39 740.98 479.47 1046.2 1340.6 1147.0 1114.0 True False 675.3068263907553 827.8536192049924 788.8571726847024 779.4073781035545 825.0882124937837 819.3900117772841 566.583492639793 1194.5020538531264 1036.9562404982944 887.8919033739029 837.3630551640957 0.806468379785895 0.9886435926442446 0.9420730563878439 0.9307878742641879 0.9853410744663119 0.9785361399980926 0.6766282428459436 1.4265043656828675 1.2383591968899141 1.0603428201163057 1.0 9.709709456900777 -8.253543517609277 24.97404336341796 1.1392494672694902 0.9134929666999403 0.48714845501853765 0.1354018728686885 512.3406868081025 1620497.592778384 0.02381937373325861 0.030464971430861562 5.577717089432537e-09 8.253543517609277 -0.22575650056954988 QPSPS(ph)HDGSLS(ph)PLQDR ddPTM_A549_PD325901_60min_R1 3 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 2 QPS(0.152)PS(0.849)HDGS(0.15)LS(0.85)PLQDR;QPS(0.307)PS(0.693)HDGS(0.445)LS(0.555)PLQDR;QPS(0.343)PS(0.657)HDGS(0.539)LS(0.462)PLQDR 73.994 0.00019725 20005800.0 4100.52 3868.43 3798.66 4312.889999999999 4765.89 3674.3 4335.47 4598.99 5051.6 4620.1 4977.48 True False 4516.80177175672 4194.436172356265 4056.4599107982417 4579.287420016136 4431.150327827933 3644.377719010281 4500.458683310214 4507.259536612139 4839.2988194122045 4328.3860975288035 4365.281514845404 1.0347103059438498 0.9608626976500532 0.9292550542280207 1.0490245370070506 1.015089247453692 0.8348551420146717 1.0309664263358733 1.0325243678520841 1.1085880264433732 0.9915479867240803 1.0 12.091858980206432 -7.980250984208538 24.999710449720727 1.0503726001425335 0.9704768380324085 0.1812113295230935 0.0619209079973408 256.80795323618224 325085.05109574745 0.010091032482352044 0.01394190625427192 1.0465235742046632e-08 7.980250984208538 -0.07989576211012506 QPSPS(ph)HDGSLSPLQDR ddPTM_A549_MK2206_60min_R1 1 QPSPSHDGSLSPLQDR 16 0 Q96A00-2;Q96A00;A0A0B4J2A3 Q96A00-2 PPP1R14A Protein phosphatase 1 regulatory subunit 14A 1 QPS(0.364)PS(0.621)HDGS(0.014)LS(0.001)PLQDR 113.33 2.2991e-07 16362000.0 6053.5 5208.2 6434.0 4420.9 7060.4 4724.4 4646.4 4844.7 7165.3 8012.7 8990.6 True False 7075.182806134477 5473.275133979181 7346.437947332931 5504.0206984617425 6021.824512855327 5224.332872197088 5490.590736024226 5531.4510612714985 5542.370990632875 6202.625504938166 6757.985892063124 1.046936604949691 0.809897389754429 1.08707506417865 0.8144469056861907 0.8910679319303734 0.7730606360591511 0.8124596327542822 0.8185058610092509 0.8201217166111695 0.9178216119425171 1.0 12.722377623404137 -5.240061395952017 23.036145466454926 0.890286678034386 1.0469370708326393 0.20769444465585807 0.09224975127496986 2503.9262822401606 2698017.8310625744 0.01383973992487077 0.7529651230662486 5.753585934861458e-06 5.240061395952017 0.15665039279825332 QPSPS(ph)PS(ph)PTER ddPTM_A549_PD325901_60min_R1 1 QPSPSPSPTER 11 0 H3BT57;P29590-12;P29590-13;P29590-11;P29590-14;P29590-10;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590 H3BT57;P29590-2 PML Protein PML 2 QPS(0.331)PS(0.604)PS(0.532)PT(0.532)ER 48.659 0.03439 3496100.0 533.94 453.07 435.58 730.86 664.85 387.85 504.78 680.27 525.85 604.26 587.95 True False 588.1451957341469 491.2517989493033 465.14107815532265 776.0035622965089 618.1532296079848 384.69147819125766 523.9896791262146 666.7014811885089 503.75035319263384 566.1069204763434 515.6358773221305 1.1406211662163261 0.9527106637740922 0.902072758340548 1.504944858233207 1.198817337572128 0.7460525830535477 1.0162009708235746 1.292969536276088 0.9769497727907878 1.0978811703644942 1.0 9.010208837946701 QPSS(ph)PGPTPR ddPTM_A549_MK2206_60min_R1 2 QPSSPGPTPR 10 0 Q13424-2;Q13424 Q13424-2 SNTA1 Alpha-1-syntrophin 1 QPS(0.024)S(0.97)PGPT(0.005)PR;QPS(0.089)S(0.743)PGPT(0.168)PR 88.338 0.00070588 61890000.0 1788.83 2143.48 1741.17 1987.48 1959.29 1929.5 1463.15 1851.55 2342.0 2521.8 2605.4 True False 2090.7407713054495 2252.5739764566806 1988.0940877770702 2474.4126892213676 1671.0810364557683 2133.6784093015594 1728.9854156796314 2114.0128826340615 1811.5407394054957 1952.1236285338352 1958.4072746180743 1.0675720001669124 1.1502071125098197 1.0151586513917465 1.2634821782429928 0.8532857583372999 1.0894967747286715 0.8828528356119467 1.0794551828073315 0.9250071539684103 0.9967914508051118 1.0 10.935465106790138 -6.768311012940973 24.999974208682552 0.9695616461675524 1.1181875446018945 0.3931563846262487 0.08865937863844871 110.9953395238581 403818.10779992276 0.011328380981768924 0.02174660401103678 1.7048610431799506e-07 6.768311012940973 0.14862589843434215 QPSS(ph)PGPTPR ddPTM_A549_PD325901_60min_R1 2 QPSSPGPTPR 10 0 Q13424-2;Q13424 Q13424-2 SNTA1 Alpha-1-syntrophin 1 QPS(0.006)S(0.992)PGPT(0.003)PR;QPS(0.022)S(0.978)PGPTPR 114.76 9.3314e-05 62041000.0 9221.1 10191.8 11005.3 9759.5 12016.7 9111.9 10518.1 10559.3 10770.9 11711.1 11245.0 True False 10157.219283784963 11050.698754125207 11752.18583824503 10362.322149567337 11172.688447364471 9037.695707440818 10918.372051225168 10348.686477889403 10318.236529813701 10971.659147371167 9861.93628792815 1.0299416856118067 1.1205404731373294 1.1916712393113618 1.0507391091394194 1.132910223831074 0.9164220335213205 1.107122550019937 1.0493564525008214 1.0462688288144897 1.1125258597341996 1.0 13.267655217141455 -7.161986355583917 24.172735908799563 1.0251343223930185 1.107798152979901 0.19576618887953146 0.06395194986206254 28.842287850185663 7004.974443657 0.008141667623694114 0.014101784312458236 6.886739323688269e-08 7.161986355583917 0.08266383058688254 QPSS(ph)PYEDKDK ddPTM_A549_MK2206_60min_R1 3 QPSSPYEDKDK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.43)S(0.57)PYEDKDK;QPS(0.069)S(0.93)PY(0.001)EDKDK;QPS(0.009)S(0.991)PYEDKDK 116.78 5.185900000000001e-06 122912100.0 28022.7 27352.55 25418.4 22913.1 35926.9 29937.5 24131.59 30121.4 37295.0 39823.5 38001.8 True False 32752.24667076314 28744.677962812922 29023.111333616314 28526.81052860816 30642.100602076633 33105.46637909583 28515.987538639547 34391.2006929187 28847.74204787699 30827.343691378068 28564.904263675893 1.1465904582922763 1.006293516599166 1.0160409104021781 0.9986664147474082 1.0727184771643774 1.1589559717584585 0.9982875235784161 1.2039669510340953 1.009901583481264 1.0792034661421628 1.0 14.80195607423408 -8.958321822325468 24.99997637369685 1.0043680516477376 1.070918493927142 0.043432579823839856 0.07037881422643337 177.79055332628417 106645.16534010034 0.01104740016146529 0.01174990459704509 1.1007233456205313e-09 8.958321822325468 0.06655044227940432 QPSS(ph)PYEDKDK ddPTM_A549_PD325901_60min_R1 2 QPSSPYEDKDK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.04)S(0.96)PYEDKDK;QPS(0.082)S(0.918)PYEDKDK 119.0 4.08e-06 120912000.0 25676.0 28710.0 29511.0 23909.0 37884.0 22760.0 29507.0 24638.0 28556.0 32731.0 32124.0 True False 28282.608618327802 31129.49245775378 31513.79392405925 25385.804628721296 35223.15853270499 22574.650106053938 30629.905031849954 24146.57576186292 27355.89062616495 30664.359074092594 28172.951650814048 1.0038922782700543 1.1049425294013984 1.1185833246957164 0.9010701094923358 1.2502473638287463 0.8012880718304732 1.0872096545469674 0.8570836333070274 0.9709983875748607 1.0884326020985648 1.0 14.78202310083821 -7.264793872918744 24.992289341738072 0.9720626781578833 1.0700445938632366 0.1856164508072926 0.11238812504677848 375.80340252676604 2799883.150999665 0.01413458257981791 0.023158577492229875 5.435082329579707e-08 7.264793872918744 0.0979819157053533 QPSS(ph)PYEDKDKDK ddPTM_A549_MK2206_60min_R1 3 QPSSPYEDKDKDK 13 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.136)S(0.864)PYEDKDKDK;QPS(0.028)S(0.972)PYEDKDKDK;QPS(0.026)S(0.974)PYEDKDKDK 135.23 7.398899999999999e-09 161722000.0 9507.6 9355.900000000001 8036.2 7526.900000000001 11456.3 9276.7 8704.4 9930.0 12042.6 11304.699999999999 11318.5 True False 11112.250441497335 9832.075347720098 9175.853999433772 9370.990837895386 9771.093446068844 10258.354236624908 10285.876808421413 11337.6079093496 9314.970328080539 8750.960418544875 8507.804075291577 1.3061243939278773 1.155653710488524 1.0785220155788906 1.1014582323434883 1.1484859500286473 1.2057581657783223 1.2089931452810165 1.332612717572606 1.094873629628254 1.028580388206103 1.0 13.05457109477545 -9.174175746500584 2.488889014096567 1.0338688610916544 1.1839434872876031 0.4404408978522224 0.07550813523251923 0.18723884197205667 2.4039187955337753 0.0158705223729557 0.015020010438897191 6.696135812016439e-10 9.174175746500584 0.1500746261959487 QPSS(ph)PYEDKDKDK ddPTM_A549_PD325901_60min_R1 4 QPSSPYEDKDKDK 13 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.026)S(0.974)PYEDKDKDK;QPS(0.15)S(0.85)PYEDKDKDK;QPS(0.028)S(0.972)PYEDKDKDK;QPS(0.002)S(0.998)PYEDKDKDK 174.87 2.1895e-22 338068000.0 32297.1 36252.0 37111.4 28649.6 42728.700000000004 23702.8 33468.799999999996 32228.7 31614.0 35864.6 35172.399999999994 True False 35575.87781613163 39307.08326640509 39630.00277297725 30419.22072403754 39727.583518012674 23509.772255438296 34742.473498830106 31585.873295573972 30285.373520646426 33600.10303530908 30846.41777621376 1.15332282906331 1.2742835667847145 1.2847521893947982 0.9861508375048451 1.2879156278771322 0.7621556715596037 1.1263049651626216 1.0239721683316636 0.9818116884872135 1.0892708281095362 1.0 14.912815337106775 -6.725893344587133 1.2517862956951362 0.9941668359109206 1.2325443241048597 0.3082153185176717 0.12757227421007633 0.3250025848453454 1.0017629393369991 0.017165901227854767 0.050234242505263337 1.8797784020492982e-07 6.725893344587133 0.2383774881939391 QPSS(ph)PYEDKDKDKK ddPTM_A549_MK2206_60min_R1 4 QPSSPYEDKDKDKK 14 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.052)S(0.948)PYEDKDKDKK;QPS(0.001)S(0.999)PYEDKDKDKK;QPS(0.109)S(0.891)PYEDKDKDKK;QPS(0.056)S(0.943)PY(0.002)EDKDKDKK 138.05 4.1964999999999994e-10 1123570000.0 23843.500000000004 24513.600000000002 23211.2 20168.700000000004 29069.2 22065.600000000002 20494.8 21740.6 27761.100000000002 31825.300000000003 33210.4 True False 27867.69988239321 25761.237533948777 26502.897184198624 25110.032405407354 24793.159187736386 24400.567146040168 24218.439871011793 24822.396627795148 21473.255175367165 24635.942626369222 24963.341119588604 1.1163449535417185 1.0319627252833583 1.061672676635498 1.0058762681291744 0.9931827261808847 0.9774559835219 0.9701601943021846 0.9943539412004887 0.8601915533861456 0.9868848287714791 1.0 14.607523418480207 -6.439681463183939 0.6225957782760223 0.9385469074994272 1.1033790715055976 0.5396092073626717 0.04070657876894392 0.7848400692512363 0.4341189279366093 0.01010437054585973 0.07048858324962753 3.6334445500386754e-07 6.439681463183939 0.1648321640061704 QPSS(ph)PYEDKDKDKK ddPTM_A549_PD325901_60min_R1 7 QPSSPYEDKDKDKK 14 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.272)S(0.728)PYEDKDKDKK;QPS(0.096)S(0.904)PYEDKDKDKK;QPS(0.109)S(0.891)PYEDKDKDKK;QPS(0.087)S(0.913)PYEDKDKDKK;QPS(0.41)S(0.561)PY(0.029)EDKDKDKK;QPS(0.209)S(0.79)PY(0.001)EDKDKDKK;QPS(0.313)S(0.674)PY(0.012)EDKDKDKK 196.31 9.425399999999999e-32 4072691000.0 74807.3 76409.6 82974.2 66042.74 90703.2 59836.49999999999 83880.99999999999 80467.0 73721.0 91480.80000000002 85480.59999999999 True False 82401.68202577626 82848.9051515145 88605.32817639764 70122.0500558549 84332.5201410528 59349.211382728376 87073.13735644432 78862.02255985979 70622.76274168317 85704.68667578905 74967.0281061691 1.099172317583113 1.1051379152203151 1.1819239793114624 0.9353718805092194 1.1249281487005218 0.7916708569356302 1.1614857832316683 1.0519561005963123 0.9420509859570058 1.1432317492219801 1.0 16.193968590532418 -6.262366206970962 24.998644983742846 0.98719994508667 1.1263840567124468 0.12764808025183372 0.10671989953071552 73.76349811058759 1989607.742103054 0.012419119383710238 0.030495476659863872 5.465549010263134e-07 6.262366206970962 0.13918411162577682 QPSS(ph)SPSSIIR ddPTM_A549_MK2206_60min_R1 1 QPSSSPSSIIR 11 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 QPS(0.04)S(0.574)S(0.369)PS(0.012)S(0.004)IIR 57.175 0.013755000000000002 11897000.0 673.34 1069.6 739.65 695.1 1355.0 1177.1 821.87 932.11 1251.4 1124.9 1396.9 True False 786.9833304175417 1124.0380713690197 844.5434920336963 865.3995312042247 1155.6812949576465 1301.659940704258 971.1931405424041 1064.2394469671551 967.9598980751648 870.7843087230204 1050.0111775212981 0.7494999551103148 1.0705010531625698 0.8043185730911573 0.8241812560958868 1.1006371357739237 1.2396629374717827 0.9249360019528979 1.0135505885560616 0.9218567561920368 0.8293095610454658 1.0 10.036188970333214 -5.2450585363736355 23.748604682626418 0.9755323536086256 0.7494996030552091 0.20513867447639222 0.12631949661472042 1820.2529626144662 2638879.549960666 0.01611891220613103 0.5505843221679488 5.687762631791185e-06 5.2450585363736355 -0.22603275055341643 QPSSPYEDKDKDKK ddPTM_A549_MK2206_60min_R1 2 QPSSPYEDKDKDKK 14 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ; 60.918 0.0019253 21615000.0 3181.0 3325.1 3109.0 3093.3999999999996 4413.7 3356.2000000000003 3696.2 3344.8999999999996 4617.5 4202.4 3906.8 False True 3717.8750320168124 3494.3333873495944 3549.902949682633 3851.283138868002 3764.4505767930364 3711.3508563347473 4367.751695612245 3819.049818326631 3571.6436226323117 3253.074921306445 2936.6337378052876 1.2660329356548872 1.189911204235196 1.2088340823652308 1.3114618582793656 1.28189311739176 1.2638112845180514 1.4873328053761696 1.3004855761075682 1.2162373457241566 1.1077564353454754 1.0 11.519947626047564 -9.982254770217223 0.8066220235877574 1.0177500323515665 1.2850685456370134 0.5429448676502115 0.07948902888865626 0.2727378259646415 0.35996214853933495 0.03624015494061704 0.016843992095493452 1.0417061539247951e-10 9.982254770217223 0.267318513285447 QPSSPYEDKDKDKK ddPTM_A549_PD325901_60min_R1 2 QPSSPYEDKDKDKK 14 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ; 45.14 0.014008000000000001 10118800.0 2984.4 2947.1000000000004 3126.8 2725.6 3717.1 2703.8 3188.0 2994.0 3093.0 3820.0 3949.5 False True 3287.37409100084 3195.4624598483488 3339.0034509758534 2893.9541217132783 3456.0237192988498 2681.781149242033 3309.3210845405383 2934.2823212524363 2963.011966197236 3578.8045480747223 3463.736537943281 0.9490831808336201 0.9225477818084197 0.963988864164163 0.8355006479308235 0.9977732663671323 0.7742451309054925 0.955419399913588 0.8471436233989011 0.8554380316571744 1.033220774406753 1.0 11.758113483243493 -10.931767403037878 1.2094563718598577 0.9995770648939734 0.8961493837435193 0.31329392780137244 0.06474668325458836 0.47943917428943544 1.2544587404745553 0.04062080343742394 0.009720166465376623 1.1701259125942792e-11 10.931767403037878 -0.10342768115045409 QPSSS(ph)PSSIIR ddPTM_A549_MK2206_60min_R1 1 QPSSSPSSIIR 11 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 QPS(0.034)S(0.154)S(0.708)PS(0.085)S(0.019)IIR 90.79299999999999 0.00029802 9733600.0 1226.9 1378.0 945.33 1138.3 1376.1 1379.9 1212.8 1428.8 2131.4 1719.4 1873.2 True False 1433.970725174921 1448.134314086116 1079.3920088206767 1417.183551100228 1173.6775129086477 1525.9201020965122 1433.1500612625207 1631.336775516486 1648.6413031464006 1330.9863458248385 1408.03274231004 1.0184214344492635 1.028480567653764 0.7665958158400561 1.0064990028393623 0.8335583950861075 1.0837248710516947 1.0178385901106766 1.1585929264969292 1.1708827881669956 0.9452808204170039 1.0 10.459465167372448 -7.289860308316315 23.234920288028597 1.0840165011746237 0.9312356244734058 0.30279642324043377 0.0968424169904154 242.39354205424473 198163.10870613134 0.014362307962339907 0.022963846702661727 5.130263734084992e-08 7.289860308316315 -0.15278087670121787 QPSSS(ph)PSSIIR ddPTM_A549_PD325901_60min_R1 2 QPSSSPSSIIR 11 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 QPSS(0.017)S(0.955)PS(0.025)S(0.003)IIR;QPS(0.002)S(0.233)S(0.532)PS(0.214)S(0.02)IIR 147.96 1.5388e-11 43595000.0 6498.6 8139.3 7680.7 6734.1 9154.7 7055.7 7397.4 8168.3 7662.200000000001 8117.0 8976.0 True False 7158.333087983534 8825.227375875835 8201.958489801153 7150.050062749254 8511.70545400048 6998.240718509876 7678.912105012599 8005.376848592617 7340.18438001825 7604.491234744117 7872.008903552074 0.9093400649932561 1.1210896080025572 1.0419142801147234 0.9082878526119232 1.0812621731359775 0.8890031508160606 0.9754704547587154 1.0169420470269492 0.9324410668166483 0.9660165947364153 1.0 12.942516137085068 -6.216363438916919 24.972427700802683 0.9707055931634173 1.0338121828325169 0.10354591047538564 0.06773958328740246 612.3890934370523 339267.4210202657 0.008602250667965881 0.02275933417939781 6.076262969754226e-07 6.216363438916919 0.06310658966909954 QPT(ph)ETPVASQSSDKPSR ddPTM_A549_MK2206_60min_R1 1 QPTETPVASQSSDKPSR 17 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 QPT(0.613)ET(0.376)PVAS(0.009)QS(0.001)S(0.001)DKPSR 54.658 0.0048796 3135500.0 1098.9 1189.7 1227.3 1091.2 1391.8 1156.2 849.43 870.98 1566.2 1433.4 1505.2 True False 1284.3674544744658 1250.2506483804436 1401.3495947717902 1358.544048985829 1187.0680637063108 1278.5483165765554 1003.760435799986 994.4440822643811 1211.4582007074662 1109.5939444604644 1131.4172985933542 1.1351845654748858 1.1050305222792953 1.2385789014486803 1.2007453400923358 1.0491867723625448 1.130041336796002 0.8871708405447938 0.8789366076519545 1.0707439264130252 0.9807114897747967 1.0 10.143915418741264 -7.134341385164989 1.8590712220084475 1.0128096799013175 1.1666016497935134 0.5340701114203952 0.07618667741141896 0.25661396507268747 1.736750482934285 0.012511577292817667 0.024617585175287556 7.339367168918666e-08 7.134341385164989 0.1537919698921959 QPT(ph)PPFFGR ddPTM_A549_MK2206_60min_R1 4 QPTPPFFGR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 QPT(1)PPFFGR;QPT(1)PPFFGR;QPT(1)PPFFGR;QPT(1)PPFFGR 137.78 4.6013e-05 2028690000.0 29761.5 35902.7 32054.699999999997 29078.0 44027.8 32425.9 29953.4 30757.5 48457.2 46739.8 47681.6 True False 34784.51360118464 37729.9940771695 36600.538462911536 36202.11130536104 37551.36894327398 35857.1872154296 35395.5450569103 35117.469815893266 37481.72157024761 36181.246717799084 35840.94277478665 0.9705245149314212 1.052706518192143 1.0211935186219276 1.0100769818708135 1.047722689083128 1.000453236979424 0.987572935213365 0.9798143435165904 1.0457794541223735 1.0094948379329973 1.0 15.12932096668326 QPT(ph)PPFFGR ddPTM_A549_PD325901_60min_R1 2 QPTPPFFGR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 QPT(1)PPFFGR;QPT(1)PPFFGR 141.44 4.1808000000000004e-05 2886600000.0 24533.0 25961.0 27367.0 21472.0 31478.0 20506.4 27244.0 27253.0 26548.0 28624.0 27199.0 True False 27023.57209975996 28148.824580137418 29224.28919113987 22798.276673549844 29267.093873204725 20339.40267727525 28280.78532848884 26709.417535435085 25432.279883156854 26816.6757549976 23853.695428666757 1.132888284776359 1.1800613730612526 1.225147243056473 0.9557544968965883 1.2269417105926608 0.8526730266217737 1.1855934613176002 1.1197182262726635 1.0661777735534006 1.1242147295454274 1.0 14.541925166267454 -2.0000000016960495 0.09318792515515786 0.9442453187167837 1.5691635968560536 0.034576860592030356 0.11108644870139119 152.90232745097606 0.9891068820748847 0.8110221817055303 12.247551580845334 0.009999999960947017 2.0000000016960495 0.6249182781392698 QPT(ph)PPSEAAASK ddPTM_A549_MK2206_60min_R1 2 QPTPPSEAAASK 12 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 QPT(1)PPSEAAASK;QPT(0.954)PPS(0.046)EAAASK 136.81 2.8497e-08 115239000.0 16270.2 18168.7 16005.4 15009.6 22057.8 15758.8 14985.1 16027.8 24296.0 23493.2 24140.6 True False 19016.21199180129 19093.40922520784 18275.2063913961 18686.952673806543 18813.126839790977 17426.38575615516 17707.698699723784 18299.789733078902 18792.99479273949 18186.069803263978 18145.822773334257 1.047966368311835 1.0522206385298818 1.0071302150185206 1.0298211829373474 1.0367745279336322 0.9603524719619587 0.975855375692619 1.0084849809054073 1.0356650688970834 1.0022179776818312 1.0 14.147349852960678 -5.698847574712636 1.2150295259436383 1.0109543507989145 1.0587000688647699 0.30842452201997095 0.023249724599241593 0.9211104515848143 1.8267433759002731 0.0038653141153053606 0.04517517242535065 2.000563888729169e-06 5.698847574712636 0.04774571806585537 QPT(ph)PPSEAAASK ddPTM_A549_PD325901_60min_R1 2 QPTPPSEAAASK 12 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 QPT(0.999)PPS(0.001)EAAASK;QPT(0.996)PPS(0.004)EAAASK 100.11 0.0002614 110186000.0 19988.5 22749.0 22740.0 20227.7 25729.0 21742.0 20982.6 22403.0 22642.0 24561.0 26124.0 True False 22017.717805244018 24666.138067622436 24283.273146728578 21477.119088560194 23921.883800231393 21564.940360537126 21781.104325119297 21956.15459018648 21690.43547967598 23010.214268393524 22910.913613680295 0.9610143958683977 1.0766108450993452 1.0598998170124843 0.9374187101703368 1.0441261402141309 0.9412518734154941 0.9506868513577573 0.9583273264614066 0.9467293991595535 1.0043342075478794 1.0 14.483747369385638 -6.2551693947431515 24.973215551442337 0.971981322811996 1.0369186028398927 0.2959045721770477 0.040807876089631684 428.3146326113744 1705963.166857744 0.005438914384145238 0.013999957374148863 5.556874714248188e-07 6.2551693947431515 0.06493728002789667 QPTET(ph)PVASQSSDKPSR ddPTM_A549_MK2206_60min_R1 1 QPTETPVASQSSDKPSR 17 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 QPT(0.026)ET(0.972)PVAS(0.001)QSSDKPSR 69.03 0.00062989 4564300.0 1310.9 1196.9 1226.6 1333.1 1327.9 1214.2 1113.3 1311.2 1484.3 1572.6 1664.8 True False 1532.1478715720964 1257.8170976267572 1400.5503242459693 1659.709559845132 1132.567669058494 1342.685838079271 1315.572199211382 1497.06661538159 1148.1084199400402 1217.3485677818662 1251.3842138574394 1.224362473655627 1.005140614447651 1.1192008886932652 1.3262989427755478 0.9050519069337715 1.0729605050237856 1.0512935872477411 1.1963285127010077 0.9174707553653345 0.9728016018592268 1.0 10.289309094408718 -8.773043225315913 24.996378980843634 0.9610278513942031 1.1060619620966563 0.271845328574168 0.10831778746438794 205.2766007210263 442194.3686695253 0.018204319072690524 0.01946028363959691 1.6863851711733917e-09 8.773043225315913 0.1450341107024532 QPTETPVASQSSDKPS(ph)RDPETPR ddPTM_A549_MK2206_60min_R1 2 QPTETPVASQSSDKPSRDPETPR 23 2 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 QPTETPVASQS(0.009)S(0.009)DKPS(0.584)RDPET(0.398)PR;QPTETPVAS(0.004)QS(0.003)S(0.019)DKPS(0.618)RDPET(0.356)PR 152.14 1.6578e-28 37765000.0 1827.37 2845.3 1976.76 2047.3 3316.5 2628.2 1962.87 1679.13 3761.8 3325.0 3420.1000000000004 True False 2135.785381092913 2990.1136167410937 2257.0942923173516 2548.888591906789 2828.647243340985 2906.3143795420337 2319.4980711991802 1917.151819619959 2909.7583063602005 2573.880190687209 2570.7947800419433 0.8307879717485918 1.163108638602537 0.8779752899142444 0.9914788265849843 1.100300679502249 1.1305120121235879 0.9022494090957104 0.7457428475051906 1.1318516471831046 1.0012001777307231 1.0 11.327998732782815 QPTETPVASQSSDKPSRDPET(ph)PR ddPTM_A549_PD325901_60min_R1 2 QPTETPVASQSSDKPSRDPETPR 23 2 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 QPTETPVASQSSDKPS(0.008)RDPET(0.991)PR;QPTETPVASQS(0.002)S(0.009)DKPS(0.098)RDPET(0.891)PR 227.19 3.9400999999999994e-88 72999000.0 9382.6 8277.3 9691.7 8282.4 11075.4 9202.5 10278.400000000001 10905.3 10921.0 11300.900000000001 10118.8 True False 10335.114644894944 8974.85712018688 10349.437042926535 8793.985037304832 10297.50211205577 9127.557891079148 10669.550136556294 10687.785236457647 10462.02834880051 10587.35924537634 8874.251748358147 1.1646181489957252 1.0113367723478597 1.1662320763935186 0.9909551009674517 1.1603797597877414 1.028543943749158 1.2023041986081024 1.2043590309949261 1.1789194903937814 1.1930424722664803 1.0 13.115409765356414 -4.999696334412636 16.985699654978973 1.097600067362645 1.2323799104608988 0.0 0.08519667203888472 11544715.859473247 372639357.87047386 0.012165070505292256 30591303.023610972 1.0006994603631092e-05 4.999696334412636 0.13477984309825386 QPVYYDELDAASS(ph)SLRR ddPTM_A549_MK2206_60min_R1 1 QPVYYDELDAASSSLRR 17 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 QPVYYDELDAAS(0.093)S(0.454)S(0.454)LRR 76.027 0.00018968 6923200.0 1051.3 1536.3 1263.6 1293.0 1732.9 1144.3 1550.5 1423.8 2097.7 1868.6 2462.1 True False 1228.7337381827324 1614.4911079321482 1442.7974806108007 1609.7850580449765 1477.9927055587498 1265.389066475135 1832.2057800029172 1625.6280102046276 1622.5742993385604 1446.481962200938 1850.6926194968757 0.663931830298633 0.87237129003684 0.7795986569628379 0.8698284313051448 0.7986159830045428 0.6837381060173786 0.9900108536127494 0.8783889842531314 0.8767389474864113 0.7815895232748994 1.0 10.853849583353993 -14.99999999983465 0.04800078119504733 1.7952363244236968 0.42172493067462863 0.0434751637761166 0.10080960538099858 241.88628374329667 0.8873528926368728 25.121967961886423 6.238677341598841 1.0000000003807333e-15 14.99999999983465 -1.3735113937490682 QPVYYDELDAASSS(ph)LRR ddPTM_A549_PD325901_60min_R1 2 QPVYYDELDAASSSLRR 17 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 QPVYYDELDAAS(0.002)S(0.043)S(0.955)LRR;QPVYYDELDAAS(0.007)S(0.048)S(0.945)LRR 158.02 1.4491e-22 32327000.0 3066.0 2968.6 3550.2 3054.0 3364.6000000000004 2938.8 3589.1 3233.8 3457.9 3342.6000000000004 3792.3999999999996 True False 3377.2580629300937 3218.774340302604 3791.1379210868868 3242.6386438627633 3128.2821032398697 2914.8673871560336 3725.685164530879 3169.2993221329784 3312.5764881711657 3131.547665548314 3325.958842004331 1.0154238892790532 0.9677733529507135 1.1398631495999583 0.9749485179764412 0.9405654885839372 0.8763991154500997 1.1201837850421683 0.952897937914065 0.9959763922318712 0.9415473294495555 1.0 11.699554600369758 QQAAYYAQT(ph)SPQGMPQHPPAPQGQ ddPTM_A549_MK2206_60min_R1 2 QQAAYYAQTSPQGMPQHPPAPQGQ 24 0 Q96AE4 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 QQAAYY(0.002)AQT(0.558)S(0.439)PQGMPQHPPAPQGQ;QQAAYY(0.002)AQT(0.564)S(0.434)PQGMPQHPPAPQGQ 78.987 5.694099999999999e-06 28489000.0 1850.63 2317.2 2151.3500000000004 1652.37 2954.3999999999996 2064.48 1887.5099999999998 1688.3000000000002 3243.5 2795.8 3507.3 True False 2162.9711004405126 2435.1355824385673 2456.443779607507 2057.200724177708 2519.8116736700126 2282.941903309085 2230.4461346748203 1927.6216952019058 2508.8524288051763 2164.2268382325706 2636.3406134443744 0.8204444787635368 0.9236801838200516 0.9317626740188809 0.7803243305082566 0.955798981671751 0.8659510427700103 0.8460386807760574 0.73117323511679 0.9516419904207162 0.8209207972580644 1.0 11.364321062284732 -8.974861695696706 20.900880818027527 0.9786662320377439 0.8609964801876223 0.022421164286566486 0.07892354532916178 19.147785411551684 15920.80568927874 0.010940943893705401 0.011359121969868234 1.0595911061110946e-09 8.974861695696706 -0.11766975185012163 QQAAYYAQT(ph)SPQGMPQHPPAPQGQ ddPTM_A549_PD325901_60min_R1 2 QQAAYYAQTSPQGMPQHPPAPQGQ 24 0 Q96AE4 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 QQAAYY(0.002)AQT(0.562)S(0.436)PQGMPQHPPAPQGQ;QQAAYY(0.001)AQT(0.567)S(0.431)PQGMPQHPPAPQGQ 86.546 2.711e-07 78837000.0 4874.6 4917.2 5449.4 6252.3 6453.5 5891.0 5623.0 5917.0 6338.2 5583.6 6615.6 True False 5369.465803509148 5331.589700914903 5819.229053904254 6638.490370996452 6000.22842336637 5843.025649154827 5836.986342023665 5798.980793203295 6071.827495684223 5231.0505430968615 5801.923139743661 0.9254631049363368 0.9189349070126535 1.0029827892827547 1.1441879202987428 1.0341792331346655 1.0070842905742081 1.0060433758661536 0.9994928670253816 1.0465198089391594 0.9016063151998216 1.0 12.50231546840118 -5.825964430211605 4.768546851502283 1.0273956366451167 0.9216496973631076 0.2945971360784164 0.05431879326384073 0.11566487481024329 5.072147586401085 0.005612453367400069 0.019104543505138898 1.492916678127141e-06 5.825964430211605 -0.10574593928200904 QQAAYYAQTS(ph)PQGMPQHPPAPQGQ ddPTM_A549_MK2206_60min_R1 2 QQAAYYAQTSPQGMPQHPPAPQGQ 24 0 Q96AE4 Q96AE4 FUBP1 Far upstream element-binding protein 1 1 QQAAYY(0.001)AQT(0.152)S(0.847)PQGMPQHPPAPQGQ;QQAAYY(0.001)AQT(0.128)S(0.872)PQGMPQHPPAPQGQ 78.991 6.6398e-06 28174000.0 14462.5 9533.5 6246.1 5728.2 7644.2 6018.1 5845.9 5714.7 8807.8 12874.300000000001 18631.9 True False 16903.416425823056 10018.714429129159 7131.890901901804 7131.609257148673 6519.74830621051 6654.93134750853 6908.024359444733 6524.776225534755 6812.8473631664065 9965.986688410327 14005.085015719847 1.2069485052643385 0.7153626284941339 0.5092358164121599 0.5092157062341199 0.46552722092672005 0.4751796465382951 0.4932511549691344 0.46588622762454457 0.4864552664635312 0.7115977287695233 1.0 13.773663120647349 -10.77082031704615 1.0122652731701236 1.000752093481684 0.5734301194480589 0.12603595133591317 0.22356359019695068 0.4802709939168768 0.8713967240352488 0.14658027426612996 0.03687175425688712 1.6950389528259898e-11 10.77082031704615 -0.42732197403362515 QQADKESEVS(ph)PSR ddPTM_A549_MK2206_60min_R1 3 QQADKESEVSPSR 13 1 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 QQADKES(0.016)EVS(0.943)PS(0.041)R;QQADKES(0.004)EVS(0.975)PS(0.021)R;QQADKES(0.005)EVS(0.887)PS(0.107)R 64.507 0.0016562999999999999 69684400.0 3424.6000000000004 3969.99 4306.58 6266.82 4936.3099999999995 3878.3599999999997 3442.42 3695.87 5861.05 6388.8 5399.84 True False 4002.588756568616 4172.0455338016955 4917.317801558134 7802.191181328242 4210.185338090313 4288.7654809529895 4067.863154593775 4219.77089062718 4533.531533173602 4945.565642785696 4058.910699997569 0.9861238771700529 1.027873201005431 1.2114870626646403 1.922237703168221 1.0372697625727108 1.0566296718367216 1.0022056298494597 1.0396313697243222 1.116933056244947 1.2184465262536222 1.0 11.986876884345914 -6.904764636728437 23.39584923726117 1.050153567414439 1.2901193552721058 0.16628427103055743 0.23450069550990577 12.385947884413515 3032.3979047829353 0.033044664780277344 0.06244855285082695 1.2451892517410534e-07 6.904764636728437 0.23996578785766665 QQADKESEVS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 QQADKESEVSPSR 13 1 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 QQADKES(0.004)EVS(0.813)PS(0.184)R 48.31399999999999 0.0091275 49033000.0 2733.7 2783.5 2652.7 2448.6 2829.7 2215.2 2643.0 3180.4 2959.9 3179.8 2920.1 True False 3011.2232115564243 3018.0753136941003 2832.7281739809523 2599.844460825922 2630.9516339350466 2197.1601456472195 2743.5808113050957 3116.9644270244676 2835.5056963295156 2979.0268853319367 2560.946212039039 1.175824465738729 1.1785000791918596 1.1061256033665459 1.015189014358842 1.027335764244837 0.8579485720232402 1.0713152812064108 1.2171143667022681 1.1072101721620584 1.1632524226114143 1.0 11.322461236762072 -5.946091759757641 3.288147140926995 1.0477799913074635 1.1773135097218512 0.2076638960488063 0.08846575778020085 0.2610376966983982 5.729699783846444 0.01244587192910028 0.043746396356295056 1.1321611296951371e-06 5.946091759757641 0.12953351841438776 QQADKESEVS(ph)PSRR ddPTM_A549_MK2206_60min_R1 1 QQADKESEVSPSRR 14 2 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 QQADKES(0.031)EVS(0.937)PS(0.031)RR 48.053000000000004 0.0099946 4766700.0 652.73 861.98 729.5 603.01 817.25 668.73 553.26 606.89 1106.0 989.67 1277.4 True False 762.8948662836634 905.8511001857399 832.9540694092899 750.7474770701479 697.033607604529 739.4945647329524 653.7801804865625 692.9185160226765 855.492765919077 766.1028596443341 960.186325553515 0.7945279431509091 0.9434117900643372 0.867492118187707 0.7818768681561543 0.7259357783529282 0.7701573591007546 0.6808888682201137 0.7216500564338202 0.8909653711490989 0.797868954447671 1.0 9.907170579846833 -9.235116048708381 1.6377307725671402 0.9663824635398475 0.7892469690398825 0.13274055102705884 0.08775913027235219 0.20760353373152096 1.150846505087334 0.01746827028110959 0.015708852829615854 5.819476935706155e-10 9.235116048708381 -0.17713549449996502 QQADKESEVSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 QQADKESEVSPSR 13 1 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 QQADKES(0.003)EVS(0.372)PS(0.625)R 49.463 0.008454600000000001 50051000.0 2520.5 2728.6 2957.4 2856.3 3760.8 2848.3 3265.5 2756.5 2694.7 3162.1 2782.6 True False 2776.37930450597 2958.5486980225314 3158.1069482909006 3032.727163872041 3496.654382055667 2825.104389150856 3389.7703894501656 2701.5194450675826 2581.451130071673 2962.444466352638 2440.3578403547217 1.1376935212511317 1.2123421610957217 1.2941163365745778 1.2427387138564951 1.4328449394730594 1.1576598900512922 1.389046447777282 1.107017749771853 1.0578166395861202 1.213938553340205 1.0 11.2528769966523 -8.47867237309405 4.462245981575059 1.0289689107903524 1.266993165282716 0.36215674160819855 0.10083182322820534 0.09666194639710492 4.245543096630039 0.013409560496735945 0.015994107348802054 3.3214492948876596e-09 8.47867237309405 0.23802425449236364 QQASKS(ph)PYNGVR ddPTM_A549_MK2206_60min_R1 4 QQASKSPYNGVR 12 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 QQAS(0.059)KS(0.941)PYNGVR;QQAS(0.011)KS(0.989)PYNGVR;QQAS(0.048)KS(0.952)PYNGVR;QQAS(0.01)KS(0.99)PYNGVR 117.0 6.369299999999999e-06 209499500.0 13449.5 13876.699999999999 12970.100000000002 11283.100000000002 17639.6 13472.800000000001 13114.199999999999 12853.199999999999 17452.8 18538.3 18579.4 True False 15719.446791295215 14582.964757822057 14809.455209932054 14047.460006517613 15044.838207036822 14898.482753479162 15496.880387045636 14675.18046127413 13499.768666394622 14350.485154591477 13965.622214646151 1.1255815566033125 1.0442044424292447 1.060422155369558 1.0058599459883453 1.077276613659137 1.0667969192131441 1.1096448227558102 1.050807492550088 0.966642836166442 1.027557879916135 1.0 13.769592231433483 -8.669366735409453 5.393245743995827 0.984337417093686 1.0670912984349101 0.45546668836265336 0.033239018452581044 0.10375996552352934 4.848501609686411 0.005280863144905095 0.005972695806306324 2.1410818234895223e-09 8.669366735409453 0.08275388134122408 QQASKS(ph)PYNGVR ddPTM_A549_PD325901_60min_R1 4 QQASKSPYNGVR 12 1 Q9UK58-6;Q9UK58 Q9UK58-6 CCNL1 Cyclin-L1 1 QQAS(0.254)KS(0.746)PYNGVR;QQAS(0.002)KS(0.998)PYNGVR;QQAS(0.086)KS(0.914)PYNGVR;QQAS(0.001)KS(0.999)PYNGVR 148.96 1.7071e-12 379727200.0 14640.1 16282.099999999999 18256.1 14784.8 19531.399999999998 15120.0 16680.399999999998 16969.600000000002 17598.0 17572.699999999997 17018.4 True False 16126.352174528012 17654.249709034928 19495.06872884747 15698.023517282967 18159.581843672095 14996.867733020028 17315.181749865107 16631.128015606333 16858.417258693476 16463.15672302425 14925.244688526125 1.080474894118503 1.182844909913386 1.3061808456537014 1.0517766271095657 1.2167024543076594 1.0047987852788078 1.160127161143044 1.1142951665235759 1.1295236768649757 1.1030409930686367 1.0 13.86546696316881 -14.99999999999276 0.16210997029237234 0.442341734311247 1.1815593233126025 0.10837693726448128 0.08241328571349284 45.454616792277754 0.4731133817509829 8.037344795356208 0.1100214439138029 1.0000000000166717e-15 14.99999999999276 0.7392175890013555 QQDATVEPETEVVGPELPDDLEPQAAPTS(ph)TK ddPTM_A549_PD325901_60min_R1 1 QQDATVEPETEVVGPELPDDLEPQAAPTSTK 31 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QQDATVEPET(0.001)EVVGPELPDDLEPQAAPT(0.181)S(0.636)T(0.181)K 63.331 0.00031726 2461000.0 744.64 889.2 869.57 862.98 545.5 899.81 670.85 864.42 938.71 734.9 851.41 True False 820.2353046250049 964.1360046476718 928.5842493491979 916.2843146302184 507.18596187283697 892.4822456910546 696.3795638532054 847.1784649756283 899.2592831519577 688.4982885811817 746.691967532673 1.0984922033316422 1.2912098248940709 1.2435974802535503 1.2271249115722203 0.6792438969830542 1.1952482208160387 0.932619599691534 1.1345755703988585 1.2043243027287673 0.9220646779638152 1.0 9.544369401244575 QQDLHLES(ph)PQR ddPTM_A549_MK2206_60min_R1 2 QQDLHLESPQR 11 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QQDLHLES(1)PQR;QQDLHLES(1)PQR 123.02 2.2867e-06 60556000.0 3656.7000000000003 3561.0 3214.9 3084.1 5361.2 5309.799999999999 4401.8 5442.700000000001 4943.5 4873.6 4621.1 True False 4273.861562268427 3742.239689739228 3670.821162089002 3839.7046384505097 4572.574581938697 5871.679511640015 5201.550082177905 6214.219392569695 3823.8051431473373 3772.650375137801 3473.5533341281903 1.2304004433376874 1.0773520167291384 1.0567913629028307 1.1054111651964078 1.3163968254100074 1.6903956688817385 1.4974723523234503 1.7890093500261082 1.1008338653038288 1.0861069378353678 1.0 11.762196533797198 -8.974777007626175 24.98608387884987 1.0444852317835462 1.3413547074740013 0.2370194970203493 0.22755321267816594 190.40742703160262 188620.91095843443 0.04412050275305771 0.04580939996945484 1.0597977481013563e-09 8.974777007626175 0.2968694756904551 QQDLHLES(ph)PQR ddPTM_A549_PD325901_60min_R1 2 QQDLHLESPQR 11 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QQDLHLES(1)PQR;QQDLHLES(1)PQR 140.96 1.0066e-11 62714000.0 5389.799999999999 6669.3 5166.9 5122.6 6291.799999999999 5266.4 4725.3 4861.9 5764.299999999999 5854.5 6038.2 True False 5936.968528238947 7231.345316910385 5517.556905093753 5439.011367731302 5849.885673531651 5223.512184469357 4905.123877283377 4764.925590413235 5522.046516893213 5484.84587086478 5295.539679303492 1.1211262473289256 1.3655539859653179 1.0419253256958811 1.027092930487999 1.1046816807727273 0.9863984599878195 0.9262745960442947 0.899799808702397 1.0427731357532783 1.0357482339904187 1.0 12.370562004381018 -5.878023857624018 6.941566772012541 1.0102030876804577 1.2416365595066063 0.6015794717249731 0.0744135858248926 0.09755817470377802 5.495286814620651 0.009783622605338518 0.030920847232218482 1.3242687855376706e-06 5.878023857624018 0.2314334718261486 QQDLHLES(ph)PQRQPEYS(ph)PES(ph)PR ddPTM_A549_PD325901_60min_R1 2 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 QQDLHLES(0.996)PQRQPEY(0.354)S(0.77)PES(0.879)PR;QQDLHLES(0.954)PQRQPEY(0.531)S(0.563)PES(0.951)PR 53.578 0.0021086 13407500.0 1076.05 1055.0900000000001 1297.91 1254.8 1098.21 1116.24 1237.29 1019.6500000000001 1270.63 1386.6399999999999 1154.6100000000001 True False 1185.2898038538576 1144.0061371386773 1385.993977566864 1332.3061461424345 1021.0755182188235 1107.1497115281927 1284.3757480210668 999.3122808500497 1217.2298398348498 1299.0873137545364 1012.6002896758314 1.1705406525543363 1.1297706990632144 1.3687473642838568 1.3157275972821931 1.0083697670535976 1.0933728963109717 1.26839362097382 0.9868773404854193 1.202083242761591 1.2829221233685597 1.0 9.983849086736083 -14.999999999978487 0.19510100284474413 0.2101094887992629 1.2114222933808751 0.0 0.13809994806763973 50.793379466424625 0.5900668927893268 15.431876194735674 0.10315974451175512 1.0000000000495366e-15 14.999999999978487 1.0013128045816122 QQDLHLES(ph)PQRQPEYS(ph)PESPR ddPTM_A549_MK2206_60min_R1 2 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QQDLHLES(1)PQRQPEYS(0.918)PES(0.082)PR;QQDLHLES(1)PQRQPEYS(0.981)PES(0.019)PR 146.1 3.108e-21 330630000.0 2790.2 2655.1 2710.3999999999996 1721.17 2960.4 2451.6 2472.4 2329.8 3708.2 3562.9 3224.6000000000004 True False 3261.1175461594794 2790.2332491509756 3094.775475979355 2142.8567272662563 2524.9290816181665 2711.0266847596263 2921.60307673603 2660.056284713261 2868.2986207785884 2758.0384154584817 2423.842825567454 1.3454327614646417 1.1511609662634559 1.2768053453527157 0.8840741258726563 1.041704955034387 1.1184828719762137 1.205359954002811 1.0974541156935398 1.183368240928362 1.1378784079420612 1.0 11.24308043474102 -14.999674189847347 0.018588044721394387 7.921574050688563e-07 1.9622461905856328 0.10225434289561619 0.11546404188550291 4070.6591468675974 5.880179868517605 406.82149860831373 235.7856300423241 1.0007504870752493e-15 14.999674189847347 1.9622453984282278 QQDLHLES(ph)PQRQPEYS(ph)PESPR ddPTM_A549_PD325901_60min_R1 3 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QQDLHLES(1)PQRQPEY(0.001)S(0.992)PES(0.007)PR;QQDLHLES(1)PQRQPEYS(0.913)PES(0.087)PR;QQDLHLES(1)PQRQPEYS(0.944)PES(0.056)PR 157.61 5.222999999999999e-27 515170000.0 11146.099999999999 12002.2 11221.2 10431.400000000001 13857.5 10356.7 10816.900000000001 11662.8 12397.4 13306.7 13732.900000000001 True False 12277.643866674865 13013.667515724563 11982.738110557202 11075.723886571719 12884.197005779726 10272.358468952938 11228.5430487348 11430.176304710398 11876.380391119817 12466.512691064372 12043.840360025657 1.019412703893454 1.0805247434960887 0.9949266805568714 0.9196172944414653 1.0697748077551137 0.8529138681584995 0.9323058686499296 0.9490474768038231 0.9860957996868133 1.035094481361742 1.0 13.55600787006396 -5.914234851807001 6.3322487026617225 0.9765780602519369 1.0488942366137928 0.22168012477638954 0.057124566869900285 0.2324361531075325 13.869565275186718 0.007342030420335007 0.02330879933853335 1.2183305886677716e-06 5.914234851807001 0.07231617636185583 QQDLHLES(ph)PQRQPEYSPES(ph)PR ddPTM_A549_MK2206_60min_R1 2 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QQDLHLES(1)PQRQPEYSPES(1)PR;QQDLHLES(1)PQRQPEYSPES(1)PR 191.59 1.7663e-45 277750000.0 8307.8 8827.0 7626.200000000001 7553.8 11166.3 9387.6 8320.6 8220.3 13329.5 11345.2 12729.6 True False 9709.953533791026 9276.256596834644 8707.709834309971 9404.481339102964 9523.75206190816 10380.989601015446 9832.345316409077 9385.552698612933 10310.389532837557 8782.311440416403 9568.489000912818 1.0147844171493234 0.9694588765216436 0.9100402198799905 0.9828596070085666 0.9953245555280056 1.0849142011894581 1.0275755467212313 0.9808813803012751 1.0775358086165916 0.91783681201688 1.0 13.224075405507127 -6.927585737631044 3.2549979390189177 1.0352260089149878 0.9648587790707043 0.07235998977340619 0.05073402624460644 0.19882284460320893 4.265784428844688 0.006007380758493545 0.011837420578080687 1.181447050380818e-07 6.927585737631044 -0.07036722984428356 QQDLHLES(ph)PQRQPEYSPES(ph)PR ddPTM_A549_PD325901_60min_R1 1 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QQDLHLES(1)PQRQPEYS(0.329)PES(0.671)PR 107.94 1.695e-10 182420000.0 8239.7 8327.0 8416.0 7766.3 8696.4 6839.1 7516.1 7837.1 9075.7 8683.5 9325.7 True False 9076.188278253456 9028.745513609041 8987.160369519246 8246.006712452974 8085.594864951314 6783.404637096381 7802.129298467736 7680.782892413989 8694.279890596905 8135.222328064621 8178.698020483021 1.109735101543391 1.1039343292779769 1.0988497615404658 1.0082297563501408 0.9886163842584069 0.8293990828500798 0.9539573754805235 0.9391204899823866 1.0630396022475268 0.9946842770928188 1.0 12.99765548126505 -6.264676409889756 4.272181969991374 0.9997572637250526 1.1057724526301476 0.4512229690996463 0.0595225565716195 0.20059511378560912 9.235572604612322 0.010030291455655148 0.02604583427775136 5.436552547609354e-07 6.264676409889756 0.10601518890509498 QQDLHLES(ph)PQRQPEYSPESPR ddPTM_A549_MK2206_60min_R1 4 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR 167.78 1.7164999999999998e-35 269476000.0 4683.25 5440.76 5958.34 4349.42 7072.9 5803.42 4980.43 5828.64 8298.99 7705.400000000001 7519.0 True False 5473.668105530564 5717.671444635104 6803.322206887108 5415.028095252884 6032.485779413975 6417.534052401578 5885.309663269873 6654.867569461372 6419.282015763798 5964.744788367288 5651.824786156947 0.9684780248208078 1.0116505130589746 1.2037390514211501 0.9581026128969795 1.0673518744228208 1.1354800078233296 1.0413114146221947 1.1774723777285496 1.135789281983155 1.0553661895140092 1.0 12.464501025623981 -5.535146058754932 24.99680265061295 1.0772530166292045 0.9792710667201501 0.21647215946199128 0.07071692340602616 236.3482288597554 481601.85488367605 0.010286644818727804 0.03989480712300708 2.916446011181695e-06 5.535146058754932 -0.0979819499090544 QQDLHLES(ph)PQRQPEYSPESPR ddPTM_A549_PD325901_60min_R1 4 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR 229.69 2.3197999999999996e-76 288793000.0 15458.900000000001 16012.3 15215.7 13874.4 19098.7 15279.9 15806.900000000001 17930.1 17911.8 19067.399999999998 18070.1 True False 17028.276147759316 17361.71271617173 16248.328901437038 14731.390176951389 17757.27319893814 15155.465560434694 16408.440229367574 17572.470089608647 17159.02933596237 17863.481109937165 15847.592255801721 1.0745024148084925 1.0955426184577468 1.0252869104130697 0.9295664564791098 1.1205029074645263 0.9563260661812116 1.0353901062390427 1.108841633856112 1.082753080656813 1.1272047401016037 1.0 13.951976046130001 -8.021235499329674 24.538858778977225 1.0466740944358608 1.0319915462838043 0.021667830046898096 0.06308107482028251 3342.5686069103854 3862530.6297030332 0.009849772150234835 0.012785119152033373 9.522796434559957e-09 8.021235499329674 -0.014682548152056496 QQDPGCPGVT(ph)PSR ddPTM_A549_MK2206_60min_R1 2 QQDPGCPGVTPSR 13 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 QQDPGCPGVT(0.86)PS(0.14)R;QQDPGCPGVT(0.987)PS(0.013)R 68.03399999999999 0.0043032 3668100.0 1674.0700000000002 1948.88 1722.38 1470.8 1986.13 1141.8400000000001 1283.7800000000002 1313.4299999999998 1826.53 2210.1 2534.4 True False 1956.612088918071 2048.0696676604857 1966.6393832339586 1831.146066026721 1693.9729080105028 1262.6687509079516 1517.0262084825188 1499.612724710678 1412.8238713690512 1710.8368750188868 1905.0385341183876 1.0270721845653115 1.0750804411461892 1.0323357496514256 0.9612120874364032 0.8892066368591534 0.6628048348073382 0.7963231091199775 0.7871823576548639 0.7416248259896101 0.8980589339158048 1.0 10.895604464752992 -6.590072440173732 2.3676497652196713 0.8456742535110566 1.047032421561106 0.5680978551920208 0.08474853122753506 0.2485797488143862 2.801801519674066 0.017017065791736456 0.04136178215197663 2.569967077370467e-07 6.590072440173732 0.20135816805004936 QQDPGCPGVT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 QQDPGCPGVTPSR 13 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 QQDPGCPGVT(0.995)PS(0.005)R;QQDPGCPGVT(0.99)PS(0.01)R 85.90899999999999 0.00027938 4545600.0 2031.8 2029.29 2177.72 1639.6 2108.72 1540.63 1855.6599999999999 2103.3599999999997 1752.6599999999999 2480.4 2231.2 True False 2238.066840267896 2200.305390093873 2325.513174894184 1740.8743681982264 1960.6107818890719 1528.0836200742483 1926.2781567561144 2061.4068347460016 1679.0017952393298 2323.7871206922887 1956.7765447421332 1.1437518741123462 1.1244540905838751 1.188440847342967 0.8896643681037384 1.0019594660193782 0.7809188147620716 0.9844139648607461 1.0534707400724985 0.8580447265431583 1.1875587567401675 1.0 10.934263300617225 -6.2603025601492845 24.999386202223643 0.9356580367837924 1.1494394610973357 0.34191210434148056 0.10553238211426366 52.40682462029198 1152438.3409644712 0.01091801540929318 0.02722818258009334 5.491581582768515e-07 6.2603025601492845 0.2137814243135433 QQDPS(ph)PGSNLGGGDDLK ddPTM_A549_MK2206_60min_R1 1 QQDPSPGSNLGGGDDLK 17 0 J3KTD8;Q13951-2 J3KTD8 CBFB 1 QQDPS(0.813)PGS(0.187)NLGGGDDLK 67.646 0.0019198 4564100.0 1419.0 1796.4 1454.2 1600.0 2071.7 1451.6 1455.2 1390.3 2041.2 2062.5 2541.5 True False 1658.492508780842 1887.829086955224 1660.4274266415212 1992.0000718267302 1766.9556743643952 1605.2073485059038 1719.5910035860989 1587.379282615181 1578.8714591265991 1596.5798175315404 1910.3754081683562 0.8681500513927698 0.988197963019871 0.8691628983192984 1.042727028053944 0.9249258898587529 0.8402575439583135 0.900132506016093 0.8309253122856832 0.826471829764811 0.8357413996772084 1.0 10.89964045500919 -7.001990320406668 24.998182999689732 0.901733604315591 0.9456079666511304 0.11933733137473479 0.06846423819131507 198.80531593663204 2497026.325565352 0.01168903068839388 0.021860791188885224 9.954276032816212e-08 7.001990320406668 0.04387436233553943 QQDS(ph)PKER ddPTM_A549_PD325901_60min_R1 1 QQDSPKER 8 1 Q9H609 Q9H609 ZNF576 Zinc finger protein 576 1 QQDS(1)PKER 47.938 0.030329000000000002 1424100.0 254.23 407.19 378.19 246.08 412.25 322.59 226.11 227.16 248.4 432.14 512.7 True False 280.0392424457657 441.505330333429 403.85624764121707 261.27980271177097 383.2949821852928 319.9629339943735 234.71473978213962 222.62911559642734 237.9606118342686 404.8546066505264 449.64115027307776 0.6228060805281972 0.9819059711623198 0.8981745718690239 0.5810851665891557 0.8524464052111526 0.711596200214443 0.5220045799624696 0.4951262033317444 0.5292233855592386 0.9003949180466436 1.0 8.812630263986208 -4.98785367784059 19.530162635787722 0.7472452246961478 0.4079877299744786 0.036916162463046964 0.18264802632028895 112859897.34976903 3031806969.4751954 0.029801694467345208 1072146929.4602085 1.028362714932866e-05 4.98785367784059 -0.3392574947216693 QQEGESR ddPTM_A549_MK2206_60min_R1 1 QQEGESR 7 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 A0A5F9ZHM4;P00338 LDHB;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A chain 0 71.877 0.055906 2325300.0 1121.0 1032.3 559.65 335.4 158.45 0.0 0.0 194.8 0.0 1305.4 1365.7 False True 1310.19739418134 1084.839660690201 639.0167853939812 417.5730150566779 135.14221489744577 0.0 0.0 222.41349654997995 0.0 1010.509233360326 1026.558998597492 1.2763001405387915 1.0567728325136045 0.6224842276644793 0.4067696212562313 0.13164583339299551 0.0 0.0 0.21665924399264558 0.0 0.9843654721656586 1.0 10.003600829340014 -5.7739059405793975 2.031127346226588 0.386266207745195 1.270345270124144 0.46370648273694204 0.34088520259325356 0.31743975975113786 2.418643392331476 0.06088389817289212 0.35491153309442214 1.683038533782579e-06 5.7739059405793975 0.884079062378949 QQEGESR ddPTM_A549_PD325901_60min_R1 2 QQEGESR 7 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;C9J7H8;P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 A0A5F9ZHM4;P00338 LDHB;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A chain 0 ; 95.741 0.032842 11104000.0 2696.8999999999996 3171.6 2580.8 2001.94 2722.2 1812.25 1295.4 1732.56 2158.08 3226.6 3623.8 False True 2970.687302647152 3438.8818627311666 2755.948607611132 2125.5952870643805 2531.0020630801782 1797.491636849573 1344.697155870079 1698.0027316329729 2067.383402525356 3022.8719253449976 3178.0955731608724 0.9347381896676455 1.0820574094034943 0.8671698330551207 0.6688267354245437 0.796389537323729 0.5655876594868487 0.4231141338939248 0.5342830926711786 0.6505101419807764 0.9511582819828504 1.0 11.633946795393822 -5.984005205003016 4.996094888188555 0.7501376668489994 1.0051532887194554 0.30762868384407605 0.17063153223337751 0.22579190934149398 15.791350858830599 0.02930275807429694 0.09122408980194716 1.0375159811535225e-06 5.984005205003016 0.255015621870456 QQELTHQEHR ddPTM_A549_MK2206_60min_R1 2 QQELTHQEHR 10 0 P18206;P18206-2;P18206-3 P18206 VCL Vinculin 0 ; 69.979 0.0032819000000000004 45058000.0 1827.91 1847.9900000000002 1449.45 1481.21 1947.69 1633.4 1156.23 1591.09 2259.02 2090.6099999999997 2377.52 False True 2136.416519891183 1942.044797596518 1655.0038052163056 1844.106516494043 1661.1873810893417 1806.2453038368308 1366.3020245164614 1816.631880008765 1747.355576913663 1618.339749008297 1787.1161677861223 1.1954547546496506 1.0866919748156725 0.9260751119869967 1.0318895602508706 0.9295351981215743 1.0107039130390754 0.7645289372593137 1.0165158330245574 0.9777515353567 0.9055593464934597 1.0 10.80341770149351 -5.513793953476306 3.294641507076253 0.9732514741829494 1.1873611202350138 0.49679842153563547 0.074159102035601 0.15117842902158812 3.177847588937711 0.009290244368707824 0.05961047159829821 3.06341649523023e-06 5.513793953476306 0.2141096460520644 QQELTHQEHR ddPTM_A549_PD325901_60min_R1 2 QQELTHQEHR 10 0 P18206;P18206-2;P18206-3 P18206 VCL Vinculin 0 ; 82.029 0.0010576 37837000.0 1994.48 1820.9 1805.88 2037.4 2201.12 1403.1 2020.9 1547.17 2057.46 2382.2 2002.05 False True 2196.958141341427 1974.3536334491055 1928.4378764386202 2163.245570728879 2046.5209246517682 1391.6736187963215 2097.806455378913 1516.3104806186154 1970.992111209882 2231.787485451204 1755.8105420406002 1.2512501142567043 1.1244684925712514 1.098317745716114 1.2320495400459086 1.1655704733799495 0.7926103560005515 1.19477950789659 0.863595726482176 1.1225539794966706 1.2710867328871507 1.0 10.777921466207012 -7.054622273641406 24.996999802628498 1.035509684246863 1.1711676128391089 0.19836079463367007 0.13343820131820736 312.2579460833875 142899.2485553614 0.015786690755611725 0.027343475799816268 8.818154960306213e-08 7.054622273641406 0.1356579285922459 QQEQADS(ph)LERSLEAER ddPTM_A549_PD325901_60min_R1 1 QQEQADSLERSLEAER 16 1 A0A087WY61;Q14980-2;Q14980;Q14980-4;Q14980-3 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QQEQADS(0.57)LERS(0.43)LEAER 44.729 0.013838 2078600.0 486.28 635.92 517.31 551.86 679.89 361.43 480.91 704.26 621.2 603.11 684.78 True False 535.6467876195843 689.5112101614343 552.4177674377381 585.9471388350051 632.1368718931683 358.48663391173454 499.2112932140496 690.2129818187184 595.0931242811907 565.0295316726036 600.5564011780735 0.8919175394165142 1.148120657458423 0.9198432759256168 0.9756737879832597 1.0525853536040002 0.5969241743298613 0.8312479764344837 1.149289193262733 0.9909029744980391 0.9408434088192564 1.0 9.230155932589689 -6.972188127753123 0.006892092051404566 1.9187734246046377 3.5117501980187516e-06 0.0 0.14797346352674326 27609.379977610475 54.28758133917795 7360.369532451986 7754.10919979202 1.066134193008188e-07 6.972188127753123 -1.9187699128544398 QQFHDAK ddPTM_A549_MK2206_60min_R1 2 QQFHDAK 7 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 ; 64.836 0.027384 2894700.0 1746.48 2158.7 1801.74 1707.97 2188.3999999999996 1450.81 1743.31 1795.4099999999999 2608.6 2688.9 2909.7 False True 2041.243126663541 2268.568609446806 2057.2538245613346 2126.422726673686 1866.489258955949 1604.333751230264 2060.0468612298523 2049.9148657125215 2017.7562650782133 2081.475622477846 2187.1411863653234 0.9332928022153698 1.037230071652028 0.9406131791519866 0.9722384361511927 0.8533922138139394 0.7335300351123689 0.9418902053841886 0.9372576761352797 0.922554189760104 0.9516878176195491 1.0 11.094830638241781 -5.958745560875461 24.580030112567187 0.9362038257904829 0.9861766342018337 0.0681313349867857 0.07333952099564045 302.73791403143395 180372.1102307324 0.01124838690071859 0.03497260880238677 1.099649900143455e-06 5.958745560875461 0.049972808411350766 QQFILT(ph)SPDGAGTGK ddPTM_A549_PD325901_60min_R1 1 QQFILTSPDGAGTGK 15 0 P49116;P49116-2;C9JKS0;C9JMI6 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 QQFILT(0.5)S(0.5)PDGAGTGK 173.44 2.5427999999999998e-27 3896400.0 3518.3 3629.8 3528.3 2465.5 4034.7 3347.6 3213.4 3383.7 4030.8 4157.5 3857.3 True False 3875.475225964432 3935.695984784206 3767.7516553914866 2617.788335443236 3751.316590959368 3320.3382554932414 3335.687695439952 3316.2094490387008 3861.399493484581 3894.9947404766094 3382.8765534393265 1.1456153261118225 1.1634169685508728 1.1137715479333299 0.7738350170601894 1.1089132375065396 0.981513278135289 0.9860506710032331 0.9802927764736653 1.1414544493380188 1.1513854197595887 1.0 11.724034816511589 -6.0136404130660654 24.591388589877152 1.0341788234026628 1.1505357433538523 0.23208781630025854 0.09906911705982038 620.7651227242449 1119143.5932019593 0.013743614389010572 0.038226355764546145 9.690799024829156e-07 6.0136404130660654 0.11635691995118957 QQFILTS(ph)PDGAGTGK ddPTM_A549_MK2206_60min_R1 2 QQFILTSPDGAGTGK 15 0 P49116;P49116-2;C9JKS0;C9JMI6 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 QQFILT(0.041)S(0.957)PDGAGT(0.002)GK;QQFILT(0.149)S(0.851)PDGAGTGK 110.77 2.5745e-06 5112600.0 3621.8 4565.0 4299.4 3558.3999999999996 5113.8 4583.799999999999 3971.5 4143.6 6273.9 5341.9 5318.6 True False 4233.071295491507 4797.339001308502 4909.119569593285 4430.208159742646 4361.566794209898 5068.854673519813 4693.070142071323 4730.967989242798 4852.871667359578 4135.161079889321 3997.844834107507 1.0588383169294546 1.1999812900140925 1.2279414968062947 1.1081491012223492 1.0909795090092809 1.2678968003647901 1.1739000228404364 1.183379592144415 1.2138719406910026 1.0343475676220106 1.0 11.96500676339601 -10.812417097584337 1.0029067428336904 0.9976310626023983 1.1736774285324845 0.4858818978472015 0.059955327309747355 0.3396500347897209 0.593119334256677 0.04332654062747009 0.01019657559087141 1.54022051048687e-11 10.812417097584337 0.17604636593008616 QQFILTS(ph)PDGAGTGK ddPTM_A549_PD325901_60min_R1 1 QQFILTSPDGAGTGK 15 0 P49116;P49116-2;C9JKS0;C9JMI6 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 QQFILT(0.023)S(0.977)PDGAGTGK 167.37 1.1555e-21 3358300.0 3124.1 3182.3 3606.7 3229.0 3116.3 3661.0 2991.0 2708.3 3904.9 2878.2 3248.2 True False 3441.2563321591347 3450.4835892828223 3851.472350848987 3428.447996408925 2897.421838651372 3631.186029800682 3104.824141738001 2654.280831879752 3740.7906326555367 2696.4699608033134 2848.6919920363007 1.2080127798229452 1.2112519004963922 1.352014314505051 1.2035165633888707 1.0171060426158036 1.2746853783953804 1.0899121949363897 0.9317542364355159 1.3131607920804196 0.9465642366185837 1.0 11.476083926828 -11.097456479680385 1.4202470437926984 0.9996338019728168 1.1912594446469 0.2862023875021916 0.12077880616700892 0.4997463987622382 1.7958401590577964 0.09075713214400649 0.019638569876971632 7.989940042371122e-12 11.097456479680385 0.19162564267408322 QQFSPS(ph)MTER ddPTM_A549_MK2206_60min_R1 1 QQFSPSMTER 10 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 QQFS(0.122)PS(0.825)MT(0.054)ER 44.753 0.018923 9179000.0 2106.3 2703.3 2423.2 2562.2 3400.4 2422.7 2237.1 2638.1 3843.9 3313.3 3067.3 True False 2461.7919459091527 2840.88642327213 2766.8461973853214 3189.9391150215283 2900.2056644826416 2679.068505941895 2643.5521125085634 3012.0587538424147 2973.262787446962 2564.8232288132112 2305.604756826599 1.067742395404114 1.2321654068680379 1.2000522592578133 1.3835585243205841 1.2578936853315843 1.16198082000374 1.1465764479715552 1.3064072430125313 1.2895804359543905 1.112429709046661 1.0 11.170929501798083 -10.819091217484937 1.0193087279742479 0.9973835958765107 1.2334188042070764 0.3398698481702874 0.0872083419072311 0.35223321800864893 0.6380714034275119 0.060786585047635316 0.014406708079522434 1.5167317656965386e-11 10.819091217484937 0.23603520833056568 QQFYHS(ph)VQDLSGGSR ddPTM_A549_PD325901_60min_R1 1 QQFYHSVQDLSGGSR 15 0 P10398;P10398-2 P10398 ARAF Serine/threonine-protein kinase A-Raf 1 QQFY(0.006)HS(0.994)VQDLSGGSR 67.866 0.00086974 6445000.0 2090.8 2842.2 2370.1 2565.3 2656.2 2372.0 2761.2 2523.5 3229.2 3239.8 3362.6 True False 2303.0564768343897 3081.722168701769 2530.9492385691033 2723.75275478099 2469.6376753925388 2352.6832184340938 2866.2789769866167 2473.1668128525457 3093.487953845493 3035.238475092272 2949.02151727765 0.7809561453998564 1.0449981970788127 0.8582335611119973 0.9236123706874089 0.8374430844005343 0.7977843514027466 0.9719423748500092 0.8386397991207662 1.0489879221706069 1.0292357845846483 1.0 11.526020633598362 -8.767082761919712 24.999115934983944 1.0231331924752594 0.8864947841663428 0.43188484151600703 0.07357496040513102 89.87599659316612 398132.69968660246 0.01187623742300053 0.012815086587269963 1.7096894747397995e-09 8.767082761919712 -0.1366384083089166 QQGHEPVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 QQGHEPVSPR 10 0 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 QQGHEPVS(1)PR;QQGHEPVS(1)PR 113.37 3.3642e-05 467800000.0 2314.8 2450.3 2308.44 1938.94 2869.5 2692.8999999999996 1782.99 2750.8 3180.1 3371.0 3515.7 True False 2705.481648573567 2575.0098039225036 2635.811503752134 2413.9803870423234 2447.4003512036634 2977.8608905976516 2106.9362036036127 3140.734323971687 2459.8124275761807 2609.488758738821 2642.6546616161677 1.023774194891956 0.974402687314318 0.9974104986310058 0.9134679691995797 0.9261143299393146 1.1268445074758584 0.7972801873079679 1.1884770150220494 0.9308111511141731 0.9874497779225291 1.0 11.367772192605786 -5.259822466786503 20.133745442315593 0.9761904156734009 1.0237743951689111 0.007043927985714515 0.09973568753877833 37.20646693236586 462469.9413095317 0.011846576217889726 0.1020265311613605 5.4976556402748714e-06 5.259822466786503 0.04758397949551019 QQGHEPVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QQGHEPVSPR 10 0 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 QQGHEPVS(1)PR;QQGHEPVS(1)PR 115.24 2.7598000000000002e-05 511210000.0 3560.4 3689.1000000000004 3819.7 3434.3 3863.6 2915.5 3595.0 4142.8 3162.3 4304.1 3436.7 True False 3921.8491869720497 3999.993403897578 4078.927811722037 3646.4289111387957 3592.2340646964144 2891.757134630945 3731.8096922594846 4060.168604036274 3029.3995281944776 4032.3383914576966 3014.007687036251 1.3012074268558027 1.3271344400023317 1.3533236259702273 1.2098273427843909 1.191846351337195 0.9594392035126103 1.2381553332828645 1.3470996180599457 1.005106769045225 1.33786599443706 1.0 11.557467381105102 -6.880228180387584 0.24511338104206146 0.9560259070725279 1.4720129625066016 0.0 0.1518805260897667 2.644162135496339 0.25301972488377644 0.09710944357968412 0.4142360300462069 1.3175643021130635e-07 6.880228180387584 0.5159870554340737 QQGKDS(ph)LGTVER ddPTM_A549_PD325901_60min_R1 1 QQGKDSLGTVER 12 1 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 QQGKDS(0.595)LGT(0.405)VER 48.883 0.0090256 29138000.0 8059.7 8072.5 8448.3 6871.1 9341.1 8098.1 9184.9 8958.4 8085.1 9271.2 8230.5 True False 8877.914810762455 8752.797905441217 9021.65244175493 7295.512241599682 8685.013361045567 8032.151758516502 9534.436395670138 8779.717684271152 7745.311363692615 8685.814849767112 7218.200677438208 1.2299346066273806 1.2126010756114984 1.2498478284143217 1.0107106421137786 1.203210294248558 1.1127637090532057 1.32088824095342 1.2163305062595098 1.0730252191383354 1.2033213314387612 1.0 12.817423537667304 -8.92809530607722 3.1007578216179255 1.0295481948192517 1.192455117303628 0.11496731804094129 0.09223477162083207 0.15588729005028035 2.886840591434404 0.01412644093325664 0.014622434910852708 1.1800616422910951e-09 8.92809530607722 0.16290692248437622 QQGKDSLGT(ph)VER ddPTM_A549_PD325901_60min_R1 1 QQGKDSLGTVER 12 1 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 QQGKDS(0.275)LGT(0.725)VER 66.738 0.0020406 29543000.0 8239.9 7801.0 9305.1 7862.7 10454.0 8008.5 9382.2 9179.0 9130.2 10083.0 10229.0 True False 9076.408582106222 8458.41764761188 9936.600042111879 8348.361121512688 9719.74710434215 7943.281431209713 9739.244755136839 8995.917644213803 8746.48944512576 9446.357659224457 8970.897846973505 1.0117614465054146 0.9428730314285632 1.1076483325985227 0.9306048585013326 1.0834753967933415 0.8854499924875996 1.0856488303924394 1.0027889958917255 0.9749848448086551 1.053000248175979 1.0 13.131036668307555 -8.552199496657968 20.414142897770947 0.9882240542454842 1.0064597932651698 0.0 0.06837068681159637 114.26262020752928 79551.34821611116 0.009790836587468614 0.011102152243983657 2.8041452354220946e-09 8.552199496657968 0.01823573901968556 QQGPSS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 QQGPSSPQR 9 0 O60336-3;O60336-6;O60336;O60336-4;O60336-2 O60336-3 MAPKBP1 Mitogen-activated protein kinase-binding protein 1 1 QQGPS(0.261)S(0.739)PQR;QQGPS(0.409)S(0.591)PQR 94.66 0.00094183 19632800.0 1806.77 2227.07 2466.3 1903.5900000000001 2538.65 2194.16 1830.52 2214.0 2620.62 2864.8999999999996 3036.5 True False 2111.7086047145594 2340.418350414924 2816.0584254751634 2369.969635455401 2165.217947929321 2426.344554834469 2163.101789365329 2527.841280090634 2027.0537542702093 2217.717100240538 2282.4532468633556 0.9251924908501672 1.0253959653417772 1.2337858089076352 1.0383431243169228 0.9486362758601323 1.0630423900988355 0.9477091337305399 1.107510650465459 0.8881030781488615 0.9716374709047028 1.0 11.156369593410819 -8.765663052573798 24.992340494146397 0.9471597903095231 1.0375253393900314 0.1574400839114457 0.0851100233544222 136.98392938089015 810560.2147833208 0.015341169812230129 0.01661222991925653 1.7152875974784105e-09 8.765663052573798 0.09036554908050831 QQGPSS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 QQGPSSPQR 9 0 O60336-3;O60336-6;O60336;O60336-4;O60336-2 O60336-3 MAPKBP1 Mitogen-activated protein kinase-binding protein 1 1 QQGPS(0.027)S(0.973)PQR;QQGPS(0.022)S(0.978)PQR 123.96 9.3543e-05 20450600.0 2914.5 2744.5 2454.2 1935.81 2909.6000000000004 2255.46 2340.5 2757.38 2611.8 3602.6000000000004 2901.6 True False 3210.3778944584997 2975.788646823589 2620.7567703034874 2055.380587156509 2705.2397335750807 2237.0922815553786 2429.569008270742 2702.381892777235 2502.0351287791586 3375.131221176436 2544.7215947578766 1.2615831535645685 1.1693965473290713 1.0298795654904815 0.8077035190767393 1.063078860629733 0.8791108175306037 0.9547484539273967 1.0619558140836067 0.9832254868011291 1.326326317240048 1.0 11.313292111559193 -5.70358097310643 2.930976485345656 0.9797515759944884 1.2435945494555845 0.26715472628895587 0.12645561307019412 0.11432608727348986 1.9047478052272933 0.009193721018065312 0.0450637256837521 1.9788780300421276e-06 5.70358097310643 0.2638429734610961 QQKPTLS(ph)GQR ddPTM_A549_PD325901_60min_R1 1 QQKPTLSGQR 10 1 Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;C9JV57;C9J188;C9JWF5;C9JFN4;C9IZ80 Q7L1Q6-2 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 QQKPT(0.007)LS(0.993)GQR 60.401 0.0022384 22690000.0 7779.5 7388.4 6456.5 6247.5 8166.3 7207.0 7006.4 7814.0 8075.7 7222.4 7744.9 True False 8569.26911303479 8011.046397592058 6894.676916088526 6633.393885898039 7592.727260205591 7148.308581473236 7273.032386049187 7658.143640035586 7736.306413003235 6766.376431417507 6792.326398966181 1.2616103246067603 1.1794260062077364 1.0150685510546023 0.9766011667089008 1.1178389868545238 1.0524094635029961 1.0707719209660143 1.1274699109278945 1.1389774222541384 0.9961795169983846 1.0 12.729690072595366 QQLPQT(ph)PPSCLK ddPTM_A549_MK2206_60min_R1 2 QQLPQTPPSCLK 12 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 QQLPQT(0.996)PPS(0.004)CLK;QQLPQT(0.987)PPS(0.013)CLK 128.9 8.8521e-08 26532000.0 9121.3 10010.400000000001 10998.099999999999 8351.5 12988.6 10096.4 10070.6 9133.4 15712.7 14104.2 17143.1 True False 10660.752445625565 10519.886602124567 12557.795957190281 10397.61787491308 11077.994145894374 11164.794346552093 11900.297664042168 10428.087419864412 12153.798538025932 10918.051424207677 12885.995144509518 0.8273130888279058 0.8163813880223985 0.9745305516850923 0.8068928909493894 0.8596925593763319 0.8664285700363005 0.9235062973861714 0.8092574382435358 0.9431788854277536 0.8472804235736233 1.0 13.653516335808723 -8.989094303864977 3.234701043333822 0.9773368737574386 0.8633282984708585 0.08766847973560543 0.0631333751500155 0.13324117973231103 2.8139263782572854 0.008933777638349936 0.009081703042124564 1.0254292376283236e-09 8.989094303864977 -0.11400857528658015 QQLPQT(ph)PPSCLK ddPTM_A549_PD325901_60min_R1 2 QQLPQTPPSCLK 12 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 QQLPQT(0.974)PPS(0.026)CLK;QQLPQT(0.986)PPS(0.014)CLK 125.54 3.8493e-06 78055000.0 7276.700000000001 7838.5 8511.0 7492.200000000001 8829.5 9381.2 8400.1 9224.4 8454.2 8957.0 8748.0 True False 8015.425227176584 8499.077904218138 9088.607640800657 7954.97617797924 8209.346380121386 9304.80261752695 8719.770402211094 9040.412105598194 8098.899374272439 8391.45349138882 7672.051458140985 1.044756447595413 1.107797301750313 1.1846385142733282 1.0368773230187391 1.0700327578499573 1.2128180667575446 1.1365630757023077 1.1783565523410575 1.0556367378999414 1.0937691877033047 1.0 12.905396681524367 -9.045554131720653 2.893632389236613 1.0214318963318645 1.1220367973483734 0.19125107068574076 0.058989579835594046 0.1825122116723291 3.1459233222918104 0.010582360748125293 0.010522064459571108 9.004215246121726e-10 9.045554131720653 0.10060490101650887 QQLS(ph)AEELDAQLDAYNAR ddPTM_A549_MK2206_60min_R1 2 QQLSAEELDAQLDAYNAR 18 0 Q86V81;E9PB61 Q86V81 ALYREF THO complex subunit 4 1 QQLS(1)AEELDAQLDAYNAR;QQLS(1)AEELDAQLDAYNAR 102.89 6.7043e-09 12602500.0 2430.3 2597.0 1992.25 2064.1400000000003 3314.2 2084.92 2043.13 2370.0 3143.7 3191.9 3163.8999999999996 True False 2840.4752248696805 2729.176207316143 2274.7810072387365 2569.854392662767 2826.6855702941925 2305.5448505421136 2414.3402742969124 2705.9547578205984 2431.656969457324 2470.8475731291746 2378.2163108022296 1.19437210651016 1.1475727396703987 0.9565071927672543 1.0805805935272108 1.1885737884543746 0.9694428719834983 1.0151895196961698 1.1378085103233586 1.0224708990567253 1.0389498894218323 1.0 11.215664226124563 -2.0000000000000004 0.23385438494672814 1.0062595944198607 1.8880656459446161 0.22568172654511232 0.0723413511671983 43.87225013305327 0.5215111108496003 0.0387373909280886 15.116079790742377 0.00999999999999999 2.0000000000000004 0.8818060515247554 QQLS(ph)EEEK ddPTM_A549_MK2206_60min_R1 2 QQLSEEEK 8 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 QQLS(1)EEEK;QQLS(1)EEEK 100.88 0.0023393 20614000.0 7986.200000000001 7842.5 6696.5 6368.4 8274.3 6431.200000000001 5585.5 7444.4 9029.9 7856.5 7903.2 True False 9334.075316156133 8241.649751974142 7646.164394515848 7928.658285888338 7057.161430898931 7111.745315314946 6600.313050116933 8499.66649751884 6984.642067787224 6081.711193423779 5940.617322776378 1.571229858615738 1.3873389420953923 1.2870992994617558 1.334652251625398 1.1879508555182832 1.1971391067471142 1.111048345903594 1.430771590846467 1.1757434771985809 1.023750708551188 1.0 12.536397141989887 -2.0000000000000817 0.08813628677826083 0.8178400186647201 2.5834347038181256 0.6522916134905321 0.09871129777597541 61.887141204535794 0.38162836697062535 1.005943153720945 13.253329476460685 0.009999999999998118 2.0000000000000817 1.7655946851534055 QQLS(ph)PSPGQEAGILPETEK ddPTM_A549_MK2206_60min_R1 3 QQLSPSPGQEAGILPETEK 19 0 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 QQLS(0.971)PS(0.029)PGQEAGILPETEK;QQLS(0.997)PS(0.003)PGQEAGILPETEK;QQLS(0.733)PS(0.267)PGQEAGILPETEK 221.91 1.3053999999999997e-74 22652800.0 5994.8 6600.0 6173.0 5195.6 8072.8 6522.3 5942.8 6620.7 8357.0 8495.5 9691.9 True False 7006.575681211691 6935.911809120728 7048.424222705345 6468.52223323935 6885.301813973499 7212.4854568476585 7022.5298351508145 7559.204500043386 6464.152843386726 6576.360649619003 7285.133747167773 0.9617634932146061 0.9520637574865648 0.9675078683964513 0.8879071349587925 0.94511673401333 0.9900278714377264 0.9639534535492844 1.0376205519881037 0.8873073669923742 0.9027096657183105 1.0 12.830739743513911 -5.256476026582474 20.15119781981273 0.9530665374784377 0.9617635111564966 0.0027832642801811636 0.04493974172860323 417.8082995351105 1695242.017822556 0.006742129631142364 0.07082893563221682 5.540181253569993e-06 5.256476026582474 0.008696973678058884 QQLS(ph)PSPGQEAGILPETEK ddPTM_A549_PD325901_60min_R1 2 QQLSPSPGQEAGILPETEK 19 0 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 QQLS(0.963)PS(0.037)PGQEAGILPETEK;QQLS(0.981)PS(0.019)PGQEAGILPETEK 184.35 2.0457e-43 29098000.0 5696.5 5529.3 6046.200000000001 4577.4 6344.8 5898.4 6258.1 6241.1 6493.3 7049.3 7464.799999999999 True False 6274.8044864583435 5995.273516080036 6456.531490754191 4860.135601970335 5899.163136371725 5850.365386008287 6496.255420063723 6116.616364451762 6220.4091820590065 6604.205994958939 6546.676923265987 0.9584716887675568 0.9157735422644212 0.9862303526554927 0.7423820755073591 0.9010927537002648 0.893638933856182 0.9922981531251263 0.9343085715310238 0.950162846734124 1.0087875226419838 1.0 12.67654706873549 -7.754166621428171 24.941476976901676 0.9731150002589195 0.8971930236831371 0.28702936211533636 0.060616750078777204 168.19709791121403 576819.0694532138 0.009160702406046484 0.013433808954004374 1.761300176312731e-08 7.754166621428171 -0.07592197657578237 QQLS(ph)SEQVSR ddPTM_A549_MK2206_60min_R1 3 QQLSSEQVSR 10 0 Q9NW13-2;Q9NW13 Q9NW13-2 RBM28 RNA-binding protein 28 1 QQLS(0.5)S(0.5)EQVSR;QQLS(0.5)S(0.5)EQVSR;QQLS(0.5)S(0.5)EQVSR 164.04 4.7396000000000005e-09 12608200.0 2441.3 2853.4 2745.57 2510.76 3929.0 3082.8 2465.78 2840.5 4718.7 4107.0 4346.0 True False 2853.3317559455036 2998.625872143195 3134.9331108266797 3125.8963127123 3351.0493047148275 3409.019849802979 2913.780308426697 3243.1495736664156 3649.921984215501 3179.225847564623 3266.7682565019386 0.8734417417784194 0.9179181492825356 0.9596435573864587 0.9568772766451195 1.025799518544097 1.0435450519080787 0.8919458252440527 0.9927700158134836 1.1172883099224933 0.9732021367713863 1.0 11.673648398742028 -5.3413785419348665 0.39388569883529206 1.0479085578202423 0.7587713534711624 0.28136537664987316 0.05682979129672587 3.750795103514117 0.4039928137802366 0.016350625640513775 0.503702692609889 4.556395959491795e-06 5.3413785419348665 -0.28913720434907986 QQLS(ph)SEQVSR ddPTM_A549_PD325901_60min_R1 1 QQLSSEQVSR 10 0 Q9NW13-2;Q9NW13 Q9NW13-2 RBM28 RNA-binding protein 28 1 QQLS(0.5)S(0.5)EQVSR 121.68 4.5832e-12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QQLSPS(ph)PGQEAGILPETEK ddPTM_A549_MK2206_60min_R1 1 QQLSPSPGQEAGILPETEK 19 0 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 QQLS(0.001)PS(0.999)PGQEAGILPETEK 135.04 9.200799999999999e-17 4848500.0 726.92 1062.5 660.01 844.46 1662.1 503.23 877.83 601.76 1459.0 1198.4 1100.1 True False 849.6063245123108 1116.5767116955717 753.6093424959907 1051.3527379092502 1417.607291770557 556.4814645829612 1037.3203481844323 687.0613228127103 1128.538829544243 927.6806076750529 826.9148087845795 1.0274411771160368 1.3502923152830517 0.9113506427629045 1.2714160234408614 1.714332935764196 0.6729610579847903 1.2544464522398775 0.8308731631285823 1.3647582768568365 1.1218575333516903 1.0 9.691594896106205 -7.2678832156317705 24.99816212041685 1.1234544048536992 1.2420865660845732 0.09756370297656747 0.2646133285882968 1536.2707858217625 5959788.849408108 0.04007665508632623 0.06502555171699463 5.3965571963698257e-08 7.2678832156317705 0.11863216123087406 QQLSPS(ph)PGQEAGILPETEK ddPTM_A549_PD325901_60min_R1 2 QQLSPSPGQEAGILPETEK 19 0 E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0 E5RJM0 CPEB4 Cytoplasmic polyadenylation element-binding protein 4 1 QQLS(0.001)PS(0.999)PGQEAGILPETEK;QQLS(0.394)PS(0.606)PGQEAGILPETEK 189.11 1.0696e-43 16230700.0 4957.6 6324.9 5486.0 5461.5 7053.6 5249.299999999999 6024.799999999999 6380.6 6531.3 6520.8 5969.5 True False 5460.891902407773 6857.921520238477 5858.312949997929 5798.8444510335585 6558.179469598982 5206.551441199869 6254.077060897061 6253.333927516132 6256.812174207564 6109.07557515331 5235.2893437783105 1.043092662853023 1.3099412601499332 1.1190046175690418 1.1076454557234712 1.2526871083816622 0.9945107327042786 1.1946000784712103 1.1944581315162035 1.195122516321518 1.1669031402081758 1.0 12.354053558837938 -10.795609699114971 0.9887452839776447 0.9978274511257732 1.1607408759704185 0.0 0.09810443457267555 0.4983226627310393 0.8463560868524719 0.05809396588083762 0.013796930825715866 1.60099619915984e-11 10.795609699114971 0.16291342484464533 QQLSS(ph)EQVSR ddPTM_A549_MK2206_60min_R1 1 QQLSSEQVSR 10 0 Q9NW13-2;Q9NW13 Q9NW13-2 RBM28 RNA-binding protein 28 1 QQLS(0.076)S(0.924)EQVSR 189.57 2.3530000000000002e-14 11084000.0 1121.7 2174.1 1847.4 1484.0 2712.7 1834.9 1351.1 1803.5 2786.6 2929.2 2511.9 True False 1311.0155370679838 2284.752403668088 2109.3890991456105 1847.5800666192904 2313.6654234919592 2029.0679000919577 1596.5773810783246 2059.151647987109 2155.439549285804 2267.491685582247 1888.1259050867975 0.6943475186352661 1.2100635860737567 1.1171866735489981 0.9785258820091008 1.2253766643732371 1.0746465024527487 0.8455884095319002 1.0905796284239049 1.1415761753381155 1.200921866213159 1.0 10.882739255181763 -5.247524368638261 24.344096571600986 1.0704090134494806 0.6943471513242983 0.5106752127039067 0.10961667317884952 1014.4419742230149 1774707.6766687622 0.014038062647555574 0.3866185079318487 5.655560223622306e-06 5.247524368638261 -0.37606186212518233 QQNAS(ph)ESKLELR ddPTM_A549_MK2206_60min_R1 2 QQNASESKLELR 12 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 QQNAS(0.992)ES(0.008)KLELR;QQNAS(0.939)ES(0.061)KLELR 47.548 0.009815 24729500.0 4234.0 5308.0 5042.5 4222.1 5031.7 4455.7 4177.8 5168.2 6237.0 6470.700000000001 5762.0 True False 4948.595688638532 5578.154527698913 5757.602323504242 5256.5146895372745 4291.5435954526865 4927.199216545713 4936.852181680872 5900.808176948701 4824.329458442388 5008.964375903676 4331.136376890053 1.142562888354913 1.2879193916549618 1.3293514270816968 1.2136571634143933 0.9908585696703931 1.1376227363414633 1.1398514736277479 1.3624156949742001 1.1138715197664752 1.1565011904567026 1.0 12.080529884720615 -13.172178009126519 0.13744704438872976 0.5765629914081101 1.279115954122422 0.025152637172838 0.11346056384258266 33.980822453954076 0.5130223068184611 4.392017229374721 0.3172707394895917 6.727008723542002e-14 13.172178009126519 0.7025529627143119 QQNAS(ph)ESKLELR ddPTM_A549_PD325901_60min_R1 1 QQNASESKLELR 12 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 QQNAS(0.792)ES(0.208)KLELR 87.38799999999999 7.8231e-05 20801000.0 4167.3 4351.8 4643.6 4482.6 5618.4 4276.5 4751.3 4657.1 5161.3 4468.5 5488.3 True False 4590.361228195887 4718.541458643429 4958.7426202352135 4759.480021276758 5223.78296642777 4241.6736018690535 4932.113321511123 4564.210487075725 4944.388509904228 4186.358147401018 4813.273893200184 0.9536879325900796 0.9803185032352749 1.0302224079208409 0.9888238498126146 1.0852868717501243 0.8812450103579931 1.0246899368180202 0.9482548860399745 1.0272402152076308 0.8697527380096064 1.0 12.232802805018443 QQNIS(ph)MQR ddPTM_A549_PD325901_60min_R1 2 QQNISMQR 8 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 QQNIS(1)MQR;QQNIS(1)MQR 51.43600000000001 0.010368 20941100.0 3042.5 2699.1 3421.9 2780.5 3739.7 3316.6 3670.0 3321.5 3778.5 3487.3 3637.6 True False 3351.37236022988 2926.5626294922745 3654.13071155631 2952.245170026331 3477.0363732646165 3289.5907092152247 3809.6638583010576 3255.2500768336586 3619.7027850876993 3267.11128285366 3190.19826064628 1.0505216561527901 0.9173607376048794 1.1454243319711563 0.9254111904092933 1.0899123155312072 1.0311555710486813 1.1941777742456936 1.020391151543729 1.1346325492492775 1.0241091668678295 1.0 11.639430370333452 QQNS(ph)PLAK ddPTM_A549_PD325901_60min_R1 1 QQNSPLAK 8 0 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 QQNS(1)PLAK 72.321 0.005710600000000001 9562400.0 6521.6 7470.2 6852.1 6129.5 7794.9 6802.8 6358.7 7104.4 7179.5 7463.1 7735.6 True False 7183.66803105183 8099.739970669177 7317.124711024574 6508.105293895483 7247.413114945152 6747.400252261152 6600.68380811415 6962.697168706016 6877.770582383782 6991.878592339388 6784.170240008627 1.0588867579836403 1.1939175586871589 1.0785585343765296 0.9593074854629837 1.0682829083805445 0.9945800316845486 0.9729537400443767 1.0263152194566925 1.0137968740558958 1.0306166185373462 1.0 12.727956657590118 -6.025389772716799 6.801113082391147 1.006989359405913 1.1291395320619437 0.580981820318798 0.03990275993550986 0.07058907290081584 13.033281629650725 0.004719396025408527 0.013216211276525223 9.432139760513854e-07 6.025389772716799 0.12215017265603079 QQPGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 QQPGSPR 7 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 QQPGS(1)PR;QQPGS(1)PR 99.13600000000001 0.011426 111404000.0 3127.0 2727.8 2605.4 1805.8 3068.0 2433.4 2086.8 2691.7 2539.4 4046.5 4609.9 True False 3654.7611521900585 2866.6333686241705 2974.8848971061866 2248.2210810654424 2616.7012641550245 2690.90077283981 2465.9445480232766 3073.25671798553 1964.22995458852 3132.392839583695 3465.1346032324623 1.054724150911974 0.8272790805730958 0.8585192893606659 0.6488120487348982 0.7551514050028608 0.7765645727959873 0.7116446633048287 0.8869083224411058 0.5668553114087348 0.90397436124462 1.0 11.758695679634743 -5.0432349577040645 1.614295522897781 0.7810364154980814 1.287755165806116 0.2988509628092916 0.11616379503162896 2.337393972032594 3.7013226561564525 0.021908983166588895 2.183319717909547 9.052427229334125e-06 5.0432349577040645 0.5067187503080345 QQPGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QQPGSPR 7 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 QQPGS(1)PR;QQPGS(1)PR 115.7 0.0072236999999999996 145980000.0 5201.5 6304.1 4920.6 3698.6 5141.700000000001 3751.1 2804.3999999999996 4106.9 4721.6 5627.8 6540.4 True False 5729.55245085808 6835.3686312408745 5254.541505971536 3927.054121869947 4780.564729902048 3720.552285273243 2911.1229766265637 4024.984657699277 4523.1675718062925 5272.459747553643 5735.972263011585 0.9988807804746717 1.19166696033709 0.9160681511407308 0.6846361770599125 0.8334358171027985 0.6486349854348535 0.5075204068539416 0.7017092261157518 0.7885616185723102 0.9191919880005519 1.0 12.485822332392214 -5.9482006368928495 5.863441134356015 0.8209029080619772 1.090753866439574 0.4137424353458202 0.1422103379340244 0.18978465064892844 14.326699780695176 0.024006450191347464 0.07612582401195571 1.1266768297982346e-06 5.9482006368928495 0.26985095837759676 QQPGS(ph)PRR ddPTM_A549_MK2206_60min_R1 2 QQPGSPRR 8 1 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 QQPGS(1)PRR;QQPGS(1)PRR 43.512 0.028686 29433500.0 1037.19 965.54 560.5 473.56 674.71 615.4 772.83 546.9200000000001 918.38 1331.22 1620.96 True False 1212.2423151391117 1014.6818618452171 639.9873281753347 589.5822212589162 575.4610527829328 680.5212195305414 913.2432073264462 624.4475848722535 710.3683963515027 1030.4964774275563 1218.4308957798853 0.9949208603768929 0.8327775217779143 0.5252553348671414 0.48388646684926706 0.47229683257054594 0.5585226227335264 0.749524007056554 0.5125014369178165 0.5830190278430315 0.8457570150237883 1.0 10.250808714514653 -10.689878714113188 0.8847239259540978 1.0070352306646677 0.6247352288574353 0.3039224483871539 0.1619415259723924 0.4883608034401674 0.6606196540930562 0.12275063964153989 0.03005499450274042 2.0423082226474957e-11 10.689878714113188 -0.38230000180723245 QQPGS(ph)PRR ddPTM_A549_PD325901_60min_R1 3 QQPGSPRR 8 1 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 QQPGS(1)PRR;QQPGS(1)PRR;QQPGS(1)PRR 62.536 0.0082917 61578600.0 3720.23 3952.2 3728.31 3510.3599999999997 3871.64 3394.0499999999997 2807.8 3472.8900000000003 3982.8 4700.65 4413.5599999999995 True False 4097.905010911426 4285.265764247105 3981.3355367493214 3727.1869645940023 3599.709362832907 3366.40998209369 2914.652365487116 3403.620484520502 3815.416766560084 4403.850156782053 3870.720099861997 1.0586931902044607 1.1070978147967578 1.0285774827508887 0.962918234446063 0.9299844137428712 0.8697115511436005 0.7530000336606701 0.8793248792755259 0.9857123915253173 1.1377340761320003 1.0 11.918386271666918 -6.102465394782848 2.767656141838382 0.9526013698455832 1.082288552184877 0.27389703137311094 0.09128147197313033 0.28948821442082306 4.260370917828834 0.012524943034876012 0.04053652317288488 7.898317818398621e-07 6.102465394782848 0.12968718233929388 QQPPEPEWIGDGEST(ph)SPSDKVVKK ddPTM_A549_MK2206_60min_R1 1 QQPPEPEWIGDGESTSPSDKVVKK 24 2 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.081)T(0.478)S(0.376)PS(0.064)DKVVKK 94.19200000000001 5.8265e-08 11898000.0 1346.4 1441.3 1245.4 1141.2 2143.7 1580.4 1618.8 1568.9 2122.0 2141.7 2700.2 True False 1573.6394036804252 1514.656013709956 1422.0164469394517 1420.7940512304153 1828.3645697422185 1747.6368790153845 1912.9150059133976 1791.2963795547407 1641.3703881376866 1657.8884825247505 2029.6658182711772 0.7753194587574102 0.7462588176215655 0.7006160492719401 0.7000137847523171 0.900820496301986 0.8610466133306524 0.9424778151620915 0.8825572975754826 0.8086899692362993 0.8168283012899641 1.0 10.987026493840448 -6.768104706280642 24.659954766423624 0.9039078572488343 0.7295356499642414 0.6430033807121482 0.05539676207402781 71.57992164220863 264828.14789741195 0.010379582008197597 0.0199435709207078 1.7056711104438164e-07 6.768104706280642 -0.1743722072845929 QQPPEPEWIGDGESTS(ph)PSDK ddPTM_A549_PD325901_60min_R1 1 QQPPEPEWIGDGESTSPSDK 20 0 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.002)T(0.065)S(0.845)PS(0.087)DK 154.33 3.6977e-27 5582300.0 2126.4 2212.1 1753.1 1923.6 2400.1 1928.9 1662.4 2521.4 2425.6 2726.8 2646.8 True False 2342.270562627056 2398.521430365625 1872.0759082466964 2042.4164031874298 2231.525255895503 1913.1916779247574 1725.6635417001858 2471.108698999964 2323.6604672512153 2554.6293826414003 2321.260379447595 1.0090511962231745 1.0332840949693098 0.8064911307762063 0.8798738914733368 0.9613420690127633 0.8242038225716203 0.7434166183936904 1.064554722459886 1.0010339588892616 1.100535469980038 1.0 11.1806926458057 -8.304138532195925 24.99997663650054 1.0053068833082863 0.8953145715915563 0.37060852735443595 0.08801561888165557 470.2907037986463 275349.92977284 0.013861126632143278 0.016757335237741935 4.96433942615769e-09 8.304138532195925 -0.10999231171673007 QQPPEPEWIGDGESTS(ph)PSDKVVK ddPTM_A549_MK2206_60min_R1 2 QQPPEPEWIGDGESTSPSDKVVK 23 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.002)T(0.128)S(0.85)PS(0.02)DKVVK;QQPPEPEWIGDGES(0.002)T(0.121)S(0.859)PS(0.018)DKVVK 133.62 1.0666e-22 148163000.0 3917.3 4503.6 3734.1 3210.6 6787.6 5155.2 4353.3 4175.4 6319.4 6876.700000000001 6916.299999999999 True False 4578.444471210138 4732.814003569108 4263.651529240892 3997.197144129309 5789.153031479354 5700.719842255195 5144.238259972077 4767.27573662621 4888.065990008149 5323.248693924433 5198.791829830731 0.8806747069461345 0.9103680544414497 0.8201235342365523 0.7688703981554604 1.1135573842870803 1.0965470495557053 0.9895064908070322 0.9169968509359278 0.9402311440824321 1.023939574456428 1.0 12.343960672602307 -6.748724988232095 24.999798982264533 0.9860968203379049 0.8479001338150333 0.5742386787524267 0.06671147708861654 163.25215963627508 320994.2347009603 0.01030531742270893 0.021341531598649467 1.7835077948427912e-07 6.748724988232095 -0.13819668652287165 QQPPEPEWIGDGESTS(ph)PSDKVVK ddPTM_A549_PD325901_60min_R1 2 QQPPEPEWIGDGESTSPSDKVVK 23 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.003)T(0.117)S(0.864)PS(0.016)DKVVK;QQPPEPEWIGDGES(0.007)T(0.166)S(0.823)PS(0.004)DKVVK 212.28 6.1470999999999995e-74 222200000.0 8263.3 8255.0 9081.2 8753.900000000001 9065.7 9628.2 9063.099999999999 8664.400000000001 10891.900000000001 10175.0 10055.3 True False 9102.184132880056 8950.677820925017 9697.5048416918 9294.60852145064 8428.956506967152 9549.791131419533 9408.001230018617 8491.58174490969 10434.151320602545 9532.548763523631 8818.561845798475 1.0321619660939059 1.0149815783385914 1.0996696526329959 1.0539823481397903 0.9558198552503266 1.0829193351940312 1.066840760945729 0.96292138031049 1.1832032822419682 1.0809640993860388 1.0 13.1063276811355 -8.743865891584017 24.99989670153202 1.0865126855820797 1.0360701622987756 0.14879318206364556 0.057700325927242044 466.9785731619737 664319.1685549378 0.012673994949078915 0.014354890093025539 1.8035745915692948e-09 8.743865891584017 -0.05044252328330412 QQPPEPEWIGDGESTS(ph)PSDKVVKK ddPTM_A549_PD325901_60min_R1 1 QQPPEPEWIGDGESTSPSDKVVKK 24 2 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.014)T(0.103)S(0.741)PS(0.142)DKVVKK 171.07 1.1372999999999999e-41 23252000.0 4413.4 3576.3 3736.2 4273.1 3974.0 4717.4 4459.2 4263.1 4015.4 5365.0 5251.2 True False 4861.445119026642 3877.687352025943 3989.76099959575 4537.0396820857795 3694.879949555737 4678.983058448986 4628.8972961678655 4178.069126162745 3846.6467019296397 5026.25298440337 4605.335690099446 1.0556114572663573 0.8419988493699163 0.8663344581314542 0.9851702432549078 0.8023041528761937 1.015991748116835 1.005116153881914 0.907223578759907 0.8352587000767748 1.091397744405215 1.0 12.169090605102625 -6.221576277702762 24.852713387679803 0.9270127410857149 0.9133833856944102 0.0 0.09612969462712545 4598.471843056928 2866919.8752917834 0.01234849380476602 0.03267055895912494 6.003765519699761e-07 6.221576277702762 -0.01362935539130461 QQPQPSQTES(ph)PQEAQIIQAK ddPTM_A549_MK2206_60min_R1 1 QQPQPSQTESPQEAQIIQAK 20 0 E5RHN2;E5RK20;Q8WUE3;O96020-2;O96020 E5RHN2 CCNE2 G1/S-specific cyclin-E2 1 QQPQPSQT(0.018)ES(0.982)PQEAQIIQAK 98.035 2.6824e-07 2714400.0 3540.4 3191.9 3051.8 2472.8 4787.0 2491.8 3302.2 3130.9 5539.5 4329.0 4930.1 True False 4137.932965530436 3354.354076292798 3484.59112957268 3078.6361110082107 4082.838641300556 2755.4806220770274 3902.1669956308538 3574.7146629791173 4284.812094763765 3351.0758933789252 3705.820106162038 1.1166038412522727 0.9051583671628252 0.9403022893039253 0.8307570315917533 1.101736869124222 0.7435548793896428 1.0529833839322988 0.9646217464887412 1.1562385577321952 0.9042737632641034 1.0 11.855577134120326 -8.345743896198 2.2417548775498806 1.072007889120571 0.9427655835211585 0.0 0.12223016730827253 0.3551871434946834 3.4914257843565744 0.018824329167300705 0.023449545885705227 4.510826299118091e-09 8.345743896198 -0.12924230559941263 QQPTQFINPET(ph)PGYVGFANLPNQVHR ddPTM_A549_MK2206_60min_R1 2 QQPTQFINPETPGYVGFANLPNQVHR 26 0 Q15019;Q15019-3;Q15019-2;C9JT15;C9JSE7;A0A1B0GXJ2;C9JFT1;F8WB65;C9JZI2;C9IZU3;C9J938;C9JB25 Q15019 SEPT2 Septin-2 1 QQPTQFINPET(0.999)PGY(0.001)VGFANLPNQVHR;QQPTQFINPET(0.948)PGY(0.052)VGFANLPNQVHR 103.02 4.9028e-12 8936100.0 1176.96 1429.45 1317.31 1210.8600000000001 1996.04 1434.6 1203.17 1441.45 2470.15 2059.67 2296.3 True False 1375.602074090696 1502.2028993253973 1504.1243662420181 1507.520754357571 1702.4251601381998 1586.4084197895918 1421.7704149152607 1645.7799517554847 1910.6649690189927 1594.3891164970603 1726.065335344087 0.796958287686412 0.8703047726903899 0.8714179790547584 0.8733856844747132 0.9863040090535306 0.9190894384501065 0.8237060242171158 0.9534864747326626 1.1069482306926153 0.9237130738039082 1.0 10.753271359371848 -8.550324989664059 5.448049011724952 1.0501015224018944 0.8826105042350539 0.42452487211664935 0.06400008369610113 0.08523432391354177 7.112444667013027 0.010056731908724345 0.011547115346790688 2.8162746781384995e-09 8.550324989664059 -0.16749101816684042 QQPTQFINPET(ph)PGYVGFANLPNQVHR ddPTM_A549_PD325901_60min_R1 2 QQPTQFINPETPGYVGFANLPNQVHR 26 0 Q15019;Q15019-3;Q15019-2;C9JT15;C9JSE7;A0A1B0GXJ2;C9JFT1;F8WB65;C9JZI2;C9IZU3;C9J938;C9JB25 Q15019 SEPT2 Septin-2 1 QQPTQFINPET(1)PGYVGFANLPNQVHR;QQPTQFINPET(0.994)PGY(0.006)VGFANLPNQVHR 148.3 1.6337999999999997e-32 16403600.0 2006.5 2156.2 2167.26 1876.98 2216.2 2095.85 2519.3 2087.1 2599.9 2279.0 2778.3 True False 2210.1984028927695 2337.9105411845585 2314.343296393095 1992.9167916691315 2060.541757474943 2078.7820924768534 2615.173340113857 2045.4711532017232 2490.6352443957935 2135.103551063426 2436.5867130947786 0.9070879320709803 0.959502294180662 0.9498300569215455 0.8179133461406226 0.8456673207651986 0.853153340000173 1.0732937703629888 0.8394821913001863 1.022182067648381 0.8762682401528694 1.0 11.25064585064635 -8.783076881854237 24.993332047744275 1.0104748815073508 0.9079050248597196 0.028312679990136758 0.07959201303434285 201.75935390969786 233049.83985671276 0.011743568855874936 0.012507225753782453 1.647870648086886e-09 8.783076881854237 -0.10256985664763119 QQQEAT(ph)PPAHR ddPTM_A549_MK2206_60min_R1 1 QQQEATPPAHR 11 0 P35346 P35346 SSTR5 Somatostatin receptor type 5 1 QQQEAT(1)PPAHR 54.898 0.01608 3405800.0 294.4 426.55 341.66 291.55 292.92 0.0 259.39 342.08 444.97 418.17 419.96 True False 344.08752261104974 448.2595730576434 390.1125255029172 362.9797630881771 249.83185602877774 0.0 306.5178054014555 390.5708875760634 344.1850054710772 323.705106568322 315.6723416936387 1.090014794343269 1.4200153572297478 1.23581471664541 1.1498624210810664 0.7914277655381052 0.0 0.9709998784085185 1.237266735123453 1.0903236046099665 1.0254465273441 1.0 8.302284051155914 -6.559282557263564 6.15557379179147 0.9582414563238811 1.2549904718654126 0.1962069396676015 0.31663244946915947 0.2833454305596942 29.681982640229894 0.04857707149875982 0.10313169897705085 2.7587823748897075e-07 6.559282557263564 0.29674901554153144 QQQEAT(ph)PPAHR ddPTM_A549_PD325901_60min_R1 1 QQQEATPPAHR 11 0 P35346 P35346 SSTR5 Somatostatin receptor type 5 1 QQQEAT(1)PPAHR 67.964 0.0038685000000000004 2916600.0 257.76 423.17 241.94 221.69 399.58 366.32 165.21 390.81 405.96 340.0 412.43 True False 283.92760544711695 458.8320210152443 258.3595033034086 235.38328780548 371.51487927616563 363.336811373009 171.49715695638088 383.01498796548606 388.8989129639279 318.53234197523716 361.7037246091778 0.7849728552115457 1.2685299868311115 0.7142848849084067 0.6507626872236731 1.0271248372617363 1.0045149846482664 0.4741371052832928 1.0589191150280113 1.075186365261056 0.8806443514492767 1.0 8.498664643857778 QQQEKEDAEHHPDEDVDES(ph)ES ddPTM_A549_MK2206_60min_R1 3 QQQEKEDAEHHPDEDVDESES 21 1 Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 Q5JY65 CRNKL1 Crooked neck-like protein 1 1 QQQEKEDAEHHPDEDVDES(0.5)ES(0.5);QQQEKEDAEHHPDEDVDES(0.5)ES(0.5);QQQEKEDAEHHPDEDVDES(0.875)ES(0.125) 72.876 0.00016144 14138000.0 1389.22 1873.4899999999998 1693.21 1137.47 1875.52 1616.23 1451.9299999999998 1146.04 1761.65 2268.69 2443.28 True False 1623.6863728319383 1968.8426386772112 1933.332638607956 1416.1502010629679 1599.6334924863206 1787.258385833355 1715.7268869136644 1308.4946796003028 1362.639087776981 1756.1913533263644 1836.5461449024526 0.8840977817729594 1.072035485817747 1.052700278712923 0.7710942657191912 0.8710009802510487 0.9731627984377624 0.9342138729679426 0.7124757976989481 0.7419574463506643 0.9562467886804139 1.0 10.842779430220125 -6.247233068988045 24.836590652245878 0.8684273315234188 1.0098536180391504 0.25588018093449827 0.10073991598356745 886.021174053123 1549008.776200714 0.01664258833136283 0.04380963724056855 5.659354919199955e-07 6.247233068988045 0.14142628651573164 QQQEKEDAEHHPDEDVDES(ph)ES ddPTM_A549_PD325901_60min_R1 2 QQQEKEDAEHHPDEDVDESES 21 1 Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 Q5JY65 CRNKL1 Crooked neck-like protein 1 1 QQQEKEDAEHHPDEDVDES(0.5)ES(0.5);QQQEKEDAEHHPDEDVDES(0.527)ES(0.473) 83.45299999999999 3.4733e-05 14492200.0 1276.68 1552.25 1211.6399999999999 936.52 1667.67 1340.1 1475.57 1506.56 1489.13 1748.88 1995.12 True False 1406.2876137578573 1683.0635551218481 1293.8691765832111 994.3667134087611 1550.5386123491746 1329.1866699087382 1531.723623812886 1476.5104789265438 1426.5470446890688 1638.4554183342723 1749.7328881077108 0.8037155975725642 0.9618974224928905 0.7394666839591133 0.5682962926324955 0.8861573231477866 0.7596511895859819 0.875404259829284 0.8438490748855674 0.8152941825491097 0.9364031672892758 1.0 10.77291898362528 -10.898388552130358 0.405664478560495 1.0722166914773295 0.7921593474461076 0.2967508498308761 0.09636035629138255 2.1460666763424263 0.4064258048042037 0.258892114332159 0.028779822925509853 1.2636053263333792e-11 10.898388552130358 -0.28005734403122184 QQQEPTGEPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 QQQEPTGEPSPK 12 0 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 QQQEPTGEPS(1)PK;QQQEPTGEPS(1)PK 183.96 3.3806e-19 57455000.0 5091.799999999999 6057.2 6256.200000000001 4999.299999999999 6790.0 5106.3 5670.7 5895.1 7652.6 7622.6 6988.1 True False 5951.171357442059 6365.4856076069855 7143.423233774364 6224.128724427108 5791.199994658611 5646.645276712389 6700.992787270263 6730.748477986588 5919.298318691072 5900.649365874385 5252.761908251544 1.1329604237521953 1.2118359291342462 1.3599366121188146 1.184924965787931 1.102505709531825 1.0749859550729104 1.275708456677562 1.281373227180406 1.1268925609197076 1.1233422471719263 1.0 12.358860477650921 -9.702279584275441 0.8231106886485798 1.015247851784643 1.2019562917953965 0.23279899987802954 0.08739696146950315 0.37433147734103434 0.5340611826516641 0.0316243954958566 0.018394348493137456 1.9848167472809393e-10 9.702279584275441 0.18670844001075348 QQQEPTGEPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 QQQEPTGEPSPK 12 0 F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2;P52926 F5H2U8 HMGA2 High mobility group protein HMGI-C 1 QQQEPTGEPS(1)PK;QQQEPTGEPS(1)PK 183.96 3.3806e-19 100571000.0 7010.0 7810.0 7376.4 6370.5 8113.7 6116.8 7090.700000000001 7691.700000000001 6711.299999999999 7352.9 7568.9 True False 7721.650039510748 8468.176109197382 7877.006861896599 6763.991316544772 7543.821702745447 6066.986808818573 7360.540468679919 7538.283009478082 6429.247400174424 6888.636639146235 6637.973283210257 1.1632541605796285 1.2757171124229054 1.1866584160289237 1.0189844140610296 1.1364646076275111 0.9139818058870608 1.1088535844664043 1.1356302123940483 0.9685557813913211 1.037762031457703 1.0 12.696527107471244 -6.138057502310081 0.5086780395326248 0.9931622604847079 1.296866004726581 0.4179358279146945 0.07808319646218204 1.1676653937480006 0.3382796511103168 0.015742425471158363 0.17900793288225897 7.276834499862382e-07 6.138057502310081 0.3037037442418731 QQQLEEEAAKPPEPEKPVS(ph)PPPIESK ddPTM_A549_MK2206_60min_R1 1 QQQLEEEAAKPPEPEKPVSPPPIESK 26 2 C9J0Q5;C9JE98;C9JQE8;C9J330;H7C1Y3;H0YGK8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 QQQLEEEAAKPPEPEKPVS(1)PPPIESK 136.79 6.9327e-25 34109000.0 3454.2 4332.4 4105.2 4308.8 5438.4 4169.9 3798.6 4286.0 6733.9 5986.7 5921.9 True False 4037.1845129180956 4552.900654823433 4687.37908942977 5364.456193429381 4638.418564204917 4611.156050244401 4488.756450125177 4893.553625324509 5208.682401828634 4634.300312056273 4451.328793874561 0.9069616511980949 1.022818323618027 1.0530291754408339 1.2051359137548696 1.0420300946063137 1.0359055158068253 1.0084081985366078 1.0993467011599976 1.1701410169916593 1.0411049209470884 1.0 12.120020352914223 -5.335489242342471 2.064835707840237 1.0797257398709021 0.8750405940171021 0.38309651610772977 0.061117360738251685 0.5463996162532958 2.8448888474557275 0.010356754237295642 0.19611996633933987 4.618604322313046e-06 5.335489242342471 -0.20468514585380004 QQQLEEEAAKPPEPEKPVS(ph)PPPIESK ddPTM_A549_PD325901_60min_R1 2 QQQLEEEAAKPPEPEKPVSPPPIESK 26 2 C9J0Q5;C9JE98;C9JQE8;C9J330;H7C1Y3;H0YGK8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 QQQLEEEAAKPPEPEKPVS(1)PPPIESK;QQQLEEEAAKPPEPEKPVS(1)PPPIESK 209.18 2.3873999999999997e-81 117322000.0 19215.0 21683.0 22991.0 20300.3 28364.0 17480.6 22660.0 24741.0 24673.0 25634.0 23594.0 True False 21165.69265466462 23510.302506495125 24551.307516114182 21554.203425673637 26371.81049048792 17338.24378927446 23522.338700027794 24247.521346060985 23636.079612668724 24015.46486527418 20692.087574688903 1.0228882213196817 1.1361977094690792 1.1865070369287425 1.0416640345191317 1.274487670482634 0.837916605885771 1.1367793904371895 1.1718257647295665 1.1422762216404394 1.1606110199654538 1.0 14.336791582104684 -10.860114499874907 1.1189257641641013 1.0002627543648637 1.1092631676832472 0.0 0.1165852630896543 0.8174070604870838 1.824244096664366 0.06861841297401147 0.016856628719175717 1.3800203801905089e-11 10.860114499874907 0.1090004133183835 QQQLEEEAAKPPEPEKPVS(ph)PPPVEQK ddPTM_A549_MK2206_60min_R1 2 QQQLEEEAAKPPEPEKPVSPPPVEQK 26 2 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK 127.67 2.3717999999999997e-24 150806000.0 7434.2 8532.8 7470.4 7252.4 10457.5 8023.700000000001 7933.299999999999 7586.9 11513.2 11326.8 10837.7 True False 8688.911211260413 8967.083073464446 8529.815051562933 9029.238325572604 8919.215602966486 8872.762608299001 9374.677919701482 8662.366308906787 8905.478582802449 8768.068013195749 8146.399984696519 1.0665952110850232 1.1007418111447544 1.0470655832744133 1.10837159267094 1.0948659063784918 1.0891636336255273 1.15077554960625 1.063336728515607 1.0931796375738858 1.0763119942142627 1.0 12.991946936441577 -10.610272970873384 0.7209559727103545 0.9947387030438497 1.0919070359547258 0.13744896777737736 0.03391512125851654 0.3887252780729251 0.3308098525446852 0.02216138946327602 0.004913410016548617 2.4531665210010895e-11 10.610272970873384 0.09716833291087612 QQQLEEEAAKPPEPEKPVS(ph)PPPVEQK ddPTM_A549_PD325901_60min_R1 2 QQQLEEEAAKPPEPEKPVSPPPVEQK 26 2 O75376-2;O75376;A0A088AWL3;O75376-3;E7EVU5;E7EW50;J3KS51 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK 182.56 9.0863e-58 265340000.0 13184.3 13511.099999999999 13961.2 11437.5 15721.599999999999 12117.9 13816.5 15198.8 14267.9 14741.5 15947.099999999999 True False 14522.760430231316 14649.727814209571 14908.69098751569 12143.968398552835 14617.36905257561 12019.21584007694 14342.294468178901 14895.648010772067 13668.269780958783 13810.719174199876 13985.707796995905 1.0384001039511757 1.0474784706538982 1.06599474291305 0.868312750046253 1.0451647685443124 0.8593927468339242 1.025496505172201 1.0650621496590695 0.9773026849520403 0.9874880395518048 1.0 13.771665647977526 QQQQQQGEDGS(ph)PQAHRR ddPTM_A549_MK2206_60min_R1 1 QQQQQQGEDGSPQAHRR 17 1 A0A087WUX9;E9PEG3;A0A087WZ66;F5GZG9;P10275-3;P10275-4;P10275 A0A087WUX9 AR Androgen receptor 1 QQQQQQGEDGS(1)PQAHRR 43.534 0.013841 5122500.0 187.97 206.27 115.53 88.351 143.31 110.41 0.0 0.0 155.34 111.86 0.0 True False 219.694740574725 216.76826194959585 131.9138912115905 109.99699896622714 122.22928884160909 122.09351291577357 0.0 0.0 120.15573802700662 86.590748309856 0.0 0.0 QQQQQQGEDGS(ph)PQAHRR ddPTM_A549_PD325901_60min_R1 2 QQQQQQGEDGSPQAHRR 17 1 A0A087WUX9;E9PEG3;A0A087WZ66;F5GZG9;P10275-3;P10275-4;P10275 A0A087WUX9 AR Androgen receptor 1 QQQQQQGEDGS(1)PQAHRR;QQQQQQGEDGS(1)PQAHRR 47.397 0.0053272 7801300.0 572.54 512.13 648.39 441.10999999999996 581.05 567.94 162.47 367.68 507.71999999999997 538.68 528.9 True False 630.6638393183291 555.2889924203915 692.3936444858113 468.3563628665039 540.2390525136791 563.3148849399071 168.6528847569953 360.3463339606198 486.38229404386 504.6676528682962 463.84865297333914 1.3596327924543485 1.197133998042047 1.4927145741341805 1.009718061838209 1.1646881995898146 1.214436824013554 0.3635946416485315 0.7768618743435945 1.0485797273013016 1.0880006865025935 1.0 8.85751034163025 -6.697692432964569 1.3375531973198396 0.9640721241852308 1.3277373693406618 0.3593920045010659 0.22926373143352016 0.4278654177601429 1.5137900692566553 0.036124884587116365 0.10382956682415498 2.005892095779795e-07 6.697692432964569 0.36366524515543097 QQQS(ph)PPK ddPTM_A549_PD325901_60min_R1 1 QQQSPPK 7 0 J3QS41;P42694;P42694-2 J3QS41 HELZ Probable helicase with zinc finger domain 1 QQQS(1)PPK 78.516 0.016738 5378200.0 2700.3 2647.8 2265.8 2239.2 2624.8 2045.1 1921.1 2226.2 2405.5 3095.2 2946.3 True False 2974.4324681442035 2870.939398454907 2419.5708133622516 2377.5102984078244 2440.443103068419 2028.4453836507435 1994.2085117662575 2181.7966945798853 2304.4052003515826 2899.7685437698647 2583.9237781345214 1.15113011200803 1.1110774329913082 0.9363940352408826 0.9201162660162838 0.9444717850115187 0.7850252398370633 0.7717752855720798 0.8443734730267647 0.8918239848449636 1.1222345520824029 1.0 11.335347797987572 -5.744383038727072 3.3785996438576236 0.9143843196455306 1.1448324100532687 0.45686622004151134 0.09245543879532078 0.14505912729402506 3.3720909222886615 0.011861984432727995 0.05094557080620409 1.801428217667603e-06 5.744383038727072 0.23044809040773817 QQQS(ph)PPKGK ddPTM_A549_PD325901_60min_R1 1 QQQSPPKGK 9 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QQQS(1)PPKGK 46.706 0.010024 27528000.0 3438.5 3972.7 3295.9 3051.9 4244.3 3123.6 2808.6 3667.1 3480.0 4150.9 4904.7 True False 3787.57398871009 4307.493371191862 3519.5795938567617 3240.4089316322084 3946.1950100401164 3098.162437226281 2915.482809924891 3593.956813715703 3333.7477020259857 3888.811465602972 4301.452993454972 0.8805336230509103 1.0014042644999448 0.818230397777705 0.7533289185218965 0.9174097720106645 0.7202595127600836 0.6777902291065477 0.8355215828661188 0.7750282769795619 0.9040692695050093 1.0 12.070608356655548 -10.802434756105491 1.023051494601316 1.0011118290073098 0.8172396994116696 0.21711166257960546 0.09089956854490952 0.48615170750035913 0.8942598389354038 0.06497314122765231 0.01581974090256104 1.576032771762806e-11 10.802434756105491 -0.18387212959564014 QQQS(ph)QTAY ddPTM_A549_MK2206_60min_R1 2 QQQSQTAY 8 0 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QQQS(0.982)QT(0.018)AY;QQQS(0.97)QT(0.03)AY 93.26700000000001 0.0025644 23499000.0 2663.25 2500.97 1776.48 1861.9 2652.8999999999996 2107.57 2151.01 1885.13 3595.2 3694.9 3765.7000000000003 True False 3112.7414897889907 2628.258690493435 2028.4115767295627 2318.0655835838675 2262.6619242753786 2330.5916585082605 2541.8206738755753 2152.3529504685 2780.8929403546686 2860.2195237805036 2830.5727619671766 1.0996860888415085 0.9285253945095061 0.7166081734354951 0.8189387019936101 0.7993653986491716 0.8233639812489958 0.8979881061630347 0.7603948499005088 0.9824488448839656 1.0104737677870974 1.0 11.466878294341736 -8.856668956812102 8.602805791224878 0.9921722105896442 0.8507529256431513 0.3019398494044072 0.0959374932748354 0.23303456746310994 18.924548339417694 0.016587092372901263 0.01763329117995504 1.3910125336152748e-09 8.856668956812102 -0.14141928494649292 QQQS(ph)QTAY ddPTM_A549_PD325901_60min_R1 2 QQQSQTAY 8 0 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QQQS(0.999)QT(0.001)AY;QQQS(0.798)QT(0.202)AY 116.37 0.0012862 29947000.0 2446.16 2795.3 3374.2 2843.8 3577.8 3109.1 2845.9 3251.6 2571.54 2865.3 3013.8999999999996 True False 2694.492362432185 3030.8697411062044 3603.1935027129102 3019.4550672615987 3326.507670739941 3083.7805204188203 2954.202281836235 3186.744287169146 2463.467116571236 2684.384469004842 2643.209406686228 1.0194017755900204 1.1466627401670697 1.3631888164434944 1.1423442499953371 1.2585108324468168 1.1666803669123338 1.1176572973610506 1.20563443785725 0.9319984675976417 1.0155776769765037 1.0 11.36807501082212 -8.75947267952455 24.99995469417155 0.9678881579630648 1.1818428756076078 0.5147201227255815 0.08391473298677718 26.261953752372225 333831.2859879831 0.014085710648340393 0.015584520784527142 1.739912148501016e-09 8.75947267952455 0.213954717644543 QQRPGT(ph)IK ddPTM_A549_MK2206_60min_R1 1 QQRPGTIK 8 1 Q8TF42 Q8TF42 UBASH3B Ubiquitin-associated and SH3 domain-containing protein B 1 QQRPGT(1)IK 51.927 0.011164 8668400.0 2343.7 2343.9 2378.9 1984.2 2841.8 2398.1 2012.6 2189.9 3230.3 3083.8 3015.6 True False 2739.259262036404 2463.1944983936482 2716.263791251211 2470.329089074122 2423.774984509697 2651.865350270054 2378.2633684836314 2500.3250312874784 2498.6422077291077 2387.167438207885 2266.74329367401 1.2084558801524123 1.086666719283075 1.1983111624645433 1.089814226413849 1.0692763451750043 1.1699010459944168 1.0491983698025487 1.1030472829743643 1.1023048859137587 1.0531265030627652 1.0 11.146405301275195 -14.999999999944635 0.10451030868850185 0.6104426453194579 1.19701491267897 0.43455205466228086 0.046602687257307346 53.92112655540718 0.4025719647694956 4.550985438578151 0.24711575758983081 1.0000000001274837e-15 14.999999999944635 0.5865722673595121 QQRPPRS(ph)R ddPTM_A549_PD325901_60min_R1 2 QQRPPRSR 8 2 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 1 QQRPPRS(1)R;QQRPPRS(1)R 61.765 0.0035061 42825000.0 2704.79 2877.8 3781.8 2725.7 3685.6 3285.3999999999996 3260.1 3599.1 3630.8 3800.3999999999996 4008.5 True False 2979.378289638843 3120.322305639977 4038.4556898108253 2894.060298486161 3426.736170629749 3258.6447916708994 3384.1648894951713 3527.3131270606705 3478.2101024471103 3560.44209541968 3515.4799119750965 0.8475025783791049 0.8875949753007951 1.1487636939850714 0.823233348205991 0.9747562940004146 0.9269416618114311 0.9626466298292262 1.003366031205374 0.9893983722105677 1.0127897711181408 1.0 11.779505935372569 -8.054271172145784 3.614009843011923 0.9954009612036853 0.9392075789300708 0.12826880177613043 0.07995003734972635 0.4278316860773047 11.254027906638537 0.012083763545828399 0.01615117634731948 8.825286801385463e-09 8.054271172145784 -0.05619338227361448 QQS(ph)DHDAER ddPTM_A549_MK2206_60min_R1 2 QQSDHDAER 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 QQS(1)DHDAER;QQS(1)DHDAER 66.498 0.0016419 5612300.0 1673.6599999999999 1241.26 909.6300000000001 662.87 328.34000000000003 95.03399999999999 0.0 0.0 370.11 1830.01 2343.7400000000002 True False 1956.1328909416072 1304.434832149878 1038.6292120037997 825.2731797573648 280.0416209493678 105.09043480153629 0.0 0.0 286.280675944222 1416.6094700028566 1761.724674066694 1.1103510779730121 0.7404305856367291 0.5895525148128112 0.46844617204136535 0.15895878911824007 0.059652019608120596 0.0 0.0 0.162500236364053 0.8041037801513062 1.0 10.78277275920674 -10.819599559159695 1.1155729848871148 0.9927376701147586 0.33987068940483767 0.2684419548224687 0.33534780307270123 0.4852966525158951 1.0906352058388935 0.23908443753530256 0.061962509387999624 1.5149574698309496e-11 10.819599559159695 -0.6528669807099209 QQS(ph)DHDAER ddPTM_A549_PD325901_60min_R1 4 QQSDHDAER 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 QQS(1)DHDAER;QQS(1)DHDAER;QQS(1)DHDAER;QQS(1)DHDAER 89.301 0.00033633 15696800.0 2147.2299999999996 2293.31 2354.7899999999995 1600.1699999999998 2001.19 1327.66 1300.7800000000002 1466.58 1352.5 2342.54 2701.7 True False 2365.2152088928187 2486.5752820721464 2514.6002099025945 1699.0088666502547 1860.6333181307107 1316.8479771442705 1350.2818947141286 1437.3279113902474 1295.6591284454441 2194.631624619622 2369.408027487371 0.9982304362330542 1.0494500116592518 1.0612778300448287 0.7170604838593215 0.7852734930183434 0.5557708768889066 0.5698815396291325 0.6066189928943796 0.5468282007212665 0.9262362578162235 1.0 11.21031094611241 -6.2623019894693295 24.513511583793402 0.7332905089169252 1.0376324973462354 0.5018690472617948 0.14225729652705063 51.466225603254145 1462598.8532137563 0.02667151761761466 0.06551101571981682 5.466357240318395e-07 6.2623019894693295 0.30434198842931026 QQS(ph)EEDLLLQDFSR ddPTM_A549_MK2206_60min_R1 1 QQSEEDLLLQDFSR 14 0 C9JA28;Q9UNL2;Q9UNL2-2 C9JA28 SSR3 Translocon-associated protein subunit gamma 1 QQS(1)EEDLLLQDFSR 48.111999999999995 0.030329000000000002 996800.0 237.74 561.16 497.27 424.46 485.27 302.08 634.83 462.72 577.93 595.07 517.71 True False 277.86469981505087 589.7206470918469 567.7903633929508 528.4527190547337 413.887425833282 334.0459050955248 750.1703936273796 528.3119770205685 447.0297777645677 460.6432737059361 389.14831893088325 0.7140328925959012 1.5154135798710398 1.45905901624567 1.3579725090591805 1.0635724367777435 0.8584025391995971 1.927723587983988 1.357610842241367 1.1487388124731044 1.1837216076674126 1.0 8.6041763146602 -9.113568043864547 2.3399320578256364 1.0539231897645929 1.2956192351925542 0.048508571259588296 0.31495205008337335 0.4631013512684198 5.239237400988424 0.059998744457216736 0.057827430443296225 7.69895810104069e-10 9.113568043864547 0.2416960454279613 QQS(ph)EEDLLLQDFSR ddPTM_A549_PD325901_60min_R1 2 QQSEEDLLLQDFSR 14 0 C9JA28;Q9UNL2;Q9UNL2-2 C9JA28 SSR3 Translocon-associated protein subunit gamma 1 QQS(1)EEDLLLQDFSR;QQS(1)EEDLLLQDFSR 123.36 1.2844e-06 5880400.0 2881.9 3270.8999999999996 3108.8 2691.3 3299.1000000000004 2752.1 3270.3 3638.1000000000004 2649.8999999999996 3084.1 3057.1 True False 3174.46836645735 3546.550222224547 3319.781862733063 2857.5354886142295 3067.3825972771338 2729.6878100558474 3394.753056076824 3565.535241465763 2538.5339182754756 2889.369399664201 2681.0960805535915 1.1840188755197043 1.3227986299887682 1.2382181626432411 1.0658086852389888 1.1440778342579137 1.0181238299718907 1.2661810521075683 1.3298796963402941 0.9468269103400876 1.0776821541836 1.0 11.388607205755944 -8.780767919956059 24.998858792482274 0.9748904568014796 1.192084290616692 0.4139355638382629 0.09735322951914284 139.09577651738817 179900.85266510415 0.01681309379223344 0.017911770211919274 1.6566550169859264e-09 8.780767919956059 0.2171938338152124 QQS(ph)IEDKEDKPPPR ddPTM_A549_MK2206_60min_R1 4 QQSIEDKEDKPPPR 14 2 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 QQS(1)IEDKEDKPPPR;QQS(1)IEDKEDKPPPR;QQS(1)IEDKEDKPPPR;QQS(1)IEDKEDKPPPR 89.04899999999999 2.4333000000000002e-05 209876000.0 18491.3 20133.2 19217.299999999996 17637.3 24216.199999999997 18502.5 17346.600000000002 17717.6 26094.800000000003 29736.3 28418.0 True False 21612.179371119924 21157.893884149933 21942.60210837442 21958.439291768478 20654.02905900617 20460.42226903452 20498.252681972666 20229.12405787436 20184.369464832846 23018.849177242726 21361.02630309988 1.011757537510433 0.9904905122035046 1.0272260235544086 1.0279674291015644 0.966902468352323 0.9578389155424304 0.9596099171975642 0.9470108678691501 0.9449157160535737 1.077609701454385 1.0 14.382693343373742 -6.771523686761839 24.997440013075426 0.9685967101669183 1.0135743602216138 0.13679996659678373 0.03695918425932457 141.6380372840373 351099.5634052146 0.0034443020000106835 0.0065657110233028745 1.692295942770656e-07 6.771523686761839 0.04497765005469556 QQS(ph)IEDKEDKPPPR ddPTM_A549_PD325901_60min_R1 2 QQSIEDKEDKPPPR 14 2 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 QQS(1)IEDKEDKPPPR;QQS(1)IEDKEDKPPPR 138.97 3.1167e-10 252990000.0 16609.6 19822.1 20547.0 16199.9 24403.0 17392.0 20102.4 20452.3 18428.3 19139.7 19939.7 True False 18295.79436465874 21492.57793266601 21941.442979148287 17200.53103035768 22689.017465779736 17250.365318299213 20867.407832455356 20044.36283198103 17653.822637139514 17931.216075598364 17487.243308172594 1.0462366218755745 1.229043226191148 1.2547113683089226 0.9836044896978748 1.2974610729626044 0.9864542406313591 1.1932931603177874 1.146227708892995 1.0095257626391616 1.02538837938043 1.0 14.09401526005631 -8.767133927967043 7.456975831296535 1.004340648379643 1.145316397679639 0.2581402159187888 0.09821583530480957 0.10931299418903863 36.611067228176175 0.015204252784147682 0.01658681377740794 1.7094880609448827e-09 8.767133927967043 0.1409757492999959 QQS(ph)LGGFFK ddPTM_A549_PD325901_60min_R1 2 QQSLGGFFK 9 0 H7C1E7;G3XAF7;O75363;H0Y542;O75363-2 H7C1E7 BCAS1 Breast carcinoma-amplified sequence 1 1 QQS(1)LGGFFK;QQS(1)LGGFFK 78.655 0.0018155 2764900.0 2109.6 2480.8 2150.2 2241.85 3152.0 2001.8899999999999 2544.3 3081.5 2561.7 2683.0 2799.0 True False 2323.7650389945607 2689.8657223683567 2296.1255022029814 2380.3239828892383 2930.614393809683 1985.587271564513 2641.124728794383 3020.037065110016 2454.040657551715 2513.594922116356 2454.7407443228894 0.9466437726137727 1.0957840369046075 0.9353841164339902 0.9696844721359045 1.1938590258817974 0.8088786060835982 1.0759281748602356 1.2302875862123097 0.9997148021546497 1.0239757204216289 1.0 11.26135494804919 QQS(ph)LPPPK ddPTM_A549_PD325901_60min_R1 1 QQSLPPPK 8 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 QQS(1)LPPPK 96.331 0.0024875 5016000.0 3998.1 5040.7 4864.9 4920.0 6204.5 5505.1 6070.4 5041.3 5201.5 6010.6 6650.4 True False 4403.984168754342 5465.497479338191 5195.061369020223 5223.897225869282 5768.717324363004 5460.268290810091 6301.412393850336 4940.747316676655 4982.899043703494 5631.089690224586 5832.442960359034 0.7550839671620623 0.9370854574121279 0.8907179040290905 0.8956619484106723 0.9890739375542719 0.936188888244861 1.0804070329840711 0.8471145539282756 0.8543416673888493 0.9654770271217443 1.0 12.509884577791485 -4.58687669066203 1.5145600451703096 0.9351646343266131 4.5848263620305935e-14 0.3867197153045332 0.06582036144169275 7.078662679328972 3.3366199641228214 0.010465152412238006 16.417584639117862 2.5889478914122137e-05 4.58687669066203 -0.9351646343265673 QQS(ph)PKDKLNNK ddPTM_A549_MK2206_60min_R1 4 QQSPKDKLNNK 11 2 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 QQS(1)PKDKLNNK;QQS(1)PKDKLNNK;QQS(1)PKDKLNNK;QQS(1)PKDKLNNK 76.58800000000001 0.00039960000000000006 47465200.0 9660.1 10755.100000000002 12073.9 10322.9 15129.9 11724.8 11123.4 10228.199999999999 15747.599999999999 16519.4 16632.7 True False 11290.488713230301 11302.488651253698 13786.160573873643 12852.010963412591 12904.31175245733 12965.510553707654 13144.377796378234 11678.078672548787 12180.793743749768 12787.656066778425 12502.341550832907 0.9030699303266218 0.9040297455719984 1.1026862862305349 1.0279683138680842 1.0321515933627363 1.0370465805138631 1.0513532799383931 0.9340713197657595 0.9742809932222882 1.0228208863744017 1.0 13.609910700629637 -5.608088049731331 24.997570905581213 1.0029391304825173 0.9033055126139344 0.4837672271510082 0.04359380019937796 14.711618205528074 4313.010366487024 0.006218314589697016 0.024083439902899146 2.465539418168987e-06 5.608088049731331 -0.09963361786858282 QQS(ph)PKDKLNNK ddPTM_A549_PD325901_60min_R1 4 QQSPKDKLNNK 11 2 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 QQS(1)PKDKLNNK;QQS(1)PKDKLNNK;QQS(1)PKDKLNNK;QQS(1)PKDKLNNK 103.83 4.2083000000000003e-05 86717900.0 16163.599999999999 16544.9 20477.2 15734.0 20590.800000000003 17650.300000000003 21201.0 21206.2 19486.199999999997 20717.5 19795.7 True False 17804.516772986593 17939.19678733159 21866.905931406785 16705.853445493358 19144.57324240371 17506.561808738308 22007.815656632356 20783.225705057932 18667.262779085842 19409.39351432934 17360.954395281384 1.025549423586169 1.0333070624393421 1.2595451513512468 0.9622658446723368 1.1027373729872307 1.0083870627237232 1.2676616247902803 1.1971246068537973 1.0752440421224485 1.1179911583435016 1.0 14.083558639744984 -9.804430092539585 1.2250502347724272 1.0141086745756778 1.1052175578451688 0.0 0.10090510429222721 0.5883506446562752 1.7891499293320048 0.027129138006100686 0.01780412059796466 1.5688084051141545e-10 9.804430092539585 0.09110888326949107 QQS(ph)PQEPK ddPTM_A549_MK2206_60min_R1 2 QQSPQEPK 8 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 QQS(1)PQEPK;QQS(1)PQEPK 125.54 0.0010949000000000002 342280000.0 15900.0 16265.1 16232.2 13798.0 16686.3 13288.5 11907.8 14843.9 14715.6 19923.7 18989.0 True False 18583.53128232232 17092.92411614084 18534.17004176213 17178.510619415767 14231.767374207948 14694.680249807603 14071.293122940184 16948.068282537202 11382.540095984421 15422.9223323894 14273.507230261228 1.3019597063658903 1.1975279684520825 1.298501464480144 1.2035241473795346 0.9970757112894588 1.029507325197093 0.9858329067930599 1.1873793882000945 0.7974592307525039 1.0805278677192456 1.0 13.801052251294399 -6.895641300245519 0.6540860030425196 0.9195992020175229 1.3052967741725476 0.46010708236913134 0.10819873286889754 0.4521537101293078 0.33752189168146657 0.021575392608539096 0.08778371540912028 1.2716239524956946e-07 6.895641300245519 0.38569757215502476 QQS(ph)PQEPK ddPTM_A549_PD325901_60min_R1 2 QQSPQEPK 8 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 QQS(1)PQEPK;QQS(1)PQEPK 165.39 7.8253e-05 419580000.0 19965.5 22259.0 22412.0 16965.2 24799.0 15602.7 21237.7 23178.0 22320.6 24217.0 24147.0 True False 21992.382862175724 24134.844047967308 23933.01309430434 18013.101873235275 23057.203791905584 15475.636784258704 22045.912295215374 22715.696607210746 21382.542803977358 22687.934487100923 21177.07208044473 1.038499693377531 1.139668598014257 1.1301379625753125 0.8505945394533024 1.0887814757544787 0.7307732025216636 1.0410274003634783 1.0726552056356653 1.0097025085787172 1.0713442538664895 1.0 14.370215517179108 QQS(ph)PS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 QQSPSPIR 8 0 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42-6;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12 A0A0A0MRA3 TTN Titin 2 QQS(1)PS(1)PIR;QQS(1)PS(1)PIR 81.263 0.0043247 51919000.0 156.22 228.63 375.89 465.49 1317.32 704.36 613.8 527.68 1117.33 414.74 826.83 True False 182.5861167876977 240.266290442314 429.1968542155694 579.5350708966404 1123.543973043252 778.8949076836722 725.3195148441088 602.480255952225 864.2565390093685 321.0499459505603 621.5052916528988 0.29378047015836073 0.38658768262989956 0.6905763474259673 0.9324700508266981 1.8077786112732475 1.2532393821011472 1.1670367486576263 0.9693887792168646 1.3905859702511472 0.5165683225266274 1.0 9.27962286457444 -6.1410667246029425 2.1215879571557466 1.2127052024178315 0.34460814899927333 0.5051174211546724 0.30555195609472335 0.14455334716353316 1.2444577508597952 0.03477641018286317 0.12304150901407065 7.22658766447374e-07 6.1410667246029425 -0.8680970534185581 QQS(ph)PS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 QQSPSPIR 8 0 A0A0A0MRA3;A0A0A0MTS7;Q8WZ42-6;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12 A0A0A0MRA3 TTN Titin 2 QQS(1)PS(1)PIR;QQS(1)PS(1)PIR 81.263 0.0043247 128152000.0 214.12 0.0 191.57 442.77 455.2 503.65999999999997 238.54 204.53 959.97 352.03 207.74 True False 235.8573047731871 0.0 204.57109220399272 470.1188972963703 423.2283223547489 499.5583599479408 247.61777023409653 200.45048869931895 919.6257992855989 329.8027657221845 182.1892969723604 1.2945727805786997 0.0 1.1228491223336121 2.5803870211305067 2.3230141912175886 2.741974244643624 1.3591235838165738 1.1002319676864931 5.047638991796063 1.810220310429203 1.0 7.509294397770619 -6.190056925536508 3.36524514977134 2.642654798440624 0.6271362128201023 0.192408127078602 1.1355820606137979 0.2868578453780748 6.346705350805571 0.2194216074639179 0.6309211304110203 6.455696048770216e-07 6.190056925536508 -2.015518585620522 QQS(ph)SSSKGDSPELKPR ddPTM_A549_MK2206_60min_R1 1 QQSSSSKGDSPELKPR 16 2 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 QQS(0.21)S(0.21)S(0.21)S(0.21)KGDS(0.16)PELKPR 69.737 0.00032902 16721000.0 1670.1 1739.7 2057.8 1647.8 2505.1 2023.0 2112.8 1996.2 2820.1 3109.7 2810.2 True False 1951.9720499752532 1828.2432991405049 2349.6269829066982 2051.5110739725537 2136.6031084859032 2237.072517241283 2496.668411473824 2279.1674631061082 2181.3518527743104 2407.216610219553 2112.3497824256224 0.9240761479066186 0.865502159893767 1.1123285558363394 0.9711985633443685 1.0114816808570553 1.0590445464351272 1.1819389157258258 1.0789725650876476 1.032666024785655 1.1395918565415493 1.0 11.044633033936071 -5.749254910473166 24.999850609146858 1.035591987946464 0.8947890978792507 0.4508480009004028 0.06624503440531003 156.13434323448612 320347.30435078987 0.008449032317091876 0.03222793570389524 1.7813329017514305e-06 5.749254910473166 -0.14080289006721325 QQS(ph)TSSDR ddPTM_A549_PD325901_60min_R1 1 QQSTSSDR 8 0 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQS(0.76)T(0.183)S(0.045)S(0.012)DR 47.894 0.036604000000000005 7079000.0 248.48 365.6 438.6 400.01 540.44 190.34 107.99 304.14 418.14 518.13 405.53 True False 273.705506678692 396.4103950733114 468.3660335160578 424.7177092113765 502.48135881678496 188.7899341470259 112.09961854439541 298.07368910678554 400.56702992101873 485.4151833753809 355.652380866474 0.7695871626442223 1.11460070675624 1.3169208438165947 1.1941933530056483 1.4128440742969084 0.5308271343132246 0.3151943430584879 0.8381040171320945 1.1262880595516314 1.36485852335015 1.0 8.474324011273788 -7.2250735602629526 24.99697015952538 0.9474760546606703 1.1694528814228335 0.16170106625546699 0.30730191421828396 1118.5716613126463 768879.2205744131 0.04682242429617575 0.08109713107549181 5.955612595548778e-08 7.2250735602629526 0.22197682676216324 QQS(ph)TSSDRVSQTPESLDFLK ddPTM_A549_MK2206_60min_R1 1 QQSTSSDRVSQTPESLDFLK 20 1 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQS(0.261)T(0.261)S(0.225)S(0.225)DRVS(0.021)QT(0.007)PESLDFLK 56.95 0.0017069000000000003 42104000.0 1607.5 1752.3 1524.6 1674.7 2973.5 2373.9 1840.7 1684.0 2913.8 2746.5 2270.8 True False 1878.8067003983092 1841.4845853215547 1740.8112052383872 2085.00157518014 2536.1020889716306 2625.1045223327133 2175.1313635932734 1922.7121570337063 2253.828952382465 2126.063742472908 1706.8976891082848 1.1007143031401214 1.0788488361499748 1.0198685113621657 1.2215152603958261 1.4857961933831767 1.53793899838491 1.2743185355940123 1.1264366747360042 1.320424162950216 1.2455718676282252 1.0 10.73716087094826 -4.174529047899593 12.921617257853965 1.191891860130824 1.2062225320083004 0.0 0.17188610121853928 0.0 0.0 0.02615214059441058 0.0 6.690690676902967e-05 4.174529047899593 0.014330671877476497 QQS(ph)VESLAEEVK ddPTM_A549_MK2206_60min_R1 2 QQSVESLAEEVK 12 0 Q8WXH0;Q8WXH0-2;G3V5X4;A0A0A0MRE3 Q8WXH0 SYNE2 Nesprin-2 1 QQS(1)VESLAEEVK;QQS(1)VESLAEEVK 113.72 3.0196e-05 1919190.0 2251.6 2507.8999999999996 2412.2 2315.5299999999997 2603.8 2711.0 2578.5 2404.5 2961.3 2799.8999999999996 3498.5 True False 2631.615033665217 2635.541397893012 2754.28623197956 2882.834953948092 2220.7844692330023 2997.8762205838434 3046.980073355386 2745.345238472415 2290.5702782243784 2167.400645384998 2629.7258963120175 1.0007183780468714 1.002211447812546 1.0473662809657192 1.0962492166925228 0.8444927558219952 1.139995702513379 1.1586683150622408 1.0439663093109988 0.8710300497237077 0.8241926082199692 1.0 11.3606967158755 -8.73404912737435 24.3568061316264 0.9390975283997046 1.0429996802563042 0.30664609509603735 0.0904759149874966 182.6596527980223 162430.009162446 0.015177769655364031 0.017207645282050373 1.8448067229134383e-09 8.73404912737435 0.10390215185659957 QQSHFAMMHGGTGFAGIDS(ph)SSPEVK ddPTM_A549_MK2206_60min_R1 4 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.429)S(0.429)S(0.141)PEVK;QQSHFAMMHGGTGFAGIDS(0.333)S(0.333)S(0.333)PEVK;QQSHFAMMHGGTGFAGIDS(0.448)S(0.448)S(0.105)PEVK;QQSHFAMMHGGTGFAGIDS(0.333)S(0.333)S(0.333)PEVK 107.18 1.28e-12 64551000.0 7769.789999999999 9410.92 9897.7 8482.74 14096.800000000001 11933.7 12401.4 13122.7 20588.300000000003 18480.4 19776.7 True False 9081.140598872647 9889.895630710671 11301.342690599493 10561.011680804664 12023.17939391804 13196.51621305106 14654.573853678297 14982.882911583278 15925.082922759255 14305.66480480479 14865.59958084719 0.6108829011224526 0.6652873687955912 0.760234569022034 0.7104329444209873 0.8087920926787697 0.8877217593061921 0.9858044254440448 1.0078895795691412 1.0712708112545357 0.9623335222372181 1.0 13.859690032829999 -7.208988607670463 0.8838009573652041 1.0355694856226467 0.6603139972577247 0.9288893511508794 0.04004685662466881 0.09335891217354629 0.14275993348929705 0.006887063207314447 0.017422780030759928 6.180326120387008e-08 7.208988607670463 -0.37525548836492206 QQSHFAMMHGGTGFAGIDS(ph)SSPEVK ddPTM_A549_PD325901_60min_R1 4 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGT(0.004)GFAGIDS(0.353)S(0.353)S(0.291)PEVK;QQSHFAMMHGGTGFAGIDS(0.554)S(0.356)S(0.09)PEVK;QQSHFAMMHGGTGFAGIDS(0.421)S(0.289)S(0.289)PEVK;QQSHFAMMHGGTGFAGIDS(0.56)S(0.365)S(0.074)PEVK 142.53 1.4092999999999998e-32 136528000.0 10547.5 11462.0 11961.9 13065.5 15056.8 13278.199999999999 13281.0 15940.699999999999 14678.300000000001 15589.900000000001 16831.4 True False 11618.274435340885 12427.9429658925 12773.706466748135 13872.526261096576 13999.262311140117 13170.066741573184 13786.41572264205 15622.750233262763 14061.422096163235 14605.551053411022 14761.244503035468 0.7870796011103082 0.8419305678011665 0.8653543042472727 0.9397938133362578 0.9483795426775392 0.8922057174017355 0.9339602578771081 1.0583626759959255 0.9525905551711223 0.9894525526223463 1.0 13.849526737985013 -3.029987936320283 0.3031331891418918 0.9882836681299921 2.388584153129007e-13 0.7657789640165187 0.03563021037644072 9.310668079042417 0.20502126493627384 0.012214581017736205 4.520752786582356 0.0009332802247675159 3.029987936320283 -0.9882836681297533 QQSHFAMMHGGTGFAGIDSS(ph)SPEVK ddPTM_A549_MK2206_60min_R1 1 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.054)S(0.473)S(0.473)PEVK 112.74 4.938399999999999e-13 102510000.0 1916.9 2356.3 2431.2 2393.5 3820.5 3198.8 3055.1 4353.1 5147.5 4959.3 6308.0 True False 2240.42585629457 2476.2256054289674 2775.980717680418 2979.9076074482987 3258.509510985746 3537.2948928084083 3610.172124145058 4970.16525580964 3981.5994688683945 3838.990685616565 4741.549508056659 0.4725092192937614 0.5222397448811744 0.5854585537836478 0.6284670448731905 0.687224609897885 0.7460208707718801 0.7613907896586954 1.0482154087739728 0.8397253813554015 0.8096489721542502 1.0 12.211142884351256 -6.378650672130857 0.30124162802669413 0.9803488270812089 0.26975944685117065 0.7929158843025785 0.07951233424373493 1.0234851045367925 0.11020531617413865 0.032019469896881474 0.24817746909733662 4.181665866894065e-07 6.378650672130857 -0.7105893802300383 down QQSHFAMMHGGTGFAGIDSS(ph)SPEVK ddPTM_A549_PD325901_60min_R1 3 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.09)S(0.693)S(0.218)PEVK;QQSHFAMMHGGT(0.001)GFAGIDS(0.317)S(0.366)S(0.317)PEVK;QQSHFAMMHGGTGFAGIDS(0.005)S(0.547)S(0.448)PEVK 146.15 9.646299999999998e-33 93829300.0 10238.5 11109.9 13377.2 12495.2 15618.1 13209.5 13796.699999999999 15040.7 12797.699999999999 13793.0 15518.4 True False 11277.904982814673 12046.170263197448 14285.05723563842 13267.000125341854 14521.138535519991 13101.92621159576 14321.740968343925 14740.701439299106 12259.857174200566 12922.10762607189 13609.735179242703 0.8286645430114987 0.8851142292298256 1.0496205141027068 0.9748169196985125 1.0669670162037643 0.962687814203656 1.0523159179604875 1.0830997991629794 0.9008152629522913 0.9494753171818089 1.0 13.732351374436155 -5.579997886755985 5.935509164485119 0.9819447058161248 0.8415551860777413 0.47669215281718125 0.05689383982453209 0.13459995529971164 9.580814058269283 0.008991427398545566 0.036708024345884264 2.6302807906111093e-06 5.579997886755985 -0.14038951973838354 QQSHFAMMHGGTGFAGIDSSS(ph)PEVK ddPTM_A549_MK2206_60min_R1 13 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.049)S(0.199)S(0.753)PEVK;QQSHFAMMHGGTGFAGIDS(0.065)S(0.245)S(0.69)PEVK;QQSHFAMMHGGTGFAGIDS(0.047)S(0.17)S(0.783)PEVK;QQSHFAMMHGGT(0.017)GFAGIDS(0.283)S(0.283)S(0.417)PEVK;QQSHFAMMHGGTGFAGIDS(0.172)S(0.172)S(0.656)PEVK;QQSHFAMMHGGTGFAGIDS(0.132)S(0.169)S(0.7)PEVK;QQSHFAMMHGGTGFAGIDS(0.005)S(0.2)S(0.795)PEVK;QQSHFAMMHGGTGFAGIDS(0.033)S(0.161)S(0.807)PEVK;QQSHFAMMHGGTGFAGIDS(0.219)S(0.219)S(0.561)PEVK;QQSHFAMMHGGTGFAGIDS(0.002)S(0.176)S(0.823)PEVK;QQSHFAMMHGGTGFAGIDS(0.002)S(0.164)S(0.834)PEVK;QQSHFAMMHGGTGFAGIDS(0.035)S(0.356)S(0.609)PEVK;QQSHFAMMHGGTGFAGIDS(0.126)S(0.126)S(0.747)PEVK 151.99 1.2174e-32 477343700.0 21205.05 27065.41 27445.830000000005 25657.760000000006 37333.0 29732.3 29434.100000000002 33439.7 54290.9 52077.700000000004 55162.200000000004 True False 24783.944026302455 28442.923763287017 31338.061393852742 31943.912351820614 31841.365154726056 32878.552251296554 34781.89496883836 38179.87987978628 41994.09783475225 40313.31140046656 41463.903340729696 0.5977233697136605 0.6859683115107915 0.7557913961049969 0.7704029234614374 0.7679297555049167 0.7929439730050737 0.8388475798580293 0.9207980147465387 1.0127868929672559 0.9722507567411552 1.0 15.339568315225996 -7.679797864113001 0.565648955564886 1.0168422629194223 0.6669062143717578 0.9004850045014269 0.040334913918593195 0.16702533047073964 0.10825932791907514 0.010586597158595444 0.02316156539604083 2.0902687889032158e-08 7.679797864113001 -0.34993604854766447 QQSHFAMMHGGTGFAGIDSSS(ph)PEVK ddPTM_A549_PD325901_60min_R1 12 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.036)S(0.222)S(0.742)PEVK;QQSHFAMMHGGT(0.007)GFAGIDS(0.289)S(0.217)S(0.486)PEVK;QQSHFAMMHGGTGFAGIDS(0.109)S(0.179)S(0.712)PEVK;QQSHFAMMHGGTGFAGIDS(0.131)S(0.169)S(0.7)PEVK;QQSHFAMMHGGTGFAGIDS(0.141)S(0.162)S(0.698)PEVK;QQSHFAMMHGGTGFAGIDS(0.078)S(0.345)S(0.577)PEVK;QQSHFAMMHGGTGFAGIDS(0.002)S(0.13)S(0.868)PEVK;QQSHFAMMHGGT(0.141)GFAGIDS(0.244)S(0.244)S(0.371)PEVK;QQSHFAMMHGGTGFAGIDS(0.332)S(0.231)S(0.437)PEVK;QQSHFAMMHGGTGFAGIDS(0.007)S(0.19)S(0.803)PEVK;QQSHFAMMHGGTGFAGIDS(0.011)S(0.299)S(0.69)PEVK;QQSHFAMMHGGTGFAGIDSS(0.099)S(0.901)PEVK 151.99 1.2174e-32 1122551800.0 35040.4 37172.0 38839.799999999996 40639.7 48350.6 44527.8 42027.299999999996 48929.799999999996 45292.299999999996 45109.7 50543.0 True False 38597.67561262088 40304.614895145365 41475.7023906908 43149.9219695447 44954.62065651475 44165.18035994502 43626.67189972102 47953.85675431445 43388.822139215976 42261.46584353045 44326.53141847508 0.8707578594009626 0.9092661574315422 0.9356857183146058 0.9734558646643853 1.0141696004162843 0.9963599439575638 0.9842112726541385 1.0818319236755691 0.9788454171970633 0.9534124257219927 1.0 15.435882854591604 -5.930142142850235 1.2570834137099502 0.9984656686185764 0.870616709854083 0.6731210958336178 0.03047996368508785 0.24830587617352456 0.625615401474066 0.004142997234254487 0.02984416411076256 1.1745130785821786e-06 5.930142142850235 -0.12784895876449343 QQSLFSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 QQSLFSSPR 9 0 Q5T7B8-4;Q5T7B8-2;Q5T7B8 Q5T7B8-4 KIF24 Kinesin-like protein KIF24 1 QQS(0.001)LFS(0.245)S(0.754)PR 70.942 0.0033281999999999995 3991100.0 1555.1 1697.4 1638.1 2149.1 2274.7 1793.1 1878.3 1794.1 2896.9 2428.9 2438.1 True False 1817.5628614553116 1783.7904098184129 1870.407211925097 2675.6295964767646 1940.094643276868 1982.8446518365506 2219.56279689099 2048.419169200817 2240.7567753987087 1880.209803055687 1832.6524818631792 0.9917662401588944 0.9733380591637917 1.0206011398426909 1.4599765219844445 1.0586265876793275 1.0819534371408361 1.211120394541171 1.1177346438961941 1.2226850412581372 1.0259499941550065 1.0 10.83971752431771 -6.020639646716505 24.99045890467213 1.1335616901441434 0.9861564105836924 0.23913148660215122 0.12009425315463065 888.9119613222841 1076296.043842601 0.01758311255318126 0.04713708598987201 9.535870690971289e-07 6.020639646716505 -0.14740527956045102 QQSNEHLR ddPTM_A549_MK2206_60min_R1 2 QQSNEHLR 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 128.0 0.0011439 14178500.0 1169.24 1216.5 922.91 835.06 1044.17 751.5 784.98 1013.44 1393.1100000000001 1222.18 1674.57 False True 1366.5791268265752 1278.414653908389 1053.7925156936635 1039.649737487268 890.5739762036355 831.0232311946726 927.6007050542986 1157.0982235298336 1077.5728093395342 946.0886891591259 1258.7280532191567 1.085682585155382 1.015640074628419 0.8371883926783255 0.8259526232281844 0.7075189703812679 0.6602087155119466 0.7369349580173331 0.9192598993647532 0.8560807130528919 0.7516227883692068 1.0 10.297750908742875 -5.6273388221551075 4.218272331794469 0.8721313721918119 1.071110957361343 0.32709328797463855 0.10771022004260741 0.22919836655803644 7.096373843240947 0.017797527450638152 0.07845858851645984 2.358637384506104e-06 5.6273388221551075 0.19897958516953118 QQSNEHLR ddPTM_A549_PD325901_60min_R1 2 QQSNEHLR 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 125.16 0.0011853 13392500.0 2251.67 2257.95 1739.15 1832.3000000000002 2272.38 1904.63 1755.04 1729.96 1935.85 2339.63 2839.1000000000004 False True 2480.257880808155 2448.2353707762136 1857.179177358532 1945.4770095447757 2112.775868085421 1889.1193247580647 1821.829007594739 1695.4545906726341 1854.4929565997134 2191.9053625162464 2489.908698537731 0.9961240274652464 0.9832631100947631 0.7458824407694999 0.7813447178554426 0.8485354781587806 0.7587102795646696 0.7316850648638881 0.6809304259502919 0.7448035976936891 0.8803155568730309 1.0 11.281877126320179 -4.343028681676971 16.583655178482076 0.8458271015834314 0.8300528030000889 0.0 0.11225183297058791 0.0 0.0 0.01773504612648537 0.0 4.539116384270448e-05 4.343028681676971 -0.01577429858334256 QQSNEHLRR ddPTM_A549_MK2206_60min_R1 1 QQSNEHLRR 9 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 65.347 0.0059222 3055700.0 512.96 846.84 755.91 894.27 783.09 685.63 454.93 403.17 941.86 1124.6 1604.4 False True 599.5351073320793 889.9405388539088 863.1094045334834 1113.3661901453054 667.8984983530503 758.1829115156405 537.5848922906981 460.32058215634186 728.5302138413575 870.5520789313795 1205.9832008126343 0.49713387958314115 0.737937757552705 0.7156894092321432 0.9232020722967614 0.5538207314189755 0.6286844717279229 0.44576482651537297 0.38169734192496335 0.6040964860459482 0.7218608670044248 1.0 10.235994095487891 -10.53178678058142 0.9471406082245682 0.9893580677379604 0.6168453845581657 0.20304198549678043 0.16215006026118953 0.3772668082211227 0.629885958545561 0.0888720514706288 0.028106936260855687 2.939092262357424e-11 10.53178678058142 -0.3725126831797947 QQSSSSKGDS(ph)PELKPR ddPTM_A549_MK2206_60min_R1 1 QQSSSSKGDSPELKPR 16 2 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 QQS(0.014)S(0.014)S(0.01)S(0.053)KGDS(0.909)PELKPR 99.09200000000001 4.905699999999999e-07 17065000.0 2398.3 2770.7 2257.7 2829.8 3443.8 2831.2 2571.9 2384.0 4210.7 4676.2 4203.4 True False 2803.074407194568 2911.7167953834555 2577.875808780472 3523.101127034548 2937.221581974273 3130.79570480154 3039.1809387871695 2721.9393006938003 3256.9831731061995 3619.843172238053 3159.5797720617234 0.887166841609913 0.9215519168498381 0.8158919839831512 1.1150537037194714 0.9296241253176668 0.9908899064632887 0.9618940359287115 0.861487760100974 1.0308279607008997 1.1456723467614789 1.0 11.625516975634872 -2.0000000000013456 0.22709693481080204 1.0145146144077066 0.2434903947336169 0.23684315257456534 0.0846801184765024 49.39915717560465 0.5808633183779254 0.04201258354592293 14.309947657709392 0.009999999999969016 2.0000000000013456 -0.7710242196740897 QQSSSSKGDS(ph)PELKPR ddPTM_A549_PD325901_60min_R1 2 QQSSSSKGDSPELKPR 16 2 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 QQS(0.226)S(0.163)S(0.087)S(0.087)KGDS(0.436)PELKPR;QQS(0.006)S(0.006)S(0.006)S(0.006)KGDS(0.978)PELKPR 82.36 4.2051e-05 52619000.0 4986.8 5820.099999999999 5836.200000000001 5147.7 7479.3 5348.2 5681.2 6889.099999999999 6958.5 5757.1 5349.9 True False 5493.056264911868 6310.580252642729 6232.279627921607 5465.661737725061 6953.979770184253 5304.646032390062 5897.4011748719295 6751.691496105599 6666.058443835582 5393.595723487167 4691.8962158102995 1.1707540005684476 1.3449957037365712 1.3283072219118301 1.1649153106386714 1.4821256588650453 1.1305974788007835 1.2569334238467245 1.4390112623025206 1.4207599949404126 1.149555632819061 1.0 12.195955386137676 -10.895232825111545 1.1507017958327879 1.0002993855550881 1.3135621813106753 0.3352546446445068 0.11856098634112454 0.30985623801883105 0.7298043640751101 0.07676881279809929 0.01843857335757594 1.2728205394561862e-11 10.895232825111545 0.31326279575558713 QQSSSSRES(ph)PVPK ddPTM_A549_PD325901_60min_R1 1 QQSSSSRESPVPK 13 1 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QQSSSSRES(1)PVPK 131.48 1.0711999999999999e-08 98172000.0 6555.2 6296.4 5718.1 6491.7 8497.2 6634.5 6627.3 8227.8 6422.1 6184.3 6827.3 True False 7220.6790783168135 6827.019725217718 6106.164651728615 6892.6775652796005 7900.38598574862 6580.470831661468 6879.5055280977085 8063.690074415761 6152.201470454334 5793.822242580763 5987.58538182053 1.205941730741777 1.140195803461254 1.0198041885578977 1.1511614658902578 1.3194610985816961 1.0990191224063466 1.1489615745581219 1.3467348789544926 1.0274929004158524 0.9676391856009152 1.0 12.547758608212499 -8.96083101775891 24.951250521970348 1.0121290972304144 1.1733335440807453 0.45090468925869565 0.08836322058734736 105.49997773647175 67205.47475628443 0.015006377691290415 0.015949289461607025 1.0943821031275765e-09 8.96083101775891 0.16120444685033086 QQSTS(ph)SDRVSQTPESLDFLK ddPTM_A549_MK2206_60min_R1 1 QQSTSSDRVSQTPESLDFLK 20 1 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQS(0.066)T(0.066)S(0.434)S(0.434)DRVSQTPESLDFLK 103.29 4.2302e-10 37454000.0 3486.7 4267.1 3756.6 3388.5 5572.5 4242.8 4168.7 3809.0 5162.3 5018.3 5668.2 True False 4075.1697183693873 4484.277163742285 4289.342367570853 4218.682652115544 4752.792631846114 4691.770279857294 4926.098829473178 4348.937414573271 3993.047292499139 3884.662544639283 4260.629505638356 0.9564712709651149 1.0524916934945792 1.0067391125875882 0.9901547756106696 1.1155141806055766 1.1011918012698316 1.1561903758480208 1.0207264933076325 0.9371965544563055 0.9117578844859586 1.0 12.056850888251105 -8.532629468740893 15.024104708407414 0.9707942657595832 1.056401996253517 0.36309588821354155 0.0586063221410219 1.6211742376568747 2495.2680144189317 0.010107827761886089 0.011505090538198348 2.9333948910524724e-09 8.532629468740893 0.08560773049393378 QQSTS(ph)SDRVSQTPESLDFLKVPDQGAAGVR ddPTM_A549_PD325901_60min_R1 2 QQSTSSDRVSQTPESLDFLKVPDQGAAGVR 30 2 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQS(0.118)T(0.092)S(0.395)S(0.395)DRVSQTPESLDFLKVPDQGAAGVR;QQS(0.019)T(0.07)S(0.456)S(0.456)DRVSQTPESLDFLKVPDQGAAGVR 148.1 1.1053e-36 61502000.0 4026.5 4946.8 5561.7 5322.6 6581.299999999999 5806.6 6000.0 6333.700000000001 5445.700000000001 5322.5 5369.4 True False 4435.267315847365 5363.68419679611 5939.15040721901 5651.364913498348 6119.052192252438 5759.312974772092 6228.33328332598 6207.3693848084695 5216.836166931871 4986.436441656468 4708.997839430979 0.9418707476797886 1.1390288081857012 1.2612344727549671 1.200120515277459 1.2994383095728592 1.2230443018143389 1.3226451775307233 1.3181932964230345 1.1078442472936572 1.0589166977105713 1.0 12.201204345366436 -9.146840823988308 2.1820174135794295 1.0377278237977496 1.2178149861236982 0.31150009390140865 0.10380741247980045 0.22685512504018743 2.2333232890262003 0.021452276352159582 0.020364220925299076 7.131143502760179e-10 9.146840823988308 0.18008716232594857 QQSTSS(ph)DRVSQTPESLDFLK ddPTM_A549_PD325901_60min_R1 2 QQSTSSDRVSQTPESLDFLK 20 1 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQSTS(0.002)S(0.998)DRVSQTPESLDFLK;QQSTS(0.003)S(0.997)DRVSQTPESLDFLK 314.87 1.5293999999999996e-164 101115000.0 51090.0 66074.0 72425.0 61493.0 67155.0 56795.0 65248.0 80080.0 53154.0 71867.0 63188.0 True False 56276.61918952983 71642.28786672311 77340.19602690493 65291.28294926423 62438.26447217297 56332.48035032223 67731.04834507559 78482.74157845533 50920.122228014174 67329.30535510098 55416.276581734404 1.0155250886718543 1.2928022647111033 1.3956223838466406 1.1781968579748407 1.1267134553885394 1.016533116714121 1.2222230096094224 1.4162398923121406 0.9188658164882518 1.2149734610154808 1.0 15.758022158980706 -8.789942043263222 24.999977139097265 0.9616865877976976 1.2074553749193762 0.13811943005389415 0.14604474723969038 141.0743382270225 123737.09490258108 0.022085971779272115 0.0235143578150331 1.6220265428744302e-09 8.789942043263222 0.2457687871216786 QQSTSSDRVS(ph)QTPESLDFLKVPDQGAAGVR ddPTM_A549_MK2206_60min_R1 2 QQSTSSDRVSQTPESLDFLKVPDQGAAGVR 30 2 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQS(0.002)T(0.002)S(0.002)S(0.002)DRVS(0.992)QT(0.002)PESLDFLKVPDQGAAGVR;QQS(0.01)T(0.01)S(0.008)S(0.006)DRVS(0.967)QT(0.001)PESLDFLKVPDQGAAGVR 135.27 2.3457999999999997e-28 11984100.0 2407.1000000000004 3046.6 2331.68 2470.6 3753.8 2543.3999999999996 2361.3 2354.77 4488.6 4328.4 4825.8 True False 2813.359632055224 3201.6589269192746 2662.3472852093923 3075.8971109094487 3201.620992628791 2812.540899827718 2790.317644837723 2688.5658586806785 3471.9392668213104 3350.6114337956456 3627.4206746955956 0.7755812971130829 0.8826268619059326 0.7339505185548434 0.8479570986531829 0.8826164042574035 0.7753555906673933 0.769229128648521 0.7411784018974574 0.957137199730127 0.9236897879446587 1.0 11.824728350098257 -8.855375106731653 5.97967451330377 0.9811243713595077 0.8041539118387295 0.6448538754786391 0.05212353887257597 0.07755384936859705 4.069535859539651 0.008672620707688908 0.009203690134435949 1.395162817219753e-09 8.855375106731653 -0.17697045952077817 QQSTSSDRVS(ph)QTPESLDFLKVPDQGAAGVR ddPTM_A549_PD325901_60min_R1 1 QQSTSSDRVSQTPESLDFLKVPDQGAAGVR 30 2 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQS(0.042)T(0.042)S(0.042)S(0.046)DRVS(0.296)QT(0.253)PES(0.279)LDFLKVPDQGAAGVR 45.003 0.0092061 1700100.0 1217.1 1350.9 1396.2 860.59 1641.4 1184.2 1156.5 1231.8 1737.0 1335.7 1513.5 True False 1340.6590960183353 1464.7450839839616 1490.954528032648 913.7466897583021 1526.1137265225932 1174.5562678202582 1200.5112403610833 1207.2307826715933 1663.999930580211 1251.3636740480115 1327.3490948669858 1.0100275061043253 1.10351157027816 1.1232572755715462 0.6883996781945816 1.1497455585906176 0.8848887397915173 0.9044427310069376 0.9095051085958441 1.25362644764297 0.9427540041178174 1.0 10.374332136303789 -8.743202409884091 24.977299738701745 1.1197680655649056 0.9725193345966218 0.04235279004489667 0.14563394783612976 311.41425198923184 426511.8364438628 0.02488176083069571 0.028186976656268653 1.8063320598720682e-09 8.743202409884091 -0.14724873096828384 QQT(ph)PEKLPIPMIAK ddPTM_A549_PD325901_60min_R1 1 QQTPEKLPIPMIAK 14 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 QQT(1)PEKLPIPMIAK 40.693000000000005 0.029118 1894900.0 3255.7 2890.2 2864.9 2953.9 3899.3 3238.4 3313.5 3206.0 3548.1 3469.2 3462.8 True False 3586.2162672803333 3133.767297157783 3059.329342043216 3136.3556942063583 3625.426619854727 3212.0275440881 3439.597055716774 3142.053814941653 3398.985695850117 3250.1541199426224 3036.897552497785 1.1808815428530821 1.0318976004245928 1.0073864162875634 1.0327499166466023 1.1937928616896836 1.0576674018674994 1.132602268024411 1.0346262133068596 1.1192296207208312 1.0702218510036463 1.0 11.568382525733696 -10.93192509308217 1.1206306732656202 0.9987117076005542 1.0872406766370606 0.05600566776839189 0.06301518638889617 0.6226332830243696 1.3552391190873878 0.04395789049761046 0.0097240206471282 1.169701123148152e-11 10.93192509308217 0.08852896903650642 QQT(ph)QSALEQR ddPTM_A549_MK2206_60min_R1 1 QQTQSALEQR 10 0 Q86YS7;Q86YS7-3;H0YFE9;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 QQT(0.993)QS(0.007)ALEQR 91.62 0.00067524 4118300.0 1284.5 1254.0 1120.9 997.9 1283.7 1204.9 667.83 1426.0 1631.8 1992.9 1513.2 True False 1501.2921969901272 1317.823243732939 1279.8604748469813 1242.3855447974333 1094.8694305071076 1332.4017182521116 789.1660664684613 1628.1398669418456 1262.19990544914 1542.7025058708398 1137.430677804587 1.3198977540221157 1.1585965364293997 1.125220639658942 1.092273638333217 0.9625812384631395 1.1714135588674714 0.6938146489873748 1.4314189855371242 1.1096939181255216 1.3563046398998913 1.0 10.15156290572276 -5.057244685647009 1.0483863856239493 1.0589511566993763 1.540631113681479 0.06523892390563413 0.18840215345896782 3.195819583524351 2.0775025183026608 0.022713388879999002 1.8924264587544222 8.765068496962598e-06 5.057244685647009 0.48167995698210264 QQT(ph)QSALEQR ddPTM_A549_PD325901_60min_R1 2 QQTQSALEQR 10 0 Q86YS7;Q86YS7-3;H0YFE9;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 QQT(1)QSALEQR;QQT(0.986)QS(0.014)ALEQR 126.34 7.7727e-06 14128900.0 2721.0 3887.9 3082.1 2489.5 3360.6 2726.6000000000004 3538.2 3135.2 3040.5 3689.0 4170.6 True False 2997.233916905671 4215.546977586235 3291.2698401729194 2643.270760935282 3124.563049440618 2704.39547360135 3672.8481371773314 3072.66597648318 2912.7183586235683 3456.0759104313233 3657.6426396116603 0.8194441645135385 1.1525311226232338 0.8998336263168565 0.7226705890589474 0.8542559668356118 0.7393820938965436 1.004157185122734 0.8400672999616527 0.7963375992720868 0.9448916285594982 1.0 11.836698411896046 -5.9748651895893765 24.981177231408445 0.8771731343816644 0.9960363859183663 0.13656096223802439 0.11392438815998973 334.8422425308081 332791.6424997858 0.01627553423877733 0.05060028441295698 1.0595825817506391e-06 5.9748651895893765 0.11886325153670185 QQTEKPES(ph)EDEWER ddPTM_A549_MK2206_60min_R1 4 QQTEKPESEDEWER 14 1 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER 240.2 1.496e-57 674368000.0 27525.0 24881.6 15573.5 15357.6 37977.399999999994 30060.7 27458.9 27608.8 39461.399999999994 37108.1 36894.4 True False 32170.547078359847 26147.9671620937 17782.056476964473 19120.212689428852 32390.97476835756 33241.70332132231 32447.826696241314 31522.43194840392 30523.455906906893 28725.35443730528 27732.50224636105 1.1600304506450059 0.9428636092700482 0.6411991359091214 0.6894514068573718 1.167978802655926 1.198655030333015 1.1700288134114905 1.136660214371394 1.1006383641747315 1.0358010316604052 1.0 14.759290173191566 -6.772940209899847 24.989235603544316 1.0834000648841917 0.8489068787354405 0.4285527283071219 0.13963956056506352 180.27132736820138 391697.5428484271 0.021606871516011303 0.041080639549966304 1.686785232152071e-07 6.772940209899847 -0.23449318614875125 QQTEKPES(ph)EDEWER ddPTM_A549_PD325901_60min_R1 4 QQTEKPESEDEWER 14 1 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER 241.8 1.1930999999999998e-57 852263000.0 51618.0 48904.5 42180.2 38860.4 39701.6 36608.2 38064.3 33709.2 55267.5 50122.200000000004 58660.5 True False 56858.221360836775 53025.85384535769 45042.8020221478 41260.71864962819 36913.09657908457 36310.07495661004 39512.85776608417 33036.843561644164 52944.79917290841 46957.47573809184 51445.63037954725 1.105209926311669 1.030716378711897 0.875541842715082 0.8020257181265257 0.7175166541211198 0.7057951217377928 0.7680508038208999 0.642170060273541 1.0291408382461413 0.9127592643273408 1.0 15.650760924161952 -8.816138419845483 24.999980204277698 1.0137611683466945 0.8280236090805757 0.18805341198306202 0.13374595724741817 87.54213053370208 40010.30681898172 0.02436002310604839 0.025933227327166478 1.5270792646594743e-09 8.816138419845483 -0.1857375592661188 QQTEKPES(ph)EDEWERTER ddPTM_A549_MK2206_60min_R1 3 QQTEKPESEDEWERTER 17 2 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 QQTEKPES(0.996)EDEWERT(0.004)ER;QQTEKPES(1)EDEWERTER;QQT(0.003)EKPES(0.997)EDEWERTER 106.35 2.1898e-09 67461000.0 7299.0 8355.5 7990.799999999999 6437.1 9355.1 7213.4 7068.2 5928.2 11083.199999999999 15253.3 14971.1 True False 8530.892756583056 8780.759260773977 9124.015596759082 8014.1897889724005 7978.977182626036 7976.717200132607 8352.400447737264 6768.5405043510855 8572.872896233548 11807.568936123069 11253.362688659956 0.7580749854600937 0.7802787045708899 0.810781261493809 0.7121595571649283 0.7090304830098894 0.7088296557055578 0.742213743466564 0.6014682625640212 0.7618054383755405 1.0492480570293525 1.0 13.458068546267548 -10.304216232947827 0.80671830529627 0.9932945233045429 0.7311015002073576 0.7939448979411794 0.05649685765910868 0.2217486817214596 0.2736395297123992 0.0323043147701968 0.011233595870128746 4.9634513227670156e-11 10.304216232947827 -0.2621930230971853 QQTEKPES(ph)EDEWERTER ddPTM_A549_PD325901_60min_R1 4 QQTEKPESEDEWERTER 17 2 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 QQTEKPES(1)EDEWERTER;QQT(0.003)EKPES(0.977)EDEWERT(0.02)ER;QQTEKPES(1)EDEWERTER;QQTEKPES(1)EDEWERTER 171.06 2.561e-30 230382000.0 20668.9 21987.5 21539.2 20864.6 21863.5 26921.300000000003 22545.7 24871.3 29334.1 27277.5 30416.8 True False 22767.191512360034 23840.463790137965 23000.97963773158 22153.358955055326 20327.883184980346 26702.061858528563 23403.688950980428 24375.222410342594 28101.289789080583 25555.193994792728 26675.726427981564 0.8534797196179946 0.8937137608792709 0.8622437968026486 0.83046881646745 0.7620367242804442 1.0009872432384588 0.8773402671588008 0.9137603984712539 1.0534404701198192 0.957994304814378 1.0 14.703239938313368 -8.348442831159506 1.2604650495377385 1.0254806095435691 0.8584699418062736 0.4707430492473176 0.05978837647311703 0.2041524130499384 0.6293000643161912 0.010885493124860963 0.013726470875847881 4.482880570132328e-09 8.348442831159506 -0.16701066773729556 QQTVLSRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 QQTVLSRTPR 10 1 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 QQTVLS(0.005)RT(0.995)PR;QQTVLS(0.002)RT(0.998)PR 111.72 6.0636999999999996e-05 43516000.0 6915.4 6408.1 7361.6 6138.5 7929.1 6071.5 6571.0 7097.6 7230.4 7509.099999999999 7638.299999999999 True False 7617.446317151586 6948.133076228906 7861.2024448969705 6517.6612034550035 7372.187369910018 6022.055716999406 6821.063000789173 6956.032800040514 6926.531432393298 7034.974144488974 6698.837523173102 1.1371295826777057 1.0372147484087235 1.1735174077148358 0.972954065673132 1.1005174172992873 0.8989702610590982 1.0182457743143134 1.0383940162718834 1.0339900629672747 1.050178351117352 1.0 12.709695045148633 -6.270811411106278 24.989963812520926 1.0134855929508777 1.1080799984022933 0.38997707608764054 0.05646452529567709 460.4993507831974 1227893.7815493427 0.007040607383414727 0.01656148456271874 5.360293734361608e-07 6.270811411106278 0.09459440545141562 QQVAFYGQTLGQAQAHS(ph)QEQ ddPTM_A549_MK2206_60min_R1 2 QQVAFYGQTLGQAQAHSQEQ 20 0 Q96I24-2;Q96I24 Q96I24-2 FUBP3 Far upstream element-binding protein 3 1 QQVAFYGQTLGQAQAHS(1)QEQ;QQVAFYGQTLGQAQAHS(1)QEQ 208.47 2.606499999999999e-66 9087100.0 1102.5700000000002 1102.19 1435.22 1425.13 1518.59 796.84 880.99 1035.34 1578.72 1235.51 1524.48 True False 1288.6568607515803 1158.2867631658748 1638.755777241399 1774.2869139765162 1295.207422664009 881.161079900417 1041.054479280729 1182.1026155957704 1221.142440697798 956.407432901039 1145.9095424924249 1.1245711925469013 1.0108012196551996 1.430091745005459 1.5483655979662507 1.130287666377969 0.7689621625663721 0.9084962125512722 1.031584581296551 1.0656534354725216 0.8346273396247256 1.0 10.162277447650135 -6.997319012539424 24.951641637235177 1.0029644216902587 1.2788147347296255 0.4731042072443379 0.16179144911381987 66.23995754036717 616472.7913099399 0.023307626723009206 0.04386829196634952 1.0061922952402987e-07 6.997319012539424 0.2758503130393668 QQVAFYGQTLGQAQAHS(ph)QEQ ddPTM_A549_PD325901_60min_R1 2 QQVAFYGQTLGQAQAHSQEQ 20 0 Q96I24-2;Q96I24 Q96I24-2 FUBP3 Far upstream element-binding protein 3 1 QQVAFYGQTLGQAQAHS(1)QEQ;QQVAFYGQTLGQAQAHS(1)QEQ 255.69 1.4342999999999998e-97 17318800.0 1588.58 2598.3999999999996 2083.14 1645.72 2827.3 1771.4299999999998 2423.6 2778.1 2279.3 1945.8000000000002 2383.7 True False 1749.8514721492131 2817.3762870855912 2224.5144073384417 1747.3723866986993 2628.720201655494 1757.004061395744 2515.8314242448073 2722.6886161227094 2183.5089474792608 1822.9418559276944 2090.5200115192815 0.8370412445262898 1.3476916133599066 1.064096203375628 0.8358553742945516 1.2574479972306394 0.8404626847455263 1.2034476639218734 1.3023977771655009 1.0444812465068918 0.8720040209530808 1.0 11.029646138319883 -8.987763755042627 23.375536506046878 1.0196237922873763 1.092537487514412 0.05622869729137292 0.1824910590658986 90.65912148002752 173199.00900307694 0.029563655172674504 0.029720930266904415 1.0285756645112792e-09 8.987763755042627 0.07291369522703572 QRADS(ph)RESLKPAAK ddPTM_A549_MK2206_60min_R1 3 QRADSRESLKPAAK 14 3 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QRADS(0.92)RES(0.08)LKPAAK;QRADS(0.987)RES(0.013)LKPAAK;QRADS(0.999)RES(0.001)LKPAAK 97.095 7.648099999999999e-06 70116000.0 4663.9 6354.3 5928.799999999999 5072.7 7147.5 5334.4 5068.7 4632.3 8056.3 8916.2 8456.0 True False 5451.052298592645 6677.70672859028 6769.592990697459 6315.511727722159 6096.112218235999 5898.882667311859 5989.617179684486 5288.942710823777 6231.5609132675 6902.024227430163 6356.141826272523 0.8576039439619213 1.0505912094328353 1.0650475045594443 0.9936077419823417 0.959090024240536 0.9280602649439593 0.9423353574218496 0.8320995433050947 0.9803999161110473 1.0858826653145601 1.0 12.633935600943428 -5.236676301125785 23.49320196138715 0.9793739646483148 0.857603605852458 0.22033864061608288 0.06775033843606919 3651.4544000186593 3464082.5884619984 0.008518291290060204 0.7005998284456151 5.7986073123377765e-06 5.236676301125785 -0.12177035879585685 QRADS(ph)RESLKPAAK ddPTM_A549_PD325901_60min_R1 4 QRADSRESLKPAAK 14 3 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QRADS(0.991)RES(0.009)LKPAAK;QRADS(0.999)RES(0.001)LKPAAK;QRADS(0.996)RES(0.004)LKPAAK;QRADS(1)RESLKPAAK 135.18 9.0041e-10 234743000.0 11082.4 10994.599999999999 10487.2 10730.9 11320.2 10073.7 12758.3 13078.3 10966.9 13542.8 12247.800000000001 True False 12207.477089568318 11921.153527552055 11198.92445665664 11393.723321357871 10525.108204569919 9991.663127124593 13243.824088109646 12817.443046772123 10505.999331422063 12687.705296771299 10741.398245201097 1.1364886405754686 1.1098325614058704 1.0425946604912402 1.060729996343652 0.9798638840406267 0.9302013480031373 1.2329702135405463 1.1932750982860667 0.9780848909606156 1.1811968057733775 1.0 13.390894185732757 -2.000000000016261 0.062058940325402996 0.8755951878203919 1.4414959811709145 0.0 0.10731539676369382 416.8661438033343 1.8749963975460608 3.311365396873666 21.070011897937558 0.009999999999625572 2.000000000016261 0.5659007933505226 QRAS(ph)LSSAPVVLVGDHA ddPTM_A549_MK2206_60min_R1 1 QRASLSSAPVVLVGDHA 17 1 Q9HBH9 Q9HBH9 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 1 QRAS(0.929)LS(0.036)S(0.036)APVVLVGDHA 83.936 3.5187e-05 4129600.0 461.69 377.96 418.04 272.8 413.5 594.65 441.74 576.91 741.72 670.99 617.7 True False 539.6119847632323 397.1965496023137 477.3243580203692 339.63601224645726 352.674697760138 657.5754683032762 521.9984400248234 658.688759212777 573.7216042834517 519.412892977206 464.30804234727304 1.1621853070544848 0.8554591206181086 1.02803379327072 0.7314885405160202 0.7595705126648649 1.4162482841756407 1.1242502658060822 1.4186460262088665 1.235648646926396 1.1186816630428253 1.0 8.858938460026794 -7.244832844312303 24.995221407248177 1.1596251253530858 0.9013996322578903 0.4461303728920841 0.1657698391433388 764.4493921185664 1150606.5795080513 0.026464393465262595 0.04575688859509166 5.690719188996236e-08 7.244832844312303 -0.2582254930951955 QRAS(ph)QDT(ph)EDEESGASGSDSGGSPLR ddPTM_A549_MK2206_60min_R1 1 QRASQDTEDEESGASGSDSGGSPLR 25 1 O15234 O15234 CASC3 Protein CASC3 2 QRAS(0.998)QDT(0.995)EDEES(0.006)GAS(0.001)GSDSGGSPLR 50.464 0.0044448 2690400.0 574.61 300.68 375.09 417.09 567.17 274.02 253.09 512.1 436.17 564.58 444.42 True False 671.5901201342907 315.98332769188187 428.2834021860594 519.2770687238814 483.74004432555597 303.016614520245 299.0731769499766 584.6917432404761 337.37819142036494 437.04098588216084 334.0582486319814 2.010398255048492 0.9458929063595374 1.2820620473822877 1.5544506709545378 1.4480709466284516 0.9070771811836512 0.895272540566581 1.7502688397453927 1.0099382152722742 1.3082777859008397 1.0 8.383955872371114 -2.0000000000045937 0.18262248123751068 0.9549719052609361 3.66505230284197 0.12286196612201772 0.3351874893501311 55.1852326302423 0.5842784082608546 0.31650077587641906 42.14678451097704 0.009999999999894227 2.0000000000045937 2.710080397581034 QRASLS(ph)SAPVVLVGDHA ddPTM_A549_MK2206_60min_R1 1 QRASLSSAPVVLVGDHA 17 1 Q9HBH9 Q9HBH9 MKNK2 MAP kinase-interacting serine/threonine-protein kinase 2 1 QRAS(0.274)LS(0.363)S(0.363)APVVLVGDHA 81.96700000000001 5.7908e-05 3084700.0 376.7 418.83 434.64 369.18 573.22 307.28 282.31 263.16 466.39 684.91 689.45 True False 440.27775056923383 440.1466580324295 496.27848763269856 459.6291165731198 488.9000973399421 339.7961656440441 333.6020727201703 300.46373589369995 360.75340967178863 530.1883553093464 518.2405371480123 0.8495625467513132 0.8493095898183689 0.9576218995986389 0.8869030568364188 0.9433845141301819 0.6556726872699201 0.6437205289961556 0.5797765986181159 0.6961119090704313 1.0230545804600417 1.0 9.017478058351529 -7.167895567435772 22.20178587124645 0.7997697942057241 0.8974545128162107 0.16380629721292228 0.13640174987939782 47.974115731542604 11379.553285206515 0.024100704834809788 0.041743648211772975 6.793669768659163e-08 7.167895567435772 0.09768471861048655 QRDEKDEHGR ddPTM_A549_MK2206_60min_R1 2 QRDEKDEHGR 10 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ; 76.143 0.00049778 19626200.0 1947.72 1728.26 1377.24 1001.44 831.24 930.82 698.77 783.1099999999999 1054.4 2444.6 2039.0300000000002 False True 2276.447518817913 1816.2210520046963 1572.5533414026736 1246.79284495635 708.9656971369694 1029.3187545716908 825.7274639746142 894.1182406737925 815.5800835308087 1892.3631621515638 1532.6825766348716 1.4852700445098277 1.184994910030462 1.0260137130646723 0.8134710108689202 0.4625652486332564 0.6715798628256369 0.5387465588521047 0.5833681770147745 0.5321258921866787 1.2346738920373193 1.0 10.581843225929884 -5.775251682658928 1.4078412256525954 0.7138618032765212 1.4890092357654001 0.5550895819970888 0.21721081491544758 0.3099091448133665 0.9588861968516618 0.03061290128627603 0.2591069029699086 1.6778313982319098e-06 5.775251682658928 0.775147432488879 QRDEKDEHGR ddPTM_A549_PD325901_60min_R1 2 QRDEKDEHGR 10 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ; 67.77600000000001 0.0014718 24015000.0 1297.87 1575.24 1560.3 1016.1500000000001 1747.42 1248.98 1018.16 1283.67 995.7900000000001 1818.05 1879.9099999999999 False True 1429.6288069586044 1707.9910031052611 1666.1913408461116 1078.9152776559094 1624.6872474717375 1238.8087209779999 1056.90663595853 1258.0661948303657 953.9404092530044 1703.2580127296453 1648.6929877313478 0.8671285785753341 1.0359666813743833 1.0106134697272184 0.6544064211375885 0.9854395327460919 0.7513883604749474 0.6410572761717547 0.7630688091671352 0.5786040314065117 1.03309592835315 1.0 10.687107056199938 -6.241731543405424 24.468902026401025 0.7846769217445173 0.9777093153510971 0.19846500125217004 0.14976480447539509 785.9195719252227 975781.6452384028 0.023522608157346695 0.06213274709510653 5.73150210958984e-07 6.241731543405424 0.19303239360657976 QREEKS(ph)PDDLK ddPTM_A549_MK2206_60min_R1 4 QREEKSPDDLK 11 2 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 QREEKS(1)PDDLK;QREEKS(1)PDDLK;QREEKS(1)PDDLK;QREEKS(1)PDDLK 110.35 2.7981e-05 129285000.0 22210.8 19750.8 18768.7 16818.1 23732.300000000003 19646.699999999997 18444.0 18404.4 25086.4 27897.0 32128.7 True False 25959.44003807575 20756.03135751239 21430.38388282678 20938.535254993185 20241.310107987712 21725.700753576028 21795.036056996985 21013.280061111138 19404.370454748943 21595.048324692056 24150.257082989843 1.0749136106033506 0.8594538470620189 0.8873770498253288 0.8670108638197966 0.8381405646503289 0.8996053615047624 0.9024763579990314 0.870105853900486 0.8034850473047904 0.8941953806323022 1.0 14.559750926390226 -11.06364110008155 1.394322358882011 0.9995877607665782 0.8761496594540296 0.0 0.07259943966141355 0.4071164119164119 1.4200372998792026 0.046386780562553846 0.010428971745780788 8.636920059289606e-12 11.06364110008155 -0.12343810131254862 QREEKS(ph)PDDLK ddPTM_A549_PD325901_60min_R1 4 QREEKSPDDLK 11 2 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 QREEKS(1)PDDLK;QREEKS(1)PDDLK;QREEKS(1)PDDLK;QREEKS(1)PDDLK 135.89 8.8738e-09 219639000.0 35068.7 36002.3 35842.5 31416.9 44833.0 30580.8 36136.7 36962.100000000006 36987.7 39254.8 40539.1 True False 38628.84860778753 39036.34017108283 38274.9875884617 33357.450560043224 41684.08474545354 30331.760103831934 37511.90189326101 36224.861919293486 35433.235597191546 36776.24522873394 35553.047698528055 1.0865130026359686 1.0979745112737267 1.0765599594446678 0.9382444746480698 1.1724475802725436 0.8531409279179099 1.0550966603859973 1.0188961077672463 0.9966300469553987 1.034404857231312 1.0 15.117685616218061 -6.0402686066531235 0.9543869596976812 1.0000084489340664 1.1102001942566524 0.15011849889367523 0.07497600973560875 0.9654144425798039 1.2738253465164115 0.010185967959082142 0.08251186375239601 9.114469444675095e-07 6.0402686066531235 0.11019174532258602 QREEKS(ph)PDDLKK ddPTM_A549_MK2206_60min_R1 3 QREEKSPDDLKK 12 3 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK 91.45700000000001 7.9452e-05 269916000.0 19369.0 20952.4 19711.4 17276.4 25197.7 19670.1 17913.8 20313.600000000002 25649.8 25515.699999999997 25435.1 True False 22638.01367341516 22018.787665063828 22506.772918100436 21509.11877556707 21491.151709191352 21751.576926044363 21168.50558001695 23193.11500779094 19840.161254313865 19751.68564857673 19118.862696951783 1.1840669621537925 1.151678738117325 1.177202497598814 1.1250208297691462 1.124081073745971 1.1377024497127817 1.1072052723822297 1.2131011857461969 1.037727064041162 1.0330994035396175 1.0 14.222709085385455 -8.88541592645586 6.16390225919296 1.0164729101396472 1.1492278025905354 0.7869289272928441 0.02991825671306721 0.06333577765930512 3.189372414669247 0.005253408326967245 0.005566886649534264 1.3019193251773626e-09 8.88541592645586 0.13275489245088812 QREEKS(ph)PDDLKK ddPTM_A549_PD325901_60min_R1 8 QREEKSPDDLKK 12 3 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK 130.21 1.2949999999999999e-08 609337000.0 64596.8 68856.8 70937.70000000001 57237.9 80106.99999999999 58613.0 71679.0 74421.20000000001 70453.5 76197.59999999999 71144.2 True False 71154.61958234923 74659.60418896069 75751.95890504331 60773.35508629748 74480.56067414726 58135.675161078194 74406.78356925384 72936.81078369793 67492.5844036459 71386.47053203614 62393.914420241614 1.1404096095510479 1.1965847131517666 1.214092105118318 0.9740269648249799 1.193715146199972 0.9317523303557634 1.1925327054831336 1.1689731516514057 1.081717424379936 1.1441255320387014 1.0 15.929117702484977 -14.999999998798431 0.08019458454155091 0.5786260739589184 1.2459518146607875 0.0 0.09754179496683256 161.3348479903551 0.9564007447604449 11.971619202809242 1.2253039183285435 1.000000002766714e-15 14.999999998798431 0.6673257407018691 QREES(ph)ET(ph)RSESSDFEVVPK ddPTM_A549_MK2206_60min_R1 1 QREESETRSESSDFEVVPK 19 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 2 QREES(0.731)ET(0.355)RS(0.331)ES(0.302)S(0.282)DFEVVPK 45.395 0.017297999999999997 3790500.0 756.15 836.56 485.72 678.18 1231.8 898.61 651.63 890.75 1189.1 842.65 949.43 True False 883.7696339074233 879.1373307633389 554.6023997169025 844.3341304446569 1050.6038517555924 993.7003137509583 770.0227361646571 1017.016540307467 919.7707486025076 652.2947797541584 713.6603280650339 1.2383617235717883 1.231870816116355 0.7771237630941468 1.1831036380205164 1.472134305971753 1.392399541733256 1.0789765184964675 1.425070863985015 1.288807451433242 0.9140129471996047 1.0 9.479093765965494 -4.24125339461067 12.663689467262932 1.178769663024931 1.186381448818737 0.0 0.20980416764602788 0.0 0.0 0.027202580870185976 0.0 5.737815843969056e-05 4.24125339461067 0.0076117857938060585 QREES(ph)ETRSES(ph)SDFEVVPK ddPTM_A549_MK2206_60min_R1 1 QREESETRSESSDFEVVPK 19 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 2 QREES(0.868)ET(0.074)RS(0.064)ES(0.531)S(0.463)DFEVVPK 79.445 0.00024454 8154300.0 1685.3 2001.5 1678.7 1936.4 2806.6 2241.9 1887.6 2154.2 3783.8 2518.9 2853.5 True False 1969.7374383709314 2103.367800902295 1916.764902422722 2410.818086928298 2393.752857880538 2479.136369947222 2230.55248650984 2459.5644469608146 2926.7753414869817 1949.8787405479743 2144.8971974064166 0.9183365248239933 0.9806380480358974 0.8936395202252353 1.1239783845321023 1.116022185480514 1.155829926462193 1.0399344496356266 1.146705049517007 1.3645294259445173 0.9090779469084783 1.0 11.066692787237196 -6.352137057388024 4.402830109889623 1.1579636875466004 0.9359999772687816 0.24039637567237027 0.11677802141568039 0.19309964176554642 6.566074069252634 0.01895543570734445 0.04593260656045687 4.4449097007232153e-07 6.352137057388024 -0.2219637102778188 QREES(ph)ETRSESS(ph)DFEVVPK ddPTM_A549_MK2206_60min_R1 1 QREESETRSESSDFEVVPK 19 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 2 QREES(0.625)ET(0.118)RS(0.5)ES(0.356)S(0.401)DFEVVPK 68.895 0.0011187999999999999 8545100.0 1645.3 2144.0 1450.3 1406.9 3303.6 2885.7 2137.1 2003.7 3761.7 3012.4 3079.6 True False 1922.986416277039 2253.120442235582 1655.9743479976603 1751.590563158141 2817.644816252457 3191.0628586273688 2525.383406929529 2287.7306110738964 2909.680956200534 2331.896747797338 2314.85032736387 0.8307173874463487 0.9733330987327438 0.7153699435433775 0.7566755148065388 1.217203886983555 1.3785180065016651 1.0909488950870583 0.9882844622957299 1.2569628894815208 1.007363940653943 1.0 11.176703199983205 -6.7598289868205 24.999825881692647 1.1366913350164283 0.8226421748150026 0.5873130742389079 0.1270600139075287 25.945300789079567 402763.0285831707 0.020181991773272026 0.04033383222583788 1.7384852614951686e-07 6.7598289868205 -0.3140491602014257 QREES(ph)ETRSESSDFEVVPK ddPTM_A549_MK2206_60min_R1 4 QREESETRSESSDFEVVPK 19 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 QREES(0.783)ET(0.167)RS(0.036)ES(0.007)S(0.007)DFEVVPK;QREES(0.537)ET(0.177)RS(0.177)ES(0.055)S(0.055)DFEVVPK;QREES(0.536)ET(0.161)RS(0.204)ES(0.049)S(0.049)DFEVVPK;QREES(0.486)ET(0.486)RS(0.018)ES(0.005)S(0.005)DFEVVPK 136.62 2.1579000000000002e-17 76735000.0 26563.1 29809.5 30406.8 26837.3 35997.9 27234.699999999997 25448.6 24557.100000000002 37148.7 38247.6 37690.700000000004 True False 31046.301874556993 31326.676223330986 34718.94146362495 33412.43970477219 30702.656596129793 30116.657877069258 30072.281207985983 28038.144127964635 28734.578764283902 29607.440595888133 28331.058979599085 1.0958397953607426 1.1057361550053253 1.2254727749014152 1.1793572463645694 1.083710164813764 1.0630261967530392 1.0614598356397738 0.9896609988406937 1.014243018059275 1.045052379341279 1.0 14.79009690841203 -7.426800999230692 1.2149527830706717 1.0064175727118103 1.1510444053506228 0.6828090302913976 0.03897319825273616 0.16970487726894637 0.4971740045932692 0.0063746205501730374 0.012279998134268109 3.742820510865453e-08 7.426800999230692 0.14462683263881249 QREES(ph)YSR ddPTM_A549_MK2206_60min_R1 1 QREESYSR 8 1 P23246;P23246-2;H0Y9U2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 QREES(0.992)YS(0.008)R 78.488 0.001191 5261400.0 607.28 710.52 634.74 668.26 783.56 756.53 619.49 708.06 872.02 1006.9 1157.8 True False 709.7740174294777 746.6824331237061 724.7556765138492 831.9837299993317 668.2993619756555 836.5855024560295 732.0433141915561 808.4296733428066 674.5088623297951 779.4405906775794 870.2863063455922 0.8155638118791969 0.8579733217440713 0.8327784445525304 0.9559885338112508 0.7679074772322946 0.9612761873376185 0.8411522838564123 0.9289238121388731 0.7750424859172109 0.8956139893209606 1.0 9.765346285902261 -11.035375516293836 1.3251942288586218 1.0001357762141587 0.8533176073680473 0.13545275165425696 0.06933560076081062 0.33448226720422247 1.0452370176100063 0.043859007513069696 0.009800275912146593 9.21774062959832e-12 11.035375516293836 -0.14681816884611143 QREES(ph)YSR ddPTM_A549_PD325901_60min_R1 1 QREESYSR 8 1 P23246;P23246-2;H0Y9U2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 QREES(0.938)Y(0.014)S(0.048)R 43.297 0.058732000000000006 4099500.0 256.81 342.66 387.31 381.6 394.2 267.2 370.64 457.54 331.36 364.92 281.89 True False 282.8811621464703 371.53716076537484 413.59518568423226 405.1705653235201 366.5127519161732 265.0240117898777 384.74490802199017 448.41400576681355 317.4340915354398 341.8788889223631 247.2193170479383 1.144251855091149 1.5028646029846044 1.672988950147581 1.6389114336277917 1.482540912630637 1.0720198362917042 1.5562898264433935 1.813830776338006 1.2840181557248058 1.3828971498051237 1.0 7.949647665704909 -9.532209482533094 1.145944318004125 1.0604253095550944 1.482121415325827 0.13204102904027415 0.23322198153017618 0.3032525078664442 0.824937931913187 0.05841207361139298 0.043245747929711996 2.9362330143487436e-10 9.532209482533094 0.4216961057707327 QREESET(ph)RSES(ph)S(ph)DFEVVPK ddPTM_A549_PD325901_60min_R1 1 QREESETRSESSDFEVVPK 19 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 3 QREES(0.312)ET(0.539)RS(0.167)ES(0.993)S(0.99)DFEVVPK 81.312 9.1106e-05 12606000.0 3710.5 4270.7 4814.0 3783.4 4699.4 3461.2 3911.0 4358.3 4235.8 3995.2 4136.4 True False 4087.1872284742717 4630.606877022953 5140.706988933656 4017.092025275172 4369.330356049884 3433.0131347572037 4059.8352451813203 4271.370287479791 4057.784056391284 3742.942390174904 3627.6490227999993 1.1266765893795254 1.2764759897992615 1.4170905058962413 1.10735410179637 1.2044523405071361 0.9463465492886723 1.1191367245466701 1.1774486066965033 1.1185712925610662 1.0317818418072637 1.0 11.824819165677338 -2.000002476473778 0.0754632400416264 0.8509920505481051 1.9330658354385524 0.3285969902019419 0.10242915317235583 144.65380705150653 0.7778692026780283 1.7682463432429205 16.434536710973624 0.009999942977246535 2.000002476473778 1.0820737848904471 QREESETRS(ph)ESSDFEVVPK ddPTM_A549_MK2206_60min_R1 1 QREESETRSESSDFEVVPK 19 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 QREES(0.015)ET(0.192)RS(0.727)ES(0.052)S(0.015)DFEVVPK 70.994 0.00031747 5859300.0 2572.5 3499.7 2693.3 2236.9 3682.0 3306.7 2353.9 2341.3 3883.2 3382.8 4064.6 True False 3006.6751084134694 3677.8197815726985 3075.2504388485827 2784.940600418258 3140.382677515905 3656.612799190184 2781.5731606248746 2673.186444930534 3003.6614001961652 2618.6231305433653 3055.2476427468446 0.9841019321465851 1.2037714161416144 1.0065470293870367 0.9115269614984254 1.0278651830306362 1.1968302497085563 0.910424779224796 0.8749491882521132 0.9831155282377371 0.8570903038776495 1.0 11.577073606926398 QREESYS(ph)R ddPTM_A549_MK2206_60min_R1 1 QREESYSR 8 1 P23246;P23246-2;H0Y9U2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 QREES(0.033)Y(0.001)S(0.966)R 40.727 0.026764999999999997 6096000.0 417.45 799.45 680.61 613.37 966.41 739.04 454.24 692.09 979.51 934.47 1130.6 True False 487.90535432738693 840.1385902729644 777.1307322558692 763.6456775352256 824.2523691955859 817.2447222649513 536.7695282222031 790.1958769367336 757.6525489560532 723.3725779823993 849.8408170274032 0.5741138158484737 0.9885834775642155 0.9144427011333001 0.8985749592568719 0.9698903049616735 0.9616444702238857 0.6316118471453637 0.929816338665284 0.8915228990838442 0.8511859674057926 1.0 9.7310488263288 -14.999999946677319 0.1810445825425784 1.5638325381636773 0.8439342217746258 0.0 0.13657481141866193 77.53126980973475 0.8640987614988352 15.365928141213379 0.13856349854752784 1.0000001227800189e-15 14.999999946677319 -0.7198983163890514 QREESYS(ph)R ddPTM_A549_PD325901_60min_R1 1 QREESYSR 8 1 P23246;P23246-2;H0Y9U2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 QREES(0.01)YS(0.99)R 52.6 0.0074694 5418400.0 951.08 795.7 910.94 858.08 893.8 750.09 878.98 1088.1 1166.2 1329.2 967.96 True False 1047.6329414519098 862.7564315093927 972.7618663272183 911.0816527589259 831.0225714426062 743.9815157315464 912.4300648963115 1066.3969919020635 1117.1886695697435 1245.2740851573083 848.9070564039954 1.234096163471329 1.0163143597416469 1.1458991405347445 1.073240758085231 0.9789323403233935 0.8763992596351857 1.0748291677081847 1.256199938329367 1.3160317859792565 1.4669145176296916 1.0 9.729462797021553 -8.020873101051892 24.051750391064452 1.161623843749709 1.0475108905991397 0.22164780793976557 0.1452968378313827 780.8668358638685 899779.8566893057 0.023084405201117503 0.029986265118315338 9.530746075734809e-09 8.020873101051892 -0.11411295315056935 QREESYSR ddPTM_A549_MK2206_60min_R1 2 QREESYSR 8 1 P23246;P23246-2;H0Y9U2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 97.635 0.0024812 10918300.0 1445.3000000000002 1822.4299999999998 1716.94 1543.99 1937.12 1261.49 1368.6799999999998 1247.19 2263.8999999999996 2164.65 2481.3999999999996 False True 1689.2313058075758 1915.1839027721037 1960.4279094332917 1922.2676193123452 1652.1722140873467 1394.9800344907094 1617.3514395191185 1423.9830018591867 1751.1302647054215 1675.6540615852841 1865.1998968439734 0.9056569800726739 1.0267982032449745 1.0510551243062203 1.0305960356125548 0.8857882830054398 0.7478984085572258 0.8671196273685041 0.7634479308457226 0.9388432133566142 0.8983777365742879 1.0 10.865114539663399 -4.894606788957616 13.044785093247793 0.9438736540933103 3.238174789747766e-05 0.0 0.10061415993362417 2384750.4794349917 4719559.508414691 0.014858576080821403 63833616.86662187 1.2746566352425327e-05 4.894606788957616 -0.9438412723454128 QREESYSR ddPTM_A549_PD325901_60min_R1 2 QREESYSR 8 1 P23246;P23246-2;H0Y9U2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 78.516 0.004312 8415600.0 1853.76 1671.45 1598.73 1436.23 1809.91 1705.5300000000002 1828.8000000000002 2234.8 2534.71 2078.75 2801.3 False True 2041.952350534015 1812.308957454286 1707.2294317444755 1524.9426651850079 1682.7881654505359 1691.6407291466703 1898.395984757759 2190.225160833315 2428.1849533914615 1947.4973702383047 2456.7578589037903 0.8311573495668547 0.737683183096824 0.6949115581566693 0.6207134576402413 0.6849629723791334 0.6885663245223049 0.772724091581751 0.8915103915900761 0.9883696696405082 0.7927103451323776 1.0 11.262539955559717 -8.349928882715245 1.7730983511597438 0.995939174342416 0.7049347389929419 0.5745809792574107 0.07804553803738626 0.08265950303478478 0.5057597208975397 0.008881105402870126 0.011105400286127127 4.467567441864096e-09 8.349928882715245 -0.29100443534947407 QRFSPY(ph) ddPTM_A549_MK2206_60min_R1 2 QRFSPY 6 1 F8VRH0 F8VRH0 PCBP2 1 QRFS(0.02)PY(0.98);QRFS(0.024)PY(0.976) 64.866 0.017263999999999998 16415500.0 4515.2 4427.7 3961.6 3957.5 5661.1 4837.799999999999 4142.6 4466.5 6965.5 6073.0 6703.1 True False 5277.255373958597 4653.051017764222 4523.414450132751 4927.0876776589275 4828.359689213821 5349.732784928264 4895.256797317053 5099.640053082572 5387.825371617834 4701.105082118324 5038.535273851392 1.0473788684870575 0.923492794009456 0.897763775438474 0.9778809534646216 0.958286372285945 1.0617634876333804 0.9715634666134193 1.0121274886271605 1.069323737709878 0.933030102322745 1.0 12.298788681031539 -7.240960081584308 22.63562263875885 1.0284975297412584 0.9563080701741302 0.10313041528332001 0.051765624753549865 203.64664706120323 225088.12053220408 0.006674012909844704 0.011546078693737284 5.741692348623658e-08 7.240960081584308 -0.07218945956712819 QRGS(ph)ENGNEGSLLEREESTLK ddPTM_A549_MK2206_60min_R1 1 QRGSENGNEGSLLEREESTLK 21 2 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 QRGS(1)ENGNEGSLLEREESTLK 140.8 3.671e-22 7270500.0 806.98 938.5 743.28 687.46 975.62 894.98 658.68 822.54 1225.1 960.73 1364.5 True False 943.1784952332365 986.2656413423945 848.6882806175971 855.8877308612516 832.1075903959992 989.686189560357 778.3536299079794 939.1375639231028 947.6168060826949 743.7004257440367 1025.6569917158072 0.9195847177479933 0.9615940312486775 0.8274581926242597 0.834477547342069 0.8112922713118526 0.964929013845774 0.7588829756874982 0.9156448710519027 0.9239120034636922 0.7250966275771306 1.0 10.002332618834886 -9.466330281777148 0.7893131615110628 0.9881702786114317 0.870857555113467 0.0 0.09995837384194313 0.4170308913388117 0.5591641259415068 0.02023351373606402 0.013529613218905738 3.4171946536818246e-10 9.466330281777148 -0.11731272349796473 QRHS(ph)YPER ddPTM_A549_MK2206_60min_R1 3 QRHSYPER 8 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 QRHS(1)YPER;QRHS(1)YPER;QRHS(0.991)Y(0.009)PER 70.942 0.0017733 55131500.0 6233.799999999999 6421.5 5186.08 3348.18 5931.099999999999 5058.41 4619.49 5423.63 6429.400000000001 8657.2 9591.0 True False 7285.913038222696 6748.32692155587 5921.544126500522 4168.484250305513 5058.643046880658 5593.687588699197 5458.791537352904 6192.446161670264 4973.151165642054 6701.532507313474 7209.2900018661085 1.010628374824255 0.9360598505274557 0.8213768796882556 0.5782100940906123 0.7016839446840452 0.7758999273508602 0.7571885075978229 0.8589536778333737 0.6898253731442022 0.929569001327287 1.0 12.815641469062422 -10.954551527687139 1.1856509339813837 1.001431460554123 0.7796345470750407 0.24076202187754403 0.11478451533858897 0.4832396257180329 1.1946924297509094 0.08823021069382193 0.019981375667365058 1.1103207914158365e-11 10.954551527687139 -0.22179691347908237 QRHS(ph)YPER ddPTM_A549_PD325901_60min_R1 4 QRHSYPER 8 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 QRHS(1)YPER;QRHS(1)YPER;QRHS(1)YPER;QRHS(0.998)Y(0.002)PER 71.066 0.001757 72551000.0 9950.1 9695.2 8409.3 7980.4000000000015 9572.5 7331.2 8182.6 8314.8 8857.4 10263.400000000001 12578.500000000002 True False 10960.22682712353 10512.248529307355 8980.00566722887 8473.331183196595 8900.160623332233 7271.497137851616 8493.99332069053 8148.9547911655845 8485.154280438206 9615.367172437198 11031.42424168112 0.9935459453831377 0.9529366561380069 0.8140386472762808 0.768108541341468 0.8068006839682474 0.6591621334239871 0.7699815667134654 0.7387037804579742 0.7691803065988442 0.8716342479248061 1.0 13.429331445525245 -4.286341497638568 16.504470413986493 0.8509531087089508 0.8256734068410998 0.0 0.10710158916870408 0.0 0.0 0.01709552764232271 0.0 5.171999835097395e-05 4.286341497638568 -0.025279701867851 QRIDEFEAL ddPTM_A549_MK2206_60min_R1 1 QRIDEFEAL 9 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 55.676 0.047189999999999996 1866100.0 367.14 230.08 348.46 324.79 384.95 240.75 166.58 249.9 460.14 461.21 343.62 False True 429.10425628879364 241.7900892488632 397.8768677537508 404.36356458037704 328.3243649401816 266.226005203084 196.8454297535544 285.32409028665313 355.91902469258946 357.02234067574346 258.28967057045463 1.661329527197431 0.9361198561090318 1.5404288792308496 1.5655429181016254 1.2711478713610553 1.0307264886555523 0.76211111857011 1.1046670571706978 1.3779839662442255 1.3822555888016326 1.0 8.01284613863227 -7.001010023798266 24.096856302328792 1.1332975506980274 1.4014689574646595 0.27548244924109544 0.2372277588688817 30.08652251461835 717860.9654196623 0.035602529915913894 0.066636958053235 9.976770365238518e-08 7.001010023798266 0.2681714067666321 QRIDEFEAL ddPTM_A549_PD325901_60min_R1 1 QRIDEFEAL 9 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 85.212 0.0035488 2717100.0 579.5 749.25 438.63 651.32 701.01 559.06 688.55 553.04 723.99 553.94 676.12 False True 638.3304133946476 812.3919269931041 468.39806949646226 691.5505571449555 651.7734759532124 554.507200715752 714.7531470390171 542.0091833485127 693.5632180430445 518.9641338640085 592.9615262778107 1.0765123622802824 1.370058411871544 0.7899299511668676 1.1662654767603835 1.0991834159031888 0.9351487004503521 1.2053954858179878 0.9140714183445586 1.1696597288474 0.8752070933196882 1.0 9.211794689741806 -11.194751296992298 1.6244759753470952 0.9999972750998604 1.0922480611175462 0.0807707220392212 0.15558193088783587 1.0435451871624075 4.952701623692263 0.10144548851380845 0.021224304041344746 6.3862909873104504e-12 11.194751296992298 0.09225078601768588 QRIDEFES(ph)M ddPTM_A549_MK2206_60min_R1 5 QRIDEFESM 9 1 P26038 P26038 MSN Moesin 1 QRIDEFES(1)M;QRIDEFES(1)M;QRIDEFES(1)M;QRIDEFES(1)M;QRIDEFES(1)M 86.624 0.00097892 37930700.0 4524.8 5254.4 4924.63 4295.36 6628.719999999999 4694.78 4335.17 4267.6 7169.799999999999 7384.6 7153.499999999999 True False 5288.475619261131 5521.826516643022 5623.016585106332 5347.723392826039 5653.644069012284 5191.5785034572555 5122.8142736506 4872.54536897687 5545.851747817898 5716.413731172559 5377.088523443768 0.9835202816921667 1.0269175395882373 1.0457362865778261 0.9945388418863296 1.0514322098962572 0.9654999133494454 0.9527115373525006 0.9061679657556089 1.0313856139132418 1.0631057506770354 1.0 12.392609507676259 -4.252670059645014 14.511955074680959 1.0042278323449554 1.0064379100526144 0.0 0.04570682639079419 0.0 0.0 0.005698375582654372 0.0 5.588946345421367e-05 4.252670059645014 0.0022100777076590195 QRIDEFES(ph)M ddPTM_A549_PD325901_60min_R1 5 QRIDEFESM 9 1 P26038 P26038 MSN Moesin 1 QRIDEFES(1)M;QRIDEFES(1)M;QRIDEFES(1)M;QRIDEFES(1)M;QRIDEFES(1)M 132.88 3.9449e-05 54771000.0 16068.82 16549.589999999997 16979.909999999996 15244.460000000001 19066.069999999996 17037.86 16759.29 17634.98 19006.18 19075.74 18952.15 True False 17700.11477715993 17944.282030091148 18132.268801093567 16186.075671519373 17726.935017570748 16899.10931704447 17397.07395198538 17283.236489525818 18207.416350371346 17871.29452091385 16621.15569757737 1.064914804915751 1.0796049538665131 1.0909150441167246 0.9738237199642252 1.066528425586829 1.0167228816409928 1.0466825694028667 1.039833619514493 1.095436242921735 1.0752137123364227 1.0 14.02073307821586 QRKDS(ph)FQENEDGYR ddPTM_A549_MK2206_60min_R1 6 QRKDSFQENEDGYR 14 2 Q5VYS8-4;Q5VYS8-6;Q5VYS8;Q5VYS8-5;Q5VYS8-3;Q5VYS8-2 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 QRKDS(1)FQENEDGYR;QRKDS(1)FQENEDGYR;QRKDS(1)FQENEDGYR;QRKDS(1)FQENEDGYR;QRKDS(1)FQENEDGYR;QRKDS(1)FQENEDGYR 113.88 9.235600000000001e-07 90480400.0 6093.639999999999 7864.169999999999 7443.9400000000005 6954.44 11592.6 8114.700000000001 7868.299999999999 7092.080000000001 14525.0 13817.199999999999 15035.400000000001 True False 7122.097456805695 8264.422662414088 8499.602625686894 8658.278112196673 9887.343896624367 8973.392167898091 9297.868261075111 8097.4040585840985 11235.110691658765 10695.88492353783 11301.695224070238 0.6301795717900022 0.7312551346113637 0.7520643989394197 0.766104371117384 0.8748549399532913 0.7939863878815853 0.8226967792648137 0.7164769442143801 0.9941084473531314 0.9463965105657637 1.0 13.464251568820583 -8.110270210434567 0.37626670804815465 1.028846422492414 0.6854293379946078 0.6078520267673861 0.07177853960854423 0.48090314634502535 0.1672876691276829 0.0358977852409751 0.05840799128818037 7.757642994583836e-09 8.110270210434567 -0.3434170844978063 QRKDS(ph)FQENEDGYR ddPTM_A549_PD325901_60min_R1 4 QRKDSFQENEDGYR 14 2 Q5VYS8-4;Q5VYS8-6;Q5VYS8;Q5VYS8-5;Q5VYS8-3;Q5VYS8-2 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 QRKDS(1)FQENEDGYR;QRKDS(1)FQENEDGYR;QRKDS(1)FQENEDGYR;QRKDS(1)FQENEDGYR 161.96 9.4025e-20 174981000.0 18141.800000000003 19839.7 23603.8 19528.1 22729.0 21139.9 20972.7 24147.7 25203.0 25475.1 23650.2 True False 19983.542180712706 21511.661146433195 25205.69580917994 20734.30638546708 21132.59345079325 20967.743663311514 21770.827575201794 23666.055179995816 24143.80555579338 23866.597838392237 20741.37533097005 0.9634627338754251 1.0371376441133577 1.2152374375841881 0.9996591862694651 1.0188617251064855 1.0109138535284814 1.049632786052264 1.1410070355681172 1.164040723940952 1.1506757607705864 1.0 14.340223939919703 -8.035224617114082 23.690151112897215 1.08491414489033 1.0444691553591312 0.138690644409888 0.07416790515851861 876.9647004887237 589797.1963514757 0.013694340046964147 0.01768457784230803 9.220943965663042e-09 8.035224617114082 -0.04044498953119868 QRKHCITEDT(ph)PPT(ph)S(ph)LYIEGLDSKEAGGQSSQEER ddPTM_A549_PD325901_60min_R1 1 QRKHCITEDTPPTSLYIEGLDSKEAGGQSSQEER 34 3 E9PK78;Q9P2H5-2;Q9P2H5 E9PK78 USP35 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 35 3 QRKHCIT(0.004)EDT(0.63)PPT(0.662)S(0.342)LY(0.361)IEGLDS(0.282)KEAGGQS(0.363)S(0.356)QEER 42.015 0.011464 308330000.0 9058.1 10438.0 9076.4 9183.6 12482.0 10762.0 11514.0 12292.0 10520.0 10863.0 11693.0 True False 9977.671643779222 11317.646892164192 9692.379084827051 9750.850114531126 11605.307380562337 10674.357840129724 11952.17157070256 12046.826417112541 10077.880984285446 10177.108326108826 10254.835128034132 0.9729724095224881 1.1036400635271648 0.9451521125220758 0.9508539135724143 1.1316912691103491 1.04090974714442 1.1655157222399741 1.1747459873030583 0.9827443209433043 0.9924204727862644 1.0 13.324016676644677 -4.347546841104952 16.28518076389516 1.0243875039293904 1.0300993500413806 0.0 0.0843545776545119 0.0 0.0 0.011507768560184706 0.0 4.492138718122334e-05 4.347546841104952 0.005711846111990271 QRKT(ph)EELEEESFPER ddPTM_A549_MK2206_60min_R1 2 QRKTEELEEESFPER 15 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 QRKT(1)EELEEESFPER;QRKT(1)EELEEESFPER 124.31 8.5823e-08 19681100.0 1335.3600000000001 1616.1999999999998 1334.07 1470.47 1973.7600000000002 2037.71 1731.9899999999998 1244.77 2466.95 2976.1 2205.04 True False 1560.7361215825108 1698.457676651656 1523.2611862602475 1830.7352160119062 1683.422518624062 2253.339119677575 2046.6701637583064 1421.219959448246 1908.1897639096435 2303.796943008782 1657.467711991955 0.9416389292475619 1.0247304755098 0.9190291763992089 1.1045374837569037 1.0156593135687175 1.359507098312943 1.2348175164743365 0.857464642698961 1.1512681363888346 1.3899498170254336 1.0 10.69476505110686 -6.271432474956878 23.953666911940076 1.0876113093968367 0.9680926222854901 0.1520790329234245 0.15476652227975818 568.6360496355452 1363035.3801522385 0.018246486672442136 0.04290336064616906 5.352633712055967e-07 6.271432474956878 -0.11951868711134661 QRPDLGS(ph)AQK ddPTM_A549_MK2206_60min_R1 4 QRPDLGSAQK 10 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK 130.19 3.4993e-07 461972000.0 20866.699999999997 24534.5 22214.4 19302.600000000002 29204.6 21882.4 21764.1 22016.9 31176.800000000003 31348.4 30953.9 True False 24388.488818165737 25783.201254677664 25364.735955429373 24031.737866526633 24908.642027099693 24197.981043638472 25718.355250926496 25137.862998928398 24115.304579119238 24266.774667590656 23267.192345820393 1.0481921692862426 1.108135475542636 1.090150267313442 1.0328593802527952 1.0705478193020639 1.0400043410474182 1.1053484609863733 1.0803995009498446 1.0364509916234563 1.0429610202603505 1.0 14.506009510656094 -9.279671829361103 1.1229641284688883 1.0089097352015757 1.0723008847468294 0.3317708889923565 0.02646378838709025 0.23093702814179798 0.6083553628443741 0.006117873485021491 0.005102797942401051 5.25204176058399e-10 9.279671829361103 0.06339114954525371 QRPDLGS(ph)AQK ddPTM_A549_PD325901_60min_R1 8 QRPDLGSAQK 10 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK 114.72 7.0158e-05 618631700.0 56497.6 58062.1 59448.600000000006 51639.700000000004 69622.0 54408.2 59349.50000000001 62075.200000000004 63863.49999999999 61003.00000000001 62706.09999999999 True False 62233.19476066516 62955.196935957654 63483.13948947266 54829.36698673212 64731.990902861005 53965.11765818119 61608.07769979255 60837.06143894767 61179.539186303584 57151.26016916286 54993.64722671866 1.1316433424410004 1.144772171163997 1.1543722355375874 0.9970127415024999 1.1770812478756814 0.9812973021356953 1.120276264743908 1.106256167883151 1.112483755334189 1.0392338579317926 1.0 15.746977350116605 -14.999999999124514 0.24875299676262688 0.34729198061851757 1.1133160514292373 0.2141407945377961 0.059303858254021916 38.40229379962148 0.4932217865041039 12.340542572537872 0.028364028374770235 1.0000000020158819e-15 14.999999999124514 0.7660240708107198 QRPSYDIFEDS(ph)DDSEPGGPPAPR ddPTM_A549_MK2206_60min_R1 1 QRPSYDIFEDSDDSEPGGPPAPR 23 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 QRPSYDIFEDS(0.999)DDS(0.001)EPGGPPAPR 126.99 1.0827000000000001e-17 5668500.0 617.93 1176.4 892.74 644.78 1369.6 985.78 761.89 978.82 1592.2 1636.5 1304.6 True False 722.2214770619763 1236.2737351893368 1019.3439560307736 802.7511289452738 1168.1336542981494 1090.0945852921946 900.3155509361001 1117.57073251053 1231.5692422209352 1266.8135134013883 980.6318148717049 0.736485871770807 1.2606910324963068 1.039476733848507 0.8186060423200698 1.1912051358959581 1.1116247390309384 0.9180974319641949 1.1396435599601065 1.2558936224010437 1.2918339933394107 1.0 9.937567757856684 -7.196026770270104 0.8938442022218775 1.1164908192302065 0.9984669538772073 0.13375100552771613 0.16476634221626543 1.2334232096638111 1.9283750985802717 0.028732767044547323 0.07288762549113265 6.36756269516485e-08 7.196026770270104 -0.11802386535299925 QRPSYDIFEDSDDS(ph)EPGGPPAPR ddPTM_A549_MK2206_60min_R1 1 QRPSYDIFEDSDDSEPGGPPAPR 23 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 QRPSYDIFEDS(0.42)DDS(0.58)EPGGPPAPR 119.14 7.0879e-16 6002000.0 1101.1 807.16 836.79 1107.2 1921.6 1381.2 908.63 1341.1 1649.8 1356.9 1617.7 True False 1286.9387606896285 848.2409963408923 955.4594047169284 1378.4640497040964 1638.935185528127 1527.3576672336426 1073.716309502775 1531.2050319464986 1276.122934189233 1050.375347592022 1215.980443751308 1.05835481754905 0.6975778275874758 0.7857522788518946 1.133623535467006 1.3478302171307959 1.2560709138723758 0.8830045869737451 1.2592349160013796 1.049460080338451 0.8638094082760138 1.0 10.247904311198617 -6.259897230475133 24.843670888127907 1.076352047284676 0.8322632506486621 0.3058575867288088 0.16603852454914794 115.18373300362853 1855557.7423109796 0.02203155592621414 0.0550916890506722 5.496709301661986e-07 6.259897230475133 -0.2440887966360138 QRPVPQPS(ph)SASLDEYTLMR ddPTM_A549_MK2206_60min_R1 1 QRPVPQPSSASLDEYTLMR 19 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRPVPQPS(0.468)S(0.266)AS(0.266)LDEYTLMR 135.09 7.5802e-17 5793800.0 1190.8 836.36 1187.0 707.73 1785.4 1656.9 1043.6 1254.2 1728.0 2378.2 2123.2 True False 1391.7779277351842 878.927151617608 1355.3344487852316 881.1238817712065 1522.7700251050785 1832.2320582387936 1233.2086114227961 1431.9866908264114 1336.6107590489728 1840.9629682683662 1595.950842661049 0.8720681680988169 0.550723197809844 0.8492332047805311 0.552099637544 0.9541459451006958 1.1480504344255211 0.7727108996456148 0.897262404673287 0.8375012082579819 1.1535210979298023 1.0 10.640200500043576 -6.783884650710933 24.93425612068002 0.927106843520502 0.7051663298290971 0.4076527526990289 0.1460932546675406 166.9416821292031 185453.71078019473 0.018159527799265787 0.03433615557292496 1.644808528904706e-07 6.783884650710933 -0.22194051369140488 QRPVPQPSSAS(ph)LDEYTLMR ddPTM_A549_MK2206_60min_R1 5 QRPVPQPSSASLDEYTLMR 19 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRPVPQPS(0.029)S(0.08)AS(0.884)LDEY(0.002)T(0.004)LMR;QRPVPQPS(0.005)S(0.005)AS(0.987)LDEYT(0.003)LMR;QRPVPQPS(0.01)S(0.039)AS(0.906)LDEY(0.026)T(0.018)LMR;QRPVPQPS(0.005)S(0.009)AS(0.986)LDEYTLMR;QRPVPQPS(0.004)S(0.032)AS(0.964)LDEYTLMR 205.65 1.0187999999999998e-55 451700400.0 9634.1 14378.999999999998 12331.300000000001 11363.399999999998 17910.300000000003 13447.399999999998 12275.2 13266.2 21214.8 17704.3 20763.7 True False 11260.100548869272 15110.82968232529 14080.063764368437 14147.433510122404 15275.718595630939 14870.394942338313 14505.444947237558 15146.724476033598 16409.681673074167 13704.886333829641 15607.500241032985 0.721454452985741 0.9681774434702924 0.9021344575956608 0.9064509557352443 0.9787421662483929 0.9527723666627419 0.9293893783901369 0.9704772860558424 1.051397175694555 0.8780961795405733 1.0 13.92995186762398 -3.155705645301471 0.3098962188216595 1.0218278623813233 7.274738465262883e-14 0.3513114783761728 0.06564223063715587 11.104078517107705 0.2654760811422293 0.016475372268931105 5.641674796283751 0.0006987058101740852 3.155705645301471 -1.0218278623812505 QRPVPQPSSAS(ph)LDEYTLMR ddPTM_A549_PD325901_60min_R1 6 QRPVPQPSSASLDEYTLMR 19 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRPVPQPS(0.003)S(0.058)AS(0.936)LDEY(0.001)T(0.002)LMR;QRPVPQPS(0.024)S(0.067)AS(0.906)LDEY(0.002)T(0.001)LMR;QRPVPQPS(0.002)S(0.021)AS(0.977)LDEYTLMR;QRPVPQPS(0.004)S(0.019)AS(0.978)LDEYTLMR;QRPVPQPS(0.003)S(0.025)AS(0.971)LDEYTLMR;QRPVPQPS(0.004)S(0.002)AS(0.994)LDEYTLMR 237.32 1.5934999999999997e-85 863004000.0 21916.199999999997 29711.800000000003 19767.800000000003 22241.2 24740.300000000003 21429.300000000003 23043.600000000002 23272.4 31399.9 25199.399999999994 34014.9 True False 24141.11649014629 32215.71765957119 21109.36178143806 23614.988410569902 23002.62667740158 21254.786885661768 23920.53680794177 22808.213725155376 30080.271399093614 23608.305583443474 29831.28293821671 0.8092550541706413 1.0799306796926187 0.7076250064456651 0.791618263937179 0.7710907615016793 0.7124999259898529 0.8018608136124541 0.764573678322627 1.0083465555736433 0.7913942431620663 1.0 14.864538403779811 -8.768019512678825 24.982267326865372 1.0039414467793892 0.8059995967578777 0.1289013329045947 0.11355356736607794 94.37930468875297 358321.49062511494 0.016157332130851694 0.01739722912431954 1.7060057371200245e-09 8.768019512678825 -0.19794185002151155 QRPYS(ph)VAVPAFSQGLDDYGAR ddPTM_A549_MK2206_60min_R1 1 QRPYSVAVPAFSQGLDDYGAR 21 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 QRPYS(1)VAVPAFSQGLDDYGAR 108.5 1.4654e-10 9874300.0 1119.9 1037.8 977.06 1064.5 1565.3 1115.2 982.77 1039.8 1576.6 1547.0 1954.7 True False 1308.9117410737585 1090.6195871978014 1115.6217999411117 1325.3025477872216 1335.0464435403715 1233.2097237901523 1161.3265878190693 1187.1948342539476 1219.502617312853 1197.5316255618382 1469.2940430244685 0.8908439718297837 0.7422745585715541 0.7592910386029061 0.9019995378591152 0.9086312231908631 0.8393212574738625 0.7903976697738028 0.8080035714363657 0.829992215038569 0.8150387808670204 1.0 10.520907429339358 -10.569308858266908 0.7177789175500571 1.0088819503534763 0.8273106760663788 0.0 0.07520810869979543 0.45143108273197335 0.38720475023830975 0.04746134667951867 0.011023053229739621 2.695821556558018e-11 10.569308858266908 -0.18157127428709752 QRPYS(ph)VAVPAFSQGLDDYGAR ddPTM_A549_PD325901_60min_R1 2 QRPYSVAVPAFSQGLDDYGAR 21 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 QRPY(0.007)S(0.993)VAVPAFSQGLDDYGAR;QRPY(0.012)S(0.987)VAVPAFSQGLDDYGAR 64.16 0.00042842 39850000.0 3328.7 2917.9 3147.2 3168.8 3703.8999999999996 2832.0 3619.6 2978.5 3181.9 4001.0 3626.2 True False 3666.6271735405767 3163.8016733709414 3360.787917651021 3364.529579133046 3443.7508417613244 2808.937130946606 3757.3458587211217 2919.091480911952 3048.175808355313 3748.3761771850677 3180.200388375725 1.1529547593739187 0.9948434963203185 1.0567849529027729 1.0579615018698447 1.0828722788503924 0.8832579045062188 1.1814808502177976 0.9178954545071503 0.9584854525195995 1.1786603733796586 1.0 11.63490195904199 -7.109640385448389 0.5884363022087078 0.9794508841205973 1.0787905042721408 0.0 0.10014856970371762 1.223284634961755 0.7641220936102059 0.01580251188658266 0.05591677229070645 7.768901488944596e-08 7.109640385448389 0.09933962015154352 QRS(ph)APDLK ddPTM_A549_MK2206_60min_R1 2 QRSAPDLK 8 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 QRS(1)APDLK;QRS(1)APDLK 89.266 0.00074301 57465000.0 4634.9 5119.4 4156.9 4276.9 6415.799999999999 4910.0 4115.3 4283.5 5935.299999999999 7156.6 6902.200000000001 True False 5417.157807574573 5379.955593274647 4746.410926836839 5324.740691997338 5472.044318958866 5429.572941005782 4862.996740693975 4890.699242668578 4590.964026726488 5539.919089525436 5188.193248970934 1.0441318485291682 1.0369612955997252 0.9148485222246258 1.0263188814436486 1.0547109670682049 1.0465248074717965 0.9373198929431819 0.9426594207219704 0.8848868587609173 1.0677935118596953 1.0 12.34101650252071 -7.772010477862941 24.9705007224919 0.9434218309266319 1.0183331199218921 0.1275163038119006 0.057237228185815524 193.6995360078206 457546.6435176736 0.00846205611910385 0.011759945293249722 1.6904001482682325e-08 7.772010477862941 0.07491128899526023 QRS(ph)APDLK ddPTM_A549_PD325901_60min_R1 2 QRSAPDLK 8 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 QRS(1)APDLK;QRS(1)APDLK 102.05 0.00062688 64869000.0 9163.3 10154.7 10308.400000000001 8670.0 12098.6 8906.400000000001 10010.0 11051.2 10335.599999999999 11751.2 10977.3 True False 10093.551470335075 11010.472206922746 11007.9900134449 9205.526209001364 11248.836073904133 8833.869231307515 10390.93602768218 10830.77514650131 9901.23067501718 11009.227226527659 9627.161690838026 1.0484452006182572 1.1436883019635153 1.1434304696389364 0.9562035524719686 1.1684478182816251 0.9175985108585565 1.0793353598258377 1.1250226696419505 1.0284683059223967 1.143558982395083 1.0 13.23289480566789 -2.0000084945401984 0.06372541600394697 0.9072174855599625 1.3985578599670632 0.0 0.08610959583087283 319.1686903726301 1.4712359051859971 2.14261309387419 14.29837032186627 0.009999804407896513 2.0000084945401984 0.49134037440710066 QRS(ph)APDLKESGAAV ddPTM_A549_MK2206_60min_R1 1 QRSAPDLKESGAAV 14 2 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 QRS(1)APDLKESGAAV 61.096000000000004 0.0022010000000000003 10349000.0 2809.0 3292.9 2697.5 2626.0 3595.5 2510.4 2623.2 2296.9 4038.6 4978.8 4772.6 True False 3283.090526543608 3460.4945448869157 3080.046062003509 3269.3701178856186 3066.6067129300486 2776.048861731345 3099.8014847492122 2622.492608961238 3123.863548318971 3854.0856220732285 3587.4317029408994 0.9151646075525846 0.9646161464342518 0.8585657699012231 0.9113400305866337 0.8548195385618381 0.773826261125919 0.86407261278537 0.7310223095847024 0.8707799358962276 1.0743300336320638 1.0 11.808735650870933 -10.333398533714695 0.9669262425630113 0.9916967509298593 0.8607940832253864 0.48384391374912017 0.0666596816715359 0.39921055503895925 0.7256205118668155 0.03062480570447816 0.0120673566866167 4.6408920468500334e-11 10.333398533714695 -0.1309026677044729 QRS(ph)APDLKESGAAV ddPTM_A549_PD325901_60min_R1 2 QRSAPDLKESGAAV 14 2 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 QRS(1)APDLKESGAAV;QRS(1)APDLKESGAAV 93.77600000000001 1.8480999999999998e-05 25307000.0 12407.900000000001 10268.900000000001 7838.6 8087.6 10599.2 8196.6 8493.7 9595.0 10112.5 11177.9 7267.299999999999 True False 13667.540873786791 11134.296241707681 8370.574533330984 8587.152683727732 9854.748757254949 8129.8496071740665 8816.932401430982 9403.620197868115 9687.506792166032 10472.125486367657 6373.468171210335 2.1444432617588953 1.74697604861393 1.3133468793555447 1.347328087793214 1.546214477350016 1.2755770310264516 1.3833806280320105 1.4754322050818915 1.5199741384016914 1.6430811616305567 1.0 12.637862924303656 -2.000000000000007 0.04263372881213213 2.6061122771716627e-15 4.033430544393238 0.17105647678410973 0.25620367981510644 352.36568522611583 1.1102519164908051 27.316938443317937 98.76174835452366 0.009999999999999837 2.000000000000007 4.0334305443932355 QRS(ph)DDESPSTS(ph)SGSSDADQRDPAAPEPEEQEER ddPTM_A549_PD325901_60min_R1 1 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER 33 2 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 2 QRS(0.832)DDES(0.162)PS(0.125)T(0.114)S(0.378)S(0.345)GS(0.023)S(0.021)DADQRDPAAPEPEEQEER 78.372 4.2457e-06 8646100.0 0.0 181.62 271.37 126.01 145.43 194.3 0.0 166.83 283.17 312.09 240.2 True False 0.0 196.9257547954454 289.78680008037526 133.7933515105261 135.21549850626343 192.7176852199597 0.0 163.50244477439688 271.2693496502007 292.3845841383874 210.6569227532539 0.0 0.9348173903883897 1.3756338804009187 0.6351243992453102 0.6418754092626886 0.9148414526385789 0.0 0.7761550991889791 1.2877305246120165 1.3879657042216578 1.0 7.718751517294546 -8.643550299842762 6.101113892588363 1.1348482428002749 0.6725240669563102 0.2936847194284713 0.38570612563318146 0.22988290357295527 11.525112814822725 0.06430279760414141 0.072871401818295 2.272216452674826e-09 8.643550299842762 -0.4623241758439647 QRS(ph)DDESPSTSS(ph)GSSDADQRDPAAPEPEEQEER ddPTM_A549_MK2206_60min_R1 1 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER 33 2 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 2 QRS(0.907)DDES(0.087)PS(0.165)T(0.165)S(0.165)S(0.171)GS(0.171)S(0.171)DADQRDPAAPEPEEQEER 53.073 0.0018018 6541800.0 0.0 0.0 140.87 0.0 0.0 0.0 0.0 0.0 143.38 148.15 0.0 True False 0.0 0.0 160.84748424631482 0.0 0.0 0.0 0.0 0.0 110.90465893081124 114.68281210535642 0.0 0.0 QRS(ph)DDESPSTSSGS(ph)SDADQRDPAAPEPEEQEER ddPTM_A549_MK2206_60min_R1 1 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER 33 2 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 2 QRS(0.984)DDES(0.02)PS(0.105)T(0.096)S(0.087)S(0.08)GS(0.328)S(0.299)DADQRDPAAPEPEEQEER 95.65700000000001 8.6512e-10 6113600.0 0.0 0.0 0.0 0.0 337.67 0.0 0.0 191.42 273.53 200.05 168.83 True False 0.0 0.0 0.0 0.0 287.9991903087443 0.0 0.0 218.55437119916405 211.57589173765382 154.858566059241 126.90485152904338 0.0 0.0 0.0 0.0 2.2694104034535902 0.0 0.0 1.7221908269531034 1.6672009713453126 1.2202730170942295 1.0 6.987603413745705 -7.052948249486335 0.6272655040081248 1.3058933118606988 1.1548790831526244e-10 0.305751641073547 0.6989794032049745 0.8415001919916522 0.5973578392324551 0.14582217098797837 0.5238860405058434 8.852210864568363e-08 7.052948249486335 -1.305893311745211 QRS(ph)DDESPSTSSGS(ph)SDADQRDPAAPEPEEQEER ddPTM_A549_PD325901_60min_R1 1 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER 33 2 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 2 QRS(0.88)DDES(0.162)PS(0.11)T(0.101)S(0.092)S(0.083)GS(0.301)S(0.272)DADQRDPAAPEPEEQEER 84.971 9.1801e-07 7160300.0 186.87 183.66 0.0 148.25 253.45 137.53 0.0 215.66 155.16 241.89 0.0 True False 205.84090483357684 199.137672754826 0.0 157.40706579982142 235.6485463550331 136.41000127792614 0.0 211.3584921180029 148.6391647834345 226.6170241187944 0.0 0.0 QRS(ph)DDESPSTSSGSSDADQR ddPTM_A549_MK2206_60min_R1 2 QRSDDESPSTSSGSSDADQR 20 1 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(0.769)DDES(0.23)PSTSSGSSDADQR;QRS(0.971)DDES(0.028)PSTSSGSSDADQR 75.32600000000001 0.00010138 55918000.0 429.55999999999995 260.35 434.07 490.66999999999996 621.25 399.71 680.4 360.56 488.65000000000003 734.6099999999999 679.75 True False 502.05922626631275 273.60070295523974 495.6276530616732 610.8841720270129 529.8649479648986 442.00704689397566 804.0198727597455 411.6704841686898 377.97155521370405 568.6610907911968 510.9493148543933 0.9826008405733668 0.5354752320848273 0.9700133431099983 1.1955866350483284 1.037020566542683 0.8650702409101687 1.5735804890723246 0.8056973014750097 0.739743736267492 1.1129500994697483 1.0 8.997036375585505 -3.96718748107821 15.733688560607565 0.9293083089339459 0.9472895099944716 0.0 0.26133516721037026 0.0 0.0 0.033506969595822104 0.0 0.0001078481051014028 3.96718748107821 0.017981201060525698 QRS(ph)DDESPSTSSGSSDADQR ddPTM_A549_PD325901_60min_R1 2 QRSDDESPSTSSGSSDADQR 20 1 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(0.713)DDES(0.282)PS(0.004)T(0.001)SSGSSDADQR;QRS(0.995)DDES(0.001)PS(0.001)T(0.001)S(0.001)S(0.001)GS(0.001)S(0.001)DADQR 113.29 1.5456000000000002e-11 45183100.0 437.71 588.2 499.94 482.39 601.92 435.69 955.62 464.56 678.69 433.41 404.28 True False 482.14599697492855 637.7696782880793 533.8689347834426 512.1861347128219 559.6432157112706 432.141885092559 991.9866420353288 455.29398635972996 650.1670195080508 406.0444186337866 354.5561229420711 1.3598580472229036 1.798783428123961 1.5057388668215677 1.4445840914063273 1.578433369215027 1.2188250523124209 2.7978268540504203 1.284123885893568 1.8337492358417904 1.1452190284135295 1.0 8.469870200544463 -10.841165847775914 1.0213768966289034 0.9896880349096715 1.6615225173022283 0.22194391058118623 0.41163902902682253 0.5825478301303539 1.0510456978269465 0.289118534602009 0.06653955244400298 1.4415647436489373e-11 10.841165847775914 0.6718344823925568 QRS(ph)DDESPSTSSGSSDADQRDPAAPEPEEQEER ddPTM_A549_MK2206_60min_R1 4 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER 33 2 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(0.999)DDES(0.001)PSTSSGSSDADQRDPAAPEPEEQEER;QRS(0.967)DDES(0.033)PSTSSGSSDADQRDPAAPEPEEQEER;QRS(0.966)DDES(0.013)PS(0.006)T(0.006)S(0.006)S(0.002)GSSDADQRDPAAPEPEEQEER;QRS(0.985)DDES(0.01)PS(0.003)T(0.001)SSGSSDADQRDPAAPEPEEQEER 333.72 9.067999999999995e-263 665335400.0 3998.9500000000003 6144.4800000000005 5906.740000000001 4503.299999999999 6701.07 5424.849999999999 5101.32 4357.0 7990.2 8198.71 7365.46 True False 4673.874995059297 6457.207786803964 6744.404550983726 5606.608702160818 5715.351479853753 5998.904026276008 6028.163811444362 4974.618092752888 6180.432457727495 6346.615716748605 5536.413005645367 0.8442063462919841 1.1663161292735353 1.2181902874851631 1.012678912581824 1.0323202900552986 1.0835362210440314 1.088821192584001 0.8985272752737867 1.1163243152968239 1.146340728243556 1.0 12.434735853896042 QRS(ph)DDESPSTSSGSSDADQRDPAAPEPEEQEER ddPTM_A549_PD325901_60min_R1 3 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER 33 2 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(1)DDESPSTSSGSSDADQRDPAAPEPEEQEER;QRS(0.999)DDES(0.001)PSTSSGSSDADQRDPAAPEPEEQEER;QRS(0.808)DDES(0.187)PS(0.001)T(0.002)S(0.002)SGSSDADQRDPAAPEPEEQEER 350.14 5.1480999999999974e-287 841425100.0 3973.08 4991.3 4822.139999999999 4017.6 5979.990000000001 3657.8 3848.4799999999996 5943.89 5154.91 5523.74 5490.41 True False 4376.424156773091 5411.934367968876 5149.399418283455 4265.758027368382 5559.97613224555 3628.0120895397263 3994.936012369059 5825.3344510584975 4938.26705938241 5174.970113712633 4815.124376576577 0.9088911966765458 1.1239448755042576 1.0694218914329559 0.8859081705385189 1.1546900344448718 0.7534617604455619 0.8296641374006107 1.2097993728669068 1.025574143713684 1.0747323867450953 1.0 12.233357348598473 -5.254705740886161 0.0057701357923500085 1.2878869086118416 0.7069262892273331 0.006399085253481762 0.136197095821215 266204.77457851067 224.81208722490706 10821.233193533764 11831.693875265668 5.562810415280515e-06 5.254705740886161 -0.5809606193845085 QRS(ph)HILEDDENS(ph)VDISMLK ddPTM_A549_MK2206_60min_R1 1 QRSHILEDDENSVDISMLK 19 1 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 2 QRS(1)HILEDDENS(0.966)VDIS(0.034)MLK 60.521 0.00084104 2554900.0 805.43 1184.3 1091.5 921.39 1400.1 1386.9 1353.0 1195.8 1735.7 1716.5 1733.9 True False 941.366893127099 1244.575811445709 1246.2911127624952 1147.1305913627696 1194.147144701254 1533.6608374502878 1598.8225864843255 1365.3083119839116 1342.566721343347 1328.741457838975 1303.3247767944583 0.7222811304503866 0.9549237715765344 0.9562398681837093 0.8801571272082696 0.9162314458858614 1.1767295955366885 1.2267261506503753 1.0475580118578751 1.0301091065309174 1.0195014178331125 1.0 10.347980919977351 -7.035402306884162 19.786695344985986 1.0452452112201265 0.8905222394737262 0.5215402810564426 0.0904768518051031 40.52241703662438 22648.475318892153 0.014277340556735239 0.02475074759527609 9.217172026711236e-08 7.035402306884162 -0.15472297174640026 QRS(ph)HILEDDENSVDISMLK ddPTM_A549_PD325901_60min_R1 1 QRSHILEDDENSVDISMLK 19 1 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 QRS(0.944)HILEDDENS(0.052)VDIS(0.004)MLK 40.533 0.022238 13101000.0 1847.7 2072.6 2170.3 2055.3 2393.7 2597.4 2278.7 2199.2 2657.5 2600.1 2585.7 True False 2035.2771437951528 2247.2652757903325 2317.5896090740994 2182.251213075029 2225.574769816702 2576.2476355652257 2365.4171754524837 2155.335230760975 2545.8145167051894 2435.9292422641574 2267.675292102783 0.8975170082255778 0.9909995860591114 1.02201122759733 0.9623296689233929 0.9814345014770428 1.1360743068185517 1.043102239412357 0.9504602525180593 1.122653902686611 1.074196667727219 1.0 11.146998360563748 -3.1939241343385993 0.4505011246981153 1.0521188318784245 5.153694843452541e-15 0.35189894959313417 0.0560063358994641 22.845466522375077 0.701260758107197 0.012808760462887142 19.2830193417915 0.0006398465986935776 3.1939241343385993 -1.0521188318784194 QRS(ph)IQEDTK ddPTM_A549_MK2206_60min_R1 4 QRSIQEDTK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QRS(1)IQEDTK;QRS(1)IQEDTK;QRS(1)IQEDTK;QRS(1)IQEDTK 115.57 0.00016869 181010800.0 15946.000000000002 22227.0 19235.7 15870.7 22372.2 17465.0 14561.6 16356.399999999998 22578.1 24651.4 23743.4 True False 18637.294957730308 23358.25936080705 21963.61150505315 19759.022212462794 19081.279016274126 19313.13470767128 17207.254231596577 18674.96978937419 17464.1963998169 19082.631618859155 17847.258495496586 1.0442665444910249 1.3087869695337835 1.2306434352701985 1.1071180605944944 1.069143421724346 1.0821345313368202 0.9641399117930912 1.046377503530106 0.9785366421528358 1.069219209419435 1.0 14.123414859478315 -6.916350568764292 1.091123790539015 0.9935170510301278 1.2038287162215682 0.5009688016997103 0.07015850485212465 0.22323543362181208 0.5198679645516117 0.009896697576811176 0.027240581767245406 1.2124097807118348e-07 6.916350568764292 0.2103116651914404 QRS(ph)IQEDTK ddPTM_A549_PD325901_60min_R1 4 QRSIQEDTK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QRS(1)IQEDTK;QRS(1)IQEDTK;QRS(1)IQEDTK;QRS(1)IQEDTK 142.51 1.4677999999999999e-05 176359000.0 17721.8 21009.6 21591.7 17119.5 26798.600000000002 17912.1 19703.0 18789.9 19220.2 21202.5 20849.4 True False 19520.90408990037 22780.152725197622 23057.04260343973 18176.932633794568 24916.358786151086 17766.229796337826 20452.8084468953 18415.120704108598 18412.441834045938 19863.7705315587 18285.05597523602 1.0675878770258125 1.2458344538867938 1.2609774142702408 0.9940867918814201 1.3626624288105014 0.971625671827264 1.1185532313707505 1.0071131709440062 1.0069666649630409 1.0863390606220062 1.0 14.158377422694238 -7.30112827925646 24.99173549457549 1.0113112937203084 1.1830193186648943 0.3619615390825136 0.10008369418270051 342.5540534729516 215702.42196333985 0.01308917233217287 0.020924666647233657 4.998868596352097e-08 7.30112827925646 0.17170802494458592 QRS(ph)IQEDTKK ddPTM_A549_MK2206_60min_R1 3 QRSIQEDTKK 10 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QRS(1)IQEDTKK;QRS(0.994)IQEDT(0.006)KK;QRS(1)IQEDTKK 106.32 6.0763999999999996e-05 53310000.0 9361.7 11452.2 9788.5 7737.0 12271.5 9380.6 8859.400000000001 8628.300000000001 11806.0 14525.3 14019.2 True False 10941.726088409861 12035.06806369886 11176.656488571394 9632.565347327127 10466.378605957754 10373.24886566168 10469.038302068911 9851.387948060536 9131.959850307978 11244.02464174103 10537.845729763454 1.0383266531892448 1.1420804946599854 1.0606206216327176 0.9140924620029859 0.9932180518069413 0.9843804067432036 0.9934704464784296 0.9348578638075842 0.8665869746522628 1.067013593678167 1.0 13.363292343996333 -6.149716984294947 4.693940382513486 0.9458955504501537 1.0922721965868882 0.38507098833102305 0.05770918662108123 0.1300214396696039 4.5056560212974315 0.007998001650219555 0.02208164937586363 7.084072801706225e-07 6.149716984294947 0.1463766461367345 QRS(ph)IQEDTKK ddPTM_A549_PD325901_60min_R1 4 QRSIQEDTKK 10 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QRS(1)IQEDTKK;QRS(0.996)IQEDT(0.004)KK;QRS(1)IQEDTKK;QRS(1)IQEDTKK 110.51 3.8015e-05 118045000.0 11922.2 12669.1 13728.0 11459.7 14970.7 13633.100000000002 15631.4 14532.5 13880.300000000001 14590.399999999998 14263.0 True False 13132.532967340245 13736.769519210313 14659.664633170176 12167.53964213297 13919.209678111236 13522.076553639907 16226.261480830284 14242.637886974291 13296.95926104347 13669.159653986757 12508.741420606419 1.0498684500509552 1.0981735937542756 1.1719536075004644 0.9727229329474054 1.1127586069675457 1.0810101591327292 1.297193773156088 1.1386147821004213 1.0630133611314863 1.0927685843332495 1.0 13.610649018166438 -9.266067782666408 1.7160767733254536 1.0196336581856502 1.1151130770842623 0.08255403361556835 0.07970494244685564 0.35849794962677217 2.179782925423501 0.016752612802686844 0.014955021248584287 5.419163040201299e-10 9.266067782666408 0.09547941889861211 QRS(ph)LGPSLATDKS ddPTM_A549_MK2206_60min_R1 2 QRSLGPSLATDKS 13 2 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 QRS(1)LGPSLATDKS;QRS(1)LGPSLATDKS 103.71 3.9474e-05 52907000.0 16736.2 16360.0 15384.0 13024.099999999999 21957.4 16839.4 15132.400000000001 16420.4 22252.6 21571.0 20686.9 True False 19560.86139919515 17192.654120790172 17565.68252747432 16215.00508467407 18727.495546791906 18621.33413091094 17881.761203041708 18748.041985365966 17212.42163010021 16698.09611828986 15549.77180060515 1.2579516696466184 1.105653146634672 1.129642463742826 1.0427809033212327 1.2043582238334256 1.197531022943131 1.149969364974591 1.205679557602019 1.1069243877540604 1.073848306741069 1.0 13.924605787908478 -9.816398888416732 0.8007290742455133 1.0109135713204118 1.1563694409510312 0.36551894386328365 0.05941118479703255 0.3325141501310796 0.4436036796362497 0.022684070392930886 0.011944780161653885 1.5261636718593703e-10 9.816398888416732 0.1454558696306194 QRS(ph)LGPSLATDKS ddPTM_A549_PD325901_60min_R1 2 QRSLGPSLATDKS 13 2 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 QRS(1)LGPSLATDKS;QRS(1)LGPSLATDKS 121.34 2.9968000000000003e-06 91040000.0 22172.9 22392.2 20991.1 20534.9 25548.8 20053.3 23674.0 24258.8 23146.5 24561.6 24279.0 True False 24423.876485173732 24279.269279432738 22415.682275738534 21803.29413485838 23754.34042657515 19889.992573450432 24574.92702490988 23774.939203339545 22173.733099121975 23010.776384291115 21292.83691726168 1.1470466138485182 1.1402552592581037 1.0527334785327072 1.0239731896496556 1.1156024215504123 0.9341166069480394 1.154140574147143 1.1165698256048575 1.0413705409609448 1.0806815678767885 1.0 14.378080557324788 -2.000000006236264 0.04708688327656977 0.8378796888926883 1.4884901274503857 0.04305294403547788 0.0651521526596271 453.1383966661773 1.570754465605703 5.273547763669553 21.73720655443521 0.009999999856404717 2.000000006236264 0.6506104385576974 QRS(ph)LLR ddPTM_A549_MK2206_60min_R1 2 QRSLLR 6 1 Q96I34 Q96I34 PPP1R16A Protein phosphatase 1 regulatory subunit 16A 1 QRS(1)LLR;QRS(1)LLR 74.127 0.012984 16391800.0 911.62 1808.85 1138.78 683.49 1461.38 1189.52 1049.99 1091.96 1443.49 1556.19 1610.56 True False 1065.4791690308593 1900.9127387769736 1300.2761277065267 850.9450806830323 1246.4129378783805 1315.394216860528 1240.7595917092967 1246.7486739872495 1116.541819779863 1204.6455981791062 1210.613502805284 0.8801150545255663 1.57020612637485 1.0740637905437802 0.7029040058707315 1.029571316518559 1.0865517473681252 1.0249014973268982 1.0298486437646959 0.9222942063611267 0.9950703468841634 1.0 10.241522632282923 -5.991174668029052 24.949077708819242 0.9684563430937252 1.2494042256022326 0.23144553509238452 0.17536385034372187 160.9391861111844 454963.8069561956 0.02111988207278512 0.06553097483423916 1.0205289566587515e-06 5.991174668029052 0.28094788250850744 QRS(ph)LLR ddPTM_A549_PD325901_60min_R1 2 QRSLLR 6 1 Q96I34 Q96I34 PPP1R16A Protein phosphatase 1 regulatory subunit 16A 1 QRS(1)LLR;QRS(1)LLR 61.961999999999996 0.017244 437490000.0 2333.0 2312.72 2316.5299999999997 2160.5 2775.7 2205.2799999999997 2800.2 2662.6 2457.87 3132.8 3226.7 True False 2569.8444425361727 2507.6210308915443 2473.7436562265234 2293.9491781484926 2580.7444076451598 2187.320930838254 2906.7631433282336 2609.492354230707 2354.5742713731643 2934.9944733530083 2829.8363557365706 0.9081247533365846 0.8861364106119282 0.8741649145936706 0.8106296229809398 0.9119765538433139 0.7729496182364658 1.0271841823770902 0.9221354262909274 0.8320531562187448 1.0371604942466952 1.0 11.466502911714482 -7.755044947303042 24.999997012882115 0.9260693418652411 0.8624933443461263 0.2926680071941118 0.06929495707665446 234.10043026179233 915245.9102624271 0.011427123973814398 0.016719586167822875 1.7577416870863468e-08 7.755044947303042 -0.0635759975191148 QRS(ph)LS(ph)PVAAPPLREPR ddPTM_A549_MK2206_60min_R1 1 QRSLSPVAAPPLREPR 16 2 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 2 QRS(1)LS(1)PVAAPPLREPR 64.2 0.00099634 3511400.0 210.52 166.46 232.88 234.25 355.03 137.49 208.92 280.08 457.56 402.51 397.81 True False 246.05062928015687 174.932102991854 265.9058857903156 291.64126051588204 302.80555730539703 152.03910054152436 246.87805969571724 319.7821977090266 353.9233905731762 311.58271144466414 299.0227980025395 0.8228490634284923 0.5850125948937458 0.8892495407258458 0.975314465866931 1.012650404344171 0.5084532067693152 0.8256161782474545 1.0694241370395805 1.183600022932601 1.0420031968332326 1.0 8.224111671894955 -8.25776190327704 5.357976753295607 1.0884071414095848 0.8001097525471316 0.44285510772054615 0.14615888161919643 0.12528893256594037 12.613593827603758 0.025207213065945866 0.031694996657691675 5.523801920752849e-09 8.25776190327704 -0.28829738886245326 QRS(ph)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR ddPTM_A549_PD325901_60min_R1 3 QRSMVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR 34 1 R4GNG3;Q14161-11;Q14161-7;Q14161-9;Q14161-6;Q14161-5;Q14161-3;Q14161;F8WAK2;F8VXI9;Q14161-10;Q14161-8;Q14161-4 R4GNG3 GIT2 ARF GTPase-activating protein GIT2 1 QRS(1)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR;QRS(1)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR;QRS(0.995)MVWPGDGLVPDT(0.005)AEPHVAPSPTLPSTEDVIR 64.30199999999999 0.00036978 10122600.0 2377.83 2467.7799999999997 2637.52 2486.01 2683.8 2729.2799999999997 2707.28 2380.9799999999996 2612.27 2722.21 2894.8100000000004 True False 2619.2255511340713 2675.748481274663 2816.517967896198 2639.565191561646 2495.2991466073718 2707.053648569898 2810.30702188046 2333.4894860573245 2502.485376313626 2550.3291960247348 2538.7667217125195 1.0316920923586388 1.053956024549488 1.1094040046327385 1.039703714794691 0.9828784682210476 1.0662868807197303 1.1069575624438521 0.9191429311328275 0.9857090668911794 1.00455436658017 1.0 11.309912121597018 -8.252904364490426 24.998720434612036 0.9875047995441594 1.0548025108296222 0.47463018237387056 0.03918789849754119 488.29930148522743 1430209.6275286376 0.006308188914477116 0.008076503622142583 5.585931883850244e-09 8.252904364490426 0.0672977112854628 QRS(ph)PAPGSPDEEGGAEAPAAGIR ddPTM_A549_MK2206_60min_R1 3 QRSPAPGSPDEEGGAEAPAAGIR 23 1 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 QRS(0.989)PAPGS(0.011)PDEEGGAEAPAAGIR;QRS(1)PAPGSPDEEGGAEAPAAGIR;QRS(0.984)PAPGS(0.016)PDEEGGAEAPAAGIR 187.69 2.3108e-50 230562900.0 2327.34 1991.36 2293.52 2506.94 2873.28 2012.6100000000001 1979.8400000000001 1753.29 2957.98 2869.5099999999998 3671.87 True False 2720.1380940000013 2092.711718213736 2618.7756234017743 3121.1404125408117 2450.624318211 2225.583054337606 2339.551300535941 2001.824226725433 2288.002252923426 2221.2856980387533 2760.0433405434355 0.9855418043777613 0.7582169770572131 0.9488168482478081 1.1308302180234164 0.8878934189955464 0.8063580095446625 0.8476502039548763 0.7252872436167201 0.8289733060760316 0.8048010208424465 1.0 11.430475206265587 -6.935192309745269 24.999512151923163 0.8865275357226332 0.9497481220548306 0.1296836867516773 0.10768713836918352 154.7148904275404 59679.38630049983 0.017570554405360775 0.03320522583738248 1.1609344271509614e-07 6.935192309745269 0.0632205863321974 QRS(ph)PAPGSPDEEGGAEAPAAGIR ddPTM_A549_PD325901_60min_R1 3 QRSPAPGSPDEEGGAEAPAAGIR 23 1 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 QRS(1)PAPGSPDEEGGAEAPAAGIR;QRS(1)PAPGSPDEEGGAEAPAAGIR;QRS(0.993)PAPGS(0.007)PDEEGGAEAPAAGIR 253.45 1.0064999999999999e-110 263864900.0 4896.17 5062.759999999999 5412.280000000001 4617.91 5830.39 5080.530000000001 5194.39 5075.15 5992.58 5565.92 5850.94 True False 5393.225574030148 5489.416552957761 5779.589867483559 4903.147812665452 5420.883520153567 5039.1558481243555 5392.065353929276 4973.922151871846 5740.732702358299 5214.486861314147 5131.3114721645425 1.0510423316312782 1.0697882174441768 1.1263377596226005 0.9555350204841796 1.056432366181598 0.9820405320277094 1.0508162256723699 0.9693276619151897 1.11876519940363 1.0162093822604221 1.0 12.32511188487642 -9.070835456714862 0.002100032389608892 0.0013717471139237966 2.0895993250624327 0.0 0.05456701238274752 161305.64709257716 224.60398609382864 111909.06060418865 111426.90281388693 8.495022691730604e-10 9.070835456714862 2.088227577948509 QRS(ph)PASDLELR ddPTM_A549_MK2206_60min_R1 1 QRSPASDLELR 11 1 B9ZVR7;Q15772-1;Q15772 B9ZVR7 SPEG Striated muscle preferentially expressed protein kinase 1 QRS(0.989)PAS(0.011)DLELR 56.147 0.004377399999999999 2362300.0 277.84 141.95 130.87 0.0 244.23 148.4 142.41 230.55 225.81 383.75 221.02 True False 324.73259946417824 149.1746486825284 149.4293338774418 0.0 208.30409052952461 164.1035895000525 168.28405361510198 263.23116852976335 174.66439554447257 297.0606084740501 166.13463415832 1.9546351735106622 0.897914209389781 0.899447214209659 0.0 1.2538270035314774 0.9877747065290913 1.0129378167753609 1.5844448682441135 1.0513424634746782 1.7880715239121219 1.0 7.376209053681997 QRS(ph)PIALPVK ddPTM_A549_MK2206_60min_R1 2 QRSPIALPVK 10 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVK;QRS(1)PIALPVK 74.133 0.0004564 136951000.0 6544.200000000001 7012.0 6033.6 5799.5 8191.1 6870.799999999999 6333.6 7479.9 9044.099999999999 9796.8 9298.2 True False 7648.700969671303 7368.880849326451 6889.2552065632535 7220.377760349447 6986.200040684556 7597.863495532075 7484.333136553678 8540.198731233037 6995.625790459963 7583.696075826903 6989.200322735005 1.0943599577180558 1.0543238867193994 0.9857000641623274 1.0330763788329904 0.9995707259898262 1.0870862394396057 1.0708425557939822 1.2219135719222163 1.000919342332206 1.0850591949923194 1.0 12.770911682119394 QRS(ph)PIALPVK ddPTM_A549_PD325901_60min_R1 2 QRSPIALPVK 10 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVK;QRS(1)PIALPVK 67.964 0.0012062999999999998 221030000.0 6365.6 6002.0 6607.9 5696.9 8107.2 6943.4 6372.5 6776.799999999999 7712.900000000001 6997.7 6365.7 True False 7011.831025892956 6507.809604020833 7056.351830530687 6048.7845744013675 7537.778240321662 6886.855252476936 6615.008974665804 6641.631407703245 7388.7536353322475 6555.864027765049 5582.759255497037 1.2559794726933264 1.1656976964594972 1.263954168108303 1.083475804271062 1.3501886603653248 1.2335934503526775 1.1848995580728952 1.1896682453508263 1.3234949416915922 1.1743053439586975 1.0 12.446762628996469 -10.940685779459566 1.1653790545492257 0.9983198342954424 1.233046328780481 0.2007857990073022 0.08602387566873039 0.26932212715846787 0.6423248084813508 0.051362396012008836 0.011673706357889987 1.146342042332368e-11 10.940685779459566 0.23472649448503857 QRS(ph)PIALPVKQEPPQIDAVK ddPTM_A549_MK2206_60min_R1 4 QRSPIALPVKQEPPQIDAVK 20 2 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK 164.7 5.1714e-28 144627100.0 9853.289999999999 11976.6 12399.8 10697.0 16142.9 11774.0 12149.5 12214.2 17740.800000000003 17105.7 17564.1 True False 11516.284462188276 12586.157783805362 14158.278094395211 13317.765480206575 13768.300794370329 13019.916865051327 14356.9068843247 13945.60025441871 13722.537126236133 13241.510489575401 13202.449225500632 0.8722839425842657 0.9533199157846486 1.0723978447156903 1.0087344592458807 1.0428595906111686 0.9861743561871277 1.0874426887849131 1.056288876118734 1.0393932892187117 1.0029586377048376 1.0 13.688517972596044 -5.495766955777202 3.6218508725309433 1.0274879307583271 0.8798173787184889 0.7122924983226773 0.031050361273218197 0.09501006082990222 2.4885650859091504 0.00429425731430412 0.027087206319418286 3.193250907143931e-06 5.495766955777202 -0.14767055203983825 QRS(ph)PIALPVKQEPPQIDAVK ddPTM_A549_PD325901_60min_R1 7 QRSPIALPVKQEPPQIDAVK 20 2 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK 188.44 1.3464e-44 233913400.0 27245.9 25698.1 30306.7 27034.6 31194.6 29571.7 32772.7 32653.600000000006 33289.0 31706.399999999998 32248.899999999998 True False 30011.88371062851 27863.76907448979 32363.494910992024 28704.465841968642 29003.5989115278 29330.877879665877 34019.883032409576 32002.298331746366 31889.979095615814 29704.452492951932 28282.48974262035 1.0611471615033257 0.9851950563072398 1.144294409916175 1.014920047817162 1.0254966650910076 1.0370684528337566 1.2028602623743996 1.1315233779973919 1.1275520431837778 1.0502771419090715 1.0 14.787621507519441 QRS(ph)PLLNQPVPELSHASLIANQSPFR ddPTM_A549_MK2206_60min_R1 2 QRSPLLNQPVPELSHASLIANQSPFR 26 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 QRS(1)PLLNQPVPELSHASLIANQSPFR;QRS(1)PLLNQPVPELSHASLIANQSPFR 113.65 5.7146999999999996e-15 9782200.0 906.4000000000001 844.5899999999999 1073.1200000000001 880.0 1254.79 770.62 730.1500000000001 720.97 1368.25 1192.1599999999999 1436.0500000000002 True False 1059.378160647607 887.5760234644357 1225.3045523845055 1095.6000395047015 1070.2120532102615 852.1664969038445 862.8088037853146 823.1697053780233 1058.3435596462714 922.8502280089209 1079.439152036266 0.9814153569000942 0.8222566522532581 1.1351307297619115 1.0149715594787807 0.9914519509426739 0.7894530185386626 0.7993121262627009 0.7625901875295026 0.9804568952773302 0.8549349227031889 1.0 10.076066205623523 -4.246491152724196 15.786321046535877 0.9537231666964747 0.9343090007483504 0.0 0.11912882787483856 0.0 0.0 0.01582326121990322 0.0 5.669031201322098e-05 4.246491152724196 -0.019414165948124285 QRS(ph)PLLNQPVPELSHASLIANQSPFR ddPTM_A549_PD325901_60min_R1 2 QRSPLLNQPVPELSHASLIANQSPFR 26 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 QRS(1)PLLNQPVPELSHASLIANQSPFR;QRS(1)PLLNQPVPELSHASLIANQSPFR 119.54 1.5486e-17 16457600.0 2032.0 1786.07 1728.06 1695.01 1910.29 2328.4300000000003 1801.1399999999999 2314.8 1886.96 2292.5 2214.9 True False 2238.287144120662 1936.5883871132112 1845.3365432689436 1799.7069180529866 1776.117820542735 2309.4680380685054 1869.6833683216248 2268.62949807453 1807.6576332801585 2147.7511587595036 1942.4813414079183 1.1522824422593128 0.9969662749550862 0.9499893275327094 0.9264989473456418 0.9143551511570236 1.188926755092841 0.9625232059971659 1.1679028517361296 0.9305920189534284 1.105674022692442 1.0 10.923685025489384 QRS(ph)PLSDYMNLDFSSPK ddPTM_A549_MK2206_60min_R1 7 QRSPLSDYMNLDFSSPK 17 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRS(0.958)PLS(0.042)DYMNLDFSSPK;QRS(0.995)PLS(0.005)DYMNLDFSSPK;QRS(0.832)PLS(0.16)DY(0.008)MNLDFSSPK;QRS(0.714)PLS(0.286)DYMNLDFSSPK;QRS(0.881)PLS(0.107)DY(0.012)MNLDFSSPK;QRS(0.827)PLS(0.135)DY(0.038)MNLDFSSPK;QRS(0.816)PLS(0.149)DY(0.035)MNLDFSSPK 169.9 2.4325999999999996e-30 35138300.0 13401.699999999999 14733.300000000001 15540.199999999999 13309.5 18641.100000000002 13737.2 12531.8 13135.2 19019.9 18594.5 18327.6 True False 15663.579319893028 15483.162038987637 17744.03403623612 16570.328097486166 15899.018883715844 15190.861385984637 14808.665845753341 14997.154824862919 14711.92301853911 14393.989535558894 13776.351103972604 1.1369904266868036 1.1238942679475445 1.288006809808976 1.2028096534726007 1.1540805517893007 1.102676700915683 1.0749338292839425 1.0886158977567202 1.067911445309834 1.044833238273681 1.0 13.749906196379515 -8.068941508510834 0.49671594878855063 1.0152509712186704 1.195467544313175 0.6369513526351329 0.04542338850886857 0.3877461205957533 0.20972643208990316 0.015012375755863928 0.024818278174383323 8.532150186699685e-09 8.068941508510834 0.18021657309450467 QRS(ph)PLSDYMNLDFSSPK ddPTM_A549_PD325901_60min_R1 5 QRSPLSDYMNLDFSSPK 17 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRS(0.999)PLS(0.001)DYMNLDFSSPK;QRS(0.997)PLS(0.003)DYMNLDFSSPK;QRS(0.716)PLS(0.218)DY(0.066)MNLDFSSPK;QRS(0.935)PLS(0.064)DYMNLDFSSPK;QRS(0.992)PLS(0.008)DYMNLDFSSPK 190.91 2.9389999999999997e-40 72581600.0 13841.400000000001 16002.8 16337.7 14575.199999999999 19130.9 15859.400000000001 17306.1 18112.800000000003 18221.8 17635.8 17949.8 True False 15246.568738499878 17351.41211783149 17446.47456857112 15475.477001319097 17787.211582022122 15730.246304567314 17964.69310576129 17751.525994783275 17456.001114016413 16522.272578255543 15742.0883931572 0.9685226227752147 1.1022306370337644 1.108269381599635 0.9830637851103673 1.1299143504843931 0.999247743482686 1.1411886820283779 1.1276474601997242 1.1088745456164646 1.0495603992058304 1.0 13.942339325387943 -5.247426773292756 24.181901008322093 1.065996238795441 0.9685225269835321 0.21614569099488412 0.05595257442841912 2095.7743050118916 3616634.9930775403 0.008228561462347576 0.22600455977296396 5.656831292908123e-06 5.247426773292756 -0.09747371181190878 QRS(ph)PS(ph)PAPAPAPAAAAGPPTR ddPTM_A549_MK2206_60min_R1 2 QRSPSPAPAPAPAAAAGPPTR 21 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR 79.304 5.2476000000000004e-05 54504000.0 3518.3999999999996 3219.2 3376.2 2890.3 5217.1 3518.7 2954.9 3296.3999999999996 4650.700000000001 5038.1 4703.2 True False 4112.219903378795 3383.0435296850687 3854.995927538923 3598.4236297504967 4449.6715010505795 3891.046498475976 3491.767081154868 3763.674794801612 3597.3238756418154 3899.9897108875894 3535.2656382834616 1.1631996925061256 0.9569418187561419 1.0904402446574581 1.0178651331835142 1.2586526604578165 1.1006376596824172 0.9876958165017228 1.0646087677386116 1.0175540521442927 1.1031673740876848 1.0 11.787602907231642 -7.753403295969719 24.954328753677125 1.0122158054965464 1.0948687155149586 0.10931173210761647 0.07879590618369163 199.0740736599489 618178.9714528561 0.01095903387549549 0.01609121654218866 1.764398598066442e-08 7.753403295969719 0.08265291001841213 QRS(ph)PS(ph)PAPAPAPAAAAGPPTR ddPTM_A549_PD325901_60min_R1 2 QRSPSPAPAPAPAAAAGPPTR 21 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR 70.15100000000001 0.0002164 73024000.0 4620.0 4729.4 4886.5 5148.1 6037.700000000001 5481.799999999999 4844.3 5256.5 5855.8 5861.8 6346.799999999999 True False 5089.018998935758 5127.963135830744 5218.127274911571 5466.086444816596 5613.632780934244 5437.158038284994 5028.6524874026745 5151.654983855524 5609.7010900930345 5491.684947618957 5566.183835680069 0.9142743303435985 0.9212708899335547 0.9374694456662742 0.9820168729926176 1.0085245020026143 0.976819702474072 0.903429106162154 0.9255272797194816 1.0078181489684213 0.9866158053236469 1.0 12.442472842351407 -2.0000000000345506 0.13974806080362642 1.019495260577779 0.6634953479884579 0.22948462282223125 0.03368930383237299 57.592933152038306 0.513089837411474 0.08336548455753667 4.126854580844196 0.009999999999204444 2.0000000000345506 -0.35599991258932107 QRS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 QRSPSK 6 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QRS(1)PSK 54.776 0.02285 10728000.0 1836.5 1816.9 1642.0 1391.8 471.35 410.02 424.88 418.46 729.76 1864.6 2238.2 True False 2146.4563018858453 1909.3724493926443 1874.8602905689572 1732.7910624802755 402.0150393935694 453.40804425075163 502.0751962641985 477.7779864800032 564.4705251872563 1443.3855649790582 1682.3931688225125 1.2758351268081558 1.1349145281711954 1.1144007984062074 1.0299560736406437 0.2389542746865378 0.2695018338478435 0.2984291695713405 0.28398711747884386 0.3355164153349022 0.8579359401401202 1.0 10.716299181947429 -6.611000199845904 6.530099712544542 0.5613862926069301 1.1551922709690312 0.6154562161469044 0.24942218808470515 0.16262880770921817 9.936797126788942 0.047602790500031286 0.09977523443070117 2.4490621148786764e-07 6.611000199845904 0.5938059783621011 QRS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 QRSPSK 6 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QRS(0.972)PS(0.028)K;QRS(0.96)PS(0.04)K 54.776 0.02285 35682000.0 4372.5 4610.1 4573.299999999999 4468.8 4670.9 2690.3 4379.2 3127.2 3033.2 4200.0 4790.6 True False 4816.392981135627 4998.6093061473575 4883.6716394869745 4744.827626618831 4342.832097730219 2668.3910887661214 4545.852852390187 3064.8255427590598 2905.725152237133 3934.811283223516 4201.386570115479 1.1463817720070553 1.189752293136398 1.1623952135765365 1.1293480253326023 1.0336663920956106 0.6351215352918068 1.0819887140890345 0.7294795400545159 0.6916109964518847 0.9365506404985162 1.0 12.036649819148888 -7.018196286825097 5.14125451803305 0.844985272290924 1.1531401438659228 0.5775801904436964 0.12509760355975014 0.1168727052351792 8.985666638544009 0.021000835831052434 0.03828636571381167 9.589671119537303e-08 7.018196286825097 0.30815487157499877 QRS(ph)PSKVKPPVR ddPTM_A549_MK2206_60min_R1 2 QRSPSKVKPPVR 12 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QRS(0.998)PS(0.002)KVKPPVR;QRS(0.998)PS(0.002)KVKPPVR 49.482 0.0054336 8228500.0 1142.4 1707.25 1883.75 1469.5500000000002 2629.3 1574.71 1281.97 892.0799999999999 2671.3 3068.4 3068.5 True False 1335.2091910015733 1794.141732745662 2150.8940757364644 1829.589815970607 2242.5334530126474 1741.3447669920997 1514.887354911539 1018.5350718804214 2066.2548151895394 2375.2463089036473 2306.5067637082825 0.5788880449042746 0.7778610325257116 0.9325331750939104 0.7932297640563113 0.9722639830490755 0.7549705877265478 0.656788602898342 0.44159205943227897 0.8958373102134423 1.0298024468329974 1.0 11.171493807698255 -8.98129083002815 21.558513180713927 0.95404707333786 0.7484206256038166 0.3533035060869254 0.14335360572849135 25.273817196974953 29124.492322223876 0.026516727641783203 0.027009439061028512 1.0440208451495632e-09 8.98129083002815 -0.20562644773404337 QRS(ph)PSKVKPPVR ddPTM_A549_PD325901_60min_R1 1 QRSPSKVKPPVR 12 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QRS(0.967)PS(0.033)KVKPPVR 49.482 0.0054336 5182600.0 1029.4 929.67 989.41 1021.5 1672.8 2391.7 1581.6 1635.6 2479.9 1644.3 1352.3 True False 1133.9039301957725 1008.0165535771488 1056.5573124056607 1084.595735005178 1555.3082988467133 2372.2227881656063 1641.7886534847287 1602.9766748966217 2375.678427084552 1540.4786173820069 1185.975672935992 0.9560937513909447 0.8499470744469075 0.8908760411501998 0.9145176918512683 1.311416696260223 2.000228876780373 1.3843358602966365 1.3516100806084035 2.0031426287213305 1.2989124925036701 1.0 10.211858701886175 -6.852235097748792 4.012550305947634 1.504833314547352 0.8958902525938985 0.508534012218932 0.2764869079607185 0.19239613599283667 5.8430969971263265 0.055510021790701254 0.1095585081116032 1.4052865907852385e-07 6.852235097748792 -0.6089430619534535 QRS(ph)PSPAPAPAPAAAAGPPTR ddPTM_A549_MK2206_60min_R1 2 QRSPSPAPAPAPAAAAGPPTR 21 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 QRS(0.978)PS(0.022)PAPAPAPAAAAGPPTR;QRS(0.944)PS(0.056)PAPAPAPAAAAGPPTR 80.009 4.5638999999999995e-05 10436100.0 2075.2 3000.5 2948.8999999999996 2196.7 3096.0 2510.6 2577.4 2167.1000000000004 3144.5 3905.6 4397.9 True False 2425.4430262311507 3153.2126338282956 3367.0983622769777 2734.8915986136085 2640.5825012463997 2776.270025598596 3045.6802175940147 2474.2930614654083 2432.2757707346614 3023.3222474429967 3305.7800541348083 0.7336976406513953 0.9538482845778913 1.0185488166599208 0.8273059773571012 0.7987774316514519 0.8398229707164241 0.9213196787803636 0.7484747989723661 0.735764549033568 0.9145563824373256 1.0 11.690775024608463 -4.413020495415044 20.281729741964973 0.8658418623495966 0.8686305703493438 0.0 0.09969531222756291 0.0 0.0 0.015372872366321772 0.0 3.8634874388502334e-05 4.413020495415044 0.0027887079997471753 QRS(ph)RDAVETNEK ddPTM_A549_MK2206_60min_R1 1 QRSRDAVETNEK 12 2 A0A0A0MTH9;O14981 A0A0A0MTH9 BTAF1 TATA-binding protein-associated factor 172 1 QRS(1)RDAVETNEK 55.213 0.0062225 3094700.0 889.32 1093.2 804.28 711.65 735.11 679.19 537.36 510.74 821.69 1356.0 1180.7 True False 1039.415474213515 1148.8392105652695 918.3389978677222 886.0042819471827 626.976292794329 751.0614349901658 634.9913562994957 583.1389590756504 635.5785269692999 1049.6786582170994 887.4996043377455 1.1711728874393466 1.2944672932249206 1.034748627919659 0.9983151289496308 0.7064524758432769 0.8462667829025229 0.7154835373400846 0.6570582749845734 0.7161451383897464 1.182737043584794 1.0 9.79360266610183 -6.200257427334405 1.7742046617281226 0.8259283626452378 1.230049998157478 0.4929206655533742 0.151494761816974 0.20519648942467467 1.2162245204920747 0.02013839252049571 0.07482086737509328 6.305834563816419e-07 6.200257427334405 0.4041216355122401 QRS(ph)SPVTK ddPTM_A549_MK2206_60min_R1 2 QRSSPVTK 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QRS(0.895)S(0.105)PVTK;QRS(0.5)S(0.5)PVTK 71.61399999999999 0.00502 23773000.0 3142.4 2467.5299999999997 1738.26 1457.33 3016.8999999999996 2048.16 2431.3 2555.9 3134.9 3455.2 4075.5 True False 3672.7602956962046 2593.116737327224 1984.7714060197275 1814.3759154220304 2573.1180064632654 2264.8949317414267 2873.0357387430486 2918.2066521154698 2424.8501554066133 2674.667920259382 3063.440871922146 1.1989003376427967 0.8464719398028341 0.6478895754806552 0.5922673200751566 0.8399437475836675 0.7393303890733578 0.9378459904598621 0.9525911464008282 0.7915446247490813 0.8730927189664249 1.0 11.580937290503876 -7.769642175764303 24.961703802652316 0.9061751350382844 0.7964082939564465 0.09113573946091591 0.15361877235773683 342.7514536586538 1043016.5571651608 0.02544784194962655 0.0354853703898239 1.6996434472281002e-08 7.769642175764303 -0.10976684108183787 QRS(ph)SPVTK ddPTM_A549_PD325901_60min_R1 1 QRSSPVTK 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QRS(0.982)S(0.018)PVTK 81.017 0.0031571999999999998 15651000.0 4320.0 4120.5 3127.5 2946.8 3751.3 2111.8 2113.2 2849.3 3359.7 4246.3 4279.7 True False 4758.563219784089 4467.748995896007 3339.7509571852966 3128.8171433316265 3487.8216292824477 2094.6022009650574 2193.6189823874106 2792.46847626739 3218.503492671466 3978.18789332191 3753.3240312535418 1.2678263800727099 1.1903446008640666 0.8898115189031203 0.8336123173161414 0.9292620621720152 0.5580659126479678 0.5844470032753292 0.7439987736243376 0.8575074962543388 1.0599105913041214 1.0 11.873953130736396 -5.733421142358982 3.6128450807211268 0.8603651272670385 1.252134627181502 0.5105974417363799 0.1496185392066732 0.15847506149035118 4.257840141552118 0.023035769183988867 0.09764498820029674 1.8474762225903646e-06 5.733421142358982 0.3917694999144634 QRSDDES(ph)PSTSSGSSDADQR ddPTM_A549_MK2206_60min_R1 1 QRSDDESPSTSSGSSDADQR 20 1 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(0.146)DDES(0.194)PS(0.194)T(0.194)S(0.194)S(0.027)GS(0.027)S(0.027)DADQR 53.251999999999995 0.008812200000000001 1949700.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QRSDQDS(ph)DSDQPSR ddPTM_A549_PD325901_60min_R1 1 QRSDQDSDSDQPSR 14 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 QRS(0.002)DQDS(0.882)DS(0.114)DQPS(0.002)R 50.787 0.006997 2054900.0 108.06 0.0 170.86 0.0 90.801 0.0 232.37 116.83 107.35 0.0 0.0 True False 119.0301716504325 0.0 182.45558706464578 0.0 84.42345100644451 0.0 241.21296750774295 114.49973399863802 102.8384528196809 0.0 0.0 0.0 QRSDQDSDS(ph)DQPSR ddPTM_A549_PD325901_60min_R1 1 QRSDQDSDSDQPSR 14 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 QRS(0.001)DQDS(0.451)DS(0.548)DQPS(0.001)R 52.453 0.0060882 2222000.0 177.28 202.36 112.49 188.97 180.44 180.46 186.23 117.88 261.32 217.48 383.89 True False 195.27733509336173 219.4135873824818 120.12424785732175 200.64224771799155 167.76651688420662 178.9903935913223 193.3170845589662 115.52879092492896 250.33762916477906 203.74827568463104 336.67396367921185 0.5800191168908594 0.6517094015370385 0.35679696328337995 0.5959541555436897 0.4983055863626483 0.5316431114402036 0.5741967167474872 0.34314738705190334 0.7435610001707902 0.6051797812282436 1.0 8.395208345976597 -9.407272248671593 1.0025113769469587 0.9476818603300067 0.5202315709354135 0.26816055727526156 0.14664489795183938 0.15906599196219728 0.3364927782935196 0.02877208486957198 0.021841398173994594 3.9149638058744914e-10 9.407272248671593 -0.4274502893945932 QRSS(ph)PVTK ddPTM_A549_PD325901_60min_R1 1 QRSSPVTK 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QRS(0.14)S(0.86)PVTK 98.04 0.0020307000000000003 16164000.0 4484.8 4349.3 3243.7 2977.3 3710.9 2427.5 2528.3 2981.6 2824.8 4261.6 4920.5 True False 4940.093594464736 4715.830774869678 3463.836987952658 3161.201059061102 3450.25918591001 2407.731244835061 2624.515840038846 2922.12964898005 2706.0834795066125 3992.521848710795 4315.309693619424 1.1447830967425376 1.092813983163818 0.8026856086538249 0.7325548531859079 0.799539182787166 0.5579509735755719 0.6081871351943593 0.6771540993455657 0.6270890553945182 0.9251993789956952 1.0 12.075248384603098 -5.75498040735206 3.9418428586014627 0.7686621280713276 1.133800851441362 0.5554348673411573 0.1275662805251898 0.15601696854177316 5.299554912111497 0.023127639423651578 0.09213556785527036 1.7580029222548656e-06 5.75498040735206 0.3651387233700344 QRST(ph)LPR ddPTM_A549_MK2206_60min_R1 1 QRSTLPR 7 1 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4 F8VV64 TNS2 Tensin-2 1 QRS(0.244)T(0.756)LPR 40.058 0.047268 15741000.0 1736.7 1600.6 903.58 1464.0 1846.3 1360.4 1498.4 1019.3 2171.4 2380.4 2059.3 True False 2029.812501761582 1682.0637032846423 1031.7212310306318 1822.6800657214578 1574.7117157788205 1504.3566250395652 1770.6398843962413 1163.7888964753306 1679.581367013275 1842.6659867404012 1547.9189762113303 1.311317021727926 1.0866613363715218 0.6665214697192107 1.177503534572998 1.017308877259886 0.9718574732649199 1.1438840867046156 0.7518409647795699 1.0850576760317263 1.1904150120638035 1.0 10.596114242140954 -5.321588945994372 4.381204052743856 1.009597041213656 1.318679417923028 0.24220893848250635 0.15732739049022954 0.17855561137781575 6.41893902115041 0.018469691457428074 0.14092843205587163 4.768821359274884e-06 5.321588945994372 0.309082376709372 QRVES(ph)LR ddPTM_A549_PD325901_60min_R1 1 QRVESLR 7 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23;A0A2R8YF29 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 QRVES(1)LR 53.327 0.012594 12805000.0 1761.2 2177.4 2427.2 2321.2 2445.5 2324.5 2453.5 2352.7 2726.7 2847.1 2535.3 True False 1939.9957274730853 2360.8971395859635 2591.924387939297 2464.575252172314 2273.7365165169995 2305.5700426855183 2546.8692851067153 2305.7735528425555 2612.1062813546705 2667.3336201108727 2223.4741725908607 0.8725065266724202 1.0618055153008472 1.1657092400219369 1.1084343962945675 1.0226053194346627 1.0369223403206869 1.1454458596831933 1.0370138683265195 1.1747859784271584 1.1996242875188485 1.0 11.118599931406155 QRVES(ph)LRK ddPTM_A549_PD325901_60min_R1 2 QRVESLRK 8 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23;A0A2R8YF29 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 QRVES(1)LRK;QRVES(1)LRK 56.358999999999995 0.0038916 31132000.0 2814.8 2674.8 3027.8 2465.0 3180.5 2902.2 3093.3999999999996 2772.1000000000004 3206.8 3221.3 3356.0 True False 3100.556423853759 2900.2147832114156 3233.284715640491 2617.257451578818 2957.112652129348 2878.565445421344 3211.1210297734306 2716.808290829621 3072.0293479473944 3017.9065682495034 2943.2332754368053 1.0534524904056766 0.9853839338579082 1.098548573306898 0.8892456719015555 1.0047156903288554 0.9780283029024045 1.0910181862145698 0.9230693039193162 1.0437600626445331 1.0253711771458605 1.0 11.523186176916099 QRVS(ph)GNTSR ddPTM_A549_MK2206_60min_R1 2 QRVSGNTSR 9 1 G3V4C1;G3V2Q1;G3V576;G3V575;G3V555;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 QRVS(1)GNTSR;QRVS(1)GNTSR 94.538 0.00026358 245640000.0 3741.9 4137.5 3097.9 2447.91 3817.2 2939.5 2445.7 2635.92 4486.1 5746.6 6483.900000000001 True False 4373.441239328419 4348.0810773086405 3537.228802773187 3047.6480598908543 3255.694936614261 3250.5559389178184 2890.0520323464266 3009.569732166442 3470.0055128296294 4448.439068812966 4873.768683463627 0.8973428004835795 0.8921394017039402 0.7257687084688219 0.6253165174275344 0.6680035816350123 0.6669491619384273 0.5929809599196164 0.6175036050393019 0.7119758318861392 0.9127308573150433 1.0 12.250822064828965 -10.470281612451956 0.8659943136901419 0.9948278295643502 0.707242474878346 0.468046697318674 0.099316957047556 0.3770125360956015 0.521769360299825 0.06521867512483698 0.020329714031671484 3.3862450839670515e-11 10.470281612451956 -0.2875853546860042 QRVS(ph)GNTSR ddPTM_A549_PD325901_60min_R1 4 QRVSGNTSR 9 1 G3V4C1;G3V2Q1;G3V576;G3V575;G3V555;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 QRVS(0.999)GNTS(0.001)R;QRVS(0.996)GNT(0.004)SR;QRVS(1)GNTSR;QRVS(1)GNTSR 90.79299999999999 0.00029325 277332000.0 8101.200000000001 9596.0 8248.0 6621.5 8728.699999999999 7622.5 6201.499999999999 6545.799999999999 7941.299999999999 10011.8 10077.7 True False 8923.627860211765 10404.68859716493 8807.758879253186 7030.4950164824095 8115.626224380265 7560.424887231825 6437.501476091013 6415.23888391924 7607.554777614643 9379.653239375526 8838.206787803781 1.0096649778013636 1.1772397780421706 0.9965549676216433 0.7954662280796699 0.9182435327921229 0.8554252088404152 0.7283719006183919 0.7258529968739701 0.8607577261161883 1.061262025722108 1.0 13.109537970933399 -6.0067586746226045 7.175944102916029 0.8892654898698783 1.0926976153596182 0.4113888458472278 0.1044866954238639 0.10319239918119848 33.99886974162102 0.015150161615036857 0.04407526807808812 9.845580453388744e-07 6.0067586746226045 0.20343212548973988 QRYDENEDLS(ph)DVEEIVSVR ddPTM_A549_MK2206_60min_R1 3 QRYDENEDLSDVEEIVSVR 19 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;F5H0A1 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 QRYDENEDLS(1)DVEEIVSVR;QRYDENEDLS(1)DVEEIVSVR;QRY(0.003)DENEDLS(0.996)DVEEIVS(0.001)VR 118.35 1.3578999999999999e-14 4186700.0 244.67 0.0 170.68 412.59000000000003 175.86 329.03000000000003 131.86 167.3 230.15 304.40999999999997 429.45000000000005 True False 285.9643143928179 0.0 194.88499049592542 513.6745685218691 149.99122696033336 363.8477362075626 155.81725517651387 191.01528733476206 178.0213924740285 235.64356957807303 322.80571278296327 0.8858712936876818 0.0 0.603722247712993 1.5912809104070458 0.46464861376595024 1.1271415647225356 0.48269670890637795 0.5917345318581465 0.5514815426879395 0.7299857476082114 1.0 8.334522300393893 -10.955470917753953 1.2409382805412483 0.998638199695605 0.6850194408868426 0.008195633333084484 0.3947336678157801 0.9945305341152798 2.7418987260834764 0.2608940848674863 0.0618241274551767 1.1079727575614838e-11 10.955470917753953 -0.31361875880876233 QRYDENEDLS(ph)DVEEIVSVR ddPTM_A549_PD325901_60min_R1 3 QRYDENEDLSDVEEIVSVR 19 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;F5H0A1 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 QRYDENEDLS(1)DVEEIVSVR;QRYDENEDLS(1)DVEEIVSVR;QRYDENEDLS(1)DVEEIVSVR 121.35 8.948200000000001e-15 13275700.0 2331.58 2113.73 1852.42 2193.09 2554.3500000000004 1848.11 2293.7 2469.58 2754.82 2167.7799999999997 2318.37 True False 2568.2802851815227 2291.861445236079 1978.1363607063745 2328.5521884312343 2374.941268029113 1833.059604898918 2380.9880086608005 2420.32228955197 2639.044495544605 2030.90600084435 2033.2251873582911 1.2631558477388394 1.1272049252025182 0.9729056933809226 1.1452505127858723 1.1680660277058654 0.9015526741927478 1.1710399927488342 1.1903857499899568 1.2979597695095628 0.9988593558016294 1.0 10.989554292610967 QS(ph)GDGQESTEPVENK ddPTM_A549_MK2206_60min_R1 2 QSGDGQESTEPVENK 15 0 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 QS(1)GDGQESTEPVENK;QS(0.967)GDGQES(0.032)T(0.001)EPVENK 210.39 2.2485e-45 38712000.0 3048.3999999999996 2766.6400000000003 2483.56 2507.7 3731.2 3424.0 4042.1000000000004 3805.1000000000004 4705.2 3672.3999999999996 3665.2 True False 3562.895393775556 2907.4501587251166 2835.7661530118385 3122.086612574929 3182.3454226907506 3786.3254073327466 4776.497248210126 4344.4845776300235 3639.479712660433 2842.802289407429 2755.029685626073 1.2932330320665484 1.0553244394767407 1.0293051170399343 1.1332315687427679 1.1551038594226877 1.3743319816433537 1.7337371256399656 1.5769284085382735 1.3210310334036823 1.0318590410256903 1.0 11.427852148676228 -4.033011975034786 17.07052435368109 1.2189721720512439 11.845647610417185 0.0 0.23165960571348646 0.0 0.0 0.034051328485394994 0.0 9.268042677556352e-05 4.033011975034786 10.626675438365941 QS(ph)GDGQESTEPVENK ddPTM_A549_PD325901_60min_R1 2 QSGDGQESTEPVENK 15 0 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 QS(0.91)GDGQES(0.084)T(0.006)EPVENK;QS(1)GDGQESTEPVENK 219.68 3.1872e-46 36505000.0 3894.8999999999996 4190.2 4505.6 2824.8 4834.9 3635.3 3962.5 3615.4 4169.9 4555.6 3842.0 True False 4290.307380726164 4543.322859508181 4811.377110373803 2999.281480413733 4495.313303499508 3605.6953220798746 4113.2951058632025 3543.288010773568 3994.6536042178627 4267.95863853644 3369.458356444636 1.27329289365463 1.3483837397243206 1.4279378467970267 0.8901375720157277 1.3341352905880233 1.0701112584411072 1.2207585524824363 1.0515897915747956 1.1855476998483863 1.2666601533665718 1.0 11.718300980141802 -2.000000000000005 0.0848955594260293 0.8898443247679121 2.048993668190501 0.09046590197048288 0.15100106882335204 129.8840673734778 0.7752598306693088 1.46036768802572 17.613602823090748 0.009999999999999887 2.000000000000005 1.1591493434225888 QS(ph)KLSPQMQVHQDK ddPTM_A549_PD325901_60min_R1 1 QSKLSPQMQVHQDK 14 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;J3KSK9 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 QS(0.5)KLS(0.5)PQMQVHQDK 41.202 0.021979 3819200.0 1390.7 1406.9 1575.7 1534.4 1718.8 1698.9 1838.8 1928.0 1769.1 1758.3 1729.7 True False 1531.88284022077 1525.4644005159794 1682.636477453836 1629.176403124763 1598.077417538098 1685.0647216684997 1908.7765402299678 1889.5445275132588 1694.7508792109693 1647.280637926644 1516.9578654717045 1.009838753658741 1.005607627764684 1.1092176755552885 1.073976041264774 1.0534751517578698 1.1108184083573882 1.258292391421449 1.2456143776450224 1.1172036598946533 1.0859106079485044 1.0 10.566965298975301 -5.754025535360419 24.52426304048476 1.090100406519309 1.0077231340109098 0.1694580918950317 0.07612694416810994 237.09154442408195 784249.0545022616 0.01278231757933942 0.04753365259212636 1.7618724499521543e-06 5.754025535360419 -0.0823772725083991 QS(ph)LGESPR ddPTM_A549_PD325901_60min_R1 1 QSLGESPR 8 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 QS(0.952)LGES(0.048)PR 82.26100000000001 0.0035692 9501500.0 1854.8 1180.2 1317.8 1297.3 1547.7 1365.5 1687.6 1398.1 1515.7 1138.8 1895.2 True False 2043.0979305684077 1279.6595959122608 1407.2338325751502 1377.4312746179316 1438.994891275143 1354.3798207300817 1751.822541490155 1370.2137987117674 1452.0003999887315 1066.8959736511758 1662.1024146626432 1.2292250540909628 0.7699041795640452 0.8466589183439556 0.8287282795973248 0.8657678844460469 0.8148594267008391 1.0539799028242927 0.8243859022308679 0.8735926181079785 0.6418954477409405 1.0 10.698793564829144 -10.754890103870801 0.920584601565534 1.002521528077059 0.8912324755662342 0.0 0.16446301191012022 1.1620255515586957 1.6864264971889593 0.08852456304031843 0.02068785877500633 1.7583685043579203e-11 10.754890103870801 -0.11128905251082477 QS(ph)MSEKR ddPTM_A549_MK2206_60min_R1 2 QSMSEKR 7 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QS(0.984)MS(0.016)EKR;QS(0.997)MS(0.003)EKR 79.97399999999999 0.0067248 35416000.0 4039.5 3827.1000000000004 3693.5 2727.9 3057.1000000000004 2740.56 2419.09 2032.8200000000002 3343.4 6291.2 6262.4 True False 4721.268843706984 4021.883043134233 4217.293838743264 3396.2356224600835 2607.4046397158822 3030.5642401635027 2858.6073397918485 2320.9784602501545 2586.125238312696 4870.013550571843 4707.273246552635 1.0029731856260093 0.8543976167263401 0.8959101411484437 0.7214868235973579 0.5539097696581373 0.6438046149929648 0.6072745706626115 0.49306219092973197 0.5493892329718997 1.0345720963061555 1.0 12.200675885300187 -6.239002945310368 4.812942019724144 0.71844335432046 0.9146241636650625 0.2422244952694631 0.16924572038909402 0.29296560622935636 18.65620291117607 0.02844947084315015 0.07504260017602135 5.767625518747091e-07 6.239002945310368 0.19618080934460247 QS(ph)MSEKR ddPTM_A549_PD325901_60min_R1 3 QSMSEKR 7 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QS(1)MSEKR;QS(0.982)MS(0.018)EKR;QS(0.834)MS(0.166)EKR 91.584 0.0051798 103329000.0 16236.9 18938.9 18031.5 15164.699999999999 18573.8 12855.0 14918.0 15087.8 17310.899999999998 20256.399999999998 20039.1 True False 17885.25813502598 20534.947569075328 19255.226022217965 16101.389077467475 17269.240364131434 12750.313142061663 15485.712653442832 14786.861992849881 16583.38307327633 18977.40744702114 17574.417738321117 1.0176870950339978 1.168456780465549 1.095639486264847 0.9161833590855363 0.9826351359838089 0.7255041579135525 0.8811508229758388 0.8413855988302272 0.9436092461325857 1.0798313622442692 1.0 14.101189271410446 -6.255246038933452 22.56816381298342 0.9367182011863274 1.1013807524008206 0.3975942287642025 0.09312147081118667 103.2062953117121 376070.1194602014 0.012702313058146402 0.03261208432133539 5.555894124806067e-07 6.255246038933452 0.16466255121449314 QS(ph)PASPPPLGGGAPVR ddPTM_A549_MK2206_60min_R1 1 QSPASPPPLGGGAPVR 16 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 QS(0.997)PAS(0.003)PPPLGGGAPVR 106.82 7.714499999999999e-07 99168000.0 1747.3 2093.9 1502.6 1277.9 2060.8 1534.8 1753.8 1783.7 2363.3 2383.2 2411.0 True False 2042.2015226164656 2200.470566229984 1715.6912744268652 1590.9855573671102 1757.659049925252 1697.211517282215 2072.4427584450927 2036.5449373521526 1828.0163234146055 1844.8334647957165 1812.282159785131 1.1268673101425855 1.2141986579456687 0.9467020712879953 0.8778906467609556 0.9698594892826429 0.9365051176597363 1.1435541354613386 1.1237460603781537 1.0086819613295426 1.017961499446888 1.0 10.823591875163272 -5.758729965506028 24.999989382490543 1.0033767201521757 1.1705330167572474 0.4232372728244417 0.07553334854414023 49.697839395208696 458538.63631504716 0.010728336576484225 0.03812455097081451 1.7428902263086535e-06 5.758729965506028 0.1671562966050717 QS(ph)PDTFSLMMAK ddPTM_A549_PD325901_60min_R1 1 QSPDTFSLMMAK 12 0 O15055;E9PD89;O15055-2 O15055 PER2 Period circadian protein homolog 2 1 QS(0.995)PDT(0.003)FS(0.003)LMMAK 52.343999999999994 0.025034 604650.0 1509.6 1373.8 1118.1 1250.3 1364.4 1185.9 1315.2 1365.9 1405.9 1585.5 1440.3 True False 1662.8534806912162 1489.5749473515189 1193.9809896814966 1327.5281913626764 1268.5692509244705 1176.2424235838914 1365.2506557050542 1338.6560529721794 1346.814912148946 1485.3912594168764 1263.1522308139542 1.3164315750126976 1.179252121014473 0.9452391885593355 1.0509645306229158 1.0042884934835017 0.9311960940970198 1.080828282134537 1.0597741272321324 1.0662332530427316 1.175940019881622 1.0 10.302812802968663 -5.537071032241585 4.002842069586789 1.0257685751839656 1.2961930501323444 0.6357935735902349 0.06519917883886395 0.06585065110510684 2.3270655039824386 0.006648310227984679 0.03490910504114681 2.9035477178051417e-06 5.537071032241585 0.27042447494837885 QS(ph)PECENFLDVGLGR ddPTM_A549_MK2206_60min_R1 1 QSPECENFLDVGLGR 15 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;A0A087X047;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 QS(1)PECENFLDVGLGR 55.885 0.013236000000000001 1521500.0 528.38 757.5 777.79 761.02 765.62 856.88 668.17 1098.9 1041.2 917.79 825.84 True False 617.557626349275 796.053514455902 888.0923175405783 947.4699341634864 652.9983122106813 947.5544728490903 789.5678400674298 1254.672440240108 805.3698624547405 710.4606015671621 620.761135975509 0.9948393843612652 1.2823829784461713 1.4306506417238343 1.5263035638894558 1.051931692187064 1.5264397494215463 1.2719350395972289 2.0211839426262164 1.2973909218545456 1.1444991646435676 1.0 9.277894427244158 -9.978048529265514 1.1749963292527292 1.0456706676987415 1.3831207216329753 0.16253470295072592 0.26234975014498163 0.4559780397874456 1.2676106794804363 0.08169383416911896 0.04766172812058569 1.0518443312638934e-10 9.978048529265514 0.3374500539342338 QS(ph)PGPALAR ddPTM_A549_MK2206_60min_R1 2 QSPGPALAR 9 0 P85037 P85037 FOXK1 Forkhead box protein K1 1 QS(1)PGPALAR;QS(1)PGPALAR 104.3 0.00061545 218330000.0 8860.8 9376.8 8574.9 8338.1 12196.9 11276.6 11327.6 12106.0 15806.5 14337.0 14621.099999999999 True False 10356.286414239097 9854.039068448981 9790.949759804958 10380.934874311532 10402.752167135726 12469.882327198728 13385.678293170635 13822.062573070112 12226.352987793753 11098.261742521063 10990.277348168547 0.9423134727318687 0.8966142305854627 0.8908737650225498 0.9445562241467402 0.9465413690282595 1.1346285386762096 1.2179563689902024 1.2576627627485182 1.1124699223201304 1.0098254476144326 1.0 13.423940173823722 -7.1585156505855885 4.884743109696394 1.0900750449413135 0.9187455747433438 0.6113476581358006 0.07641459298722651 0.1697956353749746 6.438017704157188 0.013863519293973631 0.024346444523998055 6.941995845282429e-08 7.1585156505855885 -0.17132947019796962 QS(ph)PGPALAR ddPTM_A549_PD325901_60min_R1 2 QSPGPALAR 9 0 P85037 P85037 FOXK1 Forkhead box protein K1 1 QS(1)PGPALAR;QS(1)PGPALAR 117.21 0.00018173 349630000.0 11149.0 11649.3 11336.099999999999 9438.2 12790.7 10133.900000000001 11089.8 10902.2 11409.900000000001 11650.6 11843.4 True False 12280.838272539988 12631.027394221905 12105.435915507023 10021.17617829258 11892.325357519525 10051.372878283832 11511.82840757141 10684.74706838955 10930.381581996064 10914.979127696168 10386.736881498278 1.1823576944955292 1.2160727221964527 1.1654705470656752 0.964805048267193 1.1449529812104056 0.9677122847107232 1.1083200180103954 1.0286914158210854 1.0523402784435765 1.05085738208492 1.0 13.342454864947417 -6.1240327984447935 5.393726300982147 1.0329380077565746 1.1971766268648887 0.6188289048225512 0.05193696048100925 0.09470086599509936 3.7656903269061663 0.0066211150101372525 0.018052784026760346 7.515661326911132e-07 6.1240327984447935 0.16423861910831405 QS(ph)PIS(ph)CGFKET(ph)RVK ddPTM_A549_PD325901_60min_R1 1 QSPISCGFKETRVK 14 2 Q7Z5M8-4 Q7Z5M8-4 3 QS(1)PIS(1)CGFKET(1)RVK 40.349000000000004 0.037025 20752000.0 2778.6 2354.0 2690.0 3023.1 3845.4 3717.8 2950.1 3051.0 3573.8 2714.9 2916.3 True False 3060.681426502793 2552.379841363719 2872.5595762840762 3209.8300210417538 3575.312369909821 3687.5234694326614 3062.3676698566633 2990.145411536802 3423.6056142242724 2543.480750672268 2557.6135879488525 1.1966942312647741 0.9979536601581278 1.1231405673707744 1.2550097622901526 1.397909514852531 1.4417828740071603 1.1973535346723787 1.1691153916392938 1.3385937697374863 0.9944742093398407 1.0 11.320582598584412 -4.022697793331625 13.242003633887308 1.191379878875727 1.208732199198388 0.0 0.1504855423397605 0.0 0.0 0.022062346622856315 0.0 9.490786561924587e-05 4.022697793331625 0.017352320322660875 QS(ph)PLTYEDHGAPFAGHLPR ddPTM_A549_MK2206_60min_R1 4 QSPLTYEDHGAPFAGHLPR 19 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 QS(0.721)PLT(0.277)Y(0.001)EDHGAPFAGHLPR;QS(0.959)PLT(0.04)YEDHGAPFAGHLPR;QS(0.933)PLT(0.066)YEDHGAPFAGHLPR;QS(0.901)PLT(0.099)YEDHGAPFAGHLPR 130.6 1.9991e-16 49654700.0 5735.37 6914.950000000001 5681.38 5821.98 9104.0 7531.719999999999 6707.4 7275.39 9373.6 10063.3 8890.0 True False 6703.360239666223 7266.891418860517 6487.085114270806 7248.365361358616 7764.813659995873 8328.721611248891 7926.047758008111 8306.698812447425 7250.4945665633395 7789.993540734611 6682.36764848188 1.003141490006033 1.08747255480794 0.97077644564267 1.084700175544116 1.1619854022488432 1.2463728500692468 1.1861136912765902 1.2430771920091175 1.085018805903403 1.1657535099111713 1.0 12.706143643277878 -4.362080051592132 15.138937537439332 1.0803206572689326 1.0881916039805133 0.0 0.09710512477165845 0.0 0.0 0.013986897558695139 0.0 4.3443014019360634e-05 4.362080051592132 0.007870946711580729 QS(ph)PLTYEDHGAPFAGHLPR ddPTM_A549_PD325901_60min_R1 3 QSPLTYEDHGAPFAGHLPR 19 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 QS(0.918)PLT(0.082)YEDHGAPFAGHLPR;QS(0.907)PLT(0.093)YEDHGAPFAGHLPR;QS(0.978)PLT(0.022)YEDHGAPFAGHLPR 182.03 3.0309999999999997e-43 44144100.0 2336.3900000000003 2373.75 2376.7200000000003 2387.2200000000003 2801.25 2521.0699999999997 2316.6499999999996 2663.84 2336.55 2551.33 2677.33 True False 2573.5785928405885 2573.794243176349 2538.018511578399 2534.673157630016 2604.4998637878734 2500.5392417780936 2404.811383469522 2610.707621457946 2238.3529290715005 2390.2385883872985 2348.035382993212 1.0960561376037954 1.0961479804854328 1.080911527126564 1.0794867811569702 1.1092251346177449 1.0649495573573826 1.024180215037447 1.1118689438699543 0.9532875634174255 1.0179738370638551 1.0 11.197238433520708 -8.763377922386756 24.99999955856412 0.9779413457482706 1.0814460036895577 0.6842403751128564 0.027600185998566888 17.841388429148033 230086.41812833815 0.004733345010662211 0.005165651841981248 1.724336723776508e-09 8.763377922386756 0.10350465794128705 QS(ph)PS(ph)PSTRPIR ddPTM_A549_MK2206_60min_R1 3 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 QS(0.994)PS(0.718)PS(0.223)T(0.065)RPIR;QS(0.955)PS(0.786)PS(0.125)T(0.134)RPIR;QS(0.99)PS(0.648)PS(0.36)T(0.002)RPIR 74.53699999999999 0.004419 45693000.0 9391.400000000001 10067.3 10526.3 7919.7 11712.9 7949.599999999999 7719.1 8598.2 12185.900000000001 14014.3 17365.1 True False 10976.438722314579 10579.682569085022 12019.087622786854 9860.026855528848 9989.947925984801 8790.821395482591 9121.560552351191 9817.021180883148 9425.813106883617 10848.459896645947 13052.866417621222 0.8409217080086341 0.8105256141135843 0.9208006301635955 0.7553916925264724 0.7653451438450702 0.6734782318476102 0.6988166629850121 0.7520969622143899 0.7221259151291762 0.8311170550248372 1.0 13.672079037868707 -10.774109897621255 0.9887633566153586 1.0019296015464698 0.7684035879259113 0.24155559824288642 0.08096045591839414 0.31208075234260063 0.5345184793696592 0.05168361519244332 0.012643020603271122 1.6822483165832047e-11 10.774109897621255 -0.23352601362055847 QS(ph)PS(ph)PSTRPIR ddPTM_A549_PD325901_60min_R1 3 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 QS(0.982)PS(0.712)PS(0.213)T(0.093)RPIR;QS(0.993)PS(0.971)PS(0.021)T(0.015)RPIR;QS(0.98)PS(0.872)PS(0.13)T(0.019)RPIR 66.32600000000001 0.0084199 63299000.0 7124.999999999999 7910.700000000001 7348.2 6316.900000000001 8962.7 6636.9 8492.5 7427.1 9203.5 7124.5 7308.5 True False 7848.324754852222 8577.362451604062 7846.893040316222 6707.080566279203 8333.190871636436 6582.851286857179 8815.686734774317 7278.960664052765 8816.708901033384 6674.6578541252275 6409.60083239865 1.2244638878572978 1.3382054009117095 1.2242405175455673 1.046411585004932 1.3001107384900794 1.0270298352407219 1.3753877917348003 1.135634005047515 1.3755472659806691 1.0413531245794265 1.0 12.646018798284514 -11.04811557238622 1.356784575347111 1.0002904799446777 1.2411115666880739 0.3185740157938699 0.11502367214096196 0.36845828587552965 1.2118246370062975 0.08045021829354415 0.018040406346951292 8.9512652702874e-12 11.04811557238622 0.2408210867433962 QS(ph)PSFK ddPTM_A549_MK2206_60min_R1 1 QSPSFK 6 0 Q6IN85-4;Q6IN85-2;Q6IN85 Q6IN85-4 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 QS(1)PSFK 96.311 0.03506 62880000.0 12965.0 14225.0 12778.0 11617.0 15791.0 13677.0 13170.0 13998.0 17800.0 17728.0 16331.0 True False 15153.175036182953 14948.991740112486 14590.112541346003 14463.165521506951 13468.164818211211 15124.291061942164 15562.818524758735 15982.259367077091 13768.328420759095 13723.232487369281 12275.561987329314 1.2344180292375921 1.2177847136890885 1.1885494575650173 1.1782080149516294 1.0971526054866478 1.2320650637057002 1.2677886797217501 1.301957448756626 1.121604732636322 1.1179310976991714 1.0 13.58350145360255 -9.48008490394237 1.1673286159601641 1.027403941516804 1.2090176684048846 0.45664568373092884 0.061365886753592336 0.19271866862945836 0.5448975903427831 0.01581354153800352 0.012076820840430654 3.3106639215525804e-10 9.48008490394237 0.18161372688808064 QS(ph)PSFK ddPTM_A549_PD325901_60min_R1 2 QSPSFK 6 0 Q6IN85-4;Q6IN85-2;Q6IN85 Q6IN85-4 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 QS(0.983)PS(0.017)FK;QS(0.998)PS(0.002)FK 101.25 0.032429 200389000.0 24878.0 24516.0 27089.0 22389.0 30515.0 20955.2 25068.0 25368.0 27527.0 26701.0 24395.0 True False 27403.596245784363 26582.049358909495 28927.422439390077 23771.917680891744 28371.73167103508 20784.547798874417 26021.97645773594 24862.015339188973 26370.135917721076 25015.094303178845 21394.569652646263 1.2808669064486116 1.2424671208855842 1.3520918115692075 1.111119226366464 1.326118362353964 0.9714870706129677 1.2162888471335678 1.1620712985976713 1.2325621101922652 1.1692263368375237 1.0 14.384957039289665 -14.999999999999998 0.19965094021925078 0.01957503950104759 1.251222520004742 0.12749557877009 0.1089080632941119 34.60075336761377 0.40676982561360714 13.327847600923679 0.08101704956770321 1.000000000000004e-15 14.999999999999998 1.2316474805036943 QS(ph)PSPS(ph)TRPIR ddPTM_A549_PD325901_60min_R1 1 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 QS(0.951)PS(0.153)PS(0.8)T(0.096)RPIR 58.326 0.036552999999999995 18786000.0 3048.7 3128.8 3130.1 2932.8 3627.6 3459.5 2736.6 2586.8 4877.4 3205.6 3409.2 True False 3358.201779665683 3392.474956524554 3342.5274088203646 3113.952395127933 3372.8098905406146 3431.3269789935694 2840.7428105249787 2535.2042446946566 4672.419839615385 3003.1978689288803 2989.8900126993904 1.1231857243583907 1.1346487469823996 1.1179432670175715 1.041493961952311 1.128071559895111 1.1476432124322968 0.9501161576041536 0.8479255872043849 1.562739706065957 1.0044509517651037 1.0 11.54587669849961 -8.746975197961257 24.999884158950998 1.2657382364328746 1.066433437117541 0.0541116206856761 0.16785195541361744 329.4901660622008 569490.1309995853 0.036136952762331885 0.04088579940054081 1.790708116315291e-09 8.746975197961257 -0.19930479931533363 QS(ph)PSPSTR ddPTM_A549_PD325901_60min_R1 1 QSPSPSTR 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QS(0.981)PS(0.019)PSTR 62.463 0.010351 4665700.0 580.55 322.64 620.6 473.4 585.77 388.37 421.77 538.06 559.61 462.66 579.45 True False 639.4870086216783 349.8300051051783 662.7176479709659 502.6408428305934 544.6275359967954 385.207243483663 437.82068815139974 527.3279712000957 536.0915377961959 433.44756864195057 508.18132343619084 1.2583835318811647 0.6883960290782003 1.3040968201858352 0.9890974336322828 1.0717189138596528 0.7580114138768247 0.8615442322653051 1.0376768033001296 1.0549217633014991 0.8529388008813273 1.0 8.989199544542 -4.93207038550108 20.616592962771442 1.0013506055553143 7.723338076137172 0.17673492189787066 0.1650550358253103 557.4502831166418 170850.81417438848 0.0194378762160587 1683.3209142771607 1.1693098672427183e-05 4.93207038550108 6.721987470581858 QS(ph)PSPSTRPIR ddPTM_A549_MK2206_60min_R1 3 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QS(0.989)PS(0.011)PSTRPIR;QS(0.499)PS(0.499)PS(0.001)T(0.001)RPIR;QS(0.937)PS(0.062)PS(0.001)TRPIR 95.854 7.9072e-05 110543000.0 6773.299999999999 6911.799999999999 7005.0 6182.2 9013.6 6705.200000000001 6518.5 6796.200000000001 9758.5 9488.2 9914.4 True False 7916.467448714077 7263.581097315252 7998.414333395582 7696.839277529503 7687.711380243721 7414.739813448463 7702.8270731693165 7759.582162489598 7548.215331122342 7344.809030158915 7452.38085648017 1.062273601037226 0.9746658466870023 1.073269668771774 1.0328027278472711 1.0315778981637687 0.9949491251511956 1.033606202032921 1.0412219010173511 1.0128595782324838 0.9855654416497358 1.0 12.86348569025066 -9.337904481898768 0.47106653621748007 0.9987747554009883 1.031538689041959 0.21488726670093894 0.026488373824577763 1.146280260767013 0.5993813458597431 0.014414321528504059 0.008429966833146079 4.5929901929193343e-10 9.337904481898768 0.03276393364097063 QS(ph)PSPSTRPIR ddPTM_A549_PD325901_60min_R1 3 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QS(0.975)PS(0.025)PSTRPIR;QS(0.719)PS(0.264)PS(0.008)T(0.009)RPIR;QS(0.975)PS(0.015)PS(0.005)T(0.005)RPIR 87.573 1.8982e-05 106718000.0 20028.1 18228.6 18765.6 19889.6 23068.7 22215.0 20651.6 20712.0 23626.1 21679.0 22068.3 True False 22061.337968092044 19764.788095277272 20039.146462719866 21118.135419440994 21448.434094694636 22034.088405359784 21437.507938989136 20298.882911750334 22633.1771789759 20310.184240238723 19354.039002479738 1.1398828929333786 1.021222913353895 1.0353986813890552 1.0911487476456585 1.108214884342568 1.1384749406848185 1.1076503429719478 1.0488189524238087 1.1694291396269287 1.0494028785224871 1.0 14.240347053969819 -4.898551953390387 15.200184356019985 1.0817168611359051 3.166263222981358 0.11109111091271606 0.049531970792717255 2043530.906601112 3225415.5043162666 0.008791208940743813 143406054.0057431 1.2631299901884202e-05 4.898551953390387 2.0845463618454527 QS(ph)PSQNER ddPTM_A549_MK2206_60min_R1 1 QSPSQNER 8 0 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 QS(0.965)PS(0.035)QNER 74.84100000000001 0.0049503 9823600.0 753.99 663.57 413.32 263.24 170.13 183.16 0.0 0.0 193.1 1193.9 941.22 True False 881.2450787143522 697.3428786633702 471.93499104626164 327.7338118172926 145.10410236984825 202.54186962823198 0.0 0.0 149.3631583173361 924.1971608004386 707.4890976495062 1.2455952772164491 0.9856588334437311 0.6670562028647128 0.463235140875137 0.20509729810950894 0.2862826724837706 0.0 0.0 0.21111725793876668 1.3063058694061893 1.0 9.466564106075174 -10.894010211466572 1.207465401643252 0.992584443730102 0.4183188855022658 0.3058316052995418 0.38660132358478466 0.5859740391095317 1.5479005133841353 0.2701814703490825 0.06821591249879216 1.2764087965511487e-11 10.894010211466572 -0.5742655582278362 QS(ph)PSQNER ddPTM_A549_PD325901_60min_R1 1 QSPSQNER 8 0 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 QS(0.969)PS(0.031)QNER 71.03 0.0063178999999999996 22383000.0 1036.7 1113.6 780.7 425.87 836.84 543.63 613.67 650.22 822.48 932.62 847.9 True False 1141.9450208217966 1207.4469801795394 833.6829967304752 452.1750226790554 778.0632453412742 539.2028575199522 637.0235476631091 637.2508520122777 787.9140258512447 873.7342140380752 743.6136752809496 1.5356697419400616 1.6237557488750405 1.12112380990774 0.6080778739151297 1.046327241154231 0.7251115403656777 0.856659269240081 0.8569649445614537 1.059574416182647 1.174984058366011 1.0 9.538409491875306 -5.855327094559407 4.3881278502131 0.9587457401419439 1.580379288344269 0.71633416433508 0.1576309821198812 0.07912072391374299 2.6934041790382635 0.021069785970926194 0.07204124498467145 1.3953170639419076e-06 5.855327094559407 0.6216335482023252 QS(ph)PSSS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 QS(0.986)PS(0.015)S(0.28)S(0.701)PT(0.019)R 93.345 0.0011277999999999998 11634000.0 418.54 306.53 280.99 353.32 1189.2 584.93 435.43 518.14 942.3 421.17 433.47 True False 489.1793196794453 322.13106770451157 320.83860721496404 439.8834158611375 1014.2702553237143 646.8269043548898 514.5419947027864 591.5879317372004 728.8705545438928 326.0274044847313 325.82743583660726 1.5013447790957486 0.9886554423429544 0.9846887398882365 1.3500502642807708 3.1129062312368947 1.985182440803586 1.5791855998302544 1.8156479985125136 2.23698336719993 1.0006137256293675 1.0 8.347964278840474 -6.534622480430468 24.966710749548668 1.751619208272535 1.1456214131873614 0.21438512740721805 0.5627112103004703 305.2274646993534 648900.289182207 0.09060569929304846 0.18872365118295042 2.9199641510739275e-07 6.534622480430468 -0.6059977950851736 QS(ph)PSSS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 QS(0.993)PS(0.19)S(0.218)S(0.476)PT(0.122)R 56.086999999999996 0.018788 14151000.0 519.17 878.04 512.39 641.24 963.82 520.49 314.75 604.75 830.15 814.12 619.38 True False 571.8757562072461 952.035512281648 547.1638666513744 680.8479384382969 896.1246081984925 516.2513020079097 326.72798348780873 592.6877868328025 795.261682424389 762.7163242614115 543.2001865733157 1.0527900585138332 1.7526420936771012 1.007296904853923 1.2534015180173412 1.6497133659904268 0.9503886684292058 0.6014872445992989 1.09110379834674 1.4640305767219257 1.4041164622436442 1.0 9.085340164880844 -7.284044163577833 24.955024410957428 1.1452933574894855 1.3422707646271619 0.13862162681994272 0.30048028109401564 1638.9736203216892 1809375.053514758 0.048161954191495965 0.07702657906699842 5.199431206232568e-08 7.284044163577833 0.19697740713767642 QS(ph)RGEPPLPEEDLSK ddPTM_A549_MK2206_60min_R1 2 QSRGEPPLPEEDLSK 15 1 A0A087WZK9;B3KS98;O15372 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 QS(1)RGEPPLPEEDLSK;QS(1)RGEPPLPEEDLSK 85.087 3.783e-05 8552500.0 1402.98 1753.27 1523.8200000000002 1398.48 2153.3 1751.77 1504.6599999999999 1775.68 2105.63 2602.6000000000004 2284.7 True False 1639.7687244322367 1842.5039541783497 1739.920589509614 1741.1076627801524 1836.5524224592612 1937.141138669185 1778.0372453654898 2027.3880777919333 1628.7081670001674 2014.6708524157991 1717.3459354877994 0.9548272660432113 1.0728787462701859 1.01314508251094 1.0138363079920782 1.069413205870838 1.1279853980723775 1.0353401773187016 1.1805356369368114 0.9483867713219614 1.1731304746376257 1.0 10.745964964155327 QS(ph)RGEPPLPEEDLSK ddPTM_A549_PD325901_60min_R1 1 QSRGEPPLPEEDLSK 15 1 A0A087WZK9;B3KS98;O15372 A0A087WZK9 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 QS(1)RGEPPLPEEDLSK 74.69800000000001 0.00019891 6281400.0 1686.0 2175.6 1843.7 1660.0 2026.6 1883.4 1767.8 2239.9 2093.4 1799.3 1875.0 True False 1857.1614788324007 2358.9454472688626 1968.8245690687556 1762.5344298664659 1884.2586073904522 1868.0622148392808 1835.0745963772772 2195.2234373324445 2005.4216779945978 1685.6918909295412 1644.3868866042922 1.129394483720005 1.4345440641041325 1.1973000910597364 1.0718489938253837 1.1458730440751095 1.1360235416963735 1.115962801288668 1.3349798975018867 1.2195558687139942 1.0251187872280745 1.0 10.68333405674688 -10.664368262620526 0.9099123867614621 0.9986629884751957 1.1995710200532073 0.33617874911611956 0.10006169454115775 0.5385387379276486 0.7868035512941303 0.0712073785145595 0.018521375621607553 2.1658667661749937e-11 10.664368262620526 0.20090803157801151 QS(ph)SEEEEKETR ddPTM_A549_MK2206_60min_R1 1 QSSEEEEKETR 11 1 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 QS(0.5)S(0.5)EEEEKETR 83.69200000000001 0.0001631 8952000.0 1847.1 2006.4 2109.8 1799.0 439.82 407.52 334.94 223.51 679.97 2830.2 3021.0 True False 2158.8453227407276 2108.517189972701 2409.001364824838 2239.7550807601797 375.12306062603096 450.643495910117 395.7942624664154 255.19322697066738 525.9578806889646 2190.855854340732 2270.802324641591 0.9506971607849952 0.9285340106851864 1.0608591239684677 0.9863276325092226 0.16519406227278635 0.198451221852278 0.1742971011485489 0.11238020333229377 0.23161764235553986 0.9647937341646516 1.0 11.148986408288685 -6.732637262829881 23.936622994781576 0.4924079827693329 0.9834754420111583 0.44181000305011664 0.3012088115158238 140.62220016243745 116865.85223777738 0.05459815770819495 0.11363477474476416 1.850813834743384e-07 6.732637262829881 0.49106745924182543 QS(ph)SGSATNVASTPDNR ddPTM_A549_MK2206_60min_R1 2 QSSGSATNVASTPDNR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QS(0.696)S(0.29)GS(0.014)ATNVASTPDNR;QS(0.852)S(0.114)GS(0.03)AT(0.004)NVASTPDNR 161.35 1.7561e-20 10080900.0 1442.22 1275.42 1290.38 1909.13 1835.27 1259.57 1105.31 1220.55 2190.33 2367.7 1830.96 True False 1685.6314771063453 1340.3334302407222 1473.3752872986418 2376.866935704102 1565.304214167468 1392.8568613651012 1306.1305196356172 1393.5667002776077 1694.2237522382736 1832.8349255609342 1376.2821000747333 1.224771779720752 0.9738798682101155 1.0705474460640272 1.7270201622000578 1.1373425652215274 1.0120431423829954 0.9490281967372047 1.012558907946224 1.231014885789967 1.3317291022395843 1.0 10.42656049791844 -6.988095036617416 24.99960409224059 1.0838025965035283 1.2435904025927453 0.11832258778758031 0.2034469367934957 387.2405627028988 813173.198751983 0.028907256298685922 0.05460374929147801 1.0277913620365142e-07 6.988095036617416 0.15978780608921705 QS(ph)SGSATNVASTPDNR ddPTM_A549_PD325901_60min_R1 2 QSSGSATNVASTPDNR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QS(0.531)S(0.445)GS(0.023)ATNVASTPDNR;QS(0.943)S(0.056)GS(0.001)ATNVASTPDNR 126.84 4.728e-09 8188600.0 1989.7199999999998 1767.3899999999999 2011.1100000000001 1921.19 2449.67 2027.31 1833.1 2271.64 2471.56 2211.95 2563.59 True False 2191.7149096455523 1916.3341579557432 2147.5960183868647 2039.857542960937 2277.6136301027195 2010.8002595124872 1902.8596236108094 2226.3303581328955 2367.688928281422 2072.2870995062513 2248.2846819359465 0.9748386969208529 0.8523538737566062 0.9552153406736814 0.9072950411264032 1.0130450331323337 0.8943708399867908 0.8463606227892371 0.9902350783335202 1.053109042331178 0.9217191738022483 1.0 11.134609008483269 -8.50787371230715 20.000669812985553 1.0248999994419197 0.9210468555531717 0.20843481467951397 0.05703606229829309 29.880807170060073 39829.043555656484 0.00784852841273161 0.009305696063333643 3.105462488565461e-09 8.50787371230715 -0.103853143888748 QS(ph)SPQLHNLASYTK ddPTM_A549_PD325901_60min_R1 1 QSSPQLHNLASYTK 14 0 Q6XZF7 Q6XZF7 DNMBP Dynamin-binding protein 1 QS(0.5)S(0.5)PQLHNLASYTK 58.997 0.0024868000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QS(ph)SSSRDDNMFQIGK ddPTM_A549_MK2206_60min_R1 1 QSSSSRDDNMFQIGK 15 1 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 QS(0.306)S(0.258)S(0.218)S(0.218)RDDNMFQIGK 49.224 0.0071321 3741400.0 1267.4 1690.4 1805.3 1708.3 2503.0 1920.7 2154.1 1928.6 3721.7 3170.6 3147.4 True False 1481.3061350449884 1776.4341397178316 2061.318686092654 2126.833576688501 2134.8120157040503 2123.9471991425253 2545.472086877965 2201.9849560897915 2878.740892333659 2454.359257922667 2365.8137161790623 0.6261296588631631 0.7508765916645729 0.8712937421893948 0.8989860706883849 0.9023584575170633 0.8977660348393082 1.0759393562858628 0.9307516230171052 1.2168079306696244 1.0374270979739737 1.0 11.208120765218451 -5.947322235332261 0.4419169781228144 1.0957074985338573 0.5064470891505147 0.7245049814708824 0.07922127176625393 1.25392547717679 0.237804662608546 0.023497591914847057 0.34589030503856955 1.1289579460849452e-06 5.947322235332261 -0.5892604093833426 QS(ph)SSSRDDNMFQIGK ddPTM_A549_PD325901_60min_R1 1 QSSSSRDDNMFQIGK 15 1 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 QS(0.28)S(0.24)S(0.24)S(0.24)RDDNMFQIGK 40.515 0.023552 12486000.0 4428.6 4566.9 4367.2 4154.3 4341.8 3973.3 4409.9 5340.8 5848.5 4756.2 5777.2 True False 4878.188211836989 4951.768690536943 4663.5844541069955 4410.901675900158 4036.846946396855 3940.942762143417 4577.7211576898735 5234.273554223455 5602.707883706601 4455.89272030183 5066.641024688169 0.9628051776447338 0.9773277140433891 0.920448958468302 0.8705771051091252 0.7967501401276611 0.7778215869133863 0.9035021694617913 1.033085535114579 1.1058032050043303 0.8794569614444063 1.0 12.306813901119096 -8.257391535843 4.419596690685795 1.0507061709241636 0.8824684215601221 0.2778523431382023 0.08002248052750119 0.1194233005642179 6.091566422743068 0.01197923500532162 0.015102241179466009 5.528514642244956e-09 8.257391535843 -0.16823774936404157 QS(ph)STPSAPELGQQPDVNISEWK ddPTM_A549_MK2206_60min_R1 1 QSSTPSAPELGQQPDVNISEWK 22 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 QS(0.494)S(0.352)T(0.12)PS(0.034)APELGQQPDVNISEWK 103.85 2.0447999999999998e-10 5387100.0 1024.3 1005.9 881.32 1091.1 1610.4 1102.8 917.39 1203.3 1905.4 1444.7 1493.4 True False 1197.176798269356 1057.0960134537183 1006.3044283095206 1358.4195489813396 1373.5122932839804 1219.4975640206053 1084.067888111497 1373.8714599516975 1473.8299422985606 1118.3412666122736 1122.5475642567872 1.0664820239149324 0.9416937394128125 0.8964470284836185 1.210122040468475 1.2235671226932385 1.086366050625219 0.9657211174202969 1.2238870794408663 1.312933179160519 0.9962529002971037 1.0 10.132560860375575 -6.262683112511402 24.99848274707483 1.1475237296413527 0.9655562091722818 0.2709765140431283 0.1127599581614909 113.5205622007293 2281746.2151453374 0.01871493763022248 0.045880173031902886 5.461562243117984e-07 6.262683112511402 -0.18196752046907094 QS(ph)TLPTQK ddPTM_A549_PD325901_60min_R1 1 QSTLPTQK 8 0 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8YFM1;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 QS(0.61)T(0.371)LPT(0.018)QK 44.318000000000005 0.060662 13324000.0 5677.3 7128.2 4732.8 6195.0 6503.1 6129.3 5504.8 6165.5 6369.9 6969.1 7744.8 True False 6253.655316592634 7728.9184304200735 5053.996268638394 6577.651080134191 6046.344690477083 6079.385012962937 5714.288176342144 6042.524265758819 6102.195254923946 6529.0698366459565 6792.238698332232 0.9207060579493707 1.1379044191008532 0.7440840189964693 0.9684069380172503 0.890184364686963 0.8950487877370492 0.8412967255914064 0.8896218955382857 0.8984070681176561 0.9612544739113933 1.0 12.729671444797011 -10.668844301247589 0.9689118751191862 0.9991929612532608 0.9095931799838514 0.07921175336826325 0.09052789606606103 0.9162826926992377 1.5511508277309918 0.05532071111041834 0.015212430851831238 2.143658985757083e-11 10.668844301247589 -0.08959978126940948 QS(ph)VDKVTSPTK ddPTM_A549_MK2206_60min_R1 1 QSVDKVTSPTK 11 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QS(0.889)VDKVT(0.08)S(0.029)PT(0.001)K 45.79 0.01153 3663300.0 1823.5 1925.5 2051.4 1764.4 2274.3 2001.9 1737.3 1468.6 2852.4 2697.0 2591.9 True False 2131.2622197053315 2023.4997255245391 2342.319366670621 2196.678079206927 1939.7534827469917 2213.739729246329 2052.944922024553 1676.778547398874 2206.335954346813 2087.745826852152 1948.2596971991197 1.0939312776265413 1.0386190960237933 1.2022623934776324 1.12750783807977 0.9956339421975638 1.1362652178397323 1.0537326851117086 0.8606545368717858 1.132465018661892 1.0715952446450348 1.0 10.927970281840764 -6.734858731067346 24.685626536311364 1.049497720371051 1.116274555457657 0.17548038323493742 0.07976168126449386 333.39143943860137 309620.6607468752 0.012083643744417463 0.025148177884246142 1.8413708720633466e-07 6.734858731067346 0.06677683508660603 QS(ph)VENDIHGLR ddPTM_A549_MK2206_60min_R1 3 QSVENDIHGLR 11 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 QS(1)VENDIHGLR;QS(1)VENDIHGLR;QS(1)VENDIHGLR 91.20700000000001 9.1251e-05 8044100.0 662.621 941.53 501.94 511.64 955.3299999999999 813.8199999999999 899.69 653.95 979.23 1021.6800000000001 1072.3899999999999 True False 774.4552252719312 989.4498554002181 573.1226396152147 636.9918229683927 814.8022225179985 899.9378922300043 1063.1520272240084 746.6494151378821 757.435968508985 790.8817784124234 806.0859665416741 0.9607600893916473 1.227474359397701 0.710994439059726 0.7902281511006316 1.0108130600681706 1.1164291770156727 1.3189065079314268 0.9262652448115543 0.9396466381353706 0.9811382547763723 1.0 9.654789895636853 QS(ph)VENDIHGLR ddPTM_A549_PD325901_60min_R1 1 QSVENDIHGLR 11 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 QS(1)VENDIHGLR 76.262 0.00038308 1952800.0 146.05 136.54 0.0 149.25 126.22 0.0 94.874 164.72 221.12 0.0 97.137 True False 160.87688848367267 148.04670498717164 0.0 158.46883352865663 117.35474263536112 0.0 98.48448198704482 161.43453037965983 211.82709536551317 0.0 85.18976480217663 1.8884532532429554 1.7378461524216933 0.0 1.8601863016835998 1.377568571856917 0.0 1.1560600292269911 1.89499913228467 2.486532224351216 0.0 1.0 6.41260820190937 -8.245394312376657 17.960069358827553 1.7360642191407665 1.1167648155643 0.0 0.8656045064875741 34.99173706499783 39166.01997309987 0.12738146818441218 0.1637313976845721 5.683366821613289e-09 8.245394312376657 -0.6192994035764665 QSAEEQAQAR ddPTM_A549_PD325901_60min_R1 2 QSAEEQAQAR 10 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 70.977 0.007897399999999999 2710500.0 555.19 692.8299999999999 684.96 513.27 815.13 663.02 666.24 609.4499999999999 728.19 925.03 648.73 False True 611.5524800907239 751.2172155870962 731.4455045990859 544.9735221792532 757.8780808458397 657.6205849435804 691.5941277805173 597.2940416457238 697.5867066489373 866.6234479333929 568.9403226382947 1.0748974114803953 1.32037963507938 1.2856278163010504 0.9578746671568251 1.3320871288071152 1.155869181312474 1.2155829008101438 1.0498360159743065 1.226115778565461 1.5232238135533787 1.0 9.15213352288824 -10.960664388234163 0.7461779847413605 0.9724176575923272 1.1865393074286044 0.0 0.192118090925381 0.9940436214037842 0.7622061653090698 0.13980414143387507 0.01958805103525869 1.0948020747480651e-11 10.960664388234163 0.21412164983627713 QSAGPNS(ph)PTGGGGGGGSGGTR ddPTM_A549_MK2206_60min_R1 2 QSAGPNSPTGGGGGGGSGGTR 21 0 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 QSAGPNS(0.693)PT(0.306)GGGGGGGSGGTR;QSAGPNS(0.984)PT(0.012)GGGGGGGS(0.002)GGT(0.002)R 91.725 2.326e-06 20743700.0 782.63 538.6700000000001 692.1800000000001 720.1 839.28 570.67 609.69 568.5 1186.25 1027.98 957.31 True False 914.7188105335803 566.0860021544038 790.3415322326555 896.5245323265169 715.8230237874935 631.0579206199121 720.4627810448112 649.0866159582322 917.5662690519935 795.7586040368839 719.5835065880972 1.271178122009378 0.786685627132421 1.0983319170002344 1.2458936650415808 0.9947740842220885 0.8769766327914756 1.0012219213595974 0.9020309804429429 1.2751352145390753 1.1058599825473636 1.0 9.491018309054146 -8.752107661588097 24.999987065553817 1.1299249678587702 1.0178387762959107 0.0873961801889519 0.15036566787718839 372.4183085107508 997720.3996038495 0.027507949583803055 0.03098490692326691 1.7696702027495738e-09 8.752107661588097 -0.11208619156285948 QSAGPNS(ph)PTGGGGGGGSGGTR ddPTM_A549_PD325901_60min_R1 2 QSAGPNSPTGGGGGGGSGGTR 21 0 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 QSAGPNS(0.87)PT(0.126)GGGGGGGS(0.002)GGT(0.002)R;QSAGPNS(0.851)PT(0.148)GGGGGGGSGGT(0.001)R 92.56299999999999 2.0968e-06 20450000.0 710.28 989.91 779.96 727.8900000000001 949.05 861.16 707.42 848.96 928.95 1085.31 1073.6599999999999 True False 782.3871027194996 1073.3331897894466 832.8927758804936 772.8501121418689 882.3920020447588 854.1469984766877 734.3412552150776 832.0268268037637 889.9094620106434 1016.7833413798364 941.6066264915014 0.8309065385772975 1.139895535557952 0.8845443016728929 0.8207781151897451 0.9371132033475796 0.9071165967250093 0.7798811462821683 0.883624651096562 0.9450968557076902 1.0798387700057392 1.0 9.878980663053364 -9.329959819859987 1.4984957837420072 0.9842863893105621 0.902147101993761 0.20959485779302423 0.09311705541420769 0.5155560846758664 2.390664286024787 0.019965521375930394 0.017108080355673627 4.677784172984162e-10 9.329959819859987 -0.08213928731680109 QSAS(ph)T(ph)LQGEPR ddPTM_A549_MK2206_60min_R1 1 QSASTLQGEPR 11 0 A0A2R8YE50;A0A2R8YH74;B1ALS0;A0A2R8Y507;Q13976-2 A0A2R8YE50 PRKG1 2 QS(0.016)AS(0.992)T(0.992)LQGEPR 42.556000000000004 0.041388999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QSDEVGDRDHR ddPTM_A549_MK2206_60min_R1 1 QSDEVGDRDHR 11 1 P40222 P40222 TXLNA Alpha-taxilin 0 69.786 0.012062 9236100.0 300.61 393.23 286.86 243.85 276.56 273.63 136.45 226.91 313.68 407.79 356.97 False True 351.3456187911266 413.24372737887035 327.5410614814927 303.5932609468427 235.87839035681674 302.58534497910637 161.24119876259158 259.0751873827307 242.631980844029 315.6699557775449 268.3244971291985 1.3094056731687578 1.5400894506471137 1.220690115833074 1.1314407152346668 0.8790788499763443 1.1276843829634058 0.6009186655997115 0.9655293875683134 0.9042483390072337 1.176448513478624 1.0 8.067834963618271 -6.27741940424028 1.6478257873564883 0.9356608471591801 1.424221017306643 0.5780081766382279 0.15404354696141848 0.1627710860669702 0.831261327671899 0.018630109587137768 0.06738099576773264 5.279351711585059e-07 6.27741940424028 0.4885601701474629 QSDEVGDRDHR ddPTM_A549_PD325901_60min_R1 2 QSDEVGDRDHR 11 1 P40222 P40222 TXLNA Alpha-taxilin 0 ; 97.734 0.0009918 13259900.0 616.73 706.99 642.01 496.06 698.41 502.30000000000007 611.21 675.31 656.79 701.4000000000001 782.47 False True 679.3399755873706 766.5705284816207 685.5806593197541 526.7004995659992 649.3560909836996 498.2094353370342 634.4699310169457 661.8404122795534 629.1874003487496 657.1134842983271 686.2311504860058 0.9899579392544995 1.1170733475720485 0.9990520815532914 0.767526363664746 0.9462643753840226 0.7260081897829762 0.9245717431620503 0.9644569644074329 0.9168738549731291 0.9575687198591074 1.0 9.42255080624397 -6.004356592323674 24.586761738125 0.9278981383368182 1.0546524491035272 0.301963072602091 0.08657413724017163 160.85084905041128 907802.3287054339 0.012497797386552328 0.037523245820439734 9.900187223766614e-07 6.004356592323674 0.12675431076670896 QSDSQPNSDNLS(ph)R ddPTM_A549_MK2206_60min_R1 2 QSDSQPNSDNLSR 13 0 Q5RGS4;Q9HB21-2;R4GMZ9;Q9HB21 Q5RGS4;Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 QSDS(0.001)QPNS(0.022)DNLS(0.977)R;QSDSQPNS(0.019)DNLS(0.981)R 59.898 0.0084007 3136400.0 726.8199999999999 596.7 559.85 470.03 542.97 839.77 329.87 731.45 1331.08 1094.12 601.45 True False 849.4894469570758 627.0694812882334 639.2451484013579 585.1873711004482 463.09983226800995 928.6339040057887 389.8031090935588 835.1352774716773 1029.5925052979785 846.9575321006588 452.09336582445746 1.8790132994053323 1.3870353530728807 1.413967106629849 1.2943949532045766 1.024345560619941 2.0540754945879174 0.8622181579300475 1.8472628456926983 2.2773891039528262 1.873412874697043 1.0 8.820476936977338 QSDSQPNSDNLS(ph)R ddPTM_A549_PD325901_60min_R1 2 QSDSQPNSDNLSR 13 0 Q5RGS4;Q9HB21-2;R4GMZ9;Q9HB21 Q5RGS4;Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 QSDS(0.001)QPNS(0.096)DNLS(0.902)R;QSDS(0.001)QPNS(0.035)DNLS(0.965)R 64.39399999999999 0.0029471999999999996 2289000.0 497.2 379.37 463.77 518.3 578.28 440.76 229.03 534.46 595.58 673.58 587.4 True False 547.6753779807054 411.34084129913094 495.2442210755634 550.3142138552948 537.6636077576983 437.17059669351204 237.74586198002487 523.7997760242412 570.5498437852403 631.0500438461185 515.1535238353931 1.063130411888057 0.7984820490727471 0.9613526806308107 1.0682528380241394 1.0436958748815583 0.8486219669793059 0.46150487375097865 1.0167838358640653 1.1075336135476925 1.2249747204442256 1.0 9.008858631913764 -8.500229783900123 24.828394625478776 1.0513786921883899 0.8904934525561378 0.22509242578796418 0.1705800739486568 965.4772759583059 1058383.4142248044 0.027557471352609348 0.03318906428581128 3.160604951150543e-09 8.500229783900123 -0.1608852396322521 QSELSAEES(ph)PEKLGTSQLHR ddPTM_A549_PD325901_60min_R1 2 QSELSAEESPEKLGTSQLHR 20 1 F8W9X7;Q567U6 F8W9X7 CCDC93 Coiled-coil domain-containing protein 93 1 QSELSAEES(1)PEKLGTSQLHR;QSELSAEES(1)PEKLGTSQLHR 179.5 1.3793999999999998e-35 24055000.0 2310.2 2841.0 2720.8 2880.3 3311.5 2984.0 2552.5 3431.1 2962.0 3235.8 3493.2 True False 2544.7298033206453 3080.4210404903665 2905.449849499522 3058.2095893640853 3078.9116640548114 2959.6992933420456 2649.6367842815935 3362.664018854119 2837.517440632462 3031.4910357749186 3063.5585452192618 0.8306450703518435 1.0055042183859744 0.9483905094725638 0.9982540056681719 1.0050115310704633 0.966098492865661 0.864888574894839 1.0976333467175343 0.9262161629195756 0.9895325945396457 1.0 11.580992706432834 -2.000017332052871 0.0046785662038933305 1.8638904557281064 6.263587881197885e-07 0.06550999282413994 0.06747583041336894 151525.29517968773 53.3499739399868 9894.846419672514 11410.298325915242 0.009999600922697626 2.000017332052871 -1.8638898293693182 QSERDSS(ph)PSGR ddPTM_A549_PD325901_60min_R1 1 QSERDSSPSGR 11 1 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 QSERDS(0.155)S(0.841)PS(0.004)GR 59.607 0.0025528 5984400.0 516.77 530.48 458.74 483.43 506.09 396.99 435.84 610.58 488.92 812.37 830.25 True False 569.2321099740328 575.1854113197219 489.8728550277165 513.2903731508109 470.54398431571775 393.75704506161486 452.4261297007993 598.4015029092566 468.37239266509926 761.0768195600682 728.1345133883808 0.7817677908510419 0.7899438918821348 0.6727779634398713 0.7049389415181122 0.6462322217443545 0.540775142259447 0.6213496563916879 0.8218282362754508 0.6432498172425916 1.045242061138388 1.0 9.508061183978983 -10.78884903691283 0.786742471991094 1.0238353677933199 0.6859363253604965 0.712953494986436 0.08042758352376767 0.3764194502907525 0.36428345856263294 0.08196988237746086 0.01560544143349166 1.6261139034198402e-11 10.78884903691283 -0.3378990424328233 QSETVDQNS(ph)DSDEMLAILK ddPTM_A549_PD325901_60min_R1 2 QSETVDQNSDSDEMLAILK 19 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 QSETVDQNS(0.981)DS(0.018)DEMLAILK;QSETVDQNS(0.84)DS(0.16)DEMLAILK 120.52 8.9499e-15 4805400.0 2900.2 3227.3 2987.3 2774.0 3271.5 2767.3999999999996 3074.5 3443.5 3203.6 3023.5 3944.3 True False 3194.626168985601 3499.275897210337 3190.0361420942077 2945.3436797889017 3041.721126062303 2744.863211928546 3191.5017799309535 3374.81669112651 3068.9638328190945 2832.5956940062633 3459.176104977765 0.9235222700539947 1.0115922956841856 0.9221953567220055 0.8514581479533647 0.8793195355637595 0.7935020156905801 0.9226190523628943 0.975612859452324 0.887195025544622 0.8188642636407407 1.0 11.756212747147373 -10.883943584824047 0.7862787913888976 1.0097939575451507 0.9055186406612918 0.0 0.07715143504226106 0.9565064994916188 0.8774284958644604 0.06610094677995407 0.010948082510216275 1.3063405717216869e-11 10.883943584824047 -0.10427531688385883 QSFDDNDS(ph)EELEDK ddPTM_A549_MK2206_60min_R1 2 QSFDDNDSEELEDK 14 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 QSFDDNDS(1)EELEDK;QSFDDNDS(1)EELEDK 157.03 5.4354e-19 6749100.0 1813.97 2021.7799999999997 1739.02 1839.81 2426.6 1721.3400000000001 1762.83 1695.54 2178.91 2185.81 2177.71 True False 2120.1237886914596 2124.67996627941 1985.6391854477633 2290.563532592208 2069.6503544975817 1903.491056266983 2083.11339255888 1935.8879873734757 1685.390364004281 1692.0340028890257 1636.9245052615831 1.2951872745974076 1.2979706513342733 1.213030398815158 1.3993092077427067 1.2643529667037687 1.1628459651917802 1.272577559846595 1.1826373062110873 1.0296078765923007 1.0336664870312 1.0 10.676772071106846 -8.589711256332278 1.4080060507017182 1.0076867037901365 1.2781332961259797 0.7910760982183752 0.05617176819186083 0.11022794482390735 0.4250371180686834 0.01060166694394263 0.012120349083420264 2.5721052962787145e-09 8.589711256332278 0.27044659233584323 QSFDDNDS(ph)EELEDK ddPTM_A549_PD325901_60min_R1 2 QSFDDNDSEELEDK 14 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 QSFDDNDS(1)EELEDK;QSFDDNDS(1)EELEDK 142.1 6.0628e-13 6574300.0 1375.84 1686.6399999999999 1524.81 1595.28 1811.3200000000002 1487.6 1172.57 1707.02 1838.02 1550.24 1456.67 True False 1515.514263960124 1828.7790720635946 1628.2927760274065 1693.81682245625 1684.099131914771 1475.4854788122075 1217.1927930049237 1672.9721469687163 1760.7744112867242 1452.3575818343868 1277.508824591933 1.1863043407502218 1.431519717797449 1.274584366607035 1.3258748509994018 1.3182681007723862 1.1549708701883237 0.9527862113936664 1.3095581922912383 1.3782874743344007 1.1368669662992776 1.0 10.319117541500951 -10.953561680340615 1.1891806892061427 0.9984974369374324 1.2688494243761868 0.22383894201663268 0.12836400985420432 0.4260561133919093 1.0613448781200052 0.09487087397518414 0.02158442667307265 1.1128543292952632e-11 10.953561680340615 0.2703519874387543 QSFDDNDS(ph)EELEDKDSK ddPTM_A549_MK2206_60min_R1 4 QSFDDNDSEELEDKDSK 17 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK 270.34 1.0607999999999998e-100 3068842900.0 52142.1 60976.5 54847.8 52551.6 75821.9 58359.6 56017.1 59453.200000000004 85244.6 85506.3 86103.2 True False 60942.41172804897 64079.94339831061 62626.04278018758 65426.74435913096 64668.59895066362 64535.174136032765 66194.681972913 67880.8731677888 65936.83420765403 66190.36744329565 64721.399112572 0.941611469524166 0.9900889702160843 0.9676249839911542 1.0108981767426277 0.9991841931319108 0.9971226676324576 1.0227634581535925 1.0488165289770919 1.0187794935175611 1.0226967950456174 1.0 15.981955175063813 -4.991806995035959 0.6252382837507583 1.0126443447710158 0.8842682896928767 0.6511941080251923 0.0163375295745858 2.298887965933488 0.4851047397836097 0.002942379021953474 0.22778183154352186 1.019044161213609e-05 4.991806995035959 -0.1283760550781391 QSFDDNDS(ph)EELEDKDSK ddPTM_A549_PD325901_60min_R1 4 QSFDDNDSEELEDKDSK 17 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QS(0.158)FDDNDS(0.842)EELEDKDS(0.001)K 273.36 3.7119999999999986e-101 4092012000.0 85633.68 92445.77 98336.71 77820.4 106346.6 80690.79999999999 102162.0 100376.32 92384.09999999999 97746.71 93133.09999999999 True False 94327.14815341684 100236.49947635803 105010.43048727499 82627.18936504844 98877.18169185314 80033.68087774947 106049.83081519131 98374.23555390052 88501.51755136183 91574.966049042 81678.31911936341 1.1548615247036196 1.2272106056672638 1.2856585642245453 1.0116171617623322 1.2105682726814637 0.9798644455548786 1.2983840994598794 1.2044106271351882 1.0835374491733492 1.1211661434317202 1.0 16.317665556451857 -9.185175827728553 1.5975006663159286 1.0259938876043926 1.1699241737200092 0.14413180015327243 0.09995119885356178 0.2981664640524306 1.5711249367013829 0.01983434340516801 0.01814392687715835 6.528661808380449e-10 9.185175827728553 0.14393028611561665 QSFTMVADT(ph)PENLR ddPTM_A549_MK2206_60min_R1 8 QSFTMVADTPENLR 14 0 C9J9W2;Q14847;Q14847-2;F6S2S5 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 QSFT(0.001)MVADT(0.999)PENLR;QSFT(0.002)MVADT(0.998)PENLR;QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR 241.51 1.5912e-57 131085900.0 43912.4 47628.399999999994 44276.5 40484.4 58572.7 47302.0 40318.8 42802.7 68309.0 69309.2 70414.6 True False 51323.7395648963 50052.4821226554 50555.57348074079 50403.07981741376 49956.73342078651 52307.46624347361 47644.20406499948 48870.113802771186 52837.12056705802 53652.20358267 52928.71147590456 0.9696767242909566 0.945658428609989 0.9551635033427156 0.9522823891218176 0.9438494160873155 0.9882626042632123 0.9001580188984798 0.9233195451020753 0.9982695420634179 1.0136691804238387 1.0 15.69176291223091 -8.779963270938165 24.597423790697437 0.9991828511540912 0.9473495444895976 0.567555750855562 0.021926987262530194 105.77939704242219 140461.33308262518 0.0036681310982714333 0.0039086538835601745 1.659727267608589e-09 8.779963270938165 -0.051833306664493595 QSFTMVADT(ph)PENLR ddPTM_A549_PD325901_60min_R1 4 QSFTMVADTPENLR 14 0 C9J9W2;Q14847;Q14847-2;F6S2S5 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 QSFT(0.01)MVADT(0.99)PENLR;QSFT(0.026)MVADT(0.974)PENLR;QSFTMVADT(1)PENLR;QSFT(0.001)MVADT(0.999)PENLR 235.78 2.9760999999999997e-57 130220000.0 26584.5 25786.1 27543.9 26531.0 31332.199999999997 28688.1 26705.1 28620.6 30098.7 30510.000000000004 30725.299999999996 True False 29283.338869525483 27959.185143325805 29413.19468892599 28169.759613727227 29131.534362222013 28454.473625109225 27721.37719409144 28049.73968057365 28833.756310048728 28583.593393130846 26946.282883724212 1.0867301807780276 1.0375896840381422 1.0915492432053333 1.0454042858260797 1.081096583448165 1.0559702704782326 1.0287644241586802 1.040950241694224 1.0700457808770563 1.0607620173985326 1.0 14.717798653080921 -14.999999951597708 0.2674478671740325 0.5713054263898523 1.0652594191284706 0.0 0.02703343806627193 22.971694124314965 0.30017201402511656 5.250021060570081 0.008524887693637177 1.000000111450402e-15 14.999999951597708 0.4939539927386183 QSFTQS(ph)LKR ddPTM_A549_MK2206_60min_R1 1 QSFTQSLKR 9 1 H0Y9Z7;A0A1B0GUA8;Q9H1H9;H0Y307;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 H0Y9Z7;Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 QSFT(0.095)QS(0.904)LKR 49.333 0.012735 11552000.0 4698.7 4523.6 5047.5 4310.3 5882.9 4539.0 4813.4 4960.4 6965.9 6347.3 7072.0 True False 5491.725687814332 4753.831918142203 5763.31139868868 5366.323693496719 5017.533203030508 5019.31396725565 5687.932474341213 5663.551890587885 5388.134772256506 4913.440521608698 5315.827222729342 1.0330895752843292 0.8942788617763634 1.0841795937320897 1.0094992686277433 0.9438856819079084 0.9442206747792959 1.0699995007401346 1.0654130868610152 1.0136023137129049 0.9243040294086075 1.0 12.376078498952177 -7.7457770005064335 24.993261899580588 1.0162839285842806 0.984513851115789 0.05907815943626926 0.059057274453233354 510.30135657739515 814312.0298311479 0.00788165147474392 0.011667299869774389 1.7956554148747178e-08 7.7457770005064335 -0.03177007746849159 QSFTQS(ph)LKR ddPTM_A549_PD325901_60min_R1 2 QSFTQSLKR 9 1 H0Y9Z7;A0A1B0GUA8;Q9H1H9;H0Y307;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 H0Y9Z7;Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 QSFT(0.002)QS(0.998)LKR;QSFT(0.008)QS(0.992)LKR 66.393 0.0022538 32211000.0 11693.6 13157.5 14276.7 11865.7 15163.400000000001 13697.8 13430.099999999999 14302.8 14926.5 15733.400000000001 14152.099999999999 True False 12880.725663626661 14266.328701250262 15245.602714771323 12598.617340040075 14098.375094890154 13586.249658291117 13941.189804732716 14017.519433670459 14299.191113301986 14739.990438921159 12411.481417553392 1.0378072713712985 1.1494460831302205 1.2283467381427708 1.0150776459466007 1.135913967123297 1.094651734246346 1.1232494603759289 1.129399381273348 1.1520938260503562 1.1876092742704016 1.0 13.599387703414498 -10.832104536627856 1.0141489178702945 0.9981078351151587 1.1217388991815822 0.0 0.07728770117768877 0.42894741477856385 0.7634965983522425 0.038916290919510724 0.009008090910329678 1.4719581528644657e-11 10.832104536627856 0.12363106406642355 QSGEAFVELGS(ph)EDDVK ddPTM_A549_MK2206_60min_R1 1 QSGEAFVELGSEDDVK 16 0 P52597;A0A1B0GW42 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed 1 QSGEAFVELGS(1)EDDVK 63.037 0.0033415 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QSGLSSLVNGKS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 QSGLSSLVNGKSPIR 15 1 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 QSGLSSLVNGKS(1)PIR;QSGLSSLVNGKS(1)PIR 157.51 4.6360999999999996e-20 72885000.0 5701.9 5791.9 5644.8 6138.9 7790.2 5599.2 5862.9 5581.4 8406.7 7892.1 7645.0 True False 6664.241321929162 6086.682970794905 6445.317520221464 7642.9307755856935 6644.271899615538 6191.703627551846 6928.113039393171 6372.580542320622 6502.595872741319 6109.269128698506 5746.535508733852 1.159697231801759 1.0591917445814232 1.1216005731497822 1.3300067082104707 1.1562221950107616 1.077467217968358 1.2056156320383824 1.108943037528486 1.1315680313570449 1.063122140185744 1.0 12.488476725808912 -10.43880410441388 0.49111670105038924 0.9778797136279999 1.157873115652166 0.2911546533744902 0.07040772937303261 1.0688587791092852 0.3987538301314531 0.08970391308804697 0.01801536731209778 3.640792229469783e-11 10.43880410441388 0.17999340202416614 QSGLSSLVNGKS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 QSGLSSLVNGKSPIR 15 1 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 QSGLSSLVNGKS(1)PIR;QSGLSSLVNGKS(1)PIR 74.325 0.00020471 120123000.0 5680.3 5554.299999999999 5499.4 5980.200000000001 7453.799999999999 5791.9 6631.5 6639.6 6859.700000000001 6603.1 6575.299999999999 True False 6256.959874384152 6022.380353817546 5872.622354578678 6349.583371980383 6930.270802214029 5744.732686698327 6883.865361396038 6507.167969334568 6571.41066424933 6186.179139107901 5766.57978426091 1.0850382910614826 1.0443591485987602 1.0183891620830767 1.1011004112542935 1.2017991706503834 0.9962114288920078 1.1937518631381128 1.128427631764498 1.139568151330377 1.072763990189164 1.0 12.493500180431303 -4.8978910783304235 14.624932691956447 1.0808094554027423 1.2165802811936348 0.0 0.06908686114576802 9642285.855076551 17267808.06351313 0.010371605603546172 42179910.21052822 1.26505358491389e-05 4.8978910783304235 0.1357708257908925 QSGT(ph)PPGMGAPGVPGAAGVGGAGGR ddPTM_A549_MK2206_60min_R1 1 QSGTPPGMGAPGVPGAAGVGGAGGR 25 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 QS(0.071)GT(0.929)PPGMGAPGVPGAAGVGGAGGR 56.528999999999996 0.003439 2611000.0 638.96 636.37 771.52 515.05 866.92 816.95 840.24 576.38 841.12 1021.8 876.2 True False 746.800826927841 668.7585148439631 880.9331372592944 641.2372731214729 739.3972164019796 903.399106752479 992.9007317572731 658.0836300897199 650.6076629926341 790.9746703290792 658.6153581102159 1.1338952511989064 1.015400729133999 1.3375532872281954 0.9736142123399514 1.1226540761569141 1.3716641976655817 1.5075578173673811 0.9991926577266257 0.9878416210327094 1.2009660275743428 1.0 9.363292343996333 -8.458377042185074 24.999900403902206 0.9942182462080195 1.2040949393731957 0.16475205785117042 0.15985405899898347 189.8733853631436 73592.04239195802 0.024512312381161753 0.02963392947553896 3.4803502966868434e-09 8.458377042185074 0.2098766931651762 QSGTPPGMGAPGVPGAAGVGGAGGREPS(ph)TASGGGQLNR ddPTM_A549_PD325901_60min_R1 1 QSGTPPGMGAPGVPGAAGVGGAGGREPSTASGGGQLNR 38 1 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 QSGTPPGMGAPGVPGAAGVGGAGGREPS(0.333)T(0.333)AS(0.333)GGGQLNR 40.621 0.014863 5739600.0 391.53 530.08 639.68 209.11 604.49 360.42 479.48 710.14 432.04 544.0 726.86 True False 431.2778373708479 574.7517019159216 683.0925315083258 222.026249776733 562.0327077772897 357.4848590168702 497.7268737815235 695.975700605947 413.88286125957103 509.6517471603791 637.4608279451716 0.6765558265925987 0.9016266988021989 1.0715835413922548 0.3482978718746145 0.8816741094334828 0.5607950219768134 0.7807960143777389 1.0917936759336189 0.6492679128123138 0.7995028475760939 1.0 9.316192880662953 -11.023304917964907 1.2470443656431165 1.002925430953116 0.7657058386322457 0.01816655589782945 0.21447338980152722 0.7316632395571152 1.9843777865376087 0.1507761644616545 0.03224293943032189 9.47752812818366e-12 11.023304917964907 -0.2372195923208702 QSHSES(ph)PSLQSK ddPTM_A549_MK2206_60min_R1 8 QSHSESPSLQSK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QSHSES(1)PSLQSK;QSHS(0.071)ES(0.73)PS(0.2)LQSK;QSHS(0.003)ES(0.997)PSLQSK;QSHS(0.001)ES(0.975)PS(0.024)LQSK;QSHS(0.002)ES(0.99)PS(0.009)LQSK;QSHSES(1)PSLQSK;QSHSES(1)PSLQSK;QSHSES(0.979)PS(0.021)LQSK 254.72 6.3461e-63 939807100.0 20671.03 23696.12 22812.73 17357.890000000003 27297.999999999996 19898.999999999996 20396.279999999995 23062.29 35992.49999999999 34121.200000000004 38244.6 True False 24159.79450583794 24902.151293688155 26047.918146450156 21610.573829225294 23282.500361441947 22004.69897211284 24102.020062275322 26331.440232801007 27840.256218211885 26413.19722179741 28747.410322736778 0.8404163795835753 0.8662398113124177 0.9060961614983611 0.7517398467065798 0.8098990517774554 0.765449782261221 0.838406652692909 0.91595868765873 0.9684439713233087 0.9188026651884813 1.0 14.811144377943092 -8.498161119633611 1.9810102343245415 0.9866234358835426 0.8234666118653773 0.6385270133402653 0.04542484938866149 0.11768380505470488 0.9075233757008279 0.007709841834525912 0.00913256527396867 3.1756956954411144e-09 8.498161119633611 -0.16315682401816534 QSHSES(ph)PSLQSK ddPTM_A549_PD325901_60min_R1 4 QSHSESPSLQSK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QSHSES(0.999)PS(0.001)LQSK;QSHS(0.001)ES(0.998)PS(0.001)LQSK;QSHSES(1)PSLQSK;QSHSES(0.999)PS(0.001)LQSK 316.54 5.667699999999998e-150 1316246000.0 29352.0 30330.4 30191.600000000002 28504.9 35838.7 30482.6 31908.6 30242.0 29731.0 34577.6 36084.6 True False 32331.793432199658 32886.449252548075 32240.583532839522 30265.582933675072 33321.513348803026 30234.359812073828 33122.89923405591 29638.79958560995 28481.50946233752 32394.36443494985 31646.422959126 1.021657122953797 1.0391837742617442 1.0187749678527942 0.9563666317917068 1.052931428990902 0.9553800077539263 1.0466553922014157 0.9365608120668468 0.8999914302834089 1.0236343133247596 1.0 14.94975481851514 -8.274502961758154 24.569661649548866 0.9502382033619672 1.0113648001315598 0.19360372544792992 0.04331919639088784 591.4915747793468 1112460.6307640413 0.00738276338031355 0.008951671129958714 5.314923748756468e-09 8.274502961758154 0.061126596769592645 QSHSGSIS(ph)PYPK ddPTM_A549_MK2206_60min_R1 6 QSHSGSISPYPK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QSHSGS(0.001)IS(0.999)PYPK;QSHSGSIS(0.999)PYPK;QSHS(0.005)GS(0.018)IS(0.977)PYPK;QSHSGS(0.021)IS(0.979)PYPK;QSHS(0.004)GS(0.116)IS(0.874)PY(0.006)PK;QS(0.032)HS(0.025)GS(0.123)IS(0.82)PYPK 179.65 1.3887e-16 163689200.0 13764.1 14470.000000000002 12601.300000000001 11816.8 16459.2 12622.6 11896.5 12867.1 20758.8 21321.7 21945.100000000002 True False 16087.143580063697 15206.46119363287 14388.353824328009 14711.916530476316 14038.073483370395 13958.315153796244 14057.940059209755 14691.050828841104 16056.964944991805 16505.113161436228 16495.52601605171 0.9752428364157276 0.9218536698275364 0.8722579571167829 0.8918731367620667 0.851023087697235 0.8461879384878955 0.8522274491598538 0.890608205797458 0.9734133321584808 1.0005811967060152 1.0 14.009787163432854 -8.797011125946623 3.590821113856471 0.9887086576057337 0.8840328713149851 0.6312736984097258 0.035384975829961876 0.11099799280156177 2.898820486710243 0.006695567206936515 0.007206459290812782 1.5958382638280896e-09 8.797011125946623 -0.10467578629074858 QSHSGSIS(ph)PYPK ddPTM_A549_PD325901_60min_R1 5 QSHSGSISPYPK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QSHSGS(0.005)IS(0.995)PYPK;QSHSGS(0.001)IS(0.999)PYPK;QSHSGS(0.004)IS(0.996)PYPK;QSHSGS(0.007)IS(0.992)PYPK;QS(0.022)HS(0.019)GS(0.041)IS(0.902)PY(0.016)PK 186.56 2.5315999999999996e-19 310215700.0 18981.1 21083.699999999997 18948.5 19244.6 29650.3 19848.300000000003 20749.7 20230.3 22639.1 24093.1 25395.600000000002 True False 20908.047298852704 22860.49739225159 20234.459156586905 20433.295234342284 27567.76521598201 19686.662025482892 21539.341188171515 19826.790796136658 21687.657356590957 22571.857554245835 22272.10219597227 0.9387550000840852 1.0264184849324967 0.9085114183898699 0.9174390030428955 1.2377711350914786 0.8839157548874333 0.9670996028415643 0.8902074272864181 0.9737588830080437 1.0134587815571254 1.0 14.442950115698052 -6.784837569075219 0.002265927295518654 1.9503497465253914 4.041150441652742e-05 0.006212453088953573 0.09423792493147186 508262.1937824824 296.70154234321075 126463.69072301718 128914.43563869107 1.641203486624566e-07 6.784837569075219 -1.9503093350209748 QSIS(ph)FSGLPSGR ddPTM_A549_PD325901_60min_R1 1 QSISFSGLPSGR 12 0 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 QS(0.045)IS(0.848)FS(0.107)GLPSGR 84.946 0.00043775 6862500.0 4084.5 4569.7 5112.9 4630.8 5733.6 5244.7 4637.1 5075.3 5323.6 4894.0 4757.3 True False 4499.155433150024 4954.8046563635435 5459.892140365371 4916.8339986901365 5330.891715846193 5201.9889020747405 4813.567378018483 4974.06916000417 5099.867605317685 4584.992004784732 4172.182259009388 1.078369820358296 1.187581066398565 1.3086418093493661 1.1784801558160005 1.2777226364775158 1.2468268592153646 1.153728931094535 1.1921984350667307 1.222350148847179 1.0989433634841634 1.0 12.026586467070496 -10.744653015539182 0.6731101274191466 0.9758616581966424 1.2115569442009737 0.4271970584622401 0.0655214219945078 0.4875540877902626 0.32745265892197223 0.06731778362010414 0.01175544610425135 1.80030871757603e-11 10.744653015539182 0.23569528600433132 QSKLS(ph)PQMQVHQDK ddPTM_A549_PD325901_60min_R1 2 QSKLSPQMQVHQDK 14 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;J3KSK9 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 QS(0.039)KLS(0.961)PQMQVHQDK;QS(0.263)KLS(0.737)PQMQVHQDK 73.809 0.00029561 29634000.0 5633.1 5841.0 6575.9 5949.7 6848.7 6489.8 6619.700000000001 6795.700000000001 6844.1 6602.2 7134.7 True False 6204.968165130954 6333.241568991283 7022.180118099054 6317.1994562509135 6367.6709387323535 6436.949220486328 6871.616305938833 6660.154432376482 6556.466277998865 6185.335965261499 6257.177130589681 0.991656147114089 1.0121563505098399 1.1222600817498798 1.0095925565807942 1.0176587310598093 1.0287305419272517 1.0981975038464744 1.064402412362078 1.0478313369052696 0.9885185981108047 1.0 12.611296229646477 -10.582523948292001 0.9763448684159584 1.0011780382899698 1.0446779938652608 0.19518570244952504 0.03768224910853016 0.7727233344011827 1.36486099401931 0.021897111660932618 0.0067240252117907835 2.615026243821811e-11 10.582523948292001 0.04349995557529107 QSLGES(ph)PR ddPTM_A549_MK2206_60min_R1 2 QSLGESPR 8 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 QSLGES(1)PR;QSLGES(1)PR 87.066 0.004208699999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QSLGES(ph)PR ddPTM_A549_PD325901_60min_R1 2 QSLGESPR 8 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 QSLGES(1)PR;QS(0.001)LGES(0.999)PR 132.25 1.1591e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QSLIPRT(ph)PK ddPTM_A549_MK2206_60min_R1 2 QSLIPRTPK 9 1 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QS(0.013)LIPRT(0.987)PK;QS(0.011)LIPRT(0.989)PK 42.843 0.029254000000000002 93767000.0 3005.5 3637.0 3675.8999999999996 3038.74 4572.1 3425.0 3230.6400000000003 2937.62 4600.1 5568.3 5131.700000000001 True False 3512.7549225798557 3822.107765116986 4197.197894094048 3783.23143641422 3899.5501466242476 3787.431226669 3817.605469918494 3354.0366310839413 3558.1846948502216 4310.417162647697 3857.3572622850897 0.9106636185674198 0.9908617494384686 1.0881019331892627 0.9807832614843257 1.0109382879184394 0.9818720354736689 0.9896945526007495 0.8695167190961767 0.922441053007976 1.117453445339988 1.0 11.913397056933544 -8.027239019997738 24.900477298767605 0.9540881053585862 0.997163120775882 0.0 0.06969648664023309 1135.860032178331 1038341.5374431529 0.00871706617222462 0.011269763244467112 9.392062630889929e-09 8.027239019997738 0.04307501541729575 QSLIPRT(ph)PK ddPTM_A549_PD325901_60min_R1 2 QSLIPRTPK 9 1 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QS(0.02)LIPRT(0.98)PK;QSLIPRT(1)PK 56.951 0.005743 153671000.0 4902.200000000001 3817.8999999999996 4633.6 4737.0 6005.6 6665.1 5764.0 6038.4 6252.799999999999 4871.7 5102.9 True False 5399.8677351910965 4139.647831921215 4948.063960100335 5029.59373149244 5583.787374195254 6610.821635406863 5983.352174181829 5917.959374966838 5990.016560697725 4564.100030590477 4475.275649948291 1.206600030381031 0.9250039898590482 1.1056445115637752 1.1238623327147579 1.247696859579984 1.4771875863072805 1.336979583425428 1.3223675674670936 1.3384687400801638 1.0198478010272312 1.0 12.127760831076046 -6.521795450306949 3.088531570041672 1.2185305475645902 1.0658299031381153 0.19762219652196555 0.14644140049754387 0.4231363604258844 8.245791370151606 0.025412934860661374 0.06040313121143324 3.0074924772247046e-07 6.521795450306949 -0.1527006444264749 QSLPAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 QSLPASPR 8 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QSLPAS(1)PR;QSLPAS(1)PR 118.23 0.0012472999999999998 157744000.0 7401.5 8846.3 7248.700000000001 7265.200000000001 10081.5 7726.7 7584.6 7714.099999999999 11655.400000000001 10625.1 10722.8 True False 8650.692250698658 9296.538884397683 8276.674657885016 9045.174326147224 8598.524704882293 8544.334265431638 8962.623643347397 8807.597298440456 9015.470509849198 8224.882530547568 8060.032825775197 1.0732825086064897 1.1534120375624601 1.0268785297520153 1.1222254948170485 1.0668101347410213 1.0600867825386135 1.1119835163308271 1.092749556834883 1.1185401728164932 1.0204527336719023 1.0 12.976569999034021 -10.849668271269863 1.0395874869899147 0.9987527631114277 1.0932583259547435 0.46427025313238834 0.03355896712848225 0.3263111528153738 0.612462190045408 0.02302051901331675 0.005328775531433929 1.4136169004731351e-11 10.849668271269863 0.0945055628433158 QSLPAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QSLPASPR 8 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QSLPAS(1)PR;QSLPAS(1)PR 110.38 0.0015989 202844000.0 10539.2 11057.0 10488.1 9493.8 12679.0 10752.0 10671.599999999999 11436.8 11362.0 11331.1 12662.8 True False 11609.131825451024 11988.812194544882 11199.885536068772 10080.210464015816 11788.470780175441 10664.439276814235 11077.713577723593 11208.684052003971 10884.494652419322 10615.65241222238 11105.355876102847 1.045363332338789 1.0795522744429207 1.0085120784079815 0.9076890985283057 1.061512202913061 0.9602969410248795 0.9975109038658782 1.0093043552186807 0.9801121885559032 0.9559038477160161 1.0 13.438968004983849 -5.884272153678282 5.514496803814394 0.9896987897423243 1.0615060322675274 0.38723864733516256 0.03714601524153169 0.1360168705732695 5.984061762667487 0.004362294982998085 0.014100358284755109 1.3053526234106179e-06 5.884272153678282 0.0718072425252031 QSLS(ph)PMSQRPVLK ddPTM_A549_MK2206_60min_R1 1 QSLSPMSQRPVLK 13 1 Q9NSV4-7;Q9NSV4-5;Q9NSV4-4;Q9NSV4;Q9NSV4-1;Q9NSV4-6 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 1 QS(0.002)LS(0.913)PMS(0.085)QRPVLK 101.96 3.8373e-05 19141000.0 1918.8 2504.6 2354.1 2297.6 3199.6 2415.6 1817.5 2387.4 3312.3 3610.1 4189.1 True False 2242.646529844028 2632.073441988452 2687.946778336406 2860.5121031431845 2728.9430784844894 2671.2171886544934 2147.716223898937 2725.821261105864 2562.069338656199 2794.575902676659 3148.8308567216445 0.7122156228419725 0.8358891162317921 0.8536332691857953 0.9084362524703412 0.8666527999302209 0.8483203163969211 0.6820678282272037 0.8656613788216652 0.8136573398939747 0.8874963533564288 1.0 11.620600548098338 -10.651425474275001 0.7747486263077398 1.0081896447385967 0.8230880452190698 0.2574749760451581 0.07164424623441074 0.48275138274751883 0.4805393283502147 0.05483451753008984 0.012371393424546205 2.2313850843790762e-11 10.651425474275001 -0.18510159951952698 QSLS(ph)PMSQRPVLK ddPTM_A549_PD325901_60min_R1 3 QSLSPMSQRPVLK 13 1 Q9NSV4-7;Q9NSV4-5;Q9NSV4-4;Q9NSV4;Q9NSV4-1;Q9NSV4-6 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 1 QS(0.018)LS(0.666)PMS(0.316)QRPVLK;QS(0.005)LS(0.994)PMS(0.001)QRPVLK;QS(0.039)LS(0.907)PMS(0.053)QRPVLK 97.579 4.5428e-05 81964000.0 15318.3 17401.1 18390.9 17866.100000000002 20528.8 18355.0 17923.6 19222.5 19671.4 20151.5 18297.9 True False 16873.40253926356 18867.551766165765 19639.017067465724 18969.648420142938 19086.92790851531 18205.522965580865 18605.69240617026 18839.09215774047 18844.679467136204 18879.130850923495 16047.374299944902 1.0514743548619971 1.1757407419748753 1.223814980593626 1.1821029450411753 1.189411273879294 1.1344860925717533 1.1594228475267845 1.1739672675177242 1.1743154434430376 1.1764622983205617 1.0 13.970049639866621 -10.678975620459296 0.7238324837433429 0.9876510170441234 1.1671746194751371 0.0 0.06615569544892207 0.3662679579399019 0.30460487324156166 0.03937858363452741 0.008026467179471503 2.0942300141782018e-11 10.678975620459296 0.17952360243101373 QSLS(ph)SADNLESDAQGHQVAAR ddPTM_A549_PD325901_60min_R1 2 QSLSSADNLESDAQGHQVAAR 21 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 QS(0.077)LS(0.528)S(0.394)ADNLES(0.001)DAQGHQVAAR;QS(0.086)LS(0.524)S(0.388)ADNLES(0.002)DAQGHQVAAR 73.574 9.701700000000001e-05 2929400.0 288.42 627.14 578.12 684.25 497.43 686.63 462.26 493.37 500.53 516.41 804.87 True False 317.7001860764179 679.9912887480211 617.3546997179735 726.5145684554998 462.4922328403397 681.038312931451 479.8515572583781 483.5293483087222 479.49446473996176 483.8037844689181 705.8760924913049 0.4500792553479651 0.9633295361344135 0.8745935813452673 1.0292381002611293 0.6552031408345746 0.9648128335495937 0.67979573520446 0.6850059854020036 0.6792898496500195 0.6853947734104306 1.0 9.463271148856187 -10.967146887296915 1.2646999194227218 0.9986969333648995 0.777623916594472 0.0 0.18693476314968824 0.5769390407034681 1.6567209589265022 0.10801974307269334 0.025633802966318894 1.078581862034796e-11 10.967146887296915 -0.22107301677042746 QSLSPMS(ph)QRPVLK ddPTM_A549_MK2206_60min_R1 1 QSLSPMSQRPVLK 13 1 Q9NSV4-7;Q9NSV4-5;Q9NSV4-4;Q9NSV4;Q9NSV4-1;Q9NSV4-6 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 1 QSLS(0.293)PMS(0.706)QRPVLK 88.19 5.347e-05 23174000.0 3258.3 3915.9 3725.4 3484.8 4381.4 3279.8 2782.2 3930.2 5206.6 5722.3 5901.1 True False 3808.221382213258 4115.202583838767 4253.7177384199695 4338.576156438618 3736.9018640054833 3626.8662590449626 3287.689726619876 4487.317885732704 4027.3134132317055 4429.628455690048 4435.694007925354 0.858540146233943 0.9277471747343353 0.958974566509718 0.9781053762245068 0.8424615984169956 0.8176547463744703 0.7411894780716811 1.0116382865263278 0.9079331004429103 0.9986325584622231 1.0 12.114944130667817 -10.175984587131449 0.6531989379415438 0.9995052587401114 0.8911133941803016 0.2419038308181506 0.07321404917140216 0.9363839633430318 0.7529450732325513 0.05111643657235054 0.01681097104434843 6.668304342332872e-11 10.175984587131449 -0.10839186455980987 QSLSS(ph)ADNLESDAQGHQVAAR ddPTM_A549_MK2206_60min_R1 1 QSLSSADNLESDAQGHQVAAR 21 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 QS(0.052)LS(0.164)S(0.783)ADNLESDAQGHQVAAR 69.763 2.1746e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QSLVPVDKS(ph)DDELKK ddPTM_A549_MK2206_60min_R1 1 QSLVPVDKSDDELKK 15 2 Q9NYY8-2;Q9NYY8 Q9NYY8-2 FASTKD2 FAST kinase domain-containing protein 2 1 QS(0.003)LVPVDKS(0.997)DDELKK 48.848 0.0053972000000000004 1866700.0 1480.9 1863.8 1491.1 1474.0 2047.9 1495.6 2055.8 1389.9 2126.1 1929.4 2443.4 True False 1730.83971547114 1958.659459066547 1702.5604015026624 1835.1300661703751 1746.6566228367249 1653.863399301068 2429.312249293777 1586.9225813902324 1644.54174468404 1493.5471999735048 1836.6363455906212 0.9423965281023231 1.0664383636798203 0.9269991882661763 0.9991798706238922 0.9510084165709131 0.9004849562471348 1.3226963819626276 0.8640374482406933 0.895409561414942 0.8131970183205829 1.0 10.842850285444916 QSLVPVDKS(ph)DDELKK ddPTM_A549_PD325901_60min_R1 1 QSLVPVDKSDDELKK 15 2 Q9NYY8-2;Q9NYY8 Q9NYY8-2 FASTKD2 FAST kinase domain-containing protein 2 1 QS(0.007)LVPVDKS(0.993)DDELKK 52.784 0.003899 2965700.0 3041.0 2708.0 2337.7 2923.4 3218.2 2951.9 2924.3 2569.3 2834.4 2685.7 3222.3 True False 3349.7200813341224 2936.212663726826 2496.350379732074 3103.9717784768827 2992.1647341872863 2927.8607050993246 3035.58583673836 2518.0532959231427 2715.2800248915105 2516.1244436555708 2825.9775278426755 1.1853314643627995 1.0390077892686935 0.8833581849597242 1.0983710053938134 1.0588069808437142 1.0360523663945855 1.074171965923486 0.8910379757497225 0.9608285975877273 0.8903554323647989 1.0 11.464534278076744 -8.22583859850249 24.976375783944825 0.9742006937674618 1.0477267562384673 0.3125047324459064 0.07648044741129575 747.4182143155292 524365.7807965669 0.011434500425296605 0.014761643625334784 5.945130628047485e-09 8.22583859850249 0.07352606247100557 QSMAFSILNT(ph)PK ddPTM_A549_MK2206_60min_R1 8 QSMAFSILNTPK 12 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QSMAFS(0.112)ILNT(0.888)PK;QSMAFS(0.004)ILNT(0.996)PK;QS(0.001)MAFS(0.004)ILNT(0.996)PK;QSMAFS(0.001)ILNT(0.999)PK;QSMAFSILNT(1)PK;QS(0.002)MAFS(0.03)ILNT(0.967)PK;QSMAFSILNT(1)PK;QSMAFSILNT(1)PK 163.99 3.03e-14 59359100.0 19720.899999999998 22755.6 24258.300000000003 22305.0 32539.6 25244.8 22947.000000000004 22932.600000000002 34932.6 34791.9 35069.2 True False 23049.305790286166 23913.762842973883 27698.49170932334 27769.726001309493 27753.067944947477 27916.187979857998 27116.172869220885 26183.366278142046 27020.421875899392 26932.38562597604 26360.549779318408 0.8743863835635882 0.9071799732240717 1.0507554637974448 1.0534577705620038 1.0528258392668879 1.059013875414696 1.02866492149171 0.9932784595670545 1.0250325619953002 1.0216928649608923 1.0 14.686092839259034 -5.678500774187718 5.27081214801404 1.0224722126446772 0.883812898194725 0.8487041886348297 0.022761026161495976 0.06376915007759366 2.9451391736307238 0.003697900050046211 0.014972998292628386 2.096521042960824e-06 5.678500774187718 -0.13865931444995228 QSMAFSILNT(ph)PK ddPTM_A549_PD325901_60min_R1 6 QSMAFSILNTPK 12 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QSMAFS(0.001)ILNT(0.999)PK;QSMAFS(0.455)ILNT(0.545)PK;QSMAFS(0.001)ILNT(0.999)PK;QSMAFS(0.015)ILNT(0.985)PK;QSMAFSILNT(1)PK;QSMAFSILNT(1)PK 117.92 2.2014e-05 87139800.0 20861.4 21896.4 24904.899999999998 23127.9 28759.0 25016.7 27153.5 27430.899999999998 27808.700000000004 26113.0 27591.6 True False 22979.233970649 23741.68647342249 26595.09627932985 24556.457855728102 26739.06705316393 24812.972289460457 28186.84130146535 26883.769180375253 26639.99704635922 24464.220723527535 24198.00811756319 0.9496332863022063 0.9811421815414015 1.0990613834874625 1.014813191913294 1.1050110787324023 1.0254138344325507 1.1648413854777997 1.1109909976789663 1.1009169398130587 1.011001426426133 1.0 14.562600675099517 -5.6308722142392655 5.287065901817836 1.0631974761585925 0.9572193138159669 0.39238563222975775 0.05018671422498909 0.1679611045590608 6.965434203340278 0.007570894802332911 0.031033537890652364 2.339525513739865e-06 5.6308722142392655 -0.10597816234262558 QSMAFSILNT(ph)PKK ddPTM_A549_MK2206_60min_R1 3 QSMAFSILNTPKK 13 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QSMAFSILNT(1)PKK;QSMAFSILNT(1)PKK;QSMAFS(0.009)ILNT(0.991)PKK 98.507 9.884200000000001e-05 54131000.0 8632.400000000001 9552.5 9253.0 8121.2 13071.0 9891.800000000001 9153.5 8989.699999999999 13877.4 13122.9 13987.9 True False 10089.338078082965 10038.681447973606 10565.214536318237 10110.894364574526 11148.273215048997 10938.543710354585 10816.572465176856 10264.017504801617 10734.191057654056 10158.427775750126 10514.318383599515 0.9595808030523933 0.9547629320063373 1.0048406516582293 0.9616309869735103 1.0602944297785712 1.0403473921254645 1.0287469021338371 0.9761942838645324 1.020911738263272 0.9661518136634976 1.0 13.360067706416613 -6.0075862120564025 1.4060786594005255 1.013063716119819 0.9548572810742727 0.28116477467903533 0.029537734182365993 0.3917484282498648 1.340896019431943 0.00379738669773543 0.021590239377903848 9.826837804938521e-07 6.0075862120564025 -0.058206435045546345 QSMAFSILNT(ph)PKK ddPTM_A549_PD325901_60min_R1 3 QSMAFSILNTPKK 13 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QSMAFS(0.004)ILNT(0.996)PKK;QSMAFSILNT(1)PKK;QS(0.002)MAFS(0.001)ILNT(0.997)PKK 125.18 1.9181e-06 77336000.0 17123.9 18585.300000000003 20057.4 17028.8 21797.4 19134.0 20872.0 22150.9 21976.4 20665.9 20916.6 True False 18862.305722051093 20151.54845611602 21418.615778944324 18080.630300789202 20266.425820947723 18978.179047857488 21666.295381596636 21709.08292245511 21052.808332989618 19361.05154713545 18343.99080125191 1.0282552976838502 1.0985367728564686 1.16760938287663 0.9856432276206366 1.1047991705035423 1.0345719889132465 1.1811113304809326 1.1834438404195853 1.1476678418064208 1.0554438102865886 1.0 14.163019916129443 -5.25392670553681 22.44019758663234 1.0872241753863823 1.028255180519114 0.0634138544693651 0.06764485254643164 618.9252658320036 1848504.7329703027 0.010541984164184394 0.14394783543265047 5.572797912888142e-06 5.25392670553681 -0.058968994867268254 QSMDMS(ph)PIK ddPTM_A549_MK2206_60min_R1 4 QSMDMSPIK 9 0 F5H658;Q14562 F5H658 DHX8 ATP-dependent RNA helicase DHX8 1 QS(0.001)MDMS(0.999)PIK;QS(0.035)MDMS(0.965)PIK;QS(0.009)MDMS(0.991)PIK;QS(0.009)MDMS(0.991)PIK 54.25899999999999 0.0056965 109446000.0 24375.4 26315.9 24863.8 23984.4 35985.3 29181.1 26852.1 26053.6 38058.8 36075.5 36566.9 True False 28489.37159868677 27655.266905703058 28389.860714158593 29860.57907670063 30691.910039438673 32269.024633153516 31730.778990787698 29746.777585803677 29438.542567414963 27926.019494477125 27486.329534901248 1.036492397521171 1.0061462324602963 1.0328720201840726 1.0863792867936273 1.116624538771795 1.1740026834859618 1.154420380156506 1.0822389925883769 1.0710248718380115 1.015996677876454 1.0 14.746426644881742 -4.219957696865331 16.1424152145161 1.0588038444504362 1.0737615642300156 0.0 0.05756334195953332 0.0 0.0 0.00879828500546511 0.0 6.026182821938641e-05 4.219957696865331 0.014957719779579381 QSMDMS(ph)PIK ddPTM_A549_PD325901_60min_R1 9 QSMDMSPIK 9 0 F5H658;Q14562 F5H658 DHX8 ATP-dependent RNA helicase DHX8 1 QS(0.002)MDMS(0.998)PIK;QSMDMS(1)PIK;QS(0.005)MDMS(0.995)PIK;QS(0.013)MDMS(0.987)PIK;QS(0.005)MDMS(0.995)PIK;QS(0.007)MDMS(0.993)PIK;QS(0.001)MDMS(0.999)PIK;QSMDMS(1)PIK;QS(0.002)MDMS(0.998)PIK 122.42 0.00011358 382828000.0 85426.4 87586.4 89569.6 81558.5 105580.0 81771.9 91723.6 96680.0 93279.59999999999 97042.3 101008.09999999999 True False 94098.82524040797 94967.61331249743 95648.3316817597 86596.18331220723 98164.42503122658 81105.97675778711 95214.19179107997 94751.64155600702 89359.38280054684 90915.03261665747 88584.74404310127 1.0622463975808725 1.0720538207604975 1.0797381954981053 0.9775518826365125 1.1081414310286237 0.9155749969579939 1.0748373528601394 1.069615796484158 1.0087446068260768 1.0263057550002332 1.0 16.434770640536353 -2.000000000167386 0.15273348220728442 0.9918093933008276 1.2966585700275375 0.08010749417253293 0.05156508078737938 78.65517338675902 0.7452623061646312 0.0797914335326126 5.382423539669011 0.009999999996145793 2.000000000167386 0.30484917672670986 QSMDMS(ph)PIKIVK ddPTM_A549_MK2206_60min_R1 1 QSMDMSPIKIVK 12 1 F5H658;Q14562 F5H658 DHX8 ATP-dependent RNA helicase DHX8 1 QS(0.177)MDMS(0.823)PIKIVK 52.522 0.006875 2470400.0 1622.4 2474.0 2248.7 2003.2 3250.1 1995.2 2158.1 2047.1 3595.4 2530.1 2931.4 True False 1896.2214561282847 2599.9160326916203 2567.599473448485 2493.9840899270657 2772.0145953814354 2206.3307396934274 2550.1988351011264 2337.2826939808197 2781.047640674002 1958.5486527692358 2203.4524774757915 0.8605683469518428 1.1799283439368775 1.1652620148131576 1.1318529060286784 1.2580323940350968 1.0013062510977924 1.1573650265525839 1.0607366021609597 1.2621318903414183 0.888854501193005 1.0 11.105550066573858 -5.25477171739169 24.082934653028886 1.1305684356448469 0.8605681377830897 0.2811875933376018 0.11077196254944485 383.1692772509054 1383905.6653613043 0.013874673166831848 0.1815757840204446 5.561965396679036e-06 5.25477171739169 -0.27000029786175717 QSMDMS(ph)PIKIVK ddPTM_A549_PD325901_60min_R1 2 QSMDMSPIKIVK 12 1 F5H658;Q14562 F5H658 DHX8 ATP-dependent RNA helicase DHX8 1 QS(0.03)MDMS(0.97)PIKIVK;QS(0.038)MDMS(0.962)PIKIVK 55.173 0.0053085 13993900.0 4664.7 5615.2 7509.9 6201.9 6411.2 8898.3 8336.1 8098.4 8215.2 7668.6 7030.2 True False 5138.256910029358 6088.412610546114 8019.566974697312 6584.97727746315 5960.89942943929 8825.835195021966 8653.334847188953 7936.871058928098 7869.94371312755 7184.403287268536 6165.529968109598 0.8333844676137045 0.9874921769965659 1.3007100794542366 1.0680310227219865 0.9668105516105294 1.4314803821686783 1.4035021955853273 1.287297458609484 1.2764423745945297 1.1652531614360693 1.0 12.590009193807987 -5.5517552321334875 4.927076518656204 1.1749628830729837 0.8637269957107767 0.3755100966770333 0.14884811031288253 0.16283980430537032 9.894167479500885 0.023758892542361763 0.10740174883086616 2.8070152227454685e-06 5.5517552321334875 -0.311235887362207 QSNAS(ph)SDVEVEEK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEK 13 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QSNAS(0.676)S(0.324)DVEVEEK 228.9 2.5657999999999998e-46 90947000.0 3871.1 3820.1 4351.4 3833.3 4633.8 2716.1 3694.2 3826.4 3864.6 4229.0 3555.4 True False 4264.091222246797 4142.033233642115 4646.7121710938745 4070.074234944049 4308.337873742169 2693.980982120086 3834.784802543808 3750.0794502472686 3702.1843015085137 3961.9802182743447 3118.108339537547 1.3675250369521197 1.32838015315928 1.490234355289604 1.3053023794380696 1.3817152595734203 0.8639792748572795 1.2298433489044682 1.2026777269719404 1.1873174047754838 1.2706358429040197 1.0 11.606455340407265 -2.000000000033221 0.09700775812567616 0.8719186144673295 2.462165095603606 0.2378717013299163 0.14778450947810265 73.60340381916477 0.4926105931611689 0.9344154329086121 15.629096124729285 0.009999999999235058 2.000000000033221 1.5902464811362766 QSNAS(ph)SDVEVEEKET(ph)SVSKEDTDHEEK ddPTM_A549_MK2206_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEK 27 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 QS(0.022)NAS(0.505)S(0.47)DVEVEEKET(0.571)S(0.401)VS(0.024)KEDT(0.006)DHEEK 56.547 0.0018445999999999998 15290000.0 1806.0 2532.7 2005.2 1713.9 3495.4 2366.8 1968.0 2330.4 3687.9 3347.3 3478.7 True False 2110.8086475392515 2661.6036119636474 2289.5675119664265 2133.805576939895 2981.231290328379 2617.2532050453124 2325.560125795384 2660.7413365506836 2852.5965383661514 2591.1426051991857 2614.84278276422 0.8072411318388555 1.0178828453885076 0.875604272294361 0.8160358974562105 1.1401187520638776 1.0009218230239236 0.8893690057101531 1.0175530835310653 1.090924684714924 0.9909362896609868 1.0 11.352508491805459 -6.730569745028555 0.6781574327627243 1.0370909469619234 0.8757108605102982 0.22485949433572805 0.09039932593515838 0.9131391309332606 0.7027849743961349 0.016724176120664614 0.07847133763698476 1.85964589152315e-07 6.730569745028555 -0.16138008645162516 QSNAS(ph)SDVEVEEKET(ph)SVSKEDTDHEEK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEK 27 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 QS(0.022)NAS(0.524)S(0.454)DVEVEEKET(0.597)S(0.389)VS(0.014)KEDTDHEEK 134.48 1.2296e-24 34656000.0 4464.2 4381.3 4340.8 4151.2 5653.8 3998.6 4611.1 4428.8 4779.9 5261.9 4439.4 True False 4917.402297629656 4750.52752717369 4635.3927913509 4407.610195940764 5256.696592551143 3966.0367273316065 4786.57793379074 4340.464109673611 4579.017425550006 4929.662735998529 3893.381943675251 1.263015642638892 1.2201545072891862 1.1905825984735547 1.1320775253249609 1.3501620618266283 1.0186610984248237 1.2294139139280886 1.114831314385849 1.176102805168797 1.2661646885188602 1.0 11.926808165750355 -14.999999998125565 0.1601558018777988 0.2692417599257489 1.2432052445212627 0.0 0.11090285738035871 33.938244600265925 0.35044085503767836 7.787583807443813 0.111401689972746 1.0000000043160456e-15 14.999999998125565 0.9739634845955139 QSNAS(ph)SDVEVEEKETSVSKEDT(ph)DHEEK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEK 27 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 QS(0.125)NAS(0.458)S(0.413)DVEVEEKET(0.071)S(0.053)VS(0.129)KEDT(0.751)DHEEK 67.71 0.00015471 26164000.0 3717.8 3678.1 2890.7 3719.7 4595.1 4139.2 3659.2 4523.6 3856.0 4645.6 4267.6 True False 4095.228319100295 3988.066395293072 3086.880285191218 3949.4574209483712 4272.356028234414 4105.491727547386 3798.4528583910705 4433.373249304452 3693.945729601206 4352.276023176945 3742.712254545323 1.0941873274192693 1.0655551707053568 0.8247709348861557 1.0552393965504474 1.14151335653599 1.096929565600852 1.014893104266312 1.1845348901509483 0.9869702713894468 1.1628668535475415 1.0 11.869868420557465 QSNAS(ph)SDVEVEEKETSVSKEDT(ph)DHEEKAS(ph)NEDVTK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEKASNEDVTK 35 3 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 3 QS(0.105)NAS(0.468)S(0.427)DVEVEEKET(0.032)S(0.032)VS(0.184)KEDT(0.752)DHEEKAS(1)NEDVTK 111.82 2.7949e-15 37823000.0 5282.4 4690.4 5094.2 4892.2 6952.3 4460.9 5736.4 6730.8 6752.8 6990.3 6782.5 True False 5818.665359302649 5085.676468960232 5439.923045913135 5194.380083007667 6463.994432132949 4424.571909406683 5954.701841078527 6596.548913789551 6469.003299494565 6548.931265027942 5948.295497809927 0.9782071790893702 0.8549804680740394 0.9145347684754452 0.873255218225147 1.086696925953476 0.7438386191532925 1.0010770048782813 1.1089813739445697 1.0875389936287387 1.100976114491817 1.0 12.538260603645503 -7.988339097287045 24.950021623224803 1.0479215414589027 0.909538431276803 0.4489700011566793 0.084360735534412 165.96390980007334 355099.9866403001 0.012363504762962932 0.017075248484325515 1.02721393591575e-08 7.988339097287045 -0.1383831101820997 QSNAS(ph)SDVEVEEKETSVSKEDT(ph)DHEEKASNEDVTK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEKASNEDVTK 35 3 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 QS(0.029)NAS(0.514)S(0.458)DVEVEEKET(0.325)S(0.289)VS(0.012)KEDT(0.375)DHEEKASNEDVTK 115.83 3.5775e-21 79732000.0 8638.6 7898.6 8478.4 7798.9 10438.0 8392.8 8528.7 12975.0 8771.9 10990.0 9859.3 True False 9515.584312598796 8564.24274213911 9053.795208760926 8280.620340413 9704.870889145146 8324.451819423972 8853.264345583713 12716.203446309406 8403.247548103951 10296.089524434867 8646.668603252107 1.100491385667294 0.9904673273725333 1.0470847934840124 0.9576659775417514 1.1223826579285157 0.962735152853326 1.0238931028597422 1.4706477176107688 0.9718479953011496 1.1907579666650339 1.0 13.07792868153686 QSNAS(ph)SDVEVEEKETSVSKEDTDHEEKASNEDVTK ddPTM_A549_MK2206_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEKASNEDVTK 35 3 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QS(0.05)NAS(0.475)S(0.475)DVEVEEKETSVSKEDTDHEEKASNEDVTK 136.2 3.1755e-30 84375000.0 3921.5 5094.1 4796.7 3953.6 6169.9 3919.3 3765.7 3304.7 7634.2 7840.1 9340.6 True False 4583.353328529998 5353.367931339683 5476.944187437338 4922.23217748385 5262.315883217108 4334.037724579215 4449.8789459896725 3773.1513452192958 5905.065889312308 6069.015964814074 7021.071232554536 0.6527997191195563 0.7624716733420638 0.7800724427979653 0.7010656941722769 0.7495032750582813 0.61729009449208 0.6337891752695742 0.5374039402597655 0.841049135341676 0.8644002836310681 1.0 12.777475449663356 -9.216273945062918 1.7816424525543855 0.9492293705133179 0.6865829298518284 0.5916941742430781 0.07990042726464773 0.13729148295901347 0.9004340485434189 0.01766239514484025 0.016123257028230486 6.077515217355929e-10 9.216273945062918 -0.26264644066148946 QSNASS(ph)DVEVEEK ddPTM_A549_MK2206_60min_R1 4 QSNASSDVEVEEK 13 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QSNAS(0.02)S(0.98)DVEVEEK;QSNAS(0.008)S(0.992)DVEVEEK;QSNAS(0.008)S(0.992)DVEVEEK;QSNAS(0.012)S(0.988)DVEVEEK 223.07 5.1596e-46 204677000.0 11780.0 11678.0 10912.6 8757.38 16476.100000000002 13806.3 11875.9 14173.699999999999 19177.4 16038.900000000001 15407.100000000002 True False 13768.176006651385 12272.36031922907 12460.170771536412 10902.93849313372 14052.4875157577 15267.273502119777 14033.59730586047 16182.86538013578 14833.749520014915 12415.70135050017 11581.091855672115 1.18884956429286 1.0596894033975208 1.0759063935265953 0.9414430546800082 1.21339919334766 1.3182931015819779 1.2117680682229615 1.3973523033762862 1.2808593269856272 1.0720665637773423 1.0 13.499483655372819 -6.8007498855338495 24.99956153437785 1.1808715443314846 1.066661054793529 0.23699913976311027 0.1179582295254394 262.8791149918434 167177.56848441518 0.021480636670394584 0.04059504657802336 1.5821589578560478e-07 6.8007498855338495 -0.11421048953795565 QSNASS(ph)DVEVEEK ddPTM_A549_PD325901_60min_R1 3 QSNASSDVEVEEK 13 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QSNAS(0.019)S(0.981)DVEVEEK;QSNAS(0.077)S(0.923)DVEVEEK;QSNAS(0.325)S(0.675)DVEVEEK 284.24 1.2165999999999997e-98 162453000.0 20757.5 21925.4 23165.300000000003 21599.800000000003 25757.1 18908.8 21714.300000000003 23223.3 22256.0 24694.4 20677.1 True False 22864.786119136144 23773.130405198 24737.436562265255 22933.97058929499 23948.01015317113 18754.81300199265 22540.64956902089 22760.093063173594 21320.65771732481 23135.191369627322 18133.94778293634 1.2608829799681802 1.310973798411839 1.3641506448773753 1.2646981707356282 1.3206175753801221 1.0342377306082535 1.243008408253561 1.2551096614820056 1.1757317255201924 1.275794528944053 1.0 14.146405415324672 -14.999999999890688 0.09492843131503528 0.13286979761752735 1.4485025486114396 0.0 0.1107451651940748 49.98402475663059 0.3438512046985471 8.57699561460403 0.595619173790355 1.0000000002516994e-15 14.999999999890688 1.3156327509939123 QSNASS(ph)DVEVEEKET(ph)SVSKEDTDHEEK ddPTM_A549_MK2206_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEK 27 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 QS(0.01)NAS(0.176)S(0.814)DVEVEEKET(0.575)S(0.404)VS(0.02)KEDTDHEEK 96.027 1.7576e-09 15910000.0 2060.0 2177.9 2225.8 2009.1 3470.2 2528.0 2434.0 2662.3 3850.8 3403.7 3548.8 True False 2407.67763783547 2288.745807436975 2541.4519091037664 2501.329590191927 2959.7381769461413 2795.5112820494105 2876.2262937936825 3039.689177951805 2978.5999484639956 2634.801806027685 2667.535018102642 0.9025852037541374 0.8580002856213332 0.9527342253641508 0.9376932535907501 1.1095405146926007 1.0479754766397762 1.0782337529872346 1.1395123802775298 1.1166113765144148 0.9877290412861236 1.0 11.381291494835093 -6.648001147200558 4.738323631318678 1.0670173765830437 0.9065485057887943 0.7087944660595772 0.04822594403075464 0.10106906475593037 3.766324358586463 0.007866192202829518 0.01669020144928881 2.2490486649053775e-07 6.648001147200558 -0.16046887079424943 QSNASS(ph)DVEVEEKETSVSK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEKETSVSK 19 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QSNAS(0.19)S(0.81)DVEVEEKETSVSK 207.97 1.3916999999999996e-66 116510000.0 24894.0 24298.0 24877.0 20776.0 28153.0 20958.0 24366.0 25646.0 27809.0 29001.0 25879.0 True False 27421.2205540058 26345.6777338384 26565.302817553507 22059.286334280547 26175.63040257743 20787.324996602743 25293.261463586798 25134.4704111022 26640.284438402483 27169.871910658385 22696.047060497338 1.2081936771153716 1.1608046838999235 1.1704814828213255 0.9719439810589273 1.153312307328457 0.9159006826692415 1.1144346588710565 1.1074382399765534 1.173785213230815 1.197119121150739 1.0 14.470153426721122 -11.045001180440828 1.3581255964171766 1.0002534642962302 1.111827705008545 0.0 0.10242246124210885 0.5948330940840835 1.9634746538945977 0.060083363736746574 0.013556584668334879 9.015686870799246e-12 11.045001180440828 0.11157424071231481 QSNASS(ph)DVEVEEKETSVSKEDT(ph)DHEEK ddPTM_A549_MK2206_60min_R1 2 QSNASSDVEVEEKETSVSKEDTDHEEK 27 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 QS(0.008)NAS(0.165)S(0.827)DVEVEEKET(0.021)S(0.009)VS(0.089)KEDT(0.881)DHEEK;QSNAS(0.055)S(0.945)DVEVEEKET(0.042)S(0.014)VS(0.03)KEDT(0.914)DHEEK 169.05 1.1728e-48 40489000.0 2786.7 3918.5 3933.3 3324.4 5180.6 4624.4 3388.6 4788.6 5341.7 4769.8 4316.299999999999 True False 3257.026831726264 4117.934912733271 4491.101084588839 4138.878149237989 4418.540602699321 5113.750938571719 4004.264757251135 5467.3987144724515 4131.813478942074 3692.298867230031 3244.4435861802403 1.003878398625768 1.269226849951616 1.3842438511548656 1.2756819588010737 1.3618793131494615 1.5761565281497956 1.234191518788419 1.6851575838029438 1.273504491353032 1.1380376231405094 1.0 11.663755365571228 -10.03194711386662 0.983916980529535 1.0314039249665419 1.3477266532617167 0.25713653827606675 0.17338531220972403 0.3814476459461458 0.7446467154537594 0.06307654857197771 0.032284523049094356 9.290795183848037e-11 10.03194711386662 0.3163227282951748 QSNASS(ph)DVEVEEKETSVSKEDT(ph)DHEEK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEK 27 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 QS(0.223)NAS(0.251)S(0.525)DVEVEEKET(0.056)S(0.054)VS(0.293)KEDT(0.597)DHEEK 63.295 0.00027267 22191000.0 3176.7 3956.2 4185.4 3422.0 4765.4 4097.0 4388.4 4333.7 5409.7 4470.1 5232.2 True False 3499.196245437061 4289.602858285108 4469.446412854785 3633.3691680741244 4430.694743737523 4063.6353903560184 4555.40296342462 4247.260953778119 5182.349121738501 4187.85712312796 4588.672569648526 0.7625726595927251 0.9348243513076971 0.9740172882278952 0.7918126893835935 0.9655722164715047 0.8855797245666793 0.9927496229641736 0.9255968669177548 1.12937871314175 0.912651111963897 1.0 12.163861149813316 -8.2065913434616 1.3948044657747478 1.0584423922862856 0.8903112398542531 0.1869792533362692 0.08642365394710516 0.2602221302462917 0.989407731683344 0.01416586199201006 0.01883529535977095 6.214535261137758e-09 8.2065913434616 -0.16813115243203247 QSNASS(ph)DVEVEEKETSVSKEDT(ph)DHEEKASNEDVTK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEKASNEDVTK 35 3 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 QS(0.001)NAS(0.176)S(0.823)DVEVEEKET(0.053)S(0.202)VS(0.166)KEDT(0.578)DHEEKAS(0.001)NEDVTK 116.86 2.1244e-21 109400000.0 3181.0 3728.7 4278.4 3739.3 4316.3 3843.4 4329.4 5470.3 4496.7 4200.1 4374.1 True False 3503.9327782715695 4042.9306348737864 4568.757952109213 3970.2680684335373 4013.137978426632 3812.1006246752095 4494.157686138581 5361.190575132669 4307.719336695476 3934.904969206448 3836.1134297044487 0.9134069788289676 1.0539132142360221 1.1909861467420713 1.0349714994583528 1.0461468494000767 0.9937403297714559 1.1715393114652586 1.3975578859631685 1.122938467705154 1.0257530287652654 1.0 11.905429664573052 -7.746775086906541 24.993904883309963 1.098130506504484 1.0466142341927789 0.1121659710815417 0.11758991712851187 797.2579888119976 1358846.8496948297 0.020208862644134337 0.0299003335599899 1.7915334159085955e-08 7.746775086906541 -0.05151627231170508 QSNASS(ph)DVEVEEKETSVSKEDTDHEEK ddPTM_A549_PD325901_60min_R1 2 QSNASSDVEVEEKETSVSKEDTDHEEK 27 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QS(0.002)NAS(0.082)S(0.916)DVEVEEKETSVSKEDTDHEEK;QSNAS(0.013)S(0.986)DVEVEEKETSVSKEDTDHEEK 261.29 1.5678999999999996e-126 1338670000.0 21369.2 19593.0 21000.6 18859.8 27072.7 18791.6 22636.5 23548.2 21705.7 25312.9 25806.2 True False 23538.585452826417 21244.170871639482 22425.827002866678 20024.72701228649 25171.206947744737 18638.567439935126 23497.944394668106 23078.512677794457 20793.484912605003 23714.63917407345 22632.20099898011 1.040048444863456 0.938670121946903 0.9908813996428039 0.8847891998303159 1.1121855514131853 0.8235419719352549 1.0382527265345076 1.019720206569147 0.9187566385409016 1.047827348968053 1.0 14.46608927418099 -5.246850725368595 23.20485146350784 0.9661111581268028 1.0400485882026513 0.032433421503070714 0.07850322228225855 1836.5436449825675 2921085.896331398 0.009111978108231465 0.24766594493412805 5.664339488664017e-06 5.246850725368595 0.07393743007584852 QSNASSDVEVEEKET(ph)SVSKEDTDHEEK ddPTM_A549_PD325901_60min_R1 1 QSNASSDVEVEEKETSVSKEDTDHEEK 27 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QSNASSDVEVEEKET(0.497)S(0.497)VS(0.006)KEDTDHEEK 153.89 5.797699999999999e-35 22308000.0 6412.4 6565.9 7369.2 5897.3 7650.8 6633.6 6167.6 7199.7 6588.6 8388.7 7622.3 True False 7063.382127440616 7119.2314360280525 7869.318226599486 6261.562827259944 7113.434201827135 6579.578160963073 6402.311393040221 7056.096335444615 6311.704054473686 7859.036050375498 6684.805421740745 1.0566324196166788 1.0649870844219997 1.1771948067488087 0.9366858767340774 1.064119858850697 0.9842587399125418 0.9577408748829429 1.055542516240837 0.9441866526056786 1.1756566653108325 1.0 12.706669852284358 -6.272445072647657 24.99961495437272 0.9830725951506507 1.096143004928597 0.1085765115366536 0.07544042658356032 402.67739720628964 914688.0652153954 0.006646840157064478 0.015576321061227317 5.340168090272799e-07 6.272445072647657 0.11307040977794625 QSNASSDVEVEEKETSVSKEDT(ph)DHEEKASNEDVTK ddPTM_A549_PD325901_60min_R1 2 QSNASSDVEVEEKETSVSKEDTDHEEKASNEDVTK 35 3 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QSNASSDVEVEEKETSVSKEDT(0.999)DHEEKASNEDVTK;QSNASSDVEVEEKET(0.013)S(0.013)VS(0.002)KEDT(0.972)DHEEKASNEDVTK 163.94 5.221499999999999e-52 78050000.0 6202.799999999999 6927.7 7226.1 6776.6 9062.2 7368.7 7406.700000000001 7918.299999999999 7677.200000000001 7834.8 8284.0 True False 6832.503689739984 7511.521591765265 7716.506600069273 7195.175191224751 8425.702334892803 7308.691750284703 7688.5660216017595 7760.363294713818 7354.553982182158 7340.109390904664 7265.120516602648 0.940452904274055 1.0339156211654752 1.0621305706402382 0.9903724480250459 1.1597470841175903 1.0059973173992756 1.0582847186129163 1.068167180018475 1.0123099768785846 1.0103217660506314 1.0 12.826771014696787 -8.922222881129269 7.72641747273463 1.0053871761223376 1.0422518818710407 0.07115215369926398 0.05189367709370918 0.41769892218840177 35.792398314349384 0.008493989530941147 0.009006662006406686 1.1961265183267312e-09 8.922222881129269 0.03686470574870304 QSNASSDVEVEEKETSVSKEDTDHEEKAS(ph)NEDVTK ddPTM_A549_PD325901_60min_R1 2 QSNASSDVEVEEKETSVSKEDTDHEEKASNEDVTK 35 3 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QSNASSDVEVEEKETSVSKEDT(0.001)DHEEKAS(0.998)NEDVT(0.001)K;QSNASSDVEVEEKETSVSKEDTDHEEKAS(0.98)NEDVT(0.02)K 193.81 3.1456999999999994e-78 120176000.0 11355.6 10774.8 10871.2 10439.5 13577.0 11559.0 10339.400000000001 12546.900000000001 13069.5 12901.7 12724.2 True False 12508.41215244912 11682.830210163882 11608.98500583622 11084.324205175284 12623.398358107259 11464.867336374238 10732.87152493678 12296.642236647367 12520.234365410528 12087.084460182097 11159.20406534952 1.120905405009039 1.0469232520301581 1.0403058262805065 0.9932898565403292 1.1312095633508676 1.0273911355357175 0.9617954346998145 1.101928252645698 1.1219648186457265 1.083149334791156 1.0 13.445946509590806 QSNQDAQDIERAS(ph)FR ddPTM_A549_MK2206_60min_R1 2 QSNQDAQDIERASFR 15 1 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 QSNQDAQDIERAS(1)FR;QSNQDAQDIERAS(1)FR 146.1 3.3408999999999997e-14 12744000.0 1194.94 1199.49 919.41 833.38 2435.0 1861.1399999999999 1403.25 1429.52 3080.0 1515.8 1568.35 True False 1396.6166585219007 1260.538917563973 1049.7961630645586 1037.55813741185 2076.814725624996 2058.084599475255 1658.2023610377908 1632.1588377213932 2382.384917749327 1173.3797272311792 1178.885410742019 1.1846924610279437 1.0692633109867389 0.8904989013340927 0.8801178875890795 1.7616765011264313 1.7457885055849887 1.4065848520375512 1.3844932025192107 2.02087912535095 0.9953297551562925 1.0 10.203207777883492 -6.752884569767916 24.999741971599097 1.5155446192522184 1.0023913576572239 0.35228279765959225 0.3014494141239068 189.072955507078 552523.9505944398 0.05414669608675914 0.11132785042586021 1.7665072746106177e-07 6.752884569767916 -0.5131532615949945 QSNQDAQDIERAS(ph)FR ddPTM_A549_PD325901_60min_R1 2 QSNQDAQDIERASFR 15 1 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 QSNQDAQDIERAS(1)FR;QSNQDAQDIERAS(1)FR 51.348 0.006034899999999999 11792600.0 1215.0900000000001 1116.44 1245.81 1042.75 1256.94 1127.21 1010.79 1170.2 1322.74 1403.51 1279.63 True False 1338.4450422980199 1210.5263169465206 1330.3581582641125 1107.1582992429255 1168.6568706075964 1118.0303754852848 1049.2561665755115 1146.859442995859 1267.149837752256 1314.892139075485 1122.243622242908 1.192651057016491 1.078666247643423 1.1854450601423496 0.986557889302295 1.041357551466345 0.996245693293224 0.9349629133810319 1.0219344715042835 1.129121888186577 1.1716637216859838 1.0 10.132170182043035 -6.256982129898366 24.903182577760152 1.0403905387143184 1.1448953350062878 0.364892765578959 0.06832525891895563 336.2210126089009 1878498.012020748 0.009489705093500292 0.024223826063582945 5.533728786188664e-07 6.256982129898366 0.1045047962919694 QSNVAAPGDAT(ph)PPAEK ddPTM_A549_MK2206_60min_R1 2 QSNVAAPGDATPPAEK 16 0 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 QSNVAAPGDAT(1)PPAEK;QSNVAAPGDAT(1)PPAEK 142.39 3.2046e-14 16351900.0 2972.3 3436.5 3318.0 2856.4 4334.0 3497.3 3998.7 3462.3 5758.1 4356.5 5051.200000000001 True False 3473.9515742419267 3611.403171521725 3788.5422923920833 3556.218128228667 3696.474341215084 3867.3819646801444 4725.212029988821 3953.0916278490545 4453.899543796234 3372.3636242793473 3796.847633972064 0.9149568034173812 0.9511583080682285 0.9978125691677303 0.9366238709211349 0.9735640451149802 1.0185770769616822 1.2445092575509937 1.041150978111159 1.1730519560345898 0.88820093650989 1.0 11.890586389986368 -7.527030753493877 24.992967851118646 1.0929598537499634 0.9600041200210448 0.25620770228219203 0.08888264499796653 92.67237123151672 557839.3865273566 0.011893194889591428 0.017682356708123556 2.971455607978922e-08 7.527030753493877 -0.13295573372891856 QSNVAAPGDAT(ph)PPAEK ddPTM_A549_PD325901_60min_R1 1 QSNVAAPGDATPPAEK 16 0 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 QSNVAAPGDAT(1)PPAEK 126.01 1.8153999999999998e-08 10547000.0 2993.4 2761.4 2580.8 2974.2 3155.0 2899.8 2421.1 3693.1 2944.2 3270.9 3806.7 True False 3297.28776437539 2994.1128691341423 2755.948607611132 3157.909579101711 2933.403684159122 2876.1849902256263 2513.2362853767563 3619.438223319096 2820.4655127312963 3064.3748157847126 3338.5000326595014 0.9876554536825087 0.8968437441496698 0.8255050413810241 0.9459067090636123 0.8786591749176431 0.8615201324213894 0.7528040319875848 1.0841510222888315 0.844830158795736 0.9178897066966879 1.0 11.704984339006414 -10.991167924198246 1.132464193249845 1.003074003415284 0.8912203689780774 0.036614851499687906 0.08648071766651001 0.6983063846517531 1.5174978871853417 0.06433980043976971 0.013097915495626892 1.0205448038047273e-11 10.991167924198246 -0.11185363443720664 QSNVAAPGDAT(ph)PPAEKK ddPTM_A549_MK2206_60min_R1 2 QSNVAAPGDATPPAEKK 17 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 QSNVAAPGDAT(1)PPAEKK;QSNVAAPGDAT(1)PPAEKK 99.441 3.0835000000000003e-07 34007000.0 7706.200000000001 8299.2 7938.200000000001 6627.6 9311.8 6762.2 6734.6 6840.1 10303.0 11019.900000000001 11786.3 True False 9006.818161498884 8721.593831250724 9063.956125818813 8251.362297524269 7942.046555266866 7477.771515614923 7958.189645925608 7809.705121927713 7969.386950510168 8530.496936347057 8859.436424668385 1.0166355657138784 0.9844411555306329 1.0230849561244053 0.9313642428257645 0.8964505386768032 0.8440459592659497 0.898272673842624 0.8815126321333736 0.8995365583661794 0.9628712851976202 1.0 13.112999212201256 -6.271082424684247 23.017398451880524 0.9297656736562906 1.0056926186598505 0.4682168871707614 0.04220835437001753 227.97028832035338 544154.4999166391 0.007910658162159172 0.01863411017223622 5.356949783956256e-07 6.271082424684247 0.0759269450035599 QSNVAAPGDAT(ph)PPAEKK ddPTM_A549_PD325901_60min_R1 2 QSNVAAPGDATPPAEKK 17 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 QSNVAAPGDAT(1)PPAEKK;QSNVAAPGDAT(1)PPAEKK 98.3 7.38e-07 60460000.0 8910.0 9664.2 10174.4 9903.5 11919.0 10298.3 11398.8 10920.4 10768.7 10691.7 11899.7 True False 9814.536640804676 10478.636050512849 10864.89596763743 10515.216702519607 11081.850558317768 10214.434059190477 11832.587571662703 10702.584055111924 10316.128988162996 10016.624237343067 10436.112338413384 0.9404399188651118 1.0040746698311154 1.0410865287110578 1.007579868972381 1.0618753611464629 0.9787585384255638 1.133811824553589 1.025533619039123 0.9885030606839339 0.9598041792319291 1.0 13.349296758637268 -3.511999998997595 16.6303637927245 1.0091948959577057 0.4924258927535914 0.0 0.05065321064643686 0.0 0.0 0.006191405362497404 0.0 0.0003076096821840716 3.511999998997595 -0.5167690032041143 QSNVEDS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 QSNVEDSPEK 10 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 QSNVEDS(1)PEK 97.195 0.0005205 5630400.0 3576.5 4007.5 4054.2 3569.4 5948.8 4145.6 3621.2 4686.8 5036.3 5337.2 5665.7 True False 4180.125762970175 4211.464632583536 4629.146522548519 4443.903160236453 5073.739400327711 4584.284640373435 4279.12516642797 5351.168252723026 3895.586091318488 4131.522813153613 4258.750324634843 0.9815381143125806 0.9888968151577747 1.086972977911175 1.0434758606370016 1.1913681276355987 1.0764389294802117 1.0047842301708245 1.2565113812305608 0.9147251645123164 0.9701256232972195 1.0 12.056214436957072 QSPAS(ph)PPPLGGGAPVR ddPTM_A549_MK2206_60min_R1 3 QSPASPPPLGGGAPVR 16 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 QS(0.043)PAS(0.957)PPPLGGGAPVR;QS(0.028)PAS(0.972)PPPLGGGAPVR;QS(0.069)PAS(0.931)PPPLGGGAPVR 120.77 9.5458e-08 127510000.0 8924.2 9129.099999999999 8179.4 8850.1 11420.2 8366.1 7829.3 8417.8 12325.2 12193.9 14109.2 True False 10430.386784257918 9593.732196461217 9339.361912716025 11018.374897296084 9740.303708247464 9251.395149032274 9251.782465899285 9611.048928431323 9533.561879300007 9439.289520968643 10605.496245889826 0.9834888007527445 0.9046000275733708 0.8806152674218811 1.0389306301028836 0.918420362651331 0.8723208169177057 0.872357337308457 0.9062328348997434 0.8989265243476703 0.890037514711002 1.0 13.37252450770074 -10.788746639309805 1.0351120565937793 1.00001036191565 0.9174112870745244 0.0 0.05753955180331586 0.5563053023578587 1.0578324131009265 0.03333792770105972 0.008368636524925279 1.6264973524486746e-11 10.788746639309805 -0.08259907484112561 QSPAS(ph)PPPLGGGAPVR ddPTM_A549_PD325901_60min_R1 2 QSPASPPPLGGGAPVR 16 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 QS(0.062)PAS(0.938)PPPLGGGAPVR;QS(0.129)PAS(0.871)PPPLGGGAPVR 99.344 2.1515e-06 250840000.0 12832.0 14844.7 13322.3 13397.2 15528.599999999999 13446.5 12495.7 15493.7 13431.6 15175.800000000001 18559.4 True False 14134.69519358087 16095.714966479178 14226.431391497901 14224.714616751207 14437.924706761753 13336.996162172865 12971.230701409417 15184.665998927487 12867.116561647199 14217.597398081763 16276.711457729976 0.8683999363316206 0.988880033186013 0.8740359763975311 0.8739305020975687 0.8870295909745967 0.8193913246424842 0.7969196194879554 0.9329074879997418 0.7905231099698873 0.8734932381767867 1.0 13.990521626889027 -11.033104253980245 1.329147056239926 0.999943040511861 0.8632838680919593 0.008356415708172471 0.06569587679138154 0.3424139935423591 1.078701777597793 0.04177929583434583 0.009399458982133062 9.266073611898113e-12 11.033104253980245 -0.13665917241990166 QSPEDVY(ph)FSK ddPTM_A549_MK2206_60min_R1 1 QSPEDVYFSK 10 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 QSPEDVY(0.999)FS(0.001)K 147.62 3.6736e-08 8040300.0 5339.5 6603.1 5494.2 4886.8 6833.6 5171.5 4704.0 5764.6 8083.8 7484.3 6770.0 True False 6240.677061758492 6939.169585879556 6273.360175666239 6084.066219376789 5828.3864924151785 5718.744697436127 5558.655910437744 6581.749703347095 6252.832207175977 5793.591431927903 5088.822157505319 1.2263500017492934 1.3636101579311877 1.2327725319333251 1.1955745418227322 1.145331141867299 1.1237855284452725 1.0923266206580797 1.2933738888162778 1.2287385987647261 1.1384935949044996 1.0 12.313116058023104 -14.542098069574237 0.24258294345807085 1.308637043792313e-13 1.23655180110347 0.22822647314981603 0.08374463894346398 21.821848182692282 0.339292567683552 10.451196961245962 0.04388402610800611 2.8701323940872796e-15 14.542098069574237 1.2365518011033392 QSPGST(ph)SPKPPHTLSR ddPTM_A549_PD325901_60min_R1 1 QSPGSTSPKPPHTLSR 16 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QS(0.003)PGS(0.072)T(0.463)S(0.463)PKPPHTLSR 75.358 0.00028483 51702000.0 3600.6 3483.8 4168.8 3646.8 5023.9 4215.2 4479.3 4561.8 4763.1 4854.9 4711.1 True False 3966.1302613783764 3777.392052397166 4451.719837030873 3872.0545535162805 4671.038595514106 4180.8728087451045 4649.762212667014 4470.811320337131 4562.923471126428 4548.36078545758 4131.664566123457 0.9599352023631499 0.9142542895105621 1.0774640016838803 0.9371657576619885 1.1305464228178421 1.0119100284725722 1.125396831773704 1.082084774498497 1.1043789731961713 1.100854319769983 1.0 12.01250741678523 -5.896119228178885 1.0761165464413238 1.0585405882537833 0.9256716686133822 0.363923314242818 0.05973052958312076 0.7071404012547272 1.1712496224295859 0.009136004780536645 0.08250821049787375 1.2702253385291226e-06 5.896119228178885 -0.13286891964040104 QSPGSTS(ph)PKPPHTLSR ddPTM_A549_MK2206_60min_R1 2 QSPGSTSPKPPHTLSR 16 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QS(0.002)PGS(0.036)T(0.191)S(0.771)PKPPHTLSR;QS(0.002)PGS(0.036)T(0.191)S(0.771)PKPPHTLSR 73.294 0.00025601 61464000.0 6270.299999999999 5974.200000000001 4573.6 4766.6 6414.099999999999 5378.2 4961.700000000001 4919.1 7459.9 9333.4 8858.3 True False 7328.573345883375 6278.261262128651 5222.205252707781 5934.417213980802 5470.594386706892 5947.317554239775 5863.176664714919 5616.397489111944 5770.244561012407 7224.978457672181 6658.539633357368 1.1006277276130234 0.9428886224054848 0.7842868767418663 0.891249063721282 0.821590722281022 0.8931864765729447 0.8805499385093528 0.843487881483112 0.8665931088109984 1.0850695280804694 1.0 12.700990081367411 -10.732096556268827 0.9805614787316866 1.000154722357042 0.8857230259056215 0.3007072141473037 0.08235942493986666 0.666363017687114 1.136123493446628 0.05297202884586955 0.013593515280503008 1.8531195753425542e-11 10.732096556268827 -0.11443169645142048 QSPGSTS(ph)PKPPHTLSR ddPTM_A549_PD325901_60min_R1 1 QSPGSTSPKPPHTLSR 16 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QS(0.002)PGS(0.039)T(0.24)S(0.72)PKPPHTLSR 89.01100000000001 5.0005e-06 49472000.0 2338.5 2706.1 2451.1 2460.5 3532.2 2716.4 3195.3 2752.4 3254.1 3309.3 3266.4 True False 2575.9027984872887 2934.1525440587766 2617.4463856616712 2612.479496799061 3284.110457428478 2694.2785390195504 3316.89889003525 2697.501222783971 3117.3414934375733 3100.3502332313283 2864.6535074156063 0.8992022217762669 1.0242608875604888 0.9137043551291629 0.9119705018551971 1.146425021011107 0.9405251043607845 1.1578708843666208 0.9416500864069824 1.0882089178910623 1.0822775687201205 1.0 11.484144933814063 -6.728160041400917 24.999999216682554 1.042061973395647 0.9418127574463867 0.3478406500596648 0.07416548970412613 173.40226069337146 130261.89652097163 0.009611353321207279 0.02000664044463694 1.8699929042683016e-07 6.728160041400917 -0.1002492159492604 QSPLT(ph)YEDHGAPFAGHLPR ddPTM_A549_PD325901_60min_R1 1 QSPLTYEDHGAPFAGHLPR 19 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 QS(0.32)PLT(0.68)YEDHGAPFAGHLPR 182.77 1.1424000000000001e-43 24769000.0 605.95 520.69 627.47 517.31 1041.9 878.01 504.74 726.04 612.06 605.54 840.44 True False 667.4655979231865 564.5703736617137 670.0538874836315 549.2630638037481 968.7205383598696 870.8597776632879 523.9481569043257 711.5585626326384 586.3372466959838 567.3061010578971 737.0712079881133 0.9055646058202163 0.7659644923626138 0.9090761926688057 0.7451967433417993 1.3142835154340908 1.1815137645117895 0.7108514770702797 0.9653864578089905 0.7954960665149732 0.7696761112218699 1.0 9.525660193693108 QSPPLSLEIYQT(ph)LSPR ddPTM_A549_MK2206_60min_R1 1 QSPPLSLEIYQTLSPR 16 0 A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2 A0A1X7SBY3 STIM2 Stromal interaction molecule 2 1 QSPPLS(0.041)LEIY(0.002)QT(0.478)LS(0.478)PR 46.3 0.031789 930940.0 407.59 249.71 515.44 379.94 620.71 468.98 694.65 618.34 604.81 450.98 447.82 True False 476.3812273812423 262.4191724023543 588.5371426131929 473.0253170561549 529.4043812495653 518.6071523162708 820.8589133047582 705.9915885868307 467.82150068310716 349.1033047807872 336.6139347967552 1.4152154089190558 0.7795849941886718 1.748403977893984 1.4052457969149845 1.5727345974824702 1.5406585964107566 2.438576744603239 2.097333222443993 1.3897864952191419 1.037102949976129 1.0 8.394951090881248 -9.573750753264894 1.454123355780993 1.0958737608338538 1.6077305853977644 0.23437171257267786 0.4016223337269795 0.41453254100690323 1.7825527667410903 0.10585986677897341 0.08140712765252506 2.668389645504618e-10 9.573750753264894 0.5118568245639106 QSPPLSLEIYQT(ph)LSPR ddPTM_A549_PD325901_60min_R1 2 QSPPLSLEIYQTLSPR 16 0 A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2 A0A1X7SBY3 STIM2 Stromal interaction molecule 2 1 QSPPLS(0.003)LEIYQT(0.643)LS(0.354)PR;QSPPLS(0.039)LEIY(0.002)QT(0.479)LS(0.479)PR 68.919 0.0019398 2716600.0 2409.3 2679.5 1915.42 2187.6800000000003 3228.7 2298.1 2176.8 2491.9700000000003 2967.4 2725.5 2520.2 True False 2653.8903623670817 2905.310868706069 2045.411919556151 2322.8080250182343 3001.92725041032 2279.3850355326254 2259.639315190667 2442.265703437353 2842.6904974114677 2553.4114648632603 2210.231376864073 1.2007296566988757 1.314482682273831 0.9254288672972457 1.0509343272078093 1.3581959254734333 1.0312879725590853 1.0223541927979933 1.104981916826507 1.2861506388732669 1.1552688517552852 1.0 11.109981689926578 -5.676955167943379 24.24059811665347 1.1199278346329788 1.2576075912002718 0.1790506947166447 0.12310273245889009 31.940084142836486 9159.606339693495 0.019005874222462128 0.0736094270921626 2.103995623236143e-06 5.676955167943379 0.13767975656729292 QSPS(ph)PSTR ddPTM_A549_PD325901_60min_R1 1 QSPSPSTR 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QS(0.379)PS(0.619)PS(0.002)TR 54.416000000000004 0.022997999999999998 4038700.0 459.45 579.46 423.62 495.88 625.42 429.83 431.47 404.35 500.3 507.69 502.04 True False 506.0930257707868 628.2931278150467 452.3694006340002 526.5093813748093 581.4926567818699 426.3296069896821 447.88982695944367 396.28492204356166 479.274130840115 475.6343667570824 440.29226269377017 1.1494479205117945 1.4269910717282668 1.0274298209701447 1.195817928195128 1.3206969689274477 0.9682877559131687 1.0172557296809863 0.9000497070264979 1.0885363460803246 1.080269646000782 1.0 8.782317681627529 -7.268893531890858 24.907770054973096 1.0243278994450866 1.2228549984213781 0.5053511769608195 0.10532842180917705 366.4638800968803 1224524.0213885405 0.01509467674616538 0.024419573220224932 5.384017565421316e-08 7.268893531890858 0.1985270989762915 QSPS(ph)PSTRPIR ddPTM_A549_MK2206_60min_R1 3 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QS(0.052)PS(0.854)PS(0.052)T(0.043)RPIR;QS(0.297)PS(0.394)PS(0.181)T(0.128)RPIR;QS(0.007)PS(0.865)PS(0.072)T(0.057)RPIR 60.448 0.0023175 19827800.0 3996.8900000000003 4705.7 3694.44 3750.7699999999995 4199.4 2613.2999999999997 2637.29 2917.9800000000005 4518.7 5574.7 5880.4 True False 4671.467317421462 4945.200030330216 4218.367144877937 4669.708818378465 3581.6738229115413 2889.837671431856 3116.4514553652994 3331.612600938966 3495.221664881132 4315.3713982027 4420.134389216293 1.0568609245950396 1.1187895197021416 0.9543526900832239 1.0564630862290192 0.8103088068203704 0.6537895495852187 0.7050580776386435 0.7537355898198547 0.7907500897276674 0.976298686467728 1.0 12.109874518466231 -6.756683273153523 24.994797529454594 0.8483607835525122 1.045181528170939 0.5094997825585365 0.10677451888488664 109.1811797201905 573773.3785190812 0.019001617170926317 0.038560745868726265 1.7511233006717587e-07 6.756683273153523 0.1968207446184267 QSPS(ph)PSTRPIR ddPTM_A549_PD325901_60min_R1 2 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 QS(0.036)PS(0.872)PS(0.046)T(0.046)RPIR;QS(0.312)PS(0.685)PS(0.002)T(0.001)RPIR 85.92399999999999 0.00032086 23522400.0 4421.0 4899.9 5369.200000000001 4598.5 5241.0 4552.9 4783.5 5607.1 5026.0 5763.1 5167.4 True False 4869.816665431815 5312.831769200545 5733.586199622475 4882.5389010487615 4872.890240468451 4515.822691909185 4965.53871013164 5495.261991815146 4814.774698385805 5399.2168824632 4531.8425588474765 1.07457763640189 1.1723337031707666 1.2651777119725496 1.077384935078255 1.0752558539252761 0.9964650433614433 1.0956997392677428 1.2125889018555585 1.0624320319747125 1.1913955112854386 1.0 12.145882025892124 -14.99999999643263 0.06743459563506607 0.5483703954413124 1.2787941923661188 0.0 0.09246722787417828 194.0508877568982 0.9818706153829281 13.609892690313446 1.9672434985211626 1.000000008214174e-15 14.99999999643263 0.7304237969248064 QSPSS(ph)SPTR ddPTM_A549_MK2206_60min_R1 1 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QS(0.032)PS(0.135)S(0.429)S(0.401)PT(0.003)R 62.303000000000004 0.007241199999999999 43589000.0 601.12 504.02 509.1 334.39 859.96 677.41 790.36 1011.8 1057.7 979.02 1243.3 True False 702.5743600270181 529.6724651565198 581.2980352793276 416.3155650113373 733.4610231821232 749.0930765716348 933.9581814144508 1155.2257485075445 818.1326387998254 757.8587020410799 934.5542966656376 0.7517747899011408 0.566764785145517 0.6220056312975284 0.44546963883927826 0.7848244085967099 0.8015511557159353 0.9993621395211454 1.236124805834431 0.8754254747089721 0.8109306273001115 1.0 9.868134675312476 -7.269991465775283 1.950994061280521 0.9681335882697907 0.6012558622412811 0.6378375257878905 0.12692146056629197 0.15560050107488682 1.1542263588746744 0.01887490340343928 0.0347257142152221 5.3704234956688024e-08 7.269991465775283 -0.36687772602850954 QSPSS(ph)SPTR ddPTM_A549_PD325901_60min_R1 2 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QS(0.053)PS(0.083)S(0.431)S(0.431)PT(0.002)R;QS(0.016)PS(0.158)S(0.787)S(0.039)PTR 85.53299999999999 0.0012657 72366000.0 1566.95 1605.99 1533.5900000000001 1527.0100000000002 1720.0 1405.3200000000002 1495.43 1293.38 1599.8000000000002 1795.65 1662.4 True False 1726.0256104723778 1741.3324135223959 1637.6686396258353 1621.3299396086693 1599.1931336778728 1393.8755398523606 1552.3394069806955 1267.5825212630186 1532.5659694543594 1682.272352552454 1457.9353388218549 1.1838835128773024 1.1943824716736422 1.123279336207888 1.1120725977592751 1.0968889299097222 0.9560612893701717 1.0647518896380739 0.8694367215814531 1.0511892596641583 1.1538730887145408 1.0 10.509711020493125 -6.62646651555322 1.1765223864129075 1.0110824532910632 1.1822233847006136 0.4680170931217279 0.06925691661779465 0.2441006072051065 0.6492297218195169 0.00835895750109109 0.027748748504462694 2.363379610559927e-07 6.62646651555322 0.17114093140955045 QSPSS(ph)SPTRER ddPTM_A549_PD325901_60min_R1 1 QSPSSSPTRER 11 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QSPS(0.026)S(0.579)S(0.376)PT(0.018)RER 60.196000000000005 0.0023545000000000003 49317000.0 3409.3 3303.7 3834.2 3223.3 4135.8 3686.4 3405.6 3671.2 3474.7 4313.4 3805.2 True False 3755.409626205993 3582.1143933361573 4094.411868917619 3422.3959203545664 3845.315675735433 3656.3791806220256 3535.2019716158256 3597.9750359993136 3328.670442594738 4041.0511878705506 3337.1845231502157 1.1253227384205244 1.073394164597987 1.2269060462538044 1.02553391837138 1.1522634271675078 1.095647889787796 1.0593366794949315 1.07814686632998 0.9974487234684162 1.2109163157858298 1.0 11.704415744413907 -8.298460697011285 0.9646536395794184 0.996637408183884 1.1202346431739687 0.0 0.0807313100724401 0.25532143575719785 0.46662684034063956 0.008965698170535365 0.01170358277359445 5.02966781518034e-09 8.298460697011285 0.12359723499008468 QSPSSS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QS(0.017)PS(0.027)S(0.222)S(0.685)PT(0.05)R 67.207 0.0050199 31015000.0 517.3 648.62 422.81 505.59 816.16 869.61 757.42 954.94 995.62 1239.4 857.47 True False 604.6075932292665 681.6319875199827 482.7708157463222 629.4595726967979 696.1039451606139 961.6315529996 895.033409796717 1090.3056693810981 770.1136596784368 959.4186791993162 644.5365340319189 0.9380501512414268 1.0575536862992265 0.7490200946815753 0.9766080578228722 1.0800069637730438 1.4919736930722656 1.3886465119328564 1.6916118975609593 1.194833215831795 1.4885404139896337 1.0 9.332118326442094 -6.853809396723469 3.6497770309553563 1.1963343372878807 0.9242901593704721 0.3488989040960161 0.22305135141667895 0.2918032093526532 7.555317304118928 0.0359909355891284 0.07175991210164051 1.400201708636239e-07 6.853809396723469 -0.27204417791740865 QSPSSS(ph)PTRER ddPTM_A549_MK2206_60min_R1 1 QSPSSSPTRER 11 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QS(0.055)PS(0.076)S(0.192)S(0.668)PT(0.009)RER 63.727 0.001835 40147000.0 1845.7 2209.6 2153.0 1976.1 3455.6 2842.7 2515.3 3114.2 4633.0 5552.0 4940.0 True False 2157.20903696744 2322.0592020353274 2458.3277744183697 2460.2445887104996 2947.2858176056393 3143.512627168458 2972.297451429434 3555.647386837512 3583.6328973807254 4297.799343968536 3713.2616629359354 0.5809472191253596 0.625342195841745 0.6620400062177851 0.6625562139257586 0.7937188609744599 0.8465637255099878 0.800454619478486 0.9575536844947782 0.9650903229230774 1.1574189308734113 1.0 11.858471266032785 -7.147369918266613 0.48727635874365155 0.9981825238756092 0.5551473778435442 0.8890216189812045 0.057935109124978235 0.15443229833782263 0.06419477428834891 0.0078066917259306985 0.029135498136331688 7.1224610303996e-08 7.147369918266613 -0.44303514603206506 down QSPSSS(ph)PTRER ddPTM_A549_PD325901_60min_R1 2 QSPSSSPTRER 11 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QSPS(0.01)S(0.188)S(0.801)PT(0.001)RER;QS(0.007)PS(0.255)S(0.255)S(0.347)PT(0.137)RER 70.009 0.00091066 43187300.0 3414.1699999999996 3642.2599999999998 3737.83 3889.6 4375.66 3706.8 3773.21 4274.320000000001 4491.95 4108.18 4586.68 True False 3760.7740250208863 3949.2060327125823 3991.501621197736 4129.851758077473 4068.3287368075144 3676.6130497856225 3916.801571329739 4189.065334460829 4303.168962676904 3848.7888136936162 4022.547437360098 0.9349234741378197 0.9817674233083382 0.9922820509525833 1.026675712937719 1.0113811708029132 0.9140011664345955 0.9737117168468354 1.0413961301125172 1.069762141947783 0.956803834790693 1.0 11.973893719219417 -8.259867670438982 24.70814851329566 1.0344976742439023 0.978089832097412 0.13951186716688857 0.04066637906568886 109.17563996096271 1716313.7337613543 0.006346805621113584 0.007976127739286635 5.497083445157289e-09 8.259867670438982 -0.056407842146490306 QSQQPMKPIS(ph)PVKDPVS(ph)PASQK ddPTM_A549_MK2206_60min_R1 4 QSQQPMKPISPVKDPVSPASQK 22 2 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 QS(0.001)QQPMKPIS(0.999)PVKDPVS(0.998)PAS(0.002)QK;QS(0.001)QQPMKPIS(0.999)PVKDPVS(0.983)PAS(0.017)QK;QS(0.173)QQPMKPIS(0.826)PVKDPVS(0.522)PAS(0.478)QK;QS(0.002)QQPMKPIS(0.998)PVKDPVS(0.904)PAS(0.096)QK 122.09 1.8695e-15 57648800.0 7205.0599999999995 8616.179999999998 8418.14 7882.6900000000005 11121.82 9098.77 9560.52 9349.039999999999 12931.630000000001 12590.800000000001 12212.07 True False 8421.097981195555 9054.706759319672 9611.95883462251 9813.949403867398 9485.815010985863 10061.595802125288 11297.542730624633 10674.295050234205 10002.636452569717 9746.529535309623 9179.475983014177 0.9173833012666589 0.9864078054209869 1.0471141111332067 1.0691186971922209 1.0333721694504718 1.0960969690147233 1.2307393964023385 1.1628436165622156 1.0896740152791649 1.0617740656813883 1.0 13.164196083368198 -5.436880720051479 1.3566122492855006 1.0704234485614696 0.8795421069532913 0.42233269176108645 0.06154210914452305 0.9518366205850141 1.917054280705506 0.0109315221611758 0.22635972439911362 3.6569521682878743e-06 5.436880720051479 -0.19088134160817838 QSQQPMKPIS(ph)PVKDPVS(ph)PASQK ddPTM_A549_PD325901_60min_R1 7 QSQQPMKPISPVKDPVSPASQK 22 2 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 QS(0.029)QQPMKPIS(0.971)PVKDPVS(0.993)PAS(0.007)QK;QS(0.014)QQPMKPIS(0.986)PVKDPVS(0.978)PAS(0.022)QK;QS(0.036)QQPMKPIS(0.964)PVKDPVS(0.998)PAS(0.002)QK;QS(0.005)QQPMKPIS(0.995)PVKDPVS(0.978)PAS(0.022)QK;QS(0.033)QQPMKPIS(0.967)PVKDPVS(0.998)PAS(0.002)QK;QS(0.002)QQPMKPIS(0.997)PVKDPVS(0.898)PAS(0.102)QK;QS(0.173)QQPMKPIS(0.827)PVKDPVS(0.979)PAS(0.021)QK 118.68 1.4977e-15 198688800.0 15241.26 15159.9 16679.949999999997 13915.03 18532.16 15508.119999999999 16253.789999999999 18411.5 17507.1 18794.3 18804.7 True False 16788.5414951774 16437.47797667368 17811.951711687572 14774.52979977396 17230.525014081235 15381.827012420801 16872.33687286516 18044.268188957678 16771.337469580216 17607.6246905447 16491.841112814807 1.0179907373793484 0.9967036344960366 1.080046284089348 0.8958690360103925 1.0447908693888908 0.9326931363938814 1.0230717575707597 1.0941330361797248 1.0169475533297632 1.06765670188654 1.0 14.009464846612152 QSQQPMKPIS(ph)PVKDPVSPASQK ddPTM_A549_MK2206_60min_R1 5 QSQQPMKPISPVKDPVSPASQK 22 2 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QS(0.001)QQPMKPIS(0.99)PVKDPVS(0.009)PAS(0.001)QK;QS(0.019)QQPMKPIS(0.98)PVKDPVSPASQK;QS(0.296)QQPMKPIS(0.704)PVKDPVSPASQK;QS(0.086)QQPMKPIS(0.909)PVKDPVS(0.005)PASQK;QS(0.025)QQPMKPIS(0.967)PVKDPVS(0.007)PASQK 82.089 1.6258e-05 131468200.0 10364.300000000001 11808.5 11893.2 10329.5 14300.9 11900.300000000001 11566.0 11156.2 16748.4 15873.1 16238.0 True False 12113.540457193283 12409.502211818513 13579.834596708117 12860.22796370888 12197.256554287671 13159.581847220188 13667.392487271049 12737.625514429596 12954.914141698977 12287.355685653274 12205.65645399873 0.9924530075745931 1.0167009253937342 1.1125853531834569 1.0536285378977468 0.999311802708628 1.0781543702148801 1.119758903487197 1.0435838139829494 1.0613861032812193 1.006693554907305 1.0 13.575262268888938 -10.684093079041002 0.9208069730867507 0.9996468865039998 1.0547175733343037 0.19216837084114746 0.03901993128652902 0.7575681326847172 1.1306783522684114 0.027788461075637986 0.007131974001596272 2.0696977186450452e-11 10.684093079041002 0.05507068683030392 QSQQPMKPIS(ph)PVKDPVSPASQK ddPTM_A549_PD325901_60min_R1 6 QSQQPMKPISPVKDPVSPASQK 22 2 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QS(0.001)QQPMKPIS(0.998)PVKDPVS(0.001)PASQK;QSQQPMKPIS(0.998)PVKDPVS(0.001)PASQK;QSQQPMKPIS(1)PVKDPVSPASQK;QS(0.001)QQPMKPIS(0.999)PVKDPVSPASQK;QSQQPMKPIS(1)PVKDPVSPASQK;QSQQPMKPIS(1)PVKDPVSPASQK 147.25 1.077e-27 187669000.0 23516.6 22752.5 23838.1 20684.399999999998 27330.6 23155.8 24526.6 24678.3 25791.299999999996 25970.199999999997 26824.8 True False 25903.98791999407 24669.933024905706 25455.89681614029 21962.028410319224 25410.992941451455 22967.226842081014 25459.973184470513 24186.07194674817 24707.381352661716 24330.43713989794 23525.519656417524 1.1011016248870713 1.0486456148557806 1.0820546023176232 0.9335406286903509 1.0801458719114667 0.9762686298755482 1.0822278766337596 1.0280781168695865 1.0502374320952266 1.0342146526510771 1.0 14.521938970620427 QSQQPMKPISPVKDPVS(ph)PASQK ddPTM_A549_PD325901_60min_R1 1 QSQQPMKPISPVKDPVSPASQK 22 2 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QS(0.001)QQPMKPIS(0.084)PVKDPVS(0.899)PAS(0.016)QK 47.507 0.0052999 10738000.0 1797.0 1858.0 2472.0 1947.8 2793.4 2321.0 2360.0 2375.7 2756.2 2370.4 2350.7 True False 1979.4301171185189 2014.5801806515676 2639.7647853435815 2068.1111822252415 2597.2012207068456 2302.098545525097 2449.8110914415533 2328.3147997994024 2640.3664989436847 2220.7325394650056 2061.578802315046 0.9601525369273888 0.9772026072393153 1.2804578618965536 1.0031686297428264 1.2598117606711534 1.1166677417035722 1.1883179477255699 1.1293843326215938 1.2807497321852022 1.0771999289919156 1.0 11.00953389288602 -5.647659994151012 9.41552952340343 1.144685853676675 0.9648599338248515 0.34871043925695844 0.09471804694721091 0.26504207428177684 20.64737354893244 0.01519249724375563 0.05904382395372679 2.250816063018299e-06 5.647659994151012 -0.1798259198518236 QSS(ph)EEEEKETR ddPTM_A549_MK2206_60min_R1 1 QSSEEEEKETR 11 1 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 QS(0.159)S(0.841)EEEEKETR 107.35 3.9129e-05 9058100.0 2691.5 2581.4 2253.0 1905.6 470.88 172.07 222.71 317.94 634.07 3824.0 3976.6 True False 3145.7593991428002 2712.782233949131 2572.509278107101 2372.472085545635 401.61417577096404 190.2783331891781 263.173524195066 363.0089686504138 490.45415740172587 2960.1557441166565 2989.100471423289 1.052410057546482 0.9075580629972647 0.8606299128119224 0.7937077084652023 0.13435954381945936 0.0636573895753244 0.08804438884242435 0.12144421779090069 0.16408085378548395 0.9903165759788428 1.0 11.545495675217083 -10.977279936943 1.2922028969164996 0.9951957653817727 0.42757157696067183 0.23569869888717387 0.36203320785577786 0.5720934774971631 1.7223134558855704 0.27845096197165015 0.06649240697055425 1.0537074801201851e-11 10.977279936943 -0.5676241884211009 QSS(ph)EEEEKETR ddPTM_A549_PD325901_60min_R1 2 QSSEEEEKETR 11 1 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 QS(0.022)S(0.978)EEEEKETR;QS(0.136)S(0.864)EEEEKETR 112.15 1.451e-05 40871000.0 3414.2 3883.9 3888.0 3338.3 4538.1 3224.3 3733.4 3859.3 3992.6000000000004 4086.6000000000004 4116.2 True False 3760.8070705988025 4211.2098835482375 4151.863060443301 3544.4992091706163 4219.359511595094 3198.042369813257 3875.4765799948673 3782.323233937718 3824.804906640502 3828.5713785764833 3609.933494741648 1.0417940042598908 1.1665616249391932 1.150121758888646 0.9818738251919751 1.168819181223465 0.8859006334802663 1.0735589964856744 1.0477542701125047 1.0595222632804298 1.0605656265283865 1.0 11.817756543466993 -6.252696245720734 24.889260649892982 1.0307349023106909 1.1241993821018164 0.21505743090087648 0.0716529505280055 597.9324820125528 1702141.506893632 0.00902023685174995 0.02348555555937743 5.588609366329607e-07 6.252696245720734 0.09346447979112549 QSS(ph)GASSSSFSSSR ddPTM_A549_MK2206_60min_R1 2 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QS(0.033)S(0.967)GASSSSFSSSR;QS(0.03)S(0.97)GASSSSFSSSR 141.0 6.6205e-13 13526300.0 2208.31 3008.9 2192.5 1538.94 2238.3999999999996 2099.0 1713.8600000000001 1861.76 2322.7 2940.6 2964.2 True False 2581.0187400041013 3162.040157948993 2503.429468375419 1915.9803690856415 1909.1343251905494 2321.114786796565 2025.2461774368267 2125.670181400876 1796.6121585897283 2276.316417664604 2228.107332241842 1.1583906675658988 1.4191597111111613 1.123567716936041 0.8599138566443523 0.8568412740106405 1.041742807094101 0.908953598478174 0.9540250375919291 0.8063400414297104 1.021636787745883 1.0 11.121603016425901 -6.04525905149911 4.098155192684338 0.9139752414827436 1.2890330800667995 0.703552984320735 0.09054739856122147 0.0796125331971371 2.831669700627148 0.012963312293974225 0.03866421069818096 9.010335214896426e-07 6.04525905149911 0.37505783858405595 QSS(ph)GASSSSFSSSR ddPTM_A549_PD325901_60min_R1 2 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QS(0.111)S(0.889)GASSSSFSSSR;QS(0.001)S(0.999)GASSSSFSSSR 137.79 2.6541999999999998e-09 22376000.0 4355.5 4830.7 4448.8 3243.3999999999996 5908.2 3993.2 4591.1 4690.6 4686.9 4852.5 5364.1 True False 4797.667153650367 5237.800042343124 4750.722320807659 3443.7374517041535 5493.228414183495 3960.6807031412422 4765.816822846317 4597.042303295487 4489.925892133789 4546.112321867167 4704.349705831515 1.0198364181351518 1.113395127885655 1.0098573911116049 0.7320326223697389 1.1676913405000664 0.8419188518726786 1.0130660178044604 0.977189747946882 0.9544200947833604 0.966363600952498 1.0 12.199779594010748 -5.995230746827265 24.69521161028554 0.9675347173790548 1.0653684464646742 0.13945694237965078 0.10404398645127956 163.50036001733682 846574.1336644894 0.01256719442242818 0.0388644726667289 1.0110421304831686e-06 5.995230746827265 0.09783372908561938 QSS(ph)GSATNVASTPDNR ddPTM_A549_MK2206_60min_R1 1 QSSGSATNVASTPDNR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QS(0.126)S(0.633)GS(0.24)ATNVASTPDNR 105.28 8.998100000000001e-07 2990300.0 366.13 539.41 473.15 403.54 330.17 347.83 436.85 392.65 574.57 621.0 689.04 True False 427.92379298092254 566.8636649936082 540.2497847032286 502.4073181155992 281.60243037355417 384.6371397291323 516.2199903220089 448.3093399401929 444.43081239975055 480.7156686967692 517.932351463437 0.8262156086056567 1.09447433316709 1.0430894752504507 0.970024978544068 0.5437050409727758 0.7426397262930686 0.9966938517422405 0.8655750865407003 0.8580866036732303 0.9281437379582281 1.0 9.01661986571436 -10.799378762017259 0.9807875886695719 1.0018918693209713 0.883259669133336 0.036870781773043815 0.14596785159992692 1.352899644761021 2.2497001875872673 0.11467365096812725 0.02687108493758534 1.587161930462403e-11 10.799378762017259 -0.11863220018763532 QSS(ph)LSEK ddPTM_A549_MK2206_60min_R1 1 QSSLSEK 7 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 QS(0.028)S(0.847)LS(0.125)EK 80.896 0.015661 86429000.0 13422.0 12810.0 10495.0 8025.1 13637.0 12323.0 11054.0 12795.0 11420.0 17334.0 17191.0 True False 15687.305463605662 13461.974284066138 11983.348812132273 9991.249860260434 11631.015364824672 13627.011680654628 13062.36871470639 14608.730433044111 8833.388233992637 13418.237361014153 12922.00025253678 1.2139997799896354 1.0417871862696608 0.9273602056910473 0.7731968476241906 0.9000940363347641 1.0545590012644865 1.0108627503038512 1.1305316628651358 0.6835929470175108 1.0384024995185985 1.0 13.657541787898205 -8.753648631932379 24.999807479525522 0.8505855557107528 0.9955011285080009 0.046862875663579384 0.14157956991059484 251.25491414542577 806253.8811712001 0.02697283740192389 0.03030677118466795 1.7634021585447073e-09 8.753648631932379 0.1449155727972481 QSS(ph)PSGSEQLVR ddPTM_A549_MK2206_60min_R1 2 QSSPSGSEQLVR 12 0 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 QS(0.003)S(0.986)PS(0.012)GSEQLVR;QS(0.023)S(0.958)PS(0.015)GS(0.005)EQLVR 108.72 0.00010995 79517000.0 1594.12 1833.9099999999999 1653.31 1332.06 2376.06 1995.19 1805.56 2240.0 2487.6000000000004 2157.8 2339.8 True False 1863.1684835079018 1927.2481857370599 1887.7742186361515 1658.414759798446 2026.5447215476481 2206.3196815000656 2133.6068804528013 2557.5268597122963 1924.1625718809184 1670.3514813428158 1758.763084805164 1.0593629691257158 1.09579749676777 1.0733533327743683 0.9429438075692642 1.152255661411127 1.254472362174057 1.2131292150068993 1.4541622358395243 1.094043074081281 0.9497308055722908 1.0 10.78034544149322 -4.3535702897115645 16.44019954294379 1.097285882532046 1.0827748271280682 0.0 0.14320736407537135 0.0 0.0 0.019524689270728954 0.0 4.4302650571397166e-05 4.3535702897115645 -0.01451105540397779 QSS(ph)PSGSEQLVR ddPTM_A549_PD325901_60min_R1 2 QSSPSGSEQLVR 12 0 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 QS(0.005)S(0.994)PS(0.001)GSEQLVR;QS(0.098)S(0.898)PS(0.003)GSEQLVR 152.0 1.8527e-12 84148000.0 3365.6 3366.3 2696.4 3067.3 3955.2 2760.8 3107.8999999999996 3416.4 3911.0 3710.2 3169.6 True False 3707.273234376229 3649.989915030876 2879.393918770401 3256.760154656272 3677.4003966992605 2738.3169601403238 3226.172835208134 3348.2572218860464 3746.634270868861 3475.937338813308 2779.75929374985 1.3336669986900838 1.3130597038519474 1.035842896629422 1.1715979012927251 1.3229204431361061 0.985091394890663 1.160594315652446 1.2045133653890234 1.3478268709427401 1.2504454420311788 1.0 11.440744246478399 -11.066873013185745 1.3955793315673255 1.0005766319510088 1.2186114332696252 0.0 0.135177340498896 0.42319548212188357 1.4773423145324265 0.08536070230624712 0.019105813001703477 8.572884779760036e-12 11.066873013185745 0.2180348013186164 QSS(ph)PSPSR ddPTM_A549_PD325901_60min_R1 1 QSSPSPSR 8 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 QS(0.239)S(0.599)PS(0.15)PS(0.012)R 48.698 0.034927 5716700.0 1131.5 1013.8 1046.4 853.7 1091.0 791.41 759.27 937.65 1108.1 934.59 1206.3 True False 1246.3690470337253 1099.2364839314098 1117.41499651437 906.4311101066277 1014.3719237456739 784.9650193511495 788.1644353384863 918.9478351778049 1061.53041052155 875.579827901873 1057.9327473657384 1.1781174655356828 1.0390419302819751 1.0562249814997626 0.8567946425362566 0.9588245814977074 0.7419800751094238 0.7450042900184558 0.8686259476001598 1.0034006539307625 0.827632786755183 1.0 10.04703220311043 -5.535638333090003 1.4817997311248716 0.9457089534758415 1.1949908866099823 0.34681854578170823 0.10607628806754107 0.7738669451642407 2.21298720630635 0.017143962790081468 0.24223605416640587 2.9131420821488572e-06 5.535638333090003 0.24928193313414082 QSS(ph)QDNELK ddPTM_A549_MK2206_60min_R1 2 QSSQDNELK 9 0 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 QS(0.003)S(0.997)QDNELK;QS(0.04)S(0.96)QDNELK 111.94 0.00029969 15390700.0 6104.700000000001 6055.2 6407.2 5225.1 7051.4 5162.1 5618.9 5565.6 8483.5 8249.8 7621.799999999999 True False 7135.024114414655 6363.383816149672 7315.837304344347 6505.249734563655 6014.148400933098 5708.349995675348 6639.781397780328 6354.540843935153 6562.000795365719 6386.164450265066 5729.096709021277 1.2454012345749976 1.1107132833225908 1.2769617403777669 1.135475636904543 1.049755084682541 0.9963787112699178 1.1589578139473624 1.1091697638702844 1.1453813975653293 1.1146895880129135 1.0 12.484091975800641 -14.999999999694671 0.021147948477759117 8.18721363973124e-10 1.913245731622033 0.23516506394049652 0.07343772915299827 1768.3718434493592 2.9035509175640404 178.6045555201509 96.05758433095684 1.0000000007030461e-15 14.999999999694671 1.9132457308033117 QSS(ph)QDNELK ddPTM_A549_PD325901_60min_R1 2 QSSQDNELK 9 0 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 QS(0.196)S(0.804)QDNELK;QS(0.051)S(0.949)QDNELK 92.24700000000001 0.0010103999999999998 9117500.0 8292.0 8522.3 7583.8 7399.0 9972.8 7551.3 8498.5 7313.1 7916.9 8585.4 10016.0 True False 9133.797735752232 9240.50413001445 8098.482273094112 7856.0194256518 9272.344932292259 7489.804716425532 8821.915068057637 7167.234483484031 7584.180224761355 8043.316378806467 8784.09549665525 1.0398108421328227 1.0519585236218103 0.9219483413150277 0.8943458582210498 1.0555833478612477 0.8526552015830714 1.004305459955073 0.8159331243852168 0.8633991089519927 0.9156681392943812 1.0 13.100678023408893 -7.259775425844436 24.999912883263928 0.9245854987755018 0.9866218559871036 0.23434260656863315 0.07223470774419635 257.921746272881 3875112.9074973757 0.011979036257111685 0.020057244170314518 5.4982511553407934e-08 7.259775425844436 0.062036357211601834 QSS(ph)SEQCSDGEGR ddPTM_A549_MK2206_60min_R1 2 QSSSEQCSDGEGR 13 0 A0A3B3IRT3;O60343-2;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 QS(0.003)S(0.772)S(0.226)EQCSDGEGR;QS(0.057)S(0.941)S(0.002)EQCSDGEGR 200.44 1.5555000000000001e-30 18088800.0 2874.0 3535.3 2795.3999999999996 2533.8 1616.19 1052.71 664.8 790.64 920.3 3183.1000000000004 3063.2 True False 3359.0609374461847 3715.2316695128075 3191.829754114777 3154.5811137466058 1378.4505919539472 1164.1070734676573 785.5855546894159 902.7156412334501 711.8535194171121 2464.0354992410385 2302.522899980841 1.4588610334664358 1.613548195131402 1.386231491613541 1.3700541756926086 0.5986696557786318 0.5055789340802402 0.3411846868910414 0.3920550111536183 0.30916240590833444 1.0701459252637797 1.0 11.168999789523543 -6.727670254515087 4.528918710214899 0.6007319892220522 1.4787289112485333 0.7523239540403999 0.2363810974733724 0.09139326330105765 4.24530668097316 0.04117662500421003 0.08571397826505395 1.8721030270015688e-07 6.727670254515087 0.8779969220264812 QSS(ph)SEQCSDGEGR ddPTM_A549_PD325901_60min_R1 2 QSSSEQCSDGEGR 13 0 A0A3B3IRT3;O60343-2;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 QS(0.001)S(0.941)S(0.058)EQCSDGEGR;QS(0.005)S(0.77)S(0.225)EQCSDGEGR 260.73 9.000699999999999e-70 21087700.0 3322.5 3824.3999999999996 4484.8 2989.4 3921.8999999999996 2696.9 3559.8 3735.5 2239.8 3497.9 3860.3999999999996 True False 3659.797754104776 4146.695609732968 4789.16549729324 3174.048448580006 3646.439273820496 2674.9373405543447 3695.2701369973065 3660.992522056938 2145.6689951143107 3277.0419970446505 3385.5952730918452 1.0809909215056646 1.224805470012976 1.414571179064651 0.9375156191310939 1.0770452401094117 0.7900936540803642 1.0914683649184846 1.0813438189596687 0.6337641749939029 0.9679367238872413 1.0 11.725193802962806 -6.878726841901293 0.8732943722598816 0.8525556794321002 1.235880993144543 0.28656759321694525 0.16599624878761252 0.5015700842951524 0.7194901126422067 0.03222303073770489 0.10691950820622237 1.3221269506016157e-07 6.878726841901293 0.3833253137124427 QSS(ph)TPSAPELGQQPDVNISEWK ddPTM_A549_MK2206_60min_R1 1 QSSTPSAPELGQQPDVNISEWK 22 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 QS(0.14)S(0.681)T(0.14)PS(0.039)APELGQQPDVNISEWK 105.84 1.6317e-10 5589400.0 949.15 770.93 823.82 841.04 1404.7 1370.7 844.26 837.32 1767.1 1283.1 1676.5 True False 1109.3433155104549 810.1670440917337 940.6500636885007 1047.0948377557202 1198.0704907948375 1515.7465642029786 997.6511137215497 956.012674184955 1366.8546714788426 993.2468188483489 1260.1787809538653 0.8803062964373685 0.6428984968930322 0.7464417572374102 0.8309097515220374 0.9507146992968599 1.2028027983899767 0.7916742678101587 0.7586325754995825 1.0846513940222287 0.7881792915895093 1.0 10.299412707354529 -6.690755575060094 2.7170092809526185 1.0088755989218328 0.7494038391140333 0.15043703337465297 0.1451817566396283 0.1988864705186013 2.977883900090268 0.019547967853215605 0.0436861619086016 2.0381888664560284e-07 6.690755575060094 -0.25947175980779946 QSS(ph)TPSAPELGQQPDVNISEWK ddPTM_A549_PD325901_60min_R1 1 QSSTPSAPELGQQPDVNISEWK 22 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 QS(0.166)S(0.601)T(0.166)PS(0.067)APELGQQPDVNISEWK 117.57 1.6483e-15 11282000.0 1966.3 2182.6 1524.4 1664.8 1715.2 1953.3 1744.0 1639.1 2354.9 1879.8 2595.6 True False 2165.9173284864455 2366.5353618353674 1627.8549509618756 1767.630914964876 1594.7302691187726 1937.3929724145512 1810.368874353419 1606.4068646509247 2255.931742385342 1761.1091071913254 2276.3576548640553 0.9514837546983779 1.0396149114699191 0.7151138782974292 0.776517218719059 0.700562262573809 0.8510933983835035 0.7952919307232214 0.7056917708947893 0.9910269318026244 0.7736521997886572 1.0 11.152511532272047 -8.792271636530495 21.42008941452616 0.9957630957198699 0.8161434938222238 0.044917616699401974 0.11932469563339505 30.8625297570317 21440.750456068585 0.01772711920597712 0.018874440625164267 1.6133491457819752e-09 8.792271636530495 -0.17961960189764603 QSS(ph)VSSTASVNLGDPGSTR ddPTM_A549_MK2206_60min_R1 1 QSSVSSTASVNLGDPGSTR 19 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 QS(0.18)S(0.815)VS(0.005)STASVNLGDPGSTR 158.58 1.4981e-26 7916300.0 1415.6 1930.9 1672.9 1404.5 2385.9 1539.3 1485.0 1775.3 2632.5 2486.8 2355.9 True False 1654.5186719028598 2029.1745624592766 1910.1423752087744 1748.6025630503998 2034.9372705826195 1702.1877042953552 1754.805277848651 2026.9542116282312 2036.2429532386693 1925.0301528423915 1770.865010467769 0.9342997134862489 1.1458663141823981 1.0786493402476882 0.9874284898703325 1.149120491146356 0.961218214959099 0.9909311367471901 1.1446124914359321 1.149857804633455 1.087056405464751 1.0 10.790238527157793 -8.244982271297149 24.716415048586157 1.078281953218698 1.040954773763919 0.11000889366458144 0.07565212492995575 2135.5358787055093 3207296.059728092 0.013473496455840159 0.017370020909635946 5.6887615294507646e-09 8.244982271297149 -0.037327179454778925 QSS(ph)VSSTASVNLGDPGSTR ddPTM_A549_PD325901_60min_R1 2 QSSVSSTASVNLGDPGSTR 19 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 QS(0.004)S(0.865)VS(0.13)S(0.001)TASVNLGDPGSTR;QS(0.005)S(0.979)VS(0.015)STASVNLGDPGSTR 246.95 6.090299999999999e-86 24636000.0 6703.0 7721.3 7327.0 6899.1 10784.9 7099.0 7586.3 7868.4 7939.8 8892.1 9555.099999999999 True False 7383.483625512208 8372.001048904705 7824.254280830271 7325.24173800707 10027.405829885176 7041.188097665946 7875.00079788265 7711.458589359614 7606.117817398258 8330.651288464725 8379.88327476943 0.8810962376698931 0.9990593871529861 0.9336949005468758 0.8741460349528104 1.1966044753959986 0.8402489470069238 0.939750655190281 0.9202346066773576 0.907663933732721 0.9941249794668459 1.0 13.032714433111282 -7.7769953343122875 0.0038022565855390976 1.8969141818837354 6.499835677941323e-08 0.019354792999252912 0.09112379147568436 58080.21238607552 106.35904660032777 26334.51635121367 26723.84919448929 1.6711085671725368e-08 7.7769953343122875 -1.8969141168853787 QSSFEPEFVIS(ph)PR ddPTM_A549_MK2206_60min_R1 1 QSSFEPEFVISPR 13 0 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 1 QSSFEPEFVIS(1)PR 63.894 0.006267 1715100.0 1119.9 1218.9 712.08 912.38 1529.5 1459.2 1072.5 1263.7 1809.8 1494.3 1371.3 True False 1308.9117410737585 1280.9368036571598 813.063651466713 1135.9131409582942 1304.5125761163988 1613.611575461433 1267.3593673351374 1442.8333449189406 1399.883189656732 1156.7365921635785 1030.7683640453536 1.2698408165504842 1.2427009290719742 0.7887937579649451 1.102006212627917 1.2655729663614323 1.5654453820532994 1.2295287782807562 1.3997648698262302 1.358096773714271 1.12220808526161 1.0 10.009504448998573 -5.53765524318658 24.99579730075692 1.1950466559307094 1.2630564023053779 0.00978570303740911 0.1974716795327514 1059.5825208655212 1792382.910889471 0.030515673633775973 0.11827707684577515 2.8996445046142304e-06 5.53765524318658 0.0680097463746685 QSSFEPEFVIS(ph)PRPK ddPTM_A549_MK2206_60min_R1 2 QSSFEPEFVISPRPK 15 1 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 1 QSSFEPEFVIS(1)PRPK;QSSFEPEFVIS(1)PRPK 127.5 9.648999999999998e-10 30480000.0 4090.7 4347.3 3898.5 3389.8999999999996 5554.0 4579.5 3650.2999999999997 4256.2 6786.200000000001 5992.7 5991.6 True False 4781.1101519871645 4568.559001180389 4451.365921305161 4220.425652178394 4737.013957339313 5064.099650373922 4313.512259751469 4859.529384065836 5249.136535334574 4638.944907889095 4503.720360252423 1.0615912555723583 1.0143966844611843 0.9883752909240732 0.9370976247605765 1.0518001959326386 1.124425862464092 0.957766449671335 1.0790033561927168 1.1655112030624324 1.03002507634135 1.0 12.136901536724633 -6.984420501452388 24.365228973740233 1.0735156925802698 0.9997532453336428 0.15697501016053272 0.060206135481275326 241.79131178412146 378141.61417014385 0.010594487138469099 0.020016353328322276 1.0365243250937585e-07 6.984420501452388 -0.07376244724662695 QSSFEPEFVIS(ph)PRPK ddPTM_A549_PD325901_60min_R1 4 QSSFEPEFVISPRPK 15 1 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 1 QSSFEPEFVIS(1)PRPK;QSSFEPEFVIS(1)PRPK;QS(0.002)S(0.002)FEPEFVIS(0.996)PRPK;QSSFEPEFVIS(1)PRPK 141.86 5.1322e-14 44808200.0 7978.5 8833.4 9251.6 8089.9 10229.9 8959.0 9168.1 9460.7 9038.8 10096.4 10375.4 True False 8788.471446538737 9577.821618819993 9879.469210390238 8589.59474950405 9511.387115239118 8886.040874346989 9516.997062476823 9271.99891672443 8658.930669273703 9458.9115809376 9099.291575079558 0.965841282700285 1.0525898131510585 1.0857404808795632 0.9439849991210933 1.045288749872372 0.9765640325982515 1.0459052755866451 1.0189803063480094 0.9516049241666371 1.03952175868756 1.0 13.151538513390562 -8.736016754184288 23.998304365728483 0.9771467724090201 1.018491959461343 0.0 0.04502671105750541 181.37911908807956 171216.7186291288 0.006813344876575884 0.007723878310758555 1.8364674948581403e-09 8.736016754184288 0.04134518705232293 QSSFILT(ph)PPR ddPTM_A549_PD325901_60min_R1 1 QSSFILTPPR 10 0 Q8N0S6-3;Q8N0S6;Q8N0S6-2 Q8N0S6-3 CENPL Centromere protein L 1 QS(0.001)S(0.001)FILT(0.998)PPR 50.46 0.028749 3174700.0 2394.4 2736.6 2482.2 2080.6 2837.1 2178.0 2166.8 2659.4 2823.9 2720.4 2632.2 True False 2637.4777253358816 2967.222886098534 2650.657018681163 2209.1139366145594 2637.831883463661 2160.2630901135985 2249.2587597184556 2606.356180741059 2705.221303376776 2548.633479733633 2308.456086890571 1.1425288704055419 1.2853711634148106 1.1482380079629446 0.9569659778931195 1.1426822881507572 0.9358042816501723 0.9743563122087141 1.1290473297465888 1.1718747082690395 1.104042435204637 1.0 11.1727125733293 -6.003910801114335 24.41884895243505 1.0654725414616286 1.2146637030669434 0.37374962783400734 0.08212600539658764 112.13628707754435 700200.3216941769 0.012566167487625488 0.03780399619474065 9.91035470808662e-07 6.003910801114335 0.14919116160531476 QSSFILT(ph)PPRR ddPTM_A549_MK2206_60min_R1 2 QSSFILTPPRR 11 1 Q8N0S6-3;Q8N0S6;Q8N0S6-2 Q8N0S6-3 CENPL Centromere protein L 1 QSSFILT(1)PPRR;QSSFILT(1)PPRR 74.678 0.00085654 5295600.0 874.6700000000001 950.1700000000001 931.26 908.03 1331.87 1042.9099999999999 860.9000000000001 766.65 1468.6599999999999 1340.1100000000001 1337.82 True False 1022.2929123716274 998.5295944957949 1063.3266712516731 1130.4973907630156 1135.95368731752 1153.27004397237 1017.3143863299017 875.3249852671563 1136.0108549680936 1037.3782202531834 1005.6023720463468 1.0165975546490769 0.9929666260271849 1.0574027078793187 1.1241992085425516 1.1296251071941241 1.1468449916496593 1.0116467647741538 0.8704484094303766 1.1296819563545504 1.0315988198617456 1.0 9.973844242611372 -11.257867173044758 1.761164923787696 0.9998479691574953 1.0651267256342323 0.010221226744569822 0.07845562164693809 0.8480049665691083 4.738389119755221 0.06260489588154577 0.012620139526155262 5.5224631543151275e-12 11.257867173044758 0.06527875647673698 QSSFILT(ph)PPRR ddPTM_A549_PD325901_60min_R1 2 QSSFILTPPRR 11 1 Q8N0S6-3;Q8N0S6;Q8N0S6-2 Q8N0S6-3 CENPL Centromere protein L 1 QSSFILT(1)PPRR;QSSFILT(1)PPRR 75.669 0.00080211 12310200.0 1051.15 1221.63 1254.88 1284.59 1371.46 1217.4099999999999 1071.54 1285.6399999999999 1453.62 1043.05 1234.3899999999999 True False 1157.8619741842695 1324.5810474108587 1340.0437030064531 1363.9362067844354 1275.133380880149 1207.495816590999 1112.3180410691868 1259.9969016349303 1392.5294064997174 977.1916449919734 1082.5678554429196 1.069551408129095 1.2235547552526602 1.2378380683196901 1.2599082818936993 1.177878480752085 1.1153996588019572 1.0274811278357192 1.163896466443129 1.2863206675668204 0.9026608725530347 1.0 10.080241740692987 -7.079616676350698 5.058282820405866 1.1307683411289107 1.2042547128868173 0.13417599705084415 0.1079271941973573 0.46800421089704114 21.131700764004606 0.016951613313372846 0.03000255547546192 8.324982392715962e-08 7.079616676350698 0.07348637175790662 QSSGAS(ph)SSSFSSSR ddPTM_A549_MK2206_60min_R1 2 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QS(0.001)S(0.003)GAS(0.467)S(0.467)S(0.061)S(0.001)FSSSR;QSS(0.003)GAS(0.971)S(0.019)S(0.006)S(0.001)FSSSR 147.14 3.4944e-13 23610000.0 6956.4 7084.6 6362.299999999999 6383.700000000001 8367.3 6319.1 6349.9 6635.5 10426.9 10087.2 10693.400000000001 True False 8130.470252348862 7445.1758792267765 7264.569809188104 7947.706786575181 7136.481254095289 6987.782967720901 7503.594635563066 7576.102445366491 8065.223798337809 7808.494514135341 8037.933657173912 1.0115124855618036 0.9262549551627494 0.9037857388514802 0.9887748674663166 0.8878502309764561 0.8693506647052573 0.9335228375349994 0.9425435402299902 1.0033951687495628 0.9714554569837989 1.0 12.972608954511944 -8.695810148652134 3.8777370505260826 1.0018083347519986 0.9289888895439824 0.29501259879092434 0.03960965173313257 0.15622042397785624 4.679001228505756 0.006562585909460251 0.007338845534943062 2.0146047396083875e-09 8.695810148652134 -0.0728194452080162 QSSGAS(ph)SSSFSSSR ddPTM_A549_PD325901_60min_R1 2 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QSS(0.006)GAS(0.855)S(0.102)S(0.035)S(0.001)FSSSR;QS(0.001)S(0.005)GAS(0.919)S(0.064)S(0.011)SFSSSR 145.36 4.4018e-13 31732000.0 8343.099999999999 8994.1 9208.6 8092.7 10097.1 8455.5 8273.3 10035.9 9129.2 10687.8 9946.1 True False 9190.085370134402 9752.064371796692 9833.550971810244 8592.56769914479 9387.914529103982 8386.641211412094 8588.144958823472 9835.72610148875 8745.53147164817 10012.970484008638 8722.792753522644 1.0535714455009888 1.1179979448506767 1.1273397465323278 0.9850707155314148 1.0762510120755457 0.961462853513882 0.9845636829277188 1.1275891081462017 1.0026068162763975 1.1479087910193628 1.0 13.090574397485032 -6.2615140608646245 24.999999962910906 1.0107428829083274 1.1014725378171386 0.08224206766429998 0.06320967828579797 4.812479774374175 1611501.1937365062 0.0064415617554914 0.01596232234174679 5.476283704740455e-07 6.2615140608646245 0.09072965490881124 QSSGASSSS(ph)FSSSR ddPTM_A549_MK2206_60min_R1 2 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QSSGASSS(0.029)S(0.971)FSSSR;QSSGASSS(0.003)S(0.997)FSSSR 218.63 7.3837e-39 59078000.0 2800.7 4033.4 3492.3 2836.6000000000004 4694.3 3649.6 3369.8 3755.6 5479.3 5421.6 5741.2 True False 3273.3896894591276 4238.682831955689 3987.560653321539 3531.567127339814 4003.7746885016063 4035.798249591586 3982.049040602278 4287.967801042632 4238.247298644121 4196.856794535271 4315.501590940849 0.7585189393350392 0.9821993440701263 0.9240086162156149 0.8183445314336856 0.9277657774258214 0.9351863658360318 0.9227314500269079 0.9936197938251219 0.9820984210829856 0.9725072986522264 1.0 12.075312538320494 -7.7819024789267335 0.7533165317353622 0.9950062122431683 0.879852801644774 0.41062518078881327 0.055828213064191404 0.4218724152824524 0.4835634392771657 0.010662488167821489 0.01954817575127401 1.6523327888432106e-08 7.7819024789267335 -0.11515341059839435 QSSGASSSS(ph)FSSSR ddPTM_A549_PD325901_60min_R1 2 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QSSGASSS(0.002)S(0.998)FSSSR;QSSGASS(0.001)S(0.022)S(0.977)FSSSR 231.13 2.0681999999999998e-47 85904000.0 4631.6 5006.9 4934.8 3972.5 6374.9 5390.4 4766.6 5320.4 5574.5 5556.3 5692.0 True False 5101.796622396288 5428.849034717078 5269.705203363069 4217.872302797913 5927.149016211092 5346.502369581427 4947.995571383601 5214.280448226939 5340.2231508459345 5205.47426975591 4991.920084560872 1.0220108767716944 1.0875272325587804 1.0556469482877615 0.844939869098275 1.1873485383996267 1.0710312422903594 0.99120087813242 1.0445440551730363 1.0697733658361843 1.0427799687449972 1.0 12.285379123002757 -6.0339103580670095 24.999574368333807 1.0322039047700813 1.058973857373703 0.017205176850260684 0.07817272962817008 2306.9717269808825 1700758.0453956868 0.01040539773041137 0.02754552056338975 9.248890589035015e-07 6.0339103580670095 0.026769952603621805 QSSGASSSSFS(ph)SSR ddPTM_A549_PD325901_60min_R1 1 QSSGASSSSFSSSR 14 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 QSSGASSSSFS(0.947)S(0.052)S(0.001)R 188.9 2.5866e-26 11982000.0 1621.0 1663.0 1792.3 1578.5 2534.7 1473.7 1723.1 1875.0 2325.0 2413.0 1817.0 True False 1785.5627266828699 1803.1468462990074 1913.9362559754463 1676.0003599663962 2356.6714162402927 1461.6986758036771 1788.6735134164987 1837.6016540909543 2227.288335405293 2260.6427681948426 1593.5205189120006 1.1205144241895229 1.1315491861567821 1.2010741206408904 1.0517595098873969 1.478908735890859 0.917276344079757 1.1224665714613713 1.153171002370025 1.3977155041128724 1.4186467895238208 1.0 10.63800188071039 -8.556127098665991 24.998010294734566 1.1924223153117235 1.1473872659896653 0.04686028589122182 0.16701324293356043 972.1251361339896 730894.9707030011 0.03064988783330299 0.03475377970811382 2.7788998884264768e-09 8.556127098665991 -0.04503504932205815 QSSGPSSS(ph)PAAAAAPEKPGPK ddPTM_A549_MK2206_60min_R1 2 QSSGPSSSPAAAAAPEKPGPK 21 1 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 QSSGPS(0.003)S(0.151)S(0.846)PAAAAAPEKPGPK;QSS(0.001)GPS(0.019)S(0.124)S(0.856)PAAAAAPEKPGPK 148.02 2.257e-22 29377000.0 2549.4 3057.3999999999996 3189.2 2600.9 4295.299999999999 2965.5 2955.9 2821.3999999999996 4942.5 4804.4 3975.7000000000003 True False 2979.676393154246 3213.008600788745 3641.4765156409953 3238.1206167588357 3663.467059949504 3279.3072416604145 3492.9487682106574 3221.3420901751206 3823.0316415506672 3719.082703199288 2988.423966262027 0.9970728473581603 1.0751515303926678 1.2185274100166643 1.0835546272268501 1.225885985826781 1.0973366827071158 1.168826380608806 1.0779401204590229 1.2792802108104433 1.244496344958437 1.0 11.545169121756489 -5.521271103645308 6.802497153890474 1.1386104736777816 1.0149339107971223 0.24078213402767124 0.08195449425002138 0.17397981898858272 44.25407877574789 0.013734330847519304 0.06192253523656879 3.011125774602617e-06 5.521271103645308 -0.12367656288065931 QSSGPSSS(ph)PAAAAAPEKPGPK ddPTM_A549_PD325901_60min_R1 2 QSSGPSSSPAAAAAPEKPGPK 21 1 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 QSSGPSS(0.02)S(0.979)PAAAAAPEKPGPK;QSSGPS(0.006)S(0.038)S(0.955)PAAAAAPEKPGPK 173.07 1.0242e-35 52804000.0 6483.200000000001 7455.2 7608.200000000001 6972.4 8568.8 6787.5 8189.0 7694.700000000001 7285.0 7707.0 7435.0 True False 7141.369691320412 8083.475868026671 8124.538203823236 7403.069312530686 7966.957048755207 6732.224850388457 8500.636876192746 7541.223172124631 6978.836784269913 7220.378704715152 6520.542134348222 1.095211033711731 1.2396938324262015 1.245991213065805 1.135345675251998 1.221824333714173 1.0324639748779714 1.3036702625405931 1.1565331557938676 1.0702847463414942 1.1073279730346968 1.0 12.670776203416056 -8.905883290971618 2.000230728172611 1.0262557588074956 1.1835525475871989 0.3164651142774545 0.07627429161181784 0.18448179725447625 1.4566837824505814 0.013266857702835484 0.013637362620542054 1.2419860247209394e-09 8.905883290971618 0.1572967887797032 QSSGS(ph)ATNVASTPDNR ddPTM_A549_MK2206_60min_R1 1 QSSGSATNVASTPDNR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QS(0.002)S(0.114)GS(0.833)AT(0.05)NVASTPDNR 186.75 3.5119999999999997e-34 4005500.0 715.5 637.89 533.14 637.66 659.57 573.2 765.91 763.52 984.66 1078.5 1209.2 True False 836.2589077045039 670.3558763515184 608.7472687660986 793.8867286256456 562.548126727096 633.8556435406339 905.0659329003771 871.7512981819341 761.6360821789132 834.8661009492191 908.9222677777606 0.9200554737745479 0.7375282794979628 0.6697462372161209 0.8734374288866666 0.618917752012479 0.6973705739329704 0.9957572445806484 0.959104347078319 0.8379551356366811 0.9185231020804423 1.0 9.828013108301091 -7.758440999066785 24.999993845004983 0.9297018560425548 0.7477634878174289 0.5198264457855626 0.09021323675536173 54.87126610426902 457503.8154198362 0.014950699514524707 0.021649744376709627 1.7440502787458927e-08 7.758440999066785 -0.181938368225126 QSSGS(ph)ATNVASTPDNR ddPTM_A549_PD325901_60min_R1 2 QSSGSATNVASTPDNR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QSS(0.016)GS(0.981)AT(0.002)NVASTPDNR;QSS(0.001)GS(0.997)AT(0.001)NVASTPDNR 204.78 9.117399999999998e-40 13002000.0 2154.1800000000003 1880.75 2379.0 1756.3600000000001 2171.93 1590.58 1881.8899999999999 2245.99 2175.78 1984.52 2079.34 True False 2372.8707677765005 2039.2474029926982 2540.453246089152 1864.8463682170277 2019.3811295517357 1577.6268438351183 1953.5063537597225 2201.191967504931 2084.3395330787635 1859.2170685196982 1823.5943620222781 1.3012053651806104 1.1182571329795465 1.3931021607633793 1.0226212621917756 1.1073631129854666 0.8651193909623663 1.0712395225840565 1.2070622794994363 1.1429841945592174 1.0195343368236323 1.0 10.832569138626956 -6.280501273483051 24.96256987309741 1.065084220428235 1.2555951238691818 0.46430433400183213 0.10269176026540684 583.1301451429426 763639.2815507696 0.014755658223902908 0.03433698005171588 5.242020638868772e-07 6.280501273483051 0.1905109034409469 QSSGSATNVAS(ph)TPDNR ddPTM_A549_PD325901_60min_R1 1 QSSGSATNVASTPDNR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QS(0.001)S(0.001)GS(0.001)AT(0.003)NVAS(0.498)T(0.498)PDNR 46.408 0.028647000000000002 3125300.0 319.59 221.32 227.69 162.91 209.24 410.16 301.3 175.61 448.33 327.72 199.92 True False 352.0345415302769 239.97141312260752 243.14241261119747 172.97258070454575 194.54370423881292 406.81979294811464 312.7661363776863 172.10732078662014 429.4882492095717 307.02770327095504 175.33110739729614 2.0078270579365873 1.3686756257053574 1.3867614037265077 0.9865481560701831 1.1095789396800049 2.3202944359797524 1.7838599266299369 0.9816131509203841 2.4495838507217176 1.7511308051869972 1.0 7.453938172788254 QSSGSATNVAST(ph)PDNR ddPTM_A549_MK2206_60min_R1 2 QSSGSATNVASTPDNR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QSSGSAT(0.001)NVAS(0.166)T(0.832)PDNR;QSSGSATNVAS(0.125)T(0.874)PDNR 63.037 0.0036829000000000002 5043300.0 788.3299999999999 604.48 426.59000000000003 407.31 801.35 481.12 353.77 408.21000000000004 774.0899999999999 460.47 683.8499999999999 True False 921.3808311819594 635.2454500571667 487.0868765857562 507.1009682848404 683.4724765419259 532.0317990583914 418.0454297269475 466.07501759069487 598.7598509677196 356.44950718969596 514.0311717001498 1.7924610060796646 1.235811143429498 0.9475823712688946 0.9865179316024982 1.3296323533869583 1.035018552082561 0.8132686357215827 0.906705747142064 1.1648317921797058 0.6934394776307923 1.0 9.005712039259304 -5.304050804491981 2.884359864182486 1.051864048759144 1.885818140126487 0.6424907792371912 0.169753854751763 0.14537167258502479 1.781847722691215 0.01906760053185028 0.26734064527166107 4.965342326510321e-06 5.304050804491981 0.8339540913673431 QSSGSATNVAST(ph)PDNR ddPTM_A549_PD325901_60min_R1 1 QSSGSATNVASTPDNR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 QSSGSATNVAS(0.027)T(0.973)PDNR 89.46600000000001 1.2115999999999999e-05 3849200.0 490.45 755.68 348.05 434.39 358.41 403.57 496.25 427.21 572.88 488.77 454.01 True False 540.2401229497927 819.3638056591907 371.67076599467356 461.22128372873124 333.236518047376 400.2834597232073 515.1350653084198 418.6889614102385 548.8038458438639 457.90897878598986 398.16964820651447 1.3568089013896711 2.0578258773612497 0.9334482617366731 1.1583536962353154 0.8369209444978583 1.005308821318285 1.2937577427831468 1.0515340968256865 1.3783166253777877 1.1500348679226575 1.0 8.63723944084103 -5.770780134618463 24.9999963936063 1.1332257464767916 1.7073174476532713 0.5478905139169181 0.21340530100550495 101.83287250207351 272552.7945571419 0.03031265535716744 0.09609954766727048 1.6951957909485211e-06 5.770780134618463 0.5740917011764797 QSSIFGGADVGFSGGIPS(ph)PDKGHR ddPTM_A549_MK2206_60min_R1 4 QSSIFGGADVGFSGGIPSPDKGHR 24 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 QSSIFGGADVGFS(0.299)GGIPS(0.701)PDKGHR;QSSIFGGADVGFS(0.001)GGIPS(0.999)PDKGHR;QSSIFGGADVGFS(0.008)GGIPS(0.992)PDKGHR;QSSIFGGADVGFS(0.186)GGIPS(0.814)PDKGHR 118.55 3.1167e-16 32467500.0 7055.700000000001 8303.6 8182.800000000001 7806.82 10676.3 8747.8 8122.070000000001 7585.910000000001 12404.5 12549.800000000001 13431.9 True False 8246.529664696953 8726.217772456801 9343.244083841444 9719.491250461468 9105.830412809088 9673.486389680314 9597.744985223026 8661.235973375045 9594.90055591608 9714.791463785365 10096.388528418867 0.8167801428684114 0.8642910034508507 0.9254045699155192 0.9626700897160875 0.901889857663302 0.9581135237071963 0.9506116923103463 0.8578548605767083 0.9503299649086184 0.9622045978560155 1.0 13.301551713726399 -2.0000000000000004 0.10789754357170171 1.0308867156077985 0.5142152424756331 0.4517334884862124 0.039438324574735104 58.783734391282536 0.4296017983449012 0.20375448918741992 4.538915013622052 0.00999999999999999 2.0000000000000004 -0.5166714731321654 QSSIFGGADVGFSGGIPS(ph)PDKGHR ddPTM_A549_PD325901_60min_R1 4 QSSIFGGADVGFSGGIPSPDKGHR 24 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 QSSIFGGADVGFS(0.001)GGIPS(0.999)PDKGHR;QSSIFGGADVGFS(0.033)GGIPS(0.967)PDKGHR;QSSIFGGADVGFS(0.001)GGIPS(0.999)PDKGHR;QSSIFGGADVGFS(0.012)GGIPS(0.988)PDKGHR 148.66 2.4336999999999997e-28 38095200.0 6436.51 6845.9 7117.679999999999 6876.0599999999995 7859.92 7465.099999999999 7648.2300000000005 7229.1 7630.13 7120.23 7953.04 True False 7089.939756891771 7422.828018688139 7600.728566886854 7300.778609534708 7307.866334451968 7404.306700646017 7939.287577922048 7084.909929380758 7309.462170591819 6670.657462653947 6974.866498474349 1.0164982739730708 1.0642251031344865 1.0897310462572156 1.046726645037815 1.0477428257659782 1.061569666210185 1.138270901623515 1.0157771379467233 1.047971623856981 0.9563849665241703 1.0 12.767949888151263 -10.0070586058136 0.6263363616708583 1.0007713475319555 1.0627023234567934 0.412074430350844 0.034983904139872776 0.6508660426334862 0.5049362752301944 0.019216856520314088 0.007200791341155409 9.838783274667488e-11 10.0070586058136 0.06193097592483787 QSSLAEPVS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 QSSLAEPVSPSK 12 0 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 QSSLAEPVS(0.986)PS(0.014)K;QSSLAEPVS(0.996)PS(0.004)K 189.1 1.7059000000000003e-19 105862000.0 17085.6 17724.9 16504.6 15163.2 18977.9 14123.400000000001 15770.0 17051.6 18837.5 19435.5 21018.6 True False 18820.11753424606 19218.639528541957 17624.701406222357 16099.79642587422 17644.95777420077 14008.383712998342 16370.135979675117 16711.49246127857 18045.82538417084 18208.33921311683 18433.445447883187 1.0209766582951685 1.0425961648286939 0.9561262682037719 0.8734013655446625 0.9572251603254691 0.7599438614232046 0.8880670749241287 0.90658539709936 0.9789719146749715 0.9877881628042463 1.0 14.17003813396892 -8.864902824082687 4.863679283263166 0.9908966015323006 0.9231574646708774 0.13373322526445897 0.07188675061902383 0.3176680390786395 12.23018110210905 0.01351773721781862 0.014313380386081404 1.3648885041683153e-09 8.864902824082687 -0.06773913686142319 QSSLAEPVS(ph)PSKK ddPTM_A549_MK2206_60min_R1 4 QSSLAEPVSPSKK 13 1 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 QS(0.001)S(0.001)LAEPVS(0.962)PS(0.036)KK;QSSLAEPVS(0.899)PS(0.101)KK;QS(0.002)S(0.007)LAEPVS(0.95)PS(0.041)KK;QSSLAEPVS(0.961)PS(0.039)KK 105.14 5.2901e-10 83673400.0 6417.200000000001 7046.72 6936.56 6016.599999999999 8795.25 6529.16 5734.74 5313.11 8554.73 8625.98 8922.0 True False 7500.266474523199 7405.367949025334 7920.268512271009 7490.667270095435 7501.480375997221 7220.071377494361 6776.66802632308 6066.259613216959 6617.097314096659 6677.365126996704 6706.4211653268085 1.1183709298337372 1.104220532303009 1.180997780637454 1.116939584531806 1.118551935685308 1.0765908074522965 1.0104745674726572 0.9045449821404627 0.9866808467544557 0.9956674301219959 1.0 12.71132737233432 -7.622565518847015 2.3178420081105235 0.9858612480999638 1.1287584539945166 0.838159148607776 0.03127510872772183 0.09224561627426511 1.0078502167532921 0.005117698915619821 0.0080453864991543 2.3847040053926195e-08 7.622565518847015 0.1428972058945528 QSSLAEPVS(ph)PSKK ddPTM_A549_PD325901_60min_R1 3 QSSLAEPVSPSKK 13 1 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 QSSLAEPVS(0.922)PS(0.078)KK;QS(0.007)S(0.006)LAEPVS(0.916)PS(0.071)KK;QSSLAEPVS(0.794)PS(0.206)KK 99.021 6.6288e-05 79307000.0 20311.8 21529.7 22401.7 19050.0 27688.699999999997 21363.3 21934.199999999997 24959.899999999998 26341.0 29251.0 27049.4 True False 22373.838983243153 23344.08337748873 23922.014074365405 20226.67523431095 25743.94123282938 21189.32436777953 22768.91798385478 24462.05521383724 25233.979373294977 27404.0868679931 23722.49528027423 0.9431486325069474 0.9840483938002863 1.0084105315117116 0.8526369167888451 1.0852121974805924 0.8932165068401937 0.9598028249071938 1.0311754697313806 1.0637152236795924 1.1551941119271798 1.0 14.533968149093532 -8.262358773562514 22.89681790306976 1.0310100137510327 0.9616520182996283 0.29882296135543274 0.06896741659042085 26.827197350950144 668116.8740694877 0.0089590055530173 0.011156862257240567 5.4656425597038305e-09 8.262358773562514 -0.06935799545140442 QSSLS(ph)EK ddPTM_A549_MK2206_60min_R1 1 QSSLSEK 7 0 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 QS(0.034)S(0.235)LS(0.731)EK 93.325 0.012163 86695000.0 14194.0 13904.0 10384.0 7621.0 13030.0 11560.0 10709.0 12222.0 11618.0 16735.0 16670.0 True False 16589.600190017798 14611.65421121434 11856.60734303779 9488.145342119695 11113.30426073662 12783.271527093044 12654.686680458719 13954.505928305212 8986.541550133665 12954.55187703773 12530.378931405277 1.3239503993321997 1.1660983511514322 0.9462289534852938 0.7572113655987898 0.8869088733528243 1.0201823581770488 1.0099205099649369 1.1136539449202612 0.717180350197584 1.033851565699209 1.0 13.613142423434525 -5.643977626387702 2.601858426203167 0.8968543254135211 1.3088196987722707 0.47774398351761316 0.11967515313856197 0.18200786077868455 2.2945789329555377 0.019196431037547448 0.11329435283821161 2.269981791855326e-06 5.643977626387702 0.4119653733587496 QSSPS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 QSSPSPSR 8 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 QS(0.001)S(0.02)PS(0.49)PS(0.49)R;QS(0.112)S(0.363)PS(0.505)PS(0.02)R;QS(0.004)S(0.045)PS(0.59)PS(0.361)R 80.916 0.0038195 13065100.0 2530.5299999999997 2657.48 2459.22 1997.69 2530.91 1576.2599999999998 1877.22 2324.55 2617.35 2973.51 2732.7799999999997 True False 2787.427542722272 2881.4351660268717 2626.1174576911976 2121.0827742168303 2353.1476127655033 1563.423461167337 1948.6586343541996 2278.1850266758024 2507.351881579802 2785.76207113761 2396.6653845197234 1.1630441031637193 1.202268445415167 1.0957380511495372 0.8850141483734417 0.9818423664666309 0.6523328084369346 0.8130707970085271 0.9505644974015997 1.0461835422562584 1.1623491911432846 1.0 11.226812782805421 -6.037188372454829 4.533488335371443 0.9658508818206353 1.1780475486317092 0.3641399687247686 0.1264832895044895 0.18342160432566512 8.735794664100565 0.018183313062030255 0.05338071730964687 9.179343619633707e-07 6.037188372454829 0.21219666681107396 QSSPS(ph)PSRDR ddPTM_A549_MK2206_60min_R1 2 QSSPSPSRDR 10 1 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 QSS(0.003)PS(0.985)PS(0.012)RDR;QS(0.001)S(0.003)PS(0.889)PS(0.107)RDR 88.552 0.00019557 29925000.0 3240.7 2944.7 3152.5 2959.5 4538.299999999999 3093.8999999999996 2613.7 2503.5 4019.1000000000004 4379.6 4354.5 True False 3787.6509324919443 3094.5726521693673 3599.5719037872345 3684.577632857003 3870.722081849659 3421.294444435394 3088.575457719204 2858.3787916472006 3108.78026718387 3390.2453182357017 3273.1574719138716 1.1571856731589634 0.9454395881417575 1.099724634294024 1.125695193241823 1.1825651882206514 1.045258125767748 0.9436073529066296 0.8732787273983055 0.9497802332639109 1.0357721396927984 1.0 11.676467296908562 -7.58943802930423 4.807266449455965 0.9644518876414149 1.0963901701491563 0.4983249493593116 0.06759210237837283 0.13935424486774212 6.313516396468513 0.010256686156505622 0.015425006465965263 2.5737239901085618e-08 7.58943802930423 0.13193828250774142 QSSPSPS(ph)RDR ddPTM_A549_PD325901_60min_R1 1 QSSPSPSRDR 10 1 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 QSS(0.005)PS(0.165)PS(0.83)RDR 60.255 0.006727299999999999 4027600.0 198.14 413.99 242.25 322.52 254.06 268.71 342.71 249.12 308.62 304.78 333.21 True False 218.25502693704138 448.87839019803147 258.69054176758993 342.4413279039352 236.2157020594189 266.5217148505165 355.7520165881077 244.1511061691407 295.6497746549596 285.53613878591966 292.2272823922221 0.7468673874334002 1.5360591472618055 0.8852374756042807 1.1718321612569929 0.8083287095089723 0.9120357027198985 1.217381257752053 0.8354836145704068 1.0117117479063569 0.9771029468859731 1.0 8.190947064475235 QSSS(ph)PEFR ddPTM_A549_MK2206_60min_R1 1 QSSSPEFR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 QS(0.094)S(0.42)S(0.486)PEFR 53.123999999999995 0.025693999999999998 3840000.0 593.28 775.64 565.03 599.69 926.26 714.84 556.36 646.09 1068.9 1097.3 949.24 True False 693.4111596966152 815.1167629736976 645.1597502924349 746.6140769211075 790.0083810092026 790.4838943276111 657.4434103595123 737.6752360676414 826.7958566825507 849.4191678920527 713.5175103087664 0.9718208028231144 1.1423920943733608 0.9041961002656396 1.046385079741097 1.1072025137369588 1.1078689491243716 0.9214117395311172 1.0338572290236032 1.1587604294739233 1.190467165304011 1.0 9.478805024837563 -6.513527346245238 24.659556130597956 1.06639693776079 1.0123500276325017 0.09905481269334226 0.08741145213493937 842.479295439141 2221606.383484752 0.01230915437674684 0.026794958295297846 3.065297660577545e-07 6.513527346245238 -0.05404691012828833 QSSSEQCS(ph)DGEGR ddPTM_A549_PD325901_60min_R1 2 QSSSEQCSDGEGR 13 0 A0A3B3IRT3;O60343-2;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 QS(0.001)S(0.001)S(0.001)EQCS(0.997)DGEGR;QS(0.004)S(0.003)S(0.019)EQCS(0.974)DGEGR 59.306000000000004 0.0096451 7330100.0 662.0 446.80999999999995 448.39 567.38 500.93 287.46 527.48 675.4200000000001 501.6 428.82000000000005 747.79 True False 729.2057526613575 484.46424677983157 478.8204417881105 602.4257739865275 465.7464049146846 285.1190210670591 547.5535400481311 661.9482182432607 480.51949636098675 401.7442320171212 655.8165706313725 1.1119050437522966 0.7387191304321947 0.7301133628373204 0.9185888264557812 0.7101778542532066 0.4347542191447942 0.8349187327197091 1.009349638125162 0.7327041094713076 0.6125862779440767 1.0 9.357148544792798 -10.936618752495235 0.865712367771269 1.0189196622394507 0.7893780704392348 0.0 0.20407769053277314 1.1000894775253094 1.250284802477092 0.17928885802419578 0.030110811878301606 1.1571275864950113e-11 10.936618752495235 -0.22954159180021594 QSSSSAGDS(ph)DGEREDSAAER ddPTM_A549_PD325901_60min_R1 1 QSSSSAGDSDGEREDSAAER 20 1 I3L3Z2;Q9BRA0 I3L3Z2 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit 1 QS(0.001)S(0.001)S(0.001)S(0.001)AGDS(0.996)DGEREDSAAER 69.98100000000001 0.00026621 25484000.0 511.97 355.46 445.22 316.26 673.19 557.83 538.62 230.31 223.28 351.95 155.83 True False 563.9448175076061 385.4158616869783 475.4353065253519 335.79466192142695 625.907456779423 553.2872174279469 559.1174788441734 225.71628637530017 213.89631807711558 329.7278169358371 136.66389788775837 4.126509094382572 2.8201731960222527 3.4788654053744716 2.457083890562042 4.579903445264519 4.048525074869151 4.091186388546995 1.6516160439143939 1.5651267187826587 2.412691442524503 1.0 7.0944883704130905 -8.351997996276328 4.664012833594418 1.2841787438406214 3.6208690125297354 0.6562017863120173 0.6796588727780616 0.0787915860636543 2.9605089520766583 0.10098685787798509 0.12281182042584635 4.446333188887981e-09 8.351997996276328 2.336690268689114 QSST(ph)PSAPELGQQPDVNISEWK ddPTM_A549_PD325901_60min_R1 1 QSSTPSAPELGQQPDVNISEWK 22 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 QS(0.262)S(0.262)T(0.4)PS(0.075)APELGQQPDVNISEWK 151.95 1.4173e-27 8564700.0 2128.2 2083.8 1594.2 1718.2 2275.3 2026.5 2273.8 2472.0 2859.5 2333.4 2681.6 True False 2344.2532973019656 2259.409139096735 1702.3919987033735 1824.3293116846758 2115.4907773588757 2009.9968558839346 2360.3307032711023 2422.6940207535154 2739.32515917911 2186.0687257794652 2351.780200062973 0.9967994871456074 0.960722919189572 0.7238737696055902 0.7757227106665096 0.8995274206757203 0.8546703709088601 1.0036357578007928 1.0301532518594396 1.164787916449743 0.9295378563527873 1.0 11.199537515288265 -7.947300002591902 2.180155626748038 1.076866893194431 0.8614960832388606 0.38520036180372497 0.09237908541182138 0.18541428828233622 1.7846069584732527 0.015589107917964579 0.02212633248433449 1.1290157420561428e-08 7.947300002591902 -0.21537080995557034 QSSTAT(ph)SPTPSSDR ddPTM_A549_MK2206_60min_R1 1 QSSTATSPTPSSDR 14 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QS(0.001)S(0.007)T(0.007)AT(0.366)S(0.262)PT(0.35)PS(0.004)S(0.004)DR 60.628 0.007335300000000001 4180100.0 423.36 297.28 206.95 279.68 243.05 188.67 210.8 233.22 431.2 401.39 488.78 True False 494.8128178417596 312.4102822144561 236.29862188382802 348.20161255531235 207.29766696638816 208.63493417098988 249.09963136060313 266.2796492062952 333.53388848490596 310.71572022253787 367.40243635826454 1.3467869803651862 0.850321748846042 0.6431601930189884 0.947738986182909 0.5642250743385009 0.5678648629524711 0.6780021216780909 0.7247628835717309 0.9078162131719443 0.8457094713426183 1.0 8.521217383209104 -8.970406200282538 2.969609888042044 0.9634482905158015 0.7743412988114073 0.05419082718037482 0.21240791445244775 0.36789806246464635 6.437097708101791 0.03888356170840147 0.03967878541742385 1.070517570289465e-09 8.970406200282538 -0.18910699170439416 QSSTAT(ph)SPTPSSDR ddPTM_A549_PD325901_60min_R1 1 QSSTATSPTPSSDR 14 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QSST(0.003)AT(0.92)S(0.077)PTPSSDR 121.76 1.9361e-06 5219000.0 382.48 450.63 428.69 363.55 409.69 468.63 502.86 390.62 370.23 313.2 385.11 True False 421.30908803310587 488.60617158612285 457.7834813223869 386.00565781804454 380.91478775377203 464.81363265378155 521.9966124755503 382.82877766453817 354.6705206095062 293.4244985489534 337.74391141342875 1.2474217115268316 1.4466764760950057 1.355415940457973 1.142894497202465 1.127821331137183 1.3762309754410587 1.5455396672912327 1.13348831682097 1.050116696775498 0.8687780553052682 1.0 8.39978595176735 -8.495554347986893 7.40721583763794 1.026918665673206 1.3164633307132945 0.593989218593474 0.12479886713008378 0.11827877309313985 25.4673938581947 0.020042773037317524 0.02387384074256841 3.194814537938355e-09 8.495554347986893 0.28954466504008836 QSSTATS(ph)PTPSSDR ddPTM_A549_PD325901_60min_R1 1 QSSTATSPTPSSDR 14 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QS(0.008)S(0.008)T(0.006)AT(0.251)S(0.697)PT(0.029)PS(0.001)S(0.001)DR 53.754 0.019288999999999997 4597100.0 383.98 407.03 326.46 370.63 253.84 288.86 251.51 465.98 346.33 349.96 315.85 True False 422.96136692886404 441.33184657190935 348.615538763457 393.5229733381975 236.01115410046006 286.50761993122774 261.0813506815528 456.68566334576167 331.7749544950173 327.8634658754527 277.00245233811506 1.526922824540876 1.593241658500591 1.2585287091174537 1.4206479762780404 0.8520182839839261 1.034314380659383 0.942523607563125 1.6486701092029377 1.197732914256101 1.1836121417266572 1.0 8.113754938469318 -6.130505737323017 1.515939772839913 1.1126140658846337 1.5615230441138843 0.33703881886155573 0.2127430061964229 0.3517609928087807 1.470747616607142 0.03159262788543282 0.14250213490496708 7.404474855756061e-07 6.130505737323017 0.4489089782292506 QSSTPGSLFLS(ph)PPAPAPK ddPTM_A549_MK2206_60min_R1 2 QSSTPGSLFLSPPAPAPK 18 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 QS(0.001)S(0.001)T(0.001)PGS(0.004)LFLS(0.994)PPAPAPK;QS(0.031)S(0.026)T(0.026)PGS(0.026)LFLS(0.891)PPAPAPK 84.14 0.00012021 3578700.0 1813.93 1743.75 1790.27 1885.05 3107.8999999999996 1945.73 2667.8599999999997 2166.57 3711.67 2590.1800000000003 2819.8999999999996 True False 2120.0770376693654 1832.4994268415564 2044.1572060882381 2346.8873346231085 2650.7320270102337 2151.6258571289577 3152.575628660808 2473.6879323423523 2870.9826713190423 2005.0565390418633 2119.6410047192394 1.0002057107543942 0.8645329198489832 0.9643884042331029 1.107209819680748 1.2505570618366768 1.015089749791831 1.487315833974625 1.1670315524349884 1.3544664709387064 0.9459415696232233 1.0 11.049604226541184 -6.342470234213287 2.7815382502470882 1.1886344125587163 0.9289573648443193 0.3016077582211928 0.15252663204788608 0.2500507992339135 3.7498747448788614 0.022842749607753943 0.06155185475255023 4.5449568648409804e-07 6.342470234213287 -0.2596770477143969 QSSTPGSLFLS(ph)PPAPAPK ddPTM_A549_PD325901_60min_R1 2 QSSTPGSLFLSPPAPAPK 18 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 QSSTPGSLFLS(1)PPAPAPK;QSST(0.001)PGS(0.005)LFLS(0.994)PPAPAPK 160.25 9.2664e-23 8061500.0 2681.4 3170.6000000000004 3089.4 3248.2 3537.8 2904.2 3030.5 3228.9 3835.8 3440.8 3752.0 True False 2953.6137540576483 3437.7975892216687 3299.0652620713827 3448.8339368025627 3289.317132747429 2880.5491580844428 3145.8273358532297 3164.4970564769533 3674.594665353816 3223.5473007893997 3290.527785887629 0.8976109445800966 1.0447556783947087 1.0025945613406972 1.0481096532884102 0.9996320793444163 0.8754064227746391 0.9560251547927999 0.961698931718129 1.116718929137559 0.979644455401503 1.0 11.68410328899165 -8.737502963514792 24.991949644746494 1.0551172817086718 0.9761341143011062 0.12714110241092502 0.060749295113850334 246.26457782942109 257124.05507435434 0.011008257529353978 0.012478676273548647 1.8301936174939286e-09 8.737502963514792 -0.07898316740756561 QSSVS(ph)STASVNLGDPGSTR ddPTM_A549_MK2206_60min_R1 1 QSSVSSTASVNLGDPGSTR 19 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 QSS(0.035)VS(0.864)S(0.082)T(0.019)ASVNLGDPGSTR 246.48 8.607199999999999e-86 11053000.0 1989.5 2446.5 2113.6 1941.1 3026.4 2198.9 1576.8 1789.8 3326.8 2937.0 3028.0 True False 2325.278961394985 2571.0164001536177 2413.3402619650096 2416.66958713929 2581.220569047838 2431.586138488311 1863.2841495702048 2043.5096310326176 2573.2851118079416 2273.529660164912 2276.0640314514217 1.0216228231119575 1.129588783367447 1.0603129914697735 1.0617757469671034 1.1340720354874294 1.0683294076475145 0.8186431154056806 0.8978260729024804 1.1305855530641575 0.9988865114287258 1.0 11.152325429546478 -7.539541028263154 24.99971501741236 1.02792928147596 1.0838098680149446 0.16190578522592136 0.08655855105311931 569.2658643108706 854111.6064298969 0.015533827360881108 0.02304379977985073 2.8870810206802793e-08 7.539541028263154 0.055880586538984645 QSSVTQVTEQS(ph)PK ddPTM_A549_MK2206_60min_R1 2 QSSVTQVTEQSPK 13 0 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;C9JWN0 Q14966-3 ZNF638 Zinc finger protein 638 1 QSSVTQVTEQS(1)PK;QSSVTQVT(0.001)EQS(0.999)PK 248.67 1.4288999999999999e-68 37822000.0 6484.4 7337.0 6690.9 6037.799999999999 10198.5 7593.0 7094.1 6831.4 10160.8 9968.3 9789.099999999999 True False 7578.808191640934 7710.421961139206 7639.770230309272 7517.061271047137 8698.314159871252 8396.486220174522 8383.006142482234 7799.771870285078 7859.395023463432 7716.45410671498 7358.196304584242 1.0299817887325522 1.0478684778137168 1.0382667047832912 1.021590204975086 1.1821258634336924 1.1411065800111113 1.1392745987572421 1.0600113869516812 1.0681143446209689 1.048688263713152 1.0 12.84513645021902 -10.093291519035901 0.7953591375025442 1.0044436856712406 1.0834400486789955 0.13921640715540673 0.051064253638547455 0.6418914885512258 0.8063307906417575 0.026120415305161425 0.010933928156602988 8.066933576630735e-11 10.093291519035901 0.07899636300775481 QSSVTQVTEQS(ph)PK ddPTM_A549_PD325901_60min_R1 2 QSSVTQVTEQSPK 13 0 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;C9JWN0 Q14966-3 ZNF638 Zinc finger protein 638 1 QSSVTQVTEQS(1)PK;QSSVTQVTEQS(1)PK 233.14 6.7499e-47 58145000.0 20639.3 22278.0 21792.0 20401.2 23879.0 19790.3 22415.0 21911.0 23332.0 21606.0 25806.0 True False 22734.5865421504 24155.445244647788 23270.93616594149 21661.335789513094 22201.82141807787 19629.134358253043 23268.01509095865 21473.96791615302 22351.437179215616 20241.793472696983 22632.025597712203 1.004531673225421 1.0673125629148097 1.028230374937976 0.9571099014532206 0.9809913532583747 0.8673167266228828 1.0281013067301734 0.9488310192757891 0.9876021517700585 0.8943871764948498 1.0 14.46607809314208 -6.13456004302148 5.850766673144318 0.9812975899647522 1.0385406686079202 0.23129511754730125 0.04933162607156776 0.23722021482783523 10.304020253698889 0.0056793961919531545 0.015353437013600625 7.335672886734091e-07 6.13456004302148 0.05724307864316791 QSSVTQVTEQS(ph)PKVQSR ddPTM_A549_MK2206_60min_R1 1 QSSVTQVTEQSPKVQSR 17 1 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;C9JWN0 Q14966-3 ZNF638 Zinc finger protein 638 1 QSSVTQVT(0.003)EQS(0.991)PKVQS(0.005)R 76.417 0.00012194 6879300.0 1596.0 1942.3 1615.3 1131.6 1434.7 1705.9 1300.7 827.24 1956.2 2887.7 2378.1 True False 1865.365781546315 2041.1547737659384 1844.3738290840647 1408.8420507994542 1223.6575305355973 1886.4172057152273 1537.0203534664915 944.5038033162496 1513.1238234094917 2235.366564405248 1787.5521377789373 1.04353083869434 1.1418714624470234 1.031787431596669 0.7881403965928309 0.684543686684301 1.0553075157064407 0.859846446423803 0.5283783243882391 0.8464781482063918 1.250518246244122 1.0 10.803769606451377 -6.082748802891698 5.323586631052513 0.8773301963918616 1.0919201240879453 0.19292709069109149 0.18070133795198468 0.22614247577715416 10.770184389475913 0.02157297800189629 0.0594257093470707 8.265158703735625e-07 6.082748802891698 0.21458992769608365 QSSYSQQPYNNQGQQQNMESSGS(ph)QGGR ddPTM_A549_MK2206_60min_R1 2 QSSYSQQPYNNQGQQQNMESSGSQGGR 27 0 Q92804-2;Q92804;A0A075B7F2 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 QSSYSQQPYNNQGQQQNMES(0.025)S(0.072)GS(0.903)QGGR;QSSYSQQPY(0.003)NNQGQQQNMES(0.026)S(0.061)GS(0.91)QGGR 59.838 0.00019313 3825300.0 393.04999999999995 395.87 0.0 223.26 390.76 202.4 402.25 273.69 380.46000000000004 658.5 571.18 True False 459.3872308501126 416.01809210251884 0.0 277.95871002252227 333.27972163664185 223.81783365775354 475.3336181916631 312.4863956404722 294.2864174697757 509.74439265188784 429.340242233957 1.0699840957367848 0.9689706465386988 0.0 0.6474089374344193 0.7762601518611674 0.5213064410016107 1.107125704588957 0.7278292712896721 0.6854386999423467 1.1872737342289867 1.0 8.74597759328586 -7.736968426453405 24.99412424501171 0.8538771575889244 0.6520196087844552 0.14923776482928752 0.29752380821927393 430.7193251096478 439926.8976727753 0.044286308693507956 0.0656702935144407 1.8324476378971274e-08 7.736968426453405 -0.20185754880446916 QSTKRS(ph)PQQTVPYVVPLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 QSTKRSPQQTVPYVVPLSPK 20 2 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 2 QS(0.271)T(0.293)KRS(0.374)PQQT(0.062)VPYVVPLS(1)PK;QS(0.256)T(0.276)KRS(0.346)PQQT(0.127)VPY(0.006)VVPLS(0.989)PK 71.86 0.00020842 5185500.0 2741.3 4012.3 3450.2 3232.6 4011.6 3483.2 2709.1 2604.1 4372.0 3922.6 4142.2 True False 3203.964421649696 4216.508932081075 3939.4902402685852 4024.5871451169305 3421.4989541343866 3851.789912038966 3201.3084028416024 2973.2391497217804 3381.7489806493713 3036.481935635982 3113.577421095798 1.0290299511878163 1.354232884498857 1.2652616933745986 1.292592603559063 1.098896379114356 1.237094631384936 1.0281769071009412 0.9549270011970261 1.0861297225938877 0.9752389373916122 1.0 11.604357437859052 -7.7636973017719155 24.935206358750357 1.0330584832725185 1.220104920665705 0.5500584563515842 0.09053105961190346 34.78655796519385 384164.9613316789 0.013401050788086467 0.019000771551193396 1.723069115789651e-08 7.7636973017719155 0.1870464373931866 QSTKRS(ph)PQQTVPYVVPLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 QSTKRSPQQTVPYVVPLSPK 20 2 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 2 QS(0.243)T(0.271)KRS(0.382)PQQT(0.104)VPYVVPLS(1)PK;QS(0.228)T(0.253)KRS(0.35)PQQT(0.169)VPY(0.002)VVPLS(0.999)PK 81.839 5.0604e-05 12383600.0 4702.799999999999 4395.3 4580.700000000001 4309.9 4905.0 5187.4 4070.3999999999996 4917.0 5335.700000000001 4850.299999999999 4491.9 True False 5180.22479398162 4765.70735630669 4891.573847986792 4576.112734506917 4560.489721331376 5145.15553427699 4225.301299408346 4818.926577688119 5111.459084396567 4544.051230242622 3939.42477650017 1.3149698465834878 1.2097470129993442 1.2416974877059392 1.161619524201802 1.157653713439597 1.306067719574025 1.0725680877608104 1.223256401907821 1.297514072330541 1.1534808983659817 1.0 11.943769271532716 -10.907519516449002 1.1069916750363071 0.9973960131492732 1.2220418940055648 0.25404573970452027 0.08138764205122062 0.2904358253529277 0.6200256553880233 0.05119846848901936 0.011606491336438833 1.2373155858461243e-11 10.907519516449002 0.22464588085629167 QSTLYSFFPKS(ph)PALSDANK ddPTM_A549_MK2206_60min_R1 2 QSTLYSFFPKSPALSDANK 19 1 P52701;P52701-2;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 QSTLYSFFPKS(1)PALSDANK;QSTLYSFFPKS(1)PALSDANK 180.37 6.2274e-36 107649000.0 11050.1 11819.4 11843.3 12021.5 14613.2 12022.6 10826.3 10654.099999999999 17276.7 17666.6 16478.5 True False 12915.086730993067 12420.956975260839 13522.858026367425 14966.768039665641 12463.617637988993 13294.823552044005 12793.298572102925 12164.35130181283 13363.555035220708 13675.702790013422 12386.433666536408 1.0426800061009398 1.0027871871479601 1.0917475029879842 1.2083193954447395 1.0062313312718179 1.0733374843770997 1.032847623175484 0.9820705159610581 1.078886416783882 1.1040871939564125 1.0 13.596473242392719 QSTLYSFFPKS(ph)PALSDANK ddPTM_A549_PD325901_60min_R1 2 QSTLYSFFPKSPALSDANK 19 1 P52701;P52701-2;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 QSTLYSFFPKS(1)PALSDANK;QSTLYSFFPKS(1)PALSDANK 188.3 3.4427e-44 183528000.0 22020.0 21537.5 25290.0 23339.0 28000.0 24904.0 26486.0 29333.0 28028.0 26839.0 27515.0 True False 24255.454189732765 23352.54071086283 27006.331481124256 24780.59702328522 26033.37659475607 24701.19008089487 27493.93922369531 28747.930303706657 26850.08062999551 25144.38095962761 24130.82943195579 1.0051645451362703 0.9677471210308962 1.1191630008938076 1.026926865202112 1.0788430073721706 1.0236361808676069 1.139369838124414 1.191336186133601 1.1126878462966836 1.0420023493402844 1.0 14.558589884692998 -5.748445069907587 24.993007478515725 1.0704386434656323 0.9864558007789987 0.2861012823645497 0.05571961532122785 282.81399732762685 543949.2283065578 0.008932405512395885 0.03416379736380612 1.7846576999347394e-06 5.748445069907587 -0.08398284268663359 QSVDKVT(ph)SPTKV ddPTM_A549_MK2206_60min_R1 3 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QS(0.001)VDKVT(0.588)S(0.391)PT(0.02)KV;QSVDKVT(0.589)S(0.41)PT(0.001)KV;QSVDKVT(0.881)S(0.119)PTKV 131.66 6.5994e-08 1123584000.0 12477.9 14929.800000000001 14849.3 12809.5 18548.6 12125.5 14040.300000000001 12668.1 19018.5 18926.6 19328.399999999998 True False 14583.864464634573 15689.663049668292 16955.154027250683 15947.8280750403 15820.125511181834 13408.612361744512 16591.240769413067 14463.841969429162 14710.84011630376 14651.067914905418 14528.624843297765 1.0038021231832062 1.0799138403595112 1.1670171272315772 1.0976832458026633 1.0888935244604279 0.9229099454605348 1.141969109145716 0.995541018192201 1.0125418114220255 1.008427712390422 1.0 13.826610535676233 -7.054086199783057 24.83118046410242 1.0111265085583476 1.092422404206176 0.2749888355055843 0.059452050163915804 257.33177317635216 118141.6210549898 0.008206564327248915 0.0142142497245357 8.829046420509278e-08 7.054086199783057 0.08129589564782846 QSVDKVT(ph)SPTKV ddPTM_A549_PD325901_60min_R1 4 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QSVDKVT(0.468)S(0.468)PT(0.063)KV;QSVDKVT(0.496)S(0.496)PT(0.007)KV;QSVDKVT(0.494)S(0.494)PT(0.012)KV;QSVDKVT(0.494)S(0.494)PT(0.012)KV 161.76 4.7755e-14 1179088000.0 25904.8 26878.0 29701.199999999997 24524.0 34666.3 27614.7 32347.300000000003 35196.2 28784.0 30785.8 31143.300000000003 True False 28534.63622589417 29143.103388349213 31716.902039824738 26038.79178195493 32231.458680242606 27389.81503882461 33578.29420262176 34494.18418011524 27574.308579056324 28841.979334062515 27312.871533644513 1.044732194882719 1.0670098657495675 1.161243774780519 0.9533524056553282 1.1800831209028784 1.002817115186344 1.2293945058563094 1.2629277788541806 1.0095719355282644 1.0559848787240997 1.0 14.737293379100015 -8.948821099895998 24.999502561108773 1.0042223239605539 1.111596409907039 0.1596547203172871 0.09043477724399798 107.022814116711 52277.77649005135 0.01499247640311204 0.015958986537959702 1.12506833097387e-09 8.948821099895998 0.10737408594648512 QSVDKVTS(ph)PTKV ddPTM_A549_MK2206_60min_R1 1 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QSVDKVT(0.246)S(0.751)PT(0.003)KV 96.464 0.0020353 15651000.0 1584.2 2210.0 1796.8 1567.4 2235.0 1978.6 1664.2 1677.9 3235.0 2615.1 3030.8 True False 1851.574230028618 2322.479560326789 2051.61325827911 1951.413070363261 1906.2344606865968 2187.9741387116155 1966.5635982462786 1915.7474633532408 2502.2776652334646 2024.3470937341722 2278.168714175351 0.8127467551053825 1.0194502039623863 0.900553697148699 0.8565709195377268 0.8367398115975855 0.9604091765010547 0.8632212294066786 0.8409155351107089 1.0983724118690816 0.888585240038705 1.0 11.153658877226567 -8.76087375078517 24.999999923239017 1.0464536420483839 0.8902922298973316 0.2197154646940256 0.07667441104649332 8.053945175339475 355972.4915473428 0.010876914550535417 0.011972705945895579 1.7343080870792579e-09 8.76087375078517 -0.15616141215105228 QSVDKVTS(ph)PTKV ddPTM_A549_PD325901_60min_R1 2 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 QSVDKVT(0.108)S(0.871)PT(0.02)KV;QSVDKVT(0.117)S(0.883)PTKV 157.2 6.4998e-13 218475000.0 6706.4 7389.4 8094.6 7612.2 8132.0 8677.8 8829.0 9672.8 7728.7 8704.8 8043.6 True False 7387.228791009259 8012.130671101552 8643.948232784045 8082.388305439466 7560.836373877011 8607.130873915425 9164.992426414181 9479.868415835197 7403.889616278225 8155.177442429541 7054.288192581485 1.0471969090769364 1.135781591617899 1.225346625599206 1.1457411555625363 1.071807128864997 1.2201274797600357 1.2992086765114557 1.3438447873173838 1.049558710128173 1.1560595796193562 1.0 12.784284800816824 -8.968092588399372 21.719572675681665 1.0218636713976321 1.186205872953899 0.20371565625476318 0.09311745421026153 30.360226448053552 20666.765143226512 0.015480515785383094 0.016328713011623835 1.0762357436002724e-09 8.968092588399372 0.16434220155626678 QSVENDIHGLR ddPTM_A549_MK2206_60min_R1 2 QSVENDIHGLR 11 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 171.67 4.339899999999999e-15 52862000.0 1090.1100000000001 1573.31 1370.26 1057.42 2129.56 1100.07 1336.6799999999998 1437.06 2062.13 2266.09 1828.68 False True 1274.093917369332 1653.384758849657 1564.5834724452 1316.4879474693873 1816.3045450110744 1216.4786772326331 1579.5374537338287 1640.7676558116734 1595.0608475449412 1754.1786951321446 1374.5682869995314 0.9269047812462491 1.202839301973668 1.1382362646096267 0.9577464866027686 1.321363632632457 0.8849896281893835 1.1491153030903347 1.193660345091486 1.1604085898320198 1.276167005832241 1.0 10.424762864752987 -10.954162192174152 1.258601773939005 1.000898275764727 1.1123836139698995 0.0 0.14950510212243098 0.8261434622270699 2.3565879298643297 0.07733795480551227 0.018627951970012897 1.1113166160438444e-11 10.954162192174152 0.11148533820517259 QSVENDIHGLR ddPTM_A549_PD325901_60min_R1 2 QSVENDIHGLR 11 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 211.63 6.944199999999999e-31 85956000.0 3674.1000000000004 4081.2 3666.7 3461.3 5041.2 3156.8999999999996 3878.0 4551.5 3790.0 4362.0 4977.700000000001 False True 4047.0919272705337 4425.137046972646 3915.544311658296 3675.096639817347 4687.123503195867 3131.191253066858 4025.579412123026 4460.716761917324 3630.7194800800253 4086.582575576422 4365.4744562401 0.9270680582005322 1.0136669201321893 0.8969344228005585 0.8418550324041152 1.0736802036479665 0.7172625299848148 0.9221401825794168 1.0218171716801785 0.8316895486331845 0.9361141879400934 1.0 12.091922744580165 -5.778096328314924 24.90420795243025 0.9161372598077658 0.9703675194109607 0.04667426839781952 0.09523891341480846 547.2978228492696 818281.8395174966 0.013312904257822038 0.041556836830793725 1.666877451222431e-06 5.778096328314924 0.05423025960319483 QSVENDIHGLRK ddPTM_A549_MK2206_60min_R1 3 QSVENDIHGLRK 12 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;; 120.55 4.6684e-06 80994220.0 2719.9 3093.955 2984.3 2964.2 4156.5 3050.6 2764.3 3341.2599999999998 4813.68 4160.6 5278.4 False True 3178.9526248294655 3251.424094149715 3407.5186145827874 3690.4291330679935 3545.0843560822536 3373.4124671756094 3266.5375283212284 3814.893837179598 3723.3891658673947 3220.717570337806 3967.6276035710607 0.801222529545931 0.8194882229429176 0.8588302519913543 0.9301349576624643 0.8935022916191788 0.8502341460018505 0.8232974096110187 0.961505014670733 0.9384421971749971 0.8117489573464509 1.0 11.954060907238313 -2.0000000650235856 0.055192366405710146 1.2156517441610146 0.23862244866714005 0.0 0.06850316003658566 132.2496465294928 0.5330655059425816 2.0272075755167784 10.58432888564956 0.009999998502776723 2.0000000650235856 -0.9770292954938746 QSVENDIHGLRK ddPTM_A549_PD325901_60min_R1 4 QSVENDIHGLRK 12 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 174.9 2.1082000000000002e-16 131879400.0 8129.099999999999 8188.9 8843.0 8784.5 10291.5 9395.7 9399.1 11033.800000000001 10161.4 10552.1 11245.2 False True 8954.360247672876 8879.00734194705 9443.139157278843 9327.098613952996 9568.660543747583 9319.184534334401 9756.787893884866 10813.722203151348 9734.351695220363 9885.838605167348 9862.111689196054 0.9079556721591766 0.900315026007463 0.957516955280866 0.9457506574551204 0.9702445931767385 0.9449481843268487 0.9893203607269455 1.096491557178143 0.9870453714171933 1.0024058656724895 1.0 13.267680876229251 -6.491286684675513 0.6840484649972035 1.001025446008513 0.8984131198095151 0.5593071959589748 0.033848516260731557 0.6537872165185867 0.4670798734923454 0.006243394256405925 0.03804687991926254 3.2263636447964085e-07 6.491286684675513 -0.10261232619899796 QSVTSFPDADAFHHQVHDDDLLS(ph)S(ph)SEEECKDR ddPTM_A549_PD325901_60min_R1 1 QSVTSFPDADAFHHQVHDDDLLSSSEEECKDR 32 1 P50402;Q5HY57 P50402 EMD Emerin 2 QSVTS(0.001)FPDADAFHHQVHDDDLLS(0.666)S(0.666)S(0.666)EEECKDR 51.566 0.0053614 4226800.0 622.69 1162.3 937.79 987.4 964.29 927.38 1232.8 1338.2 1111.1 795.59 1528.3 True False 685.9050303998503 1260.251100092204 1001.4340687893841 1048.389455451897 896.5615970199046 919.8277247518588 1279.7148786140444 1311.5085512024093 1064.4043309543313 745.3563116237614 1340.3287886919159 0.5117438617947274 0.9402551901628085 0.7471555317160101 0.7821882692492677 0.6689116913581312 0.6862702140790081 0.9547768349159858 0.9784976360034515 0.7941367371457633 0.5560996062400378 1.0 10.3883712283537 -7.762167186263993 24.999996564948102 0.9107450572256328 0.7340038539997817 0.11640771980702302 0.15220079379082702 16.722398589602143 574421.445337343 0.017906585959120987 0.025546419669706593 1.72915057623124e-08 7.762167186263993 -0.17674120322585107 QSVTSFPDADAFHHQVHDDDLLS(ph)SSEEECKDR ddPTM_A549_MK2206_60min_R1 1 QSVTSFPDADAFHHQVHDDDLLSSSEEECKDR 32 1 P50402;Q5HY57 P50402 EMD Emerin 1 QSVTSFPDADAFHHQVHDDDLLS(0.727)S(0.136)S(0.136)EEECKDR 198.52 2.0885999999999996e-87 20906000.0 696.87 1504.8 1056.9 825.06 1404.3 1236.9 907.65 1249.8 1523.8 1746.7 2060.2 True False 814.4846191642742 1581.3878924795256 1206.784312486194 1027.1997370383503 1197.7293302649612 1367.7879370122296 1072.5582561880994 1426.9629773519762 1178.6617330085792 1352.1192568641648 1548.595481372594 0.5259505332163037 1.0211755823269393 0.7792766587543983 0.6633105606945814 0.773429436332435 0.8832441741337731 0.6926006623998671 0.9214562450403064 0.7611166035199038 0.8731261799018792 1.0 10.596744622312071 -11.508054933877068 0.4235302823787202 1.1432655226884996 0.7757755822883405 0.15024622743501015 0.13128082464595953 3.4561512973653588 0.503732131585995 0.6080477786707255 0.030685396099352967 3.104166917449402e-12 11.508054933877068 -0.36748994040015903 QSVTSFPDADAFHHQVHDDDLLS(ph)SSEEECKDR ddPTM_A549_PD325901_60min_R1 3 QSVTSFPDADAFHHQVHDDDLLSSSEEECKDR 32 1 P50402;Q5HY57 P50402 EMD Emerin 1 QSVTSFPDADAFHHQVHDDDLLS(0.897)S(0.087)S(0.015)EEECKDR;QSVTSFPDADAFHHQVHDDDLLS(0.788)S(0.174)S(0.039)EEECKDR;QSVTSFPDADAFHHQVHDDDLLS(0.894)S(0.091)S(0.015)EEECKDR 348.63 1.559999999999999e-285 119462600.0 3220.77 4591.16 4256.3 5601.6900000000005 5674.950000000001 5316.75 5051.52 6545.75 4372.91 6878.780000000001 7828.950000000001 True False 3547.7401993944413 4978.073165877418 4545.158113211118 5947.693668938966 5276.361089514677 5273.452150762846 5243.75835789781 6415.1898812084655 4189.131799904152 6444.45265686006 6866.0387818030285 0.516708441670468 0.7250284078019978 0.6619767609319496 0.8662481902522979 0.7684723691771952 0.7680486985798866 0.7637239643614122 0.9343363888666866 0.6101235272667775 0.938598347847919 1.0 12.74526229082951 -10.990380051075773 1.2120291251325597 1.002836221105021 0.7313326083919115 0.40349767577224305 0.1093288087243501 0.35989083053639703 0.9242298656437665 0.08257206747703061 0.018081471780433723 1.0223979003474882e-11 10.990380051075773 -0.2715036127131095 QSVVYGGKS(ph)TIR ddPTM_A549_MK2206_60min_R1 3 QSVVYGGKSTIR 12 1 E7EVX8;Q8WWY3 E7EVX8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 1 QSVVYGGKS(0.855)T(0.145)IR;QSVVYGGKS(0.768)T(0.232)IR;QSVVYGGKS(0.946)T(0.054)IR 85.56299999999999 0.00010751 66570900.0 11824.9 13402.3 13118.5 12320.999999999998 16097.3 12801.9 13129.099999999999 11889.199999999999 16774.7 17517.2 17334.3 True False 13820.65402895177 14084.419824148292 14978.900561406123 15339.645553110713 13729.408493964365 14156.588560786546 15514.487524176919 13574.530509147955 12975.257233691442 13560.052353776233 13029.714907657979 1.0607027188928693 1.0809461238380917 1.1495954184387063 1.1772817488197775 1.0536998385049203 1.0864849047822425 1.190700459229431 1.0418133171255934 0.9958205014958131 1.0407021527237375 1.0 13.669517897391977 -8.493770167143639 6.382442733216172 0.9989192586083531 1.1137321284915096 0.5185946146112597 0.04396020139494322 0.09180426346912529 12.680948449257318 0.006928374479127234 0.008245974891455779 3.2079665624192415e-09 8.493770167143639 0.11481286988315653 QSVVYGGKS(ph)TIR ddPTM_A549_PD325901_60min_R1 4 QSVVYGGKSTIR 12 1 E7EVX8;Q8WWY3 E7EVX8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 1 QSVVYGGKS(0.908)T(0.092)IR;QSVVYGGKS(0.956)T(0.044)IR;QSVVYGGKS(0.728)T(0.272)IR;QSVVYGGKS(0.948)T(0.052)IR 115.31 7.424500000000001e-06 171383500.0 19782.0 19281.8 21204.500000000004 19809.1 26678.100000000002 19936.3 22767.3 21873.4 23474.3 21638.600000000002 22734.199999999997 True False 21790.254077261296 20906.744955482976 22643.564883016992 21032.663117269774 24804.322290448647 19773.945382659207 23633.722060244603 21437.11787764964 22487.756805077177 20272.33510313343 19938.037523967632 1.092898639149771 1.0485858966987527 1.1356967733558043 1.054901370909062 1.2440703986353334 0.991769895050545 1.1853584903646794 1.075186956182621 1.127882158815506 1.0167668246568369 1.0 14.283235793609851 -10.800700519404963 0.9075986465593444 0.9959769200710096 1.1073269720668903 0.24836992588166606 0.06541032197174845 0.6244071806584983 0.8578545509063579 0.04813910180347904 0.010405314522945306 1.582338811631645e-11 10.800700519404963 0.11135005199588077 QSVVYGGKS(ph)TIRDR ddPTM_A549_MK2206_60min_R1 1 QSVVYGGKSTIRDR 14 2 E7EVX8;Q8WWY3 E7EVX8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 1 QSVVYGGKS(0.5)T(0.5)IRDR 71.558 0.00037603 19680000.0 2233.3 3402.2 3121.0 1967.0 3367.5 2790.6 2249.6 2098.0 4369.4 5058.4 4844.3 True False 2610.226441057262 3575.357448028872 3563.6047301252843 2448.9150883019856 2872.145210900276 3085.8994397496385 2658.323200705943 2395.397924855534 3379.737876498021 3915.7039267886253 3641.3266141215704 0.7168339228166024 0.9818832054677927 0.978655613123286 0.6725337625042348 0.7887634137958672 0.8474657087288165 0.7300425043984234 0.6578366015193056 0.9281611441805104 1.0753509206240883 1.0 11.830248435892235 -8.957949369485794 11.424772111947352 0.9683671700169566 0.8033089706898564 0.41005321841816467 0.10802113386745049 0.5475074657764731 147.0542807399988 0.018628903210566934 0.019695113138165344 1.1016677356556326e-09 8.957949369485794 -0.1650581993271002 QSVVYGGKS(ph)TIRDR ddPTM_A549_PD325901_60min_R1 1 QSVVYGGKSTIRDR 14 2 E7EVX8;Q8WWY3 E7EVX8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 1 QSVVYGGKS(0.5)T(0.5)IRDR 68.243 0.001108 67394000.0 2912.1 3016.9 3334.4 3230.5 3621.2 3713.5 3657.3 3939.1 3609.7 3943.7 3767.9 True False 3207.7342482252843 3271.1447508114725 3560.692435376067 3430.040648002178 3366.859404461811 3683.258487207002 3796.480552851353 3860.5315603358304 3457.9968620698833 3694.6941089639467 3304.472186686034 0.9707251467116249 0.989914445033358 1.0775374202640784 1.0379995515840832 1.0188796316782873 1.1146283821201843 1.1488916651039331 1.1682747931394917 1.0464596663886025 1.1180890321456316 1.0 11.69020413749603 -5.643715734058056 5.683609293033985 1.05032348251641 0.97569729292967 0.18188170120182634 0.0578788814958642 0.28115139882907736 12.561991731054054 0.008890538057140386 0.03584667756669233 2.2713510703708295e-06 5.643715734058056 -0.07462618958674005 QSVVYGGKST(ph)IR ddPTM_A549_MK2206_60min_R1 1 QSVVYGGKSTIR 12 1 E7EVX8;Q8WWY3 E7EVX8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 1 QSVVYGGKS(0.38)T(0.62)IR 94.569 0.00010352 65916000.0 6108.3 5959.9 6820.9 6304.7 8034.5 5501.6 6253.2 6021.3 7876.4 8378.2 8236.3 True False 7139.231706403105 6263.233453208884 7788.206185104629 7849.3517830287365 6852.635693237793 6083.775660333482 7389.325497268135 6874.837714457879 6092.407976026235 6485.558801087388 6190.99939968406 1.1531630429115265 1.0116675917507778 1.2579885220958151 1.2678650531656175 1.1068706764189797 0.9826807059041146 1.1935593948927257 1.1104568536719155 0.9840750390538147 1.0475786512624052 1.0 12.59595660405092 -8.700049721996995 4.721353266057716 0.9923294909369905 1.1372496910665335 0.29823978117453886 0.08475736393069525 0.15985945149748895 7.1149953449712 0.014459404984787287 0.016239233202640903 1.995033892200373e-09 8.700049721996995 0.144920200129543 QSVVYGGKST(ph)IRDR ddPTM_A549_PD325901_60min_R1 1 QSVVYGGKSTIRDR 14 2 E7EVX8;Q8WWY3 E7EVX8 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 1 QSVVYGGKS(0.43)T(0.57)IRDR 71.558 0.00063235 24293000.0 2686.8 3559.1 3459.4 3609.2 4142.2 3948.5 3542.2 3735.0 4510.7 4108.6 4607.2 True False 2959.5619580823786 3859.0378476625383 3694.1756870621307 3832.132086912075 3851.266161814238 3916.3447251210027 3677.000359366216 3660.502494949182 4321.130965381783 3849.1822948219383 4040.5436074470945 0.7324662831574527 0.9550788761566577 0.9142769008242911 0.9484199303898372 0.9531554503497993 0.9692618384077871 0.9100261540524313 0.9059430736504214 1.069442972331134 0.9526397110843057 1.0 11.980333688285024 -2.839910252498059 0.27327936900366023 1.027976342305739 3.0158613605168583e-16 0.4056576895106089 0.06041586195377065 16.984694424229506 0.3174996103201657 0.02494330484779558 7.677442600766256 0.001445738503561648 2.839910252498059 -1.0279763423057389 QSWPS(ph)PAVK ddPTM_A549_PD325901_60min_R1 1 QSWPSPAVK 9 0 Q86XL3;Q86XL3-3;F5H1D4 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 QS(0.004)WPS(0.996)PAVK 84.71799999999999 0.0011290999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QT(ph)LQKPK ddPTM_A549_PD325901_60min_R1 2 QTLQKPK 7 1 H0YIY9 H0YIY9 TEP1 1 QT(1)LQKPK;QT(1)LQKPK 51.727 0.019425 90987000.0 5706.1 5751.9 6122.799999999999 5585.6 7907.6 6876.8 6301.1 6071.9 7410.200000000001 7056.700000000001 7023.4 True False 6285.379071391198 6236.6327992948045 6538.330027387412 5930.609826182008 7352.1974557390395 6820.797620795771 6540.891808594224 5950.791191186598 7098.775063664649 6611.138757696043 6159.566325000847 1.0204255851389559 1.0125116721255447 1.0614919431663905 0.9628291203084322 1.1936225811706034 1.107350300476687 1.0619078460192284 0.966105546592321 1.1524796859239392 1.0733123744219337 1.0 12.58861306369988 QT(ph)PDSGKPLK ddPTM_A549_MK2206_60min_R1 2 QTPDSGKPLK 10 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 QT(0.938)PDS(0.062)GKPLK;QT(0.672)PDS(0.328)GKPLK 61.211999999999996 0.0030215999999999997 22945000.0 7698.7 8131.4 7810.900000000001 6956.3 10659.2 8299.1 8808.5 9202.5 11795.900000000001 10227.2 11314.5 True False 8998.052344856274 8545.253527982473 8918.603071623054 8660.593812280173 9091.245800156858 9177.30525350327 10408.890430929181 10506.98255647428 9124.147484181585 7916.868416901123 8504.797385685968 1.0579972616397049 1.0047568613879732 1.0486555607583954 1.0183186523474879 1.0689550130209937 1.079073943483847 1.2238845864156511 1.2354183268560985 1.072823615943869 0.9308709023716002 1.0 13.054061150868446 -3.9465471293786782 13.878348216175727 1.061780421308701 1.056665271605698 0.0 0.08695959564667188 0.0 0.0 0.011440487284542597 0.0 0.00011309746499781809 3.9465471293786782 -0.005115149703003086 QT(ph)PKKPEAK ddPTM_A549_MK2206_60min_R1 2 QTPKKPEAK 9 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 QT(1)PKKPEAK;QT(1)PKKPEAK 44.61600000000001 0.019181999999999998 25626000.0 5655.0 7327.5 7152.1 5972.4 7529.4 6267.7 5093.0 4295.0 7493.799999999999 11338.3 10518.9 True False 6609.425748524072 7700.438451716994 8166.375325321699 7435.63826811122 6421.835234135866 6930.943853837457 6018.33217514019 4903.829402885853 5796.466265139583 8776.970155208652 7906.766823128908 0.8359201550234353 0.9739048367016008 1.03283371168015 0.9404145125869223 0.8121948424418798 0.8765838185037949 0.761162218359006 0.6202066549554933 0.7331019612446057 1.1100580492059309 1.0 12.948872163710044 -6.699167939597561 6.3978732844433575 0.8397379896483181 0.9553264676179197 0.11991581511232663 0.13050521178972968 0.33152505048995934 25.824079366451716 0.019149157572369704 0.03995465787333568 1.999088682122952e-07 6.699167939597561 0.11558847796960159 QT(ph)PKKPEAK ddPTM_A549_PD325901_60min_R1 1 QTPKKPEAK 9 2 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 QT(1)PKKPEAK 43.382 0.023591 22132000.0 4233.1 4510.7 4617.7 4383.7 5142.6 4662.3 5267.9 5812.6 5053.6 4933.3 5119.7 True False 4662.841195756485 4890.832519303024 4931.084890485864 4654.471192894953 4781.401517006878 4624.331774580642 5468.372817205492 5696.663133103514 4841.2147663673895 4621.8105960777575 4490.009356452264 1.0384925343319957 1.08927000614704 1.0982348808248612 1.0366283950402804 1.064897896066937 1.0299158437020521 1.2178978668156433 1.2687419292160842 1.0782193046904087 1.029354335183309 1.0 12.132502735974438 -9.919004903361671 1.2860156706524077 1.0138172009115998 1.1026391333320642 0.1763512298137505 0.0723456138413559 0.4849984659469199 1.6131307935809271 0.022919994653210308 0.014359567433136744 1.2050223351017963e-10 9.919004903361671 0.08882193242046443 QT(ph)PSRQPPLPHR ddPTM_A549_MK2206_60min_R1 3 QTPSRQPPLPHR 12 1 Q07666-3;Q07666 Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 1 QT(0.892)PS(0.108)RQPPLPHR;QT(0.963)PS(0.037)RQPPLPHR;QT(0.876)PS(0.124)RQPPLPHR 108.71 6.1874e-05 60435000.0 1715.9499999999998 1700.89 1821.49 1533.68 2270.4700000000003 1850.46 1411.29 1547.22 2883.7 2719.36 3176.95 True False 2005.5604090503773 1787.458035911417 2079.8046715398596 1909.431668849511 1936.4868706734217 2046.274448964065 1667.7031249663453 1766.5431731625256 2230.5465543226405 2105.054687322457 2388.0256356405525 0.839840401676599 0.7485087300714667 0.870930630098526 0.7995859174842292 0.8109154448645556 0.8568896490992577 0.698360645747008 0.7397505063586457 0.934054693983354 0.8815042250406191 1.0 11.221602608791178 -8.89835176929137 4.65470329414555 0.9718027971186126 0.7962808070508656 0.5415003509120335 0.0570369623665623 0.08524826306407483 3.067003527662335 0.009356949442546619 0.00985524047561358 1.2637123526980666e-09 8.89835176929137 -0.17552199006774705 QT(ph)PSRQPPLPHR ddPTM_A549_PD325901_60min_R1 3 QTPSRQPPLPHR 12 1 Q07666-3;Q07666 Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 1 QT(0.881)PS(0.119)RQPPLPHR;QT(0.752)PS(0.248)RQPPLPHR;QT(0.942)PS(0.058)RQPPLPHR 137.79 7.865e-09 68495000.0 5092.78 5207.6900000000005 5258.95 5251.65 5962.42 5510.0 5387.38 6541.620000000001 6706.7300000000005 5972.540000000001 6959.3099999999995 True False 5609.79527649352 5646.560312689643 5615.85397163537 5576.032493137484 5543.640188432344 5465.128386834676 5592.399693987457 6411.142257298387 6424.869461381821 5595.432805119946 6103.358988700865 0.9191324460643593 0.9251561841836778 0.9201251281518895 0.913600609674178 0.9082933182687227 0.8954296145699863 0.9162822806819416 1.0504285048884263 1.0526776277253505 0.9167792383634584 1.0 12.575387734320788 -8.253417955097525 24.695542974811275 1.027487070552253 0.9137178253753702 0.563522587823057 0.036611373507228956 129.09081975118377 397431.587120939 0.0034888259430001316 0.004462186087994066 5.579329943035038e-09 8.253417955097525 -0.1137692451768828 QT(ph)SKGEDVGYVASEITMSDEER ddPTM_A549_PD325901_60min_R1 1 QTSKGEDVGYVASEITMSDEER 22 1 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 QT(0.499)S(0.499)KGEDVGY(0.001)VASEITMSDEER 65.581 0.00039382 3030000.0 1338.1 1317.9 1150.2 1163.0 1524.4 1442.0 1221.7 1068.9 1365.0 1538.5 1098.6 True False 1473.9429269428442 1428.964058170453 1228.2594887144767 1234.835868635361 1417.331402894506 1430.2568300935761 1268.192462039892 1047.579950964172 1307.6337969153647 1441.3588474379474 963.4791645991876 1.5298129747891458 1.4831291746354573 1.274816865630342 1.2816425243083065 1.4710555816576723 1.4844709492898795 1.3162635048444111 1.0872886404346593 1.3571998699726395 1.4959937904184573 1.0 9.912109658107406 -14.014349027619252 0.16624502729820217 1.649845791711093e-10 1.4755681402214071 0.0 0.18165298517718176 20.04041601015437 0.28465858106246933 6.855488924014512 0.17443967542959607 9.674999970811984e-15 14.014349027619252 1.4755681400564227 QT(ph)SNRSEPSGEINIDSSGETVGSGER ddPTM_A549_PD325901_60min_R1 2 QTSNRSEPSGEINIDSSGETVGSGER 26 1 P42695;E9PKK4;G3V1A9 P42695 NCAPD3 Condensin-2 complex subunit D3 1 QT(0.497)S(0.497)NRS(0.006)EPSGEINIDSSGETVGSGER;QT(0.566)S(0.431)NRS(0.002)EPSGEINIDSSGETVGSGER 88.544 7.6105e-09 10958300.0 1163.5500000000002 1518.92 1255.23 1603.4099999999999 1899.9099999999999 1428.68 1403.78 1330.9299999999998 1208.44 1300.6599999999999 1509.9 True False 1281.6727394397622 1646.9247190502042 1340.4174561111752 1702.4489940916817 1766.4668759336798 1417.0453037573452 1457.2016160778903 1304.383557055614 1157.6534692632993 1218.5361056279758 1324.1918720447045 0.9678905047655307 1.2437206071255844 1.0122531971453779 1.2856512942213614 1.3339961626603642 1.0701208289167825 1.1004459752707918 0.9850412048229051 0.8742339336940267 0.9202111350724543 1.0 10.37089646480697 -8.113274238172389 1.8921882242247208 0.9404119474820933 1.1655643478436193 0.4528997329369907 0.10785678916847301 0.22378870145362023 1.5795818437663105 0.018517510329394075 0.025083474639606126 7.704168305442569e-09 8.113274238172389 0.22515240036152595 QT(ph)TWAGR ddPTM_A549_MK2206_60min_R1 1 QTTWAGR 7 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 QT(0.776)T(0.224)WAGR 96.027 0.012527 8293300.0 1901.9 1920.3 1484.3 1469.8 2593.4 2137.7 1801.5 1823.9 2931.5 3302.4 3127.4 True False 2222.8942230093594 2018.035067735537 1694.7960592518275 1829.90106598183 2211.914295456207 2363.9099951095836 2128.809231006294 2082.4434104594898 2267.5199306435557 2556.3855463835916 2350.7802681509825 0.9455984692086035 0.858453295306427 0.7209504359949718 0.7784228457137542 0.9409277104388829 1.005585263385305 0.9055755911549823 0.8858520035551624 0.9645818290056877 1.0874625676496463 1.0 11.198923978538595 -6.867614275714834 5.5015271360590114 0.9697267478272702 0.8212600395570117 0.48749616549084573 0.07146301354406948 0.12568029889438315 5.684094493758436 0.009512278652594908 0.018253047526495668 1.3563935760978904e-07 6.867614275714834 -0.14846670827025854 QTAEETGLT(ph)PLETSR ddPTM_A549_MK2206_60min_R1 2 QTAEETGLTPLETSR 15 0 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 QTAEETGLT(1)PLETSR;QTAEET(0.001)GLT(0.998)PLETSR 152.71 2.0741999999999998e-14 17786000.0 1644.35 2028.96 1500.1599999999999 1672.76 2701.2 1986.25 1625.56 1958.36 2383.1000000000004 2106.3 2312.5 True False 1921.876079502308 2132.2253976111515 1712.9052457368612 2082.5862750930496 2303.8570582580037 2196.4336566339575 1920.9032104105406 2235.9635272259693 1843.331655028708 1630.4853671111196 1738.2424282468319 1.1056432913334686 1.2266559387586031 0.9854236773316335 1.1980988619599617 1.325394559941586 1.2635945486897655 1.10508360582818 1.2863358360669703 1.0604571750603669 0.938008036517441 1.0 10.763413589851782 -8.923383623125334 6.608187241908114 1.0263024488497994 1.1863867354504347 0.43286710497573244 0.09492754968459975 0.1617961686034988 11.10261681701215 0.016083123317136322 0.017007085578023464 1.1929338907287313e-09 8.923383623125334 0.16008428660063534 QTAEETGLT(ph)PLETSR ddPTM_A549_PD325901_60min_R1 2 QTAEETGLTPLETSR 15 0 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 QTAEETGLT(0.999)PLET(0.001)SR;QTAEET(0.003)GLT(0.997)PLETSR 125.52 1.5093e-07 24553000.0 1178.72 1406.3600000000001 1392.2 1005.15 1374.3 1188.43 1152.77 1318.23 1118.12 1052.1100000000001 1521.5900000000001 True False 1298.3827866721986 1524.8788928208487 1486.6830639786942 1067.235832638722 1277.7739090776174 1178.7518201027115 1196.639293169948 1291.9368685185705 1071.1293047670385 985.6795950457844 1334.4440761537212 0.9729765449703502 1.1427072292276341 1.1140842022123345 0.7997606281971924 0.9575327523357556 0.883328002399499 0.8967324405373591 0.9681461303663847 0.8026783017047542 0.7386443633417868 1.0 10.382023130984035 -6.246023248703441 24.944687777612327 0.9048294389414604 1.0832011320619377 0.4899153933110686 0.08639652381382429 525.8789839182018 850918.1552887156 0.01151737209612846 0.03035265027582784 5.675142243569627e-07 6.246023248703441 0.1783716931204773 QTAGQGS(ph)PCEEQEEPR ddPTM_A549_MK2206_60min_R1 3 QTAGQGSPCEEQEEPR 16 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 QT(0.001)AGQGS(0.999)PCEEQEEPR;QTAGQGS(1)PCEEQEEPR;QTAGQGS(1)PCEEQEEPR 127.75 5.8216e-10 14105600.0 759.19 675.99 855.6700000000001 839.45 992.4 1057.2 1069.29 903.22 1128.02 837.1500000000001 1405.21 True False 887.3227115865586 710.3950036132613 977.0168726133616 1045.1152876843428 846.4192746243303 1169.0722022874356 1263.5661518860502 1031.2542009952408 872.5252710777906 648.0372335740742 1056.257575176965 0.8400628146386518 0.6725584935987248 0.9249797545354148 0.989451164418153 0.8013379449444625 1.1068059815727898 1.196267067409531 0.9763283362227863 0.8260535039775767 0.6135219749458386 1.0 10.044745972689858 -5.858022600669612 6.773333737993043 0.9494264203735332 0.7576601606909539 0.17105728929558484 0.1521972788448264 0.20393821048278557 12.053041099860675 0.017392297988211472 0.05515044075417122 1.3866836640249178e-06 5.858022600669612 -0.19176625968257932 QTAGQGS(ph)PCEEQEEPR ddPTM_A549_PD325901_60min_R1 3 QTAGQGSPCEEQEEPR 16 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 QT(0.001)AGQGS(0.999)PCEEQEEPR;QTAGQGS(1)PCEEQEEPR;QTAGQGS(1)PCEEQEEPR 133.71 3.1118e-10 10803500.0 1552.47 1283.4 1592.05 1031.29 1444.12 1041.53 1786.78 1093.72 576.22 1326.79 1206.46 True False 1710.0756115319916 1391.5566220926912 1700.096086774372 1094.990441070474 1342.6899931435403 1033.0481249981706 1854.7768906635326 1071.9048965932589 552.0034772590268 1243.0162529686015 1058.0730683800612 1.616216934951538 1.3151800794090738 1.6067851432767926 1.0348911372887832 1.2689955290131667 0.976348567854388 1.752976184814199 1.013072658804533 0.5217063865959269 1.174792450649645 1.0 10.047223545147665 -8.516954734982644 24.16434552041832 0.7737838474077914 1.3458010942440333 0.3547937974539739 0.27345442714469176 106.19501742265676 433176.3853192892 0.04448177200227971 0.05127836700446771 3.0412019831616257e-09 8.516954734982644 0.5720172468362419 QTAGQGS(ph)PCEEQEEPRAPVAPTPPTLIK ddPTM_A549_MK2206_60min_R1 1 QTAGQGSPCEEQEEPRAPVAPTPPTLIK 28 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 QT(0.03)AGQGS(0.97)PCEEQEEPRAPVAPTPPTLIK 62.302 0.00020501 3211900.0 767.18 1256.4 934.84 1188.9 1092.8 1252.1 1271.5 1326.0 1738.4 1613.5 1698.8 True False 896.6612282498132 1320.3453934817092 1067.4143690837295 1480.1805533717486 932.0505676234064 1384.5963909232867 1502.5150914374146 1513.964560704689 1344.6551756543608 1249.0092293755827 1276.9410755051767 0.702194678713018 1.033990854244673 0.8359151330937057 1.159161203101065 0.7299088309573514 1.0843071912112467 1.1766518598698827 1.1856181853228758 1.0530283671252374 0.9781259709900523 1.0 10.318476238020786 QTAGQGS(ph)PCEEQEEPRAPVAPTPPTLIK ddPTM_A549_PD325901_60min_R1 2 QTAGQGSPCEEQEEPRAPVAPTPPTLIK 28 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 QTAGQGS(1)PCEEQEEPRAPVAPTPPTLIK;QTAGQGS(1)PCEEQEEPRAPVAPTPPTLIK 119.89 4.8378e-21 17230600.0 2915.7 2937.4 3274.2 3471.2 3344.6000000000004 3489.3999999999996 4050.7 3914.6 3368.6 4579.0 3954.3 True False 3211.6997175751067 3184.945006806195 3496.4069013640583 3685.608140332819 3109.686834243612 3460.9834833068835 4204.851605128089 3836.5202320557096 3227.0294566220523 4289.8811585429685 3467.9461683729915 0.9261100264084825 0.9183951688328634 1.0082067978017142 1.0627639419391406 0.8966940901803389 0.9979922741795688 1.212490448518358 1.106280214798039 0.9305304350026959 1.2370091547746236 1.0 11.759865788981902 -5.758458804223541 24.536196965952133 0.9979842030224894 0.9222525624886138 0.01643973398675669 0.11037881989699283 111.80519487420095 920316.7656182561 0.012585282292890628 0.04485074200973292 1.743978777832686e-06 5.758458804223541 -0.0757316405338756 QTDAQSASS(ph)PK ddPTM_A549_MK2206_60min_R1 2 QTDAQSASSPK 11 0 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8;F5H4Q7 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 QTDAQSAS(0.123)S(0.877)PK;QTDAQSAS(0.06)S(0.94)PK 118.37 1.5762e-05 19873900.0 5999.0 5835.9 5336.5 3966.7 6468.7 4871.799999999999 4544.2 4924.0 6175.9 8642.1 7767.9 True False 7011.484538531547 6132.922382855704 6093.295944349113 4938.541678071931 5517.162799035077 5387.33064236089 5369.822318922448 5621.992079117564 4777.068510885739 6689.843607800877 5838.91604686641 1.2008195497680467 1.0503528966043414 1.043566287893319 0.8457976854663484 0.9448950378377148 0.9226593770349081 0.9196608198886996 0.9628485893601324 0.8181430376018959 1.1457338235563665 1.0 12.511484852576139 -5.516588273119895 1.225254092889556 0.915600982307428 1.249147748441925 0.3831421242671019 0.0878994965330036 0.4979270353846054 0.845761827674951 0.010249311057543039 0.18569402343299501 3.043769261653242e-06 5.516588273119895 0.3335467661344971 QTDAQSASS(ph)PK ddPTM_A549_PD325901_60min_R1 2 QTDAQSASSPK 11 0 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8;F5H4Q7 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 QTDAQS(0.02)AS(0.376)S(0.604)PK;QTDAQSAS(0.093)S(0.907)PK 133.15 7.7132e-14 10613000.0 3619.4 3560.9 3568.5 2849.5 3446.9 3060.8 3304.8 3293.1 3263.9 4071.2 4259.3 True False 3986.8388235385473 3860.989539979638 3810.6798691337276 3025.507143315959 3204.8016351594542 3035.8738596050057 3430.5659724559496 3227.416537113028 3126.7296335179913 3814.1437372046616 3735.433101927287 1.067302964542866 1.0336122839377233 1.0201440542912192 0.8099481534697962 0.8579464677083749 0.8127233915763755 0.9183850650908345 0.8640006256430749 0.8370460795843896 1.0210713545470174 1.0 11.867059809544966 -6.106687589268649 6.4804198527495736 0.8984742360216555 1.0448453909251667 0.5049412798498021 0.06620247302702575 0.17319397893349295 9.034042518761472 0.01039552169032801 0.027954130604222128 7.821902726238354e-07 6.106687589268649 0.14637115490351116 QTDFEHR ddPTM_A549_MK2206_60min_R1 1 QTDFEHR 7 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 75.738 0.047393 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QTDLELS(ph)PLTKEEK ddPTM_A549_MK2206_60min_R1 3 QTDLELSPLTKEEK 14 1 J3KTC5;Q8WVK7 J3KTC5 SKA2 Spindle and kinetochore-associated protein 2 1 QTDLELS(0.954)PLT(0.046)KEEK;QTDLELS(0.992)PLT(0.008)KEEK;QT(0.002)DLELS(0.956)PLT(0.042)KEEK 143.15 1.5406e-13 15601300.0 7714.0 8045.9 7691.5 5972.1 9616.0 6911.2 6312.300000000001 6287.2 10655.0 9666.3 9969.300000000001 True False 9015.934610807193 8455.401943182498 8782.270356218714 7435.264768097761 8201.499138238178 7642.53859671673 7459.163202265345 7178.429853742476 8241.659512538658 7482.676116463088 7493.647671317257 1.203143649963242 1.1283426061711521 1.1719620058778317 0.9922090141169883 1.0944602012222029 1.0198689519350328 0.9953981731508534 0.9579353298419258 1.0998194569627948 0.998535885948286 1.0 12.871452432759778 -6.251182029013218 24.747334249940153 1.036500498069609 1.1638687530957774 0.6632964593116814 0.04583822867858036 352.48039275949156 850407.1079810116 0.007062486074704853 0.01845213400536866 5.608128691773977e-07 6.251182029013218 0.12736825502616833 QTDLELS(ph)PLTKEEK ddPTM_A549_PD325901_60min_R1 1 QTDLELSPLTKEEK 14 1 J3KTC5;Q8WVK7 J3KTC5 SKA2 Spindle and kinetochore-associated protein 2 1 QTDLELS(1)PLTKEEK 191.95 3.1525e-27 18915000.0 5728.9 6539.4 6623.1 5788.4 9001.8 6994.1 6928.6 7650.4 7425.4 8779.5 8590.6 True False 6310.493710606721 7090.498188026299 7072.583393935707 6145.936321589786 8369.544622524112 6937.142368486462 7192.271664475399 7497.806770377299 7113.33626052407 8225.160871681157 7534.010660300181 0.8376008470308282 0.9411319558371569 0.9387540996197516 0.8157589096568799 1.1109016166683576 0.9207768187853961 0.954640494786456 0.9951946059601885 0.9441632858322303 1.0917373551145781 1.0 12.879202359300104 -2.752687985298948 0.38787550625584366 0.977030732555953 6.4841906804887945e-09 0.26009116610000804 0.07398143122433282 34.38302940609751 0.7165702751094327 0.014177074632849914 23.637347616377593 0.0017673070694886933 2.752687985298948 -0.9770307260717623 QTDPST(ph)PQQESSKPLGGIQPSSQTIQPK ddPTM_A549_MK2206_60min_R1 2 QTDPSTPQQESSKPLGGIQPSSQTIQPK 28 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61 Q14004 CDK13 Cyclin-dependent kinase 13 1 QTDPS(0.019)T(0.98)PQQESSKPLGGIQPSSQTIQPK;QTDPS(0.176)T(0.818)PQQES(0.003)S(0.003)KPLGGIQPSSQTIQPK 225.73 2.0618999999999997e-104 109605000.0 2544.95 3825.9 3453.7999999999997 3135.2000000000003 4430.6 3730.2 3525.0 3259.0 5226.9 4897.2 5375.3 True False 2974.4753419462995 4020.621968259847 3943.6007744013773 3903.3241407444766 3778.8646091803303 4124.927288093638 4165.446871660942 3720.9732302689154 4043.0154956441415 3790.919118746889 4040.4646592671143 0.7361716022250345 0.9950890076561476 0.97602654817347 0.966058230899732 0.935254958984288 1.0209041870055222 1.0309326334799567 0.9209270576676322 1.0006313225314758 0.9382384053408627 1.0 11.980305499191784 -5.2608226940417255 24.97270105741318 0.9905788348442408 0.7361715231151801 0.7847774272027142 0.03595813241384246 13.949020723579594 564732.1381648036 0.004338254262882158 0.035867597501402344 5.4850085130108825e-06 5.2608226940417255 -0.2544073117290607 QTDPST(ph)PQQESSKPLGGIQPSSQTIQPK ddPTM_A549_PD325901_60min_R1 2 QTDPSTPQQESSKPLGGIQPSSQTIQPK 28 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61 Q14004 CDK13 Cyclin-dependent kinase 13 1 QTDPS(0.027)T(0.971)PQQES(0.001)SKPLGGIQPSSQTIQPK;QTDPS(0.019)T(0.968)PQQES(0.011)S(0.002)KPLGGIQPSSQTIQPK 252.96 3.459899999999999e-138 163251000.0 6696.8 7478.0 7513.5 5332.4 9103.099999999999 6406.6 7887.799999999999 7202.4 9004.900000000001 8307.8 7870.1 True False 7376.654206076403 8108.197304043278 8023.411292345869 5661.770237240926 8463.729659990144 6354.426773701459 8187.974545369781 7058.7424818265 8626.45536838328 7783.244090181978 6902.127592674368 1.0687507738781412 1.1747388316392444 1.1624547916010108 0.8202934763550436 1.2262493769273688 0.9206475377890411 1.1862971866906888 1.0226908133831598 1.2498255432917587 1.1276586799761266 1.0 12.752825428330782 QTELFAHFIQPS(ph)AQKSPTSPLNMK ddPTM_A549_MK2206_60min_R1 2 QTELFAHFIQPSAQKSPTSPLNMK 24 1 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 QTELFAHFIQPS(0.358)AQKS(0.306)PT(0.158)S(0.178)PLNMK;QTELFAHFIQPS(0.425)AQKS(0.425)PT(0.07)S(0.079)PLNMK 57.543 0.00075292 25779000.0 6716.7 8025.7 8065.7 6951.700000000001 11797.199999999999 8163.2 8645.8 8044.4 13349.4 10297.1 12248.900000000001 True False 7850.314752451216 8434.173849463676 9209.537543021948 8654.866812073671 10061.847507656337 9027.024405706388 10216.629946952104 9184.718334941774 10325.782214611314 7970.977958353459 9207.160077557897 0.8526315048639221 0.9160450973391517 1.0002582191950637 0.9400148079503451 1.0928285619994496 0.9804352623030219 1.1096396566249294 0.9975625771218181 1.1214948070447928 0.8657368712185656 1.0 13.168540514395126 -5.333901151848994 0.6329275974710123 1.0556584515818288 0.7341384820313807 0.24616160573531287 0.07623044752802315 1.5995539567985673 0.4571827510938393 0.009477463561244575 0.3644146316900608 4.635524151704487e-06 5.333901151848994 -0.32151996955044815 QTELFAHFIQPS(ph)AQKSPTSPLNMK ddPTM_A549_PD325901_60min_R1 1 QTELFAHFIQPSAQKSPTSPLNMK 24 1 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 QTELFAHFIQPS(0.449)AQKS(0.449)PT(0.085)S(0.017)PLNMK 76.16199999999999 8.955700000000001e-06 23751000.0 2989.3 2830.8 3303.2 2964.9 3715.8 3301.4 3230.5 3131.3 4283.1 3144.8 3784.8 True False 3292.7715353936505 3069.361450693465 3527.3750157552263 3148.035139223546 3454.8150268140935 3274.5144929756802 3353.4384452974286 3068.843765042671 4103.096201881466 2946.236791305075 3319.293593823964 0.9920097280699539 0.9247032128777236 1.0626884654971251 0.9484051501442748 1.0408283959099873 0.9865094485972552 1.0102867825663258 0.9245472502802127 1.2361353661260586 0.887609579576505 1.0 11.69666052710058 -8.742577803464078 24.979744922762155 1.111508391281834 0.9881118966396302 0.0 0.09370392252129267 225.4514636610311 298581.41103476856 0.015096161702149006 0.017103812327037414 1.808931812723792e-09 8.742577803464078 -0.12339649464220381 QTELFAHFIQPSAQKS(ph)PTSPLNMK ddPTM_A549_MK2206_60min_R1 2 QTELFAHFIQPSAQKSPTSPLNMK 24 1 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 QTELFAHFIQPS(0.084)AQKS(0.671)PT(0.107)S(0.138)PLNMK;QTELFAHFIQPS(0.295)AQKS(0.507)PT(0.086)S(0.112)PLNMK 109.45 1.8301e-11 10441100.0 2285.8999999999996 2610.8 2975.0 2515.7 3694.7 2513.4 2381.8 2522.61 3566.1 3338.1000000000004 4078.2 True False 2671.70403511073 2743.678568371577 3396.8997347397353 3132.0466129340657 3151.2145243394934 2779.366319740106 2814.5422294814257 2880.197692669122 2758.3840438915167 2584.020891588863 3065.4703874059373 0.8715478205521272 0.8950269360433565 1.1081169626349776 1.0217181108001068 1.0279709558721637 0.9066687876544982 0.9181436692536925 0.9395614142945296 0.899824071119381 0.8429443331780195 1.0 11.581892752871335 -7.262322671873222 24.987091999254528 0.9447429168288423 0.9887780189892464 0.12084095353588542 0.07199312670678551 174.29543368766497 4930561.758748238 0.010761244172473419 0.017833476696342325 5.466096922214083e-08 7.262322671873222 0.04403510216040418 QTELFAHFIQPSAQKS(ph)PTSPLNMK ddPTM_A549_PD325901_60min_R1 3 QTELFAHFIQPSAQKSPTSPLNMK 24 1 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 QTELFAHFIQPS(0.202)AQKS(0.664)PT(0.061)S(0.073)PLNMK;QTELFAHFIQPS(0.05)AQKS(0.907)PT(0.035)S(0.008)PLNMK;QTELFAHFIQPS(0.023)AQKS(0.949)PT(0.023)S(0.004)PLNMK 134.67 3.7204e-23 56707000.0 7255.4 7069.599999999999 8464.5 7182.4 10038.0 8025.5 8768.8 8595.8 9201.2 9453.5 9747.5 True False 7991.962866856822 7665.3800027633615 9038.951871173442 7626.040535586087 9332.965509220057 7960.142988846041 9102.501482471476 8424.35002572535 8814.505562034921 8856.604396655594 8548.619294493521 0.9348834696621404 0.8966804742025316 1.0573581019095986 0.8920786237958098 1.0917512159222909 0.9311612454157902 1.06479200545692 0.9854632351158489 1.0311028317418074 1.0360274673081367 1.0 13.061475710761274 -5.500890848149269 0.7188850355961932 1.0137202331134372 0.8746491909126319 0.21380182432768158 0.059251870219915466 2.141746723241634 0.9366141013342575 0.00828360211808562 0.2240810878725625 3.155797674835702e-06 5.500890848149269 -0.13907104220080524 QTENVS(ph)R ddPTM_A549_MK2206_60min_R1 2 QTENVSR 7 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 QTENVS(1)R;QTENVS(1)R 68.626 0.022628 29193000.0 2158.68 2722.5 2512.5 1347.92 1487.4099999999999 1392.17 1537.25 1435.68 1528.11 3914.6 3914.3999999999996 True False 2523.0124093411023 2861.0636212623 2868.8102801793566 1678.1604605104285 1268.613959360112 1539.488505352345 1816.5484265136956 1639.1920365856026 1181.995524890235 3030.289141192226 2942.346448055957 0.8574831189604087 0.9723748279719536 0.9750076446894327 0.5703476766371985 0.4311572351373851 0.5232179597237787 0.6173808756320693 0.5571036808628148 0.40171867785018767 1.0298886261998053 1.0 11.522751412106423 -3.4834440644436127 9.694548842690866 0.6969078579194329 0.9604893325750056 0.0 0.23578928394957918 0.0 0.0 0.03537309641605961 0.0 0.00032851555319186177 3.4834440644436127 0.2635814746555727 QTEPVS(ph)PVLK ddPTM_A549_PD325901_60min_R1 2 QTEPVSPVLK 10 0 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 QT(0.027)EPVS(0.973)PVLK;QTEPVS(1)PVLK 92.039 0.00062842 10974400.0 6400.1 6836.0 6040.2 6583.5 8486.1 6639.3 7562.7 7990.299999999999 7614.9 9718.1 9193.3 True False 7049.833440495401 7412.093710944091 6450.124294673262 6990.147842786674 7890.065611455694 6585.231742052898 7850.50268696823 7830.92719823091 7294.872234528069 9104.49750749868 8062.58238113026 0.8743890117631411 0.9193200590782702 0.8000072420679001 0.8669862225713785 0.9786027898358812 0.8167645836977782 0.9736958105806914 0.9712678677936343 0.9047811097845094 1.1292284626829894 1.0 12.97702628120049 -14.999999999753951 0.09465277288048105 1.3303329772779349 0.8184510136705291 0.4421859420055493 0.06683922880591144 93.19130023132576 0.6394750484297909 6.203827818648524 0.43390869392995984 1.0000000005665476e-15 14.999999999753951 -0.5118819636074058 QTES(ph)DPDADR ddPTM_A549_MK2206_60min_R1 1 QTESDPDADR 10 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QT(0.12)ES(0.88)DPDADR 47.288000000000004 0.033463 1927700.0 421.16 360.93 207.88 119.82 0.0 0.0 0.0 92.75200000000001 0.0 227.42 324.18 True False 492.2415116265957 379.29979534332494 237.36050986813316 149.17590537892423 0.0 0.0 0.0 105.89988004108699 0.0 176.04566404995037 243.67715908716033 2.020056017849941 1.5565668803929795 0.9740777952160556 0.61218665687729 0.0 0.0 0.0 0.43459091708799796 0.0 0.7224545160877429 1.0 7.928827217134609 -5.808488325979408 1.5650371692693381 0.399654368286892 2.0353733248753603 0.7550291031626366 0.32238519940226534 0.2450430207041793 1.012252110951866 0.06309897493384792 0.4469169135473518 1.5542170682266507e-06 5.808488325979408 1.6357189565884682 QTES(ph)DPDADR ddPTM_A549_PD325901_60min_R1 1 QTESDPDADR 10 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QT(0.046)ES(0.954)DPDADR 60.49 0.007984 4781200.0 260.73 268.6 214.84 110.16 360.17 245.29 173.98 247.94 216.36 224.5 199.65 True False 287.19911766071857 291.2358646517819 229.4203343378702 116.96433300848784 334.8729017190463 243.29243956564034 180.60090410550896 242.99464219483275 207.26714161216734 210.32503168659034 175.0943156856251 1.6402538057053389 1.663308506112125 1.3102671748052936 0.6680075966514679 1.9125286872264735 1.3894936486828176 1.0314492700595188 1.3877928660523737 1.1837456904329622 1.201209935702428 1.0 7.45198843822196 -2.0000000251903773 0.09541803202020617 0.8012983681289021 2.9608075304616723 0.16451849500996707 0.3047645767937953 128.06810575487623 0.8452604304410392 2.264871590644409 36.309066590956256 0.009999999419970143 2.0000000251903773 2.1595091623327702 QTETEMLYGSAPRT(ph)PSK ddPTM_A549_MK2206_60min_R1 4 QTETEMLYGSAPRTPSK 17 1 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 QTETEMLYGSAPRT(0.996)PS(0.004)K;QTETEMLYGS(0.021)APRT(0.958)PS(0.021)K;QTETEMLYGSAPRT(0.977)PS(0.023)K;QTETEMLYGSAPRT(0.978)PS(0.022)K 174.7 1.9452999999999998e-30 122988000.0 29271.1 32930.299999999996 31089.699999999997 30788.299999999996 30370.2 23253.3 22976.699999999997 21994.200000000004 36212.0 52794.0 51224.0 True False 34211.346070313535 34606.31161331641 35498.68695231526 38331.43488213931 25902.78381116067 25713.948771708714 27151.26897477785 25111.945204412572 28010.039818681365 40867.79873297458 38503.66708952033 0.8885217605578393 0.8987796287781462 0.9219560014837408 0.9955268622341715 0.6727355020740535 0.6678311629883006 0.7051605996813665 0.6521961959111 0.7274642114881819 1.0614001684036403 1.0 15.23270823418619 -6.737268966663543 24.998818118865685 0.8117944614500132 0.9239348543449735 0.19628233662987715 0.1309952878091318 420.49295290802104 434902.42989602167 0.021311854904150235 0.044346543969018506 1.8311799872381094e-07 6.737268966663543 0.11214039289496025 QTETEMLYGSAPRT(ph)PSK ddPTM_A549_PD325901_60min_R1 3 QTETEMLYGSAPRTPSK 17 1 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 QTETEMLYGS(0.013)APRT(0.891)PS(0.096)K;QTETEMLYGS(0.137)APRT(0.836)PS(0.027)K;QTETEMLYGSAPRT(0.996)PS(0.004)K 186.96 8.984500000000001e-40 151513000.0 37964.0 37778.0 38133.0 36952.0 43462.0 40867.0 43262.0 46755.0 47092.0 45177.0 45713.0 True False 41818.077332380315 40961.68464190255 40720.93469235711 39234.44111591907 40409.379055760306 40534.19270141068 44908.35908387474 45822.434846412034 45112.887006841294 42324.51651004494 40090.59079858241 1.0430895753688665 1.021728136851277 1.015722988392503 0.9786446229499414 1.007951697663412 1.0110649879184108 1.1201720450939996 1.1429723018208129 1.125273689118008 1.0557219453982585 1.0 15.290976057599487 -7.723889425153586 23.89947983617057 1.0724393569464508 1.011756891684475 0.4460174958893518 0.040204003466015374 128.16404677838435 81572.26221997828 0.008676819877429248 0.012869544829934874 1.888472107984444e-08 7.723889425153586 -0.06068246526197574 QTETEMLYGSAPRT(ph)PSKR ddPTM_A549_MK2206_60min_R1 1 QTETEMLYGSAPRTPSKR 18 2 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 QTETEMLY(0.134)GS(0.241)APRT(0.575)PS(0.05)KR 53.998000000000005 0.0061857 7659400.0 1608.0 1618.5 1618.4 1889.2 2090.3 1713.0 1397.3 1461.8 2584.3 2706.0 2313.0 True False 1879.391088174483 1700.87473682756 1847.9134556984156 2352.0540848094097 1782.8196390036667 1894.2685230026286 1651.1713230558391 1669.014626574746 1998.9601762790858 2094.712720601379 1738.6182644475355 1.0809682186167988 0.9782910783857611 1.062863248066481 1.3528295042711977 1.025423277472687 1.0895252636751476 0.9497031963945901 0.9599661183273565 1.149740697630527 1.2048146297755569 1.0 10.763725490196936 QTETEMLYGSAPRT(ph)PSKR ddPTM_A549_PD325901_60min_R1 2 QTETEMLYGSAPRTPSKR 18 2 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 QTETEMLYGS(0.057)APRT(0.853)PS(0.09)KR;QTETEMLYGS(0.049)APRT(0.881)PS(0.07)KR 84.689 3.348e-05 40105000.0 3529.7 4371.1 4465.6 4242.6 4868.5 4656.0 4239.3 4598.1 4526.799999999999 4664.6 4960.5 True False 3888.0325455721945 4739.467937376786 4768.662469834264 4504.655766356308 4526.553355413212 4618.083079691877 4400.6288813339725 4506.3872883603335 4336.554338371046 4370.076359934384 4350.3899472003195 0.8937204693740906 1.0894351988898963 1.096145984086581 1.0354602279400875 1.040493705242736 1.0615331351305257 1.011548145049844 1.0358582432961914 0.9968196853621873 1.0045252064695334 1.0 12.086929007388546 -8.561190471760485 1.5340468971558432 0.9980927259295369 1.0399075991653441 0.06080804755927449 0.050830417983032505 0.590344980221866 2.704077737995623 0.009020906929294623 0.010435354104918318 2.7466892529697462e-09 8.561190471760485 0.04181487323580724 QTETSVNASRS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 QTETSVNASRSPEK 14 1 H0YG46;J3KNE4;A0A0A0MTP3;Q99550-2;Q99550;U3KQJ0 H0YG46 MPHOSPH9 M-phase phosphoprotein 9 1 QTETSVNAS(0.097)RS(0.903)PEK;QTETSVNAS(0.042)RS(0.958)PEK 109.72 3.5205e-06 81623000.0 7975.3 9198.599999999999 8077.7 8111.200000000001 11038.5 8182.200000000001 8075.799999999999 8094.1 12746.4 12757.8 12903.900000000001 True False 9321.335662635549 9666.76944960272 9223.239323464588 10098.444364125604 9414.751272612533 9048.034973095211 9543.06832515161 9241.46346214164 9859.360751818196 9875.804119323084 9699.505500477542 0.9610114311679729 0.9966249773379466 0.9508978909296453 1.041129814672348 0.9706423974035594 0.932834665916705 0.9838716339386342 0.9527767638965358 1.0164807629969161 1.018176041947382 1.0 13.243695482457314 -8.776430198655085 24.95806246436094 1.0077825844567962 0.9748456685819838 0.27169214085884064 0.027349851271136965 244.29087852312153 406716.0789799751 0.004588926390785096 0.004894764901962149 1.6732845509978402e-09 8.776430198655085 -0.0329369158748124 QTETSVNASRS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 QTETSVNASRSPEK 14 1 H0YG46;J3KNE4;A0A0A0MTP3;Q99550-2;Q99550;U3KQJ0 H0YG46 MPHOSPH9 M-phase phosphoprotein 9 1 QTETSVNAS(0.05)RS(0.95)PEK;QTETSVNASRS(1)PEK 183.21 1.4756e-26 108872000.0 16195.8 17385.3 16893.4 14584.3 18172.4 15180.599999999999 16771.3 19010.5 16687.1 17904.0 17981.300000000003 True False 17839.985693282197 18850.420244715646 18039.887712266696 15485.139087651512 16896.03331537663 15056.97422671189 17409.5409991075 18631.32066405126 15985.799217953392 16773.538384484236 15769.714092852155 1.1312814923745778 1.1953558659164192 1.1439578172468916 0.9819543332539155 1.0714229323304596 0.9548032474182063 1.1039858361794028 1.1814621720057799 1.0137025391728047 1.0636551991825318 1.0 13.944868883649752 -2.0000000000000004 0.21402347698289592 1.0002687052678039 1.8904417823696549 0.1683230739968653 0.07127241156016628 40.29384207573171 0.46230909386108915 0.04778851152853387 12.45257833906215 0.00999999999999999 2.0000000000000004 0.890173077101851 QTGIET(ph)PNK ddPTM_A549_PD325901_60min_R1 2 QTGIETPNK 9 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 QT(0.066)GIET(0.934)PNK;QT(0.001)GIET(0.999)PNK 109.16 0.00043926 182662000.0 23490.3 23488.2 23993.0 23090.1 27066.0 23335.0 22785.2 23493.6 22766.3 21839.6 25650.8 True False 25875.017963355116 25467.633045845065 25621.309261629674 24516.323035578134 25164.977532631 23144.96749669459 23652.303254539846 23025.001717627325 21809.511582940853 20460.64392883055 22495.91421381834 1.1502096655161107 1.1321003807083028 1.1389316752413434 1.0898122566860935 1.1186465814833682 1.028852051830708 1.051404403027603 1.0235192710454055 0.9694876756573041 0.9095271138730779 1.0 14.457375377492928 -7.419649483708854 0.7338791986959982 0.9854622222867687 1.1431528332463863 0.8367747472108017 0.02996203158224465 0.138033679886769 0.14688148154780248 0.004063028497784009 0.009739565080981501 3.804963686051353e-08 7.419649483708854 0.15769061095961756 QTGIET(ph)PNKSGK ddPTM_A549_MK2206_60min_R1 2 QTGIETPNKSGK 12 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 QT(0.061)GIET(0.939)PNKSGK;QTGIET(0.984)PNKS(0.016)GK 105.28 6.543e-05 63686000.0 10682.7 13519.2 13268.3 11683.5 17159.9 11872.0 12399.3 10462.3 18945.0 19410.699999999997 20212.0 True False 12485.678593060671 14207.269534828029 15149.944453931852 14545.958024492244 14635.701441582083 13128.287160004193 14652.092310861128 11945.363064449972 14653.987748948379 15025.809388683365 15192.802577178363 0.8218153648501852 0.9351315836993276 0.9971790508677517 0.9574242770943547 0.9633312463078325 0.8641122724601614 0.9644101038257776 0.7862514505647245 0.9645348627751303 0.9890084013369697 1.0 13.891100404178697 -8.983535482723159 23.800385359991758 0.984353773130546 0.9156669210961932 0.2220566462712381 0.06171444013696202 67.55522050042923 97657.52912243629 0.01079568831372209 0.010918936460368091 1.0386387401046193e-09 8.983535482723159 -0.06868685203435276 QTGIET(ph)PNKSGK ddPTM_A549_PD325901_60min_R1 4 QTGIETPNKSGK 12 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 QT(0.001)GIET(0.999)PNKSGK;QT(0.016)GIET(0.984)PNKSGK;QTGIET(0.998)PNKS(0.002)GK;QT(0.001)GIET(0.999)PNKSGK 126.63 4.6723999999999994e-07 123372000.0 22790.1 21299.2 26710.4 24962.399999999998 29414.3 29747.6 27538.6 28186.200000000004 26813.4 24992.199999999997 24923.300000000003 True False 25103.734174815098 23094.15833354889 28523.128366683326 26504.27075427631 27348.34104182619 29505.345408385354 28586.59649270014 27624.004129353878 25686.526044110225 23414.18822680447 21857.892101815884 1.1484974881328818 1.0565592613402233 1.3049349971086057 1.2125721286763247 1.2511883997979008 1.349871491310644 1.3078386680445393 1.2638000041668687 1.1751602544499828 1.0712006499867064 1.0 14.415866658835274 -9.93101040848122 0.8199542229471244 1.0165192209193565 1.236129800852588 0.46660828439458557 0.0800270988860853 0.3321415013817966 0.45675679994818846 0.03571058221631324 0.017495122864679465 1.1721672725657125e-10 9.93101040848122 0.21961057993323152 QTHLRAT(ph)PTK ddPTM_A549_MK2206_60min_R1 4 QTHLRATPTK 10 1 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 1 QTHLRAT(0.994)PT(0.006)K;QT(0.001)HLRAT(0.999)PT(0.001)K;QTHLRAT(1)PTK;QT(0.005)HLRAT(0.975)PT(0.02)K 70.622 0.0011979 38198300.0 6964.4 6747.27 5912.530000000001 5517.6 9071.9 7083.32 5471.92 6169.07 10165.199999999999 8775.19 8669.1 True False 8139.820456767649 7090.6772230797 6751.015660047308 6869.412247694478 7737.435527473263 7832.872220872717 6466.097034320261 7043.554564484519 7862.798430488784 6792.868484365864 6516.323215011727 1.2491431422578692 1.088140810257052 1.0360160841154897 1.054185316018293 1.187392839822378 1.202038628597802 0.9922922514684723 1.0809093306265414 1.206631127869036 1.0424388509024622 1.0 12.669842449165468 -11.086870098064052 1.4223145128648647 1.0001880446549543 1.1272321103928997 0.19064853004496873 0.07821077456496878 0.4842881569502233 1.7543078735735316 0.0579601122481905 0.012792283774551492 8.187096359678288e-12 11.086870098064052 0.12704406573794547 QTHLRAT(ph)PTK ddPTM_A549_PD325901_60min_R1 4 QTHLRATPTK 10 1 Q6ZN55;A0A0C4DFM2;Q6ZN55-2 Q6ZN55 ZNF574 Zinc finger protein 574 1 QTHLRAT(0.999)PT(0.001)K;QT(0.004)HLRAT(0.991)PT(0.005)K;QTHLRAT(0.987)PT(0.013)K;QT(0.01)HLRAT(0.988)PT(0.002)K 95.273 0.00031537 60926000.0 7742.5 8184.1 8465.7 6606.2 8902.6 7009.89 8032.06 7343.51 8460.9 7770.46 9869.599999999999 True False 8528.512900272754 8873.802829101443 9040.233310389629 7014.249970231236 8277.312088302691 6952.803779961627 8337.724438611884 7197.037932177846 8105.317796572323 7279.831829484998 8655.70176854919 0.9853057704993278 1.025197386229818 1.0444252299955215 0.810361789002224 0.9562843440815635 0.8032628625474244 0.963263830196566 0.831479425311134 0.9364137089407693 0.8410446690684901 1.0 13.079435076751114 QTIDNSQGAYQEAFDISKK ddPTM_A549_PD325901_60min_R1 1 QTIDNSQGAYQEAFDISKK 19 1 P27348 P27348 YWHAQ 14-3-3 protein theta 0 144.72 1.1736e-20 2507000.0 2356.2 2347.4 2391.6 2371.4 3085.9 2806.4 2307.9 3236.5 2409.6 2686.8 3000.7 False True 2595.399689457238 2545.2236362010162 2553.9083578591058 2517.8759921598407 2869.1570297770627 2783.545608858954 2395.7283974313395 3171.945468514866 2308.332891609718 2517.1549894678424 2631.632923004535 0.986231653651023 0.9671651444819039 0.9704652710239349 0.9567732528916617 1.0902573093292003 1.0577256366290555 0.9103581189036566 1.2053145561400929 0.8771485078451955 0.9564992774881411 1.0 11.361742551435135 QTIS(ph)PGSTASK ddPTM_A549_MK2206_60min_R1 1 QTISPGSTASK 11 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4 Q8IVL0-3 NAV3 Neuron navigator 3 1 QT(0.001)IS(0.426)PGS(0.426)T(0.141)AS(0.005)K 63.602 0.0066465000000000005 3275200.0 2884.7 3391.2 3698.6 2693.6 4441.0 2991.7 2912.8 2713.0 4394.2 5001.7 4692.5 True False 3371.5668358563 3563.7975950136683 4223.117095431391 3353.5321209202993 3787.734782957127 3308.279708270263 3442.018056106094 3097.576058214043 3398.9207160954834 3871.812496168487 3527.22274358844 0.9558701224596372 1.010369305848833 1.1972924315902371 0.9507571153582902 1.0738575526147955 0.9379276413103885 0.975843689589146 0.8781912239153647 0.9636251984011568 1.0976943554830554 1.0 11.784316969278983 -7.262091226612647 24.999904842555424 0.9703161697325875 1.0401588020946884 0.13083160038832264 0.0789297271786482 75.91446422699006 2911474.205020705 0.010000664829125427 0.016592796479450368 5.4690107040827795e-08 7.262091226612647 0.06984263236210086 QTKEETDS(ph)VVLIENLK ddPTM_A549_PD325901_60min_R1 1 QTKEETDSVVLIENLK 16 1 A0A494C1C4;P78552 A0A494C1C4 IL13RA1 Interleukin-13 receptor subunit alpha-1 1 QT(0.092)KEET(0.092)DS(0.817)VVLIENLK 88.01899999999999 3.567e-06 1496500.0 1112.9 1333.8 1391.7 1204.9 1196.1 795.42 1202.2 1461.3 1161.6 1453.4 1261.7 True False 1225.8807887263217 1446.2040069715076 1486.1491309719515 1279.3239364735578 1112.090062320991 788.9423632406606 1247.9503788690822 1432.1532251323263 1112.7819915728123 1361.632075961204 1106.5188985752734 1.1078715332424378 1.3069853653955703 1.3430851772034629 1.1561699832879346 1.0050348563887077 0.7129949287413739 1.1278165971461604 1.2942871802518074 1.005660177160646 1.230554740379408 1.0 10.111812376242035 -6.589981831431179 3.878417319268358 1.01299661430237 1.2578328322475292 0.21605506395132668 0.15453966434532893 0.181314782501632 5.467762466057382 0.02032469123511037 0.04473026494993298 2.5705033166922376e-07 6.589981831431179 0.24483621794515908 QTKEETDS(ph)VVLIENLKK ddPTM_A549_PD325901_60min_R1 2 QTKEETDSVVLIENLKK 17 2 A0A494C1C4;P78552 A0A494C1C4 IL13RA1 Interleukin-13 receptor subunit alpha-1 1 QT(0.005)KEET(0.005)DS(0.99)VVLIENLKK;QT(0.032)KEET(0.025)DS(0.943)VVLIENLKK 73.21 0.00012249 5303300.0 2931.5 3391.8 3390.0 3160.1000000000004 3570.9 3899.1000000000004 3292.8 3172.5 3874.5 3883.9 3219.6000000000004 True False 3229.1037219437603 3677.638889523136 3620.0657857260267 3355.2921998921825 3320.09230293623 3867.3470223424874 3418.1093058892966 3109.2219987218946 3711.668238936689 3638.6698911694807 2823.6096107259655 1.1436084186983413 1.3024601118911743 1.2820702167801759 1.1882989019255812 1.1758326258432787 1.369646500582696 1.2105459950642687 1.1011515143279658 1.314511830827208 1.288658983645391 1.0 11.46332492157059 -10.91112185633802 1.0263440990895172 0.9922245533780151 1.2388962802874586 0.0 0.1136961333468954 0.3318992772821888 0.5874409619952773 0.06245101638458081 0.013016890242891273 1.2270948789403799e-11 10.91112185633802 0.2466717269094435 QTLENS(ph)QTSSR ddPTM_A549_MK2206_60min_R1 1 QTLENSQTSSR 11 0 B4DZ85;B4DF87;Q13772;Q13772-3;Q13772-4 B4DZ85 NCOA4 Nuclear receptor coactivator 4 1 QTLENS(0.969)QT(0.026)S(0.004)S(0.001)R 79.46600000000001 0.00096098 2121100.0 941.11 857.26 619.03 589.12 549.01 567.14 550.09 340.85 988.59 957.42 911.72 True False 1099.9463600695824 900.8908723464908 706.8177622843492 733.454426446602 468.25135626914954 627.1543783629365 650.0342325197064 389.1665313093462 764.6759434538335 741.1381570429317 685.3147618080875 1.6050235911562145 1.3145651057765662 1.0313768237233496 1.070244604846255 0.6832646578832583 0.9151333275067582 0.948519233417212 0.5678653853633562 1.1158025276390733 1.0814565778322993 1.0 9.420622953029522 -5.489880601827412 1.7160949573894044 0.9779248584396 1.6835001941237409 0.6160618731186001 0.16476488128161276 0.34506684895504725 1.3739760476573264 0.025068857124146863 0.342733837177511 3.2368263296882153e-06 5.489880601827412 0.7055753356841409 QTLENS(ph)QTSSR ddPTM_A549_PD325901_60min_R1 2 QTLENSQTSSR 11 0 B4DZ85;B4DF87;Q13772;Q13772-3;Q13772-4 B4DZ85 NCOA4 Nuclear receptor coactivator 4 1 QT(0.003)LENS(0.951)QT(0.033)S(0.01)S(0.003)R;QTLENS(0.989)QT(0.01)S(0.001)SR 93.228 0.00029107 4465000.0 1816.17 1962.94 2106.35 1576.5100000000002 2586.36 1997.13 1978.32 2312.27 1962.95 2161.14 2111.74 True False 2000.546241406312 2128.3638427385295 2249.299577511509 1673.8874421860132 2404.7029960576206 1980.8660354263423 2053.6060501782413 2266.149960909276 1880.454037842503 2024.6852515775408 1852.0093674228 1.080203090003919 1.1492187243633092 1.2145184668485591 0.9038223410907171 1.2984291755521367 1.0695766826400317 1.1088529498292856 1.2236168999851127 1.0153588156302287 1.0932370468487593 1.0 10.854875680398596 -8.878421824788326 9.434416940338544 1.0067862492199184 1.1295718848390777 0.13443445757084072 0.09996279762924598 0.2639566607319741 20.756864844553423 0.015203378691475908 0.016166233475269753 1.3230558433455196e-09 8.878421824788326 0.12278563561915923 QTLPSS(ph)PTTTK ddPTM_A549_MK2206_60min_R1 1 QTLPSSPTTTK 11 0 F8VW64;F8VWX1;F8W659;J3KQU3;P51513-2;P51513 F8VW64 NOVA1 RNA-binding protein Nova-1 1 QTLPS(0.005)S(0.871)PT(0.093)T(0.025)T(0.007)K 147.52 1.4177e-18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QTNGCLNGYT(ph)PSR ddPTM_A549_MK2206_60min_R1 2 QTNGCLNGYTPSR 13 0 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QTNGCLNGYT(0.701)PS(0.299)R;QTNGCLNGYT(0.787)PS(0.213)R 103.88 0.00012563 15288800.0 5872.4 5699.299999999999 5939.2 4873.799999999999 7699.799999999999 5651.4 4650.8 5567.6 7707.9 8772.1 7587.5 True False 6863.517553604381 5989.370026321481 6781.467867081086 6067.881218793192 6567.1696198633845 6249.427396904289 5495.790159069705 6356.8243500598965 5962.072956987027 6790.476517511957 5703.314345653122 1.2034261374415611 1.0501560431937935 1.1890398207227868 1.0639219322389148 1.1514654851294783 1.0957536299340394 0.9636134054680705 1.1145842513318345 1.0453698666515063 1.1906193672609744 1.0 12.477584835591152 -2.0000000002163794 0.10976451777826705 0.9563343557452347 1.578509323339191 0.0 0.07957285234404704 60.63185761980457 0.449297630443642 0.2456715938840485 5.744179372767841 0.009999999995017682 2.0000000002163794 0.6221749675939562 QTNGCLNGYT(ph)PSR ddPTM_A549_PD325901_60min_R1 1 QTNGCLNGYTPSR 13 0 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QTNGCLNGYT(0.998)PS(0.002)R 93.51 0.0001859 6946800.0 4291.6 4060.0 4544.3 3925.2 4498.3 4339.5 4124.1 4650.6 4327.1 4239.6 4937.5 True False 4727.280072691062 4402.1504485712385 4852.703525095806 4167.650689224009 4182.354926292546 4304.160550756641 4281.044882294112 4557.840134674878 4145.247034895587 3971.9109324653386 4330.218801391303 1.0916954291483338 1.016611550242409 1.1206601208088212 0.9624572984360372 0.9658530245512656 0.9939822323467143 0.9886440105332803 1.05256578102022 0.957283505758119 0.9172540960722725 1.0 12.080224209315464 -6.273374411242336 24.994307426164298 0.9843331276870713 1.07035128672828 0.5423220438197026 0.03924132027157019 383.68441494513684 803509.891963919 0.004663515849763403 0.010911413313691226 5.328752982843978e-07 6.273374411242336 0.0860181590412088 QTPADGEAS(ph)GESEPAKGSEEAK ddPTM_A549_MK2206_60min_R1 1 QTPADGEASGESEPAKGSEEAK 22 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 QTPADGEAS(0.999)GES(0.001)EPAKGSEEAK 139.93 1.6943e-23 13472000.0 3500.3 3173.4 3443.8 3326.0 5145.7 3690.3 3256.8 3572.9 5175.2 5128.3 5141.4 True False 4091.0650658813097 3334.9125053126863 3932.1826240325026 4140.870149309813 4388.774346467574 4080.805096577116 3848.5184032979687 4079.3695165473464 4003.025463096207 3969.813468240966 3864.648484578708 1.0585865913047674 0.8629277717288254 1.017474846605915 1.0714739428005744 1.1356205781665034 1.0559317652979172 0.9958262487920689 1.0555603007169863 1.0358058382462652 1.0272120437555712 1.0 11.916121482093505 -5.976059255760793 24.96260866925804 1.033097100632178 0.9556181679707448 0.23131159330010487 0.05618991668667015 242.47622173932498 252822.73406619742 0.0075967401610274364 0.02361737220922638 1.0566733253564415e-06 5.976059255760793 -0.07747893266143324 QTPADGEAS(ph)GESEPAKGSEEAK ddPTM_A549_PD325901_60min_R1 2 QTPADGEASGESEPAKGSEEAK 22 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 QTPADGEAS(0.999)GES(0.001)EPAKGSEEAK;QTPADGEAS(0.996)GES(0.004)EPAKGSEEAK 173.07 8.843200000000001e-41 26786000.0 6529.6 7109.0 7177.9 7000.3 8795.5 6291.4 7692.0 8232.5 8792.599999999999 9210.8 9186.7 True False 7192.4801851625425 7708.100379037671 7665.035458219132 7432.692632165193 8177.734422827749 6240.164924307022 7984.7232692239095 8068.296329228685 8423.077599090137 8629.22851607504 8056.794139289422 0.8927223484695975 0.9567205324818558 0.9513753641588215 0.922537240453897 1.0150109685623658 0.7745220762035483 0.9910546466969965 1.0014276385545426 1.0454626807472358 1.071049894894808 1.0 12.975990178079805 -7.98476721173172 24.999952886659113 1.0194070001771491 0.922911934430698 0.4417041106728371 0.05831910485984237 175.67821513415035 288321.1283105184 0.00833648418583627 0.011516263688181603 1.0356971669279105e-08 7.98476721173172 -0.09649506574645117 QTPADGEASGESEPAKGS(ph)EEAK ddPTM_A549_MK2206_60min_R1 1 QTPADGEASGESEPAKGSEEAK 22 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 QTPADGEAS(0.003)GES(0.069)EPAKGS(0.928)EEAK 119.85 1.1368e-15 13808000.0 3111.3 3527.0 2940.9 2712.1 4192.3 2699.9 3001.8 2892.2 4377.3 4625.6 4263.3 True False 3636.4113760182017 3706.509234964973 3357.96384198188 3376.564621750794 3575.618223506229 2985.601625951427 3547.188204071433 3302.1782069910264 3385.8485391117297 3580.6737473812777 3204.6049489058273 1.1347456032793712 1.1566197063480523 1.0478557873813479 1.053660178270548 1.1157750426388997 0.9316598062955698 1.1069034282314818 1.030447827311293 1.0565572334486302 1.117352623637386 1.0 11.64593080269709 -2.000000000000182 0.29685366572006977 1.0216907954811536 2.135968127003226 0.19485658666224226 0.056688186402221986 33.616574043538066 0.4201869032107144 0.015624446141744727 20.15845514098524 0.009999999999995807 2.000000000000182 1.1142773315220722 QTPMAS(ph)SPRPK ddPTM_A549_MK2206_60min_R1 3 QTPMASSPRPK 11 1 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK4 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QT(0.001)PMAS(0.499)S(0.499)PRPK;QT(0.002)PMAS(0.499)S(0.499)PRPK;QTPMAS(0.5)S(0.5)PRPK 95.631 7.9249e-05 138216900.0 9795.5 8366.9 8920.0 7636.7 10976.5 7984.0 9174.9 8725.900000000001 12549.5 12528.3 12861.5 True False 11448.740923018133 8792.739472080642 10184.990129034766 9507.691842824484 9361.871390481623 8828.861580649724 10841.86056817077 9962.823046947997 9707.058287433503 9698.14832871776 9667.634590658008 1.1842339318535309 0.9095026699268515 1.0535141800742744 0.9834558550663387 0.9683724909843149 0.913239065653267 1.1214594910990363 1.0305336795181765 1.0040779051386148 1.0031562775541019 1.0 13.238947228989382 -5.241863343072111 24.487421976898517 1.0013157723027672 1.1842341541172001 0.4670759319503607 0.056902639338263235 2175.068327717159 2720713.2748892675 0.007088168520853789 0.3601029068563936 5.729762977538159e-06 5.241863343072111 0.18291838181443287 QTPMAS(ph)SPRPK ddPTM_A549_PD325901_60min_R1 3 QTPMASSPRPK 11 1 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK4 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QT(0.002)PMAS(0.673)S(0.326)PRPK;QTPMAS(0.626)S(0.374)PRPK;QTPMAS(0.5)S(0.5)PRPK 97.86 7.7476e-05 325248000.0 11712.0 12819.3 12307.7 11369.2 14650.4 11893.8 13349.900000000001 13381.4 14120.2 14536.400000000001 13707.3 True False 12900.993618081302 13899.62740033726 13142.974534212453 12071.449662673385 13621.406445136228 11796.940836176816 13857.937749845589 13114.497479494783 13526.777098318198 13618.569223202463 12021.388997733875 1.0731699656764488 1.1562413796739668 1.093299163406991 1.0041642995621345 1.1330975520136624 0.9813292655616278 1.1527734234752671 1.09093029781891 1.1252258038458036 1.1328615375286224 1.0 13.553315979788966 -10.910648989503585 1.1499254219176014 0.9997294598532772 1.0923620599420325 0.0 0.06568026093341718 0.48530852224554033 1.1344415445690121 0.03581720824922757 0.008403151385291 1.2284316872673403e-11 10.910648989503585 0.09263260008875529 QTPMASS(ph)PRPK ddPTM_A549_MK2206_60min_R1 2 QTPMASSPRPK 11 1 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK4 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QTPMAS(0.157)S(0.842)PRPK;QTPMAS(0.419)S(0.58)PRPK 59.898 0.0023994 99709000.0 7562.0 7403.200000000001 7203.4 6674.700000000001 8786.0 6367.9 7120.1 5978.5 10331.4 11496.5 11024.0 True False 8838.280726850406 7779.991258376146 8224.950436714018 8310.001799638674 7493.591038743823 7041.746951330085 8413.73000593278 6825.970683388374 7991.354395855644 8899.432665333987 8286.43655307809 1.0665960778481223 0.9388826196329447 0.9925799086289712 1.00284383358391 0.9043200887069176 0.8497919348352879 1.0153616638514424 0.8237522413482777 0.9643897403507138 1.0739758409214142 1.0 13.016536112265037 -5.253488969905265 23.760019454931808 0.9614103417012085 1.0665961819463718 0.16387957190207658 0.07067420125199611 637.2494065782704 1904342.604502255 0.008504232989331525 0.12394940368328607 5.578417698768939e-06 5.253488969905265 0.10518584024516331 QTPMASS(ph)PRPK ddPTM_A549_PD325901_60min_R1 2 QTPMASSPRPK 11 1 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK4 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QT(0.066)PMAS(0.133)S(0.802)PRPK;QT(0.001)PMAS(0.211)S(0.788)PRPK 55.885 0.0036841 221682600.0 7164.2 7540.200000000001 7875.1 8787.599999999999 8511.5 7741.700000000001 7694.4 7899.9 9728.9 8610.6 8560.2 True False 7891.504309994706 8175.639116334206 8409.551642823313 9330.390093912381 7913.681603080944 7678.654161952453 7987.214602537237 7742.330297148343 9320.028166161095 8066.9252465058125 7507.349667578702 1.051170474192113 1.0890180261140072 1.1201758297126971 1.2428340901991919 1.054124551738549 1.0228182383875828 1.063919353194761 1.031300077920232 1.2414538524042167 1.074537034200458 1.0 12.874087965199065 -3.4840883248206955 10.118794266670859 1.1028893535689088 1.1026431365880025 0.0 0.07907066799401606 0.0 0.0 0.012845287237141824 0.0 0.0003280285733813733 3.4840883248206955 -0.00024621698090632194 QTPPARQS(ph)PPAR ddPTM_A549_MK2206_60min_R1 1 QTPPARQSPPAR 12 1 Q9Y5V3;Q9Y5V3-2 Q9Y5V3 MAGED1 Melanoma-associated antigen D1 1 QT(0.002)PPARQS(0.998)PPAR 57.703 0.0038134 17550000.0 2222.8 2609.1 2421.4 2209.0 2740.8 2756.1 2350.3 2284.1 3472.1 4074.2 3612.6 True False 2597.9542977576134 2741.8920456328647 2764.7909303189244 2750.2050991657793 2337.631950715805 3047.748672648885 2777.319087224032 2607.878169762882 2685.6748938043634 3153.8353903452094 2715.49171731222 0.9567159719894324 1.009722117048759 1.01815480146465 1.0127834607751698 0.8608503335924668 1.1223560923490983 1.022768388324531 0.9603705115860736 0.9890197332152539 1.161423314325871 1.0 11.406997747478313 -7.257799783354975 24.994435904503547 1.0021245625284012 0.9786300344894697 0.05716570547145183 0.07399336607691147 1013.0041722777371 6956685.1776757 0.008042814943653394 0.013650800574874361 5.523320144145092e-08 7.257799783354975 -0.023494528038931484 QTPPARQS(ph)PPAR ddPTM_A549_PD325901_60min_R1 2 QTPPARQSPPAR 12 1 Q9Y5V3;Q9Y5V3-2 Q9Y5V3 MAGED1 Melanoma-associated antigen D1 1 QT(0.012)PPARQS(0.988)PPAR;QT(0.048)PPARQS(0.952)PPAR 57.973 0.0036540999999999995 40171000.0 5763.1 5895.9 6319.4 5889.8 7323.1 6196.6 5620.9 6106.3 7273.1 7550.0 7588.700000000001 True False 6348.165669430014 6392.768184662849 6748.272485639252 6253.599569293684 6808.750719323505 6146.136944076184 5834.8064253745015 5984.5050562003225 6967.43689988655 7073.29171150894 6655.3380087328005 0.9538457191956696 0.9605474847820772 1.013963900373581 0.9396366587373961 1.0230510772539883 0.9234898266641801 0.876710757247545 0.8992037742257051 1.0468945214719716 1.062799770984993 1.0 12.700296223697714 -8.774795890593838 24.99988234402402 1.02214463716123 0.9502915730493665 0.4339986802546789 0.043773882331996264 190.22913696949712 356057.81396712054 0.007955813130902007 0.008493342255881605 1.6795932066560924e-09 8.774795890593838 -0.07185306411186343 QTPRS(ph)PDSTANVR ddPTM_A549_MK2206_60min_R1 1 QTPRSPDSTANVR 13 1 B7ZM87;O75044;E9PDX4;A0A087WW56;A0A286YEY3;A0A075B7B5;P0DMP2 B7ZM87 SRGAP2;SRGAP2B SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B 1 QT(0.03)PRS(0.944)PDS(0.013)T(0.013)ANVR 62.891000000000005 0.0017640999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QTPRS(ph)PDSTANVR ddPTM_A549_PD325901_60min_R1 1 QTPRSPDSTANVR 13 1 B7ZM87;O75044;E9PDX4;A0A087WW56;A0A286YEY3;A0A075B7B5;P0DMP2 B7ZM87 SRGAP2;SRGAP2B SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B 1 QT(0.007)PRS(0.98)PDS(0.011)T(0.002)ANVR 64.842 0.0011581 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QTPS(ph)PDVVLR ddPTM_A549_MK2206_60min_R1 2 QTPSPDVVLR 10 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 QTPS(1)PDVVLR;QTPS(1)PDVVLR 208.0 3.7158999999999994e-26 226080000.0 9970.1 9861.7 9332.5 9200.6 11576.599999999999 9185.3 8644.099999999999 8647.6 12143.5 12744.7 12566.0 True False 11652.809134457968 10363.618407273625 10655.988831750787 11454.747413030625 9873.697475429286 10157.282349291323 10214.62107895725 9873.423782164311 9393.016639184727 9865.663418421436 9445.515396043116 1.2336869557525176 1.0971998851026294 1.1281532436244568 1.2127180924218504 1.0453317856604778 1.0753550148831876 1.0814254861345445 1.0453028096593282 0.9944419383530536 1.0444812172509217 1.0 13.20541380430685 -7.370178959215865 0.5190535479072196 0.992928109580518 1.1795646648672895 0.6137429320642656 0.046169401402543137 0.3944769548717208 0.20141735261750535 0.010429675912753265 0.03079248700959953 4.264037748932696e-08 7.370178959215865 0.18663655528677148 QTPS(ph)PDVVLR ddPTM_A549_PD325901_60min_R1 2 QTPSPDVVLR 10 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 QTPS(1)PDVVLR;QTPS(1)PDVVLR 236.57 2.0906e-45 255910000.0 14385.2 15556.5 16359.8 14374.9 16526.1 13226.3 16759.4 16582.699999999997 17554.4 17442.0 18034.0 True False 15845.574914175475 16867.500850541506 17470.074407469234 15262.804925233411 15365.363747949945 13118.589397965785 17397.18813809557 16251.945039623504 16816.649615070397 16340.709143329668 15815.932326944978 1.0018742231958084 1.0664879250782462 1.1045870737386856 0.9650272022997199 0.9715117281940175 0.8294540673783842 1.0999786657190402 1.0275679424813742 1.0632727345716153 1.0331802644027914 1.0 13.949090982753123 QTPT(ph)PPTTQLPQQVQPSLPAAPSADQPQQQPR ddPTM_A549_MK2206_60min_R1 2 QTPTPPTTQLPQQVQPSLPAAPSADQPQQQPR 32 0 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 QT(0.179)PT(0.728)PPT(0.046)T(0.046)QLPQQVQPS(0.001)LPAAPSADQPQQQPR;QT(0.162)PT(0.583)PPT(0.127)T(0.127)QLPQQVQPS(0.001)LPAAPSADQPQQQPR 60.632 0.001271 15415000.0 685.11 809.52 983.28 779.94 1338.98 615.0899999999999 713.16 836.56 1322.9 1198.15 1600.1100000000001 True False 800.739818668669 850.7211102605174 1122.7238894705506 971.0253350128369 1142.017815736081 680.1784155363027 842.7319407074374 955.1449418575522 1023.2652622372032 927.4870828486852 1202.758526210611 0.6657527685057991 0.7073083181050346 0.9334574355567313 0.8073319073215232 0.9494988319343712 0.5655153555047 0.7006659461085121 0.794128597755041 0.8507653364645719 0.771133242988357 1.0 10.232131311210193 -9.66610074043335 0.7856571242757634 0.9815472703978995 0.76874478888264 0.035511074873286086 0.12381991332653047 0.4347701785166943 0.5693444229104395 0.04109095778945646 0.023882266202758563 2.157243949426249e-10 9.66610074043335 -0.2128024815152595 QTPT(ph)PPTTQLPQQVQPSLPAAPSADQPQQQPR ddPTM_A549_PD325901_60min_R1 3 QTPTPPTTQLPQQVQPSLPAAPSADQPQQQPR 32 0 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 QT(0.148)PT(0.556)PPT(0.148)T(0.148)QLPQQVQPSLPAAPSADQPQQQPR;QT(0.179)PT(0.727)PPT(0.046)T(0.046)QLPQQVQPS(0.001)LPAAPSADQPQQQPR;QT(0.156)PT(0.521)PPT(0.154)T(0.154)QLPQQVQPS(0.015)LPAAPSADQPQQQPR 78.667 8.955399999999999e-06 11213300.0 788.8299999999999 1024.13 696.31 954.26 1458.1 755.74 1152.57 1032.42 1175.94 838.6 1001.22 True False 868.911440894046 1110.4370292845476 743.5657838521802 1013.202472918298 1355.6880861719228 749.5855040047984 1196.4316820605047 1011.827573182178 1126.5193312415056 785.6506528836288 878.0762872565067 0.9895625852839101 1.2646247773687607 0.8468122811691043 1.1538888905472946 1.543929731216958 0.8536678587994108 1.3625600638854274 1.152323081566829 1.2829401586065412 0.8947407694362686 1.0 9.778202476307037 -3.777550678137469 0.7514698283873943 1.1544488800734491 2.6007481354106858e-06 0.021154550411722206 0.21425573422209115 67.51551598030625 4.644747968847644 0.03111772979619757 108.09491065338314 0.00016689730421752197 3.777550678137469 -1.1544462793253136 QTPTHPLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 QTPTHPLTPR 10 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 QT(0.031)PT(0.066)HPLT(0.902)PR;QT(0.013)PT(0.062)HPLT(0.925)PR 66.98899999999999 0.0042764 91894000.0 1240.6799999999998 1142.73 1447.24 1749.6100000000001 1452.15 975.64 692.1600000000001 879.4300000000001 1695.4699999999998 1527.48 1669.01 True False 1450.0764522862667 1200.8900760055355 1652.4803939847848 2178.264528542977 1238.5406586514734 1078.8815772225819 817.9165125358404 1004.0918956414216 1311.448752109237 1182.4212071190675 1254.5487546673494 1.1558550011639543 0.957228701983733 1.3171910520312533 1.7362932452318731 0.9872399570313067 0.8599758066067774 0.6519607225250609 0.8003609998462453 1.0453549511170452 0.9425071785532904 1.0 10.292952822965997 -6.958004911409054 24.999900527365163 0.9610559415140987 1.2811037898117597 0.4384054539070523 0.20662416347309775 134.10768333939575 79834.45842349998 0.03200180957443966 0.06047770545699325 1.1015268523728984e-07 6.958004911409054 0.320047848297661 QTPTHPLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 QTPTHPLTPR 10 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 QT(0.004)PT(0.023)HPLT(0.972)PR;QT(0.001)PT(0.003)HPLT(0.996)PR 85.163 0.00076003 128643000.0 5596.9 4779.1 5749.1 5879.6 5873.3 5653.6 5520.4 6048.4 6256.299999999999 6733.4 6978.4 True False 6165.093167779985 5181.851529252909 6139.268498146755 6242.76953845956 5460.77966978503 5607.55895604511 5730.4818428787885 5927.759917121993 5993.369467869301 6308.251974870765 6120.101039722348 1.0073515335393348 0.846693787507795 1.003131885944366 1.0200435414286522 0.8922695286143135 0.9162526761648871 0.936337783589724 0.9685722308582864 0.9792925686960886 1.0307431092930048 1.0 12.579339755930189 -8.719162528563515 1.6819325511994858 0.9919405235494375 0.944341376090803 0.1887754611000233 0.05044609823306783 0.479895200793026 2.657875495859515 0.009100691386314249 0.0099320116119029 1.9091386567364992e-09 8.719162528563515 -0.04759914745863447 QTQS(ph)ASSTLQK ddPTM_A549_MK2206_60min_R1 2 QTQSASSTLQK 11 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83 A0A0D9SEY1 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QTQS(0.692)AS(0.232)S(0.06)T(0.016)LQK;QTQS(0.908)AS(0.085)S(0.006)T(0.001)LQK 173.59 3.1934e-15 49620000.0 10486.400000000001 12320.5 10973.5 9116.1 11827.599999999999 9682.1 11041.6 10467.7 14652.300000000001 14854.7 15540.400000000001 True False 12256.247952134889 12947.560824889697 12529.707307282852 11349.544909237282 10087.775707926981 10706.653395542175 13047.715795214594 11951.528530986781 11333.577444915092 11499.012952962797 11681.289786779273 1.0492204350590075 1.108401645813425 1.0726304659836285 0.9716003212318681 0.8635840640940344 0.9165643170379886 1.116975610859498 1.0231343241320288 0.9702333947525456 0.9843958298147202 1.0 13.511911957385385 -6.237596093764162 7.835433965095058 0.9832088131675054 1.0802370718067966 0.32990285558857624 0.06077818817397991 0.2174123943624175 59.73193716994379 0.008758884649232954 0.02280995930325298 5.786339432830691e-07 6.237596093764162 0.09702825863929121 QTQS(ph)ASSTLQK ddPTM_A549_PD325901_60min_R1 2 QTQSASSTLQK 11 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83 A0A0D9SEY1 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QT(0.001)QS(0.897)AS(0.022)S(0.063)T(0.016)LQK;QTQS(0.832)AS(0.162)S(0.006)TLQK 166.6 3.1656e-14 17585200.0 8019.9 7691.8 8603.900000000001 7280.9 10065.1 7628.4 8780.8 8214.9 9426.0 8507.7 9993.3 True False 8834.07434406166 8340.014980374448 9187.812393453736 7730.624656876353 9358.162098709978 7566.276839587962 9114.958149038124 8051.047375035615 9029.857999797967 7970.522370066836 8764.1874527481 1.0079741438313996 0.9516016202687851 1.0483359059798298 0.8820697524506208 1.067772928085379 0.8633175500160576 1.0400231850563668 0.9186302116930564 1.030313197713105 0.9094422515538046 1.0 13.097404626390718 -8.819467707036003 24.99999722033301 1.0143145803484512 0.9730756417344878 0.0 0.07106016683097915 136.30971620772834 58724.68058548039 0.00961566020922644 0.010236651501384881 1.5154174818579774e-09 8.819467707036003 -0.04123893861396344 QTQSASS(ph)TLQK ddPTM_A549_PD325901_60min_R1 1 QTQSASSTLQK 11 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83 A0A0D9SEY1 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QTQSAS(0.05)S(0.475)T(0.475)LQK 217.57 2.4575e-31 20860000.0 6686.5 7471.3 8464.4 8294.3 9128.1 7434.3 8790.3 8983.1 9953.1 9688.2 9056.5 True False 7365.308557658866 8100.932671529633 9038.845084572094 8806.620073277967 8486.973746235466 7373.757525634306 9124.819676736728 8803.92502339438 9534.805819837604 9076.485398601442 7942.607913883618 0.9273161457188845 1.0199335985563716 1.1380198018804708 1.1087819226080722 1.0685374172128403 0.9283798980867525 1.1488442808295514 1.1084426071196574 1.2004628609667156 1.142758839037719 1.0 12.955397071208296 QTQSASST(ph)LQK ddPTM_A549_MK2206_60min_R1 2 QTQSASSTLQK 11 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83 A0A0D9SEY1 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QTQSASS(0.035)T(0.965)LQK;QTQSASS(0.009)T(0.991)LQK 215.51 4.0782e-31 27093000.0 4259.799999999999 4176.2 4562.3 4036.6000000000004 6098.9 4751.0 3619.6 5622.6 6832.5 6186.799999999999 6813.1 True False 4978.750097889094 4388.750742007572 5209.302742790956 5025.567181209858 5201.759889163974 5253.74766654144 4277.234467138707 6419.620768490337 5284.949659260479 4789.197583080789 5121.219238005837 0.9721806207671322 0.8569738060494589 1.0171997137188404 0.9813224053978941 1.0157268508562227 1.0258782962369735 0.8351984690279007 1.2535336743345686 1.0319709845732747 0.93516745925247 1.0 12.322271606454123 -5.785170854859755 23.388777634785402 1.0178952940782318 0.9145772859914547 0.12306693254022438 0.0973786612520692 123.26747985832297 121488.08912137194 0.011918914453629489 0.037098572687696695 1.6399444792391628e-06 5.785170854859755 -0.10331800808677705 QTQSASST(ph)LQK ddPTM_A549_PD325901_60min_R1 1 QTQSASSTLQK 11 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83 A0A0D9SEY1 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QTQSASS(0.026)T(0.974)LQK 203.85 2.7618e-24 20731000.0 7196.6 8202.6 10521.0 8329.2 9543.9 8866.0 9314.0 9506.6 10463.0 10873.0 9964.9 True False 7927.193534143093 8893.8618890272 11235.018327912556 8843.675767014318 8873.569388667589 8793.798235512928 9668.449366816369 9316.983405216573 10023.27649606261 10186.476924402215 8739.280472705661 0.907076224284269 1.0176881170943448 1.2855770406959168 1.0119455251075535 1.0153661295550973 1.0062382438665902 1.1063209834050605 1.0661041757745597 1.1469223956556949 1.1655967509243361 1.0 13.093298788507965 -7.774689424527159 24.879732636025867 1.073363237372188 1.048284110865339 0.05140503079041925 0.09619804642016978 1136.3958275366097 2133814.73441925 0.015634567351737617 0.02167097918429009 1.6800050046644656e-08 7.774689424527159 -0.02507912650684907 QTQSESSNYDS(ph)ELEKEIK ddPTM_A549_MK2206_60min_R1 2 QTQSESSNYDSELEKEIK 18 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 QTQSESS(0.001)NYDS(0.999)ELEKEIK;QTQSESSNYDS(1)ELEKEIK 160.88 2.3584e-23 79110000.0 9383.9 11146.4 9281.6 7566.7 11525.099999999999 8572.1 7192.2 8047.9 11199.3 13193.9 12538.8 True False 10967.67290567197 11713.70414987626 10597.870446373227 9420.541839682071 9829.773057207653 9479.193932300539 8498.929642655261 9188.714470660085 8662.676431607151 10213.388826438491 9425.069906724922 1.1636701917559655 1.2428241133276225 1.1244341475718387 0.9995195720469278 1.0429390078257106 1.005742559589611 0.9017365098365109 0.9749226861546996 0.9191100455845115 1.0836406443151252 1.0 13.202287603702418 -6.24067971604776 1.1177813800305383 0.9611779169397745 1.2213758899908467 0.6873562911267761 0.05535808300833117 0.17892156850999177 0.3816804780305109 0.0068792028055451 0.035852485036512206 5.745400183840991e-07 6.24067971604776 0.2601979730510722 QTQSESSNYDS(ph)ELEKEIK ddPTM_A549_PD325901_60min_R1 2 QTQSESSNYDSELEKEIK 18 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 QTQSESSNYDS(1)ELEKEIK;QTQSESSNYDS(1)ELEKEIK 219.34 1.0432999999999998e-56 109931000.0 14155.1 13671.0 14814.6 13248.400000000001 16802.6 12925.900000000001 15720.4 16555.800000000003 17669.1 17326.5 15634.7 True False 15592.115331566129 14823.103148378677 15820.007843426793 14066.723578700543 15622.443341823157 12820.63575596848 16318.64842453296 16225.581581226155 16926.52917295038 16232.501833041011 13711.731016529135 1.1371369021730546 1.0810526497719224 1.1537571605186965 1.0258896970589253 1.1393487316073154 0.935012197986785 1.1901231438146835 1.1833357554685575 1.2344560400540159 1.1838404511781302 1.0 13.743123092994809 QTRS(ph)SPVLQHK ddPTM_A549_MK2206_60min_R1 2 QTRSSPVLQHK 11 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 QT(0.067)RS(0.558)S(0.375)PVLQHK;QT(0.107)RS(0.567)S(0.326)PVLQHK 102.52 9.6555e-05 23621000.0 2821.5 3606.1000000000004 3523.6 2994.5 3928.4 3025.3 3114.3 1778.01 4639.1 6422.3 6549.4 True False 3297.700220947952 3789.635087101557 4023.2994639761114 3728.1526344282124 3350.5375639200124 3345.435237968387 3680.1279978478483 2030.0483624272567 3588.351257120425 4971.497969518933 4923.003225755591 0.6698553849600241 0.7697811505130422 0.8172449375875858 0.7572923403591735 0.6805881309179451 0.6795517054439718 0.7475371900214458 0.412359746547938 0.7288947604883356 1.0098506422887623 1.0 12.265322969548716 -10.300364885309515 0.931958147806905 0.9832968544853531 0.7001136015517901 0.5712835057119375 0.10174208616280676 0.31021462186438165 0.5240215702124257 0.05041131895547393 0.019888757487367136 5.007663232456686e-11 10.300364885309515 -0.28318325293356295 QTRS(ph)SPVLQHK ddPTM_A549_PD325901_60min_R1 3 QTRSSPVLQHK 11 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 QT(0.1)RS(0.45)S(0.45)PVLQHK;QT(0.111)RS(0.444)S(0.444)PVLQHK;QT(0.266)RS(0.367)S(0.367)PVLQHK 98.676 0.00011616 50892000.0 5157.4 5570.3 5160.599999999999 5742.5 6177.3 7298.6 7071.9 7070.4 6847.700000000001 6784.599999999999 7776.4 True False 5680.975451322786 6039.728729969547 5510.8293492087705 6097.201182836254 5743.4277585281 7239.162621443122 7341.025024392168 6929.3753253785 6559.914982518202 6356.219198132921 6819.952098661135 0.8329934534933247 0.8855969429983594 0.8080451694507699 0.8940240480623363 0.8421507476065155 1.061468250321624 1.0764041914360847 1.0160445740870887 0.9618711227907331 0.9320034959454844 1.0 12.735545890881223 -7.248040907091944 24.775083388849243 0.9972475004189645 0.8542276153215783 0.7514158358310861 0.04426841236577125 291.6486142748295 539286.6249205425 0.006544836147151648 0.011294844443481717 5.648837647408359e-08 7.248040907091944 -0.14301988509738617 QTRSS(ph)PVLQHK ddPTM_A549_PD325901_60min_R1 1 QTRSSPVLQHK 11 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 QT(0.012)RS(0.102)S(0.886)PVLQHK 89.01299999999999 8.4517e-05 10592000.0 2626.1 2646.9 2669.2 2714.8 3202.3 3098.2 2849.2 3675.4 3401.3 3674.6 3803.9 True False 2892.69973876736 2869.96355229636 2850.3479632035155 2882.4870302418553 2977.3814953352653 3072.9692864049352 2957.627865142065 3602.091263704478 3258.3551893393646 3442.585128888842 3336.044414908838 0.8671046841702217 0.8602893712896762 0.8544094768238885 0.8640433614612482 0.892488565808446 0.9211415989163046 0.8865672926668412 1.0797491926686205 0.9767121728888624 1.0319362396687142 1.0 11.70392278110119 -8.13665608490461 7.960656512282247 0.9954418676368868 0.8773930887364326 0.8057127754132949 0.03313126793596705 0.10118630250775526 6.153413211198025 0.005114619587596172 0.00661147081039623 7.300353918940423e-09 8.13665608490461 -0.11804877890045418 QTS(ph)IETDR ddPTM_A549_MK2206_60min_R1 2 QTSIETDR 8 0 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 QT(0.066)S(0.934)IETDR;QT(0.199)S(0.8)IETDR 150.21 0.00064647 171905000.0 8990.9 9869.4 9398.2 7718.6 11531.8 7381.4 8058.5 8039.2 10866.8 11929.8 11879.900000000001 True False 10508.344113599478 10371.710304384262 10731.00607967428 9609.657346501119 9835.487496083093 8162.494848623234 9522.625139086435 9178.781219017448 8405.487150713758 9234.849894394067 8929.792961439802 1.1767735443560785 1.1614726510649103 1.2017082731942823 1.0761343950522788 1.1014239119041414 0.914074366994859 1.0663881212259425 1.0278828701463534 0.9412857819895628 1.034161702770887 1.0 13.124411011300111 -6.782987583082519 1.2535844852211957 0.9795539158393645 1.181069589973942 0.6848554993861438 0.04979930349434714 0.161576659384817 0.5017368944125806 0.007379394213260244 0.02063850630647814 1.6482095148250803e-07 6.782987583082519 0.2015156741345776 QTS(ph)IETDR ddPTM_A549_PD325901_60min_R1 2 QTSIETDR 8 0 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 QT(0.006)S(0.994)IETDR;QT(0.005)S(0.995)IETDR 175.33 3.1774000000000003e-06 246710000.0 18141.2 19343.9 20716.0 16969.1 23288.1 14672.6 17683.3 17437.3 17754.5 18260.0 19092.2 True False 19982.88126915442 20974.078340422948 22121.912335427853 18017.242767377727 21652.42419558354 14553.111210285026 18356.247658173048 17089.499372202776 17008.34010793689 17107.060483728896 16743.980435427457 1.193436730663755 1.2526339493353273 1.3211859880474772 1.0760429897096786 1.2931467687199776 0.8691548145561064 1.0962893637485567 1.0206354121176742 1.0157883409819384 1.0216842136015174 1.0 14.031354910533762 -7.24975123400978 24.99889093683828 1.0074865340612762 1.2255112379209763 0.6753865451964467 0.0770799253565338 319.74925883586604 683887.4167319592 0.010220101015524858 0.0176094781111914 5.626635293060361e-08 7.24975123400978 0.21802470385970008 QTSAYNISNSST(ph)FTK ddPTM_A549_MK2206_60min_R1 2 QTSAYNISNSSTFTK 15 0 Q9UIW2 Q9UIW2 PLXNA1 Plexin-A1 1 QTSAYNIS(0.007)NS(0.037)S(0.201)T(0.744)FT(0.011)K;QTSAYNIS(0.001)NS(0.004)S(0.156)T(0.839)FTK 131.56 2.5281e-09 7423900.0 3084.7 3335.5 2867.4 2784.4 4862.1 3776.5 3568.2 3815.7999999999997 5259.1 5061.4 5233.3 True False 3605.3219463257633 3505.262702927607 3274.0404367706606 3466.578124996464 4146.891530784926 4176.1267233621875 4216.495752471082 4356.701335397402 4067.922247056978 3918.0262247050355 3933.72717826774 0.9165155037298257 0.8910792599681984 0.8322998236528494 0.881245182469164 1.0541889009728058 1.0616208328919219 1.071883117813946 1.1075250361708926 1.034113974535553 0.9960086318010446 1.0 11.941681188336288 -6.755967344279175 24.984916442665572 1.0334756598673112 0.8776284193205544 0.8268846737450054 0.03626334738503518 48.26324386290843 220363.9220649921 0.005926196947192287 0.012065045565081828 1.7540123855929203e-07 6.755967344279175 -0.1558472405467568 QTSGGPVDAS(ph)SEYQQELER ddPTM_A549_MK2206_60min_R1 2 QTSGGPVDASSEYQQELER 19 0 A8MUH2;P18859;P18859-2 A8MUH2 ATP5J ATP synthase-coupling factor 6, mitochondrial 1 QTSGGPVDAS(0.499)S(0.499)EY(0.003)QQELER;QTSGGPVDAS(0.466)S(0.466)EY(0.068)QQELER 80.638 0.00024872 2331500.0 710.7 375.88 837.64 693.47 824.6 697.6800000000001 748.39 782.97 1091.38 1040.77 801.79 True False 830.6487850532372 395.01068648671236 956.4299474982836 863.3701811310514 703.3024323410147 771.5080345174977 884.3627756829309 893.9583952450605 844.1841725757336 805.659334153843 602.6834147217414 1.378250611785538 0.6554198719224562 1.5869524930263208 1.4325434548911038 1.166951694971943 1.2801215624519922 1.4673753318585026 1.4832968245157379 1.4007091483768355 1.3367869672103312 1.0 9.235256553508643 -10.817530714933127 1.1031660071733487 1.0027863599999878 1.317105214511807 0.0 0.2543930627610136 0.6512713935186569 1.426474463263921 0.15376310781144842 0.039526143501719645 1.522191473988522e-11 10.817530714933127 0.3143188545118192 QTSGGPVDAS(ph)SEYQQELER ddPTM_A549_PD325901_60min_R1 2 QTSGGPVDASSEYQQELER 19 0 A8MUH2;P18859;P18859-2 A8MUH2 ATP5J ATP synthase-coupling factor 6, mitochondrial 1 QTS(0.001)GGPVDAS(0.473)S(0.473)EY(0.053)QQELER;QTSGGPVDAS(0.499)S(0.499)EY(0.003)QQELER 70.235 0.0011062000000000001 2222900.0 901.8900000000001 1264.63 742.3299999999999 1183.15 774.9000000000001 736.6999999999999 818.44 962.02 755.26 1195.72 932.9399999999999 True False 993.4492088636739 1371.2048083193708 792.7089777929206 1256.230488371391 720.4736972598745 730.7005594521063 849.5861820675524 942.8317564099102 723.5190486873981 1120.2220351371489 818.1942943939252 1.2141971847891804 1.6758914327740286 0.9688517546802464 1.5353694067274566 0.880565535834692 0.8930648434714035 1.0383672776609627 1.1523323529264033 0.8842875752676111 1.3691393875667999 1.0 9.676299666528562 -6.771798921872073 24.998623960171482 0.9594986539868772 1.34483376258851 0.2925373103568033 0.2202236850396398 116.72004511442408 281657.5940030634 0.02398884975847797 0.045686800713426054 1.6912237861658516e-07 6.771798921872073 0.3853351086016329 QTSS(ph)FLV ddPTM_A549_PD325901_60min_R1 1 QTSSFLV 7 0 A0A087WY82;Q9Y624-2;Q9Y624 A0A087WY82 F11R Junctional adhesion molecule A 1 QT(0.005)S(0.025)S(0.97)FLV 56.258 0.014511000000000001 1912900.0 1479.8 1640.3 1481.2 1827.6 1805.5 1780.4 1671.6 1527.0 1892.1 1790.4 2036.3 True False 1630.0282066288166 1778.5338376333502 1581.7231391791727 1940.4867012192494 1678.687908636861 1765.901012689739 1735.2136527346172 1496.542787091674 1812.58161695499 1677.3538384484243 1785.8480091692372 0.9127474444967426 0.9959043706416597 0.8856986322788903 1.0865911831555861 0.939994837196573 0.988830518399616 0.9716468836235539 0.838001206938016 1.014969699352068 0.9392478138319937 1.0 10.802393584746822 QTSS(ph)TPSSLALTSASR ddPTM_A549_PD325901_60min_R1 1 QTSSTPSSLALTSASR 16 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 QT(0.002)S(0.002)S(0.493)T(0.493)PS(0.008)S(0.002)LALTSASR 111.22 4.0532e-07 6420700.0 3329.9 3256.1 2582.0 2932.6 3500.7 3502.1 2475.0 3332.8 3575.0 3819.7 3978.7 True False 3667.94899665718 3530.502974283943 2757.2300468273174 3113.740041582166 3254.822908759377 3473.580058717552 2569.187479371966 3266.3246894689796 3424.7551823973854 3578.5234901259187 3489.3451230573332 1.0511854996571264 1.0117952938947317 0.7901855361362068 0.8923565688606734 0.932789046073932 0.9954819418017419 0.7362950320949815 0.9360853037681337 0.9814893802756448 1.0255573363836388 1.0 11.768740582881984 -8.721982270490287 4.362236833547126 0.99159621851511 0.9124552936549067 0.15291137680797018 0.08753363630035105 0.30221788532038224 12.506164104895628 0.01490761133822327 0.01659224625224233 1.8967833533542356e-09 8.721982270490287 -0.0791409248602033 QTSST(ph)PSSLALTSASR ddPTM_A549_PD325901_60min_R1 1 QTSSTPSSLALTSASR 16 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 QTSS(0.01)T(0.84)PS(0.117)S(0.033)LALTSASR 130.02 5.0795e-10 7427700.0 3503.4 3126.3 3000.4 3202.2 4097.9 3031.2 3325.4 3593.2 3637.6 3638.3 3947.4 True False 3859.062588933233 3389.7642727508046 3204.0251868709083 3399.9926212761434 3810.077640987533 3006.514912191156 3451.9499167287017 3521.5308071891295 3484.7243220947485 3408.5771170838375 3461.8948246302857 1.1147255432132785 0.9791644300207231 0.9255119953602529 0.9821189820921977 1.1005757927364046 0.8684593450964351 0.9971273223464707 1.0172263992928245 1.0065945092560404 0.9845986922632342 1.0 11.757346179704818 -8.000824550332387 24.999612024031315 1.0043984338873095 0.990192772153881 0.0 0.0656872883089243 178.29969785138059 5406261.455684687 0.009719391804731968 0.01331660066027728 9.98103203891987e-09 8.000824550332387 -0.01420566173342852 QTSYEAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 QTSYEASPR 9 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 QTSYEAS(1)PR 101.71 0.00072233 8802700.0 1414.5 1374.0 1262.0 1062.6 1761.9 1141.2 1356.4 1446.2 1920.6 1878.2 1855.8 True False 1653.2330187952773 1443.930731171497 1440.9705765517808 1322.937047701927 1502.7268439748175 1261.9610265327494 1602.8403224740134 1651.2032788017511 1485.5871665679738 1453.9133155334491 1394.953642525609 1.1851526591249621 1.0351101908714424 1.0329881457156216 0.9483734852340372 1.0772593426503274 0.9046616231976913 1.1490276620031752 1.1836976000236064 1.064972427240141 1.0422664031337212 1.0 10.446001463483803 -10.556841790999533 1.1489791718135893 1.003799250587575 1.0600756390444295 0.0285040753728818 0.08455154127534938 1.0626279550193614 2.7087773552742904 0.04011805029708547 0.01457081285123075 2.7743305806038975e-11 10.556841790999533 0.056276388456854454 QTSYEAS(ph)PR ddPTM_A549_PD325901_60min_R1 1 QTSYEASPR 9 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 QTSYEAS(1)PR 78.692 0.0018125 10648000.0 1448.8 1200.7 1355.2 1060.5 1394.2 1389.5 1365.1 1178.0 1137.9 1131.7 1384.1 True False 1595.8811094498117 1301.8872028570163 1447.1720214796208 1126.0046764297515 1296.27620172889 1378.1843726872576 1417.0496275113826 1154.503865876877 1090.0780201538414 1060.24426886287 1213.8644745328004 1.3147111089679466 1.0725144611865296 1.1922023025153754 0.9276197632055548 1.0678920331924278 1.1353692291041813 1.167387016624558 0.9510978285456698 0.8980228378241297 0.8734453401570578 1.0 10.245391641318411 -8.272921624257894 24.28853677259178 0.9504426067114383 1.1164879043713034 0.48796447198519044 0.09490258626979314 367.18618029218453 776711.8433144919 0.01522627909103327 0.018493212755982907 5.334311534231858e-09 8.272921624257894 0.1660452976598651 QTT(ph)PESDFNLQALR ddPTM_A549_MK2206_60min_R1 2 QTTPESDFNLQALR 14 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 QT(0.11)T(0.765)PES(0.125)DFNLQALR;QT(0.041)T(0.764)PES(0.195)DFNLQALR 56.568999999999996 0.014603 12346800.0 1708.87 1727.74 1546.13 1500.35 1997.42 1869.23 1520.1 1241.74 2755.7 2246.05 2530.1 True False 1997.2854781397577 1815.674586225796 1765.3944829825714 1867.9358173532712 1703.6021639662752 2067.030677905547 1796.2824935068923 1417.7604476692616 2131.5383499486425 1738.665745050528 1901.8063427923512 1.0502044467930516 0.9547105535256071 0.9282724761504942 0.9821903394278573 0.8957810927609694 1.0868775812739182 0.9445138829800503 0.7454809755170008 1.1207967404393995 0.9142180809522961 1.0 10.893154631534903 QTT(ph)PESDFNLQALR ddPTM_A549_PD325901_60min_R1 2 QTTPESDFNLQALR 14 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 QT(0.102)T(0.898)PESDFNLQALR;QT(0.015)T(0.971)PES(0.014)DFNLQALR 158.31 2.5993e-34 7964200.0 1774.2 1641.9 2014.3 1907.9 2240.1 2079.6 1924.5 2090.4 1758.1 2269.2 2329.1 True False 1954.3154779029908 1780.2686752485513 2151.002510969893 2025.746649844718 2082.7631039254675 2062.664427089181 1997.7379006268095 2048.705332112925 1684.2131709574376 2125.9223247359064 2042.6354653813635 0.9567617477639931 0.871554766095365 1.0530525624494125 0.9917318504339724 1.019645031736787 1.0098054508732806 0.9780197859503181 1.0029715858920663 0.8245294862943116 1.040774215843253 1.0 10.99621604418518 QTT(ph)WAGR ddPTM_A549_MK2206_60min_R1 1 QTTWAGR 7 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 QT(0.049)T(0.951)WAGR 84.615 0.014811000000000001 8430200.0 2073.4 2020.8 1454.4 1258.0 3003.3 2039.7 1986.1 2003.0 2856.5 3034.1 3134.8 True False 2423.339230236924 2123.6500884653283 1660.6557896488973 1566.210056473765 2561.5185484474528 2255.5397001567185 2346.9486615051896 2286.9313839302345 2209.5073108931665 2348.694702726034 2356.3426439213727 1.0284324465664538 0.9012484215501008 0.7047598930201726 0.6646783991768334 1.0870738833570617 0.9572205918249223 0.9960133207110534 0.9705427985313606 0.9376850674043542 0.9967543170280995 1.0 11.202333626353061 -6.772372118191793 24.99961596834098 0.9775896020300477 0.8216689629475148 0.4047697074773219 0.09660160618911987 174.93527596812675 400020.44588393037 0.014140381497891326 0.0269070735026012 1.688993125067391e-07 6.772372118191793 -0.15592063908253295 QTT(ph)WAGR ddPTM_A549_PD325901_60min_R1 1 QTTWAGR 7 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 QT(0.021)T(0.979)WAGR 84.615 0.014811000000000001 7566400.0 3137.5 2686.4 3488.8 2225.0 3179.0 2662.9 2404.3 2289.3 3376.4 3585.6 3689.9 True False 3456.0166902945775 2912.7923559216206 3725.5709478586937 2362.4331966583645 2955.7180069546284 2641.2142252816802 2495.7969521834434 2243.638115578894 3234.5016497472825 3359.204604077674 3236.065692203298 1.0679686443390846 0.9001029747138494 1.151265549656414 0.7300325213886141 0.913367739745174 0.8161806577799695 0.7712442173830416 0.6933227965626672 0.9995166839598516 1.0380520433102012 1.0 11.660025179467667 -8.915127052051263 24.982340828391262 0.9998220436255245 0.8782959897868899 0.16857948246277943 0.12974490312424908 33.40927925084256 9829.65794835911 0.022289554350553645 0.023728990061509407 1.2158302597087618e-09 8.915127052051263 -0.12152605383863457 QTTFLGS(ph)PGPR ddPTM_A549_MK2206_60min_R1 2 QTTFLGSPGPR 11 0 Q9H0X9-3;Q9H0X9-2;Q9H0X9;E9PNH0;H0YCD7 Q9H0X9-3 OSBPL5 Oxysterol-binding protein-related protein 5;Oxysterol-binding protein 1 QTTFLGS(1)PGPR;QTTFLGS(0.999)PGPR 94.023 0.00028879999999999997 31292000.0 7657.0 8986.8 8102.2 8620.5 10359.8 7562.9 7835.9 9067.599999999999 11643.3 13414.3 13599.599999999999 True False 8949.314404323395 9444.189734273667 9251.213791868331 10732.52288698895 8835.887143544076 8363.201058153285 9259.581600467503 10352.960068360362 9006.111140529463 10384.000313364044 10222.44399013432 0.8754574163439172 0.9238680831500035 0.9049904113729239 1.049897939998195 0.864361511989852 0.8181214850601882 0.905808983585914 1.0127676002286736 0.8810134982614002 1.0158040800600758 1.0 13.319452537754708 -10.96098240100767 1.0883361824029627 1.002615873382238 0.9139160638365653 0.24253242196634806 0.06259093229786078 0.7271095627034265 1.4531612465056374 0.05153833201170131 0.01056387475782701 1.0940006977582041e-11 10.96098240100767 -0.08869980954567258 QTTFLGS(ph)PGPR ddPTM_A549_PD325901_60min_R1 2 QTTFLGSPGPR 11 0 Q9H0X9-3;Q9H0X9-2;Q9H0X9;E9PNH0;H0YCD7 Q9H0X9-3 OSBPL5 Oxysterol-binding protein-related protein 5;Oxysterol-binding protein 1 QTTFLGS(1)PGPR;QTTFLGS(1)PGPR 107.39 0.00013961 39133000.0 10586.8 11067.6 11088.7 9787.5 12780.8 10255.3 11579.7 12347.5 11608.599999999999 12565.400000000001 13400.599999999999 True False 11661.56414240975 12000.30549374557 11841.245863769973 10392.051645974727 11883.120699366373 10171.784236933881 12020.37182015498 12101.219426073634 11120.73091199392 11772.018499575415 11752.41115340239 0.9922699257363593 1.0210930622752603 1.00755884977202 0.8842484755110162 1.0111219344062976 0.8655061590479747 1.0228004843648628 1.0296797200266654 0.9462510089918361 1.0016683679559109 1.0 13.520669153547997 -5.91589507478504 0.0010313373493247254 1.8487241996659052 0.09746166839227571 0.0 0.054120781451548854 3124129.340852241 607.4666148376837 512721.9921056188 518800.1115660244 1.2136820396997543e-06 5.91589507478504 -1.7512625312736294 QTVAVGVIK ddPTM_A549_MK2206_60min_R1 2 QTVAVGVIK 9 0 Q5VTE0;P68104;A0A087WVQ9;A0A2U3TZH3;Q05639 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 0 ; 123.88 0.00026176 52286000.0 8982.0 10106.7 11644.3 9532.400000000001 14302.5 10594.4 11152.3 9947.5 14869.3 13265.2 13814.6 False True 10497.942011183586 10621.087860794018 13295.636834026855 11867.838427925693 12198.621196407186 11715.492376006445 13178.528552290578 11357.58858794109 11501.427291392873 10268.582106918486 10384.05355643619 1.0109676297534893 1.022826760577608 1.280389855634558 1.1428907182946713 1.1747455971898662 1.1282195640010937 1.2691121516916994 1.0937528900649294 1.107604773885639 0.9888799254655102 1.0 13.342082108812471 -9.92811482393036 0.7247799236995105 1.0072967859864663 1.1447388629198987 0.31519847089135455 0.08061626743535003 0.5897065103223402 0.6328522182577238 0.03889104160295931 0.017476605916392277 1.180008609721617e-10 9.92811482393036 0.13744207693343236 QTVAVGVIK ddPTM_A549_PD325901_60min_R1 2 QTVAVGVIK 9 0 Q5VTE0;P68104;A0A087WVQ9;A0A2U3TZH3;Q05639 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 0 ; 134.25 0.00012839 98037000.0 16318.5 17196.4 19429.4 17758.800000000003 22338.0 18095.5 20858.0 21245.7 21621.0 19135.4 18386.9 False True 17975.142106955234 18645.600978771046 20747.99592247355 18855.72074283891 20769.05594191647 17948.136247543905 21651.76260393554 20821.937846570767 20712.34455905283 17927.1875783322 16125.427864162397 1.114707917109207 1.1562856586403858 1.2866632809529648 1.1693159959336268 1.2879692940163283 1.1130331795680501 1.3427093399521524 1.2912487049628014 1.2844524023504844 1.1117340717621567 1.0 13.977049820352995 -10.795144528429457 1.0372821263195995 0.9997263954168971 1.231547775886423 0.37486662369033175 0.08133135556039983 0.30913910107751486 0.5894233391248164 0.052180402342479636 0.013011790928536365 1.602711937016887e-11 10.795144528429457 0.23182138046952594 QTYSTEPNNLK ddPTM_A549_MK2206_60min_R1 2 QTYSTEPNNLK 11 0 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5;H0YLP6 P46779 RPL28 60S ribosomal protein L28 0 ; 133.07 1.9194000000000004e-07 5766700.0 4016.6000000000004 4316.3 3794.5 3731.1 5167.700000000001 4021.5 3980.2 4108.5 6100.8 5805.7 5781.4 False True 4694.503883558227 4535.981233592093 4332.617157468881 4645.219667495444 4407.538175610794 4447.052460744346 4703.3508194567 4690.892456753554 4718.978540975681 4494.188337766237 4345.718821477291 1.0802594637179883 1.0437815744485106 0.9969851560704618 1.0689185974338624 1.0142253460642645 1.0233180386099179 1.082295245659229 1.079428432776266 1.085891364543347 1.0341645473138261 1.0 12.085379116341095 QTYSTEPNNLK ddPTM_A549_PD325901_60min_R1 2 QTYSTEPNNLK 11 0 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5;H0YLP6 P46779 RPL28 60S ribosomal protein L28 0 ; 174.1 8.2351e-15 9178600.0 5927.1 6112.799999999999 6899.1 6339.0 8270.0 6986.9 7154.3 7646.5 7683.8 8353.2 8998.1 False True 6528.8148286996 6627.947108873467 7367.314413658538 6730.545633086463 7689.143729951172 6930.001002899311 7426.560801483181 7493.9845589367915 7360.876607134274 7825.777526433974 7891.39074365551 0.8273338681079265 0.839895947897673 0.9335888505561182 0.8528972714343996 0.9743711824348654 0.8781723308367244 0.9410965750813897 0.9496405389584562 0.9327730492945421 0.9916854684614005 1.0 12.946063861474126 -2.0000000000002056 0.11385560194560812 1.02757472123867 0.4501033843364269 0.661968115633875 0.03391154560287979 38.525665503389845 0.29396474440613884 0.13577665851876086 3.5275147671855316 0.009999999999995266 2.0000000000002056 -0.5774713369022433 QTYTRYQT(ph)LELEKEFHFNRYLT(ph)R ddPTM_A549_PD325901_60min_R1 1 QTYTRYQTLELEKEFHFNRYLTR 23 3 P31268;P31267 P31268 HOXA7;HOXA6 Homeobox protein Hox-A7;Homeobox protein Hox-A6 2 QT(0.16)Y(0.181)T(0.193)RY(0.181)QT(0.286)LELEKEFHFNRY(0.002)LT(0.997)R 49.086999999999996 0.0079483 13505000.0 926.11 1317.1 1320.9 1197.5 1188.8 1350.9 839.4 1207.7 1298.4 1329.0 1586.7 True False 1020.1280054338522 1428.0966393628514 1410.544217216964 1271.4668552801772 1105.3027891373579 1339.898718289467 871.3438263373043 1183.611476077678 1243.832763307626 1245.0867131914406 1391.5459589200173 0.7330896970342082 1.026266240226231 1.0136526272633433 0.9137081295302429 0.7942984434342265 0.9628849911140314 0.6261696358297477 0.8505730396402301 0.8938495745213965 0.8947506945137161 1.0 10.442472842351407 -10.120803355415779 0.9715644463650155 0.9892851527505131 0.8730387450577315 0.04156832806135757 0.116667409487062 0.7263040366089857 1.370140548125894 0.04553729271102076 0.021606112911597093 7.571756596542593e-11 10.120803355415779 -0.1162464076927816 QVAAS(ph)PAVGQPLQK ddPTM_A549_MK2206_60min_R1 1 QVAASPAVGQPLQK 14 0 A0A2R8YD63;Q92547 A0A2R8YD63 TOPBP1 DNA topoisomerase 2-binding protein 1 1 QVAAS(1)PAVGQPLQK 66.533 0.004171500000000001 2260600.0 2012.3 1838.4 2113.0 1797.1 2326.0 2204.5 1926.1 1714.9 3414.1 2306.9 3251.6 True False 2351.927043988504 1931.9667075587204 2412.6551729428784 2237.3895806748847 1983.8484812335678 2437.7787267713334 2276.0474381577683 1957.992326660989 2640.811801197395 1785.7696877883686 2444.137980405362 0.9622726142484128 0.7904491166404207 0.9871190547690509 0.9154105040762928 0.811676139865289 0.9973981609528549 0.9312270650858606 0.801097295798437 1.080467560493215 0.7306337457643031 1.0 11.25511001745683 -8.776862810838582 24.999960190361975 1.0379985763104531 0.9007743207422402 0.0 0.1165728572295125 155.85023340858373 252617.94786260132 0.011998355815228368 0.012795861740858358 1.671618578038385e-09 8.776862810838582 -0.13722425556821294 QVAAS(ph)PAVGQPLQK ddPTM_A549_PD325901_60min_R1 2 QVAASPAVGQPLQK 14 0 A0A2R8YD63;Q92547 A0A2R8YD63 TOPBP1 DNA topoisomerase 2-binding protein 1 1 QVAAS(1)PAVGQPLQK;QVAAS(1)PAVGQPLQK 146.0 2.6758e-21 3084700.0 3669.6 4810.7 3915.2 3823.1 5376.4 4329.7 3665.0 4441.2 5680.3 5391.9 5039.9 True False 4042.1350905832614 5216.11457215312 4180.90901601019 4059.244204109929 4998.78021157309 4294.4403587074585 3804.473580564954 4352.616781946001 5441.576744775346 5051.454513812588 4420.024250558385 0.9145051840094804 1.180109944304981 0.9459018274576236 0.9183760029364368 1.130939544266435 0.9715875106714491 0.8607359066150672 0.984749525162929 1.231119205757278 1.1428567418322273 1.0 12.109838569677967 -8.682833139543769 24.999929978008634 1.1091428088265232 0.9909448626917491 0.2588714808468857 0.10171918122449973 41.892717693262526 13321.519059286702 0.019742715864677404 0.022386132511882283 2.075710873972131e-09 8.682833139543769 -0.11819794613477408 QVAEQGGDLS(ph)PAANR ddPTM_A549_MK2206_60min_R1 4 QVAEQGGDLSPAANR 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR 265.73 1.5420999999999997e-90 299134900.0 8372.199999999999 9769.8 9180.6 8056.400000000001 11614.4 8561.0 7565.4 9419.8 12532.2 13543.400000000001 13322.3 True False 9785.22267936219 10267.041089810262 10482.5471276476 10030.218361665537 9905.937145502648 9466.919337668123 8939.935251876215 10755.085496927622 9693.67670981108 10483.936533700202 10014.00523322499 0.9771537413318166 1.025268196959368 1.0467886608315378 1.0016190453333051 0.9892083052479553 0.9453679239409905 0.8927432174905232 1.074004381507994 0.9680119476719357 1.046927407119386 1.0 13.289731494022817 -6.651102236568466 3.467257449303048 0.9814824517539384 1.0180166593194484 0.051694736551701426 0.04785198120635535 0.3940127260578813 9.22725445177735 0.006188102577750177 0.013527831852928255 2.233046483054809e-07 6.651102236568466 0.03653420756550996 QVAEQGGDLS(ph)PAANR ddPTM_A549_PD325901_60min_R1 2 QVAEQGGDLSPAANR 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR 236.78 2.0870999999999995e-64 379770000.0 5557.2 5323.0 4385.2 4732.9 5611.7 5162.0 5270.9 5045.1 5137.6 5434.5 5881.2 True False 6121.362853005586 5771.587891070122 4682.806042349787 5025.240483804215 5217.553551314026 5119.962383455644 5471.486983847154 4944.471522695615 4921.684538485259 5091.36474254243 5157.849683998491 1.1868052052769704 1.1189910999104276 0.9078988976506119 0.9742898284520238 1.0115753406891166 0.9926544387944483 1.0608077627430048 0.9586304032928971 0.9542124800096634 0.987109949779591 1.0 12.332554013719825 -5.602243294900634 5.358363681560014 0.9817249749934777 1.1714178495463292 0.7673814357260225 0.036768954652871236 0.061227219067296904 2.940565076317032 0.005158484676610734 0.021301085020359347 2.4989450424649017e-06 5.602243294900634 0.18969287455285155 QVAGDAPVEQATAET(ph)ASPVHR ddPTM_A549_PD325901_60min_R1 1 QVAGDAPVEQATAETASPVHR 21 0 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 QVAGDAPVEQAT(0.001)AET(0.583)AS(0.416)PVHR 104.6 8.2024e-10 23733000.0 4403.5 6349.6 6325.7 5560.5 5677.2 6831.0 5871.1 6744.5 6577.3 7336.8 7947.7 True False 4850.540078314632 6884.703075923139 6755.000041524226 5903.95945618824 5278.45305727676 6775.370600810831 6094.5279232891935 6609.975656542105 6300.878954176874 6873.553195893881 6970.183284621299 0.6958984979658493 0.9877363040242055 0.9691280366225312 0.8470307329241216 0.757290424331151 0.9720505651206771 0.8743712574583064 0.948321641860704 0.9039760788039608 0.9861366502455368 1.0 12.766980877676533 -14.999999999999883 0.12564362648710878 1.3884750384610436 0.8346043295599562 0.24196437061834375 0.08415289964144076 86.0297185062016 0.7454583325085011 8.391324215914752 0.2694596431191162 1.0000000000002699e-15 14.999999999999883 -0.5538707089010874 QVAGDAPVEQATAETAS(ph)PVHR ddPTM_A549_MK2206_60min_R1 3 QVAGDAPVEQATAETASPVHR 21 0 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 QVAGDAPVEQAT(0.001)AET(0.292)AS(0.707)PVHR;QVAGDAPVEQAT(0.004)AET(0.342)AS(0.654)PVHR;QVAGDAPVEQATAET(0.117)AS(0.883)PVHR 115.45 4.5463e-15 25596700.0 1537.3000000000002 2144.67 1646.95 1710.15 2291.17 1876.74 1669.33 1749.93 2412.27 2355.43 2642.19 True False 1796.7586566235293 2253.82454237378 1880.5122750015496 2129.136826771551 1954.1419280945472 2075.3353811208117 1972.6256528424829 1997.9879364358642 1865.8946966036256 1823.3367270828194 1986.0613022657285 0.9046843894363986 1.1348212362843901 0.9468551010264552 1.0720398329812881 0.9839283036556993 1.0449503138464247 0.9932350278372989 1.0060051692042584 0.9394950168330579 0.9180666905914382 1.0 10.955694438802208 -8.589756011828394 8.407386021731673 0.971419475663448 1.0151416556357191 0.131489146131614 0.06138609201226312 0.4396866976459596 49.875266211612555 0.009098158649184434 0.010318630587753357 2.5718402458991625e-09 8.589756011828394 0.043722179972271125 QVAGDAPVEQATAETAS(ph)PVHR ddPTM_A549_PD325901_60min_R1 2 QVAGDAPVEQATAETASPVHR 21 0 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 QVAGDAPVEQATAET(0.143)AS(0.857)PVHR;QVAGDAPVEQAT(0.021)AET(0.316)AS(0.664)PVHR 101.73 3.7265e-10 4900500.0 1131.17 882.0699999999999 1115.8400000000001 1305.92 1382.3899999999999 1247.6399999999999 1211.62 1259.45 1298.92 1464.01 1422.42 True False 1246.0055456766584 956.4051345249337 1191.5676124910128 1386.5837124404907 1285.295695386602 1237.479633493723 1257.7288621239038 1234.3292817305892 1244.3309095159746 1371.5721587504897 1247.4713574632951 0.9988249735932876 0.766675025284558 0.9551863498606001 1.1115154701908967 1.0303208067239489 0.9919904181288057 1.0082226374170764 0.9894650280713218 0.9974825490553093 1.0994818843292329 1.0 10.284790975639412 -5.993085954642203 24.98369384521081 1.0075160305396684 0.8772951357680722 0.4038275141217199 0.06572982852902408 105.63497130188017 381700.20611703047 0.007243299590921934 0.022452428730909968 1.0160475789887474e-06 5.993085954642203 -0.13022089477159626 QVAGDAPVEQATAETAS(ph)PVHREEHGR ddPTM_A549_MK2206_60min_R1 2 QVAGDAPVEQATAETASPVHREEHGR 26 1 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 QVAGDAPVEQAT(0.001)AET(0.025)AS(0.974)PVHREEHGR;QVAGDAPVEQAT(0.004)AET(0.041)AS(0.956)PVHREEHGR 125.47 3.3569999999999995e-18 21388000.0 747.84 1121.31 882.3 745.88 1283.68 757.4200000000001 816.84 951.34 1362.64 1439.75 1775.31 True False 874.0571090674172 1178.3798894977529 1007.4234070456697 928.6206334838256 1094.852372480614 837.5696816652946 965.2492546517793 1086.1953583565603 1054.0042156889422 1114.5094750501983 1334.4515309365984 0.6549935226601683 0.8830443535635161 0.7549344308808273 0.6958818750292592 0.8204512094284763 0.6276508829642077 0.7233303213150869 0.8139638894147043 0.7898407632304026 0.8351816826707588 1.0 10.382031190481198 -10.304512625858486 0.5446790529073053 1.01997362792541 0.7434156293050366 0.3217361680424796 0.08408627888304536 0.4922010967329966 0.24893981450738964 0.06567806564514972 0.01635062364238748 4.9600650722887066e-11 10.304512625858486 -0.27655799862037334 QVAGDAPVEQATAETAS(ph)PVHREEHGR ddPTM_A549_PD325901_60min_R1 2 QVAGDAPVEQATAETASPVHREEHGR 26 1 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 QVAGDAPVEQATAET(0.05)AS(0.949)PVHREEHGR;QVAGDAPVEQATAET(0.035)AS(0.965)PVHREEHGR 163.92 2.3786999999999995e-41 21490900.0 619.21 811.31 897.4599999999999 956.4499999999999 764.5699999999999 1133.03 727.98 1134.72 779.89 961.48 837.1 True False 682.0717433616904 879.6819409926925 958.3670324653921 1015.5277442444461 710.8692408233087 1123.8029793348992 755.6836772659412 1112.087119429381 747.1139354405307 900.7719887127965 734.1420068141086 0.9290733087480133 1.198244934668935 1.3054245957459008 1.383285161206675 0.9682993674591722 1.5307705715026005 1.0293426479507897 1.5148119970077825 1.0176695087680858 1.2269724118114387 1.0 9.519915343729755 -8.946315837324535 24.999893084702837 1.0077943854209785 1.2351754485512692 0.06915618927762723 0.2020793347686822 91.14944268446591 42446.85324816918 0.029747119000270564 0.03166627609550312 1.1315771331537247e-09 8.946315837324535 0.2273810631302906 QVAPEKPVKK ddPTM_A549_PD325901_60min_R1 1 QVAPEKPVKK 10 2 P53999;D6RC37;D6R970 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 0 58.676 0.0035708 3445700.0 3058.4 3369.1 3029.9 2626.1 3814.4 3597.8 3326.3 3490.1 3924.6 3736.0 3537.2 False True 3368.8865165249167 3653.0258808574763 3235.527234268819 2788.308232694174 3546.4897029656263 3568.5007096467893 3452.8841667212023 3420.4872175695177 3759.662710164135 3500.10832241025 3102.146824158241 1.085985515027663 1.1775799431571763 1.0429961628740028 0.8988318060834447 1.1432372173189953 1.1503326283130044 1.1130627795665773 1.1026193831098428 1.2119551147242391 1.1282858358453083 1.0 11.59905125519861 QVAQQEAER ddPTM_A549_MK2206_60min_R1 1 QVAQQEAER 9 0 P35232;C9JZ20;E7ESE2;E9PCW0;C9JW96 P35232 PHB Prohibitin 0 72.643 0.0070839 2160300.0 884.32 936.87 936.59 896.65 949.68 799.85 499.26 898.45 1130.7 999.32 1357.2 False True 1033.571596451778 984.5526813046873 1069.4125453982826 1116.3292902521487 809.983330033489 884.4895961025403 589.9690794738838 1025.808038887728 874.5982553568717 773.5729179421177 1020.1697831855571 1.0131368459320298 0.9650870840639362 1.048269183251989 1.0942583368489176 0.7939691445322512 0.8670023467472785 0.5783047971011853 1.0055267817132996 0.8573065677615668 0.7582786029268362 1.0 9.99459355938436 -6.751853831972926 24.999515312778428 0.8964761774950475 1.0268293234134394 0.2985404050671957 0.12242156942064554 260.6895655517136 679884.2475798657 0.017754823227896937 0.036586813850644065 1.7707048141019549e-07 6.751853831972926 0.13035314591839187 QVAQQEAER ddPTM_A549_PD325901_60min_R1 2 QVAQQEAER 9 0 P35232;C9JZ20;E7ESE2;E9PCW0;C9JW96 P35232 PHB Prohibitin 0 ; 86.898 0.0032196 7185900.0 3150.7 3241.8 3278.2999999999997 3054.5 4358.1 3308.8 3940.7000000000003 3028.9 3465.8 3772.8 3961.2 False True 3470.556744577249 3514.997863098088 3500.7851520193603 3243.169527727182 4052.002090628802 3281.8542298291436 4090.6654949337812 2968.486213373917 3320.1444786441575 3534.5847641299247 3473.997512115695 0.9990095653418155 1.011802066880993 1.0077108978375036 0.933555512465541 1.1663802511364199 0.9446910132731977 1.177509621313036 0.8544871442829799 0.9557129695876381 1.0174402116878118 1.0 11.762381005532605 -8.282127262275223 24.999607993060845 0.9691573817863922 1.0302352741084615 0.16195237623730918 0.08275082525836706 1297.3582497773598 1567747.5818845201 0.012415421996359853 0.015018049380719692 5.222431325116083e-09 8.282127262275223 0.06107789232206928 QVAQQEAQR ddPTM_A549_MK2206_60min_R1 2 QVAQQEAQR 9 0 Q99623;F5GWA7;F5GY37;J3KPX7 Q99623 PHB2 Prohibitin-2 0 ; 78.556 0.0050506 4448000.0 967.78 1230.93 1185.71 1039.6100000000001 1187.41 1108.01 898.48 757.3 1428.99 1395.8899999999999 1477.55 False True 1131.1176040506857 1293.579079272876 1353.8615073876479 1294.314496669867 1012.7435619525163 1225.258882762488 1061.7221858865028 864.6495941339828 1105.326046628121 1080.5574795122907 1110.6335566945327 1.0184435696478662 1.1647217675673565 1.2189992812904107 1.1653839278204463 0.9118611227330853 1.1032071517892033 0.9559608382862121 0.7785192414925339 0.9952211870113057 0.9729198915331224 1.0 10.117167175966769 -6.750210628957171 24.998437100312614 0.980775262459973 1.149026232533856 0.4904297235490527 0.08757540647596546 153.93507515373625 342701.46817396086 0.012461663954544582 0.025756413279138374 1.7774171694635945e-07 6.750210628957171 0.168250970073883 QVAQQEAQR ddPTM_A549_PD325901_60min_R1 1 QVAQQEAQR 9 0 Q99623;F5GWA7;F5GY37;J3KPX7 Q99623 PHB2 Prohibitin-2 0 111.46 3.3084e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QVDGDNS(ph)HVEMK ddPTM_A549_MK2206_60min_R1 2 QVDGDNSHVEMK 12 0 F8WBE5;P02786 F8WBE5 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form 1 QVDGDNS(1)HVEMK;QVDGDNS(1)HVEMK 59.861999999999995 0.0022202 35582000.0 2214.5 2341.8999999999996 2364.88 2400.9 3164.1000000000004 2579.3500000000004 2113.8 2391.3 3410.2 3440.3 4077.1000000000004 True False 2588.253460673131 2461.0927069363397 2700.255544434051 2989.120607780496 2698.6650814579266 2852.295104966042 2497.8500985296155 2730.2740980491126 2637.795144970374 2663.133840607882 3064.643547764393 0.844552855930413 0.8030600194047579 0.8810993847567828 0.975356696853378 0.8805804131532876 0.930710231226318 0.8150540379652818 0.8908945055097198 0.8607184176099704 0.8689864903050778 1.0 11.581503566807156 -10.742879818243456 0.8320329700017364 1.005942989590629 0.8761644447336893 0.0 0.05992773265924853 0.48497397329646563 0.5518471061174525 0.041072072699896614 0.008812175765910061 1.80767429219755e-11 10.742879818243456 -0.12977854485693985 QVDGDNS(ph)HVEMK ddPTM_A549_PD325901_60min_R1 2 QVDGDNSHVEMK 12 0 F8WBE5;P02786 F8WBE5 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form 1 QVDGDNS(1)HVEMK;QVDGDNS(1)HVEMK 66.673 0.0012661 46161000.0 10458.9 10965.599999999999 11719.0 11825.2 14159.0 11754.8 11273.2 12050.3 11435.099999999999 13623.3 12912.0 True False 11520.679828564756 11889.70959577655 12514.321812071783 12555.615747022248 13164.52068589826 11659.072806091519 11702.207794931737 11809.947313222528 10954.522513631417 12763.122513033079 11323.90585591181 1.0173768640570442 1.049965422449124 1.1051241480905194 1.1087707639734046 1.1625423995401314 1.0295981752625336 1.0334073723177795 1.0429217147771477 0.9673802178346838 1.1270954276231382 1.0 13.467084039754056 -8.095120457960176 1.3066294180506186 0.985714997552062 1.0854292968047332 0.0 0.05813691311071634 0.2435324589648766 0.8218981993137224 0.0074949630623273355 0.01046871468568925 8.033032833062843e-09 8.095120457960176 0.09971429925267117 QVDHENDDADREDEEHS(ph)QEDRER ddPTM_A549_MK2206_60min_R1 1 QVDHENDDADREDEEHSQEDRER 23 2 Q8TDJ6;Q8TDJ6-3;Q8TDJ6-2 Q8TDJ6 DMXL2 DmX-like protein 2 1 QVDHENDDADREDEEHS(1)QEDRER 44.81100000000001 0.0071691 940340.0 163.69 0.0 213.48 142.56 296.96 211.51 321.57 170.77 177.17 312.64 170.49 True False 191.31687016373206 0.0 243.75467407470214 177.4872063997616 253.2775773805333 233.89184781102492 379.99510653049884 194.97717046119132 137.04127788235328 242.01440686209003 128.15262771537402 1.492882928539283 0.0 1.9020653608139768 1.384967359342481 1.9763744364497995 1.8251037999041024 2.9651760818706348 1.5214449671233747 1.0693598744359802 1.8884857156390278 1.0 7.001719250558506 -5.774196866012235 24.99976352396369 1.377448961846363 0.7464410585782866 0.08728580124582597 0.6734507207164949 352.7019896758302 691164.6570755455 0.10089349228772464 0.31661673700618526 1.681911476517972e-06 5.774196866012235 -0.6310079032680764 QVDHENDDADREDEEHS(ph)QEDRER ddPTM_A549_PD325901_60min_R1 2 QVDHENDDADREDEEHSQEDRER 23 2 Q8TDJ6;Q8TDJ6-3;Q8TDJ6-2 Q8TDJ6 DMXL2 DmX-like protein 2 1 QVDHENDDADREDEEHS(1)QEDRER;QVDHENDDADREDEEHS(1)QEDRER 104.87 8.6456e-11 42068000.0 0.0 274.07 0.0 289.87 200.53 143.26 399.49 185.21 107.41 103.97 196.8 True False 0.0 297.1668407487488 0.0 307.77461155746533 186.44546459094417 142.09333805770166 414.69281055931583 181.51584125556576 102.89593122833654 97.40531645636881 172.59484761798655 0.0 1.7217596286911425 0.0 1.7832201586844552 1.0802493073467287 0.823276824417172 2.4026951921367763 1.0516874852331892 0.5961703529880662 0.5643581937739024 1.0 7.431245586928152 -6.251944427657861 24.971302698864942 1.0091493287569673 0.6887039968332651 0.09612333572385479 0.6719628067936734 1922.2025340309062 5055295.112191084 0.08998636872350838 0.2346334912347716 5.598292326867452e-07 6.251944427657861 -0.32044533192370217 QVDLESNPQNRS(ph)PESR ddPTM_A549_MK2206_60min_R1 2 QVDLESNPQNRSPESR 16 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QVDLESNPQNRS(0.999)PES(0.001)R;QVDLESNPQNRS(1)PESR 201.52 5.3141e-40 42193000.0 5399.799999999999 4843.3 4284.2 6358.200000000001 6661.2 4186.1 4771.2 5279.3 6857.3 6877.4 6034.8 True False 6311.154227565036 5089.803282593097 4891.763981032598 7915.959285430443 5681.346304038279 4629.070323491713 5638.065280586856 6027.6569421781805 5304.132498857939 5323.790563438257 4536.192607993076 1.3912888567483572 1.122043026485366 1.0783854222620488 1.745066836774521 1.2524482082236468 1.020474817434996 1.242906941528939 1.328792108949925 1.1692917292602834 1.1736253337341496 1.0 12.147266183473324 -9.81896124318939 0.41534195876794094 0.9720622180408316 1.289409213606758 0.10195090125138218 0.18953984109453817 1.425421876424255 0.5013681040553136 0.18492859015011964 0.06612409015773822 1.5171857563712602e-10 9.81896124318939 0.3173469955659265 QVDLESNPQNRS(ph)PESR ddPTM_A549_PD325901_60min_R1 2 QVDLESNPQNRSPESR 16 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QVDLESNPQNRS(0.998)PES(0.002)R;QVDLESNPQNRS(0.997)PES(0.003)R 185.23 1.1743999999999999e-34 55078000.0 8951.9 9852.8 10176.5 9517.7 11949.5 9805.3 10411.9 10049.3 11830.9 12272.3 11213.900000000001 True False 9860.690297959527 10683.130034404614 10867.138486265763 10105.586712734974 11110.208343537068 9725.448887736848 10808.130552110297 9848.858827976657 11333.688416063 11497.424883596183 9834.661390769004 1.0026466500631077 1.08627329502488 1.1049834920057198 1.027548007114944 1.1296991225305748 0.9888951435445794 1.0989834954821127 1.001443612204176 1.1524228405770034 1.169071758219137 1.0 13.26365966576091 QVDLESNPQNRS(ph)PESRPSVVYPSTK ddPTM_A549_MK2206_60min_R1 3 QVDLESNPQNRSPESRPSVVYPSTK 25 2 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QVDLES(0.001)NPQNRS(0.972)PES(0.028)RPSVVYPSTK;QVDLES(0.027)NPQNRS(0.947)PES(0.025)RPS(0.001)VVYPSTK;QVDLES(0.042)NPQNRS(0.915)PES(0.042)RPSVVYPSTK 159.75 3.9579999999999996e-41 66178000.0 3944.3999999999996 3981.1 3594.3999999999996 3649.5 5818.5 3988.6000000000004 4073.3 3369.4 6032.5 5690.0 5830.4 True False 4610.11828867875 4183.720985347051 4104.139968587735 4543.627663832281 4962.606357720344 4410.671004581601 4813.365884350781 3847.0227683547346 4666.148381922994 4404.625048123372 4382.550769146088 1.0519258147868535 0.9546314933305889 0.9364728864025004 1.0367541423182594 1.1323557031347924 1.006416408369638 1.0983023672509866 0.877804495828876 1.064710628060143 1.0050368564199395 1.0 12.097555088475433 -6.292276125868567 23.703863643452774 1.030974462369753 0.9783721908685066 0.08589253212931902 0.06701991586162998 574.245551522556 441415.4652802533 0.009041091493787222 0.02101292579374411 5.101805223701851e-07 6.292276125868567 -0.05260227150124641 QVDLESNPQNRS(ph)PESRPSVVYPSTK ddPTM_A549_PD325901_60min_R1 2 QVDLESNPQNRSPESRPSVVYPSTK 25 2 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QVDLES(0.004)NPQNRS(0.957)PES(0.039)RPSVVYPSTK;QVDLES(0.008)NPQNRS(0.758)PES(0.22)RPS(0.015)VVYPSTK 140.38 5.209299999999999e-26 215520000.0 11826.4 12959.7 12297.400000000001 12477.1 15358.900000000001 13913.3 12055.6 12984.0 13716.1 15255.1 14185.6 True False 13027.007421864473 14051.859401071102 13131.975514273523 13247.782129449926 14280.143849328537 13799.994697739921 12514.382455077446 12725.023934249051 13139.660016022599 14291.890382548356 12440.86112992739 1.0471146077281632 1.1294925049254299 1.055551973221822 1.0648605422964998 1.1478420746114286 1.1092475475466113 1.0059096652862072 1.0228410880367507 1.0561696556851838 1.1487862643340805 1.0 13.602798728754177 -7.75942821553557 24.98783546683355 1.025457888539412 1.0936397697241307 0.1152108295404145 0.04871122417890412 34.88920397571592 433477.77300917124 0.005263546586711156 0.007590163932338942 1.7400902935115367e-08 7.75942821553557 0.06818188118471857 QVDLESNPQNRSPES(ph)RPSVVYPSTK ddPTM_A549_PD325901_60min_R1 1 QVDLESNPQNRSPESRPSVVYPSTK 25 2 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QVDLES(0.007)NPQNRS(0.342)PES(0.649)RPS(0.002)VVYPSTK 158.12 7.668899999999999e-41 13483000.0 2287.8 2176.2 1496.9 2221.7 2870.7 2138.3 2332.6 2706.4 2746.6 2590.5 2984.1 True False 2520.0557718106556 2359.596011374565 1598.4886355909405 2358.9293631532096 2669.0719353773657 2120.8863937511055 2421.368369447698 2652.4187288702715 2631.1699535587854 2426.9353879025043 2617.0746177684646 0.9629285136544806 0.9016158711540876 0.6107921511821259 0.9013611408468853 1.0198684887530025 0.8104034861488014 0.9252194618403193 1.0135051980795047 1.0053859128412395 0.9273466531771689 1.0 11.353739343610453 -8.065902349909628 3.7732761230620824 1.0031701094875263 0.8658455429964883 0.2281453831397141 0.09998843280318687 0.22437008194589797 6.27814101948043 0.01569607971464832 0.02085902786153329 8.592066903864834e-09 8.065902349909628 -0.13732456649103797 QVEKEET(ph)NEIQVVNEEPQR ddPTM_A549_MK2206_60min_R1 1 QVEKEETNEIQVVNEEPQR 19 1 Q8NBJ4-2;Q8NBJ4 Q8NBJ4-2 GOLM1 Golgi membrane protein 1 1 QVEKEET(1)NEIQVVNEEPQR 102.07 8.8616e-10 4387500.0 1470.9 1980.4 1649.0 1789.6 2195.1 2075.2 1551.5 2062.8 2501.7 2445.8 2126.0 True False 1719.1519599476665 2081.193901027682 1882.8529958271688 2228.0520803381964 1872.203697831386 2294.796286593727 1833.3874670587088 2355.2082170600534 1935.06894439399 1893.292081318129 1598.055525384981 1.075777363576596 1.30232890407629 1.1782150031198562 1.394226949530709 1.1715510932452495 1.4359928363821384 1.1472614298661714 1.4737962352670255 1.210889680399447 1.184747370315574 1.0 10.64210182109185 -10.041766226738474 0.8695790020789286 1.0183752310970573 1.2714292913155694 0.16635775753228177 0.13085218107091573 0.36228837449368173 0.5514734638481802 0.04711010487846354 0.02203174183334414 9.083093259230721e-11 10.041766226738474 0.25305406021851207 QVENKENIEGAQDATENS(ph)ASSLAPGFIR ddPTM_A549_MK2206_60min_R1 2 QVENKENIEGAQDATENSASSLAPGFIR 28 1 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 QVENKENIEGAQDAT(0.177)ENS(0.655)AS(0.138)S(0.03)LAPGFIR;QVENKENIEGAQDAT(0.104)ENS(0.669)AS(0.114)S(0.114)LAPGFIR 68.708 8.7565e-05 3953100.0 1799.35 1543.4099999999999 1848.33 2035.4499999999998 2490.0 1493.86 1573.62 1785.06 2464.8999999999996 2427.3999999999996 2819.2 True False 2103.036290116141 1621.9629765628815 2110.450987129915 2534.1353413748216 2123.7242984830546 1651.9392736559873 1859.5263847327915 2038.0977215169771 1906.604085636465 1879.048654097483 2119.114834038257 0.9924126131987496 0.7653964525707245 0.995911572714617 1.1958461621193446 1.0021751838884605 0.7795421216074431 0.8775014713049859 0.9617684180111699 0.899717209757423 0.8867139354202453 1.0 11.049246053593796 QVENKENIEGAQDATENS(ph)ASSLAPGFIR ddPTM_A549_PD325901_60min_R1 1 QVENKENIEGAQDATENSASSLAPGFIR 28 1 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 QVENKENIEGAQDAT(0.001)ENS(0.986)AS(0.011)S(0.002)LAPGFIR 119.96 4.7926e-21 3567400.0 1248.4 1119.8 1257.8 1051.0 1204.4 1391.3 1478.7 1032.7 1370.4 1598.3 1371.2 True False 1375.1366489764932 1214.1694759384416 1343.1618717658403 1115.917883005816 1119.8070989544365 1379.969714084044 1534.9727376756875 1012.1019883625219 1312.8068536943706 1497.3830652324157 1202.5510927529642 1.14351619425037 1.0096614466158604 1.1169270726709666 0.9279588116719254 0.9311929494745173 1.1475352044501665 1.2764303711717733 0.841629095397142 1.091684886909047 1.2451720964341744 1.0 10.231882475701413 -11.107008698073278 1.3999494925226021 0.9995433082753667 1.05576181150596 0.0 0.13769445772825356 1.6014067948461028 5.534484201686989 0.08540750578383569 0.017897326136592184 7.816121502613185e-12 11.107008698073278 0.056218503230593186 QVEPPAKKPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR ddPTM_A549_PD325901_60min_R1 2 QVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 39 3 P29692;E9PK01;P29692-2;P29692-4;P29692-3;E9PRY8;A0A087X1X7;E9PI39;E9PQ49;E9PL71;E9PQZ1;H0YE72 P29692 EEF1D Elongation factor 1-delta 1 QVEPPAKKPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;QVEPPAKKPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR 238.59 3.5185999999999993e-144 131374000.0 3148.6000000000004 3173.2 5569.1 4945.6 4646.1 8241.6 9160.2 6785.299999999999 6361.0 6841.700000000001 5417.0 True False 3468.2435541231876 3440.616700346369 5947.05261571883 5251.078479727467 4319.773964174867 8174.483142093767 9508.796423653774 6649.961868535126 6093.669290973365 6409.713894388175 4750.743341192246 0.7300422912875772 0.7242270215934066 1.251815176827961 1.1053172319786186 0.9092838012778811 1.7206745460684685 2.001538652110692 1.3997729178243195 1.282677015644482 1.3492023108913296 1.0 12.213937551947328 -5.760806459437947 24.263449406759676 1.239833026803137 0.7271344101875719 0.3356320061053024 0.30686386053602815 11.515010417122724 441272.0649310171 0.04742915053304229 0.16417666808564982 1.7345768286228378e-06 5.760806459437947 -0.5126986166155652 QVETEEAGVVTTATAS(ph)VNLKVSPK ddPTM_A549_PD325901_60min_R1 1 QVETEEAGVVTTATASVNLKVSPK 24 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QVETEEAGVVT(0.031)T(0.031)AT(0.031)AS(0.559)VNLKVS(0.348)PK 50.144 0.0024305 886980.0 1625.6 1378.6 1638.3 2115.0 1896.9 1774.7 1548.5 1890.8 1661.7 1912.0 1626.9 True False 1790.6297152965303 1494.7794601971202 1749.484889898216 2245.63874648649 1763.668287949743 1760.24743159991 1607.4290148717128 1853.086510696094 1591.8645277174087 1791.2759936960376 1426.801613768813 1.2549955775328054 1.0476435166405145 1.2261584743214957 1.5738969768577473 1.2360991681885727 1.2337015984656194 1.1265960168252005 1.2987695646077062 1.1156873614073028 1.2554485335662657 1.0 10.478569037325277 -9.18099364913213 0.6952052455743031 1.0160055942215604 1.2599918477174927 0.027106577948927235 0.14321116602576842 0.4755127278035249 0.5033205244739758 0.042328226530657195 0.032573488577888415 6.591835346873621e-10 9.18099364913213 0.24398625349593228 QVETEEAGVVTTATASVNLKVS(ph)PK ddPTM_A549_MK2206_60min_R1 3 QVETEEAGVVTTATASVNLKVSPK 24 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QVETEEAGVVTT(0.001)ATASVNLKVS(0.999)PK;QVETEEAGVVT(0.031)T(0.163)AT(0.163)AS(0.163)VNLKVS(0.479)PK;QVETEEAGVVTTATASVNLKVS(1)PK 182.72 1.0034e-50 33575300.0 5517.49 6503.280000000001 7050.1900000000005 5948.72 11010.939999999999 9054.36 7964.1 8322.52 11414.99 8607.400000000001 8528.9 True False 6448.707422320793 6834.269174245256 8050.0129549125195 7406.156667048191 9391.245312104013 10012.486365402256 9411.073881019824 9502.262696648564 8829.512990993306 6662.982361901078 6410.9387443348805 1.005891286672999 1.0660325182929657 1.2556683624572191 1.15523747182778 1.4648783410078163 1.5617816305373273 1.4679712685347457 1.4821952097179805 1.377257425645446 1.0393146195303955 1.0 12.64631990868802 -5.686065436080263 1.99493272962998 1.27060830301529 0.9942644593257305 0.23570273802745578 0.18049636126713234 0.6012768821965304 4.206972383026245 0.03172050677145727 0.22199817594210272 2.06031945713426e-06 5.686065436080263 -0.27634384368955944 QVETEEAGVVTTATASVNLKVS(ph)PK ddPTM_A549_PD325901_60min_R1 5 QVETEEAGVVTTATASVNLKVSPK 24 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QVETEEAGVVTTATAS(0.01)VNLKVS(0.989)PK;QVETEEAGVVT(0.002)T(0.002)AT(0.001)AS(0.002)VNLKVS(0.993)PK;QVETEEAGVVT(0.001)T(0.004)AT(0.004)AS(0.059)VNLKVS(0.933)PK;QVETEEAGVVTTATASVNLKVS(1)PK;QVETEEAGVVTTATAS(0.002)VNLKVS(0.998)PK 244.44 1.0595999999999994e-99 93992600.0 34901.920000000006 40332.41 44075.0 39316.66 45172.700000000004 40210.899999999994 39145.299999999996 46650.6 39629.33 46001.32 40582.93 True False 38445.1372249645 43731.36373730522 47066.19454450583 41745.16079358655 41999.92538935494 39883.435762281406 40634.995812630084 45720.11718631226 37963.847074807345 43096.78880456564 35591.48688638929 1.0801778905074766 1.2287029164277128 1.3224003451933513 1.1728973539891785 1.1800553745737532 1.1205891984673846 1.14170548542521 1.2845801394095817 1.0666552705704824 1.2108735142798006 1.0 15.119244584350273 -8.926546563583813 5.8761581634215085 1.0288101109354302 1.1919261575105662 0.11312362443859891 0.08618510280839609 0.11401707371580555 6.65268966591472 0.012044729551244672 0.012696586454953744 1.1842773859787325e-09 8.926546563583813 0.163116046575136 QVFEQDAS(ph)GDER ddPTM_A549_MK2206_60min_R1 1 QVFEQDASGDER 12 0 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 QVFEQDAS(1)GDER 79.337 0.00091176 3034800.0 1832.3 2065.8 2044.4 2163.1 2321.2 1807.6 1795.5 1941.6 2930.6 2808.5 2590.5 True False 2141.547444565985 2170.9403962547876 2334.3266614124077 2693.0595971052485 1979.754554875047 1998.8790322122288 2121.719108671552 2216.8277459006217 2266.82377920655 2174.057899412039 1947.2073558371546 1.0998045165278656 1.1148994429108678 1.1988074379519897 1.3830368856363695 1.0167148090008624 1.0265362988796123 1.0896215558714188 1.1384651661546084 1.164140928500131 1.1165004553289373 1.0 10.927190807810826 -10.886411885172972 0.766353479071502 0.9839459212610412 1.139761822163381 0.0342438980516282 0.09950990101467806 1.1186513546994468 0.9601573394709022 0.11394678874291085 0.0183439453862862 1.2989370808912009e-11 10.886411885172972 0.15581590090233977 QVFGHLEFLS(ph)GEKK ddPTM_A549_MK2206_60min_R1 2 QVFGHLEFLSGEKK 14 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 QVFGHLEFLS(1)GEKK;QVFGHLEFLS(1)GEKK 86.37799999999999 2.4353000000000002e-05 5332700.0 1112.47 1244.67 1074.19 1051.4 1589.71 1541.85 1212.35 984.3599999999999 1298.75 1441.38 1528.29 True False 1300.2277387198176 1308.0183865845902 1226.5262944739752 1308.99304719914 1355.8657648761032 1705.007543602804 1432.618302087415 1123.8960444760692 1004.5851986775771 1115.7712569181137 1148.773414341773 1.131840032583645 1.1386217423338105 1.0676833909642252 1.1394701782415202 1.1802725828687377 1.484198295605355 1.2470851816398276 0.9783444066905411 0.8744850691493298 0.9712718304483317 1.0 10.16587855153919 -8.330774210738147 5.461547995325485 0.9406100753636718 1.1989461452161065 0.5495038510885739 0.10551595365210549 0.1330036470091318 7.580555180151811 0.019396491253770704 0.02357189417450622 4.669020591328586e-09 8.330774210738147 0.25833606985243474 QVFGHLEFLS(ph)GEKK ddPTM_A549_PD325901_60min_R1 2 QVFGHLEFLSGEKK 14 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 QVFGHLEFLS(1)GEKK;QVFGHLEFLS(1)GEKK 103.61 5.5239e-06 10839800.0 2694.8 2319.6000000000004 2855.3999999999996 2268.37 2903.4 2333.1 2407.5 3185.9 3048.3 2884.6 2723.3 True False 2968.374112193092 2515.080832636908 3049.1846149150742 2408.48206305795 2699.4752001862435 2314.10000713684 2499.1187299345506 3122.3547252098006 2920.190551748798 2702.4658637110847 2388.3513644210516 1.2428548648295896 1.0530614842119665 1.2766901304131237 1.0084287006245325 1.130267196192303 0.9689110411515139 1.0463781699642631 1.3073263723768194 1.2226804628709507 1.1315193836088586 1.0 11.221799380234062 -11.032820217900733 1.3728652830181856 1.0011659584551762 1.1442645544451016 0.013243204682392151 0.1139205813694315 0.5787642096305307 1.969521853888086 0.07469916863743012 0.01738406224085506 9.272135765971647e-12 11.032820217900733 0.14309859598992536 QVGETSAPGDTLDGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 QVGETSAPGDTLDGTPR 17 0 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 QVGETSAPGDT(0.001)LDGT(0.999)PR;QVGETSAPGDT(0.036)LDGT(0.964)PR 199.41 3.6777e-48 12228700.0 2442.32 2725.84 2301.39 2126.7799999999997 3221.8 2501.46 2031.6599999999999 2270.27 3375.8999999999996 2834.69 3258.5 True False 2854.523907008898 2864.5736129960064 2627.7617077420773 2647.8411954747835 2747.8774878926524 2766.162836865239 2400.7863237669976 2592.087724910282 2611.264040204531 2194.3315602222933 2449.3245199750513 1.1654331158363507 1.1695361678840275 1.072851590841398 1.0810495603505224 1.1218919606131417 1.129357426631819 0.9801830276828535 1.0582867659107438 1.066115991943415 0.8958925378514745 1.0 11.258168219177143 -2.0000000000489115 0.13741140828871404 0.9882873317371121 1.594860345970884 0.5732698531797646 0.05163063219230002 35.48350916210388 0.31231493424426604 0.09074858932622529 4.244969153874165 0.009999999998873771 2.0000000000489115 0.606573014233772 QVGETSAPGDTLDGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 QVGETSAPGDTLDGTPR 17 0 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 QVGETSAPGDT(0.136)LDGT(0.864)PR;QVGETSAPGDT(0.133)LDGT(0.867)PR 126.63 7.4687e-11 2361990.0 943.6800000000001 883.87 1108.8600000000001 793.3900000000001 995.5799999999999 1147.13 951.48 1310.01 1832.52 2756.9 2315.88 True False 1039.481698899501 958.3568268420343 1184.1139077168627 842.3958983805752 925.653895364545 1137.78815360974 987.6890920698339 1283.8808228670366 1755.5055571599603 2582.828863504503 2031.0414415728794 0.5117973851358274 0.4718548854915848 0.5830082456613298 0.41476056624832175 0.4557533275380634 0.5601993786638907 0.48629686812542217 0.6321293089287107 0.8643376354745679 1.2716770867581648 1.0 10.9880039614905 -8.73504221283565 1.368943485457239 0.9551714268718949 0.4909519579352792 0.827690138989323 0.10748705274573059 0.06347530850935451 0.23340281998454634 0.010844364241242972 0.011699299124560813 1.8405930896177707e-09 8.73504221283565 -0.46421946893661575 down QVGS(ph)GGDGER ddPTM_A549_PD325901_60min_R1 1 QVGSGGDGER 10 0 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3;Q5T8D3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 QVGS(1)GGDGER 92.781 0.00061288 4411400.0 1094.5 951.26 976.17 925.94 1060.6 1218.6 1227.3 1072.1 1002.2 1428.4 1155.5 True False 1205.6128342716856 1031.426018647261 1042.4187663870728 983.1332108376835 986.1071148713678 1208.6761256255425 1274.0055731043287 1050.71612445382 960.0810192443801 1338.2105802277306 1013.3808253180061 1.1896937500207345 1.0178069220163033 1.0286545199431363 0.9701517793462978 0.9730864155258911 1.1927165932375434 1.2571834213505437 1.036842318507554 0.9474039721869612 1.3205406563793927 1.0 9.984960720943906 -8.528670038233972 18.3524713058674 0.9760551915700642 1.0844399533863434 0.0 0.13675470823310154 6.7160028366710955 21279.548030079623 0.01600307871361306 0.018216525646415283 2.960260714984635e-09 8.528670038233972 0.10838476181627921 QVHPDTGISSK ddPTM_A549_MK2206_60min_R1 2 QVHPDTGISSK 11 0 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q96A08;Q16778;P33778;P23527;P06899;Q8N257 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B 0 ; 134.99 5.5391e-08 38483000.0 7026.8 9317.3 8747.5 8729.8 11049.3 8137.900000000001 8101.0 8676.6 13866.099999999999 15011.099999999999 17519.4 False True 8212.752051234118 9791.510772594022 9988.027035171708 10868.601391895607 9423.962606919198 8999.047176499176 9572.846838957528 9906.53462097308 10725.450489611663 11620.082084338275 13168.849469157867 0.623649930122507 0.7435357808232413 0.7584585926480661 0.8253265721770485 0.7156253573245416 0.6833586485725587 0.7269311462157446 0.7522703212740567 0.8144561538751907 0.8823915947671142 1.0 13.684841685838832 -9.912297892699032 0.5185177951228871 1.0102751299925137 0.7224131691458151 0.6507285615068695 0.057786749374849386 0.29779414499218404 0.15970891722531078 0.03804166989517034 0.013710897420986252 1.2237764945144302e-10 9.912297892699032 -0.2878619608466986 QVLEPSFR ddPTM_A549_MK2206_60min_R1 2 QVLEPSFR 8 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 103.83 0.0058419 3999600.0 2293.83 2455.5 1950.65 2039.5300000000002 2671.6000000000004 2000.8899999999999 2023.3200000000002 2070.99 3142.3 2842.0 2967.8 False True 2680.9724252408423 2580.4744617115066 2227.281501704223 2539.214941557982 2278.6111790471214 2212.6228517167124 2390.931053721705 2364.5591746408777 2430.574067221983 2199.9902261452776 2230.813352886898 1.201791455018589 1.1567415348182812 0.9984167876805541 1.138246253668861 1.0214261879409894 0.9918457986874405 1.0717754807355795 1.0599538377251057 1.089546135303778 0.9861830095728393 1.0 11.123354096258948 -5.627340131223861 5.1353009078356004 1.045803914937999 1.1912259572896169 0.5835870794531154 0.04574891004359902 0.10182087698681595 4.106415679076666 0.006279956383366321 0.02594495580377645 2.358630275012484e-06 5.627340131223861 0.14542204235161793 QVLEPSFR ddPTM_A549_PD325901_60min_R1 2 QVLEPSFR 8 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 87.30799999999999 0.0075169 10823400.0 2942.2 2785.2 3257.4 2834.4 3738.6000000000004 2751.0 3025.8 3138.2 3415.0 3503.5 3403.7 False True 3240.889978066839 3019.91857866025 3478.4667523374524 3009.4744506105494 3476.0136334698236 2728.5967680911417 3140.9484747812935 3075.6061391297258 3271.479425982399 3282.2884120889507 2985.066477832017 1.0857011065363678 1.0116754856506731 1.1652895431875876 1.008176693202578 1.1644677461234867 0.9140824126881277 1.0522206115364272 1.0303308693357696 1.095948599562981 1.099569619793794 1.0 11.543547345522565 QVLKDDS(ph)LSR ddPTM_A549_MK2206_60min_R1 3 QVLKDDSLSR 10 1 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 QVLKDDS(0.962)LS(0.038)R;QVLKDDS(0.99)LS(0.01)R;QVLKDDS(0.978)LS(0.022)R 58.831 0.0029024000000000003 11681300.0 4312.86 3972.3 3747.2 3689.1 5505.8 4361.219999999999 4149.2 4023.2000000000003 6398.5 6200.9 6385.3 True False 5040.765328696647 4174.473102934888 4278.609306224112 4592.929665609994 4695.904113489156 4822.721405656461 4903.055931885265 4593.500920533263 4949.249966304895 4800.112383287911 4799.65378468519 1.0502351950427757 0.8697446295511693 0.8914412368401164 0.9569293685859563 0.9783839260391906 1.0048061010243854 1.0215436679058003 0.9570483886130031 1.0311681192708189 1.0000955482672906 1.0 12.228714627760041 -6.866803254881709 2.050395999177086 1.010153203413512 0.9307163162043245 0.2606015013277634 0.04617912832549011 0.2504302088115616 2.136647209224571 0.006528674172274122 0.014233747665449615 1.3589289323766463e-07 6.866803254881709 -0.0794368872091874 QVLKDDS(ph)LSR ddPTM_A549_PD325901_60min_R1 1 QVLKDDSLSR 10 1 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 QVLKDDS(0.996)LS(0.004)R 75.669 0.00042599 14656000.0 4221.8 4747.9 5075.8 3974.3 5263.9 4326.0 4273.6 4753.4 4883.2 4849.9 5049.7 True False 4650.394028075106 5148.022195756501 5420.274311264947 4219.783484709819 4894.181823469162 4290.770490280728 4436.23418660365 4658.589708029838 4677.976085785433 4543.676486310889 4428.618912685707 1.0500777149178782 1.1624441608669636 1.223919785858896 0.9528441186534063 1.105125981702751 0.9688732706239152 1.0017195595439765 1.0519283324842839 1.0563058547181483 1.0259804638632604 1.0 12.112641141801117 -6.262829212772985 24.999997045763276 1.0246897559838926 1.1471769133511573 0.5061451832200352 0.05492017510183242 73.62065636138911 1324280.2548455333 0.007306469131183486 0.017859512123417035 5.459725237342918e-07 6.262829212772985 0.12248715736726479 QVLQSTQS(ph)PR ddPTM_A549_MK2206_60min_R1 4 QVLQSTQSPR 10 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 QVLQSTQS(1)PR;QVLQSTQS(1)PR;QVLQST(0.002)QS(0.998)PR;QVLQSTQS(1)PR 172.76 1.4782e-10 112356000.0 17231.0 20483.5 15995.6 16992.199999999997 20017.1 15973.5 13273.0 13360.9 21237.0 22641.699999999997 32267.0 True False 20139.171542496606 21526.022657897658 18264.016604034605 21155.289762808836 17072.611106492022 17663.80516764885 15684.532291505155 15254.848491040186 16426.85340852029 17526.92424465642 24254.21337610403 0.8303370317644815 0.8875168336362429 0.7530244877794657 0.8722315349815325 0.7039028989211608 0.7282778003862931 0.6466724790571036 0.6289566375329126 0.6772783414490989 0.7226342068023721 1.0 14.565947769686316 -10.815243345496276 1.0917532297197152 0.9982530490787643 0.7436460458456784 0.0 0.11430332802978256 0.32083392428892293 0.686159316836533 0.061082624712974404 0.015590355511442118 1.5302297973791034e-11 10.815243345496276 -0.25460700323308594 QVLQSTQS(ph)PR ddPTM_A549_PD325901_60min_R1 2 QVLQSTQSPR 10 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 QVLQSTQS(1)PR;QVLQST(0.005)QS(0.994)PR 188.91 2.6825e-14 92663000.0 13322.2 13927.9 13796.9 12174.7 15253.7 13290.7 15004.699999999999 18863.2 20504.4 26816.0 24847.9 True False 14674.659936714712 15101.653012969304 14733.240601499534 12926.703568250165 14182.33273440825 13182.464945717547 15575.712069386896 18486.958678105875 19642.671373971727 25122.833183552815 21791.765823815895 0.6734038927986733 0.6929981321873849 0.6760920946295135 0.5931921108533006 0.6508115427208102 0.604928717218071 0.714752177281771 0.84834606004722 0.9013804357471823 1.152858992092162 1.0 14.411495484770755 -8.46881197134184 1.2288067868315358 0.9634768771139343 0.6465065647842226 0.8488368847615902 0.06658125034816477 0.07925582067248409 0.23204417063584382 0.008181067924145328 0.009819077642123976 3.3977234586198184e-09 8.46881197134184 -0.3169703123297116 QVLTAPGS(ph)AGQPRSEDEDSLEEAGSPAPGPCPR ddPTM_A549_MK2206_60min_R1 1 QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR 33 1 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 1 QVLT(0.02)APGS(0.512)AGQPRS(0.464)EDEDS(0.004)LEEAGS(0.001)PAPGPCPR 48.716 0.0023531999999999997 4420800.0 204.4 485.39 530.26 250.75 559.59 431.89 504.06 308.23 853.3 763.24 596.63 True False 238.8977228997913 510.0942777316837 605.4588414598627 312.18376125659506 477.2750522843907 477.59231313462044 595.6411773416775 351.92254641478615 660.0289124400973 590.8235539067985 448.47030484968997 0.5326946295359748 1.1374092603581585 1.3500533589683028 0.6961079872640109 1.064228884550907 1.0649363134415133 1.3281619115034016 0.7847176114207541 1.4717338144859193 1.3174195649471592 1.0 8.808868651029842 -7.400330108932809 2.4886107591713684 1.1958747676027897 0.9705683026898878 0.13691969831865858 0.26381272499945596 0.49811864422340324 6.023787156902122 0.043047088434320216 0.07263517143362691 3.978046827131148e-08 7.400330108932809 -0.22530646491290185 QVLTAPGSAGQPRS(ph)EDEDS(ph)LEEAGSPAPGPCPR ddPTM_A549_PD325901_60min_R1 2 QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR 33 1 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 2 QVLTAPGS(0.013)AGQPRS(0.987)EDEDS(0.999)LEEAGS(0.001)PAPGPCPR;QVLTAPGS(0.002)AGQPRS(0.998)EDEDS(1)LEEAGSPAPGPCPR 194.63 1.7714e-88 62548000.0 4300.1 3884.1000000000004 4639.4 4333.1 4920.8 4510.1 3928.1 4572.2 4013.2 4949.0 4421.5 True False 4736.642986433694 4211.426738250136 4954.257582978563 4600.7457458158915 4575.1799838384195 4473.371240918891 4077.585995038799 4481.00388417849 3844.539160278932 4636.519295398376 3877.683530197805 1.2215135530134593 1.086067675573129 1.27763329431008 1.186467567553457 1.179874517404218 1.1536194756694598 1.0515520318469096 1.1555878269286997 0.9914525335394809 1.1956930624407769 1.0 11.920979350085974 -8.222033968424466 0.835584830366935 0.9926957483229731 1.1917367488752812 0.12457784690170115 0.08230319315568968 0.21194069947125965 0.2948889728942104 0.01113481568715458 0.015312524604139122 5.9974416531843286e-09 8.222033968424466 0.1990410005523081 QVLTAPGSAGQPRS(ph)EDEDSLEEAGSPAPGPCPR ddPTM_A549_MK2206_60min_R1 2 QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR 33 1 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 1 QVLT(0.003)APGS(0.236)AGQPRS(0.761)EDEDSLEEAGSPAPGPCPR;QVLTAPGS(0.007)AGQPRS(0.993)EDEDSLEEAGSPAPGPCPR 135.16 2.6692e-30 26540000.0 1285.78 1732.3400000000001 1264.65 1327.1100000000001 1874.22 1407.95 1556.73 1427.7800000000002 2200.0 1875.21 1999.9 True False 1502.7882296971318 1820.5087065776072 1443.996386399531 1652.252009576232 1598.5247207642221 1556.93833447843 1839.5676903604929 1630.1721873928675 1701.7035126780904 1451.5987586100937 1503.2696355679304 0.999679760796461 1.2110327139614079 0.960570447399474 1.0991055566368948 1.0633652692388114 1.035701312419727 1.223711067419725 1.0844176911595729 1.132001520163209 0.9656276720188554 1.0 10.553888087667358 -4.968444090461237 18.132085981022044 1.0770806869187142 0.7106703604858089 0.06692053083054272 0.08357742547618995 20022772.389786325 288382901.6911218 0.010615702176013245 235546833.63006648 1.075365030180552e-05 4.968444090461237 -0.3664103264329053 QVLTAPGSAGQPRS(ph)EDEDSLEEAGSPAPGPCPR ddPTM_A549_PD325901_60min_R1 2 QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR 33 1 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 1 QVLTAPGSAGQPRS(0.999)EDEDS(0.001)LEEAGSPAPGPCPR;QVLTAPGSAGQPRS(1)EDEDSLEEAGSPAPGPCPR 400.13 0.0 91610000.0 5389.0 6059.4 6643.1 5501.700000000001 6238.7 5793.9 5979.9 6976.4 5730.200000000001 6387.4 6808.0 True False 5936.087312827879 6570.046903466146 7093.940714205484 5841.527513732733 5800.515234346594 5746.716399361425 6207.468366826839 6837.2502291200735 5489.379621307276 5984.098473919496 5970.659159467749 0.9942097102319014 1.100388872985312 1.1881335920769374 0.9783722965444693 0.9715033264206088 0.9624927911433002 1.0396621547193123 1.1451416077365864 0.9193925619757908 1.0022508929236793 1.0 12.543674498162238 -6.3011992580562195 23.722379776036654 0.98141752417027 1.0948585576326078 0.21596911181816292 0.0701629069427529 246.2990182781126 146951.75880350146 0.010452010358493533 0.02428876970059852 4.998051674390045e-07 6.3011992580562195 0.1134410334623378 QVNPS(ph)KR ddPTM_A549_MK2206_60min_R1 2 QVNPSKR 7 1 P78318 P78318 IGBP1 Immunoglobulin-binding protein 1 1 QVNPS(1)KR;QVNPS(1)KR 45.137 0.030839 23645000.0 4415.3 4291.8 3402.2 2336.9 3658.6 3609.7 3036.1 3160.0 3288.6 5933.700000000001 6289.5 True False 5160.494696279103 4510.234288240054 3884.683118497994 2909.4406049074287 3120.4247865181133 3991.6760580750615 3587.7200700850426 3607.939677094131 2543.7373508150777 4593.273048866373 4727.643568630681 1.0915574791891074 0.9540131828395012 0.8216954307372113 0.6154103122774379 0.6600380805403897 0.8443267772048251 0.75888125193926 0.7631581409888601 0.5380560767511177 0.971577696623346 1.0 12.20690555512829 -5.629770754123285 2.381191769730133 0.7605789838472853 1.0813099644991393 0.36524377771279937 0.1319186528175655 0.3266654117439844 3.352636707082739 0.023632390444158206 0.15563315893213112 2.345466562226901e-06 5.629770754123285 0.320730980651854 QVNPS(ph)KR ddPTM_A549_PD325901_60min_R1 1 QVNPSKR 7 1 P78318 P78318 IGBP1 Immunoglobulin-binding protein 1 1 QVNPS(1)KR 47.198 0.025121 16727000.0 4059.4 4079.6 3773.4 2550.0 3557.2 2522.9 3004.1 3478.1 2540.4 3649.2 4526.2 True False 4471.5072996276685 4423.402209357446 4029.4856152975203 2707.507708529812 3307.3545436737986 2502.3543388648295 3118.422669406595 3408.726566983332 2433.635822478969 3418.7888892236297 3969.5060939457876 1.1264643998021626 1.114345740923268 1.0151100716140007 0.6820767230107668 0.8331904436972929 0.6303943814776783 0.7855946295592673 0.8587281355184854 0.613082777776989 0.861263040869971 1.0 11.954743795772602 -6.073891118518577 4.384624138040471 0.7951822344658125 1.1113847399911805 0.6187706340411103 0.10704471240159642 0.14903297174918217 5.369659463700813 0.020469864060360488 0.05867451503107035 8.435462157796029e-07 6.073891118518577 0.316202505525368 QVPGGGGGGGS(ph)GGGGGSGGGGSGGGR ddPTM_A549_MK2206_60min_R1 1 QVPGGGGGGGSGGGGGSGGGGSGGGR 26 0 K7EN53;K7EQC2;Q9UHB9-4;Q9UHB9-2;Q9UHB9 K7EN53 SRP68 Signal recognition particle subunit SRP68 1 QVPGGGGGGGS(0.799)GGGGGS(0.159)GGGGS(0.042)GGGR 47.808 0.011076 2939200.0 411.62 241.09 255.82 269.57 374.54 506.96 311.12 170.44 608.63 726.75 446.66 True False 481.0913928572022 253.360451221351 292.0991227365104 335.61466210145716 319.44566215013805 560.6061707071872 367.6464767974896 194.60039195060875 470.77627678239406 562.576670250204 335.7419948111266 1.4329199215243917 0.7546284204449321 0.870010684546127 0.9996207423806455 0.9514617387373417 1.6697529036323238 1.0950267838978887 0.5796129020442683 1.4021965796898053 1.675621992317894 1.0 8.391209191262226 QVPGGGGGGGS(ph)GGGGGSGGGGSGGGR ddPTM_A549_PD325901_60min_R1 1 QVPGGGGGGGSGGGGGSGGGGSGGGR 26 0 K7EN53;K7EQC2;Q9UHB9-4;Q9UHB9-2;Q9UHB9 K7EN53 SRP68 Signal recognition particle subunit SRP68 1 QVPGGGGGGGS(0.941)GGGGGS(0.058)GGGGSGGGR 71.002 0.00010673 4250100.0 771.94 383.21 518.39 757.36 787.99 558.02 545.19 562.06 760.06 565.0 791.68 True False 850.3067805278075 415.504451575612 553.5710627323058 804.1404071106423 732.6443008179233 553.4756701309411 565.9375037894152 550.8492723724601 728.1173213798481 529.3258035764966 694.3083788730063 1.2246817212662997 0.5984436659831964 0.7972985485654893 1.1581891153552175 1.055214546030891 0.7971611562996499 0.8151097135080506 0.7933784023557263 1.0486944181225641 0.7623785333480958 1.0 9.43943277167792 -8.787311003312384 24.964877155720725 1.022994604134396 0.8979948821987765 0.0 0.1897620618257881 383.49829031643526 370055.60988138284 0.029354024650296108 0.031254894214950764 1.631882919093291e-09 8.787311003312384 -0.12499972193561948 QVPGGRET(ph)PQGELRPEVVEDEVPR ddPTM_A549_MK2206_60min_R1 1 QVPGGRETPQGELRPEVVEDEVPR 24 2 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 QVPGGRET(1)PQGELRPEVVEDEVPR 78.921 7.5272000000000005e-06 4003800.0 442.62 502.31 485.0 535.27 576.7 801.11 609.43 636.04 908.33 931.46 775.06 True False 517.3234349799691 527.8754334605201 553.7802928903436 666.4111740291836 491.8681939498706 885.88292846622 720.1555424103057 726.2006177908067 702.59470530495 721.0425390729343 582.591211432212 0.8879698574721167 0.9060820402058906 0.9505469393006442 1.1438744027581758 0.8442767146120987 1.5205909582611303 1.2361249676937498 1.2465011547385907 1.2059823277761565 1.2376474703426452 1.0 9.186340127918282 -6.281658108742306 1.2942904026598046 1.1416897653741311 0.8853866623435498 0.34053476999321286 0.16031749090302183 0.5442367510364267 1.647267307229733 0.02551055300372971 0.11064232196785027 5.228075988074354e-07 6.281658108742306 -0.25630310303058135 QVPGGRET(ph)PQGELRPEVVEDEVPR ddPTM_A549_PD325901_60min_R1 1 QVPGGRETPQGELRPEVVEDEVPR 24 2 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 QVPGGRET(1)PQGELRPEVVEDEVPR 77.791 8.5897e-06 7661400.0 1943.9 2158.5 2225.2 2173.8 1884.0 1913.2 1795.8 1921.4 1691.2 1866.8 2718.6 True False 2141.2432969764554 2340.404370256409 2376.215453214619 2308.0706889420007 1751.67433944716 1897.6195335194377 1864.140151699465 1883.0761696908605 1620.1247453064216 1748.929929409918 2384.229434625295 0.8980860926721058 0.9816187721985012 0.9966387541004688 0.9680572915604225 0.7346920199911267 0.7959047505919525 0.7818627371289175 0.7898049333439272 0.6795171311023764 0.7335409520622663 1.0 11.219307357823457 -6.735676465798463 24.70423764483421 0.8251091200011379 0.9651044093930349 0.46033308556887076 0.08425107731941762 232.50490147872608 222949.142651913 0.017246100754971974 0.03589054759793083 1.8379070099306111e-07 6.735676465798463 0.13999528939189698 QVQHEES(ph)TEGEADHSGYAGELGFR ddPTM_A549_MK2206_60min_R1 1 QVQHEESTEGEADHSGYAGELGFR 24 0 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 QVQHEES(0.966)T(0.034)EGEADHSGYAGELGFR 146.45 9.806000000000001e-28 8886700.0 736.3 584.01 706.04 860.62 1048.6 867.31 660.83 762.88 1245.6 1322.8 1178.4 True False 860.5694391933281 613.7336144916059 806.1670886439133 1071.4719386347 894.3523290720201 959.0881685262167 780.8942570779291 871.0205762220158 963.4735888144678 1023.9785612755005 885.7707578145156 0.9715487123515261 0.6928808713508292 0.910130619611997 1.209649256516855 1.0096882530629911 1.0827724442976634 0.8815985966895645 0.9833476309052093 1.08772340960055 1.156031120063151 1.0 9.790789559709232 -6.006872127258551 24.968851814251437 1.0371961530131908 0.8245375020352262 0.41779264451213516 0.10299527344624677 196.70667839604627 714714.8920348061 0.012463631995866115 0.036773616235802706 9.843008785514073e-07 6.006872127258551 -0.21265865097796455 QVQHEEST(ph)EGEADHSGYAGELGFR ddPTM_A549_MK2206_60min_R1 1 QVQHEESTEGEADHSGYAGELGFR 24 0 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 QVQHEES(0.443)T(0.557)EGEADHSGYAGELGFR 72.60300000000001 5.4166e-05 4407700.0 1117.8 1464.4 967.64 1011.1 1824.5 1136.1 707.81 1104.0 1690.2 1778.0 1900.3 True False 1306.457312413829 1538.9317050418792 1104.8659022936322 1258.8195453900041 1556.1184669005363 1256.3213479178553 836.4099149589588 1260.4953808582018 1307.3723986947768 1376.34856512537 1428.4030643880894 0.9146279120967158 1.0773791679739493 0.7734972920734691 0.8812775446748758 1.0894113193233441 0.8795286003226604 0.5855559511259286 0.8824507677727383 0.9152685479954773 0.9635575555944226 1.0 10.48018741875104 -9.90253312922766 1.095983045506206 0.9866758417847974 0.8883740461232253 0.07097646470574348 0.1291278053897213 0.8484920066212426 2.0672651305982104 0.04247869351398503 0.025162927945948186 1.2516037934658927e-10 9.90253312922766 -0.09830179566157204 QVQS(ph)LTCEVDALK ddPTM_A549_MK2206_60min_R1 1 QVQSLTCEVDALK 13 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 QVQS(0.948)LT(0.052)CEVDALK 178.14 3.0486000000000004e-22 6962000.0 2231.5 2989.3 2522.9 2271.5 3513.5 3080.2 2956.7 3278.6 3523.0 3675.9 3363.3 True False 2608.1226450630347 3141.4426016673638 2880.685156562985 2828.01760197151 2996.6688043053055 3406.144719528717 3493.894117855292 3743.351590291399 2725.0461250749604 2845.511636976575 2528.0997876421948 1.0316533618696564 1.2426102074859935 1.1394665553330967 1.1186336930984162 1.1853443518936873 1.3473141907525024 1.3820238168343169 1.4806977195241948 1.077902912849989 1.125553528735672 1.0 11.30383769449644 -8.975611259903545 23.669799171584604 1.0343686013791158 1.2424133404809858 0.27287175654225737 0.12445032928633408 75.52647355924296 73301.26976271189 0.022780003761664017 0.023588291301683675 1.0577638976199397e-09 8.975611259903545 0.20804473910187005 QVQS(ph)LTCEVDALK ddPTM_A549_PD325901_60min_R1 2 QVQSLTCEVDALK 13 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 QVQS(0.926)LT(0.074)CEVDALK;QVQS(0.934)LT(0.066)CEVDALK 198.16 2.0386e-30 15831800.0 6358.9 7809.599999999999 8366.6 5707.5 6935.4 5729.5 7405.299999999999 7319.9 6441.200000000001 6691.200000000001 6935.9 True False 7004.4508468252325 8467.742399793586 8934.40778845292 6060.039312327018 6448.281429831114 5682.840851609673 7687.112743835647 7173.89885214954 6170.498763876376 6268.716490072666 6082.828270292651 1.1515121807784066 1.3920732303340522 1.4687917184982564 0.9962535588786996 1.0600794800213686 0.9342431841062424 1.263739892407946 1.1793689601900263 1.01441278459428 1.030559504809277 1.0 12.570526559446654 -6.271493884344083 24.980302418648282 1.0356770826553907 1.3429204636261827 0.5354958567708026 0.11351670505180075 340.2308811329661 845299.7608731971 0.016154163005067276 0.03793988373475153 5.351876901339516e-07 6.271493884344083 0.30724338097079196 QVQS(ph)LTCEVDALKGTNESLER ddPTM_A549_MK2206_60min_R1 2 QVQSLTCEVDALKGTNESLER 21 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 QVQS(0.996)LT(0.004)CEVDALKGTNESLER;QVQS(0.652)LT(0.348)CEVDALKGTNESLER 125.52 5.699e-16 9339900.0 2763.3 3669.8 3334.2 3507.5 4369.6 2820.7 2747.1000000000004 2934.2 5313.5 4600.6 4601.200000000001 True False 3229.677483801339 3856.5771450168586 3807.0396959896557 4366.8376574576605 3726.837628374119 3119.1846017708754 3246.212510961637 3350.1318356106335 4110.000733915923 3561.321264744536 3458.59505334025 0.933811976826305 1.1150704507289007 1.100747453019365 1.262604494053227 1.0775582486231816 0.9018646455179602 0.9385928276935751 0.968639515162417 1.18834401556972 1.0297017169746643 1.0 11.755970391539265 -5.250219479506968 23.371281401491185 1.0739911303591043 0.933811768331014 0.09004114973576594 0.10338065292258494 1191.9431534308605 2482720.8483714433 0.015835868946548728 0.3104753507685917 5.62057206417968e-06 5.250219479506968 -0.14017936202809034 QVQS(ph)LTCEVDALKGTNESLER ddPTM_A549_PD325901_60min_R1 2 QVQSLTCEVDALKGTNESLER 21 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 QVQS(0.995)LT(0.005)CEVDALKGTNESLER;QVQS(0.9)LT(0.1)CEVDALKGTNESLER 107.76 1.6750000000000002e-10 19929200.0 3449.6000000000004 3058.5 3461.5 3175.0 3252.6000000000004 3488.8999999999996 3784.4 3801.1 3057.0 3380.1000000000004 4406.9 True False 3799.8008525387017 3316.2505288066823 3696.418205690458 3371.112539051825 3024.148596860844 3460.4875551411083 3928.417412903138 3725.284078594735 2928.524921003862 3166.679909148526 3864.879237640778 0.9831615993409922 0.8580476451913689 0.9564123426394163 0.8722426579904317 0.7824691047027028 0.8953675761557506 1.0164398863083612 0.9638811071542678 0.7577274064561741 0.8193476987088345 1.0 11.916207620939339 -11.245886464580826 1.7398119683434379 1.000128982378115 0.8765276472684806 0.0 0.09501480574676106 0.4812846395495945 2.627164130324076 0.0664241189422327 0.013539135778109678 5.676929951319679e-12 11.245886464580826 -0.12360133510963434 QVQSLT(ph)CEVDALK ddPTM_A549_MK2206_60min_R1 1 QVQSLTCEVDALK 13 0 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 QVQS(0.47)LT(0.53)CEVDALK 165.86 3.4336999999999995e-19 5239000.0 2618.5 2828.5 2353.2 2235.2 3647.3 3023.7 1885.2 2610.6 3476.8 3478.2 3202.8 True False 3060.4387838214466 2972.458568499696 2686.919144803208 2782.82410034194 3110.7870015490957 3343.665927030381 2227.716437575944 2980.6605446271947 2689.3103513087217 2692.4722042851863 2407.4563672168447 1.2712333338607862 1.2346884491767656 1.1160821776011824 1.155918810507474 1.2921467835968885 1.3888791392285325 0.9253403168221528 1.2380953545891287 1.1170754277959007 1.1183887861684638 1.0 11.233293935536505 -9.403099473558711 0.3894313565445218 0.9864758221972358 1.228854542967815 0.1913432238413839 0.11478105869128674 0.9767913409340537 0.3581930992437168 0.09121340919898153 0.0476717061632379 3.9527607316355243e-10 9.403099473558711 0.2423787207705792 QVQSLTCEVDALKGTNES(ph)LER ddPTM_A549_PD325901_60min_R1 1 QVQSLTCEVDALKGTNESLER 21 1 P08670;B0YJC4;B0YJC5 P08670 VIM Vimentin 1 QVQSLTCEVDALKGT(0.351)NES(0.649)LER 132.69 3.9608999999999995e-18 8610900.0 2037.0 2257.8 2394.6 2007.6 2546.3 2399.3 2018.2 2532.5 1950.7 1945.2 2525.9 True False 2243.794740439858 2448.072729749788 2557.1119558995715 2131.6048924095876 2367.4566722581208 2379.7608962853806 2095.0037054014165 2481.987300792184 1868.7188627419796 1822.3797400300907 2215.2303129993506 1.0128945632753787 1.1051098007209805 1.1543323242256125 0.9622497850002165 1.0687180734054964 1.0742724502822738 0.9457272650647547 1.1204195275892794 0.8435776866071295 0.8226592645180297 1.0 11.113240985315349 -8.756858588601238 24.99999986429613 0.9261339075268611 1.0547193674300959 0.47449532974858466 0.07538671433214754 91.61667372879572 500003.865519995 0.013313065200734372 0.01484899100602094 1.7504165520896052e-09 8.756858588601238 0.12858545990323478 QVS(ph)DDLTER ddPTM_A549_MK2206_60min_R1 1 QVSDDLTER 9 0 P35232;C9JZ20;E7ESE2;E9PCW0;C9JW96 P35232 PHB Prohibitin 1 QVS(0.996)DDLT(0.004)ER 47.288000000000004 0.034730000000000004 1403800.0 484.2 319.8 313.3 396.15 426.77 451.41 327.03 338.95 593.76 374.2 361.9 True False 565.9211224465702 336.07645402375886 357.73065105679314 493.2067677838491 363.99269833880066 499.1779065782931 386.447117855114 386.9972004908403 459.2743080398833 289.6679601068132 272.03024206812046 2.080361058918056 1.235437837604836 1.3150400056153022 1.8130585924352585 1.33805967884869 1.8350088680702328 1.420603514216415 1.422625652018243 1.688320771059249 1.0648373427329305 1.0 8.087623237045921 -10.845185743939778 0.9105697216466444 0.9728062359148985 1.563123522029254 0.40946567642124165 0.24924037070411204 0.48469535664703567 0.6573704968939985 0.20169888588731347 0.041020448340830955 1.4282829637688121e-11 10.845185743939778 0.5903172861143556 QVS(ph)FPDDDEEIVR ddPTM_A549_MK2206_60min_R1 3 QVSFPDDDEEIVR 13 0 H7C2T4;C9JG63;Q7Z698-2;Q7Z698 H7C2T4 SPRED2 Sprouty-related, EVH1 domain-containing protein 2 1 QVS(1)FPDDDEEIVR;QVS(1)FPDDDEEIVR;QVS(1)FPDDDEEIVR 164.65 5.7284e-19 18707900.0 1717.62 2600.43 2107.5299999999997 1903.62 2776.96 2116.48 1905.3799999999999 1721.49 3310.38 3097.9100000000003 2813.05 True False 2007.5122642227973 2732.7807796654265 2406.4094446911035 2370.006985456748 2368.472862616667 2340.44450879428 2251.562882361794 1965.5164793420176 2560.5842155905907 2398.0899794080647 2114.4920487696227 0.9494063907173004 1.2924053231865178 1.1380555656812903 1.120839866404702 1.1201143385688446 1.1068589783329448 1.064824473410496 0.9295454577309521 1.2109689497676472 1.1341210674230067 1.0 11.046095420000567 -7.1740456412809595 1.9592511340185264 1.0847809619464461 1.1378299589436212 0.05010396776338655 0.09995790175985697 0.971635854037624 7.282082525576696 0.016890943721054513 0.032323195881874565 6.698142129771914e-08 7.1740456412809595 0.053048996997175024 QVS(ph)FPDDDEEIVR ddPTM_A549_PD325901_60min_R1 2 QVSFPDDDEEIVR 13 0 H7C2T4;C9JG63;Q7Z698-2;Q7Z698 H7C2T4 SPRED2 Sprouty-related, EVH1 domain-containing protein 2 1 QVS(1)FPDDDEEIVR;QVS(1)FPDDDEEIVR 141.0 2.7662e-12 5403900.0 959.63 1166.6399999999999 1140.12 1005.3799999999999 1201.22 1128.67 1274.32 1572.67 1921.8899999999999 2042.77 2183.67 True False 1057.0509311577314 1264.9568471234352 1217.4953992985124 1067.4800392163536 1116.8504511840326 1119.478485729346 1322.814944934661 1541.3018631142515 1841.1196468525052 1913.7891535786907 1915.0924334246386 0.5519581784715603 0.6605199963436715 0.6357371467033278 0.5574039250457726 0.5831835746887891 0.5845558502507648 0.6907316439912797 0.8048185227059975 0.9613737774318013 0.9993194689597216 1.0 10.903198311290172 -8.429718033084901 1.476481172209771 0.9870539161990777 0.5972594080474299 0.9631893304586384 0.032928682669832135 0.045899871440296384 0.19404969057241922 0.006214790844561484 0.0075644711123656165 3.7177652771412e-09 8.429718033084901 -0.38979450815164773 QVS(ph)PAASLR ddPTM_A549_MK2206_60min_R1 2 QVSPAASLR 9 0 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 QVS(1)PAASLR;QVS(0.999)PAAS(0.001)LR 121.58 0.00012466 22580000.0 2741.3 3206.7 3225.3 2620.2 3979.7 3246.3999999999996 3009.8 3387.4 4810.0 4504.6 4154.4 True False 3203.964421649696 3369.9073330768856 3682.6960384726285 3262.1491176252457 3394.2914018767115 3589.9318932140845 3556.6417005177577 3867.5743234774245 3720.542679991642 3487.007731419428 3122.7478243929263 1.0260080550284454 1.0791480845021508 1.1793126584560372 1.0446405861348793 1.0869566140956561 1.1496067230186864 1.1389461783418846 1.2385163775526111 1.191432318334872 1.1166472374685956 1.0 11.608600354761178 -5.518853559192174 24.443799954547778 1.1109168753975258 1.0392930189582412 0.14420823493899448 0.06550740415643333 220.5677388430406 1339412.0279157388 0.01170052051627704 0.04765549831238308 3.0279342524660507e-06 5.518853559192174 -0.0716238564392846 QVS(ph)PAASLR ddPTM_A549_PD325901_60min_R1 2 QVSPAASLR 9 0 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 QVS(0.973)PAAS(0.027)LR;QVS(0.995)PAAS(0.005)LR 107.09 0.00049993 28912000.0 5193.3 5523.1 5415.4 4915.799999999999 6723.9 5085.7 6021.1 6038.7 5853.2 5863.4 6227.1 True False 5720.519992894603 5988.551020321135 5782.921609445642 5219.437801408176 6251.636460195727 5044.283745358459 6250.236255372342 5918.253391231493 5607.2103590512925 5493.183923345894 5461.206176839251 1.0474828833884886 1.0965619730158387 1.0589092266779403 0.9557298575438508 1.1447354774314615 0.9236574452638424 1.1444790863013623 1.083689792985762 1.0267347866907568 1.0058554365960872 1.0 12.415003908547812 -9.051766179949567 3.1593397518149313 1.010455688707416 1.0562614290877035 0.09277361411003093 0.06471405725904228 0.40357852955771345 8.358438564567194 0.011170906977361814 0.011108223365163539 8.876337770629192e-10 9.051766179949567 0.045805740380287396 QVS(ph)SPNAQKPFAHYQR ddPTM_A549_MK2206_60min_R1 1 QVSSPNAQKPFAHYQR 16 1 Q15697 Q15697 ZNF174 Zinc finger protein 174 1 QVS(0.5)S(0.5)PNAQKPFAHYQR 51.798 0.007851 6662100.0 1115.7 1085.5 1275.8 1194.9 1881.2 1225.6 1258.5 1105.1 1569.3 1627.8 2084.1 True False 1304.0028837538994 1140.7473134546292 1456.7276240608257 1487.6505536410991 1604.477972010572 1355.2921785125636 1487.1531597121402 1261.751309226811 1213.8560556571492 1260.0788494438018 1566.5604517661518 0.8323987001483134 0.7281859516934327 0.9298891864776111 0.9496285649008379 1.0242043134701069 0.86513876753661 0.9493110578883265 0.8054277814841446 0.7748542702508793 0.8043601815832767 1.0 10.613384727387642 -11.10068869530302 1.4641589132431996 0.9994134855102647 0.8638639907317398 0.0 0.10053654489747735 0.4983276468776136 1.9232185709871883 0.06476787010601903 0.014389943519376908 7.930696034825134e-12 11.10068869530302 -0.13554949477852485 QVS(ph)SPNAQKPFAHYQR ddPTM_A549_PD325901_60min_R1 1 QVSSPNAQKPFAHYQR 16 1 Q15697 Q15697 ZNF174 Zinc finger protein 174 1 QVS(0.576)S(0.424)PNAQKPFAHYQR 63.708999999999996 0.0013861 7309400.0 1837.1 1895.0 1859.9 1832.1 2451.6 1810.2 2176.8 1677.4 1794.6 2434.3 2250.5 True False 2023.6010395984597 2054.6983005030784 1986.1239984872686 1945.2646559990067 2279.4080735608563 1795.4583313698984 2259.639315190667 1643.9429411051572 1719.179202889608 2280.5978825597645 1973.7027670949121 1.0252815537047621 1.0410373510938444 1.0062933647352783 0.985591492513453 1.1548892323416615 0.9096903349903231 1.1448731556051999 0.8329232590198332 0.8710426065927157 1.1554920632332955 1.0 10.946689025861826 -8.265998373807852 24.999060296605563 0.929438419573451 1.0346335079801183 0.06988097550095362 0.10196532984821964 382.2343891680697 2095963.2229343087 0.012891795768607255 0.015846925057015283 5.420029198983803e-09 8.265998373807852 0.10519508840666736 QVS(ph)VSSTDSLDEDRIDEPDGLGPR ddPTM_A549_MK2206_60min_R1 2 QVSVSSTDSLDEDRIDEPDGLGPR 24 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 QVS(0.559)VS(0.137)S(0.137)T(0.137)DS(0.029)LDEDRIDEPDGLGPR;QVS(0.472)VS(0.167)S(0.167)T(0.167)DS(0.027)LDEDRIDEPDGLGPR 56.913999999999994 0.00083494 1303990.0 581.84 792.99 522.31 441.96 944.5500000000001 890.8299999999999 594.26 581.29 1093.02 841.5899999999999 965.01 True False 680.0403673777625 833.3498038658561 596.3814119166088 550.2402198403381 805.6079462378192 985.0970393149038 702.2293497739657 663.6896376259643 845.4527151942756 651.47423449036 725.3713840789081 0.9375064722759806 1.1488594975718007 0.8221738891366752 0.7585634502787075 1.1106144575317058 1.3580588660328816 0.9680962954799649 0.9149652883932434 1.165544621349861 0.8981250829430164 1.0 9.502576021846403 -6.812071927423858 24.999103621874085 1.0822333124604377 0.9265944746816449 0.1579823328500869 0.15200152034557673 129.07527428203795 63728.650093236145 0.021411736679856564 0.0404644220726219 1.5414451391837214e-07 6.812071927423858 -0.15563883777879284 QVS(ph)VSSTDSLDEDRIDEPDGLGPR ddPTM_A549_PD325901_60min_R1 2 QVSVSSTDSLDEDRIDEPDGLGPR 24 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 QVS(0.756)VS(0.078)S(0.078)T(0.078)DS(0.011)LDEDRIDEPDGLGPR;QVS(0.706)VS(0.096)S(0.096)T(0.096)DS(0.007)LDEDRIDEPDGLGPR 87.439 9.9588e-08 2807700.0 653.98 741.89 620.02 397.1 1089.65 539.9200000000001 628.6800000000001 685.52 960.96 775.79 726.51 True False 720.3715681653696 804.4116739631811 662.0982856831417 421.6279651204658 1013.1167430884268 535.5230705299056 652.6047614268963 671.8467658199636 920.5741930284173 726.8064870028503 637.1538757263382 1.1306084693342962 1.2625076996450402 1.039149742169217 0.6617364834198353 1.590066044773723 0.8404925261098407 1.0242498496661336 1.0544497827217583 1.4448224017769453 1.1407079430762475 1.0 9.31549802212855 QVSS(ph)PSFTNR ddPTM_A549_MK2206_60min_R1 2 QVSSPSFTNR 10 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 QVS(0.092)S(0.895)PS(0.013)FTNR;QVS(0.184)S(0.786)PS(0.03)FTNR 132.03 1.0415000000000001e-06 30537000.0 7631.7 10543.5 8283.7 9734.5 9909.8 10065.0 9124.0 10005.1 10435.8 11895.099999999999 12066.5 True False 8919.744382849007 11080.119115070365 9458.453221063375 12119.452936998307 8452.081547432683 11130.071619393728 10781.712697031044 11423.353564333702 8072.107962548186 9207.988648494262 9070.055031541795 0.9834278129327693 1.2216154231190905 1.0428220322997928 1.3362050059070207 0.9318666224229001 1.227122832296835 1.1887152458873547 1.259458021435166 0.8899734273360885 1.015207583247598 1.0 13.146895588832818 -8.770310430089852 24.998000295650872 0.9480429998881642 1.150734874887813 0.3083138373526956 0.11933317649907513 134.32269490297625 378510.8196456869 0.019057245835508666 0.02043372985136425 1.6970301957350176e-09 8.770310430089852 0.2026918749996488 QVSS(ph)PSFTNR ddPTM_A549_PD325901_60min_R1 2 QVSSPSFTNR 10 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 QVS(0.049)S(0.838)PS(0.114)FTNR;QVS(0.125)S(0.857)PS(0.018)FTNR 113.93 9.9492e-05 39377000.0 17361.7 18745.699999999997 16408.3 16578.7 17734.5 17647.2 16225.9 17835.2 16987.5 16796.2 17365.7 True False 19124.247002991986 20325.465927039862 17521.865909123408 17602.728646040458 16488.889900703623 17503.487054110512 16843.385503653168 17479.46294455628 16273.57445062254 15735.685065542568 15229.828990242224 1.2557098976780976 1.3345826758831252 1.150496563050688 1.155806060417261 1.0826707188418256 1.1492897960525377 1.1059471195930533 1.1477123581463324 1.068532973091756 1.033214823070203 1.0 13.894612122010596 -2.000000000027029 0.15399596819960723 0.977683049195625 2.1639399377122492 0.7517197070140238 0.0455759425791239 18.968060528193046 0.18071650943787299 0.07344067166314319 5.102940710808798 0.009999999999377633 2.000000000027029 1.1862568885166243 QVTCENSPKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 QVTCENSPKSPK 12 1 A0A087X0P0;Q02224-3;Q02224 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E 1 QVT(0.041)CENS(0.179)PKS(0.78)PK;QVTCENS(0.002)PKS(0.998)PK 83.54 0.00015519 19048900.0 3235.0 3726.3 3587.8 3680.7 4532.5 3655.5 4348.700000000001 3978.6000000000004 5859.0 5095.0 5446.3 True False 3780.9889118435653 3915.952753685846 4096.603989344276 4582.4716652329 3865.775254166443 4042.3225836754864 5138.802499515439 4542.578733951492 4531.945854900427 3944.0359613688197 4093.8333997668005 0.9235815292480989 0.9565491243265817 1.0006767714527984 1.1193595873964812 0.9442922749095387 0.9874174615668903 1.2552544272583648 1.1096149477431723 1.1070176561553733 0.9634090047712949 1.0 11.999236677150225 QVTCENSPKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 QVTCENSPKSPK 12 1 A0A087X0P0;Q02224-3;Q02224 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E 1 QVTCENS(0.246)PKS(0.753)PK;QVTCENS(0.002)PKS(0.998)PK 90.348 7.603199999999999e-05 15658600.0 6279.1 6524.9 6043.3 5745.5 7111.200000000001 6953.2 7456.9 7051.700000000001 6621.0 6958.9 7659.6 True False 6916.549609570889 7074.776222138544 6453.434679315074 6100.38648602276 6611.733844308194 6896.575444526115 7740.676410072246 6911.048311548366 6342.742395147716 6519.513866386695 6717.517758204931 1.0296287793393408 1.053183106735706 0.9606874014486527 0.9081310545955175 0.9842525293263974 1.026655335016045 1.1523120129630628 1.0288098312962481 0.9442092486321371 0.9705242473566386 1.0 12.713712514765854 -8.746214987675797 24.82863494741015 0.9736543653329762 1.0172067225982835 0.1104070598479816 0.05852332762112891 428.25325770662573 698414.9184698963 0.01099258458104661 0.012439979084934901 1.7938454043455724e-09 8.746214987675797 0.04355235726530726 QVTDAETKPKSPCT(ph) ddPTM_A549_MK2206_60min_R1 1 QVTDAETKPKSPCT 14 2 O43684 O43684 BUB3 Mitotic checkpoint protein BUB3 1 QVTDAET(0.002)KPKS(0.125)PCT(0.872) 73.138 0.0020476 15177000.0 4661.7 5792.5 5229.2 4233.6 6659.0 5313.4 5148.6 4973.2 7531.5 7329.0 7754.6 True False 5448.48099237748 6087.313508232098 5970.779190891103 5270.832190053524 5679.469921123963 5875.660461250534 6084.033975442128 5678.166329786242 5825.62727533411 5673.373809788439 5828.918803927736 0.9347326966891522 1.044329782760097 1.0243373414067418 0.9042555519047283 0.9743607883672922 1.0080189240741013 1.0437671513527493 0.9741371463195008 0.9994353106117367 0.9733149492433338 1.0 12.509012589894308 -7.258591175982369 23.496181283349863 1.0017814490290915 0.9788317305297067 0.07679281124826975 0.03962552970338957 245.21911081863652 2022911.4969247396 0.005614335893559591 0.00946185148794233 5.513264445048581e-08 7.258591175982369 -0.022949718499384764 QVTDAETKPKSPCT(ph) ddPTM_A549_PD325901_60min_R1 1 QVTDAETKPKSPCT 14 2 O43684 O43684 BUB3 Mitotic checkpoint protein BUB3 1 QVTDAET(0.007)KPKS(0.368)PCT(0.625) 73.138 0.0020476 24866000.0 6654.2 7195.9 7726.2 5965.6 7635.2 6217.6 6859.6 7544.2 5986.0 8446.5 7755.2 True False 7329.729485436869 7802.323747013246 8250.546393414876 6334.081563139391 7098.929892010058 6166.965927038714 7120.645831717151 7393.725012689593 5734.429236875735 7913.186548511289 6801.35956426326 1.0776859267887926 1.1471711903028043 1.2130731092010123 0.9312963832144513 1.043751594800301 0.9067254669848843 1.0469444769736236 1.0870951524955144 0.8431298452454193 1.1634712844899364 1.0 12.731607448755312 -6.26992755341823 24.902373883948695 0.9519338031385707 1.1460961882385086 0.18440263448140715 0.09828512561104923 357.597133682497 1049108.8486550362 0.012285362042137638 0.02897267473226389 5.371213884898885e-07 6.26992755341823 0.19416238509993788 QVVESAY(ph)EVIK ddPTM_A549_MK2206_60min_R1 1 QVVESAYEVIK 11 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 1 QVVES(0.011)AY(0.989)EVIK 167.18 1.4799e-14 4712200.0 4173.5 4258.2 3747.5 4169.9 5458.6 4362.5 3497.8 4040.4 6493.2 4678.4 5272.9 True False 4877.884767721525 4474.924191757257 4278.951850735178 5191.5256871939255 4655.647170963694 4824.1368544068655 4133.30498374344 4613.139073206052 5022.5005675097145 3621.5461907100876 3963.4934053633424 1.230703389368793 1.1290353569661182 1.079591010532517 1.3098358332497355 1.1746322485774139 1.2171426469081323 1.0428439159632032 1.163907341680856 1.2671903429215599 0.9137258020435869 1.0 11.952556860638643 -10.981056421853046 1.2348278931181775 0.9993623328376512 1.1844932847093137 0.5193668595665637 0.0795877140614077 0.35090104668908095 0.9464352431192764 0.054989606942691394 0.01246092114066265 1.044584502041908e-11 10.981056421853046 0.1851309518716625 QVVESAY(ph)EVIK ddPTM_A549_PD325901_60min_R1 2 QVVESAYEVIK 11 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 1 QVVESAY(1)EVIK;QVVES(0.006)AY(0.994)EVIK 189.13 7.0003e-19 17574800.0 8938.4 9244.599999999999 10015.6 9532.1 12260.599999999999 10619.7 11327.7 11659.8 10726.7 11466.7 10193.6 True False 9845.819787897697 10023.674885926524 10695.318844695457 10120.8761680302 11399.4577527738 10533.216684150311 11758.781822255285 11427.236142063852 10275.894102104065 10742.690605080737 8939.851822554414 1.101340378266406 1.1212350142804075 1.1963642191151496 1.1321078211269868 1.275128265998104 1.178231685851435 1.315321781127174 1.2782355198812132 1.1494479221880323 1.2016631615725362 1.0 13.126035203695114 -9.958348140115131 0.9267058033889222 1.0172649885840535 1.1974056061405747 0.005873241704402066 0.08657394396979884 0.2984185045597256 0.5212453206832319 0.02708232064594751 0.014092732343843378 1.1006566449623867e-10 9.958348140115131 0.18014061755652122 QVVESAYEVIK ddPTM_A549_MK2206_60min_R1 2 QVVESAYEVIK 11 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 204.69 5.6753e-24 23552000.0 4929.799999999999 6098.6 5939.5 5048.5 8047.2 6326.1 5640.2 5985.1 8191.299999999999 7208.4 7498.9 False True 5761.829717961793 6408.992690773288 6781.810411592159 6285.382726635774 6863.46754006138 6995.523703074679 6664.95133206866 6833.506253600027 6335.983628818205 5580.017433548774 5636.716170888723 1.0221961765112866 1.1370082325367115 1.2031491751558057 1.1150788040556558 1.2176358241183605 1.2410636780336088 1.1824174093580124 1.2123204444623668 1.1240558219945338 0.9899411757447049 1.0 12.460639209040183 -9.931099750887526 0.8277414188209585 1.0118322350833335 1.1680298160064033 0.5331322178660879 0.05946523498235113 0.3282349331066207 0.4599604797512238 0.025136769577900252 0.012394579111918859 1.1719261608823496e-10 9.931099750887526 0.1561975809230698 QVVESAYEVIK ddPTM_A549_PD325901_60min_R1 2 QVVESAYEVIK 11 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 184.88 3.3355999999999998e-18 33315000.0 7738.6 7251.9 8494.4 7267.6 9550.8 8322.3 9073.4 8311.0 8814.8 8198.8 8852.400000000001 False True 8524.216975143781 7863.043063545268 9070.881064976744 7716.503146082847 8879.984756471302 8254.525948049766 9418.693202154996 8145.23058514663 8444.344610292723 7681.126368784037 7763.610919987115 1.0979706560511058 1.012807460933181 1.1683842941722018 0.9939322340609585 1.143795696099366 1.0632328220878262 1.2131845991801233 1.0491549189021117 1.0876826128101145 0.9893754913720979 1.0 12.922512102627307 -10.443052078991343 0.7308565945960693 0.998327882191686 1.0928701357032893 0.2672682513368053 0.0618546660644804 0.7764363137472293 0.7322410908106185 0.041323603065420295 0.01132244410117427 3.605354063540647e-11 10.443052078991343 0.09454225351160328 QVVNIPSFIVR ddPTM_A549_MK2206_60min_R1 2 QVVNIPSFIVR 11 0 P46781 P46781 RPS9 40S ribosomal protein S9 0 ; 74.944 0.0037766999999999996 2310470.0 3616.2 4726.9 3713.4 3773.7 5490.0 4316.4 3976.8999999999996 4141.0 5617.8 5985.4 5765.7 False True 4226.526152398363 4967.479019777693 4240.015957977323 4698.2566694078305 4682.428272559023 4773.158583005571 4699.451252172592 4727.999431280634 4345.37726978317 4633.293982959163 4333.917564775248 0.9752207071842506 1.1461867803282273 0.9783333195903104 1.0840669207909766 1.080414706227078 1.1013496476721982 1.0843425565747464 1.0909297098099793 1.0026441908127333 1.069077552516724 1.0 12.081455996925929 -8.77343148844739 24.54769142917186 1.0012486342161449 1.069907564496639 0.07996979851010522 0.0519825355000504 144.24566427891918 295267.9525878009 0.0074242212028820635 0.007934421073292024 1.6848782015462304e-09 8.77343148844739 0.06865893028049408 QVVNIPSFIVR ddPTM_A549_PD325901_60min_R1 2 QVVNIPSFIVR 11 0 P46781 P46781 RPS9 40S ribosomal protein S9 0 ; 85.958 0.0010614 4891900.0 6731.799999999999 7015.4 6969.3 7081.0 7899.5 7021.200000000001 6609.9 7296.8 7483.8 7469.5 7794.6 False True 7415.207380310763 7606.612378548438 7442.278607805427 7518.377287882194 7344.666371795556 6964.021675071439 6861.443361576064 7151.259599771138 7169.281911615537 6997.874495247154 6835.913614040436 1.0847426984859057 1.1127426132075522 1.0887028461740014 1.0998350348430428 1.0744235206118142 1.018740444696065 1.003734650403304 1.0461307739587296 1.0487671899320652 1.0236926459799116 1.0 12.738918450344523 -7.116458322958974 3.274271959589293 1.0235958648591288 1.096620018401789 0.8328272123182209 0.015499081053631533 0.09967421306743783 2.0112121165509143 0.003087080204832373 0.005626963349025775 7.64789077850284e-08 7.116458322958974 0.07302415354266012 QVVQTPNTVLS(ph)TPFR ddPTM_A549_PD325901_60min_R1 1 QVVQTPNTVLSTPFR 15 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 QVVQTPNT(0.001)VLS(0.638)T(0.362)PFR 134.9 1.4986e-09 3398400.0 2911.5 2904.2 3341.9 3248.3 3656.7 3034.7 3936.9 3622.2 3617.8 3843.8 4398.7 True False 3207.073336666983 3148.947126290788 3568.7014304772315 3448.9401135754474 3399.866006930161 3009.9864093515794 4086.72088385434 3549.952379439071 3465.756447238394 3601.101812012988 3857.687785656693 0.8313460069503897 0.8162783774257003 0.9250881949923618 0.8940433506306512 0.8813222313042637 0.7802566139600616 1.0593705636441646 0.9202280165435327 0.8984025249851626 0.9334871073294941 1.0 11.913520671099485 -7.752098050160378 24.999995865022406 0.9552333941141384 0.8591698547531244 0.4884360188576504 0.05449764473451478 161.36292114228067 431850.6569129092 0.009142573893931095 0.013457844137733637 1.769709367984603e-08 7.752098050160378 -0.09606353936101408 QVVQTPNTVLST(ph)PFR ddPTM_A549_MK2206_60min_R1 2 QVVQTPNTVLSTPFR 15 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 QVVQT(0.002)PNT(0.031)VLS(0.22)T(0.747)PFR;QVVQTPNTVLS(0.006)T(0.994)PFR 152.88 1.8064e-14 5592700.0 2370.2 2644.8999999999996 2829.1000000000004 2473.6 3661.9 2874.7 2582.8999999999996 2968.0 4198.7 4140.6 4377.1 True False 2770.2318141736087 2779.514112718699 3230.3089208578795 3079.6321110441227 3123.2393608895964 3178.8988459285797 3052.1794964008627 3388.7230891187887 3247.7011539461373 3205.235584228409 3290.1452681856063 0.8419785718766422 0.844799814645114 0.9818134634034793 0.936017063083183 0.9492709611001303 0.9661879907453524 0.927673171733243 1.0299615405697709 0.9870996230318805 0.9741927249297349 1.0 11.683935568642122 -2.9744206183451016 0.351726359876521 0.9963437756504199 2.81581058998424e-13 0.686807491096594 0.03181430570238528 9.554407574951814 0.22303059614041612 0.0076984535221936035 5.715394851056991 0.0010606677927124581 2.9744206183451016 -0.9963437756501383 QVVQTPNTVLST(ph)PFR ddPTM_A549_PD325901_60min_R1 1 QVVQTPNTVLSTPFR 15 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 QVVQTPNTVLS(0.304)T(0.696)PFR 148.7 8.5161e-14 3991000.0 2443.7 2320.6 2532.8 2213.0 3292.8 3021.6 2922.3 3169.8 3026.9 3230.8 3471.2 True False 2691.782625043141 2516.1651061464095 2704.6910389636823 2349.6919839123416 3061.5250875433135 2996.9930914082884 3033.509725643921 3106.5758523400054 2899.6899193282934 3026.8067366282226 3044.2644057497732 0.8842144657208842 0.8265264677385018 0.8884547064490421 0.7718422813322073 1.0056699023123417 0.9844720076704894 0.996467231924553 1.020468473918541 0.9525092215549942 0.9942653899941878 1.0 11.571877952405655 -6.774896664524728 24.999995669001873 0.9839962882208716 0.8448639201196011 0.8213572944908654 0.033609784297406776 71.45706870093031 132747.9252222145 0.004785060330498799 0.009078881966614284 1.6792035181364327e-07 6.774896664524728 -0.1391323681012705 QVVSVVQDEEVGLPFEAS(ph)PESPPPASPDGVTEIR ddPTM_A549_MK2206_60min_R1 1 QVVSVVQDEEVGLPFEASPESPPPASPDGVTEIR 34 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 QVVSVVQDEEVGLPFEAS(0.499)PES(0.499)PPPAS(0.002)PDGVTEIR 97.243 6.035e-10 16603000.0 8087.8 10962.0 8676.3 8288.8 14317.0 10494.0 9904.0 9796.2 15216.0 13032.0 13937.0 True False 9452.822912274623 11519.91897751234 9906.729804545334 10319.556372098368 12210.988265615213 11604.468114646572 11703.428600547495 11184.841349604274 11769.600294959015 10088.06214888292 10476.058258368053 0.9023263024261925 1.099642508031155 0.9456543253405495 0.9850609950412719 1.1656090453545669 1.107713209343521 1.1171595567635417 1.067657421690077 1.1234760254943892 0.9629635403015051 1.0 13.354808367338853 -6.656411460488089 24.411298835044718 1.0748267842099777 0.9888044942908277 0.2978462433694803 0.0695997851602072 9.11549193671708 2095.71529971849 0.009703145495240723 0.02019870802287962 2.2059138096733491e-07 6.656411460488089 -0.08602228991914995 QVYDAHTK ddPTM_A549_MK2206_60min_R1 1 QVYDAHTK 8 0 C9JKI3;Q03135-2;Q03135;E9PCT5 C9JKI3;Q03135 CAV1 Caveolin;Caveolin-1 0 66.62100000000001 0.0090217 2774800.0 1333.8 1767.7 1454.6 1197.9 2132.0 1375.8 1428.4 1518.5 2117.7 2144.2 2301.7 False True 1558.9128317208504 1857.6683795428357 1660.8841526562758 1491.385553775774 1818.3856242433228 1521.3862428178725 1687.9217904909176 1733.7520252112135 1638.044331271996 1659.8237307884247 1730.1243663116688 0.9010409090094417 1.073719563584362 0.9599796320983552 0.8620106061826958 1.051014400843225 0.8793507983828985 0.9756072010529971 1.0020967619265881 0.9467783722184251 0.959366715542471 1.0 10.756660031317287 -10.967147877803491 1.1143121636373698 1.0009844365453562 0.9618978828789606 0.0 0.06360785435737681 1.4633509025399383 3.0912002314629907 0.046279330718529924 0.009629271024572516 1.0785794020882537e-11 10.967147877803491 -0.039086553666395574 QVYDAHTK ddPTM_A549_PD325901_60min_R1 1 QVYDAHTK 8 0 C9JKI3;Q03135-2;Q03135;E9PCT5 C9JKI3;Q03135 CAV1 Caveolin;Caveolin-1 0 94.309 0.0087794 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 QWLQEIDR ddPTM_A549_PD325901_60min_R1 2 QWLQEIDR 8 0 P62820;E7END7;P62820-2;Q92928;Q9H0U4;E9PLD0 P62820;Q9H0U4 RAB1A;RAB1C;RAB1B Ras-related protein Rab-1A;Putative Ras-related protein Rab-1C;Ras-related protein Rab-1B 0 ; 80.438 0.010826 2467900.0 2224.9 2049.5 2189.8 2165.2 2390.2 1947.3600000000001 2008.56 2063.9 2058.66 2274.3999999999996 2671.7 False True 2450.7702101151895 2222.218557720876 2338.412996337127 2298.9394864740198 2222.3205977423554 1931.5013458051503 2084.9968499262054 2022.733895401772 1972.141679382993 2130.793995848468 2343.0978373017 1.0459529991020282 0.9484104856159025 0.9980005781704924 0.9811538595936169 0.9484540348095617 0.8243366175564644 0.8898462611050324 0.8632733397642253 0.8416813194851913 0.9093918153679318 1.0 11.194201480622867 -6.918934595070654 4.007271517106283 0.9083720845984322 0.9901449318907581 0.46803601459176036 0.04999340314199998 0.2585659820429339 8.058439045699455 0.010028427701812052 0.01947477453953177 1.2052174329509788e-07 6.918934595070654 0.08177284729232592 QWTSLS(ph)LR ddPTM_A549_MK2206_60min_R1 2 QWTSLSLR 8 0 Q9UHB6;Q9UHB6-4;F8VRN8;F8VVQ7;F8VTU2 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 QWT(0.001)S(0.011)LS(0.988)LR;QWTS(0.003)LS(0.997)LR 83.869 0.0032698999999999996 7342300.0 2834.3999999999996 2959.8 1695.08 1511.27 3194.5 2515.6 1990.05 1814.27 3309.0 3490.1 3166.9 True False 3312.7774255732324 3110.4411776720503 1935.467832726935 1881.5312178434883 2724.5932817285625 2781.799122279866 2351.61632537556 2071.4483284688495 2559.5167833871824 2701.683986020281 2380.471328006442 1.391647690353642 1.3066492929687716 0.8130607623607964 0.7904028062456027 1.1445604278755628 1.1685917362464187 0.9878784498299137 0.8701841119017434 1.075214287722879 1.1349365792541777 1.0 11.217031536874115 -5.624838213252718 6.817374817393691 1.01095934060154 1.370052767486278 0.5419286614674157 0.12480759224849793 0.11084724942196553 6.292242474355056 0.016797475102158992 0.0663666053051118 2.372257272745058e-06 5.624838213252718 0.3590934268847379 QWTSLS(ph)LR ddPTM_A549_PD325901_60min_R1 1 QWTSLSLR 8 0 Q9UHB6;Q9UHB6-4;F8VRN8;F8VVQ7;F8VTU2 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 QWT(0.002)S(0.017)LS(0.982)LR 66.92 0.0082526 3788800.0 995.88 799.61 929.77 711.79 1134.5 906.34 839.15 906.02 1235.2 1082.8 985.84 True False 1096.9810044718927 866.9959409315386 992.8697833612066 755.7556517076214 1054.816633812527 898.959067536069 871.084312450499 887.94872034106 1183.2888395237062 1014.4318232081963 864.5879297546535 1.2687905610516514 1.0027851547471505 1.1483734033193778 0.8741223717084325 1.2200223916055077 1.039754357652401 1.0075138484730974 1.027019565948643 1.3686159600441004 1.1733124975455815 1.0 9.755868885128763 QWVES(ph)SPKPMVSLLGSGR ddPTM_A549_MK2206_60min_R1 1 QWVESSPKPMVSLLGSGR 18 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 QWVES(0.514)S(0.449)PKPMVS(0.015)LLGS(0.022)GR 48.685 0.005644 1827900.0 2090.0 1651.6 1762.4 1630.6 2878.4 1934.4 1809.2 2170.5 2749.2 2611.7 2643.9 True False 2442.74090440589 1735.65938544603 2012.3348210101888 2030.0970732004157 2454.991172993422 2139.096924049203 2137.9082213358784 2478.175021877472 2126.510589570277 2021.7151560955747 1987.3466620721304 1.2291468574782707 0.8733551214644778 1.012573628655206 1.0215113004410168 1.2353109901992119 1.0763582241956964 1.0757600886333354 1.2469767198509663 1.0700249886716018 1.0172936582627259 1.0 10.95662783517116 -4.904256279288529 17.670861832689827 1.0554086772017768 9.777091953498225 0.18144952278159576 0.1003539669159115 163.9890696071548 30329.87233367567 0.013533538749966033 119.2080904068701 1.246647644298738e-05 4.904256279288529 8.721683276296448 QWVES(ph)SPKPMVSLLGSGR ddPTM_A549_PD325901_60min_R1 1 QWVESSPKPMVSLLGSGR 18 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 QWVES(0.543)S(0.456)PKPMVSLLGS(0.001)GR 45.395 0.01039 3829000.0 2399.8 2359.5 2226.8 2131.6 2742.9 2685.5 2456.0 2780.1 2665.4 2659.4 2871.1 True False 2643.4259293606146 2558.343345665971 2377.924038836202 2263.264090785155 2550.248166491303 2663.630178374687 2549.4644239747668 2724.6487245537405 2553.38250717818 2491.485030143956 2517.9729014024465 1.0498230254536474 1.0160329145087459 0.9443803138277457 0.8988437046024502 1.012817955693995 1.0578470391365662 1.012506696380561 1.0820802412274497 1.014062742992989 0.9894804780290775 1.0 11.298047041419304 -6.963747718388561 24.99999040510988 1.0175137185801189 0.9749571706738731 0.2013701936821809 0.04363641291234744 244.74741033866164 168779.72584608916 0.006468458802128735 0.012224207560152554 1.0870569114687603e-07 6.963747718388561 -0.042556547906245745 QWVES(ph)SPKPMVSLLGSGRPTGSPLSAEFSGTR ddPTM_A549_PD325901_60min_R1 3 QWVESSPKPMVSLLGSGRPTGSPLSAEFSGTR 32 2 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 QWVES(0.529)S(0.469)PKPMVS(0.001)LLGS(0.001)GRPTGSPLSAEFSGTR;QWVES(0.531)S(0.469)PKPMVSLLGSGRPTGSPLSAEFSGTR;QWVES(0.498)S(0.498)PKPMVS(0.001)LLGS(0.001)GRPTGSPLSAEFSGTR 66.658 0.00015627 13395400.0 5577.9 5115.5 5425.2 5600.2 5690.3 5128.9 6078.7 5923.9 6277.1 6192.0 6201.1 True False 6144.16430176705 5546.601137848808 5793.386696377832 5946.111635023 5290.632958469301 5087.131938881378 6310.028254892269 5805.7431672903485 6013.295316203249 5801.036063266668 5438.404012011672 1.1297734203263645 1.019895014345783 1.0652733198162765 1.0933559959668253 0.9728282317356355 0.9354089780100102 1.1602720652889085 1.0675453964926738 1.1057095616511439 1.066679866088297 1.0 12.408967615957636 -11.098482131547296 1.4612428460931417 1.0002884009093553 1.0640574159533769 0.0 0.065400117931657 0.7319384803725097 2.8139993693098306 0.044664340634570504 0.009940396616961925 7.971092858874176e-12 11.098482131547296 0.06376901504402155 QWVESSPKPMVSLLGS(ph)GRPTGSPLSAEFSGTR ddPTM_A549_PD325901_60min_R1 1 QWVESSPKPMVSLLGSGRPTGSPLSAEFSGTR 32 2 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 QWVES(0.005)S(0.005)PKPMVS(0.103)LLGS(0.292)GRPT(0.292)GS(0.292)PLS(0.01)AEFS(0.001)GT(0.001)R 45.809 0.0065536 9427600.0 1974.8 2264.0 2175.2 1981.3 2195.2 2260.0 2352.7 2463.5 2477.9 2294.9 2861.4 True False 2175.2802422290774 2454.795225508691 2322.8221525401946 2103.680401141222 2041.0167250288757 2241.595309300611 2442.23328594684 2414.3635599216354 2373.762480129366 2149.9996223499156 2509.4659399090797 0.8668299527938164 0.9782142034562264 0.9256241001718288 0.8382980488738733 0.8133271277245643 0.8932559209717053 0.9732083815552104 0.9621025420289666 0.9459233705381033 0.8567558491859077 1.0 11.293164649704426 -7.746603181080624 6.163658382205732 0.9726975987614115 0.8861030719312091 0.18001183830277145 0.05480402904096958 0.11706819881479533 15.913501872849894 0.007298895289717451 0.0106199937571655 1.7922426949921143e-08 7.746603181080624 -0.08659452683020241 QYAENYTRPS(ph)SR ddPTM_A549_MK2206_60min_R1 2 QYAENYTRPSSR 12 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 QYAENYT(0.001)RPS(0.599)S(0.4)R;QYAENYTRPS(0.652)S(0.347)R 94.551 0.00021719999999999997 73069400.0 4632.7 5385.0 3992.2 3400.5 5524.6 4595.6 4363.8 4222.9 5270.9 6794.9 5998.9 True False 5414.58650135941 5659.07349880532 4558.353990261501 4233.622652654247 4711.938658393368 5081.903341687613 5156.645974057875 4821.50900708886 4077.0495658977056 5259.927370737 4509.20756878267 1.2007844879097374 1.2550039918284521 1.0108991260058802 0.9388839586724056 1.0449593607121148 1.1270058572751733 1.143581415448123 1.0692586077581034 0.9041609869821025 1.1664859713160196 1.0 12.138658206604903 -8.642010396784233 5.783009486770501 0.955000737827202 1.0981656106079998 0.0 0.10588314482938938 0.18390135419716525 8.700949367320518 0.0160288293906588 0.018164150662293155 2.2802874824495284e-09 8.642010396784233 0.1431648727807978 QYAENYTRPS(ph)SR ddPTM_A549_PD325901_60min_R1 1 QYAENYTRPSSR 12 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 QYAENYT(0.009)RPS(0.6)S(0.391)R 73.834 0.00038392 69630000.0 6479.6 7643.9 6726.8 5499.6 8899.2 6048.1 6732.1 7783.2 7717.0 7423.2 7239.5 True False 7137.404221970591 8288.078279269379 7183.321099534469 5839.297801502178 8274.150892573334 5998.846278841167 6988.293749446475 7627.957970197718 7392.681326590387 6954.49788514876 6349.087394971619 1.1241622264679025 1.3053967859748492 1.131394270178664 0.9197066347089211 1.3032031814724012 0.9448359906956333 1.1006768870406631 1.2014258893709584 1.16436912373348 1.0953539386867817 1.0 12.632333521370876 -10.804954722051978 1.019864412528593 0.9989466948092974 1.1336901386128597 0.051003583842474054 0.11850604061079824 0.8093980366006123 1.4762845640400306 0.07926781885582505 0.019172640374483376 1.5669144223369594e-11 10.804954722051978 0.1347434438035623 QYAENYTRPSS(ph)R ddPTM_A549_MK2206_60min_R1 2 QYAENYTRPSSR 12 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 QYAENYT(0.001)RPS(0.233)S(0.766)R;QYAENYTRPS(0.201)S(0.799)R 81.327 0.00020734 70109600.0 5906.599999999999 6825.4 5357.8 5394.0 7060.799999999999 6161.6 5209.6 5167.0 6720.7 9030.6 8510.5 True False 6903.4896774946565 7172.783706359486 6117.616604634805 6715.530242145863 6022.1656733852 6813.6164222609395 6156.116885845338 5899.438073273855 5198.472180752565 6990.581187975913 6397.107972149047 1.0791579112858862 1.1212541257060975 0.9563097310955111 1.049775972421151 0.9413887806183316 1.0651088666824504 0.9623281196201617 0.9222039238602995 0.8126284882770531 1.0927721117746734 1.0 12.643204118335023 -8.006555144565072 3.1063891933948358 0.9101151496251958 1.0321635505648359 0.0864820130801307 0.08362892330776728 0.22831940699492395 4.536704217568933 0.013091768212451177 0.017909747661944433 9.850195619515581e-09 8.006555144565072 0.12204840093964009 QYAENYTRPSS(ph)R ddPTM_A549_PD325901_60min_R1 3 QYAENYTRPSSR 12 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 QYAENYTRPS(0.042)S(0.958)R;QYAENYTRPS(0.207)S(0.793)R;QYAENYTRPS(0.019)S(0.981)R 115.79 3.2135e-13 112465200.0 10214.2 10617.8 9608.7 8506.7 13504.900000000001 9148.4 10542.8 9319.7 11570.4 10778.8 11262.5 True False 11251.13806470339 11512.59926917234 10260.804163806994 9032.139538882566 12556.362413375768 9073.898463542357 10944.012023241521 9133.811272336789 11084.136325149853 10098.22472847848 9877.283898869786 1.139092303096685 1.1655632648657266 1.038828514889715 0.9144355504367019 1.2712363582879842 0.9186633244976024 1.1079981232992397 0.924729041491045 1.1221846449526638 1.0223685814714687 1.0 13.269898662064538 -5.76287904979144 24.988392920797413 1.047734308970178 1.152327808372689 0.1576607497026693 0.10092192222518337 49.08246180508403 852011.6254666505 0.012827518215604409 0.04330135228083901 1.7263186015807907e-06 5.76287904979144 0.10459349940251106 QYAS(ph)LPR ddPTM_A549_MK2206_60min_R1 1 QYASLPR 7 0 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;A0A087WYL6;Q8TEW8-6;Q8TEW8-3 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 QYAS(1)LPR 52.255 0.047771 1541100.0 711.95 452.05 672.18 628.01 745.09 675.56 716.22 566.85 783.58 691.35 808.61 True False 832.1097544936717 475.05741413833744 767.5052314949096 781.8724781924407 635.4882480147545 747.0473107995647 846.3479030981551 647.2027234053188 606.1003811201359 535.173554836572 607.8098204993178 1.3690297958826838 0.7815889084320424 1.2627391095201481 1.2863768432535851 1.045537973527145 1.2290806854451 1.3924551307888997 1.0648112313710885 0.9971875423503728 0.8804950772215643 1.0 9.247476174722472 -8.511530011098147 23.660656198314225 1.000373316675017 1.1843934050054352 0.28147326785239635 0.16288012235080623 291.6315012832212 608015.1804877729 0.02492616887757193 0.029259571686618045 3.079427536138523e-09 8.511530011098147 0.18402008833041816 QYDEDGHTSEEKEGDATKDS(ph)LDDLFPNEEEEDPSNGLSR ddPTM_A549_PD325901_60min_R1 1 QYDEDGHTSEEKEGDATKDSLDDLFPNEEEEDPSNGLSR 39 2 Q9NSK0;Q9NSK0-3;C9JZE5;C9J8T5;Q9NSK0-4 Q9NSK0 KLC4 Kinesin light chain 4 1 QYDEDGHT(0.22)S(0.22)EEKEGDAT(0.258)KDS(0.303)LDDLFPNEEEEDPSNGLSR 86.227 1.3229e-07 7233900.0 674.04 805.59 878.98 937.76 838.59 563.03 829.62 691.99 887.11 830.53 985.73 True False 742.468044597978 873.479896518351 938.6328685361249 995.6833053925163 779.690331378446 558.4448703520014 861.1916430854835 678.1877165943464 849.8278517081246 778.0901940608638 864.4914590573068 0.8588494852310161 1.0103973698836144 1.0857630329392338 1.1517560930888422 0.9019063441397871 0.6459807838483022 0.996182939765048 0.7844932526388206 0.9830378805995698 0.9000553862143877 1.0 9.755707900274396 -5.245974255832204 22.499870699984953 0.9685969301126136 0.858849192225409 0.008867923293886082 0.13419763511076122 1825.0819749354957 2655086.9669782775 0.018192882424782633 0.5229053651868659 5.675782493925861e-06 5.245974255832204 -0.1097477378872046 QYDIS(ph)DPQR ddPTM_A549_PD325901_60min_R1 1 QYDISDPQR 9 0 H0Y532;Q13228-2;Q13228-3;Q13228;Q13228-4 H0Y532 SELENBP1 Selenium-binding protein 1 1 QY(0.004)DIS(0.996)DPQR 45.997 0.041244 3398000.0 500.5 371.79 310.17 261.33 454.45 259.22 298.31 498.18 254.18 392.49 628.87 True False 551.3103915513735 403.1220480971185 331.22000140372944 277.4717605765081 422.5309997673892 257.1089982641171 309.66235029149567 488.2434090853504 243.4976985347602 367.70811441723737 551.522976735382 0.9996145488166842 0.7309252109192442 0.6005552177795254 0.5031009990171953 0.766116766827137 0.4661800307686486 0.5614677236558181 0.885263950335123 0.44150055175595915 0.6667140444334777 1.0 9.1072771802726 -11.030614108597245 1.312995641838192 1.0006730524611986 0.6337118026519 0.0 0.19365681302765184 0.3769178003105876 1.1542836906286111 0.12281911678685963 0.027393634089890696 9.319355769859451e-12 11.030614108597245 -0.3669612498092987 QYGNEVFLAK ddPTM_A549_PD325901_60min_R1 2 QYGNEVFLAK 10 0 P50990-2;P50990;P50990-3;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 122.26 0.00010436 4704700.0 6396.8 7200.799999999999 7821.8 7251.5 8694.8 8074.099999999999 7426.0 8283.4 7724.1 7403.0 7744.3 False True 7046.198426924734 7807.636687209794 8352.634384304376 7699.408685648598 8084.107243431614 8008.3472065593205 7708.60049366312 8118.181088798405 7399.482938281298 6935.573316596119 6791.800195162466 1.0374566719355889 1.1495680766302385 1.2298115586871403 1.133632978651608 1.1902745974755866 1.1791199647279604 1.1349863470886048 1.1952915067467191 1.089473000626794 1.0211686323658429 1.0 12.729578302197286 -9.472649462057852 0.8463750743656874 1.0144305963713307 1.1598651434924763 0.5505571160162555 0.049184626762856995 0.25251941521313026 0.3862705073172419 0.015376201951034344 0.01056009649542464 3.367832921261022e-10 9.472649462057852 0.14543454712114556 QYHES(ph)EEES(ph)EEEEAA ddPTM_A549_MK2206_60min_R1 2 QYHESEEESEEEEAA 15 0 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 2 QYHES(1)EEES(1)EEEEAA;QYHES(1)EEES(1)EEEEAA 96.414 1.9769e-05 25531000.0 165.41 641.06 813.73 295.65 836.21 700.5799999999999 792.3700000000001 535.8 658.14 1024.27 1320.67 True False 193.32716411376947 673.6872158113538 929.1291499663076 368.084263272233 713.204616720689 774.7149105926336 936.3333723965894 611.7512908186822 509.0723408336178 792.8866956135902 992.711190362268 0.1947466352658108 0.6786336472801385 0.9359511195066135 0.37078685809707534 0.7184411978477051 0.7804031203777592 0.9432082376898514 0.6162429685067186 0.5128101161505423 0.7987083285766565 1.0 9.95523024505472 -10.92745404366239 1.1385948146162808 1.0034588163081866 0.6436827604258929 0.15373699431811483 0.2193659939406679 0.5357094442528535 1.2143529997900004 0.1542783822009558 0.034933278756367626 1.1818053626548475e-11 10.92745404366239 -0.35977605588229367 QYHES(ph)EEES(ph)EEEEAA ddPTM_A549_PD325901_60min_R1 2 QYHESEEESEEEEAA 15 0 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 2 QYHES(1)EEES(1)EEEEAA;QYHES(1)EEES(1)EEEEAA 125.5 1.6636e-07 56472000.0 3044.2 4009.3 3339.7 3412.1 4802.0 4428.0 3701.7 3807.0 3714.8 3987.7 3773.2 True False 3353.244942978405 4347.177781639576 3566.352125247555 3622.8576675586573 4464.724086000669 4391.939836098721 3842.570219147966 3731.066398466275 3558.6798745649808 3735.91594145486 3309.120320285502 1.0133342454858505 1.3136958952476268 1.077734195213506 1.094809894143132 1.3492178143632638 1.3272227695002023 1.1612059542206186 1.1275100441631474 1.075415678526294 1.128975552370527 1.0 11.692232033950306 -8.773058527173577 1.3211204982225786 1.0262807828305995 1.198381981379757 0.18538302050910005 0.10677196842567846 0.32890071321565056 1.131393100006927 0.020810621318562955 0.022083270298715266 1.686325754412796e-09 8.773058527173577 0.1721011985491574 QYHES(ph)EEESEEEEAA ddPTM_A549_MK2206_60min_R1 1 QYHESEEESEEEEAA 15 0 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 1 QYHES(0.999)EEES(0.001)EEEEAA 67.93 0.0028052 2947600.0 0.0 183.02 241.08 126.91 0.0 112.66 147.77 241.7 249.42 219.5 405.37 True False 0.0 192.33493625837522 275.26876909279184 158.00295569720635 0.0 124.58160642234446 174.6178962341382 275.96171517520605 192.92676824189516 169.9147975506293 304.705441357154 0.0 0.6312159553230096 0.9033930207046793 0.5185432691764981 0.0 0.4088591456308087 0.5730711452227187 0.9056671713707384 0.6331582638715013 0.5576362430346864 1.0 8.251271453333379 -9.923578577724456 0.2827035366329596 1.135052880105576 0.39470004563500594 0.1284321123409563 0.2943219426179238 2.3372111715801056 0.3727079234381207 0.6043441381697487 0.19668412752207076 1.192398503414085e-10 9.923578577724456 -0.74035283447057 QYHES(ph)EEESEEEEAA ddPTM_A549_PD325901_60min_R1 2 QYHESEEESEEEEAA 15 0 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 1 QYHES(1)EEESEEEEAA;QYHES(1)EEESEEEEAA 124.45 2.3625e-07 7600400.0 453.16999999999996 357.1 224.99 329.56 152.34 408.75 366.16999999999996 328.13 186.21 372.21000000000004 398.77 True False 499.1754847938781 387.1940702425589 240.25917437477855 349.91617271493516 141.64016394446935 405.4212755206305 380.1047997259125 321.58518973699455 178.3842412627181 348.708597078244 349.72381801130354 1.4273419741109659 1.1071424086707309 0.6869968872609444 1.000550018882687 0.405005769266454 1.1592612645774294 1.086871354337173 0.919540429261242 0.5100717539831745 0.9970970780919853 1.0 8.450072244193668 -8.544609255850578 24.906635018655372 0.7658113543394443 0.9637456686356461 0.03201821227658286 0.2784282699448188 441.1986602048142 505681.8351483562 0.05018313747277666 0.05690445759871622 2.8535845446685416e-09 8.544609255850578 0.1979343142962019 QYHESEEES(ph)EEEEAA ddPTM_A549_MK2206_60min_R1 2 QYHESEEESEEEEAA 15 0 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 1 QYHESEEES(1)EEEEAA;QYHESEEES(1)EEEEAA 82.90799999999999 0.00025684 3676400.0 441.3 562.43 373.06 405.65999999999997 574.8 394.69 453.43 561.25 600.46 888.8 804.1600000000001 True False 515.7806512508703 591.0552846672379 425.96551766117864 505.0467182107693 490.2476814329558 436.4558338259818 535.8123617070127 640.8089062560384 464.456768737585 688.0194627015917 604.4648783130698 0.8532847312656148 0.9778157604735362 0.7046985407158078 0.8355269864814066 0.8110441135986769 0.722053256500254 0.886424308393812 1.0601259547856559 0.7683767666266781 1.1382290144329057 1.0 9.239514705666677 -7.976215856930838 24.862094049699593 0.9037550107532772 0.8187846957510757 0.21173026082005564 0.11916919694260865 377.52714440294966 394636.39062863484 0.017596268315138 0.024312110621316833 1.0562923708307794e-08 7.976215856930838 -0.08497031500220154 QYHESEEES(ph)EEEEAA ddPTM_A549_PD325901_60min_R1 1 QYHESEEESEEEEAA 15 0 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 1 QYHESEEES(1)EEEEAA 105.14 5.2946e-06 1997800.0 433.69 330.51 291.97 351.52 537.46 403.24 318.9 267.9 290.28 386.81 349.26 True False 477.71788953429626 358.3632376249459 311.7848399582385 373.2325920401569 499.7106637363432 399.95614713379615 331.03591400877576 262.5565243365158 278.08054107589186 362.3867505865924 306.3032341415547 1.5596240466515092 1.1699623042809018 1.0178960102463381 1.2185068599950581 1.6314247060982952 1.3057522825533106 1.0807457353055276 0.8571784267063213 0.9078602837976565 1.1830980224620133 1.0 8.258816789670622 -7.905508485135399 3.6140165236247066 0.9483024413425639 1.3064536338411763 0.4309811611183344 0.1779127068654904 0.14892510106296775 3.818525755493654 0.026803105314245023 0.03760960460580312 1.243058349048732e-08 7.905508485135399 0.3581511924986124 QYHSDIAS(ph)VSGRW ddPTM_A549_MK2206_60min_R1 1 QYHSDIASVSGRW 13 1 Q9H694 Q9H694 BICC1 Protein bicaudal C homolog 1 1 QYHSDIAS(0.563)VS(0.437)GRW 52.254 0.01023 1803900.0 336.16 336.99 366.26 255.48 594.49 345.25 314.48 409.68 734.96 527.57 551.19 True False 392.89558967707353 354.14135159933267 418.2011754103449 318.072611468933 507.0413085161412 381.7841258415977 371.6169453049455 467.753394592381 568.4927334899498 408.3915705867223 414.31431092989027 0.9483032067978913 0.8547649508038838 1.009381439110155 0.7677084838200456 1.223808338597172 0.9214842832358806 0.8969445068669859 1.1289819884390468 1.3721291263485935 0.9857047169578215 1.0 8.694581843427603 -8.364689874171091 5.193911405837604 1.17894851038581 0.9482910328049134 0.2246201902740559 0.14515834439606928 0.21447637833802652 8.81596131635684 0.02699552705489273 0.03272611709691854 4.3182733081219736e-09 8.364689874171091 -0.2306574775808965 QYLEEVGYTDT(ph)ILDMR ddPTM_A549_PD325901_60min_R1 2 QYLEEVGYTDTILDMR 16 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16;M0R2A7;M0QYS2;M0R0P4;Q9NRL3-2 F5GYK2 STRN4 Striatin-4 1 QYLEEVGY(0.001)T(0.104)DT(0.895)ILDMR;QYLEEVGY(0.002)T(0.034)DT(0.963)ILDMR 94.20299999999999 3.2973e-06 6151200.0 2127.13 2575.0 2993.4 2234.7 3212.3 2549.3 2804.7 2853.2 2839.3999999999996 2626.5 2915.1 True False 2343.074671689657 2792.004286963287 3196.5501247764882 2372.732343628067 2986.6791298333897 2528.5393460177215 2911.43439329073 2796.2906877079013 2720.0698922794795 2460.662341758705 2556.561180341426 0.9164946607601786 1.0920936719341165 1.250331949556393 0.9280952718335461 1.168240820051301 0.989039247509828 1.138808809144912 1.0937702994201217 1.063956502662775 0.9624891282398673 1.0 11.319988835826411 -10.207669710041433 0.7960463013012726 1.0026406648746835 1.075877012910552 0.10513787062386815 0.09553147156187067 1.1776760675883948 1.4456078237967698 0.04620810317731386 0.01744392130692909 6.19912352043702e-11 10.207669710041433 0.07323634803586843 QYPDS(ph)PHPVPHR ddPTM_A549_MK2206_60min_R1 4 QYPDSPHPVPHR 12 0 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 QY(0.002)PDS(0.998)PHPVPHR;QYPDS(1)PHPVPHR;QYPDS(1)PHPVPHR;QY(0.002)PDS(0.998)PHPVPHR 124.2 2.0469e-06 53345000.0 4670.27 5563.860000000001 5265.08 4379.17 5801.209999999999 4217.84 4604.27 4645.33 7208.23 7141.57 8259.33 True False 5458.4973988611 5847.036708832493 6011.7475144146165 5452.06684658841 4947.859693816419 4664.169029224402 5440.806260363776 5303.8197532264785 5575.577414177994 5528.2843769642295 6208.310415088392 0.8792243032170265 0.9418080472622832 0.9683387447579848 0.8781885057386882 0.796973630988452 0.7512783216974493 0.8763747133424081 0.854309691141783 0.8980828987911699 0.8904652002465182 1.0 12.599984978642123 -10.034885227214112 0.7937964919598794 0.9927369256875309 0.869661961736095 0.09923937285031403 0.06419467089771995 0.47922189820804045 0.6064291775914048 0.029771471534402065 0.013086773284667034 9.228152711131768e-11 10.034885227214112 -0.12307496395143591 QYPDS(ph)PHPVPHR ddPTM_A549_PD325901_60min_R1 2 QYPDSPHPVPHR 12 0 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 QYPDS(1)PHPVPHR;QYPDS(1)PHPVPHR 85.493 0.00012035 55749000.0 8205.0 7593.200000000001 7886.099999999999 7640.3 8941.7 7340.6 8178.7 8787.8 8668.0 10329.0 9668.400000000001 True False 9037.965559798247 8233.105612337718 8421.298168971694 8112.223978619738 8313.665839190377 7280.820587368171 8489.944904056367 8612.520435104267 8303.71410378197 9676.825177241837 8479.248093037304 1.065892336281531 0.9709711901339808 0.9931656765517693 0.9567150164271114 0.980472059311144 0.8586634696237728 1.00126152825129 1.0157174717150215 0.9792984015411138 1.1412362359332213 1.0 13.049720622499903 -9.98835466355602 0.6372708123701832 0.9987728247986757 0.9762564952423818 0.05593047184744082 0.06416062889630006 2.595168770283689 2.1005014868072585 0.02783664007468323 0.010756177826653642 1.027177118496853e-10 9.98835466355602 -0.0225163295562939 QYQDS(ph)PNQK ddPTM_A549_PD325901_60min_R1 1 QYQDSPNQK 9 0 H0Y9T5;Q8IU60 H0Y9T5 DCP2 m7GpppN-mRNA hydrolase 1 QYQDS(1)PNQK 118.4 0.00016611 3486100.0 2245.6 2234.3 2077.5 1847.1 2647.1 2405.8 2219.4 2589.7 2221.9 2315.5 2174.5 True False 2473.5716588766527 2422.592302276533 2218.4916430223666 1961.1911719315365 2461.176827999243 2386.2079624404487 2303.8604815022813 2538.0464019196506 2128.5212698653845 2169.298934834298 1907.0502852912198 1.2970668251146409 1.2703347787741142 1.1633105115964928 1.0283898579171702 1.2905673473751136 1.2512559216948274 1.208075371305936 1.3308754475407414 1.1161327450473308 1.1375153301230498 1.0 10.897127169940344 -9.305069623898474 1.3971188059879043 1.0320007203576331 1.223204560026 0.31127707691906525 0.08779047633513766 0.22451019775266245 0.9075657834540507 0.01954034603131749 0.016750721478570745 4.953707690982699e-10 9.305069623898474 0.19120383966836685 QYS(ph)IEHVDLGAR ddPTM_A549_MK2206_60min_R1 2 QYSIEHVDLGAR 12 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QY(0.001)S(0.999)IEHVDLGAR;QY(0.003)S(0.997)IEHVDLGAR 71.08 0.00082942 4607200.0 596.88 691.5899999999999 703.8299999999999 414.9 936.31 547.63 616.05 775.6700000000001 1004.79 908.58 863.8700000000001 True False 697.6187516850655 726.7889769802731 803.6436774123925 516.5505186255685 798.5800393223566 605.5798431126266 727.978310719637 885.623597889748 777.2066693199175 703.3311469637845 649.3472374009046 1.0743385226021347 1.1192609055970406 1.2376177661571013 0.7954919785185012 1.2298197225243852 0.9325978586380645 1.1210924891795386 1.3638675070591963 1.196904559771112 1.0831356575550508 1.0 9.342846353221411 QYS(ph)IEHVDLGAR ddPTM_A549_PD325901_60min_R1 2 QYSIEHVDLGAR 12 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QY(0.001)S(0.999)IEHVDLGAR;QY(0.001)S(0.999)IEHVDLGAR 81.632 0.00022067 5403300.0 857.4100000000001 1001.75 1001.78 947.07 1247.26 949.31 928.47 939.01 1089.9 1175.03 1235.6 True False 944.4536320081193 1086.1709881419313 1069.7668149925137 1005.5683629479721 1159.6567604134095 941.5791341027276 963.8034339282791 920.2807089109061 1044.095293229346 1100.8384052681254 1083.629033113741 0.8715654556562501 1.002345779736896 0.9872075980823484 0.9279636593517006 1.0701602900775071 0.8689127970271877 0.8894219372831398 0.8492580770621626 0.9635172751224678 1.0158812394541834 1.0 10.08165523721655 -9.349492127414418 2.2161802880508157 0.9882255589788972 0.9376668899266682 0.14644268363040314 0.06389682982365423 0.4708474650301664 4.713608083253065 0.01334747189188166 0.011807662567231196 4.472062583564791e-10 9.349492127414418 -0.050558669052228944 QYSS(ph)LPR ddPTM_A549_MK2206_60min_R1 2 QYSSLPR 7 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QYS(0.005)S(0.995)LPR;QYS(0.013)S(0.987)LPR 111.82 0.0080023 216990000.0 8168.299999999999 8730.5 7728.400000000001 6680.6 10471.3 8155.299999999999 8470.5 7502.799999999999 11946.2 12123.3 11971.4 True False 9546.909344238584 9174.845159019476 8824.403331079851 8317.347299903533 8930.985641247233 9018.288432949987 10009.480206072058 8566.344876361338 9240.40477416137 9384.638110002476 8998.57098616827 1.0609361596316977 1.0195891295542545 0.9806449651443399 0.924296459147586 0.9924893246911178 1.0021911753335084 1.1123410840963148 0.9519672500810064 1.0268746880326691 1.0429031592269074 1.0 13.135480197786853 -7.52950294660183 24.99685782769711 1.0161558391580856 0.9926539475324138 0.07151612747769298 0.04735557354091809 439.87765975249886 1659894.1738682382 0.007058835399332163 0.010482420746614434 2.9545888421126795e-08 7.52950294660183 -0.023501891625671845 QYSS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 QYSSLPR 7 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 QYS(0.001)S(0.999)LPR;QYSS(1)LPR 118.5 0.0068736000000000005 243130000.0 13003.2 15238.9 16378.099999999999 13084.400000000001 17798.1 12842.4 15381.3 17684.800000000003 16390.9 17212.5 15470.099999999999 True False 14323.275291550097 16523.135583924202 17489.616355516057 13892.593671171555 16548.02285611171 12737.815752284145 15966.64378847032 17332.062790542794 15702.04747389016 16125.69981249637 13567.375773043776 1.0557144971253891 1.217857886471535 1.2890935320200352 1.0239705823416445 1.2196922332607614 0.9388562656009105 1.1768409790929142 1.2774808541073104 1.1573385845984776 1.1885643975849463 1.0 13.72785407854233 -10.552853423609355 0.914169699713777 1.0023190797848918 1.1521358310176069 0.0 0.11600389719068897 0.6476694525981789 0.9914952204213617 0.06123822487928549 0.0183010314380908 2.799926148171905e-11 10.552853423609355 0.1498167512327151 QYT(ph)LKK ddPTM_A549_PD325901_60min_R1 3 QYTLKK 6 1 P14923;C9JTX4;C9J826;C9JK18;C9JKY1;C9JPI2;K7ERP3 P14923 JUP Junction plakoglobin 1 QYT(1)LKK;QYT(1)LKK;QYT(1)LKK 69.825 0.031867 249908000.0 18425.800000000003 23903.6 28202.5 20214.399999999998 27632.300000000003 20397.6 27715.9 29264.5 26395.4 29320.8 27767.399999999998 True False 20296.373651642978 25918.04026169149 30116.491245409547 21462.99757776667 25691.502574259954 20231.488708402725 28770.643741222433 28680.79658994388 25286.093130476056 27469.47968408097 24352.185832051222 0.8334518220097445 1.0643003646752467 1.2367058732679188 0.8813581551072949 1.0549978039526122 0.830787381795312 1.1814398896117095 1.1777503993992826 1.038350039904659 1.1280087904029916 1.0 14.571763652782282 -7.78700321923418 24.999832526529893 1.0442186258609711 0.9973709646825047 0.1032510155731563 0.12750441576049723 766.4704221036495 749556.776570377 0.019541472138340937 0.027005657013676652 1.633039842842619e-08 7.78700321923418 -0.04684766117846639 RAAELS(ph)PEER ddPTM_A549_MK2206_60min_R1 2 RAAELSPEER 10 1 Q5U5Q3 Q5U5Q3 MEX3C RNA-binding E3 ubiquitin-protein ligase MEX3C 1 RAAELS(1)PEER;RAAELS(1)PEER 59.306000000000004 0.020684 4972400.0 715.5799999999999 990.11 631.38 678.45 1103.4299999999998 802.27 507.3 761.1800000000001 1148.13 933.78 1118.6599999999999 True False 836.3524097486917 1040.502369898261 720.9191779899073 844.6702804567777 941.1169087048826 887.1656788962746 599.4698434024378 869.0795960159846 888.0803881868621 722.8384494616246 840.8658485546385 0.9946323913455339 1.2374178017656168 0.85735338071952 1.0045244219499205 1.1192236078115971 1.055062089180124 0.7129197177324593 1.0335532088856298 1.0561499075189942 0.8596358749782848 1.0 9.715731841547948 RAAELS(ph)PEER ddPTM_A549_PD325901_60min_R1 2 RAAELSPEER 10 1 Q5U5Q3 Q5U5Q3 MEX3C RNA-binding E3 ubiquitin-protein ligase MEX3C 1 RAAELS(1)PEER;RAAELS(1)PEER 75.911 0.00063178 5085100.0 711.74 869.8900000000001 684.19 745.5799999999999 932.12 794.1700000000001 1239.47 1033.05 835.6800000000001 1228.9299999999998 934.51 True False 783.9953208447049 943.1986831792207 730.6232477686996 791.6327832649638 866.6511068394302 787.7025428262245 1286.6387091140093 1012.4450073379533 800.559275755482 1151.3351500694935 819.5711943469751 0.9565920889513246 1.15084411175621 0.8914701404932268 0.965910940654433 1.057444567131191 0.9611154567893969 1.5698925462347275 1.235335031686488 0.9768026027236821 1.4048018744568789 1.0 9.678725468288013 -5.0090843193156065 16.16098494371593 1.0434410624899189 0.8947404104727299 0.0 0.2128804634451885 20224227.347270567 744893287.441056 0.02569507516094541 47550796.7006095 9.7929983353789e-06 5.0090843193156065 -0.14870065201718896 RAAPT(ph)TPPPPVK ddPTM_A549_MK2206_60min_R1 1 RAAPTTPPPPVK 12 1 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 RAAPT(0.5)T(0.5)PPPPVK 95.631 0.00015969 53939000.0 1782.0 2676.1 2341.8 2101.0 3016.1 2305.5 2084.2 1806.3 2981.3 3893.6 4075.4 True False 2082.7580342829174 2812.3020594527266 2673.902453382695 2615.745094317474 2572.4356854035095 2549.4664797329588 2462.872161678222 2062.3485565617493 2306.0403101578145 3014.0330557773573 3063.3657046820067 0.6798920648291055 0.918043201683182 0.8728642647190111 0.8538794732602786 0.8397416219264431 0.8322435926720694 0.803975887669566 0.6732296289044706 0.7527799591910602 0.9838959322325604 1.0 11.580901890853752 -10.823253183816977 1.1065729825314619 0.9984098832156612 0.8051322371448891 0.5004147138274087 0.07258430945901867 0.34511144695385637 0.7599547497010533 0.05028932848596033 0.012865253253407245 1.5022659238522037e-11 10.823253183816977 -0.19327764607077202 RAAPT(ph)TPPPPVKR ddPTM_A549_MK2206_60min_R1 1 RAAPTTPPPPVKR 13 2 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 RAAPT(0.885)T(0.115)PPPPVKR 55.173 0.0063304 8587700.0 916.08 926.43 1180.2 1080.2 1359.7 1088.0 1146.2 1406.2 1590.3 1522.9 1713.7 True False 1070.691907994329 973.581329897533 1347.5701065343992 1344.8490484920214 1159.6899311836985 1203.1314378440504 1354.4497033468856 1605.5331563068887 1230.0995891872578 1178.8758323000159 1288.1409942860967 0.8311915487075384 0.75580338970355 1.0461355647494464 1.0440231732841894 0.9002818296504977 0.9340060157862148 1.051476281986925 1.2463955137121419 0.9549417297048247 0.9151760851717659 1.0 10.331074797854258 -5.760111854759153 24.999580567108584 1.0005348218682992 0.7934974175352413 0.4479898355495059 0.0922924086768729 23.04665556026481 433956.9655728008 0.012513531518785415 0.04371116361843429 1.7373533069146362e-06 5.760111854759153 -0.20703740433305795 RAAPT(ph)TPPPPVKR ddPTM_A549_PD325901_60min_R1 1 RAAPTTPPPPVKR 13 2 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 RAAPT(0.5)T(0.5)PPPPVKR 46.318000000000005 0.013222 14611000.0 1356.1 1224.1 1277.6 1758.1 1597.8 1550.2 1495.5 1694.2 1719.0 2123.7 1777.9 True False 1493.770273691945 1327.2592029793236 1364.3056188329133 1866.6938440652 1485.5760401107595 1537.5756851671722 1552.4120708690004 1660.4078519258112 1646.7564079835267 1989.6092195670901 1559.2295710366795 0.9580181786180384 0.851227572663898 0.8749870090815633 1.1971898678294677 0.9527628693721155 0.9861124453565164 0.9956276482345403 1.0648899192066128 1.0561346696937344 1.2760207069727811 1.0 10.606617641570773 RAAPTRGS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 RAAPTRGSPTK 11 2 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 RAAPT(0.159)RGS(0.836)PT(0.005)K;RAAPT(0.036)RGS(0.767)PT(0.197)K 57.136 0.0028407 15322800.0 1282.4 1430.27 1399.72 1301.21 2164.59 1662.6 1448.8600000000001 1328.15 2348.78 2299.6 2680.7 True False 1498.8377683301976 1503.0646338228958 1598.2213434319006 1620.0065084135365 1846.1816784150346 1838.5352284554397 1712.0991076523883 1516.419329788787 1816.7850802309301 1780.118762858437 2015.0082064437993 0.7438370541306288 0.7459347455837857 0.7931587267590002 0.8039701789962512 0.9162154637937087 0.9124207150005562 0.8496735160567896 0.7525623592695188 0.9016266407357693 0.8834300312851289 1.0 10.976569999034021 -6.679215386251443 0.03687045138133643 1.632621979563172 3.1235143706345947e-13 0.3967839859193215 0.06253187734388305 92.48583225454449 0.8473032528635602 15.805801190112371 21.898452490162754 2.0930741483822574e-07 6.679215386251443 -1.6326219795628596 RAAPTRGS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 RAAPTRGSPTK 11 2 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 RAAPT(0.071)RGS(0.928)PT(0.001)K 49.928999999999995 0.0090146 10057000.0 1627.8 1762.3 1828.7 1965.2 2222.9 2271.1 1783.4 2369.0 2173.7 1997.6 1704.0 True False 1793.0530576769763 1910.8152057923883 1952.8065788664273 2086.5859407069747 2066.771172588688 2252.6049145808047 1851.268262913925 2321.7484365554515 2082.3469482453697 1871.471195087452 1494.4188025459807 1.1998330418636494 1.278634344359834 1.3067331430382902 1.3962524676162684 1.3829932874690907 1.5073451369476434 1.2387881226868895 1.5536129715445113 1.3934159184144095 1.252307045320296 1.0 10.545368796702112 -10.62744178418302 0.9031169377377819 0.9997381070939539 1.3648799378335748 0.28061223844879224 0.12390248626802335 0.2934531179523636 0.42660926145705436 0.06933862011127843 0.018745927424531773 2.3580782677931258e-11 10.62744178418302 0.3651418307396208 RAAPTT(ph)PPPPVK ddPTM_A549_MK2206_60min_R1 1 RAAPTTPPPPVK 12 1 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 RAAPT(0.376)T(0.624)PPPPVK 84.75299999999999 0.00028034 37349000.0 3159.8 4085.7 3873.9 3280.6 3522.7 3384.2 3218.5 2512.3 4442.9 7300.9 7219.8 True False 3693.0969903070486 4293.644678564328 4423.277271397737 4084.3471472717297 3004.5154964924727 3742.3137977498477 3803.2597890611987 2868.426218596072 3436.590243853402 5651.621619304737 5426.924403656861 0.680513807750575 0.7911745878883283 0.8150615233219706 0.7526080784393361 0.5536313523121715 0.6895828132833653 0.7008131136852437 0.5285546665553736 0.6332482246367209 1.041404154348726 1.0 12.405919096930205 -10.71915811827126 0.982795642321611 0.99941862414811 0.6834837016957962 0.6888972970196373 0.0865907610308625 0.2857077404854059 0.49197975064066773 0.06241617618589121 0.0163261469821607 1.9091580442777558e-11 10.71915811827126 -0.3159349224523138 RAAPTT(ph)PPPPVK ddPTM_A549_PD325901_60min_R1 2 RAAPTTPPPPVK 12 1 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 RAAPT(0.026)T(0.974)PPPPVK;RAAPT(0.158)T(0.842)PPPPVK 110.44 5.0811000000000005e-05 158566000.0 9801.6 9970.8 10311.2 10806.9 13832.599999999999 14509.099999999999 12499.8 12557.400000000001 13833.0 12402.599999999999 13008.8 True False 10796.651216443453 10811.074308525638 11010.980038282662 11474.417668749345 12861.045895879386 14390.942700076774 12975.48672915301 12306.932805910268 13251.647115553294 11619.497719359033 11408.800069577563 0.9463441510587559 0.9476083586874481 0.9651304231059568 1.005751489970164 1.1272917237084685 1.2613896827284512 1.1373226500614326 1.078722804401459 1.161528559948195 1.018467993872845 1.0 13.477859442455324 -6.578163661395503 3.719687578141557 1.0998113690042677 0.9554827852360337 0.5256314996245979 0.06714044157700765 0.18304020891169387 5.204238008132349 0.011840605463152278 0.02637195049794382 2.641413168273811e-07 6.578163661395503 -0.144328583768234 RAAPTT(ph)PPPPVKR ddPTM_A549_MK2206_60min_R1 1 RAAPTTPPPPVKR 13 2 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 RAAPT(0.148)T(0.852)PPPPVKR 63.037 0.0023225000000000003 8504400.0 959.9 843.75 1113.4 1099.3 1204.1 839.56 940.86 1115.5 1247.5 1480.7 1550.7 True False 1121.9076526981878 886.6932710523658 1271.2968620703275 1368.6285493494527 1026.978485061625 928.4016819451758 1111.802083310897 1273.6255410754757 964.9432418481452 1146.2088416091885 1165.6183928572384 0.9624999567380675 0.7607063139067723 1.0906630076023793 1.1741651965482311 0.8810589223324021 0.7964885314390229 0.9538302502121441 1.092660813247364 0.8278380366689433 0.9833482798770257 1.0 10.186879832340644 RAAPTT(ph)PPPPVKR ddPTM_A549_PD325901_60min_R1 1 RAAPTTPPPPVKR 13 2 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 RAAPT(0.216)T(0.784)PPPPVKR 50.806000000000004 0.009499200000000001 18479000.0 1370.5 1721.1 1248.4 1306.4 2046.1 1783.5 1467.9 1602.1 1730.7 1709.9 1951.9 True False 1509.6321510912237 1866.1431372009743 1333.1239312390478 1387.093360950333 1902.3889946618015 1768.975767317541 1523.7617377657007 1570.1448586768634 1657.9646976713727 1601.9366221866403 1711.8286741135562 0.8818827338973997 1.09014597396397 0.7787718195159835 0.8102991741674251 1.1113197386104798 1.033383652270913 0.8901368231577012 0.91723247917315 0.9685342480490484 0.9358042930412871 1.0 10.741322603588523 -7.342057915017772 0.009864821931738463 1.8972076830484201 2.5199393042415184e-08 0.00305405389418667 0.10151233788417169 5094.307121426208 17.800647897161365 1661.9845357558881 1760.829380355583 4.549273896009611e-08 7.342057915017772 -1.8972076578490271 RAAS(ph)AATAAPTATPAAQESGTIPK ddPTM_A549_MK2206_60min_R1 1 RAASAATAAPTATPAAQESGTIPK 24 1 B8ZZ81;O00116 B8ZZ81 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal 1 RAAS(0.92)AAT(0.079)AAPTATPAAQESGTIPK 143.77 4.6210000000000005e-28 27813000.0 8811.6 8926.4 8529.5 8451.6 13699.0 10815.0 8780.2 9681.2 14783.0 12206.0 12362.0 True False 10298.782657063612 9380.715632262925 9739.11135713028 10522.242379406747 11683.895246955564 11959.436121584022 10375.448687250317 11053.539747431552 11434.674103600095 9448.656122564833 9292.174226156685 1.10832862217256 1.0095285994376864 1.0480982297679593 1.1323767853800593 1.2573908928726698 1.2870438963487383 1.1165792240576276 1.1895536478768094 1.230570351491307 1.0168401810598497 1.0 13.181800489266815 -6.28282652505621 6.239487372748879 1.1420791468509428 1.0505109064723852 0.18887838644362176 0.08842251381964245 0.2815481550414333 43.94000287576574 0.01522149810793455 0.03692334177900104 5.214029391322626e-07 6.28282652505621 -0.0915682403785576 RAAS(ph)AATAAPTATPAAQESGTIPK ddPTM_A549_PD325901_60min_R1 2 RAASAATAAPTATPAAQESGTIPK 24 1 B8ZZ81;O00116 B8ZZ81 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal 1 RAAS(0.993)AAT(0.006)AAPTATPAAQESGTIPK;RAAS(0.983)AAT(0.017)AAPTATPAAQESGTIPK 180.86 6.1218e-44 48094000.0 10850.599999999999 11235.7 12761.5 12547.8 13563.099999999999 12375.0 11799.0 12530.2 12991.2 15588.3 14998.7 True False 11952.144924210455 12182.571870692575 13627.572131133544 13322.849107878576 12610.47464615486 12274.22210291818 12248.017401660545 12280.275331248264 12445.225042114942 14604.052077684075 13153.954984592965 0.908635078819247 0.9261527719200684 1.036005684001148 1.0128397978770214 0.9586831231310525 0.9331202757873808 0.9311281219987805 0.9335804589290423 0.9461203916762565 1.1102403873807982 1.0 13.683209017758236 -10.756840076403751 1.0587065785497014 0.9994604543337885 0.9553210749356182 0.26898871922273293 0.04977382949849474 0.7963280307801515 1.6147268709709925 0.02532973245671297 0.006783578611196809 1.7504911667782164e-11 10.756840076403751 -0.04413937939817025 RAAS(ph)LNYLNQPSAAPLQVSR ddPTM_A549_PD325901_60min_R1 2 RAASLNYLNQPSAAPLQVSR 20 1 Q9NSK0;Q9NSK0-3;Q9NSK0-5 Q9NSK0 KLC4 Kinesin light chain 4 1 RAAS(1)LNYLNQPSAAPLQVSR;RAAS(0.994)LNY(0.006)LNQPSAAPLQVSR 126.68 6.5834e-16 24247000.0 3188.1 4100.0 3818.8999999999996 4312.299999999999 4031.0 4186.1 3520.4 4002.1 3786.0 4516.8 4989.5 True False 3511.7535650448244 4445.521388951253 4078.073518911248 4578.660977056121 3747.876466195062 4152.009789497034 3654.370748436799 3922.2749759132876 3626.887586169651 4231.60847715809 4375.823131046463 0.8025355367151233 1.0159280336104723 0.931955747931702 1.0463542149522735 0.8564963331364746 0.9488522879360747 0.8351276180495142 0.8963513511514551 0.828846934062962 0.9670428512374803 1.0 12.095338710836666 RAASAATAAPTAT(ph)PAAQESGTIPK ddPTM_A549_PD325901_60min_R1 1 RAASAATAAPTATPAAQESGTIPK 24 1 B8ZZ81;O00116 B8ZZ81 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal 1 RAASAATAAPT(0.005)AT(0.995)PAAQESGTIPK 164.41 3.3514999999999992e-34 4924500.0 2181.6 2271.4 2159.4 2891.7 2665.6 2425.5 3017.6 2501.8 3115.7 3453.8 3454.8 True False 2403.074425990962 2462.8188494789924 2305.949869527076 3070.3137414728058 2478.377451820778 2405.747532171962 3132.4364192940798 2451.8996363758683 2984.7579641386105 3235.726478570804 3029.881501781605 0.7931248877482261 0.8128432904160862 0.7610693250449402 1.01334449537628 0.8179783434974152 0.7940071355125127 1.0338478311617703 0.8092394487817834 0.9851071609181873 1.0679382928567205 1.0 11.565045655873503 -7.287344042669706 0.276129493185187 1.020457836793814 0.7457365636539859 0.4390888153866266 0.08470777167845017 1.9363528662465839 0.2796811089146284 0.055371481087960354 0.17727849404439905 5.1600743266648176e-08 7.287344042669706 -0.2747212731398281 RAASDGQYENQS(ph)PEATSPR ddPTM_A549_PD325901_60min_R1 2 RAASDGQYENQSPEATSPR 19 1 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 RAAS(0.001)DGQY(0.003)ENQS(0.704)PEAT(0.242)S(0.05)PR;RAAS(0.001)DGQY(0.005)ENQS(0.966)PEAT(0.022)S(0.006)PR 52.321000000000005 0.005576 4026900.0 683.3299999999999 828.3800000000001 919.4100000000001 891.48 640.55 720.58 971.0899999999999 787.56 845.74 629.28 764.3499999999999 True False 752.7011585590411 898.1904897998631 981.8066914614659 946.5446949020221 595.5599777775358 714.7118353875376 1008.0453613508377 771.8514979711323 810.1964889400734 589.5471534064034 670.339795613862 1.1228650954099435 1.3399032784221732 1.464640318067912 1.4120371505547067 0.8884449076041402 1.066193354570337 1.5037826605948743 1.151433203013572 1.2086355222251695 0.8794750919815629 1.0 9.38874877367241 -14.999999804477653 0.15989140310597746 0.03530336780882701 1.3143800023125483 0.29350267403613717 0.17749872548405823 65.82006502421385 0.6789052438075435 19.793808295319767 0.28484733398023937 1.0000004502069423e-15 14.999999804477653 1.2790766345037212 RAASSDQLRDNS(ph)PPPAFKPEPPK ddPTM_A549_MK2206_60min_R1 2 RAASSDQLRDNSPPPAFKPEPPK 23 3 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 RAAS(0.043)S(0.215)DQLRDNS(0.742)PPPAFKPEPPK;RAAS(0.03)S(0.182)DQLRDNS(0.788)PPPAFKPEPPK 71.528 4.2936000000000004e-05 17668700.0 2162.9300000000003 2465.2 2897.6 1806.64 2829.3 2590.1000000000004 2319.3999999999996 2049.3900000000003 3102.2 3344.8 3368.7 True False 2527.9797054385813 2590.6681502794568 3308.52325088466 2249.2668811031526 2413.1137179510465 2864.182662830768 2740.8049572001096 2339.8973084936524 2399.556653195443 2589.207356935512 2532.1588186097742 0.998349584891564 1.0231065015510385 1.3066017923398388 0.8882803339871324 0.9529867164003217 1.131122835495478 1.0823985198151544 0.9240720966224074 0.9476327612471268 1.0225296051363235 1.0 11.306152179015657 -8.25298351447357 24.69554395917619 0.9707401495280963 1.0557937330776808 0.12358970357292043 0.10380726334295405 838.4455423851509 2448698.9027377013 0.016273275559688327 0.020827376209688338 5.584913942921583e-09 8.25298351447357 0.08505358354958448 RAASSDQLRDNS(ph)PPPAFKPEPPK ddPTM_A549_PD325901_60min_R1 4 RAASSDQLRDNSPPPAFKPEPPK 23 3 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 RAAS(0.008)S(0.07)DQLRDNS(0.922)PPPAFKPEPPK;RAAS(0.003)S(0.018)DQLRDNS(0.979)PPPAFKPEPPK;RAAS(0.001)S(0.008)DQLRDNS(0.991)PPPAFKPEPPK;RAASS(0.003)DQLRDNS(0.997)PPPAFKPEPPK 97.691 4.5844e-08 39489900.0 6451.799999999999 5462.2 7009.5 6667.200000000001 7066.4 7765.3 6579.0 7071.4 7268.8 6789.9 6643.3 True False 7106.7819864358735 5922.518763592564 7485.206821547665 7079.01780169018 6570.0804417565805 7702.061971377011 6829.367445166935 6930.355379594015 6963.317613932902 6361.184555228419 5826.21621534843 1.219793726108886 1.0165291751429406 1.284745801542489 1.215028337438182 1.1276753554817507 1.3219663820726226 1.1721788537774878 1.189512219154667 1.1951697905733265 1.0918208868511752 1.0 12.508343526652336 -10.59795066244328 0.7195458497101482 0.9891702916867873 1.1943372199884137 0.3176516237287186 0.07955476805972167 0.5288501420246883 0.45046338876592384 0.06338959981033493 0.01424526096020685 2.523767466079457e-11 10.59795066244328 0.20516692830162642 RAAT(ph)SPAPGPSDATAR ddPTM_A549_MK2206_60min_R1 1 RAATSPAPGPSDATAR 16 1 Q8IXZ2;Q8IXZ2-2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 RAAT(0.5)S(0.5)PAPGPSDATAR 42.64 0.046755 3775400.0 1141.9 1136.6 852.74 603.57 1000.7 975.08 1014.0 655.55 1099.5 1315.2 1626.8 True False 1334.624803225399 1194.448085188882 973.6713545552811 751.4446770952866 853.4983556192747 1078.2623183942803 1198.230674571403 748.476220037676 850.46500554071 1018.0954065539295 1222.8206626040858 1.0914313472453256 0.9767974337669579 0.7962503287127787 0.6145174841051756 0.697975084753383 0.8817828741117623 0.9798907650281958 0.6120899351207734 0.6954944674631051 0.8325794923891955 1.0 10.255997120135516 -5.583257140762152 3.458931627938537 0.8177141961398725 1.0749234800492748 0.3509387111552178 0.12722430675070204 0.251901989408593 5.835150263857749 0.021540395278558867 0.11275372571516817 2.610615181519142e-06 5.583257140762152 0.25720928390940234 RAAVAASSS(ph)S ddPTM_A549_MK2206_60min_R1 1 RAAVAASSSS 10 1 P61927 P61927 RPL37 60S ribosomal protein L37 1 RAAVAASS(0.009)S(0.955)S(0.036) 114.51 7.649600000000001e-05 50158000.0 2364.8 2442.1 1875.6 1884.4 2457.9 2219.5 2068.2 1434.9 2138.5 3283.8 3449.9 True False 2763.920426190933 2566.3924589475355 2141.5882831858307 2346.0780845939303 2096.346165960442 2454.366016815139 2443.965168785576 1638.301469196951 1654.133164482772 2541.987299301852 2593.1946176037827 1.065836095535671 0.9896644245386359 0.825849424739569 0.9047057512257995 0.8084029450506691 0.9464642569261049 0.9424534326096586 0.6317695779851681 0.6378746713624056 0.9802531911973317 1.0 11.340514768260018 RAAVAASSSS ddPTM_A549_PD325901_60min_R1 2 RAAVAASSSS 10 1 P61927 P61927 RPL37 60S ribosomal protein L37 0 ; 131.06 0.00010684 7259400.0 1593.5 1799.22 1817.88 2015.66 1968.62 1868.08 1260.94 1859.6 1936.0 2359.6 2249.4 False True 1755.2709469273007 1950.8465837631384 1941.2522686004813 2140.162740304001 1830.3509225703112 1852.8669758399492 1308.925761712844 1822.5088191720217 1854.6366526213533 2210.6144533081447 1972.7380601214375 0.8897638173104695 0.9889029989328885 0.9840395477953023 1.084869189461604 0.927822583023333 0.9392361881667608 0.6635071265529643 0.923847344973834 0.9401332544408789 1.1205818440853035 1.0 10.945983692598158 -5.234905063463063 21.242766792641653 0.9528499232895153 0.8897632430561254 0.02829456507934358 0.11102524398609602 3372.0523814679786 2699248.1489966563 0.013826480535637169 1.0522364227565018 5.822304791259987e-06 5.234905063463063 -0.06308668023338992 RAAVAASSSS(ph) ddPTM_A549_MK2206_60min_R1 1 RAAVAASSSS 10 1 P61927 P61927 RPL37 60S ribosomal protein L37 1 RAAVAASSS(0.083)S(0.917) 114.5 7.6589e-05 60739000.0 1521.8 1694.6 2003.3 1542.9 2107.7 1297.4 1531.4 1470.1 1880.9 2753.6 2855.9 True False 1778.6426355621447 1780.84790177818 2287.39806339634 1920.910569263412 1797.6601220533064 1434.690006855581 1809.6355572373234 1678.491176992431 1454.8791531801003 2131.5598475417437 2146.701211169787 0.8285469008483586 0.8295741822439067 1.06554095721122 0.8948197165345911 0.8374058358469552 0.668323099363132 0.8429843649509152 0.7818932454404228 0.6777278298488979 0.9929466832415899 1.0 11.067905688173223 -5.573610878853278 24.99999389018437 0.8450409065690145 0.8287847553902532 0.0 0.12070237619759502 1215.1085178091826 598782.3040740612 0.01933932069065523 0.07490087725425118 2.6692491994680226e-06 5.573610878853278 -0.016256151178761336 RAAVAASSSS(ph) ddPTM_A549_PD325901_60min_R1 2 RAAVAASSSS 10 1 P61927 P61927 RPL37 60S ribosomal protein L37 1 RAAVAAS(0.021)S(0.278)S(0.278)S(0.423);RAAVAASSS(0.421)S(0.579) 115.78 6.892899999999999e-05 134973000.0 3844.9 3953.0 4054.7000000000003 4539.700000000001 4264.700000000001 4237.8 4128.5 4645.0 4076.7 5017.299999999999 5727.5 True False 4235.231417534219 4286.133183054709 4329.8763248918385 4820.106958593249 3965.1621844162955 4203.288761838114 4285.612326701883 4552.351831067992 3905.370476106131 4700.506821742227 5023.053809613912 0.8431586795722088 0.8532923089239521 0.862000784583402 0.9595969187843 0.7893927349189737 0.8367994692378564 0.8531886157578887 0.906291671085622 0.7774892772662354 0.9357866747805202 1.0 12.294349014668311 -10.991342890816227 1.2500009774888214 1.000482657050219 0.8479606039685479 0.41526194353236523 0.0504479411882242 0.2762587870949292 0.7640908614596074 0.03601317947426324 0.008131207582827904 1.0201337340902688e-11 10.991342890816227 -0.1525220530816711 RAAVGQES(ph)PGGLEAGNAK ddPTM_A549_MK2206_60min_R1 2 RAAVGQESPGGLEAGNAK 18 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 RAAVGQES(1)PGGLEAGNAK;RAAVGQES(1)PGGLEAGNAK 99.92299999999999 7.944e-08 15604400.0 5822.0 7237.9 5678.2 5480.4 8078.700000000001 6537.4 5845.6 5363.5 9045.0 8953.8 9367.6 True False 6804.61126576607 7606.278194429532 6483.454142453499 6823.098246024507 6890.33393178918 7229.183328825089 6907.669853327996 6123.792550029863 6996.321941896971 6931.130361315828 7041.366387392448 0.9663765370808871 1.0802275831078123 0.9207664799352169 0.9690020190173956 0.978550689270524 1.0266733658070863 0.9810127002759244 0.8696880993147156 0.993602882875669 0.9843445121284986 1.0 12.781639697762975 -8.971254133982855 24.999542771692976 0.9971778299126851 0.9748880340094924 0.02434379491470695 0.050546995320221076 531.3769564944324 462128.9792030235 0.008673106826497598 0.009103243378201242 1.0684294885916253e-09 8.971254133982855 -0.02228979590319269 RAAVPELSAQPAGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RAAVPELSAQPAGSPR 16 1 A6NIX2 A6NIX2 WTIP Wilms tumor protein 1-interacting protein 1 RAAVPELSAQPAGS(1)PR;RAAVPELSAQPAGS(1)PR 97.689 1.5504e-06 17662200.0 3241.0 3217.3 2978.9 3341.9 4060.8999999999996 3523.9 3173.9 4231.2 3688.3 4735.5 4168.9 True False 3570.023934101905 3488.4331621153337 3181.0660675809036 3548.3215729944236 3775.6763933444636 3495.2025267453205 3294.6845013247225 4146.805396687815 3533.2935774087505 4436.499721834516 3656.1517288344744 0.9764430469191645 0.9541270223015043 0.8700585488543111 0.9705071988698823 1.0326913851980897 0.9559785222205583 0.9011345112788899 1.1341994819262475 0.9663968673792186 1.2134342475028532 1.0 11.836110227567614 -6.5113202750644845 24.483523089743624 0.9900308605070075 0.9330482149724559 0.09508240015226299 0.08971104254929858 584.646941823296 1238416.2509441057 0.007978736951023267 0.01761476021325327 3.080915058834065e-07 6.5113202750644845 -0.05698264553455157 RADDFPVRDDPS(ph)DVT(ph)DEDEGPAEPPPPPK ddPTM_A549_PD325901_60min_R1 4 RADDFPVRDDPSDVTDEDEGPAEPPPPPK 29 2 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 2 RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPK;RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPK;RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPK;RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPK 96.95700000000001 4.5219e-10 179761000.0 10035.0 10605.5 9429.4 10959.7 11911.5 10552.6 10467.3 12214.0 10596.5 11229.5 12231.400000000001 True False 11053.745812623443 11499.262705005482 10069.335787588501 11636.655777715367 11074.877332444185 10466.663124303384 10865.638829426334 11970.382188302368 10151.165955321363 10520.467453561545 10727.015341232935 1.0304586561123492 1.0719908883512221 0.9386894180046133 1.0847990244766332 1.0324285908191184 0.9757292957409319 1.0129228386260019 1.1159098600605268 0.9463178370130507 0.9807450738997778 1.0 13.388961099503593 RADLNQGIGEPQS(ph)PSR ddPTM_A549_MK2206_60min_R1 4 RADLNQGIGEPQSPSR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.857)PS(0.143)R;RADLNQGIGEPQS(0.999)PS(0.001)R;RADLNQGIGEPQS(0.998)PS(0.002)R;RADLNQGIGEPQS(0.867)PS(0.133)R 222.09 8.004899999999998e-55 371318000.0 14831.7 17758.1 17097.1 14984.5 23216.399999999998 18346.100000000002 16151.0 18487.9 24678.4 23992.7 23915.199999999997 True False 17334.92835974968 18661.911439022253 19521.725867165966 18655.703172679758 19801.298314579115 20287.47212484443 19085.42763806975 21108.616441819173 19088.781803306818 18572.732406346175 17976.395814057785 0.9643161253822377 1.0381342084395129 1.085964398486359 1.0377888518726732 1.1015165953952923 1.1285617169699473 1.0616937808603817 1.1742407465968205 1.0618803680534856 1.0331733122955629 1.0 14.133816175573516 -3.2066215866397707 15.192512604011416 1.0517395014095945 1.0631208794450089 0.0 0.05705140112766545 0.0 0.0 0.008078579666833372 0.0 0.0006214102511561044 3.2066215866397707 0.011381378035414391 RADLNQGIGEPQS(ph)PSR ddPTM_A549_PD325901_60min_R1 4 RADLNQGIGEPQSPSR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.998)PS(0.002)R;RADLNQGIGEPQS(0.99)PS(0.01)R;RADLNQGIGEPQS(0.973)PS(0.027)R;RADLNQGIGEPQS(0.997)PS(0.003)R 242.09 1.5094999999999997e-65 458190000.0 21531.8 20987.199999999997 20070.0 20003.0 23566.399999999998 23362.0 21611.2 24451.6 22470.9 23345.6 24055.7 True False 23717.69248512662 22755.864998584802 21432.07089071426 21238.539879890915 21911.177363666422 23171.747617646415 22433.626042102394 23963.89365609088 21526.526217659684 21871.554831814978 21097.00140164634 1.1242210223902138 1.0786303022575052 1.0158823276677498 1.0067089381827283 1.0385920229382242 1.0983431804596728 1.063356143131874 1.1358909827925032 1.0203595197173294 1.0367139109213974 1.0 14.36475033723073 -8.97526858580492 24.756545925748277 1.008982085768073 1.066957451829867 0.242382467815472 0.039379411188467835 138.9898171889097 139132.4833435367 0.007075543784991391 0.007334284953473634 1.0585988410585875e-09 8.97526858580492 0.0579753660617941 RADLNQGIGEPQS(ph)PSRR ddPTM_A549_MK2206_60min_R1 4 RADLNQGIGEPQSPSRR 17 2 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.999)PS(0.001)RR;RADLNQGIGEPQS(0.941)PS(0.059)RR;RADLNQGIGEPQS(0.934)PS(0.066)RR;RADLNQGIGEPQS(0.895)PS(0.105)RR 148.52 5.179600000000001e-17 1001800000.0 9155.6 10969.6 11280.999999999998 10516.2 12781.599999999999 8372.09 9150.6 8988.199999999999 14410.1 14730.300000000001 16551.2 True False 10700.841447071087 11527.905785050121 12880.815431125697 13092.66947209015 10901.443571683132 9258.019006856437 10813.145572715068 10262.304875208058 11146.235358201158 11402.714999362352 12441.08025011847 0.8601215675760301 0.9266000663359074 1.0353454179353148 1.052374006828344 0.8762457401220705 0.7441491269834287 0.8691484465436271 0.8248724924919872 0.8959218278569514 0.9165373721670005 1.0 13.60282413863745 -5.265931078990023 7.035221364640203 0.9299570538967545 0.8592001559047879 0.0017533921558701149 0.08764200123428305 0.30721323457139577 118.64013871763763 0.013295597824404912 0.1045061633690828 5.420869108659908e-06 5.265931078990023 -0.0707568979919666 RADLNQGIGEPQS(ph)PSRR ddPTM_A549_PD325901_60min_R1 5 RADLNQGIGEPQSPSRR 17 2 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.999)PS(0.001)RR;RADLNQGIGEPQS(0.999)PS(0.001)RR;RADLNQGIGEPQS(0.826)PS(0.174)RR;RADLNQGIGEPQS(0.97)PS(0.03)RR;RADLNQGIGEPQS(0.924)PS(0.076)RR 176.67 6.8737999999999995e-31 696175000.0 14967.400000000001 14335.699999999999 15363.699999999999 15520.4 17841.0 18726.899999999998 16362.2 17115.8 18018.399999999998 17256.899999999998 18375.0 True False 16486.87942958249 15543.81975014353 16406.37307143333 16479.059858614164 16587.90970810868 18574.3943352839 16984.872474739404 16774.41194191464 17261.149308673856 16167.296388919025 16114.99148872208 1.0230771416243483 0.964556497657583 1.0180813984863206 1.022591905813098 1.029346476522657 1.1526158327966236 1.0539796118804097 1.0409196898213722 1.0711236999879215 1.0032457293094788 1.0 13.976115805974727 -6.354123572459123 2.0062830414764514 1.0449969331856728 0.9954145580266462 0.21207655749369747 0.040888809217435824 0.4634607699210299 3.58897125013955 0.006502306846805918 0.019666399710005958 4.424624579066931e-07 6.354123572459123 -0.049582375159026526 RADLNQGIGEPQSPS(ph)RR ddPTM_A549_PD325901_60min_R1 1 RADLNQGIGEPQSPSRR 17 2 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.407)PS(0.593)RR 103.84 4.5006999999999996e-09 253600000.0 3608.8 3106.0 3956.9 3660.6 4315.4 3481.4 3486.7 3888.5 3934.1 3727.1 4097.0 True False 3975.162719341856 3367.753520507949 4225.439028772661 3886.7069481742083 4012.301191321797 3453.048632654491 3619.3882764954506 3810.940817030761 3768.7634582012734 3491.7702699291344 3593.094973022818 1.1063338846280508 0.9372848604874775 1.1759886839890183 1.081715617693339 1.1166699520737429 0.9610234793625541 1.007317731279035 1.0606290247387122 1.0488905766469814 0.9718001600696793 1.0 11.811011353956575 -7.246150997995752 24.980809170697643 1.0215601617780552 1.08049822876856 0.26094665290474595 0.060818372841861174 1040.7834404531206 1700612.5956614064 0.008401955207028645 0.014524290452280668 5.673473125457311e-08 7.246150997995752 0.058938066990504856 RADNCS(ph)PVAEEETTGSAESTLPK ddPTM_A549_MK2206_60min_R1 1 RADNCSPVAEEETTGSAESTLPK 23 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 RADNCS(1)PVAEEETTGSAESTLPK 124.8 3.0822e-16 10798000.0 2177.7 2035.8 2013.0 1508.7 2472.5 2559.7 2000.7 2082.5 3278.6 2651.1 2434.5 True False 2545.24252034675 2139.413524395148 2298.4736692541464 1878.331567728117 2108.798525300945 2830.5657550086553 2364.2012925197287 2377.700752388774 2536.0023348483596 2052.2146687310865 1829.9464612181255 1.390883599213323 1.1691126323832568 1.256033287293083 1.0264407224667018 1.15238263522595 1.5468024966831302 1.2919510721346297 1.2993280419832773 1.3858341697932735 1.121461590392653 1.0 10.837585724829873 -10.915612560450539 1.1652736071110388 0.9997505777349869 1.2826896771951153 0.26887661774410776 0.1350975575973122 0.42559784932607425 1.0250693866185976 0.09661926256339334 0.02280692358182572 1.2144718128538186e-11 10.915612560450539 0.2829390994601284 RADNCS(ph)PVAEEETTGSAESTLPK ddPTM_A549_PD325901_60min_R1 2 RADNCSPVAEEETTGSAESTLPK 23 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 RADNCS(1)PVAEEETTGSAESTLPK;RADNCS(1)PVAEEETTGSAESTLPK 168.26 1.2003999999999999e-40 36419000.0 9288.2 8917.5 10352.8 10683.5 9591.4 9586.400000000001 8946.6 9881.900000000001 8636.7 9956.0 11110.8 True False 10231.131226388557 9669.009020968972 11055.40326444378 11343.395531011074 8917.733152533696 9508.331536760797 9287.06775876737 9684.797752299424 8273.729533933283 9327.376460898407 9744.242037164255 1.0499668611850281 0.9922792336327088 1.134557538932099 1.164112661379684 0.9151797665248587 0.9757897536305337 0.9530826228809552 0.9938995475853215 0.849089082801671 0.9572192916928854 1.0 13.250334253444082 -6.776783897825898 24.99888025604715 0.9369274994059356 1.0821132670358666 0.5599256079338814 0.05734536533009885 150.07280155464773 244494.51217709668 0.010189287529548594 0.01930597570440573 1.6719223452948885e-07 6.776783897825898 0.14518576762993107 RADQLADES(ph)LESTR ddPTM_A549_MK2206_60min_R1 1 RADQLADESLESTR 14 1 A0A0A0MSS0;P60880-2;P60880 A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 1 RADQLADES(0.978)LES(0.01)T(0.012)R 69.935 0.001082 2879000.0 377.41 347.63 303.18 403.91 436.44 178.66 325.52 375.05 539.43 423.48 618.1 True False 441.1075812114007 365.32288215221814 346.1754828834936 502.8679681322088 372.24025414857203 197.56568261509014 384.66277040087056 428.21448604245387 417.2499662927011 327.8155738803668 464.6087113078344 0.9494173709522579 0.7863022652413576 0.7450903834950463 1.0823472653293085 0.80119086252332 0.4252302589397417 0.8279284504116964 0.92166693309961 0.8980674622268222 0.7055734554730874 1.0 8.859872394379453 -8.27376084711211 4.096329437177514 0.9492578952994148 0.7951031656447358 0.0 0.16816775137349044 0.29433004595525436 11.80775239507022 0.02563663827234952 0.032101179074576616 5.324013559475496e-09 8.27376084711211 -0.15415472965467902 RADQLADES(ph)LESTR ddPTM_A549_PD325901_60min_R1 2 RADQLADESLESTR 14 1 A0A0A0MSS0;P60880-2;P60880 A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 1 RADQLADES(1)LESTR;RADQLADES(0.924)LES(0.06)T(0.016)R 108.49 6.327000000000001e-06 4625900.0 701.61 641.9 662.26 629.41 742.25 506.41 564.99 721.27 679.46 822.05 902.1500000000001 True False 772.8369307020168 695.9951657482458 707.2049460928966 668.2872262061758 690.1169206234896 502.28596485970036 586.4910036243913 706.8837040246312 650.9046590857977 770.1456227080694 791.1912692000332 0.9768016417615752 0.8796800379912694 0.8938482685835824 0.844659505509806 0.8722504247566597 0.634847709287234 0.7412758791150305 0.8934422453111185 0.8226893855185257 0.9734000521602787 1.0 9.62788269581195 -10.650201636995021 0.8405233475044941 1.0036924557100584 0.8358069470894399 0.302888429803686 0.08530916398576197 0.6381744850582343 0.7747743083212401 0.06804545832658239 0.016662425854652083 2.2376819721810698e-11 10.650201636995021 -0.16788550862061846 RADQLADES(ph)LESTRR ddPTM_A549_MK2206_60min_R1 3 RADQLADESLESTRR 15 2 A0A0A0MSS0;P60880-2;P60880 A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 1 RADQLADES(0.888)LES(0.056)T(0.056)RR;RADQLADES(0.993)LES(0.003)T(0.003)RR;RADQLADES(1)LESTRR 136.49 2.2149000000000003e-10 14480800.0 1088.53 1124.27 1137.17 1259.69 1193.36 722.93 767.81 940.5999999999999 1640.2599999999998 1506.7399999999998 1648.0099999999998 True False 1272.247251996623 1181.4905408545706 1298.4378054971373 1568.314106549633 1017.8183248344334 799.4299727579041 907.3111383063783 1073.9329304666887 1268.7437289569843 1166.3663875236225 1238.7636342378646 1.0270298681954437 0.9537659228925213 1.0481723628381991 1.2660317619951127 0.8216404620730045 0.6453450445772445 0.7324328170681175 0.8669393424092675 1.0242016264366403 0.9415568517566438 1.0 10.274685220934884 -6.790473487775054 24.999978593549514 0.9399888660968674 1.0633531974218802 0.2489426585115413 0.13966539516920884 366.1863498813584 315305.83374657284 0.024226826325726404 0.04578961776099282 1.620042889082612e-07 6.790473487775054 0.12336433132501279 RADQLADES(ph)LESTRR ddPTM_A549_PD325901_60min_R1 3 RADQLADESLESTRR 15 2 A0A0A0MSS0;P60880-2;P60880 A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 1 RADQLADES(1)LESTRR;RADQLADES(0.888)LES(0.056)T(0.056)RR;RADQLADES(1)LESTRR 165.3 7.3561e-21 19455300.0 1186.53 868.1600000000001 1430.8799999999999 1261.1599999999999 1270.32 1188.39 1343.4 1406.24 1507.29 1187.85 1206.27 True False 1306.9856521227803 941.3228900077846 1527.98812138043 1339.0589888978263 1181.0971055660907 1178.7121458494491 1394.5238221366865 1378.1914400260616 1443.9438430421696 1112.84894828025 1057.9064371755526 1.2354454100990546 0.889797865793285 1.4443509063617412 1.2657631543228982 1.1164476026059906 1.11419318800671 1.3181920188139231 1.3027536194085563 1.3649069447930362 1.051935132610957 1.0 10.046996323653063 -11.02335994317332 1.3395486001036598 1.0011663266537858 1.23948568612184 0.22547695504798881 0.1425657236808899 0.47471167545681464 1.5295320165563826 0.10070082967402695 0.02320251349230846 9.476327399308794e-12 11.02335994317332 0.23831935946805416 RADS(ph)GEEENTK ddPTM_A549_MK2206_60min_R1 7 RADSGEEENTK 11 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 RADS(0.993)GEEENT(0.007)K;RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(0.999)GEEENT(0.001)K;RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(1)GEEENTK 178.51 4.3577000000000003e-16 229604000.0 24401.710000000003 26743.030000000002 24096.75 19588.97 3561.46 2165.23 2487.8199999999997 2671.3900000000003 3876.6310000000003 35569.4 37757.61 True False 28520.122083469032 28104.13599828332 27514.031490114197 24388.268529382294 3037.5739518375335 2394.3532014366497 2939.8246911363167 3050.067713288764 2998.580268207629 27534.247835978844 28381.353379977045 1.0048894322139652 0.9902324114716354 0.9694404323059964 0.8593060451651379 0.10702710019390874 0.08436360202349823 0.10358296349639033 0.10746731040108105 0.1056531810890709 0.9701527431529805 1.0 14.792655766270931 -6.603377484243838 7.007344665659728 0.4312727026039838 0.9764829777777737 0.43485704214211707 0.32462777142858196 0.22690110000422667 16.415026173441966 0.05927361889046579 0.12403672487368406 2.492427393216697e-07 6.603377484243838 0.54521027517379 RADS(ph)GEEENTK ddPTM_A549_PD325901_60min_R1 8 RADSGEEENTK 11 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(1)GEEENTK 217.39 1.0778e-31 445881000.0 24873.03 23862.300000000003 23831.38 22193.039999999997 27481.999999999996 22564.81 20580.079999999998 23597.49 24119.3 26922.9 27705.08 True False 27398.121695043104 25873.259765749128 25448.720756529678 23563.8536767492 25551.759127753085 22381.049668698925 21363.2662062519 23126.81955007721 23105.64969812511 25222.983499309135 24297.5307969722 1.1276093000551841 1.0648514032945802 1.0473788867344878 0.9698044576482469 1.0516195798355434 0.9211244490525722 0.8792360995346099 0.9518176864687469 0.9509464106124061 1.0380883436292323 1.0 14.56852208893753 -5.744396782441572 0.9035365754612631 0.9656567221148712 1.150480101503711 0.5579351799819873 0.0462792707310488 0.6502810350239712 0.6126378640068464 0.006970891684037162 0.09968128467734277 1.8013712104423225e-06 5.744396782441572 0.18482337938883975 RADS(ph)GEEENTKNGGEK ddPTM_A549_MK2206_60min_R1 1 RADSGEEENTKNGGEK 16 2 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 RADS(0.999)GEEENT(0.001)KNGGEK 88.95100000000001 3.9124e-06 14851000.0 2360.2 2950.8 3515.1 2937.3 2385.0 865.47 457.97 810.5 1810.5 5003.5 5581.3 True False 2758.544058650136 3100.9831161141587 4013.594036162568 3656.938631860406 2034.1696593903964 957.0534609475098 541.1772209403011 925.3908570521489 1400.4246407744022 3873.2058749183316 4195.309173956344 0.6575305762384893 0.7391548483159366 0.9566861153113987 0.8716732141130297 0.484867640272646 0.2281246557199431 0.12899578994078031 0.22057751137789647 0.3338072553670093 0.9232229888949385 1.0 12.03456141887845 -6.760228670446506 24.99808327923483 0.5533447136101963 0.8122125388577496 0.21992925246307105 0.27624807498240606 60.02984919598593 1239412.9811333755 0.051156136401767936 0.10200564074293701 1.7368860598344653e-07 6.760228670446506 0.25886782524755325 RADS(ph)GEEENTKNGGEK ddPTM_A549_PD325901_60min_R1 4 RADSGEEENTKNGGEK 16 2 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 RADS(1)GEEENTKNGGEK;RADS(0.999)GEEENT(0.001)KNGGEK;RADS(1)GEEENTKNGGEK;RADS(1)GEEENTKNGGEK 191.65 4.0798e-35 187985000.0 20123.4 21393.6 21173.9 21812.4 23220.1 27147.9 24362.0 25301.7 24164.300000000003 25174.1 26381.6 True False 22166.312753935887 23196.513752845734 22610.888183004234 23159.702408445355 21589.200280996258 26926.81650325755 25289.109241397924 24797.037744700337 23148.758504616824 23584.60302976122 23136.830446741227 0.9580531268083855 1.002579580044116 0.9772681800582987 1.000988552073145 0.9331096725064625 1.163807487168154 1.0930239256241703 1.0717560385715212 1.000515544162501 1.0193532378624948 1.0 14.497903620314437 RADS(ph)LPRPQGITVQFAGR ddPTM_A549_MK2206_60min_R1 2 RADSLPRPQGITVQFAGR 18 2 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 RADS(1)LPRPQGITVQFAGR;RADS(1)LPRPQGITVQFAGR 109.05 6.6426e-10 11202800.0 746.04 729.88 755.28 711.09 1256.3200000000002 1139.6299999999999 828.9 739.44 1399.42 1211.6799999999998 1845.01 True False 871.9533130731917 767.0277744304601 862.3900610602443 885.3070819220429 1071.5169922370403 1260.2248901748303 979.5004005446103 844.2578844400269 1082.4536044145332 937.9606464516919 1386.8430973144607 0.6287324894659515 0.5530746599350452 0.6218367908599116 0.6383613861123781 0.7726302956058759 0.908700409307427 0.7062806185078576 0.6087623654578389 0.7805162721800616 0.6763278760719197 1.0 10.43758885997263 -14.999999999999998 0.08522226075097944 2.067243143742791 0.39950889935772055 0.04067020579352554 0.1278239938138046 61.8307261324682 0.38700206146231314 12.121923478147137 1.0854571586787094 1.000000000000004e-15 14.999999999999998 -1.6677342443850705 RADS(ph)LPRPQGITVQFAGR ddPTM_A549_PD325901_60min_R1 1 RADSLPRPQGITVQFAGR 18 2 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 RADS(1)LPRPQGITVQFAGR 57.238 0.0024305 4643700.0 1506.7 1797.0 1699.8 1630.0 1935.0 2013.7 1804.6 1960.9 1837.1 2160.8 1794.8 True False 1659.659074826083 1948.4394965720483 1815.1586497277588 1730.6813980014101 1799.0922753876064 1997.3010948401065 1873.2750405150096 1921.7883112037093 1759.8930756873392 2024.3667192355656 1574.0509781746061 1.0543871182309195 1.2378503133561867 1.1531765329689385 1.0995078444082191 1.1429695100942512 1.2688922547834725 1.1900980759132764 1.2209187236314079 1.1180661237085536 1.2860871390475428 1.0 10.620266550265258 -9.797581659897928 0.8681417310745445 1.0147958203428233 1.1715043003367442 0.0 0.10089942190467224 0.29677134178066145 0.4644513585873032 0.021915979338453673 0.012295461937593935 1.593743182817537e-10 9.797581659897928 0.1567084799939209 RAEDGS(ph)VIDYELIDQDAR ddPTM_A549_MK2206_60min_R1 4 RAEDGSVIDYELIDQDAR 18 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 RAEDGS(1)VIDYELIDQDAR;RAEDGS(1)VIDYELIDQDAR;RAEDGS(1)VIDYELIDQDAR;RAEDGS(1)VIDYELIDQDAR 144.5 5.623799999999999e-17 74099600.0 1463.0600000000002 1857.92 1428.33 1697.42 2073.06 1913.7200000000003 1747.1399999999999 1666.75 2207.52 2685.23 3047.66 True False 1709.9887596172641 1952.4801921820592 1630.8886716372465 2113.2879762000784 1768.1156201659774 2116.2285801754742 2064.572722653529 1903.0169167077975 1707.5202446850622 2078.6346780267704 2290.841910863023 0.746445554146975 0.852298093082515 0.7119167254203265 0.9224940255279096 0.771819134171454 0.9237776601433981 0.9012288071313258 0.8307063476025192 0.7453679961886993 0.9073671422589313 1.0 11.161662187528433 -10.957264118749034 1.1960421648060877 1.0009175504361205 0.8197831868920094 0.28972187396762006 0.07461444848752005 0.33961502377978786 0.8565334924910952 0.0508652639098589 0.011574918167814002 1.1034073721139404e-11 10.957264118749034 -0.18113436354411117 RAEDGS(ph)VIDYELIDQDAR ddPTM_A549_PD325901_60min_R1 5 RAEDGSVIDYELIDQDAR 18 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 RAEDGS(1)VIDYELIDQDAR;RAEDGS(1)VIDYELIDQDAR;RAEDGS(1)VIDYELIDQDAR;RAEDGS(0.999)VIDY(0.001)ELIDQDAR;RAEDGS(1)VIDYELIDQDAR 261.63 3.0793999999999995e-100 110806700.0 3551.8000000000006 3190.01 2934.3599999999997 3121.94 3450.34 3096.55 3143.93 3160.1000000000004 3349.76 3492.58 3233.58 True False 3912.376121303035 3458.8433380410675 3133.503315340127 3314.7751433598296 3208.0000214268084 3071.3327234578815 3263.573976574506 3097.0693264495103 3208.981236304186 3272.057902752568 2835.870159352487 1.3796034026453263 1.2196761994317904 1.1049530265009024 1.1688740869986414 1.1312224612424744 1.0830300933661778 1.150819252359451 1.0921054746584953 1.1315684625832416 1.1538109006724326 1.0 11.469575764790132 -2.0000000000000004 0.2939021066971476 1.0553681745668904 3.2884729462055975 0.6379212465215456 0.05469847857533743 19.909740041962912 0.2487316809848839 0.019302872306591393 23.608537774408564 0.00999999999999999 2.0000000000000004 2.233104771638707 RAEDGSVIDYELIDQDAR ddPTM_A549_MK2206_60min_R1 2 RAEDGSVIDYELIDQDAR 18 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 ; 215.51 1.1517999999999998e-55 76484000.0 1426.66 1375.67 1374.15 575.96 1823.8400000000001 1278.94 937.1700000000001 1337.99 2016.56 1701.65 1584.89 False True 1667.445329511821 1445.6857270383505 1569.0251329386915 717.0702258558272 1555.5555520262385 1414.2765819083368 1107.4416580750308 1527.654179922524 1559.812379784605 1317.2460831527487 1191.3180722612422 1.399664261238681 1.213517834321352 1.3170497195266442 0.6019133282304325 1.3057432672650024 1.1871527972574922 0.929593602129274 1.2823226772870842 1.3093164756780054 1.105704776770894 1.0 10.218342937166966 RAELPGSSS(ph)PLLAQPR ddPTM_A549_MK2206_60min_R1 2 RAELPGSSSPLLAQPR 16 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RAELPGS(0.002)S(0.117)S(0.88)PLLAQPR;RAELPGS(0.001)S(0.049)S(0.95)PLLAQPR 130.01 2.0058000000000002e-10 117536000.0 1814.56 2247.6000000000004 1780.49 1703.8000000000002 2478.5 1922.37 1619.2 1496.63 2623.8 2984.0 3235.8 True False 2120.8133662673445 2361.9932397242046 2032.9902550274785 2121.2310764864897 2113.9159332490976 2125.7939174340686 1913.3876807357155 1708.781885737149 2029.5134893476252 2309.9123275219936 2432.26155646318 0.8719511931731877 0.9711098847275477 0.8358435998074594 0.8721229305498835 0.8691153826083582 0.8739988969464474 0.7866701982158639 0.7025485730333775 0.834414162389179 0.9496973388342749 1.0 11.2480826639051 -10.593945229166883 1.0197063049240966 0.9948586908003427 0.8473694416369247 0.3678160376705091 0.06384078400266437 0.3924797140561796 0.7631106915950617 0.03835892173211096 0.012096096483137742 2.5471514650731306e-11 10.593945229166883 -0.147489249163418 RAELPGSSS(ph)PLLAQPR ddPTM_A549_PD325901_60min_R1 4 RAELPGSSSPLLAQPR 16 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RAELPGS(0.001)S(0.135)S(0.864)PLLAQPR;RAELPGSS(0.109)S(0.891)PLLAQPR;RAELPGS(0.001)S(0.206)S(0.793)PLLAQPR;RAELPGSS(0.192)S(0.808)PLLAQPR 191.07 6.304499999999999e-35 173382500.0 5175.639999999999 5615.3 4966.6 5137.29 6073.8 6093.450000000001 5251.11 5901.71 5852.86 6187.34 7365.199999999999 True False 5701.067162695205 6088.521037897062 5303.663342592003 5454.608735667891 5647.197241472478 6043.826963476908 5450.943864567647 5783.995764248072 5606.884648068912 5796.6702964619535 6459.327091849563 0.8826100740259559 0.9425937023036987 0.8210860461431366 0.8444546402597517 0.8742702082076262 0.9356743941800165 0.843887263650992 0.8954486561837641 0.8680292185766114 0.897410862468359 1.0 12.657168162922302 -10.739809220701321 0.7281236604698083 1.010728682651489 0.8774541925945316 0.12585365798676718 0.04610581525668166 0.4393813330604948 0.35954542966055153 0.035754954373444225 0.006758502168280073 1.8205004025386095e-11 10.739809220701321 -0.13327449005695735 RAEPPKPEVVDSTESIPVS(ph)DEDS(ph)DAMVDDPNDEDFVPFRPR ddPTM_A549_PD325901_60min_R1 1 RAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPR 41 3 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 2 RAEPPKPEVVDSTES(0.004)IPVS(0.998)DEDS(0.998)DAMVDDPNDEDFVPFRPR 86.146 1.0081e-07 16210000.0 611.87 820.71 862.66 937.19 1035.5 898.91 854.28 999.29 1136.3 998.09 1181.1 True False 673.9865919651132 889.8741119819956 921.2052951959932 995.0780977870801 962.7700522810687 891.5895749926602 886.7900928799535 979.3583770221607 1088.5452625896921 935.0704270648948 1035.8321876097762 0.6506716049443917 0.8590910020236149 0.8893383563622511 0.9606557024292345 0.9294652780608207 0.8607471226106986 0.8561136673366531 0.9454797685733911 1.0508895896559785 0.9027238564796938 1.0 10.01657457946911 -3.430482811978826 0.26721659365914885 1.0250842841058918 2.3356472092688783e-11 0.46947290673314546 0.07177238620427209 10.75315146471627 0.259016733545011 0.030547129196304257 4.395853246142989 0.00037112241707014024 3.430482811978826 -1.0250842840825354 RAEPPKPEVVDSTESIPVS(ph)DEDSDAMVDDPNDEDFVPFRPR ddPTM_A549_MK2206_60min_R1 1 RAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPR 41 3 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 RAEPPKPEVVDS(0.001)T(0.001)ES(0.003)IPVS(0.751)DEDS(0.244)DAMVDDPNDEDFVPFRPR 48.227 0.0011638 7919900.0 1433.1 1909.7 1948.9 1517.5 2085.0 1623.3 1417.5 1782.4 2252.9 2181.8 2585.5 True False 1674.972244068939 2006.8955730117966 2225.2833253896706 1889.2875681231644 1778.2992619827992 1795.0765285406676 1675.0414015828037 2035.0606583710696 1742.6217471420318 1688.9298646740917 1943.448993830135 0.8618555204620607 1.0326463824793373 1.1450176117069575 0.972131285215657 0.9150223482213136 0.9236550762276216 0.8618911054010451 1.0471387028071095 0.8966645137970335 0.8690374020804946 1.0 10.924403529044135 -6.510974799558146 24.33406380246142 0.94635039320582 1.0223628158179223 0.1506785692040643 0.0803543213427603 572.7892482703369 1170894.5771006565 0.010947462422586743 0.02421280065095715 3.083366861002763e-07 6.510974799558146 0.07601242261210228 RAEPPKPEVVDSTESIPVS(ph)DEDSDAMVDDPNDEDFVPFRPR ddPTM_A549_PD325901_60min_R1 4 RAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPR 41 3 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 RAEPPKPEVVDS(0.001)T(0.001)ES(0.003)IPVS(0.76)DEDS(0.236)DAMVDDPNDEDFVPFRPR;RAEPPKPEVVDSTESIPVS(0.993)DEDS(0.007)DAMVDDPNDEDFVPFRPR;RAEPPKPEVVDSTESIPVS(0.992)DEDS(0.008)DAMVDDPNDEDFVPFRPR;RAEPPKPEVVDS(0.005)T(0.005)ES(0.006)IPVS(0.823)DEDS(0.161)DAMVDDPNDEDFVPFRPR 132.6 1.2712e-30 39400200.0 3630.11 3653.54 2900.68 3619.81 4660.389999999999 4283.72 3875.22 4162.01 4102.52 3615.2099999999996 4552.84 True False 3998.6360948542597 3961.436637899744 3097.537588005833 3843.3974425150177 4333.060283872686 4248.834804582837 4022.693617701749 4078.9954455163193 3930.1053512975996 3386.945023624402 3992.8695428306614 1.0014442124797072 0.9921277405650889 0.7757672908616741 0.962565243188567 1.085199563219602 1.0641055909807446 1.0074693336587062 1.0215699265307328 0.9842809310798152 0.84824835554815 1.0 11.963210220899047 -6.523682010252423 24.999956862715973 1.0072777735822958 0.9198731670297681 0.15918384036428546 0.07863537684907418 26.533183019579678 825791.6391048523 0.008903438923183736 0.018661912078747414 2.9944563704387133e-07 6.523682010252423 -0.08740460655252769 RAEPPKPEVVDSTESIPVSDEDS(ph)DAMVDDPNDEDFVPFRPR ddPTM_A549_MK2206_60min_R1 1 RAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPR 41 3 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 RAEPPKPEVVDS(0.004)T(0.004)ES(0.005)IPVS(0.469)DEDS(0.519)DAMVDDPNDEDFVPFRPR 43.468999999999994 0.0054336 9342300.0 1112.4 1392.4 1285.7 1108.4 2105.2 1617.6 976.12 1212.9 1893.4 1976.6 1787.0 True False 1300.1459244311545 1463.2672125787426 1468.0315929260098 1379.9580497579666 1795.5278687415757 1788.7733583240233 1153.4683688980638 1384.8322893504653 1464.5479231384995 1530.0846871916813 1343.238581309012 0.9679188362533014 1.0893576412559267 1.0929045765610637 1.0273365200790843 1.336715527476734 1.3316870012628947 0.8587218867507412 1.0309652422289117 1.0903110910582015 1.1391012054616418 1.0 10.391499858602236 -10.091437027524574 0.44326632153361 0.9933484775651737 1.107203965955729 0.0 0.138496408361582 3.150215531257975 1.1170270719895212 0.1536870951827908 0.04274303924139133 8.101454038290296e-11 10.091437027524574 0.11385548839055515 RAES(ph)MLQQADK ddPTM_A549_MK2206_60min_R1 2 RAESMLQQADK 11 1 P13797-3;P13797;A0A0A0MSQ0;P13797-2;H7C4N2 P13797-3 PLS3 Plastin-3 1 RAES(1)MLQQADK;RAES(1)MLQQADK 75.669 0.0011556 3118700.0 726.51 871.96 506.27 731.41 924.26 849.24 732.18 523.41 883.8 1084.7 973.61 True False 849.1271265358479 916.3390395577142 578.0666987249366 910.605482834243 788.3025783598188 939.1060131201124 865.207628508569 597.6049703758986 683.6207111385893 839.6655166431322 731.8357667309831 1.1602700566669355 1.252110215452961 0.7898858254866208 1.2442757299247635 1.0771577643452241 1.283219618132329 1.1822428854131317 0.8165834433664313 0.9341176561952358 1.1473414594012135 1.0 9.515376115460569 -8.240657436577834 24.695960808873274 0.956596698125521 1.139005215986703 0.23121435371707133 0.14493886305279213 640.4887627329956 761117.5215835316 0.020573183298885068 0.026543653308986063 5.745694932587145e-09 8.240657436577834 0.18240851786118206 RAET(ph)FGGFDSHQMNASK ddPTM_A549_MK2206_60min_R1 2 RAETFGGFDSHQMNASK 17 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RAET(0.832)FGGFDS(0.168)HQMNASK;RAET(0.981)FGGFDS(0.019)HQMNASK 84.946 3.2148000000000005e-05 27984000.0 3689.8 4115.6 3740.7 3632.9 6230.5 4444.9 4232.6 4934.4 6978.6 5453.799999999999 6850.5 True False 4312.548033051125 4325.066460851102 4271.187508484347 4522.960663087079 5314.001703493444 4915.256367714173 5001.608632338185 5633.866310966225 5397.958242534236 4221.782792171401 5149.331785818346 0.8374966330443518 0.8399277111571382 0.8294644210434301 0.87835875628439 1.0319788905676288 0.9545425643869299 0.9713121702728493 1.0940965828774762 1.0482832466536 0.8198700273690877 1.0 12.330169514660255 -6.673819310075691 3.702564733643923 1.0203610798779552 0.8379496731202426 0.4564283226602134 0.07014992887090485 0.06935544570366395 1.8438585354879846 0.005640216124599606 0.012144102889744669 2.1192426710863695e-07 6.673819310075691 -0.1824114067577126 RAET(ph)FGGFDSHQMNASK ddPTM_A549_PD325901_60min_R1 2 RAETFGGFDSHQMNASK 17 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RAET(0.981)FGGFDS(0.019)HQMNASK;RAET(0.734)FGGFDS(0.266)HQMNASK 94.463 1.0945999999999999e-06 14570100.0 9374.0 9169.400000000001 10827.9 12020.9 12793.9 11546.5 10971.4 12380.099999999999 11713.2 11907.2 13675.3 True False 10325.641579225934 9942.137518012096 11562.746407452178 12763.403691555304 11895.300600558925 11452.469132229875 11388.922630780451 12133.169193499427 11220.93493775022 11155.377359904533 11993.324794869173 0.8609490492280601 0.8289725900081861 0.9640984968904369 1.0642089587214028 0.9918267706422673 0.9549036091417552 0.9496051199791329 1.0116601860636742 0.9355983540569679 0.930132181918135 1.0 13.549944038313384 -5.79421760963681 6.815133769894307 0.9772310827354366 0.8447802226406886 0.6541541219140965 0.03733642067797677 0.07285759385070519 10.47706961328816 0.0052656154787412875 0.01716613595791814 1.6061362731570204e-06 5.79421760963681 -0.13245086009474794 RAETFAGYDCTNS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 RAETFAGYDCTNSPTK 16 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RAETFAGYDCT(0.115)NS(0.869)PT(0.016)K 144.27 1.0598999999999999e-14 64450000.0 12772.0 12790.0 15736.0 13537.0 16027.0 13870.0 14986.0 15379.0 15408.0 15814.0 17743.0 True False 14068.604037750541 13867.8581865089 16803.9395882551 14373.149745242386 14901.318810148427 13757.047318583838 15556.300430653866 15072.253780407886 14760.455342763325 14815.501341165878 15560.723482143976 0.9041098926983921 0.8912090882163899 1.0798944925367848 0.9236813289392143 0.9576237780491235 0.8840878982503695 0.9997157554084689 0.9686088052206177 0.9485712768883168 0.9521087729736188 1.0 13.925621518269214 -14.99999999981986 0.21253005403971317 1.2458230233857968 0.9439723631442718 0.005584405506194656 0.05422995785174412 78.65073370934432 0.9527746317317634 8.064712060477028 0.0376384597092917 1.0000000004147885e-15 14.99999999981986 -0.30185066024152496 RAEVLGHKT(ph)PEPAPR ddPTM_A549_MK2206_60min_R1 6 RAEVLGHKTPEPAPR 15 2 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJ51;K7ER34 Q9UHD8 SEPT9 Septin-9 1 RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR 89.04899999999999 1.383e-05 237678000.0 12747.519999999999 14286.449999999999 12899.449999999999 12150.179999999998 17118.0 13596.029999999999 13266.07 12884.66 19274.8 19020.3 19844.1 True False 14898.989729058456 15013.569282638318 14728.785977575955 15126.97464544231 14599.964876077482 15034.752870285702 15676.343200208526 14711.100012616347 14909.088575530754 14723.601019827942 14916.262300701826 0.9988420308455853 1.0065235499332774 0.987431414160835 1.0141263501869746 0.9787951285484258 1.0079437172124748 1.05095652544746 0.9862457307367257 0.9995190668395034 0.9870838098050327 1.0 13.864598451617734 RAEVLGHKT(ph)PEPAPR ddPTM_A549_PD325901_60min_R1 4 RAEVLGHKTPEPAPR 15 2 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJ51;K7ER34 Q9UHD8 SEPT9 Septin-9 1 RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR 121.26 1.7772000000000003e-07 222454000.0 14383.8 12497.5 13209.699999999999 14798.7 15529.3 15284.999999999998 14368.4 14256.999999999998 15677.900000000001 15945.300000000001 16178.600000000002 True False 15844.032787206103 13550.70818498007 14106.18967837909 15712.782088713779 14438.57554117662 15160.524027725593 14915.197324690176 13972.632950599871 15019.012384365873 14938.511036758082 14188.734764595321 1.1166628349936594 0.9550328771239492 0.9941823504642427 1.10741248951396 1.0176083900873754 1.068490198686013 1.0511999534946255 0.9847694796202208 1.0585166777408734 1.0528430677295944 1.0 13.792458326930555 -3.220034696513311 17.335457147552344 1.0311480864775455 1.333506937638643 0.0 0.0491840205722116 0.0 0.0 0.006000445021051115 0.0 0.0006025114485030645 3.220034696513311 0.3023588511610975 RAEVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 RAEVSPK 7 1 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 RAEVS(1)PK;RAEVS(1)PK 60.102 0.012144 56362000.0 6330.1 6013.9 5111.799999999999 4389.799999999999 6840.8 5427.3 4965.5 5830.7 7233.799999999999 8470.8 8940.1 True False 7398.46612391374 6319.9818225562385 5836.730105560529 5465.301197065612 5834.527381952963 6001.613283649829 5867.667075526919 6657.219580769857 5595.355850004894 6557.240396773896 6720.026435792221 1.1009578897648398 0.9404697857875582 0.8685576107964283 0.8132856692283696 0.8682298258347749 0.8930937014896284 0.8731613084547609 0.9906537785792268 0.832638964067596 0.9757759823456507 1.0 12.714251193069593 -5.284652031425358 3.4686466688488666 0.9057356999910905 1.1203162303048757 0.47859925479365817 0.05954773111018376 0.21605552235636913 4.484416848450297 0.009723108172534477 0.1171692426782646 5.1921588222915165e-06 5.284652031425358 0.2145805303137852 RAEVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 RAEVSPK 7 1 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 RAEVS(1)PK;RAEVS(1)PK 86.882 0.0054294 93352000.0 10239.599999999999 9835.7 9195.8 9077.6 10661.2 9816.8 7956.1 8665.3 9739.8 12096.8 13469.2 True False 11279.116654004882 10664.588957392154 9819.882286837588 9638.302735274592 9912.394091143346 9736.855235549672 8258.873739244977 8492.463793703655 9330.470077066862 11333.0059835472 11812.573788293625 0.9548398897776703 0.9028167060391924 0.8313075933179936 0.8159358754504665 0.8391392315336582 0.8242788921411005 0.699159547043812 0.7189342429437156 0.7898761306628577 0.9594019209241528 1.0 13.528035720834296 -10.686739304663991 1.0162144455308362 0.9969788437096501 0.8166318978704717 0.4380525371581988 0.06932164205408047 0.3789613773062129 0.7133320892392014 0.04712067104678704 0.013265479194665258 2.0571250624712532e-11 10.686739304663991 -0.18034694583917832 RAFQLEEGEET(ph)EPDCK ddPTM_A549_PD325901_60min_R1 2 RAFQLEEGEETEPDCK 16 1 P38432 P38432 COIL Coilin 1 RAFQLEEGEET(1)EPDCK;RAFQLEEGEET(1)EPDCK 119.37 7.186799999999999e-08 28053000.0 8615.3 8401.7 9872.7 9688.3 10615.7 9082.0 9155.9 9943.5 8320.6 10632.2 10982.7 True False 9489.918913751351 9109.740744768713 10542.720791367958 10286.724287274264 9870.089854176858 9008.039203127508 9504.332784800721 9745.169091975149 7970.914117665921 9960.881077497392 9631.897525071454 0.9852595388447045 0.945788794062272 1.0945632222441806 1.067985229338074 1.0247295331460284 0.9352299668554335 0.9867560114776256 1.011760046928329 0.8275538747082746 1.0341556325292713 1.0 13.233604327833449 -7.8507444234150245 1.1915438061514005 0.9231645910340125 1.021816098934129 0.0 0.06923587251418806 0.49673460083283427 1.4239301071190351 0.013847304078957108 0.021795976730763597 1.41011839040405e-08 7.8507444234150245 0.09865150790011645 RAFS(ph)TEK ddPTM_A549_MK2206_60min_R1 2 RAFSTEK 7 1 H0YJD9;Q9NZ32 H0YJD9 ACTR10 Actin-related protein 10 1 RAFS(0.796)T(0.204)EK;RAFS(0.998)T(0.002)EK 111.61 0.0033723 45987000.0 7127.099999999999 7720.5 6735.4 6571.0 9709.900000000001 6766.9 5476.2 6345.799999999999 9704.8 11320.8 8989.099999999999 True False 8329.980239134558 8113.440473078276 7690.580999450762 8180.895294983403 8281.586572626757 7482.968866495323 6471.154654919043 7245.336583197448 7506.678295381065 8763.423417362928 6756.85838346102 1.232818532873816 1.2007711295145398 1.1381888687019466 1.21075429300221 1.2256563779548588 1.1074627351687032 0.9577164841516728 1.072293686209569 1.1109716778666552 1.296967158408032 1.0 12.722136902750695 -7.459564301324593 4.817123683199355 1.048395276653663 1.1973246396456083 0.23744474341578403 0.08676273083112311 0.10500262429112667 4.861890220428302 0.00802179116430914 0.012814447740090822 3.470848829482841e-08 7.459564301324593 0.14892936299194526 RAFS(ph)TEK ddPTM_A549_PD325901_60min_R1 2 RAFSTEK 7 1 H0YJD9;Q9NZ32 H0YJD9 ACTR10 Actin-related protein 10 1 RAFS(0.735)T(0.265)EK;RAFS(0.963)T(0.037)EK 108.43 0.0037485 73555000.0 10453.6 11101.2 10987.3 10098.9 14562.599999999999 11540.9 12770.099999999999 11649.1 10350.5 12718.3 13388.900000000001 True False 11514.841776466425 12036.73708366478 11732.96425000224 10722.686116734003 13539.773214242668 11446.914736773202 13256.073143566844 11416.74956195784 9915.50447983332 11915.264367481339 11742.15017922998 0.9806416713043213 1.0250879864367497 0.9992176961555143 0.9131790986373817 1.153091470265165 0.9748567819393927 1.1289306422783414 0.9722878167707544 0.84443686449968 1.0147429717393301 1.0 13.51940899318281 -8.52087329582888 24.9770610823993 0.9255829282680411 1.0247024135196314 0.12744444506746433 0.07683061439082718 82.99465679737969 1033673.0970081061 0.013415734052026678 0.015330332412863705 3.013885188303921e-09 8.52087329582888 0.09911948525159031 RAFS(ph)WLR ddPTM_A549_MK2206_60min_R1 2 RAFSWLR 7 1 Q9P206-2 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RAFS(1)WLR;RAFS(1)WLR 62.823 0.011289 11296700.0 1342.02 1382.6 1507.1100000000001 1169.38 2438.9 1656.22 1471.4299999999998 1135.03 1987.81 1705.79 2200.3900000000003 True False 1568.5201667611452 1452.9684344379277 1720.8408602432282 1455.8781524954632 2080.141040791295 1831.4801010901415 1738.7697845015755 1295.9239783835917 1537.57420888029 1320.450854277394 1653.9724353254264 0.9483351313847814 0.8784719765611146 1.040428983875203 0.8802312066397967 1.2576636686100624 1.1073220218024913 1.0512689010802436 0.7835221136128625 0.9296250505999305 0.798351185349464 1.0 10.691719475791174 -5.752026416552782 24.984933689356318 0.9862428261644055 0.9134035612920253 0.04001207204617263 0.13106787695025926 509.161786187822 1351443.0469992037 0.016451536190165053 0.0620330926998925 1.7700012923060406e-06 5.752026416552782 -0.07283926487238024 RAFS(ph)WLR ddPTM_A549_PD325901_60min_R1 4 RAFSWLR 7 1 Q9P206-2 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RAFS(1)WLR;RAFS(1)WLR;RAFS(1)WLR;RAFS(1)WLR 72.928 0.010713 31041900.0 3301.2 4169.19 3342.89 3784.55 3822.96 3701.63 3754.48 3652.0299999999997 4171.03 3990.09 4559.790000000001 True False 3636.335393785005 4520.542273073577 3569.758617830583 4018.313058163332 3554.448478096026 3671.485152551514 3897.358790930287 3579.18739668789 3995.73611424754 3738.1550364469826 3998.964736890341 0.9093191946005199 1.1304281409064945 0.8926706917166977 1.0048383325550494 0.888842165900173 0.9181089092089668 0.9745919375025386 0.8950284966681461 0.9991926353805981 0.9347806951040613 1.0 11.965410844095267 -8.922534499289029 24.999999999750916 0.9996473334984036 0.9545368513781395 0.0006580381391002588 0.06950087590982627 61.35784302180387 19799.195931528277 0.010815583738193732 0.011514040057989618 1.195268572696976e-09 8.922534499289029 -0.04511048212026414 RAGAES(ph)PTMSVDGR ddPTM_A549_MK2206_60min_R1 2 RAGAESPTMSVDGR 14 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 RAGAES(0.98)PT(0.017)MS(0.003)VDGR;RAGAES(0.77)PT(0.222)MS(0.008)VDGR 48.477 0.0078398 39719000.0 1239.49 1663.75 1150.05 1222.65 1707.8899999999999 1399.0500000000002 1220.93 1356.73 1941.32 1861.08 2405.0 True False 1448.685609378975 1748.4277685491845 1313.1443831722459 1522.199304886844 1456.6616434282023 1547.0965423857708 1442.7571770260959 1549.0506323113666 1501.6141196510139 1440.6607354238042 1807.7721253767052 0.8013651660200793 0.9671726563351261 0.7263882237915421 0.8420305211696119 0.8057772453619738 0.8558028529527113 0.7980857524979553 0.8568837911407523 0.8306434746791476 0.7969260700507803 1.0 10.819997118218149 -10.656337462618758 0.6438778990610314 1.0178058135708827 0.8297915017187981 0.0 0.08141066524790701 0.5327425316208559 0.3363160782632974 0.056131160873466125 0.010581583935015614 2.2062896993882073e-11 10.656337462618758 -0.18801431185208461 RAGAES(ph)PTMSVDGR ddPTM_A549_PD325901_60min_R1 2 RAGAESPTMSVDGR 14 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 RAGAES(0.912)PT(0.088)MSVDGR;RAGAES(0.978)PT(0.022)MSVDGR 93.381 1.917e-05 50484000.0 3718.87 3570.33 3949.29 3635.6 4811.5 4757.8 4518.1 4947.4 5190.3 4794.2 5483.299999999999 True False 4096.406944712605 3871.214239174225 4217.312568410015 3860.1627549533264 4473.5568387738895 4719.05405424356 4690.0387678991865 4848.720225839783 4972.169740754447 4491.4933938167105 4808.888861502571 0.8518406356832822 0.8050122077399471 0.8769827479631722 0.8027140709896115 0.9302682943219643 0.9813190094746874 0.9752853315960709 1.0082828623169233 1.0339539723113622 0.9339981694676371 1.0 12.231487869055808 -7.108991242381696 1.5409772219824902 1.0133178349216676 0.832300610040565 0.7945971753456128 0.03542212318837039 0.07854734998784939 0.36646523554662647 0.004024257862022435 0.008410719962658943 7.780522404305869e-08 7.108991242381696 -0.1810172248811026 RAGAESPT(ph)MSVDGR ddPTM_A549_MK2206_60min_R1 1 RAGAESPTMSVDGR 14 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 RAGAES(0.195)PT(0.58)MS(0.225)VDGR 45.347 0.014515 19870000.0 422.08 718.33 571.09 490.51 428.06 517.8 433.81 527.68 587.5 724.36 825.31 True False 493.31678513475515 754.8899287644994 652.0791494159716 610.684972019831 365.0929410476529 572.5932523121775 512.627661672406 602.480255952225 454.4321880447177 560.7265729101315 620.3627496027648 0.7952069743881937 1.2168524451990002 1.051125571020368 0.984399808677857 0.5885152538275902 0.9229974763617328 0.8263353368664632 0.9711741337435389 0.7325265553673282 0.9038688626439612 1.0 9.276968250460786 -6.537977218940149 24.998533456685173 0.8593697521961919 1.0368278146734913 0.23308828143349858 0.1413706594227668 260.74203239834145 431709.4760254218 0.021037754235686736 0.04380534292586878 2.897495572798085e-07 6.537977218940149 0.17745806247729934 RAGAESPT(ph)MSVDGR ddPTM_A549_PD325901_60min_R1 1 RAGAESPTMSVDGR 14 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 RAGAES(0.476)PT(0.519)MS(0.005)VDGR 63.145 0.0017795000000000003 11961000.0 547.72 832.42 788.3 824.83 1001.3 725.49 815.05 552.17 767.93 654.38 592.47 True False 603.3241311898471 902.5709547782443 841.7987784329872 875.7778757751552 930.9721422974734 719.5818499754431 846.0671737624738 541.1565361810146 735.6565726485104 613.062335122811 519.5999459767712 1.1611320129290752 1.73704974715027 1.620090196219189 1.685484924616037 1.7917094670735256 1.3848766835853599 1.6283049686850763 1.0414868984709384 1.4158134125006203 1.17987374685027 1.0 9.02125747056235 -9.874732085052493 0.3259515662764912 0.9094200881691705 1.617714297353849 0.3965643463653613 0.21442518967186708 1.234616551481869 0.26253725233383846 0.3262224372804113 0.10794055722482282 1.3343443312825688e-10 9.874732085052493 0.7082942091846784 RAGDLLEDS(ph)PK ddPTM_A549_MK2206_60min_R1 7 RAGDLLEDSPK 11 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK 128.46 8.995e-08 844302000.0 26242.149999999998 28242.159999999996 24189.530000000002 22436.37 37088.08 28001.79 24184.97 27633.449999999997 39605.11 37072.22 39900.34 True False 30671.1833610311 29679.565311981365 27619.96908923661 27933.281657206906 31632.472562282495 30964.920831716154 28579.065993677646 31550.5761613914 30634.615821364623 28697.579754225004 29991.9843846375 1.0226460166050733 0.9895832476888003 0.9209116921047783 0.9313582355529265 1.0546975537399015 1.0324398824232854 0.952890133148923 1.0519669441263193 1.0214267728498916 0.9568416476278403 1.0 14.87228935914739 -6.7556687808229565 24.999999788051404 1.0134415847973435 0.964570899596402 0.21424459561342823 0.04007857792686144 140.98273338068995 610773.3419960174 0.005156601507434587 0.010508425221237983 1.7552186271435567e-07 6.7556687808229565 -0.04887068520094151 RAGDLLEDS(ph)PK ddPTM_A549_PD325901_60min_R1 7 RAGDLLEDSPK 11 1 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK 150.29 7.7319e-12 1517484300.0 33846.4 34426.3 34705.0 33297.9 37270.399999999994 31099.5 33546.5 35560.5 34003.4 36087.700000000004 41816.200000000004 True False 37282.461611597224 37327.525120110375 37060.28999811855 35354.635657982304 34652.6556798999 30846.235983006365 34823.130414849176 34851.21793082743 32574.35534800873 33809.1164632346 36673.072494731976 1.0166168001591027 1.0178455902616943 1.0105586327254743 0.9640489125382373 0.9449073481606346 0.8411140350303993 0.9495558470005877 0.9503217363593887 0.8882363306943529 0.9219057516408318 1.0 15.162433520625525 -6.382438482777484 2.4833916423275175 0.9383814085760076 1.0171442376721112 0.48262153015999953 0.038562068282485984 0.27395142977377224 3.264445465218604 0.007119231036985554 0.019372045710956843 4.145352982404792e-07 6.382438482777484 0.07876282909610355 RAGDLLEDS(ph)PKRPK ddPTM_A549_MK2206_60min_R1 8 RAGDLLEDSPKRPK 14 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK 148.44 8.3413e-14 5706875000.0 20917.0 23681.399999999998 23126.4 22042.7 30397.1 23839.100000000002 23008.399999999994 23050.7 33462.200000000004 35070.5 35209.200000000004 True False 24447.278228448806 24886.68210856238 26406.071269070595 27443.162489534396 25925.726856794867 26361.73773888614 27188.7284544464 26318.20731480811 25883.065128153085 27148.04969247994 26465.783915514992 0.9237314982427979 0.9403342137155856 0.997743779415905 1.0369298932213542 0.9795941408558267 0.9960686531348932 1.0273161959320463 0.9944238719254271 0.9779821829868299 1.0257791637362 1.0 14.691840766727468 -5.702566136847757 4.483780690283312 0.9956192258441567 0.9283769251800766 0.6500556742541017 0.019695453812378246 0.09358253031979975 3.726402633556733 0.002581389281019364 0.010630021876880436 1.983507573957119e-06 5.702566136847757 -0.0672423006640801 RAGDLLEDS(ph)PKRPK ddPTM_A549_PD325901_60min_R1 16 RAGDLLEDSPKRPK 14 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK 171.71 3.9446999999999995e-23 9654952600.0 66879.70000000001 71389.9 74469.49999999999 75308.1 82899.9 85134.9 76461.1 86831.99999999999 86844.4 87272.5 93227.6 True False 73669.27790976723 77406.17741587576 79523.44809148206 79959.7102998956 77077.29701312922 84441.58960078622 79370.86900161955 85100.06764161393 83194.63187753607 81762.09945598207 81761.19621844815 0.9010298444379278 0.946734893763825 0.9726306826408543 0.9779664926410888 0.9427124427973808 1.0327831967523644 0.9707645273383455 1.0408368710047373 1.0175319800270302 1.0000110472641752 1.0 16.319128683527996 -3.725945705728078 0.3926695010244376 1.0104482918256896 0.579134783100933 0.6450016235041693 0.023781952578414936 6.795157142543485 0.2793440115833084 0.005235828157866441 1.8007200647550639 0.00018795517783810274 3.725945705728078 -0.4313135087247566 RAGDLLEDSPKRPK ddPTM_A549_MK2206_60min_R1 1 RAGDLLEDSPKRPK 14 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 0 39.005 0.034885 1915000.0 284.24 537.69 332.99 283.79 386.15 234.57 343.54 379.72 714.38 478.72 631.61 False True 332.212762999201 565.0561243403217 380.212989133104 353.31856273981737 329.34784652981193 259.3920417050359 405.95677114621236 433.5464728437291 552.5740706304433 370.57681951452054 474.7638054508028 0.6997432390275724 1.1901836615446781 0.8008466205044423 0.7441986071459903 0.6937088353167236 0.5463601873751417 0.8550710194951444 0.9131834985442149 1.1638925804500984 0.7805498550224285 1.0 8.89106614226288 -8.48316516206874 3.0099883288612865 1.076879150709457 0.7915484746733833 0.12930530652806216 0.17755334693984778 0.2015943812996195 3.6678542035345525 0.02793574155916732 0.033206708296963885 3.287265924712333e-09 8.48316516206874 -0.28533067603607376 RAGDLLEDSPKRPK ddPTM_A549_PD325901_60min_R1 2 RAGDLLEDSPKRPK 14 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 0 ; 101.89 8.1085e-06 5326200.0 1023.1800000000001 962.03 1161.4499999999998 1198.31 1104.24 1200.43 1208.56 1527.26 1424.58 1322.05 1362.0900000000001 False True 1127.052480374695 1043.1036443445792 1240.272981366223 1272.3268871405337 1026.6819918211952 1190.6540960812986 1254.5524121494075 1496.7976011877086 1364.709856710396 1238.575537377536 1194.5615649999156 0.9434863077775105 0.873210452191849 1.0382662708274148 1.0650994678040087 0.859463439895011 0.9967289514135529 1.0502199709978917 1.2530100122447974 1.1424357661385935 1.0368452942629403 1.0 10.222265493610164 -7.748616975021158 3.6625043220695392 1.0854684570958377 0.9599523378899477 0.3923338129333188 0.08370327723006898 0.23085528404818592 6.642645255216315 0.014805404192336922 0.02170746032152443 1.7839514255350414e-08 7.748616975021158 -0.12551611920589 RAGELTEDEVER ddPTM_A549_MK2206_60min_R1 2 RAGELTEDEVER 12 1 P62269 P62269 RPS18 40S ribosomal protein S18 0 ; 128.31 8.8646e-08 9805300.0 852.84 687.85 565.95 491.75 891.97 520.39 438.62 671.31 782.79 898.23 1081.28 False True 996.7785420638851 722.858626955105 646.210220126371 612.2287720754964 760.762394585514 575.4573243930752 518.3115764107581 766.4702483006517 605.4893148587647 695.3192191521716 812.7683341901557 1.2263993319290394 0.8893784323861031 0.7950730767214946 0.7532635639471887 0.9360138216304151 0.7080213391512875 0.6377113312703121 0.9430365530472647 0.7449715858604109 0.8554949668960583 1.0 9.666700384949822 -5.26799171627203 3.867478044697687 0.8449822217619892 1.2611082050376372 0.5356510578717214 0.10649774657398942 0.17472397863068978 5.167228102587587 0.01718592760853141 0.20308846930693725 5.395209132327004e-06 5.26799171627203 0.416125983275648 RAGELTEDEVER ddPTM_A549_PD325901_60min_R1 2 RAGELTEDEVER 12 1 P62269 P62269 RPS18 40S ribosomal protein S18 0 ; 125.61 3.5107e-06 10210700.0 988.4 958.8 1130.49 730.25 1036.0500000000002 1112.26 803.16 1103.31 1093.9499999999998 1101.09 1048.53 False True 1088.741640378378 1039.601440908893 1207.2118495886186 775.3558839819201 963.2814221784662 1103.2021233286275 833.7246933060155 1081.3036165200483 1047.9750858135997 1031.5669894868051 919.567457179306 1.1839714768919718 1.130533092262509 1.3128040147175686 0.8431745576993965 1.0475375293654356 1.1996967864789443 0.9066487583884213 1.175882865447255 1.1396391614685595 1.1217958850469198 1.0 9.844811600810402 -14.999835935513147 0.013428397863334888 5.1914806529940345e-06 1.9754173494773961 0.029408340683376055 0.12844426334838366 11114.439303165373 11.614856609096483 1039.4179916474861 700.6221482058028 1.0003778438067127e-15 14.999835935513147 1.9754121579967432 RAGGGGGLGAGS(ph)PALSGGQGR ddPTM_A549_MK2206_60min_R1 1 RAGGGGGLGAGSPALSGGQGR 21 1 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 RAGGGGGLGAGS(0.99)PALS(0.01)GGQGR 55.986000000000004 0.0026331999999999996 10506000.0 1112.5 1253.6 1235.5 1079.7 1806.7 987.73 1210.2 820.7 2068.0 1931.1 2030.0 True False 1300.2628019863885 1317.402885441477 1410.7124780742668 1344.2265484695752 1540.9368233210178 1092.2509329978895 1430.0776749174659 937.0367382883392 1599.6013019174047 1494.8631687928025 1525.8949748501923 0.8521312563559915 0.8633640631595997 0.9245147938263354 0.8809430338425142 1.0098577220049514 0.7158100334560205 0.9372058355837147 0.6140899299968758 1.0483036698344514 0.9796632097432286 1.0 10.575439951633284 RAGNALT(ph)PELAPVQIK ddPTM_A549_MK2206_60min_R1 1 RAGNALTPELAPVQIK 16 1 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 RAGNALT(1)PELAPVQIK 90.654 6.370499999999999e-06 1145200.0 911.74 1027.6 842.63 913.44 990.26 1066.0 1027.0 681.62 1262.3 1214.1 1290.6 True False 1065.6194220971424 1079.900450765525 962.1276045323507 1137.2328410058792 844.5940657894902 1178.8034124464693 1213.5926062966762 778.2417223737026 976.3910654788884 939.8339667709291 970.1084012520482 1.098453967331718 1.1131750321631853 0.9917732938820061 1.1722739845754717 0.870618236786151 1.2151254549750046 1.250986595653002 0.8022214026486965 1.0064762496837794 0.9687927303360675 1.0 9.9220021548176 -8.251174587457642 24.999615882417967 0.9880809151075564 1.0961609780437427 0.28081292638859734 0.11336747586049739 927.666495772405 2259306.0268291654 0.01741042691057804 0.02234514898739369 5.608224786844534e-09 8.251174587457642 0.10808006293618633 RAGQNQPAEPDASACTPES(ph)PQEELLSRPAPADVPR ddPTM_A549_MK2206_60min_R1 1 RAGQNQPAEPDASACTPESPQEELLSRPAPADVPR 35 2 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 RAGQNQPAEPDASACT(0.031)PES(0.965)PQEELLS(0.004)RPAPADVPR 98.735 2.1941e-10 4219900.0 556.73 649.21 685.81 662.33 807.56 714.55 475.94 519.48 946.57 733.5 1056.6 True False 650.6924132583214 682.2520159998896 783.0681704476838 824.6008797331235 688.7689937682634 790.1632067200974 562.4121373328533 593.1178808407784 732.1734063616822 567.8018405621254 794.2170593235044 0.8192878831041052 0.859024630597857 0.9859624157590912 1.0382563180341398 0.8672301679781858 0.9948957875484821 0.708134043119022 0.7467956950534184 0.9218807349534024 0.7149202272811489 1.0 9.633389539225748 -9.677100295905225 1.4440458547188024 0.9820927955111661 0.8845706919450719 0.0 0.12596806467280905 0.5220715335341571 2.2004409705593613 0.026071062866696415 0.01910462382847655 2.103292649572312e-10 9.677100295905225 -0.09752210356609425 RAHLS(ph)ENELEALEK ddPTM_A549_PD325901_60min_R1 1 RAHLSENELEALEK 14 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 RAHLS(1)ENELEALEK 122.44 6.6783e-07 9065100.0 1327.7 1725.7 1677.6 1395.5 1594.6 1509.2 1483.0 1460.3 1716.5 1343.9 1685.6 True False 1462.4871265989195 1871.1307953446778 1791.452024228314 1481.6968655895498 1482.600797071358 1496.9095755736657 1539.4363765287383 1431.1731709168114 1644.3614742895409 1259.0459246485905 1478.2818858987712 0.9893154617867426 1.2657469547542084 1.2118473758738784 1.0023101004776922 1.0029215748456264 1.0126009050456364 1.041368626114759 0.9681327929190457 1.112346359632078 0.8516954287666937 1.0 10.529705680406218 -6.264006886456952 24.99821025990482 1.0380225059452377 1.1666476352008592 0.30580891145624467 0.09197203176145385 181.16661318406167 1763916.0454770592 0.010402328584552386 0.02526455719562425 5.444940189211847e-07 6.264006886456952 0.12862512925562153 RAHT(ph)PTPGIYMGR ddPTM_A549_MK2206_60min_R1 13 RAHTPTPGIYMGR 13 1 Q13595;Q13595-3;Q13595-4;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RAHT(0.996)PT(0.004)PGIYMGR;RAHT(0.992)PT(0.008)PGIYMGR;RAHT(0.93)PT(0.068)PGIY(0.001)MGR;RAHT(0.981)PT(0.019)PGIYMGR;RAHT(0.999)PT(0.001)PGIYMGR;RAHT(0.966)PT(0.034)PGIYMGR;RAHT(0.958)PT(0.042)PGIYMGR;RAHT(0.998)PT(0.002)PGIYMGR;RAHT(0.999)PT(0.001)PGIYMGR;RAHT(0.994)PT(0.006)PGIYMGR;RAHT(1)PTPGIYMGR;RAHT(0.947)PT(0.053)PGIYMGR;RAHT(0.976)PT(0.024)PGIYMGR 166.48 1.2295e-19 1035448600.0 20134.609999999997 22742.670000000002 18950.63 16669.989999999998 25174.299999999996 18607.86 17322.83 18148.889999999996 27455.429999999997 29354.51 29936.38 True False 23532.839924047792 23900.174761202376 21638.11429248768 20754.138298344275 21471.193818193547 20576.931394302203 20470.163980656533 20721.550736144585 21236.818942312475 22723.305803407395 22502.35064394374 1.0457947392434486 1.0621190265575584 0.9615935079347517 0.9223097900632005 0.954175595160423 0.9144347503908555 0.9096900277023214 0.9208616052617401 0.9437600221569798 1.0098192034672218 1.0 14.457788095890654 -5.775183618257445 9.314076864353297 0.9559417608995179 1.0540431392596616 0.6085602191967943 0.032169144978980206 0.09980650501906925 59.63907883198385 0.00510675428283261 0.016716265194660712 1.6780943754147375e-06 5.775183618257445 0.09810137836014377 RAHT(ph)PTPGIYMGR ddPTM_A549_PD325901_60min_R1 14 RAHTPTPGIYMGR 13 1 Q13595;Q13595-3;Q13595-4;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RAHT(0.986)PT(0.014)PGIYMGR;RAHT(0.996)PT(0.004)PGIYMGR;RAHT(0.989)PT(0.011)PGIYMGR;RAHT(0.607)PT(0.392)PGIY(0.001)MGR;RAHT(0.99)PT(0.009)PGIYMGR;RAHT(0.938)PT(0.062)PGIYMGR;RAHT(0.988)PT(0.012)PGIYMGR;RAHT(0.949)PT(0.049)PGIY(0.001)MGR;RAHT(0.99)PT(0.01)PGIYMGR;RAHT(0.992)PT(0.008)PGIYMGR;RAHT(0.998)PT(0.002)PGIYMGR;RAHT(1)PTPGIYMGR;RAHT(0.999)PT(0.001)PGIYMGR;RAHT(0.999)PT(0.001)PGIYMGR 200.58 9.4206e-31 1546645000.0 30550.089999999997 29960.690000000002 31456.12 33311.16 33664.03999999999 32183.659999999996 29532.280000000002 31109.02 33009.96 34838.079999999994 35859.869999999995 True False 33651.51264701241 32485.58249335072 33590.92146421598 35368.71469806666 31299.593965033288 31921.566943418475 30656.14707608371 30488.52619154592 31622.666176428087 32638.397683296054 31449.333324445164 1.070023084427533 1.0329497976384794 1.0680964558986752 1.124625260993212 0.9952387111718045 1.0150156956938177 0.9747789169271541 0.9694490460898763 1.0055114952738344 1.0378088891927844 1.0 14.940741814151274 -6.791933744052894 24.958892359617263 0.9984980162953399 1.0705807255865654 0.6468218217141442 0.026337098508007924 83.5147981734238 68354.61248014968 0.003405448872390822 0.006436193101694781 1.6146048620847726e-07 6.791933744052894 0.07208270929122551 RAHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A549_MK2206_60min_R1 6 RAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 34 2 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RAHT(0.739)PT(0.234)PGIY(0.008)MGRPT(0.009)HS(0.009)GGGGGGGGGGGGGGGGR;RAHT(0.857)PT(0.052)PGIY(0.031)MGRPT(0.052)HS(0.008)GGGGGGGGGGGGGGGGR;RAHT(0.918)PT(0.081)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.709)PT(0.185)PGIY(0.034)MGRPT(0.036)HS(0.036)GGGGGGGGGGGGGGGGR;RAHT(0.941)PT(0.059)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.987)PT(0.013)PGIYMGRPTHSGGGGGGGGGGGGGGGGR 200.9 1.3935999999999998e-88 382810000.0 3319.1099999999997 2959.14 2820.4399999999996 2206.2000000000003 3664.19 3252.5199999999995 2543.5899999999997 2713.39 4409.62 5228.4 5079.54 True False 3879.2946235514964 3109.747586491138 3220.4208026384313 2746.7190990400813 3125.1925049231427 3596.699507551958 3005.727378237743 3098.021341908369 3410.8481107161633 4047.3008087184985 3818.1500298278547 1.0160141935874631 0.8144644820652436 0.8434505657137908 0.7193848009068203 0.8185096134276435 0.9420005708141644 0.7872208673720607 0.8113932972005415 0.8933247997250503 1.060016179851627 1.0 11.898658077565292 -9.781578368309292 0.7389657181795277 0.9908310045805737 0.8393479500415454 0.4218983950985963 0.0786794752461873 0.455882476018483 0.5222114007256632 0.03167191902477658 0.016258426520595268 1.6535663722908847e-10 9.781578368309292 -0.15148305453902833 RAHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_A549_PD325901_60min_R1 8 RAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 34 2 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RAHT(0.927)PT(0.067)PGIYMGRPT(0.005)HSGGGGGGGGGGGGGGGGR;RAHT(0.955)PT(0.014)PGIY(0.01)MGRPT(0.01)HS(0.01)GGGGGGGGGGGGGGGGR;RAHT(0.978)PT(0.022)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.936)PT(0.052)PGIY(0.002)MGRPT(0.005)HS(0.005)GGGGGGGGGGGGGGGGR;RAHT(0.958)PT(0.042)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.684)PT(0.312)PGIYMGRPT(0.004)HS(0.001)GGGGGGGGGGGGGGGGR;RAHT(0.952)PT(0.048)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.967)PT(0.033)PGIYMGRPTHSGGGGGGGGGGGGGGGGR 168.48 9.7737e-63 314345000.0 8481.99 5826.959999999999 7025.0 8542.68 6323.49 9422.91 5967.0 6601.18 8227.9 7546.079999999999 11008.279999999999 True False 9343.07538068898 6318.018368917899 7501.758744756736 9070.341941766064 5879.349877256215 9346.172945115848 6194.077450267687 6469.514286374469 7882.109976292987 7069.619220977927 9654.331347236428 0.9677599664489923 0.6544231953180729 0.7770355579212774 0.9395101137027442 0.608985714887359 0.968080813570917 0.6415853390033847 0.6701152108505557 0.8164325102172153 0.7322743509317836 1.0 13.236960627169836 -10.150059917947646 0.8603373060214135 0.9873952610290317 0.7776962677178036 0.0 0.14699890439121474 0.48450663534370536 0.709252945004743 0.05419827027691295 0.02296630088865596 7.07848118550984e-11 10.150059917947646 -0.2096989933112281 RAIS(ph)ETEENSDELSGER ddPTM_A549_MK2206_60min_R1 4 RAISETEENSDELSGER 17 1 A7UKX8;F5GWH7;J3KN53;E7EPE2;Q00987-8;Q00987-9;Q00987;Q00987-11 A7UKX8 mdm2;MDM2 E3 ubiquitin-protein ligase Mdm2 1 RAIS(0.997)ET(0.003)EENSDELSGER;RAIS(1)ETEENSDELSGER;RAIS(0.984)ET(0.011)EENS(0.005)DELSGER;RAIS(0.999)ET(0.001)EENSDELSGER 173.65 2.4022999999999997e-30 37774200.0 2718.7700000000004 2983.49 2866.05 1827.6999999999998 5005.7300000000005 3926.5899999999997 3737.96 3076.61 5087.24 4473.17 4666.66 True False 3177.6319084553106 3135.33689748388 3272.498986470865 2275.4865820485697 4269.393748050436 4342.099147540504 4417.098947062048 3512.7288892229667 3934.98826265295 3462.6777902485114 3507.799528736159 0.9058761432698504 0.8938187236183148 0.9329207554942367 0.6486934510959397 1.2171145223879642 1.237841305345331 1.2592221735811409 1.0014052571837204 1.1217825392863043 0.9871367396802448 1.0 11.776350584564893 -6.77396591152277 24.998750176117326 1.093025077034798 0.8550475850599887 0.5582808820747404 0.11513303769508221 149.30046958026315 297953.70918526925 0.017463014822257192 0.03316289705467435 1.6828061420661915e-07 6.77396591152277 -0.23797749197480933 RAIS(ph)ETEENSDELSGER ddPTM_A549_PD325901_60min_R1 4 RAISETEENSDELSGER 17 1 A7UKX8;F5GWH7;J3KN53;E7EPE2;Q00987-8;Q00987-9;Q00987;Q00987-11 A7UKX8 mdm2;MDM2 E3 ubiquitin-protein ligase Mdm2 1 RAIS(0.926)ET(0.074)EENSDELSGER;RAIS(0.992)ET(0.008)EENSDELSGER;RAIS(0.999)ET(0.001)EENSDELSGER;RAIS(0.65)ET(0.348)EENS(0.002)DELSGER 195.38 2.1505e-48 56034900.0 6067.58 6016.5199999999995 5269.76 5533.98 5618.65 4816.54 5337.92 4520.679999999999 6102.13 6831.62 6457.14 True False 6683.556254883688 6523.553255378775 5627.39760324118 5875.80137601953 5224.015407290223 4777.315695158748 5541.0574666219045 4430.511490995147 5845.678696828688 6400.2703473084375 5662.952715182959 1.180224626803679 1.1519702853757647 0.9937214535013772 1.0375861624741987 0.9224896745621944 0.8436086146985252 0.9784749662072507 0.7823677353188011 1.0322669093026013 1.130200209892033 1.0 12.467338768247805 -5.744595135262268 3.050511186355844 0.9792334211217741 1.1794670722753928 0.4121816846228781 0.09043907016971565 0.18144553795654633 3.3594860453050543 0.011821496585927493 0.05340962223092752 1.8005486683824545e-06 5.744595135262268 0.20023365115361869 RAIS(ph)PTSSSR ddPTM_A549_MK2206_60min_R1 2 RAISPTSSSR 10 1 B1AM27;O14795;O14795-2;A0A0U1RRL2 B1AM27 UNC13B Protein unc-13 homolog B 1 RAIS(0.987)PT(0.009)S(0.003)S(0.001)S(0.001)R;RAIS(0.983)PT(0.01)S(0.003)S(0.001)S(0.004)R 65.295 0.0023557 9920700.0 1438.1 1242.31 1054.53 923.4300000000001 1087.28 836.8299999999999 930.81 974.65 1390.26 1704.5300000000002 1910.01 True False 1680.816121830675 1305.5382726649661 1204.0782108487708 1149.6703914543475 927.3425523111072 925.3827951572025 1099.9261284002034 1112.8096222404417 1075.3683297890193 1319.4754891525013 1435.7018034057228 1.1707278752757018 0.9093380460817231 0.8386687318999653 0.8007724088157713 0.6459158511268126 0.6445508342763386 0.7661243621697739 0.7750980179872121 0.7490192790996482 0.9190456444524111 1.0 10.487540415841261 -5.239579373122469 2.120568205168767 0.8252953988146517 1.2778170439881145 0.5163822578966426 0.10301079181202503 0.6283439065641684 2.9548872206689567 0.01889279847579882 0.5504874702008841 5.7599753768912315e-06 5.239579373122469 0.4525216451734627 RAIT(ph)PPVASPVGR ddPTM_A549_PD325901_60min_R1 1 RAITPPVASPVGR 13 1 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 RAIT(1)PPVASPVGR 75.574 0.00065416 6173100.0 963.08 951.06 903.82 938.14 711.41 758.6 682.38 801.22 995.6 864.67 899.36 True False 1060.8511726179756 1031.2091639453597 965.1586603111798 996.0867771294743 661.4430158312647 752.4222131130282 708.3483443126642 785.2390385550691 953.7583942922621 810.0745886344946 788.7444215127666 1.3449872274003838 1.3074059680416625 1.2236646421664203 1.2628764780599486 0.8386024646141457 0.9539493308490543 0.8980708135521169 0.9955557429477924 1.209210953863874 1.0270431923699923 1.0 9.623414086276469 -6.567665567128583 21.813566475698565 1.051358511807635 1.2851768088887408 0.625405176178575 0.10329403966883768 25.913624375046243 12621.094635995816 0.01849930056119438 0.03850945009954285 2.7060413765964906e-07 6.567665567128583 0.2338182970811058 RAKS(ph)PTPDGS(ph)ER ddPTM_A549_PD325901_60min_R1 1 RAKSPTPDGSER 12 2 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 2 RAKS(0.989)PT(0.313)PDGS(0.698)ER 57.498999999999995 0.011670999999999999 44278000.0 3069.4 3051.8 2892.0 3623.0 3346.8 3467.0 3653.0 3502.3 3828.9 3508.3 3772.2 True False 3381.003228427145 3308.9858962930307 3088.268511008752 3846.784481570005 3111.732313833202 3438.765901480186 3792.016913998299 3432.4438789988017 3667.9846483584197 3286.7853392697743 3308.24331394598 1.0219935196950127 1.000224464247814 0.9335070664210462 1.1627876539049566 0.9405995927553512 1.0394537448270462 1.146232774963365 1.0375427540438913 1.1087408936627912 0.9935137858253204 1.0 11.691849630088527 -7.517754776202911 24.94760772573016 1.0593889530661422 1.0126954693001915 0.0891408193095361 0.0691241093398738 433.81423081358236 2112158.3590783714 0.010453053716597702 0.01577010447562643 3.0356047505208105e-08 7.517754776202911 -0.04669348376595073 RAKS(ph)PTPDGSER ddPTM_A549_MK2206_60min_R1 2 RAKSPTPDGSER 12 2 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 RAKS(0.986)PT(0.013)PDGS(0.001)ER;RAKS(0.99)PT(0.01)PDGSER 46.746 0.012114 18210100.0 1137.77 888.2 1013.4200000000001 792.72 1515.02 873.1600000000001 1045.8000000000002 933.8399999999999 1644.67 1714.27 1519.78 True False 1329.7977601942052 933.405586191066 1157.1381946823337 986.9364355865528 1292.1625649348584 965.5572116433008 1235.8083229455353 1066.2146797650573 1272.1548709983067 1327.0152163877783 1142.376682205826 1.1640624155829986 0.8170733880778661 1.0129217557627355 0.8639325810474946 1.1311177697008044 0.845217892384583 1.0817870691822082 0.9333302196840129 1.113603674526944 1.16162666575567 1.0 10.157822721654565 -8.753822250574107 24.998730804297495 1.0536461805912036 0.9766793271825563 0.13112431101622268 0.11552432274055023 297.3691846017303 975937.6333140103 0.01725727561565222 0.019388361777036216 1.7626973411649169e-09 8.753822250574107 -0.07696685340864728 RAKS(ph)PTPDGSER ddPTM_A549_PD325901_60min_R1 2 RAKSPTPDGSER 12 2 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 RAKS(0.75)PT(0.25)PDGSER;RAKS(0.822)PT(0.178)PDGSER 68.044 0.00090674 12522200.0 2139.74 1857.92 1992.3200000000002 1950.17 2374.85 2329.0 2158.3 2349.6000000000004 2263.8 2414.13 2302.1 True False 2356.964829606665 2014.4934387708076 2127.5308159934166 2070.627571742582 2208.0487287877304 2310.0333961774895 2240.435287567077 2302.7353847744585 2168.66035857656 2261.701419801996 2018.9562942142632 1.1674174603784317 0.9977895234997187 1.0537775493656283 1.0255930639392212 1.0936585081684782 1.1441720669225817 1.1096997463429534 1.1405573223023318 1.0741492348255903 1.1202329769511947 1.0 10.979393964621803 -10.186780777481868 0.9314702896719391 1.0059908875397396 1.08674092506081 0.0 0.0596256868771725 0.4950516316322898 0.8498195131138068 0.021944988635277524 0.0095731552450005 6.504579446753776e-11 10.186780777481868 0.08075003752107035 RALLETAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RALLETASPR 10 1 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 RALLET(0.001)AS(0.999)PR;RALLET(0.004)AS(0.996)PR 99.844 0.00019451 28088000.0 1508.88 1928.9 1709.9699999999998 1379.63 2226.4300000000003 1697.52 1637.8600000000001 1559.12 3163.2 3005.1 2916.7 True False 1763.542055425818 2027.0727710019667 1952.4694586261858 1717.6394119339436 1898.9250963339882 1877.1504396774203 1935.437961196761 1780.1300346047474 2446.740250592426 2326.2458228674072 2192.402893175151 0.8043877614445972 0.9245895347575716 0.8905614313428125 0.7834506227303731 0.8661387476933434 0.8562068794567381 0.8827930154725165 0.8119538795292645 1.1160084937896295 1.0610485098833353 1.0 11.09829722829575 -8.758343331958567 24.999995063152834 1.0547817926854948 0.8554661853015977 0.7991872244167693 0.0460716430009959 28.771358896744104 232323.03577145343 0.009274476691371937 0.010299206893319302 1.7444425367851873e-09 8.758343331958567 -0.1993156073838971 RALLETAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RALLETASPR 10 1 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2 Q96BT3 CENPT Centromere protein T 1 RALLETAS(1)PR;RALLET(0.001)AS(0.999)PR 113.99 4.144e-05 33229000.0 1943.8899999999999 1830.58 1974.91 1983.05 2158.3 2308.9 2007.3600000000001 2097.8 2062.72 1952.6399999999999 2279.35 True False 2141.2322817838162 1984.8494010210688 2108.939268698581 2105.538494666683 2006.7084537307871 2290.097083913355 2083.7511832695413 2055.9577333077364 1976.0310517020225 1829.349977160372 1999.004399990131 1.0711493590481278 0.9929189755814783 1.0549948107712983 1.0532935768811105 1.0038539453643494 1.1456188310164106 1.0423944956198339 1.0284908494037763 0.9885076049416289 0.9151305405677963 1.0 10.965065932250859 -8.547174006540757 2.988635374598781 0.9945885744784374 1.0513256089082472 0.3717446159066148 0.044168089496092584 0.2200507743825999 4.0225422340103085 0.0061841628734549065 0.007194903452388868 2.836782201750413e-09 8.547174006540757 0.05673703442980982 RALLSLRS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RALLSLRSPK 10 2 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 RALLS(0.006)LRS(0.994)PK 59.227 0.0019756 7810400.0 559.56 1113.9 1094.2 681.3 1304.1 917.2 812.33 864.11 1369.9 1842.5 1430.2 True False 654.0000480714642 1170.5927521484214 1249.3740133620909 848.2185305847189 1112.2686175308231 1014.257495211915 959.9198460301643 986.6002387258891 1059.6198372807803 1426.2779703281753 1075.041868488052 0.6083484441319997 1.088881081250122 1.1621631212551946 0.7890097636640522 1.0346281853144261 0.9434585990947268 0.8929139172785928 0.9177319206306375 0.9856544831793749 1.3267185326782713 1.0 10.07017713264783 -5.251407070825817 24.871772619819396 0.9838757181370262 0.6083482237442037 0.3947793763976889 0.13995065303033755 689.2477129102142 1708724.3211632785 0.012113554133048937 0.226377663134862 5.605223436081295e-06 5.251407070825817 -0.3755274943928225 RALLSLRS(ph)PK ddPTM_A549_PD325901_60min_R1 2 RALLSLRSPK 10 2 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 RALLS(0.008)LRS(0.992)PK;RALLS(0.002)LRS(0.998)PK 70.96300000000001 0.0005871 37112000.0 2506.5 2540.51 2503.16 2864.1000000000004 2593.44 3833.1 3231.1000000000004 3018.6000000000004 2936.1000000000004 3117.7 3363.6 True False 2760.958034812224 2754.6076936206196 2673.039490323883 3041.008952156956 2411.2857212822933 3801.8845044602544 3354.0612786257634 2958.3916549541123 2812.7059275627857 2920.847889929989 2949.898523617172 0.9359501734407905 0.9337974413583942 0.9061462517857042 1.0308859534693635 0.8174131082738295 1.288818742076041 1.1370090366745924 1.0028791266102692 0.9534924354326059 0.9901519888041569 1.0 11.526449611342562 RALPNNTSSS(ph)PQPK ddPTM_A549_MK2206_60min_R1 2 RALPNNTSSSPQPK 14 1 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 RALPNNTS(0.001)S(0.043)S(0.956)PQPK;RALPNNT(0.001)S(0.013)S(0.48)S(0.506)PQPK 85.493 7.1444e-05 7886800.0 1988.28 2436.5 1809.25 1977.96 2147.2 1855.33 2032.45 1951.62 2737.8999999999996 2837.5 3806.5 True False 2323.8530552211214 2560.5074428670705 2065.8288554883593 2462.560288793998 1831.3497243786408 2051.65978913162 2401.7198565410713 2228.2681115855853 2117.7700215278833 2196.506779270663 2861.240995944464 0.8121836149121872 0.8948940150432436 0.7220044933008001 0.8606616123159294 0.6400543424948839 0.7170524230708465 0.8393979605161817 0.7787768016549262 0.7401578631543516 0.7676762573946067 1.0 11.482425302424977 -10.77394544562375 0.8768068264895684 1.0090879930809908 0.7763230257970083 0.0 0.09685646037875766 0.3699248795045772 0.47238081733163345 0.05814947233627393 0.01260116650308842 1.6828854452890206e-11 10.77394544562375 -0.23276496728398255 RALPNNTSSS(ph)PQPK ddPTM_A549_PD325901_60min_R1 2 RALPNNTSSSPQPK 14 1 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 RALPNNT(0.004)S(0.025)S(0.171)S(0.8)PQPK;RALPNNTSS(0.015)S(0.984)PQPK 112.5 2.9088e-06 14854800.0 3129.1 2649.0 3108.8 3492.3 3929.6000000000004 3612.7 3140.7 3471.3999999999996 4168.5 4006.9 3862.1000000000004 True False 3446.763928478331 2872.2405266663072 3319.781862733063 3708.01143941124 3653.5984523840525 3583.279368986868 3260.221057156986 3402.1602037393836 3993.312441349233 3753.9036501781693 3387.0861838690344 1.0176191987359255 0.8479974735645421 0.9801291382969505 1.0947496574107294 1.0786848205352082 1.0579238833815927 0.9625444645263995 1.0044504388291444 1.178981645157819 1.1082988286675726 1.0 11.725828981106964 -6.083834809696253 4.53954832164729 1.069719327420706 0.928470810507033 0.36103040958116717 0.06711164658108643 0.18433064732191548 6.721350785747194 0.011301434727290631 0.03197817462003733 8.244516477099664e-07 6.083834809696253 -0.14124851691367302 RALS(ph)PLPTR ddPTM_A549_MK2206_60min_R1 2 RALSPLPTR 9 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 RALS(1)PLPTR;RALS(1)PLPTR 112.84 0.00010964 23979000.0 1134.6599999999999 886.16 787.72 1022.68 1022.4300000000001 943.55 1091.22 899.32 1095.39 1617.51 1355.94 True False 1326.1628682264052 931.2617589046098 899.4305408568687 1273.236645909849 872.0319014048308 1043.3958347222008 1289.4805490195324 1026.8013640519916 847.2859139783881 1252.1133675905162 1019.2226759597884 1.301151259196206 0.913698037602679 0.8824671605838116 1.2492232325098722 0.8555852631356048 1.0237172497557012 1.2651607734347607 1.0074357530213567 0.8313059883410759 1.2284983420442621 1.0 9.99325356522099 -8.532103285492312 24.109043182349076 0.920287966310253 1.0596534387177767 0.0 0.17616877014341423 183.60194445175554 479854.9197478047 0.025089772760190653 0.028470988819346312 2.936951092513447e-09 8.532103285492312 0.13936547240752373 RALS(ph)PLPTR ddPTM_A549_PD325901_60min_R1 2 RALSPLPTR 9 1 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 RALS(1)PLPTR;RALS(1)PLPTR 88.734 0.00046434 30984000.0 1485.5 1419.8600000000001 1492.8600000000001 1787.85 1509.79 1609.27 1652.1 1479.24 1827.38 1730.77 1684.79 True False 1636.3068664326995 1539.5165851991028 1594.1744568964482 1898.2814339980484 1403.7475588927418 1596.1646386717673 1714.971569563808 1449.7353977586697 1750.581573485129 1621.488886824944 1477.5715107637575 1.1074298973096006 1.041923571200507 1.0789152641907793 1.2847306679707338 0.9500369685438399 1.080262191741034 1.1606690823900214 0.9811609030071924 1.184769441433161 1.0974012932793997 1.0 10.529012239584462 RALS(ph)SAGPIPIRPPIVPVK ddPTM_A549_MK2206_60min_R1 2 RALSSAGPIPIRPPIVPVK 19 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RALS(0.937)S(0.063)AGPIPIRPPIVPVK;RALS(0.929)S(0.071)AGPIPIRPPIVPVK 73.672 0.00010733 8670500.0 2276.33 2311.4700000000003 2823.12 2483.81 3552.2 2551.71 2029.6499999999999 2435.13 3613.6 3731.6 3790.1 True False 2660.5188530747637 2429.1139499133797 3223.480866937293 3092.3435615024687 3029.6760855708853 2821.7302585119874 2398.4111327848577 2780.3171347728585 2795.125369733432 2888.6289682912443 2848.9135685614365 0.9338713825629316 0.8526457161492493 1.1314772418894388 1.0854466051997331 1.0634496318190254 0.9904583591620945 0.8418686896127703 0.9759218971942291 0.9811197505527818 1.0139405421659957 1.0 11.476196137949234 -7.512033837508867 24.694607229887644 0.976560358344632 1.0162074674327102 0.06852541873452989 0.08199468653056907 1309.8132286285072 2982538.5837680697 0.01290970497770245 0.019873580806821455 3.075857153859057e-08 7.512033837508867 0.039647109088078225 RALS(ph)SAGPIPIRPPIVPVK ddPTM_A549_PD325901_60min_R1 3 RALSSAGPIPIRPPIVPVK 19 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RALS(0.956)S(0.044)AGPIPIRPPIVPVK;RALS(0.944)S(0.056)AGPIPIRPPIVPVK;RALS(0.949)S(0.051)AGPIPIRPPIVPVK 125.04 2.3999000000000002e-15 28830400.0 4147.63 4346.120000000001 4617.66 4383.0 5300.9 5445.3 4430.13 4818.7 5053.67 5508.0 5220.200000000001 True False 4568.694344276176 4712.382785109468 4931.042175845323 4653.727955484769 4928.58307111223 5400.955282183459 4598.721021410154 4722.587248302978 4841.281824510821 5160.223939998837 4578.1484935742565 0.9979349404434238 1.0293206504165644 1.0770821834998094 1.0165087397266808 1.0765450439254716 1.1797247926239325 1.004493634897333 1.0315496002218913 1.0574759275077883 1.1271421071731427 1.0 12.160548542546692 -10.720717580863866 0.6650204883072627 0.9940714509091194 1.0548076978019356 0.0 0.06085883700184922 1.5541254426567446 1.0263152740710182 0.05462102308153107 0.00974284693036065 1.9023149419521835e-11 10.720717580863866 0.060736246892816204 RALS(ph)SDSILSPAPDAR ddPTM_A549_MK2206_60min_R1 8 RALSSDSILSPAPDAR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RALS(0.944)S(0.045)DS(0.011)ILSPAPDAR;RALS(0.702)S(0.143)DS(0.143)ILS(0.013)PAPDAR;RALS(0.945)S(0.045)DS(0.01)ILSPAPDAR;RALS(0.916)S(0.066)DS(0.018)ILSPAPDAR;RALS(0.69)S(0.232)DS(0.078)ILSPAPDAR;RALS(0.922)S(0.062)DS(0.016)ILSPAPDAR;RALS(0.81)S(0.185)DS(0.005)ILSPAPDAR;RALS(0.966)S(0.034)DSILSPAPDAR 264.63 2.3468999999999997e-91 408671300.0 14967.25 17032.449999999997 14843.61 14575.46 20645.27 16996.96 15078.89 16618.51 24637.219999999998 23878.5 24861.13 True False 17493.355885870355 17899.328953523996 16948.657099690798 18146.448354317265 17608.378131623806 18795.56702553109 17818.52912868637 18974.234684552404 19056.929007555857 18484.33026566152 18687.425288717914 0.9361030540912209 0.9578274522563731 0.9069551764267464 0.971051285768765 0.9422581152607707 1.0057868719281764 0.9535036985241557 1.0153477213368525 1.0197728533026442 0.9891319954504911 1.0 14.189780191057563 -7.426816986525211 0.8583499828462713 1.0095805463899183 0.9372491820853134 0.5836058250626529 0.022459133205381843 0.247649968062643 0.36298404645891863 0.0037358069903041737 0.008251191808503694 3.7426827322959034e-08 7.426816986525211 -0.07233136430460496 RALS(ph)SDSILSPAPDAR ddPTM_A549_PD325901_60min_R1 3 RALSSDSILSPAPDAR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RALS(0.733)S(0.192)DS(0.076)ILSPAPDAR;RALS(0.972)S(0.028)DSILSPAPDAR;RALS(0.901)S(0.098)DS(0.001)ILSPAPDAR 296.46 1.5690999999999996e-124 436641000.0 13653.2 13284.5 13896.4 13925.8 15017.7 14471.3 14227.099999999999 13849.5 17089.4 16457.1 17432.2 True False 15039.262813045389 14404.031436956797 14839.493269841645 14785.96503821351 13962.908560252445 14353.450530744216 14768.520075867847 13573.260857777435 16371.191947989344 15417.995897413752 15288.149911820454 0.9837202604493934 0.9421696882904009 0.9706533070013974 0.9671520179679383 0.9133157799202791 0.9388611842199722 0.9660109405683653 0.8878288698152348 1.070841929364619 1.00849324387465 1.0 13.900126209757909 -8.770337418334625 24.999999482527706 1.0334531335169457 0.9469099668232441 0.5686245037754227 0.030954187541400828 98.39326228677812 276445.6919905461 0.0059750948169964594 0.006406519259937272 1.69692474092225e-09 8.770337418334625 -0.08654316669370155 RALSS(ph)DSILSPAPDAR ddPTM_A549_PD325901_60min_R1 1 RALSSDSILSPAPDAR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RALS(0.318)S(0.677)DS(0.005)ILSPAPDAR 155.11 1.4872e-20 333070000.0 1781.9 1780.1 1799.0 1913.5 1833.6 1924.9 1756.6 1860.6 1982.9 1753.2 1960.0 True False 1962.7971762345512 1930.1152742614922 1921.090958265819 2031.6925491261952 1704.8142615765976 1909.224252598562 1823.4483742484022 1823.4888733875364 1899.5656087204964 1642.502652797016 1718.932425463688 1.141869888052801 1.1228569812689622 1.1176070273661851 1.1819502145805056 0.9917866673070164 1.110703494980928 1.0608028257751438 1.0608263864099508 1.1050845167506116 0.9555364879186249 1.0 10.747297115478846 -14.999999999999998 0.12697476061219576 0.675254441876826 1.1465822492035076 0.5188160228577707 0.04647022993403393 53.627545633674565 0.468497557157878 4.505401470091057 0.14007741066066362 1.000000000000004e-15 14.999999999999998 0.47132780732668156 RALVEFESNPEETREPGS(ph)PPSVQR ddPTM_A549_MK2206_60min_R1 3 RALVEFESNPEETREPGSPPSVQR 24 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RALVEFESNPEETREPGS(1)PPSVQR;RALVEFESNPEET(0.006)REPGS(0.994)PPSVQR;RALVEFESNPEETREPGS(1)PPSVQR 273.43 7.956199999999998e-126 573072000.0 13166.9 14738.6 13342.5 11763.0 18553.0 13222.599999999999 12854.3 12201.599999999999 20392.2 20263.6 22475.3 True False 15389.150820201876 15488.731786349523 15234.667129668873 14644.935528061129 15823.878277010483 14621.80675554848 15189.759921245726 13931.214165832831 15773.399259651887 15686.038686318603 16894.062723276118 0.9109206632102282 0.9168150988932713 0.9017764038888656 0.8668687791648713 0.9366532216794029 0.8654997317728083 0.8991182387595699 0.8246219038028569 0.9336652478459065 0.9284941664568857 1.0 14.044228692052306 -9.60129121779114 1.0842392437978599 0.987063778368719 0.8927299594182962 0.33375585409097086 0.03567790150789144 0.20379552354924715 0.4963380843876158 0.00884509163085007 0.0062065602732495695 2.5044293353883643e-10 9.60129121779114 -0.0943338189504227 RALVEFESNPEETREPGS(ph)PPSVQR ddPTM_A549_PD325901_60min_R1 4 RALVEFESNPEETREPGSPPSVQR 24 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RALVEFESNPEETREPGS(1)PPSVQR;RALVEFESNPEETREPGS(0.999)PPSVQR;RALVEFESNPEETREPGS(1)PPSVQR;RALVEFESNPEETREPGS(0.998)PPS(0.001)VQR 293.18 1.0547999999999996e-157 1122454000.0 14514.1 14864.7 16170.9 15962.000000000002 17093.600000000002 18014.7 16573.399999999998 18023.7 16409.2 17582.0 18393.2 True False 15987.560747284297 16117.400436669192 17268.354517521253 16947.936487667797 15893.004505718663 17867.99425595474 17204.10980631246 17664.20316418087 15719.578388530119 16471.869519437107 16130.95300410138 0.9911107386661764 0.999159840870608 1.0705104970010564 1.0506469446261912 0.9852489497475929 1.1076837339623833 1.0665277991906754 1.0950501907537424 0.9744978107947703 1.0211343071453403 1.0 13.977544053856791 -8.786388302250026 24.981977959053946 0.9879572923017318 1.0459198081713146 0.204676991041584 0.03997579183269754 197.77376612971014 198034.8714893128 0.006852647185929567 0.007296798717654173 1.6353536995090876e-09 8.786388302250026 0.05796251586958279 RALYESVFGSGEICGPT(ph)SPKR ddPTM_A549_PD325901_60min_R1 1 RALYESVFGSGEICGPTSPKR 21 2 A0A2U3U043 A0A2U3U043 1 RALYESVFGSGEICGPT(0.5)S(0.5)PKR 80.082 5.5945e-05 5468200.0 2043.4 1890.3 1813.1 2141.9 2141.0 2984.2 2186.2 2588.7 2340.5 1891.7 2453.4 True False 2250.8444637284247 2049.602215008427 1936.1478690560054 2274.2002983921575 1990.6235460490277 2959.897664608357 2269.3970373345433 2537.066347704135 2242.1369243079935 1772.257739160458 2151.6473533839844 1.046102866340262 0.9525734836542489 0.8998444220010988 1.0569577281404543 0.9251625471610355 1.3756425559017391 1.0547253636918563 1.179127399159526 1.0420559487974144 0.8236748165879298 1.0 11.071225929836434 RANNTFYGLSAGVFTK ddPTM_A549_MK2206_60min_R1 2 RANNTFYGLSAGVFTK 16 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 125.45 2.5743e-08 4439800.0 2418.81 2378.03 2436.2 2591.36 3445.0 2461.2 2377.7 2866.3 3703.9 3418.9 3810.5 False True 2827.0459937732094 2499.061569612633 2781.6897928648564 3226.2433163305723 2938.245063563904 2721.6425503876644 2809.6973125526856 3272.606802675603 2864.9725639129015 2646.5681154708263 2864.2476855500795 0.9870117057388054 0.8725019076458422 0.97117641288436 1.1263841924728557 1.0258348390703556 0.9502120099871783 0.9809547291344263 1.1425711607224702 1.0002530781002212 0.9240011360828079 1.0 11.483940539577144 -6.000234306497156 24.998729730610574 1.0151648196800498 0.9277773744602575 0.212941204556507 0.06703622084138412 8.7495942482366 933988.4200513768 0.008191289173496055 0.025085957122588882 9.994606348621564e-07 6.000234306497156 -0.08738744521979225 RANNTFYGLSAGVFTK ddPTM_A549_PD325901_60min_R1 2 RANNTFYGLSAGVFTK 16 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 132.51 3.6954e-10 8249200.0 4131.5 4111.4 4209.7 5099.1 5474.3 5860.0 4159.8 4537.8 5920.6 4420.5 4596.299999999999 False True 4550.926838550451 4457.882106959553 4495.395556982557 5414.059826103671 5089.80405330976 5812.278102876808 4318.1034653299 4447.290019164767 5671.777771441108 4141.388875592752 4030.984238346299 1.12898651283674 1.1059041274714554 1.1152104030123375 1.3431111376225016 1.2626702939919803 1.4419004786933327 1.0712280698724317 1.1032764595947058 1.407045385463462 1.027389002466491 1.0 11.97691642674364 RAPFDLFENK ddPTM_A549_MK2206_60min_R1 2 RAPFDLFENK 10 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 106.29 0.00029969999999999997 12123100.0 1508.9 2275.3999999999996 2446.6 1885.51 2017.66 2411.9 2077.58 1611.5700000000002 2978.6 2801.8 2431.4 False True 1763.5654309368656 2391.208140980803 2793.5646692484843 2347.4600346437596 1720.8648867780403 2667.125657110356 2455.049393368889 1840.0149827261357 2303.9518558468017 2168.8714340653914 1827.6162767737733 0.9649538873937069 1.3083753801984728 1.5285291035927222 1.2844381309558308 0.9415898231196663 1.459346631459498 1.3433068114838096 1.0067840859757768 1.2606321606600521 1.186721447838068 1.0 10.83574748103866 -11.349579943497949 0.40403771805454647 0.8584357899288012 1.257107315739616 0.03605178827472044 0.1911972287701766 4.523441518178894 0.6581421154196488 0.8121018680913807 0.05159287024353038 4.471158406017643e-12 11.349579943497949 0.3986715258108148 RAPFDLFENK ddPTM_A549_PD325901_60min_R1 2 RAPFDLFENK 10 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 100.88 0.00044433 25273000.0 2673.6 3343.8999999999996 3934.7 3880.0 4595.4 4022.4 3369.1 4170.6 4159.3 3927.9 4343.3 False True 2945.021903799707 3625.7021884180717 4201.732403273214 4119.658787880657 4272.634957269357 3989.6429080224716 3497.312944142258 4087.414111227593 3984.4990853553695 3679.891723660394 3809.101634447162 0.7731539314064892 0.9518523096442114 1.1030769999086771 1.0815302880408881 1.121690983152113 1.0473973369317862 0.9181463977003712 1.0730651223016852 1.0460469338287068 0.9660786392207881 1.0 11.895235067064975 -5.355449863255008 3.102774885435282 1.0350259338387064 0.7574250551038583 0.6456576042166517 0.05754618267071139 0.1341728709075189 2.0286121162983526 0.0076711137899704894 0.07898181341715059 4.411132841177397e-06 5.355449863255008 -0.2776008787348482 RAPFDLFENKK ddPTM_A549_MK2206_60min_R1 2 RAPFDLFENKK 11 2 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 70.488 0.0010037000000000002 4340100.0 2350.7 2366.0 2393.5 2270.5 2524.5 2401.1 2188.1000000000004 2080.5699999999997 2638.8 2763.3999999999996 2803.3999999999996 False True 2747.440690902835 2486.419293996917 2732.9342907897676 2826.7726019266197 2153.1493941849285 2655.1828082788147 2585.6494467748366 2375.4971689783956 2041.116013297702 2139.146020735347 2107.238410096074 1.303811034261459 1.1799420901233266 1.2969269531610175 1.3414583695813236 1.0217872756442217 1.2600296177012826 1.2270322306135977 1.1273034686521737 0.9686213024204712 1.0151419082370554 1.0 11.04113783261198 -8.552741165050293 2.796554556762005 0.9848505337972422 1.230180176382387 0.6264655866555596 0.08045226317134982 0.11438001826954529 1.8133435343734818 0.01346006343273617 0.01563631055390323 2.8006499803051653e-09 8.552741165050293 0.24532964258514478 RAPFDLFENKK ddPTM_A549_PD325901_60min_R1 2 RAPFDLFENKK 11 2 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ; 84.479 0.00017152 7940800.0 2662.2 2820.2 3341.2 3089.3 3848.7 3661.5 3513.3 3138.2 3616.7 3196.8999999999996 3561.0 False True 2932.464584191944 3057.8681514927594 3567.9539242677893 3280.119044690647 3578.380589294205 3631.681957966454 3647.00055405153 3075.6061391297258 3464.7026764130414 2995.047188413633 3123.0195750388716 0.9389837347258524 0.979138323670193 1.142469279662898 1.050303709559624 1.1458079282931377 1.1628751824013948 1.167780241661193 0.984818079179489 1.1094079281811473 0.9590228675964525 1.0 11.608725896839337 -5.598127057524008 6.59605283734228 1.0739527146501315 0.9486327986112895 0.30639783477644134 0.07080028979019973 0.17271244746693504 11.816297586669599 0.009608812835957114 0.03824409562200754 2.5227426090101816e-06 5.598127057524008 -0.12531991603884207 RAPFDLFENR ddPTM_A549_MK2206_60min_R1 2 RAPFDLFENR 10 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 129.82 1.3107e-06 17994000.0 1122.82 1475.37 1259.6399999999999 1090.52 1594.96 1207.05 1236.44 1312.83 1791.65 1884.9 1627.52 False True 1312.3245656866125 1550.4600311852193 1438.275893064726 1357.6974489553038 1360.3434968307358 1334.7792298250565 1461.0851432614054 1498.9276728732546 1385.8441356771377 1459.0997808800958 1223.3618667330963 1.0727198561379756 1.2673764593673467 1.1756749431021116 1.109808541426047 1.111971472891696 1.0910747393079143 1.194319671875283 1.2252528982908693 1.1328161955692955 1.1926967976993768 1.0 10.256635496476127 -10.255921119599243 0.7585821407883891 1.0024783469348009 1.156412389811049 0.0 0.07922818141617816 0.4083768702762427 0.44573465642895505 0.033816182458352474 0.011686445777172993 5.5472645812880455e-11 10.255921119599243 0.15393404287624812 RAPFDLFENR ddPTM_A549_PD325901_60min_R1 2 RAPFDLFENR 10 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 142.08 4.9798e-08 32363000.0 1432.75 1487.02 1777.4 1821.38 1740.5 2006.7 1696.13 1894.51 1713.3400000000001 1567.0 1763.33 False True 1578.2017252651967 1612.3363940971433 1898.0250523744676 1933.8825059458932 1618.2532843990348 1990.3581005192643 1760.6771553079498 1856.7225118356553 1641.3342781003464 1468.0593525741067 1546.4515886698398 1.020530960573209 1.0426038589956594 1.227342043087834 1.2505289658690817 1.0464299666767805 1.2870484372751978 1.1385271729213156 1.2006341003100465 1.0613550984238174 0.949308315455797 1.0 10.594745955542132 -8.962981834340091 3.284011512310651 1.0247284874015148 1.1543343992974078 0.3596846285445471 0.08724105525201986 0.20532573772323187 4.372416252019339 0.015481142856389279 0.015880593788872417 1.0889756420297036e-09 8.962981834340091 0.129605911895893 RAPQAFEHSDVDGVVTSTDPVPEPEPS(ph)PLESK ddPTM_A549_MK2206_60min_R1 2 RAPQAFEHSDVDGVVTSTDPVPEPEPSPLESK 32 1 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 RAPQAFEHSDVDGVVTSTDPVPEPEPS(0.991)PLES(0.009)K;RAPQAFEHSDVDGVVTSTDPVPEPEPS(0.999)PLES(0.001)K 124.91 2.3327e-22 25203000.0 2449.0 2288.0 2177.3 2337.95 3169.2 1922.9 2645.3 2434.6 4046.8999999999996 3851.0 3923.6 True False 2862.3313276985778 2404.4494271618523 2486.0738798147318 2910.747854954562 2703.014878213853 2126.3800016822843 3125.9167686821784 2779.7120056498 3130.2836115713485 2981.056425364342 2949.2618341488746 0.9705246562228734 0.8152716043456177 0.8429478356343312 0.9869411461714361 0.9165055631603202 0.7209871897643617 1.0598980166792429 0.9425110966629368 1.0613786729026433 1.0107805250952373 1.0 11.526138194569205 -7.80298967752457 24.999980238500672 1.0239671869190994 0.8782359619453178 0.45942648829732247 0.0749604153616668 92.9418830949811 55920.93299908102 0.011333806048280621 0.015659980858031494 1.5740202759305863e-08 7.80298967752457 -0.14573122497378155 RAPQAFEHSDVDGVVTSTDPVPEPEPS(ph)PLESK ddPTM_A549_PD325901_60min_R1 1 RAPQAFEHSDVDGVVTSTDPVPEPEPSPLESK 32 1 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 RAPQAFEHSDVDGVVTS(0.001)T(0.001)DPVPEPEPS(0.997)PLES(0.002)K 88.322 1.4094000000000001e-09 8143800.0 1434.8 1484.1 1714.9 1828.6 1664.4 1577.9 1311.3 1890.9 2215.6 2269.6 2502.1 True False 1580.4598397560671 1609.1703154494023 1831.2834265314357 1941.548468948085 1547.498285868287 1565.050105551078 1361.2022390708935 1853.184516117647 2122.486036956545 2126.297068667642 2194.35756211872 0.7202380628570324 0.7333218356153856 0.8345419443690275 0.8847912949398546 0.7052170132082437 0.7132156274659148 0.6203192508684002 0.8445225828776692 0.9672471221632718 0.9689838636027196 1.0 11.099582911162111 -8.639388853691525 3.3591254420417207 0.9853287080825949 0.7492118355380594 0.7040943910139146 0.06624518610281344 0.09674804103130433 2.148852798327751 0.012166794273978227 0.013764173651662357 2.294093668570868e-09 8.639388853691525 -0.2361168725445355 RAPS(ph)PDGFSPYSPEETNR ddPTM_A549_MK2206_60min_R1 2 RAPSPDGFSPYSPEETNR 18 1 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 RAPS(0.998)PDGFS(0.002)PYSPEETNR;RAPS(0.997)PDGFS(0.003)PYSPEETNR 106.12 2.043e-09 12401700.0 4303.0 4670.1 3577.3 2846.38 4496.4 3607.9 3350.6000000000004 3682.5 5643.5 5594.0 6689.599999999999 True False 5029.2412017505 4907.788142390112 4084.614931456961 3543.743227778853 3834.985516345064 3989.68558326981 3959.360649131104 4204.505652183271 4365.256260817637 4330.311514798271 5028.387696432438 1.0001697373730087 0.9760162578299422 0.8123110583447913 0.7047474144233316 0.7626670312366578 0.7934323731840386 0.7874016261594562 0.8361538341934736 0.8681224528320911 0.8611729596487874 1.0 12.29588017271752 -10.025949091686256 0.7473049922363679 0.9923134312943115 0.8298339987660718 0.07688806564157513 0.09096054722367447 0.5585856506827696 0.6252098167414795 0.04518290986278962 0.019102537118634067 9.420000119749546e-11 10.025949091686256 -0.1624794325282397 RAPS(ph)PDGFSPYSPEETNR ddPTM_A549_PD325901_60min_R1 2 RAPSPDGFSPYSPEETNR 18 1 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 RAPS(0.998)PDGFS(0.002)PYSPEETNR;RAPS(0.875)PDGFS(0.125)PYSPEETNR 112.86 4.5243e-10 19079500.0 5731.9 5679.5 5285.7 5178.8 6301.3 5476.2 5980.4 5909.1 5446.5 6260.9 7751.099999999999 True False 6313.798268398242 6158.131397206986 5644.4193874961875 5498.68271409184 5858.718426304872 5431.603642828321 6207.987394600451 5791.238364900727 5217.602545713946 5865.5857055081215 6797.763838271215 0.9288051804406237 0.9059054629901797 0.8303347279760248 0.808895814110872 0.8618596593957054 0.7990279998031925 0.9132396391368675 0.8519328565514768 0.7675468977517274 0.8628698856063581 1.0 12.73084452661328 -11.001102634026095 1.2822654209586015 0.9999381092263857 0.8432617307852884 0.049906320330419196 0.06210693054631247 0.27679230453221676 0.8106285995689247 0.037583699904839535 0.008578361785702034 9.974643116311786e-12 11.001102634026095 -0.15667637844109727 RAPS(ph)PGAYK ddPTM_A549_MK2206_60min_R1 6 RAPSPGAYK 9 1 P54259 P54259 ATN1 Atrophin-1 1 RAPS(0.996)PGAY(0.004)K;RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(0.969)PGAY(0.031)K;RAPS(1)PGAYK 73.632 0.00092729 229690300.0 13545.0 13551.2 13112.6 11499.7 18152.3 13783.1 13039.500000000002 14044.0 19689.100000000002 20513.7 20719.2 True False 15831.064856544397 14240.898198144967 14972.163852688494 14317.12701624115 15482.120716206407 15241.618493518696 15408.608363978108 16034.780007946192 15229.550287031901 15879.640922616594 15574.050819170503 1.016502709562083 0.9143991093579504 0.9613532167404302 0.9192937137856149 0.9940972259541534 0.9786547296196948 0.9893770440899842 1.0295831312049248 0.9778798376775202 1.0196217481883347 1.0 13.926856618548065 -6.7922939356676695 24.984158734789567 0.9918190162205438 0.9507427482865715 0.3455757745476924 0.029219637680791707 160.49745941651256 129960.74867838915 0.0037201407172582626 0.007030947420456195 1.613266309430575e-07 6.7922939356676695 -0.041076267933972344 RAPS(ph)PGAYK ddPTM_A549_PD325901_60min_R1 4 RAPSPGAYK 9 1 P54259 P54259 ATN1 Atrophin-1 1 RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK 124.39 3.6782e-05 520929300.0 16773.600000000002 17461.2 17123.7 17874.6 20123.8 19167.2 17773.5 19350.6 19206.3 22215.1 20196.699999999997 True False 18476.443523928327 18932.71660408673 18285.817255173093 18978.673445838027 18710.373711341166 19011.108678064906 18449.88026853238 18964.637102747965 18399.126002707384 20812.434794747314 17712.63393742983 1.043122304068196 1.0688820573477025 1.0323601402122373 1.0714766371213058 1.056329271944301 1.0733078290457512 1.041622625618916 1.0706841890224152 1.0387571982632622 1.1750050765045776 1.0 14.112491141945261 -9.825194315926769 0.6702020153856673 1.001978497418662 1.0578625353945381 0.0 0.053400306237471454 0.24620440058731527 0.23038789810744395 0.0063140437319846535 0.002927041767695432 1.4955663466818058e-10 9.825194315926769 0.055884037975876044 RAPS(ph)PLPK ddPTM_A549_MK2206_60min_R1 5 RAPSPLPK 8 1 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK 78.683 0.0017714000000000002 424845000.0 17327.6 17407.8 16839.6 16344.3 21894.2 17270.1 16355.8 17014.4 24376.9 23070.4 24449.4 True False 20252.07526085336 18293.782665274524 19227.708495167473 20348.654233723515 18673.592183071356 19097.610519035414 19327.437147095592 19426.24330441467 18855.57107191026 17858.78061691133 18377.93921088783 1.1019774866191316 0.9954207844172512 1.0462385512612973 1.1072326445430918 1.0160873843792217 1.0391595216356586 1.0516650928764222 1.0570414387324658 1.0259894134778431 0.9717509897046056 1.0 14.165687380294012 -9.410801179346851 0.6181579226868447 1.0017064651692364 1.0518515017469383 0.3546983953076668 0.03228931101803597 0.623177434388599 0.5301001796796375 0.012393946761557487 0.007672778261465858 3.8832810248051164e-10 9.410801179346851 0.05014503657770186 RAPS(ph)PLPK ddPTM_A549_PD325901_60min_R1 5 RAPSPLPK 8 1 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK 88.596 0.0019544000000000002 725981100.0 28202.0 27429.77 29878.600000000002 28618.5 32955.1 30503.7 33069.5 30343.27 30420.969999999998 29883.96 36053.1 True False 31065.046278784914 29741.372982686178 31906.341470617623 30386.199747670755 30640.447464923058 30255.287980669487 34327.97791882476 29738.04967601517 29142.482422672823 27997.08166557147 31618.797259431056 0.9824866526040622 0.9406231596559261 1.0090940907342958 0.9610169387011503 0.9690579693313229 0.9568766241304492 1.0856825968794759 0.9405180542452509 0.921682193777323 0.8854568830008446 1.0 14.948494869925806 -4.904058554775521 18.812479345651 0.9700643005631487 1.7761205408212823 0.004530289563448031 0.049802198163714034 1531.7476054950905 377551.75678481435 0.006071997584663755 13535.021251782917 1.2472153441624637e-05 4.904058554775521 0.8060562402581336 RAPS(ph)PVVSPTEMNK ddPTM_A549_MK2206_60min_R1 6 RAPSPVVSPTEMNK 14 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RAPS(0.999)PVVS(0.001)PTEMNK;RAPS(1)PVVSPTEMNK;RAPS(0.999)PVVS(0.001)PTEMNK;RAPS(0.942)PVVS(0.014)PT(0.044)EMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK 140.28 1.1275e-10 226133400.0 14572.800000000001 16051.700000000003 14937.699999999999 14342.699999999999 19790.6 16845.4 15694.3 15578.7 22978.1 21210.3 21945.4 True False 17032.33236924697 16868.662967645934 17056.09047651152 17856.662143868263 16879.428956449297 18627.96904692846 18545.75115969029 17787.028432767835 17773.597038485656 16418.878498806895 16495.751517772133 1.0325284271466346 1.0226065147424193 1.0339686832779755 1.0825006744694183 1.0232591669596744 1.129258586785763 1.1242744011819976 1.0782793626349494 1.077465129087135 0.9953398292352782 1.0 14.009806885628421 -3.9889621476239987 13.604136830274404 1.0510080465473155 0.5744850736454887 0.0 0.044554204038451714 0.0 0.0 0.006333032847834172 0.0 0.00010257413242426678 3.9889621476239987 -0.47652297290182677 RAPS(ph)PVVSPTEMNK ddPTM_A549_PD325901_60min_R1 6 RAPSPVVSPTEMNK 14 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RAPS(0.923)PVVS(0.031)PT(0.046)EMNK;RAPS(0.994)PVVS(0.006)PTEMNK;RAPS(0.998)PVVS(0.001)PTEMNK;RAPS(1)PVVSPTEMNK;RAPS(1)PVVSPTEMNK;RAPS(0.999)PVVS(0.001)PTEMNK 161.1 1.3858e-19 368113000.0 24277.4 26381.2 24636.4 25801.200000000004 27838.0 24151.8 24151.6 25220.3 28235.0 27014.1 29777.4 True False 26742.02377592271 28604.43630882946 26308.374254708193 27394.88152522331 25882.75491588643 23955.115748303764 25070.70235426263 24717.26133155741 27048.381139857393 25308.42511574484 26114.968574491013 1.0240113327972449 1.0953272345412717 1.007405931952991 1.049010702313558 0.9911080245820626 0.9172944504977508 0.9600127330327934 0.9464786932847823 1.0357424349450732 0.9691156642043981 1.0 14.672589347190186 -6.7590643768996355 24.988900113198614 0.9983044491170049 1.0449999193272677 0.32282420881745366 0.03980154237435591 81.68325146479455 859421.6990115399 0.0064389854682971965 0.01292211906927808 1.7415486987647228e-07 6.7590643768996355 0.04669547021026277 RAPS(ph)SPVAK ddPTM_A549_MK2206_60min_R1 2 RAPSSPVAK 9 1 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.625)S(0.375)PVAK;RAPS(0.591)S(0.409)PVAK 52.57899999999999 0.011265 58592000.0 5429.9 5783.5 5101.4 4950.0 6640.6 5563.1 4768.4 5430.8 7300.2 7042.299999999999 6933.299999999999 True False 6346.334371690688 6077.855446674207 5824.855229176901 6162.750222213942 5663.776536749626 6151.78354951309 5634.756556830647 6200.632531127471 5646.716356023909 5451.4395389102365 5211.5702606546 1.2177393864576924 1.1662234494965433 1.117677578512636 1.1825131225305343 1.0867696785187784 1.180408829169348 1.08120130306425 1.189782008301782 1.0834961582796836 1.046026296539943 1.0 12.347502410704882 -10.378343074095225 0.1997825434852706 0.9020338872267064 1.1975586955601796 0.5600169828640473 0.043745569097005665 2.6628720332073232 0.18674683682595009 0.21650605250237132 0.05859349596413056 4.184628667210282e-11 10.378343074095225 0.29552480833347317 RAPS(ph)SPVAKPGPVK ddPTM_A549_MK2206_60min_R1 1 RAPSSPVAKPGPVK 14 2 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.5)S(0.5)PVAKPGPVK 89.866 2.3321999999999998e-05 21395000.0 1796.7 1921.9 1907.1 2008.1 2448.2 1706.1 1797.5 1537.8 2834.3 2573.1 2698.2 True False 2099.9390349024225 2019.7165009013834 2177.5554568477824 2500.0845901470343 2088.0730231109296 1886.6383695824757 2124.082482783132 1755.7878593149844 2192.335575447051 1991.834922904438 2028.1624734683699 1.035389946502317 0.995835652874228 1.073659277959095 1.232684571799432 1.0295393245986386 0.9302205293031217 1.0472940459995441 0.8657037502091258 1.0809467210474157 0.982088441611974 1.0 10.985957514063555 -6.974217625398982 24.999788580122736 1.017189032462458 1.0840266752622272 0.20212910061470024 0.07940690446068747 372.16319733479867 360865.05376633425 0.01186804526543262 0.022428197977539043 1.061163673768581e-07 6.974217625398982 0.06683764279976923 RAPS(ph)SPVAKPGPVK ddPTM_A549_PD325901_60min_R1 3 RAPSSPVAKPGPVK 14 2 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.5)S(0.5)PVAKPGPVK;RAPS(0.5)S(0.5)PVAKPGPVK;RAPS(0.821)S(0.179)PVAKPGPVK 126.63 5.7851999999999994e-08 310948000.0 14701.400000000001 13602.1 14398.7 13355.599999999999 15389.499999999998 13864.0 15807.0 15036.599999999999 15208.099999999999 13802.199999999999 15035.699999999999 True False 16193.875305401343 14748.396703574108 15375.882368416924 14180.54507923166 14308.594610892804 13751.096180594554 16408.544034922303 14736.68321701549 14568.956444592359 12930.72673650181 13186.404219155285 1.2280736307080018 1.1184547704179877 1.1660405757986005 1.0753913533632036 1.0851020773432203 1.0428238018533487 1.2443531809138964 1.1175664701380976 1.1048467954158954 0.9806105228988761 1.0 13.686763591414872 -10.35284419456237 0.49864931167702803 0.9830136744359468 1.1347637842031608 0.463687447878642 0.058528975878319026 0.9515072172176879 0.38424123364203383 0.06719538837636305 0.014983130621443758 4.437678194246673e-11 10.35284419456237 0.15175010976721404 RAPS(ph)TSPSFEGTQETYTVAHEENVR ddPTM_A549_MK2206_60min_R1 2 RAPSTSPSFEGTQETYTVAHEENVR 25 1 Q9BUT9 Q9BUT9 FAM195A Protein FAM195A 1 RAPS(0.444)T(0.275)S(0.275)PS(0.006)FEGTQETYTVAHEENVR;RAPS(0.427)T(0.427)S(0.114)PS(0.031)FEGTQETYTVAHEENVR 171.99 1.7667e-48 58340000.0 2562.8 2540.21 3020.4 1943.44 3172.3999999999996 2390.8 2699.9 2517.0 3992.3 3835.6 3953.1 True False 2995.337985555699 2669.495838885843 3448.7381374144175 2419.582887244338 2705.7441624528674 2643.792869115401 3190.4368819283322 2873.792457989218 3088.050424393063 2969.1352960601093 2971.4361699902934 1.0080438596685333 0.8983857253425583 1.1606300590416798 0.814280620152861 0.9105846491939641 0.8897357095589361 1.0737019742001572 0.9671392194161134 1.0392450814123162 0.9992256694074665 1.0 11.536944675125188 -7.762131833267363 24.999990590099067 1.018092594715585 0.9467665002244957 0.1379890049740068 0.08568800666324583 27.598362425022113 996418.9862669412 0.012502258737632624 0.017837710405957836 1.7292913404942646e-08 7.762131833267363 -0.07132609449108929 RAPS(ph)TSPSFEGTQETYTVAHEENVR ddPTM_A549_PD325901_60min_R1 1 RAPSTSPSFEGTQETYTVAHEENVR 25 1 Q9BUT9 Q9BUT9 FAM195A Protein FAM195A 1 RAPS(0.331)T(0.331)S(0.331)PS(0.005)FEGT(0.001)QETYTVAHEENVR 92.23100000000001 8.2782e-09 7125800.0 2781.6 2537.7 2910.7 2721.7 3616.2 3194.2 3341.7 2762.6 3106.1 3131.0 3898.3 True False 3063.9859842943097 2751.560885058924 3108.237605460988 2889.8132275708194 3362.2105872127468 3168.1874942336335 3468.8702221484045 2707.4977757822257 2975.561418753712 2933.308125660198 3418.8338133597413 0.8962079327521576 0.8048244036626403 0.9091514168705599 0.8452628543330555 0.9834378535962385 0.9266866034416006 1.0146355194549488 0.7919360587818469 0.8703439772726425 0.8579849989191463 1.0 11.739288580943528 -10.78251993032907 1.0315418366924076 1.0000169827993344 0.8933048036662501 0.0 0.07623787255993539 0.5720565824287132 1.0812535561733876 0.04411479623341064 0.011129615653533743 1.6499852796485814e-11 10.78251993032907 -0.10671217913308428 RAPS(ph)VANVGSHCDLSLK ddPTM_A549_MK2206_60min_R1 4 RAPSVANVGSHCDLSLK 17 1 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 RAPS(1)VANVGSHCDLSLK;RAPS(0.998)VANVGS(0.002)HCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(1)VANVGSHCDLSLK 234.8 3.617499999999999e-74 1113030000.0 25589.5 26701.199999999997 24063.1 19565.8 27886.9 25329.6 21282.1 25987.800000000003 32688.0 30628.4 30757.5 True False 29908.38199679162 28060.177029953713 27475.60941412293 24359.421878342135 23784.773951553063 28009.961459572307 25148.78209003555 29671.65023429964 25284.220192009754 23709.423167652367 23119.56388618463 1.2936395402624237 1.2136983711323985 1.188413827760017 1.0536280873748831 1.0287726043900827 1.2115263764257245 1.0877706090755244 1.2834000840314417 1.0936287689716604 1.0255134259613008 1.0 14.49682656349648 -14.999999999993559 0.029426250334351454 9.840554255175278e-13 1.8272517066959533 0.3600162358017659 0.0814939850363271 805.2528333263215 1.8331106223310505 87.06895785225439 36.81138634804611 1.000000000014831e-15 14.999999999993559 1.8272517066949692 RAPS(ph)VANVGSHCDLSLK ddPTM_A549_PD325901_60min_R1 8 RAPSVANVGSHCDLSLK 17 1 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 RAPS(1)VANVGSHCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(0.999)VANVGS(0.001)HCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(1)VANVGSHCDLSLK 235.76 3.357999999999999e-74 1327910000.0 55134.5 62311.1 70027.2 60912.8 57707.1 53352.09999999999 58469.6 67325.5 45005.0 71438.5 82730.1 True False 60731.71385212628 67562.27507782457 74779.6668997623 64675.245312994004 53653.95237468743 52917.61818643235 60694.692623792755 65982.64008666684 43113.59635910331 66927.86091822927 72554.82216931303 0.8370458645795246 0.9311893139254354 1.0306643261457853 0.89139830240461 0.7394953329150368 0.729346673374024 0.836535612783343 0.9094177080703274 0.594220963818145 0.9224453856705381 1.0 16.146783882036676 -6.561458771512125 7.657267198506674 0.8044043026980267 0.9374694318946474 0.16555834129896785 0.11163890155199817 0.328485086634341 54.51900568945106 0.021512634354882352 0.0451334890665534 2.7449929190564937e-07 6.561458771512125 0.13306512919662072 RAPS(ph)WR ddPTM_A549_MK2206_60min_R1 3 RAPSWR 6 1 A0A2R8Y7R9;Q13136-2;Q13136;M0QZB5;B1APN9;O75335-2;O75335-1;O75335 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 1 RAPS(1)WR;RAPS(1)WR;RAPS(1)WR 62.107 0.025787 137006000.0 5286.06 4914.11 3293.06 2822.7400000000002 6550.799999999999 4579.01 3600.5899999999997 4230.2699999999995 6457.2 6628.5 7140.700000000001 True False 6178.217696241049 5164.21720913913 3760.065425372114 3514.311426717613 5587.185997792288 5063.557798899164 4254.770596208128 4829.923727158536 4994.654510029531 5131.11724630682 5367.467116705799 1.1510490072704602 0.9621329943626352 0.7005288236735016 0.65474298217489 1.0409353008242253 0.9433793796592173 0.7926961644470081 0.8998515728444422 0.9305421722070882 0.9559662192129023 1.0 12.390025732234577 -9.551576842609627 0.7953434222896927 0.9902248016946379 0.8844280774485708 0.04807417931889579 0.13563006617886475 1.0714536317752876 1.4506512800165605 0.04841208725431137 0.030677914380589068 2.8081684608953514e-10 9.551576842609627 -0.10579672424606712 RAPS(ph)WR ddPTM_A549_PD325901_60min_R1 4 RAPSWR 6 1 A0A2R8Y7R9;Q13136-2;Q13136;M0QZB5;B1APN9;O75335-2;O75335-1;O75335 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 1 RAPS(1)WR;RAPS(1)WR;RAPS(1)WR;RAPS(1)WR 52.482 0.037536 180112000.0 5709.8099999999995 4747.200000000001 3906.49 4135.44 3966.17 4473.84 3503.32 3240.19 5819.41 5342.459999999999 6584.7 True False 6289.465707860036 5147.263204299848 4171.607903032703 4390.876736534324 3687.5999017437052 4437.406530336926 3636.6407596902623 3175.561868570118 5574.840435243406 5005.13616385007 5774.823643852421 1.0891182303992046 0.8913282070144877 0.722378406736902 0.7603481954308032 0.6385649379387254 0.7684055486371016 0.6297405745994759 0.549897635740038 0.9653698154363716 0.8667167124970613 1.0 12.495561173697368 -8.9076542049076 11.24014728770072 0.9847412434720489 0.7520317807894937 0.24959941049821688 0.1404869867885223 0.3339171139862257 38.44367078010115 0.024230408490517823 0.02577796410932055 1.2369319146354083e-09 8.9076542049076 -0.2327094626825552 RAPSS(ph)PVAK ddPTM_A549_PD325901_60min_R1 4 RAPSSPVAK 9 1 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.15)S(0.85)PVAK;RAPS(0.156)S(0.844)PVAK;RAPS(0.199)S(0.801)PVAK;RAPS(0.092)S(0.908)PVAK 75.294 0.0016750999999999997 128621600.0 19623.0 20281.6 23163.600000000002 22162.3 23277.7 22339.0 20707.8 23343.100000000002 22004.6 23653.8 27463.5 True False 21615.112514310906 21990.80161028139 24735.62119004232 23531.21493676482 21642.7546557055 22157.078590471858 21495.846660742955 22877.503558192308 21079.823185057754 22160.295031217225 24085.663605470392 0.8974264885689772 0.9130245265605548 1.0269852471253609 0.9769801373220356 0.8985741480998658 0.9199280930519801 0.8924747523194988 0.949839038397776 0.875202092429376 0.9200616347636827 1.0 14.555887052991977 -4.047931915062522 15.775542818038309 0.9376050131908168 0.9391235043479889 0.0 0.04658819940504439 0.0 0.0 0.007237406576238885 0.0 8.955051441068417e-05 4.047931915062522 0.0015184911571720638 RAPSS(ph)PVAKPGPVK ddPTM_A549_MK2206_60min_R1 3 RAPSSPVAKPGPVK 14 2 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.213)S(0.787)PVAKPGPVK;RAPS(0.134)S(0.866)PVAKPGPVK;RAPS(0.182)S(0.818)PVAKPGPVK 109.54 2.6658e-06 334104000.0 15898.0 18286.7 16407.0 14592.2 20603.8 15631.099999999999 14291.0 15276.900000000001 20790.300000000003 23784.7 22660.4 True False 18581.193731217616 19217.41492118911 18733.759310210025 18167.289655068755 17573.008313688824 17285.172626915566 16887.489714299714 17442.44735854409 16081.33024528697 18411.719750808443 17033.197284776004 1.09088114348474 1.1282329793928543 1.0998380983324814 1.0665812971770359 1.031691702966142 1.0147931910801486 0.9914456711772768 1.024026615022763 0.9441169485930984 1.0809315152631116 1.0 14.056061646858343 -6.893058370010223 0.8062811538900383 0.9764907429169976 1.1180954500370652 0.4906221653405869 0.037489477942362806 0.20026611201712333 0.24104161856903566 0.004403782126347197 0.015337981549894832 1.2792093644144703e-07 6.893058370010223 0.14160470712006767 RAPSS(ph)PVAKPGPVK ddPTM_A549_PD325901_60min_R1 1 RAPSSPVAKPGPVK 14 2 Q9GZR2;Q9GZR2-2;A0A0C4DG31 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.163)S(0.837)PVAKPGPVK 79.88 0.00011367 199790000.0 6257.8 5775.4 5990.4 6027.4 7167.2 6878.0 7035.8 6866.3 6523.0 6918.0 7207.8 True False 6893.087249251121 6262.11322676806 6396.944567201529 6399.698808781404 6663.800597497704 6821.987848393632 7303.551219137493 6729.346259991851 6248.860994343533 6481.196299366731 6321.286294008756 1.0904564243173593 0.9906390781102922 1.011968809776023 1.012404518815572 1.054184273193508 1.0792088083179265 1.1553900392171315 1.0645533119374533 0.9885426325756094 1.0252970673879358 1.0 12.6260024413504 -8.762854049161385 24.999395756814863 0.9945895731983614 1.056007046789643 0.2166339850043857 0.043485347705264146 36.75686318026465 649549.3567981069 0.007888210962472395 0.008621095250398744 1.726417981832639e-09 8.762854049161385 0.06141747359128158 RAPSVANVGSHCDLS(ph)LKIPEISIQDMTAQVTSPSGK ddPTM_A549_MK2206_60min_R1 2 RAPSVANVGSHCDLSLKIPEISIQDMTAQVTSPSGK 36 2 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 RAPS(0.041)VANVGS(0.177)HCDLS(0.782)LKIPEISIQDMTAQVTSPSGK;RAPS(0.221)VANVGS(0.358)HCDLS(0.422)LKIPEISIQDMTAQVTSPSGK 80.484 2.2955000000000003e-06 8844400.0 2171.79 2913.8 2911.5 2577.46 3438.5 2883.6 2239.01 2501.1 4532.4 3963.6 4095.7 True False 2538.3350568323785 3062.099974153938 3324.3944798973916 3208.9378157065744 2932.7012049534087 3188.740638021234 2645.809134785125 2855.6385842975083 3505.8186367555368 3068.2200071602488 3078.624654430508 0.8245029328857649 0.9946324472349076 1.0798310456954183 1.042328369289361 0.9526010911180426 1.0357679145563445 0.8594127026747123 0.9275695821469836 1.1387613074917222 0.9966203586217353 1.0 11.588070269550256 -8.749952826059495 24.996019606081944 1.0655261766691437 0.9704837281096841 0.14890484480826138 0.08100356494049415 260.9773404849954 567915.2294977577 0.014756772570516812 0.016661030642663652 1.778472580817777e-09 8.749952826059495 -0.09504244855945965 RAPSVANVGSHCDLS(ph)LKIPEISIQDMTAQVTSPSGK ddPTM_A549_PD325901_60min_R1 1 RAPSVANVGSHCDLSLKIPEISIQDMTAQVTSPSGK 36 2 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 RAPS(0.153)VANVGS(0.153)HCDLS(0.686)LKIPEIS(0.008)IQDMTAQVTSPSGK 79.76899999999999 2.5556e-06 7322100.0 1449.8 1608.2 1872.9 2159.0 1943.0 1967.7 1875.6 2228.0 2297.4 1859.6 2251.8 True False 1596.982628713649 1743.7286579783902 2000.0062566626198 2292.3565265552397 1806.5303829861095 1951.6757035888554 1946.976984367701 2183.560792167812 2200.8482674237084 1742.184538638679 1974.842875336291 0.8086631339932312 0.8829708326448276 1.012741966280251 1.1607791967575547 0.9147717043962195 0.9882688531645889 0.9858895655362736 1.1056883661167114 1.114442214573112 0.8821889378627182 1.0 10.947522157197044 -5.696489741498061 2.9467563339546263 1.0462235689282415 0.8217870260115469 0.37450456738957916 0.08267054689071676 0.14620087803341375 2.454008783203052 0.009998576557222466 0.04934313721101811 2.0114547103596014e-06 5.696489741498061 -0.22443654291669468 RAPTTALT(ph)LR ddPTM_A549_MK2206_60min_R1 1 RAPTTALTLR 10 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;E7EX50;H0Y7S5;Q9UPX8-2 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RAPTT(0.007)ALT(0.993)LR 66.215 0.0031997 3929100.0 600.14 578.6 278.94 384.11 606.08 442.47 443.49 460.71 697.18 723.21 904.02 True False 701.4289599857185 608.0482685995838 318.49788638934535 478.2169672433529 516.9264348693209 489.2918817121848 524.066392372457 526.0170533652014 539.2698431676869 559.8363587088413 679.5268843172764 1.0322313600446393 0.8948112026656495 0.46870535035466854 0.7037498858103598 0.7607152075942942 0.7200478641897715 0.7712224556045177 0.7740930719668184 0.7935960380868428 0.8238619716588717 1.0 9.40838681965474 -10.308728043267614 0.5886198784553202 1.0136795040834496 0.7533624024737935 0.08984767494253731 0.13845716079220347 0.884724257657906 0.5335347775726038 0.11507132225532045 0.030234995702328016 4.9121538066178446e-11 10.308728043267614 -0.26031710160965615 RAPTTALT(ph)LR ddPTM_A549_PD325901_60min_R1 1 RAPTTALTLR 10 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;E7EX50;H0Y7S5;Q9UPX8-2 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RAPTTALT(1)LR 85.45700000000001 0.00051421 10213000.0 859.72 902.79 1058.4 898.18 1046.9 1069.5 833.03 1257.2 1153.5 1162.3 1147.1 True False 946.9981415075871 978.8712816417802 1130.229388676232 953.6585386852188 973.369355608934 1060.7903465915954 864.731412501507 1232.124159745679 1105.0224064043032 1088.9121796406405 1006.0139720660185 0.9413369672816447 0.9730195691333231 1.123472854313461 0.9479575484689551 0.9675505337266408 1.0544489202402274 0.8595620304613025 1.2247584963609455 1.0984165598962352 1.0824026403971077 1.0 9.974434626873496 -8.242973530535687 24.97816835521491 1.061144351871536 0.9872498114727771 0.2838872906711901 0.08310366500070517 1226.722767022202 1659352.0876374703 0.013632236840903278 0.01757867057606571 5.71513468324103e-09 8.242973530535687 -0.07389454039875887 RAQEILSQLPIK ddPTM_A549_MK2206_60min_R1 1 RAQEILSQLPIK 12 1 P35754 P35754 GLRX Glutaredoxin-1 0 53.236999999999995 0.02617 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RAQEQS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RAQEQSPR 8 1 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 RAQEQS(1)PR 77.67699999999999 0.0035545000000000004 1830800.0 258.18 211.09 189.48 110.48 249.96 0.0 159.93 300.25 207.47 126.77 219.26 True False 284.3902435379294 228.87929512041944 202.33925223580167 117.30409868171519 232.40367191518675 0.0 166.01622366705402 294.26127820843175 198.7507573963596 118.76572056529646 192.29241000365718 1.478946795313037 1.1902669227353613 1.0522477316288947 0.6100297909807475 1.208595138574459 0.0 0.8633529719862401 1.5302802549660448 1.0335860754596584 0.6176308288145002 1.0 7.587158008790618 RAQQQAEAER ddPTM_A549_MK2206_60min_R1 1 RAQQQAEAER 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 63.408 0.0066226 2317300.0 241.01 427.27 283.35 295.56 357.83 249.13 260.02 360.37 414.94 533.73 633.5 False True 281.68659587122653 449.0162179822747 323.5332907020182 367.9722132681925 305.1936810145347 275.4927712408898 307.2622682466034 411.4535510868391 320.9567525230214 413.16002230841616 476.1844662894566 0.5915493171505487 0.9429459584877192 0.6794284853999272 0.772751400598008 0.6409148189832334 0.5785421212657259 0.6452589069964095 0.8640633624464563 0.6740176869354711 0.867646997240078 1.0 8.895376748701555 -10.810645724741335 0.7335391501806534 1.0302055971597583 0.7095917030455529 0.34952443957759316 0.11281354464032033 0.5788141866409338 0.464482633024334 0.11593989779766735 0.02000149329677265 1.5465154934749173e-11 10.810645724741335 -0.3206138941142055 RAQQQAEAER ddPTM_A549_PD325901_60min_R1 1 RAQQQAEAER 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 68.786 0.003963800000000001 2193800.0 721.61 774.56 653.17 726.87 805.77 874.43 717.35 560.36 650.46 808.93 1040.7 False True 794.8673159787951 839.8348895185563 697.4980440302861 771.7671090584565 749.1754949555935 867.3089319963428 744.6491467989817 549.1831802060839 623.1234282355811 757.8540217471423 912.7004975408468 0.8708961133695687 0.9201648205313601 0.764213502577904 0.8455863792535262 0.8208338846907062 0.9502667461376371 0.8158745928213498 0.6017123708004837 0.6827249792396372 0.830342509716037 1.0 9.83399770759645 -11.036507316288372 1.377682168281766 0.9983783583328824 0.7952081759141135 0.047304398793157065 0.10682399234892456 0.4007866107606992 1.373287973967666 0.07368266352829732 0.01710708219077449 9.193749865363154e-12 11.036507316288372 -0.20317018241876883 RAQS(ph)FAER ddPTM_A549_MK2206_60min_R1 2 RAQSFAER 8 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 RAQS(1)FAER;RAQS(1)FAER 61.435 0.0045315 7334400.0 858.54 1183.1 834.29 727.18 1226.97 916.97 819.24 905.1600000000001 1523.8899999999999 1161.1 1537.46 True False 1003.4405627122645 1243.3147365713237 952.6048671247103 905.3391326443507 1046.4843383573302 1014.0031567645765 968.0853035856763 1033.4692019362417 1178.7313481522804 898.8067035810279 1155.6662502626486 0.8682788499570808 1.0758423864058981 0.824290634868165 0.7833915132838689 0.905524703277867 0.8774186808121494 0.8376858832432454 0.8942626832801986 1.019958268993656 0.7777389911462378 1.0 10.174509100656941 -8.73601605273203 6.845347275881729 1.0094834679334606 0.8831402072564463 0.0 0.09879498978354985 0.12625149662699617 20.903184633884887 0.011936212143430299 0.013362085431856848 1.8364704610374612e-09 8.73601605273203 -0.1263432606770143 RAQS(ph)FAER ddPTM_A549_PD325901_60min_R1 2 RAQSFAER 8 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 RAQS(1)FAER;RAQS(1)FAER 84.479 0.0013200999999999998 14315400.0 2248.53 1730.58 1462.63 1750.75 1942.33 1862.85 1747.0 2341.8 2177.8 2333.8999999999996 2444.8 True False 2476.7991103197005 1876.422050071039 1561.8928673086903 1858.889851258263 1805.9074414747342 1847.6795672259489 1813.4830409950819 2295.090961893441 2086.2746395035033 2186.5371556941336 2144.105098864093 1.1551668393642935 0.8751539516720203 0.7284590984537801 0.866977020969293 0.8422662874275474 0.8617486000125717 0.8457995095276959 1.0704190587995603 0.9730281601441891 1.0197901011720556 1.0 11.06615990962466 -8.245891016639776 24.750106895012678 0.9931441026571187 0.8731276456399123 0.281012767263743 0.0997628347180954 752.0473628358528 1197121.0169863692 0.015460144938904713 0.019922570159877 5.67687044887274e-09 8.245891016639776 -0.12001645701720642 RAQS(ph)IER ddPTM_A549_MK2206_60min_R1 4 RAQSIER 7 1 O14681-3;O14681;E9PLB8;E9PL33;E9PM05;E9PS58;E9PK61 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 1 RAQS(1)IER;RAQS(1)IER;RAQS(1)IER;RAQS(1)IER 95.311 0.0056718 521080000.0 8153.200000000001 9288.7 7577.62 7332.79 9161.2 6705.59 6935.67 6682.2 10340.2 11029.400000000001 12061.8 True False 9529.260833398135 9761.45515475451 8652.24045981799 9129.323879181457 7813.599615768262 7415.171082989606 8195.79146223337 7629.4223133792375 7998.161209906363 8537.85087974903 9066.522171255201 1.0510381658371737 1.0766482417814571 0.9543064359616674 1.0069267693543356 0.8618078098943777 0.8178627860745664 0.9039619941831253 0.8414938130927213 0.8821641924909196 0.9416897370876909 1.0 13.14633353789861 -6.631504625347364 6.339103879078939 0.9177303888064443 1.0239307965099003 0.5161771592100315 0.05730755711106942 0.19902672399894847 10.463081333937685 0.010384200966365567 0.021764101045387573 2.3361212217976396e-07 6.631504625347364 0.10620040770345596 RAQS(ph)IER ddPTM_A549_PD325901_60min_R1 4 RAQSIER 7 1 O14681-3;O14681;E9PLB8;E9PL33;E9PM05;E9PS58;E9PK61 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 1 RAQS(1)IER;RAQS(1)IER;RAQS(1)IER;RAQS(1)IER 113.62 0.0031334 720800000.0 9905.9 10035.1 9609.5 10387.8 11074.2 10334.0 10043.8 11070.599999999999 10497.3 11399.7 12101.7 True False 10911.53967566185 10880.793095186507 10261.658456617773 11029.430813594503 10296.386395915988 10249.843330226786 10426.022305178241 10849.788198282306 10056.134986344076 10679.920996515024 10613.267618996888 1.0281036969360011 1.0252067021951627 0.9668707908816166 1.0392115990604738 0.9701429159749342 0.9657575497182789 0.9823574302900369 1.0222853684441222 0.9475060224001522 1.006280193801844 1.0 13.37358128197988 -5.173621667301917 0.5577873132734438 0.9780495692674066 1.0710690703554593 0.1379451774781849 0.02733225703480592 4.215562524118716 0.8156614665028693 0.005128742158374884 0.2586468788262971 6.704684291178052e-06 5.173621667301917 0.09301950108805268 RAQS(ph)LK ddPTM_A549_MK2206_60min_R1 2 RAQSLK 6 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 RAQS(1)LK;RAQS(1)LK 85.212 0.016752 25057000.0 3833.2 3487.3 3141.1 1920.37 3928.3999999999996 3833.5 2892.2 3418.8999999999996 3998.0 4303.6 4208.8 True False 4480.150447257728 3664.788674537384 3586.555212366718 2390.8607362086846 3350.5375639200124 4239.15842552865 3417.675302756814 3903.539544942126 3092.459383494094 3331.413771019993 3163.638803029304 1.416138417245298 1.1584093199982912 1.1336803711385937 0.7557312591814668 1.0590771489816555 1.3399628369298968 1.0802988316758095 1.2338764909585567 0.9775007755414261 1.053032276576592 1.0 11.627369179408172 -5.325654161524507 1.7935560634179601 1.0305675890152908 1.5071303513752379 0.30212550914224134 0.143976184467149 0.629344353722907 2.2264892646371215 0.020882277024336048 0.4833497589889446 4.724391054076848e-06 5.325654161524507 0.4765627623599471 RAQS(ph)LK ddPTM_A549_PD325901_60min_R1 2 RAQSLK 6 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 RAQS(1)LK;RAQS(1)LK 77.072 0.018752 30924000.0 6294.7 6535.9 5606.6 5562.8 6344.2 4552.4 4435.4 4718.1 5057.0 7082.9 7271.4 True False 6933.73331008678 7086.703230743043 5987.097591224642 5906.4015219645635 5898.6052783018395 4515.326763743411 4604.191574144009 4623.993794222152 4844.471876191208 6635.684485224726 6377.0638972023735 1.0872924314163792 1.1112799471637707 0.9388486124235308 0.9261945022309891 0.9249719578456107 0.7080573186234328 0.7219923852674385 0.7250976105556516 0.759671214572036 1.0405548058152294 1.0 12.63867662151516 -6.008558996488687 1.2877724128952748 0.8484298497617618 1.1205187930986358 0.4411851248890728 0.10831191523001651 0.45811286246171506 1.2669000660861247 0.01834958321618219 0.11379101347293934 9.804851118283432e-07 6.008558996488687 0.27208894333687395 RAQS(ph)LKAPSIATIK ddPTM_A549_MK2206_60min_R1 4 RAQSLKAPSIATIK 14 2 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 RAQS(1)LKAPSIATIK;RAQS(1)LKAPSIATIK;RAQS(1)LKAPSIATIK;RAQS(1)LKAPSIATIK 139.11 2.855e-10 87887100.0 9983.7 11698.0 12056.7 11056.400000000001 13668.900000000001 10210.7 9762.9 10005.5 14858.900000000001 14191.7 16674.4 True False 11668.704481969891 12293.378233802172 13766.521355239189 13765.218496340665 11658.222917082334 11291.189496685894 11536.692556975484 11423.810265558644 11493.382874787492 10985.785113436288 12533.68628997146 0.9309874375351437 0.9808270248185831 1.098361729881029 1.0982577813005092 0.9301511660149331 0.9008674092729032 0.9204548677914735 0.9114485556176033 0.9169994053532087 0.8765007244697285 1.0 13.613523168520162 -6.787956480373712 24.982536629455463 0.9466831859597565 1.0288922343254012 0.4081189433553296 0.05599058708522309 206.1087021644054 194180.45123466218 0.008683638194794863 0.016413862863969456 1.6294593087351048e-07 6.787956480373712 0.08220904836564469 RAQS(ph)LKAPSIATIK ddPTM_A549_PD325901_60min_R1 3 RAQSLKAPSIATIK 14 2 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 RAQS(1)LKAPSIATIK;RAQS(1)LKAPSIATIK;RAQS(1)LKAPSIATIK 188.09 6.1056999999999996e-27 117808000.0 15354.2 15099.099999999999 17997.4 17485.800000000003 18158.8 20218.8 18736.4 18619.5 17692.1 17792.1 20150.800000000003 True False 16912.947080835365 16371.554147296065 19218.811791157994 18565.85815286689 16883.38853245916 20054.14479632177 19449.42395495148 18248.119465784814 16948.562562935047 16668.70376958121 17672.379346445752 0.9570271636477109 0.92639218671982 1.0875056162159205 1.0505579236901585 0.9553545791135775 1.1347733320558804 1.1005549153098688 1.03257852879074 0.9590424826605888 0.9432065395842468 1.0 14.109208671856983 -8.745150535468783 23.92554214143584 0.9806589525889042 1.0329790605698506 0.15724001387819475 0.06296459117030881 233.20615211393263 342539.3110152759 0.010903099369771532 0.012341618009242935 1.7982474972365338e-09 8.745150535468783 0.05232010798094633 RAQVLATIHGHAGAFPAAGDAGEGAPGGGS(ph)SPER ddPTM_A549_MK2206_60min_R1 2 RAQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 34 1 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 RAQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.5)S(0.5)PER;RAQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.549)S(0.451)PER 103.57 1.1813e-14 9957800.0 1814.42 1952.06 1638.8200000000002 1792.65 2882.0 2283.4 2027.3600000000001 2207.7 3325.6 2775.7 2739.1000000000004 True False 2120.6497376900174 2051.4115160776073 1871.2293187516543 2231.8493304751155 2458.061617762316 2525.0278724017503 2395.7050694270974 2520.648235797693 2572.356909891936 2148.667442192628 2058.905874685795 1.0299886768809405 0.9963600285470401 0.9088464614912124 1.083997747500581 1.1938678926434338 1.2263930582970866 1.1635816376465975 1.2242658913110165 1.2493805285219741 1.0435967319392547 1.0 11.007662161631782 -6.481226622607421 5.72700137274307 1.1446820026622557 0.981339149233909 0.5020978221689792 0.07734619807376564 0.1814637179103293 15.382383113775122 0.014613661774684334 0.03372989856823487 3.3019719328828307e-07 6.481226622607421 -0.16334285342834676 RAQVLATIHGHAGAFPAAGDAGEGAPGGGS(ph)SPER ddPTM_A549_PD325901_60min_R1 2 RAQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 34 1 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 RAQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.546)S(0.454)PER;RAQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.552)S(0.448)PER 116.27 1.9552000000000004e-21 18637700.0 2120.8999999999996 2275.4 2100.54 2479.4 2640.4 2563.0 1702.33 2550.5 2363.2 2805.9 2906.2 True False 2336.212206675941 2467.1559435169956 2243.0952759731426 2632.546906874046 2454.9474128854977 2542.1277777599425 1767.1130997007199 2499.628276671456 2263.882922249372 2628.7349951421097 2548.755823919679 0.9166088743185796 0.9679844261121912 0.8800746053906147 1.0328752884713397 0.9631944299435026 0.9973994973949512 0.6933238104319907 0.9807248906359846 0.8882306029487724 1.0313796914054452 1.0 11.315577451473038 -10.96804005328316 1.236169440590905 0.9999788771370955 0.9221590718961715 0.13515575646226485 0.08619862936756503 0.8897993571930607 2.418884717978261 0.05823285268527295 0.013482229147219313 1.0763659400271024e-11 10.96804005328316 -0.07781980524092402 RAS(ph)AAAAAGGGATGHPGGGQGAENPAGLK ddPTM_A549_MK2206_60min_R1 3 RASAAAAAGGGATGHPGGGQGAENPAGLK 29 1 Q07617 Q07617 SPAG1 Sperm-associated antigen 1 1 RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(0.99)AAAAAGGGAT(0.01)GHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK 98.75 1.7312000000000002e-10 25245300.0 3205.77 4170.38 3128.2000000000003 3553.9399999999996 4655.610000000001 4203.59 2998.0400000000004 4268.28 5526.47 5932.2300000000005 5818.6 True False 3746.825602448452 4382.634528866804 3571.825798390871 4424.655459542429 3970.775936249275 4648.411103682788 3542.745060741662 4873.321761059286 4274.733368959131 4592.135122887332 4373.681034809522 0.8566755491833962 1.0020471300915688 0.8166635312367783 1.0116548107480192 0.9078796338019208 1.0628143814527689 0.8100145009536462 1.1142380347979635 0.977376570201878 1.0499474210257136 1.0 12.094632295565285 -6.393096120212586 0.45856358646668616 0.9950519496833292 0.8774295725442773 0.18069338942810687 0.08843498526497018 2.93468549891183 0.7635894812520253 0.018391115862443862 0.15672575384287904 4.0448635885919323e-07 6.393096120212586 -0.11762237713905188 RAS(ph)AAAAAGGGATGHPGGGQGAENPAGLK ddPTM_A549_PD325901_60min_R1 3 RASAAAAAGGGATGHPGGGQGAENPAGLK 29 1 Q07617 Q07617 SPAG1 Sperm-associated antigen 1 1 RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK 168.27 1.2729000000000002e-57 81972600.0 4892.0 5544.610000000001 5594.37 5708.55 5749.16 6962.1 5542.51 6731.5 5945.3 6716.6 7748.5 True False 5388.632238699943 6011.873743510488 5974.037589879679 6061.154168442297 5345.358835125283 6905.4029658768995 5753.4332510278455 6597.23495174041 5695.439716337668 6292.512729737877 6795.483621788458 0.792972588650246 0.8846866651601557 0.8791188269110143 0.8919386030169112 0.7866046233981613 1.0161753526615833 0.8466554510676074 0.9708264074962376 0.8381213219433414 0.9259845332511879 1.0 12.730360513201129 -10.934160068660859 1.0168636440848249 1.0050557474718147 0.8784373355549879 0.15757259550324398 0.06807137716233666 0.5336702356192808 0.9126187446665025 0.051844648460540974 0.010324538923274413 1.163697044547141e-11 10.934160068660859 -0.12661841191682677 RAS(ph)AILR ddPTM_A549_MK2206_60min_R1 2 RASAILR 7 1 P46779 P46779 RPL28 60S ribosomal protein L28 1 RAS(1)AILR;RAS(1)AILR 101.46 0.0045751 14825900.0 1024.71 1249.08 1123.18 864.47 1462.46 1272.46 1009.55 1037.81 1572.56 1249.1 1640.23 True False 1197.6559962458186 1312.6528367479573 1282.463813131085 1076.2651888075331 1247.334071309048 1407.1108726094124 1192.9721671731359 1184.9227456598292 1216.3776708622997 966.927442462374 1232.9156229549412 0.9714014275976036 1.0646736989202141 1.0401878192259346 0.8729431023252326 1.0116945945737552 1.1412872433532602 0.9676024416933963 0.9610736725193837 0.9865863066500814 0.7842608402876178 1.0 10.267858354062364 -11.822811353131172 15.909286672442821 1.000001771389464 0.998585250584721 0.0 0.0915588886617221 74.0836251250776 109160.30006705629 0.10665573265958542 0.008529711528536304 1.5037950359135046e-12 11.822811353131172 -0.0014165208047429712 RAS(ph)CTSSTSGSK ddPTM_A549_MK2206_60min_R1 2 RASCTSSTSGSK 12 1 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 1 RAS(0.477)CT(0.477)S(0.041)S(0.004)TSGSK;RAS(0.459)CT(0.459)S(0.069)S(0.011)T(0.002)SGSK 51.218 0.011469 13644600.0 1066.9 736.93 631.76 518.97 831.04 642.25 592.14 917.48 997.36 1012.9000000000001 882.65 True False 1246.9666367993511 774.4365893174755 721.3530677039242 646.1176732974484 708.7951168720313 710.2124687089537 699.7241732156903 1047.5355996646597 771.4595524566458 784.0851865103986 663.463645099272 1.8794799775544166 1.1672630369997123 1.0872533454278275 0.973855429864242 1.068325479636456 1.0704617712741245 1.0546533760881394 1.578889223851776 1.162775923225175 1.181805803983545 1.0 9.373873604169056 -5.260095951197757 4.057089699911249 1.1033623062522155 1.947922102360895 0.6503038437067061 0.1561598470794957 0.10693721635917697 3.7188964538288625 0.021967628875987272 0.26399933348016347 5.494194740176188e-06 5.260095951197757 0.8445597961086795 RAS(ph)CTSSTSGSK ddPTM_A549_PD325901_60min_R1 1 RASCTSSTSGSK 12 1 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 1 RAS(0.646)CT(0.182)S(0.151)S(0.018)T(0.002)S(0.001)GSK 46.89 0.015306 5747200.0 1403.5 1365.6 1126.5 602.43 798.3 770.49 1024.4 777.98 840.99 1022.9 1572.8 True False 1545.9822867979092 1480.6839045736172 1202.9510641947998 639.6407328822021 742.2301619854921 764.215384895145 1063.3841025731895 762.4625785864968 805.6461149215039 958.3139194307936 1379.3555708006577 1.1208004081939016 1.0734606332971437 0.8721109260439188 0.4637243263612715 0.5380992237952531 0.5540379877913207 0.7709281965316165 0.5527672448837245 0.5840742822054652 0.6947548113895917 1.0 10.429778687929494 -5.8798157690974024 3.649223984565704 0.7230058214314602 1.1006655431666752 0.5280034564436897 0.15427064136972674 0.19924924356405876 5.013103347508591 0.02904706351745549 0.10376074504272556 1.3188160713558603e-06 5.8798157690974024 0.377659721735215 RAS(ph)DDGKLTDPSK ddPTM_A549_MK2206_60min_R1 4 RASDDGKLTDPSK 13 2 P04049;P04049-2;A0A0B4J1W9 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 RAS(1)DDGKLTDPSK;RAS(1)DDGKLTDPSK;RAS(1)DDGKLTDPSK;RAS(0.999)DDGKLT(0.001)DPSK 136.43 3.5941000000000002e-09 626435000.0 34237.8 34009.600000000006 32668.600000000002 29256.3 39356.8 27066.0 25507.9 23425.0 41278.0 43176.8 45704.6 True False 40016.303606156944 35740.54337325341 37301.498714056645 36424.094813365205 33567.4668556377 29930.10615504327 30142.35525039436 26745.5654860538 31928.598907421005 33423.13089241007 34354.88643721089 1.1647921956980767 1.040333620039031 1.085769815663084 1.060230394879521 0.9770798374486749 0.8712037575715869 0.8773818916701818 0.778508336359535 0.9293757662618296 0.972878514778276 1.0 15.068227693654205 -6.777887829001397 2.8819856522040954 0.9364303465201244 1.0889236682168417 0.6164873040813912 0.06504618905137356 0.1836595337265596 3.1283436150052886 0.011161392951624922 0.023723064086202908 1.6676778902277923e-07 6.777887829001397 0.15249332169671737 RAS(ph)DDGKLTDPSK ddPTM_A549_PD325901_60min_R1 2 RASDDGKLTDPSK 13 2 P04049;P04049-2;A0A0B4J1W9 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 RAS(1)DDGKLTDPSK;RAS(1)DDGKLTDPSK 138.97 1.3774e-09 79087000.0 7307.0 7724.799999999999 6722.9 7256.6 8615.2 9417.8 9538.2 11102.2 12264.5 16524.1 17883.5 True False 8048.801260870901 8375.796006187955 7179.156422081865 7704.823701065665 8010.098072826519 9341.104559261634 9901.181420503317 10880.757911492594 11749.065715947616 15480.765505979458 15683.94287284687 0.5131873615024156 0.5340363755525221 0.45773926112106145 0.49125553207700023 0.5107196664618153 0.5955839443558292 0.6312941522915726 0.6937514373589129 0.7491142891299619 0.9870455172838478 1.0 13.937000671657458 -9.145953721293411 0.3499057446312415 1.0338272645096276 0.46009116825614715 0.9764580889336134 0.027943927118111726 0.13516323959279664 0.0448303753535872 0.028538548096718973 0.01859030280825384 7.145724673322855e-10 9.145953721293411 -0.5737360962534804 down RAS(ph)DGGANIQLHAQQLLK ddPTM_A549_PD325901_60min_R1 2 RASDGGANIQLHAQQLLK 18 1 H0Y4E8;Q9Y2K2-7;Q9Y2K2-8;Q9Y2K2;H7C3X8 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 RAS(1)DGGANIQLHAQQLLK;RAS(1)DGGANIQLHAQQLLK 179.36 9.379099999999999e-32 11881700.0 1343.0900000000001 1776.76 1791.42 2044.85 2116.81 2372.9 2056.2 2242.1 2459.1000000000004 2068.0 1787.33 True False 1479.4395080693996 1926.493800739762 1912.9965338835757 2171.155740308699 1968.1325681980572 2353.5758891324876 2134.449816195814 2197.3795566065764 2355.752578750605 1937.4261270729112 1567.4997408183747 0.9438212138376496 1.229023361582159 1.2204126635994343 1.3851075593640367 1.255587172965347 1.5014840690842546 1.361690698003842 1.4018372694973131 1.5028727070287693 1.2359977336017944 1.0 10.614249489143898 -5.024728351871107 1.6066581255293486 1.2898323242036214 0.6261126485666142 0.36861652966591785 0.1378841220431722 2.5055485120809924 3.772344556656581 0.02802433402515254 3.0994583323252045 9.446515644079038e-06 5.024728351871107 -0.6637196756370072 RAS(ph)DPVR ddPTM_A549_PD325901_60min_R1 2 RASDPVR 7 1 P10070;P10070-4;P10070-3;P10070-2;P10070-1;A0A2R8YGX0;P10071 P10070 GLI2;GLI3 Zinc finger protein GLI2;Transcriptional activator GLI3;Transcriptional repressor GLI3R 1 RAS(1)DPVR;RAS(1)DPVR 73.233 0.008015399999999999 10277500.0 704.8 664.91 556.41 511.49 801.75 843.1800000000001 818.86 631.15 589.77 609.94 763.69 True False 776.3507771536626 720.9442992018479 594.1713285651385 543.0835756219269 745.4378458873464 836.3134216354376 850.0221653973853 618.5612181224036 564.9840178804212 571.4282843069883 669.7609714297774 1.1591460390657606 1.076420290156362 0.8871393734644267 0.8108617832158465 1.1129908694082564 1.2486744634434448 1.2691425772134703 0.9235551853699765 0.8435606760936177 0.8531824168361547 1.0 9.387502498985622 -8.422597796309041 24.442595615728266 0.9238430655285597 1.0722119136686128 0.27783063305047573 0.13448668580312054 44.676151512994686 10880.191986214202 0.024697935691117077 0.029858343823999677 3.779220256036466e-09 8.422597796309041 0.14836884814005313 RAS(ph)DSLSAR ddPTM_A549_MK2206_60min_R1 6 RASDSLSAR 9 1 Q8NB49;H7C113 Q8NB49 ATP11C Phospholipid-transporting ATPase IG 1 RAS(0.986)DS(0.014)LSAR;RAS(0.993)DS(0.007)LSAR;RAS(0.828)DS(0.171)LS(0.001)AR;RAS(0.997)DS(0.003)LSAR;RAS(0.565)DS(0.435)LS(0.001)AR;RAS(0.888)DS(0.111)LS(0.001)AR 109.39 0.0003255 62936500.0 4208.47 3423.9 3495.7200000000003 3951.6800000000003 4776.38 3839.2299999999996 3879.1499999999996 4752.47 5791.370000000001 7363.32 7335.460000000001 True False 4918.756848787109 3598.161885340676 3991.4656607476963 4919.841777397657 4073.7808292323243 4245.49477032538 4583.941342469089 5426.14717632897 4479.63394191751 5699.940897952165 5513.862833603247 0.8920709486660838 0.652566448227969 0.7238964372531043 0.8922677124673042 0.7388252033411855 0.7699674254593304 0.8313484540335464 0.9840917955485382 0.8124311534587305 1.0337473147164449 1.0 12.42884766304723 -14.999999999761393 0.13543170702637297 1.6874128699786828 0.7225537993214123 0.5140118957590571 0.08226400202320382 44.79381706308451 0.41095669882528585 8.304627578598991 0.21074155912991296 1.0000000005494137e-15 14.999999999761393 -0.9648590706572705 RAS(ph)DSLSAR ddPTM_A549_PD325901_60min_R1 5 RASDSLSAR 9 1 Q8NB49;H7C113 Q8NB49 ATP11C Phospholipid-transporting ATPase IG 1 RAS(0.98)DS(0.02)LS(0.001)AR;RAS(0.996)DS(0.004)LSAR;RAS(0.985)DS(0.012)LS(0.004)AR;RAS(0.997)DS(0.003)LSAR;RAS(0.9)DS(0.1)LS(0.001)AR 130.56 2.0666e-05 68732300.0 5732.94 5264.2699999999995 5305.3099999999995 5340.31 6126.209999999999 4886.74 4546.68 5129.37 5647.889999999999 6056.67 6583.77 True False 6314.943848432631 5707.908507857173 5665.360240020695 5670.16881997602 5695.926143877166 4846.944009633486 4719.70639543876 5027.06069143708 5410.5288243665345 5674.25082256223 5774.008027956665 1.0936846325562515 0.988552229269608 0.9811832980816934 0.982016095669096 0.9864770045865124 0.8394418549758662 0.8174055824977774 0.8706362490486668 0.9370490650809227 0.982723057378613 1.0 12.495357398104568 -4.481144832600283 0.851793996220733 0.943700677623312 1.4968141524066334 0.3844106705145486 0.06041599851705973 7.52593234187004 1.5396748645475093 0.010948804530352413 5.37324965594307 3.3025938467030225e-05 4.481144832600283 0.5531134747833214 RAS(ph)DTSLTQGIVAFR ddPTM_A549_PD325901_60min_R1 2 RASDTSLTQGIVAFR 15 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 RAS(0.885)DT(0.048)S(0.065)LT(0.002)QGIVAFR;RAS(0.562)DT(0.35)S(0.082)LT(0.006)QGIVAFR 69.148 0.00098361 6606900.0 730.02 564.12 642.6800000000001 785.03 753.5699999999999 708.09 662.51 770.75 911.79 786.2 718.2 True False 804.1310929876806 611.6603721793125 686.2961295487913 833.5195201675131 700.6418428753695 702.3235498064909 687.7221805893826 755.3767866083216 873.4706371351357 736.5591978262687 629.8659530449082 1.2766702011758804 0.9710961026269384 1.0895907712285249 1.3233284258945883 1.1123665908409803 1.1150365350140088 1.0918548260384369 1.1992659437403574 1.3867563930271032 1.1693903984896823 1.0 9.29890101925357 -8.291413778851506 22.821767505594583 1.1889853258695608 1.136586468669534 0.035592392062374745 0.12152893290347073 941.7071144899538 716989.6760462648 0.026392102299697726 0.03191026908698202 5.111945572019437e-09 8.291413778851506 -0.052398857200026905 RAS(ph)EEEENKASEEYIQR ddPTM_A549_MK2206_60min_R1 1 RASEEEENKASEEYIQR 17 2 Q8IYW5 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 1 RAS(1)EEEENKASEEYIQR 74.062 0.00017557 4754000.0 2505.9 2359.3 2371.3 2220.9 2965.6 2232.7 2012.7 1847.8 2844.5 3660.4 3286.6 True False 2928.8346566271384 2479.3782926149306 2707.5859969708704 2765.020599699988 2529.364168506565 2468.962832053688 2378.381537189211 2109.731308650169 2200.2252917331034 2833.513097741792 2470.446514454505 1.185548701212764 1.0036154509349489 1.0959905349615422 1.1192392077796216 1.023848989932522 0.9993994274346212 0.9627334667127482 0.8539878504983602 0.8906184687098685 1.1469639521288948 1.0 11.270556106216976 -7.261795428821169 1.5955045637238119 0.9397737019071226 1.0933391100891312 0.296657348205817 0.0829020474335524 0.21545268828349992 1.0704154835845046 0.009767554221213231 0.018820871134371638 5.4727369138206746e-08 7.261795428821169 0.1535654081820086 RAS(ph)EELDGLFR ddPTM_A549_MK2206_60min_R1 3 RASEELDGLFR 11 1 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 RAS(1)EELDGLFR;RAS(1)EELDGLFR;RAS(1)EELDGLFR 78.486 0.00043843 9048600.0 1322.48 1389.54 1315.74 1361.4 1674.45 1221.37 1192.27 873.29 2103.44 1386.02 1608.04 True False 1545.682292468279 1460.2616507947907 1502.3317166341049 1694.943061115568 1428.1406231305018 1350.6145627202104 1408.890026007145 997.0815318384595 1627.0141985034559 1072.9171193673037 1208.7192883537452 1.2787768900200738 1.208106518084643 1.2429120070386688 1.4022636003633657 1.1815320868053696 1.1173930752439005 1.1656056452330044 0.8249074383486237 1.3460645612095932 0.8876478845874944 1.0 10.239263518229654 -6.986449482186824 24.307308535257132 1.136846370009633 1.2769369950382616 0.2583984647695271 0.14915396770700237 256.39895760610597 459931.5137819749 0.02253859454838381 0.04257657973724116 1.0316930806122538e-07 6.986449482186824 0.14009062502862868 RAS(ph)EELDGLFR ddPTM_A549_PD325901_60min_R1 2 RASEELDGLFR 11 1 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 RAS(1)EELDGLFR;RAS(1)EELDGLFR 111.88 4.5916000000000006e-05 10090600.0 2334.69 2722.2 2401.1 2048.07 3021.8999999999996 1809.23 2347.4 2793.8 3095.5 2609.8 3214.7 True False 2571.7060100920617 2951.6093475617304 2564.0530849872466 2174.574632395549 2809.6521689890506 1794.496230728294 2436.731591546568 2738.0754673063 2965.406899891218 2445.0167826087454 2819.312279662305 0.9121749401950245 1.0469252976528274 0.9094604749830575 0.7713138583768442 0.9965735932330236 0.6365014062731771 0.864299995826797 0.9711855926915143 1.051819240203647 0.867238723516505 1.0 11.461127570789014 -8.433805478459007 3.822631273982111 1.0241264077802754 0.8764143554274106 0.09813367958658603 0.11314025374762507 0.22292690314030517 6.044844123528283 0.017245736648823288 0.020783805408646907 3.6829389642543835e-09 8.433805478459007 -0.14771205235286478 RAS(ph)EGDR ddPTM_A549_MK2206_60min_R1 3 RASEGDR 7 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 RAS(1)EGDR;RAS(1)EGDR;RAS(1)EGDR 83.35799999999999 0.011691 38709000.0 2737.6099999999997 3125.8099999999995 1938.98 1144.54 115.92 0.0 0.0 172.30399999999997 154.88 3827.82 3852.7 True False 3199.651639861534 3284.900377586009 2213.9565202237477 1424.952351380353 98.86832155829545 0.0 0.0 196.72861965886932 119.79992729253756 2963.1128034635535 2895.9682608893304 1.1048641944987838 1.1343012359456042 0.7644961272965948 0.492046950453373 0.03413998795965178 0.0 0.0 0.06793189770610794 0.0413678315851942 1.0231855243308514 1.0 11.499830075581656 -10.999675998097052 1.3177635430323476 0.9953400803500857 0.35717846615646925 0.23367960915744646 0.4151198879996208 0.5803565546045713 1.8149610928500424 0.3235635301190773 0.0761219152010511 1.0007463203103448e-11 10.999675998097052 -0.6381616141936164 RAS(ph)EGDR ddPTM_A549_PD325901_60min_R1 4 RASEGDR 7 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 RAS(1)EGDR;RAS(1)EGDR;RAS(1)EGDR;RAS(1)EGDR 71.61399999999999 0.008524700000000001 116130000.0 2274.05 2485.3599999999997 1937.3300000000002 1544.49 1805.38 1503.69 1328.93 1406.28 1685.2099999999998 2179.59 2672.07 True False 2504.90988193287 2694.8100095716795 2068.808863911683 1639.8896395087104 1678.5763370228826 1491.4444471868308 1379.5031583684 1378.230642194682 1614.3864841756347 2041.970315428843 2343.422329647324 1.068910989812856 1.1499463735063231 0.8828152048133086 0.6997840802154972 0.716292712494338 0.6364386087467585 0.5886703138891783 0.5881272977381334 0.6889012124496541 0.8713624896354689 1.0 11.194401263609778 -5.89947339609321 4.043125712637028 0.7790802823180952 1.1080741525303541 0.5577679387560093 0.12548340976329528 0.17737828277339968 5.3262772904856766 0.023812244300258113 0.08147288919753952 1.260452848046576e-06 5.89947339609321 0.3289938702122589 RAS(ph)FAEK ddPTM_A549_MK2206_60min_R1 6 RASFAEK 7 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK 121.61 0.0027119 2776498000.0 44500.899999999994 49697.1 48078.399999999994 42046.700000000004 57426.6 42138.3 41244.8 42881.2 56563.8 57117.6 59412.700000000004 True False 52011.56397745266 52226.47011652328 54896.64006948263 52348.143387548116 48979.22321255703 46597.346936860275 48738.44627866131 48959.74141816736 43752.18961382774 44214.694490103975 44658.88688289758 1.164640849957477 1.169453019585308 1.2292433578434232 1.1721775225793902 1.0967407974360854 1.0434059196111545 1.0913493300104178 1.0963045618791905 0.9796972711960479 0.9900536617950566 1.0 15.446659672166694 -7.485764244420173 0.581310163816952 0.989042513378639 1.1996207303713033 0.7986506934668804 0.035890243328690376 0.2601010332715894 0.17257019331259368 0.009020389607651507 0.022934048653686666 3.267651676185981e-08 7.485764244420173 0.21057821699266432 RAS(ph)FAEK ddPTM_A549_PD325901_60min_R1 6 RASFAEK 7 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK 126.39 0.0024616 4307543000.0 42094.1 43081.9 43669.99999999999 42642.6 47383.9 44393.0 45462.7 47620.5 43920.4 43495.299999999996 48337.0 True False 46367.4620439614 46712.562908941225 46633.70880904296 45276.53655362879 44055.8183295808 44031.47812645222 47192.80792664399 46670.671769940425 42074.578325305185 40748.99933504568 42391.85543348889 1.0937823213874203 1.1019230564755853 1.1000629326595381 1.068048003340308 1.039251947787532 1.0386777761010209 1.113251766030567 1.100934868094293 0.992515611667871 0.9612459496843495 1.0 15.371499492111644 -8.768112014661076 24.976870136518492 0.9964656983182273 1.0809671179585991 0.7332634991799823 0.025889655073339082 61.20450504284389 229098.99815430766 0.004432877177529197 0.004772141704951608 1.7056424073655982e-09 8.768112014661076 0.08450141964037183 RAS(ph)FAK ddPTM_A549_MK2206_60min_R1 4 RASFAK 6 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0;K7ENT7;Q96J92-2;Q96J92-3;Q96J92;F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;A6PVV2;Q9Y3S1-3 F5GWT4;F8W9F9 WNK1;WNK4;WNK2 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4;Serine/threonine-protein kinase WNK2 1 RAS(1)FAK;RAS(1)FAK;RAS(1)FAK;RAS(1)FAK 95.90899999999999 0.014736 1441941000.0 24948.199999999997 26397.1 25515.1 21905.3 33168.5 24913.2 23696.399999999998 22923.9 34017.8 35516.6 36770.799999999996 True False 29158.84623507131 27740.599638869833 29133.524847683293 27272.099483366277 28289.457588046247 27549.49828795624 28001.72914883015 26173.4330264994 26312.822615263987 27493.37539265001 27639.59553754753 1.054966459095247 1.0036543263154878 1.054050331818579 0.9867040002925505 1.0235119956663583 0.9967402833565746 1.0131019866332946 0.9469542704032555 0.9519973828675906 0.9947097581547861 1.0 14.754448883834094 -7.453522585927752 1.057513274764304 0.9754579070083895 1.0274096390436234 0.43127801826661594 0.024857156309368748 0.3679347348982552 0.820268313920794 0.004594951165370109 0.009149939587076463 3.519471186797271e-08 7.453522585927752 0.051951732035233844 RAS(ph)FAK ddPTM_A549_PD325901_60min_R1 6 RASFAK 6 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0;K7ENT7;Q96J92-2;Q96J92-3;Q96J92;F8W9F9;H0Y7T5;Q9Y3S1-2;Q9Y3S1-4;Q9Y3S1;A6PVV2;Q9Y3S1-3 F5GWT4;F8W9F9 WNK1;WNK4;WNK2 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4;Serine/threonine-protein kinase WNK2 1 RAS(1)FAK;RAS(1)FAK;RAS(1)FAK;RAS(1)FAK;RAS(1)FAK;RAS(1)FAK 100.71 0.015725 2095821000.0 32880.399999999994 32703.9 33733.6 33360.7 38128.5 35534.9 35386.4 34967.899999999994 36038.899999999994 36046.799999999996 39388.1 True False 36218.394002728826 35459.97242734703 36022.964952615774 35421.31467135312 35450.4856961842 35245.51555595856 36733.048816181086 34270.43780271314 34524.310361650656 33770.79889621461 34543.613401737915 1.0484830750481549 1.0265275961420703 1.04282561681296 1.0254084961931356 1.0262529656032064 1.020319303196733 1.0633817715877119 0.9920918638172626 0.9994411980048883 0.9776278614360471 1.0 15.076131382048775 -8.286107185463935 24.98510122205806 0.9991554276866604 1.0346511732006218 0.6987292853358635 0.01356823849997278 304.9719230269995 308893.8157472377 0.0017995283683518745 0.0021760858432308804 5.174791004573783e-09 8.286107185463935 0.035495745513961396 RAS(ph)FITANGVSLLK ddPTM_A549_MK2206_60min_R1 1 RASFITANGVSLLK 14 1 Q9H3U1;A0A1W2PNX8;Q9H3U1-2 Q9H3U1 UNC45A Protein unc-45 homolog A 1 RAS(0.499)FIT(0.499)ANGVS(0.003)LLK 42.647 0.033158 1215500.0 567.4 353.79 180.83 559.62 391.72 263.95 242.09 167.31 612.9 394.77 673.3 True False 663.1632484018673 371.7963998407309 206.47441312033155 696.7269251222965 334.09850690834617 291.8810138041702 286.07461933628304 191.02670486538577 474.07912860018246 305.5911828203277 506.101027865337 1.3103376833653089 0.7346288179040376 0.4079707444800332 1.3766558192165559 0.6601419252545815 0.5767247994640187 0.5652520022393662 0.37744777099368787 0.9367282469268667 0.6038145864063315 1.0 8.983281594164273 -8.970139692051287 24.999035450284005 0.9720862575221831 0.7394696317909303 0.0 0.3264694182985926 307.38445670708626 257344.18180746262 0.05219447849885268 0.054922725555912065 1.0711747034394668e-09 8.970139692051287 -0.23261662573125286 RAS(ph)FITANGVSLLK ddPTM_A549_PD325901_60min_R1 2 RASFITANGVSLLK 14 1 Q9H3U1;A0A1W2PNX8;Q9H3U1-2 Q9H3U1 UNC45A Protein unc-45 homolog A 1 RAS(0.938)FIT(0.06)ANGVS(0.001)LLK;RAS(0.774)FIT(0.225)ANGVS(0.001)LLK 57.525 0.0049811000000000005 2860300.0 1560.18 1498.12 1553.18 1724.76 1922.5700000000002 1533.5700000000002 1831.52 1482.56 1644.9099999999999 1778.06 1691.98 True False 1718.5683250561883 1624.3718300525968 1658.588134830074 1831.294507985834 1787.5353157064367 1521.0811143735127 1901.2194958461992 1452.989177754179 1575.7801530286104 1665.792988154383 1483.8771863449233 1.158160756746557 1.0946807761454564 1.1177394936002067 1.2341280834006665 1.2046383165371537 1.0250721072949642 1.2812512473011803 0.979184255358203 1.061934348428162 1.1225949178837054 1.0 10.535155976362566 -8.286527588695014 24.994290833563813 1.026309274467853 1.1547412124848704 0.3662864287762009 0.07388687428373653 502.04619630418927 500165.3434693001 0.01071114609288781 0.012951860165892034 5.169784157073164e-09 8.286527588695014 0.12843193801701736 RAS(ph)FYENIIK ddPTM_A549_PD325901_60min_R1 2 RASFYENIIK 10 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 RAS(1)FYENIIK;RAS(0.998)FY(0.002)ENIIK 75.479 0.00064463 5304400.0 1515.49 1592.5300000000002 1507.0 1737.99 1781.45 1677.1999999999998 1811.4699999999998 1309.58 1932.12 1928.0700000000002 2247.8 True False 1669.3414291552285 1726.7380920845208 1609.274082327175 1845.3416950383248 1656.3270976688639 1663.541439273888 1880.4064821244192 1283.459399554364 1850.9197155282884 1806.3313311535148 1971.334849978202 0.8468076487227358 0.8759232821880129 0.8163372561211351 0.9360873902567742 0.8402058623816134 0.8438654849998125 0.9538747220672387 0.651061081565395 0.93891695545724 0.9162985837608909 1.0 10.944957137335855 -8.981885569504783 23.37656015452379 0.9730519082476632 0.848398772304985 0.276943256357729 0.0760260236553844 41.384903050678616 53408.45147012168 0.012445208226034172 0.012638773654499181 1.0425921015785066e-09 8.981885569504783 -0.12465313594267824 RAS(ph)GLSTEGATGPSADTSGSELDGR ddPTM_A549_MK2206_60min_R1 1 RASGLSTEGATGPSADTSGSELDGR 25 1 Q7Z628 Q7Z628 NET1 Neuroepithelial cell-transforming gene 1 protein 1 RAS(0.997)GLS(0.003)TEGATGPSADTSGSELDGR 201.28 1.9687999999999995e-68 53290000.0 2886.4 3320.2 3074.6 3038.9 4433.9 3256.4 2844.7 3102.7 4160.4 4319.9 4222.5 True False 3373.553754295292 3489.1839982791907 3510.624512413713 3783.4306364214035 3781.6791835518125 3600.990086576624 3361.5451676067737 3542.5172266202417 3218.0760427936048 3344.0315896991497 3173.9367149285395 1.0628925707396302 1.0993237457659104 1.1060789258656514 1.1920308992381994 1.1914790757373233 1.1345500588084976 1.0591090716446305 1.1161272403315705 1.0139068078003752 1.053591136197068 1.0 11.632057647249493 -8.608793160158097 1.2311787498160303 1.0031188249631353 1.1302525409547257 0.47225418236773076 0.04407315049516632 0.2024565896110163 0.5980432986212713 0.008732279341929843 0.009887913610727597 2.4615396734995854e-09 8.608793160158097 0.1271337159915904 RAS(ph)GQAFELILS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RASGQAFELILSPR 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 2 RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR 125.04 1.7739e-07 25586000.0 403.48 799.39 498.63 499.69000000000005 1135.21 1041.81 730.91 814.46 1351.71 898.88 904.29 True False 471.5775598610949 840.0755365292458 569.3432318431172 622.1140724319366 968.2221128035933 1152.0536427024906 863.706885947715 929.9121991791404 1045.5498432373186 695.8223837007275 679.7298358656553 0.6937720473319042 1.235896222591709 0.837602238127509 0.9152372598734858 1.424421971371221 1.6948699055343326 1.27066201948861 1.368061471062059 1.5381844198523094 1.0236749175715936 1.0 9.408817639219897 -6.753049098813507 24.99067302649685 1.3133645989367109 0.9372157531028427 0.43467379620403046 0.22446655654886166 171.08149631197762 509566.7062908451 0.03658096201830597 0.07518060168551785 1.7658381739857896e-07 6.753049098813507 -0.3761488458338682 RAS(ph)GQAFELILS(ph)PR ddPTM_A549_PD325901_60min_R1 4 RASGQAFELILSPR 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 2 RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR 137.87 6.3932e-10 94487100.0 3472.8799999999997 3794.06 4276.6 3777.4900000000002 3740.03 3932.6800000000003 4198.74 4903.4 3703.64 4706.9 3537.12 True False 3825.44422100087 4113.798751454729 4566.835793284936 4010.8169779977566 3477.343195203057 3900.653557955901 4358.525348338687 4805.597840357114 3547.9888905550342 4409.70553071542 3102.0766636510825 1.2331881625705532 1.3261434830604315 1.4721866312323375 1.2929457949878984 1.1209726812845087 1.257432997598747 1.4050346980170338 1.549155085903332 1.1437463593756325 1.4215333819394662 1.0 11.599018625743547 -8.962710950263183 6.675850049250399 1.0623074165586877 1.3297818652816118 0.013189171520157306 0.1557646129115205 0.11297181378460729 13.002380520094821 0.021693396103147397 0.022643975670473184 1.0896550846415444e-09 8.962710950263183 0.26747444872292414 RAS(ph)GQAFELILSPR ddPTM_A549_MK2206_60min_R1 6 RASGQAFELILSPR 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR 155.92 4.8373e-19 569442100.0 6633.2 6604.67 7051.780000000001 5746.51 9290.07 6833.85 6707.94 7267.51 10829.380000000001 8276.98 8921.77 True False 7752.721993830213 6940.819492173546 8051.828440821165 7154.405207970635 7923.513009481311 7557.003471057507 7926.685869018235 8297.70179831594 8376.542720966307 6407.204469387736 6706.24828067448 1.1560445825084311 1.0349780088182887 1.2006457416770966 1.0668267723680342 1.1815120284637606 1.1268600795521788 1.1819851483668913 1.2373090662669888 1.2490654044385958 0.955408180733704 1.0 12.711290180657961 -4.951895117066815 16.578051668823942 1.1327225925967852 1.3020655837998707 0.001104809699978726 0.09384758608950722 25613005.374688014 216249041.72124258 0.01362493190626014 139305463.12935454 1.1171330049250012e-05 4.951895117066815 0.1693429912030855 RAS(ph)GQAFELILSPR ddPTM_A549_PD325901_60min_R1 9 RASGQAFELILSPR 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR 200.71 1.5838999999999999e-31 701559600.0 14155.87 15607.75 16119.94 16398.81 18441.32 17079.712 17362.94 18131.986999999997 17651.57 17513.94 19229.31 True False 15592.9635013993 16923.069867903396 17213.936065473885 17411.727249300293 17146.065302300256 16940.620488232475 18023.696183065334 17770.330295016378 16909.735897888168 16408.1068394523 16864.226774639363 0.9246177550724232 1.0034892256876267 1.0207367521504407 1.0324651987889695 1.0167122116790273 1.0045299268453858 1.068753191232556 1.0537293249483353 1.0026985597298326 0.9729534035990917 1.0 14.041678551806088 -5.264600940406551 3.743001109430691 1.0135800417162666 0.9155667014975775 0.5229999024717251 0.02542697807701426 0.1647379862273349 4.352767378623989 0.0035096477780483027 0.04430800397453858 5.437497366113233e-06 5.264600940406551 -0.09801334021868913 RAS(ph)HTLLPSHR ddPTM_A549_MK2206_60min_R1 2 RASHTLLPSHR 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RAS(0.97)HT(0.03)LLPSHR;RAS(0.885)HT(0.115)LLPSHR 68.83 0.00085661 27106000.0 1312.31 1234.41 1133.24 1254.76 1894.29 1139.8 1284.92 1374.24 1890.29 2952.3999999999996 2183.1000000000004 True False 1533.795845100905 1297.2361964085942 1293.9504724021706 1562.176256328316 1615.6424503507892 1260.4128794619935 1518.3733317261203 1569.0427284334921 1462.1423331728488 2285.450789469147 1640.9760195051506 0.9346851062232057 0.7905272112384593 0.7885249126263111 0.9519799422781343 0.9845618894772143 0.7680873239342529 0.9252867279462121 0.9561643252450754 0.8910199270393784 1.3927386886240682 1.0 10.680338440763082 -14.999999998284949 0.13871527791606691 1.4079343998290512 0.8390953710448387 0.27304684126082346 0.13802578577423727 63.934266478023076 0.5970525056902745 7.189387201076337 0.16877237147294064 1.0000000039490514e-15 14.999999998284949 -0.5688390287842126 RAS(ph)HTLLPSHR ddPTM_A549_PD325901_60min_R1 3 RASHTLLPSHR 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RAS(0.959)HT(0.041)LLPSHR;RAS(0.941)HT(0.059)LLPSHR;RAS(0.966)HT(0.034)LLPSHR 97.69 6.1328e-05 37744000.0 2478.21 2326.12 2097.95 2607.9700000000003 2621.52 2691.46 2157.26 2190.47 2610.59 2913.27 3530.54 True False 2729.7960548382234 2522.1502959188515 2240.3295029982073 2769.05838377039 2437.393478953034 2669.5416421107184 2239.3557097979688 2146.7793574595275 2500.8759808712693 2729.325635018231 3096.3059619370238 0.8816299449717447 0.814567528830715 0.7235491358214081 0.8943103226265435 0.7871940011471672 0.8621698484992985 0.7232346342145871 0.6933356663876072 0.8076966590558582 0.8814780155998495 1.0 11.596332323314805 -10.411173769921989 0.8675242949492008 0.994647123336726 0.7976773291674557 0.3349554383677582 0.07084923229744096 0.31617169547402396 0.446283929313998 0.03666261921746078 0.012195253447932874 3.8799509032031864e-11 10.411173769921989 -0.1969697941692703 RAS(ph)ISEPSDTDPEPR ddPTM_A549_MK2206_60min_R1 4 RASISEPSDTDPEPR 15 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 RAS(0.984)IS(0.016)EPSDTDPEPR;RAS(1)ISEPSDTDPEPR;RAS(0.998)IS(0.002)EPSDTDPEPR;RAS(1)ISEPSDTDPEPR 224.64 3.7687999999999993e-54 370376000.0 3734.11 3747.2799999999997 3356.66 3809.09 5218.66 4070.79 3629.97 3801.33 5782.53 5122.01 5912.5599999999995 True False 4364.336477775637 3938.00054607302 3832.6848617181436 4742.31722099655 4451.002027117099 4501.558295828291 4289.488561907253 4340.180168584885 4472.79618780293 3964.9443836095606 4444.308173645442 0.9820058167109036 0.886077290820019 0.8623805352756141 1.0670540915947926 1.0015061632114872 1.0128816724551954 0.965164519270679 0.9765704804905222 1.006409999721986 0.8921398401491398 1.0 12.117743143057654 -6.254313582934391 24.999953820810365 1.0025184575138728 0.9077468226466504 0.32422383221929896 0.049164734328915924 284.68693276581365 998785.0360384593 0.0047238941076173865 0.012217959405986028 5.567835773990739e-07 6.254313582934391 -0.0947716348672224 RAS(ph)ISEPSDTDPEPR ddPTM_A549_PD325901_60min_R1 4 RASISEPSDTDPEPR 15 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 RAS(0.967)IS(0.033)EPS(0.001)DTDPEPR;RAS(0.999)IS(0.001)EPSDTDPEPR;RAS(1)ISEPSDTDPEPR;RAS(0.976)IS(0.024)EPSDTDPEPR 262.73 1.6409999999999998e-90 476139000.0 4849.1900000000005 4197.26 5000.92 4430.639999999999 4578.75 5156.469999999999 4727.21 4884.42 5523.950000000001 5381.129999999999 6048.18 True False 5341.476199015002 4550.977830485251 5340.312504174932 4704.31057008648 4257.154395829977 5114.477417942178 4907.106563378571 4786.996411346635 5291.797591553575 5041.364533450606 5304.292202571921 1.007010171201551 0.8579802274615628 1.006790783808167 0.8868875224870673 0.8025867039839524 0.9642148702634245 0.9251199549299407 0.9024760002900176 0.9976444338770991 0.9504311491373293 1.0 12.372944537410818 -8.768245476801205 24.420174802671017 0.9988876603275136 0.9167592905195028 0.17168200519760246 0.05916873791621059 101.53281160539822 364296.95212052047 0.009311331564919261 0.010023864512407048 1.7051183304512899e-09 8.768245476801205 -0.08212836980801086 RAS(ph)LEER ddPTM_A549_MK2206_60min_R1 1 RASLEER 7 1 A0A3B3ITN6;D6RBB0;O60683;O60683-2 A0A3B3ITN6 PEX10 Peroxisome biogenesis factor 10 1 RAS(1)LEER 49.35 0.022933000000000002 3174500.0 1088.8 604.56 864.6 420.0 426.94 236.52 302.64 262.52 486.53 1239.6 1070.9 True False 1272.5628213957573 635.3295217154589 987.2132808927646 522.9000188545167 364.13769156399826 261.5483894107308 357.6257705643879 299.73301393378205 376.33173182875964 959.5734990604097 804.965974663582 1.580890200890289 0.7892625796773349 1.2264037387485216 0.6495926974715315 0.4523640787626852 0.32491856506113725 0.4442743939752855 0.3723548862534829 0.46751259515787524 1.1920671547160022 1.0 9.652783992602524 -4.558209466405641 0.8456068194350173 0.6478292370364546 3.6062219912354956 0.4512971710908046 0.2968348498523418 4.7793525086844575 1.0748371489724835 0.04729932812828896 17.531718438527946 2.7656074318823543e-05 4.558209466405641 2.958392754199041 RAS(ph)LEER ddPTM_A549_PD325901_60min_R1 1 RASLEER 7 1 A0A3B3ITN6;D6RBB0;O60683;O60683-2 A0A3B3ITN6 PEX10 Peroxisome biogenesis factor 10 1 RAS(1)LEER 47.559 0.024753999999999998 7525300.0 877.72 555.31 734.5 738.24 623.79 596.56 666.05 524.98 557.0 950.86 876.33 True False 966.8254882566875 602.1079225606146 784.3475869073064 783.8394081353129 579.9771423586744 591.7018131488378 691.396897226545 514.5088620611575 533.5912270196765 890.822537325217 768.5469655135684 1.2579914197053956 0.7834367313626257 1.0205590837030754 1.0198978635112113 0.7546411193896454 0.769896752833372 0.8996156750999997 0.6694566306918482 0.694285776879118 1.1590996741883433 1.0 9.585989614743706 -6.749250200281215 24.72095419519551 0.8291719920389722 1.0035465584800602 0.18506056733375464 0.1677432655129497 237.48456525361854 481640.253502474 0.021984404309416436 0.045488825557126744 1.7813522215119746e-07 6.749250200281215 0.17437456644108806 RAS(ph)LSDIGFGK ddPTM_A549_PD325901_60min_R1 1 RASLSDIGFGK 11 1 Q07002;Q07002-3;D6R9B0;A0A0A0MSJ6;D6RA44 Q07002 CDK18 Cyclin-dependent kinase 18 1 RAS(0.971)LS(0.029)DIGFGK 49.928999999999995 0.011484000000000001 2096900.0 692.51 553.26 422.43 643.81 697.4 592.78 416.33 393.34 722.67 796.53 616.44 True False 762.8131054010826 599.8851618661392 451.09864007794863 683.5766815014031 648.4170298993889 587.9525962155824 432.1736659745176 385.4945251307392 692.2986930526205 746.2369598633396 540.6217879351201 1.4109921620336685 1.109620764929532 0.8344070663539089 1.264426807717633 1.1993912276010699 1.0875488360564234 0.7994011259242527 0.7130576934442796 1.2805601041290313 1.3803309014117933 1.0 9.078475845769665 -7.500849994683934 23.47011639835893 1.0692927640333616 1.1475954640092172 0.060970200871129254 0.21974453258490684 1346.3465279126015 1434437.9534889332 0.03368933153404457 0.05354302329249749 3.1560945502057206e-08 7.500849994683934 0.0783026999758556 RAS(ph)LSDLTDLEDIEGLTVR ddPTM_A549_MK2206_60min_R1 4 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;Q8WZ73-2;Q8WZ73;J3KSU7;K7EN88;Q8WZ73-3 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 RAS(0.992)LS(0.008)DLTDLEDIEGLTVR;RAS(0.881)LS(0.054)DLT(0.064)DLEDIEGLT(0.001)VR;RAS(0.999)LS(0.001)DLTDLEDIEGLTVR;RAS(0.937)LS(0.063)DLTDLEDIEGLTVR 377.28 6.676399999999996e-284 275636000.0 22637.32 25894.6 24050.870000000003 22128.03 38171.72 30863.09 27165.53 28584.31 43218.9 34167.6 35411.06 True False 26457.94618666294 27212.524535220855 27461.645016221806 27549.39834336503 32556.71055377174 34129.00169853894 32101.155164684093 32636.223478278025 33429.888156401445 26449.11542957121 26617.5165064624 0.9940050635542681 1.0223540024334725 1.0317132708287966 1.0350100970793565 1.2231310365062562 1.2822008277989736 1.2060161644641163 1.2261182770509171 1.2559356598233002 0.9936732986771961 1.0 14.700088349335907 -6.665150664501556 7.112010728363914 1.1563139512434368 1.0198137208445726 0.3821704415478422 0.09013371698263667 0.25272605035221735 16.16901664716651 0.016010506160086473 0.03343805115192383 2.1619683682270351e-07 6.665150664501556 -0.13650023039886428 RAS(ph)LSDLTDLEDIEGLTVR ddPTM_A549_PD325901_60min_R1 3 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;Q8WZ73-2;Q8WZ73;J3KSU7;K7EN88;Q8WZ73-3 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 RAS(0.998)LS(0.002)DLTDLEDIEGLTVR;RAS(0.882)LS(0.118)DLTDLEDIEGLTVR;RAS(0.994)LS(0.006)DLTDLEDIEGLTVR 340.36 8.785299999999996e-207 717280000.0 30546.9 33447.2 31005.3 33976.0 34605.0 29999.8 35950.5 35656.5 30772.6 35981.9 36423.4 True False 33647.99880056077 36265.912926958605 33109.506108015106 36074.620354905455 32174.46418076906 29755.491575202 37318.615950368425 34945.30313551688 29479.33463659911 33709.99669329054 31943.55270695615 1.053358062869239 1.135312445038751 1.036500429734763 1.1293239886573327 1.007228734885291 0.9315022611346022 1.1682675465913903 1.093970462712717 0.9228571069422586 1.0552989206472867 1.0 14.96323715528149 -8.756167914497595 24.995877744184067 0.9635714103597541 1.0691509118229268 0.1602318422228154 0.0700220014573965 106.67110623258338 505805.63360647374 0.01135510234486435 0.012691028725649015 1.7532025170867718e-09 8.756167914497595 0.10557950146317263 RAS(ph)LSEIGFGK ddPTM_A549_MK2206_60min_R1 7 RASLSEIGFGK 11 1 Q00537;Q00537-2;F5H6Z0 Q00537 CDK17 Cyclin-dependent kinase 17 1 RAS(1)LSEIGFGK;RAS(0.991)LS(0.009)EIGFGK;RAS(1)LSEIGFGK;RAS(1)LSEIGFGK;RAS(0.998)LS(0.002)EIGFGK;RAS(0.962)LS(0.038)EIGFGK;RAS(1)LSEIGFGK 121.18 4.4872e-06 118878300.0 11536.41 12700.91 13471.37 11754.529999999999 17186.74 12881.82 12311.509999999998 12905.309999999998 18687.83 18509.47 17481.09 True False 13483.473969855093 13347.332069027201 15381.812833472544 14634.3903776809 14658.593313136804 14244.965642139941 14548.352004233302 14734.677213354316 14455.06634333228 14328.167871614798 13140.05289946008 1.0261354404752148 1.0157746069329476 1.1706050920163782 1.1137238555776454 1.115565776279266 1.084087389231535 1.1071760605188345 1.121356004126875 1.1000767237342122 1.0904193446742925 1.0 13.681683463248893 -10.584759859531491 0.832617265271792 0.9987550367629433 1.0967178336369414 0.022628717797570364 0.04864454096551245 0.5022185680940329 0.6111773503837129 0.0304334997219873 0.008007657663766979 2.6015977030072353e-11 10.584759859531491 0.09796279687399811 RAS(ph)LSEIGFGK ddPTM_A549_PD325901_60min_R1 5 RASLSEIGFGK 11 1 Q00537;Q00537-2;F5H6Z0 Q00537 CDK17 Cyclin-dependent kinase 17 1 RAS(1)LSEIGFGK;RAS(1)LSEIGFGK;RAS(0.994)LS(0.006)EIGFGK;RAS(0.991)LS(0.009)EIGFGK;RAS(0.971)LS(0.029)EIGFGK 159.58 1.986e-13 268123400.0 10205.5 10402.0 11270.6 10608.6 13398.9 12577.6 12838.699999999999 11798.5 12630.8 11389.1 14105.400000000001 True False 11241.554847107978 11278.61304582218 12035.490691623536 11263.869128121321 12457.807487695622 12475.172195689993 13327.283754106205 11563.169661755801 12099.971400790182 10669.990282324037 12370.525221497706 0.9087370702395251 0.9117327553903707 0.972916709365586 0.9105408967233486 1.0070556637357835 1.0084593800439798 1.0773417874728413 0.9347355471747578 0.978129156534328 0.8625333275083219 1.0 13.59461913437983 -6.764144571805881 24.999261428565273 0.9944161302039546 0.9283165504286987 0.17143919687406817 0.0534691556882212 50.56607677600615 467298.18248657545 0.005112197350142768 0.009981865498073486 1.7212954794696673e-07 6.764144571805881 -0.06609957977525593 RAS(ph)LTLEEK ddPTM_A549_MK2206_60min_R1 2 RASLTLEEK 9 1 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 SCYL2 SCY1-like protein 2 1 RAS(1)LTLEEK;RAS(1)LTLEEK 149.83 9.929e-06 90256000.0 7254.5 8634.9 9201.2 6962.400000000001 9349.0 7965.4 7802.1 7222.900000000001 10898.1 9712.3 10273.5 True False 8478.882244503602 9074.379527360084 10506.068517407488 8668.188312554017 7973.774484545411 8808.293340995402 9219.640577981789 8246.768194203547 8429.69775068959 7518.284684514702 7722.306415824361 1.0979727801436219 1.1750866954418033 1.3604832483568265 1.1224869677265563 1.032563855301798 1.1406298671269588 1.1938972738881648 1.0679151732835248 1.0916036345586675 0.9735802077354012 1.0 12.91481608522776 -9.173744336489598 0.22019177214341087 0.9535536376748757 1.216701371703067 0.4157786529577343 0.07776993916189966 2.049935308266819 0.34081062859782413 0.19743667271243645 0.12955259297099442 6.70279077867297e-10 9.173744336489598 0.26314773402819136 RAS(ph)LTLEEK ddPTM_A549_PD325901_60min_R1 5 RASLTLEEK 9 1 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 SCYL2 SCY1-like protein 2 1 RAS(1)LTLEEK;RAS(1)LTLEEK;RAS(1)LTLEEK;RAS(1)LTLEEK;RAS(0.999)LT(0.001)LEEK 143.42 1.4949e-05 168241900.0 22885.5 23242.699999999997 22991.7 23716.6 27476.0 26792.699999999997 26719.5 24604.0 26436.4 25480.4 28319.3 True False 25208.81911258533 25201.44389926275 24552.05502232362 25181.520517693385 25546.180547054228 26574.509134291362 27736.32519397144 24113.25391853539 25325.37004305742 23871.563195487746 24836.205630833585 1.0150028344623283 1.0147058803529847 0.9885590169153214 1.013903689315211 1.0285862875663754 1.0699907034631615 1.1167698321654023 0.9708912173202227 1.0196956177402778 0.9611598305439919 1.0 14.600157161170866 -6.519786934528912 22.882017498791242 1.0206180931909046 1.0059976519960259 0.03165591306904725 0.041166336790158214 154.8243222524641 1145817.1499935866 0.005658813805334451 0.011982112625407021 3.0214336763713036e-07 6.519786934528912 -0.014620441194878708 RAS(ph)MQPIQIAEGTGITTR ddPTM_A549_MK2206_60min_R1 4 RASMQPIQIAEGTGITTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 RAS(1)MQPIQIAEGTGITTR;RAS(1)MQPIQIAEGTGITTR;RAS(1)MQPIQIAEGTGITTR;RAS(1)MQPIQIAEGTGITTR 140.35 1.4243e-14 49962000.0 5969.3 6187.7 5818.799999999999 5862.599999999999 8013.3 6196.1 5693.299999999999 6578.2 8783.2 8793.199999999999 9641.1 True False 6976.771904626832 6502.627500196419 6643.993336639858 7298.9372631821125 6834.554185154321 6851.767189361691 6727.698914731124 7510.679994892594 6793.819223888279 6806.810012857372 7246.948789176453 0.9627185326667219 0.89729176917992 0.9167987148691974 1.0071738431604906 0.9430940363980416 0.9454692434966592 0.9283491729345673 1.036392033859827 0.9374730554236926 0.9392656428072954 1.0 12.82315798416451 -9.01278827789898 0.007064311739581848 1.9279720069924746 8.33021842813193e-07 0.05295068181564844 0.03904929449760991 2604.8852818501427 12.583723329840451 1727.7836839039087 1705.5495852335046 9.709832141142151e-10 9.01278827789898 -1.9279711739706318 RAS(ph)MQPIQIAEGTGITTR ddPTM_A549_PD325901_60min_R1 3 RASMQPIQIAEGTGITTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 RAS(1)MQPIQIAEGTGITTR;RAS(1)MQPIQIAEGTGITTR;RAS(1)MQPIQIAEGTGITTR 195.75 7.312599999999999e-49 61734000.0 6248.0 6288.4 5942.400000000001 5615.3 7539.4 6252.700000000001 6312.000000000001 7022.2 6978.6 6871.2 8479.4 True False 6882.2923604655025 6818.345537141723 6345.686998554083 5962.144327728412 7009.858553517997 6201.780084276075 6552.2066140589295 6882.136712190673 6685.313710735211 6437.351259353674 7436.487555345301 0.9254762156521802 0.9168771528758545 0.8533177728500121 0.8017419895287606 0.9426303078365746 0.8339663097826707 0.8810888965112628 0.9254552853038578 0.8989880855686835 0.8656440572843487 1.0 12.860405644836126 -10.452475655762616 0.46813545763010733 1.0192368841705144 0.8782304456936617 0.0 0.05639782181199258 0.8724525128458303 0.2898777866016591 0.055924886687326765 0.01079836829515864 3.5279656196233474e-11 10.452475655762616 -0.14100643847685268 RAS(ph)NEKESAAPASPAPSPAPSPTPAPPQK ddPTM_A549_PD325901_60min_R1 2 RASNEKESAAPASPAPSPAPSPTPAPPQK 29 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 RAS(0.996)NEKES(0.003)AAPASPAPSPAPSPTPAPPQK;RAS(0.992)NEKES(0.008)AAPASPAPSPAPSPTPAPPQK 178.07 2.6468000000000003e-58 53980000.0 4478.8 4012.3999999999996 4665.0 4521.1 5603.6 5247.0 4793.9 5089.6 5928.5 5580.9 5591.1 True False 4933.484478881702 4350.539029519022 4981.594952923871 4800.358078836915 5210.022467370544 5204.270171637307 4976.334487822737 4988.083935286044 5679.3457619141 5228.521021557648 4903.430144903075 1.006129246892579 0.8872440110197629 1.0159408425756904 0.9789795993783456 1.0625260916148993 1.0613529749265302 1.0148680292703758 1.0172641983022768 1.1582393536935687 1.0662986658416032 1.0 12.259575609756746 -6.560994109108012 1.054438097820507 1.067856720732295 0.9493204678924174 0.3512689228362652 0.051231818090992406 0.5093144179020885 1.0473147583203626 0.010375660158115132 0.039927770813110865 2.7479314265611e-07 6.560994109108012 -0.11853625283987768 RAS(ph)PEPDAAAAPR ddPTM_A549_MK2206_60min_R1 1 RASPEPDAAAAPR 13 1 C9JK89;O14492;O14492-2 C9JK89 SH2B2 SH2B adapter protein 2 1 RAS(1)PEPDAAAAPR 43.297 0.054558 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RAS(ph)PEPDAAAAPR ddPTM_A549_PD325901_60min_R1 3 RASPEPDAAAAPR 13 1 C9JK89;O14492;O14492-2 C9JK89 SH2B2 SH2B adapter protein 2 1 RAS(1)PEPDAAAAPR;RAS(1)PEPDAAAAPR;RAS(1)PEPDAAAAPR 82.34899999999999 0.00022491 9918800.0 1378.03 2310.13 1993.62 2062.9300000000003 2581.1800000000003 2406.14 1780.63 2175.24 2660.13 2333.45 2596.2599999999998 True False 1517.9265911479317 2504.81276250194 2128.919041810951 2190.352500846043 2399.8868213875908 2386.545193593174 1848.392849048124 2131.8531317572306 2548.33398695126 2186.1155687709315 2276.93647904814 0.6666530248496401 1.1000802110865484 0.9349927243912106 0.9619734766433655 1.0539981433258294 1.048138679121543 0.8117893784287007 0.936281337390861 1.119194149859014 0.9601126728334664 1.0 11.15287832903934 -5.253667241745486 24.796195013565523 1.022412973575696 0.6666528321465264 0.5094135069530512 0.08765536938698078 502.0081036221057 1601562.099638592 0.012890269415226408 0.19013116662022556 5.576128305859279e-06 5.253667241745486 -0.35576014142916956 RAS(ph)PGLSMPSSSPPIKK ddPTM_A549_MK2206_60min_R1 1 RASPGLSMPSSSPPIKK 17 2 P57682;P57682-2 P57682 KLF3 Krueppel-like factor 3 1 RAS(0.838)PGLS(0.153)MPS(0.007)S(0.002)SPPIKK 41.871 0.032389 4573500.0 1073.7 1386.6 1516.1 1286.4 1952.6 1703.7 1359.2 1511.1 2127.7 1684.6 1925.8 True False 1254.9143105553128 1457.1720173525455 1731.105777424845 1601.5680577486905 1665.3751265935787 1883.984403175469 1606.1490462302265 1725.3030525496647 1645.779347238715 1304.0476899944883 1447.5707106238924 0.8669105428462655 1.0066327030922828 1.1958695797863657 1.106383298580576 1.150462021904142 1.30148005161246 1.1095479028710025 1.1918609846741592 1.13692501178709 0.9008524975145796 1.0 10.499418107056089 -5.446587504900402 3.5473339321037116 1.1082385126473806 0.8733430301894265 0.3635472484452995 0.1001533339427094 0.20571006429930608 4.557290130085909 0.013126180718268557 0.09499458510951077 3.576123389082488e-06 5.446587504900402 -0.2348954824579541 RAS(ph)PNLFSEAQYQEAPVEK ddPTM_A549_MK2206_60min_R1 2 RASPNLFSEAQYQEAPVEK 19 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 RAS(0.978)PNLFS(0.022)EAQYQEAPVEK;RAS(0.997)PNLFS(0.003)EAQYQEAPVEK 128.52 8.3991e-17 34895000.0 4424.4 4880.2 4892.8 4563.200000000001 6179.0 4596.2 4059.3999999999996 5370.4 7343.7 6461.0 7732.0 True False 5171.130553805466 5128.581334980456 5586.672612482214 5681.184204849831 5270.077285271802 5082.566833289359 4796.940434275292 6131.670646160229 5680.363675479133 5001.455612640617 5811.931007656002 0.8897439675373957 0.882422955163202 0.9612420734387491 0.9775037242124968 0.9067687276964538 0.8745057067253795 0.8253608702436983 1.0550143554840958 0.9773625440488615 0.8605497219516622 1.0 12.50480186177198 -8.26928272351973 24.998974326206987 0.9939392202302816 0.9059648941784979 0.22201688035689193 0.05901656515466068 398.29162059210483 1269467.1693742957 0.007393830102906188 0.009020938812818584 5.379194856328144e-09 8.26928272351973 -0.08797432605178368 RAS(ph)PNLFSEAQYQEAPVEK ddPTM_A549_PD325901_60min_R1 2 RASPNLFSEAQYQEAPVEK 19 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 RAS(0.999)PNLFS(0.001)EAQYQEAPVEK;RAS(0.99)PNLFS(0.01)EAQYQEAPVEK 162.75 3.3172e-27 55612000.0 7966.4 8318.6 8515.3 9110.099999999999 10299.9 10462.099999999999 8093.0 10155.4 10287.6 10337.0 9983.8 True False 8775.143063446278 9019.637616129241 9093.199464658654 9672.810186461735 9576.470556726004 10376.900126298202 8400.983543659522 9952.84258024282 9855.247948092685 9684.320055876547 8755.855892522632 1.0022027739104429 1.030126320812552 1.0385277665915114 1.1047246899897207 1.0937218102120851 1.1851382952933154 0.9594702844337394 1.136706988147486 1.1255607754473116 1.1060392238920709 1.0 13.09603249490801 -5.923176653824908 2.8363269568706873 1.0727330473801373 1.0143693096202293 0.15403411233183928 0.0608468633291487 0.489279745459533 7.828440240397629 0.009387071780117965 0.03572057780220912 1.1935025360707738e-06 5.923176653824908 -0.058363737759907997 RAS(ph)PNSDDTVLSPQELQK ddPTM_A549_MK2206_60min_R1 2 RASPNSDDTVLSPQELQK 18 1 Q9UH62 Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 RAS(0.912)PNS(0.068)DDT(0.019)VLSPQELQK;RAS(0.928)PNS(0.061)DDT(0.011)VLSPQELQK 159.46 4.2981e-23 28244000.0 4176.9 3959.5 4441.7 4069.0 5410.4 5217.9 4886.700000000001 3725.4 6112.4 6546.4 7069.7 True False 4881.858604599503 4161.021637608112 5071.599849342348 5065.905182664352 4614.5373271135395 5770.054714638299 5774.550135530644 4253.48685855901 4727.951159497071 5067.563693327742 5314.0983762061105 0.9186616917853908 0.7830155452595866 0.9543669481262239 0.9532953332868197 0.8683575275488205 1.0858012603744285 1.0866472027289158 0.8004155281738872 0.8896995924400807 0.9536074296286594 1.0 12.375609220347298 -5.788222643947128 24.767280242404976 0.9509293661016294 0.8508386204924331 0.17700270070068913 0.08605697275015105 230.9629104670499 213578.37305172888 0.012204580168037594 0.037960782440059404 1.6284609772869474e-06 5.788222643947128 -0.10009074560919629 RAS(ph)PNSDDTVLSPQELQK ddPTM_A549_PD325901_60min_R1 1 RASPNSDDTVLSPQELQK 18 1 Q9UH62 Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 RAS(0.978)PNS(0.022)DDTVLSPQELQK 194.75 7.9158e-49 19272000.0 3244.0 3389.8 3344.7 4042.3 3871.8 3152.0 3233.6 3856.4 3717.1 3381.6 4060.1 True False 3573.32849189342 3675.4703425041353 3571.6914553149986 4291.983690270611 3599.8581249848767 3126.331157042268 3356.656417493817 3779.4810767127233 3560.883213563445 3168.0851988925333 3560.7334390944493 1.0035372074361664 1.0322228286313018 1.0030774604187547 1.2053650641599643 1.0109878165719637 0.8780020213580895 0.9426868017246098 1.0614333089965602 1.0000420628141808 0.8897282689316467 1.0 11.797958722471819 -6.984057121032255 24.997297069493577 0.9908046573584273 1.061516289224275 0.2409782226567988 0.07307638404528966 305.9031872608462 479631.7484744236 0.009526111532815816 0.0179989142322572 1.0373919627905836e-07 6.984057121032255 0.07071163186584783 RAS(ph)PPDPS(ph)PSPSAASASER ddPTM_A549_MK2206_60min_R1 2 RASPPDPSPSPSAASASER 19 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 2 RAS(1)PPDPS(0.611)PS(0.329)PS(0.047)AAS(0.006)AS(0.006)ER;RAS(0.998)PPDPS(0.965)PS(0.032)PS(0.003)AAS(0.002)ASER 57.431999999999995 0.0015796 14590800.0 1164.89 1407.42 1100.5 1347.1100000000001 1582.94 1296.05 1046.32 1314.12 1516.85 1682.76 1363.62 True False 1361.4949531738646 1479.0516664231363 1256.567448094481 1677.152010474067 1350.0916229079382 1433.197150751638 1236.4228002145453 1500.4005343237138 1173.2858969117092 1302.623347272423 1024.9955200025715 1.328293564805482 1.442983542425069 1.225924819740996 1.6362530154959696 1.3171683159205916 1.3982472340445373 1.2062714188364876 1.463811797265172 1.1446741707795616 1.2708576006938594 1.0 10.001401888749688 -9.05169925194171 0.7782106565893625 1.0240316853849634 1.3931431685388675 0.27802292819138086 0.14001673613442334 0.24201297725032875 0.3121766602271443 0.03129879639032886 0.027070142878694976 8.877705785667145e-10 9.05169925194171 0.3691114831539042 RAS(ph)PPDPSPS(ph)PSAASASER ddPTM_A549_PD325901_60min_R1 2 RASPPDPSPSPSAASASER 19 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 2 RAS(1)PPDPS(0.171)PS(0.406)PS(0.386)AAS(0.018)AS(0.02)ER;RAS(0.998)PPDPS(0.052)PS(0.91)PS(0.031)AAS(0.005)AS(0.005)ER 58.924 0.0010753 13936100.0 1078.1399999999999 1380.6599999999999 1397.8899999999999 853.95 1188.51 1150.9099999999999 1166.62 1435.33 1040.74 1549.99 1578.1799999999998 True False 1187.591979115281 1497.0130636266917 1492.7592215954446 906.696552038836 1105.0331577369122 1141.537370542994 1211.0163624989593 1406.7012171553984 997.0013170708402 1452.123366877051 1384.073864907287 0.8580408959566854 1.081599112289408 1.0785256910370444 0.6550926038182012 0.7983917518816335 0.8247662205654469 0.8749651252031119 1.0163483704315355 0.7203382293022524 1.049166091272392 1.0 10.4347052230788 -6.214530883623452 24.999747779245403 0.8569507773384621 1.0136096399273389 0.18515705879070432 0.1279399779702324 498.00063698595574 265407.276741083 0.018344100480177362 0.0485337989821072 6.101956627634649e-07 6.214530883623452 0.15665886258887673 RAS(ph)PPDPSPSPSAASASER ddPTM_A549_MK2206_60min_R1 2 RASPPDPSPSPSAASASER 19 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 RAS(1)PPDPSPSPSAASASER;RAS(1)PPDPSPSPSAASASER 131.97 5.991300000000001e-17 64208000.0 3164.2 3493.25 3478.87 3362.1 4190.8 2682.12 2815.1600000000003 2926.1 4311.0 4594.8 5666.3 True False 3698.2396027373766 3671.041504122877 3972.2260773761445 4185.814650930404 3574.338871519192 2965.940158152837 3326.6381319787247 3340.8836358054223 3334.565383252385 3556.8314887728106 4259.201328075687 0.8682941513845381 0.8619084239864891 0.9326222855895853 0.9827698501450178 0.8392040188281221 0.696360638930598 0.7810474020211916 0.784392044063068 0.7829086080697073 0.8350935339278248 1.0 12.056367210876124 -4.31970404631277 16.5675282259806 0.8707420011493551 0.8549597603251521 0.0 0.08998056408757137 0.0 0.0 0.014544181844486989 0.0 4.789563700503351e-05 4.31970404631277 -0.015782240824202987 RAS(ph)PPDPSPSPSAASASER ddPTM_A549_PD325901_60min_R1 2 RASPPDPSPSPSAASASER 19 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 RAS(1)PPDPSPSPSAASASER;RAS(1)PPDPSPSPSAASASER 107.88 4.6755e-10 74856000.0 6466.700000000001 5519.700000000001 5657.1 5455.6 6577.8 5912.799999999999 5437.299999999999 6222.299999999999 5867.9 6311.1 7859.9 True False 7123.194623467072 5984.864490388833 6041.024824905816 5792.580021433429 6115.798020178089 5864.648117182589 5644.219426904726 6098.191345200079 5621.292569171918 5912.616068940937 6893.182128011245 1.0333681152165042 0.8682295606362468 0.876376789807629 0.8403346834395405 0.8872242030753597 0.8507896655379104 0.8188118813760608 0.8846699872355571 0.8154858619401835 0.8577484185300046 1.0 12.750954418606742 -10.93608864642206 1.1828331718947245 1.0003112561253311 0.8671624197907836 0.0 0.06935852264840255 0.3597911628584403 0.8910699704002353 0.0390359072549992 0.009072229403473298 1.1585408553750396e-11 10.93608864642206 -0.13314883633454755 RAS(ph)PPVS(ph)PIPVSEYCESENK ddPTM_A549_MK2206_60min_R1 1 RASPPVSPIPVSEYCESENK 20 1 A0A087WX12;A0A087X032;A0A087WTH3;A0A087X251;A0A087X0T6;Q2M2Z5-5;Q2M2Z5-2;Q2M2Z5-3;Q2M2Z5-4;Q2M2Z5 A0A087WX12 KIZ Centrosomal protein kizuna 2 RAS(1)PPVS(0.999)PIPVS(0.001)EYCESENK 54.658 0.0022081999999999996 2509000.0 990.26 973.87 703.18 767.59 1530.7 821.93 908.94 1235.5 1328.0 1177.9 1473.5 True False 1157.3916784674534 1023.4358232649104 802.9014976384155 955.6495844584241 1305.536057706029 908.9060870470225 1074.0826324900693 1410.6359085600627 1027.21012038023 911.8115719129215 1107.589283468847 1.044964677558662 0.9240210595570433 0.7249090521387287 0.8628194572860396 1.178718571217333 0.8206165413594734 0.9697481264229655 1.2736092066023854 0.9274287280598468 0.8232397925133661 1.0 10.113207284684746 RAS(ph)PS(ph)PPPK ddPTM_A549_MK2206_60min_R1 2 RASPSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK 51.092 0.043879 8910500.0 3953.5 4009.8999999999996 2999.3599999999997 3584.0 3422.4 2568.8999999999996 2050.39 2648.1 3408.1 5097.7 5149.3 True False 4620.754146205113 4213.986782332304 3424.7143490383096 4462.080160891873 2918.9694936258647 2840.7392929021894 2422.919322321951 3023.476284466128 2636.1707916173655 3946.126029493592 3870.586696549802 1.1938123360791795 1.0887204221749134 0.8848049708048297 1.1528175211446166 0.7541413543915194 0.7339298963215041 0.6259824445946952 0.7811415998409805 0.6810778309053815 1.019516248792754 1.0 11.918336548719095 -6.765630791782597 24.99966755615086 0.8093469304695364 1.0667136637631116 0.5022771580250298 0.13391627340205958 83.71520480659014 499323.18239211827 0.02203818471766939 0.04272894519875708 1.715415019291666e-07 6.765630791782597 0.2573667332935752 RAS(ph)PS(ph)PPPK ddPTM_A549_PD325901_60min_R1 3 RASPSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK 77.64 0.003109 47956900.0 12670.2 11872.0 11635.9 12430.2 13985.3 13676.0 12396.300000000001 12355.599999999999 13890.6 14376.0 15323.5 True False 13956.469376691735 12872.495104787617 12425.582146350875 13197.985222967556 13003.020774665789 13564.62719026335 12868.04798001565 12109.157865219315 13306.826387862682 13468.29690657649 13438.806643669803 1.038519992641294 0.9578599831147254 0.9246045780563265 0.9820801484024861 0.9675725768992081 1.0093624791195888 0.9575290664723566 0.9010590141144115 0.9901791684852249 1.002194410834877 1.0 13.714117413075503 -8.974098760246434 24.9903113572526 0.9956673235626605 0.965812834445461 0.12781552391369055 0.03507789494745689 263.43130689800876 254169.01761298336 0.006020719729212809 0.00626561700740019 1.0614541509683563e-09 8.974098760246434 -0.029854489117199567 RAS(ph)PS(ph)PPPKR ddPTM_A549_MK2206_60min_R1 2 RASPSPPPKR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RAS(1)PS(1)PPPKR;RAS(1)PS(1)PPPKR 68.83 0.001234 74570000.0 7190.3 6935.7 5763.2 5234.4 8386.2 6501.700000000001 6356.799999999999 6526.799999999999 9322.2 9416.9 9200.1 True False 8403.846854042906 7288.697505230097 6580.508420588921 6516.828234981146 7152.6010891319675 7189.705578520832 7511.748276248017 7451.993887486695 7210.736584494412 7289.615749678914 6915.4612601572735 1.2152257872458652 1.053971272635592 0.951564642332949 0.9423562637140619 1.0342912526082606 1.039656692163629 1.086225197952621 1.077584503353464 1.0426978495329497 1.0541040540097149 1.0 12.755609766775095 -2.0000088145147004 0.005566934078880002 6.13236369663188e-10 2.158013092681074 0.019946399189484598 0.06893757812150378 83127.66392359331 34.82188126870379 6199.616251112163 7345.003268115604 0.009999797040358149 2.0000088145147004 2.1580130920678373 RAS(ph)PS(ph)PPPKR ddPTM_A549_PD325901_60min_R1 2 RASPSPPPKR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RAS(1)PS(1)PPPKR;RAS(1)PS(1)PPPKR 58.11600000000001 0.0037438000000000003 164613000.0 7313.6 6553.0 7074.599999999999 6289.700000000001 7970.299999999999 6052.1 6653.3 7023.4 6720.6 7909.0 8705.099999999999 True False 8056.071288012238 7105.2443077555035 7554.724899025766 6678.200484054884 7410.4936240423 6002.813704167363 6906.494972325454 6883.312777249287 6438.1565535160435 7409.624390241617 7634.42788617548 1.0552292074957281 0.9306845796031122 0.989560057631294 0.874747994692288 0.9706678397553951 0.7862820624761332 0.9046512817066258 0.9016147483315257 0.8433057001133432 0.9705539826578309 1.0 12.89830433209635 -2.178174990414961 0.864204438607127 0.9129209929022736 39.2373572017435 0.30769755963328504 0.06150187457342516 545.8965700832802 1.903363363249841 0.010735017533298277 41035.224062542286 0.0066347568206660415 2.178174990414961 38.32443620884123 RAS(ph)PSKPASAPASR ddPTM_A549_MK2206_60min_R1 3 RASPSKPASAPASR 14 2 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 RAS(0.985)PS(0.015)KPASAPASR;RAS(0.827)PS(0.153)KPAS(0.017)APAS(0.003)R;RAS(0.992)PS(0.008)KPASAPASR 153.68 3.3798000000000002e-15 2855190000.0 7253.3099999999995 8338.96 8210.91 7366.35 9973.93 8192.189999999999 7503.08 7732.129999999999 10771.04 11786.0 11187.599999999999 True False 8477.491401596304 8763.377445422024 9375.340504528356 9171.106080688016 8506.778109385175 9059.082108264382 8866.29251455936 8828.183106155015 8331.416637816465 9123.534414267502 8409.410157947787 1.0080958405369458 1.042091809154974 1.1148630318224713 1.0905766169605065 1.0115784519494944 1.0772553530050601 1.0543298933017045 1.049798135700569 0.9907254470091925 1.084919660583423 1.0 13.037788897027585 -8.711390854300689 5.01263976917719 0.995559462063925 1.058383789063932 0.0 0.04004828989492416 0.1252717364466069 6.772964723571228 0.005102283102849806 0.005722511558526546 1.943610093217527e-09 8.711390854300689 0.06282432700000706 RAS(ph)PSKPASAPASR ddPTM_A549_PD325901_60min_R1 4 RASPSKPASAPASR 14 2 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 RAS(0.96)PS(0.04)KPASAPASR;RAS(0.998)PS(0.002)KPASAPASR;RAS(0.968)PS(0.031)KPAS(0.001)APASR;RAS(0.999)PS(0.001)KPASAPASR 179.87 3.0484e-24 5884100000.0 13197.400000000001 14322.2 15154.400000000001 12716.0 16748.1 14698.9 15051.8 15275.9 14362.4 15655.1 15548.2 True False 14537.190332587625 15529.182057765272 16182.868714810185 13501.438439868665 15571.771233808362 14579.197031804762 15624.604485660995 14971.210190788272 13758.798274591389 14666.634314283912 13635.869968160472 1.0660992196707448 1.138847913189672 1.1867866702012349 0.9901413310184314 1.1419712325042837 1.0691798224716826 1.1458458112422738 1.0979284948995405 1.0090150688381418 1.0755921219937017 1.0 13.735119126646216 -8.75455580703641 4.9751880118626834 1.0038928840376151 1.1065929429705077 0.25610189529110405 0.05395771800242444 0.10985849777451351 7.301655394383223 0.007965976129675383 0.008758274417501676 1.7597225241358196e-09 8.75455580703641 0.10270005893289258 RAS(ph)PSNSR ddPTM_A549_MK2206_60min_R1 2 RASPSNSR 8 1 Q14686 Q14686 NCOA6 Nuclear receptor coactivator 6 1 RAS(0.998)PS(0.001)NS(0.001)R;RAS(0.981)PS(0.008)NS(0.011)R 46.406000000000006 0.016776 12059100.0 772.63 787.29 486.08 388.87 675.72 533.5799999999999 497.14 473.42 556.62 765.6500000000001 1252.77 True False 903.0310550101068 827.359698212524 555.0134531301818 484.1431674570376 576.3224831208717 590.0430814382613 587.4639029156084 540.5287347879439 430.5464587394906 592.6891332329814 941.6726343069342 0.9589649546041364 0.8786065008902548 0.5893910823251953 0.5141310789108406 0.6120199973157782 0.6265904518639109 0.6238515185778745 0.5740091780258327 0.4572145807936432 0.6294004005640423 1.0 9.879081794255736 -10.977610880909605 1.2605911781357 0.9990850647005773 0.6261965137985432 0.0 0.17688272153617343 0.34440590735924603 0.9774212867328853 0.10926593943413539 0.025429201460191876 1.0529048328033865e-11 10.977610880909605 -0.3728885509020341 RAS(ph)PSNSR ddPTM_A549_PD325901_60min_R1 2 RASPSNSR 8 1 Q14686 Q14686 NCOA6 Nuclear receptor coactivator 6 1 RAS(0.996)PS(0.003)NS(0.001)R;RAS(0.999)PS(0.001)NSR 52.725 0.011094 15315800.0 504.46000000000004 503.0 583.74 425.41999999999996 493.83000000000004 449.86 478.86 490.47999999999996 537.28 590.17 752.9 True False 555.6724078361759 545.3895752786533 623.3561067137795 451.6972272010793 459.1450844210141 446.19648931060743 497.08327934224656 480.6969916258837 514.699990041529 552.9065654809576 660.2980730263321 0.8415478259528651 0.8259748097991249 0.9440525910620379 0.6840807896512914 0.6953603276723538 0.6757501006561525 0.7528164925031113 0.72799999161396 0.7794964290634894 0.837359047478105 1.0 9.366973625458183 -10.435014531025143 0.7862230506075317 0.9999152736392865 0.7674055181006109 0.23282347394422542 0.08841609482631767 0.4044893370973879 0.45328512491046463 0.054197397987118805 0.016046983077933338 3.672700118338684e-11 10.435014531025143 -0.2325097555386756 RAS(ph)PSPPPKR ddPTM_A549_MK2206_60min_R1 1 RASPSPPPKR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RAS(0.908)PS(0.092)PPPKR 60.161 0.001673 8928600.0 656.11 811.43 677.23 496.08 568.87 768.12 632.39 495.13 949.67 1156.9 992.19 True False 766.8453276505969 852.7283211022472 773.2713974311905 617.6196222698771 485.18997657753215 849.4019485632095 747.2870772112519 565.3161937720308 734.5712613113648 895.5554864980544 745.8018399490699 1.028215923552782 1.143371168352815 1.0368322468659994 0.8281283166478295 0.650561517266658 1.138911039185978 1.0019914636604859 0.757997853438704 0.9849416050804165 1.2007954908762508 1.0 9.542648546127529 -6.009463574439864 23.650054038836238 0.9530369271148087 1.0868706372445425 0.12050761916484665 0.15175336961816058 321.0749599813712 802402.9324019124 0.018514125907000665 0.05337565273572872 9.784450164148465e-07 6.009463574439864 0.13383371012973377 RAS(ph)PSPPPKR ddPTM_A549_PD325901_60min_R1 2 RASPSPPPKR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RAS(0.94)PS(0.06)PPPKR;RAS(0.756)PS(0.244)PPPKR 76.07300000000001 0.00030793 27287000.0 3005.7 2749.8 2521.1000000000004 2701.8 3052.4 2174.77 2539.96 3039.3 2792.7 2563.9 3076.2 True False 3310.836451320608 2981.535296423939 2692.1970066058675 2868.6840497669973 2838.0099542083362 2157.0593941626944 2636.6195677194414 2978.6787772152757 2675.332530875855 2402.0149164420895 2697.8469016384665 1.227214357237936 1.1051536299606852 0.9979057762584053 1.0633235147720121 1.0519536718279845 0.7995484817365511 0.9773051117608489 1.1040948155383663 0.9916546892453615 0.8903451544946042 1.0 11.397592764707364 -4.930698077038935 0.9823134256272567 0.9938289017666185 1.5067471032021602 0.4660379626580877 0.07915391213869234 2.13222068310198 1.0211464952449045 0.010696069537925994 1.3456946230353348 1.1730105629766435e-05 4.930698077038935 0.5129182014355417 RAS(ph)QEANLLTLAQK ddPTM_A549_MK2206_60min_R1 4 RASQEANLLTLAQK 14 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK 111.33 3.9103e-06 160845500.0 5488.12 6454.1900000000005 5672.92 4940.96 8622.5 5481.19 5259.16 5758.860000000001 8277.7 7019.49 8214.43 True False 6414.380484348349 6782.680702925597 6477.425359058737 6151.495421808124 7354.14167215668 6061.205887680547 6214.681296330309 6575.196040769087 6402.8141667706495 5433.782333752469 6174.560324265351 1.038840038397638 1.0984880455812214 1.0490504617151701 0.9962645271491504 1.1910389219546051 0.9816416990632786 1.0064977860702546 1.0648848979463819 1.0369668171526782 0.8800274105993094 1.0 12.592120694139066 RAS(ph)QEANLLTLAQK ddPTM_A549_PD325901_60min_R1 4 RASQEANLLTLAQK 14 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK 202.35 1.2172e-31 241655000.0 9843.6 10015.8 11967.2 11759.5 12917.5 11118.6 11888.3 12667.599999999999 10660.3 13059.900000000001 12938.3 True False 10842.915025524679 10859.866616453157 12779.366156619626 12485.857607237782 12010.219362955775 11028.053807960083 12340.715762027372 12414.934780460051 10212.284663191847 12235.295685183522 11346.971122641242 0.9555779166379659 0.957071847550917 1.1262358931292464 1.1003692062213903 1.0584515667790073 0.971894057785623 1.087577964960469 1.0941188310321723 0.900000938824521 1.078287373162496 1.0 13.470019626007746 -8.759994167045498 24.999998854065264 0.9527782215251827 1.0451830788572232 0.015823023692558724 0.07129644554937235 36.832713586240736 637149.3290322458 0.011557108336515597 0.012763640303647395 1.7378241690902298e-09 8.759994167045498 0.09240485733204051 RAS(ph)QGLLSSIENSESDSSEAKEEGSR ddPTM_A549_MK2206_60min_R1 3 RASQGLLSSIENSESDSSEAKEEGSR 26 2 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RAS(1)QGLLSSIENSESDSSEAKEEGSR;RAS(0.999)QGLLSS(0.001)IENSESDSSEAKEEGSR;RAS(1)QGLLSSIENSESDSSEAKEEGSR 160.11 2.4136999999999996e-41 17685900.0 1913.1799999999998 2136.32 2040.57 2069.77 3071.21 2090.5 2331.58 2188.02 2887.02 3062.94 3236.23 True False 2236.078011239838 2245.049563039514 2329.9535098211304 2576.8637429155074 2619.439077407286 2311.7153224384074 2755.1979055396346 2498.178535530222 2233.1145796235924 2371.019726695783 2432.5847755957816 0.9192189450795951 0.9229070187244196 0.9578097886641936 1.059310971920553 1.0768130688336404 0.9503123367497969 1.1326215362277927 1.0269646347344155 0.9180007217124281 0.974691509411046 1.0 11.24827436847646 -3.063446138638062 16.809005011080025 0.9821857082425494 0.419516828717698 0.0 0.06949220514289028 0.0 0.0 0.009725430225687533 0.0 0.0008640798175373296 3.063446138638062 -0.5626688795248513 RAS(ph)QGLLSSIENSESDSSEAKEEGSR ddPTM_A549_PD325901_60min_R1 2 RASQGLLSSIENSESDSSEAKEEGSR 26 2 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RAS(1)QGLLSSIENSESDSSEAKEEGSR;RAS(1)QGLLSSIENSESDSSEAKEEGSR 201.88 5.605299999999999e-69 29997000.0 2857.6 3550.3 2943.1000000000004 3552.8 3725.0 3347.8 2930.7 3564.4 4083.9 4466.5 4055.3 True False 3147.7014483460666 3849.4962407789353 3142.836464298017 3772.248387005773 3463.368850552369 3320.536626759551 3042.2293922405734 3493.305245782293 3912.267885144806 4184.48442774234 3556.5238086647432 0.8850500144768708 1.0823760637846496 0.883682110222667 1.060656019739123 0.9738073008578149 0.933646674505522 0.8553940746379382 0.982224619801945 1.100025782370236 1.1765658414960414 1.0 11.796252106161152 -8.568192824192884 9.348866976842798 1.0469950536876318 0.9570070466050815 0.3290745343117144 0.07976026367147825 0.35428762235808803 69.4390540786078 0.011956607978353864 0.013566246026838917 2.702758088993064e-09 8.568192824192884 -0.08998800708255028 RAS(ph)SASVPAVGASAEGTR ddPTM_A549_MK2206_60min_R1 1 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RAS(0.574)S(0.414)AS(0.012)VPAVGASAEGTR 79.36 0.00013505 32591000.0 3887.4 4672.9 3908.3 3208.0 5999.7 3888.7 4004.6 4002.7 6033.6 6129.2 6527.3 True False 4543.4980821949575 4910.730650430341 4462.555708666659 3993.9601440125907 5117.152077754528 4300.199652889851 4732.183983617987 4570.094982754643 4666.999233679333 4744.609463085728 4906.3912656845605 0.9260366399989972 1.0008844351195816 0.9095393063895861 0.8140321323222754 1.042956380903422 0.8764485790127602 0.9644938056031153 0.9314575082338045 0.9512081244560453 0.9670263144869145 1.0 12.260446572482339 -10.041160237518385 0.4847641178282859 1.0049708776083341 0.930513363645098 0.09214533635147604 0.057663857353553755 1.5095944388854545 0.6647649656771207 0.04972609250345388 0.015176797334687173 9.095776124834397e-11 10.041160237518385 -0.07445751396323619 RAS(ph)SASVPAVGASAEGTR ddPTM_A549_PD325901_60min_R1 2 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RAS(0.5)S(0.5)ASVPAVGASAEGTR;RAS(0.498)S(0.498)AS(0.003)VPAVGASAEGTR 93.633 1.6423e-06 46336800.0 5150.1 5311.5 5821.9 5894.1 6708.3 6455.299999999999 6365.1 6635.9 7091.6 7132.2 7785.7 True False 5672.934360696762 5759.118745710872 6217.009143928717 6258.165170527676 6237.132150378652 6402.730177047894 6607.327363616363 6503.541768737158 6793.564713703301 6681.87167481113 6828.108257618694 0.8308207993578592 0.8434427997366531 0.9105024275196396 0.9165298695352283 0.9134495112052976 0.9377019132501057 0.9676658767447064 0.9524661184861284 0.99494097887554 0.9785831481736694 1.0 12.737270216708392 -4.297923511933984 0.2472369159671665 1.0094954269158427 0.5580916554715901 0.9177442492078176 0.015372247268225196 2.3415334797151397 0.07458435963173925 0.007598536549665017 0.35033965643901144 5.035892932657453e-05 4.297923511933984 -0.4514037714442526 RAS(ph)SASVPAVGASAEGTRR ddPTM_A549_MK2206_60min_R1 1 RASSASVPAVGASAEGTRR 19 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RAS(0.492)S(0.492)AS(0.016)VPAVGASAEGTRR 47.225 0.0041646999999999995 6775800.0 570.62 564.67 728.04 606.79 782.05 714.47 580.54 524.87 812.47 1149.6 1189.8 True False 666.9267056804254 593.4092910994246 831.2870194554347 755.4535772398381 667.0114809753705 790.0747411731971 686.016603368522 599.2719298469611 628.446842247986 889.9045615681251 894.3398231905214 0.7457195669775624 0.663516569107323 0.9294979356838339 0.8447052872416971 0.7458143578979116 0.8834167065877009 0.7670648064414546 0.6700718388107583 0.7026935689903946 0.9950407423359795 1.0 9.804679307623386 -10.855828615511028 1.109973186462596 0.9996492683654279 0.770687475779349 0.5350964942682253 0.080606320126504 0.3330032645800839 0.7302024913134726 0.058439930423057625 0.01432816792145526 1.393706689242675e-11 10.855828615511028 -0.22896179258607885 RAS(ph)SASVPAVGASAEGTRR ddPTM_A549_PD325901_60min_R1 2 RASSASVPAVGASAEGTRR 19 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RAS(0.487)S(0.487)AS(0.026)VPAVGASAEGTRR;RAS(0.498)S(0.498)AS(0.005)VPAVGASAEGTRR 86.182 6.3351e-06 24971000.0 1808.01 1939.9299999999998 1755.3200000000002 1548.4499999999998 2359.8 2199.4 2232.36 2224.5 2012.6799999999998 2376.84 2378.73 True False 1991.5578442133854 2103.4147092849266 1874.4465707966413 1644.0942397148965 2194.0557888680487 2181.488815608745 2317.3136813942656 2180.130602413509 1928.0940588832352 2226.765916765947 2086.161290011855 0.9546519023953647 1.0082704148311437 0.8985146928816753 0.7880954591509814 1.0517191548768412 1.0456951847650995 1.1108027420933964 1.0450441261907992 0.9242305799242774 1.0673987325080188 1.0 11.026634987728203 RAS(ph)SDLSIASSEEDKLSQNACILESVSEK ddPTM_A549_PD325901_60min_R1 2 RASSDLSIASSEEDKLSQNACILESVSEK 29 2 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RAS(0.453)S(0.453)DLS(0.071)IAS(0.011)S(0.011)EEDKLSQNACILESVSEK;RAS(0.848)S(0.142)DLS(0.008)IAS(0.001)S(0.001)EEDKLSQNACILESVSEK 125.02 8.0948e-22 18370300.0 1947.95 1685.1 1674.1399999999999 1969.26 1306.67 1338.95 1613.56 1812.69 1380.9099999999999 1631.19 1730.27 True False 2145.704449995003 1827.1092908589635 1787.7572078216447 2090.896717686046 1214.894006966784 1328.046035127457 1674.9649087739117 1776.5344759222046 1322.87515494388 1528.1963850193736 1517.4577590852314 1.414012638670415 1.2040594078614744 1.1781265060711528 1.3778945115062053 0.8006114171501935 0.8751782559852226 1.1037967276160823 1.1707307602375385 0.8717706618346651 1.007076721490169 1.0 10.567440641929572 -6.755358263210387 24.99999967170351 0.9556255581661816 1.278890388838937 0.6219324838990757 0.11839345136522904 75.76585102109927 311476.92279013415 0.017553340725909798 0.035813318444606175 1.7564740453260534e-07 6.755358263210387 0.32326483067275535 RAS(ph)SGLPR ddPTM_A549_MK2206_60min_R1 2 RASSGLPR 8 1 Q9UJZ1;Q9UJZ1-2 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial 1 RAS(0.972)S(0.028)GLPR;RAS(0.974)S(0.026)GLPR 69.672 0.0029100000000000003 17285300.0 1006.9000000000001 807.29 1028.33 632.8 1530.49 991.72 888.47 759.21 1243.8200000000002 1401.57 1493.1399999999999 True False 1176.8401036585126 848.3776127856175 1174.1626568823235 787.8360284074716 1305.356948427843 1096.6631521495426 1049.893498458041 866.8303424831128 962.0967559723921 1084.9543635673597 1122.3521294324214 1.0485480205340243 0.7558925497068785 1.0461624530227451 0.7019508474634284 1.163054726049273 0.9771114816738755 0.935440376443155 0.7723336729636472 0.8572147107333674 0.9666791153290064 1.0 10.132309666210032 -11.04311520068484 1.3987048423944801 0.9991200324951357 0.9086217308397448 0.029958666854130733 0.13374097139418412 1.023796225332965 3.6267805902130994 0.08456073342705367 0.019727181283161345 9.054923786923944e-12 11.04311520068484 -0.09049830165539086 RAS(ph)SLNFLNK ddPTM_A549_PD325901_60min_R1 1 RASSLNFLNK 10 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RAS(0.662)S(0.338)LNFLNK 100.38 0.00018952 92422000.0 1927.1 2393.8 2306.0 2653.8 3001.9 3143.7 2651.9 2788.4 3008.3 2640.9 2779.7 True False 2122.7377733439603 2595.5339270418294 2462.499027104489 2817.719198782907 2791.056899992796 3118.0987494904125 2752.8195056753602 2732.783174542517 2881.871612645049 2474.153123301187 2437.8145219701096 0.8707544213119539 1.0646970487911687 1.0101256699030698 1.1558382204179254 1.1449012526749636 1.2790549573765497 1.1292161404677665 1.120997167714806 1.182153763821243 1.014906220716788 1.0 11.251372649170985 -4.775418864817667 1.1101971646797604 1.112774358778103 0.45164502097005205 0.46246665832315126 0.07749089672942958 3.5067324255852075 1.6519817954903802 0.01330775521453773 3.521767404662567 1.6771856394122547e-05 4.775418864817667 -0.6611293378080509 RAS(ph)SLNVLNVGGK ddPTM_A549_MK2206_60min_R1 4 RASSLNVLNVGGK 13 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 RAS(0.5)S(0.5)LNVLNVGGK;RAS(0.5)S(0.5)LNVLNVGGK;RAS(0.5)S(0.5)LNVLNVGGK;RAS(0.5)S(0.5)LNVLNVGGK 107.34 3.5187e-05 215724000.0 6026.75 6082.2 6774.4 5859.639999999999 9984.0 6755.120000000001 6972.1 5711.72 10514.3 8416.7 9077.4 True False 7043.918060109184 6391.758000823352 7735.111785889366 7295.25206304923 8515.366825724828 7469.942314714251 8238.840321675814 6521.373801408884 8132.827837886935 6515.361624347981 6823.231056504997 1.0323434750745826 0.9367641148147408 1.133643536593271 1.0691785171329098 1.2479962579614854 1.0947807941506986 1.207469049992266 0.9557603644671634 1.1919320583660173 0.9548792310259661 1.0 12.73623935607302 -5.7664036927069375 24.998766582262682 1.102607462327134 0.9845537874531752 0.16200679963082787 0.09569765153848499 133.49152457204437 672238.8274380349 0.01273256445008295 0.04143309357575854 1.712364861335122e-06 5.7664036927069375 -0.11805367487395879 RAS(ph)SLNVLNVGGK ddPTM_A549_PD325901_60min_R1 3 RASSLNVLNVGGK 13 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 RAS(0.5)S(0.5)LNVLNVGGK;RAS(0.5)S(0.5)LNVLNVGGK;RAS(0.5)S(0.5)LNVLNVGGK 135.61 1.6821e-08 485894000.0 10122.1 9285.3 11007.800000000001 9807.0 12576.3 10355.7 11360.199999999999 10855.0 11784.5 11036.4 14257.2 True False 11149.688140503818 10067.804817763186 11754.855503278759 10412.756116687011 11692.984073879668 10271.366612621392 11792.518627539961 10638.488509417233 11289.238446702646 10339.559820516199 12503.654783837186 0.8917143293908298 0.805188962092692 0.9401135673126261 0.83277699974147 0.935165299748564 0.8214691456372136 0.9431257365473275 0.8508303126833799 0.9028750906731404 0.8269230076538583 1.0 13.610062231863921 -10.47542077841759 0.41131937352027786 1.0287899942036374 0.8707700122282221 0.0 0.0691586769459816 1.0613089909747853 0.26183346316455586 0.07079745828048974 0.012783820993904722 3.346410556450379e-11 10.47542077841759 -0.15801998197541522 RAS(ph)SLSR ddPTM_A549_PD325901_60min_R1 2 RASSLSR 7 1 Q9Y259-2;Q9Y259 Q9Y259-2 CHKB Choline/ethanolamine kinase 1 RAS(0.57)S(0.43)LSR;RAS(0.5)S(0.5)LSR 52.49 0.019742 24987000.0 1723.29 1846.33 1464.04 1896.96 2340.3 1585.95 1526.15 1881.4299999999998 1854.48 2315.58 2116.47 True False 1898.2371321809521 2001.9267087956987 1563.39855838771 2014.130910891259 2175.925401596702 1573.034549020047 1584.2284733913243 1843.903402696718 1776.5426547279162 2169.3738836206453 1856.1576074087393 1.0226702326377108 1.0785327176987185 0.8422768369170271 1.0851076992880233 1.1722740530823619 0.8474682013754522 0.8534988985137757 0.9933980796333731 0.957107654887147 1.1687444401066605 1.0 10.858103500393339 -7.273617841917175 24.99857601534176 0.9616235529077142 1.033805666888801 0.08910129787264687 0.10901935500019581 1240.4386514085852 2546227.1213595616 0.0136691883998101 0.021947330512997583 5.325766948002388e-08 7.273617841917175 0.07218211398108676 RAS(ph)SREDGRPR ddPTM_A549_PD325901_60min_R1 1 RASSREDGRPR 11 3 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 RAS(0.5)S(0.5)REDGRPR 55.196000000000005 0.0051542 142550000.0 995.71 405.25 815.43 705.34 605.92 893.27 1027.5 719.99 729.86 1090.1 1059.6 True False 1096.7937461970398 439.4018397249984 870.7699833789309 748.9072498566344 563.3622695105214 885.9955052827247 1066.602074769574 705.6292346287714 699.1865223565188 1021.2708999623698 929.2759173578181 1.1802670506253083 0.4728432444201678 0.9370413750253688 0.8059040763543938 0.6062378880024268 0.9534256604882743 1.147777592044149 0.7593323161059263 0.752399270546572 1.0989964131063659 1.0 9.859963209958535 RAS(ph)VCAEAYNPDEEEDDAESR ddPTM_A549_MK2206_60min_R1 2 RASVCAEAYNPDEEEDDAESR 21 1 P31323 P31323 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit 1 RAS(0.998)VCAEAY(0.002)NPDEEEDDAESR;RAS(1)VCAEAYNPDEEEDDAESR 138.95 1.2142e-18 56973000.0 1470.1999999999998 1420.82 1191.66 1137.47 1944.86 1573.77 1081.21 1408.13 2180.83 2258.92 2172.7799999999997 True False 1718.333817061023 1493.1336691871086 1360.6553068571282 1416.1502010629679 1658.773670340464 1740.3052968160218 1277.6518615910713 1607.7367397172654 1686.8754870698901 1748.6284031119246 1633.218760322661 1.0521149149190194 0.9142276010178348 0.8331127096460215 0.8670915589918838 1.0156469608595202 1.0655677849746257 0.7822907087710997 0.9843976684419414 1.032853361748446 1.0706639218168563 1.0 10.673502329263469 -8.513047538877357 24.82885931472349 1.015151537606076 0.9304461344533979 0.2081235694307585 0.0850911546909629 565.422144992451 1427984.605708916 0.013780971864338349 0.016081104769737713 3.0686860645396585e-09 8.513047538877357 -0.08470540315267816 RAS(ph)VCAEAYNPDEEEDDAESR ddPTM_A549_PD325901_60min_R1 2 RASVCAEAYNPDEEEDDAESR 21 1 P31323 P31323 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit 1 RAS(0.996)VCAEAY(0.004)NPDEEEDDAESR;RAS(1)VCAEAYNPDEEEDDAESR 116.72 5.5141e-15 82565000.0 1909.85 1636.25 1710.18 1639.1299999999999 2209.7 2341.8 1820.86 1827.3400000000001 2188.88 1500.41 1900.1 True False 2103.736566042739 1774.142529919874 1826.2430989477707 1740.3753373656748 2054.498295051161 2322.729157221317 1890.1538237128232 1790.892270179502 2096.888985635242 1405.673856538428 1666.399745726302 1.2624441232891712 1.0646560253443944 1.0959213739868887 1.0443924645506535 1.232896428555146 1.3938607247020152 1.1342739511094908 1.074707479266291 1.25833491694474 0.8435394089224154 1.0 10.702518809014403 -10.988399074291905 1.231779751191479 0.9989403660046029 1.1775217208942352 0.38618960457142526 0.11303173428834835 0.5129201082990218 1.3709966976757484 0.077770459993686 0.01737473583839783 1.027072085250344e-11 10.988399074291905 0.17858135488963234 RAS(ph)WAS(ph)ENGETDAEGTQMTPAK ddPTM_A549_MK2206_60min_R1 2 RASWASENGETDAEGTQMTPAK 22 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 2 RAS(0.893)WAS(0.604)ENGET(0.484)DAEGT(0.019)QMT(0.001)PAK;RAS(0.972)WAS(0.851)ENGET(0.165)DAEGT(0.011)QMT(0.001)PAK 43.611999999999995 0.00919 25650000.0 2552.27 2755.3 1736.03 1801.8200000000002 3680.8 2630.0 2075.7799999999997 2255.5699999999997 3685.1000000000004 2931.5 3205.1 True False 2983.0307789894823 2895.5330011621727 1982.225158487471 2243.265980886775 3139.3591959262762 2908.30485434729 2452.9223566684664 2575.303954893419 2850.430733895471 2269.2721139848277 2409.185213740076 1.2381907218991084 1.2018723112894583 0.8227782352234421 0.9311305615246891 1.3030792228102135 1.2071736277313312 1.0181543298036815 1.068952249999682 1.183151348281104 0.9419251376119631 1.0 11.23432959425045 -5.549035026342948 24.999227561960954 1.0790914433763557 1.2291118710987616 0.17135630621304898 0.1327888038709391 264.70482385298055 252995.0239806552 0.018344138561289355 0.07105071576032594 2.824652154326229e-06 5.549035026342948 0.15002042772240598 RAS(ph)WASENGET(ph)DAEGTQMTPAK ddPTM_A549_MK2206_60min_R1 1 RASWASENGETDAEGTQMTPAK 22 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 2 RAS(0.812)WAS(0.316)ENGET(0.728)DAEGT(0.138)QMT(0.006)PAK 41.661 0.031929 8695000.0 1623.3 1331.1 1371.1 1111.8 1859.0 1692.5 1627.8 1527.6 2074.6 1574.3 1986.1 True False 1897.2733541253965 1398.8473044122134 1565.5425970761862 1384.1910499105993 1585.543562602409 1871.5992266094252 1923.550189415512 1744.141978078795 1604.7064124554388 1218.6645366011646 1492.8965564285559 1.270867258656037 0.9370021642749744 1.0486611348487673 0.927184836719021 1.0620585570881695 1.2536697325411725 1.2884685018077913 1.16829392536834 1.074894576952046 0.816308759875879 1.0 10.543898488515126 -4.39799744751521 16.440687228068786 1.0720891113485962 1.0634172827068376 0.0 0.14742739158502136 0.0 0.0 0.01706968840362294 0.0 3.999471003686532e-05 4.39799744751521 -0.008671828641758639 RAS(ph)WASENGETDAEGTQMTPAK ddPTM_A549_MK2206_60min_R1 2 RASWASENGETDAEGTQMTPAK 22 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 RAS(0.918)WAS(0.082)ENGETDAEGTQMTPAK;RAS(0.979)WAS(0.02)ENGETDAEGTQMTPAK 200.62 4.349399999999999e-61 42610000.0 4907.6 4218.4 4055.5 3350.5 6491.700000000001 4367.799999999999 4405.0 4727.0 5793.4 5825.0 6930.0 True False 5735.882900699684 4433.098541756803 4630.630882096468 4171.37265040966 5536.77952950299 4829.997696889011 5205.331480756437 5397.066725830366 4481.204150158751 4509.128454361803 5209.089741729967 1.1011295994287797 0.8510313243873098 0.8889520264933294 0.8007872502162585 1.0629073031988494 0.9272248965488054 0.9992785186741125 1.0360863401132288 0.8602662600069776 0.8656269478790545 1.0 12.346815576585321 -6.7565838331406125 24.99342349448345 0.952382182214158 0.9046917512922443 0.0632226791509235 0.09187184307540795 315.9167332389344 1626130.56951197 0.013101884085063234 0.026601456632643197 1.751524299689236e-07 6.7565838331406125 -0.04769043092191372 RAS(ph)WASENGETDAEGTQMTPAK ddPTM_A549_PD325901_60min_R1 2 RASWASENGETDAEGTQMTPAK 22 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 RAS(0.979)WAS(0.021)ENGETDAEGTQMTPAK;RAS(0.931)WAS(0.069)ENGETDAEGTQMTPAK 217.84 3.932499999999999e-74 73060000.0 9305.6 8643.3 8551.2 8345.8 9288.4 10214.5 8893.8 9066.2 12754.900000000001 13130.3 14973.4 True False 10250.297661579352 9371.701224663993 9131.535854542895 8861.301111312985 8636.014827240442 10131.316498606677 9232.258425874103 8885.367528703693 12218.855909359549 12301.25061716898 13131.766724203046 0.7805726279531845 0.7136664411949302 0.695377556297329 0.6747988520829263 0.6576430276760459 0.7715120677504677 0.7030477025500466 0.676631539024155 0.930480731647409 0.9367551888122297 1.0 13.680773406426114 -8.832117625635739 4.5378957781607285 0.9698857250795366 0.7076940933399174 0.8873556370956275 0.03916036173638542 0.04490215480535208 1.7400797404597117 0.007418875498792017 0.007897404262740552 1.471913790842059e-09 8.832117625635739 -0.26219163173961924 RAS(ph)YDYNQDR ddPTM_A549_MK2206_60min_R1 4 RASYDYNQDR 10 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RAS(1)YDYNQDR;RAS(0.999)YDYNQDR;RAS(1)YDYNQDR;RAS(0.999)YDYNQDR 149.32 1.2663e-08 36562200.0 5152.900000000001 5704.07 6378.33 4984.75 7973.5 5924.04 4907.2 5083.4 8790.1 9388.800000000001 10104.2 True False 6022.583543690486 5994.382798947162 7282.873104229413 6206.013973773933 6800.608712431582 6550.917980740509 5798.774720174346 5803.98751725959 6799.156384905312 7267.863559195209 7595.048278266661 0.792961851332031 0.7892488078186644 0.9588975392124179 0.8171131698441642 0.8954003270646245 0.8625248636649294 0.7634941224491781 0.7641804639830642 0.8952091067493533 0.9569213114803107 1.0 12.890843419974637 -9.654676755018635 1.0148782763115463 0.9815227406375557 0.8359960105091329 0.4643411625715649 0.05879584975120321 0.27256014613543206 0.5828222040314859 0.018291408642270912 0.012149884827793852 2.214742527110392e-10 9.654676755018635 -0.14552673012842288 RAS(ph)YDYNQDR ddPTM_A549_PD325901_60min_R1 3 RASYDYNQDR 10 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RAS(1)YDYNQDR;RAS(1)YDYNQDR;RAS(1)YDYNQDR 153.0 8.622999999999999e-09 49067600.0 8594.0 8293.5 7896.8 8173.1 9240.3 10363.900000000001 8280.5 11148.2 9730.599999999999 10352.2 10700.099999999999 True False 9466.456553431577 8992.422351040785 8432.724335316021 8677.93382454314 8591.293205304444 10279.499834540096 8595.618958763462 10925.840405406281 9321.65672107301 9698.5603252825 9384.055533522445 1.0087809603869855 0.9582661056211104 0.8986225950168341 0.9247530338608033 0.9155202859375635 1.0954218885234508 0.9159812543795729 1.1642983533479905 0.9933505495330319 1.033514805047408 1.0 13.195995835720364 -7.215343656097303 24.997665163958544 1.0101603488659037 0.9388594720013191 0.292180841821312 0.0663717838047545 490.7316505223372 266123.6020536923 0.009099520962693348 0.01576078750360231 6.090547630549766e-08 7.215343656097303 -0.07130087686458453 RASDT(ph)SLTQGIVAFR ddPTM_A549_MK2206_60min_R1 1 RASDTSLTQGIVAFR 15 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 RAS(0.289)DT(0.354)S(0.354)LT(0.004)QGIVAFR 46.746 0.018629 849610.0 102.92 169.55 134.21 163.3 164.32 150.64 167.93 254.93 240.28 293.69 241.3 True False 120.29037984758573 178.1793707933969 153.24299610064537 203.3085073308156 140.14874567338777 166.58062481326084 198.44070727887137 291.067108190382 185.85696364831443 227.34522502343663 181.37855045879382 0.6632006901770543 0.9823618633112645 0.8448793736250506 1.120907112867262 0.7726864357383163 0.9184141365773302 1.09406931953596 1.6047493347704727 1.0246909746394628 1.2534294956507863 1.0 7.502860044889134 -7.707946352305216 5.979419547255929 1.0714510019550763 0.8907326255192674 0.2926328898057293 0.20335426472722054 0.2964903561221491 22.665000134779596 0.03123132938331463 0.04620951467254481 1.9590866613655293e-08 7.707946352305216 -0.1807183764358089 RASEDTTSGS(ph)PPK ddPTM_A549_MK2206_60min_R1 1 RASEDTTSGSPPK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDTTS(0.002)GS(0.998)PPK 79.013 0.00033233 21792000.0 1398.2 1728.2 1570.4 1254.9 2003.7 1418.8 1619.0 1299.8 2203.1 2248.5 2291.7 True False 1634.1819772920178 1816.1579982609762 1793.1063339278264 1562.3505563346014 1708.958384285341 1568.9364742767823 1913.1513433245575 1484.0506304705534 1704.1013676277744 1740.562288348929 1722.607642297628 0.9486675532870228 1.0543074079472734 1.0409255653459 0.9069683182472856 0.9920763976211777 0.9107915440245709 1.1106135235605832 0.8615140174875311 0.9892568253992129 1.0104229457773408 1.0 10.750378421528861 -3.3617065205702006 0.0011805666396668207 1.9383613005126692 0.02270045750290499 0.0005225992802205814 0.06926786807027817 5049954.957059048 591.7054758303775 473613.811428028 486603.66970698803 0.0004348039486242999 3.3617065205702006 -1.9156608430097641 RASEDTTSGS(ph)PPKK ddPTM_A549_MK2206_60min_R1 4 RASEDTTSGSPPKK 14 2 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDT(0.001)T(0.038)S(0.038)GS(0.923)PPKK;RASEDT(0.001)TS(0.001)GS(0.998)PPKK;RASEDTT(0.001)S(0.001)GS(0.997)PPKK;RASEDTTSGS(1)PPKK 127.97 3.9597e-09 994578000.0 19030.5 21734.800000000003 19272.7 18290.399999999998 24010.3 19529.5 18281.0 19466.0 27684.0 28862.5 28173.9 True False 22242.383148945588 22841.008483163223 22005.85866141798 22771.548821087246 20478.416676252076 21596.098727367083 21602.42106690315 22225.36511212479 21413.61820226376 22342.44120412317 21177.543069917167 1.0502815683345739 1.0785485553141914 1.0391129220592847 1.075268681825248 0.9669873700005265 1.0197641273148668 1.0200626671178643 1.0494779795157665 1.0111474277996837 1.055006292767774 1.0 14.370247603135919 -6.741225163301874 24.9999994296452 1.0088237440419678 1.0605211993730577 0.3786767285550471 0.025173552424649383 131.49237025495913 162622.76851235554 0.002939323021470907 0.00611246306502374 1.814574638728233e-07 6.741225163301874 0.051697455331089825 RASEDTTSGS(ph)PPKK ddPTM_A549_PD325901_60min_R1 4 RASEDTTSGSPPKK 14 2 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDT(0.031)T(0.055)S(0.101)GS(0.813)PPKK;RASEDTT(0.001)S(0.002)GS(0.997)PPKK;RASEDT(0.047)T(0.047)S(0.141)GS(0.766)PPKK;RASEDTTSGS(1)PPKK 158.98 1.4518e-19 1494550000.0 27255.300000000003 27487.699999999997 30145.4 29997.9 37312.0 31929.799999999996 31700.4 32434.900000000005 33790.3 35436.0 36038.4 True False 30022.23799170861 29804.184947091533 32191.24812301634 31850.80215282605 34691.33383941211 31669.77429509143 32906.7760691245 31787.960474813182 32370.21119993353 33198.564912454414 31605.905266240086 0.9498933107218076 0.9429941871947245 1.0185200471824956 1.0077484534780135 1.0976219015776059 1.0020207941621455 1.0411591059305598 1.0057601643439575 1.0241823775416374 1.0503912048333426 1.0 14.947906517140943 -5.763090066405545 24.838759787358118 1.0184680801473958 0.9464437276161574 0.5339050079814933 0.028193706749251476 21.04748506486206 316742.51423872565 0.0036232639516798637 0.01219779516748169 1.7254800152382114e-06 5.763090066405545 -0.0720243525312384 RASGQAFELILS(ph)PR ddPTM_A549_MK2206_60min_R1 4 RASGQAFELILSPR 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR 117.26 1.4021e-06 51207900.0 1651.78 1562.81 1488.5900000000001 949.23 1874.14 1471.1 1293.75 1481.41 1847.3799999999999 1579.29 1877.77 True False 1930.56008185625 1642.350353698783 1699.6944457600755 1181.7913926125536 1598.4564886582461 1626.7708255628527 1528.8076284287486 1691.4044041278523 1428.9513796596602 1222.5272921354594 1411.4678851844556 1.3677676283821063 1.1635761400863576 1.2042034137659132 0.8372782725113955 1.1324781140517088 1.1525383203106039 1.0831331300385616 1.1983300660835183 1.0123867462084835 0.8661389359033806 1.0 10.462980588503033 -2.000000003527808 0.632812580101098 1.0330012001516222 27.751288395486668 0.4178223931545083 0.11297173090143149 117.61593180535263 0.7441076751086741 0.016838969052441748 4395.673180056714 0.009999999918769223 2.000000003527808 26.718287195335044 RASGQAFELILS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RASGQAFELILSPR 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 RASGQAFELILS(1)PR;RASGQAFELILS(1)PR 131.18 3.755699999999999e-09 54718000.0 1114.16 897.08 970.54 971.07 1094.1399999999999 1007.86 1067.24 1008.1099999999999 868.28 1264.72 1497.6599999999999 True False 1227.2687029987587 972.680079902534 1036.4066807311328 1031.050788440018 1017.2913809780861 999.652322314918 1107.8544022161364 988.0024552030043 831.7892111250354 1184.8653633615343 1313.4573144489518 0.9343803483356041 0.7405494409314797 0.7890676532308529 0.7849899475968775 0.7745142303348326 0.7610847427762145 0.8434643364721189 0.752215122893058 0.6332822559018635 0.9020965891522961 1.0 10.359153600296576 -11.037324890440372 1.348859746728431 0.9993455809286742 0.7622542147946094 0.40683684719785607 0.07534533618041907 0.25797231266381376 0.8403457669548969 0.0550035889014967 0.012478718568146216 9.1764585989557e-12 11.037324890440372 -0.23709136613406478 RASLS(ph)EIGFGK ddPTM_A549_PD325901_60min_R1 1 RASLSEIGFGK 11 1 Q00537;Q00537-2;F5H6Z0 Q00537 CDK17 Cyclin-dependent kinase 17 1 RAS(0.118)LS(0.882)EIGFGK 164.13 8.6398e-14 14658000.0 7024.8 6265.8 6489.9 6530.3 8516.6 6977.9 8138.5 7694.9 7520.0 7789.3 8601.7 True False 7737.952524615563 6793.840955827009 6930.343640939042 6933.661799612636 7918.423396674985 6921.074295915372 8448.215071058079 7541.419182967732 7203.960551504428 7297.482268669747 7543.745430668881 1.0257441208391176 0.9005925528991 0.9186873688451798 0.9191272244453044 1.049667366091499 0.917458623110205 1.1198966281009566 0.9996916322637702 0.9549580666146198 0.9673553191498273 1.0 12.881065276673462 -6.72456613500114 24.999471647454563 0.9901237951188218 0.9365523874549432 0.1810708459244882 0.05837329332852627 241.9499552297245 164037.13518312867 0.007950081568460741 0.01654905450570263 1.8855318160744455e-07 6.72456613500114 -0.05357140766387858 RASLSDLTDLEDIEGLTVR ddPTM_A549_PD325901_60min_R1 1 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;Q8WZ73-2;Q8WZ73;J3KSU7;K7EN88;Q8WZ73-3 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 0 92.993 3.852e-06 1713400.0 226.23 117.18 243.68 156.71 242.82 218.2 270.2 378.84 285.51 254.54 295.99 False True 249.19670305827637 127.05516984324579 260.2175901668785 166.3896207857674 225.76516088352398 216.42305154397943 280.4826088591132 371.28373900576935 273.51100758776994 238.4683009599318 259.5851064352026 0.9599807418862092 0.48945477492161593 1.00243651779704 0.6409829249094513 0.8697153853850983 0.8337267669784544 1.0805034722942668 1.4302967689652444 1.0536467648079166 0.9186517063121957 1.0 8.020063801584573 -7.695230302609614 4.429975093292491 1.0666916204759105 0.7859892167946927 0.40216035971276776 0.1790246283938095 0.17223714982269347 6.644932664598609 0.026209571739896822 0.03891393804054389 2.01729632518727e-08 7.695230302609614 -0.2807024036812178 RASPAPSDSSPGEPFVGGPVS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 RASPAPSDSSPGEPFVGGPVSSPR 24 1 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 RASPAPSDS(0.001)S(0.001)PGEPFVGGPVS(0.499)S(0.499)PR 48.226000000000006 0.0043237 5312000.0 2433.2 2320.5 2426.1 2420.2 2946.8 2685.0 2347.4 2560.0 3645.4 3144.4 4516.4 True False 2843.8646739714895 2438.603538343129 2770.1574609922945 3013.1491086469073 2513.329623602355 2969.124917841245 2773.892194762238 2922.887839671193 2819.7227205075965 2434.0778561193574 3394.8532337011875 0.8376988571229069 0.7183237007522939 0.8159873992467628 0.887563880150974 0.7403352812581636 0.8745959584839552 0.817087515662067 0.8609762008723301 0.8305875177506382 0.7169905997572804 1.0 11.72913348988663 -14.99999988652496 0.1901213423692243 1.8265887120677378 0.7833307461515758 0.0 0.09850401171417118 19.061969700424704 0.21839567869115856 5.8334473576513615 0.04331480928714186 1.0000002612859677e-15 14.99999988652496 -1.0432579659161618 RASQGLLSSIENSES(ph)DSSEAKEEGSR ddPTM_A549_MK2206_60min_R1 2 RASQGLLSSIENSESDSSEAKEEGSR 26 2 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RASQGLLSSIENS(0.006)ES(0.987)DS(0.006)S(0.001)EAKEEGSR;RASQGLLSSIENS(0.017)ES(0.981)DS(0.002)S(0.001)EAKEEGSR 174.89 7.0916e-49 35172000.0 2970.6000000000004 3094.2 3015.3 2734.2 3722.3 3068.2 3191.2 3271.2 3682.8999999999996 3950.6000000000004 4438.2 True False 3471.9646558029376 3251.681563603235 3442.9148807262955 3404.079122742901 3174.754600900992 3392.8748874936728 3770.999732438126 3734.9026176298466 2848.729030382792 3058.156716189138 3336.0724519113933 1.0407341884357713 0.9747035205246197 1.032026411402932 1.0203852499643835 0.9516443802298195 1.017026739197386 1.1303710536255118 1.1195508105616665 0.8539170151267611 0.9166937350047586 1.0 11.703934905842214 -8.76472508402727 24.999997833024707 0.9310163731156652 1.0328494780892465 0.4153185570750749 0.05906820974193688 79.82343631965163 607352.4457473878 0.012625769416052347 0.013715593785282258 1.718996197358788e-09 8.76472508402727 0.10183310497358133 RASQGLLSSIENSES(ph)DSSEAKEEGSR ddPTM_A549_PD325901_60min_R1 4 RASQGLLSSIENSESDSSEAKEEGSR 26 2 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RASQGLLSSIENS(0.001)ES(0.899)DS(0.042)S(0.058)EAKEEGSR;RASQGLLSSIENS(0.007)ES(0.952)DS(0.031)S(0.009)EAKEEGSR;RASQGLLSSIENS(0.014)ES(0.97)DS(0.007)S(0.01)EAKEEGSR;RASQGLLSSIENS(0.028)ES(0.95)DS(0.021)S(0.002)EAKEEGSR 187.32 5.4078999999999995e-58 83899600.0 6460.91 6453.15 6498.9 6389.1 8023.0 7467.599999999999 6685.4 6975.9 7161.9 7415.9 8186.799999999999 True False 7116.816826929439 6996.979597831896 6939.9544350604365 6783.740196301106 7459.492157847426 7406.786341474886 6939.81655539125 6836.760202012317 6860.910249178137 6947.658808394584 7179.875500401082 0.9912173026582257 0.9745265913651332 0.9665842304191427 0.9448269953876155 1.0389444994458086 1.0316037292096678 0.966565026789612 0.9522115253433575 0.9555750999853512 0.9676572815234017 1.0 12.809743112483226 -8.27774076844731 0.0013367455473453358 1.4635775563127476 0.4966106682321665 0.0 0.02999198465486407 706405.7147687412 636.531853734337 229952.67171131005 230493.19745221944 5.275446602980998e-09 8.27774076844731 -0.9669668880805811 RASS(ph)ASVPAVGASAEGTR ddPTM_A549_MK2206_60min_R1 2 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RAS(0.244)S(0.715)AS(0.041)VPAVGASAEGTR;RAS(0.134)S(0.83)AS(0.036)VPAVGASAEGTR 68.916 0.00063134 28710000.0 2962.1 2970.4 2805.4 3197.8 4284.6 3532.4 3238.1 3222.5 4715.8 4568.7 4280.6 True False 3462.030063607982 3121.5806723957908 3203.2479044836496 3981.261143554695 3654.3410157752974 3906.1962233826494 3826.4208553546923 3679.299243492353 3647.6788295851557 3536.6274969000474 3217.6088814501163 1.0759636087428095 0.9701554127327472 0.9955367549333732 1.2373353288857205 1.1357318898648596 1.2140059178423823 1.1892125476823634 1.1434886523044907 1.1336613503942141 1.09914772963523 1.0 11.65177325364274 RASS(ph)ASVPAVGASAEGTR ddPTM_A549_PD325901_60min_R1 1 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RAS(0.315)S(0.676)AS(0.009)VPAVGASAEGTR 115.58 2.2453e-10 44277000.0 3174.9 3411.2 3530.8 3280.4 4019.0 3224.8 3146.8 3730.6 3997.7 3731.5 3557.6 True False 3497.2135107621516 3698.6737956074394 3770.421320425209 3483.0228576710556 3736.71930479731 3198.538297979034 3266.553195995034 3656.190256400916 3829.690571376231 3495.892453178225 3120.037753484496 1.1208882029893457 1.185458025780847 1.2084537490658107 1.1163399717779612 1.1976519516868334 1.0251601264782348 1.0469595094953283 1.1718416715687618 1.227450073993235 1.120464792220533 1.0 11.60734777094042 -11.010240502435446 1.2998812720553106 1.000185411911693 1.1518473763257584 0.09193721126932863 0.07049194509844127 0.36099768767825635 1.0883168615727241 0.04790463409677339 0.010928645687548966 9.766961989606429e-12 11.010240502435446 0.15166196441406532 RASS(ph)LNFLNK ddPTM_A549_MK2206_60min_R1 4 RASSLNFLNK 10 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RAS(0.21)S(0.79)LNFLNK;RAS(0.19)S(0.81)LNFLNK;RAS(0.128)S(0.872)LNFLNK;RAS(0.044)S(0.956)LNFLNK 112.84 5.1571000000000005e-05 113647600.0 10042.6 10172.7 11791.3 9101.3 13684.0 10711.6 9110.5 11008.099999999999 16355.499999999998 14124.1 15118.699999999999 True False 11737.54536200315 10690.446978885226 13463.483644449298 11331.11890857288 11671.101727085188 11845.094402215373 10765.759921777868 12568.531885892367 12651.00536436659 10933.456000386534 11364.3095351072 1.0328428071888511 0.9407036077167518 1.1847163791919977 0.9970793978787901 1.026996113668871 1.042306562103303 0.9473307541051866 1.1059652895818284 1.113222525775496 0.9620871348681895 1.0 13.472222412096126 RASS(ph)LNFLNK ddPTM_A549_PD325901_60min_R1 3 RASSLNFLNK 10 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RAS(0.107)S(0.893)LNFLNK;RAS(0.428)S(0.572)LNFLNK;RAS(0.02)S(0.98)LNFLNK 129.34 1.0871e-06 109162000.0 13532.3 13296.7 13822.099999999999 13278.3 17838.199999999997 15679.0 14564.400000000001 15811.9 15320.300000000001 15443.9 16680.3 True False 14906.089134047255 14417.25957377271 14760.150825039449 14098.470433792703 16585.306370449212 15551.315422355881 15118.656211945483 15496.519250304405 14676.441068778373 14468.76951832753 14628.728845133643 1.018959971973633 0.9855442483349276 1.0089838277335714 0.9637522564705043 1.1337489775105403 1.063066763147308 1.033490768199919 1.0593209713815592 1.0032615426910865 0.9890653980602474 1.0 13.836516792327494 -4.85470878019166 18.480961160826535 1.0162015063741223 2.3569464601266574 0.0 0.04580705893590032 5837.23148929673 1329453.2741759007 0.006227713514719704 262731.32036737655 1.397305021582921e-05 4.85470878019166 1.340744953752535 RASS(ph)LNVLNVGGK ddPTM_A549_MK2206_60min_R1 2 RASSLNVLNVGGK 13 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 RAS(0.2)S(0.8)LNVLNVGGK;RAS(0.178)S(0.822)LNVLNVGGK 101.32 0.00011569 12586700.0 4616.8 6394.9 6054.0 4989.200000000001 7181.9 5683.9 5395.5 5056.4 8552.3 7085.1 7163.1 True False 5396.002970077088 6720.373095173658 6912.548233315753 6211.554223973698 6125.452023805403 6285.366525332537 6375.792509516763 5773.1601845755595 6615.217705216744 5484.570989184343 5384.304578497251 1.0021726838460359 1.248141333239603 1.2838330619188396 1.1536409453469905 1.137649613706475 1.1673497354577165 1.184144101910415 1.0722202097613946 1.2286113478117984 1.0186219797237168 1.0 12.394544307065548 -10.91696718774859 1.0449159979468496 0.9949612311148963 1.1721548424295072 0.38250561458472565 0.07525017218089819 0.4336426571784799 0.8001763272253851 0.05920231622372782 0.012460033999571388 1.2106896013277238e-11 10.91696718774859 0.17719361131461087 RASS(ph)LNVLNVGGK ddPTM_A549_PD325901_60min_R1 1 RASSLNVLNVGGK 13 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;Q07866-7;H0YJK1 Q07866-6 KLC1 Kinesin light chain 1 1 RAS(0.041)S(0.959)LNVLNVGGK 140.77 2.2631e-12 18860000.0 9210.8 9514.7 8931.2 8610.8 9664.8 10232.0 9503.1 10539.0 9497.9 9546.5 12330.0 True False 10145.873635367423 10316.537160842552 9537.324939668528 9142.669559454314 8985.977789749948 10148.67398440879 9864.74567079586 10328.791377314445 9098.736292836955 8943.732360784119 10813.488166309828 0.9382609458969582 0.9540434133903655 0.8819841288015393 0.8454875447072606 0.830997144635196 0.9385199140484277 0.9122630476935426 0.9551766477624224 0.841424723724644 0.8270904099797267 1.0 13.400544355766476 RASS(ph)PFR ddPTM_A549_MK2206_60min_R1 5 RASSPFR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.064)S(0.936)PFR;RAS(0.295)S(0.705)PFR;RAS(0.179)S(0.821)PFR;RAS(0.09)S(0.91)PFR;RAS(0.139)S(0.861)PFR 82.645 0.006218899999999999 690699000.0 12808.279999999999 12800.5 11103.12 11237.73 13429.2 10538.8 9566.64 9840.2 14119.400000000001 16196.099999999999 16767.0 True False 14970.00453161908 13451.990774643928 12677.70937236419 13990.974354480873 11453.782469553666 11654.008820910734 11304.774655406067 11235.078484348622 10921.378444048656 12537.389761320028 12603.291154341472 1.1877853449781126 1.0673395234553558 1.0059046654648682 1.1101048276315812 0.9087929755243468 0.9246798061073328 0.8969700467097356 0.8914400490127897 0.8665497218388512 0.9947710965164251 1.0 13.621512899944696 -5.798872633551905 0.7327942278910852 0.9269497898694214 1.2126014628028545 0.6409387122011753 0.05833614414802785 0.8349609614125304 0.4788122994832241 0.0108928796696611 0.1677380579779295 1.5890126933353841e-06 5.798872633551905 0.2856516729334331 RASS(ph)PFR ddPTM_A549_PD325901_60min_R1 4 RASSPFR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.267)S(0.733)PFR;RAS(0.19)S(0.81)PFR;RAS(0.021)S(0.979)PFR;RAS(0.385)S(0.615)PFR 84.522 0.008212299999999999 976468000.0 8182.3 9802.0 8929.3 9009.51 10847.8 9160.499999999998 9389.23 10462.97 9295.000000000002 11540.9 10280.0 True False 9012.961072509104 10628.04894012199 9535.295994242895 9566.00697061821 10085.887950878394 9085.899925154088 9746.542285633794 10254.277855308823 8904.363474233198 10812.205604417686 9015.625170289139 0.9997045021582293 1.1788476937957193 1.0576411301643645 1.0610475468903529 1.118711987285839 1.0077947733559884 1.0810722608292747 1.1373895499894613 0.987659014882007 1.1992740825172226 1.0 13.138211820557515 -8.784115682460982 24.99452489523369 0.9941722962715994 1.0810581260113188 0.0 0.07933340888483333 157.91430425086446 174057.2588425112 0.007897572170830359 0.008410463010858175 1.6439337723707565e-09 8.784115682460982 0.08688582973971937 RASS(ph)PFRR ddPTM_A549_MK2206_60min_R1 1 RASSPFRR 8 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.023)S(0.977)PFRR 63.426 0.0032493 1107100000.0 1712.2 1261.0 1331.8 1335.2 1504.1 1194.6 1179.0 1277.2 2060.0 2077.5 2402.0 True False 2001.177500729075 1325.179513833521 1520.6692661265138 1662.3240599394064 1282.8488824692224 1321.0117790886975 1393.2090387768076 1458.2470112609572 1593.41328914403 1608.1913071135868 1805.5171081724948 1.1083680634600153 0.7339612058147923 0.8422347588086286 0.920691392186239 0.7105160492041497 0.7316528728026271 0.7716398988802624 0.8076616968403934 0.8825246141017452 0.8907095368048676 1.0 10.81819637526638 -9.679733336045565 0.9051081556247272 0.9818808514305638 0.8217473508498285 0.1161639329200258 0.11038862194724193 0.46780697012524036 0.8022865896990331 0.034105852965391294 0.021182070021904174 2.0905793869694794e-10 9.679733336045565 -0.16013350058073528 RASS(ph)PFRR ddPTM_A549_PD325901_60min_R1 1 RASSPFRR 8 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.013)S(0.987)PFRR 54.093999999999994 0.0077710999999999995 1951400000.0 2114.6 1677.5 2319.3 1860.7 2409.2 2522.9 2470.1 2343.5 2392.3 1844.5 2339.7 True False 2329.272635313757 1818.8688121867629 2476.7016450838864 1975.6312130436943 2239.986103288799 2502.3543388648295 2564.1010071905853 2296.757054059816 2291.7599504473483 1728.0379552156617 2051.931732580301 1.1351608819776378 0.8864178000208313 1.20700976828768 0.9628152738587171 1.091647479164436 1.219511496962973 1.2496034670540586 1.1193145549592176 1.1168792382607504 0.8421517771659278 1.0 11.002767018186882 -4.9153792507103455 20.63388908509341 1.078549494967076 4.290098209616934 0.01682554151691662 0.12838054512013178 2314.6868133705243 593098.5550154861 0.014574623268278037 17633.436882274156 1.2151244212521993e-05 4.9153792507103455 3.211548714649858 RASS(ph)PSLIER ddPTM_A549_MK2206_60min_R1 1 RASSPSLIER 10 1 A1L170;A1L170-2 A1L170 C1orf226 Uncharacterized protein C1orf226 1 RAS(0.075)S(0.896)PS(0.029)LIER 48.277 0.01317 5091500.0 1763.3 1791.3 1836.2 1155.8 1698.5 1497.6 1495.1 1641.2 1827.0 1995.0 2020.6 True False 2060.9019314540205 1882.4695187390864 2096.600770732473 1438.9710518858333 1448.652899989344 1656.0750379735746 1766.7403171121339 1873.8451259642059 1413.1874171194872 1544.328114412326 1518.8292542769937 1.3569016567534242 1.2394214250470148 1.380405838792271 0.9474212113268946 0.9537957580879914 1.0903628787173407 1.163225103899617 1.2337431088369508 0.9304452183416793 1.0167884968396073 1.0 10.568743976849902 -2.0000000000069837 0.2815636948215751 0.973612960238619 4.128200776430267 0.4105603329455588 0.12078677012347132 29.14682532759899 0.3626902438685898 0.04723893168384383 46.093370630317374 0.009999999999839193 2.0000000000069837 3.1545878161916483 RASVRGS(ph)S(ph)EEDEDARTPDR ddPTM_A549_PD325901_60min_R1 2 RASVRGSSEEDEDARTPDR 19 3 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 2 RAS(0.141)VRGS(0.877)S(0.976)EEDEDART(0.006)PDR;RAS(0.19)VRGS(0.819)S(0.822)EEDEDART(0.169)PDR 57.238 0.0022247 32692000.0 1622.28 2046.8899999999999 1746.96 1569.9 1932.33 1836.25 1754.6 1822.45 1547.63 1462.96 1447.02 True False 1786.9726713405853 2219.3886038610794 1865.5192109238767 1666.869157498412 1796.6098069766083 1821.296188806747 1821.3722631539613 1786.0998050656326 1482.5884931282988 1370.5884559296837 1269.0457134155429 1.4081231688109015 1.7488641901541584 1.4700173454768382 1.3134823591280702 1.4157171707717018 1.4351698836008537 1.4352298297055606 1.4074353557039934 1.16827036051997 1.08001503920678 1.0 10.30952832336834 -8.87663619607322 0.4851495270008197 0.9971054518938103 1.5176140146646997 0.7097010937898695 0.10636194733233709 0.28249240116617613 0.16008245404377422 0.047456859313860664 0.041331075076207584 1.328506867989596e-09 8.87663619607322 0.5205085627708894 RASWAS(ph)ENGETDAEGTQMTPAK ddPTM_A549_MK2206_60min_R1 2 RASWASENGETDAEGTQMTPAK 22 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 RAS(0.258)WAS(0.74)ENGET(0.002)DAEGTQMTPAK;RAS(0.065)WAS(0.931)ENGET(0.003)DAEGTQMTPAK 238.59 2.9676999999999994e-98 42647000.0 10497.9 8958.9 7885.5 6892.1 12737.9 8624.1 7955.4 8530.1 12914.099999999999 12937.0 12654.7 True False 12269.688870986884 9414.869743444202 9003.782473374851 8580.664809398131 10864.171783794096 9536.696537785738 9400.79320363445 9739.267797335642 9989.076969580055 10014.522714863284 9512.188738047651 1.2898912341709066 0.9897690219061588 0.9465521260486313 0.9020704956238377 1.1421316463516613 1.0025764627272438 0.9882891795483797 1.0238724299466118 1.0501344374744066 1.0528095047994954 1.0 13.215561625559785 -5.258321275223276 24.488516134727668 1.0139640027347725 1.2898913714246187 0.6519561871809872 0.05875695761516607 100.86278607756405 792086.6575313675 0.007746525754228315 0.07588399248906841 5.5166918354496874e-06 5.258321275223276 0.27592736868984624 RAT(ph)GDGSSPELPSLER ddPTM_A549_MK2206_60min_R1 1 RATGDGSSPELPSLER 16 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 RAT(0.738)GDGS(0.225)S(0.037)PELPSLER 43.12 0.043056 1015300.0 421.92 638.61 349.97 517.25 739.23 436.91 408.47 713.46 565.11 641.44 603.39 True False 493.1297810463794 671.1125212761496 399.60100845945055 643.9762732202345 630.4902462520597 483.14352620261417 482.6837116786789 814.5951398796133 437.11348729523456 496.53825850057234 453.55161028318133 1.0872627720106358 1.4796828102035202 0.8810485938082196 1.4198522475053255 1.3901179754568709 1.065244870150404 1.0642310615484498 1.7960362644749719 0.9637568854012372 1.0947778538159123 1.0 8.825122916191386 RAT(ph)ISSPLELEGTVSR ddPTM_A549_MK2206_60min_R1 2 RATISSPLELEGTVSR 16 1 Q96GS4 Q96GS4 C17orf59 Uncharacterized protein C17orf59 1 RAT(0.993)IS(0.006)S(0.001)PLELEGTVSR;RAT(0.999)IS(0.001)SPLELEGTVSR 86.539 1.5195e-05 15941600.0 510.35 535.37 428.6 596.01 787.5 502.27 486.77 615.42 822.6 820.2 834.26 True False 596.4846031404529 562.6180462498429 489.3819248098992 742.0324767559056 671.6597931949419 555.4198780201574 575.2098081470622 702.6576696447053 636.282413422272 634.9162503463605 627.0902175953306 0.9511942403243996 0.897188363752961 0.7804011465630989 1.1832946136543765 1.0710736260095395 0.8857096832892664 0.9172680293958156 1.1205049128961844 1.0146584902283922 1.0124799152202373 1.0 9.29252920395726 -6.24120656594508 24.998085663806823 1.0141421808084783 0.8783539776489233 0.3603531760313826 0.08764833062954401 742.6076895963536 917507.0097538666 0.011901337315129488 0.03144181250019534 5.738434568722273e-07 6.24120656594508 -0.13578820315955498 RAT(ph)ISSPLELEGTVSR ddPTM_A549_PD325901_60min_R1 2 RATISSPLELEGTVSR 16 1 Q96GS4 Q96GS4 C17orf59 Uncharacterized protein C17orf59 1 RAT(0.999)IS(0.001)SPLELEGTVSR;RAT(1)ISSPLELEGTVSR 127.07 8.1746e-10 30197000.0 995.45 833.01 722.02 633.31 916.26 933.18 647.09 909.38 1128.6100000000001 765.65 739.74 True False 1096.5073511884416 903.2106761488495 771.0206190589697 672.4281203486335 851.9050585254005 925.5804914748423 671.7153640512346 891.2417025051914 1081.1784465469968 717.3067283333531 648.7566695982185 1.6901673656280398 1.3922179431437935 1.1884588709299442 1.036487410241308 1.3131349525130798 1.4266989995618289 1.035388760576804 1.3737688478133816 1.6665392391519942 1.1056637441239539 1.0 9.341533655070775 -5.321263517813429 3.250472858996291 1.2884522748141403 1.7218584889559712 0.28632221639433664 0.19663518703422067 0.3874125745428108 6.590078124379273 0.03505320618098768 0.38385561010690583 4.772396100638247e-06 5.321263517813429 0.4334062141418309 RAT(ph)LDEEDLVDSLSEGDAYPNGLQVNFHSPR ddPTM_A549_PD325901_60min_R1 1 RATLDEEDLVDSLSEGDAYPNGLQVNFHSPR 31 1 E9PN99;E9PHZ1;B4DKB2;A0A3B3ISF9;P42892-3;P42892-4;P42892 E9PN99 ECE1 Endothelin-converting enzyme 1 1 RAT(0.994)LDEEDLVDS(0.004)LS(0.001)EGDAY(0.001)PNGLQVNFHSPR 51.533 0.0028768 1864700.0 291.43 236.25 166.18 285.1 379.5 411.76 211.51 280.75 286.91 233.23 424.12 True False 321.0157590605732 256.15961661944687 177.45797412151958 302.70997949092134 352.8452292039262 408.406763078593 219.55912879271298 275.1502210058857 274.85217045640104 218.50381799671914 371.9559287181933 0.8630478351745425 0.6886827090032009 0.4770940867458733 0.8138329197604077 0.9486210649199086 1.0979977237787655 0.5902826432941699 0.7397387694668232 0.7389374633806107 0.5874454501900551 1.0 8.5389878831879 -10.729184856886617 0.893098958338445 1.0058040341337904 0.7703889716813012 0.0 0.19982875356093519 0.8137199597647368 1.1085134992585235 0.12827650163297402 0.030103890725238322 1.8655854377725565e-11 10.729184856886617 -0.23541506245248922 RAT(ph)PEPGDEGEPGR ddPTM_A549_MK2206_60min_R1 5 RATPEPGDEGEPGR 14 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR 156.83 3.4213999999999997e-19 347199000.0 2319.84 2806.02 2024.61 2440.52 2314.17 2053.66 1452.65 1826.5200000000002 2965.26 2930.27 3672.19 True False 2711.3722773573986 2948.8344325195385 2311.7301418324078 3038.447509559105 1973.758658562462 2270.976938090822 1716.577701593833 2085.434803482902 2293.6333445471973 2268.3199718390993 2760.283875711887 0.9822802289341077 1.068308393374585 0.8374972451832348 1.1007735603916748 0.7150564026873586 0.8227331101969101 0.6218844795994475 0.7555146127660732 0.8309411088943384 0.8217705402688307 1.0 11.43060093029654 -6.7505793563093714 24.999971665383338 0.8635122628165374 0.9908845286379215 0.31171854625762985 0.11941278264480373 322.9697978132385 743477.2700864932 0.020064954572596622 0.04144978077971019 1.7759087363282e-07 6.7505793563093714 0.12737226582138417 RAT(ph)PEPGDEGEPGR ddPTM_A549_PD325901_60min_R1 6 RATPEPGDEGEPGR 14 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR;RAT(1)PEPGDEGEPGR 132.62 1.1075e-09 470625000.0 3080.36 2887.94 3213.95 2784.5 3556.9700000000003 3251.62 2904.16 2954.2799999999997 3453.43 2879.25 3196.78 True False 3393.075879558819 3131.316839026311 3432.067974051377 2956.4922409416704 3307.1406980803386 3225.139884791174 3014.6793980173297 2895.3545678121745 3308.294346726321 2697.4536636241205 2803.5963260580656 1.2102583556776085 1.1168929028484744 1.224166240393445 1.0545356381953106 1.1796065886312066 1.1503581506421112 1.075290108635594 1.032728763731519 1.1800180774875941 0.9621405330548479 1.0 11.453062923483222 -10.9483403992887 0.9518843160774852 0.9911159295720118 1.1368121682819117 0.48525989080054655 0.06067453289495838 0.511545076958852 0.7351961793088386 0.05577684780416891 0.010134637616568609 1.1263143068449273e-11 10.9483403992887 0.1456962387098999 RAT(ph)PHPGELK ddPTM_A549_MK2206_60min_R1 2 RATPHPGELK 10 1 Q9BTT6 Q9BTT6 LRRC1 Leucine-rich repeat-containing protein 1 1 RAT(1)PHPGELK;RAT(1)PHPGELK 79.875 0.0004683 22364000.0 2892.5 2391.1000000000004 2550.35 1999.8 3498.5 2680.8999999999996 2261.9300000000003 2593.8 3369.6 3463.6000000000004 3813.0 True False 3380.6832851646122 2512.7967767861487 2912.027979325543 2489.751089774434 2983.8752844349247 2964.5910585626075 2672.8934021038367 2961.479093179352 2606.390980145499 2681.17035442533 2866.1268665535877 1.1795302310639724 0.8767221040036147 1.016015031751595 0.8686813967758058 1.0410827654753905 1.034354442979497 0.9325802822252223 1.0332686692059874 0.90937739377866 0.935468134964081 1.0 11.48488675528686 -8.75607184063214 24.94417460898282 0.9572059926018901 0.9905380190867499 0.056396720687830526 0.08443466261410239 398.1997255361799 1850524.2347876432 0.013571919954860474 0.01517013616637315 1.7535904003820897e-09 8.75607184063214 0.03333202648485978 RAT(ph)PHPGELK ddPTM_A549_PD325901_60min_R1 1 RATPHPGELK 10 1 Q9BTT6 Q9BTT6 LRRC1 Leucine-rich repeat-containing protein 1 1 RAT(1)PHPGELK 95.428 0.00021241 18141000.0 1862.7 2278.4 1728.8 2130.9 2523.0 1948.4 2174.0 2062.0 2213.3 2496.6 2778.5 True False 2051.799932752735 2470.4087640454945 1846.1267641189252 2262.520853374972 2345.7931838774844 1932.5328763899604 2256.732759658446 2020.8717923922943 2120.2826979580786 2338.964249927579 2436.7621143626807 0.8420189729063355 1.0138079336856458 0.7576146859956281 0.9284947595168598 0.9626681119387853 0.793074081790459 0.9261194379036378 0.8293266628206916 0.8701229740321307 0.9598656496427515 1.0 11.250749701426763 -10.6616601068044 0.9035774442955173 1.0008765331722091 0.8818256582598523 0.21385720933536156 0.07217405730301703 0.5891373349411269 0.8473150118661678 0.04599388666334663 0.011922030018005335 2.1794147870105282e-11 10.6616601068044 -0.11905087491235689 RAT(ph)PHPSELK ddPTM_A549_MK2206_60min_R1 2 RATPHPSELK 10 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RAT(0.991)PHPS(0.009)ELK;RAT(1)PHPSELK 56.122 0.0060271000000000005 5684500.0 988.34 1253.96 1118.32 1043.68 1626.19 1487.97 817.97 1349.54 1470.48 1291.37 1562.69 True False 1155.1476294069457 1317.7812079037922 1276.9145920518122 1299.3816468525758 1386.9796052008662 1645.425997765452 966.584561024822 1540.8414277929157 1137.418627874036 999.6486201045832 1174.630944950072 0.98341324513296 1.1218682885625875 1.0870772624725018 1.1062041677335568 1.1807790448257092 1.400802528521323 0.8228836173440901 1.3117664185651174 0.96831999255935 0.8510320832277013 1.0 10.197991835049145 RATGDGSS(ph)PELPSLER ddPTM_A549_MK2206_60min_R1 2 RATGDGSSPELPSLER 16 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 RATGDGS(0.152)S(0.848)PELPSLER;RAT(0.046)GDGS(0.14)S(0.813)PELPSLER 79.676 0.00013399 6269200.0 1144.71 1480.6100000000001 1245.23 1267.5900000000001 1451.27 1029.26 1145.04 1331.78 1845.8600000000001 1850.8500000000001 1740.37 True False 1337.909062527495 1555.9667248033697 1421.82233838318 1578.1496069042773 1237.7901054857446 1138.1756100325072 1353.0789463621682 1520.563893405196 1427.775657232719 1432.741699528849 1308.1880972315419 1.0227191833948424 1.1894059639406522 1.08686383968186 1.2063629154278674 0.9461866440347705 0.8700397232180722 1.03431528633048 1.1623434708075202 1.0914146522615935 1.0952107747814663 1.0 10.353354277664007 -6.758062062118887 24.999999078110783 1.033669570766132 1.1280232358054896 0.22778218180056864 0.08630224453817936 112.69200332209603 834167.1176250487 0.01283645456117488 0.025885590241876793 1.7455726869817287e-07 6.758062062118887 0.09435366503935749 RAVS(ph)PSNPK ddPTM_A549_MK2206_60min_R1 5 RAVSPSNPK 9 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 RAVS(0.999)PS(0.001)NPK;RAVS(0.996)PS(0.004)NPK;RAVS(0.999)PS(0.001)NPK;RAVS(0.986)PS(0.014)NPK;RAVS(0.951)PS(0.049)NPK 142.72 2.979e-05 979004800.0 12804.599999999999 12809.9 13146.7 11081.6 15940.0 12107.3 12357.800000000001 12687.9 18707.500000000004 18791.5 19293.300000000003 True False 14965.703437586442 13461.869194493274 15011.09974544635 13796.592497471931 13595.247115590313 13388.486449824697 14603.052298045826 14486.448680064119 14470.28111973881 14546.48709873644 14502.24114200848 1.0319579774629077 0.9282612985587743 1.0350882734920097 0.9513420968782194 0.9374583543649065 0.9232012017123628 1.00695141909793 0.9989110330058838 0.9977962011556205 1.003050973728453 1.0 13.823988247694254 RAVS(ph)PSNPK ddPTM_A549_PD325901_60min_R1 5 RAVSPSNPK 9 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 RAVS(0.999)PS(0.001)NPK;RAVS(0.997)PS(0.003)NPK;RAVS(0.995)PS(0.005)NPK;RAVS(1)PSNPK;RAVS(1)PSNPK 120.86 5.6074e-05 1414585600.0 16579.4 14315.300000000001 14488.8 14829.399999999998 18259.2 16353.800000000001 16078.3 16014.900000000001 16066.000000000002 15940.1 16385.3 True False 18262.528482890797 15521.70057054972 15472.097096232235 15745.378357989008 16976.73678282037 16220.620074885106 16690.168504883357 15695.470256053988 15390.801891019963 14933.639365645515 14370.011974974563 1.2708777497677155 1.0801452773721294 1.0766934031215116 1.095710872434181 1.1814003225874432 1.1287826414573199 1.1614582182637951 1.0922377993412753 1.0710361214606579 1.0392224718846799 1.0 13.810773643587511 -9.283744856446509 0.6319989087195186 1.0078638440219678 1.1387521625943333 0.428501138871478 0.053511045241824075 0.4014064119861628 0.35776699822061964 0.019874571938576235 0.013698415236758769 5.203015786021748e-10 9.283744856446509 0.1308883185723655 RAVSEGCAS(ph)EDEVEGEA ddPTM_A549_MK2206_60min_R1 1 RAVSEGCASEDEVEGEA 17 1 Q9BYX2-6;Q9BYX2-5;Q9BYX2-4;Q9BYX2-2;Q9BYX2 Q9BYX2-6 TBC1D2 TBC1 domain family member 2A 1 RAVS(0.026)EGCAS(0.974)EDEVEGEA 59.513000000000005 0.0035325000000000005 1654600.0 388.5 624.27 554.35 450.24 686.37 477.65 215.95 387.73 361.43 495.98 436.35 True False 454.0693020869324 656.0426765272418 632.965165698478 560.5488202120418 585.4058822288408 528.1946059615909 255.18531969792335 442.69191487332523 279.56668208511013 383.93777352693 327.99225235265084 1.3843903288262005 2.0001773573050063 1.929817430620057 1.7090306743262667 1.7848161901075148 1.6103874471817903 0.7780224010399889 1.349702353326784 0.8523575788141652 1.1705696423405991 1.0 8.357517926494845 -7.659101555182301 4.823154460530977 0.9567573467486994 1.7733130314102616 0.7356419296497136 0.20961798925492073 0.0666539154289632 2.596831942609878 0.029439626484339673 0.043890617563709065 2.1922922310004482e-08 7.659101555182301 0.8165556846615623 RAVSEGCAS(ph)EDEVEGEA ddPTM_A549_PD325901_60min_R1 2 RAVSEGCASEDEVEGEA 17 1 Q9BYX2-6;Q9BYX2-5;Q9BYX2-4;Q9BYX2-2;Q9BYX2 Q9BYX2-6 TBC1D2 TBC1 domain family member 2A 1 RAVS(0.251)EGCAS(0.749)EDEVEGEA;RAVS(0.055)EGCAS(0.945)EDEVEGEA 65.71600000000001 0.001912 5594100.0 1297.46 1119.3600000000001 1033.15 1103.82 1334.6 1182.28 1373.27 1374.66 1150.75 1237.3600000000001 1513.28 True False 1429.17718406043 1213.6923955942616 1103.2657718356477 1172.0004544428925 1240.8623001200526 1172.6519036636846 1425.5305413321778 1347.241327900092 1102.3879793409203 1159.2328784308215 1327.1561534722896 1.0768719116595427 0.9145060981850791 0.8313006490977953 0.8830916025793519 0.9349783722688072 0.8835824635975431 1.0741241997804911 1.015133994877131 0.8306392404968325 0.8734713510523053 1.0 10.374122413159354 -5.258959393958992 23.613232260142173 0.9247479628525891 1.0768720326902332 0.26123555352353156 0.07385693578754204 125.95711459549426 1199128.134655795 0.011396188708937278 0.10590681741272197 5.508591987073575e-06 5.258959393958992 0.15212406983764415 RAVVVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 RAVVVSPK 8 1 G3V5E1;O75909;O75909-1 G3V5E1 CCNK Cyclin-K 1 RAVVVS(1)PK;RAVVVS(1)PK 73.887 0.0033703 12686000.0 1014.5 1176.1 1103.7 1105.0 1961.8 1350.2 1094.6 1296.1 2017.4 1366.1 1283.4 True False 1185.7227978563521 1235.9584664707404 1260.2212562125192 1375.7250496053346 1673.2218187807455 1493.0772678097767 1293.4746512681036 1479.8261441397783 1560.4621211258084 1057.4970612023444 964.6963599619392 1.2291150325301665 1.2811891054709728 1.3063398065088994 1.4260705302750516 1.7344543715773535 1.5477173230638956 1.3408101294371382 1.5339812666009882 1.6175681653731693 1.0961967983833447 1.0 9.913931112559583 -10.89830768402005 1.1346675337992456 0.998525424763824 1.4607805090662793 0.5105460608315822 0.14916797539707483 0.31742622344059623 0.7220309241442815 0.11566116087833261 0.02726354142503707 1.2638406387619596e-11 10.89830768402005 0.4622550843024553 RAVVVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 RAVVVSPK 8 1 G3V5E1;O75909;O75909-1 G3V5E1 CCNK Cyclin-K 1 RAVVVS(1)PK;RAVVVS(1)PK 57.785 0.006679699999999999 25021000.0 4103.7 3783.8999999999996 3962.2 3577.5 4648.4 3604.3 3864.8 3811.9 3711.8999999999996 4386.5 5106.0 True False 4520.304603015728 4102.782532598205 4231.098718644152 3798.474049908002 4321.912420109433 3574.9477758018543 4011.877078899709 3735.8686641223003 3555.9017514799575 4109.535641395226 4477.994369600812 1.0094484784755744 0.9162098461869984 0.9448646803504869 0.8482534224907063 0.9651446749127348 0.7983368179448025 0.8959093620426649 0.8342727470770205 0.7940835691128718 0.9177179116823159 1.0 12.128636998883394 -4.27685927918512 0.8902968467612621 0.889869615318046 1.524641799458414 0.2480227361375823 0.06260168403167547 15.534130109407611 2.4733118959121936 0.01245088131749297 14.572009218394935 5.286165072216586e-05 4.27685927918512 0.6347721841403681 RAVVVS(ph)PKEENK ddPTM_A549_MK2206_60min_R1 2 RAVVVSPKEENK 12 2 G3V5E1;O75909;O75909-1 G3V5E1 CCNK Cyclin-K 1 RAVVVS(1)PKEENK;RAVVVS(1)PKEENK 75.535 0.0002533 243660000.0 24490.0 25452.0 24372.0 21207.0 30821.0 25116.0 23470.0 24412.0 34189.0 34435.0 34091.0 True False 28623.313276985766 26747.39808571831 27828.316079017415 26402.715952018403 26287.27172833182 27773.758449348494 27734.195199399222 27872.47575861452 26445.246088614218 26656.109583853842 25625.263836264978 1.116995846750188 1.043790153991128 1.0859718852781008 1.0303392823863602 1.0258341883344813 1.0838428289679873 1.0822989131588834 1.0876951721046977 1.0319989779456942 1.040227712548661 1.0 14.645279238150424 -9.142464260270224 1.8133702761094608 1.0105960367278843 1.067138283962261 0.31090640761602717 0.028265261166051766 0.2050551469611971 1.3893356113786475 0.005579568541403903 0.005243656858589606 7.203370280482475e-10 9.142464260270224 0.05654224723437662 RAVVVS(ph)PKEENK ddPTM_A549_PD325901_60min_R1 3 RAVVVSPKEENK 12 2 G3V5E1;O75909;O75909-1 G3V5E1 CCNK Cyclin-K 1 RAVVVS(1)PKEENK;RAVVVS(1)PKEENK;RAVVVS(1)PKEENK 104.78 3.558e-05 326305000.0 26949.0 24906.1 27535.300000000003 26631.4 30551.7 30363.4 28600.4 29655.4 29351.8 30929.9 33693.6 True False 29684.842641194762 27005.024454965554 29404.01104121001 28276.36109370227 28405.853989643172 30116.13053735317 29688.8038727394 29063.899782788754 28118.245919634 28976.980835470255 29549.500801328228 1.0045801734782758 0.9138910547602787 0.9950764054832467 0.9569150180848832 0.9612972544147463 1.0191756111155512 1.0047142275718213 0.9835665237864984 0.9515641603789836 0.9806250545582064 1.0 14.850846137785371 RAYS(ph)SDR ddPTM_A549_PD325901_60min_R1 1 RAYSSDR 7 1 J3KR82;J3KR84;O00444-3;O00444-2;O00444 J3KR82 PLK4 Serine/threonine-protein kinase PLK;Serine/threonine-protein kinase PLK4 1 RAY(0.01)S(0.848)S(0.142)DR 43.282 0.03781 6735700.0 228.83 357.69 330.74 266.97 220.26 314.69 175.44 245.97 172.75 395.29 314.15 True False 252.06065314425746 387.8337916131643 353.1860053011877 283.46013056713883 204.78969745574906 312.127268975137 182.11646520445166 241.0639353902678 165.48991825430724 370.3313219393865 275.5115415609272 0.9148823737698707 1.4076861877214604 1.2819281664215996 1.0288502941153697 0.7433071453032448 1.1329008839584767 0.6610121092301974 0.8749685549451235 0.6006641947437634 1.34415901359795 1.0 8.105968946335016 -6.529630071762703 3.729077873188201 0.8217968051537984 1.2184459544269892 0.17026782483382263 0.23717907619620315 0.15888967213907063 4.829994056274386 0.02812970393234598 0.06451917317276748 2.9537241117733714e-07 6.529630071762703 0.39664914927319084 RCAT(ph)PVIIDEILPSK ddPTM_A549_PD325901_60min_R1 1 RCATPVIIDEILPSK 15 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 RCAT(1)PVIIDEILPSK 80.638 0.00023653 1582300.0 430.65 311.99 778.98 602.18 496.78 447.96 649.37 663.35 482.34 649.23 798.64 True False 474.36927097222605 338.28249222900035 831.8462671872749 639.3752909499929 461.88788659796154 444.3119622806647 674.082130698899 650.1189638619918 462.06892718253255 608.2375070017151 700.4123429960812 0.6772714326293364 0.48297620053633616 1.1876522101666176 0.9128555447995156 0.6594513806284333 0.6343576990377947 0.9624075552630154 0.9281946133059926 0.659709857776047 0.8683991838292293 1.0 9.452060697621484 -11.047298024760922 1.3362453500484692 1.0004998987229698 0.7805288896091952 0.06376194590121353 0.19135347968069757 0.6975543670376336 2.212580847552703 0.13835813290799007 0.03057711195213549 8.968131655525594e-12 11.047298024760922 -0.21997100911377465 RCPAPGDTQHSEEAEPEPS(ph)QEAESGSWER ddPTM_A549_PD325901_60min_R1 1 RCPAPGDTQHSEEAEPEPSQEAESGSWER 29 1 P98088 P98088 MUC5AC Mucin-5AC 1 RCPAPGDTQHSEEAEPEPS(0.372)QEAES(0.314)GS(0.314)WER 53.818999999999996 0.002604 4005400.0 0.0 363.25 178.78 263.9 407.53 267.43 137.22 0.0 268.07 376.32 290.25 True False 0.0 393.86235232598597 190.9130858914748 280.20050363961457 378.90649870217646 265.2521387461338 142.4419821896652 0.0 256.8039501385361 352.5590909768271 254.55109004634448 0.0 1.5472821281349767 0.7499990899929616 1.1007633225557991 1.4885282896772958 1.0420389034587951 0.5595811126313845 0.0 1.0088503258492487 1.3850229080246286 1.0 7.991811433341841 -6.2338718497221794 23.87272695308762 0.943253430813883 0.8439127006678581 0.019015363986414235 0.5033744768443529 2875.044591616762 2489700.2073667487 0.06573691748214744 0.17386421101439678 5.836172908606314e-07 6.2338718497221794 -0.09934073014602496 RCPAPGDTQHSEEAEPEPSQEAES(ph)GSWER ddPTM_A549_MK2206_60min_R1 2 RCPAPGDTQHSEEAEPEPSQEAESGSWER 29 1 P98088 P98088 MUC5AC Mucin-5AC 1 RCPAPGDTQHSEEAEPEPS(0.023)QEAES(0.488)GS(0.488)WER;RCPAPGDTQHSEEAEPEPS(0.044)QEAES(0.529)GS(0.427)WER 75.53399999999999 4.359e-06 5548500.0 229.07 416.34000000000003 396.58000000000004 575.98 581.96 545.69 441.0 447.86 710.8 459.73 759.8299999999999 True False 267.7314157761996 437.52992766807944 452.821007328768 717.0951258567245 496.3544549177501 603.4345536002938 521.1239916035391 511.34552651372667 549.8049349143579 355.8766737036486 571.1432407588284 0.4687640449364123 0.7660598890862675 0.7928326468980779 1.2555433990674258 0.8690542398055645 1.0565380285312715 0.9124225840634427 0.8953017212185621 0.9626393095082065 0.6230953083342564 1.0 9.157708803692705 -5.4626056050533895 1.5882712492130182 0.9814487228584651 0.4014147222044658 0.42890440055163126 0.1528460292597832 0.28532538881003705 0.8962154985218491 0.013906513083285752 0.225832037380422 3.446627865864274e-06 5.4626056050533895 -0.5800340006539992 RCPAPGDTQHSEEAEPEPSQEAESGS(ph)WER ddPTM_A549_MK2206_60min_R1 2 RCPAPGDTQHSEEAEPEPSQEAESGSWER 29 1 P98088 P98088 MUC5AC Mucin-5AC 1 RCPAPGDTQHSEEAEPEPSQEAES(0.075)GS(0.925)WER;RCPAPGDTQHSEEAEPEPSQEAES(0.109)GS(0.891)WER 135.88 3.4448e-28 18375400.0 1214.67 1253.6799999999998 1063.29 886.11 1599.19 1387.29 1249.04 864.11 2119.8 1779.62 1997.3400000000001 True False 1419.6766001697147 1317.4869570997685 1214.0805105719032 1103.2069897789888 1363.9512694341838 1534.092106991427 1475.9744001643637 986.6002387258891 1639.6686846250082 1377.6026060002312 1501.3453542203376 0.9456029528309066 0.8775375721490486 0.8086617160795667 0.7348122713257366 0.9084860226196898 1.0218116056236075 0.9831011872220771 0.6571440980934328 1.0921329193285465 0.9175787583634498 1.0 10.552040162694313 -8.829971865972402 24.999999657653873 1.043507441988777 0.8715200320858191 0.21315441527112244 0.10897973749070569 39.975063590747354 14581.969329152114 0.018228816504604454 0.019406053991946625 1.4792042093813503e-09 8.829971865972402 -0.17198740990295802 RCPAPGDTQHSEEAEPEPSQEAESGS(ph)WER ddPTM_A549_PD325901_60min_R1 2 RCPAPGDTQHSEEAEPEPSQEAESGSWER 29 1 P98088 P98088 MUC5AC Mucin-5AC 1 RCPAPGDTQHSEEAEPEPSQEAES(0.219)GS(0.781)WER;RCPAPGDTQHSEEAEPEPSQEAES(0.254)GS(0.746)WER 158.31 2.2882e-46 24360000.0 1673.87 1684.35 1989.2800000000002 1967.2399999999998 1994.75 1656.05 1291.9 1286.88 1935.02 1750.27 2042.56 True False 1843.8000501620334 1826.2960857268383 2124.2845033124117 2088.7519468737987 1854.6456415139176 1642.5636778616265 1341.0639614548068 1261.2121688621705 1853.6978386133112 1639.757653497053 1791.338068854647 1.0292864770863324 1.0195150304010137 1.185864656284922 1.1660288938141719 1.035340940808425 0.9169478985682784 0.7486381184944402 0.704061500612539 1.0348118374989574 0.9153814581440163 1.0 10.806821919157334 -7.010027070121783 6.29623744830629 0.962636452612031 1.1009368996547335 0.34808356154164855 0.11553045934647256 0.20553881000494276 35.708034903708764 0.019782172692429757 0.03601090045032573 9.771763104279356e-08 7.010027070121783 0.1383004470427025 RCPS(ph)QSSSR ddPTM_A549_MK2206_60min_R1 1 RCPSQSSSR 9 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 RCPS(1)QSSSR 64.55 0.0026028 3344500.0 465.99 289.14 259.63 107.37 248.7 410.41 313.41 353.69 573.07 484.71 442.2 True False 544.637719638326 303.8559909832074 296.44943802705126 133.67565482002243 212.1165594508978 453.8393137918907 370.35254015524947 403.82664063019695 443.2705600047427 375.21367435428493 332.3895359008645 1.6385525439668616 0.9141563080789425 0.8918735580035456 0.40216565319279884 0.6381565498925988 1.365383878773033 1.114212392852546 1.2149198365577871 1.3335875896434617 1.1288372040273638 1.0 8.376731154489608 -7.266251334990901 24.98693154110913 1.1753595220465234 0.8701616324559179 0.194666845019415 0.2961944783224427 535.3463150139089 2779878.934005485 0.04591151232152132 0.07483669206871282 5.416873142812592e-08 7.266251334990901 -0.30519788959060545 RCPT(ph)PEIQK ddPTM_A549_MK2206_60min_R1 2 RCPTPEIQK 9 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RCPT(1)PEIQK;RCPT(1)PEIQK 113.24 0.00015178 56223000.0 8771.0 9454.5 9071.7 7331.9 11386.400000000001 11045.7 8740.8 10620.9 12551.7 12304.1 11809.7 True False 10251.3303696383 9935.693666565445 10358.203470130578 9128.215829141493 9711.475643472875 12214.548642457743 10328.89021725218 12126.445100142108 9708.759990946175 9524.59526443142 8877.02555886124 1.1548159123418542 1.1192593285537429 1.1668552040824975 1.0282966708403254 1.0940010906895123 1.3759731299032834 1.1635530560055285 1.3660482353841177 1.0936951714929648 1.0729489513437034 1.0 13.115860635749625 -9.154832974738323 2.922662364663474 1.03480447260755 1.179870976341536 0.23363279197434184 0.10178768601812735 0.22805196743682443 4.049459999582228 0.02009210067698863 0.01926258120448528 7.001111999131507e-10 9.154832974738323 0.145066503733986 RCPT(ph)PEIQK ddPTM_A549_PD325901_60min_R1 2 RCPTPEIQK 9 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RCPT(1)PEIQK;RCPT(1)PEIQK 102.87 0.00041641 76177000.0 12907.6 12688.3 13537.6 12777.2 10638.8 11046.2 12281.0 11993.8 8987.400000000001 10986.900000000001 12905.8 True False 14217.970049927095 13757.587570592717 14456.342944201973 13566.418624873373 9891.567389867532 10956.243409555937 12748.360175421069 11754.574250045922 8609.690832525392 10293.185258963917 11318.468416606771 1.2561743803663483 1.2154990467091116 1.2772349060047052 1.1986090454578067 0.8739316156375319 0.96799699449447 1.1263326190596883 1.038530463432604 0.7606763137575234 0.9094150268477552 1.0 13.466391129480876 -6.69274030618515 0.8211153135120038 0.9068546280851343 1.289401288350465 0.5827362763412371 0.10538342316745797 0.4102782382105256 0.4904997319452131 0.021876832717677527 0.09115327252348766 2.0288955696767266e-07 6.69274030618515 0.3825466602653308 RCPT(ph)PEIQKK ddPTM_A549_MK2206_60min_R1 2 RCPTPEIQKK 10 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RCPT(1)PEIQKK;RCPT(1)PEIQKK 66.267 0.0017813 45636000.0 4333.2 5141.700000000001 4249.8 4013.1 5667.0 4768.8 4664.6 4125.9 6822.3 6506.299999999999 6806.700000000001 True False 5064.538223431391 5403.390568023646 4852.485543763676 4996.309680154904 4833.391807029504 5273.431250726755 5512.097440439607 4710.75896003882 5277.059942974428 5036.522311178404 5116.40853463685 0.9898619684385425 1.056090523546741 0.9484163570820275 0.9765267269669914 0.9446844938805431 1.030690027003688 1.0773372382451556 0.9207159530260571 1.0313992534509326 0.9843862696034463 1.0 12.320915749695391 -7.300002630130508 24.981778760753595 1.0135306115450762 0.9848762741766434 0.05760026722747802 0.04516917629229376 1046.9120346101026 678201.371513054 0.006485584841180281 0.010368021480639904 5.011841983968084e-08 7.300002630130508 -0.028654337368432814 RCPT(ph)PEIQKK ddPTM_A549_PD325901_60min_R1 2 RCPTPEIQKK 10 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RCPT(1)PEIQKK;RCPT(1)PEIQKK 88.021 0.00024613 71179000.0 7534.1 7872.2 9266.0 8193.8 7267.099999999999 7987.2 8933.900000000001 9287.7 5824.6 7406.1 8389.5 True False 8298.956285688722 8535.617921488303 9894.846480984479 8699.912416530024 6756.683966133998 7922.154891347715 9273.88445331766 9102.449537440305 5579.812317592114 6938.477582067064 7357.644685422246 1.1279365395466165 1.1601019465373184 1.344838858634912 1.1824317140194636 0.9183215899948342 1.0767243092132375 1.2604420096137658 1.2371417656896444 0.7583693635882466 0.9430297165360974 1.0 12.845028292183011 -8.754743072146828 24.999990354867116 0.8858966410002238 1.1622225665668853 0.501254572408922 0.11659635959217962 101.96124161770962 380661.6934611375 0.023285759603811747 0.026109563439975416 1.758963906170188e-09 8.754743072146828 0.27632592556666147 RCS(ph)DNTEVEVSNLENK ddPTM_A549_PD325901_60min_R1 1 RCSDNTEVEVSNLENK 16 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 RCS(0.846)DNT(0.154)EVEVSNLENK 110.67 1.8887e-07 23528000.0 3634.3 6853.0 2710.1 4363.7 3013.4 3301.0 3113.4 2922.6 6097.9 2952.6 6239.9 True False 4003.251460569745 7430.52636060559 2894.023683155194 4633.235838318252 2801.7491796656404 3274.117750443062 3231.882140717853 2864.3064502646525 5841.626469018467 2766.1723321061304 5472.431857985135 0.7315306182804953 1.357810668718202 0.5288368605142812 0.8466502568794229 0.5119751606550293 0.598293014040113 0.5905751272173505 0.5234065082208709 1.0674644510181739 0.5054740568527778 1.0 12.417966369927791 -8.780594410952238 24.93258347202921 1.0318582576611872 0.7167125166621864 0.0 0.2783047889114118 220.10176047810384 286487.8011635087 0.03980671469039919 0.04240980837631452 1.6573170147803183e-09 8.780594410952238 -0.31514574099900083 RCS(ph)DNTEVEVSNLENKQPVESTSAK ddPTM_A549_PD325901_60min_R1 1 RCSDNTEVEVSNLENKQPVESTSAK 25 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 RCS(0.997)DNT(0.003)EVEVSNLENKQPVESTSAK 204.58 4.749399999999999e-69 19234000.0 4813.0 3853.6 4700.8 4701.2 5185.1 5917.5 4390.5 4970.5 4754.6 4955.4 5120.8 True False 5301.61221685667 4178.356396210378 5019.824556206757 4991.582446800137 4820.916463623922 5869.309841940875 4557.582880073788 4871.359478218184 4554.780696566886 4642.515198306144 4490.974063425743 1.1805038599605198 0.9303897856455446 1.117758527506971 1.1114698896730049 1.0734678926082455 1.3069124334830224 1.014831708156701 1.0846999803205901 1.0142077491965007 1.033743489216414 1.0 12.132812674854588 -8.587292021807537 1.677272876052776 1.0052390160828748 1.1060985524019538 0.1625412919842073 0.08879199055863661 0.4081689000032633 2.2435509591889793 0.01574361701853147 0.01804265885245293 2.5864731726617273e-09 8.587292021807537 0.10085953631907896 RCS(ph)DPSLNEK ddPTM_A549_MK2206_60min_R1 1 RCSDPSLNEK 10 1 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 RCS(0.999)DPS(0.001)LNEK 67.01899999999999 0.0020027 7928300.0 1754.8 1895.6 1760.7 1637.8 2452.7 1209.2 1794.1 2032.8 2580.9 2362.1 2461.0 True False 2050.96733925907 1992.077943237766 2010.3937354474788 2039.061073523635 2091.9110790720424 1337.1567413980029 2120.0647467934455 2320.955625188908 1996.3302708504025 1828.4999694503024 1849.865779855333 1.1087114327934993 1.0768770172036777 1.0867781637674814 1.1022751465152774 1.13084478985045 0.7228398708486699 1.1460640928009616 1.2546616357054923 1.0791757394455526 0.9884500753310321 1.0 10.853204882018906 -10.495107913107901 1.13258844149879 1.0052263043843197 1.076273988187057 0.06267715014355857 0.12319924200875233 1.2268690456575597 3.0573946631943842 0.05665466744312305 0.021642750506021775 3.198100349814772e-11 10.495107913107901 0.0710476838027374 RCS(ph)QVK ddPTM_A549_MK2206_60min_R1 2 RCSQVK 6 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 RCS(1)QVK;RCS(1)QVK 92.47 0.01535 17595100.0 5079.1 4262.5 2827.5 2682.7 6893.200000000001 5702.4 5231.1 5957.0 6761.799999999999 5490.799999999999 6392.299999999999 True False 5936.327907927248 4479.44304339047 3228.4820167988587 3339.9616204309777 5879.219411366826 6305.824183053228 6181.523157544833 6801.422992547385 5230.263096375779 4250.424466473781 4804.915491495016 1.2354697847308447 0.9322626071820302 0.6719123411251379 0.6951134991537119 1.2235843526849517 1.312369425479992 1.2864998704943915 1.4155135516090356 1.0885234309809722 0.8845992138669833 1.0 12.230295341868562 -6.772201844574264 24.995106731989335 1.1215712744254525 0.8720320990466806 0.30624114308590145 0.19988736093937123 233.62780991220674 542585.5739682104 0.030605005179967917 0.05825014545479012 1.6896554575780837e-07 6.772201844574264 -0.2495391753787719 RCTVDGS(ph)PHELESR ddPTM_A549_MK2206_60min_R1 1 RCTVDGSPHELESR 14 1 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16 F5GYK2 STRN4 Striatin-4 1 RCT(0.095)VDGS(0.905)PHELESR 59.003 0.0037719999999999997 2908200.0 488.15 485.57 409.67 456.18 932.93 596.71 356.54 619.38 928.79 688.67 736.1 True False 570.537785878342 510.28343896284105 467.7673661616227 567.9441204786981 795.6972328448984 659.8534561359595 421.318702871487 707.179011771697 718.4205479728561 533.0989686979129 553.3060546735106 1.0311432182230489 0.9222444516063429 0.8454043873379232 1.026455640023359 1.4380779428022263 1.1925650380336419 0.7614568814362507 1.2780973672680704 1.2984143981521665 0.9634793695009874 1.0 9.111933900650447 -6.527588374687896 24.989112522478916 1.149605623044248 0.9325400180024115 0.19458071204160077 0.1780759410821872 148.68791932721413 788932.0821914021 0.02626236442947715 0.05482676843118465 2.967642795674981e-07 6.527588374687896 -0.21706560504183647 RCTVDGS(ph)PHELESR ddPTM_A549_PD325901_60min_R1 2 RCTVDGSPHELESR 14 1 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16 F5GYK2 STRN4 Striatin-4 1 RCT(0.007)VDGS(0.993)PHELESR;RCT(0.053)VDGS(0.947)PHELESR 84.035 0.000113 9733000.0 1621.32 1285.4099999999999 1306.85 974.55 1293.3600000000001 997.24 1192.72 1324.21 1439.05 1286.23 1360.73 True False 1785.9152128472997 1393.736011846787 1395.5406997274508 1034.745740136364 1202.5188554497752 989.1188080738684 1238.1096122814272 1297.7975927273515 1378.5717329311774 1205.0172182906151 1193.3688363781657 1.496532470436795 1.1679004590707505 1.169412722359057 0.8670795722107028 1.0076673856335812 0.8288458504378334 1.0374911549048391 1.0875075275688642 1.1551933408241968 1.0097609234943672 1.0 10.220824292635605 -5.179447425089393 1.5190714434112396 1.0419066615368753 1.732079678021268 0.6684848676531914 0.09842884014244291 0.7204021071470579 1.3019258422975695 0.01572021797026219 0.7846072714397513 6.615346168303747e-06 5.179447425089393 0.6901730164843927 RDAGGPRPES(ph)PVPAGR ddPTM_A549_MK2206_60min_R1 4 RDAGGPRPESPVPAGR 16 2 E9PS47;E9PLE4;Q9BVG9 E9PS47 PTDSS2 Phosphatidylserine synthase 2 1 RDAGGPRPES(1)PVPAGR;RDAGGPRPES(1)PVPAGR;RDAGGPRPES(1)PVPAGR;RDAGGPRPES(1)PVPAGR 92.31 2.5827999999999996e-06 193507000.0 3072.7099999999996 2538.2999999999997 2643.87 2272.26 3247.18 2144.32 2176.36 2476.0699999999997 3801.0099999999998 4070.38 4157.710000000001 True False 3591.308327453119 2667.4886280441137 3018.8105215752425 2828.9638020056263 2769.524123513334 2371.2305191155824 2571.7764407398586 2827.06050514635 2940.0873039657045 3150.8783309983146 3125.2358600415737 1.1491319338071802 0.8535319404688481 0.9659464618888267 0.9052000964714368 0.886180834836732 0.7587365003177837 0.8229063520043084 0.9045910874415548 0.9407569334388073 1.0082049714341879 1.0 11.6097493580438 -9.394470379629444 1.2439753850196593 0.9849553733349746 0.899287234603776 0.12580232615166198 0.09356688357712661 0.5867441516494858 1.8841935602127746 0.022562424929242198 0.018215941574920427 4.032084457021405e-10 9.394470379629444 -0.0856681387311986 RDAGGPRPES(ph)PVPAGR ddPTM_A549_PD325901_60min_R1 4 RDAGGPRPESPVPAGR 16 2 E9PS47;E9PLE4;Q9BVG9 E9PS47 PTDSS2 Phosphatidylserine synthase 2 1 RDAGGPRPES(1)PVPAGR;RDAGGPRPES(1)PVPAGR;RDAGGPRPES(1)PVPAGR;RDAGGPRPES(1)PVPAGR 130.89 1.4438e-10 241651000.0 6930.200000000001 7290.9 7412.099999999999 7246.200000000001 7925.2 7199.9 6990.2 7894.2 7321.95 8215.9 8291.8 True False 7633.748802256403 7905.329730415771 7915.129678578142 7693.781316685771 7368.5612924557445 7141.26640151924 7256.215886184215 7736.743988119903 7014.233904266998 7697.146671865732 7271.961166050919 1.0497510407363677 1.0870973524063532 1.088444987238085 1.0580063810852176 1.0132839167040388 0.9820275766677873 0.9978347959364511 1.063914370753081 0.9645587681371129 1.0584691661720895 1.0 12.828128779890566 -6.787982969684917 2.472973344502416 0.9907814292477256 1.0762597987083786 0.35913120795608866 0.03283703379283044 0.13269627768338504 1.6565850119676135 0.00413124602799468 0.008978477596792081 1.6293599246991505e-07 6.787982969684917 0.08547836946065301 RDAS(ph)EETSTSVMQK ddPTM_A549_MK2206_60min_R1 2 RDASEETSTSVMQK 14 1 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 RDAS(0.933)EET(0.064)S(0.002)T(0.001)SVMQK;RDAS(0.989)EET(0.011)STSVMQK 90.654 1.8019e-05 9873000.0 2932.3 2836.0 2575.6000000000004 2178.17 2558.8 2280.5 1837.9 2138.02 3068.3 3700.5 4001.3 True False 3427.2005521480355 2980.340286464605 2940.8588090069447 2711.821747781767 2182.403909621865 2521.8209963266168 2171.822639837062 2441.0908824116427 2373.334949068267 2864.554479891132 3007.6667797379678 1.139488115916424 0.9909143880374462 0.9777874426844441 0.9016363667846292 0.7256135966671144 0.8384642252644495 0.7220954975691404 0.8116227831010967 0.7890950437252345 0.9524175015626885 1.0 11.554429023935294 -5.599779207639099 1.2690994656635173 0.8632040202721958 1.1615533688632957 0.5295609913585424 0.08530278415196091 0.6734369674968396 1.3694614129060538 0.015736623824595623 0.22166005123698948 2.513163782158343e-06 5.599779207639099 0.29834934859109996 RDASEET(ph)STSVMQK ddPTM_A549_MK2206_60min_R1 1 RDASEETSTSVMQK 14 1 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 RDAS(0.413)EET(0.538)S(0.045)T(0.004)SVMQK 60.448 0.004326 2214600.0 801.5 1298.7 1151.0 1176.9 1642.1 1257.3 1200.3 1155.6 1602.5 1889.9 1708.7 True False 936.7736052063731 1364.798282803802 1314.229107457289 1465.240552833048 1400.5492652767164 1390.3466514718052 1418.3789730651424 1319.409838876575 1239.5363086666546 1462.9702774074449 1284.3826322790756 0.7293571103060722 1.062610353413167 1.0232379934359999 1.140813115973897 1.0904455028261388 1.0825019091115406 1.1043274312642306 1.0272716289656962 0.9650833618539023 1.1390455154407328 1.0 10.32685934651214 -5.256583165597103 24.69657442926766 1.0224019058976586 0.7293569667980089 0.6379750998853766 0.06606407297466044 226.52044679338687 1151936.649171755 0.00952968187011474 0.10749201809934164 5.538814677720427e-06 5.256583165597103 -0.2930449390996497 RDDGTGQLLLPLSDAR ddPTM_A549_PD325901_60min_R1 2 RDDGTGQLLLPLSDAR 16 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 81.692 0.00023587 4981300.0 775.86 668.81 830.8 797.96 775.79 897.74 686.98 930.2 672.3299999999999 1091.77 1037.56 False True 854.6247360420558 725.172965888899 887.1830840062489 847.248176901352 721.3011867302077 890.4291030847481 713.1233998298807 911.6464312722167 644.0743081905553 1022.8354558773658 909.9466976347464 0.939203074491626 0.796940049097232 0.9749835746558917 0.9310964907105344 0.7926850974953906 0.9785508375372635 0.7836979920730798 1.0018679485753268 0.7078154246448921 1.1240608472299034 1.0 9.829638228151717 RDDIEDGDS(ph)MISSATSDTGSAK ddPTM_A549_MK2206_60min_R1 2 RDDIEDGDSMISSATSDTGSAK 22 1 Q86U86-8;Q86U86;E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;H0Y5B5;Q86U86-6 Q86U86-8 PBRM1 Protein polybromo-1 1 RDDIEDGDS(0.982)MIS(0.015)S(0.003)ATSDTGSAK;RDDIEDGDS(0.442)MIS(0.236)S(0.278)AT(0.039)S(0.005)DTGSAK 85.48899999999999 6.258300000000001e-06 9579800.0 2998.8 3676.3 3454.1000000000004 3156.4 3933.9 3384.3 3431.6000000000004 2869.3999999999996 4318.9 4854.0 4730.5 True False 3504.9241263791287 3863.4079672531134 3943.943318912442 3929.7181416961816 3355.228521205819 3742.4243796834753 4055.0773006501195 3276.1462371689536 3340.676045866092 3757.4780287505896 3555.786294841792 0.9856959433876984 1.0865129810690741 1.1091620789004477 1.1051615074271575 0.9435967864753536 1.052488555094672 1.140416482996356 0.921356337393364 0.9395041683782431 1.0567221191558622 1.0 11.79595290448876 -8.274996585025383 24.982438786320596 0.9668786014269642 1.0602317299576343 0.27347793746662863 0.06233555917203931 627.7183035969476 1156720.703554336 0.009531709711121519 0.011553021442314423 5.308886187349373e-09 8.274996585025383 0.09335312853067002 RDDQDDVS(ph)SVR ddPTM_A549_MK2206_60min_R1 2 RDDQDDVSSVR 11 1 A0A3B3ISF0;Q659C4-9;Q659C4;G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;A0A3B3ISF8;Q659C4-3;Q659C4-2;D6RJB0 A0A3B3ISF0 LARP1B La-related protein 1B 1 RDDQDDVS(0.5)S(0.5)VR;RDDQDDVS(0.5)S(0.5)VR 70.622 0.0012307 3687000.0 277.47 330.11 93.664 421.01 376.22 198.17000000000002 142.41 295.935 350.938 463.96000000000004 268.2 True False 324.3001525098098 346.9111889861887 106.94696361501263 524.1574688998573 320.87853637562046 219.14021786540033 168.28405361510198 337.8846925129277 271.45110333282895 359.15111376578596 201.59853805656226 1.6086433742829092 1.7208021066544452 0.5304947379380631 2.600006299414707 1.5916709489509886 1.0870129316310637 0.8347483827878094 1.676027493900416 1.346493411855339 1.7815164595341428 1.0 7.655341366577856 -7.250377031730711 20.4915593895817 1.1779380140920095 1.6114534997472825 0.06684319461044663 0.5184403487426558 93.66044503771849 173489.81079078186 0.06884784777769622 0.1181616138791487 5.618533417459679e-08 7.250377031730711 0.433515485655273 RDDQDDVS(ph)SVR ddPTM_A549_PD325901_60min_R1 2 RDDQDDVSSVR 11 1 A0A3B3ISF0;Q659C4-9;Q659C4;G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;A0A3B3ISF8;Q659C4-3;Q659C4-2;D6RJB0 A0A3B3ISF0 LARP1B La-related protein 1B 1 RDDQDDVS(0.5)S(0.5)VR;RDDQDDVS(0.5)S(0.5)VR 66.533 0.0021331999999999996 4675400.0 373.02 149.3 299.841 296.82 462.65 246.06 367.98 234.46 344.067 382.26 405.69 True False 410.8887157971899 161.88203496839554 320.19001335040633 315.1538972728701 430.1550600558535 244.05616894093302 381.9836802663824 229.78351136968814 329.60706051522266 358.12403836310006 355.79270188079767 1.1548542553715764 0.4549897569923494 0.899934179812605 0.885779544119084 1.209004731637159 0.6859504639943399 1.0736130287303072 0.6458353703013089 0.9264019716336169 1.006552513500076 1.0 8.47489310771997 -14.999999999842384 0.14031404145250406 1.4689967079634976 0.8317019620067861 0.03357562177883788 0.21397019784732244 161.8988468323963 1.524636818576581 20.677155863979273 0.46743208677139947 1.0000000003629246e-15 14.999999999842384 -0.6372947459567114 RDDRDRDDR ddPTM_A549_MK2206_60min_R1 4 RDDRDRDDR 9 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;; 98.04799999999999 0.00045789999999999996 77458000.0 4271.6 4692.5 3321.91 1581.38 374.44 355.37 245.73999999999998 512.25 660.87 5284.96 5316.75 False True 4992.541649406795 4931.328206711976 3793.0067891863096 1968.8181709908467 319.36037201766845 392.9750175244858 290.3877770899175 584.8630061998315 511.1840001925315 4091.08386543587 3996.4542401649087 1.2492427910799209 1.233925852860132 0.9490930112663559 0.4926412396278572 0.07991092924524276 0.0983309188367612 0.07266135420030106 0.1463454780294689 0.12790938403724553 1.0236783957939317 1.0 11.964504854976905 -6.107874255584634 2.6523176122357626 0.4337978728444355 1.234868064923679 0.5180549421600993 0.332525766978438 0.22535125045788898 3.0497045397180815 0.058559817764694405 0.19197296986334494 7.800559330531203e-07 6.107874255584634 0.8010701920792435 RDDRDRDDR ddPTM_A549_PD325901_60min_R1 4 RDDRDRDDR 9 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;; 74.16199999999999 0.0011777 57201000.0 653.56 933.81 904.85 946.7 826.9399999999999 875.4900000000001 726.2399999999999 797.83 1057.18 1108.09 918.16 False True 719.9089300745575 1012.5054459064804 966.258562305073 1005.1755088883036 768.858587188128 868.3602997077847 753.8774606137766 781.9166547644729 1012.7504010424811 1038.1250082921772 805.2321406957855 0.894038990361833 1.2574081370269126 1.1999751543326969 1.2483052502347347 0.954828487749846 1.0783974655525441 0.9362237577381918 0.9710450132912404 1.2577123413968339 1.2892245053645692 1.0 9.653260948095824 -5.228624255564122 22.524446004833667 1.1088460401974305 0.8940374736056343 0.1917828091090682 0.13135836573308018 4987.49306652427 3423215.328031447 0.01850343878726278 3.1378977342309966 5.907119333888577e-06 5.228624255564122 -0.21480856659179615 RDEDMLY(ph)SPELAQR ddPTM_A549_MK2206_60min_R1 1 RDEDMLYSPELAQR 14 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RDEDMLY(0.642)S(0.358)PELAQR 50.088 0.0045161 7755100.0 124.52 177.12 228.97 239.14 276.6 207.72 151.92 130.55 170.99 171.54 200.07 True False 145.5359317782877 186.1346514593127 261.44138899608663 297.7293107354025 235.91250640980428 229.7007925266233 179.52189751566803 149.05586229260723 132.2610380149213 132.78899486029593 150.38709734890546 0.9677421424035946 1.2377035978523554 1.738456247942134 1.9797530239223642 1.5687017740789004 1.5273969414657043 1.1937320467005783 0.9911479436749172 0.8794706483899293 0.8829813009304843 1.0 7.232536984255323 -7.976053667628583 2.360693662868647 0.9442182801307155 1.5293746665327073 0.5361486487074809 0.2455491277364445 0.17949949496422624 2.020400142278084 0.04275375255567437 0.05983952242411968 1.0566869218180144e-08 7.976053667628583 0.5851563864019917 RDEDMLYS(ph)PELAQR ddPTM_A549_MK2206_60min_R1 5 RDEDMLYSPELAQR 14 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RDEDMLY(0.02)S(0.98)PELAQR;RDEDMLY(0.062)S(0.938)PELAQR;RDEDMLY(0.014)S(0.986)PELAQR;RDEDMLYS(1)PELAQR;RDEDMLY(0.006)S(0.994)PELAQR 138.66 7.609199999999999e-10 26105000.0 2630.29 2787.7599999999998 2882.6 2422.22 3448.35 3377.5099999999998 2714.61 3408.33 4442.9400000000005 4304.77 4030.6 True False 3074.218647583622 2929.6450765143045 3291.396025331349 3015.6640087375895 2941.1022830016245 3734.9158663903127 3207.819498519006 3891.471215072861 3436.6211839172706 3332.3194672073923 3029.690781099105 1.0146971653880674 0.9669782456978971 1.0863801830420803 0.9953702297115525 0.970759887890162 1.232771307781901 1.0587943556917316 1.2844450131181773 1.1343141700654151 1.0998876479396027 1.0 11.564954840294421 RDEDMLYS(ph)PELAQR ddPTM_A549_PD325901_60min_R1 5 RDEDMLYSPELAQR 14 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RDEDMLYS(1)PELAQR;RDEDMLY(0.482)S(0.518)PELAQR;RDEDMLY(0.017)S(0.983)PELAQR;RDEDMLY(0.002)S(0.998)PELAQR;RDEDMLYS(1)PELAQR 126.84 4.443399999999999e-08 42657300.0 5411.34 5231.24 5177.719999999999 5175.49 6236.349999999999 5306.2300000000005 5495.38 5948.07 5607.48 6241.82 6247.04 True False 5960.6952531820425 5672.094953838374 5529.111215359695 5495.168262909396 5798.330290239537 5263.0178221549495 5704.509693087324 5829.43107767935 5371.817116136976 5847.710419964335 5478.693683249326 1.0879774628405305 1.035300617587064 1.0092024732582727 1.003007026968936 1.0583417554384316 0.9606337069448164 1.0412171263614196 1.0640184348145574 0.9804923265852377 1.0673548765544694 1.0 12.419616228694563 -2.0000000000000004 0.3832433652985967 0.9973608124879554 2.1297128983117397 0.010057392734488246 0.03812276579050801 49.810388844793856 0.5923560524320223 0.007517345377707922 42.57504539956626 0.00999999999999999 2.0000000000000004 1.1323520858237843 RDEERPR ddPTM_A549_PD325901_60min_R1 1 RDEERPR 7 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 56.547 0.018368000000000002 4033800.0 496.35 652.7 600.29 582.38 494.3 740.37 542.37 369.69 548.0 485.09 684.81 False True 546.7390866064424 707.7053196508494 641.0292892370143 618.3522899190554 459.58207324242636 734.3406721888914 563.0101871462521 362.31624293380526 524.9694657213337 454.4613346140228 600.5827113682592 0.910347694426386 1.1783644554778165 1.067345558077436 1.0295872295596273 0.7652269446707808 1.2227136384194315 0.9374398837815217 0.6032745133611478 0.8741001960002113 0.7567006608942508 1.0 9.230219135228776 -7.980799108485643 24.9975905935715 0.9067700135050931 1.0300597629382207 0.22451882702442538 0.15648326338395854 397.20629124228344 517120.5121381685 0.02403877284553527 0.03321191197089768 1.0452035870372686e-08 7.980799108485643 0.12328974943312754 RDELTLEGIK ddPTM_A549_PD325901_60min_R1 1 RDELTLEGIK 10 1 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 91.54899999999999 0.00064519 1947300.0 553.6 513.04 571.69 593.04 633.48 655.87 392.82 480.97 702.06 758.39 703.73 False True 609.8010644612198 556.2756813140362 610.4883212512427 629.6707339084388 588.9865501873602 650.5288121730051 407.768980059352 471.37667603633435 672.5548596794146 710.5051259723529 617.175671312021 0.9880510409052192 0.9013247073260021 0.9891645922358507 1.020245552728699 0.954325611920614 1.0540415677599224 0.6607016430062733 0.7637641889451988 1.0897300249208883 1.151220242466667 1.0 9.269537382646954 -8.808713579251965 24.99999787938782 1.042372535043509 0.9191545655970536 0.27015234491144846 0.1153836250844748 146.54719050733192 77497.82026874776 0.020410070733661606 0.021728202933508585 1.5534111595153203e-09 8.808713579251965 -0.12321796944645536 RDEQLS(ph)PEEEEK ddPTM_A549_MK2206_60min_R1 2 RDEQLSPEEEEK 12 1 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RDEQLS(1)PEEEEK;RDEQLS(1)PEEEEK 109.07 4.3581e-05 18107200.0 1342.1100000000001 1543.07 1247.62 1248.92 2043.0 1691.19 1157.96 1594.22 1859.7 1765.92 1963.53 True False 1568.625356560856 1621.6056720151394 1424.5512763213403 1554.9054560661484 1742.477406345736 1870.1506032789339 1368.3463431229786 1820.2055670939878 1438.4809193306578 1366.9974455152949 1475.9313103288662 1.062803767074591 1.0986999602669951 0.9651880587884016 1.0535080089328042 1.1805951904072542 1.2670986719986501 0.9271070635516802 1.2332589967810972 0.9746259255182657 0.9261931337513948 1.0 10.52740986476373 RDEQLS(ph)PEEEEK ddPTM_A549_PD325901_60min_R1 2 RDEQLSPEEEEK 12 1 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RDEQLS(1)PEEEEK;RDEQLS(1)PEEEEK 109.07 4.3581e-05 20657100.0 1156.32 1241.3000000000002 1231.92 1478.8600000000001 1798.21 1101.88 929.9300000000001 1039.6100000000001 1173.4 1382.46 1684.19 True False 1273.7087551622074 1345.9087073427288 1315.525499336757 1570.2058234652545 1671.9099330877266 1092.9066546071497 965.318995027222 1018.8741629917328 1124.0860786084174 1295.1712396679006 1477.0453069600455 0.8623356028148306 0.9112169416879884 0.8906466803271474 1.063072213199029 1.131928672200813 0.7399276443702977 0.6535473153589147 0.6898056262666109 0.7610369656987267 0.8768662908069721 1.0 10.52849836474182 -7.280044710710521 24.978400813394536 0.8394137555638717 0.9690298080427691 0.3290533850933264 0.11924379296484401 1230.8647491812296 1652482.0779286935 0.02277385122932069 0.03644397174075204 5.247534339896769e-08 7.280044710710521 0.1296160524788974 RDEQLS(ph)PEEEEKR ddPTM_A549_MK2206_60min_R1 1 RDEQLSPEEEEKR 13 2 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RDEQLS(1)PEEEEKR 43.45399999999999 0.014750999999999998 3805200.0 139.51 318.76 346.42 396.93 396.21 355.12 328.53 409.44 710.05 347.88 398.57 True False 163.05587730797404 334.9835224659581 395.5475650785005 494.1778678188648 337.9280338562133 392.6985626904221 388.2196484387993 467.4793738574116 549.2248087168538 269.29366638684695 299.5940690276064 0.5442560256189487 1.1181246796814617 1.3202783565186411 1.6494914916801249 1.1279530164032538 1.3107688144995837 1.2958188715111927 1.5603759292522417 1.833229911725138 0.8988618074479726 1.0 8.226865253260456 -5.284181518574411 1.863528524348787 1.3968729593901006 0.29866856747135034 0.4103015742665804 0.2662386877202092 0.6173581832077658 2.2493326207611704 0.04351943287737201 1.1564270688374043 5.197787033990674e-06 5.284181518574411 -1.0982043919187503 RDEQLS(ph)PEEEEKR ddPTM_A549_PD325901_60min_R1 2 RDEQLSPEEEEKR 13 2 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RDEQLS(1)PEEEEKR;RDEQLS(1)PEEEEKR 98.507 3.288e-05 9515100.0 1000.0799999999999 1252.37 1175.9 1132.12 1256.51 1341.27 1647.25 1113.36 1552.08 1449.88 1519.3000000000002 True False 1101.607385380016 1357.9116150928978 1255.7036452611324 1202.0484811689303 1168.257072324177 1330.3471418166507 1709.9370001597858 1091.153161385976 1486.8514751035898 1358.334329361931 1332.435731636215 0.8267621163440697 1.0191197840554747 0.9424121670162233 0.9021436851538267 0.8767830557122417 0.9984325023939432 1.283316680542636 0.8189161664450811 1.1158898247780809 1.0194370333298648 1.0 10.37985023274163 -7.517402049246735 24.96162353749237 1.0542039220818098 0.9220276680450686 0.24552153961213363 0.11166724766323895 255.09600022227022 1162674.2148644237 0.01613934660387477 0.024352879091176963 3.038071221095236e-08 7.517402049246735 -0.13217625403674116 RDEQLS(ph)PEEEEKRR ddPTM_A549_MK2206_60min_R1 1 RDEQLSPEEEEKRR 14 3 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RDEQLS(1)PEEEEKRR 40.52 0.030869999999999998 7310700.0 317.11 457.01 367.02 356.62 634.18 238.91 213.79 371.99 681.43 597.42 565.39 True False 370.6304154048575 480.2698569524644 419.0689548383793 443.99191600928 540.8929620931658 264.19129762437694 252.63287565741615 424.7207216715965 527.0871930201054 462.4624070737902 424.98805902982787 0.8720960684188181 1.1300784733783698 0.9860723047020171 1.044716213963363 1.2727250815656521 0.6216440486056918 0.5944469974853696 0.9993709532478591 1.2402400063271228 1.0881774140419607 1.0 8.731278495918085 -8.533589143085921 24.098945824028743 1.1137813719238234 0.936228278847046 0.13800059176042845 0.19412887641516016 219.55120692309953 493998.75166407425 0.035806670247904314 0.04062373475831861 2.9269200314459187e-09 8.533589143085921 -0.17755309307677747 RDEQLS(ph)PEEEEKRR ddPTM_A549_PD325901_60min_R1 1 RDEQLSPEEEEKRR 14 3 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RDEQLS(1)PEEEEKRR 48.547 0.008683100000000001 7939800.0 471.19 608.26 568.09 693.88 572.79 620.95 618.94 896.2 661.45 592.25 960.29 True False 519.0248619282556 659.520204888656 606.6440036026845 736.7393916841831 532.559206418226 615.8931890753164 642.494100396964 878.3245879447007 633.651556754336 554.8552339259825 842.1804177798599 0.6162870223182096 0.7831103537496998 0.7203254680296509 0.8747999551288091 0.6323576221614705 0.7313078956394193 0.7628936589272578 1.0429173718621045 0.7523940753986612 0.658831792110153 1.0 9.71798552039889 -14.999999999988491 0.15056845399716112 1.8428738989470879 0.6873217174946471 0.0 0.14177875109449217 42.9690173890651 0.42550321494226956 10.837767214800776 0.19293518930369502 1.0000000000265005e-15 14.999999999988491 -1.1555521814524408 RDGPGLERS(ph)PGEPGGAAPER ddPTM_A549_MK2206_60min_R1 4 RDGPGLERSPGEPGGAAPER 20 2 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 RDGPGLERS(1)PGEPGGAAPER;RDGPGLERS(1)PGEPGGAAPER;RDGPGLERS(1)PGEPGGAAPER;RDGPGLERS(1)PGEPGGAAPER 160.67 1.2766e-27 344516000.0 2334.66 2840.67 2511.44 2245.17 2164.98 1617.6299999999999 2155.0099999999998 1622.6799999999998 2661.46 3944.8400000000006 4155.99 True False 2728.693531043185 2985.247969517422 2867.5999562402562 2795.236750789512 1846.5143099316635 1788.8065329041106 2546.5474220987358 1852.6998592490827 2058.643559478288 3053.697904189634 3123.942983511159 0.8734773795315134 0.9556025783038298 0.9179424757033222 0.894778414824909 0.5910845107218544 0.5726117737570163 0.8151709027789429 0.5930645562444736 0.6589888388950279 0.9775139688232808 1.0 11.609152407106015 -3.893435485746945 19.22173455172924 0.8065184130565425 0.9170733990755876 0.0 0.16014647208899066 0.0 0.0 0.023728279169807635 0.0 0.00012780990565142185 3.893435485746945 0.11055498601904512 RDGPGLERS(ph)PGEPGGAAPER ddPTM_A549_PD325901_60min_R1 4 RDGPGLERSPGEPGGAAPER 20 2 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 RDGPGLERS(1)PGEPGGAAPER;RDGPGLERS(1)PGEPGGAAPER;RDGPGLERS(1)PGEPGGAAPER;RDGPGLERS(1)PGEPGGAAPER 167.72 6.379699999999999e-35 545736000.0 2765.82 2868.83 2977.36 3418.89 3383.31 3418.3799999999997 3279.09 3577.13 3624.4999999999995 3407.83 3648.8100000000004 True False 3046.6040103109294 3110.5963722597608 3179.4215539201327 3630.067070437446 3145.6779773858657 3390.5418466402784 3403.8775643368967 3505.7813359458 3472.1748695382735 3192.6590322160955 3200.029501712324 0.95205497595591 0.972052404702923 0.9935600756864386 1.1343855012883508 0.9830153052347251 1.0595345589239136 1.0637019322839039 1.0955465673269167 1.0850446433947953 0.9976967495167515 1.0 11.64386949033031 -6.014281903266467 22.908702850073375 1.0494672288008173 0.9672417472082413 0.4108837872999199 0.04338095165744808 168.7651678773286 270710.429400274 0.00625689700201231 0.017342646084946657 9.676495449867174e-07 6.014281903266467 -0.08222548159257603 RDGS(ph)YGSGR ddPTM_A549_MK2206_60min_R1 2 RDGSYGSGR 9 1 Q08170;A0A0D9SEM4;A0A0D9SGD2 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 RDGS(1)YGSGR;RDGS(1)YGSGR 104.24 0.00025833 28077000.0 1601.3600000000001 1627.6399999999999 1279.1 1270.32 1890.12 1319.9099999999999 1362.29 1500.37 2008.7199999999998 2013.1 2403.6 True False 1871.6304185068968 1710.4799237874633 1460.4956136825533 1581.5484570268318 1612.0858518268226 1459.5820001146517 1609.8004592326186 1713.0520421904173 1553.7481272666967 1558.3393118413296 1806.7197840147405 1.0359273391847834 0.9467322707822344 0.8083686394561768 0.8753700883888302 0.8922722085018525 0.8078629641566727 0.8910072682413737 0.9481559106990113 0.8599829043849226 0.8625240757471085 1.0 10.819157051207247 -10.882024936403985 0.9890423209254572 1.0037993762131892 0.8906381971300511 0.0 0.07393294556560316 0.6172051858991527 1.0103755192660513 0.05181046661831548 0.010862006314263902 1.3121245570363636e-11 10.882024936403985 -0.11316117908313805 RDGS(ph)YGSGR ddPTM_A549_PD325901_60min_R1 3 RDGSYGSGR 9 1 Q08170;A0A0D9SEM4;A0A0D9SGD2 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 RDGS(1)YGSGR;RDGS(0.985)YGS(0.015)GR;RDGS(1)YGSGR 118.87 6.6948e-05 44422000.0 2716.46 2671.77 2905.3999999999996 2480.73 2965.6000000000004 2838.88 2811.84 2911.95 2625.42 3169.76 3408.85 True False 2992.233019447842 2896.929434477631 3102.5779155894993 2633.9590579533947 2757.306486764594 2815.761102507665 2918.846109897889 2853.868872869416 2515.0827275439847 2969.620812645373 2989.5830604805574 1.0008863975054965 0.969007843525835 1.0377961919180725 0.8810456189599902 0.9223046929899896 0.9418574582286563 0.9763388575759131 0.9546043094085079 0.8412821041137758 0.9933227318220168 1.0 11.54572857894497 -6.257348444199877 24.97802236593058 0.9279756430105569 0.9992079127173841 0.24072749977133445 0.0475325898890083 415.2714794804399 2535510.808174281 0.00838244372389366 0.021336105312586427 5.52906322070789e-07 6.257348444199877 0.07123226970682717 RDHALLEEQSK ddPTM_A549_PD325901_60min_R1 2 RDHALLEEQSK 11 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 109.72 3.0406e-05 35092000.0 3672.3 4421.6 4350.299999999999 4057.0 4983.5 4165.7 4560.200000000001 4162.7 4761.299999999999 5310.6 5188.6 False True 4045.1091925956243 4794.223749606552 4645.5375184790355 4307.591675884491 4633.476152141673 4131.775920333433 4733.74090643719 4079.671682925022 4561.199118866758 4975.287809687334 4550.43509324535 0.8889499816402546 1.0535748013905486 1.020899633394366 0.9466329235810144 1.0182490371128663 0.9079957928565175 1.0402831398395151 0.8965454070492891 1.0023654937167188 1.0933652953478303 1.0 12.151788780931026 RDHRPPCAQEAPR ddPTM_A549_MK2206_60min_R1 4 RDHRPPCAQEAPR 13 2 E7EMC7;Q13501-2;Q13501;C9JRJ8;E9PFW8;E3W990 E7EMC7 SQSTM1 Sequestosome-1 0 ;;; 160.27 4.8867e-19 107879000.0 1458.08 922.2800000000001 1117.19 1495.83 1339.21 976.57 1084.022 1241.35 1958.55 2038.39 2369.5199999999995 False True 1704.1682573665744 969.2201126236158 1275.6243410601296 1862.3084171503613 1142.213983040759 1079.9099892052982 1280.9747655919525 1417.3151639749358 1514.941552161671 1577.916283276661 1781.1027885748902 0.9568051143921495 0.5441685448143707 0.7161991712341275 1.045592892839411 0.6412959377570097 0.6063153660375571 0.7192031666049414 0.7957514709799366 0.8505637978220325 0.8859209549265799 1.0 10.798555062352682 -9.445647266507011 0.7731972635225599 0.9771854647425556 0.7420462316297248 0.20337588660568895 0.1414889629017514 0.4811640815575033 0.6210309386571912 0.04631412093124686 0.03110746345735019 3.583874007729586e-10 9.445647266507011 -0.2351392331128308 RDHRPPCAQEAPR ddPTM_A549_PD325901_60min_R1 4 RDHRPPCAQEAPR 13 2 E7EMC7;Q13501-2;Q13501;C9JRJ8;E9PFW8;E3W990 E7EMC7 SQSTM1 Sequestosome-1 0 ;;; 60.157 0.0024446999999999997 105833100.0 2274.3199999999997 2263.4 1770.92 1763.25 1527.277 1111.0 1285.6299999999999 1363.3100000000002 1524.69 2357.2100000000005 2564.09 False True 2505.2072921341073 2454.1446614029915 1891.1052806070613 1872.1619478687032 1420.0063323396175 1101.952384350876 1334.5553531737298 1336.1177125539946 1460.612581552299 2208.3753583160255 2248.723185105707 1.1140576611328634 1.0913502727493904 0.8409684629627567 0.8325444235506013 0.631472269128077 0.4900346968669137 0.593472492307227 0.5941672685209526 0.6495297381316585 0.9820574506204574 1.0 11.134890362827818 -2.313119231908512 9.525411225073224 0.7989668124780326 1.0628551806848483 0.0 0.21140098299856683 0.0 0.0 0.030763097646698257 0.0 0.004862736850009227 2.313119231908512 0.2638883682068157 RDKKS(ph)PLIESTANMDNNQSQK ddPTM_A549_MK2206_60min_R1 2 RDKKSPLIESTANMDNNQSQK 21 3 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RDKKS(0.795)PLIES(0.103)T(0.103)ANMDNNQSQK;RDKKS(0.992)PLIES(0.004)T(0.004)ANMDNNQSQK 64.488 0.00056083 6329200.0 722.58 1055.69 1010.27 762.3199999999999 1489.73 1222.71 930.1999999999999 939.52 1470.44 1743.49 1210.72 True False 844.5338386151235 1109.4201117834336 1153.5414773161392 949.0884342218446 1270.5926904333983 1352.096360630789 1099.2052992961717 1072.6998371593281 1137.3876878101694 1349.6343980936063 910.0648098278945 0.9279930720261959 1.2190561593006106 1.2675377235323377 1.0428800498300006 1.3961562700943073 1.4857143645478266 1.2078318900211582 1.1787070828089596 1.2497875706514405 1.483009103877822 1.0 9.829825479578275 -10.690613707880273 0.813289382654933 0.9906396994969884 1.2287510768732022 0.0 0.20197643587070602 0.79214093965188 0.8726246292899571 0.11975113483460346 0.02693675570215631 2.0388547725428335e-11 10.690613707880273 0.2381113773762138 RDKKS(ph)PLIESTANMDNNQSQK ddPTM_A549_PD325901_60min_R1 3 RDKKSPLIESTANMDNNQSQK 21 3 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RDKKS(0.675)PLIES(0.163)T(0.163)ANMDNNQSQK;RDKKS(0.683)PLIES(0.158)T(0.158)ANMDNNQSQK;RDKKS(0.604)PLIES(0.198)T(0.198)ANMDNNQSQK 57.147 0.0018977 10132000.0 1578.51 1947.67 1595.73 2124.59 1898.9099999999999 2176.9300000000003 1735.7600000000002 1541.9 1949.04 1690.31 2372.96 True False 1738.7591731623565 2111.80698624846 1704.0258337040102 2255.8210990060206 1765.5371124838668 2159.201803838842 1801.8152966443172 1511.1455949028505 1867.1286267691737 1583.5835381298898 2081.1009634328125 0.8354996723917916 1.0147547011678844 0.8188097856113572 1.0839556266818522 0.8483668709525666 1.0375286167169904 0.8657990786147114 0.7261279589290994 0.8971831062387825 0.7609354692324687 1.0 11.023131242964782 -10.589625377459454 1.1218968748335452 0.9949577670825785 0.9064505134983869 0.0 0.12236801231290274 0.8073012841693482 1.9437700321419211 0.048409743415055946 0.016663408566890366 2.5726139634481013e-11 10.589625377459454 -0.08850725358419165 RDKS(ph)PGRPLER ddPTM_A549_MK2206_60min_R1 1 RDKSPGRPLER 11 3 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 RDKS(1)PGRPLER 42.083 0.014325 15188000.0 598.22 686.49 475.81 477.35 675.06 386.13 575.94 619.54 828.6 960.61 603.92 True False 699.184910925211 721.4294087641347 543.2870127013489 594.3007714290561 575.7595682465744 426.9900203076501 680.5808429118867 707.3616922616766 640.9234230023026 743.6075338273804 453.949996655925 1.5402245094742533 1.5892265978161197 1.1967992437570993 1.3091767282895501 1.2683325751469845 0.9406102510257106 1.499241872288719 1.5582370249422581 1.41188110524009 1.6380824745131646 1.0 8.826389580794162 -10.697527819318804 0.9626708273881577 1.000347345176324 1.3620720180885073 0.0 0.26019648526053 0.522086743883365 0.8622550418657405 0.12849208190590786 0.03386450828295941 2.0066525470658116e-11 10.697527819318804 0.36172467291218324 RDKS(ph)PGRPLER ddPTM_A549_PD325901_60min_R1 4 RDKSPGRPLER 11 3 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 RDKS(1)PGRPLER;RDKS(1)PGRPLER;RDKS(1)PGRPLER;RDKS(1)PGRPLER 52.5 0.003947699999999999 127491300.0 12514.87 12665.78 12425.15 12274.43 14558.529999999999 13135.61 12930.16 12117.57 11622.55 13855.52 13551.769999999999 True False 13785.370389439637 13733.169731158778 13268.395397496677 13032.593663846901 13535.98907700193 13028.637947257619 13422.224314455041 11875.875560300232 11134.094642006361 12980.680102602171 11884.988201747972 1.1598976924026032 1.1555055417841296 1.1163995430424778 1.0965592428547928 1.138914809777526 1.0962264098286143 1.129342670485864 0.9992332645777132 0.9368199995662448 1.0921912485107097 1.0 13.536852850664198 -8.321672950700796 3.8512525968346343 0.9701083575018137 1.1267850302387783 0.6036545900376096 0.04381158392000793 0.05907460766310233 1.7762440552047365 0.004907432897507944 0.00604503857597896 4.767899024975221e-09 8.321672950700796 0.15667667273696462 RDLIDNS(ph)FNR ddPTM_A549_MK2206_60min_R1 2 RDLIDNSFNR 10 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 RDLIDNS(1)FNR;RDLIDNS(1)FNR 94.12200000000001 0.00024461 2962800.0 453.55 516.14 576.9 613.73 794.16 642.55 577.82 693.02 805.25 806.19 862.94 True False 530.0981517671252 542.4093213878143 658.7130947802865 764.0938775513866 677.340116017391 710.5442145098299 682.8024145767728 791.2577072847388 622.8621607200146 624.0711190767285 648.6481820675989 0.8172352384884677 0.8362149719727221 1.0155167515934527 1.1779789085599512 1.0442334299902531 1.0954231186541434 1.0526544796599993 1.219856509521949 0.9602465218273023 0.9621103339678995 1.0 9.341292382005413 -5.760488486089235 5.4434936326322285 1.0285265547087503 0.8231211224409533 0.519279915771319 0.08212744909225285 0.11260071041366852 10.38853326491573 0.012568673643932174 0.04573589930566541 1.735847282626735e-06 5.760488486089235 -0.20540543226779706 RDLIDNS(ph)FNR ddPTM_A549_PD325901_60min_R1 2 RDLIDNSFNR 10 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 RDLIDNS(1)FNR;RDLIDNS(1)FNR 119.25 2.5087e-05 11856700.0 817.8299999999999 1138.26 1203.3400000000001 1209.92 1125.19 994.09 1259.2800000000002 1023.59 1209.87 1339.28 1603.27 True False 900.8554995453742 1234.1851649238179 1285.0058886712561 1284.65401047231 1046.1605360947706 985.9944606294893 1307.2025895044565 1003.1736944591789 1159.0233713362586 1254.717632237045 1406.0779539659015 0.6406867393123359 0.8777501712780199 0.913893774556982 0.9136435194427803 0.7440274083979704 0.701237408529485 0.929680026500264 0.7134552473635517 0.8242952448455542 0.892352823467619 1.0 10.457460865333154 -10.424329799523388 0.7631477533563886 1.0013409525458936 0.8110024553829236 0.20466026595260423 0.09785060961233615 0.5751446187986351 0.6038466808221559 0.06223962819006723 0.01813333996098997 3.764178419240816e-11 10.424329799523388 -0.19033849716297002 RDLNES(ph)PVK ddPTM_A549_MK2206_60min_R1 4 RDLNESPVK 9 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 RDLNES(1)PVK;RDLNES(1)PVK;RDLNES(1)PVK;RDLNES(1)PVK 120.57 5.7613999999999994e-05 56591500.0 7677.5 8180.700000000001 6939.01 6704.9 9759.300000000001 7635.1 8663.3 7415.599999999999 10663.4 10961.4 11347.5 True False 8973.274303146514 8597.062687405149 7923.065959111382 8347.600800994394 8323.719898066542 8443.041214230798 10237.309470428425 8466.784009322539 8248.156925950701 8485.21212697707 8529.602574932294 1.05201552174519 1.007908939705012 0.9288904013413863 0.9786623383283077 0.9758625709630572 0.9898516537035509 1.2002094330297313 0.9926352294778219 0.9670036620687656 0.9947957190777349 1.0 13.058262807386 -5.309134139122648 4.515544211183698 0.9949950538806591 1.0537174957608133 0.03037851057140928 0.06606737786195162 0.4384752123828366 18.512958438738774 0.009016967551334909 0.06972627129165748 4.907562744487631e-06 5.309134139122648 0.058722441880154186 RDLNES(ph)PVK ddPTM_A549_PD325901_60min_R1 2 RDLNESPVK 9 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 RDLNES(1)PVK;RDLNES(1)PVK 117.2 7.6052e-05 82035000.0 8027.3 7844.0 7382.099999999999 6822.2 9101.2 7280.4 7230.6 7828.7 7137.9 8501.7 8352.8 True False 8842.22558661407 8505.0414085204 7883.0936981734885 7243.5917996596445 8461.963109435503 7221.110836208926 7505.764439736144 7672.550437003655 6837.918885715883 7964.901211090806 7325.458552761778 1.2070542100440187 1.1610251218080956 1.0761228995284502 0.9888243510610992 1.1551444934795583 0.9857554696676959 1.0246135973162238 1.047381591437852 0.9334458500400514 1.0872904615763543 1.0 12.838703355608487 -2.34399198561234 0.29681543985960207 0.9689143007986885 2.6827906073539483 0.43474922879428635 0.06145223742738651 16.586319612221445 0.250571023520181 0.01793624448918018 14.747546012693984 0.004529059376664243 2.34399198561234 1.7138763065552598 RDLRDDRDR ddPTM_A549_PD325901_60min_R1 1 RDLRDDRDR 9 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 43.282 0.037545999999999996 5039000.0 246.59 376.51 290.71 212.13 174.67 430.23 175.88 368.19 284.27 431.93 444.04 False True 271.62363527003674 408.23981906195985 310.4393287812431 225.23278831781536 162.40178177878724 426.7263495223021 182.57320964522893 360.84616161053265 272.3231204755538 404.6578660863651 389.42589500147744 0.6974976208734301 1.0483119492102881 0.7971717668648237 0.5783713697748858 0.41702871807785435 1.0957831900744124 0.468826577761441 0.9266105984276255 0.6992938167979832 1.0391139143041064 1.0 8.60520500949832 -10.841890979950897 0.8231160189559104 1.019526144360784 0.746184266936671 0.20283287222426427 0.20649353995515057 1.066406501955386 1.1243105020307935 0.1954300440309052 0.03605121773223448 1.439159802235639e-11 10.841890979950897 -0.273341877424113 RDNTFFRES(ph)PVGR ddPTM_A549_PD325901_60min_R1 1 RDNTFFRESPVGR 13 2 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 RDNT(0.006)FFRES(0.994)PVGR 63.128 0.0021915 8875800.0 1420.6 1363.7 1130.4 1312.8 1466.9 1707.1 1370.2 1545.8 1422.1 1462.0 1896.4 True False 1564.8182662095546 1478.623784905566 1207.1157416474043 1393.888674414877 1363.870004530275 1693.1979435872013 1422.3437108022101 1514.9678063433591 1362.3340824859638 1369.6890704935188 1663.1548222700706 0.9408734804819346 0.8890475890196231 0.7257987804164797 0.838099168971132 0.820049935380462 1.0180639354285275 0.8552082414437082 0.9109000473422864 0.8191264362427119 0.8235487473282884 1.0 10.699706759315308 RDNYVPEVSALDQEIIEVDPDTK ddPTM_A549_PD325901_60min_R1 2 RDNYVPEVSALDQEIIEVDPDTK 23 1 H0YN88;A0A075B716;H3BNC9;P08708 H0YN88 RPS17 40S ribosomal protein S17 0 ; 94.20100000000001 6.2899e-07 1826550.0 1747.4 1637.26 1835.68 1634.83 1798.0 1666.08 1423.95 1841.31 1694.21 1733.1999999999998 1781.88 False True 1924.7947616321094 1775.2376461644697 1960.2602836405774 1735.8097361316823 1671.7146827632657 1652.511996867064 1478.1391964653385 1804.5836275702497 1623.0082454739795 1623.7654562102368 1562.720056267978 1.2316951804079503 1.1359921049480974 1.254389918257009 1.110761795863214 1.069746738104574 1.057458749722278 0.9458758723525749 1.154770888318846 1.0385790077782577 1.0390635544078477 1.0 10.609843643545762 -6.6567414774589775 1.8001255862464063 1.0269820382904762 1.2014783970820355 0.612767087561175 0.05603989715774072 0.15906225202283059 1.0375966309320903 0.00800183775977099 0.02046927304732927 2.2042381897948623e-07 6.6567414774589775 0.17449635879155934 RDPALNS(ph)GVSQKPDPAK ddPTM_A549_PD325901_60min_R1 1 RDPALNSGVSQKPDPAK 17 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 RDPALNS(0.998)GVS(0.002)QKPDPAK 66.87100000000001 0.00043223 13118000.0 2635.8 2571.5 2130.6 2334.6 2608.1 2202.8 2534.8 2596.7 2708.6 2505.6 2492.6 True False 2903.384475626597 2788.209329680036 2275.195328338606 2478.8029397387063 2424.9160534565485 2184.8611271360114 2631.2632010957836 2544.906781428258 2594.766961410227 2347.3959883916273 2186.0260018932604 1.3281564231679088 1.2754694259195636 1.0407906065015322 1.133931132379889 1.1092805169546893 0.9994671267605051 1.2036742467001376 1.1641704074993529 1.1869790016966708 1.0738188778901114 1.0 11.094094846046726 -14.529729222415442 0.29912258758835564 2.3238465299900226e-11 1.1674318137537483 0.18679026303790935 0.09224470512922386 33.84537367038783 0.5806421919566463 20.189991391470834 0.034611922748724794 2.9530498452154523e-15 14.529729222415442 1.1674318137305097 RDPEDS(ph)DVFEEDTHL ddPTM_A549_MK2206_60min_R1 2 RDPEDSDVFEEDTHL 15 1 Q9NZ53-2;Q9NZ53 Q9NZ53-2 PODXL2 Podocalyxin-like protein 2 1 RDPEDS(0.995)DVFEEDT(0.005)HL;RDPEDS(1)DVFEEDTHL 60.768 0.0022892 13400900.0 0.0 315.91999999999996 178.58 170.24 0.0 289.87 185.26 162.02 379.16999999999996 418.65999999999997 284.19 True False 0.0 331.99897859657904 203.9053292873352 211.9488076423641 0.0 320.5438509998667 218.91934395571786 184.9868311654402 293.28860041006897 324.0844152280022 213.61777975501283 0.0 1.5541729671440807 0.9545335108397047 0.9921871104803973 0.0 1.500548556246029 1.0248179913057103 0.8659711348820872 1.372959688778839 1.517122851850992 1.0 7.738887919650745 RDPEDS(ph)DVFEEDTHL ddPTM_A549_PD325901_60min_R1 2 RDPEDSDVFEEDTHL 15 1 Q9NZ53-2;Q9NZ53 Q9NZ53-2 PODXL2 Podocalyxin-like protein 2 1 RDPEDS(0.997)DVFEEDT(0.003)HL;RDPEDS(1)DVFEEDTHL 66.533 0.0016132000000000002 12872300.0 422.23 352.48 742.34 288.34 538.79 271.13 308.32 393.57 453.61 361.56 546.53 True False 465.09447877070255 382.1847266286678 792.7196564530558 306.1501069323473 500.9472491245941 268.92200717286505 320.0532863191777 385.71993760030807 434.5463491712664 338.7310398957844 479.31027473911666 0.9703411407649218 0.7973639347428694 1.65387578408271 0.6387305323237259 1.0451418956066698 0.5610603847773478 0.6677371698184004 0.8047395558341645 0.9066076236479287 0.7067051506044848 1.0 8.904816056408606 RDPRNLQSEVK ddPTM_A549_PD325901_60min_R1 1 RDPRNLQSEVK 11 2 M0R0M5;F5H026;Q6PDB4-2;Q6PDB4 M0R0M5 ZNF880 Zinc finger protein 880 0 44.765 0.025869999999999997 4008500.0 1495.5 1249.5 1693.2 1321.1 1470.5 1558.5 1421.4 1180.9 1632.1 1543.5 1647.0 False True 1647.3220590710878 1354.7997501206319 1808.1107340387357 1402.70134656421 1367.217152949601 1545.808092719028 1475.4921548199247 1157.346023101871 1563.508512780635 1446.0431465846425 1444.429441193211 1.1404655790664802 0.9379480308857884 1.2517819718110257 0.9711110190370184 0.9465447836760883 1.0701859492991714 1.0215051789591423 0.8012478769096628 1.0824402135483029 1.001117192259733 1.0 10.49628401620263 RDPSSNDINGGMEPTPSTVS(ph)TPSPSADLLGLR ddPTM_A549_PD325901_60min_R1 1 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPST(0.002)VS(0.475)T(0.295)PS(0.22)PS(0.008)ADLLGLR 142.04 3.3161999999999996e-40 15038000.0 870.1 904.1 811.71 572.4 954.45 759.57 978.07 847.25 955.95 673.76 1227.5 True False 958.4319114662342 980.2916799392262 866.7975218087538 607.7558479852801 887.4127246737482 753.3843137546313 1015.2909890704402 830.3509340952329 915.7747459056725 631.2186786153986 1076.5252817636108 0.8903013498169677 0.9106072068584117 0.805180831785695 0.5645532513547921 0.8243305937227502 0.6998296524168983 0.9431185744259959 0.7713250660819742 0.8506764879737987 0.5863482161620103 1.0 10.07216648567833 -10.003718876598265 0.5416400902928139 1.0065194356875247 0.7921553085798322 0.0 0.15711528061075794 0.7746433402013219 0.44043580562833234 0.07593814493785547 0.025718806893564285 9.91473528497579e-11 10.003718876598265 -0.21436412710769248 RDPSSNDINGGMEPTPSTVST(ph)PSPSADLLGLR ddPTM_A549_MK2206_60min_R1 1 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPS(0.001)TVS(0.026)T(0.667)PS(0.293)PS(0.013)ADLLGLR 117.88 2.7379e-21 18729000.0 1344.6 1431.5 1228.3 1205.4 1873.1 1190.5 1670.5 1879.0 2363.0 1982.1 2310.9 True False 1571.5356076861997 1504.3572355691401 1402.4914098086788 1500.723054112462 1597.569471280565 1316.4779198100573 1974.008226697758 2145.3540041961605 1827.7842729356048 1534.342233371764 1737.0397524045864 0.9047205773562297 0.86604652166806 0.8074031742032433 0.8639543522449669 0.9197080660180906 0.7578858906295353 1.1364208700262246 1.2350632743012038 1.0522409003049014 0.8833086469367049 1.0 10.762415055371715 -7.763741860784319 24.99979685040202 1.0520420898849545 0.8552849015408381 0.5656315820961726 0.09063434664464308 33.694808655149494 365852.3015125105 0.012935199376578143 0.018344041112730892 1.7228923363860982e-08 7.763741860784319 -0.19675718834411637 RDPSSNDINGGMEPTPSTVST(ph)PSPSADLLGLR ddPTM_A549_PD325901_60min_R1 1 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPS(0.001)T(0.006)VS(0.245)T(0.64)PS(0.106)PS(0.002)ADLLGLR 144.37 1.9761e-40 41207000.0 1219.9 1521.4 1803.1 1443.6 1757.5 1868.5 1722.4 1880.6 1965.8 1985.2 2299.3 True False 1343.743349957084 1649.6137173537643 1925.4692089211205 1532.767893346524 1634.0592630458507 1853.283555499201 1787.9468745334452 1843.0899576978402 1883.1842622536449 1859.8541332036489 2016.5006764636018 0.6663738652017948 0.8180576067282763 0.9548567136103688 0.760112759314609 0.8103440192797504 0.9190592282613861 0.8866582071616369 0.9140041355850783 0.9338872454812374 0.9223176341628266 1.0 10.977638174378363 -2.0000000000234635 0.12770422029576636 1.0433721767482516 0.06380656959587569 0.529924159043736 0.06382113830739986 36.31225320623435 0.30280459106495045 0.17451547744341933 6.431014776758737 0.009999999999459734 2.0000000000234635 -0.9795656071523758 RDPSSNDINGGMEPTPSTVSTPS(ph)PSADLLGLR ddPTM_A549_MK2206_60min_R1 1 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPS(0.001)S(0.001)NDINGGMEPT(0.004)PS(0.106)T(0.106)VS(0.106)T(0.096)PS(0.561)PS(0.018)ADLLGLR 55.31100000000001 0.0019440000000000002 19628000.0 1347.5 1026.8 731.97 587.41 1712.4 1159.0 1092.3 933.04 1733.5 1516.8 1103.5 True False 1574.9250567880076 1079.0597341826008 835.7743525504011 731.3254763698372 1460.5082284025632 1281.6446107180652 1290.756771039785 1065.3012773151602 1340.8650178306682 1174.1538265366491 829.4704949493535 1.8987113663207162 1.3009018895222872 1.0075998575469916 0.8816775048936384 1.7607717661997613 1.5451358650150915 1.556121379722611 1.284314853634675 1.6165313003840358 1.4155462233871763 1.0 9.69604685384036 -10.972437457382773 1.2275854853339683 0.9988871381557911 1.4288611242208253 0.008560231857682843 0.3113702973137058 0.588866681871165 1.5714802594494983 0.2129246321463481 0.04861067313931207 1.0655222981637523e-11 10.972437457382773 0.42997398606503423 RDPSSNDINGGMEPTPSTVSTPS(ph)PSADLLGLR ddPTM_A549_PD325901_60min_R1 2 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPS(0.003)T(0.003)VS(0.013)T(0.013)PS(0.772)PS(0.196)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.026)T(0.084)PS(0.851)PS(0.038)ADLLGLR 163.95 1.3027000000000002e-51 48741000.0 2109.73 2096.85 2536.98 2124.8 2330.03 2109.31 1762.38 2323.2200000000003 2793.05 2763.98 2766.19 True False 2323.908236498861 2273.558908395714 2709.1547189000644 2256.0440702290757 2166.376730967126 2092.132478699501 1829.4483353113403 2276.881554569168 2675.6678215930124 2589.4618310962223 2425.966166323162 0.9579310168290673 0.9371766762277484 1.116732276199098 0.9299569390319968 0.8929954428220761 0.8623914495354957 0.7541112323442191 0.938546293916395 1.1029287459718793 1.0673940416163583 1.0 11.244343714750286 -8.66915616570704 7.040090121715265 1.0484480713430568 0.9212951102364532 0.33116741258924975 0.0841357522113708 0.2157949967769943 14.122931759275385 0.015819514732041372 0.017922629327998433 2.142120188692156e-09 8.66915616570704 -0.12715296110660368 RDQALTEEHAR ddPTM_A549_MK2206_60min_R1 4 RDQALTEEHAR 11 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;H0YJ11 P12814-4 ACTN1 Alpha-actinin-1 0 ;;; 160.22 7.1466e-14 54453900.0 2251.58 1729.48 1836.94 1477.0900000000001 1685.26 1533.6999999999998 1595.8400000000001 1452.02 2380.82 2700.71 2618.0699999999997 False True 2631.59165815417 1817.503144793654 2097.4457138597695 1838.9771163090902 1437.3604864504225 1695.9951160123346 1885.7834711124526 1657.8482816247522 1841.5680713882962 2090.617735275444 1967.9309639438634 1.3372377925698606 0.9235604185785348 1.0658126490658748 0.9344723722541867 0.7303917224666547 0.861816368097308 0.9582569234711457 0.8424321340532774 0.9357889606542256 1.0623430260407651 1.0 10.942463895724003 RDQALTEEHAR ddPTM_A549_PD325901_60min_R1 2 RDQALTEEHAR 11 1 P12814-4;P12814-3;P12814;P12814-2;H9KV75;H0YJ11 P12814-4 ACTN1 Alpha-actinin-1 0 ; 113.42 9.0549e-06 19560000.0 1466.9699999999998 1484.15 1185.23 1357.45 1210.76 1490.3400000000001 1335.1 1054.13 1212.04 1562.0 1762.8899999999999 False True 1615.8957144737633 1609.224529124877 1265.6668351669796 1441.2966035073705 1125.7203944952448 1478.203165160652 1385.907961094752 1033.1045502010131 1161.1021737826366 1463.3750534274125 1546.0657058804488 1.0451662619044693 1.040851318934379 0.8186371577566371 0.932235025992369 0.7281193743665461 0.9561063022990017 0.8964094836483739 0.6682151646411973 0.7510044168022054 0.9465154345390865 1.0 10.59438591798277 -5.752404362294523 24.45092159073771 0.8616388727780007 1.0430089506259053 0.34094155986475994 0.10036450777604698 148.87391886447458 402875.86244186334 0.015980515055962707 0.060056505946737504 1.7684616147838006e-06 5.752404362294523 0.1813700778479046 RDRDGYS(ph)YGSR ddPTM_A549_PD325901_60min_R1 2 RDRDGYSYGSR 11 2 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80;Q13247-2 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 RDRDGYS(0.992)YGS(0.008)R;RDRDGYS(0.924)YGS(0.075)R 54.501000000000005 0.006176300000000001 16764400.0 3339.3 3043.9 3135.3 3529.8 3990.0 3796.8 3386.7 3721.6 3452.1 3680.4 3757.2 True False 3678.303277737268 3300.4201355679807 3348.0803120905066 3747.8277292425596 3709.7561647527423 3765.880119625029 3515.582721773348 3647.3697684612803 3307.020242001124 3448.0189158990074 3295.0882188531446 1.1162988768226367 1.0016181408085918 1.0160821470375703 1.137398297198547 1.1258442622346307 1.1428768729402163 1.0669161152222342 1.1069111132116358 1.003621154383579 1.0464117155258108 1.0 11.686101375448738 -8.77030118465225 24.49923678533867 1.001709977032986 1.0877524438855988 0.3182736380496467 0.045856574662292704 103.77868737849414 286904.3623423082 0.007983046706049194 0.008562848242958668 1.697066323188721e-09 8.77030118465225 0.08604246685261274 RDRS(ph)PIRGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RDRSPIRGSPR 11 3 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 2 RDRS(1)PIRGS(1)PR 52.172 0.008806999999999999 97376000.0 1442.4 1676.1 1724.7 1281.0 2362.8 1623.1 1394.3 1848.8 2532.3 2629.3 2831.7 True False 1685.8418567057677 1761.4063307980684 1969.2883941195357 1594.8450575062752 2015.235249982233 1794.855364673417 1647.6262618884675 2110.8730617125398 1958.73809325215 2035.3393038718423 2128.510739055807 0.7920288236147663 0.8275299243166687 0.925195423253114 0.7492774305727665 0.9467818099316604 0.8432446835901813 0.7740746765596981 0.9917136065984374 0.9202387647435752 0.9562269367617592 1.0 11.055628653683973 -8.963977206808073 0.31272512927138224 1.0146412436520706 0.8167341497706753 0.3940178338035706 0.06670447487612878 0.8943881993224366 0.26253880808106517 0.06341258391828153 0.04829619522132476 1.0864826442761376e-09 8.963977206808073 -0.19790709388139538 RDRS(ph)PIRGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RDRSPIRGSPR 11 3 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 2 RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR 50.534 0.009982600000000001 376580000.0 5338.2 5057.0 4880.3 4616.6 5417.299999999999 4764.9 4326.299999999999 5787.5 4988.299999999999 5575.5 5990.299999999999 True False 5880.130134224863 5483.171137543041 5211.506505627943 4901.756896940681 5036.8075366704325 4726.096234197557 4490.939713942199 5672.063772294081 4778.6590982805255 5223.461978479219 5253.531075640369 1.119271980990065 1.0437115643928463 0.9920007002133696 0.9330404305913792 0.9587470720455348 0.8996037457761643 0.854842133658605 1.0796669307990523 0.9096089905013154 0.9942764025322751 1.0 12.359071717520427 -5.550569096381694 1.5933734598395923 0.9525609331463016 1.1353570525476298 0.449796960305085 0.056523676899665996 0.42775234726557193 1.5051558772031715 0.008144167251868834 0.10176147629933556 2.8146921611444583e-06 5.550569096381694 0.18279611940132812 RDRS(ph)VSVDSGEQR ddPTM_A549_PD325901_60min_R1 2 RDRSVSVDSGEQR 13 2 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 RDRS(0.959)VS(0.04)VDS(0.001)GEQR;RDRS(0.973)VS(0.025)VDS(0.001)GEQR 59.513000000000005 0.0030234000000000003 7045200.0 601.1800000000001 588.37 656.76 602.22 867.29 670.8199999999999 567.19 659.02 607.72 726.4200000000001 1060.18 True False 662.2113510346751 637.9540047846949 701.3316830187101 639.4177616591467 806.374542388071 665.3570643296617 588.7747258282775 645.8753291088112 582.1796418032275 680.553717228387 929.784581034741 0.7122201900764064 0.6861309789357091 0.7542948090601915 0.6877052757183281 0.8672702890928464 0.7156034611686047 0.6332377819957397 0.6946505053783834 0.6261446507914015 0.7319477340342756 1.0 9.860752691078837 -10.844239783925584 1.0497921883023411 1.002808226445764 0.7056402772035418 0.09531433735602257 0.09826305668101466 0.21683729101022167 0.41766156942178834 0.04816180974868833 0.011348089659518477 1.4313973738015523e-11 10.844239783925584 -0.29716794924222223 RDRYS(ph)AGK ddPTM_A549_MK2206_60min_R1 2 RDRYSAGK 8 2 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 RDRY(0.001)S(0.999)AGK;RDRY(0.002)S(0.998)AGK 70.977 0.0020824999999999997 32000000.0 5970.1 6578.200000000001 5769.6 5276.7 7640.9 6412.7 5117.2 5996.0 8771.5 9152.900000000001 7727.5 True False 6977.706925068707 6913.002282236055 6587.816036824999 6569.491736880065 6516.933731839023 7091.287657594248 6046.929001890313 6845.9513619798745 6784.769255207212 7085.253533034872 5808.54848184969 1.2012823766337417 1.1901428220557195 1.134158741621996 1.1310040292179946 1.1219556404156503 1.2208364412818122 1.0410396023697668 1.1785993322379624 1.1680662176459362 1.2197976060929123 1.0 12.503961973306332 -10.785466475854205 0.7132594996295087 0.9833599566459638 1.1543485544793515 0.0 0.07999256899311748 0.4793552699430449 0.3636138926982023 0.050088344281914915 0.008720449476813384 1.6388285611815445e-11 10.785466475854205 0.1709885978333877 RDS(ph)ALQQLR ddPTM_A549_MK2206_60min_R1 2 RDSALQQLR 9 1 H7BZW2;Q6P2H3-3;Q6P2H3-4;Q6P2H3-2;Q6P2H3 H7BZW2 CEP85 Centrosomal protein of 85 kDa 1 RDS(1)ALQQLR;RDS(1)ALQQLR 113.22 0.00010307 12036500.0 781.24 1051.54 781.06 854.81 1237.78 1150.5900000000001 818.6400000000001 1164.48 1552.27 1030.48 1529.22 True False 913.094212515817 1105.0588945095174 891.8260527111987 1064.2384883738796 1055.7042016772505 1272.3446701001708 967.3762913522016 1329.5486060704347 1200.683323465827 797.6938523005575 1149.4724696750793 0.7943593575354796 0.9613617756516463 0.7758568180091261 0.9258494800442739 0.918424955384678 1.1068944265014227 0.8415828276649804 1.1566598079954515 1.0445516140157958 0.6939651651909864 1.0 10.166756198009296 -6.894457808177635 1.9598853009597657 1.0234575293224264 0.857728066145012 0.06533385669558467 0.13278307548177934 0.22607019179187762 1.7561730447487578 0.011996682393254899 0.02608865811694033 1.275093969638865e-07 6.894457808177635 -0.16572946317741444 RDS(ph)ALQQLR ddPTM_A549_PD325901_60min_R1 1 RDSALQQLR 9 1 H7BZW2;Q6P2H3-3;Q6P2H3-4;Q6P2H3-2;Q6P2H3 H7BZW2 CEP85 Centrosomal protein of 85 kDa 1 RDS(1)ALQQLR 118.9 6.6734e-05 9265900.0 969.15 553.64 722.77 837.88 641.67 634.13 714.54 895.63 752.1 950.42 977.0 True False 1067.5373945494782 600.297185799749 771.8215185690864 889.6339446364548 596.6013128413263 628.9658555251316 741.7322107112914 877.7659570418572 720.4918524982025 890.410319000308 856.8351937132766 1.2459075005113633 0.7005981899485642 0.900781765539105 1.0382789492819942 0.6962847899090469 0.7340569810156549 0.8656649681916518 1.0244279920831365 0.8408756523828097 1.0391850446076176 1.0 9.74287392844466 -5.238849731916999 23.980843415794403 0.8949302865581449 1.245908165937224 0.40097615689710464 0.1265217967205774 2729.567049218362 2897593.1022965857 0.0168569729582595 1.1489295048359058 5.769660620291036e-06 5.238849731916999 0.3509778793790791 RDS(ph)APTENR ddPTM_A549_MK2206_60min_R1 2 RDSAPTENR 9 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RDS(0.98)APT(0.02)ENR;RDS(0.982)APT(0.018)ENR 59.542 0.007298600000000001 3165800.0 182.83 450.26 282.28999999999996 277.07 359.62 100.16 0.0 0.0 153.46 460.78 314.6 True False 213.68723423565982 473.1763107840452 322.3229667629177 344.9521624381451 306.72037438573335 110.75886471917292 0.0 0.0 118.70155502526357 356.68947797439154 236.47613748170954 0.9036312776048604 2.0009473929294175 1.3630253360673572 1.4587186940366266 1.297045772364482 0.4683722674882562 0.0 0.0 0.5019599706310521 1.5083529432308154 1.0 7.885550800089069 -7.162189774817513 4.508014113273252 0.6138817785530042 1.4561631478428467 0.4405439784758569 0.4626301445833053 0.1625828917503135 5.591694185261871 0.06480140002346513 0.11414767393833866 6.883514398523308e-08 7.162189774817513 0.8422813692898425 RDS(ph)ASYR ddPTM_A549_MK2206_60min_R1 4 RDSASYR 7 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 RDS(0.998)AS(0.002)YR;RDS(0.894)AS(0.105)YR;RDS(1)ASYR;RDS(1)ASYR 91.867 0.0087464 615040000.0 1570.67 1339.7 1296.25 1202.86 1459.4299999999998 1038.0500000000002 1502.89 1369.6100000000001 1891.23 2110.9399999999996 2290.74 True False 1835.7606968053597 1407.8850076786428 1480.07774156517 1497.5607539984371 1244.749780295231 1147.8957619981768 1775.9456592767406 1563.7564117547124 1462.8694246737214 1634.077187888498 1721.8860367922812 1.0661336799183392 0.8176412245617636 0.859567770421335 0.8697211789859555 0.7228990500521671 0.666650252961342 1.031395586774818 0.9081648717402053 0.8495738936352115 0.9490042621709371 1.0 10.749773945634136 -10.919985434551057 0.5266734426981469 1.037090992741365 0.8546085838369555 0.11748256923029476 0.11069197112001783 2.3102143575675633 0.7726806543596584 0.2187201091359834 0.025229175802970957 1.2023047570613392e-11 10.919985434551057 -0.18248240890440948 RDS(ph)ASYR ddPTM_A549_PD325901_60min_R1 7 RDSASYR 7 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 RDS(1)ASYR;RDS(0.983)AS(0.017)YR;RDS(0.983)AS(0.017)YR;RDS(0.999)AS(0.001)YR;RDS(0.957)AS(0.043)YR;RDS(1)ASYR;RDS(0.999)AS(0.001)YR 99.815 0.004743 865133700.0 3434.79 3278.2799999999997 2945.3399999999997 3245.3199999999997 3877.75 2785.77 3401.66 2823.98 3631.12 3842.4399999999996 3445.71 True False 3783.487352241244 3554.552160724659 3145.22848416823 3445.776045743518 3605.3902175112626 2763.0836127390994 3531.1120327597764 2767.653503530547 3478.516653959941 3599.827682645087 3021.90951415535 1.2520187432874745 1.1762602897519874 1.0408082933771592 1.1402644684106773 1.1930834462854527 0.9143502145898652 1.1685035624724036 0.9158624672797757 1.1510988789259684 1.1912427112005273 1.0 11.561244746808185 -2.000000000003538 0.5129631967956076 1.0618395489180092 7.713303228159612 0.21744882733651905 0.09855912578244877 98.63895111045494 0.906459200689693 0.016540543620707598 715.9261741232555 0.009999999999918532 2.000000000003538 6.651463679241603 RDS(ph)ASYRDR ddPTM_A549_PD325901_60min_R1 1 RDSASYRDR 9 2 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 RDS(1)ASYRDR 104.17 0.00020372 286540000.0 1230.0 1042.0 1389.0 1216.5 1508.3 1754.1 1709.2 1296.1 1706.2 1496.0 1750.8 True False 1354.8686945218572 1129.8129968993176 1483.265892735531 1291.6404421280456 1402.3622113525219 1739.815191170001 1774.244541310127 1270.248268729219 1634.4943474703264 1401.5423046910435 1535.4626992356255 0.8823846357168621 0.7358127276304101 0.9660058127585394 0.8412060043992226 0.9133157139216974 1.1330885419985162 1.1555113271024886 0.8272739346657957 1.0644962904562907 0.9127817337332588 1.0 10.58445775022796 -7.04905940778062 6.285264565850254 1.0310538096363135 0.8577915336207603 0.3533500366828205 0.10045787984966821 0.1524481821033351 14.693054252412505 0.013393317168245607 0.023608006431646268 8.931832955203035e-08 7.04905940778062 -0.17326227601555322 RDS(ph)DGVDGFEAEGK ddPTM_A549_MK2206_60min_R1 4 RDSDGVDGFEAEGK 14 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK 154.6 2.8045e-19 315573000.0 10682.3 9795.4 8933.900000000001 8935.4 12070.5 9806.8 9725.3 8885.9 13042.5 12702.699999999999 13172.199999999999 True False 12485.211082839729 10293.944020463818 10200.8613580475 11124.573401125353 10294.945439694658 10844.549066773012 11492.261123677767 10145.503536927443 10088.394574592732 9833.1512475917 9901.179205774242 1.2609822348795092 1.0396684886241145 1.0302673192803626 1.1235604537525836 1.0397696300346504 1.0952785361614916 1.1606962044455902 1.024676286134758 1.0189083911044967 0.9931293074523014 1.0 13.273384641471736 -2.000000001816054 0.1191062992527613 0.962099324420665 1.5379589355652445 0.3623337310143626 0.06235306426799762 69.91909236920095 0.5527562485562751 0.22614784453909703 6.716742684580377 0.009999999958183813 2.000000001816054 0.5758596111445795 RDS(ph)DGVDGFEAEGK ddPTM_A549_PD325901_60min_R1 3 RDSDGVDGFEAEGK 14 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK 214.81 1.4706999999999998e-38 323689000.0 22045.0 24352.6 21405.0 21744.0 25460.300000000003 22566.4 20684.7 21064.5 21314.4 24135.6 29672.2 True False 24282.99217132874 26404.879067457143 22857.672018721434 23087.077495793023 23672.05636126671 22382.626720266086 21471.867577602156 20644.352022719417 20418.62989082262 22611.674096992738 26022.707507573283 0.933146259445208 1.014686079831341 0.8783740897087383 0.8871896780561394 0.9096692323186405 0.8601190600075784 0.8251204288159979 0.7933206802832248 0.7846466354386941 0.8689208872832374 1.0 14.66748345323231 -5.776800090739588 24.66441052249039 0.8810072911081215 0.973916159763136 0.30204211029641603 0.05956689328586712 249.7255289516173 400981.90383580636 0.0117943799596781 0.036870655923990435 1.6718600078933177e-06 5.776800090739588 0.09290886865501446 RDS(ph)DGVDGFEAEGKK ddPTM_A549_MK2206_60min_R1 4 RDSDGVDGFEAEGKK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK 160.57 2.3649e-20 217980000.0 31334.1 34661.1 30321.9 27738.4 45281.7 32579.1 31044.500000000004 33715.5 49831.0 47318.2 46058.9 True False 36622.53003480602 36425.2019404719 34622.00136699322 34534.309245224096 38620.821914305285 36026.598737743654 36684.88380348315 38494.775374388344 38544.35806375544 36628.98575608285 34621.20396902835 1.0578063682466974 1.0521067370463888 1.000023032069179 0.9974901299249446 1.1155250969566206 1.0405934689611762 1.0596073965625499 1.111884364530628 1.1133165125694846 1.05799283551348 1.0 15.079368275540668 -6.732720121235427 24.999894149356827 1.062204135287791 1.0267434925091663 0.22332414880288498 0.03749245972452736 404.19175819957945 351843.797091289 0.007061404612801373 0.014697809582574961 1.8504607543765013e-07 6.732720121235427 -0.035460642778624596 RDS(ph)DGVDGFEAEGKK ddPTM_A549_PD325901_60min_R1 2 RDSDGVDGFEAEGKK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK 146.19 2.4332e-14 251320000.0 14105.7 14252.2 14076.6 13841.400000000001 15097.8 16159.5 14690.2 16295.0 16821.6 17308.0 18610.4 True False 15537.700279932502 15453.282912100256 15031.922725472283 14696.351841899826 14037.382612582438 16027.902389665156 15249.243599785885 15969.983441819792 16114.64665068975 16215.16992619824 16321.43878104561 0.9519810409102365 0.9468088640596097 0.9209925011592197 0.9004323723572074 0.8600579152914087 0.982015287051694 0.9343075573395597 0.9784666447645554 0.9873300305732843 0.9934890020253127 1.0 13.994480620117825 -8.149262626148566 1.1522273714540514 0.9950623588110139 0.9208871916040184 0.5353055338926822 0.02852828472722086 0.24571132337986146 0.6419441403863783 0.005372348318312178 0.007411308029513181 7.0914880248116916e-09 8.149262626148566 -0.07417516720699546 RDS(ph)DTYR ddPTM_A549_MK2206_60min_R1 2 RDSDTYR 7 1 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 RDS(0.946)DT(0.054)YR;RDS(0.905)DT(0.095)Y(0.001)R 128.27 0.0024105 160738000.0 1824.51 2472.6 2262.49 1858.8899999999999 3183.7 2691.1000000000004 2312.5 2641.1 3123.5 2959.8 2857.6 True False 2132.4426830132006 2598.444778671502 2583.345102807162 2314.318133448743 2715.381947421888 2975.8704157923935 2732.651316515154 3015.484013029528 2416.032237204554 2291.1791243296243 2147.9790542521732 0.9927669819646441 1.20971606940374 1.202686356597906 1.0774398050424572 1.2641566229644907 1.385428042187522 1.2721964448887686 1.40387030639802 1.1247932015080586 1.066667349383119 1.0 11.068764209794606 -9.305288520301056 1.857989744985104 1.038950383841594 1.2268925952948988 0.27899910842260256 0.11538755439737128 0.26453442943447325 1.878771418738689 0.025481205346215077 0.02258023162103882 4.951211514740022e-10 9.305288520301056 0.1879422114533047 RDS(ph)DTYR ddPTM_A549_PD325901_60min_R1 3 RDSDTYR 7 1 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 RDS(0.922)DT(0.078)YR;RDS(0.976)DT(0.024)YR;RDS(0.914)DT(0.086)YR 123.5 0.0026125999999999996 219286000.0 3229.04 2754.04 2933.7 2734.8999999999996 3355.31 2679.29 2542.54 2411.39 3976.7700000000004 2902.8199999999997 3639.9399999999996 True False 3556.8497637063892 2986.13261610422 3132.798523771225 2903.8285615914447 3119.6446007911068 2657.4707505557667 2639.2977510312735 2363.2929347511413 3809.640186490197 2719.535449801639 3192.2504554807642 1.1142138793024983 0.9354318082960372 0.9813761694019132 0.9096493530468046 0.9772555895277575 0.8324756430038764 0.8267827940943268 0.7403219038448601 1.193402660480301 0.8519179455773834 1.0 11.64035813067885 -8.77626709032836 24.998071760902267 1.0913290257637969 0.9138497361736057 0.026215994664966713 0.1241705017588774 198.4431108603169 334554.5435042169 0.019898950599785196 0.021226616344118206 1.6739131058440962e-09 8.77626709032836 -0.1774792895901912 RDS(ph)EEEFGS(ph)ERDEYREK ddPTM_A549_PD325901_60min_R1 1 RDSEEEFGSERDEYREK 17 3 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 RDS(1)EEEFGS(1)ERDEYREK 52.909 0.0050912 8397500.0 646.85 515.67 520.61 559.75 705.07 625.63 502.71 600.74 643.33 668.67 919.91 True False 712.5177358141983 559.1273206440221 555.94172528225 594.3244862155149 655.5483155594528 620.5350767069654 521.8409041434675 588.757769428587 616.2930773403384 626.4500620840639 806.7669017899495 0.8831767072166156 0.6930469252066528 0.6890983306935359 0.7366743540134144 0.8125622334096843 0.7691627846038339 0.6468298376962103 0.7297743228215335 0.7639047610567408 0.7764945000770085 1.0 9.656008087306423 -10.418245069233487 0.6945345494088905 1.0078288152282153 0.7406065389157488 0.11849141500836802 0.08856589379114733 0.3203251962321035 0.2707471744336265 0.046926110495751704 0.01260979113469686 3.817288032509629e-11 10.418245069233487 -0.26722227631246653 RDS(ph)EEEFGSER ddPTM_A549_PD325901_60min_R1 1 RDSEEEFGSER 11 1 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 RDS(1)EEEFGSER 52.343999999999994 0.033777999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RDS(ph)EEEFGSERDEYR ddPTM_A549_MK2206_60min_R1 3 RDSEEEFGSERDEYR 15 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 RDS(0.984)EEEFGS(0.016)ERDEYR;RDS(0.994)EEEFGS(0.005)ERDEYR;RDS(0.999)EEEFGS(0.001)ERDEYR 54.763999999999996 0.0050273 8879400.0 489.33 491.27 540.5799999999999 616.8599999999999 686.95 737.09 397.63 650.55 896.46 742.11 930.74 True False 571.9169410301117 516.2735446161726 617.2423726405395 767.9907276918972 585.9005649971623 815.0883745592567 469.87422399391176 742.7674547258187 693.4132413524555 574.4668355822212 699.611570882792 0.8174778188823391 0.7379431188719796 0.8822643854527501 1.0977387448335398 0.8374655156973096 1.1650584531224268 0.6716215733839417 1.0616854918345207 0.9911403273068866 0.8211225478408551 1.0 9.450410339979369 -5.994954849541865 5.740670428640605 0.9838776019558543 0.7829059086473672 0.18471579200097565 0.13514365733560119 0.12892782164501393 15.676176649146115 0.015239396928730064 0.04607458036200024 1.0116846263307983e-06 5.994954849541865 -0.20097169330848708 RDS(ph)EEEFGSERDEYR ddPTM_A549_PD325901_60min_R1 2 RDSEEEFGSERDEYR 15 2 Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 RDS(0.989)EEEFGS(0.011)ERDEYR;RDS(0.98)EEEFGS(0.019)ERDEYR 60.034 0.0018867 8446200.0 697.52 783.13 828.9100000000001 719.51 787.88 1004.54 923.26 806.9000000000001 1190.42 765.8199999999999 960.0799999999999 True False 768.331716912916 849.1271134949742 885.1648172407558 763.9524985742297 732.5420268384438 996.3593592941754 958.3951645272568 790.8057464991954 1140.3907871970623 717.4659945043408 841.9962464485596 0.9125120452183108 1.008469000991978 1.051269315004997 0.9073110501341197 0.8700062855721973 1.1833299299096653 1.1382416116100922 0.9392034107452619 1.3543893954481334 0.8521011792279684 1.0 9.717669991662454 -7.271472745751202 24.651232867552192 1.1508078989324066 0.9564306912056498 0.053230166017458 0.14235657394231108 559.9462829149511 1375744.8189220654 0.02174564862734272 0.03501087259823563 5.35213740177174e-08 7.271472745751202 -0.19437720772675682 RDS(ph)ELGPGVK ddPTM_A549_MK2206_60min_R1 2 RDSELGPGVK 10 1 O95466-2;O95466;O95466-3;K7EK60;A0A0A0MR62 O95466-2 FMNL1 Formin-like protein 1 1 RDS(1)ELGPGVK;RDS(1)ELGPGVK 109.79 8.532e-05 48098000.0 9429.9 10564.8 9508.8 8997.3 11961.4 9751.7 9572.1 9724.3 14117.599999999999 14732.6 14386.2 True False 11021.436581079954 11102.503194090707 10857.290822754017 11201.63890390414 10201.893905170764 10783.618421345427 11311.226666730689 11102.749304419762 10919.986141174644 11404.49542776492 10813.709501078738 1.01920960425102 1.0267062558859343 1.0040301916443133 1.035873850946958 0.943422227511573 0.9972173212411237 1.0460080017502154 1.0267290149889998 1.009827954050856 1.0546330495217433 1.0 13.400573885119137 RDS(ph)ELGPGVK ddPTM_A549_PD325901_60min_R1 2 RDSELGPGVK 10 1 O95466-2;O95466;O95466-3;K7EK60;A0A0A0MR62 O95466-2 FMNL1 Formin-like protein 1 1 RDS(1)ELGPGVK;RDS(1)ELGPGVK 157.67 5.496e-09 128250000.0 13418.3 12912.7 14613.6 11213.0 15078.9 13200.0 12966.8 13320.0 12637.5 13794.3 15249.4 True False 14780.515937969629 14000.89854612459 15605.36677471559 11905.601543429333 14019.810083380979 13092.503576446048 13460.258669705225 13054.32215066215 12106.389823090063 12923.325543850038 13373.8204739112 1.1051827685890148 1.0468884768893567 1.1668592983700916 0.8902169403764634 1.04830254830547 0.9789651058937177 1.0064632388301191 0.9761101680800706 0.9052304722279202 0.9663151654428173 1.0 13.707124035812493 -6.25948262512679 24.999911379958036 0.9643600636965265 1.100368010557277 0.5942927009528678 0.04930634663571207 96.13374757241206 1228213.6024389253 0.007384886640918915 0.01851090704772847 5.50195931827302e-07 6.25948262512679 0.13600794686075057 RDS(ph)FAGNGPR ddPTM_A549_MK2206_60min_R1 2 RDSFAGNGPR 10 1 Q9Y6Q6-6;Q9Y6Q6;Q9Y6Q6-2;Q9Y6Q6-3 Q9Y6Q6-6 TNFRSF11A Tumor necrosis factor receptor superfamily member 11A 1 RDS(1)FAGNGPR;RDS(1)FAGNGPR 125.03 7.1402e-06 29705000.0 2299.9 2888.8 2737.3 2394.42 3592.6000000000004 3115.8 2610.9 2653.6 4064.2999999999997 5008.4 3989.1000000000004 True False 2688.066892843591 3035.8275809375723 3125.4903004716225 2981.0530074895996 3064.1332990884425 3445.5118878993503 3085.266733962993 3029.755926309172 3143.7425393534386 3876.998961515133 2998.496376440838 0.8964716162286241 1.0124499748574136 1.0423525354336176 0.9941826279703752 1.0218899456285202 1.1490798904980208 1.0289379564384031 1.010425075085613 1.0484396659785213 1.2929810394225194 1.0 11.550023514029402 -5.265047367403224 3.460008105585705 1.0302775414398595 0.880343766753154 0.15443155171072864 0.08857421321213473 0.19929886524589022 4.068667033044604 0.005614854865838083 0.07771718699717997 5.431910837806959e-06 5.265047367403224 -0.14993377468670555 RDS(ph)FAGNGPR ddPTM_A549_PD325901_60min_R1 2 RDSFAGNGPR 10 1 Q9Y6Q6-6;Q9Y6Q6;Q9Y6Q6-2;Q9Y6Q6-3 Q9Y6Q6-6 TNFRSF11A Tumor necrosis factor receptor superfamily member 11A 1 RDS(1)FAGNGPR;RDS(1)FAGNGPR 110.92 7.2836e-05 37364000.0 5459.6 5797.700000000001 5919.6 6448.9 7716.9 6467.9 5969.1 6415.3 7375.3 6294.1 6552.299999999999 True False 6013.854572854903 6286.2925260299235 6321.339653446546 6847.23390648545 7174.891565859752 6415.2275668254115 6196.257366916854 6287.341808794511 7065.341789296627 5896.689451842177 5746.408638451895 1.0465414054638236 1.0939515306943912 1.1000504926063768 1.1915675228293756 1.2485870771266094 1.1163890301671444 1.0782834561146264 1.0941341287013562 1.2295230349646797 1.0261521278498509 1.0 12.488444874070266 -11.065300395385579 1.3838660793995867 1.0001581121464456 1.1447281798159594 0.34391730218436456 0.0622341622113775 0.369984729403066 1.2666748957665581 0.04930295306445804 0.01096751337575142 8.603984208294071e-12 11.065300395385579 0.14457006766951386 RDS(ph)FDDR ddPTM_A549_MK2206_60min_R1 2 RDSFDDR 7 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(1)FDDR;RDS(1)FDDR 78.655 0.013403 104666000.0 1493.47 1343.4299999999998 1111.69 983.27 1838.92 1056.5 915.85 999.4000000000001 1346.48 1332.54 1496.13 True False 1745.531224164146 1411.8048487465253 1269.3443583572493 1224.171194140667 1568.4173040025948 1168.2981287520586 1082.2480900455807 1141.0680105341373 1041.504429886725 1031.518288510777 1124.5996299126198 1.5521356914369355 1.2553844152129243 1.1287077859485657 1.088539566953071 1.3946450472551366 1.038856938662548 0.9623407844529259 1.014643772044276 0.9261113041337642 0.9172315738632467 1.0 10.135195761886132 -7.426928150044875 5.258906794106056 0.9696446016027794 1.2619483761790935 0.621708086661833 0.11976103812416719 0.12310167645271866 5.314673127814632 0.017677872221963015 0.02836445952754872 3.741724864856613e-08 7.426928150044875 0.29230377457631407 RDS(ph)FDDR ddPTM_A549_PD325901_60min_R1 2 RDSFDDR 7 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(1)FDDR;RDS(1)FDDR 70.1 0.017296000000000002 95945000.0 647.97 981.5799999999999 698.15 929.38 883.8800000000001 617.36 842.54 683.74 813.22 949.85 944.63 True False 713.7514373896973 1064.3011914553092 745.5306573169992 986.7856918248777 821.7993180204647 612.3324248450557 874.6033207555786 670.1022693163469 779.0431914487275 889.8763088975847 828.4464985029404 0.861554051685287 1.284695141301912 0.8999140664656369 1.1911278442338367 0.9919763310069056 0.7391333368558892 1.055714910179531 0.8088660770819451 0.9403663276463984 1.074150606593971 1.0 9.69426472024885 -6.991100181781771 24.9169709826384 0.9466685487338576 1.06747418248733 0.13545663495933036 0.14335011076849966 271.01416423031145 758756.1921867928 0.01792774791069363 0.03384588908605596 1.0207040035324655e-07 6.991100181781771 0.12080563375347231 RDS(ph)FDDRGPSLNPVLDYDHGSR ddPTM_A549_MK2206_60min_R1 4 RDSFDDRGPSLNPVLDYDHGSR 22 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(0.924)FDDRGPS(0.076)LNPVLDYDHGSR;RDS(0.961)FDDRGPS(0.039)LNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR 163.09 1.1525999999999999e-33 136330000.0 1884.3200000000002 2218.6000000000004 1920.03 1974.07 2700.2599999999998 1906.22 1466.2599999999998 1729.76 2614.75 2345.3 2364.16 True False 2202.3471487990937 2331.517263593219 2192.3191252747356 2457.7172386193697 2303.055331012792 2107.934935153572 1732.660462423139 1974.958777167831 2022.5132998977444 1815.49510111841 1777.0738245033654 1.2393110057847925 1.31199797748684 1.2336680080735631 1.3830135837526176 1.2959817984243966 1.1861830983542125 0.9750075874913985 1.1113543792812142 1.1381143945795114 1.021620529257293 1.0 10.795287900768459 -7.5046570860049835 3.9013473684613134 1.0648999656439615 1.2936041666668627 0.7969670989229142 0.05825479549093227 0.08879586222089277 2.9975017681849048 0.010247296591028953 0.016152094755330783 3.128548658654936e-08 7.5046570860049835 0.22870420102290123 RDS(ph)FDDRGPSLNPVLDYDHGSR ddPTM_A549_PD325901_60min_R1 4 RDSFDDRGPSLNPVLDYDHGSR 22 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(0.999)FDDRGPS(0.001)LNPVLDYDHGSR;RDS(0.997)FDDRGPS(0.003)LNPVLDYDHGSR;RDS(0.999)FDDRGPS(0.001)LNPVLDYDHGSR;RDS(0.977)FDDRGPS(0.023)LNPVLDYDHGSR 160.33 1.8832e-33 157751000.0 4093.11 4411.320000000001 4005.4500000000003 4120.83 5713.1900000000005 4740.09 4889.64 4054.07 6212.599999999999 6180.77 6127.25 True False 4508.639514011676 4783.077417928887 4277.283923727526 4375.364310016043 5311.9152438355195 4701.488278611833 5075.717925913677 3973.208393493611 5951.506026898463 5790.515127383195 5373.637093837951 0.8390294013679889 0.8901005658558019 0.7959755839545558 0.8142277257675913 0.9885139526684432 0.8749173411809138 0.9445591202528538 0.7393890439772649 1.1075377668736068 1.0775783749935934 1.0 12.391683177542903 -8.775143052758304 24.999950843705168 1.050781730860282 0.8656144079119944 0.6242122469669196 0.06919708970853664 116.9456793334942 213346.15462992137 0.012482285392222611 0.013322418912419053 1.6782511260023334e-09 8.775143052758304 -0.18516732294828764 RDS(ph)FDNCSLGESSK ddPTM_A549_MK2206_60min_R1 2 RDSFDNCSLGESSK 14 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(1)FDNCSLGESSK;RDS(1)FDNCSLGESSK 158.5 1.0875e-34 22344000.0 2478.4 2547.0 2567.6 1769.2 3258.7 2710.7 2110.2 2451.9 3446.3 2967.7 2965.6 True False 2896.6933289375893 2676.6314208834087 2931.724288711847 2202.654079422405 2779.349546773788 2997.5444747829683 2493.5960251287697 2799.4643336288295 2665.7185526102285 2297.2945088428355 2229.1596736038086 1.2994552894699558 1.200735619156517 1.3151701618449902 0.9881096026923218 1.246814922988673 1.344697066916224 1.1186260251592726 1.2558384070814579 1.1958401114894788 1.0305652556188922 1.0 11.122284244492539 -10.49802729013037 0.5707009031390748 0.9760614212978898 1.2218585903371857 0.4058338694597807 0.09465136729563553 0.7937824740611895 0.4069687151099864 0.09944065985005747 0.020596307746381885 3.1766744489937505e-11 10.49802729013037 0.24579716903929594 RDS(ph)FDNCSLGESSK ddPTM_A549_PD325901_60min_R1 2 RDSFDNCSLGESSK 14 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(1)FDNCSLGESSK;RDS(0.989)FDNCS(0.011)LGESSK 160.95 1.4192999999999998e-19 70155000.0 11041.3 11879.099999999999 11355.5 9847.1 10573.8 10414.3 10752.7 11567.599999999999 9708.900000000001 10368.0 11800.900000000001 True False 12162.20464782454 12880.193446705069 12126.152516168713 10455.333002613299 9831.132765629709 10329.489393650161 11161.89988260321 11336.87514339335 9300.86869660923 9713.362710586047 10349.464112068585 1.175153081949635 1.2445275723682525 1.1716696038424173 1.010229407957583 0.949917083548853 0.9980699755850034 1.0785002741917078 1.0954069718617931 0.8986811873441273 0.9385377450856827 1.0 13.337268447479204 -6.2563339768016135 3.0893771855282717 0.9752917553115141 1.21024873670419 0.7024941183455626 0.057744582225277716 0.11099168236104838 2.1580319761409457 0.009680773625044875 0.02701349286350534 5.541993641899712e-07 6.2563339768016135 0.23495698139267596 RDS(ph)FIGTPYWMAPEVVMCETSK ddPTM_A549_MK2206_60min_R1 5 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.689)FIGT(0.24)PY(0.07)WMAPEVVMCETSK;RDS(0.991)FIGT(0.009)PYWMAPEVVMCETSK;RDS(0.999)FIGT(0.001)PYWMAPEVVMCETSK;RDS(0.993)FIGT(0.007)PYWMAPEVVMCETSK;RDS(0.999)FIGT(0.001)PYWMAPEVVMCETSK 126.52 8.784200000000001e-17 69971700.0 13200.65 15500.650000000001 14475.189999999999 13515.49 22389.92 18551.66 15943.529999999999 16906.260000000002 24443.879999999997 20187.07 20695.58 True False 15428.596995093596 16289.5668763708 16527.98960380077 16826.78565673339 19096.392427747684 20514.784347604746 18840.263024604916 19302.774128249814 18907.380208855328 15626.796866470984 15556.296317049328 0.991791148782903 1.047136577008875 1.0624630224924738 1.0816704255171352 1.2275667702998494 1.3187447660739808 1.2111020927234744 1.2408335335637979 1.2154165633971175 1.0045319623633286 1.0 13.925211000217578 -6.438921284744903 3.253542401754949 1.1470715347976053 1.0348769018921804 0.2759927942980125 0.09486647337183428 0.38380904169689645 7.771887616539014 0.01677862025524114 0.041350909421909256 3.6398100118604617e-07 6.438921284744903 -0.11219463290542486 RDS(ph)FIGTPYWMAPEVVMCETSK ddPTM_A549_PD325901_60min_R1 7 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.998)FIGT(0.002)PYWMAPEVVMCETSK;RDS(0.995)FIGT(0.005)PYWMAPEVVMCETSK;RDS(0.918)FIGT(0.057)PY(0.025)WMAPEVVMCETSK;RDS(1)FIGTPYWMAPEVVMCETSK;RDS(0.999)FIGT(0.001)PYWMAPEVVMCETSK;RDS(0.994)FIGT(0.006)PYWMAPEVVMCETSK;RDS(0.999)FIGT(0.001)PYWMAPEVVMCETSK 128.03 3.2176999999999995e-22 115845500.0 22828.6 22208.1 24459.3 24933.2 27127.8 27337.1 28124.799999999996 28699.4 24398.0 26821.2 28410.800000000003 True False 25146.142666472904 24079.65452633372 26119.25518371936 26473.267136594313 25222.43691382942 27114.475721186613 29195.104654481085 28126.967952756248 23372.63690633047 25127.70485466537 24916.451710899877 1.0092184456373676 0.9664158767759017 1.0482734655309411 1.0624814256764095 1.0122804485357635 1.0882157714826304 1.1717199942120764 1.128851261773036 0.9380403428834109 1.008478460184324 1.0 14.60481101197356 -8.776111270731548 24.999993590479367 0.9707412708248518 1.0603919080484263 0.2722637352653353 0.056504614591290594 214.18763535697337 364961.12934683805 0.010877780553087062 0.01160434670331513 1.6745137933332673e-09 8.776111270731548 0.08965063722357447 RDS(ph)FLAQTK ddPTM_A549_MK2206_60min_R1 1 RDSFLAQTK 9 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(1)FLAQTK 83.617 0.00059344 2260400.0 944.26 860.4 408.21 772.67 976.42 644.9 616.12 585.78 1021.0 965.67 938.25 True False 1103.6280030594758 904.1906849344658 466.100316207767 961.9741846864744 832.7899114557528 713.1428899500263 728.0610288135429 668.8161088760125 789.7451302019685 747.5244763130574 705.2566306173369 1.5648601589090056 1.2820732846467457 0.6608946246982071 1.3640058709471803 1.1808324449594771 1.0111821129930907 1.0323348937198145 0.9483301252915175 1.119798235020741 1.059932574697982 1.0 9.462004514447722 -5.524286711487273 24.999588835250037 1.052076796130177 1.4941635813268594 0.482447136264181 0.1629513733707742 22.129863339300563 392948.82906148344 0.02053647004567706 0.08079530326765344 2.9902898624545995e-06 5.524286711487273 0.44208678519668254 RDS(ph)FLAQTK ddPTM_A549_PD325901_60min_R1 1 RDSFLAQTK 9 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(1)FLAQTK 125.03 3.3244e-05 5541700.0 1245.0 1464.8 1345.9 1338.2 1892.1 1251.1 1291.6 1305.3 1486.7 1171.8 1347.8 True False 1371.3914834794414 1588.2438367160476 1437.2408675541778 1420.8575747272928 1759.2054233906413 1240.9114564008828 1340.7525447906394 1279.2647675119592 1424.2191691385149 1097.8123480193606 1182.0291444081422 1.160201074539592 1.3436587788292669 1.2159098397474992 1.2020495276694172 1.4882927647875375 1.0498146025174564 1.1342804457346711 1.0822616122147346 1.2048934460508929 0.9287523520150173 1.0 10.207049892068174 -7.314034505270931 24.999995407104123 1.0979936062285889 1.277331440852471 0.4895676420985957 0.10686523996254153 245.49487950790075 116690.41797643754 0.015461074567592496 0.024716247884580062 4.852499448806551e-08 7.314034505270931 0.1793378346238821 RDS(ph)GDNSAPSGQER ddPTM_A549_PD325901_60min_R1 3 RDSGDNSAPSGQER 14 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 RDS(1)GDNSAPSGQER;RDS(0.996)GDNS(0.004)APSGQER;RDS(1)GDNSAPSGQER 84.566 0.00018806 23740600.0 692.19 788.64 764.77 818.13 711.32 664.39 802.79 780.0799999999999 782.79 946.0799999999999 947.37 True False 762.4606192366547 855.101460532321 816.6718911356033 868.6640319919586 661.3593371207817 658.9794281178024 833.3406127535438 764.5206924390783 749.892058525552 886.3443473409767 830.8494958732314 0.9176880085066438 1.0291893595405033 0.9829360133116201 1.0455130999134612 0.7960037773456025 0.7931393488121555 1.0029982769354566 0.9201674866945176 0.9025606469645958 1.066792905024778 1.0 9.69844335362682 RDS(ph)GSFEQYSENIK ddPTM_A549_MK2206_60min_R1 2 RDSGSFEQYSENIK 14 1 Q8IZT6;Q8IZT6-2;Q5VYL4 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 RDS(0.744)GS(0.256)FEQYSENIK;RDS(0.778)GS(0.218)FEQY(0.003)SENIK 129.25 4.5288e-09 27453000.0 3848.7 4055.5 3546.3999999999996 4176.5 4635.3 3735.6000000000004 4336.5 4238.2 5416.2 5540.4 5524.3 True False 4498.266468319115 4261.907627558955 4049.332846817142 5199.742687490208 3953.4535103447793 4130.898712509407 5124.385917434799 4838.977828943145 4189.439347894124 4288.819792025086 4152.463847076315 1.0832764917354487 1.026356347583784 0.9751639017081906 1.2522066125033853 0.9520741554747898 0.9948066653049632 1.2340591287851428 1.1653269016057044 1.0089044726647873 1.0328373587273438 1.0 12.019751892254732 -8.952943520965466 24.931751420987585 1.0039283645398844 1.0830847229151286 0.09879725111349946 0.09478792402400978 177.54081282634993 94065.97073630526 0.016187315822156552 0.017227878695576907 1.1144394545485365e-09 8.952943520965466 0.07915635837524415 RDS(ph)GVGASLTR ddPTM_A549_MK2206_60min_R1 1 RDSGVGASLTR 11 1 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8;Q92502;Q92502-2;Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 H3BRG5;Q96QB1-4 STARD13;STARD8;DLC1 StAR-related lipid transfer protein 13;StAR-related lipid transfer protein 8;Rho GTPase-activating protein 7 1 RDS(1)GVGASLTR 92.8 0.00012225 12126000.0 1035.2 1213.3 913.6 949.22 1211.1 983.57 1149.0 1031.0 1956.3 1469.4 1442.7 True False 1209.916451789942 1275.0517875766939 1043.1622177002425 1181.7789426121046 1032.9487943344689 1087.6507245590751 1357.7584271030976 1177.1474073050792 1513.201173569158 1137.4615194573785 1084.437773505602 1.1157085093769021 1.1757722007920328 0.9619382902239468 1.08976187613959 0.952520116479632 1.0029627804674184 1.2520390383617375 1.085490966899631 1.395378518287422 1.048895148478985 1.0 10.082731556270243 -7.756500679777021 24.914977639168907 1.1867021441936858 1.0489083503912517 0.1469547435861398 0.11797462026183393 171.81847198290058 866793.9115820086 0.023530784966980932 0.03429437751175484 1.7518596921177834e-08 7.756500679777021 -0.13779379380243406 RDS(ph)GVGASLTR ddPTM_A549_PD325901_60min_R1 2 RDSGVGASLTR 11 1 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8;Q92502;Q92502-2;Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 H3BRG5;Q96QB1-4 STARD13;STARD8;DLC1 StAR-related lipid transfer protein 13;StAR-related lipid transfer protein 8;Rho GTPase-activating protein 7 1 RDS(1)GVGASLTR;RDS(0.999)GVGAS(0.001)LTR 63.42100000000001 0.0028201 12997000.0 3619.7 3712.4 2922.9 3302.3 3812.2 3820.5 3845.1 3346.6 3923.3 4138.1 4254.7 True False 3987.1692793176994 4025.2569766689307 3121.265570825547 3506.275570932547 3544.4442233760415 3789.3871146827373 3991.4273846194546 3279.8494376430863 3758.41734464326 3876.8196597874366 3731.3988727654873 1.0685454477726877 1.078752798594714 0.836486711084911 0.9396678539311203 0.9498969003946538 1.0155406173112425 1.0696866029927403 0.8789865542335494 1.007240842589886 1.0389721903180433 1.0 11.865500871834412 -7.2676832299531995 23.57841336835554 0.9994093663928367 0.9708309175184205 0.029620928910743194 0.07506400756483293 770.9239751379446 2911219.1149325594 0.011035039431173647 0.017913100944983537 5.399042797087871e-08 7.2676832299531995 -0.028578448874416185 RDS(ph)GVGSGLEAQESWER ddPTM_A549_MK2206_60min_R1 2 RDSGVGSGLEAQESWER 17 1 A0A0A0MTG6;Q12770-4;Q12770-2;Q12770 A0A0A0MTG6 SCAP Sterol regulatory element-binding protein cleavage-activating protein 1 RDS(1)GVGSGLEAQESWER;RDS(0.989)GVGS(0.011)GLEAQESWER 143.35 1.2823e-16 24861000.0 1358.62 1648.6599999999999 1499.99 1552.75 2206.24 1819.8 2042.74 1993.71 2593.0 2578.2 2374.2 True False 1587.921840930109 1732.569752003786 1712.7111371805895 1933.1738197055954 1881.705018588456 2012.3700281145261 2413.879416345154 2276.3244979808037 2005.6896401701304 1995.7828293623343 1784.620615413461 0.8897811821826451 0.9708336534050315 0.9597060139215015 1.0832407756635252 1.0544005837075363 1.1276178313385112 1.352600880824133 1.275522919729034 1.1238745214794306 1.118323307556296 1.0 10.80140169536724 -6.176518703905657 1.474494100544933 1.1049150718722025 0.9175470844146347 0.42511767752419005 0.09894165538025086 0.4817700739917826 1.9073701441939659 0.01798301988471068 0.07864381433092434 6.660108373693458e-07 6.176518703905657 -0.18736798745756778 RDS(ph)GVGSGLEAQESWER ddPTM_A549_PD325901_60min_R1 1 RDSGVGSGLEAQESWER 17 1 A0A0A0MTG6;Q12770-4;Q12770-2;Q12770 A0A0A0MTG6 SCAP Sterol regulatory element-binding protein cleavage-activating protein 1 RDS(0.997)GVGS(0.003)GLEAQESWER 112.18 1.5058e-09 10428000.0 3380.5 3587.0 3366.5 3649.6 3479.2 3372.8 3340.7 4219.3 4496.4 5371.0 6843.5 True False 3723.685871407432 3889.2890785775953 3594.9709344090493 3875.027503157019 3234.8329945884047 3345.333035048276 3467.832166601182 4135.14275152318 4307.431944652198 5031.874143379406 6001.792884520785 0.6204289190003848 0.6480212085639367 0.5989828378917962 0.6456449893749411 0.5389777782787802 0.5573889501712429 0.5777993731748162 0.68898458028902 0.717690867967385 0.8383951662772476 1.0 12.551177818588224 -9.939289781554631 0.5297445214542019 1.0118634847529693 0.5946593254972007 0.7963851574292017 0.05874984680087514 0.1806514578234919 0.10036564359439742 0.033823956043813226 0.01203034617247142 1.1500327773180943e-10 9.939289781554631 -0.4172041592557686 RDS(ph)IIGK ddPTM_A549_MK2206_60min_R1 2 RDSIIGK 7 1 Q14644-2;Q14644 Q14644-2 RASA3 Ras GTPase-activating protein 3 1 RDS(1)IIGK;RDS(1)IIGK 51.949 0.020291 6576400.0 1042.25 1170.72 1400.0 1073.3799999999999 1627.23 1465.22 1429.02 1603.8600000000001 2196.49 2227.0 2691.5 True False 1218.1563194339897 1230.304647450579 1598.5410516422287 1336.3581481858591 1387.8666225785469 1620.2686078656807 1688.654436465508 1831.2120666152512 1698.9885220737733 1723.9191532813272 2023.126268378962 0.6021158137648236 0.6081205442685322 0.79013409920433 0.6605411481590922 0.6860009897902124 0.8008736939409755 0.8346757505247308 0.9051397805647183 0.8397837290873074 0.8521065542105902 1.0 10.982370649580176 -4.361564949800901 0.10765857317923663 1.1339598025973388 1.3041881812091631e-14 0.720774432671512 0.06385948324719824 14.346626188715966 0.18268363730882806 0.33409663728153666 2.4220405457017633 4.349457085730309e-05 4.361564949800901 -1.1339598025973257 RDS(ph)IIGK ddPTM_A549_PD325901_60min_R1 2 RDSIIGK 7 1 Q14644-2;Q14644 Q14644-2 RASA3 Ras GTPase-activating protein 3 1 RDS(1)IIGK;RDS(1)IIGK 60.828 0.011916 11098700.0 2754.6000000000004 2957.6000000000004 3106.2 2504.5 3525.2 3020.3 3113.5 2964.8999999999996 2790.7 3491.1000000000004 3196.9 True False 3034.2449641706567 3206.8473316981017 3317.0054110979904 2659.1972768678083 3277.602113279791 2995.703678177274 3231.9859462725735 2905.762743580947 2673.416583920665 3270.671350205149 2803.701566818808 1.08222822288944 1.1437905409229125 1.1830807709187101 0.9484594609992818 1.1690267438123558 1.0684816506973385 1.152756764315581 1.036402296867117 0.9535310803260814 1.1665547392464397 1.0 11.45311707802487 -8.510504829946198 4.708208993735684 0.978432243722204 1.1057878358520798 0.0027115950915845843 0.08360015282395436 0.11965862393454375 7.008903510394817 0.009780166370699641 0.011501232858346658 3.0867053171253937e-09 8.510504829946198 0.1273555921298758 RDS(ph)IVAELDR ddPTM_A549_MK2206_60min_R1 4 RDSIVAELDR 10 1 M0QXB4;O14579-3;O14579 M0QXB4 COPE Coatomer subunit epsilon 1 RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR 70.332 0.0013245999999999998 7623200.0 204.376 210.23000000000002 225.39299999999997 128.91 325.95 155.85 267.829 205.13 424.67 88.76799999999999 341.425 True False 238.869672286535 220.92980903506842 257.35711660914046 160.49295578698974 278.0031867833541 172.3419435551427 316.4900624652701 234.20780568427818 328.48292305863873 68.71524714794653 256.639749649373 0.9307586709108161 0.8608557689793093 1.0027952293467692 0.6253628130726391 1.0832429004593729 0.6715325423696061 1.2332074937637911 0.9125936492856549 1.2799378253268228 0.2677498214591732 1.0 8.003600829340014 -7.773619992352112 24.998643204014957 1.1224744983157158 0.8679954582940496 0.0 0.3003969848167199 177.70723771246674 364713.3997871766 0.024482162265720753 0.03396118373621337 1.6841470451182812e-08 7.773619992352112 -0.2544790400216662 RDS(ph)IVAELDR ddPTM_A549_PD325901_60min_R1 2 RDSIVAELDR 10 1 M0QXB4;O14579-3;O14579 M0QXB4 COPE Coatomer subunit epsilon 1 RDS(1)IVAELDR;RDS(1)IVAELDR 71.558 0.0010737 3587800.0 168.93 219.835 158.74 165.9 147.91 0.0 0.0 0.0 248.411 0.0 111.75 True False 186.07964924030682 238.3612669609996 169.5130509811651 176.1472662137631 137.521311861799 0.0 0.0 0.0 237.97114954252223 0.0 98.00545844161589 1.8986661783859595 2.4321223608478593 1.7296286724901953 1.7973209759403155 1.4032005364652584 0.0 0.0 0.0 2.428141792574616 0.0 1.0 6.614790197659593 -11.488171574225127 2.492720197336369 0.991074332594715 1.5022353719357344 0.01378418118557112 0.9454210237010793 1.10963682386151 12.50478337466741 0.8763025400122669 0.14948700280871915 3.249588923808776e-12 11.488171574225127 0.5111610393410194 RDS(ph)IVAELDREMSR ddPTM_A549_MK2206_60min_R1 1 RDSIVAELDREMSR 14 2 M0QXB4;O14579-3;O14579 M0QXB4 COPE Coatomer subunit epsilon 1 RDS(0.97)IVAELDREMS(0.03)R 40.085 0.036118 955030.0 125.16 252.38 184.45 227.62 507.51 174.15 285.17 147.29 264.73 279.48 351.13 True False 146.28394813179008 265.22506399786215 210.60778355386356 283.3869102182499 432.8559512944316 192.5784374085859 336.9816976997306 168.16880855670712 204.7690776869414 216.34527389271008 263.93473030499905 0.5542428916525936 1.0048888363095376 0.7979540370094088 1.0737007209728413 1.6400113421762634 0.7296441706858553 1.2767614830769698 0.637160590280687 0.7758322576582221 0.8196923293978958 1.0 8.04403739243608 -11.482700722747198 2.464464922026012 1.0014113231346298 0.9203100992969652 0.0 0.3005519577654469 1.9676067297058628 21.654297497539993 0.24427396519136998 0.04177874785582733 3.29078324363873e-12 11.482700722747198 -0.0811012238376646 RDS(ph)LAK ddPTM_A549_PD325901_60min_R1 1 RDSLAK 6 1 P35251-2;P35251 P35251-2 RFC1 Replication factor C subunit 1 1 RDS(1)LAK 67.993 0.059118 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RDS(ph)LDK ddPTM_A549_MK2206_60min_R1 2 RDSLDK 6 1 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 RDS(1)LDK;RDS(1)LDK 60.43600000000001 0.026697000000000002 5268000.0 2868.1000000000004 2108.06 1985.4900000000002 1841.26 1021.19 605.4100000000001 558.0899999999999 780.6400000000001 839.47 4975.6 5134.4 True False 3352.1651616873373 2215.3512497477345 2267.062337589379 2292.368782657302 870.974303762213 669.4740843613669 659.487728966029 891.2981106097351 649.3313853581258 3851.608504295723 3859.3867777688806 0.8685745572319215 0.5740163858436685 0.5874151693342258 0.5939722848878404 0.22567686368706613 0.17346643985456964 0.17087889007778592 0.23094293522065606 0.168247294906655 0.9979845830643452 1.0 11.91415591895519 -10.88520143095248 1.1475496338925504 0.9982681495795086 0.37583591568496144 0.5137526178257541 0.22326739519769231 0.3472787140713915 0.8156503939625616 0.1699570597825054 0.04130754227579023 1.3025624943296802e-11 10.88520143095248 -0.6224322338945472 RDS(ph)LDK ddPTM_A549_PD325901_60min_R1 2 RDSLDK 6 1 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 RDS(1)LDK;RDS(1)LDK 98.58200000000001 0.014258000000000002 15593900.0 7684.5 6672.299999999999 5840.7 5578.2 6654.9 4636.2 4184.3 5107.299999999999 5691.9 7695.9 9366.3 True False 8464.624782970099 7234.598137438887 6237.085024982305 5922.752744988629 6187.482782158649 4598.444324327213 4343.535826236817 5005.430894900656 5452.689237115435 7209.979560609487 8214.30447786762 1.0304737066634109 0.8807316744748841 0.7592955729590161 0.7210291219356089 0.7532570528436121 0.5598093346450848 0.5287770666329586 0.6093554126690996 0.6638041299548856 0.8777346371851499 1.0 13.003922709038763 -5.4317799752197145 2.3282141309162454 0.7651496089713855 1.0498269877763178 0.29062210628122886 0.13585375365861893 0.5902385224874828 4.8047642475628605 0.025352128668410034 0.2903259258466438 3.7001559173986466e-06 5.4317799752197145 0.28467737880493227 RDS(ph)LDKSGLFPEWK ddPTM_A549_MK2206_60min_R1 1 RDSLDKSGLFPEWK 14 2 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 RDS(0.978)LDKS(0.022)GLFPEWK 94.01 1.1382e-05 7557100.0 392.94 618.06 548.93 459.53 1094.9 818.1 838.35 619.23 1055.7 934.92 859.47 True False 459.2586655393542 649.5166140522967 626.776528198549 572.1148706290852 933.8416604052602 904.6707989891704 990.6673432218289 707.0077488123412 816.5856356064817 723.7209226698602 646.0398788347263 0.7108828426624797 1.0053816108439644 0.9701824124682165 0.8855720666362253 1.445486093040645 1.4003327482212728 1.5334461163739819 1.0943716819580607 1.2639864230662847 1.1202418710981876 1.0 9.335479412312125 -6.724263824489957 24.934136750362892 1.1961695953572238 0.9065440132627598 0.49180355506032947 0.17303394177250056 156.31548443766894 104842.12782189512 0.028830249021519344 0.06001366808950505 1.8868447835420026e-07 6.724263824489957 -0.289625582094464 RDS(ph)LDKSGLFPEWK ddPTM_A549_PD325901_60min_R1 2 RDSLDKSGLFPEWK 14 2 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 RDS(1)LDKSGLFPEWK;RDS(0.728)LDKS(0.272)GLFPEWK 109.89 4.0282e-06 16585200.0 4132.32 3846.01 4213.8 4715.26 4385.06 5503.2 3917.72 4009.52 5948.18 5509.38 6336.400000000001 True False 4551.830084346797 4170.12676027327 4499.773807637857 5006.5109010675615 4077.068513235754 5458.383763780145 4066.8109784586422 3929.5469781924094 5698.198679953145 5161.516806563327 5557.062969749037 0.8191071631049671 0.7504192021890292 0.8097395750476932 0.9009275094274595 0.7336732614746453 0.9822425611323695 0.7318274060591227 0.7071265881966193 1.0253975366074504 0.9288210039477791 1.0 12.44010687291341 -8.77711490448491 24.991769886698048 1.0119933079823613 0.8071339784270828 0.4912216454645405 0.08041775417715376 109.75152211367586 174978.1858164722 0.012633022744004076 0.013469643119021988 1.670648540061558e-09 8.77711490448491 -0.20485932955527852 RDS(ph)LDSSTEASGSDVVLGGR ddPTM_A549_MK2206_60min_R1 2 RDSLDSSTEASGSDVVLGGR 20 1 Q9Y2I9 Q9Y2I9 TBC1D30 TBC1 domain family member 30 1 RDS(0.99)LDS(0.003)S(0.003)T(0.003)EASGSDVVLGGR;RDS(1)LDSSTEASGSDVVLGGR 113.6 4.1316e-12 3406600.0 672.88 474.03999999999996 379.08 327.36 909.08 691.29 490.32 644.56 743.85 598.84 692.62 True False 786.4456936634618 498.1666112114529 432.83924418323977 407.56321469574885 775.3555362509943 764.441848958836 579.4047971951182 735.9283538822132 575.3691626843629 463.5616280875573 520.6233386604636 1.5105847841684263 0.95686569198609 0.8313865553874561 0.7828370040889591 1.489283093312611 1.468320361752711 1.1129059228998384 1.4135523693112146 1.1051543792960905 0.8903973250224951 1.0 9.024096176535965 -4.27630810272584 16.40600131420176 1.112428487863079 1.1051274799538688 0.0 0.2682753822639392 0.0 0.0 0.034117875429078244 0.0 5.2928781655837684e-05 4.27630810272584 -0.007301007909210178 RDS(ph)LDSSTEASGSDVVLGGR ddPTM_A549_PD325901_60min_R1 2 RDSLDSSTEASGSDVVLGGR 20 1 Q9Y2I9 Q9Y2I9 TBC1D30 TBC1 domain family member 30 1 RDS(0.987)LDS(0.013)S(0.001)TEASGSDVVLGGR;RDS(0.999)LDSSTEASGSDVVLGGR 91.76700000000001 1.4052000000000001e-06 5027600.0 624.8299999999999 476.94 362.52 442.32 635.26 536.78 466.67999999999995 572.54 519.3299999999999 683.24 499.96000000000004 True False 688.2622816244655 517.1334076210757 387.1227872098525 469.6411018183947 590.6415291280265 532.4086416488417 484.4397627770945 561.1202405510592 497.5043661187229 640.1001097975319 438.4680895075642 1.5696975403556523 1.179409448477446 0.8828984285826212 1.0710952816334716 1.3470570453402109 1.2142471810132878 1.104846109374026 1.2797287966411501 1.1346421279538526 1.4598556317209244 1.0 8.776328040918221 -14.999999999991452 0.13539853287634906 0.32395760623379966 1.2604491954102381 0.0 0.2143869295249259 95.37643097774853 0.8748621231124216 17.157643913303225 0.4357428300651735 1.0000000000196822e-15 14.999999999991452 0.9364915891764385 RDS(ph)LEEGELR ddPTM_A549_MK2206_60min_R1 5 RDSLEEGELR 10 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RDS(1)LEEGELR;RDS(1)LEEGELR;RDS(1)LEEGELR;RDS(1)LEEGELR;RDS(1)LEEGELR 190.24 8.4652e-15 56117600.0 3132.82 2765.94 2681.59 2616.97 3719.4300000000003 3596.8199999999997 3287.1900000000005 3817.31 3968.1099999999997 3501.4900000000007 3550.96 True False 3661.5634259047174 2906.7145317150585 3061.8797847666306 3258.1277674802486 3172.306774099128 3977.433105024117 3884.4298729234406 4358.425382521577 3069.339420769572 2710.5009771095815 2669.1586304896746 1.371804352157586 1.0890002933927545 1.1471329391183127 1.220657225188045 1.1885043990499535 1.4901448941962776 1.455301243077792 1.632883610863546 1.1499276909617326 1.0154889058101138 1.0 11.382169333349202 -8.97835154156814 13.588388167868638 1.0660888086834017 1.3174962605737937 0.38265474791241716 0.15532838660511344 0.9190872615223793 575.7079339356321 0.030255772500933448 0.031206956959095793 1.051110703221149e-09 8.97835154156814 0.25140745189039193 RDS(ph)LEEGELR ddPTM_A549_PD325901_60min_R1 6 RDSLEEGELR 10 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RDS(1)LEEGELR;RDS(1)LEEGELR;RDS(1)LEEGELR;RDS(1)LEEGELR;RDS(1)LEEGELR;RDS(1)LEEGELR 197.06 1.1937999999999998e-19 89316500.0 5278.13 4587.86 5122.939999999999 5366.8730000000005 5864.82 4799.099999999999 3994.0 4495.485000000001 4996.2570000000005 4919.295999999999 5196.081 True False 5813.9618720460585 4974.49506329607 5470.613515140794 5698.372556157065 5452.895275730621 4760.017720736533 4145.993855600659 4405.81902503524 4786.281693241738 4608.6908110276945 4556.995977671317 1.275832127246482 1.091617172292985 1.2004867991865877 1.2504668830252088 1.1965986589518827 1.0445516616779993 0.9098085396422305 0.9668253047892024 1.0503151015919021 1.0113440594658578 1.0 12.153867381798573 -7.305165528264518 4.39019636339432 1.0103819070786604 1.2000532417366023 0.7720799159633916 0.05564137550689426 0.08815257108167017 3.8281202864346016 0.008659357383350535 0.014299121880745695 4.952613894575859e-08 7.305165528264518 0.18967133465794195 RDS(ph)LEEGELRDHR ddPTM_A549_MK2206_60min_R1 1 RDSLEEGELRDHR 13 2 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9 P21127 CDK11B Cyclin-dependent kinase 11B 1 RDS(1)LEEGELRDHR 45.013999999999996 0.013706 2024100.0 153.84 0.0 0.0 137.51 104.36 0.0 0.0 0.0 0.0 133.39 126.66 True False 179.80443097311104 0.0 0.0 171.1999561730585 89.00878224485605 0.0 0.0 0.0 0.0 103.25710635662159 95.20682636183516 1.888566585443792 0.0 0.0 1.7981899272895638 0.9348991626564325 0.0 0.0 0.0 0.0 1.0845557015438285 1.0 6.5729931138543325 -2.613877623347561 6.3427949158068735 0.5235204357978219 1.3362934634639652 0.0 0.7288596937443105 0.0 0.0 0.09386132416718977 0.0 0.002432889458547892 2.613877623347561 0.8127730276661432 RDS(ph)LEEGELRDHR ddPTM_A549_PD325901_60min_R1 1 RDSLEEGELRDHR 13 2 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A087X1I0;A0A087WYI9 P21127 CDK11B Cyclin-dependent kinase 11B 1 RDS(1)LEEGELRDHR 43.791000000000004 0.01737 2822600.0 139.2 0.0 0.0 130.73 234.98 0.0 107.55 111.6 0.0 92.801 144.68 True False 153.3314815263761 0.0 0.0 138.8048951906284 218.47581543699224 0.0 111.64287410361817 109.37405045149366 0.0 86.94152902248227 126.88527720208491 1.2084261066961413 0.0 0.0 1.0939401185967352 1.7218373971712644 0.0 0.8798725633535024 0.8619916578445752 0.0 0.685197927920464 1.0 6.987380869357325 -5.192291691226975 20.65536376870794 0.5817277170187374 1.2084881734096007 0.08202446801883678 0.5451385391520075 26898.14155868696 8031502.691452159 0.07933657867494294 323.31998468915737 6.422562049782532e-06 5.192291691226975 0.6267604563908633 RDS(ph)LGAYASQDANEQGQDLGK ddPTM_A549_MK2206_60min_R1 2 RDSLGAYASQDANEQGQDLGK 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(1)LGAYASQDANEQGQDLGK;RDS(0.958)LGAYAS(0.042)QDANEQGQDLGK 283.84 5.866399999999998e-128 111650000.0 16790.1 19045.3 16677.6 14728.7 24110.0 21934.2 20189.8 26793.0 24127.0 22945.0 22665.0 True False 19623.858401466663 20014.624420946526 19042.734459191735 18337.232161196458 20563.450938323873 24255.262485256404 23858.025318995755 30590.98980012121 18662.27302290195 17761.70856400542 17036.654977822473 1.1518609977728662 1.1747977784958747 1.1177507840582956 1.0763399379201501 1.2070122312796978 1.4237103772325483 1.400393759811009 1.7955983636425779 1.095418851129851 1.0425584474843677 1.0 14.056354480334093 -8.97736618883912 24.999980844802316 1.0420962486246645 1.291669182295165 0.2533051935079397 0.1911589495927833 168.27961451308988 185873.93135308227 0.03615786035909261 0.03719747369769044 1.0534982321384903e-09 8.97736618883912 0.24957293367050037 RDS(ph)LGAYASQDANEQGQDLGK ddPTM_A549_PD325901_60min_R1 2 RDSLGAYASQDANEQGQDLGK 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(1)LGAYASQDANEQGQDLGK;RDS(0.999)LGAYAS(0.001)QDANEQGQDLGK 271.38 1.4257999999999998e-112 144958000.0 20490.2 19686.7 21994.6 19723.3 22524.5 19872.3 21862.5 20760.3 20878.7 19498.7 22912.3 True False 22570.350019912017 21345.767299479667 23487.285820274243 20941.563446135697 20942.45682530655 19710.466577440075 22694.48940111903 20346.219530359722 20001.24084663505 18267.54875433105 20094.232353036554 1.1232252928786943 1.0622832922629157 1.1688570833473488 1.0421678757472463 1.0422123352297068 0.9809016951305191 1.1294031542185057 1.012540273890338 0.9953722289676096 0.9090941337488085 1.0 14.294493843653187 -6.636098912435148 0.37892957701104796 0.9941806392357513 1.1455693261011837 0.46110583156671214 0.052817021939249906 1.5672667833839762 0.3014042346322893 0.01425584988071611 0.09321601089980405 2.3115382674419792e-07 6.636098912435148 0.1513886868654324 RDS(ph)LGAYASQDANEQGQDLGKR ddPTM_A549_MK2206_60min_R1 3 RDSLGAYASQDANEQGQDLGKR 22 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.959)LGAY(0.002)AS(0.039)QDANEQGQDLGKR;RDS(0.994)LGAYAS(0.006)QDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR 120.18 1.2792e-15 56979500.0 16896.0 17698.5 17749.3 14856.899999999998 23522.800000000003 18600.2 18576.0 17660.399999999998 27369.8 26573.9 27929.0 True False 19747.631732460257 18599.278053594433 20266.41763422387 18496.84116695158 20062.62728046475 20568.460818186508 21951.0187483613 20163.81578270671 21170.584000589468 20570.837533624905 20993.458498813303 0.9406564303626547 0.885955882621522 0.9653682186462736 0.8810764156843024 0.9556608922535955 0.9797557091104918 1.0456123153601455 0.9604808937911069 1.0084371758843917 0.9798689213017336 1.0 14.357652237845548 -7.177838018781272 2.626408126392804 1.0029658075015244 0.9194329307142836 0.5866355982047151 0.030048370672745482 0.12149958621097817 1.638095833835575 0.0038876349815905984 0.00710622957044493 6.639906765043793e-08 7.177838018781272 -0.08353287678724086 RDS(ph)LGAYASQDANEQGQDLGKR ddPTM_A549_PD325901_60min_R1 4 RDSLGAYASQDANEQGQDLGKR 22 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(1)LGAYASQDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR 236.65 2.8036999999999995e-98 320521000.0 21431.2 22733.9 19749.699999999997 21718.0 24616.1 19584.6 22447.6 22554.999999999996 23387.199999999997 24167.999999999996 26827.6 True False 23606.879647184407 24649.765537629 21090.033406593913 23059.471534843316 22887.150056934814 19425.10951085343 23301.855701798042 22105.12283094479 22404.317315178774 22642.028355463302 23527.97527416818 1.0033536405957915 1.047678997040279 0.8963811446091186 0.9800873753960783 0.9727632654418444 0.8256175588632411 0.9903893314348048 0.9395250791178122 0.9522416210534235 0.9623449570827467 1.0 14.522089552742314 -5.733934629428537 24.9999415698279 0.9610503679734211 1.0255163470726198 0.23586853306778488 0.04947597773537709 268.76912839811064 244288.82964050063 0.006830504501995351 0.026441494955623358 1.8452931542071018e-06 5.733934629428537 0.06446597909919871 RDS(ph)LGTYSSR ddPTM_A549_MK2206_60min_R1 4 RDSLGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(1)LGTYSSR;RDS(0.999)LGT(0.001)YSSR;RDS(0.999)LGT(0.001)YSSR;RDS(1)LGTYSSR 184.71 1.9915e-14 331166000.0 15067.899999999998 16332.0 14621.3 15752.9 21923.0 18715.3 17085.800000000003 17230.6 20887.6 20411.7 21431.199999999997 True False 17610.993145214117 17163.229040387832 16694.82019884037 19612.361207174552 18698.155741222497 20695.7406237893 20190.068697822542 19673.09031649941 16156.59195064314 15800.682793458685 16109.241568970163 1.0932229844474273 1.0654275042623902 1.0363504779143766 1.2174602462323332 1.1607098733461876 1.2847122898481895 1.2533221139791537 1.2212300766780964 1.002939330288782 0.9808458533450869 1.0 13.975600952399482 -8.773593392279977 24.934226335596048 1.00138799489771 1.1671763044195178 0.5172068718141929 0.07391121122284307 137.469995365638 282021.8893233729 0.01407743981113613 0.01504140775172882 1.684250200481077e-09 8.773593392279977 0.1657883095218078 RDS(ph)LGTYSSR ddPTM_A549_PD325901_60min_R1 4 RDSLGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(1)LGTYSSR;RDS(1)LGTYSSR;RDS(1)LGTYSSR;RDS(0.978)LGT(0.022)YSSR 194.83 1.4415e-19 351990000.0 22280.3 22375.0 21132.5 20342.3 25092.5 22207.4 21220.199999999997 18575.9 22202.0 21654.7 24068.5 True False 24542.17965411005 24260.619775069328 22566.678530045807 21598.797670284697 23330.089364425614 22026.55029724001 22027.746323138992 18205.389101988356 21268.92714953476 20287.41854638579 21108.227082792226 1.1626831357199694 1.1493442665702125 1.0690939812961617 1.0232407291037906 1.1052604879092232 1.043505464047069 1.0435621256460887 0.8624783611897794 1.0076131484710784 0.9611142833935318 1.0 14.36551778882302 -5.5246584139729285 0.48008069802188036 0.9948680721377283 1.2630012111962328 0.5900290618116382 0.05208577775339343 1.9843913325847278 0.35372900833011656 0.010647829791933088 0.28498383901250274 2.9877316382449183e-06 5.5246584139729285 0.26813313905850444 RDS(ph)LQKPGLEAPPR ddPTM_A549_MK2206_60min_R1 2 RDSLQKPGLEAPPR 14 2 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 RDS(1)LQKPGLEAPPR;RDS(1)LQKPGLEAPPR 172.66 2.4658000000000004e-23 23025000.0 3469.5 4085.6 3946.3999999999996 3456.8 5358.7 4184.1 3358.9 3721.3999999999996 5591.2 5325.8 5506.9 True False 4055.0667788690134 4293.5395889914635 4506.058861572064 4303.716155181649 4570.442328626967 4626.858684819203 3969.168651694166 4248.919846309524 4324.802127311703 4122.6980810712585 4139.384747291885 0.9796303137856333 1.0372410034608237 1.0885817909340438 1.039699476594263 1.1041356645132088 1.117764829144292 0.9588788899826043 1.0264616859037565 1.0447934636037695 0.9959688052115611 1.0 12.015200634997083 -10.633064175839046 0.38154338985849473 0.9867828193347863 1.0512861445087112 0.1378185553111677 0.04540201065340597 4.007172376323125 0.7731914618936613 0.10491051661549519 0.015831746108290128 2.3277472602677856e-11 10.633064175839046 0.06450332517392487 RDS(ph)LQKPGLEAPPR ddPTM_A549_PD325901_60min_R1 4 RDSLQKPGLEAPPR 14 2 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 RDS(1)LQKPGLEAPPR;RDS(1)LQKPGLEAPPR;RDS(1)LQKPGLEAPPR;RDS(1)LQKPGLEAPPR 134.29 1.2337999999999998e-09 64222200.0 9056.3 9846.7 9134.599999999999 9907.9 12039.6 10834.4 9294.3 10216.699999999999 10605.5 10894.9 12763.1 True False 9975.688909104305 10676.515965996652 9754.52888681208 10519.888480526486 11193.980030365185 10746.168238533875 9647.999672536116 10012.919903653894 10159.787716619707 10206.994154664731 11193.319611956931 0.8912180885506094 0.9538292781876595 0.871459872939936 0.9398363349947524 1.000059001121307 0.9600519426832591 0.8619426592831252 0.8945442684364958 0.9076652922308066 0.9118826682802315 1.0 13.450350340570733 -10.728896740981641 0.9949432331485719 0.9997747383789877 0.9210039963605265 0.0 0.04674905589753666 0.5017134400671708 0.8865618935828401 0.027556681716128687 0.007203721005559839 1.8668234990235437e-11 10.728896740981641 -0.07877074201846113 RDS(ph)LSGK ddPTM_A549_MK2206_60min_R1 2 RDSLSGK 7 1 Q92845-2;Q92845-3;Q92845 Q92845-2 KIFAP3 Kinesin-associated protein 3 1 RDS(1)LSGK;RDS(1)LSGK 73.985 0.0078592 15889600.0 4240.9 3545.8999999999996 3190.8999999999996 2668.0 4269.1 3149.8999999999996 3411.7 4186.0 4535.9 6529.0 7271.1 True False 4956.660239949731 3726.371164236547 3643.417601203705 3321.660119771071 3641.121045242575 3483.2203272656034 4031.5617282398916 4779.378319087349 3508.5258923438873 5054.09436541257 5465.485197848881 0.9069021432718516 0.681800614097936 0.6666229015930168 0.6077521024260423 0.6662027090798189 0.6373121875138437 0.7376402244811939 0.8744655133213842 0.6419422549574887 0.9247293117547501 1.0 12.416133861338523 -10.910567935774319 0.7845772852146877 1.0337436830640445 0.703030460923779 0.5041504130874646 0.09392358495621538 0.49002617857620134 0.44014521846661514 0.10810982205540992 0.017159453384756017 1.228660974687656e-11 10.910567935774319 -0.33071322214026555 RDS(ph)LTGSSDLYK ddPTM_A549_MK2206_60min_R1 3 RDSLTGSSDLYK 12 1 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 RDS(1)LTGSSDLYK;RDS(1)LTGSSDLYK;RDS(0.374)LT(0.06)GS(0.196)S(0.37)DLYK 170.47 4.882299999999999e-16 210381000.0 18457.5 22305.1 21098.600000000002 16574.9 27344.3 21703.7 18911.7 21847.4 29783.9 30644.2 29699.8 True False 21572.67475745058 23440.33431721496 24090.698737270504 20635.751244075527 23321.989692775165 24000.37112824994 22347.711092990114 24944.335854856414 23037.894205115004 23721.6539366788 22324.519987219574 0.9663219979556374 1.0499815597663096 1.079113851095658 0.9243536369825269 1.044680454770209 1.075067734580173 1.0010388176670233 1.1173514982242234 1.0319547393764268 1.06258293348565 1.0 14.446341534985404 RDS(ph)LTGSSDLYK ddPTM_A549_PD325901_60min_R1 5 RDSLTGSSDLYK 12 1 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 RDS(1)LTGSSDLYK;RDS(0.997)LT(0.002)GSSDLYK;RDS(0.999)LT(0.001)GSSDLYK;RDS(0.995)LT(0.003)GS(0.001)S(0.001)DLYK;RDS(0.999)LT(0.001)GSSDLYK 176.26 2.1698e-16 308660000.0 30868.5 33199.3 32677.0 30591.8 36523.5 29217.2 30493.3 31742.899999999998 34337.0 35480.5 37309.6 True False 34002.24739581135 35997.12152395347 34894.65772276385 32481.386006981284 33958.21535923476 28979.26481013178 31653.73921807403 31109.762957676696 32893.93530013398 33240.25517485998 32720.755725040795 1.039164488789293 1.1001311163606564 1.0664380131067508 0.9926844685351712 1.037818797481103 0.8856538966780129 0.9673902242376942 0.9507654168839619 1.0052926520569527 1.015876755848326 1.0 14.997918448983691 -6.255070690105388 4.0905392852155815 0.9897402971703507 1.0732038434194298 0.467423876938994 0.04054869507847273 0.15205888873690787 6.127307765334107 0.005744514685360206 0.01517148172881887 5.55813780107643e-07 6.255070690105388 0.08346354624907903 RDS(ph)LTGSSDLYKR ddPTM_A549_MK2206_60min_R1 4 RDSLTGSSDLYKR 13 2 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 RDS(0.956)LT(0.035)GS(0.007)S(0.002)DLYKR;RDS(1)LTGSSDLYKR;RDS(1)LTGSSDLYKR;RDS(0.999)LT(0.001)GSSDLYKR 151.44 1.1199000000000001e-13 233117000.0 23039.199999999997 24187.4 23446.5 19797.4 31536.9 23734.9 22112.1 21527.0 41608.2 37974.7 39723.8 True False 26927.653705640256 25418.435347261635 26771.566262378237 24647.76388873905 26897.863786678823 26246.51136404848 26129.582346341525 24578.51817367259 32184.009134642052 29396.18889542543 29859.28413889364 0.9018184622371859 0.8512741038607984 0.8965910280315981 0.8254639921736687 0.9008207853061897 0.8790067183781111 0.8750907163345575 0.823144924015693 1.0778560190838704 0.9844907452799581 1.0 14.865891957558807 -8.762553827132207 24.99999499601047 1.0367653477839207 0.8695959794160353 0.7907088705129851 0.034476062226522934 8.26365660458683 185374.61025504285 0.006103166719818231 0.006677257259065862 1.7276118443443351e-09 8.762553827132207 -0.16716936836788543 RDS(ph)LTGSSDLYKR ddPTM_A549_PD325901_60min_R1 4 RDSLTGSSDLYKR 13 2 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 RDS(1)LTGSSDLYKR;RDS(0.995)LT(0.005)GSSDLYKR;RDS(1)LTGSSDLYKR;RDS(1)LTGSSDLYKR 169.02 2.7027e-22 383410000.0 22456.1 23349.0 22196.1 22135.2 26017.9 29143.4 27624.3 26897.9 29622.1 30803.8 32530.199999999997 True False 24735.826740692915 25316.70217332263 23702.460821992165 23502.44103131336 24190.492460882277 28906.065812863482 28675.557853096998 26361.40028350564 28377.186150627567 28858.8428109906 28529.191625927975 0.8670356687643556 0.8873964080466352 0.8308143158339906 0.8238032587629931 0.8479207114616388 1.013210124979251 1.0051304021890337 0.9240149748774447 0.994671931918244 1.0115548729660826 1.0 14.800151248313197 -7.257143449680725 24.993724246404042 0.9929230561415754 0.8507180535283049 0.8635379693099186 0.027714702969566022 97.06903973687008 564747.3169514177 0.004143446285662271 0.007020840263859854 5.5316736503688e-08 7.257143449680725 -0.14220500261327051 RDS(ph)LTSPEDELGAEVGDEAGDK ddPTM_A549_MK2206_60min_R1 1 RDSLTSPEDELGAEVGDEAGDK 22 1 A8MVW0 A8MVW0 FAM171A2 Protein FAM171A2 1 RDS(0.333)LT(0.333)S(0.333)PEDELGAEVGDEAGDK 53.201 0.0034051000000000003 1614000.0 205.79 506.52 313.96 361.7 694.69 484.56 386.32 463.44 803.89 616.16 510.47 True False 240.52232091755414 532.2997044781564 358.4842489811385 450.31651623733023 592.5020212502783 535.8358175751043 456.50934339292326 529.1340392254758 621.8101985485415 476.9690280582951 383.7062107447179 0.626839790919035 1.3872585055244224 0.9342675175504007 1.1735971522674378 1.544155410203859 1.3964741840772528 1.189736654267089 1.379008273539549 1.6205372264934113 1.2430578778815378 1.0 8.58385830665207 -5.011984851386753 2.4350206085386543 1.2957818370317273 6.724169351491469e-31 0.4565717587956204 0.20308934845793422 1.7359383204444372 5.794037229641251 0.035456323317758415 6.2565430510040745 9.727811547364776e-06 5.011984851386753 -1.2957818370317273 RDS(ph)LTSPEDELGAEVGDEAGDK ddPTM_A549_PD325901_60min_R1 1 RDSLTSPEDELGAEVGDEAGDK 22 1 A8MVW0 A8MVW0 FAM171A2 Protein FAM171A2 1 RDS(0.333)LT(0.333)S(0.333)PEDELGAEVGDEAGDK 53.778999999999996 0.0031673 1989800.0 309.31 275.21 258.63 313.8 326.06 386.01 256.54 163.92 264.36 296.25 191.94 True False 340.710923498013 298.40291254957884 276.1821870685318 333.182713308492 303.1586704459344 382.86646254120734 266.3027700840745 160.65048700724762 253.24986853666385 277.5447244416588 168.3325968079082 2.024034144063098 1.7726983258631699 1.6406934385007768 1.979311907655661 1.8009504765846522 2.2744641846053932 1.5820035758609747 0.9543635044766345 1.504461247191823 1.6487877553411558 1.0 7.3951707645383795 -8.79737618723363 0.4068067907923661 1.0379813146481893 1.938783638939717 0.32405950829200847 0.31437569120815545 0.5467951829267432 0.23695019141544352 0.15802116997253743 0.14282300663230926 1.5944973902735997e-09 8.79737618723363 0.9008023242915277 RDS(ph)PLQGSGQQNSQAGQR ddPTM_A549_MK2206_60min_R1 2 RDSPLQGSGQQNSQAGQR 18 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR 180.68 2.3731e-32 75398000.0 2023.21 2258.42 1474.3899999999999 1946.33 2844.1000000000004 1951.26 1727.16 2104.3199999999997 2867.5 3552.5 3260.2 True False 2364.6783852646126 2373.363931508249 1683.4806722362762 2423.180937374074 2425.7366575564897 2157.74103805844 2040.9626152788385 2402.6138042097214 2218.0158284565573 2749.987782681596 2450.602363057438 0.9649376091820852 0.9684818586999058 0.6869660690834885 0.9888103324730526 0.9898532271592502 0.8804941473109427 0.8328412010231142 0.9804176476889359 0.9050900553647147 1.12216809390922 1.0 11.258920694862514 -10.934647177537322 0.5015302998691398 1.026600781129289 0.9056362902637987 0.235034987042415 0.09321734022317388 2.9747618960176307 0.8804877327855944 0.1808614670484783 0.020013122190069794 1.162392562423335e-11 10.934647177537322 -0.12096449086549033 RDS(ph)PLQGSGQQNSQAGQR ddPTM_A549_PD325901_60min_R1 2 RDSPLQGSGQQNSQAGQR 18 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR 205.72 1.2502999999999999e-49 110838000.0 2533.2 2933.2 2912.0 2661.3999999999996 3188.8999999999996 1994.5700000000002 3093.8 3037.2 2825.8 2691.4 3022.8 True False 2790.3685991567218 3180.3910580662964 3109.6258312785235 2825.788633522056 2964.922665107774 1978.3268832175759 3211.5362519923196 2976.620663362691 2707.041452984206 2521.464544682802 2651.014763107976 1.0525662240693716 1.1996881731196753 1.1729945357350198 1.0659271584776768 1.1184104692166184 0.7462526843487814 1.2114365776776 1.1228231184472863 1.0211340542708054 0.9511318381821109 1.0 11.372328989044309 -6.727451515717342 2.4176861248509818 1.018891611702103 1.141385001777244 0.166317292969562 0.11616891684724603 0.3666381767559555 4.367309085379823 0.015975089841565933 0.03591866389595498 1.873046176697237e-07 6.727451515717342 0.12249339007514104 RDS(ph)PPPPAR ddPTM_A549_MK2206_60min_R1 11 RDSPPPPAR 9 1 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR 162.0 5.2891e-06 2065800200.0 18348.32 19501.479999999996 16773.329999999998 14810.760000000002 23241.72 18464.47 15561.52 17092.12 25229.25 27782.689999999995 28803.51 True False 21445.067842645298 20494.022034444206 19152.04041267296 18439.39686488028 19822.893776120323 20418.36795967678 18388.846752422454 19514.980352422186 19514.86515783352 21506.56103308379 21650.803530565143 0.9904975495422421 0.9465709670087823 0.884587973173162 0.8516726337130529 0.9155731217151225 0.9430766821587709 0.849337842194278 0.9013513205120657 0.9013459999433162 0.9933377762503032 1.0 14.402132948522214 -10.621885350819943 0.8529947553796616 1.0012731685531095 0.9071763996150203 0.419818713493756 0.039324207899871545 0.4891047344438638 0.6219578397734233 0.029107655896689705 0.007493396810652456 2.3884417232140985e-11 10.621885350819943 -0.09409676893808927 RDS(ph)PPPPAR ddPTM_A549_PD325901_60min_R1 13 RDSPPPPAR 9 1 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR 171.74 1.275e-07 2532114600.0 26062.340000000004 25165.749999999993 23960.579999999998 24443.87 27802.01 24786.779999999995 22673.639999999996 25094.410000000003 26769.39 30048.24 30943.579999999998 True False 28708.169570719343 27286.5560717073 25586.68904547238 25953.712333843363 25849.292729327673 24584.924681710716 23536.497777691886 24593.88230636618 25644.36563136131 28150.988998335288 27137.71582751514 1.0578697836319704 1.0054846268248283 0.9428460821131392 0.9563705545007105 0.9525227876076023 0.9059319818208086 0.8672984096114695 0.9062620620940489 0.944971411534949 1.0373381893030504 1.0 14.728011674256202 -5.4947496687509005 2.6721999422783917 0.95316836902893 1.0588005028218128 0.37387542976429555 0.044118910801666265 0.28522729422346554 3.5128231865324295 0.006411708923236038 0.05224439991646484 3.2007395131449466e-06 5.4947496687509005 0.10563213379288283 RDS(ph)PTYDPYK ddPTM_A549_MK2206_60min_R1 4 RDSPTYDPYK 10 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.837)PT(0.148)Y(0.015)DPYK;RDS(0.991)PT(0.009)YDPYK;RDS(0.94)PT(0.055)Y(0.005)DPYK;RDS(0.813)PT(0.187)YDPYK 96.734 0.00022174 50558500.0 7986.68 8075.799999999999 6912.620000000001 6689.22 10414.3 9053.6 7256.91 8591.0 11684.8 11701.099999999999 12968.5 True False 9334.636328421258 8486.823725469274 7892.933460287931 8328.079200290496 8882.37026573979 10011.645942706711 8575.39661203546 9808.80055883407 9038.211456791349 9057.813383233117 9748.063537608235 0.9575887859581581 0.8706163734701696 0.8096924512070347 0.8543316493743184 0.9111933084423811 1.027039463179694 0.8797025767170472 1.0062306755584336 0.9271801955251664 0.9291910488978535 1.0 13.250899939200318 -7.013031167666457 6.5643386728514646 0.9651095834677176 0.8697750885205214 0.3997647947720412 0.050754909164705105 0.11059848798949272 22.10618122062097 0.007331439038603407 0.013281171353925116 9.704403199282247e-08 7.013031167666457 -0.09533449494719615 RDS(ph)PTYDPYK ddPTM_A549_PD325901_60min_R1 2 RDSPTYDPYK 10 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.919)PT(0.081)YDPYK;RDS(0.999)PT(0.001)YDPYK 116.51 3.3604e-05 66102000.0 7675.200000000001 7285.2 8055.0 8386.2 8602.2 7607.5 8343.5 7147.4 7745.5 8367.3 8822.6 True False 8454.380653816397 7899.149371411626 8601.660738649893 8904.19652755793 7998.011147978951 7545.54704225859 8661.01645823839 7004.839499973171 7419.9835707018065 7838.9872500276515 7737.476131069354 1.0926535359338114 1.0208948289601933 1.1116881775066756 1.1507882385321595 1.033671834652056 0.9751948716145199 1.1193593765621606 0.9053132289281868 0.9589669092363754 1.0131194096419485 1.0 12.91764733850227 -7.543911372854109 1.0877351022803827 0.9779759696569787 1.0862156270710306 0.3665071975012302 0.05769913960694169 0.3585931420244708 0.8506462435270757 0.009715989156196422 0.01823892949404231 2.858173755798512e-08 7.543911372854109 0.10823965741405184 RDS(ph)PTYDPYKR ddPTM_A549_MK2206_60min_R1 2 RDSPTYDPYKR 11 2 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.951)PT(0.049)YDPYKR;RDS(0.994)PT(0.005)Y(0.001)DPYKR 114.88 4.5164e-06 128159000.0 10434.6 11430.400000000001 10601.9 9929.1 14765.3 12069.3 9201.7 11733.2 16627.6 15042.0 16122.2 True False 12195.705378523307 12012.158536814186 12105.40883957553 12361.729945734238 12593.34392947463 13346.465315047055 10873.529781265952 13396.417031417994 12861.475148821002 11644.001752877291 12118.612789916146 1.0063615027514792 0.9912156403585615 0.9989104404464839 1.0200614674330044 1.0391737196152935 1.1013195607794815 0.8972586194282713 1.1054414613003483 1.0612992899255755 0.9608361909678493 1.0 13.564936943405753 -6.385826922448165 3.3374294975449157 1.031432052331161 0.9979008249254742 0.023747628190238013 0.056743308916488724 0.5578089202797816 11.519598009403605 0.0073045606554955084 0.01833789892026477 4.113136075265715e-07 6.385826922448165 -0.033531227405686925 RDS(ph)PTYDPYKR ddPTM_A549_PD325901_60min_R1 3 RDSPTYDPYKR 11 2 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.821)PT(0.179)YDPYKR;RDS(0.867)PT(0.133)YDPYKR;RDS(0.93)PT(0.069)YDPYKR 110.44 1.7165e-05 285499000.0 21568.699999999997 21148.5 21123.4 20692.4 24057.6 21742.8 23259.4 21758.0 22430.800000000003 25958.9 25989.1 True False 23758.338545962255 22930.758315667194 22556.96094932307 21970.522552149912 22367.877170214422 21565.733845602357 24144.54919503206 21324.019621179206 21488.1114812082 24319.850623826405 22792.605458478723 1.0423704560342084 1.006061301655054 0.989661361462825 0.9639320345439928 0.9813655227333256 0.9461723840606394 1.059315015083123 0.9355674435739767 0.9427667898851266 1.0670061686510506 1.0 14.476278230312223 -5.389776335089615 1.3922402064769734 0.9741071354318941 1.0604000517974599 0.06904075456342762 0.04268292292426945 1.014016359296043 2.052069301760397 0.004842712326475646 0.11376267957695797 4.07590135732404e-06 5.389776335089615 0.0862929163655658 RDS(ph)QDGSSYR ddPTM_A549_MK2206_60min_R1 5 RDSQDGSSYR 10 1 C9J9W2;Q14847;Q14847-2;Q14847-3;J3KSN1 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 RDS(1)QDGSSYR;RDS(0.802)QDGS(0.117)S(0.076)Y(0.004)R;RDS(1)QDGSSYR;RDS(0.459)QDGS(0.352)S(0.19)YR;RDS(0.852)QDGS(0.071)S(0.071)Y(0.006)R 160.48 3.9472e-09 496571900.0 4795.42 4243.99 3877.5200000000004 3633.2899999999995 5216.03 4754.72 3785.08 5237.78 5777.310000000001 5982.55 5843.63 True False 5604.769659237365 4459.990963453072 4427.410641831267 4523.446213104584 4448.75889663316 5257.8613144723 4472.780041130892 5980.251355028511 4468.758509468302 4631.087799938575 4392.495395016667 1.275987600486966 1.015366110232689 1.0079488408466428 1.029812397353104 1.0128090063976671 1.197010091447654 1.0182776847541624 1.3614701478829483 1.017362138737392 1.054318191247871 1.0 12.100825058410798 -8.961443164972218 24.99995344559427 1.0076592929368298 1.106753141873416 0.1042368712572086 0.11464976487907777 224.73808657731607 145719.15666571684 0.018916237626660108 0.020099930085190388 1.0928406351395701e-09 8.961443164972218 0.09909384893658624 RDS(ph)QDGSSYR ddPTM_A549_PD325901_60min_R1 5 RDSQDGSSYR 10 1 C9J9W2;Q14847;Q14847-2;Q14847-3;J3KSN1 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 RDS(1)QDGSSYR;RDS(0.996)QDGS(0.002)S(0.002)YR;RDS(1)QDGSSYR;RDS(0.914)QDGS(0.041)S(0.041)Y(0.003)R;RDS(0.964)QDGS(0.018)S(0.018)Y(0.001)R 158.11 5.2549e-09 586161100.0 4330.69 4160.38 3465.23 3766.9700000000007 4110.38 3469.47 3887.5700000000006 3578.38 3940.3 4510.7 4994.0199999999995 True False 4770.338460714521 4510.989823454877 3700.401345920769 3999.64718149041 3821.681088841194 3441.2157866191137 4035.51360370993 3507.006403715194 3774.702893762355 4225.89363219912 4379.787199701102 1.0891712869155086 1.0299563923477217 0.8448815381197751 0.9132058246490528 0.8725723224868105 0.7857038777714952 0.9213949033837383 0.8007252964149787 0.8618461860475686 0.9648627751794688 1.0 12.096645060106336 -5.611748752879753 5.123237611104613 0.9038876139067354 1.0757501634231401 0.5184984768023713 0.0636627317276342 0.14131092187549316 6.011489029755091 0.010494780794905966 0.04365385093668528 2.444844529908055e-06 5.611748752879753 0.17186254951640467 RDS(ph)QGTYSSR ddPTM_A549_MK2206_60min_R1 2 RDSQGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.817)QGT(0.15)Y(0.009)S(0.021)S(0.003)R;RDS(1)QGTYSSR 120.6 2.0896999999999997e-05 16904000.0 1118.75 1330.01 1462.0300000000002 955.31 1678.98 1294.41 1383.0900000000001 1259.58 1597.92 1956.16 1627.05 True False 1307.56764918856 1397.7018280679792 1669.3678383803492 1189.360992885496 1432.0042661313576 1431.3836070401821 1634.379549993058 1438.1293223019707 1235.9936713538984 1514.262097387876 1223.0085807044356 1.0691402086773745 1.14283893843404 1.3649682142203916 0.9724878562997824 1.1708865242029156 1.1703790387273698 1.336359838989583 1.1758947116083425 1.010617334051723 1.2381451130258485 1.0 10.25621881060123 -8.763727083703149 7.037639410767387 1.0047873491878383 1.1791171897074402 0.0015279520103960165 0.12431639594541588 0.10178047394003177 26.7375182536951 0.017007092563711086 0.018617909095263147 1.72295095963392e-09 8.763727083703149 0.17432984051960188 RDS(ph)QGTYSSR ddPTM_A549_PD325901_60min_R1 1 RDSQGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.944)QGT(0.025)YS(0.025)S(0.004)R 62.408 0.0056626 5380400.0 427.18 361.11 378.2 376.91 554.82 629.97 393.17 457.23 317.84 387.47 420.45 True False 470.54699912670475 391.54200701565526 403.86692630135235 400.19087467528317 515.8513572250916 624.8397331858879 408.1322995008791 448.1101889600042 304.4822901183735 363.00507807395616 368.7373154521465 1.2761035550462774 1.0618453587631769 1.0952700184578006 1.0853007219640036 1.3989670575991302 1.6945389224296652 1.106837530127447 1.2152558750679479 0.8257430896165653 0.9844544147338018 1.0 8.526449611342562 -8.715540994134363 7.955441332783614 0.9178020170192521 1.2422244853832887 0.3674871366806396 0.1777911269917801 0.18766164725522155 28.35142916857789 0.03240268744612994 0.03662940504731479 1.925125319142684e-09 8.715540994134363 0.32442246836403654 RDS(ph)RDVDEEKELLDFVPK ddPTM_A549_MK2206_60min_R1 1 RDSRDVDEEKELLDFVPK 18 3 H0YBS0;P16157-2;P16157-12;P16157-21;P16157;P16157-3;P16157-16;P16157-5;P16157-8;P16157-15;P16157-10;P16157-13;P16157-4;P16157-7;P16157-6;P16157-9;P16157-11;P16157-14 H0YBS0 ANK1 Ankyrin-1 1 RDS(1)RDVDEEKELLDFVPK 61.222 0.00092141 1656900.0 443.43 433.74 405.4 530.2 598.83 583.35 588.91 456.81 826.5 728.56 586.12 True False 518.2701431773703 455.8155133466703 462.89181595411384 660.0990238015829 510.7429002653041 645.0797098036095 695.9073240254872 521.5642164219522 639.2990696492919 563.9777899931046 440.57022791093334 1.1763621560060227 1.0346035307651769 1.0506652211817025 1.4982833200772476 1.1592769277377433 1.4641926960484952 1.579560487610101 1.1838389963277156 1.4510718817308146 1.2801087188013975 1.0 8.783228196169649 -6.150528654942906 22.183727455724895 1.2708933687262562 1.0819381297667519 0.23704797829139657 0.17121363913603804 17.026920840022957 3384.387397391932 0.029554801198390157 0.07819493975380129 7.070845453896339e-07 6.150528654942906 -0.1889552389595044 RDS(ph)RDVDEEKELLDFVPK ddPTM_A549_PD325901_60min_R1 2 RDSRDVDEEKELLDFVPK 18 3 H0YBS0;P16157-2;P16157-12;P16157-21;P16157;P16157-3;P16157-16;P16157-5;P16157-8;P16157-15;P16157-10;P16157-13;P16157-4;P16157-7;P16157-6;P16157-9;P16157-11;P16157-14 H0YBS0 ANK1 Ankyrin-1 1 RDS(1)RDVDEEKELLDFVPK;RDS(1)RDVDEEKELLDFVPK 103.95 1.8001e-09 10186500.0 1008.6600000000001 1193.73 829.6700000000001 1499.27 1408.18 1053.25 1501.4099999999999 1456.99 1172.23 1374.9699999999998 1614.8899999999999 True False 1111.0584206637536 1294.329816495799 885.9763954110076 1591.8765028107816 1309.2742947572724 1044.672681203924 1558.546979153076 1427.929191463456 1122.9652496396332 1288.1541595461513 1416.2687676311496 0.7844968737975556 0.9139012637133094 0.6255708066576172 1.123993227269534 0.9244532709332876 0.7376231864176762 1.1004598948827355 1.0082331998691247 0.7929040555754854 0.9095407517181342 1.0 10.467879358652443 -6.251597420303531 24.997156526513443 0.9237023388879778 0.7885808350182058 0.25415806218340575 0.12740608626635563 963.0474113750894 2445994.706190529 0.018378903647997134 0.04798086619419396 5.602767228111933e-07 6.251597420303531 -0.13512150386977206 RDS(ph)SALQDLYIPPPPAEPYIPR ddPTM_A549_PD325901_60min_R1 1 RDSSALQDLYIPPPPAEPYIPR 22 1 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2;A0A2R8Y7K8 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 RDS(0.483)S(0.483)ALQDLY(0.035)IPPPPAEPYIPR 46.578 0.006125899999999999 1197700.0 648.21 687.94 488.06 666.18 907.89 888.57 748.06 828.34 874.66 788.38 1002.8 True False 714.0158020130193 745.9151181256397 521.182686543199 707.3284255954475 844.1229384504676 881.3337805244443 776.5278326541385 811.8181088798408 837.901081912083 738.6015522542273 879.4619572729523 0.8118779852934734 0.8481493849246003 0.5926153851603649 0.8042740447679411 0.959817455968119 1.0021283731900084 0.8829578428406462 0.9230849636715811 0.9527428389401381 0.8398334301400519 1.0 9.780477362422852 -6.701224202546231 4.2265813291041985 0.966899883328959 0.7522514950175528 0.519309362909028 0.07767874044682038 0.09397772955354763 3.3734790367627787 0.009692190811614721 0.020470881481197994 1.9896459281727778e-07 6.701224202546231 -0.2146483883114062 RDS(ph)SDDWEIPDGQITVGQR ddPTM_A549_MK2206_60min_R1 4 RDSSDDWEIPDGQITVGQR 19 1 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 RDS(0.868)S(0.132)DDWEIPDGQITVGQR;RDS(0.825)S(0.174)DDWEIPDGQITVGQR;RDS(0.5)S(0.5)DDWEIPDGQITVGQR;RDS(0.676)S(0.324)DDWEIPDGQITVGQR 103.29 8.379299999999999e-10 51537000.0 1593.28 1945.7 1559.11 1293.87 2332.12 1921.8100000000002 1641.25 1828.15 2988.54 2507.3500000000004 2250.33 True False 1862.186712043931 2044.7278192433653 1780.2152421613675 1610.8682080840317 1989.0682373406828 2125.1746586057666 1939.443880315892 2087.2958609745688 2311.6404617177177 1940.937893569796 1691.5109550515429 1.100901360693338 1.208817367181083 1.0524408587747642 0.9523250223554989 1.1759121224728177 1.256376526713662 1.1465748267984432 1.2339830580115667 1.3666127640582018 1.1474580686417444 1.0 10.724096805422338 -6.962252788616681 24.998618153122237 1.1864536551722096 1.0833092506829156 0.21886275266856037 0.10074855929367878 308.35544300073957 204211.57182823846 0.020669133808034684 0.03906093711461353 1.0908052295739235e-07 6.962252788616681 -0.10314440448929396 RDS(ph)SDDWEIPDGQITVGQR ddPTM_A549_PD325901_60min_R1 2 RDSSDDWEIPDGQITVGQR 19 1 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 RDS(0.813)S(0.187)DDWEIPDGQITVGQR;RDS(0.791)S(0.209)DDWEIPDGQITVGQR 135.58 3.4777e-17 101420000.0 3320.8999999999996 2723.2 2804.5 2685.3 2887.3999999999996 3301.0 2785.1000000000004 2802.6000000000004 3239.4 2677.3 3598.5 True False 3658.0353232826315 2952.6936210712297 2994.8302348285097 2851.1648822412167 2684.598984989238 3274.117750443062 2891.0885045652 2746.6999444028347 3103.2592833169474 2508.254821089123 3155.9073127709594 1.1591073376837522 0.9356084727592004 0.9489601366647805 0.9034374586045204 0.8506583745744098 1.0374568787852996 0.9160879005748611 0.8703360625604587 0.9833176249375379 0.7947808894573706 1.0 11.623839119490865 -8.976343463994665 24.85460828479002 0.9926401817811922 0.947213150492089 0.0 0.1002275900301526 341.782778080933 359096.27952707454 0.01358703940896512 0.014029280706026584 1.055982050131176e-09 8.976343463994665 -0.04542703128910319 RDS(ph)SDTTPLLNGSSQDR ddPTM_A549_MK2206_60min_R1 2 RDSSDTTPLLNGSSQDR 17 1 B4DQA8;E9PCW1 B4DQA8 GOSR1 Golgi SNAP receptor complex member 1 1 RDS(0.829)S(0.107)DT(0.063)T(0.001)PLLNGSSQDR;RDS(0.866)S(0.111)DT(0.019)T(0.003)PLLNGSSQDR 99.11 2.9311e-07 60641000.0 3570.8999999999996 3480.6 2981.3 2885.8 4547.8 3040.8 3067.6000000000004 3265.2 4614.1 4206.1 4293.1 True False 4173.580619877029 3657.747673155398 3404.0931694721253 3592.821129548485 3878.824644434229 3362.575437680322 3624.943212342438 3728.05209925562 3569.013717203627 3255.9390887366844 3227.0047864676644 1.2933295411828325 1.1334807089515453 1.0548770128098586 1.1133609545963052 1.2019891202826687 1.0420112953600715 1.123315102457708 1.1552669877928536 1.1059833974124134 1.0089663028670905 1.0 11.655980002371678 -14.99999999999764 0.1127761270926406 0.5590173022887311 1.2073264797438805 0.4409007285968578 0.06165907767862156 64.13651000010015 0.5099396876654402 6.490000404772371 0.28614765558482025 1.000000000005436e-15 14.99999999999764 0.6483091774551494 RDS(ph)SDTTPLLNGSSQDR ddPTM_A549_PD325901_60min_R1 2 RDSSDTTPLLNGSSQDR 17 1 B4DQA8;E9PCW1 B4DQA8 GOSR1 Golgi SNAP receptor complex member 1 1 RDS(0.988)S(0.01)DT(0.002)TPLLNGSSQDR;RDS(0.974)S(0.024)DT(0.001)TPLLNGSSQDR 93.15299999999999 2.4049e-06 35311700.0 6733.799999999999 6950.9 7919.7 8069.4 8734.4 8040.4 7523.5 8529.4 9344.0 9514.3 9026.5 True False 7417.410418838439 7536.67673718567 8457.178467024909 8567.828511062924 8120.925876044198 7974.921648186129 7809.810909517172 8359.274425815145 8951.304174635294 8913.565474279409 7916.297723697944 0.9369797192738148 0.9520456405554514 1.068324962274701 1.0823024613405559 1.0258489712600989 1.0074054724233892 0.9865484071092985 1.0559575596545747 1.1307437500536384 1.1259765341563746 1.0 12.950610156323092 -8.375938067036008 6.810756662492246 1.063287187834082 1.0121877597756426 0.27098945781634165 0.052836032621258945 0.4080105317393747 21.8532207448399 0.010375891171937195 0.012548787668627956 4.20786630770453e-09 8.375938067036008 -0.05109942805843937 RDS(ph)SEGPPGSEGDGGGQSKPSNASGGVDK ddPTM_A549_MK2206_60min_R1 2 RDSSEGPPGSEGDGGGQSKPSNASGGVDK 29 2 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 RDS(0.85)S(0.15)EGPPGSEGDGGGQSKPSNASGGVDK;RDS(0.791)S(0.209)EGPPGSEGDGGGQSKPSNASGGVDK 232.4 1.9764999999999993e-105 18017700.0 2456.1 2683.3 2707.0 2462.1 3124.1000000000004 2282.6000000000004 2000.25 2394.5 3635.9 3956.3 3878.8 True False 2870.6296341202406 2819.8685086990376 3090.8933048539375 3065.314610527868 2664.549028470245 2524.1432169327477 2363.6695333446237 2733.9277078486994 2812.3744553392125 3062.5690822303172 2915.5869105659726 0.9845803682672574 0.9671701085225567 1.0601273087256158 1.0513542228562243 0.9138979938529782 0.8657410306601911 0.8107011061062107 0.9376937788892701 0.964599767253474 1.0504125502593276 1.0 11.509570613279337 -6.759575676440673 24.99925712669849 0.9530967976131077 1.0154995291284261 0.23023561225794975 0.06609420409766562 77.0346492609604 1033293.8060522556 0.010312010364160781 0.02063635203531916 1.7394995613173307e-07 6.759575676440673 0.06240273151531839 RDS(ph)SES(ph)QLASTESDKPTTGR ddPTM_A549_MK2206_60min_R1 1 RDSSESQLASTESDKPTTGR 20 2 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 2 RDS(0.779)S(0.222)ES(0.998)QLASTESDKPTTGR 120.13 1.9411000000000002e-14 42483000.0 5821.6 5420.7 6495.9 4232.7 7568.6 5846.3 5979.5 5230.1 8654.7 7948.9 8743.2 True False 6804.143755545135 5696.590476318295 7417.116298116254 5269.711690013126 6455.268966063796 6464.951585540142 7065.897750098323 5971.482691509499 6694.42426871594 6153.237969249192 6572.022139955769 1.0353196642747355 0.8667941700446912 1.1285896699925257 0.801840221744687 0.9822348173202049 0.9837081263368436 1.0751481963427894 0.9086218159864095 1.0186247286076544 0.9362777297780992 1.0 12.682121625137322 -7.252598713666669 3.811648164326241 1.0049136541630923 0.9570994060422213 0.0 0.0892699944369698 0.5033131732139574 16.562540844114036 0.011601049213577016 0.019929730692341375 5.58986457398888e-08 7.252598713666669 -0.047814248120870984 RDS(ph)SES(ph)QLASTESDKPTTGR ddPTM_A549_PD325901_60min_R1 1 RDSSESQLASTESDKPTTGR 20 2 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 2 RDS(0.846)S(0.157)ES(0.94)QLAS(0.04)T(0.014)ES(0.003)DKPTTGR 88.413 3.8802e-06 31908000.0 7157.8 6725.8 8638.0 9306.1 9655.2 8619.2 9488.3 9622.4 11234.0 10554.0 11725.0 True False 7884.454586706142 7292.606770197152 9224.226624513693 9880.916661313448 8977.05206063175 8549.008092886657 9849.382448696979 9430.473683373228 10761.87404728734 9887.618638843089 10282.899330898845 0.7667540382326149 0.7091975264489625 0.8970453106349129 0.9609076529245513 0.8730078717834779 0.8313810937736152 0.9578409874247041 0.9171025972252609 1.0465797340784262 0.9615594124443108 1.0 13.327959478766376 -4.556934606121604 0.25633069458699703 1.0336767163535765 0.3612492779105159 0.5869201747480969 0.06194686075950463 5.686827797165536 0.21100902097842159 0.03320553141246716 1.2843499399471885 2.7737377286832763e-05 4.556934606121604 -0.6724274384430606 RDS(ph)SESQLASTESDKPTTGR ddPTM_A549_MK2206_60min_R1 4 RDSSESQLASTESDKPTTGR 20 2 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 RDS(0.913)S(0.087)ESQLASTESDKPTTGR;RDS(0.988)S(0.012)ESQLASTESDKPTTGR;RDS(0.952)S(0.041)ES(0.007)QLASTESDKPTTGR;RDS(0.989)S(0.011)ESQLASTESDKPTTGR 224.39 1.1725999999999998e-75 245103000.0 18892.9 19791.4 16900.399999999998 15469.599999999999 20500.9 15792.400000000001 14838.000000000002 15736.199999999999 22087.199999999997 22559.5 25522.300000000003 True False 22081.559632942593 20798.697724095764 19297.130849410234 19259.652694456727 17485.244767378023 17463.541285853305 17533.87253381702 17966.854540091346 17084.48446601069 17463.293281746806 19184.40853035422 1.1510159199333356 1.0841458933272485 1.0058757255339752 1.0039221518861763 0.9114299635410847 0.9102986551929344 0.9139647180716743 0.9365341919019073 0.8905400674187605 0.9102857278146362 1.0 14.227646665810001 -5.695202342492046 1.0896625029506362 0.9394806891069201 1.181843887623071 0.8355110762182953 0.03236700777530344 0.3757405471498506 0.5565849999726935 0.006616469738967742 0.0873254074209901 2.0174262040148075e-06 5.695202342492046 0.24236319851615096 RDS(ph)SESQLASTESDKPTTGR ddPTM_A549_PD325901_60min_R1 2 RDSSESQLASTESDKPTTGR 20 2 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 RDS(0.982)S(0.018)ESQLASTESDKPTTGR;RDS(0.978)S(0.022)ESQLASTESDKPTTGR 242.36 3.393799999999999e-86 100356000.0 11395.7 11084.1 11197.6 10616.7 13158.300000000001 11511.5 11389.0 11911.3 12010.2 12852.5 13753.9 True False 12552.58307492906 12018.196006652328 11957.536472638874 11272.46944672489 12234.10640167068 11417.754160625664 11822.414627299926 11673.719777265913 11505.45306059555 12040.990956578627 12062.257493155614 1.0406495701199936 0.9963471608421319 0.9913182900815904 0.9345240269593924 1.014246828059555 0.9465685977193196 0.9801162538611218 0.967788971831337 0.9538391190143298 0.9982369356159863 1.0 13.558212317417116 -5.279838657527353 1.6749462552184975 0.9751044952786291 1.0617559404322128 0.40318265251461516 0.023088552556383493 0.7165553605918579 1.9677195233205103 0.0032867737439781198 0.0984915173934696 5.250024649461826e-06 5.279838657527353 0.0866514451535837 RDS(ph)SGGTKDGDRPK ddPTM_A549_MK2206_60min_R1 1 RDSSGGTKDGDRPK 14 3 Q9Y478;F5H4Y8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 RDS(0.962)S(0.031)GGT(0.007)KDGDRPK 63.827 0.0016000999999999997 32777000.0 2041.3 1681.0 1526.3 1050.6 1001.3 770.84 617.08 795.85 942.44 2436.4 2370.7 True False 2385.8215350065752 1766.5557198684771 1742.7522908010947 1307.9970471632264 854.0100964140892 852.40977715782 729.1954483871018 908.6641746884062 728.978844767427 1886.0155478467107 1781.989762008547 1.33885254891556 0.9913388715978516 0.9779810905517066 0.7340092940202609 0.47924523171867306 0.47834717983847297 0.409202939283556 0.5099154855212058 0.4090813877324232 1.0583761972464492 1.0 10.799273332890088 -5.770392464250141 1.268897763815592 0.6429454964767813 1.328064959251317 0.5058722764447364 0.21720393759783937 0.5194795874401885 1.2211781934535142 0.03793566032305024 0.3633656726683471 1.6967096728972488e-06 5.770392464250141 0.6851194627745356 RDS(ph)SVIKEEIK ddPTM_A549_PD325901_60min_R1 1 RDSSVIKEEIK 11 2 H0YLF2;E5RGZ2;H0YKJ1;Q6NT76-4;Q6NT76-2;Q6NT76-3;Q6NT76;Q6NT76-5 H0YLF2 HMBOX1 Homeobox-containing protein 1 1 RDS(0.95)S(0.05)VIKEEIK 60.55 0.0016962 5679000.0 1045.1 843.23 935.74 934.86 1106.6 1035.4 846.55 1122.3 1272.2 1011.2 1371.1 True False 1151.1977826380437 914.2919514159425 999.2449434617324 992.6041789788941 1028.876233562752 1026.968045685776 878.7659234999345 1099.9148460726815 1218.733858194672 947.3526594275284 1202.4633921190118 0.9573661786155281 0.7603490945406278 0.8309982241545311 0.8254755907618123 0.8556403798286449 0.8540534808931077 0.7308047207585677 0.9147179475745897 1.0135309450435641 0.7878432438247281 1.0 10.231777257815585 -8.560132745263177 4.215523727820238 1.005814092405935 0.8289065209522158 0.10038036608377643 0.0853664554624303 0.07943901614137999 3.1441965445243456 0.00845020557739263 0.009733013707843212 2.753386981973521e-09 8.560132745263177 -0.17690757145371905 RDS(ph)TEAPKPK ddPTM_A549_MK2206_60min_R1 2 RDSTEAPKPK 10 2 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 RDS(0.908)T(0.092)EAPKPK;RDS(0.734)T(0.266)EAPKPK 105.14 6.7196e-05 64958000.0 6525.9 6873.0 6004.700000000001 6579.0 8076.4 6985.700000000001 6150.6 6586.1 8427.4 9076.0 8500.7 True False 7627.312377063346 7222.80634304345 6856.256751997204 8190.85529534253 6888.37225874239 7724.922137267634 7268.084405344047 7519.699844085334 6518.607355792427 7025.72529644424 6389.741582615291 1.1936808834046029 1.1303753445514442 1.0730100213522205 1.2818758301004798 1.0780361255115127 1.208956894013523 1.1374613998660732 1.1768394303369552 1.0201676032607867 1.0995319928992564 1.0 12.641541870761095 -8.785721395024625 7.83066900833216 1.009316853794109 1.1583772511942776 0.40169404342873405 0.06230191573259196 0.08427721063421567 20.90612541977195 0.008807732343318704 0.009457514309171283 1.6378668951942005e-09 8.785721395024625 0.14906039740016852 RDS(ph)TEAPKPK ddPTM_A549_PD325901_60min_R1 2 RDSTEAPKPK 10 2 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 RDS(0.824)T(0.176)EAPKPK;RDS(0.998)T(0.002)EAPKPK 139.74 3.0299e-08 91433000.0 13280.300000000001 14550.7 13914.099999999999 13348.599999999999 17052.5 14355.8 14773.1 15130.400000000001 13813.2 15081.8 15512.7 True False 14628.506279559859 15776.938554686094 14858.394498280391 14173.112705129823 15854.791227931368 14238.89112445032 15335.298404650506 14828.61230243083 13232.679240696945 14129.532574123905 13604.73624310742 1.0752510021626558 1.1596651543082417 1.0921486629928687 1.041777837649029 1.1653876227085178 1.0466128023366996 1.1272029189408095 1.089959558013737 0.9726523913612092 1.0385745318129458 1.0 13.731821366680995 -8.726691807194516 6.716499801138766 0.9870623838740505 1.101265633521389 0.5090902741627257 0.04112399398895702 0.07628542694384012 10.059080832357992 0.0060262381617521826 0.006772931980715227 1.8763255516946607e-09 8.726691807194516 0.11420324964733852 RDS(ph)TEITSILLK ddPTM_A549_MK2206_60min_R1 2 RDSTEITSILLK 12 1 Q8IYU2-3;Q8IYU2-4;Q8IYU2 Q8IYU2-3 HACE1 E3 ubiquitin-protein ligase HACE1 1 RDS(0.477)T(0.477)EIT(0.043)S(0.004)ILLK;RDS(0.476)T(0.476)EIT(0.043)S(0.005)ILLK 42.556000000000004 0.034258 1665870.0 137.51 133.86 107.1 104.34 363.57000000000005 324.9 95.79799999999999 236.82 220.7 436.63 356.195 True False 160.71832620327942 140.67290223771232 122.28839045063046 129.90330468400057 310.0893346182667 359.2807023488346 113.2032565706027 270.38996023083286 170.71180238547933 337.9949797472951 267.7419510181106 0.6002732317148466 0.5254047851029401 0.4567397450628072 0.48518098934452614 1.1581649175227369 1.3418917020012755 0.4228073192868659 1.0098901543170689 0.6375982610731481 1.2623908149695688 1.0 8.064699394439144 -6.727794383538001 24.94290205062351 0.8663388941768838 0.5132097334390855 0.37086592955103614 0.26412604504027026 175.54611545662297 130141.25594137181 0.03549083296147556 0.0738767403285198 1.8715680233971065e-07 6.727794383538001 -0.3531291607377983 RDS(ph)TSSLQR ddPTM_A549_MK2206_60min_R1 1 RDSTSSLQR 9 1 Q96CC6;F8WCF7;B8ZZ07;A0A1B0GXG1;F8WBS4 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 RDS(0.25)T(0.25)S(0.25)S(0.25)LQR 43.512 0.053811000000000005 2244700.0 297.35 226.97 308.69 167.49 183.38 200.28 173.66 302.31 359.05 380.54 395.39 True False 347.53541049047436 238.52180353274733 352.4668837367426 208.5250575189119 156.40504492201708 221.4734966648957 205.21177410854995 345.1633682855464 277.7257482850312 294.5757497034921 297.20375079114154 1.1693506880897446 0.8025531403887541 1.1859435918910626 0.701623236462624 0.5262552861653821 0.7451907860359914 0.6904750480513333 1.161369489337664 0.9344624606713042 0.9911575776528598 1.0 8.21530851296494 -8.251238172997596 24.946665850297784 0.9826108211117021 0.8240669824289026 0.1714680729331115 0.19377571124283657 1099.4490727673747 2688662.839363406 0.03133166462668064 0.040210675868586176 5.607403740498944e-09 8.251238172997596 -0.15854383868279942 RDS(ph)TSSLQR ddPTM_A549_PD325901_60min_R1 1 RDSTSSLQR 9 1 Q96CC6;F8WCF7;B8ZZ07;A0A1B0GXG1;F8WBS4 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 RDS(0.25)T(0.25)S(0.25)S(0.25)LQR 64.82 0.0049036 3055300.0 538.69 574.0 441.25 574.04 416.84 545.39 274.17 464.3 535.11 591.11 496.84 True False 593.3774122373818 622.3729944531751 471.19587845180223 609.4971470605695 387.56259641993273 540.9485246634782 284.6036893815808 455.0391722636963 512.6211875951507 553.7872137205366 435.7318297282542 1.3617949659712578 1.428339524430245 1.0813896215607324 1.3987895890935595 0.8894521124647644 1.2414712163691206 0.6531624957466958 1.04431014954194 1.1764602735468024 1.270935873713674 1.0 8.76729669415436 -6.1740886364989915 1.0637841252150788 1.0528798456348794 1.3990754688032805 0.284337469970953 0.1908843997030896 0.5921338187284737 1.0934471853420524 0.02668694200835014 0.15925349493938187 6.697479045532261e-07 6.1740886364989915 0.34619562316840113 RDS(ph)VLAASR ddPTM_A549_MK2206_60min_R1 2 RDSVLAASR 9 1 Q14643;A0A3B3ITU8;A0A3B3IS59;A0A3B3IRP0;A0A3B3IU13;A0A3B3IU05;A0A3B3ITQ1;A0A3F2YNW8;A0A3B3ISE3;A0A3B3IU04;Q14643-6;Q14643-2;Q14643-3;Q14643-5;Q14643-7;Q14643-8;Q14643-4;A0A3B3IRZ9;A0A3B3ISR4 Q14643 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 1 RDS(1)VLAASR;RDS(1)VLAASR 112.02 0.00012384 35384000.0 2408.8 2988.7 2842.2 2578.6 3719.4 2514.7 2808.7 3077.5 4214.4 4329.0 4181.4 True False 2815.346550494214 3140.8120642301687 3245.266697841103 3210.357115757753 3172.2811870593887 2780.8038848772358 3319.0044335983207 3513.7450494484756 3259.8451290138855 3351.0758933789252 3143.0429792308364 0.8957391194132458 0.9992902053788607 1.0325238055240602 1.0214168679753115 1.009302516071768 0.884748921110125 1.0559844251352062 1.1179436847243995 1.0371621229982775 1.0661883771627578 1.0 11.617946284924503 RDS(ph)VLAASR ddPTM_A549_PD325901_60min_R1 2 RDSVLAASR 9 1 Q14643;A0A3B3ITU8;A0A3B3IS59;A0A3B3IRP0;A0A3B3IU13;A0A3B3IU05;A0A3B3ITQ1;A0A3F2YNW8;A0A3B3ISE3;A0A3B3IU04;Q14643-6;Q14643-2;Q14643-3;Q14643-5;Q14643-7;Q14643-8;Q14643-4;A0A3B3IRZ9;A0A3B3ISR4 Q14643 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 1 RDS(1)VLAASR;RDS(1)VLAASR 110.9 3.4254000000000003e-06 19549000.0 1142.9 1040.9 1062.6 1056.7 1109.0 1193.5 1362.4 1373.2 1131.5 1286.0 1304.4 True False 1258.9263666414886 1128.6202960388682 1134.7144259328845 1121.969959060177 1031.1076658423028 1183.780531703664 1414.2468775338868 1345.8104487454398 1083.9469898972425 1204.801740529867 1143.9670692728744 1.100491789017742 0.9865846022615311 0.9919117922285376 0.9807712032946201 0.901343835445974 1.0348029794739597 1.2362653746954508 1.1764415994953952 0.947533385367656 1.0531786909702394 1.0 10.159829807337378 RDS(ph)YRDR ddPTM_A549_MK2206_60min_R1 2 RDSYRDR 7 2 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RDS(1)YRDR;RDS(1)YRDR 81.33800000000001 0.0050758 83261000.0 2090.49 1853.65 1598.5 1235.99 1777.15 1120.05 1217.56 1200.48 1697.44 2311.0 2257.9 True False 2443.3136044265393 1947.9928674207038 1825.1913364643592 1538.8076054857 1515.7335891763696 1238.5729475709825 1438.7748916480828 1370.6517163158105 1312.972550254681 1788.943494940795 1697.2011151301729 1.4396134804796783 1.1477678455751519 1.0754125248877 0.9066736945713565 0.8930783604040439 0.7297738238146195 0.8477338830511733 0.8075953427656589 0.7736104687593125 1.0540551022461389 1.0 10.728941816313014 -5.363853785603319 0.9831105683978989 0.8680668973523414 1.661785593181623 0.7805920151280935 0.09139089620939034 0.5995013178093686 0.49183819128264106 0.014882880053274882 0.4816785288954512 4.326594704529358e-06 5.363853785603319 0.7937186958292816 RDS(ph)YSR ddPTM_A549_MK2206_60min_R1 1 RDSYSR 6 1 O75159 O75159 SOCS5 Suppressor of cytokine signaling 5 1 RDS(0.988)Y(0.006)S(0.005)R 49.097 0.042349 8019900.0 258.08 204.57 280.46 242.07 223.21 207.99 222.14 227.93 223.82 448.5 347.54 True False 301.63759454979515 214.98173921088298 320.23344524541375 301.37716086693524 190.3761046844991 229.99936374741185 262.4999625732656 260.23977550634976 173.12512736709562 347.18353850322194 261.23622638395875 1.1546545390165583 0.822939996441795 1.2258385817238926 1.1536576111154595 0.7287507836095016 0.8804267575407566 1.0048375227540205 0.9961856328603352 0.6627148530029692 1.329002272421972 1.0 8.029211163230833 -6.752448154352949 24.996376479147433 0.8584792161939825 1.0800036394163082 0.008777113955026561 0.19903997877396498 194.93040182751636 541919.0807223043 0.023382389988604254 0.04811953621423159 1.7682833010516248e-07 6.752448154352949 0.22152442322232568 RDS(ph)YSR ddPTM_A549_PD325901_60min_R1 2 RDSYSR 6 1 O75159 O75159 SOCS5 Suppressor of cytokine signaling 5 1 RDS(1)YSR;RDS(0.996)Y(0.001)S(0.003)R 70.256 0.041027 19538100.0 1721.38 2100.4700000000003 1962.88 2089.26 2031.49 1727.53 1484.06 1647.58 2044.65 2146.66 3042.26 True False 1896.1332303870197 2277.483978500106 2096.0928405563136 2218.308845146274 1888.8051506600373 1713.4615684407463 1540.5367154087921 1614.7177243984945 1958.720470961907 2011.119521248712 2668.0813064750805 0.7106729565494706 0.8536036637912621 0.7856180527442599 0.8314247544715867 0.7079263836810958 0.6422074036058802 0.5773949660642325 0.6051980951554168 0.7341307276537455 0.7537699531000015 1.0 11.381586916199982 -10.387135703169768 0.8884468923422503 0.9898930046667148 0.7188004615408303 0.1286210985097801 0.1078686749127859 0.3253738757293825 0.4870957637300424 0.051781611756285685 0.01803549038283465 4.100759473149872e-11 10.387135703169768 -0.2710925431258845 RDS(ph)YYDR ddPTM_A549_MK2206_60min_R1 3 RDSYYDR 7 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RDS(0.999)Y(0.001)Y(0.001)DR;RDS(1)YYDR;RDS(1)YYDR 130.66 0.0023835 37534200.0 2255.44 2859.56 2143.5499999999997 1882.94 3042.92 2184.14 2021.9299999999998 2321.66 3675.3999999999996 3496.4300000000003 3550.26 True False 2636.1031317862316 3005.0993898317065 2447.537622319786 2344.2603845283893 2595.310498931751 2415.2642450852054 2389.2885087141576 2650.7624147855563 2842.927768407752 2706.584034623903 2668.6324598086912 0.987810487763912 1.1260821544706594 0.9171505103011618 0.8784500750232366 0.972524518838313 0.9050569089076997 0.8953231832027707 0.9933036694665641 1.065312594081073 1.0142213569634584 1.0 11.38188490714303 -8.522383073874758 23.543364352413935 1.0307613349880786 0.9548244474702139 0.19247438816046825 0.06495716934953986 10.420689543067704 494992.81702110625 0.011688267802373436 0.013339337244806591 3.0034259314482536e-09 8.522383073874758 -0.07593688751786476 RDS(ph)YYDR ddPTM_A549_PD325901_60min_R1 3 RDSYYDR 7 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RDS(0.993)Y(0.005)Y(0.002)DR;RDS(0.999)Y(0.001)YDR;RDS(1)YYDR 68.657 0.0094544 43932000.0 2029.28 2124.96 1846.9099999999999 1836.12 2485.26 1811.6800000000003 1647.68 2063.1 2209.4900000000002 1982.91 2154.25 True False 2235.2910117230203 2304.0378367477692 1972.2524189720516 1949.5329622689253 2310.7039112815537 1796.9262787405896 1710.383364045092 2021.9498520293591 2116.6328190084464 1857.7087241944616 1889.2909069158923 1.1831375483471436 1.2195251818095691 1.0439114546904726 1.0318860664244518 1.2230535291431548 0.9511114842943482 0.9053043963659088 1.0702162618937394 1.1203318722703592 0.9832835787194965 1.0 10.883629145018336 -5.764140654310796 24.98719577764823 1.0503999108600741 1.201331396519254 0.365602408120264 0.08207257985953091 55.41123621349927 512587.3560338504 0.011579165282749188 0.03853256022210412 1.7213110062545432e-06 5.764140654310796 0.1509314856591799 RDSFDDRGPS(ph)LNPVLDYDHGSR ddPTM_A549_MK2206_60min_R1 1 RDSFDDRGPSLNPVLDYDHGSR 22 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(0.471)FDDRGPS(0.529)LNPVLDYDHGSR 44.555 0.010019 3737600.0 411.71 330.22 302.31 449.7 556.44 381.21 364.72 335.3 604.09 623.94 607.05 True False 481.19658265691334 347.0267875163404 345.1821038014016 559.8765201878003 474.5884131116109 421.54938917328184 430.9849029878521 382.82980181318413 467.2645795335037 482.99152065485026 456.3027312723197 1.0545555607681363 0.7605187603166814 0.7564760851615377 1.22698481034002 1.0400735752519052 0.9238370938474677 0.9445152821814734 0.8389820519937077 1.0240231923017835 1.0584892168147089 1.0 8.833847479063962 -6.215278734808087 24.999919156041194 1.0018395459499967 0.8475170270130312 0.24391218076863863 0.11695848348811283 437.661770273778 237030.53926668217 0.01544421446922683 0.04086138497081267 6.091458155035254e-07 6.215278734808087 -0.15432251893696547 RDSFIGT(ph)PYWMAPEVVMCETSK ddPTM_A549_MK2206_60min_R1 2 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.386)FIGT(0.573)PY(0.041)WMAPEVVMCETSK;RDS(0.392)FIGT(0.601)PY(0.007)WMAPEVVMCETSK 73.696 3.2715999999999996e-05 7512900.0 1229.85 1588.04 1346.36 1264.85 1799.6599999999999 1686.65 1355.69 1435.56 2450.6000000000004 1508.52 2051.39 True False 1437.4186130543453 1668.8644529327407 1537.2940930635937 1574.7383067812746 1534.9323979951866 1865.130183492342 1602.0013246644032 1639.0550262181168 1895.543012804059 1167.744284287359 1541.9732475162255 0.9321942617160873 1.0822914441744749 0.9969654762427501 1.0212487858124817 0.9954338705082075 1.2095736333277183 1.0389293894980796 1.0629594442434513 1.229296951719075 0.757305151803596 1.0 10.59056202007685 -7.210875965704844 24.91041495311828 1.1075755090342432 1.0102725827943544 0.0 0.12720245988576948 434.93267078386447 214272.50549711342 0.01348726557401808 0.023360581476896933 6.153525920203235e-08 7.210875965704844 -0.09730292623988879 RDSITPDIATKPGQPLFLDS(ph)ISPK ddPTM_A549_PD325901_60min_R1 1 RDSITPDIATKPGQPLFLDSISPK 24 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 RDSITPDIATKPGQPLFLDS(0.545)IS(0.455)PK 87.729 7.1702e-08 3255500.0 1561.1 1965.6 1968.3 1539.6 1817.0 1979.2 1898.8 1445.5 1822.4 1917.8 1654.9 True False 1719.58172277892 2131.2480102738004 2101.8806743494215 1634.697595314705 1689.3801883097074 1963.082051401668 1971.0598730632285 1416.6683685271876 1745.8108655667118 1796.7097807062053 1451.3577912754374 1.1848089651744456 1.46845114491092 1.4482167574284435 1.1263229543682338 1.1639998065708514 1.3525831212691757 1.3580799199975924 0.9760986415914954 1.20288110627257 1.237950966678779 1.0 10.503187503631363 -14.999998131744222 0.06875226222633368 0.025300896116642015 1.617432176595465 0.13155430940422685 0.14632816223469905 146.47459182980353 0.7545348017686321 22.742989365834767 3.171041379281698 1.0000043018271564e-15 14.999998131744222 1.5921312804788228 RDSITPDIATKPGQPLFLDSIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 RDSITPDIATKPGQPLFLDSISPK 24 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 RDSITPDIATKPGQPLFLDS(0.013)IS(0.987)PK;RDSITPDIATKPGQPLFLDS(0.184)IS(0.816)PK 82.62 2.4071000000000002e-06 3595000.0 1799.7199999999998 2377.38 2313.99 1932.13 2490.2 2092.85 2289.56 2646.8 3487.2 3096.7 3157.7999999999997 True False 2103.468737070511 2498.378487389006 2642.1485772068586 2405.5019367366112 2123.894878747993 2314.3139978786044 2705.543415455326 3021.992005485044 2697.3547679141097 2397.153319248445 2373.6311091536622 0.8861818203168563 1.0525555035718348 1.1131251890901188 1.0134270348328527 0.8947872609848315 0.9750099705694336 1.1398331463645206 1.2731514993340984 1.1363833063663686 1.0099098002229883 1.0 11.212880024887312 -7.750007634049391 24.81676141955886 1.0901592044238406 0.9945070495560003 0.2939604545699781 0.09170872426471917 286.7437272906425 622479.1199456598 0.0159244389990305 0.02350383827835363 1.7782481516322467e-08 7.750007634049391 -0.09565215486784029 RDSITPDIATKPGQPLFLDSIS(ph)PK ddPTM_A549_PD325901_60min_R1 1 RDSITPDIATKPGQPLFLDSISPK 24 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 RDSITPDIATKPGQPLFLDS(0.137)IS(0.863)PK 94.946 3.0318999999999995e-08 3937000.0 1670.9 1880.6 1790.5 2155.8 2147.7 2280.6 2088.8 2102.8 2115.5 2286.3 2393.9 True False 1840.5285379484333 2039.0847619662738 1912.0140971511667 2288.95886982297 1996.8529611627735 2262.0275497305206 2168.2904270352174 2060.858004385313 2026.5928918494176 2141.9426278175997 2099.4654761824095 0.8766653030633218 0.9712399585031855 0.9107147123123466 1.090257923166771 0.9511244570659848 1.0774302199261252 1.0327821303248848 0.9816108089248989 0.9652899344334537 1.0202323649124392 1.0 11.03580634921037 -5.184208945344959 1.2019052782645416 0.9952906007507537 0.8161762938186824 0.36139886494636797 0.04949686216295939 1.5639141375132746 1.6466328126938652 0.006867378242042372 0.36330699957340495 6.543212949057707e-06 5.184208945344959 -0.1791143069320713 RDSLDKS(ph)GLFPEWK ddPTM_A549_MK2206_60min_R1 1 RDSLDKSGLFPEWK 14 2 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 RDS(0.222)LDKS(0.778)GLFPEWK 49.463 0.0056868000000000005 5987200.0 480.97 534.69 381.23 195.02 948.79 882.87 505.83 472.74 731.04 602.23 906.38 True False 562.1459774124886 561.9034371543581 435.2941465125479 242.79990875478055 809.2242478545127 976.2947173983245 597.7327634304263 539.7523427055311 565.4606072309958 466.18582473310045 681.3008311845896 0.8251068422081266 0.8247508463733515 0.638916212322381 0.356376944869743 1.1877634824655952 1.4329862414828174 0.877340428883872 0.7922379043146833 0.8299719908572835 0.6842584118421448 1.0 9.412148156624571 -6.7722647014477335 24.999602888461155 0.95986622294229 0.6713656396681361 0.3066791593036523 0.22412800003640465 216.31420336479235 499548.62410415517 0.032539889531499354 0.06192795892581217 1.6894109258644773e-07 6.7722647014477335 -0.28850058327415384 RDSLDKS(ph)GLFPEWK ddPTM_A549_PD325901_60min_R1 1 RDSLDKSGLFPEWK 14 2 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 RDS(0.017)LDKS(0.983)GLFPEWK 80.638 0.00010305 14190000.0 987.0 853.74 927.29 811.33 678.34 968.06 925.24 1060.7 1199.2 1040.3 1357.3 True False 1087.1995134090027 925.6876660007907 990.2214756477545 861.4440114358795 630.6957385459583 960.1764403192701 960.4505145107548 1039.543506396947 1148.8017943303346 974.6152804612911 1190.360704633604 0.9133361922793356 0.7776530780942738 0.8318667373622243 0.7236831727413533 0.529835818748812 0.8066264591746708 0.8068567038311164 0.8733012626764431 0.965087128513654 0.8187562615831477 1.0 10.21718309175331 -8.466715968927575 1.467100351459237 0.9872684939363076 0.7570173485135565 0.2878290616468545 0.10199958501275248 0.21108081859663338 0.8813498835138099 0.016993577699426398 0.02039023401206442 3.4141612671948926e-09 8.466715968927575 -0.23025114542275105 RDSLT(ph)GSSDLYK ddPTM_A549_MK2206_60min_R1 1 RDSLTGSSDLYK 12 1 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 RDS(0.193)LT(0.483)GS(0.162)S(0.162)DLY(0.001)K 64.53399999999999 0.019691 19621000.0 5797.6 9181.9 8309.8 5436.1 10990.0 6914.2 6115.4 7675.4 10240.0 11160.0 10856.0 True False 6776.093142288799 9649.219490934183 9488.25459352613 6767.944744035803 9373.385558364967 7645.856054725492 7226.489020980226 8763.411454926674 7920.656349919837 8638.94824904339 8160.155589642215 0.8303877380585459 1.182479841828268 1.1627541275768916 0.8293891788811524 1.1486773083423458 0.9369742979448173 0.8855822590138963 1.0739270052706078 0.9706501625990591 1.058674452238253 1.0 12.9943809449796 -6.2287760555990115 24.99892414717871 0.9846519952996748 1.070934453152412 0.062108944820719825 0.11897889995799771 1125.630095149483 861501.7219556329 0.014481175227061353 0.038311157930139984 5.905054964518159e-07 6.2287760555990115 0.08628245785273725 RDSLTS(ph)PEDELGAEVGDEAGDKK ddPTM_A549_MK2206_60min_R1 1 RDSLTSPEDELGAEVGDEAGDKK 23 2 A8MVW0 A8MVW0 FAM171A2 Protein FAM171A2 1 RDS(0.312)LT(0.312)S(0.377)PEDELGAEVGDEAGDKK 71.17399999999999 8.824600000000001e-05 1977400.0 1181.3 927.05 629.98 975.98 1315.5 1102.0 571.26 933.14 1556.7 1315.2 1165.9 True False 1380.674559987885 974.2328852492986 719.3206369382647 1215.0951438134066 1121.991692632313 1218.6129085516031 675.0505474907877 1065.415452621398 1204.1099355390843 1018.0954065539295 876.374852796965 1.5754383590325978 1.1116623008293975 0.8207910515032931 1.3865016093688791 1.2802645911751778 1.3905156048948457 0.7702760358040314 1.215707467211213 1.3739667811053082 1.161712255097988 1.0 9.77540427717723 RDSS(ph)ES(ph)QLASTESDKPTTGR ddPTM_A549_MK2206_60min_R1 1 RDSSESQLASTESDKPTTGR 20 2 A0A087WVF1;Q96B23-2;Q96B23;K7EQH1 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 2 RDS(0.456)S(0.538)ES(0.644)QLAS(0.128)T(0.043)ES(0.043)DKPT(0.11)T(0.038)GR 75.512 0.00029596 26873000.0 6134.5 5918.8 5832.5 4806.6 8840.3 6075.2 5680.7 6082.9 8333.8 7641.4 9732.7 True False 7169.853625874611 6220.0416387611795 6659.636202645215 5984.217215776471 7539.903580674595 6718.073631608621 6712.809657828173 6945.169703099959 6446.207606343941 5915.202432817211 7315.80198114506 0.9800502589262803 0.8502200653861364 0.9103084282227739 0.81798512742684 1.030632540370435 0.9182962645685383 0.9175767298143152 0.9493381205505114 0.8811347850799794 0.8085514681865912 1.0 12.836800310447693 -8.646767058700046 0.00997870428330922 1.8598527634263569 1.2878618245433892e-06 0.0 0.07460104202426608 1294.694386800216 10.518957046604024 980.3992589462728 978.9487290242248 2.2554486363661925e-09 8.646767058700046 -1.8598514755645323 RDSS(ph)GGTKDGDRPK ddPTM_A549_PD325901_60min_R1 1 RDSSGGTKDGDRPK 14 3 Q9Y478;F5H4Y8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 RDS(0.287)S(0.357)GGT(0.357)KDGDRPK 47.568000000000005 0.0092473 28654000.0 928.1 937.63 1051.0 791.37 949.66 1293.0 534.97 931.0 1070.3 1703.5 1913.0 True False 1022.3200287688907 1016.6473707127711 1122.327180176417 840.2511275683285 882.959157749145 1282.4702366927843 555.328576096817 912.4304746446294 1025.3190130685098 1595.9407192788715 1677.7131275061392 0.6093532988494481 0.6059721140907929 0.6689625072223857 0.5008312290059576 0.5262873272390926 0.7644156892299762 0.33100329668534756 0.5438536896954038 0.6111408418151976 0.9512596004128432 1.0 10.712280334822387 -10.379301475021489 0.7239953643805968 1.0051933607089727 0.5693185111972121 0.6858158624958256 0.10449102930863784 0.2988549913321509 0.28228661623655915 0.07173526710194854 0.020907503096044784 4.1754042119877733e-11 10.379301475021489 -0.4358748495117606 RDSSGGT(ph)KDGDRPK ddPTM_A549_MK2206_60min_R1 1 RDSSGGTKDGDRPK 14 3 Q9Y478;F5H4Y8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 RDS(0.194)S(0.343)GGT(0.463)KDGDRPK 74.12 0.00042015 12154000.0 2133.4 2494.6 1990.5 1288.2 1150.8 1092.9 893.37 764.31 1126.0 2997.7 3466.1 True False 2493.4657633777647 2621.5644847019043 2272.782830924182 1603.809057829496 981.5188444555423 1208.5499525916946 1055.6837650314135 872.6532831012074 870.9627978525137 2320.517488006932 2605.3717105065275 0.957047991778875 1.0062151493125058 0.8723449409383182 0.6155778276711574 0.3767289099276812 0.463868532738744 0.40519506708936015 0.3349438698447943 0.33429502375428194 0.8906665711649203 1.0 11.34727350232822 -6.1694489655593445 3.250039110299792 0.5920025944794582 0.9743969328375919 0.40442381218914025 0.2106240150975934 0.2854639062039577 5.751320380273282 0.04035254834946011 0.11845890803638665 6.769413363957306e-07 6.1694489655593445 0.38239433835813363 RDSTSS(ph)LQR ddPTM_A549_PD325901_60min_R1 2 RDSTSSLQR 9 1 Q96CC6;F8WCF7;B8ZZ07;A0A1B0GXG1;F8WBS4 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 RDS(0.125)T(0.125)S(0.125)S(0.624)LQR;RDS(0.028)T(0.028)S(0.335)S(0.61)LQR 93.258 0.00041059 9030300.0 983.8899999999999 1325.26 822.3299999999999 895.4100000000001 1125.57 1079.07 921.54 1147.5 1204.05 1271.07 1142.59 True False 1083.7737884984638 1436.9443112003746 878.1382588720018 950.7174420763452 1046.5138462057005 1070.2824116845188 956.6097089860368 1124.612212303665 1153.4479656966637 1190.814423277836 1002.0586734747731 1.0815472358922182 1.4339921895167846 0.8763341729551019 0.9487642462886976 1.044363842066027 1.0680835763570318 0.9546444078657232 1.1223017594408131 1.1510782713919614 1.1883679616768619 1.0 9.968751269695055 -5.762137243683893 24.99998922155963 1.0483507176959423 1.257769666982419 0.34208029398400486 0.11629371861979532 14.054942329728467 503599.6692093153 0.014993128457609545 0.051051023165988425 1.729269797213002e-06 5.762137243683893 0.20941894928647664 RDT(ph)DSDTQDANDSSCK ddPTM_A549_MK2206_60min_R1 2 RDTDSDTQDANDSSCK 16 1 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2;A0A087WWE6;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 RDT(0.927)DS(0.056)DT(0.017)QDANDSSCK;RDT(0.818)DS(0.175)DT(0.007)QDANDSSCK 81.807 0.00014112 15685100.0 767.4100000000001 659.16 489.11 498.56 666.44 584.4100000000001 689.86 587.71 884.8299999999999 881.5500000000001 1135.76 True False 896.9300466268537 692.7084285000035 558.4731526919505 620.7072223812086 568.4075588277296 646.2518783000388 815.1986323075218 671.0196922863895 684.4174177831613 682.4072427369348 853.7194466186472 1.0506145200034414 0.8114005499624437 0.6541647316386107 0.7270622976197423 0.66580134853322 0.7569839024514066 0.9548788369953431 0.7859955573744019 0.8016889160648201 0.7993343075875406 1.0 9.737618232137317 -10.721619038760974 0.48910119014136627 1.046929440961996 0.7844834199637087 0.0 0.12545332787503322 1.5576507412383367 0.49278417958369325 0.1964785534170156 0.028216702812838126 1.898370433377178e-11 10.721619038760974 -0.2624460209982873 RDT(ph)DSDTQDANDSSCK ddPTM_A549_PD325901_60min_R1 2 RDTDSDTQDANDSSCK 16 1 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2;A0A087WWE6;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 RDT(0.789)DS(0.203)DT(0.009)QDANDSSCK;RDT(0.668)DS(0.274)DT(0.058)QDANDSSCK 131.18 2.6320999999999996e-10 19504800.0 1039.71 974.86 1019.84 997.05 1024.19 621.3499999999999 892.15 1226.29 944.98 1055.29 1081.41 True False 1145.2605938059523 1057.0148734714676 1089.0524751961166 1058.635514035156 952.2544276636863 616.289931607936 926.101256453212 1201.8306839441059 905.2657768564704 988.6588093030822 948.4034256227987 1.2075669096765242 1.1145203031899065 1.1483008662489342 1.1162291124580974 1.0040605104714364 0.6498183314798024 0.9764845122159472 1.2672146171919256 0.9545155072188815 1.0424454220563875 1.0 9.889357063602763 -6.7427274427793655 4.206566379801876 0.9758123970302285 1.147955198538697 0.25014620598401616 0.13544701539777024 0.22845882759667863 9.167695406746038 0.01963295120456588 0.04069960904382643 1.8083086395064233e-07 6.7427274427793655 0.1721428015084686 RDT(ph)PTLR ddPTM_A549_MK2206_60min_R1 1 RDTPTLR 7 1 Q9UPZ9 Q9UPZ9 ICK Serine/threonine-protein kinase ICK 1 RDT(1)PTLR 90.906 0.0077005 4317800.0 211.16 106.82 92.196 186.58 351.57 259.75 86.98700000000001 148.78 345.08 317.2 314.35 True False 246.79864563365913 112.25668173489036 105.27077914086205 232.29210837589451 299.85451872196285 287.2365725919046 102.7914119220341 169.87002061964077 266.9199309795253 245.54429969503235 236.28821938135857 1.0444813807468631 0.4750837008666654 0.44551852570762207 0.9830879803659847 1.2690201801301448 1.2156195232413074 0.43502554715236724 0.7189102404867599 1.1296370664536963 1.0391728387386714 1.0 7.884403892451841 -6.34793963465879 7.497099413448241 1.0156361602275095 0.6379720596141336 0.21158315014347862 0.26501321266531747 0.2725702451862285 20.831954552981305 0.0381165496351483 0.08898583272128331 4.488077682326702e-07 6.34793963465879 -0.37766410061337585 RDT(ph)PTLR ddPTM_A549_PD325901_60min_R1 2 RDTPTLR 7 1 Q9UPZ9 Q9UPZ9 ICK Serine/threonine-protein kinase ICK 1 RDT(1)PTLR;RDT(1)PTLR 103.55 0.0063894 11994100.0 765.22 386.7 666.0699999999999 723.48 671.94 647.56 478.6 599.73 1035.02 629.58 589.22 True False 842.9045710748096 419.28856612376785 711.2735156042876 768.1677164577055 624.7452524671571 642.2864860578335 496.8133848999689 587.7679146709169 991.5217087790043 589.8282113552053 516.7496753733233 1.631166135645576 0.8113958965157644 1.3764372761152321 1.486537395311853 1.2089901208274838 1.2429354417955207 0.9614198297097111 1.137432576510642 1.9187660022479631 1.141419606948155 1.0 9.013321767112059 RDT(ph)SGLER ddPTM_A549_MK2206_60min_R1 4 RDTSGLER 8 1 Q9H307 Q9H307 PNN Pinin 1 RDT(0.93)S(0.07)GLER;RDT(0.5)S(0.5)GLER;RDT(0.866)S(0.134)GLER;RDT(0.5)S(0.5)GLER 77.867 0.002709 64740000.0 3024.11 3768.21 3374.92 2692.12 3920.48 2938.84 2645.69 2783.4500000000003 4671.360000000001 5200.34 5011.4 True False 3534.505835609041 3959.995793673762 3853.534404291707 3351.689520853859 3343.7825854284533 3249.826098155892 3126.3776266339382 3178.0125614581184 3613.304418629056 4025.5795822070127 3766.931072396183 0.9382985161341713 1.0512525229602272 1.0229904211760463 0.8897666180872843 0.8876675790357479 0.8627251297403339 0.8299534996920498 0.8436609272588979 0.9592170255269885 1.0686629260902034 1.0 11.879173919640518 -4.20385133659835 12.401885720067229 0.9504833647014027 0.9343610991756117 0.0 0.08164617973255776 0.0 0.0 0.010914794145056791 0.0 6.253867323548613e-05 4.20385133659835 -0.01612226552579099 RDT(ph)SGLER ddPTM_A549_PD325901_60min_R1 3 RDTSGLER 8 1 Q9H307 Q9H307 PNN Pinin 1 RDT(0.67)S(0.33)GLER;RDT(0.991)S(0.009)GLER;RDT(0.5)S(0.5)GLER 83.081 0.0021097 41421800.0 2202.06 2627.8199999999997 2480.74 2760.29 2911.17 2212.96 2531.62 3050.17 2612.16 2865.83 2889.33 True False 2425.6115101291066 2849.275613735092 2649.0979343014696 2930.7868442265694 2706.6994621912872 2194.9383874645496 2627.962184455619 2989.3319665379254 2502.379999231091 2684.8810047143916 2533.9607269719386 0.9572411617553724 1.1244355855269912 1.0454376447527343 1.1566031047879872 1.0681694603158944 0.8662085264784203 1.0370966512949913 1.1797072996116051 0.9875370097868146 1.0595590437278803 1.0 11.307178449455769 -7.033031845088565 24.948315411474894 1.0035177113360954 1.0778624502382668 0.05199201721845803 0.08442453724484193 869.2739957521637 656544.7916336781 0.011868788077415402 0.020567090715690437 9.26761865123009e-08 7.033031845088565 0.07434473890217141 RDT(ph)VKIPK ddPTM_A549_MK2206_60min_R1 2 RDTVKIPK 8 2 I3L356;I3L2H1;I3L2B2;O95208-5;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 I3L356 EPN2 Epsin-2 1 RDT(1)VKIPK;RDT(1)VKIPK 97.734 0.00084714 12939700.0 2229.2 2798.63 2768.8999999999996 2458.6000000000004 3545.7 2667.1000000000004 2442.8 2864.2 4116.1 3780.0 3765.5 True False 2605.4344612926348 2941.0683130847815 3161.5716556372636 3060.957110370749 3024.1322269603884 2949.3307517223034 2886.6251398846352 3270.2091212446207 3183.809922061041 2926.095374675986 2830.4224274868952 0.920510817039411 1.039091650957602 1.1169963977583348 1.0814488610057205 1.0684384767419632 1.0420108048468883 1.019856651732244 1.1553784655911619 1.1248532696541396 1.0338016496265676 1.0 11.466801669366102 -5.295284703044638 3.649839104205066 1.0680097946392517 0.909043920229317 0.4789993560011485 0.04507502334174951 0.1966230569114736 4.7252345089822265 0.007539790227608096 0.0797625173507694 5.066584579175158e-06 5.295284703044638 -0.1589658744099347 RDT(ph)VKIPK ddPTM_A549_PD325901_60min_R1 2 RDTVKIPK 8 2 I3L356;I3L2H1;I3L2B2;O95208-5;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 I3L356 EPN2 Epsin-2 1 RDT(1)VKIPK;RDT(1)VKIPK 108.7 0.00059765 17952200.0 2457.1 3081.3 3158.0 3089.7 3447.5 3465.0 3509.7 3554.5 2840.0 3610.2 3493.9 True False 2706.542983178584 3340.9719648232917 3372.3208705966963 3280.5437517821797 3205.359493229342 3436.782188817088 3643.2635540815345 3483.602709048694 2720.6446763660356 3382.2513558794144 3064.1724496569286 0.8832867691508729 1.090334183116017 1.1005649734153404 1.0706132914123279 1.0460767290000996 1.1216020786303582 1.188987765518694 1.136882067273572 0.8878888904149781 1.1038058110137041 1.0 11.581281778159875 -8.7597362056188 24.996940475240155 0.9470586414941066 1.0844407552949111 0.07484090320249337 0.08962311703888962 35.003152577113475 513728.7993861175 0.013906127473353796 0.015372185038277227 1.7388567052719295e-09 8.7597362056188 0.13738211380080456 RDTDS(ph)DTQDANDSSCK ddPTM_A549_MK2206_60min_R1 2 RDTDSDTQDANDSSCK 16 1 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2;A0A087WWE6;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 RDT(0.101)DS(0.887)DT(0.011)QDANDSSCK;RDT(0.024)DS(0.972)DT(0.004)QDANDSSCK 159.04 1.0124e-20 17617500.0 837.6700000000001 1005.5999999999999 1066.95 858.03 1245.8200000000002 1199.9 1021.61 1123.16 1049.12 1342.15 1617.51 True False 979.0482169347756 1056.7807447351227 1218.2595536069107 1068.2473885184302 1062.5615283277748 1326.8726215708432 1207.2233130659663 1282.3713695332417 811.4959951003808 1038.9573828363427 1215.8376259950414 0.8052458617848108 0.8691791750319072 1.001991982778035 0.8786102401167069 0.8739337437909726 1.0913238685839572 0.9929149149977776 1.0547225567918652 0.6674378039882197 0.8545198475709781 1.0 10.247734855702323 -8.734397734023696 24.999766546906788 0.8429566075974658 0.9470573192900397 0.15753182002839694 0.10843357482544551 385.8429086019677 356708.27251857746 0.02394422703272346 0.027146783799722574 1.8433264972270007e-09 8.734397734023696 0.10410071169257384 RDTDS(ph)DTQDANDSSCK ddPTM_A549_PD325901_60min_R1 4 RDTDSDTQDANDSSCK 16 1 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2;A0A087WWE6;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 RDT(0.002)DS(0.819)DT(0.179)QDANDSSCK;RDT(0.13)DS(0.866)DT(0.004)QDANDSSCK;RDT(0.004)DS(0.991)DT(0.004)QDANDSSCK;RDT(0.035)DS(0.965)DTQDANDSSCK 194.15 3.4487e-36 56378500.0 3061.3500000000004 3317.85 3529.55 2837.69 3390.53 3372.3999999999996 2983.96 3158.31 2562.9700000000003 3420.8500000000004 3997.5099999999998 True False 3372.135998353243 3597.456863495587 3769.0864879083474 3012.967666438418 3152.390869493511 3344.9362925156556 3097.5162306855646 3095.315029403736 2455.2572838682577 3204.8569471940873 3505.841612303749 0.9618620494772877 1.026132170623543 1.0750874981575724 0.8594135159627319 0.8991823413899239 0.9541036539633175 0.8835299974233956 0.8829021307011502 0.7003332025187714 0.9141476716879176 1.0 11.775545103832679 -6.2720282165112655 24.337589762927298 0.8689841155905426 1.0215377325115393 0.37000596467569846 0.07552969176322338 477.8109262451589 1098210.9637041378 0.015500869097820632 0.0363814408867718 5.345296293879284e-07 6.2720282165112655 0.15255361692099678 RDTDSDT(ph)QDANDSSCK ddPTM_A549_MK2206_60min_R1 2 RDTDSDTQDANDSSCK 16 1 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;F8WF49;A0A0B4J2C2;A0A087WWE6;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 RDT(0.098)DS(0.411)DT(0.491)QDANDSSCK;RDT(0.095)DS(0.308)DT(0.597)QDANDSSCK 137.89 7.499899999999999e-11 18322700.0 840.47 857.7 965.3 990.28 1321.62 1071.35 1015.2900000000001 1026.84 1273.35 1497.4 1321.25 True False 982.3207884813489 901.3532664670983 1102.194055107316 1232.8986444553593 1127.2114487394279 1184.7195458954268 1199.7550508733723 1172.397714565613 984.9382581221122 1159.1363000105341 993.1471603550825 0.9890989248060048 0.9075727167611646 1.1097993319673245 1.2414057993324552 1.134989348745067 1.1928942589654599 1.2080335108086304 1.1804874054580616 0.9917344553147236 1.1671344854836065 1.0 9.955863695830791 -8.777208040232873 24.629694879768795 0.9960968044795903 1.122917959181991 0.001777502994650515 0.10590820991025898 207.78609499466023 324548.0206700357 0.017564475007411786 0.01872995548232326 1.6702903029093327e-09 8.777208040232873 0.12682115470240085 RDTS(ph)GLER ddPTM_A549_PD325901_60min_R1 2 RDTSGLER 8 1 Q9H307 Q9H307 PNN Pinin 1 RDT(0.182)S(0.818)GLER;RDT(0.248)S(0.752)GLER 87.777 0.0011300999999999998 34429000.0 1967.34 2005.75 1873.46 2163.13 2444.24 2311.41 1784.86 2223.28 2102.63 2376.32 2075.14 True False 2167.0629085208393 2174.7815916802365 2000.6042616301713 2296.74162727533 2272.565014570236 2292.5866433055444 1852.7838240128685 2178.934936270581 2014.2637731927864 2226.278749654693 1819.910935396284 1.1907521771382528 1.1949934193931746 1.0992869061444162 1.2620077074130094 1.248723204179982 1.259724637462182 1.01806291064976 1.1972755885419855 1.1067924995759104 1.2232899458730506 1.0 10.829652132774955 -9.364983134195686 0.4690839604362213 0.9992942225519591 1.2020694141333805 0.0 0.09278940775709119 0.5119489544304683 0.26434033951407215 0.040145097348270174 0.022887754527083363 4.3153583517476553e-10 9.364983134195686 0.20277519158142143 RDVYLS(ph)PR ddPTM_A549_MK2206_60min_R1 6 RDVYLSPR 8 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVY(0.001)LS(0.999)PR 122.51 0.00048437 395402500.0 5626.049999999999 5611.430000000001 4284.76 4266.62 6806.5 4871.0 5146.09 5484.099999999999 7207.6 6252.37 7101.080000000001 True False 6575.589696283615 5897.027818644598 4892.403397453254 5311.942091535847 5805.272866516027 5386.4459868918875 6081.0679409321 6261.487969351873 5575.090108172092 4839.955274540446 5337.685856162174 1.2319177024425902 1.1047910981566444 0.9165776198322244 0.9951769801895316 1.087601073377902 1.0091350693996766 1.1392704825278763 1.1730716527881089 1.0444769996600387 0.9067516157686359 1.0 12.381998684354517 -9.410650775469538 1.9516887746660252 1.0134368114469257 1.0744504221170552 0.17275841098424383 0.08921618092364975 0.569882216530854 4.416030016082053 0.01870281503371455 0.01600981637736379 3.884626106757805e-10 9.410650775469538 0.06101361067012956 RDVYLS(ph)PR ddPTM_A549_PD325901_60min_R1 5 RDVYLSPR 8 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVY(0.006)LS(0.994)PR 122.7 0.00048272 413483700.0 18705.23 18270.440000000002 18696.680000000004 17603.309999999998 20576.31 18020.36 18128.41 18928.210000000003 18602.43 21101.7 22121.629999999997 True False 20604.17117953747 19810.15409891477 19965.54913707024 18690.626478682316 19131.100970015912 17873.608162791308 18818.296562796586 18550.672002656527 17820.634558792888 19769.33506076134 19400.809750566466 1.0620263506751757 1.0210993434609785 1.0291090626507116 0.9633941427695607 0.9860980658014711 0.9212815543572573 0.9699748002655986 0.9561802956247681 0.9185510701826536 1.018995357149158 1.0 14.24382924839209 -6.109555578806532 1.3166561561444066 0.9586808072147417 1.0519096625026076 0.511639849724149 0.030204985196432294 0.30744184794907975 0.9260025623752516 0.004753815313147512 0.025002384129687055 7.770418705502906e-07 6.109555578806532 0.09322885528786595 RDVYLS(ph)PRDDGYSTK ddPTM_A549_MK2206_60min_R1 4 RDVYLSPRDDGYSTK 15 2 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 RDVYLS(1)PRDDGYSTK;RDVYLS(0.999)PRDDGYS(0.001)TK;RDVYLS(0.992)PRDDGY(0.006)S(0.002)T(0.001)K;RDVYLS(1)PRDDGYSTK 127.5 7.109999999999999e-10 145335000.0 34904.6 39802.1 35331.3 31128.700000000004 41761.8 34657.3 31611.6 31472.1 46041.5 53410.4 53415.9 True False 40795.643144462134 41827.85688148548 40341.809612776495 38755.23289742044 35618.69454152194 38324.71248234614 37355.01853282181 35933.36655426398 35613.17376316741 41344.953544866185 40151.25782615785 1.0160489447452496 1.0417570742761477 1.0047458484972918 0.9652308544160247 0.8871127947159098 0.9545083904539163 0.9303573674966081 0.894949959222797 0.8869752952039784 1.0297299706992158 1.0 15.293157563584339 -6.272102087365813 2.7690078806493377 0.9372466636088975 1.0270693166129674 0.3988820745368987 0.043017410389073155 0.21047505890655877 3.1966883846383176 0.006551589648641331 0.01861957912977459 5.344387168754256e-07 6.272102087365813 0.08982265300406989 RDVYLS(ph)PRDDGYSTK ddPTM_A549_PD325901_60min_R1 5 RDVYLSPRDDGYSTK 15 2 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 RDVYLS(1)PRDDGYSTK;RDVYLS(1)PRDDGYSTK;RDVYLS(0.992)PRDDGYS(0.006)T(0.002)K;RDVYLS(0.999)PRDDGYSTK;RDVYLS(0.998)PRDDGYS(0.001)T(0.001)K 186.01 4.6706999999999995e-34 249100000.0 33091.0 37295.6 34868.100000000006 40734.3 39667.3 41369.6 36813.2 41910.1 36215.0 44788.7 41486.8 True False 36450.37395969335 40438.63110091957 37234.45894491852 43250.365196692524 36881.205692755975 41032.699693647155 38214.146470956 41074.17017766258 34693.009491054894 41960.73383831264 36384.18660649332 1.001819124168306 1.1114342485727762 1.023369282584799 1.1887132633871724 1.013660305001128 1.1277619075954342 1.0502954727078082 1.1289017017720622 0.9535188972690513 1.1532684320287676 1.0 15.151023938176882 -8.76913316055288 24.99998995292242 0.9780505855551781 1.081770014557912 0.0 0.07619993723554999 108.26530831174881 351793.41850909666 0.008606272276943333 0.009246411178815823 1.7016366836136188e-09 8.76913316055288 0.10371942900273401 RDYDDMS(ph)PR ddPTM_A549_MK2206_60min_R1 18 RDYDDMSPR 9 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 RDYDDMS(1)PR;RDYDDMS(1)PR;RDY(0.001)DDMS(0.999)PR;RDY(0.012)DDMS(0.988)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDY(0.001)DDMS(0.999)PR;RDY(0.001)DDMS(0.999)PR;RDY(0.001)DDMS(0.999)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDY(0.001)DDMS(0.999)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR 155.26 1.1614000000000001e-05 5049743900.0 19695.809999999998 23048.89 19053.78 17375.66 26807.149999999998 20081.649999999998 19898.21 20110.640000000003 29541.142 31257.12 31338.169999999995 True False 23019.981211677787 24221.98005123102 21755.892513542607 21632.697480023024 22863.85374621686 22206.67687387958 23513.457190397843 22961.384806251986 22850.120504510116 24196.114882987353 23556.03749950792 0.9772433590394255 1.02827056765116 0.9235803141337793 0.9183504432982383 0.9706154418668455 0.942716994500602 0.9981923823516173 0.9747558266848423 0.9700324388169043 1.0271725405214185 1.0 14.523809254855312 -7.76779849337501 24.989361704143278 0.9853223712131346 0.9601430966167225 0.20164607894497155 0.03149100231609309 234.74736641794001 922485.5671510287 0.004758716391406638 0.0066595839330598145 1.706874171277615e-08 7.76779849337501 -0.025179274596412116 RDYDDMS(ph)PR ddPTM_A549_PD325901_60min_R1 25 RDYDDMSPR 9 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDY(0.004)DDMS(0.996)PR;RDYDDMS(1)PR;RDY(0.002)DDMS(0.998)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR 178.46 3.3861e-08 5868315300.0 26131.29 28429.75 26528.719999999998 26873.929999999997 30425.379999999997 30911.489999999998 27903.45 29748.35 30504.699999999997 30498.85700000001 35741.84 True False 28784.119323961055 30825.624806716285 28329.118469352743 28533.871620976686 28288.40627066285 30659.757074111843 28965.331059103715 29154.995822120876 29222.69354195174 28573.153964052497 31345.820266191367 0.9182761554658283 0.9834046308229443 0.9037606363074714 0.9102927082036656 0.9024618284171638 0.9781130885632145 0.9240572048562667 0.9301079242634003 0.932267629106214 0.911545900582816 1.0 14.935985462664371 -10.662754774657767 0.6123496774788431 1.0086259688508301 0.9305322272012411 0.0 0.036578920400918126 0.6990720692269954 0.38924345790189596 0.029797295393913497 0.00533922472352239 2.1739283458309164e-11 10.662754774657767 -0.07809374164958904 RDYDDMSPR ddPTM_A549_MK2206_60min_R1 2 RDYDDMSPR 9 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 62.823 0.0026465 1946700.0 525.59 525.63 511.34 545.33 541.69 378.13 433.53 478.94 696.31 841.19 832.56 False True 614.2967425582254 552.3823218527472 583.8557009619548 678.9358744807937 462.00811857240404 418.14346561762056 512.2967892967847 546.8312116922353 538.5968967785825 651.1645947681727 625.8123745129443 0.9815989065993123 0.8826644284281753 0.9329564654523754 1.084887263549549 0.738253408510777 0.668161069750422 0.8186108331518592 0.8737941817111268 0.8606363803492386 1.0405108963768246 1.0 9.28958637579356 -2.3544368900123196 0.8570388742985517 0.8978744373206771 14.788352563084379 0.04143380411706987 0.1183427684141019 1230.8816003907589 6.230556818215891 0.019138047634869385 33065.53513003452 0.00442143362764107 2.3544368900123196 13.890478125763702 RDYS(ph)YER ddPTM_A549_MK2206_60min_R1 3 RDYSYER 7 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 RDYS(1)YER;RDYS(1)YER;RDY(0.001)S(0.999)YER 131.22 0.0034375 113637000.0 3843.34 4361.85 3542.47 3169.9500000000003 5442.7 4003.6500000000005 3389.98 3658.73 5646.299999999999 6582.5 6229.8 True False 4492.001831358532 4583.849534032312 4044.845513722176 3946.5878923044634 4642.08603990109 4427.313585592218 4005.8954853881287 4177.366181890699 4367.42206528832 5095.508678255206 4682.768726266863 0.9592619439353752 0.9788759176425501 0.8637722147227962 0.8427894100699506 0.9913122580370938 0.9454478417347987 0.8554544799357745 0.8920718545117913 0.9326580748671864 1.088140152998199 1.0 12.193146072281143 -10.110091222489189 0.8279844796173631 0.9955168164437148 0.9164679003874556 0.3786010202620772 0.05565995731247635 0.5631029390938709 0.7665837677431213 0.023238986350664795 0.009894489666575534 7.760840849513009e-11 10.110091222489189 -0.07904891605625919 RDYS(ph)YER ddPTM_A549_PD325901_60min_R1 2 RDYSYER 7 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 RDYS(1)YER;RDYS(1)YER 94.29700000000001 0.0050358 118228000.0 946.4200000000001 798.03 1332.4 1275.75 1202.79 1131.56 1155.35 1086.4499999999998 1191.78 1056.3 1616.29 True False 1042.4998616824203 865.2827887865288 1422.8246763720826 1354.5501800615332 1118.3101798002376 1122.3449505275228 1199.3174764817788 1064.7799024464634 1141.6936311265897 989.6050377307139 1417.4965765064806 0.7354514141062225 0.6104302494465833 1.003758809688792 0.9555932638651705 0.7889332491767925 0.791779655153468 0.8460813919124804 0.7511692938763126 0.8054295509766757 0.6981357515301129 1.0 10.469129535481734 -10.60873881677771 0.8010675555931878 1.0053951312592737 0.81199625455238 0.0 0.13366693877986824 0.6750886919790133 0.7420852073781573 0.08019190341979499 0.019729591397209176 2.461847705864665e-11 10.60873881677771 -0.1933988767068937 REAALPPVS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 REAALPPVSPLK 12 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 REAALPPVS(1)PLK;REAALPPVS(1)PLK 75.574 0.00051436 15234800.0 3435.7 3918.2 3435.0 3735.5 5245.0 3802.5 3893.5 3478.8999999999996 5585.299999999999 4988.0 5772.1 True False 4015.562165199674 4117.619644014675 3922.1346517078987 4650.697667692964 4473.467448009485 4204.878026104782 4600.89855171968 3972.044728684421 4320.238467891338 3861.2073356835504 4338.728268144237 0.9255159385487888 0.9490383793442464 0.9039825518700844 1.0719034196815842 1.0310549938917652 0.969149890528474 1.0604256057011792 0.9154859403959277 0.9957384286108317 0.8899398849274025 1.0 12.083056518552008 -6.234791197392286 24.992749774778698 1.0007762135287928 0.9284648940449087 0.2182593460652612 0.053215358055106396 570.8242354392927 535362.9919527862 0.0053528582349544164 0.014158105133308112 5.82383152004559e-07 6.234791197392286 -0.07231131948388403 REAALPPVS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 REAALPPVSPLK 12 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 REAALPPVS(1)PLK;REAALPPVS(1)PLK 79.771 0.000366 16681700.0 1393.12 1372.06 1321.19 1139.6399999999999 1550.08 1519.27 1403.18 1478.95 1341.59 1664.94 1978.5099999999998 True False 1534.5485168392604 1487.688311444989 1410.8538983608764 1210.032974489771 1441.2077282856965 1506.8975688323626 1456.578782749559 1449.4511820361693 1285.2076378048969 1559.815404259561 1735.1658128082447 0.8843814841854801 0.8573753012326063 0.8130945687994555 0.6973586994152549 0.8305878998118355 0.8684458613171695 0.8394464505914786 0.8353387159526464 0.7406828951550619 0.8989431400421086 1.0 10.760857818293276 -10.934222231812313 1.158654789711242 1.0013176576899996 0.8120824565570026 0.38196737234581957 0.05956104641989291 0.27339470861894954 0.6446951052648449 0.041813091636310494 0.009540753112952091 1.1635304895902446e-11 10.934222231812313 -0.18923520113299697 REASSSS(ph)PEAGEGQIR ddPTM_A549_MK2206_60min_R1 2 REASSSSPEAGEGQIR 16 1 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial 1 REAS(0.213)S(0.213)S(0.171)S(0.402)PEAGEGQIR;REAS(0.184)S(0.184)S(0.15)S(0.481)PEAGEGQIR 46.356 0.012253 14816900.0 1214.69 1017.58 691.61 787.37 1341.48 553.1 963.0 744.1899999999999 1067.8600000000001 1347.68 1451.17 True False 1419.6999756807604 1069.370475564405 789.6906976616295 980.2756853463826 1144.1500690478113 611.6286748819341 1137.9646347260943 849.6812114862911 825.9914150220121 1043.23815199559 1090.804438745495 1.3015165003486047 0.9803503154004942 0.7239525891275541 0.8986722555637667 1.0489048526092062 0.5607134085238523 1.043234327167606 0.7789491693520121 0.7572314391862603 0.9563933872467464 1.0 10.091176760712797 -5.321943517518609 3.361274396466281 0.868363012316467 1.3323806349812783 0.4369432052541289 0.14356218234292542 0.18769049033019286 3.480923022479849 0.019357427199474586 0.20191932143874602 4.764929534097439e-06 5.321943517518609 0.4640176226648114 REASSSS(ph)PEAGEGQIR ddPTM_A549_PD325901_60min_R1 2 REASSSSPEAGEGQIR 16 1 J3QSS7;Q86U28-2;Q86U28 J3QSS7 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial 1 REAS(0.054)S(0.054)S(0.227)S(0.664)PEAGEGQIR;REAS(0.039)S(0.039)S(0.189)S(0.733)PEAGEGQIR 58.693000000000005 0.0027101 17656000.0 929.3599999999999 1095.19 993.3499999999999 947.18 986.71 1241.8200000000002 969.53 1182.1299999999999 1223.69 1207.6100000000001 1019.47 True False 1023.7079430413281 1187.4855048696386 1060.764704498805 1005.6851573981442 917.4068935647064 1231.7070296441088 1006.4259946971729 1158.5514897869543 1172.2625647966024 1131.3612985079885 894.0816529527883 1.1449826083114858 1.3281622555924917 1.186429338970921 1.1248247339342832 1.0260884903911005 1.3776225309805665 1.125653335322738 1.2958005412153684 1.311135913509796 1.2653892346091231 1.0 9.804262782850856 -10.943644397489084 1.215827658460431 1.0005305183970896 1.2213969181505784 0.0 0.12717824861803842 0.38626188440064585 1.0188129036077727 0.07044083567615736 0.016645432271259197 1.1385591622399517e-11 10.943644397489084 0.22086639975348876 REAT(ph)LELLGR ddPTM_A549_MK2206_60min_R1 1 REATLELLGR 10 1 F5H061;P19438-3;P19438-2;P19438 F5H061 TNFRSF1A Tumor necrosis factor receptor superfamily member 1A;Tumor necrosis factor receptor superfamily member 1A, membrane form;Tumor necrosis factor-binding protein 1 1 REAT(1)LELLGR 102.66 0.00024247 1396400.0 194.83 0.0 133.83 0.0 235.14 128.87 0.0 126.27 184.33 144.15 291.45 True False 227.71254086382746 0.0 152.80910638662814 0.0 200.55121748807443 142.50693786301733 0.0 144.1691591856569 142.5795493145239 111.58641488347705 219.07492138920634 1.0394276963325968 0.0 0.6975198503673042 0.0 0.9154458037292964 0.6504940728009707 0.0 0.6580815287822351 0.6508255185504254 0.5093527555590616 1.0 7.7752805309798845 -9.748563951156818 0.6323028362521746 0.9826539049591375 0.46727277682199586 0.011962463669491386 0.37167832350303254 0.6991470230849404 0.5916234318470089 0.16018335837217468 0.07621544068367483 1.7841692449571502e-10 9.748563951156818 -0.5153811281371417 REAT(ph)LELLGR ddPTM_A549_PD325901_60min_R1 2 REATLELLGR 10 1 F5H061;P19438-3;P19438-2;P19438 F5H061 TNFRSF1A Tumor necrosis factor receptor superfamily member 1A;Tumor necrosis factor receptor superfamily member 1A, membrane form;Tumor necrosis factor-binding protein 1 1 REAT(1)LELLGR;REAT(1)LELLGR 94.191 7.6553e-05 1723400.0 149.28 151.94 161.66 301.83 271.32 99.29299999999999 230.54 187.51 259.87 151.39 263.79 True False 164.4347957058723 164.74451703347637 172.63121974055156 320.47335359433464 252.26341920318643 98.48439072848919 239.3133258563286 183.76996595125064 248.94856762226806 141.83120956362097 231.3455023025848 0.7107758485436312 0.7121146311200004 0.7462052126466725 1.3852586300777805 1.0904185155639738 0.42570263847048145 1.0344412295654764 0.794352879663472 1.0760899396983288 0.6130709616222191 1.0 7.853905240833404 -8.768970550174823 24.813567805567992 1.0359313669758787 0.8697316525935337 0.0 0.26824807392881794 291.19759297595516 959429.6207009533 0.04120323318612457 0.044283751480199106 1.7022739369169355e-09 8.768970550174823 -0.16619971438234504 REDEGEPGDEGQLEDEGS(ph)QEK ddPTM_A549_MK2206_60min_R1 2 REDEGEPGDEGQLEDEGSQEK 21 1 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 REDEGEPGDEGQLEDEGS(1)QEK;REDEGEPGDEGQLEDEGS(1)QEK 64.028 0.00064994 13245500.0 216.51 130.73 0.0 162.86 488.77 146.37 366.36 293.58 447.94 381.03999999999996 466.29 True False 253.0515948387173 137.3835986070232 0.0 202.7607073110633 416.87258046970373 161.8587762474574 432.92286975934815 335.1958640510427 346.4823052131928 294.9627993562268 350.49732405068767 0.721978678508033 0.39196761053489604 0.0 0.5784943090799197 1.1893745026407594 0.4617974664595441 1.235167403722433 0.9563435754007864 0.988544794604725 0.8415550679455982 1.0 8.453259619478413 -6.5785844404217535 5.703357173326352 0.9789877216097449 0.3594896493198687 0.52868820582247 0.24505341829017835 0.09514925603254937 6.49734879056121 0.03160215367645984 0.066977980366835 2.638855196552239e-07 6.5785844404217535 -0.6194980722898762 REDEGEPGDEGQLEDEGS(ph)QEK ddPTM_A549_PD325901_60min_R1 2 REDEGEPGDEGQLEDEGSQEK 21 1 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 REDEGEPGDEGQLEDEGS(1)QEK;REDEGEPGDEGQLEDEGS(1)QEK 91.72200000000001 9.731100000000001e-07 14375000.0 441.32 453.95 401.82 356.22 502.19 661.0 425.5 229.19 450.53 607.3599999999999 452.38 True False 486.12248151738703 492.2059596376636 429.08992153995086 378.22290036568234 466.91790686144833 655.6170351538519 441.6926353425343 224.6186256539232 431.595790860278 569.011185947294 396.7401278730933 1.2252919414112928 1.2406256011368413 1.0815390009583437 0.9533265575965784 1.176886011920637 1.6525100162380513 1.1133046654756842 0.5661605919675783 1.0878551488452766 1.4342163697877965 1.0 8.632050514547272 -8.00168242243287 24.999651860477094 0.9990318947014942 1.2170303646548244 0.12410432638615998 0.24576971707079898 85.70154163896564 1273489.5682960963 0.033469402956495 0.045881131311613296 9.961335731370779e-09 8.00168242243287 0.21799846995333017 REDEGEPGDEGQLEDEGS(ph)QEKQGR ddPTM_A549_MK2206_60min_R1 2 REDEGEPGDEGQLEDEGSQEKQGR 24 2 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 REDEGEPGDEGQLEDEGS(1)QEKQGR;REDEGEPGDEGQLEDEGS(1)QEKQGR 63.803000000000004 7.072300000000001e-05 4707500.0 982.25 1069.1599999999999 735.5899999999999 743.94 1140.26 599.71 657.8599999999999 720.6500000000001 1017.49 1068.06 1464.8400000000001 True False 1148.0297862931507 1123.5756772484124 839.9077229839329 926.2053333967353 972.5292644932883 663.1709141447204 777.3846465222313 822.8043443980649 787.0301395976503 826.7845042001143 1101.0798004726873 1.0426399483491642 1.020430741501268 0.7628036792822511 0.8411791161722526 0.8832504820048347 0.6022914178064341 0.7060202595565774 0.7472704013322555 0.7147802904564979 0.7508851800252628 1.0 10.104703316302043 -5.748555826693263 23.165919374190658 0.82124172237843 1.0315358316089884 0.41827096865980284 0.1056709315289661 97.19139956707907 174750.97621870434 0.01863494168550123 0.07104221475560803 1.7842026222027676e-06 5.748555826693263 0.21029410923055847 REDEGEPGDEGQLEDEGS(ph)QEKQGR ddPTM_A549_PD325901_60min_R1 1 REDEGEPGDEGQLEDEGSQEKQGR 24 2 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 REDEGEPGDEGQLEDEGS(1)QEKQGR 55.158 0.00092007 4351800.0 464.63 502.71 580.89 493.97 741.51 799.01 501.81 406.08 453.82 713.08 761.49 True False 511.7988955574722 545.0751359608986 620.312688575337 524.4814050127341 689.4288956706275 792.5031274709208 520.9066541509684 397.9804158364025 434.74752360156117 668.0560071050061 667.8315574828287 0.7663592560473329 0.8161865516139728 0.9288460265540635 0.785349837299684 1.032339499303092 1.1866811602284872 0.7799970641015448 0.5959293348407475 0.6509837978309964 1.000336087175969 1.0 9.383340457401996 REDFQDISVPVQEDELSKVEES(ph)SEISPEPK ddPTM_A549_MK2206_60min_R1 1 REDFQDISVPVQEDELSKVEESSEISPEPK 30 2 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 REDFQDISVPVQEDELS(0.1)KVEES(0.469)S(0.063)EIS(0.368)PEPK 123.95 8.9759e-22 40365000.0 700.53 873.36 961.69 794.0 918.91 837.2 788.51 1056.4 1336.5 1446.4 1212.3 True False 818.7623376858646 917.8102935778305 1098.0721028241533 988.5300356440141 783.7395562727161 925.7919483116169 931.772060361239 1206.147935089316 1033.7848839519404 1119.6572354315733 911.2524522221123 0.8985022050577661 1.0071965143574941 1.2050141540321526 1.0848037042133147 0.8600685291562697 1.0159555083270828 1.0225180278956607 1.32361557123725 1.1344659555439656 1.228701478609205 1.0 9.831706981577998 -8.04350836766378 24.997804887899314 1.0889849224213612 1.0170904468950652 0.18198552678036506 0.12183361788211723 1036.6310740497904 595595.9647278431 0.020077704232207245 0.02592111404585167 9.046730070020738e-09 8.04350836766378 -0.07189447552629602 REDFQDISVPVQEDELSKVEESSEIS(ph)PEPK ddPTM_A549_MK2206_60min_R1 1 REDFQDISVPVQEDELSKVEESSEISPEPK 30 2 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 REDFQDISVPVQEDELS(0.03)KVEES(0.008)S(0.05)EIS(0.911)PEPK 163.72 5.611399999999999e-47 36741000.0 1237.5 1207.6 903.34 905.57 1614.8 1357.0 1422.6 1069.4 1353.4 1462.5 1923.9 True False 1446.3597460298026 1269.0616819233633 1031.4471954217797 1127.4346906525827 1377.2650591126253 1500.5968392963027 1681.0680055673333 1220.9907249001467 1046.857060935694 1132.1202342496376 1446.1425330612246 1.0001502016320052 0.8775495173611878 0.7132403423875452 0.779615193438786 0.9523715869121158 1.0376548680300608 1.1624497358561285 0.8443087019337769 0.7238961838150803 0.7828552223363087 1.0 10.497994037232333 -5.258982497118042 21.90502920563999 0.8847084599628084 1.0001503979133468 0.0551539487921594 0.13374576692146503 114.37431768073984 1019315.9098352456 0.020765695937330374 0.18978094477255422 5.508298954357054e-06 5.258982497118042 0.11544193795053836 REDFQDISVPVQEDELSKVEESSEIS(ph)PEPK ddPTM_A549_PD325901_60min_R1 2 REDFQDISVPVQEDELSKVEESSEISPEPK 30 2 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 REDFQDISVPVQEDELS(0.001)KVEES(0.327)S(0.048)EIS(0.625)PEPK;REDFQDISVPVQEDELSKVEES(0.006)S(0.001)EIS(0.993)PEPK 188.34 1.8279999999999998e-67 219630000.0 3664.7 3041.3999999999996 3049.7 3269.7 3757.1 3697.7 3631.1000000000004 3118.0 3769.8999999999996 3984.2999999999997 4071.9 True False 4036.73764619045 3297.709451794229 3256.6709813358884 3471.661942972522 3493.214257291361 3667.5871571685293 3769.283497514161 3055.80904397632 3611.464213180393 3732.7306180351075 3571.0821139008117 1.130396198529579 0.9234482284676538 0.911956341933151 0.9721596514005415 0.9781948848763958 1.0270240336653311 1.0555017715335724 0.8557095430769466 1.0113080847741893 1.0452659723239244 1.0 11.802145592474465 -7.034967504142902 22.980483376707596 0.9986936383923818 0.9749774931721366 0.006184248585860086 0.07235888132692159 847.7186855121267 557116.4837063497 0.009949531629544062 0.017240645256083334 9.226404606611665e-08 7.034967504142902 -0.023716145220245233 REDIFYTSK ddPTM_A549_MK2206_60min_R1 2 REDIFYTSK 9 1 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 69.979 0.0038025999999999997 83640000.0 6333.2 5479.5 5489.9 5861.8 7544.7 5798.200000000001 5694.200000000001 5763.200000000001 8459.0 8000.6 7733.7 False True 7402.08932812602 5758.383145163184 6268.45037100762 7297.9412631462055 6434.884624403656 6411.761675466341 6728.762433081344 6580.151249059774 6543.0500062472565 6193.25890334198 5813.208850738391 1.2733224486138683 0.9905687707111636 1.0783115714501472 1.2554066868282607 1.1069419299439585 1.1029642732777305 1.1574953878057657 1.1319309899254637 1.1255487587403918 1.065376982379588 1.0 12.505119025764479 -10.538698297919643 0.6327799269005057 0.988946632755648 1.134134081501019 0.19727137154333174 0.07624573075072212 0.8846794683465913 0.5682794896914497 0.06954294014519449 0.014937621495572932 2.8926887200797047e-11 10.538698297919643 0.14518744874537104 REDIFYTSK ddPTM_A549_PD325901_60min_R1 2 REDIFYTSK 9 1 S4R3Z2;A0A0A0MSS8;P42330;S4R3D5;P17516;A6NHU4;B4DK69;P52895;S4R3P0;P52895-2;Q04828;H0Y804 S4R3Z2;B4DK69;Q04828 AKR1C3;AKR1C4;AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 113.93 0.00022691 145327000.0 4646.0 4660.0 4726.200000000001 4828.7 5668.4 5294.1 4597.7 4508.5 5145.299999999999 4926.6 5449.5 False True 5117.658499795571 5052.714554271425 5046.948352949368 5126.957832226632 5270.271138918406 5250.98660485326 4772.667989457977 4418.574430650174 4929.0609342627295 4615.533635221186 4779.2460472267185 1.0708087529339956 1.0572200100899585 1.0560135015182972 1.0727545268780798 1.1027411200092152 1.0987060622041591 0.9986236201895152 0.924533783569098 1.031346970956422 0.9657451383779392 1.0 12.222567327612916 -7.769474951942071 24.999759541318465 1.0058693472084645 1.075611868246896 0.6550883321130925 0.03160037102803204 107.69889240191111 335065.30129217415 0.005035239385261757 0.007022143863613013 1.7002980159867546e-08 7.769474951942071 0.06974252103843148 REDLFIVSK ddPTM_A549_MK2206_60min_R1 2 REDLFIVSK 9 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 106.62 0.00052481 90815000.0 2017.82 2173.4 2152.4 2190.83 3244.0 2447.8 2387.7 2350.45 3665.0 3156.8999999999996 2705.8 False True 2358.3786850374613 2284.0167766580294 2457.642685396238 2727.583448350096 2766.811897300815 2706.824571281865 2821.51418311059 2683.6334854512343 2834.8833518023657 2443.7540974377284 2033.8751837190412 1.1595493685728784 1.1229876813195547 1.208354723568787 1.3410771074764654 1.360364647471416 1.3308705435563173 1.387260243743823 1.3194681300668991 1.3938334930753429 1.2015260901945828 1.0 10.990015430251386 -10.875923363818478 1.1120432509753704 0.9991976825298271 1.2995783435051522 0.27070402078857947 0.10355717525074817 0.30147561173554555 0.6590301442974821 0.07012136369876591 0.016734155087059548 1.3306892124485333e-11 10.875923363818478 0.3003806609753251 REDLFIVSK ddPTM_A549_PD325901_60min_R1 4 REDLFIVSK 9 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ;;; 135.8 4.5528e-05 200728900.0 13011.98 13617.5 14272.33 15328.4 18764.97 17879.16 16304.060000000001 16315.14 18269.71 16662.36 16615.81 False True 14332.946630686602 14765.094515620407 15240.936140292371 16275.200454677788 17446.98324283215 17733.5580487766 16924.519925223976 15989.721733720266 17501.897623327914 15610.295745983853 14572.170706297853 0.9835834975836604 1.0132391949841197 1.0458933296537274 1.1168686383589999 1.197281008744418 1.2169469055912476 1.1614275090745043 1.0972779591999817 1.2010494507701506 1.0712402469480637 1.0 13.83092818035264 -6.036863249602669 2.4859444729157767 1.1189245197771631 0.9973544216775099 0.42393364081176366 0.06151154114221035 0.32645146635528355 3.9397849387952015 0.012147630980407154 0.0437451779755888 9.186218060554484e-07 6.036863249602669 -0.12157009809965325 REDLVVAPAGITLK ddPTM_A549_MK2206_60min_R1 1 REDLVVAPAGITLK 14 1 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 57.803999999999995 0.010768000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 REDLVVAPAGITLK ddPTM_A549_PD325901_60min_R1 1 REDLVVAPAGITLK 14 1 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 66.965 0.0025153000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 REDPS(ph)FERYPK ddPTM_A549_PD325901_60min_R1 2 REDPSFERYPK 11 2 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 REDPS(1)FERYPK;REDPS(1)FERYPK 81.703 0.00015651 24886000.0 6014.5 5961.6 5869.5 5918.6 6140.5 6052.6 6266.4 6343.6 6016.0 7275.0 7082.2 True False 6625.087612359116 6464.004954237017 6267.839566170773 6284.178479884136 5709.212463574992 6003.309632333138 6504.871281105652 6217.0719215420695 5763.168441203545 6815.655258440732 6211.134297764759 1.0666469753750663 1.0407124760711195 1.0091296155722185 1.01176020008868 0.9191899884743441 0.9665399819954928 1.0472920032411153 1.0009559644813102 0.9278769649655737 1.0973285927650165 1.0 12.600641046879899 -5.9077566154909755 1.2994361888717765 0.9719621746349488 1.0672961333719926 0.04236070307187223 0.05126500570455742 0.4668627972979203 1.265951066056391 0.005956695761572139 0.04301473260784351 1.236640269242989e-06 5.9077566154909755 0.09533395873704376 REDRPIS(ph)FYQLGSNQLQSNAVSLAR ddPTM_A549_MK2206_60min_R1 2 REDRPISFYQLGSNQLQSNAVSLAR 25 2 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 REDRPIS(0.955)FY(0.001)QLGS(0.044)NQLQSNAVSLAR;REDRPIS(1)FYQLGSNQLQSNAVSLAR 91.113 4.6334e-09 6366400.0 1027.85 1636.4499999999998 1278.4 1247.74 1632.53 886.4300000000001 1354.9 1505.9 2300.0 1570.58 1776.22 True False 1201.325951480188 1719.7383151569118 1459.6963431567326 1553.4363560131767 1392.3869995994135 980.2314342353878 1601.0677918903289 1719.365936625333 1779.0536723452765 1215.784887184817 1335.1355528218762 0.8997782651665032 1.2880627075821314 1.093294489890252 1.1635045990123705 1.0428806248598006 0.7341812089144202 1.199179954804133 1.287783800672049 1.3324891757882988 0.9106078290067211 1.0 10.382770507066411 REDRPIS(ph)FYQLGSNQLQSNAVSLAR ddPTM_A549_PD325901_60min_R1 3 REDRPISFYQLGSNQLQSNAVSLAR 25 2 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 REDRPIS(1)FYQLGSNQLQSNAVSLAR;REDRPIS(0.997)FYQLGS(0.003)NQLQSNAVSLAR;REDRPIS(0.996)FYQLGS(0.004)NQLQSNAVSLAR 102.6 1.8385e-12 13213600.0 3993.17 4973.3 5029.65 4127.2 4750.200000000001 4412.6900000000005 4925.0 5352.42 5267.2 5384.9 5066.200000000001 True False 4398.5536787836145 5392.417444797868 5370.992294742456 4382.127770448724 4416.5623393003725 4376.754515662708 5112.423570063408 5245.661784207737 5045.837901181404 5044.896495007217 4443.089517287825 0.9899763805498574 1.2136639209757665 1.2088417921458052 0.9862794241255094 0.9940295648142499 0.9850700731175883 1.1506460876314195 1.180633827834696 1.1356597434168987 1.1354478624339646 1.0 12.117347493047191 -10.909332381853368 1.2146707346353542 1.0010351346791688 1.0988880096710005 0.0 0.09603587879122215 0.7698483976032261 2.0515391516000587 0.06108058578160279 0.015173582451751513 1.2321614529059053e-11 10.909332381853368 0.0978528749918317 REDS(ph)APPSSVAR ddPTM_A549_MK2206_60min_R1 3 REDSAPPSSVAR 12 1 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 REDS(1)APPSSVAR;REDS(0.999)APPS(0.001)SVAR;REDS(0.783)APPS(0.109)S(0.109)VAR 102.72 8.631200000000001e-05 36422000.0 3152.4 2888.6 2757.6 2867.0 4111.7 2724.3 3216.1 2987.8 4507.7 4449.1 4321.4 True False 3684.448051219676 3035.617401791838 3148.669145720436 3569.4151287045224 3506.8743767360547 3012.5836177560195 3800.423740127306 3411.3297997537484 3486.7131473177405 3444.045219965855 3248.2771154274005 1.1342776248124646 0.9345315359254436 0.9693351379308479 1.0988641060677693 1.0796105911285923 0.9274404586505333 1.1699813793834075 1.0501966668890237 1.0734038456133899 1.0602682891828012 1.0 11.665459000928681 -6.244183885140191 24.521354671067833 1.0451210371244344 1.004896455106031 0.047447554243193135 0.07358545848517196 1618.8405720071933 2300490.7508315193 0.009776173949685238 0.025770662036276423 5.699229094533955e-07 6.244183885140191 -0.04022458201840329 REDS(ph)APPSSVAR ddPTM_A549_PD325901_60min_R1 3 REDSAPPSSVAR 12 1 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 REDS(1)APPSSVAR;REDS(0.963)APPS(0.019)S(0.019)VAR;REDS(1)APPSSVAR 106.3 6.223100000000001e-05 46439000.0 4103.5 4493.5 4534.5 4346.0 5047.9 4413.4 4169.3 4101.3 4419.2 4959.700000000001 5233.1 True False 4520.084299162964 4872.183014939624 4842.238438163621 4614.442549517867 4693.352918309617 4377.458733658108 4327.964993028504 4019.4963540923895 4233.476392181964 4646.543695572301 4589.461875354092 0.9848832873928657 1.061602241671028 1.0550776037964205 1.0054430508068766 1.0226368680636464 0.9538065360484933 0.943022321695305 0.875809945317886 0.9224341561515504 1.0124375845727676 1.0 12.164109289004738 -7.236478027913742 4.077591487809558 0.9527442899267212 1.0293957408213734 0.4716784641678823 0.03930333466728275 0.1702821966393475 6.567895191500375 0.006494469527325104 0.011216611304526627 5.8012552183774625e-08 7.236478027913742 0.0766514508946522 REDS(ph)MEDRGEEDDSLAIKPPQQMSR ddPTM_A549_MK2206_60min_R1 1 REDSMEDRGEEDDSLAIKPPQQMSR 25 3 P21127;P21127-8;P21127-2;P21127-3;P21127-9;P21127-6;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;Q9UQ88-9;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 REDS(1)MEDRGEEDDSLAIKPPQQMSR 80.79 4.7553999999999993e-07 22349000.0 1742.5 2042.6 1478.0 1450.7 2097.4 1766.7 1870.9 1516.5 2699.5 2386.7 2149.4 True False 2036.5913999651966 2146.559615350001 1687.6026245194382 1806.1215651243967 1788.8752384089798 1953.6510213594534 2210.8183126781432 1731.4685190864711 2088.0675602156834 1847.5428123648605 1615.6446595778355 1.2605441350558815 1.3286087399384543 1.0445382371148402 1.1178952961082003 1.1072207170086579 1.2092083551775168 1.3683815309090461 1.0716889439902584 1.2924052005106688 1.143532893456671 1.0 10.657894215279066 -10.96899305021586 1.20286303759438 0.9986343095776713 1.204900155838676 0.12596191830129078 0.10931636453444978 0.4394182787935134 1.1181055473559314 0.07554762036334049 0.01697961842741133 1.0740065989614247e-11 10.96899305021586 0.20626584626100475 REDS(ph)MEDRGEEDDSLAIKPPQQMSR ddPTM_A549_PD325901_60min_R1 1 REDSMEDRGEEDDSLAIKPPQQMSR 25 3 P21127;P21127-8;P21127-2;P21127-3;P21127-9;P21127-6;A0A087X1I0;A0A087WYI9;J3KS35;E7ESP2;Q9UQ88-9;E9PFJ2;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 REDS(1)MEDRGEEDDSLAIKPPQQMSR 70.98 1.1103e-05 27049000.0 4438.8 4325.7 4913.0 4156.6 5423.2 4263.5 3684.6 5037.1 4872.6 4026.2 5145.9 True False 4889.4237083281505 4690.241920045468 5246.425724269023 4413.34374167648 5042.293141024327 4228.779469558921 3824.819469290486 4936.631088971493 4667.821566922938 3771.9850448844095 4512.986922547752 1.083411893772536 1.0392766477146467 1.1625173780267053 0.9779207911342628 1.1172851212646018 0.937024534334705 0.8475139713303734 1.0938722344412595 1.0343086844771479 0.8358067748964317 1.0 12.139866882666766 -7.249383567814784 24.979094024073568 1.0040453062816828 1.0733861262858906 0.22593734905608853 0.08870188541413897 1052.6461061516309 2181035.603611051 0.010616306003270664 0.01829332094154585 5.631400722037771e-08 7.249383567814784 0.06934082000420783 REDS(ph)PGPEVQPMDK ddPTM_A549_MK2206_60min_R1 6 REDSPGPEVQPMDK 14 1 O75382-3;O75382-2;O75382;E9PMW5;E9PMK8 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK 158.71 1.9067e-19 161363400.0 15709.5 16730.3 14556.080000000002 14969.16 19803.4 15211.6 15562.259999999998 15130.8 21567.5 24157.4 25284.9 True False 18360.879539600148 17581.800809110995 16620.35102213459 18636.60487199112 16890.346093405355 16821.28141535713 18389.721200843735 17275.6372361316 16682.495686220333 18700.226561957046 19005.961502260896 0.9660589672043685 0.9250676850534246 0.8744809369500974 0.9805662749434781 0.8886867465976992 0.8850529037089819 0.9675764732374179 0.9089588671468443 0.8777506828179058 0.9839137346317638 1.0 14.214164391829321 -10.972862945093558 1.2384838283923285 1.0000499398179648 0.9151583686067044 0.3657323311860241 0.036425262159540096 0.35519519552716067 0.968062648399753 0.02543906294826399 0.005856973791460792 1.0644788940951575e-11 10.972862945093558 -0.08489157121126034 REDS(ph)PGPEVQPMDK ddPTM_A549_PD325901_60min_R1 2 REDSPGPEVQPMDK 14 1 O75382-3;O75382-2;O75382;E9PMW5;E9PMK8 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 REDS(1)PGPEVQPMDK;REDS(1)PGPEVQPMDK 97.384 1.1300999999999999e-05 117090000.0 10386.8 10316.900000000001 9775.0 10556.3 11969.8 10354.3 11571.5 10780.9 12343.4 11447.9 11655.5 True False 11441.260289641978 11186.341370163704 10438.390281850121 11208.338675903233 11129.082541568258 10269.978013757218 12011.859764667763 10565.866492047557 11824.649823329757 10725.077640289162 10221.94739030205 1.1192838167506844 1.0943454258800638 1.021174330417061 1.0964973940813871 1.0887438681328805 1.004698774276684 1.1751048314007047 1.0336451645282185 1.1567903230012955 1.0492205869171711 1.0 13.31938245084411 -11.10674042422684 1.460340828742935 1.0001851552571832 1.0943918929885723 0.15034352054857092 0.05237742485269107 0.3988728864783049 1.525982620673177 0.03613774511195792 0.007923664948674764 7.820951195000512e-12 11.10674042422684 0.0942067377313891 REDS(ph)REK ddPTM_A549_PD325901_60min_R1 1 REDSREK 7 2 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 REDS(1)REK 68.557 0.0074456999999999995 11207000.0 1632.5 1903.8 1608.5 1283.6 1881.8 1817.7 940.44 1417.5 1555.2 1905.1 2228.2 True False 1798.2301982170186 2064.239907386681 1717.6624826962593 1362.8850567328886 1749.62885985757 1802.897253856514 976.228958828514 1389.2268504927624 1489.8403523536822 1784.8116608736004 1954.145525723565 0.9202130417340257 1.0563388858270168 0.8789839139847363 0.6974327340479163 0.895342151762076 0.9226013263208491 0.4995681979554946 0.7109126890528641 0.7623998994660525 0.9133463385295908 1.0 10.932322193842504 -5.9351466989530035 6.943183958357805 0.8363599924995327 0.9856343340381384 0.18710253745275163 0.13714031326888215 0.3461818547637424 29.95068881536787 0.021694997628407174 0.06832241010042979 1.1610563580569052e-06 5.9351466989530035 0.14927434153860564 REDS(ph)YHVR ddPTM_A549_MK2206_60min_R1 2 REDSYHVR 8 1 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 REDS(1)YHVR;REDS(1)YHVR 134.84 0.00044502 92754000.0 3569.3999999999996 3101.7 2708.2 2914.2 4331.7 3547.7 3270.0 3162.8 5040.4 4210.5 4540.6 True False 4171.827456548507 3259.563281568147 3092.2634828982023 3628.179130823408 3694.5126681682905 3923.115259227333 3864.116672434403 3611.1365856687726 3898.7574478648376 3259.3451256807516 3413.0437058151647 1.2223187911249194 0.9550312162761008 0.906013444137731 1.06303330503553 1.0824686076751837 1.1494477063223965 1.1321614973317504 1.0580399481893819 1.1423110232142972 0.9549672979948834 1.0 11.736843173684003 -6.503962062460875 24.29437303576973 1.0798722800151492 1.014514029717059 0.03925409466520402 0.09166695010382238 1010.673010499263 1297987.9622442806 0.01249218039324976 0.028572290627208258 3.133559442602906e-07 6.503962062460875 -0.06535825029809028 REDS(ph)YHVR ddPTM_A549_PD325901_60min_R1 2 REDSYHVR 8 1 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 REDS(1)YHVR;REDS(1)YHVR 132.25 0.00044957 121271000.0 3022.8999999999996 3098.7 3181.8999999999996 3136.9 3941.0 3346.8999999999996 3325.6000000000004 3310.8 3513.7 3843.0 3547.5 True False 3329.782582658637 3359.8383238885945 3397.842868319072 3330.659188583204 3664.197755711917 3319.643956061158 3452.157527838147 3244.763496727643 3366.031408220891 3600.3523241495163 3111.179989455323 1.0702635636460187 1.079924123733132 1.0921395997130772 1.0705453235980429 1.1777517752527753 1.0670047915300236 1.1095974966213766 1.0429366053153701 1.0819147139121916 1.157230483723905 1.0 11.603246145424189 -10.614153273884249 0.4481280048553602 0.9797951108111007 1.0944019423213378 0.0 0.05673313484340995 1.0542033216248734 0.2907061168801826 0.05430852878204635 0.008567770018853874 2.4313457721061324e-11 10.614153273884249 0.1146068315102371 REEDEENDNDNES(ph)DHDEADS ddPTM_A549_MK2206_60min_R1 7 REEDEENDNDNESDHDEADS 20 1 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(0.999)DHDEADS(0.001);REEDEENDNDNES(0.999)DHDEADS(0.001) 231.44 7.476199999999999e-76 394453650.0 2046.5100000000002 2118.79 1806.6100000000001 1602.31 3496.5799999999995 2135.2 2048.2799999999997 2127.63 2067.81 3775.58 2684.17 True False 2391.9108556343044 2226.6273609161985 2062.8144637909754 1994.8760219304293 2982.2377138915185 2361.1454467689487 2420.425962634231 2429.228068093604 1599.4543366140367 2922.673855745807 2017.61650967667 1.1855131260883747 1.1035929524947352 1.022401657548663 0.9887290336705835 1.4780993809222114 1.1702647333845075 1.1996461919426464 1.2040088175541825 0.7927444729674397 1.44857748820373 1.0 10.978436270720005 -8.75166357733877 24.99471559622521 0.9021293328620178 1.1673167451638042 0.0 0.2081129930721759 138.84156014653885 354988.9977985591 0.023751615396601172 0.026769126833125753 1.7714806899471367e-09 8.75166357733877 0.26518741230178644 REEDEENDNDNES(ph)DHDEADS ddPTM_A549_PD325901_60min_R1 11 REEDEENDNDNESDHDEADS 20 1 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(0.992)DHDEADS(0.008);REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(0.999)DHDEADS(0.001);REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS 244.98 3.750299999999999e-86 894916600.0 5078.35 4316.78 4569.4 4998.45 5549.23 4202.18 5060.11 4468.84 5033.3099999999995 4982.55 5749.090000000001 True False 5593.900353516322 4680.570200340728 4879.506962034367 5307.19290419641 5159.471228604227 4167.958839308341 5252.675255048438 4379.705480462838 4821.777484507016 4667.950942672697 5041.988376484198 1.1094631593373436 0.9283183242093294 0.9677743377577696 1.0525991945854387 1.023300897056401 0.82664983099677 1.0417864665350842 0.868646484964098 0.956324593486918 0.9258154906591992 1.0 12.299777076954546 -5.25016333746742 24.265127080265422 0.970653539345749 1.1094632829975828 0.27538899796600114 0.06780103398889559 1106.6690814679932 2381392.746676527 0.008423487177451602 0.17599137635686535 5.621298692743994e-06 5.25016333746742 0.13880974365183374 REEDEPEERS(ph)GDET(ph)PGSEVPGDK ddPTM_A549_MK2206_60min_R1 1 REEDEPEERSGDETPGSEVPGDK 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 REEDEPEERS(0.969)GDET(0.888)PGS(0.143)EVPGDK 46.847 0.0063763000000000005 7863300.0 685.7 719.24 571.65 415.24 978.56 619.65 581.01 827.51 667.3 728.02 453.43 True False 801.4293962445548 755.8462438775748 652.7185658366286 516.9738186408323 834.6151202905934 685.2209517096194 686.5719962847436 944.8120766430898 516.157615459132 563.5597763681512 340.8308169686319 2.3513994519994177 2.2176581642473328 1.9150808358291764 1.5168047984593236 2.448766598377771 2.0104430632300576 2.0144070374596783 2.772085238788853 1.514410052617502 1.6534883241500373 1.0 8.412911975684159 -9.024369071025642 3.4965918296204386 1.2057573595811508 2.1306478732115908 0.477778638919396 0.3468493589920583 0.10719925253903839 2.7299262209518833 0.06211045077372042 0.062464814437973484 9.454333741064805e-10 9.024369071025642 0.92489051363044 REEDEPEERS(ph)GDET(ph)PGSEVPGDK ddPTM_A549_PD325901_60min_R1 1 REEDEPEERSGDETPGSEVPGDK 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 REEDEPEERS(0.997)GDET(0.951)PGS(0.052)EVPGDK 83.944 1.3852e-05 7814000.0 947.51 852.22 697.63 931.62 1064.0 946.47 961.62 1086.5 1236.3 666.25 972.85 True False 1043.7005176800046 924.0395702663501 744.9753669899849 989.1640515374683 989.2683106007305 938.7622621211283 998.2149753186551 1064.8289051572385 1184.342610349059 624.1828612970636 853.1956174042598 1.2232839648840814 1.0830336577180555 0.8731589236903005 1.1593637278012225 1.1594859261120618 1.100289597099894 1.1699719911309419 1.248047790490118 1.3881255203258922 0.7315823576263335 1.0 9.736732744804616 -7.058188021392473 1.3060571340592568 1.1900901249984028 1.0694712951151872 0.0 0.18192161524459668 0.8427465320301726 2.83403296430014 0.02560825118193939 0.05841113002032248 8.746050458917302e-08 7.058188021392473 -0.1206188298832156 REEDEPEERS(ph)GDET(ph)PGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_MK2206_60min_R1 1 REEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEK 36 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 REEDEPEERS(0.98)GDET(0.548)PGS(0.472)EVPGDKAAEEQGDDQDSEK 59.67 0.00038831 11821000.0 294.0 348.85 600.46 371.77 574.01 482.41 179.11 310.48 651.19 420.79 671.73 True False 343.6200123901106 366.6049749411768 685.6142570493522 462.8536666893893 489.57388938644885 533.4583060021583 211.65196856260732 354.49149080512206 503.696504736748 325.73324674865285 504.9209021951328 0.6805422609684606 0.7260641683625486 1.357864675573261 0.9166854940588574 0.9696051148962875 1.0565185629728533 0.4191784646713078 0.7020733133922124 0.9975750707624467 0.645117374488825 1.0 8.979913591602404 -8.921823999886694 24.999927681046962 0.9989374150454875 0.8634731260626332 0.0 0.25167934773483824 74.29711820990823 23756.16511137799 0.04059558278515457 0.043217196165709536 1.1972256149599076e-09 8.921823999886694 -0.13546428898285434 REEDEPEERS(ph)GDET(ph)PGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_PD325901_60min_R1 2 REEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEK 36 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 REEDEPEERS(0.986)GDET(0.547)PGS(0.461)EVPGDKAAEEQGDDQDS(0.007)EK;REEDEPEERS(0.866)GDET(0.614)PGS(0.519)EVPGDKAAEEQGDDQDSEK 67.505 0.00015737 34411000.0 1016.0699999999999 1239.1399999999999 898.4200000000001 1251.46 1829.07 1211.71 852.99 923.5799999999999 1076.74 990.85 1231.31 True False 1119.2206784088003 1343.5666765622084 959.3921838383419 1328.759841928125 1700.6024331489473 1201.8422355011694 885.4510012240378 905.1584723655062 1031.488362264213 928.2875619004814 1079.866675917191 1.0364433900677448 1.2441968129269683 0.8884357719655314 1.230485088170292 1.5748262920554805 1.1129542769531042 0.8199632611794181 0.8382131725629042 0.9551997346228991 0.8596316402782176 1.0 10.076637487915217 -7.534841038608091 22.13026470273217 0.9552010821205517 1.1987029568138854 0.40502892176165595 0.16794434997976204 51.243599723078816 94799.9540172633 0.02567643945514251 0.03811237246750531 2.9184950523058555e-08 7.534841038608091 0.24350187469333373 REEDEPEERS(ph)GDETPGS(ph)EVPGDK ddPTM_A549_PD325901_60min_R1 1 REEDEPEERSGDETPGSEVPGDK 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 REEDEPEERS(0.803)GDET(0.248)PGS(0.95)EVPGDK 42.347 0.021276 17123000.0 614.08 697.88 400.1 474.61 593.19 405.19 311.16 541.93 479.48 621.81 660.4 True False 676.4209495381971 756.6927968100734 427.2531919967505 503.9255817824838 551.5263807944059 401.8902669803165 323.0013640732854 531.1207810141395 459.3291230366149 582.5488104812417 579.1749866205204 1.1679042865526805 1.3065011685421146 0.7376927558452898 0.8700748364891999 0.9522620857861218 0.6939012841789693 0.5576921854964676 0.9170299016420295 0.7930748627747121 1.0058252237038199 1.0 9.177855486502171 -5.756785617244647 24.997051225918685 0.8575377790613418 1.2372028414805367 0.5644249090903093 0.13475941978518646 67.15208933395348 360684.7445826382 0.019627995022929855 0.07128391030326146 1.75071068661612e-06 5.756785617244647 0.37966506241919495 REEDEPEERS(ph)GDETPGSEVPGDK ddPTM_A549_MK2206_60min_R1 4 REEDEPEERSGDETPGSEVPGDK 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(1)GDETPGSEVPGDK;REEDEPEERS(1)GDETPGSEVPGDK;REEDEPEERS(1)GDETPGSEVPGDK;REEDEPEERS(0.999)GDET(0.001)PGSEVPGDK 247.62 6.547499999999999e-100 1348690000.0 21725.600000000002 21484.100000000002 18089.100000000002 18457.5 25995.8 19674.0 20002.1 21480.7 24346.300000000003 27526.4 26006.6 True False 25392.350140076855 22577.548923989503 20654.40638375817 22979.58832858866 22171.852256428036 21755.889621455757 23636.222658623912 24525.65500688477 18831.9019230521 21308.16712208494 19548.44347435419 1.2989448583663117 1.154953792285776 1.0565754972182264 1.1755201051549615 1.134200392246857 1.1129218369737488 1.2091102132828389 1.25460909657898 0.9633453398864146 1.090018606854267 1.0 14.254766118476994 -8.774714128955834 24.999537135705257 0.9826908360075045 1.1677929743783129 0.4724465930594356 0.07094895245205733 102.27109133583627 192600.27808403285 0.011006517442971514 0.011750301887416548 1.6799094418951508e-09 8.774714128955834 0.18510213837080836 REEDEPEERS(ph)GDETPGSEVPGDK ddPTM_A549_PD325901_60min_R1 4 REEDEPEERSGDETPGSEVPGDK 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(0.996)GDET(0.003)PGS(0.001)EVPGDK;REEDEPEERS(1)GDETPGSEVPGDK;REEDEPEERS(0.999)GDET(0.001)PGSEVPGDK;REEDEPEERS(0.978)GDET(0.022)PGSEVPGDK 211.89 4.7244999999999995e-74 1558580000.0 20171.800000000003 18933.3 19989.8 17783.3 24309.5 17413.0 19193.5 18756.86 20365.3 19759.8 22068.190000000002 True False 22219.6262863057 20528.875637422134 21346.428036432506 18881.73405219537 22602.08458322224 17271.194301261752 19923.91914558619 18382.73971282798 19509.417263238447 18512.162855771425 19353.942531782395 1.1480671832014266 1.0607076880439374 1.1029498512449398 0.9756014321727172 1.1678284435383568 0.8923863586398263 1.029450155329737 0.9498188641740805 1.0080332330842017 0.9565060361924385 1.0 14.240339862801944 -5.709402753970619 0.5953492212314958 0.9977408335806666 1.1746403907464114 0.361776172899573 0.065602419233589 1.8911326750633688 0.6145192029086506 0.010290361250217652 0.20564939507070804 1.9525278897886e-06 5.709402753970619 0.1768995571657448 REEDEPEERS(ph)GDETPGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_MK2206_60min_R1 2 REEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEK 36 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(0.995)GDET(0.005)PGSEVPGDKAAEEQGDDQDSEK;REEDEPEERS(0.919)GDET(0.081)PGSEVPGDKAAEEQGDDQDSEK 183.59 1.6517999999999995e-77 735490000.0 2214.59 2630.5 2150.88 1758.9299999999998 2866.3 2037.1999999999998 2272.8 2116.3 3653.9 3573.6 3617.0 True False 2588.358650472842 2764.3812142260736 2455.9071265401694 2189.867928961367 2444.6710669646504 2252.7751518160835 2685.7383404002794 2416.2920058969344 2826.297484079306 2766.321278027009 2718.7990758783976 0.9520227785264298 1.0167655413568761 0.9033058560043492 0.8054541243559376 0.8991731270817866 0.8285919955626917 0.9878399489791511 0.8887350401633749 1.0395389306825393 1.01747911516163 1.0 11.40875382221652 -8.761425696686453 24.99999999998446 1.0186711657837542 0.9095598560953444 0.4033092050839636 0.05891743531400253 0.2703070344129415 491237.97014908306 0.010482787588132847 0.011517972952333682 1.7321053507892665e-09 8.761425696686453 -0.10911130968840976 REEDEPEERS(ph)GDETPGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_PD325901_60min_R1 3 REEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEK 36 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(0.68)GDET(0.287)PGS(0.033)EVPGDKAAEEQGDDQDSEK;REEDEPEERS(0.943)GDET(0.056)PGSEVPGDKAAEEQGDDQDSEK;REEDEPEERS(1)GDETPGSEVPGDKAAEEQGDDQDSEK 160.09 8.173399999999999e-52 563180000.0 3846.34 3669.15 3624.17 4872.0 5335.5 4711.7 4258.81 3979.1600000000003 4743.9 4282.7 5699.0 True False 4236.81760527415 3978.362147383046 3870.1279701046333 5172.932374885195 4960.752886475749 4673.329477359154 4420.881345060254 3899.7925322093683 4544.53038035663 4012.2895911098444 4998.059128937526 0.8476925734519674 0.7959814089331823 0.7743261674711989 1.0349882307184395 0.992535854118695 0.9350288495591683 0.8845196167177063 0.7802613837900665 0.909259026978077 0.8027695326531213 1.0 12.287152253817865 -14.999999999999998 0.11597570151279361 1.375115497239021 0.8252129374806204 0.0 0.09861449152302085 103.1248337239804 0.8387276886439803 9.127017521070798 0.37160877241772494 1.000000000000004e-15 14.999999999999998 -0.5499025597584005 REEDEPEERSGDET(ph)PGSEVPGDK ddPTM_A549_PD325901_60min_R1 1 REEDEPEERSGDETPGSEVPGDK 23 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(0.189)GDET(0.782)PGS(0.029)EVPGDK 58.876999999999995 0.00066909 4259200.0 280.75 401.85 236.02 547.94 614.4 549.14 384.4 451.87 632.07 550.29 549.25 True False 309.2515333227737 435.7153097926978 252.03773650355677 581.7850093379709 571.2466635649336 544.6679859067868 399.02855235175116 442.85709836484284 605.5062959826338 515.5445954869211 481.6957319826174 0.6420059651554758 0.9045446759499648 0.5232301632945584 1.2077852692266855 1.185907670831403 1.1307303547510814 0.8283829933667558 0.9193710239907708 1.2570306435774776 1.070270216771456 1.0 8.91197833089955 -6.268619805552755 24.956868217111495 1.0983477802569652 0.7113887050751884 0.5708750977914198 0.14733183915519066 305.05157116923647 1060262.9503099443 0.022587896673131994 0.05351112142158211 5.38741206387088e-07 6.268619805552755 -0.38695907518177686 REEEEQQEGGFAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 REEEEQQEGGFASPR 15 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 REEEEQQEGGFAS(1)PR;REEEEQQEGGFAS(1)PR 57.338 0.0044106 28376000.0 281.536 152.53 156.71 0.0 344.62 117.55 0.0 0.0 189.43 133.66 275.97 True False 329.05239390565396 160.29312549169464 178.93383443060975 0.0 293.9268545153535 129.98906297662512 0.0 0.0 146.52440745755032 103.46611316909846 207.43903261547177 1.586260742526774 0.7727240311076308 0.8625851758685074 0.0 1.4169312824563909 0.6266374333589614 0.0 0.0 0.7063492613232609 0.49877842113201926 1.0 7.696543573137403 -5.229502001018595 3.189338260472036 0.7094791803976925 1.7512636622642108 0.25971617506955413 0.44422801005617424 0.48332751965072357 7.0714052160898015 0.06305197310130146 1.291905947790303 5.895192608400503e-06 5.229502001018595 1.0417844818665183 REEEEQQEGGFAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 REEEEQQEGGFASPR 15 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 REEEEQQEGGFAS(1)PR;REEEEQQEGGFAS(1)PR 78.516 0.00020958 31792000.0 162.03 132.51 103.57 247.57 270.77 344.78999999999996 0.0 358.84000000000003 385.81 135.69 0.0 True False 178.47916631981832 143.67708274388548 110.59888301700431 262.86183662773567 251.75204930578946 341.9821445547603 0.0 351.68265469546566 369.59574739041517 127.12251024299977 0.0 0.0 REEEMEMS(ph)DDEIEEMTETK ddPTM_A549_MK2206_60min_R1 2 REEEMEMSDDEIEEMTETK 19 1 A0A0C4DGT9;B1AKF7;Q16206-2;Q16206 A0A0C4DGT9 ENOX2 Ecto-NOX disulfide-thiol exchanger 2;Hydroquinone [NADH] oxidase;Protein disulfide-thiol oxidoreductase 1 REEEMEMS(0.999)DDEIEEMT(0.001)ETK;REEEMEMS(1)DDEIEEMTETK 52.50899999999999 0.0022670999999999998 2203590.0 688.26 651.55 445.05999999999995 492.65 492.12 649.38 668.78 844.78 850.9 545.35 772.91 True False 804.4214616585639 684.7111120049414 508.17620031706423 613.3492721158988 419.72979990742203 718.0969605764423 790.2886691714615 964.5301520302467 658.1725086080852 422.15505623797577 580.9751157691929 1.3846057082729524 1.1785549732167189 0.8746952950717257 1.055723826146742 0.7224574487182861 1.2360201686533583 1.3602797223511784 1.660191849616896 1.1328755582529302 0.7266319069088796 1.0 9.18233256145064 -9.959325124371508 1.4642666606045829 1.0249094306955686 1.168311358520593 0.13087796527055728 0.2557886439436959 0.895479194117488 3.841719632823208 0.07186038174954125 0.04590731143190335 1.0981834023906789e-10 9.959325124371508 0.14340192782502448 REEEMEMS(ph)DDEIEEMTETK ddPTM_A549_PD325901_60min_R1 6 REEEMEMSDDEIEEMTETK 19 1 A0A0C4DGT9;B1AKF7;Q16206-2;Q16206 A0A0C4DGT9 ENOX2 Ecto-NOX disulfide-thiol exchanger 2;Hydroquinone [NADH] oxidase;Protein disulfide-thiol oxidoreductase 1 REEEMEMS(1)DDEIEEMTETK;REEEMEMS(1)DDEIEEMTETK;REEEMEMS(1)DDEIEEMTETK;REEEMEMS(1)DDEIEEMTETK;REEEMEMS(1)DDEIEEMTETK;REEEMEMS(1)DDEIEEMTETK 102.27 9.199100000000001e-10 7676840.0 1877.7299999999998 2200.15 2018.4699999999998 2020.4100000000003 2673.48 2039.0000000000002 2578.17 2216.99 2082.4100000000003 2230.58 2477.6 True False 2068.355767288234 2385.564361927096 2155.455512246141 2145.206137015967 2485.703987805303 2022.395060028295 2676.2836701787564 2172.7703952549905 1994.8935494758437 2089.740798126835 2172.8709068004246 0.9518999774974711 1.097885914188922 0.9919850762878832 0.9872681024455364 1.1439722350857595 0.930747912220102 1.2316809350260078 0.9999537425140539 0.9180911499309204 0.9617418096890076 1.0 11.085386749263575 -8.518546889390624 24.901956357196863 0.9611998478794718 1.0496362240729344 0.174754792591299 0.08454796365963557 212.0638136931624 1219066.0430624 0.013373579419733335 0.01535392941871204 3.03007313279132e-09 8.518546889390624 0.08843637619346267 REEGDPS(ph)PHSGGVCKPK ddPTM_A549_MK2206_60min_R1 2 REEGDPSPHSGGVCKPK 17 2 O75376-2;O75376;E7EVK1;J3KRE4 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 REEGDPS(0.99)PHS(0.01)GGVCKPK;REEGDPS(0.988)PHS(0.012)GGVCKPK 61.766999999999996 0.00084926 7463200.0 1764.16 1992.1799999999998 1150.24 1677.58 2015.2399999999998 1667.0500000000002 1573.79 1336.27 2614.4 2567.0 2349.1 True False 2061.9070784290398 2093.5734527112327 1313.3613280292554 2088.587175309427 1718.800865572285 1843.45612450177 1859.727271532274 1525.6903646552448 2022.24257433891 1987.1129171410714 1765.7536381382192 1.1677207023076446 1.1856543333636629 0.7437964728839758 1.1828304527870592 0.9734092165793635 1.0440052817591694 1.0532201272954131 0.8640448654342895 1.145257487036033 1.1253624935108444 1.0 10.786068353679074 -11.43459769928771 2.2801446411053488 0.9992887243616777 1.056130206072258 0.0 0.1381300863339497 1.2867333830333132 12.119651711714694 0.10411162248902486 0.018595974672987924 3.6762268333696495e-12 11.43459769928771 0.05684148171058023 REEGDPS(ph)PHSGGVCKPK ddPTM_A549_PD325901_60min_R1 3 REEGDPSPHSGGVCKPK 17 2 O75376-2;O75376;E7EVK1;J3KRE4 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 REEGDPS(0.996)PHS(0.004)GGVCKPK;REEGDPS(0.995)PHS(0.005)GGVCKPK;REEGDPS(1)PHSGGVCKPK 75.358 0.00012315 30263600.0 4419.3 4541.599999999999 5215.9 4993.8 5093.200000000001 4892.5 4455.3 4969.9 3922.0 4850.5 4907.0 True False 4867.944082683287 4924.336570746587 5569.882339754687 5302.255684257327 4735.471202586129 4852.657102103202 4624.848879533705 4870.771445688873 3757.1719791223923 4544.23860220849 4303.470108035875 1.1311671652124107 1.144271122402214 1.2942769904115377 1.2320884196119821 1.100384360459151 1.1276149201180299 1.0746789831066144 1.1318241612957125 0.8730563672573491 1.0559475233075346 1.0 12.071284732544502 -8.26618163574126 1.2336653526496155 0.9421826580801959 1.1801113756981947 0.4771219206624773 0.07664866598837808 0.20058441109130973 0.5946995923117356 0.014832103759315315 0.019368616604258336 5.417742558168249e-09 8.26618163574126 0.23792871761799883 REEGPPPPS(ph)PDGAS(ph)SDAEPEPPSGR ddPTM_A549_PD325901_60min_R1 2 REEGPPPPSPDGASSDAEPEPPSGR 25 1 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 2 REEGPPPPS(0.992)PDGAS(0.528)S(0.478)DAEPEPPS(0.002)GR;REEGPPPPS(0.996)PDGAS(0.525)S(0.478)DAEPEPPS(0.001)GR 66.01 5.6031000000000006e-05 9425200.0 2285.8 2256.3 2203.89 1771.3400000000001 2513.5 1529.34 2097.0 1614.87 2296.18 2365.4 2117.73 True False 2517.852733282977 2446.446319485539 2353.4592284671794 1880.7516487949795 2336.960431104264 1516.8855620910613 2176.8024825224293 1582.6601510089934 2199.679539781042 2216.048240318312 1857.2626353965381 1.3556794205066203 1.3172322927625182 1.2671655497795011 1.012647114603383 1.2582821549119827 0.816731857509854 1.172048821225366 0.8521466597378053 1.1843664422352391 1.1931797894836615 1.0 10.858962125779565 -6.122838446399468 3.577441973715281 1.066958610331201 1.330782871752461 0.41842730769853675 0.1332800742227737 0.17067347745900405 3.944821269185478 0.01738743313887542 0.05106043456422251 7.53635857287255e-07 6.122838446399468 0.26382426142126003 REEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_A549_MK2206_60min_R1 2 REEGPPPPSPDGASSDAEPEPPSGR 25 1 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 REEGPPPPSPDGAS(0.071)S(0.929)DAEPEPPSGR;REEGPPPPSPDGAS(0.037)S(0.963)DAEPEPPSGR 228.76 1.5769999999999994e-95 46355000.0 1850.56 2020.74 1605.0 1760.8899999999999 2643.7 1907.36 2313.3 1666.3 3161.5 3411.6000000000004 3180.6 True False 2162.889286151849 2123.587034721611 1832.6131342041272 2192.308129049357 2254.815232088213 2109.1955691969006 2733.596666159787 1902.50312782973 2445.425297878083 2640.9171905408975 2390.7692399056755 0.9046834173912923 0.888244251797967 0.7665370223168968 0.9169885961624015 0.9431337807312485 0.8822246555590267 1.1433962845647276 0.7957702885221957 1.0228612854223287 1.1046307382828346 1.0 11.223259170667312 -7.157229652771789 1.0648024830957312 1.0008620889030388 0.8586022637348439 0.2935064166957878 0.09399497679454435 0.4326817589433896 0.9636628265657305 0.013719661137503619 0.03244757301541311 6.962582388388364e-08 7.157229652771789 -0.1422598251681949 REEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_A549_PD325901_60min_R1 2 REEGPPPPSPDGASSDAEPEPPSGR 25 1 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 REEGPPPPSPDGAS(0.034)S(0.966)DAEPEPPSGR;REEGPPPPSPDGAS(0.1)S(0.9)DAEPEPPSGR 225.71 2.3920999999999994e-95 57574000.0 2402.79 2907.1000000000004 3216.1 2799.2 2739.4 2203.5 2459.9 2861.7 2714.8 2808.1 3241.3 True False 2646.71947195949 3152.091519468337 3434.3638859803787 2972.1002265555476 2546.993994416956 2185.555426568097 2553.512840608931 2804.6211485397807 2600.706396971306 2630.7960867666557 2842.6406482935968 0.9310777546040806 1.1088603553743241 1.2081597046190085 1.045542013317675 0.895995769266821 0.7688468916674571 0.8982890053801821 0.9866252880832339 0.9148910181568249 0.9254761372479111 1.0 11.473016017271515 -6.612127880775457 5.430924258198919 0.9382134973296818 1.0916504996075063 0.4392914585250506 0.08462246513281582 0.16713664950986182 7.954248031091843 0.012936652068747142 0.02733599093793132 2.442711174927682e-07 6.612127880775457 0.15343700227782442 REEGS(ph)DIEDEDMEELLNDTR ddPTM_A549_MK2206_60min_R1 3 REEGSDIEDEDMEELLNDTR 20 1 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 REEGS(1)DIEDEDMEELLNDTR;REEGS(1)DIEDEDMEELLNDTR;REEGS(1)DIEDEDMEELLNDTR 149.44 1.2950999999999998e-21 21451300.0 668.18 852.47 629.76 674.75 1187.32 645.44 623.1600000000001 749.4200000000001 1321.69 993.37 1133.47 True False 780.9524485674292 895.8570818062346 719.0694376301497 840.0637802906783 1012.6668008332931 713.7400323916032 736.3801056863069 855.6525800024943 1022.3293253052296 768.9670270745722 851.9981168194321 0.9166128811208865 1.0514777722168345 0.8439800786350158 0.98599253179889 1.1885786844384685 0.837724894341368 0.8642978090553355 1.0042892855170908 1.1999197006698274 0.9025454539091933 1.0 9.734706431425053 -8.535573498180677 23.429662115093286 1.0948117124571541 0.9586548152118175 0.015325119003677057 0.11972575166336111 121.15806139913006 223609.8678366408 0.019633805761472202 0.022271877985119586 2.9135770114642713e-09 8.535573498180677 -0.13615689724533664 REEGS(ph)DIEDEDMEELLNDTR ddPTM_A549_PD325901_60min_R1 7 REEGSDIEDEDMEELLNDTR 20 1 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 REEGS(1)DIEDEDMEELLNDTR;REEGS(1)DIEDEDMEELLNDTR;REEGS(1)DIEDEDMEELLNDTR;REEGS(1)DIEDEDMEELLNDTR;REEGS(1)DIEDEDMEELLNDTR;REEGS(1)DIEDEDMEELLNDTR;REEGS(1)DIEDEDMEELLNDTR 115.92 9.9383e-15 72295500.0 878.4399999999999 1972.57 1632.94 1607.54 1929.96 1436.5600000000002 1344.95 1368.13 2313.62 1710.79 1760.88 True False 967.6185821266504 2138.8053966350176 1743.7611280659178 1706.8340948117698 1794.4062676005506 1424.8611316499503 1396.1328082348796 1340.8415738727788 2216.3865972302765 1602.7704274347527 1544.3029231380096 0.6265730431698323 1.3849649343983526 1.1291574353318006 1.1052456543587306 1.1619522573682197 0.9226565010669314 0.9040537237331328 0.8682503631788774 1.4352019697836218 1.037860126676402 1.0 10.592740057244589 -8.747330265564047 24.999587635447217 1.2055120696823398 1.0305531078157624 0.06805251516904454 0.21287237480126026 404.56400068826656 716836.3784908898 0.039171527756215394 0.04430925972838834 1.7892446793624574e-09 8.747330265564047 -0.17495896186657744 REEPEALY(ph)AAVNK ddPTM_A549_MK2206_60min_R1 2 REEPEALYAAVNK 13 1 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 1 REEPEALY(1)AAVNK;REEPEALY(1)AAVNK 155.08 9.926700000000001e-19 13726800.0 1678.81 2027.19 1889.4099999999999 1918.98 2358.85 2202.5699999999997 1943.18 2224.5699999999997 2911.8 2986.6 2746.1 True False 1962.1520850361978 2130.3653121714333 2157.3567488452454 2389.1301861462866 2011.8662897497 2435.644495452362 2296.2306530706674 2539.909609959902 2252.281949189121 2311.924985716216 2064.1675814956216 0.950577900082363 1.0320699400907398 1.0451461248519862 1.1574303402319732 0.97466228410194 1.1799645131949905 1.1124245306705676 1.2304764558503407 1.0911332826752362 1.1200277566810144 1.0 11.011344386808082 -5.313802814031859 1.7702766537886934 1.0734869270057488 0.9188104928605946 0.20712568102001605 0.07553188496551184 1.1373194882627196 3.8140196774906863 0.011502179380200962 0.2833580200503055 4.8550888935402755e-06 5.313802814031859 -0.1546764341451542 REEPEALY(ph)AAVNK ddPTM_A549_PD325901_60min_R1 2 REEPEALYAAVNK 13 1 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 1 REEPEALY(1)AAVNK;REEPEALY(1)AAVNK 169.79 4.8313e-22 24528000.0 4891.0 4788.7 3745.6000000000004 3995.4 5230.7 4231.4 3912.5 4587.4 4958.8 4813.1 5407.200000000001 True False 5387.530719436102 5192.260554944113 3999.7989401225404 4242.186783788238 4863.313676935378 4196.9408813162 4061.392328502151 4495.900708254319 4750.398880691512 4509.200044591215 4742.148679064927 1.1360948557391992 1.0949172846195832 0.8434570931485924 0.8945705988755981 1.0255506535266081 0.8850293749422818 0.8564455910950034 0.9480724904519098 1.0017397602194564 0.9508769863116892 1.0 12.211325180545497 REES(ph)LEKEPEYVPWTATSGPGGIR ddPTM_A549_MK2206_60min_R1 1 REESLEKEPEYVPWTATSGPGGIR 24 2 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 REES(1)LEKEPEYVPWTATSGPGGIR 78.921 4.4761e-06 2527300.0 1056.7 918.35 929.84 817.97 684.58 888.78 653.41 777.87 1346.8 806.7 1269.7 True False 1235.045126165408 965.0900924100033 1061.7052938992927 1018.3726867200684 583.8791888576421 982.8301096755836 772.1261391239639 888.1354546269658 1041.7519503976605 624.465909722518 954.3984480627043 1.2940560922666808 1.0112024955289916 1.1124340112396518 1.0670309541965652 0.6117771775958305 1.029790138144704 0.8090186448765421 0.9305709333766802 1.0915272887464051 0.6543031487426416 1.0 9.898447886858515 -2.9081398175690443 1.122090791320979 0.9938510162554336 67.76546211490768 0.19910887834971513 0.17294511058905318 375.8875097594416 2.712387184723389 0.0211911080544543 63731.95818637366 0.0012355495942849865 2.9081398175690443 66.77161109865224 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEK ddPTM_A549_MK2206_60min_R1 2 REESPMDVDQPSPSAQDTQSIASDGTPQGEK 31 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.941)PS(0.058)AQDT(0.001)QSIASDGTPQGEK;REESPMDVDQPS(0.952)PS(0.047)AQDT(0.001)QSIASDGTPQGEK 126.56 1.316e-22 62066000.0 1508.18 1548.02 1345.15 1659.33 1967.21 2065.52 1486.17 1931.9699999999998 2206.7 2275.5 2214.3 True False 1762.7239125391748 1626.8076058719814 1535.9124968689594 2065.8659244901532 1677.8360149473292 2284.0919554187894 1756.1878517039263 2205.832663909983 1706.8859733757931 1761.4629695966141 1664.4281984289555 1.0590567464568312 0.9773972871929928 0.922786875588084 1.241186568720785 1.0080555091117955 1.3722982809199766 1.0551298357968113 1.3252795560613886 1.025508925519835 1.0582991631956544 1.0 10.70081092023202 -4.114667458856811 16.1369524427249 1.0624245081148298 1.0728798211287325 0.0 0.14525708944324411 0.0 0.0 0.018808015379310858 0.0 7.679492863484656e-05 4.114667458856811 0.010455313013902678 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEK ddPTM_A549_PD325901_60min_R1 3 REESPMDVDQPSPSAQDTQSIASDGTPQGEK 31 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.946)PS(0.054)AQDTQSIASDGTPQGEK;REESPMDVDQPS(0.962)PS(0.038)AQDTQSIASDGTPQGEK;REES(0.001)PMDVDQPS(0.967)PS(0.032)AQDTQSIASDGTPQGEK 173.81 2.6014999999999997e-58 95190000.0 4115.0 5461.5 4948.1 4074.0 5857.299999999999 5718.5 5529.7 4347.18 6247.7 5969.1 4978.6 True False 4532.751770697108 5921.75977213592 5283.907821342464 4325.641727274689 5445.903454588024 5671.930431962634 5740.135759467944 4260.472084603262 5985.130895961998 5592.210007307023 4366.263761945671 1.038130543143653 1.3562533312227334 1.2101668862505635 0.9906963855401901 1.2472685461771669 1.2990352258140125 1.314656207784858 0.9757706627198202 1.370767141491914 1.2807769553562318 1.0 12.092183569493102 -11.109706678999343 1.4569034448696612 1.000121813088361 1.2227923582110587 0.0 0.15861342105264684 0.4567781605525324 1.7355059268313293 0.09792588212195802 0.02130778636479101 7.767715683502567e-12 11.109706678999343 0.2226705451226978 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEKEK ddPTM_A549_MK2206_60min_R1 2 REESPMDVDQPSPSAQDTQSIASDGTPQGEKEK 33 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.849)PS(0.151)AQDTQSIASDGTPQGEKEK;REESPMDVDQPS(0.961)PS(0.036)AQDT(0.002)QSIASDGTPQGEKEK 127.01 2.6198000000000003e-23 26088500.0 1718.1100000000001 2208.6000000000004 1930.81 2372.0299999999997 2918.8 1943.4299999999998 1752.31 1898.13 3023.0 2443.6 2580.5 True False 2008.0849642434457 2321.0083063066745 2204.6278913723804 2953.177456484473 2489.4483865109814 2149.082472655573 2070.6820447319656 2167.19574027933 2338.2953267390317 1891.5890628460938 1939.6906318231142 1.035260433441413 1.1965868516492035 1.1365873790400542 1.522499210974063 1.2834254832540746 1.107951153342248 1.0675321160806621 1.1172893783800892 1.2054991081445132 0.9752014222330858 1.0 10.921610854844795 -7.277045117548242 19.65114971442777 1.0992108003997951 1.243263882637977 0.26703022871207893 0.12589117401991984 59.01079090605974 74308.12375930595 0.019915837387604357 0.03197493993862241 5.283903560379987e-08 7.277045117548242 0.1440530822381818 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEKEK ddPTM_A549_PD325901_60min_R1 1 REESPMDVDQPSPSAQDTQSIASDGTPQGEKEK 33 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REES(0.001)PMDVDQPS(0.948)PS(0.051)AQDTQSIASDGTPQGEKEK 97.804 5.5989e-10 19969000.0 1023.1 999.39 1250.2 1058.6 1559.7 1339.1 1090.4 1171.1 1250.6 1283.0 1649.4 True False 1126.9643588335873 1083.6121026595104 1335.0460900633277 1123.987317744964 1450.1520526728957 1328.1948135771897 1131.8957686897747 1147.741491789822 1198.0416310786482 1201.9911610418494 1446.534256408064 0.7790789287161363 0.7491091882955213 0.9229273929387776 0.7770208778435522 1.0025010097402154 0.9181910540267972 0.7824880494019005 0.793442316837913 0.8282151810587217 0.8309455207971034 1.0 10.498384773823021 -10.65301837322093 0.8693474468545271 1.0025200270589376 0.8413079579863617 0.0 0.08919109789723641 0.5351786443235567 0.7039450215475825 0.05558353384486631 0.014021914027524793 2.223215833504825e-11 10.65301837322093 -0.1612120690725759 REGDS(ph)LEAR ddPTM_A549_PD325901_60min_R1 1 REGDSLEAR 9 1 Q2NL68;A0A2R8Y8D9 Q2NL68 PROSER3 Proline and serine-rich protein 3 1 REGDS(1)LEAR 47.288000000000004 0.014525999999999999 783650.0 0.0 114.08 0.0 0.0 163.78 0.0 0.0 0.0 102.61 0.0 88.021 True False 0.0 123.69392196379484 0.0 0.0 152.2766578103268 0.0 0.0 0.0 98.2976585358869 0.0 77.19497501109146 0.0 1.6023571734562043 0.0 0.0 1.972623966630568 0.0 0.0 0.0 1.273368616568156 0.0 1.0 6.270435033539696 -8.780979396449128 24.98135479250567 1.1290907949199283 0.47666409191832415 0.0 0.7495853522699729 306.0031212764631 391214.6472205808 0.11213544457210944 0.1194599553965137 1.655848517426198e-09 8.780979396449128 -0.6524267030016041 REGPGS(ph)EPDSQVDGGLSGASLGEK ddPTM_A549_MK2206_60min_R1 1 REGPGSEPDSQVDGGLSGASLGEK 24 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 REGPGS(0.999)EPDS(0.001)QVDGGLSGASLGEK 170.44 2.4665e-41 16014000.0 3118.5 3626.5 3479.1 3238.1 4681.5 3379.1 3739.6 4229.8 5525.8 5571.7 5699.9 True False 3644.8265599951046 3811.073359966109 3972.488694834628 4031.4346453638336 3992.857551545552 3736.674119134956 4419.036913833546 4829.387103219226 4274.215122889363 4313.049100286293 4284.457520762865 0.8507089969574791 0.8895112955367875 0.9271859215743398 0.9409440111909478 0.931940048931704 0.8721463804989776 1.0314110695271217 1.1271875330343653 0.9976094061327795 1.0066733254758322 1.0 12.064896832838874 -7.766323224388589 24.999645132070395 1.0127262011731553 0.9057677808742524 0.6821693578955219 0.043364078717528884 69.20403620489496 354244.84401651006 0.007269777386449612 0.010217521514108213 1.7126821665108615e-08 7.766323224388589 -0.1069584202989029 REGPGS(ph)EPDSQVDGGLSGASLGEK ddPTM_A549_PD325901_60min_R1 1 REGPGSEPDSQVDGGLSGASLGEK 24 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 REGPGS(0.993)EPDS(0.007)QVDGGLSGASLGEK 117.94 3.3112e-16 20729000.0 9079.3 8850.4 10925.0 10817.0 11935.0 10000.0 9587.6 11095.0 9887.0 11582.0 11099.0 True False 10001.0238521726 9596.2542684815 11666.436197361902 11485.14152281058 11096.726773514776 9918.56331548943 9952.461364536031 10873.701521140874 9471.483772968657 10850.71054340351 9733.89336235789 1.0274433343237286 0.9858598107917786 1.1985374981071173 1.179912404549753 1.1400090755490626 1.018971848802626 1.0224543247025255 1.1170968405294799 0.9730416617872554 1.114734889675747 1.0 13.248801254219929 -8.766924489556315 24.998454613651536 0.9872696675986447 1.0872200143699147 0.027353407748324177 0.07626163663243372 122.4923832342019 558258.4520850118 0.012107822222058553 0.013070945450156638 1.7103126599715335e-09 8.766924489556315 0.09995034677127002 REGPVGGES(ph)DSEEMFEK ddPTM_A549_MK2206_60min_R1 4 REGPVGGESDSEEMFEK 17 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 REGPVGGES(0.627)DS(0.373)EEMFEK;REGPVGGES(0.668)DS(0.332)EEMFEK;REGPVGGES(0.893)DS(0.107)EEMFEK;REGPVGGES(0.899)DS(0.101)EEMFEK 110.72 2.2464e-09 246692800.0 5015.040000000001 6313.0 4832.21 4566.47 7363.0599999999995 5820.34 6199.400000000001 5302.42 8304.2 8156.7 7555.6 True False 5861.456146043883 6634.304734996847 5517.490039397211 5685.255354996628 6279.963627786603 6436.2445155709975 7325.750733666618 6054.0542729802055 6423.311959082459 6314.09580492582 5679.335996048331 1.0320671554072993 1.1681479559605175 0.97150266214858 1.001042262502591 1.105756664538986 1.133274122194799 1.2898956389908711 1.065979240740925 1.1309969974574112 1.1117665532236785 1.0 12.471506550447316 -4.975472134846195 16.27592102036786 1.0807941056357209 0.909918891164904 0.012195838030391482 0.08700219155304077 7986483.533559811 138153979.78207508 0.012684913982266312 35609011.95734444 1.05810280369164e-05 4.975472134846195 -0.17087521447081688 REGPVGGES(ph)DSEEMFEK ddPTM_A549_PD325901_60min_R1 8 REGPVGGESDSEEMFEK 17 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 REGPVGGES(0.985)DS(0.015)EEMFEK;REGPVGGES(0.908)DS(0.092)EEMFEK;REGPVGGES(0.863)DS(0.137)EEMFEK;REGPVGGES(0.991)DS(0.009)EEMFEK;REGPVGGES(0.601)DS(0.399)EEMFEK;REGPVGGES(0.991)DS(0.009)EEMFEK;REGPVGGES(0.994)DS(0.006)EEMFEK;REGPVGGES(0.994)DS(0.006)EEMFEK 247.8 8.1206e-76 481622900.0 31700.899999999998 31585.6 32032.6 33307.5 37270.6 32879.7 29936.5 36186.600000000006 34910.2 36078.8 38201.7 True False 34919.15203103087 34247.42936167285 34206.52486367185 35364.82862817909 34652.841632589865 32611.938624429808 31075.749889381354 35464.829875161464 33443.04569749067 33800.77841075346 33503.13308052864 1.042265269552512 1.02221572171639 1.0209948061111935 1.0555678044550536 1.0343164488317487 0.9733996682054558 0.9275475763621034 1.058552637149417 0.9982065145103431 1.0088841043465815 1.0 15.032008396564182 -7.233403133796159 22.219846100344583 0.9965066089464752 1.0347143887618566 0.30625464494045074 0.03036709872895134 189.89248102678684 150496.46400393723 0.004338399764582881 0.0075123215653032215 5.8424750468879206e-08 7.233403133796159 0.03820777981538137 REGPVGGESDS(ph)EEMFEK ddPTM_A549_MK2206_60min_R1 2 REGPVGGESDSEEMFEK 17 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 REGPVGGES(0.283)DS(0.717)EEMFEK;REGPVGGES(0.216)DS(0.784)EEMFEK 175.65 1.7400999999999998e-30 82338000.0 2513.9700000000003 3131.8 3160.19 2381.87 3394.6 2763.99 2791.2 2259.35 3894.9 3425.0 3953.9 True False 2938.2666753345834 3291.195243000651 3608.3524614208945 2965.428256926208 2895.2588367994267 3056.4735872119286 3298.3249101219903 2579.6197814691845 3012.7113688772247 2651.2901212341917 2972.037507911418 0.9886371445559021 1.1073868463098635 1.21410057975905 0.9977761885684093 0.9741663182555368 1.0284101661152478 1.1097857619030753 0.8679634003953057 1.0136855140143874 0.8920782844013871 1.0 11.537236607852304 -6.382386176160565 18.821711426731632 1.002867133887965 1.1042213639695337 0.28800464965436656 0.0791877527056732 2.6475235154012213 399.6564771923795 0.009443328108535367 0.021944366052123934 4.145852280594201e-07 6.382386176160565 0.10135423008156885 REGPVGGESDS(ph)EEMFEK ddPTM_A549_PD325901_60min_R1 1 REGPVGGESDSEEMFEK 17 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 REGPVGGES(0.061)DS(0.939)EEMFEK 119.02 2.8518999999999997e-10 229460000.0 8532.2 8010.9 7568.6 8185.2 8561.5 6914.1 7314.2 8764.1 7707.1 7650.5 9102.9 True False 9398.382662926333 8686.006657255992 8082.250709689093 8690.781214062046 7960.169775571581 6857.7938619625465 7592.545883483812 8589.293150196558 7383.197389162205 7167.446124357498 7983.301008037452 1.1772552047660736 1.0880219408626917 1.012394584840534 1.088620008855023 0.9971025478755489 0.8590173231672257 0.9510534396535675 1.07590746503846 0.9248301400296602 0.8978048199787825 1.0 12.962769693164887 -5.12842735845672 0.6484974371876009 0.9662293727988784 1.3358989547985527 0.5453316624549477 0.061275752077892945 2.1058052128513998 0.5370506736137702 0.010158307832943218 0.5974367750658369 7.439994963374662e-06 5.12842735845672 0.36966958199967426 REGS(ph)YDR ddPTM_A549_MK2206_60min_R1 5 REGSYDR 7 1 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 REGS(1)YDR;REGS(1)YDR;REGS(1)YDR;REGS(1)YDR;REGS(1)YDR 105.98 0.0040399 1238622500.0 7235.7 8449.35 6675.219999999999 6104.29 6890.34 5028.59 4409.36 5556.06 7917.23 10694.509999999998 10178.47 True False 8456.909264119475 8879.385824908217 7621.866570530881 7599.841324031995 5876.780113578208 5560.712056092108 5210.483636319679 6343.648519720132 6123.990046218349 8278.612763340225 7650.874987518937 1.1053519078426248 1.160571286211496 0.9962084837308964 0.993329695809931 0.768118695334213 0.7268073344765711 0.6810310774675669 0.8291402656648663 0.8004300235213052 1.082047841174419 1.0 12.901409034816172 -6.212401029489799 1.8283680764020762 0.8604245785358674 1.1275206838673992 0.4741100304258308 0.11488556843351476 0.2641385195833289 1.6695582664423678 0.01767982402917121 0.06367562241657779 6.131955161414304e-07 6.212401029489799 0.26709610533153183 REGS(ph)YDR ddPTM_A549_PD325901_60min_R1 6 REGSYDR 7 1 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 REGS(1)YDR;REGS(1)YDR;REGS(1)YDR;REGS(0.999)Y(0.001)DR;REGS(1)YDR;REGS(1)YDR 123.86 0.0030893 2269621600.0 6650.290000000001 6759.86 6056.31 6578.729999999999 7455.389999999999 6828.379999999999 6450.2 6732.58 6945.92 7452.57 8134.68 True False 7325.422545115252 7329.537125930732 6467.327616150561 6985.0832107201295 6931.749126099228 6772.771937222175 6695.665890684873 6598.29341029316 6654.00713748745 6982.013458336449 7134.165929985176 1.026808545947357 1.0273852890250847 0.906528903255268 0.9791029924551592 0.9716271241974928 0.9493432033527497 0.9385352059927188 0.9248864513453882 0.932695875423979 0.9786727035589087 1.0 12.800529055776995 -5.725038475332414 24.696874732468558 0.9593682080046627 1.0270971452565796 0.5233898096351591 0.02661241742074824 114.37182155353953 77595.92049356159 0.00437458074096797 0.01694153194062792 1.88348221927236e-06 5.725038475332414 0.06772893725191687 REGT(ph)PPPPPPSR ddPTM_A549_MK2206_60min_R1 2 REGTPPPPPPSR 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 REGT(1)PPPPPPSR;REGT(1)PPPPPPSR 109.07 6.4342e-05 156204000.0 5078.3 5147.8 4909.799999999999 4450.200000000001 6821.700000000001 5420.2 4587.0 5099.4 7708.6 7168.400000000001 8158.5 True False 5935.3928874853755 5409.801031968437 5606.083468109294 5540.499199777072 5818.2369666513505 5993.761966362429 5420.398524910278 5822.255566257533 5962.614408104694 5549.053461329982 6132.5192868548265 0.9678555598199267 0.8821498602645165 0.914156679478537 0.9034621728223895 0.9487515154045832 0.9773735207339949 0.8838779417341592 0.9494068088359136 0.9722944403755359 0.904857074518214 1.0 12.582264150747216 -8.91659577214295 0.6016192197397978 0.9974224775303051 0.920226723557037 0.0 0.04080880795242332 0.4000944575412246 0.3231727436719963 0.01001105530568852 0.00887253079277087 1.2117254453625102e-09 8.91659577214295 -0.07719575397326806 REGT(ph)PPPPPPSR ddPTM_A549_PD325901_60min_R1 2 REGTPPPPPPSR 12 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 REGT(1)PPPPPPSR;REGT(1)PPPPPPSR 106.6 8.8925e-05 217051000.0 4533.3 4226.1 3979.4 4305.2 4824.9 4840.0 3791.5 4213.1 4327.5 5160.9 6117.1 True False 4993.5172787609245 4582.248278499238 4249.466014076154 4571.122426181392 4486.01566900138 4800.584644696884 3935.7876072884087 4129.066415386989 4145.630224286627 4835.039893235294 5364.735479491798 0.9308040066187868 0.8541424448635284 0.7921110053461027 0.8520685583950571 0.8362044477589677 0.8948408850815593 0.7336405722768732 0.7696682215127848 0.7727557565763415 0.901263428871486 1.0 12.389291322030907 -10.83557311310303 1.0899642313871436 0.9996729823670399 0.8217250592404419 0.3433196307535047 0.061412494981530646 0.295253360190127 0.6244952080547084 0.03964069586019403 0.009820460306826066 1.4602488971000236e-11 10.83557311310303 -0.17794792312659802 REHEKEVLQK ddPTM_A549_PD325901_60min_R1 1 REHEKEVLQK 10 2 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 0 51.927 0.0071634 1690400.0 169.33 232.54 267.46 238.16 394.57 331.14 217.87 430.12 461.61 293.46 391.04 False True 186.52025694584245 252.1369618992009 285.61144396763524 252.870602299396 366.8567643926039 328.443305629117 226.16116207303855 421.54091917738737 442.21013699201603 274.93088551780295 342.94455900679617 0.5438787467164515 0.7352120197778216 0.8328210390472334 0.7373512588499322 1.069726154732007 0.9577154586744973 0.6594685821172532 1.2291809509916547 1.289450802988983 0.8016773507473977 1.0 8.42183155652028 -6.521667875014089 0.5026282128659433 1.1328351439757918 0.5467729215040568 0.3108825441964109 0.18637498061395344 1.0333087293249583 0.3545995833035595 0.040091735420264576 0.2865857024013791 3.0083760668370296e-07 6.521667875014089 -0.586062222471735 RELDRYS(ph)LDSEDLYSR ddPTM_A549_PD325901_60min_R1 2 RELDRYSLDSEDLYSR 16 2 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RELDRYS(0.996)LDS(0.004)EDLYSR;RELDRYS(0.999)LDS(0.001)EDLYSR 126.26 4.383e-09 33422000.0 5936.700000000001 5915.8 6380.6 6684.6 6572.3 6109.9 6230.7 5731.200000000001 6281.3 7518.6 7203.8 True False 6539.38941363245 6414.3452275019035 6813.625885664746 7097.4925601719115 6110.68432120412 6060.143000130891 6467.812698069862 5616.886719960575 6017.318804809143 7043.8743128677015 6317.77826865067 1.0350773856818358 1.0152849553664152 1.0784844918465266 1.1234159000783943 0.9672204470242068 0.9592205902827919 1.0237479732651706 0.8890604388305339 0.9524422271461424 1.114929016711457 1.0 12.625201589215767 -6.78855582422193 24.997503853270462 0.9718026272287247 1.060754122726018 0.25742307597555947 0.059042807382495774 132.88060343229253 122496.69929720706 0.006088146477542719 0.01150759217127101 1.6272121403157358e-07 6.78855582422193 0.08895149549729331 RENPPVEDS(ph)SDEDDKR ddPTM_A549_MK2206_60min_R1 4 RENPPVEDSSDEDDKR 16 2 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 RENPPVEDS(0.847)S(0.153)DEDDKR;RENPPVEDS(0.5)S(0.5)DEDDKR;RENPPVEDS(0.975)S(0.025)DEDDKR;RENPPVEDS(0.5)S(0.5)DEDDKR 96.48700000000001 9.9339e-07 32734400.0 2764.0299999999997 2772.46 2467.99 2819.83 3652.7400000000002 2894.07 2826.1099999999997 3396.79 4392.63 4452.5599999999995 3915.73 True False 3230.530689954551 2913.5663718658875 2817.9880928875036 3510.6884765869777 3115.4267847554174 3200.3185664718108 3339.5776052396313 3878.295384733092 3397.706318588711 3446.7236035627766 2943.3461723498244 1.0975707581740044 0.9898823316252461 0.9574096718082464 1.192754188945507 1.058464279201047 1.0873062083339087 1.1346193786555099 1.3176484034281464 1.1543685722417583 1.1710221638017795 1.0 11.523241514933027 -6.24711783646913 24.87304304358237 1.102661607975906 1.0124470678351698 0.21035223328749308 0.08853196773039275 1208.0364708081834 2098061.7149136905 0.01402093701717644 0.036910991904038966 5.6608567302403e-07 6.24711783646913 -0.09021454014073615 RENPPVEDS(ph)SDEDDKR ddPTM_A549_PD325901_60min_R1 1 RENPPVEDSSDEDDKR 16 2 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 RENPPVEDS(0.913)S(0.087)DEDDKR 73.405 0.00019389 6451700.0 974.3 1059.6 1080.7 1020.4 895.83 809.93 1231.8 847.2 822.99 832.44 1204.9 True False 1073.2102187582484 1148.8962106665235 1154.042800777027 1083.4277905034585 832.9099912457267 803.334198611436 1278.676823066823 830.3019313844577 788.402592324818 779.8795963349011 1056.7049384904074 1.015619573323297 1.087244100806247 1.0921145144127697 1.0252888493652987 0.7882143452794015 0.7602256498952934 1.2100604213069368 0.7857462392203962 0.7460953040033276 0.73802966933137 1.0 10.045356876895918 -6.612529788360169 6.389647998341455 0.8813359156719567 1.0658311529364672 0.32252131884910584 0.133904191655394 0.2193251910187741 12.872160094177916 0.020062393819590157 0.042076928560214145 2.4404516711497917e-07 6.612529788360169 0.18449523726451056 RENPPVEDS(ph)SDEDDKRNQGNLYDK ddPTM_A549_MK2206_60min_R1 1 RENPPVEDSSDEDDKRNQGNLYDK 24 3 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 RENPPVEDS(0.803)S(0.197)DEDDKRNQGNLYDK 68.942 3.1235e-05 10354000.0 1211.5 1481.2 1100.1 1442.8 2359.5 1546.8 1174.1 1427.5 2182.4 2037.6 2616.7 True False 1415.9715816687724 1556.5867532832772 1256.110722079725 1796.2860647697541 2012.4206756107505 1710.4813493172583 1387.4187722034342 1629.8524965354025 1688.0898845766656 1577.304744825341 1966.9011727539407 0.7198997088838028 0.7913904241074984 0.6386242173626812 0.9132568985429496 1.0231427503767645 0.8696325839911629 0.7053830621600835 0.8286397502388886 0.8582484508934937 0.8019237400814045 1.0 10.941708755669659 -14.999999999996486 0.08432816806896654 1.6048668519759814 0.6478798951557703 0.023925294933520025 0.11226051665864321 124.49703837469531 0.7719650153137652 13.869128248959415 1.2716596001690517 1.0000000000080904e-15 14.999999999996486 -0.9569869568202112 RENPPVEDS(ph)SDEDDKRNQGNLYDK ddPTM_A549_PD325901_60min_R1 1 RENPPVEDSSDEDDKRNQGNLYDK 24 3 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 RENPPVEDS(0.839)S(0.161)DEDDKRNQGNLYDK 79.458 3.5515e-06 15810000.0 1634.3 1841.9 1752.2 1733.7 1771.3 2203.2 1576.6 1760.4 1984.0 1960.3 2367.6 True False 1800.2129328919293 1997.1233771486127 1871.1148288345578 1840.786711481621 1646.8899986532647 2185.257869668632 1636.5983757486226 1725.287440992916 1900.6193795458491 1836.526323453108 2076.4002094529733 0.8669874548732561 0.961820061497082 0.9011340011988836 0.8865278972239053 0.7931467118697397 1.0524261458461022 0.7881902382295481 0.8309031337689193 0.9153434732346547 0.8844760827378938 1.0 11.019868823033628 -9.988711982905091 0.9172189361402228 0.9909057494421352 0.8890121491499182 0.0005386817831362078 0.07829349528729426 0.5145025240165874 0.8775647000237464 0.026657565364395515 0.013474492401636786 1.0263323476616917e-10 9.988711982905091 -0.10189360029221695 RENPPVEDSS(ph)DEDDKR ddPTM_A549_PD325901_60min_R1 1 RENPPVEDSSDEDDKR 16 2 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 1 RENPPVEDS(0.348)S(0.652)DEDDKR 56.303999999999995 0.0035083 5484500.0 1021.7 909.36 1020.9 1096.9 982.16 710.5 755.31 819.27 1045.5 921.66 1071.7 True False 1125.4222318642123 985.9949585991976 1090.184413170413 1164.6530217593534 913.1764698680582 704.7139235655242 784.0537353714913 802.9290171451179 1001.5612708241861 863.4662303085207 939.8876940660382 1.1974007522063994 1.0490561423713245 1.1599092317659547 1.2391406219193701 0.9715804086311367 0.7497852435080501 0.8341993839493788 0.8542818702855606 1.065618027714931 0.9186908561097216 1.0 9.876344571146305 -6.778560666351905 24.83852106149416 0.9778640513995656 1.1532489654491587 0.5147003637566099 0.10439915857063657 203.9869455763509 295931.6984644131 0.017835879054012366 0.03376724706395984 1.6650962151848867e-07 6.778560666351905 0.1753849140495931 RENS(ph)FRR ddPTM_A549_MK2206_60min_R1 2 RENSFRR 7 2 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 RENS(1)FRR;RENS(1)FRR 82.645 0.0048814999999999996 907400000.0 3058.2 3218.7 2991.2 3018.1 4223.4 2797.0 2901.3999999999996 3365.5 4137.9 3919.3 4364.700000000001 True False 3574.3493941885604 3382.518081820742 3415.3971383373096 3757.5346354876574 3602.143454704148 3092.976683501664 3428.546823670083 3842.5699314114836 3200.6722568684872 3033.9274079279326 3280.8245304081956 1.0894667974650398 1.030996339630481 1.0410179229891245 1.1453019204962327 1.0979384667841332 0.9427437081241404 1.045025965848746 1.1712208000753386 0.9755694726137225 0.9247454046408436 1.0 11.679842720371685 RENS(ph)FRR ddPTM_A549_PD325901_60min_R1 4 RENSFRR 7 2 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 RENS(1)FRR;RENS(1)FRR;RENS(1)FRR;RENS(1)FRR 72.243 0.006536 1880809000.0 5589.58 5597.4 5876.400000000001 6028.8 6621.880000000001 6028.61 6029.71 5992.08 5800.910000000001 6878.5599999999995 6990.87 True False 6157.030046768687 6069.112542077007 6275.207841663847 6401.185283601775 6156.781993045834 5979.514998939272 6259.173913633914 5872.563263704173 5557.117925907918 6444.246547697609 6131.037308776192 1.0042395334889396 0.9898997896146312 1.0235148679785857 1.0440623602858987 1.0041990748013863 0.9752860238478691 1.020899661575098 0.957841710618523 0.906391144929628 1.0510858478178036 1.0 12.581915468467571 -8.274222749024705 20.03276583025748 0.9547141096180951 1.0085871503289843 0.0 0.03909484969554398 49.16026659144212 77038.52519407983 0.006083336931542912 0.007395806573561662 5.318354116717603e-09 8.274222749024705 0.053873040710889164 RENS(ph)LLR ddPTM_A549_PD325901_60min_R1 1 RENSLLR 7 1 A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2;A0A2R8Y7K8;A0A2R8Y604 A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 RENS(1)LLR 64.84100000000001 0.010654 5294800.0 805.48 1053.3 941.67 779.9 1221.2 1132.7 859.18 846.71 1168.7 942.57 991.89 True False 887.2517366369643 1142.0652875566718 1005.5773889217198 828.0726517185883 1135.42712491129 1123.4756667454883 891.876565061336 829.8217048188546 1119.5836032637267 883.0559693399978 869.8938181087642 1.0199540658490227 1.312878955778345 1.1559771640956653 0.951923826196283 1.3052479524223102 1.2915089673680362 1.025270609463997 0.9539344774549262 1.2870347851164328 1.015130756141996 1.0 9.764695501728228 -11.149746813153321 1.5320274707951427 1.0000619925271392 1.1647439540489923 0.11840220907028864 0.13586913066576994 0.6056764168623663 2.550171101929051 0.10011000393308216 0.021391560269822335 7.083586259609697e-12 11.149746813153321 0.1646819615218531 RENTLFDIHRS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 RENTLFDIHRSPAR 14 2 Q9ULI0-2;Q9ULI0;C9JG15 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 RENT(0.202)LFDIHRS(0.798)PAR 48.31399999999999 0.006148600000000001 4539100.0 713.79 765.18 737.05 759.16 759.58 932.38 720.0 974.91 708.17 1071.2 611.94 True False 786.2534353355746 829.6644039994436 787.0706452417013 806.0515890225462 706.2297212087439 924.7870064096032 747.3999939991172 955.4646552479006 678.4080776275126 1003.564249187864 536.6752594072701 1.465045055745537 1.5459337643322049 1.466567782742547 1.5019354346850051 1.3159349323997864 1.7231780116545383 1.3926484981338279 1.7803404172257942 1.264094190547891 1.8699655547681637 1.0 9.067905571544824 -9.292472990681226 1.4078216997226427 1.0733356378983292 1.515264349250477 0.0 0.2777176679931813 0.15331275264366978 0.6292922758109923 0.030809086573433477 0.026581101833726577 5.099493109762361e-10 9.292472990681226 0.44192871135214773 REPEEHQVEEEHRK ddPTM_A549_MK2206_60min_R1 3 REPEEHQVEEEHRK 14 2 F8W785;O00461 F8W785 GOLIM4 Golgi integral membrane protein 4 0 ;; 70.889 0.00048589 22234900.0 687.54 1122.98 804.51 850.3299999999999 1232.6100000000001 705.14 706.0799999999999 745.88 1450.08 1065.9099999999999 1554.93 False True 803.5799432608735 1180.1348853646057 918.6016153262068 1058.6608881727643 1051.2947018285938 779.7574467659507 834.3655963524416 851.6107741616993 1121.6391953019302 825.1201906933542 1168.7979671151768 0.6875268146164446 1.009699638918273 0.785937040593505 0.9057689335187222 0.8994665728444035 0.6671447664223317 0.7138663993502828 0.7286210261501755 0.9596519046575314 0.7059562164793228 1.0 10.190809858645599 -8.86275757210718 6.45817331905578 0.9822104686523877 0.8061265086866894 0.0 0.12975645933517677 0.16043127308113345 8.891245117120942 0.017473668614664803 0.01854460806162632 1.371647220866404e-09 8.86275757210718 -0.17608395996569826 REPEEHQVEEEHRK ddPTM_A549_PD325901_60min_R1 2 REPEEHQVEEEHRK 14 2 F8W785;O00461 F8W785 GOLIM4 Golgi integral membrane protein 4 0 ; 73.38600000000001 0.00022587 20269500.0 962.4200000000001 1032.82 919.51 902.55 1076.24 1146.37 1108.4099999999999 928.31 1033.18 1357.72 1195.8899999999999 False True 1060.1241699038428 1119.8593660821052 981.9134780628142 958.2984636602284 1000.6486152264392 1137.0343427977614 1150.591149095225 909.7941288048934 989.7590375802324 1271.993327490056 1048.8031113713105 1.010794264824148 1.067749851178348 0.9362228881824749 0.9137067322457242 0.9540862382817408 1.08412563852055 1.0970516168576452 0.8674594105802539 0.943703376590981 1.2128046853588412 1.0 10.034528155228845 -5.756236451310262 24.99989589730697 0.9743507996389432 1.0392720590949107 0.0 0.0973061001031807 205.48100400386866 987297.0261755416 0.009231912910357694 0.03367357458743764 1.752925862796339e-06 5.756236451310262 0.0649212594559675 REPES(ph)PPASAPIPLFGADTIGQR ddPTM_A549_MK2206_60min_R1 2 REPESPPASAPIPLFGADTIGQR 23 1 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 REPES(0.979)PPAS(0.021)APIPLFGADTIGQR;REPES(0.995)PPAS(0.005)APIPLFGADTIGQR 83.022 1.5344e-05 12473300.0 2109.31 2461.5 2445.83 1956.92 4306.4 2537.8 2766.3999999999996 2667.6000000000004 3927.0 2681.7 2949.8999999999996 True False 2465.309960321716 2586.7798360834367 2792.6854716700786 2436.3654878494785 3672.934264653586 2806.3483115447 3269.0190711383902 3045.740469182375 3037.5407701303925 2075.9021074784623 2217.3584169017645 1.1118229427998407 1.1666042875007332 1.2594650690582527 1.098769359648101 1.6564459027718421 1.2656268333316678 1.474285368671283 1.373589603722288 1.3698916453816425 0.9362050319221942 1.0 11.114626272951755 -10.74151842654803 0.991003819336736 0.9998132447709936 1.3141180561328871 0.4030446602762606 0.15717972968191332 0.4857627093104021 0.846586662543628 0.10688339854393145 0.027375183506432334 1.813349736176051e-11 10.74151842654803 0.3143048113618935 REPES(ph)PPASAPIPLFGADTIGQR ddPTM_A549_PD325901_60min_R1 2 REPESPPASAPIPLFGADTIGQR 23 1 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 REPES(0.995)PPAS(0.005)APIPLFGADTIGQR;REPES(0.992)PPAS(0.008)APIPLFGADTIGQR 89.65899999999999 4.5644e-07 16068800.0 4378.4 4672.9 4135.6 5173.200000000001 5321.6 4097.9 4709.9 5204.9 4031.8999999999996 4690.1 4733.9 True False 4822.891944792279 5066.701682543975 4416.266685383058 5492.736814810362 4947.829174523357 4064.5280610544146 4889.137821856172 5101.08418633494 3862.453264309936 4393.966285582528 4151.660310664565 1.1616778791857054 1.2204037188516845 1.0637350734208157 1.323021731980555 1.1917711961678645 0.9790126737039806 1.1776343573430643 1.2286853462532916 0.9303394245401703 1.0583636320860692 1.0 12.019472691708593 -8.765903757044029 24.998761825517033 0.9671047184363526 1.1664468268388446 0.4117980245327052 0.08971327611294282 62.86519785898397 352019.59739350167 0.014746480301301318 0.015959804808215395 1.7143371755557843e-09 8.765903757044029 0.199342108402492 REPGYT(ph)PPGAGNQNPPGMYPVTGPK ddPTM_A549_MK2206_60min_R1 2 REPGYTPPGAGNQNPPGMYPVTGPK 25 1 C9JXK9;C9JUT4;A0A087WZF1;Q93052 C9JXK9 LPP Lipoma-preferred partner 1 REPGY(0.006)T(0.994)PPGAGNQNPPGMYPVTGPK;REPGY(0.013)T(0.986)PPGAGNQNPPGMY(0.001)PVTGPK 68.733 8.939600000000001e-05 17384800.0 3204.7 4012.7000000000003 3342.5 3383.9 5296.700000000001 4430.9 3705.1 4479.1 5832.8 5614.9 5290.5 True False 3745.5750126074404 4216.929290372539 3816.5167607958206 4212.955651909042 4517.562446496062 4899.774897006623 4378.268710408776 5114.026141668456 4511.680113067622 4346.490190282588 3976.722839628052 0.9418747958200097 1.0604031159402987 0.9597140446309766 1.0594038915478166 1.1360013329263337 1.2321137515997733 1.1009740650717015 1.285990084777137 1.1345221417265292 1.0929829323205036 1.0 11.957364300708154 -6.482900589359067 5.056597034422109 1.1020034907296445 0.9956642187170032 0.3559569442990105 0.08085047475295529 0.2635228870572408 16.348349647738214 0.013828424917908156 0.03199164890415907 3.289269141102724e-07 6.482900589359067 -0.10633927201264137 REPGYT(ph)PPGAGNQNPPGMYPVTGPK ddPTM_A549_PD325901_60min_R1 5 REPGYTPPGAGNQNPPGMYPVTGPK 25 1 C9JXK9;C9JUT4;A0A087WZF1;Q93052 C9JXK9 LPP Lipoma-preferred partner 1 REPGY(0.108)T(0.889)PPGAGNQNPPGMY(0.003)PVTGPK;REPGY(0.4)T(0.588)PPGAGNQNPPGMY(0.011)PVT(0.001)GPK;REPGY(0.043)T(0.881)PPGAGNQNPPGMY(0.073)PVT(0.002)GPK;REPGY(0.042)T(0.957)PPGAGNQNPPGMY(0.001)PVTGPK;REPGY(0.018)T(0.956)PPGAGNQNPPGMY(0.023)PVT(0.003)GPK 60.028999999999996 0.00012506 28609000.0 8327.4 8975.9 9098.3 9097.599999999999 9842.2 9439.8 8668.0 9755.199999999999 8721.0 10104.699999999999 11817.0 True False 9172.791517692132 9732.330593923787 9715.765350522452 9659.538089851303 9150.917825746727 9362.925398555712 8997.865483311602 9560.624883193648 8354.486698094437 9466.687517521106 10363.583914134892 0.8850983977831609 0.9390892836453866 0.9374908748768965 0.9320654099858892 0.8829877677031968 0.9034447422947595 0.8682194844815617 0.9225211049001989 0.8061387611962839 0.9134569272517291 1.0 13.339235378811473 -4.135302790067825 14.188579634895406 0.9074862877516653 0.23249902397244848 0.0 0.04695701248234108 0.0 0.0 0.008776785912558956 0.0 7.323137860173708e-05 4.135302790067825 -0.6749872637792168 REPLPSR ddPTM_A549_MK2206_60min_R1 1 REPLPSR 7 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39;Q8IZ40 P38159 RBMX;RBMXL1;RCOR2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;REST corepressor 2 0 63.48 0.026768 4452900.0 282.34 218.06 347.55 221.4 452.08 219.77 185.23 336.57 451.53 509.81 360.58 False True 329.9920894497412 229.1583225904343 396.83781607018324 275.6430099390237 385.5796308667547 243.02591552848074 218.8838933440442 384.27982820239606 349.25917594524486 394.64356692157764 271.0380344982672 1.217512110654901 0.8454840038027922 1.4641406945146669 1.0169901447569196 1.4226034053874448 0.8966487525573996 0.8075763010502629 1.417807758655558 1.288598393918318 1.4560449704120793 1.0 8.082351507522777 -5.674926909961976 20.103923365900297 1.1475292440998117 1.0315744363987405 0.03394019863454778 0.2431976809644115 15.598499331080937 3615.4148838059773 0.030061667179639692 0.1164290977047988 2.113844761588167e-06 5.674926909961976 -0.11595480770107125 REPLPSR ddPTM_A549_PD325901_60min_R1 1 REPLPSR 7 1 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39;Q8IZ40 P38159 RBMX;RBMXL1;RCOR2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1;REST corepressor 2 0 81.548 0.015522999999999999 5869300.0 301.91 377.07 448.18 526.54 446.98 473.52 570.43 537.96 428.57 426.73 468.93 False True 332.55968094560484 408.84701222727995 478.59618992527766 559.063179940897 415.5856667972883 469.6638101150554 592.1380258012732 527.2299657785442 410.55869329232115 399.78619497380254 411.2545827921873 0.8086467479285255 0.9941457903069157 1.1637467640503327 1.359408997086847 1.010531393901304 1.1420269335998696 1.4398332579809545 1.2820038677719996 0.9983078863337121 0.9721136534442465 1.0 8.683887945302784 -8.800894065073718 23.367734745408843 0.9992007544327747 1.157024131485131 0.15231839060028274 0.16703895123763363 110.96375287834742 65719.54237723356 0.029881265000052355 0.031811145807379544 1.581633790950202e-09 8.800894065073718 0.15782337705235638 REPPS(ph)PQGR ddPTM_A549_MK2206_60min_R1 3 REPPSPQGR 9 1 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 REPPS(1)PQGR;REPPS(1)PQGR;REPPS(1)PQGR 76.52199999999999 0.00083064 12983900.0 1496.53 1792.14 1643.35 1142.25 2134.98 1532.44 1237.0700000000002 1431.69 1927.35 2248.5 2371.75 True False 1749.1076773543273 1883.3522711511557 1876.4017408687541 1422.1013012775509 1820.9272701909047 1694.601783648656 1461.8296061065535 1634.6364418667383 1490.8083023455085 1740.562288348929 1782.7790180300212 0.9811130037233101 1.0564137518469723 1.0525150463921134 0.7976879281701325 1.0213981944902164 0.9505394479688226 0.8199724089875602 0.9169035675958419 0.8362271976887289 0.9763197068990963 1.0 10.7999121713882 -6.219051369077354 24.99220744113712 0.9157215413823862 1.0326539655561644 0.3395955844493789 0.07147211341161097 463.1951452439939 273101.8587806522 0.010877146462491188 0.02877798492985516 6.038771975474638e-07 6.219051369077354 0.11693242417377825 REPPS(ph)PQGR ddPTM_A549_PD325901_60min_R1 2 REPPSPQGR 9 1 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 REPPS(1)PQGR;REPPS(1)PQGR 69.86399999999999 0.0015961999999999999 19007300.0 1237.1399999999999 1617.91 1540.62 1863.6399999999999 1884.76 1472.4299999999998 1448.38 1813.3200000000002 1705.12 1730.24 1940.69 True False 1362.7335420656666 1754.2569537556387 1645.175737700658 1978.7528101664689 1752.3809596690173 1460.4390182626098 1503.498893483947 1777.15191007798 1633.4597361145256 1620.9923511153952 1701.9974330475125 0.8006672134784735 1.030704817582805 0.9666146997383466 1.162606224748184 1.0296025867273435 0.858073572794772 0.8833731851121869 1.0441566335948578 0.9597310221495067 0.9524058730293891 1.0 10.733013145814978 -4.404147430090763 16.08734801631407 0.9790871810228644 0.9841953985616232 0.0 0.09555962858270962 0.0 0.0 0.011761881409145587 0.0 3.943234182511466e-05 4.404147430090763 0.005108217538758786 REPS(ph)YFEIPTK ddPTM_A549_PD325901_60min_R1 2 REPSYFEIPTK 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 REPS(0.999)Y(0.001)FEIPTK;REPS(0.988)Y(0.012)FEIPTK 61.657 0.0032093000000000004 7888800.0 1637.0900000000001 1816.92 1995.29 2357.58 2009.6299999999999 2465.7 2039.2 2190.79 2539.67 2363.0 2136.71 True False 1803.286171638039 1970.038224881295 2130.7023780534773 2503.2023621473386 1868.4805216471302 2445.620156700229 2116.8028718930564 2147.0929748084927 2432.936501840327 2213.7997767278985 1873.9082157206722 0.9623129652294773 1.05129920897628 1.137036680974285 1.335819087160921 0.9971035432642817 1.3050906849029884 1.129619291988093 1.1457834256747514 1.29832212774875 1.1813811146969704 1.0 10.871834575990318 -5.5789740078753685 2.7277460587841467 1.1573790667581165 0.9697546304407405 0.2681901570489372 0.10696717528595699 0.37067845641230546 5.074393490942906 0.017506991044296035 0.11281315186598277 2.6364891725516486e-06 5.5789740078753685 -0.18762443631737602 REPYGHLGPAELLEAS(ph)PAAR ddPTM_A549_MK2206_60min_R1 4 REPYGHLGPAELLEASPAAR 20 1 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 1 REPYGHLGPAELLEAS(1)PAAR;REPYGHLGPAELLEAS(1)PAAR;REPYGHLGPAELLEAS(1)PAAR;REPYGHLGPAELLEAS(1)PAAR 95.319 8.1568e-07 20337200.0 2664.85 3554.36 2891.2200000000003 2996.15 3829.46 2820.95 3238.06 2999.4700000000003 5000.28 4058.3100000000004 5291.18 True False 3114.6115306727443 3735.261742100963 3301.2384709493176 3730.206884502284 3266.151506854987 3119.461056604938 3826.3735878724588 3424.654057991623 3867.724563806366 3141.5349523812965 3977.2339768610072 0.7831099575215137 0.9391606739337427 0.8300337596820964 0.9378897259261355 0.8212118084721697 0.7843292787785501 0.9620690183513886 0.8610642667531714 0.9724659364543923 0.7898793409335002 1.0 11.957549721667615 -8.714903812653192 1.1584103169447457 0.9925828306641056 0.8604955916393886 0.0 0.08446195175198964 0.24870219239914693 0.6572399351236039 0.011274907725343574 0.012185731069869187 1.9279518678221612e-09 8.714903812653192 -0.13208723902471697 REPYGHLGPAELLEAS(ph)PAAR ddPTM_A549_PD325901_60min_R1 1 REPYGHLGPAELLEASPAAR 20 1 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 1 REPYGHLGPAELLEAS(1)PAAR 60.81399999999999 0.00052816 11314000.0 805.44 1085.3 1252.0 848.18 1558.8 936.08 1180.4 1696.0 1505.8 2132.6 2497.3 True False 887.2076758664106 1176.7620398606814 1336.9682488876067 900.5701522434574 1449.3152655680633 928.4568748363345 1225.3207679396648 1662.1719495137381 1442.516462560555 1997.9472720482077 2190.147931689015 0.405090296883374 0.537297970988278 0.6104465499992748 0.41119147214359575 0.661743092600311 0.4239242753435016 0.559469408532013 0.7589313605094664 0.658638826030397 0.912243069584535 1.0 11.096812603395533 -10.783821929455701 0.24200199707063477 1.2728598114532759 0.4540640586470309 0.7669551029887842 0.09088480915421586 1.7300553085374073 0.13300286788884824 0.42257318046280173 0.0695180569606678 1.6450460909962453e-11 10.783821929455701 -0.818795752806245 down REQGGSGLGS(ph)GSSGGGGSTSGLGSGYIGR ddPTM_A549_PD325901_60min_R1 2 REQGGSGLGSGSSGGGGSTSGLGSGYIGR 29 1 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 REQGGS(0.003)GLGS(0.995)GS(0.001)SGGGGSTSGLGSGYIGR;REQGGS(0.007)GLGS(0.974)GS(0.015)S(0.004)GGGGSTSGLGSGYIGR 148.33 3.3479e-36 18888000.0 6064.6 6753.6 5680.9 6001.9 6674.2 5858.1 5283.0 5483.8 5831.5 6194.7 7454.1 True False 6680.273727477448 7322.74957376126 6066.440036026842 6372.6237316961115 6205.427216740038 5810.393575846863 5484.047455968524 5374.421307042126 5586.422334587512 5803.565584805887 6537.2929554331 1.0218715564713245 1.1201501330417465 0.9279743278117992 0.9748107932657151 0.9492349905449393 0.8888072808513017 0.8388865992934842 0.8221172500117927 0.8545467325194098 0.8877628131966432 1.0 12.67447763471765 -5.79657076436088 10.395474046715853 0.9176407659051435 1.0709269551279188 0.5413484588518922 0.058009766240539065 0.29297015152088546 85.25726894472334 0.010016299408692354 0.03143377579197649 1.5974572166350411e-06 5.79657076436088 0.15328618922277526 REQGGSGLGSGSS(ph)GGGGSTSGLGSGYIGR ddPTM_A549_MK2206_60min_R1 2 REQGGSGLGSGSSGGGGSTSGLGSGYIGR 29 1 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 REQGGSGLGS(0.002)GS(0.143)S(0.855)GGGGSTSGLGSGYIGR;REQGGSGLGSGS(0.499)S(0.501)GGGGSTSGLGSGYIGR 191.62 2.6089999999999995e-67 51147000.0 4039.7 5693.6 4617.0 5045.8 7051.8 5258.1 3981.3999999999996 4981.2 7240.4 6265.7 8192.8 True False 4721.502598817451 5983.37992066815 5271.760025308689 6282.02122651457 6014.489561462972 5814.508651955699 4704.768843923646 5687.300354285217 5600.460960542933 4850.274018282357 6158.301650222987 0.766689075493158 0.9715957841154951 0.8560412147264341 1.0200898857052745 0.9766474432516947 0.9441740567783263 0.7639718076741646 0.9235176640103826 0.9094164720463386 0.7875992917798583 1.0 12.588316820869474 -10.483280193752355 0.8186258475681211 0.9997902289962208 0.9076344829092345 0.0 0.0997030900798909 0.9072324987972041 1.0987791665695645 0.04963409250362135 0.014466203613395684 3.286395341099129e-11 10.483280193752355 -0.09215574608698629 REQGGSGLGSGSS(ph)GGGGSTSGLGSGYIGR ddPTM_A549_PD325901_60min_R1 1 REQGGSGLGSGSSGGGGSTSGLGSGYIGR 29 1 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 REQGGSGLGS(0.002)GS(0.178)S(0.819)GGGGSTSGLGSGYIGR 93.993 7.297999999999999e-10 43158000.0 2483.1 2893.5 2499.1 2100.5 2887.2 2946.2 2544.4 2424.4 2934.2 2740.1 2437.0 True False 2735.1824840383924 3137.3453997391325 2668.703954309119 2230.243114418381 2684.4130322992764 2922.2071240094956 2641.2285343491035 2376.043440094993 2810.88577795536 2567.0896183716077 2137.2644494158208 1.2797585646390182 1.467925693798287 1.2486540704116222 1.0435035847005147 1.2560041566372415 1.3672651153712978 1.2357986561143761 1.1117217809637163 1.3151792136549412 1.2011099604792805 1.0 11.061549712199616 -10.928522116411779 0.7601739813107375 0.9657858664994768 1.2623969463423883 0.1197258778193746 0.12289924082314345 0.7196529191868082 0.5901144879799876 0.14053630790659452 0.021057457151591092 1.1789024862002243e-11 10.928522116411779 0.29661107984291146 REREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A549_MK2206_60min_R1 4 REREESEDELEEANGNNPIDIEVDQNK 27 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 REREES(1)EDELEEANGNNPIDIEVDQNK;REREES(1)EDELEEANGNNPIDIEVDQNK;REREES(1)EDELEEANGNNPIDIEVDQNK;REREES(1)EDELEEANGNNPIDIEVDQNK 265.05 1.0789999999999998e-138 56839900.0 3917.57 3396.5099999999998 3596.8 3387.3900000000003 5114.08 3929.88 3569.13 4353.610000000001 5042.87 4898.8 5819.04 True False 4578.760040609276 3569.3778513328275 4106.880324676261 4217.300702065715 4361.805606580811 4345.737293156783 4217.594721432967 4970.747549871448 3900.6679968086178 3792.1576776356387 4374.01177066614 1.0468101780878274 0.8160421229934708 0.9389275886769741 0.9641722343658533 0.997209389291728 0.9935358021441605 0.964239453976286 1.136427565926378 0.8917826931715287 0.8669747308563168 1.0 12.094741387411792 -6.183943726311717 4.4243766594329665 0.9698515347064428 0.9202999566453696 0.04248111641172725 0.08186755734032795 0.5160229726735736 18.846262152825325 0.010834530864484555 0.029865706777460414 6.547210040163742e-07 6.183943726311717 -0.04955157806107324 REREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_A549_PD325901_60min_R1 4 REREESEDELEEANGNNPIDIEVDQNK 27 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 REREES(1)EDELEEANGNNPIDIEVDQNK;REREES(1)EDELEEANGNNPIDIEVDQNK;REREES(1)EDELEEANGNNPIDIEVDQNK;REREES(1)EDELEEANGNNPIDIEVDQNK 249.5 6.058399999999998e-125 77544000.0 7858.2 9077.8 7928.0 8428.300000000001 9825.1 7644.6 7416.900000000001 8388.1 8216.199999999999 8977.0 9560.8 True False 8655.958679098912 9842.818064541876 8466.041754936856 8948.896948941885 9135.018870754931 7582.344912159056 7699.154188183411 8220.792765162852 7870.901686605147 8410.190687975592 8384.882210904703 1.032329192155099 1.173876724438788 1.0096792706195208 1.067265672176488 1.0894629931562618 0.9042875882380397 0.9182185264535393 0.9804303219038129 0.9387015212174221 1.0030183461656712 1.0 13.033574801911787 -7.246811667544146 24.83937096927469 0.9625851152699334 1.0760368527517303 0.5940201763069968 0.04808526595916546 413.09170992812216 701472.4560596974 0.006998989987951474 0.012087425559311993 5.664848928077209e-08 7.246811667544146 0.11345173748179693 REREES(ph)EDELEEANGNNPIDIEVDQNKESK ddPTM_A549_PD325901_60min_R1 1 REREESEDELEEANGNNPIDIEVDQNKESK 30 3 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 REREES(1)EDELEEANGNNPIDIEVDQNKESK 136.39 1.5730000000000002e-28 6603700.0 861.31 951.62 1018.6 1203.4 728.56 997.08 1078.7 1048.7 926.71 1383.6 1206.3 True False 948.7495571370902 1031.81635711068 1087.7283213393907 1277.7312848803047 677.3884589955529 988.9601110608204 1119.75051878729 1027.7828558107656 887.7636014208343 1296.2392598733468 1057.9327473657384 0.896795717402155 0.9753137519184576 1.0281639584820903 1.2077622968585353 0.6402944428010722 0.9348043280854473 1.0584326098000827 0.9715011264846029 0.839149372804059 1.225256769015794 1.0 10.04703220311043 RERPS(ph)GPESPVQGPR ddPTM_A549_PD325901_60min_R1 1 RERPSGPESPVQGPR 15 2 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 RERPS(0.608)GPES(0.392)PVQGPR 101.92 2.2479e-06 12796000.0 1387.4 1245.8 1582.8 1652.0 1635.1 1402.0 1602.1 1507.6 1423.0 1803.6 1760.5 True False 1528.2478266501018 1350.7879381354803 1690.2183261496034 1754.0402880357851 1520.2562167887743 1390.5825768316188 1663.0687922027585 1477.52973531068 1363.1962586157983 1689.7203881956984 1543.9696607289918 0.9898172648862369 0.8748798454353696 1.0947224995027167 1.1360587792946706 0.9846412500560269 0.9006540816190969 1.0771382589328429 0.9569681146539227 0.8829164803485577 1.094399994490753 1.0 10.592428688339407 -8.499390334191618 24.169099855272 0.9434069655917848 1.0070999606141646 0.0 0.08969148326164067 874.6999829141681 900049.5999863287 0.013896005528927304 0.016740205186684082 3.1667200063248537e-09 8.499390334191618 0.0636929950223798 RERPSGPES(ph)PVQGPR ddPTM_A549_PD325901_60min_R1 1 RERPSGPESPVQGPR 15 2 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 RERPS(0.011)GPES(0.989)PVQGPR 88.565 1.2050999999999999e-05 15054000.0 1102.3 877.62 968.81 956.28 1359.6 1084.8 1068.0 1174.1 1536.5 1101.5 1386.1 True False 1214.2046845296295 951.5801174076583 1034.559272527798 1015.3472437305444 1264.1063863653699 1075.9657484642942 1108.643324432025 1150.6816544363676 1471.9262483226798 1031.9511020168338 1215.618487211845 0.998836968426288 0.7827950359575497 0.8510558891718353 0.8352515648716031 1.0398874315121163 0.8851179541799666 0.9119993946248883 0.9465812395429942 1.2108455603523314 0.8489103389532414 1.0 10.247474805409889 -8.598615067987202 6.57263385134368 1.0993309778743336 0.8987032762565622 0.0745448133152885 0.11085099930478202 0.13732697845721173 9.614772844308517 0.016600388232097103 0.018837562709801272 2.519909431521596e-09 8.598615067987202 -0.20062770161777144 RERS(ph)DYDR ddPTM_A549_MK2206_60min_R1 1 RERSDYDR 8 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 RERS(0.999)DY(0.001)DR 42.843 0.024679 23256000.0 1216.6 1284.4 745.82 830.9 1551.0 1016.7 960.28 913.63 1465.8 1508.9 1121.6 True False 1421.9323369857448 1349.7704738840398 851.5884908112909 1034.4705373005181 1322.8499545972754 1124.2865191691606 1134.750445934345 1043.1398503745281 1133.7986404016121 1168.0384420234382 843.075765414766 1.6866008908300194 1.601007322538795 1.0100972246454467 1.2270196579444934 1.5690760058160087 1.3335533593662818 1.345964968375155 1.2373026164040395 1.3448360004083617 1.3854489595591697 1.0 9.719518478684005 -14.08182188940921 0.15716623422496045 3.7075680186537736e-11 1.4876034862199479 0.03979718078693273 0.20695183876275275 34.64421319762019 0.45922754850198905 11.24690807641844 0.3228770641418304 8.28281784677007e-15 14.08182188940921 1.4876034861828722 RERS(ph)LSRER ddPTM_A549_PD325901_60min_R1 1 RERSLSRER 9 3 P84103 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 RERS(0.975)LS(0.025)RER 44.611999999999995 0.01637 67178000.0 1119.2 949.71 1324.9 1081.3 1097.4 1263.4 1405.1 1206.8 1095.6 1514.3 1376.7 True False 1232.8203600885063 1029.745394707535 1414.8156812709185 1148.0894451895235 1020.3224098244755 1253.1112892789345 1458.571849400223 1182.729427283714 1049.5557420516297 1418.6868395679458 1207.3746276203358 1.0210752585701777 0.852879769999062 1.1718116721232057 0.9508974422067658 0.8450752454815709 1.0378810856318414 1.2080524271700013 0.9795877768400715 0.8692875583448711 1.1750179332193635 1.0 10.23765767372234 -8.527940192155672 24.886725846157923 0.9375464132084559 1.0110430023312262 0.0 0.1302483798217598 268.3863342232951 1319627.2507179377 0.019140684811269074 0.02174203713687083 2.9652397124291207e-09 8.527940192155672 0.07349658912277035 RERS(ph)PGRLFEDSSR ddPTM_A549_MK2206_60min_R1 2 RERSPGRLFEDSSR 14 3 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 RERS(1)PGRLFEDSSR;RERS(1)PGRLFEDSSR 55.589 0.004624199999999999 12153400.0 1697.4 2350.89 1761.48 1436.33 2343.6000000000004 1418.69 1772.35 1698.54 2891.5 2842.3 3077.8 True False 1983.8796225543335 2470.5402595369433 2011.2843511762521 1788.2309144793032 1998.8595445481467 1568.8148341497945 2094.3630533300043 1939.3132465605904 2236.5798667766826 2200.222455936918 2313.497317041342 0.8575240645152138 1.06788118634883 0.8693696493015258 0.7729556897719747 0.8639990761279225 0.6781139630436667 0.905280087382344 0.8382604260119552 0.9667527385062946 0.9510373924922949 1.0 11.175859710475434 -8.834949540964786 4.648016725730868 0.9855944961709446 0.8572066111995336 0.24773153688351268 0.08944593121733807 0.19732987229456314 7.887941083403601 0.01604056617029585 0.017063540255522824 1.4623470691684597e-09 8.834949540964786 -0.12838788497141107 RES(ph)AAS(ph)GLGGLLEEEGAGAGAAQEEVLEPGR ddPTM_A549_PD325901_60min_R1 2 RESAASGLGGLLEEEGAGAGAAQEEVLEPGR 31 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 RES(1)AAS(1)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(1)AAS(1)GLGGLLEEEGAGAGAAQEEVLEPGR 93.656 7.4251e-10 6123200.0 0.0 0.0 0.0 0.0 372.63 192.27 0.0 153.68 0.0 169.75 372.99 True False 0.0 0.0 0.0 0.0 346.4577543037126 190.70421686691535 0.0 150.6147318403723 0.0 159.03195603028374 327.11459457841886 0.0 0.0 0.0 0.0 1.059132671075783 0.582989019834754 0.0 0.46043415468662485 0.0 0.4861658839625976 1.0 8.3536523180618 -10.88479568750124 1.0331139727176002 1.0183808477655334 0.22900536858352347 0.18507847008355938 0.3589502830471199 0.45502757169056285 0.8285557385025449 0.2716260168145939 0.059328403688704574 1.3037799934728398e-11 10.88479568750124 -0.7893754791820099 RES(ph)AASGLGGLLEEEGAGAGAAQEEVLEPGR ddPTM_A549_MK2206_60min_R1 2 RESAASGLGGLLEEEGAGAGAAQEEVLEPGR 31 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RES(0.911)AAS(0.089)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(0.802)AAS(0.198)GLGGLLEEEGAGAGAAQEEVLEPGR 119.06 3.0159e-21 23651000.0 778.21 908.0699999999999 755.06 561.98 934.77 719.51 416.72 843.16 1256.98 992.53 1525.0900000000001 True False 909.5528225922045 954.2868843194329 862.1388617521297 699.6651252282406 797.266571282331 795.6480706279166 492.4326298889492 962.6805120692047 972.2760369845938 768.316783657978 1146.3680626572805 0.79342128607793 0.8324437110602999 0.7520611310068185 0.6103320111748554 0.6954717226108582 0.694059871821276 0.42955892259200823 0.8397656419681755 0.8481360120333941 0.6702182385271797 1.0 10.1628546070442 -9.061246243372343 1.2283809333104385 0.9540851716596831 0.6961459110783234 0.05944058186336687 0.13804961914632463 0.24946815468325342 0.7718015332927388 0.025602139439722962 0.02395346627572322 8.684678715744562e-10 9.061246243372343 -0.25793926058135974 RES(ph)AASGLGGLLEEEGAGAGAAQEEVLEPGR ddPTM_A549_PD325901_60min_R1 1 RESAASGLGGLLEEEGAGAGAAQEEVLEPGR 31 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RES(0.888)AAS(0.112)GLGGLLEEEGAGAGAAQEEVLEPGR 146.04 1.4263e-36 26396000.0 1823.6 1898.4 1691.3 2099.4 2214.4 1807.7 2357.5 2078.9 1957.9 2528.3 2965.6 True False 2008.730529536634 2058.3848304353796 1806.0817886131065 2229.075169916663 2058.86818326528 1792.9786905410251 2447.215952573501 2037.4347086344994 1875.6162717806553 2368.662706517622 2600.850000487302 0.7723361705443501 0.7914277371050676 0.694419819779962 0.8570564121341168 0.7916135812828595 0.6893818137167034 0.9409292931599224 0.7833726313523502 0.721155111378678 0.9107263802502348 1.0 11.344767481408068 -10.864757560065637 0.9966783787045919 1.0062410797058394 0.7801187416102456 0.44326011578109814 0.07256913590005114 0.3209090030095396 0.5397173278823226 0.05361854583270873 0.011626705674136435 1.3653451122020654e-11 10.864757560065637 -0.2261223380955938 RES(ph)ASSSSSVK ddPTM_A549_MK2206_60min_R1 3 RESASSSSSVK 11 1 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 RES(0.999)AS(0.001)SSSSVK;RES(0.999)AS(0.001)SSSSVK;RES(0.999)AS(0.001)SSSSVK 142.66 1.1933e-11 72403000.0 15674.4 14534.6 13048.5 10450.9 14386.0 12962.1 11369.5 14193.900000000001 15689.8 20091.2 18185.4 True False 18319.855517712775 15274.349057703961 14898.973508824005 13011.37096915873 12269.838457018965 14333.740818454393 13435.190980808244 16205.928791995691 12136.085351462138 15552.583966055605 13669.463288492958 1.3402029861065976 1.1174066410172816 1.089945756785203 0.951856755057222 0.8976093792466449 1.0485957287379841 0.9828616308672539 1.1855570661386499 0.8878245689191303 1.1377611276916682 1.0 13.738668978292216 -5.056613184053635 0.9944654608392113 0.9694881068260566 1.6559635404049178 0.4511390232190958 0.09526106157734626 1.3114122015474097 0.762290728576301 0.012831952992653477 1.0542281339447073 8.777822932489343e-06 5.056613184053635 0.6864754335788612 RES(ph)ASSSSSVK ddPTM_A549_PD325901_60min_R1 3 RESASSSSSVK 11 1 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 RES(0.999)AS(0.001)SSSSVK;RES(0.992)AS(0.002)S(0.004)S(0.002)S(0.001)SVK;RES(0.983)AS(0.007)S(0.007)S(0.002)S(0.001)SVK 159.75 1.0115e-13 81170000.0 15116.3 16471.5 16612.0 16694.9 19718.3 15145.4 14679.300000000001 15913.6 16590.8 20971.699999999997 19390.6 True False 16650.895647968104 17859.61111173428 17739.39021607102 17726.10605613112 18333.3546324421 15022.060883841363 15237.928794321186 15596.190764022302 15893.54637206112 19647.543282947292 17005.679127140902 0.9791373530853839 1.050214518232942 1.0431450625079197 1.0423639022942885 1.0780724777514026 0.883355540906702 0.8960494126930572 0.9171166083647274 0.9346022733485058 1.1553518760441621 1.0 14.053729001225564 -7.248550972640587 24.98670664122707 0.9526160746299354 1.0396957455224014 0.19573469490126982 0.07273758511753114 559.1416491168018 1084005.4938039288 0.006995332284984997 0.012067107811036969 5.642207155265361e-08 7.248550972640587 0.08707967089246604 RES(ph)ASSSSSVKK ddPTM_A549_PD325901_60min_R1 1 RESASSSSSVKK 12 2 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 RES(0.98)AS(0.006)S(0.006)S(0.006)S(0.001)S(0.001)VKK 45.33 0.016528 5470600.0 1423.8 1131.3 1152.7 1084.2 1686.3 1555.6 963.85 1046.1 2099.0 1415.3 1872.2 True False 1568.3431278538385 1226.6386212976956 1230.929153748198 1151.1685716031461 1567.8601054191845 1542.9317093575366 1000.5298391889573 1025.2347148504257 2010.7863294691222 1325.9377164633906 1641.9312688536309 0.9551819601735398 0.7470706262595963 0.7496837273874516 0.7011064308476644 0.9548877807253396 0.9397054180195897 0.6093615842321528 0.6244078143211363 1.2246470772634837 0.8075476371122028 1.0 10.681178021912173 -8.765996909893074 24.999999246789585 1.1060833471999614 0.7848677168811419 0.2417819298808972 0.15449493812523754 65.57969397808472 359731.70773413026 0.02433111661462166 0.026327707875345736 1.7139695027593658e-09 8.765996909893074 -0.3212156303188195 RES(ph)CGSSVLTDFEGK ddPTM_A549_MK2206_60min_R1 2 RESCGSSVLTDFEGK 15 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(0.744)CGS(0.256)SVLTDFEGK;RES(0.991)CGS(0.009)SVLTDFEGK 123.58 1.3051e-07 27406000.0 7054.8 7291.3 6042.299999999999 5730.5 7092.1 6898.299999999999 6307.700000000001 7183.2 7792.9 8957.1 8167.8 True False 8245.477766699843 7662.396026339695 6899.188997384167 7134.472757251918 6048.861484848062 7628.273527279053 7453.7274418087145 8201.440597627387 6027.820592704134 6933.684889023878 6139.509840187883 1.3430189023766614 1.2480468678758903 1.123736125028026 1.1620590149642283 0.9852352455327203 1.2424890139186764 1.2140590431207148 1.3358461523984468 0.9818081165449632 1.1293547969640019 1.0 12.583907764466364 -8.78674540974548 24.94064067645266 0.9914093386250471 1.197969881819572 0.3254835624748166 0.10271267780296263 130.52688008237791 128641.5702710018 0.016539267397966777 0.01761066986948718 1.6340095492788063e-09 8.78674540974548 0.206560543194525 RES(ph)CGSSVLTDFEGK ddPTM_A549_PD325901_60min_R1 2 RESCGSSVLTDFEGK 15 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(0.985)CGS(0.015)SVLTDFEGK;RES(0.985)CGS(0.008)S(0.007)VLTDFEGK 107.92 1.6535e-06 40152000.0 9662.8 9916.7 9399.6 7589.2 9034.599999999999 8152.6 8453.3 8688.5 8491.5 9934.9 10301.5 True False 10643.760342622609 10752.415111661672 10037.513380386536 8057.967647676257 8400.040863677978 8086.20792858592 8774.99495732325 8515.201051503605 8134.631784986687 9307.608718499352 9034.480806588866 1.1781263993455042 1.190153074852947 1.1110227134542314 0.8919126422626925 0.9297757163368823 0.8950384755578462 0.9712782776541654 0.9425224574381131 0.9003983692183045 1.0302317219724781 1.0 13.141225979356618 -6.10009398507866 3.9345960894453564 0.9437276748721666 1.1791346359888213 0.8431872018939759 0.04181611044513385 0.06287827858785877 1.7270946705932118 0.006011879434318989 0.017428039204058252 7.94156353829355e-07 6.10009398507866 0.2354069611166547 RES(ph)CGSSVLTDFEGKDVATK ddPTM_A549_MK2206_60min_R1 2 RESCGSSVLTDFEGKDVATK 20 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(1)CGSSVLTDFEGKDVATK;RES(1)CGSSVLTDFEGKDVATK 241.59 3.848e-86 51577000.0 7110.3 6762.299999999999 6837.4 5217.1 7863.2 7535.4 6438.700000000001 6101.200000000001 9781.2 9503.4 9467.3 True False 8310.34480985512 7106.472185881377 7807.046133213268 6495.289734204518 6706.533696318054 8332.791026406301 7608.528446117243 6966.063784141366 7565.77381736679 7356.575339602048 7116.3081258124275 1.1677887835845187 0.9986178310779752 1.0970640949195807 0.9127330659903078 0.9424175538425563 1.1709429776068043 1.069167932529428 0.9788873192370505 1.0631599536737386 1.0337629019910082 1.0 12.796913263220734 -10.527153783215796 0.004639312293576917 3.35541296048123e-05 2.049761116449242 0.03293259376107949 0.07896287547190632 50833.55103414398 58.68607857913691 13230.193155138379 12700.309493705287 2.970613954226183e-11 10.527153783215796 2.0497275623196374 RES(ph)CGSSVLTDFEGKDVATK ddPTM_A549_PD325901_60min_R1 2 RESCGSSVLTDFEGKDVATK 20 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(1)CGSSVLTDFEGKDVATK;RES(1)CGSSVLTDFEGKDVATK 207.72 1.0274000000000001e-57 80998000.0 5902.299999999999 6345.299999999999 7181.0 6124.5 5609.299999999999 6375.5 6661.1 7222.1 5718.200000000001 6279.6 7280.5 True False 6501.497150956388 6880.04069983229 7668.345842860945 6502.796455251304 5215.322119034472 6323.580041790292 6914.591805593783 7078.049549872151 5477.883939576145 5883.104984316758 6385.044654892027 1.0182383213209227 1.0775242886611625 1.2009854679693885 1.0184418131311046 0.8168027634761569 0.9903736596337438 1.0829355438095538 1.1085356379534739 0.8579241392429663 0.9213882286334995 1.0 12.640480994357667 -6.51931069805849 24.974832760304157 0.9528827165854223 1.0989329951354203 0.2743772805198317 0.0907937909037966 136.32288664236853 954200.6292842373 0.014237025980489185 0.030133129434345145 3.0247487222635497e-07 6.51931069805849 0.14605027854999797 RES(ph)DESGESAPDEGGEGAR ddPTM_A549_MK2206_60min_R1 4 RESDESGESAPDEGGEGAR 19 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 RES(0.999)DES(0.001)GESAPDEGGEGAR;RES(0.763)DES(0.208)GES(0.029)APDEGGEGAR;RES(0.993)DES(0.007)GESAPDEGGEGAR;RES(0.633)DES(0.184)GES(0.184)APDEGGEGAR 99.838 8.7172e-08 91422300.0 329.13 383.76 178.39 191.41 793.31 145.03 172.78 178.67 532.55 730.07 643.74 True False 384.67909754407196 403.29174482851073 203.6883844303265 238.30545859272144 676.6151498914022 160.37697833687744 204.17188949945455 203.99701965392666 411.9282753075987 565.1466799443641 483.8815916798343 0.794986013434872 0.8334513066067478 0.42094675212422467 0.4924871346426399 1.3983072750142813 0.33143847812047517 0.42194597399470235 0.42158458424866796 0.8512997443807611 1.1679441616747839 1.0 8.918510245547871 -8.954803231665124 6.429888076428459 0.935622344161673 0.6404113169516588 0.23010429554093892 0.29469024278498146 0.2470626929164999 23.30507787899332 0.05040846244007701 0.05279886770590016 1.1096774694292368e-09 8.954803231665124 -0.29521102721001424 RES(ph)DESGESAPDEGGEGAR ddPTM_A549_PD325901_60min_R1 3 RESDESGESAPDEGGEGAR 19 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 RES(0.998)DES(0.002)GESAPDEGGEGAR;RES(0.983)DES(0.014)GES(0.003)APDEGGEGAR;RES(0.983)DES(0.016)GES(0.002)APDEGGEGAR 91.11399999999999 2.0085e-06 93028300.0 579.71 285.53999999999996 551.97 188.34 518.29 370.4 272.14 261.94 202.72 587.95 433.83 True False 638.5617324400538 309.6034579027169 589.4300034652495 199.97333404882536 481.8870984034332 367.3835852057286 282.4964366207219 256.7154012120454 194.20038337778965 550.8267366598255 380.47166027495507 1.6783424341739015 0.8137359236663674 1.5492086928085174 0.5255932436710551 1.266551884719057 0.9656003943637533 0.7424900882672063 0.6747293636181079 0.5104201012959731 1.447747083874158 1.0 8.571645187252713 -7.580976618789031 3.4628348375936078 0.7527117721605412 1.1332514999320233 0.07815628253482942 0.3778117029573632 0.26715090085680837 6.568320060020178 0.04875570178888748 0.07503893262893102 2.6243598278391924e-08 7.580976618789031 0.38053972777148215 RES(ph)DGAPGDLTSLENER ddPTM_A549_PD325901_60min_R1 2 RESDGAPGDLTSLENER 17 1 Q9BX66-7;Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-3;Q9BX66-5;Q9BX66-2;Q9BX66-11;Q9BX66;Q9BX66-12;A0A0U1RQI5 Q9BX66-7 SORBS1 Sorbin and SH3 domain-containing protein 1 1 RES(1)DGAPGDLTSLENER;RES(1)DGAPGDLTSLENER 69.72 0.00059662 4699500.0 735.73 799.73 837.98 768.0 802.7 806.71 745.49 737.29 877.39 783.71 607.47 True False 810.4207679842 867.1260537526788 894.8503619830963 815.4376157454492 746.3211211646683 800.1404212238482 773.8600298977813 722.5841725571845 840.5163495059137 734.2264168512143 532.7550410696056 1.5211883614599468 1.6276261825918357 1.679665686853974 1.5306051616298277 1.4008710638688444 1.5018917880484366 1.4525625667363227 1.3563159742354787 1.5776788293141621 1.3781688773458007 1.0 9.057328529010695 -12.755643471607037 0.3101390355491663 4.417947014961429e-12 1.5612509919117499 0.30625629547563626 0.14495827727014482 3.6724593285390865 0.16286678635158924 2.4216708997457994 0.0356014499135163 1.7553209183388486e-13 12.755643471607037 1.5612509919073319 RES(ph)EALDSPNSK ddPTM_A549_MK2206_60min_R1 4 RESEALDSPNSK 12 1 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 RES(1)EALDSPNSK;RES(1)EALDSPNSK;RES(1)EALDSPNSK;RES(0.999)EALDS(0.001)PNSK 114.58 1.1826e-05 72166400.0 12645.8 12538.3 11193.3 10473.4 13946.5 10274.800000000001 9018.199999999999 10993.7 13183.2 16412.8 16832.4 True False 14780.101879873682 13176.445914590666 12780.678252390684 13039.383470168797 11894.988324816835 11362.07251613975 10656.69020652842 12552.090641794224 10197.226249244459 12705.137080815346 12652.450529393294 1.168161206837962 1.0414145373641306 1.0101346156382514 1.030581660041002 0.9401331621240664 0.8980135895211897 0.8422629420104458 0.9920679486265589 0.8059487152749557 1.0041641381090292 1.0 13.627129213023649 -5.581283859604654 0.6744352936190835 0.9074975337058943 1.235587902632736 0.5348150385657016 0.06540235567676726 1.3429236899925718 0.5365219352146855 0.012955264160146177 0.3081272755042386 2.6225038859762007e-06 5.581283859604654 0.32809036892684185 RES(ph)EALDSPNSK ddPTM_A549_PD325901_60min_R1 2 RESEALDSPNSK 12 1 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 RES(1)EALDSPNSK;RES(1)EALDSPNSK 139.71 2.5473e-09 22186800.0 5073.1 5070.799999999999 5714.6 5397.1 5844.2 5987.5 5477.4 7228.0 10455.7 12680.1 13778.4 True False 5588.11737738117 5498.134111974149 6102.427120681402 5730.466609296567 5433.723553395484 5938.739785149299 5685.845454348288 7083.831869743692 10016.283289676183 11879.476322000597 12083.744148473921 0.4624491638286552 0.455002526072891 0.5050112817435057 0.474229389408272 0.44967217831086886 0.4914652041767463 0.4705367297160428 0.5862282238604267 0.8289056079477782 0.9830956511522034 1.0 13.56077992258134 -8.822507605559164 1.1728298870256306 0.9487514014881079 0.4648980376830707 0.9728995392211046 0.03418154577524836 0.0540241554548604 0.14800808462224735 0.009355863535243357 0.00966217033735966 1.5048471650153028e-09 8.822507605559164 -0.4838533638050372 down RES(ph)EDDPES(ph)EPDDHEK ddPTM_A549_MK2206_60min_R1 4 RESEDDPESEPDDHEK 16 1 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 2 RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK 183.05 1.2952000000000001e-34 127638200.0 5891.700000000001 5037.57 4953.63 4646.55 7186.129999999999 5958.6 5608.549999999999 6131.610000000001 6933.08 8439.85 7583.98 True False 6886.074921764682 5293.960795798833 5656.129221176065 5784.954958591555 6129.0597964088465 6589.135097001435 6627.5509367528975 7000.784494768086 5362.748449853736 6533.282023269607 5700.668458800178 1.2079416600933142 0.9286561451625016 0.9921870149183368 1.0147853712947055 1.075147562203404 1.1558530626052672 1.1625918933282082 1.2280637867934427 0.9407227395543778 1.146055426742826 1.0 12.476915383878458 -8.823518415097162 24.99998570824551 0.9720078485266371 1.0874995548975734 0.0 0.10286198056548256 69.44757650876154 27966.83232848928 0.016191341789883042 0.017236996727721283 1.501348743722248e-09 8.823518415097162 0.11549170637093631 RES(ph)EDDPES(ph)EPDDHEK ddPTM_A549_PD325901_60min_R1 5 RESEDDPESEPDDHEK 16 1 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 2 RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK 155.11 8.8135e-21 277993900.0 7978.53 7856.97 7088.62 6896.24 8164.89 7361.299999999999 7677.200000000001 7217.16 7865.7699999999995 8423.289999999999 9633.54 True False 8788.504492116646 8519.10443593861 7569.696380534877 7322.205082302602 7591.416293741358 7301.352013431235 7969.360047125039 7073.208082047508 7535.199040851998 7891.442031872337 8448.675652041558 1.040222734789561 1.0083360738176799 0.8959624788893058 0.8666689767565224 0.8985332857353743 0.8642007711193077 0.9432673682057263 0.8371972571036409 0.8918793135384685 0.9340448558899797 1.0 13.044509498249582 -5.646237141685726 4.990336214072221 0.9231132888725843 1.0322790946241973 0.47452663398510175 0.04569410501583225 0.18063480177299404 6.939582726448742 0.008177276000946 0.03380924796957357 2.258202367148385e-06 5.646237141685726 0.10916580575161305 RES(ph)EDDPES(ph)EPDDHEKR ddPTM_A549_MK2206_60min_R1 2 RESEDDPESEPDDHEKR 17 2 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 2 RES(1)EDDPES(1)EPDDHEKR;RES(1)EDDPES(1)EPDDHEKR 60.747 0.0011262 28579400.0 593.48 928.5 493.23 516.45 874.27 440.64 574.0999999999999 547.61 851.3 903.53 926.47 True False 693.644914807085 975.7566840558487 563.1774306439262 642.9802731843213 745.6660411384655 487.2682323268407 678.4065387292322 625.23539448529 658.4819092467538 699.4219454711618 696.4019297287973 0.9960410578948482 1.4011401209583692 0.8086959650775906 0.923289045788141 1.0707409174309057 0.6996939720092383 0.9741594756829967 0.8978082452022758 0.9455486567982216 1.0043365987563255 1.0 9.443776390475268 -5.770714823088564 24.999937591955828 0.9451455093831944 1.1985906271605165 0.3889379127440853 0.13030211587775342 122.01283057471855 328862.5365194641 0.01609191651571343 0.05103507189129893 1.6954507427396122e-06 5.770714823088564 0.25344511777732204 RES(ph)EDDPES(ph)EPDDHEKR ddPTM_A549_PD325901_60min_R1 3 RESEDDPESEPDDHEKR 17 2 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 2 RES(1)EDDPES(1)EPDDHEKR;RES(1)EDDPES(1)EPDDHEKR;RES(1)EDDPES(1)EPDDHEKR 77.045 0.0001301 87441000.0 1683.4100000000003 1542.3 1542.9699999999998 2065.9700000000003 1946.6999999999998 1570.5499999999997 1980.52 1716.52 1180.25 1888.48 1748.7000000000003 True False 1854.3085439390566 1672.27503370232 1647.685222832357 2193.5802747417 1809.9705077504163 1557.7599615141933 2055.8897723821296 1682.28266201611 1130.648196929934 1769.2410505099874 1533.6209859226285 1.2091048316109876 1.0904095921041905 1.0743757668659624 1.4303275026078488 1.1801941446840176 1.0157398573788052 1.3405461918254227 1.0969350820431336 0.7372409528223394 1.153636437392391 1.0 10.58272626861657 -8.590219877909444 6.2981971469238305 0.8766707848954766 1.187468135467961 0.26021108687872774 0.14962752237928711 0.12293680637146966 8.85052671509214 0.023712752168755468 0.0269289939149035 2.569094752641285e-09 8.590219877909444 0.3107973505724845 RES(ph)EDDPESEPDDHEK ddPTM_A549_MK2206_60min_R1 2 RESEDDPESEPDDHEK 16 1 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 RES(1)EDDPESEPDDHEK;RES(0.999)EDDPES(0.001)EPDDHEK 67.995 0.00087373 2723000.0 187.48 407.45000000000005 338.05 262.65999999999997 489.25 441.65999999999997 317.34000000000003 411.52000000000004 579.6800000000001 492.65000000000003 576.4200000000001 True False 219.12204055407474 428.1874646403396 385.9905732197536 327.0117117912554 417.28197310555595 488.3961680498195 374.99657028450594 469.85422022714425 448.3834055587435 381.36002283971527 433.27900561731417 0.505729651594544 0.9882488167878792 0.8908591651465172 0.7547370344550748 0.9630791422977755 1.1272094002200204 0.8654852079671611 1.0844149246458863 1.03486067809796 0.8801719397790176 1.0 8.75915252279442 -4.5878000205541785 0.5829032457051314 1.0140122012055606 3.2263529347786874e-20 0.48153259801544723 0.11898235702341751 3.8906436849293535 0.5115586987869527 0.018303162041642323 3.1838563094674877 2.583449516989637e-05 4.5878000205541785 -1.0140122012055606 RES(ph)EDDPESEPDDHEK ddPTM_A549_PD325901_60min_R1 2 RESEDDPESEPDDHEK 16 1 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 RES(0.982)EDDPES(0.018)EPDDHEK;RES(0.997)EDDPES(0.003)EPDDHEK 57.989 0.0032283999999999998 4217800.0 930.6300000000001 1132.57 1035.7 878.1600000000001 1371.3400000000001 1033.8400000000001 757.3199999999999 1088.33 1154.9 911.5 1018.44 True False 1025.1068725064038 1228.01564865476 1105.9888301700441 932.401948753937 1275.0218092661723 1025.4207498085602 786.1402270214049 1066.6224043716315 1106.363569272935 853.9477344424367 893.1783364230809 1.147706824833726 1.3748829305159875 1.2382620413737389 1.0439146480958497 1.4275108981844133 1.1480582409948183 0.8801604281734683 1.1941874997138238 1.238681598238935 0.9560775263115413 1.0 9.802804449540115 -7.509195687631012 24.852444991483125 1.1030808448522451 1.246473044009359 0.2786743701182549 0.13775242260062337 791.5148596480016 1437623.8470657167 0.021217778363354683 0.0330803168508396 3.0960239554253244e-08 7.509195687631012 0.14339219915711388 RES(ph)FLYR ddPTM_A549_MK2206_60min_R1 2 RESFLYR 7 1 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;E9PMG3;B7Z6T1;V9GYP2;P27815-7;P27815-2;P27815-6;Q08493;Q08493-3;Q08493-2;P27815;Q07343-3;Q07343;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q07343-3;Q08499-6 PDE4D;PDE4B;PDE4C;PDE4A cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4A;cAMP-specific 3,5-cyclic phosphodiesterase 4C;cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 RES(1)FLYR;RES(1)FLYR 116.52 0.0029785 21772000.0 1572.8 1391.44 1527.98 1166.0900000000001 2379.71 1420.35 1371.08 1680.5700000000002 2319.9 1955.69 1787.96 True False 1838.250188731859 1462.2583526792346 1744.670540063065 1451.7821023477693 2029.657811382774 1570.6504942479755 1620.1874884530157 1918.795944029773 1794.4463541190476 1513.8982707143066 1343.96018681436 1.367786193941603 1.0880220761191455 1.298156416521924 1.0802270160911416 1.5102067987547676 1.1686733801028348 1.2055323545658059 1.4277178467451241 1.335193089590319 1.1264457724024974 1.0 10.392274685326196 -10.78816745974503 1.0406348370948286 1.0002888708151834 1.2739566376297973 0.2605144795158557 0.1327968583070638 0.41831421680612946 0.8057786025896629 0.08318957100862567 0.02100989454154308 1.6286679129794204e-11 10.78816745974503 0.2736677668146139 RES(ph)FLYR ddPTM_A549_PD325901_60min_R1 3 RESFLYR 7 1 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;E9PMG3;B7Z6T1;V9GYP2;P27815-7;P27815-2;P27815-6;Q08493;Q08493-3;Q08493-2;P27815;Q07343-3;Q07343;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q07343-3;Q08499-6 PDE4D;PDE4B;PDE4C;PDE4A cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4A;cAMP-specific 3,5-cyclic phosphodiesterase 4C;cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 RES(1)FLYR;RES(1)FLYR;RES(1)FLYR 102.07 0.0045031 39271500.0 4525.5 4440.17 4316.879999999999 4108.96 4860.8 4965.9 4529.3 5142.6 4853.200000000001 4753.5 4592.34 True False 4984.925428502983 4814.358708677973 4609.84943630825 4362.761127074769 4519.394176849653 4925.459356838899 4701.66499002806 5040.026808708343 4649.236881457618 4453.363198762612 4027.511293241789 1.2377185476469665 1.1953681462685213 1.1445900708071586 1.0832399487980415 1.122130727338555 1.222953580565715 1.1673871648522771 1.2513997954929554 1.1543696697409866 1.1057357446111715 1.0 11.975672918952363 -10.322703213680612 0.7850077562959689 1.0027229214135343 1.1737870908557542 0.3673784290303217 0.05638952514537322 0.32563195229510256 0.37632515542575384 0.03091549828917116 0.010298053389103397 4.7566016952826864e-11 10.322703213680612 0.17106416944221992 RES(ph)GAAEQVDNK ddPTM_A549_MK2206_60min_R1 2 RESGAAEQVDNK 12 1 Q9P2R3;Q9P2R3-2;Q9P2R3-4 Q9P2R3 ANKFY1 Rabankyrin-5 1 RES(1)GAAEQVDNK;RES(1)GAAEQVDNK 86.79799999999999 0.000118 26971000.0 3454.9 4236.3 3992.2 3338.1 4919.200000000001 4194.2 3028.3999999999996 4290.1 5146.4 5911.8 5967.5 True False 4038.002655804742 4451.909575299722 4558.353990261501 4155.934649853001 4195.592196424836 4638.027460115365 3578.6210797554586 4898.234812880229 3980.748617112055 4576.320274076583 4485.605055378583 0.90021359570274 0.9924880858517722 1.0162183103471598 0.9265048078340554 0.9353458774516944 1.0339803444251108 0.797801196399228 1.09198976557396 0.8874496456924654 1.0202236303861005 1.0 12.131086885529884 -6.324370682740138 24.995848462523977 0.9498228099677274 0.971926746130134 0.0 0.07980063326543194 956.3358916631156 379848.2495502204 0.01042716976736366 0.024230568222387703 4.7383737888153475e-07 6.324370682740138 0.02210393616240658 RES(ph)GEEFR ddPTM_A549_MK2206_60min_R1 4 RESGEEFR 8 1 D6REW6;A0A3B3IRQ7;P30533 D6REW6 LRPAP1 Alpha-2-macroglobulin receptor-associated protein 1 RES(1)GEEFR;RES(1)GEEFR;RES(1)GEEFR;RES(1)GEEFR 93.44200000000001 0.0011272 44578700.0 2575.41 3155.7700000000004 2549.63 2402.91 3502.77 2861.2300000000005 2785.21 2924.64 3913.4799999999996 4381.96 4092.96 True False 3010.0762452708004 3316.385213616503 2911.2058724989834 2991.623057870728 2987.5171730913617 3164.0034594692393 3291.246604657804 3339.2166763343616 3027.083028543387 3392.072192596607 3076.5650720506615 0.9783886167778849 1.077950615686471 0.946252006481547 0.9723906329979506 0.9710560651655759 1.0284207827141119 1.0697796170662655 1.0853717045252131 0.9839164645153133 1.102551746235501 1.0 11.587104791789654 -5.755084278232516 24.994728792148415 1.0009554601904158 1.0281695670830169 0.0 0.05468001943285377 397.0202815680884 1561442.935528293 0.006351508183104191 0.023378922026957922 1.7575825082645186e-06 5.755084278232516 0.027214106892601064 RES(ph)GEEFR ddPTM_A549_PD325901_60min_R1 1 RESGEEFR 8 1 D6REW6;A0A3B3IRQ7;P30533 D6REW6 LRPAP1 Alpha-2-macroglobulin receptor-associated protein 1 RES(1)GEEFR 99.34299999999999 0.0010088 22051000.0 1188.1 1077.1 784.7 1101.1 1203.0 996.9 1215.5 1017.2 1242.2 1083.9 1080.8 True False 1308.7150373670074 1167.8709970827786 837.9544607844286 1169.1124462204605 1118.505430124698 988.781576921141 1261.756517647121 996.9111480220369 1189.9946538668619 1015.4623690204686 947.8684517556903 1.3806926846683616 1.2321024029437717 0.8840408806014449 1.233412130190609 1.180021793164384 1.043163294536989 1.3311515066357902 1.0517399816140174 1.2554428324549605 1.0713114959566143 1.0 9.888543040914596 -10.979568291538481 1.2166011065568196 0.9988189427156491 1.177177619069745 0.13382476963225653 0.1352284586282568 0.6261343839543964 1.63027825318488 0.09397078959342207 0.021017649166082154 1.0481699589576592e-11 10.979568291538481 0.17835867635409586 RES(ph)GYHENGVVK ddPTM_A549_PD325901_60min_R1 2 RESGYHENGVVK 12 1 Q15035 Q15035 TRAM2 Translocating chain-associated membrane protein 2 1 RES(0.916)GY(0.084)HENGVVK;RES(0.998)GY(0.002)HENGVVK 70.197 0.0013373 10644800.0 6397.1 6126.7 6530.2 7098.8 8271.4 7631.7 6308.0 7098.1 7729.9 7692.3 8466.6 True False 7046.528882703888 6643.018510655523 6973.378641282625 7537.276753455463 7690.445398780907 7569.549965482068 6548.05439187005 6956.522827148271 7405.039184451339 7206.606865223871 7425.261874199414 0.9489939886414631 0.8946510740231324 0.9391424517313054 1.0150856469648926 1.0357136932103268 1.0194320542126618 0.8818617447854061 0.9368723884769813 0.9972765014768916 0.9705525525321465 1.0 12.858226192453813 -6.102854101146565 5.14780768923031 0.9908151389010567 0.9206755352875274 0.2296370732138907 0.04290998895146511 0.20477143132764408 8.19457120303409 0.00622116303736628 0.017120266827403936 7.891251753759215e-07 6.102854101146565 -0.07013960361352922 RES(ph)INDR ddPTM_A549_PD325901_60min_R1 2 RESINDR 7 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 RES(1)INDR;RES(1)INDR 52.167 0.038567000000000004 15362000.0 2720.8 2932.4 2770.8 2728.6 3043.8 2216.1000000000004 2370.4 2194.4 2563.1 2869.1 2531.9 True False 2997.0136130529036 3179.5236392586953 2958.843150173945 2897.1394248997813 2830.01398853995 2198.0528163456133 2460.6068691326514 2150.630970526502 2455.3818204203453 2687.9445363563295 2220.4923510364856 1.349706794375559 1.4319002890392984 1.332516704591579 1.3047283966312466 1.2744984179832688 0.9898943427207043 1.108135710525679 0.9685378873395473 1.105782606850331 1.210517358954939 1.0 11.116663886302291 -7.087720166322181 2.76603801421629 1.0451329694349996 1.3584681741509987 0.7829255954165961 0.0721817674927401 0.06921527975575133 1.0345461637802256 0.008498242822710094 0.015960262635275065 8.171086982907466e-08 7.087720166322181 0.3133352047159992 RES(ph)IYVPHALAFR ddPTM_A549_MK2206_60min_R1 2 RESIYVPHALAFR 13 1 J3QQT0 J3QQT0 MICAL3 1 RES(0.998)IY(0.002)VPHALAFR;RES(0.979)IY(0.021)VPHALAFR 89.541 4.1337e-05 3783100.0 0.0 132.12 344.56 239.72299999999998 199.81400000000002 132.24 81.46 84.20100000000001 279.43 235.20999999999998 367.42 True False 0.0 138.84434366985312 393.42378910989 298.4551457615744 170.42162529200525 146.23354902619232 96.2602275646809 96.13674960474772 216.13955115801767 182.07589763956045 276.1794737238707 0.0 0.5027323059087014 1.4245221913314323 1.0806565083832962 0.617068397568155 0.5294873911317513 0.3485422948590439 0.34809520167623687 0.7826054132253072 0.6592665819241994 1.0 8.109462289033214 -9.459719163346383 1.575954337162118 0.9408268264686349 0.638701277882599 0.029705649117261923 0.37160298208180476 0.5919619387711584 3.003595436005139 0.08918585398821441 0.07299441681328762 3.4696114044896796e-10 9.459719163346383 -0.3021255485860359 RES(ph)IYVPHALAFR ddPTM_A549_PD325901_60min_R1 2 RESIYVPHALAFR 13 1 J3QQT0 J3QQT0 MICAL3 1 RES(0.992)IY(0.008)VPHALAFR;RES(1)IYVPHALAFR 78.285 0.00018742 2889200.0 206.906 122.55 295.57 0.0 329.12 383.87 0.0 260.40999999999997 237.2 0.0 0.0 True False 227.9109448038533 132.87771858926243 315.6291576067971 0.0 306.0037466023613 380.743889991693 0.0 255.21591826230687 227.23130888521948 0.0 0.0 0.0 RES(ph)LGLESK ddPTM_A549_MK2206_60min_R1 2 RESLGLESK 9 1 Q96BH1 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 1 RES(1)LGLESK;RES(1)LGLESK 142.77 1.5463e-05 69297000.0 10067.1 11004.5 10461.7 9524.1 15182.4 11912.3 11042.0 11981.8 16369.6 17309.4 15867.599999999999 True False 11766.180363035663 11564.582045980167 11945.326371403926 11857.504927553096 12949.08907200366 13172.851679255227 13048.1884700369 13680.256842723567 12661.911736879669 13399.194518099599 11927.236996518674 0.9864967357041685 0.9695943871456266 1.001516644206075 0.9941535437766575 1.085673830056638 1.1044344707076856 1.0939824935016726 1.1469761896000361 1.0615963898910898 1.1234114423994896 1.0 13.541972253840513 -6.661917268100069 7.043386027985779 1.0527831291607235 0.9866443394571834 0.4257734653456311 0.04543020795918145 0.24139772670402276 14.93127776707457 0.007463918307486065 0.015592123977185353 2.1781246595693953e-07 6.661917268100069 -0.06613878970354004 RES(ph)LGLESK ddPTM_A549_PD325901_60min_R1 2 RESLGLESK 9 1 Q96BH1 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 1 RES(1)LGLESK;RES(1)LGLESK 135.13 1.9079e-05 121383000.0 11852.900000000001 11827.0 11048.8 10859.9 13787.7 12806.6 13814.9 12760.0 12718.8 13344.7 13112.0 True False 13056.1976823562 12823.702796860112 11798.638009831782 11530.691358377613 12819.299516982803 12702.307295614697 14340.633579303352 12505.491789973641 12184.273066818425 12502.113364579245 11499.30712381626 1.135389944957245 1.115171780245863 1.0260303410277283 1.002729228311187 1.1147888632727012 1.1046150136565098 1.2470867526968135 1.0874995906556377 1.05956584476151 1.087205796833278 1.0 13.489259315575733 -9.38991877409654 1.2381978957240962 1.0151006439096835 1.101821069852379 0.09008113365736148 0.06362495488381034 0.40545440816017125 1.2905068062909386 0.015735597010593617 0.012718555161523978 4.0745647708150785e-10 9.38991877409654 0.08672042594269547 RES(ph)LSTSSDLYK ddPTM_A549_MK2206_60min_R1 2 RESLSTSSDLYK 12 1 Q8TB72-4;Q8TB72-3;Q8TB72 Q8TB72-4 PUM2 Pumilio homolog 2 1 RES(1)LSTSSDLYK;RES(1)LSTSSDLYK 126.1 1.9158e-06 11612600.0 8663.8 10819.400000000001 8436.5 8026.2 10800.8 8758.9 7291.200000000001 8717.1 12633.900000000001 12601.900000000001 14346.0 True False 10126.03763042668 11370.06124660619 9632.92255869976 9992.619360309807 9212.016627733243 9685.76098431273 8615.916661178504 9952.775619999125 9772.341822192602 9755.122037600342 10783.492270542298 0.9390313802225635 1.0543950847599017 0.8933026812672185 0.9266589254769579 0.8542702490637547 0.89820261760392 0.7989913142252582 0.9229640426587522 0.9062316341514061 0.9046347688539458 1.0 13.39653685499353 -10.559753401296115 0.8921589697422146 0.9990696285914061 0.9100525955086093 0.0 0.06484450556461266 0.6999151393295625 1.0105830150928856 0.039123833544499394 0.011335076235305183 2.7557930384149465e-11 10.559753401296115 -0.08901703308279685 RES(ph)LSTSSDLYK ddPTM_A549_PD325901_60min_R1 3 RESLSTSSDLYK 12 1 Q8TB72-4;Q8TB72-3;Q8TB72 Q8TB72-4 PUM2 Pumilio homolog 2 1 RES(0.948)LS(0.047)T(0.005)SSDLYK;RES(0.748)LS(0.252)TSSDLYK;RES(0.997)LS(0.003)TSSDLYK 152.37 6.394e-13 57035800.0 11835.7 14684.4 12111.0 13269.599999999999 14974.5 12963.8 14033.7 15078.7 16633.6 18780.6 18490.4 True False 13037.251551018178 15921.905922906273 12932.925289359266 14089.233054551834 13922.742779220533 12858.227110934196 14567.760133035297 14777.943499488694 15934.54763690214 17594.789710882746 16216.198020302942 0.8039647477599453 0.9818519669636366 0.7975312877387803 0.8688370132698113 0.8585701014374044 0.7929248949004871 0.8983462162213501 0.9113075383629671 0.9826315402014596 1.0850132496442004 1.0 13.985147990706956 -8.542697551458488 1.6690213927380262 0.9937773479688803 0.8561719732206706 0.6077035673604181 0.05702042500590614 0.16501432754482231 0.8970410064861342 0.008556883157060085 0.009971811057209913 2.866173316832684e-09 8.542697551458488 -0.13760537474820966 RES(ph)LSTSSDLYKR ddPTM_A549_PD325901_60min_R1 2 RESLSTSSDLYKR 13 2 Q8TB72-4;Q8TB72-3;Q8TB72 Q8TB72-4 PUM2 Pumilio homolog 2 1 RES(0.999)LS(0.001)TSSDLYKR;RES(0.976)LS(0.019)T(0.005)SSDLYKR 104.26 3.7674e-05 57976000.0 10244.7 12249.599999999999 10038.1 11120.4 12851.599999999999 14512.1 13811.0 14511.3 16346.099999999999 17050.2 17790.4 True False 11284.734402250473 13281.916781974942 10719.345829998952 11807.281851739182 11948.947951613107 14393.918269071417 14336.585162669182 14221.86073760537 15659.13026209395 15973.647462194664 15602.293582637334 0.7232740713716885 0.8512797629161027 0.6870365419817339 0.7567657786467147 0.7658456039380152 0.9225514308415123 0.9188767719781489 0.9115237232448857 1.0036428413012215 1.023801236503496 1.0 13.929470504603184 -7.618531282058609 0.910924752482118 1.0003601589740394 0.7481474918733722 0.8289090112910237 0.04737711144441129 0.14305224272480682 0.2386923067577482 0.0083181782454478 0.015870851294804478 2.4069591404975338e-08 7.618531282058609 -0.25221266710066725 RES(ph)LSYIPK ddPTM_A549_MK2206_60min_R1 1 RESLSYIPK 9 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RES(0.966)LS(0.033)YIPK 53.251999999999995 0.0093047 10429000.0 1100.0 1527.9 1148.3 927.99 1344.7 1210.8 1160.9 1250.4 1849.6 1677.7 1857.5 True False 1285.6531075820471 1605.6635838114498 1311.1462068576934 1155.347591659054 1146.8964113133186 1338.9260523360072 1371.820503067002 1427.6480291893988 1430.6685532042713 1298.706404786746 1396.2314856079968 0.9208022601081813 1.1499981201987108 0.9390607649037133 0.8274756754650547 0.8214228250367067 0.9589570684641625 0.9825165219430896 1.0225009562563485 1.024664296680918 0.9301512092897812 1.0 10.447322434986704 -7.850190179504854 2.922777900508631 1.012396527608609 0.9353114510502903 0.08609843498083136 0.08447893722101524 0.39178979189903934 6.79264116601043 0.013666832509850253 0.01963927091447012 1.4119191235001928e-08 7.850190179504854 -0.07708507655831875 RES(ph)LSYIPK ddPTM_A549_PD325901_60min_R1 1 RESLSYIPK 9 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RES(0.995)LS(0.005)YIPK 78.705 0.0019445 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RES(ph)LTSFGNGPLSAGGPGKPGGGGGGSGSSSMSR ddPTM_A549_PD325901_60min_R1 1 RESLTSFGNGPLSAGGPGKPGGGGGGSGSSSMSR 34 2 Q14643;A0A3B3ITU8;A0A3B3IS59;A0A3B3IRP0;A0A3B3IU13;A0A3B3IU05;A0A3B3ITQ1;A0A3F2YNW8;A0A3B3ISE3;A0A3B3IU04;Q14643-6;Q14643-2;Q14643-3;Q14643-5;Q14643-7;Q14643-8;Q14643-4 Q14643 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 1 RES(0.767)LT(0.116)S(0.116)FGNGPLSAGGPGKPGGGGGGSGSSSMSR 46.943000000000005 0.0033823 9279200.0 1208.9 1374.6 1419.1 1421.4 1811.6 2010.2 2022.8 1896.1 1668.2 1546.4 1624.5 True False 1331.626638054857 1490.44236615912 1515.4086597415353 1509.1966497663823 1684.3594656807188 1993.829597679687 2099.7787609186325 1858.2807980383257 1598.0913553217677 1448.760040089725 1424.6967985539586 0.9346737069995763 1.0461470592703597 1.063670993912282 1.0593107609269492 1.1822581951404068 1.3994764357604985 1.4738425488496008 1.304334227412069 1.1217062865192098 1.0168900790401088 1.0 10.476439204805757 -5.6870136667699285 1.2547331603192489 1.1395163328933575 0.9329456567380547 0.18112673335547003 0.15083335082962512 1.4428637678713458 3.085344808902482 0.027085316306946997 0.31398729974449396 2.0558259003850678e-06 5.6870136667699285 -0.20657067615530278 RES(ph)PPAGQK ddPTM_A549_MK2206_60min_R1 2 RESPPAGQK 9 1 J3KPC5;P47736-3;F2Z357;P47736;A0A0A0MQY8;X6R8W7;P47736-2;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 RES(1)PPAGQK;RES(1)PPAGQK 88.338 0.00046905 67266000.0 5405.7 5603.6 4827.1 4222.1 4017.2 2764.3 2711.4 3497.7 3446.2 7192.099999999999 8228.9 True False 6318.050003323882 5888.799305089234 5511.6553645587155 5256.5146895372745 3426.2752015526603 3056.8163912061655 3204.026283069919 3993.5096862570044 2665.6412024505607 5567.39961486962 6185.43702391367 1.021439548878683 0.9520425609900162 0.8910696759582176 0.8498210666788675 0.553926131380249 0.49419570183774125 0.5179951344881136 0.6456309668690504 0.43095438400631353 0.9000818524779025 1.0 12.594659815184537 -6.538219540085505 3.8514082069023883 0.6741032947437654 0.9475478118687093 0.4021353805859871 0.1648134157634857 0.2601648367136966 8.545225233155184 0.03259598861324226 0.07397481408255994 2.8958793224631496e-07 6.538219540085505 0.2734445171249439 RES(ph)PPAGQK ddPTM_A549_PD325901_60min_R1 3 RESPPAGQK 9 1 J3KPC5;P47736-3;F2Z357;P47736;A0A0A0MQY8;X6R8W7;P47736-2;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 RES(1)PPAGQK;RES(1)PPAGQK;RES(1)PPAGQK 102.03 0.00029663 108777700.0 7629.6 7825.0 8745.7 7971.999999999999 9084.6 7282.5 7715.799999999999 7903.1 8815.099999999999 8385.0 9092.6 True False 8404.151375385343 8484.44021183989 9339.235794166409 8464.412334274373 8446.529036168607 7223.193734505181 8009.428991247765 7745.466470637991 8444.632002335999 7855.569669006946 7974.267842740371 1.053908840425561 1.0639773304785556 1.1711715706500478 1.0614657672905008 1.0592231415775901 0.9058127814305919 1.004409326247977 0.9713075386211567 1.0589852471564318 0.9851148499054386 1.0 12.96113634860075 -6.84323880394141 3.19912618614251 1.013539305306692 1.0934481900885145 0.4339897794306279 0.04905889435219012 0.22224357474537146 4.565549896793331 0.007529943701442174 0.015323866942225518 1.4347003229254965e-07 6.84323880394141 0.07990888478182256 RES(ph)PS(ph)PAPK ddPTM_A549_MK2206_60min_R1 1 RESPSPAPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RES(1)PS(1)PAPK 43.083999999999996 0.034451 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RES(ph)PS(ph)PAPK ddPTM_A549_PD325901_60min_R1 2 RESPSPAPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RES(1)PS(1)PAPK;RES(1)PS(1)PAPK 43.544 0.016526 16343800.0 3389.8 3286.0 3885.1 3611.9 3522.1 3183.3 2762.9 3518.5 3824.0 3774.0 3955.6000000000004 True False 3733.9300005611335 3562.9227522180013 4148.766249004185 3834.9988597799334 3274.7198465853703 3157.376260219751 2868.043671416893 3448.320757290149 3663.290578318208 3535.7089959251325 3469.086276614369 1.0763439427067916 1.0270493346435914 1.195924781972602 1.1054780867320124 0.9439718662117884 0.9101463637569633 0.8267432524670273 0.9940141242769879 1.0559813986215907 1.0192046879202392 1.0 11.760340005740657 -6.744158204145599 24.60595707453967 0.995446073657245 1.1026688066436539 0.4146248670105792 0.07245935676828555 215.16891449699062 306368.0611478594 0.011903523272818324 0.02472937335618713 1.8023610598629317e-07 6.744158204145599 0.10722273298640883 RES(ph)PS(ph)PAPKPR ddPTM_A549_MK2206_60min_R1 2 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR 57.678999999999995 0.01059 150275000.0 4954.6 4691.7 3242.02 3916.7 5422.5 4770.4 3682.7 4650.4 6869.9 6712.6 7277.1 True False 5790.815351660008 4930.4874901290505 3701.787185889384 4876.291675827345 4624.857433142316 5275.2005616647575 4351.798920359078 5309.608441252706 5313.878618976005 5196.218997896832 5469.995232257305 1.058650895618845 0.9013696138258578 0.6767441338996864 0.8914617780781947 0.8454956973031535 0.9643885118137184 0.7955763644355535 0.9706788060693771 0.971459460812569 0.9499494564920317 1.0 12.417323860202453 -8.409838481404229 7.214718603389934 0.9857307803168646 0.8724489123418764 0.20393265479153055 0.09093694965188732 0.2680786521241509 15.43231276577014 0.014448554052493508 0.01746531624631302 3.8918986180426415e-09 8.409838481404229 -0.11328186797498818 RES(ph)PS(ph)PAPKPR ddPTM_A549_PD325901_60min_R1 1 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RES(1)PS(1)PAPKPR 45.33 0.038377999999999995 259550000.0 4198.2 4029.9 4587.6 3898.0 5198.9 4242.3 5041.8 4445.4 4539.1 5672.5 5226.3 True False 4624.398173448506 4369.513815935282 4898.942123479864 4138.770606999687 4833.747199231337 4207.752115330081 5233.66845797882 4356.733009651162 4348.337412145444 5314.337381925095 4583.4982322453425 1.0089233024931543 0.9533141706470704 1.0688216456625517 0.9029720089958898 1.0545978102981406 0.9180219784373752 1.1418502184989334 0.9505257314164833 0.9486940305887936 1.159450077789543 1.0 12.162233401733914 RES(ph)PSEER ddPTM_A549_MK2206_60min_R1 3 RESPSEER 8 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RES(0.887)PS(0.113)EER;RES(0.999)PS(0.001)EER;RES(0.985)PS(0.015)EER 62.408 0.0043401 95265000.0 1441.38 1871.11 1388.46 1067.88 0.0 104.06 0.0 0.0 132.1 1876.43 2296.88 True False 1684.6497056423734 1966.3415068430127 1585.3645061165491 1329.510647938955 0.0 115.07156013056246 0.0 0.0 102.17956092035261 1452.5431597627664 1726.501305336901 0.9757593002883014 1.1389168955532938 0.9182527121270777 0.7700606097598754 0.0 0.06665014371831475 0.0 0.0 0.05918301978950071 0.841321784856296 1.0 10.753635709616411 -6.550742225125627 6.586655506266577 0.390060060246197 0.9965110056590021 0.4635731287135697 0.340280109428249 0.17568650984542988 25.618937253402944 0.06474295456098626 0.13747705057128148 2.813570325566816e-07 6.550742225125627 0.6064509454128051 RES(ph)PSEER ddPTM_A549_PD325901_60min_R1 3 RESPSEER 8 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RES(0.987)PS(0.013)EER;RES(0.985)PS(0.015)EER;RES(0.999)PS(0.001)EER 70.808 0.0026863000000000004 276915000.0 1828.06 1607.04 1867.48 1488.15 2113.44 1405.75 1735.5099999999998 1600.3600000000001 1545.8600000000001 1711.8899999999999 2034.45 True False 2013.6433054533554 1742.4709007073711 1994.2184228695112 1580.0696456661324 1964.9992653721886 1394.302038074927 1801.5557827575124 1568.4395643418668 1480.8928800729575 1603.800973247024 1784.225547441122 1.1285811417403235 0.9765978876417087 1.1176941310640653 0.8855773015537283 1.1013177499842026 0.7814606399255909 1.0097130294660588 0.8790590217650854 0.8299919716970793 0.8988779336486595 1.0 10.801082285350205 -6.438082516340713 0.9343867816108155 0.9157804354072201 1.079820324578042 0.3225192590895014 0.09351559384361137 0.6862892519228381 1.0266963866576455 0.015304179947150267 0.07484096245014417 3.6468464993230654e-07 6.438082516340713 0.1640398891708219 RES(ph)PSEERLEPK ddPTM_A549_MK2206_60min_R1 4 RESPSEERLEPK 12 2 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RES(0.998)PS(0.002)EERLEPK;RES(0.999)PS(0.001)EERLEPK;RES(0.929)PS(0.071)EERLEPK;RES(0.994)PS(0.006)EERLEPK 128.44 2.8511000000000003e-08 317052000.0 14863.3 16627.9 16186.3 14626.4 20260.300000000003 13121.2 13802.3 14153.900000000001 21675.9 24461.799999999996 23029.1 True False 17371.861667203848 17474.189086496754 18481.76073156901 18209.868656604045 17280.036708657128 14509.676674852355 16309.999250134973 16160.258669500823 16766.343259299567 18935.862390542068 17310.338899173683 1.0035541053464356 1.0094654523101736 1.0676718023383844 1.051964884261931 0.998249474450324 0.838208700555538 0.9422114347462913 0.933561079516025 0.9685739462963325 1.0939047756855864 1.0 14.07934634939387 -6.998906288256847 24.921944143482367 0.9657701088891917 1.0328325373272642 0.23629614135414767 0.059118873857899414 36.670318059912184 835540.5896740651 0.007304038881607371 0.013725189966231139 1.0025215380989864e-07 6.998906288256847 0.06706242843807253 RES(ph)PSEERLEPK ddPTM_A549_PD325901_60min_R1 4 RESPSEERLEPK 12 2 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RES(0.973)PS(0.027)EERLEPK;RES(0.999)PS(0.001)EERLEPK;RES(0.944)PS(0.056)EERLEPK;RES(0.996)PS(0.004)EERLEPK 145.33 1.5788e-12 387793000.0 17132.300000000003 17853.2 18040.0 18781.699999999997 20434.899999999998 19938.0 18499.800000000003 20656.8 18826.800000000003 20421.600000000002 22685.899999999998 True False 18871.55848386735 19357.751819810863 19264.302883332617 19941.802952664453 18999.623120577882 19775.631538422836 19203.820012479002 20244.783919053887 18035.575067960584 19132.17669082794 19895.678117768704 0.9485255225863993 0.9729626557700779 0.9682657092309807 1.0023183343951747 0.9549623294121068 0.9939661981544295 0.9652257087597428 1.0175468159073904 0.9065071801625664 0.9616247597884644 1.0 14.280167451763786 -8.745337417403837 24.999463590690006 0.9558506020827325 0.9776340119543816 0.10963575836903505 0.027816344466998006 524.995894576673 815093.5118862921 0.006193951355632997 0.007011958331746886 1.7974738570197793e-09 8.745337417403837 0.021783409871649062 RES(ph)PSPAPK ddPTM_A549_MK2206_60min_R1 4 RESPSPAPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(0.994)PS(0.006)PAPK;RES(0.976)PS(0.024)PAPK;RES(0.98)PS(0.02)PAPK;RES(0.99)PS(0.01)PAPK 155.24 1.1632e-05 579140000.0 26226.3 27433.800000000003 26060.1 23315.6 29924.9 26926.1 25418.1 29509.600000000002 32559.499999999996 28627.6 29356.699999999997 True False 30652.6582685264 28830.063240766103 29755.814042786882 29027.92304667706 25522.98685127532 29775.402029901357 30036.23975278437 33692.676169359795 25184.82523683741 22160.605277268325 22066.621186297856 1.3890961379968763 1.3065010269296673 1.348453566659475 1.3154675018711874 1.156633207947743 1.3493412416210881 1.3611617065976191 1.5268615836066952 1.1413086319021863 1.0042591065563236 1.0 14.429578122399903 -8.958717805225778 5.5029565944634395 1.0605068017848596 1.3373902851075565 0.7064658830460446 0.08594352019601197 0.08442014878922545 5.643021722433899 0.01652125166230581 0.017203381698544466 1.099720180734174e-09 8.958717805225778 0.27688348332269697 RES(ph)PSPAPK ddPTM_A549_PD325901_60min_R1 4 RESPSPAPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(0.997)PS(0.003)PAPK;RES(0.998)PS(0.002)PAPK;RES(0.885)PS(0.115)PAPK;RES(0.976)PS(0.024)PAPK 152.23 1.547e-05 682606000.0 40615.9 43302.399999999994 44109.3 43462.3 45508.1 37613.600000000006 39379.6 44097.2 36824.7 48491.4 40366.0 True False 44739.19626815471 46951.645217786 47102.82234876847 46146.867560954975 42311.768050422106 37307.287312349355 40878.21222734399 43217.646752415814 35277.08592034375 45429.64472840593 35401.237901156754 1.2637749107268599 1.3262712831929482 1.33054167428505 1.3035382460297271 1.1952058899341356 1.053841320931049 1.1547113787794485 1.220794788958599 0.9964930045339192 1.2832784225017593 1.0 15.111512188519725 -7.5644985171588175 0.4813501197306663 0.9881538949566563 1.3428647734103036 0.17938381302380113 0.10909140331542222 0.35049757621715627 0.16149254622198897 0.019312841352807565 0.04914034496499441 2.725847045957576e-08 7.5644985171588175 0.35471087845364735 RES(ph)PSPAPKPR ddPTM_A549_MK2206_60min_R1 10 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(1)PSPAPKPR;RES(0.999)PS(0.001)PAPKPR;RES(0.997)PS(0.003)PAPKPR;RES(1)PSPAPKPR;RES(0.999)PS(0.001)PAPKPR;RES(0.942)PS(0.058)PAPKPR;RES(0.995)PS(0.005)PAPKPR;RES(0.989)PS(0.011)PAPKPR;RES(0.999)PS(0.001)PAPKPR;RES(0.999)PS(0.001)PAPKPR 145.43 7.114e-12 2661763500.0 27846.319999999996 27200.069999999996 23485.480000000007 20764.149999999994 31181.73 24293.309999999998 23781.219999999998 25405.3 34457.50000000001 38448.6 38827.2 True False 32546.098038840086 28584.437382107648 26816.074212516105 25851.3676821381 26594.938823187964 26864.01193960592 28101.959844902278 29006.5790754682 26652.931267320597 29763.03455628759 29185.33466379479 1.1151524700251052 0.9794109853935452 0.9188201718920901 0.8857656758072894 0.9112432366992768 0.9204626998138029 0.9628794793216311 0.9938751571504731 0.9132302772729308 1.0197941842760312 1.0 14.832955991029115 -5.286212392473984 3.3563472486464403 0.9481852582831413 1.1327594509626295 0.5818203456879459 0.04079666970225599 0.16234622494176934 3.048737313515194 0.005931469437860047 0.07403673013089351 5.173537573147982e-06 5.286212392473984 0.18457419267948827 RES(ph)PSPAPKPR ddPTM_A549_PD325901_60min_R1 12 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(1)PSPAPKPR;RES(0.999)PS(0.001)PAPKPR;RES(1)PSPAPKPR;RES(0.978)PS(0.022)PAPKPR;RES(0.995)PS(0.005)PAPKPR;RES(0.925)PS(0.075)PAPKPR;RES(0.996)PS(0.004)PAPKPR;RES(1)PSPAPKPR;RES(0.985)PS(0.015)PAPKPR;RES(0.974)PS(0.026)PAPKPR;RES(0.993)PS(0.007)PAPKPR;RES(0.895)PS(0.105)PAPKPR 146.59 3.8612e-12 4308539800.0 33748.69 32370.48 35325.82 32397.239999999998 39099.59999999999 33340.29 34137.00000000001 33556.07 38537.439999999995 36439.840000000004 38323.17 True False 37174.832164327556 35098.453953809425 37723.24257661247 34398.34393532957 36353.3789822973 33068.777732177914 35436.10221548318 32886.76785962233 36917.84541435758 34139.022283538005 33609.66304059043 1.1060757175527607 1.0442965141132472 1.122392763386353 1.0234658971078243 1.081634735177002 0.9839068512005227 1.0543426803382991 0.9784914481262409 1.0984295013541747 1.0157502097628373 1.0 15.036588458282658 RES(ph)QEEPR ddPTM_A549_MK2206_60min_R1 1 RESQEEPR 8 1 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;H0YD62;H0YF37 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 RES(1)QEEPR 70.675 0.0027125 12152000.0 794.77 1075.2 654.61 842.83 123.94 66.334 0.0 93.348 145.61 1143.7 1094.6 True False 928.9077457390763 1129.9230874494863 747.4435412967995 1049.3233878360766 105.70859018232518 73.35341985105447 0.0 106.5803648662604 112.62956749138945 885.3373756658526 822.7806105768577 1.1289859457040583 1.373298146461289 0.9084360176800486 1.275338011551327 0.12847724997823184 0.08915307301617843 0.0 0.12953679692516828 0.13688894225694503 1.0760309179443788 1.0 9.684363985880871 -6.751655702226246 24.998574625629157 0.437003692336438 1.1671364614850601 0.5290222840518739 0.3617732107889479 163.0989890084648 416736.16982562956 0.06140011016548214 0.12657898503158577 1.7715128127044667e-07 6.751655702226246 0.7301327691486221 RES(ph)QEEPR ddPTM_A549_PD325901_60min_R1 2 RESQEEPR 8 1 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;H0YD62;H0YF37 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 RES(1)QEEPR;RES(1)QEEPR 125.23 0.00046067 50165000.0 783.12 1028.92 1106.3000000000002 978.21 1005.9000000000001 1002.77 1122.69 1221.33 1099.73 925.77 1027.87 True False 862.6217658975261 1115.6306993950539 1181.3801707223317 1038.6318100239007 935.2490541666119 994.6037735873335 1165.4145823095407 1196.9696150351501 1053.5121725140916 867.3167242071034 901.4485062047754 0.9569284989214577 1.2375978125384173 1.3105353911962292 1.1521809652740855 1.037495816709644 1.1033395326980515 1.2928243535685688 1.3278291625048668 1.1686881338896722 0.9621367368599105 1.0 9.816101272153572 -10.35402169374331 0.9511229499546523 1.0096748794576698 1.1803215797354336 0.303730445812314 0.1110440039455466 0.5475411243263598 0.9574619358839308 0.05501933391278217 0.020980684317897427 4.425662648776301e-11 10.35402169374331 0.17064670027776385 RES(ph)QSEREEFESEFK ddPTM_A549_MK2206_60min_R1 4 RESQSEREEFESEFK 15 2 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 RES(0.99)QS(0.01)EREEFESEFK;RES(0.998)QS(0.002)EREEFESEFK;RES(0.977)QS(0.023)EREEFESEFK;RES(0.998)QS(0.002)EREEFESEFK 120.24 1.2387e-07 20340000.0 4975.360000000001 5607.88 4775.900000000001 4105.4400000000005 6085.15 4579.85 4839.32 5400.42 5572.379999999999 6255.759999999999 6136.07 True False 5815.07913212674 5893.297138807876 5453.194434670088 5111.272984300206 5190.032495949464 5064.4866871416125 5718.561802827294 6165.946073092619 4310.244827262333 4842.579471185989 4612.314472083262 1.260772474930622 1.2777309904773313 1.1823119320411435 1.1081796384953728 1.1252555582154964 1.0980358598259488 1.239846466983065 1.336844248243035 0.9345080118345677 1.0499239591091285 1.0 12.171275165355208 -8.778729505374118 24.99098129929812 0.9690732027576906 1.1972764053251999 0.5930981505251807 0.07608731704986701 107.05312090868054 154732.9084294069 0.013621348475995065 0.014517721410890293 1.6644490078449196e-09 8.778729505374118 0.22820320256750926 RES(ph)RQES(ph)DPEDDDVK ddPTM_A549_MK2206_60min_R1 2 RESRQESDPEDDDVK 15 2 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 2 RES(1)RQES(1)DPEDDDVK;RES(1)RQES(1)DPEDDDVK 53.059 0.015281 22593000.0 1387.08 1705.58 1563.8899999999999 1396.53 3465.9 2676.8 2672.5 3368.3 3708.2000000000003 3000.4 2542.2 True False 1621.1851931499145 1792.3867368788074 1785.6731180376894 1738.6799126926142 2956.0707012499665 2960.057199283965 3158.0586565996773 3845.7668399861277 2868.2986207785884 2322.607556131701 1910.90157884934 0.8483875941565343 0.9379796200483036 0.9344662947596403 0.9098741305868667 1.5469507869840062 1.5490369739850127 1.6526537481335484 2.012540511009404 1.5010184996056941 1.215451168097455 1.0 10.90003775875843 -6.74786984879429 24.58001603766462 1.375309804723513 0.911754717411737 0.5165558183259372 0.25762232710367483 189.13443636250594 342597.68434323004 0.0479510726641437 0.09936625463481377 1.787023037229171e-07 6.74786984879429 -0.4635550873117761 RES(ph)RQES(ph)DPEDDDVK ddPTM_A549_PD325901_60min_R1 1 RESRQESDPEDDDVK 15 2 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 2 RES(1)RQES(1)DPEDDDVK 61.766999999999996 0.0042198999999999995 14836000.0 1321.7 1566.0 1515.9 1485.2 1379.0 893.04 1346.9 1346.5 1653.9 1285.6 1717.0 True False 1455.8780110158862 1697.9723158774784 1618.7780898472229 1576.9374308660695 1282.1437972917374 885.7673783264685 1398.157016551961 1319.6430011911852 1584.3923345921783 1204.4269965981307 1505.8198849597718 0.9668340985248579 1.1276065171119984 1.0750144197295342 1.0472284544895605 0.8514589361568897 0.5882293009765454 0.9285021605285236 0.8763617842823478 1.0521791818644404 0.7998479822374687 1.0 10.55633350047841 -6.552856605155008 24.218441057565915 0.9623085412298636 1.0631846550863262 0.1136406934098062 0.13824122200371003 278.79116822908975 225228.07953765165 0.021336523323069352 0.0444159803056611 2.799905636605194e-07 6.552856605155008 0.10087611385646256 RES(ph)SSSAER ddPTM_A549_MK2206_60min_R1 3 RESSSSAER 9 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 RES(0.99)S(0.004)S(0.004)S(0.001)AER;RES(0.97)S(0.024)S(0.003)S(0.003)AER;RES(0.984)S(0.012)S(0.003)S(0.001)AER 90.697 0.00044101 104062000.0 2989.83 2485.44 1533.35 977.26 366.625 216.45 245.587 145.39 260.81 3071.05 2929.34 True False 3494.4402096745757 2611.938279827428 1750.8020868111498 1216.6887438708688 312.69494816520074 239.3545953321184 290.20697897038133 165.99947773820116 201.73695142798758 2377.297672063143 2201.904032328898 1.5870084065283239 1.186218037425022 0.7951309689729623 0.5525621126112421 0.14201116105612976 0.10870346382851169 0.13179819588387634 0.07538906114933071 0.09161932058165836 1.0796554423621885 1.0 11.104535876588763 -5.722891864707648 1.5148054504574784 0.42983227263815027 1.6265918900446636 0.5659893679674911 0.3411763675466952 0.3742226615238749 1.3499313634387804 0.05928942245540492 0.5161259710824414 1.8928148532943915e-06 5.722891864707648 1.1967596174065134 RES(ph)SSSAER ddPTM_A549_PD325901_60min_R1 3 RESSSSAER 9 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 RES(0.995)S(0.004)S(0.001)SAER;RES(0.829)S(0.145)S(0.025)S(0.001)AER;RES(0.995)S(0.005)SSAER 138.51 3.4409e-05 188099000.0 4170.78 4546.290000000001 3791.06 3605.67 4303.34 2817.6800000000003 2462.18 3054.86 3878.54 6059.699999999999 8155.2 True False 4594.194515234043 4929.421813506142 4048.3441290957253 3828.3840468292897 4001.0882441170556 2794.733748278827 2555.879607256593 2993.928420808693 3715.538451786167 5677.089507845125 7152.162100072176 0.642350446054303 0.6892212095495426 0.5660308131236107 0.5352764651112502 0.5594235964082356 0.3907536922646963 0.35735761738828603 0.4186046651233589 0.5194986354893538 0.7937585066462398 1.0 12.804163719494289 -10.508307513064846 0.8374726748504228 0.9984740920869644 0.5179340901354185 0.6110712207223964 0.1120106153238188 0.25449853857508997 0.32234755892665523 0.07380081053539016 0.021363973904134755 3.102362105184228e-11 10.508307513064846 -0.4805400019515459 RES(ph)SVGYR ddPTM_A549_MK2206_60min_R1 2 RESSVGYR 8 1 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 RES(0.997)S(0.003)VGYR;RES(0.993)S(0.007)VGYR 118.04 0.00052338 22644000.0 1377.96 1488.1799999999998 1350.84 1439.39 2086.15 1650.97 1230.43 1320.4 2058.3900000000003 2185.51 1579.8500000000001 True False 1610.5259601125076 1563.9220054692853 1542.4094244288476 1792.0406146166733 1779.2800985061951 1825.67454957481 1453.9832040561057 1507.5707435554086 1592.16795157339 1691.8017730973843 1187.5296433581661 1.3561985329125492 1.3169540770761181 1.2988386715696052 1.5090491632268106 1.4983037336858744 1.5373717698634117 1.2243763447828102 1.2695015673816878 1.3407395432007607 1.4246396143116122 1.0 10.213747811404238 -10.651912270104708 0.4228983998151761 0.9007828245973575 1.4005638280966617 0.0 0.15665699791763799 0.9207074028272488 0.21884500153061104 0.1999479851015713 0.02975788771974222 2.2288853510063814e-11 10.651912270104708 0.4997810034993042 RES(ph)SVGYR ddPTM_A549_PD325901_60min_R1 3 RESSVGYR 8 1 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 RES(0.528)S(0.472)VGYR;RES(0.946)S(0.054)VGYR;RES(0.976)S(0.024)VGYR 90.913 0.0010972000000000002 30563700.0 2748.34 2935.1099999999997 2988.4399999999996 2579.4300000000003 3656.77 2948.85 3358.33 3203.29 3628.1400000000003 3044.6400000000003 3611.79 True False 3027.3494535790287 3182.4620204694393 3191.2535093495844 2738.7555327894343 3399.9310903716487 2924.8355432881 3486.133085898688 3139.397868017609 3475.661892996713 2852.400910798488 3167.5627270232108 0.9557346497835733 1.0047037090439028 1.0074791833242203 0.8646255082573352 1.0733587251062306 0.9233709938356235 1.1005727072609106 0.9911083500366636 1.0972669501838233 0.9005033701350239 1.0 11.62915747390008 -7.759661451821673 24.999998794758927 1.0458399219913905 0.9744538873960898 0.031385707731946266 0.07303176377058265 51.13406768378827 719006.1478331044 0.009067859333898993 0.013068574892118273 1.739156035184004e-08 7.759661451821673 -0.07138603459530068 RES(ph)TPTYENSLLR ddPTM_A549_MK2206_60min_R1 1 RESTPTYENSLLR 13 1 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5 A0A2R8Y700 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 RES(0.988)T(0.012)PTYENSLLR 99.74700000000001 6.5356e-05 6755200.0 561.54 346.63 465.52 402.42 571.14 488.69 387.97 560.24 509.8 424.75 522.96 True False 656.3142236651114 364.2719864235636 531.5377359717791 501.0129180653201 487.12606258458317 540.4028514338322 458.4591270349775 639.655735663043 394.33111398331397 328.7986799983133 393.0945990382545 1.6696088556567559 0.9266776682121598 1.3521878379205403 1.2745352372968202 1.2392082307322108 1.374739955104909 1.1662819284636419 1.6272310462367712 1.0031455912853668 0.8364365239378825 1.0 8.618732731623084 -8.912346752809794 24.99985406340105 1.0013766085588662 1.3079849481915673 0.4117771781749795 0.199460936945619 15.638684466927781 4457.199682819387 0.029735035657388144 0.031655293081391 1.22363882181964e-09 8.912346752809794 0.30660833963270107 RES(ph)TPTYENSLLR ddPTM_A549_PD325901_60min_R1 2 RESTPTYENSLLR 13 1 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5 A0A2R8Y700 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 RES(0.98)T(0.02)PTYENSLLR;RES(0.946)T(0.054)PTYENSLLR 96.666 6.9315e-05 9960500.0 1346.81 1444.31 1214.0 1155.6100000000001 1234.87 1199.15 1282.6 1326.1799999999998 1311.63 1277.5900000000001 1943.69 True False 1483.5371597308801 1566.027072506385 1296.389340375043 1226.989405119269 1148.13699127023 1189.3845199769157 1331.4100448656507 1299.728299531916 1256.5067524161916 1196.9227493651263 1704.6284520660795 0.8702994238614123 0.9186911497389921 0.760511382291998 0.7197987359838488 0.6735409055730831 0.6977382775321701 0.7810558619105102 0.7624701429549602 0.7371147365827749 0.7021604901140814 1.0 10.735241602342512 -10.718737108228378 0.8593312999442864 1.007695085609427 0.7656217880506412 0.0 0.11043768956520421 0.38227165974025024 0.4760542308673045 0.060749026964403555 0.01390875203829991 1.9110097013070843e-11 10.718737108228378 -0.24207329755878593 RES(ph)VASGDDR ddPTM_A549_MK2206_60min_R1 1 RESVASGDDR 10 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RES(1)VASGDDR 59.227 0.0040226 1918400.0 450.31 236.63 251.43 157.68 428.87 307.02 119.45 286.7 251.88 406.26 383.68 True False 526.3113189775195 248.6734562715512 287.08655472457525 196.31160707852422 365.78379112065375 339.5086526166182 141.15251881415577 327.34060298192617 194.829582169708 314.48558384017593 288.40166697070026 1.8249246771205012 0.8622469449762744 0.9954399977644421 0.6806881844357308 1.2683137201069472 1.1772076638208546 0.4894303153542311 1.135016334753647 0.6755494315138665 1.0904430170028303 1.0 8.171935693200243 RES(ph)VASGDDRAEEDMDEAIEK ddPTM_A549_MK2206_60min_R1 3 RESVASGDDRAEEDMDEAIEK 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RES(0.5)VAS(0.5)GDDRAEEDMDEAIEK;RES(0.5)VAS(0.5)GDDRAEEDMDEAIEK;RES(0.5)VAS(0.5)GDDRAEEDMDEAIEK 68.689 0.00036162 11475100.0 670.6 318.41 466.88 300.11 1144.96 1072.4 705.0070000000001 845.3489999999999 1273.13 1083.93 902.891 True False 783.7808854041099 334.61570896092906 533.0906044219454 373.63696347244985 976.5379007193402 1185.8806561984927 833.0976461415786 965.1798095227363 984.768087770844 839.0694601779205 678.6782461760914 1.1548637219775397 0.4930402747491466 0.7854835592942057 0.5505362306478071 1.4388819830626565 1.7473385405826038 1.227529614858793 1.4221463778467838 1.4510087708267783 1.2363287977852964 1.0 9.40658396061727 -6.7633221791545 24.99999883555145 1.2889012032442584 0.7307353424687769 0.5914374619185214 0.24093373570188728 32.63216872795982 433302.87168807065 0.039352438863501295 0.07715058786739942 1.7245580626961297e-07 6.7633221791545 -0.5581658607754815 RES(ph)VASGDDRAEEDMDEAIEK ddPTM_A549_PD325901_60min_R1 4 RESVASGDDRAEEDMDEAIEK 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RES(0.5)VAS(0.5)GDDRAEEDMDEAIEK;RES(0.5)VAS(0.5)GDDRAEEDMDEAIEK;RES(0.5)VAS(0.5)GDDRAEEDMDEAIEK;RES(0.5)VAS(0.5)GDDRAEEDMDEAIEK 145.63 2.3281000000000004e-22 17452200.0 1497.27 1682.17 1622.98 1318.3 1894.6100000000001 1603.35 1212.47 1363.43 1407.22 1252.3200000000002 951.77 True False 1649.2717481680838 1823.932369476128 1733.1251825715715 1399.7283969234718 1761.5391296496718 1590.2928491889984 1258.6112093390414 1336.2353190598571 1348.0794371393702 1173.2483014777322 834.7083237671296 1.9758659416797724 2.1851134312936074 2.076324307813044 1.6769071986803066 2.1103648777571236 1.905207847948411 1.5078455234024646 1.6008410135761932 1.6150305427114238 1.4055787729332023 1.0 9.705128347400665 -10.923730498817772 0.13533612994150743 6.341762675225789e-11 2.433838343682252 0.7031270935585914 0.18608384162463687 4.5488574515861835 0.14515302042163228 2.253064028476493 0.6150482409744216 1.1919814619564793e-11 10.923730498817772 2.4338383436188344 RES(ph)VNLGK ddPTM_A549_MK2206_60min_R1 2 RESVNLGK 8 1 P46013 P46013 MKI67 Antigen KI-67 1 RES(1)VNLGK;RES(1)VNLGK 92.943 0.0020675999999999997 28712400.0 8917.7 10255.8 11122.3 12537.3 13640.5 9963.3 11036.400000000001 10130.8 15791.900000000001 14432.099999999999 15396.7 True False 10422.789743167654 10777.77641393642 12699.609384771686 15608.939062820786 11634.000519461091 11017.609792896725 13041.571022524486 11566.871924273803 12215.059864482342 11171.878586471243 11573.274462697515 0.9005912524378425 0.9312642198778652 1.0973220609002685 1.3487055122671507 1.005247093807315 0.9519872555004391 1.126869587735046 0.9994467824603703 1.055454089838913 0.9653170001696552 1.0 13.498509487965205 -10.847485479315724 0.5958397370879097 0.9904735586034997 1.0519591127354984 0.03712708203249071 0.11651857240478634 5.441625145513642 2.5527244346951505 0.18609518989662135 0.025565811472011632 1.4207397146563448e-11 10.847485479315724 0.06148555413199863 RES(ph)VNLGK ddPTM_A549_PD325901_60min_R1 4 RESVNLGK 8 1 P46013 P46013 MKI67 Antigen KI-67 1 RES(1)VNLGK;RES(1)VNLGK;RES(1)VNLGK;RES(1)VNLGK 79.23 0.0033222 47536300.0 24189.199999999997 24315.399999999998 24477.3 25943.0 31211.9 28506.299999999996 26982.5 28720.4 28279.799999999996 27433.0 29609.6 True False 26644.86977685212 26364.544092903718 26138.476771962163 27545.440189172135 29019.683819209535 28274.15414403363 28009.33380289053 28147.549091282057 27091.298351653593 25700.875698254946 25967.806910719184 1.0260731631462283 1.0152780395952792 1.0065723633046781 1.0607534276528268 1.1175254005462654 1.0888156339595398 1.078617609072279 1.0839401720775697 1.0432647795324852 0.9897206871037673 1.0 14.66443655711484 -4.249444189408388 16.11566960552273 1.0391617074352466 1.0528485356498838 0.0 0.04093582141285883 0.0 0.0 0.005965536877860188 0.0 5.630614710068908e-05 4.249444189408388 0.013686828214637181 RES(ph)WISDIR ddPTM_A549_PD325901_60min_R1 1 RESWISDIR 9 1 I3L359;I3L2Y6;I3L1M1;I3NI06;I3L1G9;I3L167;A0A0A6YYL4;P57737-2;P57737-4;P57737;P57737-3 I3L359 CORO7;CORO7-PAM16 Coronin;Coronin-7 1 RES(1)WISDIR 84.479 0.00056462 2877300.0 297.95 189.01 256.2 239.65 311.99 185.28 198.57 73.452 399.24 458.36 298.35 True False 328.197664660803 204.93853603065273 273.5872726557548 254.4526362153605 290.07689870706974 183.77114110938828 206.1266900116733 71.9869422380207 382.4613311944986 429.41907137579307 261.6548413964752 1.2543152762210812 0.7832399925676036 1.0456037090527168 0.9724744050495077 1.1086242362606535 0.7023418337248618 0.7877809136324663 0.2751217667283356 1.4617017180086116 1.6411661602894303 1.0 8.031521143143813 RESEDDPES(ph)EPDDHEK ddPTM_A549_MK2206_60min_R1 2 RESEDDPESEPDDHEK 16 1 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 RESEDDPES(1)EPDDHEK;RESEDDPES(1)EPDDHEK 99.86 6.9713e-07 15108000.0 1859.2599999999998 2324.5 1850.76 1476.01 2723.8999999999996 1643.1999999999998 1815.36 2001.96 2904.0 2984.2 3020.1 True False 2173.057633457269 2442.8071212577474 2113.2255976695506 1837.6325162606074 2323.217918328511 1817.0823333321182 2145.1874135995463 2285.743960745368 2246.24863673508 2310.067147383089 2270.1258194803286 0.9572410545749925 1.076066841888503 0.9308847904092403 0.809484875460019 1.0233872935114832 0.8004324331891349 0.9449641051572274 1.0068798571123316 0.9894820002748946 1.0175943234335372 1.0 11.148556544341258 -8.192877773370368 5.931518924316394 0.9957518981811266 0.9329707670917599 0.1590147222714482 0.07555649779793092 0.3535244228176573 23.567143873903017 0.011803130317447237 0.01525390360192907 6.413900622193522e-09 8.192877773370368 -0.06278113108936678 RESEDDPES(ph)EPDDHEK ddPTM_A549_PD325901_60min_R1 1 RESEDDPESEPDDHEK 16 1 P16383-3;P16383-4;P16383 P16383-3 GCFC2 GC-rich sequence DNA-binding factor 2 1 RESEDDPES(1)EPDDHEK 107.41 3.0217e-07 10371000.0 1195.0 1312.7 1886.4 1673.3 1663.4 1781.3 1508.4 1519.8 1698.3 1509.7 1832.6 True False 1316.3155202874964 1423.3258359210506 2014.422447844714 1776.655940659973 1546.5685224184733 1766.7936833881324 1565.8029874281522 1489.4863967399654 1626.9263569973361 1414.377284352986 1607.2018178085484 0.8190107214303172 0.8855924751639366 1.2533724299736166 1.105434252857229 0.9622740002417681 1.0992979623412762 0.9742416727496959 0.9267575361325248 1.012272596366076 0.8800246917848298 1.0 10.650335385591758 -5.540392886758054 24.999653765155937 1.0224517915240945 0.8356559536128612 0.3281960643736459 0.09647843763008869 148.73334159230473 212301.7382074609 0.011655651678756066 0.045160755809494614 2.88142362884382e-06 5.540392886758054 -0.18679583791123333 RESRQES(ph)DPEDDDVK ddPTM_A549_PD325901_60min_R1 1 RESRQESDPEDDDVK 15 2 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 RES(0.175)RQES(0.825)DPEDDDVK 61.102 0.001756 3256800.0 645.21 629.9 704.84 669.93 1115.0 950.29 613.68 902.89 886.26 865.62 980.98 True False 710.7112442215024 682.9838836342418 752.6746809472373 711.310054578579 1036.6862465411791 942.5511533076451 637.0339282185812 884.8811506464971 849.0135742521693 810.9646054723668 860.3256789445754 0.8260955840506632 0.7938666720631984 0.8748718065356349 0.8267916115803903 1.2049927973938406 1.0955748228553885 0.7404567175073484 1.0285420652932802 0.986851369232308 0.9426251305984921 1.0 9.748739089652751 -6.628824270689563 21.98726213175888 0.9975684422584249 0.8308679704174209 0.3666472908360505 0.10710539380686344 3.5001753405348315 712.0740730854401 0.014647530906804589 0.030491270605000495 2.3505837491238135e-07 6.628824270689563 -0.166700471841004 RESS(ph)VGYR ddPTM_A549_MK2206_60min_R1 1 RESSVGYR 8 1 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 RES(0.138)S(0.862)VGYR 60.518 0.004712 2330400.0 169.64 355.11 173.23 171.06 290.52 175.67 172.8 114.28 313.24 395.93 406.36 True False 198.2710847001986 373.18358220255476 197.79661883998807 212.9697076791753 247.7848928495169 194.25928279969148 204.19552324057034 130.47953996782195 242.29164014149333 306.48913801467256 305.4495970345439 0.6491122811262892 1.2217517581480086 0.6475589451100794 0.6972335525952261 0.811213683878242 0.6359781930821219 0.6685080786584815 0.4271720808754767 0.7932295294994025 1.003403314295455 1.0 8.254790526913627 -9.97884947080352 1.1038657308623316 0.9702470827815266 0.7332009983752172 0.23951008455742961 0.18475448886454762 0.4967956594981139 1.2217713339784364 0.0617015347160929 0.0349345658776537 1.0499062697044438e-10 9.97884947080352 -0.23704608440630937 RESS(ph)VGYR ddPTM_A549_PD325901_60min_R1 1 RESSVGYR 8 1 E9PNR2;Q13671-2;Q13671 E9PNR2 RIN1 Ras and Rab interactor 1 1 RES(0.128)S(0.872)VGYR 53.683 0.010259 3985600.0 267.38 301.32 265.92 289.4 378.37 233.43 300.26 222.94 349.86 366.51 318.12 True False 294.52422076524755 326.71329388263206 283.96693030686293 307.27558072491263 351.7945965056377 231.52902347346983 311.68655860857655 218.4932868069533 335.1566008709228 343.36849605101224 278.9932567288307 1.0556678832259816 1.1710436937197488 1.0178272178917442 1.1013727870260717 1.2609430085529512 0.8298731882918087 1.1171831257252296 0.7831489885051927 1.201307174232818 1.2307412016941737 1.0 8.124086442289965 RESSS(ph)SAER ddPTM_A549_PD325901_60min_R1 1 RESSSSAER 9 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 RES(0.14)S(0.263)S(0.298)S(0.298)AER 46.063 0.016964 6244600.0 530.94 521.56 481.83 315.49 533.17 287.96 210.99 319.54 414.83 357.81 592.64 True False 584.8406379426303 565.5136916149788 514.5298812791655 334.9771007702237 495.72197853664625 285.6149492328338 219.01933990815814 313.1665240257194 397.3961377101838 335.2178155357633 519.7490370544899 1.1252365973721203 1.088051446559373 0.9899583156422909 0.6444977804453441 0.9537718075361731 0.5495247299571048 0.4213944120981534 0.6025341110788578 0.7645923501124663 0.6449609169754352 1.0 9.021671369961787 -2.20030882855826 9.620140701888577 0.8402612285723182 1.1792633788256777 0.0 0.23395879977730036 0.0 0.0 0.03216600163244499 0.0 0.0063050882765687205 2.20030882855826 0.33900215025335945 RESVAS(ph)GDDRAEEDMDEAIEK ddPTM_A549_PD325901_60min_R1 2 RESVASGDDRAEEDMDEAIEK 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RES(0.167)VAS(0.833)GDDRAEEDMDEAIEK;RES(0.137)VAS(0.863)GDDRAEEDMDEAIEK 112.8 2.9039000000000002e-11 9036700.0 1587.47 1476.39 1710.79 1389.5700000000002 1466.3200000000002 1184.94 1466.52 1128.78 1207.77 1162.7 998.14 True False 1748.6287857663522 1600.810566691155 1826.8944972159984 1475.4005829575567 1363.330741729383 1175.2902415056055 1522.3292211105365 1106.26559738922 1157.0116270333112 1089.2869235723772 875.375107730778 1.9975765478404985 1.8287138308523674 2.0869847464041213 1.6854495517724006 1.5574246168177264 1.3426132764413339 1.7390592988837072 1.2637617720898826 1.3217323828554086 1.2443658883517028 1.0 9.773757549689591 -4.6201922041040735 0.13268695523973711 0.7640217489179929 3.448859508970612 0.7761624483398963 0.1558366431203158 8.893997096414608 0.15231684567582407 0.458506618706218 4.247724722015869 2.3977715112875363e-05 4.6201922041040735 2.684837760052619 up RET(ph)DDEGEDD ddPTM_A549_MK2206_60min_R1 1 RETDDEGEDD 10 1 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 RET(1)DDEGEDD 63.408 0.020173 19485000.0 148.49 150.05 172.22 0.0 0.0 0.0 0.0 0.0 0.0 132.9 118.15 True False 173.55148176805287 157.68690408463115 196.6433856527319 0.0 0.0 0.0 0.0 0.0 0.0 102.87779769694139 88.81009422588686 1.9541864388368717 1.775551590831076 2.2142008446987234 0.0 0.0 0.0 0.0 0.0 0.0 1.1584020779808384 1.0 6.47265175864723 -6.25959850314304 24.997164150981938 0.33928570566162697 1.9607368940147083 0.7700337942827084 0.4152507221639651 68.56216635691817 930992.0482530369 0.06717499615849189 0.16832553447560084 5.500491486860523e-07 6.25959850314304 1.6214511883530813 RET(ph)DDEGEDD ddPTM_A549_PD325901_60min_R1 3 RETDDEGEDD 10 1 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 RET(1)DDEGEDD;RET(1)DDEGEDD;RET(1)DDEGEDD 113.77 0.00030992 176950600.0 2973.4 3307.88 2324.3 2388.62 3264.04 3099.3 2746.6299999999997 2751.73 2726.1 2982.65 2999.8 True False 3275.25737909861 3586.6466566058707 2482.0409751513293 2536.1596324503853 3034.785090726701 3074.06032836964 2851.1545076636075 2696.8445864595765 2611.531497268116 2794.3249699777652 2630.8436172989645 1.2449456735331355 1.3633066720583757 0.943439191455854 0.9640100292446157 1.1535406630677865 1.168469424847729 1.0837415378534858 1.0250873783324201 0.9926593432221273 1.0621402775915065 1.0 11.361309778983994 -2.0000000000000004 0.37084121114069146 1.0046437311068712 5.0201374697244034 0.3251031419462833 0.10178112268916666 39.23077622569178 0.47318361155524036 0.024662352490196805 113.90830314439731 0.00999999999999999 2.0000000000000004 4.015493738617533 RET(ph)FVLK ddPTM_A549_MK2206_60min_R1 1 RETFVLK 7 1 Q5T2Z1;Q6PGN9-2;Q5T2Z0;Q6PGN9-3;Q6PGN9 Q5T2Z1 PSRC1 Proline/serine-rich coiled-coil protein 1 1 RET(1)FVLK 73.233 0.011834 2886900.0 769.66 941.94 845.89 654.8 1351.0 1208.3 881.8 1166.0 1672.9 1717.4 1535.9 True False 899.5597916196348 989.8807226489668 965.8499215526037 815.226029395089 1152.2696896588789 1336.1615039953729 1042.011645795919 1331.2840707252396 1293.9908210723538 1329.4381472138994 1154.493641316459 0.7791812439901139 0.8574154826181758 0.8366004688005502 0.706132974855967 0.9980736562091029 1.1573571790934767 0.902570277137016 1.1531324409956802 1.1208297514716734 1.1515335378529696 1.0 10.173044511765909 -6.902394185635143 5.7082687638635 1.0604305083418901 0.8036362745171255 0.7267072675660708 0.08145929357460915 0.08703798885462055 4.255197305085466 0.011347780076926347 0.021684784386120932 1.2520042824334566e-07 6.902394185635143 -0.25679423382476463 RET(ph)FVLK ddPTM_A549_PD325901_60min_R1 2 RETFVLK 7 1 Q5T2Z1;Q6PGN9-2;Q5T2Z0;Q6PGN9-3;Q6PGN9 Q5T2Z1 PSRC1 Proline/serine-rich coiled-coil protein 1 1 RET(1)FVLK;RET(1)FVLK 93.667 0.0074841000000000005 18955400.0 3996.2 3732.7 4905.0 4703.5 4705.4 4320.3 4565.1 4065.3 5216.3 5065.5 5014.8 True False 4401.891282153046 4047.267728911789 5237.8827961611105 4994.024512576459 4374.90893674876 4285.116909190901 4738.827378618571 3984.214402333846 4997.077051171883 4745.663465516362 4398.01139143638 1.0008821920571238 0.92024948748256 1.190966173111805 1.135518776122456 0.994747068019741 0.9743305616567293 1.0774932024609607 0.9059127063862858 1.1362128485846985 1.0790475610765617 1.0 12.102635625632479 RET(ph)KEVQTNELK ddPTM_A549_MK2206_60min_R1 1 RETKEVQTNELK 12 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3 O43491 EPB41L2 Band 4.1-like protein 2 1 RET(1)KEVQTNELK 56.951 0.0052745 3297200.0 1126.5 1072.1 1015.6 1072.5 1207.5 913.28 777.23 774.79 1248.7 1181.2 1577.9 True False 1316.6256597192514 1126.6653106906563 1159.6273514627487 1335.2625481463551 1029.8783495655775 1009.9226834138007 918.4426303719234 884.6188551948612 965.8714437641512 914.3660996209715 1186.0638821754283 1.1100798865102883 0.9499195849587582 0.977710702509387 1.125793111326578 0.8683160873903505 0.8514909682279871 0.7743618570420969 0.7458441897516773 0.8143502709083347 0.7709248324330388 1.0 10.211966001135954 -6.7836421939874345 24.909161398560205 0.8798084649514976 1.0298671594110507 0.5254829210008636 0.08807723830360129 203.36267020712106 228150.50126024053 0.015090943415857073 0.02853502044958278 1.6457270444352838e-07 6.7836421939874345 0.1500586944595531 RET(ph)PS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RETPSPR 7 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RET(1)PS(1)PR 51.927 0.020346 5820700.0 266.83 239.27 376.56 577.13 406.47 353.94 230.97 298.8 401.05 463.24 467.38 True False 293.91838517013593 259.43412261813785 402.11562603923096 612.778009342671 377.92094944537496 351.0576299884331 239.75968974163368 292.84019959593445 384.1952631889432 433.99094734296716 409.8952229659276 0.7170573568615798 0.6329278998201529 0.9810205230731774 1.4949625538661326 0.921994032306128 0.8564569927120489 0.5849292119258576 0.7144269637420895 0.9373011483495121 1.058785082203904 1.0 8.679111366272116 -8.982492910181904 16.09094545660116 0.972347228256087 0.8698555089706225 0.06105882549641828 0.23336931662594843 7.400587909031867 6802.771549159112 0.044338331167593975 0.04525947001928658 1.0411351039209152e-09 8.982492910181904 -0.10249171928546452 RET(ph)PSPR ddPTM_A549_MK2206_60min_R1 2 RETPSPR 7 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RET(1)PSPR;RET(1)PSPR 76.827 0.010808 11030900.0 759.01 626.48 605.05 475.75 643.9 450.37 470.07000000000005 586.23 844.15 643.42 863.06 True False 887.1123319871366 658.3651560875691 690.8551880686647 592.308771357229 549.183162969172 498.0278544685894 555.4756343153641 669.3298977540798 652.9513728305504 498.0709751254028 648.7383827557668 1.3674423397283577 1.0148392226939138 1.0649210936679752 0.9130163824146936 0.8465402657945171 0.7676867404592645 0.8562398172831502 1.031740861255723 1.0064941279670971 0.767753208943263 1.0 9.341492988500413 -4.785848952328853 1.4206478486696266 0.9645434322320255 2.183579806488688 0.57455808785702 0.10557534306237758 2.2655399342205014 1.60784987438905 0.014340800423816665 5.487021804627259 1.6373859054138616e-05 4.785848952328853 1.2190363742566626 RET(ph)PSPR ddPTM_A549_PD325901_60min_R1 3 RETPSPR 7 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RET(0.998)PS(0.002)PR;RET(1)PSPR;RET(0.593)PS(0.407)PR 84.615 0.0086306 13908500.0 1014.4200000000001 1076.72 759.4300000000001 920.31 1161.88 925.01 806.56 1218.83 1146.1299999999999 1277.6000000000001 1219.72 True False 1117.4031716234663 1167.458973149168 810.9694866235743 977.1554585243414 1080.2735570684001 917.4770252460883 837.2540821665671 1194.5194794963625 1097.9621418744382 1196.9321179634205 1069.7021724421265 1.0445927851791106 1.0913869329477597 0.758126427631846 0.9134836627409092 1.009882549459668 0.8576938973130168 0.7826983096193203 1.1166841671166081 1.0264185398144927 1.1189395972066023 1.0 10.062993460587187 -8.278594190037154 24.974438115960353 1.020639649847777 0.9232371868424805 0.26609188068310774 0.10499331909132023 1083.9404305015116 1578026.2576130326 0.016589482561094115 0.020080049913811435 5.265090129325421e-09 8.278594190037154 -0.09740246300529654 RET(ph)VER ddPTM_A549_PD325901_60min_R1 2 RETVER 6 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 RET(1)VER;RET(1)VER 69.598 0.032049 17690000.0 631.25 776.25 625.31 485.61 533.1 167.36 380.82 366.42999999999995 448.84000000000003 661.36 695.03 True False 695.3340352983109 841.667311749612 667.7472968944966 515.6050267996714 495.6568950951596 165.99707564803114 395.31231349269996 359.1212661912258 429.97681568314476 619.6016167315966 609.5457161581769 1.1407414027627618 1.3808108062089959 1.0954835366625995 0.845884095534964 0.8131578681565811 0.2723291645691018 0.6485359555707493 0.5891621525202122 0.7054053605580027 1.0164973689533898 1.0 9.251590617349208 -6.183103190044579 2.519664271552722 0.7742219272918226 1.2609382449782176 0.519945020310342 0.20244560081727522 0.20946405994498368 2.571229726589011 0.032389932237727924 0.1020512180991452 6.559893821760336e-07 6.183103190044579 0.486716317686395 RET(ph)YYLSDSPLLGPPVGEPR ddPTM_A549_MK2206_60min_R1 1 RETYYLSDSPLLGPPVGEPR 20 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 RET(0.867)Y(0.042)Y(0.042)LS(0.048)DS(0.001)PLLGPPVGEPR 62.236999999999995 0.001342 1262800.0 967.03 671.23 900.55 695.8 1046.2 963.16 675.25 677.32 964.51 1004.7 1071.8 True False 1130.2410223864247 705.3927399448652 1028.261531468864 866.2710312356484 892.3053658927598 1065.0809519061363 797.9341844224252 773.3321842055053 746.0500250059749 777.7375722055452 805.6424798248453 1.4029064388860806 0.8755654742761636 1.27632486769121 1.0752549088821437 1.1075699063023041 1.3220268029283853 0.9904321140016153 0.9598949950772648 0.9260311412180917 0.9653631625465344 1.0 9.653995945384676 -7.926829237972155 11.078490770119345 0.9642499859384479 1.1596588468569171 0.37842645617173154 0.1322707640903648 0.3959359904227349 58.02105912482773 0.01850591673149602 0.02557623985492043 1.1835068121466976e-08 7.926829237972155 0.1954088609184692 RET(ph)YYLSDSPLLGPPVGEPR ddPTM_A549_PD325901_60min_R1 3 RETYYLSDSPLLGPPVGEPR 20 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 RET(0.987)Y(0.005)Y(0.005)LS(0.003)DSPLLGPPVGEPR;RET(0.997)Y(0.001)Y(0.001)LSDSPLLGPPVGEPR;RET(0.985)Y(0.004)Y(0.004)LS(0.007)DS(0.001)PLLGPPVGEPR 90.633 6.090100000000001e-09 4299200.0 1838.4899999999998 1894.46 1593.49 1698.32 2083.06 1642.33 1819.47 1764.93 1899.51 1994.83 2092.12 True False 2025.1321513751943 2054.112792807948 1701.6338138337956 1803.221369235432 1936.753051766878 1628.955408992776 1888.7109265021877 1729.7270865891996 1819.6802004239591 1868.8760933601827 1834.8025030413723 1.1037330437572062 1.1195280088200483 0.9274206956951301 0.9827877203385151 1.0555648624614977 0.8878096723176562 1.0293810496614522 0.9427320290450882 0.9917580760913797 1.0185707127946086 1.0 10.841409065323502 -5.746052019254685 24.998395840710856 0.987116813625555 1.1116306226109876 0.5410433128974952 0.04591227197067874 123.05480423425593 199912.15552897556 0.005490191639018071 0.02110427462909406 1.7945186687374462e-06 5.746052019254685 0.12451380898543252 REVLYDS(ph)EGLS(ph)GEER ddPTM_A549_MK2206_60min_R1 3 REVLYDSEGLSGEER 15 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 REVLY(0.004)DS(0.996)EGLS(0.999)GEER;REVLY(0.003)DS(0.998)EGLS(1)GEER;REVLY(0.074)DS(0.936)EGLS(0.99)GEER 49.973 0.0060002 13858100.0 588.59 802.67 297.668 701.6800000000001 1378.6799999999998 884.81 824.37 1031.27 1129.35 1198.67 1053.97 True False 687.9296023561068 843.5224745192331 339.88179840017074 873.5916314996124 1175.877998326352 978.4400069106572 974.1473581818803 1177.4556806319192 873.5540282013646 927.8896144875303 792.2401609078121 0.8683346746368198 1.064730767438825 0.42901359356827734 1.1026853656327915 1.4842443697614838 1.2350295468352455 1.2296111788445874 1.4862357890096058 1.1026379011136933 1.1712226421648206 1.0 9.629794027187344 -6.487405412867834 24.576375196909197 1.1424194908938967 0.8068887893008891 0.4281510368003628 0.21040570365491715 462.15089341886875 320183.56292001787 0.031836394606829486 0.0739487553104608 3.2553267514095295e-07 6.487405412867834 -0.3355307015930076 REVLYDS(ph)EGLS(ph)GEER ddPTM_A549_PD325901_60min_R1 2 REVLYDSEGLSGEER 15 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 REVLYDS(1)EGLS(1)GEER;REVLY(0.011)DS(0.99)EGLS(0.999)GEER 83.06299999999999 6.1563e-05 16738500.0 591.99 560.48 749.25 670.97 877.12 596.95 576.27 682.3299999999999 618.2 744.5 733.4300000000001 True False 652.0883889999956 607.7136166047308 800.098610606262 712.4142930165677 815.5141170997307 592.0886371181416 598.2002701970434 668.7203928724699 592.2192038484095 697.4921429428354 643.2227595958333 1.0137831400893416 0.9447949525084987 1.2438903920455195 1.107570095100818 1.2678564384322408 0.9205032444594753 0.9300048253468525 1.0396404401060964 0.9207062328150956 1.0843710558082584 1.0 9.329174645071292 -7.295439881099853 24.976961140831445 0.9627667237339802 1.1127745356469096 0.30212270054866974 0.09816379770584999 485.167187515626 356405.44045557635 0.013699248710686724 0.02190063941298454 5.0647745577998706e-08 7.295439881099853 0.15000781191292945 REVRS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 REVRSPTK 8 2 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 REVRS(0.998)PT(0.002)K 45.358999999999995 0.010356 781280.0 294.86 226.14 344.34 201.44 314.19 342.43 246.94 331.56 350.71 460.93 276.79 True False 344.6251593651293 237.64956007796394 393.17258980177513 250.79280904298528 267.97306720497636 378.6657153133623 291.8058015568659 378.5596453599145 271.27474496878796 356.80559287021225 208.05540398462318 1.656410517414869 1.1422417083457634 1.8897494718802568 1.2054135784981614 1.2879889782857143 1.8200234555856498 1.4025389197698153 1.8195136396836529 1.3038582020625484 1.7149546997422993 1.0 7.700823950883022 -9.5376553635326 1.114672520193081 1.0633850913731964 1.5101314932272456 0.0 0.31722845829305557 0.31409619273856115 0.8099239681782472 0.06371817164606736 0.046656505600065803 2.8996437011026905e-10 9.5376553635326 0.44674640185404924 REVS(ph)PAPAVAGQSK ddPTM_A549_PD325901_60min_R1 1 REVSPAPAVAGQSK 14 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 REVS(1)PAPAVAGQSK 97.291 3.459e-05 9108400.0 3237.4 3145.7 3610.6 3859.5 3941.3 3552.6 3566.8 3712.7 4119.4 4286.4 3427.6 True False 3566.0584647520814 3410.7991788351105 3855.637028301592 4097.8925494395335 3664.4766847468604 3523.668803460774 3702.53652582785 3638.647285943195 3946.275943599382 4015.755972478401 3006.026929346599 1.186302900329377 1.1346535673173408 1.2826355581384188 1.3632254952320957 1.219043199171667 1.1722013429289841 1.2317043768575442 1.2104506617757096 1.3127879544502814 1.3359015294488 1.0 11.553642218287878 -10.882713193685976 1.06257342613384 0.9961832001663508 1.2396775429897098 0.0 0.1160679334750423 0.27368151009277625 0.5343655281402008 0.05090666164728876 0.011481816490928972 1.3100467869752267e-11 10.882713193685976 0.24349434282335902 REVS(ph)PPGAR ddPTM_A549_MK2206_60min_R1 2 REVSPPGAR 9 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 REVS(1)PPGAR;REVS(1)PPGAR 67.385 0.0020658 10193800.0 701.3199999999999 653.6700000000001 472.9 440.99 749.95 568.26 387.98 415.65000000000003 723.81 803.25 1073.33 True False 819.6856703722192 686.939010949689 539.9643309440072 549.0325697967936 639.6333484527578 628.3928960195407 458.4709439055349 474.56966037473893 559.8681906870582 621.7952671186472 806.7925385989936 1.0159807275803698 0.8514444272657355 0.6692728367092521 0.6805127012579917 0.7928101932666481 0.7788779220873233 0.5682637381620758 0.5882177110844824 0.6939431934500498 0.77070031931431 1.0 9.65605393141523 -10.679648482058319 1.0055059825752928 0.9958777014045685 0.7311539388520374 0.0676128120396925 0.13593249475550553 0.4356560821791395 0.8017303060908098 0.07900682622980908 0.022213026483592746 2.0909878916479712e-11 10.679648482058319 -0.26472376255253116 REVS(ph)PPGAR ddPTM_A549_PD325901_60min_R1 1 REVSPPGAR 9 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 REVS(1)PPGAR 57.175 0.0058704 5558500.0 366.91 283.48 294.06 380.68 268.86 343.21 277.12 250.95 344.89 205.51 338.71 True False 404.158433095134 307.3698544731466 314.0166799264293 404.1937390129917 249.97620111664716 340.4150115509129 287.6659532458828 245.94460538353349 330.39547268728234 192.53406352744398 297.0508172595947 1.3605700089420636 1.0347382892555184 1.057114344351418 1.360688863750084 0.841526724022413 1.145982410320797 0.9684065369680152 0.8279546498220904 1.1122523605062078 0.6481519401415656 1.0 8.21456594752487 -6.760576386471372 24.999999462958776 1.025278797252972 1.1807990467053395 0.2661781586355908 0.17638884292478665 26.032803749414498 754094.5853230283 0.01875367391414533 0.03733019985758628 1.7354959859703074e-07 6.760576386471372 0.15552024945236753 RFDDAVVQSDMK ddPTM_A549_MK2206_60min_R1 2 RFDDAVVQSDMK 12 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 93.348 0.00026739 12897800.0 3949.0 4308.0 4071.0 3622.8 4843.0 3616.1 3628.0 3202.0 5093.6 5656.5 4627.6 False True 4615.494656219547 4527.258799044258 4648.329015168224 4510.386162633674 4130.601115483308 3998.7533018270883 4287.160638407345 3655.893305713735 3939.907732807782 4378.6927213901345 3478.4392047373144 1.3268866823757242 1.301520174013261 1.3363260766028704 1.2966695397438432 1.187486936628879 1.1495826336079566 1.2324954918196145 1.0510154383997123 1.13266539988452 1.258809616516154 1.0 11.764224390535922 -5.825431783867218 0.1470720204582326 0.9315003294112182 1.665088966871215 0.35920339235511756 0.0862801340919658 4.696686224057366 0.1357356313688547 0.12944811238983797 0.6965242313159663 1.494748809281173e-06 5.825431783867218 0.7335886374599968 RFDDAVVQSDMK ddPTM_A549_PD325901_60min_R1 5 RFDDAVVQSDMK 12 1 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;; 102.73 0.00020825 31752300.0 10387.7 10165.099999999999 10929.699999999999 10663.1 12279.8 10950.5 10117.300000000001 11192.400000000001 12581.7 13286.8 13630.400000000001 False True 11442.251656979435 11021.748651421554 11671.455167625301 11321.735469342835 11417.309211010202 10861.322758626708 10502.319387898993 10969.158801732054 12052.934903040328 12447.869180460528 11953.947210224624 0.9571944275605034 0.9220175108347703 0.9763683043239728 0.947112721031507 0.9551078827957835 0.9085971828064159 0.8785649796843671 0.9176181397513412 1.008280753718825 1.0413187344355541 1.0 13.545199456360246 -8.766600748556332 24.99997853370052 1.0039103612482203 0.9325170658667892 0.6352368847714904 0.02780495179492204 63.51716677278142 307655.38028723514 0.004702831709571392 0.005080124718478487 1.7115880728076793e-09 8.766600748556332 -0.07139329538143113 RFDEILEASDGIMVAR ddPTM_A549_MK2206_60min_R1 4 RFDEILEASDGIMVAR 16 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 127.75 5.8811e-10 13656100.0 1364.4499999999998 1784.22 1684.19 1495.19 2035.82 1423.3400000000001 1361.3199999999997 1337.6899999999998 2115.53 2075.3700000000003 2318.06 False True 1594.7358024002938 1875.0291769802107 1923.033466975233 1861.5116171216296 1736.3535748344455 1573.956894063375 1608.6542227885027 1527.3116540038113 1636.3658328072195 1606.542475592936 1742.4217267986398 0.9152409992788083 1.0761052551985857 1.1036555831454375 1.0683473400792551 0.9965174034099405 0.9033156955378501 0.9232289738168561 0.8765453452017892 0.9391330512238978 0.9220170128070226 1.0 10.766878133355041 -6.976213683562461 5.398614364735534 0.9542122081580987 1.0468844578299676 0.4357693910650854 0.05628096718324585 0.1594178915676253 13.413802395537887 0.008755567577808848 0.01647777532305883 1.0562976569172377e-07 6.976213683562461 0.09267224967186893 RFDEILEASDGIMVAR ddPTM_A549_PD325901_60min_R1 7 RFDEILEASDGIMVAR 16 1 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;;; 222.42 9.793899999999998e-55 38355200.0 3810.98 4249.74 3561.23 3848.1100000000006 4844.0199999999995 5080.4800000000005 3786.54 4265.379999999999 4659.07 4793.6 5131.5 False True 4197.867884104806 4607.880504263825 3802.9164832156653 4085.7990150081005 4503.792746161796 5039.106255307775 3930.638851774191 4180.303649774122 4463.265490252357 4490.931277919105 4500.358031258628 0.9327853150676494 1.0238919819841814 0.8450253194971007 0.9078831032173262 1.0007632092556438 1.1197123029561438 0.8734058100428285 0.9288824624037756 0.9917578688742911 0.9979053325815309 1.0 12.13582406596533 -7.6360444920095345 0.22476385028056906 1.009445134097665 0.9239538470594141 0.056539931648591835 0.0717907022605795 7.55838332898099 0.9600573215075334 0.09606841567493644 0.21074856326733324 2.311827939043716e-08 7.6360444920095345 -0.08549128703825082 RFEKPLEEK ddPTM_A549_MK2206_60min_R1 2 RFEKPLEEK 9 2 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ; 84.17 0.00045799 6680200.0 3472.9 3913.9 4068.4 3933.2 5436.7 4991.3 4457.9 5033.7 5439.5 5480.5 5210.700000000001 False True 4059.0406157469915 4113.100792381458 4645.360296072317 4896.834176568056 4636.968631952943 5519.476053043211 5267.842726007745 5747.242390059722 4207.46193509658 4242.451243627442 3916.7393819960093 1.0363315553761618 1.0501338974168306 1.1860274179654495 1.2502323231096832 1.1838849052014018 1.409201765737712 1.344956151594442 1.4673537934328607 1.0742256567891468 1.0831589314133652 1.0 11.935437419892073 -8.973955827459774 23.319954160045334 1.0327462671882899 1.2421995102049517 0.3042225835531832 0.12743915637003603 71.2129824818159 63765.15781578621 0.024049686102660135 0.02503797271193045 1.0618035488420794e-09 8.973955827459774 0.2094532430166618 RFEKPLEEK ddPTM_A549_PD325901_60min_R1 2 RFEKPLEEK 9 2 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ; 106.62 0.00017308 12164200.0 5482.6 6017.6 5733.6 5930.0 7405.299999999999 6995.299999999999 6430.8 6030.8 6772.9 5931.5 6830.8 False True 6039.189515923199 6524.724270769036 6122.716574937684 6296.2826319928545 6885.177274898114 6938.332596084326 6675.527613068783 5910.51096292892 6488.2585663941945 5556.984077723873 5990.654904008853 1.0081017205450888 1.0891504143232806 1.022044613326075 1.0510174151042284 1.1493196295267585 1.1581926696263711 1.1143235122092616 0.986621839788117 1.083063316174723 0.9276087784668127 1.0 12.548498013071686 -10.817410712629682 0.6118218338121258 0.987371063862999 1.0775571389805145 0.32326086843309376 0.056683885223721434 1.5453442691575274 0.7871525947464539 0.07836718919742905 0.011443771047389131 1.5226121372248568e-11 10.817410712629682 0.09018607511751553 RFGEYNSNMS(ph)PEEK ddPTM_A549_MK2206_60min_R1 1 RFGEYNSNMSPEEK 14 1 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 RFGEYNSNMS(1)PEEK 88.992 3.109e-05 5024100.0 2262.1 2485.6 2292.1 2404.2 3410.4 2416.6 2254.4 2230.8 3504.4 3895.0 4312.0 True False 2643.887176964863 2612.1064231440137 2617.154246049395 2993.229107928638 2908.734677729563 2672.3230079907457 2663.9952985737364 2547.0227315384777 2710.658995376866 3015.1167948050147 3241.211394854203 0.8157095773396141 0.805904368746523 0.807461756491548 0.9234908629164807 0.89742208186344 0.8244827882048567 0.8219134681567319 0.7858243172852503 0.8363104608605135 0.9302437969926493 1.0 11.662317402313251 -10.540906574836802 0.798201518837835 1.0026166806421497 0.8361220081060804 0.5515607613867894 0.04348207544871805 0.31151437788800523 0.34853844485883767 0.03111347937093239 0.00828151665537302 2.878017465504464e-11 10.540906574836802 -0.1664946725360693 RFIGS(ph)PR ddPTM_A549_MK2206_60min_R1 4 RFIGSPR 7 1 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 RFIGS(1)PR;RFIGS(1)PR;RFIGS(1)PR;RFIGS(1)PR 91.265 0.0051967 61829000.0 953.4000000000001 1402.55 1620.8200000000002 1407.4099999999999 2127.44 1497.6399999999999 1044.82 1684.6100000000001 2241.38 2412.0 2204.83 True False 1114.3106116079302 1473.9338042245886 1850.6766480876827 1752.2255131810348 1814.4963942027262 1656.119270747026 1234.6502696308607 1923.4086264017546 1733.711008748373 1867.127524793247 1657.309860787659 0.6723610581055367 0.8893531856040979 1.1166750961151728 1.0572709151372972 1.0948443843448574 0.9992816128903816 0.7449724996169855 1.1605606603267469 1.0460994951930132 1.126601348951046 1.0 10.694627647528606 -5.404364205630986 3.117900592335212 1.023323727660826 0.6642714529289937 0.5058006898362746 0.10675772185708687 0.1675190976253817 2.638895476282848 0.013391454188511873 0.11956855217038763 3.941266431462675e-06 5.404364205630986 -0.3590522747318323 RFIGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RFIGSPR 7 1 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 RFIGS(1)PR;RFIGS(1)PR 89.88600000000001 0.0052699 98027000.0 2741.3 2367.3 2486.65 2626.7 2986.96 3329.7 3348.2 3011.6 2985.1 3053.08 3157.6000000000004 True False 3019.5947579615995 2566.800679040073 2655.409022441188 2788.945293331473 2777.1662340525945 3302.584027158517 3475.617583205339 2951.5312754455053 2859.6466279648776 2860.308007758107 2769.2352176755835 1.0904074665409464 0.92689875625465 0.9588961621938573 1.0071175158867267 1.002863973535505 1.1925978718162522 1.2550821111262165 1.065829026225853 1.0326485123806792 1.0328873435890245 1.0 11.435271885482017 -4.8750784582807665 19.566494568855042 1.0350791203537306 16.48266051871515 0.0014413457831607968 0.09279830893121939 1964.272805765074 307307.98658287973 0.013333966279773382 1581.3337245752543 1.3332805441180539e-05 4.8750784582807665 15.44758139836142 RFIQENVFVAANHNGS(ph)PLSIK ddPTM_A549_MK2206_60min_R1 2 RFIQENVFVAANHNGSPLSIK 21 1 E9PFD2;P11172-4;P11172-2;P11172-3;P11172 E9PFD2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 RFIQENVFVAANHNGS(0.998)PLS(0.002)IK;RFIQENVFVAANHNGS(0.988)PLS(0.012)IK 83.936 1.5639e-05 4685100.0 1509.3400000000001 1998.4299999999998 2294.66 1708.25 3374.0 2161.3999999999996 1959.44 2088.2 3011.2 2994.7 2927.3 True False 1764.079692179898 2100.1415510153242 2620.077292543826 2126.7713266862556 2877.689069510775 2390.117913378796 2315.4448845978177 2384.2087448442912 2329.1680078983036 2318.195190090523 2200.3706206300344 0.8017193447505617 0.9544490056924995 1.190743626541249 0.9665514103607215 1.3078201656259176 1.086234242072561 1.0522976733505167 1.0835487087905302 1.0585344060044715 1.0535476016430139 1.0 11.10353083000832 -5.444206259621467 3.893132853497929 1.0606194035178738 0.8127301269592215 0.4490370811360612 0.09201612488584562 0.1728129331130314 4.606969449640541 0.012524057364653535 0.08563926722466553 3.5957851985129117e-06 5.444206259621467 -0.24788927655865223 RFIQENVFVAANHNGS(ph)PLSIK ddPTM_A549_PD325901_60min_R1 1 RFIQENVFVAANHNGSPLSIK 21 1 E9PFD2;P11172-4;P11172-2;P11172-3;P11172 E9PFD2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 RFIQENVFVAANHNGS(0.999)PLS(0.001)IK 84.404 1.3204000000000001e-05 4399900.0 1972.7 1376.5 1305.7 1571.1 2126.8 2057.7 1460.2 1709.7 1845.1 1645.3 1594.8 True False 2172.967051775014 1492.5024858271695 1394.3126538119402 1668.1432787730155 1977.4209050616864 2040.9427734282601 1515.7687100520998 1675.5986922662964 1767.5568635080879 1541.4154772113457 1398.6497102701476 1.5536177756439875 1.0671024166150183 0.9968991117458783 1.1926812457215006 1.413807110201846 1.4592236772665934 1.0837371923233952 1.1980116822407638 1.263759503561965 1.102073997436873 1.0 10.449818971586243 -10.792264964663381 0.6946044156400997 0.9716717600201422 1.2422156827379311 0.1623682315633742 0.16615276447810007 1.1911510210063985 0.8425373405260398 0.19435704690548083 0.03271174302455133 1.6133739311159814e-11 10.792264964663381 0.27054392271778893 RFIVS(ph)PVPESR ddPTM_A549_PD325901_60min_R1 1 RFIVSPVPESR 11 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4;H0YH68 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 RFIVS(0.998)PVPES(0.002)R 61.211999999999996 0.0033075 2290200.0 644.37 438.02 520.12 455.01 464.11 539.66 395.77 363.25 631.56 405.65 553.04 True False 709.7859680398776 474.9334826313236 555.4184709356408 483.1149342973138 431.51251469258034 535.2651878837025 410.8312439236541 356.0046937858878 605.0177295090607 380.037189771338 485.01958600940674 1.463417124821247 0.9792047503461283 1.145146478527712 0.9960730416522685 0.8896805967011224 1.1035949955912117 0.8470405232577272 0.73400065493228 1.2474088613347805 0.7835501920616611 1.0 8.92189919700873 -5.255210126573239 24.45152339868079 1.0508299819923024 1.4634173755549131 0.34439984133510404 0.16524191100855065 457.5418101656084 1795906.9392630372 0.022487695745880477 0.2856453181065831 5.556353567716705e-06 5.255210126573239 0.41258739356261076 RFKDHVEGK ddPTM_A549_MK2206_60min_R1 1 RFKDHVEGK 9 2 E9PLK3;P55786-2;P55786 E9PLK3 NPEPPS Puromycin-sensitive aminopeptidase 0 49.368 0.0089924 679670.0 333.9 399.29 225.29 258.67 342.2 400.46 0.0 330.19 563.11 525.12 405.31 False True 390.2541569287686 419.61215549451754 257.23950966034124 322.0441616121374 291.862833309599 442.8364113961657 0.0 376.9954436644653 435.566484101891 406.495027288321 304.66034101306974 1.2809483362064082 1.3773113825685517 0.8443485253280991 1.0570596768232525 0.9579941791540182 1.4535413763525207 0.0 1.2374286801191903 1.4296789751285857 1.3342564573276134 1.0 8.251057900013668 -13.238830300956423 10.324754082650422 0.798325244867369 1.1218794389458147 0.0 0.39718276915947087 0.0 0.0 0.0 0.050324281932938864 5.769918768991387e-14 13.238830300956423 0.32355419407844566 RFNPQYHNNR ddPTM_A549_MK2206_60min_R1 2 RFNPQYHNNR 10 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 0 ; 53.751000000000005 0.006461499999999999 2287080.0 823.25 776.45 702.55 500.74 770.6500000000001 818.5899999999999 413.26 455.92 618.03 1300.74 1380.49 False True 962.1944734699279 815.9679885139082 802.1821541651773 623.4213224790725 657.2884058738821 905.2126504639353 488.34399267591505 520.548056196442 478.047191791109 1006.9019305968362 1037.6762334142575 0.9272588525074217 0.7863415988907595 0.7730563043983035 0.6007859700398404 0.633423398077849 0.8723459411665638 0.4706130649914963 0.5016478545371392 0.46069012317858943 0.9703430590135376 1.0 10.019140661585496 -11.019703068017451 1.3408520316070487 0.9978438747392475 0.6451700997246221 0.38108775119119886 0.15239034284767966 0.3684899000625564 1.1917253245517487 0.11546874470945823 0.02678835662561179 9.556457483687652e-12 11.019703068017451 -0.3526737750146254 RFPEAEALS(ph)PEQAAHYLR ddPTM_A549_MK2206_60min_R1 3 RFPEAEALSPEQAAHYLR 18 1 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR 94.20100000000001 7.909e-07 53522000.0 2010.0699999999997 2714.21 2520.31 1936.1960000000001 3147.9799999999996 2844.7 2607.7000000000003 2546.7199999999993 4066.88 3314.1400000000003 3133.8600000000006 True False 2349.3206745067687 2852.351695671752 2877.727855617446 2410.564106919142 2684.9163121038887 3145.724265840967 3081.4853353844633 2907.7253590028977 3145.738173472853 2565.473472229806 2355.6360718640512 0.9973190267237311 1.2108626327048229 1.2216351625742663 1.0233177084147915 1.1397840032137363 1.335403334756929 1.3081330228340562 1.2343695164686324 1.3354092387384702 1.0890788704045047 1.0 11.201900955463715 -5.255915926664345 23.643669406913094 1.1831332073353902 0.9973188507713924 0.19560391725884085 0.11146942443541455 467.60996685655556 2001509.140031299 0.01921546417466521 0.2260236085307167 5.547330911295118e-06 5.255915926664345 -0.1858143565639978 RFPEAEALS(ph)PEQAAHYLR ddPTM_A549_PD325901_60min_R1 4 RFPEAEALSPEQAAHYLR 18 1 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR 131.09 3.3814e-13 132970000.0 6741.81 6914.3099999999995 6887.280000000001 7031.889999999999 8291.48 7781.8099999999995 7749.33 7789.2300000000005 7951.030000000001 8643.56 9045.340000000002 True False 7426.233588141791 7497.003169473052 7354.692237379099 7466.233874719102 7709.11504885315 7718.4375194108825 8044.234993746087 7633.867697117275 7616.875859551628 8097.804146480823 7932.820523134551 0.9361403761101873 0.9450614882322724 0.9271219758382973 0.941182754979173 0.9718000081271212 0.9729751854213188 1.0140447486851136 0.9623144346773714 0.9601724679561916 1.0207975993992464 1.0 12.953618193625003 -6.817919883947546 2.727553145360138 0.981251200862796 0.9362621742630219 0.597336218468287 0.019127567850966747 0.15512059995562028 2.3512617390599213 0.0027023031417524007 0.005691763117925385 1.5208280571344217e-07 6.817919883947546 -0.04498902659977411 RFPTDYAST(ph)SEDEFGSNR ddPTM_A549_MK2206_60min_R1 2 RFPTDYASTSEDEFGSNR 18 1 H0Y2V6;Q5SW79;Q5SW79-3 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 RFPTDYAS(0.007)T(0.496)S(0.496)EDEFGSNR;RFPTDYAS(0.011)T(0.585)S(0.404)EDEFGSNR 92.95 2.6751e-06 7715700.0 2889.7 3107.6 2885.4 2058.7799999999997 3990.3999999999996 3337.4 2916.7 2794.0 4304.8 4278.1 4735.4 True False 3377.410713618039 3265.763566367207 3294.593107434632 2563.1811924221474 3403.417446050915 3690.5614528131737 3446.6266356236765 3190.0580562661403 3329.769673353021 3311.6742387305108 3559.469489608671 0.9488522723618997 0.9174860399565459 0.9255854326192976 0.7201020264129148 0.95615862307197 1.0368290734299608 0.9682978448573805 0.8962172777654166 0.935467963153997 0.9303842183219828 1.0 11.797446519746003 -6.967323359925303 24.999999290326066 0.9679992500346437 0.87846308729171 0.2656011073276031 0.06547982185608739 188.09496198533245 143905.50282644658 0.009444684060551737 0.017848699358770623 1.078143676615523e-07 6.967323359925303 -0.08953616274293374 RFPTDYASTS(ph)EDEFGSNR ddPTM_A549_PD325901_60min_R1 1 RFPTDYASTSEDEFGSNR 18 1 H0Y2V6;Q5SW79;Q5SW79-3 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 RFPTDYAS(0.038)T(0.203)S(0.759)EDEFGSNR 96.881 8.3545e-07 6409400.0 1573.1 1653.0 1497.9 1281.3 1839.4 1850.7 1733.4 1719.0 2319.6 1738.1 2128.9 True False 1732.7999539449875 1792.3041112040048 1599.5565016044309 1360.4429909565672 1710.2068895855127 1835.6285127976284 1799.3654855528755 1684.7131964705886 2222.1152786262865 1628.356069373998 1867.0587962090021 0.9280907261535509 0.9599612582331183 0.8567252969495522 0.7286556768961424 0.9159898408438064 0.9831658845049809 0.9637433428483476 0.9023353736322285 1.1901688812040703 0.8721503964847376 1.0 10.86655164536145 -8.740841905788857 24.93712976737832 1.0898019662217735 0.9041414049678816 0.1181419151798393 0.10098784466979867 156.030078240654 188903.7885872886 0.016178893157460333 0.018335271698165734 1.8161766768466857e-09 8.740841905788857 -0.18566056125389185 RFPTDYASTSEDEFGS(ph)NRNSPK ddPTM_A549_PD325901_60min_R1 2 RFPTDYASTSEDEFGSNRNSPK 22 2 H0Y2V6;Q5SW79;Q5SW79-3 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 RFPTDYAST(0.001)S(0.005)EDEFGS(0.556)NRNS(0.439)PK;RFPTDYAS(0.004)T(0.038)S(0.043)EDEFGS(0.458)NRNS(0.458)PK 88.51700000000001 4.3761e-07 16258200.0 5351.7 5873.5 6222.1 5522.5 7441.6 6867.3 5975.4 6585.200000000001 6497.5 6547.0 6629.1 True False 5895.000644286687 6368.480458050042 6644.369122526824 5863.612282492504 6918.927688126314 6811.374985646057 6202.797116864342 6453.853020010542 6224.432670664901 6133.621302681993 5813.762725327209 1.0139733805450248 1.095414580699389 1.1428689880275198 1.0085744051693284 1.1900946108420523 1.171594939018207 1.0669161109452117 1.1100991431753533 1.0706375483038961 1.0550174804969843 1.0 12.505256477226872 -9.798890590727941 0.7233215923063037 1.0059109865028213 1.1029158540806607 0.1734150429151894 0.0562889736505198 0.5299333631440799 0.5803191066643492 0.02364618522544332 0.011803930072400218 1.5889469923146712e-10 9.798890590727941 0.09700486757783944 RFQS(ph)MPDGFVFK ddPTM_A549_MK2206_60min_R1 2 RFQSMPDGFVFK 12 1 P30305-3 P30305-3 CDC25B M-phase inducer phosphatase 2 1 RFQS(1)MPDGFVFK;RFQS(1)MPDGFVFK 82.55 0.00026778 2861200.0 950.7 1066.57 1002.1199999999999 1188.26 1434.93 1248.73 1043.23 1137.22 1686.1599999999999 1601.54 1301.0 True False 1111.154917616593 1120.8538573111966 1144.2356847655074 1479.3837533430183 1223.8536978402772 1380.869779760112 1232.7713872121535 1298.424417590185 1304.2474522442228 1239.7510016821636 977.9257942266509 1.1362364344784468 1.1461543032491275 1.1700639164246356 1.5127771064806845 1.2514791051279177 1.4120394286686255 1.2605980888223078 1.3277330706027508 1.3336875455623185 1.267735250467103 1.0 9.933581186278541 -10.741675880157905 0.9282576272116858 0.9949853142129828 1.2879945977022202 0.032683786213482 0.13294029577444139 0.41384916108319847 0.616155561796096 0.08285700825099733 0.019877633409344866 1.8126924247832774e-11 10.741675880157905 0.2930092834892375 RFQS(ph)MPDGFVFK ddPTM_A549_PD325901_60min_R1 2 RFQSMPDGFVFK 12 1 P30305-3 P30305-3 CDC25B M-phase inducer phosphatase 2 1 RFQS(1)MPDGFVFK;RFQS(1)MPDGFVFK 65.374 0.0024776 4930500.0 1390.22 1751.62 1591.29 1955.91 2276.03 1897.4299999999998 1944.19 1700.33 2151.0 1738.03 1883.24 True False 1531.354110974127 1899.2351647109244 1699.284508604122 2076.722118506097 2116.169504677238 1881.9779591709107 2018.1772143515889 1666.4155842669188 2060.6009503039945 1628.2904891859446 1651.6134188419574 0.9271867699209231 1.1499271821384143 1.028863346118603 1.2573899526453403 1.2812741047847673 1.1394784867335817 1.2219428537742512 1.008962245799226 1.2476290921327111 0.9858786993433574 1.0 10.689660329781974 -4.603634701479874 1.628200512596686 1.1368627844048511 3.155742296162355e-08 0.2265294287244799 0.10691949035133999 9.672299045272593 5.062071314620451 0.01610613529506517 29.57110352999339 2.4909516538272483e-05 4.603634701479874 -1.1368627528474282 RFQS(ph)MPVR ddPTM_A549_MK2206_60min_R1 1 RFQSMPVR 8 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 RFQS(1)MPVR 136.96 0.0004545 8736200.0 649.5 683.03 626.53 526.71 864.04 759.02 622.23 631.93 1041.0 898.39 858.16 True False 759.1197212495813 717.7933095429895 715.3813750610035 655.7539736449107 736.9408605868666 839.338992603301 735.2811367244218 721.5080127044598 805.2151621354054 695.4430750410473 645.0551879888872 1.176829107624601 1.1127626331955887 1.1090235198190947 1.0165858454520451 1.1424462190350797 1.3011894303495795 1.1398732238970677 1.1185213701697874 1.2482887931586986 1.0781140714630268 1.0 9.333278786018909 -5.249806360585401 21.601125647719275 1.126844448412806 1.1768293041936773 0.02891810235956438 0.08353787791775738 1143.8816124275465 2123762.280170216 0.014127402635154317 0.2692972293950858 5.625921129137549e-06 5.249806360585401 0.04998485578087131 RFQS(ph)MPVR ddPTM_A549_PD325901_60min_R1 1 RFQSMPVR 8 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 RFQS(1)MPVR 121.9 0.00048971 13974000.0 1395.2 1171.2 1180.1 1275.1 1380.9 1486.7 1544.3 1354.1 1207.0 1482.5 1829.8 True False 1536.8396769080448 1269.9011343267582 1260.188682517784 1353.8600310377892 1283.9103478463812 1474.5928081138136 1603.0691815733855 1327.0914132291 1156.2739874555652 1388.8946969949666 1604.7462000578853 0.9576839483107105 0.7913407953737178 0.7852884664704782 0.8436599077093647 0.8000706577775781 0.9188947187166563 0.9989549634176176 0.8269790033970669 0.7205338684795496 0.8654918123157839 1.0 10.64812942944195 -7.25106332340583 24.041864926980864 0.8756256184811477 0.8308011448725444 0.07539463090052967 0.0852330763865042 1450.3685553595135 3360577.04392642 0.016993792022903197 0.029202687115290258 5.60966176976308e-08 7.25106332340583 -0.04482447360860331 RFS(ph)AGQWEAR ddPTM_A549_PD325901_60min_R1 1 RFSAGQWEAR 10 1 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 RFS(1)AGQWEAR 61.375 0.0031579999999999998 1159800.0 617.96 353.97 602.44 520.19 536.4 539.36 588.08 612.84 756.4 643.67 590.81 True False 680.6948442818924 383.800294157823 643.3252011660143 552.3209548627934 498.72511447954116 534.9676309842378 610.4597062097238 600.6164254363208 724.6111384518555 603.0285663505908 518.1441154531641 1.3137172149230392 0.7407211289510733 1.2415951122080542 1.0659601033579984 0.9625220080775418 1.032468795899303 1.1781658577282526 1.1591686704982207 1.3984741249413153 1.1638240180016086 1.0 9.017209611494382 -7.789642105197518 7.179894969761284 1.1898581305834461 1.0491228965114117 0.11648716357806699 0.16279639495563716 0.31446163584111586 56.41293339200568 0.028936188154856417 0.04052847958969691 1.623147154721462e-08 7.789642105197518 -0.14073523407203448 RFS(ph)DATSK ddPTM_A549_PD325901_60min_R1 2 RFSDATSK 8 1 B8ZZD4;Q86VP1-2;Q86VP1;Q86VP1-3;Q86VP1-4 B8ZZD4 TAX1BP1 Tax1-binding protein 1 1 RFS(0.854)DAT(0.131)S(0.015)K;RFS(0.992)DAT(0.007)S(0.001)K 62.466 0.0043286 6207200.0 3452.3999999999996 3498.8 3305.7 3155.8 4110.6 3905.5 3635.0 3484.0 4070.7 4083.9 4844.5 True False 3802.88510647745 3793.656155039669 3530.0446807889484 3350.7265986581897 3821.8856368001557 3873.694902864398 3773.331914148321 3414.5088868548737 3899.6226352405683 3826.041857037266 4248.657211815729 0.8950792960894646 0.8929070917958081 0.8308612591695363 0.7886554343192599 0.8995514220754971 0.9117456904010656 0.8881234060621543 0.8036677746933674 0.917848261421402 0.900529665325047 1.0 12.052791234158647 -9.68225740340032 0.697030015238055 0.993933837886104 0.8630675684544151 0.22361042316435664 0.04932540064517553 0.3214524014079689 0.3334047317005215 0.0185301120296542 0.009907988991599514 2.078464430162925e-10 9.68225740340032 -0.1308662694316889 RFS(ph)DFLGLHSK ddPTM_A549_MK2206_60min_R1 2 RFSDFLGLHSK 11 1 O60749;O60749-2;D6RC15 O60749 SNX2 Sorting nexin-2 1 RFS(1)DFLGLHSK;RFS(1)DFLGLHSK 70.26 0.0013106 5467900.0 1205.22 1518.3899999999999 1476.8899999999999 1175.95 2143.62 1454.62 1390.63 1467.19 1854.8400000000001 1978.65 2231.45 True False 1408.6316712000314 1595.6695654319437 1686.3352098284934 1464.0578027904012 1828.2963376362438 1608.5469229013909 1643.289470393718 1675.1686755809299 1434.7217015708322 1531.6715907678938 1677.319380113036 0.8398112416164312 0.951321247671037 1.0053751419213017 0.8728557126024127 1.0900108585837918 0.9589985914268692 0.9797117292491876 0.9987177728000965 0.8553658406272902 0.9131663348841013 1.0 10.711941704771732 -5.2613598847835865 17.54001125505459 0.9511442579564924 0.8398089902492918 0.21785701942570634 0.06360230978904695 0.17423958786342722 31390.210248148374 0.009623276334898012 0.07665190556055959 5.47822814999602e-06 5.2613598847835865 -0.11133526770720059 RFS(ph)DFLGLHSK ddPTM_A549_PD325901_60min_R1 4 RFSDFLGLHSK 11 1 O60749;O60749-2;D6RC15 O60749 SNX2 Sorting nexin-2 1 RFS(1)DFLGLHSK;RFS(0.999)DFLGLHS(0.001)K;RFS(1)DFLGLHSK;RFS(1)DFLGLHSK 78.814 0.00022453 11575700.0 2244.65 2087.09 1968.1899999999998 2554.38 2241.05 2379.35 2119.08 2051.63 2755.96 2616.94 1964.98 True False 2472.5252155760077 2262.9763989429916 2101.7632090879392 2712.1582511821102 2083.64637920279 2359.9733624709797 2199.7227490050686 2010.7086301773998 2640.1365853090615 2451.7059617902255 1723.299917034508 1.4347619884011733 1.3131645725586585 1.219615453069074 1.573816736351529 1.209102581974456 1.3694501689131822 1.2764596152191543 1.1667781158125226 1.5320238567946234 1.4226809492390473 1.0 10.750958089628524 -11.010729304106226 1.2734801279586316 0.9986299912986522 1.3568077863199506 0.0 0.17425723712133875 0.29507190117605775 0.8466442825423705 0.09186564657400922 0.020500014287078393 9.755975385127703e-12 11.010729304106226 0.35817779502129843 RFS(ph)DGAASIQAFK ddPTM_A549_MK2206_60min_R1 2 RFSDGAASIQAFK 13 1 H0Y4E8;Q9Y2K2-7;Q9Y2K2-8;Q9Y2K2 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 RFS(1)DGAASIQAFK;RFS(0.938)DGAAS(0.062)IQAFK 87.429 8.1182e-05 7049600.0 2310.2 2372.0 2688.4 2867.3 3596.4 3133.1 2321.5 2607.9 3838.7 3837.8 3735.1 True False 2700.105281032767 2492.724668368844 3069.6555451678346 3569.78862871799 3067.374324122271 3464.642562416538 2743.2865000172674 2977.5778113587903 2969.2405791442666 2970.8383145321404 2807.5715864842127 0.9617226837709878 0.8878579197655877 1.0933489852744296 1.2714862359710175 1.0925364606511767 1.2340353418219137 0.9771029573114299 1.060552765846825 1.0575832129938685 1.0581522939019263 1.0 11.455107093093517 -9.837395493155402 0.6788338625432608 1.004382614244573 1.0776553792191739 0.01595821924911256 0.10652637367931231 1.6084711212720688 1.5405063217784514 0.05439492448713308 0.025180323003595927 1.4541342604198476e-10 9.837395493155402 0.07327276497460078 RFS(ph)DGAASIQAFK ddPTM_A549_PD325901_60min_R1 2 RFSDGAASIQAFK 13 1 H0Y4E8;Q9Y2K2-7;Q9Y2K2-8;Q9Y2K2 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 RFS(1)DGAASIQAFK;RFS(0.967)DGAAS(0.033)IQAFK 86.367 5.9266999999999995e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RFS(ph)DQAAGPAIPTSNSYSK ddPTM_A549_MK2206_60min_R1 1 RFSDQAAGPAIPTSNSYSK 19 1 Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 RFS(0.992)DQAAGPAIPT(0.006)S(0.001)NSYSK 53.262 0.0050396 4619000.0 2120.0 2582.0 2403.2 2367.9 3428.2 2245.9 2159.9 2260.6 3758.6 3986.9 3724.3 True False 2477.8041709763106 2713.412771386322 2744.0098966475725 2948.035606299069 2923.9163213090787 2483.5596472922357 2552.325871801551 2581.0469727971476 2907.2831012508505 3086.2565209776926 2799.4535245490492 0.8851028064041351 0.9692651610722536 0.980194838951503 1.0530753879094865 1.0444596760291203 0.8871587349149869 0.9117228949934766 0.9219824334154346 1.0385180806740384 1.1024496366571555 1.0 11.450929513843489 -8.772482611527073 24.99886061289666 1.018189095000349 0.960158748066804 0.2816936964506508 0.059417120568131004 277.04595268317024 627154.1946589442 0.010042731621812887 0.010739471880579596 1.6885634655778814e-09 8.772482611527073 -0.05803034693354492 RFS(ph)DQAGPAIPTSNSYSK ddPTM_A549_MK2206_60min_R1 2 RFSDQAGPAIPTSNSYSK 18 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14 E7ETY4 MARK2 Serine/threonine-protein kinase MARK2 1 RFS(1)DQAGPAIPTSNSYSK;RFS(1)DQAGPAIPTSNSYSK 98.015 5.535800000000001e-07 38041000.0 5977.1 6496.6 6747.5 5986.6 8420.5 6590.700000000001 5513.9 6300.299999999999 9006.5 9495.6 9695.900000000001 True False 6985.888353935139 6827.24919077784 7704.396961397103 7453.317268748686 7181.855604568897 7288.123499447411 6515.704256922341 7193.386818859535 6966.542130425105 7350.537365019387 7288.140436773387 0.9585282301486412 0.9367614757160755 1.0571142293750861 1.0226637828137717 0.9854167420171799 0.999997676042864 0.8940146411074072 0.9869989308334732 0.9558737500823105 1.008561433302131 1.0 12.831335043676429 RFS(ph)DQAGPAIPTSNSYSK ddPTM_A549_PD325901_60min_R1 2 RFSDQAGPAIPTSNSYSK 18 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14 E7ETY4 MARK2 Serine/threonine-protein kinase MARK2 1 RFS(1)DQAGPAIPTSNSYSK;RFS(1)DQAGPAIPTSNSYSK 106.45 1.9656e-09 56366000.0 6053.8 5650.6 5865.2 5660.8 6951.5 7033.3 5993.5 6514.5 8239.1 7478.1 7578.299999999999 True False 6668.3773194279875 6126.795892782428 6263.24774231277 6010.454759390415 6463.250621373103 6976.023136683185 6221.585922269047 6384.563186973618 7892.839279242039 7005.931489779467 6646.21714280177 1.0033342540801904 0.9218470840089984 0.9423778380602901 0.9043422190772202 0.9724705772475656 1.0496231144416661 0.9361093368740407 0.9606311454762597 1.187568673977261 1.054123171008231 1.0 12.698317713672424 -8.722861758573785 23.2457990940156 1.0885740691883818 0.9599657020766076 0.4729094862168719 0.055868127924568724 58.083823581533146 34999.439838777 0.012641406060706814 0.014333769418081498 1.8929460714307915e-09 8.722861758573785 -0.12860836711177426 RFS(ph)DS(ph)EGEETVPEPR ddPTM_A549_MK2206_60min_R1 2 RFSDSEGEETVPEPR 15 1 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 2 RFS(0.999)DS(0.999)EGEET(0.002)VPEPR;RFS(0.999)DS(0.986)EGEET(0.015)VPEPR 48.111999999999995 0.0068556 4251800.0 429.35 137.89 322.06 238.42000000000002 322.35 597.23 359.40999999999997 236.74 537.94 439.41999999999996 518.77 True False 501.8137834003203 144.90801202419055 367.7329507799256 296.8329107030804 274.93274201446275 660.4284821908108 424.7101447216049 270.2986199858434 416.0974489136603 340.1547168095559 389.9450916763716 1.2868831897409603 0.3716113245617015 0.9430377728285895 0.7612171996498213 0.7050550138547161 1.693644813816306 1.0891537136569114 0.6931709765183381 1.0670667686182684 0.8723143952068555 1.0 8.607127181587671 RFS(ph)DSEER ddPTM_A549_MK2206_60min_R1 3 RFSDSEER 8 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 RFS(0.997)DS(0.003)EER;RFS(0.989)DS(0.011)EER;RFS(0.991)DS(0.009)EER 123.62 0.0004747 261921000.0 5456.200000000001 6137.08 5068.3099999999995 5507.72 6812.66 6080.15 4667.07 6746.66 8186.7699999999995 8360.59 8339.12 True False 6377.073168717422 6449.431158411913 5787.072569606305 6857.111647250949 5810.526738676129 6723.547437323071 5515.016207467407 7703.019715779712 6332.479666585278 6471.9269123180675 6268.286355996427 1.0173551121538866 1.028898616324731 0.923230407951963 1.0939372035374924 0.926972127416867 1.0726292730534124 0.8798283764096994 1.2288876541849076 1.0102409665007472 1.0324874367181442 1.0 12.61385537304619 RFS(ph)DSEGEETVPEPR ddPTM_A549_MK2206_60min_R1 4 RFSDSEGEETVPEPR 15 1 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 RFS(0.998)DS(0.002)EGEETVPEPR;RFS(0.633)DS(0.366)EGEETVPEPR;RFS(0.999)DS(0.001)EGEETVPEPR;RFS(0.998)DS(0.002)EGEETVPEPR 207.21 8.149800000000001e-40 135657000.0 5531.09 6887.429999999999 5873.0 5658.7 8605.720000000001 6501.639999999999 6092.78 5476.969999999999 9825.77 9323.810000000001 9924.529999999999 True False 6464.602769832718 7237.970768407933 6705.87971163915 7045.081754028697 7339.829987928349 7189.639229360651 7199.759259778253 6253.3472700171615 7600.248783530454 7217.554845332729 7459.995297906392 0.8665692821075872 0.970237979967525 0.8989120560868342 0.9443815274261449 0.9838920394478309 0.9637592172984861 0.9651157905955822 0.838250832647593 1.0188007471885971 0.9675012593316644 1.0 12.864959005800875 RFS(ph)DSEGEETVPEPR ddPTM_A549_PD325901_60min_R1 4 RFSDSEGEETVPEPR 15 1 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 RFS(0.751)DS(0.249)EGEETVPEPR;RFS(0.981)DS(0.019)EGEETVPEPR;RFS(0.916)DS(0.084)EGEETVPEPR;RFS(0.848)DS(0.15)EGEET(0.002)VPEPR 243.83 6.322699999999999e-65 172911000.0 6293.000000000001 6537.67 6030.490000000001 6279.01 6978.59 6169.209999999999 6482.73 7573.76 7545.469999999999 7579.69 8106.189999999999 True False 6931.860727338252 7088.622394854858 6439.755315682287 6666.850187033637 6488.437913228529 6118.969999155057 6729.433837635969 7422.695415300224 7228.360135978743 7101.107079842011 7109.180019372188 0.9750577012326669 0.9971082987825162 0.9058365800463978 0.9377804710060481 0.9126844299269163 0.8607138914025451 0.9465836874714906 1.0441000783597716 1.0167642563955046 0.9988644345046576 1.0 12.795467452072746 -8.129000295690068 5.962090868279007 1.010704686319894 0.9305891204765673 0.5515425086494525 0.03531951743628495 0.14334126833577934 6.416287179352911 0.005906775832071791 0.007657368187686597 7.4301863201114805e-09 8.129000295690068 -0.0801155658433268 RFS(ph)EDSSTSK ddPTM_A549_MK2206_60min_R1 2 RFSEDSSTSK 10 1 Q14207 Q14207 NPAT Protein NPAT 1 RFS(0.998)EDS(0.002)STSK;RFS(0.998)EDS(0.002)STSK 91.85799999999999 0.00050814 9729600.0 4466.9 5033.1 3731.5 3111.7 4606.6 3465.3 2583.0 2759.3 5031.4 4599.299999999999 5292.4 True False 5220.803514780222 5289.263291891749 4260.682810144982 3874.06663968952 3928.975242326119 3831.9957459200286 3052.2976651064405 3150.439225001847 3891.7959334947955 3560.3149356474228 3978.1510171907175 1.3123693626058064 1.329578306362766 1.071020881744651 0.9738359913810664 0.9876385349243666 0.9632605020173667 0.7672654084564908 0.7919355528203696 0.9782926582417919 0.894967265008868 1.0 11.957882328962627 -5.88935501138711 2.4998794770600092 0.9566139382383637 1.3339771102596245 0.7760036545266382 0.08096757729521667 0.11521287159822396 1.4143317891028793 0.01273321883643047 0.05373203067031438 1.2901642055471e-06 5.88935501138711 0.3773631720212608 RFS(ph)EGVLQS(ph)PSQDQEK ddPTM_A549_MK2206_60min_R1 1 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 RFS(0.998)EGVLQS(0.877)PS(0.125)QDQEK 47.808 0.0063617 1148700.0 699.4 872.15 568.4 681.18 852.19 868.79 617.01 724.39 1240.6 1259.9 1359.7 True False 817.4416213117128 916.5387097461582 649.007666966745 848.0691305793325 726.8339798892667 960.7247811438718 729.1127302931961 827.0745008513348 959.6060808311088 975.2877149614476 1022.0489641890673 0.7998067117658126 0.8967659494409596 0.6350064328685979 0.8297734847294943 0.7111537757547307 0.9399987816690833 0.7133833660031171 0.8092317783498438 0.9389042154086003 0.95424754501393 1.0 9.997248599039976 -8.822246789202365 2.7528812459375076 0.9751536006411876 0.7894922881830653 0.47481728809549106 0.08145426010076114 0.1463407313548819 2.1562119518782947 0.013867428990771891 0.01476457670734479 1.5057511751973292e-09 8.822246789202365 -0.18566131245812234 RFS(ph)EGVLQS(ph)PSQDQEK ddPTM_A549_PD325901_60min_R1 2 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 RFS(1)EGVLQS(0.992)PS(0.008)QDQEK;RFS(1)EGVLQS(0.985)PS(0.015)QDQEK 101.05 3.1033e-07 13016400.0 4251.700000000001 4577.4 4146.2 4493.200000000001 4849.8 4072.3999999999996 4628.4 4645.5 4588.5 4483.9 5292.200000000001 True False 4683.329454063891 4963.153562386695 4427.586065126036 4770.7347592024125 4509.1667789017165 4039.2357245999165 4804.536294757663 4552.841858175748 4395.661301938575 4200.785788772839 4641.292950019864 1.0090570676095434 1.0693471874826288 0.9539553121952983 1.0278891702326167 0.9715324646513462 0.8702824338167727 1.035171954560011 0.9809425750977995 0.9470768919940212 0.9050895588814017 1.0 12.18031104534678 -5.7667685303959 24.999975920078896 0.9742087386927654 1.0392021314004058 0.24038195135931173 0.048484047164732626 119.1475610005069 558954.8895143114 0.0058846736925075 0.0191042605608786 1.710926959341091e-06 5.7667685303959 0.06499339270764048 RFS(ph)EGVLQSPSQDQEK ddPTM_A549_MK2206_60min_R1 2 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK 179.06 4.2573e-29 83237000.0 8726.4 10602.0 9817.400000000001 8891.9 12051.9 8157.1 7642.9 8644.400000000001 14974.3 13868.8 13221.1 True False 10199.20298000361 11141.596515196657 11209.654943137442 11070.415899172564 10279.081475055387 9020.27890775524 9031.515998699972 9869.770172364722 11582.644959043419 10735.828447700073 9937.935986202901 1.0262898648334455 1.1211177583217309 1.1279661047022342 1.11395524327606 1.0343275997476848 0.9076612005026327 0.90879192734172 0.9931408479655317 1.165498044576249 1.0802875428665375 1.0 13.27873053366572 -6.762940114489688 24.980084260990616 1.0446216044904655 1.1012193443956544 0.14571730850328712 0.07670860905538268 91.89808525066266 1529702.6551091569 0.014171065513307459 0.027842962620258958 1.726075886745465e-07 6.762940114489688 0.056597739905188904 RFS(ph)EGVLQSPSQDQEK ddPTM_A549_PD325901_60min_R1 3 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK 200.14 9.7311e-40 160120300.0 14228.8 16149.5 14626.800000000001 16377.099999999999 20786.6 18262.600000000002 18329.6 19614.6 19960.9 16712.2 16948.9 True False 15673.297301311071 17510.47504167518 15619.46260609364 17388.67627190728 19326.620925877014 18113.875440545726 19027.14295834199 19223.371415643982 19122.012788899563 15656.988839878115 14864.292747929334 1.0544260374241106 1.1780227514769899 1.0508042912616549 1.1698287006847066 1.300204540748789 1.2186167043211036 1.2800570656812824 1.2932583972635958 1.28643946356367 1.053328880518665 1.0 13.85956320012235 -5.259116436265954 22.669366479449565 1.1709540234209737 1.0544259082956726 0.1041965230001839 0.10301116155607205 138.07295845384303 1347070.4544321613 0.017532177236472598 0.15936748262714834 5.5066004222703975e-06 5.259116436265954 -0.11652811512530103 RFS(ph)FFK ddPTM_A549_MK2206_60min_R1 1 RFSFFK 6 1 O15020;A4QPE4 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 1 RFS(1)FFK 60.681999999999995 0.026563999999999997 1819800.0 660.13 890.51 663.33 634.49 619.08 739.31 459.99 895.04 979.62 747.03 673.23 True False 771.543805371033 935.8331553242581 757.4001684184572 789.9400784833389 528.0141520903169 817.5432934857402 543.5642287929973 1021.914660945041 757.737634131687 578.2754041651326 506.048410797239 1.5246442611202498 1.8492957103647998 1.4966950834313133 1.5609970540937994 1.0434064030721342 1.6155436437351236 1.074134840057407 2.0194009884056263 1.4973619479170612 1.1427274383771027 1.0 8.983131595793717 -10.466459819475459 0.8300929869153242 1.0028861379773537 1.5168702573301631 0.28006650024737045 0.27260452223232695 0.5445410086250272 0.6846866779181034 0.1659379971719455 0.04993277211529817 3.416175553648689e-11 10.466459819475459 0.5139841193528094 RFS(ph)FFK ddPTM_A549_PD325901_60min_R1 2 RFSFFK 6 1 O15020;A4QPE4 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 1 RFS(1)FFK;RFS(1)FFK 101.28 0.013550999999999999 9617400.0 2450.5 2932.7 2689.4 2277.8999999999996 3040.2 2076.29 2246.7 2508.6 1851.21 2743.7 2625.6 True False 2699.2729560372454 3179.848921311544 2871.918856675982 2418.600709513747 2826.666840120623 2059.381382631756 2332.1993979414146 2458.564005041371 1773.4100814561853 2570.462313757228 2302.667845049723 1.1722372212041543 1.3809412104952894 1.2472136886134209 1.0503471938921876 1.2275616937967817 0.8943458289301324 1.0128249295508158 1.067702408893577 0.7701545341281695 1.1162974804565104 1.0 11.169090605102625 -6.999077813314295 0.7849052856038196 0.9018272600202608 1.2879777875438976 0.41609279870399507 0.12454561655077478 0.3453380877283935 0.39958155057686034 0.02139625153487975 0.06915233238677364 1.002125669354068e-07 6.999077813314295 0.38615052752363677 RFS(ph)FFKK ddPTM_A549_PD325901_60min_R1 1 RFSFFKK 7 2 O15020;A4QPE4 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 1 RFS(1)FFKK 47.823 0.012025 1369100.0 586.05 993.44 1121.9 983.06 1017.8 1031.7 996.84 1227.8 756.35 1056.8 1242.8 True False 645.5453645727927 1077.1606752779837 1198.0388805327523 1043.781383508752 946.3132392193835 1023.2981772590451 1034.7752916917789 1203.3105658095326 724.5632397779751 990.0734676453834 1089.9434787583018 0.5922741657285003 0.9882720492122393 1.0991752360384743 0.9576472577255666 0.8682223047909361 0.9388543508924141 0.9493843597015028 1.1040118953511078 0.664771388515871 0.908371385251377 1.0 10.090037607710753 -8.75588536537911 24.997588220397425 0.8416976038215949 0.9431693190071534 0.05001198204542456 0.14834289559090522 294.290036191932 1324543.323281804 0.028634468357620547 0.032022974125132546 1.754343510173711e-09 8.75588536537911 0.10147171518555853 RFS(ph)FKK ddPTM_A549_MK2206_60min_R1 5 RFSFKK 6 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 RFS(1)FKK;RFS(1)FKK;RFS(1)FKK;RFS(1)FKK;RFS(1)FKK 84.476 0.008316 4177663100.0 30705.7 36694.600000000006 31053.5 32418.4 40318.7 31642.7 26756.700000000004 32063.8 47898.0 49216.0 43967.299999999996 True False 35888.07147771099 38562.19840469113 35457.35324797998 40360.9094553173 34387.87263985891 34991.109511275696 31618.04604566532 36608.941841269225 37049.17947738871 38098.07141800352 33049.00597425167 1.0859047169428098 1.1668187065818187 1.0728720033396661 1.2212442784742845 1.0405115562825202 1.0587643555312105 0.9567018769126914 1.107716881705643 1.1210376344224562 1.1527751075988657 1.0 15.012319259524958 -6.815515425451924 24.999601979219957 1.0537104218906954 1.134301733732946 0.23217953820709714 0.06359743991232503 91.92229220931581 42495.72776747953 0.009017675506021092 0.017041814892269355 1.529271428155904e-07 6.815515425451924 0.08059131184225055 RFS(ph)FKK ddPTM_A549_PD325901_60min_R1 5 RFSFKK 6 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 RFS(1)FKK;RFS(1)FKK;RFS(1)FKK;RFS(1)FKK;RFS(1)FKK 90.37 0.0077228999999999996 4120871100.0 16760.99 21391.6 19413.62 22037.199999999997 24352.1 19452.72 17406.27 19585.67 26527.7 26454.269999999997 24457.780000000002 True False 18462.55336601131 23194.345205826718 20731.1449967807 23398.387793887527 22641.69250618427 19294.303497848756 18068.67512992643 19195.018447189108 25412.83302156171 24783.942877486043 21449.628110641475 0.8607400217280116 1.0813402025520276 0.9665037029940707 1.0908528424452844 1.0555750612268842 0.8995169239450156 0.8423770816316528 0.8948881700035712 1.1847680011269766 1.1554486049662729 1.0 14.388665014333275 -8.753999501633114 24.999631165341835 1.0872515574347204 0.967051599836253 0.3368645448855525 0.09274250268969096 195.49206990906163 656895.7164777964 0.01796073835932402 0.020173005518554398 1.761978068336972e-09 8.753999501633114 -0.12019995759846736 RFS(ph)FKKS(ph)FK ddPTM_A549_PD325901_60min_R1 1 RFSFKKSFK 9 3 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 RFS(1)FKKS(1)FK 40.113 0.034256 23813000.0 6239.8 8860.0 8097.9 6273.7 8551.4 5645.4 4725.3 7085.2 5451.3 8827.7 8540.6 True False 6873.259902502023 9606.66329417271 8647.472190628554 6661.212200393518 7950.7791647284685 5599.425734126407 4905.123877283377 6943.880127768121 5222.200818406395 8270.317515455288 7490.160343324066 0.9176385534427333 1.2825711138126794 1.154510957610673 0.8893283848496802 1.0614965234776248 0.7475708766524793 0.6548756838904368 0.9270669531069731 0.6972081476280959 1.1041576062956477 1.0 12.87078088773095 -6.648741591390843 1.5099975456611185 0.8401013038583126 1.1269879277500285 0.2736066375189532 0.16013875758016008 0.3271336776629851 1.4842307407069648 0.02365396172901421 0.06595862968081172 2.2452174483395246e-07 6.648741591390843 0.28688662389171593 RFS(ph)FSQR ddPTM_A549_MK2206_60min_R1 6 RFSFSQR 7 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RFS(0.999)FS(0.001)QR;RFS(0.935)FS(0.065)QR;RFS(1)FSQR;RFS(0.989)FS(0.011)QR;RFS(0.996)FS(0.004)QR;RFS(0.999)FS(0.001)QR 112.11 0.0033130000000000004 955068500.0 9878.46 10761.44 10284.75 9103.310000000001 13735.47 11680.839999999998 10410.019999999999 11471.699999999999 16360.369999999999 14824.960000000001 16157.3 True False 11545.70254284086 11309.151330173365 11743.282200626723 11333.62135866312 11715.000558267082 12916.89873568594 12301.38588451853 13097.848605607825 12654.772317142386 11475.991239618123 12144.996491205426 0.9506550743922788 0.9311778178250342 0.9669234741344227 0.9331926416668915 0.9645948079730021 1.0635572225187115 1.012876857842351 1.0784563515594583 1.041974143533603 0.9449151548070227 1.0 13.568074452716207 -7.103172416952113 5.485483067545937 1.0272153157229176 0.9462880638858688 0.5443647078210715 0.0340590674681423 0.10065788187552492 4.4110364215972035 0.0038962454853576347 0.006839388809940589 7.885469986002616e-08 7.103172416952113 -0.08092725183704874 RFS(ph)FSQR ddPTM_A549_PD325901_60min_R1 7 RFSFSQR 7 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RFS(1)FSQR;RFS(1)FSQR;RFS(1)FSQR;RFS(1)FSQR;RFS(0.986)FS(0.014)QR;RFS(0.999)FS(0.001)QR;RFS(1)FSQR 140.83 0.0022434 1027931400.0 7057.38 7685.040000000001 6988.99 7286.78 8645.33 7414.09 7684.19 7538.200000000001 8105.97 8214.86 8464.86 True False 7773.840022231442 8332.685291450223 7463.304889611015 7736.867851121909 8038.111845569374 7353.7121091737035 7976.616055400107 7387.844687396502 7765.304270169995 7696.172337643219 7423.73588316865 1.0471601016755676 1.1224382740154286 1.0053300665682459 1.042179836793925 1.0827583270834915 0.9905675828050798 1.074474655474337 0.9951653458128109 1.0460103096846105 1.0366980262716845 1.0 12.857929668777771 RFS(ph)GTAVYENPQR ddPTM_A549_MK2206_60min_R1 2 RFSGTAVYENPQR 13 1 Q6AHZ1-2;Q6AHZ1 Q6AHZ1-2 ZNF518A Zinc finger protein 518A 1 RFS(0.997)GT(0.003)AVYENPQR;RFS(0.978)GT(0.022)AVYENPQR 101.96 5.7558e-05 19028300.0 3692.3 3941.1000000000004 3320.5 3293.1000000000004 4361.8 3439.5 3796.0 3931.5 5296.5 4899.799999999999 5118.7 True False 4315.469971931993 4141.685156200867 3791.396829984301 4099.909647832878 3720.1849980415213 3803.4656070446795 4485.684063780123 4488.8021647137875 4096.851206772504 3792.9317769411077 3847.585521066837 1.121604691644495 1.076437452403263 0.985396376305378 1.0655798618080043 0.966888189404042 0.9885330907446798 1.1658438881265876 1.166654292708004 1.0647849630218362 0.9857953140153789 1.0 11.9097376786484 -10.45120182559758 1.1153662544300014 1.004604386649943 1.0639954121123927 0.15445933899124364 0.06482495393652464 0.818850946807882 1.9855786501636468 0.030888198543929584 0.012165907175341197 3.5383286944194863e-11 10.45120182559758 0.059391025462449676 RFS(ph)ISFAR ddPTM_A549_MK2206_60min_R1 2 RFSISFAR 8 1 A0A087WZV0;O43314;K7ENU7 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 RFS(1)ISFAR;RFS(1)ISFAR 124.67 0.00046553 13429800.0 1129.26 1279.15 1410.16 1124.16 1601.01 1296.81 1081.76 1487.5 1954.0 1639.5900000000001 1615.47 True False 1319.85148024373 1344.253271308603 1610.1418924170039 1399.57925046546 1365.5035498451227 1434.0375734471913 1278.3017894717552 1698.3576802776956 1511.4221198968128 1269.2054802552914 1214.304214296178 1.086919953587354 1.1070152400712407 1.325979003828342 1.1525771169926056 1.1245152028370264 1.180954127115809 1.0527030824912937 1.3986261929116992 1.2446816062257076 1.0452121184401346 1.0 10.245914183583091 -10.834192947765315 1.1369293503024134 1.0023029150571 1.1903966123404655 0.28286888296656665 0.09944835943109903 0.4473508796001634 1.0462455693594028 0.06433238765460363 0.016649336874666344 1.4648968739584226e-11 10.834192947765315 0.18809369728336556 RFS(ph)ITR ddPTM_A549_MK2206_60min_R1 1 RFSITR 6 1 O14924-5;O14924-4;O14924;E9PBG5;O14924-6 O14924-5 RGS12 Regulator of G-protein signaling 12 1 RFS(0.999)IT(0.001)R 64.265 0.024612000000000002 3752700.0 385.23 399.54 447.02 346.47 414.55 434.34 298.5 458.39 458.25 544.08 530.34 True False 450.24740603075657 419.87487942668133 510.4141577893638 431.3551655536292 353.5702441510644 480.3015705084422 352.7335861534159 523.3681862604994 354.45710667487975 421.171950120029 398.6419413606163 1.1294531741793254 1.0532631814745692 1.2803824806974764 1.0820616718887093 0.8869368911466857 1.20484455014721 0.8848381205186057 1.3128778785146802 0.8891616006711989 1.056516905076558 1.0 8.63894969475798 RFS(ph)ITR ddPTM_A549_PD325901_60min_R1 2 RFSITR 6 1 O14924-5;O14924-4;O14924;E9PBG5;O14924-6 O14924-5 RGS12 Regulator of G-protein signaling 12 1 RFS(1)ITR;RFS(0.999)IT(0.001)R 73.26 0.019714 8941300.0 819.51 908.03 807.95 873.11 1004.3000000000001 962.14 1140.13 890.22 1070.63 1140.83 1234.73 True False 902.706051908624 984.5528748315621 862.782345598037 927.0400217233192 933.7614326469115 954.3046508365 1183.5182710530748 872.4638637359201 1025.6351443161157 1068.7977991047346 1082.8660375983568 0.8336267096442491 0.909210226054518 0.7967581544172959 0.8560985288442164 0.8623055855716575 0.881276739413688 1.0929498478666395 0.8056987969360653 0.9471486857144664 0.9870083297424088 1.0 10.080639061452612 -7.54295949501628 24.982993600402605 0.9679249595625731 0.8539823189557105 0.39986705289670665 0.06781392991740053 175.91211709837492 218856.1284681303 0.009945133055592952 0.014751850507635752 2.8644451132784428e-08 7.54295949501628 -0.11394264060686254 RFS(ph)LAPPKEER ddPTM_A549_MK2206_60min_R1 2 RFSLAPPKEER 11 2 Q9P219;A0A0A0MR69;Q9P219-3;Q9P219-2 Q9P219 CCDC88C Protein Daple 1 RFS(1)LAPPKEER;RFS(1)LAPPKEER 104.17 4.0826e-05 5945200.0 577.8299999999999 972.5 843.02 703.16 1005.1600000000001 814.1500000000001 890.8299999999999 821.3499999999999 1003.0600000000001 1528.33 1106.73 True False 675.3535774128495 1021.9960961166531 962.5729123967368 875.4342315660516 857.3022955274 900.302812610969 1052.6822799097058 937.7788777788813 775.8685115576756 1183.0791915287166 831.8983968058882 0.8118221888705404 1.228510717222985 1.157079898329627 1.0523331153507702 1.030537261303846 1.0822268874032246 1.2653976542706746 1.127275736291266 0.9326481629687688 1.4221438532291961 1.0 9.700263526584267 -8.75859406611156 24.999727696025985 0.9681949627058384 1.102721204385945 0.0 0.1776055140413591 78.44220794994072 689213.8922143148 0.018521997310566328 0.020554105942167847 1.7434356967184047e-09 8.75859406611156 0.13452624168010652 RFS(ph)LAPPKEER ddPTM_A549_PD325901_60min_R1 2 RFSLAPPKEER 11 2 Q9P219;A0A0A0MR69;Q9P219-3;Q9P219-2 Q9P219 CCDC88C Protein Daple 1 RFS(1)LAPPKEER;RFS(1)LAPPKEER 88.075 6.2812e-05 7866300.0 789.95 1098.02 1314.42 1183.42 1335.48 1147.74 1287.24 1478.0 1407.81 1230.38 1367.6599999999999 True False 870.145142469546 1190.5539989015258 1403.6244454495595 1256.5171656581763 1241.680491955888 1138.3931859719842 1336.2266226047554 1448.5201305314301 1348.64464149115 1152.6935968220355 1199.446490311054 0.725455574299017 0.9925861708034828 1.1702268144413477 1.047580843170688 1.0352112428407552 0.9490987677797641 1.114036043623947 1.2076571503875788 1.124389168158226 0.9610212761747345 1.0 10.22815308223938 -5.304474871192369 3.403034960397736 1.0696831838476313 0.6963741671987399 0.6105773484544248 0.07845894958243518 0.133663064345351 2.598104415389436 0.010852065327696956 0.12031206882504085 4.960496286012513e-06 5.304474871192369 -0.3733090166488914 RFS(ph)LDER ddPTM_A549_MK2206_60min_R1 4 RFSLDER 7 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 RFS(1)LDER;RFS(1)LDER;RFS(1)LDER;RFS(1)LDER 90.15 0.0068812 36951900.0 3311.48 3582.94 3057.0999999999995 2629.24 4496.71 2818.84 3083.0199999999995 3284.34 4977.99 4398.860000000001 4039.32 True False 3870.3768660870896 3765.2963420259143 3490.6427492681837 3273.4039180310688 3835.2499157557177 3117.1277778054446 3643.164826742726 3749.905252869411 3850.4832132165475 3405.154470859047 3036.2453644393495 1.2747246686374982 1.2401159623412668 1.1496576627669022 1.0781091529588918 1.2631554618985499 1.0266389582058795 1.1998914413873285 1.2350468433113082 1.2681726115792848 1.1215017438117414 1.0 11.568072666903065 -10.924154621907254 1.1766889210396458 0.9998678933817269 1.1949390028642881 0.23169531249337805 0.08356163464156716 0.34986992160474045 0.8597550522492021 0.055179995011701635 0.012988100644806504 1.1908179655081175e-11 10.924154621907254 0.19507110948256123 RFS(ph)LDER ddPTM_A549_PD325901_60min_R1 2 RFSLDER 7 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 RFS(1)LDER;RFS(1)LDER 143.39 0.0019824 32765000.0 2936.7 3019.0 2876.7 2897.3 3246.1 3315.6 2793.3 2837.7 3029.7 3251.2 3195.9 True False 3234.831622115721 3273.4217251814216 3071.93016100238 3076.2596407542856 3018.10513443706 3288.598852883675 2899.6005600524118 2781.099847367414 2902.372245065553 3045.9186771467375 2802.8245604792846 1.1541327515563669 1.1679010421621483 1.0960122885740227 1.0975569731086712 1.076808437100666 1.1733159824749513 1.0345280260982794 0.9922489928844652 1.0355169160388853 1.086731834769524 1.0 11.452665728052196 -7.109704057961082 0.3522516948277799 1.0016664322540623 1.1809536313281987 0.4616517926071336 0.04456866516910389 0.9298272533452946 0.192451574687701 0.015287954741723802 0.061686232731096954 7.767762563079197e-08 7.109704057961082 0.17928719907413648 RFS(ph)LDTDYR ddPTM_A549_MK2206_60min_R1 2 RFSLDTDYR 9 1 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 RFS(0.999)LDT(0.001)DYR;RFS(1)LDTDYR 118.9 6.6734e-05 4560700.0 612.6500000000001 570.41 601.5699999999999 578.3199999999999 954.97 978.28 525.97 619.5 944.5999999999999 772.0 994.79 True False 716.050342145583 599.4414325819025 686.8816717402968 720.008425961771 814.4951780411096 1081.800940270292 621.5319407340439 707.3160221391819 730.6496082162382 597.6046638227141 747.7561881927207 0.9575986845073543 0.8016535898294797 0.9185904210307456 0.9628919657649182 1.089252340404822 1.4467295053551295 0.8311959841298635 0.945917978758183 0.9771227838076098 0.7991972159629821 1.0 9.546424134454703 -6.3012651659082035 3.0194138560100785 1.01433954061823 0.8791546902200897 0.09260819690866295 0.16305943749808827 0.42715622540934806 7.768394560268381 0.02131550795898324 0.057732012401396166 4.997293235428659e-07 6.3012651659082035 -0.13518485039814032 RFS(ph)LDTDYR ddPTM_A549_PD325901_60min_R1 2 RFSLDTDYR 9 1 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 RFS(1)LDTDYR;RFS(1)LDTDYR 81.625 0.00066005 8715200.0 572.56 580.1700000000001 547.3 455.93 533.5999999999999 693.05 694.8299999999999 478.55 580.11 730.45 760.0 True False 630.6858697036056 629.0629620067918 584.4430691822582 484.09176060784233 496.12177682006603 687.4060305799948 721.272135875565 469.00494483478764 555.7299940868663 684.3292623406228 666.5248180369397 0.9462301367278603 0.9437952571061328 0.8768511739796426 0.7262921762367344 0.7443410408651435 1.0313284846685151 1.0821384535985743 0.7036571364530867 0.8337723953379738 1.0267123501209168 1.0 9.380514784807222 -7.258535106440317 24.89743810233286 0.9217723095072392 0.8477482283506667 0.1289504446391918 0.11885261358070974 554.2003065485983 4750987.40024171 0.01884336880680754 0.03172724415487896 5.5139762804073964e-08 7.258535106440317 -0.07402408115657255 RFS(ph)LFGK ddPTM_A549_MK2206_60min_R1 4 RFSLFGK 7 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RFS(1)LFGK;RFS(1)LFGK;RFS(1)LFGK;RFS(1)LFGK 82.645 0.0074355 217126000.0 13404.170000000002 15094.300000000001 12599.8 10841.199999999999 16320.1 13596.300000000001 11590.939999999999 13458.7 17332.8 17550.0 17530.1 True False 15666.46619550732 15862.535397031977 14386.641101772675 13497.294486679952 13919.434909105736 15035.0514415065 13696.86376244246 15366.511940540116 13406.948474794013 13585.442810995652 13176.892363852885 1.188934823394618 1.2038145989980462 1.0918083493827724 1.0243154542042099 1.0563518714996722 1.1410164875256137 1.0394608519392607 1.1661711666321142 1.0174590567023392 1.0310050682559653 1.0 13.685722545047497 -2.0000000000000004 0.15618815412110265 0.979651911250459 1.7606641463746397 0.41413996628182703 0.05457054097710387 35.56762464301926 0.34206089770341275 0.08767349012567921 6.412127983379224 0.00999999999999999 2.0000000000000004 0.7810122351241807 RFS(ph)LFGK ddPTM_A549_PD325901_60min_R1 4 RFSLFGK 7 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RFS(1)LFGK;RFS(1)LFGK;RFS(1)LFGK;RFS(1)LFGK 114.89 0.0058871 428430000.0 22723.9 24141.899999999998 25990.5 24161.0 30462.0 26840.7 27185.7 27815.0 25636.8 28415.3 31659.6 True False 25030.81359954899 26176.42263900541 27754.371623572948 25653.370096387764 28322.45420819498 26622.118238205738 28220.26669008586 27260.208004554635 24559.37445037351 26621.153108614573 27765.66990673988 0.9015022394065476 0.9427621493350429 0.9995930844382692 0.9239240465853347 1.020052975610718 0.9588141877226396 1.016372620753358 0.9817954364550538 0.8845230290810283 0.9587794279061322 1.0 14.76101458403203 -5.337947711917511 3.885819467813973 0.9590127692233943 0.8997843283622978 0.16009803724074223 0.04011479985485565 0.4041760731622253 10.288810636181395 0.006835841611301493 0.056382140382745 4.592533025769934e-06 5.337947711917511 -0.059228440861096465 RFS(ph)LSVPR ddPTM_A549_MK2206_60min_R1 2 RFSLSVPR 8 1 Q07002;Q07002-3;D6R9B0;A0A0A0MSJ6;D6R9X1 Q07002 CDK18 Cyclin-dependent kinase 18 1 RFS(1)LSVPR;RFS(0.963)LS(0.037)VPR 98.943 0.001013 3454000.0 185.05 173.09 0.0 306.68 320.07000000000005 371.89 156.25 317.14700000000005 439.90000000000003 370.02 631.06 True False 216.28191596187082 181.89954167283437 0.0 381.8166137673884 272.98812699416527 411.24315295939704 184.63860246724025 362.10355847195325 340.2633523759512 286.43222500994915 474.3503856300307 0.45595391616390457 0.3834708417728721 0.0 0.8049252732455583 0.5754989038990309 0.8669607223217183 0.38924518259219676 0.7633672690937279 0.7173249198986409 0.6038410290939487 1.0 8.889809309800443 -7.406623952899866 0.15403964724042216 1.1647370922268518 1.7435471721473467e-14 0.25428549521234 0.23087030099947214 4.6983682367181245 0.30907702274991977 0.7028417902211085 1.4951824315813267 3.920812256358796e-08 7.406623952899866 -1.1647370922268343 RFS(ph)LSVPR ddPTM_A549_PD325901_60min_R1 2 RFSLSVPR 8 1 Q07002;Q07002-3;D6R9B0;A0A0A0MSJ6;D6R9X1 Q07002 CDK18 Cyclin-dependent kinase 18 1 RFS(1)LSVPR;RFS(0.999)LS(0.001)VPR 112.13 0.00061178 4685400.0 538.8 471.7 410.13 434.89 432.05 592.4200000000001 559.0 457.65 549.19 565.88 432.65 True False 593.498579356404 511.45181443129366 437.96388811204 461.7521675931487 401.7042984915843 587.5955279362249 580.2730508965374 448.5218117305204 526.1094541596701 530.1502402263147 379.4367927943187 1.5641566411777093 1.3479236176986567 1.1542472855273345 1.2169409407891836 1.058685678669375 1.5485992373300046 1.5293009584631556 1.1820725355267554 1.38655360827082 1.3972030395947745 1.0 8.567715768914947 -10.793284310059104 0.887521483857866 0.9863431336964228 1.327547324721713 0.0 0.19853948752721143 0.5963676316505089 0.7778338042296112 0.13912442759530494 0.029705571113036695 1.6095915741243577e-11 10.793284310059104 0.3412041910252903 RFS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 RFSPPR 6 1 H3BMM9;H3BTC0;Q15287;H3BV80;H3BPG5;Q15287-2;Q15287-3 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 RFS(1)PPR 59.597 0.052695000000000006 51440000.0 4489.5 4962.7 3614.4 3194.1 4762.6 3542.4 3461.1 3632.1 5521.4 5895.5 7537.2 True False 5247.217842263275 5215.280232594462 4126.976269325481 3976.6546433886 4062.027848978069 3917.2544167451897 4089.937068795938 4146.961297839745 4270.811715864006 4563.702455397428 5665.5052238625 0.9261694473711817 0.9205322432019409 0.7284392311462532 0.7019064472201627 0.7169753955691794 0.6914219053662036 0.7219015616770702 0.731966723880721 0.7538271605285625 0.8055243575057707 1.0 12.46798889939468 -10.578839832844976 0.830645853429226 1.0028351554822246 0.7616689870967203 0.13054291270940133 0.09568340875328923 0.41061059881441275 0.4979641579454162 0.06107571239015305 0.01614829949828023 2.6373038402041628e-11 10.578839832844976 -0.2411661683855043 RFS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 RFSPPR 6 1 H3BMM9;H3BTC0;Q15287;H3BV80;H3BPG5;Q15287-2;Q15287-3 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 RFS(1)PPR 57.047 0.059659000000000004 98101000.0 2975.4 2758.3 3316.4 2855.2 3591.8 3035.9 3318.2 3098.0 3842.8 3914.4 3498.7 True False 3277.4604176262906 2990.7516212546925 3541.4708471332747 3031.55921937032 3339.5243590373157 3011.1766369494367 3444.47591678871 3036.2079596660164 3681.3004796969735 3667.244115964316 3068.3820800866347 1.068139603244506 0.9746998721783207 1.1541818309124274 0.9879992583207646 1.0883665305928998 0.9813564798502594 1.1225707317034834 0.9895143044181415 1.1997529589251914 1.1951719245670906 1.0 11.583262425496757 RFS(ph)PPRR ddPTM_A549_MK2206_60min_R1 5 RFSPPRR 7 2 H3BMM9;H3BTC0;Q15287;H3BV80;H3BPG5;Q15287-2;Q15287-3 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 RFS(1)PPRR;RFS(1)PPRR;RFS(1)PPRR;RFS(1)PPRR;RFS(1)PPRR 60.074 0.0095397 3794325000.0 11879.0 13143.199999999999 10821.699999999999 10473.58 16696.899999999998 13057.8 12143.9 12150.4 17587.6 17517.5 18862.200000000004 True False 13883.884786333772 13812.132740853867 12356.379784683359 13039.60757017687 14240.808128249686 14439.567728933858 14350.289436812282 13872.75640903941 13604.03668162599 13560.284583567876 14178.1951697632 0.9792420417475222 0.9741813097840544 0.8715058324937511 0.9196944613927651 1.0044161444906625 1.0184348258745985 1.0121379530319976 0.978457147960893 0.959504120146288 0.9564182479647977 1.0 13.791386274231716 -6.759508276236798 24.999969873618134 0.9869315834452075 0.934254144477352 0.38499543583285956 0.03251137184417906 45.1837220234615 584930.7779142775 0.004931320043296491 0.009872668153721292 1.7397695433874398e-07 6.759508276236798 -0.05267743896785548 RFS(ph)PPRR ddPTM_A549_PD325901_60min_R1 4 RFSPPRR 7 2 H3BMM9;H3BTC0;Q15287;H3BV80;H3BPG5;Q15287-2;Q15287-3 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 RFS(1)PPRR;RFS(1)PPRR;RFS(1)PPRR;RFS(1)PPRR 65.404 0.0082241 5524665000.0 17733.6 17034.1 17411.399999999998 17944.6 19349.5 18808.6 18176.7 19802.199999999997 19280.800000000003 18213.5 20210.6 True False 19533.90201721368 18469.623388179156 18593.042307253734 19052.997186856483 17990.457872151157 18655.428997571453 18868.424265171885 19407.229586474627 18470.495026788125 17063.496501664646 17724.824325549183 1.1020646331065087 1.0420201097032253 1.0489831642761656 1.0749329210215541 1.0149865263386042 1.0525028996017107 1.0645196769580547 1.0949180217544028 1.0420692858526166 0.9626891746999559 1.0 14.113483708232014 -9.897151375807036 0.8638524781517221 1.0044604219561892 1.0590313407446892 0.5262059775917953 0.026911008388215377 0.3433489761335849 0.525985574283501 0.009135847823770594 0.004755827437703823 1.2672100955991327e-10 9.897151375807036 0.054570918788499956 RFS(ph)PSQVPIQTR ddPTM_A549_MK2206_60min_R1 1 RFSPSQVPIQTR 12 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 RFS(0.987)PS(0.013)QVPIQTR 53.981 0.0090194 47037000.0 487.37 488.27 527.36 601.94 568.74 591.61 401.63 323.98 981.95 716.81 456.64 True False 569.6261409475115 513.1208574302086 602.1475778528896 749.415327022114 485.079099405322 654.2137775210653 474.6009722170729 369.90515714713814 759.5398928519326 554.8821231538342 343.24368537713906 1.6595385879324618 1.4949171078454568 1.7542859592341222 2.183333179745736 1.413220752691608 1.9059746920099863 1.3826939647720105 1.0776750539218363 2.2128299083416145 1.616583630793258 1.0 8.423089369261785 -7.766380138076556 24.99189432051352 1.5293118397131027 1.7308894421985894 0.11783699516690094 0.3539455442406518 379.64658798859836 1920372.2016586326 0.07469754018767599 0.10495505507946609 1.71245773660036e-08 7.766380138076556 0.20157760248548673 RFS(ph)PSQVPIQTR ddPTM_A549_PD325901_60min_R1 3 RFSPSQVPIQTR 12 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 RFS(0.962)PS(0.038)QVPIQTR;RFS(0.996)PS(0.004)QVPIQTR;RFS(1)PSQVPIQTR 158.65 2.9475e-14 113500000.0 4393.9 4384.04 4746.5 4657.9 4512.5 5618.6 4732.3 4704.7 4798.0 5097.6 5062.4 True False 4839.965493381782 4753.498436589716 5068.626033023183 4945.607904141575 4195.557567279886 5572.843984440893 4912.390266113924 4610.861067734249 4596.356745494449 4775.73666603814 4439.75689319764 1.0901420077295945 1.0706663790246655 1.141644949251402 1.1139366463328144 0.9449971402056037 1.2552137692447325 1.1064547866664562 1.038539086407809 1.0352721682884805 1.0756752635161781 1.0 12.116264966061705 -8.391216781821818 3.4483406868551345 1.0172873344446847 1.1035164592968683 0.15193739755250169 0.07073618454166117 0.25715689406298514 5.66631725612644 0.011056743776040224 0.013450156890999003 4.062405001117067e-09 8.391216781821818 0.08622912485218359 RFS(ph)RLENR ddPTM_A549_MK2206_60min_R1 1 RFSRLENR 8 2 O43293 O43293 DAPK3 Death-associated protein kinase 3 1 RFS(1)RLENR 41.54 0.028888 5046000.0 1006.1 943.68 1070.4 1069.2 1104.2 977.51 813.61 907.82 1132.3 1218.1 1735.2 True False 1175.9050832166342 991.7092812168254 1222.1988154841729 1331.1540479982111 941.773642724895 1080.9494593813763 961.4324054615761 1036.5062650821499 875.8358579115461 942.9303639928094 1304.3019509162827 0.9015589391632446 0.7603371907250016 0.9370520488952487 1.0205873318391225 0.722051854682339 0.8287570670441767 0.7371241028859629 0.7946827529882906 0.6714977749563774 0.7229387055124721 1.0 10.349062182345657 -4.917188280059868 11.644438249833184 0.8362237764710855 1.50321402297825 0.022984942490573035 0.1133551297211158 630132.6505846492 2663437.392504412 0.01845838623293011 9859809.6480093 1.2100734156504659e-05 4.917188280059868 0.6669902465071645 RFS(ph)RS(ph)PIR ddPTM_A549_MK2206_60min_R1 1 RFSRSPIR 8 2 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2;H7C2G8 P18583-5 SON Protein SON 2 RFS(1)RS(1)PIR 45.158 0.043342 79156000.0 2781.0 2495.0 2157.2 1900.4 2952.9 2286.8 2064.7 2616.8 3255.4 3296.9 3939.5 True False 3250.3648110778845 2621.984842993368 2463.1233975732953 2365.9980853121965 2518.5323216829756 2528.787658145013 2439.8292640903087 2987.7394136139 2518.0570978055716 2552.1280002035082 2961.213425331199 1.0976462497681487 0.8854427109387127 0.8317952959766166 0.7989961362030398 0.8505068564591182 0.8539700774395143 0.8239288810523424 1.0089578103542924 0.8503463736403728 0.8618520969720593 1.0 11.531972759159535 -10.936638788348501 0.8400050398540436 1.0118544910366563 0.8808042866846069 0.0 0.09370396447861974 1.0060793525329972 1.0587987981210805 0.09210080954220044 0.015007099540956855 1.1570742045048678e-11 10.936638788348501 -0.1310502043520494 RFS(ph)RSPIR ddPTM_A549_PD325901_60min_R1 1 RFSRSPIR 8 2 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2;H7C2G8 P18583-5 SON Protein SON 1 RFS(0.883)RS(0.117)PIR 42.001000000000005 0.027399 7039300.0 1408.1 1341.8 1507.6 1622.1 1772.5 1085.4 1683.4 1359.7 1563.9 1785.9 1866.2 True False 1551.0492754115667 1454.878195047509 1609.914801935269 1722.293432943611 1648.0057147930404 1076.560862263223 1747.4627081918259 1332.579716835985 1498.1747216087474 1673.1379692163985 1636.6692308164968 0.947686463585427 0.8889262214098713 0.9836531240537341 1.0523161311491132 1.006926557769335 0.6577754637240608 1.0676944829714046 0.8142022173724079 0.9153802695131883 1.0222822899784756 1.0 10.67654706873549 -4.169769201605549 15.834213534086386 0.9442041137080128 0.9378373378420857 0.0 0.11460534743725362 0.0 0.0 0.01368387667586452 0.0 6.764423636439224e-05 4.169769201605549 -0.0063667758659271545 RFS(ph)YSQSK ddPTM_A549_PD325901_60min_R1 2 RFSYSQSK 8 1 Q8WXF0 Q8WXF0 SRSF12 Serine/arginine-rich splicing factor 12 1 RFS(1)YSQSK;RFS(0.992)Y(0.003)S(0.006)QSK 78.513 0.0017847000000000002 11316800.0 4427.9 4688.0 4439.9 4491.5 5076.0 4524.6 4523.799999999999 3943.8 5104.4 5227.0 5776.4 True False 4877.417148352303 5083.074212537433 4741.218313287608 4768.929754063394 4719.479271249352 4487.753157726348 4695.955684518342 3865.137815148751 4889.879819029151 4896.966327954602 5065.939419616553 0.9627863154987117 1.0033823525118617 0.9359011074882685 0.9413712559603329 0.9316098911436598 0.8858679083979317 0.9269664114684152 0.762965660462104 0.965246406242906 0.966645260105629 1.0 12.306614109533001 -8.984886681063621 24.97006043263 0.9846676262964399 0.918933256333474 0.175353720886545 0.05724781588519185 99.31244781692233 164086.0834907638 0.010514265861318628 0.010598788020136257 1.0354122979360036e-09 8.984886681063621 -0.06573436996296589 RFSEGVLQS(ph)PSQDQEK ddPTM_A549_MK2206_60min_R1 1 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RFS(0.001)EGVLQS(0.995)PS(0.003)QDQEK 80.752 0.00011459 17419000.0 3345.1 3538.6 3148.0 2668.5 3918.9 3358.6 2686.9 2521.9 4910.7 4561.2 4533.5 True False 3909.6711001570065 3718.699625417367 3594.433736121241 3322.2826197935165 3342.435001335439 3714.004822741755 3175.0749502030585 2879.387047994838 3798.434290776502 3530.821752109023 3407.7068317651965 1.1473026563531559 1.0912616046524974 1.0547954720210835 0.9749320536686454 0.9808458198864641 1.089883903193015 0.9317335988549126 0.8449632524589306 1.1146599394552108 1.036128377945016 1.0 11.734585509148529 -5.607387452469998 2.0885963457092975 1.0246023407586704 1.1462817266436354 0.25323783646598796 0.07313848554099135 0.5282715676430745 3.9133476075281606 0.011661834900888424 0.09243312398734543 2.4695199987499936e-06 5.607387452469998 0.12167938588496496 RFSFKK ddPTM_A549_MK2206_60min_R1 2 RFSFKK 6 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 0 ; 58.577 0.022997 22126000.0 1902.74 1869.75 2055.07 1577.58 2011.7600000000002 1569.1399999999999 1642.45 1741.79 2585.5 2142.71 2475.8999999999996 False True 2223.875994473332 1964.9122886520433 2346.5098278559976 1964.087170820257 1715.8327689623572 1735.1853532891666 1940.8619047828388 1988.6940665081602 1999.888378195093 1658.6703228232743 1861.065698636252 1.1949476023887493 1.055799529319082 1.2608420162573888 1.0553561716061377 0.921962491823734 0.9323611490774734 1.0428766196728356 1.068578109824619 1.0745931106357864 0.891247592193393 1.0 10.861913270431906 -6.501825715619215 24.221745176406934 1.0233545500819297 1.1588971321596135 0.4853466799288698 0.07623588691434707 360.48346822622517 414739.58577542566 0.009462866260187636 0.021767418506462542 3.149011773532448e-07 6.501825715619215 0.13554258207768388 RFSFKK ddPTM_A549_PD325901_60min_R1 2 RFSFKK 6 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 0 ; 58.577 0.022997 14147200.0 3926.6000000000004 3641.0 3737.0 3041.0 4094.7 3338.4 3806.3 4004.7 3877.7000000000003 4395.0 4120.200000000001 False True 4325.2255413898565 3947.839848090613 3990.6152924065395 3228.835663387906 3807.1023979481306 3311.2131772429934 3951.1508293872826 3924.823116873624 3714.733754064993 4117.498949944607 3613.4415200997387 1.1969822999295339 1.0925428919025773 1.104380760061779 0.8935624515929024 1.053594579231781 0.9163599739540262 1.093459187704862 1.086173138555537 1.0280320667711977 1.1394951120811152 1.0 11.819157830586912 -5.605671493302671 1.7146427255241379 1.0146375714896438 1.195582397619969 0.2898938162170056 0.07303754761537286 0.3479178255974816 1.5674415788249163 0.00832070188726379 0.08266849917795448 2.4792967248314993e-06 5.605671493302671 0.18094482613032525 RFT(ph)DEESR ddPTM_A549_MK2206_60min_R1 2 RFTDEESR 8 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 RFT(0.957)DEES(0.043)R;RFT(0.999)DEES(0.001)R 69.01 0.022368 5445000.0 1236.21 1441.83 1295.76 1490.4299999999998 1442.53 1169.38 1114.73 1359.96 1859.55 1787.21 2413.2 True False 1444.8520255672747 1515.2129884461433 1479.5182521970962 1855.5854169079444 1230.3357479079357 1293.123015428379 1317.2620117011634 1552.7384947028268 1438.3648940911562 1383.4780197287473 1813.9358390682196 0.7965287384748209 0.835317851829024 0.8156397929471935 1.0229608881100885 0.678268614252604 0.712882444669393 0.7261899695293594 0.8560051911761309 0.7929524645314984 0.7626940214376109 1.0 10.824907711699892 -10.645566468577268 0.7751960026419907 1.0086912530504608 0.803368349762346 0.0 0.11078768496346096 0.5908052374084846 0.5904637742384554 0.07432555282771028 0.01690464190522357 2.261692362269163e-11 10.645566468577268 -0.20532290328811487 RFT(ph)DEESR ddPTM_A549_PD325901_60min_R1 3 RFTDEESR 8 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 RFT(1)DEESR;RFT(1)DEESR;RFT(1)DEESR 115.33 0.00080767 21726100.0 3423.6 2596.9399999999996 2972.36 3426.52 3648.04 3462.6 2922.7 3077.02 3219.85 3204.3 3284.04 True False 3771.1613516788893 2815.793247761722 3174.082223852689 3638.1683582084584 3391.8142554547844 3434.4017336213715 3033.9249478628067 3015.6464222245077 3084.5309018299918 3001.979951150742 2880.1238992447807 1.3093746948413416 0.9776639291455734 1.1020644718392112 1.263198558632304 1.1776626194255664 1.1924493021018756 1.0534008445464291 1.0470544072827086 1.0709716004366376 1.0423093089633797 1.0 11.491915160559254 -7.833032798078352 5.78602296283218 1.0363103758723775 1.1629552742618718 0.37496461441504625 0.08170322460159646 0.17265624491350456 10.272745231199538 0.01267901130928076 0.017680690697660657 1.4688153479820998e-08 7.833032798078352 0.12664489838949433 RFT(ph)IADSDQLPGYSVETNILPTK ddPTM_A549_PD325901_60min_R1 1 RFTIADSDQLPGYSVETNILPTK 23 1 A0A5H1ZRR2;Q6P9H4;G9CGD6-3;G9CGD6;G9CGD6-2 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 RFT(0.493)IADS(0.493)DQLPGY(0.007)S(0.007)VET(0.001)NILPTK 61.89 0.0005394 1612900.0 1098.3 1034.9 880.83 1139.1 1249.6 1132.3 1129.2 1102.2 849.74 987.99 1106.4 True False 1209.798607474274 1122.1146549818657 940.6084206610789 1209.4596199162 1161.8324068859706 1123.078924212868 1172.1723239219496 1080.2157563408266 814.0283828504485 925.6081427885716 970.3198140474608 1.2468039814913021 1.1564379483308997 0.9693797931813349 1.2464546249666115 1.1973705886100172 1.1574317126723492 1.208026783491629 1.1132574443007206 0.838927919502046 0.9539206861370944 1.0 9.922316522739406 -8.635890144282065 5.641148646863985 0.9243761382272846 1.1639578250283236 0.6318096476178883 0.07919080748205283 0.10332564355613026 4.777975674046484 0.015097125293723148 0.01711248176837323 2.3126497058833335e-09 8.635890144282065 0.23958168680103897 RFT(ph)RQEHLR ddPTM_A549_PD325901_60min_R1 1 RFTRQEHLR 9 2 Q8NAP8;Q8NAP8-2 Q8NAP8 ZBTB8B Zinc finger and BTB domain-containing protein 8B 1 RFT(1)RQEHLR 48.79600000000001 0.010906 24273000.0 356.8 352.41 381.63 287.22 527.79 645.57 429.86 400.53 348.47 726.22 463.3 True False 393.0220733377228 382.1088274830028 407.5297067276177 304.9609270760519 490.71985117665366 640.312691958051 446.2185575284179 392.54111494029337 333.8250177370677 680.3663452625196 406.317037100677 0.9672793347337292 0.9404203924344037 1.0029845404356998 0.7505491998369954 1.207726495246773 1.5758942734153545 1.0982029223102798 0.9660956324679778 0.8215875468060985 1.6744716148684133 1.0 8.666462048622185 -8.399445357858847 4.557274297200287 0.9149386567053797 1.0803434573384727 0.0 0.30188460469373485 0.4016358644923651 13.26690609021936 0.03575472819211818 0.04328602182633217 3.986159222881751e-09 8.399445357858847 0.16540480063309304 RFT(ph)VYK ddPTM_A549_MK2206_60min_R1 1 RFTVYK 6 1 E5RHX2;Q96BR1-2;Q96BR1;E5RK28 E5RHX2 SGK3 Serine/threonine-protein kinase Sgk3 1 RFT(1)VYK 73.665 0.028921 3542500.0 1382.8 1080.9 1369.0 1252.9 1861.2 1790.1 1581.5 1666.7 2121.5 1765.2 1702.4 True False 1616.1828337858678 1135.913193102817 1563.1447854987227 1559.8605562448192 1587.419945516731 1979.5271938277901 1868.8380787324195 1902.9598290546796 1640.9836373393491 1366.4400940153564 1279.6470961502305 1.262991053274057 0.8876769200822389 1.2215436507466662 1.218977139039037 1.240513849710927 1.5469321188498941 1.4604323991784514 1.487097368313234 1.2823720245028383 1.0678257295517173 1.0 10.321530280174573 -3.97657684284626 16.22869711857908 1.207711226243457 1.1747448397641223 0.0 0.19820871629345502 0.0 0.0 0.02929315043068596 0.0 0.00010554147445725235 3.97657684284626 -0.03296638647933481 RFT(ph)VYK ddPTM_A549_PD325901_60min_R1 2 RFTVYK 6 1 E5RHX2;Q96BR1-2;Q96BR1;E5RK28 E5RHX2 SGK3 Serine/threonine-protein kinase Sgk3 1 RFT(1)VYK;RFT(1)VYK 84.568 0.024965 7962600.0 2444.1 2109.2 1969.2399999999998 2567.8999999999996 2791.0 2501.0 2036.9 2231.7799999999997 2742.7 2929.7 2972.5 True False 2692.2232327486754 2286.9496862380447 2102.8844684021014 2726.5133508759614 2594.9697884272928 2480.6326852039083 2114.4153441344483 2187.265397102461 2627.4338569961687 2744.718242014268 2606.901344230006 1.0327292356910693 0.8772674467715752 0.8066605485691002 1.0458828282515173 0.9954230888602201 0.9515636986779055 0.8110837599644485 0.8390288347288831 1.0078762139624533 1.0528661731251547 1.0 11.348120271109293 -8.811263026482598 24.99794829370066 1.003719404256195 0.918893234932838 0.2297792270272172 0.0802188990020108 132.26180082203786 66358.90876419222 0.013952440178251068 0.014853512889832452 1.5443188536571058e-09 8.811263026482598 -0.08482616932335696 RFVS(ph)EGDGGR ddPTM_A549_MK2206_60min_R1 2 RFVSEGDGGR 10 1 Q53EL6;Q53EL6-2 Q53EL6 PDCD4 Programmed cell death protein 4 1 RFVS(1)EGDGGR;RFVS(1)EGDGGR 77.813 0.0011056 19997000.0 3516.9 4397.4 3641.3 3907.3 4945.700000000001 4148.299999999999 4528.4 4109.2 6060.4 6307.2 6567.1 True False 4110.466740050275 4621.208877185987 4157.691093817749 4864.588675405363 4218.1940815291755 4587.270352581317 5351.151663440962 4691.691683897215 4687.729076470138 4882.39913945936 4936.307827260443 0.8327006507476066 0.9361670784924833 0.8422673867413953 0.9854710941122804 0.8545241158248822 0.9292917931998508 1.0840392963116219 0.9504455248896044 0.9496427776611611 0.9890791478798434 1.0 12.269216648155654 -7.530307839549946 24.95297269530516 0.9817565465339098 0.8950556141329619 0.46021630776427047 0.05312295472113059 133.64227178910258 448878.75255795225 0.007668373232949998 0.011386752919001396 2.9491180718167006e-08 7.530307839549946 -0.0867009324009479 RFVS(ph)EGDGGR ddPTM_A549_PD325901_60min_R1 1 RFVSEGDGGR 10 1 Q53EL6;Q53EL6-2 Q53EL6 PDCD4 Programmed cell death protein 4 1 RFVS(1)EGDGGR 84.169 0.00074281 13420000.0 3621.7 4190.4 4160.7 3849.5 4021.1 4274.3 3841.7 4218.0 4734.4 4399.6 5643.6 True False 3989.372317845374 4543.539714210077 4443.070122321616 4087.274872151181 3738.6718080419164 4239.4915179396485 3987.8979957589045 4133.868681043015 4535.429632319493 4121.808505159568 4949.472977727996 0.8060196178051776 0.9179845479822665 0.8976854995097195 0.8258000176066022 0.7553676572971441 0.8565541295036513 0.8057217432449763 0.8352139105809654 0.9163459731426667 0.8327772519836326 1.0 12.27305919916805 -9.296316005452915 0.9905179008386219 0.9814658181009408 0.8380313070701239 0.06753339400185732 0.06304781167148522 0.21759323165523517 0.44977784820310895 0.01265719406641933 0.010160151348922687 5.054567429555373e-10 9.296316005452915 -0.14343451103081695 RGAASQARGS(ph)DS(ph)EDGEFEIQAEDDAR ddPTM_A549_PD325901_60min_R1 1 RGAASQARGSDSEDGEFEIQAEDDAR 26 2 Q8TDD1-2;Q8TDD1;H0YHZ9 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 2 RGAAS(0.123)QARGS(0.892)DS(0.985)EDGEFEIQAEDDAR 49.199 0.0081632 7751400.0 336.4 377.66 352.34 444.67 263.01 342.64 317.35 454.92 400.15 250.54 502.3 True False 370.55108035540894 409.4867335978855 376.2519111925396 472.1362559811573 244.5370849352428 339.8496534419298 329.4269279105832 445.84626372216417 383.33308705910866 234.72086164257618 440.52028434204607 0.8411668963413523 0.929552504510634 0.8541080276348757 1.0717696159810945 0.555109704654076 0.7714733362381342 0.7478133008168054 1.0120902023571352 0.8701826015381987 0.5328264554109045 1.0 8.783064641260742 -10.110667761235947 0.571038290522189 1.002473703994136 0.8415814801338694 0.0 0.18891606414381887 1.29166013332748 0.7904666961741679 0.09872169104699917 0.031176806019076936 7.750544939729799e-11 10.110667761235947 -0.1608922238602667 RGADDDRPSWR ddPTM_A549_MK2206_60min_R1 1 RGADDDRPSWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 54.023 0.006568600000000001 7859400.0 1011.9 816.56 610.15 442.97 1022.7 1026.2 707.29 772.78 1154.2 1336.4 1157.5 False True 1182.6839814202488 858.1194161902457 696.6784447567894 551.497669885679 872.2621847624977 1134.7918028635702 835.7954376899482 882.3239315394947 892.7755428786604 1034.5063118298906 870.0608046251717 1.3593118723808704 0.9862752253963786 0.8007238586697666 0.6338610668978107 1.002530145164135 1.304267238371284 0.960617273237604 1.0140945631030993 1.026107069911366 1.1890046147700712 1.0 9.764972417708345 -6.9825612427719195 24.999301070129924 1.0317675063299812 0.9227441999154552 0.0667015225986749 0.19030250270326782 554.9465008144173 795538.0293387447 0.026438422861280706 0.04995745084739567 1.0409713029412756e-07 6.9825612427719195 -0.10902330641452596 RGAEDDRGPWR ddPTM_A549_MK2206_60min_R1 2 RGAEDDRGPWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 58.676 0.0036366999999999997 4757000.0 679.08 790.0 547.46 584.96 900.7 713.04 454.95000000000005 447.13 983.0699999999999 886.8499999999999 1109.43 False True 793.6921020880156 830.2076256371786 625.0980600943248 728.2752262598523 768.2082231500754 788.4934195223547 537.6085260318142 510.512046778196 760.4062146402048 686.5099690559256 833.9279122896796 0.9517514528429798 0.9955388390319178 0.7495828486877483 0.873307171431951 0.9211926016972372 0.9455174816698755 0.6446702623920164 0.6121776705812679 0.9118368667531351 0.8232245964414417 1.0 9.703778867117146 -9.17718874625084 3.1806832649177434 0.9670356370862341 0.8376667017673481 0.019102170781300387 0.12723697038645754 0.2971676136128676 6.233007870652062 0.024522066577815034 0.02340526759898845 6.649840884446204e-10 9.17718874625084 -0.12936893531888594 RGAEEEEEEEDDDS(ph)GEEMK ddPTM_A549_MK2206_60min_R1 8 RGAEEEEEEEDDDSGEEMK 19 1 Q08495-2;Q08495;Q08495-3;Q08495-4;E5RFK4 Q08495-2 DMTN Dematin 1 RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK 148.28 2.9945999999999996e-21 240115700.0 5523.4400000000005 5914.509999999999 5746.17 5176.15 7904.120000000001 5056.49 5243.47 5379.33 9156.56 8975.0 10056.39 True False 6455.661636857259 6215.533296085247 6561.0633105107345 6444.306982366201 6741.43441852445 5591.564415573588 6196.140626424959 6141.866501007206 7082.613780021686 6947.541266591793 7559.110820755535 0.8540239440770645 0.8222571997514387 0.8679676044033647 0.8525218289790981 0.8918290230663191 0.7397119248761999 0.8196917300658986 0.8125117684666151 0.9369638768325104 0.9190950405853932 1.0 12.884000824672944 -8.942530367409034 2.518955235724534 0.9756537575134002 0.8323145626442199 0.6018864072747825 0.04239738567551939 0.10629768576685228 1.3272214250050498 0.007811305323625598 0.008000232022476616 1.141483485258281e-09 8.942530367409034 -0.14333919486918034 RGAEEEEEEEDDDS(ph)GEEMK ddPTM_A549_PD325901_60min_R1 7 RGAEEEEEEEDDDSGEEMK 19 1 Q08495-2;Q08495;Q08495-3;Q08495-4;E5RFK4 Q08495-2 DMTN Dematin 1 RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK 207.47 1.3527e-56 342958200.0 12655.34 12467.82 13323.670000000002 13110.83 15411.429999999998 13946.58 13581.809999999998 14068.0 15848.02 14935.080000000002 15031.840000000002 True False 13940.100800431093 13518.526947218095 14227.894367936384 13920.656192244676 14328.984323347197 13833.003676453867 14098.673211801595 13787.402703867492 15181.982832374104 13992.076499963308 13183.018974684732 1.057428562243609 1.0254500105914766 1.079259189056628 1.0559535883985622 1.0869273836943614 1.0493046928793244 1.0694570977160232 1.0458456238546994 1.1516317211958786 1.061371187194087 1.0 13.686393171826943 -5.7697566843283274 24.934764031240654 1.069951701907894 1.0414392847301617 0.06410697378537555 0.03532730562746836 440.9254494606613 1321885.0717177421 0.007205832305626606 0.022953619271787053 1.6991953686015985e-06 5.7697566843283274 -0.02851241717773223 RGAGEGDKPEEEDDEAQQPQPQS(ph)GPEEAEEGEEEEAER ddPTM_A549_MK2206_60min_R1 1 RGAGEGDKPEEEDDEAQQPQPQSGPEEAEEGEEEEAER 38 2 I3L2J0;I3L2I4 I3L2J0 CIC 1 RGAGEGDKPEEEDDEAQQPQPQS(1)GPEEAEEGEEEEAER 55.492 0.00057357 3969200.0 0.0 283.12 0.0 263.97 345.66 262.62 155.82 248.69 146.3 360.6 304.42 True False 0.0 297.5295986967063 0.0 328.6426618500638 294.8138718930334 290.41027408695265 184.13047703325037 283.94256908118354 113.16328359309304 279.14020955242324 228.8241124354166 0.0 1.300254573392833 0.0 1.436223911685968 1.2883863888087486 1.2691419230083025 0.8046812683921998 1.2408769602955352 0.49454265282043774 1.2198898384505168 1.0 7.838095274487589 -6.260339922045195 24.99997757599907 0.9039783090074552 0.5201018720481001 0.23255997659423666 0.4383925415690367 158.66630868339433 3607763.7338171736 0.061178183405755926 0.15249687621153757 5.49110916812189e-07 6.260339922045195 -0.38387643695935514 RGAGEGDKPEEEDDEAQQPQPQS(ph)GPEEAEEGEEEEAER ddPTM_A549_PD325901_60min_R1 1 RGAGEGDKPEEEDDEAQQPQPQSGPEEAEEGEEEEAER 38 2 I3L2J0;I3L2I4 I3L2J0 CIC 1 RGAGEGDKPEEEDDEAQQPQPQS(1)GPEEAEEGEEEEAER 65.021 0.00010206 2906500.0 0.0 0.0 153.49 158.57 162.89 0.0 158.34 226.33 0.0 210.54 172.33 True False 0.0 0.0 163.90675441035046 168.36450876140094 151.44916833999343 0.0 164.36571534697262 221.81567059754985 0.0 197.24646846901882 151.13450248987618 0.0 0.0 1.0845091736834205 1.1140044529056423 1.0020820252485916 0.0 1.0875459450960427 1.4676706307509648 0.0 1.3051054869633854 1.0 7.239689240673658 -5.737444905137178 24.50137477053611 0.6823123075920516 1.2456445640454643e-06 0.2540707295654657 0.49094271869058315 227.79873919386517 232606.31193865865 0.07212471732673835 0.2790092082868886 1.8304383021017654e-06 5.737444905137178 -0.6823110619474876 RGALSS(ph)SLR ddPTM_A549_PD325901_60min_R1 1 RGALSSSLR 9 1 A0A1W2PPE7;A0A1W2PQS2;A0A1W2PPU7;A0A1W2PRJ5;A0A1W2PR28;Q5JU85-3;Q5JU85 A0A1W2PPE7;A0A1W2PR28 IQSEC2 IQ motif and SEC7 domain-containing protein 2 1 RGALS(0.074)S(0.463)S(0.463)LR 62.408 0.0030088000000000003 4615300.0 522.3 509.93 503.78 489.23 666.21 502.19 612.35 483.21 562.69 531.44 809.67 True False 575.323511503062 552.9035906994906 537.9695402752383 519.4486259780552 619.4177078997307 498.10033114056375 635.6533143407773 473.5719974790884 539.0420961071845 497.8847877038822 710.0857229210118 0.8102169821643628 0.7786434409990162 0.7576121064119475 0.731529460754751 0.872313986755981 0.7014650697264776 0.8951782775267626 0.6669222914819362 0.759122566061149 0.7011615240703349 1.0 9.471849389839608 -10.641355314186752 0.8422737646350122 1.0049604843188933 0.7741382568374646 0.0 0.1082302498910577 0.3054769136286934 0.3740373576599877 0.044681707797368714 0.011087248628555719 2.283729625672441e-11 10.641355314186752 -0.23082222748142867 RGAPS(ph)SPATGVLPSPQGK ddPTM_A549_PD325901_60min_R1 1 RGAPSSPATGVLPSPQGK 18 1 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 RGAPS(0.615)S(0.384)PAT(0.001)GVLPSPQGK 111.6 7.5035e-10 22368000.0 4106.3 3307.8 3756.7 3812.3 5154.5 5230.8 3845.6 4200.6 5954.4 5069.7 4754.8 True False 4523.168553101713 3586.5599147251105 4011.652252872264 4047.777112638511 4792.465702059649 5188.202099066215 3991.9464123930666 4116.815737693051 5704.1572749837715 4749.598276799586 4169.989743160581 1.0846953665822316 0.8600884260225377 0.9620292854321728 0.9706923426556342 1.1492751774557775 1.2441762255112634 0.957303652590625 0.9872484085710898 1.3679067878618787 1.138995194074434 1.0 12.025828119768581 -6.753327843202855 6.387085348792523 1.1506556353812174 0.9600617939681392 0.23501159879430555 0.1237404670992864 0.1720665090013577 28.584306269345163 0.022777437227647725 0.046006684266842776 1.7647051649857763e-07 6.753327843202855 -0.19059384141307822 RGAPSS(ph)PATGVLPSPQGK ddPTM_A549_PD325901_60min_R1 1 RGAPSSPATGVLPSPQGK 18 1 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 RGAPS(0.218)S(0.781)PAT(0.001)GVLPSPQGK 126.9 5.0719e-12 23266000.0 8854.1 8172.3 7997.6 9452.5 10077.0 9743.3 9023.3 9618.8 11873.0 10261.0 10658.0 True False 9752.961713956087 8861.008401689345 8540.365229475656 10036.35945681492 9369.226283762755 9663.953795180814 9366.686619239224 9426.945488197382 11374.019099469691 9613.118708846781 9347.133566628567 1.043417390415434 0.9479920596540098 0.913688155689434 1.0737366044117578 1.002363582051835 1.0338949075985573 1.002091876880894 1.0085386520904935 1.2168456798432383 1.028456332663079 1.0 13.19030829423631 -8.567272510538457 24.99842103956887 1.1029411357950718 1.0012091422851173 0.2027851006567487 0.06586717326482011 142.34859303364206 80156.85295335724 0.014384201023210787 0.016310155762392434 2.708491577788986e-09 8.567272510538457 -0.10173199350995454 RGAPSSPATGVLPS(ph)PQGK ddPTM_A549_PD325901_60min_R1 1 RGAPSSPATGVLPSPQGK 18 1 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 RGAPSSPATGVLPS(1)PQGK 76.492 0.00010964 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RGAS(ph)GSIFSK ddPTM_A549_MK2206_60min_R1 1 RGASGSIFSK 10 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 RGAS(0.923)GS(0.077)IFSK 55.196000000000005 0.007390100000000001 4426800.0 3309.7 3581.8 3734.6 3139.7 5126.6 4039.0 3855.0 4055.4 5641.1 5472.9 4753.1 True False 3868.2964456039113 3764.0983208952475 4264.222436759333 3908.92664094649 4372.483931165954 4466.404299128785 4555.403600071751 4630.265369141627 4363.399856985629 4236.568088905871 3572.7740911135247 1.0827150967158634 1.0535506093871423 1.193532624233262 1.0940872669976727 1.2238344265990757 1.2501222258182978 1.2750326451936316 1.2959860464333233 1.221291843735267 1.185792322958058 1.0 11.802828978900415 -4.168391044570187 16.185553402070262 1.1437644390590183 1.1449230569529576 0.0 0.09694480518943016 0.0 0.0 0.015803630953927953 0.0 6.785923438140135e-05 4.168391044570187 0.00115861789393934 RGAS(ph)GSIFSK ddPTM_A549_PD325901_60min_R1 3 RGASGSIFSK 10 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 RGAS(0.973)GS(0.027)IFSK;RGAS(0.99)GS(0.01)IFSK;RGAS(0.993)GS(0.007)IFSK 72.681 0.00084365 36040300.0 8579.2 8432.400000000001 9239.5 8785.400000000001 10034.3 9627.2 9783.9 9790.1 8670.3 9388.5 10730.9 True False 9450.154068326767 9143.027941510374 9866.548031627037 9328.054204908942 9329.525384455743 9548.799275087991 10156.231668455513 9594.828775315129 8305.917442780436 8795.70850774857 9411.067328779742 1.0041532738191656 0.9715187047435435 1.048398410821523 0.9911792020000814 0.991335526409992 1.014635103702537 1.0791795780056745 1.0195261005065208 0.8825691234170989 0.9346132803503213 1.0 13.200142635949222 -8.721638584390625 24.97906394077147 0.9445465080559156 1.0152008517889026 0.44769922594466116 0.03742400558757033 138.16715289049986 86713.91960842126 0.008312947399914847 0.009425931203093789 1.8982849982357463e-09 8.721638584390625 0.07065434373298707 RGAS(ph)LLSPK ddPTM_A549_PD325901_60min_R1 2 RGASLLSPK 9 1 K7EID0;Q9UH92 K7EID0 MLX Max-like protein X 1 RGAS(1)LLSPK;RGAS(1)LLSPK 60.49 0.0033722 3639600.0 1185.63 1377.23 872.05 1355.76 1346.13 1308.71 1377.9099999999999 1161.42 1487.63 1468.75 1413.3400000000001 True False 1305.9942847853247 1493.294005489105 931.2325570626497 1439.5022160456383 1251.5824726963924 1298.0522996614172 1430.3471190712835 1138.254566983636 1425.1100844726777 1376.012874341557 1239.5081399004332 1.0536391353510854 1.20474723595527 0.7512920061480625 1.1613495464106192 1.0097412291273287 1.0472317670827775 1.1539634739197275 0.9183114901327468 1.1497383829904928 1.1101281468406403 1.0 10.275552030354918 -7.531533282912526 24.767055848584935 1.0659048311830257 1.035833449482249 0.013443513545975727 0.12399163056384647 920.3859719314428 2633894.4960784595 0.018303243400197757 0.027177809239330174 2.9408083111543877e-08 7.531533282912526 -0.030071381700776723 RGAS(ph)SS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 RGASSSPQR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RGAS(0.894)S(0.339)S(0.767)PQR 51.251999999999995 0.043329 43500000.0 2354.5 2404.2 1796.9 1512.0 1751.6 1858.4 1048.7 1668.5 1988.7 2359.0 2939.1 True False 2593.527106708711 2606.810371540633 1918.848439637492 1605.3928059988525 1628.5736586919543 1843.265806550557 1088.6088523706596 1635.2204585870709 1905.1218548905397 2210.052337410541 2577.6093324899625 1.0061754021519513 1.0113287295644846 0.7444295050654128 0.6228223904078001 0.631815550232648 0.7151067399224412 0.42233275564651485 0.6343942186954503 0.7391041888610009 0.8574039167043352 1.0 11.331817907248992 -5.7568073194609966 24.76138569522201 0.7773841720552395 1.0087521938036923 0.29159356823348104 0.1519543322566282 134.60161381297198 719502.1354943303 0.02713089168014258 0.0984550256857593 1.7506232036883494e-06 5.7568073194609966 0.23136802174845283 RGAS(ph)SSPQR ddPTM_A549_PD325901_60min_R1 2 RGASSSPQR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RGAS(0.857)S(0.105)S(0.038)PQR;RGAS(0.978)S(0.018)S(0.004)PQR 55.98 0.0069167000000000005 10432100.0 787.76 578.23 717.44 902.6899999999999 643.03 560.04 468.38 538.85 888.14 963.1400000000001 1232.52 True False 867.7328152817392 626.9594713983615 766.1297927171923 958.4471111422648 597.8657911330712 555.4792199206702 486.20445720737024 528.1022140303523 850.8145643900458 902.3271760294998 1080.9278535880119 0.8027666346106292 0.5800197203885938 0.7087705161580538 0.8866892530901237 0.5531042512675814 0.513891115005338 0.44980287592134127 0.48856379477814327 0.7871150341494741 0.8347709544483767 1.0 10.078054518424478 -9.402267288650377 1.3230652604607327 0.9452258844287913 0.6258056616627979 0.3884718107497268 0.13714874552818287 0.23609274525294424 0.8546164165777094 0.034661764649334285 0.02822932546376223 3.9603421804923014e-10 9.402267288650377 -0.31942022276599336 RGASS(ph)SPQR ddPTM_A549_PD325901_60min_R1 1 RGASSSPQR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RGAS(0.231)S(0.588)S(0.181)PQR 56.632 0.012194 4181600.0 489.46 478.45 374.83 417.23 585.18 294.31 292.75 270.01 320.26 524.43 676.47 True False 539.1496188785923 518.7706606204208 400.26821783589565 443.0013495019188 544.0789755614059 291.9132369381694 303.89076144894693 264.62443873125255 306.8005859341501 491.31740030021615 593.2684784966431 0.908778467793891 0.8744281542397102 0.674683102750015 0.7467131080762881 0.9170872805177773 0.49204238471911527 0.5122314305641412 0.446045000404905 0.5171361652511698 0.8281535562874106 1.0 9.212541321427063 -5.7012738205283116 6.049871145416234 0.7131882631759722 0.8970523014306495 0.15736644047362025 0.17559905582718607 0.3959729478406296 28.204335965926397 0.031074570360635715 0.12262038436126511 1.9894186248547517e-06 5.7012738205283116 0.18386403825467734 RGASSS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 RGASSSPQR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RGAS(0.069)S(0.13)S(0.801)PQR 50.292 0.02286 4029200.0 371.58 123.33 174.9 238.09 224.8 166.62 167.61 128.54 179.49 290.19 324.48 True False 409.3025280572618 133.72345192667265 186.76976575913935 252.79627855837757 209.01082351789884 165.26310196268489 173.9884902697113 125.97616886232076 171.9466594932886 271.86735387586486 284.5710170481926 1.4383141765556038 0.46991240820573926 0.656320407104247 0.8883416209443638 0.7344768475930299 0.5807446720222296 0.6114062214573526 0.4426879805577196 0.6042311029312206 0.9553585487935466 1.0 8.15264492370489 -3.142946747962678 17.09503539442207 0.7606862208458604 0.7326282498506842 0.0 0.27749481176072605 0.0 0.0 0.03557945174710774 0.0 0.0007195372003375906 3.142946747962678 -0.02805797099517615 RGAT(ph)PPAPPR ddPTM_A549_MK2206_60min_R1 2 RGATPPAPPR 10 1 Q6SPF0 Q6SPF0 SAMD1 Atherin 1 RGAT(1)PPAPPR;RGAT(1)PPAPPR 81.278 0.00069746 85857000.0 2343.0299999999997 2684.1 2163.54 2097.1800000000003 3255.8 2191.26 2312.1400000000003 2286.98 3159.7 3281.1 3805.5 True False 2738.4761824163306 2820.7092252819634 2470.3625049071607 2610.9891941459887 2776.8761329321824 2423.1376787593326 2732.2259091750716 2611.16641858251 2444.0329950040746 2539.897231177083 2860.489323543057 0.9573453604170078 0.9860932540689153 0.8636153557977005 0.9127771156691358 0.9707696197560669 0.8471060034434905 0.9551603240353592 0.9128390716551492 0.8544108082797696 0.8879240381261475 1.0 11.48204624434584 -11.085145198226776 1.4292402545989202 0.9997213532642807 0.9103345833429529 0.0 0.0560353401974833 0.39736654458081816 1.4572646376788396 0.03347685823866876 0.007448139138967162 8.219677944645592e-12 11.085145198226776 -0.08938676992132777 RGAT(ph)PPAPPR ddPTM_A549_PD325901_60min_R1 2 RGATPPAPPR 10 1 Q6SPF0 Q6SPF0 SAMD1 Atherin 1 RGAT(1)PPAPPR;RGAT(1)PPAPPR 70.563 0.0018855999999999999 137950000.0 3171.1 2789.7 2872.2 2460.8 3109.8 2726.1000000000004 2666.2 2270.3 2945.6000000000004 3590.7999999999997 4434.0 True False 3493.0277375595642 3024.797809453 3067.124763941679 2612.798027117712 2891.378376227588 2703.899545435575 2767.66370000062 2225.017085484104 2821.8066755999266 3364.076275190238 3888.6461094418314 0.898263210189869 0.7778537116320862 0.7887384651677465 0.6719042961440242 0.7435437154353475 0.6953318634139447 0.7117293839829217 0.5721829713641591 0.7256527326434863 0.8651021925142761 1.0 11.925052231343582 -10.513711209237874 0.902102162722007 0.9947102289648331 0.7291319838150265 0.42563559528596884 0.08524377922395864 0.29509764661924126 0.4429996675836151 0.04851462075358849 0.014969279518128946 3.064000210253609e-11 10.513711209237874 -0.26557824514980655 RGDDS(ph)FGDKYR ddPTM_A549_MK2206_60min_R1 4 RGDDSFGDKYR 11 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 RGDDS(1)FGDKYR;RGDDS(1)FGDKYR;RGDDS(1)FGDKYR;RGDDS(1)FGDKYR 119.0 4.8038e-06 109839000.0 20926.9 21691.1 21954.0 20236.4 28191.3 24717.699999999997 24537.800000000003 24503.7 32486.0 34315.6 33756.7 True False 24458.849106417056 22795.084339821005 25067.407319823924 25194.31890844652 24044.397114789295 27333.310607718657 28996.000637572157 27977.174514433995 25127.972869482015 26563.68212678073 25373.97975247562 0.9639342879995291 0.8983645672530733 0.9879178419923746 0.9929194850085914 0.9476005478582206 1.0772181137667958 1.142745478652916 1.1025930810756792 0.9903047576535721 1.0468867077971493 1.0 14.631062194531598 -6.319823229431137 1.288621137056576 1.0189266057504547 0.9344119733718173 0.3137460771680648 0.05677618946408274 0.6174174693855675 1.868245064694605 0.009718374503824538 0.04057626637417704 4.78824948436326e-07 6.319823229431137 -0.08451463237863743 RGDDS(ph)FGDKYR ddPTM_A549_PD325901_60min_R1 8 RGDDSFGDKYR 11 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 RGDDS(1)FGDKYR;RGDDS(1)FGDKYR;RGDDS(1)FGDKYR;RGDDS(1)FGDKYR;RGDDS(1)FGDKYR;RGDDS(0.999)FGDKY(0.001)R;RGDDS(0.998)FGDKY(0.002)R;RGDDS(1)FGDKYR 133.47 1.3473e-08 184058000.0 36212.7 36025.600000000006 38765.2 35523.299999999996 44741.4 38160.3 40045.9 40097.5 42653.6 45233.600000000006 43731.0 True False 39888.98664561924 39061.60374385421 41396.039586084524 37717.49356173216 41598.91841345072 37849.53516880713 41569.8686384573 39297.72390661979 40861.01752388952 42377.54277638553 38352.36423364924 1.0400659109985666 1.0184927194027509 1.0793608272463384 0.9834463745690007 1.084650692197824 0.9868892289982754 1.0838932480200298 1.02464931932778 1.0654106556497307 1.1049525530737612 1.0 15.227027895035873 -6.16920374523871 17.272239215107756 1.0329402171687647 1.043209997165599 0.0 0.041738384733993106 21.29407686258119 3975.45622221064 0.0049508613097971575 0.013099187919894072 6.77323672926385e-07 6.16920374523871 0.010269779996834316 RGDDSFGDKYR ddPTM_A549_MK2206_60min_R1 2 RGDDSFGDKYR 11 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 74.611 0.00046414 10496800.0 3356.5 3277.3 3016.9 2992.1000000000004 4223.4 3256.8 2885.7 2850.8999999999996 4422.200000000001 4644.8 4355.5 False True 3922.9951414537645 3444.100571519906 3444.7417847853153 3725.1646343204734 3602.143454704148 3601.4324143111235 3409.9943368941767 3255.0238055150826 3420.578760802297 3595.5364540463 3273.9091443152784 1.1982602352498206 1.051984163183069 1.0521800187298007 1.1378338463633733 1.100257611289796 1.1000404273785505 1.0415665757906547 0.9942315629518956 1.0447995378068726 1.0982395343161817 1.0 11.676798570168547 -7.835614197834615 3.5070784632485226 1.019633089706517 1.1034280773018597 0.35459779815655634 0.046068771633564584 0.1484738811091631 3.6566453247690505 0.006177236059561783 0.00882028810799496 1.4601107624959031e-08 7.835614197834615 0.08379498759534276 RGDGEKS(ph)DEENEEK ddPTM_A549_MK2206_60min_R1 3 RGDGEKSDEENEEK 14 2 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK 115.66 7.998100000000001e-07 28416200.0 9323.0 10106.3 8515.8 7654.3 2292.99 1722.1499999999999 2118.37 1979.4699999999998 2869.79 12492.1 12134.9 True False 10896.49447453403 10620.667502502556 9723.468491124926 9529.603843614583 1955.6942085054848 1904.3867699293485 2503.2504083745766 2260.0659343726315 2219.7871471129356 9670.125933859757 9121.469423797831 1.1945985858490273 1.1643592725085863 1.0659980359914911 1.0447443718609561 0.21440560918870114 0.20878069984654235 0.27443499419552064 0.24777432553532877 0.24335850332639727 1.0601500136184732 1.0 13.155050538839577 -6.649753790203747 6.759585403148836 0.518766001378526 1.1283433671708434 0.5341038797806514 0.291335808391542 0.17289796005203514 9.678808818839439 0.05046859885228393 0.10554211544607454 2.2399906719595747e-07 6.649753790203747 0.6095773657923174 RGDGEKS(ph)DEENEEK ddPTM_A549_PD325901_60min_R1 2 RGDGEKSDEENEEK 14 2 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK 155.88 1.9829999999999999e-19 47756000.0 9900.1 9851.7 10340.599999999999 10066.8 11364.0 9227.3 10979.3 9385.3 11337.2 11451.2 11162.2 True False 10905.150863931582 10681.937333544161 11042.375299079215 10688.6033726384 10565.831843671715 9152.155928101563 11397.123269603484 9198.102828874584 10860.736910175001 10728.169277725978 9789.320163015707 1.1139844935434342 1.091182753823987 1.1280022632008277 1.0918637039802015 1.0793223296128047 0.9349123101192087 1.1642405274129348 0.9396058843417179 1.1094475131385664 1.095905445840587 1.0 13.256992957412233 -14.999993309445514 0.010034918338422322 3.3431690409850446e-06 1.9781121625305536 0.06541506724630441 0.0699134716093563 13937.762808226222 10.89249802209018 1243.3721271862016 925.8270283863545 1.0000154056896887e-15 14.999993309445514 1.9781088193615126 RGDGEKS(ph)DEENEEKEGSK ddPTM_A549_MK2206_60min_R1 8 RGDGEKSDEENEEKEGSK 18 3 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK 169.56 9.2886e-31 301018000.0 32542.5 33304.50000000001 29980.199999999997 28052.600000000006 7311.82 2851.05 2394.77 3514.95 6046.3 42856.0 43005.00000000001 True False 38034.87841226251 34999.55679497902 34231.843168888794 34925.488259329075 6236.260963909382 3152.746218626179 2829.8687105950257 4013.2049265829164 4676.822703957065 33174.79983521536 32325.671622380556 1.176615256647265 1.0827170802151938 1.0589677321719901 1.0804257578100418 0.19291976472320935 0.0975307259027957 0.08754245677097632 0.12414915839844111 0.14467828413869935 1.0262679217543902 1.0 14.980392724409787 -6.745357335861137 24.345122608614933 0.4503818988537027 1.095561975924205 0.5233885933652528 0.3253464496735335 152.25134835147392 230477.29580557699 0.057771392314862946 0.11993668316163257 1.7973914196719823e-07 6.745357335861137 0.6451800770705023 RGDGEKS(ph)DEENEEKEGSK ddPTM_A549_PD325901_60min_R1 4 RGDGEKSDEENEEKEGSK 18 3 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK 156.02 4.335e-23 902630000.0 40925.3 42908.2 38430.1 38284.200000000004 45067.200000000004 36396.4 39785.7 41746.600000000006 40891.7 40809.4 43159.5 True False 45080.00632838647 46524.22460034102 41038.19768496457 40648.92808427335 41901.83534539969 36099.99978558795 41299.766585070436 40913.93131342586 39173.16405371725 38232.687519424246 37851.15511061226 1.1909809937543352 1.2291361905438154 1.084199347814851 1.0739151279659809 1.1070160269336602 0.9537357494135406 1.09110980799345 1.080916320621214 1.034926515168208 1.010079808864407 1.0 15.208049707420264 -2.0000000000000333 0.29258785523779696 1.011690754395543 2.8072814061210183 0.6390399858818292 0.04606928622374246 19.150913267259938 0.23918433411378207 0.01519848148572762 18.150212460163004 0.009999999999999233 2.0000000000000333 1.7955906517254754 RGDLPFVVPR ddPTM_A549_MK2206_60min_R1 2 RGDLPFVVPR 10 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 113.93 0.00010055 3218800.0 325.16999999999996 420.73 295.551 309.7 444.8 484.56 475.83000000000004 263.91999999999996 481.40999999999997 530.79 577.18 False True 380.05074635677676 442.1433599168734 337.4645759670802 385.57651390296127 379.37050922299704 535.8358175751043 562.2821517567161 301.33146822110217 372.3714036537999 410.8841703503347 433.85027664238146 0.8759951688818418 1.0191150812180485 0.777836489073508 0.8887317460921852 0.8744272613100312 1.2350708214870831 1.2960281046915172 0.6945517484813931 0.8582947244741347 0.9470644424390272 1.0 8.761053438865337 RGDLPFVVPR ddPTM_A549_PD325901_60min_R1 2 RGDLPFVVPR 10 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 120.09 5.4316000000000006e-05 11490200.0 661.5699999999999 646.36 555.15 703.78 655.3 744.04 723.39 720.3 863.4000000000001 781.78 702.9100000000001 False True 728.7320993779065 700.8310256006168 592.825817388143 747.2508921996517 609.2739886622733 737.9807849256754 750.9190023041966 705.9330514355818 827.1143005543787 732.4182773805906 616.4565261136123 1.1821305615371194 1.1368701537137338 0.9616668690743747 1.2121712733104137 0.9883486715655025 1.1971335425357574 1.2181215876459113 1.1451465294496355 1.341723650439451 1.188110185154576 1.0 9.26785534592464 RGDS(ph)ES(ph)EEDEQDSEEVR ddPTM_A549_MK2206_60min_R1 3 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RGDS(0.999)ES(0.999)EEDEQDS(0.002)EEVR;RGDS(1)ES(1)EEDEQDSEEVR;RGDS(0.999)ES(0.995)EEDEQDS(0.006)EEVR 53.828 0.02242 13088400.0 256.17 250.99 458.53 215.43 593.5 177.97 492.16 185.83 563.52 272.95 544.11 True False 299.405233244812 263.7643189350321 523.5564488639365 268.21035967102034 506.1969362046957 196.80266727307506 581.5791013777723 212.1719715805071 435.883619756526 211.29040542799214 408.99247032794995 0.7320556121845823 0.6449124081026067 1.2801126838450683 0.6557831234789147 1.2376681062093944 0.4811889742499884 1.4219799716885595 0.5187674272105238 1.065749742060076 0.5166119690628271 1.0 8.675930472744875 -5.720244857582281 24.999104004808082 0.9880899017529668 0.6884832047330112 0.01911795770965019 0.3241392435731184 194.87923556438082 118260.80506001737 0.03378138598276336 0.1308320571391033 1.904386711678754e-06 5.720244857582281 -0.2996066970199557 RGDS(ph)ES(ph)EEDEQDSEEVR ddPTM_A549_PD325901_60min_R1 4 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RGDS(1)ES(1)EEDEQDSEEVR;RGDS(0.927)ES(0.953)EEDEQDS(0.12)EEVR;RGDS(0.97)ES(0.945)EEDEQDS(0.085)EEVR;RGDS(1)ES(0.999)EEDEQDS(0.001)EEVR 68.44 0.00082685 45435300.0 850.9000000000001 949.48 1259.12 1004.3500000000001 1243.67 936.739 969.73 1196.18 343.19 773.39 809.6199999999999 True False 937.2827416005273 1029.4960118003498 1344.5714549036452 1066.3864184556542 1156.318909628582 929.1105081588254 1006.6336058066174 1172.321251514943 328.7669177753729 724.558023412437 710.041872604036 1.3200386875257075 1.4499088737185808 1.8936509335322858 1.5018641288643244 1.6285221396702307 1.3085291783586908 1.4177102008292117 1.6510593202278692 0.4630246897547604 1.0204440771290908 1.0 9.471760295542643 -8.754364479601533 24.999998045726034 0.7464283169583746 1.52380125153157 0.6781379396374325 0.21077977312163207 66.42714479789238 234727.969388581 0.040995138283218026 0.0460030953093651 1.760497936636014e-09 8.754364479601533 0.7773729345731953 RGDS(ph)ESEEDEQDSEEVR ddPTM_A549_MK2206_60min_R1 4 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RGDS(0.514)ES(0.486)EEDEQDSEEVR;RGDS(0.499)ES(0.499)EEDEQDS(0.002)EEVR;RGDS(0.841)ES(0.159)EEDEQDSEEVR;RGDS(0.981)ES(0.018)EEDEQDS(0.001)EEVR 113.26 9.5503e-10 18443000.0 308.28 175.18 127.85 0.0 122.26 342.26 392.306 340.52 614.3399999999999 304.15999999999997 608.94 True False 360.31012727763033 184.0959137457226 145.98105246604212 0.0 104.27571595684267 378.47772602619904 463.5829221088839 388.7897527987638 475.19297089939016 235.45004475170563 457.72339211097346 0.7871787491915518 0.4021990506027911 0.31892853846248154 0.0 0.2278138232698437 0.8268699667733792 1.0128014650308494 0.8493989153704932 1.038166235524579 0.5143937338789571 1.0 8.838332213022321 -7.398102006186987 3.8588847388269834 1.000537285240343 0.3307701899754338 0.5328911399583414 0.23333214906251865 0.09034667211572162 2.368229106112753 0.028150462105496772 0.04578826038797739 3.998508225990798e-08 7.398102006186987 -0.6697670952649091 RGDS(ph)ESEEDEQDSEEVR ddPTM_A549_PD325901_60min_R1 5 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RGDS(0.997)ES(0.003)EEDEQDSEEVR;RGDS(0.838)ES(0.161)EEDEQDS(0.001)EEVR;RGDS(0.57)ES(0.43)EEDEQDSEEVR;RGDS(0.972)ES(0.028)EEDEQDSEEVR;RGDS(0.499)ES(0.499)EEDEQDS(0.002)EEVR 153.82 2.1558e-18 29958400.0 549.15 564.54 468.82000000000005 241.91 1077.43 642.34 896.8 595.517 637.73 747.8199999999999 655.2900000000001 True False 604.899303737137 612.1157670533022 500.6369444436805 256.852231282528 1001.7550337317157 637.1089960071487 930.9282147477898 583.6389462609515 610.9284258658137 700.6025175762402 574.6934842255614 1.0525598781623215 1.0651169429529375 0.8711373248268559 0.4469377821964588 1.743111869593665 1.1086066111671622 1.6198690959621351 1.0155656228597139 1.0630509004101227 1.2190890218989516 1.0 9.166648882016153 -6.724926641753621 24.99999867507118 1.121932263878457 0.8745372692849688 0.22872767740323285 0.28981781388985384 276.21373812442283 189120.24956187056 0.04147500106474972 0.08633510306915117 1.883967290320702e-07 6.724926641753621 -0.24739499459348824 RGDS(ph)VDGPPDGR ddPTM_A549_MK2206_60min_R1 2 RGDSVDGPPDGR 12 1 A0A140LJL2;Q8N350 A0A140LJL2 DOS Protein Dos 1 RGDS(1)VDGPPDGR;RGDS(1)VDGPPDGR 76.34100000000001 0.00048725 4181300.0 630.5699999999999 604.8 723.56 631.46 591.67 687.51 537.25 674.78 989.81 884.39 1041.53 True False 736.9948000436469 635.5817366903359 826.1716880901794 786.167728347317 504.6361267805093 760.2618518677971 634.8613707233591 770.4321314270817 765.6196154017731 684.6056847644692 782.8893562343452 0.9413779791164252 0.8118410751519847 1.055285375271954 1.0041875292937186 0.6445816675906559 0.9710974428425171 0.8109209375089826 0.9840881413087769 0.9779410197685678 0.8744603299467308 1.0 9.612664619269077 -8.393882578481197 9.865701849697313 0.9891269223005951 0.8925259787376741 0.05645905310576382 0.1110112925831764 0.516330044725945 38.79764016946439 0.016535753325535422 0.019989815850144095 4.037545425539842e-09 8.393882578481197 -0.09660094356292093 RGDS(ph)VDGPPDGR ddPTM_A549_PD325901_60min_R1 2 RGDSVDGPPDGR 12 1 A0A140LJL2;Q8N350 A0A140LJL2 DOS Protein Dos 1 RGDS(1)VDGPPDGR;RGDS(1)VDGPPDGR 74.141 0.00056503 7685800.0 705.4200000000001 1224.98 815.4200000000001 933.12 1174.34 1169.44 911.3199999999999 1089.31 930.67 1109.07 984.23 True False 777.0337190972432 1328.213363667684 870.7593047187959 990.7567031307212 1091.8584096530658 1159.9164683665963 946.0007812934391 1067.582857502837 891.5571763921048 1039.043130924929 863.1759495480229 0.900203161944114 1.538751588668758 1.00878541063933 1.1478038789768208 1.2649314548497161 1.3437775565618493 1.0959535906772948 1.2368079278180142 1.0328800018801993 1.203744302038297 1.0 9.753510857715602 -8.809445397339212 6.455558803881312 1.0148343400329114 1.2003398009274842 0.0457630659865792 0.16981066385570415 0.20106131114630352 19.416324836745577 0.025037118055916647 0.026710838407169948 1.5507957518582763e-09 8.809445397339212 0.18550546089457276 RGDSES(ph)EEDEQDS(ph)EEVR ddPTM_A549_PD325901_60min_R1 1 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RGDS(0.098)ES(0.934)EEDEQDS(0.968)EEVR 65.107 0.0041371 10287000.0 0.0 301.21 242.61 363.42 263.15 185.02 465.43 430.49 206.34 379.87 0.0 True False 0.0 326.5940237965868 259.07497353244617 385.8676280132959 244.66725181821636 183.51325846318548 483.1421933430685 421.9035392371284 197.66824736667877 355.8849433709804 0.0 0.0 RGDSES(ph)EEDEQDSEEVR ddPTM_A549_MK2206_60min_R1 1 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RGDS(0.163)ES(0.832)EEDEQDS(0.005)EEVR 60.918 0.0028293000000000003 1612000.0 0.0 169.45 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 225.22 True False 0.0 178.07428122053142 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 169.291658244217 0.0 1.0518786517150467 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 7.403367076734239 -10.714498675642998 0.9144638942411427 1.0134220259710711 0.12031762205447354 0.0 0.41688987856500903 0.37541313466627724 0.5448202255112723 0.22538186065881463 0.055225627925293834 1.9297512208502857e-11 10.714498675642998 -0.8931044039165976 RGDSES(ph)EEDEQDSEEVR ddPTM_A549_PD325901_60min_R1 2 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RGDS(0.181)ES(0.819)EEDEQDSEEVR;RGDS(0.007)ES(0.993)EEDEQDS(0.001)EEVR 103.27 6.0233e-09 5675300.0 212.37 185.97 174.78 345.51 419.29 0.0 260.62 190.76 148.56 0.0 236.21 True False 233.9296460614691 201.64234456177172 186.64162183752074 366.85136798985724 389.8405168719742 0.0 270.53803671673603 186.955142151675 142.31653983131625 0.0 207.15766745856007 1.1292347945955923 0.9733762068068679 0.9009641020159519 1.7708799895772256 1.8818541531896622 0.0 1.3059523214165105 0.9024775401522303 0.686996245793245 0.0 1.0 7.694585409076758 -7.239252967142984 24.99985828715483 0.837492671927426 1.3118970186952092 0.294278508671858 0.47938104556622857 917.2144149432346 1033526.3290034333 0.05941741402577105 0.10286149474977146 5.764306072253416e-08 7.239252967142984 0.4744043467677832 RGDSQECS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RGDSQECSPR 10 1 Q13111;Q13111-3;Q13111-2 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 RGDSQECS(1)PR;RGDSQECS(1)PR 87.719 0.00030065 44555000.0 1525.58 1845.25 1502.37 942.79 1166.95 736.88 944.77 1056.4 1319.49 2477.9 2404.3 True False 1783.060607150017 1939.1653433000047 1715.4286569683827 1173.7735923234507 995.2932008493171 814.8561524986432 1116.4224796990363 1206.147935089316 1020.6276217925512 1918.1406690237106 1807.2459546957239 0.9866175671978312 1.072994706814265 0.9491949075947441 0.6494819309312398 0.5507237121008741 0.45088282000655305 0.6177479478087985 0.6673955650338631 0.5647419595217125 1.0613611633988456 1.0 10.819577145858034 -2.8307092754879366 12.372544860788286 0.764101387219858 0.9911763036682409 0.0 0.22370612299152096 0.0 0.0 0.032062182111199884 0.0 0.001476694728406078 2.8307092754879366 0.22707491644838296 RGDSQECS(ph)PR ddPTM_A549_PD325901_60min_R1 3 RGDSQECSPR 10 1 Q13111;Q13111-3;Q13111-2 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 RGDSQECS(1)PR;RGDS(0.432)QECS(0.568)PR;RGDS(0.001)QECS(0.999)PR 94.54700000000001 0.00024089 136169000.0 2121.58 2472.44 2914.2599999999998 2019.8000000000002 2117.48 2141.05 2003.1599999999999 2487.71 1856.31 2379.5099999999998 2873.07 True False 2336.9612397753513 2680.8011958289353 3112.039208469005 2144.5584587013773 1968.755509709433 2123.613998662864 2079.3913499712125 2438.0906724792594 1778.2957461919127 2229.2673325102837 2519.700603891305 0.9274757628609764 1.0639364024792606 1.2350829315446925 0.8511163808070784 0.781345016415435 0.8428040995756624 0.825253344290151 0.9676112585415858 0.7057567646908517 0.8847350074320377 1.0 11.299036604521364 -6.294012153090783 23.878042325829846 0.8558040063255985 1.074342167967418 0.48369470050458274 0.1003759329323145 277.41296866554876 203362.04597215576 0.017334937369385718 0.04028660364129377 5.08145222666717e-07 6.294012153090783 0.2185381616418196 RGDVHSLLS(ph)NPPDPDEPSESTLDIPEGGSSSR ddPTM_A549_MK2206_60min_R1 1 RGDVHSLLSNPPDPDEPSESTLDIPEGGSSSR 32 1 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 RGDVHS(0.146)LLS(0.854)NPPDPDEPSESTLDIPEGGSSSR 78.499 2.8667e-06 3040200.0 997.12 1233.2 899.2 1169.3 1384.7 937.93 1078.2 1007.1 1377.2 1451.6 1549.6 True False 1165.4094787565548 1295.9646125769218 1026.7200811690652 1455.7785524918722 1181.0124643009983 1037.181130052455 1274.0949835531421 1149.859509114398 1065.2663989364846 1123.6825518200155 1164.7915532156937 1.0005305031094662 1.1126150503058616 0.881462505745815 1.2498189469805454 1.013926020531762 0.8904435537749749 1.0938394771456657 0.9871805010432363 0.914555394907831 0.9647069887464528 1.0 10.185856083276636 -6.99951321118925 24.999963766463452 0.9672355413781479 1.061943955946582 0.14762381209909692 0.09553114989501502 22.380695811196077 1149267.443455204 0.013011856898149961 0.02442521867999142 1.0011215010715955e-07 6.99951321118925 0.09470841456843404 RGDYDNLEGLS(ph)WVDYGER ddPTM_A549_PD325901_60min_R1 1 RGDYDNLEGLSWVDYGER 18 1 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-4;I3L1N8 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 RGDYDNLEGLS(1)WVDYGER 81.477 9.749e-05 4702600.0 737.15 819.42 793.42 968.73 833.72 830.61 1017.1 932.62 834.11 1093.7 1099.7 True False 811.9849253388518 888.4753991547396 847.2662524220492 1028.566251954543 775.1623833778583 823.8457875478682 1055.806297078476 914.0181624737636 799.0552573956592 1024.6435953479902 964.4438715726616 0.8419203535554599 0.9212307997830453 0.8785023964540956 1.06648637859798 0.8037402758481391 0.8542184898790135 1.09473068179368 0.9477152475273944 0.828514007863088 1.062419105507057 1.0 9.913553468940712 RGEAHLAVNDFELAR ddPTM_A549_MK2206_60min_R1 2 RGEAHLAVNDFELAR 15 1 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 0 ; 109.79 9.5831e-07 9174300.0 378.17999999999995 367.04 351.03 398.32 484.96000000000004 491.76 459.55 316.39 547.16 306.6 655.1 False True 442.00753838670767 385.72076824540505 400.81133239855086 495.90841788126426 413.6230264226275 543.797716796131 543.0442864884494 361.2392514037378 423.22913363497474 237.3388470570522 492.4205901597839 0.897621966301779 0.7833156776004103 0.8139613582537094 1.0070830257531445 0.8399791452433221 1.104335861787737 1.102805807353098 0.7335989977318383 0.859487076886128 0.4819840026998849 1.0 8.94374727795849 -6.24236238485762 24.106109479022518 0.9395517095773127 0.8268012469072468 0.0 0.17508475796251421 741.6094149525877 937110.8349489011 0.015613094284382399 0.041223481154074426 5.723182767446631e-07 6.24236238485762 -0.11275046267006594 RGEDVETSKK ddPTM_A549_MK2206_60min_R1 1 RGEDVETSKK 10 2 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 48.44 0.010381999999999999 1562600.0 1017.3 946.66 995.8 1149.4 712.04 548.89 612.88 509.39 1115.7 1519.3 1517.7 False True 1188.995369402924 994.8409504882171 1137.0194137323788 1431.0030515985272 607.2998592336843 606.9731754763059 724.2323627527817 581.5975924414493 862.9957314067931 1176.0890748003244 1140.8132036109048 1.0422349299951237 0.8720454385865662 0.9966744863519129 1.2543710460828406 0.5323394376147271 0.5320530771866182 0.6348386926627774 0.5098096608634745 0.7564741788359715 1.030921689087893 1.0 10.15584686920181 -6.757607094001123 24.999662335117012 0.7869299906600943 1.026049777599036 0.3626309475698548 0.19365795153048018 124.81797823470535 814229.9507369023 0.03197326140851661 0.06461966383356807 1.7474023120190847e-07 6.757607094001123 0.23911978693894176 RGEEGHDPKEPEQLR ddPTM_A549_MK2206_60min_R1 2 RGEEGHDPKEPEQLR 15 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 134.9 4.4361999999999996e-10 122128000.0 2098.13 2277.16 1778.25 1653.26 2528.6000000000004 2003.43 1708.3600000000001 1852.04 2566.2 3354.8 3221.7 False True 2452.243049646473 2393.057717463236 2030.432589344853 2058.308774217661 2156.646289616165 2215.431632830797 2018.7468986299814 2114.5723416346254 1984.9597973793268 2596.948349990211 2421.6629756033826 1.01262771671829 0.9881877625299947 0.8384455681075726 0.849956742516911 0.8905641748430391 0.9148389578359056 0.8336200862661286 0.8731901849834235 0.8196680617313206 1.0723822332639636 1.0 11.241782382866045 -5.63618014159016 6.668858474182973 0.8953963589686776 1.006210370992532 0.22473304183772058 0.07268260872320989 0.2088976087883101 11.149369657207561 0.009702476595972924 0.03837770721802532 2.3111059645928327e-06 5.63618014159016 0.11081401202385444 RGEEGHDPKEPEQLR ddPTM_A549_PD325901_60min_R1 2 RGEEGHDPKEPEQLR 15 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 138.39 1.7021999999999998e-10 98367000.0 4979.4 4976.0 4558.3 4218.299999999999 5451.0 4956.1 5008.7 4718.6 4421.0 4556.6 6101.700000000001 False True 5484.905022359461 5395.344983273521 4867.653649284645 4478.8548105456075 5068.140564929122 4915.739164789719 5199.308819365808 4624.483821329912 4235.200744441632 4268.895498365779 5351.229581863153 1.024980322456987 1.008243974723097 0.9096327441794901 0.8369767624483403 0.9470983233659979 0.9186186257922039 0.9716101205950408 0.8641908837183159 0.7914444109809713 0.7977410486805288 1.0 12.385654710351561 -5.751653854587194 4.798582137541257 0.9019113753343109 1.0199436934842028 0.3493029161599617 0.06433712573439977 0.19245500151313397 11.404074776634475 0.01080650728554433 0.04104420299154456 1.7715203493491905e-06 5.751653854587194 0.1180323181498919 RGEEGHDPKEPEQLRK ddPTM_A549_MK2206_60min_R1 2 RGEEGHDPKEPEQLRK 16 3 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 114.01 3.6829e-08 67241000.0 5238.2 5299.799999999999 5037.0 4892.5 6038.0 4871.4 4512.5 3995.9 7417.5 8760.5 8264.8 False True 6122.280098305709 5569.537182723943 5751.322340801359 6091.162719632668 5149.818198490235 5386.888314626387 5332.362839253898 4562.331061930515 5737.448093313519 6781.496965568508 6212.422063124076 0.9854900449611376 0.8965162260600109 0.9257777855983531 0.9804811485344527 0.8289549786159437 0.8671156370076781 0.8583387904221662 0.734388458410089 0.9235444783074342 1.0916027431269308 1.0 12.600940132367242 -9.688840002758074 1.3842663286701034 0.9830774798990041 0.886535478861418 0.34387385566185824 0.07474420458525503 0.37036630969483253 1.4367211317318087 0.01811538547876963 0.013071539583179305 2.0471987006873773e-10 9.688840002758074 -0.09654200103758603 RGEEGHDPKEPEQLRK ddPTM_A549_PD325901_60min_R1 2 RGEEGHDPKEPEQLRK 16 3 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 116.0 3.1268e-08 71134000.0 5362.4 5519.2 5451.200000000001 5494.5 6450.200000000001 7237.700000000001 6656.5 7608.5 7747.1 6507.2 7916.1 False True 5906.786900409762 5984.322353634083 5821.151212728535 5833.882786085119 5997.160203981988 7178.758570851789 6909.8167500765685 7456.742498747221 7421.516328265955 6096.334281474303 6942.469884292398 0.8508192327595243 0.8619875135755128 0.8384841864275293 0.8403180544267826 0.8638366898142102 1.0340352483334503 0.9952966113270857 1.0740763190947915 1.0690023078180602 0.8781218187589824 1.0 12.76123329845972 -7.243129745987345 4.779209687576618 1.0341055046784942 0.8488761414757108 0.6779872325159546 0.05243588234103417 0.043642411657459614 2.7688485484078464 0.004511467009346191 0.0077186883972608904 5.713079322572517e-08 7.243129745987345 -0.18522936320278338 RGEGDAPFSEPGT(ph)TSTQRPSSPETATK ddPTM_A549_MK2206_60min_R1 3 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.001)EPGT(0.177)T(0.177)S(0.177)T(0.177)QRPS(0.144)S(0.144)PET(0.001)ATK;RGEGDAPFSEPGT(0.181)T(0.181)S(0.181)T(0.181)QRPS(0.151)S(0.126)PETATK;RGEGDAPFSEPGT(0.176)T(0.176)S(0.176)T(0.176)QRPS(0.146)S(0.146)PET(0.001)ATK 101.36 1.0069e-12 27680100.0 1972.71 2423.4 1936.59 1938.79 2800.66 1702.3400000000001 1767.3600000000001 2433.88 2709.5400000000004 2965.08 3509.1 True False 2305.6552198710724 2546.740708821693 2211.227582285589 2413.7936370355915 2388.6866240118675 1882.4804888781628 2088.4664349216114 2778.8899434448945 2095.83351624627 2295.266368662506 2637.6936237669015 0.8741179032682183 0.965518013871786 0.8383185834629746 0.9151152413176943 0.905596693447882 0.7136842853605508 0.791777489282119 1.0535302198882182 0.7945704904321682 0.8701792914768571 1.0 11.365061285513331 -11.037566192477701 1.2966441812574134 1.0009149549418628 0.8655569781905514 0.0 0.09489662688983364 0.54016325480248 1.600216932377418 0.06490039946535162 0.01412363920091917 9.171361405210276e-12 11.037566192477701 -0.13535797675131134 RGEGDAPFSEPGT(ph)TSTQRPSSPETATK ddPTM_A549_PD325901_60min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFSEPGT(0.172)T(0.172)S(0.172)T(0.172)QRPS(0.153)S(0.153)PET(0.004)AT(0.001)K 55.101000000000006 0.0017366 4612600.0 549.56 510.46 478.14 952.17 654.73 564.14 469.62 956.51 769.35 661.69 557.34 True False 605.3509266353108 553.4782556595256 510.58945568939316 1010.9833783650313 608.74402349588 559.5458308800208 487.4916460859247 937.4316576824208 737.0168949866932 619.9107804752779 488.790713269353 1.2384665056058994 1.1323420037125909 1.0445972925185831 2.0683358969791206 1.2454083250154255 1.1447554458173135 0.9973422834187269 1.917858977745839 1.5078373524264417 1.268254006564298 1.0 8.933073064850504 RGEGDAPFSEPGTT(ph)STQRPSS(ph)PETATK ddPTM_A549_PD325901_60min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGEGDAPFS(0.01)EPGT(0.421)T(0.487)S(0.034)T(0.038)QRPS(0.224)S(0.687)PET(0.094)AT(0.006)K 102.47 7.6178e-11 17370000.0 2588.3 2404.7 2296.8 2314.4 2635.9 1892.2 2137.1 2651.3 2317.2 2479.8 2934.9 True False 2851.0623105942486 2607.352508295385 2452.674659780396 2457.355231616233 2450.7634773613418 1876.7905505569095 2218.4285099659915 2598.4177415953873 2219.8161422800604 2323.2250047946854 2573.9259058639673 1.1076707002710933 1.0129866218585644 0.9528924877723424 0.9547109440943267 0.9521499712862618 0.729154847185449 0.8618851478637847 1.0095153616021433 0.8624242590755362 0.9025997988138935 1.0 11.32975480877969 -5.310953397657691 1.1540394020689944 0.9208165883056543 1.1863356447532094 0.4042451732016489 0.07373074592461483 1.3604078724205309 1.5486402066902103 0.012192231264948906 0.4247377165132128 4.88704797417264e-06 5.310953397657691 0.26551905644755514 RGEGDAPFSEPGTTST(ph)QRPS(ph)SPETATK ddPTM_A549_MK2206_60min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGEGDAPFS(0.005)EPGT(0.152)T(0.154)S(0.381)T(0.404)QRPS(0.496)S(0.375)PET(0.03)AT(0.003)K 62.666000000000004 0.00028948 8981700.0 950.85 1117.9 945.87 1120.8 1279.9 856.59 976.15 812.28 1662.2 1346.6 1645.1 True False 1111.3302339494458 1174.7963350630403 1080.008588940596 1395.3960503146238 1091.6284054732773 947.2337852415764 1153.503819509738 927.4231775031703 1285.7143539879655 1042.4021247456824 1236.5762675497788 0.8987154800823547 0.9500395292162992 0.8733861527850484 1.1284350888275896 0.8827829177380954 0.7660132335537041 0.9328206029664105 0.7499927031114857 1.0397372064527421 0.842974389934845 1.0 10.272135507343942 RGEGDAPFSEPGTTSTQRPS(ph)S(ph)PETATK ddPTM_A549_MK2206_60min_R1 3 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGEGDAPFSEPGT(0.07)T(0.29)S(0.31)T(0.321)QRPS(0.341)S(0.646)PET(0.02)AT(0.001)K;RGEGDAPFS(0.044)EPGT(0.19)T(0.199)S(0.204)T(0.204)QRPS(0.491)S(0.612)PET(0.045)AT(0.011)K;RGEGDAPFS(0.002)EPGT(0.043)T(0.194)S(0.209)T(0.226)QRPS(0.373)S(0.913)PET(0.036)AT(0.004)K 76.891 1.9688e-06 22034700.0 4262.0599999999995 4673.9 3789.32 3697.43 5248.0 4265.97 4250.3099999999995 3566.4 5553.2 5411.9 5954.1 True False 4981.391530637402 4911.781546158999 4326.702555577807 4603.300515983942 4476.026151983563 4717.392113878293 5022.536310096226 4071.9481216419313 4295.409066638172 4189.348031272215 4475.532645199768 1.1130276383929838 1.0974741858775467 0.9667458375526344 1.0285480815163335 1.0001102677207203 1.054040376386916 1.1222209082718113 0.9098242476254303 0.9597537113811944 0.9360557420501668 1.0 12.127843676281241 -8.264789179626606 24.999206110307227 0.975125990012857 1.0497469467429814 0.46855856355374415 0.0504538051940114 263.36025133541534 1965424.461307474 0.008332864224227233 0.010275530402811402 5.4351410652258215e-09 8.264789179626606 0.07462095673012437 RGEGDAPFSEPGTTSTQRPS(ph)S(ph)PETATK ddPTM_A549_PD325901_60min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGEGDAPFS(0.098)EPGT(0.145)T(0.153)S(0.162)T(0.172)QRPS(0.437)S(0.518)PET(0.297)AT(0.019)K 66.828 0.0002986 17516000.0 2539.9 2119.8 2427.0 2749.6 2925.3 2236.9 2564.9 3179.3 2845.6 3156.4 3286.4 True False 2797.748778224445 2298.4429854387477 2591.7108147365984 2919.436547205321 2719.8370197371423 2218.683428041832 2662.5086730671333 3115.886367387398 2726.009327840559 2957.104365325407 2882.193634206053 0.9707011857290185 0.797463070544839 0.8992146759253138 1.0129217248130962 0.9436690815835368 0.7697898578743494 0.9237785558431311 1.0810815520539165 0.9458106129609444 1.0259908738366184 1.0 11.492951547907108 -8.013794781640133 24.824038642566574 0.9826832351142787 0.8970048264313248 0.31670649797554584 0.07407598506487502 667.4665329948381 1201122.2551230646 0.011569424509908005 0.015265585678232616 9.687355073651561e-09 8.013794781640133 -0.08567840868295384 RGEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_A549_MK2206_60min_R1 3 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFSEPGT(0.006)T(0.008)S(0.037)T(0.037)QRPS(0.456)S(0.456)PET(0.001)ATK;RGEGDAPFSEPGTT(0.075)S(0.059)T(0.059)QRPS(0.4)S(0.4)PET(0.006)ATK;RGEGDAPFSEPGT(0.015)T(0.081)S(0.081)T(0.081)QRPS(0.371)S(0.371)PETATK 123.09 1.8335e-18 357331100.0 5704.900000000001 6181.900000000001 6216.3 6114.800000000001 8193.5 6002.599999999999 6005.400000000001 6016.299999999999 9405.9 9179.3 9346.1 True False 6667.747648586202 6496.532304970222 7097.8648138025565 7612.926274503801 6988.247003863814 6637.7911477965945 7096.503444843294 6869.128949146015 7275.478668135844 7105.689754699276 7025.205430762261 0.9491178178774946 0.9247462396648127 1.0103426702260023 1.0836588836488688 0.9947391678061667 0.9448536719980827 1.0101488867170816 0.977783356920381 1.0356250418354567 1.0114565082445257 1.0 12.778324697840297 -5.767926636125644 24.901194147730056 1.0119502485086227 0.9369320221304208 0.397994644050526 0.03318548688768732 91.82455943721425 352473.2123946001 0.004717018681358444 0.015190751390815355 1.7063706159819832e-06 5.767926636125644 -0.07501822637820188 RGEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_A549_PD325901_60min_R1 6 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.001)EPGT(0.004)T(0.004)S(0.023)T(0.023)QRPS(0.473)S(0.473)PETATK;RGEGDAPFS(0.013)EPGT(0.082)T(0.068)S(0.068)T(0.068)QRPS(0.351)S(0.351)PETATK;RGEGDAPFSEPGT(0.006)T(0.035)S(0.214)T(0.166)QRPS(0.287)S(0.287)PET(0.004)ATK;RGEGDAPFS(0.018)EPGT(0.067)T(0.067)S(0.067)T(0.067)QRPS(0.35)S(0.35)PET(0.007)AT(0.007)K;RGEGDAPFS(0.023)EPGT(0.088)T(0.088)S(0.088)T(0.088)QRPS(0.308)S(0.308)PET(0.004)AT(0.005)K;RGEGDAPFSEPGTT(0.003)S(0.019)T(0.019)QRPS(0.568)S(0.391)PETATK 186.85 4.2147e-58 264281600.0 9163.18 8873.58 9271.64 10394.120000000003 11293.3 9704.14 10553.380000000001 9605.28 10960.07 10215.569999999998 11965.279999999999 True False 10093.419288023415 9621.387728431719 9900.869245300551 11036.14118564074 10500.09756776996 9625.112701237367 10954.994650931125 9413.695155203617 10499.456372570105 9570.55716679992 10493.626414159256 0.9618618854587929 0.916879193969531 0.9435126480147144 1.0516994554665542 1.000616674670443 0.9172341687569526 1.0439665201106583 0.8970869348370868 1.0005555713707306 0.912035247784901 1.0 13.357225713862013 -2.0000000000000004 0.23703012546817193 0.9994386457267767 0.6478129993119336 0.0 0.054560827413957014 72.17109739713699 0.8619438978628291 0.024285759200510324 10.096313236428541 0.00999999999999999 2.0000000000000004 -0.35162564641484306 RGEGDAPFSEPGTTSTQRPSS(ph)PETATK ddPTM_A549_MK2206_60min_R1 6 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFSEPGTT(0.005)S(0.001)T(0.001)QRPS(0.38)S(0.612)PETATK;RGEGDAPFSEPGTTSTQRPS(0.25)S(0.75)PETATK;RGEGDAPFSEPGT(0.001)T(0.004)S(0.001)T(0.001)QRPS(0.085)S(0.907)PETATK;RGEGDAPFS(0.002)EPGT(0.012)T(0.012)S(0.002)T(0.002)QRPS(0.162)S(0.805)PET(0.002)ATK;RGEGDAPFSEPGTTST(0.015)QRPS(0.344)S(0.641)PETATK;RGEGDAPFSEPGTT(0.001)S(0.036)T(0.036)QRPS(0.195)S(0.732)PETATK 277.33 4.9360999999999986e-154 1597568000.0 19810.7 21836.600000000002 20643.699999999997 17560.6 25956.8 21184.199999999997 19872.7 20420.3 29590.000000000004 29462.200000000004 30591.899999999998 True False 23154.261834886955 22947.989668340266 23571.287076990466 21862.947788325284 22138.58910476505 23425.89798306611 23483.312353604637 23314.940059545974 22887.912245520314 22806.66855761344 22995.08693651212 1.0069221264009267 0.9979518551809833 1.0250575325968192 0.9507660418369978 0.9627530074527745 1.0187349170604758 1.0212317273877012 1.0139096287792668 0.9953392352336954 0.9918061462685968 1.0 14.489038031611189 -7.295607468574465 24.981229071429226 1.0023515897896866 0.9891181456007263 0.13981842939824496 0.0208392805472785 1320.3626605407717 965350.8163748805 0.003252336839337642 0.005199316092610568 5.0628205172442274e-08 7.295607468574465 -0.01323344418896033 RGEGDAPFSEPGTTSTQRPSS(ph)PETATK ddPTM_A549_PD325901_60min_R1 3 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFSEPGTTSTQRPS(0.478)S(0.521)PETATK;RGEGDAPFSEPGTTST(0.004)QRPS(0.325)S(0.672)PETATK;RGEGDAPFSEPGT(0.015)T(0.015)S(0.083)T(0.083)QRPS(0.02)S(0.784)PETATK 278.7 4.324099999999999e-154 2813150000.0 32345.1 30645.1 30038.0 30096.8 41684.0 29930.2 35146.0 33383.3 33555.5 36985.8 37291.5 True False 35628.750740795906 33227.670125987795 32076.55931316768 31955.81098120785 38756.25964199329 29686.458374526184 36483.50026262914 32717.443892807783 32145.279027394547 34650.51027596389 32704.881910295444 1.0894016018318058 1.0159850207417438 0.9807881098959123 0.9770960515576181 1.1850297991686949 0.9077072485982876 1.1155368291100354 1.000384101142661 0.9828893165113451 1.0594904568377592 1.0 14.99721838475535 -8.497526906715665 24.39715787256072 0.991905037254496 1.0356128965777163 0.009977014002122697 0.07354414743902696 1059.1491076805758 1019265.1553562524 0.010562361766896263 0.012739792370928506 3.180336644461244e-09 8.497526906715665 0.0437078593232203 RGEIIAK ddPTM_A549_MK2206_60min_R1 1 RGEIIAK 7 1 A0A087X0X3;P52272-2;P52272;M0R019;M0R2T0 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 77.282 0.017474 1991100.0 1137.5 1045.6 911.71 759.42 1435.4 821.93 1040.5 815.94 1023.9 1319.2 1665.5 False True 1329.4821907950723 1098.8165738813086 1041.0041872805257 945.4779340916588 1224.2545614628818 908.9060870470225 1229.5453815498463 931.6019937114509 791.9882848323167 1021.191803775809 1251.910384538421 1.0619627468664634 0.8777118453941428 0.8315325123406045 0.7552281263648565 0.9779091032256786 0.7260152949223565 0.9821353003659118 0.7441443135364135 0.6326237841092136 0.815706792105828 1.0 10.289915578235096 -5.252870382830477 2.41047530842611 0.8271376418420646 1.119539278007241 0.26410823432923025 0.1115705820519591 0.760773965369275 5.204733874926157 0.01970991185047251 0.464214651812486 5.5863689758975655e-06 5.252870382830477 0.29240163616517645 RGEIIAK ddPTM_A549_PD325901_60min_R1 1 RGEIIAK 7 1 A0A087X0X3;P52272-2;P52272;M0R019;M0R2T0 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 89.75200000000001 0.012745999999999999 2664300.0 1631.0 2056.4 1752.9 2094.1 1999.8 1672.2 1770.9 1971.4 1858.6 2209.0 2079.2 False True 1796.577919321259 2229.700044936427 1871.8623350439987 2223.447800953835 1859.3409469354722 1658.5821576161438 1838.2925685736625 1932.0788804666183 1780.489505455602 2069.5233630097023 1823.4715811347446 0.9852513951455445 1.2227775129617795 1.0265377066524615 1.21934875429766 1.0196709212097543 0.9095739000132975 1.0081278960375653 1.059560730452562 0.9764284367665358 1.134935901617858 1.0 10.832472000061113 -6.97883940500522 24.150941089183743 0.9900886549208686 1.1156301442815328 0.20617481042789432 0.08531980469317386 112.05169021479516 127885.34396792846 0.00927054356288749 0.017518286978806443 1.0499306040389927e-07 6.97883940500522 0.12554148936066423 RGEIQHR ddPTM_A549_PD325901_60min_R1 1 RGEIQHR 7 1 P33992;B1AHB1 P33992 MCM5 DNA replication licensing factor MCM5;DNA helicase 0 72.138 0.020191 5115100.0 677.51 797.68 584.99 576.27 773.91 586.28 541.59 642.99 767.45 685.52 624.02 False True 746.290316443499 864.9032930582033 624.6909392306399 611.8648890958722 719.5532314445597 581.5055300605143 562.2005038194199 630.1650600341035 735.1967453792649 642.236150208425 547.2694959886991 1.3636614536595872 1.5803974082196302 1.1414685887107063 1.118032146101026 1.3148060264981738 1.062557906703651 1.0272827335346846 1.1514711940881064 1.3433906891723535 1.173528133608395 1.0 9.096107634823179 -5.772163585265022 24.98598090152105 1.1550339497690387 1.4720294272803873 0.5587062719985213 0.11090875477613427 124.47682532810798 290017.03787793027 0.01923991723667416 0.060702368210530856 1.6898043148647953e-06 5.772163585265022 0.3169954775113486 RGFEGS(ph)CSQKESEEGNPVR ddPTM_A549_MK2206_60min_R1 1 RGFEGSCSQKESEEGNPVR 19 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RGFEGS(0.643)CS(0.357)QKESEEGNPVR 107.08 4.1719e-10 17736000.0 1509.3 2116.7 1833.8 1700.1 2112.3 2074.6 1706.0 1637.0 2426.1 3003.2 2877.4 True False 1764.0329411578045 2224.4309888433113 2093.860414643941 2116.6245763203888 1801.5834681468891 2294.132794991973 2015.9581171783166 1869.049763102243 1876.592223685599 2324.775034187016 2162.862167799972 0.8156011822760532 1.0284663636730795 0.9680970178389968 0.9786220351125677 0.832962680178289 1.0606930155542582 0.9320788662316453 0.864155742759794 0.8676430017703984 1.0748604644334496 1.0 11.07872601460953 -7.968858385912904 24.9986079145192 0.928720770691768 0.9522602458190959 0.0 0.08829448112145624 897.445352194681 720412.8051463121 0.012694595038106266 0.017539990294740005 1.0743396742860373e-08 7.968858385912904 0.023539475127327902 RGFEGS(ph)CSQKESEEGNPVR ddPTM_A549_PD325901_60min_R1 2 RGFEGSCSQKESEEGNPVR 19 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RGFEGS(0.846)CS(0.154)QKESEEGNPVR;RGFEGS(0.933)CS(0.067)QKESEEGNPVR 153.83 6.971500000000001e-23 43519000.0 10613.2 10651.7 10754.8 12576.6 11573.6 11156.1 10565.0 11573.9 10474.900000000001 11837.599999999999 11845.6 True False 11690.644250975112 11549.356141144397 11484.685401866154 13353.428018469038 10760.71026275247 11065.248420393173 10967.056856389829 11343.04948495109 10034.67638044598 11090.171915782548 10388.666295445237 1.125326766545645 1.1117265501355114 1.1055014258087634 1.2853842484404046 1.035812486100391 1.0651269475509646 1.05567515063971 1.091867729924513 0.9659253743520034 1.067526051986565 1.0 13.342722831438117 -7.8932597102269995 0.7933318194819234 0.9845806520942765 1.1418545750220168 0.3190524329454961 0.06501780646257369 0.33354708713325837 0.423379280870254 0.01226480616107831 0.020617031772862355 1.2786164565863585e-08 7.8932597102269995 0.15727392292774034 RGFEGSCS(ph)QKESEEGNPVR ddPTM_A549_MK2206_60min_R1 3 RGFEGSCSQKESEEGNPVR 19 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RGFEGS(0.047)CS(0.953)QKES(0.001)EEGNPVR;RGFEGS(0.245)CS(0.755)QKESEEGNPVR;RGFEGS(0.046)CS(0.954)QKESEEGNPVR 133.76 2.3308e-17 82007000.0 6856.599999999999 7031.1 5926.7 5543.2 8239.1 6918.200000000001 6852.9 6356.8 10120.7 9957.8 9899.0 True False 8013.8264522246045 7388.9529577437515 6767.19517912 6901.284248843704 7027.139304269771 7650.2793320705105 8097.983224625598 7257.895866883534 7828.377609436888 7708.326064007548 7440.805101498554 1.0770106652317295 0.9930313799316743 0.9094708283324218 0.9274916026833988 0.9444057744308513 1.0281520921075824 1.0883208354690934 0.9754180855270376 1.0520874425081068 1.0359532280257033 1.0 12.86124301528284 -7.273813617527426 23.762391473792217 1.0266038764165284 0.9657902542451567 0.26805939837405734 0.04869569157900127 422.0475360247659 810462.367480441 0.007509270467329 0.012062530127074976 5.3233666865582266e-08 7.273813617527426 -0.06081362217137165 RGFEGSCS(ph)QKESEEGNPVR ddPTM_A549_PD325901_60min_R1 1 RGFEGSCSQKESEEGNPVR 19 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RGFEGS(0.065)CS(0.934)QKES(0.001)EEGNPVR 58.876999999999995 0.00090356 72002000.0 9059.1 9040.5 9905.3 9834.7 10526.0 10480.0 9994.5 9612.5 10891.0 10739.0 10275.0 True False 9978.773163043064 9802.374662637516 10577.533223407676 10442.167082775746 9786.690072728661 10394.654354632921 10374.846166700254 9420.771146639636 10433.289144472707 10060.937707270794 9011.24013859152 1.1073695750608166 1.0877941894654304 1.1738154860737038 1.158793564723255 1.0860536310442113 1.1535209576889194 1.1513227932156593 1.0454466867766912 1.1578083575634748 1.1164875813467494 1.0 13.137509949932682 -10.888750222943825 0.8853537550757821 0.9912852419843423 1.1269734800249847 0.042627918607230364 0.05079896232721477 0.3760179329507013 0.46471058450800745 0.03604941670444021 0.006673076444990192 1.2919621099269655e-11 10.888750222943825 0.13568823804064234 RGGGDEESGEHTQVPADS(ph)PDSQEEQKGESSASSPEEPEEITCLEK ddPTM_A549_MK2206_60min_R1 1 RGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEK 45 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RGGGDEES(0.197)GEHT(0.228)QVPADS(0.265)PDS(0.085)QEEQKGES(0.085)S(0.085)AS(0.028)S(0.028)PEEPEEITCLEK 66.307 2.1697e-05 17245000.0 917.48 695.78 780.03 534.67 1167.1 1047.9 1110.4 835.26 1350.6 1433.0 1454.7 True False 1072.3281937676159 731.192230083337 890.6499832232055 665.6641740022484 995.4211360480217 1158.7880824602762 1312.1453067495909 953.6606628764696 1044.6912564650138 1109.2843047382776 1093.4578423224511 0.9806763025175649 0.6686972298175853 0.8145261287179654 0.6087698567220572 0.910342491059185 1.0597464644810328 1.1999962467347238 0.8721512855501963 0.9554014942598431 1.0144737746653423 1.0 10.09468188379087 -6.98928366738113 23.354057299266795 0.9927029137892894 0.7637713906863561 0.49723784967268747 0.11544578745520219 63.932339206774635 139324.82316958104 0.015737098385233614 0.029712841123742107 1.0249822216823204e-07 6.98928366738113 -0.2289315231029333 RGGGDEESGEHTQVPADS(ph)PDSQEEQKGESSASSPEEPEEITCLEK ddPTM_A549_PD325901_60min_R1 1 RGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEK 45 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RGGGDEES(0.17)GEHT(0.17)QVPADS(0.439)PDS(0.215)QEEQKGES(0.001)S(0.001)AS(0.002)S(0.002)PEEPEEITCLEK 91.646 4.8007e-11 13956000.0 806.53 850.13 1019.4 825.33 1068.7 1118.0 969.06 1076.3 1002.7 848.81 1006.4 True False 888.4083318639949 921.773438631494 1088.5826141501807 876.3087596395729 993.6381988148506 1108.8953786717188 1005.9381085899793 1054.8323521589843 960.5600059831767 795.2159917411789 882.6191800952321 1.0065590595574165 1.044361440833449 1.23335481337798 0.9928503474681138 1.1257836009270044 1.2563690022599239 1.139719293751855 1.1951160545198791 1.0883062906921364 0.9009729333724397 1.0 9.785647288468201 -9.825387252773462 1.0252675883050206 1.0136925330516264 1.1240691331087718 0.3095385387147229 0.0887005122190814 0.49159784281690944 1.0582167556630988 0.02655070394147277 0.015987956701505386 1.4949020836487313e-10 9.825387252773462 0.11037660005714534 RGGGSGGGEES(ph)EGEEVDED ddPTM_A549_MK2206_60min_R1 5 RGGGSGGGEESEGEEVDED 19 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 RGGGSGGGEES(1)EGEEVDED;RGGGS(0.004)GGGEES(0.996)EGEEVDED;RGGGS(0.412)GGGEES(0.588)EGEEVDED;RGGGS(0.015)GGGEES(0.985)EGEEVDED;RGGGS(0.01)GGGEES(0.99)EGEEVDED 111.33 3.639e-10 340893600.0 1814.98 1467.88 1867.11 1406.75 1956.8200000000002 1753.4099999999999 1966.17 1416.4299999999998 2144.8900000000003 2771.29 2907.7799999999997 True False 2121.304251999332 1542.5888221775974 2131.894273522657 1751.4038131514064 1668.974370183779 1938.954682380641 2323.397638483289 1617.213290134949 1659.0758396855058 2145.253664255505 2185.697975354627 0.9705385995314163 0.7057648584440466 0.9753837435736104 0.8013018417456526 0.7635887432768427 0.8871100692976795 1.0630003160003478 0.7399070266661879 0.7590599700383227 0.9814959287352774 1.0 11.093878344609802 RGGGSGGGEES(ph)EGEEVDED ddPTM_A549_PD325901_60min_R1 5 RGGGSGGGEESEGEEVDED 19 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 RGGGSGGGEES(1)EGEEVDED;RGGGSGGGEES(1)EGEEVDED;RGGGS(0.301)GGGEES(0.699)EGEEVDED;RGGGS(0.181)GGGEES(0.819)EGEEVDED;RGGGS(0.003)GGGEES(0.997)EGEEVDED 147.92 6.119800000000001e-21 493047100.0 2877.2499999999995 2304.1200000000003 2653.1 3083.48 3687.43 2556.5299999999997 3286.3199999999997 3754.05 2965.31 3815.17 2882.13 True False 3169.346301880499 2498.296278709843 2833.15532038635 3273.939556508825 3428.437637742907 2535.7104672948212 3411.382705943306 3679.172527754746 2840.6883328432987 3574.2795150990146 2527.6462813273783 1.2538725553862449 0.9883884059117155 1.1208670063196244 1.295252259263719 1.3563755589814899 1.003190393381786 1.3496282019934525 1.4555725438856304 1.1238472541939406 1.4140742482456854 1.0 11.303578871642513 -9.311625458605834 2.103821768479726 1.0400606404650208 1.2197636806864776 0.0 0.17980387694226055 0.3086124940307021 2.800208368084806 0.03009487977892071 0.026880864284841054 4.879491225746817e-10 9.311625458605834 0.17970304022145678 RGGHQNNYKPY ddPTM_A549_MK2206_60min_R1 2 RGGHQNNYKPY 11 2 Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 0 ; 51.927 0.0078894 4375000.0 1096.85 1139.9499999999998 964.27 901.1199999999999 1062.66 970.04 917.2 800.88 1474.67 1361.1599999999999 1500.8000000000002 False True 1281.9714645921538 1197.9685858798746 1101.017985619323 1121.8944404528143 906.3441216971904 1072.6889889395618 1083.8433675708977 914.4071925921355 1140.659599564091 1053.6730106333237 1128.1099400271767 1.1363887677128972 1.0619253880973827 0.9759846505676557 0.9944903423382542 0.8034182569788865 0.9508727393304595 0.9607604091714567 0.8105656728546395 1.01112450045127 0.934016245444961 1.0 10.13969195718876 -5.536580596998355 2.1185165503664103 0.9695334019571776 1.1433905579148564 0.3848800323655931 0.07257591544943881 0.38787800373178083 2.7986284921465834 0.010996475792556928 0.10269361178687222 2.9068284559539626e-06 5.536580596998355 0.1738571559576788 RGGHQNNYKPY ddPTM_A549_PD325901_60min_R1 1 RGGHQNNYKPY 11 2 Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 0 36.585 0.047402 2613800.0 372.55 355.77 468.7 478.79 603.97 415.81 494.42 490.62 498.19 589.04 525.3 False True 410.3710017431856 385.7519864749236 500.5088005220615 508.36377088901526 561.5492307833866 412.423781221366 513.2354236570055 480.83419921605594 477.2528068023926 551.8479138738046 460.69143015105885 0.8907719460043496 0.8373326726491029 1.0864295877132915 1.103479981649159 1.2189270171560538 0.8952278124343097 1.1140546362859793 1.0437229081044386 1.0359489575178409 1.197868850507716 1.0 8.847656950743627 -5.757560618752145 24.999999999160355 1.040133659260632 0.8640522526629625 0.40113020496284335 0.09171821975396971 65.85746995499721 424456.22869262286 0.010542146394249701 0.03797059503182757 1.747589317165078e-06 5.757560618752145 -0.17608140659766958 RGGIPAS(ph)PIDPFQSR ddPTM_A549_MK2206_60min_R1 3 RGGIPASPIDPFQSR 15 1 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 RGGIPAS(1)PIDPFQSR;RGGIPAS(1)PIDPFQSR;RGGIPAS(1)PIDPFQSR 98.391 5.1204999999999995e-06 142798600.0 1164.11 1320.15 1220.97 1187.2 1950.37 1290.51 1076.57 1460.15 1925.6399999999999 1489.68 1967.1399999999999 True False 1360.5833082430345 1387.339996183445 1394.1219055882934 1478.064053295433 1663.4731566395164 1427.0709116287917 1272.168833652203 1667.1307340218343 1489.4856146151997 1153.1602533723074 1478.644847697934 0.9201555805380132 0.938250992686554 0.942837563569621 0.9996072116956244 1.1249984465365954 0.9651208089965373 0.8603613204569113 1.1274720475422813 1.0073315556025122 0.7798764220952952 1.0 10.530059861106311 -6.248432296300895 4.5287225003384455 1.0080403063745094 0.9328217645121092 0.004367101203752277 0.09721412901217764 0.25323424807149897 13.808825750315501 0.009245967471066763 0.024273226402693696 5.643749168845937e-07 6.248432296300895 -0.07521854186240018 RGGIPAS(ph)PIDPFQSR ddPTM_A549_PD325901_60min_R1 3 RGGIPASPIDPFQSR 15 1 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 RGGIPAS(1)PIDPFQSR;RGGIPAS(1)PIDPFQSR;RGGIPAS(1)PIDPFQSR 90.581 1.3252000000000001e-05 136650000.0 1230.03 1578.0 1367.4299999999998 1756.69 2122.7799999999997 1946.61 1357.5 1904.06 2326.3 1802.48 1881.6999999999998 True False 1354.9017400997723 1710.9835979914812 1460.232022824584 1865.196751567543 1973.6832559934396 1930.757453556489 1409.1604053525027 1866.0820295938254 2228.533700926163 1688.6711051868385 1650.262829079092 0.8210217889085327 1.0367946049819674 0.884848156968698 1.1302422369946927 1.1959811620400056 1.1699696675795113 0.8539005911796891 1.1307786836810525 1.350411377907462 1.0232740357662784 1.0 10.68848009823147 -5.60101426251484 0.7108979389628465 1.1493363837206245 0.7553262349929273 0.22691258843785878 0.1352454779408462 2.090534782524113 0.9623889526855771 0.026667367090815994 0.5972260263734026 2.506026952116514e-06 5.60101426251484 -0.39401014872769724 RGGPISFSS(ph)SR ddPTM_A549_PD325901_60min_R1 1 RGGPISFSSSR 11 1 P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35580-2;P35580-5 MYH10 Myosin-10 1 RGGPISFS(0.107)S(0.446)S(0.446)R 74.475 0.00058773 5347200.0 1105.4 896.49 843.44 1033.3 1456.6 939.65 945.72 875.42 1015.8 1072.0 1122.6 True False 1217.6193942475304 972.0403585319291 900.6809104167437 1097.1245942054334 1354.2934409972029 931.9978019399643 981.7098921178409 857.9590613462951 973.1094585396547 1004.3137370513352 984.5273167477226 1.23675531753634 0.987316798626733 0.9148358761563303 1.1143668393373416 1.375577313051061 0.9466449392371522 0.9971382971483324 0.871442616930598 0.988402700449404 1.0200973807095317 1.0 9.943287425550853 RGGS(ph)GYHSR ddPTM_A549_MK2206_60min_R1 2 RGGSGYHSR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGGS(0.992)GYHS(0.008)R;RGGS(0.999)GYHS(0.001)R 63.662 0.0027711 46092000.0 1431.94 1283.3400000000001 1079.23 827.6800000000001 1779.4899999999998 1435.37 1264.76 1444.1 1614.12 2272.4 2308.3999999999996 True False 1673.616464428216 1348.6565244116666 1232.2810422598868 1030.4616371559675 1517.7293782761494 1587.259900678507 1494.5505206813878 1648.8055973707699 1248.5243972199823 1759.0632617496585 1735.1605714010766 0.9645311748161923 0.777251711824386 0.7101827130989188 0.5938710538609742 0.8746910247336016 0.9147625452305285 0.8613326889249188 0.9502322865943303 0.7195440109683026 1.013775491872364 1.0 10.760853460344604 -6.910146142218848 24.90006091387643 0.8746639659693917 0.7558422572192303 0.24810287911806506 0.1123909280922777 27.400306480078672 7585.431219868567 0.018345611568201088 0.034669949725583314 1.229854848996622e-07 6.910146142218848 -0.1188217087501614 RGGS(ph)GYHSR ddPTM_A549_PD325901_60min_R1 2 RGGSGYHSR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGGS(0.996)GYHS(0.004)R;RGGS(0.997)GYHS(0.003)R 73.881 0.00091895 62919000.0 2092.7 2251.3 1986.27 1801.49 2387.5 1858.28 1531.24 1911.74 2296.9 2802.5 2565.3 True False 2305.1493634356852 2441.024951938038 2121.0702266118105 1912.7639458193614 2219.8102364278616 1843.1467837907705 1589.5121761266794 1873.6088459689825 2200.3692806849112 2625.5496717223587 2249.7843627765287 1.0246090254582572 1.0850039640801368 0.9427882341550867 0.8501987912560474 0.9866768891967606 0.819254864726718 0.7065175678281509 0.8327948566842662 0.9780356362550975 1.167022811236045 1.0 11.135571013365935 -5.773363928856118 22.992148953314604 0.9369129402739634 1.0548064084399835 0.1546126857044655 0.11608841582181524 105.98595340357136 204360.54074682214 0.015258198482312003 0.048100937672884266 1.6851403244642307e-06 5.773363928856118 0.11789346816602009 RGGS(ph)TVPK ddPTM_A549_MK2206_60min_R1 1 RGGSTVPK 8 1 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 RGGS(0.845)T(0.155)VPK 47.228 0.015891 8992700.0 3426.0 3417.4 2865.4 2898.4 4005.8 3348.8 3285.3 2610.2 4602.5 5388.9 5143.3 True False 4004.225042341906 3591.3310631044205 3271.7568066968875 3608.5081301141186 3416.552126451174 3703.1677932464677 3882.1964843879964 2980.203843402245 3560.0410986822344 4171.543747246406 3866.0766621413777 1.0357334818404789 0.9289342599624554 0.846273132329636 0.9333772828279626 0.8837259126048429 0.9578619662434018 1.0041695557681183 0.7708599967988071 0.9208407928233804 1.0790121644757644 1.0 11.916654530331932 -10.406287966289899 1.0237836077205829 0.9950563142589541 0.9183744568067116 0.24214538171657018 0.0731091102818502 0.6687919465664812 1.3587045799453337 0.03136081487798473 0.012069762396221937 3.923846718404311e-11 10.406287966289899 -0.07668185745224254 RGGST(ph)VPK ddPTM_A549_PD325901_60min_R1 2 RGGSTVPK 8 1 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 1 RGGS(0.468)T(0.532)VPK;RGGS(0.394)T(0.606)VPK 62.303000000000004 0.0064381 18990500.0 4204.5 4206.8 4941.9 4602.7 5411.5 4559.9 4018.9 4809.799999999999 5234.299999999999 5313.4 5868.6 True False 4631.337744810694 4561.321799765887 5277.287052058836 4886.99832550987 5031.414908661518 4522.765686230029 4171.841438726466 4713.864765784896 5014.32057376857 4977.911017209485 5146.799404120509 0.8998481155303744 0.8862443319850603 1.0253531637222657 0.9495218176945766 0.9775813109470296 0.878753052355046 0.8105700477439444 0.9158827449173544 0.974259958481017 0.9671857452272546 1.0 12.329459839438877 -8.856574472759128 3.859758026596881 0.9890220327130578 0.9186443862680082 0.21413123970928738 0.05319946860430089 0.24281199748564547 6.630882500135602 0.010104707139377635 0.010696191882866055 1.3913151918461782e-09 8.856574472759128 -0.07037764644504962 RGGT(ph)LNRK ddPTM_A549_PD325901_60min_R1 1 RGGTLNRK 8 2 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7 Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 RGGT(1)LNRK 41.54 0.030396 10618000.0 1038.4 1150.1 868.64 815.2 813.15 743.9 758.91 865.65 805.32 1084.0 1231.3 True False 1143.8176035703236 1247.0229632763005 927.5911339566544 865.5530525464721 756.037149215211 737.8419250392587 787.7907353414862 848.3839316607123 771.4752009757378 1015.5560550034021 1079.8579058537953 1.0592297351066373 1.1548028277760631 0.858993696233811 0.8015434696124377 0.7001265121242468 0.6832768654463665 0.7295318495803532 0.7856440435928772 0.714422885449699 0.9404534147485334 1.0 10.076625771118477 -5.823276529205755 5.546300098585259 0.8195662161590299 1.1067891947462465 0.586861557357 0.09815745051782448 0.12841570241527553 7.64959707018918 0.017892390783594527 0.05888000598385805 1.5021851721021765e-06 5.823276529205755 0.28722297858721657 RGHHDDS(ph)DEEASPEK ddPTM_A549_MK2206_60min_R1 3 RGHHDDSDEEASPEK 15 1 Q5VT06;H0Y6Q4 Q5VT06 CEP350 Centrosome-associated protein 350 1 RGHHDDS(0.994)DEEAS(0.006)PEK;RGHHDDS(1)DEEASPEK;RGHHDDS(1)DEEASPEK 86.8 9.056000000000001e-06 23977100.0 3256.66 2023.3000000000002 1957.1600000000003 820.12 2408.96 1834.85 1541.21 1939.63 2270.28 3704.0 3542.5 True False 3806.3045903074103 2126.2773277869646 2234.7147175943614 1021.0494368165862 2054.605175130017 2029.0126091251443 1821.2279072546257 2214.57849236775 1756.0652048921895 2867.2638274602764 2662.7994819737974 1.4294371829627934 0.7985119954322898 0.8392350729833706 0.38344961523716925 0.7715959046255496 0.7619847543387461 0.6839523289619399 0.8316730220805797 0.6594808271445614 1.0767854834247301 1.0 11.378728077366127 -5.260892891750149 6.301978745393512 0.7863157093468178 1.4440541481693692 0.5409426089845264 0.1717740891688205 0.07494425993033887 16.25287657870961 0.023765251302549167 0.2088861387504283 5.484122008741961e-06 5.260892891750149 0.6577384388225513 RGHHDDS(ph)DEEASPEK ddPTM_A549_PD325901_60min_R1 4 RGHHDDSDEEASPEK 15 1 Q5VT06;H0Y6Q4 Q5VT06 CEP350 Centrosome-associated protein 350 1 RGHHDDS(1)DEEASPEK;RGHHDDS(0.998)DEEAS(0.002)PEK;RGHHDDS(1)DEEASPEK;RGHHDDS(1)DEEASPEK 106.75 9.955200000000002e-07 36450700.0 4795.84 5307.57 5242.3 4869.73 5573.96 5273.65 4228.1900000000005 3374.32 5470.15 5971.5 6467.6 True False 5282.71014628919 5754.857550818536 5598.074002510785 5170.522162140739 5182.46427871809 5230.703142873085 4389.096084204347 3307.016540497168 5240.258618459039 5594.458470897432 5672.126201494363 0.9313456645053879 1.0145855974259488 0.9869445431302166 0.9115668408045166 0.9136722446959541 0.9221767917461037 0.77380085144227 0.5830294360562553 0.923861429084292 0.9863071222610545 1.0 12.469673916718461 -6.263770067597641 22.18635570086513 0.9131236320963647 0.9813213042400444 0.07392545518568128 0.1148564426501369 113.67858078828058 1082186.4793222093 0.01830289803423259 0.044570114408126534 5.447910100670384e-07 6.263770067597641 0.06819767214367967 RGHREEEQEDLTKDMDEPS(ph)PVPNVEEVTLPK ddPTM_A549_PD325901_60min_R1 3 RGHREEEQEDLTKDMDEPSPVPNVEEVTLPK 31 3 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 RGHREEEQEDLT(0.001)KDMDEPS(0.999)PVPNVEEVTLPK;RGHREEEQEDLT(0.024)KDMDEPS(0.975)PVPNVEEVTLPK;RGHREEEQEDLT(0.013)KDMDEPS(0.986)PVPNVEEVTLPK 124.79 3.6288e-22 36458000.0 3302.1 3190.91 3496.5499999999997 3357.5699999999997 3234.96 3334.7 2926.95 2524.96 4288.3 3853.1499999999996 4295.0 True False 3637.3267611224624 3459.8191841996177 3733.846909463227 3564.959473305271 3007.7475696061456 3307.54330881626 3038.3366839384967 2474.597692007199 4108.077663964953 3609.8614514173064 3766.742228248235 0.9656426006124771 0.9185176405895565 0.991266904717208 0.9464304317323022 0.7985010354703598 0.8780912280144186 0.8066218763664932 0.656959659583087 1.0906182093260626 0.9583510717419367 1.0 11.879101592502101 RGHT(ph)ASESDEQQWPEEK ddPTM_A549_MK2206_60min_R1 1 RGHTASESDEQQWPEEK 17 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 RGHT(0.333)AS(0.333)ES(0.333)DEQQWPEEK 61.181000000000004 0.0013174 6578400.0 670.18 629.38 677.66 810.49 990.82 730.07 685.62 781.96 1069.1 845.43 972.86 True False 783.2899996721237 661.4127537006675 773.7623778970518 1009.0600863842793 845.0716905313174 807.3255228187555 810.1882791909712 892.8052246520655 826.9505570018845 654.4467758233648 731.2720124299303 1.0711335677531864 0.9044688466920418 1.0581047335941807 1.379869691759831 1.1556188069105013 1.1040016698247597 1.1079164324897537 1.2208934698394642 1.1308385155532286 0.8949430098503505 1.0 9.514264337386194 -10.543254769299944 0.9335830586547924 1.0028348146506254 1.1262691730277918 0.23438140704234456 0.11483371758033634 0.879560978867803 1.416841608160315 0.06869055544369446 0.02116445678840264 2.862498255666648e-11 10.543254769299944 0.12343435837716643 RGHVT(ph)PNLS(ph)R ddPTM_A549_MK2206_60min_R1 1 RGHVTPNLSR 10 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 2 RGHVT(1)PNLS(1)R 41.825 0.035429 8921500.0 1332.0 1302.2 1289.3 1131.7 1757.2 1649.1 1209.6 1426.8 2211.0 1931.3 2359.0 True False 1556.8090357266237 1368.4764178540934 1472.142127058804 1408.966550803944 1498.7182077487653 1823.6066674160136 1429.368662683992 1629.0532693917414 1710.212030241482 1495.0179886538976 1773.1951949121203 0.8779682237993992 0.7717573461628487 0.8302200069585477 0.794591906659082 0.8452076861301453 1.028429736697088 0.8060977532452831 0.9187106270454773 0.9644804109263561 0.8431209338619885 1.0 10.792135642800208 -7.870563070276622 0.42113640867345475 0.999676855237182 0.7994251663252904 0.14192561776206103 0.07628033209245713 0.5858237128962276 0.22871099351665491 0.021601050837532245 0.04311963892090946 1.3472150622625572e-08 7.870563070276622 -0.2002516889118916 RGHVT(ph)PNLSR ddPTM_A549_MK2206_60min_R1 2 RGHVTPNLSR 10 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 RGHVT(0.97)PNLS(0.03)R;RGHVT(1)PNLSR 89.507 0.00042077 64938000.0 2252.27 1788.79 1563.54 1848.6100000000001 2344.6000000000004 1871.46 1757.5 2064.02 3029.8 3006.3999999999996 2739.9 True False 2632.398113285288 1879.831770460163 1785.2734827747784 2301.5195329872554 1999.7124458728392 2069.4966550253916 2076.8150005515186 2356.6011557961488 2343.555137596399 2327.252151964519 2059.5072126069167 1.2781689217554175 0.9127580418039317 0.8668449772093713 1.1175098192902178 0.9709664688872881 1.0048504041924817 1.008403849153164 1.1442548690145986 1.1379203351416942 1.130004370811934 1.0 11.008083463344105 RGHVT(ph)PNLSR ddPTM_A549_PD325901_60min_R1 2 RGHVTPNLSR 10 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 RGHVT(0.999)PNLS(0.001)R;RGHVT(0.993)PNLS(0.007)R 114.7 5.7892e-05 78000000.0 4432.4 4848.0 4924.7 5049.8 4749.799999999999 4776.6 4999.4 3784.1 5258.0 5542.200000000001 6381.4 True False 4882.373985039578 5256.557974057482 5258.919756626832 5361.714677072097 4416.190433920441 4737.700953276684 5189.654902776649 3708.6231569309766 5037.02454518754 5192.264546162233 5596.528255027539 0.8723933414708639 0.9392533611056729 0.9396753696191166 0.9580429925026286 0.7890946373679499 0.8465428453828777 0.9272989729149704 0.662664957261567 0.9000266443151825 0.9277652697451956 1.0 12.450316429248328 -9.999739782611368 1.1519762457928326 0.9852930769098833 0.8724845928034577 0.14484598390181824 0.08296302675210286 0.4480261677736311 1.1967881484050114 0.02692262880719922 0.01535283455585239 1.0005993522198096e-10 9.999739782611368 -0.11280848410642563 RGILT(ph)LK ddPTM_A549_MK2206_60min_R1 1 RGILTLK 7 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;Q6S8J3;A5A3E0;P0CG38;P0CG39;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 1 RGILT(1)LK 66.692 0.01487 5986500.0 767.13 591.69 584.37 528.83 1085.5 847.28 692.96 736.36 1170.9 1051.1 964.38 True False 896.6027894721963 621.8044936876738 667.2424531058354 658.3933737400813 925.824387953155 936.9386072210542 818.8618621804727 840.7412850079224 905.6930195430808 813.6557799793462 724.8978304660236 1.2368678064545822 0.8577822522767478 0.9204641330998016 0.9082567860864091 1.2771791403458324 1.2925112586124219 1.1296238280283462 1.1598065957342225 1.2494078220110374 1.1224420129058212 1.0 9.501633860947816 -6.746977020556327 24.993070320398644 1.1470893321542208 0.9677399354952525 0.35861434760315436 0.1211848055535809 248.17481424442548 428879.86649670947 0.019622501302591543 0.04070363909612867 1.790700601301697e-07 6.746977020556327 -0.17934939665896832 RGILT(ph)LK ddPTM_A549_PD325901_60min_R1 2 RGILTLK 7 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;Q6S8J3;A5A3E0;P0CG38;P0CG39;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 1 RGILT(1)LK;RGILT(1)LK 104.2 0.006275 17775200.0 1978.81 2351.6 2374.5299999999997 2014.5900000000001 2189.1800000000003 2368.1400000000003 2744.8999999999996 2545.2 2537.8 2995.2 2446.27 True False 2179.6973344770704 2549.777584940918 2535.6798850088567 2139.0266488341463 2035.4195490610052 2348.8546529943137 2849.3586715669135 2494.4339893292245 2431.1450914372276 2806.0825608359683 2145.3942981831924 1.015989152354384 1.1884890283805518 1.1819178820211156 0.9970319444987625 0.9487391435619464 1.094835879345545 1.3281282018787255 1.1626925602634504 1.1331926692897527 1.3079565668708422 1.0 11.06702710709841 -10.646581043260689 1.0233201342545526 1.003055233965954 1.1187576968905257 0.0 0.1348935028314987 0.7974017315858895 1.5426090165983166 0.06263016858032189 0.01863641396195161 2.256414888872395e-11 10.646581043260689 0.11570246292457176 RGILTLK ddPTM_A549_MK2206_60min_R1 2 RGILTLK 7 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;Q6S8J3;A5A3E0;P0CG38;P0CG39;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ; 114.78 0.0074134 45812000.0 1701.8899999999999 2323.91 1862.8200000000002 1905.6799999999998 3132.3999999999996 2149.7 1937.49 2201.88 3065.2 3130.2 3202.4 False True 1989.127424784373 2442.1870927778414 2126.995887014412 2372.5716855492255 2671.6281094651886 2377.179827144629 2289.50685372322 2514.00323297469 2370.937094118582 2423.085645981685 2407.1556982562834 0.8263393291199546 1.014553023947281 0.8836137556682286 0.985632831007936 1.109869258311993 0.9875471822893017 0.9511253698220323 1.044387463094226 0.9849537758758449 1.0066177471349034 1.0 11.23311374506092 -4.274306855847071 1.0114510666427974 0.9978105478333559 3.4166505534467594e-11 0.4410174792782655 0.05388731078105159 8.09643730978778 1.418271162398264 0.007539221048044591 14.059743293882283 5.317324247417639e-05 4.274306855847071 -0.9978105477991893 RGILTLK ddPTM_A549_PD325901_60min_R1 2 RGILTLK 7 1 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;C9JUM1;C9JZR7;I3L3R2;K7EM38;J3KT65;C9JTX5;Q6S8J3;A5A3E0;P0CG38;P0CG39;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P68133 ACTB;ACTG1;POTEE;POTEF;POTEI;POTEJ;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ; 131.03 0.005746800000000001 93344000.0 5360.200000000001 5391.3 5379.3 4827.3 5928.299999999999 5890.5 6402.700000000001 6333.1 5839.1 5872.1 5824.2 False True 5904.3635580293185 5845.643771768996 5744.371646358707 5125.47135740626 5511.916659524729 5842.5297209890505 6646.358252191872 6206.781352279159 5593.702933017224 5501.334603861148 5107.860322645716 1.1559367690326814 1.1444408034911044 1.1246140817302728 1.0034478301378886 1.079104813240023 1.1438311449289589 1.3012020361491132 1.2151431245606645 1.0951166593607744 1.077033093381775 1.0 12.31850335892325 -9.705758920716228 1.173888886763969 1.0186453653638625 1.1406455018613024 0.21273366474284816 0.07396992237249692 0.3817954611261892 1.0754691649548747 0.022599190101527247 0.015411538409438067 1.9689789775881363e-10 9.705758920716228 0.1220001364974399 RGKS(ph)GFNSK ddPTM_A549_MK2206_60min_R1 2 RGKSGFNSK 9 2 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;A0A0G2JNQ3;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 1 RGKS(1)GFNSK;RGKS(1)GFNSK 58.674 0.0035776 29693000.0 6395.0 8167.200000000001 7123.4 6788.0 10408.5 7112.700000000001 6578.5 6221.299999999999 11796.5 12189.6 11238.6 True False 7474.319657261082 8582.875595068304 8133.605233763039 8451.060304724897 8877.423438056578 7865.361192971857 7773.7282965167315 7103.188326932185 9124.61158513959 9435.960893955133 8447.745450419401 0.8847709369474441 1.0159960009971885 0.9628137213058703 1.0003923951455393 1.050863036789993 0.9310603922826971 0.9202133684237365 0.8408383477723677 1.0801238790506624 1.1169797846461709 1.0 13.044350648365274 RGKS(ph)GFNSK ddPTM_A549_PD325901_60min_R1 2 RGKSGFNSK 9 2 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;A0A0G2JNQ3;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 1 RGKS(1)GFNSK;RGKS(1)GFNSK 60.301 0.002675 50015000.0 9541.099999999999 10148.7 11523.5 11455.3 12712.2 12896.0 13444.5 13691.9 13965.0 12691.400000000001 14514.6 True False 10509.705448213415 11003.96656586575 12305.55400643478 12162.867864126094 11819.338926709226 12790.979251655175 13956.137804612688 13418.804313412245 13378.09961459566 11890.062838072128 12729.396215630226 0.8256248191338967 0.8644531429035222 0.9667036674783509 0.9554944836418477 0.9285074269427206 1.0048378599410184 1.096370760105351 1.054158742968147 1.0509610501532587 0.9340633787070362 1.0 13.63587637008689 -5.6435976704761 0.6082292372762659 1.030632660905296 0.7466412218853484 0.6445501651486956 0.04650467443081914 0.8972855704500695 0.293373839185553 0.007311804538072194 0.16168873890209792 2.2719686243764436e-06 5.6435976704761 -0.2839914390199476 RGLAPNT(ph)PGK ddPTM_A549_MK2206_60min_R1 2 RGLAPNTPGK 10 1 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 RGLAPNT(1)PGK;RGLAPNT(1)PGK 96.745 0.00032723 111438000.0 10905.900000000001 11061.2 10431.099999999999 8986.2 14083.2 10763.2 9783.1 9864.3 13294.8 15628.9 15595.0 True False 12746.549296344594 11624.16783379488 11910.386831275171 11187.819403405854 12011.57993590223 11902.15467996607 11560.562635502443 11262.594733151784 10283.54902743304 12098.320635257542 11722.331099895944 1.0873732526167719 0.9916259602919819 1.0160425200223953 0.954402269315287 1.0246750269670213 1.015340257713052 0.9861999748160213 0.9607811481499408 0.8772614371491626 1.0320746387520938 1.0 13.51697187182226 -8.171775043484395 2.6950914937049113 0.941459681748404 1.011041169594414 0.09757260437408721 0.048302809370453156 0.2809432408557449 3.992850662785299 0.008525175176383916 0.011175467556934302 6.733253360523053e-09 8.171775043484395 0.06958148784600993 RGLAPNT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 RGLAPNTPGK 10 1 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 RGLAPNT(1)PGK;RGLAPNT(1)PGK 87.21600000000001 0.00045038 167312000.0 9269.7 9485.0 10026.4 9000.7 11409.9 10380.599999999999 9620.2 11834.099999999999 10508.2 11568.9 11922.2 True False 10210.753120007537 10284.334237610396 10706.85179764113 9556.652796927174 10608.507986018121 10296.063835276962 9986.301975375434 11598.059591828141 10066.57689724985 10838.437679639177 10455.844981052647 0.9765593444155639 0.9835966635166215 1.0240063636218153 0.9140010027161911 1.0146007333928648 0.9847184855872262 0.9550927728435066 1.1092417315717034 0.9627702892967329 1.0365912749548063 1.0 13.352022036475955 RGLAPNT(ph)PGKAR ddPTM_A549_MK2206_60min_R1 2 RGLAPNTPGKAR 12 2 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 RGLAPNT(1)PGKAR;RGLAPNT(1)PGKAR 52.265 0.008705200000000001 7106300.0 959.32 1286.95 1018.25 772.37 1344.56 1341.8899999999999 1098.79 779.29 1761.63 2228.5 1920.75 True False 1121.2297628778276 1352.4502579921093 1162.6531613104994 961.6006846730066 1146.7770051278612 1483.8879091255073 1298.4259200318643 889.7567439755336 1362.6236177450473 1725.0803022395323 1443.7747649968014 0.7765960384273038 0.9367460152242691 0.805287077664829 0.6660323396600834 0.7942907944719493 1.0277835193558011 0.89932720221408 0.616271156379094 0.9437923773020552 1.1948403200158122 1.0 10.49562997787937 -8.976086780752906 24.830021851395056 0.9752026713997932 0.8205166382404225 0.36171010894455 0.1279083145102453 144.18467009578498 149714.25333486072 0.019554381984916044 0.020210368976835737 1.0566063569640338e-09 8.976086780752906 -0.15468603315937068 RGLAPNT(ph)PGKAR ddPTM_A549_PD325901_60min_R1 2 RGLAPNTPGKAR 12 2 O43663-2;O43663-4;O43663;G3V3N7;H0YL53;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 RGLAPNT(1)PGKAR;RGLAPNT(1)PGKAR 50.088 0.0103 9313100.0 1394.3 1503.3600000000001 1870.59 1453.96 1497.5500000000002 2961.2799999999997 2280.29 2367.3 2248.21 1668.56 2105.89 True False 1535.8483095705906 1630.0534232423784 1997.5394861714612 1543.767807017258 1392.3672542670347 2937.1643174892547 2367.0676837725678 2320.082344389077 2153.7255520608733 1563.2068368417688 1846.8788803365944 0.8315912461409931 0.8825989839384055 1.081575791157138 0.835879289894693 0.7539028515033294 1.5903394363110348 1.2816583204098195 1.2562179193722987 1.1661433648904773 0.8464046307990016 1.0 10.850873541092145 RGLDVNK ddPTM_A549_PD325901_60min_R1 1 RGLDVNK 7 1 H0YHL7;B4E3S0;Q9ULV4;Q9ULV4-2;Q9ULV4-3 H0YHL7 CORO1C Coronin;Coronin-1C 0 64.757 0.025797000000000004 2639500.0 844.3 906.95 805.64 1216.3 877.89 1070.9 875.11 945.14 837.99 750.14 843.33 False True 930.0127144591903 983.3818594413021 860.3155751068783 1291.428088582279 816.2300349560861 1062.1789454557636 908.4127899285667 926.2884412520135 802.7721944887227 702.7760323803069 739.6057563093326 1.257443856440487 1.3296027661391168 1.1632083279068748 1.7461033497448233 1.10360151742073 1.4361420748752503 1.2282392101186301 1.252408372095745 1.0854055524048292 0.9502035731674023 1.0 9.530612642973582 -8.671056330047024 1.0379679413815672 1.0239977201719177 1.340273724402157 0.42409619753177075 0.16058002825821627 0.3047173514973423 0.6482076775377745 0.03138051472767886 0.03441127563005641 2.132768265081032e-09 8.671056330047024 0.31627600423023927 RGLLYDS(ph)DEEDEERPAR ddPTM_A549_MK2206_60min_R1 6 RGLLYDSDEEDEERPAR 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR 248.46 2.2223999999999996e-86 1201705000.0 23193.8 27406.8 27981.600000000002 25087.2 40181.0 30348.699999999997 26183.0 27967.199999999997 42536.5 41913.3 41934.299999999996 True False 27108.346406033168 28801.689056092415 31949.811636165832 31233.565126207188 34270.42812744884 33560.17929016337 30940.11218175841 31931.636245957892 32902.05066683255 32445.05641994892 31520.855982197245 0.8600130155521084 0.9137343564641583 1.0136086296073576 0.9908856899015586 1.0872302499273665 1.0646975865477104 0.9815758873817756 1.0130320148663683 1.043818438351274 1.029320283632959 1.0 14.944019092786096 -5.627415004511143 2.0549372114319393 1.0240835585376422 0.8548388172679302 0.7691404462247815 0.02982694454479605 0.1438730267277011 1.0398571447394145 0.0044528798201387875 0.034290887182049236 2.358223677214365e-06 5.627415004511143 -0.169244741269712 RGLLYDS(ph)DEEDEERPAR ddPTM_A549_PD325901_60min_R1 7 RGLLYDSDEEDEERPAR 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLY(0.009)DS(0.991)DEEDEERPAR;RGLLY(0.001)DS(0.999)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR 262.12 3.457399999999999e-100 2178014800.0 24211.510000000002 24158.9 27576.8 29342.2 33377.700000000004 31126.299999999996 27873.1 33244.8 31908.7 32077.0 36570.4 True False 26669.444671628393 26194.855288666928 29448.327480769785 31154.60105302881 31033.365498813942 30872.817732691852 28933.826073245567 32581.706383958932 30567.688304493287 30051.652745704952 32072.47263886594 0.8315369061788498 0.8167395006808293 0.9181807655541914 0.9713813276521487 0.9676012775269223 0.9625954967774973 0.9021389276417401 1.01587759543291 0.9530817485974209 0.9369920767907328 1.0 14.969047962712125 -5.9252270201062265 2.6496131077563034 0.9724972016998901 0.8210816885317447 0.7583183352349183 0.029752839536208386 0.08750188895617084 1.2170418120182636 0.004132198302081628 0.016215462175558776 1.187881120319339e-06 5.9252270201062265 -0.1514155131681454 RGLLYDS(ph)DEEDEERPARK ddPTM_A549_MK2206_60min_R1 6 RGLLYDSDEEDEERPARK 18 3 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 RGLLYDS(1)DEEDEERPARK;RGLLYDS(1)DEEDEERPARK;RGLLYDS(1)DEEDEERPARK;RGLLYDS(1)DEEDEERPARK;RGLLY(0.011)DS(0.989)DEEDEERPARK;RGLLYDS(1)DEEDEERPARK 200.89 2.9465e-49 211524200.0 12361.910000000002 13476.670000000002 11441.26 10030.529999999999 16316.49 12063.11 10822.67 12504.45 19968.899999999994 18540.0 18336.9 True False 14448.298188317804 14162.574939488344 13063.802708937268 12488.0103002876 13916.355935323609 13339.620293355643 12789.009048090416 14276.994080772052 15445.976033780698 14351.801123410778 13783.341657305671 1.0482434918574104 1.0275138853560715 0.947796480254335 0.9060219655564079 1.0096503650076347 0.9678074174621624 0.9278598300805943 1.035815148150574 1.1206263631717908 1.0412424998406538 1.0 13.750638079490864 -8.469761198839079 8.48043501611634 1.05806733482631 0.9758561217132642 0.35820641762463357 0.04734141020290051 0.34388122827120887 51.887513085885416 0.009556999758758896 0.011526113705041719 3.390305242181159e-09 8.469761198839079 -0.08221121311304591 RGLLYDS(ph)DEEDEERPARK ddPTM_A549_PD325901_60min_R1 4 RGLLYDSDEEDEERPARK 18 3 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 RGLLYDS(1)DEEDEERPARK;RGLLYDS(1)DEEDEERPARK;RGLLYDS(1)DEEDEERPARK;RGLLYDS(1)DEEDEERPARK 235.92 8.175099999999999e-75 364063000.0 11783.0 12009.5 12850.5 13025.6 14429.400000000001 14908.3 13421.8 15234.8 14066.0 15643.4 17328.6 True False 12979.201485813857 13021.58271234391 13722.612206334019 13830.161728716046 13415.928722727625 14786.891747631116 13932.573943690777 14930.929962530596 13474.854935832613 14655.673054280653 15197.292055045942 0.8540469867132932 0.8568357221259275 0.9029643015761952 0.9100411888264022 0.8827841614238865 0.9729951687492535 0.9167800351026851 0.982473055623952 0.8866615767483766 0.9643608217303782 1.0 13.891526658034188 RGLNSSFET(ph)SPK ddPTM_A549_MK2206_60min_R1 1 RGLNSSFETSPK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 RGLNSSFET(0.568)S(0.432)PK 77.77600000000001 0.0006445 10224000.0 1538.2 1345.4 1035.2 924.03 1837.5 967.62 1012.9 1248.0 1907.3 1974.7 1828.4 True False 1797.8105546206416 1413.8751133319738 1182.00692618574 1150.4173914812827 1567.206184121531 1070.0129061458272 1196.9308188100333 1424.9078218397076 1475.2995953322384 1528.6138985112877 1374.3578187271382 1.3081095258625473 1.0287532795800112 0.860043076176811 0.8370581342104504 1.140318891315363 0.7785548214342171 0.8709018877766279 1.036780816774038 1.07344650369042 1.1122386598906344 1.0 10.424541948277417 -13.54789091239327 9.939100310802102 0.48617465646210967 1.0067048253165558 0.0 0.1496995593835958 0.0 0.0 0.0 0.01854238422563874 2.8321032840707113e-14 13.54789091239327 0.5205301688544461 RGLNSSFET(ph)SPK ddPTM_A549_PD325901_60min_R1 1 RGLNSSFETSPK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 RGLNSS(0.001)FET(0.5)S(0.5)PK 73.834 0.00030102 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RGLNSSFETS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RGLNSSFETSPK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 RGLNSSFET(0.112)S(0.888)PK 84.75299999999999 0.00018989 13515000.0 1824.4 1843.7 2220.4 1847.5 2174.3 1725.0 2096.9 1295.7 2839.2 2717.4 3127.3 True False 2132.314117702442 1937.5364549205904 2535.2861079045733 2300.1375829374256 1854.463350277794 1907.538355037672 2477.879587286757 1479.3694429148304 2196.1257332707423 2103.5374526837363 2350.70510091084 0.9070955420466069 0.82423629155773 1.0785215495224019 0.978488361660584 0.7888966376765999 0.8114749716153457 1.0541005702189696 0.6293300858289759 0.9342412761259581 0.8948538257175125 1.0 11.198877846988207 -9.318661998534305 2.6810586937827283 0.977536063905519 0.8876791567100942 0.024390221621157226 0.12358628185857883 0.4345677495527344 6.349038174559752 0.023722496062510073 0.021462034799477718 4.801069595399358e-10 9.318661998534305 -0.08985690719542472 RGLNSSFETS(ph)PK ddPTM_A549_PD325901_60min_R1 1 RGLNSSFETSPK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 RGLNSSFET(0.409)S(0.591)PK 82.90799999999999 3.3897e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RGNDPLT(ph)SSPGR ddPTM_A549_PD325901_60min_R1 1 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.374)S(0.374)S(0.251)PGR 60.549 0.0053424 16078000.0 2003.2 2079.3 2004.4 2086.7 2829.4 1988.0 2008.6 2501.1 2248.1 2117.3 2815.9 True False 2206.5633893221025 2254.5299083039854 2140.430637436357 2215.590719760455 2630.6727049001024 1971.8103871193002 2085.0383721480935 2451.2135984250062 2153.62017497834 1983.613316659321 2469.562151460816 0.8935038901599855 0.9129269765372647 0.8667247496363805 0.8971593277981971 1.0652385093219803 0.7984453381555586 0.8442947552118638 0.9925701189480264 0.87206559013079 0.8032246993605557 1.0 11.270039562135677 -10.916652126573009 1.0269578335138176 1.003268575826068 0.9032284656345423 0.0 0.08967064183668523 0.7154748919128179 1.264874973502867 0.05474211678588919 0.011320195682592299 1.2115682210148221e-11 10.916652126573009 -0.1000401101915257 RGNDPLTS(ph)SPGR ddPTM_A549_MK2206_60min_R1 5 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.003)S(0.9)S(0.098)PGR;RGNDPLT(0.002)S(0.499)S(0.499)PGR;RGNDPLT(0.011)S(0.495)S(0.495)PGR;RGNDPLT(0.044)S(0.72)S(0.236)PGR;RGNDPLT(0.06)S(0.47)S(0.47)PGR 149.3 1.764e-12 840661600.0 7913.700000000001 8669.2 7800.9 7719.0 10016.8 6858.900000000001 7136.1 8045.0 11333.9 11604.0 12430.2 True False 9249.33908861095 9110.425250852948 8907.184921254182 9610.15534651908 8543.341989174723 7584.704245430667 8432.636998825432 9185.403386779197 8766.789746519187 8982.648340671993 9343.438283932444 0.9899288471265109 0.9750613183285858 0.9533091192534048 1.0285459222270776 0.9143681083511178 0.8117680039128417 0.9025196873539281 0.983086001924472 0.9382830474296707 0.9613857412767537 1.0 13.189737828427937 -6.7711443543438214 24.99115320895368 0.9504171953157347 0.9834932949804721 0.14979514773851244 0.05192993782483295 479.22653762594814 1234052.616672018 0.008805411400185916 0.016791031967049633 1.6937747162095446e-07 6.7711443543438214 0.03307609966473746 RGNDPLTS(ph)SPGR ddPTM_A549_PD325901_60min_R1 4 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.001)S(0.499)S(0.499)PGR;RGNDPLT(0.006)S(0.497)S(0.497)PGR;RGNDPLT(0.006)S(0.497)S(0.497)PGR;RGNDPLT(0.009)S(0.655)S(0.336)PGR 187.11 1.8913e-19 208873900.0 8232.5 8713.8 8723.7 8693.5 10266.3 8939.8 9279.0 9227.000000000002 10142.5 10024.4 11464.7 True False 9068.257339553813 9448.142507083765 9315.74274186966 9230.477750628994 9545.230504812294 8866.997232781241 9632.117422663634 9042.960246558529 9716.24599649384 9391.45767322519 10054.614580721192 0.90190004467614 0.9396822156862897 0.926514155970906 0.918033971021385 0.9493382792727236 0.8818833543140381 0.9579797758864215 0.8993840762327758 0.9663469363732606 0.934044522326341 1.0 13.295570160035147 -9.159302670465836 1.1838324473670105 0.9911765152554903 0.9226388852638956 0.2183401949305519 0.028587228762206807 0.17460915179933784 0.507147015076012 0.004874491693177207 0.004343226887314375 6.92942708942183e-10 9.159302670465836 -0.06853762999159474 RGNDPLTSS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.001)S(0.12)S(0.88)PGR;RGNDPLT(0.041)S(0.407)S(0.552)PGR 160.18 4.6989e-14 850710000.0 3761.3999999999996 4234.799999999999 4139.5 4198.0 5010.0 3705.5 5020.3 4173.9 5957.700000000001 6446.6 6774.5 True False 4396.232362599194 4450.333231706736 4726.543345195001 5226.5101884553815 4273.035636706871 4097.613550488173 5932.423526184229 4765.563107032652 4608.290462491938 4990.308582641854 5092.20468331164 0.8633259336583009 0.8739501863095824 0.9281919402582152 1.0263747263702678 0.8391327337470584 0.8046835909634628 1.1650009956642522 0.93585458625623 0.9049696053252527 0.9799897869377239 1.0 12.314074694801556 RGNDPLTSS(ph)PGR ddPTM_A549_PD325901_60min_R1 3 RGNDPLTSSPGR 12 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.001)S(0.119)S(0.88)PGR;RGNDPLT(0.004)S(0.03)S(0.967)PGR;RGNDPLTSS(1)PGR 195.16 1.7246999999999998e-24 1961080000.0 13086.7 12276.1 12660.6 12373.099999999999 15229.599999999999 14092.099999999999 12437.9 14213.699999999999 14417.9 14718.5 15975.6 True False 14415.252150080649 13310.650029976705 13519.824450372555 13137.358285651071 14159.925435267756 13977.33860982087 12911.231090780042 13930.196603068063 13811.965802597833 13789.171398125081 14010.702477672285 1.0288743318226237 0.9500344505344256 0.9649640674275967 0.9376659240739006 1.0106506406679663 0.9976186870069803 0.9215263197084956 0.9942539730086684 0.9858153668318086 0.9841884388095287 1.0 13.774241671909682 RGNVAGDSK ddPTM_A549_MK2206_60min_R1 2 RGNVAGDSK 9 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 70.028 0.0037801 12370700.0 2953.8999999999996 2349.51 1626.69 1529.7 2740.0 2629.8999999999996 2298.37 2695.59 2664.5699999999997 3388.2 3173.5 False True 3452.446104078737 2469.0900234314 1857.379102354213 1904.4765686708427 2336.949629656052 2908.1942724136666 2715.9540784168366 3077.6981373981557 2061.049149443937 2622.803266792902 2385.432365855708 1.447304125447408 1.0350702282626578 0.7786341499093098 0.7983779359796118 0.9796754932591583 1.2191476539182582 1.1385584086524971 1.2902055750778396 0.8640149177755423 1.099508543748648 1.0 11.220035066843526 -5.277137435891575 4.3625867055568355 0.9747523875707482 1.4754065478937344 0.3420624923186537 0.1608841932083761 0.14820041924007243 6.628487989173725 0.023108707559235653 0.2220185300439701 5.282780475927231e-06 5.277137435891575 0.5006541603229862 RGNVAGDSK ddPTM_A549_PD325901_60min_R1 2 RGNVAGDSK 9 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 98.04799999999999 0.00085421 17555800.0 2853.2 2659.1 2006.23 1746.6799999999998 2716.0 1855.29 1494.92 1552.6100000000001 2090.7 2796.8999999999996 3024.8999999999996 False True 3142.854763585175 2883.1916891122605 2142.384832241041 1854.5684566019017 2525.2375296913406 1840.1811333594385 1551.8099986516117 1521.6419755510176 2002.8351496050952 2620.303256678059 2652.856476420975 1.184705916629635 1.0868253577751164 0.807576607058433 0.6990836002948563 0.9518937613610338 0.6936602676078677 0.5849581432106691 0.57358624150067 0.7549730516545556 0.9877289932447328 1.0 11.373330910339227 -5.683532712862603 3.960410898166626 0.8167674566427523 1.161973687885492 0.46255655875955215 0.14403379638210315 0.17750287040247 5.231437674210146 0.023157521830653744 0.10040405439235095 2.0723699541985673e-06 5.683532712862603 0.34520623124273975 RGPDRGS(ph)PEYR ddPTM_A549_PD325901_60min_R1 2 RGPDRGSPEYR 11 2 P49716 P49716 CEBPD CCAAT/enhancer-binding protein delta 1 RGPDRGS(1)PEYR;RGPDRGS(1)PEYR 59.607 0.0030057 54122000.0 2151.0 1690.84 1913.52 1827.5300000000002 1887.25 1877.92 1426.88 1748.43 2030.95 2202.98 2777.8 True False 2369.367936517494 1833.3330208034965 2043.382974130522 1940.4123774782295 1754.69607065905 1862.6268421423924 1481.1806992186964 1713.5561920332 1945.5962343188717 2063.8834668370823 2436.148209925016 0.9725877624622938 0.7525539757123094 0.8387761326694555 0.7965083444319485 0.7202747614083214 0.7645786223325565 0.6080010621620952 0.7033874971366962 0.798636235017391 0.8471912580805615 1.0 11.250386190984935 -10.228129698507509 0.8638720139190028 0.9882249017607327 0.7677754065878312 0.22468032780902303 0.09557184721142478 0.3578242344621095 0.5209275274244324 0.043337541025813955 0.017183785730277575 5.91384995491835e-11 10.228129698507509 -0.22044949517290158 RGPEEDRFS(ph)R ddPTM_A549_MK2206_60min_R1 4 RGPEEDRFSR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RGPEEDRFS(1)R;RGPEEDRFS(1)R;RGPEEDRFS(1)R;RGPEEDRFS(1)R 78.486 0.00027273 77556800.0 1857.48 2007.97 1827.6100000000001 1528.83 2708.24 1780.83 1638.77 1852.78 2936.7 2997.99 2558.86 True False 2170.9772129740923 2110.1670962666885 2086.79257956561 1903.393418631786 2309.8614835838334 1969.2762485807182 1936.5132964175311 2115.417238900779 2271.542138946248 2320.7419768055165 1923.4244410567305 1.1287041833477773 1.0970886358849437 1.0849360832802588 0.9895857502913192 1.200910955625995 1.0238386320487831 1.006804975064999 1.0998182167938801 1.1809884965890636 1.2065677898584357 1.0 10.909461441224693 -5.390089369293333 2.5959763649272816 1.080064274509548 1.131983235798493 0.013941949431404588 0.07647513374810475 1.279136467169493 12.98389456457489 0.010891277020829992 0.1254694102583696 4.072964555513188e-06 5.390089369293333 0.05191896128894502 RGPEEDRFS(ph)R ddPTM_A549_PD325901_60min_R1 3 RGPEEDRFSR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RGPEEDRFS(1)R;RGPEEDRFS(1)R;RGPEEDRFS(1)R 93.348 0.00012346 59344100.0 1814.1899999999998 1990.81 2313.04 2220.31 2407.08 1818.54 2355.04 2200.61 1986.3000000000002 2565.9300000000003 2531.44 True False 1998.3652332639097 2158.582545448302 2470.016803839449 2357.4535060101293 2238.0150047751963 1803.7304131750147 2444.6623359273353 2156.7171072048523 1902.8227185443154 2403.9167418956486 2220.088928120306 0.9001284624016732 0.9722955319974143 1.1125756146762782 1.0618734574772761 1.0080744858585768 0.8124586318720973 1.1011551406623925 0.971455278159011 0.8570930175105139 1.0828020046615814 1.0 11.116401751142245 -7.032808125240581 24.974758073243922 0.9395204988509499 1.0184649391633036 0.0 0.09589208415914105 955.6135553172543 727447.1802316648 0.013534400633835259 0.02345449039109056 9.272393946428488e-08 7.032808125240581 0.0789444403123537 RGPEVTSQGVQTS(ph)SPACK ddPTM_A549_MK2206_60min_R1 1 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.045)S(0.595)S(0.36)PACK 110.33 1.0507000000000001e-09 36363000.0 2212.1 2808.8 2633.9 1853.7 3001.0 2700.1 2421.8 2295.8 3959.5 3641.6 3566.9 True False 2585.448399347497 2951.7559226451995 3007.426625657475 2307.8565832157547 2559.5568754006617 2985.8227898186788 2861.8097117130387 2621.236680592629 3062.679572022228 2818.9600307989604 2681.140288568055 0.9643092569126007 1.1009330377940332 1.1216968535666156 0.8607742731911787 0.9546523493433726 1.1136391491895221 1.0673852927112126 0.9776574138135012 1.1423048562885703 1.051403405789151 1.0 11.388630993846899 -7.262001026058581 24.994886244180798 1.0642203260671321 1.0050278616942674 0.1163425961497978 0.07870852280837017 99.69696946269599 4436805.003090396 0.013016432805138365 0.02158987951978101 5.4701467052259016e-08 7.262001026058581 -0.05919246437286474 RGPEVTSQGVQTS(ph)SPACK ddPTM_A549_PD325901_60min_R1 2 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.028)S(0.733)S(0.24)PACK;RGPEVTSQGVQT(0.015)S(0.924)S(0.061)PACK 123.17 7.7359e-11 93312000.0 11582.7 12163.900000000001 10978.8 9987.8 12099.0 11050.1 10394.599999999999 10533.9 9823.5 11858.5 12908.0 True False 12758.567177266934 13188.994542210761 11723.887388887584 10604.723722060417 11249.207979284063 10960.111649248973 10790.17219114337 10323.79310081532 9410.652457141461 11109.75228621573 11320.397830553717 1.1270422972973266 1.1650645798519297 1.0356427012878338 0.9367801274119804 0.9937113648888282 0.9681737173288794 0.9531619252832909 0.9119638068682918 0.8313005071025102 0.9813923903125157 1.0 13.466637038963217 -5.977756114952501 0.9803159657093414 0.924272776894483 1.1850333565714073 0.6829351201079112 0.05025554311787498 0.42359675955485654 0.5781113624285221 0.010241326130624416 0.08901122755246375 1.0525527858260568e-06 5.977756114952501 0.26076057967692434 RGPEVTSQGVQTSS(ph)PACK ddPTM_A549_MK2206_60min_R1 1 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.007)S(0.186)S(0.807)PACK 100.76 3.3077e-09 32798000.0 1405.3 2515.8 2415.1 1755.9 2978.0 2520.0 2379.8 2593.2 3477.3 3303.4 2993.8 True False 1642.4802837136835 2643.843474149384 2757.5974955865313 2186.0955788253473 2539.9401449327465 2786.6647273593835 2812.178855369846 2960.794041341929 2689.6971021070553 2557.159645689061 2250.356835323401 0.7298754837152932 1.1748552196920514 1.2254045457596214 0.971443970356453 1.1286832848301276 1.238321266928722 1.2496590812744173 1.3156998014123527 1.1952313783696071 1.1363351827362833 1.0 11.135938069985945 -5.257811806064605 24.500064637488627 1.1336809131646703 0.7298752776092875 0.5835498271015829 0.10253685240145956 179.2585646125986 1210612.8454252027 0.01668967979467557 0.16959275127088402 5.52316724246685e-06 5.257811806064605 -0.40380563555538285 RGPEVTSQGVQTSS(ph)PACK ddPTM_A549_PD325901_60min_R1 2 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.007)S(0.072)S(0.921)PACK;RGPEVTSQGVQT(0.01)S(0.202)S(0.788)PACK 72.771 0.00029211 10144700.0 3337.2 2791.9 3227.2 3407.8999999999996 3881.8 3398.0 3321.8 3458.6000000000004 3392.2 3910.0 4095.3999999999996 True False 3675.9900872832072 3027.1832111739013 3446.217198730099 3618.398243097548 3609.1557594830037 3370.327814603308 3448.2129167587063 3389.61550978079 3249.6376306932607 3663.1219327152257 3591.6917628795836 1.0234703671609167 0.842829343670322 0.9594969240810206 1.0074356269917084 1.0048623316688565 0.9383677768331655 0.9600525725498656 0.9437378632578476 0.9047651761987264 1.019887611340672 1.0 11.810447828714944 -5.922945496479718 24.999999567833548 0.959714818171213 0.9251534794856316 0.03485238458537798 0.05199062818101314 77.77546431513288 25230.078973502543 0.0070623200413836296 0.02195764520054128 1.1941379581724637e-06 5.922945496479718 -0.03456133868558131 RGPEVTSQGVQTSS(ph)PACKQEK ddPTM_A549_MK2206_60min_R1 1 RGPEVTSQGVQTSSPACKQEK 21 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.003)S(0.128)S(0.868)PACKQEK 108.57 1.065e-10 8278100.0 2004.4 2410.9 2169.7 2066.8 2695.3 2176.2 2303.2 2220.3 2640.9 3579.1 3651.9 True False 2342.693717124959 2533.604512213509 2477.3960855343867 2573.166092782177 2298.82494044232 2406.484039555353 2721.6616268963044 2535.034324383575 2042.7403666507141 2770.578824207096 2745.0324426873976 0.8534302475607366 0.9229779848186787 0.9025015686550524 0.9373900478433098 0.8374490970284348 0.876668706035181 0.9914861422299938 0.9234988574130535 0.7441589158964049 1.0093064042240203 1.0 11.42260748475873 RGPEVTSQGVQTSS(ph)PACKQEK ddPTM_A549_PD325901_60min_R1 2 RGPEVTSQGVQTSSPACKQEK 21 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB05;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.126)S(0.378)S(0.496)PACKQEK;RGPEVTSQGVQT(0.047)S(0.02)S(0.933)PACKQEK 144.26 2.7091000000000005e-22 40882000.0 4863.299999999999 5389.1 6074.6 4515.299999999999 6476.4 5954.7 5866.799999999999 6192.4 5832.200000000001 5881.4 5807.4 True False 5357.018635827764 5843.258370048098 6486.858885537266 4794.199826009671 6021.520006367077 5906.206897474493 6090.064284436143 6068.887724156174 5587.0929160218275 5510.047400273999 5093.126616141744 1.0518133632982267 1.1472831544240323 1.2736496408666416 0.9413078031116133 1.1822835873121547 1.159642660120767 1.1957417797418946 1.1915839093656009 1.0969868485724557 1.0818594972312097 1.0 12.31433586802932 -9.768576627267418 0.928412039450388 1.0139211684110296 1.1424851453156286 0.1500386133072067 0.08505652166017064 0.4472108479372429 0.7989794173664179 0.027103230870546495 0.016097653891888792 1.7038186696574956e-10 9.768576627267418 0.12856397690459898 RGPGT(ph)PGPVAR ddPTM_A549_MK2206_60min_R1 2 RGPGTPGPVAR 11 1 Q8N6S5 Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 1 RGPGT(1)PGPVAR;RGPGT(1)PGPVAR 118.52 9.5666e-06 156088000.0 3738.5 3931.3 3885.2 3741.3 4223.0 3492.1 3822.6000000000004 3614.8999999999996 4979.299999999999 5683.9 5672.6 True False 4369.467402450439 4131.386378060047 4436.1797813145595 4657.918667953339 3601.8022941742734 3861.6317041316265 4517.116939464145 4127.323145166951 3851.4965003081898 4399.903042360009 4263.936864204536 1.0247495546033585 0.9689135908044884 1.0403952784939177 1.0923986016435314 0.8447128578312597 0.9056493628106378 1.0593770694367075 0.9679606609130524 0.9032724036421 1.031887474530146 1.0 12.057970361039343 -6.738875390976644 24.999964688028506 0.9524036277143577 1.027762813710523 0.22787766864273074 0.06344309839681263 273.50521289601403 303030.8645201647 0.00908428186932736 0.018900273286897248 1.824419094809745e-07 6.738875390976644 0.07535918599616531 RGPGT(ph)PGPVAR ddPTM_A549_PD325901_60min_R1 2 RGPGTPGPVAR 11 1 Q8N6S5 Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 1 RGPGT(1)PGPVAR;RGPGT(1)PGPVAR 103.32 0.00013233 142257000.0 5391.7 4789.6 4704.299999999999 5109.4 5882.6 5185.0 5329.5 5572.0 5358.4 4988.9 5702.0 True False 5939.061414840247 5193.236401102663 5023.562087253967 5424.996033710674 5469.42646986829 5142.775079081269 5532.317038914303 5460.862088850563 5133.205082337942 4673.900002589 5000.690147956093 1.187648352351463 1.038503935946775 1.0045737565458284 1.08484946541389 1.093734326271701 1.0284130643813734 1.1063107041686036 1.0920216864631282 1.026499329184795 0.934650991023577 1.0 12.287911500414227 -8.91079017250174 3.9168684789722508 1.0111016630284768 1.075397432749019 0.369425265704433 0.05125500099748548 0.20623876636568367 5.750903011379205 0.007978985093857801 0.008348718993172497 1.228032406391116e-09 8.91079017250174 0.06429576972054218 RGPLAGLGPGST(ph)PR ddPTM_A549_MK2206_60min_R1 1 RGPLAGLGPGSTPR 14 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 RGPLAGLGPGS(0.048)T(0.952)PR 124.04 6.51e-07 22174000.0 2337.1 2067.6 2021.5 1824.6 2824.2 1938.0 1744.9 1840.9 2755.9 2688.4 2626.2 True False 2731.545343390911 2172.832008566367 2308.1790970676884 2271.627081909405 2408.763921195116 2143.0778736597144 2061.925743648559 2101.8532125198053 2131.693050267977 2081.0885728251114 1974.0420605672796 1.3837320885685425 1.1007019819739614 1.1692654088659022 1.1507490783943117 1.2202191479663358 1.0856292864620418 1.0445196608708653 1.0647459111969462 1.0798620216103163 1.0542270675970653 1.0 10.946937014033587 -2.0000000000000195 0.18884239895580793 1.0034658928720663 2.2348564320584745 0.6338029706015493 0.06147192722232508 22.851578989601858 0.24647486392391652 0.054278403079640235 8.28341166931929 0.009999999999999551 2.0000000000000195 1.2313905391864082 RGPLAGLGPGST(ph)PR ddPTM_A549_PD325901_60min_R1 2 RGPLAGLGPGSTPR 14 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 RGPLAGLGPGS(0.085)T(0.915)PR;RGPLAGLGPGS(0.05)T(0.95)PR 101.08 1.8667999999999998e-05 66998000.0 4432.8 11765.7 4357.200000000001 7141.599999999999 4303.4 4159.9 4309.6 4079.2 11429.5 4917.6 12507.900000000001 True False 4882.814592745113 12757.236830727745 4652.905793972111 7582.7204122496105 4001.1440299240485 4126.0231536104475 4473.604186303611 3997.837155929507 10949.157862156897 4607.1018967571335 10969.507594110852 0.44512614179386933 1.1629726057691654 0.42416724306477477 0.6912544020043808 0.36475147089301657 0.3761356759373198 0.4078217867049323 0.3644500103246026 0.9981448819120304 0.41999167758728995 1.0 13.421211146176756 -8.77547732275363 24.62353967910332 0.9991240510106658 0.5379047187725186 0.05853999388863007 0.2819293218600982 121.09346257065155 212405.65761534992 0.038255111745462964 0.040827458282452836 1.6769598980859013e-09 8.77547732275363 -0.46121933223814726 RGPLSQNGSFGPSPVSGGECS(ph)PPLTVEPPVRPLSATLNR ddPTM_A549_MK2206_60min_R1 4 RGPLSQNGSFGPSPVSGGECSPPLTVEPPVRPLSATLNR 39 2 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 RGPLSQNGS(0.008)FGPS(0.135)PVS(0.135)GGECS(0.691)PPLT(0.03)VEPPVRPLS(0.001)AT(0.001)LNR;RGPLSQNGSFGPS(0.012)PVS(0.042)GGECS(0.944)PPLT(0.002)VEPPVRPLSATLNR;RGPLSQNGSFGPS(0.003)PVS(0.046)GGECS(0.932)PPLT(0.015)VEPPVRPLS(0.001)AT(0.001)LNR;RGPLSQNGSFGPS(0.001)PVS(0.03)GGECS(0.962)PPLT(0.006)VEPPVRPLS(0.001)AT(0.001)LNR 94.07 5.546e-10 46466900.0 3112.66 3549.42 3474.9799999999996 3260.73 4481.32 3163.0699999999997 3352.48 3429.28 4844.21 5128.41 5009.5 True False 3638.0009107693973 3730.07031720141 3967.784416882651 4059.6089963797317 3822.123764368706 3497.783967924062 3961.582220795988 3915.3909417295463 3747.0041696137882 3969.898619164569 3765.5028948335157 0.9661394539786283 0.9905902136788366 1.0537196564970583 1.078105397807487 1.015036735096626 0.9289022118992979 1.0520725468652552 1.0398055853579837 0.9950873161603172 1.0542811226122004 1.0 11.878626838917123 -7.006591895911031 24.982675703243515 1.0001945965812933 1.0251947578014193 0.0 0.04326728745976554 651.2297268091362 2468112.1204098864 0.005856944616448267 0.010780482884825679 9.849362100681292e-08 7.006591895911031 0.02500016122012605 RGPLSQNGSFGPSPVSGGECS(ph)PPLTVEPPVRPLSATLNR ddPTM_A549_PD325901_60min_R1 2 RGPLSQNGSFGPSPVSGGECSPPLTVEPPVRPLSATLNR 39 2 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 RGPLSQNGSFGPSPVS(0.002)GGECS(0.997)PPLT(0.001)VEPPVRPLSATLNR;RGPLSQNGSFGPS(0.002)PVS(0.014)GGECS(0.973)PPLT(0.012)VEPPVRPLSATLNR 120.13 9.8744e-22 62407000.0 2835.2 3159.0 2870.1 2499.8 3275.3 3158.0 2892.5 3208.8 3251.9 3714.8999999999996 3196.7 True False 3123.0274168360743 3425.220016511464 3064.8822453133535 2654.2069685422844 3045.254227171592 3132.282295031564 3002.5756703367347 3144.7979667450954 3115.2339517868704 3480.340580011198 2803.526165550904 1.1139640696816493 1.2217542531258647 1.093224055824388 0.9467387895845525 1.08622286625714 1.1172652260286853 1.070999695751624 1.1217294867398286 1.1111841901338968 1.2414154084869393 1.0 11.453026819326087 -10.73537374824248 0.8805505739235419 0.9970102021166597 1.0978208005876635 0.0 0.09383232127776574 0.7515200110788167 0.9864278930318923 0.0505506850782195 0.011598861983879803 1.8391885382239298e-11 10.73537374824248 0.10081059847100382 RGPNYTSGYGTNSELS(ph)NPS(ph)ETESER ddPTM_A549_MK2206_60min_R1 1 RGPNYTSGYGTNSELSNPSETESER 25 1 E7EU85;E9PFF5;P51114-2;B4DXZ6;P51114-3;P51114 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 2 RGPNYTSGYGT(0.002)NS(0.036)ELS(0.941)NPS(0.949)ET(0.068)ES(0.004)ER 79.911 9.468799999999999e-07 7833600.0 1198.7 1541.6 1066.3 1245.2 2262.9 1834.9 1291.2 1530.4 1816.6 2109.7 1378.4 True False 1401.0112545987267 1620.0608552940168 1217.517373832935 1550.274055899152 1930.0304076455034 2029.0679000919577 1525.7943264364833 1747.3388866534358 1405.143000514099 1633.1173047497161 1036.1052380953233 1.3521901087713943 1.5636064713582392 1.175090453235332 1.4962515378737273 1.8627744911255217 1.9583608165344302 1.4726248554069252 1.6864492354710765 1.3561778754223648 1.576207941725961 1.0 10.016954830898332 -9.59980995726202 0.8913942309159616 1.0571903093900408 1.5721551412775019 0.025569363958077407 0.26373237441022934 0.32474400844522516 0.544305642787862 0.07387279885766615 0.04792140176770329 2.512985847355776e-10 9.59980995726202 0.5149648318874611 RGPNYTSGYGTNSELS(ph)NPSETESER ddPTM_A549_MK2206_60min_R1 2 RGPNYTSGYGTNSELSNPSETESER 25 1 E7EU85;E9PFF5;P51114-2;B4DXZ6;P51114-3;P51114 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RGPNYTSGYGTNSELS(0.989)NPS(0.011)ETESER;RGPNYTSGYGTNSELS(0.986)NPS(0.014)ET(0.001)ESER 203.73 1.2243999999999999e-68 190556000.0 1930.15 2349.2 1532.04 1780.08 2625.7 2219.5 2412.72 2099.2 2643.0 2719.7 2545.8999999999996 True False 2255.9121323631703 2468.764245755516 1749.3063091128276 2216.199679910827 2239.4630082437575 2454.366016815139 2851.079993246464 2396.7680285303804 2044.3647200037256 2105.3178810863174 1913.6827667345335 1.1788328617352861 1.2900592975334995 0.9141046465594743 1.1580810144894087 1.1702373283452452 1.2825354648530465 1.489839404318556 1.2524374834707703 1.0682882009185801 1.1001394367357897 1.0 10.902135977186603 -8.87816708533727 4.336764679336497 1.0292239019293028 1.2168170474499338 0.22524531659638758 0.13160048272139832 0.21395259224068763 6.880235111781418 0.024593179630288217 0.02595583650415722 1.3238321216497304e-09 8.87816708533727 0.187593145520631 RGPNYTSGYGTNSELSNPS(ph)ETESER ddPTM_A549_PD325901_60min_R1 2 RGPNYTSGYGTNSELSNPSETESER 25 1 E7EU85;E9PFF5;P51114-2;B4DXZ6;P51114-3;P51114 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RGPNYTSGYGTNSELS(0.018)NPS(0.981)ET(0.001)ESER;RGPNYTSGYGTNSELSNPS(0.999)ETESER 250.9 3.735899999999999e-124 284670000.0 6415.9 5539.5 6910.8 5601.700000000001 6827.6 7438.2 7168.6 6274.799999999999 7879.5 8162.1 8696.0 True False 7067.237444864056 6006.333105876941 7379.808446016355 5947.704286616255 6348.052929941309 7377.62576532735 7441.404995808439 6149.64419151463 7548.352016699354 7646.7436130473025 7626.447128485827 0.9266749412668126 0.7875663470402177 0.9676600809899747 0.7798787805662171 0.832373557830154 0.9673738821017855 0.9757367841722483 0.8063576771606878 0.9897599615560465 1.0026613289542996 1.0 12.896795401503583 -8.512038708539887 0.6044060686762616 1.003781757634331 0.8631386875841769 0.2991700918195257 0.07267145137955662 0.5338353592748407 0.42014855973984166 0.020406422826607606 0.02395809641175887 3.075822655351223e-09 8.512038708539887 -0.1406430700501542 RGPRT(ph)PPITTK ddPTM_A549_MK2206_60min_R1 2 RGPRTPPITTK 11 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 RGPRT(1)PPITTK;RGPRT(1)PPITTK 107.11 5.0013000000000004e-05 21968900.0 3049.9 2846.0 2925.1000000000004 2523.2 4369.5 3309.7 2837.4 3310.8999999999996 4291.6 3962.8 4352.5 True False 3564.6485571040785 2990.8492437511513 3339.9231643990597 3141.3841132707507 3726.7523382416516 3659.930257198948 3352.918852099504 3780.2302142059975 3319.559452276953 3067.6007277158724 3271.6541271110673 1.08955544156244 0.9141703638434813 1.020866825964967 0.9601822170745942 1.1391033995187152 1.1186788440961317 1.0248390330490695 1.1554492215055792 1.0146425396159424 0.937629898678997 1.0 11.67580452209921 -4.943660783475831 15.320414139952398 1.0255495813746782 1.5562758662749743 0.04918489568192175 0.07606439745403956 3158253.5477096634 21708804.284275215 0.00973014873012586 50688344.05681462 1.1385162050664886e-05 4.943660783475831 0.530726284900296 RGPS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 RGPSSPR 7 1 P98175-5 P98175-5 RBM10 RNA-binding protein 10 1 RGPS(0.564)S(0.436)PR 58.981 0.025256999999999998 8370700.0 1029.0 760.26 959.76 718.24 955.27 821.12 715.16 651.16 816.73 1178.1 1266.5 True False 1133.4633224902375 824.3297783327016 1024.895085105727 762.6040535586089 888.1751307025941 814.4330709614685 742.3758051505683 638.172102974862 782.4056783550814 1103.7145649441966 1110.72852900498 1.02046836188283 0.7421523412846505 0.9227232922736353 0.6865800541215682 0.7996329503647889 0.7332422366886167 0.6683683598328102 0.5745527249097973 0.7044076549073437 0.9936852580287403 1.0 10.117290538188776 -10.748740015662978 1.071270152523585 0.9959702152032666 0.7541872271291252 0.37368536858006196 0.11664132946302666 0.42368326295849557 0.8854192209041494 0.07382251977303077 0.02020842980453682 1.7834460830837304e-11 10.748740015662978 -0.24178298807414134 RGPS(ph)VTR ddPTM_A549_PD325901_60min_R1 2 RGPSVTR 7 1 P51788-4;P51788-5;P51788-3;P51788 P51788-4 CLCN2 Chloride channel protein 2 1 RGPS(0.999)VT(0.001)R;RGPS(0.999)VT(0.001)R 67.704 0.009754 6892400.0 943.8 850.3399999999999 813.22 960.44 1090.91 850.51 957.0699999999999 965.14 857.8299999999999 890.27 1013.23 True False 1039.6138812111615 922.0011360684892 868.4099994891209 1019.7641974824995 1014.2882450351916 843.5837285456917 993.4918225787991 945.8895255623171 821.7783882841818 834.0582002655709 888.6091333941695 1.1699338237051513 1.0375778296884866 0.9772688202878411 1.1475958992086481 1.1414335132489273 0.9493304725819136 1.1180301723706296 1.0644607285875591 0.9247917418373609 0.9386108795435925 1.0 9.795405159656017 -8.708631073700477 8.453291772232413 0.9645237105009483 1.0731552109763964 0.3837404952384801 0.0680563729680317 0.22650267336838678 32.93558714040311 0.01148317808919302 0.012999485126837134 1.9560003416082634e-09 8.708631073700477 0.10863150047544812 RGPSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RGPSSPR 7 1 P98175-5 P98175-5 RBM10 RNA-binding protein 10 1 RGPS(0.081)S(0.919)PR 80.78699999999999 0.012627 55058000.0 2528.0 2218.9 1745.5 1433.8 2022.6 1375.8 1408.3 1519.6 2054.5 3977.7 3864.4 True False 2954.664596334013 2331.832532311815 1993.0381468867922 1785.0810643657276 1725.0782193220189 1521.3862428178725 1664.1698806695322 1735.007953579822 1589.1590303623348 3079.134807367372 2904.7628279857568 1.017179291840105 0.8027617641777565 0.6861276685604036 0.6145359088072442 0.5938791982263957 0.5237557531927121 0.5729107604366839 0.5972976302450568 0.5470873611613591 1.0600296787405978 1.0 11.504204657979582 -10.850086611569871 1.0876377610636594 1.0007052818049615 0.647847235934995 0.5092780299171504 0.13714777988681343 0.377305483225201 0.789723038147867 0.10105569256110347 0.02447455974330616 1.4122558696285346e-11 10.850086611569871 -0.3528580458699665 RGPSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RGPSSPR 7 1 P98175-5 P98175-5 RBM10 RNA-binding protein 10 1 RGPS(0.004)S(0.996)PR 88.921 0.010225 116860000.0 5482.5 4461.2 4435.5 4034.7 4627.1 4175.0 3118.5 3786.5 4572.7 5117.8 5397.6 True False 6039.07936399682 4837.160980582762 4736.51970282826 4283.914255531462 4302.108458628426 4141.000184216839 3237.1762240086787 3710.9752870482134 4380.525320992591 4794.66123459079 4733.72941820551 1.275755082403115 1.0218499101320542 1.000589447426382 0.9049765791546728 0.9088201032536614 0.8747859918420589 0.6838532450880656 0.7839432631650061 0.925385659802496 1.0128718418401654 1.0 12.208761528087885 -4.888049807452605 1.1419339396247334 0.9182135371938451 1.7526243477990486 0.588857494057945 0.0923925858383992 2.154353608537952 1.2850786428586527 0.015575940108422212 2.6359059783970062 1.2940474239487263e-05 4.888049807452605 0.8344108106052035 RGQS(ph)SPPPAPPICLR ddPTM_A549_MK2206_60min_R1 1 RGQSSPPPAPPICLR 15 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 RGQS(0.5)S(0.5)PPPAPPICLR 54.974 0.0062426 11854000.0 2137.3 2149.3 2023.2 1645.2 2416.9 2052.8 2238.2 2059.5 2793.6 2613.0 2466.9 True False 2498.023988031918 2258.6901895974524 2310.120182630399 2048.274073855836 2061.3772116480704 2270.0259334616426 2644.8519682699325 2351.4404319542273 2160.854060462506 2022.721485192685 1854.3006470236155 1.3471515485051246 1.218081972426064 1.245817492615575 1.1046073230592741 1.1116736732831534 1.2241951903027797 1.4263339510317545 1.268100960719926 1.1653202321484097 1.0908271473881033 1.0 10.85665945894147 -9.832917857457646 0.8671909790322406 1.0198453550486566 1.2352816093398966 0.3863780390496393 0.0916426783596423 0.3513386915433079 0.5465088682774305 0.036105386783024135 0.019742671914060112 1.4692041369206435e-10 9.832917857457646 0.21543625429124003 RGQSQS(ph)LR ddPTM_A549_PD325901_60min_R1 1 RGQSQSLR 8 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 RGQS(0.022)QS(0.978)LR 50.284 0.013225 4755700.0 489.98 757.36 762.93 438.16 1084.1 797.64 502.22 797.92 828.35 701.61 1277.5 True False 539.7224088957886 821.1853851551509 814.7070176707839 465.22414806644014 1007.956555941967 791.144284296699 521.3322569253291 782.0048596438696 793.5373301647201 657.3102248624884 1120.3755987397244 0.48173345572940496 0.7329554357296578 0.7271731181821725 0.41523945058224787 0.8996595044338577 0.7061420162904588 0.4653191818098855 0.6979845513625275 0.7082779480893242 0.5866873801981016 1.0 10.129766752301258 -10.327625990190242 0.5367981491877434 1.033065796242937 0.6386056792635754 0.0 0.181026578889452 0.6924834649667424 0.33502904927397414 0.13137690743508487 0.03156655062496148 4.7029895073443785e-11 10.327625990190242 -0.3944601169793617 RGQSS(ph)PPPAPPICLR ddPTM_A549_PD325901_60min_R1 1 RGQSSPPPAPPICLR 15 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 RGQS(0.198)S(0.802)PPPAPPICLR 89.48899999999999 1.439e-05 15811000.0 1171.5 1183.5 1120.5 1381.8 1031.3 1581.4 1144.5 1362.1 1593.8 1403.7 1480.5 True False 1290.4298175872816 1283.2376984936109 1196.543868113869 1467.1506477045075 958.8650457918552 1568.5216027114998 1188.0545737944308 1334.9318469532207 1526.8181285887972 1315.0701424430595 1298.4078856627493 0.993855499366907 0.988316316207988 0.9215469817507418 1.129961288671338 0.7384929315200666 1.2080345629685356 0.9150087479544299 1.0281298055054775 1.1759156313267922 1.01283283701855 1.0 10.342527951653828 -8.527930443312835 24.89202367198054 1.0840687184041917 0.9862549827403432 0.06791386116184517 0.12102848745506077 207.98624750823066 1024838.6859772245 0.019652389831030705 0.022320614731165794 2.9653062755138256e-09 8.527930443312835 -0.09781373566384854 RGRPPAEKLS(ph)PNPPK ddPTM_A549_MK2206_60min_R1 2 RGRPPAEKLSPNPPK 15 3 A0A0U1RRJ4;A0A0U1RRD6;F6VDE0;A0A0U1RQZ9;B1ALF6;B4DNT1;A0A1W2PS06;A0A0U1RRG6;A0A0U1RR26;B1ALG2;F6T8Q0;A0A0U1RQX3;A0A0U1RR83;B1ALG1;A0A0U1RRN2;A0A0U1RQW7;F6XE55;A0A0U1RR09;A0A0U1RQU0;F6UH26;A0A0A0MSS5;A0A0U1RRF8;P51531-2;P51531 A0A0U1RRJ4 SMARCA2 Probable global transcription activator SNF2L2 1 RGRPPAEKLS(1)PNPPK;RGRPPAEKLS(1)PNPPK 51.193000000000005 0.0064595 11534800.0 2668.5 2953.0 3480.1 2235.75 3481.8 3016.8 2552.8 2364.4 3622.9 4442.1 4518.9 True False 3118.8775614388114 3103.295086717201 3973.6305098715147 2783.5088503666316 2969.63183231257 3336.0357736102333 3016.6107160215743 2699.5609406713183 2802.31893458248 3438.626524827565 3396.7324147046984 0.9181993694696016 0.9136118798415835 1.169839135007922 0.8194666257243644 0.8742613399444775 0.9821308735325441 0.88809195065306 0.7947523122471247 0.8250043254661569 1.012333650405167 1.0 11.72993185578356 RGRPPAEKLS(ph)PNPPK ddPTM_A549_PD325901_60min_R1 2 RGRPPAEKLSPNPPK 15 3 A0A0U1RRJ4;A0A0U1RRD6;F6VDE0;A0A0U1RQZ9;B1ALF6;B4DNT1;A0A1W2PS06;A0A0U1RRG6;A0A0U1RR26;B1ALG2;F6T8Q0;A0A0U1RQX3;A0A0U1RR83;B1ALG1;A0A0U1RRN2;A0A0U1RQW7;F6XE55;A0A0U1RR09;A0A0U1RQU0;F6UH26;A0A0A0MSS5;A0A0U1RRF8;P51531-2;P51531 A0A0U1RRJ4 SMARCA2 Probable global transcription activator SNF2L2 1 RGRPPAEKLS(1)PNPPK;RGRPPAEKLS(1)PNPPK 48.848 0.0045905 11449200.0 1970.33 1879.42 1736.29 1993.52 1853.62 1769.6399999999999 1799.76 1942.8 2148.17 2389.1 2668.7 True False 2170.3564511197155 2037.8053192250625 1854.1250805599545 2116.6552027875878 1723.4281258418482 1755.2286385622713 1868.2508516664602 1904.0493299028835 2057.889885362402 2238.251818273642 2340.466818283134 0.9273177616385929 0.8706832770737202 0.7922031049857229 0.9043730875621963 0.7363608457846376 0.7499480978969107 0.7982385552626329 0.8135339988710509 0.8792647130421535 0.9563270885914663 1.0 11.192580596202998 -9.75955037290521 0.8018704826594202 0.9861022261900743 0.8220352566150176 0.4952003052086259 0.05817258769745634 0.30893084716553837 0.4163487785621409 0.023314610059690637 0.012817490474892626 1.739600913678336e-10 9.75955037290521 -0.16406696957505662 RGRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK ddPTM_A549_MK2206_60min_R1 3 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 33 2 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 RGRS(0.997)PQPPAEEDEDDFDDT(0.003)LVAIDTYNCDLHFK;RGRS(0.969)PQPPAEEDEDDFDDT(0.031)LVAIDTYNCDLHFK;RGRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK 140.39 7.4548e-32 12147800.0 2082.83 1956.86 1708.75 1779.39 2826.12 2644.91 2519.84 2426.04 3834.3999999999996 3553.7 3371.07 True False 2434.3607836955607 2056.455815575149 1951.0764442811846 2215.340629879853 2410.401491738527 2924.7926206508346 2977.662310662725 2769.938599435902 2965.9145222785774 2750.916701848161 2533.940282201103 0.9607017185033885 0.8115644358393529 0.7699772792539473 0.8742671030729664 0.9512463686179439 1.154246862562293 1.1751114781900793 1.0931349167509976 1.170475304059747 1.0856280714944797 1.0 11.307166809303586 -6.996110663914584 2.980907885848676 1.0956460335932707 0.845157059051438 0.776113627322551 0.0649834599709578 0.1174476573367612 2.13494586646642 0.012088108262541827 0.02336327883966176 1.0089957480026949e-07 6.996110663914584 -0.2504889745418327 RGRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK ddPTM_A549_PD325901_60min_R1 4 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 33 2 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 RGRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;RGRS(0.894)PQPPAEEDEDDFDDT(0.106)LVAIDTYNCDLHFK;RGRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;RGRS(0.998)PQPPAEEDEDDFDDT(0.002)LVAIDTYNCDLHFK 206.2 1.4907999999999996e-89 66451400.0 8115.0 8769.6 9889.7 8723.8 9242.7 9044.6 9864.78 10497.199999999999 8518.5 9730.300000000001 10199.499999999998 True False 8938.828826052742 9508.64496891388 10560.874513597257 9262.649312812699 8593.524637583998 8970.943776327576 10240.18960111475 10287.8251111059 8160.497068881714 9115.927197416613 8945.026159957593 0.9993071754297832 1.0630091850909644 1.1806421048686262 1.0355083537124739 0.9607042488095684 1.0028974332669929 1.1447914648874873 1.1501168277359932 0.9122943771156508 1.0191057057187891 1.0 13.126869986143955 -8.773917669747641 24.99796082588236 0.9585834556055229 1.0666161117270883 0.23418441906203213 0.07032085829506035 201.60643427052997 403880.3303892976 0.012925315764334838 0.013805390176720956 1.682993079888098e-09 8.773917669747641 0.10803265612156532 RGRS(ph)PS(ph)PKPR ddPTM_A549_MK2206_60min_R1 1 RGRSPSPKPR 10 3 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGRS(1)PS(1)PKPR 40.066 0.034668 26860000.0 985.97 970.03 1016.2 920.93 1246.4 628.63 825.16 1088.2 1440.5 1520.4 1607.8 True False 1152.3776313478822 1019.4003836668755 1160.31244048488 1146.5578913421189 1063.0562110960964 695.151209349178 975.0808909559546 1242.4556824727315 1114.2290500058132 1176.940584036341 1208.5388869774092 0.9535296247107217 0.8434982065131768 0.9600952464068865 0.9487141073380712 0.8796210221706897 0.5751997034102654 0.806826244039743 1.02806429802201 0.9219637547555729 0.9738541280867706 1.0 10.239048179897862 -8.256159641649107 24.921655598133206 0.9669885120733099 0.8503684900632088 0.25917477813238143 0.10346941743581584 524.6120958291444 2476297.855798739 0.017736346963732046 0.02255099979775363 5.544218764005888e-09 8.256159641649107 -0.11662002201010113 RGRS(ph)PS(ph)PKPR ddPTM_A549_PD325901_60min_R1 2 RGRSPSPKPR 10 3 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGRS(1)PS(1)PKPR;RGRS(1)PS(1)PKPR 59.185 0.0032548 640960000.0 10414.5 10489.0 10530.0 11460.599999999999 12872.7 10690.5 11148.5 11606.1 11629.2 12259.1 13066.1 True False 11471.77237325031 11372.944841148696 11244.62912203394 12168.495233088921 11968.565960404167 10603.440112423978 11572.762268193284 11374.607230690692 11140.465165632359 11485.058333848901 11459.052532832186 1.0011100254913465 0.9924856185590584 0.9812878586441693 1.0619111133511308 1.0444638355668705 0.9253330571653521 1.0099231358818979 0.9926306907225058 0.9721977566393889 1.0022694547339062 1.0 13.48420014243199 -7.16930137199633 24.583809210722556 0.9851050083293186 1.0155253410553489 0.22608149325019022 0.0298912734960341 67.68280905686666 18055.115279876638 0.0043805808989207705 0.007587388613031352 6.771714317971067e-08 7.16930137199633 0.030420332726030286 RGRS(ph)PSPKPR ddPTM_A549_PD325901_60min_R1 1 RGRSPSPKPR 10 3 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGRS(0.988)PS(0.012)PKPR 40.066 0.030444 10584000.0 961.92 1300.7 1256.2 984.5 1512.9 1153.3 1311.0 1217.4 1409.5 1145.0 1435.5 True False 1059.5734102719236 1410.3145538070467 1341.4532861442592 1045.310329038274 1406.6391232216602 1143.907907175396 1360.8908224067275 1193.118001968176 1350.2636166682832 1072.7045045930781 1258.9426003842464 0.8416375853422765 1.120237374902239 1.0655396725274286 0.8303081718890369 1.1173179164739797 0.9086259427763107 1.0809792455917888 0.9477143768143362 1.0725378712708304 0.8520678419061156 1.0 10.297996791683456 -8.198791018453727 1.3894986544949246 1.0315126104742898 0.9927628770823281 0.0 0.11283114249121631 1.332689181206527 5.032045686930574 0.016670031347854487 0.022237435901215474 6.327162397931125e-09 8.198791018453727 -0.03874973339196164 RGS(ph)ALGPDEAGGELER ddPTM_A549_MK2206_60min_R1 2 RGSALGPDEAGGELER 16 1 O75145-2;O75145;R4GNF1;R4GN36 O75145-2 PPFIA3 Liprin-alpha-3 1 RGS(1)ALGPDEAGGELER;RGS(1)ALGPDEAGGELER 108.08 2.7883e-07 12678800.0 546.85 579.54 637.05 313.109 580.19 663.6 424.93 455.68 670.6600000000001 581.1700000000001 674.36 True False 639.1449108011296 609.0361105845196 727.3932692490587 389.8207190559969 494.8448195730454 733.8217115379704 502.1342806169881 520.2740354614726 518.7565808239494 449.8832933599057 506.8978006108254 1.2608950167685535 1.2014968497606713 1.4349899888548152 0.7690321768732327 0.9762220687814075 1.447671918587328 0.9906026027572085 1.0263884255061444 1.02339481488938 0.8875226777819597 1.0 8.985551093976845 -2.0000000381289595 0.24379053980208543 0.997474918280366 2.823244130103725 0.20925405328432134 0.184189183305281 54.86454572123927 0.6612815451412196 0.08708998129238185 41.38339596361632 0.0099999991220483 2.0000000381289595 1.825769211823359 RGS(ph)ALGPDEAGGELER ddPTM_A549_PD325901_60min_R1 2 RGSALGPDEAGGELER 16 1 O75145-2;O75145;R4GNF1;R4GN36 O75145-2 PPFIA3 Liprin-alpha-3 1 RGS(1)ALGPDEAGGELER;RGS(1)ALGPDEAGGELER 129.02 2.1932e-10 15577700.0 375.61 553.52 637.03 787.6500000000001 488.49 406.51 395.53999999999996 707.95 454.7 656.04 596.69 True False 413.7416506905324 600.1670729786088 680.2626865725817 836.3013516170618 454.18014759901394 403.19951733796114 410.59249114779317 693.8293818739692 435.59054026184356 614.6175224395129 523.3009127295547 0.7906381216352985 1.1468871129005254 1.2999455380735134 1.5981270647033394 0.8679139220873806 0.7704926697621436 0.7846202465157748 1.3258707657415163 0.8323901787019422 1.1745011474060836 1.0 9.031496965045438 RGS(ph)ASGSEPAGDSDR ddPTM_A549_MK2206_60min_R1 4 RGSASGSEPAGDSDR 15 1 A0A0C4DG27;P50747 A0A0C4DG27 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 RGS(0.999)AS(0.001)GS(0.001)EPAGDSDR;RGS(0.997)AS(0.003)GSEPAGDSDR;RGS(0.995)AS(0.003)GS(0.003)EPAGDSDR;RGS(0.928)AS(0.054)GS(0.018)EPAGDSDR 100.42 4.7966e-06 283185000.0 2360.62 2214.24 1964.81 1601.62 2396.81 1674.95 1313.04 1878.04 2203.8 3160.7599999999998 3422.1899999999996 True False 2759.034944382121 2326.935358216286 2243.449602626547 1994.0169718994543 2044.242424035008 1852.1920972581727 1551.602371734944 2144.2579212562837 1704.6428187454446 2446.7421207568436 2572.3657753608773 1.072567117324151 0.9045896118291499 0.8721347578618804 0.7751685203554357 0.7946935243873788 0.720034497037393 0.603181082020604 0.8335742691785214 0.6626751277260716 0.9511641556549594 1.0 11.328880084707166 -5.239343171332535 1.3240720161143478 0.8053089305972947 1.1952226351681938 0.359617983151045 0.10930757718226873 1.5717648951192744 2.2572117938792795 0.020075643250738507 0.8340996561967379 5.763108933943076e-06 5.239343171332535 0.38991370457089913 RGS(ph)ASGSEPAGDSDR ddPTM_A549_PD325901_60min_R1 5 RGSASGSEPAGDSDR 15 1 A0A0C4DG27;P50747 A0A0C4DG27 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 RGS(0.989)AS(0.01)GS(0.001)EPAGDSDR;RGS(0.782)AS(0.093)GS(0.126)EPAGDSDR;RGS(0.981)AS(0.009)GS(0.009)EPAGDSDR;RGS(0.995)AS(0.002)GS(0.002)EPAGDSDR;RGS(0.886)AS(0.047)GS(0.067)EPAGDSDR 82.102 0.00024246 232935100.0 2272.01 2568.24 2571.61 2608.53 2842.46 2623.2599999999998 2494.4700000000003 3328.3500000000004 3693.24 3443.76 4286.54 True False 2502.6627826346394 2784.6745980390638 2746.134918947173 2769.6529736985376 2642.8154155546563 2601.8970402990794 2589.398420876362 3261.963448209935 3538.025966388059 3226.3204058842416 3759.322754615877 0.6657217126573529 0.7407383669358814 0.7304866057524155 0.7367425343561749 0.7030030641316127 0.692118557020502 0.6887938572704283 0.8676997590070551 0.9411338683394238 0.8582185187272922 1.0 11.87625706716052 -8.515167809775061 2.1155280683066304 0.974662429491975 0.7097203594804679 0.8370026352813323 0.04370158832568535 0.048657814311013646 0.42996767209653663 0.0053572613112562485 0.006306927684911219 3.053740931065456e-09 8.515167809775061 -0.26494207001150716 RGS(ph)DAS(ph)DFDLLETQSACSDTSESSAAGGQGNSR ddPTM_A549_PD325901_60min_R1 1 RGSDASDFDLLETQSACSDTSESSAAGGQGNSR 33 1 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 2 RGS(0.854)DAS(0.503)DFDLLET(0.503)QS(0.127)ACS(0.009)DT(0.003)S(0.001)ESSAAGGQGNSR 63.403 0.00025806 2469700.0 218.84 0.0 172.92 174.22 235.08 244.34 141.51 317.25 265.63 192.92 163.95 True False 241.05647569850686 0.0 184.6553910524321 184.98117371767205 218.56879178197354 242.3501760506688 146.89524048724323 310.9221998721896 254.46649485320768 180.73899827606684 143.78518936467933 1.6765042127330683 0.0 1.2842448646368894 1.2865106241819402 1.5201064361894894 1.685501664820298 1.0216298433538655 2.162407694742497 1.7697684718264668 1.257007060843119 1.0 7.167771267981973 -5.978547320573521 24.981200069109377 1.4283570089604272 0.7892194083791263 0.1943881699252129 0.48038554991944976 265.32561651576555 308962.46085707296 0.06579514731256833 0.2045419377152285 1.0506369715948949e-06 5.978547320573521 -0.6391376005813009 RGS(ph)DASDFDISEIQSVCSDVETVPQTHRPTPR ddPTM_A549_PD325901_60min_R1 1 RGSDASDFDISEIQSVCSDVETVPQTHRPTPR 32 2 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-8;A0A0U1RQJ2;H0YC65;A0A494C1U5;A0A494C073;F6QMI7 F8W9J4;F6QMI7 DST Dystonin 1 RGS(0.985)DAS(0.015)DFDISEIQSVCSDVETVPQTHRPTPR 156.72 3.1024999999999996e-51 6370700.0 475.99 919.42 751.66 911.22 995.15 933.13 666.95 759.16 550.42 1012.8 984.38 True False 524.3121543946822 996.9027501047703 802.672167698769 967.503989869229 925.2540970811252 925.5308986582653 692.3311472190438 744.0179582505014 527.2877615371099 948.8516351544702 863.3075004989515 0.6073295483841554 1.1547481627677356 0.9297639221654647 1.1206945257744856 1.071754961640402 1.072075590821754 0.8019519659204961 0.8618226504698426 0.610776300718298 1.0990888352134993 1.0 9.753730712594479 -7.771301687276496 24.80935008134583 0.8147072544129628 1.0066391686296436 0.04860577913822928 0.1829062281663745 229.5840022713824 577534.5345498945 0.0287958630005414 0.04005253781364712 1.6931612194004573e-08 7.771301687276496 0.19193191421668088 RGS(ph)DASDFDLLETQSACSDTSESSAAGGQGNSR ddPTM_A549_MK2206_60min_R1 2 RGSDASDFDLLETQSACSDTSESSAAGGQGNSR 33 1 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RGS(0.799)DAS(0.201)DFDLLETQSACSDTSESSAAGGQGNSR;RGS(0.706)DAS(0.294)DFDLLETQSACSDTSESSAAGGQGNSR 217.22 2.2109999999999995e-101 110723000.0 2592.4 2620.8 3258.69 3111.2 4134.5 3382.5 3055.8 3117.3 4727.799999999999 4760.8 3916.9 True False 3029.93374190518 2754.1875256581234 3720.8212425542947 3873.4441396670763 3526.32052693903 3740.433904878219 3610.999305084115 3559.1868213308644 3656.9608487452183 3685.3319734808024 2944.2256290594682 1.0291105790262043 0.9354539606184827 1.263769055547183 1.315607099345999 1.1977072993775657 1.270430454772279 1.2264682670524973 1.2088702666676552 1.2420790080254254 1.2517152004610734 1.0 11.523672520408939 -3.8439824758687435 15.78858276517111 1.1487938160994295 1.1641938875319298 0.0 0.12400476068035392 0.0 0.0 0.018412592838140663 0.0 0.00014322456903718479 3.8439824758687435 0.015400071432500217 RGS(ph)DASDFDLLETQSACSDTSESSAAGGQGNSR ddPTM_A549_PD325901_60min_R1 2 RGSDASDFDLLETQSACSDTSESSAAGGQGNSR 33 1 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RGS(0.954)DAS(0.046)DFDLLETQSACSDTSESSAAGGQGNSR;RGS(0.936)DAS(0.064)DFDLLETQSACSDTSESSAAGGQGNSR 181.87 3.1254999999999994e-76 98047000.0 4255.3 4749.5 4598.9 4870.7 5883.7 4651.299999999999 4823.0 4747.9 4492.6 4530.4 5602.5 True False 4687.294923413706 5149.7570333717 4911.00900943228 5171.552076837711 5470.449209663085 4613.421354933598 5006.541904246867 4653.199409844507 4303.791645437339 4244.349770837099 4913.428017173626 0.9539765123312013 1.0480986015002247 0.9995076741263145 1.0525344136032682 1.1133671218022394 0.9389414760547153 1.018950900826833 0.9470372606620963 0.8759244320654622 0.8638265903157762 1.0 12.26251420487403 -7.884171818451502 1.6148822214868588 0.9411553570184031 1.0288230901111297 0.37562328165696246 0.05721230490732444 0.35272099132220736 1.8677864638189994 0.010281888606158052 0.015300159454024043 1.305654234385372e-08 7.884171818451502 0.08766773309272657 RGS(ph)DYETFK ddPTM_A549_PD325901_60min_R1 1 RGSDYETFK 9 1 H7C3J0;Q6NUM9 H7C3J0 RETSAT All-trans-retinol 13,14-reductase 1 RGS(0.995)DY(0.002)ET(0.003)FK 63.727 0.0092282 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RGS(ph)EDFETR ddPTM_A549_MK2206_60min_R1 4 RGSEDFETR 9 1 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 RGS(1)EDFETR;RGS(1)EDFETR;RGS(1)EDFETR;RGS(1)EDFETR 110.31 0.00015353 26874800.0 3761.02 3422.9799999999996 2441.16 3081.96 3731.73 2713.15 2543.57 2726.77 4887.51 4426.31 4437.07 True False 4395.7882278893 3597.1950612703154 2787.3531954478153 3837.04033835444 3182.7974603928383 3000.2537321567906 3005.7037444966304 3113.2979978828976 3780.496788749678 3426.4034967941943 3335.2230620978057 1.317989275693127 1.0785470699545154 0.8357321665000156 1.150459884365575 0.9542982286740683 0.8995661388446012 0.9012002161576825 0.9334602033858207 1.1335064307128537 1.0273386316293451 1.0 11.703567537772281 -5.298986320636848 4.088378111240257 1.0195745172034651 1.333787005677909 0.46571708400057865 0.09780580991270386 0.15675742023791583 5.246358465712404 0.014720880343070489 0.13253037722016772 5.02358412507064e-06 5.298986320636848 0.31421248847444394 RGS(ph)EDFETR ddPTM_A549_PD325901_60min_R1 4 RGSEDFETR 9 1 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 RGS(0.974)EDFET(0.026)R;RGS(1)EDFETR;RGS(1)EDFETR;RGS(1)EDFETR 150.51 9.394400000000001e-06 29921900.0 3460.0299999999997 4017.0800000000004 3932.85 3883.09 3991.0699999999997 4118.78 3821.56 4129.33 4580.97 4569.889999999999 5006.6 True False 3811.28969846054 4355.613429543485 4199.7568511482605 4122.939650162757 3710.7510116440426 4085.2380212571566 3966.9915570378703 4046.967273753281 4388.4477616522945 4281.346365497693 4390.8199394522935 0.8680132073318307 0.9919817914662198 0.956485783762778 0.9389908279128951 0.8451157330097481 0.9304043612789882 0.9034739779223807 0.9216882790821287 0.9994597414986927 0.9750676239371693 1.0 12.100274657708734 -8.761148016036437 9.578646950585126 0.999767531077929 0.9211363520305675 0.4062560740216169 0.0383721829903879 0.06242610434166159 87.59995680723965 0.006372218604447502 0.006999690500097209 1.7332131841956588e-09 8.761148016036437 -0.0786311790473615 RGS(ph)FDATGSGFSMTFSSSSYSSSGYGR ddPTM_A549_MK2206_60min_R1 2 RGSFDATGSGFSMTFSSSSYSSSGYGR 27 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RGS(0.977)FDAT(0.023)GSGFSMTFSSSSYSSSGYGR;RGS(0.901)FDAT(0.088)GS(0.011)GFSMTFSSSSYSSSGYGR 131.4 9.930200000000002e-25 71298000.0 2826.7 2268.5 2421.0 1870.4499999999998 3677.1 2574.9 2527.0 2611.2 3906.3 4478.4 3943.3 True False 3303.7778538201574 2383.956960453086 2764.3342043041694 2328.7103339676905 3136.2034610249157 2847.374208919711 2986.123189982184 2981.345596464618 3021.5292870792855 3466.7263296161177 2964.0697804565334 1.114608662590697 0.8042850327517941 0.9326144149947778 0.7856462588438173 1.058073423811861 0.9606299513235991 1.0074402464041363 1.0058284106946442 1.0193853420731216 1.1695832373697235 1.0 11.533363696790843 -6.788264748062096 24.99418706860543 1.0080528999942022 0.9034543187730232 0.2536578100577528 0.09543748521785836 194.23889754906327 180979.11978264205 0.010426643987092633 0.0197082613565032 1.6283031084040885e-07 6.788264748062096 -0.10459858122117904 RGS(ph)FDATGSGFSMTFSSSSYSSSGYGR ddPTM_A549_PD325901_60min_R1 4 RGSFDATGSGFSMTFSSSSYSSSGYGR 27 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RGS(0.894)FDAT(0.052)GS(0.052)GFS(0.001)MTFSSSSYSSSGYGR;RGS(0.91)FDAT(0.038)GS(0.051)GFS(0.001)MTFSSSSYSSSGYGR;RGS(0.921)FDAT(0.072)GS(0.006)GFSMTFSSSSYSSSGYGR;RGS(0.831)FDAT(0.151)GS(0.018)GFSMTFSSSSYSSSGYGR 142.48 4.4876e-33 89600000.0 10150.6 9565.8 8556.89 11161.0 11664.3 11519.6 9435.0 10732.4 12267.8 12623.1 13414.600000000002 True False 11181.081439523221 10371.943537178024 9137.612012159649 11850.389621529897 10845.039807650472 11425.788196911213 9794.054088030105 10518.333862595076 11752.227028423673 11826.075311728273 11764.689242155704 0.9503932666116436 0.881616447633216 0.776698119608412 1.0072845425501855 0.9218296875016547 0.9711933704096384 0.83249577497854 0.8940596428935295 0.9989407103345003 1.0052178232938451 1.0 13.522175592612976 -8.76500262547666 24.797338180630735 0.9994997881898064 0.9032610132432367 0.34081280183652496 0.060010788802384904 65.6112249573094 456600.1558526302 0.010070176096546523 0.010927759388868507 1.7178980017741012e-09 8.76500262547666 -0.09623877494656974 RGS(ph)FSSENYWR ddPTM_A549_MK2206_60min_R1 3 RGSFSSENYWR 11 1 Q6P6C2-3;Q6P6C2;K7ER58;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 RGS(0.999)FS(0.001)SENYWR;RGS(1)FSSENYWR;RGS(1)FSSENYWR 140.01 4.1038999999999994e-09 121790000.0 14440.6 13222.0 10938.099999999999 10092.1 17785.3 15095.4 15025.4 15446.2 22461.1 18867.4 20547.2 True False 16877.82024122664 13894.94332427186 12489.287054977041 12564.66495305158 15169.105930044445 16692.785208484453 17755.320688072137 17635.746152003598 17373.6967130063 14605.241236021619 15444.76316612901 1.0927859533800026 0.89965402349089 0.8086421863927672 0.8135226690044945 0.9821520580717551 1.0808055150429503 1.1496013565951126 1.1418592802173555 1.1248924004938785 0.9456435866916693 1.0 13.914830128037119 -7.046070252027672 4.003764759800382 1.075635398935883 0.8960236846725291 0.4386549564538812 0.08974658967242197 0.15472266976393734 5.207853721309695 0.013347358158096866 0.024419029216301586 8.993520894251941e-08 7.046070252027672 -0.17961171426335376 RGS(ph)FSSENYWR ddPTM_A549_PD325901_60min_R1 4 RGSFSSENYWR 11 1 Q6P6C2-3;Q6P6C2;K7ER58;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 RGS(1)FSSENYWR;RGS(0.999)FS(0.001)SENYWR;RGS(0.999)FS(0.001)SENYWR;RGS(0.98)FS(0.014)S(0.006)ENYWR 165.78 2.3728e-14 163645000.0 32125.0 28743.7 31277.5 30952.5 32640.300000000003 33071.399999999994 28021.5 28170.3 36462.2 34323.7 38038.3 True False 35386.30635082496 31166.03247502394 33400.17923688669 32864.36562677214 30347.75793092203 32802.07748318773 29087.87351645316 27608.42126732717 34929.82053471607 32156.495724280692 33359.830244650715 1.0607459957473613 0.9342383413363277 1.0012095083200383 0.9851478675327484 0.9097096030873336 0.9832807074444744 0.8719430915304922 0.8275947768575413 1.04706229853544 0.9639286377794749 1.0 15.025824327030357 RGS(ph)GDTSISIDTEASIR ddPTM_A549_MK2206_60min_R1 1 RGSGDTSISIDTEASIR 17 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3;Q32MZ4-4 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RGS(0.965)GDT(0.034)S(0.001)ISIDTEASIR 108.25 3.4953e-09 12248000.0 499.5 623.96 759.03 617.67 704.92 559.81 529.59 739.05 711.37 1011.0 812.71 True False 583.8033883974839 655.716898851359 866.6718674485725 768.99917772826 601.2272018018771 619.0487226281964 625.8096478760048 843.8126007457015 550.2458308244604 782.6143978300056 610.891677345074 0.9556577868840588 1.0733767100921965 1.4186997459436923 1.2588142976023489 0.9841797230153821 1.0133526868766207 1.024419993075964 1.3812802368054815 0.9007256952915459 1.2811017515105723 1.0 9.254772775364303 RGS(ph)GDTSISIDTEASIR ddPTM_A549_PD325901_60min_R1 3 RGSGDTSISIDTEASIR 17 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3;Q32MZ4-4 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RGS(0.98)GDT(0.016)S(0.004)ISIDTEASIR;RGS(0.529)GDT(0.42)S(0.051)ISIDTEASIR;RGS(0.975)GDT(0.019)S(0.006)ISIDTEASIR 76.693 0.00019569 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RGS(ph)GDTSSLIDPDTSLSELR ddPTM_A549_MK2206_60min_R1 4 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.968)GDT(0.01)S(0.01)S(0.01)LIDPDTSLSELR;RGS(0.991)GDT(0.009)SSLIDPDTSLSELR;RGS(0.989)GDT(0.011)SSLIDPDTSLSELR;RGS(0.955)GDT(0.042)S(0.002)S(0.002)LIDPDTSLSELR 187.72 3.0739e-44 476934700.0 7208.8 7630.900000000001 6230.4 6284.8 8871.9 7804.5 7115.0 7206.66 10611.600000000002 9916.9 9579.7 True False 8425.469201761325 8019.28021579082 7113.964405822668 7824.576282135393 7566.855262534864 8630.367009792182 8407.703401948247 8228.226124470631 8208.08954324311 7676.665402413832 7200.796103730244 1.1700746806865787 1.1136657808761694 0.9879413752789648 1.0866265575943763 1.0508359289072204 1.1985295633244462 1.167607481288463 1.1426828375557176 1.1398863993650723 1.0660856510625365 1.0 12.813940701135316 -10.765807006373628 1.0236392685048565 1.000248846492364 1.1162175130276668 0.20572099245127762 0.059506638823704376 0.4944900108711473 0.9230939226842172 0.04102797624230437 0.010505821413778493 1.7147191323950844e-11 10.765807006373628 0.1159686665353028 RGS(ph)GDTSSLIDPDTSLSELR ddPTM_A549_PD325901_60min_R1 4 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.916)GDT(0.041)S(0.041)S(0.002)LIDPDTSLSELR;RGS(1)GDTSSLIDPDTSLSELR;RGS(0.99)GDT(0.01)S(0.001)SLIDPDTSLSELR;RGS(0.997)GDT(0.003)SSLIDPDTSLSELR 213.5 1.2682999999999998e-66 705068000.0 8039.3 8866.2 8110.5 7786.2 9893.7 8781.1 9179.199999999999 9259.3 8899.1 9416.3 10172.7 True False 8855.443817780138 9613.38578993161 8660.927302398506 8267.135890256792 9198.80064341208 8709.589632964426 9528.519479050969 9074.615997719671 8525.10177445387 8821.753211004188 8921.5223900584 0.9925933524134966 1.0775499258561723 0.9707902893400474 0.926650803395302 1.031079701561099 0.9762447766392269 1.0680373889627817 1.0171600317712444 0.9555658106013074 0.9888170230716017 1.0 13.12307420076979 -8.742916142262736 24.98837113788848 0.9790171852128291 1.0076890579360664 0.07014079653929295 0.04198582985334251 473.25691780300133 638436.662056703 0.0072920119071782355 0.008261338506458403 1.8075231061873694e-09 8.742916142262736 0.028671872723237346 RGS(ph)GEPTPQK ddPTM_A549_MK2206_60min_R1 2 RGSGEPTPQK 10 1 Q9H6A9;Q9H6A9-2 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 RGS(1)GEPTPQK;RGS(1)GEPTPQK 83.53 0.00040551 10654000.0 1851.6 2828.3 2538.5 1830.3 2672.7 1789.3 1981.6 2035.3 2887.0 3597.0 3426.1 True False 2164.1048127262893 2972.2483893539647 2898.497471138426 2278.7235821652894 2279.5493705042804 1978.6425383587855 2341.6310697541317 2323.810007844835 2233.099109591659 2784.435201775004 2575.3048144503678 0.8403295798552536 1.1541345990099097 1.125496855702122 0.8848364548456855 0.8851571113886926 0.7683139204556939 0.9092636555544561 0.9023436739626459 0.867120310210058 1.081206071666227 1.0 11.33052748521819 -6.273726233776038 24.417190562775644 0.9129105049729783 1.0514017726413372 0.2250225760298834 0.10496399766283683 518.3979256668655 1030192.3347843998 0.013662481970385484 0.03196587809678208 5.324437901073426e-07 6.273726233776038 0.13849126766835884 RGS(ph)GEPTPQK ddPTM_A549_PD325901_60min_R1 2 RGSGEPTPQK 10 1 Q9H6A9;Q9H6A9-2 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 RGS(1)GEPTPQK;RGS(0.999)GEPT(0.001)PQK 92.295 0.00026059 40749000.0 6554.5 6722.700000000001 6661.4 6053.1 7825.0 7246.3 6240.700000000001 7244.4 7328.2 7631.7 8641.4 True False 7219.908014832125 7289.2455223176985 7113.482662252315 6426.986239412472 7275.398994784513 7187.288535303112 6478.193253542075 7099.904758878142 7020.221238501959 7149.833159565927 7578.562582347909 0.9526751196392881 0.9618242830501801 0.9386321726525206 0.8480481845438996 0.959997217906529 0.9483709420100116 0.8548050086214464 0.9368405527738647 0.9263262211297898 0.9434286623454712 1.0 12.887708524619223 -10.497164248498896 0.7598655897330857 1.001451208926976 0.9242110985703869 0.11142559438479227 0.04039222986993233 0.6043049561201175 0.6118031130660299 0.027102738016672786 0.007242527694837665 3.1829934981910383e-11 10.497164248498896 -0.07724011035658918 RGS(ph)GLGK ddPTM_A549_PD325901_60min_R1 1 RGSGLGK 7 1 Q14669-3;Q14669;Q14669-2;G5E9G6;Q14669-4;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RGS(1)GLGK 45.997 0.053054 5552000.0 3191.0 2970.5 2491.3 2910.5 3656.0 3140.3 2503.9 2996.8 2670.0 2950.8 4228.9 True False 3514.947970909957 3220.8344599706547 2660.37459940391 3090.274974774909 3399.215172515295 3114.7264379631456 2599.1872846866536 2937.0264730558793 2557.78918517511 2764.485984413321 3708.772109205808 0.9477390002435722 0.8684368748287314 0.7173195119755146 0.8332339879024426 0.9165338479756845 0.8398268608178595 0.7008215140086459 0.7919134383494947 0.6896593022866622 0.7453911707196549 1.0 11.856725906771135 -11.030264304872011 1.3434644930007118 0.9992482169818178 0.7975300762383718 0.0 0.10960211144203554 0.3430405110868476 1.1099626598799561 0.061896113386997895 0.01414593655398137 9.326865095258822e-12 11.030264304872011 -0.20171814074344596 RGS(ph)GSPEDTPR ddPTM_A549_MK2206_60min_R1 2 RGSGSPEDTPR 11 1 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 RGS(0.5)GS(0.5)PEDTPR;RGS(0.5)GS(0.5)PEDTPR 74.76 0.0011091 18941700.0 881.15 852.44 801.6500000000001 898.1800000000001 1021.0 690.9300000000001 899.85 835.74 1310.1200000000001 1518.5700000000002 1303.98 True False 1029.8665779508376 895.8255549343754 915.3360243207093 1118.234140320833 870.8122525105217 764.0437539977847 1063.3410971529354 954.208704346408 1013.3799118317369 1175.5239823073305 980.1657779828345 1.0507065244312923 0.913953103706569 0.9338583787371726 1.1408622555891932 0.8884336426258825 0.7795046217285555 1.0848584199106344 0.9735176699498266 1.033886241077766 1.1993113906981532 1.0 9.93688196639758 RGS(ph)GSPEDTPR ddPTM_A549_PD325901_60min_R1 2 RGSGSPEDTPR 11 1 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 RGS(0.49)GS(0.49)PEDT(0.02)PR;RGS(0.5)GS(0.5)PEDTPR 108.35 9.8015e-05 27068000.0 722.96 994.6300000000001 816.1 663.7 1068.97 949.54 630.62 876.66 837.03 887.76 853.3 True False 796.354366984977 1078.4509607542889 871.4854536079683 704.6952416279358 993.8892349463003 941.8072610589836 654.6185891885053 859.1743285735339 801.8525399502328 831.7066820939303 748.3495095143693 1.064147643394274 1.441105989972699 1.1645433617956218 0.9416659363954655 1.3281083535302516 1.2585125654323686 0.8747498072301948 1.1480923253775936 1.0714947090305218 1.1113880232695743 1.0 9.547568414266728 -7.736484205998172 24.99972438381292 1.034170949366131 1.2031670735303335 0.24399546622610324 0.13863158693776131 231.8167686941525 232230.16290095053 0.02008329338028694 0.029781256516434967 1.8344918809317088e-08 7.736484205998172 0.1689961241642024 RGS(ph)IDSPK ddPTM_A549_PD325901_60min_R1 2 RGSIDSPK 8 1 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 RGS(1)IDSPK;RGS(1)IDSPK 93.166 0.0010735999999999999 31575000.0 10785.9 10931.7 10817.900000000001 10782.099999999999 14192.400000000001 14174.1 11676.7 13360.7 12024.3 14196.400000000001 15246.0 True False 11880.87662784008 11852.952723804485 11552.067747317291 11448.085829074224 13195.574785122013 14058.670829007875 12121.063208235408 13094.210357233616 11518.960486629618 13300.036881227215 13370.838652356822 0.88856629989667 0.8864778816035757 0.8639748072407601 0.8561980386365904 0.9868920812080911 1.0514427101047854 0.9065297640173736 0.9793110737242764 0.8614987276508058 0.9947047621341891 1.0 13.706802337250785 -6.750199027030238 24.935612273911875 0.9464766841603451 0.8740074023248587 0.40546897066292775 0.050920954940234034 247.26689277543218 548533.3068213479 0.008869307725204133 0.0183284053084272 1.7774646527737365e-07 6.750199027030238 -0.0724692818354864 RGS(ph)IGENQGEEK ddPTM_A549_MK2206_60min_R1 4 RGSIGENQGEEK 12 1 E7EX44;Q05682-3;Q05682-6;Q05682-2 E7EX44 CALD1 Caldesmon 1 RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK 137.32 9.7022e-09 123279800.0 8739.300000000001 9893.300000000001 9519.6 8072.0 10950.900000000001 8364.800000000001 8624.3 7945.62 12020.4 12732.3 13881.6 True False 10214.280184628898 10396.82671229911 10869.6224251524 10049.640362365853 9340.03711656951 9249.957583895144 10191.223675252606 9071.935967440715 9297.798592634415 9856.064587033612 10434.415607330262 0.9789029466540784 0.996397604193114 1.0417087869795412 0.9631244087408114 0.8951183725141308 0.8864854470045235 0.9766932867896491 0.869424442042313 0.8910703715982556 0.9445727444582183 1.0 13.349062182345657 -6.515392842313529 23.087082286898536 0.9354310578005938 1.0043549197628645 0.4215235202325912 0.04090704839343771 131.26117079143242 404816.78941885615 0.007360808684799506 0.015874614253920682 3.0521590250163773e-07 6.515392842313529 0.06892386196227074 RGS(ph)IGENQGEEK ddPTM_A549_PD325901_60min_R1 3 RGSIGENQGEEK 12 1 E7EX44;Q05682-3;Q05682-6;Q05682-2 E7EX44 CALD1 Caldesmon 1 RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK 163.34 1.4083000000000001e-14 141868500.0 10947.5 10663.6 9656.8 11672.8 11493.1 12326.0 12156.5 12287.2 13134.8 13991.5 14503.3 True False 12058.88214087645 11562.258995907452 10312.168519055782 12393.80234514776 10685.864305042534 12225.62114267228 12619.122259792048 12042.122156878077 12582.790033497393 13108.074302195666 12719.486043993622 0.9480636323800897 0.9090193547063457 0.8107378303957006 0.974394901042432 0.8401176170234173 0.9611725741422898 0.9921094465724134 0.9467459703345946 0.9892530240590358 1.030550625776703 1.0 13.634752756401124 -7.4701877961581635 6.206089811001618 0.9897377492488283 0.8966928391887733 0.4984986489741947 0.04578319621109055 0.13053193598589657 11.53441930827546 0.006116869718180768 0.009739085491628963 3.386976659643264e-08 7.4701877961581635 -0.093044910060055 RGS(ph)IGENQIK ddPTM_A549_MK2206_60min_R1 2 RGSIGENQIK 10 1 Q05682-5;Q05682-4;E9PGZ1;C9J813 Q05682-5 CALD1 Caldesmon 1 RGS(1)IGENQIK;RGS(1)IGENQIK 160.84 3.746300000000001e-09 30194000.0 4887.5 5262.4 5070.700000000001 4383.4 6668.3 5652.700000000001 4812.9 5835.5 6355.799999999999 5952.0 6269.5 True False 5712.390512097504 5530.233682472261 5789.801507544464 5457.333196778306 5687.401903443598 6250.864962041422 5687.341630813317 6662.699995469239 4916.221448127001 4607.43906615647 4712.610120602601 1.212150032765083 1.1734969668496809 1.228576385352269 1.1580277292449725 1.206847534146608 1.326412497973018 1.2068347444974035 1.4138025053974295 1.0432056381312453 0.9776830563626846 1.0 12.202310615211257 -8.910624662485812 9.990987702881913 1.0190156791999623 1.2359143572137092 0.6875190820805241 0.07018542028310129 0.1383224256224662 14.362936358721024 0.011746983869939385 0.012490844417587793 1.2285004998305396e-09 8.910624662485812 0.21689867801374696 RGS(ph)IGENQIK ddPTM_A549_PD325901_60min_R1 3 RGSIGENQIK 10 1 Q05682-5;Q05682-4;E9PGZ1;C9J813 Q05682-5 CALD1 Caldesmon 1 RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK 149.32 1.2663e-08 42118100.0 9198.9 7985.700000000001 8974.3 9097.1 9640.0 8293.3 8613.5 9388.9 8861.0 9117.9 10113.2 True False 10132.76555612774 8658.682964816584 9583.349964849878 9659.007205986885 8962.919656194596 8225.762114434849 8941.291455988057 9201.631024050437 8488.602984957544 8542.194237929454 8869.340512856817 1.1424485892090273 0.9762487923724579 1.0805031051585006 1.0890333043347904 1.0105508569889867 0.9274378520602461 1.0081123216576182 1.0374650754147885 0.9570726225532368 0.9631149267013552 1.0 13.114611120394443 -6.930807154210163 5.454668194369062 0.9826335482498301 1.0651430008259797 0.4574915755177046 0.045491920440026 0.1454527763098643 8.066037910292085 0.006254952120964272 0.011939927168915085 1.1727159872614426e-07 6.930807154210163 0.08250945257614961 RGS(ph)IGENQIKDEK ddPTM_A549_MK2206_60min_R1 4 RGSIGENQIKDEK 13 2 Q05682-5;Q05682-4;E9PGZ1;C9J813 Q05682-5 CALD1 Caldesmon 1 RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK 155.94 4.8312e-19 1139977000.0 69494.2 72720.9 73028.5 61294.7 92623.9 70956.9 67856.2 72306.3 97530.4 95723.6 103512.2 True False 81223.121989935 76422.0831939224 83385.03942132462 76311.90425162356 78999.04700813856 78465.51206062177 80184.7931951202 82555.9394537567 75439.92012404514 74099.57227707251 77807.2639486148 1.043901531399126 0.9821972823050661 1.0716870789389725 0.9807812327396733 1.0153171182103362 1.008459982765127 1.0305566489020301 1.0610312619176276 0.9695742568954346 0.9523477438560118 1.0 16.247617228507025 -8.78638778796874 24.998192011030785 0.9856322877336359 1.0223598757761998 0.3455227174308374 0.02956758440685607 214.06048829635117 214486.37534733876 0.004668837209768981 0.004971429412648996 1.635355636057528e-09 8.78638778796874 0.03672758804256393 RGS(ph)IGENQIKDEK ddPTM_A549_PD325901_60min_R1 8 RGSIGENQIKDEK 13 2 Q05682-5;Q05682-4;E9PGZ1;C9J813 Q05682-5 CALD1 Caldesmon 1 RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK 142.23 8.221799999999999e-13 2353214300.0 83559.70000000001 78598.0 86458.7 83853.0 102570.09999999999 92136.9 96114.99999999999 97040.8 92916.2 94746.90000000001 102950.49999999999 True False 92042.6192305999 85221.72929970504 92326.30730039872 89032.40936601965 95365.93002363545 91386.56763429174 99772.70892114611 95105.24511696525 89011.25523878938 88764.56456439279 90288.24115698936 1.0194308588929106 0.9438851417154657 1.0225728856525809 0.9860908599516728 1.0562386508096577 1.0121646679925091 1.105046544739592 1.0533513987895753 0.9858565644669098 0.983124307516997 1.0 16.46225048764157 -4.005529718170431 11.905676454293468 1.0076633431331523 1.0935335737559781 0.0 0.042619815505412606 0.0 0.0 0.0056827172667849105 0.0 9.873480705729947e-05 4.005529718170431 0.08587023062282584 RGS(ph)IGENQVEVMVEEK ddPTM_A549_MK2206_60min_R1 4 RGSIGENQVEVMVEEK 16 1 Q05682 Q05682 CALD1 Caldesmon 1 RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK 95.95700000000001 2.231e-06 10624700.0 2091.38 2335.16 1986.03 1789.1000000000001 3103.99 2222.28 1948.09 1856.34 3419.34 3148.5599999999995 3523.8100000000004 True False 2444.3538146681303 2454.009669725206 2267.6789177092955 2227.4295803157515 2647.397182830688 2457.4401945699237 2302.032736514597 2119.4818798028227 2644.864949563957 2437.2981092301093 2648.750724791555 0.9228327119610285 0.9264781493994025 0.856131494928709 0.8409359021472436 0.9994889885453553 0.9277732976414054 0.8691013144303177 0.8001817082917897 0.9985329781352287 0.9201689258327296 1.0 11.371096362031798 -8.852270106001036 14.999145867406284 0.9993424860160465 0.8949594256100587 0.2576739467880844 0.055694197742939565 0.6793381731071172 110.0741302096282 0.008847527193971487 0.009417721956146033 1.4051733159298302e-09 8.852270106001036 -0.10438306040598777 RGS(ph)ISSGVSYEEFQVLVR ddPTM_A549_MK2206_60min_R1 1 RGSISSGVSYEEFQVLVR 18 1 B4DFN3;Q13563-3;Q13563 B4DFN3 PKD2 Polycystin-2 1 RGS(0.769)IS(0.196)S(0.033)GVS(0.001)YEEFQVLVR 60.747 0.0013501 1738600.0 163.52 383.58 309.21 105.03 389.94 290.06 318.3 403.71 525.64 423.39 414.36 True False 191.1181783198331 403.1025835973527 353.06062755592393 130.76235471497586 332.5803425503945 320.75395667375506 376.13098985806425 460.9371288100227 406.5833792745962 327.7459049428743 311.4629762457764 0.6136144354089172 1.294223115877706 1.1335556855313764 0.41983273996518566 1.0678005667291715 1.0298301279335593 1.2076266476091788 1.4799098575565393 1.3053987481123919 1.0522788579668902 1.0 8.282916869360564 -7.388707356544938 2.419400243401161 1.180786027944019 0.9096362756944959 0.2441723421087244 0.2530637646229757 0.39664726772813486 4.535178723730726 0.040579633081322675 0.06899228202818453 4.085946195420511e-08 7.388707356544938 -0.2711497522495231 RGS(ph)ISSGVSYEEFQVLVR ddPTM_A549_PD325901_60min_R1 2 RGSISSGVSYEEFQVLVR 18 1 B4DFN3;Q13563-3;Q13563 B4DFN3 PKD2 Polycystin-2 1 RGS(0.995)IS(0.005)SGVSYEEFQVLVR;RGS(0.999)IS(0.001)SGVSYEEFQVLVR 154.13 7.172399999999999e-23 10490100.0 978.44 1264.58 1307.6100000000001 1414.3899999999999 1305.0 1350.02 1192.55 1346.3400000000001 1350.35 1147.15 1354.46 True False 1077.7705085105413 1371.1505946438963 1396.352277897702 1501.7536579872472 1213.3413020055957 1339.025884717705 1237.9331428383996 1319.4861925167029 1293.599485468618 1074.7187532261569 1187.8700066293607 0.9073135128386379 1.1542934723426541 1.175509331917488 1.2642407415004497 1.0214428306414698 1.127249511516211 1.0421452986687454 1.1108001592369603 1.0890076172049077 0.9047444141431974 1.0 10.214161249544482 -10.445430866657174 0.41396661129344503 0.9771974780583889 1.1136348537652938 0.24271556952382511 0.09202652866307305 2.483427599223961 0.6314577200652658 0.14334432895488197 0.02678317486261678 3.58566022211094e-11 10.445430866657174 0.13643737570690495 RGS(ph)ISSMSSVSSVLDEKDDDRIR ddPTM_A549_MK2206_60min_R1 3 RGSISSMSSVSSVLDEKDDDRIR 23 3 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 1 RGS(0.952)IS(0.046)S(0.002)MSSVSSVLDEKDDDRIR;RGS(0.974)IS(0.018)S(0.004)MS(0.004)S(0.001)VSSVLDEKDDDRIR;RGS(0.757)IS(0.226)S(0.015)MS(0.001)SVSSVLDEKDDDRIR 142.4 1.4861999999999998e-27 16000100.0 3029.9 3395.99 3323.48 3228.2200000000003 4410.700000000001 3467.72 3696.1 3311.33 5112.900000000001 4384.8 4939.2 True False 3541.2730460571333 3568.8313855539263 3794.799438794226 4019.134044920304 3761.8918728189587 3834.6718287137624 4367.633526906667 3780.7211680228174 3954.83631362355 3394.270634624144 3712.6603250148114 0.9538370699299041 0.9612598711248083 1.0221240583809903 1.0825482788825476 1.0132604503224925 1.032863632279224 1.1764161395209896 1.0183320953305186 1.0652297725641713 0.9142421707029185 1.0 11.858237612288507 -5.813820303781355 3.7079677927521906 1.0428514880809945 0.9552694788238303 0.20182909163859863 0.0602441900818261 0.19535430734943707 5.401370104931289 0.006737061684977285 0.02533068941366105 1.5352520862585369e-06 5.813820303781355 -0.0875820092571642 RGS(ph)ISSMSSVSSVLDEKDDDRIR ddPTM_A549_PD325901_60min_R1 1 RGSISSMSSVSSVLDEKDDDRIR 23 3 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 1 RGS(0.999)IS(0.001)SMSSVSSVLDEKDDDRIR 237.65 1.2861e-98 14974000.0 1848.6 1711.4 1455.7 2023.6 2486.9 2282.0 1425.2 2190.1 2283.7 1894.3 2716.7 True False 2036.2685111326068 1855.625684158822 1554.4925558352152 2148.593176070952 2312.2287233392467 2263.4161485946875 1479.436765899365 2146.416737399786 2187.7240307806746 1774.69357471674 2382.563122580203 0.8546545910302785 0.7788358959192095 0.6524454865866359 0.9017990565320793 0.9704795232603166 0.9499921018434613 0.6209433663596727 0.9008855702741334 0.9182229045883464 0.7448673900378475 1.0 11.218298721431964 -9.51796201371253 0.20860436791544779 1.0761855439044121 0.7624044783352472 0.0 0.13176804730789163 3.459341472802658 0.43165977441656117 0.364571238316626 0.18587288040477587 3.034156560126331e-10 9.51796201371253 -0.31378106556916496 RGS(ph)LEK ddPTM_A549_PD325901_60min_R1 3 RGSLEK 6 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 RGS(1)LEK;RGS(1)LEK;RGS(1)LEK 97.635 0.014427 410063000.0 23599.2 22120.7 16969.9 17041.8 18920.4 15544.000000000002 13603.1 14262.4 17060.0 21654.4 26423.0 True False 25994.973411187166 23984.889021603412 18121.579462298552 18094.43328126406 17591.496375836534 15417.414817596778 14120.77341440194 13977.925243363652 16343.027527748081 20287.137488436965 23173.138509197463 1.1217718049227432 1.0350298045335449 0.7820079897725577 0.7808365394304421 0.7591330957977244 0.6653140579761165 0.6093595569196368 0.6031951709008163 0.705257404872521 0.875459208099281 1.0 14.500165831823693 -5.678817970614844 3.862231307432375 0.7948886402132913 1.1031024272460859 0.5205782269495489 0.11573098619774785 0.19059229089574947 5.318920403195106 0.021813223009590623 0.09584638393060789 2.0949903622380826e-06 5.678817970614844 0.30821378703279456 RGS(ph)LEMS(ph)SDGEPLSR ddPTM_A549_MK2206_60min_R1 1 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 2 RGS(0.999)LEMS(0.552)S(0.441)DGEPLS(0.008)R 46.027 0.006456399999999999 3201800.0 295.83 454.15 323.77 268.28 453.93 197.65 322.13 320.45 461.67 412.31 429.1 True False 345.75887165090637 477.26429516851175 369.685454493003 334.00861204354675 387.1574983174351 218.56519181054833 380.6568512817412 365.8747688369664 357.10248213549716 319.16888463826854 322.54262744247177 1.07197884010719 1.4796937042178584 1.146159989531739 1.0355487418577565 1.20032970955595 0.6776319568784169 1.1801753284521581 1.134345471598861 1.1071481774891583 0.9895401645638142 1.0 8.333346030421769 -5.993314672651125 24.932701791571763 1.0514991677060188 1.2851089797893225 0.24534271982800004 0.15911067276752586 153.2669755183268 571590.4595521226 0.019788600400092095 0.061326033485822565 1.0155126258478753e-06 5.993314672651125 0.23360981208330367 RGS(ph)LEMSSDGEPLSR ddPTM_A549_MK2206_60min_R1 4 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(0.893)LEMS(0.088)S(0.018)DGEPLSR;RGS(0.975)LEMS(0.01)S(0.015)DGEPLSR;RGS(1)LEMSSDGEPLSR;RGS(1)LEMSSDGEPLSR 145.63 5.3061e-14 49753300.0 4255.9 4524.85 4153.349999999999 3398.87 5525.75 3972.9299999999994 3767.8099999999995 4161.63 5585.09 5388.12 6573.15 True False 4974.19187323494 4755.145537803023 4742.357483455895 4231.593302581071 4712.919494916764 4393.342815582504 4452.372305677391 4751.553796957354 4320.076032556034 4170.939949788142 4940.855445288939 1.0067470963915341 0.9624134100780081 0.9598251833045813 0.8564495256820065 0.9538671080552438 0.8891866730834063 0.9011338937111967 0.9616864629156309 0.8743579083405865 0.8441736448219904 1.0 12.27054513210598 -5.513711761214859 1.9620489515952917 0.9308512678311016 1.0090126607116305 0.21092310117386948 0.048386502979540724 0.67731320055707 3.9260797797761637 0.007254516982572558 0.07897090849630116 3.06399631599155e-06 5.513711761214859 0.07816139288052892 RGS(ph)LEMSSDGEPLSR ddPTM_A549_PD325901_60min_R1 4 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(0.972)LEMS(0.013)S(0.015)DGEPLSR;RGS(0.792)LEMS(0.085)S(0.123)DGEPLSR;RGS(1)LEMSSDGEPLSR;RGS(1)LEMSSDGEPLSR 119.18 2.9284000000000004e-15 6217900.0 1077.1599999999999 1266.9499999999998 975.5899999999999 1267.8200000000002 1404.19 1678.73 1447.03 1192.8 1431.05 1231.02 1621.71 True False 1186.5124902367183 1373.7203228614121 1041.7994040992494 1346.1303619718694 1305.5645385925193 1665.0589794611578 1502.0975184951983 1169.0086682665017 1370.907945110428 1153.2931871128123 1422.2499508666922 0.8342503295666701 0.9658782705700169 0.7325009246542048 0.9464794575324563 0.917957169059442 1.1707217697188195 1.0561417264102195 0.8219431946924167 0.9639008560169208 0.8108934624395785 1.0 10.473959315855154 -6.625556788565474 2.827288569539451 0.9871352316035308 0.8557180201038375 0.15484423116517132 0.10935364205455363 0.2693579035058767 4.332264660240006 0.01354422788181389 0.030969199121538962 2.3683354268012015e-07 6.625556788565474 -0.13141721149969332 RGS(ph)LHFIEQM ddPTM_A549_MK2206_60min_R1 5 RGSLHFIEQM 10 1 Q8IZP9-10;Q8IZP9-9;Q8IZP9-8;Q8IZP9-7;Q8IZP9-5;Q8IZP9-6;Q8IZP9-3;Q8IZP9-4;Q8IZP9-2;Q8IZP9 Q8IZP9-10 GPR64 G-protein coupled receptor 64 1 RGS(1)LHFIEQM;RGS(1)LHFIEQM;RGS(1)LHFIEQM;RGS(1)LHFIEQM;RGS(1)LHFIEQM 68.03399999999999 0.001795 16239800.0 2008.12 1883.0 1961.0500000000002 1505.31 2530.5 1869.5900000000001 1496.28 1928.1799999999998 2523.83 2477.96 2808.45 True False 2347.041562179692 1978.8366570567182 2239.1563780878514 1874.1110175759327 2158.266802133081 2067.4287728665972 1768.134707837967 2201.505419803595 1952.1865347283385 1918.187114982038 2111.0343557231654 1.1117969519618163 0.9373777606659741 1.0606915856283143 0.887769075143227 1.0223740775614878 0.9793439729020277 0.8375679453270986 1.042856272724864 0.9247535595220518 0.9086479856576921 1.0 11.043734342469902 -3.11010707128266 1.5914043885856788 0.9643602146756336 149.39716198037007 0.2887177453523977 0.06649305176741298 1325.6095150243577 4.027436061698254 0.008458097534979234 717811.4479878308 0.0007760557636797651 3.11010707128266 148.43280176569445 RGS(ph)LHFIEQM ddPTM_A549_PD325901_60min_R1 6 RGSLHFIEQM 10 1 Q8IZP9-10;Q8IZP9-9;Q8IZP9-8;Q8IZP9-7;Q8IZP9-5;Q8IZP9-6;Q8IZP9-3;Q8IZP9-4;Q8IZP9-2;Q8IZP9 Q8IZP9-10 GPR64 G-protein coupled receptor 64 1 RGS(1)LHFIEQM;RGS(1)LHFIEQM;RGS(1)LHFIEQM;RGS(1)LHFIEQM;RGS(1)LHFIEQM;RGS(1)LHFIEQM 70.622 0.0012652999999999998 32545600.0 3230.9 3580.17 4323.93 3800.7400000000007 4366.91 3953.0400000000004 3501.79 4309.46 4285.89 4320.19 4183.69 True False 3558.8985895371306 3881.88349050771 4617.377891703349 4035.5030776931776 4060.193306621654 3920.8477528662343 3635.0525347030157 4223.504439594032 4105.768947883952 4047.412466111763 3669.1226525960064 0.9699590137765253 1.0579868426478383 1.2584419570810546 1.0998550497727153 1.1065842412624047 1.068606346558659 0.9907143693141778 1.151093828004301 1.1190056415745617 1.1031008906851631 1.0 11.841219416922133 -7.3035574857343875 5.2951152918335245 1.0605830821797981 1.105339313648276 0.013763196481252682 0.07748237289438335 0.5007073532700578 35.65486570422269 0.012468360111389035 0.020342975042616816 4.9709857052278176e-08 7.3035574857343875 0.04475623146847796 RGS(ph)LPAGASWQNTDLFEMIEK ddPTM_A549_PD325901_60min_R1 1 RGSLPAGASWQNTDLFEMIEK 21 1 J3KPC5;P47736-3 J3KPC5 RAP1GAP Rap1 GTPase-activating protein 1 1 RGS(0.992)LPAGAS(0.007)WQNTDLFEMIEK 65.428 0.00036233 3566500.0 742.84 715.44 1061.2 1025.6 611.44 736.05 901.03 940.06 1134.2 1038.5 1533.3 True False 818.2525699500945 775.732639636898 1133.219413514001 1088.9489826934016 568.4945637534877 730.0558528365999 935.3191897125346 921.309765837196 1086.533518286745 972.9289327684808 1344.713820389526 0.6084956944318974 0.5768756354509615 0.8427216232415451 0.8097997999142773 0.422762490526654 0.5429079717683895 0.695552596790891 0.6851344515596026 0.808003533400145 0.7235211819914593 1.0 10.393083458310278 -9.32960258793144 0.7472235603581349 0.9700126070961979 0.6391876193662323 0.23264682189443653 0.13465790260896376 0.3090434998571578 0.3748825725773583 0.03987383256572767 0.028527855234143713 4.681633499623187e-10 9.32960258793144 -0.3308249877299656 RGS(ph)LPDTGWK ddPTM_A549_MK2206_60min_R1 2 RGSLPDTGWK 10 1 O75096 O75096 LRP4 Low-density lipoprotein receptor-related protein 4 1 RGS(1)LPDTGWK;RGS(1)LPDTGWK 111.31 6.8519e-05 9741000.0 2841.3 2090.2799999999997 2021.88 1549.75 3486.9 2530.3 2995.9 2382.24 3532.8 3647.0 3687.3 True False 3320.8419768844265 2196.666323692254 2308.6129867817067 1929.4388195709216 2973.9816290684976 2798.0546665227967 3540.2162504422713 2719.929815304024 2732.626440722345 2823.1401670484984 2771.6416456971 1.1981498337059358 0.7925506268469158 0.8329406474194696 0.6961357441595395 1.0730036596489756 1.0095297387621167 1.2772994142075917 0.9813425265588149 0.9859234309618181 1.0185805121781701 1.0 11.436525023595996 -6.800573278297078 24.99924425915593 1.0199676963442847 0.8703436915600653 0.2346091727451537 0.14059908209520952 184.06573702198546 117583.07343839253 0.019599708358921508 0.03704037559916172 1.5828024786804932e-07 6.800573278297078 -0.14962400478421944 RGS(ph)LPDTGWK ddPTM_A549_PD325901_60min_R1 2 RGSLPDTGWK 10 1 O75096 O75096 LRP4 Low-density lipoprotein receptor-related protein 4 1 RGS(1)LPDTGWK;RGS(1)LPDTGWK 96.059 0.00022765 9965700.0 4146.0 3220.8 2595.6 2914.7 3236.0 3312.3 2692.1 2420.8 3977.5 3653.6 4942.1 True False 4566.898867876116 3492.228119398583 2771.753024610761 3094.7343992360165 3008.714523593952 3285.3257269895635 2794.5493386736453 2372.5152449191373 3810.3395071288405 3422.9110724727243 4334.25303055311 1.0536761088203743 0.8057277908744813 0.6394995873734319 0.7140179351368156 0.6941714067879416 0.757991216440428 0.6447591589540914 0.5473873417621795 0.879122533979653 0.7897349435632544 1.0 12.081567664043927 -8.966746838982212 6.087724719766097 0.9479275653625855 0.7262880647564087 0.20139417019899397 0.13143828719282838 0.135970845038692 12.770119533064687 0.022451739940378652 0.02333229797645913 1.0795758503660275e-09 8.966746838982212 -0.22163950060617676 RGS(ph)LPPR ddPTM_A549_PD325901_60min_R1 1 RGSLPPR 7 1 Q86UR1;Q86UR1-2 Q86UR1 NOXA1 NADPH oxidase activator 1 1 RGS(1)LPPR 47.198 0.025121 7255900.0 424.26 710.94 488.38 398.32 688.36 410.61 305.23 381.42 364.98 437.07 823.93 True False 467.33056287629523 770.8534088441473 521.5244036675156 422.92332174964497 640.0119683130822 407.2661282973117 316.845694678265 373.8122788817983 349.6411598521394 409.473325609167 722.5918333225998 0.6467421043598431 1.0667895391228444 0.7217413477667717 0.5852866061396955 0.8857171349006239 0.563618504273198 0.4384850202656661 0.5173214830881026 0.4838708987955622 0.5666730604002804 1.0 9.497037139408677 -4.969272442410175 16.661564577645088 0.7192764478730647 0.41100323696271635 0.0 0.20622042767441315 20929120.08466719 305340175.22743213 0.03328316474025169 184199345.53266957 1.0733158866159338e-05 4.969272442410175 -0.3082732109103483 RGS(ph)LSNAGDPEIVK ddPTM_A549_MK2206_60min_R1 3 RGSLSNAGDPEIVK 14 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 RGS(0.981)LS(0.019)NAGDPEIVK;RGS(0.5)LS(0.5)NAGDPEIVK;RGS(0.993)LS(0.007)NAGDPEIVK 123.83 4.7096000000000003e-07 411092900.0 11268.3 10533.79 12098.98 9500.74 15975.3 12391.3 11617.61 13739.93 18381.7 14862.4 16601.699999999997 True False 13170.113556515265 11069.914917545135 13814.797294998772 11828.42172650442 13625.354532351945 13702.539141320767 13728.379356220383 15687.607154270876 14218.274299543116 11504.973517614908 12479.039706389378 1.0553787684297575 0.8870806711094317 1.107040094433346 0.9478631372931817 1.0918592177710311 1.098044357876748 1.1001150472492953 1.2571165348755708 1.1393724704845065 0.9219438184593852 1.0 13.607219298995291 -6.782493381581745 24.598655231633177 1.0885651271114294 0.9990149179812347 0.1676742802973481 0.09381976047675084 255.6446462313833 298684.5869550718 0.012927219114055682 0.024449100457155964 1.650086147568963e-07 6.782493381581745 -0.08955020913019474 RGS(ph)LSNAGDPEIVK ddPTM_A549_PD325901_60min_R1 4 RGSLSNAGDPEIVK 14 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 RGS(0.977)LS(0.023)NAGDPEIVK;RGS(0.5)LS(0.5)NAGDPEIVK;RGS(0.916)LS(0.084)NAGDPEIVK;RGS(0.573)LS(0.427)NAGDPEIVK 120.11 9.986e-07 531125700.0 9778.8 10397.2 9957.7 9629.1 11557.0 9977.6 10349.73 10288.2 11160.300000000001 10681.900000000001 12852.999999999998 True False 10771.53657722792 11273.408532976578 10633.48940251448 10223.867637727217 10745.276189485568 9896.345733662733 10743.594638739569 10082.993780063236 10691.271401988679 10007.443011015544 11272.162481879981 0.9555874123126935 1.0001105423292647 0.943340678384279 0.9070014430826472 0.9532577450652097 0.8779456248586839 0.9531085677668251 0.8945039424575066 0.9484667577472303 0.887801522299073 1.0 13.46047669209681 -10.106815069422952 0.9017990164565679 0.9955507191200117 0.9366951225642252 0.0 0.04543613408142369 0.4466451292187911 0.7253351740249718 0.013919683849672132 0.006338922143100768 7.81960706954564e-11 10.106815069422952 -0.05885559655578654 RGS(ph)LSQEMAK ddPTM_A549_MK2206_60min_R1 3 RGSLSQEMAK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RGS(1)LSQEMAK;RGS(1)LSQEMAK;RGS(0.988)LS(0.012)QEMAK 120.9 2.5062000000000003e-09 14910600.0 5382.4 5224.700000000001 4865.1 4233.8 5838.8 4198.4 4379.9 4722.2 5900.799999999999 6667.1 7175.799999999999 True False 6290.817532954193 5490.61491350198 5555.044335960432 5271.081190062503 4979.920254611588 4642.671901327633 5175.671135656097 5391.58631113098 4564.278221641307 5160.99747949795 5393.8508179950795 1.1662943127693917 1.0179397055595372 1.0298846822807142 0.9772389648740396 0.9232588038952564 0.8607342060404513 0.9595502935284961 0.9995801687995255 0.8462003076566125 0.956829851926887 1.0 12.397099905027785 -4.752967411473303 0.7102286411005075 0.929011662787706 1.4943177085930681 0.6386496032100438 0.04982171455020207 2.9470320299519823 0.6306837959184995 0.010185205598014408 1.5800843466566898 1.7661703453495662e-05 4.752967411473303 0.5653060458053621 RGS(ph)LSQEMAKGEEK ddPTM_A549_MK2206_60min_R1 2 RGSLSQEMAKGEEK 14 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RGS(0.996)LS(0.004)QEMAKGEEK;RGS(1)LSQEMAKGEEK 98.796 7.6742e-06 15384800.0 3134.7 3044.8 2887.5 2769.9 3886.4 2320.1 2137.5 2855.1000000000004 4088.5 3706.8999999999996 4252.4 True False 3663.7607239431304 3199.767314607698 3296.9909190120948 3448.525624345534 3314.715708282949 2565.611442042263 2525.8560817518464 3259.81916837704 3162.4612779928966 2869.508715446141 3196.411719730521 1.146210515162299 1.0010498005799642 1.0314662841024915 1.0788740396172332 1.0370114988072945 0.8026536213108872 0.7902161245876026 1.0198370717561582 0.989378576755911 0.8977281298693461 1.0 11.642237533903284 -2.0000032103698486 0.6553139636724598 0.9747523930173012 15.911632699626496 0.26898844554581647 0.08931535697834471 253.64179100698 1.480253836373298 0.015141619913141103 5514.762053518361 0.009999926078775654 2.0000032103698486 14.936880306609195 RGS(ph)LTLTISGESPK ddPTM_A549_MK2206_60min_R1 3 RGSLTLTISGESPK 14 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.985)LT(0.014)LTISGESPK;RGS(0.968)LT(0.032)LTISGESPK;RGS(0.996)LT(0.004)LTISGESPK 131.31 3.7068e-09 44542000.0 5117.299999999999 5652.799999999999 5481.2 5122.9 8317.0 6417.7 5771.3 6780.099999999999 10338.7 9267.3 10101.699999999999 True False 5980.975134026917 5940.503374939041 6258.516580186699 6378.01072997572 7093.580317463283 7096.816754275521 6819.870505082774 7741.199938185411 7997.000957511355 7173.81049358062 7593.1690972631495 0.7876783800564476 0.7823483579577085 0.8242298439583668 0.8399669029199658 0.9342054979415727 0.9346317279873917 0.8981586499293028 1.0194952646287856 1.0531835726394874 0.9447715969036325 1.0 12.89048642151175 -7.045755576067934 0.6136378300176221 1.026305396740905 0.7693125418888368 0.800708180840809 0.039620403241486024 0.224067247933661 0.15105445645104731 0.0074410691296768975 0.02729083361020686 9.000039674629474e-08 7.045755576067934 -0.25699285485206824 RGS(ph)LTLTISGESPK ddPTM_A549_PD325901_60min_R1 4 RGSLTLTISGESPK 14 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.936)LT(0.064)LTISGESPK;RGS(0.893)LT(0.098)LT(0.008)ISGESPK;RGS(0.998)LT(0.002)LTISGESPK;RGS(0.978)LT(0.022)LTISGESPK 156.08 2.482e-19 81703000.0 12503.5 13073.699999999999 12601.599999999999 12767.5 14485.4 14699.800000000001 13653.400000000001 14139.2 15278.8 13939.3 13371.500000000002 True False 13772.8461154098 14175.466581154145 13456.820355576729 13556.119477903683 13467.99547591713 14580.089702503163 14172.987608427165 13857.182564012184 14636.685169458224 13059.170219104177 11726.890268922296 1.1744670410969513 1.208800138492033 1.1475182292136699 1.1559858723867376 1.1484711775302425 1.2433040105391109 1.2085887463266651 1.1816587557517635 1.2481301379827219 1.11360897216823 1.0 13.517532870460494 -10.85906221668314 1.051606609629299 0.9975481437803279 1.1934667621283301 0.5139500925289302 0.045924914879110615 0.18629765641055387 0.3581924496675104 0.02747925984515121 0.006348979031459259 1.383368184546238e-11 10.85906221668314 0.19591861834800228 RGS(ph)MFYDEDGDLAHEFYEETIVTK ddPTM_A549_MK2206_60min_R1 4 RGSMFYDEDGDLAHEFYEETIVTK 24 1 O75896 O75896 TUSC2 Tumor suppressor candidate 2 1 RGS(0.519)MFY(0.475)DEDGDLAHEFY(0.006)EETIVTK;RGS(0.533)MFY(0.467)DEDGDLAHEFYEETIVTK;RGS(0.523)MFY(0.477)DEDGDLAHEFYEETIVTK;RGS(0.967)MFY(0.033)DEDGDLAHEFYEETIVTK 121.42 2.0652e-16 11630800.0 2244.9900000000002 2073.44 2531.66 2558.41 3713.27 2900.79 2344.86 2794.4300000000003 3738.2 2861.4399999999996 3307.16 True False 2623.8894272642 2178.969239621709 2890.6874562861162 3185.2205648513896 3167.052901939026 3207.7496724114376 2770.890709640531 3190.5490100829584 2891.5036686787435 2215.038716643612 2485.90089902737 1.055508459042281 0.8765310155663283 1.1628329421406631 1.2813143782592598 1.2740060970162417 1.2903771319550579 1.1146424665298065 1.2834578447319793 1.16316127879839 0.8910406354132077 1.0 11.279553068851545 -3.7891092918107283 14.92712985499549 1.1211187632042188 1.1416842426025744 0.0 0.14750122063028415 0.0 0.0 0.019090864421784044 0.0 0.00016251397318693908 3.7891092918107283 0.020565479398355624 RGS(ph)MFYDEDGDLAHEFYEETIVTK ddPTM_A549_PD325901_60min_R1 6 RGSMFYDEDGDLAHEFYEETIVTK 24 1 O75896 O75896 TUSC2 Tumor suppressor candidate 2 1 RGS(0.905)MFY(0.095)DEDGDLAHEFYEETIVTK;RGS(0.524)MFY(0.476)DEDGDLAHEFYEETIVTK;RGS(0.998)MFY(0.002)DEDGDLAHEFYEETIVTK;RGS(0.952)MFY(0.048)DEDGDLAHEFYEETIVTK;RGS(0.905)MFY(0.095)DEDGDLAHEFYEETIVTK;RGS(0.995)MFY(0.005)DEDGDLAHEFYEETIVTK 153.25 3.404e-29 23525900.0 4552.21 4832.89 5687.13 6066.17 6340.040000000001 6191.32 6182.07 5968.4400000000005 6250.869999999999 5669.72 5588.870000000001 True False 5014.34700804012 5240.174601328928 6073.092841290875 6440.863543628352 5894.73746235062 6140.899942645602 6417.332056808507 5849.394782049401 5988.167671885968 5311.7329115995335 4901.47442076594 1.0230282926288417 1.0691016929779387 1.2390338742891676 1.314066542169541 1.2026457666241306 1.2528678955517187 1.3092656425218452 1.193394941992849 1.2217074206316503 1.0837010367932276 1.0 12.259000078698282 -10.631542106505941 0.8415964519656509 0.9960793304299461 1.20787380416484 0.31907184726322746 0.08763396235994021 0.500874020680196 0.6144490746927018 0.06697211947525285 0.016811189884962836 2.335919614926414e-11 10.631542106505941 0.2117944737348939 RGS(ph)MNNELLSPEFGPVRDPLADGVEGLGR ddPTM_A549_MK2206_60min_R1 4 RGSMNNELLSPEFGPVRDPLADGVEGLGR 29 2 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 RGS(1)MNNELLSPEFGPVRDPLADGVEGLGR;RGS(1)MNNELLSPEFGPVRDPLADGVEGLGR;RGS(1)MNNELLSPEFGPVRDPLADGVEGLGR;RGS(0.999)MNNELLS(0.001)PEFGPVRDPLADGVEGLGR 89.634 1.144e-09 23150300.0 1609.68 2059.7500000000005 2134.14 1393.5 2560.33 2084.23 2177.2900000000004 2173.3399999999997 3601.18 2824.62 2765.26 True False 1881.3546311024265 2164.5824770964277 2436.7931428226766 1734.9075625565924 2183.7088486486414 2304.7818352000972 2572.8754097017454 2481.417600574607 2785.518479902768 2186.5363802162133 2078.569624706525 0.9051198520078714 1.0413807896389553 1.1723413610293327 0.8346641565117385 1.05058248840568 1.108830711179815 1.2378105496778884 1.1938101909504046 1.3401131464605416 1.051942814051722 1.0 11.02137535859815 -7.323802562240185 2.93832644467744 1.1726485048241366 1.0010066299391862 0.3145876648349787 0.1157170416172216 0.3075247719243778 5.238613254954443 0.021871677954423685 0.03722211220881983 4.7445763285872674e-08 7.323802562240185 -0.17164187488495042 RGS(ph)MNNELLSPEFGPVRDPLADGVEGLGR ddPTM_A549_PD325901_60min_R1 3 RGSMNNELLSPEFGPVRDPLADGVEGLGR 29 2 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 RGS(1)MNNELLSPEFGPVRDPLADGVEGLGR;RGS(1)MNNELLSPEFGPVRDPLADGVEGLGR;RGS(1)MNNELLSPEFGPVRDPLADGVEGLGR 160.63 2.9917000000000004e-46 26405000.0 1640.1499999999999 1590.54 1314.82 1504.5600000000002 1882.21 2124.51 1386.47 1491.73 1862.29 1627.6499999999999 2033.75 True False 1806.6568205853866 1724.5803878006166 1404.051591854954 1597.49325409632 1750.0100628719952 2107.2086949390464 1439.2328745554953 1461.9762749104536 1784.0244275879227 1524.8799012235138 1783.6116430034554 1.0129205130905767 0.9669035266536862 0.787195798683309 0.8956508331635875 0.9811609325027292 1.1814279768832863 0.806920542485328 0.819671861105709 1.0002314318736854 0.8549394186818278 1.0 10.800585807036164 RGS(ph)MSYLAAVEEEVEESSVK ddPTM_A549_MK2206_60min_R1 1 RGSMSYLAAVEEEVEESSVK 20 1 Q8WXH0;Q8WXH0-2;A0A0C4DGK3;Q8WXH0-7;G3V5X4;A0A0A0MRE3 Q8WXH0 SYNE2 Nesprin-2 1 RGS(0.958)MS(0.042)YLAAVEEEVEESSVK 194.27 2.6962999999999997e-46 10146000.0 6024.1 6723.3 6444.2 5430.0 9288.3 7772.0 7434.5 7838.0 10097.0 9419.8 9614.2 True False 7040.820804895466 7065.4872524638495 7358.084460709178 6760.350243761961 7922.003374136604 8594.427881363938 8785.252416273262 8949.060502868286 7810.045621595761 7291.860637664773 7226.728801578683 0.9742749448903347 0.9776881693582289 1.018176364816928 0.935464776578465 1.0962087538702212 1.1892556255171054 1.2156610075576821 1.238327983321217 1.0807165781410881 1.0090126304548557 1.0 12.819127039765105 -6.772194472841805 24.762319974525713 1.0829712207295388 0.9794769488223226 0.3811130184400776 0.07922240225263266 232.11785296777722 534424.6973791834 0.01410499534306447 0.02685260628148351 1.689684138102964e-07 6.772194472841805 -0.10349427190721616 RGS(ph)MSYLAAVEEEVEESSVK ddPTM_A549_PD325901_60min_R1 4 RGSMSYLAAVEEEVEESSVK 20 1 Q8WXH0;Q8WXH0-2;A0A0C4DGK3;Q8WXH0-7;G3V5X4;A0A0A0MRE3 Q8WXH0 SYNE2 Nesprin-2 1 RGS(0.961)MS(0.039)YLAAVEEEVEESSVK;RGS(0.888)MS(0.112)YLAAVEEEVEESSVK;RGS(0.974)MS(0.026)YLAAVEEEVEESSVK;RGS(0.97)MS(0.03)YLAAVEEEVEESSVK 219.95 1.0827999999999997e-67 125720000.0 25119.9 27934.9 27085.9 26914.699999999997 30981.3 28352.0 29686.7 34608.2 31719.9 36609.2 34684.3 True False 27670.053755707017 30289.07206054007 28924.11205474826 28577.1598912813 28805.28036768272 28121.110712075635 30816.443613685547 33917.9123013923 30386.8229119236 34297.68886423485 30418.350981892952 0.9096500258077137 0.9957499694368759 0.9508770568123774 0.93947104194742 0.9469704779469985 0.9244784744845377 1.0130872522323635 1.115047700040759 0.998963518108259 1.127532813486541 1.0 14.892654324369605 -7.773060339494225 24.71585955634271 1.0109271860288103 0.9470299864320378 0.4400466283053951 0.05139558259813428 150.76605647933553 320653.8666813439 0.006080634635486419 0.008440412110360831 1.6863187173521492e-08 7.773060339494225 -0.06389719959677242 RGS(ph)PAPANPGR ddPTM_A549_MK2206_60min_R1 4 RGSPAPANPGR 11 1 E9PJN1;O75676-2;O75676 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 RGS(1)PAPANPGR;RGS(1)PAPANPGR;RGS(1)PAPANPGR;RGS(1)PAPANPGR 114.56 9.4361e-06 88364100.0 1589.35 1608.78 1581.15 1591.94 1843.07 1295.72 1211.4299999999998 1369.3600000000001 2178.06 2326.25 2145.06 True False 1857.5934241232053 1690.6600303450375 1805.3808455743651 1981.9653714649025 1571.9568445000655 1432.8322303706739 1431.5311499960883 1563.4709734891208 1684.73288764711 1800.7485093492098 1612.38240135574 1.152079942426365 1.0485478066018825 1.1196976871344826 1.2292154576968874 0.97492805873986 0.8886429355504656 0.8878360051513918 0.9696651192511819 1.0448717911027405 1.1168247109588183 1.0 10.654978226489295 -6.784996613976519 24.99881909606585 0.9945586899102772 1.1297763260374238 0.5048376987725046 0.07274375911034987 159.93505471136848 169721.9183685777 0.01044480484539749 0.019747062587756072 1.6406025642834274e-07 6.784996613976519 0.13521763612714666 RGS(ph)PAPANPGR ddPTM_A549_PD325901_60min_R1 5 RGSPAPANPGR 11 1 E9PJN1;O75676-2;O75676 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 RGS(1)PAPANPGR;RGS(1)PAPANPGR;RGS(1)PAPANPGR;RGS(1)PAPANPGR;RGS(1)PAPANPGR 111.83 2.4248000000000002e-05 117732700.0 3284.37 2865.1099999999997 2754.42 3106.39 3615.48 2674.2200000000003 2701.62 2762.91 3271.06 3477.33 3269.96 True False 3617.796824574595 3106.56287480442 2941.3515048730033 3298.26465517644 3361.541157528882 2652.4420389548163 2804.431627483189 2707.801592589034 3133.588723617564 3257.7707903551495 2867.7756499843063 1.2615341177732622 1.0832656574168975 1.0256560707212572 1.1501125114841149 1.1721771741618903 0.9249126719411721 0.9779117928902619 0.9442166762953902 1.0926896333870164 1.1359922071913044 1.0 11.485716449108022 -7.240793687565789 24.83335472141648 1.0235763557006865 1.129848380243621 0.3803933442032448 0.07900347580339188 728.2946357146669 876018.5029877787 0.011375383281145514 0.019686540592037085 5.743892621358457e-08 7.240793687565789 0.1062720245429345 RGS(ph)PLLIGVR ddPTM_A549_MK2206_60min_R1 2 RGSPLLIGVR 10 1 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210;E5RJP4;O94808 A0A6I8PRN4;E5RJP4 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 1 RGS(1)PLLIGVR;RGS(1)PLLIGVR 71.085 0.0011705 4544000.0 245.32 193.72 246.398 109.82 297.78999999999996 337.59000000000003 353.4 297.51 331.19 349.73 474.40000000000003 True False 286.72401850184355 203.57952055497992 281.3409414589587 136.72590493000718 253.98548548002756 373.3135497258946 417.6082055163052 339.6829535861629 256.1759938017532 270.72575010196624 356.5933872260747 0.8040643174352108 0.5709009977403582 0.7889684765258782 0.383422435266095 0.7122551751611835 1.046888593840411 1.1711047385507125 0.9525778260459137 0.7183980493708414 0.7592001416737723 1.0 8.478136139219387 -7.050514115964835 8.117276152117464 0.9067683630611716 0.6312876664350034 0.4486182885711659 0.15879933408980132 0.2708706253893291 40.554807600366 0.025552324017530485 0.04456971400464237 8.901965032959103e-08 7.050514115964835 -0.27548069662616814 RGS(ph)PLLIGVR ddPTM_A549_PD325901_60min_R1 2 RGSPLLIGVR 10 1 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210;E5RJP4;O94808 A0A6I8PRN4;E5RJP4 GFPT1;GFPT2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1;Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 1 RGS(1)PLLIGVR;RGS(1)PLLIGVR 107.09 0.00011522 10287800.0 206.45 705.11 460.87 541.43 600.91 521.8299999999999 472.70000000000005 471.51 640.95 656.81 471.34 True False 227.40865201954273 764.5320942837606 492.1474096364465 574.8729014232534 558.7041546269597 517.5803894921848 490.68885717136544 462.10536315756065 614.0131004636652 615.3389045081044 413.3681680704358 0.5501358585037285 1.8495185486887522 1.1905788777441304 1.3907043304923714 1.3515896911824121 1.2521050953395905 1.1870504191502105 1.1179026322095036 1.485390380516771 1.4885977006416562 1.0 8.691283486290656 -7.51094362526637 17.95912728517073 1.2219335015827455 1.3016041223875041 0.0 0.3147136985449459 71.01620120469862 106854.82902626132 0.045599546341422235 0.07052358530892973 3.083588197520137e-08 7.51094362526637 0.07967062080475862 RGS(ph)PSAAFTFPDTDDFGK ddPTM_A549_MK2206_60min_R1 2 RGSPSAAFTFPDTDDFGK 18 1 Q9ULT0;Q9ULT0-4;H7C055;Q9ULT0-3 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 RGS(0.992)PS(0.008)AAFTFPDTDDFGK;RGS(0.987)PS(0.013)AAFTFPDTDDFGK 184.3 4.531299999999999e-40 39713000.0 5431.4 6601.299999999999 5858.1 4744.9 8461.8 6860.4 5732.1 5589.2 8487.9 8192.0 8471.6 True False 6348.087535019214 6937.277973567982 6688.8666675895265 5907.400713006653 7217.08042927868 7586.362974435039 6773.548372495796 6381.486216207127 6565.404202391075 6341.421510408907 6367.867915734428 0.9968937200053508 1.08941926330265 1.0504091410347787 0.9276889519661672 1.133359002539284 1.1913505548206833 1.0637074232898218 1.0021385965684133 1.0310207889470435 0.9958468979452018 1.0 12.636594696031839 -8.243072276620858 14.300098201936068 1.0141199625188233 1.06733671790299 0.15079970050874192 0.0646331672990612 5.680695112531375 4420.3469153832975 0.010640717190432752 0.013662902412044032 5.713835373564302e-09 8.243072276620858 0.0532167553841667 RGS(ph)PSAAFTFPDTDDFGK ddPTM_A549_PD325901_60min_R1 2 RGSPSAAFTFPDTDDFGK 18 1 Q9ULT0;Q9ULT0-4;H7C055;Q9ULT0-3 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 RGS(0.966)PS(0.034)AAFTFPDTDDFGK;RGS(0.68)PS(0.316)AAFT(0.003)FPDTDDFGK 130.45 6.8558e-13 55616000.0 7708.5 7538.200000000001 7215.2 7572.299999999999 9067.7 9395.0 9111.900000000001 8131.0 9124.900000000001 8446.4 9059.2 True False 8491.061245302231 8173.470569315203 7704.866860522254 8040.0237730589415 8430.816033866771 9318.490234902325 9458.658340723001 7968.820826353894 8741.412185694524 7913.092862528358 7944.975831000331 1.0687334267489073 1.0287596517818611 0.9697785146757526 1.0119632764253033 1.061150620618725 1.1728783615102651 1.1905207192470573 1.0030012671983874 1.1002440248573941 0.9959870276322843 1.0 12.95582711549466 -4.862190793895608 16.72472186292439 1.0549293173696417 3.855576377479365 0.0035560121799854683 0.0696475998274113 1305.3405539875666 159764.07064124628 0.009869075588405458 1189.8319464099225 1.3734384645955152e-05 4.862190793895608 2.8006470601097235 RGS(ph)PTTGFIEQK ddPTM_A549_MK2206_60min_R1 4 RGSPTTGFIEQK 12 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.983)PT(0.016)T(0.001)GFIEQK;RGS(1)PTTGFIEQK;RGS(0.974)PT(0.021)T(0.004)GFIEQK;RGS(0.965)PT(0.028)T(0.006)GFIEQK 152.17 7.1457e-13 414491300.0 13060.4 14749.7 12657.0 12014.6 19304.2 15722.7 15318.3 15364.199999999999 23384.3 18621.1 21493.8 True False 15264.676223876875 15500.396728937574 14451.952921882632 14958.177539355887 16464.57775211912 17386.465678116423 18101.43682671313 17542.122400889133 18087.793387053753 14414.580577084385 16156.296261298055 0.9448128442929689 0.9594028531197667 0.8945090315347751 0.9258419935754566 1.019081198180275 1.0761417961717628 1.1203952028333748 1.08577622724775 1.1195507370326294 0.8921958562751848 1.0 13.979808885938708 -6.908929891595317 3.269604152113345 1.0664519164557984 0.930235195819103 0.42102174017528504 0.06288025177286061 0.12525874104688908 2.679381739629366 0.007325233551748277 0.014523930827016224 1.2333039101100587e-07 6.908929891595317 -0.13621672063669543 RGS(ph)PTTGFIEQK ddPTM_A549_PD325901_60min_R1 4 RGSPTTGFIEQK 12 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.949)PT(0.05)T(0.001)GFIEQK;RGS(0.992)PT(0.006)T(0.002)GFIEQK;RGS(0.995)PT(0.005)TGFIEQK;RGS(0.99)PT(0.009)T(0.001)GFIEQK 153.03 4.0078000000000004e-13 809166000.0 38426.2 39458.2 46197.8 39938.7 46598.0 43535.1 45327.399999999994 48258.2 45907.899999999994 47420.8 49390.7 True False 42327.199536126645 42783.48099256494 49333.06051793923 42405.62279163121 43325.117234373 43180.5645796164 47052.35901110498 47295.65234317446 43978.55061202263 44426.64259511563 43315.95701344357 0.9771733664568452 0.9877071624964128 1.1389119372943368 0.9789838598849421 1.0002114745133435 0.9968743058410288 1.0862592507537527 1.0918759645203209 1.015296755382166 1.0256414877622893 1.0 15.40261097178343 -8.985933861440316 23.23050650698064 1.0067484831540858 1.0334410080631333 0.023189155628771774 0.050807617701051154 88.37555059338231 145959.79406704224 0.009006117814341479 0.00907388056984314 1.0329186966229776e-09 8.985933861440316 0.0266925249090475 RGS(ph)PTTGFIEQKGS(ph)PTSAYPER ddPTM_A549_PD325901_60min_R1 3 RGSPTTGFIEQKGSPTSAYPER 22 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 2 RGS(0.975)PT(0.108)T(0.036)GFIEQKGS(0.482)PT(0.349)S(0.049)AYPER;RGS(0.999)PT(0.001)TGFIEQKGS(0.983)PT(0.009)S(0.008)AYPER;RGS(0.994)PT(0.163)T(0.152)GFIEQKGS(0.369)PT(0.283)S(0.039)AY(0.001)PER 133.13 2.2777e-22 46612000.0 8776.7 8919.5 9435.9 9850.599999999999 10107.2 11637.199999999999 9952.5 11466.6 10029.0 11391.7 12204.6 True False 9667.704122934952 9671.177567987968 10076.27691667617 10459.049189664225 9397.30513994709 11542.430501501363 10331.247833716974 11237.889667626325 9607.516006786955 10672.426117880317 10703.511571333736 0.9032273248367484 0.9035518393691864 0.9413991706854942 0.9771605439915407 0.8779646826481747 1.0783779159368996 0.9652204105974189 1.0499254933982383 0.897604112702406 0.9970957705565833 1.0 13.385796568271134 -5.893958110903513 2.6823836841517 0.9639060735953083 0.9014507948745556 0.18222321151831256 0.05633309002765718 0.4264582046018353 6.057055806220472 0.008297432688156253 0.033469220504972357 1.2765619313684003e-06 5.893958110903513 -0.06245527872075274 RGS(ph)PVPPVPER ddPTM_A549_MK2206_60min_R1 4 RGSPVPPVPER 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER 114.72 1.7905999999999998e-05 353679000.0 10755.2 12093.699999999999 11348.4 11040.1 16583.2 12185.199999999999 11333.6 12013.0 17990.100000000002 16922.2 19340.0 True False 12570.414820605858 12709.217673630817 12957.773764611913 13744.924995608922 14143.833247632201 13474.629776118865 13392.768415505376 13715.879538269559 13915.371074286424 13099.463267021685 14537.344243154048 0.8646981601557341 0.874246180117518 0.8913439448002348 0.9454907833032644 0.9729310258503949 0.9268976197261314 0.92126651137207 0.9434927940657845 0.9572154887120786 0.9010905326253458 1.0 13.827476113924948 -2.0000000000000018 0.13353026411446936 1.0144715122268764 0.5135057946425636 0.2748881251565545 0.034066552438714925 25.474635904503305 0.21959177105519304 0.05716055304717983 2.4321347663812256 0.009999999999999959 2.0000000000000018 -0.5009657175843127 RGS(ph)PVPPVPER ddPTM_A549_PD325901_60min_R1 6 RGSPVPPVPER 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER 87.647 0.0001284 455100000.0 21778.0 23043.700000000004 23733.9 23889.0 27106.200000000004 25687.6 22360.9 26115.9 24749.9 26449.4 27768.2 True False 23988.88652788374 24985.673470872203 25344.625177534803 25364.569274144593 25202.354023313477 25478.408702296638 23211.856285853995 25594.99788697279 23709.747773095667 24779.38037011717 24352.88743712284 0.9850530697774988 1.0259840249080592 1.0407236202677217 1.041542582563724 1.034881555149626 1.0462171587693574 0.9531459604445307 1.0510046479316661 0.9735908250843885 1.0175130334789046 1.0 14.571805217329448 -8.776671719298362 24.99602995720819 0.9875290003479115 1.0226050952209755 0.10380206081125487 0.029690329669250136 245.29632938796323 402525.73893425905 0.004844045923350476 0.005166882914233588 1.6723542596280904e-09 8.776671719298362 0.03507609487306407 RGS(ph)PVPPVPERR ddPTM_A549_MK2206_60min_R1 3 RGSPVPPVPERR 12 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(1)PVPPVPERR;RGS(1)PVPPVPERR;RGS(1)PVPPVPERR 71.685 0.00048395 110079000.0 3315.41 3559.56 3550.61 2578.04 4474.83 3656.24 3801.12 3738.47 5815.41 5328.42 6095.490000000001 True False 3874.9701540078127 3740.7263998899675 4054.13988812244 3209.659915732615 3816.5884347714555 4043.140889984312 4491.734301505766 4268.409571084206 4498.228920301496 4124.7262212515925 4581.811606034289 0.8457288267602362 0.8164295526606541 0.884833388344274 0.7005220187371874 0.832986766576123 0.8824328099085211 0.9803402426215232 0.9315986640442986 0.9817577209803402 0.9002391577644286 1.0 12.161702424093022 -7.592823951772983 2.022000424480068 0.9864553247556401 0.8130176904880227 0.6114564208793252 0.05216030347836191 0.1130611416785338 0.9352361705844077 0.007022907645762169 0.011337897809683986 2.553736290797005e-08 7.592823951772983 -0.17343763426761738 RGS(ph)PVPPVPERR ddPTM_A549_PD325901_60min_R1 3 RGSPVPPVPERR 12 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(1)PVPPVPERR;RGS(1)PVPPVPERR;RGS(1)PVPPVPERR 56.851000000000006 0.0031801 143679000.0 6256.54 6061.530000000001 6559.53 5587.860000000001 6703.68 6606.55 5479.79 6105.09 7391.45 6102.360000000001 7149.339999999999 True False 6891.699334978685 6572.3564060413855 7004.699151458242 5933.009421249179 6232.836643240515 6552.748447194668 5688.326407106145 5983.319190599546 7080.813060959764 5717.055948164731 6270.016503400285 1.099151705779603 1.0482199532452807 1.117173957621887 0.9462510055646035 0.9940702133495809 1.045092695312852 0.907226704111754 0.9542748711035672 1.1293133051754771 0.9118087560159245 1.0 12.614253525032689 -3.7116071079561808 15.37213760434506 1.0393284152708304 1.0310778937351277 0.0 0.08037015817955226 0.0 0.0 0.010305610131925935 0.0 0.0001942642528174455 3.7116071079561808 -0.008250521535702715 RGS(ph)QVGHK ddPTM_A549_MK2206_60min_R1 1 RGSQVGHK 8 1 Q5JTH9-2;Q5JTH9-3;Q5JTH9 Q5JTH9-2 RRP12 RRP12-like protein 1 RGS(1)QVGHK 40.883 0.039506 5307900.0 1249.8 1192.3 761.92 675.4 2135.7 1727.5 1787.0 2216.6 2384.8 1817.5 1666.4 True False 1460.7356853236754 1252.9829772749463 869.971712905176 840.8730303198586 1821.5413591446827 1910.302903378306 2111.674768697333 2530.809838052799 1844.6466077430514 1406.9254876914285 1252.5868896996856 1.1661751351029186 1.000316215648206 0.6945400116025136 0.6713091420919011 1.454223554568264 1.5250861390033479 1.6858509266400021 2.020466491278361 1.4726695791820998 1.1232158816772755 1.0 10.29069496871403 -6.769783543872182 24.998742328656643 1.361468044771001 0.8779912551984527 0.4550491126446007 0.2937302697493435 179.20396719270826 536888.4627389188 0.05215670456750906 0.09973076748163073 1.699090282759781e-07 6.769783543872182 -0.48347678957254836 RGS(ph)RS(ph)SPEPK ddPTM_A549_MK2206_60min_R1 1 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGS(0.908)RS(0.599)S(0.493)PEPK 49.62 0.023829 230350000.0 6088.8 5199.7 4648.4 3642.1 2405.8 1781.5 1428.9 1751.9 2888.6 7291.6 7682.3 True False 7116.440583132336 5464.342520285615 5307.6130174669515 4534.4146635000825 2051.9100069439896 1970.0171475360073 1688.5126340188122 2000.2371899687353 2234.336712146332 5644.422495763864 5774.572889306227 1.2323752283586336 0.9462764822667459 0.919135167086725 0.7852381033924155 0.35533537220456 0.34115374163589274 0.2924047659257574 0.34638703646341007 0.38692674851919157 0.9774614683999601 1.0 12.495498527594727 -6.054526596118 1.5770275919926637 0.597437770602086 1.1283545392431253 0.4344663148850302 0.24857536925688825 0.4272685831833207 1.9316119948838106 0.04531157637204284 0.21722637502261286 8.820097863579086e-07 6.054526596118 0.5309167686410393 RGS(ph)RSSPEPK ddPTM_A549_MK2206_60min_R1 1 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGS(0.333)RS(0.333)S(0.333)PEPK 52.343999999999994 0.0047995 2954100.0 295.84 398.78 401.15 106.27 226.4 152.78 172.15 196.57 391.69 667.71 415.62 True False 345.77055940642975 419.07619867290373 458.03910204734285 132.30615477064154 193.09685991026646 168.94707819284383 203.42742665430666 224.43439947037754 302.9728404004008 516.8738472552652 312.4100834715453 1.106784248332122 1.3414298092304493 1.4661469852622782 0.4235015505915709 0.6180877959012931 0.5407862522088911 0.6511551240401466 0.7183967846889914 0.9697921303746777 1.6544723573313942 1.0 8.287297209002448 -8.963847703995068 23.112019710277355 0.9866732350976604 0.8540049433115072 0.07314757221858936 0.371846152117284 251.15805441967663 160565.70315679864 0.05961189591651813 0.06322097231427122 1.0868066721991243e-09 8.963847703995068 -0.13266829178615314 RGS(ph)RSSPEPK ddPTM_A549_PD325901_60min_R1 2 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGS(0.941)RS(0.052)S(0.007)PEPK;RGS(0.409)RS(0.296)S(0.296)PEPK 75.479 0.0005059999999999999 25824300.0 2339.8 2110.5 2159.1 2330.5 2400.8999999999996 2391.7 2080.34 2180.0 2101.2 2375.7 3064.4 True False 2577.33477353028 2288.3592418003955 2305.6295097230295 2474.449692050482 2232.269066655352 2372.2227881656063 2159.5084771057295 2136.518189823084 2012.8938711198286 2225.6978965605 2687.498226832105 0.9590089205633894 0.8514830703712889 0.8579092208149272 0.920726074289264 0.8306122937564296 0.8826881314678557 0.8035385681542403 0.7949840370095834 0.7489842601654596 0.8281672055962792 1.0 11.392048087497628 -11.040057226916044 1.3653721121621925 0.9992113868815258 0.8380748641517706 0.0 0.07503115320981936 0.3029251278602659 1.0146916527771603 0.04413754996985424 0.010095127811850936 9.1189067174747e-12 11.040057226916044 -0.1611365227297552 RGS(ph)S(ph)S(ph)DEEGGPK ddPTM_A549_PD325901_60min_R1 2 RGSSSDEEGGPK 12 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 3 RGS(1)S(1)S(1)DEEGGPK;RGS(1)S(1)S(1)DEEGGPK 46.068999999999996 0.015406 6683800.0 1304.6 1447.1100000000001 915.59 1503.6599999999999 1886.41 1428.8000000000002 1125.38 1516.4299999999998 1400.69 1613.54 1853.3700000000001 True False 1437.04203160424 1569.0630383329863 977.7274432899393 1596.5376631403676 1753.9150693612087 1417.1643265171308 1168.2069517315656 1486.1836140336786 1341.8238703306833 1511.6608090315417 1625.417239480426 0.8841065522742941 0.9653293937220369 0.6015239776849393 0.9822325150499266 1.0790552891649272 0.8718772584017478 0.7187120471941036 0.9143397633144004 0.825525802076275 0.9300140125957769 1.0 10.666594385611434 -10.8938239243626 1.11107720257404 1.0009478803929295 0.8688168765666303 0.06927322383652523 0.12384400529734402 0.8537945216938425 1.8494202490985396 0.08807252610640222 0.020455358166461605 1.2769564192172836e-11 10.8938239243626 -0.13213100382629916 RGS(ph)SAAASPGS(ph)PPPGR ddPTM_A549_PD325901_60min_R1 1 RGSSAAASPGSPPPGR 16 1 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 2 RGS(0.69)S(0.31)AAAS(0.021)PGS(0.979)PPPGR 67.76 0.00053443 3038100.0 361.52 460.85 579.83 509.8 502.34 416.75 356.17 426.08 330.79 559.9 588.82 True False 398.22124426304225 499.6874468532155 619.1807506010393 541.2891881601954 467.0573713789204 413.35612617302235 369.72424425370224 417.581500146706 316.8880466532116 524.5478184468682 516.3988728375147 0.7711504908500117 0.967638531253035 1.1990358290264223 1.0481997863122998 0.9044507955885496 0.8004590015886522 0.7159664044619948 0.8086413857802869 0.6136497644000874 1.0157803319061807 1.0 9.012342041400652 -7.022270038684809 3.439212173468549 0.8034769896112968 1.0078684561970508 0.22798933722053139 0.14262264501229036 0.2713530870065462 6.71046126195588 0.024717978121446948 0.046472854303777 9.500139036286749e-08 7.022270038684809 0.20439146658575402 RGS(ph)SDPTVQR ddPTM_A549_MK2206_60min_R1 2 RGSSDPTVQR 10 1 Q2KHT3;A0A2R8YDG4;H7BZJ9;H7BZI2;H7BXG1;Q2KHT3-2 Q2KHT3 CLEC16A Protein CLEC16A 1 RGS(0.987)S(0.013)DPTVQR;RGS(0.955)S(0.045)DPTVQR 95.273 0.00023452 16607200.0 1096.14 1048.57 1029.21 956.34 1109.14 933.9499999999999 844.13 1019.25 1446.5 1840.27 1924.67 True False 1281.1416339499865 1101.9377341954128 1175.1674541147847 1190.6433429317347 945.986975268874 1032.7799690941642 997.4974944042972 1163.731808822212 1118.8700595858452 1424.5517288769768 1446.7213208103053 0.8855483191693214 0.7616793354356732 0.8122970451949766 0.8229942600589158 0.6538833441253419 0.7138762346543055 0.6894883486237703 0.8043925198879412 0.7733832656583568 0.9846759762129507 1.0 10.498571329679297 -10.498459549348794 0.7032208494270764 1.0095453852955871 0.7628772554960473 0.6544481235569137 0.06249548659213704 0.37862890559332446 0.31886173577159116 0.05257915969472394 0.013037513432237515 3.173514234571302e-11 10.498459549348794 -0.24666812979953978 RGS(ph)SDPTVQR ddPTM_A549_PD325901_60min_R1 2 RGSSDPTVQR 10 1 Q2KHT3;A0A2R8YDG4;H7BZJ9;H7BZI2;H7BXG1;Q2KHT3-2 Q2KHT3 CLEC16A Protein CLEC16A 1 RGS(0.946)S(0.053)DPTVQR;RGS(0.979)S(0.021)DPTVQR 86.772 0.00030924 24231000.0 1130.51 1246.0 1278.65 989.9300000000001 1227.31 920.34 1080.72 1058.2 1269.58 1155.81 1390.03 True False 1245.278542962525 1351.0047928373806 1365.4268781470748 1051.0757278058497 1141.107979589645 912.8450561777544 1121.8473909926756 1037.0933708581592 1216.2239676833772 1082.831959348231 1219.0651221261685 1.0215028880414836 1.1082302071616128 1.120060654155733 0.8621981785293563 0.9360516996823283 0.7488074587727221 0.9202522249476421 0.8507284410281275 0.9976693989589038 0.8882478381956056 1.0 10.251559481054176 -6.245578171590409 24.888808092574624 0.9530000526989487 1.0857611533906348 0.4007846354691933 0.08310255924940173 779.0957296856155 1222525.329149478 0.012976606495128691 0.034211514050825814 5.680961269063781e-07 6.245578171590409 0.13276110069168612 RGS(ph)SGSVDETLFALPAASEPVIR ddPTM_A549_MK2206_60min_R1 2 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RGS(0.57)S(0.106)GS(0.318)VDET(0.006)LFALPAASEPVIR;RGS(0.665)S(0.167)GS(0.167)VDET(0.001)LFALPAASEPVIR 162.12 1.6066e-33 80725000.0 1379.45 1053.67 1097.46 661.25 1453.52 1176.62 926.4 969.74 1736.79 1454.76 1525.2 True False 1612.2674356855055 1107.2973024115515 1253.0963303823437 823.2562796846404 1239.7091334663014 1301.1291474228556 1094.7148884841683 1107.2036147041963 1343.4098380837193 1126.1287056253007 1146.4507466214357 1.4063119941583369 0.965848123589026 1.0930223858941959 0.7180912761501164 1.0813453060410105 1.1349193598218272 0.9548730215495679 0.9657664038050481 1.171798999689012 0.9822739519721858 1.0 10.162958660399498 -8.741673766126175 24.986240603364532 1.0811273370733534 1.030287793154802 0.0 0.16374287202553744 980.7086670781925 1239740.5326824926 0.02696573312035709 0.03055530520537689 1.8127012485164573e-09 8.741673766126175 -0.05083954391855139 RGS(ph)SGSVDETLFALPAASEPVIR ddPTM_A549_PD325901_60min_R1 4 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RGS(0.332)S(0.332)GS(0.332)VDET(0.005)LFALPAASEPVIR;RGS(0.635)S(0.255)GS(0.102)VDET(0.007)LFALPAASEPVIR;RGS(0.332)S(0.332)GS(0.332)VDET(0.005)LFALPAASEPVIR;RGS(0.591)S(0.163)GS(0.239)VDET(0.008)LFALPAASEPVIR 164.01 1.0357e-33 120814500.0 3391.2200000000003 2889.1099999999997 3391.0899999999997 3530.57 3474.1499999999996 2987.96 2951.9900000000002 3591.2400000000002 3587.8999999999996 3688.4500000000003 4151.8099999999995 True False 3735.4941579157844 3132.585439032427 3621.2297596807316 3748.6452903937625 3230.137689166849 2963.627044414982 3064.3295948409104 3519.6099009267214 3437.1130402583435 3455.5606375251846 3641.163690492035 1.0259066813365378 0.8603253534611395 0.9945253955862089 1.0295184751463902 0.8871168570645492 0.8139230466770098 0.8415797407962243 0.966616774224482 0.9439600447608226 0.9490264462837786 1.0 11.830183884041816 -9.85543766108486 0.8662705326360262 0.9929883062247946 0.9249056989256909 0.04855134211580592 0.07047998236241047 0.8314608365487609 1.2872741812932729 0.027211721128447 0.014630972084283201 1.3949618770137584e-10 9.85543766108486 -0.06808260729910376 RGS(ph)SPGSLEIPK ddPTM_A549_MK2206_60min_R1 3 RGSSPGSLEIPK 12 1 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.782)S(0.217)PGS(0.001)LEIPK;RGS(0.762)S(0.234)PGS(0.004)LEIPK;RGS(0.796)S(0.203)PGS(0.001)LEIPK 133.23 2.1965e-08 52802000.0 5707.6 6733.5 5609.1 6145.7699999999995 7842.099999999999 5930.0 5676.0 6611.7 9344.8 8606.900000000001 8629.9 True False 6670.903342577542 7076.206388896122 6404.554723404593 7651.4839258941 6688.53747836705 6557.508663984575 6707.2557286659585 7548.928722482049 7228.217720579188 6662.595312248345 6486.857656876687 1.0283720863684669 1.0908527307354539 0.9873123571033126 1.1795362763637642 1.0310905267478105 1.010891407033264 1.0339760918841234 1.1637265871680513 1.1142864701087727 1.0270913383131446 1.0 12.663304066322317 RGS(ph)SPGSLEIPK ddPTM_A549_PD325901_60min_R1 2 RGSSPGSLEIPK 12 1 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.888)S(0.111)PGS(0.001)LEIPK;RGS(0.65)S(0.336)PGS(0.014)LEIPK 103.16 8.335299999999999e-05 87654000.0 3875.6 4024.2999999999997 4170.6 4009.7999999999997 4577.2 4335.9 4438.6 4336.2 4984.0 4400.299999999999 5371.4 True False 4269.048058934074 4363.4418842820805 4453.641995855153 4257.476239083468 4255.713262482768 4300.589867963064 4607.513351895118 4249.7110893169065 4774.539812326873 4122.464307040103 4710.751852110026 0.9062349690574116 0.926272922299573 0.9454206325600213 0.9037784992169501 0.903404253946546 0.9129306749700169 0.9780844961789558 0.9021301105923013 1.0135409298174505 0.8751181205169152 1.0 12.201741621940831 -8.767454656263004 24.999995188024847 1.0063943340347388 0.9234887036402563 0.0 0.045178536899337304 48.69912809590499 202397.1075791148 0.0036998430827428984 0.003989306843096554 1.7082260628964646e-09 8.767454656263004 -0.08290563039448251 RGS(ph)SPGSLEIPKDLPDILNK ddPTM_A549_MK2206_60min_R1 1 RGSSPGSLEIPKDLPDILNK 20 2 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.799)S(0.198)PGS(0.003)LEIPKDLPDILNK 99.219 8.276899999999999e-08 4730200.0 1713.1 1830.2 1831.5 1548.8 2909.6 1997.5 2314.5 1795.5 2365.9 2432.6 2355.6 True False 2002.2293987261858 1923.3493625837514 2091.2342400591015 1928.256069528275 2481.601694323813 2208.874124166811 2735.0146906267346 2050.0176234881374 1830.0274275659515 1883.073970485927 1770.6395087473475 1.130794489129342 1.0862455926697578 1.1810615485128089 1.0890167422573975 1.401528477176837 1.2475007550969512 1.5446479518361373 1.1577837348373854 1.0335403782222268 1.06349935217368 1.0 10.79005480286071 -8.673055317934908 4.10862571578204 1.0153922920219205 1.2393430805361347 0.3240317982146691 0.1297193558145543 0.17518591053311075 5.564730322282159 0.022834260509445956 0.025708366616841855 2.1229740325476726e-09 8.673055317934908 0.22395078851421424 RGS(ph)SPGSLEIPKDLPDILNK ddPTM_A549_PD325901_60min_R1 1 RGSSPGSLEIPKDLPDILNK 20 2 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.701)S(0.27)PGS(0.029)LEIPKDLPDILNK 88.43299999999999 9.618399999999999e-07 9992700.0 4847.8 4301.5 4430.9 5091.1 5122.6 5788.6 5739.6 5643.5 5824.8 5354.6 6450.6 True False 5339.945087238261 4664.002501115562 4731.607519166213 5405.56568427299 4762.806248010626 5741.459560804211 5958.02361882963 5530.935965259894 5580.003912287634 5016.509642178246 5657.217093722481 0.9439173004627522 0.8244340678194872 0.8363842929797818 0.9555167487334479 0.8418991474263317 1.0148911497802002 1.0531721728411199 0.9776778712270536 0.9863513844076223 0.8867451185044332 1.0 12.465876819622435 -7.267508544160626 24.999498365006428 0.9983833045208795 0.8790438758439965 0.47799504718410435 0.054399178090819095 218.5580819628478 900262.035327865 0.006066850804570077 0.00984917872456663 5.401214884952628e-08 7.267508544160626 -0.11933942867688307 RGS(ph)SS(ph)DEEGGPK ddPTM_A549_PD325901_60min_R1 6 RGSSSDEEGGPK 12 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 2 RGS(0.986)S(0.058)S(0.956)DEEGGPK;RGS(0.776)S(0.448)S(0.776)DEEGGPK;RGS(0.997)S(0.132)S(0.871)DEEGGPK;RGS(0.781)S(0.325)S(0.894)DEEGGPK;RGS(0.995)S(0.031)S(0.974)DEEGGPK;RGS(0.994)S(0.012)S(0.994)DEEGGPK 103.76 0.00031078 89222300.0 10455.5 9877.1 9588.2 10247.8 12523.0 10796.8 10692.1 11029.099999999999 10780.0 11448.2 12827.7 True False 11516.934663067703 10709.477880685463 10238.912910530471 10880.783331557564 11643.427682004653 10708.874440467629 11098.993716441619 10809.115948338422 10326.954088459805 10725.35869823797 11249.97422149008 1.0237298714042977 0.9519557707277104 0.9101276775347409 0.9671829568082677 1.0349737210742211 0.9519021314743261 0.9865794799102692 0.9608125081469506 0.9179535779497974 0.9533674021892449 1.0 13.457634075163226 -5.254653752812686 23.268518761698605 0.9628960250079108 1.0237299472808437 0.21145367561012784 0.033427256721741475 416.2050264733471 1427095.4475157913 0.005274505325111351 0.06936652339684886 5.563476362279503e-06 5.254653752812686 0.06083392227293283 RGS(ph)SSDEEGGPK ddPTM_A549_MK2206_60min_R1 3 RGSSSDEEGGPK 12 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RGS(0.875)S(0.12)S(0.005)DEEGGPK;RGS(0.965)S(0.017)S(0.017)DEEGGPK;RGS(0.731)S(0.135)S(0.135)DEEGGPK 112.24 2.2335e-05 555026700.0 2786.2400000000002 3289.81 2685.2400000000002 2797.1800000000003 1938.71 1340.6 1394.9299999999998 1171.99 1811.46 4963.67 4595.65 True False 3256.4891949721846 3457.247277085375 3066.0474096512685 3482.4892255701825 1653.5283271936078 1482.4614021817406 1648.3707247336156 1338.123171568845 1401.1672023072063 3842.37349958147 3454.423271512456 0.942701267047217 1.0008175042115446 0.8875714319481341 1.0081246424806067 0.4786698667849238 0.42914874225377486 0.4771768237920383 0.3873651450312782 0.405615378364948 1.112305353911988 1.0 11.754229152212993 -6.749934755543279 24.989545575706522 0.6329201763958379 0.9575738837998353 0.3452260322025008 0.2287597968301911 242.7042684340784 527181.7805915482 0.037630129455772834 0.07780445181664286 1.778546582647345e-07 6.749934755543279 0.32465370740399746 RGS(ph)SSDEEGGPK ddPTM_A549_PD325901_60min_R1 7 RGSSSDEEGGPK 12 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RGS(0.974)S(0.01)S(0.016)DEEGGPK;RGS(0.915)S(0.074)S(0.011)DEEGGPK;RGS(0.968)S(0.031)S(0.001)DEEGGPK;RGS(0.957)S(0.021)S(0.021)DEEGGPK;RGS(0.785)S(0.201)S(0.014)DEEGGPK;RGS(0.936)S(0.032)S(0.032)DEEGGPK;RGS(0.333)S(0.333)S(0.333)DEEGGPK 153.72 1.4545e-13 1024982800.0 9107.630000000001 8977.92 9316.57 9811.189999999999 11184.41 9159.630000000001 8323.800000000001 9531.53 10500.15 10248.720000000001 11615.02 True False 10032.229892917163 9734.520826412983 9948.848465286585 10417.204923470828 10398.855625719849 9085.037010145646 8640.566763958133 9341.416156809368 10058.865210755215 9601.614070142505 10186.44617367818 0.9848606395074749 0.9556346404271027 0.9766751127586039 1.0226535089724353 1.0208521645743867 0.8918750322974681 0.8482415374937528 0.91704368702675 0.9874754197148133 0.9425872287975287 1.0 13.31436319436323 -8.935962186490643 10.781619949128482 0.9944863034907121 0.9522782558340046 0.013385663279447235 0.05201472071863668 0.8337853215488862 136.48342244346455 0.009563710624979606 0.01016374176628397 1.1588782539280587e-09 8.935962186490643 -0.04220804765670749 RGS(ph)VKEK ddPTM_A549_MK2206_60min_R1 1 RGSVKEK 7 2 A6QRG9;O15031 A6QRG9 PLXNB2 Plexin-B2 1 RGS(1)VKEK 41.979 0.020974 2051500.0 993.35 1091.4 600.81 608.12 507.32 449.77 364.84 315.19 602.39 1034.6 773.65 True False 1161.0031949242057 1146.9475982536915 686.0138923122623 757.109427299544 432.6939000427402 497.36436286683704 431.1267054345464 359.86914772889213 465.94962681916167 800.8831414390937 581.5313533462322 1.996458468221175 1.9722884959752491 1.179667937704166 1.3019236588758372 0.7440594519159535 0.8552666335270082 0.7413645076121324 0.6188301725403844 0.8012459244682282 1.3771968387098534 1.0 9.183713166679963 -5.875546269619186 1.2026389402030027 0.8600034700129099 2.168021641478345 0.7668885164768954 0.22138789072280185 0.16560335195456397 0.3618663627848824 0.024600917506664932 0.20433302804276382 1.3318451403253586e-06 5.875546269619186 1.3080181714654353 up RGS(ph)VSSVSPKPPSSFK ddPTM_A549_MK2206_60min_R1 2 RGSVSSVSPKPPSSFK 16 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 RGS(0.985)VS(0.012)S(0.003)VSPKPPSSFK;RGS(0.993)VS(0.006)S(0.001)VSPKPPSSFK 87.208 2.7843e-06 14039700.0 4667.5 5954.8 5261.4 4974.2 7073.8 5655.5 5605.9 5659.1 8799.3 7172.2 8827.7 True False 5455.259890581095 6257.873884992747 6007.545635078869 6192.879223300326 6033.2533906062 6253.961256182933 6624.419466055052 6461.294755266899 6806.272599594696 5551.995038690764 6635.538457874403 0.822127687935759 0.943084562725504 0.9053591766844039 0.9332896286587303 0.9092334297974762 0.9424949152033544 0.998324327122819 0.9737408344908726 1.025730261802293 0.8367060298026309 1.0 12.695997826216157 -7.489847238759915 0.7766364475325589 1.0124942173269005 0.8933705380933581 0.02910806127637966 0.060910312821595966 0.23171943990393798 0.2785602985337544 0.005517241448729949 0.012220570035582865 3.237074996452137e-08 7.489847238759915 -0.11912367923354239 RGS(ph)VSSVSPKPPSSFK ddPTM_A549_PD325901_60min_R1 2 RGSVSSVSPKPPSSFK 16 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 RGS(0.949)VS(0.042)S(0.007)VS(0.001)PKPPSSFK;RGS(0.974)VS(0.022)S(0.003)VS(0.001)PKPPSSFK 76.015 9.821e-05 26147000.0 6178.6 7156.9 7458.1 7201.2 8856.7 9099.8 8417.5 7801.8 10585.1 8462.3 9026.099999999999 True False 6805.846923555083 7760.037080142738 7964.251515198609 7646.001768888193 8234.635945956288 9025.69424582907 8737.832568732745 7646.1869786063 10140.245057676804 7927.988933814847 7915.946921162137 0.8597640928289497 0.980304334709143 1.006102187712671 0.965898564636369 1.0402591159299188 1.1401913549597187 1.1038265738459432 0.9659219616752769 1.2809895213633038 1.0015212346384634 1.0 12.950546223369784 -6.4735654429511795 0.7217507210436154 1.1230557453654717 0.8992990990136774 0.26453222295014023 0.09054560141166754 0.8850288869164864 0.7160448927623267 0.019497494628907083 0.11595270773473414 3.3607372296626217e-07 6.4735654429511795 -0.22375664635179426 RGS(ph)WREEEDREVAAAVR ddPTM_A549_MK2206_60min_R1 3 RGSWREEEDREVAAAVR 17 3 Q86UK7-2 Q86UK7-2 ZNF598 Zinc finger protein 598 1 RGS(1)WREEEDREVAAAVR;RGS(1)WREEEDREVAAAVR;RGS(1)WREEEDREVAAAVR 108.37 2.4185000000000003e-09 40245300.0 1452.22 1350.73 1123.31 1221.0919999999999 1737.04 1576.6699999999998 1289.3400000000001 1239.5 1794.4399999999998 1935.52 1819.1499999999999 True False 1697.319232629818 1419.4763875657043 1282.6122490858793 1520.2595948169026 1481.5237170429739 1743.5121728911577 1523.5963885127137 1415.2029208095496 1388.0022051318506 1498.2846877229792 1367.4048490141518 1.241270450264618 1.0380805571876495 0.9379901278034777 1.1117845573773952 1.0834565330897412 1.275051916152093 1.1142247956859084 1.0349553183388653 1.0150631000998342 1.0957140372898246 1.0 10.417224731112157 -8.392165196272911 3.6237598661505146 1.0077322193458509 1.1094978205116857 0.12652305750674775 0.08939904217363222 0.2822034105045216 6.735488355090968 0.014579988562717186 0.017717011918603646 4.053543180622454e-09 8.392165196272911 0.10176560116583477 RGS(ph)WREEEDREVAAAVR ddPTM_A549_PD325901_60min_R1 2 RGSWREEEDREVAAAVR 17 3 Q86UK7-2 Q86UK7-2 ZNF598 Zinc finger protein 598 1 RGS(1)WREEEDREVAAAVR;RGS(1)WREEEDREVAAAVR 173.43 1.7446e-30 52542000.0 3181.4 2630.3 2379.8 2111.2 2015.6000000000001 2634.2 2224.8 1896.6 3408.6 3989.2 4527.2 True False 3504.373385977104 2851.964612038652 2541.3075388999423 2241.6040291169165 1874.0312094425115 2612.7479485662257 2309.465981457274 1858.7708251460829 3265.3483957257977 3737.321231198867 3970.3831002853103 0.8826285266339364 0.7183096794447142 0.6400660779352312 0.5645812941717981 0.47200261589564096 0.6580594070074685 0.5816733355759339 0.4681590612786238 0.8224265299464807 0.9412999040143769 1.0 11.95506250367168 -9.109908906154745 2.131708338670557 0.9375703472203922 0.6207896506593334 0.5689549655548884 0.11544415959743615 0.15084954616995996 1.4118956151997608 0.02446818504163464 0.023505232715603116 7.764099525708588e-10 9.109908906154745 -0.3167806965610588 RGS(ph)YPFIDFR ddPTM_A549_MK2206_60min_R1 2 RGSYPFIDFR 10 1 A1E5M1;Q9NP56 A1E5M1 PDE7B cAMP-specific 3,5-cyclic phosphodiesterase 7B 1 RGS(1)YPFIDFR;RGS(1)YPFIDFR 90.73100000000001 3.9242e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RGS(ph)YPFIDFR ddPTM_A549_PD325901_60min_R1 2 RGSYPFIDFR 10 1 A1E5M1;Q9NP56 A1E5M1 PDE7B cAMP-specific 3,5-cyclic phosphodiesterase 7B 1 RGS(1)YPFIDFR;RGS(1)YPFIDFR 92.85600000000001 0.00025568 4860200.0 406.56 316.65 269.31 401.99 115.52 230.39 394.79 393.07 649.76 364.93 371.02 True False 447.833671906347 343.3352067832714 287.58699609258906 426.8200093144701 107.40627372236506 228.51378022556096 409.81394948737756 385.2299104925502 622.4528468012661 341.88825752065645 325.38689208955975 1.3763113474868707 1.0551599192532057 0.8838309196961548 1.3117308032094661 0.3300878933156363 0.7022832996071171 1.2594666824334768 1.1839134269321432 1.912962267176828 1.050713061380957 1.0 8.346012324318405 -8.10340723094745 2.646067238530634 1.4269451915138145 0.9391481639851149 0.13379705274793652 0.3578898622414236 0.3302090743929575 4.524583576931654 0.06934277716451544 0.09277541981845419 7.881207628745042e-09 8.10340723094745 -0.4877970275286996 RGSDIDNPTLTVMDISPPS(ph)RSPR ddPTM_A549_MK2206_60min_R1 2 RGSDIDNPTLTVMDISPPSRSPR 23 2 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 RGSDIDNPTLT(0.012)VMDIS(0.146)PPS(0.421)RS(0.421)PR;RGSDIDNPTLT(0.006)VMDIS(0.037)PPS(0.479)RS(0.479)PR 84.948 3.8271e-06 4599200.0 1034.51 1125.5500000000002 969.03 885.38 1513.67 1081.87 892.91 953.5899999999999 1720.29 1533.77 1716.37 True False 1209.1099966588217 1182.8356873872485 1106.4530251949059 1102.2981397462179 1291.0111481465237 1196.352765312815 1055.1401889857505 1088.764302746896 1330.6470617386333 1187.2902917504728 1290.1479595978446 0.9371870781671557 0.9168217324127329 0.8576171569808173 0.854396684927377 1.0006690616702196 0.9272988856919429 0.8178443264093918 0.8439065416080475 1.0313910523514007 0.9202745180642429 1.0 10.333320814137993 -8.771632430373538 24.999200037017435 1.0148235618981971 0.8947290741513901 0.29101709648591545 0.0568145212487147 114.93529346439385 281886.3973592123 0.008935413287251748 0.009564405655088783 1.6918722594332924e-09 8.771632430373538 -0.12009448774680698 RGSGDTSSLIDPDTSLSELR ddPTM_A549_PD325901_60min_R1 2 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 0 ; 94.057 2.4759e-06 7030100.0 1498.49 1417.6100000000001 1373.77 1585.67 1389.8400000000001 1683.85 1582.72 1602.96 1587.13 1899.04 2340.5 False True 1650.6156016699667 1537.0769698027284 1467.0022933501011 1683.6132345821436 1292.222433087707 1670.137283878688 1642.9512756976167 1570.9877053022065 1520.4284454932483 1779.1342903078057 2052.633337651918 0.804145373356435 0.7488317283012887 0.7146928126132155 0.8202211294629416 0.629543722877427 0.8136559283350718 0.8004114741588717 0.7653523288768741 0.740720915715284 0.8667569885340664 1.0 11.003260226188228 -10.765331249364055 0.6747910809505487 1.0293106553660893 0.75527995558073 0.4716697511414023 0.06497661233382745 0.3625453689321566 0.24223390704115624 0.05856313431271228 0.009966147020303457 1.7165985867304665e-11 10.765331249364055 -0.2740306997853593 RGSIS(ph)SMSSVSSVLDEKDDDRIR ddPTM_A549_PD325901_60min_R1 1 RGSISSMSSVSSVLDEKDDDRIR 23 3 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 1 RGS(0.4)IS(0.591)S(0.009)MSSVSSVLDEKDDDRIR 135.3 8.5285e-23 15797000.0 1245.7 1345.5 1093.3 1234.3 1630.1 1316.2 1239.6 987.29 1687.5 1349.4 1485.9 True False 1372.162546964129 1458.8900070326602 1167.4979125469818 1310.5399077013121 1515.6073995397107 1305.48130358472 1286.7736563351468 967.5977264359782 1616.5802434393247 1264.1986537099554 1303.1437198961705 1.0529633270791172 1.1195158176021436 0.8959087894311485 1.0056756501161137 1.1630393305049027 1.001793803440756 0.9874380213701003 0.7425103706236429 1.240523373406678 0.9701145272070849 1.0 10.347780487944483 RGSLEMS(ph)SDGEPLSR ddPTM_A549_MK2206_60min_R1 1 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(0.379)LEMS(0.487)S(0.134)DGEPLSR 79.337 0.00018593 4815000.0 1109.1 1663.2 1206.6 1388.9 1966.2 1238.8 1542.8 1523.7 1915.5 2203.2 1952.9 True False 1296.2889651084074 1747.849775898425 1377.714023508224 1729.1805623500902 1676.9745846093897 1369.8889937511121 1823.1067896733332 1739.689141135547 1481.6423084249463 1705.4955898111455 1467.9410327019411 0.8830661015874832 1.1906811901573964 0.938534990722589 1.1779632313753794 1.142399147684219 0.9332043748580615 1.2419482452354793 1.1851219513452917 1.009333669008343 1.1618284057854513 1.0 10.519578300842442 -8.952300996645018 24.993611360567627 1.0041176759370802 1.0905608422896087 0.0 0.12359281939776323 184.20521762468414 96521.12536957864 0.018295912057991384 0.019472964800264433 1.1160894511149868e-09 8.952300996645018 0.08644316635252847 RGSLPDTQPSQGPST(ph)PKGER ddPTM_A549_PD325901_60min_R1 1 RGSLPDTQPSQGPSTPKGER 20 2 A0A494BYR6;Q86Y91-6;Q86Y91 A0A494BYR6 KIF18B Kinesin-like protein KIF18B 1 RGSLPDT(0.001)QPS(0.116)QGPS(0.388)T(0.495)PKGER 55.051 0.0029104 16085000.0 2599.7 2757.3 2484.3 2677.5 3147.7 3175.3 2700.8 2878.3 3475.7 2536.7 3431.7 True False 2863.61963020201 2989.667347745191 2652.8995373094913 2842.883093956303 2926.616410975488 3149.4414095673587 2803.580421934467 2820.89004851733 3329.6284160723353 2376.5323290840706 3009.6226553386414 0.9514879299311351 0.9933694984791357 0.8814724771571033 0.9445978514660082 0.9724197170645589 1.046457237415029 0.9315388482211598 0.9372902757471848 1.1063275358344506 0.7896446170314545 1.0 11.55536689875734 -8.747419889540478 24.9817194018603 1.0502102276412115 0.9581918972495719 0.0 0.09048264998278872 175.58562524992914 312880.8857726883 0.009036485179348233 0.010221526466086572 1.7888754767030209e-09 8.747419889540478 -0.09201833039163965 RGSLT(ph)LTISGESPK ddPTM_A549_MK2206_60min_R1 1 RGSLTLTISGESPK 14 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RGS(0.342)LT(0.608)LT(0.047)IS(0.004)GESPK 71.607 0.0055633 1985400.0 1311.3 1348.9 1863.7 1599.2 1610.7 1255.6 1400.6 1411.4 2662.7 2514.0 2692.5 True False 1532.6153817930356 1417.553248382266 2128.0006842468733 1991.0040717908166 1373.768163681388 1388.466758600174 1655.0708903399461 1611.4702722312193 2059.602701458161 1946.0856539511713 2023.8779407803652 0.7572667061147428 0.7004143974392483 1.0514471457830903 0.9837569903168799 0.6787801457787971 0.6860427353957967 0.817772088420404 0.7962289818771728 1.017651637956003 0.9615627576833023 1.0 10.982906568992314 -8.762420411597905 24.994497050090853 1.0083355073205726 0.811111358182983 0.3458544858321704 0.11220290093804527 20.244996849290548 515794.86082447605 0.020080949360184355 0.021981846660085312 1.7281426493024597e-09 8.762420411597905 -0.19722414913758968 RGSNTTSHLHQAVAK ddPTM_A549_PD325901_60min_R1 1 RGSNTTSHLHQAVAK 15 1 H3BSJ9;H3BRG4;P22695 H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial 0 41.378 0.016843 1707300.0 249.34 121.21 113.29 234.14 213.24 238.78 494.42 285.39 242.35 257.71 150.64 False True 274.6528132455935 131.424792086532 120.97854066811263 248.60229602947845 198.26275803806382 236.83545484725673 513.2354236570055 279.69767256587613 232.16487229482692 241.4381466189362 132.1122349856377 2.078935484479933 0.9947965235832968 0.9157254866005752 1.8817507406222043 1.5007145860458535 1.7926837349546298 3.884844001865541 2.117121647334805 1.7573305933403232 1.827522989412628 1.0 7.045620271315778 -6.278883136409442 24.146000106221848 1.6689046130070617 1.2963167959981095 0.024655919176984065 0.7704111845930477 1619.4265294761328 2241641.762579417 0.1228517017237713 0.28615897528181317 5.261588305608378e-07 6.278883136409442 -0.37258781700895227 RGSRS(ph)S(ph)PEPK ddPTM_A549_PD325901_60min_R1 1 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGS(0.278)RS(0.778)S(0.945)PEPK 59.67 0.0027618 72931000.0 4565.1 3946.7 4293.8 3880.4 4199.9 3548.8 3268.9 3747.1 3815.7 5545.6 5370.2 True False 5028.545591351 4279.302259944853 4585.2030887169385 4120.083494972189 3904.913512868428 3519.89974940089 3393.2997783107166 3672.3611509569178 3655.3393984541835 5195.44986958198 4709.699444502597 1.067699892658878 0.908614723799387 0.9735659658853653 0.8748081578287045 0.8291215944631973 0.7473724790463004 0.7204917889763752 0.7797442690835583 0.7761300782624003 1.1031383065529534 1.0 12.201419280007363 -5.214345751253243 0.9729194339406257 0.856686956959458 1.1687004542350174 0.2323878474125196 0.1103697125574591 2.52481623369581 1.7034351459245134 0.01691108811859425 0.8417062840338735 6.104558342724742e-06 5.214345751253243 0.3120134972755595 RGSRS(ph)SPEPK ddPTM_A549_PD325901_60min_R1 1 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGS(0.083)RS(0.458)S(0.458)PEPK 61.375 0.0024789 19388000.0 1599.6 2090.9 1556.7 1634.2 1713.0 1905.0 1654.2 1737.2 1697.1 1716.7 2054.3 True False 1761.9902144367186 2267.1074810141868 1662.3470231975548 1735.1408224625177 1592.684789529185 1889.486311600738 1717.151486212972 1702.5501831929635 1625.7767888242236 1608.3072690261447 1801.6341232806399 0.9779955828258111 1.2583617570952503 0.9226884647203208 0.96309278340208 0.8840223267025084 1.0487625024331388 0.9531077725627047 0.9450032951711349 0.9023900956448397 0.8926936097866188 1.0 10.815090342360245 -5.789288946141806 24.99998165229655 0.953117346053246 1.1181788825445396 0.4342855053398512 0.0755214039380592 116.48575569623557 104566.87394985677 0.00935149959200373 0.029083701485703575 1.624467600346271e-06 5.789288946141806 0.16506153649129351 RGSRSS(ph)PEPK ddPTM_A549_PD325901_60min_R1 1 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGS(0.067)RS(0.45)S(0.483)PEPK 83.617 0.00019789 11847000.0 1265.3 1441.6 794.43 1214.9 1096.6 1158.7 1072.1 1119.5 1017.7 1248.7 1307.9 True False 1393.7523245353718 1563.0886912956398 848.3447970956723 1289.9416137619091 1019.5785990646256 1149.2639313657614 1112.8993521756304 1097.1706942692401 974.9296081470825 1169.8568688955252 1147.036591461203 1.2150896797109838 1.3627191171856432 0.7395969783448416 1.1245862803022355 0.8888806221654973 1.001941821142533 0.9702387530269759 0.9565263239523693 0.8499551064060873 1.0198949864408873 1.0 10.163695699971866 -5.7485251923429255 24.999985123437966 0.9381112970376837 1.2889045422943193 0.6263092609491221 0.10056108452824339 96.20581684245118 186237.03222535038 0.012688124092077417 0.04851559402839938 1.7843284810802315e-06 5.7485251923429255 0.3507932452566356 RGSS(ph)AAASPGS(ph)PPPGR ddPTM_A549_MK2206_60min_R1 1 RGSSAAASPGSPPPGR 16 1 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 2 RGS(0.465)S(0.533)AAAS(0.018)PGS(0.984)PPPGR 47.75 0.006386800000000001 2725700.0 413.75 375.55 433.14 261.48 184.35 210.4 196.11 297.43 420.34 416.27 512.0 True False 483.5808847837016 394.66389089625613 494.5657650773676 325.5426117382832 157.23235920696828 232.6643883477834 231.74064851104302 339.5916133411731 325.1336611450495 322.2343178879292 384.8562695188663 1.256523338929251 1.0254838550237233 1.2850661513080095 0.845881014606479 0.40854825985694504 0.6045487803502647 0.6021485600345213 0.8823855559524041 0.8448184085750248 0.8372848343896674 1.0 8.588175939560745 -3.6698606813136045 12.871758175916936 0.8910643437339575 0.923891228774757 0.0 0.25659772723191826 0.0 0.0 0.035148943872999404 0.0 0.00021386480430724632 3.6698606813136045 0.03282688504079956 RGSS(ph)AAASPGS(ph)PPPGR ddPTM_A549_PD325901_60min_R1 1 RGSSAAASPGSPPPGR 16 1 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 2 RGS(0.472)S(0.523)AAAS(0.036)PGS(0.969)PPPGR 44.953 0.011615 4912700.0 629.86 546.71 608.84 317.57 734.05 500.03 702.72 522.17 653.56 823.19 474.51 True False 693.8029235215753 592.7831703789122 650.1595436523407 337.1855776462011 682.4928603350253 495.95792146441784 729.4623941431387 511.7549097155594 626.093146016122 771.2136429135161 416.14827816672175 1.6672012355259982 1.4244518155651846 1.5623266459650398 0.8102534489187871 1.6400232708919145 1.1917817457981212 1.7528905738999445 1.2297417448655998 1.5044953418389246 1.8532183920380039 1.0 8.700953857708951 -10.824573049656674 0.9143250131706426 0.9827070817086658 1.416778204367458 0.0 0.3579559544214194 0.6509408616566564 0.9008065113033764 0.19802776491471127 0.04167848248519927 1.4977073129181232e-11 10.824573049656674 0.4340711226587921 RGSS(ph)PGSLEIPKDLPDILNK ddPTM_A549_MK2206_60min_R1 1 RGSSPGSLEIPKDLPDILNK 20 2 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.356)S(0.496)PGS(0.148)LEIPKDLPDILNK 80.082 4.4145e-05 5119200.0 1642.5 1998.7 1695.1 1840.2 3033.8 2055.1 2433.5 2454.1 3296.5 3099.0 2990.0 True False 1919.7138447304656 2100.4252928620613 1935.4906690276732 2291.049082609718 2587.5320388505593 2272.569317935025 2875.6354502657873 2801.976190366046 2549.848013428784 2398.9337476510264 2247.500480198066 0.8541550320653487 0.9345605535429994 0.8611747521660613 1.019376459669461 1.1512932084546328 1.0111540967211496 1.279481573241918 1.246707715995289 1.1345261261986797 1.0673785250713785 1.0 11.134105708646212 -6.441011550212676 3.738417068722449 1.0965728613678016 0.8894229413296502 0.5901711481825274 0.08660979328018475 0.16760584403617448 4.39789773872786 0.014435176031443802 0.03482417566630349 3.6223336456637436e-07 6.441011550212676 -0.20714992003815147 RGSS(ph)SDEEGGPK ddPTM_A549_MK2206_60min_R1 1 RGSSSDEEGGPK 12 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RGS(0.257)S(0.372)S(0.372)DEEGGPK 66.285 0.0025357 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RGSS(ph)YSK ddPTM_A549_PD325901_60min_R1 1 RGSSYSK 7 1 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 RGS(0.221)S(0.779)YSK 53.327 0.018890999999999998 5482700.0 2444.3 2485.3 2092.2 1960.0 2168.3 1768.2 1239.4 2054.7 1800.8 2406.1 3128.8 True False 2692.4435366014445 2694.7449531611082 2234.1892734206476 2081.0647485170325 2016.0060882289158 1753.8003654448407 1286.5660452257032 2013.717396619033 1725.1186384506893 2254.1784353724047 2743.977435097339 0.9812192703056736 0.982057985861504 0.8142156144740282 0.7584117572902743 0.7347021380142656 0.6391453307933733 0.4688690325108537 0.7338680598689395 0.6286927204230064 0.8215003543906478 1.0 11.422052902321857 -5.828694212217421 3.388297180235646 0.7664295673851962 0.9872397394635155 0.3363749500048293 0.12921725730258388 0.3009395709492032 6.814898184968816 0.024439282207678062 0.09403317536496052 1.4835622972455834e-06 5.828694212217421 0.22081017207831932 RGSSAAASPGS(ph)PPPGR ddPTM_A549_MK2206_60min_R1 6 RGSSAAASPGSPPPGR 16 1 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 RGSSAAAS(0.115)PGS(0.885)PPPGR;RGS(0.019)S(0.019)AAAS(0.019)PGS(0.942)PPPGR;RGSSAAAS(0.192)PGS(0.808)PPPGR;RGS(0.021)S(0.021)AAAS(0.021)PGS(0.936)PPPGR;RGSSAAAS(0.001)PGS(0.999)PPPGR;RGSSAAAS(0.001)PGS(0.999)PPPGR 114.75 7.7522e-08 115506000.0 2031.09 2693.75 2524.7129999999997 2143.6099999999997 3079.81 2240.73 2114.9269999999997 2258.81 3489.2400000000002 3355.4100000000003 3763.913 True False 2373.888336617111 2830.850369063479 2882.7552672248626 2668.79454623031 2626.774028799637 2477.842561323805 2499.181859841491 2579.0032348155037 2698.93271117132 2597.4205505665464 2829.229523385868 0.8390582372320823 1.0005728929605087 1.0189188411178949 0.9432937568940826 0.928441473937419 0.8758011822096561 0.8833436238324723 0.9115567377966185 0.9539461852997293 0.9180663954962885 1.0 11.466193505870809 -9.648436565439694 1.0872390612331702 0.9911185865078377 0.929748870220098 0.0 0.05445928304154956 0.5238701243342979 1.2785562098663692 0.015026786613907642 0.010287543238444281 2.246794926695848e-10 9.648436565439694 -0.061369716287739684 RGSSAAASPGS(ph)PPPGR ddPTM_A549_PD325901_60min_R1 4 RGSSAAASPGSPPPGR 16 1 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 RGSSAAAS(0.004)PGS(0.996)PPPGR;RGSSAAAS(0.004)PGS(0.996)PPPGR;RGSSAAAS(0.025)PGS(0.975)PPPGR;RGS(0.018)S(0.018)AAAS(0.113)PGS(0.85)PPPGR 103.27 4.4619e-07 127615400.0 4110.12 3963.49 3732.39 3753.0600000000004 4233.58 3735.1300000000006 3382.4 4094.24 4155.8 4139.4400000000005 4838.030000000001 True False 4527.376356689575 4297.507212169364 3985.6924300843566 3984.8779923823104 3936.2279458581224 3704.712339658403 3511.119082920299 4012.5771713308527 3981.146178183789 3878.0750519587496 4242.9829807990245 1.0670267538610287 1.0128504478139744 0.9393609279417341 0.9391689786207653 0.927702977756669 0.8731386282772088 0.8275119412001735 0.9456972110162029 0.9382894525384291 0.9139973149806138 1.0 12.0508631764498 -5.547244842506984 2.750340066676131 0.9459242812985125 1.0651040840548254 0.44201110126747956 0.04662146131230153 0.27067319231827036 3.7274037114900804 0.00783871754660979 0.054005610756719606 2.836319543738972e-06 5.547244842506984 0.1191798027563129 RGSSS(ph)DEEGGPK ddPTM_A549_MK2206_60min_R1 1 RGSSSDEEGGPK 12 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RGS(0.255)S(0.255)S(0.49)DEEGGPK 64.244 0.0027449 424520000.0 1176.3 1521.4 1062.5 1097.5 971.67 685.53 577.43 629.81 1044.2 1971.8 2185.4 True False 1374.8306822261475 1598.8327615751937 1213.1784766927624 1366.3875492686466 828.7386301634654 758.0723295820144 682.3415566250143 719.0874962122325 807.6903672447561 1526.369010525426 1642.7048660283797 0.8369310340877725 0.9732927652675328 0.7385249181284177 0.8317912593588437 0.5044963628598321 0.46147810556794067 0.4153768401957275 0.43774600726105684 0.49168318907920144 0.9291803062687561 1.0 10.681857588708896 -6.193920991942992 1.9083368977819146 0.6684406607419223 0.8936675430447242 0.20353972983516655 0.198198874053177 0.6355032505167635 4.390964203576754 0.03696896142385975 0.13206737458426893 6.398512284056716e-07 6.193920991942992 0.22522688230280186 RGSSS(ph)DEEGGPK ddPTM_A549_PD325901_60min_R1 2 RGSSSDEEGGPK 12 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RGS(0.285)S(0.122)S(0.593)DEEGGPK;RGS(0.351)S(0.008)S(0.641)DEEGGPK 148.7 1.9824e-12 1020260000.0 9281.5 8921.5 8472.6 8693.2 9629.400000000001 8909.3 8971.5 9006.5 8416.1 9335.6 9604.3 True False 10223.751047320837 9673.346115006978 9047.601585882703 9230.159220310334 8953.064163626577 8836.745614669004 9312.915341893171 8826.858292037437 8062.400584776122 8746.148622776534 8423.031986673926 1.2137851385933032 1.1484399121730955 1.0741502110162835 1.095823835753368 1.0629265302317756 1.0491169484634053 1.105648815845307 1.0479431048109997 0.9571850846027464 1.038361083825137 1.0 13.040123929445611 -2.000000000000015 0.21626708999697067 0.969831311748163 2.2001892588337295 0.673576462951553 0.03787186359013437 16.6982404003075 0.19246086154060865 0.026495271809259393 7.232163696844581 0.009999999999999652 2.000000000000015 1.2303579470855666 RGSVSSVS(ph)PKPPSSFK ddPTM_A549_MK2206_60min_R1 2 RGSVSSVSPKPPSSFK 16 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 RGS(0.069)VS(0.054)S(0.043)VS(0.832)PKPPS(0.002)SFK;RGS(0.112)VS(0.112)S(0.112)VS(0.654)PKPPS(0.009)S(0.003)FK 65.454 0.00057507 16430500.0 5326.7 5414.9 6423.5 5285.799999999999 7553.5 6419.4 6992.4 6436.4 8192.8 7790.3 8724.9 True False 6225.716734688446 5690.495281092095 7334.448889445613 6580.82123728858 6442.390156060946 7098.696647147148 8262.82856890836 7348.779410648311 6337.143881213213 6030.465819401673 6558.266535010071 0.9492930336779742 0.8676828321499984 1.1183517550395428 1.003439125591817 0.9823312489160755 1.0824044142231934 1.2599104542029218 1.1205368631204962 0.9662833688419895 0.919521307529843 1.0 12.679098820263649 -4.093485640573155 12.599834679080239 1.0144059781337602 0.9607864201368823 0.0 0.10677400944560093 0.0 0.0 0.014123562093280822 0.0 8.063328613442179e-05 4.093485640573155 -0.0536195579968779 RGSVSSVS(ph)PKPPSSFK ddPTM_A549_PD325901_60min_R1 1 RGSVSSVSPKPPSSFK 16 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 RGS(0.004)VS(0.009)S(0.064)VS(0.92)PKPPS(0.003)S(0.001)FK 71.1 0.00025072 11560000.0 4120.7 4239.9 4874.1 4602.0 5472.2 4932.1 4947.5 5082.3 4870.1 4218.7 4403.0 True False 4539.030430500993 4597.211252930343 5204.885736344316 4886.255088099683 5087.851550065149 4891.934612832542 5135.779819875884 4980.929539512777 4665.426633228952 3952.330562032155 3861.4589129166425 1.1754703423925768 1.1905373996218365 1.3479065435433972 1.2653909308098763 1.3175982613841115 1.266861754366709 1.3300102204108963 1.289908724096866 1.2082031010670666 1.0235329835600595 1.0 11.914930305413169 -10.03149368705864 0.6819672930350535 1.005868415554343 1.2757635080937972 0.7734912873467603 0.05313670959736343 0.2381126022637582 0.21974092201071357 0.03146147045496636 0.012313585345423176 9.300500339417404e-11 10.03149368705864 0.2698950925394543 RGT(ph)FEK ddPTM_A549_MK2206_60min_R1 1 RGTFEK 6 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RGT(1)FEK 85.161 0.02475 21181000.0 3896.4 5178.2 4042.1 2997.8 6338.3 4393.2 4253.4 4882.8 7655.8 7425.7 8109.2 True False 4554.017062166079 5441.748262119541 4615.330560602182 3732.261134576357 5405.944466295238 4858.085508029859 5026.187723098619 5574.951852947857 5921.7735238004225 5748.229212627369 6095.461837465609 0.7471159993447786 0.8927540532978103 0.7571748759436346 0.6123016162017624 0.8868802086607664 0.79700039760232 0.8245786549273884 0.9146069652477439 0.9715053070142092 0.9430342385700812 1.0 12.573519818941394 -8.322953475490301 1.095116343549143 0.9916759262622483 0.7761825237678796 0.5770896786414215 0.0713564662008938 0.20830961051367658 0.4868600504290824 0.01346886536185392 0.017260121149087537 4.75386149737217e-09 8.322953475490301 -0.21549340249436877 RGT(ph)FEK ddPTM_A549_PD325901_60min_R1 3 RGTFEK 6 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RGT(1)FEK;RGT(1)FEK;RGT(1)FEK 97.635 0.0213 65934000.0 8555.7 9004.2 9189.7 8346.8 10542.6 9574.599999999999 9693.1 9591.0 9274.4 10451.5 10768.0 True False 9424.268365626547 9763.015534242644 9813.36830415531 8862.36287904182 9802.124145995556 9496.627632048507 10061.976224767848 9399.699981006055 8884.629220594774 9791.59050633585 9443.604263976013 0.9979524874392265 1.0338230257577683 1.0391549698444922 0.9384513191481964 1.0379643059998998 1.005614738461115 1.0654805033657229 0.9953508976294743 0.9408091415357662 1.0368488802191003 1.0 13.205121871086591 -8.524455786657146 24.926157053210765 0.9718398777880913 1.0168272793062747 0.008845342381815002 0.03838575814780528 51.99638013431858 821822.1048190597 0.005954225174531518 0.006777064690884646 2.989125939388801e-09 8.524455786657146 0.04498740151818337 RGT(ph)FSDQELDAQSLDDEDDNMHHAVYPAVNR ddPTM_A549_MK2206_60min_R1 2 RGTFSDQELDAQSLDDEDDNMHHAVYPAVNR 31 1 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 RGT(0.5)FS(0.5)DQELDAQSLDDEDDNMHHAVYPAVNR;RGT(0.5)FS(0.5)DQELDAQSLDDEDDNMHHAVYPAVNR 116.51 1.3248e-21 11367000.0 532.77 846.62 787.72 605.38 1014.28 828.4300000000001 1000.5699999999999 741.37 1168.25 716.31 1194.9499999999998 True False 622.6885510240795 889.7093417936054 899.4305408568687 753.6981271765405 865.0807556085908 916.0939127326715 1182.3606174121385 846.4614678504031 903.6432403118995 554.495073501099 898.2109360577522 0.6932542524555085 0.9905349691003983 1.001357815575559 0.8391103881283406 0.9631153673160898 1.0199095512613192 1.316350725589603 0.9423860630839371 1.006047915958349 0.6173328015073808 1.0 9.810910477356737 -7.028716894052948 4.016362760066372 1.0245419574160768 0.8971710654482434 0.042452772989213905 0.17148023489271216 0.2779915424006563 9.929652847427732 0.017291740635616202 0.03191198966891092 9.36015641009987e-08 7.028716894052948 -0.12737089196783336 RGT(ph)GQSDDSDIWDDTALIK ddPTM_A549_PD325901_60min_R1 1 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;Q16637-2;Q16637;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-3 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 RGT(0.657)GQS(0.334)DDS(0.009)DIWDDTALIK 133.58 7.187200000000001e-17 12279000.0 1385.5 1376.7 935.45 1401.0 1609.2 1483.0 1342.4 985.83 1854.0 1682.5 1871.3 True False 1526.1549400488072 1492.7193405290698 998.9352623178213 1487.536588098143 1496.175343438625 1470.922939687083 1393.4857665894656 966.1668472813262 1776.0828274586718 1576.2666628627544 1641.1419631480603 0.929934749289645 0.9095613749743597 0.608683029712829 0.906403359063911 0.9116672274765564 0.8962801346359697 0.8490952019266284 0.5887161921251542 1.0822237608572058 0.9604694159663913 1.0 10.680484325872735 -8.822338149199812 24.9999999661789 1.0388281309415313 0.8294203365155992 0.33624468904353244 0.11687950292833363 48.85918487776033 20057.18621844337 0.01967193342870143 0.020942192850196332 1.5054344524185485e-09 8.822338149199812 -0.20940779442593205 RGT(ph)LSGAPAPPTR ddPTM_A549_PD325901_60min_R1 1 RGTLSGAPAPPTR 13 1 Q9BW19 Q9BW19 KIFC1 Kinesin-like protein KIFC1 1 RGT(0.991)LS(0.009)GAPAPPTR 75.334 0.00066556 13497000.0 3344.8 3393.5 3374.7 3635.0 3625.5 3883.7 3693.0 3799.8 4205.7 4547.0 4488.3 True False 3684.3616336883824 3679.4821544892875 3603.727435719655 3859.5256943160243 3370.8573872960037 3852.072434836633 3833.539135887141 3724.0100081145683 4028.949054715715 4259.901644004128 3936.2675536778916 0.9360038624015438 0.9347642415849822 0.9155189241017105 0.9805039016491237 0.8563588072529289 0.9786104176880481 0.9739020743915731 0.9460764435677147 1.023545528797001 1.082218519425552 1.0 11.942612570696339 -8.208735931488263 1.085407171020391 1.0106973679597269 0.93014768840618 0.503506818753987 0.03988652048603081 0.2629025195048081 0.6074720011513544 0.006164437332836011 0.008320898510839295 6.183922932329665e-09 8.208735931488263 -0.08054967955354686 RGT(ph)SPRPPEGGLGYSQLGDDDLK ddPTM_A549_MK2206_60min_R1 1 RGTSPRPPEGGLGYSQLGDDDLK 23 2 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;P21127-10;P21127-5;P21127-12;P21127-4;Q9UQ88-8;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RGT(0.5)S(0.5)PRPPEGGLGYSQLGDDDLK 78.45 2.7484e-05 13566000.0 2258.2 2601.1 2516.0 2015.1 3026.8 2677.9 2625.6 2502.0 4118.2 3657.0 3613.8 True False 2639.3289523107087 2733.484879803624 2872.8066328084606 2508.7995904612753 2581.5617295777142 2961.273600553843 3102.637533683109 2856.666162053645 3185.434275414053 2830.881160103196 2716.393724193905 0.9716297489584041 1.0062918550641222 1.0575810889347315 0.9235773032886704 0.9503636039888869 1.0901488890137259 1.1421899211624125 1.0516392143783817 1.17267031176025 1.0421468489231123 1.0 11.407476888977532 -7.272437644047598 24.046558356544864 1.0865381041814834 0.9842100593594486 0.4649634325408598 0.05398431876873401 389.35787715365956 851289.0650432436 0.01050613891983443 0.01690047996507846 5.340259434542461e-08 7.272437644047598 -0.10232804482203484 RGT(ph)SPRPPEGGLGYSQLGDDDLK ddPTM_A549_PD325901_60min_R1 2 RGTSPRPPEGGLGYSQLGDDDLK 23 2 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;P21127-10;P21127-5;P21127-12;P21127-4;Q9UQ88-8;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR3 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RGT(0.492)S(0.492)PRPPEGGLGY(0.001)S(0.016)QLGDDDLK;RGT(0.473)S(0.473)PRPPEGGLGY(0.002)S(0.052)QLGDDDLK 48.088 0.004069 42506000.0 3396.9 2908.8 2948.1000000000004 3244.0 3369.8 3074.5 3376.3 3615.1 3502.8 3378.8999999999996 4053.0 True False 3741.750787334387 3153.9347844344866 3148.1757943654593 3444.374512341455 3133.1168731788935 3049.4622913472253 3504.786944082252 3542.993994508912 3355.5894973151203 3165.555677353318 3554.5066940838415 1.052677940813052 0.8873059065225363 0.8856857126209149 0.9690161838981225 0.8814491412813166 0.8579143475584904 0.9860121940171491 0.9967610977933755 0.9440380300591918 0.8905752470862138 1.0 11.795433636523116 -7.813947370623219 24.99991659554975 0.9758583433134709 0.9193452473378042 0.09296571437607148 0.05801471072507395 113.95125619849887 54253.545112886015 0.008013791953935496 0.011072650202275285 1.534802964506914e-08 7.813947370623219 -0.05651309597566667 RGTGQS(ph)DDS(ph)DIWDDTALIK ddPTM_A549_PD325901_60min_R1 2 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;Q16637-2;Q16637;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-3 B4DP61 SMN2;SMN1 Survival motor neuron protein 2 RGT(0.502)GQS(0.617)DDS(0.876)DIWDDT(0.005)ALIK;RGT(0.201)GQS(0.826)DDS(0.971)DIWDDT(0.003)ALIK 55.881 0.0021035999999999997 36244000.0 3183.9 3161.8 2808.4 2987.5 3120.4 3252.1 2663.8999999999996 3281.0 3239.7000000000003 4006.4 4056.1 True False 3507.127184136703 3428.255982338067 2998.9949122811126 3172.0310898952207 2901.233868795603 3225.615975830318 2765.2761722420137 3215.5578811052947 3103.546675360226 3753.4352202634996 3557.2254137363575 0.9859164872132651 0.9637443747870826 0.8430713726210273 0.8917149522339252 0.8155889861779299 0.9067786267843704 0.7773688340254732 0.9039511155768479 0.8724627523956636 1.0551581032142272 1.0 11.796536682445504 -10.643202788493852 0.8533848895413054 1.0020678107081549 0.8816444977843704 0.43959789681833006 0.05997042252146427 0.5511428974844819 0.6959682711163871 0.042303181484087536 0.010608939652634245 2.2740353498493392e-11 10.643202788493852 -0.1204233129237845 RGTGQS(ph)DDSDIWDDTALIK ddPTM_A549_MK2206_60min_R1 2 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;Q16637-2;Q16637;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-3 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 RGT(0.018)GQS(0.735)DDS(0.247)DIWDDTALIK;RGT(0.091)GQS(0.552)DDS(0.357)DIWDDTALIK 180.83 9.621e-37 35412000.0 4126.7 4692.0 3355.8999999999996 2844.9 7034.4 5269.4 3994.2 4364.1 7170.4 7233.799999999999 7184.0 True False 4823.186071871666 4930.802758847648 3831.817082290111 3541.9006277124136 5999.649078413332 5827.004410455367 4719.894438237767 4982.724539495726 5546.315848775903 5599.679555907706 5400.01453168659 0.8931802023068329 0.9131091647836005 0.7095938464249497 0.6559057585732403 1.1110431357560546 1.0790719869850822 0.8740521734787997 0.9227242834732647 1.0270927635899563 1.0369749049839603 1.0 12.398747574301892 -6.767242417289076 24.999998385197163 1.0062344779773857 0.7955764209336235 0.5585351082489405 0.09164984558381786 82.67132340526022 356157.27199272485 0.013564976381379061 0.026136089509483203 1.709061074082834e-07 6.767242417289076 -0.21065805704376228 RGTGQSDDS(ph)DIWDDTALIK ddPTM_A549_PD325901_60min_R1 1 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;Q16637-2;Q16637;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-3 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 RGT(0.014)GQS(0.396)DDS(0.59)DIWDDTALIK 186.82 6.4362e-44 50812000.0 12463.0 15240.0 13549.0 13929.0 12782.0 12497.0 14108.0 12727.0 13424.0 13063.0 15131.0 True False 13728.234585224322 16524.32828478466 14468.516616755738 14789.36269494578 11884.236415506146 12395.228575367148 14644.887660193826 12473.15000086165 12859.835963217487 12238.19995065447 13269.982923311762 1.034532950385907 1.2452411114829618 1.090319158688477 1.1144974926052753 0.895572849203051 0.9340802205247825 1.103610136111534 0.9399522269881528 0.969092126006149 0.9222468500057579 1.0 13.695878893703728 -6.654921899147703 7.571143636258086 0.9816553136619646 1.1298200480393568 0.521480088356375 0.07028312992654843 0.1346344380979952 8.679220345352887 0.008986155266107212 0.018754905709744495 2.2134927347540642e-07 6.654921899147703 0.1481647343773922 RGTQS(ph)PER ddPTM_A549_MK2206_60min_R1 3 RGTQSPER 8 1 Q8TDR2;A0A0C4DGC9 Q8TDR2 STK35 Serine/threonine-protein kinase 35 1 RGT(0.042)QS(0.958)PER;RGT(0.42)QS(0.58)PER;RGTQS(1)PER 74.962 0.0020611 21467900.0 1910.31 1577.96 1068.1 907.29 717.53 554.32 532.78 722.44 692.467 2195.76 2624.16 True False 2232.7236254046 1658.2714239879006 1219.572640899331 1129.5760907297963 611.9822875062432 612.977774472164 629.5792295839763 824.8480823797104 535.6243301425723 1699.7362909784504 1972.5086488684133 1.131920829186461 0.840691585783016 0.6182850663792903 0.5726596389718293 0.31025581959162746 0.3107605002511986 0.3191769171431277 0.4181720991960711 0.27154473084305547 0.86171297243921 1.0 10.94581591070676 -5.466653370567139 1.7689563010507763 0.554752092227719 1.2039268337053342 0.407796438164612 0.22705365745907333 0.6541740654299687 2.7388587360427636 0.043531094324072955 0.6173670399579041 3.4146534132153823e-06 5.466653370567139 0.6491747414776151 RGTQS(ph)PER ddPTM_A549_PD325901_60min_R1 3 RGTQSPER 8 1 Q8TDR2;A0A0C4DGC9 Q8TDR2 STK35 Serine/threonine-protein kinase 35 1 RGTQS(1)PER;RGT(0.121)QS(0.879)PER;RGTQS(1)PER 58.37 0.006169399999999999 37581000.0 926.9199999999998 666.41 796.93 681.47 592.28 854.19 341.05 394.33 657.51 756.3299999999999 1114.8300000000002 True False 1021.0202360375613 722.5707094660983 851.0144621293933 723.5628541693372 550.6802960550758 847.2337598457922 354.028844379721 386.46477880409947 629.8771412526164 708.5751947239143 977.7129774896345 1.0442944499510707 0.7390417495749757 0.8704133848304326 0.7400565102727281 0.5632330844876343 0.8665465012248693 0.3620989518710509 0.3952742652515285 0.6442352262418387 0.7247272062842456 1.0 9.933267192041196 -4.33042580317818 16.035947542257105 0.7628790476126327 0.7238939974812765 0.0 0.215315629935174 0.0 0.0 0.03161351327390969 0.0 4.6727677601809896e-05 4.33042580317818 -0.038985050131356225 RGVGS(ph)PPGR ddPTM_A549_MK2206_60min_R1 2 RGVGSPPGR 9 1 O96028-5;O96028-3;O96028;H0Y9L4;O96028-6 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 RGVGS(1)PPGR;RGVGS(1)PPGR 62.528 0.002986 29043200.0 1819.7799999999997 1820.49 1816.6599999999999 1745.83 2244.18 1449.38 1623.33 1373.0300000000002 2623.58 2860.1 2953.0 True False 2126.914374650598 1913.1451650585147 2074.289704911693 2173.558428373288 1914.0640948472685 1602.7524295794212 1918.268048276128 1567.661207228023 2029.3433189963582 2214.001423574283 2219.6886013461185 0.9582039450762336 0.8618979995204272 0.9344958133558694 0.979217727682678 0.8623119899279991 0.7220618372358358 0.8642059283058012 0.7062527627872319 0.9142468532593597 0.9974378488187998 1.0 11.1161415806947 -9.554343228054961 1.492368002161576 0.9784748292679285 0.8635344327590198 0.26893869252872926 0.08273709043692211 0.36194069172980486 1.63934091886817 0.020840267839066385 0.016243189901894006 2.790337732751245e-10 9.554343228054961 -0.11494039650890875 RGVGS(ph)PPGR ddPTM_A549_PD325901_60min_R1 1 RGVGSPPGR 9 1 O96028-5;O96028-3;O96028;H0Y9L4;O96028-6 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 RGVGS(1)PPGR 50.275 0.011911 29561000.0 995.04 985.6 1194.6 1242.7 1238.9 1135.7 930.38 1085.0 1421.6 1513.3 1394.2 True False 1096.0557282902673 1068.6599709635004 1275.6727397133666 1319.4587566235284 1151.8839379729754 1126.4512357401345 965.7861200234712 1063.3588238339664 1361.8550957471678 1417.7499797386067 1222.7222385619762 0.8964061450123952 0.8740006006763515 1.0433054208727444 1.079115693663446 0.9420650918459514 0.9212650266874475 0.7898655062979116 0.8696650721627224 1.1137894223211509 1.15950289855364 1.0 10.255880993873765 -8.761486737031392 24.999999999871417 1.0537338940742402 0.9298894334484964 0.40376443809832274 0.08555368788087778 1.2229205895009454 645264.3712597423 0.015665109396000864 0.017202745254472317 1.7318619194707772e-09 8.761486737031392 -0.12384446062574384 RGWDS(ph)SHEDDLPVYLAR ddPTM_A549_MK2206_60min_R1 2 RGWDSSHEDDLPVYLAR 17 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 RGWDS(0.5)S(0.5)HEDDLPVYLAR;RGWDS(0.5)S(0.5)HEDDLPVYLAR 146.89 8.560299999999999e-17 8922900.0 2349.3 2254.6 1999.75 1741.28 3162.5 1963.01 2125.29 2282.28 3128.8999999999996 3336.6 3344.4 True False 2745.8044051295483 2369.349509824788 2283.3446200153912 2167.8936781690295 2697.300439338419 2170.734415259421 2511.427682800645 2605.8001791893644 2420.2091458265804 2582.8597426306605 2513.8931792556587 1.0922518219101722 0.9425020638809846 0.9082902324001966 0.8623650742434981 1.0729574596073592 0.8634950892790744 0.9990192517027539 1.0365596281863172 0.962733486767796 1.0274341662343116 1.0 11.295707632498349 RGWDS(ph)SHEDDLPVYLAR ddPTM_A549_PD325901_60min_R1 2 RGWDSSHEDDLPVYLAR 17 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 RGWDS(0.5)S(0.5)HEDDLPVYLAR;RGWDS(0.5)S(0.5)HEDDLPVYLAR 73.21 0.00024941 4883500.0 1251.56 1167.54 1190.63 1428.95 1333.67 1202.95 1059.76 1414.6999999999998 1127.15 1645.6 1828.2 True False 1378.6174498502248 1265.9326932819858 1271.433311639818 1517.2129961190876 1239.997620111726 1193.1535740368022 1100.0897467229236 1386.4826986893202 1079.7798052697096 1541.6965351601475 1603.3429899146502 0.8598393846619257 0.7895582549990595 0.7929889734369933 0.9462809926900623 0.7733826311098502 0.7441661463217653 0.6861225287681484 0.86474491572332 0.6734552819089501 0.9615512992901262 1.0 10.646867366996554 -11.00680100481578 1.286679357814997 1.000059934279637 0.7809382998771226 0.47093158672484403 0.07612297112880578 0.3005342517378463 0.8853895566186503 0.057316564468018694 0.013009985545655307 9.844620862535737e-12 11.00680100481578 -0.21912163440251442 RHAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAK ddPTM_A549_PD325901_60min_R1 2 RHAPSPEPAVQGTGVAGVPEESGDAAAIPAK 31 1 P13051 P13051 UNG Uracil-DNA glycosylase 1 RHAPS(0.994)PEPAVQGT(0.006)GVAGVPEESGDAAAIPAK;RHAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK 94.62899999999999 5.6187e-10 14498600.0 4243.1 4525.6 4877.6 5139.6 5170.7 4702.200000000001 4578.5 5305.6 5034.1 4863.9 5674.1 True False 4673.856388394876 4906.988194594579 5208.623267391527 5457.0614191215 4807.527869946618 4663.906842209444 4752.737322951333 5199.775645837321 4822.534283554316 4556.79252392163 4976.221671083422 0.939237979600954 0.9860871397889778 1.0467024203641448 1.0966274775965497 0.9661000228110667 0.93723856180105 0.9550895512893356 1.04492444057566 0.9691156468325807 0.9157133313415129 1.0 12.280835037946048 RHDEDEDDS(ph)LKDR ddPTM_A549_PD325901_60min_R1 1 RHDEDEDDSLKDR 13 2 H0Y9X0;A0A2C9F2R7;O94915;F2Z2S2 H0Y9X0 FRYL Protein furry homolog-like 1 RHDEDEDDS(1)LKDR 67.605 0.00088105 2666700.0 287.0 394.23 384.9 337.65 338.6 282.91 421.57 301.63 457.09 476.7 389.21 True False 316.13602872176676 427.45314565030526 411.02162859172506 358.5058736412123 314.8179041065862 280.60607475851145 437.61307704195553 295.6137530258425 437.8800968732926 446.6010806458688 341.3396374054705 0.9261626663833217 1.2522810093178316 1.2041426882500632 1.0502907789034486 0.9223010444949301 0.8220729268109731 1.2820458835904947 0.8660399222100563 1.2828281538048967 1.3083774390823542 1.0 8.415064144111728 -7.798431377088528 24.999982106200964 1.1227545313536715 1.0436702240089883 0.09743219793417168 0.16878766457764388 475.89311079405127 321617.0860059425 0.02723271133336514 0.03762794050239739 1.590627999244834e-08 7.798431377088528 -0.07908430734468319 RHDS(ph)DTFPELK ddPTM_A549_MK2206_60min_R1 2 RHDSDTFPELK 11 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2;A0A0U1RRA9 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 RHDS(0.999)DT(0.001)FPELK;RHDS(0.839)DT(0.161)FPELK 92.45700000000001 0.00012266 7270400.0 2172.0 2003.91 1718.37 1693.41 2645.5 2135.2 2337.3 2267.3 3220.7 3109.1 3575.2 True False 2538.58049969837 2105.9004596083505 1962.0607049360394 2108.2955260200642 2256.35045447266 2361.1454467689487 2761.9571554987574 2588.6967183150377 2491.2165924010574 2406.752150636272 2687.3791694997076 0.9446305636770124 0.7836261006668414 0.7301019250295461 0.784517328238632 0.8396100111517611 0.8786052498905498 1.0277511959776533 0.9632792974267784 0.9270059918135153 0.8955759492190757 1.0 11.391984174068392 -7.449249091388151 2.6781241794957857 0.9685482562146129 0.8068662957444211 0.568990365696872 0.059872553269015534 0.13741094791345304 1.9379778179953628 0.008935027671634158 0.01471002723285803 3.554274032458591e-08 7.449249091388151 -0.1616819604701918 RHDS(ph)LHDPAAPSR ddPTM_A549_MK2206_60min_R1 1 RHDSLHDPAAPSR 13 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 RHDS(1)LHDPAAPSR 80.609 0.00014799 5142100.0 363.51 495.71 146.22 202.14 338.66 250.71 252.41 355.38 372.47 530.47 647.85 True False 424.8616010337728 520.9395216513997 166.9561946936619 251.66430907440935 288.84356262018935 277.23996579217095 298.2696297520393 405.7562033056052 288.10613971236756 410.63645857258444 486.9709652496045 0.8724577672017949 1.0697547879150948 0.34284630215702067 0.5167953061542692 0.5931432944305789 0.5693151862761825 0.6124998224466146 0.8332246319811462 0.5916289887317908 0.8432462875114256 1.0 8.927691946601561 -10.844664370219308 0.8341798972210377 1.0252898581165684 0.6571207213904037 0.19113503151687394 0.19209858834310967 0.761458137752412 0.8290517994326393 0.1894077455916376 0.03526638973549595 1.4299986576196595e-11 10.844664370219308 -0.3681691367261647 RHEAIHT(ph)GAK ddPTM_A549_MK2206_60min_R1 1 RHEAIHTGAK 10 1 P56270-3;P56270;P56270-2 P56270-3 MAZ Myc-associated zinc finger protein 1 RHEAIHT(1)GAK 40.725 0.036699 2480400.0 462.36 516.05 435.48 426.56 470.98 429.89 422.11 406.9 533.54 683.53 812.37 True False 540.3950643833049 542.314740772235 497.23761226368407 531.0672191490064 401.6994659034333 475.38067446211306 498.8019231196595 464.57932107898756 412.694041888304 529.120098267798 610.6361087285964 0.8849706996667129 0.8881144318526905 0.8142944794060427 0.8696950795372057 0.6578377206349795 0.7785007595635014 0.8168562520126978 0.7608120686578571 0.6758428399322357 0.8665064032480447 1.0 9.254169092688915 -11.002885282571167 1.2964953629840699 0.9994416887135675 0.7822950250208955 0.2454618023484365 0.08208757658990753 0.3025901218258868 0.9092308021589326 0.05720784784590189 0.013169532296604019 9.933784113393967e-12 11.002885282571167 -0.217146663692672 RHEEQQRELEEEEENS(ph)DEDELDSHTMVK ddPTM_A549_MK2206_60min_R1 2 RHEEQQRELEEEEENSDEDELDSHTMVK 28 2 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 RHEEQQRELEEEEENS(1)DEDELDSHTMVK;RHEEQQRELEEEEENS(1)DEDELDSHTMVK 172.64 1.1273999999999999e-57 28453000.0 1934.03 2455.1000000000004 2210.11 1144.96 1974.0299999999997 2004.91 1949.1200000000001 1371.86 2356.6000000000004 3499.6000000000004 3378.3 True False 2260.4469815062776 2580.0541034200455 2523.536831175005 1425.4752513992069 1683.6528019817276 2217.0682454484527 2303.2498741820623 1566.3253561450488 1822.8338627169044 2709.037929422244 2539.374873663255 0.8901588359206684 1.0160193873613104 0.993763015200114 0.5613488840042127 0.6630186111721745 0.8730763891705958 0.9070145168678607 0.6168153321472764 0.7178277936125744 1.0668129221560092 1.0 11.310257672342757 RHEEQQRELEEEEENS(ph)DEDELDSHTMVK ddPTM_A549_PD325901_60min_R1 1 RHEEQQRELEEEEENSDEDELDSHTMVK 28 2 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 RHEEQQRELEEEEENS(1)DEDELDSHTMVK 126.67 2.7067e-22 16506000.0 4387.0 4249.6 4152.1 4769.4 4580.5 4819.9 4477.3 5060.5 4946.1 5118.7 5575.0 True False 4832.365010461292 4607.728705972496 4433.886474605619 5063.995005906699 4258.781481867149 4780.648332432755 4647.686101572568 4959.564357614548 4738.232617526074 4795.504408437192 4889.310342836767 0.9883530951437958 0.9424087208379377 0.9068531477249382 1.035727873835184 0.8710393047777395 0.9777755955779713 0.9505811199695684 1.0143689006938799 0.9691004017505181 0.980814076460291 1.0 12.255415266171305 -8.226353501353236 23.14262787986045 0.9871728497582396 0.9520008019684862 0.15848357475209596 0.04151052350763372 352.84445047043357 232735.7421175401 0.006118172901194362 0.00789824518120277 5.9380862126041515e-09 8.226353501353236 -0.03517204778975336 RHEHPPNPPVS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 RHEHPPNPPVSPGK 14 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 RHEHPPNPPVS(1)PGK;RHEHPPNPPVS(1)PGK 91.31700000000001 1.4445999999999999e-05 50721000.0 1906.39 1912.2600000000002 1908.91 1411.5700000000002 2044.3000000000002 1722.3200000000002 1605.56 1469.26 2568.7 3032.8999999999996 2625.8 True False 2228.1420252393987 2009.5858660771532 2179.622142064549 1757.4047133677864 1743.5861780678347 1904.5747592165117 1897.2694692947334 1677.532104420039 1986.8935513710046 2347.76578355947 1973.7413916067178 1.1288925867970914 1.018160674251887 1.104309891525472 0.8903925918770831 0.8833914034951023 0.9649565881911707 0.9612553485288503 0.8499249757611099 1.0066635678920328 1.1895002017707492 1.0 10.946717258505227 -6.241519978264709 24.978563732236108 0.9719506279152446 1.077225021498962 0.2519305402255678 0.08829666878888627 729.7136500237573 915046.3216604088 0.00914457475310036 0.024160860791466107 5.734294872340702e-07 6.241519978264709 0.10527439358371748 RHEHPPNPPVS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 RHEHPPNPPVSPGK 14 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 RHEHPPNPPVS(1)PGK;RHEHPPNPPVS(1)PGK 94.384 1.1898e-05 60234000.0 3415.2 3505.6 3088.0 3566.2 3213.5 3308.7 3374.6 3440.1 4034.9 4273.0 3936.1 True False 3761.908589862642 3801.0292149042702 3297.570249652498 3786.4760745721646 2987.794845973166 3281.7550441959884 3503.0222496519777 3371.4845067937563 3865.3271847427172 4003.2020507652596 3451.9846529936844 1.0897813773882745 1.1011141696727655 0.9552679345757599 1.0968982933595597 0.8655295855333666 0.9506864526034127 1.0147850010323862 0.9766800393709412 1.1197405473371869 1.1596813002321837 1.0 11.75321033518732 -11.542549602510519 2.766589537406144 0.9991462088969945 1.0378085182675116 0.0 0.09065479605232472 1.1213463236681531 15.610401221307901 0.07348691440426088 0.011987327099187286 2.8671498882188017e-12 11.542549602510519 0.03866230937051718 RHES(ph)EEGDSHR ddPTM_A549_MK2206_60min_R1 4 RHESEEGDSHR 11 1 H0Y8P7;Q6UN15;Q6UN15-5;Q6UN15-3 H0Y8P7;Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 RHES(1)EEGDSHR;RHES(1)EEGDSHR;RHES(1)EEGDSHR;RHES(1)EEGDSHR 148.7 5.6692e-12 302201000.0 2604.24 2369.2599999999998 1877.5700000000002 283.85 705.1 1258.7199999999998 926.44 1682.3200000000002 628.08 2938.48 3291.12 True False 3043.7720444449724 2489.84521407233 2143.8376588084993 353.3932627425108 601.3807240403221 1391.9169149292857 1094.7621559664 1920.7940118889228 485.8208828376615 2274.6753271370085 2473.8440737088495 1.2303815251709347 1.0064681280981025 0.8666017723560094 0.14285187433527072 0.24309564633906652 0.5626534548891308 0.44253482569946495 0.7764410183739754 0.19638298468395649 0.9194901777809941 1.0 11.272538854832368 -5.926364027233527 3.344343743269445 0.5534932781497882 1.1224233324080832 0.4095032639091233 0.2737554102644488 0.22052426059894775 4.917684515481303 0.0463531699096845 0.1648077973265712 1.1847752488727523e-06 5.926364027233527 0.568930054258295 RHES(ph)EEGDSHR ddPTM_A549_PD325901_60min_R1 4 RHESEEGDSHR 11 1 H0Y8P7;Q6UN15;Q6UN15-5;Q6UN15-3 H0Y8P7;Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 RHES(1)EEGDSHR;RHES(1)EEGDSHR;RHES(1)EEGDSHR;RHES(1)EEGDSHR 141.54 6.9002e-12 390287000.0 2267.13 2465.66 2344.11 2143.59 2537.67 1635.877 1447.2839999999999 1818.54 2373.3 2997.41 2929.81 True False 2497.287368627106 2673.449821434524 2503.195400878538 2275.9946858538906 2359.4328136862387 1622.5549600852908 1502.3611846041929 1782.2677930829677 2273.558454373068 2808.153021058809 2569.4619435957984 0.9719106269899881 1.0404706822367649 0.9742099536121073 0.8857864937547123 0.9182594899165397 0.6314765486717536 0.5846987492259699 0.6936346333228027 0.8848383452573606 1.092895354242522 1.0 11.327250569149111 -6.219668155912073 2.6908373350047543 0.8722566607341775 1.007516080468812 0.15876479978851266 0.14841295964177592 0.5213908871953447 7.398692608530358 0.02363064039758189 0.07065485484872742 6.03020177348507e-07 6.219668155912073 0.1352594197346344 RHGAPAAPS(ph)PPPR ddPTM_A549_MK2206_60min_R1 2 RHGAPAAPSPPPR 13 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR 117.2 6.545499999999999e-06 76400000.0 6320.0 6030.7 5962.6 4503.3 6976.4 4555.0 5188.5 5144.6 7780.5 8332.599999999999 9791.9 True False 7386.6614908350375 6337.636870797632 6808.186338944251 5606.608702160818 5950.180801581197 5037.0070766357085 6131.183288968163 5873.862804676733 6018.2291729054 6450.259872757969 7360.300987308179 1.0035814436899133 0.8610567532124039 0.9249874904143222 0.7617363354879969 0.8084154183152917 0.6843479750789173 0.8330071419009277 0.798046549292671 0.81766074285318 0.8763581657707409 1.0 12.845549048772927 -10.608797992471606 0.869153864518278 1.0010417643364433 0.8281343212837977 0.12901591093844655 0.08603727387946453 0.5083988649916226 0.6792747906828792 0.0557213359651568 0.014847655628769007 2.461512284560196e-11 10.608797992471606 -0.1729074430526456 RHGAPAAPS(ph)PPPR ddPTM_A549_PD325901_60min_R1 2 RHGAPAAPSPPPR 13 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR 114.96 8.0132e-06 131788000.0 5798.200000000001 6128.6 6484.7 6385.6 6774.6 6840.7 5990.2 6721.2 6523.5 7434.4 7837.9 True False 6386.828995590765 6645.078630323574 6924.790737668898 6780.0240092501845 6298.7754671012335 6784.991607226859 6218.160338963216 6587.140393320605 6249.339981082337 6964.990715237356 6873.887988541756 0.9291435947511973 0.9667132547694128 1.0074052340119584 0.9863448488762058 0.9163337368314423 0.9870675254727629 0.9046060030841953 0.9582845115167519 0.9091419574336251 1.013253449408466 1.0 12.746910627543091 RHNS(ph)ASVENVSLR ddPTM_A549_MK2206_60min_R1 2 RHNSASVENVSLR 13 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RHNS(1)ASVENVSLR;RHNS(0.994)AS(0.006)VENVSLR 106.31 3.9458e-05 17379000.0 2827.3 2586.2 3017.2 1964.75 2795.8 2814.4 2191.5 2812.5 3102.7 3898.7 3843.5 True False 3304.4791191515646 2717.8265334466705 3445.0843292963796 2446.113838200979 2384.541523573864 3112.217939952479 2589.667182764523 3211.1804879200113 2399.9434039937796 3017.980962235253 2889.0528747964117 1.143793229947177 0.9407327076484167 1.1924615016051414 0.8466836517740624 0.8253713680272813 1.0772450608650745 0.8963723735748568 1.111499383044798 0.8307024855552015 1.0446264201543651 1.0 11.496380892686636 -6.268921254335001 24.995960077641183 0.9309758657652767 1.0771695042320382 0.2109151003157378 0.11181145635054739 564.297036288488 1885243.824923569 0.015085222836030913 0.035703745509689216 5.383673896853733e-07 6.268921254335001 0.14619363846676148 RHNS(ph)ISEAK ddPTM_A549_MK2206_60min_R1 1 RHNSISEAK 9 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 RHNS(0.966)IS(0.034)EAK 51.013000000000005 0.011265 3698400.0 2420.4 2297.7 2143.4 1315.4 2694.1 2247.3 1800.2 2270.1 2840.4 3136.7 3729.5 True False 2828.9043469014423 2414.6431157298016 2447.366350064253 1637.673059050551 2297.8014588526894 2485.1077943629925 2127.2730378337646 2591.893626889678 2197.0539351867496 2428.117291467238 2803.3622210363515 1.009111247085169 0.8613382521924521 0.873011104915121 0.584181753881642 0.819659137021271 0.8864740259802366 0.7588291737224564 0.924566082627561 0.7837210328012979 0.8661446862794661 1.0 11.452942450984189 -10.870483181082601 0.9191630139618807 1.0090941969769052 0.8262200640300323 0.059412229472237565 0.10936730389373531 0.6931764266311499 0.9504605332896834 0.09059564559319173 0.017916565530651116 1.3474629075144688e-11 10.870483181082601 -0.18287413294687282 RHPKGEEGS(ph)DDDETENGPKPK ddPTM_A549_MK2206_60min_R1 2 RHPKGEEGSDDDETENGPKPK 21 3 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RHPKGEEGS(1)DDDETENGPKPK;RHPKGEEGS(0.98)DDDET(0.02)ENGPKPK 64.028 0.00027149 95520000.0 844.76 734.83 748.2 463.79999999999995 833.97 763.9 657.23 548.54 1113.48 1101.31 1057.97 True False 987.3348356009182 772.2297082873013 854.306010599082 577.431020820773 711.2941177533786 844.7353909642187 776.6401836770838 626.2972248332956 861.2785578621821 852.5233061069864 795.2468505134276 1.2415451063571954 0.9710566068746251 1.0742651920564346 0.7261028703829154 0.8944318575976159 1.0622304136367724 0.9766026525922976 0.7875507138807847 1.0830329693303697 1.0720234925250944 1.0 9.635258942917813 RHPKGEEGS(ph)DDDETENGPKPK ddPTM_A549_PD325901_60min_R1 4 RHPKGEEGSDDDETENGPKPK 21 3 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RHPKGEEGS(1)DDDETENGPKPK;RHPKGEEGS(1)DDDETENGPKPK;RHPKGEEGS(1)DDDETENGPKPK;RHPKGEEGS(1)DDDETENGPKPK 149.04 1.1729e-22 196722000.0 4213.42 5128.7 4269.28 5487.419999999999 4702.05 5974.1 4819.320000000001 6360.360000000001 5369.2699999999995 5966.360000000001 6596.24 True False 4641.163296644132 5560.913548174218 4559.019014066199 5826.365470564966 4371.794229191886 5925.448910306543 5002.721859833097 6233.497630194106 5143.618254039386 5589.643011374632 5784.944297010509 0.8022831436842962 0.9612734821055988 0.7880834766934864 1.0071601680894078 0.7557193301672934 1.024287980330017 0.8647830649671697 1.0775380557104752 0.8891387695292862 0.9662397292681274 1.0 12.498087352410824 -7.284011656309382 24.983464086091644 0.9551384605997969 0.8722264144962627 0.2561837447543509 0.08847273715143163 1011.7054484722681 1119773.8200793094 0.01234038327909782 0.019736379022560334 5.199820402132637e-08 7.284011656309382 -0.0829120461035342 RHPNT(ph)QQR ddPTM_A549_PD325901_60min_R1 3 RHPNTQQR 8 1 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 RHPNT(1)QQR;RHPNT(1)QQR;RHPNT(1)QQR 115.57 0.00080449 45845000.0 2574.0 2051.27 2012.71 1715.53 1392.96 1536.58 1149.99 1268.6100000000001 1931.19 2374.3 3307.57 True False 2835.31058512135 2224.1377218326907 2149.3046040084473 1821.494391848685 1295.1232950511217 1524.0666019314754 1193.753498748674 1243.3065783447082 1850.028800194127 2224.3862927994282 2900.7598584137386 0.9774371969804563 0.7667431398643753 0.7409453760104707 0.6279369822928939 0.44647725363910384 0.5254025415136919 0.4115313080075061 0.42861410079792067 0.6377738559874456 0.766828831537892 1.0 11.502215150547594 -10.351085276873752 0.9117885426811305 0.981939527693362 0.6113665605504264 0.2254311067562007 0.1731535757058957 0.41720039542417076 0.6661684003897129 0.09006687257647414 0.033253350675514236 4.455687491492708e-11 10.351085276873752 -0.37057296714293564 RHPPDDDLSQDSPEQEASKS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RHPPDDDLSQDSPEQEASKSPR 22 2 Q9P0K8-2;Q9P0K8 Q9P0K8-2 FOXJ2 Forkhead box protein J2 1 RHPPDDDLSQDS(0.006)PEQEAS(0.229)KS(0.765)PR 83.557 1.1334e-05 14421000.0 1510.7 2423.4 2572.6 1886.7 2715.7 2197.3 2341.3 2377.9 3194.8 3222.1 3351.8 True False 1765.6692269310909 2546.740708821693 2937.433363896284 2348.9415846971815 2316.2241274660378 2429.8168275503067 2766.683903721917 2714.974607013332 2471.1829010472557 2494.2253721543625 2519.4555550260484 0.7008138021759371 1.0108297817523366 1.1659000525079373 0.9323211040620624 0.9193351805096996 0.9644213896542363 1.0981276880247695 1.0776036916377603 0.9808400454286665 0.9899858591189059 1.0 11.298896291035609 -7.558761293191139 24.986427503558076 1.0070101651067758 0.95902018682003 0.10153904591306961 0.10818817122428419 496.69713283899483 345868.0052387808 0.016401783796963307 0.024327815784618147 2.762095604867887e-08 7.558761293191139 -0.04798997828674578 RHPPLYQAGLTPPLS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 RHPPLYQAGLTPPLSPPK 18 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 RHPPLYQAGLTPPLS(1)PPK;RHPPLYQAGLTPPLS(1)PPK 90.316 1.2993e-06 12296500.0 2562.3 3081.0 3474.4 3128.9 4500.799999999999 3068.9 2916.3999999999996 3205.0 4332.8 4152.700000000001 4738.5 True False 2994.753597779526 3237.8097399849944 3967.122164161255 3895.4806404616575 3838.7382821737087 3393.648961029051 3446.2721295069405 3659.31856490085 3351.4277180598338 3214.6021858245954 3561.799674053023 0.8407978751853141 0.9090375754626998 1.1137971046100439 1.0936832491842345 1.0777524379425734 0.9527905192846989 0.9675648393738489 1.0273791060059418 0.940936612037531 0.902521893424358 1.0 11.798390662028774 -8.754496110094214 24.90540959229216 0.9721089557068194 1.0021011238088364 0.04687298795287975 0.08097205851252869 554.8628449322038 1990280.3004184258 0.014176830162517777 0.015903353265207115 1.759964427449029e-09 8.754496110094214 0.02999216810201699 RHPPLYQAGLTPPLS(ph)PPK ddPTM_A549_PD325901_60min_R1 3 RHPPLYQAGLTPPLSPPK 18 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 RHPPLYQAGLTPPLS(1)PPK;RHPPLYQAGLTPPLS(1)PPK;RHPPLYQAGLT(0.005)PPLS(0.995)PPK 90.316 1.2993e-06 23763000.0 4419.4 4495.7 5094.5 4266.7 6192.1 6208.0 5023.299999999999 5522.3 6391.0 5659.9 5027.0 True False 4868.054234609674 4874.5684166605215 5440.243405717186 4530.244368621237 5757.188257585328 6157.444106255837 5214.464430355231 5412.153394339458 6122.408495301169 5302.532948075423 4408.7108687785485 1.1041899501924897 1.1056675209030074 1.2339760006136278 1.0275666750349541 1.305866596595476 1.3966540990159744 1.1827639837492723 1.2276045210102238 1.3887071929934491 1.2027400085650233 1.0 12.106141150171641 -6.763831575192375 24.99991315557465 1.2142772962047201 1.1252745795560226 0.1936727399228365 0.11341241241361863 149.66537568665368 1564120.8114920887 0.02277815197726119 0.04453315075427654 1.722536466558899e-07 6.763831575192375 -0.08900271664869752 RHPTGT(ph)TPPVK ddPTM_A549_MK2206_60min_R1 1 RHPTGTTPPVK 11 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 RHPT(0.068)GT(0.466)T(0.466)PPVK 47.18899999999999 0.020155000000000003 18357000.0 1951.0 1847.9 2031.5 1635.1 2121.5 2040.1 1576.7 1726.0 2293.2 2879.8 3049.5 True False 2280.2811026296135 1941.9502169809384 2319.5972474365635 2035.699573402429 1809.4301603340555 2255.98202789122 1863.165980864625 1970.6657856533134 1773.7938614879083 2229.2511798920377 2292.2249880816057 0.9947893921783009 0.8471900564203267 1.0119413493427911 0.8880889022617862 0.7893772076223601 0.9841887422138618 0.8128198543127889 0.8597174343268068 0.7738306103068968 0.9725272132897078 1.0 11.162532940126633 -6.485238831151773 24.355099535979516 0.8815083800935288 0.9424152511605246 0.11035919327759114 0.08245567921194898 908.9988071673067 588171.0292886329 0.013426153520836624 0.03119071638092087 3.2716073020997277e-07 6.485238831151773 0.06090687106699577 RHPTGT(ph)TPPVK ddPTM_A549_PD325901_60min_R1 1 RHPTGTTPPVK 11 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 RHPT(0.024)GT(0.562)T(0.414)PPVK 45.79 0.025533 24265000.0 2755.7 2621.2 2454.9 2611.3 3133.7 3365.4 3237.3 3932.1 3280.2 3371.5 4274.0 True False 3035.4566353608793 2842.097723102199 2621.504276512927 2772.5940703074116 2913.5997226781114 3337.993298194816 3360.4972230185326 3853.6711808272216 3142.3446012027707 3158.6229146162086 3748.325095118266 0.8098168003928446 0.7582313836128256 0.6993801791437768 0.7396887943146595 0.7773071035041006 0.8905292933481526 0.8965330214807591 1.0281048423057424 0.8383329944607232 0.8426758177218747 1.0 11.872030369136086 -7.307152132771384 2.1814726017386286 0.9292533490167312 0.7479336729368398 0.6492211352714004 0.05867387769383732 0.16296062093218183 1.5145738506416782 0.010429520119380668 0.018556699592821482 4.930010760913679e-08 7.307152132771384 -0.1813196760798914 RHPTGTT(ph)PPVK ddPTM_A549_PD325901_60min_R1 1 RHPTGTTPPVK 11 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 RHPT(0.031)GT(0.11)T(0.859)PPVK 56.122 0.0097228 21484000.0 2851.3 2617.5 2355.1 2506.4 3488.8 3365.1 2860.2 3377.9 3144.9 3310.2 4380.8 True False 3140.761876983881 2838.085911117049 2514.9312483667754 2661.2146355525974 3243.7587237066086 3337.695741295348 2969.046476161493 3310.5251345887136 3012.730789684347 3101.1934070777343 3841.989372179245 0.8174832287998717 0.7387021764475199 0.6545908915256217 0.692665798303109 0.84429143588877 0.8687415341292699 0.772788831135521 0.8616695190676502 0.7841590639214789 0.8071842752960772 1.0 11.907637812846811 -14.999999999998336 0.17351109710555224 1.9164797061092462 0.7230929882870768 0.1423091586676959 0.08288058418644842 24.249506178131 0.2634945812335359 7.544008199779789 0.08015881300614888 1.0000000000038326e-15 14.999999999998336 -1.1933867178221695 RHS(ph)DENDGGQPHK ddPTM_A549_MK2206_60min_R1 2 RHSDENDGGQPHK 13 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK 122.46 1.6236000000000002e-06 164768000.0 7633.9 5136.4 3917.2000000000003 1938.08 5296.0 5409.8 4702.8 5417.4 6084.1 6701.2 6669.5 True False 8922.315689064177 5397.820820661775 4472.717862494958 2412.909687003719 4516.965415568777 5982.261445265395 5557.237885970799 6185.333040091689 4706.061064311262 5187.394265814473 5013.279081164215 1.7797364847664097 1.0767046344861093 0.8921741219833059 0.4813036832657993 0.9010001921775754 1.1932831482974526 1.1085035953514604 1.2337898888037353 0.9387191473127386 1.0347307983121148 1.0 12.291538833524925 -5.268563832763306 3.6211155143289426 0.9709061467105615 1.8649843258365488 0.5955487242587603 0.18942267394463086 0.14238283321544995 3.3792847240217236 0.026670858807034965 0.33957125231789814 5.388106449654335e-06 5.268563832763306 0.8940781791259873 RHS(ph)DENDGGQPHK ddPTM_A549_PD325901_60min_R1 2 RHSDENDGGQPHK 13 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK 117.07 3.4919999999999998e-06 101227000.0 7898.7 6180.1 7019.3 5401.9 7019.9 4964.0 4552.2 6533.700000000001 7459.700000000001 9739.4 10693.599999999999 True False 8700.57020928439 6700.9187160628335 7495.671908479854 5735.563094394974 6526.846441340294 4923.574829808955 4725.436462059423 6403.380227911504 7146.194750805536 9124.452621863602 9378.354992315551 0.9277288198637687 0.7145089646908697 0.7992523117989954 0.6115745350964628 0.6959478977590707 0.5249934379582816 0.5038662394344592 0.6827828796370274 0.7619880839082115 0.972926769069843 1.0 13.195119174081253 -9.918581634685435 0.8269672944963739 0.9763661009828937 0.6792735248594768 0.49845548410754426 0.11402465427937836 0.3429354799153539 0.4805462077501043 0.04972809035723904 0.02474399048737459 1.2061973369962087e-10 9.918581634685435 -0.2970925761234169 RHS(ph)DENDGGQPHKR ddPTM_A549_MK2206_60min_R1 3 RHSDENDGGQPHKR 14 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR 135.08 1.3439e-09 79003300.0 5071.369999999999 3917.5800000000004 3446.09 1975.22 4923.42 4058.19 4337.0599999999995 3604.845 5748.51 6085.92 6891.5 True False 5927.293272907606 4116.968088662907 3934.797380466976 2459.148988670996 4199.191440015036 4487.624972191497 5125.047662186037 4115.842818124805 4446.48166348415 4711.106445144991 5180.150354275915 1.1442318982141064 0.7947584157020824 0.7595913460733873 0.4747254076594728 0.8106311888319702 0.866311721721981 0.9893627234112242 0.7945411883126934 0.8583692285714905 0.9094536109856821 1.0 12.338778257519904 -7.362210384956065 3.4120769460596154 0.9225572739795876 0.7764462380899271 0.10121884882355803 0.15361386781470818 0.3673411712301306 8.066129544039663 0.023882108631916598 0.0395172180799071 4.342997856790353e-08 7.362210384956065 -0.14611103588966057 RHS(ph)DENDGGQPHKR ddPTM_A549_PD325901_60min_R1 3 RHSDENDGGQPHKR 14 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR 90.42200000000001 1.7645e-05 102036500.0 1414.6 1258.61 1413.66 1168.0900000000001 1616.69 1293.84 1079.0 1590.87 1875.8899999999999 1624.8200000000002 2205.2 True False 1558.2091506265199 1364.6774817921794 1509.5994686281576 1240.2402663751323 1503.139271677721 1283.3033960112841 1120.061935451455 1559.1388498366289 1797.0528668831962 1522.228587906484 1933.9743799145538 0.8057030986601612 0.7056336919274355 0.7805684937226802 0.6412909494850331 0.7772281201285263 0.6635575989729412 0.5791503481555641 0.8061838181669782 0.9292020026462776 0.7870986315618818 1.0 10.917352967680024 -8.691411196831021 2.752914212088326 0.9696264646865715 0.707929052775928 0.47392481610149806 0.0846260705544154 0.08930853460207105 1.3490521617898033 0.011521284438820917 0.0128001371900639 2.035114287073666e-09 8.691411196831021 -0.26169741191064355 RHS(ph)DPWGR ddPTM_A549_MK2206_60min_R1 1 RHSDPWGR 8 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 RHS(1)DPWGR 44.57 0.024333 5588300.0 941.31 870.4 441.59 450.87 749.25 782.13 444.95 623.43 839.23 779.4 1064.9 True False 1100.1801151800512 914.6996422210128 504.2141021390653 561.3331702403236 639.0363175254737 864.8944774641246 525.7916554739105 711.8031116743016 649.1457449749242 603.3329986831912 800.4559402551573 1.3744418147853987 1.1427232858431142 0.6299086267987961 0.7012667930996805 0.7983404024983203 1.0805022912172113 0.6568652052307921 0.8892470851642423 0.8109699888890816 0.7537366747392366 1.0 9.644678183990631 -5.549492131488698 6.090176543435041 0.8664968546950171 1.3225709666256715 0.6001601850442615 0.13978611810538422 0.07923744140233498 9.368595086715203 0.01984569032707242 0.08363410690658356 2.8216807056040258e-06 5.549492131488698 0.4560741119306544 RHS(ph)DPWGR ddPTM_A549_PD325901_60min_R1 1 RHSDPWGR 8 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 RHS(1)DPWGR 45.598 0.020102000000000002 6474800.0 1067.5 1238.3 997.91 928.14 998.86 940.21 927.1 902.54 1043.3 1181.0 1465.2 True False 1175.8718141480347 1342.6558868142274 1065.6341735203134 985.4690998411218 928.7035194799302 932.5532414856315 962.3812978285865 884.5381316710673 999.4537291734797 1106.431458449279 1284.9896886680594 0.9150826847232295 1.0448767788992464 0.8292939491404664 0.7669081771874745 0.7227322737838983 0.7257281904357211 0.7489408719116892 0.6883620463818076 0.7777912445425545 0.8610430637744161 1.0 10.327541067297473 -4.310123759885156 20.011534987118814 0.8507773471609261 0.8208595061671438 0.0 0.1151233828899135 0.0 0.0 0.01831340361857581 0.0 4.896392681258468e-05 4.310123759885156 -0.029917840993782363 RHS(ph)EVETDSK ddPTM_A549_MK2206_60min_R1 3 RHSEVETDSK 10 1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RHS(1)EVETDSK;RHS(0.969)EVET(0.029)DS(0.001)K;RHS(1)EVETDSK 149.3 1.2691e-08 1377990000.0 6871.3099999999995 8851.599999999999 7453.1 7189.18 14173.0 11824.09 11902.9 12512.3 18290.4 18544.9 19237.199999999997 True False 8031.019140599637 9302.10863175955 8510.061651424781 8950.529422734555 12088.170474859571 13075.307355604285 14065.502856366815 14285.956842311665 14147.65360376697 14355.594210007586 14460.072320289713 0.5553927368213005 0.6432961347438944 0.5885213754763765 0.6189823414766453 0.8359688808677673 0.9042352670157542 0.9727131749286443 0.9879588791728422 0.9783943876902765 0.9927747173065291 1.0 13.819787147319975 -6.985564787053894 1.4316249211688354 0.9880519395381375 0.5890112823670962 0.9751682373509426 0.02775090539393793 0.038703100513294425 0.15749018870605935 0.004087276787281515 0.009361593170197335 1.0337968700347407e-07 6.985564787053894 -0.3990406571710413 RHS(ph)EVETDSK ddPTM_A549_PD325901_60min_R1 4 RHSEVETDSK 10 1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RHS(1)EVETDSK;RHS(1)EVETDSK;RHS(0.999)EVET(0.001)DSK;RHS(0.995)EVET(0.005)DSK 148.66 1.3393999999999999e-08 496394600.0 6767.33 7531.71 7195.98 7219.83 7568.849999999999 6705.22 6555.58 7671.900000000001 6929.47 8414.58 8955.6 True False 7454.344359754966 8166.433634238544 7684.342475742999 7665.782501676385 7037.240087114979 6650.6149114286045 6805.056184251022 7518.877936010876 6638.248473781042 7883.281982758789 7854.117974225817 0.9491001261016508 1.0397645745884676 0.9783838874027668 0.9760207991314268 0.8959936825762592 0.8467678908380744 0.8664316230775485 0.9573166535930488 0.8451933744266651 1.0037132124356518 1.0 12.939233553095766 -6.649225692966401 4.91607402712495 0.9151387728152831 0.9915001179637304 0.2682620911008776 0.05517482754081701 0.24810994031549422 9.69125681017406 0.009261490240343598 0.01960207368668291 2.2427161323166807e-07 6.649225692966401 0.07636134514844728 RHS(ph)EVETDSKK ddPTM_A549_MK2206_60min_R1 2 RHSEVETDSKK 11 2 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RHS(1)EVETDSKK;RHS(1)EVETDSKK 129.77 2.0499e-08 138897000.0 4823.4 5254.2 4523.1 3861.2 8810.8 7712.5 6647.8 7497.299999999999 10172.3 11603.5 12421.0 True False 5637.471999192045 5521.616337497291 5164.543593344977 4807.194173335852 7514.742991596183 8528.63163085684 7855.619209483003 8560.065234518295 7868.290291825154 8982.261291019257 9336.522897839528 0.6038085121064242 0.5913996460904084 0.5531549217900009 0.51488056377479 0.8048759772586318 0.9134697921461068 0.8413859522907392 0.9168365277076646 0.8427431044640694 0.962056366090823 1.0 13.188669647013556 -6.91635832591671 3.593219808225231 0.9143818443044462 0.5669767316133608 0.9158464651628653 0.04906321872972439 0.061344603123299986 1.5702129753647043 0.009605468158457814 0.018826469523600987 1.2123881254436647e-07 6.91635832591671 -0.3474051126910854 RHS(ph)EVETDSKK ddPTM_A549_PD325901_60min_R1 4 RHSEVETDSKK 11 2 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RHS(1)EVETDSKK;RHS(1)EVETDSKK;RHS(1)EVETDSKK;RHS(0.982)EVET(0.017)DS(0.001)KK 136.17 8.3466e-09 192537400.0 9832.27 9076.670000000002 8867.87 8027.12 8544.24 7638.859999999999 8101.27 9249.03 9408.17 9282.48 11226.1 True False 10830.434812265394 9841.59283547613 9469.696985034296 8522.936971487778 7944.122058427804 7576.651656815957 8409.568263035046 9064.550840926335 9012.777332692473 8696.38262864205 9845.360868111171 1.1000546305361796 0.9996172783623153 0.9618435638765015 0.8656805053325486 0.8068898809142261 0.7695656622761797 0.8541655685037798 0.9206925944468063 0.9154339240001439 0.883297498704123 1.0 13.265228371753155 -5.473914622124698 1.8509574136880735 0.919748963934713 1.116011532358447 0.4353556879909092 0.06827848198958839 0.55017541721602 2.6165087604607495 0.012200015778983726 0.1603628512132436 3.358036233292382e-06 5.473914622124698 0.19626256842373402 RHS(ph)IEKETPTNVR ddPTM_A549_MK2206_60min_R1 2 RHSIEKETPTNVR 13 2 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 RHS(1)IEKETPTNVR;RHS(1)IEKETPTNVR 93.75399999999999 3.5879e-05 60284000.0 5223.2 6227.6 5460.5 3663.9 6807.9 4921.8 4881.4 5299.200000000001 6934.7 8952.8 10349.6 True False 6104.748465020497 6544.558239769735 6234.881008923132 4561.555664478724 5806.466928370594 5442.621609173573 5768.2871941349495 6050.377828119371 5364.001522440342 6930.3562620103585 7779.508685571211 0.7847215951237486 0.8412559847009414 0.801449199547405 0.5863552376950385 0.7463796446605875 0.6996099405696529 0.7414719138797918 0.777732640024056 0.68950389275727 0.8908475511910168 1.0 12.925463329427268 -10.799711654035658 0.8938527211921835 1.0109032515163225 0.7380236188754876 0.5342193516377447 0.07117978388447825 0.30320673443603957 0.40129963399943674 0.05688171047461387 0.012122518632747135 1.5859458176228963e-11 10.799711654035658 -0.2728796326408349 RHS(ph)IEKETPTNVR ddPTM_A549_PD325901_60min_R1 2 RHSIEKETPTNVR 13 2 J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-5;Q08AE8-2;Q08AE8 J3KNG6 SPIRE1 Protein spire homolog 1 1 RHS(1)IEKETPTNVR;RHS(1)IEKETPTNVR 116.83 3.3337999999999997e-06 94385000.0 13270.5 12623.2 12830.0 12198.0 13909.3 14607.8 13064.8 12701.2 15518.1 15365.2 16276.3 True False 14617.711390774235 13687.001365124257 13700.720953057507 12951.442756332011 12932.358752480026 14488.838920000651 13561.988113332874 12447.86460210135 14865.928222646387 14395.038649758564 14274.418283966645 1.0240495339269402 0.9588482761849435 0.9598094073260045 0.9073184278815319 0.9059814904685782 1.0150213221840956 0.9500904235492392 0.8720400617714194 1.0414384619332713 1.008450107275293 1.0 13.801144333127986 -8.798309261506144 24.99999866945705 1.0195681747261727 0.9492181017695 0.3237406021036042 0.04338179842378007 135.54869847484608 91909.59645704142 0.0076049345392756595 0.008096183145749402 1.5910753173286528e-09 8.798309261506144 -0.07035007295667273 RHS(ph)LENK ddPTM_A549_MK2206_60min_R1 2 RHSLENK 7 1 O14578-4 O14578-4 CIT Citron Rho-interacting kinase 1 RHS(1)LENK;RHS(1)LENK 71.45100000000001 0.008575900000000001 134211000.0 4830.9 4072.7 2483.17 2317.81 4129.1 3643.3 4025.1 4259.0 5261.5 5245.8 5446.2 True False 5646.237815834649 4279.983034091819 2835.3208451474507 2885.6735540504437 3521.7148597856935 4028.8315877731907 4756.408568261684 4862.726292640474 4069.7786508889903 4060.770136633673 4093.758232526657 1.3792308913049331 1.0454899363830346 0.6925960655467184 0.7048959391696694 0.8602644953002269 0.984140088137693 1.161868458784397 1.187839148390356 0.9941424040513339 0.9919418553760992 1.0 11.999210187454729 -7.515009466658551 23.98374621803094 1.0277724668702524 0.9167409101534698 0.08135141144435476 0.18477782342772903 501.2639571747188 1527737.1175943753 0.029225215931061914 0.044483144496275925 3.054854523421971e-08 7.515009466658551 -0.11103155671678255 RHS(ph)LENK ddPTM_A549_PD325901_60min_R1 2 RHSLENK 7 1 O14578-4 O14578-4 CIT Citron Rho-interacting kinase 1 RHS(1)LENK;RHS(1)LENK 118.71 0.0028636 145576000.0 12451.6 10177.400000000001 9532.3 8424.8 9724.0 7769.1 7774.0 7596.299999999999 10117.2 11337.9 12534.3 True False 13715.677265616563 11035.08521558841 10179.219200376465 8945.180761890966 9041.019785978857 7705.831025436892 8069.84382409603 7444.785837317932 9692.009267510717 10622.023059061876 10992.66056147423 1.2477122520898751 1.0038593617875244 0.9260014118921659 0.8137411968528322 0.8224596525489697 0.7009978141636951 0.7341119812594105 0.6772505887618812 0.8816800276248062 0.966283185008794 1.0 13.424252984608621 -2.2678890251762445 15.436422472181894 0.9018683713523877 1.3050116967132137 0.0 0.15891555462702367 0.0 0.0 0.021931473596567826 0.0 0.0053964850072662305 2.2678890251762445 0.403143325360826 RHS(ph)LENKVK ddPTM_A549_PD325901_60min_R1 1 RHSLENKVK 9 2 O14578-4 O14578-4 CIT Citron Rho-interacting kinase 1 RHS(1)LENKVK 56.951 0.0029791 12850000.0 3870.4 3656.3 4143.8 3548.1 3023.3 5192.2 3643.6 4593.2 4381.3 4127.1 5008.6 True False 4263.320158762112 3964.429232785968 4425.023186693663 3767.2580786802473 2810.9538378187867 5149.916444668424 3782.259191854423 4501.5850227043065 4197.169197381168 3866.5142016647064 4392.57395213134 0.9705744752899352 0.902529877923255 1.0073872938545698 0.8576424938394764 0.6399331846091906 1.17241428392335 0.8610576015502748 1.0248171281259983 0.9555147490105752 0.88023884032473 1.0 12.100850859905423 -7.282940416890513 24.998954051681817 0.9845834703542773 0.8834311399789465 0.1725043435785174 0.11576169306389542 1082.325327034222 1258401.6200411024 0.015735532794545634 0.025169209778772055 5.21266221412451e-08 7.282940416890513 -0.10115233037533078 RHS(ph)MREEDFIQPSSR ddPTM_A549_MK2206_60min_R1 4 RHSMREEDFIQPSSR 15 2 Q14289 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 RHS(1)MREEDFIQPSSR;RHS(1)MREEDFIQPSSR;RHS(1)MREEDFIQPSSR;RHS(1)MREEDFIQPSSR 86.213 1.5001e-05 55466900.0 3909.84 3228.7400000000002 3362.94 2936.8900000000003 4728.39 3395.1499999999996 3371.51 3475.7599999999998 4994.720000000001 4914.509999999999 5231.0 True False 4569.725405589628 3393.069074936434 3839.855460149796 3656.428181842004 4032.8500946603567 3754.422519481829 3984.0697254676784 3968.4596240685737 3863.4238949288706 3804.3187777245685 3931.9983317445103 1.1621890499536853 0.8629375672779165 0.976565892500307 0.9299160053864407 1.0256489841568934 0.9548382788392751 1.0132429846937563 1.0092729673941359 0.9825599018539727 0.9675280752310761 1.0 11.941046994238741 -7.7733234559971995 24.93127453104394 0.9946113385539229 0.9786979863187258 0.0 0.06986821079893804 1080.0702917603396 2265843.5739818076 0.009679454793585738 0.013427852104228184 1.6852973737188696e-08 7.7733234559971995 -0.015913352235197076 RHS(ph)MREEDFIQPSSR ddPTM_A549_PD325901_60min_R1 2 RHSMREEDFIQPSSR 15 2 Q14289 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 RHS(1)MREEDFIQPSSR;RHS(1)MREEDFIQPSSR 72.793 0.00038347 31190000.0 4523.1 5027.0 4689.0 4985.5 5793.1 5664.9 4978.2 5079.799999999999 5104.9 4948.1 5270.799999999999 True False 4982.281782269771 5450.642932258033 5007.223737247591 5293.443012107992 5386.212641110051 5618.7669325916095 5167.648125175568 4978.479403973993 4890.358805767944 4635.676121551969 4622.525014354083 1.0778268947812188 1.179148390832378 1.0832226373462388 1.145141020474858 1.1652100582224063 1.215518989111784 1.117927563210311 1.0770043187466987 1.0579410150474406 1.0028450050907347 1.0 12.174465411319561 -8.744931878191899 1.0783808923760971 1.0187317127056745 1.144265744948652 0.6518213895489151 0.039256626704171155 0.2039689243570201 0.47049560384280414 0.008660560018811844 0.009203701479092323 1.799153101423237e-09 8.744931878191899 0.12553403224297743 RHS(ph)PPIEK ddPTM_A549_MK2206_60min_R1 2 RHSPPIEK 8 1 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 RHS(1)PPIEK;RHS(1)PPIEK 113.24 0.00057559 186012000.0 8988.8 8691.0 8176.7 7189.0 10524.0 8200.400000000001 8042.6 7491.6 10373.5 11465.1 12341.6 True False 10505.88968493955 9133.334777737617 9336.279012116438 8950.30532272647 8975.933541058504 9068.16088501503 9503.83631489937 8553.557242062783 8023.918813075538 8875.12594714223 9276.84010916805 1.1324857991846666 0.9845307960747743 1.0064072358959433 0.9648010763795666 0.9675636785189208 0.9775053550888747 1.0244691299041564 0.9220334878478216 0.8649409409509728 0.9566970911109252 1.0 13.17941776079614 -2.000000000000421 0.5634999159628159 0.9432163290040767 9.393322479438721 0.5462911146853562 0.04252294619726835 88.4899889274114 0.7037676278249616 0.009839704464860764 913.5950679164699 0.009999999999990307 2.000000000000421 8.450106150434644 RHS(ph)PPIEK ddPTM_A549_PD325901_60min_R1 5 RHSPPIEK 8 1 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 RHS(1)PPIEK;RHS(1)PPIEK;RHS(1)PPIEK;RHS(1)PPIEK;RHS(1)PPIEK 111.63 0.00062805 313087400.0 22150.0 21461.2 22838.299999999996 22762.0 23899.799999999996 21264.100000000002 21203.800000000003 22283.1 24291.4 23611.600000000002 25320.899999999998 True False 24398.651694031832 23269.810642087963 24388.244375854487 24167.957043747283 22221.160497833975 21090.932219689897 22010.72221216457 21838.646089746213 23270.516933618987 22120.759546419125 22206.58982240995 1.09871222412591 1.0478786174816024 1.0982435651260105 1.0883236569424992 1.000656141962388 0.9497600661946671 0.9911797528656237 0.9834308763476856 1.0479104229743266 0.9961349186580548 1.0 14.43870024051003 -6.759650719694072 24.99959511239223 1.0108045909009324 1.081828322611683 0.6806545406720157 0.0276700715560129 29.791381046383474 416374.63015325885 0.004733246425729507 0.00946408206145838 1.7391990131077088e-07 6.759650719694072 0.07102373171075049 RHS(ph)PS(ph)PRPR ddPTM_A549_MK2206_60min_R1 4 RHSPSPRPR 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR 52.693000000000005 0.0074063 55791000.0 1260.14 1287.45 836.87 635.86 1110.79 999.52 959.1199999999999 1069.02 1295.96 1931.97 1741.89 True False 1472.820824534946 1352.9757058564367 955.5507499198795 791.64572854484 947.394262454615 1105.2885429723212 1133.3796889496282 1220.556858736446 1002.4271292228627 1495.5366351885614 1309.3306392816758 1.1248654696898899 1.0333338770707339 0.7298009542067336 0.6046186538330397 0.7235714448524431 0.8441630477529374 0.8656176331223886 0.9321991116056577 0.7656027432252053 1.1422146479433506 1.0 10.354613745137097 -10.964780994942876 1.1713333979483556 1.0020321975364024 0.8341234185607225 0.2225657638864269 0.14708983943176274 0.8121106152956261 1.9409655420798049 0.11233644507745481 0.024723169213844657 1.0844736521212496e-11 10.964780994942876 -0.1679087789756799 RHS(ph)PS(ph)PRPR ddPTM_A549_PD325901_60min_R1 5 RHSPSPRPR 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR 67.08 0.0016059000000000002 155978000.0 6820.0 6264.13 6692.07 6845.780000000001 6903.88 5565.35 5671.92 6596.93 6944.860000000001 7862.3 8672.69 True False 7512.361379381357 6792.030219066149 7146.234112886013 7268.628282705576 6418.975285893024 5520.027634785912 5887.768019393718 6465.349055958532 6652.991685601201 7365.873036211488 7606.00411071157 0.9876883143938437 0.8929827173641547 0.939551702689976 0.9556434859756562 0.8439352901286435 0.7257460756577861 0.7740947721947647 0.8500322852643941 0.8747026150343205 0.9684287477360282 1.0 12.892923003344185 -4.140407274655068 19.89287141041193 0.9064067254544368 0.8826431255729746 0.0 0.0858893647774563 0.0 0.0 0.012936109109676588 0.0 7.237569136738959e-05 4.140407274655068 -0.02376359988146215 RHS(ph)PSPR ddPTM_A549_MK2206_60min_R1 2 RHSPSPR 7 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RHS(0.928)PS(0.072)PR;RHS(0.958)PS(0.042)PR 81.33800000000001 0.006466500000000001 49773000.0 4399.5 3592.4 3242.0299999999997 2939.41 7167.200000000001 5175.6 4716.5 6333.3 7535.0 5637.9 4952.799999999999 True False 5142.028042552015 3775.2378156189848 3701.7986040397523 3659.565581955127 6112.9143743324275 5723.278556714767 5573.426998635129 7231.064669917799 5828.334530922464 4364.2944743083945 3722.883069673909 1.3811951507255935 1.0140629573814848 0.9943365221954168 0.9829923512144236 1.6419839838987647 1.5373242859373701 1.4970728046861033 1.9423292471421012 1.5655432689786235 1.1722888934813274 1.0 11.862204588616546 -6.741162530921915 24.95486688633446 1.384858416909861 1.080439988319252 0.29671791553064253 0.261193711805933 347.54066057249685 427718.52571231377 0.04663008847304259 0.09697416425004776 1.8148363489929126e-07 6.741162530921915 -0.3044184285906091 RHS(ph)PSPR ddPTM_A549_PD325901_60min_R1 1 RHSPSPR 7 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RHS(0.984)PS(0.016)PR 59.426 0.037814999999999994 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RHS(ph)PSPRPR ddPTM_A549_PD325901_60min_R1 1 RHSPSPRPR 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RHS(0.964)PS(0.036)PRPR 54.343 0.006553699999999999 9974800.0 2936.8 2522.2 2394.2 2370.2 3197.1 2624.0 2574.0 2898.2 2920.5 3246.9 3230.5 True False 3234.9417740421077 2734.754645661669 2556.6848094941765 2516.6018708852403 2972.546725396236 2602.631013984427 2671.954978546845 2840.393127406085 2797.761541312326 3041.89017988058 2833.1689798267553 1.1418103886764708 0.9652635141547032 0.9024116908305676 0.8882639506518695 1.0491949991553287 0.9186289390135758 0.9430976399827135 1.0025498470549299 0.9875025320527847 1.0736705793194827 1.0 11.468200936179652 -8.286398138815787 23.8292514842282 0.994567378190444 0.9672990890639325 0.04583650345913182 0.07197042411426909 1325.351422972796 1265367.607625628 0.01078142513099106 0.013037977551191354 5.171325341018006e-09 8.286398138815787 -0.02726828912651158 RHS(ph)SETFSSTPSATR ddPTM_A549_PD325901_60min_R1 1 RHSSETFSSTPSATR 15 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 RHS(0.497)S(0.497)ET(0.005)FSSTPSATR 58.073 0.003841 8986400.0 1490.9 1203.7 802.49 1402.4 1315.4 1918.9 1467.3 1331.7 1762.2 1583.5 1646.0 True False 1642.2550704574282 1305.140023385517 856.9517971643899 1489.0230629185126 1223.010841883649 1903.2731146092665 1523.138904437369 1305.1381988015607 1688.140862215573 1483.5175397581993 1443.552434853689 1.1376483671851372 0.9041168106358389 0.5936409211565953 1.0314991177091757 0.8472230120325397 1.3184648293029775 1.0551323718225356 0.9041155466817822 1.169435083517887 1.027685246437592 1.0 10.4954077968979 RHS(ph)VADPR ddPTM_A549_MK2206_60min_R1 1 RHSVADPR 8 1 A0A0D9SGD0;A0A0D9SF89;Q9H2X9 A0A0D9SGD0 SLC12A5 Solute carrier family 12 member 5 1 RHS(1)VADPR 42.001000000000005 0.034906 3131200.0 254.19 344.32 114.03 161.13 290.14 171.98 279.51 95.99 262.84 265.42 338.87 True False 297.09105765116425 361.84441729037127 130.2011686562595 200.6068572334006 247.46079034613388 190.17880944891527 330.2933489639572 109.59687645704605 203.30715966923157 205.46143765780423 254.7192266637855 1.1663472033200977 1.420561855615182 0.511155637372115 0.7875607187603075 0.971504167892154 0.7466213365194462 1.2966957904592147 0.4302654255530837 0.7981618126439476 0.8066192738917244 1.0 7.99276405070448 -5.741171751482075 24.999912417001198 0.8638494566539519 1.293454698618863 0.3739793773735852 0.2314649179249808 195.76402028925537 241469.10655556645 0.029844816766609085 0.11530369678948256 1.814797818385696e-06 5.741171751482075 0.42960524196491123 RHS(ph)VTLPSSK ddPTM_A549_MK2206_60min_R1 2 RHSVTLPSSK 10 1 Q07352;G3V2D5;G3V2P5;G3V515 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 RHS(0.937)VT(0.063)LPSSK;RHS(0.992)VT(0.008)LPSSK 69.71600000000001 0.0014505999999999998 52243000.0 2925.3 3617.3 2866.8 2383.54 4028.2 2900.3 2488.3 2980.3999999999996 4029.4 4864.4 4340.4 True False 3419.019123281604 3801.405119262485 3273.3553477485284 2967.507407001177 3435.6571161242723 3207.2078209366723 2940.391900923098 3402.8808270921995 3116.747333629592 3765.5286615274767 3262.5588910540782 1.0479562936493005 1.1651606135557955 1.0033091990229062 0.9095643959525356 1.053055969516697 0.9830344609964963 0.9012532797448161 1.0430097787423496 0.955307609059778 1.1541641966532894 1.0 11.671788228050314 -5.8935557942613235 6.484347274922438 0.9786571759868243 1.1051868134571377 0.19989876616347768 0.07336586025480236 0.11477431917450624 6.182249767936596 0.006351010111564031 0.020155990236069104 1.2777450457936386e-06 5.8935557942613235 0.12652963747031332 RHS(ph)VTLPSSK ddPTM_A549_PD325901_60min_R1 1 RHSVTLPSSK 10 1 Q07352;G3V2D5;G3V2P5;G3V515 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 RHS(0.642)VT(0.358)LPSSK 97.79700000000001 0.00021243 39137000.0 4405.4 4760.1 4838.7 4165.7 6523.7 5741.1 5229.1 5401.7 6673.1 6388.4 6843.3 True False 4852.632964915928 5161.250332572404 5167.083279466823 4423.005828008878 6065.497817543224 5694.34638505564 5428.0962619733145 5293.958855948327 6392.6528133303445 5985.035333748832 6001.617483252881 0.8085541903423337 0.8599765558159168 0.8609484516274536 0.7369689655082126 1.01064385300606 0.9488019522979162 0.9044388912022567 0.8820886820462602 1.0651549904952493 0.9972370532526739 1.0 12.551135655480968 -7.543549062986056 0.5684025523462654 1.0292600170916948 0.8185836074515971 0.46965817533204357 0.06838097140926616 0.4798566838890556 0.3072302878138823 0.016987265682090056 0.04152327214587635 2.8605591801380072e-08 7.543549062986056 -0.2106764096400977 RHS(ph)VVAGGGGGEGR ddPTM_A549_MK2206_60min_R1 2 RHSVVAGGGGGEGR 14 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 RHS(1)VVAGGGGGEGR;RHS(1)VVAGGGGGEGR 69.737 0.0011204000000000001 50678000.0 554.4200000000001 173.57 555.01 342.76 609.54 329.177 437.55 397.18 719.1099999999999 687.0699999999999 657.38 True False 647.9925417323985 182.40397162258867 633.718763622824 426.7362153870812 519.8774734527553 364.0102916499918 517.0471712610621 453.48148131273604 556.2327331827008 531.860409809161 494.134403234985 1.31136900707609 0.36913837698494895 1.282482578573789 0.8636035309287043 1.0520973039910526 0.7366625138158761 1.046369505697382 0.9177290193597055 1.1256709298951304 1.0763476623509565 1.0 8.948759694150809 -8.747022418553033 24.67644025803139 1.0593446071914432 0.9362902958455419 0.04364570445962224 0.24521092204226955 464.2531103802476 794626.6866606683 0.036770817465016245 0.04159793539082811 1.7905134242258145e-09 8.747022418553033 -0.12305431134590128 RHS(ph)VVAGGGGGEGR ddPTM_A549_PD325901_60min_R1 2 RHSVVAGGGGGEGR 14 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 RHS(1)VVAGGGGGEGR;RHS(1)VVAGGGGGEGR 95.414 2.0961999999999997e-05 85725000.0 849.75 942.5500000000001 590.37 894.79 907.3500000000001 906.99 738.47 1096.46 1123.05 1131.7 888.8199999999999 True False 936.0159944471121 1021.9819963795134 630.4360583832081 950.059146084467 843.6208661875686 899.6037741515761 766.57287995629 1074.59024514377 1075.8521140115754 1060.24426886287 779.5007746942013 1.2007890496507998 1.3110724576001065 0.8087689952977002 1.218804620761507 1.0822578932247011 1.1540768185951982 0.9834151611421004 1.3785621259521297 1.3801809426470846 1.3601580694756907 1.0 9.606406646497563 -8.237883408353607 24.879403632143987 1.1994736123666698 1.1097129357822408 0.14001369882750503 0.16523231843284744 2028.7492313242042 2142732.1067359005 0.030074099047330227 0.038813763968985025 5.782512651689909e-09 8.237883408353607 -0.08976067658442899 RHS(ph)WGPGK ddPTM_A549_MK2206_60min_R1 5 RHSWGPGK 8 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RHS(1)WGPGK;RHS(1)WGPGK;RHS(1)WGPGK;RHS(1)WGPGK;RHS(1)WGPGK 84.68700000000001 0.0013039999999999998 265838100.0 14820.81 11905.35 9654.599999999999 6495.94 18219.63 14210.800000000001 12732.68 11622.759999999998 18435.379999999997 17666.45 20973.780000000002 True False 17322.200393984618 12511.281463138715 11023.767455132187 8087.445591613824 15539.546562397929 15714.577423634415 15046.043141520508 13270.32182320967 14259.795865252456 13675.586675117604 15765.411579119944 1.0987471089512513 0.7935905383979275 0.6992375301975817 0.5129866449110034 0.9856733827982547 0.9967755896996147 0.9543704625794747 0.8417364657187367 0.9044988006617246 0.8674424138238072 1.0 13.94447521372575 RHS(ph)WGPGK ddPTM_A549_PD325901_60min_R1 3 RHSWGPGK 8 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RHS(1)WGPGK;RHS(1)WGPGK;RHS(1)WGPGK 103.08 0.00090656 267608000.0 25202.92 19377.66 19833.1 18575.260000000002 14951.79 18675.54 14097.8 13355.2 27274.92 23591.120000000003 32648.6 True False 27761.501884990903 21010.683414103678 21179.093432118847 19722.611622723707 13901.627851275292 18523.452594095557 14634.29949361217 13088.820059048277 26128.649963489243 22101.57265711427 28633.02917652741 0.9695621694036145 0.733791848727192 0.7396735183534441 0.6888063257691148 0.48551020451135063 0.6469260545189046 0.5110985429934524 0.45712313490666723 0.9125353032821554 0.7718908300220134 1.0 14.805392685121735 -8.901085809770528 7.120748854009343 0.9617230688448041 0.6504397443942105 0.32413961676942926 0.14770139186281492 0.13444584517526975 8.4468970080127 0.02481085136931775 0.026315982769035722 1.2557818164114753e-09 8.901085809770528 -0.3112833244505936 RHT(ph)LEDR ddPTM_A549_MK2206_60min_R1 1 RHTLEDR 7 1 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 RHT(1)LEDR 61.65 0.017211 2478700.0 284.96 294.59 207.98 116.09 209.48 210.57 146.98 199.07 435.32 389.08 364.44 True False 333.0542813968912 309.5833727043751 237.4746913718219 144.5320552114781 178.66576949647796 232.8523776349464 173.68436346006382 227.28878212630644 336.72071506319384 301.18655777220414 273.93948996768694 1.2157950700579068 1.130115898006865 0.8668873969205159 0.5276057688087492 0.6522088856833048 0.8500139124242838 0.6340245558628699 0.8297043341692603 1.2291791705639532 1.09946381884456 1.0 8.097713443674637 -8.74442121085148 24.207241034451222 1.1082234810441256 0.8259973770632825 0.2707095864580702 0.197531532316433 168.4495294362438 239608.10706511544 0.03711468453227934 0.0420249679761786 1.8012698888769247e-09 8.74442121085148 -0.28222610398084313 RHT(ph)LEDR ddPTM_A549_PD325901_60min_R1 1 RHTLEDR 7 1 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 RHT(1)LEDR 61.65 0.017211 2479200.0 204.38 195.74 228.23 171.38 180.1 159.82 261.29 186.29 268.25 369.44 297.44 True False 225.12850714339615 212.23569674958978 243.7190602584812 181.9657533677801 167.4503973112703 158.51847890815208 271.23353393337413 182.57429980832214 256.97638536450313 346.11349535097514 260.85676562750973 0.8630349556080453 0.8136100907294527 0.9343022392852164 0.6975696142288983 0.6419246857886025 0.6076839852201052 1.0397795636271971 0.699902490047082 0.9851244791229697 1.326833500056532 1.0 8.027114041621031 -8.779887369840463 23.733178435177503 0.9929755243864786 0.7876097892602757 0.4004190376924921 0.15737697320787766 100.92706570912534 129841.09549949244 0.02078696453501799 0.02215305613867828 1.660017361394361e-09 8.779887369840463 -0.20536573512620293 RHT(ph)LGGHR ddPTM_A549_PD325901_60min_R1 2 RHTLGGHR 8 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 RHT(1)LGGHR;RHT(1)LGGHR 74.84100000000001 0.0021927 5951000.0 896.86 934.29 1070.6 619.43 889.14 809.58 802.8 868.76 807.86 810.25 1048.4 True False 987.9085669665641 1013.0258971910406 1143.2573540407916 657.6907842724006 826.6898737664792 802.9870488953932 833.3509933090164 851.4319002709648 773.9084536088261 759.0906767218703 919.4534463551686 1.0744519702250945 1.1017696450068302 1.2434097219090432 0.7153062364163963 0.8991100931141037 0.8733308380957588 0.9063547443457052 0.9260195865773847 0.8417048809558532 0.8255890276239685 1.0 9.84463271991733 -6.248329506351196 24.9827091207491 0.9056404908083838 1.1360663635849324 0.6656152105241788 0.08181156831291465 418.55229628198737 797608.8942523212 0.012040935159509632 0.03164369494833652 5.645085104196289e-07 6.248329506351196 0.23042587277654858 RHT(ph)MDKDSR ddPTM_A549_MK2206_60min_R1 3 RHTMDKDSR 9 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR 55.452 0.0060938 49949300.0 995.8800000000001 1206.41 907.64 1056.02 2650.16 2882.1800000000003 2552.8799999999997 2986.44 4268.8 5167.1 4584.2 True False 1163.960197071645 1267.8111160062635 1036.3570000803945 1314.7449474065393 2260.3249746457222 3187.170374563758 3016.7052509860378 3409.777015588924 3301.923615872835 3999.848521293198 3445.816622516382 0.3377893615887308 0.36792762206841323 0.3007580244718805 0.38154814705328643 0.6559620613226572 0.9249390561695816 0.8754688892245879 0.9895410548861014 0.9582412465877346 1.1607839184350508 1.0 11.75063021175436 -7.016313623679613 1.6890726399905611 0.9741359528897295 0.32910458716011715 0.9531963177290143 0.06628504953541067 0.02952272748367115 0.16721494725123193 0.005637826420727381 0.012007399838042788 9.63133250366695e-08 7.016313623679613 -0.6450313657296124 down RHT(ph)MDKDSR ddPTM_A549_PD325901_60min_R1 2 RHTMDKDSR 9 2 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 RHT(1)MDKDSR;RHT(1)MDKDSR 75.08800000000001 0.00072564 66184000.0 4405.200000000001 4419.9 4653.799999999999 4453.6 4843.8 3568.0 4369.6 3988.6 5046.4 4613.1 5263.9 True False 4852.412661063161 4792.380484640397 4969.634853572796 4728.6887571405405 4503.588198202839 3538.94339096663 4535.887519136868 3909.0442440038323 4834.317357328715 4321.828078723427 4616.473670611381 1.0511080550407501 1.0381041519090306 1.0765002051695107 1.0243075330946918 0.9755472508968968 0.7665901819164824 0.9825437861830498 0.8467597830978508 1.047188330804123 0.9361751819871351 1.0 12.172575543130504 -6.570883096847156 4.3905185662711546 0.9840132964059631 1.053355592132772 0.18077166555637847 0.08175820661183049 0.3756563473087265 15.568829953115353 0.012923997070362602 0.028208796828091427 2.686067382513924e-07 6.570883096847156 0.06934229572680883 RHT(ph)PLSK ddPTM_A549_MK2206_60min_R1 2 RHTPLSK 7 1 A8MUA9;A8MU27;P55854;P55854-2;P61956-2;P61956 A8MUA9;P61956-2 SUMO3;SUMO2 Small ubiquitin-related modifier 3;Small ubiquitin-related modifier 2 1 RHT(1)PLSK;RHT(1)PLSK 60.102 0.01793 46652000.0 5809.200000000001 5188.6 4300.299999999999 2952.1 5267.2 4336.0 4375.9 4228.6 5842.1 7008.0 7551.200000000001 True False 6789.650938696031 5452.677577697546 4910.147203126481 3675.364632524805 4492.401857417652 4794.83264199614 5170.9443874329345 4828.016999544381 4518.87367791667 5424.887932732621 5676.028637482153 1.1961974423208466 0.9606501175294134 0.8650673766340595 0.6475239762277119 0.7914692022079808 0.8447513126225338 0.9110144993431059 0.8505977168018758 0.7961329948330231 0.9557541512227226 1.0 12.470666152962817 -5.316782910660044 2.575626573938239 0.8688727743748167 1.2428098979493203 0.5534528391354093 0.08944366302545952 0.3030467951382463 2.7672143910048526 0.014937025576589696 0.2308479135810401 4.821887674910959e-06 5.316782910660044 0.3739371235745036 RHT(ph)PLSK ddPTM_A549_PD325901_60min_R1 1 RHTPLSK 7 1 A8MUA9;A8MU27;P55854;P55854-2;P61956-2;P61956 A8MUA9;P61956-2 SUMO3;SUMO2 Small ubiquitin-related modifier 3;Small ubiquitin-related modifier 2 1 RHT(1)PLSK 88.49600000000001 0.0078893 37565000.0 3392.4 3219.3 3053.7 2771.7 3570.8 3127.5 2880.9 2576.3 3503.3 3370.1 4396.4 True False 3736.7939506471153 3490.6017091343324 3260.942445389843 2942.9016140125805 3319.9993265912503 3102.0306769193207 2990.534225988971 2524.913675431748 3356.068484053917 3157.311310855135 3855.6706710757944 0.9691683417568673 0.9053163526957551 0.845752327825236 0.7632658141914033 0.8610692172173815 0.804537249560737 0.7756197251033796 0.6548571936843496 0.8704240507962056 0.8188747380683824 1.0 11.912766114887576 -9.896594595411761 1.0895349437978772 0.980036957545144 0.8246985513854154 0.004467510154589127 0.09218198110475347 0.3402227836261335 0.8197678299757426 0.026827164353734074 0.015906378804469243 1.268835744174629e-10 9.896594595411761 -0.1553384061597286 RHT(ph)RDSEAQR ddPTM_A549_MK2206_60min_R1 2 RHTRDSEAQR 10 2 F8VSL7;P27105-2;P27105 F8VSL7 STOM Erythrocyte band 7 integral membrane protein 1 RHT(0.989)RDS(0.011)EAQR;RHT(0.986)RDS(0.014)EAQR 122.46 1.2497e-05 12967300.0 485.83000000000004 538.31 471.32 0.0 488.21000000000004 422.53 217.881 546.97 472.28 828.93 847.4200000000001 True False 567.8262265968963 565.7076796920882 538.1602631857254 0.0 416.3949557278764 467.24184414728563 257.4671574026545 624.5046725253721 365.3093340761857 641.6741372831123 636.9822263978077 0.8914318219018529 0.8881059097852956 0.8448591512970001 0.0 0.6536994887324057 0.7335241468032486 0.40419833824666446 0.9804114567795756 0.5735000427595023 1.0073658427046508 1.0 9.315109307553822 -10.906460267091122 0.8141374716679941 1.0348148339773773 0.6509750994265743 0.1989654389970713 0.26245415214626133 1.1099326407478012 1.0978973440837119 0.2897811205144806 0.04798340450554717 1.240337096389135e-11 10.906460267091122 -0.383839734550803 RHT(ph)RDSEAQR ddPTM_A549_PD325901_60min_R1 2 RHTRDSEAQR 10 2 F8VSL7;P27105-2;P27105 F8VSL7 STOM Erythrocyte band 7 integral membrane protein 1 RHT(0.901)RDS(0.099)EAQR;RHT(0.995)RDS(0.005)EAQR 113.65 3.5246999999999996e-05 15969500.0 534.47 514.63 373.3 284.65 574.3399999999999 479.24 392.471 327.02 441.98 489.92 700.1700000000001 True False 588.7290009439819 557.9996761941421 398.6343828352584 302.23218401294537 534.000339765436 475.33722833151575 407.4066986733717 320.49732955777273 423.405117626852 458.9863675897297 614.0535287433215 0.9587584361722226 0.9087150387949154 0.6491850696649775 0.4921919179122256 0.8696315789574295 0.7740973808982211 0.6634709835592695 0.5219371187617469 0.6895247691082615 0.7474696359600094 1.0 9.262220614566353 -10.646003714213757 0.9873765709981996 0.9951735724715348 0.7205778547176256 0.03707272954926022 0.15819994137836654 0.49523349194989735 0.8822516912373237 0.09130630028062864 0.026291729892368564 2.2594164469463684e-11 10.646003714213757 -0.27459571775390923 RHT(ph)VEDAVVSQGPEAAGPLSTPQEVSASR ddPTM_A549_MK2206_60min_R1 1 RHTVEDAVVSQGPEAAGPLSTPQEVSASR 29 1 Q96NW4 Q96NW4 ANKRD27 Ankyrin repeat domain-containing protein 27 1 RHT(0.999)VEDAVVS(0.001)QGPEAAGPLSTPQEVSASR 84.369 8.540700000000001e-07 2829700.0 1032.7 1052.1 876.84 882.89 1589.1 1032.2 706.98 869.6 1547.0 1145.4 1320.9 True False 1206.9945129090722 1105.6473961175634 1001.1890969442658 1099.1980896344376 1355.3454950680402 1141.4267188810934 835.4291147026531 992.8684630383087 1196.6069700513665 886.6533444851519 992.8840750145903 1.2156449511906369 1.1135714872869888 1.0083645433929973 1.1070759591126336 1.3650591536057457 1.1496072377475892 0.8414165719098442 0.9999842761338665 1.2051829615998046 0.8930079218685452 1.0 9.955481474331432 -7.5607188740563425 24.999308438069015 1.0697501146882373 1.1586419673442525 0.20379491307364694 0.12953746975373862 321.5410060882428 212426.84650419233 0.020770494935509295 0.03080764858285209 2.749673485906256e-08 7.5607188740563425 0.08889185265601518 RHT(ph)VEDAVVSQGPEAAGPLSTPQEVSASR ddPTM_A549_PD325901_60min_R1 1 RHTVEDAVVSQGPEAAGPLSTPQEVSASR 29 1 Q96NW4 Q96NW4 ANKRD27 Ankyrin repeat domain-containing protein 27 1 RHT(1)VEDAVVSQGPEAAGPLSTPQEVSASR 94.83200000000001 5.7539e-10 8887200.0 1358.0 1573.9 1595.8 1179.3 1381.7 1404.8 1286.5 1171.4 1944.7 2099.4 2163.2 True False 1495.8631602932387 1706.5380766025298 1704.1005843249552 1252.1426826153754 1284.6541586062306 1393.3597745599561 1335.4584614998128 1148.0355080544768 1862.9710218764174 1966.8435257141557 1897.1401136546165 0.7884832277420116 0.8995319134942994 0.8982470888996209 0.6600159227055035 0.6771530206756822 0.7344527505012863 0.703932435927049 0.6051400736253064 0.9819891575048844 1.0367413094888727 1.0 10.889610517871096 -8.822613206351027 10.841046554383754 0.9916663065668363 0.7491917132926872 0.6347280705395254 0.08775426245052106 0.25628736630189186 44.29565399055401 0.01620309572550531 0.017242008243271042 1.5044812986729702e-09 8.822613206351027 -0.2424745932741491 RHYNGEAYEDDEHHPR ddPTM_A549_PD325901_60min_R1 2 RHYNGEAYEDDEHHPR 16 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ; 45.723 0.005453 6748400.0 690.19 891.52 790.98 681.1700000000001 797.15 1064.69 752.21 801.0699999999999 941.23 975.53 1066.72 False True 760.2575807089762 966.6515191897121 844.6606593491365 723.2443238506871 741.1609340182077 1056.0195176368443 780.835763175106 785.092030422742 901.6733763154934 913.9348693150084 935.5202024952173 0.812657576694997 1.03327701166844 0.9028780534041484 0.7730932179996237 0.7922447126650873 1.1288046103336213 0.8346540898769077 0.8392037161022781 0.9638203150616655 0.9769269192448902 1.0 9.86962499847858 -8.92686294407889 6.286652844342886 0.9843030847021748 0.8938669348619126 0.13811428087219746 0.10137772185232508 0.3032006151770045 19.87025240200483 0.017467071467830338 0.018440925182333805 1.1834149623520917e-09 8.92686294407889 -0.09043614984026216 RIDFIPVS(ph)PAPS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 2 RIDFIPVS(0.999)PAPS(0.868)PT(0.133)R 50.883 0.0055821 3176400.0 206.54 136.64 224.88 186.67 184.16 230.54 259.35 185.89 336.1 299.76 113.81 True False 241.39890258181455 143.59439236337215 256.77136549521754 232.4041583799347 157.07030795527683 254.93558977993334 306.47053791922406 212.24047676424928 259.97388664141215 232.04400780763834 85.54783600379331 2.8218002214703666 1.6785274656977294 3.0014945729758957 2.7166573607967077 1.836052380662348 2.980035518006898 3.5824464093473356 2.4809566983650906 3.0389300160659185 2.7124474287970206 1.0 6.418659456018392 -6.735935654200631 24.8690220425366 2.218896989174722 2.523961346578558 0.0 0.7461560324114566 923.2919771081152 900309.1842855435 0.13798320187256155 0.2871493854755673 1.8368104681105196e-07 6.735935654200631 0.3050643574038361 RIDFIPVS(ph)PAPS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 2 RIDFIPVS(1)PAPS(0.837)PT(0.163)R 61.942 0.0012492 9379500.0 218.98 118.74 335.81 268.02 560.01 465.86 322.64 374.84 333.66 435.03 231.19 True False 241.21068839544418 128.7466365180662 358.6000859895745 284.5749866824157 520.6768295296196 462.06619061539095 334.91824175538227 367.36352214370845 319.6374305339052 407.56213155731564 202.75509563415807 1.1896652345086982 0.6349859475313542 1.768636614867702 1.4035404920026755 2.5680086012195953 2.2789374993027147 1.6518363728805774 1.8118583949503406 1.5764705174692342 2.010120289616306 1.0 7.663594362435528 -5.763388811933069 24.983220642994667 1.5256517464066344 0.9123255729240892 0.20425204150981857 0.4760800332597268 65.53391614159314 839918.7045116184 0.07564452390139231 0.25382167386933546 1.7242934881150227e-06 5.763388811933069 -0.6133261734825451 RIDFIPVS(ph)PAPSPT(ph)R ddPTM_A549_PD325901_60min_R1 2 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 2 RIDFIPVS(0.997)PAPS(0.125)PT(0.878)R;RIDFIPVS(0.93)PAPS(0.331)PT(0.739)R 81.656 0.00052294 12931000.0 4800.700000000001 4765.799999999999 4664.1 5285.4 5695.9 4778.4 5329.6 5723.3 5286.3 5725.6 5513.3 True False 5288.063529911448 5167.430691576555 4980.633873511732 5611.867153985673 5295.839633788254 4739.48629467347 5532.420844469025 5609.144291658007 5064.135194603439 5364.084638862989 4835.199051688237 1.0936599452022748 1.0687110574635634 1.030078352570142 1.1606279480937312 1.095268173486918 0.9802050016986689 1.1441971230816959 1.1600648146428518 1.0473478217686338 1.109382381474055 1.0 12.239359567326439 -9.221971701264463 2.2496432256949124 1.0162004428951446 1.0891410476438728 0.0 0.059406894125532586 0.26850903792048053 2.8067029138079387 0.010697376439252438 0.009906215243236037 5.998301600632865e-10 9.221971701264463 0.07294060474872821 RIDFIPVS(ph)PAPSPTR ddPTM_A549_MK2206_60min_R1 2 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RIDFIPVS(0.964)PAPS(0.028)PT(0.008)R;RIDFIPVS(0.998)PAPS(0.001)PT(0.001)R 71.742 0.00057941 8502200.0 424.66999999999996 491.75 584.74 289.155 891.52 451.49 343.76 436.25 728.9300000000001 668.05 595.26 True False 496.34391381533425 516.7779745659271 667.6649246694832 359.9979879806612 760.3785889894027 499.26637212519364 406.21674229848657 498.0897734595932 563.8285188620189 517.1370410191246 447.4405136597663 1.1092958698700988 1.1549646462253194 1.492187015450227 0.8045717296275134 1.6993959325900347 1.11582737119964 0.9078675933386169 1.113197750882122 1.260119505608189 1.155767136036223 1.0 8.805552081419448 -7.47693640400488 24.99826980216148 1.1061352577156554 1.2524095396952286 0.10846639703092176 0.22656023034676062 840.0275677269583 457078.430931246 0.032637300844496134 0.05217322799138151 3.334752416985017e-08 7.47693640400488 0.14627428197957326 RIDFIPVS(ph)PAPSPTR ddPTM_A549_PD325901_60min_R1 2 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RIDFIPVS(1)PAPSPTR;RIDFIPVS(1)PAPSPTR 102.98 2.6507999999999997e-06 12759000.0 1442.9499999999998 1645.4099999999999 1521.49 1436.9899999999998 1615.58 1693.43 1548.84 1772.2199999999998 1734.4099999999999 1712.8899999999999 1751.46 True False 1589.437221756353 1784.074475266897 1624.7474608626235 1525.749608658924 1502.1072342484292 1679.6392675349268 1607.7819537577682 1736.8716818203045 1661.5187792732438 1604.7378330763631 1536.0415234197096 1.03476188470333 1.1614754211168643 1.0577497001809082 0.9932997157929216 0.9779079610453941 1.093485587417926 1.046704746743006 1.13074526654298 1.0816887134497397 1.0447229509158802 1.0 10.5850015012563 -10.799568715880428 1.1132057892664455 1.0009567265826202 1.0652972955588547 0.06502874757635613 0.05264472114494237 0.7033811092280663 1.5830878608211711 0.033802189154897445 0.008982141024384924 1.5864678815410298e-11 10.799568715880428 0.06434056897623441 RIDFIPVSPAPS(ph)PTR ddPTM_A549_MK2206_60min_R1 4 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RIDFIPVS(0.001)PAPS(0.864)PT(0.135)R;RIDFIPVS(0.002)PAPS(0.793)PT(0.205)R;RIDFIPVS(0.02)PAPS(0.809)PT(0.17)R;RIDFIPVS(0.325)PAPS(0.499)PT(0.176)R 108.45 1.547e-06 34924400.0 1918.9 2162.54 1926.94 1819.95 3045.4700000000003 2304.2200000000003 2026.24 2070.51 3580.8 2925.0000000000005 3265.9800000000005 True False 2242.7634073992635 2272.6040490448404 2200.2090671796245 2265.837831700659 2597.485397309714 2548.051030982553 2394.381579924614 2364.01113317094 2769.754517362594 2264.2404684992753 2454.947029537552 0.9135689611281517 0.9257242709114337 0.8962348436471504 0.9229681147651824 1.0580616877094136 1.0379250551334867 0.97532922344791 0.9629581024468206 1.128233922784209 0.9223174436174286 1.0 11.261476180465623 -6.741463413090291 7.813323193239757 1.0459335147497946 0.9136751660646305 0.30576195329301714 0.05781800882141789 0.1065303636513076 29.58094778337603 0.008373659456736545 0.017136120722554028 1.813579453480488e-07 6.741463413090291 -0.13225834868516406 RIDFIPVSPAPS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RIDFIPVSPAPS(0.895)PT(0.105)R;RIDFIPVSPAPS(0.988)PT(0.012)R;RIDFIPVSPAPS(0.995)PT(0.005)R;RIDFIPVSPAPS(0.993)PT(0.007)R 169.06 1.5942999999999998e-27 72579900.0 5366.08 5331.3 5648.23 5423.57 6498.03 5894.900000000001 6121.21 6944.83 5805.280000000001 6817.42 7252.86 True False 5910.840491300691 5780.587361198977 6031.552853366169 5758.571601078834 6041.630789786529 5846.893888847868 6354.15599620464 6806.309917536262 5561.304270005004 6386.966937731827 6360.80419966763 0.9292599340834212 0.9087824714838777 0.9482374655835711 0.9053213116322202 0.9498218464423447 0.9192067080375441 0.9989548171497973 1.0700392126347658 0.8743083571564108 1.0041131179710836 1.0 12.634993462361342 RIDFT(ph)PVSPAPS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 RIDFT(0.639)PVS(0.361)PAPS(0.492)PT(0.508)R 99.12700000000001 1.6672e-05 17574000.0 3482.2 3531.6 3688.9 4122.6 5345.2 3748.1 3929.2 3797.9 5852.0 4497.4 5263.5 True False 3835.7103805398497 3829.22032615128 3939.2509371577416 4377.24363889608 4969.771591938936 3717.5767162785924 4078.7278561407397 3722.147905105087 5606.060790878182 4213.433396468914 4616.122868075573 0.8309376700232697 0.829531716461363 0.8533678694735406 0.9482511111583387 1.0766116357753701 0.8053461362540426 0.8835830355272001 0.8063364021020573 1.2144522472850265 0.912764568206882 1.0 12.172465909599598 -8.755610166297235 24.999722399955836 1.1012691185940071 0.8832862696439748 0.28601773722569035 0.10388634995345504 89.29156691530845 382944.1286181179 0.01796314358387541 0.02010243205289002 1.7554555360950915e-09 8.755610166297235 -0.21798284895003228 RIDFT(ph)PVSPAPSPT(ph)R ddPTM_A549_PD325901_60min_R1 1 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 RIDFT(0.765)PVS(0.235)PAPS(0.285)PT(0.715)R 107.03 2.6031e-06 23037000.0 4025.1 3652.0 2660.4 4577.1 4871.4 3368.3 3545.6 4026.7 5856.5 4811.9 4284.3 True False 4433.725188877988 3959.7668566951143 2840.950742284816 4859.817071651686 4529.249669417671 3340.8696815563067 3680.5297482267647 3946.3843096149576 5610.371671527351 4508.075812796006 3757.3582604153457 1.180011295592525 1.0538699219641072 0.7561032367381363 1.2934132799767868 1.2054346047153348 0.8891538815324468 0.9795525188540077 1.0503082315016499 1.493169211633061 1.1997993005590248 1.0 11.875502966753752 -8.589612508457337 24.999993909317723 1.2349306733518317 1.0464385099275244 0.17141233509414278 0.17601491585598833 82.43192884053074 30879.957823193996 0.037127682460691876 0.04209883720952377 2.5726901962036097e-09 8.589612508457337 -0.1884921634243073 RIDFTPVS(ph)PAPS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 RIDFT(0.12)PVS(0.88)PAPS(0.832)PT(0.169)R;RIDFT(0.159)PVS(0.842)PAPS(0.828)PT(0.171)R 60.621 0.0013712 36682000.0 1122.48 1116.68 1276.19 1046.49 1395.51 1299.01 998.1000000000001 1301.08 1997.33 1885.65 1646.8 True False 1311.9271819988148 1173.5142422740819 1457.1729319252117 1302.8800969787208 1190.232327620919 1436.470375986949 1179.4418503843356 1485.5120743903885 1544.9379440806044 1459.680355359198 1237.8541106321659 1.059839904178062 0.9480230603869579 1.1771766312437584 1.0525312197843302 0.9615287596476724 1.1604520788425954 0.9528116764761564 1.2000703973360358 1.2480775648849383 1.1792022523669987 1.0 10.273625577994652 -8.271088528134584 24.89346212978344 1.126640180772265 1.0475692960994099 0.2298965682772115 0.09290599186497336 1164.0518660488385 3003084.700801174 0.018389265604374126 0.02237526872085101 5.356874499446369e-09 8.271088528134584 -0.07907088467285517 RIDFTPVS(ph)PAPS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 RIDFT(0.169)PVS(0.83)PAPS(0.834)PT(0.167)R 55.208999999999996 0.0035941000000000002 28781000.0 1092.1 1165.2 958.21 1283.4 1547.3 1304.4 841.15 1537.3 1452.7 1166.7 1085.7 True False 1202.969188038472 1263.3954932697554 1023.2398927848197 1362.6727031871212 1438.622985895217 1293.7773988724416 873.160423544942 1506.637345511481 1391.6480709003304 1093.0343628897326 952.1657828193495 1.26340308562286 1.326865043951547 1.0746446797899214 1.4311296706675034 1.5108954888459387 1.358773253793667 0.9170256265243288 1.582326704757599 1.4615606819851057 1.1479454340958075 1.0 9.895068974682607 -10.922626163968184 1.1966566433059858 1.0012476062059261 1.3345768367992794 0.19947057630647336 0.1866975247765623 0.4664648267476105 1.1940276228118996 0.12632748134578406 0.030316121075531333 1.1950163190925522e-11 10.922626163968184 0.3333292305933533 RIDFTPVS(ph)PAPSPT(ph)R ddPTM_A549_MK2206_60min_R1 1 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 RIDFT(0.455)PVS(0.545)PAPS(0.209)PT(0.791)R 84.035 0.00031099999999999997 12031000.0 2185.9 2722.8 2877.4 2296.5 3220.1 2228.8 2683.4 2049.5 4450.6 3203.1 3397.6 True False 2554.8264798759988 2861.378889980897 3285.4585871395343 2859.1426030938032 2746.427555640676 2464.6501366422967 3170.9390455077896 2340.0229013305134 3442.5462061477792 2479.5174853504363 2553.8821510103535 1.0003697621150105 1.1204036524742902 1.2864566150163814 1.119528010312725 1.075393222257397 0.9650602458955456 1.2416152578744948 0.9162611126769361 1.3479659602875007 0.9708817160453166 1.0 11.318476238020786 -8.761197023420308 24.99999999230213 1.1643172414074183 1.0994573770747558 0.0 0.14018961702055233 20.4187683441335 2106251.606608432 0.02653131720094912 0.029163129842120456 1.7330176130910633e-09 8.761197023420308 -0.06485986433266255 RIDFTPVS(ph)PAPSPTR ddPTM_A549_MK2206_60min_R1 4 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RIDFT(0.001)PVS(0.999)PAPSPTR;RIDFT(0.211)PVS(0.789)PAPSPTR;RIDFTPVS(1)PAPSPTR;RIDFT(0.001)PVS(0.995)PAPS(0.002)PT(0.002)R 120.4 2.4648e-07 18285000.0 1804.54 1855.5700000000002 2010.6100000000001 2262.67 2753.66 1917.9899999999998 1855.76 2046.25 3251.83 2811.12 3480.5699999999997 True False 2109.102235232826 1950.01058721972 2295.744731315987 2817.024251575116 2348.6002617513445 2120.950428741279 2192.927570653477 2336.3122038778056 2515.2956971054514 2176.086039592368 2616.248410154845 0.8061551904041089 0.7453461145550422 0.8774949360332766 1.0767418875978938 0.8976977310852301 0.8106838863270438 0.8381954718602912 0.8930009072569409 0.9614131774882116 0.831758188995354 1.0 11.353283814444584 -2.000000000948454 0.0878306909152788 1.0937582170302251 0.31310470979329963 0.0 0.09379864717004154 120.10358812366357 0.7383983737509997 0.8674313519602694 11.333896299455875 0.009999999978161036 2.000000000948454 -0.7806535072369255 RIDFTPVS(ph)PAPSPTR ddPTM_A549_PD325901_60min_R1 2 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RIDFT(0.002)PVS(0.998)PAPSPTR;RIDFT(0.086)PVS(0.914)PAPSPTR 125.23 7.024499999999999e-08 32534000.0 1531.8600000000001 2126.6 1929.92 2079.31 2189.6000000000004 1729.4499999999998 1891.25 2042.6799999999998 2323.9 2431.6 2097.45 True False 1687.3732995042706 2305.816045303348 2060.895976751734 2207.7442562443616 2035.8100497099267 1715.36593259732 1963.22255368171 2001.9371449485388 2226.2345645799387 2278.0683610205474 1839.476946831025 0.9173114685732853 1.253517229055636 1.1203706468309704 1.2002021879359632 1.1067331141154753 0.9325291820332304 1.0672721705286217 1.088318692113752 1.210254125997721 1.2384326778028447 1.0 10.845079880570168 -11.168896511464771 1.5820955919565112 1.0002324075954894 1.1177533327052065 0.0 0.12285842087358491 0.6087343818558276 2.744155214758883 0.07345499700961315 0.01568205685566291 6.7780300283125804e-12 11.168896511464771 0.11752092510971712 RIDFTPVSPAPS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RIDFTPVSPAPS(0.806)PT(0.193)R;RIDFTPVSPAPS(0.988)PT(0.012)R 148.7 3.3594e-14 25157000.0 2211.63 2016.73 2252.1 1968.42 3030.3999999999996 2375.1000000000004 2200.7 2127.0699999999997 3302.5 3698.1 3350.3999999999996 True False 2584.899074837893 2119.372942849705 2571.4816445739025 2450.6829883657315 2584.6321743466065 2626.43150553622 2600.5387036777943 2428.5886863786736 2554.4890230088163 2862.6966415580055 2518.4032136640803 1.0264039772555191 0.8415542560264536 1.0210762242606088 0.9731098559075371 1.0262979972083852 1.042895550357469 1.032614114200646 0.964336716694888 1.0143288450193144 1.1367110024422995 1.0 11.29829357160419 -5.86317306454237 21.071752965068143 1.0079715240817817 0.9331884288001148 0.2180945763657962 0.059711591793478284 2.7558918879308214 561.2560883102096 0.0053788546684010565 0.01672364155215722 1.3703355843230505e-06 5.86317306454237 -0.07478309528166693 RIDFTPVSPAPS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RIDFTPVS(0.006)PAPS(0.956)PT(0.038)R;RIDFTPVS(0.011)PAPS(0.906)PT(0.083)R;RIDFTPVSPAPS(0.972)PT(0.028)R;RIDFTPVS(0.04)PAPS(0.845)PT(0.115)R 141.74 7.7775e-14 42438700.0 3111.2799999999997 4202.64 3602.71 3909.7700000000004 4079.4900000000002 3760.62 4084.81 3711.25 4474.96 4316.549999999999 4639.72 True False 3427.1348551967203 4556.811221966365 3847.211565455169 4151.267613168081 3792.9606958764803 3729.9947575495867 4240.259679843803 3637.2262073306974 4286.892993292586 4044.0022963329657 4069.063853608356 0.8422416011382109 1.1198672190718968 0.945478297678604 1.0202021306416287 0.9321457790624166 0.916671473278039 1.042072533731225 0.8938729737812507 1.0535329863381386 0.9938409525686931 1.0 11.990481204680815 -8.80949989351342 24.999858700569035 1.02527946213783 0.9704692674794426 0.08074643433636752 0.07363463104880327 182.34375379707453 94849.71985703005 0.01161767236060805 0.01236796969921598 1.5506011669929388e-09 8.80949989351342 -0.054810194658387434 RIDIS(ph)PSTFR ddPTM_A549_MK2206_60min_R1 8 RIDISPSTFR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.891)PS(0.095)T(0.014)FR;RIDIS(0.989)PS(0.011)TFR;RIDIS(0.98)PS(0.02)TFR;RIDIS(0.998)PS(0.001)T(0.001)FR;RIDIS(0.987)PS(0.013)TFR;RIDIS(0.999)PS(0.001)TFR;RIDIS(0.994)PS(0.006)TFR;RIDIS(0.998)PS(0.002)TFR 180.47 3.1835e-12 1841804000.0 21128.0 23093.5 20047.500000000004 20673.3 29744.5 23235.600000000002 22691.5 22986.1 34050.2 30915.000000000004 32626.399999999998 True False 24693.889869994102 24268.860509686303 22890.536951998263 25738.25942805971 25369.123452300893 25694.375769456998 26814.25182646644 26244.45006697892 26337.88406699616 23931.28002860003 24524.36443716864 1.0069125311385658 0.9895816289903481 0.9333794158312956 1.049497510689872 1.0344457046907993 1.0477081204402228 1.0933719361072327 1.0701378269849617 1.073947670875376 0.9758165227854084 1.0 14.581928128217157 -6.285267925894155 24.73824105308718 1.0439679482621698 0.9779202334236544 0.4129400202015622 0.03528824561407768 492.55850213511536 511361.94493202027 0.005129930004676668 0.011927370626000886 5.184800783887194e-07 6.285267925894155 -0.06604771483851535 RIDIS(ph)PSTFR ddPTM_A549_PD325901_60min_R1 10 RIDISPSTFR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.999)PS(0.001)TFR;RIDIS(0.715)PS(0.285)TFR;RIDIS(1)PSTFR;RIDIS(0.998)PS(0.002)TFR;RIDIS(0.892)PS(0.091)T(0.017)FR;RIDIS(0.976)PS(0.018)T(0.005)FR;RIDIS(0.943)PS(0.029)T(0.029)FR;RIDIS(1)PSTFR;RIDIS(0.975)PS(0.011)T(0.014)FR;RIDIS(0.983)PS(0.015)T(0.002)FR 172.6 1.2112000000000002e-10 2886204700.0 32684.739999999998 32740.070000000007 33675.24 35083.61 38987.21 38848.3 35831.50999999999 40447.93 39545.92999999999 38193.77 40221.26999999999 True False 36002.870743566134 35499.190600185684 35960.64429206862 37250.6449090406 36248.88286817285 38531.93232491281 37195.0977208046 39641.16430536276 37883.95208677601 35782.20884401042 35274.30877363766 1.0206541813364451 1.0063752298589643 1.019457093343354 1.0560276360930412 1.0276284391790418 1.0923511661753593 1.054452915278738 1.1237970546708114 1.0739814160465895 1.0143985832190803 1.0 15.106330191964739 -6.167064239600848 4.914899652010129 1.048067975055267 1.0135208529985453 0.19688283370776294 0.03363926246542612 0.3857681676618946 15.244160974464085 0.005654805334514307 0.015475369337544408 6.806686686793122e-07 6.167064239600848 -0.034547122056721724 RIDIS(ph)PSTFRK ddPTM_A549_MK2206_60min_R1 3 RIDISPSTFRK 11 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.562)PS(0.219)T(0.219)FRK;RIDIS(0.999)PSTFRK;RIDIS(0.895)PS(0.048)T(0.057)FRK 59.185 0.0032681999999999993 205890000.0 5238.9800000000005 6763.799999999999 7131.299999999999 6454.589999999999 10236.800000000001 6829.8 6961.099999999999 5070.110000000001 11756.9 11066.099999999999 10296.9 True False 6123.191743236541 7108.048529474364 8142.625572554449 8035.964839757556 8730.980280606966 7552.524902745682 8225.841764062112 5788.813619060668 9093.980921911387 8566.260324259767 7739.895550017214 0.7911207203852928 0.9183649163661588 1.0520330048299344 1.0382523624288034 1.1280488508126634 0.9757915793487529 1.0627845958520483 0.747918829350067 1.1749487913814498 1.106766915509695 1.0 12.918098381976352 -5.489115665126708 2.1327328752843537 1.0525883112432532 0.7741310787018089 0.3043508505114273 0.10697092207502429 0.3792663330191633 2.646784841543048 0.015744259306742836 0.16710918775358868 3.242532478712411e-06 5.489115665126708 -0.2784572325414444 RIDIS(ph)PSTFRK ddPTM_A549_PD325901_60min_R1 3 RIDISPSTFRK 11 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.998)PS(0.001)T(0.001)FRK;RIDIS(0.732)PS(0.238)T(0.03)FRK;RIDIS(0.998)PS(0.001)T(0.001)FRK 93.348 9.5448e-05 353840000.0 14502.7 14236.4 14001.0 15835.3 16239.2 20629.300000000003 16021.800000000001 19171.9 19623.199999999997 14472.9 17714.0 True False 15975.003427676535 15436.151390650153 14951.192054852545 16813.41051642436 15098.614614198677 20461.301820422625 16631.51836646536 18789.501414435395 18798.505145516192 13559.078624039432 15535.290298297847 1.0283041462975986 0.9936184708657452 0.9624018455896315 1.0822720524422098 0.9718913727574814 1.3170852573424074 1.0705637324516313 1.2094721793833554 1.2100517457067337 0.8727920987434047 1.0 13.923261580005123 RIDIS(ph)PSTLR ddPTM_A549_MK2206_60min_R1 7 RIDISPSTLR 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.974)PS(0.024)T(0.002)LR;RIDIS(0.999)PS(0.001)TLR;RIDIS(0.998)PS(0.001)TLR;RIDIS(0.996)PS(0.004)TLR;RIDIS(0.981)PS(0.015)T(0.004)LR;RIDIS(0.979)PS(0.01)T(0.01)LR;RIDIS(0.673)PS(0.265)T(0.063)LR 182.93 4.5337e-14 1943739200.0 11581.900000000001 12277.35 12535.09 10297.86 15696.81 12292.050000000001 11272.410000000002 12100.240000000002 18215.5 17106.7 18289.58 True False 13536.641569731384 12902.214674198249 14312.754250735705 12820.836162288497 13387.830042438472 13592.786572197585 13320.460984561563 13815.486075430856 14089.718334176257 13242.284588880864 13747.772519271222 0.9846425339636744 0.9384949202579767 1.0410962380031026 0.9325755240942943 0.9738181238940204 0.9887264684619721 0.9689177621967001 1.0049254201773208 1.0248728158998635 0.96323128494585 1.0 13.74691026467936 -8.351935663022237 4.7645649262037395 1.011853204119356 0.9753913308524617 0.055315760180035256 0.030908751444509015 0.21127507597387296 8.20270489478622 0.004236520705606801 0.00514968489958867 4.446971406315541e-09 8.351935663022237 -0.03646187326689432 RIDIS(ph)PSTLR ddPTM_A549_PD325901_60min_R1 9 RIDISPSTLR 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.955)PS(0.044)TLR;RIDIS(0.999)PS(0.001)TLR;RIDIS(0.99)PS(0.01)TLR;RIDIS(1)PSTLR;RIDIS(0.995)PS(0.003)T(0.003)LR;RIDIS(1)PSTLR;RIDIS(0.992)PS(0.008)TLR;RIDIS(0.974)PS(0.011)T(0.015)LR;RIDIS(0.996)PS(0.003)T(0.001)LR 186.36 3.1689e-14 3197435000.0 16846.0 19128.75 18706.69 17076.84 21788.929999999997 19820.140000000003 18273.1 19850.42 20882.050000000003 21064.5 22443.850000000002 True False 18556.193518630254 20740.796894853975 19976.238475865266 18131.637622482445 20258.550724527806 19658.731351186485 18968.492819924006 19454.48780074677 20004.450057784976 19734.483875109927 19683.398733287348 0.9427332022314402 1.0537203038913407 1.014877498878417 0.9211639650330987 1.0292201564899357 0.9987467925415164 0.9636797525137599 0.9883703553617772 1.0163107666947113 1.0025953415116358 1.0 14.264691731949418 -8.747618592480618 24.543457631895595 1.007702306623413 0.9906314825679795 0.04220345951746629 0.03584564766625628 488.4972190067669 867492.7163999825 0.005783748568907938 0.00654221936780103 1.7880571989484606e-09 8.747618592480618 -0.017070824055433476 RIDIS(ph)PSTLRK ddPTM_A549_MK2206_60min_R1 3 RIDISPSTLRK 11 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.418)PS(0.249)T(0.334)LRK;RIDIS(0.981)PS(0.01)T(0.01)LRK;RIDIS(0.993)PS(0.003)T(0.003)LRK 58.486999999999995 0.0023159 654260000.0 6585.4 7639.5 7457.3 6935.2 11021.400000000001 7883.3 6743.2 6453.4 12899.9 11507.3 12088.699999999999 True False 7696.854522428017 8028.3179190572455 8514.857274579703 8634.324311332957 9400.166659960296 8717.50557348897 7968.352154605406 7368.189212708624 9978.093246907323 8907.79293783306 9086.742158852965 0.8470422498925185 0.8835199435295382 0.9370638151412616 0.9502112154597422 1.034492505193621 0.9593653502092323 0.876920684586836 0.8108724869594762 1.098093582108076 0.9803065589524227 1.0 13.14954742685737 -8.777477114888285 24.99996999776561 1.0463219709096603 0.9180012619949346 0.3713648251196118 0.06414082383638964 168.32793698052532 262392.29489981337 0.012072001956258373 0.01287122568944457 1.6692557661877376e-09 8.777477114888285 -0.1283207089147257 RIDIS(ph)PSTLRK ddPTM_A549_PD325901_60min_R1 8 RIDISPSTLRK 11 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.731)PS(0.194)T(0.075)LRK;RIDIS(0.999)PS(0.001)TLRK;RIDIS(0.943)PS(0.028)T(0.028)LRK;RIDIS(0.99)PS(0.004)T(0.005)LRK;RIDIS(0.998)PS(0.001)TLRK;RIDIS(0.666)PS(0.263)T(0.071)LRK;RIDIS(0.771)PS(0.095)T(0.134)LRK;RIDIS(0.989)PS(0.01)T(0.001)LRK 73.38600000000001 0.00049315 1342240000.0 16144.68 17352.25 16925.870000000003 18026.87 19306.36 23429.08 20789.799999999996 21576.57 20937.96 18797.73 22622.36 True False 17783.676028514757 18814.585005226676 18074.56132172467 19140.34881790776 17950.347876926255 23238.281340366728 21580.967215615085 21146.20838485829 20058.010354917256 17610.838119759333 19839.95313495547 0.8963567558626025 0.9483180165419732 0.911018347612908 0.9647376023376236 0.9047575745176548 1.1712871085075214 1.0877529331252385 1.0658396338447678 1.0109908132584042 0.8876451471415665 1.0 14.276120997408956 RIDISPS(ph)TFRK ddPTM_A549_PD325901_60min_R1 1 RIDISPSTFRK 11 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.381)PS(0.392)T(0.226)FRK 84.29700000000001 0.00010908 143920000.0 3517.3 4177.1 3930.3 4426.0 4594.2 5939.3 4947.8 5423.0 4963.5 5064.0 4957.9 True False 3874.3737067005923 4529.118876533725 4197.033792813869 4699.383967824683 4271.519241129586 5890.932309968636 5136.091236540045 5314.8340107387985 4754.9013560362 4744.258175772355 4348.10973071756 0.8910478223053521 1.0416293877170146 0.9652548009917038 1.0807878040946206 0.9823853365413263 1.3548260450631424 1.1812239236410547 1.2223320798901969 1.0935559704128048 1.0911081986400144 1.0 12.086172633942782 RIDS(ph)FVK ddPTM_A549_MK2206_60min_R1 2 RIDSFVK 7 1 Q96CC6 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 RIDS(1)FVK;RIDS(1)FVK 91.265 0.0051967 17982000.0 2483.7400000000002 2605.05 2029.4900000000002 2011.81 3089.18 2636.6400000000003 2589.84 2557.7400000000002 3100.7 2895.5 2547.6800000000003 True False 2902.934590387122 2737.6359179318133 2317.302199212418 2504.7035403135833 2634.7657142120006 2915.647494740018 3060.3804045680486 2920.307477750234 2398.3964008004355 2241.404538987913 1915.0207436090334 1.5158763162618667 1.4295594066372805 1.210066369748689 1.307925017873821 1.3758418664680057 1.5225148367036543 1.5980925610238974 1.5249482218383936 1.2524127526057165 1.1704335561210575 1.0 10.903144304248245 -9.50433903654913 1.064341385055881 1.0524290988608964 1.4252375446863204 0.5457767282619979 0.11879302373839984 0.21507035033036612 0.5084718930097315 0.03558685219106217 0.026135623867119224 3.1308406464148936e-10 9.50433903654913 0.37280844582542394 RIDS(ph)FVK ddPTM_A549_PD325901_60min_R1 2 RIDSFVK 7 1 Q96CC6 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 RIDS(1)FVK;RIDS(1)FVK 90.15 0.0052559 15428700.0 2744.3999999999996 2549.1 3100.3999999999996 2874.5 3049.3999999999996 2411.7 2945.5 3224.6 4071.6 5682.0 5555.3 True False 3023.0094676795 2763.921603067228 3310.8117882197575 3052.051336536842 2835.2206638588978 2392.0599147965872 3057.592614339447 3160.2828233502373 3900.484811370403 5323.237550303813 4872.033317948173 0.6204821006750878 0.5673035101966906 0.6795544225904607 0.6264430346347045 0.5819378643028109 0.49097774146667544 0.6275803991478313 0.6486578841133974 0.8005866456211076 1.0926110728129548 1.0 12.250308283972474 -9.217930825029145 0.7755778499371659 0.964869954946427 0.5916574501144759 0.8664660206497174 0.06512811842624448 0.1273663605574036 0.16515422082748618 0.01781576253597641 0.013895037304049836 6.0543730188849e-10 9.217930825029145 -0.3732125048319511 RIDS(ph)FVKR ddPTM_A549_MK2206_60min_R1 1 RIDSFVKR 8 2 Q96CC6 Q96CC6 RHBDF1 Inactive rhomboid protein 1 1 RIDS(1)FVKR 44.638999999999996 0.018876 9232300.0 3466.9 3819.3 4442.2 3750.1 4453.9 3405.3 3332.6 3440.4 5583.6 5206.2 4684.8 True False 4052.027962432908 4013.686056450726 5072.17075686079 4668.874668348389 3798.737210045651 3765.6465857448015 3938.090282126877 3928.087235783114 4318.9235151769935 4030.115804137066 3521.434866097629 1.1506752549773185 1.1397871064128464 1.4403704596932245 1.325844391812456 1.0787469751656438 1.0693500601127979 1.1183197849378301 1.115479168335755 1.2264669600330058 1.1444527465030598 1.0 11.781947682957426 -14.999998977857791 0.22262899041344975 1.0928727271275265e-10 1.2187991309039305 0.09865296021733105 0.11276439162573078 45.33096210509844 0.5601994437276808 19.966228987582703 0.07610252344119343 1.0000023535721833e-15 14.999998977857791 1.2187991307946433 RIDT(ph)PSLEEPSDLEELEQFAK ddPTM_A549_PD325901_60min_R1 1 RIDTPSLEEPSDLEELEQFAK 21 1 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 RIDT(0.751)PS(0.249)LEEPSDLEELEQFAK 192.01 3.1780999999999994e-45 23857000.0 3007.4 3400.1 3843.0 3796.9 4473.0 2707.6 3230.9 3568.6 3559.1 3441.9 3392.9 True False 3312.7090340691357 3686.6383596519863 4103.80908983632 4031.425889614449 4158.831911012285 2685.5502033019197 3353.8536675163186 3497.4214734874568 3409.5234041036474 3224.577846601671 2975.5948093651755 1.1132930544316555 1.2389584590109255 1.3791558840337679 1.3548302601302522 1.3976472528864055 0.9025255034219074 1.127120418734647 1.1753688581791852 1.145829194678239 1.0836750475746442 1.0 11.538962370812916 -7.249539793525635 24.987528176376838 1.0738012299124768 1.301366630184911 0.5534448937099387 0.10030517425344987 475.3488949267018 998168.4075287383 0.01592019444579727 0.0274329729798004 5.629375342025278e-08 7.249539793525635 0.2275654002724341 RIEHLGS(ph)TK ddPTM_A549_PD325901_60min_R1 1 RIEHLGSTK 9 1 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4 F8VV64 TNS2 Tensin-2 1 RIEHLGS(0.962)T(0.038)K 71.176 0.0013477 4917700.0 3242.6 3025.2 3133.4 2946.7 4255.0 3332.2 3386.0 3392.1 3467.3 4049.7 4122.8 True False 3571.786364924043 3280.144220940324 3346.051366664878 3128.7109665587423 3956.143478953111 3305.0636679873874 3514.8560828902955 3324.4419044490296 3321.5814388605463 3794.001250873873 3615.721736582494 0.9878487962129581 0.9071893414122761 0.9254172777763305 0.8653074529778212 1.0941504261587276 0.914081311774635 0.9721035906409284 0.9194407497716414 0.9186496309309568 1.0493067573446304 1.0 11.820067937885396 -8.352704315914092 0.005733208986187143 1.9023658701582635 2.726930536129258e-07 0.08511833201469643 0.0624592819976268 7079.792386567744 30.433044107564097 5030.66940470806 5065.498862570961 4.439107722891581e-09 8.352704315914092 -1.9023655974652098 RIES(ph)PLK ddPTM_A549_PD325901_60min_R1 1 RIESPLK 7 1 P78406;E9PQ57;E9PPG9 P78406 RAE1 mRNA export factor 1 RIES(1)PLK 80.755 0.006576899999999999 6022000.0 1581.4 1626.8 1703.9 1484.6 2217.9 1648.8 1965.2 1599.4 1958.4 1904.6 1743.2 True False 1741.9425638348512 1763.896145255097 1819.5369003830617 1576.3003702287683 2062.122355339626 1635.3727194578978 2039.9867613987024 1567.4987122949722 1876.0952585194516 1784.3432309589296 1528.7974510552544 1.1394201126071168 1.1537801453276662 1.1901752577668965 1.0310720816159948 1.3488525598444998 1.0697118302552635 1.3343734711165294 1.0253148389363183 1.227170582489181 1.1671547658110526 1.0 10.578181562704819 -10.908483842167724 1.0245137587806115 0.9944332771318244 1.1728379602673515 0.0 0.11284105896805971 0.5477457724732319 0.9664041021712854 0.0744016279835002 0.01554186604385344 1.2345712462724768e-11 10.908483842167724 0.17840468313552715 RIES(ph)PLKHQHR ddPTM_A549_MK2206_60min_R1 1 RIESPLKHQHR 11 2 P78406;E9PQ57 P78406 RAE1 mRNA export factor 1 RIES(1)PLKHQHR 58.486999999999995 0.0028856 4797100.0 308.73 414.24 283.91 266.68 387.28 350.5 179.26 334.38 474.23 351.79 536.81 True False 360.83607627618665 435.32304663790467 324.1727071226751 332.0166119717203 330.3116250267138 387.58967735693 211.8292216209759 381.7793889958022 366.81766218969597 272.320394671234 403.50526179770054 0.8942537072963714 1.0788534570737671 0.8033915237645668 0.8228309353204384 0.8186054961343162 0.9605566867458846 0.52497263772282 0.9461571511977191 0.909077766558598 0.6748868489545577 1.0 8.656443676462299 -9.47458735785834 1.0694621929512353 0.9797945475510724 0.8556434567193799 0.0 0.1592428873109819 0.6354245510820318 1.5183528664406185 0.034716969230413196 0.025937226268961357 3.3528385568761204e-10 9.47458735785834 -0.12415109083169251 RIES(ph)PLKHQHR ddPTM_A549_PD325901_60min_R1 1 RIESPLKHQHR 11 2 P78406;E9PQ57 P78406 RAE1 mRNA export factor 1 RIES(1)PLKHQHR 67.115 0.0012267 5432800.0 535.58 336.67 467.64 432.65 444.75 605.16 243.36 477.87 357.72 560.54 529.85 True False 589.9516873268426 365.04236244346777 499.3768625477641 459.3738078805582 413.5122943042059 600.2317776001582 252.6211979717018 468.33850796823737 342.686272404809 525.1474087376452 464.6818089958851 1.2695820578852632 0.7855748931344553 1.0746641096772227 0.9885771273749735 0.8898826816520973 1.2917049171715553 0.5436433987325268 1.0078692535441702 0.7374643589885904 1.1301225883415107 1.0 8.860099358218994 -7.749335618288185 24.99999210390182 0.8621991947579515 1.0290297365407544 0.1383028351419061 0.19960035957121322 315.2889784597875 651218.9882379416 0.027306816148157644 0.040333673970202454 1.781001895638046e-08 7.749335618288185 0.16683054178280288 RIGS(ph)MTGAEQALLPR ddPTM_A549_PD325901_60min_R1 4 RIGSMTGAEQALLPR 15 1 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 RIGS(0.866)MT(0.134)GAEQALLPR;RIGS(0.973)MT(0.027)GAEQALLPR;RIGS(0.992)MT(0.008)GAEQALLPR;RIGS(0.997)MT(0.003)GAEQALLPR 135.28 5.8487e-10 18936600.0 2685.96 2782.6699999999996 2468.9 2715.11 2844.9100000000003 2940.7299999999996 3207.2799999999997 3592.1899999999996 3436.31 3704.47 3916.13 True False 2958.6366819007567 3017.1753666812147 2636.4544007017685 2882.8161782377942 2645.093336006697 2916.781669875923 3329.334795490959 3520.5409524314605 3291.8938407899204 3470.569131991194 3434.4708363934233 0.8614534298994527 0.8784978852374198 0.7676450103359559 0.8393771021986817 0.7701603717166338 0.8492666873068774 0.9693879942760356 1.0250606629487122 0.9584864736387675 1.0105105844007334 1.0 11.745872118634187 -7.739789528625435 4.051486227440755 0.9838323691919307 0.8231866256142408 0.8410557586172592 0.035776273816640454 0.0636403742242822 2.314639574480572 0.005529689634965476 0.008108862369924606 1.8205829507779694e-08 7.739789528625435 -0.1606457435776899 RIGS(ph)VTSR ddPTM_A549_MK2206_60min_R1 2 RIGSVTSR 8 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 RIGS(0.996)VT(0.002)S(0.001)R;RIGS(0.995)VT(0.004)S(0.001)R 54.784 0.009298299999999999 12632900.0 626.26 958.3000000000001 627.27 690.02 1085.1 587.46 740.37 672.6600000000001 1017.5699999999999 1165.8 950.98 True False 731.9573774130303 1007.0733767697575 716.2263181883004 859.0749309761744 925.4832274232785 649.6246272756122 874.8856454954924 768.0116149348534 787.0920197253836 902.4449703167369 714.8254202872096 1.023966631067677 1.4088382256539305 1.0019597762773014 1.2017968396129601 1.294698259403574 0.9087878086576714 1.2239151276181146 1.0744044533646748 1.101096851604883 1.2624690514701389 1.0 9.481447129512551 -10.21175508017433 0.1589474797754709 0.8862424420459343 1.2278011914201363 0.0 0.15398811965624604 11.708352110673289 0.6511090732735753 1.0105356561503631 0.36731675754147375 6.141082330922268e-11 10.21175508017433 0.34155874937420205 RIGS(ph)VTSR ddPTM_A549_PD325901_60min_R1 2 RIGSVTSR 8 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 RIGS(0.998)VT(0.002)SR;RIGS(0.999)VT(0.001)SR 94.363 0.0010611 30939000.0 2381.48 2565.53 2795.1099999999997 2634.42 3034.1800000000003 2469.8500000000004 2559.23 2416.91 2346.24 2952.6000000000004 3301.91 True False 2623.246096447085 2781.7362168283175 2984.8029729618534 2797.142140198082 2821.0696641527484 2449.7363604761576 2656.6228981143913 2368.702834020784 2247.635692069382 2766.1723321061304 2895.796002532044 0.9058808335094582 0.9606119403424848 1.0307366162367733 0.9659320400167345 0.9741948886199319 0.8459630299697016 0.9174067841075397 0.8179798687302637 0.7761719714040908 0.9552372921598854 1.0 11.499744258457001 -7.245456990513001 23.243570520498103 0.8843860671543827 0.9705194368393745 0.2889396429695241 0.06396747879605764 442.3494482320131 643317.8851075057 0.012868920718367182 0.02223118940342486 5.682546647396789e-08 7.245456990513001 0.08613336968499175 RIHT(ph)VR ddPTM_A549_PD325901_60min_R1 1 RIHTVR 6 1 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 1 RIHT(1)VR 50.607 0.059354 2975200.0 569.01 426.85 301.76 283.25 423.96 479.37 297.25 432.98 387.73 388.56 493.48 True False 626.7754763169775 462.82214753020526 322.2392482302911 300.74570919257604 394.18251218259934 475.4661696546171 308.56201141144146 424.343874233761 371.43505646739544 364.0262552879356 432.7850884274597 1.4482372269210773 1.069404098953331 0.7445710511911561 0.6949077434376182 0.9108042830562295 1.09861957439948 0.7129682136984264 0.9804955983479696 0.8582436557992749 0.8411247638190081 1.0 8.757506981863752 -5.348210941550329 3.2293964969854656 0.9045506909914706 1.479238050421208 0.6438244462970817 0.12369520507196087 0.1371012663514094 2.2745837066908043 0.01713610397873083 0.17151050741683765 4.485274823440282e-06 5.348210941550329 0.5746873594297374 RIILLVK ddPTM_A549_MK2206_60min_R1 1 RIILLVK 7 1 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 71.029 0.024021999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RIILLVK ddPTM_A549_PD325901_60min_R1 2 RIILLVK 7 1 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 97.071 0.012287000000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RILEDHGS(ph)PAGEIDDEDKDKDETETVK ddPTM_A549_MK2206_60min_R1 3 RILEDHGSPAGEIDDEDKDKDETETVK 27 3 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 RILEDHGS(1)PAGEIDDEDKDKDETETVK;RILEDHGS(1)PAGEIDDEDKDKDETETVK;RILEDHGS(1)PAGEIDDEDKDKDETETVK 178.33 1.1771e-49 122268000.0 17049.600000000002 17792.4 16271.8 15069.7 21266.9 16859.5 16806.800000000003 16545.0 25988.6 26430.6 24524.4 True False 19927.15565730079 18697.957162515097 18579.385917222873 18761.777176504536 18138.567182092087 18643.561099569637 19860.378009257045 18890.304416937473 20102.22359526629 20459.909103151083 18434.314640993147 1.0809816391539695 1.0143017262456657 1.007869632207922 1.0177637488503748 0.98395668812968 1.0113509215097793 1.0773591747800975 1.0247359223722006 1.0904784900743825 1.1098817342334788 1.0 14.170106159831436 -7.6806666009738525 24.999776007261136 1.0445405107321641 1.0169346050874444 0.17909198066545706 0.0371036488885128 55.270555430545826 17102.715666629272 0.005986897916467633 0.00888000265385773 2.086091718668024e-08 7.6806666009738525 -0.027605905644719764 RILEDHGS(ph)PAGEIDDEDKDKDETETVK ddPTM_A549_PD325901_60min_R1 2 RILEDHGSPAGEIDDEDKDKDETETVK 27 3 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;H0YBA1 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 RILEDHGS(1)PAGEIDDEDKDKDETETVK;RILEDHGS(1)PAGEIDDEDKDKDETETVK 161.62 7.4409e-42 52138000.0 6173.4 5920.8 6122.900000000001 6415.3 7669.1 6067.5 6415.400000000001 6053.599999999999 6885.9 7559.200000000001 7227.2 True False 6800.119023383118 6419.766595049407 6538.436813988761 6811.558510796592 7130.448872958711 6018.088291673217 6659.541557641582 5932.856199042669 6596.509569362277 7081.910821938862 6338.3002169954925 1.0728616175594374 1.0128530324006224 1.031575752195616 1.0746664369939603 1.1249780901572246 0.9494798424877918 1.0506825694031838 0.9360326895110351 1.040737949217745 1.1173201930305312 1.0 12.629880280026429 -7.264320696388768 24.99956203570073 1.0110121606498212 1.05943888774716 0.16217423039722678 0.05303704655276394 287.9867207464587 2498709.4504579445 0.0062342999294428 0.010220945927076066 5.4410072377083066e-08 7.264320696388768 0.04842672709733886 RILEPDDFLDDLDDEDYEEDT(ph)PKRR ddPTM_A549_PD325901_60min_R1 2 RILEPDDFLDDLDDEDYEEDTPKRR 25 3 J3KMZ8;Q92785 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 RILEPDDFLDDLDDEDYEEDT(1)PKRR;RILEPDDFLDDLDDEDYEEDT(1)PKRR 90.616 5.687e-09 5055600.0 305.66999999999996 307.9 395.1 458.78999999999996 487.78 744.63 617.5799999999999 629.23 456.31000000000006 481.27 647.82 True False 336.70139337763925 333.8478135751442 421.913861929308 487.12841631231095 453.520015549647 738.5659801612901 641.0823448527431 616.6795140286146 437.13287756076977 450.8825300659478 568.1422468693299 0.5926357267620673 0.5876130765046375 0.742620117152362 0.8574057271687952 0.798250821952965 1.2999666619249965 1.1283835137860976 1.085431540123521 0.7694074502812115 0.793608524186459 1.0 9.15010837506859 -6.160219107012492 1.4581337094231472 0.9472414522958942 0.5768985970722789 0.49750125398182965 0.15240246680319328 0.35188313643201274 1.3550662201725907 0.02538942127356869 0.11423564421439923 6.914820215501074e-07 6.160219107012492 -0.3703428552236153 RILIPS(ph)DIESSK ddPTM_A549_PD325901_60min_R1 2 RILIPSDIESSK 12 1 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 RILIPS(0.999)DIES(0.001)SK;RILIPS(0.992)DIES(0.006)S(0.002)K 55.173 0.0079627 4436600.0 1175.1599999999999 1353.3 1324.1599999999999 1416.2 1497.74 1682.55 1417.23 1328.75 1646.19 1694.94 1866.75 True False 1294.4613780929317 1467.3473404067638 1414.0254604209376 1503.6754575764394 1392.5439093224993 1668.847870647674 1471.1634631880133 1302.2470388657905 1577.0063590799311 1587.9211991397294 1637.1515843032334 0.7906790003467213 0.8962806831544937 0.8637107730147923 0.9184705142721399 0.8505894766703364 1.0193606301629854 0.8986116357784523 0.7954346142113791 0.9632622746726902 0.9699292444050278 1.0 10.676972192178466 -2.000000242999622 0.051003710653227716 1.2173048422388257 0.31635948972832556 0.31952357138685683 0.06079121218449265 263.6402725264513 0.9862211170241569 3.9880151439360385 18.434579593843925 0.009999994404728488 2.000000242999622 -0.9009453525105002 RILS(ph)DVTHSAVFGVPASK ddPTM_A549_MK2206_60min_R1 3 RILSDVTHSAVFGVPASK 18 1 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 RILS(0.966)DVT(0.034)HSAVFGVPASK;RILS(0.698)DVT(0.254)HS(0.048)AVFGVPASK;RILS(0.978)DVT(0.022)HSAVFGVPASK 156.23 3.1825e-23 46704000.0 3723.21 3953.13 3774.4999999999995 3501.9 5617.5 3587.3899999999994 3250.07 3992.9999999999995 6071.3 5974.7 5138.099999999999 True False 4351.596824255049 4154.3274318165795 4309.780856731136 4359.8656572062655 4791.173191457254 3967.0052286832424 3840.5656494125037 4559.019978049637 4696.160243873857 4625.011120390638 3862.167965654077 1.1267238667384278 1.0756464940832846 1.1158967955453107 1.1288648489600066 1.2405398299775514 1.0271446669232085 0.9944066864948183 1.1804302709236378 1.2159388938120768 1.197516825140817 1.0 11.915195193110874 RILS(ph)DVTHSAVFGVPASK ddPTM_A549_PD325901_60min_R1 4 RILSDVTHSAVFGVPASK 18 1 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 RILS(0.997)DVT(0.003)HSAVFGVPASK;RILS(0.889)DVT(0.11)HSAVFGVPASK;RILS(0.854)DVT(0.138)HS(0.009)AVFGVPASK;RILS(0.969)DVT(0.029)HS(0.002)AVFGVPASK 169.08 1.3740999999999998e-30 137953000.0 6659.870000000001 6433.6900000000005 6994.61 7381.15 7799.51 8383.03 7519.860000000001 8018.210000000001 7531.4800000000005 8473.36 8930.800000000001 True False 7335.975099662836 6975.879635337019 7469.306296606823 7837.066871692084 7251.699324448784 8314.761383064733 7806.032387325284 7858.28051138594 7214.958087027206 7938.3506035273385 7832.368217005666 0.9366228574053682 0.8906475592134399 0.9536459586245496 1.000599902169591 0.9258629221113313 1.0615896945462413 0.9966375649164193 1.0033083600850141 0.9211719734220439 1.0135313335105418 1.0 12.935232875492462 -5.946685313315781 5.953048608176061 0.9739181297660086 0.9145262182409498 0.2963088173692616 0.040662894611536535 0.21741674773413375 16.6117274021006 0.006008045167906177 0.019042775220238315 1.1306148533976667e-06 5.946685313315781 -0.05939191152505874 RINPPSSGGTSS(ph)SPIK ddPTM_A549_PD325901_60min_R1 3 RINPPSSGGTSSSPIK 16 1 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2;A0A0A0MT46 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 RINPPSSGGTS(0.006)S(0.497)S(0.497)PIK;RINPPS(0.003)S(0.003)GGT(0.002)S(0.011)S(0.529)S(0.452)PIK;RINPPS(0.007)S(0.007)GGT(0.028)S(0.112)S(0.473)S(0.373)PIK 151.95 2.2359000000000003e-15 58018700.0 8608.300000000001 8428.7 8679.5 9967.2 10236.599999999999 10354.5 10084.699999999999 9256.699999999999 10429.6 11646.3 11088.0 True False 9482.208278904482 9139.01612952522 9268.543064073465 10582.85130684641 9517.616530352852 10270.176385023531 10468.478777059583 9072.067856759331 9991.280181910979 10910.950630430005 9724.24629262315 0.9751098433302458 0.9398174269257364 0.9531374242448607 1.08829527640354 0.97875107683903 1.0561411214784355 1.0765336934134435 0.9329327521909269 1.0274606258677759 1.1220356109971314 1.0 13.247370718613489 -6.1196440980507045 17.871068870305315 1.0168683111905548 0.9543154952310589 0.2628387210336851 0.052918787112830816 2.044079845124141 295.4110451030769 0.005488722109891774 0.014522150084679579 7.591994799862511e-07 6.1196440980507045 -0.06255281595949591 RINPPSSGGTSSS(ph)PIK ddPTM_A549_MK2206_60min_R1 1 RINPPSSGGTSSSPIK 16 1 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2;A0A0A0MT46 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 RINPPSSGGT(0.001)S(0.003)S(0.121)S(0.876)PIK 81.723 9.709600000000001e-05 32926000.0 1245.5 1707.5 1575.7 1472.6 1821.6 1363.0 1553.5 1077.5 2221.6 2185.5 1866.0 True False 1455.7099504485816 1794.404456677826 1799.1579536233287 1833.387066107525 1553.6450530589293 1507.2317553138255 1835.7508411702888 1230.2389247053563 1718.411147166202 1691.7940321043293 1402.6207010199314 1.0378500398504356 1.279322667470261 1.2827116784423978 1.3071153625312653 1.1076729809628354 1.074582568343548 1.3088006186101502 0.877100219475425 1.2251431523266696 1.2061664503269645 1.0 10.453909210412505 -6.787411184255661 22.356092787181144 1.104183160905891 1.2345023067103489 0.14917866718589978 0.12738173383918389 86.59767006022281 74541.62647719345 0.01853797101174036 0.03504865392078585 1.6315065276754503e-07 6.787411184255661 0.13031914580445791 RINPPSSGGTSSS(ph)PIK ddPTM_A549_PD325901_60min_R1 1 RINPPSSGGTSSSPIK 16 1 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2;A0A0A0MT46 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 RINPPSSGGTS(0.001)S(0.036)S(0.963)PIK 111.65 1.5477e-07 56280000.0 4384.5 3825.6 4809.3 5025.8 5197.5 4521.5 4862.1 4679.2 4153.1 4561.3 5146.3 True False 4829.6112123016965 4147.99673794437 5135.68801867026 5336.232251580052 4832.4455304015955 4484.678403098545 5047.129876143212 4585.86968523861 3978.5596497942897 4273.29873956367 4513.337725083557 1.070075298256632 0.9190530358256264 1.1378913636637242 1.1823250500229872 1.0707032854077256 0.9936500825485018 1.1182699331567907 1.0160705811470623 0.8815116200329619 0.9468156384163688 1.0 12.139979021571303 -8.5409241400137 7.722589054974596 0.9441643567367729 1.0684117830293967 0.3832807401432937 0.07087128434530574 0.13924634948772674 41.29539653359926 0.013186979107829476 0.015087003556434404 2.877901065536917e-09 8.5409241400137 0.12424742629262375 RINS(ph)LLEYSR ddPTM_A549_MK2206_60min_R1 1 RINSLLEYSR 10 1 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 RINS(1)LLEYSR 40.725 0.040286 82848000.0 163.07 234.39 362.55 239.38 380.14 263.63 284.12 172.25 353.24 302.4 338.46 True False 190.59222932127676 246.31944983936475 413.96504162349277 298.02811074617654 324.22190956841297 291.5271516165689 335.7409262911506 196.66696499350124 273.2317040083676 234.0876299740788 254.41104097920987 0.7491507781568792 0.9681948114016548 1.6271504571113382 1.171443305286939 1.2744018825618026 1.1458903296590501 1.3196790713127378 0.7730284198222851 1.0739773830440627 0.9201158451028394 1.0 7.9910174721120395 -8.234174466305221 24.962669559507003 1.0162669119688028 1.1905697051596804 0.18462453149210023 0.22011738928732863 1172.8645885395729 1073829.739604299 0.034484249898844126 0.04451339003813099 5.832107677288457e-09 8.234174466305221 0.1743027931908776 RINS(ph)LLEYSR ddPTM_A549_PD325901_60min_R1 2 RINSLLEYSR 10 1 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 RINS(1)LLEYSR;RINS(0.998)LLEYS(0.001)R 67.115 0.001983 2831200.0 343.44 312.36 275.4 366.01 317.48 332.44 405.92 241.94 311.61 446.77 500.74 True False 378.3057759728349 338.68367342751526 294.09030011473396 388.6176064309792 295.1813000465416 329.73271886013066 421.3675077279472 237.1143169017417 298.5141153529647 418.5608659537546 439.15215445239113 0.8614457930749999 0.7712217052648713 0.6696774617477518 0.8849270178705444 0.6721617941613502 0.7508393515028907 0.9595023124806917 0.5399365903086956 0.6797509982051719 0.9531112661298151 1.0 8.778577071316512 -10.834598012338189 1.10555796257033 0.9986600036042191 0.7492639058248859 0.3656464190188724 0.11218461897008608 0.38735455301205657 0.8477917677427974 0.0732044387915182 0.018419026853536965 1.463531207994837e-11 10.834598012338189 -0.24939609777933325 RIPHS(ph)PAR ddPTM_A549_MK2206_60min_R1 4 RIPHSPAR 8 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 RIPHS(1)PAR;RIPHS(1)PAR;RIPHS(1)PAR;RIPHS(1)PAR 84.198 0.0013421 173495000.0 4758.99 5047.32 5014.45 4187.61 6812.639999999999 5387.45 4730.54 5104.7 7170.52 7502.43 8483.89 True False 5562.191165865353 5304.207029153216 5725.574411719552 5213.574637988954 5810.509680649635 5957.546383100118 5590.017884898423 5828.3068574881045 5546.408668967501 5807.625852336075 6377.105969547688 0.8722124412588153 0.8317577055300887 0.897832722093789 0.8175455548151633 0.911151501699408 0.9342084656502379 0.8765759753079514 0.9139422937802446 0.8697375730390904 0.9106992858624231 1.0 12.63868613958879 -14.99999999998808 0.23068138793399112 1.6839926335106952 0.8641393768841273 0.22403334086469096 0.041931089190570994 19.326696203945513 0.24215953272451154 6.005264944513038 0.019532462789151207 1.0000000000274453e-15 14.99999999998808 -0.8198532566265678 RIPHS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 RIPHSPAR 8 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 RIPHS(1)PAR;RIPHS(1)PAR 97.28399999999999 0.0010304000000000001 263960000.0 3655.8 4415.700000000001 4821.9 4608.6 4984.299999999999 4196.4 4872.200000000001 5090.1 4462.6 4907.9 5017.3 True False 4026.9341247422826 4787.8265359005 5149.143130440218 4893.2627551099995 4634.219962901525 4162.225909711986 5057.614237170144 4988.573962393799 4275.052441109528 4598.014356412548 4400.203907285185 0.9151698897578588 1.0880919695502176 1.1702055720452076 1.112053636198196 1.0531830025487892 0.9459165978242073 1.1494045148218064 1.1337142704078964 0.971557803044434 1.0449548369337747 1.0 12.10335466505132 -8.781129284344383 24.82969689239708 0.9865689515759464 1.0740691275687788 0.11042535741092141 0.07748170717359987 247.9974312054737 312732.53181324195 0.013084129438002658 0.013938377207592044 1.6552771336410982e-09 8.781129284344383 0.08750017599283244 RIPS(ph)IVSSPLNSPLDR ddPTM_A549_PD325901_60min_R1 1 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPS(0.975)IVS(0.019)S(0.006)PLNSPLDR 42.64 0.031669 1066800.0 466.08 341.17 279.7 283.89 455.17 475.25 465.87 472.41 400.84 424.24 682.26 True False 513.3960984900388 369.92159323621905 298.6821239727347 301.42524053903065 423.2004294512544 471.3797215686353 483.5989377838456 462.9874119515244 383.9940887586481 397.4534139987489 598.3463452024776 0.8580249593006337 0.6182399143944622 0.49917932376049207 0.5037638199946384 0.7072833866947836 0.7878041294112403 0.8082257736866397 0.773778290222282 0.6417588940544232 0.6642530988707762 1.0 9.224837001730158 -14.999999999998574 0.24266673076750855 2.9609700349080557 0.6429169728530338 0.0 0.15138087117477583 27.039984174007262 0.3447279126282136 25.430470252854583 0.06561551580539991 1.0000000000032845e-15 14.999999999998574 -2.318053062055022 RIPSIVS(ph)SPLNSPLDR ddPTM_A549_MK2206_60min_R1 1 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPS(0.017)IVS(0.491)S(0.491)PLNS(0.001)PLDR 43.598 0.026663 37527000.0 314.3 334.58 136.0 207.23 551.83 242.44 249.79 389.63 481.76 318.62 436.93 True False 367.3461561027612 351.60869289327496 155.2868450166736 258.00135930290816 470.6565380047807 268.0948398813524 295.1736096658683 444.8612456918309 372.64212921263515 246.6435207087996 328.42822234546543 1.1184975319092978 1.0705800201403721 0.47281821247788886 0.785563912444537 1.4330575327649793 0.816296595849032 0.8987461782604741 1.3545158893923936 1.1346227390308201 0.7509815050223103 1.0 8.359434295235115 RIPSIVSS(ph)PLNSPLDR ddPTM_A549_MK2206_60min_R1 1 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPSIVS(0.057)S(0.942)PLNSPLDR 65.02199999999999 0.0012214 31949000.0 256.16 264.82 235.29 188.91 238.98 241.94 228.26 285.16 422.81 338.19 372.87 True False 299.3935454892883 278.298206862326 268.6576600292141 235.1929584804922 203.82635857489166 267.5419302132257 269.7318873547025 325.58230326587426 327.0442100888291 261.79264411684443 280.2760883115228 1.0682093763079663 0.992943095998263 0.9585464876711317 0.8391474274433238 0.727234206110161 0.954565663539077 0.9623792346313161 1.1616485203118514 1.1668644730239142 0.9340527252751782 1.0 8.13070485620754 -8.07717255613495 4.537427908274497 1.0870529730135632 0.9179538440365315 0.2846616545894316 0.1031150559511834 0.1916777274163313 7.291222514194618 0.017417410328158918 0.022871306098600986 8.371965767512104e-09 8.07717255613495 -0.16909912897703172 RIPSIVSS(ph)PLNSPLDR ddPTM_A549_PD325901_60min_R1 1 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPSIVS(0.166)S(0.834)PLNSPLDR 105.21 3.7854999999999996e-07 53156000.0 883.18 1021.7 755.93 680.34 956.45 1086.5 844.93 817.17 1136.4 983.93 1117.8 True False 972.839783437247 1107.8022446564612 807.2319555763648 722.3630566357542 889.272251573373 1077.6519042279267 877.0842735134366 800.8709032925367 1088.6410599374515 921.8044918814556 980.3176863180149 0.9923719596360091 1.1300441276513808 0.8234391430886608 0.7368662900991666 0.9071266019012669 1.0992884442139266 0.8946939198941583 0.8169503768727623 1.110498234532817 0.940312007777469 1.0 9.937105541251706 -8.776493929463772 24.937505704331276 1.0521797204211731 0.9264600236706005 0.08680743310624439 0.11841109369003941 288.6056883068132 478066.88124252623 0.021070283754461464 0.022473746967186438 1.6730390218512234e-09 8.776493929463772 -0.1257196967505726 RIPSIVSSPLNS(ph)PLDR ddPTM_A549_MK2206_60min_R1 2 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPSIVS(0.001)S(0.003)PLNS(0.996)PLDR;RIPSIVSSPLNS(1)PLDR 71.592 0.00045296 4621900.0 641.08 751.04 520.8399999999999 626.09 751.35 586.86 542.26 874.4300000000001 892.51 738.62 971.06 True False 749.2786310988173 789.264728048793 594.7029438123843 779.4820781062484 640.8274103073264 648.9611356738602 640.7816228728685 998.3831303295638 690.3579100456012 571.7652290061313 729.9190021074025 1.0265229825987816 1.0813045362157296 0.8147519684997567 1.0679021588090578 0.8779431806229825 0.8890865065852472 0.877880451149814 1.367799889367257 0.945800709465596 0.7833269545735159 1.0 9.511592569190189 RIPSIVSSPLNS(ph)PLDR ddPTM_A549_PD325901_60min_R1 2 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPSIVS(0.002)S(0.034)PLNS(0.964)PLDR;RIPSIVSSPLNS(1)PLDR 108.13 2.7703000000000004e-07 6242600.0 1467.52 1404.4 1130.02 1021.4200000000001 1324.9499999999998 1126.48 752.8299999999999 1341.1399999999999 1927.74 1705.7 1366.8600000000001 True False 1616.5015500688762 1522.7537167422292 1206.7099525622789 1084.5107935868707 1231.8900828293588 1117.3063203632537 781.4793576143826 1314.3899105960227 1846.7237916964289 1598.0018109034177 1198.7448852394373 1.3484950550975625 1.27029006379291 1.0066445057834392 0.9047052520856016 1.0276499178416107 0.9320634724877954 0.6519146544331573 1.09647175706905 1.5405477966461265 1.3330624643993645 1.0 10.227308944280516 -8.534101559900503 24.882767386308746 1.2585876962091214 1.011250997925618 0.23870308649908223 0.20884657046849542 287.53792360301475 637514.6961542829 0.04397018825994935 0.04987785189978141 2.923468643843504e-09 8.534101559900503 -0.24733669828350346 RIPSIVSSPLNSPLDRS(ph)GIDITDFQAK ddPTM_A549_MK2206_60min_R1 2 RIPSIVSSPLNSPLDRSGIDITDFQAK 27 2 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPSIVSSPLNS(0.001)PLDRS(0.997)GIDIT(0.001)DFQAK;RIPSIVSSPLNS(0.027)PLDRS(0.973)GIDITDFQAK 117.49 4.3819e-18 5349500.0 1947.03 2302.7 2126.4 2351.3 3686.6 2362.3 2241.5 2590.5 3598.3 3107.0 3303.4 True False 2275.6410636867945 2419.897594373077 2427.955494437168 2927.368605553867 3144.3060236094907 2612.27701803217 2648.7515355540427 2957.7113080735267 2783.2907953043527 2405.1265420947843 2483.074610798092 0.9164610091822308 0.9745569399524772 0.9778020700138333 1.1789289749183063 1.266295426619851 1.0520332360019382 1.0667224915576339 1.191148785949239 1.120905019607835 0.9686082454533034 1.0 11.277911896563957 -6.093504349250835 6.75473326062575 1.0895451210220817 0.9527676014404697 0.37994111382121876 0.08362938059073355 0.2258981367060719 13.830309771831226 0.012409065405637836 0.033319535137148665 8.062981266254693e-07 6.093504349250835 -0.136777519581612 RIPSIVSSPLNSPLDRS(ph)GIDITDFQAK ddPTM_A549_PD325901_60min_R1 2 RIPSIVSSPLNSPLDRSGIDITDFQAK 27 2 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPSIVSSPLNSPLDRS(0.949)GIDIT(0.051)DFQAK;RIPSIVSSPLNS(0.003)PLDRS(0.997)GIDITDFQAK 146.26 2.3406999999999997e-33 9189600.0 3632.7 3288.8 4237.1 4392.6 4532.0 4638.4 3934.4 4387.7 4125.799999999999 4190.200000000001 4531.1 True False 4001.4890297476027 3565.958718044603 4524.6550857521415 4663.920925681588 4213.687954551232 4600.626408256617 4084.1257449862896 4300.183881415938 3952.4069738559783 3925.630056895996 3973.8034250094456 1.0069670292606614 0.8973666627800359 1.1386207624855995 1.1736667436362942 1.060366481148024 1.1577387998868316 1.027762399942212 1.0821330150234385 0.9946156241602675 0.9878772644338 1.0 11.956304792182134 -8.766192865114135 24.555364905998754 0.9974573712503961 1.0696462530195767 0.16734310101363115 0.07326762690274687 128.88257248906132 665775.1784545638 0.013005544654008485 0.014069397399925361 1.7131963280420046e-09 8.766192865114135 0.07218888176918059 RIPVLS(ph)PKPAVAPPAPPSSSQLCR ddPTM_A549_MK2206_60min_R1 2 RIPVLSPKPAVAPPAPPSSSQLCR 24 2 Q6PJT7;Q6PJT7-5;Q6PJT7-4;G3V256;Q6PJT7-10;G3V411;Q6PJT7-8 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 RIPVLS(1)PKPAVAPPAPPSSSQLCR;RIPVLS(1)PKPAVAPPAPPSSSQLCR 59.971000000000004 9.6082e-05 5602300.0 2356.3999999999996 2629.6 2838.0 2607.8999999999996 3877.8 2976.5 2563.8999999999996 2405.0 4175.5 3541.7 3307.5 True False 2754.1027115512134 2763.4354080702824 3240.4710746861765 3246.8356170730776 3307.3807568905986 3291.471254359208 3029.727442340847 2745.916115003601 3229.7559169033475 2741.6275101825227 2486.1564676438484 1.1077752938700998 1.111529159180079 1.303405926722383 1.3059659194138056 1.3303188274489544 1.3239195912228983 1.2186390847765691 1.1044824212556217 1.299095997752794 1.1027574273234646 1.0 11.279701380726785 -10.882902442872544 0.8920740858397005 0.984432693126328 1.240838816623408 0.36008632397649876 0.09003136918124509 0.4776458537544795 0.6035697525035495 0.08667701583196352 0.016313977030664024 1.309476042264621e-11 10.882902442872544 0.2564061234970799 RIPVLS(ph)PKPAVAPPAPPSSSQLCR ddPTM_A549_PD325901_60min_R1 1 RIPVLSPKPAVAPPAPPSSSQLCR 24 2 Q6PJT7;Q6PJT7-5;Q6PJT7-4;G3V256;Q6PJT7-10;G3V411;Q6PJT7-8 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 RIPVLS(1)PKPAVAPPAPPSSSQLCR 46.415 0.0025509 3151100.0 1752.1 1800.4 1631.0 1686.1 1838.4 2109.6 2226.1 2208.6 2317.1 1897.2 2150.2 True False 1929.9719021721523 1952.1260265043497 1741.6894679997488 1790.2465675890642 1709.2771261356997 2092.4201170356496 2310.815453668661 2164.547740386819 2219.7203449323015 1777.4104682218222 1885.7390312408272 1.0234565176827355 1.0352047627819632 0.9236110825227535 0.9493607216747652 0.9064229449665606 1.10960216783487 1.22541635686892 1.147851163139225 1.1771089785799855 0.9425537886078944 1.0 10.88091431890128 -7.277195328062476 24.162142522570992 1.1043716352946755 0.9679080380031476 0.3979359226040954 0.08126273604009314 429.3458059098499 658411.6224648212 0.01296039634231265 0.020765931471881965 5.282076319508346e-08 7.277195328062476 -0.1364635972915279 RIPVS(ph)PEQAR ddPTM_A549_MK2206_60min_R1 3 RIPVSPEQAR 10 1 C9J7L6;Q9H981-2;Q9H981 C9J7L6 ACTR8 Actin-related protein 8 1 RIPVS(1)PEQAR;RIPVS(1)PEQAR;RIPVS(1)PEQAR 99.404 0.00019837 35320700.0 3020.79 4087.8 3358.9500000000003 3415.8 4489.6 3798.2999999999997 3586.7699999999995 3279.63 6092.3 4771.4 4872.7 True False 3530.625500775249 4295.851559594501 3835.2996181526178 4252.671153341086 3829.185787337158 4200.233584892515 4238.43968109711 3744.5275959456417 4712.403777403972 3693.537426118783 3662.6741103214467 0.9639474860255561 1.1728729966689515 1.04713100391452 1.1610836851023745 1.0454617779251723 1.146766940868755 1.1571981436058292 1.0223480121787334 1.2866019840870848 1.0084264433219334 1.0 11.838681626347672 -7.28523782409178 23.372633358118613 1.1316108581534303 1.0862543486614353 0.0 0.0956303088498851 1104.895717660554 1085124.1578316467 0.016972666775077572 0.027144869416369833 5.185160165053667e-08 7.28523782409178 -0.04535650949199499 RIPVS(ph)PEQAR ddPTM_A549_PD325901_60min_R1 3 RIPVSPEQAR 10 1 C9J7L6;Q9H981-2;Q9H981 C9J7L6 ACTR8 Actin-related protein 8 1 RIPVS(1)PEQAR;RIPVS(1)PEQAR;RIPVS(1)PEQAR 93.228 0.00025243 68755800.0 9632.9 11106.800000000001 9323.2 10694.5 10664.7 10260.6 10156.2 10318.5 11126.5 10645.9 11504.4 True False 10610.824916633828 12042.809015317991 9955.928416956025 11355.074976028258 9915.648263217685 10177.04107549109 10542.699748685889 10112.68942279334 10658.891898446016 9973.716057159334 10089.431732400233 1.0516771606233524 1.1936062738444297 0.9867680044837919 1.1254424706164232 0.9827756930428028 1.0086832782474275 1.0449250293086452 1.0023051536508663 1.0564412527037645 0.9885310017144672 1.0 13.30055729929248 -6.125215848534328 1.2941571898137836 1.0245126548304153 1.1129320986855136 0.25042898970527416 0.054809497835230814 0.5022098915063254 1.4588858135736888 0.007287528074771432 0.03817264250194041 7.495215973018704e-07 6.125215848534328 0.08841944385509826 RIPYAPS(ph)GEIPK ddPTM_A549_PD325901_60min_R1 2 RIPYAPSGEIPK 12 1 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 1 RIPYAPS(1)GEIPK;RIPYAPS(1)GEIPK 101.01 9.779799999999999e-05 45663000.0 7651.299999999999 6749.200000000001 7419.8 9218.2 10702.4 9956.8 8371.2 8314.5 8256.7 8951.7 9125.2 True False 8428.054343410642 7317.978770319464 7923.352246882 9787.587277948825 9950.700345275623 9875.715121966516 8689.770596896404 8148.6607749009345 7909.6996124476855 8386.488134293322 8002.8582494088005 1.0531305292122664 0.9144206410078636 0.9900652991657483 1.2230114507740868 1.24339330213811 1.2340234968795143 1.0858333767861437 1.0182188064499211 0.988359329372353 1.0479366087626083 1.0 12.966299640385081 -8.275459101605176 3.5651979095989614 0.9951754821872332 1.1100332643422584 0.1677370028057652 0.09770439335345983 0.3010927699558294 8.285877351217117 0.017856347047551565 0.022437966292945095 5.303235319235471e-09 8.275459101605176 0.11485778215502518 RIPYAPSGEIPK ddPTM_A549_MK2206_60min_R1 1 RIPYAPSGEIPK 12 1 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 0 73.881 0.0013869000000000002 5769500.0 2111.3 2610.9 2338.0 2280.4 2937.0 2663.9 2617.1 2428.8 3349.1 2986.4 3344.5 False True 2467.6358236708875 2743.7836579444424 2669.5635562425205 2839.0981023710474 2504.971190620374 2945.7921298462934 3092.5931937088912 2773.089837888047 2590.5341974137245 2311.770165855122 2513.9683464957966 0.9815699657119822 1.0914153560322204 1.0618922708249716 1.1293292957838736 0.9964211339860488 1.1717697774327243 1.2301639350470088 1.1030726945124183 1.0304561714250111 0.9195701167349551 1.0 11.295750769487718 -8.851203011425095 3.9727840068241176 1.013048114906053 1.0992693548856962 0.3009760535387974 0.07271543510602109 0.23646664185315597 6.843455537708166 0.012186920376945026 0.012918200409566536 1.4086301787976453e-09 8.851203011425095 0.08622123997964315 RIPYAPSGEIPK ddPTM_A549_PD325901_60min_R1 2 RIPYAPSGEIPK 12 1 O60701;O60701-3;O60701-2 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 134.56 2.1713e-08 11516000.0 3912.6 4334.5 4251.0 4036.2 4882.9 4637.8 4807.0 4460.9 4973.1 4924.6 4942.0 False True 4309.804271696113 4699.783526929071 4539.498423339627 4285.506907124715 4539.941949090517 4600.031294457688 4989.933015491331 4371.923849991651 4764.097901421099 4613.659915562505 4334.165329919155 0.9943792965037869 1.0843572335568326 1.0473754639683537 0.9887732887210033 1.0474777964169633 1.0613419065265544 1.1513019545067535 1.0087118319672408 1.0991961632229574 1.0644863692010023 1.0 12.08153847180506 -6.985946616269954 24.924194388863032 1.0543686338260263 1.032039982119815 0.09506020594820874 0.04558674932259444 721.2817057750581 1279213.7360063663 0.007462425888111219 0.014098848567720583 1.0328883611959979e-07 6.985946616269954 -0.022328651706211344 RIQDPTEDAEAEDT(ph)PR ddPTM_A549_MK2206_60min_R1 2 RIQDPTEDAEAEDTPR 16 1 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 RIQDPTEDAEAEDT(1)PR;RIQDPTEDAEAEDT(1)PR 161.8 1.0038e-20 32388000.0 861.05 1010.55 1041.3400000000001 1409.3000000000002 1453.03 1374.81 1034.69 1288.04 1699.8400000000001 1771.21 1844.45 True False 1006.3741893486558 1061.982678591963 1189.017670512228 1754.5785632658815 1239.2912118172023 1520.2914816749808 1222.6797797557035 1470.6236144570648 1314.8289540866938 1371.0924308412298 1386.4221607696738 0.7258786088574681 0.7659879570897814 0.857615886529211 1.2655442280955933 0.8938772380334777 1.0965574012687371 0.8818957272559258 1.0607329109920216 0.9483611783562123 0.9889429566533084 1.0 10.437150904700529 -6.0075437737708155 21.194270178144404 0.995216327765978 0.7623997062164821 0.5187641963274063 0.10196037064379829 27.388754820886128 76957.1847125785 0.01272715723606465 0.0371598171578493 9.827798108472294e-07 6.0075437737708155 -0.2328166215494959 RIQDPTEDAEAEDT(ph)PR ddPTM_A549_PD325901_60min_R1 2 RIQDPTEDAEAEDTPR 16 1 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 RIQDPTEDAEAEDT(1)PR;RIQDPTEDAEAEDT(1)PR 144.95 1.4561000000000003e-14 36429000.0 1143.65 1183.83 1024.41 1304.6599999999999 1361.27 1260.94 1424.12 1380.6100000000001 1467.12 1379.6100000000001 1449.4 True False 1259.7525060893684 1283.595508751746 1093.9326228777584 1385.2458851021581 1265.659091326558 1250.671322703325 1478.3156659083666 1353.0726504824079 1405.4620484472305 1292.5011891542842 1271.1329885036068 0.9910469773680913 1.0098042615216918 0.8605965172578435 1.0897725868422992 0.9956936864776889 0.9839028126991105 1.1629905598222714 1.064461911318391 1.105676637423876 1.0168103580380148 1.0 10.311899260573654 -6.289314974368294 24.981474437917342 1.0535659492377925 0.9594147067878196 0.33526934269679753 0.061678124189686746 648.2546282369793 580949.8908105115 0.009097698008636738 0.021145660802945256 5.136709738669165e-07 6.289314974368294 -0.09415124244997286 RIQDPTEDAEAEDT(ph)PRKR ddPTM_A549_PD325901_60min_R1 1 RIQDPTEDAEAEDTPRKR 18 3 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 RIQDPTEDAEAEDT(1)PRKR 112.85 2.6041000000000003e-10 12464000.0 914.04 893.99 1034.1 1003.2 998.09 1115.2 1160.5 1251.4 1007.9 1211.5 1456.9 True False 1006.8326679193157 969.3296747581775 1104.280244548462 1065.1653855674926 927.9876016235746 1106.118180943382 1204.6634625499664 1226.4398452956912 965.5414680666639 1135.005683244116 1277.7105360500243 0.7879974685282681 0.7586457553639729 0.8642648028576855 0.83365156310004 0.7262893867122674 0.8657032635599052 0.9428297165601537 0.9598729999418852 0.7556809158446679 0.8883120638207517 1.0 10.319345316951752 -7.505201428251094 22.279658562922073 0.8930167566277575 0.7980550512515269 0.39098114672544415 0.06724120148809505 240.00272598956784 302487.4242271337 0.01422547378626989 0.022414245602915 3.124629809913905e-08 7.505201428251094 -0.09496170537623061 RIQPQPPDEDGDHS(ph)DKEDEQPQVVVLK ddPTM_A549_MK2206_60min_R1 5 RIQPQPPDEDGDHSDKEDEQPQVVVLK 27 2 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK 208.57 1.1457999999999999e-81 124282000.0 8100.95 8267.1 8107.099999999999 7638.4 12373.699999999999 9225.5 8919.300000000001 8256.86 12599.0 11944.5 12647.9 True False 9468.192310787985 8687.860078360904 9256.808685549075 9509.8083429008 10553.545121341278 10201.736286608728 10539.821356710758 9427.295190573246 9745.346616468762 9246.229154184475 9507.077365718102 0.9959098834021974 0.9138307961696787 0.973675539754049 1.0002872572797763 1.1100724981366692 1.0730675573752582 1.10862896674394 0.9916081281264687 1.0250623027019685 0.972562733898198 1.0 13.214786185366743 -6.304277420154775 3.375046851386923 1.0289122738463627 0.9545786565357677 0.33468333498196634 0.04690512935698805 0.22912578359405486 5.320419061947761 0.006764993474413055 0.01775783662095338 4.962752077570529e-07 6.304277420154775 -0.07433361731059507 RIQPQPPDEDGDHS(ph)DKEDEQPQVVVLK ddPTM_A549_PD325901_60min_R1 2 RIQPQPPDEDGDHSDKEDEQPQVVVLK 27 2 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK 183.59 4.7195e-58 283550000.0 8583.7 9180.1 9004.7 8889.7 10416.3 9812.3 9967.4 10327.4 10087.1 10780.1 11018.4 True False 9455.110905014048 9953.739244563747 9615.813091659928 9438.796579026459 9684.695022284204 9732.3918820577 10346.714861370569 10121.411905311432 9663.174265835158 10099.442646256628 9663.206651392391 0.9784651457962602 1.0300658573962602 0.9950954624647674 0.9767768526057966 1.0022237308656456 1.0071596555016589 1.0707330635301782 1.0474175157842678 0.9999966485703554 1.0451440200548106 1.0 13.238286299022434 -5.220176059465958 21.46662025645059 1.0076212848405812 0.9784646012429198 0.045284374627817314 0.028175412387324794 7564.642860949771 3934876.09357047 0.0037349678230195874 1.2974307311224653 6.023153628042269e-06 5.220176059465958 -0.029156683597661437 RIQPQPPDEDGDHS(ph)DKEDEQPQVVVLKK ddPTM_A549_PD325901_60min_R1 2 RIQPQPPDEDGDHSDKEDEQPQVVVLKK 28 3 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 RIQPQPPDEDGDHS(1)DKEDEQPQVVVLKK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLKK 134.77 6.2937e-28 18935900.0 2553.2 2649.3 2742.8 3242.7 2960.5 3564.9 2717.9 3318.6 3660.8 3376.5 2855.2 True False 2812.3989844335024 2872.5658087191605 2928.9429017962702 3442.994214293967 2752.56469317055 3535.868636338827 2821.3311717919482 3252.4079196086627 3506.949306774923 3163.307213762905 2504.0285006040403 1.1231497499948881 1.1471777609664662 1.1696923182342889 1.3749820393271972 1.099254538239703 1.4120720413069894 1.1267168768691593 1.2988701681406951 1.4005229197387132 1.2632872241669089 1.0 11.290035267637935 -4.413612691858431 21.03436837016549 1.2072635996693488 1.2113913782834251 0.0 0.13217224574943293 0.0 0.0 0.020943583669524833 0.0 3.858222844377356e-05 4.413612691858431 0.004127778614076316 RIQQHVGEEAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RIQQHVGEEASPR 13 1 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 RIQQHVGEEAS(1)PR;RIQQHVGEEAS(1)PR 97.235 6.8583e-05 9082500.0 846.5600000000001 987.6700000000001 1009.84 1068.35 861.55 677.8 842.4300000000001 919.4200000000001 1240.4099999999999 1298.98 1386.1100000000001 True False 989.4386315951439 1037.9381843203441 1153.0504968502767 1330.0957979600541 734.8171362883835 749.5243461127737 995.4886264094542 1049.7506006056597 959.4591155277408 1005.5395158192094 1041.9006323101485 0.9496477887735959 0.996196904131809 1.1066799089023314 1.2766052315477596 0.7052660431341847 0.7193817940688787 0.9554544795718307 1.0075342773121327 0.9208739161626049 0.9651011666915706 1.0 10.025001976760985 -6.754927894183295 24.99997751515352 0.9311732856382611 1.077876093724302 0.3163932658319386 0.1249514997265777 190.80536199252296 732564.6384519157 0.01902155274775158 0.03887389528832411 1.7582155058579285e-07 6.754927894183295 0.14670280808604086 RIQQHVGEEAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RIQQHVGEEASPR 13 1 Q8TER5;Q8TER5-4;Q8TER5-3;Q8TER5-2 Q8TER5 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 RIQQHVGEEAS(1)PR;RIQQHVGEEAS(1)PR 95.197 7.1202e-05 14227100.0 2527.4 2525.9 2216.3999999999996 2191.1400000000003 2652.0 2747.2 2591.8999999999996 2716.1 2686.5 2323.22 2675.0 True False 2783.9797874264577 2738.76645764682 2366.818232295919 2326.4817413600053 2465.7326689033257 2724.8277140312557 2690.5361728421008 2661.925254760771 2573.5957475554064 2176.531492716795 2345.991958222125 1.1866962193409458 1.1674236341894169 1.0088773851081643 0.9916835960184172 1.0510405460946015 1.1614821203804235 1.1468650450452027 1.1346693859846269 1.0970181455804169 0.9277659648783481 1.0 11.195982352652146 -10.409947485228315 0.8537414348406355 1.0024049232213958 1.1022054768485652 0.3739128283212281 0.06606524147662238 0.6692461502524393 0.9115821273896526 0.03912907842065825 0.012845115572697123 3.8909219107268594e-11 10.409947485228315 0.09980055362716933 RIQVEQTRDEDLDTDS(ph)LD ddPTM_A549_MK2206_60min_R1 2 RIQVEQTRDEDLDTDSLD 18 2 V9GYT7 V9GYT7 PSIP1 1 RIQVEQTRDEDLDTDS(1)LD;RIQVEQTRDEDLDT(0.002)DS(0.998)LD 79.467 0.00010451 15548400.0 2386.8 2169.0 1705.54 1644.75 2852.3 2351.4 2221.2 2457.3 3227.5 3368.9 3586.9 True False 2789.6334883425743 2279.3928354519476 1947.4112180127768 2047.7138238356324 2432.7304484189635 2600.2235872670044 2624.7632883214974 2805.6298001656346 2496.4764032584258 2607.8631501973364 2696.1737365961353 1.03466384620467 0.8454176392689126 0.7222869919619289 0.759488825234545 0.9022899434849612 0.9644124753435711 0.9735141518124896 1.0405968139529782 0.9259330618694389 0.9672459585225806 1.0 11.39669774885612 -7.050634248004018 3.7964597697370035 0.9708138658203889 0.8318253373692547 0.40309820347186287 0.0779247128732008 0.18263617020456854 5.380414949448105 0.01181416762981639 0.021687903428216592 8.899502963181218e-08 7.050634248004018 -0.13898852845113419 RIQVEQTRDEDLDTDS(ph)LD ddPTM_A549_PD325901_60min_R1 1 RIQVEQTRDEDLDTDSLD 18 2 V9GYT7 V9GYT7 PSIP1 1 RIQVEQTRDEDLDTDS(1)LD 88.98299999999999 2.1961e-06 10924000.0 2155.2 2603.8 1918.2 2235.5 2448.5 2536.5 2247.7 1996.4 2439.8 2394.8 2666.0 True False 2373.994317425616 2823.231364036894 2048.380587073649 2373.581757811134 2276.525806866438 2515.8435849738953 2333.237453488633 1956.5802358544966 2337.263690633045 2243.5919193008754 2338.0989011664237 1.015352394306881 1.2074901376620333 0.876088084234486 1.0151759434243817 0.9736653166086052 1.0760210287592191 0.9979207690165008 0.8368252664069957 0.9996427822052514 0.9595795619174189 1.0 11.191120241565248 -7.987016369096491 24.763230846298846 0.9842569493413015 1.0265725025872243 0.10423661792179784 0.08723348626686944 549.4680798337055 1047976.5597387888 0.013271763470481595 0.018331151065042673 1.0303472846454556e-08 7.987016369096491 0.04231555324592284 RIS(ph)EMEEELK ddPTM_A549_MK2206_60min_R1 6 RISEMEEELK 10 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RIS(1)EMEEELK;RIS(1)EMEEELK;RIS(1)EMEEELK;RIS(1)EMEEELK;RIS(1)EMEEELK;RIS(1)EMEEELK 87.21600000000001 0.00058621 30343300.0 7049.87 8811.529999999999 8626.73 7446.9800000000005 10768.220000000001 9126.130000000001 7990.67 8513.02 13106.48 13401.32 14903.400000000001 True False 8239.715703226771 9259.99923991236 9850.130033166824 9271.490434307641 9184.229102574784 10091.851019165188 9442.471306092177 9719.766655030338 10137.883206747794 10373.952504379045 11202.474467084914 0.7355263988716677 0.826603021245 0.8792816321169448 0.8276287941158995 0.8198393247456056 0.9008590958021857 0.8428915713073951 0.8676446158024226 0.9049682047064602 0.9260411648211982 1.0 13.451529817822777 -14.999999999783935 0.05712906469293658 1.639025831133659 0.5695595088483641 0.6449390941409912 0.039025786619356996 84.58365199676665 0.36637811056199904 7.67008265817287 1.4739510662883268 1.000000000497509e-15 14.999999999783935 -1.0694663222852947 RIS(ph)EMEEELK ddPTM_A549_PD325901_60min_R1 4 RISEMEEELK 10 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RIS(1)EMEEELK;RIS(1)EMEEELK;RIS(1)EMEEELK;RIS(1)EMEEELK 193.06 2.6217e-15 85183000.0 13774.1 15032.5 15995.1 15342.599999999999 16876.0 15152.199999999999 15774.2 16395.9 15642.0 17057.199999999997 18695.1 True False 15172.436492043505 16299.34153156334 17080.62367234998 16290.277556427245 15690.687979039414 15028.805506895898 16374.495812973453 16068.87091216528 14984.62113652025 15980.205481000028 16395.721218003146 0.9253900020807608 0.9941216561834452 1.0417732434724971 0.9935688305397558 0.9569989493240726 0.9166297296146801 0.9987054302310052 0.980064902208817 0.9139348575936109 0.9746570625666126 1.0 14.00103174421128 -6.759252924307867 23.99281663979763 0.959681239459996 0.992889731140387 0.09468696138872412 0.03654313509284203 59.762880994119755 655772.4321050096 0.0060630518286636055 0.012149138911796826 1.7407927756795476e-07 6.759252924307867 0.03320849168039108 RIS(ph)FSASHR ddPTM_A549_MK2206_60min_R1 1 RISFSASHR 9 1 E9PKY8;E9PJM0;Q03393 E9PKY8 PTS 6-pyruvoyl tetrahydrobiopterin synthase 1 RIS(0.999)FS(0.001)ASHR 53.769 0.0088523 7112100.0 729.82 1385.4 1156.7 890.21 1289.1 1180.3 1181.3 1051.8 1550.5 1620.9 1551.5 True False 852.9957736141184 1455.9109424781598 1320.7374531675468 1108.311489963045 1099.475097660444 1305.1985625802693 1395.9269190051264 1200.8958710024065 1199.3142256397175 1254.737564236059 1166.2197307783617 0.7314194324639058 1.2484019126536743 1.1324945190955193 0.9503453429169241 0.9427683897327214 1.119170365698709 1.1969673314251448 1.0297337965641356 1.0283775809891913 1.075901505626747 1.0 10.187623921089465 -9.001918233932468 2.1158478159326615 1.010705432164516 1.0543898155656721 0.0 0.13510054415950595 1.1639295617033762 10.48886540999296 0.024781288865901308 0.02471798790385783 9.955928432854707e-10 9.001918233932468 0.04368438340115621 RIS(ph)FSASHR ddPTM_A549_PD325901_60min_R1 2 RISFSASHR 9 1 E9PKY8;E9PJM0;Q03393 E9PKY8 PTS 6-pyruvoyl tetrahydrobiopterin synthase 1 RIS(0.989)FS(0.01)AS(0.001)HR;RIS(0.991)FS(0.009)ASHR 56.938 0.0060779 23792100.0 3484.9 4262.9 4618.5 4690.8 4499.299999999999 3999.3999999999996 3823.1 4543.0 4915.3 5506.2 5948.200000000001 True False 3838.684482552213 4622.1495436488485 4931.939183296656 4980.540062420253 4183.284689742356 3966.830212396842 3968.5901625805905 4452.386301085445 4708.727034416186 5158.537592306032 5216.609108746485 0.7358581796201752 0.8860448324370463 0.9454300831219011 0.9547466483677253 0.8019164561761789 0.7604231273042507 0.7607605016689117 0.8535019987639677 0.902641339662818 0.9888679570905387 1.0 12.348896617970063 -9.538955097867433 0.942649739182076 0.9821436979492704 0.8418156670486351 0.41651955993019696 0.06986815723883459 0.37491557061094954 0.7016090389537066 0.0229854761864948 0.015852534777472387 2.890978768045314e-10 9.538955097867433 -0.14032803090063528 RIS(ph)GLIYEETR ddPTM_A549_MK2206_60min_R1 2 RISGLIYEETR 11 1 P62805 P62805 HIST1H4A Histone H4 1 RIS(1)GLIYEETR;RIS(1)GLIYEETR 136.39 1.6118e-08 172868000.0 1297.3600000000001 1759.63 1453.2199999999998 1191.6100000000001 1750.74 1444.6 1494.79 1480.48 2089.9700000000003 2056.84 1993.17 True False 1516.322650593314 1849.1876510125928 1659.3084479053707 1483.5545034934053 1493.208465191255 1597.4666131521283 1766.373994124838 1690.342573779848 1616.5951319962855 1592.1984154625802 1498.2108803064818 1.0120889325560944 1.2342639312793626 1.1075266304072855 0.9902174139797474 0.9966610740977909 1.0662495074293827 1.178988897586633 1.1282407543549962 1.0790170818046565 1.062733181551099 1.0 10.549024988939424 -10.260674247150892 0.8867104668259461 1.004574913714053 1.0897067578975788 0.06105846191370612 0.07341048355051659 0.7606925880705111 1.163610224730316 0.03621265645789681 0.014235285812495299 5.486883672992863e-11 10.260674247150892 0.08513184418352582 RIS(ph)GLIYEETR ddPTM_A549_PD325901_60min_R1 4 RISGLIYEETR 11 1 P62805 P62805 HIST1H4A Histone H4 1 RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR 155.17 3.0726e-13 324532000.0 12697.7 12896.68 12179.74 13690.64 14668.6 14215.220000000001 13851.0 14670.32 15610.8 16809.27 17879.199999999997 True False 13986.761156447312 13983.5284845024 13006.330399126466 14536.279739100628 13638.328139922824 14099.455961361176 14378.107384558034 14377.708958956593 14954.732364019334 15747.929823512039 15680.171745586913 0.8920030586006686 0.8917968955561968 0.8294762716988108 0.9270485027175658 0.8697818085928329 0.8991901485600361 0.9169610905954945 0.9169356810777988 0.9537352400638246 1.0043212586586747 1.0 13.93665374098915 -8.80193777448992 0.47789356483365525 0.9979495184668721 0.8752075187934636 0.7950255281795475 0.022601296575848688 0.23812338897524424 0.13144483738220658 0.009139925796540233 0.00843405400582739 1.5778373252977976e-09 8.80193777448992 -0.12274199967340849 RIS(ph)HSLYSGIEGLDESPSR ddPTM_A549_MK2206_60min_R1 2 RISHSLYSGIEGLDESPSR 19 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RIS(0.933)HS(0.067)LYSGIEGLDESPSR;RIS(0.92)HS(0.079)LYSGIEGLDESPSR 145.2 4.6065e-21 12515600.0 2730.6000000000004 2908.2 2809.9 2439.0 4151.4 2426.99 2368.8999999999996 2888.0 4297.299999999999 4126.700000000001 4144.0 True False 3191.4585232395802 3056.2149580734704 3208.386072149643 3036.5551094908724 3540.7345593263276 2683.8124708944247 2799.298466461731 3297.382844129065 3323.9684113779795 3194.4756038823766 3114.930431418326 1.0245681544118495 0.98115030989051 1.0300024808864716 0.9748388210738412 1.1366977970400833 0.8615962795908737 0.8986712634821582 1.0585735112638335 1.0671083944126714 1.0255367412580805 1.0 11.6049842272473 RIS(ph)HSLYSGIEGLDESPSR ddPTM_A549_PD325901_60min_R1 2 RISHSLYSGIEGLDESPSR 19 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RIS(0.676)HS(0.32)LYS(0.004)GIEGLDESPSR;RIS(0.985)HS(0.015)LYSGIEGLDESPSR 171.3 1.7406e-34 25082000.0 3707.4 4648.5 4058.1000000000004 5378.4 6009.1 4892.0 4048.8 5582.1 5194.200000000001 5559.7 5472.4 True False 4083.772518756369 5040.245408912169 4333.5070693376965 5710.6115527673455 5587.041546269602 4852.161173937432 4202.8792995883705 5470.760636427263 4975.905837317063 5208.659593175665 4799.329492401776 0.8509048035192696 1.0501978280282291 0.9029401036537369 1.1898769529802646 1.1641296050031402 1.0110081380366358 0.8757221829095717 1.139901030985367 1.036791877947709 1.0852890182726427 1.0 12.22861714767163 -4.568255612461124 1.5689028583348479 1.0319819065367482 4.565872811436262e-08 0.23857102172008737 0.09572343696686252 9.750680488961073 4.488731864486193 0.012997544176556667 26.445741994068424 2.702367365094383e-05 4.568255612461124 -1.03198186087802 RIS(ph)LDQQ ddPTM_A549_MK2206_60min_R1 2 RISLDQQ 7 1 Q96PM5-8;Q96PM5-7;Q96PM5-6;Q96PM5-2;Q96PM5 Q96PM5-8 RCHY1 RING finger and CHY zinc finger domain-containing protein 1 1 RIS(1)LDQQ;RIS(1)LDQQ 48.283 0.046155 15580500.0 2426.74 2044.9299999999998 1808.29 1727.6599999999999 2532.7 1832.35 2050.33 1976.62 2932.1000000000004 2753.2 2956.3 True False 2836.3143839033232 2149.0082023977643 2064.732713052947 2150.936777557603 2160.1431850474023 2026.2480607845102 2422.848421098602 2256.8119381448732 2267.9840316015598 2131.250207819555 2222.1691202707507 1.2763719727856468 0.9670768002283857 0.9291519237749909 0.9679446797890573 0.972087662159669 0.9118334164132524 1.090307843357755 1.0155896405715068 1.0206172027650293 0.9590855117093346 1.0 11.11775290323031 -5.257658669509078 24.875162507836247 0.9971875097526112 1.2763720878321003 0.7504006924179848 0.04798164853700102 131.0462177446904 862178.9933493059 0.0064800979447306875 0.06711849240806982 5.525115109590258e-06 5.257658669509078 0.27918457807948915 RIS(ph)LDQQ ddPTM_A549_PD325901_60min_R1 2 RISLDQQ 7 1 Q96PM5-8;Q96PM5-7;Q96PM5-6;Q96PM5-2;Q96PM5 Q96PM5-8 RCHY1 RING finger and CHY zinc finger domain-containing protein 1 1 RIS(1)LDQQ;RIS(1)LDQQ 51.949 0.038993 21612000.0 5541.700000000001 5166.700000000001 5179.3 5347.2 6570.7 6359.6 5983.3 6063.7 5736.0 6612.3 7905.1 True False 6104.289304416084 5602.1159415352295 5530.798443661011 5677.484399627692 6109.1966996844185 6307.809526118659 6210.997755687389 5942.75474661937 5494.935867477312 6194.798249537819 6932.822814557654 0.8804911747633587 0.808056990836664 0.7977700558057463 0.8189282420006492 0.8811990242785707 0.9098472144525919 0.8958829501087833 0.8571912055996408 0.7925971879649018 0.8935463108230433 1.0 12.759227174018223 -10.909637843874794 1.1025989075413023 1.0020561097197163 0.8452633858755525 0.2956189353202012 0.04910564552717913 0.27046338297051825 0.571319835097 0.033260721544098266 0.007485284636742267 1.2312951140241501e-11 10.909637843874794 -0.15679272384416376 RIS(ph)LSDMPR ddPTM_A549_MK2206_60min_R1 4 RISLSDMPR 9 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 RIS(0.992)LS(0.008)DMPR;RIS(0.999)LS(0.001)DMPR;RIS(0.998)LS(0.002)DMPR;RIS(1)LSDMPR 106.49 0.00021947 36405700.0 1955.72 2140.54 1802.8 1425.5600000000002 2807.02 1966.1499999999999 1546.15 1470.27 2473.2 2485.68 2205.1400000000003 True False 2285.797723236691 2249.4843430144388 2058.464148500435 1774.8222639958196 2394.111076436909 2174.2066879752565 1827.0654413102295 1678.6852750130347 1913.0241488888428 1924.1631616202646 1657.542879232096 1.379027807893363 1.3571198496274053 1.2418768614022686 1.070754962802565 1.4443735401560467 1.3117046413800888 1.1022734097573812 1.012755263254929 1.1541325252322314 1.1608527210540025 1.0 10.694830476782961 -2.0000000000433262 0.08311613013609945 0.8225247476155813 2.300810660680611 0.38554423470536736 0.11470199031725593 91.51120548503444 0.5361731969067502 1.3504160207865774 15.512283182929917 0.009999999999002376 2.0000000000433262 1.4782859130650297 RIS(ph)LSDMPR ddPTM_A549_PD325901_60min_R1 2 RISLSDMPR 9 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 RIS(1)LSDMPR;RIS(0.999)LS(0.001)DMPR 128.85 2.1261999999999997e-05 13880200.0 338.28 545.63 453.56 608.54 559.1800000000001 591.29 428.99 430.27 507.54999999999995 937.99 928.71 True False 372.62193657142615 591.6121549886515 484.34130907784606 646.1281337053848 519.9051258662751 586.4747302815745 445.31544920233546 421.6879273097147 486.2194385526694 878.7651513216256 814.4845575777456 0.4574941699073994 0.7263638696209165 0.5946599043182152 0.7932969725380085 0.6383241045262521 0.7200562918291956 0.5467451102163203 0.5177359391119739 0.5969658160231699 1.078921807842556 1.0 9.669743535649884 -10.644218567460296 0.8758906553609929 1.0044209344855446 0.6269744829025319 0.7203482711324806 0.09884819589187938 0.27614705551427826 0.371039692025382 0.06712540462816675 0.01724928839123115 2.2687227840090204e-11 10.644218567460296 -0.3774464515830127 RIS(ph)LTK ddPTM_A549_PD325901_60min_R1 1 RISLTK 6 1 A0A0A0MRX4;Q3MIN7;Q3MIN7-2 A0A0A0MRX4 RGL3 Ral guanine nucleotide dissociation stimulator-like 3 1 RIS(0.999)LT(0.001)K 71.37899999999999 0.020738 5605100.0 1391.7 1394.9 1458.9 1275.8 1292.1 1239.6 1524.5 1393.3 1454.0 1237.6 1450.6 True False 1532.98435948461 1512.4531184019752 1557.9097270783777 1354.6032684479746 1201.347353503012 1229.5051085880693 1582.515681738409 1365.5095384772949 1392.893436421202 1159.457724789863 1272.1853961110335 1.2050007523831177 1.1888621918042923 1.2245933115100835 1.064784482347373 0.9443178306993875 0.9664512046330399 1.2439347964345684 1.073357344496758 1.0948824288340073 0.9113905318629111 1.0 10.313093215158396 -6.294251452669158 6.783918707492324 1.050076307374943 1.2045009877560358 0.4295003227345835 0.0857445539047582 0.14414997414985373 22.796607139242557 0.011178621312713015 0.026606337946580332 5.078653078904917e-07 6.294251452669158 0.1544246803810927 RIS(ph)MEDLNK ddPTM_A549_MK2206_60min_R1 3 RISMEDLNK 9 1 Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6 Q00537 CDK17 Cyclin-dependent kinase 17 1 RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK 93.766 0.00040455 27889700.0 4076.07 4502.33 5368.4 4562.63 6178.27 4946.370000000001 4202.61 4901.799999999999 6820.3 6602.200000000001 6557.3 True False 4764.010965656324 4731.479365993719 6129.719844025815 5680.474554824242 5269.454667304783 5469.7915902653285 4966.169837535031 5596.645161132911 5275.512939781083 5110.75843457296 4928.941437726681 0.9665383583566319 0.9599382394317844 1.2436179089303514 1.1524735334336171 1.0690844543154387 1.1097294742434791 1.007553021328961 1.135465947778472 1.0703135767452427 1.0368876358429886 1.0 12.267062124668348 -10.27029722072301 0.6991941391227029 0.9994991470237559 1.0835743204241721 0.0717044236101878 0.07981808529679389 1.203799167313394 1.090915940578129 0.05339875769861063 0.01692253518839013 5.3666439043053116e-11 10.27029722072301 0.08407517340041626 RIS(ph)MEDLNK ddPTM_A549_PD325901_60min_R1 5 RISMEDLNK 9 1 Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6 Q00537 CDK17 Cyclin-dependent kinase 17 1 RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK 142.76 1.5467e-05 66387000.0 10443.5 10949.400000000001 10642.7 11370.4 13565.7 11764.900000000001 11621.3 12473.7 11893.7 12058.4 12678.699999999999 True False 11503.716431901641 11872.144364922644 11364.977621754106 12072.723783947995 12612.892031124373 11669.090555040164 12063.554930919368 12224.902268071653 11393.849150455884 11297.03056610058 11119.300276901255 1.034571973543961 1.0677060668633362 1.022094676709398 1.0857449194916824 1.1343242575547527 1.0494446830688635 1.0849203304617707 1.0994308961569397 1.0246912005897497 1.0159839454617963 1.0 13.440778383545515 -8.915237684738933 5.041055731775036 1.01058391377993 1.0725476279481738 0.44368609218628396 0.029534358392902176 0.13535896533704667 5.75232482840813 0.00536709588766764 0.005647339358103118 1.2155205771229788e-09 8.915237684738933 0.061963714168243866 RIS(ph)MEDLNKR ddPTM_A549_PD325901_60min_R1 1 RISMEDLNKR 10 2 Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6 Q00537 CDK17 Cyclin-dependent kinase 17 1 RIS(1)MEDLNKR 41.54 0.017997 5380100.0 281.65 320.29 302.95 420.2 413.71 279.74 248.77 239.76 367.81 392.7 329.93 True False 310.2429006602287 347.2819623578527 323.5100087863422 446.1547996565598 384.65243682201907 277.46189018750135 258.23707848216725 234.97779871191867 352.3522247937294 367.9048549813989 289.35070159858896 1.0722037269867177 1.2002112330787804 1.118055034942137 1.541917117158065 1.329364106245163 0.9589121044275858 0.8924708910518383 0.8120865006157792 1.2177341297155082 1.2714842333155518 1.0 8.176675332039379 -7.257256315040138 24.862946823291715 1.0544620875765423 1.2580798372124713 0.3009823943887677 0.16895133281012684 392.5923453058859 2333453.143249439 0.0261574358638658 0.04428784220266478 5.530236254221514e-08 7.257256315040138 0.20361774963592905 RIS(ph)MLYMAK ddPTM_A549_MK2206_60min_R1 2 RISMLYMAK 9 1 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-2 A0MZ66 KIAA1598 Shootin-1 1 RIS(0.999)MLY(0.001)MAK;RIS(0.999)MLY(0.001)MAK 55.426 0.0074016 2040300.0 1025.01 628.0899999999999 753.62 831.1800000000001 1312.1 901.87 886.1099999999999 535.01 1041.97 1023.5699999999999 853.25 True False 1198.0066289115225 660.0570982107032 860.4946480990121 1034.819137313088 1119.0918281283602 997.3052847871448 1047.1047170063753 610.8493058994083 805.9654586841777 792.3448260997617 641.3644764979931 1.867902998701973 1.029145084265933 1.3416624706087923 1.6134650034929492 1.7448609474582617 1.5549743107580196 1.6326203826002699 0.9524214830774458 1.2566418755914674 1.235404914263662 1.0 9.32500063865961 -8.257071077301564 24.90601705522238 1.111920454286805 1.5245385206859603 0.46421022654200195 0.22155940450642128 255.30983601873936 1455658.189798006 0.03633772111245068 0.04606948941060904 5.5325955449781666e-09 8.257071077301564 0.4126180663991552 RIS(ph)MLYMAK ddPTM_A549_PD325901_60min_R1 3 RISMLYMAK 9 1 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-2 A0MZ66 KIAA1598 Shootin-1 1 RIS(1)MLYMAK;RIS(1)MLYMAK;RIS(0.999)MLY(0.001)MAK 74.76 0.00088957 7412000.0 3017.6499999999996 3282.6099999999997 3156.3100000000004 3005.9700000000003 3820.02 3164.81 3032.21 3521.37 3708.02 3542.49 3274.46 True False 3323.9996065234823 3559.247065020795 3370.5161770339005 3191.641939846806 3551.714973553577 3139.03683664941 3147.6024108389774 3451.133512888674 3552.1848143868947 3318.816576834876 2871.722178512158 1.1574934481460355 1.2394120474651362 1.1736915925412286 1.111403451116709 1.2367891992232076 1.0930851389934064 1.0960678697929453 1.2017644111648398 1.2369528086548 1.155688597479286 1.0 11.487700468687198 -10.909192211641887 1.1315912628492117 0.9988398381933804 1.1756758071836702 0.0814114977026098 0.06857090018715994 0.28404918616591207 0.6391225953787624 0.039764727538433485 0.009197250559165648 1.2325592019296961e-11 10.909192211641887 0.17683596899028975 RIS(ph)QSQPVR ddPTM_A549_MK2206_60min_R1 10 RISQSQPVR 9 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RIS(1)QSQPVR;RIS(0.999)QS(0.001)QPVR;RIS(1)QSQPVR;RIS(1)QSQPVR;RIS(1)QSQPVR;RIS(0.999)QS(0.001)QPVR;RIS(1)QSQPVR;RIS(0.973)QS(0.027)QPVR;RIS(0.995)QS(0.005)QPVR;RIS(0.994)QS(0.006)QPVR 170.4 7.6072e-08 852816400.0 14766.740000000002 15778.029999999997 14164.210000000001 13781.68 15574.22 11973.95 11409.03 11108.140000000001 17462.440000000002 22671.300000000007 22694.0 True False 17259.0046998692 16581.064333585018 16172.907963629548 17158.192218683133 13283.272869044486 13241.025441335276 13481.903070123628 12682.752862252022 13507.22522178654 17549.83758409832 17058.453477463194 1.0117567060033295 0.9720145120711629 0.9480875851375633 1.0058468806302816 0.77869150838285 0.7762148813096498 0.7903356003482536 0.743487847770483 0.7918200345436728 1.0288059000943033 1.0 14.058199237135891 -6.742708281296136 24.994426203148375 0.8620959271165511 0.9809442535488607 0.35175208726169716 0.08945623453733259 294.22360331281385 392604.288327996 0.015014459937798388 0.031212280290594425 1.808388425553719e-07 6.742708281296136 0.11884832643230958 RIS(ph)QSQPVR ddPTM_A549_PD325901_60min_R1 6 RISQSQPVR 9 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RIS(1)QSQPVR;RIS(1)QSQPVR;RIS(1)QSQPVR;RIS(0.996)QS(0.004)QPVR;RIS(1)QSQPVR;RIS(0.968)QS(0.032)QPVR 188.6 1.9767e-11 810453500.0 16094.92 16952.46 17307.7 16297.030000000002 19644.2 17376.38 18379.0 18560.600000000002 18591.4 19795.0 21710.899999999998 True False 17728.864429946127 18381.103298863534 18482.304601654974 17303.660529859444 18264.459160810977 17234.87252240043 19078.4229023747 18190.39427249098 17810.068111335047 18545.140321764167 19040.596936734466 0.9311086458504012 0.9653638150073651 0.9706788428464449 0.9087772083697648 0.9592377393155092 0.9051645061163862 1.0019865955760692 0.9553478986468531 0.9353734113752812 0.9739789347667757 1.0 14.216791088456167 -10.875524898807457 0.9077472940555945 1.0030042411798636 0.9479489046230903 0.20955124040589312 0.027520794526189617 0.5909803139912052 0.7832834777801515 0.02315992222464144 0.0044875055519998566 1.3319106795233875e-11 10.875524898807457 -0.055055336556773304 RIS(ph)QVSSGETEYNPTEAR ddPTM_A549_MK2206_60min_R1 1 RISQVSSGETEYNPTEAR 18 1 H7C3Y7;H0Y764;A0A494C1V1;Q6ZNJ1-2;Q6ZNJ1-3;Q6ZNJ1 H7C3Y7 NBEAL2 Neurobeachin-like protein 2 1 RIS(0.999)QVSS(0.001)GETEYNPTEAR 97.28399999999999 1.4127e-06 2986700.0 846.23 1035.9 1017.8 825.36 1220.5 1147.7 918.49 597.35 1395.5 1015.7 1641.6 True False 989.0529356628693 1088.6228853133582 1162.1393445439003 1027.5732370518178 1040.966066786573 1269.1488522183977 1085.3677438728666 682.0261918076515 1079.4214781555797 786.2526645657139 1233.945414144865 0.8015370245111626 0.8822293699821263 0.941807742240586 0.8327542087945075 0.8436078734552221 1.0285291696617949 0.8795913753000459 0.5527199047782041 0.8747724703070664 0.6371859367138973 1.0 10.269062860280437 -10.15359452750503 1.1463299474804203 0.9846764681679272 0.8531652560219416 0.0 0.1523008577250363 0.5466483173128582 1.4350536869713746 0.04052271896115344 0.020761679858279238 7.021105073985728e-11 10.15359452750503 -0.1315112121459856 RIS(ph)SADPDKLQTEPLS(ph)TSFEISR ddPTM_A549_PD325901_60min_R1 1 RISSADPDKLQTEPLSTSFEISR 23 2 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5;Q96Q89-4 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 2 RIS(0.82)S(0.18)ADPDKLQT(0.026)EPLS(0.372)T(0.339)S(0.256)FEIS(0.007)R 72.707 0.00013973 4782400.0 3824.3 3515.9 3215.0 3435.7 4242.9 3874.8 3621.5 3738.2 3173.6 3922.0 4114.9 True False 4212.540120699138 3812.1972320521245 3433.1892333655383 3647.915385959168 3944.893341210379 3843.2449134858452 3759.3181642608392 3663.6386684388294 3040.2246284912826 3674.3642506672945 3608.793386500268 1.1672987809325297 1.0563633945663797 0.9513399260285647 1.0108407423947425 1.0931336096899837 1.0649667359352328 1.041710555756296 1.0151976785769243 0.8424490689503366 1.0181697473765923 1.0 11.817300831941498 -8.572916418827655 8.109558493894431 0.9255865542238045 1.0497146639825796 0.2844112245530548 0.06624269704983214 0.19910676245972198 28.686634596952103 0.012534261402534415 0.014226767938608274 2.673520885632828e-09 8.572916418827655 0.12412810975877508 RIS(ph)SADPDKLQTEPLST(ph)SFEISR ddPTM_A549_PD325901_60min_R1 1 RISSADPDKLQTEPLSTSFEISR 23 2 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5;Q96Q89-4 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 2 RIS(0.738)S(0.262)ADPDKLQTEPLS(0.06)T(0.578)S(0.36)FEIS(0.002)R 98.289 9.913299999999999e-08 7675800.0 1155.1 1082.8 1067.9 1171.4 1286.5 945.42 1287.9 1104.2 1019.2 1347.7 1478.4 True False 1272.3649016603226 1174.051356086931 1140.3741158043736 1243.7547175575767 1196.1406781840608 937.7208129730014 1336.9117392659214 1082.1758647718573 976.3665683634729 1262.6059920000798 1296.5661723497524 0.9813343343320688 0.9055082425598154 0.8795340647656157 0.9592682148289693 0.922545029858606 0.7232340569811262 1.0311172447473709 0.8346476160261393 0.7530402914908806 0.9738075995858145 1.0 10.34048012300497 -2.000004597972995 0.6960197197485051 0.8818163308016824 12.385505438454823 0.04468189044670612 0.09340879747219082 635.656900483784 3.183086088406934 0.017180839378966514 11389.880917206425 0.009999894128319687 2.000004597972995 11.503689107653141 RIS(ph)SADPDKLQTEPLSTSFEISR ddPTM_A549_MK2206_60min_R1 2 RISSADPDKLQTEPLSTSFEISR 23 2 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5;Q96Q89-4 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 RIS(0.826)S(0.174)ADPDKLQTEPLSTSFEISR;RIS(0.495)S(0.495)ADPDKLQT(0.009)EPLSTSFEISR 107.45 4.9078e-11 8593300.0 1463.81 1887.22 1853.8700000000001 1644.71 2545.9 1596.19 1580.41 1586.0900000000001 2705.1000000000004 2493.4 2205.8 True False 1710.8653412815245 1983.27143703164 2116.7766424342703 2047.6640238338384 2171.4014825333356 1765.09776633483 1867.5500398416068 1810.923114696907 2092.3991691570463 1930.1392082584916 1658.038983017022 1.0318607456191276 1.1961548898101384 1.2766748334122484 1.23499148379964 1.3096202832228845 1.0645695212322452 1.1263607544638978 1.0922078028597928 1.2619722398502649 1.1641096669188966 1.0 10.69526221184809 -7.277154412591194 24.83683864887889 1.120489233220395 1.214207114467666 0.20677157070898744 0.08914397818887011 1156.0613563810957 1827096.306654054 0.016860047987670608 0.027007762691227347 5.2825739745136405e-08 7.277154412591194 0.09371788124727098 RIS(ph)SADPDKLQTEPLSTSFEISR ddPTM_A549_PD325901_60min_R1 2 RISSADPDKLQTEPLSTSFEISR 23 2 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5;Q96Q89-4 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 RIS(0.5)S(0.5)ADPDKLQTEPLSTSFEISR;RIS(0.736)S(0.264)ADPDKLQTEPLSTSFEISR 111.64 1.5999e-11 8032800.0 2406.6000000000004 2463.0 2625.6 2490.2 2692.3 2586.9 2457.3 2698.8 2541.7 2680.0 2877.2 True False 2650.9162603547193 2670.565653899252 2803.7890050154147 2644.013998345466 2503.2021359307773 2565.833144083963 2550.813896186155 2644.970316832357 2434.881187999842 2510.7843426283403 2523.3226400735325 1.0505657176988943 1.0583528287216686 1.1111496248984272 1.047830331466616 0.9920261864958463 1.016847034673771 1.0108948636516104 1.0482093232260143 0.9649503988633363 0.995031036758412 1.0 11.301108970355806 -6.977908103586922 0.721182031881452 0.9876180309785838 1.0764304597017327 0.4899260481695882 0.027819370101122662 0.43059275031689453 0.41083412437693484 0.005558611358372066 0.01947267697308442 1.0521844917828394e-07 6.977908103586922 0.08881242872314887 RIS(ph)SSSVQPCSEEVSTPQDSLAQCK ddPTM_A549_MK2206_60min_R1 2 RISSSSVQPCSEEVSTPQDSLAQCK 25 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 RIS(0.527)S(0.119)S(0.177)S(0.177)VQPCSEEVSTPQDSLAQCK;RIS(0.649)S(0.184)S(0.134)S(0.034)VQPCSEEVSTPQDSLAQCK 171.87 3.3989e-48 22588000.0 2974.7 3626.5 2989.5 2484.1 3551.4 2795.3 2570.6000000000004 2822.8 4454.7 3256.8 4174.1 True False 3476.756635567559 3811.073359966109 3413.4560527746 3092.7046115154853 3028.993764511133 3091.0967906300334 3037.6447456146407 3222.9405444624385 3445.717562694132 2521.086618054165 3137.555770700587 1.1081099077296184 1.2146631449726013 1.0879347817974905 0.9857050639214338 0.9653991788119792 0.985192620158532 0.9681564146145402 1.0272137867824374 1.0982171519853927 0.8035193004684758 1.0 11.615425388155158 -5.987628948614001 5.78343773939325 1.0271511645904576 1.1604889274867964 0.352896780541592 0.08106555174323395 0.10088130806961676 11.977852125389425 0.00771841076657557 0.023615298566477854 1.0288949873209246e-06 5.987628948614001 0.1333377628963388 RIS(ph)SSSVQPCSEEVSTPQDSLAQCK ddPTM_A549_PD325901_60min_R1 2 RISSSSVQPCSEEVSTPQDSLAQCK 25 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 RIS(0.738)S(0.192)S(0.05)S(0.02)VQPCSEEVSTPQDSLAQCK;RIS(0.574)S(0.138)S(0.232)S(0.056)VQPCSEEVSTPQDSLAQCK 203.75 1.2192999999999999e-68 43838000.0 2675.6 3190.5 3887.6 2605.4 3377.9 3353.4 2961.8 3331.2 2852.2 3587.9 3696.5 True False 2947.2249423273843 3459.374632060724 4151.435914037908 2766.3296407072826 3140.647957122377 3326.0910222162247 3074.512919759148 3264.756602724155 2732.331952792677 3361.3593816851553 3241.8539340441444 0.9091171293614649 1.067097624520432 1.2805746336816228 0.8533171749833728 0.9687814506819822 1.0259842330610487 0.9483810752459653 1.0070646824767457 0.8428300621749946 1.0368633041686521 1.0 11.662603374475774 -6.296831443713073 24.999845832661777 0.9380667601820035 1.0837468569055413 0.21101021218485883 0.10131092845351654 544.0839817527038 384322.9520590594 0.01422146455240978 0.03304869848859894 5.048572022950817e-07 6.296831443713073 0.14568009672353777 RIS(ph)TLTIEEGNLDIQRPK ddPTM_A549_MK2206_60min_R1 1 RISTLTIEEGNLDIQRPK 18 2 A0A0A0MT09;Q12972-2;Q12972 A0A0A0MT09 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay 1 RIS(0.857)T(0.141)LT(0.002)IEEGNLDIQRPK 71.535 0.00019689 3022500.0 366.47 465.66 408.78 535.42 533.06 426.92 594.17 452.92 657.03 671.61 709.3 True False 428.32117666872057 489.3601050053273 466.751150778793 666.5979240359172 454.64758014031196 472.09639103343955 702.1229979389449 517.1227970093271 508.21375406131176 519.8928345465976 533.1612343158824 0.8033614394683332 0.9178463727454643 0.875440899932827 1.2502745532338861 0.8527393795306328 0.8854664605148997 1.3169055676747825 0.9699182230922418 0.9532083755365642 0.9751137199869566 1.0 9.058428076928191 -6.053482611138602 24.99996431029973 1.0023173880209564 0.8696117463491532 0.1988875052253989 0.13731142166208693 412.16247382275844 192661.17655441002 0.01809242982810516 0.047868452580606013 8.841325685701715e-07 6.053482611138602 -0.1327056416718032 RIS(ph)TLTIEEGNLDIQRPK ddPTM_A549_PD325901_60min_R1 4 RISTLTIEEGNLDIQRPK 18 2 A0A0A0MT09;Q12972-2;Q12972 A0A0A0MT09 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay 1 RIS(0.843)T(0.152)LT(0.005)IEEGNLDIQRPK;RIS(0.813)T(0.094)LT(0.094)IEEGNLDIQRPK;RIS(0.952)T(0.047)LTIEEGNLDIQRPK;RIS(0.97)T(0.014)LT(0.016)IEEGNLDIQRPK 111.49 3.8143000000000005e-10 21515500.0 5106.38 5611.07 5592.030000000001 5528.969999999999 6764.98 7011.4400000000005 6355.129999999999 6606.96 6574.18 6366.76 6609.41 True False 5624.775938481728 6083.93456095188 5971.538783408118 5870.481919698066 6289.831142714032 6954.341157275525 6596.977949810571 6475.178999740148 6297.890076926784 5964.761687041942 5796.494470502018 0.970375451422553 1.0495886077201704 1.0301983058548385 1.0127641714440625 1.0851094872465714 1.1997494680044487 1.138097859556696 1.1170853405781567 1.086499798969245 1.0290291343149252 1.0 12.50096495404161 -4.580948652653738 0.897896718897708 1.0662708448105835 0.7577932994120027 0.22054218899295186 0.056924102225491865 10.010191682052593 2.5288718511690096 0.010481376677708943 4.065606032949814 2.6245288273733044e-05 4.580948652653738 -0.30847754539858085 RIS(ph)TSDILSEK ddPTM_A549_MK2206_60min_R1 3 RISTSDILSEK 11 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 RIS(0.638)T(0.201)S(0.16)DILS(0.001)EK;RIS(0.812)T(0.149)S(0.039)DILSEK;RIS(0.975)T(0.024)S(0.001)DILSEK 94.551 0.00023091 48762000.0 5115.1 5034.6 4895.2 4309.549999999999 5438.13 3918.74 4285.15 4238.85 5788.5 5866.3 5495.0 True False 5978.403827811752 5290.839635484734 5589.41296857074 5365.389943463049 4638.188280847252 4333.418465750912 5063.706287119966 4839.719968433687 4477.41399233506 4541.098755677708 4130.4398457151765 1.447401257765226 1.2809385520947192 1.3532246388648097 1.2989875519017622 1.1229284178194248 1.0491421319805205 1.2259484404240721 1.1717202402679467 1.0840041641036915 1.099422561591967 1.0 12.012079705397339 -2.0000000000000004 0.16697866020227087 0.9730830047349146 2.7973771420132296 0.7311260650575464 0.06892882988903054 17.39837185882026 0.17465097658794074 0.0849982916986793 7.971440275647966 0.00999999999999999 2.0000000000000004 1.824294137278315 RIS(ph)TSDILSEK ddPTM_A549_PD325901_60min_R1 5 RISTSDILSEK 11 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 RIS(0.918)T(0.041)S(0.041)DILSEK;RIS(0.97)T(0.03)S(0.001)DILSEK;RIS(0.764)T(0.231)S(0.005)DILSEK;RIS(0.961)T(0.031)S(0.008)DILSEK;RIS(0.564)T(0.382)S(0.055)DILSEK 131.66 3.8311000000000005e-08 50599000.0 9021.539999999999 10068.550000000001 11082.2 10422.980000000001 11589.0 11679.999999999998 10904.699999999999 11241.28 12798.1 15598.599999999999 15034.7 True False 9937.40009949327 10917.062044079292 11834.304734682297 11066.783802294924 10775.028619879577 11584.881952491656 11319.684325780805 11017.063851786437 12260.240363591596 14613.70173392626 13185.527212815765 0.753659670872663 0.8279579472156697 0.8975223018143607 0.8393129545505382 0.8171860287396557 0.8786058961094593 0.8584931146915808 0.8355421572433088 0.9298255705448903 1.1083137972459964 1.0 13.686667636918662 -9.147858879448501 0.45707795642031773 1.004127705047005 0.8237248744383888 0.718949718248151 0.049429734937555946 0.31097412951865144 0.15861542195367204 0.020292644068746785 0.013876583697573306 7.114446544021411e-10 9.147858879448501 -0.18040283060861617 RIS(ph)YVQDENR ddPTM_A549_MK2206_60min_R1 2 RISYVQDENR 10 1 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RIS(1)YVQDENR;RIS(1)YVQDENR 126.1 3.8339e-06 15360000.0 1551.71 1309.8200000000002 1577.35 1109.0900000000001 1801.0 1616.88 1259.6399999999999 1579.06 2023.09 2414.7 2135.39 True False 1813.6007123328538 1376.484243306442 1801.0419484341921 1380.8170997889424 1536.0752857702744 1787.9771684019188 1488.5002829557402 1802.896590668436 1564.8633452108713 1869.2175929180173 1605.1137292341646 1.1298892279727513 0.8575618152385958 1.1220650073770844 0.8602612230148707 0.9569884412509324 1.1139255342703986 0.9273487951946787 1.1232204658349274 0.9749236560062958 1.1645390347572833 1.0 10.648459806800462 RIS(ph)YVQDENR ddPTM_A549_PD325901_60min_R1 2 RISYVQDENR 10 1 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RIS(1)YVQDENR;RIS(1)YVQDENR 130.1 5.2911e-07 17076800.0 2398.0 2921.1 2227.7 2621.2 3242.3999999999996 2305.1 2153.6 2094.59 2635.4 2698.7 3481.4 True False 2641.4431946857026 3167.2713486013417 2378.8851182483386 2783.1055708228787 3014.6650096727526 2286.32802985347 2235.556426495139 2052.811759275933 2524.643302850369 2528.3036214369763 3053.209870412899 0.8651364651616591 1.0373578899026086 0.7791423515628264 0.9115343159972515 0.9873756268399153 0.7488276688769776 0.7321987421037699 0.6723454483652388 0.8268816786279255 0.8280805214006015 1.0 11.576111045054315 -4.372943165160925 16.62979497356573 0.8816816094509127 0.8674119987135641 0.0 0.11707722043706448 0.0 0.0 0.016891097404221362 0.0 4.236984105839762e-05 4.372943165160925 -0.01426961073734856 RIS(ph)YVQDENRDPIR ddPTM_A549_MK2206_60min_R1 3 RISYVQDENRDPIR 14 2 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RIS(1)YVQDENRDPIR;RIS(1)YVQDENRDPIR;RIS(1)YVQDENRDPIR 149.36 4.8546e-14 111797000.0 2758.95 2598.53 1901.1999999999998 2159.13 2932.5299999999997 2480.6000000000004 2693.9300000000003 2636.87 3419.59 3691.74 4048.76 True False 3224.5933101486257 2730.784077780983 2170.818748130145 2688.1169469270303 2501.158721698999 2743.0954455109872 3183.3822102052623 3010.6543975756967 2645.0583249631236 2857.7733699752166 3043.3411519086026 1.0595569636109814 0.8972980489119327 0.7133011515218189 0.8832782171795638 0.8218463185208208 0.901343394837835 1.0460155635883392 0.9892595825767326 0.8691297468587444 0.9390249818634336 1.0 11.571440350548658 -7.528923897449005 24.906737340494253 0.9497125972657103 0.867145454474698 0.1939654474703788 0.08732727588443838 225.79737836359388 930309.0335895085 0.014310367660690906 0.021258877773304995 2.958530852183001e-08 7.528923897449005 -0.0825671427910123 RIS(ph)YVQDENRDPIR ddPTM_A549_PD325901_60min_R1 2 RISYVQDENRDPIR 14 2 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RIS(1)YVQDENRDPIR;RIS(1)YVQDENRDPIR 133.62 2.1818e-09 113969000.0 8374.3 8856.3 9459.2 10989.8 10852.8 8718.4 9530.8 9430.5 10921.2 10173.5 11905.7 True False 9224.452771166178 9602.651482187553 10101.15819479046 11668.614986353305 10090.536768127453 8647.400240976305 9893.499809453879 9242.401279415873 10462.219943496033 9531.143473779633 10441.37437645052 0.8834519708412153 0.9196731326716316 0.9674165325948485 1.117536309460439 0.9663992884773535 0.8281860154808408 0.9475285008233861 0.8851709503167695 1.0019964390025635 0.9128246081546677 1.0 13.350024002911981 -8.843631472007486 24.999477159509887 1.0009431443145411 0.9430932743736455 0.0 0.07386473343797467 44.48948286759251 13527.965066590696 0.01248517473043441 0.013291479543349388 1.4334037225321682e-09 8.843631472007486 -0.05784986994089558 RIS(ph)YVQDENRDPIRR ddPTM_A549_MK2206_60min_R1 4 RISYVQDENRDPIRR 15 3 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR 114.55 1.9213000000000001e-07 92836000.0 5438.1 5667.58 5413.58 4873.63 7926.34 6091.870000000001 6167.25 5632.44 8553.51 9518.329999999998 9049.23 True False 6355.918331219939 5956.035613808554 6181.307047392382 6067.669568785566 6760.385885959103 6736.507639943971 7287.7594948229535 6430.85561862407 6616.153642148719 7368.132642232715 6802.056444957442 0.9344112890935744 0.8756227858449973 0.9087409223095702 0.8920345807015028 0.9938738292844908 0.9903633841406794 1.071405324815494 0.945428146717519 0.9726696177379507 1.0832213319392432 1.0 12.731755262557638 -6.763784356213396 24.98501265900757 0.9907396585854497 0.9011994513880014 0.5738517033860919 0.04203164449351365 28.19255660002639 300388.3682522881 0.0044574673866292535 0.008718986502851881 1.7227237607531267e-07 6.763784356213396 -0.08954020719744826 RIS(ph)YVQDENRDPIRR ddPTM_A549_PD325901_60min_R1 3 RISYVQDENRDPIRR 15 3 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR 121.21 1.1485999999999998e-07 150643000.0 5670.12 5055.82 5922.04 6395.92 6525.01 6572.41 5208.65 6254.61 5790.57 6077.88 6718.51 True False 6245.746408278273 5481.891694801836 6323.945246519458 6790.981452211767 6066.7158076624755 6518.886472035591 5406.8680260326455 6129.856896903378 5547.2124801496 5694.121619542507 5892.1758621439 1.060006787714195 0.9303679698397902 1.073278427948764 1.1525422205814528 1.02962232452021 1.1063631881590952 0.9176352085433728 1.040338414928606 0.9414539908405274 0.9663869091427066 1.0 12.52458477539847 -7.758661033298492 24.999853429707795 0.9741007079823096 1.0564706196084124 0.3438568578176847 0.058782052566821646 68.71656163856929 618314.7914571156 0.009130036876084354 0.013211371525064002 1.7431668837631017e-08 7.758661033298492 0.08236991162610274 RISGLIYEETR ddPTM_A549_MK2206_60min_R1 2 RISGLIYEETR 11 1 P62805 P62805 HIST1H4A Histone H4 0 ; 117.93 1.6707e-05 14728800.0 1321.0100000000002 1657.72 1483.7800000000002 1547.86 1631.44 1479.8600000000001 1570.08 1610.56 2132.07 2207.4 2155.75 False True 1543.9641924063271 1742.0908673053962 1694.2023154326464 1927.0857694860758 1391.457337155499 1636.4578029484358 1855.3432125552922 1838.8618121331401 1649.1595492161707 1708.746806894118 1620.4177793267504 0.9528185953673082 1.0750874802356207 1.0455342671792653 1.1892524224751098 0.8587028326322242 1.009898696389489 1.144978311288431 1.1348072303286802 1.0177372590304223 1.0545100335816275 1.0 10.662150104227496 -8.977377014499021 24.583235671790817 1.0078251967540972 1.0534136834790833 0.01032442988820148 0.08850215261910559 320.93554120014 348748.3193109596 0.015186888304312902 0.015623142349371925 1.0534719719120774e-09 8.977377014499021 0.045588486724986055 RISGLIYEETR ddPTM_A549_PD325901_60min_R1 2 RISGLIYEETR 11 1 P62805 P62805 HIST1H4A Histone H4 0 ; 151.78 5.9813e-12 21246100.0 1594.31 1548.61 1765.8400000000001 1571.33 1922.1599999999999 1564.3899999999999 1938.3000000000002 1764.54 1487.6 1746.48 1980.87 False True 1756.1631775310098 1679.1167995472672 1885.6805212585402 1668.3874853506468 1787.1541126920129 1551.6501265118518 2012.063067178458 1729.3448654451481 1425.081345268349 1636.2069547438596 1737.2355477695166 1.0108952581506836 0.9665452688342294 1.0854489615294922 0.9603691839559317 1.0287344827744216 0.8931719872437892 1.1581981900852765 0.9954579087824333 0.8203155565738044 0.9418451958599567 1.0 10.762577663672962 -8.548515977253675 24.71486281978416 0.9147667639328373 1.0142148672968367 0.22799293704366408 0.07554013748542725 219.1539008845811 211268.10695223548 0.014473374936103116 0.01641155244744427 2.828030068774677e-09 8.548515977253675 0.09944810336399945 RISHEGS(ph)PVKPVAIR ddPTM_A549_MK2206_60min_R1 2 RISHEGSPVKPVAIR 15 2 Q96II8-3;Q96II8;Q96II8-2 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 RIS(0.031)HEGS(0.969)PVKPVAIR;RIS(0.039)HEGS(0.961)PVKPVAIR 69.737 0.00054572 7306600.0 507.56 912.1600000000001 999.1600000000001 753.27 1236.4099999999999 664.51 634.46 801.02 1181.77 1102.17 1326.78 True False 593.2237193494034 958.5850478496307 1140.8559122563206 937.8211838155759 1054.5357268624234 734.8280071339617 749.7331694167373 914.5670380208667 914.1009818989036 853.1890315096904 997.303908734847 0.5948274283833411 0.9611764673274629 1.1439400791114716 0.9403564706823125 1.0573865374699867 0.7368145263424715 0.7517599829402339 0.9170394600990402 0.9165721440503602 0.8554955255234316 1.0 9.961889394311655 -10.109842974583062 0.908851270401323 0.9924335836381211 0.8996008326122936 0.0 0.15085895876746439 1.2658688195387684 2.087815193388319 0.0623809020039656 0.02849773113080652 7.765278306844958e-11 10.109842974583062 -0.09283275102582744 RISHEGS(ph)PVKPVAIR ddPTM_A549_PD325901_60min_R1 2 RISHEGSPVKPVAIR 15 2 Q96II8-3;Q96II8;Q96II8-2 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 RIS(0.055)HEGS(0.945)PVKPVAIR;RIS(0.031)HEGS(0.969)PVKPVAIR 69.737 0.00054572 10129800.0 1302.2 1263.77 1346.03 1502.08 1065.24 1461.4099999999999 991.51 1434.69 1466.63 1439.28 1625.96 True False 1434.3983853710272 1370.2723331011998 1437.379690135931 1594.860070128808 990.4212172784983 1449.5087614889417 1029.2424556250908 1406.0739824574675 1404.9926414432111 1348.4036151709377 1425.9772278096625 1.0059055343922285 0.9609356351405227 1.0079962443325852 1.1184330570121053 0.6945561247144252 1.016502040299356 0.721780429275181 0.9860423820492794 0.9852840662829628 0.9455996834129814 1.0 10.477735227461844 RIT(ph)SPLMEPSSIEK ddPTM_A549_MK2206_60min_R1 1 RITSPLMEPSSIEK 14 1 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 RIT(0.5)S(0.5)PLMEPSSIEK 49.708 0.008420200000000001 5676700.0 1399.2 1134.8 1413.5 1046.6 1735.6 1326.5 1622.1 1357.3 2208.7 2053.2 2752.6 True False 1635.3507528443633 1192.5564728773043 1613.955554640207 1303.0170469836592 1480.295539135418 1466.869349540564 1916.8145731975062 1549.701431556919 1708.4329765691366 1589.3806939906706 2069.053452104749 0.7903859376763802 0.5763777981009498 0.7800453647045259 0.6297648065390299 0.7154457694795581 0.7089567203053107 0.9264210024383964 0.748990525102424 0.8257075112444435 0.7681680201997052 1.0 11.014755201049153 -9.723296813825593 0.23343367641244792 1.096277331894893 0.6456187859248466 0.18985990662781194 0.10344311777706199 1.3748687263814947 0.17894372263136576 0.20599516506039323 0.08547365486606313 1.891050758889664e-10 9.723296813825593 -0.4506585459700465 RIT(ph)SPLMEPSSIEK ddPTM_A549_PD325901_60min_R1 2 RITSPLMEPSSIEK 14 1 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 RIT(0.587)S(0.413)PLMEPSSIEK;RIT(0.582)S(0.418)PLMEPSSIEK 65.02199999999999 0.0015089 15662700.0 5393.1 4679.5 5249.2 5271.2 5161.0 5082.8 4909.1 5379.2 5114.200000000001 5306.299999999999 6467.8 True False 5940.603541809616 5073.857887706678 5605.442278003852 5596.790052236213 4798.509164483433 5041.407361996968 5095.918486862596 5271.9076360992385 4899.267959109567 4971.259312421174 5672.301602762267 1.0473003655018438 0.8944971976165439 0.9882130166128937 0.9866876700475021 0.8459545173244456 0.8887763230964182 0.8983863771244133 0.929412433487661 0.8637178172478959 0.8764095530463855 1.0 12.469718529023949 -5.250909596191971 23.62650527949312 0.9278145885302808 1.0473005137026843 0.3275284950216264 0.05159219366525946 764.7233953656593 1715795.3768034016 0.008183052609928255 0.15243141076150954 5.61164777316141e-06 5.250909596191971 0.11948592517240353 RITEAEKNER ddPTM_A549_PD325901_60min_R1 1 RITEAEKNER 10 2 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 34.887 0.052849 4386400.0 1052.7 1052.4 922.55 820.29 1236.2 1315.7 1145.7 876.93 1380.3 1287.5 1423.7 False True 1159.5693290432189 1141.089441398121 985.159790743819 870.9574502862432 1149.3735766584807 1304.9853754189448 1189.3002404510958 859.4389432117232 1322.2907911225484 1206.207030273876 1248.5939255778844 0.9287001204226887 0.9138995617570321 0.7890153640526958 0.6975506066819439 0.920534333151203 1.0451639629873746 0.9525116341573215 0.6883254239875872 1.059023886016869 0.9660522973596956 1.0 10.28608863686019 -8.830340024940048 24.999998330289813 1.027872690391878 0.870853008941525 0.26034649737973414 0.10459315850236975 43.875359557749825 15919.15830063296 0.018557045274414055 0.019755479904775688 1.4779507936539407e-09 8.830340024940048 -0.15701968145035305 RIVDGK ddPTM_A549_MK2206_60min_R1 1 RIVDGK 6 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 0 68.312 0.054123000000000004 16972000.0 2019.8 2331.6 1964.8 1791.7 2977.4 2351.9 1898.2 1889.2 2846.2 2645.1 2663.8 False True 2360.6928606311076 2450.2684809311972 2243.438184476179 2230.666580432469 2539.428404137931 2600.7764969351306 2243.0783693012186 2156.9998854323508 2201.5402444474457 2047.570072898267 2002.3049428600712 1.1789876806971864 1.223723933593881 1.1204278311732454 1.1140493801339812 1.2682525772076647 1.2988913133382216 1.1202481306854435 1.077258433149206 1.0995029764561182 1.0226065116602767 1.0 10.967445992127592 -8.991335929494841 0.6281083191229683 1.0176784396052307 1.1941137786953522 0.564036303459341 0.059924855202607596 0.370530756010019 0.32395082716388685 0.021900315405009953 0.018612100525912067 1.0201500859804974e-09 8.991335929494841 0.17643533909012143 RIVDGK ddPTM_A549_PD325901_60min_R1 2 RIVDGK 6 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 73.975 0.04713 96987000.0 6646.6 6726.299999999999 6986.6 6972.7 8121.9 7262.700000000001 8230.9 7784.5 7010.1 8191.9 8306.2 False True 7321.357939031687 7293.148906951902 7460.752689838782 7403.387842849341 7551.445763033911 7203.554979140513 8544.131403621306 7629.2320406778845 6715.489875279417 7674.6620359616045 7284.590057340045 1.0050473508326792 1.0011749253622355 1.0241829164183691 1.0163080948377587 1.0366329063946405 0.9888758217605012 1.172904904238521 1.0473111020146664 0.9218761553387351 1.053547553884452 1.0 12.830632071106509 -8.745865173556464 24.994937405238222 0.9631081835114236 1.03724646383869 0.05128552033304834 0.056433378164593546 227.09798254523673 364467.70517183613 0.009130553806671075 0.010335666581605677 1.7952908872326945e-09 8.745865173556464 0.07413828032726644 RIVQNSNGYK ddPTM_A549_PD325901_60min_R1 2 RIVQNSNGYK 10 1 O60701;O60701-3;E7ER83;E7ETF4;E7EV97 O60701 UGDH UDP-glucose 6-dehydrogenase 0 ; 121.6 4.2967e-05 6966100.0 4078.6 4124.8 3774.8 3984.6 4337.700000000001 4917.0 4346.200000000001 4448.3 4664.7 5256.2 4583.8 False True 4492.656469493374 4472.411371986857 4030.980627716406 4230.719692316821 4033.034916252624 4876.957582226153 4511.597019331898 4359.575166876158 4468.658880931212 4924.322634971294 4020.0216591022695 1.1175702149069144 1.1125341481333246 1.0027260969077922 1.052412163685109 1.0032371112033414 1.2131669915716947 1.1222817690836533 1.0844655916231345 1.111600697676124 1.2249492795197945 1.0 11.972987559050186 -10.802870176194924 1.0136365979121893 0.9992249681771436 1.0908473847088167 0.0 0.08697324128440607 0.6252541062261238 1.1245882948071881 0.04150631208596472 0.01000641103589469 1.574453446059885e-11 10.802870176194924 0.09162241653167313 RKADGEDAGAES(ph)NEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER ddPTM_A549_MK2206_60min_R1 2 RKADGEDAGAESNEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER 44 2 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RKADGEDAGAES(1)NEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER;RKADGEDAGAES(1)NEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER 143.1 3.6822e-41 183067000.0 1095.74 1270.52 870.55 762.05 1601.53 1042.67 1138.08 837.3199999999999 1568.63 1935.48 1047.8799999999999 True False 1280.6741237290478 1335.1840411703133 994.0070803622448 948.7522842097246 1365.9470585339618 1153.004647331669 1344.8544044538673 956.012674184955 1213.3378095873786 1498.253723750761 787.662475983261 1.6259173983505393 1.6951220629160555 1.2619708449630003 1.20451629109965 1.7341781539469836 1.4638308698054219 1.707399356272556 1.213733932153538 1.5404286056317908 1.9021519615752285 1.0 9.621433737551145 -10.882014909294172 0.6108987105287361 0.9044473318570493 1.5017493887402729 0.0 0.32742390037308977 0.8449206527613489 0.41261764056045236 0.2871221610149237 0.038289815098202694 1.3121548520768369e-11 10.882014909294172 0.5973020568832236 RKADGEDAGAES(ph)NEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER ddPTM_A549_PD325901_60min_R1 2 RKADGEDAGAESNEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER 44 2 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RKADGEDAGAES(1)NEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER;RKADGEDAGAES(1)NEEAPGEPSAGSSEEAPGEPSAGSSEEAPGER 234.67 1.1666999999999998e-157 239870000.0 2236.0 2139.63 2410.8 2475.12 2343.88 2303.2 2407.7 2324.05 2409.51 2562.83 2429.15 True False 2462.997073943801 2319.944129132139 2574.4113853180847 2628.002540994632 2179.2539547470315 2284.4435028235257 2499.3263410439945 2277.694999568044 2308.2466739967344 2401.012476424697 2130.379949650571 1.1561304237527144 1.0889813948505576 1.2084282832930082 1.2335839630041967 1.022941450000258 1.072317406666461 1.173183375788877 1.0691496603418729 1.0834906113228007 1.1270348638131502 1.0 11.056895040274147 -10.059965938404277 0.18048961089056367 0.919628632649754 1.1855718300176004 0.07370181484963911 0.06819473208688419 4.626388982144409 0.33408650101405335 0.3413048870280321 0.12567279620327887 8.710319020676117e-11 10.059965938404277 0.26594319736784633 RKADTTTPTPTAILAPGS(ph)PASPPGSLEPK ddPTM_A549_PD325901_60min_R1 1 RKADTTTPTPTAILAPGSPASPPGSLEPK 29 2 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHL0;A0A140T9V2;A0A140T9F7;U3KQA6;E9PIQ3;H0YDJ7;U3KPW0 P25440-2 BRD2 Bromodomain-containing protein 2 1 RKADT(0.001)T(0.001)T(0.001)PT(0.001)PT(0.001)AILAPGS(0.862)PAS(0.112)PPGS(0.019)LEPK 46.31 0.0029249000000000002 3566600.0 1340.9 1496.9 1418.2 1308.8 1716.1 1560.3 1269.2 1624.6 1635.6 1620.0 1811.7 True False 1477.027180881593 1623.049016371006 1514.4475803293956 1389.6416034995357 1595.5670562236041 1547.5934341158154 1317.500100532889 1592.196078525956 1566.861419952213 1517.712923529071 1588.8723853125318 0.92960718213443 1.0215099912204413 0.9531587271129413 0.8746086950376399 1.0042134730095114 0.9740199706544734 0.8292044803042733 1.0020918566174024 0.986146800986796 0.955213859564018 1.0 10.633787539952564 RKADTTTPTPTAILAPGSPAS(ph)PPGSLEPK ddPTM_A549_MK2206_60min_R1 1 RKADTTTPTPTAILAPGSPASPPGSLEPK 29 2 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHL0;A0A140T9V2;A0A140T9F7;U3KQA6;E9PIQ3;H0YDJ7;U3KPW0 P25440-2 BRD2 Bromodomain-containing protein 2 1 RKADTTTPTPTAILAPGS(0.006)PAS(0.994)PPGSLEPK 107.52 2.4245000000000002e-15 2022400.0 378.3 786.48 1042.3 916.63 1164.3 911.46 976.85 850.37 1273.6 1197.5 1208.4 True False 442.1477914529896 826.5084726723139 1190.1138129476396 1141.204391149084 993.0330123388834 1007.9100922218181 1154.331000448791 970.9125516489032 985.1316335212799 926.9839183001308 908.3209298566367 0.48677485778377394 0.9099300098730132 1.3102349333021306 1.2563889630168534 1.093262281752791 1.1096409419751012 1.2708404733456742 1.0689091484461837 1.0845633972969957 1.0205466898648254 1.0 9.827058313401324 -5.349578846486513 3.344265970078342 1.09448823215648 0.4572373636084144 0.7551069048203188 0.10613083725500957 0.11014001650303948 1.9784810204685728 0.016186177030180462 0.15428962393702836 4.471169700008933e-06 5.349578846486513 -0.6372508685480656 down RKADTTTPTPTAILAPGSPAS(ph)PPGSLEPK ddPTM_A549_PD325901_60min_R1 2 RKADTTTPTPTAILAPGSPASPPGSLEPK 29 2 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHL0;A0A140T9V2;A0A140T9F7;U3KQA6;E9PIQ3;H0YDJ7;U3KPW0 P25440-2 BRD2 Bromodomain-containing protein 2 1 RKADTTTPTPTAILAPGS(0.159)PAS(0.795)PPGS(0.045)LEPK;RKADTTTPTPTAILAPGSPAS(0.999)PPGS(0.001)LEPK 136.12 3.0462999999999997e-28 9881100.0 6151.0 5876.4 5709.5 6385.099999999999 8270.2 7223.700000000001 6637.5 7910.299999999999 7641.3 6578.4 8135.200000000001 True False 6775.444991873127 6371.624851227596 6096.981004012615 6779.493125385764 7689.329682641136 7164.8725822101005 6890.0936946793645 7752.522860989697 7320.16273433654 6163.038701323232 7134.621973281728 0.9496571811718022 0.8930571059109422 0.8545625860550217 0.9502245740242612 1.0777487176526968 1.0042399736162135 0.9657265262941622 1.086605974363033 1.0260056891240543 0.8638213383137952 1.0 12.800621275439527 -6.538731604240636 7.536387550135379 1.0177887108502097 0.8989708152877596 0.35398747768986416 0.06022444035837602 0.06586976338984975 19.483647441300395 0.005292684222528729 0.01125593248266241 2.892466886441979e-07 6.538731604240636 -0.11881789556245015 RKAEDS(ph)DS(ph)EPEPEDNVR ddPTM_A549_MK2206_60min_R1 2 RKAEDSDSEPEPEDNVR 17 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 RKAEDS(1)DS(1)EPEPEDNVR;RKAEDS(1)DS(1)EPEPEDNVR 88.945 5.7114999999999994e-06 147171000.0 5457.9 6224.8 6086.4 5211.5 8474.7 6072.299999999999 5782.200000000001 4801.5 9441.8 8975.8 8840.7 True False 6379.060087156413 6541.615731729505 6949.5430405108955 6488.317733953126 7228.082856367209 6714.866755533482 6832.750893990889 5482.127328977046 7303.247375456366 6948.160546036164 6645.310199092657 0.959934133402441 0.9843958424427937 1.0457815861567723 0.9763754496876659 1.0876968327760115 1.0104670142336354 1.0282064627959466 0.8249618399643058 1.0990077448082924 1.0455735455336395 1.0 12.698120829874215 RKAEDS(ph)DS(ph)EPEPEDNVR ddPTM_A549_PD325901_60min_R1 2 RKAEDSDSEPEPEDNVR 17 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 RKAEDS(1)DS(1)EPEPEDNVR;RKAEDS(1)DS(1)EPEPEDNVR 122.65 4.9326e-10 355410000.0 9498.099999999999 9602.7 10720.0 9998.0 12087.8 11081.6 10316.099999999999 11058.5 11056.8 12293.0 13338.0 True False 10462.340119868339 10411.953229678582 11447.523664596767 10615.553752894531 11238.794628646167 10991.355123692772 10708.68483068652 10837.929542274576 10592.121147057733 11516.817882063495 11697.510556548297 0.8944074099605316 0.8900999216324659 0.9786290518189286 0.9075053791639381 0.960785166580137 0.9396319901194518 0.9154669943590493 0.9265159018136107 0.9055021661107402 0.984552894941937 1.0 13.51391391022442 -10.83775066916702 1.0062093212446814 1.001431924142479 0.9244711961970014 0.499707775025532 0.026105266378307318 0.34558823224497703 0.60202583829263 0.019505088304597285 0.004442743458516759 1.452945522146505e-11 10.83775066916702 -0.07696072794547759 RKAEDS(ph)DSEPEPEDNVR ddPTM_A549_MK2206_60min_R1 2 RKAEDSDSEPEPEDNVR 17 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RKAEDS(0.523)DS(0.477)EPEPEDNVR;RKAEDS(0.981)DS(0.019)EPEPEDNVR 108.18 2.2884e-09 38927000.0 7560.4 7772.7 7412.200000000001 7081.5 3688.7 2455.4 1717.6599999999999 2101.6000000000004 2822.9 10824.0 11164.5 True False 8836.410685966643 8168.297230114047 8463.361416416092 8816.467817900615 3146.097116391343 2715.2287982373905 2029.7365882488305 2399.508235880073 2183.5176572449914 8378.850882405515 8392.04652547536 1.0529506311889891 0.9733379343546193 1.0084979141529118 1.050574230151949 0.37489033298860736 0.32354787238069904 0.2418643154667041 0.28592646961572404 0.26018893610951566 0.9984276012972775 1.0 13.034806960895489 -6.751337287670397 24.982290012301288 0.5425658934357066 1.0169942578826685 0.4823436188934329 0.2582388820826294 193.2758971942511 477964.2684550366 0.0468404928074717 0.09662408571842039 1.7728121207154235e-07 6.751337287670397 0.4744283644469619 RKAEDS(ph)DSEPEPEDNVR ddPTM_A549_PD325901_60min_R1 1 RKAEDSDSEPEPEDNVR 17 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RKAEDS(0.503)DS(0.497)EPEPEDNVR 96.016 5.3179e-07 17749000.0 15228.0 14328.0 15438.0 14641.0 16748.0 16334.0 16033.0 15402.0 15881.0 16802.0 17496.0 True False 16773.9353497389 15535.47084412038 16485.715516235527 15545.341317876464 15571.678257463393 16200.98131952045 16643.144588594238 15094.795027364735 15213.576797665139 15741.118852552749 15344.10291628197 1.0931844918701439 1.0124717573182689 1.0744007392404913 1.013115032054494 1.014831452996834 1.0558441511969543 1.0846606464646313 0.9837522017235241 0.9914934017759796 1.0258741705811616 1.0 13.905396681524367 -8.281419693915877 24.75101994772957 0.9949534445165175 1.0467764611391706 0.40559657778741465 0.02841835038520457 454.97365599315856 563606.4864707725 0.004168656451668683 0.005043014986531979 5.230946835105901e-09 8.281419693915877 0.051823016622653095 RKAEDSDS(ph)EPEPEDNVR ddPTM_A549_MK2206_60min_R1 2 RKAEDSDSEPEPEDNVR 17 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RKAEDS(0.155)DS(0.845)EPEPEDNVR;RKAEDS(0.352)DS(0.648)EPEPEDNVR 104.86 4.0954000000000006e-09 41631000.0 8106.22 7985.58 6688.15 7165.799999999999 3784.6000000000004 2267.75 2118.48 1774.6 3600.3 11360.0 11319.3 True False 9474.351757948856 8392.011912830052 7636.6302389578395 8921.421321684984 3227.8903534293063 2507.72179978938 2503.3803939507147 2026.1549844845704 2784.8377984976973 8793.768110137355 8508.405413212697 1.1135284812870039 0.9863201746120492 0.8975395350930178 1.048542104943767 0.37937665128376674 0.29473463921866494 0.29422439016166496 0.23813568889631842 0.3273043141753829 1.0335389162911206 1.0 13.054673061930668 -6.750102251329538 24.993337340335362 0.5641920468283639 1.0015465741938807 0.4434142535625152 0.2659610661292292 222.08697931842985 489599.9416264687 0.04662040688122609 0.09637038316795497 1.777860776973553e-07 6.750102251329538 0.43735452736551683 RKAEDSDS(ph)EPEPEDNVR ddPTM_A549_PD325901_60min_R1 2 RKAEDSDSEPEPEDNVR 17 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RKAEDS(0.013)DS(0.987)EPEPEDNVR;RKAEDS(0.192)DS(0.808)EPEPEDNVR 150.94 2.8899e-17 68412000.0 3428.0 3828.1 3903.3999999999996 3541.9 4062.3 3866.8999999999996 2960.6 3817.7 3809.5 4173.8 4154.5 True False 3776.0080364397795 4150.707421718117 4168.308197051023 3760.6751187614695 3776.9780621742 3835.409248466608 3073.267253102484 3741.5529785722865 3649.399962893104 3910.265555694838 3643.522837545354 1.0363618412183966 1.1392017030732966 1.1440324056975633 1.0321535740105423 1.036628074141222 1.0526650770358634 0.8434878523151919 1.0269053181214518 1.0016130337614981 1.0732101128613178 1.0 11.831118318175786 -6.7024001902142265 1.5797638642343805 0.9939476221968507 1.1075106612318186 0.3257920070295943 0.062441387642014415 0.27590053703405726 1.3826648769344156 0.008323757292827085 0.021846986070895698 1.984265629406977e-07 6.7024001902142265 0.1135630390349679 RKAENQNESS(ph)QGK ddPTM_A549_PD325901_60min_R1 2 RKAENQNESSQGK 13 2 B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8 B3KRP1 TLK1 Serine/threonine-protein kinase tousled-like 1 1 RKAENQNES(0.115)S(0.885)QGK;RKAENQNES(0.022)S(0.978)QGK 73.887 0.00024430000000000003 7938700.0 1363.1100000000001 885.53 1010.54 909.33 935.1400000000001 1004.0899999999999 665.81 844.98 909.45 1045.06 1182.3 True False 1501.4919237314555 960.1567208678047 1079.121321270673 965.497248861731 869.4589924578646 995.9130239449787 691.1477638952119 828.1262110260137 871.2289791975674 979.0747332489448 1036.884595217203 1.4480800762759216 0.9260015292894522 1.0407342593845965 0.9311520812588425 0.8385301473938219 0.9604858906562869 0.6665618980967045 0.7986676770451399 0.840237171249579 0.9442465803475956 1.0 10.018039616447902 -2.770825273026668 1.1485587518653915 0.8955492094793006 199.97456948298625 0.7175706263766952 0.09972319466010483 249.69648755371702 1.1565583005856248 0.015993626732118207 129982.96102027118 0.0016950196098860129 2.770825273026668 199.07902027350696 RKAPAPPVLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 RKAPAPPVLSPK 12 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 RKAPAPPVLS(1)PK;RKAPAPPVLS(1)PK 74.678 0.00026817 6048700.0 3366.3 4279.299999999999 4476.799999999999 3949.5 5121.9 3528.8 4383.9 3828.4 6048.299999999999 5438.9 5469.9 True False 3934.4491418667676 4497.098091631869 5111.67755713709 4917.12767729979 4368.4752949399 3902.215273772141 5180.397883879257 4371.087423983282 4678.369707150405 4210.2487125199 4111.572868439935 0.9569206889332419 1.0937658739192466 1.2432413873468884 1.1959237582880318 1.0624827613957484 0.9490808988757553 1.2599552652084869 1.0631180727782688 1.1378540176342615 1.0239995367314034 1.0 12.005474682318756 -10.829600474596615 0.9562586286471334 0.9965922670433102 1.1121560190679243 0.12194172659945701 0.09680317821110816 0.9257955249378605 1.4282898126934607 0.07659815258405274 0.016756784540714345 1.48046970704079e-11 10.829600474596615 0.11556375202461411 RKAPAPPVLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 RKAPAPPVLSPK 12 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 RKAPAPPVLS(1)PK;RKAPAPPVLS(1)PK 82.90799999999999 0.00012529999999999998 16517000.0 4479.4 4393.0 4723.200000000001 5262.1 7271.8 6280.6 5921.6 5984.1 6039.1 6441.8 6385.4 True False 4934.145390440006 4763.213527234841 5043.744754908903 5587.127965903816 6761.053854348113 6229.452875926291 6146.949728423856 5864.742431064364 5785.297628535955 6035.063648635536 5600.036280385625 0.881091682873925 0.850568333622803 0.9006628711629676 0.9976949587760671 1.2073232236064262 1.1123950924648873 1.0976624830010155 1.0472686492417707 1.0330821692707983 1.0776829553361311 1.0 12.45122045850427 -6.282995752917399 3.515186984613859 1.0447121496960845 0.8703417006982707 0.6702808625356474 0.059225738168390746 0.13553849162424508 3.5639232155267955 0.009653305366346614 0.02553798166544451 5.211998080333282e-07 6.282995752917399 -0.17437044899781384 RKAS(ph)EEIEDFR ddPTM_A549_MK2206_60min_R1 2 RKASEEIEDFR 11 2 Q96FT9-3;Q96FT9 Q96FT9-3 IFT43 Intraflagellar transport protein 43 homolog 1 RKAS(1)EEIEDFR;RKAS(1)EEIEDFR 82.34899999999999 0.00023127 39945000.0 5846.9 6194.7 5486.4 4625.9 7575.5 6061.6 5067.2 5121.5 7526.0 6747.299999999999 7731.700000000001 True False 6833.713777019519 6509.983770297001 6264.454018378516 5759.245707664539 6461.153985204168 6703.034488635566 5987.8446491008 5847.4883089359455 5821.373016552417 5223.08024379663 5811.705505935585 1.175853416873952 1.1201503179485357 1.0779028655152143 0.9909734245450894 1.111748346265187 1.1533678851740943 1.03030765116803 1.0061570227472494 1.0016634550059287 0.8987172936519611 1.0 12.504745884416973 -7.942191792283155 6.38620101571541 1.0019447803666872 1.0994727285312504 0.536092338090708 0.05414999634742422 0.12675715211423857 10.5378688878769 0.00713803660157814 0.009876098611424576 1.142373730515104e-08 7.942191792283155 0.09752794816456323 RKAS(ph)ELR ddPTM_A549_MK2206_60min_R1 1 RKASELR 7 2 P35269;M0QXD6;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 RKAS(1)ELR 55.567 0.013041 8777000.0 1887.7 2061.5 1890.1 1818.5 2129.4 1750.4 1427.5 1843.0 2887.8 2458.3 2651.8 True False 2206.297610166029 2166.421544621575 2158.1446012206966 2264.032581635568 1816.168080799122 1935.6261661785163 1686.858272140707 2104.2508939507866 2233.7179108689947 1902.9683226365003 1993.2848740432223 1.1068651746153708 1.0868599731192252 1.0827075594283064 1.1358299112776364 0.9111432612816487 0.9710735236013958 0.8462705427142719 1.0556699252337567 1.120621512738454 0.9546895917473542 1.0 10.960932195039556 RKAS(ph)ELR ddPTM_A549_PD325901_60min_R1 1 RKASELR 7 2 P35269;M0QXD6;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 RKAS(1)ELR 44.309 0.026648 16480000.0 1100.3 1809.1 1820.3 1717.3 2167.4 2007.3 1907.9 1967.1 2045.5 2484.1 2625.3 True False 1212.0016460019513 1961.5592060370016 1943.8365043531246 1823.373720728724 2015.169301124082 1990.9532143181948 1980.5061785429407 1927.8646473399035 1959.5347484178615 2327.2535020608407 2302.4047431478666 0.5264068577034343 0.8519610689105608 0.844263594460588 0.7919431742638753 0.875245461129882 0.8647277244556695 0.8601902790710796 0.8373265617513067 0.8510817892681933 1.0107925242018918 1.0 11.168925753929402 -2.0000000000000004 0.0740441002007349 1.143631266994069 0.04656352157259319 0.5836401339727477 0.07720491268118032 108.84010858283627 0.575375783697663 1.380227659612717 12.329627837936942 0.00999999999999999 2.0000000000000004 -1.0970677454214757 RKAS(ph)GPPVSELITK ddPTM_A549_MK2206_60min_R1 4 RKASGPPVSELITK 14 2 P10412;P16402 P10412;P16402 HIST1H1E;HIST1H1D Histone H1.4;Histone H1.3 1 RKAS(1)GPPVSELITK;RKAS(0.996)GPPVS(0.004)ELITK;RKAS(0.996)GPPVS(0.004)ELITK;RKAS(1)GPPVSELITK 118.24 6.2039e-07 30352800.0 11753.1 13779.0 15139.8 13821.8 19319.4 14437.400000000001 13716.1 11277.900000000001 22171.2 19369.0 21431.100000000002 True False 13736.735944293237 14480.292245132507 17286.85129546643 17208.14162048417 16477.54185225443 15965.156085229506 16208.137825925853 12876.576862120226 17149.45860013114 14993.52944764528 16109.16640173003 0.8527279191068504 0.8988852609764716 1.0731065074608654 1.0682204895863585 1.022867443375893 0.9910603495606664 1.006143795509195 0.7993322895179329 1.0645776555073259 0.930745208891446 1.0 13.975594220632681 -5.622723998267236 5.523694326934803 1.0153742202649143 0.863857883784215 0.2427188544296094 0.0760531324198299 0.15295658895820732 6.840849728229631 0.010021588395666177 0.04079579601083805 2.3838339562041556e-06 5.622723998267236 -0.1515163364806993 RKAS(ph)GPPVSELITK ddPTM_A549_PD325901_60min_R1 4 RKASGPPVSELITK 14 2 P10412;P16402 P10412;P16402 HIST1H1E;HIST1H1D Histone H1.4;Histone H1.3 1 RKAS(1)GPPVSELITK;RKAS(0.999)GPPVS(0.001)ELITK;RKAS(1)GPPVSELITK;RKAS(1)GPPVSELITK 140.06 1.5740999999999998e-10 60081000.0 12662.4 12884.5 14079.8 13888.300000000001 16675.2 19104.7 15835.5 17609.899999999998 17522.699999999997 16549.4 16831.9 True False 13947.877526433795 13970.32203315669 15035.33989671543 14746.148748382191 15503.991478317015 18949.117657343108 16438.128618018098 17258.656729800703 16786.281855830664 15504.468059661725 14761.68300620522 0.9448704135274186 0.9463908706943597 1.0185383259073628 0.998947663500395 1.0502861680338047 1.2836691893043402 1.1135673765049803 1.1691523739228011 1.137152304975956 1.0503184530615017 1.0 13.849569594598623 -6.798409720143737 3.494878590080695 1.0949300610201935 0.9753814109652014 0.44502869344062723 0.07309699622599006 0.2395696572609709 6.070035846300611 0.012816254578274166 0.026268049969585844 1.5907073210025926e-07 6.798409720143737 -0.11954865005499216 RKAS(ph)GSENEGDYNPGR ddPTM_A549_MK2206_60min_R1 2 RKASGSENEGDYNPGR 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 RKAS(0.892)GS(0.108)ENEGDYNPGR;RKAS(0.839)GS(0.161)ENEGDYNPGR 80.975 5.4308e-05 10801600.0 1878.76 1844.85 1790.8 1490.79 2069.67 1769.7800000000002 1706.4299999999998 1390.75 2167.96 2611.67 2989.19 True False 2195.8487567280417 1938.7449850085418 2044.762368057788 1856.0336169241064 1765.2242846752715 1957.0569449151137 2016.4662426123064 1587.893071493247 1676.9205215207255 2021.69193311641 2246.891625552929 0.9772828968498531 0.8628564737880686 0.9100404954131245 0.8260450107233642 0.7856294734468443 0.8710063817312547 0.8974470418065144 0.7067065689483303 0.7463290629818689 0.8997727839316235 1.0 11.133714825268942 -4.353861947742711 16.72260497465506 0.8647749648269867 0.8657059851000372 0.0 0.08639586683917236 0.0 0.0 0.014085532228618625 0.0 4.427290834207355e-05 4.353861947742711 0.0009310202730504757 RKAS(ph)GSENEGDYNPGR ddPTM_A549_PD325901_60min_R1 2 RKASGSENEGDYNPGR 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 RKAS(0.966)GS(0.034)ENEGDYNPGR;RKAS(0.952)GS(0.047)ENEGDYNPGR 94.057 2.3372e-06 31079000.0 2623.2 2821.1000000000004 2919.9 3211.8 3249.8 3281.8 2958.1 3258.1 3242.2 3675.7000000000003 4325.3 True False 2889.5053329022244 3058.843997651311 3118.061972785083 3410.185591472963 3021.54525920137 3255.0741088773225 3070.6721142344313 3193.1146395699943 3105.94160905421 3443.6156747011146 3793.3155203357574 0.7617360900804966 0.8063774239851695 0.8219885627940315 0.8989986657295298 0.7965446699603633 0.858107924697286 0.8094955712944852 0.8417740687406258 0.8187933728168476 0.9078115585798436 1.0 11.889243661749518 -10.757267926260315 0.6195771116167457 1.0260873440651777 0.8223912396909159 0.5424934081779729 0.04290176197271161 0.37829228029587114 0.20572644347571112 0.04314579593035184 0.00690182098467189 1.7487675008552942e-11 10.757267926260315 -0.20369610437426178 RKAS(ph)PEPEGEAAGK ddPTM_A549_MK2206_60min_R1 8 RKASPEPEGEAAGK 14 2 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK 146.76 7.576100000000001e-14 490247000.0 16543.4 16367.300000000001 16114.6 14414.58 20153.200000000004 15240.2 14186.89 14248.79 20164.699999999997 23824.399999999998 25420.499999999996 True False 19335.521472702578 17200.32565960936 18399.89259342419 17946.152747095086 17188.69097678261 16852.90784837399 16764.464274921378 16268.599617589267 15597.42764640905 18442.451493235592 19107.888279891293 1.011913048133678 0.9001688416668518 0.9629474656698626 0.9392012599310207 0.8995599474417902 0.8819869365737085 0.8773582946140583 0.8514075118761277 0.8162821248449222 0.9651747604492752 1.0 14.221880726338442 -2.0000000000201195 0.7050384793823052 0.9030443594163587 13.576515444823857 0.2402844983603888 0.05164638694054932 425.8776189881478 2.059002232441625 0.011263708815516119 8528.193264138836 0.009999999999536732 2.0000000000201195 12.673471085407497 RKAS(ph)PEPEGEAAGK ddPTM_A549_PD325901_60min_R1 5 RKASPEPEGEAAGK 14 2 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK 169.67 3.3604999999999997e-23 588926000.0 19301.65 18657.72 20492.22 19404.39 23713.8 21392.870000000003 23018.129999999997 23532.17 21745.4 23168.760000000002 24028.36 True False 21261.13929887628 20230.071543674036 21882.94527892938 20602.95509973287 22048.224496168812 21218.653559503447 23894.09753315403 23062.80240871977 20831.516459665483 21705.88053959469 21073.02404832381 1.0089268274985637 0.959998503170843 1.038434029627086 0.9776933321239042 1.0462771952240322 1.0069107077771888 1.1338713171095447 1.0944230099976673 0.9885394906727905 1.0300315934637403 1.0 14.363109740048692 -4.374723113063411 17.333918435033944 1.0125135832434355 0.8402244311824956 0.0 0.05072337896561821 0.0 0.0 0.006930164271858729 0.0 4.2196544417502216e-05 4.374723113063411 -0.17228915206093998 RKAS(ph)PEPPDSAEGALK ddPTM_A549_MK2206_60min_R1 4 RKASPEPPDSAEGALK 16 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RKAS(1)PEPPDSAEGALK;RKAS(1)PEPPDSAEGALK;RKAS(1)PEPPDSAEGALK;RKAS(1)PEPPDSAEGALK 206.74 6.4666e-41 223438000.0 19157.800000000003 21176.199999999997 21973.8 19305.0 28458.0 22166.6 21279.2 20451.7 30209.0 30951.5 32359.8 True False 22391.168276759414 22253.978129136733 25090.015257554292 24034.72586663439 24271.86589808463 24512.254899001764 25145.355197573743 23350.791105704437 23366.709733860196 23959.534653249684 24323.968574954328 0.9205392700521303 0.9148991481616613 1.0314934908849018 0.9881087369674634 0.9978579697342914 1.0077407731993746 1.0337686105821224 0.9599910077892494 0.9606454498514773 0.9850174974292686 1.0 14.570091010317523 -5.739542512504391 24.990242282834433 0.9889327822932761 0.9177191247716656 0.6132002011434329 0.023446777489820714 138.7760100437894 158378.42225831948 0.00357506053744428 0.013821749644007305 1.821618748547757e-06 5.739542512504391 -0.07121365752161046 RKAS(ph)PEPPDSAEGALK ddPTM_A549_PD325901_60min_R1 6 RKASPEPPDSAEGALK 16 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RKAS(1)PEPPDSAEGALK;RKAS(1)PEPPDSAEGALK;RKAS(1)PEPPDSAEGALK;RKAS(1)PEPPDSAEGALK;RKAS(0.998)PEPPDS(0.002)AEGALK;RKAS(0.863)PEPPDS(0.137)AEGALK 210.38 7.831499999999999e-47 448158200.0 50881.899999999994 53100.799999999996 59086.4 55540.8 65395.100000000006 60521.00000000001 61795.299999999996 64322.8 65883.2 63895.4 68441.2 True False 56047.39303072495 57575.790773273824 63096.358419387114 58971.42907369122 60801.97377684761 60028.1370416736 64146.95395718569 63039.83129373957 63114.3582189996 59861.033539542856 60023.36628451291 0.9337595756468955 0.9592229549466205 1.0511965976767799 0.9824745382350689 1.0129717398495126 1.0000794816661578 1.0686997069295785 1.0502548456700764 1.0514964775523465 0.9972955074828594 1.0 15.873236611277829 -4.58486150509414 0.7633990671499963 1.0275341211025595 0.7211714151109218 0.4909229069686817 0.028863831998254326 3.96587468504218 0.7934906939100013 0.004756392096236866 1.3257959516392088 2.6009888766696457e-05 4.58486150509414 -0.30636270599163773 RKDDKS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RKDDKSPR 8 3 A0A0A6YYC7;Q96JP5-2;Q96JP5;H3BTR0 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RKDDKS(1)PR 58.978 0.0039715 7862900.0 538.65 564.61 497.34 324.5 516.84 561.56 394.2 538.36 362.92 763.96 698.25 True False 593.3333514668279 612.1916661989674 531.0924831483725 344.5436280070291 480.538941401205 556.9868415446244 409.20149671451713 527.62198746475 347.6677344882962 715.7234352217706 612.369676571439 0.9689136712137799 0.999709308969268 0.867274300912278 0.562639923544344 0.7847203409738813 0.9095598016268632 0.6682262567368973 0.8616069796578141 0.5677415910513939 1.168776741573804 1.0 9.258259034756225 -5.959326908839857 5.636868339185238 0.7800453267797551 0.9767335283743396 0.09756036782272492 0.1728537726597598 0.2393732565696822 18.95126555015499 0.023041991144710113 0.0728371900253537 1.0981788900849102e-06 5.959326908839857 0.19668820159458444 RKDPFS(ph)PDK ddPTM_A549_PD325901_60min_R1 3 RKDPFSPDK 9 2 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 RKDPFS(1)PDK;RKDPFS(1)PDK;RKDPFS(1)PDK 55.452 0.0057917 6856400.0 2390.1800000000003 2906.74 2911.87 2351.77 3099.42 2772.79 2656.9500000000003 2427.6 3315.56 3679.2400000000002 3496.1499999999996 True False 2632.8293140424844 3151.7011810049185 3109.4870086967703 2497.033491642807 2881.7274316185308 2750.2093175555933 2758.061686188829 2379.1796135846407 3176.218543370484 3446.932158496972 3066.1457139208514 0.8586771666098474 1.0279032619668498 1.014135432174388 0.8143883965807062 0.9398533861371856 0.896959758001438 0.8995207480410126 0.7759512546265295 1.0358994123957912 1.1241905897841977 1.0 11.582210545179883 RKDREDS(ph)PER ddPTM_A549_MK2206_60min_R1 3 RKDREDSPER 10 3 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER 79.875 0.00036205 335916500.0 3553.2599999999998 3605.72 2921.04 2041.1999999999998 1005.1800000000001 755.49 414.04999999999995 296.52 779.5500000000001 4419.8 5011.7 True False 4152.9634191336245 3789.2357467246684 3335.2873953492967 2541.2940916329494 857.3193535538944 835.4354503463252 489.27752544998884 338.5526180544149 602.9831696855484 3421.364110315589 3767.1565741166073 1.1024132757496252 1.005860964940975 0.885359376423428 0.6745921072390996 0.22757730842523702 0.2217681781761974 0.12987979549661371 0.08986953724741452 0.16006320890098577 0.9082086297721496 1.0 11.879260281846303 -6.2692829129030505 2.3168026127659345 0.46826322266258763 1.0364827529302594 0.4345152984858034 0.29668567425131276 0.32187999195419 3.34347287906797 0.05607669630432777 0.1702644026957773 5.379192510616641e-07 6.2692829129030505 0.5682195302676718 RKDREDS(ph)PER ddPTM_A549_PD325901_60min_R1 8 RKDREDSPER 10 3 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER 116.51 2.3667e-05 1103518300.0 9071.27 9783.93 9403.53 10862.919999999998 10096.099999999999 9334.08 7584.790000000001 9264.33 9974.76 10862.549999999997 12405.119999999999 True False 9992.178652483974 10608.456117805315 10041.710093819553 11533.897896918696 9386.984765654171 9258.06634718436 7873.433334006344 9079.545670423713 9555.55552536228 10176.686739185623 10879.368882534749 0.9184520499644947 0.9750984852472145 0.9230048362400933 1.0601624066111683 0.8628243850361225 0.8509745783183108 0.7237031319570385 0.8345654760359866 0.8783189198320448 0.9354114975844618 1.0 13.409307247126085 -4.8441321444737575 12.979630803390737 0.9189318439902611 0.8709808014035856 0.0 0.08770226440988037 24615054.004250348 9990177.315336306 0.013385356405360628 34774581.86186372 1.4317521881736115e-05 4.8441321444737575 -0.047951042586675485 RKDS(ph)AQDDQAK ddPTM_A549_MK2206_60min_R1 4 RKDSAQDDQAK 11 2 Q13045-3;Q13045;Q13045-2;J3KS54 Q13045-3 FLII Protein flightless-1 homolog 1 RKDS(1)AQDDQAK;RKDS(1)AQDDQAK;RKDS(1)AQDDQAK;RKDS(1)AQDDQAK 133.25 1.3892999999999999e-08 369896000.0 13092.000000000002 9619.2 7362.67 5258.37 2483.54 1651.9479999999999 1496.77 1999.6000000000004 2705.3500000000004 17295.6 17830.9 True False 15301.609531331069 10108.776193074867 8406.807317639064 6546.6708860572 2118.214555925544 1826.7560408856662 1768.7137344953035 2283.0494235181723 2092.592544556216 13388.51194768412 13402.99542219522 1.1416559544586402 0.7542176860207562 0.6272334692972796 0.4884483415711671 0.15804038494393596 0.1362946105212106 0.13196406316503936 0.1703387453029691 0.156128721874433 0.9989193852527088 1.0 13.710267842755535 -5.389343051208426 1.421329056396858 0.46082487400966354 1.3076577666290137 0.3286252603615737 0.31219278391084365 1.1543538248364626 2.4620692064108094 0.05588049930408033 1.289909256455557 4.079969803234661e-06 5.389343051208426 0.8468328926193501 RKDS(ph)AQDDQAK ddPTM_A549_PD325901_60min_R1 4 RKDSAQDDQAK 11 2 Q13045-3;Q13045;Q13045-2;J3KS54 Q13045-3 FLII Protein flightless-1 homolog 1 RKDS(1)AQDDQAK;RKDS(1)AQDDQAK;RKDS(1)AQDDQAK;RKDS(1)AQDDQAK 178.68 1.9851000000000002e-16 1109860000.0 21585.6 21150.2 15606.0 15105.699999999999 18276.4 15194.3 9031.099999999999 12806.099999999999 16721.199999999997 22483.199999999997 31679.5 True False 23776.954221521155 22932.601580633356 16665.1170065016 16038.744781466192 16992.728714157136 15070.562658454102 9374.783452507541 12550.672289308892 16018.466113539342 21063.606914993074 27783.122332896364 0.8558056915499472 0.8254148437981792 0.5998288027825229 0.5772837404410682 0.611620555477922 0.542435888878117 0.33742728193682575 0.4517372863613813 0.5765538488297558 0.758143979017538 1.0 14.761921121455464 -10.551787799995385 0.9234925724777228 0.9922651727756121 0.5933445660295619 0.29162647460014246 0.15447631213423987 0.3722223454318952 0.5834743139305587 0.09396382030836761 0.028383808295071915 2.806804731799201e-11 10.551787799995385 -0.39892060674605023 RKDSEEEAAS(ph)PEGK ddPTM_A549_MK2206_60min_R1 4 RKDSEEEAASPEGK 14 2 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 RKDSEEEAAS(1)PEGK;RKDS(0.001)EEEAAS(0.999)PEGK;RKDS(0.002)EEEAAS(0.998)PEGK;RKDSEEEAAS(1)PEGK 84.829 7.093e-05 34295900.0 4019.24 4384.75 4444.33 4014.6899999999996 5070.96 3742.75 3117.86 3561.3 5864.6 6991.299999999999 6566.800000000001 True False 4697.589451016427 4607.915046218502 5074.60282288936 4998.289230226281 4325.028501460091 4138.805320763623 3684.3348037664623 4066.125181023836 4536.2774638417895 5411.960474331272 4936.082325540025 0.9516837729205609 0.9335166519359824 1.0280628417870201 1.0126024852471338 0.8762067194628724 0.8384797999313804 0.7464087024446828 0.82375554394324 0.9190036074500652 1.0964080656290887 1.0 12.269150741073624 -3.0609762315177242 10.442177973320682 0.9328418710570208 1.1194332483001683 0.0 0.09816904124686064 0.0 0.0 0.012633850600224426 0.0 0.0008690079878821743 3.0609762315177242 0.18659137724314756 RKDSEEEAAS(ph)PEGK ddPTM_A549_PD325901_60min_R1 5 RKDSEEEAASPEGK 14 2 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 RKDSEEEAAS(1)PEGK;RKDSEEEAAS(1)PEGK;RKDSEEEAAS(1)PEGK;RKDSEEEAAS(1)PEGK;RKDSEEEAAS(1)PEGK 92.211 1.2776e-05 27068100.0 6229.25 5793.88 6094.420000000001 6499.14 7173.11 6510.530000000001 6106.209999999999 6294.240000000001 7124.71 6782.780000000001 7041.97 True False 6861.638874268525 6282.150601223627 6508.023989924612 6900.577117182138 6669.295499486096 6457.510402239345 6338.5851629963245 6168.696445464246 6825.283215546425 6354.514113243522 6175.852332725781 1.1110432219871527 1.0172119187394706 1.0537855569244519 1.1173481400479814 1.0798987961783937 1.0456063478106594 1.026349857720565 0.9988413117937396 1.1051564784635985 1.0289290887949205 1.0 12.592422542224181 -7.2726119421408 20.17015492460962 1.0443833281537103 1.0736782442390134 0.21180581869866266 0.03720817149365068 113.15612244446942 204285.93104633468 0.0069541163277897205 0.011213322316566044 5.338116625183515e-08 7.2726119421408 0.029294916085303102 RKDT(ph)LAMK ddPTM_A549_MK2206_60min_R1 2 RKDTLAMK 8 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RKDT(1)LAMK;RKDT(1)LAMK 69.34899999999999 0.0024559 6130400.0 3390.9 3297.6 3551.7000000000003 2837.66 5246.700000000001 4254.8 3223.7 3407.2 5129.299999999999 5639.700000000001 5113.0 True False 3963.2010204545104 3465.433754811594 4055.3844665126435 3532.8868273873977 4474.917380261466 4705.040111892341 3809.404561751312 3890.1810341123805 3967.5217398089662 4365.6878530582435 3843.3009883788363 1.0311971486069453 0.9016815922797052 1.0551826356496912 0.9192324093454944 1.1643421615409453 1.2242184846097623 0.99118038719059 1.0121978595679333 1.0323213695221223 1.1359214035692162 1.0 11.90813025024769 -5.787824745692431 24.997721201232665 1.0332002990429827 0.9664392297667544 0.08178260310250784 0.0901547295035031 372.59165015320553 352996.48066689086 0.0117565151880288 0.036567362320312 1.6299536481080787e-06 5.787824745692431 -0.06676106927622827 RKDT(ph)LAMK ddPTM_A549_PD325901_60min_R1 3 RKDTLAMK 8 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RKDT(1)LAMK;RKDT(1)LAMK;RKDT(1)LAMK 73.781 0.0025959 17952700.0 3140.65 3362.9700000000003 3587.04 3581.49 4365.38 3894.1099999999997 3265.4 3573.1800000000003 4570.35 4585.67 4448.950000000001 True False 3459.4864759756674 3646.3792842442417 3830.4781050238053 3802.7105031460533 4058.77076854344 3862.397659248057 3389.666583895442 3501.9101217945163 4378.274083320247 4296.130013604661 3901.75735421769 0.8866482874021009 0.9345479365349586 0.9817315012895833 0.9746148101791696 1.0402417167628384 0.9899123160677621 0.8687538142860953 0.8975212459096283 1.1221287450352226 1.1010756496583944 1.0 11.929908345860785 -8.757671912424502 24.99906232813781 1.0576719072117688 0.950390566897585 0.5019279987739784 0.055875431770844586 77.58430438964463 514810.22782650584 0.011243809918266076 0.012512440616234449 1.7471415317980529e-09 8.757671912424502 -0.10728134031418379 RKEAS(ph)SSEEPR ddPTM_A549_PD325901_60min_R1 2 RKEASSSEEPR 11 2 P30414 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 RKEAS(0.816)S(0.092)S(0.092)EEPR;RKEAS(0.887)S(0.047)S(0.066)EEPR 60.55 0.002711 21048500.0 2728.3 2744.1000000000004 2203.9 2145.13 2534.8 2369.1 2262.1 2521.1 2353.7 2678.0 3015.0 True False 3005.275007531693 2975.354937419788 2353.4699071273153 2277.629808156297 2356.764392585276 2349.8068350726026 2348.185453368617 2470.814682735311 2254.7821742122296 2508.9106229696617 2644.1741136597043 1.1365647186418455 1.1252492496803503 0.8900585990042705 0.8613766379415586 0.8913045402004048 0.8886732620721112 0.8880600718530519 0.934437210458712 0.8527358930579153 0.9488447110985331 1.0 11.368601463263722 -5.756559022371579 24.992728332481914 0.9145804760367804 1.1309071009566847 0.8191895680739274 0.04056628240507216 49.070233274139525 251283.68343671228 0.00784215520356446 0.028547842307931823 1.7516243652162167e-06 5.756559022371579 0.2163266249199043 RKEDEVEEWQHR ddPTM_A549_MK2206_60min_R1 2 RKEDEVEEWQHR 12 2 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 151.26 7.4167e-13 58495000.0 1946.3000000000002 1508.6599999999999 1412.1299999999999 1256.26 2006.2599999999998 2296.7 1805.29 1773.66 2259.4 2221.75 2509.6800000000003 False True 2274.78785753358 1585.444349992134 1612.3912680396716 1564.0437563956546 1711.1418116765522 2539.7352695739246 2133.287824947737 2025.0817366059403 1747.6495075203986 1719.8551319276112 1886.45719235568 1.205851829954847 0.8404348407250835 0.854719245458322 0.8290905103669926 0.9070663350382174 1.34629891410495 1.1308434845976185 1.0734840656930864 0.9264188525465835 0.9116852154911465 1.0 10.881463647425068 -5.233425807343585 22.61854900878045 0.9806696016808019 1.205853018921386 0.1612505313160033 0.14673728152500137 3765.9940764952275 3040538.6395795876 0.020623905337760703 2.167987002603435 5.842170032243089e-06 5.233425807343585 0.22518341724058422 RKEDEVEEWQHR ddPTM_A549_PD325901_60min_R1 3 RKEDEVEEWQHR 12 2 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ;; 176.42 1.4804999999999998e-16 88556200.0 3536.0799999999995 4347.6900000000005 3762.77 4216.75 4529.09 5015.779999999999 3930.4399999999996 3989.7200000000003 5592.709999999999 4416.79 4992.59 False True 3895.0602384754884 4714.0850945193815 4018.1341995741354 4477.2090705659175 4210.98234291228 4974.933150656556 4080.0150450192937 3910.1419047252084 5357.66784787292 4137.913125625905 4378.533080635587 0.8895810918276955 1.076635715136606 0.9176895836061295 1.0225363125304987 0.9617335909909386 1.136210018067146 0.9318223637645875 0.893025548217992 1.223621644328242 0.9450455322414161 1.0 12.096231896095212 -8.753691878727002 24.999694190365627 1.1055991116504738 0.9844776857775467 0.04840911923525204 0.09951776745919592 192.76930746265302 622028.5201685105 0.017384397930110047 0.01953405404333422 1.7632265687150975e-09 8.753691878727002 -0.12112142587292707 RKEDEVS(ph)IGS(ph)APLAK ddPTM_A549_PD325901_60min_R1 1 RKEDEVSIGSAPLAK 15 2 Q7Z7G8-2;Q7Z7G8-6;Q7Z7G8;Q7Z7G8-3 Q7Z7G8-2 VPS13B Vacuolar protein sorting-associated protein 13B 2 RKEDEVS(1)IGS(1)APLAK 44.788000000000004 0.042327 5222800.0 3650.6 3829.4 4042.2 4599.2 5101.0 4261.9 3938.9 4717.7 4796.6 4994.4 4386.6 True False 4021.206224570321 4152.116977280469 4316.527999723232 4883.282138458943 4742.723357494669 4227.192499428442 4088.7969949487833 4623.601772535946 4595.015582625819 4679.052731650366 3847.0760089484734 1.0452630036986046 1.0792916406180841 1.122028259821951 1.269349013926475 1.2328124909575164 1.0988065974251093 1.0628323915197038 1.2018483029140155 1.1944176751219897 1.2162620963991033 1.0 11.909546618754565 -10.864955809343478 1.0861897663094584 0.9990983351943766 1.149880666104764 0.0 0.0936823032652525 0.4624474744029616 0.9593308657953177 0.053268764368039276 0.012611618523535064 1.364721993735953e-11 10.864955809343478 0.1507823309103874 RKEDQDRS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RKEDQDRSPR 10 3 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 RKEDQDRS(1)PR 42.556000000000004 0.022616 49871000.0 175.53 263.12 291.3 150.17 121.95 0.0 185.76 0.0 111.04 312.76 234.7 True False 205.15517270352436 276.5116841236131 332.6107202452722 186.9616567413874 104.01131654618813 0.0 219.51018748361307 0.0 85.88961729444327 242.1072987787464 176.41751260952714 1.1628957333595535 1.5673709487993346 1.8853611261454217 1.0597681260544587 0.5895747820478633 0.0 1.2442652899741586 0.0 0.4868542585369438 1.3723541115479474 1.0 7.462849971196553 -6.516815888949927 4.334244540094206 0.6659999138271822 1.5397382276796936 0.4268443977537545 0.4408359212980351 0.1323397006654621 6.055883235964776 0.05695857207446832 0.1294915709963319 3.042174425488047e-07 6.516815888949927 0.8737383138525114 RKEDQDRS(ph)PR ddPTM_A549_PD325901_60min_R1 3 RKEDQDRSPR 10 3 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 RKEDQDRS(1)PR;RKEDQDRS(1)PR;RKEDQDRS(1)PR 62.924 0.0063018 245601400.0 1457.67 1225.52 1632.65 1618.52 1693.87 1340.97 1713.8400000000001 1428.8200000000002 1681.74 1712.01 1957.33 True False 1605.6515853200628 1328.7988713628145 1743.4514469220048 1718.4923044743819 1574.8984147342665 1330.0495849171866 1779.061119049233 1400.321064212394 1611.062316208386 1603.9133964265454 1716.5908185371625 0.9353723484833506 0.7740917969578708 1.0156476593575936 1.0011077106533983 0.9174570886242751 0.7748204001525669 1.0363920742424255 0.815757051179916 0.9385243698211637 0.9343597665245361 1.0 10.745330471690515 -9.835951551218999 0.9295559322692436 0.9920152685937811 0.9108165031387541 0.04071716564176919 0.08841972016221242 0.7446104004278916 1.325008710054763 0.02918162405806707 0.016581369933923482 1.4589770109388378e-10 9.835951551218999 -0.08119876545502702 RKEDSLT(ph)ASQRK ddPTM_A549_PD325901_60min_R1 1 RKEDSLTASQRK 12 3 A0A0G2JNT0;E5RIQ9;D6RC42;D6RC90;E5RHJ0;D6RCL9;O75920-2;O75920 A0A0G2JNT0 SERF1A;SERF1B Small EDRK-rich factor 1 1 RKEDS(0.014)LT(0.493)AS(0.493)QRK 45.864 0.010584999999999999 2815200.0 558.75 517.78 622.42 600.71 569.6 389.03 664.28 546.94 617.56 724.05 741.8 True False 615.4738886699902 561.4151377490681 664.6611641155142 637.8144923886052 529.5932610133235 385.86186866248516 689.5595389079639 536.0308526338703 591.6061008227495 678.333359432854 650.5633026576343 0.9460630290022518 0.8629677318957517 1.021670237777459 0.9804034285104178 0.8140533885785862 0.5931196350703922 1.0599422624839505 0.8239488001307723 0.9093751498216436 1.0426861716020186 1.0 9.345545634091922 -10.108318231814481 0.8074041506382332 0.9943540882401749 0.8877891755732791 0.14063768743978433 0.12053633123481765 1.0361673809587404 1.3390323807534545 0.0573384873769565 0.023970990819983766 7.792588947680905e-11 10.108318231814481 -0.10656491266689583 RKEEAKES(ph)PSAAGPEDK ddPTM_A549_MK2206_60min_R1 3 RKEEAKESPSAAGPEDK 17 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 RKEEAKES(0.993)PS(0.007)AAGPEDK;RKEEAKES(0.998)PS(0.002)AAGPEDK;RKEEAKES(0.986)PS(0.014)AAGPEDK 106.73 3.0041999999999996e-09 40277300.0 7089.04 6423.170000000001 5779.59 4606.08 6211.9 5365.9 5069.3099999999995 5044.93 6955.1 9231.1 9699.1 True False 8285.496641612219 6750.081917422727 6599.222769043506 5734.569806774786 5298.137738854174 5933.71597640385 5990.338008788514 5760.064276950156 5379.7809550124475 7145.788098722612 7290.545788457887 1.1364713811590759 0.9258678449162473 0.905175409431094 0.7865762006259582 0.7267134577553827 0.8138918742953212 0.8216583754637667 0.7900731226555452 0.7379119631248336 0.9801444646346711 1.0 12.83181110700953 -5.17468019282378 1.5705262706614183 0.8449142228049978 1.2889339471429362 0.5150996460666264 0.08422868796386941 1.060006541309216 2.056009660477396 0.01521672898319162 0.7655316177738368 6.688362560784589e-06 5.17468019282378 0.44401972433793835 RKEEAKES(ph)PSAAGPEDK ddPTM_A549_PD325901_60min_R1 2 RKEEAKESPSAAGPEDK 17 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 RKEEAKES(0.977)PS(0.023)AAGPEDK;RKEEAKES(0.995)PS(0.005)AAGPEDK 197.31 1.2784e-48 99984000.0 14289.7 13009.9 12729.5 12121.0 14093.1 10865.6 11147.8 12038.6 11869.6 13787.7 14707.3 True False 15740.379824478852 14106.289931248017 13593.400418701913 12869.68664121171 13103.249274555597 10777.114156078202 11572.035629310221 11798.480678901005 11370.761989645871 12917.1422689764 12898.395337256177 1.220336283150958 1.0936468888112705 1.0538830655498872 0.9977742428190627 1.0158821257949593 0.8355391406673052 0.8971686265410975 0.914724690196296 0.8815640777269529 1.0014534313168455 1.0 13.654903973649029 -5.575395426038781 0.8094850849439394 0.9321735831750851 1.2943575723576493 0.7463705620010994 0.05231458430433739 0.7044675979233777 0.4374749009125653 0.009412516534352796 0.2060618447522315 2.6583035665928943e-06 5.575395426038781 0.3621839891825641 RKEEEEEEDDDDDS(ph)KEPK ddPTM_A549_MK2206_60min_R1 1 RKEEEEEEDDDDDSKEPK 18 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;F5H6N4 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 RKEEEEEEDDDDDS(1)KEPK 63.45399999999999 0.00078309 2490900.0 376.69 396.06 358.14 380.85 409.57 392.4 536.87 408.11 531.4 778.65 721.99 True False 440.2660628137103 416.2177622909631 408.9296373108196 474.1582670970064 349.32279555409826 433.92350754596066 634.4123296421587 465.96084228445756 411.0387484714263 602.7524242040886 542.6999570896995 0.8112513315362976 0.7669389998167423 0.7535096179180831 0.8737024223103738 0.6436757382981714 0.7995642930818219 1.168992776495283 0.8585975292558237 0.7573959479851005 1.1106550061961096 1.0 9.084010984383761 -7.5442077988989364 24.997910243496722 0.9031098298926754 0.7692311668097876 0.328735603406097 0.12615533393529388 290.13425520279264 340039.6377730526 0.01936083618382909 0.028718092721261794 2.856223585801695e-08 7.5442077988989364 -0.13387866308288776 RKEEEEEEDDDDDSKEPK ddPTM_A549_MK2206_60min_R1 1 RKEEEEEEDDDDDSKEPK 18 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;F5H6N4 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 0 148.56 1.558e-17 6506100.0 643.84 845.77 799.25 854.41 811.13 851.83 760.97 809.92 1118.4 1447.3 1162.4 False True 752.5044516232961 888.8160804242485 912.5956682321796 1063.7404883559218 691.8138514974138 941.9700852010095 899.2283988447736 924.7286402759739 865.0841857178076 1120.3539248064951 873.7439993920517 0.8612413385921807 1.0172499966153519 1.0444657346627397 1.2174509800308433 0.7917809472554612 1.0780847546380052 1.0291668949605992 1.0583519210654346 0.9900888433222207 1.2822450575752553 1.0 9.771066832306225 RKEENFS(ph)SPK ddPTM_A549_PD325901_60min_R1 4 RKEENFSSPK 10 2 C9JEF0;A0A087WWI9;A0A0A0MRY1;C9JMN1;Q96SB8;Q96SB8-2 C9JEF0 SMC6 Structural maintenance of chromosomes protein 6 1 RKEENFS(0.5)S(0.5)PK;RKEENFS(0.559)S(0.441)PK;RKEENFS(0.5)S(0.5)PK;RKEENFS(0.63)S(0.37)PK 124.86 3.7746e-06 122206800.0 14055.0 13677.300000000001 13249.6 14608.7 16170.000000000002 16686.5 16337.5 16635.4 16108.2 15702.9 18086.6 True False 15481.85325325587 14829.934071488526 14148.797532317289 15511.046220235079 15034.27498347163 16550.610676391432 16959.232502723036 16303.59389678116 15431.228371774432 14711.416214126324 15862.06286040385 0.9760302546715351 0.9349309860893436 0.8919897529618703 0.9778706815590167 0.9478133528900198 1.043408465976162 1.0691694171164854 1.0278356630069532 0.9728386848280055 0.9274592052494092 1.0 13.953292785203375 -7.130371646770593 8.171842298933058 1.0005925538397027 0.9434157825400428 0.35084424119000646 0.04086315691013904 0.26546814309638445 16.424984260733574 0.005744498811907667 0.009972787905442388 7.40676137667156e-08 7.130371646770593 -0.05717677129965992 RKEENFSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 RKEENFSSPK 10 2 C9JEF0;A0A087WWI9;A0A0A0MRY1;C9JMN1;Q96SB8;Q96SB8-2 C9JEF0 SMC6 Structural maintenance of chromosomes protein 6 1 RKEENFS(0.13)S(0.87)PK;RKEENFS(0.101)S(0.899)PK 91.85799999999999 0.00012987 112067000.0 2747.6 2974.1000000000004 2608.3 3190.5 3142.3 2503.1 2360.4 2829.8 3440.0 3731.9 4553.9 True False 3211.3277076294835 3125.4689865918135 2978.1961607131598 3972.1726432269875 2680.0718325796383 2767.976380576694 2789.2541264875135 3230.93281589904 2660.8454925511955 2888.861198082886 3423.0409487538363 0.9381505379883266 0.9130679513868059 0.8700439770658825 1.160422180947927 0.7829505614168369 0.8086308116133931 0.8148468476554294 0.9438779331796385 0.7773338187846922 0.8439458485399015 1.0 11.741062835616537 RKEENFSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 RKEENFSSPK 10 2 C9JEF0;A0A087WWI9;A0A0A0MRY1;C9JMN1;Q96SB8;Q96SB8-2 C9JEF0 SMC6 Structural maintenance of chromosomes protein 6 1 RKEENFS(0.072)S(0.928)PK 113.77 2.0688000000000003e-05 49045000.0 2701.7 3146.8 3370.1 2913.3 4138.9 3825.3 3450.5 3064.7 3482.8 3734.1 3442.3 True False 2975.9745951135806 3411.9918796955617 3598.815252057606 3093.247924415647 3848.1979424298565 3794.1480250741715 3581.8106656860487 3003.5721542893607 3336.4300277632465 3498.3282887345094 3018.9189225375785 0.9857749318461654 1.1302032175238355 1.192087414203423 1.0246210659462132 1.2746940349081055 1.2567903022334126 1.186454740121118 0.9949164688943293 1.1051737768958636 1.1588016699017405 1.0 11.559816296358392 -9.746035309747214 0.590672461844431 1.006385776774427 1.1432525885842104 0.0 0.10185537252931953 0.8567073017203171 0.6328871985355651 0.051561579357523014 0.023530280408980662 1.7945877142842043e-10 9.746035309747214 0.13686681180978333 RKELEEVS(ph)PETPVVPATTQR ddPTM_A549_MK2206_60min_R1 4 RKELEEVSPETPVVPATTQR 20 2 Q15149 Q15149 PLEC Plectin 1 RKELEEVS(0.999)PET(0.001)PVVPATTQR;RKELEEVS(0.968)PET(0.032)PVVPATTQR;RKELEEVS(0.917)PET(0.083)PVVPATTQR;RKELEEVS(0.994)PET(0.006)PVVPATTQR 146.04 1.1115999999999998e-21 195941000.0 19929.0 20201.1 20478.3 19211.3 30443.7 21674.0 19954.6 20510.1 31881.3 32044.699999999997 32628.5 True False 23292.52798272966 21229.249704125563 23382.430869889307 23918.069362428017 25965.47205852553 23967.5282939632 23580.09252347388 23417.46948454693 24660.236453974543 24805.780013989282 24525.94294921158 0.9497097840830797 0.8655834251954013 0.9533754081671696 0.9752150778446174 1.0586941391935443 0.9772316743782391 0.9614346968148636 0.9548040429287435 1.0054755694833448 1.0114098391795654 1.0 14.582020984373152 -6.111873102740687 2.839867149305393 0.9972110041347044 0.9079222343647617 0.4989300627818326 0.03275072712463496 0.14567161805584736 2.247898975665797 0.00441519516545707 0.014046112776303925 7.729063889659047e-07 6.111873102740687 -0.08928876976994271 RKELEEVS(ph)PETPVVPATTQR ddPTM_A549_PD325901_60min_R1 3 RKELEEVSPETPVVPATTQR 20 2 Q15149 Q15149 PLEC Plectin 1 RKELEEVS(0.907)PET(0.093)PVVPATTQR;RKELEEVS(1)PETPVVPATTQR;RKELEEVS(0.898)PET(0.101)PVVPATTQR 119.2 8.7332e-15 114576000.0 8687.0 9261.6 9315.0 11194.699999999999 12310.0 10821.4 9679.3 10829.400000000001 12322.5 12296.8 13103.7 True False 9568.897844968598 10042.107535588022 9947.171915645413 11886.171193991639 11445.388067194544 10733.27410622374 10047.651058216199 10613.399121500055 11804.628177648052 11520.377949414984 11492.027971198222 0.8326552866866102 0.8738325002998558 0.8655715023123344 1.0342970991526677 0.9959415427702953 0.9339756336413294 0.8743148801410876 0.9235444908505077 1.0272014832572007 1.0024669256190304 1.0 13.48834578900658 -2.174313427006976 0.24345082186283887 1.0131183135869641 4.776355857665997e-16 0.41809080387413333 0.053019461333169975 27.997917370697188 0.3640755892144409 0.029341094118658748 11.500896933274623 0.006694013332251867 2.174313427006976 -1.0131183135869637 RKELEEVSPET(ph)PVVPATTQR ddPTM_A549_MK2206_60min_R1 1 RKELEEVSPETPVVPATTQR 20 2 Q15149 Q15149 PLEC Plectin 1 RKELEEVS(0.006)PET(0.994)PVVPATTQR 77.19 0.00010547 14824000.0 2088.1 1936.7 1720.4 1641.4 2388.0 1942.4 1974.4 1714.3 2761.7 2440.5 2650.8 True False 2440.5202308564285 2035.269757685473 1964.3785894609223 2043.5430736852452 2036.7283633644727 2147.943478739232 2333.1229229524424 1957.3072748235645 2136.1793595286736 1889.1893549991375 1992.533201641817 1.2248329055924776 1.0214483532863803 0.985869940757978 1.0256005129557675 1.022180389107815 1.0779963299830384 1.1709330218588 0.9823210339535488 1.0720922280082934 0.9481344418464266 1.0 10.960388048749813 -10.86280285948667 0.7772758862175536 0.9938631506721148 1.06115830409957 0.16884224289063954 0.07282331721763734 1.7330070778063975 1.5628077253737256 0.07632715415315135 0.012902896348106275 1.3715041956332222e-11 10.86280285948667 0.06729515342745518 RKELEEVSPET(ph)PVVPATTQR ddPTM_A549_PD325901_60min_R1 2 RKELEEVSPETPVVPATTQR 20 2 Q15149 Q15149 PLEC Plectin 1 RKELEEVS(0.002)PET(0.998)PVVPATTQR;RKELEEVS(0.001)PET(0.999)PVVPATTQR 91.76700000000001 1.1606e-06 41858000.0 4467.5 4297.8 4680.9 4998.1 5262.5 5439.1 5045.3 4865.6 5106.1 5708.299999999999 5713.8 True False 4921.0373112003235 4659.99068913041 4998.574022538335 5306.821285491315 4892.8801546394225 5394.805772927861 5237.301652394095 4768.551791010645 4891.508373941061 5347.876963815425 5011.038822762461 0.9820393505727179 0.9299450381351213 0.9975125316995141 1.0590261766453042 0.9764203247465761 1.0765843099083872 1.0451528790006264 0.9516094286377651 0.9761465729863363 1.0672192239906204 1.0 12.290893999677614 -5.83651111879054 9.443291243795988 1.0000158803810184 0.9560997833492272 0.14567389473350212 0.04341066509157544 0.40211550630180226 46.74011412966159 0.005446968760441589 0.01701219121328363 1.4570983996759708e-06 5.83651111879054 -0.043916097031791224 RKENGVNS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RKENGVNSPR 10 2 Q13625;Q13625-3;H7C5L8 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 RKENGVNS(1)PR;RKENGVNS(1)PR 48.659 0.010087 12115100.0 922.9200000000001 811.52 809.06 1096.82 922.63 1247.35 1117.3400000000001 1207.87 1141.66 1011.6099999999999 1071.54 True False 1016.6141589822063 879.9096384296876 863.9676768730088 1164.5680803410469 857.8276517007073 1237.1919951575742 1159.8609851319084 1183.778085294316 1093.6800004295942 947.7367719575567 939.7473730517141 1.0817951591403514 0.9363257229145415 0.9193616302085315 1.239235260173439 0.9128279325910935 1.3165155132489972 1.2342263659279007 1.2596769293966124 1.1638021363954472 1.0085016453729452 1.0 9.876129167171975 -7.2178883643205705 24.99972752757894 1.1223668233761772 1.0201978116676143 0.2102677059031196 0.12764247287677852 837.6993360464218 480867.05991793284 0.02032100515505165 0.0351968668594078 6.054964980207022e-08 7.2178883643205705 -0.10216901170856296 RKEPEPK ddPTM_A549_PD325901_60min_R1 1 RKEPEPK 7 2 P39748-2;P39748 P39748-2 FEN1 Flap endonuclease 1 0 41.983999999999995 0.034004 1610000.0 799.7 469.49 575.86 411.75 574.21 386.53 465.32 394.81 549.64 764.85 684.48 False True 880.8849552919751 509.055569975298 614.9413225274895 437.182862347902 533.8794705169603 383.3822278336131 483.02800723287413 386.93520482754656 526.5405422245867 716.5572404698825 600.2932992762169 1.4674242680270995 0.8480114147352208 1.024401443875742 0.7282820962269949 0.8893643676527244 0.6386581830846073 0.8046533383185663 0.6445769181399833 0.8771387967505967 1.19367855902081 1.0 9.229523753866594 -5.259601328308239 24.860464843534658 0.8789418390319288 1.4674244829734768 0.5423688981611212 0.15863670628017806 79.75190989045608 1078585.3387122655 0.019293164186402714 0.17183719372430425 5.500455705271688e-06 5.259601328308239 0.588482643941548 RKEPEPKGS(ph)TK ddPTM_A549_PD325901_60min_R1 1 RKEPEPKGSTK 11 3 P39748-2;P39748 P39748-2 FEN1 Flap endonuclease 1 1 RKEPEPKGS(0.991)T(0.009)K 57.678999999999995 0.0037709 7484000.0 1504.7 1368.6 1532.3 1699.1 2003.4 1757.6 1624.1 1813.9 1862.8 1916.9 2240.6 True False 1657.4560362984053 1483.9367251021172 1636.2910924684347 1804.0495480639238 1862.6880953547968 1743.286688330423 1685.9060142416206 1777.7203415229785 1784.5129940614959 1795.8666068597997 1965.0204043336419 0.8434803183941824 0.7551762423583256 0.8327094664563127 0.9180818398044549 0.9479230298305493 0.8871595859695864 0.8579585283305637 0.9046828916393982 0.9081396763748324 0.9139175363773365 1.0 10.940328577847303 -2.0000000000000586 0.03051355769623279 1.4838779705707161 1.2502104774378451e-14 0.42560273647944546 0.04681973064895838 483.98919793916514 1.1011015029832978 16.768340912627476 42.26429176695051 0.00999999999999865 2.0000000000000586 -1.4838779705707037 RKEQEEEEQKER ddPTM_A549_MK2206_60min_R1 2 RKEQEEEEQKER 12 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 0 ; 66.393 0.0015172 11642300.0 2332.3 1634.97 1995.01 1912.62 1486.1399999999999 1235.53 1352.77 1195.15 1450.22 2986.0 2916.1000000000004 False True 2725.9352207396446 1718.1829894785033 2277.9324167405452 2381.2119858607757 1267.5307746777528 1366.2729645215616 1598.5507984614953 1364.5661724933695 1121.7474855254645 2311.4605261329343 2191.951889734309 1.243610881017129 0.7838598089334742 1.0392255539042228 1.086343179799173 0.5782657824809251 0.6233133906452528 0.7292818815723455 0.6225347275568038 0.5117573477679904 1.0545215599659494 1.0 11.09800041817794 -6.751242012816178 24.98583735784894 0.7278259514757693 1.0201574435718586 0.38394591887180063 0.18644671202403595 200.12125126612455 490338.46997511544 0.029653649484707938 0.06118067807638808 1.7732010801697766e-07 6.751242012816178 0.2923314920960892 RKEQEEEEQKER ddPTM_A549_PD325901_60min_R1 1 RKEQEEEEQKER 12 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 0 48.659 0.0093174 7031400.0 791.46 1116.2 790.78 1054.8 824.95 1010.2 609.91 984.2 1100.5 794.97 973.09 False True 871.8084365579431 1210.2660913042405 844.4470861464387 1119.95260037539 767.0083579230012 1001.9732661307427 633.120458805558 964.5693589100359 1054.249812091839 744.7754585295709 853.4060989257445 1.0215634006545808 1.4181596461845145 0.9895020520821409 1.312332548109476 0.8987612801086148 1.174087304264655 0.7418747763843275 1.1302583378818387 1.2353436581000696 0.8727093226391089 1.0 9.73708861067054 -6.741629928224183 24.999485259385345 1.0791797933945386 1.1880238165531218 0.10834101406436425 0.1825983776813089 519.9027577408541 656112.5966300154 0.024384758351092956 0.05070648090934807 1.812884232721271e-07 6.741629928224183 0.10884402315858321 RKFS(ph)NSLK ddPTM_A549_MK2206_60min_R1 1 RKFSNSLK 8 2 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 RKFS(1)NSLK 104.22 0.00042702 10142000.0 1724.2 2166.0 1962.1 1392.0 2191.4 1762.9 1182.5 1690.8 2143.8 1987.9 1551.7 True False 2015.2028073572412 2276.240148265984 2240.3552838765822 1733.0400624892552 1869.047962930026 1949.448907881689 1397.3449434720742 1930.4760778578338 1658.232722945132 1538.8320093434897 1166.3700652586422 1.72775593902984 1.951559128672621 1.9207928517779511 1.4858406556455597 1.60244850121009 1.6713811216077457 1.1980288118610223 1.6551145604287705 1.4217037733880966 1.3193342792128793 1.0 10.187809883327526 -9.382611844958625 0.08112261242103201 2.3537192719624888e-17 2.686489495901738 0.5875783858585293 0.17937732628688896 6.978392344015688 0.30068798662308677 5.493401983108357 4.172158003298146 4.1436985657626603e-10 9.382611844958625 2.686489495901738 RKFS(ph)NSLK ddPTM_A549_PD325901_60min_R1 1 RKFSNSLK 8 2 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 RKFS(1)NSLK 90.82700000000001 0.00053932 13052000.0 1407.7 1806.1 1383.9 1308.8 1689.0 1810.9 2287.5 1818.2 1816.7 1701.5 1628.0 True False 1550.608667706032 1958.3063855085013 1477.8197760667401 1389.6416034995357 1570.370466733679 1796.152630801981 2374.5520642680317 1781.934574649694 1740.350416744427 1594.066999620194 1427.766320742288 1.0860381318561143 1.3715874629192741 1.035057176091974 0.9732976491398596 1.0998791916573938 1.2580158284362466 1.6631237407487767 1.248057576903254 1.2189322520506216 1.1164761182988596 1.0 10.479544160742522 -10.461434381597172 0.9722041465930542 1.0098764383644911 1.2183043681783219 0.09271491008223176 0.18096011910248833 0.7663450496218571 1.3781187265266688 0.09879215365304186 0.03448420144679064 3.455935420376166e-11 10.461434381597172 0.20842792981383074 RKGPGEGVLT(ph)LR ddPTM_A549_MK2206_60min_R1 2 RKGPGEGVLTLR 12 2 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 RKGPGEGVLT(1)LR;RKGPGEGVLT(1)LR 86.49700000000001 0.00010593 14696400.0 1161.8600000000001 810.99 882.75 741.64 1280.79 972.03 1273.17 1082.69 1441.48 1343.8 1568.42 True False 1357.9535632502525 852.2659269816393 1007.9372238122697 923.3418332934849 1092.3874876522534 1074.8895694187065 1504.4885088205835 1236.1646230990646 1114.987081570552 1040.2346466903678 1178.9380278101178 1.151844737566619 0.7229098619922598 0.854953526000444 0.7831979387488214 0.9265860137545717 0.9117439119470243 1.2761387565173186 1.0485408002278502 0.9457554640438947 0.8823488785263869 1.0 10.203272168102016 -7.539515760493473 24.97846797853304 1.0050882603558573 0.8758933022292339 0.19270808044801824 0.13655551816323486 311.5978182528258 467824.90998105553 0.019787297161165097 0.02935322056167711 2.8872489993756665e-08 7.539515760493473 -0.1291949581266234 RKGPGEGVLT(ph)LR ddPTM_A549_PD325901_60min_R1 3 RKGPGEGVLTLR 12 2 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 RKGPGEGVLT(1)LR;RKGPGEGVLT(1)LR;RKGPGEGVLT(1)LR 118.52 6.7050999999999996e-06 36445200.0 3325.64 3422.4399999999996 3443.65 3302.96 3246.86 3959.96 3219.28 4145.01 3494.41 3979.04 4143.02 True False 3663.256524593227 3710.8610298542244 3677.3567973496856 3506.976337633581 3018.8117546589187 3927.711398680555 3341.791462057611 4062.3345238525617 3347.5520998381094 3727.802735332784 3633.454804767637 1.0082020339943365 1.0213037533823233 1.012082713269047 0.9651905764816181 0.8308378435580884 1.0809853458275602 0.9197283691743406 1.1180363434057774 0.9213138128058231 1.0259664522154914 1.0 11.827126245933197 -6.249654323682446 10.919028143456922 0.9692414935002507 1.0146273944516178 0.01021075646916092 0.07556050389131513 1.0680119388579716 962.415364029213 0.009787291777407512 0.02508752648202695 5.627890984608936e-07 6.249654323682446 0.045385900951367075 RKGS(ph)DDAPYS(ph)PTAR ddPTM_A549_PD325901_60min_R1 1 RKGSDDAPYSPTAR 14 2 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 2 RKGS(1)DDAPYS(0.697)PT(0.303)AR 81.51 0.00036589 11685000.0 1978.4 1765.9 1978.7 2066.4 2729.9 2201.5 2069.7 2244.1 2164.6 2325.7 2755.6 True False 2179.245711578897 1914.7185904265896 2112.9864808897028 2194.0368348650995 2538.1612416437365 2183.5717139049993 2148.463566083296 2199.339665037606 2073.6293895992676 2178.854905093554 2416.6786691876214 0.9017523675629832 0.7922934127896415 0.8743348910345593 0.9078728019735598 1.0502684010104464 0.9035424286005793 0.8890149913085105 0.9100670656297576 0.858049278970269 0.9015906553377189 1.0 11.238809944282762 -10.924882503595374 1.1442918368870103 1.0008019876863834 0.8961647398200406 0.00994723454488533 0.0644740648735545 0.5358749126915143 1.2308186146893478 0.04490905223656443 0.010261261680848087 1.1888238148305115e-11 10.924882503595374 -0.10463724786634276 RKGS(ph)DDAPYSPTAR ddPTM_A549_MK2206_60min_R1 2 RKGSDDAPYSPTAR 14 2 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 RKGS(0.997)DDAPY(0.002)S(0.002)PTAR;RKGS(1)DDAPYSPTAR 94.85600000000001 1.7144e-05 19354400.0 5889.5 5512.299999999999 4537.2 4751.0 6227.8 5134.7 5520.5 5620.4 7363.0 7124.6 7075.4 True False 6883.503615549514 5792.852525063061 5180.643185365083 5914.9952132804965 5311.698869916772 5678.050545861989 6523.503391490561 6417.10891175312 5695.2922562949025 5515.147911750402 5318.382908894117 1.2942850737651836 1.0892131357024843 0.9741012022096629 1.112179268511984 0.9987432196793942 1.0676272549624788 1.2265952834236662 1.206590240244185 1.0708691634012413 1.036997148612077 1.0 12.376771935659058 -9.580665373834705 1.403824836509472 1.0169868930707215 1.1112331670900322 0.14356214037664672 0.09141020835461072 0.5005381962403613 2.009050531470653 0.023292916383961502 0.017728916457159367 2.6262412966412653e-10 9.580665373834705 0.09424627401931063 RKGS(ph)DDAPYSPTAR ddPTM_A549_PD325901_60min_R1 2 RKGSDDAPYSPTAR 14 2 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 RKGS(1)DDAPYSPTAR;RKGS(0.978)DDAPY(0.002)S(0.009)PT(0.011)AR 78.021 0.00022327 27866000.0 2758.9 2971.5 3278.6 3153.0 4038.8 3736.3999999999996 3411.2 3255.8999999999996 4142.9 4207.6 3914.3 True False 3038.9814970051666 3221.918733480156 3501.105511823411 3347.753649017452 3755.1286211036013 3705.9719971994705 3541.015082680263 3190.9585202958624 3968.7883203228303 3941.93141792649 3432.865914792099 0.8852607624172858 0.938550707616345 1.0198783170461945 0.9752066442770453 1.093875704530982 1.0795562917941441 1.031504046639909 0.9295319419689927 1.1561151582476497 1.1482916943947172 1.0 11.745197792454682 -5.2790998232774715 0.7029955162434555 1.0628109040154232 0.7704072599558297 0.4369482998291577 0.06374026930956338 2.174410876007836 0.7505965500598571 0.011620246400810087 0.5013615597492624 5.258963743794651e-06 5.2790998232774715 -0.2924036440595935 RKGS(ph)DDDGGDSPVQDIDTPEVDLYQLQVNTLR ddPTM_A549_PD325901_60min_R1 1 RKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLR 32 2 O75446 O75446 SAP30 Histone deacetylase complex subunit SAP30 1 RKGS(0.937)DDDGGDS(0.063)PVQDIDTPEVDLYQLQVNTLR 60.632 0.00029323 2695900.0 358.71 678.59 722.46 973.97 1163.7 877.97 916.18 1097.3 862.43 802.85 927.91 True False 395.12597513165485 735.7771608118126 771.4904801049048 1034.12991485364 1081.9657265470585 870.8201034100259 951.0457312529327 1075.4134906848028 826.1850662811128 752.1579139847622 813.7829525061278 0.485542212348912 0.9041442297923685 0.9480297881996925 1.2707687125528142 1.32955073980726 1.0700888986777695 1.1686724676697762 1.3214991631035733 1.015240075669798 0.9242733724863799 1.0 9.668500248273748 -5.237221588241262 1.6550986057531893 1.0809524971514972 0.25281140108728495 0.6386457825104572 0.1384779205063257 0.5811737868143293 1.4371770655655527 0.021366664864871338 0.7797553904885505 5.791331323762591e-06 5.237221588241262 -0.8281410960642123 RKGS(ph)GS(ph)EQEGEDEEGGER ddPTM_A549_MK2206_60min_R1 2 RKGSGSEQEGEDEEGGER 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 RKGS(1)GS(1)EQEGEDEEGGER;RKGS(1)GS(1)EQEGEDEEGGER 88.976 5.5372e-06 191521000.0 7621.5 6924.4 6741.3 4713.799999999999 6776.0 4531.299999999999 3403.7 4487.0 6272.799999999999 10006.5 9480.400000000001 True False 8907.822872215069 7276.822383496298 7697.317708168402 5868.681211610522 5779.259376112922 5010.799158366496 4022.108231793571 5123.045990861191 4852.020815603238 7746.024700183931 7126.1550342708215 1.2500181134673496 1.021142867156397 1.0801501891483931 0.8235410517154192 0.8109926528849762 0.7031560686329107 0.5644149211532177 0.7189074565770239 0.680875000932353 1.0869851501871706 1.0 12.798908155270635 -6.063261215272849 1.5112527301976284 0.7993886490905262 1.1734289880987656 0.490671128170435 0.14566099991067896 0.32290645939293355 1.3261642050304498 0.023061578407621203 0.11346528645249629 8.644478226082767e-07 6.063261215272849 0.3740403390082394 RKGS(ph)GS(ph)EQEGEDEEGGER ddPTM_A549_PD325901_60min_R1 2 RKGSGSEQEGEDEEGGER 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 RKGS(1)GS(1)EQEGEDEEGGER;RKGS(1)GS(1)EQEGEDEEGGER 149.41 3.8290999999999994e-17 351420000.0 17216.699999999997 17201.5 18385.800000000003 15019.5 20491.8 18054.6 17381.300000000003 19442.2 17646.3 20102.4 19512.6 True False 18964.526709735335 18651.130773669498 19633.57095079694 15947.2204032406 19052.52666087223 17907.569323583546 18042.754882912323 19054.410068889152 16904.687377661245 18833.131033302943 17112.673900562622 1.1082152806705343 1.0899016063793687 1.1473116980363565 0.9318953014535207 1.113357665294249 1.0464506848923703 1.0543504181610754 1.1134677245420244 0.9878460535092333 1.1005370138376656 1.0 14.06277758190652 -7.07753270892477 0.2403825805667909 0.9794387641612482 1.1403088061416484 0.0 0.06562493599454323 3.768828085093494 0.3869464478456653 0.052012582891804826 0.1856647457426809 8.365025921214709e-08 7.07753270892477 0.16087004198040022 RKGS(ph)GS(ph)EQEGEDEEGGERK ddPTM_A549_PD325901_60min_R1 2 RKGSGSEQEGEDEEGGERK 19 3 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 RKGS(1)GS(1)EQEGEDEEGGERK;RKGS(1)GS(1)EQEGEDEEGGERK 45.70399999999999 0.010414 26990000.0 3067.1000000000004 2784.2 3433.3 3288.5 4177.9 3684.9 4005.1 3196.4 3970.2 3943.8999999999996 4562.1 True False 3378.469734120318 3018.8343051507495 3666.3043841100807 3491.6231762746233 3884.4587169725482 3654.8913961247026 4157.516272174816 3132.6452944727107 3803.3463007424034 3694.881480929816 4000.990621534638 0.8444083112657877 0.7545217149228987 0.9163491572254214 0.8726896677741675 0.9708742370114848 0.913496616676101 1.039121723954489 0.7829674175219984 0.950601153692176 0.9234916625504587 1.0 11.966141531620702 -2.0000000000000027 0.1812240329953722 0.9983910940575912 0.15271417470775936 0.2451435164891601 0.07231714771901412 37.57845150799964 0.3961306062831484 0.06867426373441685 8.866914127084232 0.00999999999999994 2.0000000000000027 -0.8456769193498318 RKGS(ph)GSEQEGEDEEGGER ddPTM_A549_MK2206_60min_R1 3 RKGSGSEQEGEDEEGGER 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RKGS(0.887)GS(0.113)EQEGEDEEGGER;RKGS(0.5)GS(0.5)EQEGEDEEGGER;RKGS(0.98)GS(0.02)EQEGEDEEGGER 78.48899999999999 0.00011812 19225300.0 1643.92 1615.17 1631.38 1425.73 1900.1399999999999 1330.99 887.2 1208.62 2134.87 2298.75 2035.01 True False 1921.373506014799 1697.3752540511418 1862.7342148772143 1775.0339140034528 1620.6319231002367 1471.8344783603422 1048.3927558971873 1379.9455862435143 1651.3253536868517 1779.4607784487876 1529.6608535812277 1.256078104840362 1.1096415588313335 1.2177432732989135 1.1604101064937107 1.059471398059268 0.9621966038514336 0.6853759468595277 0.9021251887389277 1.0795369116106908 1.1633041234484955 1.0 10.578996108107457 -6.851587145371003 2.9174713414328877 0.993535149245649 1.1859131407734707 0.42345267439634593 0.11785152279105335 0.2319921013422321 3.9897772748616904 0.017986858488832982 0.03695942443730337 1.407384794711433e-07 6.851587145371003 0.19237799152782165 RKGS(ph)GSEQEGEDEEGGER ddPTM_A549_PD325901_60min_R1 3 RKGSGSEQEGEDEEGGER 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RKGS(0.998)GS(0.002)EQEGEDEEGGER;RKGS(0.5)GS(0.5)EQEGEDEEGGER;RKGS(0.98)GS(0.02)EQEGEDEEGGER 117.64 1.4496e-10 34239600.0 2364.42 2573.54 2061.81 2337.15 3083.4100000000003 2802.62 2390.79 2644.52 2761.58 2934.4300000000003 2568.88 True False 2604.454177805993 2790.421247639414 2201.736825270733 2481.510447447234 2866.8419187870313 2779.7963919256977 2481.7728217404865 2591.772974014195 2645.520396253139 2749.1495890070446 2252.9240454720193 1.156032837875954 1.2385775957461458 0.9772796511697037 1.1014620987487942 1.2724982560103963 1.2338615664884927 1.1015785581979174 1.1504040623221197 1.1742608018988343 1.2202584434803079 1.0 11.137582960389004 -10.73848645388278 0.7975563376622392 0.9907253202038478 1.1571063862223456 0.0 0.10045367013335675 0.6716936011411837 0.6896951645718649 0.07139980289592393 0.01477443230130575 1.826053704787736e-11 10.73848645388278 0.16638106601849778 RKGS(ph)LDVK ddPTM_A549_MK2206_60min_R1 6 RKGSLDVK 8 2 O60658-6;O60658-2;O60658 O60658-6 PDE8A High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A 1 RKGS(1)LDVK;RKGS(1)LDVK;RKGS(1)LDVK;RKGS(1)LDVK;RKGS(1)LDVK;RKGS(1)LDVK 60.518 0.0023141999999999998 29306300.0 8444.550000000001 8768.45 8592.48 7735.969999999999 11491.689999999999 9160.970000000001 9401.23 9622.71 13505.199999999999 13078.200000000003 12218.710000000001 True False 9869.783590574525 9214.726651921916 9811.022868153434 9631.282997280883 9801.277623949689 10130.377764840277 11109.311799507796 10986.75861081343 10446.293763372798 10123.825536795632 9184.467087759502 1.0746169044177176 1.0032946456090786 1.0682190675198746 1.0486490838555969 1.0671580103991265 1.1029902625859946 1.2095760911717577 1.1962325637222775 1.1373870322095205 1.1022768594040746 1.0 13.164980298633317 -6.991780219955199 3.517397179884627 1.0916768899656046 1.0470898249206613 0.17049652047825714 0.05932511313528614 0.5802453521099303 15.371523685409494 0.01173252140726898 0.022345591280901498 1.0191069891608986e-07 6.991780219955199 -0.044587065044943364 RKGS(ph)LDVK ddPTM_A549_PD325901_60min_R1 4 RKGSLDVK 8 2 O60658-6;O60658-2;O60658 O60658-6 PDE8A High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A 1 RKGS(1)LDVK;RKGS(1)LDVK;RKGS(1)LDVK;RKGS(1)LDVK 73.885 0.0010534000000000001 90678000.0 10632.6 9518.5 10028.1 10251.3 11310.199999999999 10351.6 11251.599999999999 12023.0 11165.599999999999 11390.3 11292.6 True False 11712.013724693576 10320.65740017865 10708.667169864062 10884.4995186085 10515.810570071795 10267.300001662048 11679.78579511177 11783.191833138962 10696.348661419934 10671.114514119246 9903.681789689406 1.1825918858668096 1.0421030904812947 1.08128142616746 1.0990356667093455 1.0618082035935028 1.0367154579169942 1.1793377496509876 1.1897789209469845 1.0800375949634975 1.0774896387754305 1.0 13.273749245436779 -10.00284411818701 1.0189791104419317 1.0100836964323712 1.1028969601116743 0.13402725682319827 0.05667780737154434 0.40481304305837407 0.8491558941705646 0.019552979447914468 0.01043498740936302 9.934725726752139e-11 10.00284411818701 0.09281326367930309 RKGS(ph)SSQAPASK ddPTM_A549_MK2206_60min_R1 3 RKGSSSQAPASK 12 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RKGS(0.828)S(0.144)S(0.028)QAPASK;RKGS(0.805)S(0.162)S(0.033)QAPASK;RKGS(0.86)S(0.122)S(0.018)QAPASK 106.52 2.9821999999999997e-05 47358400.0 5364.700000000001 4761.099999999999 3467.2700000000004 2280.27 5369.2 4179.5 4266.389999999999 3715.46 5107.3 5539.799999999999 5395.599999999999 True False 6270.130205677645 5003.419653697683 3958.981022948252 2838.9362523652094 4579.3977925362315 4621.771915872437 5041.537837953338 4242.137833119039 3950.5047046821855 4288.355332441803 4055.723609015617 1.545995440058968 1.2336687940409445 0.9761466521406161 0.6999826728957648 1.1291197906969104 1.1395677717284605 1.2430674089196605 1.045963246531158 0.9740566876649246 1.0573588700445613 1.0 11.985743623026709 -5.434323820009468 2.6757701819473354 1.0087130095139536 1.5649191183366125 0.5723878338296071 0.13157518444247482 0.1775089435499821 2.0437120581767476 0.018664202824695518 0.18074252711896638 3.6785459047213727e-06 5.434323820009468 0.5562061088226589 RKGS(ph)SSQAPASK ddPTM_A549_PD325901_60min_R1 2 RKGSSSQAPASK 12 2 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RKGS(0.837)S(0.139)S(0.024)QAPASK;RKGS(0.838)S(0.158)S(0.004)QAPASK 107.35 2.7105e-05 16597300.0 2487.5 2222.98 1639.08 1598.73 2060.8 2419.1000000000004 2049.4 2568.2 3990.8 9053.3 10467.0 True False 2740.029168799285 2410.31832614899 1750.317825388738 1697.4799211207317 1916.0565173740467 2399.3996516500492 2127.3910384747114 2516.975236286075 3823.0805543808347 8481.673092954159 9179.625355779803 0.29849030462600196 0.26257262499622297 0.19067421137036694 0.1849182134706555 0.20872927195962662 0.2613831783602482 0.23175140117621837 0.2741914989701951 0.4164745734392846 0.9239672387734006 1.0 13.164219559391805 -10.161076112530669 0.500782563030879 1.0649026328036224 0.21147911363743888 0.9755647488872503 0.04350567501623993 0.11942839523463784 0.05346977647024024 0.046404973641326445 0.012746663394679216 6.901188460636828e-11 10.161076112530669 -0.8534235191661835 RKGS(ph)STDYQESMDTDKDDPHGR ddPTM_A549_MK2206_60min_R1 1 RKGSSTDYQESMDTDKDDPHGR 22 3 E9PKG7;E9PL54;A0A669KBF4;O00327-3;O00327-5;O00327-4;O00327-6;O00327-8;O00327 E9PKG7 ARNTL Aryl hydrocarbon receptor nuclear translocator-like protein 1 1 RKGS(0.324)S(0.324)T(0.324)DY(0.027)QESMDTDKDDPHGR 59.912 0.00031704 3480800.0 241.22 212.88 404.59 112.56 199.47 111.35 159.67 338.88 323.74 282.27 286.73 True False 281.9320387372196 223.71468271600318 461.9669457742351 140.13720505301046 170.12822723631123 123.13298309185208 188.67997219804315 386.91727777647424 250.41340690654775 218.5050109549709 215.52702765457911 1.3081052608820203 1.0379889944686949 2.143429298874851 0.6502071066353942 0.789359130906646 0.5713110992705512 0.8754353189542278 1.7952146512064318 1.1618654496914436 1.0138172150973312 1.0 7.751724988176035 -6.294516497525238 24.993096243180204 1.0355264624790832 1.4506569554131998 0.24213907407421453 0.39491835145517457 790.8523448180723 597567.2830306893 0.05535543295379925 0.12864147932266773 5.075554581759967e-07 6.294516497525238 0.41513049293411663 RKGSGS(ph)EQEGEDEEGGER ddPTM_A549_PD325901_60min_R1 1 RKGSGSEQEGEDEEGGER 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RKGS(0.145)GS(0.855)EQEGEDEEGGER 140.17 2.0506e-14 8838300.0 1137.2 1235.0 1051.9 856.94 1239.0 1159.9 1078.3 1394.9 1129.6 1279.7 1035.1 True False 1252.6477068376073 1339.0777842328766 1123.2882595885567 909.8712375480537 1151.976914317957 1150.4541589636196 1119.3352965684012 1367.0776252221185 1082.1268402898138 1198.8995236050312 907.7892620395215 1.3798882176941547 1.4750976247773446 1.2373887933691523 1.0022934568578776 1.2689915627882855 1.2673141301307147 1.2330342992310805 1.5059416126499647 1.1920463102401209 1.3206804417486444 1.0 9.826213612954746 -9.78950517456891 0.9427819963183489 1.026871732379001 1.2848376498503398 0.0 0.15800301200914596 0.3819256372294159 0.7014796608548444 0.04690087365902177 0.027699606570620015 1.6236590046564862e-10 9.78950517456891 0.2579659174713387 RKGTDVPK ddPTM_A549_MK2206_60min_R1 2 RKGTDVPK 8 2 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 60.59 0.0037421999999999998 6511000.0 2066.2599999999998 2381.2 2403.8999999999996 1632.2199999999998 3105.0 2500.6000000000004 2009.75 1956.8899999999999 3275.8 4008.3999999999996 3333.5 False True 2414.9941727931628 2502.392909072466 2744.809167173394 2032.11397327314 2648.2586131686285 2765.2118322360607 2374.8955603746303 2234.2851502242834 2533.8365303776777 3102.8996560452965 2505.6999500803527 0.9638002238519097 0.9986801927310648 1.0954261171954662 0.8109965334069524 1.056893748624493 1.1035686184801918 0.9477972653104264 0.8916810451118197 1.0112290301543976 1.2383364799707135 1.0 11.290997951337774 -6.690745285925666 0.0031891812889573885 1.5743029417289396 0.408055440210981 0.00700305940450896 0.10842086784513524 282673.1590109201 222.49519641645895 40106.9828542237 41260.08577310816 2.0382371549987873e-07 6.690745285925666 -1.1662475015179585 RKGTDVPK ddPTM_A549_PD325901_60min_R1 2 RKGTDVPK 8 2 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 73.26 0.0017553 8259900.0 2460.8 3118.8 2431.53 2146.3 3315.5 3049.0 2591.7 2953.8999999999996 3409.7 3555.8 3193.6 False True 2710.618604454788 3381.632221429552 2596.5482477777036 2278.8720763990327 3082.630717854064 3024.169954892727 2690.328561732657 2894.9821472102794 3266.4021665511527 3331.2861811633775 2800.8074458983847 0.9677989854048435 1.2073776176158595 0.9270713170875754 0.8136482498060711 1.100622151789975 1.0797493270454717 0.9605546306556998 1.0336241255891432 1.166235890773071 1.1894020726208248 1.0 11.451627086926173 -8.535015827316196 24.559264533919304 1.079628163219271 1.0104683568677775 0.14177543537372062 0.10770242957026425 387.5803116345388 784260.9312745424 0.018803068262094907 0.02132885810231912 2.917320693980152e-09 8.535015827316196 -0.06915980635149355 RKIS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 RKISPSK 7 2 P35251-2;P35251 P35251-2 RFC1 Replication factor C subunit 1 1 RKIS(0.979)PS(0.021)K 54.982 0.0084515 7677900.0 1934.8 1498.0 1030.6 857.2 1741.8 1759.9 1436.8 1348.5 1755.1 1863.4 1416.2 True False 2261.3469386815873 1574.2418015246737 1176.7545770160573 1067.2140384811698 1485.5835273485075 1946.1314498729262 1697.8479617595567 1539.6540046080493 1357.5726523187802 1442.4566458124943 1064.5184548683956 2.1242909677513797 1.4788299764322022 1.1054337025669858 1.0025322093764053 1.3955451129611158 1.8281800949270746 1.5949446005325087 1.4463384806216384 1.275292735518253 1.3550320703372143 1.0 10.055985245740528 -9.4522771834363 0.9057646944842137 1.0510195149103874 1.4767767398068592 0.11640721165870915 0.30692784188328526 0.5153154496776435 0.8971395171921264 0.09226524743946293 0.0659396914766331 3.5295782663263457e-10 9.4522771834363 0.42575722489647183 RKIS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 RKISPSK 7 2 P35251-2;P35251 P35251-2 RFC1 Replication factor C subunit 1 1 RKIS(0.956)PS(0.044)K;RKIS(0.916)PS(0.084)K 53.683 0.014544 22868000.0 8306.9 9466.0 9135.1 8273.8 8929.6 9083.2 6897.5 8348.4 9281.4 11366.4 10171.099999999999 True False 9150.210372783431 10263.733040929887 9755.062819818837 8784.853834836844 8302.415701447637 9009.229430725363 7159.988136956825 8181.884612806893 8891.335034937927 10648.72356419804 8920.119179915155 1.0257946321374671 1.150627344087516 1.0936022964562704 0.9848359262527704 0.9307516563390363 1.009989804958083 0.8026785284526802 0.9172393829927187 0.996773121031607 1.1937871399941684 1.0 13.122847270494207 -6.274986906427387 5.284532680188644 0.973671522342981 1.0968614035764905 0.22021172749147355 0.0920654240320468 0.13725607589015984 12.725006693468014 0.009513417517838402 0.023717592185916115 5.309004501419457e-07 6.274986906427387 0.12318988123350949 RKKS(ph)EPDDELLFDFLNSSQK ddPTM_A549_MK2206_60min_R1 2 RKKSEPDDELLFDFLNSSQK 20 3 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 RKKS(1)EPDDELLFDFLNSSQK;RKKS(1)EPDDELLFDFLNSSQK 250.06 8.279399999999999e-98 32341000.0 9446.6 9911.7 9557.0 7918.6 15603.900000000001 12982.900000000001 11898.6 13026.900000000001 16880.6 10443.8 10316.7 True False 11040.95513280415 10416.163193706354 10912.326307531977 9858.657355479465 13308.586980361346 14356.741860648455 14060.421602026905 14873.502968208073 13057.171052778996 8084.538326465891 7754.778663565014 1.4237614781552543 1.3431928421949122 1.4071744379762068 1.2713009336809697 1.716178830853071 1.8513412804548568 1.8131299695358516 1.9179790440815048 1.6837580567098192 1.0425234139112465 1.0 12.920869889194362 RKLS(ph)GDQPAAR ddPTM_A549_MK2206_60min_R1 6 RKLSGDQPAAR 11 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 RKLS(1)GDQPAAR;RKLS(1)GDQPAAR;RKLS(1)GDQPAAR;RKLS(1)GDQPAAR;RKLS(1)GDQPAAR;RKLS(1)GDQPAAR 127.03 9.3478e-08 112382200.0 9049.800000000001 10989.28 10176.229999999998 8964.05 12696.039999999999 9200.310000000001 9378.23 7879.32 13035.0 14116.39 14376.62 True False 10577.184993632743 11548.587412990033 11619.372432823708 11160.242652411489 10828.469334342486 10173.880697528499 11082.132997224615 8996.237739405477 10082.593312617684 10927.48769474136 10806.508479473285 0.9787791323834024 1.0686696295039522 1.0752198506015556 1.032733437780585 1.0020321878163438 0.9414586327168994 1.025505418172287 0.8324832906478188 0.9330111878197606 1.0111950326507282 1.0 13.39961285146508 -6.951845130426399 2.4842372510627757 0.9593086404595013 1.0445439691303602 0.3330769890717059 0.05381264784459206 0.25569400515643415 3.190417413491053 0.008064202931118565 0.016280743409766905 1.1172615926504129e-07 6.951845130426399 0.08523532867085892 RKLS(ph)GDQPAAR ddPTM_A549_PD325901_60min_R1 4 RKLSGDQPAAR 11 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 RKLS(1)GDQPAAR;RKLS(1)GDQPAAR;RKLS(1)GDQPAAR;RKLS(1)GDQPAAR 115.12 4.4301e-06 163378000.0 10820.18 11316.93 10705.759999999998 11311.24 13125.619999999999 12797.869999999999 11754.98 14723.77 14470.15 13926.85 15386.85 True False 11918.636708204478 12270.647407869292 11432.317252564677 12009.9096051101 12203.721732130798 12693.648389840277 12202.322196471872 14430.092856775893 13862.019916802104 13047.506314228913 13494.36499527854 0.8832306457083839 0.9093164007467259 0.8471919394921258 0.8899944242883733 0.9043568731393202 0.9406628910868781 0.9042531605408085 1.0693421188640406 1.0272450701942775 0.9668855347246073 1.0 13.720069469009482 -8.207103001991907 8.889952775771892 1.0174378277140277 0.8971026975161891 0.7734523347935472 0.030943125469040243 0.13387446061586475 21.016107334645497 0.004608876586781179 0.005948906590773512 6.207217996533499e-09 8.207103001991907 -0.12033513019783859 RKPAAPPPS(ph)PAAR ddPTM_A549_MK2206_60min_R1 2 RKPAAPPPSPAAR 13 2 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 RKPAAPPPS(1)PAAR;RKPAAPPPS(1)PAAR 63.631 0.0013161 7948000.0 1247.27 1422.06 1216.37 1064.0 1368.28 1222.7 1017.96 1100.97 1492.42 2057.58 1976.35 True False 1457.7786831762369 1494.436779890641 1388.8695564186116 1324.6800477647744 1167.0078245495558 1352.085302437428 1202.9101553123323 1257.035869079216 1154.3892529050163 1592.771248948627 1485.5677505148665 0.9812939750953812 1.0059701278334163 0.934908257087069 0.8916995184539165 0.7855635154607358 0.9101471824282829 0.8097309294008497 0.846165291783935 0.7770694083153927 1.0721633182980757 1.0 10.536798686606165 -6.042379034261394 2.651830020165363 0.8762026310279019 0.9933451652049219 0.18608733046952886 0.08468669597189839 0.3257478647991389 4.490330311830212 0.012282429806019795 0.04267155407907115 9.07028567613241e-07 6.042379034261394 0.11714253417702003 RKPAAPPPS(ph)PAAR ddPTM_A549_PD325901_60min_R1 2 RKPAAPPPSPAAR 13 2 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 RKPAAPPPS(1)PAAR;RKPAAPPPS(1)PAAR 53.777 0.0043667 5423500.0 1062.67 1074.23 945.4100000000001 657.3199999999999 1492.0 1177.26 738.25 1055.32 888.6800000000001 1271.0 1531.96 True False 1170.5514761036936 1164.7591321105122 1009.5712078121667 697.9211635179669 1387.2070671205734 1167.6727848793087 766.3445077359012 1034.2708147174762 851.3318700679469 1190.748843089783 1343.5386318945668 0.8712451196532113 0.8669338599278296 0.7514270031733572 0.519464901827055 1.032502552728557 0.869102500783871 0.5703926106354339 0.7698109977373839 0.6336489698606258 0.886278082983494 1.0 10.39182208963164 -10.994938143250776 1.2842306702990771 0.9994043375527744 0.7519719648743437 0.16672222812662585 0.14514865935036178 0.4714876566266514 1.389303938465246 0.10081282737230497 0.023272824629969307 1.0117235442163503e-11 10.994938143250776 -0.24743237267843066 RKPAMTT(ph)PTR ddPTM_A549_MK2206_60min_R1 3 RKPAMTTPTR 10 2 F8VXG7;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 RKPAMT(0.074)T(0.914)PT(0.011)R;RKPAMT(0.213)T(0.783)PT(0.004)R;RKPAMT(0.149)T(0.832)PT(0.019)R 62.924 0.0023464000000000002 31974700.0 3289.63 3811.9299999999994 3632.34 2975.5099999999998 4874.889999999999 3936.78 2906.69 4138.6900000000005 5299.8 5333.1900000000005 5607.5 True False 3844.8391202683006 4005.9409549305446 4147.46043108724 3704.5100835757207 4157.800138727734 4353.367446576931 3434.7979481952143 4725.361981706555 4099.403762041518 4128.418674938684 4215.002990873131 0.9121794524449076 0.9504005011632792 0.9839756792742157 0.8788867034251706 0.9864287517068765 1.0328266565891897 0.8148981046117125 1.1210815251942925 0.9725743423950296 0.9794580653627218 1.0 12.04131793953438 -7.490419034357596 0.6648201772529226 0.9925397087949945 0.9367994486224823 0.09776431033516741 0.07256187384858372 1.4041653571373782 1.2288196482008822 0.01411800118581137 0.03362637077550455 3.232815841985933e-08 7.490419034357596 -0.05574026017251221 RKPAMTT(ph)PTR ddPTM_A549_PD325901_60min_R1 1 RKPAMTTPTR 10 2 F8VXG7;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 RKPAMT(0.141)T(0.649)PT(0.21)R 54.343 0.0066923 6436900.0 805.08 847.62 691.08 811.87 1262.2 882.58 775.28 792.22 778.19 999.79 1309.6 True False 886.8111289314286 919.0519121226483 737.980844601635 862.0173660094503 1173.547426353612 875.3925610984659 804.783704649494 776.4185506154327 745.4853805286212 936.6630887747708 1148.5275022383903 0.772128771146623 0.8002001783426936 0.6425452095516808 0.7505413360406659 1.0217843491483312 0.7621868517666266 0.7007091280627007 0.6760121539120775 0.6490792593784028 0.8155338787702407 1.0 10.165569688063066 -10.92644567842612 1.194999524635511 0.9993647534933807 0.7462636660767241 0.16031682769331934 0.11151262195320182 0.35827654483194094 0.9127537620667512 0.07378484915737504 0.017581618352650097 1.1845525216155623e-11 10.92644567842612 -0.2531010874166566 RKPDTIEVQQMK ddPTM_A549_PD325901_60min_R1 2 RKPDTIEVQQMK 12 2 E7EQR4;P15311;P26038;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y7M3;P35241-4 E7EQR4;P26038;A0A2R8Y5S7 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ; 72.089 0.00073717 21680000.0 2792.8 3151.0 2776.8 3104.7 3853.3999999999996 3928.0 3036.1 4050.7 4047.7 3775.1000000000004 3870.2 False True 3076.3230000493045 3416.5458284354613 2965.2503462548775 3296.470267714708 3582.750477508324 3896.0116703242475 3151.6404469176678 3969.905610787322 3877.589245255916 3536.7395417374046 3394.1899352191667 0.9063496913146856 1.006586518033161 0.8736253429681471 0.9712097232713793 1.0555539159233827 1.147847275692507 0.9285398009743856 1.1696179903176163 1.1424196404039881 1.041998123039344 1.0 11.728851583464804 -6.707925296396099 3.6221952561357824 1.0718526916718534 0.9350582043484583 0.437471095991664 0.07189704045704844 0.18298544285154902 4.892522988777702 0.011192707539741064 0.02386049980080128 1.959181646110672e-07 6.707925296396099 -0.13679448732339505 RKPEDVLDDDDAGS(ph)APLK ddPTM_A549_MK2206_60min_R1 2 RKPEDVLDDDDAGSAPLK 18 2 A0A087WUV8;P35613-3;P35613-4;P35613-2;P35613 A0A087WUV8 BSG Basigin 1 RKPEDVLDDDDAGS(1)APLK;RKPEDVLDDDDAGS(1)APLK 169.08 1.0786e-30 59939000.0 13507.0 13401.6 12376.400000000001 11361.9 16025.5 13928.4 11609.0 11906.5 17370.9 16505.9 18810.1 True False 15786.651385555198 14083.684197138233 14131.55962253205 14145.566010055078 13668.170178851482 15402.294043076361 13718.205030670031 13594.282837126986 13436.418885627212 12777.205726154583 14139.033037650059 1.1165297756584758 0.9960853871432056 0.9994714337891347 1.0004620522766743 0.9666976618878574 1.0893456435148312 0.9702364365470094 0.9614718913894262 0.9503067748585144 0.9036831367555943 1.0 13.78739583778101 RKPEDVLDDDDAGS(ph)APLK ddPTM_A549_PD325901_60min_R1 3 RKPEDVLDDDDAGSAPLK 18 2 A0A087WUV8;P35613-3;P35613-4;P35613-2;P35613 A0A087WUV8 BSG Basigin 1 RKPEDVLDDDDAGS(1)APLK;RKPEDVLDDDDAGS(1)APLK;RKPEDVLDDDDAGS(1)APLK 230.86 6.549999999999999e-65 274477000.0 15867.0 16959.8 15873.4 15693.8 18896.7 15200.7 16042.2 16731.3 17747.0 16684.7 19920.4 True False 17477.80615933196 18389.06186642328 16950.664378508412 16663.17038279419 17569.46098207596 15076.910538976017 16652.69469962867 16397.58109604907 17001.15530685493 15631.225194571292 17470.31708581981 1.0004286741605983 1.05258890128269 0.9702551072909155 0.9537989666094406 1.005674991230504 0.8630015394061475 0.953199339074688 0.9385966502782339 0.9731452052838991 0.8947304801501709 1.0 14.092618172920798 -5.7785586897050845 24.745054843974472 0.9714077434623504 1.0265087801401738 0.19469398122873072 0.04543321352638646 214.21598362079786 309639.3989198835 0.005703531276783594 0.017795996441876242 1.665103793716889e-06 5.7785586897050845 0.0551010366778234 RKPEEES(ph)PR ddPTM_A549_MK2206_60min_R1 2 RKPEEESPR 9 2 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 RKPEEES(1)PR;RKPEEES(1)PR 43.544 0.021873 43791000.0 2139.17 2530.13 1845.92 1884.0300000000002 2362.6000000000004 1916.71 1654.67 1447.74 2116.59 3057.5 3172.5 True False 2500.209598314806 2658.9028099410043 2107.699212891015 2345.6174345773215 2015.0646697172963 2119.5349799908745 1955.3021206045987 1652.9615785178032 1637.1857444996906 2366.8086264740273 2384.6806934543024 1.0484462784378714 1.1149932220441139 0.8838496569693493 0.9836190820078322 0.8450039769468662 0.8888129072411141 0.8199429491636752 0.6931584522217205 0.6865429610738214 0.992505467491169 1.0 11.219580388289213 -6.072877281522252 0.9237467447992543 0.8349387489983712 1.1052988732403746 0.38086947884260813 0.10386853375934726 0.7915851632507372 0.9780938805044196 0.02020013573972882 0.16111411222597122 8.455177291307803e-07 6.072877281522252 0.2703601242420034 RKPEEES(ph)PR ddPTM_A549_PD325901_60min_R1 4 RKPEEESPR 9 2 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR 120.86 2.7539000000000002e-05 156200000.0 8612.1 7458.4 8303.2 7621.700000000001 8963.400000000001 8361.2 7356.3 7689.5 8685.300000000001 9457.4 9680.8 True False 9486.394052107073 8086.945543257074 8866.705083197741 8092.475098863397 8333.84170605131 8293.109159347026 7636.2480220218185 7536.126890203943 8320.287044944342 8860.258149990015 8490.122971647383 1.11734471736001 0.952512180361025 1.0443553188579187 0.9531634731190675 0.981592579269114 0.9767949400782202 0.8994272577114532 0.8876345979169803 0.9799960580935982 1.0435959737660683 1.0 13.051569734706717 -5.255459671248196 24.466684402696465 0.9760834097075373 1.1173448017815413 0.4363128456423675 0.047306981435824194 352.400972716934 1441832.301134291 0.006144849183391052 0.07718846655195913 5.553161815985335e-06 5.255459671248196 0.141261392074004 RKPEEES(ph)PRK ddPTM_A549_MK2206_60min_R1 1 RKPEEESPRK 10 3 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 RKPEEES(1)PRK 41.54 0.025807999999999998 2054500.0 1368.8 1133.7 1024.8 991.97 1046.6 666.38 818.51 816.61 1023.3 1492.6 1921.4 True False 1599.8199760530065 1191.4004875757832 1170.1320498021119 1235.0026945312256 892.6465264226364 736.8958892927562 967.2226720349496 932.3669682632403 791.5241838743133 1155.4206233442794 1444.2633520577153 1.1077065507295893 0.8249191436439445 0.8101929943281918 0.8551090718819768 0.6180635444019524 0.5102226600452495 0.66969965737682 0.6455657598282541 0.5480469907005454 0.8000068835770796 1.0 10.496118116960627 -3.0146621064763526 5.349175087894424 0.7635744999405913 1.0599887106760513 0.0 0.17697392726056066 0.0 0.0 0.027699410060374036 0.0 0.0009668027866585151 3.0146621064763526 0.2964142107354599 RKPEEES(ph)PRK ddPTM_A549_PD325901_60min_R1 2 RKPEEESPRK 10 3 P49321-4;P49321;P49321-3;H0YF33;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 RKPEEES(1)PRK;RKPEEES(1)PRK 82.54299999999999 0.00030625 14647100.0 2744.3999999999996 2963.2 2725.2599999999998 2611.58 3244.8 2342.48 2481.82 2699.58 2876.6000000000004 3068.8 3820.3 True False 3023.0094676795 3212.9192633513044 2910.2125319196784 2772.8913652714846 3016.8964419523036 2323.403619526769 2576.267018204014 2645.734759120459 2755.706505645962 2875.035444275317 3350.427318877004 0.9022757934927395 0.9589580544693656 0.8686093608188233 0.8276231958975616 0.9004512424294304 0.6934648623583715 0.7689368468579486 0.789670841153258 0.8224940413181742 0.8581100769077334 1.0 11.710129395608302 -10.614996170020218 0.9394024307571255 0.9980597785730372 0.8360673377100126 0.07805146149351294 0.07975005326991405 0.4496332012781399 0.7199125012851201 0.04752729744230074 0.013549367194203401 2.426631495097776e-11 10.614996170020218 -0.16199244086302456 RKPNAGGS(ph)PAPVR ddPTM_A549_MK2206_60min_R1 2 RKPNAGGSPAPVR 13 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RKPNAGGS(1)PAPVR;RKPNAGGS(1)PAPVR 53.828 0.0043446000000000005 324300000.0 1708.94 1731.62 1557.9499999999998 1337.68 2390.91 1763.3600000000001 1306.8 1745.16 2156.6 2842.7 2868.8 True False 1997.3672924284213 1819.7520616529748 1778.8907367185775 1665.4116600507375 2039.2103062193257 1949.9575847763663 1544.2286445068135 1992.5417743283526 1668.1335433825327 2200.5320956591063 2156.3977851478967 0.9262517825724031 0.8438851468808047 0.8249362659202379 0.7723118951063638 0.9456559083228081 0.9042661786274411 0.7161149279333462 0.9240140145069264 0.7735741312997703 1.0204666832878344 1.0 11.074407617541757 -10.963870588142399 1.2015958798975344 1.0008917577397143 0.840714816257277 0.431765350063122 0.07084196135399731 0.3743433112169637 0.9521329221776412 0.04982878374124231 0.011277007096347207 1.0867494069337251e-11 10.963870588142399 -0.16017694148243733 RKPNAGGS(ph)PAPVR ddPTM_A549_PD325901_60min_R1 5 RKPNAGGSPAPVR 13 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RKPNAGGS(1)PAPVR;RKPNAGGS(1)PAPVR;RKPNAGGS(1)PAPVR;RKPNAGGS(1)PAPVR;RKPNAGGS(1)PAPVR 95.06700000000001 3.5051e-05 715217000.0 6623.280000000001 6678.410000000001 6315.85 6198.88 7227.400000000001 7177.6 6460.1 7297.6 7344.6 7245.699999999999 7906.2 True False 7295.670509798968 7241.223048581935 6744.481561291367 6581.770738922073 6719.772357176434 7119.148005325695 6705.942640602363 7152.043643143547 7035.932003534499 6788.205265441097 6933.787521531125 1.0521912428299982 1.0443387580158963 0.9726980442287976 0.9492316743892205 0.9691344501558317 1.0267329339439635 0.9671399101542631 1.0314771863046976 1.014731412187955 0.9790039346262113 1.0 12.759427912040717 -8.2824373639501 24.906267847299624 1.00898992210936 0.9964052598620846 0.013605934181923796 0.03335160007689989 2660.960101766377 3156228.5686017834 0.0055202443895276294 0.006675727114873003 5.218703654788415e-09 8.2824373639501 -0.01258466224727528 RKPNAGGS(ph)PAPVRR ddPTM_A549_PD325901_60min_R1 2 RKPNAGGSPAPVRR 14 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RKPNAGGS(1)PAPVRR;RKPNAGGS(1)PAPVRR 58.83 0.0027561 74717000.0 4343.7 3619.2 4218.5 3657.5 4571.4 4682.6 4204.8 4648.4 4331.4 4724.6 5171.4 True False 4784.669226337066 3924.2026855835043 4504.792777901256 3883.415468214818 4250.320634473854 4644.466458111082 4364.81596495485 4555.684015400743 4149.366320849242 4426.28794969472 4535.350584205566 1.0549722976212152 0.8652479257611542 0.9932623055843296 0.8562547472600855 0.9371537118377721 1.024058972262368 0.9623988011324625 1.0044833207086545 0.9148942829909289 0.9759527664982155 1.0 12.146998360563748 -7.04664551021874 24.899132787268552 0.9673803042411016 0.9350705503955833 0.07285289943118933 0.058275266697762194 903.4260474151687 482242.9634267509 0.008428423673557126 0.01459870025094495 8.981616134083277e-08 7.04664551021874 -0.03230975384551826 RKPS(ph)IVTK ddPTM_A549_MK2206_60min_R1 2 RKPSIVTK 8 2 P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100-4 ATRX Transcriptional regulator ATRX 1 RKPS(1)IVTK;RKPS(1)IVTK 89.54799999999999 0.00087251 47414000.0 10239.4 10001.0 9334.0 7882.900000000001 11544.2 9105.1 7683.299999999999 7331.200000000001 10809.7 11903.2 11789.7 True False 11967.5603907051 10510.008182275222 10657.701554306119 9814.210853876826 9846.063472509271 10068.595638523773 9079.256155753897 8370.420050858385 8361.320209543797 9214.258852868565 8861.992110833158 1.3504368138711842 1.1859645157466887 1.202630449340824 1.1074497394191594 1.1110440349493378 1.1361548862377826 1.0245163888890343 0.9445302981737187 0.9435034589257505 1.0397502883809595 1.0 13.113415327163338 -6.057991898989186 0.43612906782868704 0.9669148711477714 1.408265107584365 0.8200551237149549 0.04951111923664277 0.764740177470447 0.14947425978084236 0.012054437068145768 0.15416897117160178 8.750000966854117e-07 6.057991898989186 0.44135023643659366 RKPS(ph)IVTK ddPTM_A549_PD325901_60min_R1 2 RKPSIVTK 8 2 P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100-4 ATRX Transcriptional regulator ATRX 1 RKPS(0.999)IVT(0.001)K;RKPS(1)IVTK 101.93 0.00074113 55284000.0 8760.2 7691.7 8555.7 7528.6 10315.599999999999 9023.1 9998.0 9523.2 12218.2 12986.5 13127.2 True False 9649.529055081615 8339.9065530235 9136.341251603588 7993.624523308844 9591.067842888064 8949.618865199267 10378.479361115522 9333.252305194126 11704.711543935027 12166.53017371005 11512.637620177002 0.8381684001040639 0.7244131908058162 0.7935923593730835 0.6943347638510962 0.8330903967722216 0.777373453457286 0.9014858022566645 0.8106962638028931 1.0166837461661606 1.0567978056033867 1.0 13.490930781708423 -8.418587924515062 1.0559475104376654 1.011505266701557 0.7720086850851092 0.7575200100049021 0.0565909191381746 0.14251165377784436 0.3097064970588982 0.010353266310824285 0.012727387603985035 3.814275650487144e-09 8.418587924515062 -0.2394965816164477 RKPS(ph)PEPEGEVGPPK ddPTM_A549_MK2206_60min_R1 8 RKPSPEPEGEVGPPK 15 2 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK 208.28 8.819e-46 1481211000.0 50413.8 48275.600000000006 49219.2 44405.3 64559.2 51480.600000000006 51246.5 49360.6 69194.1 74326.6 73715.9 True False 58922.41694092713 50732.6218382407 56199.222663563676 55284.60049342969 55062.62720105509 56928.242921943405 60557.325704559495 56357.6162104976 53521.74683027229 57536.169437934375 55410.207574659704 1.0633856020397519 0.9155825985651395 1.0142395259545067 0.9977331418392401 0.9937271418242517 1.0273963122270982 1.0928911540886137 1.0170980885527519 0.9659185405172341 1.038367693541125 1.0 15.757864151145572 -4.916935500022146 19.68949988311011 0.9952210648707581 4.0083669623047795 0.07806413450547 0.04317926089495228 449.5457760883188 109822.16988130384 0.0057100580218673895 1837.4735802029568 1.2107779409270447e-05 4.916935500022146 3.0131458974340215 RKPS(ph)PEPEGEVGPPK ddPTM_A549_PD325901_60min_R1 8 RKPSPEPEGEVGPPK 15 2 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK 188.56 5.1805999999999995e-34 2570436300.0 52056.2 51584.1 53933.600000000006 51279.3 65648.7 55860.5 58200.4 57927.3 63723.4 63763.700000000004 67713.4 True False 57340.907102250996 55931.27314141471 57593.85842508356 54446.7058972599 61037.76178772008 55405.59060848974 60415.24807048091 56771.894558412256 61045.32710209273 59737.64910001886 59385.08107060853 0.9655776512971831 0.9418404779966999 0.9698371608957608 0.9168414846907941 1.0278298974644242 0.9329883804084195 1.0173472357248703 0.9559959089878279 1.0279572916556294 1.0059369798450073 1.0 15.85781291716097 -7.842036084131759 0.7776165025632354 1.0121385149454534 0.954496332875202 0.2636893271647692 0.03228221329755976 0.4681278128209639 0.5715026844326104 0.00614422017000879 0.010726238535357762 1.4386790380754987e-08 7.842036084131759 -0.0576421820702514 RKPS(ph)SEEGKR ddPTM_A549_MK2206_60min_R1 2 RKPSSEEGKR 10 3 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 RKPS(0.878)S(0.122)EEGKR;RKPS(0.971)S(0.029)EEGKR 64.65 0.0017519999999999999 62348000.0 6413.9 5962.799999999999 4350.8 1920.6799999999998 1539.7 1284.6999999999998 1123.0900000000001 1686.77 2133.2799999999997 9194.9 8866.3 True False 7496.409515200446 6266.281050821985 4967.808862489291 2391.2466862226006 1313.212169628257 1420.646101285157 1327.140915487571 1925.8748130164765 1650.0954861481441 7117.765703864608 6664.553012568602 1.1248180487218056 0.9402402590247958 0.7454076594665177 0.35880076003791656 0.19704429796742343 0.21316449859517622 0.19913427246879598 0.288972840246674 0.24759282175957614 1.0680034640644764 1.0 12.702292402560651 -5.84508062925082 2.403216712622218 0.5031064347823999 1.0744638109938853 0.3607891247747478 0.29904195356454094 0.32032604482051585 3.60277477548925 0.05056494040898346 0.2313151899329506 1.4286287008113617e-06 5.84508062925082 0.5713573762114854 RKPS(ph)SEEGKR ddPTM_A549_PD325901_60min_R1 6 RKPSSEEGKR 10 3 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 RKPS(0.5)S(0.5)EEGKR;RKPS(0.974)S(0.026)EEGKR;RKPS(0.5)S(0.5)EEGKR;RKPS(0.549)S(0.451)EEGKR;RKPS(0.948)S(0.052)EEGKR;RKPS(0.962)S(0.038)EEGKR 77.185 0.00041832 146691100.0 13819.59 12683.900000000001 10620.89 11320.41 11300.08 9006.36 7435.860000000001 9406.92 11052.84 17244.81 19027.6 True False 15222.54460335554 13752.81676715093 11341.687463999917 12019.646015183513 10506.401363959685 8933.015190209144 7718.8357213587215 9219.29160101402 10588.32757208646 16155.96975358232 16687.325825894324 0.9122219319127916 0.8241474344445405 0.6796587771061923 0.7202859308069718 0.6296036569056813 0.5353173590191104 0.4625567812298077 0.5524726787984275 0.6345131438409485 0.9681581052676829 1.0 14.026465158286427 -10.58674936553508 0.9308400089437968 0.9949182395434734 0.6563841969758913 0.5048030536785253 0.12249922733916112 0.38811692932204117 0.6134698331559799 0.0845197792261803 0.024700843028315964 2.5897070225053935e-11 10.58674936553508 -0.338534042567582 RKPS(ph)TSDDSDSNFEK ddPTM_A549_MK2206_60min_R1 8 RKPSTSDDSDSNFEK 15 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 RKPS(0.601)T(0.154)S(0.241)DDS(0.004)DSNFEK;RKPS(0.768)T(0.16)S(0.065)DDS(0.007)DSNFEK;RKPS(0.942)T(0.027)S(0.027)DDS(0.004)DSNFEK;RKPS(0.814)T(0.152)S(0.029)DDS(0.005)DSNFEK;RKPS(0.827)T(0.145)S(0.026)DDS(0.001)DSNFEK;RKPS(0.953)T(0.032)S(0.015)DDSDSNFEK;RKPS(0.775)T(0.154)S(0.069)DDS(0.002)DSNFEK;RKPS(0.765)T(0.199)S(0.035)DDS(0.001)DSNFEK 147.17 2.1280000000000002e-14 155933000.0 14961.600000000002 16474.2 16231.1 13800.64 21514.2 15972.7 16323.4 15748.1 24808.1 24389.5 24837.9 True False 17486.752303999605 17312.66641300253 18532.91404522156 17181.797419534276 18349.48967968841 17662.920512179844 19289.150486487997 17980.441401533564 19189.10496039515 18879.895010756598 18669.9639388333 0.9366248569782917 0.9273004741585168 0.9926593380651005 0.9202908733956546 0.9828347681765839 0.9460607728031644 1.0331648496849422 0.963067816330082 1.0278062144770426 1.0112443212322784 1.0 14.188431520540634 -7.593319255179232 1.070111665928241 1.011534063769416 0.9464265657890574 0.4610154991263681 0.028157474680120937 0.2816382710546893 0.6484487265181588 0.0046051395136313955 0.008461081898752686 2.5508254703065455e-08 7.593319255179232 -0.06510749798035853 RKPS(ph)TSDDSDSNFEK ddPTM_A549_PD325901_60min_R1 3 RKPSTSDDSDSNFEK 15 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 RKPS(0.971)T(0.023)S(0.005)DDS(0.001)DSNFEK;RKPS(0.344)T(0.344)S(0.086)DDS(0.227)DSNFEK;RKPS(0.952)T(0.024)S(0.024)DDSDSNFEK 158.92 2.9306e-20 164072000.0 10807.0 11525.1 11793.4 11583.4 12601.400000000001 10234.7 11353.2 12275.400000000001 11190.9 10656.7 12556.2 True False 11904.11868430709 12496.360624341969 12593.771043475328 12298.880310189894 11716.32113646998 10151.351996503972 11785.252238709427 12030.557517134996 10720.585390403054 9983.834143316199 11011.867000309776 1.0810263767236032 1.1348085319220105 1.1436544813991172 1.1168751229781393 1.0639722706549568 0.9218556668200227 1.0702319814049601 1.0925084290244844 0.9735483901232618 0.9066431825806961 1.0 13.426771470044866 -6.9765060072757645 4.178909173228947 0.9984242936403673 1.1206606531841556 0.543896018967335 0.05346675994729873 0.1125889529699671 4.540716593076717 0.006945696190019751 0.013176852104980458 1.0555869019586386e-07 6.9765060072757645 0.12223635954378831 RKPS(ph)VPDSASPADDSFVDPGER ddPTM_A549_MK2206_60min_R1 4 RKPSVPDSASPADDSFVDPGER 22 2 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 RKPS(0.945)VPDS(0.053)AS(0.002)PADDSFVDPGER;RKPS(0.997)VPDS(0.002)AS(0.001)PADDSFVDPGER;RKPS(0.977)VPDS(0.022)ASPADDSFVDPGER;RKPS(0.754)VPDS(0.165)AS(0.082)PADDSFVDPGER 197.73 4.734199999999999e-61 346340000.0 13085.4 14155.699999999999 12539.400000000001 10897.2 14659.1 11172.3 9369.900000000001 10985.5 16319.599999999999 14016.2 17169.0 True False 15293.895612685565 14876.164666116716 14317.67547354468 13567.014489193905 12502.765808792354 12354.545370427471 11072.28954404989 12542.72826668278 12623.236657046082 10849.930685326332 12905.463459705894 1.1850713971208362 1.1527028620524824 1.1094274543683043 1.0512613151440504 0.9687963433339016 0.9573112510838121 0.8579536549477953 0.9718928968219029 0.9781312152375623 0.840723831360458 1.0 13.65569433183087 -6.275159049819199 1.5476019668895526 0.9741072328062613 1.171830950013105 0.7235953967165978 0.05520720985731078 0.14502276574532297 0.6479437152744154 0.006323557456749012 0.023947831445881675 5.306900562782045e-07 6.275159049819199 0.19772371720684367 RKPS(ph)VPDSASPADDSFVDPGER ddPTM_A549_PD325901_60min_R1 4 RKPSVPDSASPADDSFVDPGER 22 2 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 RKPS(0.859)VPDS(0.141)ASPADDSFVDPGER;RKPS(0.949)VPDS(0.022)AS(0.029)PADDSFVDPGER;RKPS(0.706)VPDS(0.282)AS(0.012)PADDSFVDPGER;RKPS(0.814)VPDS(0.054)AS(0.132)PADDSFVDPGER 220.95 2.385199999999999e-75 232481000.0 16761.600000000002 16896.5 16889.4 17677.5 22064.9 19909.0 18610.9 20551.6 25595.1 33296.399999999994 33890.4 True False 18463.225292762247 18320.4273532719 18035.61624821274 18769.399026484603 20515.137543772613 19746.867704807904 19319.147983775256 20141.682215581703 24519.426956357856 31194.05962160082 29722.09564894622 0.6211952720573676 0.6163908349417294 0.6068083644314691 0.6314964882750475 0.6902318660864671 0.6643834249792551 0.6499927936427392 0.6776669604148796 0.8249561957528786 1.0495242324108054 1.0 14.85924822072048 -9.228712254076465 0.5306545659991062 0.994056356764344 0.6173877150056046 0.9445918149283961 0.03539129935947846 0.11115129532730085 0.07266038999505844 0.015483909447705411 0.010386541049088602 5.905922530624801e-10 9.228712254076465 -0.3766686417587394 RKPSS(ph)EEGKR ddPTM_A549_PD325901_60min_R1 1 RKPSSEEGKR 10 3 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 RKPS(0.367)S(0.633)EEGKR 66.023 0.00092177 15597000.0 1072.4 992.22 887.7 744.04 704.79 669.68 438.17 619.3 768.24 1187.7 1367.8 True False 1181.2692585408458 1075.8378615963927 947.9446601737453 789.9976609625569 655.287981793505 664.2263481116967 454.844799125824 606.9475756685486 735.9535444265639 1112.7084193058495 1199.5692711985873 0.9847445136374188 0.8968534685132735 0.7902375318655642 0.6585677708909682 0.5462693964632434 0.5537207096410648 0.37917343337025594 0.5059712600524502 0.613514835780357 0.9275899658500354 1.0 10.228300755614901 -5.749246634607798 2.3249936918426166 0.7138653608135497 0.9709645858119248 0.24011498656064578 0.17871466792862492 0.5083007838462414 5.213600914856031 0.03255084143527536 0.1759101224939395 1.781366846948405e-06 5.749246634607798 0.2570992249983751 RKPST(ph)SDDSDSNFEK ddPTM_A549_PD325901_60min_R1 1 RKPSTSDDSDSNFEK 15 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 RKPS(0.051)T(0.474)S(0.474)DDS(0.002)DSNFEK 179.1 1.9902999999999998e-28 78315000.0 9259.6 9076.7 8502.7 8641.3 10607.0 10222.0 9465.6 10082.0 9636.6 10227.0 11295.0 True False 10199.627775442765 9841.625363681425 9079.744352888703 9175.05347518379 9862.000912163494 10138.755421093303 9825.818587775073 9880.906600824008 9231.607214179203 9581.265474649266 9905.786604904255 1.0296635877854499 0.9935228524718003 0.9166101305264757 0.9262316907413807 0.9955797863928258 1.02351845698692 0.9919271411429769 0.9974883363560518 0.9319408525930416 0.9672392367008672 1.0 13.27405582675672 -5.520006087776538 24.982973001582682 0.9705464579790086 1.0206284251426485 0.20471032374528197 0.032944996073676416 125.28088339999888 1089520.2532751516 0.00521368630176503 0.02097501880666581 3.0199093881524963e-06 5.520006087776538 0.050081967163639884 RKPVLPALTINPTIAEGPS(ph)PTSEGASEANLVDLQK ddPTM_A549_MK2206_60min_R1 2 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK 35 2 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 RKPVLPALTINPTIAEGPS(0.768)PT(0.115)S(0.115)EGAS(0.001)EANLVDLQK;RKPVLPALTINPTIAEGPS(0.33)PT(0.33)S(0.33)EGAS(0.009)EANLVDLQK 129.03 7.2248e-30 93325000.0 1584.21 1736.72 1767.4299999999998 1895.6100000000001 2385.6 1512.52 1376.57 1270.27 2515.4 2962.4 2693.2 True False 1851.585917784142 1825.111629869115 2018.0781506457322 2360.034535097166 2034.68140018521 1672.5738624704823 1626.674950389304 1450.3346625387221 1945.6659162683943 2293.191782523847 2024.404111461348 0.9146325614047215 0.9015549906938439 0.9968751491958543 1.1657922060796142 1.0050766982074755 0.8262055253696894 0.8035327241135976 0.7164254677845794 0.9611054953172786 1.1327737231616617 1.0 10.983281594164273 RKPVLPALTINPTIAEGPS(ph)PTSEGASEANLVDLQK ddPTM_A549_PD325901_60min_R1 1 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK 35 2 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 RKPVLPALTINPTIAEGPS(0.809)PT(0.094)S(0.094)EGAS(0.003)EANLVDLQK 141.13 4.352399999999999e-40 133060000.0 1814.6 1681.0 1960.7 1876.4 1838.2 1828.2 1587.6 1645.7 2078.9 2157.6 1750.7 True False 1998.8168561620828 1822.6637694700132 2093.7648926469087 1992.3009663864084 1709.091173445736 1813.3117453377783 1648.0169867680538 1612.8752224733246 1991.531062569489 2021.368767781679 1535.3749986016733 1.3018427797655194 1.1871130968851162 1.3636830706203913 1.2975989371983234 1.1131425059039473 1.1810220610529891 1.0733644798625535 1.0504764138677742 1.297097493695843 1.3165309905545026 1.0 10.584375345827487 -13.741753615815375 0.36468721960554806 3.350770407321809e-16 1.2231591597785785 0.0 0.1363768810886085 17.682064035414893 0.5324913790417273 12.910462577057883 0.029778351394160792 1.8123679946257904e-14 13.741753615815375 1.223159159778578 RKPVLPALTINPTIAEGPSPTS(ph)EGASEANLVDLQK ddPTM_A549_PD325901_60min_R1 1 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK 35 2 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 RKPVLPALTINPTIAEGPS(0.298)PT(0.298)S(0.396)EGAS(0.009)EANLVDLQK 141.75 4.142599999999999e-40 121130000.0 1716.3 2019.2 1477.4 1788.5 1271.8 2089.2 1778.3 1551.1 2203.8 1618.2 1885.8 True False 1890.5375125267185 2189.3650703830153 1577.6652483279158 1898.9715830217913 1182.4731554718132 2072.1862478720523 1845.9741796230994 1520.1620936855898 2111.18194992094 1516.0265758362611 1653.858555071133 1.1431071337569167 1.323792209236932 0.9539299739330247 1.1482067660496613 0.7149784072199298 1.2529404292272908 1.116162064744227 0.9191608853274681 1.2765190490127116 0.9166603584011187 1.0 10.691620139108819 -8.767117995799895 24.990556942703897 1.1305784141741604 1.0742281199989911 0.0 0.1803743960319438 563.0407870564991 2477830.1662465543 0.030739391601679263 0.03316519214386361 1.7095507749563238e-09 8.767117995799895 -0.056350294175169235 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK ddPTM_A549_MK2206_60min_R1 2 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK 35 2 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 0 ; 107.0 1.3487e-14 11222600.0 1125.13 1082.05 1239.44 1417.3000000000002 1874.38 1279.63 804.59 1141.55 2384.0 1920.02 1935.78 False True 1315.024437212535 1137.1217231907704 1415.211229319602 1764.5385636250153 1598.6611849761714 1415.0395972503522 950.7735882183481 1303.3682083502538 1844.0278064657136 1486.286148488197 1455.0724011899044 0.9037518931272126 0.7814880704636238 0.972605368751613 1.2126809375135155 1.0986815389178197 0.972487414436 0.6534201235903042 0.895741137887302 1.2673100011777667 1.0214516798427122 1.0 10.50687522490143 -8.74126158157448 24.98555947672455 1.1262297391216727 0.9387977421861926 0.17000991174421998 0.1534268221032088 291.9833608438123 361554.0691885088 0.029785821452580005 0.033753657641275144 1.8144224818256541e-09 8.74126158157448 -0.18743199693548007 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK ddPTM_A549_PD325901_60min_R1 1 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK 35 2 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 0 150.68 1.8189999999999998e-40 3898800.0 987.6 991.77 1118.4 856.45 1331.2 986.19 1220.2 1386.3 961.14 970.52 1013.0 False True 1087.860424967307 1075.349938517118 1194.3013494855427 909.3509713609241 1237.7011043906884 978.1587956102522 1266.6353787190606 1358.649158968688 920.7466282543836 909.241201570021 888.4074219360789 1.2245062322831188 1.2104243075475902 1.3443171679980326 1.0235742621096113 1.393168352526147 1.1010250156156742 1.4257370519921155 1.5293086543647123 1.0364013238968997 1.0234507041696475 1.0 9.795077635277412 -8.957005579206506 24.89544628840541 1.016059281713049 1.2756295580246482 0.41957100346750453 0.13705180535357495 86.64849400862859 50173.037935277294 0.022864326294671767 0.0243239180884861 1.104064436339286e-09 8.957005579206506 0.25957027631159924 RKPVLSLFDYEQLMAQEHS(ph)PPKPSSAGEMSPQR ddPTM_A549_MK2206_60min_R1 1 RKPVLSLFDYEQLMAQEHSPPKPSSAGEMSPQR 33 3 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RKPVLSLFDY(0.005)EQLMAQEHS(0.702)PPKPS(0.134)S(0.134)AGEMS(0.026)PQR 41.208999999999996 0.008522799999999999 1710000.0 326.42 503.04 621.14 471.71 628.9 537.89 703.38 654.42 963.01 632.57 846.69 True False 381.51171579721085 528.6425873424379 709.2269920121817 587.2789711758664 536.3896430987924 594.8091627775149 831.1750413018078 747.1860390771966 744.889772610967 489.671997661055 636.433505544783 0.5994525939840947 0.8306328669637266 1.1143772064688642 0.922765640179738 0.8428054752391553 0.934597499338697 1.3059888174654277 1.1740205890599837 1.1704125664681124 0.7694000919104643 1.0 9.313865979263413 -7.542869902632936 24.492476097718782 1.1070013704886938 0.8787639785826056 0.278131026167452 0.16857873339640014 156.7069573960077 191991.1595824595 0.022235963843492294 0.032983653207705695 2.8650360923215856e-08 7.542869902632936 -0.22823739190608827 RKQDS(ph)GHLDLR ddPTM_A549_PD325901_60min_R1 1 RKQDSGHLDLR 11 2 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 RKQDS(1)GHLDLR 40.278 0.020909 2452400.0 1045.3 875.72 920.62 811.15 960.38 866.81 732.57 702.41 1009.0 1368.7 953.2 True False 1151.4180864908108 949.5199977396068 983.0988093377863 861.2528932446894 892.9262219311369 859.7509867499394 760.4483522276856 688.3998815200144 966.5952388920176 1282.2800484161965 835.9624428326465 1.3773562393416234 1.1358404984345614 1.1760083455502741 1.0302530940580854 1.068141552993062 1.0284564744759177 0.9096680822776171 0.8234818291445983 1.1562663456706546 1.5338967191770114 1.0 9.707294317779184 -4.3014782903104685 0.7987125290008532 1.0395847827382554 2.5626910354330388 0.18193288081004877 0.1740513450639213 6.369345964666898 0.9454585596088195 0.01626310059938956 12.40461036118531 4.994841480013175e-05 4.3014782903104685 1.5231062526947834 RKQGGS(ph)PDEPDSK ddPTM_A549_PD325901_60min_R1 2 RKQGGSPDEPDSK 13 2 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 RKQGGS(0.997)PDEPDS(0.003)K;RKQGGS(1)PDEPDSK 44.294 0.020347 7538500.0 1285.59 1491.04 1600.43 1513.88 1200.06 2020.2 1690.1100000000001 1871.53 1642.62 1901.4299999999998 1989.47 True False 1416.102150398663 1616.695173605335 1709.0448039674066 1607.3889293290642 1115.7719255822497 2003.7481609951753 1754.4280609136795 1834.200865963118 1573.5863937649206 1781.3733852999255 1744.7778022894104 0.8116232041355206 0.9265908653147629 0.9795200292695627 0.9212570948690021 0.6394922746714162 1.1484259820167113 1.005530938444773 1.051251834793159 0.9018835474065173 1.0209743515549639 1.0 10.76882760536853 -7.28319420108653 24.995162622821628 0.9772148394732292 0.8701565183820485 0.3446434079593701 0.10361382023092966 1020.1040200224886 1172044.368322305 0.01576452270686392 0.025214969150195273 5.2096170341894195e-08 7.28319420108653 -0.10705832109118063 RKQS(ph)DSDLIPER ddPTM_A549_MK2206_60min_R1 1 RKQSDSDLIPER 12 2 Q9P2M4;C9JP26 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 RKQS(0.934)DS(0.066)DLIPER 65.467 0.0020039000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RKREDS(ph)APPSSVAR ddPTM_A549_PD325901_60min_R1 1 RKREDSAPPSSVAR 14 3 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 RKREDS(1)APPSSVAR 54.805 0.0050758999999999995 1462400.0 485.25 361.75 385.72 298.86 478.71 624.47 553.46 533.71 537.38 717.56 593.21 True False 534.5122227778305 392.2359420617355 411.8972787227859 317.31990343969386 445.0870610598458 619.3845233623687 574.5222231649329 523.0647353626047 514.7957873892883 672.2531391404444 520.2489306680172 1.0274162833770724 0.7539389683282794 0.7917311395410191 0.6099385981096479 0.8555271040890732 1.19055414985103 1.1043217761682411 1.0054124180341357 0.9895182037727076 1.2921759171657472 1.0 9.023058284388801 -7.014647467278815 24.63122014145099 1.0173601707583322 0.7850131727745737 0.48471978209855027 0.13642266577760018 340.60798521824904 572768.4328960658 0.015602642912986135 0.02768317155434502 9.668353761941981e-08 7.014647467278815 -0.23234699798375846 RKREEGS(ph)DIEDEDMEELLNDTR ddPTM_A549_MK2206_60min_R1 3 RKREEGSDIEDEDMEELLNDTR 22 3 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 RKREEGS(1)DIEDEDMEELLNDTR;RKREEGS(1)DIEDEDMEELLNDTR;RKREEGS(1)DIEDEDMEELLNDTR 219.93 2.1254999999999997e-74 41924000.0 2112.09 3070.7000000000003 2336.1000000000004 2652.97 3760.85 3043.7799999999997 2937.51 2773.9800000000005 4881.4 3320.59 4377.98 True False 2468.5591563572434 3226.9855139798524 2667.3941076724377 3302.947769096351 3207.63394696787 3365.870779302358 3471.2175432546733 3167.200159957459 3775.7706939940126 2570.466412750088 3290.80673989884 0.7501379909149959 0.9806062066346231 0.8105593304316722 1.0036893777596565 0.974725713326597 1.022810224159753 1.0548226673929137 0.9624388213252594 1.1473693207854803 0.7811052474108839 1.0 11.684225588068616 -5.981055228088834 0.5526546207021558 1.0640046046506502 0.7490140981158875 0.1254594236898139 0.10924421398407376 1.1312092571637202 0.3648222046866775 0.014353518725791329 0.1960270831104862 1.0445873733409013e-06 5.981055228088834 -0.3149905065347627 RKREEGS(ph)DIEDEDMEELLNDTR ddPTM_A549_PD325901_60min_R1 2 RKREEGSDIEDEDMEELLNDTR 22 3 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 RKREEGS(1)DIEDEDMEELLNDTR;RKREEGS(1)DIEDEDMEELLNDTR 135.35 1.8984e-22 35504000.0 6853.6 8439.599999999999 6580.0 9498.0 8426.5 8454.9 6092.1 7853.1 8952.5 8598.2 8300.9 True False 7549.372426646348 9150.834710778774 7026.558368754352 10084.669888476918 7834.651709846858 8386.046097613158 6323.9381992250355 7696.463759862229 8576.257558157366 8055.3081846220075 7279.941923740569 1.0370099797124948 1.2569928176126033 0.9651942889599284 1.3852679037987747 1.07619700705267 1.151938598612371 0.8686797594637512 1.057214994361884 1.1780667549269026 1.106507204178772 1.0 12.829711225928685 RKREPEDEGEDDD ddPTM_A549_MK2206_60min_R1 2 RKREPEDEGEDDD 13 3 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ; 96.745 8.9615e-05 7650200.0 1011.6199999999999 1230.7 1451.09 822.74 1512.15 1297.76 1170.42 956.6 1280.74 1849.44 2187.5699999999997 False True 1182.3567242655922 1293.337373255285 1656.8763818768014 1024.3113369342025 1289.7147381329926 1435.0881018166322 1383.0701638381267 1092.2009794646342 990.6544349215177 1431.6502195081357 1644.3359951394261 0.7190481311365674 0.7865408146986532 1.0076264138074238 0.622933110971246 0.7843377156161052 0.8727462672219546 0.841111651101972 0.664220075880553 0.6024647260960303 0.8706555252332986 1.0 10.683289406670463 -11.071490253209012 1.4141743250169054 0.9988866572977927 0.7518687003732619 0.20419408264920924 0.11748846411276254 0.37221526057906923 1.3384713900188925 0.08565216743115442 0.019286935807310113 8.482224187381498e-12 11.071490253209012 -0.24701795692453077 RKREPEDEGEDDD ddPTM_A549_PD325901_60min_R1 2 RKREPEDEGEDDD 13 3 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ; 92.19 9.7192e-05 7177500.0 1355.6399999999999 1358.32 1756.08 1698.45 1717.08 1976.09 2002.7199999999998 2076.03 1984.77 2532.3 2253.3 False True 1493.2635748305784 1472.7903934244546 1875.258148966892 1803.3593990401791 1596.4782244044204 1959.9973782105515 2078.934605530434 2034.6219530359704 1901.3570191235963 2372.4101458349787 1976.1583848455755 0.7556396219462276 0.7452795305875971 0.9489412201711918 0.9125581293834909 0.8078695698923826 0.9918220084184766 1.052008088761008 1.0295844546867954 0.9621480918252286 1.2005161954770989 1.0 10.948482865124195 -5.259860361738304 0.5012047815452162 0.9912406845206727 0.5491960032695418 0.5516719307693989 0.08683630065509639 1.8978381854881095 0.3132213592978381 0.011945936296925218 0.4919036015408885 5.4971759558320606e-06 5.259860361738304 -0.44204468125113094 RKRES(ph)ES(ph)ESDETPPAAPQLIK ddPTM_A549_MK2206_60min_R1 1 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 RKRES(0.758)ES(0.416)ES(0.398)DET(0.428)PPAAPQLIK 55.985 0.0021121 20079000.0 1580.6 1780.0 1621.1 1410.9 2724.6 1915.0 1570.8 1866.8 2611.6 2360.7 2785.3 True False 1847.3666380401678 1870.5943970052879 1850.9963562980117 1756.5705633377086 2323.8149492557945 2117.644028925879 1856.194027235463 2131.4246168352274 2020.0767698682273 1827.4162304226459 2093.6331396306614 0.8823736131565354 0.8934680874106149 0.8841073067006127 0.8390059032250444 1.109943717104965 1.011468527527919 0.8865899149661506 1.018050668232751 0.9648666385862568 0.8728445284091276 1.0 11.031792950424725 -6.726735635799001 24.99999871420311 0.9877282931004909 0.8767456881941165 0.3992124234340021 0.06201907627910679 111.58310775512282 80382.11619156707 0.007127521497854772 0.014836586569034513 1.87613620417949e-07 6.726735635799001 -0.11098260490637446 RKRES(ph)ES(ph)ESDETPPAAPQLIK ddPTM_A549_PD325901_60min_R1 1 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 RKRES(0.987)ES(0.378)ES(0.276)DET(0.359)PPAAPQLIK 90.694 8.7475e-07 19978000.0 2531.1 2719.2 3119.6 2784.0 3568.9 2426.1 2865.9 2892.8 2921.6 3177.6 3357.0 True False 2788.055408702661 2948.3565270332297 3331.3148156787365 2955.961357077255 3318.232776036608 2406.3426459708926 2974.963392780655 2835.1008346423027 2798.8153121376795 2976.965793707392 2944.1102817763244 0.9469942162018782 1.0014422847143971 1.131518352522037 1.0040253503322505 1.12707489137756 0.8173412052075133 1.0104796043800761 0.9629737215318405 0.9506489378003253 1.011159742260485 1.0 11.523615998173824 -7.213036223307261 24.999914611915667 0.9678646862227419 1.0427861295547018 0.2513845725977639 0.07075351476329302 457.6355339869674 236365.6625858662 0.009683749827449723 0.01677271271643828 6.122993193941359e-08 7.213036223307261 0.07492144333195994 RKRES(ph)ESES(ph)DETPPAAPQLIK ddPTM_A549_PD325901_60min_R1 2 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 RKRES(0.78)ES(0.483)ES(0.632)DET(0.104)PPAAPQLIK;RKRES(0.999)ES(0.087)ES(0.756)DET(0.159)PPAAPQLIK 160.92 4e-28 32860000.0 5974.700000000001 5881.6 6811.0 6486.8 6790.4 6899.0 5271.0 6434.5 7355.3 7098.0 7329.1 True False 6581.24714565833 6377.263073476993 7273.235417870202 6887.474903408307 6313.465729608272 6842.816831356164 5471.590789401872 6306.158849732403 7046.182319744752 6649.831068647743 6427.667162992811 1.0238935804812286 0.9921582608063436 1.1315513441246206 1.0715357109750223 0.982232833392175 1.064587922466423 0.851256085707808 0.9810960477294172 1.0962270044586364 1.034563691619572 1.0 12.650079510076484 -4.124548647057331 14.173721717547549 1.0309043710829824 1.0293845422411905 0.0 0.07187395795214518 0.0 0.0 0.009773363225646724 0.0 7.506739634252547e-05 4.124548647057331 -0.0015198288417919148 RKRES(ph)ESESDETPPAAPQLIK ddPTM_A549_MK2206_60min_R1 1 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 RKRES(0.36)ES(0.36)ES(0.277)DET(0.004)PPAAPQLIK 72.227 0.0001381 8574700.0 1260.5 1087.2 1093.6 1131.0 1683.7 1030.0 1220.1 977.83 1867.6 1512.3 1337.6 True False 1473.2415837337912 1142.533836193342 1248.6889243399578 1408.0950507725186 1436.0299603839026 1138.9939163413344 1441.776376769791 1116.4403969787834 1444.5915819443649 1170.6703796620357 1005.4370041180379 1.4652748781870308 1.136355466840575 1.241936510418471 1.4004806318101346 1.428264480521659 1.132834689469632 1.4339798225692986 1.11040313058511 1.4367798042320417 1.1643398590535659 1.0 9.973606976754265 -10.951547363933146 1.1459297381241702 0.995517503370356 1.3136624080159809 0.26614020973106567 0.13713163718757443 0.3609641376818379 0.822580484447943 0.09322985794126815 0.020475270172995882 1.1180278863880016e-11 10.951547363933146 0.31814490464562484 RKRESES(ph)ES(ph)DETPPAAPQLIK ddPTM_A549_PD325901_60min_R1 1 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 RKRES(0.445)ES(0.531)ES(0.576)DET(0.448)PPAAPQLIK 78.236 6.8949e-05 11560000.0 2518.1 2633.3 2897.4 3422.0 3606.8 2997.6 2848.4 2882.6 3459.8 2891.1 3973.3 True False 2773.7356582727566 2855.217432567155 3094.03498748159 3633.3691680741244 3353.4708107845067 2973.1885394511132 2956.7974207042876 2825.1042816440468 3314.396637778596 2708.5554526017872 3484.6092888239136 0.795996172991009 0.8193795045328642 0.8879144635827606 1.042690547754471 0.9623663753465838 0.8532344067918703 0.8485305455011953 0.8107377463249386 0.9511530168988427 0.7772910039839642 1.0 11.766781187907558 -14.999999996221836 0.06359381834635638 1.4381729254131936 0.7229915286976399 0.0 0.0985283397557658 242.20440701857186 1.160426550043577 15.88901462390966 2.552296148365891 1.0000000086995432e-15 14.999999996221836 -0.7151813967155537 RKRESESES(ph)DET(ph)PPAAPQLIK ddPTM_A549_MK2206_60min_R1 1 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 RKRES(0.45)ES(0.525)ES(0.531)DET(0.493)PPAAPQLIK 66.3 0.006568000000000001 19299000.0 1297.7 1098.2 1426.0 1376.9 2204.9 1485.9 1457.5 1438.9 2315.5 1776.2 2031.6 True False 1516.7200342811113 1154.093689208543 1628.2282426012994 1714.2405618113903 1880.5621308133686 1643.1369517394078 1722.3088838144167 1642.8684814464373 1791.0429470936906 1374.955186375526 1527.0976506924399 0.9932043531030101 0.755743215691044 1.0662240504809914 1.1225480970611756 1.2314616095183275 1.0759868244145039 1.1278315326026866 1.0758110201410518 1.1728411384049793 0.9003714895063016 1.0 10.576576603290182 -5.881938671227026 6.975419330350761 1.0984199269243857 0.8761921550631601 0.41342419987670875 0.09676008051663312 0.12190797741552972 6.904934426657541 0.011674504302088962 0.03687728972412003 1.3123852140427528e-06 5.881938671227026 -0.22222777186122566 RKRET(ph)DDEGEDD ddPTM_A549_MK2206_60min_R1 7 RKRETDDEGEDD 12 3 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD 130.72 3.132e-08 2558663000.0 14521.829999999996 16715.05 15864.12 14036.6 3929.74 2522.985 2081.6800000000003 2154.137 3975.52 22050.53 22882.280000000002 True False 16972.759879343812 17565.774649249 18113.890762984647 17475.567630126912 3351.6804516951 2789.965598078099 2459.8943102976295 2459.4925165178847 3075.0710676009094 17069.29995824181 17199.978357199532 0.9867896067578125 1.0212672530425804 1.0531345090560869 1.0160226523082818 0.19486538773998865 0.1622075063199298 0.14301729102280944 0.1429939308899418 0.1787834265683103 0.9924024091051822 1.0 14.070119129129116 -6.7405988315481995 23.868870790774796 0.47299181492700804 1.0218607915400202 0.4761909841647597 0.3057106741767219 137.60179157975276 157594.88159620474 0.05517218211061258 0.11473063967678339 1.8171934738636373e-07 6.7405988315481995 0.5488689766130121 RKRET(ph)DDEGEDD ddPTM_A549_PD325901_60min_R1 9 RKRETDDEGEDD 12 3 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD 191.49 4.1059e-20 8940125200.0 15506.279999999999 16001.930000000002 16151.930000000002 16895.13 18365.920000000002 18543.37 18396.01 19115.51 19307.49 19663.859999999997 19265.870000000003 True False 17080.466130479985 17350.468799878217 17248.097099245373 17938.703808475806 17075.961138184386 18392.35894275473 19096.08022723294 18734.23615722251 18496.06333890509 18422.280523744656 16896.29012641229 1.0109003812487685 1.0268803784776372 1.0208215513702112 1.0616948261579633 1.0106337551277742 1.088544219183582 1.1301936747275627 1.1087780818782902 1.094681921328519 1.0903151156801538 1.0 14.044418892106005 -7.2497639560896205 24.037991240900137 1.0609540477676573 1.0278994144036528 0.27993587914449125 0.0373410030826135 911.9822584775119 1877637.122901072 0.007329402793677329 0.012621455722744219 5.626470470669181e-08 7.2497639560896205 -0.03305463336400449 RKRS(ph)PS(ph)PSPTPEAK ddPTM_A549_MK2206_60min_R1 1 RKRSPSPSPTPEAK 14 3 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 RKRS(0.966)PS(0.854)PS(0.173)PT(0.007)PEAK 71.594 0.00060851 12587000.0 2217.2 2169.1 1846.5 1822.4 2630.5 2148.6 2002.1 1943.2 3524.4 3457.3 3476.6 True False 2591.409154664467 2279.497925024815 2108.361465612411 2268.8880818106445 2243.55693460228 2375.963425874751 2365.8556543978343 2218.6545508004156 2726.1290273103023 2676.2935288008694 2613.2642707212713 0.9916368519243667 0.8722799108241985 0.8067922901002641 0.8682199145455819 0.8585266173570151 0.9091937055485688 0.905325833634441 0.8489973921344197 1.0431891859746278 1.0241189759435243 1.0 11.351637311647039 -8.763501558730091 24.999999347660946 1.0203948999155918 0.8801085224699772 0.6605887776783474 0.04460067516977977 22.946173003726024 278177.58219387726 0.007781568868361933 0.008484344261941511 1.7238459039455747e-09 8.763501558730091 -0.14028637744561467 RKRS(ph)PSPS(ph)PTPEAK ddPTM_A549_MK2206_60min_R1 1 RKRSPSPSPTPEAK 14 3 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 RKRS(0.858)PS(0.446)PS(0.696)PTPEAK 95.76700000000001 1.6365e-05 11162000.0 2087.7 2208.3 1505.1 1541.1 2309.1 1665.1 1590.2 1680.1 2324.3 3083.7 3108.4 True False 2440.05272063549 2320.6930375880765 1718.5458120190847 1918.6695691826067 1969.434448846274 1841.2997767960737 1879.1187561177953 1918.259320090459 1797.849761144403 2387.0900282773387 2336.498492524306 1.0443202631812127 0.9932354097437684 0.7355219006207885 0.8211730396237982 0.8428999441461383 0.788059475615912 0.8042456531130192 0.8209974567618958 0.7694632660353408 1.0216527149128927 1.0 11.190132391058718 -4.291338659638949 18.92847225581196 0.870703398480605 0.8584627920125736 0.0 0.10876473260250076 0.0 0.0 0.015172501853953985 0.0 5.112829853432881e-05 4.291338659638949 -0.012240606468031379 RKRS(ph)PSPS(ph)PTPEAK ddPTM_A549_PD325901_60min_R1 1 RKRSPSPSPTPEAK 14 3 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 RKRS(0.804)PS(0.238)PS(0.954)PT(0.003)PEAK 96.666 1.5227e-05 32023000.0 2295.1 2470.6 1952.8 2352.9 2472.9 2412.5 2617.8 2516.1 2191.1 2748.0 2557.4 True False 2528.096862436681 2678.8061325714543 2085.3287511403505 2498.233289176391 2299.2120350418686 2392.8533998618254 2717.421811515125 2465.9144116577354 2099.0156867554997 2574.4908110233855 2242.8560126943034 1.1271775130137411 1.194372762856699 0.9297648798396477 1.1138625373348452 1.0251269016060758 1.0668778496339284 1.2115899532269723 1.099452839460468 0.9358673382844532 1.1478627234437109 1.0 11.131121289642815 -8.753149552991166 24.965672337566346 0.9697151313190288 1.094875700886242 0.0 0.09128203844852553 139.12615519725213 418992.21563860343 0.012581100898338882 0.01414860222467316 1.7654297752711634e-09 8.753149552991166 0.12516056956721322 RKRSPS(ph)PS(ph)PTPEAK ddPTM_A549_PD325901_60min_R1 1 RKRSPSPSPTPEAK 14 3 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 RKRS(0.594)PS(0.702)PS(0.701)PT(0.002)PEAK 75.46300000000001 0.00028662 30050000.0 2131.8 2154.7 2085.2 2152.0 1914.2 2300.2 2125.3 2411.6 2058.8 2183.5 2788.6 True False 2348.218766651787 2336.284130920308 2226.714211326229 2284.924152453393 1779.7531956315036 2281.467933828879 2206.1794545087837 2363.498746136399 1972.275795669856 2045.6334373615593 2445.619878391857 0.9601732417205747 0.9552932373352134 0.9104907230270094 0.9342924354850554 0.727730916548568 0.9328792074298488 0.9020941782495978 0.9664211380595018 0.8064523081022495 0.8364478288043222 1.0 11.255984468504678 -11.136750908851756 1.5135693380580244 0.9998352292812034 0.8873362454586056 0.0 0.08434738265841432 0.4689392038648966 1.9290592236284168 0.05230130292655752 0.011294721143412949 7.298760132153643e-12 11.136750908851756 -0.11249898382259782 RKS(ph)ASDSGCDPASKK ddPTM_A549_MK2206_60min_R1 1 RKSASDSGCDPASKK 15 3 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 RKS(0.792)AS(0.191)DS(0.001)GCDPAS(0.015)KK 41.348 0.027489 4283300.0 746.39 768.07 604.55 432.37 843.71 562.36 406.05 673.77 776.3 680.38 825.27 True False 872.3623845165131 807.1614823077821 690.2842805502211 538.3006694098267 719.601376655879 621.8685619356437 479.8240290036666 769.2789608340861 600.4692894963644 526.6816854555676 620.3326827067087 1.4062815144772296 1.3011751674696228 1.112764649991181 0.867761258460621 1.160024929713568 1.002475896034098 0.7734946785490034 1.2401070945955601 0.9679794507623327 0.8490310121296334 1.0 9.276898326189746 -5.78359831928037 2.4926048736474566 0.9948044566133603 1.3881193089585917 0.5584409688227161 0.1270613019165482 0.1399016532109388 1.6865190531269951 0.015173997699074137 0.07371147067537041 1.6458933128140428e-06 5.78359831928037 0.39331485234523145 RKS(ph)CLVK ddPTM_A549_MK2206_60min_R1 2 RKSCLVK 7 2 Q99661-2;Q99661;Q5JR89;Q5JR91 Q99661-2 KIF2C Kinesin-like protein KIF2C;Kinesin-like protein 1 RKS(1)CLVK;RKS(1)CLVK 59.8 0.006046 9886400.0 2577.1 3216.8 2866.3 2523.0 4067.7 2906.9 2288.1 2580.8 3693.1 3838.4 3708.0 True False 3012.051475954269 3380.521379936299 3272.7844402300857 3141.1351132617724 3469.3467184496053 3214.5062285559497 2703.818152353869 2946.636303368524 2856.6187466688434 2971.302774115425 2787.2012644061647 1.0806723986600983 1.2128730792092783 1.174218913440174 1.1269853933318361 1.24474208689367 1.153309690838141 0.9700835698099252 1.057202556915576 1.0249058017980874 1.066052463473062 1.0 11.444601468186276 -7.701786730575474 6.852182314281241 1.0134157867408196 1.17080050947373 0.6900897564360149 0.047067852693324315 0.07398512904858129 6.761981966141695 0.006273401875436088 0.009295374131375954 1.9870704704832932e-08 7.701786730575474 0.15738472273291038 RKS(ph)CLVK ddPTM_A549_PD325901_60min_R1 2 RKSCLVK 7 2 Q99661-2;Q99661;Q5JR89;Q5JR91 Q99661-2 KIF2C Kinesin-like protein KIF2C;Kinesin-like protein 1 RKS(1)CLVK;RKS(1)CLVK 54.982 0.0084515 18123600.0 4133.4 4069.1 4569.8 3302.0 3920.5 3954.3 5053.2 4254.2 3428.4 3829.5 4453.1 True False 4553.019725151746 4412.017337507693 4879.934108439767 3505.957040613898 3645.137604990758 3922.0974918439883 5245.502291217142 4169.346643644664 3284.316270582152 3587.704716453442 3905.396930526706 1.1658276498255191 1.1297231538799466 1.2495360126637958 0.8977210519139377 0.933359059228623 1.0042762775754601 1.3431419096521133 1.067585886355055 0.8409686208615954 0.9186530281749318 1.0 11.93125347082715 -5.497314891279289 0.2863163120357726 0.9329984002312042 1.3479714148914865 0.15340596351857605 0.13819933212492802 8.80994821610658 0.5784008297700572 0.07006024546219282 1.25550545779753 3.1818896116360846e-06 5.497314891279289 0.41497301466028236 RKS(ph)DDVHLR ddPTM_A549_MK2206_60min_R1 2 RKSDDVHLR 9 2 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 RKS(1)DDVHLR;RKS(1)DDVHLR 70.488 0.00072581 7661200.0 1358.47 1582.38 1349.7199999999998 1194.61 1540.21 1171.6499999999999 1537.6399999999999 1471.25 1720.04 1985.4099999999999 1759.17 True False 1587.7465245972573 1662.9163831085557 1541.1305915875346 1487.2895036280809 1313.6471493038498 1295.6332253216751 1817.0092844654548 1679.8041930141578 1330.4536863394649 1536.9045020728688 1322.3195383779373 1.2007283251254943 1.2575752946586736 1.1654751721191448 1.124758018362573 0.993441532986251 0.979818559522309 1.374107567596213 1.2703466478871965 1.0061514238619702 1.1622792051898125 1.0 10.36885513074284 -8.79151246775676 22.64362307881935 1.0029046574619904 1.1664642634148008 0.11418530524971837 0.11882593977780966 66.02460585482257 49712.89755071647 0.02002940760479538 0.021325459758675232 1.6161718282652526e-09 8.79151246775676 0.16355960595281038 RKS(ph)DDVHLR ddPTM_A549_PD325901_60min_R1 3 RKSDDVHLR 9 2 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 RKS(1)DDVHLR;RKS(1)DDVHLR;RKS(1)DDVHLR 65.395 0.0011997 7668300.0 2532.1 2594.79 2613.12 2314.92 3167.24 2790.6200000000003 2200.13 2525.3199999999997 2734.0899999999997 3249.5 3082.3599999999997 True False 2789.156927966501 2813.4620597162966 2790.4620371670803 2457.907350835227 2944.783988784828 2767.8941159471133 2283.8571511073324 2474.9505115247853 2619.185705354088 3044.3260154368622 2703.249260689924 1.031779410254847 1.04077049076793 1.0322622030255906 0.9092418470533196 1.0893497805057235 1.023913760450152 0.8448562936162408 0.91554654153244 0.9689027732076836 1.1261728837613327 1.0 11.4004788304161 RKS(ph)DGIYIINLK ddPTM_A549_MK2206_60min_R1 3 RKSDGIYIINLK 12 2 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 RPSA 40S ribosomal protein SA 1 RKS(0.9)DGIY(0.1)IINLK;RKS(0.998)DGIY(0.002)IINLK;RKS(0.996)DGIY(0.004)IINLK 95.57 5.3154e-05 11260900.0 3161.75 3629.35 3528.95 3177.27 4860.58 3944.8500000000004 3947.5599999999995 3536.5 5549.57 3797.68 4588.469999999999 True False 3695.3761026341253 3814.0684127927743 4029.4081744234586 3955.701292633069 4145.595120771392 4362.291408620499 4664.780553955704 4037.8097050770252 4292.601255842253 2939.7814503966915 3449.0262636703733 1.0714259098455203 1.1058391908949778 1.1682741348961072 1.1469037897158556 1.2019610185164977 1.264789269530888 1.352492036112115 1.170710048690694 1.2445835223284634 0.852351134974613 1.0 11.751973399347412 -10.815473127380036 1.0333998239299973 0.9987103268508788 1.1966376724106509 0.5450021472300475 0.08756282388641819 0.39193765812591186 0.7349846512493851 0.05691682172831323 0.013747527565589269 1.5294203786620883e-11 10.815473127380036 0.1979273455597721 RKS(ph)DGIYIINLK ddPTM_A549_PD325901_60min_R1 4 RKSDGIYIINLK 12 2 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 RPSA 40S ribosomal protein SA 1 RKS(1)DGIYIINLK;RKS(1)DGIYIINLK;RKS(1)DGIYIINLK;RKS(1)DGIYIINLK 128.06 1.8392999999999998e-08 23413300.0 7535.549999999999 7693.950000000001 8175.5 7764.89 9215.7 8960.7 8010.86 8462.51 8795.5 8890.0 8675.33 True False 8300.553488621286 8342.346168419877 8730.338593275263 8244.509619955319 8568.421024439056 8887.727030110615 8315.717661010794 8293.718599339329 8425.855722175156 8328.68388282311 7608.319407447908 1.0909838354703851 1.0964768592987064 1.1474726711301042 1.0836177056242715 1.1261910240060753 1.1681590314689303 1.0929769395420497 1.090085491313689 1.1074529434091513 1.0946811558239822 1.0 12.893362098403719 -10.633879656793114 0.5391211540669338 0.9817154351551302 1.1159291892219334 0.15736052399220957 0.03731671916356356 0.506157887004205 0.2110535093166342 0.034274092857173234 0.005790737044101245 2.3233805170083904e-11 10.633879656793114 0.13421375406680325 RKS(ph)DSGVMLPTLR ddPTM_A549_PD325901_60min_R1 1 RKSDSGVMLPTLR 13 2 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 RKS(0.827)DS(0.173)GVMLPTLR 43.813 0.013888999999999999 4291300.0 968.5 1426.8 1162.0 1136.8 1406.6 1487.5 1559.3 1422.2 1324.1 1443.8 1395.3 True False 1066.8214070279826 1547.041443355035 1240.8603076736417 1207.017554139879 1307.8052685065677 1475.386293179053 1618.6400147817 1393.8331053056836 1268.4526816817834 1352.6382215995511 1223.6869455354504 0.8718090937557335 1.2642460957839947 1.014034114036149 0.9863777321018348 1.0687417016893235 1.2056893297439453 1.3227566255300938 1.1390438628041277 1.0365826703550758 1.1053793018995355 1.0 10.25701880683468 -8.8830926276047 4.591056486907265 1.0157227097395392 1.115793557564372 0.030061781180491742 0.12458555054689603 0.3451344783108347 12.032781761175828 0.021448725318346757 0.02263877067152166 1.308902726602514e-09 8.8830926276047 0.10007084782483289 RKS(ph)EAGSGAASSSGEDKENDGFVFK ddPTM_A549_MK2206_60min_R1 2 RKSEAGSGAASSSGEDKENDGFVFK 25 3 G8JLH2;B4DIG0;P30305-2;P30305 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 RKS(0.939)EAGS(0.06)GAASSSGEDKENDGFVFK;RKS(0.5)EAGS(0.5)GAASSSGEDKENDGFVFK 111.68 2.8068e-13 13893400.0 2135.98 2333.01 2153.41 2088.91 3595.4 2634.8 2369.8 2481.4 3926.8999999999996 3412.1 3527.2 True False 2496.4812043028196 2451.750243908599 2458.795918583493 2600.693043774734 3066.521422797579 2913.6127871613094 2800.3619848119415 2833.1460489687884 3037.463419970726 2641.304240193633 2651.2988942323136 0.9416068515449966 0.9247355133146938 0.9273929559328089 0.9809128082210314 1.1566109839477354 1.0989378804101033 1.0562226653901234 1.0685879495261996 1.145651071849531 0.9962302801617641 1.0 11.37248360628913 -6.567606292226425 6.618791894174299 1.0766305668754546 0.9341563941760509 0.6476987346554202 0.047385077338617354 0.10565988183096822 11.471962487814935 0.00815354209422962 0.017180710018455104 2.706410737228911e-07 6.567606292226425 -0.14247417269940366 RKS(ph)EAGSGAASSSGEDKENDGFVFK ddPTM_A549_PD325901_60min_R1 2 RKSEAGSGAASSSGEDKENDGFVFK 25 3 G8JLH2;B4DIG0;P30305-2;P30305 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 RKS(1)EAGSGAASSSGEDKENDGFVFK;RKS(1)EAGSGAASSSGEDKENDGFVFK 218.93 1.0167e-81 38833000.0 5632.6 5553.7 6315.9 5280.299999999999 6646.2 6268.1 6157.8 6820.0 7083.2 7368.4 7879.2 True False 6204.417405499037 6021.729789711849 6744.53495459204 5606.452138568615 6179.393840145283 6217.054671781935 6392.138448677455 6683.969749813501 6785.517736491513 6903.15796650099 6910.108350364021 0.8978755601092987 0.8714378247621294 0.9760389580919873 0.8113406989158527 0.8942542615586854 0.8997043688112971 0.9250417105747293 0.9672742323152419 0.9819698031412278 0.9989941715077935 1.0 12.754492616883049 -8.217083117874722 1.3491740297753065 0.9926927020548145 0.8896431085316183 0.6129544519020194 0.035899919801360605 0.18645632318685187 0.6628584624140874 0.006143220353065921 0.008148222669478613 6.066202198731325e-09 8.217083117874722 -0.1030495935231962 RKS(ph)EDGTPAEDGTPAATGGSQPPSMGR ddPTM_A549_MK2206_60min_R1 8 RKSEDGTPAEDGTPAATGGSQPPSMGR 27 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 RKS(0.951)EDGT(0.049)PAEDGTPAATGGSQPPSMGR;RKS(0.904)EDGT(0.093)PAEDGT(0.003)PAATGGSQPPSMGR;RKS(0.983)EDGT(0.017)PAEDGT(0.001)PAATGGSQPPSMGR;RKS(0.93)EDGT(0.07)PAEDGTPAATGGSQPPSMGR;RKS(0.81)EDGT(0.19)PAEDGTPAATGGSQPPSMGR;RKS(0.912)EDGT(0.088)PAEDGTPAATGGSQPPSMGR;RKS(0.981)EDGT(0.019)PAEDGTPAATGGSQPPSMGR;RKS(0.549)EDGT(0.451)PAEDGTPAATGGSQPPSMGR 142.12 3.5917e-33 82609000.0 7852.5199999999995 7995.629999999999 7717.41 7254.5 11263.27 7727.07 8383.27 9452.34 12274.53 13460.830000000002 14807.57 True False 9177.833400318346 8402.573414903029 8811.854783824465 9031.852825666881 9606.457903363547 8544.74341858606 9906.40164419546 10792.238141577194 9494.368553396635 10420.019154047546 11130.441700858362 0.8245704570386067 0.7549182360170877 0.7916895861504677 0.8114550229368129 0.8630796657982326 0.7676913143462315 0.8900277195137274 0.9696145428572627 0.853009144521591 0.9361730139823625 1.0 13.44222322532848 -14.99999999965336 0.08615741190599972 1.5643865079905812 0.6759472095021078 0.6138920105420913 0.04821117378161065 58.113838596490325 0.36727383841088707 6.131705858486587 0.5356605995594809 1.0000000007981682e-15 14.99999999965336 -0.8884392984884734 RKS(ph)EDGTPAEDGTPAATGGSQPPSMGR ddPTM_A549_PD325901_60min_R1 5 RKSEDGTPAEDGTPAATGGSQPPSMGR 27 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 RKS(0.741)EDGT(0.259)PAEDGTPAATGGSQPPSMGR;RKS(0.969)EDGT(0.031)PAEDGTPAATGGSQPPSMGR;RKS(0.878)EDGT(0.122)PAEDGTPAATGGSQPPSMGR;RKS(0.987)EDGT(0.013)PAEDGTPAATGGSQPPSMGR;RKS(0.738)EDGT(0.248)PAEDGT(0.015)PAATGGSQPPSMGR 167.55 1.3545000000000001e-48 152517000.0 11681.099999999999 11043.18 11637.960000000001 11199.5 13232.599999999999 11794.85 11868.529999999999 12912.029999999999 14337.8 13504.2 14446.9 True False 12866.956672828674 11973.827534643582 12427.781950338665 11891.267679090053 12303.187825991765 11698.796652170062 12320.193403858819 12654.489432358412 13735.232127042576 12651.54250735881 12670.022886444567 1.0155432857658688 0.9450517684111027 0.9808807814889529 0.938535611629582 0.9710470088538457 0.9233445556508345 0.9723891988419354 0.9987739995242807 1.0840731899338285 0.9985414091788636 1.0 13.629131510036874 -8.460852264799907 3.6106370167886825 1.0398093382125526 0.961829325749736 0.41947275414205065 0.0318893798596314 0.14950331626858154 3.8627018731862823 0.00608517624661729 0.007284140680615862 3.4605707703483445e-09 8.460852264799907 -0.0779800124628166 RKS(ph)ELEFETLK ddPTM_A549_MK2206_60min_R1 4 RKSELEFETLK 11 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK 135.45 1.5516e-08 33338900.0 10794.6 12208.0 12618.5 10270.2 16480.5 13172.9 12430.9 12890.599999999999 17756.5 15310.199999999999 16316.300000000001 True False 12616.464577368337 12829.335055416042 14407.993042962473 12786.3994610468 14056.24028158633 14566.847534536671 14689.4336218241 14717.882025806828 13734.681101303866 11851.615186604296 12264.512403028664 1.0286967930541422 1.0460534127918446 1.174770962717155 1.042552613660308 1.1460904290100604 1.187723331825198 1.1977185182018826 1.20003808893147 1.1198717608954556 0.9663339884329682 1.0 13.582202257740454 -10.346088659232604 0.936738428899122 1.0067464351087414 1.1284652428191428 0.42949781476141413 0.06216583940605491 0.44598538329137766 0.7557180305565769 0.031756363696390705 0.012050253802690505 4.507246817659884e-11 10.346088659232604 0.12171880771040144 RKS(ph)ELEFETLK ddPTM_A549_PD325901_60min_R1 7 RKSELEFETLK 11 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(0.997)ELEFET(0.003)LK 123.97 1.8875e-06 54221100.0 18684.79 18841.66 19988.94 21447.1 24821.33 21522.68 21191.75 23290.230000000003 25518.510000000002 23524.96 25120.499999999996 True False 20581.656125784604 20429.51281301152 21345.509671660893 22771.83865710186 23077.965409739892 21347.406429901825 21998.21364282055 22825.688091818025 24446.055767708956 22039.590010805197 22030.83775196967 0.9342203123412545 0.9273143873607356 0.9688923277442092 1.033634713008857 1.047530088032018 0.968978423346305 0.9985191616625562 1.036078988406934 1.1096289684001397 1.000397273083033 1.0 14.42723673603319 -5.728850856018707 0.579151334742328 1.0466772428125233 0.8722241859471954 0.4101845569120377 0.03888223186737671 1.6657003416518201 0.5137570241424799 0.00890901307666133 0.1740961633722384 1.8670207468724166e-06 5.728850856018707 -0.17445305686532786 RKS(ph)ELPQDPHTKK ddPTM_A549_PD325901_60min_R1 2 RKSELPQDPHTKK 13 3 H0YJ75;Q13362-3;Q13362;Q13362-4;Q13362-5 H0YJ75 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform 1 RKS(1)ELPQDPHTKK;RKS(1)ELPQDPHTKK 68.257 0.00068872 10781700.0 2753.3 3234.1 2247.44 2173.03 3534.4 3581.9 2922.2 3138.5 3326.3999999999996 3619.7 3961.4 True False 3032.8129891276667 3506.6489570749354 2399.9647933546044 2307.2531277907988 3286.1559370180657 3552.7301939751587 3033.405920089198 3075.9001553943804 3186.602975867596 3391.1515242581345 3474.1729133835997 0.8729597129274491 1.0093478489703918 0.6908017687056364 0.6641158011745871 0.9458815145206982 1.022611793526146 0.8731303811631167 0.8853618493037729 0.9172263601479953 0.9761032650949407 1.0 11.762453845006576 -6.945506288341507 24.99973248029373 0.9516076476567189 0.8138635218228812 0.32243306614402245 0.09486246540588777 88.179750775957 40453.11497542808 0.014329707860670513 0.027080605855446426 1.1336884228114692e-07 6.945506288341507 -0.13774412583383766 RKS(ph)ELPQDVYTIK ddPTM_A549_MK2206_60min_R1 2 RKSELPQDVYTIK 13 2 E9PFR3;Q14738-2;Q14738;H0Y8C4;Q14738-3 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 1 RKS(1)ELPQDVYTIK;RKS(1)ELPQDVYTIK 104.44 2.3203e-05 82814000.0 6788.9 7084.3 6689.5 5707.5 7660.5 4899.9 6055.9 4971.9 8705.2 9327.2 12881.0 True False 7934.700347330687 7444.8606105081835 7638.171689257635 7105.837756219408 6533.650597802985 5418.404165709617 7156.178641160701 5676.682050805162 6733.486099347868 7220.179041978264 9682.292202485383 0.8195063918122507 0.7689150931219711 0.7888805181170803 0.7339003623951139 0.6748041126176546 0.559619979690217 0.7390996358614084 0.5862952627424314 0.6954433886656948 0.7457096822718168 1.0 13.241132918699257 -10.563931396336397 0.8735152649353596 0.999041432820322 0.7056567758905048 0.13348554767072096 0.1048451523139108 0.2922919987359713 0.4012060689584465 0.0535579941074374 0.015132948968146855 2.7294089019435147e-11 10.563931396336397 -0.2933846569298172 RKS(ph)ELPQDVYTIK ddPTM_A549_PD325901_60min_R1 3 RKSELPQDVYTIK 13 2 E9PFR3;Q14738-2;Q14738;H0Y8C4;Q14738-3 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 1 RKS(1)ELPQDVYTIK;RKS(1)ELPQDVYTIK;RKS(1)ELPQDVYTIK 120.39 2.1837e-06 210366000.0 24079.5 23100.1 24855.3 21815.199999999997 27426.5 25237.5 25010.699999999997 24560.699999999997 29431.0 28084.9 28228.6 True False 26524.03311360901 25046.82649680799 26542.130125060798 23162.67535808611 25500.157256288487 25031.97416746646 25962.495874880195 24070.81757100358 28194.117419059425 26311.614621000983 24756.661155838905 1.0713897543228792 1.01172069767981 1.0721207499663494 0.9356138621553638 1.030032163698061 1.0111207650294403 1.0487074856924674 0.9722966041132098 1.1388497520559144 1.0628094982345928 1.0 14.595529135994987 -8.73887937207652 24.999924818594774 1.0655679703824725 1.018944081229017 0.1649956727197378 0.04814505865081918 386.83252814494705 428669.599116259 0.009989078808939946 0.01132255457565919 1.8244023707627129e-09 8.73887937207652 -0.04662388915345561 RKS(ph)EQEFSFDTPADR ddPTM_A549_PD325901_60min_R1 1 RKSEQEFSFDTPADR 15 2 F8VXG7;Q99590;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 RKS(1)EQEFSFDTPADR 96.37899999999999 5.663400000000001e-06 11371000.0 5496.2 6178.2 8030.5 6765.2 7938.9 7919.1 6177.2 7154.0 8580.9 8254.6 8067.9 True False 6054.17017791141 6698.858596394782 8575.498021319429 7183.071039116032 7381.299051718182 7854.609475169238 6412.276726293542 7011.307857795568 8220.27461388356 7733.4031472611505 7075.599446631882 0.8556406031143141 0.9467549211796555 1.211981837864144 1.0151890441643512 1.043204764118158 1.1100980961985036 0.9062520814891389 0.9909136195001941 1.1617778360526845 1.0929679111417756 1.0 12.788636663284802 -5.532295775605391 24.90410071675699 1.0640211985181616 0.8784191315398864 0.38036066131460833 0.08094947610833178 125.5492768212481 332026.4085535221 0.011990463977296164 0.04656027356592716 2.9356496511990575e-06 5.532295775605391 -0.1856020669782752 RKS(ph)FCISTLANTK ddPTM_A549_PD325901_60min_R1 1 RKSFCISTLANTK 13 2 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RKS(0.899)FCIS(0.045)T(0.056)LANTK 46.318999999999996 0.0078606 2932700.0 1230.8 1367.7 1527.1 1562.9 1635.0 1480.9 1494.7 1356.8 1494.5 1833.8 1433.5 True False 1355.7499099329293 1482.9608789435674 1630.7381891982943 1659.436783396565 1520.1632404437921 1468.8400413908303 1551.581626431223 1329.7375596109912 1431.6913622637458 1718.0135550417333 1257.1885877052027 1.0783981999133754 1.1795850626121862 1.2971309198526426 1.3199585166658268 1.2091767737238275 1.1683529867797826 1.2341677625815772 1.0577073102757122 1.138803976002574 1.3665519810179736 1.0 10.295985365716799 -9.491705665192292 0.4164330775292582 0.9948013458990703 1.2246754991922102 0.0 0.12748939606473272 0.6443604664205141 0.259053458415643 0.05832571177408354 0.028517440688002667 3.223252549181577e-10 9.491705665192292 0.22987415329313987 RKS(ph)FDASDTLALPR ddPTM_A549_MK2206_60min_R1 4 RKSFDASDTLALPR 14 2 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 1 RKS(0.977)FDAS(0.022)DT(0.001)LALPR;RKS(1)FDASDTLALPR;RKS(0.999)FDAS(0.001)DTLALPR;RKS(0.996)FDAS(0.004)DTLALPR 120.29 4.7772e-07 29778800.0 4063.1100000000006 4417.929999999999 3968.29 3870.13 6278.75 4369.7300000000005 4208.900000000001 4015.0299999999997 6887.8 6341.13 6452.84 True False 4748.863634497905 4642.783766495265 4531.053192729528 4818.312023736737 5355.154192409833 4832.131928207979 4973.602649115953 4584.172798013686 5327.724297556436 4908.66432889395 4850.421738676019 0.9790620053987644 0.9571917694238622 0.9341565407807885 0.9933800158688784 1.1040594985193157 0.9962292329505698 1.0253959175256289 0.945108084408551 1.098404341848159 1.0120077373382854 1.0 12.243894478115271 -6.526886269975047 24.94565061249628 1.0379227635244361 0.9579965985274979 0.29648143109538116 0.0443789447410976 94.17742881646787 586225.9812374385 0.007090344601338564 0.014810086918737765 2.9724443329189096e-07 6.526886269975047 -0.07992616499693828 RKS(ph)FDASDTLALPR ddPTM_A549_PD325901_60min_R1 2 RKSFDASDTLALPR 14 2 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 1 RKS(1)FDASDTLALPR;RKS(1)FDASDTLALPR 171.98 2.6695e-23 13710600.0 1569.99 1652.0700000000002 1356.5 1500.3899999999999 1967.35 1750.88 1549.87 1971.8400000000001 1836.54 1608.85 1606.92 True False 1729.3742290344487 1791.29573684017 1448.5602472971555 1593.0656826670765 1829.1701229890482 1736.6214137824134 1608.8511509714056 1932.510104321446 1759.356610539887 1507.266936431942 1409.2790271051579 1.227134013756529 1.2710724437017444 1.0278732738063139 1.1304118290466867 1.2979474524263668 1.2322764905894181 1.1416129240752235 1.3712757141437582 1.2484089926136444 1.0695305240780202 1.0 10.460741567826423 -10.7061376461494 0.9980429657137628 1.001751314545462 1.2153911781201614 0.37364838919792587 0.08927727480041642 0.3976097501746518 0.7131571822286406 0.05871888965332999 0.0158546318348925 1.967262682774894e-11 10.7061376461494 0.21363986357469944 RKS(ph)FTSLYK ddPTM_A549_MK2206_60min_R1 2 RKSFTSLYK 9 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 RKS(1)FTSLYK;RKS(1)FTSLYK 76.52199999999999 0.00065201 17908900.0 8572.5 7723.200000000001 7375.8 7122.9 10806.8 8701.099999999999 8319.6 7325.700000000001 12062.0 11363.7 13643.1 True False 10019.328422497367 8116.277891545641 8421.799349073395 8868.010819759136 9217.134035681398 9621.844626677268 9831.163629353287 8364.140409015336 9329.976259055975 8796.632277567593 10255.141739595398 0.9770053575966143 0.791434979412177 0.82122700621061 0.8647380060598764 0.898781730153351 0.9382458937185674 0.9586570209356425 0.8156045641691279 0.9097852078467787 0.8577777373474559 1.0 13.324059811454804 -12.067986249268765 0.20392251650736676 1.1530581670984827 0.8553859281369023 0.0 0.0716848106496447 11.124355942251995 0.3811320110201683 0.8612650515588408 0.059667802135144755 8.550937866311564e-13 12.067986249268765 -0.29767223896158046 RKS(ph)FTSLYK ddPTM_A549_PD325901_60min_R1 3 RKSFTSLYK 9 2 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 RKS(0.994)FT(0.005)S(0.001)LYK;RKS(0.998)FT(0.002)SLYK;RKS(0.999)FT(0.001)SLYK 75.479 0.00043789999999999996 37221800.0 14551.9 13960.2 14147.599999999999 13598.2 15445.0 14298.5 13617.9 14964.6 16474.4 16404.0 16418.2 True False 16029.198175457412 15136.675047326162 15107.741212429963 14438.129930247102 14360.19648235742 14182.057756652572 14136.136636500813 14666.119313498402 15782.03825926922 15368.248640475855 14398.865483544847 1.113226468694754 1.0512408123143098 1.04923135990785 1.0027269125298188 0.9973144411112377 0.9849427215539971 0.9817535036114975 1.0185607560719958 1.096061233248208 1.0673235789332727 1.0 13.813667522762602 -5.184468030261216 1.6687946191387937 1.0301170932067147 1.1533793413196731 0.3570423669130868 0.03470865826850409 1.4268826200533493 3.263471341346336 0.006393948348201514 0.29807885284115454 6.539310660893078e-06 5.184468030261216 0.12326224811295838 RKS(ph)GETDHQQFPR ddPTM_A549_MK2206_60min_R1 2 RKSGETDHQQFPR 13 2 E7ESJ3;Q9UPS8;Q9UPS8-2 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 RKS(0.5)GET(0.5)DHQQFPR;RKS(0.774)GET(0.226)DHQQFPR 46.89 0.0073387 8782700.0 1816.04 1767.2 2137.8 2275.7 2128.91 1729.87 2094.22 1509.42 2725.3 3501.1 3127.2 True False 2122.543154084818 1857.1429316785072 2440.9721858576836 2833.246602160054 1815.7501591500245 1912.9236952052283 2474.7126659772393 1723.3849074048796 2108.023901409819 2710.199078380447 2350.629933670701 0.9029678060681773 0.7900618064445502 1.0384332092827158 1.2053137593358676 0.7724525809618114 0.8137919405365699 1.0527870127616272 0.7331587514984432 0.8967910563948136 1.1529671427897838 1.0 11.198831713962674 -4.3470812024439045 16.01600914654685 0.9334618543070498 0.9318031187619311 0.0 0.15224837633461993 0.0 0.0 0.01737953300772421 0.0 4.4969576492508376e-05 4.3470812024439045 -0.0016587355451186392 RKS(ph)GETDHQQFPR ddPTM_A549_PD325901_60min_R1 2 RKSGETDHQQFPR 13 2 E7ESJ3;Q9UPS8;Q9UPS8-2 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 RKS(0.824)GET(0.176)DHQQFPR;RKS(0.972)GET(0.028)DHQQFPR 73.834 0.00024513 12159900.0 2682.79 2629.6000000000004 1765.79 2248.81 2716.7 2368.86 2394.5299999999997 2515.6000000000004 2809.7 2793.3 3342.0 True False 2955.144865834387 2851.2056205820013 1885.6271279578646 2387.713886281932 2525.888364106207 2349.5687895530286 2485.6551494870923 2465.4243845499773 2691.618079994946 2616.930561292441 2930.9551866834913 1.008253172638326 0.9727905883843518 0.6433490134973838 0.8146538361044471 0.8617969921827308 0.8016392745368695 0.848069994648988 0.8411675469319327 0.9183416014765596 0.8928592880512842 1.0 11.517155194537462 -9.30510636186839 0.8964313266030204 0.9836839666279336 0.8421857568089675 0.11638342172847393 0.09392708566392197 0.46272970154713045 0.7904647148754006 0.026031492925156482 0.02019827255746132 4.953288663169813e-10 9.30510636186839 -0.1414982098189661 RKS(ph)GGNEVSIEER ddPTM_A549_MK2206_60min_R1 4 RKSGGNEVSIEER 13 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 RKS(1)GGNEVSIEER;RKS(1)GGNEVSIEER;RKS(1)GGNEVSIEER;RKS(1)GGNEVSIEER 165.44 8.4326e-20 377820000.0 8990.7 10630.6 8733.6 7315.5 12011.6 9902.4 9704.5 9200.2 14160.0 14697.7 14595.900000000001 True False 10508.11035848901 11171.652133036192 9972.155806158975 9107.797828405275 10244.7095516703 10950.26539531887 11467.682032917333 10504.35652443083 10952.782608873533 11377.479362004033 10971.335203653169 0.9577786261593833 1.0182582088382754 0.9089281861371356 0.8301448875039946 0.9337705358103614 0.998079558418078 1.0452403303746378 0.9574364769142367 0.998308993897711 1.0370186627982736 1.0 13.42145149093049 -7.251536481027338 6.326823277349528 0.9995224964578814 0.9277710837523087 0.3913318377661955 0.04696370993834606 0.1387599507780985 26.753152740852943 0.006975092691730149 0.011792169814132544 5.603553451628864e-08 7.251536481027338 -0.07175141270557273 RKS(ph)GGNEVSIEER ddPTM_A549_PD325901_60min_R1 2 RKSGGNEVSIEER 13 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 RKS(0.999)GGNEVS(0.001)IEER;RKS(1)GGNEVSIEER 120.11 3.633e-06 380490000.0 8257.3 8353.0 7973.5 8502.599999999999 8425.1 8498.1 8358.0 8571.1 9284.0 9062.0 8576.0 True False 9095.575017297018 9056.936624856045 8514.629658550586 9027.786291194345 7833.350041017128 8428.894291136074 8676.068263673093 8400.14268660213 8893.825765979669 8489.823773469407 7521.206367743153 1.2093239531767133 1.204186693201148 1.1320829720971377 1.200310940797023 1.0415018094188577 1.1206838210537342 1.1535474283597502 1.1168610826354328 1.1824998984369566 1.128784846255575 1.0 12.876748366934047 -10.844578525253954 0.8797906515281343 0.9911919680780182 1.151040523701385 0.11638388911045239 0.059937521907033435 0.39589867322908534 0.49280696030496557 0.04388981253463969 0.008625440802500356 1.4302813467249846e-11 10.844578525253954 0.15984855562336675 RKS(ph)GYSLNFSEGDGR ddPTM_A549_PD325901_60min_R1 2 RKSGYSLNFSEGDGR 15 2 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 RKS(0.882)GY(0.032)S(0.086)LNFSEGDGR;RKS(0.744)GY(0.113)S(0.142)LNFS(0.001)EGDGR 69.125 0.00048479999999999997 6724800.0 2589.9 3049.8 3020.4 2876.6 3702.8 3852.5 2773.1000000000004 3491.7 3818.7 3150.0 3575.8999999999996 True False 2852.8247414163907 3306.8173492740307 3225.3825071406754 3054.2810487673937 3442.728101966528 3821.1265172923045 2878.631837998545 3422.0553043143423 3658.213318886963 2951.108462417637 3136.0869694977537 0.9096765393190841 1.0544405756080226 1.0284735527143951 0.9739146517535956 1.097778261716346 1.2184376755037059 0.9179056148623199 1.091186353439167 1.1664897544192878 0.9410161424478157 1.0 11.614749853274436 -6.764764855575889 24.996524150936434 1.0807744050830321 0.9987450021300909 0.09671681432990364 0.09136066619014291 124.41915486203936 935230.6710123778 0.01286654191165095 0.02504795394805116 1.7188387834073336e-07 6.764764855575889 -0.08202940295294125 RKS(ph)HEAEVLK ddPTM_A549_MK2206_60min_R1 3 RKSHEAEVLK 10 2 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK 106.55 5.9532e-05 1353380700.0 18702.7 20793.5 18965.9 17073.8 27641.9 20671.100000000002 20128.2 19998.100000000002 27504.5 27780.5 27126.0 True False 21859.258522886143 21851.8003337806 21655.54980810095 21256.881766472005 23575.81312700351 22858.50208163435 23785.233396359083 22832.89191661271 21274.77466566116 21504.865755604824 20389.865560485865 1.0720648676197189 1.0716990884004582 1.0620741830720009 1.0425219187156562 1.1562515239282296 1.121071740950197 1.1665223257995974 1.1198157167284741 1.043399457566321 1.0546840385882559 1.0 14.315564642600881 -8.995948334182582 2.617400483090794 1.0167047470932844 1.1016421986572977 0.3675758248642399 0.03920082740034754 0.17405962729425725 2.3955518782030625 0.00791183753535962 0.007974707915407993 1.0093729589288222e-09 8.995948334182582 0.08493745156401333 RKS(ph)HEAEVLK ddPTM_A549_PD325901_60min_R1 6 RKSHEAEVLK 10 2 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK 139.74 3.0299e-08 2356331100.0 36155.21 34640.700000000004 34028.14 33903.5 38645.1 36465.259999999995 37170.9 37379.8 37446.59999999999 36762.899999999994 40009.99999999999 True False 39825.66030314113 37559.99336054724 36337.49420822871 35997.6421945649 35930.801494357416 36168.29901257841 38585.45894019693 36634.23056511417 35872.84962605926 34441.684220004216 35089.02364428679 1.1349891267101575 1.0704200191293374 1.0355800884230415 1.0258946660781783 1.0239897769343516 1.030758204595053 1.0996447017550295 1.0440367602271252 1.0223382100829725 0.9815515122094891 1.0 15.098732184709238 -2.000000000000001 0.618422225288163 1.0203993267844524 9.135999224749709 0.5466566823385879 0.02822711698569959 94.10950423912288 0.6261331935846869 0.004936725666828643 1040.4330415212146 0.00999999999999998 2.000000000000001 8.115599897965255 RKS(ph)IFVQK ddPTM_A549_PD325901_60min_R1 2 RKSIFVQK 8 2 A0A669KBL2;Q5VUG0 A0A669KBL2 SFMBT2 Scm-like with four MBT domains protein 2 1 RKS(1)IFVQK;RKS(1)IFVQK 67.334 0.0016552 7502300.0 2793.0 2708.9 2732.2 2654.3 3473.8999999999996 3089.7 2887.3 2671.1 3375.8 3278.7 2916.6000000000004 True False 3076.5433039020736 2937.1885098853777 2917.6235220532894 2818.2500826473274 3229.905248304398 3064.5385075867694 2997.1777814911834 2617.822815062587 3233.926865660724 3071.6823224535588 2557.87668985071 1.202772329138992 1.1482916754899573 1.1406427579679674 1.1017927853323586 1.2627290678710985 1.1980790628987008 1.171744436854035 1.0234358933132839 1.264301316202022 1.200871932037051 1.0 11.32073100109865 -11.022653011190844 1.282661933793287 0.9990613030445575 1.175396864151216 0.0 0.08761071153774366 0.3244504815330044 0.9424129298338269 0.05017892225635434 0.011065181329185875 9.491765251894625e-12 11.022653011190844 0.1763355611066585 RKS(ph)ISGK ddPTM_A549_MK2206_60min_R1 2 RKSISGK 7 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 RKS(1)ISGK;RKS(1)ISGK 101.65 0.0022361 15379500.0 3049.2 3037.2 2927.4 2057.0299999999997 4887.9 4863.0 4416.700000000001 5058.4 5653.6 5371.1 4678.9 True False 3563.8304142174356 3191.7805070699196 3342.5493389839 2561.0024423435866 4168.896384961974 5377.599432201859 5219.1572193091815 5775.4436907003 4373.0686269440275 4157.764779609041 3516.9999989293415 1.0133154436458205 0.9075292886100579 0.950397878874453 0.7281781186019951 1.1853558106997684 1.5290302626781143 1.4839798751487112 1.642150609172159 1.2434087655033534 1.1821907252984827 1.0 11.780129619186116 -6.868184621847121 7.558043968747677 1.2234609209103964 0.9049573541930723 0.4719891889167799 0.19863210143047869 0.2422094867918584 15.544072738547344 0.036033518523499335 0.06839447713577682 1.354613433585403e-07 6.868184621847121 -0.31850356671732405 RKS(ph)ISGK ddPTM_A549_PD325901_60min_R1 2 RKSISGK 7 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 RKS(1)ISGK;RKS(1)ISGK 105.4 0.0020178 24068000.0 3886.1 4402.9 3719.8999999999996 3909.4 4159.8 3952.3 3073.5 3742.7 3702.8 4908.5 5518.6 True False 4280.614011204381 4773.947834978895 3972.354783575887 4150.874759108409 3867.629998530939 3920.113779180889 3190.463724383732 3668.04891240865 3547.184192833856 4598.576472310147 4839.847185287708 0.884452307547375 0.9863840018525512 0.8207603735198815 0.8576458305804251 0.7991223380539493 0.8099664367704319 0.6592075332630719 0.7578852744687641 0.7329124364952425 0.9501491051802252 1.0 12.240745780817313 RKS(ph)LEDVTAEYIHK ddPTM_A549_PD325901_60min_R1 1 RKSLEDVTAEYIHK 14 2 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 RKS(0.895)LEDVT(0.105)AEYIHK 62.646 0.0012288 3076900.0 642.88 616.29 500.95 539.89 449.65 433.98 634.07 681.45 732.32 690.61 622.78 True False 708.1447043367579 668.2269211699435 534.947479457066 573.237779120847 418.0681352082884 430.44581076561036 658.1998808264174 667.857945162817 701.5431371113992 647.0047667397598 546.1820081276916 1.2965361249526937 1.2234509947711771 0.9794307968709233 1.0495361813288255 0.7654373981329471 0.7880995791882194 1.205092571765083 1.2227754397334138 1.2844493715863776 1.1845955324630484 1.0 9.09323798060353 RKS(ph)LSDS(ph)ESDDSK ddPTM_A549_MK2206_60min_R1 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 RKS(0.867)LS(0.162)DS(0.879)ES(0.022)DDS(0.069)K 101.5 0.00011757 45641000.0 9032.2 9331.4 8824.0 6643.2 11020.0 8209.2 7328.7 8135.1 11463.0 12634.0 12532.0 True False 10556.614543911423 9806.328402368055 10075.375885493588 8270.784298224578 9398.972598105725 9077.892095174067 8660.229925770644 9288.275337698877 8866.64880264952 9779.970625305928 9419.958534395375 1.1206646510561318 1.0410160900986896 1.0695775197634967 0.8780064442985834 0.9977721837932702 0.963687054675208 0.9193490495896864 0.9860208305359647 0.9412619779879563 1.0382180122763842 1.0 13.201504993931799 -6.1453841316835325 9.46122017642586 0.9650920583916776 1.0743761329198587 0.5570892609515796 0.044291295252616394 0.18077234531516193 13.728362957993511 0.005322668435081226 0.014118015451723498 7.155102643599018e-07 6.1453841316835325 0.10928407452818112 RKS(ph)LSDSES(ph)DDSK ddPTM_A549_PD325901_60min_R1 2 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 RKS(0.945)LS(0.083)DS(0.133)ES(0.539)DDS(0.3)K;RKS(0.918)LS(0.088)DS(0.292)ES(0.556)DDS(0.145)K 95.65799999999999 0.00013966 543730000.0 47899.0 47824.0 50291.0 48900.0 57885.0 49355.0 51317.0 53639.0 53829.0 54415.0 60116.0 True False 52761.67121861987 51854.29631834258 53704.04968435033 51920.44194004228 53819.35729240913 48953.06924359808 53269.896516739864 52569.12806601853 51566.75432538987 50979.227613478 52722.11310672194 1.0007503134750662 0.9835397950263736 1.0186247576162344 0.9847944037247351 1.0208118400616095 0.9285111380969419 1.0103900124205774 0.9970982756249975 0.9780858787091224 0.9669420402456947 1.0 15.686120574392652 RKS(ph)LSDSESDDS(ph)K ddPTM_A549_MK2206_60min_R1 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 RKS(0.936)LS(0.068)DS(0.097)ES(0.187)DDS(0.712)K 108.71 5.8296000000000006e-05 37014000.0 9439.6 10852.0 9493.4 9023.2 12609.0 10128.0 8245.3 9726.6 13945.0 15446.0 14386.0 True False 11032.773703937726 11404.320447360327 10839.706871185956 11233.88440506684 10754.232803041305 11199.73823757771 9743.364281108068 11105.375336463216 10786.479765589074 11956.737872287104 10813.55916659846 1.0202721910484744 1.0546315298839484 1.002418047951156 1.0388702028622274 0.9945137061125623 1.0357124851336739 0.9010321329913217 1.0269861352186553 0.9974957920336692 1.1057171545534943 1.0 13.400553828327638 -6.923109981603633 1.7882452627986185 0.9951930152246333 1.0295040179816264 0.0 0.04814067753279702 0.4683536337256779 3.012158020381719 0.0048755040361009895 0.010711819949584287 1.1936857748103924e-07 6.923109981603633 0.03431100275699306 RKS(ph)LSDSESDDSK ddPTM_A549_MK2206_60min_R1 5 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.92)LS(0.076)DS(0.003)ESDDSK;RKS(0.832)LS(0.166)DS(0.002)ESDDSK;RKS(0.995)LS(0.005)DSESDDSK;RKS(0.986)LS(0.013)DSESDDSK;RKS(0.887)LS(0.09)DS(0.017)ES(0.005)DDS(0.002)K 222.51 1.111e-46 1410650100.0 20745.1 21734.3 17592.5 16785.6 22127.8 18301.7 16836.8 17410.7 23765.399999999998 24698.5 25206.199999999997 True False 24246.365711000308 22840.4830352989 20087.381036439932 20898.07275353422 18872.829932519402 20238.373746314774 19895.828620930744 19878.720043032525 18382.574845545405 19119.09169614677 18946.804884270394 1.279707362750624 1.2055057923914672 1.0601988651456713 1.1029866450402814 0.9960956503113406 1.0681681618580787 1.0500888536329536 1.049185874053931 0.9702203066864634 1.009093185522769 1.0 14.209666957958113 -2.000000000006688 0.3746702261199509 0.9900455295147969 5.169385383079945 0.8442269534505101 0.03536999556193293 13.735126087809045 0.1649829658800565 0.008550452795766142 42.06960922308381 0.009999999999846004 2.000000000006688 4.179339853565148 RKS(ph)LSDSESDDSK ddPTM_A549_PD325901_60min_R1 7 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.652)LS(0.115)DS(0.115)ES(0.115)DDS(0.003)K;RKS(1)LSDSESDDSK;RKS(0.844)LS(0.143)DS(0.012)ESDDSK;RKS(0.81)LS(0.097)DS(0.08)ES(0.013)DDSK;RKS(1)LSDSESDDSK;RKS(0.962)LS(0.037)DSESDDSK;RKS(0.963)LS(0.028)DS(0.008)ES(0.001)DDSK 219.23 1.4153999999999998e-38 1933373400.0 30396.899999999998 30621.9 31889.64 30624.3 37217.7 32941.24 36774.0 35102.299999999996 37378.45 39127.3 43536.700000000004 True False 33482.7709109849 33202.5149805674 34053.86273838355 32515.893458168433 34603.657146094745 32672.97746307332 38173.45469350495 34402.15708927836 35807.56373356125 36656.79560049322 38181.96190188005 0.8769264134993607 0.8695864048550248 0.8918835241074075 0.8516035279100568 0.9062828472517774 0.8557176173145918 0.9997771930002717 0.9010054846758522 0.9378136153815111 0.9600553186526611 1.0 15.220603614124563 -8.938778866217845 0.22173630716155698 1.0285409366507932 0.8446917265317165 0.5397409540467029 0.034711068822057864 0.9877952106293261 0.18493111200998333 0.06761692354483381 0.05329440371611685 1.151386501944513e-09 8.938778866217845 -0.18384921011907662 RKS(ph)LSDSESDDSKSK ddPTM_A549_MK2206_60min_R1 2 RKSLSDSESDDSKSK 15 3 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.848)LS(0.149)DS(0.001)ES(0.001)DDSKSK;RKS(0.988)LS(0.011)DSESDDSKSK 60.317 0.0016618 18924200.0 1974.35 2398.1000000000004 2609.7 1982.3200000000002 3159.5 1601.49 1206.63 758.44 3969.5 4462.6 4875.1 True False 2307.572011776924 2520.1530468867313 2979.7947017648025 2467.9884889897253 2694.741735364342 1770.9586088169751 1425.8590521282945 865.9511926250866 3070.414587988948 3454.4955605896944 3664.4781240848147 0.6297136819047674 0.6877249533359207 0.8131566353691883 0.6734897590925293 0.7353684874397607 0.4832771676756191 0.38910289646889235 0.23630955440383578 0.837885910085974 0.9426978258882192 1.0 11.839392036525988 -8.971347726369004 15.32336138188027 0.9285046697949251 0.5875157307652533 0.4980982090301216 0.15692518187958773 1.8115512412621126 968.6890050438702 0.030856624585895415 0.03226417198234968 1.0681992621086158e-09 8.971347726369004 -0.34098893902967176 RKS(ph)LSDSESDDSKSK ddPTM_A549_PD325901_60min_R1 2 RKSLSDSESDDSKSK 15 3 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.999)LS(0.001)DSESDDSKSK;RKS(0.995)LS(0.004)DS(0.001)ESDDSKSK 104.89 1.5945e-06 32332000.0 2975.2 2947.0 3357.0 3944.7 3303.8999999999996 7126.4 5736.2 6730.3 5617.9 5628.200000000001 6188.700000000001 True False 3277.2401137735196 3195.3540324974006 3584.8262072809052 4188.355159936293 3071.845461836236 7068.364961150391 5954.494229969084 6596.058886681787 5381.799199773504 5272.834491485379 5427.5291334015965 0.6038180603407602 0.5887308854470903 0.6604895375355059 0.7716872737100029 0.5659749374594362 1.3023172768711484 1.0970911594604786 1.2152968182315105 0.9915744471371576 0.9714981461888044 1.0 12.406079849491674 -7.244205321858867 24.98732254181368 1.041767582248098 0.6440560794578163 0.8011758783407605 0.11184299248343019 324.93416101236943 471115.7861149838 0.01734818143781088 0.03000054894285823 5.698947788275892e-08 7.244205321858867 -0.3977115027902818 RKS(ph)LTFTGGAK ddPTM_A549_MK2206_60min_R1 2 RKSLTFTGGAK 11 2 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 RKS(0.873)LT(0.127)FTGGAK;RKS(0.996)LT(0.004)FTGGAK 107.37 2.8735e-05 7900500.0 2919.5 3657.0 3594.7 3103.1 3763.3999999999996 3550.3999999999996 3705.1 2829.2 4269.8 4728.200000000001 4690.799999999999 True False 3412.240225077988 3843.1256796900784 4104.482513098798 3863.3596393034513 3209.8088453458336 3926.10097143522 4378.268710408776 3230.2477640616175 3302.6971174695045 3660.096336122486 3525.944900506052 0.9677519987871209 1.0899562494974053 1.164080162599737 1.0956948416150725 0.9103400466879543 1.1134890312301071 1.241729191451743 0.9161367676500006 0.9366842678101673 1.0380469461100144 1.0 11.78379421468383 -8.326180326539193 24.999669098210436 0.9652181682511193 1.0816436316263223 0.2647436092884049 0.08829556176184684 194.16717596244956 74976.97664874654 0.014211849533876629 0.01718128942458693 4.718670732563527e-09 8.326180326539193 0.11642546337520299 RKS(ph)LTFTGGAK ddPTM_A549_PD325901_60min_R1 3 RKSLTFTGGAK 11 2 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 RKS(0.94)LT(0.06)FTGGAK;RKS(0.981)LT(0.019)FTGGAK;RKS(0.994)LT(0.005)FT(0.001)GGAK 112.15 1.0689e-05 17141700.0 8079.0 8207.599999999999 8485.7 8327.0 9835.3 10502.1 9312.8 9125.6 10715.2 9871.7 9168.0 True False 8899.174132554548 8899.283256574701 9061.590630659399 8841.33987801088 9144.50245794301 10416.574379560163 9667.2037001597 8943.58274910529 10264.87740711174 9248.399177285137 8040.394120740355 1.1068081985681464 1.106821770542171 1.1270082653392384 1.0996152359253721 1.137320176178253 1.295530321416758 1.2023295817331836 1.1123313875914542 1.276663463627148 1.1502420202796664 1.0 12.97305050523318 -6.987307704291385 20.7015937836134 1.151160514270082 1.1119701968309141 0.0950536881933084 0.07627813451023567 113.82770028164627 185643.45756315856 0.01587330701805862 0.029964710487017095 1.0296563346582764e-07 6.987307704291385 -0.0391903174391679 RKS(ph)LVGTPYWMAPELISR ddPTM_A549_MK2206_60min_R1 12 RKSLVGTPYWMAPELISR 18 2 O96013;O96013-4;O96013-2;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RKS(0.998)LVGT(0.002)PYWMAPELISR;RKS(0.998)LVGT(0.002)PYWMAPELISR;RKS(0.806)LVGT(0.167)PY(0.028)WMAPELISR;RKS(0.998)LVGT(0.002)PYWMAPELISR;RKS(0.998)LVGT(0.002)PYWMAPELISR;RKS(0.993)LVGT(0.007)PYWMAPELISR;RKS(0.979)LVGT(0.021)PYWMAPELISR;RKS(0.979)LVGT(0.02)PYWMAPELISR;RKS(0.499)LVGT(0.499)PY(0.003)WMAPELISR;RKS(1)LVGTPYWMAPELISR;RKS(0.993)LVGT(0.007)PYWMAPELISR;RKS(1)LVGTPYWMAPELISR 182.23 4.2888999999999995e-40 571574700.0 28123.78 29353.85 23643.23 22998.280000000002 41956.97 30472.980000000003 32164.78 30624.49 45863.54 39648.869999999995 42202.34 True False 32870.38650359439 30847.835584569486 26996.19553458506 28632.85963243202 35785.15529306209 33697.61051727299 38008.704178343934 34965.60524106721 35475.521419023695 30692.162729663873 31722.33425266961 1.036190661184656 0.972432713774002 0.851015417704111 0.9026088497892429 1.128074466652799 1.0622676833574172 1.1981685797647532 1.1022393548521627 1.1183137135010244 0.9675253556437435 1.0 14.953211313606678 -6.756940828903734 24.998110612220238 1.076241784273617 0.9364422048666782 0.4692880841345122 0.07230840953814406 83.00457121993453 461244.0396975069 0.010795602107794983 0.0218798592102813 1.750085115325898e-07 6.756940828903734 -0.13979957940693877 RKS(ph)LVGTPYWMAPELISR ddPTM_A549_PD325901_60min_R1 12 RKSLVGTPYWMAPELISR 18 2 O96013;O96013-4;O96013-2;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RKS(0.96)LVGT(0.04)PYWMAPELISR;RKS(0.968)LVGT(0.032)PYWMAPELISR;RKS(0.995)LVGT(0.005)PYWMAPELISR;RKS(0.93)LVGT(0.07)PYWMAPELISR;RKS(0.982)LVGT(0.018)PYWMAPELISR;RKS(0.993)LVGT(0.007)PYWMAPELISR;RKS(0.981)LVGT(0.019)PYWMAPELISR;RKS(0.978)LVGT(0.022)PYWMAPELISR;RKS(0.963)LVGT(0.037)PYWMAPELISR;RKS(0.996)LVGT(0.004)PYWMAPELISR;RKS(1)LVGTPYWMAPELISR;RKS(1)LVGTPYWMAPELISR 217.89 2.1781999999999996e-56 912930000.0 57668.189999999995 57904.66000000001 63559.1 63539.51 62381.380000000005 64890.3 61162.85999999999 61469.58 74383.4 69885.48 78388.20000000001 True False 63522.62219572231 62784.488914621994 67872.60273791714 67464.20122400289 57999.927072878054 64361.85491111038 63490.44610690121 60243.52100494738 71257.32437324134 65472.89886606941 68746.94834374107 0.9240064283014187 0.913269467623403 0.9872816811962021 0.9813410318473436 0.8436727515943411 0.9362139914821409 0.9235383916889393 0.8763082937692628 1.0365161812993962 0.9523753481928956 1.0 16.069008053698617 -8.772777657204086 24.999800637838284 1.0172437581599438 0.9247404461184022 0.327705964624056 0.043874389697452804 122.91039848125935 271004.62014811096 0.006985180512274973 0.0074684407387930205 1.6874166995509112e-09 8.772777657204086 -0.09250331204154161 RKS(ph)LVMHT(ph)PPVLK ddPTM_A549_MK2206_60min_R1 2 RKSLVMHTPPVLK 13 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 RKS(1)LVMHT(1)PPVLK;RKS(1)LVMHT(1)PPVLK 50.053000000000004 0.014362 6127200.0 2079.73 2292.5 2428.1 2312.0 3878.0 2662.0 2428.1000000000004 2336.6000000000004 4024.7999999999997 3591.1 3202.5 True False 2430.737579483283 2409.1784579408 2772.4410910660686 2878.4401037896228 3307.5513371555367 2943.6910731074095 2869.2543401645185 2667.820205537388 3113.189226284898 2779.868015872734 2407.2308654964236 1.009765043446305 1.0008090592690098 1.1517138346821298 1.1957474229194986 1.37400669979921 1.2228536594890977 1.1919315181981167 1.1082527412621994 1.2932657481703111 1.1547990912369197 1.0 11.233158794789754 -5.7868627771163625 5.321104598691849 1.1688525166201638 1.0036315857299727 0.3533879841826174 0.09257682170578782 0.1975282001837748 15.07543141912042 0.01721071469630639 0.059566562110362146 1.6335680205440755e-06 5.7868627771163625 -0.16522093089019108 RKS(ph)LVMHT(ph)PPVLK ddPTM_A549_PD325901_60min_R1 2 RKSLVMHTPPVLK 13 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 RKS(1)LVMHT(1)PPVLK;RKS(1)LVMHT(1)PPVLK 70.335 0.0013997 12285000.0 5099.9 4869.4 5182.4 4537.4 5469.6 5180.5 4016.9 5486.7 5238.9 5272.3 5304.6 True False 5617.638093652051 5279.761427160785 5534.108828302822 4817.664892816926 5085.434165095638 5138.311725589304 4169.765327632022 5377.263464267118 5018.727251765501 4939.406078223656 4652.16782862994 1.2075312629695996 1.1349034733159382 1.1895763506736199 1.0355741818187425 1.0931321380538617 1.1044983575114342 0.8963058688405088 1.1558618825346028 1.0787932500800412 1.0617428820658663 1.0 12.183687428155226 -2.000000000043111 0.2654664144340503 1.0271938866521566 2.2813880555873136 0.3632551156751741 0.06792844215161309 33.86577132203854 0.41731023185620586 0.027250331336187802 19.673719359061128 0.009999999999007336 2.000000000043111 1.254194168935157 RKS(ph)NEMITNLGK ddPTM_A549_MK2206_60min_R1 1 RKSNEMITNLGK 12 2 Q7Z2T5 Q7Z2T5 TRMT1L TRMT1-like protein 1 RKS(0.999)NEMIT(0.001)NLGK 87.932 5.7334e-05 6070200.0 1945.8 2372.4 2636.8 2790.7 3355.9 2668.1 2233.7 2333.4 3575.1 3123.5 3406.4 True False 2274.2034697574068 2493.145026660306 3010.73788926445 3474.4216252792817 2862.251555533849 2950.436571058557 2639.534376518877 2664.166595737799 2765.3455582615657 2417.8991806350377 2560.4968681427067 0.8881883426817206 0.9736957922814194 1.175841269998636 1.3569325815264532 1.1178500513496135 1.1522906384957614 1.0308680355596378 1.0404881290365688 1.080003491770505 0.9443085874144793 1.0 11.322208079125677 -7.7730409882705995 24.66640031399273 1.0385140719023178 1.1190325322582737 0.12272279239159434 0.11579163039429809 357.6506294381851 760406.6489933879 0.018698982197324424 0.025956833703763643 1.6863938577441797e-08 7.7730409882705995 0.08051846035595589 RKS(ph)NEMITNLGK ddPTM_A549_PD325901_60min_R1 4 RKSNEMITNLGK 12 2 Q7Z2T5 Q7Z2T5 TRMT1L TRMT1-like protein 1 RKS(1)NEMITNLGK;RKS(1)NEMITNLGK;RKS(1)NEMITNLGK;RKS(1)NEMITNLGK 115.82 5.2366e-06 22196400.0 9306.9 9877.1 10806.5 8912.6 11176.4 11329.5 10058.199999999999 10876.8 12251.0 10320.6 12957.199999999999 True False 10251.72963662234 10709.477880685463 11539.894074763512 9463.111060016783 10391.408220486848 11237.236308283758 10440.97030505823 10659.853691315466 11736.133074000096 9668.955554675387 11363.546542458203 0.9021593389280604 0.9424415028064601 1.0155187055068073 0.8327603556389086 0.9144511514658645 0.9888846115336875 0.9188126493825758 0.9380745396242719 1.0327878739396876 0.8508748143503237 1.0 13.472125547199798 -8.742604992375087 13.171433876895447 1.0154828680914734 0.9323973765560843 0.0 0.06688969104779852 0.7718572509719133 538.0908772959998 0.007499098419095233 0.008452716534016207 1.8088185684883326e-09 8.742604992375087 -0.08308549153538902 RKS(ph)NFSNSADDIK ddPTM_A549_MK2206_60min_R1 6 RKSNFSNSADDIK 13 2 P45973 P45973 CBX5 Chromobox protein homolog 5 1 RKS(0.999)NFS(0.001)NSADDIK;RKS(0.999)NFS(0.001)NSADDIK;RKS(1)NFSNSADDIK;RKS(0.997)NFS(0.003)NSADDIK;RKS(0.977)NFS(0.019)NS(0.003)ADDIK;RKS(0.966)NFS(0.015)NS(0.019)ADDIK 185.25 6.750399999999999e-26 260566600.0 16933.4 17628.8 17405.7 15261.600000000002 21576.6 18217.2 16692.0 17054.800000000003 24489.3 25183.6 24842.7 True False 19791.343938118032 18526.03062130721 19874.089987549392 19000.69268511925 18402.710722349177 20144.932012401325 19724.72033525231 19472.370128134495 18942.512651376168 19494.60726923019 18673.57196636004 1.0598584980833679 0.9920989221923572 1.0642896829461475 1.0175178438998447 0.9854949420229395 1.078793711706143 1.056290696326653 1.0427769343333706 1.0144022089346707 1.0439677692275064 1.0 14.188710298825027 -8.953326967529284 3.070999404997052 1.0057749810060135 1.036141710985134 0.014651236202731788 0.03016035980438913 0.29483700051755224 5.450178346344434 0.005028431708049822 0.005164151752272054 1.1134559297632097e-09 8.953326967529284 0.0303667299791206 RKS(ph)NFSNSADDIK ddPTM_A549_PD325901_60min_R1 4 RKSNFSNSADDIK 13 2 P45973 P45973 CBX5 Chromobox protein homolog 5 1 RKS(1)NFSNSADDIK;RKS(1)NFSNSADDIK;RKS(0.996)NFS(0.004)NSADDIK;RKS(1)NFSNSADDIK 188.71 4.1790000000000003e-26 427953000.0 16693.699999999997 16308.8 16011.800000000001 16267.199999999999 17694.5 14948.1 17222.1 18023.2 16726.9 17700.9 18024.6 True False 18388.432134747578 17683.199811738566 17098.457034775234 17271.987998508303 16451.699362711126 14826.367629626753 17877.496439794737 17663.71313707312 16023.926562361625 16583.262153145508 15807.688467353453 1.1632587631470572 1.1186455153299915 1.0816544790901919 1.092632109633168 1.0407403585089436 0.9379212944540655 1.1309367891906472 1.1174127813533767 1.0136792988712267 1.0490630674683268 1.0 13.948338799712651 -2.0000000000000018 0.20560811687926686 0.9981876056048952 1.7575392461299963 0.2886805202670246 0.05360210276877761 34.7854576680788 0.3918274357942247 0.03978847683391606 8.695517356274296 0.009999999999999959 2.0000000000000018 0.7593516405251012 RKS(ph)NLPIFLPR ddPTM_A549_PD325901_60min_R1 3 RKSNLPIFLPR 11 2 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 RKS(1)NLPIFLPR;RKS(1)NLPIFLPR;RKS(1)NLPIFLPR 85.45700000000001 8.786799999999999e-05 8231200.0 2309.2599999999998 2282.49 2438.41 2558.93 3318.1099999999997 3001.6900000000005 2607.2000000000003 3158.94 2937.7599999999998 2895.8500000000004 2854.6099999999997 True False 2543.6943752126394 2474.843442699351 2603.8951659505033 2716.9892943483087 3085.0574004580753 2977.2452318471483 2706.4184227145847 3095.932463559511 2814.296163535591 2713.0055367911477 2503.5110668637235 1.0160507811931727 0.988549032379439 1.0400973258778266 1.085271533371738 1.2322922959245732 1.189227909256617 1.081049114795827 1.2366362204413754 1.1241396935629304 1.0836802651684974 1.0 11.289737117584902 -6.112301114493273 3.1530423755827903 1.097242991169804 1.0039513003366776 0.2702654333148503 0.07219459686695427 0.3765292823420021 7.048587896816314 0.012706688779088374 0.038962871887973594 7.721450390713285e-07 6.112301114493273 -0.0932916908331265 RKS(ph)PENTEGK ddPTM_A549_MK2206_60min_R1 2 RKSPENTEGK 10 2 A0A087WZE9;Q15651-2;Q15651 A0A087WZE9;Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 RKS(0.996)PENT(0.004)EGK;RKS(1)PENTEGK 75.483 0.00050589 110045000.0 6558.3 5697.8 3963.8999999999996 2322.8 1388.73 1215.6399999999999 524.93 1074.79 1343.19 7790.2 7385.799999999999 True False 7665.180704959399 5987.793682728496 4526.040624717591 2891.886104274455 1184.4496566395064 1344.2782179234766 620.3029861960214 1227.1447739063292 1038.9596096336752 6030.388409471127 5551.7020222899255 1.3806902233196083 1.078550984668787 0.8152528011311966 0.5209008143202958 0.2133489246872355 0.24213803488123783 0.1117320388784417 0.2210393801719505 0.1871425385336392 1.0862233573162408 1.0 12.438714420571555 -5.791059066831554 1.677090096018577 0.4837246105612694 1.364638105492863 0.49259353922449234 0.31208948051309826 0.35563340160822 1.7288753008281246 0.0534381336237109 0.3639302520522605 1.6178599833575407e-06 5.791059066831554 0.8809134949315935 RKS(ph)PENTEGK ddPTM_A549_PD325901_60min_R1 2 RKSPENTEGK 10 2 A0A087WZE9;Q15651-2;Q15651 A0A087WZE9;Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 RKS(1)PENTEGK;RKS(0.997)PENT(0.003)EGK 134.68 2.4088e-07 545710000.0 14223.4 15482.099999999999 11081.3 10285.0 11750.900000000001 7755.5 6240.3 7869.0 10368.3 15369.0 17746.3 True False 15667.349097286327 16786.830901434667 11833.34365527016 10920.281091070236 10925.55732240426 7692.341779327827 6477.778031323185 7712.046621888922 9932.556407734488 14398.598717110057 15563.617603064411 1.0066649989011225 1.0785944071338152 0.7603208943491534 0.7016544205583719 0.7019934311578732 0.4942515278590009 0.4162128752153187 0.49551761155905377 0.6381907253862886 0.9251447243393486 1.0 13.925889818497659 -5.791455787708407 6.86536866224594 0.733012384457325 1.04314585251248 0.3607700249788822 0.17479530223198916 0.1780975206498578 27.619027430090377 0.03079734610588142 0.10068244496395835 1.61638276964062e-06 5.791455787708407 0.31013346805515496 RKS(ph)PENTEGKDGSK ddPTM_A549_MK2206_60min_R1 4 RKSPENTEGKDGSK 14 3 A0A087WZE9;Q15651-2;Q15651 A0A087WZE9;Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 RKS(0.997)PENT(0.003)EGKDGSK;RKS(1)PENTEGKDGSK;RKS(1)PENTEGKDGSK;RKS(1)PENTEGKDGSK 101.92 4.9802e-06 218169000.0 9179.5 9435.699999999999 7902.6 5115.7699999999995 4300.48 2811.32 3088.01 3177.19 4914.639999999999 15226.5 15816.800000000001 True False 10728.775182772179 9915.93682686674 9023.307510505621 6369.133879655639 3667.885088811408 3108.8120163968156 3649.061445151122 3627.566412236295 3801.481887067386 11786.823074736474 11889.052038527354 0.9024079588519579 0.8340393157278992 0.7589593755048699 0.5357141897449846 0.308509465424607 0.2614852728646893 0.30692619002138 0.30511822140914996 0.31974642509330453 0.9914014201082139 1.0 13.53734606739694 -6.076103480085425 3.021096313343559 0.5554163398083463 0.8631322565896223 0.23498993369478471 0.2555803643256808 0.41879254983834446 7.391192151965746 0.04552753183516507 0.14552910478687375 8.392599907871555e-07 6.076103480085425 0.3077159167812761 RKS(ph)PENTEGKDGSK ddPTM_A549_PD325901_60min_R1 4 RKSPENTEGKDGSK 14 3 A0A087WZE9;Q15651-2;Q15651 A0A087WZE9;Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 RKS(1)PENTEGKDGSK;RKS(1)PENTEGKDGSK;RKS(1)PENTEGKDGSK;RKS(1)PENTEGKDGSK 145.91 7.196e-14 520943000.0 10059.0 9683.3 9324.5 10047.0 9722.7 10139.5 9033.0 10020.3 9918.7 11764.0 14419.899999999998 True False 11080.182274955576 10499.345674544302 9957.316642773554 10667.580371607464 9039.811093494101 10056.927273740508 9376.755758047258 9820.437255726718 9501.851532208379 11021.219032343204 12646.343715277459 0.8761569766263845 0.8302277647143602 0.7873672317433997 0.8435307952859495 0.7148161790489315 0.7952438665407459 0.7414598218392274 0.7765435984365272 0.7513516749295399 0.8714945031131001 1.0 13.62643271574979 -10.756723310431111 0.9385229002896417 1.0038052073365804 0.7878424325373893 0.43510779982562064 0.05745571976041298 0.2323047831411263 0.35309316502402927 0.034632044774912545 0.008231710906338284 1.7509618733891253e-11 10.756723310431111 -0.21596277479919113 RKS(ph)PGVAAAVAEDGGLK ddPTM_A549_MK2206_60min_R1 2 RKSPGVAAAVAEDGGLK 17 2 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 RKS(1)PGVAAAVAEDGGLK;RKS(1)PGVAAAVAEDGGLK 96.71799999999999 4.4383999999999993e-07 12081800.0 1672.28 1844.7 1513.79 1297.45 1779.94 1757.48 1537.17 1479.75 1910.47 2035.0 1954.84 True False 1954.5199806793685 1938.5873506492442 1728.4681846896349 1615.3253082447434 1518.1131838722597 1943.4553670791943 1816.4538915492324 1689.509094044316 1477.751595393687 1575.2920866311188 1469.3992771606645 1.3301490010639638 1.3193060462063086 1.1763094017778286 1.0993099924249679 1.0331522598852272 1.322618975854237 1.2361880938577736 1.1497957841036726 1.0056841720033793 1.072065374685002 1.0 10.521010754695185 -2.0000000000000004 0.11833205350715073 0.8982131876151287 2.223246602670433 0.3914033233415719 0.09521102506993614 50.682711733716154 0.39864873482669255 0.3818352162549313 11.12026135896022 0.00999999999999999 2.0000000000000004 1.3250334150553045 RKS(ph)PGVAAAVAEDGGLK ddPTM_A549_PD325901_60min_R1 2 RKSPGVAAAVAEDGGLK 17 2 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 RKS(1)PGVAAAVAEDGGLK;RKS(1)PGVAAAVAEDGGLK 116.21 2.9748e-10 15930600.0 2200.72 2240.5 1948.4299999999998 2695.1000000000004 2701.7 2306.3599999999997 2564.8 2303.34 2453.03 2694.9 2432.4 True False 2424.135474315564 2429.3147980354324 2080.6621766614066 2861.5702059838013 2511.9419123590187 2287.57776883122 2662.4048675124122 2257.3980767647263 2349.937679741611 2524.7435540854876 2133.230220254017 1.1363684291079035 1.1387963544535569 0.9753575384909227 1.3414258708762605 1.177529686439519 1.072353910567995 1.2480626058238493 1.0582064961070747 1.1015865317442342 1.1835307460555529 1.0 11.058823955776967 -9.743971323514069 0.5558163962622635 1.0020600809875286 1.1508212099651511 0.0 0.10490971362304809 0.8131163398768165 0.531692068430189 0.052621518463558566 0.023169693961081896 1.803136798140025e-10 9.743971323514069 0.1487611289776225 RKS(ph)PLQDPFPEEDYSSTEGSGGR ddPTM_A549_MK2206_60min_R1 3 RKSPLQDPFPEEDYSSTEGSGGR 23 2 P48551 P48551 IFNAR2 Interferon alpha/beta receptor 2 1 RKS(1)PLQDPFPEEDYSSTEGSGGR;RKS(1)PLQDPFPEEDYSSTEGSGGR;RKS(0.997)PLQDPFPEEDY(0.001)SSTEGSGGR 111.68 1.5675e-11 37959100.0 4626.0 4520.700000000001 3777.5 3904.7000000000003 5938.8 4293.1 3657.1699999999996 4023.59 6216.200000000001 5734.8 6982.0 True False 5406.755705158685 4750.784320529103 4313.2063018418 4861.351675288647 5065.2103870807905 4747.392992470856 4321.6304498247455 4593.946204227587 4808.240625231613 4439.3046970084215 5248.176706602976 1.0302160173753663 0.9052256785774608 0.8218485281593423 0.9262934438111342 0.9651371648191672 0.9045794869097947 0.8234536852365318 0.8753413730234596 0.9161735387419675 0.8458756145583142 1.0 12.357600581113498 -10.251932710701029 0.8719090683109292 0.9952747115572957 0.9045128091383282 0.0 0.0714360556883107 0.5566259638955112 0.8227510301078965 0.028056943850180188 0.010966382019684529 5.598443366857879e-11 10.251932710701029 -0.09076190241896753 RKS(ph)PLQDPFPEEDYSSTEGSGGR ddPTM_A549_PD325901_60min_R1 4 RKSPLQDPFPEEDYSSTEGSGGR 23 2 P48551 P48551 IFNAR2 Interferon alpha/beta receptor 2 1 RKS(1)PLQDPFPEEDYSSTEGSGGR;RKS(1)PLQDPFPEEDYSSTEGSGGR;RKS(1)PLQDPFPEEDYSSTEGSGGR;RKS(1)PLQDPFPEEDYSSTEGSGGR 102.46 8.839700000000001e-11 76992700.0 7909.6 7613.200000000001 7905.8 7736.5 9246.6 8847.9 7711.5 8342.400000000001 9093.199999999999 9597.5 9448.4 True False 8712.576769260237 8254.791082527725 8442.33512943741 8214.366034133678 8597.150715038275 8775.845635911892 8004.965352394719 8176.00428751381 8711.044426454799 8991.512212080399 8286.3066983424 1.0514427098146282 0.9961966631260488 1.0188296712606864 0.9913181267810045 1.037512975081897 1.059078061601005 0.9660474375147181 0.9866885918124833 1.0512577851115943 1.0851049254403133 1.0 13.01651350396412 -8.759169025253312 24.99668220937104 1.024205063060754 1.0130108592062754 0.06431773573375543 0.03426056903516277 228.39077818908908 2514606.6714611836 0.005419494743469674 0.005991307869928783 1.741129102716724e-09 8.759169025253312 -0.011194203854478557 RKS(ph)PPKEYIDEEGVR ddPTM_A549_MK2206_60min_R1 4 RKSPPKEYIDEEGVR 15 3 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 RKS(1)PPKEYIDEEGVR;RKS(1)PPKEYIDEEGVR;RKS(1)PPKEYIDEEGVR;RKS(1)PPKEYIDEEGVR 121.44 8.716100000000001e-08 129478000.0 7227.25 7228.799999999999 6975.42 6600.48 10625.6 7882.03 7675.69 7846.51 11511.07 11151.0 11025.8 True False 8447.033110702136 7596.715043298779 7964.63944460445 8217.597896306803 9062.588315647201 8716.101182931934 9070.263517259335 8958.77682142907 8903.831024401543 8631.98135529416 8287.789563400614 1.019214236327229 0.9166153393718317 0.9610088894844513 0.9915307131585746 1.0934867791127498 1.0516798377003647 1.0944128645971143 1.0809609429505276 1.0743312141661276 1.0415299868873984 1.0 13.016771656449507 -6.568536960204739 6.10155641293373 1.048560389328518 0.9629900630638477 0.5938737920749577 0.03514477972004707 0.12732239678896362 11.386244616108437 0.006025783728057974 0.012752582061451247 2.7006172651683106e-07 6.568536960204739 -0.08557032626467032 RKS(ph)PPKEYIDEEGVR ddPTM_A549_PD325901_60min_R1 2 RKSPPKEYIDEEGVR 15 3 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 RKS(1)PPKEYIDEEGVR;RKS(1)PPKEYIDEEGVR 110.61 7.8124e-07 112179000.0 7713.7 7904.200000000001 8606.9 7863.1 9276.3 8840.6 7809.799999999999 7909.1 10072.8 8554.7 9367.0 True False 8496.789145474195 8570.314673792316 9191.015991494207 8348.78582860422 8624.764689497702 8768.605084691588 8107.006212686537 7751.346795931077 9649.475245105557 8014.554782045761 8214.918382305286 1.0343120588728003 1.0432623034031043 1.1188201225822778 1.0162956514074784 1.049890490461258 1.0674001464918905 0.9868638780573659 0.9435695444798661 1.1746282550889693 0.9756097880788319 1.0 13.004030526297772 -8.7612359053077 24.999999999966768 1.0824633346668924 1.0354591829058952 0.0 0.06475440470786033 11.209489945455733 1377252.3035797596 0.01263827507757279 0.013903643791552522 1.7328624649549109e-09 8.7612359053077 -0.04700415176099715 RKS(ph)QLDSLK ddPTM_A549_MK2206_60min_R1 2 RKSQLDSLK 9 2 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 RKS(0.998)QLDS(0.002)LK;RKS(1)QLDSLK 66.498 0.0010970999999999997 23041000.0 2725.8999999999996 3285.3999999999996 3266.0 3080.7 4211.9 3253.0 3118.8 2827.7 4461.299999999999 4074.7 2957.3 True False 3185.9652781435457 3452.612826922008 3729.167910473943 3835.471638297877 3592.335089470192 3597.2303008333606 3685.445589598904 3228.53513446806 3450.822673232165 3154.2224399979464 2222.920792672155 1.4332338285043986 1.5531875172086766 1.677598195476475 1.7254198399427843 1.6160427763833525 1.6182449292352694 1.6579293341211045 1.4523842437890302 1.5523822012047308 1.4189540402860152 1.0 11.118240827694136 -10.608836208922986 0.507658423067409 0.893672113537022 1.6168930123729655 0.40471260320222535 0.1470874375238522 0.34879725946522017 0.12811060416963616 0.12236109234818685 0.020539155118639317 2.461295689301332e-11 10.608836208922986 0.7232208988359434 RKS(ph)QLDSLK ddPTM_A549_PD325901_60min_R1 4 RKSQLDSLK 9 2 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 RKS(0.979)QLDS(0.021)LK;RKS(1)QLDSLK;RKS(0.997)QLDS(0.003)LK;RKS(0.999)QLDS(0.001)LK 90.861 0.00034465 82728000.0 19783.4 20393.8 22634.800000000003 20609.800000000003 26183.1 22169.9 22997.4 22689.800000000003 25384.6 26419.2 26235.5 True False 21791.796204230668 22112.457098047325 24170.93364210959 21882.82053774814 24344.089382791342 21989.35568480691 23872.57864166015 22237.23413919625 24317.773539324393 24751.08720327113 23008.699820537036 0.9471111524858876 0.9610476589516047 1.0505127986647542 0.951067235803391 1.0580384625237436 0.9556974473272808 1.037545746950553 0.9664706964166575 1.056894728037562 1.0757273290678893 1.0 14.489891841361759 -2.6360702495249777 0.4677795786919613 1.021065148370707 2.1910704213986385e-10 0.21950706013647392 0.04275965810231286 45.23500704952367 0.8529493857205651 0.007445548508307866 42.16456982641381 0.002311690831204388 2.6360702495249777 -1.0210651481516 RKS(ph)QLDSLKR ddPTM_A549_MK2206_60min_R1 1 RKSQLDSLKR 10 3 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 RKS(1)QLDSLKR 74.76899999999999 0.00046885 23124000.0 7478.3 7147.7 7244.2 5519.5 9703.9 7342.9 6757.0 6702.2 10403.0 10675.0 11052.0 True False 8740.454213118934 7511.4873997048835 8271.53649021902 6871.777747779771 8276.469164678596 8119.920804177467 7984.659435975311 7652.25737462667 8046.73711017735 8263.510085890517 8307.483380317408 1.0521181702063163 0.9041832593371844 0.9956729507056787 0.8271792350570092 0.996266713489636 0.9774224554472989 0.9611405849926885 0.9211282194986825 0.9686130855515361 0.9947067851461401 1.0 13.020195786373238 -9.78993324788151 0.8061600743527844 0.996794216730826 0.9521784467061357 0.07354070794400236 0.05536210115134877 0.9635255696342006 1.3070828432615673 0.019996928938180364 0.01078587599758651 1.6220593926748505e-10 9.78993324788151 -0.044615770024690304 RKS(ph)QMEEVQDELIHR ddPTM_A549_MK2206_60min_R1 4 RKSQMEEVQDELIHR 15 2 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR 222.6 1.1592e-54 69404500.0 2491.23 2712.7599999999998 2738.62 1813.307 3711.61 2527.2999999999997 2337.6000000000004 2774.22 3476.39 3086.18 3471.0299999999997 True False 2911.688719274203 2850.8278968652044 3126.997496320316 2257.5672964024443 3165.6370857400366 2794.737208514033 2762.3116616154925 3167.4741806924294 2688.993215654084 2389.009794554902 2609.07745544545 1.1159840092892481 1.0926574413937742 1.1985069626023965 0.8652741572277347 1.213316637700035 1.0711591573033177 1.0587311832579844 1.2140207543787325 1.0306298918193633 0.9156530748325462 1.0 11.349324058609843 -8.975262080639414 24.826936617845217 1.0135131039769671 1.101038982215818 0.22256925297327523 0.096855919141213 199.70210952718867 200422.96945637246 0.014892009037775879 0.015436115446062711 1.0586146976087575e-09 8.975262080639414 0.08752587823885083 RKS(ph)QMEEVQDELIHR ddPTM_A549_PD325901_60min_R1 4 RKSQMEEVQDELIHR 15 2 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR 156.11 4.8570999999999996e-20 35201900.0 4716.5 5241.41 3772.74 5077.46 5283.09 4682.6 4530.54 4256.7 5468.77 4867.17 5275.3 True False 5195.315607896216 5683.122015429994 4028.7808237286204 5391.083172451681 4912.023984071068 4644.466458111082 4702.952178906612 4171.796779183448 5238.936615059956 4559.856055563574 4626.471542881937 1.12295419084323 1.2283922991321037 0.8708106785887628 1.1652688495936256 1.0617214303692126 1.0038895549367057 1.0165310940131782 0.9017232118507181 1.1323827600583274 0.9856012326670733 1.0 12.175696601632191 -5.709742973315873 24.99994648524581 1.043196908422326 1.175673415093914 0.2899051551173939 0.08838393405625297 105.93126623358094 51225.77771550067 0.011836812573336472 0.045843671470922796 1.9509989096618544e-06 5.709742973315873 0.13247650667158806 RKS(ph)QVAELNDDDKDDEIVFK ddPTM_A549_MK2206_60min_R1 2 RKSQVAELNDDDKDDEIVFK 20 3 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 RKS(1)QVAELNDDDKDDEIVFK;RKS(1)QVAELNDDDKDDEIVFK 160.47 1.8839e-27 36297000.0 6697.1 7581.200000000001 7075.4 5642.4 9036.1 7639.3 6638.8 7650.6 9610.2 10012.9 8097.8 True False 7827.406751625206 7967.050698076677 8078.798111992448 7024.788253296959 7706.901660049285 8447.685655443067 7844.984025980888 8735.095978979856 7433.505044335907 7750.978935738932 6086.892772089602 1.2859445770946436 1.308886322855598 1.327245018843832 1.1540844428060102 1.2661471047079973 1.3878486071215965 1.2888323024109627 1.4350665119374426 1.2212314760038099 1.2733884472681547 1.0 12.571490235899672 -9.948756551747863 0.8135533600424142 1.0190139474699154 1.3014233878632362 0.12220787909758313 0.10388214365653901 0.23225214291811136 0.31356485932222977 0.03227104237035027 0.015504615523397316 1.1252355596109624e-10 9.948756551747863 0.28240944039332083 RKS(ph)QVAELNDDDKDDEIVFK ddPTM_A549_PD325901_60min_R1 1 RKSQVAELNDDDKDDEIVFK 20 3 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 RKS(1)QVAELNDDDKDDEIVFK 158.8 2.3355e-27 35145000.0 8981.3 9178.1 7452.6 9376.8 10287.0 9173.4 8152.4 9265.7 10642.0 9761.0 9420.2 True False 9893.074964316394 9951.57069754475 7958.378252124427 9955.983639742097 9564.476608223415 9098.694871831072 8462.64404316445 9080.888344698971 10194.753748551877 9144.688794177324 8261.57511956787 1.1974804829752443 1.2045609406823716 0.9633003557971277 1.2050950933268105 1.1577061843291325 1.1013268947080626 1.0243378436540922 1.0991715518255745 1.2339963749049738 1.1068941045537146 1.0 13.01220115111922 -11.105314454133907 1.457708625056601 1.000274080910683 1.1411049855803148 0.05914555096874985 0.08466678872947216 0.43983624402673366 1.6764815311640446 0.059483769465497716 0.0130501785704012 7.846672847209758e-12 11.105314454133907 0.14083090466963188 RKS(ph)QVNGEAGSYEMTNQHVK ddPTM_A549_MK2206_60min_R1 8 RKSQVNGEAGSYEMTNQHVK 20 2 Q05D32;H0YMH7;Q05D32-2 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 RKS(0.991)QVNGEAGS(0.008)Y(0.001)EMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(0.996)QVNGEAGS(0.002)Y(0.002)EMTNQHVK;RKS(0.999)QVNGEAGS(0.001)YEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK 172.8 3.9173e-35 130284600.0 9633.96 10065.48 10389.2 8872.880000000001 14105.2 10519.83 10264.380000000001 10549.43 17087.399999999998 16276.300000000001 16721.8 True False 11259.93692029194 10577.76993885886 11862.544781229597 11046.735998318723 12030.343765045453 11633.031428102004 12129.284981713232 12044.844008774402 13217.131182970732 12599.472525618716 12569.315561798001 0.895827371421427 0.8415549666847368 0.9437701458688413 0.8788653561927537 0.9571200361624583 0.925510332754979 0.9649916832844776 0.9582736585421064 1.0515394508147795 1.0023992526619645 1.0 13.61761847222881 -7.756163206521087 0.7721517147162037 1.0237605509120016 0.888956112512106 0.6798828915938633 0.03246218841986472 0.23319406551413088 0.280530906978445 0.006923403185698252 0.012807573395715493 1.7532215228106472e-08 7.756163206521087 -0.13480443839989553 RKS(ph)QVNGEAGSYEMTNQHVK ddPTM_A549_PD325901_60min_R1 9 RKSQVNGEAGSYEMTNQHVK 20 2 Q05D32;H0YMH7;Q05D32-2 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 RKS(0.958)QVNGEAGS(0.033)Y(0.009)EMTNQHVK;RKS(0.998)QVNGEAGS(0.002)YEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK 206.94 1.588e-56 200053000.0 13216.5 12383.619999999999 13596.0 14110.81 16976.5 15072.099999999997 13961.1 15136.23 17093.3 16895.65 17816.299999999996 True False 14558.229350526934 13427.23111771816 14518.70631938969 14982.402685725308 15784.12920574559 14949.357814738823 14492.397300307062 14834.32601850727 16374.92804455194 15828.855775570337 15625.008046830962 0.9317261985973575 0.8593423489750744 0.9291967259072452 0.958873278069384 1.0101837489259342 0.9567584074154014 0.927512949553097 0.9493963762480073 1.0479948551369274 1.013046247920539 1.0 13.931569312307863 -6.626054705132136 0.3842215805050116 1.0215466313769634 0.8685281776004857 0.44887974113067264 0.03724186357379437 1.46212250615751 0.28818765603877344 0.01340315383125167 0.08871751861241436 2.3656216973871438e-07 6.626054705132136 -0.15301845377647771 RKS(ph)RDFHSK ddPTM_A549_PD325901_60min_R1 1 RKSRDFHSK 9 3 P28347;H0YEJ9;H0YE88;P28347-2 P28347 TEAD1 Transcriptional enhancer factor TEF-1 1 RKS(1)RDFHSK 48.004 0.005806 3270500.0 677.23 888.9 532.97 585.89 859.69 836.58 649.79 495.2 947.15 942.77 747.29 True False 745.9818910496243 963.8107225948214 569.1405492089681 622.079094647267 799.308340169495 829.7671698472153 674.5181140287314 485.3228475231151 907.3445793028486 883.2433413058648 655.3780674616119 1.1382466519499745 1.470617908114961 0.8684156175890109 0.9491912005183247 1.2196141126073214 1.2660893170579257 1.0292045881871696 0.7405234804436638 1.384459786420905 1.3476852295756752 1.0 9.356183582988297 RKS(ph)SENNGTLVSK ddPTM_A549_PD325901_60min_R1 2 RKSSENNGTLVSK 13 2 F8WE62;Q9Y4C1 F8WE62 KDM3A Lysine-specific demethylase 3A 1 RKS(0.975)S(0.025)ENNGTLVSK;RKS(0.867)S(0.133)ENNGTLVSK 73.464 0.00040113 12935700.0 4396.6 3858.2 3777.7 3860.6000000000004 5370.8 4769.1 4363.0 4320.2 4343.9 5292.6 5326.6 True False 4842.939595394146 4183.344054354079 4034.0774391555215 4099.060493941254 4993.573536254143 4730.262030790068 4529.036352525206 4234.030221868666 4161.340989319163 4958.424332759236 4671.461968099426 1.0367074865354164 0.8955106737294201 0.8635578041100433 0.8774684503337503 1.0689530537451357 1.0125870793965952 0.969511554081609 0.9063608460867492 0.89080057115657 1.0614288132108158 1.0 12.18965840719913 -7.4688765600607026 0.0038829524139935997 1.8860445136428252 2.3431740408806958e-05 0.011053850542259935 0.07368266798100792 58428.35679276531 87.38312213077701 21003.803131142922 21438.071144591857 3.397218183290659e-08 7.4688765600607026 -1.8860210819024164 RKS(ph)STSGSDFDTK ddPTM_A549_MK2206_60min_R1 3 RKSSTSGSDFDTK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RKS(0.409)S(0.409)T(0.126)S(0.042)GS(0.014)DFDTK;RKS(0.493)S(0.493)T(0.011)S(0.002)GS(0.003)DFDTK;RKS(0.419)S(0.419)T(0.114)S(0.032)GS(0.015)DFDTK 74.786 0.00036773 35197600.0 5164.9 5746.900000000001 5346.3 4895.8 6544.799999999999 5972.1 5773.0 5378.9 8729.8 8156.4 8524.0 True False 6036.608850318653 6039.39266300544 6104.485731710603 6095.271219780813 5582.068589844132 6604.063658040864 6821.879373077614 6141.375547190388 6752.514238625995 6313.863575134178 6407.255549568 0.9421520343020597 0.9425865124753199 0.952745787097908 0.951307649995602 0.8712105435252219 1.0307164443419357 1.0647116101897278 0.9585032935988422 1.053885581180116 0.9854240284765732 1.0 12.645490817343449 -7.2878524972459475 24.826230964105836 1.0240614506026524 0.9348137494664771 0.5751370789974075 0.0353027455485 339.5082878040717 319109.9257224042 0.005135996764022536 0.008211944112807366 5.1540366534416864e-08 7.2878524972459475 -0.0892477011361753 RKS(ph)STSGSDFDTK ddPTM_A549_PD325901_60min_R1 3 RKSSTSGSDFDTK 13 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RKS(0.424)S(0.424)T(0.103)S(0.025)GS(0.025)DFDTK;RKS(0.495)S(0.495)T(0.009)S(0.001)GSDFDTK;RKS(0.736)S(0.176)T(0.043)S(0.044)GS(0.002)DFDTK 96.773 3.3974000000000004e-05 57950000.0 10894.5 9912.2 10351.3 10609.3 12055.2 10812.5 11203.0 13030.0 13331.400000000001 11949.6 14054.8 True False 12000.501619892995 10747.535880868929 11053.801465423556 11264.612365531497 11208.484340182265 10724.446584872956 11629.336295516821 12770.106428162739 12771.127619192306 11195.1002166685 12326.14870071787 0.9735807924493148 0.871929760205067 0.8967765791094008 0.9138793177852422 0.9093257441823243 0.8700565639167057 0.9434687652956462 1.0360175540815124 1.0361004016159987 0.9082399124404934 1.0 13.589434480319495 -8.095697114087926 4.020265278608408 1.01875523168602 0.9044671531796412 0.44856247095748514 0.04317593878042544 0.0755131886107649 2.1929610341751635 0.004424508317441499 0.005820164016956925 8.022373651840688e-09 8.095697114087926 -0.11428807850637879 RKS(ph)STVMK ddPTM_A549_MK2206_60min_R1 2 RKSSTVMK 8 2 Q15139;F8WBA3 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 RKS(0.489)S(0.489)T(0.022)VMK;RKS(0.488)S(0.488)T(0.024)VMK 42.743 0.015643 8697100.0 2014.9499999999998 2111.05 1910.23 1483.2800000000002 2774.4 2164.5 1787.8400000000001 1496.1599999999999 3009.0 2912.0 2387.8 True False 2355.024299202225 2218.493427976413 2181.1293379132376 1846.6836665869698 2366.289435225456 2393.5459533211833 2112.6673858241975 1708.2452617978327 2327.4663043856262 2254.1771775281663 1794.8433600725562 1.3121057533995744 1.2360373486222946 1.2152198829345564 1.028882914056811 1.3183821429017624 1.3335681578499556 1.1770761910603682 0.9517517237430554 1.2967517701887583 1.2559186097649444 1.0 10.809642227035045 -10.979711863981851 1.1022016513633266 0.9931656705165712 1.211335788101836 0.0 0.13740590875742612 0.5508390707126045 1.1255909815586715 0.09737444069423684 0.019625355923073805 1.0478235040606102e-11 10.979711863981851 0.21817011758526483 RKS(ph)STVMK ddPTM_A549_PD325901_60min_R1 1 RKSSTVMK 8 2 Q15139;F8WBA3 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 RKS(0.499)S(0.499)T(0.003)VMK 58.223 0.0030928 5497900.0 1454.3 1600.9 1597.2 1266.5 1977.9 1570.5 1575.8 1221.1 1768.4 2162.3 1537.4 True False 1601.939465400925 1735.8134613590378 1705.595596743838 1344.7288285698069 1838.979127384573 1557.7103686976159 1635.7679313108474 1196.7442025655812 1694.0802977766537 2025.7720089795728 1348.3095463815687 1.1881095626000853 1.2873998155819675 1.2649881485457926 0.9973442909891342 1.36391463838538 1.155306192764126 1.2131991023135045 0.8875886147786016 1.2564476030916067 1.5024532121841727 1.0 10.396936034714804 -8.101719217165197 21.67941700288476 1.1042764766089512 1.210807047217356 0.0 0.170811735837235 20.851930375665063 4433.531212536551 0.021334432227135887 0.02754266186877329 7.911899878688608e-09 8.101719217165197 0.10653057060840476 RKS(ph)TDSVPISK ddPTM_A549_MK2206_60min_R1 5 RKSTDSVPISK 11 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 RKS(0.791)T(0.205)DS(0.004)VPISK;RKS(0.795)T(0.204)DS(0.001)VPISK;RKS(0.555)T(0.432)DS(0.013)VPISK;RKS(0.509)T(0.455)DS(0.036)VPISK;RKS(0.491)T(0.491)DS(0.018)VPISK 100.4 5.505e-05 68393100.0 13695.500000000002 11634.7 11347.000000000002 9973.9 13445.4 9890.500000000002 9839.699999999999 8833.699999999999 15308.4 14063.199999999999 15416.6 True False 16006.96557717266 12226.85653417833 12956.175223560267 12417.505947745385 11467.599471013675 10937.106145217445 11627.446122860187 10085.904027071654 11841.07184249149 10886.31335268342 11588.232743485452 1.3813120543485184 1.0551096793470853 1.118045823755467 1.0715616628192184 0.9895900198811942 0.9438113979343355 1.0033838964268973 0.8703573918759647 1.021818607254689 0.9394282625884754 1.0 13.50037294532324 -2.000000001071184 0.781888704259316 0.9963896029550556 82.33866067546359 0.7899852670992683 0.05822693066597222 139.58228192121376 0.49313518822462626 0.008603937719151782 20090.374300851123 0.009999999975335076 2.000000001071184 81.34227107250852 RKS(ph)TDSVPISK ddPTM_A549_PD325901_60min_R1 2 RKSTDSVPISK 11 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 RKS(0.764)T(0.235)DSVPISK;RKS(0.949)T(0.05)DSVPISK 120.21 2.5626e-06 48417000.0 5220.1 4638.3 4174.7 4945.2 5826.200000000001 5486.3 5753.1 6725.0 9132.2 10139.8 10548.4 True False 5750.040709165486 5029.185819115263 4458.020246510455 5250.65377263593 5416.987811298854 5441.621391776969 5972.037368717116 6590.8645993395585 8748.405392080947 9499.5712975309 9251.013671816921 0.6215579084790352 0.5436361892358461 0.48189532570811655 0.5675760472208543 0.5855561350862153 0.5882189330618751 0.6455549176098226 0.7124478282221689 0.9456699235817624 1.026868150294838 1.0 13.175395741013066 -8.557190879231904 1.302851307218027 0.984963072537053 0.559362619197363 0.9528051527775843 0.04046187291826283 0.05302467743390383 0.17481472202203022 0.007706840339230242 0.008920007000097822 2.7721014548244515e-09 8.557190879231904 -0.42560045333969 RKS(ph)VEEESK ddPTM_A549_MK2206_60min_R1 2 RKSVEEESK 9 2 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 RKS(1)VEEESK;RKS(1)VEEESK 65.563 0.0018926 17497000.0 6361.4 6125.700000000001 4952.9 3410.3 2711.0 1839.3700000000001 1814.6599999999999 2095.54 2432.7 7764.3 8109.8 True False 7435.048798702215 6437.471965019825 5655.295696199135 4245.823653094186 2312.2154912399847 2034.0109125250115 2144.3602326604946 2392.5892123220983 1881.697334223632 6010.339237459456 6095.912840906449 1.219677674655965 1.0560308411598922 0.9277192512086845 0.6965033398448067 0.3793058646973967 0.3336679781370625 0.35177015955195856 0.3924907187430071 0.30868179767869314 0.9859621346826428 1.0 12.573626560050577 -6.077069797079905 1.879276303275989 0.576882579443867 1.157105861516851 0.49787682768916586 0.23659144352951375 0.3068704199322674 2.0473540799770804 0.043388318251797967 0.1766441058229053 8.373946904995744e-07 6.077069797079905 0.580223282072984 RKS(ph)VEEESK ddPTM_A549_PD325901_60min_R1 4 RKSVEEESK 9 2 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 RKS(1)VEEESK;RKS(1)VEEESK;RKS(1)VEEESK;RKS(1)VEEESK 91.20200000000001 0.00021365 48957600.0 7752.1 7570.799999999999 7758.4 6802.9 7131.6 6799.1 6551.700000000001 6431.700000000001 8006.2 10549.3 11184.6 True False 8539.0874852056 8208.817885724913 8284.93167904921 7223.099682493122 6630.701018684374 6743.730383834424 6801.028528727804 6303.414697928961 7669.727256310473 9883.215397645194 9808.965105021 0.8705390827452963 0.8368689049085305 0.8446285199657129 0.7363773451284653 0.6759837503438828 0.6875068176542348 0.6933482233764399 0.6426177104761416 0.7819099338404726 1.007569635718878 1.0 13.259885217578287 -10.243546842973455 0.8574365219055544 0.9882674668737297 0.7496255494875986 0.6323302149664741 0.07311097180773483 0.31135475640447274 0.4447677360543598 0.04098847971430604 0.015924322890121332 5.707595107694652e-11 10.243546842973455 -0.23864191738613105 RKS(ph)VEEESKK ddPTM_A549_MK2206_60min_R1 1 RKSVEEESKK 10 3 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 RKS(1)VEEESKK 59.227 0.0016803 3654600.0 1667.9 1941.1 1068.0 1024.5 558.42 400.97 409.78 678.87 726.42 2319.3 2165.6 True False 1949.4007437600883 2039.8936988915527 1219.4584593956436 1275.502545991552 476.27715773450103 443.40037925765523 484.2317217217644 775.1019014521812 561.8870298543719 1795.368519176193 1627.8217524805805 1.1975517225946053 1.2531431625010725 0.7491351295296022 0.7835640137182456 0.29258557149068626 0.2723887787971705 0.29747220233656463 0.4761589530739656 0.34517724621761076 1.1029269736937068 1.0 10.668727016888347 -5.892049546655953 2.0969004626995376 0.5868314518574858 1.256169678361121 0.4503686175731382 0.27392423173574126 0.26736328990414815 2.2517946323394757 0.04429897797286811 0.2097124381663571 1.2821842958143441e-06 5.892049546655953 0.6693382265036352 RKS(ph)VEEESKK ddPTM_A549_PD325901_60min_R1 2 RKSVEEESKK 10 3 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 RKS(1)VEEESKK;RKS(1)VEEESKK 49.483000000000004 0.0085659 40054000.0 9574.9 9037.4 9348.5 8167.4 10314.7 7527.8 7433.1 8468.3 9929.099999999999 14237.0 14985.5 True False 10546.936799331163 9799.01341475806 9982.94542709728 8671.881748488784 9590.231055783237 7466.4960926341355 7715.970688048389 8299.393113247166 9511.81445637535 13338.073390298381 13142.378500911269 0.802513547954798 0.7456042613655217 0.7595995980792275 0.6598411199226603 0.7297180685458319 0.5681236537295302 0.5871061077348653 0.6314985611372934 0.7237513708584651 1.0148903708239374 1.0 13.681938777046796 -10.283445036121396 0.7889881870431392 0.9923997206554932 0.6856357918494995 0.7417266373656659 0.07160165684438116 0.2660605397096256 0.31431601152043537 0.04476763032108965 0.01558433552827848 5.2066089895859414e-11 10.283445036121396 -0.3067639288059937 RKS(ph)VEPPK ddPTM_A549_PD325901_60min_R1 1 RKSVEPPK 8 2 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 RKS(1)VEPPK 58.37 0.0030299 4508600.0 1498.5 1083.0 978.47 1065.2 1170.2 1264.7 1267.5 1304.6 1227.6 1181.6 1206.5 True False 1650.6266168626057 1174.26821078883 1044.8748582180963 1130.994984755277 1088.0091889708413 1254.400702509949 1315.7354061026135 1278.5787295610985 1176.0082410939938 1106.993574346883 1058.108148633642 1.5599791183860512 1.1097808974490821 0.9874934424872975 1.0688841081280354 1.0282589642427489 1.1855127513475667 1.2434791356645831 1.20836299315165 1.1114253704714387 1.0462007837066256 1.0 10.047271376692025 -2.001510802319566 0.018929137107504275 3.524727625524518e-07 2.5885898570770807 0.17022197506441095 0.14132155748320205 3659.7226399372457 5.196397643414067 265.9117255988191 472.67716507304283 0.009965272929440435 2.001510802319566 2.588589504604318 RKS(ph)VLASTTK ddPTM_A549_PD325901_60min_R1 2 RKSVLASTTK 10 2 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RKS(1)VLASTTK;RKS(1)VLASTTK 51.875 0.0079785 5224900.0 2593.8 2959.4 2367.4 2695.6 3268.3 3024.7 2642.9 3363.7 3299.2 3401.8 3070.1 True False 2857.12066654536 3208.799024015204 2528.0660003326852 2862.101089848221 3038.745883022903 3000.0678460360878 2743.477005750373 3296.608364728398 3160.5460972770493 3187.0097674451813 2692.4971629673805 1.0611415699307736 1.1917557678979358 0.9389298659637297 1.0629913112680576 1.1285976174154717 1.1142325003342755 1.0189340376971123 1.2243683707711808 1.1738345134573274 1.1836631849716797 1.0 11.394729109292276 -6.644111184794415 15.892176315335524 1.0951356616690857 1.0638906402686281 0.044775533613261365 0.08477105325361539 3.5368701686039428 471.5519383598861 0.01316677469732994 0.027409170637306093 2.2692838126013153e-07 6.644111184794415 -0.031245021400457595 RKS(ph)YTSDLQK ddPTM_A549_MK2206_60min_R1 3 RKSYTSDLQK 10 2 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10;E9PK58 E9PMS6 LMO7 LIM domain only protein 7 1 RKS(0.591)Y(0.056)T(0.271)S(0.082)DLQK;RKS(0.909)YT(0.09)SDLQK;RKS(0.998)Y(0.001)T(0.001)SDLQK 95.428 0.00012646 39417500.0 9381.7 9909.8 9570.2 8221.5 14043.1 10459.5 9752.2 9597.2 14217.1 12892.6 12840.400000000001 True False 10965.101599456815 10414.166491821914 10927.398266018892 10235.767869077159 11977.378592782086 11566.317347545817 11524.048505478535 10957.632490192342 10996.94955004349 9980.152705700426 9651.774302988382 1.1360710741093274 1.0789898483844031 1.132164711169795 1.060506342953747 1.2409509605994051 1.1983617710543288 1.1939823853848779 1.1352972154352634 1.1393707731684748 1.0340225944374157 1.0 13.236578464641111 -10.44678785260786 0.7477532148053465 0.9979751921857647 1.1472883336293627 0.49678211555334273 0.04979070223482507 0.43733217194445784 0.43445330356678274 0.0371143900561932 0.010346168401875104 3.574474040729807e-11 10.44678785260786 0.14931314144359797 RKS(ph)YTSDLQK ddPTM_A549_PD325901_60min_R1 5 RKSYTSDLQK 10 2 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10;E9PK58 E9PMS6 LMO7 LIM domain only protein 7 1 RKS(0.937)YT(0.061)S(0.002)DLQK;RKS(0.976)YT(0.023)S(0.001)DLQK;RKS(0.998)YT(0.001)SDLQK;RKS(0.999)YTSDLQK;RKS(0.944)Y(0.025)T(0.024)S(0.007)DLQK 123.02 1.0514000000000001e-05 100401500.0 13923.099999999999 14408.300000000001 14332.3 14097.1 16583.7 16551.5 14975.2 15891.199999999999 16909.9 16831.0 17134.3 True False 15336.562862355517 15622.538006933242 15304.976065121284 14967.845850162985 15418.918122659159 16416.71007163233 15545.089430743863 15574.237549594769 16199.235708761269 15768.287787603569 15026.889723276758 1.0206079331639117 1.0396388271043089 1.0185059148609954 0.9960707854918032 1.0260884591955943 1.0924888898467613 1.0344848279989978 1.036424558667664 1.0780165428158124 1.0493380917794572 1.0 13.875258809618606 -7.013914808818186 24.81279292388195 1.0416795860180654 1.0190483950758658 0.224427499494938 0.024738345499769547 1120.4858609160779 1998045.3122826663 0.004782917662796149 0.008504947934235188 9.684678122228336e-08 7.013914808818186 -0.022631190942199675 RKSLS(ph)DSESDDSK ddPTM_A549_PD325901_60min_R1 2 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.283)LS(0.717)DSESDDSK;RKS(0.405)LS(0.595)DSESDDSK 256.08 1.2455999999999997e-69 848600000.0 20541.1 20151.1 21317.9 20944.5 23208.9 21994.0 22578.8 24512.9 24487.1 25845.9 26256.0 True False 22626.41735044142 21849.303917291585 22764.660888946575 22238.19419658927 21578.78693035838 21814.88815608747 23438.04858959344 24023.970979501966 23457.992343184047 24213.985463111112 23026.678450497246 0.982617505997823 0.948869111290333 0.9886211308281411 0.9657577945684584 0.9371211300296071 0.9473745074863974 1.0178649360992535 1.0433103077002053 1.0187310511854344 1.0515622353074647 1.0 14.491018699989988 -7.767593649095636 24.999108277373537 1.012818070273314 0.9614296673073076 0.6850776861186483 0.02090862990197081 70.51660533435627 286443.6454727325 0.002933911657503466 0.00410962821237864 1.7076794448777473e-08 7.767593649095636 -0.05138840296600644 RKSLSDSES(ph)DDSK ddPTM_A549_MK2206_60min_R1 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.251)LS(0.028)DS(0.308)ES(0.381)DDS(0.032)K 54.7 0.006343100000000001 704400000.0 1356.2 1672.3 1169.7 1198.1 1314.2 1414.2 893.81 1211.3 1966.9 2372.0 2609.2 True False 1585.0934040934287 1757.4129270291805 1335.5810486470818 1491.6345537847526 1120.8829209102125 1563.849705330016 1056.2037073359618 1383.005484450671 1521.4002904938802 1836.1635525744541 1961.2636297434099 0.8082000706354836 0.8960615494914883 0.6809798684850005 0.7605477056543906 0.5715105832339615 0.7973684320728534 0.5385322459042101 0.7051604197807962 0.7757245213856964 0.9362145530709084 1.0 10.937567757856684 -10.101721730178474 0.7829950161178166 0.9874218768230327 0.7207330514071988 0.46702941283120103 0.09938346920203818 0.3622001759722555 0.4395566624993562 0.049749526321360385 0.020413675790533867 7.911854097190703e-11 10.101721730178474 -0.26668882541583394 RKT(ph)FVSDLLPPTDK ddPTM_A549_MK2206_60min_R1 3 RKTFVSDLLPPTDK 14 2 Q7Z4Q2;Q7Z4Q2-3;Q7Z4Q2-2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 1 RKT(0.851)FVS(0.148)DLLPPTDK;RKT(1)FVSDLLPPTDK;RKT(0.866)FVS(0.134)DLLPPTDK 116.82 6.5495000000000006e-06 13341500.0 2299.33 2616.91 2535.02 2799.0200000000004 4163.49 3431.74 3366.3199999999997 3672.7 4938.37 4452.87 4238.16 True False 2687.400690778754 2750.099541273655 2894.523954810061 3484.7800256527844 3551.0461363418526 3794.884448995353 3977.9367696481286 4193.316472172029 3819.8370799564104 3446.9635743474723 3185.7079047345264 0.843580381862631 0.8632616748028028 0.9085967833109512 1.093879329135538 1.114680392092561 1.1912217197802355 1.2486822045851127 1.3162903183747692 1.1990543998963168 1.0820086704197436 1.0 11.637398277919061 -6.2340367057303565 2.2767084451265838 1.1337628480342052 0.8522806136765688 0.7003015399022432 0.08267050920867086 0.189304413515994 1.893556095784944 0.01598231969055846 0.05032998844595364 5.833957947048162e-07 6.2340367057303565 -0.2814822343576364 RKT(ph)FVSDLLPPTDK ddPTM_A549_PD325901_60min_R1 4 RKTFVSDLLPPTDK 14 2 Q7Z4Q2;Q7Z4Q2-3;Q7Z4Q2-2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 1 RKT(0.971)FVS(0.029)DLLPPTDK;RKT(0.994)FVS(0.006)DLLPPTDK;RKT(0.998)FVS(0.002)DLLPPTDK;RKT(0.935)FVS(0.065)DLLPPTDK 121.74 2.5441e-06 30823500.0 7323.5 8456.7 8334.31 8594.5 11029.9 8642.4 8592.7 9720.3 9278.900000000001 10037.5 10557.5 True False 8066.976328724251 9169.37578779123 8899.926394877375 9125.362745474302 10255.197875089289 8572.019159778585 8919.699900605865 9526.420991072162 8888.940101243947 9403.730536989535 9258.99442950657 0.8712583628969908 0.9903209098571499 0.9612195430764148 0.9855673653278794 1.1075930494577269 0.9258045487597732 0.9633551427766884 1.02888289474647 0.9600329894266558 1.015631946707055 1.0 13.176639803164939 -5.260264256204436 23.946533962494417 0.9865819811962462 0.8712583029240427 0.3629345540853729 0.04577959418200522 45.36575654761811 924236.6612986332 0.00581970433543534 0.04959929955592251 5.492065951148308e-06 5.260264256204436 -0.11532367827220347 RKT(ph)GTLQPWNSDSTLNSR ddPTM_A549_MK2206_60min_R1 4 RKTGTLQPWNSDSTLNSR 18 2 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 RKT(0.78)GT(0.22)LQPWNSDSTLNSR;RKT(0.991)GT(0.009)LQPWNSDSTLNSR;RKT(0.949)GT(0.051)LQPWNSDSTLNSR;RKT(0.992)GT(0.008)LQPWNSDSTLNSR 170.27 1.0206999999999998e-30 89569200.0 7470.499999999999 7463.3 6470.5 6201.2 11401.5 8461.5 7897.0 7703.7 12079.4 10579.7 11774.099999999999 True False 8731.33776381062 7843.150091668292 7388.114196179317 7720.494278382448 9724.354453475717 9356.89031371088 9331.782679576296 8795.723066591783 9343.435186838053 8189.738422079244 8850.266021371253 0.9865621827328748 0.8862050104176508 0.8347900705288188 0.8723460130734286 1.098764085734118 1.0572439620590217 1.0544070265280496 0.9938371395110879 1.0557236544388513 0.9253663564804724 1.0 13.111505105049256 -6.7493230414726595 24.99996869228885 1.0331013572222758 0.8900503174261527 0.5707503259897966 0.054606737190172824 98.1456517938956 202505.31014218915 0.006525786969880663 0.013504208042938018 1.7810534727534887e-07 6.7493230414726595 -0.1430510397961231 RKT(ph)GTLQPWNSDSTLNSR ddPTM_A549_PD325901_60min_R1 8 RKTGTLQPWNSDSTLNSR 18 2 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 RKT(0.798)GT(0.202)LQPWNSDSTLNSR;RKT(0.937)GT(0.063)LQPWNSDSTLNSR;RKT(0.802)GT(0.198)LQPWNSDSTLNSR;RKT(0.904)GT(0.096)LQPWNSDSTLNSR;RKT(0.921)GT(0.079)LQPWNSDSTLNSR;RKT(0.956)GT(0.044)LQPWNSDSTLNSR;RKT(0.802)GT(0.198)LQPWNSDSTLNSR;RKT(0.982)GT(0.018)LQPWNSDSTLNSR 129.43 6.2317e-13 94551900.0 9993.9 9405.61 10310.350000000002 10779.6 12199.7 11824.3 10717.599999999999 11329.3 12658.900000000001 11707.04 13559.900000000001 True False 11008.473370879668 10198.253763691167 11010.072352171195 11445.431409752136 11342.835158680205 11728.006821134175 11125.464132895755 11103.328223836083 12126.890455510562 10967.855496464055 11892.118263288296 0.9256949121388665 0.8575641057299108 0.9258293693697925 0.9624384114211924 0.9538111636255955 0.9861999823310921 0.9355325844043068 0.9336711911209917 1.019741831272148 0.9222793831711633 1.0 13.53771809511679 -6.454231145233074 0.3287297728273194 1.012329168870825 0.8537948674329705 0.11575585457581605 0.03983474104695445 1.6743458427239037 0.22080250973068902 0.012695904863221707 0.09593796908592683 3.513733787482998e-07 6.454231145233074 -0.1585343014378544 RKT(ph)ISGIPR ddPTM_A549_PD325901_60min_R1 4 RKTISGIPR 9 2 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 RKT(0.997)IS(0.003)GIPR;RKT(1)ISGIPR;RKT(0.995)IS(0.005)GIPR;RKT(1)ISGIPR 84.479 0.00046632 63638800.0 7544.04 8623.150000000001 8835.87 8538.96 8653.99 9329.49 9029.849999999999 9353.29 9320.07 9291.910000000002 9053.210000000001 True False 8309.905387171279 9349.853113447562 9435.525272602663 9066.392165814796 8046.163597044759 9253.513726622548 9373.485883073516 9166.731293435945 8928.379869316479 8705.21721683272 7939.722563026585 1.0466241510589485 1.1776045118991465 1.1883948334091268 1.1419028931860724 1.0134061402238215 1.165470663888683 1.1805810352522428 1.1545405044910826 1.124520384489735 1.0964132748631372 1.0 12.954872880954918 -10.406650857979095 0.7378337041424153 0.9983593605922322 1.1357013203725768 0.16720575506462954 0.05967992930116129 0.48670345100496365 0.47558140862059994 0.03735708614849569 0.01075398605082528 3.920569364723626e-11 10.406650857979095 0.13734195978034458 RKT(ph)ITGVPDNIQK ddPTM_A549_MK2206_60min_R1 2 RKTITGVPDNIQK 13 2 Q5SYE7-2 Q5SYE7-2 NHSL1 NHS-like protein 1 1 RKT(0.996)IT(0.004)GVPDNIQK;RKT(0.986)IT(0.014)GVPDNIQK 81.317 0.0011542 13379200.0 6556.3 7546.4 6986.3 7036.6 8303.5 7340.5 6289.6 6581.7 9635.3 9729.5 9100.599999999999 True False 7662.843153854708 7930.479526719495 7977.062392205785 8760.567315884977 7082.066149579941 8117.266837770455 7432.338906098907 7514.6761306108965 7452.9199344123645 7531.599192568783 6840.669856217567 1.120189004135298 1.1593132972952038 1.166122990858174 1.2806592775300203 1.035288399884255 1.1866187096271827 1.086492852647108 1.0985292798161743 1.0895014802736482 1.1010031694079232 1.0 12.739921889148338 -9.318643543599642 0.3069315164603758 0.9802737815959017 1.1775722978036798 0.2494674049736222 0.06310887071836799 0.9198620181284778 0.23297407767205364 0.06773930504915164 0.03762069915247591 4.801273616661369e-10 9.318643543599642 0.19729851620777805 RKT(ph)SDANETEDHLESLICK ddPTM_A549_MK2206_60min_R1 1 RKTSDANETEDHLESLICK 19 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RKT(0.468)S(0.468)DANET(0.065)EDHLESLICK 97.97399999999999 4.1119e-07 21063000.0 3641.3 3484.4 2722.3 2303.4 3541.8 2205.4 2432.8 2561.0 3881.3 4165.2 5447.6 True False 4255.862418762282 3661.7410769242856 3108.3630749183135 2867.733103403556 3020.8059117940884 2438.773964173961 2874.8082693267347 2924.029592733565 3002.1917471624893 3224.278427142966 4094.8105738886256 1.039330719203627 0.8942394308235175 0.7590981362457666 0.7003335201120723 0.7377156665211471 0.5955767477316993 0.7020613572843935 0.7140817725193985 0.7331698726936386 0.78740600302813 1.0 11.999580998938026 -10.649657921237745 0.915418622743127 1.0002832984957473 0.7569169170018055 0.04834932959156313 0.1259379058813423 0.5005149342342506 0.7456564677670365 0.07988240735401525 0.02129018713111423 2.2404851965331815e-11 10.649657921237745 -0.24336638149394174 RKT(ph)SDANETEDHLESLICK ddPTM_A549_PD325901_60min_R1 1 RKTSDANETEDHLESLICK 19 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RKT(0.497)S(0.497)DANET(0.005)EDHLESLICK 102.21 7.635200000000001e-10 10634000.0 1758.9 1573.3 1535.3 1535.2 1984.5 1928.2 1213.2 1723.9 2134.2 3100.6 3609.1 True False 1937.462233166257 1705.8875124968297 1639.4946905088989 1630.0258173078296 1845.1155661533378 1912.4973784926715 1259.3689898885139 1689.5154621266126 2044.506995880419 2904.8275868482942 3165.2035799698965 0.6121129918552296 0.538950329543433 0.5179744838164538 0.5149829311526725 0.5829374065635571 0.6042257093968221 0.3978793016215694 0.533777818532191 0.6459322265457136 0.917737994873594 1.0 11.62808257874463 -10.084776593160544 0.6252926678036308 1.0034676476165199 0.5327105726661184 0.8621524051332415 0.0633241683673298 0.18738631482223508 0.1412474410346968 0.04286492909985762 0.014888250052062024 8.226657312776573e-11 10.084776593160544 -0.4707570749504014 RKT(ph)SDFNTFLAQEGCTK ddPTM_A549_PD325901_60min_R1 1 RKTSDFNTFLAQEGCTK 17 2 Q9UHD1-2;Q9UHD1;E9PHZ2 Q9UHD1-2 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 RKT(0.81)S(0.158)DFNT(0.032)FLAQEGCTK 88.755 2.4249000000000003e-06 5867500.0 1695.1 1636.6 2123.8 2434.1 2812.7 2812.2 2430.2 2706.3 3470.3 2506.4 2520.6 True False 1867.1853041333347 1774.522025648199 2267.933839446884 2584.4488287578115 2615.1456552882296 2789.298375581937 2522.6825908564656 2652.32072344872 3324.455359293327 2348.1454762551007 2210.582179399882 0.8446577202754023 0.8027396774409614 1.0259441429418252 1.1691258768128787 1.1830121855040814 1.2617935680360735 1.1411847134049145 1.199829053253636 1.5038822760237005 1.0622294426043748 1.0 11.110210652796585 -6.049813027546226 1.5823855696916709 1.2317125699938478 0.8016005511184109 0.5479377277249737 0.12534335895026144 0.3007210659505079 1.3691164732893426 0.025859571892082295 0.1243678795727183 8.916347220815395e-07 6.049813027546226 -0.43011201887543693 RKT(ph)SQSEEEEAPR ddPTM_A549_MK2206_60min_R1 2 RKTSQSEEEEAPR 13 2 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RKT(0.492)S(0.492)QS(0.016)EEEEAPR;RKT(0.492)S(0.492)QS(0.017)EEEEAPR 76.145 0.0018989999999999999 79846000.0 2758.3500000000004 2934.0899999999997 2929.99 2806.55 2617.57 1649.88 1525.3400000000001 1699.3 2484.7 3551.2999999999997 4504.8 True False 3223.89204481722 3083.4226484883407 3345.5066399294387 3494.154875990817 2232.5289204740125 1824.4692064982933 1802.4745336792346 1940.1809788879925 1921.9194172505697 2749.058863515033 3386.133833844901 0.9520864215684416 0.9106027108760683 0.9880018936317911 1.0319009960758874 0.6593150271142744 0.5388059940993642 0.5323104821384315 0.572978232430036 0.567585190532254 0.8118577110088766 1.0 11.725423280225414 -6.7610439762870005 24.99999897793704 0.7263626368807751 0.9675986372490487 0.49089841108258714 0.14022491728136133 11.991920634095779 758109.2966030037 0.029123408402498777 0.057808791235665735 1.7336284431357867e-07 6.7610439762870005 0.24123600036827364 RKTS(ph)QSEEEEAPR ddPTM_A549_MK2206_60min_R1 4 RKTSQSEEEEAPR 13 2 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RKT(0.219)S(0.772)QS(0.009)EEEEAPR;RKT(0.212)S(0.785)QS(0.003)EEEEAPR;RKT(0.241)S(0.759)QSEEEEAPR;RKT(0.141)S(0.851)QS(0.008)EEEEAPR 126.91 7.6282e-08 126977000.0 6541.1 5701.799999999999 5429.05 4830.03 5863.2 4195.42 4101.27 4693.389999999999 6001.280000000001 7182.1 8217.9 True False 7645.077765459023 5991.99726564312 6198.970926013029 6013.3875668282835 5000.731046934077 4639.3765597055935 4846.417671301236 5358.6924054040555 4641.999662074898 5559.658621814916 6177.168627498222 1.2376346229931738 0.9700232625946466 1.0035294970607977 0.9734860628636796 0.8095506774208612 0.7510522764512193 0.7845694303579428 0.8674997767665519 0.7514769212241703 0.9000334873594992 1.0 12.592729999315665 -4.472772617454813 0.7611502253677661 0.8616945299950772 2.1298160343061276 0.6590147398631725 0.08064644856705755 4.585662681120444 0.7991568911001171 0.016934719157576567 6.592337133588553 3.366878020809268e-05 4.472772617454813 1.2681215043110505 RKTS(ph)QSEEEEAPR ddPTM_A549_PD325901_60min_R1 2 RKTSQSEEEEAPR 13 2 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RKT(0.12)S(0.879)QS(0.001)EEEEAPR;RKT(0.089)S(0.864)QS(0.047)EEEEAPR 135.89 6.4903e-09 141341000.0 6957.0 6632.6 7500.2 8123.700000000001 8386.7 8684.7 8341.2 9535.2 10886.8 12999.400000000001 14037.2 True False 7663.269518527291 7191.552479111724 8009.20867436648 8625.482498738684 7797.647124544311 8613.974682603111 8658.628930479777 9345.012955780307 10429.265655866813 12178.615665508514 12310.713389142278 0.6224878507273259 0.5841702468237528 0.6505885094709775 0.7006484698397845 0.6334033518659957 0.6997136892326977 0.7033409565132479 0.7590959727827276 0.8471698857894904 0.9892696938464776 1.0 13.587626746014935 -8.898891025094729 0.3912084190205652 1.011930813383577 0.6040818240162656 0.961629124214058 0.026631686820024623 0.1304452719911564 0.05326075164632794 0.017945594000095082 0.014768601511707578 1.2621441971208066e-09 8.898891025094729 -0.4078489893673113 RKTSDANET(ph)EDHLESLICK ddPTM_A549_MK2206_60min_R1 1 RKTSDANETEDHLESLICK 19 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RKT(0.289)S(0.289)DANET(0.423)EDHLESLICK 117.31 1.8796e-14 16361000.0 2164.7 2326.3 1416.8 1707.1 2320.0 1418.5 1515.4 1568.9 2121.5 2167.8 3540.3 True False 2530.048438166233 2444.698733569325 1617.7235442619358 2125.339576634631 1978.7310732854164 1568.6047284759063 1790.7285643446767 1791.2963795547407 1640.9836373393491 1678.0924743975131 2661.145802690709 0.950736496890955 0.918663957118572 0.6079048891745205 0.7986558175375738 0.7435635699797821 0.5894471196917792 0.6729163665268001 0.6731297389806844 0.6166455200162785 0.6305902039267365 1.0 11.377831841642394 -10.909822932657166 1.167852027374319 0.9996979079556899 0.718172298879941 0.0 0.15697460907219027 0.37466254633625956 0.9092001394676302 0.08445039967893493 0.020151938689518225 1.2307704691886669e-11 10.909822932657166 -0.28152560907574886 RKTSDANET(ph)EDHLESLICK ddPTM_A549_PD325901_60min_R1 1 RKTSDANETEDHLESLICK 19 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RKT(0.321)S(0.321)DANET(0.359)EDHLESLICK 115.36 2.2522999999999998e-14 6364900.0 1447.8 1377.5 1676.3 1757.4 1567.2 1079.4 1557.8 2221.6 1894.3 3208.6 4517.4 True False 1594.779590185972 1493.5867593366702 1790.0637984107789 1865.9506066550166 1457.1252785464897 1070.6097242739302 1617.0829314608693 2177.288445188514 1814.6891586056972 3006.0084484168997 3961.788438157992 0.4025403211402814 0.3769981114971156 0.45183225362812596 0.4709869382936001 0.36779482329550406 0.27023394635673764 0.40816993554878506 0.5495721134975168 0.4580479717512188 0.7587503712880045 1.0 11.951936126179339 -10.633124261746403 0.49242435861211037 1.1160302665816562 0.39122687805146056 0.7795692134657699 0.09257206843312192 0.29636596870648646 0.10009823961065441 0.10258995107098949 0.016456306989185262 2.327425231927216e-11 10.633124261746403 -0.7248033885301957 RKTSS(ph)DDES(ph)EEDEDDLLQR ddPTM_A549_PD325901_60min_R1 2 RKTSSDDESEEDEDDLLQR 19 2 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 2 RKT(0.017)S(0.15)S(0.833)DDES(1)EEDEDDLLQR;RKT(0.057)S(0.413)S(0.53)DDES(1)EEDEDDLLQR 170.59 3.6993999999999997e-34 76553000.0 8722.9 9690.1 9800.400000000001 9541.7 10405.9 9646.2 9215.2 9967.099999999999 9469.7 11557.2 12365.599999999999 True False 9608.442386540411 10506.71873440891 10465.51407859273 10131.069138227025 9675.025482406149 9567.644545387411 9565.889478750933 9768.298371461313 9071.721440768813 10827.47641963591 10844.709591996825 0.8860027375588966 0.9688335722851127 0.9650340555284271 0.9341945998907659 0.8921424221028583 0.8822407335322412 0.8820788973279989 0.900743195435138 0.8365112374667515 0.9984109143527796 1.0 13.40470379947566 -4.944074103388753 15.351105575050855 0.9188527296501741 0.6488943865299959 0.032225485777298446 0.0507174229518594 9076021.19990687 63340205.360704504 0.008473753137787365 74135672.2407213 1.1374331897693985e-05 4.944074103388753 -0.2699583431201782 RKVMDS(ph)DEDDDY ddPTM_A549_MK2206_60min_R1 4 RKVMDSDEDDDY 12 2 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 RKVMDS(1)DEDDDY;RKVMDS(0.983)DEDDDY(0.017);RKVMDS(0.719)DEDDDY(0.281);RKVMDS(1)DEDDDY 132.08 1.9944e-08 272474000.0 10727.9 12700.2 10798.5 9063.4 16758.9 10081.1 10049.7 9285.300000000001 18894.7 18598.1 19388.5 True False 12538.507248026765 13346.585933059869 12329.889675827582 11283.933406871492 14293.688010380582 11147.875310707404 11875.600404576162 10601.51971003865 14615.080618635782 14396.776293058587 14573.800354622152 0.8603457535391663 0.9157931087499037 0.8460311913026239 0.7742615606294303 0.9807797322986704 0.7649257598874546 0.8148595503992723 0.7274368697301612 1.0028324982509136 0.9878532670095607 1.0 13.831089512123222 -8.789751200031278 24.936781162653972 1.0013376195980648 0.8383317224517836 0.5344706307767499 0.06698948078917771 105.34286556802513 92784.50346451896 0.011189623420301316 0.011913377730271202 1.622739471139533e-09 8.789751200031278 -0.16300589714628122 RKVMDS(ph)DEDDDY ddPTM_A549_PD325901_60min_R1 5 RKVMDSDEDDDY 12 2 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 RKVMDS(0.906)DEDDDY(0.094);RKVMDS(0.993)DEDDDY(0.007);RKVMDS(0.974)DEDDDY(0.026);RKVMDS(0.964)DEDDDY(0.036);RKVMDS(0.998)DEDDDY(0.002) 133.14 1.746e-08 494770000.0 26248.9 25623.7 26982.300000000003 29567.7 29519.699999999997 37733.5 31529.4 33231.7 32537.5 34404.6 37034.0 True False 28913.669004581134 27783.099125382985 28813.481135750848 31394.02967588115 27446.338109436463 37426.210886502035 32729.268570549688 32568.867673735665 31170.06202720419 32232.28768447422 32479.05277786848 0.8902251307120376 0.8554159296269452 0.8871404388795665 0.9665931420658094 0.8450473693659762 1.1523184232763275 1.0077039128693959 1.0027653175873523 0.9596973852773117 0.9924023309706123 1.0 14.987221937793022 RKVMDSDEDDDY(ph) ddPTM_A549_MK2206_60min_R1 4 RKVMDSDEDDDY 12 2 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 RKVMDS(0.034)DEDDDY(0.966);RKVMDS(0.034)DEDDDY(0.966);RKVMDSDEDDDY(1);RKVMDSDEDDDY(1) 165.83 4.703e-15 76575000.0 8733.5 11944.3 10980.099999999999 8296.6 17354.8 9826.099999999999 10100.3 5943.099999999999 20288.0 17513.4 20390.7 True False 10207.501286425277 12552.2138517698 12537.243286526304 10329.267372448532 14801.931909764538 10865.8913799627 11935.393769599143 6785.552624980421 15692.800393278689 13557.110776415455 15327.126435309277 0.6659761912650592 0.8189541532620962 0.8179774166698405 0.673920673653013 0.9657343124452316 0.708932064064587 0.77871046604688 0.442715250873671 1.023857959253667 0.8845174490884203 1.0 13.903799622134839 RKVMDSDEDDDY(ph) ddPTM_A549_PD325901_60min_R1 3 RKVMDSDEDDDY 12 2 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 RKVMDS(0.028)DEDDDY(0.972);RKVMDSDEDDDY(1);RKVMDSDEDDDY(1) 181.25 1.4172e-19 92278000.0 12251.4 12341.3 13595.300000000001 15279.6 13424.7 23752.6 18683.199999999997 18696.399999999998 17610.1 20114.0 18556.5 True False 13495.153108996003 13381.344662796118 14517.958813180256 16223.386189510627 12481.79538470079 23559.16670074943 19394.19939983932 18323.48563495794 16870.00873777237 18843.998607323272 16274.168139345367 0.8292376601645981 0.8222444642466614 0.8920860770806959 0.99687959781416 0.7669697939597958 1.447641839449319 1.19171678907205 1.125924562046156 1.036612660833119 1.1579085607309743 1.0 13.990296180887336 RKVS(ph)SAEGAAK ddPTM_A549_MK2206_60min_R1 1 RKVSSAEGAAK 11 2 P05114;A6NL93;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 RKVS(0.787)S(0.213)AEGAAK 55.31399999999999 0.0035485 2526900.0 485.05 743.23 665.4 650.53 593.2 599.9 315.61 635.21 658.58 729.95 849.34 True False 566.9145816660656 781.0572324080005 759.7637255448135 809.9098792034017 505.94106580728857 663.3810198186087 372.9522516779883 725.2529627490392 509.41268153615323 565.0537880277076 638.4254374085041 0.8879887116767852 1.2234118295449932 1.1900586678200757 1.2686052775262011 0.7924826239082892 1.0390892670433125 0.5841751124326683 1.1360026093148563 0.7979204017997164 0.8850740508106528 1.0 9.318374325188346 -6.762795772226293 24.999952634573205 0.8995592882341411 1.1516902862585412 0.351075893054823 0.16425012581627407 29.870822183252052 550572.547866355 0.022445774288322982 0.044125215102590695 1.7266496612655903e-07 6.762795772226293 0.2521309980244001 RKVT(ph)AEADSSSPTGILATSESK ddPTM_A549_MK2206_60min_R1 1 RKVTAEADSSSPTGILATSESK 22 2 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 RKVT(0.905)AEADS(0.032)S(0.032)S(0.032)PTGILATSESK 81.34100000000001 0.00017088 4212200.0 1023.3 892.81 939.73 769.83 1611.0 1073.9 802.76 1056.9 1511.7 1442.4 1686.0 True False 1196.0080227170074 938.2502155001634 1072.9978446141083 958.4383845589824 1374.0240340787952 1187.5393852028737 948.6111009062511 1206.7188116205023 1169.3023636888506 1116.560838209693 1267.3196687672046 0.9437303406491228 0.7403421872343021 0.8466670809724556 0.7562720031728941 1.0841968825555972 0.9370480191142794 0.7485176189437824 0.9521818696259545 0.9226577891166945 0.8810411972030991 1.0 10.307564760502828 -11.757462093855432 0.06894834826454667 1.315399494522807 0.6711430206728545 0.026163209754673233 0.10395011867676932 103.86444730615065 1.1442960751108537 8.44038625077692 3.1983427995074103 1.7479858236745757e-12 11.757462093855432 -0.6442564738499524 RKVTAEADS(ph)SSPTGILATSESK ddPTM_A549_MK2206_60min_R1 1 RKVTAEADSSSPTGILATSESK 22 2 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 RKVT(0.084)AEADS(0.282)S(0.282)S(0.282)PT(0.07)GILATSESK 52.32899999999999 0.0029537 4488300.0 1273.5 1211.9 1094.3 1271.7 1452.0 1353.5 1323.2 1202.3 1870.6 1920.1 1759.6 True False 1488.4356659143064 1273.5805335565772 1249.4881948657796 1583.2665570887816 1238.4127234527691 1496.726471619414 1563.608312221774 1372.7297068893274 1446.9120867343802 1486.3480764326341 1322.6427575105404 1.1253497268724466 0.9629059141817649 0.9446906111046559 1.197047765239938 0.936316867438712 1.1316180904634685 1.1821849122470345 1.037868841827751 1.093955324306722 1.1237713796809485 1.0 10.369207730583506 -4.921795983471662 17.964987026293958 1.0513193152971974 3.0062427085282746 0.031317693060617824 0.08898639846109892 10599409.521310508 25717632.379396167 0.011345747458950497 815974869.41109 1.1973028506905841e-05 4.921795983471662 1.9549233932310772 RKVTAEADSS(ph)SPTGILATSESK ddPTM_A549_PD325901_60min_R1 1 RKVTAEADSSSPTGILATSESK 22 2 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 RKVT(0.004)AEADS(0.162)S(0.408)S(0.408)PT(0.018)GILATSESK 98.01899999999999 8.2733e-08 5854200.0 1591.2 1807.0 1913.7 2045.8 1973.6 2128.5 2442.8 2129.0 2262.1 2174.2 1875.1 True False 1752.7374526204721 1959.2822316670513 2043.5751900129503 2172.1644196510933 1834.9811445503788 2111.1662017019266 2535.76209075145 2086.535424831811 2167.0318036646504 2036.9206409487074 1644.4745872382452 1.0658343194977826 1.1914335720793952 1.2426918639375026 1.3208865837805728 1.1158464586747265 1.283793752779999 1.5419892228374572 1.2688158522023554 1.3177654555939324 1.238645252870427 1.0 10.683410998430634 -10.755548955524148 1.0013266469362256 0.9997381671023448 1.2668811643061797 0.045486072857382154 0.13563305911562157 0.4418010413469364 0.7853367988372293 0.08342278618706778 0.02118878237596022 1.7557029727254822e-11 10.755548955524148 0.26714299720383494 RKVTGTEGSSSTLVDYTSTSSTGGS(ph)PVRK ddPTM_A549_PD325901_60min_R1 1 RKVTGTEGSSSTLVDYTSTSSTGGSPVRK 29 3 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 RKVTGTEGSSSTLVDYTSTSS(0.002)T(0.042)GGS(0.956)PVRK 130.56 5.8324e-28 5727800.0 599.6 605.93 778.77 729.83 752.06 781.41 698.99 983.63 640.1 952.86 985.89 True False 660.4709505978099 656.9938476115201 831.6220153244426 774.9099415358087 699.2379000661521 775.0464560356596 725.5904469520046 964.0107280071929 613.1988230077112 892.6962569838946 864.6317800716304 0.763875404328873 0.7598539201937401 0.9618221704221269 0.8962311580446549 0.8087117732455124 0.8963890454864508 0.8391901196274478 1.1149378848037825 0.7092022721590349 1.0324582990807245 1.0 9.75594205412458 -5.732782881110427 23.951365937237675 0.8812157860010641 0.761864301063484 0.1703891257972716 0.11085732883090257 214.44758051077045 179232.09588967884 0.01645901840498576 0.06371495554955703 1.8501933637013459e-06 5.732782881110427 -0.11935148493758008 RKVYEDSGIPLPAES(ph)PK ddPTM_A549_MK2206_60min_R1 1 RKVYEDSGIPLPAESPK 17 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 RKVYEDSGIPLPAES(1)PK 63.857 0.00057949 2780900.0 620.5 993.28 889.97 773.87 1335.2 930.14 934.31 746.12 1680.6 1298.3 1969.3 True False 725.2252302315095 1043.8337093580972 1016.1811283785954 963.468184740345 1138.7938487287452 1028.566797423038 1104.06203309547 851.8847948966688 1299.9467833667268 1005.0131282914896 1480.2684600849668 0.48992817842641995 0.7051651355850557 0.6864843477920667 0.6508739534212884 0.7693157555105774 0.6948515253537177 0.7458525685483411 0.5754934445119306 0.8781831258446933 0.6789397703128811 1.0 10.531643130050371 -8.935171412571236 3.835381560853019 0.9494653016950968 0.6737884964941951 0.2690466139048927 0.11194707822695568 0.08503558945875862 2.3709449955422626 0.014237598784573416 0.014794396918882262 1.160990289782095e-09 8.935171412571236 -0.27567680520090165 RKYS(ph)EVDDSLPSGGEKPSK ddPTM_A549_MK2206_60min_R1 1 RKYSEVDDSLPSGGEKPSK 19 3 Q05D32;H0YMH7;Q05D32-2;H0YNU2;H0YNW9 Q05D32 CTDSPL2 CTD small phosphatase-like protein 2 1 RKYS(1)EVDDSLPSGGEKPSK 92.95 1.1297e-06 4893800.0 2659.3 2837.9 2576.0 2037.9 3941.6 2710.9 2034.6 2556.0 3393.3 3255.9 3370.9 True False 3108.1248263572184 2982.336988349048 2941.315535021702 2537.185591484808 3361.7958614059467 2997.7656386502163 2404.26048371102 2918.3208274217095 2624.7229679866223 2520.389928679244 2533.8124978928645 1.2266593636829701 1.1770156595364416 1.1608260427587755 1.0013312325180923 1.3267737309692957 1.1831047645171766 0.9488707178255766 1.1517509010033713 1.035878925599017 0.9947026193829327 1.0 11.30709405366777 -8.157503163113242 0.6744736016975345 1.0092231533947291 1.1781870474728673 0.3506402736615767 0.0920134840623775 0.5273589561077368 0.49264460060763093 0.021447441838334316 0.03158220652783836 6.958198867911452e-09 8.157503163113242 0.16896389407813817 RLAAAEETAVS(ph)PR ddPTM_A549_MK2206_60min_R1 6 RLAAAEETAVSPR 13 1 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEET(0.019)AVS(0.981)PR;RLAAAEET(0.006)AVS(0.994)PR 198.87 1.5184e-30 528803800.0 12314.1 13927.199999999999 11621.6 11984.300000000001 16222.600000000002 12943.5 10360.06 11969.699999999999 16970.8 17962.8 19006.300000000003 True False 14392.419029160088 14636.034992119126 13269.717632689517 14920.454037995665 13836.27702994827 14313.172578800068 12242.348799211246 13666.441630668856 13126.940896798791 13904.991004293586 14286.51116280553 1.0074131371296784 1.0244653033431683 0.9288284229418305 1.044373526046064 0.9684853686301363 1.0018661950206535 0.8569166159393629 0.9565975537994885 0.9188346088983823 0.9732950785419733 1.0 13.802366025678714 RLAAAEETAVS(ph)PR ddPTM_A549_PD325901_60min_R1 4 RLAAAEETAVSPR 13 1 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR 226.88 2.7826999999999994e-46 635510000.0 22859.7 22431.300000000003 21791.4 23420.300000000003 25895.9 22433.8 22306.300000000003 23903.7 26210.1 24864.4 28510.399999999998 True False 25180.399915578295 24321.664373654196 23270.295446333388 24866.918739639514 24077.061320005152 22251.106570702686 23155.178452975713 23426.921951410128 25108.580645077975 23294.457540614952 25003.801542316283 1.007062860939891 0.9727186616999962 0.9306702985524373 0.9945255203515709 0.9629360271180075 0.8899089417681166 0.9260663189070681 0.9369344062246913 1.0041905268918554 0.931636635380886 1.0 14.609859836408855 -8.770023951843351 24.772279443457688 1.0019788652518133 0.9513098289619122 0.0 0.03761804222560179 138.16738682258736 398704.81514391635 0.005563716883092379 0.005970493282146296 1.6981499949413637e-09 8.770023951843351 -0.05066903628990116 RLAAAEETAVS(ph)PRKS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RLAAAEETAVSPRKSPR 17 3 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 2 RLAAAEET(0.025)AVS(0.989)PRKS(0.986)PR;RLAAAEET(0.013)AVS(0.989)PRKS(0.999)PR 64.295 0.00082857 24897600.0 1576.07 1722.5700000000002 1706.9 1273.54 2154.58 1552.09 1288.18 1232.4299999999998 1899.74 1951.3200000000002 1812.06 True False 1842.0720847880327 1810.2414553086521 1948.9640864629437 1585.5573571713828 1837.6441361548682 1716.331133606041 1522.2256315279974 1407.1307266585811 1469.4519232613982 1510.515456749404 1362.0754916881976 1.3524008735410933 1.3290316626026242 1.430878169643401 1.164074507504863 1.349149990120765 1.2600851744852763 1.117578020320522 1.033078368449711 1.078832951791912 1.1089807180050095 1.0 10.411590950175052 -7.789549814966638 1.5852174513872601 1.035915264482165 1.3272650739011453 0.7820326073735588 0.06570886763107844 0.10947020317650563 0.5613048004649741 0.010362936948428198 0.01603566019168438 1.6234921200613534e-08 7.789549814966638 0.29134980941898037 RLAAAEETAVS(ph)PRKS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RLAAAEETAVSPRKSPR 17 3 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 2 RLAAAEET(0.006)AVS(0.994)PRKS(1)PR;RLAAAEET(0.015)AVS(0.985)PRKS(1)PR 85.932 1.3287e-05 22083000.0 2368.5 2111.1000000000004 2037.66 2272.6000000000004 2426.1 2405.6 2026.5700000000002 1911.63 2473.6 2333.2 2914.6000000000004 True False 2608.948376402456 2289.009805906096 2175.947861044985 2412.9733405509223 2255.6991055906337 2386.0095911741373 2103.692230331657 1873.501040005277 2369.643194175712 2185.8813538135964 2556.1226771716656 1.0206663395706976 0.8955007622869149 0.8512689474875511 0.9439974701139394 0.882469032388755 0.9334487786846923 0.8230012781152506 0.7329464492206198 0.9270459572768659 0.8551551039922157 1.0 11.319741362535432 -9.575355115157903 1.5640031679049835 0.9814907675839647 0.8860628782044575 0.0 0.07997628342285033 0.3525984310270517 1.7473852010969013 0.01724462202101347 0.013431317548692312 2.6585503197436177e-10 9.575355115157903 -0.09542788937950719 RLAAQESS(ph)EAEDMSVPR ddPTM_A549_MK2206_60min_R1 1 RLAAQESSEAEDMSVPR 17 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0 J3KP36 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 1 RLAAQES(0.029)S(0.965)EAEDMS(0.006)VPR 55.588 0.0028602 3763000.0 1255.8 1157.0 961.07 796.45 1283.9 893.25 902.92 802.89 1219.9 1244.3 1442.2 True False 1467.748338637759 1215.8863580534367 1097.3641775012832 991.5802857539991 1095.0400107720454 987.7731221086376 1066.9688764142115 916.7021162475022 943.5945977800009 963.2117657961189 1084.0619373049008 1.3539340217836127 1.1216022961531757 1.012270738173368 0.9146896977299827 1.0101267954250266 0.9111777548101653 0.9842323945685387 0.8456178422116049 0.8704249870868842 0.8885209715883681 1.0 10.082231471326109 -5.052931035321239 1.0361650349160971 0.9339796917646286 1.7264581458507384 0.8656242652726932 0.050417506847650714 0.7602477044574569 0.4793289329449934 0.00871138472007737 0.7342608280850197 8.85256174731197e-06 5.052931035321239 0.7924784540861098 RLAEDDWT(ph)GMESEEENKKDDEEMDIDTVK ddPTM_A549_MK2206_60min_R1 1 RLAEDDWTGMESEEENKKDDEEMDIDTVK 29 3 H3BTA6;H3BSK1;H3BUB4;H3BRI5;O95149 H3BTA6 SNUPN Snurportin-1 1 RLAEDDWT(0.592)GMES(0.408)EEENKKDDEEMDIDTVK 84.40799999999999 5.2729e-07 10962000.0 1608.5 1990.5 1571.3 1218.1 2691.7 2076.1 1766.1 2228.6 2908.2 2729.2 2872.8 True False 1879.9754759506582 2091.807947887092 1794.1339674610233 1516.5345546825877 2295.75449567343 2295.7915239963536 2086.9775092313143 2544.5108748012603 2249.4973434411013 2112.6718244882813 2159.4044747535136 0.8705990461399081 0.9686966811189286 0.8308466470441188 0.7022929573468135 1.063142418437139 1.0631595659068958 0.9664597501908638 1.178339169224749 1.0417211642102722 0.9783585470848084 1.0 11.07641778233804 -6.7886994416625654 24.99999982820148 1.034081603963263 0.8512034458644593 0.5937444865585139 0.0787214000009819 118.26731771624121 108461.77499547887 0.011159638379489134 0.02109336274238567 1.626674124254458e-07 6.7886994416625654 -0.1828781580988037 RLAEDDWTGMES(ph)EEENKKDDEEMDIDTVK ddPTM_A549_MK2206_60min_R1 2 RLAEDDWTGMESEEENKKDDEEMDIDTVK 29 3 H3BTA6;H3BSK1;H3BUB4;H3BRI5;O95149 H3BTA6 SNUPN Snurportin-1 1 RLAEDDWT(0.032)GMES(0.967)EEENKKDDEEMDIDT(0.001)VK;RLAEDDWTGMES(1)EEENKKDDEEMDIDTVK 85.65799999999999 2.1324000000000002e-07 19103200.0 3019.7 3001.7 2243.18 2172.6 3953.7 3715.3 2490.1 2948.9 4679.8 3820.1000000000004 4849.9 True False 3529.351535423187 3154.4737087026806 2561.2966544448686 2704.887097531719 3372.1159674347214 4108.450579983459 2942.5189376235185 3366.9156056274946 3619.832772104967 2957.136756825325 3645.535979569434 0.9681296674076526 0.8652976479675969 0.7025843850668504 0.7419724047960671 0.9249986795722133 1.1269812184019916 0.8071567402198709 0.9235721782740857 0.9929494023352081 0.8111665262386426 1.0 11.831915224926428 -6.960512535337743 7.4113602774079 0.9845521263455289 0.8159833156496389 0.1761153670394051 0.10862247532299867 0.16244737078782245 24.62726629047695 0.013657972550350745 0.0258196710286314 1.0951849438407706e-07 6.960512535337743 -0.16856881069589003 RLAEDDWTGMES(ph)EEENKKDDEEMDIDTVK ddPTM_A549_PD325901_60min_R1 3 RLAEDDWTGMESEEENKKDDEEMDIDTVK 29 3 H3BTA6;H3BSK1;H3BUB4;H3BRI5;O95149 H3BTA6 SNUPN Snurportin-1 1 RLAEDDWT(0.137)GMES(0.863)EEENKKDDEEMDIDTVK;RLAEDDWT(0.026)GMES(0.973)EEENKKDDEEMDIDT(0.001)VK;RLAEDDWT(0.174)GMES(0.826)EEENKKDDEEMDIDTVK 120.97 2.3511e-21 34053900.0 4694.0 4475.4 3653.56 4255.7 4339.400000000001 4616.2 3705.4 3602.8999999999996 4173.1 4938.0 5463.5 True False 5170.53142445984 4852.557664417668 3901.5125522410567 4518.564923604045 4034.6155141173076 4578.607197696233 3846.411024672683 3531.0373330796265 3997.719119346161 4626.213837275649 4791.524135980027 1.079099526105652 1.012737810914764 0.8142529269432695 0.9430329046396106 0.8420317626746325 0.9555638389286242 0.8027531356441688 0.7369340595750566 0.8343314164540869 0.9654994331630209 1.0 12.226268920511787 -5.585605458540099 5.779883420457892 0.8931793044427062 1.0639974575541913 0.40343040076043146 0.07877180693625573 0.15711901501614306 9.950024637461041 0.012535404953812867 0.051293170834505575 2.596537154834375e-06 5.585605458540099 0.17081815311148507 RLAS(ph)TSDIEEK ddPTM_A549_MK2206_60min_R1 4 RLASTSDIEEK 11 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.899)T(0.1)S(0.001)DIEEK;RLAS(0.972)T(0.028)SDIEEK;RLAS(0.91)T(0.09)SDIEEK;RLAS(0.495)T(0.495)S(0.011)DIEEK 238.07 5.2676e-50 281462000.0 41493.200000000004 37774.700000000004 35055.7 30255.6 43700.7 33621.5 29916.899999999998 32823.700000000004 42502.3 37402.6 37425.4 True False 48496.23774865767 39697.270881211036 40027.125388610315 37668.223358225485 37272.38491996722 37179.30481385457 35352.413479373936 37476.5599933654 32875.59691222636 28953.32668276612 28131.640291506592 1.7239036631397384 1.4111253545779305 1.422850746484739 1.3389984717527526 1.32492753830712 1.3216188046126702 1.2566780007508989 1.3321853829006975 1.1686341987726911 1.0292086200002923 1.0 14.77990605489776 -2.0000000000003215 0.0999530954955338 0.8018833534207008 3.0841412786824045 0.8644789964729874 0.06959719553113007 25.24781866270358 0.17326483402688986 0.43881532641311966 7.9366619991532605 0.009999999999992596 2.0000000000003215 2.2822579252617037 up RLAS(ph)TSDIEEK ddPTM_A549_PD325901_60min_R1 1 RLASTSDIEEK 11 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.907)T(0.073)S(0.02)DIEEK 80.74600000000001 7.5868e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RLAS(ph)TSDIEEKENR ddPTM_A549_MK2206_60min_R1 4 RLASTSDIEEKENR 14 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.974)T(0.023)S(0.004)DIEEKENR;RLAS(0.822)T(0.175)S(0.003)DIEEKENR;RLAS(0.987)T(0.004)S(0.009)DIEEKENR;RLAS(0.701)T(0.289)S(0.009)DIEEKENR 231.83 3.4089e-48 810350000.0 21162.0 21648.0 21485.100000000002 18307.2 22337.899999999998 14575.599999999999 14027.800000000001 14454.0 22295.2 23352.500000000004 23721.1 True False 24733.6282387739 22749.79073391598 24532.010249027448 22792.464821841433 19052.0245008372 16117.980317499767 16576.469681215705 16502.898763518522 17245.37279811845 18077.154030984377 17830.496200945265 1.387153108922604 1.2758921836796624 1.3758456283301252 1.2782855039464978 1.068507813025819 0.9039557921357954 0.9296695669264057 0.9255434384738905 0.9671841211690005 1.0138334809788432 1.0 14.122059231513035 -6.803118433366283 2.758638568019918 0.9697727263691527 1.3385475753613612 0.9452373392431271 0.04204851139685187 0.0433609245776741 0.6736977437233403 0.006225640207885915 0.013174533990160987 1.573553693289453e-07 6.803118433366283 0.36877484899220847 RLAS(ph)TSDIEEKENR ddPTM_A549_PD325901_60min_R1 5 RLASTSDIEEKENR 14 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.954)T(0.036)S(0.01)DIEEKENR;RLAS(0.935)T(0.064)S(0.001)DIEEKENR;RLAS(0.905)T(0.093)S(0.002)DIEEKENR;RLAS(0.918)T(0.081)SDIEEKENR;RLAS(0.333)T(0.333)S(0.333)DIEEKENR 233.63 1.2417e-48 362610000.0 15811.9 14154.3 17014.2 16803.5 18086.5 17967.9 18930.600000000002 27500.5 38528.7 65975.6 69458.90000000001 True False 17417.112447894433 15347.132535520168 18168.885926696094 17841.41403148262 16816.166635037713 17821.575379638252 19651.01434222181 26951.980953775084 36909.472726163374 61809.889356533655 60915.895636244735 0.2859206495444075 0.25193970104559504 0.29826182044815364 0.29288601677994613 0.27605547713612133 0.29256034395453395 0.3225925538313768 0.4424457799113234 0.6059087261322703 1.0146758692612408 1.0 15.894531119393136 -9.402298887290186 0.4932346818536621 1.0004196508954384 0.2511696748508618 0.9815099222317667 0.037334857471075726 0.08547843527644844 0.048001788670117417 0.02508131267594363 0.014103808593854083 3.9600540421924745e-10 9.402298887290186 -0.7492499760445765 down RLAST(ph)SDIEEKENR ddPTM_A549_MK2206_60min_R1 1 RLASTSDIEEKENR 14 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.096)T(0.452)S(0.452)DIEEKENR 97.095 1.5122e-05 12309000.0 1315.1 1905.1 1689.0 1953.8 2159.6 1679.4 1707.0 1589.5 2420.3 2700.1 2137.3 True False 1537.0567288919553 2002.0614526599857 1928.52559730266 2432.4810877094133 1841.925700804821 1857.1129933045015 2017.1398042341054 1814.8164926395953 1872.105914424902 2090.1455346991083 1606.5494235208457 0.9567441289938077 1.2461872777448406 1.2004147330096977 1.5141028667381367 1.1465104489397746 1.1559638104593952 1.255572828760803 1.1296362664413524 1.1652961851133554 1.3010153961640556 1.0 10.649749648896025 -10.133088328265043 0.47233138477427544 0.9809975834584075 1.220265682697865 0.0 0.1531007435361846 1.2029582653199749 0.4797823558645377 0.1273384516724348 0.03489025912104595 7.360573804571132e-11 10.133088328265043 0.23926809923945758 RLASTS(ph)DIEEKENR ddPTM_A549_MK2206_60min_R1 1 RLASTSDIEEKENR 14 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAS(0.111)T(0.111)S(0.778)DIEEKENR 80.638 0.00010305 10506000.0 1213.7 1911.1 1223.2 1875.2 2014.2 1343.4 1472.2 1080.5 1957.2 1884.5 1936.7 True False 1418.542887883937 2008.3668270319142 1396.6681531205536 2334.624084180926 1717.9138481946054 1485.5576963232509 1739.6796835345347 1233.6641838924716 1513.897325006163 1458.7901411579082 1455.7639397991966 0.9744319453877984 1.3795964937206384 0.9594056528926012 1.603710615680559 1.180077209792385 1.0204660630130487 1.1950286965993266 0.8474342234790067 1.0399332499024432 1.0020787720288833 1.0 10.507560718157736 -7.197830410402895 4.586595079755669 1.0195787931489368 1.2386613083196474 0.23453274341153385 0.1818539384968298 0.22414388321004378 9.541388562731298 0.024226602163719982 0.04235453455029699 6.341172822134835e-08 7.197830410402895 0.21908251517071053 RLASTS(ph)DIEEKENR ddPTM_A549_PD325901_60min_R1 4 RLASTSDIEEKENR 14 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RLAST(0.157)S(0.843)DIEEKENR;RLAST(0.137)S(0.863)DIEEKENR;RLAS(0.203)T(0.203)S(0.595)DIEEKENR;RLAS(0.176)T(0.176)S(0.649)DIEEKENR 148.44 5.816699999999999e-14 54405100.0 9003.1 9124.4 9702.0 11519.800000000001 12105.599999999999 10486.9 9593.2 11382.6 10785.5 9745.7 12497.8 True False 9917.088084268084 9893.34521008458 10360.436062865465 12231.351882635967 11255.34441805283 10401.498163320612 9958.274475600469 11155.565113523042 10332.222942586572 9130.35483878843 10960.649830081667 0.9047901573363366 0.9026239651350002 0.9452392169696995 1.11593309450201 1.026886598198071 0.9489855368587311 0.9085478169615304 1.0177831868058065 0.9426651797806396 0.8330121827019812 1.0 13.420045714238807 -6.000397430329155 23.57994311081328 0.9825130519497276 0.9087630999694515 0.12709780725797237 0.06869331147419577 7.839096990372024 465403.88423790515 0.007528851749942425 0.022995345160895752 9.990853014405878e-07 6.000397430329155 -0.07374995198027612 RLAVPTEVSTEVPEMDT(ph)ST ddPTM_A549_MK2206_60min_R1 4 RLAVPTEVSTEVPEMDTST 19 1 O00488 O00488 ZNF593 Zinc finger protein 593 1 RLAVPTEVSTEVPEMDT(0.365)S(0.318)T(0.318);RLAVPTEVSTEVPEMDT(0.345)S(0.327)T(0.327);RLAVPTEVSTEVPEMDT(0.366)S(0.317)T(0.317);RLAVPTEVSTEVPEMDT(0.355)S(0.322)T(0.322) 73.166 0.0013579 13102500.0 3114.79 3291.1699999999996 3228.0 3836.8 4806.3 3527.33 3371.4900000000002 3745.1499999999996 5810.0 5277.400000000001 5737.799999999999 True False 3640.490402695894 3458.6764952763438 3685.7789390722264 4776.816172240498 4099.299636867109 3900.5897193478445 3984.0460917265664 4276.0364815408475 4494.044276663502 4085.231674686521 4312.945904776073 0.8440844107653855 0.8019290229089756 0.8545850146162663 1.1075529992042665 0.9504639583648903 0.9043910601865901 0.9237412617011289 0.9914421780263108 1.041989483727789 0.9472021594712362 1.0 12.074457905812006 -4.185179533460901 0.36389286344604416 1.0165186588517714 0.38311937426438497 0.354337307712455 0.069337239577289 7.505938532400526 0.3736904832933406 0.01800016319478018 2.463617053569119 6.528606101087264e-05 4.185179533460901 -0.6333992845873864 RLAVPTEVSTEVPEMDT(ph)ST ddPTM_A549_PD325901_60min_R1 2 RLAVPTEVSTEVPEMDTST 19 1 O00488 O00488 ZNF593 Zinc finger protein 593 1 RLAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333);RLAVPTEVSTEVPEMDT(0.421)S(0.326)T(0.253) 112.34 7.9206e-10 3486700.0 1256.2 1285.2 1189.0 1606.7 1523.9 1098.7 988.17 1629.4 1638.7 1657.7 1855.9 True False 1383.7284992344378 1393.5083144097919 1269.6926900378317 1705.9422099195492 1416.8665211696002 1089.7525514728238 1025.775350097372 1596.9003387604273 1569.8311377327536 1553.0325390951475 1627.636065519418 0.8501461282088614 0.8561547288921063 0.7800839001639116 1.0481103522212392 0.8705057298650137 0.6695308457207585 0.6302240235565327 0.9811163395736244 0.9644853484072821 0.9541644916792485 1.0 10.668562438095874 -8.442810352580713 24.999997724048427 0.9826824902523135 0.8196423271049856 0.35341410974792564 0.10377873815323897 89.87629948868963 28061.749525823565 0.017793571986238127 0.021511377205253254 3.607361346426555e-09 8.442810352580713 -0.16304016314732783 RLDDQES(ph)PVYAAQQR ddPTM_A549_MK2206_60min_R1 2 RLDDQESPVYAAQQR 15 1 Q96ST3;H3BMA2;H3BT34;H3BQ76;H3BQ88;H3BNA0;H3BNZ3;H3BQL7;H3BP90 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 RLDDQES(0.999)PVY(0.001)AAQQR;RLDDQES(1)PVYAAQQR 67.928 0.0011737 23792100.0 2603.2 3020.5 2748.1 2327.2 3664.5 2607.2 2203.8999999999996 2275.8 3952.0 4148.700000000001 4467.0 True False 3042.556517870533 3174.2305484013887 3137.821902870006 2897.364104471977 3125.456904333797 2883.0921734807052 2604.320102256323 2598.4016193451957 3056.878310047189 3211.5057886027153 3357.7206170718287 0.9061374857696942 0.9453527885144726 0.9345095261696936 0.8628961235609545 0.9308269688796853 0.8586456415766262 0.7756214406329838 0.7738587916260844 0.9104028174663932 0.9564541410248053 1.0 11.713266478864002 -9.858427052006267 1.139548741272978 0.9849507216418306 0.8773815590727945 0.3133747902642564 0.05686998258146115 0.3541782064645813 0.9332746722758851 0.019277998922157313 0.011934103835566765 1.3853928693856419e-10 9.858427052006267 -0.10756916256903615 RLDDQES(ph)PVYAAQQR ddPTM_A549_PD325901_60min_R1 2 RLDDQESPVYAAQQR 15 1 Q96ST3;H3BMA2;H3BT34;H3BQ76;H3BQ88;H3BNA0;H3BNZ3;H3BQL7;H3BP90 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 RLDDQES(1)PVYAAQQR;RLDDQES(1)PVYAAQQR 149.47 2.8722e-14 47356000.0 5196.6 5601.0 5839.299999999999 6525.5 6575.5 6214.5 5641.5 6693.799999999999 6352.6 6419.5 7137.299999999999 True False 5724.1550064652765 6073.015926711209 6235.5900125634225 6928.565314514234 6113.6595642435195 6163.891172410911 5856.19036964725 6560.286907815485 6085.622313761578 6014.171674441272 6259.457347072437 0.9144810307146637 0.9702144435174678 0.9961869962225756 1.106895523100695 0.976707600236767 0.9847325144397345 0.9355747702931795 1.0480600064930143 0.9722284179486961 0.9608135882983714 1.0 12.611821875266966 -7.006224408737368 0.00235684000967786 1.3478235818188122 0.6285012327701225 0.00030315945163283953 0.05003764943563872 587442.9529272204 403.88341462385864 61099.90385298987 62168.30455092709 9.857699867304487e-08 7.006224408737368 -0.7193223490486897 RLDPDAIPS(ph)PIQVIEDDRNNR ddPTM_A549_PD325901_60min_R1 1 RLDPDAIPSPIQVIEDDRNNR 21 2 G5EA31;P53992 G5EA31 SEC24C Protein transport protein Sec24C 1 RLDPDAIPS(1)PIQVIEDDRNNR 58.284 0.00078724 1140100.0 195.07 189.7 192.44 152.83 195.59 239.85 113.32 161.35 164.17 147.33 213.15 True False 214.87336279705596 205.68668475220784 205.50013563572767 162.26996199788678 181.85243314886932 237.89674112201408 117.63245461108333 158.13174767337367 157.27050581655345 138.02755865650494 186.9339012691761 1.1494617152811055 1.100317723835596 1.0993197822358454 0.8680606401308963 0.9728167652533518 1.2726249198611326 0.6292729880049852 0.8459233269072545 0.8413161269773708 0.73837628016842 1.0 7.546384421552849 -7.748829221338919 24.99999486844793 0.895800036236728 1.0649235512053103 0.42425019513077666 0.1388570226568379 246.2139581516411 488124.88568497804 0.021289434282663923 0.031457436190818824 1.7830797943513187e-08 7.748829221338919 0.16912351496858236 RLDS(ph)ELKELR ddPTM_A549_PD325901_60min_R1 2 RLDSELKELR 10 2 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 1 RLDS(1)ELKELR;RLDS(1)ELKELR 66.98899999999999 0.0015769 16366100.0 2169.8 2539.1 2428.4 2741.3 3051.8999999999996 2976.5 2350.9 3181.5 3001.0 3110.0 3075.5 True False 2390.076498677663 2753.078867972226 2593.205827155484 2910.6238750559887 2837.5450724834304 2952.260370855431 2440.364785961842 3118.042486661533 2874.878406258617 2913.63406924408 2697.2329972008015 0.8861216295211031 1.020704874524886 0.9614318932946181 1.079114736500942 1.0520207469759733 1.0945514806912484 0.9047660281831275 1.1560152533716772 1.0658620924637123 1.0802307669629803 1.0 11.397264437079885 -4.215243657662008 0.990304574101026 1.0386739854154747 1.213372049963825e-17 0.3343430069990785 0.06449999605925817 11.092768190642406 1.7229313280183403 0.008998025668680052 19.972931503763633 6.091950170489231e-05 4.215243657662008 -1.0386739854154747 RLDS(ph)LK ddPTM_A549_MK2206_60min_R1 1 RLDSLK 6 1 Q9Y2G1-2;Q9Y2G1;B4DHB2 Q9Y2G1-2 MYRF Myelin regulatory factor;Myelin regulatory factor, N-terminal;Myelin regulatory factor, C-terminal 1 RLDS(1)LK 60.91 0.026438999999999997 3492500.0 1085.0 1526.8 1019.4 932.85 1374.2 1134.7 897.95 1147.9 1429.8 1407.4 1518.8 True False 1268.121474296838 1604.5075985099281 1163.9662486029197 1161.398291877228 1172.0570003917323 1254.773200847099 1061.095891746933 1310.6183402963145 1105.9525829214247 1089.4673625182486 1141.64004325245 1.110789238509935 1.4054408900539281 1.0195562563545546 1.0173068987388427 1.026643211508793 1.0990970475004895 0.929448733003397 1.1480136388370346 0.9687401816869052 0.95430023583829 1.0 10.156892128292473 -5.835578144141081 9.333334504644979 1.0060473775376362 1.2575144903739373 0.5287418711063341 0.08680072297120964 0.13280768807323345 15.415789554636504 0.010500064216171178 0.03280557186610803 1.4602319811005804e-06 5.835578144141081 0.2514671128363011 RLDS(ph)LK ddPTM_A549_PD325901_60min_R1 1 RLDSLK 6 1 Q9Y2G1-2;Q9Y2G1;B4DHB2 Q9Y2G1-2 MYRF Myelin regulatory factor;Myelin regulatory factor, N-terminal;Myelin regulatory factor, C-terminal 1 RLDS(1)LK 98.62899999999999 0.01425 6973200.0 1641.5 1630.9 1945.5 1578.2 2100.4 2320.8 1969.7 1705.5 1766.3 2480.2 2656.2 True False 1808.1438715915695 1768.3416666440485 2077.533329241884 1675.6818296477454 1952.875149986632 2301.900174258789 2044.6580113611974 1671.4824645611334 1692.068553473707 2323.599748726419 2329.5042390391054 0.77619256547797 0.7591064386186607 0.8918349640345979 0.7193298048424868 0.8383222134818571 0.9881502405886572 0.8777223827695614 0.7175271186673613 0.7263642302585662 0.9974653446798954 1.0 11.185807240407934 -10.947487118063483 1.2224170871923852 0.9994742586219688 0.8060380772304833 0.4446115312116421 0.080798034261318 0.3768711480840165 1.0054769287717753 0.06042197726257579 0.014273229576473466 1.1285294111942121e-11 10.947487118063483 -0.19343618139148555 RLDS(ph)SGER ddPTM_A549_MK2206_60min_R1 6 RLDSSGER 8 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RLDS(0.989)S(0.011)GER;RLDS(0.998)S(0.002)GER;RLDS(0.988)S(0.012)GER;RLDS(0.993)S(0.007)GER;RLDS(0.97)S(0.03)GER;RLDS(0.688)S(0.312)GER 101.39 0.00096162 809086000.0 7567.499999999999 7418.18 6853.969999999999 6424.52 8934.04 7333.03 6625.63 6293.299999999999 9624.42 10408.050000000001 10546.849999999999 True False 8844.70899238831 7795.733676391396 7825.9660083744875 7998.5276884076575 7619.854550851223 8109.006367328634 7829.421207456136 7185.394547422939 7444.504237040578 8056.864276295345 7927.776066748154 1.1156608004464317 0.9833443339916488 0.9871578034600783 1.0089245232286845 0.9611591556945634 1.0228601689874444 0.9875936380563834 0.9063569009675965 0.9390406810638123 1.01628302924557 1.0 12.952700496435394 RLDS(ph)SGER ddPTM_A549_PD325901_60min_R1 7 RLDSSGER 8 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RLDS(0.859)S(0.141)GER;RLDS(0.997)S(0.003)GER;RLDS(0.995)S(0.005)GER;RLDS(0.88)S(0.12)GER;RLDS(0.518)S(0.482)GER;RLDS(0.955)S(0.045)GER;RLDS(0.975)S(0.025)GER 98.898 0.0010135 858255000.0 9921.140000000001 10636.84 11015.419999999998 10673.9 13343.950000000003 11020.56 11050.28 11532.66 9448.88 11133.839999999998 12554.97 True False 10928.32682924275 11533.243836793228 11762.99264230154 11333.202560814256 12406.716986128407 10930.812213215027 11470.804452345234 11302.632049103247 9051.776432965311 10430.847442286975 11010.78828251216 0.9925108492549639 1.0474494233179341 1.0683152141780863 1.0292816708513204 1.1267782712554129 0.9927365718743176 1.0417786772418187 1.0265052563997263 0.8220825067848919 0.9473297619257403 1.0 13.42663013733104 -8.616007011442345 8.69329681649519 0.9160661946058622 1.0439032361685887 0.5031365974420509 0.05206692526218295 0.19077878315298288 16.02203216216936 0.011710440993737782 0.013277367097224152 2.4209899608871497e-09 8.616007011442345 0.12783704156272646 RLDS(ph)VTR ddPTM_A549_PD325901_60min_R1 2 RLDSVTR 7 1 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 RLDS(0.997)VT(0.003)R;RLDS(0.992)VT(0.008)R 57.348 0.014803 13877000.0 996.5799999999999 1205.3400000000001 913.52 1234.1399999999999 1323.98 1150.8000000000002 1330.15 1284.44 1132.34 1506.4 1338.8899999999999 True False 1097.7520679565794 1306.918231941098 975.5169606420179 1310.370024864699 1230.9882122830406 1141.4282663465244 1380.7695861360082 1258.820836576313 1084.7516876184206 1411.285646916167 1174.2150179229984 0.9348816453551497 1.1130144070656076 0.8307822211025319 1.1159540670690258 1.0483499133407994 0.972077727608638 1.1759086411434019 1.0720530885416275 0.9238100953070552 1.2018971188194385 1.0 10.197480898295447 -8.759968317504804 24.999965790271887 0.9640214342279714 1.034838403172551 0.0 0.11647277783826639 64.33355353647275 1093314.109721753 0.015125000038319498 0.016700059738947535 1.7379276087961715e-09 8.759968317504804 0.07081696894457967 RLDSDAVNTIESQS(ph)VSPDHNKEPK ddPTM_A549_PD325901_60min_R1 1 RLDSDAVNTIESQSVSPDHNKEPK 24 2 Q3T7B4;Q9H3H1-6;Q9H3H1-3;Q9H3H1-2;Q9H3H1-5;Q9H3H1-4;Q9H3H1 Q3T7B4 TRIT1 tRNA dimethylallyltransferase, mitochondrial 1 RLDSDAVNTIES(0.008)QS(0.496)VS(0.496)PDHNKEPK 115.76 2.5059999999999997e-16 13511000.0 1797.9 1571.8 1673.0 1622.0 2221.6 2038.8 1426.3 1613.1 1946.5 2108.3 2885.1 True False 1980.4214844559738 1704.2611022325802 1786.5398405662677 1722.1872561707276 2065.562480103931 2022.1966887619856 1480.5786270013068 1580.925455047531 1864.695374136086 1975.18157819527 2530.250990155757 0.7826976423133671 0.673554168682558 0.706072183161676 0.6806389021765439 0.8163468715713375 0.7992079428600494 0.585150893236155 0.6248097367408648 0.7369606340995046 0.780626738564652 1.0 11.305064785902987 -10.359543338987171 0.7778617222694002 0.9975457899065817 0.7093719080019102 0.2625464188300187 0.09211311339099354 0.2826785833982947 0.31659893776069253 0.04564154202338246 0.014512851244207862 4.369750704070876e-11 10.359543338987171 -0.2881738819046715 RLDSDAVNTIESQSVS(ph)PDHNKEPK ddPTM_A549_MK2206_60min_R1 2 RLDSDAVNTIESQSVSPDHNKEPK 24 2 Q3T7B4;Q9H3H1-6;Q9H3H1-3;Q9H3H1-2;Q9H3H1-5;Q9H3H1-4;Q9H3H1 Q3T7B4 TRIT1 tRNA dimethylallyltransferase, mitochondrial 1 RLDSDAVNTIESQS(0.001)VS(0.999)PDHNKEPK;RLDSDAVNTIES(0.007)QS(0.168)VS(0.825)PDHNKEPK 192.55 1.1326999999999998e-51 19499200.0 5447.299999999999 6094.7 5457.9 5247.2 7680.0 5511.3 5690.5 5150.8 8915.2 7775.299999999999 8603.1 True False 6366.671066301529 6404.894197431534 6231.912289827226 6532.764235555758 6550.282173634479 6094.502107895145 6724.390190974914 5880.94167366343 6895.921434648958 6018.854329819623 6466.712836519059 0.9845297336148019 0.9904404848877129 0.963690896344452 1.0102140609466514 1.0129230011024277 0.9424420508481601 1.0398467290832352 0.9094174772153728 1.0663719897543704 0.9307440243565056 1.0 12.658816831567393 -8.803321179133665 24.999995558584345 1.0313423111042135 0.9840020416290243 0.0 0.047401534954507114 146.55458427630458 87480.48485522735 0.006486038643136414 0.006904944643100955 1.5728192678989844e-09 8.803321179133665 -0.04734026947518921 RLDSDAVNTIESQSVS(ph)PDHNKEPK ddPTM_A549_PD325901_60min_R1 2 RLDSDAVNTIESQSVSPDHNKEPK 24 2 Q3T7B4;Q9H3H1-6;Q9H3H1-3;Q9H3H1-2;Q9H3H1-5;Q9H3H1-4;Q9H3H1 Q3T7B4 TRIT1 tRNA dimethylallyltransferase, mitochondrial 1 RLDSDAVNTIES(0.001)QS(0.019)VS(0.98)PDHNKEPK;RLDSDAVNTIES(0.013)QS(0.106)VS(0.881)PDHNKEPK 175.39 6.367599999999999e-42 28239000.0 4984.1 4560.8 4409.0 5510.7 5455.8 6023.299999999999 5068.9 5340.4 6132.6 6075.9 6270.1 True False 5490.082162899505 4945.154622128994 4708.221253470815 5851.083423292249 5072.60342948822 5974.248241818753 5261.7997633085115 5233.881532537243 5874.868148690968 5692.266637080417 5498.917449438712 0.9983932680167606 0.8992960282816681 0.8562087532249453 1.0640427824370202 0.9224731005929164 1.08644079434736 0.9568792060782066 0.9518021648190916 1.06836812931073 1.0351613184630442 1.0 12.424931913472475 -6.266640661640144 24.99944910787513 1.019520281125295 0.91609901723912 0.3224028495758592 0.05880765324485989 331.0125940112389 1590982.6162288932 0.008159313377580524 0.01950409346619945 5.412019320911499e-07 6.266640661640144 -0.10342126388617501 RLDSS(ph)GER ddPTM_A549_PD325901_60min_R1 1 RLDSSGER 8 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RLDS(0.364)S(0.636)GER 83.397 0.0014044 247340000.0 632.64 618.29 694.33 930.31 968.43 719.21 958.5 574.88 667.39 634.15 668.9 True False 696.8651470750475 670.3954681889436 741.4514091454727 987.7731358126935 900.4108177021297 713.3529922133152 994.9762420113259 563.4135674153645 639.3419192112424 594.1096607752836 586.6295405064595 1.1879134938779548 1.1427918676072224 1.2639176140113053 1.6838107657516044 1.534888299223341 1.2160195540058392 1.6960895647231218 0.9604248141492298 1.0898563319182226 1.0127510119288679 1.0 9.196305911515886 -8.289782652308832 24.957980093500943 1.0374671970088507 1.3852970224589214 0.4953270733516847 0.18088966100674153 478.6668834517963 421493.9777288939 0.03006223309359587 0.0363470280437558 5.131181156332199e-09 8.289782652308832 0.3478298254500707 RLDT(ph)PLLR ddPTM_A549_MK2206_60min_R1 1 RLDTPLLR 8 1 Q9P225-3;Q9P225-2;Q9P225 Q9P225-3 DNAH2 Dynein heavy chain 2, axonemal 1 RLDT(1)PLLR 49.35 0.027887000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RLDT(ph)PLLR ddPTM_A549_PD325901_60min_R1 1 RLDTPLLR 8 1 Q9P225-3;Q9P225-2;Q9P225 Q9P225-3 DNAH2 Dynein heavy chain 2, axonemal 1 RLDT(1)PLLR 72.848 0.0033731 3407900.0 322.21 278.61 253.91 629.74 344.74 571.18 290.89 474.89 261.68 518.84 483.97 True False 354.9205220015349 302.08944248188016 271.14185948486625 668.6376095566915 320.5266516884361 566.5284994541253 301.95997813111563 465.4179464060017 250.68249961671256 486.0803538542114 424.4447581386027 0.8361995647161117 0.7117285269505735 0.6388154271805725 1.5753230467234265 0.7551669458567514 1.3347520227099259 0.7114235064543085 1.0965336182901313 0.5906127824880618 1.14521464698 1.0 8.729432987733038 RLDVFEK ddPTM_A549_PD325901_60min_R1 2 RLDVFEK 7 1 A0A087WW66;Q99460-2;Q99460;H7BZR6;C9J9M4 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 ; 77.058 0.017577000000000002 3289000.0 1344.73 1214.26 1492.62 1567.81 1718.55 1742.1799999999998 1598.48 1439.25 1616.32 1510.1 2229.31 False True 1481.245999662095 1316.5899516458405 1593.9181690532098 1664.650062945146 1597.8449766756446 1727.9922636979388 1659.311031121819 1410.5430296802176 1548.3916913042083 1414.752028284721 1955.119002760435 0.7576244707205658 0.6734065546838558 0.8152537859857915 0.8514315806837458 0.8172622609772834 0.8838297112647283 0.8487007843405111 0.7214614699609948 0.7919680025195561 0.7236142793800433 1.0 10.933040707778979 -10.654635794561836 0.7107171209690282 1.0153774639343858 0.7955160406453525 0.0 0.10002791235032253 0.46432067063853266 0.37361660146464404 0.06019345235971785 0.012444505905783412 2.214951420263528e-11 10.654635794561836 -0.21986142328903324 RLEDEQPST(ph)LSPK ddPTM_A549_PD325901_60min_R1 1 RLEDEQPSTLSPK 13 1 A0A1W2PNX9;A0A1W2PRA7;A0A1W2PRB0;A0A1W2PNW6;A0A1W2PPY5;Q12791-2;Q5SVJ7;A0A1W2PQ93;H0Y379;H0Y382;A0A1W2PQ61;A0A1W2PQU4;Q12791-5;A0A1W2PSD3;A0A1W2PNQ3;A0A1W2PQK5;D5MRH1;S4R2X4;A0A1W2PNY8;A0A1W2PQA0 A0A1W2PNX9 KCNMA1 1 RLEDEQPS(0.265)T(0.479)LS(0.257)PK 118.24 8.6512e-06 20850000.0 2819.1 3335.5 2903.8 3457.1 3407.5 2633.7 3257.5 3322.0 3248.0 3198.3 3270.2 True False 3105.292956688268 3616.5942909382698 3100.869329967916 3670.6372153562406 3168.168955236834 2612.2520204004513 3381.4659450723952 3255.7401039414162 3111.497855224254 2996.3587921747076 2867.9861315057924 1.082743365658425 1.261022238290752 1.0812009499989639 1.2798657479661621 1.1046667626574034 0.9108314687103902 1.1790384576570487 1.1352007836356026 1.0849068693336428 1.0447605583788213 1.0 11.485822332392214 -14.999999999999632 0.05600244545873562 0.4718219194123733 1.3619356597636791 0.17982646834475768 0.09265025791386568 300.416735333971 1.2769460282857765 22.36006697592586 4.434164148346923 1.0000000000008467e-15 14.999999999999632 0.8901137403513059 RLEDEQPSTLS(ph)PK ddPTM_A549_PD325901_60min_R1 1 RLEDEQPSTLSPK 13 1 A0A1W2PNX9;A0A1W2PRA7;A0A1W2PRB0;A0A1W2PNW6;A0A1W2PPY5;Q12791-2;Q5SVJ7;A0A1W2PQ93;H0Y379;H0Y382;A0A1W2PQ61;A0A1W2PQU4;Q12791-5;A0A1W2PSD3;A0A1W2PNQ3;A0A1W2PQK5;D5MRH1;S4R2X4;A0A1W2PNY8;A0A1W2PQA0 A0A1W2PNX9 KCNMA1 1 RLEDEQPS(0.056)T(0.244)LS(0.7)PK 129.43 1.971e-08 16012000.0 2050.1 2883.7 2491.0 2504.7 3069.6 2317.0 2366.8 2440.7 2408.2 2890.8 3070.0 True False 2258.2246427961463 3126.7195193460293 2660.0542395998627 2659.409630413576 2854.0018855451176 2298.1311201989006 2456.8698691626555 2392.018323807889 2306.9917287410863 2708.2743946529854 2692.40946233343 0.8387374485153574 1.161309066502907 0.9879828000955226 0.987743382876372 1.0600177742176111 0.853559294137668 0.9125171722704319 0.8884303659127682 0.8568502529112664 1.0058924664102933 1.0 11.394682116733817 -7.253609608188579 24.96117508974781 0.9205785953215342 1.0135781473515129 0.20758179806559085 0.08480485423619909 702.770017276851 2240416.0042212224 0.012415828900070152 0.021254781114841095 5.57686834158712e-08 7.253609608188579 0.09299955202997867 RLEDQAATPTGLGSLTPSAAGST(ph)ASLVGVGLPPPTPR ddPTM_A549_PD325901_60min_R1 1 RLEDQAATPTGLGSLTPSAAGSTASLVGVGLPPPTPR 37 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 RLEDQAATPTGLGSLT(0.011)PS(0.224)AAGS(0.224)T(0.284)AS(0.224)LVGVGLPPPT(0.033)PR 91.869 3.7745e-09 8612100.0 1070.4 647.98 822.09 806.65 1139.9 864.06 907.88 1104.0 1062.5 983.86 933.48 True False 1179.0662200131683 702.5875486860076 877.8819710287638 856.4749384649301 1059.837356441517 857.0233818381796 942.4298702109982 1081.9798539287538 1017.8468199432785 921.738911693402 818.667877817267 1.4402253367468083 0.8582082767913737 1.072329811411892 1.04618119468479 1.2945876895368806 1.0468511163808896 1.1511748484913142 1.3216346741410319 1.2432963934740697 1.1259009137514262 1.0 9.677134478997157 RLEDQAATPTGLGSLTPSAAGSTASLVGVGLPPPT(ph)PR ddPTM_A549_PD325901_60min_R1 1 RLEDQAATPTGLGSLTPSAAGSTASLVGVGLPPPTPR 37 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 RLEDQAATPTGLGSLT(0.014)PS(0.036)AAGS(0.064)T(0.064)AS(0.053)LVGVGLPPPT(0.768)PR 78.639 7.7157e-06 8665000.0 660.97 675.88 1029.4 904.02 1079.6 691.88 680.11 1244.7 976.72 998.56 690.62 True False 728.0711878196032 732.8387796010664 1099.2612742850656 959.859262221616 1003.7726204178095 686.2455586720833 705.9919582204717 1219.8734820517404 935.6718550352929 935.5107511846842 605.6781182008837 1.202076096099159 1.2099475902776593 1.8149265117094366 1.5847679375850623 1.6572707354847693 1.1330202265033422 1.1656223611273293 2.014062330128869 1.5448335129138033 1.5445675236931802 1.0 9.242407480753647 -10.664555729486347 0.9923009940108699 1.0070620467676263 1.4854385889562176 0.0 0.31403496782433904 0.537806709655616 0.9639937016841615 0.17438154884567106 0.0493232696598221 2.16493205332183e-11 10.664555729486347 0.47837654218859127 RLEEETEYLNS(ph)QLEDAIR ddPTM_A549_PD325901_60min_R1 1 RLEEETEYLNSQLEDAIR 18 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 RLEEETEY(0.001)LNS(0.999)QLEDAIR 86.546 7.5996e-06 1609300.0 425.42 200.13 351.3 306.79 147.86 206.89 144.66 410.29 471.53 226.89 324.85 True False 468.60832522234836 216.99565745629607 375.1413305385112 325.7397215293573 137.47482368930832 205.20515643416087 150.16511546098937 402.10644408372184 451.71323388974537 212.56412667871035 284.89550939381576 1.6448427924309026 0.7616675247637525 1.316768141894252 1.143365587693704 0.4825447195774315 0.7202821724736362 0.5270883903382754 1.4114172769493656 1.5855400278188827 0.7461125910021961 1.0 8.154289071435327 -8.298793753252463 24.97520210250133 1.2943493208399832 0.9313192704006122 0.059441344571118604 0.38452710711709537 754.5319485713723 504479.50509159255 0.062429805807204225 0.07547487451498863 5.0258120901873445e-09 8.298793753252463 -0.363030050439371 RLEEIPLIK ddPTM_A549_PD325901_60min_R1 1 RLEEIPLIK 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 65.305 0.009004600000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RLEEQAAQHK ddPTM_A549_PD325901_60min_R1 1 RLEEQAAQHK 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 33.056999999999995 0.05600499999999999 3636400.0 676.79 860.68 760.83 870.04 745.73 772.46 921.94 901.93 967.78 855.26 1079.8 False True 745.4972225735346 933.2125241567223 812.4644990424581 923.7803947957948 693.3524974288374 766.1693418682969 957.0249312049255 883.9402985996029 927.1075721456064 801.2587376404151 946.9914454161682 0.7872269872996749 0.9854497933153024 0.8579428071659186 0.9754896934573966 0.7321634221565056 0.809056243936389 1.0105951176616468 0.933419518072989 0.9790031120483632 0.8461097948865749 1.0 9.887207583038169 -7.770029614897266 24.999839689669063 0.9860799930567025 0.8633196597643877 0.20460361515808656 0.0834881646548267 137.04190055205788 398827.48680080584 0.010845616465870383 0.015111665664769784 1.698127851781185e-08 7.770029614897266 -0.12276033329231473 RLEGTEHRQDNDT(ph)GNEEQEEEEDDEEEMEEK ddPTM_A549_MK2206_60min_R1 5 RLEGTEHRQDNDTGNEEQEEEEDDEEEMEEK 31 2 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 RLEGT(0.003)EHRQDNDT(0.997)GNEEQEEEEDDEEEMEEK;RLEGT(0.006)EHRQDNDT(0.994)GNEEQEEEEDDEEEMEEK;RLEGT(0.002)EHRQDNDT(0.998)GNEEQEEEEDDEEEMEEK;RLEGTEHRQDNDT(1)GNEEQEEEEDDEEEMEEK;RLEGTEHRQDNDT(1)GNEEQEEEEDDEEEMEEK 251.04 6.799099999999998e-139 70542300.0 1446.47 2022.01 2150.27 2176.5 2752.99 2138.1499999999996 1919.38 2406.04 3553.3199999999997 2975.95 3343.51 True False 1690.5987732038218 2124.9216722970014 2455.210619367668 2709.7425977067974 2348.0288178638007 2364.4076138108962 2268.1065011428586 2747.1035381884694 2748.4986934860513 2303.680828112963 2513.2241908184074 0.6726812432333362 0.8454962673286385 0.9769166747388949 1.0781937431631978 0.9342695436570614 0.940786588975554 0.9024688324380132 1.0930594843963768 1.0936146100802209 0.9166236886184003 1.0 11.295323656459804 -4.689191035949304 0.8417455911123887 1.0293322306962789 2.613281520238051e-11 0.6166470159428967 0.07284916080795868 2.2208793041608574 0.5882068225835614 0.011221090853120338 2.6697569647997685 2.045544651716542e-05 4.689191035949304 -1.029332230670146 RLEGTEHRQDNDT(ph)GNEEQEEEEDDEEEMEEK ddPTM_A549_PD325901_60min_R1 5 RLEGTEHRQDNDTGNEEQEEEEDDEEEMEEK 31 2 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 RLEGTEHRQDNDT(1)GNEEQEEEEDDEEEMEEK;RLEGTEHRQDNDT(1)GNEEQEEEEDDEEEMEEK;RLEGT(0.025)EHRQDNDT(0.975)GNEEQEEEEDDEEEMEEK;RLEGTEHRQDNDT(1)GNEEQEEEEDDEEEMEEK;RLEGTEHRQDNDT(1)GNEEQEEEEDDEEEMEEK 296.41 6.722999999999998e-186 133631100.0 2920.23 3687.66 3533.02 3892.86 3372.3799999999997 3476.3099999999995 3850.92 4131.110000000001 3840.93 4391.93 3970.4100000000003 True False 3216.6895998402983 3998.432050043894 3772.791982975154 4133.313120873475 3135.515662879409 3448.0000839269055 3997.468867904283 4048.7117702568994 3679.509069293872 4114.622790268538 3482.074740502695 0.9237853405110759 1.1482901281626867 1.0834896618073422 1.1870259626525888 0.9004733949009794 0.9902142661731407 1.14801351659878 1.1627297148918754 1.0567001984462498 1.1816583780951595 1.0 11.765731454507895 -10.068378733733828 1.1213991281475753 1.007510237257613 1.0696593409004076 0.0 0.10519799169524877 0.9208042839485353 2.324173857435098 0.031083702259469177 0.01671030312074562 8.543213627658118e-11 10.068378733733828 0.06214910364279458 RLEIS(ph)PDSSPER ddPTM_A549_MK2206_60min_R1 2 RLEISPDSSPER 12 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 RLEIS(1)PDSSPER;RLEIS(0.999)PDS(0.001)SPER 104.94 7.1379e-05 13995100.0 1097.98 964.47 527.84 633.08 948.6700000000001 656.91 416.83 737.76 1245.47 983.01 1695.6399999999999 True False 1283.292180966306 1013.5574034155555 602.6956490705957 788.1846284200411 809.1218996955497 726.4237801784328 492.56261546508654 842.339739295242 963.3730336069007 760.9473582699048 1274.565790716739 1.0068465592856213 0.7952177995029914 0.4728635065057536 0.6183946204744861 0.6348216040229263 0.5699382373741068 0.3864552297360021 0.6608836871587154 0.7558441004957129 0.5970247780163579 1.0 10.315790129180336 -9.707831941046912 0.872116593768894 0.9651095259486592 0.635463016391359 0.0 0.19070316974024304 0.3749541663091367 0.5974338431309633 0.056496094938632925 0.033793774105789945 1.9596028343912072e-10 9.707831941046912 -0.3296465095573001 RLEQTSVRDPS(ph)PEADAPVLGSPEK ddPTM_A549_PD325901_60min_R1 1 RLEQTSVRDPSPEADAPVLGSPEK 24 2 O15234 O15234 CASC3 Protein CASC3 1 RLEQT(0.183)S(0.183)VRDPS(0.634)PEADAPVLGSPEK 72.22800000000001 1.4978e-05 7171800.0 1781.7 1592.3 2012.8 1818.8 2091.3 2009.4 1792.4 1889.9 1927.5 2241.7 2018.0 True False 1962.5768723817841 1726.4887091773371 2149.40071194966 1931.1431452054985 1944.414302593335 1993.036112614446 1860.6107628389143 1852.2044619021306 1846.493878061807 2100.158679429085 1769.798793155981 1.1089265514087243 0.9755282441449677 1.214488743162016 1.091165364488582 1.0986640459427437 1.1261371181411977 1.0513120305167536 1.0465621680073587 1.0433354826562289 1.18666522293418 1.0 10.789369635582633 -8.649995854191527 0.6905456305554851 1.0107591737230863 1.1010955818924535 0.0 0.0751518027983303 0.5264585374135231 0.5267546889088045 0.01389483412999202 0.015020952977585307 2.2387425096742413e-09 8.649995854191527 0.09033640816936717 RLES(ph)SGAGGR ddPTM_A549_MK2206_60min_R1 1 RLESSGAGGR 10 1 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 RLES(0.986)S(0.014)GAGGR 43.897 0.050203 6235600.0 1004.8 941.78 956.95 704.82 1100.3 649.01 690.79 850.19 1148.0 1381.5 1207.0 True False 1174.3856749985828 989.7125793323819 1092.6598995493073 877.5009316405727 938.4473275585964 717.687807422029 816.2976012694077 970.7070360976766 887.9798329792945 1069.418190506581 907.2685884946716 1.2944189734895468 1.0908705447132259 1.2043400525551475 0.9671898077023817 1.0343655004254653 0.7910422740555886 0.899730919400393 1.0699224556073976 0.9787397516457825 1.1787228215196406 1.0 9.825385900315768 -6.262914182333342 24.741561619316855 0.976770168001286 1.1859759356199486 0.44280694649297536 0.10224160417041257 60.48607688949737 1014741.3577441978 0.011223015155559835 0.027453794325794405 5.458657148538165e-07 6.262914182333342 0.2092057676186626 RLES(ph)SGAGGR ddPTM_A549_PD325901_60min_R1 1 RLESSGAGGR 10 1 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 RLES(0.994)S(0.006)GAGGR 86.911 0.00059135 7474200.0 1195.0 1492.9 1166.3 1202.8 1481.0 1163.6 1256.9 1320.4 1367.8 1168.7 1556.4 True False 1316.3155202874964 1618.7119223330064 1245.4521315316426 1277.0942242430028 1376.9796691726335 1154.12402739035 1304.7320173020717 1294.063586166239 1310.3161226526272 1094.90808254841 1364.972666832492 0.9643530249892053 1.185893286851914 0.912437414898421 0.9356188993927499 1.008796514854766 0.8455290391041822 0.9558667722847427 0.9480509153118779 0.9599577738749165 0.8021465258269351 1.0 10.414656346561769 -5.7822407744825775 24.999998198711843 0.9632000125872486 1.0751233058349299 0.2556642549894107 0.08056019732368407 170.4540198001958 204859.30832877007 0.008290850620633707 0.02581703566386877 1.6510461982685336e-06 5.7822407744825775 0.11192329324768124 RLES(ph)VSR ddPTM_A549_MK2206_60min_R1 2 RLESVSR 7 1 O15438-2;O15438;O15438-4;H0Y8Q6;I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 O15438-2;I3L4X2 ABCC3;ABCC1 Canalicular multispecific organic anion transporter 2;Multidrug resistance-associated protein 1 1 RLES(0.996)VS(0.004)R;RLES(0.996)VS(0.004)R 85.53299999999999 0.0056718 27037000.0 1305.88 1083.42 1178.99 652.17 1413.2800000000002 1091.12 969.46 1091.74 1444.47 1164.28 1491.08 True False 1526.2806182993127 1138.5614503390282 1346.1885103397658 811.9516792770243 1205.3883841606953 1206.5815941731628 1145.5983331065004 1246.497488313527 1117.2998513446014 901.2683393724226 1120.80368428553 1.3617733771746645 1.0158437791581834 1.201092153081126 0.7244370184191649 1.0754678995627007 1.0765325017131016 1.0221222049575758 1.1121461374461148 0.9968738210000068 0.8041268529081854 1.0 10.130317887952206 -3.8501748274100334 1.2547246255764934 1.0084668653714368 11.155568278176444 0.39298957325803585 0.12794346659717803 28.42413503010881 1.8796925911825708 0.014614657730054438 757.9614509696884 0.0001411969035024026 3.8501748274100334 10.147101412805007 RLES(ph)VSR ddPTM_A549_PD325901_60min_R1 2 RLESVSR 7 1 O15438-2;O15438;O15438-4;H0Y8Q6;I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9;A0A0A0MS99 O15438-2;I3L4X2 ABCC3;ABCC1 Canalicular multispecific organic anion transporter 2;Multidrug resistance-associated protein 1 1 RLES(1)VSR;RLES(0.98)VS(0.02)R 114.97 0.0030596 26109000.0 2828.1 2766.1000000000004 2340.7 3130.0 2836.2 2660.3 3091.0 2572.2 2779.6000000000004 3040.3 2872.1 True False 3115.2066300628176 2999.2089546287957 2499.55397777254 3323.332991254238 2636.9950963588294 2638.635398819653 3208.6296964601 2520.8954531481363 2662.7830783193767 2848.3349391391544 2518.8499077419688 1.2367575457703452 1.1907057047783551 0.9923393887384394 1.3193850816754107 1.046904417866951 1.0475556287452896 1.273847118320951 1.0008120949961647 1.0571424165191476 1.1308077271235877 1.0 11.298549442539052 -2.0000000013635204 0.07826529851549374 0.8747638988580364 1.744111883425478 0.09895338839716472 0.10768528743815645 150.70782473608148 0.8372713963056069 1.4144868965120299 14.212386123620536 0.009999999968603783 2.0000000013635204 0.8693479845674417 RLET(ph)MER ddPTM_A549_MK2206_60min_R1 1 RLETMER 7 1 O14578-4 O14578-4 CIT Citron Rho-interacting kinase 1 RLET(1)MER 59.426 0.018736000000000003 2262200.0 467.01 376.7 297.05 344.34 462.11 353.31 350.26 362.81 561.38 612.75 682.21 True False 545.8298707017198 395.87242098420893 339.1761567073742 428.70331545801014 394.1342311534156 390.6970296918028 413.8977081611237 414.2394285590259 434.2283263396484 474.3293494266427 512.7984289618473 1.0644140852902848 0.7719844652910631 0.6614219887413291 0.8360074665710532 0.7685948491521989 0.7618920176545062 0.8071352890044016 0.8078016724771317 0.8467817017667879 0.9249820643696497 1.0 9.002248031816356 -10.080994566562325 0.6191515720033557 1.0013140733452979 0.7995898078296727 0.25769864631046446 0.09476089919079286 0.6093365330584114 0.4501290263906879 0.059505760238004475 0.02058428130408283 8.298611498029819e-11 10.080994566562325 -0.20172426551562517 RLET(ph)PEPGQQGLQAAAR ddPTM_A549_MK2206_60min_R1 1 RLETPEPGQQGLQAAAR 17 1 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6 I3L419 FAM64A Protein FAM64A 1 RLET(1)PEPGQQGLQAAAR 77.469 0.00024318 15706000.0 2020.2 2600.2 2005.8 1831.0 2734.4 1962.8 1726.1 2097.6 3475.1 3447.1 3476.3 True False 2361.1603708520474 2732.5390736478375 2290.2526009885587 2279.595082196713 2332.1733822377764 2170.5021931988085 2039.710026999701 2394.941223630584 2687.995398594378 2668.3977158850776 2613.038769000849 0.9036070948747873 1.0457323121511444 0.8764709609969873 0.8723923690838942 0.8925138845641899 0.8306429353242035 0.7805892706978962 0.9165348987708823 1.0286856170994318 1.0211856584528964 1.0 11.351512814383296 -8.67325123053371 4.995105314168106 1.0134758166406215 0.886934628924923 0.4649944266852508 0.06106332535406257 0.1425329284791663 6.099475437573663 0.011048460188221877 0.012479791019500244 2.1220165634108384e-09 8.67325123053371 -0.12654118771569844 RLEVLDSTK ddPTM_A549_PD325901_60min_R1 2 RLEVLDSTK 9 1 P47985;P0C7P4 P47985 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 0 ; 83.86200000000001 0.0014135999999999999 4593300.0 1766.73 1332.22 1512.44 1698.49 1921.73 1558.26 1758.73 1846.7799999999997 1416.92 1985.69 1857.37 False True 1946.0871290021141 1444.4908548264975 1615.083273440552 1803.401869749333 1786.754314408593 1545.5700471994571 1825.6594325639837 1809.9445241291169 1357.3717798720295 1860.3131945200255 1628.925264838514 1.1947062096768708 0.8867754009387897 0.9915023778581183 1.1071114855156452 1.096891522881331 0.9488280896377892 1.1207754413122035 1.1111280322050554 0.8332928521472681 1.142049444916953 1.0 10.669704699133122 -8.753896745687657 24.998162704133183 0.9212771787420173 1.0508346655371563 0.0 0.11202045359884795 168.55024733542194 558617.1591024149 0.016554443526649427 0.018594389667090257 1.7623950092620061e-09 8.753896745687657 0.129557486795139 RLFDANK ddPTM_A549_PD325901_60min_R1 1 RLFDANK 7 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;K7ENA0;A0A0J9YXM3;A0A0J9YXH9;K7EIL4;A0A0J9YYI8 P06744-2 GPI Glucose-6-phosphate isomerase 0 51.335 0.050517 3604400.0 1815.4 1551.8 1637.0 1781.7 2497.7 2671.8 1952.1 1996.5 2681.2 2558.3 2228.4 False True 1999.6980715731538 1682.5756320425735 1748.0966640806798 1891.7515624657126 2322.270168597223 2650.0417466324657 2026.3882337301072 1956.678241276048 2568.518488124158 2396.76850139779 1954.3209269914696 1.023218880765678 0.8609515503847018 0.8944777901814435 0.9679840891730725 1.1882747283334798 1.3559910811127658 1.0368758814088839 1.0012062063359304 1.3142767150726875 1.226394533413422 1.0 10.932451682245489 -6.668757511142531 4.920707875062414 1.1498282282433707 0.9221500443440112 0.46021906278719016 0.11655437816192274 0.18021323211916312 7.370921537404227 0.02014995691893287 0.04253639545729411 2.1440874208113532e-07 6.668757511142531 -0.22767818389935957 RLFDDEAS(ph)VDEPR ddPTM_A549_MK2206_60min_R1 3 RLFDDEASVDEPR 13 1 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46;Q8NI35-5 A0A2R8Y549 INADL InaD-like protein 1 RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR 207.72 8.809100000000001e-33 29035000.0 3152.0299999999997 2972.25 2766.11 2830.96 3317.13 2814.1099999999997 2919.2200000000003 3134.7799999999997 4853.67 4143.84 4497.72 True False 3684.0156042653075 3123.524829493803 3158.385991684347 3524.545327086622 2829.18457117554 3111.8972523449656 3449.6044870042692 3579.144664861118 3754.3214947183033 3207.7436659781292 3380.811993242959 1.089683665234371 0.9238978197357967 0.9342092958723637 1.0425144415397647 0.8368358183862556 0.9204585343889402 1.0203479205287966 1.0586642120338414 1.1104792287242997 0.9488086508179894 1.0 11.723154074937264 -7.941030335225843 4.828476081974059 1.0536061740775589 0.953951255020791 0.15389926837468326 0.07359649650612168 0.19366409043749566 9.293267278446688 0.011130658448835448 0.015422712117546207 1.1454329308037976e-08 7.941030335225843 -0.09965491905676782 RLFDDEAS(ph)VDEPR ddPTM_A549_PD325901_60min_R1 4 RLFDDEASVDEPR 13 1 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46;Q8NI35-5 A0A2R8Y549 INADL InaD-like protein 1 RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR 198.16 1.6384999999999998e-30 85675000.0 7295.9400000000005 8989.1 7702.799999999999 8693.7 9220.5 9726.099999999999 9421.0 9151.3 9108.37 9439.699999999999 10489.199999999999 True False 8036.618457812848 9746.643004249197 8225.558328699246 9230.690104174759 8572.883888998163 9646.893866278171 9779.521310369017 8968.770142444026 8725.576884109892 8843.675731010715 9199.094896517201 0.8736314331158308 1.0595219544848156 0.8941703962433806 1.0034345996006107 0.9319268890512128 1.0486785901002618 1.0630960350318341 0.974962237408772 0.9485255867306485 0.9613636809376704 1.0 13.167276205337977 RLGDS(ph)SGPALK ddPTM_A549_MK2206_60min_R1 2 RLGDSSGPALK 11 1 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 RLGDS(0.979)S(0.021)GPALK;RLGDS(0.7)S(0.3)GPALK 57.136 0.0057841 8823000.0 2959.7 4411.0 3437.6000000000004 2988.8 4676.8 3700.5 3271.8 3887.0 4788.0 5102.1 5780.299999999999 True False 3459.22500228235 4635.501059095689 3925.1033708038035 3721.0561341723305 3988.848915319496 4092.084453806901 3866.2437091348256 4437.994153438255 3703.5256448648656 3949.5320664376572 4344.891981835747 0.7961590338134951 1.0668852248743725 0.9033834183250328 0.8564208614917415 0.9180547944564043 0.9418150027467349 0.8898365541187311 1.0214279600026264 0.8523861261333591 0.9090058125608343 1.0 12.085104595371035 RLGDS(ph)SGPALKR ddPTM_A549_PD325901_60min_R1 1 RLGDSSGPALKR 12 2 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 RLGDS(0.953)S(0.047)GPALKR 42.568000000000005 0.026843000000000002 5328300.0 2099.6 1739.5 2007.5 2054.9 2450.2 2331.2 2245.2 2367.0 2252.0 2394.1 2815.7 True False 2312.7498463561724 1886.0937697757813 2143.7410220781726 2181.8265059834957 2278.1064047311193 2312.2154801068973 2330.6423146205825 2319.7883281244212 2157.3562715409544 2242.9361174203386 2469.386750192911 0.9365685007322153 0.763790349822051 0.8681268828832508 0.8835499363609403 0.9225393327121202 0.9363521043944472 0.9438142139697275 0.9394187961619203 0.8736404985458107 0.9082968138729658 1.0 11.269937090721408 -14.999999999999998 0.16923306701652824 1.407985676554775 0.8631849121805424 0.125672541960704 0.054022506137524934 42.939777929690095 0.4594232766165502 5.907655562673902 0.06898194682481637 1.000000000000004e-15 14.999999999999998 -0.5448007643742325 RLGDS(ph)SLSR ddPTM_A549_MK2206_60min_R1 3 RLGDSSLSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RLGDS(0.54)S(0.46)LSR;RLGDS(0.5)S(0.5)LS(0.001)R;RLGDS(0.497)S(0.497)LS(0.005)R 96.103 0.00037678 266540300.0 2350.2200000000003 2326.6099999999997 2021.75 1955.35 3073.33 2298.04 1667.73 1966.1299999999999 3499.79 3196.69 3470.09 True False 2746.8796786377097 2445.0245112452103 2308.4645508269114 2434.410837778997 2621.2472282156323 2541.2170674845065 1970.734953553219 2244.834948520595 2707.0931530162056 2474.5555088023757 2608.370883388132 1.0531016490529377 0.9373760943341218 0.8850215916489381 0.9333070129263327 1.0049365467577889 0.9742544987251214 0.7555424598948679 0.860627207126571 1.0378482485971623 0.9486977195467167 1.0 11.348933305144488 -8.77844537495278 24.979890651908942 1.0178727918348347 0.9234313078736401 0.12272175026037524 0.07713180775957496 252.41626280909892 370769.6626669142 0.013370116497218506 0.01425109928079241 1.6655383040525143e-09 8.77844537495278 -0.09444148396119456 RLGDS(ph)SLSR ddPTM_A549_PD325901_60min_R1 1 RLGDSSLSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RLGDS(0.49)S(0.49)LS(0.02)R 103.43 0.00027241 156630000.0 2709.3 3029.3 2812.1 2297.7 2879.2 2720.5 3111.9 3040.4 2876.4 3386.4 3504.1 True False 2984.3461415187558 3284.5897423292768 3002.9460165310215 2439.6237105446844 2676.974924700776 2698.3451499789016 3230.3250573970217 2979.756836852341 2755.514910950445 3172.5821260733624 3073.1179143200566 0.9711134504837436 1.068813444164901 0.9771658947865133 0.7938594543270117 0.8710941133194593 0.8780480362973396 1.0511555844780358 0.9696200796485311 0.8966512147517506 1.0323658950051426 1.0 11.585487408293627 -11.090592408469757 1.4211465884318133 0.9999840457468362 0.9365455328341685 0.10894813838098527 0.07716384022921158 0.9818940833753649 3.5442884683461857 0.058797988659988684 0.012883530242156516 8.117225135699394e-12 11.090592408469757 -0.06343851291266767 RLGDSS(ph)LSR ddPTM_A549_MK2206_60min_R1 2 RLGDSSLSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RLGDS(0.054)S(0.924)LS(0.022)R;RLGDS(0.053)S(0.942)LS(0.005)R 102.46 0.0005556 228200000.0 10788.2 10960.400000000001 8323.9 8456.5 12633.5 9039.3 7592.0 8089.3 11665.5 16223.5 17207.9 True False 12608.984413833308 11518.237544346488 9504.354185546243 10528.342879626705 10775.128885496253 9995.832726198274 8971.368127560247 9235.983047442267 9023.282875975574 12558.600082289904 12934.703516120504 0.9748182011376408 0.8904910367671994 0.7347949006872078 0.8139608972486494 0.8330402681489548 0.772791793313274 0.6935890039055972 0.7140467530571128 0.6976026056360602 0.9709229180737028 1.0 13.65895936509705 -10.924044167243732 1.2026731487317173 0.9989818599172468 0.7813461760544076 0.4446730368112344 0.08269932903334459 0.34611575284926516 0.8961418555329954 0.061346894784092505 0.0147656833250715 1.1911208662606466e-11 10.924044167243732 -0.21763568386283916 RLGDSS(ph)LSR ddPTM_A549_PD325901_60min_R1 3 RLGDSSLSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RLGDS(0.136)S(0.863)LS(0.001)R;RLGDS(0.132)S(0.867)LS(0.001)R;RLGDS(0.464)S(0.534)LS(0.002)R 85.845 0.00051896 416950000.0 15717.6 16229.399999999998 14770.3 16236.9 16476.5 16407.800000000003 14468.3 15656.9 16141.0 18552.9 19162.3 True False 17313.239181314424 17597.10849508424 15772.70137902925 17239.816436324592 15319.247480839238 16274.180316788756 15018.899073857552 15344.610846899557 15462.649901839492 17381.466727742285 16805.458579827977 1.0302152184109958 1.0471067130656286 0.9385463243449736 1.0258462364733079 0.9115637879246761 0.9683865655604943 0.8936917134701176 0.9130730217215308 0.9200968737859797 1.0342750627826192 1.0 14.036642290348711 -5.753037609003826 1.1916452560268986 0.9516337065419483 1.0537606278593081 0.2755536642054972 0.0470879958717124 0.7014301502687887 1.3793027385112495 0.006681728455509865 0.07101263683926741 1.7658848920855606e-06 5.753037609003826 0.10212692131735979 RLGGLRPES(ph)PESLTSVSR ddPTM_A549_MK2206_60min_R1 5 RLGGLRPESPESLTSVSR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RLGGLRPES(0.962)PES(0.027)LT(0.011)S(0.001)VSR;RLGGLRPES(0.974)PES(0.026)LT(0.001)SVSR;RLGGLRPES(0.808)PES(0.134)LT(0.054)S(0.004)VSR;RLGGLRPES(0.654)PES(0.346)LTSVSR;RLGGLRPES(0.959)PES(0.01)LT(0.014)S(0.017)VS(0.001)R 113.36 2.6325e-10 861692000.0 8177.580000000001 10347.74 8082.93 8656.11 11589.0 8259.99 7976.0 8033.030000000001 13275.51 12940.329999999998 14843.22 True False 9557.75558136436 10874.395767228927 9229.211016107509 10776.857338587548 9884.273451855468 9134.05665926239 9425.135956983731 9171.73660262262 10268.628181633232 10017.100465550502 11157.238821968413 0.8566416596322471 0.9746493680692241 0.8271948968176024 0.9659072025390457 0.8859067740302827 0.8186664106604574 0.8447552398381757 0.822043585242939 0.9203556852627801 0.8978117816952168 1.0 13.445692414715408 -9.679874748459351 1.0472658731805697 0.9856854980175556 0.8784808550047039 0.12712891576346352 0.058267583710485384 0.3107278131497694 0.7043108269156337 0.015594527100124945 0.010340424954399048 2.0898987756249168e-10 9.679874748459351 -0.10720464301285171 RLGGLRPES(ph)PESLTSVSR ddPTM_A549_PD325901_60min_R1 4 RLGGLRPESPESLTSVSR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RLGGLRPES(0.999)PES(0.001)LTSVSR;RLGGLRPES(1)PESLTSVSR;RLGGLRPES(0.957)PES(0.04)LT(0.003)S(0.001)VSR;RLGGLRPES(1)PESLTSVSR 167.45 7.6838e-31 1563950000.0 8532.0 7902.39 7048.66 7411.5199999999995 8814.94 8189.870000000001 7264.53 7246.2 9035.79 8911.28 10123.04 True False 9398.162359073574 8568.352138740114 7527.02445463588 7869.312757616812 8195.809024292115 8123.174414062748 7540.985664453343 7101.668856466067 8656.047169106143 8348.62025999144 8877.970255237715 1.0585935848939079 0.9651251234689668 0.8478316820441226 0.8863864747659154 0.9231624784343981 0.9149810351381092 0.849404249806357 0.7999203255131783 0.9750029477739414 0.9403748852465488 1.0 13.11601415972598 -8.971465536090253 24.943973778338105 0.9889719584713806 0.9030633939911739 0.155050041525707 0.06600072527861428 178.5616985697959 156094.61468077436 0.011513359531262536 0.012076927157517323 1.0679095342962604e-09 8.971465536090253 -0.08590856448020678 RLGGPPKS(ph)GEP ddPTM_A549_PD325901_60min_R1 1 RLGGPPKSGEP 11 2 Q9BUL5-4;Q9BUL5;I3L1N0;Q9BUL5-3 Q9BUL5-4 PHF23 PHD finger protein 23 1 RLGGPPKS(1)GEP 56.138999999999996 0.0051589 15386000.0 2558.6 2328.5 3102.3 3192.1 3083.8 3705.5 2934.4 2903.4 4696.0 3206.0 3507.3 True False 2818.347188458231 2524.7308668714622 3312.840733645386 3389.2687672149086 2867.2045265324577 3675.3236365546113 3046.070197765293 2845.489409326763 4498.643450779893 3003.5726128606157 3075.924334606526 0.9162602463102382 0.8208039575181642 1.0770228306247223 1.1018700067108333 0.9321440369238576 1.1948680255897 0.9902942551267108 0.9250843323136425 1.462533847197305 0.9764780554151162 1.0 11.586804299200262 -6.769782987439411 0.565575374978719 1.1940237374638818 0.8782808764856421 0.0021527574868202004 0.16602321237832904 1.3957187953572074 0.7077946242881582 0.041889336618774586 0.21386955745308328 1.6990924596930814e-07 6.769782987439411 -0.31574286097823967 RLGRGS(ph)VSDCSDGTSELEEPLGEDPR ddPTM_A549_MK2206_60min_R1 3 RLGRGSVSDCSDGTSELEEPLGEDPR 26 2 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 RLGRGS(0.628)VS(0.155)DCS(0.217)DGTSELEEPLGEDPR;RLGRGS(0.952)VS(0.048)DCSDGTSELEEPLGEDPR;RLGRGS(0.489)VS(0.489)DCS(0.006)DGT(0.008)S(0.008)ELEEPLGEDPR 165.53 6.280099999999999e-42 25469200.0 3007.4300000000003 3545.0 2741.48 2371.17 3729.2 2779.04 2577.9700000000003 2529.29 4300.700000000001 4179.4 3922.7 True False 3515.010659395887 3725.4253580807544 3130.2630873258117 2952.1067564458654 3180.6396200413674 3073.1161682225484 3046.3537792158168 2887.8246031257636 3326.598316806665 3235.2706372806383 2948.58532898761 1.1921007083769077 1.2634619461258294 1.0616152283442923 1.0011942769380409 1.078700212190716 1.0422340971484436 1.03315774831647 0.9793932618247448 1.128201474823469 1.0972280861179828 1.0 11.525807229517525 -5.7718524341717075 22.54500254299109 1.0505197921860754 1.2277813084776796 0.7075072616751424 0.04481669889505829 25.289656754971254 54756.09244922642 0.007255889341996744 0.0229995143184603 1.6910154121192938e-06 5.7718524341717075 0.17726151629160425 RLGRGSVSDCS(ph)DGTSELEEPLGEDPR ddPTM_A549_MK2206_60min_R1 1 RLGRGSVSDCSDGTSELEEPLGEDPR 26 2 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 RLGRGS(0.186)VS(0.057)DCS(0.73)DGT(0.013)S(0.013)ELEEPLGEDPR 83.26 6.903e-07 8023200.0 1344.9 1822.2 1458.3 1228.5 1638.1 1751.8 1270.0 1292.3 1926.9 2389.2 1622.4 True False 1571.8862403519045 1914.9421967545143 1665.1088682927589 1529.4825551494605 1397.1376599779492 1937.174313249271 1500.7425608537294 1475.4874825027678 1490.4602266270067 1849.4780606285353 1219.5133040379073 1.288945545036091 1.570251173491905 1.3653880304375923 1.2541745547877337 1.1456518394280022 1.5884814924405746 1.2306077808947629 1.2098986354780297 1.2221762744957125 1.5165706306809148 1.0 10.252089781676723 -11.260168063564047 0.14809740306612298 0.6099296369599777 1.499775490127033 0.0 0.20050990135219365 10.142721938767501 0.31468517663624646 1.865230037839168 0.3759780023648658 5.493282533117465e-12 11.260168063564047 0.8898458531670553 RLGS(ph)LVDEFK ddPTM_A549_PD325901_60min_R1 1 RLGSLVDEFK 10 1 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 RLGS(1)LVDEFK 52.343999999999994 0.0097725 1219400.0 343.78 306.07 178.64 284.15 173.58 210.98 336.93 277.92 319.77 268.54 193.97 True False 378.68029252253984 331.86359305275846 190.7635846495863 301.7013001485279 161.38833961849144 209.26184883019602 349.75205552517053 272.3766675759778 306.3311789301291 251.58433857067678 170.11291967713854 2.226052514066812 1.9508429676159251 1.1213938659782055 1.7735354887867079 0.9487130073647217 1.2301349552247953 2.055999369060113 1.6011521528930792 1.8007519917447925 1.4789255222246778 1.0 7.410348904240571 -10.854768761540893 1.0639741345627862 0.9945850600284601 1.6242480498414813 0.08455335780796203 0.4020809277821508 0.5852442514431753 1.1596075217077237 0.2781098535102107 0.06543158479113907 1.3971120500935343e-11 10.854768761540893 0.6296629898130212 RLGS(ph)VEAPK ddPTM_A549_MK2206_60min_R1 3 RLGSVEAPK 9 1 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 RLGS(1)VEAPK;RLGS(1)VEAPK;RLGS(1)VEAPK 90.79299999999999 0.00043987 60035000.0 9743.0 9693.7 7953.6 8166.299999999999 10220.7 8249.3 7855.5 8134.799999999999 10787.5 11689.2 11003.0 True False 11387.380206519903 10187.067924859635 9081.540077386882 10167.043866599137 8717.248569279425 9122.235450557835 9282.742666760996 9287.932811780167 8344.14847409768 9048.601601498029 8270.651432648603 1.3768419935542122 1.231712883539733 1.098044108295663 1.229291785464985 1.0539978187048082 1.1029645638972987 1.1223714047622824 1.1229989423947695 1.0088864876059151 1.0940615349570226 1.0 13.013785251499813 -2.0000000000000004 0.23102498889600637 0.9900527712768087 2.9466270919847357 0.653807810286072 0.061867736539077 14.921350019755337 0.17659102615175587 0.030439432106796567 11.222986446841677 0.00999999999999999 2.0000000000000004 1.9565743207079271 RLGS(ph)VEAPK ddPTM_A549_PD325901_60min_R1 2 RLGSVEAPK 9 1 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 RLGS(1)VEAPK;RLGS(1)VEAPK 98.902 0.00034352 98982000.0 7641.5 8733.1 8258.2 8296.7 8966.6 8446.900000000001 7697.5 8668.599999999999 8301.5 10241.8 10290.2 True False 8417.25945462502 9469.068985817115 8818.65111259076 8809.168315827175 8336.816949090711 8378.111246960769 7990.432574733621 8495.697972614851 7952.616824243887 9595.131000123481 9024.570634952259 0.9327047008779437 1.0492542381067205 0.9771823468737704 0.9761315714798854 0.9237909797948869 0.9283667429575269 0.8854086136559882 0.9413963629151421 0.8812183034440793 1.0632229928991233 1.0 13.139642578705043 -6.6067616658954655 3.622590140010043 0.9356763896666849 0.991045767381965 0.07746416528673905 0.05490909134905871 0.29635338868121724 7.652436975739929 0.007213469760473216 0.015926211816239773 2.4730809613200975e-07 6.6067616658954655 0.055369377715280166 RLHDEKEETAGSYDSR ddPTM_A549_MK2206_60min_R1 1 RLHDEKEETAGSYDSR 16 2 A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;A0A2R8Y5N1;H9KV28;A0A2R8YEF8 A0A140T8Z0 DIAPH1 Protein diaphanous homolog 1 0 67.605 0.00065064 1720400.0 397.73 291.94 363.28 325.85 351.12 272.12 384.18 279.3 619.47 573.74 742.69 False True 464.85710043509795 306.7984990234403 414.7985666004206 405.6832646279626 299.4707131258514 300.91555778136325 453.9805330935316 318.89163032037663 479.1610340903166 444.1317355202647 558.2595757987633 0.8326898822469383 0.5495624478710821 0.7430209611844503 0.7266928902160021 0.536436321217358 0.5390244445888999 0.8132068893649909 0.5712246491501796 0.8583122526912831 0.7955649213626057 1.0 9.124792282511061 -9.106955880317338 1.2264165861951 0.9611615457042324 0.6580064541647636 0.3535928825741089 0.11940980490327797 0.1918183590285092 0.5945002787470707 0.023523849681567788 0.021567605552600868 7.81707213661797e-10 9.106955880317338 -0.30315509153946885 RLHPPS(ph)PVPQGVCPAHR ddPTM_A549_MK2206_60min_R1 1 RLHPPSPVPQGVCPAHR 17 1 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 RLHPPS(1)PVPQGVCPAHR 60.56100000000001 0.00079434 3516100.0 1089.5 1327.3 1341.0 1192.9 1720.4 1079.2 1404.5 1232.3 2126.5 1492.3 1926.9 True False 1273.380964282401 1394.8539006433246 1531.1739644658778 1485.1605535513154 1467.3314390000999 1193.4002276850176 1659.679469857528 1406.9822987604741 1644.85114532271 1155.1883935526382 1448.397550265437 0.8791653673047417 0.9630324908984416 1.0571503412065775 1.0253818458054842 1.0130723009930478 0.8239452127396322 1.1458728783084249 0.9714061574480204 1.1356351334764894 0.7975630677785498 1.0 10.500241926501205 -7.790370149343547 24.999942406582004 1.062833514741826 0.9701761361763255 0.0 0.11161657835054564 239.9447577782789 207342.60767499244 0.012931100550928505 0.017868437713958907 1.620428416915084e-08 7.790370149343547 -0.09265737856550049 RLHPPS(ph)PVPQGVCPAHR ddPTM_A549_PD325901_60min_R1 1 RLHPPSPVPQGVCPAHR 17 1 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 RLHPPS(1)PVPQGVCPAHR 68.49 0.00037879 4108800.0 1615.8 1696.6 1620.8 1548.0 2101.6 1929.0 1966.7 2227.4 1955.8 2080.7 2157.1 True False 1779.834826510908 1839.5784362182178 1730.7972346621668 1643.6164442369209 1953.9908661264053 1913.2908635579113 2041.543844719535 2182.972759638503 1873.6045274777089 1949.3242469055165 1891.7903749835316 0.9408203202886058 0.9724007799935189 0.9148990594041022 0.8688153116601139 1.032879166722378 1.0113651538028186 1.0791596530547456 1.1539189481590981 0.9903869647788112 1.0304123927697253 1.0 10.88553652041836 -6.779266815485135 24.999911567350487 1.01737265824824 0.9270075812646219 0.5119155450576309 0.051982023901654684 201.99979982217167 283269.7050127572 0.00843241819334202 0.015959603984715045 1.6623910211195826e-07 6.779266815485135 -0.09036507698361818 RLIS(ph)PYK ddPTM_A549_MK2206_60min_R1 2 RLISPYK 7 1 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 RLIS(0.969)PY(0.031)K;RLIS(1)PYK 111.46 0.0033902999999999997 54540000.0 5375.4 5930.4 4919.4 5190.1 7379.200000000001 5630.6 4828.1 5306.9 7069.5 6996.0 6767.9 True False 6282.636104087759 6232.232029213575 5617.04489246341 6461.67473299244 6293.729455167131 6226.426354710216 5705.30327406133 6059.169326699633 5468.269537671714 5415.598741066983 5087.243645462375 1.234978416984535 1.2250704828679644 1.1041430849245049 1.2701720584497667 1.237159038132741 1.2239292608412708 1.1214920439578788 1.1910515298602178 1.0748982983249091 1.0645447944875783 1.0 12.312668476107126 -8.86879656476579 0.7378685336279527 1.0139292791470909 1.2150480464436426 0.6663203591905351 0.04912063845262871 0.1973999360995468 0.22693755207330604 0.012797308137939731 0.01221567836663148 1.3527060587661915e-09 8.86879656476579 0.20111876729655176 RLIS(ph)PYK ddPTM_A549_PD325901_60min_R1 2 RLISPYK 7 1 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 RLIS(1)PYK;RLIS(1)PYK 100.02 0.0047322 87094000.0 13577.6 12545.7 12874.3 12710.3 15217.6 13013.1 12644.9 12540.2 15861.2 14825.6 14948.900000000001 True False 14955.987956699166 13602.970168137972 13748.027417455045 13495.386363814307 14148.768273869997 12907.125628079557 13126.10858905479 12290.075873403419 15194.608922808779 13889.509085847283 13110.28006888476 1.1407832539134621 1.037580440437923 1.0486448302568212 1.0293743759024292 1.0792117483020007 0.9845041875735852 1.0012073365394836 0.9374380874266774 1.158984311774609 1.0594364889894232 1.0 13.678410885069095 -11.409725434087358 2.187876032140821 0.9992838937672766 1.0640576290608523 0.0 0.065251799207699 0.6584970142842281 5.702253063007703 0.058550282770327665 0.010640953686610428 3.8929118152665735e-12 11.409725434087358 0.06477373529357577 RLIS(ph)PYKK ddPTM_A549_MK2206_60min_R1 2 RLISPYKK 8 2 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 RLIS(0.997)PY(0.003)KK;RLIS(0.961)PY(0.039)KK 72.006 0.0012035 47276000.0 5162.4 5619.0 5640.1 4931.200000000001 7729.9 5655.6 5442.5 5328.7 7382.0 7142.299999999999 6893.6 True False 6033.6869114377805 5904.983099310516 6439.950989548099 6139.344221369978 6592.841949736609 6254.071838116555 6431.33180113891 6084.0595434593315 5709.988786631669 5528.849469457216 5181.728866318863 1.1644157899994785 1.1395777841046049 1.2428189810176398 1.184806148634213 1.2723247626076992 1.206946947527089 1.2411556001979267 1.1741369918070397 1.1019466540880758 1.066989341220578 1.0 12.339217813215445 -9.188743904702365 0.8996594007151822 1.0221501554048058 1.20932590745791 0.7244833379480906 0.04097341462512932 0.15787204801630453 0.2701873878986356 0.011243525681955992 0.009326777648109722 6.475243361279422e-10 9.188743904702365 0.1871757520531041 RLIS(ph)PYKK ddPTM_A549_PD325901_60min_R1 2 RLISPYKK 8 2 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 RLIS(0.993)PY(0.007)KK;RLIS(0.993)PY(0.007)KK 78.655 0.00087103 68008000.0 8566.1 9150.4 8547.8 9393.0 9911.9 10808.3 10218.900000000001 10663.6 10519.599999999999 10675.0 10440.3 True False 9435.72416597048 9921.536321331592 9127.905110097036 9973.184276949229 9215.722338198668 10720.280788280439 10607.785831496652 10450.90613256763 10077.497794894416 10000.978678193107 9156.20928651456 1.0305273580702872 1.0835855768330045 0.9969087451442147 1.0892263342689124 1.0064997478565458 1.1708208553150345 1.1585346620593309 1.1414009668782827 1.1006189875690966 1.0922619137728469 1.0 13.160534724091939 -5.242441860714275 21.4501894033972 1.0674291189101617 1.0305271367759214 0.0 0.060414092918126425 2186.621273601189 2468631.9146308033 0.009324198741794897 0.3496906748809043 5.722135521268002e-06 5.242441860714275 -0.03690198213424023 RLKEDILENEDEQNS(ph)PPK ddPTM_A549_MK2206_60min_R1 3 RLKEDILENEDEQNSPPK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK 156.67 2.851e-23 69546700.0 6897.1 7375.9 6933.4 5829.1 9562.3 7180.7 6616.7 7790.5 11814.599999999999 10199.300000000001 11099.3 True False 8061.161862094667 7751.301804983874 7916.6603767544475 7257.229761678244 8155.698337102215 7940.556907837106 7818.868742047923 8894.827232405643 9138.611964039352 7895.271046278515 8343.037484903809 0.9662142686858141 0.9290743112456773 0.9488942595642338 0.8698546272637198 0.9775454505459706 0.9517585078821753 0.9371729128864235 1.0661377524073532 1.0953578934021433 0.9463305253709458 1.0 13.026357012048347 -8.256134964691359 24.680418755030086 1.0478713840784475 0.9391796179044899 0.4362923518065681 0.045285313726741584 188.32506136266963 876240.5941039945 0.006804678465143395 0.008651770092793495 5.544533799874209e-09 8.256134964691359 -0.1086917661739576 RLKEDILENEDEQNS(ph)PPK ddPTM_A549_PD325901_60min_R1 4 RLKEDILENEDEQNSPPK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK 143.15 2.2479000000000002e-17 123700600.0 13729.7 15220.599999999999 15959.2 13766.4 15773.399999999998 15145.099999999999 16196.3 16120.5 16225.6 15550.8 17403.9 True False 15123.52903672906 16503.293378700335 17042.287282465735 14616.719262237175 14665.530799275904 15021.763326941893 16812.659059455436 15798.963981212399 15543.694458043916 14568.919834083874 15263.330632411975 0.9908406887690657 1.0812380191552213 1.116551013202591 0.9576362862243377 0.9608342472863275 0.9841733556529851 1.1015065757504743 1.0350928222483105 1.0183684565566957 0.9545046349940487 1.0 13.897782188547799 -11.32542463185242 0.0044471013935439875 3.8166068725942736e-05 2.011213799596398 0.07751436228257824 0.0534962403455985 55373.30192634562 44.29635849079898 10297.109451010425 9740.946589170135 4.726888609493606e-12 11.32542463185242 2.0111756335276723 RLKEDILENEDEQNS(ph)PPKK ddPTM_A549_MK2206_60min_R1 5 RLKEDILENEDEQNSPPKK 19 3 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK 155.76 3.4494999999999996e-27 49892300.0 6969.0 7701.700000000001 9417.1 8248.2 11399.900000000001 9700.8 9432.4 8334.300000000001 13243.099999999999 10933.4 12581.400000000001 True False 8145.196824308443 8093.6836333795645 10752.586383871449 10269.009370275764 9722.98981135622 10727.332217130122 11146.144985036777 9515.7125477233 10243.558994885097 8463.53734642392 9457.091151024742 0.8612792976438483 0.8558322537160443 1.1369866497169514 1.085852849072206 1.0281163262662076 1.1343162549477743 1.1786018350715604 1.006198671003843 1.0831617070514474 0.8949408661993108 1.0 13.207180786691275 -5.748179876724039 24.999010914308084 1.0606702388787639 0.858555617763601 0.5214738740042606 0.07476307228539349 112.29535276660322 211713.98137123082 0.008453917439476257 0.03235136918244289 1.7857477980255453e-06 5.748179876724039 -0.20211462111516287 RLKEDILENEDEQNS(ph)PPKK ddPTM_A549_PD325901_60min_R1 4 RLKEDILENEDEQNSPPKK 19 3 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK 189.57 1.7054999999999998e-44 159987000.0 13413.7 13114.6 15104.8 14685.7 16555.1 15311.599999999999 14481.5 17847.4 15482.0 16537.2 17077.4 True False 14775.448949355972 14219.813367692695 16129.902560541144 15592.80233535539 15392.326887994514 15186.907406144803 15032.601407080869 17491.419605985557 14831.345380105266 15493.038369743792 14976.988062557955 0.9865434149803575 0.9494441277710453 1.0769790623566993 1.0411173642006801 1.0277317991909798 1.0140161254525961 1.0037132529111072 1.1678863288750032 0.9902755693037646 1.0344562140952724 1.0 13.870459900267882 -2.0039752061404164 24.549193883756164 1.0133552415187586 0.0007275045142240977 0.0 0.05637412559915614 0.0 0.0 0.007276564975788823 0.0 0.009908885130749607 2.0039752061404164 -1.0126277370045345 RLKS(ph)DERPVHIK ddPTM_A549_MK2206_60min_R1 1 RLKSDERPVHIK 12 3 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 RLKS(1)DERPVHIK 105.14 2.926e-05 18240000.0 2533.1 2167.8 2066.9 1257.7 2917.0 2346.4 2299.7 2550.0 3259.3 3583.1 3070.4 True False 2960.625351650987 2278.131760577563 2360.017499742374 1565.8365564602977 2487.913164126533 2594.6944905857367 2717.5257222010396 2911.4703090474786 2521.0737540325904 2773.6752214289745 2307.9349412709503 1.282802776936428 0.9870866460919496 1.0225667359768567 0.6784578405828076 1.0779823640767234 1.1242494076357592 1.1774706789198022 1.2615044978019048 1.0923504423587727 1.2017995706159494 1.0 11.172386840868763 -6.933540857357784 24.99999999991533 1.0798730421442155 0.979927880452124 0.10590080677406477 0.1508680275953155 112.93137625767007 42480.00943421101 0.021737647159554008 0.041080290465153095 1.1653574117180101e-07 6.933540857357784 -0.09994516169209156 RLKS(ph)EDELRPEVDEHTQK ddPTM_A549_MK2206_60min_R1 5 RLKSEDELRPEVDEHTQK 18 3 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCR2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RLKS(1)EDELRPEVDEHTQK;RLKS(1)EDELRPEVDEHTQK;RLKS(1)EDELRPEVDEHTQK;RLKS(1)EDELRPEVDEHTQK;RLKS(0.999)EDELRPEVDEHT(0.001)QK 197.28 2.6645e-49 342106300.0 22823.940000000002 20555.32 18896.77 16024.95 28101.940000000002 20789.01 21197.53 19388.370000000003 28301.12 27730.469999999998 34725.06 True False 26676.063080242 21601.497989129617 21576.616134600947 19951.063469387344 23968.181852414815 22988.889239572 25048.84681572735 22136.73082189288 21890.961507601904 21466.13756735215 26101.869239099215 1.0219981885543534 0.8275843308866063 0.8266310713977649 0.7643538202812582 0.918255379829723 0.8807372770504828 0.9596572025656119 0.8480898674005015 0.8386740929193839 0.8223984792321699 1.0 14.671865506092317 -10.843013140652442 0.9913651063356479 1.0031439493876164 0.8708757538165333 0.0 0.08502182288183294 0.5354434116417031 0.8973833903572016 0.05174592032347495 0.011520431435528257 1.4354459997316807e-11 10.843013140652442 -0.13226819557108316 RLKS(ph)EDELRPEVDEHTQK ddPTM_A549_PD325901_60min_R1 3 RLKSEDELRPEVDEHTQK 18 3 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCR2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RLKS(1)EDELRPEVDEHTQK;RLKS(1)EDELRPEVDEHTQK;RLKS(1)EDELRPEVDEHTQK 207.64 3.3274999999999996e-51 284664000.0 16291.9 16335.400000000001 15184.0 15445.199999999999 16069.6 16520.7 15974.9 21352.800000000003 29567.8 41097.6 43976.3 True False 17945.841694537125 17712.041487091294 16214.477548809451 16399.21492540574 14940.926733110447 16386.16089662063 16582.8335613007 20926.901653052453 28325.16819079424 38502.6905222397 38567.493888734054 0.46531002886291456 0.45924792360607997 0.42041823084454705 0.4252082070128003 0.3873968782160056 0.4248697347018233 0.42996917583345257 0.5426046533753496 0.7344311318882014 0.9983197413168378 1.0 15.235097782405886 -9.117934215461837 0.7264821620902148 0.9552095727843168 0.4151561242456627 0.9612168635245791 0.04350008069599551 0.08397899486450434 0.09598754100955333 0.016186412172272718 0.013176995387445803 7.621944543032833e-10 9.117934215461837 -0.5400534485386541 down RLLDDIS(ph)NGYDDSEDGGHTLGDPSYSYETTEK ddPTM_A549_PD325901_60min_R1 1 RLLDDISNGYDDSEDGGHTLGDPSYSYETTEK 32 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RLLDDIS(0.395)NGY(0.181)DDS(0.194)EDGGHT(0.194)LGDPS(0.014)Y(0.015)S(0.004)Y(0.003)ETTEK 48.909 0.0019889 5824900.0 1086.9 1214.8 1169.8 1232.4 976.76 1263.3 1296.3 1630.1 1687.3 1096.0 1351.1 True False 1197.2412878665093 1317.175459340971 1249.1896625788513 1308.5225490165258 908.1557472390696 1253.0121036457804 1345.631405862578 1597.5863767112892 1616.3886487438074 1026.7983729554703 1184.9232653285653 1.0103956288971407 1.1116124544788424 1.054236758725862 1.1043099475759621 0.7664257879072436 1.0574626562829237 1.135627466551136 1.348261464229329 1.3641293879866574 0.8665526308750053 1.0 10.210577919047697 -7.79490205343374 3.7639141161842744 1.1915083310828805 1.0142827619684731 0.10914088219414841 0.15930147668703462 0.2808754174959892 8.433742595502306 0.02589927459989545 0.03728747106265852 1.6036070118861342e-08 7.79490205343374 -0.17722556911440734 RLLDDISNGYDDS(ph)EDGGHTLGDPSYSYETTEK ddPTM_A549_PD325901_60min_R1 2 RLLDDISNGYDDSEDGGHTLGDPSYSYETTEK 32 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 RLLDDISNGYDDS(0.992)EDGGHT(0.008)LGDPSYSYETTEK;RLLDDISNGYDDS(0.999)EDGGHT(0.001)LGDPSYSYETTEK 139.85 1.7227999999999997e-31 22223900.0 2541.6 3129.8 3009.1000000000004 3486.7 3426.9 2934.2 3419.7 3716.2 3508.3 3709.6000000000004 4190.299999999999 True False 2799.621360972972 3393.5592300340536 3213.315621188256 3702.065540129764 3186.206366163202 2910.3048480309108 3549.8385548316405 3642.0774756974956 3360.858351441885 3475.375222915703 3674.919664500248 0.761818384226827 0.9234376639075574 0.8743907117831471 1.007386794299681 0.8670138824916309 0.7919369982817523 0.9659635798635567 0.9910631546262063 0.9145392711323196 0.9457010057901004 1.0 11.843496996952885 -2.0000131832764962 0.020514439515646212 1.6085148132582636 2.0602871698926058e-07 0.2599346134673429 0.06747657442852939 2133.6794938705057 3.2805225149344976 93.93008101276743 175.19141396889748 0.0099996964484479 2.0000131832764962 -1.6085146072295466 RLLEDGEDFNLGDALDS(ph)SNSMQTIQK ddPTM_A549_MK2206_60min_R1 1 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 RLLEDGEDFNLGDALDS(0.309)S(0.309)NS(0.309)MQT(0.073)IQK 56.298 0.0015489 1671100.0 325.05 488.92 425.08 425.99 609.46 466.78 423.8 403.39 673.73 828.25 543.94 True False 379.9104932904952 513.8039396538345 485.3627358800562 530.3575691234176 519.8092413467804 516.1743497765129 500.7989742439452 460.5717678300637 521.1312307257316 641.1477497553927 408.8646860197111 0.9291839238769082 1.256660105952668 1.1870986966496226 1.2971469223386278 1.271347854487293 1.2624576477891967 1.2248526012828655 1.1264650227284727 1.2745811720717015 1.5681172076682686 1.0 8.675479651258827 -10.878118557147118 1.0047343604682704 0.9936920923514962 1.214088336136445 0.0 0.19553775058077444 0.4637424888435993 0.7907714823179052 0.07619878910206107 0.01633303239627828 1.3239800552961695e-11 10.878118557147118 0.2203962437849487 RLLEDGEDFNLGDALDS(ph)SNSMQTIQK ddPTM_A549_PD325901_60min_R1 5 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 RLLEDGEDFNLGDALDS(0.328)S(0.328)NS(0.274)MQT(0.07)IQK;RLLEDGEDFNLGDALDS(0.505)S(0.412)NS(0.081)MQT(0.001)IQK;RLLEDGEDFNLGDALDS(0.626)S(0.372)NS(0.002)MQTIQK;RLLEDGEDFNLGDALDS(0.318)S(0.318)NS(0.318)MQT(0.046)IQK;RLLEDGEDFNLGDALDS(0.561)S(0.424)NS(0.015)MQTIQK 179.64 1.8933e-49 76635300.0 9338.42 9000.41 9592.73 9849.0 9632.380000000001 10779.2 9558.15 9597.599999999999 11146.100000000002 10130.6 11095.220000000001 True False 10286.449523818543 9758.906137641643 10243.750343571577 10457.35036129809 8955.83485870702 10691.417769032374 9921.890628670371 9406.168338828455 10677.668178606855 9490.952187100993 9730.578278394501 1.0571262292456227 1.002911220529415 1.0527380850854988 1.0746895058146022 0.9203805367449024 1.0987443359631865 1.0196609435536483 0.9666607749010809 1.0973313068469162 0.975373910528466 1.0 13.248309830118764 -8.773270647954837 24.99892538693484 1.0459619930681765 1.0249286435072271 0.0 0.05584630755832979 760.2059598032707 1606271.4792731723 0.009544586060645404 0.01019999624669434 1.685502309931151e-09 8.773270647954837 -0.021033349560949377 RLLEDGEDFNLGDALDSSNS(ph)MQTIQK ddPTM_A549_MK2206_60min_R1 2 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 RLLEDGEDFNLGDALDS(0.309)S(0.309)NS(0.38)MQT(0.003)IQK;RLLEDGEDFNLGDALDS(0.302)S(0.302)NS(0.382)MQT(0.014)IQK 78.717 1.2661e-06 8848800.0 755.35 770.27 1209.51 713.61 1122.31 866.71 749.1800000000001 864.21 1330.94 1716.33 1301.85 True False 882.8346134655454 809.4734529108216 1381.0367052655654 888.44448203517 957.2196857150675 958.4246769244639 885.2963084570049 986.7144140321259 1029.4842150744448 1328.609860957045 978.5647157678435 0.9021729470112948 0.8272048234190191 1.411288066095779 0.9079056987437367 0.9781874109000268 0.9794187972253052 0.9046885649891286 1.0083282159401052 1.0520348817877074 1.3577128211847838 1.0 9.934523454045294 RLLEDGEDFNLGDALDSSNS(ph)MQTIQK ddPTM_A549_PD325901_60min_R1 1 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 RLLEDGEDFNLGDALDS(0.062)S(0.062)NS(0.872)MQT(0.005)IQK 124.82 4.6494e-18 3265400.0 1274.4 1056.0 993.31 1228.3 901.34 1207.9 1468.4 1572.1 1147.9 1354.3 1373.9 True False 1403.776149836305 1144.992826032323 1060.7219898582662 1304.1693013283018 838.0329878541942 1198.0632628779686 1524.280765539312 1540.7432322114091 1099.657754929779 1268.7892668737165 1204.9190098696736 1.1650377646445633 0.9502653843565533 0.8803263797564252 1.0823709233945635 0.6955098068747687 0.9943102009881589 1.2650483169853723 1.2787110333482572 0.9126403898704529 1.0530079254131373 1.0 10.234720461834167 -7.506365551352908 24.91875876204098 1.012975535162862 0.9461656871939673 0.05193614291634485 0.15943963959332247 2393.5166925334465 3611869.0868561063 0.02567375813573371 0.04039050754452489 3.116265478413232e-08 7.506365551352908 -0.06680984796889466 RLLEDGEDFNLGDALDSSNSMQTIQK ddPTM_A549_MK2206_60min_R1 2 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 159.1 9.7503e-41 11067800.0 2360.01 2479.7 2588.0 2596.6 3569.6 2006.3400000000001 2321.9 2489.6 4041.1 4304.8 3909.1 False True 2758.3219912951895 2605.90613834495 2955.0173154643485 3232.767116565803 3044.516568620525 2218.6495670992963 2743.7591748395835 2842.5084240802357 3125.79730231065 3332.342690186556 2938.3625843285163 0.9387275777354516 0.8868565616249363 1.0056680313126292 1.1001933981216157 1.0361269180523096 0.7550632379176953 0.933771478534735 0.9673783757118642 1.063788832250247 1.1340815146365175 1.0 11.520796715388478 -8.63214954969158 6.128838151516376 1.0299819500617733 0.951985060911834 0.21474561118076296 0.08962845549964749 0.3212569137424633 16.390384468577345 0.015163841085591358 0.017190676840726723 2.3326546722513037e-09 8.63214954969158 -0.0779968891499393 RLLEDGEDFNLGDALDSSNSMQTIQK ddPTM_A549_PD325901_60min_R1 3 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;; 203.25 1.5284999999999998e-68 29178300.0 5948.200000000001 6545.900000000001 6851.1 6989.0 7544.199999999999 8245.8 7601.599999999999 7986.799999999999 8289.199999999999 8453.5 8565.5 False True 6552.056885166599 7097.545965838046 7316.056845011091 7420.694656829356 7014.321418077102 8178.648938686279 7890.8830477551255 7827.49700847661 7940.833750469479 7919.744567316661 7511.997801178174 0.8722123007196543 0.9448280142900034 0.9739162655057818 0.9878456907516003 0.9337491308872565 1.0887448525881553 1.0504373479073073 1.0419993742874836 1.0570868044215944 1.0542794043516008 1.0 12.874980925365461 -5.284446694137555 0.6037499150371887 1.0318362909443823 0.7847552307264526 0.6738185823263917 0.03569870427086856 1.652582875664552 0.4101595688251375 0.006687221372566907 0.2812775703824552 5.194614289571149e-06 5.284446694137555 -0.24708106021792975 RLLGPAPEDDGGHNDHSQPQASQDQDSHT(ph)LSPQV ddPTM_A549_PD325901_60min_R1 1 RLLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV 34 1 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 RLLGPAPEDDGGHNDHS(0.001)QPQAS(0.119)QDQDS(0.119)HT(0.38)LS(0.38)PQV 43.24 0.010094 8870800.0 3086.2 2989.3 3142.1 2911.2 2994.1 3002.9 2555.3 2320.8 2872.5 2610.3 3076.7 True False 3399.5087520596408 3241.218801949263 3355.3418009822285 3091.018212185093 2783.8047450842573 2978.4453780083204 2652.543339813813 2274.5098233676217 2751.7788143878274 2445.4852125234142 2698.2854048082286 1.2598773821338034 1.2012142215102783 1.243508857514907 1.145549024086567 1.0316939565116563 1.1038288880415907 0.9830477291568545 0.842946346340733 1.0198249634691259 0.9063108032106851 1.0 11.397827238702401 -6.68823029458328 1.1390890019800823 0.9962876496885075 1.2452704077574335 0.7610661530104874 0.06337857114135395 0.18666086481294678 0.4673281180160952 0.009279901955763701 0.02985431557050966 2.0500747914925024e-07 6.68823029458328 0.248982758068926 RLLS(ph)FQR ddPTM_A549_MK2206_60min_R1 2 RLLSFQR 7 1 A1E5M1;Q9NP56;Q13946-3;Q13946-2;Q13946 A1E5M1 PDE7B;PDE7A cAMP-specific 3,5-cyclic phosphodiesterase 7B;High affinity cAMP-specific 3,5-cyclic phosphodiesterase 7A 1 RLLS(1)FQR;RLLS(1)FQR 51.268 0.020984 6363400.0 404.22 222.98 474.86 271.89 213.76 374.83 430.41999999999996 304.01 486.64 554.53 377.9 True False 472.44245376983173 234.32872957541514 542.202288416306 338.50306220560594 182.31618716615975 414.49426180798275 508.62174255327716 347.104348491578 376.4168170043935 429.2612878621887 284.0570004905851 1.6631959534667076 0.8249355909930544 1.9087798838961443 1.191673014996951 0.641829586495977 1.4591939684363489 1.7905622522059095 1.2219531569090216 1.325145362917643 1.5111801051226559 1.0 8.150036647933344 -10.519361051291096 0.7917791464309193 0.9959443112761734 1.3274226152950144 0.0 0.39087789620334534 1.2645155744062764 1.3990741212638478 0.24892803401418048 0.0674293055577971 3.024398045353518e-11 10.519361051291096 0.33147830401884093 RLLS(ph)FQR ddPTM_A549_PD325901_60min_R1 2 RLLSFQR 7 1 A1E5M1;Q9NP56;Q13946-3;Q13946-2;Q13946 A1E5M1 PDE7B;PDE7A cAMP-specific 3,5-cyclic phosphodiesterase 7B;High affinity cAMP-specific 3,5-cyclic phosphodiesterase 7A 1 RLLS(1)FQR;RLLS(1)FQR 75.294 0.007611199999999999 8150800.0 483.8 370.31 662.77 617.6 601.0 497.72 676.84 682.64 571.81 497.11 616.14 True False 532.915019845264 401.51732330305805 707.7495577597757 655.747749328632 558.7878333374432 493.6667333385398 702.5975165810594 669.0242096792797 547.7788142228385 465.7223897626765 540.3586860332636 0.9862245830771355 0.7430570354121064 1.3097773313413674 1.2135416090790208 1.0341053966199132 0.9135908168008066 1.3002428474663377 1.2381113267384318 1.013731856970868 0.8618763828550865 1.0 9.0777735651537 -8.959389354092973 24.98830448645727 1.006057912293718 1.0931909804720645 0.09286115457583044 0.16945748461257829 366.84607090206936 225726.54556303695 0.02898051170397531 0.03081560160364807 1.0980209992257565e-09 8.959389354092973 0.08713306817834643 RLLS(ph)TDAEAVSTR ddPTM_A549_MK2206_60min_R1 1 RLLSTDAEAVSTR 13 1 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 RLLS(0.822)T(0.178)DAEAVSTR 50.653 0.011636 1209100.0 368.54 495.61 495.67 243.6 465.85 529.79 328.56 296.38 664.77 517.4 767.73 True False 430.74054206207967 520.8344320785338 565.9634593339312 303.2820109356193 397.32408210776333 585.8520261538599 388.25509905047323 338.39277262568305 514.2006564195519 400.51898065009385 577.0814527299203 0.746412035986314 0.9025319209527418 0.9807341002844663 0.5255445474827246 0.6885060682997116 1.0151981551000293 0.6727908117888869 0.5863864988640591 0.8910365321690606 0.6940423726241997 1.0 9.172631153629881 -8.972403610953725 7.789776018552638 0.9524657879578761 0.7691968654030334 0.0 0.16549654110796572 0.19821486764720045 40.64854089723552 0.026346402554226222 0.027365190802307173 1.0656053421159989e-09 8.972403610953725 -0.18326892255484262 RLLS(ph)WSDNWR ddPTM_A549_MK2206_60min_R1 1 RLLSWSDNWR 10 1 J3KSY6;J3KSX6;Q8TCD5 J3KSY6 NT5C 5(3)-deoxyribonucleotidase, cytosolic type 1 RLLS(0.992)WS(0.008)DNWR 44.193000000000005 0.024802 1688300.0 405.35 314.76 229.67 280.8 475.44 386.24 469.08 419.77 480.83 335.03 624.76 True False 473.76317014398455 330.77993955133945 262.24065952190756 349.59601260559117 405.50340581155984 427.11166043463805 554.3057641301311 479.2736829917096 371.92277272773015 259.34649031155976 469.6148495011853 1.0088334528757035 0.7043643102484658 0.5584164551024183 0.7444313419324888 0.8634807997282811 0.9094935155655891 1.1803412194458984 1.0205675640384535 0.7919740466528655 0.5522535980006424 1.0 8.875334217820235 -6.9144325110762255 3.015455097474833 0.9322331312018579 0.7361930510551056 0.13405363262379244 0.17723831878342974 0.2739942825406885 5.03393553790057 0.022104438851955205 0.04413808288700963 1.2177762193363907e-07 6.9144325110762255 -0.19604008014675234 RLMLWRRK ddPTM_A549_MK2206_60min_R1 1 RLMLWRRK 8 3 K7ERG3 K7ERG3 TPM4 0 45.081 0.016807 11888000.0 3811.0 3351.2 3577.9 3147.0 4532.1 4021.9 3385.6 3559.0 4863.6 5158.6 4865.3 False True 4454.203629995619 3521.7617658674817 4085.3000204790933 3918.0151412741993 3865.4340936365684 4447.494788478847 4000.719696083764 4063.4991489803824 3762.002365573254 3993.2686771967055 3657.1117345510565 1.217956669990126 0.9629899279792745 1.1170837308257962 1.0713413823969946 1.056963629827702 1.2161222055264378 1.0939561015558876 1.1111225042948307 1.0286812760001913 1.091918696240468 1.0 11.836488990209334 -8.853195660686227 3.682973291070276 1.0120526193339494 1.102186302831924 0.11271869279000746 0.07121041695965748 0.21397533744374306 5.405023760077124 0.011207544326695188 0.011868521359782691 1.4021818437308531e-09 8.853195660686227 0.09013368349797468 RLMLWRRK ddPTM_A549_PD325901_60min_R1 1 RLMLWRRK 8 3 K7ERG3 K7ERG3 TPM4 0 41.028999999999996 0.029416 21886000.0 4454.3 3975.3 4608.8 3988.6 4570.7 4465.8 4228.2 4827.5 5140.4 4840.2 4838.9 False True 4906.497256917649 4310.3124823165645 4921.580882965818 4234.966763232161 4249.669800058984 4429.432005431269 4389.1064647598205 4731.211725399512 4924.366864222523 4534.588945966301 4243.745976314407 1.1561712893048386 1.015685789482614 1.1597256080912022 0.9979312585788015 1.001395894989389 1.0437552177140739 1.0342528721692374 1.1148668539082676 1.1603820991423288 1.0685344908190015 1.0 12.051122586136334 -8.24155637982865 24.314123422167317 1.0807869634931804 1.0555864498562804 0.0389530380208416 0.0629456162143782 2301.523110885877 2814448.8150918162 0.01213647019246838 0.01565457982103316 5.733814257084341e-09 8.24155637982865 -0.025200513636900013 RLMS(ph)MEMD ddPTM_A549_MK2206_60min_R1 1 RLMSMEMD 8 1 Q9P2B2 Q9P2B2 PTGFRN Prostaglandin F2 receptor negative regulator 1 RLMS(1)MEMD 67.563 0.0063899 2977900.0 300.28 419.93 293.12 291.63 412.31 417.74 299.42 285.28 572.5 444.22 437.94 True False 350.9599228588517 441.3026433339499 334.68882361240696 363.07936309176824 351.6597451837542 461.94496952663 353.82073824474276 325.7193136333588 442.8296640946398 343.87039347581117 329.18741147088326 1.0661401700954602 1.3405817718305528 1.016712097576703 1.1029564024621967 1.068266078622082 1.4032886842864256 1.0748307071154157 0.9894646705290818 1.3452205298980828 1.0446037165860051 1.0 8.362765356166761 -5.765742029642629 24.991401248598727 1.1469888790453266 1.2033609324648091 0.016625609861805835 0.14455631675692962 429.7706138297155 2496342.826139821 0.021961889961612215 0.07194090709185225 1.7149756983512436e-06 5.765742029642629 0.05637205341948248 RLMS(ph)MEMD ddPTM_A549_PD325901_60min_R1 2 RLMSMEMD 8 1 Q9P2B2 Q9P2B2 PTGFRN Prostaglandin F2 receptor negative regulator 1 RLMS(1)MEMD;RLMS(1)MEMD 53.756 0.019591 3617800.0 683.53 668.34 595.69 571.11 583.9 799.0999999999999 577.48 643.28 1060.76 1085.24 792.31 True False 752.9214624118094 724.6633573394342 636.1171055749666 606.386167615083 542.8888783456456 792.5923945407601 599.4563174091811 630.4492757566026 1016.1799460922658 1016.7177611917836 694.8608928669051 1.083557112137012 1.042889828422446 0.9154596439446039 0.8726727519708484 0.7812914554822004 1.1406490172020296 0.8626997483422945 0.907302860512773 1.4624221286934718 1.4631961182862645 1.0 9.440580377311397 -8.72745294187779 24.999943454278117 1.218366111207466 0.9478408954495003 0.480739155540155 0.15815614860403784 164.98546255138913 121360.9042484016 0.03156624428706439 0.03579183209245396 1.8730400258938104e-09 8.72745294187779 -0.2705252157579656 RLNHS(ph)PPQSSSR ddPTM_A549_MK2206_60min_R1 9 RLNHSPPQSSSR 12 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RLNHS(1)PPQSSSR;RLNHS(0.994)PPQS(0.004)S(0.001)S(0.001)R;RLNHS(1)PPQSSSR;RLNHS(0.993)PPQS(0.004)S(0.002)S(0.002)R;RLNHS(1)PPQSSSR;RLNHS(1)PPQSSSR;RLNHS(0.999)PPQS(0.001)SSR;RLNHS(1)PPQSSSR;RLNHS(0.999)PPQSSSR 102.65 8.6771e-05 191525000.0 6201.27 7091.68 6075.36 5548.589999999999 7235.99 5244.45 5190.619999999999 5534.96 8934.710000000001 10956.45 11405.38 True False 7247.892769504842 7452.61622098565 6936.93740250366 6907.994799085672 6171.585456457994 5799.414218015836 6133.688465526441 6319.557530104094 6911.012450800026 8481.380335414997 8573.109373525565 0.8454217080079375 0.8693014280209598 0.8091506943706408 0.8057747193122371 0.7198771399693481 0.676465674860615 0.7154566911822859 0.7371371639815286 0.806126709655866 0.9893003770144546 1.0 13.06560283371138 -10.22329815690933 0.7898499651377126 0.9925850324068033 0.773011670896226 0.6844672149073143 0.056903411427782304 0.3017543728503424 0.3628500839110777 0.03562180976084204 0.013161685874959946 5.98000907548833e-11 10.22329815690933 -0.21957336151057727 RLNHS(ph)PPQSSSR ddPTM_A549_PD325901_60min_R1 7 RLNHSPPQSSSR 12 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RLNHS(1)PPQSSSR;RLNHS(1)PPQSSSR;RLNHS(1)PPQSSSR;RLNHS(0.997)PPQS(0.001)S(0.001)S(0.001)R;RLNHS(0.975)PPQS(0.004)S(0.011)S(0.011)R;RLNHS(1)PPQSSSR;RLNHS(1)PPQSSSR 138.28 6.8248999999999995e-09 254825700.0 10162.849999999999 9901.47 9642.01 10889.659 12173.900000000001 11065.07 10352.669999999998 12361.17 10505.74 12095.91 13944.439999999999 True False 11194.575050505253 10735.901626111985 10296.374780716287 11562.28850422002 11318.84726167504 10974.959738532261 10746.64652204839 12114.616767199723 10064.22028249497 11332.172178299088 12229.362281088192 0.9153850211647454 0.8778791059869301 0.8419388144743142 0.9454531020068191 0.9255468111512899 0.8974269864835248 0.878757720561381 0.9906172119812073 0.8229554453594483 0.9266363950819789 1.0 13.578061553823627 -11.090525173423487 1.4206985327010013 0.9999810134494879 0.8912788559613167 0.13187148973186746 0.04927399148972993 0.33372726966688565 1.2037627895086007 0.03423834957971374 0.007500522083271891 8.118481896442207e-12 11.090525173423487 -0.10870215748817114 RLNS(ph)SPR ddPTM_A549_PD325901_60min_R1 3 RLNSSPR 7 1 Q9UBS0 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 1 RLNS(0.545)S(0.455)PR;RLNS(0.948)S(0.052)PR;RLNS(0.92)S(0.08)PR 80.688 0.0065895 104120200.0 2599.33 2302.6400000000003 2299.5299999999997 2712.33 2973.2799999999997 2851.56 2319.6899999999996 2573.96 2496.62 2876.59 3048.9399999999996 True False 2863.212068074392 2496.6915539157826 2455.5899339972175 2879.8644639516324 2764.4470700591564 2828.337840791706 2407.9670723330746 2522.620348567442 2391.6957436299176 2694.9616164780796 2673.939708823089 1.0707840788731207 0.9337127331919833 0.9183415489491435 1.0770117420557621 1.033847943892461 1.0577418149927449 0.9005315506507513 0.9434095840843588 0.8944463989738204 1.0078617732425401 1.0 11.384751221012369 -7.762809730082293 24.99999264790454 0.9448924598588544 1.010783341288093 0.2410171986022699 0.05778141417671617 45.35116915677534 827373.0166017396 0.009661150682644571 0.013745701171157127 1.7265941691028747e-08 7.762809730082293 0.06589088142923871 RLPATLLNAFPTAPS(ph)PRPPR ddPTM_A549_MK2206_60min_R1 2 RLPATLLNAFPTAPSPRPPR 20 2 Q93015;Q93015-2 Q93015 NAT6 N-acetyltransferase 6 1 RLPATLLNAFPT(0.03)APS(0.97)PRPPR;RLPATLLNAFPT(0.017)APS(0.983)PRPPR 78.717 5.2913e-05 7913400.0 809.6600000000001 1146.3 999.81 671.0699999999999 1152.73 1044.64 714.84 956.9200000000001 1502.58 1202.01 1283.37 True False 946.3108137135281 1204.641773756832 1141.5980920302968 835.4821801254766 983.1649440121976 1155.1831114240892 844.7171749611645 1092.5663404445932 1162.2480291272032 930.4751061677994 964.6738097898974 0.9809645541425358 1.2487555498362692 1.183403219248725 0.8660773949149109 1.0191682764004213 1.1974857197332682 0.875650573684737 1.1325759332914307 1.2048093535164355 0.9645489456902054 1.0 9.913897388578683 RLPATLLNAFPTAPS(ph)PRPPR ddPTM_A549_PD325901_60min_R1 2 RLPATLLNAFPTAPSPRPPR 20 2 Q93015;Q93015-2 Q93015 NAT6 N-acetyltransferase 6 1 RLPATLLNAFPT(0.045)APS(0.955)PRPPR;RLPATLLNAFPT(0.295)APS(0.705)PRPPR 64.68 0.00036745 20313100.0 1196.6799999999998 1076.15 1180.9699999999998 1325.92 1629.9 1284.53 1398.62 1350.46 1475.8600000000001 1331.59 1300.75 True False 1318.1660726507457 1166.8409372487536 1261.1177259495187 1407.819067017196 1515.421446849748 1274.0692135645636 1451.8452494542307 1323.5240158846248 1413.8347366413998 1247.5131801494288 1140.7659961336183 1.1555096111896628 1.0228573968750039 1.1055008040420269 1.2340997818910249 1.3284244551344833 1.1168541294908403 1.2726933081586835 1.1602064054945762 1.239373141760264 1.093575005196164 1.0 10.155787168452967 -10.866476127337112 1.0722736836256934 0.998248220115611 1.1848211645974869 0.2503184679410678 0.08517270996875402 0.4380134152239956 0.8802266624763042 0.06218143230048068 0.014497821886278066 1.3599529162610867e-11 10.866476127337112 0.1865729444818759 RLPDAHS(ph)DYAR ddPTM_A549_MK2206_60min_R1 1 RLPDAHSDYAR 11 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RLPDAHS(1)DYAR 62.357 0.0030548000000000003 10183000.0 1546.4 1505.7 1597.6 1467.9 2416.9 1679.7 1697.3 1745.8 2530.9 2171.3 2732.0 True False 1807.3945141498891 1582.3336986353147 1824.16370293116 1827.5355658965345 2061.3772116480704 1857.4447391053784 2005.6774397929385 1993.272496288271 1957.6551910168087 1680.801821966657 2053.569000635825 0.8801235865901192 0.7705286251133482 0.8882894620859408 0.8899314146886196 1.0038022637709412 0.9044958988620676 0.9766788645387331 0.970638189255445 0.95329408966082 0.8184783766439053 1.0 11.003917707850835 -6.396241282114638 1.5980021494750174 0.9731558516004998 0.8277081487127461 0.29127896901381334 0.06024214955431045 0.15497809483306463 0.7559470450775595 0.005396666052925328 0.01785173785769973 4.0156764888042876e-07 6.396241282114638 -0.14544770288775366 RLPDAHSDYAR ddPTM_A549_MK2206_60min_R1 2 RLPDAHSDYAR 11 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 0 ; 99.28299999999999 8.6067e-05 9933400.0 559.56 651.45 399.63 639.4200000000001 580.6800000000001 350.57 532.09 412.02000000000004 748.48 892.5799999999999 884.28 False True 654.0000480714642 684.6060224320754 456.3035431912744 796.0779287046545 495.26274122214494 387.66708471046775 628.7638655154809 470.42509675832997 578.9504750769534 690.9455580762669 664.688871113561 0.983919058214124 1.0299646228244306 0.6864919258040588 1.1976700126947752 0.7451046087057626 0.5832308942693814 0.9459521482014667 0.7077372846189245 0.8710097313755695 1.0395022214208547 1.0 9.376535388828017 RLPIFNRIS(ph)VSE ddPTM_A549_MK2206_60min_R1 2 RLPIFNRISVSE 12 2 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 RLPIFNRIS(0.984)VS(0.016)E;RLPIFNRIS(1)VSE 67.234 0.0015995 14894500.0 1281.65 866.95 649.36 1171.5 1501.8400000000001 818.53 853.31 897.85 1806.55 1390.52 1924.56 True False 1497.961186665937 911.0740519571546 741.4490123531411 1458.5175525906336 1280.921325475418 905.1463013037595 1008.3453815764533 1025.122987050305 1397.3693094675484 1076.4005662419183 1446.6386368461508 1.03547710431105 0.6297868926986545 0.5125322893142068 1.0082113911808552 0.8854466435847331 0.6256892898126164 0.6970264417759293 0.7086240896242053 0.9659422013737892 0.7440701076452674 1.0 10.49848887347141 -8.795954061358096 8.042288389533418 0.9842620393168903 0.7555899691647279 0.06815978102886822 0.16913754183412877 0.19495943347234762 38.87580999249307 0.02611157179256824 0.027900136358771453 1.5997272350242178e-09 8.795954061358096 -0.2286720701521624 RLPIFNRIS(ph)VSE ddPTM_A549_PD325901_60min_R1 2 RLPIFNRISVSE 12 2 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 RLPIFNRIS(0.992)VS(0.008)E;RLPIFNRIS(0.983)VS(0.017)E 79.875 0.00028441 17736700.0 2008.04 1744.75 1705.69 1671.97 1562.95 1744.92 1705.79 1715.69 1930.82 1763.7 2302.8999999999996 True False 2211.894742559082 1891.7862057006569 1821.4483805472053 1775.2437895806224 1453.173783884786 1730.7099500463826 1770.7047718941044 1681.4692170172325 1849.6743500074178 1652.3396810050751 2019.6578992858792 1.0951828739615628 0.9366864588154084 0.901859855172127 0.8789824208388569 0.7195148170383739 0.8569322312745815 0.8767350017645062 0.8325515017230268 0.915835474246126 0.8181284967069511 1.0 10.979895226747457 -9.866341387203132 0.9364825364650902 0.9888863847021099 0.8836437107072678 0.0 0.09919251120468163 0.6069332919110829 1.092444616349491 0.031196910103150056 0.017435658533827038 1.3603749079600814e-10 9.866341387203132 -0.1052426739948421 RLPIFSRLS(ph)ISDD ddPTM_A549_MK2206_60min_R1 2 RLPIFSRLSISDD 13 2 P47974;Q07352 P47974;Q07352 ZFP36L2;ZFP36L1 Zinc finger protein 36, C3H1 type-like 2;Zinc finger protein 36, C3H1 type-like 1 1 RLPIFSRLS(0.998)IS(0.001)DD;RLPIFS(0.001)RLS(0.815)IS(0.184)DD 110.35 1.7804e-05 76062000.0 2409.1000000000004 2131.72 2703.3 2215.6000000000004 3494.1000000000004 2686.3 1769.29 2300.1 3354.8 3146.2 3474.1000000000004 True False 2815.6971831599203 2240.2154426877046 3086.668589217453 2758.422099462064 2980.122518606282 2970.5624829783756 2090.7470909392855 2626.1462187608245 2594.943156514755 2435.4712348692024 2611.385089717761 1.078238975265131 0.8578648363692034 1.18200437054309 1.0563061381958778 1.1412037735607867 1.1375428674517838 0.800627643610102 1.0056526052404853 0.9937037500643834 0.9326358048297001 1.0 11.350599506028107 RLPIFSRLS(ph)ISDD ddPTM_A549_PD325901_60min_R1 2 RLPIFSRLSISDD 13 2 P47974;Q07352 P47974;Q07352 ZFP36L2;ZFP36L1 Zinc finger protein 36, C3H1 type-like 2;Zinc finger protein 36, C3H1 type-like 1 1 RLPIFS(0.001)RLS(0.905)IS(0.094)DD;RLPIFSRLS(0.891)IS(0.109)DD 123.42 1.9274e-06 112893000.0 3253.3 3812.5 3080.2 4413.4 4233.9 4398.6 3881.6000000000004 4591.6 4646.6 5290.9 5057.7 True False 3583.572621047121 4133.792754969914 3289.2408947472886 4686.005694441364 3936.5254701620647 4362.779259951182 4029.3164120930205 4500.016935959485 4451.319560986769 4956.831671049357 4435.634963401886 0.8079052155136589 0.931950620165444 0.7415490503358787 1.0564452965821733 0.887477329095397 0.9835749100068353 0.9083967561214186 1.0145147139223154 1.0035360433656726 1.117502164165408 1.0 12.114924926500894 -5.915890543463745 0.4104206179326518 1.004878436950274 0.7566792478771535 0.43093786406993406 0.07867582104646498 2.2033933440388616 0.3504558108481302 0.016121810153976103 0.24281726578395263 1.2136947030242769e-06 5.915890543463745 -0.24819918907312044 RLPLPVQNAPSETSEEEPKRS(ph)PAQQESNQAEASK ddPTM_A549_MK2206_60min_R1 1 RLPLPVQNAPSETSEEEPKRSPAQQESNQAEASK 34 3 A0A0D9SFF0;Q08050-2;Q08050;Q08050-3 A0A0D9SFF0 FOXM1 Forkhead box protein M1 1 RLPLPVQNAPS(0.025)ET(0.132)S(0.132)EEEPKRS(0.711)PAQQESNQAEASK 108.92 4.4079e-15 6257200.0 986.55 756.62 781.38 1065.8 1331.4 847.9 708.51 727.99 1291.9 1226.0 944.98 True False 1153.0555211682436 795.1287262146855 892.191433523003 1326.9210478455798 1135.5528236949156 937.624215209532 837.2370958980121 831.1848118758719 999.286712740376 949.0457485060206 710.3153858787858 1.623300781724881 1.1194023697388598 1.256049708706794 1.8680730760237492 1.5986600406945088 1.3200111300553135 1.1786835996269482 1.170163040812567 1.406821156638866 1.3360906540576805 1.0 9.472315925117694 -7.515278086606927 4.360380618160043 1.1950807266424575 1.4797477977979667 0.28328858401663537 0.2066424468191515 0.2296563560945313 10.703201039629095 0.03589562129767671 0.05602337405327682 3.0529656181432034e-08 7.515278086606927 0.28466707115550927 RLPLPVQNAPSETSEEEPKRS(ph)PAQQESNQAEASK ddPTM_A549_PD325901_60min_R1 1 RLPLPVQNAPSETSEEEPKRSPAQQESNQAEASK 34 3 A0A0D9SFF0;Q08050-2;Q08050;Q08050-3 A0A0D9SFF0 FOXM1 Forkhead box protein M1 1 RLPLPVQNAPS(0.004)ET(0.027)S(0.027)EEEPKRS(0.939)PAQQES(0.003)NQAEASK 109.62 3.753e-15 11436000.0 929.0 873.97 1033.1 862.81 1211.3 1003.4 1109.8 1096.3 1003.9 991.08 1147.7 True False 1023.3113961063465 947.6225190979816 1103.2123785349736 916.1038141163161 1126.2224667581443 995.2286430762099 1152.0340463058624 1074.4334364692875 961.7095741562894 928.5030396612293 1006.5401758697315 1.0166622462159778 0.9414651713024368 1.0960440576370531 0.9101512647766186 1.1189046336724688 0.988761965925754 1.1445484978385612 1.067452111924783 0.9554606931862358 0.9224699241229275 1.0 9.975189042983185 -8.766994363299684 24.972423780013543 0.9789675496176021 1.0350615148389846 0.17345947257806338 0.07059297003863309 200.88555654482653 903077.4847153885 0.011262446234853382 0.012157687196173817 1.710037509492519e-09 8.766994363299684 0.056093965221382436 RLPS(ph)KELPDSSSPVPANNIR ddPTM_A549_MK2206_60min_R1 2 RLPSKELPDSSSPVPANNIR 20 2 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 RLPS(1)KELPDSSSPVPANNIR;RLPS(1)KELPDSSSPVPANNIR 143.31 1.4912e-21 25402900.0 2282.35 2082.18 2040.4299999999998 1473.31 1835.37 1493.79 1336.29 1478.4099999999999 2154.4700000000003 2311.3 2920.8 True False 2667.5548818998946 2188.1540682901523 2329.7936557159646 1834.2710161393986 1565.3895042999382 1651.8618663024495 1579.0765957820697 1687.9791449407373 1666.4859849816216 1789.1757247324347 2195.4847500209066 1.2150186339825373 0.9966610190616516 1.0611750574417695 0.8354742687791075 0.7130040435421069 0.7523904988575847 0.7192382437486905 0.768841206901876 0.7590514964705414 0.8149342530005718 1.0 11.100323798108267 -6.224550366502619 4.328852009444464 0.8386837909070824 1.0874456222083293 0.6376157533805283 0.09537404964058552 0.1591516405992469 6.902892976541399 0.01777946041848096 0.04800978353977561 5.962791634463571e-07 6.224550366502619 0.24876183130124685 RLPS(ph)SPAS(ph)PSPK ddPTM_A549_MK2206_60min_R1 1 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 2 RLPS(0.675)S(0.326)PAS(0.868)PS(0.131)PK 54.768 0.0049353999999999995 11067000.0 2988.7 3848.5 2938.9 3957.9 3622.8 3125.6 2666.3 3101.8 3855.6 3909.3 3688.4 True False 3493.1194933004203 4044.3722117274438 3355.6802119081053 4927.585677676881 3089.8909190941417 3456.348917394638 3150.7321968537753 3541.489648864107 2982.3127561280203 3026.1864148732357 2772.468485338646 1.2599311811018654 1.458762194454102 1.2103582888871764 1.7773279313128045 1.1144909078080012 1.2466684240677524 1.1364357118991475 1.2773777835860696 1.0756886045410692 1.09151336827679 1.0 11.43695534602146 -8.062399904137207 0.5485602077097882 1.0126151773358043 1.4027908397998898 0.36021264128912556 0.16576112470987187 0.5016601986140852 0.32193217445109684 0.04276114470855053 0.0698818843936321 8.661639331625864e-09 8.062399904137207 0.3901756624640855 RLPS(ph)SPAS(ph)PSPK ddPTM_A549_PD325901_60min_R1 3 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 2 RLPS(0.973)S(0.43)PAS(0.537)PS(0.06)PK;RLPS(0.808)S(0.193)PAS(0.843)PS(0.157)PK;RLPS(0.949)S(0.145)PAS(0.858)PS(0.048)PK 96.464 0.00042027 28815200.0 9293.8 11757.3 10722.1 11356.5 13105.7 12460.7 10808.5 12684.4 12481.6 12561.400000000001 13458.2 True False 10237.299734266051 12748.12893324794 11449.766183225092 12057.965212517178 12185.200844210525 12359.224190531922 11219.82338213815 12431.399691280702 11957.041757933206 11768.27106025807 11802.926718558885 0.8673526472183338 1.0800820200978476 0.9700785623977073 1.021608072306106 1.0323880792253461 1.0471321635080828 0.9505967163632503 1.0532472146703755 1.0130573579798636 0.9970638080598838 1.0 13.526857022086364 -5.243388161895896 24.51202899692268 1.0121169013537028 0.8673524874440578 0.5892794845375767 0.0356297741345814 1480.2771485780763 2010051.7991890777 0.0042350232620819 0.1905047837700488 5.709680910895881e-06 5.243388161895896 -0.144764413909645 RLPS(ph)SPASPSPK ddPTM_A549_MK2206_60min_R1 3 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.499)S(0.499)PAS(0.001)PSPK;RLPS(0.727)S(0.239)PAS(0.032)PS(0.001)PK;RLPS(0.744)S(0.253)PAS(0.003)PSPK 54.281000000000006 0.0087539 182972000.0 10609.9 10622.8 10602.9 9356.6 13534.3 9131.3 9147.5 9218.0 14975.6 15182.199999999999 15956.5 True False 12400.591732849778 11163.455146352673 12106.550654612422 11648.96742003374 11543.422398778797 10097.568105133618 10809.48234284211 10524.679728941037 11583.650511119095 11752.53047550416 11994.060673003503 1.0338943641298484 0.9307485972185904 1.0093788071176022 0.9712279883870767 0.962428214554641 0.8418806924881952 0.9012362566392824 0.8774909528872251 0.9657822172929166 0.9798625166168298 1.0 13.550032555483115 -4.062824689474698 16.55298801314237 0.9626960200596528 0.953239884673236 0.0 0.05694601936754311 0.0 0.0 0.007947130683355908 0.0 8.653171486100647e-05 4.062824689474698 -0.009456135386416875 RLPS(ph)SPASPSPK ddPTM_A549_PD325901_60min_R1 1 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.663)S(0.337)PASPSPK 78.932 0.00039568 107740000.0 2072.7 2295.3 1800.9 2078.9 2628.6 2091.3 2217.7 2642.4 2120.0 2228.3 2423.4 True False 2283.118978158906 2488.732986356052 1923.1199036914468 2207.3089314755393 2443.976204177707 2074.269146168305 2302.0957870720044 2589.695259077303 2030.9037724985903 2087.6047577159425 2125.3371631983164 1.0742384868117356 1.1709826701617918 0.9048540330407799 1.038568830252734 1.149923996294257 0.9759718044203576 1.0831673331339544 1.2184867906700492 0.955567807153187 0.982246390767669 1.0 11.053476013013155 RLPSS(ph)PAS(ph)PSPK ddPTM_A549_PD325901_60min_R1 1 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 2 RLPS(0.347)S(0.644)PAS(0.94)PS(0.069)PK 49.354 0.0077816000000000005 19242000.0 5633.2 6130.0 6089.9 6011.6 5960.1 5471.7 5870.4 5823.7 5671.0 6184.5 6237.3 True False 6205.07831705734 6646.5966132368685 6503.197235543639 6382.922878665811 5541.483137228773 5427.140289336356 6093.801284406136 5707.541734895732 5432.667591433729 5794.00961454663 5470.15164150238 1.1343521576219253 1.215066244746988 1.1888513631328752 1.1668639732467707 1.0130401313165063 0.9921370822995665 1.1140095711738753 1.0433973514723538 0.9931475299908952 1.0592045695017154 1.0 12.417365112087795 -6.746651261590595 5.171532632637303 1.0095973507985345 1.1817537580422124 0.7322329535906973 0.04113765428347062 0.0589185818176738 4.359581608765809 0.005867929982911004 0.012002339294056556 1.792044287744245e-07 6.746651261590595 0.17215640724367787 RLPSS(ph)PASPSPK ddPTM_A549_MK2206_60min_R1 3 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.171)S(0.828)PAS(0.001)PSPK;RLPS(0.195)S(0.805)PASPSPK;RLPS(0.147)S(0.853)PASPSPK 115.57 2.0926e-05 159951600.0 4096.9 4948.3 4998.900000000001 4634.5 6287.9 4379.7 4093.9 4458.7 6949.099999999999 7582.900000000001 6979.1 True False 4788.356560411716 5200.147334101835 5707.819187895952 5769.952708050609 5362.958239530763 4843.156946990429 4837.7086377000605 5090.734379196074 5375.13994543242 5869.91762344723 5245.996856638905 0.9127639019363808 0.9912600934026397 1.0880332840216254 1.0998772713233 1.022295358935231 0.923210036022291 0.9221714709145987 0.9704036274352045 1.02461745447485 1.1189327374488875 1.0 12.357001227813436 -5.293451281041142 4.476958279797905 1.008466922986593 0.9086712455695983 0.17612943349679466 0.06300317409646088 0.22824175364597665 10.411335360770613 0.007820740073907104 0.06563532151398775 5.088018936100225e-06 5.293451281041142 -0.09979567741699469 RLPSS(ph)PASPSPK ddPTM_A549_PD325901_60min_R1 7 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.133)S(0.865)PAS(0.002)PSPK;RLPS(0.131)S(0.869)PASPSPK;RLPS(0.144)S(0.856)PASPSPK;RLPS(0.039)S(0.961)PASPSPK;RLPS(0.187)S(0.813)PASPSPK;RLPS(0.137)S(0.863)PASPSPK;RLPS(0.347)S(0.653)PASPSPK 168.61 1.1058e-15 349744700.0 22061.3 22383.800000000003 21986.5 23714.3 24149.8 24407.7 23338.000000000004 24764.5 24369.3 24457.0 25177.899999999998 True False 24300.946935329306 24270.161381952923 23478.636105564987 25179.078451917067 22453.601360287154 24208.93178354715 24226.14036104363 24270.552620125585 23345.143067523517 22912.780846142272 22081.177915858247 1.1005276542732292 1.0991334553997045 1.0632873026535017 1.140295981847688 1.0168661040569507 1.0963605236911202 1.0971398560963956 1.0991511735746204 1.0572417448236544 1.0376611670560738 1.0 14.430529513986189 -9.791662210139323 0.5999608335159604 1.000776691464158 1.0900501939688896 0.40584418193676575 0.031051973708505414 0.3897076280663337 0.2937810802441477 0.015531351099595922 0.006875364218214132 1.6156146770388268e-10 9.791662210139323 0.08927350250473154 RLPSSPAS(ph)PSPK ddPTM_A549_MK2206_60min_R1 4 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 RLPSSPAS(0.939)PS(0.061)PK;RLPS(0.001)S(0.009)PAS(0.93)PS(0.06)PK;RLPSSPAS(0.956)PS(0.044)PK;RLPS(0.001)S(0.019)PAS(0.977)PS(0.004)PK 147.39 4.7317e-12 691368000.0 8329.6 9725.199999999999 9833.6 8384.85 11933.800000000001 9631.400000000001 9113.2 8395.8 13423.4 13916.7 13786.7 True False 9735.432840832207 10220.171140312254 11228.152346735014 10439.138626410217 10178.353828609272 10650.58835519411 10768.950476828502 9585.930361059145 10383.021332765038 10772.907804432089 10363.081896437021 0.9394341314796896 0.9862096278353352 1.083476176193823 1.007339199934273 0.9821744081853429 1.027743335585907 1.0391648531245348 0.9250076817741765 1.0019240836391414 1.039546720955276 1.0 13.339165492178484 -5.332539563359163 4.3924621200501335 1.0042929592422707 0.9384300663719665 0.21383094663500046 0.038370442904560174 0.21836598404535518 7.395870497709222 0.004778491896856172 0.035321742732381506 4.6500801293658835e-06 5.332539563359163 -0.06586289287030422 RLPSSPAS(ph)PSPK ddPTM_A549_PD325901_60min_R1 4 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 RLPSSPAS(0.987)PS(0.013)PK;RLPS(0.002)S(0.106)PAS(0.888)PS(0.004)PK;RLPSS(0.002)PAS(0.966)PS(0.032)PK;RLPS(0.003)S(0.008)PAS(0.976)PS(0.013)PK 145.6 5.9874e-12 1107593000.0 12964.4 11724.899999999998 12083.53 14047.5 14770.0 13422.8 13656.800000000001 13585.900000000001 14328.199999999999 14219.4 14920.6 True False 14280.53634411315 12712.99847154013 12903.59100996874 14915.18217081276 13732.606153733826 13313.489167115158 14176.516997287708 13314.918566567634 13726.035581657676 13321.584657302023 13085.460789476272 1.0913285037388973 0.9715361710276426 0.9861013851607123 1.1398285785096698 1.0494552981105572 1.017426086960749 1.0833792730240648 1.017535322659474 1.0489531704299304 1.0180447499422909 1.0 13.675677107679185 -10.770991303755062 0.7430006119569317 0.9960920796609457 1.044226540670179 0.07898566949836405 0.04603974911487172 1.5588687264231957 1.31978491691277 0.0467001663936283 0.008622508183359922 1.6943717279427355e-11 10.770991303755062 0.04813446100923324 RLPSSPAS(ph)PSPKGT(ph)PEKANER ddPTM_A549_PD325901_60min_R1 1 RLPSSPASPSPKGTPEKANER 21 3 A0A0C4DH22;Q9H4G0;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 2 RLPS(0.21)S(0.239)PAS(0.469)PS(0.117)PKGT(0.965)PEKANER 58.945 0.0010111 35149000.0 2644.6 3329.5 2749.2 2828.6 3579.5 3631.0 3051.1 3720.1 3469.2 3509.9 3844.1 True False 2913.077845148377 3610.0886498812683 2935.777244282596 3003.3161977833056 3328.088268604621 3601.4303398542133 3167.211280125983 3645.8996871380064 3323.4015884679725 3288.28431499672 3371.300069757633 0.8640814477715126 1.0708298208948224 0.8708145770286335 0.8908480810488096 0.9871824517963723 1.068261580201944 0.9394628821496978 1.0814521435940037 0.9857922818204954 0.9753757443587983 1.0 11.719089327850329 -6.913440105443448 7.38293821557837 1.001729159201503 0.9311649768053961 0.2711631801794686 0.06388526172524259 0.2580926871089227 18.900572582916784 0.008401798947257764 0.015942196312958297 1.220562139685351e-07 6.913440105443448 -0.07056418239610684 RLPSSPASPS(ph)PKGT(ph)PEKANEPVK ddPTM_A549_PD325901_60min_R1 1 RLPSSPASPSPKGTPEKANEPVK 23 3 Q9H4G0-4;H7C2K6;X6RC15 Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 2 RLPS(0.085)S(0.09)PAS(0.104)PS(0.726)PKGT(0.995)PEKANEPVK 45.07 0.010192 3947600.0 1017.2 944.41 907.27 931.72 1491.5 1034.0 925.96 1063.9 1157.9 1284.8 1209.7 True False 1120.4653951769376 1023.9987451071827 968.8427980577145 989.2702283103521 1386.7421853956682 1025.579446821607 961.197914504754 1042.6796798865962 1109.237489705715 1203.6775087346605 1060.9145689201143 1.056131594382231 0.9652037733344471 0.9132147172263663 0.9324692650015282 1.3071195608211958 0.9666937158432329 0.9060087802198247 0.9828121042280726 1.0455483619522614 1.1345659151046081 1.0 10.051092771303452 RLPSSPASPS(ph)PKGT(ph)PEKANER ddPTM_A549_MK2206_60min_R1 2 RLPSSPASPSPKGTPEKANER 21 3 A0A0C4DH22;Q9H4G0;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 2 RLPS(0.067)S(0.074)PAS(0.333)PS(0.533)PKGT(0.993)PEKANER;RLPS(0.006)S(0.006)PAS(0.162)PS(0.871)PKGT(0.955)PEKANER 59.282 0.00089416 50945000.0 4351.5 3805.8 4173.0 3331.0 6391.3 5018.9 4093.6 4552.799999999999 7348.1 7412.3 7803.9 True False 5085.926816039345 3999.4989641138895 4764.794148930728 4147.095149534271 5451.1482365039155 5549.996666723809 4837.3541315833245 5198.173342365237 5683.767082504488 5737.856281934074 5865.976253316958 0.8670213782681905 0.6818130165208808 0.8122764128539458 0.706974418314303 0.9292823566105515 0.9461335039645828 0.8246460474244178 0.8861565607985359 0.9689379631038502 0.9781587981522364 1.0 12.518155515441373 -7.5832481356614565 0.41608260905649086 1.0010850887124947 0.7421360653742555 0.5381790516354619 0.06956284419085439 0.6047889367012302 0.21116233741016133 0.023163756353119753 0.059766652466978695 2.6106693132138696e-08 7.5832481356614565 -0.2589490233382392 RLPSSPASPS(ph)PKGT(ph)PEKANER ddPTM_A549_PD325901_60min_R1 1 RLPSSPASPSPKGTPEKANER 21 3 A0A0C4DH22;Q9H4G0;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 2 RLPS(0.003)S(0.016)PAS(0.37)PS(0.612)PKGT(1)PEKANER 121.48 3.754e-14 51821000.0 4545.6 4379.0 4567.7 4545.8 5504.8 5056.4 5148.8 4546.1 4517.0 4898.9 4591.1 True False 5007.065965706144 4748.033698101837 4877.6915898114385 4826.583741739148 5118.161838529046 5015.222354844079 5344.74040153147 4455.424469153544 4327.166198290625 4589.582617948493 4026.4238053807835 1.2435516497331607 1.1792185640658883 1.2114203138013062 1.1987272018631163 1.2711433485191743 1.2455773652395699 1.3274162531994098 1.1065463260969841 1.0746921852855975 1.1398657567579256 1.0 11.975283317264635 -8.53215862263695 3.022883109927793 1.034947103244963 1.235947521600907 0.6653800894688683 0.052376972029771145 0.08086815563222445 1.515261735575106 0.008061750826769725 0.009426729393017561 2.9365768944970524e-09 8.53215862263695 0.20100041835594396 RLPSSPASPSPK ddPTM_A549_PD325901_60min_R1 2 RLPSSPASPSPK 12 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 0 ; 66.498 0.0029989 1973200.0 1136.8 1676.2 1241.5 1882.9 1554.4 1282.0 1265.9 1116.9 2066.2 1370.9 1505.7 False True 1252.2070991320718 1817.4592566244123 1325.755655745977 1999.2024566238365 1445.2243063888884 1271.5598170457458 1314.0745172270601 1094.6225533089005 1979.3647994040498 1284.341140040743 1320.5084454187108 0.9482764790156402 1.3763329291302842 1.0039736287529781 1.5139641579421503 1.0944453338430806 0.9629319838560788 0.9951276887217404 0.828940213980846 1.4989414162939538 0.9726110760567687 1.0 10.366877813069577 -11.401287772795474 2.1603857735349696 0.9978755155899253 1.2037413912793267 0.0 0.22834830294474195 0.7109087312076183 6.002034347951007 0.19855681126305946 0.036336685667359536 3.969284490467138e-12 11.401287772795474 0.2058658756894014 RLQKLES(ph)PVAH ddPTM_A549_PD325901_60min_R1 1 RLQKLESPVAH 11 2 Q86TM6-2;Q86TM6-3;Q86TM6 Q86TM6-2 SYVN1 E3 ubiquitin-protein ligase synoviolin 1 RLQKLES(1)PVAH 48.659 0.009803000000000001 5063600.0 2347.5 2375.5 2774.0 2795.0 2937.6 3283.3 2514.5 3133.1 3208.4 3502.1 3244.8 True False 2585.81647186184 2575.691721817976 2962.26032141711 2967.6408020944405 2731.2731101698378 3256.561893374645 2610.190673487196 3070.6078626305966 3073.5621055115457 3280.9768083278727 2845.7101704819247 0.9086717609839826 0.9051138617471292 1.0409564375684286 1.0428471714643612 0.9597861154311765 1.1443758142183333 0.917237004865171 1.0790304277932088 1.0800685668530445 1.1529553650125357 1.0 11.474573018592253 -5.760476990895921 24.94840767381916 1.0356201648799914 0.9068927609758031 0.3784216923938275 0.06780765600511483 15.736716516188839 407882.9307263542 0.007539690392916274 0.026201788134190516 1.7358932287876665e-06 5.760476990895921 -0.12872740390418835 RLQLS(ph)PWESSVVNR ddPTM_A549_PD325901_60min_R1 2 RLQLSPWESSVVNR 14 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 RLQLS(1)PWESSVVNR;RLQLS(1)PWESSVVNR 168.08 7.812699999999999e-23 37463000.0 3046.2 2364.76 1935.54 2397.99 2540.7 2202.14 2218.41 2068.81 2790.2 2619.1 2923.4 True False 3355.447981506084 2564.0466243259434 2066.897383747538 2546.108396069569 2362.24999693917 2184.2065019571905 2302.83280651053 2027.5459615999519 2672.937597181869 2453.7295790215976 2563.840332959461 1.308758559716105 1.0000804618617745 0.8061724270332006 0.9930838372959739 0.9213717276272061 0.8519276625295709 0.8981966532418 0.7908238026895924 1.0425522848751179 0.957052413708321 1.0 11.324090703397152 -5.272322235350471 4.7548050376339965 0.9650435200248942 1.3256981702207025 0.5888682108904151 0.08689493829907076 0.10795416508628436 6.748450886171195 0.01371777603142207 0.12618119898129332 5.341678734822617e-06 5.272322235350471 0.3606546501958082 RLQPST(ph)PEKK ddPTM_A549_MK2206_60min_R1 2 RLQPSTPEKK 10 2 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 RLQPS(0.27)T(0.73)PEKK;RLQPS(0.244)T(0.756)PEKK 64.12100000000001 0.002144 14000600.0 6019.0 5980.5 5600.9 5651.5 7657.0 6204.5 5545.3 6101.0 8271.0 9457.9 8533.3 True False 7034.860049578492 6284.8819052191675 6395.191840102111 7036.117753705477 6530.665443166566 6861.056071786226 6552.80923047416 6965.835433528887 6397.631706072952 7321.353821203177 6414.246102901061 1.0967555557927122 0.9798317377277769 0.9970293838912212 1.0969516355980096 1.01815012059061 1.0696589999381347 1.0216024027376234 1.085994413338514 0.9974097662357241 1.1414207848825517 1.0 12.647063993075804 -8.826652575487577 24.997129015825255 0.9987767281236266 1.0427050831711668 0.0 0.057130564771068204 60.15107389255474 23056.133529902585 0.006087840792451182 0.006481000063610616 1.490553005291483e-09 8.826652575487577 0.043928355047540224 RLQS(ph)IGTENTEENR ddPTM_A549_MK2206_60min_R1 1 RLQSIGTENTEENR 14 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 RLQS(0.995)IGT(0.005)ENTEENR 72.21 0.00063872 3149300.0 1164.5 1293.9 1175.5 2146.2 1486.8 1191.5 1062.6 1012.0 1493.2 1937.6 1655.2 True False 1361.0391307084494 1359.7539833062588 1342.203575861029 2672.0190963465793 1268.09368955205 1317.5837391463106 1255.6606654828129 1155.454099120019 1154.9925841504203 1499.894814278356 1244.1681588039598 1.0939350288604393 1.0929020917987593 1.078795954038329 2.147635010138209 1.019230142307363 1.0590077633982582 1.0092371007870038 0.9286960857692876 0.9283251431709476 1.205540266936449 1.0 10.280965774533392 -6.965385180040233 24.999828735068558 0.9743363767065626 1.348647835826294 0.22704934211664418 0.2873367168286021 175.47010010949361 126728.89944458648 0.03884652307144742 0.07341282592901172 1.0829659947856824e-07 6.965385180040233 0.3743114591197315 RLQS(ph)IGTENTEENRR ddPTM_A549_MK2206_60min_R1 2 RLQSIGTENTEENRR 15 2 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 RLQS(1)IGTENTEENRR;RLQS(1)IGTENTEENRR 116.6 1.8905000000000002e-07 21729700.0 1579.58 1452.8600000000001 1276.5900000000001 1360.74 1586.4699999999998 1411.42 978.0799999999999 942.3699999999999 1821.6399999999999 1957.71 2131.02 True False 1846.174486976774 1526.8043683332041 1457.6296579399661 1694.1213610859409 1353.102364584101 1560.7755275752295 1155.7844755274127 1075.9538333870876 1409.041448561326 1515.4619513113546 1601.828920840028 1.1525416122519543 0.9531631926913395 0.9099783622183315 1.0576169146687107 0.8447233952265699 0.9743709251776591 0.7215405218937478 0.6717033382209368 0.8796454042185723 0.9460822760751622 1.0 10.645504357355376 -2.0000301819167308 0.9117935235674028 0.9068707821700916 131.57624473553395 0.31824860761044527 0.10924918794841218 1085.6642334413918 2.1259854560767164 0.018240527236669055 295477.32568998623 0.009999305059832788 2.0000301819167308 130.66937395336384 RLQS(ph)IGTENTEENRR ddPTM_A549_PD325901_60min_R1 1 RLQSIGTENTEENRR 15 2 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 1 RLQS(0.937)IGT(0.05)ENT(0.013)EENRR 48.824 0.0086406 14434000.0 3665.6 3482.0 3479.9 3181.4 4238.2 3449.3 4258.6 3827.1 4660.1 4621.9 4072.9 True False 4037.7290135279054 3775.4403600800615 3716.0669403386455 3377.90785251637 3940.5234529962568 3421.210044411772 4420.66335339534 3750.76548819813 4464.252202934284 4330.072445221612 3571.9591202403312 1.1303961992869156 1.0569662846046344 1.0403441963492064 0.9456737154060977 1.1031826850054005 0.9577965282485046 1.2376018886514877 1.050058346677206 1.2498049537123248 1.2122402019344143 1.0 11.802499854101058 -7.74666324817304 24.998389677537755 1.1229438364097484 1.0386021015273552 0.2584577524169126 0.0882887257327037 385.8420579030023 652769.6787772959 0.015959438819599 0.02361752437525839 1.7919948277785637e-08 7.74666324817304 -0.08434173488239316 RLQSIGTENTEENRR ddPTM_A549_MK2206_60min_R1 2 RLQSIGTENTEENRR 15 2 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 188.59 5.230700000000001e-34 99773000.0 2900.2 3133.3 3257.8 3341.2 3204.5 2052.98 2365.5 1727.15 3725.1 4793.6 4467.9 False True 3389.6828569176832 3292.7715865936357 3719.805027171468 4159.794149992168 2733.122294975483 2270.2249809421687 2795.2807304720436 1971.9788016750413 2881.3707977623453 3710.7224307002116 3358.397122233093 1.0093156745750747 0.9804592687371585 1.1076132130252854 1.2386248554269257 0.813817483609012 0.6759846731385454 0.8323258473415386 0.5871785646254416 0.8579601199296052 1.1049087691668957 1.0 11.713557120178665 -6.780495237772354 24.963001538460627 0.8705132775778716 1.07829372976247 0.38233486643470993 0.14633511619406672 225.7202062414426 295691.061819624 0.022052536900465193 0.041723145011934255 1.6576955141006135e-07 6.780495237772354 0.2077804521845984 RLQSIGTENTEENRR ddPTM_A549_PD325901_60min_R1 2 RLQSIGTENTEENRR 15 2 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 ; 252.3 4.125699999999999e-77 121059000.0 4299.6 4897.1 4160.1 5152.4 5144.2 5631.7 5345.1 5451.7 5532.5 5312.9 6957.700000000001 False True 4736.092226801772 5309.795803373946 4442.429402713524 5470.652046050591 4782.8891385265815 5585.837302384182 5548.510705450951 5342.961566724086 5299.988264787004 4977.442587294811 6101.947008494235 0.7761608254232427 0.8701805826865471 0.7280347398181967 0.896542044438464 0.7838300024350499 0.9154188482149057 0.9093016864497723 0.8756158582312169 0.8685733024900311 0.8157138336937286 1.0 12.57505393574966 -14.999999999987981 0.09583729369597513 1.5061112101992868 0.7282503468595211 0.01388420760367659 0.07274299495573362 53.58923990425292 0.37169388335802367 5.4887659349360485 0.3722907046147206 1.0000000000276743e-15 14.999999999987981 -0.7778608633397658 RLQT(ph)PKEK ddPTM_A549_PD325901_60min_R1 2 RLQTPKEK 8 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RLQT(1)PKEK;RLQT(1)PKEK 60.518 0.0038917 32684000.0 5932.4 6059.299999999999 7645.5 7453.8 7615.6 9603.900000000001 8224.2 9997.9 8728.900000000001 7146.7 7481.8 True False 6534.652880797939 6569.938476115199 8164.369606126352 7914.204297191964 7080.7065283937245 9525.689022562894 8537.176431454924 9798.484041299183 8362.054688567421 6695.456142336544 6561.586031037864 0.9958953292523295 1.0012729308185286 1.2442677071529566 1.2061419692976505 1.0791150942623167 1.4517357507017536 1.3010842791776327 1.4933103056105674 1.2743953442068596 1.0204020964848197 1.0 12.679828862089291 -5.7521487407554215 24.2838916680763 1.1966244801347847 0.9985839387570293 0.23267445191297986 0.152543079145721 191.59755646611745 500781.2411622697 0.023984003434897313 0.09022813669587035 1.7695028206082305e-06 5.7521487407554215 -0.1980405413777554 RLRS(ph)PSKK ddPTM_A549_MK2206_60min_R1 1 RLRSPSKK 8 3 A0A494C0X1;Q9P2K1-2;Q9P2K1;D6R9V3;A0A494C1C5 A0A494C0X1 CC2D2A Coiled-coil and C2 domain-containing protein 2A 1 RLRS(0.998)PS(0.002)KK 44.309 0.017893 13087000.0 3041.2 2674.7 2496.4 2148.6 3989.4 3055.5 2600.2 3384.3 3863.1 4465.6 4395.2 True False 3554.4802097986576 2810.8308054326076 2850.4270580854695 2675.0070964543206 3402.564544726223 3378.830981923252 3072.622682466036 3864.0348889840716 2988.114018103059 3456.8178585061064 3303.750538651019 1.0758924344360505 0.850799953733892 0.8627851966236381 0.8096879789073222 1.029909645089472 1.0227258209703962 0.9300407662500583 1.1695903924277005 0.9044611519982257 1.046331379462321 1.0 11.68988903974924 -6.775357475481621 24.99937990425311 0.9780664887122258 0.8936486815929059 0.19833069561130867 0.09404048726282581 332.15430134596494 596608.3053533211 0.013335934695695743 0.02529237740691463 1.6774227333530472e-07 6.775357475481621 -0.0844178071193199 RLS(ph)ADIR ddPTM_A549_MK2206_60min_R1 2 RLSADIR 7 1 O60307;V9GYV0 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 RLS(1)ADIR;RLS(1)ADIR 54.982 0.046538 2938400.0 115.02 284.94 249.97 101.14 309.84 215.5 100.65 134.47 292.95 200.09 262.13 True False 134.43256403098826 299.44222892285774 285.41950477071987 125.91930454034711 264.26294644256603 238.30406696267733 118.93680216529746 153.5315342971037 226.59729274502118 154.8895300314597 197.0358865800399 0.6822745153907742 1.5197344713203722 1.4485660948609826 0.6390678709646945 1.3411919576143667 1.209444995523054 0.603630151997631 0.7792059454851445 1.1500305689388866 0.7860980693409904 1.0 7.622314604613589 RLS(ph)AEGGDK ddPTM_A549_MK2206_60min_R1 3 RLSAEGGDK 9 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 RLS(1)AEGGDK;RLS(1)AEGGDK;RLS(1)AEGGDK 89.46 0.00045571 89792600.0 10008.8 9995.2 8328.699999999999 7845.4 10746.9 8547.7 8120.2 8412.0 11697.9 11705.0 11267.0 True False 11698.040748333811 10503.912987049014 9509.834897723307 9767.523352193386 9166.04524633234 9452.211940495945 9595.5352304287 9604.426760669565 9048.344327707742 9060.832370524451 8469.09294661927 1.3812625297734495 1.2402642234835801 1.1228870621285938 1.1533139869591853 1.0822936179949805 1.1160831508253928 1.1330062488284638 1.1340561287030746 1.0683959173360709 1.0698704604654734 1.0 13.047991747550334 -2.0000000000000004 0.2609483571142818 1.0245709778984677 3.1353149615143376 0.7892416560303205 0.04425668264636688 14.023596205370414 0.17216163742656534 0.020223247270446363 13.397984707529096 0.00999999999999999 2.0000000000000004 2.11074398361587 RLS(ph)AEGGDK ddPTM_A549_PD325901_60min_R1 3 RLSAEGGDK 9 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 RLS(1)AEGGDK;RLS(1)AEGGDK;RLS(1)AEGGDK 139.19 1.767e-05 167836000.0 17955.6 17431.8 16609.1 17568.3 19974.0 18709.899999999998 18763.1 21101.2 21705.199999999997 24539.5 26307.9 True False 19778.43929378592 18900.83896290741 17736.29340463191 18653.45399049581 18571.095146559208 18557.53277764757 19477.140038062287 20680.320012428845 20793.005925866204 22990.071782062732 23072.195079518453 0.8572413342388713 0.8192041935223572 0.7687302115600042 0.8084819812855506 0.8049123667060643 0.8043245436200989 0.8441823576358561 0.896330840700419 0.9012148975943983 0.9964405945263256 1.0 14.4938676475359 -9.123284896417402 0.48117543039444793 0.9952029695568158 0.8013591545489632 0.8903770028288596 0.02447776050109943 0.1913829579606939 0.10655973843533746 0.013252656561496922 0.009392403188690572 7.528615258686851e-10 9.123284896417402 -0.19384381500785253 RLS(ph)AEK ddPTM_A549_MK2206_60min_R1 2 RLSAEK 6 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RLS(1)AEK;RLS(1)AEK 82.426 0.017436 44087000.0 7642.9 7255.400000000001 5059.9 3082.2 2986.9 2360.34 1893.76 2447.33 2622.58 7028.0 7136.6 True False 8932.834669035301 7624.668869680995 5777.469905146083 3837.3391383652133 2547.530966722504 2610.1096121331143 2237.831678773509 2794.2465221337907 2028.569817399684 5440.369918842015 5364.385259860043 1.665211247200459 1.4213499777381617 1.0770050295188562 0.7153362319218156 0.4748970932018722 0.4865626694756096 0.41716460887298273 0.520888487082058 0.37815513225323594 1.0141646535998337 1.0 12.389197137215877 -5.901453940954796 1.6712450618240986 0.631784355808347 1.6476120238592527 0.757530400971415 0.20455673323576243 0.18991555461147588 0.9541813754481284 0.03682925510983655 0.2083799916114337 1.2547177997361897e-06 5.901453940954796 1.0158276680509055 RLS(ph)AEK ddPTM_A549_PD325901_60min_R1 2 RLSAEK 6 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RLS(1)AEK;RLS(1)AEK 73.665 0.019589 57934000.0 4359.3 4112.2 4974.2 4147.3 4362.700000000001 3648.8999999999996 3358.8 3404.6000000000004 3713.6000000000004 5196.200000000001 5681.9 True False 4801.852926852956 4458.7495257671535 5311.779124294518 4403.469301798307 4056.2790024979417 3619.1845681889404 3486.620972005882 3336.6925821429672 3557.530306391869 4868.11104521096 4983.062320531694 0.9636349332955156 0.8947810079347761 1.0659668257425585 0.8836873830886497 0.8140132997704784 0.7262972717151914 0.6996944344123431 0.6696068336120952 0.7139245061683835 0.9769315999025135 1.0 12.282816901822162 -6.510152762475701 5.658007486506101 0.8213953276428654 0.9687241759119304 0.3222807437460623 0.10854767054372057 0.22257409095642433 24.556305730765843 0.01945006637920943 0.04362187521485107 3.089208616577923e-07 6.510152762475701 0.147328848269065 RLS(ph)AGLYR ddPTM_A549_MK2206_60min_R1 2 RLSAGLYR 8 1 H0Y4C5;B8ZZS2;Q13506-2;Q13506 H0Y4C5 NAB1 NGFI-A-binding protein 1 1 RLS(1)AGLYR;RLS(1)AGLYR 94.465 0.00106 19618500.0 1200.8899999999999 1201.99 1228.82 893.22 1237.12 1169.83 1200.47 786.66 1810.5900000000001 1556.0300000000002 1611.06 True False 1403.5708730583672 1263.1661568856107 1403.085153627859 1112.05894009817 1055.141286802955 1293.6206341296922 1418.5798598646259 898.1714640452115 1400.4942559181022 1204.5217422902308 1210.9893390059856 1.1590282654432433 1.0430861083570342 1.1586271723742432 0.9183061355527536 0.8713051823140283 1.068234535567037 1.1714222530059897 0.7416840389218092 1.1564876839193874 0.99465924553798 1.0 10.241970448925628 -5.012943657504886 1.2990527298681367 1.0389251247113565 1.2627606360130454 0.06697060627536744 0.12813185355559467 5.829139084003902 5.525167330010947 0.01875754023961911 2.010487204806859 9.706358829604995e-06 5.012943657504886 0.223835511301689 RLS(ph)AGLYR ddPTM_A549_PD325901_60min_R1 2 RLSAGLYR 8 1 H0Y4C5;B8ZZS2;Q13506-2;Q13506 H0Y4C5 NAB1 NGFI-A-binding protein 1 1 RLS(1)AGLYR;RLS(1)AGLYR 93.096 0.0010744 38320000.0 1357.58 1553.01 1513.23 1486.1599999999999 1362.8 1405.6 1409.15 1091.49 1609.25 1567.8400000000001 1357.81 True False 1495.4005222024252 1683.88760298907 1615.9268875912092 1577.9567278857508 1267.0816294047715 1394.153259625195 1462.7759743664672 1069.71937569266 1541.6188188176193 1468.8463148307524 1190.8079778667593 1.2557864491984005 1.4140714827974405 1.3570003876578134 1.325114340191555 1.0640520159049074 1.1707624449432334 1.228389464594382 0.8983139142290428 1.294599001242258 1.2334871298578947 1.0 10.217725076777493 -2.0000000016345454 0.02433357311163609 7.650399055866174e-12 2.896900443087673 0.21417128764100146 0.1337236645351903 1475.1724651682166 2.68556089198166 110.09341727669226 230.43891504123968 0.009999999962363202 2.0000000016345454 2.8969004430800225 RLS(ph)AHVR ddPTM_A549_MK2206_60min_R1 2 RLSAHVR 7 1 Q969F2;Q969F2-2 Q969F2 NKD2 Protein naked cuticle homolog 2 1 RLS(1)AHVR;RLS(1)AHVR 63.216 0.011165000000000001 9682000.0 1363.4099999999999 1093.3600000000001 1001.48 1105.0700000000002 1529.62 1203.71 1154.55 1105.6599999999999 1659.4099999999999 1839.53 1581.8899999999999 True False 1593.5202758258536 1149.0073538818544 1143.5049231418989 1375.8121996084772 1304.614924275362 1331.0857932419685 1364.3167902627345 1262.3906909417394 1283.5562845332497 1423.9788953909308 1189.06305505703 1.3401478324035767 0.9663132236723524 0.9616856888107199 1.1570557118541458 1.0971789248071373 1.1194408804318008 1.1473880922129054 1.0616684166351402 1.0794686447235446 1.1975638208039638 1.0 10.21560950673138 -10.177997736706722 0.5672358996808328 0.9956149131603831 1.1009830708058972 0.0 0.1124700578859387 1.4888740786693435 0.8734614797301113 0.07532013351678114 0.02209325874423434 6.637465294583941e-11 10.177997736706722 0.1053681576455141 RLS(ph)AHVR ddPTM_A549_PD325901_60min_R1 2 RLSAHVR 7 1 Q969F2;Q969F2-2 Q969F2 NKD2 Protein naked cuticle homolog 2 1 RLS(1)AHVR;RLS(1)AHVR 71.34899999999999 0.008607799999999999 20483600.0 2276.76 2576.4 2356.7 2167.9 2856.8 2917.6 2631.0 3042.9 2693.8500000000004 2731.4 2318.48 True False 2507.8949991378754 2793.522269876587 2516.639833988358 2301.8062593418736 2656.1482234249697 2893.8400329271963 2731.124144738444 2982.206972391131 2580.6368526157207 2558.938937856361 2033.321658055637 1.2333980652800645 1.3738713001010825 1.2376988284258448 1.1320423653692722 1.3063099057160048 1.4232081881695144 1.3431835213667473 1.4666675882668092 1.2691729527356008 1.2585017858430452 1.0 10.989622742724524 -10.241027526435882 0.8502571076130739 1.0139111324254608 1.3107141500651907 0.16335347857164217 0.11489591839645234 0.29907268121485386 0.4198160741433782 0.048832694619696464 0.01888406006197069 5.740800747333199e-11 10.241027526435882 0.2968030176397298 RLS(ph)APLPSSCGDPEK ddPTM_A549_MK2206_60min_R1 2 RLSAPLPSSCGDPEK 15 1 H0YKX0;Q96EP0-3;Q96EP0 H0YKX0 RNF31 E3 ubiquitin-protein ligase RNF31 1 RLS(1)APLPSSCGDPEK;RLS(1)APLPSSCGDPEK 115.42 4.2821000000000005e-07 24858000.0 5035.5 5486.6 4389.3 5051.7 6176.1 4676.6 4636.2 5178.0 8114.0 6935.700000000001 8046.6 True False 5885.369293844911 5765.844504836635 5011.768741409455 6289.366726779431 5267.6038714302 5171.474707924164 5478.537528055164 5911.99735695994 6276.191955395471 5368.92055294715 6048.407145137718 0.9730444979346551 0.9532831316542185 0.8286096853513556 1.0398385187801749 0.870907619978063 0.8550143176260027 0.9057818689436824 0.9774469897768974 1.0376602971314304 0.8876585891317182 1.0 12.56233954169807 -8.45636386014351 3.7060696685072734 1.0176042507507603 0.9167467789146028 0.053992977405648235 0.06819763626488541 0.17238238602338013 4.647439727748073 0.009143653388449715 0.010960094313345136 3.4965209912469002e-09 8.45636386014351 -0.10085747183615756 RLS(ph)APLPSSCGDPEK ddPTM_A549_PD325901_60min_R1 2 RLSAPLPSSCGDPEK 15 1 H0YKX0;Q96EP0-3;Q96EP0 H0YKX0 RNF31 E3 ubiquitin-protein ligase RNF31 1 RLS(1)APLPSSCGDPEK;RLS(0.998)APLPS(0.002)SCGDPEK 120.9 2.2823e-07 43173000.0 5644.2 5657.700000000001 6173.299999999999 5753.5 6568.9 5934.2 6291.7 6530.0 6930.5 6554.3 8132.200000000001 True False 6217.19502895957 6134.494234699876 6592.257261068576 6108.880627853441 6107.523125474759 5885.873842677737 6531.134086450345 6399.754027314101 6639.23518646296 6140.460379436165 7131.990954263168 0.8717334428534607 0.8601376914300438 0.9243221567924221 0.8565463230434751 0.8563559831527786 0.8252778053734686 0.9157518746636018 0.8973306427833634 0.9309090868229913 0.8609742242824477 1.0 12.800089157808962 -9.294008160066097 0.5829731292404515 0.993913197402213 0.8676663020108154 0.0 0.04705137159079725 0.23894141727464813 0.18393666403715417 0.011431601987988689 0.007554327942773845 5.081498947172047e-10 9.294008160066097 -0.12624689539139755 RLS(ph)AQAHPAGK ddPTM_A549_PD325901_60min_R1 2 RLSAQAHPAGK 11 1 H7C3T2;Q2TAZ0;Q2TAZ0-3 H7C3T2 ATG2A Autophagy-related protein 2 homolog A 1 RLS(1)AQAHPAGK;RLS(1)AQAHPAGK 45.115 0.010740000000000001 14329500.0 3543.0 3148.8 3429.1 3237.6 3593.5 4303.6 3752.7000000000003 4153.4 4173.6 3874.5 3846.3 True False 3902.6827517812526 3414.1604267145626 3661.8193468534296 3437.5791988769083 3341.104956901999 4268.552908454034 3895.5110520562353 4070.5571787207305 3998.198106084959 3629.863408773692 3373.2294837045815 1.156957381830782 1.0121340523103188 1.085552988476761 1.0190765898030916 0.9904766257505544 1.2654202535210208 1.154831318436737 1.2067240602469544 1.1852730818936215 1.0760795926600486 1.0 11.719914754141948 RLS(ph)AQFENLMAESR ddPTM_A549_MK2206_60min_R1 2 RLSAQFENLMAESR 14 1 Q9H7C4-2;Q9H7C4 Q9H7C4-2 SYNC Syncoilin 1 RLS(1)AQFENLMAESR;RLS(1)AQFENLMAESR 104.61 9.6336e-06 7262500.0 350.36 828.53 657.9300000000001 233.99 633.6600000000001 515.45 460.78999999999996 549.4200000000001 716.6700000000001 708.3 605.35 True False 409.4922025204055 870.6986380622417 751.2343672192657 291.3175605042103 540.4494534043264 569.9945768719816 544.5095784376292 627.301967528183 554.3453892868215 548.2945380642855 455.0248881899333 0.8999336369255436 1.9135187121870152 1.6509742361734083 0.6402233549533022 1.1877360281416867 1.252666813763511 1.1966588917886705 1.3786102338787654 1.21827487611058 1.2049770293782704 1.0 8.829801647363444 -14.999999986175025 0.06762732381059477 0.044336311600510214 1.6315183907015882 0.019638759872162015 0.3243399642144663 378.12644360181304 1.918333736070371 57.75857128838493 8.304787226308203 1.0000000318331817e-15 14.999999986175025 1.587182079101078 RLS(ph)AQFENLMAESR ddPTM_A549_PD325901_60min_R1 3 RLSAQFENLMAESR 14 1 Q9H7C4-2;Q9H7C4 Q9H7C4-2 SYNC Syncoilin 1 RLS(1)AQFENLMAESR;RLS(1)AQFENLMAESR;RLS(1)AQFENLMAESR 130.0 4.231399999999999e-09 19780600.0 1724.65 1856.12 1478.2600000000002 1792.96 2172.06 1854.8700000000001 1587.19 1711.8400000000001 1845.93 2114.59 2054.9700000000003 True False 1899.7351983797748 2012.541746453707 1578.583613099515 1903.7070670923977 2019.5019988002111 1839.7645537001881 1647.5913839936936 1677.6960082874994 1768.3519814944914 1981.074426521813 1802.2217175281196 1.0541073719749656 1.1167004186444145 0.8759097716704132 1.056311245490634 1.1205624586358374 1.0208314192459966 0.914200160817886 0.9309043343393861 0.9812066763460807 1.0992401252599502 1.0 10.815560793650114 -7.533656689931851 24.873563839542395 0.9796297705878628 1.0430544601470404 0.12537323142561918 0.07449572588840413 275.17115474076417 635043.8244612888 0.010000838861182052 0.01484120272341118 2.926464836064107e-08 7.533656689931851 0.06342468955917757 RLS(ph)AQGQAISVVGSLSSMSPLEEEAPQAK ddPTM_A549_PD325901_60min_R1 2 RLSAQGQAISVVGSLSSMSPLEEEAPQAK 29 1 Q92797;M0R3C7;A0A087WUE9;Q92797-2 Q92797 SYMPK Symplekin 1 RLS(0.432)AQGQAIS(0.134)VVGS(0.134)LS(0.134)S(0.134)MS(0.033)PLEEEAPQAK;RLS(0.985)AQGQAIS(0.009)VVGS(0.003)LS(0.001)S(0.001)MS(0.001)PLEEEAPQAK 61.776 0.00024209999999999998 5656600.0 744.96 838.82 795.01 640.47 1177.0 1093.9 738.31 716.82 1016.9 1019.3 1166.0 True False 820.5877907894336 909.510305239046 848.9641593834954 680.0303772870936 1094.3315804295685 1084.9916410813892 766.406791068734 702.5224627655888 974.163229365007 954.9412240451732 1022.5893918829901 0.8024606917527357 0.8894188737517403 0.8302102154807394 0.6650082454257517 1.0701573760847183 1.0610237595790937 0.749476571097102 0.6870034721091406 0.9526435899859949 0.9338462061363164 1.0 9.998011249676772 -8.97581879107232 24.510069086279927 0.9791076087935084 0.8490380971896749 0.14940504525285203 0.12450118569322138 172.42461221435607 174771.74252203677 0.022464854396751773 0.023242374396339936 1.0572585572437857e-09 8.97581879107232 -0.1300695116038335 RLS(ph)ASSTGSTR ddPTM_A549_PD325901_60min_R1 1 RLSASSTGSTR 11 1 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 RLS(0.918)AS(0.056)S(0.024)T(0.002)GSTR 75.736 0.0010392 57013000.0 7280.9 6417.9 5610.8 6311.3 6972.2 6041.0 5592.4 6318.5 6455.4 8294.1 9547.4 True False 8020.051608084707 6958.758956622012 5991.582628481299 6701.134666997726 6482.496724784222 5991.804098887167 5805.221842278701 6192.472560732637 6184.101987258206 7770.409110520043 8373.130325955111 0.9578319333241563 0.8310821264839486 0.7155725989249843 0.8003141484882282 0.7742022962057231 0.7155990490574013 0.6933155959944416 0.739564812640877 0.7385651180047521 0.9280172179373887 1.0 13.031551365196979 -10.701058897811691 0.9254071733454416 1.0021231656274328 0.7690259131451742 0.49474024206360045 0.07273803993485815 0.3314065978389863 0.49746722079353917 0.0518920353215275 0.013094514658375682 1.9904033877020696e-11 10.701058897811691 -0.23309725248225854 RLS(ph)DEHEPEQR ddPTM_A549_MK2206_60min_R1 4 RLSDEHEPEQR 11 1 Q9UK59-2;Q9UK59 Q9UK59-2 DBR1 Lariat debranching enzyme 1 RLS(1)DEHEPEQR;RLS(1)DEHEPEQR;RLS(1)DEHEPEQR;RLS(1)DEHEPEQR 107.46 3.0445e-05 320494000.0 3163.3999999999996 2770.3599999999997 2873.7400000000002 2853.9170000000004 4326.66 2740.22 2130.12 3071.81 4040.16 4345.2 4468.849999999999 True False 3697.304582295498 2911.3594908357118 3281.2795441045273 3553.126793117204 3690.2140454918435 3030.1882615891786 2517.1352312801146 3507.248474523583 3125.0702108097807 3363.6163021275356 3359.111211014425 1.1006794208456532 0.866705300285817 0.9768296843954765 1.0577580109484341 1.0985685836752717 0.9020803632976729 0.7493456075602688 1.0441001366740763 0.9303265103467754 1.0013411556897367 1.0 11.713863844724838 -7.287827693826051 24.923250340004355 0.9505396127754047 1.0112731442236722 0.14997542751240744 0.09384592575125912 1442.4694236311082 1362380.6735949484 0.014160073848449962 0.02264152043423873 5.154331019111083e-08 7.287827693826051 0.06073353144826754 RLS(ph)DEHEPEQR ddPTM_A549_PD325901_60min_R1 4 RLSDEHEPEQR 11 1 Q9UK59-2;Q9UK59 Q9UK59-2 DBR1 Lariat debranching enzyme 1 RLS(1)DEHEPEQR;RLS(1)DEHEPEQR;RLS(1)DEHEPEQR;RLS(1)DEHEPEQR 119.65 3.9311e-06 426215000.0 3711.7799999999997 4037.0899999999997 4270.81 4149.22 4883.89 4425.18 4761.87 4698.84 4402.48 5156.549999999999 5060.04 True False 4088.5971731319846 4377.309742468586 4560.652849066836 4405.507895837672 4540.86241490583 4389.142801243751 4943.085568645249 4605.117950031333 4217.459075636596 4830.964552977669 4437.687158236366 0.9213351521509423 0.9863943956356367 1.0277094095292962 0.9927486410710658 1.0232497814718575 0.9890608879667157 1.1138877961396765 1.0377292913684135 0.9503732293992322 1.088622154000058 1.0 12.11559225071675 -3.6700786544445414 15.384268055199755 0.9934393826289838 0.5067432747152997 0.0 0.05621250783690809 0.0 0.0 0.006714987824592483 0.0 0.00021375749213458335 3.6700786544445414 -0.4866961079136841 RLS(ph)DISPQLR ddPTM_A549_MK2206_60min_R1 2 RLSDISPQLR 10 1 Q8IY50-2 Q8IY50-2 1 RLS(0.999)DIS(0.001)PQLR;RLS(1)DISPQLR 72.705 0.00083881 5293600.0 301.58 491.97 274.21 401.03 614.64 436.91999999999996 406.19 541.96 756.55 595.61 540.79 True False 352.47933107690363 517.0091716262309 313.097101264868 499.2823680029211 524.2272702086842 483.1545843959767 479.98946519147717 618.7844896828905 585.1926329620954 461.06128733089 406.4969179552886 0.867114399907144 1.2718649239133906 0.7702324112068819 1.228256220279235 1.2896217586238747 1.1885811750462518 1.18079484490525 1.5222366083251626 1.4395991878749297 1.134230708685479 1.0 8.66710060365565 -6.458070073389487 20.959070167986855 1.2382589129732524 0.9998294558524974 0.32638759676518136 0.17619976737949283 47.12219288970227 15238.336783669718 0.029064523608673024 0.06753958850705918 3.4828111536444653e-07 6.458070073389487 -0.23842945712075503 RLS(ph)DISPQLR ddPTM_A549_PD325901_60min_R1 2 RLSDISPQLR 10 1 Q8IY50-2 Q8IY50-2 1 RLS(0.999)DIS(0.001)PQLR;RLS(1)DISPQLR 87.719 0.00030065 9473000.0 642.92 668.9100000000001 724.05 788.72 889.6600000000001 656.24 753.46 532.13 822.1 751.69 1017.24 True False 708.1887651073108 725.281393239849 773.1883870663513 837.4374430869148 827.1733507603822 650.8957990156787 782.133332609132 521.5162497020904 787.5499959297597 704.2281651157824 892.1259288156535 0.7938215247789856 0.812980959092513 0.8666807701607795 0.9386986926819393 0.9271934869761049 0.7296008085761825 0.876707320509625 0.5845769446410239 0.8827789558535484 0.7893820170104059 1.0 9.801103559174638 -9.695380634409817 1.3265551512851375 0.9749268149451451 0.8248732757747783 0.0 0.11056171793144842 0.3412550368197773 1.218246461006418 0.0256454307836775 0.0182459814424671 2.0165981553528577e-10 9.695380634409817 -0.1500535391703668 RLS(ph)DKGLK ddPTM_A549_MK2206_60min_R1 4 RLSDKGLK 8 2 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 RLS(1)DKGLK;RLS(1)DKGLK;RLS(1)DKGLK;RLS(1)DKGLK 79.741 0.00089446 138321000.0 12525.5 18153.300000000003 18368.6 15953.0 16239.699999999999 12085.199999999999 11410.8 7803.1 19684.8 24228.200000000004 25114.1 True False 14639.498180926312 19077.225430986575 20973.543686568162 19861.48571615737 13850.861642600497 13364.04784249349 13483.99465621239 8909.213320991521 15226.224230166214 18755.03279278432 18877.5758561011 0.7754967212167196 1.0105760176204484 1.1110295011628657 1.0521205618537233 0.7337203541483318 0.7079324137995359 0.7142863447614995 0.4719468955603283 0.8065773034753934 0.9935085381591953 1.0 14.204385893988462 -4.9280157251797645 12.621533259214864 0.87121838342087 0.00016357460267906853 0.0139291482887004 0.18463403260252176 2635118.705287769 13566403.77053353 0.027307539192889727 57634425.483969435 1.180277898709577e-05 4.9280157251797645 -0.871054808818191 RLS(ph)DKGLK ddPTM_A549_PD325901_60min_R1 4 RLSDKGLK 8 2 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 RLS(1)DKGLK;RLS(1)DKGLK;RLS(1)DKGLK;RLS(1)DKGLK 89.805 0.00054459 290170000.0 14083.3 13963.2 18431.800000000003 19211.699999999997 17696.6 29513.6 25993.699999999997 24614.8 22989.1 18544.7 21646.5 True False 15513.026248422506 15139.927867854656 19682.6927874174 20398.363076063597 16453.651865955722 29273.25102680288 26982.904477798427 24123.83850406296 22022.948073748725 17373.784477141704 18984.117728469242 0.8171581355692202 0.7975049504223362 1.0367978680357923 1.0744962377405352 0.8667061646631729 1.5419863828016456 1.4213409790086755 1.270737932049695 1.1600722450600034 0.9151747121272522 1.0 14.212505331978193 -5.941625371354758 1.208590130404297 1.140982771663783 0.7665971406970583 0.3264576091179222 0.19207885293188615 0.6473664037684964 1.4839701130744825 0.030141761530630026 0.22217251320453998 1.1438646233554833e-06 5.941625371354758 -0.3743856309667247 RLS(ph)DLR ddPTM_A549_MK2206_60min_R1 1 RLSDLR 6 1 Q15424-2;Q15424;Q15424-4;Q15424-3;K7ES42;Q3SYC2-3 Q15424-2 SAFB Scaffold attachment factor B1 1 RLS(1)DLR 59.368 0.053319000000000005 5210100.0 1717.3 1885.0 1221.9 1246.6 2045.7 1900.6 1704.7 1299.2 2100.8 2887.9 2624.7 True False 2007.1382560460454 1980.9384485140274 1395.1837935725998 1552.0170559619996 1744.7802399224026 2101.720230483827 2014.4219240057873 1483.365578633132 1624.9721542882426 2235.521384266344 1972.9145519651734 1.0173467746217304 1.0040670268972682 0.7071688898958601 0.7866620753626011 0.8843668562252067 1.065287003124567 1.0210386060558323 0.7518650907387685 0.8236404119325119 1.1331060344400592 1.0 10.946112758145949 -5.563905452040396 24.99956654106776 0.8983088375149161 1.0140294560068577 0.08170744888489301 0.12955908704545077 205.52027693411253 125233.03898200937 0.016482552202417296 0.06383680975980043 2.7295719588336805e-06 5.563905452040396 0.1157206184919416 RLS(ph)DLR ddPTM_A549_PD325901_60min_R1 1 RLSDLR 6 1 Q15424-2;Q15424;Q15424-4;Q15424-3;K7ES42;Q3SYC2-3 Q15424-2 SAFB Scaffold attachment factor B1 1 RLS(1)DLR 76.825 0.036152 13393000.0 1621.5 1478.0 1403.6 1399.6 1224.2 1521.2 1785.9 1547.6 1510.3 1586.0 1737.9 True False 1786.1134863147897 1602.556247041451 1498.8567365324636 1486.0501132777738 1138.216415260728 1508.811851552252 1853.8634017819772 1516.7319039312872 1446.8273432097253 1485.8596893315475 1524.149317455788 1.1718756593325712 1.0514430762706013 0.9834054441821065 0.9750029713351105 0.7467879965728784 0.9899370319378299 1.2163266292547834 0.9951334075739493 0.9492687669373933 0.9748780334802394 1.0 10.573788531981876 -5.364034291566572 2.0966214687243 0.9786576675924041 1.2021251909996058 0.2379068402402258 0.10093993072099385 0.6108610247416565 3.459927624617849 0.014247646210423933 0.236059848851058 4.324796814155257e-06 5.364034291566572 0.22346752340720166 RLS(ph)EDSSR ddPTM_A549_PD325901_60min_R1 3 RLSEDSSR 8 1 Q9NYP9 Q9NYP9 MIS18A Protein Mis18-alpha 1 RLS(0.949)EDS(0.004)S(0.047)R;RLS(0.727)EDS(0.267)S(0.006)R;RLS(0.996)EDS(0.003)S(0.001)R 68.355 0.0031690999999999998 24699100.0 1939.8600000000001 2073.43 1959.73 1831.73 2158.6800000000003 2022.82 1930.4 2059.44 2514.33 2476.07 2391.43 True False 2136.793159150545 2248.165222803219 2092.7290626138265 1944.8718019393389 2007.0617638417175 2006.3468245838344 2003.862428355412 2018.3628536005742 2408.6614539181032 2319.7305176312507 2097.299270523789 1.0188308312417869 1.0719334404964305 0.9978209080724941 0.9273220227905853 0.9569744251808493 0.9566335395152072 0.9554489702630558 0.9623628263106673 1.1484586333339797 1.1060560360810647 1.0 11.034317023681114 -8.733091601198765 24.9998106329724 1.0701054885074948 0.9802704544033353 0.4554976041580635 0.049895541809725344 200.50794897651627 176827.23846348593 0.011051757487595201 0.012530440381241506 1.848878613195668e-09 8.733091601198765 -0.0898350341041595 RLS(ph)EGR ddPTM_A549_MK2206_60min_R1 1 RLSEGR 6 1 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 1 RLS(1)EGR 62.107 0.049554 36441000.0 1369.8 1319.9 1154.8 1031.0 1147.0 1045.7 751.78 841.57 1042.6 1940.5 1944.4 True False 1600.9887516053536 1387.07727225128 1318.5680045974605 1283.5950462833496 978.2778194217117 1156.3552799205177 888.3686948020596 960.8651247000345 806.4527646900809 1502.1397022642202 1461.5518172900074 1.0954033464060744 0.9490441979834712 0.9021698642490378 0.8782412166975898 0.6693418651660419 0.7911832247348016 0.6078256578335092 0.6574280250163552 0.5517784283456992 1.027770404370247 1.0 10.513285263461965 -5.830367658434893 1.0738722500912605 0.7546309443896336 1.1017236120929188 0.3395065621036081 0.1437255808754821 0.8601997047965927 1.3581558731720158 0.02636147460460344 0.26890688730095735 1.4778567568930704e-06 5.830367658434893 0.3470926677032852 RLS(ph)EGR ddPTM_A549_PD325901_60min_R1 2 RLSEGR 6 1 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 1 RLS(1)EGR;RLS(1)EGR 84.743 0.032412 304720000.0 5019.5 4938.0 5469.6 5122.1 6323.8 5650.9 4717.4 5476.1 5939.8 6193.0 7490.299999999999 True False 5529.075944839406 5354.142589912508 5840.799947376721 5438.480483866881 5879.63810392566 5604.88094394992 4896.923238460332 5366.874889582659 5690.170862210909 5801.972923096005 6569.040584923804 0.8416869820425289 0.8150570118565665 0.8891404873919606 0.8278957046404004 0.895052790116665 0.8532267188017278 0.7454548613535674 0.8169952400507069 0.8662103375141365 0.8832298793238926 1.0 12.681466963513278 -10.17536640821819 0.7526502167567917 0.9956838641826576 0.8373132381539359 0.3063662267201448 0.05059543191461528 0.27707259054585276 0.30381624481114017 0.022957126097434107 0.00852050613512019 6.677802828933743e-11 10.17536640821819 -0.15837062602872176 RLS(ph)EGVEPWR ddPTM_A549_MK2206_60min_R1 2 RLSEGVEPWR 10 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 RLS(1)EGVEPWR;RLS(1)EGVEPWR 123.28 1.2597e-05 8768900.0 1167.04 1019.29 1021.0999999999999 957.5699999999999 1481.58 1073.99 880.72 899.64 1429.6999999999998 1494.48 1467.01 True False 1364.0078206114115 1071.1675072604048 1165.9073341656283 1192.1746929869503 1263.6415446371584 1187.6389089431361 1040.7354237756665 1027.1667250319504 1105.8752327617574 1156.875930038562 1102.710929583734 1.2369586480169517 0.9713946588565722 1.0573100373692228 1.081130748778366 1.1459408905234798 1.0770174458971418 0.9437971419840168 0.9314922863961265 1.0028695672575023 1.049119854534565 1.0 10.10683892952264 -7.657960494478306 6.957887938084713 0.9912184384945963 1.090319203445669 0.3973532691744247 0.06697657532018599 0.18246230696660426 10.918575699734307 0.009438262014288983 0.014014329489408275 2.198059809817761e-08 7.657960494478306 0.09910076495107267 RLS(ph)EGVEPWR ddPTM_A549_PD325901_60min_R1 2 RLSEGVEPWR 10 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 RLS(1)EGVEPWR;RLS(1)EGVEPWR 132.97 3.9016e-07 9370500.0 807.8899999999999 963.98 695.28 513.756 554.8199999999999 657.23 665.54 451.76 912.69 1068.53 1125.42 True False 889.9063980628157 1045.217977688104 742.4658818582867 545.4895412954677 515.8513572250916 651.8777367839123 690.8674888974621 442.749292401136 874.3328132649706 1001.0628334435296 987.0004746251749 0.9016271227232876 1.0589842705851158 0.7522447060020381 0.5526740415222432 0.5226455006731302 0.6604634481371152 0.6999667240887875 0.44858062765296575 0.8858484223090255 1.0142475704722382 1.0 9.946906968214474 -8.969873638152018 15.408236261409517 0.9496557787866403 0.6991488993374807 0.34847347088373803 0.16428767005028996 2.654040790442715 1357.2238192565273 0.031195496615709657 0.032702546055046966 1.071831118684259e-09 8.969873638152018 -0.2505068794491596 RLS(ph)ELLR ddPTM_A549_PD325901_60min_R1 1 RLSELLR 7 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 RLS(1)ELLR 84.213 0.01138 7140200.0 935.06 1011.0 1240.6 950.19 1068.1 831.08 1145.8 1329.9 999.38 1034.5 1282.6 True False 1029.9866028452095 1096.2005181048087 1324.7945763338378 1008.881078261938 993.0803407449624 824.311960023696 1189.4040460058186 1303.3741012136327 957.3795340375661 969.1814934511249 1124.8483310712888 0.9156670943044077 0.9745318438271616 1.1777539600135452 0.8969040984406268 0.882857104654427 0.7328205387820005 1.0573905949374063 1.1587109703690617 0.8511187753870534 0.8616108204810962 1.0 10.135514773426706 RLS(ph)EQLAHTPTAFK ddPTM_A549_MK2206_60min_R1 4 RLSEQLAHTPTAFK 14 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RLS(0.997)EQLAHT(0.003)PTAFK;RLS(0.997)EQLAHT(0.003)PTAFK;RLS(0.992)EQLAHT(0.008)PTAFK;RLS(0.992)EQLAHT(0.008)PTAFK 84.035 1.2954000000000002e-05 13621500.0 2786.6 3492.78 3520.59 2977.26 4702.700000000001 3354.63 2756.34 3291.89 3968.0800000000004 4724.25 4524.4 True False 3256.90995417103 3670.5475831304116 4019.8626007150824 3706.688833654281 4010.93905962902 3709.6147199768284 3257.131299357138 3758.5254884903156 3069.316215721671 3657.0386438658793 3400.8666129124176 0.9576705954315254 1.079297720526312 1.1820112513241359 1.0899247913989678 1.1793873492127795 1.0907851269121098 0.9577356803676024 1.1051669813276235 0.9025100261410091 1.0753255155556019 1.0 11.7316867071549 -8.753303632201261 24.99783655778721 0.9539630667336091 1.0835026900973206 0.14719797058188877 0.08012821501207633 138.44851398864208 425395.53248681047 0.012904828135178405 0.014509454536282137 1.7648035463198402e-09 8.753303632201261 0.1295396233637115 RLS(ph)EQLAHTPTAFK ddPTM_A549_PD325901_60min_R1 4 RLSEQLAHTPTAFK 14 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RLS(0.992)EQLAHT(0.008)PTAFK;RLS(1)EQLAHTPTAFK;RLS(0.971)EQLAHT(0.029)PTAFK;RLS(0.999)EQLAHT(0.001)PTAFK 89.46799999999999 1.5983e-05 51738200.0 7337.3099999999995 7992.87 7544.7 7524.43 10173.6 9216.65 8726.4 8827.1 10435.1 10263.7 9972.5 True False 8082.18830975786 8666.457205879702 8056.728711966715 7989.196951879599 9459.041433014654 9141.592658170572 9058.487927269302 8651.036565774006 9996.549036037744 9615.648230386007 8745.945720886028 0.924106845353149 0.9909113871108872 0.9211958282254821 0.9134743350625592 1.0815344314824291 1.0452377535730306 1.0357356672860314 0.9891482112808714 1.1429923481191033 1.0994406479590948 1.0 13.0943986794508 -6.762797756737042 24.999975642840774 1.0595952359098626 0.9400837337171091 0.6174972265879191 0.04494177258835291 23.30401627230708 428907.9132665135 0.008294256932858542 0.016305655192806606 1.7266417713495868e-07 6.762797756737042 -0.11951150219275353 RLS(ph)ESLHVVDENKNESK ddPTM_A549_PD325901_60min_R1 1 RLSESLHVVDENKNESK 17 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RLS(0.5)ES(0.5)LHVVDENKNESK 40.622 0.020495 2662100.0 917.35 1412.3 1143.3 1184.3 1182.1 1369.1 1146.9 1232.2 1423.9 1419.9 1856.9 True False 1010.4786966826227 1531.3194774672818 1220.8912132214066 1257.4515212595513 1099.073374023613 1357.950503523659 1190.545907107762 1207.6228043578 1364.0584347456331 1330.2472716783502 1628.5130718589398 0.6204916092746902 0.9403175841378344 0.7496969071471837 0.7721470235570025 0.6748937991446553 0.833859136281642 0.7310631567413577 0.7415493465946236 0.8376097547614813 0.816847770315948 1.0 10.669339584764574 -9.857670247317683 0.6426532185646093 0.9945596630197877 0.7606480272468992 0.19405808400098568 0.09426468796010068 0.3668314567529407 0.31293768113574283 0.039489369455071976 0.01728193383653015 1.387809169686365e-10 9.857670247317683 -0.23391163577288854 RLS(ph)ESQLSFR ddPTM_A549_MK2206_60min_R1 6 RLSESQLSFR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RLS(0.998)ES(0.002)QLSFR;RLS(1)ESQLSFR;RLS(1)ESQLSFR;RLS(0.997)ES(0.003)QLSFR;RLS(0.999)ES(0.001)QLSFR;RLS(0.999)ES(0.001)QLSFR 165.58 1.1289e-09 113823900.0 6386.310000000001 8281.1 7175.4400000000005 7610.41 10647.74 9406.5 8698.61 8739.11 13637.939999999999 13852.58 14281.919999999998 True False 7464.16299771119 8702.57261856207 8193.025288282657 9474.960791644291 9081.471550975884 10401.889586470645 10279.034840368386 9977.905604901925 10548.968365315022 10723.272556965361 10735.325103060322 0.6952898888533314 0.8106482603010527 0.7631837144780151 0.8825965399914402 0.8459428535039918 0.9689403428970562 0.9574963721814198 0.9294460586067879 0.9826407923415216 0.9988773003165479 1.0 13.390078261241802 -5.776453529064814 0.3772353386484054 0.9995799773142243 0.5752385843112017 0.8972635912782424 0.03160979758070148 0.7738986695092517 0.0962750804769558 0.008072815529938842 0.13864378720093354 1.673194664141715e-06 5.776453529064814 -0.42434139300302265 RLS(ph)ESQLSFR ddPTM_A549_PD325901_60min_R1 4 RLSESQLSFR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RLS(1)ESQLSFR;RLS(1)ESQLSFR;RLS(0.998)ES(0.002)QLSFR;RLS(0.995)ES(0.005)QLSFR 213.59 1.7221e-26 227111000.0 10097.67 11272.14 10873.34 11394.27 12177.66 12576.16 10466.96 13313.009999999998 13072.03 12408.1 12698.84 True False 11122.778024888237 12222.082797378776 11611.270239105084 12098.068179635286 11322.343172246328 12473.743922572557 10865.28589054028 13047.4715716957 12522.658038308844 11624.650448420402 11136.96318457924 0.9987262991305705 1.0974340666136029 1.0425885447105179 1.0862986596190636 1.0166454700976093 1.1200309919174634 0.9756058011922734 1.1715466196172615 1.1244230434063303 1.043789968212918 1.0 13.443068273284517 RLS(ph)ESSALK ddPTM_A549_MK2206_60min_R1 6 RLSESSALK 9 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RLS(0.996)ES(0.004)SALK;RLS(1)ESSALK;RLS(0.559)ES(0.434)S(0.008)ALK;RLS(0.998)ES(0.002)S(0.001)ALK;RLS(1)ESSALK;RLS(1)ESSALK 151.92 8.2894e-06 145754000.0 27750.1 31368.1 28170.899999999998 27860.800000000003 36932.2 29260.6 27688.100000000002 29984.000000000004 38086.0 35481.8 40118.9 True False 32433.638455193246 32964.60230601212 32165.957222648594 34686.69725071886 31499.522303789505 32356.937270385704 32718.66936942845 34234.32382214885 29459.581810844436 27466.436736819687 30156.269904688357 1.0755189072687943 1.093125987073327 1.066642437022617 1.150231688479687 1.044543055336307 1.0729754499695339 1.084970703367452 1.1352307142212732 0.9768974048831017 0.9108035185926464 1.0 14.880170369070735 -8.773563396419307 24.98357165544451 0.9890904319415507 1.0894068721551857 0.6877981387317664 0.03720139629849592 79.35804946651234 163529.9821818042 0.00480698129332314 0.005136071695895163 1.6843665323277136e-09 8.773563396419307 0.10031644021363506 RLS(ph)ESSALK ddPTM_A549_PD325901_60min_R1 4 RLSESSALK 9 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RLS(0.996)ES(0.004)SALK;RLS(1)ESSALK;RLS(1)ESSALK;RLS(0.961)ES(0.039)SALK 159.99 7.1787e-06 258246000.0 19477.8 19342.300000000003 21003.3 21807.3 24464.4 18026.2 21243.5 21357.399999999998 20323.0 22456.8 27740.5 True False 21455.171917201504 20972.343502807755 22428.710241103083 23154.287393028313 22746.10494159824 17879.400603767554 22051.93301738925 20931.40990244383 19468.894985136234 21038.873815498537 24328.594361518084 0.8818911441566211 0.8620450154728585 0.9219073616756028 0.9517314090966456 0.9349535202731254 0.7349130138010939 0.9064203500499002 0.8603624850415619 0.8002474247312573 0.8647796704924685 1.0 14.570365347328897 -11.008415755584888 1.3045329068579083 0.999655635712851 0.866595066262489 0.0 0.07083063604106356 0.3780268334131473 1.1502641421448396 0.044018357269088156 0.010108562902823063 9.808085530489105e-12 11.008415755584888 -0.13306056945036193 RLS(ph)FAVPFR ddPTM_A549_MK2206_60min_R1 4 RLSFAVPFR 9 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 RLS(1)FAVPFR;RLS(1)FAVPFR;RLS(1)FAVPFR;RLS(1)FAVPFR 81.625 0.00066005 13267100.0 1491.2800000000002 2000.56 1675.65 2050.101 2473.15 1811.9479999999999 2043.7499999999998 1974.1799999999998 3159.16 2820.54 2743.6 True False 1742.9716057045057 2102.3799589173586 1913.2823665602139 2552.3758370325304 2109.3529111619955 2003.687134686261 2415.0729202715006 2254.026060672687 2443.615304141873 2183.3780550498936 2062.288400492112 0.8451638506469756 1.0194403258126652 0.9277472375365435 1.2376425316766906 1.022821498030369 0.971584349797115 1.1710645900424042 1.092973252496994 1.1849047415282785 1.0587161594512613 1.0 11.01003038500414 -4.922423613948171 0.8863628397222314 1.089617073843032 0.580065940692985 0.38712658334366135 0.08742610385371935 3.0432175476578 1.1831354572369148 0.014482946763212998 1.7288503877192274 1.1955737911375246e-05 4.922423613948171 -0.509551133150047 RLS(ph)FAVPFR ddPTM_A549_PD325901_60min_R1 3 RLSFAVPFR 9 1 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 1 RLS(1)FAVPFR;RLS(1)FAVPFR;RLS(1)FAVPFR 110.93 0.00014271 31732700.0 2872.3900000000003 2142.89 2189.01 2095.91 3046.1800000000003 2359.1899999999996 2576.8900000000003 2367.99 2677.49 2373.58 2100.0299999999997 True False 3163.9929182582414 2323.47886077311 2337.569382186471 2225.369600543026 2832.2268255505037 2339.9775388269504 2674.954959078313 2320.7585817977824 2564.964406522286 2223.711753722304 1841.739623186994 1.717937149434395 1.2615675047227912 1.2692181634999415 1.2082976184723597 1.5377998007392297 1.2705257080682189 1.4524066949537098 1.2600904886771571 1.3926856838122454 1.2073974658124231 1.0 10.846853398811703 -10.820978297178407 0.6265914572684304 0.9398165022640311 1.37165978454822 0.27554370885273793 0.15565643621449216 0.7606946727459191 0.4099662372030719 0.1875931767280402 0.027775573946305667 1.510155618671373e-11 10.820978297178407 0.4318432822841888 RLS(ph)GEER ddPTM_A549_MK2206_60min_R1 4 RLSGEER 7 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 RLS(1)GEER;RLS(1)GEER;RLS(1)GEER;RLS(1)GEER 68.557 0.009485700000000001 804780000.0 4857.0599999999995 5065.48 4233.16 3518.7200000000003 3845.53 2845.67 2952.8599999999997 3164.8900000000003 3826.36 5543.4400000000005 5615.42 True False 5676.8129842840535 5323.291295585586 4833.485741549871 4380.806557961344 3279.857631142787 3146.7969105971333 3489.3564395610542 3613.5228495691276 2959.695569441337 4291.173053913714 4220.956236292251 1.3449115950253605 1.2611576613411284 1.1451162890510505 1.0378706417978663 0.7770413734551916 0.7455175402058482 0.8266743941951304 0.8560910483979096 0.7011907737856994 1.0166352868143318 1.0 12.043354155888167 -6.25023897681024 1.5750520021111047 0.840192148666994 1.3088895726906886 0.7755097965573057 0.09656536808605364 0.1647440658847161 0.7615238321079011 0.017123954541228118 0.06566536440321838 5.620319738758072e-07 6.25023897681024 0.46869742402369463 RLS(ph)GEER ddPTM_A549_PD325901_60min_R1 1 RLSGEER 7 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 RLS(1)GEER 89.029 0.010214 208890000.0 2041.2 2053.4 2740.4 1874.2 2347.9 2101.7 1891.9 1985.7 2320.3 2711.3 2976.2 True False 2248.42112134798 2226.4472244079257 2926.3800233638967 1989.965077382971 2182.9916038152783 2084.5844520164137 1963.8972897874037 1946.0936557484854 2222.785860060603 2540.108055286647 2610.1462676862384 0.8614157563442184 0.8529971105341762 1.121155568786566 0.7623960013348117 0.8363483804876533 0.798646603764582 0.7524089029417874 0.7455879694717639 0.8515943675566464 0.9731669396207145 1.0 11.349914939638433 -10.376257237453293 0.9523654950604272 0.9918984475559862 0.8438639700965952 0.24084368976831694 0.0977370338131937 0.5675686485795441 0.9914267342204598 0.049935930837506866 0.01865792926617224 4.2047750110944837e-11 10.376257237453293 -0.14803447745939102 RLS(ph)GFLR ddPTM_A549_MK2206_60min_R1 2 RLSGFLR 7 1 Q8IUF8-3;Q8IUF8-4;Q8IUF8 Q8IUF8-3 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA 1 RLS(1)GFLR;RLS(1)GFLR 62.823 0.011289 6578800.0 499.87 569.82 642.39 507.11 610.4000000000001 553.02 437.83000000000004 409.26 744.11 751.69 577.52 True False 584.2358353518525 598.8214041019963 733.4905615460362 631.3519727650329 520.6109685919909 611.5402093350339 517.3780436366837 467.273858306185 575.5702730994975 581.8827069286223 434.1058452588586 1.3458372922932447 1.3794363993069878 1.6896583392205964 1.4543733507862715 1.1992719616146816 1.4087352566523739 1.1918246420482306 1.0764053592218925 1.3258754273540898 1.3404166594016809 1.0 8.761903038463636 -14.094413241691493 0.08448081597478668 1.215307453015061e-13 1.7079224128845827 0.19706476474829226 0.16185848146362491 71.29303769534584 0.53226670958358 14.38502118505935 1.8491159717401129 8.046124686339146e-15 14.094413241691493 1.7079224128844612 RLS(ph)GFLR ddPTM_A549_PD325901_60min_R1 2 RLSGFLR 7 1 Q8IUF8-3;Q8IUF8-4;Q8IUF8 Q8IUF8-3 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA 1 RLS(1)GFLR;RLS(1)GFLR 65.22399999999999 0.010534 8472600.0 466.15 481.67 533.5799999999999 578.44 513.1 340.92 536.56 386.96000000000004 383.28 610.1 587.05 True False 513.4732048385072 522.2620213210122 569.7919474771957 614.1689250674452 477.0616260989049 338.14366055166596 556.9790844168979 379.2417792357528 367.1720744921033 571.5781818796827 514.8465716165598 0.9973324736848487 1.0144032224613417 1.1067218447004776 1.192916412241077 0.9266093092569027 0.656785301084813 1.0818350847089198 0.7366112549705375 0.7131679508697605 1.1101912946317036 1.0 9.007998751494402 -6.9670836945699595 9.470421071691407 0.8533033412586593 1.0737766343369597 0.2684473254007821 0.14655614933359806 0.2974364580095364 80.95235778125858 0.020558233222799843 0.0388102066256759 1.0787388142663952e-07 6.9670836945699595 0.22047329307830044 RLS(ph)GKDTEQIR ddPTM_A549_MK2206_60min_R1 1 RLSGKDTEQIR 11 2 Q9UMX1-2;Q9UMX1-3;Q9UMX1 Q9UMX1-2 SUFU Suppressor of fused homolog 1 RLS(0.999)GKDT(0.001)EQIR 79.02199999999999 0.00020553 8219400.0 1692.5 1684.5 1513.6 1355.8 1958.3 1431.7 1360.7 1248.1 2367.4 2138.5 2024.6 True False 1978.1526223478309 1770.2338549187682 1728.2512398326262 1687.9710608641747 1670.2366641443239 1583.2015437144555 1607.9215768139127 1425.0219971459437 1831.187679960961 1655.4113647472475 1521.83594388261 1.2998461695555927 1.1632225287059712 1.1356357081587884 1.1091675601758424 1.0975142694311082 1.0403234002183477 1.0565669599784029 0.9363834537317681 1.203275351276769 1.0877725495981194 1.0 10.57159712727233 -4.259581737055753 0.759880369299085 1.0790016837435235 2.0990203410383765 0.5403984099917185 0.0640705167370946 7.945923978394985 1.059026242161366 0.013101660059971265 9.88764247787102 5.50070383931808e-05 4.259581737055753 1.020018657294853 RLS(ph)GKDTEQIR ddPTM_A549_PD325901_60min_R1 2 RLSGKDTEQIR 11 2 Q9UMX1-2;Q9UMX1-3;Q9UMX1 Q9UMX1-2 SUFU Suppressor of fused homolog 1 RLS(1)GKDTEQIR;RLS(0.99)GKDT(0.01)EQIR 95.822 5.8268999999999994e-05 23305000.0 3026.2 3460.4 3610.2000000000003 2712.0 3501.1000000000004 3948.1 3592.6 3233.5 3354.8 3790.2 4034.3 True False 3333.417596229306 3752.0200522748546 3855.2098818961977 2879.5140806011177 3255.194814139303 3915.9479825883845 3729.3183589461532 3169.0053058683234 3213.809422631259 3550.8861251604194 3538.106675534774 0.9421472843877639 1.060459843740508 1.0896251118017788 0.8138573380255383 0.9200386287525631 1.1067919488313622 1.0540435043221184 0.8956782812065264 0.9083415841738299 1.0036119458223272 1.0 11.788761831261656 -8.261918689694822 24.999986411148036 0.9509295849474702 0.9981409159916247 0.06331199718112246 0.08550844111952983 107.83091655712285 5624239.01257434 0.014585884805605544 0.018173027728893676 5.471183869418681e-09 8.261918689694822 0.047211331044154536 RLS(ph)GNEYVFTK ddPTM_A549_PD325901_60min_R1 2 RLSGNEYVFTK 11 1 A0A2R8Y4E6;O95263-2;O95263-3;O95263-6;O95263-4;O95263 A0A2R8Y4E6 PDE8B High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8B 1 RLS(0.931)GNEY(0.068)VFT(0.001)K;RLS(0.995)GNEY(0.005)VFTK 54.7 0.014481 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RLS(ph)GNEYVLSTK ddPTM_A549_MK2206_60min_R1 4 RLSGNEYVLSTK 12 1 O60658-6;O60658-2;O60658 O60658-6 PDE8A High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A 1 RLS(1)GNEYVLSTK;RLS(1)GNEYVLSTK;RLS(0.989)GNEY(0.011)VLSTK;RLS(1)GNEYVLSTK 182.37 3.1333000000000004e-19 164829800.0 18798.3 19430.899999999998 18076.0 15880.0 24737.899999999998 18395.0 17506.7 18042.4 28480.0 25888.399999999998 25541.0 True False 21970.99346569055 20419.849813915753 20639.448606774953 19770.6007128803 21098.98768009798 20341.546690387233 20687.440779604698 20599.965452532633 22029.32547321456 20040.19245972534 19198.464804260468 1.1444140815267068 1.0636188894324634 1.0750572411495478 1.0298011280825363 1.098993481781718 1.0595402756304293 1.0775570333630948 1.073000662425943 1.1474524498607763 1.043843487697937 1.0 14.228703330713 -11.090098408720422 1.4353523176221263 1.0002446202712514 1.0903564487876034 0.29431009012468956 0.035503935908158 0.31058013181028643 1.1482746932976589 0.02649371205715223 0.005871016012171251 8.126463541440139e-12 11.090098408720422 0.09011182851635202 RLS(ph)GNEYVLSTK ddPTM_A549_PD325901_60min_R1 4 RLSGNEYVLSTK 12 1 O60658-6;O60658-2;O60658 O60658-6 PDE8A High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A 1 RLS(1)GNEYVLSTK;RLS(1)GNEYVLSTK;RLS(0.999)GNEY(0.001)VLSTK;RLS(1)GNEYVLSTK 171.91 8.085100000000001e-16 262061000.0 19532.4 19417.5 18595.9 20692.1 23087.500000000004 21136.1 21375.5 19776.600000000002 23104.3 21241.1 21795.4 True False 21515.314869007103 21053.880870722172 19857.929600230877 21970.204021831272 21465.9136475511 20963.974609251614 22188.956349622422 19382.140198557427 22133.306618367526 19899.933320971202 19114.703972424104 1.1255897501758985 1.10144948627484 1.0388824032472064 1.149387615603499 1.1230052884166544 1.0967459731259959 1.1608318068453165 1.0139911257071592 1.157920449633864 1.0410798592371564 1.0 14.222395237016139 -10.975411945659856 1.1829811774279329 0.9986078585322512 1.1106445446445277 0.3414563750304265 0.04547397087329325 0.34673118846531437 0.8449540701587992 0.032291052460478094 0.007060663354453264 1.058249457086616e-11 10.975411945659856 0.11203668611227646 RLS(ph)GVSSVDSAFSSR ddPTM_A549_MK2206_60min_R1 2 RLSGVSSVDSAFSSR 15 1 P57078-2;P57078 P57078-2 RIPK4 Receptor-interacting serine/threonine-protein kinase 4 1 RLS(1)GVSSVDSAFSSR;RLS(0.978)GVS(0.017)S(0.005)VDSAFSSR 118.96 2.9887e-07 11951600.0 1068.0 921.79 805.55 847.65 1202.38 941.61 841.15 1077.55 1771.47 1284.6999999999998 1581.38 True False 1248.2522899069338 968.7051737165756 919.7891029645698 1055.324288052454 1025.511494783155 1041.2505452098678 993.9760669780429 1230.2960123584744 1370.2348734562988 994.4853777370994 1188.6797021323146 1.0501166021996968 0.8149421345202266 0.7737905352590819 0.8878121550821128 0.8627315608599524 0.875972344225294 0.8362017667122588 1.035010533242476 1.1527368314595607 0.8366302343290127 1.0 10.215144308074782 -8.341743384971192 4.797258548364965 1.072853166599211 0.8662250029505768 0.20165636259805808 0.10200368572633303 0.11693787340142354 4.86478780922784 0.01344175339660595 0.016358853531401922 4.552569819999118e-09 8.341743384971192 -0.20662816364863412 RLS(ph)GVSSVDSAFSSR ddPTM_A549_PD325901_60min_R1 2 RLSGVSSVDSAFSSR 15 1 P57078-2;P57078 P57078-2 RIPK4 Receptor-interacting serine/threonine-protein kinase 4 1 RLS(1)GVSSVDSAFSSR;RLS(1)GVSSVDSAFSSR 145.71 5.26e-14 15312500.0 1781.77 1735.1100000000001 1773.73 2102.77 2310.1000000000004 1891.29 1883.02 2009.17 1818.56 2337.86 1868.88 True False 1962.6539787302515 1881.3338090690743 1894.105984104965 2232.6533271628364 2147.8465454123593 1875.8879612952007 1954.6793565280818 1969.095528186627 1742.1322474127528 2190.247120618316 1639.0196078064164 1.1974560703132597 1.1478409410775503 1.1556335110840705 1.3621882963016594 1.3104459124115861 1.1445183159253338 1.1925905872133702 1.2013861938003096 1.062911169039849 1.3363153864581494 1.0 10.678617398352584 -8.822543840281705 1.1330097032786433 1.0174862421106847 1.2234566882183286 0.0 0.11616728269154204 0.20672922504596564 0.5295508497956496 0.015056581536250554 0.015511141622033143 1.5047216155388368e-09 8.822543840281705 0.20597044610764392 RLS(ph)HSQER ddPTM_A549_PD325901_60min_R1 1 RLSHSQER 8 1 P12270;P12270-2;Q5SWX9 P12270 TPR Nucleoprotein TPR 1 RLS(0.994)HS(0.006)QER 41.398999999999994 0.037381 2129900.0 522.28 479.85 489.88 358.28 426.12 364.78 383.23 422.18 418.38 591.02 632.37 True False 575.3014811177851 520.2886435337217 523.1262026877484 380.4101418870828 396.1908012341951 361.80935262242343 397.8140273615026 413.7592887061973 400.7969435556413 553.7028963358958 554.5924989237103 1.0373408984691723 0.9381458359848689 0.9432623118829987 0.6859273117204782 0.7143818244983062 0.6523877501491304 0.7173087052809668 0.7460600161545171 0.7226872781969864 0.9983959346916143 1.0 9.11528429328023 -6.074079793863135 7.8781235192891685 0.810439238833096 0.97637983726102 0.3382085371767679 0.1154756684975513 0.35787011585940337 34.57487496085755 0.01976198808086991 0.052756581991657864 8.431798242813931e-07 6.074079793863135 0.16594059842792397 RLS(ph)IIGPTSR ddPTM_A549_MK2206_60min_R1 2 RLSIIGPTSR 10 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 RLS(1)IIGPTSR;RLS(1)IIGPTSR 143.56 1.8994e-08 104205000.0 848.36 775.22 812.06 554.4100000000001 1067.04 561.84 704.01 1062.93 1050.24 976.75 1033.22 True False 991.5424275893691 814.6753867676622 927.2223188547053 690.2404748884111 910.0798294993403 621.2935358807921 831.9195041469553 1213.6035825866022 812.3623168886537 756.1014966176635 776.6429585786774 1.2767030417735017 1.0489702864989434 1.1938849230688977 0.8887487709302223 1.1718123745882711 0.7999731781741922 1.0711736905069464 1.5626274199506036 1.0459919940243143 0.9735509583469263 1.0 9.601107699254365 -8.98173324370114 24.987150052063853 1.0202903918482291 1.1195269165230475 0.07329742987421028 0.18939880101766166 285.39001262713464 390391.8720285807 0.03318733277867416 0.03367454988943943 1.0429578477277758e-09 8.98173324370114 0.09923652467481836 RLS(ph)IIGPTSR ddPTM_A549_PD325901_60min_R1 4 RLSIIGPTSR 10 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 RLS(1)IIGPTSR;RLS(1)IIGPTSR;RLS(1)IIGPTSR;RLS(1)IIGPTSR 121.45 1.8269e-05 168906000.0 1648.39 1880.6699999999998 1765.7099999999998 1629.07 2069.49 2058.7000000000003 2105.75 1962.91 2191.25 2178.8199999999997 2196.58 True False 1815.7333393194197 2039.1606611119385 1885.541698676785 1729.6939540135913 1924.1361617529194 2041.9346297598106 2185.885468560614 1923.7582201768937 2099.1593827771385 2041.2489333602518 1926.4145852678712 0.942545469290526 1.0585263819669377 0.9787829229992033 0.8978825052723916 0.9988172724955594 1.0599663464839664 1.134691091563067 0.9986210833787846 1.089671661972621 1.0596104021276462 1.0 10.911702504844708 -7.107698413907163 4.909451670308609 1.0482875062568977 0.9735017390825962 0.39292173929648544 0.05069945840435374 0.226870198556289 8.465185218415453 0.008122161722123815 0.014335302951496265 7.803718341799456e-08 7.107698413907163 -0.07478576717430152 RLS(ph)ITSLTGK ddPTM_A549_MK2206_60min_R1 4 RLSITSLTGK 10 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 RLS(1)ITSLTGK;RLS(1)ITSLTGK;RLS(1)ITSLTGK;RLS(1)ITSLTGK 88.101 0.00029731 59372400.0 7097.570000000001 7965.72 8825.57 6876.219999999999 10441.5 7449.51 7128.96 8672.72 12643.27 10963.94 11058.09 True False 8295.466297073735 8371.141123658967 10077.168535101502 8560.89420868524 8905.569181771412 8237.81220361547 8424.199753247087 9902.104619091073 9779.589532153426 8487.178339212967 8312.061065241955 0.9980035314902086 1.007107750767624 1.2123549690028856 1.0299363950156497 1.071403243054998 0.9910673344380292 1.013491080867302 1.191293536148105 1.1765541007690796 1.0210678521965255 1.0 13.020990537821215 RLS(ph)ITSLTGK ddPTM_A549_PD325901_60min_R1 4 RLSITSLTGK 10 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 RLS(1)ITSLTGK;RLS(1)ITSLTGK;RLS(1)ITSLTGK;RLS(1)ITSLTGK 144.51 1.7956000000000002e-08 130863000.0 16339.0 17366.9 18116.8 17749.3 21666.699999999997 20513.1 19111.899999999998 21061.6 22335.799999999996 21380.600000000002 21150.9 True False 17997.72325186392 18830.469612140856 19346.31499316852 18845.633949414987 20144.905738057187 20346.04811469662 19839.21381293297 20641.509865494427 21397.104000836796 20030.625267163985 18549.47338660199 0.9702552130058534 1.015148474551403 1.0429576403577083 1.015965982248688 1.0860095765633733 1.0968531392051415 1.069529759656818 1.1127814485775906 1.1535154424541028 1.0798487293785823 1.0 14.179090609343124 -5.815378643585749 0.8583920929128686 1.0789847049033177 0.9619349461178701 0.47128534084325824 0.037921701219201055 1.2970421358923985 1.1273678565401608 0.009053271267633141 0.1187998580958357 1.5297531509322447e-06 5.815378643585749 -0.11704975878544754 RLS(ph)ITSVTSSVVSTSSNSSDNAPSRPGSDGSILEPLLER ddPTM_A549_PD325901_60min_R1 1 RLSITSVTSSVVSTSSNSSDNAPSRPGSDGSILEPLLER 39 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 RLS(0.236)IT(0.183)S(0.183)VT(0.183)S(0.099)S(0.116)VVSTSSNSSDNAPSRPGSDGSILEPLLER 83.484 6.2117e-07 6322600.0 1340.7 1093.2 1139.9 1357.5 1832.0 1468.0 1616.5 1746.9 1602.2 1629.6 1414.0 True False 1476.8068770288241 1185.327800585733 1217.2604687755463 1441.3496918938113 1703.3266400568973 1456.0450947138493 1678.0167920827412 1712.0567090834618 1534.8651058005842 1526.7067778907235 1240.0869640845178 1.190889768056761 0.9558424811446912 0.9815928269790152 1.1622972691740807 1.3735541856246845 1.1741475693914423 1.353144449285878 1.380594070148436 1.237707636846004 1.231128801533528 1.0 10.276225581285674 -4.912609444745043 20.37262648087471 1.151429078854333 3.5731532971687487 0.0 0.14984985421637137 4573.469784522123 1162446.0506499633 0.02281126908462145 46147.76817412041 1.2228989025521154e-05 4.912609444745043 2.4217242183144156 RLS(ph)KPGTAAELR ddPTM_A549_MK2206_60min_R1 2 RLSKPGTAAELR 12 2 A6NIW2;Q5JSL3 A6NIW2 DOCK11 Dedicator of cytokinesis protein 11 1 RLS(1)KPGTAAELR;RLS(0.997)KPGT(0.003)AAELR 75.911 0.00024677 4494100.0 957.52 952.51 892.55 583.23 1238.54 922.04 907.5699999999999 945.33 1317.28 1171.71 1032.8700000000001 True False 1119.1259668836017 1000.9886905008467 1019.1270111737647 726.1213761821892 1056.352406684017 1019.6096607993824 1072.4637212236366 1079.3334224517066 1018.9181832639075 907.0198972120631 776.3798732381866 1.4414670001887897 1.289302730538137 1.312665418441502 0.9352655848143315 1.3606128173803615 1.313287085285601 1.381364662057145 1.3902130383029345 1.3123964419815817 1.168268174481382 1.0 9.600618908089276 -10.58456592916356 0.8710749089732504 0.9996000547056804 1.29883453146343 0.2565237632411861 0.1338925377060967 0.45772871303890306 0.6199349433559493 0.08611772749115038 0.02368017659945909 2.6027596829171634e-11 10.58456592916356 0.2992344767577496 RLS(ph)KPGTAAELR ddPTM_A549_PD325901_60min_R1 2 RLSKPGTAAELR 12 2 A6NIW2;Q5JSL3 A6NIW2 DOCK11 Dedicator of cytokinesis protein 11 1 RLS(1)KPGTAAELR;RLS(0.999)KPGT(0.001)AAELR 85.734 7.6236e-05 6563300.0 1308.46 1345.03 1231.26 1390.8000000000002 1423.6999999999998 1285.49 1400.58 1423.8400000000001 1344.85 1621.78 1659.18 True False 1441.293895962658 1458.380398483195 1314.8207077678549 1476.7065572640252 1323.7042234983644 1275.0213956428508 1453.8798383267842 1395.4403942191286 1288.330631341853 1519.3805340252939 1455.1113784085928 0.9905041753841232 1.0022465772195235 0.9035876753337128 1.0148409112703456 0.9096927170936261 0.8762362899239367 0.9991536454871548 0.9589921534015324 0.8853828307980504 1.0441678599798938 1.0 10.506913870048521 -5.732402298698487 24.950003860276055 0.9447219427465897 0.9963754510270045 0.05718346268197472 0.05412755048092086 327.4965826889526 281395.4294597264 0.007052264219109435 0.02730450309364068 1.8518154420477895e-06 5.732402298698487 0.05165350828041482 RLS(ph)KSEDKESLTEDASK ddPTM_A549_MK2206_60min_R1 4 RLSKSEDKESLTEDASK 17 3 Q9BXW9;Q9BXW9-1;F8WE37;Q9BXW9-4;Q9BXW9-3 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 RLS(0.995)KS(0.005)EDKESLTEDASK;RLS(0.977)KS(0.023)EDKESLTEDASK;RLS(0.94)KS(0.06)EDKESLTEDASK;RLS(0.962)KS(0.038)EDKESLTEDASK 199.75 9.808499999999999e-49 390314000.0 15726.3 16267.800000000001 14332.7 13208.1 15830.1 14245.900000000001 14239.599999999999 16092.400000000001 20032.8 22754.199999999997 21590.5 True False 18380.5149688796 17095.76153460821 16365.292379194683 16444.08509293414 13501.513260006668 15753.39168233692 16826.75099963209 18373.54698090809 15495.40278580802 17614.01041652178 16228.982982513826 1.1325734328937296 1.053409295765995 1.0083991336257931 1.0132541953277097 0.8319383460167582 0.9706949412240226 1.0368333627413584 1.1321440783261008 0.9547981412331128 1.0853428360545005 1.0 13.986284973270417 -5.42952648385803 1.5780349920934797 0.9847581686011325 1.1594127641925858 0.1829214386484811 0.07391293341971382 0.7403376336750416 2.1885650837601363 0.009847875713090624 0.1790874373434429 3.7194053903912434e-06 5.42952648385803 0.17465459559145324 RLS(ph)KSEDKESLTEDASK ddPTM_A549_PD325901_60min_R1 4 RLSKSEDKESLTEDASK 17 3 Q9BXW9;Q9BXW9-1;F8WE37;Q9BXW9-4;Q9BXW9-3 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 RLS(0.997)KS(0.003)EDKESLTEDASK;RLS(0.658)KS(0.342)EDKESLTEDASK;RLS(0.973)KS(0.027)EDKESLTEDASK;RLS(0.98)KS(0.02)EDKESLTEDASK 259.6 1.7561999999999999e-87 579334000.0 24216.8 22464.000000000004 26274.2 24073.4 28055.5 24215.699999999997 26337.700000000004 28790.5 28087.5 28817.699999999997 31777.7 True False 26675.271708534096 24357.12011741486 28057.325211599633 25560.359243341805 26084.978466220695 24018.495367889747 27339.99558604244 28216.250891789667 26907.080051912315 26998.145503940534 27869.24435543745 0.957158054532239 0.8739784906533586 1.0067486887611103 0.9171529345163185 0.9359772419208547 0.8618280087383711 0.9810095759093752 1.0124512359189428 0.9654757663590038 0.9687433630999414 1.0 14.766386265398339 -7.958238717219073 24.998703223391058 0.9859376112655597 0.9264676676960306 0.3795369755179787 0.03827245626871014 114.48361724284548 68530.73058887573 0.005627860602093498 0.007776002838326183 1.1009339964285908e-08 7.958238717219073 -0.05946994356952906 RLS(ph)LDIQSPPNIGLR ddPTM_A549_PD325901_60min_R1 2 RLSLDIQSPPNIGLR 15 1 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H0Y5I9;H0Y463;H7BZR9 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 RLS(0.995)LDIQS(0.005)PPNIGLR;RLS(0.999)LDIQS(0.001)PPNIGLR 63.691 0.0018338 4268200.0 376.18 393.94 536.3199999999999 360.77 677.35 508.98 507.20000000000005 528.86 696.25 666.4000000000001 701.85 True False 414.3695166709208 427.1387063325504 572.7179003541543 383.05394353188245 629.7752727306437 504.8350356317813 526.5017735504899 518.311472417356 666.9890337745953 624.3233902714643 615.526899393719 0.6731948141975047 0.6939399508831751 0.9304514569846896 0.6223187709735879 1.023148254529508 0.8201673007776479 0.8553676111784604 0.8420614483751756 1.083606637551609 1.0142909934340965 1.0 9.26567809567038 -7.418680933352693 0.45494414593582716 1.0441132094179622 0.6981746893456985 0.45855846177651916 0.1098147385705099 0.6848286113090803 0.2698725129908171 0.03208237165425673 0.09458805348555142 3.813458869767683e-08 7.418680933352693 -0.34593852007226367 RLS(ph)LESEGAGEGAAASPELSALEEAFRR ddPTM_A549_MK2206_60min_R1 1 RLSLESEGAGEGAAASPELSALEEAFRR 28 2 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 RLS(0.997)LES(0.003)EGAGEGAAASPELSALEEAFRR 77.02600000000001 1.3858000000000001e-06 3147500.0 445.67 541.97 585.23 365.14 599.7 420.64 488.29 441.94 740.76 528.24 496.39 True False 520.8882004146285 569.5539580589639 668.2244140375584 454.5993163917574 511.48492441778643 465.15184560176596 577.0059724718642 504.58634838448756 572.9790427506466 408.9102171213869 373.12266333294946 1.3960240199878264 1.5264523279593243 1.7908974171351262 1.2183642567594553 1.3708224524581394 1.24664591919118 1.5464243509566264 1.3523336906882786 1.5356318419054562 1.095913642630984 1.0 8.54350618135546 -10.824675653346082 0.8829355341131946 0.976804319460265 1.4476315299561304 0.49145076757483175 0.1537634617869615 0.41602141713509755 0.5277068521464688 0.13511978361917465 0.027437947463145505 1.497353515780005e-11 10.824675653346082 0.4708272104958654 RLS(ph)LESEGAGEGAAASPELSALEEAFRR ddPTM_A549_PD325901_60min_R1 2 RLSLESEGAGEGAAASPELSALEEAFRR 28 2 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 RLS(1)LESEGAGEGAAASPELSALEEAFRR;RLS(1)LESEGAGEGAAASPELSALEEAFRR 333.19 5.6028999999999967e-247 48241000.0 1810.02 2424.9 1584.5700000000002 1981.9699999999998 1998.92 2808.1 2102.7 2154.2 2786.2 2584.1 2964.5 True False 1993.7718979337005 2629.254833187291 1692.1084489934792 2104.391785519542 1858.522755099637 2785.231764622588 2182.71939914159 2111.2327910627923 2669.105703271495 2420.939484994736 2599.8852935138266 0.7668691780009476 1.0112964751740146 0.650839655585936 0.8094171657378739 0.7148479818460702 1.0712902494472207 0.8395445001312256 0.8120484378021905 1.0266244091346486 0.9311716524703905 1.0 11.344232257866077 -8.328084668351703 0.762122264394129 1.0162728546609785 0.812810100471275 0.19870956048216093 0.11948238469341996 0.4843276633487528 0.5675089597554698 0.02610863616771822 0.03413844761297248 4.698025088189393e-09 8.328084668351703 -0.2034627541897035 RLS(ph)LGAQK ddPTM_A549_MK2206_60min_R1 2 RLSLGAQK 8 1 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 RLS(1)LGAQK;RLS(1)LGAQK 119.03 0.00051476 94389000.0 5363.5 4987.700000000001 5253.6 4414.0 6613.3 4292.4 4039.7 5029.5 6998.6 7343.8 6509.9 True False 6268.7276750148285 5241.552625810827 5998.639477791154 5495.430198151989 5640.492330585539 4746.618918935481 4773.6611992762255 5742.447027197759 5413.428274467675 5684.830479509393 4893.312165900129 1.2810806796058332 1.0711666143716458 1.2258853051709402 1.1230491764755621 1.1526941546652718 0.9700216863361172 0.9755480618102169 1.173529673257915 1.1062912176729829 1.1617551234775276 1.0 12.256595606229386 -2.0000000000000004 0.22338802125950033 1.0318276390921781 2.0771266112951694 0.23362329423570471 0.08455168616095049 39.16763783977266 0.45757848401143436 0.04763529841912892 15.047813310915515 0.00999999999999999 2.0000000000000004 1.0452989722029913 RLS(ph)LGAQK ddPTM_A549_PD325901_60min_R1 1 RLSLGAQK 8 1 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 RLS(1)LGAQK 125.23 0.00046067 71045000.0 2980.4 3048.1 2985.4 2925.6 3258.7 2889.4 3537.3 3598.1 3017.4 3348.5 3216.5 True False 3282.968013945485 3304.974084307882 3188.00719666858 3106.3076674803197 3029.8201539047022 2865.8696843775156 3671.91388718483 3526.3330728451547 2890.589171291153 3137.075138541414 2820.890891073445 1.1638053865657327 1.1716064930998544 1.1301419727919484 1.1011796582810276 1.074064992549837 1.0159448894129168 1.3016858960424174 1.250077797763835 1.02470789651534 1.112086663283758 1.0 11.461935149822914 -8.893671224719089 8.907402578306227 1.0108765849222485 1.1472554628567722 0.22663690983419937 0.0801583495028423 0.20088442685811 15.508018518708875 0.013566165600183928 0.014419353155908868 1.2774054810449179e-09 8.893671224719089 0.13637887793452363 RLS(ph)LGQGDSTEAATEER ddPTM_A549_MK2206_60min_R1 4 RLSLGQGDSTEAATEER 17 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RLS(1)LGQGDSTEAATEER;RLS(1)LGQGDSTEAATEER;RLS(1)LGQGDSTEAATEER;RLS(1)LGQGDSTEAATEER 214.17 1.6797e-55 224650000.0 5722.2 5688.9 4780.0 4758.87 7407.0 5526.91 4155.780000000001 5656.900000000001 8186.0 7909.0 8089.900000000001 True False 6687.967465641814 5978.440710743471 5457.8758763213245 5924.793363633789 6317.440111993568 6111.763947734062 4910.831432712371 6458.78289852968 6331.884070355845 6122.351406960945 6080.954560118509 1.0998219768824378 0.9831418162458625 0.8975360401665226 0.9743196245028879 1.0388895443202342 1.0050665380428285 0.807575748866748 1.0621330639253794 1.041264822447949 1.006807623117912 1.0 12.57008209370185 RLS(ph)LGQGDSTEAATEER ddPTM_A549_PD325901_60min_R1 4 RLSLGQGDSTEAATEER 17 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RLS(1)LGQGDSTEAATEER;RLS(1)LGQGDSTEAATEER;RLS(1)LGQGDSTEAATEER;RLS(1)LGQGDSTEAATEER 258.11 7.4317999999999985e-87 235610000.0 14261.3 14365.9 12747.1 13984.3 14934.5 13012.0 13580.1 15567.800000000001 15103.300000000001 16455.7 17163.6 True False 15709.09667738583 15576.56481013044 13612.1948605393 14848.078450350375 13885.552241228017 12906.034586114849 14096.898136815864 15257.288016297165 14468.560824140548 15416.684293652665 15052.586009024775 1.043614477138177 1.0348098858755241 0.9043093892556476 0.9864137923841266 0.9224695499433079 0.8573965017291406 0.9365100540441404 1.0135991255688332 0.9612010066221129 1.024188420807534 1.0 13.877723740415016 -5.632222602542384 9.58325578644799 0.96468916211438 1.0413321148653722 0.29546818903552974 0.04805805469327315 0.2710978303533516 21.649188914673434 0.006655705801272572 0.025860403624566073 2.332262328462626e-06 5.632222602542384 0.0766429527509922 RLS(ph)LGQGDSTEAATEERGPR ddPTM_A549_MK2206_60min_R1 2 RLSLGQGDSTEAATEERGPR 20 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RLS(0.999)LGQGDSTEAATEERGPR;RLS(0.999)LGQGDSTEAATEERGPR 54.605 0.0018419 11178100.0 2098.55 2219.7200000000003 1501.55 1503.0 2577.6000000000004 1776.46 1912.0 1765.95 2701.5 2710.8 2896.6000000000004 True False 2452.733935378461 2332.6942668093125 1714.4923686381346 1871.2350674722331 2198.438454526073 1964.4438180812879 2259.385650671124 2016.278820495057 2089.6145634090294 2098.4283972676353 2177.294277906929 1.1265054798822678 1.0713729836518802 0.7874417280360954 0.859431399080828 1.0097112167306435 0.9022408399335629 1.0377033888331857 0.9260479122892571 0.9597299660465798 0.9637780333877932 1.0 11.088320696590996 -7.752726316680016 24.961037023450714 0.9793736652598963 0.9544576685588816 0.007614757705163844 0.09208397944805244 918.1668181982674 2630341.2105535273 0.014377961636241955 0.02114301502066804 1.7671510916116988e-08 7.752726316680016 -0.024915996701014742 RLS(ph)LPADIR ddPTM_A549_MK2206_60min_R1 4 RLSLPADIR 9 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;H0YBX5;Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6 E5RGN0;Q00537 CDK16;CDK17 Cyclin-dependent kinase 16;Cyclin-dependent kinase 17 1 RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR 147.19 2.306e-05 486500000.0 5969.47 6416.139999999999 5772.51 5289.29 8175.92 5824.78 5105.16 6623.620000000001 7410.2699999999995 7323.41 7946.82 True False 6976.970596470728 6742.69412045028 6591.138718582342 6585.16628744525 6973.252998575731 6441.154353423957 6032.701489738596 7562.53841898551 5731.855676769583 5669.046594670863 5973.405272925617 1.1680055642790148 1.1287856444315698 1.1034139519139265 1.1024141149927382 1.1673832060553317 1.078305264606506 1.009926702459272 1.2660347110989805 0.9595624965794879 0.9490477099161083 1.0 12.54433789115708 -8.807493348165517 24.999991391248482 0.980904429412119 1.1221015117137763 0.5631859700403412 0.061785729711819844 65.29272181933757 35443.28292443023 0.00997478925522223 0.010618989311352914 1.5577818942827319e-09 8.807493348165517 0.14119708230165728 RLS(ph)LPADIR ddPTM_A549_PD325901_60min_R1 4 RLSLPADIR 9 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;H0YBX5;Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6 E5RGN0;Q00537 CDK16;CDK17 Cyclin-dependent kinase 16;Cyclin-dependent kinase 17 1 RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR 142.71 2.9809000000000002e-05 771010000.0 19733.8 20105.170000000002 23589.95 21345.699999999997 24838.0 22397.1 21622.5 21981.6 20780.65 21714.48 23752.8 True False 21737.160848744243 21799.50323500026 25190.905864893146 22664.175409397965 23093.464566448256 22214.705443334842 22445.35606978601 21543.15974376839 19907.311547156984 20343.424026983666 20831.356181405026 1.0434827506884923 1.046475469247626 1.2092782460020362 1.0879836728839092 1.1085915081737445 1.0664070668219217 1.077479347687488 1.0341698138212791 0.9556416478024179 0.9765770336711487 1.0 14.346469145596155 -8.387348571371176 2.1157806930510845 0.9791019325298754 1.0959454464765555 0.5720632545334206 0.04325055271198196 0.16534903821547678 1.4472289568776118 0.007779135658088798 0.009569172553214083 4.098749990103633e-09 8.387348571371176 0.11684351394668002 RLS(ph)LPADIRIPDGYLEK ddPTM_A549_MK2206_60min_R1 1 RLSLPADIRIPDGYLEK 17 2 Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6 Q00537 CDK17 Cyclin-dependent kinase 17 1 RLS(1)LPADIRIPDGYLEK 84.32700000000001 2.2592e-05 6233400.0 1053.4 1537.4 1697.7 1265.3 2107.6 1252.2 893.86 1135.1 2311.1 2417.1 2197.7 True False 1231.188166842662 1615.647093233669 1938.4593881235799 1575.298556801476 1797.574831920837 1384.7069728569118 1056.2627916887504 1296.0039010979574 1787.639540068334 1871.0754312511435 1651.9504365656487 0.745293647793854 0.9780239512467135 1.1734367722033925 0.9535991649219637 1.088153005157913 0.8382254952731346 0.6394034399026441 0.7845295309175906 1.0821387255326973 1.1326462282615746 1.0 10.689954686919677 -8.78702977306854 24.95112808841119 1.0387877405526926 0.9090945115919357 0.20016118396167304 0.14800701181317924 342.16385202384663 333614.7221829493 0.02723181550684063 0.028995581525546436 1.6329399978166077e-09 8.78702977306854 -0.12969322896075697 RLS(ph)LPADIRIPDGYLEK ddPTM_A549_PD325901_60min_R1 2 RLSLPADIRIPDGYLEK 17 2 Q00537;Q00537-2;F5H6Z0;F8VQZ9;F8VZY6 Q00537 CDK17 Cyclin-dependent kinase 17 1 RLS(1)LPADIRIPDGYLEK;RLS(1)LPADIRIPDGYLEK 149.41 2.7133000000000002e-17 30071000.0 5154.299999999999 4861.7 6549.5 7518.3 7652.5 11514.2 8379.0 8033.799999999999 11600.3 7384.2 7510.8 True False 5677.560741604888 5271.412521137632 6993.988455342959 7982.688315701834 7115.014799691817 11420.432172720843 8697.867430164735 7873.559556605821 11112.779732129904 6917.960351804542 6587.019214884011 0.8619317108982902 0.80027283193988 1.0617835210711641 1.2118817412380054 1.0801569826325614 1.7337784816105084 1.3204557549355644 1.1953144965502374 1.687072615033443 1.050241410587165 1.0 12.685410043253947 -6.180612053844038 1.2385604038501061 1.3405552087717072 0.8042084229991346 0.37822718852983384 0.2259577610912038 0.47611712154724134 1.2679770696240331 0.04127635086529736 0.2100235194905134 6.597629845371458e-07 6.180612053844038 -0.5363467857725726 RLS(ph)LPADIRLPEGYLEK ddPTM_A549_MK2206_60min_R1 4 RLSLPADIRLPEGYLEK 17 2 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;H0YBX5 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 RLS(1)LPADIRLPEGYLEK;RLS(1)LPADIRLPEGYLEK;RLS(1)LPADIRLPEGYLEK;RLS(1)LPADIRLPEGYLEK 104.06 2.7623000000000003e-09 46396300.0 4309.29 5164.4400000000005 4905.1 4546.6 6383.79 4553.79 4165.48 3975.72 7517.700000000001 7110.300000000001 7054.23 True False 5036.592799974764 5427.287936893254 5600.7169374359255 5660.517204104631 5444.742947555476 5035.669035238839 4922.293797153537 4539.290485131861 5814.952953300037 5504.0782916821845 5302.470004156392 0.9498578579467272 1.0235395829941558 1.0562467931069388 1.0675246063942994 1.0268314470968365 0.9496836439039884 0.9283020541926968 0.8560709408207297 1.0966498535101434 1.0380215800122885 1.0 12.372448839177517 RLS(ph)LPADIRLPEGYLEK ddPTM_A549_PD325901_60min_R1 4 RLSLPADIRLPEGYLEK 17 2 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;H0YBX5 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 RLS(1)LPADIRLPEGYLEK;RLS(1)LPADIRLPEGYLEK;RLS(1)LPADIRLPEGYLEK;RLS(1)LPADIRLPEGYLEK 105.96 2.2884e-09 104721000.0 7263.83 7827.55 8133.1 8457.31 9009.9 9546.5 8532.5 9867.0 9110.9 9571.71 9254.8 True False 8001.248674250981 8487.20510928911 8685.061074303356 8979.698830755393 8377.075706467598 9468.75646913199 8857.208956663157 9670.194944488247 8728.000557008207 8967.350597081751 8116.518271010884 0.9857981473199411 1.0456706713274064 1.0700476219369937 1.1063486252260974 1.0321021190067823 1.166603234659224 1.0912571943930365 1.1914215703827717 1.0753380040036755 1.1048272544533926 1.0 12.986645274343246 -4.399024978835193 16.291541132465333 1.06069533325968 1.0688565371809162 0.0 0.06318112992289951 0.0 0.0 0.008889483809161778 0.0 3.990019527483217e-05 4.399024978835193 0.008161203921236204 RLS(ph)LPSSK ddPTM_A549_MK2206_60min_R1 3 RLSLPSSK 8 1 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 RLS(1)LPSSK;RLS(0.999)LPSS(0.001)K;RLS(0.998)LPS(0.001)SK 84.65799999999999 0.0013062000000000002 26079000.0 6085.6 6223.9 6420.2 6653.5 9224.7 6660.099999999999 6684.4 7387.9 9528.800000000001 9962.9 9403.4 True False 7112.700501364825 6540.669925573715 7330.680899823884 8283.607798686962 7867.758849886199 7364.867361383417 7898.868955724933 8435.157449494853 7370.542014366811 7712.273970465446 7068.276259362713 1.0062850177853855 0.9253557282668281 1.0371242762496142 1.171941714603247 1.1131085658210491 1.0419608814281751 1.1175099367773023 1.1933825362755954 1.0427637154962235 1.0911109989864483 1.0 12.787142712528949 -2.096862397329832 19.171807938710494 1.046913489193657 0.009221529203702783 0.0 0.07814306250223226 0.0 0.0 0.010909790691937475 0.0 0.008000877161291711 2.096862397329832 -1.0376919599899541 RLS(ph)LPSSK ddPTM_A549_PD325901_60min_R1 2 RLSLPSSK 8 1 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 RLS(0.999)LPS(0.001)SK;RLS(0.976)LPS(0.011)S(0.013)K 87.667 0.0011312999999999998 69296000.0 5010.7 5118.2 5573.0 4801.9 5879.7 5236.6 5338.9 5764.7 5423.0 4850.9 5715.200000000001 True False 5519.382575317619 5549.528676324459 5951.217293171433 5098.502457093847 5466.730155863833 5193.9548657892 5542.074761058182 5649.718536180334 5195.090168990493 4544.613346140226 5012.266631637792 1.1011749735097638 1.1071894382663985 1.1873305493380812 1.0172049557203777 1.090670261106509 1.0362487168987737 1.1057023036396754 1.1271783708629743 1.0364752218484758 0.9066982425584257 1.0 12.291247446710136 -9.176839948999373 0.23149704408467495 0.9678279576732541 1.1296106843397427 0.489228464878537 0.05164639242967531 1.640243676855678 0.29170952214402135 0.09741947314613418 0.06319225627285216 6.655183751979429e-10 9.176839948999373 0.16178272666648852 RLS(ph)LQPR ddPTM_A549_MK2206_60min_R1 2 RLSLQPR 7 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 RLS(1)LQPR;RLS(1)LQPR 94.69200000000001 0.005014899999999999 24763000.0 829.37 889.79 1040.8600000000001 582.0999999999999 1270.54 833.6 724.8 864.89 1200.7 1140.87 1165.29 True False 969.347379850293 935.0765103996267 1188.4695992945212 724.7145261314622 1083.6452490741613 921.8109987011035 856.4867780368367 987.4908061145381 928.7433671239015 883.1466746313733 875.9163326321091 1.1066666344003722 1.0675409003845637 1.3568300475950672 0.8273787108795096 1.2371561172033765 1.052396175706739 0.9778180245402126 1.1273802865932985 1.0603105942014444 1.008254603470559 1.0 9.774649260215913 -2.0000000556993625 0.04257248450381689 0.7797906694944053 1.6005094863820788 0.09037793556620255 0.12570556811245343 898.1706354449924 2.826101124574994 14.182420084859004 51.182103628636604 0.009999998717474866 2.0000000556993625 0.8207188168876735 RLS(ph)LQPR ddPTM_A549_PD325901_60min_R1 4 RLSLQPR 7 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 RLS(1)LQPR;RLS(1)LQPR;RLS(1)LQPR;RLS(1)LQPR 105.52 0.0040938 36602300.0 590.792 944.72 923.54 784.6700000000001 1636.27 1129.65 866.14 900.62 1150.43 1203.3 1329.25 True False 650.7687689219164 1024.3348698951283 986.2169780971733 833.1372837851324 1521.3440400250554 1120.4505049342636 899.101431669994 882.6564275772776 1102.081427828091 1127.3234326435365 1165.7606768100043 0.558235306669191 0.8786836700463473 0.8459857994145629 0.7146726599707712 1.305022609089948 0.9611325267895228 0.7712572996803267 0.7571506271703938 0.9453753671326728 0.9670281860324473 1.0 10.187055927559117 -4.765538724817789 0.9218248086312668 0.9511952660661112 2.4168566366887474e-13 0.30294558764506285 0.15360987456053504 4.101261210303876 1.3961171756182857 0.023130449042925074 4.86429436684372 1.7157787121366125e-05 4.765538724817789 -0.9511952660658695 RLS(ph)LTLR ddPTM_A549_MK2206_60min_R1 2 RLSLTLR 7 1 Q00537;Q00537-2;F8VQZ9;F8VZY6;F8W1S5;F8VUX2 Q00537 CDK17 Cyclin-dependent kinase 17 1 RLS(1)LTLR;RLS(0.999)LT(0.001)LR 113.62 0.0031334 33692000.0 1427.06 1173.8899999999999 1078.1399999999999 718.69 1849.73 1063.06 801.9100000000001 1265.08 1805.94 1334.91 1310.02 True False 1667.9128397327609 1233.6359869104144 1231.0364638696803 894.7690822632197 1577.6371673225135 1175.5523035978824 947.60666690883 1444.4089641450123 1396.8974734935778 1033.3529038647403 984.7058792873147 1.6938183012981707 1.2527964063779775 1.2501565084191926 0.9086663348763723 1.6021404974898044 1.1938105868208015 0.9623245751255842 1.466843038644605 1.418593615491144 1.049402593810686 1.0 9.94354906169591 -10.931998258222219 1.1930119277367073 1.000197129705537 1.3017311261570377 0.18289175305612726 0.2282546340154517 0.6294415701156343 1.5938215517988876 0.15478770371783782 0.03651520160991459 1.1695040814136569e-11 10.931998258222219 0.3015339964515007 RLS(ph)LTLR ddPTM_A549_PD325901_60min_R1 2 RLSLTLR 7 1 Q00537;Q00537-2;F8VQZ9;F8VZY6;F8W1S5;F8VUX2 Q00537 CDK17 Cyclin-dependent kinase 17 1 RLS(1)LTLR;RLS(1)LTLR 155.84 0.00077885 45136500.0 878.72 988.2199999999999 1062.3700000000001 798.9200000000001 994.75 767.81 1076.32 1151.81 910.0400000000001 842.94 974.32 True False 967.9270075205263 1071.5007675583913 1134.4688167497825 848.2674739210345 924.8821917012004 761.5572099265936 1117.2799465849034 1128.836245972535 871.7941835493468 789.71662454296 854.484816723357 1.132760920471565 1.2539728577825557 1.3276641018620599 0.9927238697743469 1.0823857529122545 0.8912472112107183 1.3075480391439507 1.3210723278866643 1.0202570794556245 0.9242020561245783 1.0 9.738911046763876 -2.0018677177745765 0.04388006224617524 0.6132422792592614 2.0061332742354216 0.19126935242444554 0.14064943187072432 623.6275995573535 2.020862574084078 16.37146653022056 61.3842719797345 0.009957086551423813 2.0018677177745765 1.39289099497616 RLS(ph)LTMGGVQAR ddPTM_A549_MK2206_60min_R1 4 RLSLTMGGVQAR 12 1 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 RLS(1)LTMGGVQAR;RLS(0.997)LT(0.003)MGGVQAR;RLS(1)LTMGGVQAR;RLS(0.989)LT(0.011)MGGVQAR 159.18 2.7756e-14 34391300.0 4072.42 4505.490000000001 4001.42 3809.4799999999996 6622.43 4046.48 4089.55 3975.88 6391.07 6337.1900000000005 6921.509999999999 True False 4759.744934890258 4734.800196496265 4568.881524901607 4742.802771014053 5648.279319679975 4474.675827763967 4832.568299007376 4539.473165621837 4943.502849441622 4905.614377630396 5202.708043042048 0.9148591263459044 0.9100645581734017 0.8781737293546382 0.9116027137745968 1.08564218344595 0.860066678880486 0.9288563300165023 0.8725212193470664 0.9501787931484874 0.9428963411066326 1.0 12.345047035475941 -9.690311909639219 1.0019748095145937 0.9916711994255484 0.922668836371618 0.07239601857727829 0.05914931834170166 0.5427581566366356 1.1295823563769496 0.017430886125026298 0.011277267187920156 2.0402720980170542e-10 9.690311909639219 -0.06900236305393037 RLS(ph)MEIEK ddPTM_A549_MK2206_60min_R1 6 RLSMEIEK 8 1 P35240;A0A5K1VW66;P35240-4;P35240-6;P35240-5;P35240-8;P35240-3;P35240-2 P35240 NF2 Merlin 1 RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK 137.89 0.00045548 99384100.0 12766.099999999999 14155.999999999998 11308.24 11847.18 17929.300000000003 14476.8 13027.9 15746.0 17657.1 17107.199999999997 18468.300000000003 True False 14920.705578821071 14876.4799348353 12911.918472730518 14749.739631840128 15291.923720800098 16008.725367077897 15394.900794130932 17978.04372010259 13657.795042594693 13242.671638533595 13882.11141085015 1.0748152883400117 1.071629487370917 0.9301120046219096 1.062499730430909 1.1015560434739091 1.1531909587302118 1.1089740125625558 1.2950511048377764 0.983841336406497 0.9539378590625073 1.0 13.760939392011723 RLS(ph)MEIEK ddPTM_A549_PD325901_60min_R1 7 RLSMEIEK 8 1 P35240;A0A5K1VW66;P35240-4;P35240-6;P35240-5;P35240-8;P35240-3;P35240-2 P35240 NF2 Merlin 1 RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK 134.98 0.00045242 300602000.0 37372.1 39298.4 35917.0 34775.8 40486.299999999996 31938.4 33865.1 32830.1 34225.1 38888.0 42228.0 True False 41166.08808011409 42610.2140857468 38354.5436064666 36923.822184427874 37642.68195815262 31678.304259542758 35153.8549121938 32175.277900784764 32786.73806799125 36432.6050433324 37034.223705347256 1.11156881288078 1.1505631770430345 1.035651345404837 0.9970189324934212 1.0164296208190131 0.8553791895729361 0.9492261858081837 0.8687984972164835 0.8853091758814774 0.9837550621608414 1.0 15.176571475947096 -6.212467036496211 1.1292321910953669 0.9345135802658301 1.141493230074214 0.6925685492287579 0.04983061435428969 0.2880188369023277 0.623258283341926 0.008730381320229989 0.04667276368862396 6.131023256304733e-07 6.212467036496211 0.2069796498083839 RLS(ph)MEIEKEK ddPTM_A549_MK2206_60min_R1 5 RLSMEIEKEK 10 2 P35240;A0A5K1VW66;P35240-4;P35240-6;P35240-5;P35240-8;P35240-3;P35240-2 P35240 NF2 Merlin 1 RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK 86.46700000000001 0.00015633 54321800.0 10828.900000000001 12602.7 11788.5 10610.699999999999 15807.0 11525.599999999999 11097.7 12028.6 16456.5 16284.600000000002 16508.0 True False 12656.553578813857 13244.12359951604 13460.286562346006 13210.321976332427 13481.811239406286 12745.231341925903 13114.00843904442 13733.690886042543 12729.129025630458 12605.897549854111 12408.608002377821 1.0199817398042168 1.0673335475645707 1.0847539514316717 1.064609501226969 1.0864886082969831 1.0271282112774918 1.056847668693493 1.1067873917373166 1.0258305382192117 1.0158994101061525 1.0 13.59905366256778 -8.952695279656123 7.669869243708873 1.0112782754802185 1.064509810091946 0.47633960193370295 0.023894354670556433 0.13289580937486284 17.823484867924453 0.004195962813067588 0.0044177740391262675 1.1150766465969546e-09 8.952695279656123 0.05323153461172736 RLS(ph)MEIEKEK ddPTM_A549_PD325901_60min_R1 8 RLSMEIEKEK 10 2 P35240;A0A5K1VW66;P35240-4;P35240-6;P35240-5;P35240-8;P35240-3;P35240-2 P35240 NF2 Merlin 1 RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK;RLS(1)MEIEKEK 118.37 1.3673e-05 111621200.0 15792.5 17570.6 17959.3 17578.16 20775.199999999997 17981.2 17919.3 18855.6 18577.5 18214.3 20705.1 True False 17395.742974175966 19051.336126026057 19178.126096044092 18663.923020302118 19316.02162254915 17834.76706884786 18601.228767317214 18479.510266067944 17796.75227999648 17064.245989528124 18158.503960442955 0.9579942825725836 1.0491688174052265 1.056151219165539 1.0278337389996546 1.063745210763385 0.9821716099354698 1.024381127863766 1.017678015012926 0.9800781120936765 0.9397385394028828 1.0 14.148357726574892 -8.636982683783526 5.17010777167575 0.9906480945161602 1.0252139687892117 0.26252146661034803 0.03329649605444958 0.23171754896485236 9.688806100056585 0.004868307313481181 0.005517541395919653 2.3068391653204504e-09 8.636982683783526 0.03456587427305147 RLS(ph)MENEELLWK ddPTM_A549_MK2206_60min_R1 8 RLSMENEELLWK 12 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK 105.39 6.8352e-05 39815600.0 6790.5 6237.59 5014.25 4602.429999999999 9062.66 7802.09 6510.839999999999 6459.68 10005.869999999999 9814.050000000001 10179.019999999999 True False 7936.570388214453 6555.056688099 5725.346048712175 5730.0255566109345 7729.554719233111 8627.701985191807 7693.775350321962 7375.359421940324 7739.556421091062 7597.049288846256 7651.288407339703 1.037285482612456 0.8567258661705768 0.7482852225541496 0.7488968199282953 1.010229167654735 1.127614269109952 1.0055529135382615 0.9639369252981385 1.0115363595060258 0.9929111130562773 1.0 12.901486989639942 -6.783251074600507 24.744713625545195 1.0120530757909232 0.8413279690897443 0.49878234003590116 0.08093993929566996 128.24298953065636 145487.54204382314 0.011626234049683378 0.021985215677916264 1.6472098302156967e-07 6.783251074600507 -0.1707251067011789 RLS(ph)MENEELLWK ddPTM_A549_PD325901_60min_R1 4 RLSMENEELLWK 12 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK;RLS(1)MENEELLWK 130.47 3.023e-08 53124000.0 7106.330000000001 5942.59 6306.460000000001 5065.61 5872.38 6203.75 5642.07 5128.27 9253.0 7566.1 9764.5 True False 7827.759390196351 6443.39291482142 6734.454299424711 5378.501224864977 5459.924287411207 6153.228716846761 5856.782061309168 5025.982631800013 8864.128588174262 7088.3751547613 8563.528402265392 0.9140810916357326 0.7524226711406583 0.7864111594051795 0.6280706937857707 0.6375788145884868 0.718538951213029 0.6839216017266688 0.5869055832722458 1.035102375071162 0.827740018108207 1.0 13.063989632645333 -8.773964633047175 24.993833362780354 1.0165761556077924 0.7110245210577402 0.5031372860406367 0.10152394252043255 81.05392944186202 161740.56730030433 0.014713769193180662 0.01571609722819392 1.6828110959162625e-09 8.773964633047175 -0.3055516345500522 RLS(ph)MSEVKDDNSATK ddPTM_A549_MK2206_60min_R1 6 RLSMSEVKDDNSATK 15 2 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 RLS(0.938)MS(0.061)EVKDDNSATK;RLS(0.922)MS(0.077)EVKDDNS(0.001)ATK;RLS(0.998)MS(0.002)EVKDDNSATK;RLS(0.98)MS(0.02)EVKDDNSATK;RLS(0.993)MS(0.007)EVKDDNSATK;RLS(0.988)MS(0.012)EVKDDNSATK 124.69 4.4160000000000006e-08 59465000.0 12598.5 14992.7 14702.5 13189.8 22753.299999999996 17302.3 18393.600000000002 18787.7 27583.2 28392.300000000003 28038.199999999997 True False 14724.81879624766 15755.764391000663 16787.53557983561 16421.301592112617 19406.319711114247 19133.2179016628 21735.47902938515 21450.91400991815 21335.64924131923 21978.459710691255 21075.541125046624 0.6986685992488406 0.7475852836953342 0.7965411412324281 0.7791639367492772 0.9207981705414606 0.907839935788148 1.0313129755683588 1.0178108302246829 1.0123417052368582 1.0428420119933046 1.0 14.36328205310822 -6.85658722147676 0.9292590407743333 1.0095110737751753 0.7236798681233826 0.937202213433143 0.03054573180452551 0.08948612569597862 0.1467312226956352 0.004517784236316411 0.014582133836479197 1.3912743503781943e-07 6.85658722147676 -0.28583120565179276 RLS(ph)MSEVKDDNSATK ddPTM_A549_PD325901_60min_R1 7 RLSMSEVKDDNSATK 15 2 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 RLS(0.939)MS(0.061)EVKDDNSATK;RLS(0.997)MS(0.003)EVKDDNSATK;RLS(0.995)MS(0.005)EVKDDNSATK;RLS(0.955)MS(0.045)EVKDDNSATK;RLS(0.994)MS(0.006)EVKDDNSATK;RLS(0.916)MS(0.084)EVKDDNSATK;RLS(0.934)MS(0.066)EVKDDNSATK 112.58 3.4981000000000003e-07 140322000.0 22467.100000000002 23018.699999999997 23271.2 24479.100000000002 29154.600000000002 26863.300000000003 25996.2 26567.5 28434.399999999998 28330.1 29999.600000000002 True False 24747.943452595144 24958.566633134673 24850.523573093684 25991.118410930252 27106.88147390983 26644.534191298717 26985.499616666486 26037.59037069945 27239.401051289566 26541.332651154884 26309.839383132865 0.9406345319029562 0.9486400228325039 0.9445334580425169 0.9878858640084689 1.0302944491287145 1.0127212790352655 1.0256808954130971 0.9896521978538587 1.0353313319256765 1.0087987336087816 1.0 14.68331482068476 -6.42636744673412 3.0052203066449654 1.0160974000366594 0.9445865490523272 0.8516417375793152 0.012740163023022373 0.08046730139101749 1.3918738069110372 0.002143328774779224 0.005397166534682378 3.7465588024679383e-07 6.42636744673412 -0.07151085098433219 RLS(ph)NPCIQR ddPTM_A549_MK2206_60min_R1 2 RLSNPCIQR 9 1 Q5RGS4;Q9HB21-2 Q5RGS4 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 RLS(1)NPCIQR;RLS(1)NPCIQR 90.61399999999999 0.000442 21536500.0 1627.9099999999999 2391.3 1854.21 1279.35 2386.6 2004.3 1646.0300000000002 1531.2 2573.8999999999996 2132.02 2527.3 True False 1902.6614094217175 2513.0069559318795 2117.1648595468127 1592.790807432204 2035.5343015099024 2216.393695653337 1945.0923444425691 1748.2522891033334 1990.9157596736984 1650.395201247803 1899.7016600684187 1.0015580074574406 1.3228429541096323 1.1144722900703061 0.8384426043902277 1.0715020912476287 1.166706195105137 1.0238935856762454 0.9202772866137144 1.0480149602027482 0.8687654677252654 1.0 10.891557151989197 -6.0077119521377895 24.858786085040105 1.0183108369723024 1.176314773994979 0.24996951189411432 0.11379275068269024 300.2841279995026 967951.8339792924 0.013248218462372017 0.038817806128600855 9.823993079573084e-07 6.0077119521377895 0.15800393702267668 RLS(ph)NPCIQR ddPTM_A549_PD325901_60min_R1 1 RLSNPCIQR 9 1 Q5RGS4;Q9HB21-2 Q5RGS4 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 RLS(1)NPCIQR 76.165 0.00084261 18445000.0 3180.4 3439.8 3088.8 2872.5 3164.7 2523.8 2948.7 2796.8 2865.5 3525.1 2973.7 True False 3503.2718667132667 3729.6840179791498 3298.4245424632904 3049.927801079169 2942.422389622305 2503.2470095632225 3060.914392090553 2741.015629952844 2745.073000044674 3302.5245844026695 2607.953751837432 1.3433029110447374 1.4301189257483586 1.2647557649898462 1.1694715824352118 1.12824945133679 0.9598509972807462 1.173684307067941 1.0510215635617248 1.0525773312163358 1.2663278948393462 1.0 11.348702570417277 -6.330195066937556 1.057129391812211 1.0343022805019453 1.407988216284095 0.5829753019178487 0.09104184679417217 0.1605615756579545 0.3097835810939439 0.008828294378569893 0.04356323069139515 4.6752510137662025e-07 6.330195066937556 0.3736859357821498 RLS(ph)NVSLPGPGLSVPR ddPTM_A549_MK2206_60min_R1 3 RLSNVSLPGPGLSVPR 16 1 O94806;O94806-2;C9JKP8 O94806 PRKD3 Serine/threonine-protein kinase D3 1 RLS(0.91)NVS(0.09)LPGPGLSVPR;RLS(0.985)NVS(0.015)LPGPGLSVPR;RLS(0.992)NVS(0.008)LPGPGLSVPR 56.303999999999995 0.0044695 13633700.0 2081.94 2239.59 2467.04 2016.1800000000003 2903.9700000000003 2258.35 2810.39 2397.6000000000004 3196.51 3847.0299999999997 3806.79 True False 2433.3205734539697 2353.575564937682 2816.903368602458 2510.144190509759 2476.7998598657978 2497.327098028596 3321.001484722606 2737.467142342052 2472.505588777566 2977.983251121627 2861.458980940871 0.8503775834850075 0.8225089300996401 0.9844290578214885 0.8772252921425431 0.8655723798114366 0.8727460762717119 1.1605972711272745 0.9566683152109874 0.8640716519950205 1.040721978178573 1.0 11.482535210641283 RLS(ph)NVSLPGPGLSVPR ddPTM_A549_PD325901_60min_R1 2 RLSNVSLPGPGLSVPR 16 1 O94806;O94806-2;C9JKP8 O94806 PRKD3 Serine/threonine-protein kinase D3 1 RLS(0.999)NVS(0.001)LPGPGLSVPR;RLS(0.993)NVS(0.007)LPGPGLSVPR 111.49 1.6022000000000001e-07 23226000.0 849.1700000000001 1025.86 1201.48 1263.6100000000001 1136.01 1040.14 1094.72 846.31 1050.4099999999999 986.59 1219.63 True False 935.3771132740867 1112.3128224559828 1283.019657886168 1341.6603198334724 1056.2205766217448 1031.6694446973183 1136.380168653769 829.4296831326486 1006.2649205991715 924.2965390274967 1069.6232418715708 0.8744921357892455 1.0399108573124458 1.1995061510080944 1.2543298119493975 0.9874697325888556 0.9645166674689651 1.0624116269812822 0.7754409689914329 0.9407657586408292 0.8641328112973788 1.0 10.06288700390509 -6.973670502557029 24.779197296013688 0.9626145857389639 1.0991208979819032 0.274363760285529 0.11469391924359527 221.20415498657974 208178.2932926243 0.01608778886624504 0.030402475308547748 1.0625013669090149e-07 6.973670502557029 0.1365063122429393 RLS(ph)NVSLTGVSTIR ddPTM_A549_MK2206_60min_R1 1 RLSNVSLTGVSTIR 14 1 Q15139;F8WBA3;A0A494C0Q1 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 RLS(1)NVSLTGVSTIR 99.711 2.7255999999999998e-05 6955900.0 3034.5 3610.1 3447.4 3929.4 5572.8 4358.0 3823.9 3761.9 5982.6 5339.5 6479.6 True False 3546.6494135979315 3793.8386700161727 3936.293158165298 4892.103176397466 4753.048502243521 4819.160667393727 4518.65313263667 4295.160845335571 4627.55065224907 4133.303241556196 4870.5364921375885 0.728184547908268 0.7789365044570535 0.8081847173344412 1.0044279894616728 0.9758778134434009 0.9894517113614082 0.9277526490009967 0.8818660638862197 0.9501110729216861 0.848634077216854 1.0 12.249864979334562 -6.130906739755986 3.752626568204954 0.9680722024476391 0.7601421918697899 0.6964159348836574 0.0508025978617975 0.06993480809626586 1.740321731131296 0.005730058877325648 0.01656640709636932 7.397641146883664e-07 6.130906739755986 -0.2079300105778492 RLS(ph)NVSLTGVSTIR ddPTM_A549_PD325901_60min_R1 4 RLSNVSLTGVSTIR 14 1 Q15139;F8WBA3;A0A494C0Q1 Q15139 PRKD1 Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 RLS(1)NVSLTGVSTIR;RLS(0.995)NVS(0.005)LTGVSTIR;RLS(1)NVSLTGVSTIR;RLS(0.996)NVS(0.004)LTGVSTIR 238.69 8.977e-58 121161500.0 16214.5 14143.0 15573.5 17587.9 21486.8 18056.4 17927.2 19235.2 19993.2 19752.5 20699.5 True False 17860.584103515994 15334.880244862816 16630.411361063223 18674.264637980978 19977.64129343588 17909.354664980332 18609.429406140247 18851.538846277515 19152.955332225836 18505.32377901726 18153.592724941645 0.9838594692595984 0.8447297720739249 0.9160947704976499 1.0286814803509372 1.1004786543430676 0.9865460207430042 1.0251099982303953 1.0384467213686548 1.0550504036543213 1.0193752861708947 1.0 14.147967475623151 -6.250696721123053 6.024918470613922 1.0300775085613485 0.9070303828389977 0.6167516353616884 0.04090442878039408 0.07485222452922266 11.715709063569523 0.005582833241460924 0.014302755164461566 5.614399069283045e-07 6.250696721123053 -0.12304712572235077 RLS(ph)PAER ddPTM_A549_MK2206_60min_R1 4 RLSPAER 7 1 P41212 P41212 ETV6 Transcription factor ETV6 1 RLS(1)PAER;RLS(1)PAER;RLS(1)PAER;RLS(1)PAER 76.22800000000001 0.0074343000000000005 635696000.0 8613.54 8560.279999999999 8732.25 8090.09 11732.71 8659.74 7649.99 8562.93 12350.830000000002 12654.85 12708.3 True False 10067.294971165698 8995.961688087875 9970.614355859183 10072.162413177939 10006.84390122696 9576.107938929816 9039.894159925527 9776.751550373305 9553.386725222705 9796.110595824975 9552.478378762913 1.0538935103530123 0.9417411200937876 1.0437725122755441 1.054403057909075 1.0475651976846336 1.0024736575399569 0.9463401853934614 1.0234780088180044 1.0000950901351224 1.0255046080610564 1.0 13.221659371828823 -7.4946458182543605 23.602287468948315 0.9974664834051346 1.0257040965814719 0.13948463067807249 0.03511331365660354 549.4533121328477 459334.16487119085 0.004940792666736478 0.00788546396485755 3.201504980234842e-08 7.4946458182543605 0.02823761317633733 RLS(ph)PAER ddPTM_A549_PD325901_60min_R1 2 RLSPAER 7 1 P41212 P41212 ETV6 Transcription factor ETV6 1 RLS(1)PAER;RLS(1)PAER 70.908 0.0087464 576400000.0 1498.24 1857.5900000000001 1548.4299999999998 1605.5500000000002 1598.15 1508.58 1703.25 1762.28 1628.74 1832.32 2100.71 True False 1650.3402218540075 2014.1356285126722 1653.5157712660045 1704.7211770313875 1485.9014573181933 1496.2946246481042 1768.0681108041636 1727.1299429180842 1560.2897218959206 1716.627002494312 1842.3359874978682 0.8957867799648119 1.0932509825464194 0.8975104337573593 0.9253041728542797 0.8065312013669345 0.8121724999142349 0.959688201719074 0.9374674080289509 0.8469083448861013 0.9317665258364272 1.0 10.847320474915614 -5.855865176729255 20.804248070251305 0.9116904268386639 0.9949506774892622 0.18979214949751366 0.07148685726991652 6.08055695432336 1329.5662656213674 0.0110534073902688 0.03436668079132693 1.3935893645431078e-06 5.855865176729255 0.08326025065059839 RLS(ph)PEK ddPTM_A549_MK2206_60min_R1 2 RLSPEK 6 1 Q9NQT8;E7ERX9 Q9NQT8 KIF13B Kinesin-like protein KIF13B;Kinesin-like protein 1 RLS(1)PEK;RLS(1)PEK 78.516 0.018397 49307000.0 4180.9 4080.9 3730.3999999999996 3592.6000000000004 4340.6 4076.5 4146.5 4284.9 4551.1 5295.5 6129.299999999999 True False 4886.533706808892 4288.600379066784 4259.426813604407 4472.787161277943 3702.10348995805 4507.872524238301 4899.865376834634 4892.2976969559 3520.2831166133005 4099.242872115524 4607.2256499257555 1.0606239151511143 0.9308422692810572 0.9245101363057932 0.9708200772302136 0.8035429065684483 0.9784353679987313 1.0635175589703523 1.061874991305177 0.7640787285228865 0.8897421536497963 1.0 12.169682543784281 -8.747154069117663 24.999754798287427 0.8885927156954776 0.9684723101422071 0.16878999989516208 0.08781252627458687 421.3683362685882 737407.7437372104 0.018571349529211495 0.021009219850182174 1.7899707362831745e-09 8.747154069117663 0.07987959444672954 RLS(ph)PEKQNCR ddPTM_A549_MK2206_60min_R1 1 RLSPEKQNCR 10 2 Q9NQT8;E7ERX9 Q9NQT8 KIF13B Kinesin-like protein KIF13B;Kinesin-like protein 1 RLS(1)PEKQNCR 71.888 0.00049409 11577000.0 1272.9 1585.8 1327.3 1132.5 1690.6 1035.6 1097.5 1267.6 1893.0 1792.9 1932.7 True False 1487.7344005828982 1666.510446500553 1515.5310984605208 1409.9625508398576 1441.9149795242774 1145.186504624355 1296.9015437298947 1447.2861818621896 1464.2385224998302 1387.8826447768713 1452.7572501935792 1.024076390177821 1.147136210319027 1.0432101428222622 0.9705424293370284 0.9925367636830881 0.7882848318063871 0.8927173094865527 0.9962340106506709 1.0079030906951048 0.9553438088792443 1.0 10.504577939319056 -6.088542485647651 3.941377690085147 0.9775192774518762 1.087868659483092 0.33655852107791917 0.06964073400521069 0.2339802788292057 6.617226328003484 0.01057034778045163 0.030819589836710695 8.155629992962828e-07 6.088542485647651 0.1103493820312158 RLS(ph)PEKQNCR ddPTM_A549_PD325901_60min_R1 2 RLSPEKQNCR 10 2 Q9NQT8;E7ERX9 Q9NQT8 KIF13B Kinesin-like protein KIF13B;Kinesin-like protein 1 RLS(1)PEKQNCR;RLS(1)PEKQNCR 45.28 0.0097968 34444000.0 3846.9 4033.3 4607.200000000001 3945.1000000000004 3966.8 4161.5 3981.9 4079.3 3118.3 4401.4 4893.6 True False 4237.434456061898 4373.200345867582 4919.872297344237 4188.779867027828 3688.185652717085 4127.610123740928 4133.433383479285 3997.9351613510585 2987.2486951803535 4123.494852852375 4291.718223086277 0.98735150720465 1.0189858976162487 1.1463642395903242 0.9760146517763638 0.8593727409402993 0.9617616789325617 0.9631185386879464 0.9315465166946696 0.6960495866460104 0.9608027923806868 1.0 12.067339642326665 -6.944739137212722 0.9089864698250131 0.8659430418513793 1.0495200620892733 0.20332401185566673 0.09366031449648755 0.6327057619678436 1.000243947495924 0.020946209360686217 0.06376018403263004 1.1356927746592797e-07 6.944739137212722 0.18357702023789402 RLS(ph)PIMLGK ddPTM_A549_PD325901_60min_R1 4 RLSPIMLGK 9 1 Q6ICB0 Q6ICB0 DESI1 Desumoylating isopeptidase 1 1 RLS(1)PIMLGK;RLS(1)PIMLGK;RLS(1)PIMLGK;RLS(1)PIMLGK 92.611 0.00041827 23346300.0 5365.9 5608.700000000001 6878.200000000001 5558.6 7200.799999999999 6605.0 6985.700000000001 6130.0 6926.7 5986.9 6298.1 True False 5910.642217833197 6081.36483273436 7344.9960139766235 5901.9420975034545 6695.04064941141 6551.211069880771 7251.544636221717 6007.732341108027 6635.594887248102 5608.886112269254 5523.4736269453315 1.070095128000454 1.1010036878002731 1.329778416637187 1.068520010435431 1.2121069279213694 1.186067230939928 1.3128594659792134 1.0876728571311214 1.2013445406668506 1.0154635454231649 1.0 12.431360125623234 -10.759371265419789 0.80347810963687 0.989007339361631 1.178669782960698 0.35767045693013577 0.08583149413700658 0.611478522655609 0.6330444790761014 0.0748457521246068 0.015160811293934838 1.740318490842159e-11 10.759371265419789 0.18966244359906703 RLS(ph)PISGSR ddPTM_A549_MK2206_60min_R1 2 RLSPISGSR 9 1 E9PQ01 E9PQ01 PCF11 1 RLS(1)PISGSR;RLS(1)PISGSR 129.34 2.109e-05 75164000.0 1331.1799999999998 1889.8500000000001 1562.49 1435.25 2098.85 1816.0 1571.62 1816.31 2527.59 2417.2 2385.9 True False 1555.8506397736996 1986.0352927980007 1784.0745769860478 1786.8863144308211 1790.1119453297833 2008.1679146367599 1857.1630106212092 2073.7775047160894 1955.0949007318256 1871.1528411816912 1793.41518250989 0.8675351111928705 1.1074040814233201 0.9947917216186549 0.9963595333959805 0.9981581302465145 1.1197451288587414 1.0355454937222646 1.1563287324320695 1.0901518621001438 1.0433461584522816 1.0 10.808493800982955 -7.1294951735707475 19.64228665759742 1.0573529398990484 0.9994993686943761 0.2521292122447969 0.06593258134429285 5.08995928204082 765.0065038550562 0.009939666976659416 0.017216079307991062 7.421724456514133e-08 7.1294951735707475 -0.05785357120467238 RLS(ph)PISGSR ddPTM_A549_PD325901_60min_R1 4 RLSPISGSR 9 1 E9PQ01 E9PQ01 PCF11 1 RLS(1)PISGSR;RLS(1)PISGSR;RLS(1)PISGSR;RLS(1)PISGSR 138.0 1.8084e-05 110247000.0 4952.1 4869.45 4788.530000000001 4688.139999999999 5027.08 5147.24 5812.1 5056.129999999999 4631.56 5348.41 5647.08 True False 5454.833546456658 5279.815640836263 5113.508441570103 4977.715760261551 4673.995243284512 5105.322584001985 6033.282646003158 4955.281520692748 4436.91163988376 5010.71047983464 4952.52495978953 1.10142474611344 1.0660856196998636 1.032505334771178 1.0050864560353656 0.9437600579973948 1.0308524692864847 1.2182235718120555 1.0005565970743406 0.8958887993312238 1.011748657607489 1.0 12.273948530705438 -8.521919015273365 24.994461110632653 0.9506988092471504 1.0532458869181123 0.2263265490604518 0.07013210876604878 34.6139961447178 901469.9733116033 0.012566459218630206 0.014338582761527231 3.006636910642826e-09 8.521919015273365 0.10254707767096183 RLS(ph)PPSSSAASSYSFSDLNSTR ddPTM_A549_MK2206_60min_R1 4 RLSPPSSSAASSYSFSDLNSTR 22 1 P50402 P50402 EMD Emerin 1 RLS(0.762)PPS(0.079)S(0.079)S(0.079)AASSYSFSDLNSTR;RLS(0.755)PPS(0.081)S(0.081)S(0.081)AASSYSFSDLNSTR;RLS(1)PPSSSAASSYSFSDLNSTR;RLS(0.999)PPS(0.001)SSAASSYSFSDLNSTR 314.14 2.868299999999999e-176 215748000.0 20076.2 22966.6 20684.3 17024.6 24920.8 20332.7 18050.3 20361.9 29367.2 27811.9 27063.3 True False 23464.571744035184 24135.50184172003 23617.6447674881 21195.62776426333 21254.983332384138 22484.292818246075 21329.805863132322 23248.26168070346 22715.576089781818 21529.17247379658 20342.735700917845 1.1534619575761624 1.1864432688191027 1.1609866595485725 1.041926124189236 1.0448439012765196 1.1052738013615153 1.048521997076821 1.1428286746926826 1.1166431311771363 1.0583223805451696 1.0 14.312226086117185 -14.999999999999998 0.18798020654635558 0.5197779489059682 1.1341795538656232 0.2927628972654066 0.04866823064579468 37.03827994106182 0.42171583915352384 6.577545260987141 0.051113495827173186 1.000000000000004e-15 14.999999999999998 0.614401604959655 RLS(ph)PPSSSAASSYSFSDLNSTR ddPTM_A549_PD325901_60min_R1 2 RLSPPSSSAASSYSFSDLNSTR 22 1 P50402 P50402 EMD Emerin 1 RLS(1)PPSSSAASSYSFSDLNSTR;RLS(1)PPSSSAASSYSFSDLNSTR 334.16 2.351199999999999e-218 279740000.0 20862.3 24515.0 20479.0 22012.0 24759.0 21691.6 23494.0 22265.1 25543.0 26928.0 25700.0 True False 22980.225337986467 26580.965085399992 21868.828090231076 23371.631247120873 23020.01325391305 21514.95080142706 24388.077026410094 21821.005113866933 24469.516538175227 25227.76148443878 22539.062925722836 1.0195732366388734 1.179328757943362 0.9702634116733021 1.0369389057629306 1.021338523689968 0.9545627904908593 1.0820359793475292 0.9681416297464428 1.085649240113228 1.1192906097106394 1.0 14.460139915444877 -5.772418700980451 24.999996845785848 1.028409135624416 1.0994510262688277 0.17628084120303733 0.06072954701096842 215.80953505610668 491404.1041168026 0.007314115588069884 0.02306545900288995 1.6888119719703941e-06 5.772418700980451 0.07104189064441169 RLS(ph)PPSSSAASSYSFSDLNSTRGDADMYDLPK ddPTM_A549_MK2206_60min_R1 1 RLSPPSSSAASSYSFSDLNSTRGDADMYDLPK 32 2 P50402 P50402 EMD Emerin 1 RLS(0.922)PPS(0.026)S(0.026)S(0.026)AASSYSFSDLNSTRGDADMYDLPK 93.34 1.4282e-09 10113000.0 2069.0 2665.7 2245.3 1983.2 3003.9 1815.6 2391.0 2135.9 3990.9 3820.5 3280.2 True False 2418.196617806595 2801.372743874717 2563.71730232307 2469.0840890292307 2562.0302892422674 2007.7255869022586 2825.413750394697 2438.670365919416 3086.967522157724 2957.446396547513 2465.6358110855185 0.9807598538820549 1.136166473280329 1.0397793910992759 1.0013985349856651 1.0390951809360323 0.8142831061568412 1.1459169021197755 0.9890634922461518 1.251996547210538 1.1994660295128785 1.0 11.267744005594123 RLS(ph)PPSSSAASSYSFSDLNSTRGDADMYDLPK ddPTM_A549_PD325901_60min_R1 2 RLSPPSSSAASSYSFSDLNSTRGDADMYDLPK 32 2 P50402 P50402 EMD Emerin 1 RLS(0.941)PPS(0.017)S(0.021)S(0.021)AASSYSFSDLNSTRGDADMYDLPK;RLS(0.958)PPS(0.014)S(0.014)S(0.014)AASSYSFSDLNSTRGDADMYDLPK 89.086 1.4719e-09 26385500.0 5180.4 5275.6 5999.5 5772.7 6583.6 6692.200000000001 5761.6 6842.200000000001 5898.8 7704.0 6932.9 True False 5706.3103943910855 5720.193326719808 6406.662147924279 6129.266568247078 6121.190648187007 6637.700941991843 5980.860840868494 6705.726953397936 5650.893949629567 7217.5681252271315 6080.197251274082 0.9385074461515783 0.9407907491029446 1.0536931423699762 1.0080703495207681 1.0067421162864962 1.0916917112517917 0.9836623046423745 1.1028798369975212 0.9293931950062054 1.1870615091829 1.0 12.569902412412999 -11.780674017096642 5.328443372631935 1.000714307485591 0.9887046940776066 0.0 0.08086750106104659 1.737704543692312 98.44043256555159 0.06568674256818986 0.008599521249641445 1.6570132565420316e-12 11.780674017096642 -0.012009613407984454 RLS(ph)PQLQHNITEDAYCETHLEPTR ddPTM_A549_MK2206_60min_R1 1 RLSPQLQHNITEDAYCETHLEPTR 24 1 Q8N7C3-2 Q8N7C3-2 1 RLS(1)PQLQHNITEDAYCETHLEPTR 114.06 2.4817999999999997e-16 27842000.0 1077.7 1250.0 1112.9 715.82 1334.0 896.08 747.86 1222.9 1895.2 1485.2 1649.7 True False 1259.5894127647016 1313.6196608183195 1270.7259545518832 891.1959321343807 1137.7703671391143 990.9025908302361 883.7364815433616 1396.2498199741817 1465.940226012508 1149.6922884838025 1240.0339605962372 1.0157700940376355 1.0593416814058065 1.024750930160726 0.7186867137944133 0.9175316187244161 0.7990931073805326 0.712671192584468 1.1259770815493089 1.1821774827099492 0.9271458081123872 1.0 10.27616391665558 -8.295590356177195 24.740520963181567 1.0914281626199789 0.8947284237498973 0.27161628167393015 0.12693340590505509 474.5850863618986 343809.7748399971 0.021680763718590818 0.026211429467914032 5.063020010229973e-09 8.295590356177195 -0.19669973887008163 RLS(ph)PQLQHNITEDAYCETHLEPTR ddPTM_A549_PD325901_60min_R1 3 RLSPQLQHNITEDAYCETHLEPTR 24 1 Q8N7C3-2 Q8N7C3-2 1 RLS(1)PQLQHNITEDAYCETHLEPTR;RLS(1)PQLQHNITEDAYCETHLEPTR;RLS(1)PQLQHNITEDAYCETHLEPTR 166.28 4.6049e-35 76924000.0 2412.08 2760.8900000000003 3129.9700000000003 3318.25 3241.9200000000005 2700.5800000000004 3521.7 2481.3 2629.28 3670.66 3626.83 True False 2656.9525859205546 2993.5598896442993 3342.3885862386123 3523.210766207472 3014.2187232168426 2678.5873718544462 3655.7202206481857 2431.808524957808 2518.780505167495 3438.8939011612447 3180.7529023696247 0.8353219088289301 0.9411482065815711 1.0508167999307871 1.107665661039787 0.9476431573704716 0.8421236902303632 1.1493254373594113 0.7645386484269615 0.7918818539129626 1.0811571997935796 1.0 11.635152584746846 -8.279429386820041 24.946740586100837 0.888687241601641 0.9812127905615644 0.06559788643908537 0.12309579453241931 1366.0689159108144 1894323.0267188582 0.020109975587694465 0.024335777318056834 5.254974502953396e-09 8.279429386820041 0.09252554895992338 RLS(ph)PQPQIR ddPTM_A549_MK2206_60min_R1 2 RLSPQPQIR 9 1 J3QT39;Q49A88-5;Q49A88;C9JU82;A0A0A0MR27;Q49A88-2;Q49A88-3;Q49A88-6 J3QT39 CCDC14 Coiled-coil domain-containing protein 14 1 RLS(1)PQPQIR;RLS(1)PQPQIR 85.973 0.00051468 37487000.0 3094.8999999999996 4406.5 3120.0 3481.8 4929.4 3673.9 3137.8 3797.7999999999997 5786.700000000001 5653.4 5799.6 True False 3617.243456959707 4630.772028316741 3562.4629150883943 4334.841156303942 4204.291789936692 4062.6696594625555 3707.8976436589205 4336.149780274711 4476.02168946105 4376.293013543179 4359.399259182846 0.8297573224889124 1.0622500379065445 0.8171912466113886 0.9943666314051932 0.964419989997606 0.9319333738254771 0.8505524323904098 0.9946668158785498 1.0267519498317446 1.0038752482523243 1.0 12.089913624822264 -8.497666153490519 22.83953816305621 1.0125316383793892 0.927385466156233 0.25937548078284545 0.06880717224622895 239.7350830160488 217170.90353418945 0.01013341353508767 0.012216775279458634 3.179317104376087e-09 8.497666153490519 -0.08514617222315624 RLS(ph)PQPQIR ddPTM_A549_PD325901_60min_R1 2 RLSPQPQIR 9 1 J3QT39;Q49A88-5;Q49A88;C9JU82;A0A0A0MR27;Q49A88-2;Q49A88-3;Q49A88-6 J3QT39 CCDC14 Coiled-coil domain-containing protein 14 1 RLS(1)PQPQIR;RLS(1)PQPQIR 99.73200000000001 0.00033365 54936000.0 5980.5 5892.3 6216.9 6222.7 6748.200000000001 6426.4 6236.1 6469.0 6735.8 7737.0 7835.1 True False 6587.63595738859 6388.864800028646 6638.816219256675 6607.062046222928 6274.229712026175 6374.065529066129 6473.418198024857 6339.970720167672 6452.717750375472 7248.484499595318 6871.432370791093 0.9586990894927735 0.9297719100294529 0.9661473563323979 0.9615261694647621 0.9130890582139043 0.9276181711633869 0.9420769715411732 0.9226563514060702 0.9390644340479167 1.0548724208371736 1.0 12.746395149184453 -10.5456750882438 0.8186472020763953 1.0005871207436203 0.9396508558518828 0.6291866245384341 0.023783429783405252 0.31491922961602364 0.37341782169145127 0.011638978977887945 0.00315670567113146 2.846589950185458e-11 10.5456750882438 -0.060936264891737535 RLS(ph)PS(ph)AS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 3 RLS(1)PS(1)AS(1)PPR;RLS(1)PS(1)AS(1)PPR 56.225 0.0057361 5009300.0 2999.8 2685.0 2495.2 2333.55 2889.7 2527.0 1972.54 2690.6 3601.1000000000004 4004.7 4693.2 True False 3506.092901931478 2821.65503143775 2849.0568800412066 2905.2698547570412 2464.6289579624436 2794.40546271316 2330.9249850286724 3072.0007896169204 2785.456599775032 3100.035488615056 3527.748914269419 0.9938612376151986 0.7998457656735194 0.8076132823730834 0.8235477992794478 0.6986406963356283 0.7921214152770475 0.6607400474564094 0.8708104982162876 0.7895847089650051 0.8787574070466575 1.0 11.784532166127484 -10.628797116296056 0.756763067275437 1.0095146101519918 0.7974270862559807 0.2163233263783899 0.08860542844013078 0.5286813881355422 0.5020098060723572 0.06762213997128501 0.01534684431439886 2.350730724676693e-11 10.628797116296056 -0.21208752389601115 RLS(ph)PS(ph)AS(ph)PPR ddPTM_A549_PD325901_60min_R1 4 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 3 RLS(1)PS(1)AS(1)PPR;RLS(1)PS(1)AS(1)PPR;RLS(1)PS(1)AS(1)PPR;RLS(1)PS(1)AS(1)PPR 66.267 0.0018944000000000003 21263800.0 13855.41 14070.91 15048.25 12796.970000000001 14371.169999999998 12831.039999999999 13071.02 13521.279999999999 15523.36 14909.98 15967.369999999999 True False 15262.001023386247 15256.714967562944 16069.51473747838 13587.409772872461 13361.788597045028 12726.54826435775 13568.444818836586 13251.587463161039 14870.967163138543 13968.561318246891 14003.48471549802 1.089871652196356 1.089494170738655 1.1475368498595089 0.97028775686347 0.9541759689470143 0.9088129506988321 0.9689334543865382 0.9463064181799808 1.0619476127024623 0.9975060923791006 1.0 13.773498260733499 -6.264214180063738 24.980569607494566 1.0024792043595707 1.1070202200752988 0.5971351050109757 0.04495832977843132 181.98378457698186 1638345.1092259074 0.007950640139143319 0.019241350128362922 5.442341878596433e-07 6.264214180063738 0.10454101571572805 RLS(ph)PS(ph)ASPPR ddPTM_A549_PD325901_60min_R1 1 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RLS(0.963)PS(0.692)AS(0.346)PPR 100.09 0.00075404 56173000.0 10589.0 10922.0 9677.5 10794.0 12684.0 11229.0 10644.0 11897.0 12628.0 11956.0 12589.0 True False 11663.9874847902 11842.43527076233 10334.273345534993 11460.720865047371 11793.119597424497 11137.55474696309 11049.063244620287 11659.705001984054 12097.289075052922 11201.096119576272 11040.632808246108 1.056460049652092 1.0726228719351454 0.9360218318117107 1.038049273451745 1.0681561285704897 1.0087786579266174 1.0007635827149222 1.0560721658341512 1.0957061325341435 1.014533887152765 1.0 13.430535243980255 -8.295008598911542 24.693891722106546 1.0472731722746342 1.0256225260240392 0.024686040253542485 0.04240848181064313 1596.9103530628752 1174703.5127086872 0.008013171688403799 0.009687631928688214 5.069806700972101e-09 8.295008598911542 -0.021650646250594985 RLS(ph)PSAS(ph)PPR ddPTM_A549_MK2206_60min_R1 4 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RLS(0.999)PS(0.467)AS(0.534)PPR;RLS(0.998)PS(0.017)AS(0.985)PPR;RLS(0.998)PS(0.1)AS(0.901)PPR;RLS(0.988)PS(0.09)AS(0.922)PPR 123.2 5.0236000000000005e-05 240398000.0 14323.099999999999 14983.5 13651.599999999999 12970.0 18154.7 14510.399999999998 13288.66 14013.3 20378.4 20772.7 22987.3 True False 16740.489113825835 15746.096150297048 15587.602157570742 16147.650582245418 15484.16767938567 16045.880896776012 15703.03751079883 15999.728188931384 15762.724937617813 16080.132642733293 17278.918992794996 0.968838914101416 0.9112894248108283 0.9021167449231342 0.9345289823384613 0.8961305788772026 0.9286391644909535 0.9087974495017147 0.9259681230986144 0.9122517990963782 0.9306214497237023 1.0 14.076725341696799 -10.712254864411134 0.7761178950036429 1.004901979144177 0.9191351287012207 0.11704474976857526 0.027579555011271954 0.29966089795191886 0.291267242642118 0.016077565012242376 0.0033552852723986635 1.9397472086950677e-11 10.712254864411134 -0.08576685044295618 RLS(ph)PSAS(ph)PPR ddPTM_A549_PD325901_60min_R1 3 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RLS(0.999)PS(0.009)AS(0.991)PPR;RLS(0.996)PS(0.269)AS(0.735)PPR;RLS(1)PS(0.021)AS(0.979)PPR 113.54 2.6026999999999997e-05 251078000.0 12336.2 12697.0 14198.699999999999 14130.8 15026.1 13668.5 13489.2 13726.9 14732.1 14760.5 15596.499999999998 True False 13588.561942569537 13767.020750125372 15162.30916571922 15003.627422624733 13970.718573230872 13557.188267776724 14002.538887573472 13453.106210955271 14112.961069257773 13828.519510957305 13678.229374359395 0.9934445146856549 1.0064914378415397 1.1084994081282051 1.096898363961484 1.0213835571013135 0.991150820528747 1.0237099045744922 0.9835414981542765 1.0317827463628668 1.0109875432327255 1.0 13.739593867217696 -6.979290269271203 24.956028862542624 1.0117416346538604 1.0530796336530535 0.2671669916785512 0.03387247412731136 272.898797873523 328851.58265923685 0.005111046463612036 0.009658344964888712 1.0488411806700325e-07 6.979290269271203 0.041337998999193104 RLS(ph)PSASPPR ddPTM_A549_MK2206_60min_R1 1 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RLS(0.994)PS(0.005)ASPPR 50.292 0.011486 2767400.0 585.6 718.72 643.15 580.71 862.83 398.36 431.06 491.85 895.85 734.11 1125.7 True False 684.4349634545886 755.2997780986742 734.358340974071 722.9839760690627 735.9088499839892 440.5141907900332 509.3780222689826 561.5712437274517 692.9414053784851 568.2740411384625 846.1576222605233 0.8088740743433946 0.8926230269968839 0.8678741662956615 0.8544317950331756 0.8697065778572048 0.5206053567338821 0.6019895216545721 0.6636721444725692 0.818927097208297 0.6715935969711051 1.0 9.724782623418008 -9.974241366838873 0.9980809312586459 0.976750428922035 0.7659066099618119 0.0 0.1478937853985457 0.43187368971391094 0.871744397549541 0.046721827530167126 0.0251370833064249 1.0611056650532646e-10 9.974241366838873 -0.21084381896022308 RLS(ph)PSASPPR ddPTM_A549_PD325901_60min_R1 1 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RLS(0.809)PS(0.176)AS(0.015)PPR 59.11600000000001 0.014416 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RLS(ph)QAEER ddPTM_A549_MK2206_60min_R1 2 RLSQAEER 8 1 D6RBP0;Q96NL6-3;Q96NL6-2;Q96NL6 D6RBP0 SCLT1 Sodium channel and clathrin linker 1 1 RLS(1)QAEER;RLS(1)QAEER 64.73 0.007461700000000001 7071900.0 1370.8 1651.21 1267.3600000000001 1140.27 1753.74 1128.45 825.02 1098.6100000000001 1554.96 1546.28 1836.6 True False 1602.1575271577008 1735.2495361118542 1447.0907051494974 1419.6362011886647 1495.7671691653302 1247.8618299955137 974.9154547681447 1254.3413318520204 1202.7640427608744 1196.9742740619 1380.5215324186513 1.1605451197495968 1.256952170149585 1.0482203074473007 1.0283332551151774 1.0834797821260855 0.9039060968569466 0.7061935883463611 0.9085996142736251 0.8712388865486591 0.8670449869512867 1.0 10.43099767492153 -6.363713916311149 1.0217931494062429 0.9179478761358894 1.2103399878716312 0.6353209348041209 0.08874782761895907 0.364260595713218 0.6562873238997049 0.015377289567014124 0.07534070407259573 4.3279883561260225e-07 6.363713916311149 0.29239211173574187 RLS(ph)QAEER ddPTM_A549_PD325901_60min_R1 1 RLSQAEER 8 1 D6RBP0;Q96NL6-3;Q96NL6-2;Q96NL6 D6RBP0 SCLT1 Sodium channel and clathrin linker 1 1 RLS(1)QAEER 43.958 0.051601999999999995 2990900.0 796.1 863.67 949.06 997.95 783.36 1123.3 710.66 855.18 1077.4 959.26 1010.4 True False 876.9194859421556 936.4545019501287 1013.4689187613996 1059.591104991108 728.3394960452904 1114.152217228928 737.7045551880731 838.1227640242681 1032.1206247594253 898.6921598916643 886.1272054533212 0.9896090319149438 1.0567946635506595 1.1437059064707684 1.1957550772284968 0.821935599723168 1.257327627875904 0.8325041265499589 0.9458266926761434 1.1647544713757179 1.0141796283434446 1.0 9.791370005376464 -3.8985898729352466 15.583437673496624 1.0580853548804954 1.0575689005303708 0.0 0.13704926576350288 0.0 0.0 0.01696402251908019 0.0 0.00012630197073610898 3.8985898729352466 -0.0005164543501245955 RLS(ph)QPESAEK ddPTM_A549_MK2206_60min_R1 6 RLSQPESAEK 10 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(0.998)QPES(0.002)AEK;RLS(1)QPESAEK;RLS(0.997)QPES(0.003)AEK 140.45 5.2523999999999994e-08 488036000.0 35408.600000000006 35838.9 33572.9 31039.1 39744.8 28854.100000000002 29567.399999999998 30849.800000000003 41149.100000000006 42245.5 44828.3 True False 41384.70602284517 37662.94692968136 38334.04205191385 38643.68089339814 33898.39256961821 31907.421710198563 34939.413853375205 35222.853623550145 31828.89455161001 32702.212209226 33696.19591186053 1.2281714568343427 1.1177210337984946 1.1376370837878726 1.1468262172524992 1.0060005781746573 0.9469146545105305 1.0368949048363374 1.0453065300214572 0.94458420870015 0.970501604832946 1.0 15.040298108972298 -6.784885588689526 4.148080091252655 0.9825354224638969 1.155206671189499 0.8007254575166118 0.03946892216298448 0.0701060260566986 2.6909662688838933 0.0060474642338429006 0.012234346791008974 1.6410220300210603e-07 6.784885588689526 0.17267124872560213 RLS(ph)QPESAEK ddPTM_A549_PD325901_60min_R1 4 RLSQPESAEK 10 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(1)QPESAEK 156.52 1.1789e-08 700057000.0 30874.0 34033.8 34967.7 35017.5 39674.5 35575.6 35824.6 32978.4 38207.7 38576.4 43268.5 True False 34008.30575176247 36901.947767631485 37340.818399861964 37180.45144448735 36887.89998959466 35285.88410865258 37187.92475697332 32320.61994094569 36601.96323985584 36140.6795205104 37946.74880162021 0.8962113178536765 0.9724666521643057 0.9840320865187698 0.9798059812412666 0.9720964550201376 0.9298789810194749 0.980002923343607 0.8517362082826367 0.9645612442637785 0.9524051641274549 1.0 15.211688663379668 -9.784927524988303 1.3820503809874678 0.9926939488635333 0.9499142792856153 0.03474576691116216 0.04137775557317635 0.47236093243269145 1.818011271613548 0.010524124161413167 0.007242430714756284 1.6408635774721358e-10 9.784927524988303 -0.04277966957791801 RLS(ph)QRPTPEELEQR ddPTM_A549_MK2206_60min_R1 2 RLSQRPTPEELEQR 14 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RLS(0.697)QRPT(0.303)PEELEQR;RLS(1)QRPTPEELEQR 199.09 4.9775e-32 63902000.0 1397.9 2094.66 1860.37 1545.3400000000001 2228.59 1744.3000000000002 1533.8200000000002 1688.63 2587.4 1994.7800000000002 2502.5 True False 1633.831344626312 2201.2692469837616 2124.1984401740383 1923.9483693729487 1900.7673631953219 1928.8806682273691 1812.4952399123345 1927.998473712489 2001.3580312287697 1544.1578125651229 1881.0601845136 0.86856941531022 1.1702279730900584 1.129255968342825 1.0228000067262275 1.0104766337855466 1.0254220912799419 0.9635498400499105 1.0249531033538015 1.0639521519330206 0.8208976115054009 1.0 10.877330293284102 RLS(ph)QRPTPEELEQR ddPTM_A549_PD325901_60min_R1 4 RLSQRPTPEELEQR 14 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RLS(0.999)QRPT(0.001)PEELEQR;RLS(0.903)QRPT(0.097)PEELEQR;RLS(0.999)QRPT(0.001)PEELEQR;RLS(0.999)QRPT(0.001)PEELEQR 153.75 2.6456e-15 260014000.0 7106.22 9423.86 8709.09 8552.36 9926.66 8810.119999999999 9239.3 9860.28 10032.18 10269.03 10810.779999999999 True False 7827.638223077333 10218.041755239545 9300.141219412593 9080.619853381184 9229.445646717904 8738.373303705977 9590.90661743895 9663.608980159986 9610.5623624457 9620.641693276377 9481.122595180781 0.8256024689582743 1.07772488464956 0.9809113979962478 0.957757877532016 0.973454942077133 0.9216601954021415 1.0115792218860213 1.0192473394523938 1.013652367213426 1.014715461876478 1.0 13.210842173597412 -7.807504046015764 24.98998512139151 1.0081243359441219 0.963690134104934 0.18882062104701713 0.05603686108712338 181.66821086691758 98554.04034558828 0.007934552287677872 0.010963183632697566 1.5577435223649015e-08 7.807504046015764 -0.04443420183918789 RLS(ph)QRPTTEELEQR ddPTM_A549_MK2206_60min_R1 2 RLSQRPTTEELEQR 14 2 J3KP75;O75167-5;O75167-2;O75167;O75167-4 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 RLS(0.85)QRPT(0.087)T(0.063)EELEQR;RLS(0.98)QRPT(0.02)TEELEQR 160.55 7.3978e-20 25651200.0 2013.69 2257.07 1747.12 1481.9299999999998 2102.22 1991.5500000000002 1580.3700000000001 1248.66 1908.36 2085.19 1755.39 True False 2353.5516420062672 2371.945222274565 1994.8878872465511 1845.0029165263647 1792.986222793995 2202.294499116103 1867.5027723593748 1425.6613788608727 1476.11950702471 1614.1441307726502 1319.4782167006297 1.7836987471391152 1.7976387880094307 1.5118763326269917 1.3982822097206087 1.3588600403554805 1.6690646887850604 1.4153342955741148 1.0804735999551058 1.1187145709125563 1.2233200293437476 1.0 10.36575181803382 -6.137510549103798 0.22390340740558656 0.9289849537415006 2.2539024533063454 0.697028041560821 0.14510424134920138 2.475934652596841 0.14452402894151017 0.1236196146808147 0.9066333557598991 7.286004764403247e-07 6.137510549103798 1.3249174995648447 RLS(ph)QRPTTEELEQR ddPTM_A549_PD325901_60min_R1 4 RLSQRPTTEELEQR 14 2 J3KP75;O75167-5;O75167-2;O75167;O75167-4 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 RLS(0.999)QRPT(0.001)TEELEQR;RLS(0.999)QRPT(0.001)TEELEQR;RLS(0.989)QRPT(0.004)T(0.007)EELEQR;RLS(0.944)QRPT(0.054)T(0.002)EELEQR 161.61 6.2558e-20 152668000.0 25247.7 26037.420000000002 28458.0 26660.2 30922.0 23767.8 27683.899999999998 29204.9 25673.5 28861.7 27456.4 True False 27810.82791762562 28231.68476173343 30389.331011855822 28306.940004292745 28750.14539510885 23574.242916988973 28737.425963711343 28622.385358699164 24594.532077001204 27039.36733643147 24079.4368604598 1.1549617243455157 1.1724395767781401 1.2620449218958825 1.1755648675810528 1.1939708375123463 0.9790196944223231 1.193442609569508 1.1886650640779404 1.0213914976303797 1.1229235755439155 1.0 14.555514032107112 -8.504776716337929 0.5300247097194651 0.9936429101400694 1.192226902906474 0.19201219949253423 0.0789827315493977 0.44052302235813867 0.27928180230388105 0.023571288206381744 0.027720333548374436 3.127686990385898e-09 8.504776716337929 0.1985839927664046 RLS(ph)QSDEDVIR ddPTM_A549_MK2206_60min_R1 5 RLSQSDEDVIR 11 1 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 RLS(1)QSDEDVIR;RLS(0.995)QS(0.005)DEDVIR;RLS(0.995)QS(0.005)DEDVIR;RLS(1)QSDEDVIR;RLS(0.999)QS(0.001)DEDVIR 178.84 3.7602000000000004e-16 142268000.0 2324.98 3122.6200000000003 2729.79 2263.0299999999997 3724.15 2145.0699999999997 1906.52 2748.35 3201.32 3466.66 4109.37 True False 2717.3797836964623 3281.548020211601 3116.9152695445982 2817.4724515912767 3176.332468351673 2372.059883617774 2252.9100056053926 3137.937028968876 2476.2261314575576 2683.5390983000652 3088.9000161577037 0.8797240990262362 1.0623678341954017 1.0090696536761792 0.9121280834126652 1.0283053681688044 0.7679302894913348 0.729356726932132 1.0158752347290831 0.8016530540013225 0.868768520917725 1.0 11.592877458143676 -7.221319164938546 24.99743228368045 0.8898848102785262 0.9810194790014498 0.23742367450647794 0.09606767504384978 822.953387765828 512752.26201259875 0.015910080996981615 0.027556767784575265 6.007320945431347e-08 7.221319164938546 0.09113466872292364 RLS(ph)QSDEDVIR ddPTM_A549_PD325901_60min_R1 7 RLSQSDEDVIR 11 1 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 RLS(0.835)QS(0.165)DEDVIR;RLS(0.999)QS(0.001)DEDVIR;RLS(1)QSDEDVIR;RLS(0.814)QS(0.186)DEDVIR;RLS(1)QSDEDVIR;RLS(1)QSDEDVIR;RLS(1)QSDEDVIR 198.29 9.2755e-53 139828200.0 11703.16 11643.77 11723.980000000001 13522.16 14099.539999999999 12219.64 12974.33 11705.33 12560.060000000001 12431.506000000001 14940.26 True False 12891.25618778897 12625.031361714362 12519.639784818952 14357.393112146468 13109.236951172394 12120.127303248726 13468.075227975796 11471.858010496264 12032.204356985205 11646.578589585919 13102.702734111288 0.9838623717096288 0.9635440578871284 0.9555005588446723 1.0957581350577958 1.000498692307511 0.9250097135834009 1.0278852768988878 0.8755337156990276 0.9182994227336646 0.8888684133286083 1.0 13.67757681107702 -7.223891427849702 21.08068490678879 0.956626980124199 1.0006831037762494 0.19726473585655024 0.05505201061710516 148.22320516428024 83216.3199651655 0.008105520260498962 0.014038360632089245 5.97184562042795e-08 7.223891427849702 0.04405612365205036 RLS(ph)S(ph)ASTGKPPLSVEDDFEK ddPTM_A549_PD325901_60min_R1 1 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 2 RLS(0.883)S(0.391)AS(0.347)T(0.374)GKPPLS(0.004)VEDDFEK 67.61399999999999 0.00041975 4523500.0 2018.8 2265.7 2094.7 2101.3 2611.9 2177.4 2216.1 2172.7 2916.9 2962.7 3764.8 True False 2223.747089837989 2456.6384904748406 2236.858938454369 2231.092528601448 2428.4491545658366 2159.667976314668 2300.4348981964513 2129.3637940498224 2794.312836792987 2775.634616382456 3301.753467033515 0.67350488521965 0.7440405575410892 0.6774760625795879 0.6757295936470962 0.7355028710692003 0.6540972843302677 0.6967312735990838 0.6449190756701061 0.846311774847187 0.8406547139560501 1.0 11.68901668681321 -9.277831153931649 0.9633121916566983 0.9672581694853565 0.687208888530858 0.7030274005119359 0.05682473457590788 0.10900911811895789 0.2134919590068862 0.01221070289875865 0.009824940655064783 5.274348789858175e-10 9.277831153931649 -0.28004928095449844 RLS(ph)S(ph)LRAS(ph)TSK ddPTM_A549_PD325901_60min_R1 1 RLSSLRASTSK 11 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 3 RLS(1)S(1)LRAS(0.728)T(0.21)S(0.063)K 52.111999999999995 0.006872 251760000.0 4676.0 5841.9 6437.8 5444.6 5537.5 4537.2 4184.3 5730.9 6124.5 6694.3 7113.0 True False 5150.704077710735 6334.217415149834 6874.7078216362925 5780.900576416241 5148.565103337922 4500.250547503863 4343.535826236817 5616.592703695926 5867.108563522454 6271.620755543613 6238.146093022048 0.8256786553095127 1.0154006207445592 1.1020434146815348 0.9267016979423937 0.8253357690832337 0.7214083287561693 0.6962863263326695 0.9003624826899472 0.9405211862680428 1.005366123528112 1.0 12.60690162467944 -5.217916593262926 20.868502114972795 0.9322521013093624 0.8256756940110406 0.021083078063105165 0.11998499529958877 7633.039697798905 3659232.48364927 0.018028438061531264 6.654538043148817 6.054571423047997e-06 5.217916593262926 -0.10657640729832185 RLS(ph)S(ph)LRAS(ph)TSKSESSQK ddPTM_A549_MK2206_60min_R1 1 RLSSLRASTSKSESSQK 17 3 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 3 RLS(0.996)S(0.992)LRAS(0.481)T(0.331)S(0.119)KS(0.041)ES(0.018)S(0.02)QK 42.254 0.024844 141070000.0 3367.6 4960.1 5444.5 5191.7 10016.0 6999.8 6150.9 5887.7 10328.0 9844.2 11330.0 True False 3935.9685500848213 5212.547903699962 6216.611968332934 6463.666733064265 8542.659668114968 7740.514189908814 7268.438911460785 6722.299505325031 7988.7244904269655 7620.388382906173 8516.448307907727 0.46216079846691255 0.6120565422630448 0.7299535843551895 0.7589627153684001 1.0030777337288483 0.9088899398029059 0.8534589360111379 0.7893313341763859 0.9380347536436336 0.8947847867321005 1.0 13.056036180268624 -5.004569762489843 0.46936785354376176 0.9606857963500077 7.645116310301245e-18 0.7971674115465931 0.07160870041542954 1.622185379447309 0.19939917702775933 0.01519991801004455 0.9068781308804026 9.895328984057692e-06 5.004569762489843 -0.9606857963500077 down RLS(ph)S(ph)LRAS(ph)TSKSESSQK ddPTM_A549_PD325901_60min_R1 2 RLSSLRASTSKSESSQK 17 3 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 3 RLS(0.991)S(0.96)LRAS(0.688)T(0.156)S(0.14)KS(0.042)ES(0.011)S(0.011)QK;RLS(1)S(0.995)LRAS(0.769)T(0.197)S(0.032)KS(0.005)ES(0.001)SQK 73.389 0.00023117 420023000.0 19972.3 23011.0 24855.0 24044.0 23578.0 24648.0 22975.0 28502.0 31319.0 31548.0 31288.0 True False 21999.87319316983 24950.21772711151 26541.809765256752 25529.143272114026 21921.962619684236 24447.274860018348 23849.32619740239 27933.505250613547 30002.771344756293 29556.053895984638 27439.77435097341 0.8017512429867849 0.9092719716999573 0.9672750739772463 0.9303700149126188 0.7989119130240431 0.8909429992871314 0.86915168806978 1.0179932565525132 1.0934044486299488 1.0771245243471237 1.0 14.74398099720922 -8.325892275967137 4.70017139800232 1.0444186682974057 0.8845095567511843 0.7034243660469115 0.051981649275243035 0.1043754275316126 4.645943787284133 0.00946865949276486 0.01156407710156659 4.721801480748397e-09 8.325892275967137 -0.15990911154622145 RLS(ph)S(ph)LRASTSK ddPTM_A549_MK2206_60min_R1 1 RLSSLRASTSK 11 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.999)S(0.999)LRAS(0.001)TSK 48.111999999999995 0.025558 27673000.0 4454.7 5262.1 6125.4 4872.1 4450.6 2766.4 2554.8 1756.8 3625.1 6781.0 6908.1 True False 5206.544453041587 5529.918413753669 6994.073826949502 6065.764718716878 3795.922635674171 3059.1386118123005 3018.974090133153 2005.8317799743581 2804.020638095157 5249.167390390968 5192.628116139221 1.0026800180161397 1.0649556043819342 1.3469236907629112 1.168149265275489 0.7310214694320308 0.5891310803298592 0.5813961683005705 0.3862845047077466 0.5400002802781069 1.0108883734762397 1.0 12.342249191348483 -6.768470215882017 9.033636781718497 0.7140850327511249 1.1546025697775986 0.5603333379434262 0.19291173609966963 0.09228070339985087 72.43762682393599 0.03336388331961283 0.06535628369165923 1.704236192620272e-07 6.768470215882017 0.44051753702647367 RLS(ph)SAS(ph)TGKPPLSVEDDFEK ddPTM_A549_MK2206_60min_R1 1 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 2 RLS(0.503)S(0.503)AS(0.82)T(0.171)GKPPLS(0.003)VEDDFEK 75.55 0.00011278 2191100.0 682.26 633.7 872.22 460.96 1243.4 754.64 614.48 722.84 1052.9 975.62 1033.9 True False 797.4088083444799 665.9526232484558 995.9139114738464 573.8952206932811 1060.4975071220201 834.4955039105098 726.1230620420464 825.3047836046585 814.4198311358008 755.2267644024828 777.1540958116327 1.0260626723091433 0.8569119391347453 1.2814883391095668 0.7384574356439888 1.3645910287772123 1.0737838331006822 0.9343360164417698 1.0619577096132253 1.0479515395016339 0.9717850918790439 1.0 9.602056877495777 RLS(ph)SAS(ph)TGKPPLSVEDDFEK ddPTM_A549_PD325901_60min_R1 2 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 2 RLS(0.948)S(0.079)AS(0.822)T(0.151)GKPPLSVEDDFEK;RLS(0.499)S(0.499)AS(0.499)T(0.499)GKPPLS(0.003)VEDDFEK 97.346 3.6249e-07 8015100.0 3706.0 4096.9 4432.8 4478.8 4610.299999999999 3828.5 3839.7 4474.700000000001 4859.7 6277.7 5946.7 True False 4082.2303917869963 4442.160141071798 4733.636464591838 4755.445303907182 4286.488432671568 3797.3219653351293 3985.821884664459 4385.44859816576 4655.463709061976 5881.324950641017 5215.293599237198 0.7827422012030298 0.8517564843753992 0.9076452503621641 0.9118269591960702 0.8219074058071287 0.728112788490093 0.7642564716294085 0.8408823999491011 0.8926561123505868 1.1277073550569108 1.0 12.34853275739573 -9.58189618234575 0.878652910894893 0.9825697306819168 0.8283870709363544 0.58283702284906 0.06996920146883635 0.29562222629683155 0.48269313665435826 0.019961669985409443 0.013009560375075823 2.6188089570178136e-10 9.58189618234575 -0.15418265974556233 RLS(ph)SASTGKPPLSVEDDFEK ddPTM_A549_MK2206_60min_R1 3 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 RLS(0.984)S(0.016)ASTGKPPLSVEDDFEK;RLS(0.965)S(0.035)ASTGKPPLSVEDDFEK;RLS(0.838)S(0.161)AS(0.001)T(0.001)GKPPLSVEDDFEK 228.46 7.080599999999999e-76 136690000.0 9180.3 11242.1 7849.5 7452.499999999999 10645.0 6999.5 8355.6 7306.1 11049.2 9273.8 11285.900000000001 True False 10729.710203214066 11814.274871108515 8962.677132046914 9278.362834555435 9079.134601346232 7740.182444107933 9873.704363361743 8341.76204899286 8546.573841946712 7178.842139066181 8483.299555005806 1.2648038812778577 1.392650913068038 1.056508387324156 1.093720995515298 1.0702362379728578 0.912402349335952 1.1638990583016122 0.9833157481832139 1.0074586882769654 0.846232305309802 1.0 13.050409790698305 -5.824540611235551 5.800984610810473 1.0189338905951146 1.3280985685324957 0.6656653748399718 0.08590638546063457 0.05859469122161571 3.7486069778333873 0.008797950270060896 0.028690271269799755 1.4978191841875077e-06 5.824540611235551 0.3091646779373811 RLS(ph)SASTGKPPLSVEDDFEK ddPTM_A549_PD325901_60min_R1 4 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 RLS(0.907)S(0.093)ASTGKPPLSVEDDFEK;RLS(0.957)S(0.027)AS(0.014)T(0.003)GKPPLSVEDDFEK;RLS(0.951)S(0.049)ASTGKPPLSVEDDFEK;RLS(0.964)S(0.035)ASTGKPPLSVEDDFEK 223.09 1.3210999999999995e-75 136257000.0 12572.9 15033.9 15036.5 15068.900000000001 16720.8 14165.3 14366.0 15134.5 17123.2 20718.1 22966.5 True False 13849.291552320214 16300.859514476642 16056.967311819897 15999.671729045045 15546.388691628483 14049.942493290244 14912.705991376839 14832.630524714432 16403.571451531996 19409.955630226934 20141.76609663867 0.687590724957899 0.8093063655027247 0.797197586089511 0.7943529704535258 0.7718483382757046 0.6975526587827345 0.740387209335408 0.7364116162181903 0.8144058158966251 0.9636670159458429 1.0 14.29790256871109 -10.068998305990787 0.6640963342437319 0.9975985666147515 0.7565025485946416 0.8164152197657999 0.04057140136582467 0.21611085386767126 0.18646535191640837 0.02562028281133772 0.009479263692351738 8.531034416266921e-11 10.068998305990787 -0.24109601802010994 RLS(ph)SDCSVTQER ddPTM_A549_MK2206_60min_R1 2 RLSSDCSVTQER 12 1 E7EX48;P51957-3;P51957;P51957-2 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 RLS(0.934)S(0.066)DCSVTQER;RLS(0.963)S(0.037)DCSVTQER 69.485 0.0015057 18425400.0 1786.8500000000001 1538.21 1838.04 1557.52 1957.84 1507.3400000000001 1322.3600000000001 1733.42 2221.65 2686.2 2349.5 True False 2088.4265957118014 1616.4983187738794 2098.7017104003444 1939.1124699197308 1669.8443295349653 1666.8457183086869 1562.6156950949112 1979.1375933761092 1718.4498222460368 2079.385554353077 1766.054307098783 1.1825381514697593 0.9153163140432587 1.1883562707921613 1.0979914163031839 0.9455226392659077 0.9438247236275125 0.8848061403400022 1.1206550021824484 0.9730447219763307 1.177418806429019 1.0 10.786313991961862 -6.751366252728937 24.925302042471312 0.9836253148522571 1.0897342435503254 0.12311687079728939 0.10372294185358963 201.35357607343536 498232.4248620813 0.011266499846702142 0.023239840927449056 1.7726938878189297e-07 6.751366252728937 0.10610892869806832 RLS(ph)SFVTK ddPTM_A549_PD325901_60min_R1 1 RLSSFVTK 8 1 P27708;F8VPD4;H7C3Z5 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 RLS(0.912)S(0.088)FVTK 110.84 0.00065386 8741700.0 1415.5 1718.1 1333.0 1724.6 2036.5 1919.0 1808.8 1739.7 1786.0 1796.3 1788.0 True False 1559.2005179639755 1862.890316672475 1423.4653959801753 1831.12462514922 1893.4632655435983 1903.3723002424229 1877.6348738133386 1705.0003187317518 1710.940630982302 1682.8813114415243 1568.0873350658542 0.994332702711673 1.1880016342292823 0.9077717574451265 1.1677440307062483 1.207498602406657 1.2138177878737142 1.197404527047267 1.0873120907262144 1.0911003441721239 1.0732063666408282 1.0 10.614790197659593 -9.866031928823425 0.8141287585473521 1.0098084557894866 1.1237470895209956 0.09129841833141827 0.09328248622506305 0.680259384509289 0.9311577156912872 0.03706386960726667 0.019001409339867385 1.3613445943211256e-10 9.866031928823425 0.11393863373150892 RLS(ph)SGKADGHVK ddPTM_A549_MK2206_60min_R1 1 RLSSGKADGHVK 12 2 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;A0A1W2PRD7 E7EPJ7 TRIO Triple functional domain protein 1 RLS(0.513)S(0.487)GKADGHVK 46.964 0.0074845 3811000.0 1894.7 2586.5 1961.4 2423.6 1963.0 1568.0 1166.1 1469.1 3113.7 3269.2 3644.3 True False 2214.4790390324592 2718.141802165267 2239.5560133507615 3017.382108799538 1674.245300370376 1733.924719245837 1377.9652757571132 1677.3494239300599 2408.4519215571677 2530.6854494419936 2739.319732436727 0.8084047337776805 0.9922689089482003 0.8175591869878559 1.1015078207447746 0.6111901727079783 0.632976391442793 0.5030319241088961 0.6123233458541895 0.8792153369459942 0.9238371919406628 1.0 11.419601951391694 -6.736725674594707 24.999613793117383 0.8394762937758461 0.9263605190214166 0.05693897201181575 0.17959190839605116 784.012230096332 793078.3495110354 0.031035254551969583 0.06458303832062279 1.8334721832970173e-07 6.736725674594707 0.08688422524557049 RLS(ph)SGKADGHVK ddPTM_A549_PD325901_60min_R1 1 RLSSGKADGHVK 12 2 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;A0A1W2PRD7 E7EPJ7 TRIO Triple functional domain protein 1 RLS(0.94)S(0.06)GKADGHVK 61.165 0.0017055999999999998 11393000.0 2769.8 3512.5 2966.8 4164.3 3471.7 4446.4 3226.1 3952.6 4889.3 3243.6 3692.4 True False 3050.988056981009 3808.51070211982 3168.144888817695 4421.519353188511 3227.8597687148113 4410.189992599221 3348.8710008896564 3873.762292245287 4683.819723998752 3038.79854244376 3238.2582080521033 0.9421694815424424 1.1760985250187133 0.9783484469953422 1.3654004928310426 0.9967888788758612 1.3619018957886206 1.0341581139399287 1.1962487372418198 1.4464009424425088 0.9384052620904733 1.0 11.661002310643614 -4.048778590977765 0.6422526703588164 1.2052293526798652 2.2028527683600266e-13 0.05135100364043366 0.1748816528556936 20.05273423925497 1.7603342810860165 0.030700065112344917 25.50303446475738 8.937610186927394e-05 4.048778590977765 -1.205229352679645 RLS(ph)SGQNK ddPTM_A549_PD325901_60min_R1 1 RLSSGQNK 8 1 P49454 P49454 CENPF Centromere protein F 1 RLS(0.999)S(0.001)GQNK 125.17 0.00046115 17663000.0 5029.2 4528.4 3733.6 3768.7 4637.1 3852.6 3316.8 3743.5 3876.4 4844.8 5584.8 True False 5539.760681698636 4910.024160421181 3986.984547960676 4001.4840396612944 4311.40609312655 3821.2257029254606 3443.0226390226035 3668.8329557810634 3713.48838854412 4538.898501181258 4897.90500496408 1.1310469835744117 1.0024743549425352 0.8140183494616217 0.8169786950963212 0.8802551476104361 0.7801755442485321 0.7029582312300999 0.7490616808743047 0.7581789325804521 0.9267020280264797 1.0 12.257949077715416 -5.546254486003492 3.1172688076534603 0.8468413482469411 1.1206240149170086 0.5623225295450669 0.0834343691687264 0.1991871646362303 3.7003567313084513 0.015488794236393698 0.0955110580332597 2.8427948106742587e-06 5.546254486003492 0.27378266667006745 RLS(ph)SLR ddPTM_A549_MK2206_60min_R1 1 RLSSLR 6 1 P62753;A2A3R5;Q9Y253-2;Q9Y253 P62753 RPS6;POLH 40S ribosomal protein S6;DNA polymerase eta 1 RLS(0.994)S(0.006)LR 63.419 0.048182 231770000.0 7283.1 6361.6 4570.9 3515.2 4114.2 3772.5 3706.8 3875.2 3752.4 4413.2 4167.1 True False 8512.309225300733 6685.378267409457 5219.122352108186 4376.424157803325 3509.006630047786 4171.703446017172 4380.277578403622 4424.521467302268 2902.4873913514843 3416.2550548994877 3132.2940638907594 2.7175958105054865 2.134339283300003 1.6662300044796194 1.3971945381038642 1.120267305199658 1.33183646264531 1.3984247612316092 1.4125498363350908 0.9266331104769192 1.0906559171063295 1.0 11.6130039457591 -2.0000000000000906 0.37187885995469555 0.9909563164117987 24.960511394323227 0.9029924515399944 0.15857705787359952 11.476983116003087 0.13827844534503428 0.042490648146774064 199.6484933518434 0.009999999999997913 2.0000000000000906 23.96955507791143 up RLS(ph)SLR ddPTM_A549_PD325901_60min_R1 1 RLSSLR 6 1 P62753;A2A3R5;Q9Y253-2;Q9Y253 P62753 RPS6;POLH 40S ribosomal protein S6;DNA polymerase eta 1 RLS(0.898)S(0.102)LR 78.377 0.035419 311120000.0 6828.9 5866.0 4248.3 4901.2 6085.9 6868.6 4374.4 5021.4 4365.0 5243.9 4988.2 True False 7522.164900829519 6360.34840672879 4536.615185103214 5203.935992567182 5658.447379215213 6812.664398877068 4540.870185763528 4921.244237787903 4181.554229696389 4912.799259070424 4374.683022805085 1.7194765567280441 1.4538992593457616 1.0370157475305026 1.1895572697357106 1.2934531141383057 1.5572932629319343 1.0379883895797968 1.1249373296610548 0.9558530773311067 1.1230069089486385 1.0 12.094962771779816 -2.0000000000000178 0.21273373703772885 0.9445979132167465 4.260356155372218 0.4520577485847457 0.17673152911027323 27.343284648701125 0.31288047710597766 0.12307999033410577 31.224358232806388 0.00999999999999959 2.0000000000000178 3.3157582421554714 RLS(ph)SLRAS(ph)TSKSESSQK ddPTM_A549_PD325901_60min_R1 2 RLSSLRASTSKSESSQK 17 3 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.526)S(0.474)LRAS(0.499)T(0.404)S(0.091)KS(0.005)ES(0.001)SQK;RLS(0.527)S(0.474)LRAS(0.737)T(0.059)S(0.093)KS(0.065)ES(0.037)S(0.009)QK 103.35 4.7978e-09 635620000.0 17396.8 18578.4 18781.4 20915.1 19995.5 23971.0 20623.0 23772.0 23214.0 19441.2 21379.0 True False 19162.910329152717 20144.06696890048 20056.018745733 22206.978225361505 18591.08506073018 23775.788123559716 21407.81955033861 23297.84881122676 22238.39630885955 18213.679314144043 18749.51853264703 1.022048128637857 1.0743778264932635 1.069681800671898 1.1844025854154216 0.991549997849759 1.2680745952041832 1.1417796949325867 1.2425838439883181 1.1860782595637116 0.971421174492029 1.0 14.194565928785657 -5.542621851989346 1.4499097964053715 1.115684545094364 1.0135817770948699 0.09004072015653952 0.09563357089294158 1.6267709454283108 4.4276402674512045 0.014444406758347851 0.20501876170930278 2.8666729471939293e-06 5.542621851989346 -0.10210276799949414 RLS(ph)SLRASTS(ph)K ddPTM_A549_PD325901_60min_R1 1 RLSSLRASTSK 11 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.557)S(0.447)LRAS(0.306)T(0.159)S(0.53)K 55.782 0.013559 541140000.0 8285.3 8014.7 9098.7 9070.5 9417.8 7100.3 8001.1 8261.3 8732.5 7096.6 7791.2 True False 9126.417556684513 8690.1268965921 9716.192496927852 9630.764184399872 8756.326217646203 7042.477510896965 8305.586238869917 8096.5218906355285 8365.503393086761 6648.519464886668 6832.93179248606 1.335651786648964 1.2718006209499024 1.421965386455696 1.4094629475140512 1.2814888957731487 1.0306670291427957 1.2155230713708112 1.1849264907837944 1.2242919506800898 0.9730112441921075 1.0 12.738289010313618 -14.9999999999981 0.06414128343824042 0.010082523877035962 1.6625193159773466 0.6622700251211977 0.08630169964166452 120.48789964560447 0.5819096769344976 18.383067361439036 2.9087052095868473 1.0000000000043765e-15 14.9999999999981 1.6524367921003107 RLS(ph)SQDVLR ddPTM_A549_PD325901_60min_R1 2 RLSSQDVLR 9 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 RLS(0.998)S(0.002)QDVLR;RLS(0.999)S(0.001)QDVLR 167.2 2.1691999999999996e-07 22596400.0 1167.22 1236.28 1142.21 1300.82 1190.43 1127.76 1276.21 1240.49 1038.72 1287.1100000000001 1280.71 True False 1285.7153151380512 1340.465654325038 1219.7272392667037 1381.168697023432 1106.8183035605525 1118.5758964676365 1324.7768699189076 1215.7474538044203 995.0662106461011 1205.8416549404335 1123.1907890895918 1.1446989484130248 1.1934443082564445 1.085948399074177 1.2296830693767935 0.98542323736263 0.9958912656097404 1.1794762588755847 1.0824051137294766 0.8859280367253165 1.073585776035285 1.0 10.133387294408246 -7.7794096975051605 0.6347090703860047 0.9495175374647982 1.15467137786818 0.18293671799426336 0.09017399035620799 0.5058262402645767 0.41474371370755986 0.020908678644240872 0.0406621961929585 1.6618441877413232e-08 7.7794096975051605 0.20515384040338192 RLS(ph)SSESPQR ddPTM_A549_MK2206_60min_R1 1 RLSSSESPQR 10 1 J3KS33;Q9H2G4 J3KS33 TSPYL2 Testis-specific Y-encoded-like protein 2 1 RLS(0.965)S(0.031)S(0.004)ESPQR 62.891000000000005 0.0028478 6382200.0 695.83 755.85 679.34 519.38 684.87 537.72 306.77 426.52 984.37 766.33 879.48 True False 813.2690925898323 794.3195365036223 775.6806271590226 646.6281233158542 584.1265302418032 594.6211734903521 362.5061381048017 486.9805161627176 761.4117667158783 593.2155207607002 661.0808435868212 1.2302112524956623 1.2015467460740339 1.1733521469937296 0.9781377415316544 0.8835931881984546 0.8994681652914349 0.5483537174333399 0.7366429096939358 1.1517680085610897 0.8973418705374904 1.0 9.368682899495589 -6.209247399763492 4.114895689414993 0.9807844538618258 1.208616901068149 0.328169501401956 0.16514782160361147 0.28940690363891286 10.32726020860989 0.02813964507631522 0.07727709945746712 6.176644417869798e-07 6.209247399763492 0.22783244720632312 RLS(ph)SSLNPSK ddPTM_A549_MK2206_60min_R1 2 RLSSSLNPSK 10 1 A0A590UJ01;Q13535-2;Q13535-3;Q13535 A0A590UJ01 ATR Serine/threonine-protein kinase ATR 1 RLS(0.877)S(0.112)S(0.011)LNPSK;RLS(0.924)S(0.073)S(0.003)LNPSK 95.18299999999999 0.00023531 15565400.0 3061.2 3139.8999999999996 3106.4 2710.55 3424.9 2796.1 2586.0 3164.2 3781.0 4255.9 4328.0 True False 3577.8557208456014 3299.707498402753 3546.934230586728 3374.6348716812136 2921.1017469375943 3091.9814460990347 3055.842726273814 3612.735039956091 2924.6095370163016 3294.48923414908 3253.238153276668 1.0997829092966889 1.01428402807808 1.0902780747896519 1.037315656796375 0.8979059046124412 0.950431939015834 0.9393234009615814 1.110504325149801 0.8989841503213126 1.0126800064824224 1.0 11.667660723387561 -6.590814991226093 7.267660980266626 0.9592560019738421 1.0629371209839678 0.32170597367631626 0.06011217505283634 0.17846403776389816 15.962754637664409 0.008718484479006658 0.018240951633324304 2.56557673545667e-07 6.590814991226093 0.10368111901012567 RLS(ph)SSLNPSK ddPTM_A549_PD325901_60min_R1 4 RLSSSLNPSK 10 1 A0A590UJ01;Q13535-2;Q13535-3;Q13535 A0A590UJ01 ATR Serine/threonine-protein kinase ATR 1 RLS(0.703)S(0.234)S(0.062)LNPSK;RLS(0.99)S(0.01)SLNPSK;RLS(0.955)S(0.042)S(0.003)LNPSK;RLS(0.954)S(0.016)S(0.03)LNPSK 136.01 4.66e-07 35205700.0 9680.199999999999 9763.1 10301.9 9816.599999999999 12270.8 10914.9 11094.0 11500.099999999999 13180.800000000001 13643.2 12747.1 True False 10662.9267778134 10585.870700602436 11001.04888435722 10422.94908688382 11408.94133996188 10826.01267322356 11516.188240869737 11270.721483846075 12626.8568134667 12781.766023636914 11179.287510524571 0.9538109443714502 0.9469181905051219 0.9840563518918759 0.9323446666052101 1.0205427965978249 0.9683991634557725 1.0301361540284204 1.0081788730485217 1.129486722796899 1.1433435280740132 1.0 13.448540623384584 -7.880508109867617 1.3674697467223442 1.0595624657444083 0.9638263331622821 0.5360526528628159 0.04510832726742767 0.3015464719956675 1.1406114509745586 0.0088034992710194 0.013386819760454985 1.3167153245973864e-08 7.880508109867617 -0.09573613258212621 RLS(ph)SSLNPSKR ddPTM_A549_PD325901_60min_R1 1 RLSSSLNPSKR 11 2 A0A590UJ01;Q13535-2;Q13535-3;Q13535 A0A590UJ01 ATR Serine/threonine-protein kinase ATR 1 RLS(0.842)S(0.137)S(0.02)LNPSKR 41.092 0.030488 12357000.0 1978.6 1931.8 1831.0 2419.4 2314.2 2332.9 2394.0 2267.3 2482.1 2526.5 3054.2 True False 2179.466015431664 2094.5995656526898 1955.2626706974502 2568.840843143934 2151.6585755565907 2313.9016358705308 2485.104980047068 2222.0769228375584 2377.7859687352593 2366.9763588248115 2678.5527621689766 0.813672982744169 0.7819892873629912 0.7299698174002601 0.9590405981265037 0.8032914661775302 0.8638626308024759 0.9277789913814267 0.8295811657031599 0.8877129479464988 0.8836773321232381 1.0 11.3872379992262 -14.999999999924054 0.06309786598196718 1.6016507091736099 0.6032979483657014 0.2906496319690888 0.06453765704796288 117.46059680584875 0.5586618367044573 10.692681963816716 1.7412538070604846 1.000000000174873e-15 14.999999999924054 -0.9983527608079085 RLS(ph)SSS(ph)ATLLNSPDR ddPTM_A549_PD325901_60min_R1 2 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 2 RLS(0.782)S(0.246)S(0.259)S(0.333)AT(0.272)LLNS(0.108)PDR;RLS(0.693)S(0.236)S(0.271)S(0.465)AT(0.2)LLNS(0.135)PDR 64.59 0.0010045 23480000.0 2464.0 2864.5 2607.2 3019.5 3101.4 2835.4 2467.8 2865.6 2738.8 3131.8 3427.8 True False 2714.143466099072 3105.9014679636243 2784.1402703672256 3206.0076572179464 2883.5683632491614 2812.309442473875 2561.7134794319772 2808.4433599802874 2623.6977604335557 2934.0576135236674 3006.202330614505 0.9028479016394972 1.0331644800929747 0.9261320311058746 1.0664643642141673 0.9592063494474519 0.9355023824690483 0.8521427361505408 0.9342163471100119 0.8727615349487269 0.9760013767682462 1.0 11.553726396894017 -7.082007637651337 4.774483091336793 0.9307181759722508 0.9850106502457122 0.16038999625539108 0.05697493377167825 0.3503141204064827 14.141083502612606 0.009295384229150716 0.016511755139054906 8.279276033662244e-08 7.082007637651337 0.0542924742734614 RLS(ph)SSSATLLNS(ph)PDRAR ddPTM_A549_MK2206_60min_R1 1 RLSSSSATLLNSPDRAR 17 2 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 2 RLS(0.803)S(0.051)S(0.057)S(0.064)AT(0.025)LLNS(0.999)PDRAR 65.21300000000001 0.0020669 11581000.0 1998.6 2507.2 1860.7 1902.5 2925.4 2062.3 2453.5 1827.3 3339.0 3102.1 3431.1 True False 2335.914818921345 2634.805770882954 2124.5752391362103 2368.61258540647 2495.077535253947 2280.5312171560536 2899.2691913815925 2086.3253708715506 2582.72183128734 2401.3334554979815 2579.063176457386 0.9057222173711811 1.0216135048316795 0.8237778967689102 0.9184003738365215 0.9674356014346257 0.8842479075245464 1.1241559407490138 0.8089469811814914 1.0014185983745383 0.9310874884408474 1.0 11.332631398326411 -8.361011116318712 0.49720391352347826 1.005076506103593 0.9213702465911524 0.0 0.08773337888578037 1.2985913523316255 0.7320974179195349 0.02729052978945291 0.03582187797517648 4.3550072634883344e-09 8.361011116318712 -0.08370625951244048 RLS(ph)SSSATLLNS(ph)PDRAR ddPTM_A549_PD325901_60min_R1 2 RLSSSSATLLNSPDRAR 17 2 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 2 RLS(0.311)S(0.13)S(0.15)S(0.174)AT(0.236)LLNS(0.999)PDRAR;RLS(0.461)S(0.06)S(0.102)S(0.122)AT(0.255)LLNS(1)PDRAR 75.956 0.00037759 28863000.0 4921.3 5607.9 5759.200000000001 5782.4 6611.0 5954.1 5487.299999999999 6170.9 5999.9 7309.7 6617.3 True False 5420.9067531304245 6080.49741392676 6150.05394488299 6139.5657152167805 6146.666166711872 5905.611783675561 5696.122204265776 6047.816558522602 5747.745068214286 6848.164294518792 5803.414050520846 0.9340892629647729 1.047744889644923 1.059730339993755 1.057923088335523 1.059146583925064 1.0176099330954238 0.9815122882287814 1.0421135741606824 0.9904075460027596 1.1800233853561046 1.0 12.50268614778106 -8.772214610384887 24.996315657500567 0.9954702276608158 1.02744256712164 0.0 0.06649077809622159 307.9181883942985 714305.4012177067 0.006219585165750903 0.006653263408726554 1.6896057919583786e-09 8.772214610384887 0.03197233946082423 RLS(ph)SSSATLLNSPDR ddPTM_A549_MK2206_60min_R1 4 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLS(0.723)S(0.153)S(0.05)S(0.064)AT(0.009)LLNSPDR;RLS(0.923)S(0.061)S(0.005)S(0.005)AT(0.005)LLNS(0.001)PDR;RLS(0.934)S(0.035)S(0.013)S(0.017)AT(0.001)LLNSPDR;RLS(0.954)S(0.031)S(0.009)S(0.003)AT(0.004)LLNSPDR 99.059 4.4242e-06 38764500.0 5028.200000000001 5773.8 4159.41 4000.59 6608.200000000001 5246.98 4374.12 4853.13 7078.6 6808.5 7723.299999999999 True False 5876.837232312775 6067.66175810625 4749.276882579429 4980.734729593307 5636.142533829607 5802.211940936562 5168.840984473629 5541.076039587293 5475.308402201423 5270.455121291388 5805.391457763791 1.012306797064208 1.045177022471364 0.8180803856435942 0.8579498498645365 0.9708462512535928 0.9994523165491319 0.8903518431235371 0.9544706984706401 0.9431419813868134 0.9078552513875684 1.0 12.503177636013637 -10.549132746183865 0.6630708555203976 1.0040860548105373 0.9407423359717064 0.0 0.06949471280136985 1.7646212340679024 1.2619230780666193 0.06206186565664694 0.013722572644416115 2.82401665578988e-11 10.549132746183865 -0.06334371883883083 RLS(ph)SSSATLLNSPDR ddPTM_A549_PD325901_60min_R1 5 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLS(0.904)S(0.034)S(0.048)S(0.012)AT(0.002)LLNSPDR;RLS(0.995)S(0.004)S(0.001)SATLLNSPDR;RLS(0.467)S(0.301)S(0.197)S(0.035)ATLLNSPDR;RLS(0.955)S(0.04)S(0.001)S(0.001)AT(0.003)LLNSPDR;RLS(0.946)S(0.051)S(0.003)S(0.001)ATLLNSPDR 145.61 5.3198000000000003e-14 94663400.0 10999.7 11974.4 11551.7 11251.329999999998 12639.8 11909.2 10147.099999999999 12190.3 13103.399999999998 12603.199999999999 14392.4 True False 12116.381446448846 12983.524712160459 12335.667828015146 11946.299100475575 11752.024052942781 11812.215423682677 10533.253443206175 11947.154903394643 12552.709666300949 11807.431801124436 12622.226040940599 0.9599242960115728 1.0286240057853484 0.9772973315486514 0.9464494663403561 0.9310579619493986 0.9358266430476981 0.8345004604608748 0.9465172676074457 0.9944925424077994 0.9354476589808048 1.0 13.623678744308988 -8.764897986338253 6.437798316461233 0.9975014281217728 0.9443868424576183 0.034698349889217606 0.04730001487965122 0.17240646459126846 30.298747919868834 0.008071958306870871 0.008826518119593273 1.7183119628803652e-09 8.764897986338253 -0.0531145856641545 RLS(ph)STPLPK ddPTM_A549_MK2206_60min_R1 3 RLSSTPLPK 9 1 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 RLS(0.333)S(0.333)T(0.333)PLPK;RLS(0.666)S(0.332)T(0.002)PLPK;RLS(0.685)S(0.273)T(0.042)PLPK 71.15899999999999 0.0013507999999999999 24216900.0 2977.51 3626.2 3792.8999999999996 3117.66 4621.3 3286.1699999999996 2592.22 3317.6200000000003 5084.9 5401.4 4461.4 True False 3480.0408948696568 3810.7580912475123 4330.790253409863 3881.4868399570764 3941.5128917990924 3633.9103282168967 3063.1928197608295 3787.902794785135 3933.178268916738 4181.21998856478 3353.5112516239637 1.0377304961134155 1.1363486821170268 1.291419628102528 1.1574396352710719 1.1753390986508199 1.0836135785908418 0.9134285201152835 1.1295333489490498 1.1728537564953945 1.2468185358078019 1.0 11.711456727220167 -7.29196400141428 6.905517927195069 1.073510372532858 1.1655918821818403 0.09173329311172018 0.09878837800616555 0.2869147278255654 49.61673669002491 0.014451891227808291 0.023427443509849558 5.1054731739006554e-08 7.29196400141428 0.09208150964898221 RLS(ph)STPLPK ddPTM_A549_PD325901_60min_R1 2 RLSSTPLPK 9 1 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 RLS(0.935)S(0.062)T(0.003)PLPK;RLS(0.333)S(0.333)T(0.333)PLPK 63.091 0.010075 11787000.0 774.12 861.56 773.52 792.92 859.9 650.27 619.3 898.08 950.51 750.78 1156.1 True False 852.7080925229759 934.1666848450824 826.015718753627 841.896867548023 799.503590493955 644.9744167163311 642.8678003939632 880.1670898698688 910.5633701875629 703.3756226710838 1013.9070291217195 0.841012112581585 0.9213533963309133 0.8146858587903761 0.830349177357319 0.788537378211602 0.636127769303493 0.6340500479130093 0.8680944747294033 0.8980738312627379 0.6937279281714532 1.0 9.985709654188389 -8.981440656418192 1.518500641500059 0.965081428155219 0.7859709002024083 0.0 0.11665871328366298 0.25828140351563234 1.2009123639425574 0.01939067945686709 0.019119360626953828 1.0436607325942804e-09 8.981440656418192 -0.17911052795281068 RLS(ph)THSPFR ddPTM_A549_PD325901_60min_R1 2 RLSTHSPFR 9 1 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A2R8Y5C8;A0A2R8Y783;A0A1B0GWG0;A0A2R8Y6D0 P11171;A0A1B0GWG0 EPB41 Protein 4.1 1 RLS(0.995)T(0.005)HSPFR;RLS(1)THSPFR 153.25 7.2484e-06 145220000.0 2821.5 3506.2 3239.2 2962.9 3640.6 3658.0 3172.9 3285.0 3344.2 3695.6 3550.2 True False 3107.9366029214816 3801.679779009971 3459.031590891962 3145.9116037658746 3384.8968153881797 3628.2104608060326 3293.646445777501 3219.4780979673524 3203.6549037687646 3462.2591853049585 3113.547906572033 0.9981977782841539 1.221012135700703 1.110961415943107 1.0103944754232073 1.0871510305794194 1.1652977791501642 1.05784350991527 1.034022341898682 1.0289402957335376 1.1119980450587803 1.0 11.604343762060083 -8.168947245114998 2.67249297752415 1.014780329482118 1.1006854681810059 0.07469963416687708 0.066185244523827 0.2540473328070061 3.5491185549251694 0.00947703642527656 0.012436897656273168 6.7772382749416535e-09 8.168947245114998 0.08590513869888783 RLS(ph)TIFEECDEELER ddPTM_A549_MK2206_60min_R1 2 RLSTIFEECDEELER 15 1 Q5T5P2;Q5T5P2-3;A0A0U1RRK8 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 RLS(0.779)T(0.221)IFEECDEELER;RLS(0.924)T(0.076)IFEECDEELER 76.015 0.00026774 8426200.0 1765.94 1481.46 1592.75 1169.88 2856.7 2568.4 2333.0 2610.9 3556.7 2859.7 2814.4 True False 2063.9874989122195 1556.8599861727257 1818.6259000022567 1456.5006525179083 2436.483214247608 2840.1863832340637 2756.875901158856 2981.0030705459076 2751.1131288828037 2213.691783852093 2115.506806511519 0.9756468249401405 0.7359276658343612 0.8596644049570229 0.6884878120149777 1.1517255377047833 1.3425560128154563 1.303175150594272 1.4091200564188193 1.3004510883230873 1.0464120356589548 1.0 11.046787612145344 -6.83057635083364 6.846030886748254 1.1949756142030332 0.813191803048511 0.674132684015027 0.1354194304425638 0.12355883108095946 9.894868575076151 0.023716218771839485 0.045224670849255084 1.4771467700199147e-07 6.83057635083364 -0.3817838111545222 RLS(ph)TIFEECDEELER ddPTM_A549_PD325901_60min_R1 4 RLSTIFEECDEELER 15 1 Q5T5P2;Q5T5P2-3;A0A0U1RRK8 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 RLS(0.799)T(0.201)IFEECDEELER;RLS(0.907)T(0.093)IFEECDEELER;RLS(0.974)T(0.026)IFEECDEELER;RLS(0.992)T(0.008)IFEECDEELER 140.97 8.265e-14 26469400.0 2152.33 2416.15 2359.73 2429.17 2189.0 2087.48 2614.05 2187.62 2024.62 2741.22 2897.74 True False 2370.832957138399 2619.767439979162 2519.8754680092266 2579.214313854652 2035.2521916400376 2070.4802549817878 2713.529103213048 2143.98620294531 1939.5322622057051 2568.138901380467 2541.3363502873203 0.932907978461944 1.0308621445102986 0.9915552767048457 1.0149047423663733 0.8008590407208139 0.8147210638795223 1.0677567740713503 0.8436451958446641 0.7631938456263077 1.0105466366504836 1.0 11.311371615888932 -6.737803519654195 24.994670023835297 0.8854722700655313 0.9952220294879209 0.17344991927626185 0.0936184830401877 305.7673913731313 323344.0862201125 0.01505469391691395 0.03132502319915709 1.828927459038893e-07 6.737803519654195 0.10974975942238963 RLS(ph)TPQR ddPTM_A549_MK2206_60min_R1 1 RLSTPQR 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 RLS(0.943)T(0.057)PQR 55.06399999999999 0.032909 21406000.0 1860.4 2830.4 2460.8 3119.1 2462.9 1675.7 1451.8 1942.3 3298.5 3227.0 2980.3 True False 2174.3900375869457 2974.455270384138 2809.7784427722845 3883.2796400217208 2100.610672583902 1853.0214617603638 1715.5732675964123 2217.6269730442814 2551.39501662213 2498.0184587511653 2240.2092579044465 0.9706191642208148 1.327757779720331 1.254248205991537 1.7334450459571118 0.9376850243663716 0.8271644513663563 0.7658093821115652 0.9899195645315343 1.1389092369918938 1.1150826423634552 1.0 11.129417785355928 RLS(ph)TPQR ddPTM_A549_PD325901_60min_R1 1 RLSTPQR 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 RLS(0.996)T(0.004)PQR 113.18 0.0031863000000000004 101700000.0 1004.4 953.34 1082.4 855.81 1116.8 1071.8 893.43 950.1 1198.3 1353.8 1225.4 True False 1106.3659485997998 1033.6813075470216 1155.8581729999564 908.6714400144697 1038.3598207508421 1063.071616154157 927.4299675536555 931.1495101609692 1147.9396182004991 1268.320836959047 1074.6835684506134 1.0294806593115249 0.9618471314652132 1.0755334937021264 0.8455246424996655 0.9662005182119424 0.9891950034062608 0.8629795735043614 0.8664406319186778 1.068165227328729 1.1801807287214814 1.0 10.069696217566241 -8.784163334674645 24.999924068435167 1.0321891356109065 0.949762816102316 0.2959833148253703 0.08186229986432199 256.4525570247621 282136.82509905274 0.012162317005759003 0.01295209668879781 1.6437534044658225e-09 8.784163334674645 -0.08242631950859047 RLS(ph)TSPDVIQGHQPR ddPTM_A549_MK2206_60min_R1 2 RLSTSPDVIQGHQPR 15 1 Q9Y385 Q9Y385 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 1 RLS(0.957)T(0.036)S(0.007)PDVIQGHQPR;RLS(0.72)T(0.264)S(0.016)PDVIQGHQPR 147.06 2.5497e-14 127758000.0 4988.6 5168.13 4940.8 4546.65 7061.299999999999 4946.87 4869.650000000001 4593.05 6720.28 6901.200000000001 6848.5 True False 5830.553720439818 5431.16574213199 5641.479734252802 5660.579454106873 6022.59212404755 5470.344499933452 5754.402371229417 5244.128903125697 5198.147310081966 5342.214126908439 5147.828441015541 1.132623937888962 1.055040160013676 1.0958950553410198 1.0996053032781679 1.1699286782873906 1.0626508949576197 1.1178310305333745 1.0187070068891337 1.009774775838586 1.0377607156338235 1.0 12.329748259079224 -8.331575469028987 4.634029994467316 1.0051330107037741 1.103267001227802 0.6427948571892854 0.03128315885817635 0.08455944648109216 3.526224846440837 0.00465296507775177 0.005678355604077227 4.660414351452392e-09 8.331575469028987 0.09813399052402794 RLS(ph)TSPDVIQGHQPR ddPTM_A549_PD325901_60min_R1 3 RLSTSPDVIQGHQPR 15 1 Q9Y385 Q9Y385 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 1 RLS(0.804)T(0.174)S(0.022)PDVIQGHQPR;RLS(0.925)T(0.049)S(0.027)PDVIQGHQPR;RLS(0.669)T(0.269)S(0.063)PDVIQGHQPR 178.43 3.3138e-28 273730000.0 8571.6 7800.299999999999 7478.299999999999 8311.699999999999 9127.2 8937.7 9193.4 9129.699999999999 9487.8 10385.300000000001 11538.100000000002 True False 9441.782521921592 8457.658656155229 7985.822408671082 8825.094831759701 8486.136959130628 8864.914334484989 9543.259867821509 8947.600971388903 9089.06076071326 9729.57038563362 10118.986846042133 0.9330758766244055 0.8358206987355948 0.7891918954114066 0.8721322565224486 0.8386350420496727 0.8760673839547827 0.9431042863302259 0.8842388183248407 0.8982184579346785 0.961516259845636 1.0 13.304777228340319 -10.726161955260876 0.24881689584486708 1.073411407926705 0.8421234682624075 0.533953671535487 0.04016671564357339 2.5549348977351625 0.21153638381773338 0.18008275325901899 0.030437542628526663 1.8786161205849916e-11 10.726161955260876 -0.2312879396642975 RLS(ph)TSPVR ddPTM_A549_PD325901_60min_R1 1 RLSTSPVR 8 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;A0A0J9YW26;A0A0J9YY18;A0A0J9YWS4;A0A0J9YWE1;A0A0J9YWN0;A0A0J9YW31 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 RLS(0.494)T(0.494)S(0.011)PVR 48.073 0.015153999999999999 9438000.0 908.6 1125.2 846.37 972.77 1172.1 1035.0 945.3 1235.9 1010.2 1149.4 1383.2 True False 1000.8404031240328 1220.0245528897437 903.8097578362654 1032.8557935790368 1089.775739525486 1026.5713031531566 981.2739087880085 1211.2490049552064 967.7448070651297 1076.8266878421693 1213.0751688272314 0.8250440111568836 1.005728733256679 0.7450566799665386 0.8514359374593201 0.8983579645596504 0.8462553100857041 0.80891434760525 0.9984945995772129 0.7977616160429032 0.8876833979572895 1.0 10.244453235231195 -10.988804535074767 1.2014987603589542 1.0017193563572935 0.860184440303886 0.06630087363389658 0.08221102143206188 0.45491135618193324 1.1445123203984253 0.05419375995027992 0.011789032304577021 1.0261136500527797e-11 10.988804535074767 -0.1415349160534075 RLS(ph)VELTSSLFR ddPTM_A549_MK2206_60min_R1 2 RLSVELTSSLFR 12 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0;A0A2R8Y7Z0;A0A2R8YG06 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RLS(1)VELTSSLFR;RLS(1)VELTSSLFR 86.641 0.00012314 8491300.0 548.97 336.93 473.70000000000005 362.774 699.8 531.98 489.44 547.11 748.66 569.0899999999999 865.0999999999999 True False 641.6227149721061 354.07829785561336 540.8777829735172 451.6536462855439 596.8603470194541 588.2737705002558 578.3649125860227 624.6645179541043 579.089705364354 440.5321737498295 650.271794454631 0.9866992855044886 0.5445081593190909 0.8317718646049223 0.6945613359477418 0.9178628876561193 0.904658291374345 0.8894202662920124 0.9606206562872637 0.8905348660401672 0.6774585296588088 1.0 9.344899037998651 -6.835387517221011 6.428717762901798 0.9391423616148044 0.7538648255010787 0.11819653367774263 0.13022794773411622 0.14504893676760414 9.938195317150962 0.013829170337577145 0.02642330815767032 1.4608730682810867e-07 6.835387517221011 -0.18527753611372566 RLS(ph)VELTSSLFR ddPTM_A549_PD325901_60min_R1 2 RLSVELTSSLFR 12 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0;A0A2R8Y7Z0;A0A2R8YG06 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RLS(1)VELTSSLFR;RLS(0.998)VELT(0.001)S(0.001)S(0.001)LFR 108.63 4.654e-05 12764800.0 2501.29 2504.29 2670.13 2435.5 2369.0 3027.71 2790.3100000000004 2980.92 2794.94 3213.41 3181.58 True False 2755.2191194476254 2715.335307106519 2851.3410785960605 2585.9353035781805 2202.6096126063258 3003.0533335940504 2896.496773966219 2921.4632121134987 2677.4783914656628 3010.51474419602 2790.265829697326 0.9874396518508409 0.9731457405264734 1.0218886846725137 0.9267702295801292 0.7893905982589673 1.076260656469354 1.0380719797871074 1.0470196713946802 0.9595782462619707 1.0789347424014384 1.0 11.446186859374917 RLS(ph)VGSSMR ddPTM_A549_MK2206_60min_R1 2 RLSVGSSMR 9 1 Q8N370-4;Q8N370-2;Q8N370;Q8N370-3 Q8N370-4 SLC43A2 Large neutral amino acids transporter small subunit 4 1 RLS(0.998)VGS(0.002)SMR;RLS(0.996)VGS(0.003)S(0.001)MR 57.175 0.0058704 6884300.0 452.97 504.12 454.69 285.97 625.59 496.31 530.28 457.54 1083.08 969.03 878.7 True False 529.4202619467636 529.7775547293851 519.1718791222895 356.03266283768113 533.566539714062 548.8291947760856 626.6250119445002 522.3976961574834 837.7641093233577 750.1254499794362 660.4945391137263 0.8015513082926582 0.802092255660824 0.7860350818629503 0.539039525316012 0.8078288435662456 0.8309367637051519 0.9487209580647353 0.790919023885427 1.2683891534478053 1.1357027281194174 1.0 9.367402823273906 -8.745517878281841 24.889699130760263 1.1267393132930175 0.7878674220861168 0.6736783801506996 0.1073027938565388 115.75829922967942 180962.03849318356 0.02235256284836949 0.02530452364603477 1.7967271141060785e-09 8.745517878281841 -0.33887189120690064 RLS(ph)VGSSMR ddPTM_A549_PD325901_60min_R1 2 RLSVGSSMR 9 1 Q8N370-4;Q8N370-2;Q8N370;Q8N370-3 Q8N370-4 SLC43A2 Large neutral amino acids transporter small subunit 4 1 RLS(1)VGSSMR;RLS(1)VGSSMR 93.345 0.00040954 9464600.0 767.97 712.12 672.11 905.02 848.96 657.5 965.59 840.92 1115.25 776.62 906.9300000000001 True False 845.9337490503665 772.1328515853577 717.7234263257582 960.9210299504507 789.3319783530042 652.1455379934298 1002.3360558411229 824.1471909110217 1068.3799208863454 727.5840806612019 795.3833595029502 1.0635547487176575 0.9707681740637343 0.9023616319736396 1.2081231251191227 0.9923918685528855 0.8199134797099196 1.2601923888217894 1.0361634815016076 1.3432263928101236 0.9147589925892877 1.0 9.635506569099517 -7.779647994759317 24.999872482386 1.161438767833074 0.9974992121334091 0.09622083524722214 0.1463062407554101 289.5640924071299 397561.595546799 0.02384320875140001 0.032978116287326636 1.66093258444665e-08 7.779647994759317 -0.1639395556996649 RLS(ph)VLEEEATEGGTSR ddPTM_A549_MK2206_60min_R1 1 RLSVLEEEATEGGTSR 16 1 O75808;A0A1B0GVE3;O75808-2 O75808 CAPN15 Calpain-15 1 RLS(1)VLEEEATEGGTSR 104.06 4.1883999999999996e-07 5851400.0 370.2 414.44 416.34 298.47 509.05 450.99 426.2 388.82 612.96 397.45 681.05 True False 432.6807094789763 435.5332257836357 475.38327245766095 371.59516339882765 434.16941933445736 498.7134624570666 503.63502317784196 443.9364257113098 474.1255386959832 307.6657689589868 511.92648897621825 0.8452008614445358 0.8507729823761251 0.9286162812328023 0.7258760220475527 0.848108915408413 0.9741896018204179 0.9838034054167463 0.8671878390179045 0.9261594172322833 0.6009959937300285 1.0 8.99979284843046 -7.237693584263266 8.25323050431553 0.9582855029571422 0.8387705174042329 0.0 0.12087391599692139 0.17090176637590762 52.794694931813666 0.008526857101029477 0.014620923906065912 5.785040660151248e-08 7.237693584263266 -0.11951498555290929 RLS(ph)VLEEEATEGGTSR ddPTM_A549_PD325901_60min_R1 2 RLSVLEEEATEGGTSR 16 1 O75808;A0A1B0GVE3;O75808-2 O75808 CAPN15 Calpain-15 1 RLS(1)VLEEEATEGGTSR;RLS(1)VLEEEATEGGTSR 160.47 8.405e-21 21901000.0 1014.29 1190.51 984.65 1268.4 1491.31 1126.8600000000001 1062.33 1374.6599999999999 1237.03 1195.76 1316.34 True False 1117.2599741191673 1290.8384557952083 1051.4742701814548 1346.7461872545935 1386.5655303402023 1117.6832257692417 1102.7575494792818 1347.241327900092 1185.041930987703 1120.2595095303216 1154.438524966771 0.9677951228726763 1.1181526152138448 0.9108101015701292 1.1665811198507585 1.2010735092023308 0.9681617527459185 0.9552328041989272 1.1670100215504076 1.0265093422985108 0.9703933863109487 1.0 10.172975634831763 -8.985773520509312 23.66686024045839 1.0116951591588759 1.0586869215448427 0.06678329457137533 0.09441408207302025 110.8458919130664 184407.01675037056 0.016213744888170022 0.016336770684214276 1.0333001192044618e-09 8.985773520509312 0.04699176238596681 RLS(ph)VYR ddPTM_A549_MK2206_60min_R1 1 RLSVYR 6 1 H3BT57;P29590-12;P29590-13;P29590-11;P29590-14;P29590-10;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590 H3BT57;P29590-2 PML Protein PML 1 RLS(0.999)VY(0.001)R 44.395 0.053123000000000004 2941900.0 212.48 198.71 254.39 103.25 193.49 259.46 170.92 212.13 390.85 358.34 0.0 True False 248.34142936275768 208.82349024096666 290.46632723376183 128.54625463506864 165.02787731465313 286.91588498439114 201.97395157568448 242.20007712087912 302.32309905919624 277.39074512206156 0.0 0.0 RLS(ph)VYR ddPTM_A549_PD325901_60min_R1 2 RLSVYR 6 1 H3BT57;P29590-12;P29590-13;P29590-11;P29590-14;P29590-10;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590 H3BT57;P29590-2 PML Protein PML 1 RLS(1)VYR;RLS(0.998)VY(0.002)R 67.169 0.049922 3147100.0 296.54 443.76 377.99 348.29 417.88 451.74 262.2 356.5 405.84 402.36 359.83 True False 326.6445224987901 481.1572125758552 403.6426744385195 369.8030822760191 388.52955040773804 448.0611792139194 272.1781644813453 349.3893278311605 388.7839561466167 376.9549209328129 315.57319115030526 1.0350832442645979 1.5247087714326262 1.2790778360075188 1.1718456847618737 1.2311868096003256 1.4198328368156947 0.8624882344701732 1.1071578246478764 1.2319929799152098 1.194508695617531 1.0 8.301830839241049 -7.7420264815561195 24.99950112839703 1.0952719892638907 1.2814556269316701 0.2999919778917821 0.14939687822421802 259.0259246833849 333567.1889899648 0.023157774890716146 0.03432016850966586 1.811229647647537e-08 7.7420264815561195 0.18618363766777946 RLS(ph)YNTASNK ddPTM_A549_MK2206_60min_R1 2 RLSYNTASNK 10 1 P49207 P49207 RPL34 60S ribosomal protein L34 1 RLS(0.602)Y(0.001)NT(0.397)ASNK;RLS(0.984)Y(0.001)NT(0.015)ASNK 74.53699999999999 0.00067258 24585000.0 5688.1 5236.1 5852.5 5877.6 6883.1 4747.8 4515.9 5131.299999999999 7064.9 7267.7 7717.4 True False 6648.112219306767 5502.595124808645 6682.472503382963 7317.612263855488 5870.605107987431 5250.2090446654265 5336.380575243583 5858.677488947188 5464.711430327019 5625.921522363138 5800.956590595503 1.1460372294605117 0.9485668508068891 1.1519604394586525 1.2614492367894605 1.0120063848615661 0.9050591850966533 0.9199138955624854 1.0099502379392498 0.9420362564316368 0.9698265164548668 1.0 12.502075108128825 -6.9853326186127624 24.994100269712206 0.9661670406147859 1.118626545708809 0.5289609345710726 0.07429178495192236 158.74090554921966 270502.5839822726 0.010755889376612343 0.020321206656870882 1.0343496727612841e-07 6.9853326186127624 0.15245950509402306 RLS(ph)YQGQSR ddPTM_A549_MK2206_60min_R1 2 RLSYQGQSR 9 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 RLS(1)YQGQSR;RLS(0.981)Y(0.019)QGQSR 72.29 0.0011365 10451200.0 2418.2 2755.9 2425.1 1661.63 2594.3 1938.46 2103.1 2267.3 2717.2 3245.5 3527.4 True False 2826.3330406862797 2896.163538599366 2769.015645955406 2068.729424593406 2212.681906648428 2143.5865505543934 2485.206047032659 2588.6967183150377 2101.758538476777 2512.3392959023568 2651.449228712596 1.0659578203798374 1.0922945486704985 1.0443404369088727 0.7802259240686543 0.8345179242684537 0.8084584563571697 0.9373010126387916 0.9763327505131872 0.7926829281574742 0.9475343780662232 1.0 11.372565407952798 -6.107871224579223 6.491375289442025 0.8900711290771506 1.0765177791456035 0.5639371179148562 0.07185904879167075 0.16293781199879764 8.453059136340755 0.012440828676826252 0.03344723774155954 7.800613771978266e-07 6.107871224579223 0.18644665006845296 RLS(ph)YQGQSR ddPTM_A549_PD325901_60min_R1 2 RLSYQGQSR 9 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 RLS(1)YQGQSR;RLS(1)YQGQSR 114.76 8.936700000000001e-05 20157800.0 3203.2 3604.2 3294.8 3866.1 4134.6 3737.7 3203.4 3570.6 4204.9 4146.5 4467.0 True False 3528.3865059287923 3907.938582940999 3518.404941241921 4104.900216449844 3844.1999595956586 3707.2614104304857 3325.307139967743 3499.3815819184883 4028.1826759336386 3884.689282353883 3917.5873186460685 0.9006529322614345 0.9975370719475363 0.898105046566746 1.0478133306467083 0.9812672052767996 0.9463123879295504 0.848815066390653 0.8932491600794457 1.0282304766408608 0.9916024752950355 1.0 11.935749715779531 -8.77940439329745 24.992869516222203 1.01333106480146 0.942036886009098 0.23613275580138038 0.05343752794557343 237.85164296070275 330897.1294322631 0.009471014394245006 0.01009264193629486 1.6618644846157993e-09 8.77940439329745 -0.071294178792362 RLSKPPFQTNPS(ph)PEMVSK ddPTM_A549_MK2206_60min_R1 4 RLSKPPFQTNPSPEMVSK 18 2 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 RLS(0.001)KPPFQT(0.006)NPS(0.992)PEMVS(0.002)K;RLSKPPFQT(0.001)NPS(0.999)PEMVSK;RLSKPPFQT(0.004)NPS(0.996)PEMVSK;RLS(0.069)KPPFQT(0.434)NPS(0.496)PEMVS(0.001)K 86.546 3.7324e-06 28522000.0 6276.9 7049.1 8461.8 7389.299999999999 10231.4 7513.800000000001 7192.4 7448.0 10588.8 10792.0 11328.399999999998 True False 7336.287264528865 7407.869080859538 9661.810479133008 9199.678831718276 8726.374613453629 8308.905328743225 8499.165980066418 8503.776808543385 8190.453706838987 8354.079704630489 8515.24563206548 0.8615473447886149 0.8699536573512403 1.1346484759934534 1.0803773877145078 1.0247942326634842 0.9757681325662235 0.9981116631634781 0.9986531423733794 0.9618575976242613 0.981073249745363 1.0 13.055832431365854 -5.575638754807293 24.944924614800403 1.0005291730212993 0.86364848886177 0.5609307856145069 0.049957899943862016 49.940468375954545 23611.67869973404 0.007393140528122849 0.028633520659655 2.6568145756292715e-06 5.575638754807293 -0.13688068415952925 RLSKPPFQTNPS(ph)PEMVSK ddPTM_A549_PD325901_60min_R1 3 RLSKPPFQTNPSPEMVSK 18 2 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 RLS(0.015)KPPFQT(0.05)NPS(0.934)PEMVSK;RLSKPPFQT(0.001)NPS(0.999)PEMVSK;RLSKPPFQT(0.015)NPS(0.985)PEMVSK 110.44 5.0297e-10 38699000.0 6499.1 6985.3 7542.200000000001 7113.4 8381.0 7517.1 7484.900000000001 7759.7 8664.8 8365.1 7730.299999999999 True False 7158.883847615455 7573.975745912481 8054.059046932992 7552.77856229646 7792.347472880382 7455.883229886566 7769.7419653944435 7604.926696133108 8300.64858865367 7836.9261584031065 6779.522106409157 1.055957003348018 1.1171843128518266 1.1879980506765995 1.1140576642056068 1.1493948025501282 1.0997653098347446 1.146060421876811 1.121749671550394 1.2243707533317851 1.155970293391965 1.0 12.726967864953927 -11.039660756604373 1.3480350861899362 1.0002874783290663 1.145219299390483 0.0 0.06226946079076128 0.2597182482839499 0.8439999993115102 0.033889835264003514 0.007654440119668631 9.1272352288688e-12 11.039660756604373 0.14493182106141678 RLSLS(ph)PKK ddPTM_A549_MK2206_60min_R1 1 RLSLSPKK 8 2 Q5FBB7-6;Q5FBB7;Q5FBB7-5;Q5FBB7-4;Q5FBB7-3;Q5FBB7-2 Q5FBB7-6 SGOL1 Shugoshin-like 1 1 RLS(0.007)LS(0.993)PKK 45.973 0.0091159 3667200.0 915.09 858.28 893.15 682.35 1078.1 869.8 835.42 573.91 1221.4 1466.9 1147.4 True False 1069.534820197505 901.9627859897175 1019.8121001958979 849.5257806318551 919.5129181504343 961.8416586734882 987.205000148364 655.2635000256619 944.7548501750089 1135.5262711937048 862.4689133709912 1.2400850669703436 1.0457916476831184 1.1824334586274248 0.9849929283960538 1.0661403604177273 1.1152189299369584 1.1446267625923319 0.7597531805112147 1.0954074234193556 1.3165996519868282 1.0 9.752328647325353 -2.0000000040435224 0.5038878355125025 1.0330130548732246 6.858540624425521 0.0710009665035084 0.1352639270876943 113.44817640718803 1.0675287550623145 0.018719653843758993 705.6014983006899 0.009999999906894456 2.0000000040435224 5.825527569552296 RLSLS(ph)PKK ddPTM_A549_PD325901_60min_R1 1 RLSLSPKK 8 2 Q5FBB7-6;Q5FBB7;Q5FBB7-5;Q5FBB7-4;Q5FBB7-3;Q5FBB7-2 Q5FBB7-6 SGOL1 Shugoshin-like 1 1 RLS(0.122)LS(0.878)PKK 51.276 0.0060697 7124500.0 908.49 1246.8 1153.9 1026.2 1435.9 1624.9 1751.2 1635.9 1617.6 1510.2 1615.4 True False 1000.7192360050099 1351.872211644981 1232.2105929643847 1089.5860433307028 1335.0473375860809 1611.667353133879 1817.8428742934102 1603.2706911612765 1549.6178973555282 1414.8457142676548 1416.7160408643067 0.7063654304319823 0.9542294804682483 0.8697653992910538 0.7690927552891762 0.9423535126852932 1.1376078950518813 1.2831384849601795 1.1316810461065698 1.0938098056757661 0.9986798154727529 1.0 10.468334905663372 -7.031924170899208 4.539884100131744 1.0777822802345982 0.8379765229728541 0.6567598082454185 0.0944677723127925 0.12035955076680865 5.89408311984214 0.015118321463307868 0.027545275322865877 9.291286012192624e-08 7.031924170899208 -0.23980575726174413 RLSPQLQHNIT(ph)EDAYCETHLEPTR ddPTM_A549_MK2206_60min_R1 1 RLSPQLQHNITEDAYCETHLEPTR 24 1 Q8N7C3-2 Q8N7C3-2 1 RLS(0.41)PQLQHNIT(0.579)EDAY(0.011)CETHLEPTR 59.275 0.00038068 24016000.0 983.47 1349.0 923.18 888.16 1448.0 1225.4 1197.3 1270.1 2020.8 1618.5 1419.1 True False 1149.4556924670142 1417.6583379551319 1054.100805753623 1105.7592398710174 1235.0011181540015 1355.0710146453118 1414.833911897771 1450.140564518119 1563.0920265544933 1252.879725902931 1066.6983048324669 1.0775827497424821 1.329015272202749 0.98819019490162 1.0366185404641524 1.1577792076345035 1.270341396912725 1.3263674513104073 1.3594664563996608 1.4653553113126854 1.1745399052637526 1.0 10.058936479879813 -7.105243067022528 4.516351262187949 1.2482842032041417 1.113251463860062 0.2272739717724369 0.1357575533831163 0.4379750051459965 14.72478680138479 0.028053018131207193 0.04980694278559003 7.847962749273392e-08 7.105243067022528 -0.13503273934407978 RLSQPES(ph)AEK ddPTM_A549_MK2206_60min_R1 1 RLSQPESAEK 10 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RLSQPES(1)AEK 88.552 0.00029336 6491100.0 1861.3 2106.7 1928.5 1631.9 2756.2 2069.3 1908.9 2394.4 2954.7 2578.7 2947.7 True False 2175.4419355840596 2213.9220315567627 2201.99029863717 2031.7155732587744 2350.7666311160624 2288.271952509829 2255.7224207981762 2733.8135325424623 2285.465167686342 1996.169879015069 2215.704737618676 0.981828444308925 0.9991954225526325 0.9938103490286139 0.9169613345875481 1.0609566298271962 1.0327513019488077 1.018060927749114 1.2338347642297423 1.0314845335135405 0.9009187213096129 1.0 11.113549926900081 -6.784378550944846 24.995955887098393 1.0363111442067285 0.9763137013078801 0.14912052735705172 0.07629158338574615 342.4845457661087 373191.8146858014 0.009867440973730698 0.018656201366468284 1.642939038058029e-07 6.784378550944846 -0.05999744289884845 RLSQS(ph)DEDVIR ddPTM_A549_MK2206_60min_R1 1 RLSQSDEDVIR 11 1 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 RLS(0.457)QS(0.543)DEDVIR 65.395 0.0045817 10915000.0 569.28 757.88 725.42 452.45 601.66 552.08 506.01 410.84 561.35 773.5 633.94 True False 665.3605464402796 796.452854832791 828.2954640587891 563.3002703112526 513.1566110141827 610.5007391589559 597.9454671004686 469.07782814473165 434.2051212917482 598.7658127809191 476.5152021460747 1.3963049729446295 1.6714112188778398 1.73823512939022 1.1821244480224873 1.0768945223637914 1.2811778856360772 1.2548297817310132 0.9843921579671593 0.9112093787065444 1.2565513336914877 1.0 8.896378430585498 -6.797461880003342 0.5962981848253943 0.9599088101508421 1.6613222767507048 0.5274544020768492 0.17596801236156934 0.43624864674416 0.25345457905106183 0.031582753683777366 0.15147231095373928 1.594182803227241e-07 6.797461880003342 0.7014134665998627 RLSREQS(ph)T(ph)PPKS(ph)PQ ddPTM_A549_PD325901_60min_R1 1 RLSREQSTPPKSPQ 14 3 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 3 RLS(0.297)REQS(0.727)T(0.977)PPKS(0.999)PQ 41.513000000000005 0.029623000000000003 14339000.0 2899.5 2496.7 2419.1 2621.8 2757.0 2718.1 2230.1 2882.9 3252.1 3483.8 3008.8 True False 3193.8551055009143 2707.1056711694127 2583.27467323004 2783.742631460181 2563.357831133662 2695.9646947831825 2314.9676758575442 2825.3982979087 3115.4255464823873 3263.8322734509748 2638.7366743546645 1.2103728032210759 1.0259097459322912 0.9789816082583579 1.0549527955990454 0.9714337379877295 1.0216876587136206 0.8773015126352833 1.0707390113489388 1.1806504137986042 1.2368919965267793 1.0 11.365631672629219 -8.501854878239579 24.86614466315661 1.0874328068015395 1.0151044892800136 0.1777337933498475 0.09570381317268348 1239.1597220867213 1465629.3157000095 0.01573689747793912 0.018917062598231553 3.1488003263336284e-09 8.501854878239579 -0.07232831752152591 RLSS(ph)FVTK ddPTM_A549_MK2206_60min_R1 2 RLSSFVTK 8 1 P27708;F8VPD4;H7C3Z5 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 RLS(0.378)S(0.622)FVTK;RLS(0.417)S(0.583)FVTK 66.595 0.0035156 7623200.0 2855.0 2477.0 3237.2 2517.8 3973.1 3107.8 2777.1000000000004 2546.1000000000004 4399.3 3340.3999999999996 3877.2 True False 3336.854201951587 2603.068719877584 3696.283637411587 3134.6611130283354 3388.6622531337453 3436.6653332093197 3281.6631226353447 2907.017472104229 3402.865574238513 2585.8013199914444 2914.384234723728 1.1449602843009847 0.8931796599992056 1.2682897448359207 1.0755826481903437 1.1627369558067133 1.179208044108536 1.1260228090502395 0.9974722747495932 1.1676104796665878 0.887254772099935 1.0 11.508975380659903 -10.98905837468324 1.1941726821558922 0.9983867542625683 1.1160355494173981 0.2583322937386432 0.10103213963962966 0.6870330742275634 1.7027413393823654 0.0678899123613253 0.014667929085520916 1.0255140748966236e-11 10.98905837468324 0.11764879515482984 RLSS(ph)FVTK ddPTM_A549_PD325901_60min_R1 1 RLSSFVTK 8 1 P27708;F8VPD4;H7C3Z5 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 RLS(0.084)S(0.916)FVTK 89.40299999999999 0.0011131 9008400.0 1983.3 2114.7 2523.8 2196.4 2567.6 3226.6 2671.8 2595.6 2700.4 2691.0 2439.5 True False 2184.6431559717084 2292.9131905402946 2695.080244842285 2332.0666396136776 2387.260633739132 3200.323639375819 2773.476811065058 2543.8287217911916 2586.911578893957 2521.089800751066 2139.4569652646246 1.0211204017845223 1.0717267174648168 1.259702947335955 1.090027365577428 1.1158254980108269 1.4958579169083581 1.2963461551665345 1.1890067260486126 1.2091440121928265 1.1783783650162079 1.0 11.063028944402301 -10.583313457377056 0.8860178470485414 1.0008341953019395 1.19849948578909 0.025786549213276944 0.1337252611295202 0.6825699930525112 0.9625755109841593 0.08528863889963276 0.023875679199132072 2.6102766750817098e-11 10.583313457377056 0.19766529048715054 RLSS(ph)LRAS(ph)TSK ddPTM_A549_MK2206_60min_R1 1 RLSSLRASTSK 11 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.46)S(0.54)LRAS(0.465)T(0.288)S(0.247)K 46.156000000000006 0.030885000000000003 82172000.0 3538.9 4903.6 4751.9 4901.6 6543.7 4227.2 3586.5 3189.7 4716.0 3836.8 3978.7 True False 4136.179802201918 5153.172295030973 5425.7908737847865 6102.492220041184 5581.130398386972 4674.519498211737 4238.120625592045 3641.849743046564 3647.8335299044884 2970.0642152266723 2990.678983466237 1.383023662876726 1.7230777102858355 1.8142337923197034 2.040503930304253 1.8661750155205115 1.5630295073642129 1.417109843290505 1.217733418792281 1.2197342309459775 0.9931069939791158 1.0 11.546257345966454 -8.0162171670901 1.1685456300399066 1.095938201877643 1.7788252408897733 0.7735795124970634 0.1609280098010759 0.15921603583477426 0.43324820200334685 0.03142459184512762 0.045950901384799354 9.6334718554155e-09 8.0162171670901 0.6828870390121304 RLSS(ph)LRAS(ph)TSK ddPTM_A549_PD325901_60min_R1 1 RLSSLRASTSK 11 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.468)S(0.549)LRAS(0.489)T(0.414)S(0.079)K 43.69 0.053252999999999995 563420000.0 4602.1 5121.0 4490.6 5098.1 5605.1 3639.2 4847.1 4815.6 4298.6 4594.9 4993.9 True False 5069.301804113042 5552.564642151061 4795.359120171478 5412.998058374839 5211.417112545262 3609.563561772913 5031.559042934892 4719.549080234881 4117.944790784168 4304.77722982946 4379.681958940363 1.1574588866584112 1.2678008801110456 1.0949103531096778 1.235934049349209 1.1899076602827416 0.8241611138919833 1.1488411921472597 1.077600867935339 0.940238316249904 0.9828972218044286 1.0 12.096610393548152 -7.22010402972322 22.518440678082133 0.9854696243520588 1.1909269645071041 0.5540834527135482 0.08620170530809387 85.39044992360236 46518.24994388749 0.012244763656123859 0.02120821398784679 6.024152678695827e-08 7.22010402972322 0.20545734015504535 RLSS(ph)LRAS(ph)TSKSESSQK ddPTM_A549_MK2206_60min_R1 4 RLSSLRASTSKSESSQK 17 3 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.455)S(0.548)LRAS(0.973)T(0.02)S(0.004)KSESSQK;RLS(0.461)S(0.539)LRAS(0.945)T(0.042)S(0.01)KS(0.002)ESSQK;RLS(0.559)S(0.601)LRAS(0.695)T(0.12)S(0.023)KS(0.001)ES(0.001)SQK;RLS(0.577)S(0.629)LRAS(0.738)T(0.045)S(0.012)KSESSQK 125.62 6.2099e-11 258913100.0 7752.1 12571.800000000001 14504.100000000002 11878.499999999998 16076.9 10090.1 8246.6 6084.799999999999 12929.2 14496.0 14420.2 True False 9060.464959351622 13211.650921500608 16560.999476517172 14788.73303324613 13712.009306940656 11157.827684733687 9744.900474280592 6947.339033918467 10000.756843689811 11221.34353209076 10839.266362726474 0.8358928230150608 1.218869476898563 1.5278708837220116 1.3643666036384976 1.2650311237015843 1.029389564878917 0.8990369041756247 0.6409418129817926 0.9226414878113811 1.035249356974763 1.0 13.403979493190125 -7.3825609740220335 3.297176559508036 0.929667992498355 1.2645746414508556 0.43971726123256105 0.18251507446725082 0.1937304000342077 3.954331559440251 0.028411446500570998 0.04688426755480153 4.1441839649143644e-08 7.3825609740220335 0.33490664895250066 RLSS(ph)LRAS(ph)TSKSESSQK ddPTM_A549_PD325901_60min_R1 3 RLSSLRASTSKSESSQK 17 3 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.474)S(0.527)LRAS(0.805)T(0.161)S(0.028)KS(0.005)ESSQK;RLS(0.488)S(0.53)LRAS(0.754)T(0.176)S(0.038)KS(0.01)ES(0.002)S(0.002)QK;RLS(0.529)S(0.593)LRAS(0.705)T(0.146)S(0.027)KSESSQK 88.036 2.2745e-06 98324000.0 8872.599999999999 9053.9 9532.0 10411.9 9272.1 11716.800000000001 10197.5 11429.699999999999 12213.0 9438.1 10131.4 True False 9773.3398203371 9816.903927664807 10178.898840572416 11055.019415859431 8620.859683008495 11621.382265492657 10585.571442786113 11201.725667073812 11699.730081851545 8842.176755283781 8885.302028236129 1.0999445814311009 1.104847521948966 1.1455883894802263 1.244191742804946 0.9702382266368351 1.3079332844918141 1.1913575260747231 1.2607028586621416 1.3167509719615151 0.9951464482788203 1.0 13.117205101685052 -5.852722500240607 4.16078000488605 1.1678208734553819 1.1019440821008482 0.03131486176443854 0.11830286448666681 0.6720893468214456 21.210228867478477 0.018506403645738346 0.06439519519026897 1.403710342389186e-06 5.852722500240607 -0.06587679135453373 RLSS(ph)LRAST(ph)SK ddPTM_A549_MK2206_60min_R1 1 RLSSLRASTSK 11 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.462)S(0.54)LRAS(0.037)T(0.789)S(0.172)K 49.595 0.013872 16695000.0 1174.8 1323.2 1479.7 1445.5 2008.9 1462.8 1251.1 999.08 1869.0 1536.1 1422.7 True False 1373.077518897627 1390.5452281558405 1689.543710082147 1799.6475648909613 1713.393471173738 1617.5925250719454 1478.408675499291 1140.7026495541786 1445.6744841797056 1189.0939431322172 1069.404325477522 1.283964807496459 1.300298862672843 1.5798923473848059 1.6828504635862243 1.6021942593215666 1.5126107932559938 1.382459973536329 1.0666710638605466 1.3518502307667097 1.1119217631752611 1.0 10.062591701869728 -9.897455013585285 0.36741667255866167 0.9464716755240036 1.4974276668669697 0.5003488261207842 0.15383131354157126 1.0178034197588053 0.2696207747368235 0.21976289007320265 0.07107584438235416 1.2663244329944975e-10 9.897455013585285 0.5509559913429661 RLSS(ph)LRAST(ph)SKSESSQK ddPTM_A549_MK2206_60min_R1 1 RLSSLRASTSKSESSQK 17 3 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 2 RLS(0.379)S(0.621)LRAS(0.027)T(0.816)S(0.136)KS(0.02)ES(0.001)SQK 107.9 4.6029e-08 164230000.0 6438.7 9930.1 10461.0 9527.3 14579.0 8129.2 6701.5 4480.1 8634.6 11077.0 11037.0 True False 7525.39514889866 10435.499675113595 11944.527100878104 11861.488927696742 12434.448412684516 8989.426548273768 7919.075804378944 5115.167894730828 6678.876886622841 8574.69800668939 8296.208294296344 0.9070885013907355 1.2578637499118743 1.439757377968678 1.429748206280155 1.4988110196357074 1.0835584437355572 0.9545415837525826 0.6165669560451507 0.8050517356482695 1.033568312476497 1.0 13.018236401254876 -7.57346304747156 3.1651197695344258 0.8821600368138487 1.3176842218283165 0.5577001411623272 0.17951013132873794 0.1450355072702304 2.9793077985161345 0.02879797791604268 0.04474405586196957 2.6701579514346478e-08 7.57346304747156 0.43552418501446777 RLSS(ph)SESPQR ddPTM_A549_MK2206_60min_R1 1 RLSSSESPQR 10 1 J3KS33;Q9H2G4 J3KS33 TSPYL2 Testis-specific Y-encoded-like protein 2 1 RLS(0.326)S(0.583)S(0.087)ES(0.004)PQR 73.082 0.0007616000000000001 6724400.0 794.8 923.78 902.38 805.85 947.36 686.28 730.44 821.12 1042.5 1177.4 1097.5 True False 928.9428090056467 970.7964562165984 1030.3510529863674 1003.2832861759817 808.0045989602035 758.9016940842052 863.1514930314938 937.5162745745358 806.3754145304137 911.4245222601863 824.9604605409289 1.1260452511827492 1.1767793762867669 1.248970226173947 1.2161592393387266 0.9794464554463526 0.9199249302040382 1.046294379327614 1.1364378287412753 0.9774715917920127 1.1048099464822383 1.0 9.688181163983465 -6.7617443189441095 24.999999731546747 0.9989126196575878 1.1949723004936317 0.586771776133538 0.0659875643235623 3.370906068812511 276397.42452340055 0.008642292715653987 0.017090233988741942 1.7308350493176884e-07 6.7617443189441095 0.19605968083604386 RLSS(ph)TPLPK ddPTM_A549_PD325901_60min_R1 2 RLSSTPLPK 9 1 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 RLS(0.014)S(0.493)T(0.493)PLPK;RLS(0.225)S(0.7)T(0.075)PLPK 61.419 0.0031961 26205000.0 4025.92 4676.68 4066.2000000000003 3911.1 5693.22 5522.8 4430.28 5178.4 5213.58 4906.8 4819.79 True False 4434.628434674338 5070.800236409886 4342.156784046955 4152.6797642474285 5293.3478677427565 5477.824147878504 4598.876729742239 5075.112749623789 4994.471363312827 4596.983810600272 4226.986385166137 1.0491229520485053 1.1996254007831595 1.0272464560768373 0.9824208989223447 1.2522746433058851 1.2959171496510995 1.0879800194959668 1.200645634306749 1.181567885063468 1.0875322018383062 1.0 12.045413750216284 -4.266801986624486 15.363478463392813 1.111762896153137 1.1234398099525764 0.0 0.1025089254302418 0.0 0.0 0.014750060597327742 0.0 5.41000932118331e-05 4.266801986624486 0.01167691379943947 RLSSLRAS(ph)TSK ddPTM_A549_MK2206_60min_R1 2 RLSSLRASTSK 11 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 RLS(0.029)S(0.088)LRAS(0.871)T(0.008)S(0.004)K;RLS(0.022)S(0.019)LRAS(0.668)T(0.218)S(0.073)K 47.545 0.0065663 10994400.0 4373.4 5673.1 6108.5 4745.299999999999 6263.1 4360.9 4726.3 3807.7999999999997 5351.299999999999 6386.9 6619.5 True False 5111.523000635748 5961.83655823073 6974.777152826107 5907.89871302461 5341.8062866783985 4822.367543468859 5585.007531781872 4347.567310898425 4139.239094270122 4944.094854105305 4975.695461094017 1.0272982019506205 1.1981916105693267 1.4017693018721342 1.187351348011485 1.073579829884501 0.9691846257826549 1.1224576695764823 0.8737607325233114 0.8318915670453871 0.993649007011019 1.0 12.280682472257888 -7.278907938345349 1.1313290182986568 0.9223099734508347 1.2169200590969298 0.5054965067215162 0.10815622972618863 0.27287925478854813 0.6883336882369481 0.019293035649671275 0.041257560974842615 5.261287832415262e-08 7.278907938345349 0.29461008564609514 RLSSLRAS(ph)TSK ddPTM_A549_PD325901_60min_R1 1 RLSSLRASTSK 11 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 RLS(0.022)S(0.018)LRAS(0.761)T(0.162)S(0.037)K 52.599 0.004603 15799000.0 4034.1 3715.3 3269.6 3569.3 4403.7 4326.4 3765.8 3306.5 3645.2 4369.5 4477.8 True False 4443.638862252542 4028.401369846485 3491.494717702014 3789.767554531552 4094.399303940261 4291.167232813347 3909.1095797248295 3240.5492636009308 3492.00492052446 4093.6090242964674 3927.0589871129087 1.131543701491332 1.0258061778715684 0.8890863949738854 0.9650396306671496 1.042612122042602 1.0927177938745767 0.9954293002863002 0.8251847691198839 0.8892163148004325 1.0424108824772207 1.0 11.939233553095766 -8.016707524259072 24.366740389504248 0.9357633808564636 1.018796207741365 0.2012221151602619 0.07885627454074925 672.2736700430445 980463.5017478275 0.01295116852237503 0.016947219534065167 9.62260094554381e-09 8.016707524259072 0.08303282688490143 RLSSS(ph)SATLLNSPDR ddPTM_A549_MK2206_60min_R1 2 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLS(0.267)S(0.267)S(0.451)S(0.014)ATLLNSPDR;RLS(0.117)S(0.067)S(0.814)S(0.001)ATLLNSPDR 184.83 1.086e-33 41080000.0 2720.9 3130.7 3511.6 3541.3 3438.9 2897.6 2647.7 2928.1 4853.200000000001 4026.6 4936.3 True False 3180.1214003818122 3290.0392576991308 4009.597683533463 4408.918658974996 2933.042365483283 3204.22210872879 3128.752817616075 3343.1671419301642 3753.957948967867 3116.9882634048463 3710.480475050743 0.8570645828121013 0.8866882011160934 1.0806141443120327 1.1882338927857319 0.7904750840773989 0.8635598894197039 0.8432203965642179 0.9010065312052193 1.0117174781566611 0.8400497683153069 1.0 11.857390300104043 -8.772384808501888 24.00613509074417 1.0055332655428728 0.9295126596020491 0.0 0.1191808479165271 256.85669713316605 563350.5080915584 0.019781074351562317 0.021166989953216087 1.6889437725329983e-09 8.772384808501888 -0.07602060594082372 RLSSS(ph)SATLLNSPDR ddPTM_A549_PD325901_60min_R1 1 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLS(0.02)S(0.128)S(0.831)S(0.02)AT(0.001)LLNSPDR 155.28 8.5165e-20 33687000.0 1173.6 1032.7 1191.2 1270.9 1165.5 1600.4 1414.4 1346.5 1519.7 1299.0 1781.3 True False 1292.7430080413433 1119.7292532609645 1272.0419952675052 1349.4006065766814 1083.6393007567222 1587.3668730109293 1468.2257659893787 1319.6430011911852 1455.832293899107 1216.9809183112727 1562.2113925910542 0.8275083731768363 0.7167591137610402 0.8142572774083541 0.8637759351751949 0.6936572770471342 1.0161024817378606 0.9398380865435934 0.8447275493250951 0.9319047990582704 0.7790116779860446 1.0 10.609373971437641 -7.121651571369555 0.26441408151792045 1.0054788914034263 0.6987084427321654 0.06361642878278728 0.098319965560263 1.9675473957231582 0.24199214343655262 0.053615584254983126 0.1944757457345499 7.556982710968751e-08 7.121651571369555 -0.3067704486712609 RLSSSSATLLNS(ph)PDR ddPTM_A549_MK2206_60min_R1 4 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLSSSSATLLNS(1)PDR;RLSSSSAT(0.18)LLNS(0.82)PDR;RLSSSSATLLNS(1)PDR;RLSSSSATLLNS(1)PDR 123.43 1.3582e-07 63544200.0 9675.4 9657.8 9235.6 9058.0 13708.399999999998 10299.4 8966.5 9817.1 15018.5 15106.9 15149.1 True False 11308.370979181223 10149.340768200931 10545.346954676404 11277.21040662907 11691.912519407666 11389.2756718116 10595.596985744061 11208.703988607838 11616.833729616315 11694.24079780229 11387.160376109881 0.9930808564799037 0.8912969022105036 0.9260734552224634 0.9903443908885762 1.026762786615103 1.0001857614744898 0.9304863228214024 0.9843282801323812 1.0201695019583887 1.0269672518476738 1.0 13.475120405606743 -6.324006330253115 4.856333019562535 1.00210861505198 0.9322151806053126 0.3863617887043197 0.03367658585481696 0.1413997453453566 6.784865582309467 0.0046657813005223535 0.011276014035597134 4.7423507278483734e-07 6.324006330253115 -0.0698934344466674 RLSSSSATLLNS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLSSSSATLLNS(1)PDR;RLSSSSATLLNS(1)PDR 91.1 2.443e-05 24338000.0 7937.6 8726.5 9502.5 9519.5 10115.9 9219.0 9008.3 9980.5 9232.0 10223.4 11834.0 True False 8743.419308647726 9461.912780654411 10147.396793174503 10107.497894646884 9405.394081960461 9143.923520549704 9351.11578603091 9781.431097949218 8844.011145144797 9577.89277926364 10378.493021906772 0.8424555752161941 0.9116846502360548 0.9777331614286896 0.9738887787766609 0.9062388982781693 0.8810453985225836 0.9010090160770655 0.942471231353407 0.8521479107301019 0.9228596829083725 1.0 13.341309356226288 -11.058500550637543 1.375470550374189 0.9998530704338273 0.9061429113648354 0.07405151132779031 0.04669014872190639 0.3769843723572093 1.2755963649246915 0.03236828393278742 0.007236650458719618 8.739758844847786e-12 11.058500550637543 -0.09371015906899194 RLSSSSATLLNS(ph)PDRAR ddPTM_A549_MK2206_60min_R1 3 RLSSSSATLLNSPDRAR 17 2 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLSSSSATLLNS(1)PDRAR;RLSSSSATLLNS(1)PDRAR;RLSSSSATLLNS(1)PDRAR 102.43 5.0612e-09 21627900.0 5847.1 6712.7 6181.2 6409.1 8453.099999999999 5773.6 6109.83 6001.299999999999 10156.3 9425.7 9923.9 True False 6833.947532129988 7054.347757740111 7057.787106007812 7979.329787715431 7209.660187753861 6384.558519794493 7219.907024079477 6852.00265321044 7855.914266278408 7296.4278235670445 7459.521744293512 0.916137490631744 0.9456836509842798 0.9461447191848427 1.0696838297736138 0.9665043463770591 0.8558938144631913 0.9678780049944438 0.9185579033203006 1.0531391335226195 0.9781361424609784 1.0 12.864867421945018 -8.763194405089529 24.999612927156974 1.0250934807817893 0.950374653991698 0.20739708757492992 0.051850723075752995 42.8505508901515 610387.7225309311 0.009025445788753637 0.009853195255974062 1.7250655207033792e-09 8.763194405089529 -0.07471882679009134 RLSSSSATLLNS(ph)PDRAR ddPTM_A549_PD325901_60min_R1 3 RLSSSSATLLNSPDRAR 17 2 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLSSSSATLLNS(1)PDRAR;RLSSSSATLLNS(1)PDRAR;RLSSSSATLLNS(1)PDRAR 132.83 1.1739e-12 31691000.0 4406.9 4478.2 4251.3 5288.2 5304.5 5366.5 4308.1 5733.1 5020.799999999999 4965.299999999999 5946.299999999999 True False 4854.285243811687 4855.59363024427 4539.818783143676 5614.840103626414 4931.930219531559 5322.797003257404 4472.047102982777 5618.748822970059 4809.793236302317 4651.790110616601 5214.942796701388 0.9308415131383938 0.9310924049474871 0.8705404757297149 1.0766829709384298 0.9457304541578397 1.020681762151684 0.8575448048656419 1.0774324938950608 0.922309874490792 0.8920117232271467 1.0 12.348435712408499 -10.040819778941925 0.004897552183592641 1.939941823732464 3.81091721508516e-07 0.0 0.07388419267949632 29736.79938273445 46.92383907297012 9442.60102236759 9143.801027464033 9.102909416314775e-11 10.040819778941925 -1.9399414426407424 RLSST(ph)PLPK ddPTM_A549_MK2206_60min_R1 1 RLSSTPLPK 9 1 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 RLS(0.292)S(0.292)T(0.416)PLPK 50.284 0.017574 11789000.0 788.74 842.02 919.62 846.5 970.81 1023.3 836.6 773.62 1141.0 1317.0 1484.7 True False 921.860029158422 884.8752214417939 1050.0359442223041 1053.892538000829 828.0051350242306 1131.5849267884341 988.5993908741962 883.2830041118864 882.5653218025911 1019.4887853037757 1116.0080143645723 0.8260335206313967 0.7928932499159697 0.9408856663275568 0.944341370703229 0.7419347570686368 1.0139577065965166 0.8858353866186889 0.791466542124078 0.7908234622357101 0.9135138566941633 1.0 10.124131672261543 -10.968185411794744 1.25519569502558 0.9994464603814232 0.8548037122792826 0.1499105635687623 0.08179268637277098 0.44720567265059163 1.2608339852307497 0.054679172701552044 0.012855964936205335 1.0760057402618049e-11 10.968185411794744 -0.1446427481021405 RLST(ph)SPDVIQGHQPR ddPTM_A549_MK2206_60min_R1 2 RLSTSPDVIQGHQPR 15 1 Q9Y385 Q9Y385 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 1 RLS(0.147)T(0.842)S(0.011)PDVIQGHQPR;RLS(0.132)T(0.86)S(0.009)PDVIQGHQPR 206.45 1.4740999999999998e-39 123878000.0 5514.27 5273.24 5218.8 5627.91 6085.96 4470.6 4810.05 4823.73 7527.700000000001 6419.3 7037.2 True False 6444.943965042231 5541.625392170879 5958.904314507471 7006.748202646479 5190.723346022462 4943.675924655896 5683.973822704313 5507.508499553567 5822.687969266755 4969.175671602526 5289.669023160482 1.218402122481284 1.0476317833700413 1.126517422624513 1.3246099466654482 0.9812945428712472 0.9345907849830156 1.074542433149861 1.0411820617583614 1.1007660297407047 0.9394114546383344 1.0 12.368961739783362 -6.7991246922429855 24.99981612969473 1.0376717905769561 1.1661172902359809 0.47537925485932275 0.08184893399377086 131.47950969866974 87220.95552119419 0.01147932605772832 0.021694231950163775 1.588090719261921e-07 6.7991246922429855 0.12844549965902474 RLST(ph)SPDVIQGHQPR ddPTM_A549_PD325901_60min_R1 1 RLSTSPDVIQGHQPR 15 1 Q9Y385 Q9Y385 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 1 RLS(0.136)T(0.704)S(0.16)PDVIQGHQPR 137.69 2.8954e-10 71390000.0 878.37 1001.4 1142.5 922.57 1426.6 1257.9 1400.3 1190.2 1091.9 1442.6 1789.1 True False 967.5414757781821 1085.791492413606 1220.0369204106155 979.5550535915095 1326.4005375028225 1247.656079455416 1453.5891827735609 1166.460527306163 1046.0112401845336 1351.5139898043442 1569.0520420393286 0.6166407804553435 0.6920047667777678 0.7775630684785374 0.6242973638518465 0.8453515256121606 0.7951655177949433 0.9264123456888668 0.743417360325468 0.6666517184637238 0.8613570191386094 1.0 10.61567748881444 -10.886284409183352 1.0308595307957995 1.0064143642570686 0.742923848309644 0.3283183562273021 0.0968877597457246 0.3680651617163177 0.6661694356044177 0.07332266919649565 0.01594332839602391 1.2993184064674638e-11 10.886284409183352 -0.2634905159474247 RLT(ph)KVK ddPTM_A549_MK2206_60min_R1 1 RLTKVK 6 2 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;Q9NZM1-7;Q9NZM1-8 Q9NZM1-5 MYOF Myoferlin 1 RLT(1)KVK 41.983999999999995 0.050651 4152600.0 640.27 761.55 680.57 680.04 910.18 902.63 515.92 711.34 1230.3 1199.6 1034.0 True False 748.3319229014157 800.3096421569534 777.0850596543943 846.6498305281559 776.2937277081553 998.1457074826981 609.6559858233506 812.1746233873854 951.6390143853884 928.6095268416173 777.2292630517727 0.9628200564182411 1.0296957155402977 0.9998144647863461 1.0893180053512204 0.9987963199687773 1.2842358811395007 0.7843965928785935 1.0449614573162114 1.2243993627424679 1.1947691253870878 1.0 9.60219640987568 -5.221079504162736 0.49294373543097497 1.090742777502766 0.8840933828751424 0.07648048628658444 0.12750608842521513 9.55428372137961 1.4865897574212914 0.026445717826893082 1.149677718287326 6.010636936258424e-06 5.221079504162736 -0.20664939462762366 RLT(ph)KVK ddPTM_A549_PD325901_60min_R1 2 RLTKVK 6 2 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;Q9NZM1-7;Q9NZM1-8 Q9NZM1-5 MYOF Myoferlin 1 RLT(1)KVK;RLT(1)KVK 61.998999999999995 0.021346 9660700.0 2740.0 2655.3999999999996 2966.4 2785.0 3023.8 3146.3 3093.4 3253.7 3549.3 3183.3 3456.8 True False 3018.1627829186095 2879.1798771271115 3167.7177424122992 2957.0231248060873 2811.4187195436957 3120.6775759524403 3211.1210297734306 3188.802401021729 3400.135264023228 2982.305894734623 3031.6355144606505 0.9955559527265804 0.9497117524166945 1.044887397347916 0.9753887334744997 0.9273603987463075 1.029370965298126 1.0592041868016946 1.0518422764911566 1.1215514687715142 0.9837283804432527 1.0 11.565880597178646 -7.4921306692248075 6.485589189462332 1.0579636771878922 0.98008072654834 0.314028436175523 0.043821968416974 0.16819512480962676 23.579856918910405 0.007519681561301034 0.011849966259039434 3.2200997915214164e-08 7.4921306692248075 -0.0778829506395522 RLT(ph)PQAVK ddPTM_A549_PD325901_60min_R1 1 RLTPQAVK 8 1 P05198;H0YJS4;G3V4T5 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 1 RLT(1)PQAVK 75.294 0.0030048 3398100.0 1194.6 1226.8 929.51 1031.7 1308.8 1434.7 1156.1 1129.9 1214.6 1302.0 1423.9 True False 1315.8749125819604 1330.186741454975 992.5921381976998 1095.4257658392974 1216.8744031148835 1423.0162788732684 1200.096018142195 1107.3632581105971 1163.554585885276 1219.7914977992893 1248.7693268457886 1.0537373751048729 1.0651981217498632 0.7948562771835889 0.8772042540524158 0.9744589148330004 1.139534939144928 0.9610229786580878 0.886763659472352 0.9317610233302633 0.9767948904384983 1.0 10.286291291031178 RLT(ph)VNEAVK ddPTM_A549_MK2206_60min_R1 2 RLTVNEAVK 9 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RLT(1)VNEAVK;RLT(1)VNEAVK 149.57 1.496e-05 101377000.0 9808.7 10454.7 9712.6 8277.8 15177.199999999999 10852.099999999999 9331.9 10583.4 16028.7 14449.7 15516.699999999999 True False 11464.16876030912 10986.799574365832 11089.992727271652 10305.861371604567 12944.653985115263 12000.462018959028 11027.38543592985 12083.62936030317 12398.225042574233 11185.502734247515 11663.475150866003 0.9829119205057778 0.9419833653565998 0.9508309130703837 0.8836012627711018 1.1098453777864081 1.0288924924805112 0.9454631054031161 1.0360230723692991 1.0629957951814795 0.9590197252160306 1.0 13.509710085407246 -6.751851139208062 24.999997836420206 1.028941831437451 0.9407712020788874 0.38414008341366523 0.04823952367814581 140.03049930902355 365107.18530547677 0.006449382803315391 0.013290577987556559 1.7707157930728782e-07 6.751851139208062 -0.08817062935856357 RLT(ph)VNEAVK ddPTM_A549_PD325901_60min_R1 2 RLTVNEAVK 9 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 RLT(1)VNEAVK;RLT(1)VNEAVK 146.79 1.8179e-05 166810000.0 7472.4 6989.299999999999 7727.200000000001 8352.9 9705.1 7804.4 8994.900000000001 9043.5 8937.599999999999 7824.0 9327.3 True False 8230.992547109865 7578.31283995048 8251.614259428368 8868.839662187718 9023.447256777403 7740.84355394057 9337.205841698147 8863.120298011492 8561.98375334122 7329.991304747804 8180.101230626254 1.0062213553413097 0.9264326475053046 1.0087423158694382 1.0841968103014217 1.1030972603362983 0.9463016820572947 1.1414535808847572 1.0834976301794432 1.046684327240988 0.8960758672893139 1.0 12.997902981621142 -5.993469934898538 21.130150999237433 1.0393663463355214 0.9666419120683789 0.13689112287776728 0.06903263137925002 28.181496658966935 91173.06512375466 0.007504100873496966 0.02318308249181873 1.0151496403657087e-06 5.993469934898538 -0.07272443426714248 RLT(ph)VQTK ddPTM_A549_MK2206_60min_R1 1 RLTVQTK 7 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RLT(1)VQTK 63.076 0.016549 4849900.0 1171.0 962.61 1304.2 1063.5 1381.7 1114.2 877.86 1083.8 1506.1 1219.2 1529.8 True False 1368.6361717987074 1011.6027373602583 1489.1551711084242 1324.0575477423292 1178.4537603269216 1232.103904453898 1037.3557987961053 1237.4319689982965 1164.970754747487 943.7818732288257 1149.9084396678936 1.1902131722713374 0.8797245958577541 1.2950206466338388 1.1514460648055873 1.0248239943932165 1.0714800082776532 0.9021203454213322 1.0761134767874916 1.0130987081753602 0.8207452355958014 1.0 10.167303277226655 -6.843026557669037 5.532003725901478 1.009201618948585 1.1228707730142442 0.24268858464441978 0.11664223753092735 0.2293315847121643 11.720204684733163 0.013572142234641947 0.026111615158283637 1.4354016540029005e-07 6.843026557669037 0.11366915406565914 RLT(ph)VQTK ddPTM_A549_PD325901_60min_R1 2 RLTVQTK 7 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RLT(1)VQTK;RLT(1)VQTK 105.2 0.006100899999999999 19813500.0 3548.0 3566.3 4170.8 3919.6000000000004 4593.1 4172.2 3953.1000000000004 4328.4 3867.3 4806.0 4766.7 True False 3908.1903481004474 3866.8446169309386 4453.855569057852 4161.70478994253 4270.496501334794 4138.222986488501 4103.537383719322 4242.0666664358905 3704.7708298980156 4502.54833980291 4180.426118600899 0.9348784638749785 0.9249881488696398 1.0654070763839893 0.99552166977068 1.0215457420316854 0.9899045860601114 0.981607440796655 1.0147450394017778 0.886218467876649 1.0770548771974993 1.0 12.029434291049467 -8.721635512246229 24.999666814155145 0.9462697025990117 0.9921589710231375 0.0 0.058974246141780755 233.66907855606726 146760.68086280566 0.009050044287317083 0.010261713837350323 1.8982984265119284e-09 8.721635512246229 0.045889268424125884 RLT(ph)VSSLQESGLK ddPTM_A549_MK2206_60min_R1 2 RLTVSSLQESGLK 13 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 RLT(1)VSSLQESGLK;RLT(1)VSSLQESGLK 166.77 8.5411e-20 20326000.0 5286.1 5844.0 5933.4 5062.8 7481.400000000001 5718.4 5583.5 5286.4 7981.6 8092.4 8201.099999999999 True False 6178.264447263144 6141.434638257807 6774.845339867142 6303.186227277731 6380.895970550653 6323.517292433294 6597.949676005348 6035.763388921015 6173.7803439961135 6264.32121958411 6164.5405311546365 1.0022262674791655 0.9962518061516417 1.0990024813087236 1.022490840221165 1.035096766466631 1.025788906809066 1.0703068043206674 0.9791100177567489 1.001498864805054 1.016186232846584 1.0 12.589777653235474 -8.275895248011368 24.99092410311109 0.9991077408666822 1.0358508636099804 0.2789671261497262 0.02836841725896629 753.198879226946 1302108.664225418 0.00439096252508112 0.005320477247184934 5.297912143174854e-09 8.275895248011368 0.03674312274329816 RLTVSSLQESGLK ddPTM_A549_PD325901_60min_R1 1 RLTVSSLQESGLK 13 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 68.513 0.0038441 1909100.0 1093.1 1036.2 1380.8 1255.1 1612.1 1670.9 1159.6 1023.4 1520.9 1383.3 1012.9 False True 1204.0707073023113 1123.5242105442167 1474.5093914249253 1332.6246764610842 1498.871657443081 1657.29274438513 1203.7292125574672 1002.9874841582312 1456.9818620722185 1295.9582019245456 888.3197213021275 1.3554474570679866 1.2647745891505358 1.65988591276972 1.500163335907572 1.6873110227092414 1.8656489376998375 1.3550630293257504 1.129083887373366 1.6401548081545774 1.458887122335738 1.0 9.794935210178242 -10.92581757532992 0.8648523897774139 0.9557383807711383 1.5083909471097245 0.032008400650823665 0.24273114008915808 0.5706860352206361 0.6510210507224654 0.22300269770041878 0.0380580825215635 1.1862669329682797e-11 10.92581757532992 0.5526525663385863 RLWTLTEHQK ddPTM_A549_MK2206_60min_R1 1 RLWTLTEHQK 10 1 A0A0B4J1Y0;A0A087X1P4;Q8N3P8;Q9HCZ1 A0A0B4J1Y0 ZNF334;DKFZp572F2170 Zinc finger protein 334 0 34.532 0.051057 2048400.0 1057.2 858.75 931.19 776.54 1317.5 1067.2 651.98 750.27 1251.6 1403.6 1142.9 False True 1235.6295139415818 902.4567069821863 1063.2467441990912 966.7923348602048 1123.697495281697 1180.1303956499737 770.4363266341841 856.6230701055108 968.1145983944997 1086.5257851574634 859.0863875646723 1.4383064751431218 1.0504842353985606 1.2376482267553675 1.125372661998354 1.3080145507451713 1.3737039868544454 0.8968089097747289 0.9971326312524349 1.1269118128374718 1.2647456657269747 1.0 9.746659402214892 -7.758611462675781 24.999989322849604 1.0446220453077353 1.241914084521204 0.35482273223330807 0.13207247933400637 56.55096093802687 499931.13199643994 0.01763520029404307 0.025515835670262173 1.7433658611923375e-08 7.758611462675781 0.19729203921346872 RLWTLTEHQK ddPTM_A549_PD325901_60min_R1 2 RLWTLTEHQK 10 1 A0A0B4J1Y0;A0A087X1P4;Q8N3P8;Q9HCZ1 A0A0B4J1Y0 ZNF334;DKFZp572F2170 Zinc finger protein 334 0 ; 45.973 0.01267 5973100.0 2561.87 2803.2 1794.73 2018.12 3897.8999999999996 2855.4 2224.83 1952.53 3904.9 3501.4 2517.8 False True 2821.9491564509863 3039.4355018312576 1916.5311703882235 2142.774688916936 3624.12495102499 2832.146569104853 2309.49712312369 1913.585257419847 3740.7906326555367 3280.321006447339 2208.1265616492196 1.2779834296922323 1.3764770347045436 0.8679444392701804 0.9704039279870476 1.641266861224739 1.2826015583950774 1.045907948953233 0.8666103160276358 1.6941015508918977 1.485567477616551 1.0 11.108607149092892 RMEDEGGFPVPQENGQPES(ph)PR ddPTM_A549_MK2206_60min_R1 4 RMEDEGGFPVPQENGQPESPR 21 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR 94.837 6.1701e-07 83282000.0 5213.96 6121.499999999999 5295.0 5397.97 7090.3 5695.599999999999 5360.1 5261.5 8203.9 7662.400000000001 8541.5 True False 6093.948978916813 6433.058202959477 6045.910620318285 6720.4728923240855 6047.326262463616 6298.3046115667075 6333.960787741785 6007.3337376679665 6345.729748936269 5931.458518232081 6420.409816592569 0.9491526480393716 1.0019700278842358 0.9416705152829266 1.046735813492162 0.94189100621509 0.9809817116797904 0.9865352786939908 0.935662038604285 0.9883683332077494 0.9238442229813947 1.0 12.648449672585343 -8.98448898097112 21.591529672186006 0.9948685337789568 0.9743003971929386 0.0 0.03755967957933413 36.543750042045694 50872.81942035063 0.004981583783029951 0.005038239412624589 1.0363608989069807e-09 8.98448898097112 -0.020568136586018193 RMEDEGGFPVPQENGQPES(ph)PR ddPTM_A549_PD325901_60min_R1 4 RMEDEGGFPVPQENGQPESPR 21 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR 143.44 3.785e-22 98083000.0 9927.7 9655.2 9699.8 10031.0 10336.099999999999 10765.3 9151.4 10223.5 11980.599999999999 11044.199999999999 13386.7 True False 10935.552795613537 10468.877588927351 10358.086757635792 10650.5920879461 9610.127993609229 10677.630966023835 9499.661534838231 10019.584272319405 11477.097045658766 10346.867327185031 11740.220765283038 0.9314605759332072 0.8917104540218552 0.8822735930371642 0.9071883996799212 0.8185645045131775 0.9094914976044246 0.8091552726955223 0.8534408741229363 0.9775878388588437 0.8813179525364389 1.0 13.51917191695691 -8.811497753009494 6.212542197271711 0.9899130562171589 0.8742962934678308 0.2604839230986771 0.04837293327762823 0.07852853135451267 6.781396707746745 0.00612871318098882 0.0065376833444938266 1.5434844091175502e-09 8.811497753009494 -0.11561676274932808 RMEDEGGFPVPQENGQPES(ph)PRR ddPTM_A549_MK2206_60min_R1 2 RMEDEGGFPVPQENGQPESPRR 22 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PRR;RMEDEGGFPVPQENGQPES(1)PRR 115.89 2.4331e-15 84141000.0 2180.0299999999997 2013.37 1851.72 1430.23 2799.3999999999996 2235.28 1697.61 2342.7 2806.3 2814.6000000000004 2826.0 True False 2547.9657673837182 2115.841933201425 2114.3217401049637 1780.6364142054651 2387.611968342757 2471.8158459412225 2006.0437627802355 2674.784899217855 2170.67753074024 2178.779905175405 2124.2262063678063 1.1994794903413135 0.9960530224411847 0.9953373768607355 0.8382517873414989 1.123991390928799 1.1636311794532261 0.9443644734099906 1.259180821326672 1.0218674095221998 1.025681680531039 1.0 11.052721689894685 -5.25500658683584 23.790944706636893 1.0262625079329524 1.1994796480730443 0.15262766783959503 0.10757902003576353 484.0083210349716 1789947.3039950808 0.013925393720547834 0.17758986140188912 5.55895826073438e-06 5.25500658683584 0.17321714014009193 RMEDEGGFPVPQENGQPES(ph)PRR ddPTM_A549_PD325901_60min_R1 2 RMEDEGGFPVPQENGQPESPRR 22 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PRR;RMEDEGGFPVPQENGQPES(1)PRR 93.679 4.5993e-07 78699000.0 5731.0 5090.3 5659.5 5466.6 5950.9 4942.9 5239.5 5218.5 6649.5 5621.2 6665.0 True False 6312.806901060787 5519.277445409406 6043.587703338187 5804.259466450616 5532.9293134905 4902.646661213272 5438.892039664409 5114.412923665947 6370.044639259133 5266.276472680009 5845.247252916063 1.0799897126526972 0.9442333585899145 1.0339319179908388 0.9929878438512589 0.946568908736965 0.838740680946807 0.9304810907615699 0.8749694756050707 1.0897818969216846 0.9009501642642714 1.0 12.513048336452611 -8.774304323633048 24.9996802961051 1.042397004193237 0.9537550851975592 0.0 0.07866629904291829 238.07988186321458 462644.9091748268 0.012379190905670604 0.01321922567259887 1.6814953721107131e-09 8.774304323633048 -0.08864191899567786 RMEELHNQEVQKR ddPTM_A549_PD325901_60min_R1 1 RMEELHNQEVQKR 13 2 Q15233;Q15233-2;H7C367;C9JYS8 Q15233 NONO Non-POU domain-containing octamer-binding protein 0 40.475 0.027070999999999998 2753300.0 551.84 519.68 460.15 371.04 658.86 452.2 571.56 469.15 571.87 604.3 939.13 False True 607.8623905568633 563.4752574171185 491.378546106735 393.9582981070202 612.5839465436067 448.5174331264321 593.3110285696329 459.792435208945 547.8362926314945 566.144394869517 823.6229636355683 0.7380347773132592 0.6841422377660193 0.5966061751577839 0.47832359647676903 0.7437674440736685 0.5445664496126037 0.7203672733342553 0.5582559684583918 0.6651542232543892 0.6873829651015183 1.0 9.68584024444293 -10.447249519102243 0.640898779989704 1.0222065021271791 0.6276627405668155 0.14581667932138087 0.12216191919563031 0.33221013540062894 0.2296104002771076 0.06996962548630652 0.01692130188008368 3.570676299408893e-11 10.447249519102243 -0.39454376156036364 RMHS(ph)QPR ddPTM_A549_MK2206_60min_R1 3 RMHSQPR 7 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 RMHS(1)QPR;RMHS(1)QPR;RMHS(1)QPR 93.649 0.0050701999999999995 105453000.0 2929.8900000000003 2901.83 2973.9799999999996 2402.6400000000003 4266.09 3053.3700000000003 2987.21 2694.56 4770.39 4786.12 4857.67 True False 3424.3838030668753 3049.52075228194 3395.7350834021086 2991.286907858609 3638.553812255251 3376.4755867370313 3529.947389927453 3076.5221317439127 3689.9042817474715 3704.9321678952997 3651.3764741283417 0.9378336710361661 0.8351701814067045 0.9299876656002009 0.819221717906448 0.9964882662842507 0.924713080302974 0.9667442990167492 0.8425650308979278 1.0105515845578008 1.0146672615509313 1.0 11.834224709763838 -8.411556389699292 0.5797192859888969 1.0099945703017215 0.8921325140844624 0.31383504146209185 0.05756222000710758 0.5321655338577368 0.3873482455388912 0.016254941380930463 0.020462998929396535 3.8765341151686976e-09 8.411556389699292 -0.11786205621725909 RMHS(ph)QPR ddPTM_A549_PD325901_60min_R1 2 RMHSQPR 7 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 RMHS(1)QPR;RMHS(1)QPR 93.649 0.0050701999999999995 66259000.0 3334.9 3176.3999999999996 3118.5 2766.5 3650.2 3135.6000000000004 2548.8 3244.5 3170.4 3527.7 4366.3 True False 3673.4565929763753 3444.086375576768 3330.1401630638998 2937.3804218226383 3393.8225445063817 3110.0647132048675 2645.795978756876 3179.785902238988 3037.1591133629836 3304.960419958953 3829.2727802561717 0.9593091962308905 0.8994100376798868 0.8696534183289808 0.7670857080142859 0.8862838296621274 0.8121815529153318 0.6909395414185868 0.8303889758478543 0.793142533230501 0.863077824332446 1.0 11.902854719649202 -10.786247564415861 1.017756233662076 1.0006339920411316 0.8300665308405694 0.10437152005067962 0.07863489866097727 0.40636701032647227 0.7427249034851607 0.04993310410354198 0.012366918121512242 1.6358837394789224e-11 10.786247564415861 -0.1705674612005622 RMNS(ph)TGGQTPR ddPTM_A549_MK2206_60min_R1 6 RMNSTGGQTPR 11 1 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 RMNS(0.828)T(0.164)GGQT(0.008)PR;RMNS(0.786)T(0.209)GGQT(0.005)PR;RMNS(0.974)T(0.026)GGQTPR;RMNS(0.595)T(0.402)GGQT(0.003)PR;RMNS(0.901)T(0.086)GGQT(0.012)PR;RMNS(0.808)T(0.141)GGQT(0.052)PR 59.607 0.0024237 128091500.0 5341.0 5366.410000000001 4386.57 4106.95 6534.150000000001 4140.46 3417.84 4371.49 7044.6 8646.09 9062.27 True False 6242.430225087012 5639.537347209633 5008.651586358748 5113.15293436799 5572.985190736168 4578.600728985088 4038.8172867624476 4991.162094626651 5449.009347914584 6692.932264029709 6811.858253071752 0.9164063597876598 0.827899985245073 0.735284176546119 0.750625269112471 0.8181299410073714 0.6721514980028255 0.5929097665737797 0.7327166698420254 0.799929937687326 0.9825413294546441 1.0 12.733832699167957 -10.11711631881483 0.8240356863196365 0.9867433551527873 0.7548705098497652 0.543081568969344 0.08108651682015353 0.34254075449436094 0.4611018436964743 0.0415319377237598 0.0175095533850593 7.636312298025111e-11 10.11711631881483 -0.2318728453030221 RMPS(ph)SGDK ddPTM_A549_MK2206_60min_R1 1 RMPSSGDK 8 1 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 RMPS(0.982)S(0.018)GDK 46.592 0.016446000000000002 16301000.0 2904.6 3108.6 2786.3 2249.5 3787.9 2904.1 2856.6 3325.1 4206.2 4183.6 4149.5 True False 3394.825469348011 3266.8144620958647 3181.439237279101 2800.6276009838916 3230.704927800789 3211.4099344144365 3375.607243570679 3796.443107691672 3253.502415921176 3238.5218543636124 3119.0646296260447 1.0884113901015986 1.047369916950882 1.0199978567486543 0.8979062422697116 1.035792877491009 1.029606730143153 1.0822498551353814 1.217173594811609 1.0431019559576262 1.0382990540186048 1.0 11.606897731530923 -6.976828140967647 24.990275142125167 1.0425550052664394 1.0101327315889725 0.05741243727757117 0.07024023287138531 750.2622264266646 809135.3825677059 0.01110722693115798 0.020989707442546288 1.0548042209888019e-07 6.976828140967647 -0.03242227367746686 RMPS(ph)SGDK ddPTM_A549_PD325901_60min_R1 1 RMPSSGDK 8 1 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 RMPS(0.786)S(0.214)GDK 83.775 0.001375 16805000.0 6569.8 7398.4 7425.3 6338.7 7519.0 7155.5 6941.6 7236.1 7300.5 8499.0 8433.7 True False 7236.761259568859 8021.889132687058 7929.225509956184 6730.227102767814 6990.891379141822 7097.227980398462 7205.766386589269 7091.7703088893695 6993.6853731726205 7962.371689551582 7396.408365629137 0.9784155906261 1.0845654723398601 1.0720372805269962 0.9099317898729004 0.945173797005079 0.9595505858463743 0.9742250603785244 0.9588127045343507 0.9455515471092758 1.0765186690546262 1.0 12.85260916473193 -6.246740889511364 24.973364991674188 0.9660852102801841 1.0489620544366518 0.3235381024069005 0.04699769002513125 489.36081951217886 831443.5220517938 0.004907464794956568 0.012919381970269192 5.665772217580682e-07 6.246740889511364 0.08287684415646768 RMS(ph)ADMSEIEAR ddPTM_A549_MK2206_60min_R1 3 RMSADMSEIEAR 12 1 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR;RMS(0.994)ADMS(0.006)EIEAR 112.96 1.7437e-05 18074000.0 1403.01 1401.9099999999999 1347.17 1501.6399999999999 2054.81 1321.56 1456.8400000000001 1604.97 2253.8199999999997 2026.89 2123.05 True False 1639.8037876988076 1473.2612309582487 1538.2189632434718 1869.5418674111806 1752.5501709903472 1461.406602019471 1721.5289703575963 1832.4794125144822 1743.3333686109697 1569.014141263759 1595.8380918008374 1.0275502233740748 0.9231896634925754 0.963894126319328 1.1715109928861767 1.0982004878782325 0.9157611975349792 1.0787616733818666 1.1482865473192239 1.0924249631387668 0.9831913082693692 1.0 10.640098572810736 RMS(ph)ADMSEIEAR ddPTM_A549_PD325901_60min_R1 4 RMSADMSEIEAR 12 1 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR;RMS(0.985)ADMS(0.015)EIEAR;RMS(0.995)ADMS(0.005)EIEAR 162.29 1.7533e-14 27208700.0 3197.28 2952.99 2835.01 3236.89 3675.71 2696.0 2684.14 2870.05 3179.98 3199.5199999999995 4250.5 True False 3521.8655118868664 3201.848830819307 3027.410826900044 3436.8253437894364 3417.5408101111034 2674.0446698559517 2786.2864165177652 2812.8046012393324 3046.3364992783327 2997.5017611665007 3727.71544613949 0.9447785279678989 0.8589305908891778 0.8121357090266378 0.9219655827937977 0.9167922979878707 0.7173414141965304 0.7474514771247653 0.7545652670866655 0.8172127254061708 0.8041122785460421 1.0 11.864076021233775 -10.60031170051652 0.9614941768140388 0.9966458308429429 0.8304768131293497 0.0 0.09077814870527198 0.42830387139519 0.7268695573823956 0.04649827897151121 0.01378885571469932 2.5100842548127634e-11 10.60031170051652 -0.16616901771359316 RMS(ph)DEFVDSFKK ddPTM_A549_PD325901_60min_R1 1 RMSDEFVDSFKK 12 2 Q92934;F5H3B1;F5H1R6 Q92934 BAD Bcl2-associated agonist of cell death 1 RMS(1)DEFVDSFKK 54.7 0.0077343 6565500.0 926.05 1005.6 1028.9 1238.1 1188.7 990.38 1274.9 1175.6 1145.8 1245.2 1244.9 True False 1020.0619142780216 1090.3454411535074 1098.7273412783215 1314.5746250708867 1105.2098127923764 982.3146736394426 1323.4170171520486 1152.1517357596413 1097.6460106268323 1166.5778594928383 1091.7851920712988 0.9343064200594202 0.9986812873738836 1.006358530283647 1.2040597679997098 1.0122960274773547 0.8997325488320901 1.212158789808557 1.055291594103614 1.005368105922388 1.0685049293255622 1.0 10.09247331965794 -8.793344143145129 10.538364009143883 1.0025169094659852 1.043394378972609 0.0 0.09326504566994383 1.354744551097311 438.04453331024155 0.015523604799227774 0.016562864411668748 1.6093698347256215e-09 8.793344143145129 0.040877469506623854 RMS(ph)GEPIQTVESIR ddPTM_A549_MK2206_60min_R1 3 RMSGEPIQTVESIR 14 1 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 RMS(1)GEPIQTVESIR;RMS(1)GEPIQTVESIR;RMS(1)GEPIQTVESIR 69.188 0.00077687 31651800.0 1751.62 1523.38 1680.7400000000002 1836.39 2150.75 1501.67 1510.7099999999998 1734.19 2038.33 2195.63 2003.7 True False 2047.250633002605 1600.9135351179307 1919.0942050979709 2286.305632438679 1834.3775240812968 1660.5757226721275 1785.1864520530205 1980.0167432341352 1576.651509544152 1699.6356580687386 1506.1259906932673 1.3592824542256645 1.0629346714752812 1.2741923431084374 1.5180042350814862 1.2179442725352185 1.1025476838811918 1.1852836104576498 1.3146421716836165 1.046825776387022 1.1284817263437563 1.0 10.556626744277239 -8.832631398117611 6.220375695228963 1.0208666438052496 1.2486541514628917 0.3278668064754007 0.12173591663621308 0.1426840700375717 9.56324408051414 0.020792701249678077 0.022107702796381575 1.4701735392430155e-09 8.832631398117611 0.2277875076576421 RMS(ph)GEPIQTVESIR ddPTM_A549_PD325901_60min_R1 4 RMSGEPIQTVESIR 14 1 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 RMS(1)GEPIQTVESIR;RMS(0.999)GEPIQT(0.001)VESIR;RMS(1)GEPIQTVESIR;RMS(1)GEPIQTVESIR 94.85600000000001 2.1841e-05 38893300.0 4118.79 4271.43 3574.0299999999997 4131.43 4558.1900000000005 4128.03 3934.47 4026.0699999999997 4920.379999999999 4204.62 5099.48 True False 4536.926528707057 4631.398396684889 3816.585168188319 4386.619047941695 4238.038459301831 4094.4126923239837 4084.1984088745953 3945.766875459185 4713.593539682363 3939.139575635062 4472.276288267125 1.014455779623799 1.0355796686432848 0.8533876089455853 0.9808470597958919 0.9476244726695867 0.9155097825833224 0.9132258710378338 0.8822726104401867 1.0539584846419991 0.8807907476488583 1.0 12.12679360240496 -8.7754422590057 24.99994641397772 1.0254803980415403 0.9424960960859964 0.0 0.06801564356969211 196.89804427493087 351529.4170202205 0.009348432447185967 0.009975769168652388 1.6770952967045003e-09 8.7754422590057 -0.08298430195554396 RMS(ph)PKPELTEEQK ddPTM_A549_MK2206_60min_R1 4 RMSPKPELTEEQK 13 2 P41208 P41208 CETN2 Centrin-2 1 RMS(1)PKPELTEEQK;RMS(0.997)PKPELT(0.003)EEQK;RMS(1)PKPELTEEQK;RMS(1)PKPELTEEQK 150.59 1.4921e-13 53203000.0 8081.3 7541.7 6860.800000000001 6440.5 9511.800000000001 8029.0 8516.1 8707.7 10589.9 10496.4 9826.7 True False 9445.225871184359 7925.5403167948225 7833.7646050764315 8018.42278912503 8112.62682020527 8878.623450781146 10063.365135816091 9942.043141212833 8191.30455859532 8125.255949933603 7386.4591868770385 1.2787217301579321 1.0729823473303053 1.0605574886264972 1.0855570424555725 1.0983106539894458 1.202013471699014 1.3624071941932487 1.3459822750900874 1.1089622715506489 1.100020421742684 1.0 12.850667236623222 -9.470955122965522 1.6463287983102282 1.0300479456623424 1.1786804142561955 0.18420009492517464 0.10541977284157168 0.34723682730394534 1.917262398402741 0.026259561259678647 0.021529172606100114 3.3809977132908637e-10 9.470955122965522 0.14863246859385315 RMS(ph)PKPELTEEQK ddPTM_A549_PD325901_60min_R1 3 RMSPKPELTEEQK 13 2 P41208 P41208 CETN2 Centrin-2 1 RMS(1)PKPELTEEQK;RMS(0.999)PKPELT(0.001)EEQK;RMS(1)PKPELTEEQK 88.552 7.357199999999999e-05 37190800.0 5960.0 5594.9 4856.3 5163.3 5768.400000000001 5783.2 5407.2 5199.0 5570.1 6028.9 6752.0 True False 6565.054812479895 6066.401858303255 5185.877721304222 5482.225314294897 5363.247483899679 5736.103536613851 5612.973954933376 5095.301866463402 5336.008067544524 5648.234225101489 5921.546804454501 1.1086722826443445 1.0244623674577369 0.875764034728752 0.925809673609415 0.905717316945829 0.9686833062433704 0.9478898234344783 0.8604680558516308 0.9011172661052845 0.9538443943147739 1.0 12.53175836518346 -5.5297829835335115 4.584757658473825 0.9380507573562717 1.093946815264931 0.6542324505633148 0.04043201906780459 0.10228210524272996 5.472315751370252 0.006828639296712359 0.033971368295653476 2.95268431113191e-06 5.5297829835335115 0.15589605790865924 RMS(ph)PKPELTEEQKQEIR ddPTM_A549_MK2206_60min_R1 7 RMSPKPELTEEQKQEIR 17 3 P41208 P41208 CETN2 Centrin-2 1 RMS(0.992)PKPELT(0.008)EEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(0.999)PKPELT(0.001)EEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(0.996)PKPELT(0.004)EEQKQEIR;RMS(1)PKPELTEEQKQEIR 102.48 2.6833e-09 188423000.0 18675.1 19778.1 17746.2 15962.599999999999 25803.800000000003 19749.5 18840.100000000002 17864.699999999997 26427.9 25737.6 26089.800000000003 True False 21827.000317641352 20784.720810904648 20262.878007609517 19873.437716588334 22008.09520208716 21839.378981342914 22263.102299795537 20397.07593334922 20442.022846684224 19923.458284460485 19610.982618151018 1.112998810036132 1.0598510648654225 1.033241342473841 1.0133830672102273 1.1222331705968411 1.1136300208195278 1.135236450578965 1.0400843410299405 1.0423762666417353 1.0159337077796526 1.0 14.25937420385145 -9.15427776801585 1.0903547473650186 1.0115246625303935 1.0794785057306864 0.356009616266205 0.037702683046331134 0.3651502847901296 0.902676576711665 0.009816322889361987 0.008646617594291545 7.010068019298331e-10 9.15427776801585 0.06795384320029285 RMS(ph)PKPELTEEQKQEIR ddPTM_A549_PD325901_60min_R1 10 RMSPKPELTEEQKQEIR 17 3 P41208 P41208 CETN2 Centrin-2 1 RMS(1)PKPELTEEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(0.997)PKPELT(0.003)EEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(1)PKPELTEEQKQEIR;RMS(1)PKPELTEEQKQEIR 122.01 1.1909999999999998e-10 319141200.0 22507.4 22367.22 21961.6 21992.0 26201.899999999998 23310.97 23052.100000000002 26066.0 26382.899999999998 25592.64 27054.4 True False 24792.334678927848 24252.184127165416 23452.04624182912 23350.39589254418 24361.568935647836 23121.13318904747 23929.360280093144 25546.093181618584 25274.118462006143 23976.716342732736 23726.880311971843 1.0449049497003788 1.0221396074109466 0.9884167633279606 0.9841325781359591 1.0267497713703115 0.9744700055397197 1.0085337796397589 1.0766730748301885 1.06521034917741 1.0105296620320892 1.0 14.534234802275932 -8.036820447507075 24.946271159480233 1.0354526769969512 1.0052868020307353 0.22211913750614953 0.02773041864358323 785.1076822014016 531918.0799331453 0.005251480723817193 0.006780556694035672 9.18712345718297e-09 8.036820447507075 -0.030165874966215922 RMSSEGPPRMS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RMSSEGPPRMSPK 13 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RMS(0.006)S(0.006)EGPPRMS(0.988)PK 43.408 0.027923000000000003 6290400.0 1370.6 1306.9 1036.4 981.58 1629.2 964.24 775.41 914.69 1649.6 1847.8 2045.1 True False 1601.923772047231 1373.4156277787704 1183.377104230004 1222.0671440648002 1389.5468381881903 1066.2752367892895 916.2919599303859 1044.350108620642 1275.9682338698992 1430.3806966471655 1537.245228111393 1.042074317586466 0.8934265025926292 0.7698037259051119 0.7949721499972975 0.9039200856036093 0.693627286844324 0.5960610208275688 0.6793646774911084 0.8300355795786143 0.930483094362558 1.0 10.586131613099798 -10.112082896735288 0.9989182995396992 0.981853037365422 0.7954180588365256 0.22052585170900962 0.1173460567831514 0.48119100247004537 0.9609666711245036 0.048464359431357844 0.023581312203298573 7.725331123833013e-11 10.112082896735288 -0.18643497852889634 RMTGS(ph)EFDFEEMKR ddPTM_A549_PD325901_60min_R1 2 RMTGSEFDFEEMKR 14 2 P50395-2;P50395 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 1 RMT(0.033)GS(0.967)EFDFEEMKR;RMT(0.074)GS(0.926)EFDFEEMKR 51.135 0.0056647 176336000.0 26691.0 23474.4 25951.8 27249.0 37748.0 42660.0 29371.0 28872.0 49229.0 27771.0 30019.0 True False 29400.6506711243 25452.670071413966 27713.04520885094 28932.108843030925 35096.71070353044 42312.59110387792 30488.72947742791 28296.12531035415 47160.076328458956 26017.5343205715 26326.853306119607 1.1167552129859057 0.9667949973154429 1.0526531555675558 1.0989581058783706 1.3331145312141162 1.6072027527134234 1.1580848315943968 1.0748008879502813 1.7913297795257863 0.9882508182063594 1.0 14.684247474387712 -6.7251571893643165 3.9544826965213202 1.358573653474299 1.0440977110578407 0.11196935489506066 0.2425440789165618 0.2920757759814753 9.722682957097636 0.043543978602580365 0.09148049808684358 1.8829674413497545e-07 6.7251571893643165 -0.31447594241645827 RMYS(ph)FDDVLEEGK ddPTM_A549_MK2206_60min_R1 2 RMYSFDDVLEEGK 13 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10 E9PMS6 LMO7 LIM domain only protein 7 1 RMY(0.003)S(0.997)FDDVLEEGK;RMY(0.002)S(0.998)FDDVLEEGK 85.619 7.5696e-05 14873600.0 1796.8899999999999 1810.2600000000002 1485.0 1538.37 2216.1000000000004 1892.66 1823.34 1528.45 2151.8999999999996 2109.75 2418.7 True False 2100.1611022573684 1902.3945017543779 1695.5953297776496 1915.2707190600543 1890.1146256499187 2092.9400249539717 2154.617276304754 1745.112468181812 1664.498085878175 1633.156009714989 1818.0700372759409 1.1551596248756684 1.0463813069626198 0.9326347692953577 1.0534636619003697 1.039626959851296 1.1511877881722727 1.1851123620809845 0.9598708698794447 0.9155302335723731 0.8982910318251474 1.0 10.828192062018326 -8.389650384518047 15.704516391058608 0.958932909295983 1.0736135672132476 0.4605049710857133 0.07040466243925385 1.0825741246462826 130.31721659115078 0.01223018660996978 0.014785486565311956 4.077083588678023e-09 8.389650384518047 0.11468065791726467 RMYS(ph)FDDVLEEGK ddPTM_A549_PD325901_60min_R1 5 RMYSFDDVLEEGK 13 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10 E9PMS6 LMO7 LIM domain only protein 7 1 RMY(0.005)S(0.995)FDDVLEEGK;RMY(0.005)S(0.995)FDDVLEEGK;RMY(0.002)S(0.998)FDDVLEEGK;RMY(0.289)S(0.711)FDDVLEEGK;RMYS(1)FDDVLEEGK 99.45100000000001 4.1608e-05 18533200.0 3879.6299999999997 3687.0299999999997 3367.2799999999997 4125.93 4228.63 3825.3100000000004 3382.96 4087.16 5545.15 7322.4 8515.6 True False 4273.487181567347 3997.74895773291 3595.803869899569 4380.779325433101 3931.62561678155 3794.1579436374877 3511.700394026741 4005.6383874850058 5312.106629278563 6860.0624143514 7468.235184836009 0.5722218269511 0.535300356615737 0.4814797312758339 0.5865882925497741 0.5264464119668565 0.5080394296287553 0.4702182385949931 0.5363567547549004 0.7112934311528659 0.9185653965853294 1.0 12.86655164536145 -9.596880354714225 0.665743015516806 0.9761290626538719 0.5171669382062212 0.9161029915942961 0.04957937534565527 0.1213800806333755 0.1165433358764642 0.023725894795950872 0.013200574662352199 2.5299948974724163e-10 9.596880354714225 -0.4589621244476507 down RNADCSKLR ddPTM_A549_MK2206_60min_R1 1 RNADCSKLR 9 2 A0A3B3ITD2;Q8N5G2;Q8N5G2-2;Q8N5G2-3 A0A3B3ITD2 TMEM57 Macoilin 0 35.944 0.048397 4360300.0 573.03 475.69 528.14 331.73 685.83 451.74 520.15 369.99 595.65 646.23 638.45 False True 669.7434547615823 499.9005891637331 603.0381935816615 413.0038648919257 584.9453155135071 499.54282695925656 614.6545220693439 422.43721554685357 460.73622605759283 500.24619417377295 479.90524467640694 1.3955743601284885 1.0416651926794607 1.2565776270861164 0.8605946058589298 1.2188766886845073 1.040919707589549 1.280783089761389 0.8802513000909102 0.9600566594521394 1.0423853452801535 1.0 8.90660576950376 -2.0000000000000004 0.30782090841952703 0.9830050349912388 3.822494757926375 0.2804694573159481 0.14072152272807573 39.9634797571092 0.4997683809887525 0.04081939243397394 64.10668631624392 0.00999999999999999 2.0000000000000004 2.839489722935136 RNAET(ph)PEATTQQETDTDLPEAPPPPLEPAVIAR ddPTM_A549_MK2206_60min_R1 2 RNAETPEATTQQETDTDLPEAPPPPLEPAVIAR 33 1 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 RNAET(0.865)PEAT(0.062)T(0.062)QQET(0.01)DTDLPEAPPPPLEPAVIAR;RNAET(0.982)PEAT(0.007)T(0.007)QQET(0.005)DT(0.001)DLPEAPPPPLEPAVIAR 137.19 3.6907e-30 27361000.0 1109.0 1584.9299999999998 1647.88 1269.48 1791.77 1527.58 1320.84 1389.38 2055.8 1565.63 2145.06 True False 1296.1720875531726 1665.5961672166234 1881.574162985853 1580.5026569891238 1528.2030065433657 1689.2275016744622 1560.8195307701087 1586.3288697977982 1590.1645824380096 1211.9530956227416 1612.38240135574 0.8038862781330978 1.0330031919327198 1.166952803133902 0.9802281739494236 0.9477919166435991 1.047659351934199 0.9680206937620531 0.9838415927040414 0.9862205027175631 0.7516536366334032 1.0 10.654978226489295 RNAET(ph)PEATTQQETDTDLPEAPPPPLEPAVIAR ddPTM_A549_PD325901_60min_R1 2 RNAETPEATTQQETDTDLPEAPPPPLEPAVIAR 33 1 G3V119;H0YB24;Q8N163-2;Q8N163 G3V119 CCAR2 Cell cycle and apoptosis regulator protein 2 1 RNAET(0.946)PEAT(0.024)T(0.024)QQET(0.005)DTDLPEAPPPPLEPAVIAR;RNAET(0.539)PEAT(0.187)T(0.231)QQET(0.043)DTDLPEAPPPPLEPAVIAR 111.68 5.554e-15 36882000.0 2192.2 2208.48 1935.3200000000002 2145.68 2311.55 2737.7 2528.2 2485.7 2474.2 2693.8999999999996 3031.2 True False 2414.750530187656 2394.596360261235 2066.662453224572 2278.2137804071544 2149.194702414585 2715.4050788815402 2624.4120344841253 2436.1207635060723 2370.2179782622698 2523.806694256151 2658.3816163599636 0.908353607069438 0.9007722388405917 0.7774137620069711 0.8569927531798988 0.8084598122362162 1.0214504426944002 0.9872217059933059 0.9163924203033627 0.8916018541791351 0.949377124309157 1.0 11.37633250609762 -7.251855275376713 24.988784258337517 0.9526591922484384 0.8495086260312016 0.5565313266160137 0.0488517125497023 504.0936825752122 1314330.6978783542 0.00848100964466748 0.014565568846843348 5.599441666275695e-08 7.251855275376713 -0.10315056621723684 RNALFPEVFS(ph)PTPDENSDQNSR ddPTM_A549_MK2206_60min_R1 4 RNALFPEVFSPTPDENSDQNSR 22 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RNALFPEVFS(0.951)PT(0.049)PDENSDQNSR;RNALFPEVFS(0.713)PT(0.287)PDENSDQNSR;RNALFPEVFS(0.989)PT(0.011)PDENSDQNSR;RNALFPEVFS(0.993)PT(0.007)PDENSDQNSR 117.08 2.3571999999999997e-15 58743600.0 5561.6 7355.5 6301.5 5638.9400000000005 8322.2 5619.0 5973.8 5828.0 9379.2 9094.1 8387.199999999999 True False 6500.262111934835 7729.863532119322 7195.1474549453615 7020.4805531416405 7098.015404351679 6213.598850409674 7059.162133880317 6654.136847501452 7254.826175504703 7039.736493873248 6304.4267650559295 1.0310631488281183 1.226100931961694 1.141284961041423 1.113579523526967 1.1258780011046268 0.9855929939340885 1.1197151457143926 1.0554705598903757 1.1507511223251305 1.1166338758811476 1.0 12.6221494830018 -10.93871751131255 1.1057334329486725 0.9977797124927931 1.1102492390869416 0.0 0.0698935322572475 0.5230074121576476 1.0983950585755786 0.046819920228615045 0.010106946617629465 1.1515491754368539e-11 10.93871751131255 0.11246952659414855 RNALFPEVFS(ph)PTPDENSDQNSR ddPTM_A549_PD325901_60min_R1 2 RNALFPEVFSPTPDENSDQNSR 22 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RNALFPEVFS(0.895)PT(0.105)PDENSDQNSR;RNALFPEVFS(0.972)PT(0.028)PDENSDQNSR 169.26 1.9723999999999997e-40 110913000.0 4686.5 5016.8 4706.5 4382.0 5385.1 5250.2 5144.299999999999 5300.4 5571.3 5343.8 6415.700000000001 True False 5162.270029981047 5439.583342461133 5025.911392483641 4652.666187755934 5006.869153586465 5207.4441118982595 5340.069151568974 5194.679363916642 5337.157635717638 5006.39155602139 5626.609572473155 0.9174743624004448 0.9667604038270217 0.8932397614847338 0.8269040401377755 0.8898554429796192 0.9255030129288582 0.949074052995251 0.9232343735613666 0.9485565982449553 0.8897705610344756 1.0 12.458050143668222 -9.242406714198376 0.49592771602207075 0.9975846405956044 0.9017563785033362 0.0 0.04559124109620875 0.5226210874808981 0.30322584275325437 0.018642697601395315 0.012061751808222025 5.722598620094958e-10 9.242406714198376 -0.09582826209226813 RNDDIS(ph)ELEDLS(ph)ELEDLKDAK ddPTM_A549_PD325901_60min_R1 2 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 2 RNDDIS(1)ELEDLS(1)ELEDLKDAK;RNDDIS(1)ELEDLS(1)ELEDLKDAK 162.26 7.8385e-28 38537000.0 14192.7 14511.9 13974.7 15657.099999999999 17217.8 16533.9 16375.5 17692.4 16305.2 18292.1 17858.300000000003 True False 15633.532455886478 15734.86874251748 14923.107178697801 16624.203507145936 16008.481126185408 16399.253400197074 16998.67861351744 17339.5112025807 15619.949146860386 17137.133684250675 15661.842313090905 0.9981924312198722 1.0046626972719255 0.9528321688071374 1.0614462318555362 1.0221326971734843 1.0470832915033124 1.0853562610133767 1.1071182339824428 0.9973251444247078 1.09419654097313 1.0 13.934966307352658 -6.255211030623679 24.828659052326362 1.0211241647505136 0.9871724637230735 0.08882636040082459 0.044497503506569364 893.3639486280051 3561288.2084783837 0.006388923531823511 0.01642492607625851 5.556342001328303e-07 6.255211030623679 -0.03395170102744005 RNDDIS(ph)ELEDLSELEDLKDAK ddPTM_A549_MK2206_60min_R1 1 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDIS(0.998)ELEDLS(0.002)ELEDLKDAK 66.138 0.00041847 7835300.0 444.59 834.0 1028.4 622.63 993.98 753.24 956.54 756.24 1292.5 1359.2 1131.5 True False 519.625922818093 876.4470376979826 1174.2425839349062 775.1743779509228 847.7668587173442 832.947356839754 1130.3309363456897 863.4393358878682 999.7508136983788 1052.155775994603 850.5173221886665 0.6109527804571001 1.0304869928370068 1.380621597351111 0.9114151560795246 0.9967661288023572 0.9793420252703389 1.3289922578378166 1.0151931223057855 1.175462024836466 1.2370774216415168 1.0 9.732196808827638 RNDDIS(ph)ELEDLSELEDLKDAK ddPTM_A549_PD325901_60min_R1 5 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDIS(1)ELEDLSELEDLKDAK;RNDDIS(1)ELEDLSELEDLKDAK;RNDDIS(1)ELEDLSELEDLKDAK;RNDDIS(1)ELEDLSELEDLKDAK;RNDDIS(1)ELEDLSELEDLKDAK 229.04 1.2788999999999998e-76 57907100.0 6893.820000000001 7790.85 8471.2 7445.369999999999 8816.8 6993.51 8678.8 9198.800000000001 7906.969999999999 8579.39 8551.609999999999 True False 7593.675531437944 8447.412271490453 9046.106573463814 7905.253595237885 8197.538384308766 6936.557173250854 9009.076483221583 9015.322717681005 7574.667548128853 8037.685851232147 7499.816183122205 1.0125148865017468 1.1263492417988517 1.2061771052231152 1.0540596465588166 1.0930319069361638 0.9248969579895938 1.2012396388455304 1.2020724905190794 1.0099804266103343 1.071717713471482 1.0 12.872639520944224 -8.951173899959766 24.976453878826163 1.0044030485961082 1.1024636352890513 0.12257525662600632 0.0839961502528628 118.51951985998991 60627.48558379701 0.01401247744690807 0.014914670084681269 1.1189897284908877e-09 8.951173899959766 0.09806058669294315 RNDDISELEDLS(ph)ELEDLKDAK ddPTM_A549_MK2206_60min_R1 4 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDIS(0.002)ELEDLS(0.998)ELEDLKDAK;RNDDIS(0.129)ELEDLS(0.871)ELEDLKDAK;RNDDIS(0.016)ELEDLS(0.984)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK 175.9 4.8092e-36 30545700.0 2869.38 4002.45 3301.34 2848.71 4844.389999999999 3849.2899999999995 3115.06 3539.4300000000003 4900.82 5305.1900000000005 5373.740000000001 True False 3353.66119439434 4206.15760915383 3769.5196538775394 3546.644077883453 4131.786648324625 4256.619312848093 3681.026080010246 4041.1550415497727 3790.7920950013836 4106.743894385527 4039.292050320923 0.8302596476350084 1.0413105952117647 0.9332129509125368 0.8780360602055678 1.0228987151340923 1.0538033050890447 0.9113047618623633 1.0004612172642238 0.9384793294904744 1.0166989272437592 1.0 11.979886744720764 -5.242215727480221 24.088917794954074 0.9721160575565957 0.8302594362001458 0.3754305511614957 0.054607781270222505 2111.476275327868 2645797.9811824025 0.007013154132687795 0.3326641174192565 5.725115761638326e-06 5.242215727480221 -0.14185662135644994 RNDDISELEDLS(ph)ELEDLKDAK ddPTM_A549_PD325901_60min_R1 5 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK 203.04 1.8075000000000002e-56 114628400.0 6039.320000000001 6231.490000000001 6548.390000000001 6487.74 7320.31 5758.1 6176.640000000001 7464.039999999999 6912.370000000001 6947.1900000000005 7303.44 True False 6652.427320487599 6756.639531716055 6992.803124067987 6888.472965073411 6806.156679298531 5711.207942691971 6411.695415187098 7315.163866773891 6621.867127314183 6508.5432377851375 6405.163180320671 1.038603878340934 1.0548739105469265 1.0917447264345723 1.0754562797459506 1.0626047280434445 0.8916568995836328 1.0010198389459455 1.1420729903102422 1.0338326972932268 1.0161401129922956 1.0 12.645019610332922 -14.999991442585268 0.04821659609466116 0.8213342792856808 1.135481904075331 0.0512449163512535 0.05926831189053049 879.1065316839794 3.2389167909234877 20.94023818589384 5.168561603286735 1.0000197043697259e-15 14.999991442585268 0.3141476247896502 RNDS(ph)EEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR ddPTM_A549_MK2206_60min_R1 2 RNDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR 37 3 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 RNDS(1)EEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR;RNDS(1)EEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR 42.456 0.0070801 4137400.0 124.07 169.44 176.41 0.0 313.63 190.77 237.57 274.12 535.4 353.85 270.42 True False 145.00998277973147 178.06377226324489 201.42759065728973 0.0 267.4954424631488 210.95715477712278 280.73339384411037 312.97734945729223 414.13275485811346 273.915039240502 203.2672507876794 0.7133957005754955 0.8760081694086544 0.9909495498007632 0.0 1.3159790444677104 1.0378314950374166 1.381104889037671 1.5397332735326328 2.0373806073202188 1.3475610959417017 1.0 7.667233985222536 -7.371245484207062 1.5197587619572106 1.500437807829695 0.713165215825348 0.46081834721957216 0.3632939559630861 0.315046830766545 1.4294442190339 0.07254787803362236 0.1347804681748253 4.253579123422911e-08 7.371245484207062 -0.787272592004347 RNDS(ph)EEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR ddPTM_A549_PD325901_60min_R1 1 RNDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR 37 3 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 RNDS(1)EEEERERDEEQEPPPLLPPPGTGEEAGPGGGDR 48.025 0.001102 2381400.0 230.28 189.89 164.49 144.1 236.94 188.31 141.0 208.16 302.4 154.49 237.37 True False 253.65785607682386 205.89269671901292 175.65328055872408 153.00072972515522 220.2981517986252 186.77646579398154 146.36583215816054 204.00808550163904 289.69117962432705 144.73547503457164 208.17499481240588 1.218483787187814 0.9890366367226303 0.8437770382413684 0.7349620921716836 1.0582354138985037 0.8972089369440968 0.7030903605404489 0.9799836223628982 1.3915752940711175 0.6952586940857045 1.0 7.701652977784585 -8.544096052616014 22.639163552088164 1.1849564582893475 0.9121670330901381 0.0 0.2169613662384188 72.76270135789329 77638.05301596857 0.03207368956936414 0.0363712033946136 2.8569586018981603e-09 8.544096052616014 -0.27278942519920935 RNDYS(ph)RDR ddPTM_A549_MK2206_60min_R1 2 RNDYSRDR 8 2 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 RNDY(0.003)S(0.997)RDR;RNDY(0.001)S(0.999)RDR 53.123999999999995 0.0084357 19901600.0 2530.07 2202.23 1801.49 1284.7 1417.6799999999998 1258.54 1550.28 1303.06 1355.11 2661.8 2677.7 True False 2957.0839617273737 2314.314100515143 2056.9683708021134 1599.4515576723754 1209.1411499893402 1391.717867448761 1831.945808850644 1487.772745453885 1048.1797486660037 2060.4975312996135 2012.7531892395857 1.4691736560330848 1.1498250818270899 1.0219675128569699 0.7946585633167697 0.6007399001792919 0.6914498384049508 0.9101691248805074 0.7391729663665134 0.5207691406326893 1.0237209123877058 1.0 10.974954559509206 -5.6159504019435955 1.273873583868714 0.7587455879782283 1.544214972072582 0.6596440308098606 0.15136175129594545 0.41809233766522874 0.8724283839270012 0.026748004654911214 0.36055703125067495 2.4213055531095715e-06 5.6159504019435955 0.7854693840943536 RNDYS(ph)RDR ddPTM_A549_PD325901_60min_R1 1 RNDYSRDR 8 2 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 RNDY(0.006)S(0.994)RDR 41.283 0.029717 11523000.0 827.69 915.63 713.45 694.22 783.58 685.73 788.4 586.98 744.37 893.07 768.43 True False 911.7164794868263 992.7933535037644 761.8690073233734 737.1003927119866 728.5440440042493 680.1456422330568 818.4029934290343 575.2722234230982 713.0867175164036 836.6814077877206 673.917981479113 1.3528597018375945 1.4731664398162885 1.1305070175620269 1.0937538587324842 1.0810574343264192 1.009240977277792 1.2143955435538403 0.853623496082554 1.0581209243761729 1.2415181532200328 1.0 9.396429210093533 -5.891476900551668 3.5696631683948836 1.036487648181119 1.414027531690217 0.5892981129216799 0.10639311188929908 0.07804319496245998 1.9009498459841556 0.01123406466474604 0.04011341661923626 1.2838760560279464e-06 5.891476900551668 0.3775398835090982 RNEES(ph)DDDLDFDIDLEDTGGDHQMN ddPTM_A549_PD325901_60min_R1 3 RNEESDDDLDFDIDLEDTGGDHQMN 25 1 Q96MD7-1 Q96MD7-1 1 RNEES(1)DDDLDFDIDLEDTGGDHQMN;RNEES(1)DDDLDFDIDLEDTGGDHQMN;RNEES(1)DDDLDFDIDLEDTGGDHQMN 60.481 0.0001034 63245800.0 939.21 851.59 679.4799999999999 992.6399999999999 1168.03 1369.85 865.4000000000001 1277.25 1047.84 688.94 949.5899999999999 True False 1034.5579077901414 923.3564779553647 725.5935988451685 1053.9531183509935 1085.9916022847478 1358.69439577232 898.333270565051 1251.774246766759 1003.8029287617555 645.4402108247639 832.7964499469712 1.2422698341905967 1.1087420917970532 0.871273645428449 1.265559091201823 1.3040300572293495 1.6314843751541395 1.0786948847131288 1.5030974817993838 1.205340066982362 0.775027572302767 1.0 9.701820108490326 -10.157278937575558 0.9917074903147479 1.0199948990669183 1.2428293154103154 0.26638898153177537 0.20700227959181788 0.6497316842702195 1.2729357520668363 0.07948760191056146 0.037151042137762505 6.961792302280776e-11 10.157278937575558 0.22283441634339707 RNEGVVGGEDYEEVDRYS(ph)R ddPTM_A549_MK2206_60min_R1 2 RNEGVVGGEDYEEVDRYSR 19 2 Q86UK7-2;Q86UK7-3;H3BQQ2;H3BPG6;Q86UK7 Q86UK7-2 ZNF598 Zinc finger protein 598 1 RNEGVVGGEDY(0.001)EEVDRY(0.015)S(0.984)R;RNEGVVGGEDYEEVDRY(0.001)S(0.999)R 84.762 2.8449e-05 3285200.0 507.61 768.88 358.91999999999996 523.22 843.77 654.63 548.63 506.40999999999997 888.21 1039.1999999999998 1004.5400000000001 True False 593.2821581270211 808.012707847992 409.82025303959165 651.4089234882382 719.6525507353604 723.9025120917747 648.3089694182524 578.1951683155818 687.0318531799121 804.443998244255 755.08499410641 0.7857157310206235 1.070095041160523 0.5427471824209473 0.8626961581446004 0.9530748940217234 0.9587033482879135 0.8585907208836543 0.7657352123648479 0.9098735354858508 1.0653688055293138 1.0 9.560495236430105 -10.029111785556415 0.4070750539425184 1.0235807594122148 0.844489359139235 0.2096223961149315 0.12938613097296292 2.060062612247588 0.6290302930168372 0.15161738461741012 0.04373687167020166 9.351649356809218e-11 10.029111785556415 -0.17909140027297987 RNELVIR ddPTM_A549_MK2206_60min_R1 2 RNELVIR 7 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 139.88 0.0055056 28317000.0 1384.53 1692.2800000000002 1745.32 1659.93 2567.5 1707.27 1539.6799999999998 1560.77 2761.6 2204.12 2792.5 False True 1618.2048154914291 1778.4098236877026 1992.8326201801538 2066.6129245170887 2189.8241511466827 1887.9321782058928 1819.4199260592666 1782.0139271576593 2136.102009369006 1706.207761172177 2099.045180920771 0.7709242422221633 0.8472470434903082 0.9493995833410189 0.9845490432037982 1.04324774476083 0.8994242693612383 0.8667845468962971 0.8489640639254643 1.0176541356922957 0.8128494692161551 1.0 11.035517504931423 -5.632235857699422 2.006095425893262 0.9804890061911883 0.7668266690145752 0.14644193577766595 0.08019927223932216 0.2649242592353306 1.8119784401211079 0.010062506808019768 0.07865848648629027 2.3321911462741818e-06 5.632235857699422 -0.2136623371766131 RNELVIR ddPTM_A549_PD325901_60min_R1 4 RNELVIR 7 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 140.09 0.005499800000000001 43732200.0 4024.83 4598.75 4186.65 3835.7799999999997 5049.6 4695.83 4108.6 4563.0599999999995 5134.0 4573.84 5110.58 False True 4433.427778676757 4986.302801814528 4470.7812453716415 4072.7074189115597 4694.9335161742965 4657.588717377475 4264.955021312188 4472.046188648677 4918.235833965921 4285.046961823582 4482.011058635824 0.9891603837376844 1.1125146137707642 0.9974944699784831 0.9086785743342537 1.0475060089662696 1.03917385665601 0.9515717309743318 0.9977766966978033 1.0973279114270793 0.9560545268105181 1.0 12.12993049313096 RNES(ph)LTATDGLR ddPTM_A549_MK2206_60min_R1 5 RNESLTATDGLR 12 1 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 RNES(0.992)LT(0.007)AT(0.001)DGLR;RNES(0.955)LT(0.022)AT(0.022)DGLR;RNES(0.992)LT(0.005)AT(0.003)DGLR;RNES(1)LTATDGLR;RNES(1)LTATDGLR 109.07 4.3581e-05 37302700.0 2641.7599999999998 2962.46 2204.29 2052.85 3196.91 2938.29 2648.8100000000004 2462.27 3339.7400000000002 3566.8799999999997 4068.5600000000004 True False 3087.6245031690437 3113.2365603102708 2516.891467660319 2555.798342155937 2726.6487739210684 3249.217897520951 3130.064490248005 2811.3043128856216 2583.294222468877 2761.1193306942528 3058.224265456404 1.0096134995869088 1.0179883128504499 0.8229911377296272 0.8357131852704446 0.8915790789836494 1.0624524611297739 1.0234908294996736 0.9192603513876271 0.844703984481449 0.9028505076890391 1.0 11.57847849083705 RNES(ph)LTATDGLR ddPTM_A549_PD325901_60min_R1 4 RNESLTATDGLR 12 1 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 RNES(0.999)LT(0.001)ATDGLR;RNES(1)LTATDGLR;RNES(1)LTATDGLR;RNES(1)LTATDGLR 137.21 1.0046e-08 50051600.0 4797.030000000001 4962.74 4621.67 4498.16 5361.799999999999 4725.3099999999995 5025.469999999999 5442.73 5834.08 5423.7 6146.47 True False 5284.020954213158 5380.967516537547 4935.324318559415 4776.001127137435 4985.205665205829 4686.828642031537 5216.7170108927 5334.170480410913 5588.893906159706 5081.246656385566 5390.493155683568 0.9802481519973457 0.9982328816917285 0.915560817168604 0.8860044877529931 0.9248143947552523 0.8694619409895532 0.9677624774260879 0.9895514800508984 1.0368056770959722 0.9426311303313794 1.0 12.396201550351016 -8.22058549378554 2.6466534862710747 1.0168035910626347 0.9293365488440664 0.26586380091483086 0.042664318573863005 0.17188242637150153 2.3823277157711633 0.006547858542440816 0.008459090751119041 6.017477931446766e-09 8.22058549378554 -0.08746704221856838 RNGAAGPHS(ph)PDPLLDEQAFGDLTDLPVVPK ddPTM_A549_MK2206_60min_R1 3 RNGAAGPHSPDPLLDEQAFGDLTDLPVVPK 30 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 RNGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;RNGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;RNGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK 211.59 1.2380999999999998e-90 64504400.0 6376.9 6726.6 5816.8 5243.5 7818.299999999999 5798.3 6057.6 5985.400000000001 8409.6 8471.9 7852.1 True False 7453.164819763601 7068.955208368412 6641.709706566085 6528.157735389659 6668.238426839384 6411.872257399961 7158.187509155552 6833.848779518735 6504.839027371673 6558.091906009916 5902.206863064631 1.2627759400309564 1.1976800156912775 1.1252925999814039 1.106053699378475 1.1297873120253537 1.086351665768403 1.212798479489208 1.1578463679889328 1.1021028537780078 1.1111253905805543 1.0 12.527038770509522 -14.999999999766061 0.09462091430062461 0.4833587085133531 1.269111657606173 0.28762928897725226 0.05692034733530458 57.27242023184393 0.3928868196756588 5.850607792882154 0.40954223080633895 1.0000000005386647e-15 14.999999999766061 0.7857529490928199 RNGKEQYVPPRS(ph)PK ddPTM_A549_PD325901_60min_R1 1 RNGKEQYVPPRSPK 14 3 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 RNGKEQY(0.001)VPPRS(0.999)PK 69.188 0.0005127 9419500.0 1119.4 1117.1 1198.0 1630.3 1177.4 2058.6 1675.7 1844.9 1800.7 1629.1 2434.6 True False 1233.040663941275 1211.2419374627905 1279.3034841592275 1730.9999283200605 1094.7034858094928 2041.8354441266538 1739.4696804782243 1808.1020222039479 1725.02284110293 1526.238347976054 2135.159634200966 0.5774934314935716 0.5672840185160533 0.5991605796903223 0.8107121831046824 0.5127033446467154 0.9562917036368399 0.8146789835361329 0.8468228760237817 0.8079128199463548 0.7148122901579737 1.0 11.060128220953104 -4.696085101808048 0.13643648722629584 1.0689543198446885 5.6905321190988915e-15 0.3620037398604209 0.12489294564337264 14.114769377626263 0.25503968793755577 0.2945139663777354 2.751012651131668 2.013329690888409e-05 4.696085101808048 -1.0689543198446827 RNKLDHYAIIK ddPTM_A549_MK2206_60min_R1 1 RNKLDHYAIIK 11 2 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 0 69.979 0.00097139 2078100.0 512.81 360.09 415.61 445.1 432.5 343.98 467.94 376.71 613.28 483.62 553.11 False True 599.3597909992272 378.4170429312553 474.5497474807334 554.1495199812985 368.87982292928564 380.3797352845558 552.9586408865307 430.10979612599033 474.37305920691773 374.36990611132285 415.75752194058606 1.4416090133538917 0.910186882885388 1.1414098902305587 1.3328670937683944 0.8872475023602833 0.9149076449876331 1.3300027340588956 1.0345207805704 1.1409849110912975 0.9004525146386222 1.0 8.699598554954651 -14.999810012868386 0.016962718071092942 8.92273187328953e-07 1.9460122775861264 0.12338666361564488 0.17775456204541243 7528.539544741747 9.92902914404309 729.267510709372 443.2354958462738 1.0004375572373689e-15 14.999810012868386 1.946011385312939 RNLDIERPTYTNLNR ddPTM_A549_MK2206_60min_R1 2 RNLDIERPTYTNLNR 15 2 Q9BQE3;F5H5D3;F8VQQ4;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2;C9JDS9;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ; 210.9 7.1351e-46 17757800.0 1681.4099999999999 2137.5 1716.8600000000001 1551.65 2463.8999999999996 1441.4 1358.08 1756.58 2605.7 2578.4 2565.2 False True 1965.1909014723005 2246.2896199993274 1960.3365642303409 1931.8043196562166 2101.463573908593 1593.9279912761176 1604.8255567277417 2005.5805943006353 2015.5131104478646 1995.937649223429 1928.190044081633 1.019189424561255 1.1649731450974274 1.0166718629459675 1.0018744394960846 1.089863304895077 0.8266446537095781 0.832296360855911 1.0401363706116749 1.0452875828470642 1.0351353360368911 1.0 10.913031536511177 -5.939450016807563 10.76860196550863 0.999913688349536 1.0920420283519812 0.17033731664567753 0.08621148447782202 0.7336998657595017 126.39937518079498 0.012196859977997309 0.0379790727373632 1.1496085448904544e-06 5.939450016807563 0.09212834000244519 RNLDIERPTYTNLNR ddPTM_A549_PD325901_60min_R1 2 RNLDIERPTYTNLNR 15 2 Q9BQE3;F5H5D3;F8VQQ4;F8VVB9;Q9NY65;C9J2C0;Q9NY65-2;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2;C9JDS9;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA1A;TUBA1B;TUBA8;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ; 209.6 8.035e-46 25895000.0 2362.0 2583.5 2617.1 2501.3 2935.0 2947.1000000000004 2855.0 2922.2 2884.0 2531.6000000000004 3283.3 False True 2601.788501187502 2801.22061179404 2794.712143900763 2655.7996201355368 2728.8557252003234 2923.09979470789 2963.6485873159463 2863.9144285784487 2762.7955093801556 2371.754343954442 2879.474914553533 0.9035635240430331 0.9728234122256187 0.9705631154401244 0.922320804641329 0.9476921335233917 1.0151502900524907 1.0292322993810366 0.9945960682288156 0.9594789297924936 0.8236759875792098 1.0 11.491590038261709 -7.167448890436998 8.509745923679453 0.9877218447354276 0.9451857197883292 0.004685339361885088 0.05563546932222694 0.3044499478050898 25.296446474032734 0.004216359034263449 0.0073154599110260825 6.800660732701332e-08 7.167448890436998 -0.04253612494709835 RNLFNQELLS(ph)PSKR ddPTM_A549_MK2206_60min_R1 1 RNLFNQELLSPSKR 14 2 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 RNLFNQELLS(0.948)PS(0.052)KR 47.754 0.0063735 2087200.0 938.05 837.51 637.85 856.75 1146.8 973.1 758.95 692.62 1088.1 946.92 1106.0 True False 1096.3699068793994 880.1356817055613 728.306721278568 1066.6537884609688 978.1072391567735 1076.0727961084979 896.8413909920761 790.8010060597904 841.6470873386505 733.010114335498 831.349675952864 1.3187831048623173 1.0586828950125955 0.8760534133170959 1.2830386771227251 1.1765292841856239 1.2943684555781425 1.0787775793190124 0.9512254938373578 1.0123863780592492 0.8817109521277522 1.0 9.699311609795453 -7.999353044415863 24.99716999827291 1.0025389090003334 1.1579090805328363 0.3625741468518022 0.12326249674673227 22.459774060203355 867750.2449919373 0.01824104842960113 0.025085302884561993 1.0014907803938043e-08 7.999353044415863 0.15537017153250288 RNLLEDDS(ph)DEEEDFFLR ddPTM_A549_PD325901_60min_R1 3 RNLLEDDSDEEEDFFLR 17 1 O75379 O75379 VAMP4 Vesicle-associated membrane protein 4 1 RNLLEDDS(1)DEEEDFFLR;RNLLEDDS(1)DEEEDFFLR;RNLLEDDS(1)DEEEDFFLR 279.15 8.878099999999998e-116 61858100.0 4017.6099999999997 3655.24 5167.52 4131.6 5223.25 4760.17 4574.88 4407.799999999999 5303.6 4498.12 4022.2000000000003 True False 4425.474809591839 3963.2799028658974 5518.218982022114 4386.799548455595 4856.386939234274 4721.404753749333 4748.979561870392 4319.882971147791 5080.708135765811 4214.107935546038 3527.4948988265555 1.2545658991779132 1.123539513603353 1.5643449927759743 1.2436019538723906 1.3767240147816466 1.338458279647673 1.3462753875137201 1.2246319541340311 1.440316224824575 1.1946460750227843 1.0 11.784428281179041 -10.903512791400592 1.079434533167702 0.9943285474248257 1.3315187606277994 0.28982291003683425 0.12418056431688851 0.3151127799491897 0.6336954545151623 0.08243400961789706 0.018317824692099898 1.2487836632634466e-11 10.903512791400592 0.3371902132029737 RNLS(ph)FR ddPTM_A549_PD325901_60min_R1 2 RNLSFR 6 1 Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7 Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 RNLS(1)FR;RNLS(1)FR 61.998999999999995 0.025845999999999997 17283300.0 943.5899999999999 747.02 889.22 908.6600000000001 1127.99 1131.48 921.39 1278.6599999999999 1100.08 998.96 1160.3899999999999 True False 1039.3825621657559 809.9739970669181 949.5678165142469 964.7858644834113 1048.7638737542466 1122.2656020209984 956.4540006539547 1253.1561232106355 1053.8474632312486 935.8854951164193 1017.6693863182694 1.0213361786641146 0.7959107426796506 0.933080850500573 0.9480346735925894 1.0305546062935733 1.1027801534652995 0.9398474725806776 1.231398074913417 1.0355499314407643 0.9196360897739801 1.0 9.991053228994275 -6.607422971233969 2.61641936630234 1.0353734959482899 0.9062701959240743 0.2597826544772607 0.09190137280175442 0.25096925367243444 3.4642059357484465 0.011782285509989953 0.027652185834568455 2.4693180373738864e-07 6.607422971233969 -0.12910330002421555 RNPS(ph)PDHSYK ddPTM_A549_MK2206_60min_R1 2 RNPSPDHSYK 10 1 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 RNPS(0.997)PDHS(0.001)Y(0.001)K;RNPS(0.891)PDHS(0.102)Y(0.007)K 74.987 0.00065922 41464000.0 3327.3 3355.5 3295.6000000000004 2919.4 3875.5 2681.1000000000004 3287.2 3514.3 4191.6 4025.2 4689.1 True False 3888.866895325222 3526.2806175006963 3762.965635565808 3634.6531310568444 3305.4190838438053 2964.812222429857 3884.4416897939973 4012.462787092373 3242.2092926097657 3115.9045243771875 3524.6670574236628 1.1033288625473094 1.0004577907787446 1.067608819289822 1.0312046703536235 0.9377961180423902 0.8411609306999257 1.1020733665077886 1.138394838922818 0.919862568517221 0.8840280439579283 1.0 11.783271270602045 -6.5971123703547025 6.283433041638928 0.9750455913415996 1.0511732856992835 0.1588098319266994 0.08510080987819334 0.3141180967287511 20.73178274629443 0.01212590915366732 0.025478716847682364 2.528643644713859e-07 6.5971123703547025 0.07612769435768385 RNPS(ph)PDHSYKR ddPTM_A549_MK2206_60min_R1 2 RNPSPDHSYKR 11 2 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 RNPS(0.995)PDHS(0.005)YKR;RNPS(0.601)PDHS(0.399)Y(0.001)KR 84.946 9.7225e-05 79514000.0 6658.4 6888.4 5987.7 5618.1 8387.6 6231.5 5379.2 5819.7 9416.099999999999 9995.900000000001 8723.8 True False 7782.175137749363 7238.99013726473 6836.845896370121 6994.534752206093 7153.79515098653 6890.913193865076 6356.531010507387 6644.66029708377 7283.36838442189 7737.819247545952 6557.439695368529 1.1867703706441792 1.1039354494373124 1.0426090385854307 1.0666563593632863 1.0909433381505897 1.0508542226826847 0.9693617182628392 1.0133010146897492 1.1107030674740446 1.1800061620103217 1.0 12.678916919658208 -2.6470135644670094 0.8043415753102365 1.0461075084172256 12.423223605999725 0.2973294476936451 0.05547080766281365 110.76210979825203 1.1434370059665055 0.007525649508390847 2239.172303867893 0.0022541688058332517 2.6470135644670094 11.3771160975825 RNPS(ph)PDHSYKR ddPTM_A549_PD325901_60min_R1 4 RNPSPDHSYKR 11 2 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 RNPS(0.971)PDHS(0.016)Y(0.014)KR;RNPS(0.94)PDHS(0.06)Y(0.001)KR;RNPS(0.948)PDHS(0.048)Y(0.003)KR;RNPS(0.996)PDHS(0.003)Y(0.001)KR 98.439 5.6735e-05 36698100.0 3541.52 2974.62 3749.1600000000003 3521.56 4048.62 3849.24 3330.38 3718.1099999999997 4026.75 3770.54 4240.5 True False 3901.0525032707696 3225.3016668297964 4003.600543130557 3739.078763156958 3764.258898180763 3817.8930656514553 3457.1194333538633 3643.9493792491317 3857.519700900326 3532.4674609156186 3718.9453827442685 1.048967409247651 0.8672624453682607 1.0765419039782287 1.005413733825215 1.0121845068353914 1.0266063823809566 0.9295967209937351 0.9798340669795489 1.037261724466037 0.9498573109747999 1.0 11.860677845028606 -8.750826397920893 24.96411586230962 1.0175958151712867 0.9918942407239668 0.0 0.058048849744402296 541.4208477257968 1273541.5375689333 0.008722625763568801 0.00983934717084702 1.7748988257315517e-09 8.750826397920893 -0.025701574447319908 RNPSPDHS(ph)YKR ddPTM_A549_PD325901_60min_R1 1 RNPSPDHSYKR 11 2 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 RNPS(0.255)PDHS(0.732)Y(0.014)KR 76.759 0.00024689 29939000.0 3213.6 3381.0 3213.0 3227.2 3987.6 3750.7 3428.4 3922.9 4183.6 3981.1 5054.8 True False 3539.8423062727156 3665.9287356205323 3431.0535013385647 3426.5368144970225 3707.5247324731886 3720.1555427406215 3558.8696380924644 3844.6546820444823 4007.7778408608965 3729.7326665812234 4433.091645017269 0.7985042019718783 0.8269463004991072 0.7739640359555885 0.772945178868206 0.8363293677089652 0.8391785779845139 0.8027963153192609 0.8672626216437052 0.9040593251361227 0.8413389492575434 1.0 12.114097472214956 -9.157443488881407 0.4545096884044557 1.0009928630985476 0.7916217878353862 0.35363365341119757 0.05000076964174507 0.169472175036348 0.08554472606659759 0.012881611741331648 0.00872227998110134 6.959155024892521e-10 9.157443488881407 -0.20937107526316145 RNQEIQQGEDAFPPS(ph)SPLFAEPYK ddPTM_A549_PD325901_60min_R1 1 RNQEIQQGEDAFPPSSPLFAEPYK 24 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 RNQEIQQGEDAFPPS(0.5)S(0.5)PLFAEPYK 65.425 0.00012215 4192300.0 4126.9 4160.6 4119.1 4054.1 4354.4 4128.6 4374.8 3928.8 4484.6 5303.3 4460.5 True False 4545.859849936793 4511.228363626971 4398.646896160495 4304.512549470869 4048.5619658644973 4094.978050432968 4541.2854079824165 3850.4370019160233 4296.12785761659 4968.448732933159 3911.886777439171 1.1620632468592658 1.1532103612109514 1.1244310345403121 1.1003673660229814 1.0349384315552195 1.0468038272604745 1.1608938771370236 0.9842915250314647 1.098223977849623 1.2700901165103868 1.0 11.933648899330844 -2.0000000000000004 0.07336939283556844 0.9302610786502937 1.494736778976886 0.0 0.08843980213556872 135.0060456930293 0.7078342666426363 0.8905739550557292 7.806679144955026 0.00999999999999999 2.0000000000000004 0.5644757003265922 RNQVGPEVRS(ph)CPKAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RNQVGPEVRSCPKASPR 17 3 Q3T8J9-3;Q3T8J9 Q3T8J9-3 GON4L GON-4-like protein 2 RNQVGPEVRS(1)CPKAS(1)PR 41.615 0.03307 169250000.0 13821.0 14497.0 11552.0 10426.0 15778.0 14595.0 11917.0 12624.0 19258.0 19836.0 18088.0 True False 16153.646908992258 15234.835378306547 13190.247306122155 12980.370468040925 13457.077100990215 16139.433212623087 14082.16464385345 14413.490659378573 14896.093748706668 15355.033823299695 13596.250396596206 1.1880957203492142 1.12051741722266 0.9701385986112986 0.9547022222605237 0.9897638472706539 1.1870503073894227 1.0357388421868792 1.0601077678730424 1.0956030754211379 1.1293579755741918 1.0 13.730921216312275 -10.981798181823375 1.2512131432260507 0.9999704144439622 1.0657636473121994 0.0 0.08402775588011664 0.9831387859016485 2.736183596536436 0.05502126654125322 0.012624243219202814 1.042801910538232e-11 10.981798181823375 0.06579323286823724 RNQVGPEVRS(ph)CPKAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RNQVGPEVRSCPKASPR 17 3 Q3T8J9-3;Q3T8J9 Q3T8J9-3 GON4L GON-4-like protein 2 RNQVGPEVRS(1)CPKAS(1)PR;RNQVGPEVRS(1)CPKAS(1)PR 42.172 0.030388 547750000.0 35492.0 37946.0 35203.0 35467.0 43892.0 42920.0 41103.0 39845.0 38936.0 38348.0 41789.0 True False 39095.12171217057 41143.84259149858 37592.087272835786 37657.716038598744 40809.17733917977 42570.47375008063 42667.19715742462 39050.26021720219 37299.655323587314 35926.70073548938 36649.21792229695 1.066738226039622 1.1226390336277041 1.0257268614172856 1.0275175890094024 1.1135074539844942 1.1615656803465173 1.1642048473691005 1.0655141482144554 1.0177476475124083 0.9802856042292788 1.0 15.161494791778594 -8.68232434284914 3.4572134595483757 1.0078938497338235 1.0969767108864439 0.4806919158539237 0.04417881204130827 0.16877345801373755 3.994204075523035 0.008199937557448148 0.009177475229867888 2.0781440932779677e-09 8.68232434284914 0.08908286115262043 RNRS(ph)DTEQEGK ddPTM_A549_PD325901_60min_R1 1 RNRSDTEQEGK 11 2 Q13769;F8WES8;C9JXU6;F5GZF3;C9JCL9;C9JXG5;F8WCP5 Q13769 THOC5 THO complex subunit 5 homolog 1 RNRS(0.867)DT(0.133)EQEGK 48.70399999999999 0.009775200000000001 5654400.0 1141.6 1297.4 899.06 865.72 974.31 631.91 618.68 777.45 868.72 1156.3 1198.1 True False 1257.4943915984982 1406.7364512256968 960.0756180869747 919.193558207227 905.8778267870282 626.763934469093 642.2242059546865 761.9431498522738 832.2107194551763 1083.2910206646072 1050.741295381655 1.1967687927804773 1.338803811564992 0.9137126543962962 0.8748048280270107 0.8621321259273351 0.5964969086338583 0.6112105889218097 0.7251481912829146 0.792022473193934 1.0309778681260733 1.0 10.037191789534809 -5.8421056907932485 4.880017439904938 0.8422565716798136 1.2672573226454362 0.6135337493358606 0.13615041173150902 0.1110313226665757 4.642691407000143 0.0213780835614548 0.07158789125719249 1.438448471894525e-06 5.8421056907932485 0.4250007509656226 RNS(ph)CNVGGGGGGFK ddPTM_A549_MK2206_60min_R1 1 RNSCNVGGGGGGFK 14 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 RNS(1)CNVGGGGGGFK 49.463 0.011579 6478100.0 2486.3 2427.8 2875.3 2356.5 3761.0 2324.6 2379.7 2422.5 3746.7 3834.2 3637.0 True False 2905.92665580113 2551.364650027774 3283.060775562072 2933.842605787303 3207.761882166572 2570.5876290554033 2812.0606866642647 2765.8967935951055 2898.078432250456 2968.0515570324483 2733.8325239064793 1.0629497712057134 0.933255650343215 1.2009004746460399 1.0731610587451135 1.1733571292739164 0.9402871633783152 1.0286148335985126 1.0117286883553527 1.0600789941986934 1.0856742434212043 1.0 11.416709150016363 -7.264762873571557 24.971470545050554 1.0221595327266195 1.0854549662423227 0.1771975820445182 0.07242132097468994 415.54547137256094 3122256.3999744398 0.010196520979029757 0.016732179633608055 5.4354702921819674e-08 7.264762873571557 0.06329543351570321 RNS(ph)CNVGGGGGGFK ddPTM_A549_PD325901_60min_R1 1 RNSCNVGGGGGGFK 14 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 RNS(1)CNVGGGGGGFK 85.63600000000001 6.737e-05 16324000.0 3403.6 3643.8 4714.1 4136.1 3793.0 4281.4 4493.9 4305.3 3387.4 4688.7 5018.2 True False 3749.130966402109 3950.87581391721 5034.027174186156 4391.577503235356 3526.592765139638 4246.533697893646 4664.917823656436 4219.427414057489 3245.039358000813 4392.654681821449 4400.993212990755 0.8518829239126084 0.8977236779768489 1.143838886033004 0.9978605489034599 0.8013174741396826 0.964903487094418 1.059969329170205 0.958744358342266 0.7373425045106131 0.9981053069691878 1.0 12.103613431538347 -8.572923163573925 24.99885562952954 0.8744975825672007 0.96345947515812 0.005035252461358941 0.1111666214642617 198.57376113011074 99193.2789378733 0.02155075968700599 0.02443626652245818 2.673479365234223e-09 8.572923163573925 0.08896189259091936 RNS(ph)DNRNPSADR ddPTM_A549_MK2206_60min_R1 2 RNSDNRNPSADR 12 2 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RNS(0.999)DNRNPS(0.001)ADR;RNS(1)DNRNPSADR 58.885 0.0022946999999999998 31777000.0 995.32 748.49 867.17 459.1 555.71 465.1 425.7 502.6 762.62 1181.6599999999999 832.0799999999999 True False 1163.30568276233 786.5849439407233 990.1477455375656 571.5795206097819 473.96579514458574 514.3165732916065 503.04417964994644 573.8450891479463 589.8877876538935 914.7221853014883 625.4515717602698 1.859945254415661 1.2576272559791641 1.583092585011651 0.9138669505636215 0.7577977521275664 0.8223123843851169 0.804289576304333 0.9174892430646832 0.9431390283243104 1.462498819416339 1.0 9.28875437171001 -6.263373843038759 24.921579922456456 0.9272439067089537 1.5359622793574275 0.6051511852879129 0.21987911003820748 54.6307412901965 703811.075158318 0.020423119109294438 0.04977447064654489 5.452882719143421e-07 6.263373843038759 0.6087183726484737 RNS(ph)DNRNPSADR ddPTM_A549_PD325901_60min_R1 3 RNSDNRNPSADR 12 2 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RNS(1)DNRNPSADR;RNS(0.997)DNRNPS(0.003)ADR;RNS(0.998)DNRNPS(0.002)ADR 76.158 0.00024248 79962000.0 1924.0 1577.5 1641.52 1521.83 1783.8600000000001 1492.33 1645.06 1864.89 2207.63 3045.0 3153.31 True False 2119.32306362606 1710.4414612367314 1752.9234184616487 1615.8299827733028 1658.5678275829143 1480.1769592604348 1707.6636585113727 1827.6933059720964 2114.850988340122 2852.738180337048 2765.47286047903 0.7663510620237853 0.6184987333198605 0.6338602860698516 0.5842870511820578 0.5997411333465845 0.5352346719483052 0.6174942748183667 0.660897212947339 0.7647339514927627 1.0315552978679032 1.0 11.433310468609095 -9.592531780538504 0.6581369831830832 0.9799780663471873 0.6137048841121967 0.8509947952930283 0.06128967555660965 0.1738035890554223 0.16332434343535115 0.02704237641542086 0.014997724313734547 2.555454892691768e-10 9.592531780538504 -0.3662731822349906 RNS(ph)EGSELSCTEGSLTSSLDSR ddPTM_A549_MK2206_60min_R1 1 RNSEGSELSCTEGSLTSSLDSR 22 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 RNS(0.96)EGS(0.04)ELSCTEGSLTSSLDSR 124.5 6.141e-16 34933000.0 694.86 1206.4 750.03 342.29 1181.7 800.07 526.35 912.04 977.52 1036.8 1169.5 True False 812.1353803040561 1267.800607048977 856.3955321165861 426.15106536598176 1007.8734953885242 884.7328763565167 621.9809818152439 1041.3244630053582 756.1132807786756 802.5861599111274 879.0808734420201 0.9238460360582746 1.4421888194256054 0.9741942499139924 0.4847688969700791 1.1465082745370396 1.0064294458965606 0.7075355642534825 1.1845604818224258 0.8601179978107499 0.9129833035368186 1.0 9.779852085913173 -5.97467328570652 24.85769041515946 0.9237160032893253 1.1893112338056073 0.18554047903000537 0.21496813419008953 232.2572523463231 227953.15741050465 0.026778285047446473 0.08325311685270793 1.0600508882839519e-06 5.97467328570652 0.265595230516282 RNS(ph)EGSELSCTEGSLTSSLDSR ddPTM_A549_PD325901_60min_R1 2 RNSEGSELSCTEGSLTSSLDSR 22 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 RNS(0.977)EGS(0.023)ELSCTEGSLTSSLDSR;RNS(0.996)EGS(0.004)ELSCTEGSLTSSLDSR 191.62 2.5263000000000003e-50 60880000.0 5552.6 5363.1 5309.700000000001 5720.5 5572.4 5194.5 5342.1 6000.7 5745.8 7247.6 7723.5 True False 6116.295864391927 5815.067258801089 5670.048171819906 6073.842292801875 5181.013847736384 5152.197714230984 5545.39653880929 5881.011331041915 5504.324007557731 6789.9852991168445 6773.558463300406 0.902966424152154 0.8584951750704616 0.837085588400928 0.8966988807597011 0.7648880386590688 0.7606338296400535 0.8186829077883686 0.8682306889215806 0.8126192513699451 1.0024251412171963 1.0 12.725698231994889 -10.740765580188494 0.8184653716979854 1.00864486982832 0.8327818837530595 0.6721185184759156 0.044416986107824824 0.35868463912582366 0.3922622996084973 0.04082451990710889 0.008641106141677544 1.816495891026814e-11 10.740765580188494 -0.1758629860752604 RNS(ph)EKDDKYK ddPTM_A549_PD325901_60min_R1 1 RNSEKDDKYK 10 3 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 RNS(0.999)EKDDKY(0.001)K 64.244 0.0018105999999999999 33995000.0 6556.8 6761.3 7158.4 6381.0 7796.9 6517.1 5082.4 6081.4 7113.0 8755.4 8809.8 True False 7222.4415091389565 7331.098479784413 7644.212070956106 6775.139877697541 7249.272641844775 6464.026898337617 5275.813513195992 5960.1017062339915 6814.065346123807 8202.582549794084 7726.250449923467 0.9347925692999635 0.9488559201257877 0.9893818638809238 0.8768988167817745 0.9382652929554701 0.8366318099876826 0.6828426734792491 0.7714093330087468 0.881936896854192 1.0616511337495325 1.0 12.91555272860603 -4.356938756928663 14.253793736454588 0.9096527240560419 0.8893573635565409 0.0 0.10372057641008668 0.0 0.0 0.014271852720341472 11169396.207456252 4.396036028167473e-05 4.356938756928663 -0.02029536049950098 RNS(ph)EPPPAAALPLGR ddPTM_A549_MK2206_60min_R1 2 RNSEPPPAAALPLGR 15 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 RNS(1)EPPPAAALPLGR;RNS(1)EPPPAAALPLGR 53.188 0.0076262 4654900.0 1633.99 1501.62 1596.0700000000002 1435.88 2236.01 1869.58 1250.87 1379.28 2498.1000000000004 2323.5 2108.13 True False 1909.7675647799906 1578.0460440624051 1822.4167259247229 1787.6706644591025 1907.0958910245356 2067.417714673237 1478.1368874764594 1574.7971638678448 1932.2843386459729 1798.6197362591672 1584.6231395718896 1.2051872253335538 0.9958494260589547 1.1500631793229252 1.128136160464039 1.2035012258749214 1.3046746971218541 0.9328002668671119 0.9937991718922523 1.219396770369016 1.1350457350667567 1.0 10.629924059211458 -11.098848250257811 1.4266174371163083 0.9998347386693406 1.1336903742053266 0.0 0.11377390854998178 0.6258641940071451 2.271941569050212 0.079578431265657 0.01725949517340843 7.96437590393637e-12 11.098848250257811 0.133855635535986 RNS(ph)EPPPAAALPLGR ddPTM_A549_PD325901_60min_R1 2 RNSEPPPAAALPLGR 15 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 RNS(1)EPPPAAALPLGR;RNS(1)EPPPAAALPLGR 79.676 0.0001826 8661300.0 2122.2 1994.31 2958.5 2227.05 2135.4 2294.5 2120.3999999999996 2726.3 2901.1000000000004 3359.6000000000004 3179.6000000000004 True False 2337.644181718932 2162.3775027315532 3159.281600905738 2364.609820502478 1985.4168707300764 2275.8143527390516 2201.0929823274014 2671.921807759025 2779.1768558470076 3147.4742826470792 2788.5293571450716 0.8383071799940593 0.7754544513547529 1.1329561916967754 0.8479773807808834 0.7119942508917206 0.8161342633555978 0.7893382856764706 0.9581831372557502 0.9966460811057628 1.1287219460617404 1.0 11.445288744159434 -8.432025335048047 4.751263043591801 0.9976216571164511 0.847306201837148 0.38168730729116496 0.10737838147679536 0.20344562417634438 7.795919652228168 0.016801307839283536 0.020269181049699832 3.698066060743907e-09 8.432025335048047 -0.15031545527930312 RNS(ph)ESDQCR ddPTM_A549_MK2206_60min_R1 3 RNSESDQCR 9 1 Q5VSY0-2;Q5VSY0 Q5VSY0-2 GKAP1 G kinase-anchoring protein 1 1 RNS(0.714)ES(0.286)DQCR;RNS(0.999)ES(0.001)DQCR;RNS(0.985)ES(0.015)DQCR 73.632 0.00092729 9301900.0 1642.01 919.76 804.34 417.59999999999997 360.53999999999996 84.42 208.52 130.63 368.67 1681.75 1793.68 True False 1919.141144709817 966.5718553874065 918.4075067699359 519.9120187467761 307.5050436044501 93.35326836653933 246.40538487340118 149.1472025375969 285.1668336450145 1301.8415069738996 1348.2597529503914 1.4234209250184677 0.7169032920194058 0.6811799467870998 0.3856171020525197 0.22807551952176727 0.06923982427143935 0.1827580956371302 0.1106220090091829 0.2115073397548099 0.9655717335810737 1.0 10.396882754618309 -5.05109347629417 1.3950206728494505 0.474472508514989 2.223173958820351 0.46471336534489727 0.3109459549147663 1.8259784429158068 2.1521753593391524 0.055743356872987156 5.1226618256124725 8.890097493644427e-06 5.05109347629417 1.7487014503053622 RNS(ph)ESDQCR ddPTM_A549_PD325901_60min_R1 5 RNSESDQCR 9 1 Q5VSY0-2;Q5VSY0 Q5VSY0-2 GKAP1 G kinase-anchoring protein 1 1 RNS(0.958)ES(0.042)DQCR;RNS(0.991)ES(0.009)DQCR;RNS(0.997)ES(0.003)DQCR;RNS(0.859)ES(0.141)DQCR;RNS(0.982)ES(0.018)DQCR 68.786 0.0034599000000000006 18891200.0 1753.75 1644.43 1494.74 1322.95 1389.7 1193.3100000000002 927.517 1098.68 1144.17 2127.46 2322.25 True False 1931.7894089574872 1783.0118872275868 1596.1820450018067 1404.665616862555 1292.092266204733 1183.59207900067 962.8141669917769 1076.7659655022142 1096.0845138583538 1993.1318125254047 2036.6279719556383 0.9485234591482697 0.8754725515801883 0.7837376619496684 0.6897016225863519 0.6344272414976324 0.5811528149955366 0.4727491619724984 0.5287003715598915 0.5381859274012901 0.9786430511467114 1.0 10.991966753904073 -5.775836200942556 2.031390982940096 0.7078279711289353 0.9408842802926457 0.22293090436068752 0.16447277271570138 0.5867543088157167 4.475166317123932 0.029729055708416052 0.17270529896425718 1.6755747187510602e-06 5.775836200942556 0.23305630916371045 RNS(ph)FSENEK ddPTM_A549_MK2206_60min_R1 4 RNSFSENEK 9 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 RNS(0.972)FS(0.028)ENEK;RNS(0.999)FS(0.001)ENEK;RNS(0.993)FS(0.007)ENEK;RNS(1)FSENEK 237.92 1.8252e-42 1362750000.0 40847.3 43091.4 40705.0 38705.2 58840.0 47933.7 47065.2 50720.7 68099.0 61211.0 65210.0 True False 47741.325619396535 45284.56820174925 46477.581076497816 48187.97573754243 50184.71394487669 53006.01231818509 55616.337618183374 57910.51455062918 52674.68523175696 47383.392587114235 49016.55729555718 0.9739836547787042 0.9238626843720379 0.9482016616599572 0.9830958842535877 1.02383187873183 1.0813899474533173 1.1346438976289426 1.1814480197261457 1.0746304542390077 0.9666813664901968 1.0 15.580981538845087 -6.73564534122712 2.173123241779809 1.0591701629105355 0.9474592583392392 0.4741864427740995 0.056434923525296485 0.24798322335750655 2.384931137295978 0.00923529956933975 0.021215689980258922 1.838038731884505e-07 6.73564534122712 -0.11171090457129629 RNS(ph)FSENEK ddPTM_A549_PD325901_60min_R1 5 RNSFSENEK 9 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 RNS(0.999)FS(0.001)ENEK;RNS(0.998)FS(0.002)ENEK;RNS(1)FSENEK;RNS(1)FSENEK;RNS(0.993)FS(0.007)ENEK 207.25 6.1836e-18 2101670500.0 74069.3 72070.5 77261.5 72774.0 84929.1 72875.59999999999 74217.0 78535.4 78915.90000000001 80937.9 82170.40000000001 True False 81588.76080906343 78144.13396644178 82504.93000114198 77269.08469825439 78963.97300548932 72282.12527542819 77041.36854810064 76968.94983717061 75599.33916043467 75827.46718105159 72063.96172108233 1.1321714607482454 1.0843718843670052 1.1448847389277677 1.0722292093420849 1.095748431249352 1.003027359988759 1.0690692921696832 1.0680643694704524 1.0490588826220202 1.0522245151402527 1.0 16.136990345750032 -2.000000000283124 0.0920449584401713 0.9527064820359051 1.4428333631247001 0.49639664235657255 0.03062943913365753 53.69783221522939 0.3437247867597696 0.2275290549514876 3.331971030802707 0.009999999993480824 2.000000000283124 0.490126881088795 RNS(ph)FSENEKHTHR ddPTM_A549_MK2206_60min_R1 1 RNSFSENEKHTHR 13 2 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 RNS(0.997)FS(0.003)ENEKHTHR 163.41 2.1146e-19 15649000.0 946.5 820.3 1078.7 883.7 786.48 455.77 500.09 281.71 896.35 2166.3 2648.2 True False 1106.2460602967346 862.0497662154141 1231.675880290338 1100.206539670801 670.7898338437561 503.99927888435957 590.9498797301895 321.64325520069224 693.3281561768213 1676.9313254393085 1990.5788533981665 0.5557408883392058 0.43306486690732576 0.618752619715473 0.5527068358998244 0.33698229673174424 0.2531923204267793 0.2968733837001053 0.16158277510665153 0.3483047933485396 0.8424340098743526 1.0 10.958972307135424 -10.616061978157836 0.9128704408856166 0.9973489532910108 0.39385728715715335 0.673117491973416 0.139738200354848 0.2559032541214385 0.3830074052431106 0.09986504159513342 0.027662430590726695 2.420683566376047e-11 10.616061978157836 -0.6034916661338574 RNS(ph)FSENEKHTHR ddPTM_A549_PD325901_60min_R1 4 RNSFSENEKHTHR 13 2 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 RNS(1)FSENEKHTHR;RNS(0.991)FS(0.009)ENEKHTHR;RNS(0.991)FS(0.009)ENEKHTHR;RNS(1)FSENEKHTHR 158.86 4.490399999999999e-19 69196500.0 4953.42 5145.77 4741.08 5961.32 5798.82 10525.4 6963.219999999999 7800.799999999999 7539.3 6860.3 8566.699999999999 True False 5456.287551884927 5579.422096981388 5062.838199230077 6329.537197259976 5391.530888042977 10439.684632085244 7228.2091475201905 7645.206924390789 7222.449439621984 6427.139487213875 7513.050208785598 0.7262413267922078 0.742630748089096 0.6738725362582701 0.8424723675955675 0.7176221026365879 1.3895401124668783 0.962087161226166 1.0175902878235326 0.9613205341255684 0.8554634014954562 1.0 12.87518302831218 RNS(ph)FTPLSSSNTIR ddPTM_A549_MK2206_60min_R1 2 RNSFTPLSSSNTIR 14 1 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 RNS(1)FTPLSSSNTIR;RNS(1)FTPLSSSNTIR 197.09 1.2470999999999997e-31 107716000.0 2888.2 3209.1 2683.8999999999996 2849.8 5220.9 4343.8 3806.6000000000004 4315.2 7066.7 6493.799999999999 6526.6 True False 3375.657550289517 3372.4294828256575 3064.517377501839 3548.0011279323826 4452.912526084411 4803.458032818922 4498.209946571499 4926.892814745754 5466.103733201029 5026.846069860031 4905.865095003581 0.6880860938731241 0.6874280921952657 0.624664013004133 0.7232162033044639 0.9076712139148541 0.979125585355179 0.9169045335455185 1.0042862409248858 1.114197726058148 1.0246604773090202 1.0 12.260291846840257 -6.987960600003667 1.0046943714918222 1.0466063993935475 0.6503983173098442 0.9012947495932176 0.05023744202897805 0.126307486373221 0.2481173213804235 0.010076770504107206 0.027697201313896778 1.0281095658915752e-07 6.987960600003667 -0.3962080820837033 RNS(ph)FTPLSSSNTIR ddPTM_A549_PD325901_60min_R1 2 RNSFTPLSSSNTIR 14 1 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 RNS(1)FTPLSSSNTIR;RNS(1)FTPLSSSNTIR 224.4 2.5142e-47 247760000.0 7099.1 6268.5 7127.1 6183.4 7543.0 7316.0 7207.4 7640.8 7803.8 6712.0 7971.4 True False 7819.795405918793 6796.768494302664 7610.787864733919 6565.334574479702 7013.2057019373215 7256.420921612065 7481.681551040608 7488.398249908355 7475.833424445517 6288.203174522917 6990.968334867982 1.1185568338104142 0.972221324534295 1.088660039664969 0.9391166230484267 1.0031808708041816 1.037970789457037 1.070192452986113 1.0711532210150922 1.0693559270121757 0.8994752762875536 1.0 12.77127658506335 -7.478281590060039 19.884264677640417 1.0402556302606056 1.0203177472365044 0.0 0.0658230918645666 148.0229592673964 65996.21787469745 0.0076517537647294905 0.012230302703400772 3.324439317151926e-08 7.478281590060039 -0.019937883024101266 RNS(ph)IEVAGLSHGLEGLR ddPTM_A549_MK2206_60min_R1 1 RNSIEVAGLSHGLEGLR 17 1 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RNS(1)IEVAGLSHGLEGLR 161.41 9.268100000000001e-23 21177000.0 2904.9 2733.2 1809.7 1681.8 3470.7 3274.1 2538.7 2749.2 3603.4 3793.0 4179.9 True False 3395.176102013719 2872.308205558906 2066.3426722549584 2093.84107549887 2960.1646276084875 3620.563088828314 2999.948928534929 3138.907519071894 2787.2356534473797 2936.1586656470945 3141.915470628729 1.0806070799015832 0.9141901596048121 0.6576697214077062 0.6664218356835269 0.9421528539773633 1.1523426147756302 0.9548152891378102 0.9990426376568835 0.887113507509362 0.9345123040689377 1.0 11.617428651880706 -6.972241869741811 24.967711461953755 0.9666999812734305 0.8210687377336319 0.2514486298826043 0.12459975136364666 256.1995801741173 230443.6720655428 0.0188119968088429 0.03555083183173937 1.066002271859744e-07 6.972241869741811 -0.14563124353979862 RNS(ph)IEVAGLSHGLEGLR ddPTM_A549_PD325901_60min_R1 4 RNSIEVAGLSHGLEGLR 17 1 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR 157.3 8.2177e-23 61892300.0 6944.7 6574.61 7384.16 7357.570000000001 7312.43 6970.48 6822.920000000001 7140.709999999999 8660.45 7813.43 8556.88 True False 7649.7208315820735 7128.675458295799 7885.293502161272 7812.030388646149 6798.830143314011 6913.714721935279 7082.569954245083 6998.282937271371 8296.481404026134 7320.088696351698 7504.438006531486 1.0193595876099104 0.9499279562428736 1.0507507018244815 1.0409880635761064 0.9059745896223875 0.921283474647659 0.9437841911787092 0.932552568384257 1.1055433327326167 0.9754346281467926 1.0 12.873528319792744 -8.753429490115222 24.998713528437758 1.049839908240989 0.9702190798874073 0.13626392346053007 0.05566358192730767 176.49254351091858 550829.7482741954 0.010210459978273235 0.011477370940516042 1.7642921828993418e-09 8.753429490115222 -0.07962082835358175 RNS(ph)ISR ddPTM_A549_PD325901_60min_R1 3 RNSISR 6 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RNS(1)ISR;RNS(1)ISR;RNS(0.999)IS(0.001)R 75.696 0.036685 42964200.0 3436.5 3449.1000000000004 3878.18 2594.7 3666.7999999999997 2955.11 2583.35 2804.4700000000003 3181.28 3419.9 5053.4 True False 3785.370950182409 3739.767761617501 4141.376616190848 2754.9687260087458 3409.2566177732706 2931.044563923599 2681.6607979133632 2748.5326457858464 3047.5818647992055 3203.9669303562164 4431.86383614194 0.8541261848598849 0.8438363406203094 0.9344548409673233 0.6216275652563871 0.7692602353823945 0.6613570886408718 0.6050864595713353 0.6201753364739022 0.6876524138548917 0.7229389369384052 1.0 12.113697841604134 -10.708997491292235 1.005633697199713 0.9974005145298667 0.7304145835719201 0.0 0.13048307590462502 0.39368913375202075 0.7181799180221821 0.07292861691683841 0.01976445271652042 1.9543507450754717e-11 10.708997491292235 -0.26698593095794654 RNS(ph)KHQEIFEK ddPTM_A549_MK2206_60min_R1 2 RNSKHQEIFEK 11 2 A0A096LNH6;Q14185 A0A096LNH6 DOCK1 Dedicator of cytokinesis protein 1 1 RNS(1)KHQEIFEK;RNS(1)KHQEIFEK 97.223 5.7448e-05 55339000.0 5569.9 5357.799999999999 5245.8 4369.4 5820.2 4622.6 4706.6 5235.799999999999 6468.700000000001 7031.1 6589.299999999999 True False 6509.962949019311 5630.489134985913 5989.733320503431 5439.903196149817 4964.05628997232 5111.76046376646 5561.728296782806 5977.9906839650175 5003.54977839126 5442.769626688973 4952.994954571613 1.314348794765199 1.1367847507676083 1.209315449630109 1.0983058222437292 1.002233261996461 1.032054445976834 1.1229020719371685 1.2069446342656445 1.0102069201126451 1.0988845489667416 1.0 12.27408543601636 -2.0000000000000004 0.25445915453498735 1.0035815518254179 2.761965004319294 0.4054363709565624 0.0742031739343948 24.92780792140823 0.304150354601544 0.03279143332476363 19.180142553797943 0.00999999999999999 2.0000000000000004 1.758383452493876 RNS(ph)KHQEIFEK ddPTM_A549_PD325901_60min_R1 2 RNSKHQEIFEK 11 2 A0A096LNH6;Q14185 A0A096LNH6 DOCK1 Dedicator of cytokinesis protein 1 1 RNS(1)KHQEIFEK;RNS(1)KHQEIFEK 143.46 5.4529e-12 85217000.0 13276.1 12115.400000000001 13600.7 12652.8 15485.6 12966.900000000001 12618.5 12472.6 14911.4 14267.5 15705.5 True False 14623.879898651727 13136.407277000002 14523.725289653099 13434.334719406277 14397.944878419808 12861.301865561987 13098.703922608149 12223.82420843458 14284.725713790307 13366.647615093216 13773.823065367316 1.061715387895593 0.9537226676034468 1.0544440146157623 0.9753526421567994 1.0453121700555146 0.9337496063747357 0.9509853481088576 0.8874677822143636 1.0370922906442437 0.9704384579109415 1.0 13.749641429358672 RNS(ph)LDGGGR ddPTM_A549_MK2206_60min_R1 3 RNSLDGGGR 9 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 RNS(1)LDGGGR;RNS(1)LDGGGR;RNS(1)LDGGGR 96.82 0.00036826 411432000.0 1689.02 2250.33 1696.99 1710.13 2568.7200000000003 1659.45 1540.5500000000002 1635.1599999999999 2634.8999999999996 3019.13 3628.2 True False 1974.0852834256627 2364.862185063431 1937.6486994473896 2129.1119267706526 2190.8646907628095 1835.0518975462405 1820.4479937978053 1866.948937467479 2038.0993570706817 2337.1064361231493 2727.2178067741215 0.7238458470468486 0.8671335964400652 0.7104854972105544 0.7806900943086258 0.8033332304156025 0.6728659122818006 0.6675110397402086 0.684561729110955 0.7473181467238362 0.8569562835494925 1.0 11.41321420904609 -10.478335404788034 0.8139220694599976 0.9997042991978564 0.7407156172912055 0.4840237489622097 0.06996757630541102 0.26555767890790566 0.3178661161567874 0.04068201557279556 0.011858444017392285 3.324027401455901e-11 10.478335404788034 -0.2589886819066509 RNS(ph)LDGGGR ddPTM_A549_PD325901_60min_R1 4 RNSLDGGGR 9 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 RNS(1)LDGGGR;RNS(1)LDGGGR;RNS(1)LDGGGR;RNS(1)LDGGGR 100.88 0.00060825 607056000.0 3616.7 3292.82 3547.26 3324.8199999999997 4212.72 4225.95 3956.7599999999998 3391.84 3756.79 4431.969999999999 5017.88 True False 3983.8647215261813 3570.3174975527936 3787.998395007233 3530.186580185919 3916.83308029503 4191.535264309258 4107.336667022153 3324.1870903529943 3598.905180889138 4152.134657835265 4400.712570962108 0.9052771925650229 0.8113044058163134 0.8607693263136883 0.8021852196118617 0.8900451954394991 0.9524674008402421 0.9333344545436161 0.7553747346026379 0.8178005545366318 0.9435141675084457 1.0 12.103521430993665 -10.830578006457609 1.083710137923511 0.9997991633224059 0.8562991436094182 0.34278202185674345 0.05876982119597857 0.3813020824085898 0.7969333536109116 0.04110631538152828 0.010196186452502464 1.4771411388294714e-11 10.830578006457609 -0.14350001971298776 RNS(ph)LEGYSR ddPTM_A549_MK2206_60min_R1 2 RNSLEGYSR 9 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 RNS(1)LEGYSR;RNS(1)LEGYSR 74.46 0.00089959 63658000.0 1241.3400000000001 1243.28 1304.5700000000002 1258.34 1687.03 1431.26 1391.55 1213.8600000000001 1707.01 1758.05 2202.8999999999996 True False 1450.8478441508166 1306.5576415217606 1489.577642672073 1566.63335648903 1438.8701217951282 1582.7149832065031 1644.376622485044 1385.9283722903422 1320.3749605348314 1360.905283981247 1655.859133052951 0.8761903806852521 0.7890512033549775 0.8995799298009726 0.9461151164474885 0.8689568412394149 0.9558270698355904 0.9930655269287694 0.8369844660246368 0.7973957048510651 0.8218726199686506 1.0 10.693364230029411 -11.090281772736766 1.4426374913235727 0.9995255425220553 0.8760118097111302 0.0 0.0800402131853479 0.41261367060229065 1.54390301365838 0.04832645990139375 0.010762580064933781 8.123033181324423e-12 11.090281772736766 -0.12351373281092504 RNS(ph)LEGYSR ddPTM_A549_PD325901_60min_R1 2 RNSLEGYSR 9 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 RNS(1)LEGYSR;RNS(1)LEGYSR 122.46 4.7308e-05 57715000.0 5176.0 5378.0 5012.6 5393.9 6028.6 5057.700000000001 5161.3 5048.1 5871.3 6005.9 6127.799999999999 True False 5701.463709630192 5831.222934092641 5352.785179212476 5727.068952564293 5605.171933540949 5016.511768075093 5357.716095871728 4947.411685342163 5624.54967899574 5626.686449026693 5374.119447324688 1.0609112368107971 1.0850564434319572 0.9960301834893468 1.0656757834839916 1.0429935524286276 0.9334574374919007 0.9969477136461629 0.9205995017109369 1.046599305081639 1.046996908828987 1.0 12.391812672285564 -6.046290088858013 0.99339292915253 1.0081469893588166 1.0744055222372793 0.22803597189708358 0.04493981156318658 1.0495000296278196 1.5389505032717055 0.0071483351845106295 0.055012147517127005 8.988969588870718e-07 6.046290088858013 0.06625853287846262 RNS(ph)LGGDVLFVGK ddPTM_A549_MK2206_60min_R1 2 RNSLGGDVLFVGK 13 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RNS(1)LGGDVLFVGK;RNS(1)LGGDVLFVGK 89.866 7.8051e-05 11908100.0 1782.9699999999998 1713.78 1087.1399999999999 1407.96 2408.5 1498.28 1431.0700000000002 1494.81 2016.49 1881.71 2530.5 True False 2083.891746568693 1801.0040818537775 1241.3127992016662 1752.910263205726 2054.212840520657 1656.826995122228 1691.076894929878 1706.7038951636318 1559.7582346728373 1456.6304040956475 1902.1070117529134 1.0955701933132844 0.9468468759778331 0.6525988241101729 0.921562379179869 1.0799670196407976 0.871048255899838 0.8890545508117561 0.8972701770289964 0.8200160269823201 0.7657983463050637 1.0 10.893382698569468 -8.556391075050179 0.004883685574076032 1.8229491882920728 7.465862179143086e-07 0.0 0.12713291287854545 24113.50453115523 95.55333318871831 17819.474283093314 17842.80074407748 2.7772113082581727e-09 8.556391075050179 -1.8229484417058548 RNS(ph)LGGDVLFVGK ddPTM_A549_PD325901_60min_R1 2 RNSLGGDVLFVGK 13 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RNS(1)LGGDVLFVGK;RNS(1)LGGDVLFVGK 108.18 3.1675e-05 21136500.0 2976.3999999999996 3158.7 3087.8 3296.5 4138.2 3786.3 3152.2 3715.5 3568.3 3688.8999999999996 3526.0 True False 3278.561936890126 3424.8947344586136 3297.356676449801 3500.1173181053027 3847.5471080149864 3755.465628143766 3272.158695950025 3641.391437746638 3418.3367600975084 3455.9822244483876 3092.324353155593 1.0602257598057219 1.1075470562988148 1.0663036279117941 1.1318726363660956 1.2442249481651946 1.2144475156079484 1.0581550711557532 1.1775580508010888 1.1054263297474707 1.1176001705389333 1.0 11.594475935796456 -10.096091474696582 0.7313934906306456 1.0040171078724283 1.1336829688132197 0.058500004018747 0.06718570876968245 0.5034777428882934 0.5298528369898922 0.033091569291500034 0.012913138067202203 8.015092251035798e-11 10.096091474696582 0.12966586094079147 RNS(ph)LILK ddPTM_A549_MK2206_60min_R1 2 RNSLILK 7 1 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 RNS(1)LILK;RNS(1)LILK 92.838 0.0051132 9372800.0 2154.88 2090.03 2366.52 1936.1 2972.3 2138.27 2347.02 2740.7 3008.0 3087.4 2786.6 True False 2518.5710622421852 2196.4035997600913 2702.1281210945463 2410.4445869148326 2535.0786073820013 2364.540312131249 2773.443153681039 3129.2026180417356 2326.6928027889535 2389.9541957075767 2094.610313752486 1.2024055480420963 1.0485977202247434 1.2900385830019592 1.150784263348981 1.2102865104490095 1.1288688385646226 1.3240855043401494 1.4939306836677326 1.1107998406733197 1.1410018274119844 1.0 11.03246615115955 -8.982153617435136 15.396319400738879 1.0488631165460682 1.2282605844304104 0.24795959152810865 0.11425982151476617 1.507996249240197 1300.8400881108475 0.020680581407249064 0.021139187052163118 1.0419488089713533e-09 8.982153617435136 0.1793974678843422 RNS(ph)LILK ddPTM_A549_PD325901_60min_R1 2 RNSLILK 7 1 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 RNS(1)LILK;RNS(1)LILK 113.62 0.0031334 16570100.0 3456.0 3568.3 3754.8 3172.2 5119.3 3911.7 3430.3 3708.5 3784.5 4251.2 3777.2999999999997 True False 3806.8505758272677 3869.0131639499405 4009.623307446636 3368.139589411084 4759.738028626241 3879.844412120002 3560.841943632184 3634.531058238031 3625.450625953258 3982.7785064856707 3312.716046277543 1.1491629595313422 1.1679277999988866 1.210373376840493 1.0167305444714527 1.4368083355573742 1.1711973975190944 1.0749010461169641 1.0971453657557242 1.0944042819568345 1.2022698145109867 1.0 11.693798830917133 -8.901645521465456 0.5682282061644988 1.0154691065220347 1.1890376084278722 0.02127975453396791 0.112052281570027 0.617695612050925 0.45275858393625334 0.03455367756711142 0.030549803689712277 1.254164427599848e-09 8.901645521465456 0.1735685019058375 RNS(ph)LILKPKPDPAQQTDSQNSDTEQYFR ddPTM_A549_MK2206_60min_R1 4 RNSLILKPKPDPAQQTDSQNSDTEQYFR 28 3 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR 258.89 4.722199999999999e-139 207726000.0 7653.0 8234.7 7638.3 6447.200000000001 10896.5 8013.4 7475.700000000001 7600.5 11501.5 10200.6 11218.5 True False 8944.63930211401 8653.811056752495 8721.525796256308 8026.764289425807 9293.639284506271 8861.372669135582 8833.937922971827 8677.894150555041 8896.428614121394 7896.277375375621 8432.636835151176 1.0607167694959385 1.0262283584512215 1.0342584373965813 0.9518688455746722 1.1021035847015295 1.0508424401958394 1.0475890395454766 1.029084297141971 1.0549996149528125 0.9363948109872635 1.0 13.041768108494558 -5.256442503558005 22.61039574764271 1.030182261132451 1.060716815548918 0.034563235752219534 0.04511794324473516 348.4457695717358 1576458.478571285 0.004866336503615198 0.05300449842630502 5.540608914541106e-06 5.256442503558005 0.03053455441646702 RNS(ph)LILKPKPDPAQQTDSQNSDTEQYFR ddPTM_A549_PD325901_60min_R1 5 RNSLILKPKPDPAQQTDSQNSDTEQYFR 28 3 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(0.971)LILKPKPDPAQQT(0.023)DS(0.006)QNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR 263.62 1.1573999999999998e-152 310930200.0 13946.8 14846.2 14873.3 14798.5 17529.399999999998 14779.7 14958.599999999999 16604.8 16040.4 15030.9 16745.1 True False 15362.668868908497 16097.341376743436 15882.69157841857 15712.569735168001 16298.195417147037 14659.339023393923 15527.857708659998 16273.604237786387 15366.277769993561 14081.846408810563 14685.558855934698 1.046107200932307 1.0961340684858045 1.0815176823863322 1.0699333875753914 1.1098110447843559 0.9982145839461751 1.0573555872805558 1.1081365304126598 1.0463529458249914 0.9588907406897788 1.0 13.842110547721193 -10.056171643336942 0.4164657946523881 0.989389457223671 1.075353902379144 0.49809865709365286 0.03308863694291767 1.0112006766056223 0.3195253984047249 0.03613857011206863 0.010203559111345704 8.786751752161017e-11 10.056171643336942 0.08596444515547308 RNS(ph)LPQIPMLNLEAR ddPTM_A549_MK2206_60min_R1 5 RNSLPQIPMLNLEAR 15 1 Q14289;H0YB74;Q14289-2 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR 79.508 0.00011804 38418700.0 1513.8100000000002 1989.8799999999999 1272.79 1604.8400000000001 2239.73 1427.57 1324.5249999999999 1906.72 2194.02 2112.76 2743.88 True False 1769.3041188988905 2091.1563925353257 1453.2907607997943 1998.025872044005 1910.2686839523892 1578.6345098557283 1565.1740475706958 2177.0033990851 1697.0779731299929 1635.4860486244543 2062.498868764505 0.857844891793203 1.0138945646006523 0.7046262098899266 0.9687403480811986 0.9261913850632529 0.7653989700374356 0.7588726817136532 1.0555173784842784 0.8228261352436961 0.7929633675892179 1.0 11.010177612734099 -10.963952608340973 1.0790990458531067 1.004289339014648 0.8718001692400925 0.0 0.12125470379923842 0.7844112730802469 1.532599650266242 0.0828668843851437 0.016753179577015196 1.0865441844650722e-11 10.963952608340973 -0.13248916977455538 RNS(ph)LPQIPMLNLEAR ddPTM_A549_PD325901_60min_R1 7 RNSLPQIPMLNLEAR 15 1 Q14289;H0YB74;Q14289-2 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR 94.463 7.082e-06 68207600.0 3607.0400000000004 3840.07 3302.92 3573.51 3950.56 3866.8499999999995 3714.9800000000005 3946.91 3936.09 4633.650000000001 4452.16 True False 3973.2240454374987 4163.686175626836 3527.07601327145 3794.2375966699506 3673.086294292126 3835.359655650031 3856.3555968150586 3868.1857837590032 3770.669825421685 4341.080548216347 3904.572544567556 1.0175823345798651 1.066361587114007 0.9033193705617486 0.9717421185960253 0.9407140608521929 0.9822738883379638 0.9876511584297283 0.9906809873825554 0.9657061771506409 1.1117940564982216 1.0 11.930948901764939 -11.062404487078425 1.3736147016603315 0.9999966908280676 0.9782888819891136 0.08430564804092289 0.0518132660740043 1.3991926114244722 4.7114984382939396 0.027881361039218875 0.006184215569688781 8.661547929187857e-12 11.062404487078425 -0.021707808838954068 RNS(ph)LQHHQDDTK ddPTM_A549_MK2206_60min_R1 2 RNSLQHHQDDTK 12 1 Q6ZU80;H0YJH2 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK 89.484 6.0587e-05 64250000.0 1117.88 1032.08 1446.1100000000001 1096.73 1318.35 1160.1 1268.16 1735.0700000000002 2263.32 1805.9299999999998 1730.54 True False 1306.550814458017 1084.6084636298972 1651.1901429931024 1365.4288992340798 1124.4224614076845 1282.8610119879436 1498.5682566710743 1981.0214859290243 1750.681633779353 1397.9691587271432 1300.7991575257408 1.0044216333467009 0.8338016344451964 1.2693659381928282 1.049684642963078 0.8644089711331427 0.9862099037856716 1.1520366138009432 1.522926482899281 1.3458508361193413 1.0747002338056784 1.0 10.345182512813565 -7.838522599211969 5.240927231152796 1.2007834880496935 1.0020190508277118 0.29905816609421165 0.16597693315787873 0.26863530110636613 13.077037131079237 0.03062996110071877 0.04283147859501644 1.450365300249859e-08 7.838522599211969 -0.19876443722198167 RNS(ph)LQHHQDDTK ddPTM_A549_PD325901_60min_R1 2 RNSLQHHQDDTK 12 1 Q6ZU80;H0YJH2 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 RNS(1)LQHHQDDTK;RNS(0.995)LQHHQDDT(0.005)K 102.08 4.770899999999999e-05 106553000.0 3909.4 3986.3 3911.3999999999996 4027.0 5524.2 4211.5 4438.5 5035.2 5170.4 4796.7 5030.5 True False 4306.279410051829 4322.239490921069 4176.851125158934 4275.738644019431 5136.199249455414 4177.202940318374 4607.409546340394 4934.768985962012 4953.106068550334 4493.835543390054 4411.7803909668755 0.976086529345146 0.9797041348138856 0.9467495557374164 0.9691639803227763 1.1642010241424952 0.946829300223375 1.0443424509012436 1.1185436600756367 1.1227000506851663 1.0185991017574643 1.0 12.10714526309174 -6.5873088705355025 24.999738586060378 1.0606192193653647 0.9669346886888517 0.363264510071456 0.05818948228076753 53.25302500678314 20662.436818747043 0.009070278197891283 0.018881291203060854 2.586372830752331e-07 6.5873088705355025 -0.09368453067651306 RNS(ph)LTGEEGQLAR ddPTM_A549_MK2206_60min_R1 8 RNSLTGEEGQLAR 13 1 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 RNS(1)LTGEEGQLAR;RNS(0.982)LT(0.018)GEEGQLAR;RNS(0.741)LT(0.259)GEEGQLAR;RNS(0.999)LT(0.001)GEEGQLAR;RNS(0.998)LT(0.002)GEEGQLAR;RNS(1)LTGEEGQLAR;RNS(1)LTGEEGQLAR;RNS(0.968)LT(0.032)GEEGQLAR 234.36 5.528699999999999e-48 2035210000.0 32103.300000000003 33760.299999999996 30926.600000000002 30777.899999999998 44664.5 33097.39 31187.25 32147.5 50593.59999999999 48024.2 50834.799999999996 True False 37521.552189671595 35478.555068099784 35312.45691979896 38318.48688167243 38094.4112167054 36599.73384153059 36853.5696306972 36704.50657258972 39134.23038137739 37175.49986574454 38211.11619089389 0.9819538377843402 0.928487796348506 0.9241409422165556 1.002809933377558 0.9969457847395647 0.9578294875943115 0.9644724704346583 0.9605714313400976 1.0241582628958505 0.9728975118136919 1.0 15.221704780650981 -8.754635025587824 24.95464280794441 1.011408069123827 0.9642107110301689 0.21796901979431027 0.02626408788372227 108.58795005168265 398240.7531361507 0.0042943847360871566 0.004815323605685201 1.7594015669010583e-09 8.754635025587824 -0.047197358093658104 RNS(ph)LTGEEGQLAR ddPTM_A549_PD325901_60min_R1 11 RNSLTGEEGQLAR 13 1 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 RNS(1)LTGEEGQLAR;RNS(1)LTGEEGQLAR;RNS(1)LTGEEGQLAR;RNS(0.987)LT(0.013)GEEGQLAR;RNS(0.993)LT(0.007)GEEGQLAR;RNS(0.897)LT(0.103)GEEGQLAR;RNS(1)LTGEEGQLAR;RNS(0.957)LT(0.043)GEEGQLAR;RNS(0.999)LT(0.001)GEEGQLAR;RNS(0.996)LT(0.004)GEEGQLAR;RNS(0.999)LT(0.001)GEEGQLAR 229.69 9.2544e-47 2549728600.0 46649.3 44371.96 50260.299999999996 50054.4 57051.50000000001 57513.9 51494.3 52662.700000000004 59450.100000000006 56607.9 61537.7 True False 51385.10259460043 48111.34079260718 53671.26619773627 53146.14660620968 53044.39945699021 57045.52586707275 53453.94376526216 51612.30113541104 56951.61904029173 53033.66753323535 53968.95301962079 0.9521233916826034 0.8914632969647561 0.9944841097477601 0.9847540786438459 0.98286878824026 1.0570063467107367 0.9904573050699834 0.9563331924680293 1.0552663309882362 0.9826699345817324 1.0 15.719842079310395 -6.127725425711692 0.9559710423791474 1.0196597461460697 0.9157025122705509 0.3299886624456375 0.0358622784853778 0.5123478442606632 0.710496712179749 0.005636709507571336 0.040048372572035355 7.452029651676106e-07 6.127725425711692 -0.1039572338755188 RNS(ph)PAFLSTDLGDEDVGLGPPAPR ddPTM_A549_MK2206_60min_R1 2 RNSPAFLSTDLGDEDVGLGPPAPR 24 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RNS(1)PAFLSTDLGDEDVGLGPPAPR;RNS(0.999)PAFLSTDLGDEDVGLGPPAPR 183.49 1.4058e-50 11646000.0 3297.7 3371.3 3443.9 3128.1000000000004 5279.7 4332.9 3795.5 4193.7 6091.299999999999 5628.6 6001.0 True False 3854.271138975742 3542.884770013444 3932.2968055361953 3894.484640425745 4503.063123976295 4791.404602053754 4485.093220252226 4788.16981766761 4711.630275807297 4357.095350767525 4510.786080825619 0.8544566445656598 0.7854251357814295 0.8717542208998876 0.8633716098797859 0.9982878911322901 1.0622105584702817 0.9943041279029817 1.0614934363704565 1.0445253202840683 0.9659281714308288 1.0 12.139163154082265 -6.748377137394127 2.923464435795276 1.02569206340386 0.8353462888437543 0.8630967135574459 0.03357992267419545 0.056740739168032475 0.9951848657960538 0.004321795511913075 0.009290959650771015 1.7849368786272676e-07 6.748377137394127 -0.1903457745601057 RNS(ph)RDGDPLPSSLSCK ddPTM_A549_MK2206_60min_R1 2 RNSRDGDPLPSSLSCK 16 2 H3BP35;P53602 H3BP35 MVD Diphosphomevalonate decarboxylase 1 RNS(1)RDGDPLPSSLSCK;RNS(0.997)RDGDPLPS(0.001)S(0.001)LSCK 80.142 6.1682e-05 21603400.0 5198.2 5587.0 4492.0 4744.8 6146.9 5586.4 4271.8 4742.3 6388.400000000001 6851.8 7100.1 True False 6075.529076211816 5871.354435993567 5129.03314569778 5907.276213002166 5242.699152749194 6177.549140047796 5047.930764925165 5414.535547684649 4941.437600178505 5303.973621218234 5336.949217208796 1.1383898982252814 1.1001330904670408 0.9610421491663068 1.1068638603407301 0.9823400859510343 1.1575057000970737 0.9458457555954062 1.0145375808009713 0.9258918155422993 0.9938212647997038 1.0 12.38179956834552 -7.790303380726808 24.999706660342063 0.9673122648355583 1.067691118444765 0.3886344972094766 0.06066952342035753 157.32068216703365 136258.1680475773 0.009174785008719318 0.012677882813030969 1.6206775614143437e-08 7.790303380726808 0.10037885360920673 RNS(ph)RDGDPLPSSLSCK ddPTM_A549_PD325901_60min_R1 1 RNSRDGDPLPSSLSCK 16 2 H3BP35;P53602 H3BP35 MVD Diphosphomevalonate decarboxylase 1 RNS(1)RDGDPLPSSLSCK 75.358 0.00016626 10166000.0 4213.1 4023.6 4015.5 4096.7 4037.3 4091.7 4334.9 5068.5 4008.9 4399.3 5196.6 True False 4640.8108104797075 4362.682892825427 4288.01597716309 4349.743854719246 3753.733975928883 4058.378551798811 4499.8669916483 4967.40479133867 3840.4198743252805 4121.527447210768 4557.451143961533 1.0182908524710403 0.9572637763996292 0.940880295084362 0.9544246811032759 0.8236476612376751 0.8904930461352337 0.9873648338744061 1.0899523954130177 0.8426683584778975 0.9043492331610951 1.0 12.154011475267207 -5.181950407235174 1.624734244034452 0.9325965343139434 1.0614301041705505 0.09695436982225314 0.07091742953163316 2.5531246410918182 5.446386588362076 0.011430681700996193 0.5468140122154462 6.577329406184754e-06 5.181950407235174 0.1288335698566071 RNS(ph)RTEEPTVASESVENGHR ddPTM_A549_MK2206_60min_R1 1 RNSRTEEPTVASESVENGHR 20 2 Q14686;A0A0D9SFT8;F6M2K2 Q14686 NCOA6 Nuclear receptor coactivator 6 1 RNS(0.421)RT(0.421)EEPT(0.158)VASESVENGHR 94.449 4.7151e-07 3258100.0 169.53 0.0 189.77 226.36 91.337 195.11 131.82 0.0 155.45 348.27 282.52 True False 198.14251938944042 0.0 216.6822395501041 281.81821016168635 77.90144829339225 215.75641069646392 155.76998769428226 0.0 120.24082320264054 269.5955651159802 212.36248684466813 0.9330391743546078 0.0 1.0203414113745788 1.3270621113408858 0.3668324356663473 1.015981748482152 0.7335099056747236 0.0 0.566205571375656 1.2695065363082465 1.0 7.730385130949982 -10.786352647330421 1.1763083948058637 0.989728017495051 0.6541822749568499 0.14591415385469364 0.40844024566525355 0.91617139514761 2.352128229568233 0.23187890496304348 0.06606778646793558 1.6354879650839296e-11 10.786352647330421 -0.33554574253820113 RNS(ph)RTEEPTVASESVENGHR ddPTM_A549_PD325901_60min_R1 2 RNSRTEEPTVASESVENGHR 20 2 Q14686;A0A0D9SFT8;F6M2K2 Q14686 NCOA6 Nuclear receptor coactivator 6 1 RNS(0.499)RT(0.499)EEPT(0.002)VASESVENGHR;RNS(0.487)RT(0.487)EEPT(0.027)VASESVENGHR 103.84 2.9498000000000005e-10 9685300.0 564.28 391.82 482.14 625.19 530.9 549.31 478.52 503.80999999999995 246.34 580.0699999999999 822.25 True False 621.565290199019 424.8400464924095 514.8609197433469 663.8065663904912 493.6114155055713 544.8366014831498 496.73034045619136 493.7611143187007 235.9871864704257 543.4442812046345 721.118462672203 0.8619461605458331 0.589140437367401 0.713975506653178 0.9205236043058241 0.6845080816214673 0.7555438248858355 0.6888332030988212 0.6847156741612209 0.32725162187075746 0.7536130460324473 1.0 9.494092469311678 -11.205887590068668 1.6569964921129394 0.9996535956338347 0.6396527346507793 0.028082825517098176 0.16701811556934473 0.3549687906558021 1.757314698797813 0.13654685429132046 0.02856732509019322 6.224613781350452e-12 11.205887590068668 -0.3600008609830554 RNS(ph)SDSAIDNPKPNK ddPTM_A549_PD325901_60min_R1 2 RNSSDSAIDNPKPNK 15 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RNS(0.991)S(0.009)DSAIDNPKPNK;RNS(0.975)S(0.025)DSAIDNPKPNK 129.46 6.0401e-10 32409000.0 4556.6 4676.1 4691.299999999999 5261.0 5958.9 4936.8 5100.7 4850.8 5155.299999999999 5689.5 5741.8 True False 5019.182677608372 5070.171357774379 5009.679829078618 5585.960021402097 5540.367421089 4896.596337590824 5294.809929710142 4754.0469886210185 4938.640669038669 5330.263999023858 5035.595000269081 0.9967407381531216 1.0068663896726109 0.9948536029626931 1.1092949335885047 1.100240869409265 0.972396774825849 1.0514765245074733 0.944088432125098 0.9807462015461469 1.0585172156893141 1.0 12.297946540197326 -7.8954425980713445 1.8914478842386981 0.9880135867068391 1.0368265128483494 0.07041291441347575 0.048817048034280386 0.4175941660070916 3.0391603438146197 0.007368236174645111 0.01075468096578496 1.2722058900204405e-08 7.8954425980713445 0.04881292614151023 RNS(ph)SDSAIDNPKPNKLPK ddPTM_A549_MK2206_60min_R1 1 RNSSDSAIDNPKPNKLPK 18 3 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RNS(0.498)S(0.498)DS(0.004)AIDNPKPNKLPK 56.055 0.0016035999999999997 7063700.0 1381.5 1446.3 1379.0 1194.6 2044.4 1625.7 1335.6 1172.5 1739.6 1883.8 1895.0 True False 1614.6634255678175 1519.91049235323 1574.5629358675958 1487.2770536276319 1743.6714682003033 1797.7304949476768 1578.2612317135743 1338.7054656306548 1345.5833775703663 1458.2482716440793 1424.419200660648 1.1335591550710171 1.0670387563213786 1.1054069863262943 1.0441287599449869 1.2241280287373166 1.2620796561250274 1.108003339874648 0.939825484667548 0.9446540575599393 1.0237493786714904 1.0 10.4761580726192 -8.183592566063382 5.335594591343927 0.9706748190897938 1.1374684220309814 0.594729506308608 0.06282842798355161 0.11820709181360084 5.982837338553708 0.010653616142969922 0.013786807647848476 6.552506100226707e-09 8.183592566063382 0.1667936029411876 RNS(ph)SDSAIDNPKPNKLPK ddPTM_A549_PD325901_60min_R1 2 RNSSDSAIDNPKPNKLPK 18 3 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RNS(0.971)S(0.029)DSAIDNPKPNKLPK;RNS(0.788)S(0.205)DS(0.007)AIDNPKPNKLPK 134.29 2.9928e-13 24226000.0 5799.0 5052.2 6510.5 4906.2 7249.700000000001 5438.6 5576.3 6069.0 7114.5 6242.8 6922.799999999999 True False 6387.710211001829 5477.966624697445 6952.341680816904 5209.244831211358 6740.506082107259 5394.309844762082 5788.509147968443 5947.949033961607 6815.50230634019 5848.628542597085 6071.339487244903 1.052108883784473 0.9022665650975279 1.1451083727771891 0.8580058555703081 1.1102172916319684 0.8884875991689855 0.9534154958933446 0.9796765683186515 1.1225697921617919 0.9633176591235418 1.0 12.567799130371121 -8.721294247852262 24.8079199247306 1.0578802050099338 0.9841786514533535 0.013785634859584395 0.09323877352937064 212.3790874034282 131240.6558152525 0.014471768928264225 0.01640932197000715 1.899790677235272e-09 8.721294247852262 -0.07370155355658037 RNS(ph)SEASSGDFLDLK ddPTM_A549_MK2206_60min_R1 9 RNSSEASSGDFLDLK 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 RNS(0.999)S(0.001)EASSGDFLDLK;RNS(0.983)S(0.017)EASSGDFLDLK;RNS(0.401)S(0.401)EAS(0.137)S(0.061)GDFLDLK;RNS(0.997)S(0.003)EASSGDFLDLK;RNS(0.921)S(0.079)EASSGDFLDLK;RNS(0.911)S(0.087)EAS(0.001)S(0.001)GDFLDLK;RNS(0.883)S(0.117)EASSGDFLDLK;RNS(0.862)S(0.135)EAS(0.002)SGDFLDLK;RNS(0.487)S(0.406)EAS(0.054)S(0.054)GDFLDLK 324.25 9.425299999999997e-164 4502867100.0 66821.4 68308.5 64256.9 53711.700000000004 82390.4 69245.2 64935.49999999999 72222.2 87354.90000000001 73646.29999999999 75596.4 True False 78099.21869362093 71785.1108808064 73369.49464376394 66871.06891120979 70270.88130190299 76572.68110275616 76733.43981127342 82459.91802121128 67569.15462711065 57009.5496804232 56823.7275255001 1.374412100272255 1.2632946483243688 1.2911770811029388 1.1768159503651159 1.2366468086833686 1.3475476607618457 1.3503767379012346 1.4511529181926113 1.1891010598836278 1.0032701507453856 1.0 15.794205852156932 -9.62495701023148 1.030040766430794 1.0345981660654862 1.3015183056187773 0.6840667191408069 0.07759292242929616 0.20250903096232065 0.44640685458479196 0.024762720283208618 0.016830216093491 2.371608453872217e-10 9.62495701023148 0.2669201395532912 RNS(ph)SEASSGDFLDLK ddPTM_A549_PD325901_60min_R1 11 RNSSEASSGDFLDLK 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 RNS(0.887)S(0.113)EASSGDFLDLK;RNS(0.97)S(0.03)EASSGDFLDLK;RNS(0.984)S(0.016)EASSGDFLDLK;RNS(0.998)S(0.002)EASSGDFLDLK;RNS(0.749)S(0.25)EASSGDFLDLK;RNS(0.724)S(0.125)EAS(0.068)S(0.083)GDFLDLK;RNS(1)SEASSGDFLDLK;RNS(0.983)S(0.017)EASSGDFLDLK;RNS(0.626)S(0.373)EAS(0.001)SGDFLDLK;RNS(0.756)S(0.173)EAS(0.032)S(0.039)GDFLDLK;RNS(0.867)S(0.133)EASSGDFLDLK 329.08 7.700699999999997e-186 5184719700.0 102276.25000000001 103481.36000000002 105724.47000000002 101696.79999999999 123163.38 90811.38 105324.98000000001 105230.46 109020.47000000002 114067.68999999999 128471.28 True False 112659.2596082043 112202.09737506454 112899.56830708493 107978.38036580951 114512.80907939462 90071.84222969715 109333.17974994054 103131.55592360113 104438.71877479677 106865.43658648623 112670.12700654301 0.999903546764103 0.9958460184264166 1.0020363987033456 0.9583585572734729 1.016354664025049 0.799429668029632 0.9703830345695031 0.9153407266294468 0.9269424074469338 0.9484806614292741 1.0 16.78174552914487 RNS(ph)SSPVSPASVPGQR ddPTM_A549_PD325901_60min_R1 1 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RNS(0.333)S(0.333)S(0.333)PVS(0.001)PASVPGQR 85.23100000000001 3.3866e-05 71914000.0 2796.0 2734.2 2861.5 3524.1 4299.6 4005.7 2978.4 3617.5 3800.3 2537.7 3114.4 True False 3079.8478616935877 2964.620629675733 3055.698597597355 3741.775653188201 3997.6109288147586 3973.0789072856023 3091.744641843018 3545.346124626149 3640.586606899239 2377.4691889134083 2731.348543808219 1.127592400711873 1.0854054625859912 1.11875088389009 1.3699370816919545 1.4636033683350558 1.4546217165481503 1.131948044072146 1.2980203982619527 1.3328897972952596 0.8704378627557325 1.0 11.415397710936196 -10.815975411907234 0.9923966558437527 0.9953427659899422 1.2704712267401284 0.4474394214890045 0.13604072981107446 0.5338203387142157 0.9072907281179874 0.10614872198704958 0.02459189462827346 1.5276525456349474e-11 10.815975411907234 0.27512846075018615 RNS(ph)SSSSSPSERPR ddPTM_A549_MK2206_60min_R1 4 RNSSSSSSPSERPR 14 2 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 RNS(0.998)S(0.002)SSSSPSERPR;RNS(0.923)S(0.056)S(0.018)S(0.003)SSPSERPR;RNS(0.987)S(0.011)S(0.001)SSSPSERPR;RNS(0.486)S(0.486)S(0.023)S(0.004)SSPSERPR 179.03 8.9185e-24 279967000.0 3856.1499999999996 4330.57 4079.25 3353.55 5094.09 4002.63 3438.04 4158.87 6543.2 6634.1 6447.460000000001 True False 4506.973846184102 4550.977515639992 4657.748989222544 4175.16990054658 4344.756109100219 4426.185649869237 4062.6873652894137 4748.402558505211 5061.175647343311 5135.45220241745 4846.377741156466 0.9299675111805514 0.9390472139619096 0.9610784049431297 0.8615031934242667 0.8964955563004572 0.913297701143089 0.8382935838426733 0.9797838328161611 1.044321329797043 1.059647529907977 1.0 12.242691141794415 -8.489105389214696 7.163592216964601 1.0205480160286278 0.9072710454442887 0.7176933160842633 0.03560846396115294 0.09297823363983986 15.832839669334627 0.00588945965633309 0.007040885573667791 3.242609201705757e-09 8.489105389214696 -0.11327697058433905 RNS(ph)SSSSSPSERPR ddPTM_A549_PD325901_60min_R1 6 RNSSSSSSPSERPR 14 2 B7WPE2;Q32P44;G3V1D0;H0Y3M3;Q32P44-2 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 RNS(0.929)S(0.06)S(0.01)SSSPSERPR;RNS(0.953)S(0.037)S(0.006)S(0.004)SSPSERPR;RNS(0.698)S(0.284)S(0.014)S(0.003)SSPSERPR;RNS(0.911)S(0.072)S(0.014)S(0.002)S(0.001)SPSERPR;RNS(0.952)S(0.036)S(0.008)S(0.002)S(0.001)S(0.001)PSERPR;RNS(0.849)S(0.119)S(0.026)S(0.004)S(0.001)SPSERPR 138.97 4.9812e-10 314259400.0 5010.750000000001 5084.93 4809.75 4329.05 5471.98 4880.98 4389.4800000000005 5396.34 5784.160000000001 6432.24 6170.5 True False 5519.437651280809 5513.454896663387 5136.16855837633 4596.445586514113 5087.64700210619 4841.230917163763 4556.524063415623 5288.705765353168 5541.071870158226 6026.107268667057 5411.567618022287 1.0199332320821937 1.0188276828144551 0.9491091899639601 0.8493741390584214 0.9401429236812386 0.8946078583663785 0.8419970672159597 0.97729643952707 1.023931005075987 1.1135603754812473 1.0 12.40183085785406 -8.515808493164437 22.512004586422552 1.0107382993069178 0.9290475557804129 0.36224723077227194 0.062391524249465855 82.26479193208858 261936.04607719727 0.009593223864640902 0.011107236385339257 3.049239288164203e-09 8.515808493164437 -0.08169074352650496 RNS(ph)TDSRPVSVTYR ddPTM_A549_MK2206_60min_R1 3 RNSTDSRPVSVTYR 14 2 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 RNS(0.872)T(0.103)DS(0.025)RPVSVTYR;RNS(0.953)T(0.045)DS(0.001)RPVSVTYR;RNS(0.94)T(0.057)DS(0.002)RPVSVTYR 97.50200000000001 8.6773e-06 87607000.0 4396.59 4704.9 4411.8 3991.4999999999995 4137.1 2074.18 1864.1399999999999 2730.08 3974.6 4058.1 4112.4 True False 5138.626905694687 4944.359313747289 5037.459579739417 4969.417679185242 3528.538070383233 2293.668350870749 2202.830108180999 3117.0772005193476 3074.3594461319717 3141.372391527146 3091.177583533957 1.6623525393905076 1.599506718761431 1.6296247768400263 1.6076131328255836 1.1414866907611525 0.7420047179070625 0.7126184273317083 1.0083785600424098 0.9945593105062704 1.016238086178085 1.0 11.593940821913714 -6.842700388192274 3.591071371812432 0.9580100882687416 1.6286755466795704 0.9087302776842721 0.10492484293482954 0.056017305087599466 1.424691048573801 0.01693318938208784 0.03395636028429442 1.4364800928983003e-07 6.842700388192274 0.6706654584108288 RNS(ph)TDSRPVSVTYR ddPTM_A549_PD325901_60min_R1 3 RNSTDSRPVSVTYR 14 2 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 RNS(0.488)T(0.488)DS(0.016)RPVS(0.006)VT(0.002)YR;RNS(0.948)T(0.048)DS(0.004)RPVSVTYR;RNS(0.945)T(0.054)DS(0.001)RPVSVTYR 86.727 1.7817e-05 93629000.0 7905.6 7061.4 6844.199999999999 7516.900000000001 8856.0 9560.5 7168.5 8560.1 7685.9 8792.199999999999 9750.400000000001 True False 8708.17069220488 7656.488959985452 7308.688569518017 7981.201840881468 8233.98511154142 9482.64245777367 7441.301190253719 8389.362090231463 7362.888351437222 8237.058991513759 8551.162612878134 1.0183610213528498 0.8953740335208579 0.8547011559002587 0.9333469847552309 0.9629082598828093 1.1089301989758351 0.8702092951719861 0.9810785351686568 0.8610394498110281 0.9632677291282788 1.0 13.061904866275398 -6.517924553840592 23.946572333284443 0.9467511548686056 0.9157275748874322 0.02712317884773363 0.07306719673701954 438.683389573133 2120407.4854165134 0.011341664467881051 0.024159567098330652 3.0344182812000925e-07 6.517924553840592 -0.031023579981173444 RNS(ph)TIPTK ddPTM_A549_PD325901_60min_R1 1 RNSTIPTK 8 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 1 RNS(0.883)T(0.117)IPTK 60.06399999999999 0.019468 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RNS(ph)TIVLR ddPTM_A549_MK2206_60min_R1 2 RNSTIVLR 8 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;H0Y6F6;Q8NEY1-5 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 RNS(0.997)T(0.003)IVLR;RNS(0.993)T(0.007)IVLR 128.03 0.00044515 16280500.0 981.2 1037.17 1468.9 1034.8600000000001 1611.3 1220.61 851.12 1108.67 1708.08 1456.03 1510.8000000000002 True False 1146.802571963186 1089.95752288875 1677.2121076837634 1288.4007464566305 1374.2799044762037 1349.7741400246566 1005.7574869242716 1265.827367659478 1321.2026072432702 1127.111811743247 1135.6266640412175 1.0098411813282 0.959785074973539 1.4769044799593478 1.1345284390133588 1.2101511420890028 1.1885720745772015 0.8856409582223121 1.1146509744275739 1.1634128090491165 0.9925020673011765 1.0 10.149272913113556 RNS(ph)TIVLR ddPTM_A549_PD325901_60min_R1 3 RNSTIVLR 8 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;H0Y6F6;Q8NEY1-5 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 RNS(0.999)T(0.001)IVLR;RNS(0.813)T(0.187)IVLR;RNS(0.999)T(0.001)IVLR 156.48 0.00016083 39567400.0 3792.3799999999997 3554.5 3339.1600000000003 4244.11 4731.11 4474.79 4125.05 4148.62 5253.7 4774.92 4777.24 True False 4177.379625797399 3854.0501895188354 3565.7754776002716 4506.259035626848 4398.813155043445 4438.348793851895 4282.031035063973 4065.8725195705683 5032.905259233884 4473.430736307053 4189.669765419464 0.9970665612541817 0.919893548968763 0.8510874787868326 1.0755642539706678 1.0499188244739956 1.0593552815271905 1.0220449999202412 0.9704517890954822 1.2012653839150487 1.0677287201081298 1.0 12.03262081818875 -6.280022575023996 23.6694381414357 1.0760098895198633 0.9224036436320424 0.4284016009667345 0.065515377919401 300.24821178157003 382426.42859712976 0.012032197529068325 0.02801678700216887 5.247801809874644e-07 6.280022575023996 -0.1536062458878209 RNS(ph)TTFPSR ddPTM_A549_MK2206_60min_R1 2 RNSTTFPSR 9 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RNS(0.989)T(0.01)T(0.002)FPSR;RNS(0.983)T(0.015)T(0.002)FPSR 72.089 0.0011745999999999998 118815000.0 1532.13 986.55 1264.1399999999999 1242.23 1940.56 1408.28 1124.19 1223.12 2272.9 2080.2 2550.1 True False 1790.7160870178925 1036.7611811042502 1443.4140607307197 1546.5764057658246 1655.1061946442876 1557.3032548593924 1328.44077124894 1396.501005647903 1758.0917790754704 1610.281375238356 1916.8397908204322 0.9342022716731286 0.5408700226639719 0.7530175801040314 0.8068365510629711 0.8634556745798149 0.8124326625089761 0.6930369338171711 0.728543414183917 0.917182430944312 0.8400709245237103 1.0 10.90451404647377 -8.904557780996125 3.3745195937285617 0.9659284318798385 0.762277012867081 0.2785057319342783 0.10331839620193874 0.14859140610181487 3.176803553076115 0.017217868175795466 0.017978490142941242 1.2457824802916427e-09 8.904557780996125 -0.2036514190127574 RNS(ph)TTFPSR ddPTM_A549_PD325901_60min_R1 2 RNSTTFPSR 9 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 RNS(0.995)T(0.004)T(0.001)FPSR;RNS(0.991)T(0.009)TFPSR 105.25 0.00024091 177659000.0 2106.12 2530.8 2416.29 2530.1000000000004 2823.0 2876.4 2641.9 2867.2 2721.4 2456.1 3100.3 True False 2319.9317519564024 2744.0793978433717 2580.273969732138 2686.378530725992 2624.7222188212995 2852.975552067381 2742.4389502031513 2810.0114467251133 2607.0290219234257 2301.0214268393506 2718.982754420955 0.8532351844395806 1.0092301591032935 0.9489850443283312 0.9880086684470689 0.9653324260897235 1.0492804882372126 1.0086268277149082 1.0334789516984428 0.958825140646627 0.8462802579744148 1.0 11.408851285531833 -5.256026204917083 24.843733967347262 0.9884592603928477 0.8532351218646049 0.3222476508551939 0.05212193951697009 272.89044710869666 1252386.8928440756 0.004228092548826176 0.050332632787273054 5.545922483781085e-06 5.256026204917083 -0.13522413852824278 RNS(ph)TTIMSR ddPTM_A549_MK2206_60min_R1 1 RNSTTIMSR 9 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RNS(0.883)T(0.058)T(0.058)IMSR 44.847 0.021694 15599000.0 530.15 479.55 634.04 383.94 978.83 489.69 646.05 645.4 1165.9 1112.0 1148.4 True False 619.6263590769297 503.9570466763406 723.9564059880273 478.0053172357215 834.8454036482601 541.5086707700856 763.4289223933476 736.8874264546054 901.8255115597207 860.7984276824587 863.2205857723948 0.7178076719781872 0.5838102739700173 0.8386690701314122 0.5537464294923072 0.9671287008305705 0.6273120447950775 0.8843961033554879 0.8536490424347923 1.044721970749554 0.9971940450333807 1.0 9.753585459880565 -8.231374702288083 1.1635616873264154 1.0229178514199624 0.7117784803393408 0.5333683067034232 0.11570825949765408 0.21039214922464314 0.5567768222154114 0.019709440327092095 0.026207893674713337 5.869826947728264e-09 8.231374702288083 -0.3111393710806216 RNS(ph)TTIMSR ddPTM_A549_PD325901_60min_R1 1 RNSTTIMSR 9 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RNS(0.967)T(0.022)T(0.01)IMSR 58.04 0.0032359999999999997 147610000.0 2750.1 2641.0 2595.4 2276.3 2476.6 2059.8 1937.9 1837.9 2268.2 3446.2 3693.1 True False 3029.288127483382 2863.5663385903076 2771.5394514080626 2416.901881147614 2302.6521598061745 2043.0256717245131 2011.647844959569 1801.241642695343 2172.8754418779727 3228.606343867827 3238.872112489767 0.9352910588231671 0.8841245467975714 0.8557112955218046 0.7462171389316471 0.7109425997175581 0.630783062982382 0.6210951760652219 0.5561323757580237 0.6708741087673427 0.9968304495313807 1.0 11.66127578881886 -5.965767077202559 2.5425186106414155 0.7750195806932514 0.9136654181787848 0.1665799245430114 0.1380358952292524 0.5735437247624923 7.331734721253748 0.024317362631310884 0.09326907612637984 1.0820141064491641e-06 5.965767077202559 0.13864583748553339 RNS(ph)VERPAEPVAGAATPSLVEQQK ddPTM_A549_MK2206_60min_R1 4 RNSVERPAEPVAGAATPSLVEQQK 24 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK 173.68 8.356799999999998e-42 204970000.0 11822.5 12331.3 11632.099999999999 9490.5 13728.0 11575.099999999999 9871.8 10785.7 14557.8 15534.5 15742.999999999998 True False 13817.848967626132 12958.91049875916 13281.706690576839 11815.67292604474 11708.629385371632 12799.96939907047 11665.378277351054 12314.606004820931 11260.481544029595 12025.24566082119 11833.578615303728 1.1676813427982178 1.0950964978590754 1.1223744838607255 0.9984868745253586 0.9894411290114298 1.0816651340378947 0.9857861815583707 1.0406493593489223 0.9515702654366129 1.0161968793843639 1.0 13.530598807396165 -4.327157444457866 0.3829590214914415 0.9798512018355476 1.4968998662680049 0.629587551977185 0.03895219961086339 4.292819721433405 0.248712898177465 0.00950200194739051 1.189499121953441 4.708066142804958e-05 4.327157444457866 0.5170486644324572 RNS(ph)VERPAEPVAGAATPSLVEQQK ddPTM_A549_PD325901_60min_R1 4 RNSVERPAEPVAGAATPSLVEQQK 24 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK 226.1 1.0659999999999998e-88 341794000.0 14796.1 16793.1 18379.1 17701.8 19883.4 19667.300000000003 18392.5 21915.399999999998 19212.0 25174.0 23249.5 True False 16298.189179686868 18208.31347238958 19626.416248506564 18795.19998229531 18486.85857800617 19507.136029472545 19092.436652262182 21478.28015470128 18404.586451529663 23584.50934377827 20389.95889072346 0.7993242785350504 0.8930039324735257 0.9625530072763278 0.9217870464097063 0.9066648283639689 0.9567030583052053 0.9363646466667672 1.053375353516429 0.9026298949480935 1.1566727265207086 1.0 14.315571246212974 -4.110956468725113 0.8006707315973101 0.9567110270873582 7.342542704031389e-14 0.32914416330915897 0.0728493865823921 8.066931593107343 0.9213467944157833 0.007196397196431039 10.564231337610742 7.745394294568199e-05 4.110956468725113 -0.9567110270872848 RNS(ph)VTPLAS(ph)PEPTK ddPTM_A549_MK2206_60min_R1 2 RNSVTPLASPEPTK 14 1 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 2 RNS(0.988)VT(0.019)PLAS(0.992)PEPT(0.001)K;RNS(0.974)VT(0.032)PLAS(0.992)PEPT(0.003)K 76.704 0.00019095 17138000.0 3515.9 4416.200000000001 4024.2 3326.0 4431.6 4610.9 3864.6000000000004 3610.1 5185.1 5740.0 6439.200000000001 True False 4109.297964497929 4640.965716884694 4594.892071441899 4140.870149309813 3779.7175105050237 5098.8223775322895 4566.747795807339 4121.842730467569 4010.683128903261 4443.330013396863 4840.16892712087 0.848998873050141 0.9588437483824207 0.9493247323859684 0.8555218240643043 0.7809061145213694 1.053438930398092 0.9435100023510599 0.8515906763856297 0.8286246181264957 0.9180113504922518 1.0 12.240841684655061 -11.05865679989738 1.391799094488432 0.9995343322734206 0.8915268678670253 0.052985783488775695 0.07602830599247067 0.5301744956104858 1.8450264635501255 0.05266915858890094 0.011917569067772847 8.736615044305604e-12 11.05865679989738 -0.1080074644063953 RNS(ph)VTPLASPEPTK ddPTM_A549_PD325901_60min_R1 3 RNSVTPLASPEPTK 14 1 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 RNS(0.934)VT(0.066)PLASPEPTK;RNS(0.999)VT(0.001)PLASPEPTK;RNS(0.999)VT(0.001)PLASPEPTK 134.14 1.349e-22 11352000.0 2754.6 3207.8 2615.9 2532.6 2928.0 2928.9 2545.2 3262.2 2742.8 3093.0 3078.6 True False 3034.2449641706567 3478.132563775079 2793.4307046845784 2689.0329500480784 2722.347381051636 2905.048009473699 2642.0589787868794 3197.1328618536086 2627.529654343931 2897.707452145319 2699.9517168533193 1.1238145279527227 1.2882202826310896 1.0346224664862544 0.9959559399758576 1.0082948387774942 1.075962948277983 0.9785578617183898 1.184144457805243 0.9731765342108438 1.0732441747226784 1.0 11.398717892501484 -5.858035899652336 6.607882140067978 1.0091475300654587 1.2046299921222647 0.4265654400390856 0.07098688778111678 0.10351601071547659 5.938473610028513 0.009073883202445471 0.028834559237756918 1.3866412015933079e-06 5.858035899652336 0.19548246205680608 RNS(ph)VTPLASPEPTKKPR ddPTM_A549_PD325901_60min_R1 2 RNSVTPLASPEPTKKPR 17 3 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 RNS(0.999)VT(0.001)PLASPEPTKKPR;RNS(0.994)VT(0.006)PLASPEPTKKPR 78.987 9.7495e-05 15844700.0 2576.3999999999996 3173.1000000000004 2834.6000000000004 3763.4 3455.4 4671.5 3611.1 4146.2 3359.1 3482.2 3483.0 True False 2837.9542313545653 3440.508272995417 3026.973001834514 3995.8566706984675 3212.704624482864 4633.456852830886 3748.5223865697403 4063.5007883690246 3217.928708584909 3262.3332977240316 3054.613080556134 0.9290715899238791 1.1263319386981168 0.9909513650361939 1.3081384009430639 1.0517550143856345 1.5168719345585016 1.2271676600976484 1.3302833063326007 1.0534652421507478 1.0680021369940835 1.0 11.576773934062997 -8.945657280886836 11.950080628000954 1.02355571302258 1.189019471330694 0.14192795688842075 0.15816946322565498 0.9244730041094124 201.25061959636278 0.02706210752342946 0.028747494977718398 1.1332943382581e-09 8.945657280886836 0.165463758308114 RNSNS(ph)PPSPSSMNQR ddPTM_A549_MK2206_60min_R1 1 RNSNSPPSPSSMNQR 15 1 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RNS(0.17)NS(0.83)PPSPSSMNQR 54.103 0.006916899999999999 3089900.0 451.02 673.46 583.3 538.42 627.75 557.6 429.32 592.93 851.83 1088.6 897.57 True False 527.1411496196861 707.7362374197651 666.0207110163655 670.3329241705925 535.4088065753963 616.6048618950762 507.3218867919074 676.9796432719695 658.8918650929904 842.6845039344653 674.6785973282202 0.7813218793470047 1.0489976119332312 0.9871673914866417 0.9935588987484752 0.7935760948926746 0.9139238510557166 0.7519460211142632 1.0034105809089864 0.9766011071082639 1.249016209009092 1.0 9.398056586059226 RNSNS(ph)PPSPSSMNQR ddPTM_A549_PD325901_60min_R1 3 RNSNSPPSPSSMNQR 15 1 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RNS(0.172)NS(0.828)PPSPSSMNQR;RNS(0.029)NS(0.967)PPS(0.002)PS(0.001)S(0.001)MNQR;RNS(0.04)NS(0.948)PPS(0.007)PS(0.002)S(0.002)MNQR 65.196 0.0010122999999999998 50930000.0 2651.2 2508.25 3195.64 2554.98 3099.61 2761.87 2706.62 2863.2299999999996 3386.04 3501.3599999999997 3357.72 True False 2920.3478722897125 2719.629030204142 3412.5153473444025 2712.795311819412 2881.9040866739965 2739.3782464150795 2809.6219052192937 2806.1206314895167 3243.736514071286 3280.283532054164 2944.7417263407824 0.9917161312203151 0.9235543497336278 1.1588504746679054 0.9212336985459184 0.9786610692867556 0.9302609535876366 0.9541148821600078 0.9529258903722194 1.1015351482461053 1.1139460899786058 1.0 11.523925390206083 -8.745945772604284 24.999710211270873 1.0479471577737907 0.9766875894443028 0.25849222514063863 0.06879970645261571 300.9688439011319 485628.2974309397 0.011626828999374379 0.013160784198791617 1.794957736995037e-09 8.745945772604284 -0.07125956832948788 RNSPAFLS(ph)TDLGDEDVGLGPPAPR ddPTM_A549_PD325901_60min_R1 2 RNSPAFLSTDLGDEDVGLGPPAPR 24 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;A0A590UJF3 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RNS(0.005)PAFLS(0.824)T(0.171)DLGDEDVGLGPPAPR;RNS(0.002)PAFLS(0.878)T(0.12)DLGDEDVGLGPPAPR 167.48 3.1637999999999995e-41 25473000.0 2535.1000000000004 2430.02 2120.48 2449.2 2944.5 2953.5 2709.1 2631.71 2787.8 2612.63 3165.0 True False 2792.461485758017 2634.8063135559305 2264.388524282104 2600.481521463222 2737.6884779735456 2929.4476752298056 2812.196282976402 2579.218479513443 2670.6384608356448 2447.668095925774 2775.7250645880463 1.0060295673312496 0.9492317330596177 0.8157827131982788 0.9368656696729319 0.9862967024004786 1.0553810651504758 1.0131393482926843 0.9292053137460978 0.962140845614334 0.8818121532108728 1.0 11.438648960791978 -6.690426106085078 4.914596246495009 0.9859375976211551 0.9190392757151379 0.1154718490496427 0.06001681111174038 0.22385588825460878 10.123137824925713 0.00748712924295928 0.01574596499176966 2.0397356850477035e-07 6.690426106085078 -0.06689832190601719 RNSRTEEPT(ph)VASESVENGHR ddPTM_A549_MK2206_60min_R1 1 RNSRTEEPTVASESVENGHR 20 2 Q14686;A0A0D9SFT8;F6M2K2 Q14686 NCOA6 Nuclear receptor coactivator 6 1 RNS(0.308)RT(0.308)EEPT(0.384)VASESVENGHR 77.023 0.00010727 3893500.0 181.32 0.0 213.2 224.78 280.67 113.24 0.0 152.66 175.25 302.82 250.29 True False 211.92238315161532 0.0 243.4349658643737 279.8511100907577 239.38381480130064 125.22298163737157 0.0 174.30002250164242 135.5561548167434 234.4127516823762 188.1360853474161 1.1264313422928671 0.0 1.2939302176658003 1.4874930004734535 1.2723971287020743 0.6655978910485575 0.0 0.9264571556263451 0.7205218210340804 1.2459744298894315 1.0 7.55563278057502 -5.7797767934599085 24.999239025171697 0.8876493380589969 0.5632147522256833 0.0833329454253019 0.4587549920139055 441.677198805088 602136.5382550925 0.06148531054961984 0.1916732761143343 1.660440074758668e-06 5.7797767934599085 -0.32443458583331364 RNSS(ph)DSAIDNPKPNKLPK ddPTM_A549_MK2206_60min_R1 1 RNSSDSAIDNPKPNKLPK 18 3 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RNS(0.451)S(0.542)DS(0.007)AIDNPKPNKLPK 63.857 0.00075812 9649700.0 1495.0 1253.3 896.38 1078.2 1788.4 1114.2 1585.0 1258.3 1789.4 2098.6 2396.0 True False 1747.319450759236 1317.0876167228796 1023.5001627650431 1342.3590484022377 1525.3287290791545 1232.103904453898 1872.9739834276843 1436.6678783821333 1384.103757084626 1624.5248024590007 1801.0070737640697 0.9701902209119991 0.7313061874710975 0.56829324974607 0.7453380211309961 0.846931003936174 0.6841194143001476 1.0399592598563232 0.7977025183912939 0.7685165579010615 0.9020091181895113 1.0 10.814588132349531 -7.73730115354502 24.984899271573767 0.8896360875287658 0.7513819479562657 0.26565934353964094 0.11814633580567317 286.4532868701021 296500.3431313497 0.020158608679876202 0.029891583392492968 1.8310442779633862e-08 7.73730115354502 -0.1382541395725001 RNSS(ph)EASSGDFLDLK ddPTM_A549_MK2206_60min_R1 2 RNSSEASSGDFLDLK 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 RNS(0.409)S(0.575)EAS(0.007)S(0.009)GDFLDLK;RNS(0.202)S(0.473)EAS(0.252)S(0.074)GDFLDLK 79.805 0.00017959 11056200.0 1666.03 2825.2 1958.8799999999999 1979.03 2679.77 1788.75 1919.32 1836.37 3514.89 2457.58 2646.53 True False 1947.2151334771982 2968.9906125951356 2236.6786394578053 2463.892438842033 2285.5793828698543 1978.0343377238478 2268.0355999195112 2096.6810711472617 2718.7730271259534 1902.4109711365618 1989.323560487822 0.9788327912829333 1.4924623985587742 1.1243413006727405 1.2385579137452316 1.14892289432765 0.9943250947265683 1.14010392525756 1.0539668421928876 1.3666821632873316 0.9563104810712906 1.0 10.958062232099236 -11.188791369864607 1.6185725036093543 1.00020233116661 1.20064005776457 0.17335460553920878 0.14848980694396482 0.5178963182288786 2.443280317469705 0.10881236395639507 0.022934569783011144 6.474535703930177e-12 11.188791369864607 0.20043772659796 RNSSEASSGDFLDLK ddPTM_A549_MK2206_60min_R1 2 RNSSEASSGDFLDLK 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 0 ; 114.59 1.1076e-06 11744700.0 2797.1000000000004 2645.1 2654.8999999999996 2288.5 3224.4 3141.2 2454.5 2805.2 3692.7 3299.8999999999996 3591.7 False True 3269.182097470676 2779.724291864431 3031.404741432107 2849.182602734669 2750.095031336852 3473.599699040193 2900.450878437383 3202.845690564702 2856.3093460301766 2554.450298119915 2699.7817641228767 1.2109060594876602 1.0296107369876715 1.1228332533081504 1.0553381168052784 1.0186360497291238 1.2866224022995132 1.0743279019738474 1.186335033863474 1.0579778647249858 0.9461691800669755 1.0 11.398627076922404 -9.171959143401484 2.0301329200746574 1.0196226434147662 1.1177820101120006 0.2998540733512367 0.08121834781843083 0.30043920921102363 2.5594085421367576 0.015104060328638131 0.01414983068257945 6.730399700761691e-10 9.171959143401484 0.09815936669723446 RNSSEASSGDFLDLK ddPTM_A549_PD325901_60min_R1 2 RNSSEASSGDFLDLK 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 0 ; 143.14 1.6635e-13 33501000.0 6574.9 5912.8 5711.8 5485.3 6835.3 5077.4 6233.5 5632.799999999999 6835.2 6533.0 7822.4 False True 7242.379007814441 6411.092406973402 6099.437095843639 5824.114522979838 6355.212108504864 5036.051337806604 6470.719253602086 5520.449385153882 6547.940314048279 6120.505265071243 6860.294390279158 1.0556950760125814 0.9345214712735561 0.8890926174372878 0.848959853855899 0.9263760047251061 0.7340867681921269 0.9432130584324356 0.8046956983327423 0.9544692897328902 0.8921636473419895 1.0 12.74405477159705 -8.963521023740135 10.74948851631998 0.9799674982788028 0.8888913335261036 0.05903418345976108 0.08258393324571957 0.5319930462306172 153.54365726287992 0.013268936340176108 0.013959280274227303 1.0876244855965631e-09 8.963521023740135 -0.0910761647526992 RNSSS(ph)PVSPASVPGQR ddPTM_A549_PD325901_60min_R1 1 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RNS(0.177)S(0.177)S(0.645)PVSPASVPGQR 118.19 5.6040000000000004e-08 69463000.0 2864.5 3231.0 3235.6 5224.7 5674.0 6036.6 5138.8 5078.1 5138.6 3719.6 3172.1 True False 3155.3019312665538 3503.2877091954856 3455.187273243405 5547.417852845374 5275.477814237357 5987.439931028351 5334.359846059261 4976.813311807617 4922.642511962856 3484.743821209091 2781.9518095986546 1.1342043813914093 1.2592912994064036 1.242001123571539 1.9940740287825787 1.8963225013586549 2.152244302136975 1.9174882281044388 1.7889646019876992 1.7694923740152901 1.2526255160803186 1.0 11.441881713652519 -6.041340420186746 24.53343161955059 1.5705041446891919 1.210221823728831 0.23330692466870095 0.3393065343458631 662.8534647944768 393369.34525198303 0.06310889727504347 0.16699373612538626 9.092003198053719e-07 6.041340420186746 -0.36028232096036095 RNST(ph)DSRPVSVTYR ddPTM_A549_MK2206_60min_R1 1 RNSTDSRPVSVTYR 14 2 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 RNS(0.399)T(0.591)DS(0.01)RPVSVTYR 64.298 0.009748 31945000.0 1197.9 1209.3 947.74 1058.2 1691.2 1001.9 761.07 620.85 1333.8 1238.6 1841.1 True False 1400.0762341568493 1270.848204662076 1082.1437830595753 1317.4590475044029 1442.426720319093 1107.9203929926052 899.3465675503522 708.8573887733836 1031.6964296409265 958.7993997549404 1383.90405822497 1.011685908308284 0.9183065813768172 0.7819500034182717 0.9519872708475245 1.0422880919716253 0.8005760127719054 0.6498619338567998 0.5122157020643338 0.745497076556164 0.6928221606523219 1.0 10.43452821353205 -7.301158272632076 24.774773499989188 0.822270533351007 0.9317166041834165 0.2394683055344805 0.14212993636987772 966.885148818827 603095.2993962296 0.026025655591697852 0.04160519530022554 4.9985233749125546e-08 7.301158272632076 0.10944607083240954 RNST(ph)DSRPVSVTYR ddPTM_A549_PD325901_60min_R1 1 RNSTDSRPVSVTYR 14 2 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 RNS(0.382)T(0.617)DS(0.001)RPVSVTYR 81.594 0.00081638 37126000.0 3969.4 3240.0 3032.9 3319.4 3445.5 2934.8 2632.6 2892.2 3421.6 3644.4 5036.2 True False 4372.370565882163 3513.046170780991 3238.7308323092843 3524.431799095629 3203.4999663297185 2910.899961829838 2732.7850336139954 2834.5128021129926 3277.8020509345138 3414.291962042805 4416.779327102156 0.989945442610752 0.7953863914423582 0.7332788424442777 0.7979642037964357 0.7253022460670526 0.6590548782838278 0.6187279986675207 0.6417601134654635 0.7421249304490556 0.7730275182851208 1.0 12.108779038333259 -10.471523568452001 0.8980332603954483 0.9932795736793593 0.7398927564661542 0.07943628056523233 0.11516012881868108 0.38091475159363053 0.5723434496184777 0.05870162508111913 0.018894022175574007 3.3765752402263496e-11 10.471523568452001 -0.2533868172132051 RNST(ph)IPTK ddPTM_A549_PD325901_60min_R1 1 RNSTIPTK 8 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;Q53FA3;P34931 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA1L Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like 1 RNS(0.082)T(0.918)IPTK 51.762 0.019224 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RNST(ph)TIMSR ddPTM_A549_MK2206_60min_R1 2 RNSTTIMSR 9 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RNS(0.36)T(0.609)T(0.031)IMSR;RNS(0.231)T(0.755)T(0.014)IMSR 67.87899999999999 0.0014594 229840000.0 4291.7 4094.7 3441.5 3078.6000000000004 4808.6 4460.4 3714.4 4192.6 5843.9 6918.6 7100.5 True False 5016.034038008973 4303.102740122218 3929.556449447665 3832.857138203604 4101.2613099139035 4932.396567426104 4389.258400027629 4786.913889299003 4520.2659807906775 5355.683454823619 5337.249886169353 0.9398162246454376 0.8062396987019541 0.7362511655357368 0.7181333495618882 0.7684222019549206 0.9241457066133698 0.822382030753648 0.8968877214656074 0.8469279267782156 1.0034537578429734 1.0 12.381880843505233 -10.870730478488984 0.29142736620497045 1.0914629586211155 0.7961593507671985 0.5224333013048033 0.06599779238790664 2.789624839614379 0.2817171138847627 0.2794051222790314 0.036391524086169684 1.3466958491213074e-11 10.870730478488984 -0.29530360785391707 RNT(ph)APVR ddPTM_A549_PD325901_60min_R1 2 RNTAPVR 7 1 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4 F8VV64 TNS2 Tensin-2 1 RNT(1)APVR;RNT(1)APVR 111.46 0.005005300000000001 50047000.0 2175.8 1804.3 2458.6400000000003 2048.45 2436.7 2035.0900000000001 2020.5 1835.12 2633.6000000000004 2552.58 2586.1 True False 2396.685614260699 1956.3546931913997 2625.4980954033763 2174.978104132506 2265.554598158646 2018.5169017719388 2097.3912331600254 1798.5170919762097 2522.918950590702 2391.409663173971 2268.0260946385943 1.0567275305721764 0.8625803282493278 1.157613707183446 0.9589740211869496 0.9989102874584245 0.8899883941121876 0.9247650360452492 0.7929878303551001 1.1123853277326268 1.0544013002438746 1.0 11.147221523879232 RNT(ph)APVRR ddPTM_A549_MK2206_60min_R1 1 RNTAPVRR 8 2 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4 F8VV64 TNS2 Tensin-2 1 RNT(1)APVRR 61.593 0.020123 11027000.0 526.31 560.66 276.1 341.63 397.15 258.27 417.99 270.41 666.28 677.16 782.58 True False 615.1382609559157 589.1951992275194 315.2551316845852 425.3293653363535 338.7297611014237 285.59995997424886 493.93337244980336 308.7414455958937 515.3686438305267 524.1890856919549 588.24378789077 1.0457199440415335 1.001617375918513 0.5359259854064525 0.7230494806607837 0.5758322791915685 0.4855129214339981 0.8396746087551051 0.5248528789448489 0.876114043938233 0.8911085785903627 1.0 9.20027036982013 -8.96027482242082 6.51143725292704 0.9463627326677363 0.7107545357693276 0.21186095752055478 0.17936061903030168 0.19350365498329716 20.20598067779948 0.032428056615514345 0.03387925497671811 1.0957845620270805e-09 8.96027482242082 -0.23560819689840873 RNT(ph)APVRR ddPTM_A549_PD325901_60min_R1 2 RNTAPVRR 8 2 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4 F8VV64 TNS2 Tensin-2 1 RNT(1)APVRR;RNT(1)APVRR 61.765 0.019972 22263000.0 1648.52 1591.0900000000001 2238.12 2564.38 2661.34 2130.76 2084.1099999999997 2419.74 2778.27 2548.55 2551.49 True False 1815.8765368237187 1725.1767382308399 2390.0122821088908 2722.775928470464 2474.416659524578 2113.4077970112266 2163.421946518752 2371.4763874506925 2661.508973594177 2387.6341180617364 2237.6729052277274 0.811502222948406 0.7709691323519284 1.0680793768049222 1.2167890678344553 1.1057990887514264 0.9444668128544667 0.9668177781768248 1.0597958181959342 1.1894093043609142 1.0670165923194872 1.0 11.127783448548184 -5.765810660077853 22.119486181595985 1.0798047382657001 0.7912354119564697 0.63935069111131 0.0800156946799648 12.170242805630737 61592.79508174614 0.013281326922873286 0.04367236709997929 1.7147047065839206e-06 5.765810660077853 -0.2885693263092304 RNT(ph)LDVGEVLSK ddPTM_A549_MK2206_60min_R1 2 RNTLDVGEVLSK 12 1 E7EUN2 E7EUN2 AGAP1 1 RNT(1)LDVGEVLSK;RNT(1)LDVGEVLSK 93.226 0.00016364 13637000.0 648.8 966.6 850.9000000000001 812.3800000000001 1256.69 1170.65 747.4100000000001 849.26 1306.1599999999999 1413.67 987.74 True False 758.3015783629388 1015.7958113175907 971.5704148874087 1011.413136469124 1071.8325657271762 1294.527405985421 883.204722368256 969.6452057496708 1010.316845508916 1094.3209651635445 742.4568977628225 1.0213408760129505 1.3681545883382529 1.308588307031631 1.3622516532834739 1.4436293459685423 1.7435724684976355 1.1895703643262472 1.305995282246571 1.3607750814265602 1.4739185109074506 1.0 9.536163464592136 -10.628874608973437 0.6782620058728077 0.9713855237889212 1.3588217117298174 0.0 0.21671477737772288 0.7388598546793429 0.5370552184255428 0.16381501875592178 0.03350629804922858 2.3503113130237772e-11 10.628874608973437 0.3874361879408962 RNT(ph)LDVGEVLSK ddPTM_A549_PD325901_60min_R1 2 RNTLDVGEVLSK 12 1 E7EUN2 E7EUN2 AGAP1 1 RNT(1)LDVGEVLSK;RNT(1)LDVGEVLSK 103.61 0.00011858 17972900.0 1536.8400000000001 1562.9299999999998 1723.04 1577.44 1770.67 1430.95 1700.4 1577.63 1837.9099999999999 1610.24 2031.74 True False 1692.8588654381895 1694.6435962033122 1839.975855881232 1674.8748861738295 1646.3042476798828 1419.2968176299603 1765.1096524945826 1546.162932023207 1760.6690342041907 1508.5691715947228 1781.8488602610166 0.9500574954433614 0.9510591128111 1.0326217317958721 0.9399646196302436 0.9239303536882032 0.7965304180861067 0.990605708407849 0.8677295625380456 0.9881135675818636 0.8466313867797619 1.0 10.799159254631185 -8.962735846926256 24.71049504314815 0.9947560327409626 0.9327515937622632 0.0 0.0731363159010819 173.20990466469826 114859.05748045372 0.009972856273694737 0.010589666859600203 1.089592620117929e-09 8.962735846926256 -0.06200443897869934 RNT(ph)LEGFR ddPTM_A549_MK2206_60min_R1 1 RNTLEGFR 8 1 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;E9PP85;A0A2R8YFA9;O94851-5;O94851-6;O94851-4;O94851-3;O94851;O94851-2 Q7RTP6;A0A2R8YFA9 MICAL3;MICAL2 Protein-methionine sulfoxide oxidase MICAL3;Protein-methionine sulfoxide oxidase MICAL2 1 RNT(1)LEGFR 40.715 0.059348000000000005 1241300.0 252.5 225.69 297.3 273.58 342.61 240.24 302.09 308.59 444.45 375.82 335.03 True False 295.1158269676973 237.17665700006927 339.46161046659614 340.607112281473 292.2125228527225 265.6620373415945 356.9758426837028 352.3335775172398 343.78278464080796 290.92200098167433 251.83280464239425 1.1718720576803545 0.9418020711672695 1.3479642215343466 1.3525128815729126 1.1603433606184386 1.0549143417547922 1.417511285674688 1.3990773680877593 1.3651231225772347 1.1552188420995717 1.0 7.976322415692131 -5.7585005434840815 24.999946007526184 1.2192257618258482 1.0568371037191315 0.1818933657866526 0.1465907173507412 127.74880502894305 1086665.8223609398 0.024671010178381 0.08788481504822979 1.7438111752271792e-06 5.7585005434840815 -0.16238865810671665 RNT(ph)LPAMDNSR ddPTM_A549_PD325901_60min_R1 2 RNTLPAMDNSR 11 1 Q9UQC2-2;Q9UQC2 Q9UQC2-2 GAB2 GRB2-associated-binding protein 2 1 RNT(1)LPAMDNSR;RNT(1)LPAMDNSR 51.727 0.0074459999999999995 25588000.0 4111.4 4269.6 4053.8 4152.1 4756.4 4346.3 4150.6 3590.6000000000004 4437.4 4868.200000000001 4535.1 True False 4528.786301347288 4629.414176162504 4328.915245479696 4408.565786896721 4422.326872689206 4310.905173811171 4308.553354295472 3518.982666228792 4250.911509474172 4560.821021187793 3977.311450367538 1.1386551840009385 1.1639556604838444 1.0884023792201807 1.1084286060849802 1.111888502541219 1.0838741767162354 1.083282867852183 0.8847641705060859 1.0687902022561877 1.1467095494285051 1.0 11.957577824000978 -8.012909146865784 24.536418600143367 1.020489600939042 1.1135602575531696 0.32006072501342575 0.06165770800594399 353.34076616503745 671595.0117958538 0.008153450366091093 0.010793589819781728 9.707130163273633e-09 8.012909146865784 0.0930706566141275 RNT(ph)S(ph)ASDEDER ddPTM_A549_PD325901_60min_R1 1 RNTSASDEDER 11 1 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 2 RNT(0.992)S(0.594)AS(0.415)DEDER 63.727 0.010542000000000001 4420600.0 278.57 108.76 252.24 299.37 318.0 264.51 258.37 321.95 185.56 445.82 205.38 True False 306.8502213276048 117.92558689325323 269.35852324234025 317.8614049814001 295.66477704044394 262.3559182580111 268.2024117354889 315.5284546851109 177.76155850228213 417.67084911588296 180.11956201108788 1.7035918692091623 0.6547072709736764 1.495442917109464 1.7647245053917744 1.641491761023954 1.4565653798439777 1.4890243388387696 1.751772273717207 0.9869086762010858 2.31885334636874 1.0 7.492811064432544 -8.783108310563085 24.64698710640858 0.9938178668057397 1.4791305515541227 0.0 0.4925807255958077 153.88646397440897 175034.95315928926 0.0497854305389245 0.05302491800435344 1.6477514004909479e-09 8.783108310563085 0.48531268474838296 RNT(ph)SASDEDER ddPTM_A549_MK2206_60min_R1 3 RNTSASDEDER 11 1 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RNT(0.911)S(0.087)AS(0.001)DEDER;RNT(0.478)S(0.478)AS(0.044)DEDER;RNT(0.505)S(0.487)AS(0.008)DEDER 64.39399999999999 0.0038464 34040900.0 600.59 671.838 773.46 726.8000000000001 354.4 226.27 141.25 219.29 201.11 965.01 1431.1100000000001 True False 701.9549089842745 706.0316845478868 883.148258430856 904.8660326272924 302.2682294708412 250.21374121412995 166.91329663038522 250.3750290474594 155.55890610667763 747.0135707714473 1075.7258903733302 0.6525406846354338 0.6563304749529257 0.820978900232995 0.8411678483570373 0.28099001072284235 0.23259990621522866 0.1551634093072335 0.23274984016659378 0.1446083128599712 0.6944274349594733 1.0 10.071094791015133 -6.747598381862436 24.975412060658776 0.4793840724532991 0.7421688001538462 0.2634197508132812 0.2570785079500745 448.97433920883066 810147.625390837 0.053085965999821745 0.11005818571749425 1.7881404111091499e-07 6.747598381862436 0.2627847277005471 RNT(ph)SASDEDER ddPTM_A549_PD325901_60min_R1 7 RNTSASDEDER 11 1 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RNT(0.962)S(0.037)ASDEDER;RNT(0.947)S(0.026)AS(0.026)DEDER;RNT(0.492)S(0.492)AS(0.015)DEDER;RNT(0.5)S(0.5)ASDEDER;RNT(0.884)S(0.105)AS(0.011)DEDER;RNT(0.944)S(0.028)AS(0.028)DEDER;RNT(0.601)S(0.39)AS(0.009)DEDER 147.35 1.0439e-11 178670500.0 2710.76 2907.82 2807.1099999999997 3198.6499999999996 3415.4300000000003 3093.6500000000005 3327.897 2999.5699999999997 3329.1179999999995 4085.54 3538.03 True False 2985.95435964396 3152.872196395178 2997.6173651237154 3396.2233458387773 3175.54197939385 3068.45634009639 3454.541941430112 2939.7412232328556 3189.2067477796977 3827.5783071573815 3102.8747394200464 0.9623186916665737 1.0161132695238857 0.9660774658547756 1.0945409115914104 1.0234193275837444 0.9889075769361899 1.1133359324958747 0.9474250397173036 1.0278232334882418 1.2335587571520172 1.0 11.599389742255408 -4.8271928472875505 1.2766731411561847 1.0180259824922369 0.8737661514318928 0.0055078073636440905 0.07994315861821281 6.348293303758187 4.136511632237135 0.006127451215806877 1.5696090418236741 1.4886998777740986e-05 4.8271928472875505 -0.144259831060344 RNT(ph)TQNTGYSSGTQNANYPVR ddPTM_A549_PD325901_60min_R1 1 RNTTQNTGYSSGTQNANYPVR 21 1 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 RNT(0.86)T(0.139)QNTGYSSGTQNANYPVR 98.0 3.7704e-07 6463600.0 1457.6 1342.3 1201.4 1238.2 1365.4 1450.7 1218.3 1300.6 1378.6 1613.9 1267.6 True False 1605.5744789715925 1455.4203318022596 1282.9342286050883 1314.6808018437703 1269.499014374284 1438.8859801780513 1264.6630731793405 1274.6585126990385 1320.6622362106386 1511.9980785701025 1111.6932359784541 1.4442603651882886 1.3091923965168997 1.1540361918959745 1.1825931464687351 1.1419508307585746 1.294319272269044 1.1376007627376183 1.146591947712222 1.1879736185030045 1.3600857049735677 1.0 10.118543025971146 -2.000000008141885 0.025365776839174313 1.0772437292149061e-11 2.8618918416260297 0.0 0.12369387527395877 736.0469528984951 1.396069950692308 53.38490564372783 115.27268939906308 0.009999999812526172 2.000000008141885 2.8618918416152574 RNT(ph)YVCSER ddPTM_A549_MK2206_60min_R1 2 RNTYVCSER 9 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;H0YKP9;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 RNT(1)YVCSER;RNT(1)YVCSER 110.8 0.00021403 83200000.0 3881.3999999999996 3497.4 3128.8999999999996 3010.6 4751.200000000001 3920.9 3658.2 3593.2 5478.8 5421.8 5116.200000000001 True False 4536.485428880871 3675.4027213967956 3572.6250689166914 3748.1971351509687 4052.304773876583 4335.807035517221 4322.847587492213 4102.5471037134885 4237.860547845782 4197.011614396361 3845.70634006333 1.1796234625668702 0.9557159066223112 0.9289906074466046 0.974644656588429 1.0537218434129973 1.1274410087811906 1.1240711602074707 1.0667863692488617 1.1019719586222994 1.091350000043749 1.0 11.909032886677018 -6.859247486259681 6.706031341746116 1.0631547440183826 1.000341549324041 0.16103479767614448 0.0701032134435928 0.3463602972933344 20.41264736638 0.010804923469549173 0.02057531757479155 1.3827781669697112e-07 6.859247486259681 -0.06281319469434155 RNT(ph)YVCSER ddPTM_A549_PD325901_60min_R1 2 RNTYVCSER 9 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;H0YKP9;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 RNT(1)YVCSER;RNT(1)YVCSER 104.24 0.00038139 131290000.0 9961.3 9960.7 9803.5 9171.1 9641.099999999999 9462.8 8684.2 8674.5 9893.3 9964.8 10702.7 True False 10972.563842878519 10800.123146079695 10468.824463234552 9737.578017920694 8963.94239598939 9385.738094181343 9014.681983176577 8501.480292486398 9477.519005877497 9335.62082739659 9386.33575000521 1.1689933255234801 1.15062186498855 1.1153260166757557 1.037420594923348 0.9549991215671584 0.9999363270354071 0.9604048079328052 0.9057294048406141 1.009714467743415 0.9945969413454454 1.0 13.196346351272046 -6.2432161082954964 2.068900719056879 0.990395783998648 1.1591807397460763 0.8511250444272167 0.03088724114975387 0.10481230835504331 0.8591791544809847 0.004954748692712227 0.016188891389572038 5.711943352203637e-07 6.2432161082954964 0.16878495574742824 RNTS(ph)AS(ph)DEDER ddPTM_A549_PD325901_60min_R1 1 RNTSASDEDER 11 1 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 2 RNT(0.192)S(0.912)AS(0.895)DEDER 48.79600000000001 0.048520999999999995 2101800.0 335.98 229.07 206.77 301.18 248.23 262.77 321.86 242.51 383.47 325.05 324.01 True False 370.08844226459655 248.37453282123488 220.80265560901793 319.7832045705915 230.79518114701074 260.6300882411158 334.10855842855017 237.67294780458528 367.35408945284615 304.52628752662014 284.1588240686171 1.3023999640962396 0.8740693998693448 0.7770395880991531 1.1253678488385497 0.8122048713548997 0.9171986444389997 1.1757810426040878 0.8364088237752326 1.2927773425897184 1.07167633637548 1.0 8.150553706298478 -8.757360718495947 24.999923914927002 1.1382559640605387 0.97143574394097 0.12227608730167738 0.16954817050491733 143.65723686216108 880538.5969206161 0.03003625959036264 0.033458459832400214 1.7483938955752033e-09 8.757360718495947 -0.16682022011956876 RNTSAS(ph)DEDER ddPTM_A549_PD325901_60min_R1 1 RNTSASDEDER 11 1 C9JTC6;Q32MZ4-2;Q32MZ4;Q32MZ4-4 C9JTC6;Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RNT(0.291)S(0.291)AS(0.418)DEDER 57.019 0.011292 34426000.0 114.0 0.0 0.0 156.32 161.14 235.89 0.0 169.13 147.08 164.57 232.65 True False 125.57319607763556 0.0 0.0 165.9755313715216 149.8220823028212 233.9689900490802 0.0 165.7565694700817 140.89873908447765 154.17902211430808 204.03552488986065 0.6154477076745364 0.0 0.0 0.8134638880220295 0.7342941009105932 1.146707124533229 0.0 0.8123907322489938 0.6905598383445013 0.7556479304157188 1.0 7.672676553346159 -7.160659308453498 0.18276785319259822 1.0774504941367762 8.241242992953347e-18 0.20385035384105865 0.3487212488338322 6.613400555917931 0.47199100854229076 0.6980315842482815 1.947844246479381 6.907814895807755e-08 7.160659308453498 -1.0774504941367762 RNTTIPTK ddPTM_A549_MK2206_60min_R1 1 RNTTIPTK 8 1 P11142;E9PKE3;P11142-2;E9PNE6;A8K7Q2;E9PS65;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 47.869 0.037031 2000300.0 900.66 1098.2 742.99 734.46 755.44 736.29 901.34 664.65 1062.7 1042.3 1140.0 False True 1052.6693889771336 1154.093689208543 848.3571542568992 914.4027329711627 644.3157767253167 814.2037190902536 1065.1018108660624 758.8661729052577 822.000146783185 806.8437060912119 856.9065376006013 1.2284529791599934 1.3468139622788815 0.9900229687036337 1.0670973937619321 0.7519090454478808 0.9501663056161077 1.2429614714440416 0.8855880304404451 0.9592646463928766 0.9415772557301653 1.0 9.74299404861285 -5.769398406430066 24.842977082644865 0.9804620037333133 1.2876334824155995 0.5167339450227771 0.11599615615396033 79.36470535454566 247729.3612026154 0.01501001658223191 0.04791102817566897 1.7005977242675238e-06 5.769398406430066 0.3071714786822862 RNVPHEDICEDS(ph)DIDGDYR ddPTM_A549_MK2206_60min_R1 2 RNVPHEDICEDSDIDGDYR 19 1 O00629 O00629 KPNA4 Importin subunit alpha-3 1 RNVPHEDICEDS(1)DIDGDYR;RNVPHEDICEDS(1)DIDGDYR 141.1 6.7513e-21 4654100.0 725.35 717.21 701.22 551.62 925.5899999999999 980.95 801.33 577.5 1027.75 1145.24 1177.33 True False 847.771346895125 753.7129255484057 800.6635401661168 686.7669247631632 789.4369371216586 1084.75347789809 946.9212884164715 659.3623935195759 794.966265979504 886.5294885962761 884.9664683450136 0.9579700217122943 0.8516852926167172 0.9047388446970734 0.7760372277691993 0.8920529368734096 1.22575658705657 1.070008098936585 0.7450704824473829 0.898301002823508 1.0017661914967078 1.0 9.789478981841727 -7.019536168429212 24.963966213624737 0.9644962280537706 0.8684879965892821 0.1710561180525383 0.11782861054232027 1275.717740953721 1630154.6819988685 0.01810454989412378 0.03166362916370988 9.560130740886271e-08 7.019536168429212 -0.09600823146448845 RNVPHEDICEDS(ph)DIDGDYR ddPTM_A549_PD325901_60min_R1 2 RNVPHEDICEDSDIDGDYR 19 1 O00629 O00629 KPNA4 Importin subunit alpha-3 1 RNVPHEDICEDS(1)DIDGDYR;RNVPHEDICEDS(1)DIDGDYR 124.14 6.966e-15 6411200.0 1153.23 1261.33 1484.5500000000002 1677.24 1295.4099999999999 1257.1399999999999 1184.05 1188.52 1389.69 1325.4499999999998 1424.73 True False 1270.305060636945 1367.6267057380198 1585.3004903243593 1780.8393055115844 1204.4248705218922 1246.9022686434387 1229.109670687022 1164.8140362240968 1331.286162077153 1241.7608607972882 1249.497242107592 1.0166529527462225 1.094541596131235 1.2687506917985274 1.425244686821197 0.9639275941820616 0.9979231859209419 0.9836833802160448 0.9322261762333659 1.0654574633807141 0.9938084046530151 1.0 10.287132001771305 -6.827475385570013 24.999999993866158 1.0139488457302723 1.198505664351889 0.48881752987158 0.10172675975242862 41.299411716960634 15634.7896365841 0.015114849221510082 0.028564390850203385 1.487731691590694e-07 6.827475385570013 0.18455681862161666 RNVPQEESLEDS(ph)DVDADFK ddPTM_A549_MK2206_60min_R1 1 RNVPQEESLEDSDVDADFK 19 1 O00505 O00505 KPNA3 Importin subunit alpha-4 1 RNVPQEESLEDS(1)DVDADFK 151.94 1.0774000000000001e-21 4023600.0 1227.0 1359.6 837.05 948.8 1268.1 1226.6 951.92 1401.0 1930.6 1253.9 1547.0 True False 1434.0876027301567 1428.7978326788702 955.756276626519 1181.256042593251 1081.564169841912 1356.3979978488164 1124.8715421479376 1599.596040382555 1493.322182534691 970.6431191286292 1162.837204972043 1.2332660123001784 1.2287169919999432 0.8219175242586921 1.0158395668305529 0.930107985208398 1.1664556242689421 0.9673508358162497 1.3755975759487438 1.2842057135337301 0.8347196967712823 1.0 10.18343342100978 RNVPQEESLEDS(ph)DVDADFK ddPTM_A549_PD325901_60min_R1 2 RNVPQEESLEDSDVDADFK 19 1 O00505 O00505 KPNA3 Importin subunit alpha-4 1 RNVPQEESLEDS(1)DVDADFK;RNVPQEESLEDS(1)DVDADFK 203.79 2.8629e-55 24997000.0 5348.799999999999 5501.299999999999 5220.0 5870.5 5550.1 5321.200000000001 5039.8 5840.0 5930.0 5537.6 5927.6 True False 5891.8062384215555 5964.913857814029 5574.260590409989 6233.107452127162 5160.2801228055605 5277.865911438238 5231.592346884382 5723.516618608627 5680.782722130485 5187.9549909472735 5198.542778152322 1.1333572675755945 1.1474203661230797 1.0722736790464973 1.1990105147009191 0.9926397344448974 1.0152587247371097 1.0063574678794518 1.1009848072545616 1.092764446607009 0.9979633163259625 1.0 12.343891557654105 -2.0000000000000004 0.17089200633083249 1.0194279383321743 1.532901487675865 0.3505420265643615 0.05500431205180067 54.83609640120947 0.5583706839971867 0.07106953322162897 7.2839299749367425 0.00999999999999999 2.0000000000000004 0.5134735493436908 RNVSSFPDDATS(ph)PLQENR ddPTM_A549_MK2206_60min_R1 2 RNVSSFPDDATSPLQENR 18 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 RNVSSFPDDAT(0.374)S(0.626)PLQENR;RNVSSFPDDAT(0.129)S(0.871)PLQENR 168.83 1.4036999999999999e-30 35837000.0 3634.5 4374.8 3539.3 2885.5 5107.299999999999 4048.7 4265.8 3795.8 5396.9 5414.8 5236.6 True False 4247.9147450063165 4597.458633718389 4041.2259600552416 3592.4476295350164 4356.022935599397 4477.130746690449 5040.840642590421 4333.8662741499675 4174.51076707836 4191.592919258074 3936.207697192376 1.0791896850453992 1.1679918813729446 1.0266800613539202 0.9126671928662308 1.1066547475902928 1.1374223849732075 1.2806338055245305 1.101025811529517 1.0605412844591409 1.064881033144633 1.0 11.942590632321922 -9.437377331501152 1.3650620731886671 1.0157610055280615 1.100018250467596 0.07623113913481327 0.08693497730212936 0.5586802207332675 2.1450378681699087 0.022106256930869744 0.01783153165179397 3.652772869559172e-10 9.437377331501152 0.08425724493953446 RNVSSFPDDATS(ph)PLQENR ddPTM_A549_PD325901_60min_R1 2 RNVSSFPDDATSPLQENR 18 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 RNVSSFPDDAT(0.191)S(0.809)PLQENR;RNVSSFPDDAT(0.154)S(0.846)PLQENR 142.93 4.671e-17 57516000.0 6122.9 6603.8 7208.7 7573.200000000001 8206.1 7794.5 6384.8 7473.9 8026.799999999999 7500.799999999999 8671.099999999999 True False 6744.4923005592545 7160.325402038118 7697.92573143458 8040.979364014895 7629.731845508136 7731.024176258235 6627.777057896618 7324.827201338874 7689.461509948903 7027.198207905461 7604.609670631726 0.8868952638826209 0.941576979248601 1.0122709862628758 1.0573822605344738 1.003303545607795 1.0166234048954161 0.8715473041953039 0.9632088323516006 1.0111579480068342 0.924070861262456 1.0 12.892658483868171 -5.520438216786215 3.2189951977391913 0.998005505549319 0.8911518738309585 0.221858475829955 0.04963930566979535 0.20840025607715273 4.152014166121264 0.006298609220668588 0.04042862575046328 3.016906031027123e-06 5.520438216786215 -0.10685363171836049 RPAAAAAAGSAS(ph)PR ddPTM_A549_MK2206_60min_R1 3 RPAAAAAAGSASPR 14 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RPAAAAAAGS(0.147)AS(0.853)PR;RPAAAAAAGS(0.168)AS(0.832)PR;RPAAAAAAGS(0.181)AS(0.819)PR 91.51799999999999 2.7105999999999998e-05 18379000.0 2130.59 2049.67 1735.41 1561.6100000000001 2177.31 1597.55 1556.8300000000002 1685.26 2174.45 3284.13 3558.55 True False 2490.1815040756683 2153.9894481515885 1981.517233164599 1944.2045201033368 1857.0305832651152 1766.6016806321347 1839.6858590660704 1924.1507658922953 1681.940546883125 2542.242752072657 2674.863824016333 0.9309563655979456 0.8052706940861584 0.7407918172781343 0.7268424293779918 0.6942523827163531 0.6604454644646417 0.6877680435723135 0.7193453171769937 0.6287948312664663 0.9504195051901578 1.0 11.385249731160137 -10.895980959539228 1.1274048446375424 1.0011632245668955 0.7222142794333911 0.5845465599851964 0.07817609997454592 0.2722712674882495 0.6103780620620751 0.05966499797885072 0.014020621222240839 1.2706298112967993e-11 10.895980959539228 -0.27894894513350443 RPAAAAAAGSAS(ph)PR ddPTM_A549_PD325901_60min_R1 4 RPAAAAAAGSASPR 14 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RPAAAAAAGS(0.001)AS(0.999)PR;RPAAAAAAGS(0.016)AS(0.984)PR;RPAAAAAAGS(0.032)AS(0.968)PR;RPAAAAAAGS(0.239)AS(0.761)PR 117.26 1.4021e-06 30095100.0 4752.199999999999 4826.610000000001 4740.51 3844.21 4322.44 3341.7299999999996 3305.9900000000002 3945.09 4171.21 4955.03 5836.6 True False 5234.639845615264 5233.365363689269 5062.229515602388 4081.6581208656416 4018.84672600848 3314.5160588270496 3431.8012585571423 3866.4020850867682 3995.908549473512 4642.16856016929 5118.735201255796 1.0226432194287043 1.0223942356708255 0.9889610062971133 0.7973958332254177 0.785124951379107 0.6475263768311142 0.6704393026064734 0.755343250445581 0.7806437317744397 0.9068975787281225 1.0 12.321571660454905 -6.171866246022049 4.96204852490968 0.8371903978657763 1.0176842631542622 0.44735856285249087 0.09986037478235155 0.24538752700352315 10.104811392284175 0.018858366846401037 0.05150913983832709 6.731839514979711e-07 6.171866246022049 0.18049386528848588 RPAEATS(ph)SPTSPERPR ddPTM_A549_PD325901_60min_R1 1 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEAT(0.211)S(0.556)S(0.154)PT(0.071)S(0.008)PERPR 46.876999999999995 0.0056048 67285000.0 1504.7 1615.7 1494.9 1848.6 2012.2 1837.3 1775.3 1708.1 1702.1 2065.8 2501.9 True False 1657.4560362984053 1751.8607092996428 1596.3529035639656 1962.7838235247887 1870.870013713149 1822.3376379548743 1842.8600129814358 1674.030605521473 1630.5666562121917 1935.3650354483657 2194.1821608508158 0.7553867066605401 0.7984117000661156 0.7275389126967307 0.8945400516626659 0.8526502708360826 0.8305316078443755 0.8398846941070967 0.7629405777651347 0.7431318535467099 0.8820439205001598 1.0 11.099467587817454 -10.85552766926056 1.0613379362553705 1.0019147618114068 0.7996547077712596 0.4156005753161488 0.058910653807544115 0.25237989315239234 0.49692359597161706 0.03850246666285119 0.00902585814015167 1.3946727990521138e-11 10.85552766926056 -0.20226005404014724 RPAEATSS(ph)PTS(ph)PERPR ddPTM_A549_MK2206_60min_R1 2 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 2 RPAEAT(0.021)S(0.179)S(0.599)PT(0.382)S(0.819)PERPR;RPAEAT(0.055)S(0.234)S(0.714)PT(0.323)S(0.674)PERPR 63.044 0.0028734000000000003 132455000.0 4510.4 4291.700000000001 4600.1 3397.1 4729.299999999999 3342.0 3317.0 3821.8 5173.9 4942.0 6048.5 True False 5271.645251307333 4510.12919866719 5252.463351185298 4229.389652501614 4033.626234865827 3695.648221759942 3919.655964056547 4363.551853771632 4002.0199110205344 3825.598767631936 4546.490519892312 1.159497689094972 0.9920023321139615 1.1552786326517421 0.9302537053572899 0.8871955670461549 0.812857346911938 0.8621278207678718 0.9597626641207616 0.8802437602169082 0.8414399526170241 1.0 12.150537629275284 -6.278840156498338 22.44748472770889 0.9236235917288488 1.0912338016025402 0.6240994692934053 0.0686266490259925 123.4990817186542 159317.52672720037 0.010205749195308974 0.02379095523096521 5.262109043949591e-07 6.278840156498338 0.16761020987369146 RPAEATSS(ph)PTSPERPR ddPTM_A549_PD325901_60min_R1 3 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEAT(0.02)S(0.191)S(0.766)PT(0.02)S(0.003)PERPR;RPAEAT(0.01)S(0.089)S(0.355)PT(0.239)S(0.306)PERPR;RPAEAT(0.002)S(0.116)S(0.551)PT(0.131)S(0.2)PERPR 82.367 4.1985e-05 625230000.0 2509.71 2302.1099999999997 2884.2799999999997 2612.58 2792.12 2727.67 2689.43 2682.0 2884.33 2600.71 2944.35 True False 2764.493911649147 2496.1168889557484 3080.0245853846213 2773.9531330003188 2596.011123491083 2705.456759876105 2791.777730362565 2628.5054060117027 2763.111640627763 2436.500726760056 2582.2136157724535 1.0705907113041713 0.966657782961558 1.192784580861739 1.0742539331590146 1.0053432867189425 1.0477277105778036 1.0811567692580002 1.0179271730102009 1.070055406628779 0.943570551978207 1.0 11.334392638393131 -11.108488945412637 0.6043953029330104 0.9828084409470595 1.0598781060149123 0.23349883854697384 0.0566116684089097 2.4929128697047678 1.02716959562844 0.11352790210796485 0.010753712609072732 7.789526418616358e-12 11.108488945412637 0.07706966506785273 RPAERS(ph)SPGQTPEEGAQALAEFAALHGPALR ddPTM_A549_PD325901_60min_R1 2 RPAERSSPGQTPEEGAQALAEFAALHGPALR 31 2 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 1 RPAERS(0.333)S(0.333)PGQT(0.333)PEEGAQALAEFAALHGPALR;RPAERS(0.333)S(0.333)PGQT(0.333)PEEGAQALAEFAALHGPALR 55.783 0.00090721 3536400.0 1750.4099999999999 2104.8900000000003 2268.6 1926.44 2853.1 2423.0 1943.52 1920.27 2130.1 1950.3 2216.1000000000004 True False 1928.110334616264 2282.2764674120986 2422.5608382000187 2045.4318235373225 2652.708098660662 2403.2678913430886 2017.4817171349523 1881.968708427327 2040.5793046222852 1827.1577251597205 1943.5337490153463 0.9920642415358641 1.174292171961701 1.2464722258758625 1.0524292796940629 1.3648891355782244 1.2365454896580304 1.0380482037716454 0.9683231430278945 1.0499325291655497 0.940121428858858 1.0 10.924466444623391 -7.829728550399874 6.90091378899981 1.0196101645487528 1.1833537011574962 0.44901089053546783 0.097251760769432 0.1591274203131147 13.082358673494948 0.014274340569181516 0.01982028787196177 1.4800331728486186e-08 7.829728550399874 0.1637435366087434 RPAGGRPS(ph)PSAMGK ddPTM_A549_MK2206_60min_R1 5 RPAGGRPSPSAMGK 14 2 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 RPAGGRPS(0.923)PS(0.077)AMGK;RPAGGRPS(0.979)PS(0.021)AMGK;RPAGGRPS(0.951)PS(0.049)AMGK;RPAGGRPS(0.993)PS(0.007)AMGK;RPAGGRPS(0.999)PS(0.001)AMGK 115.5 8.1092e-07 246819000.0 7929.4 7955.1900000000005 8047.679999999999 7518.14 11134.0 8530.9 7773.66 7765.92 11373.1 13074.6 12767.0 True False 9267.6888647828 8360.075191636235 9188.96203605723 9360.084637502128 9496.203349120617 9433.634175646883 9186.033398115113 8866.762942132544 8797.111009108728 10121.03877929593 9596.601548725324 0.9657261289559101 0.8711495573916652 0.9575225135066445 0.9753540969662733 0.9895381506572977 0.983018220330291 0.9572173390209426 0.9239482224111178 0.9166902433577865 1.0546482239475978 1.0 13.228307878325356 -5.653232385034899 0.005059253372253549 1.8777208706489432 1.3789567009046133e-06 0.15476027789876223 0.042224373608248406 33520.38441471248 28.035494237570575 5025.391213764646 5384.416229027435 2.2221205461793885e-06 5.653232385034899 -1.8777194916922424 RPAGGRPS(ph)PSAMGK ddPTM_A549_PD325901_60min_R1 10 RPAGGRPSPSAMGK 14 2 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 RPAGGRPS(0.955)PS(0.045)AMGK;RPAGGRPS(0.816)PS(0.184)AMGK;RPAGGRPS(0.8)PS(0.2)AMGK;RPAGGRPS(0.929)PS(0.071)AMGK;RPAGGRPS(1)PSAMGK;RPAGGRPS(0.984)PS(0.016)AMGK;RPAGGRPS(0.994)PS(0.006)AMGK;RPAGGRPS(0.991)PS(0.009)AMGK;RPAGGRPS(0.992)PS(0.008)AMGK;RPAGGRPS(0.845)PS(0.155)AMGK 109.87 3.0788e-06 730334000.0 28875.989999999998 28370.969999999998 27776.350000000002 27763.99 32768.170000000006 29516.68 29337.579999999998 29053.900000000005 29424.17 31361.280000000002 34036.14 True False 31807.459247419687 30761.891209827885 29661.420143761392 29478.908605703764 30466.646783249584 29276.30594430407 30454.037661039765 28474.397172156365 28187.574460207452 29381.123428650477 29849.910552868183 1.0655797172686472 1.0305522073623792 0.993685394508203 0.9875710868041857 1.0206612421598074 0.9807837076245779 1.0202388247395782 0.9539190116407351 0.9443101817770438 0.9842951916593713 1.0 14.865438987919703 -2.000000000001416 0.42606312982360595 0.9752262758359103 2.7425412781289893 0.5577485200710603 0.022033341604901002 41.42692017973976 0.46198720061351384 0.005620720534765443 63.358688509170435 0.009999999999967391 2.000000000001416 1.767315002293079 RPAGGRPSPS(ph)AMGK ddPTM_A549_MK2206_60min_R1 1 RPAGGRPSPSAMGK 14 2 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 RPAGGRPS(0.421)PS(0.579)AMGK 45.438 0.017676 76651000.0 766.11 609.68 683.0 791.95 794.07 614.35 725.69 781.37 1151.4 1210.4 989.11 True False 895.4106384088017 640.7101078461707 779.8596701940298 985.977785551986 677.2633548981681 679.3601092274745 857.5384795164899 892.1315903452665 890.6097384079785 936.9697993406907 743.4866889527459 1.2043398378389956 0.8617640602936101 1.0489221687243895 1.3261539180221318 0.910928689055808 0.9137488529679014 1.1534012541964862 1.1999294723109268 1.1978825601605134 1.2602374908157126 1.0 9.538163102928317 RPAGPELQT(ph)PPGKDGAVEDEEGEGEDGEERDPETEEPLWASR ddPTM_A549_PD325901_60min_R1 1 RPAGPELQTPPGKDGAVEDEEGEGEDGEERDPETEEPLWASR 42 3 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 RPAGPELQT(1)PPGKDGAVEDEEGEGEDGEERDPETEEPLWASR 41.068999999999996 0.009702200000000001 16187000.0 698.11 857.15 1015.5 1249.0 768.19 858.16 930.78 989.54 883.83 766.03 1041.2 True False 768.9816132785803 929.3850386681861 1084.4179366975754 1326.1478933151902 714.2349845116314 851.1714294820409 966.201342242359 969.8028484208878 846.6856987016167 717.662735068502 913.1390007106085 0.8421298539216436 1.0177914183327346 1.1875715918974845 1.4522957537496226 0.7821755329208487 0.9321378550468832 1.0581098184290203 1.0620539125655386 0.9272254257486785 0.7859293431887303 1.0 9.834690677993025 RPAPAVS(ph)PGSWK ddPTM_A549_MK2206_60min_R1 1 RPAPAVSPGSWK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 RPAPAVS(0.967)PGS(0.033)WK 46.318999999999996 0.016352000000000002 3449200.0 2073.0 1906.6 1767.3 1285.8 2133.1 2101.1 1700.6 1778.4 2760.2 2400.8 2386.5 True False 2422.871720015986 2003.637796252967 2017.929714690935 1600.8210577217546 1819.3238157004837 2323.4370074026974 2009.5770070770486 2030.4936461215834 2135.019107133666 1858.4576125719866 1793.8661859507306 1.350642394060117 1.11693827106232 1.1249053750469427 0.8923859930351137 1.0141914876087934 1.295211998308168 1.1202491149093117 1.131909203721036 1.1901774635448228 1.0360068254405628 1.0 10.808856560612949 -10.948744959008403 1.2057192983031098 0.9998812035408963 1.135099976016189 0.13254068931810592 0.11688652785992779 0.7518167654194114 1.9399128816416376 0.08392467734180697 0.01951122633122723 1.1252655962274052e-11 10.948744959008403 0.1352187724752928 RPAPAVS(ph)PGSWK ddPTM_A549_PD325901_60min_R1 2 RPAPAVSPGSWK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 RPAPAVS(0.959)PGS(0.041)WK;RPAPAVS(0.996)PGS(0.004)WK 52.823 0.010046 12031000.0 4100.5 3714.7000000000003 3815.3999999999996 3502.0 4122.1 3857.4 3676.0 4341.2 4316.7 4623.6 4689.1 True False 4516.779741371447 4027.7508057407836 4074.3359878640363 3718.3105863809415 3832.5779164730006 3825.986613316896 3815.8921915843857 4254.611360394483 4135.284110728611 4331.665106931486 4112.370426653966 1.0983397098900278 0.9794231520670589 0.9907512128422544 0.9041769589337184 0.931963203419732 0.9303604044322227 0.9279057564591013 1.0345885508801917 1.0055718920470131 1.0533256145546084 1.0 12.005754507517574 -8.265648219619022 24.94914908588497 1.0051014920566306 0.9625167744348312 0.190794277760179 0.05162908726040825 544.6910860385872 3228807.8723112196 0.008111370656956853 0.009978385302921928 5.4244009128572925e-09 8.265648219619022 -0.042584717621799384 RPAPAVS(ph)PGSWKPGPPGSPR ddPTM_A549_PD325901_60min_R1 2 RPAPAVSPGSWKPGPPGSPR 20 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 RPAPAVS(0.995)PGS(0.005)WKPGPPGSPR;RPAPAVS(0.997)PGS(0.003)WKPGPPGSPR 86.791 1.0956e-06 15530400.0 6246.0 5975.700000000001 6827.6 7257.4 8071.1 7680.099999999999 6624.799999999999 7482.3 9582.599999999999 7680.3 8065.0 True False 6880.089321937821 6479.293210720971 7290.961993694112 7705.673115248725 7504.213779783422 7617.555811929038 6876.910389229654 7333.059656749201 9179.876646389137 7195.364547271805 7073.056128247263 0.9727180439670483 0.9160528480531895 1.0308078801434377 1.0894404024980116 1.060957759095714 1.0769822370710784 0.9722686013710152 1.036759715148248 1.2978656580608747 1.0172921601082856 1.0 12.788117994519279 -6.144290036346522 0.543946929632528 1.1255852328455684 0.9023404919624357 0.07001080437122187 0.09071958227967235 2.2330192882473012 0.7610336276199751 0.023929642903564332 0.26340484897991 7.173150843253473e-07 6.144290036346522 -0.22324474088313273 RPAPPLT(ph)PGRLPSIR ddPTM_A549_MK2206_60min_R1 1 RPAPPLTPGRLPSIR 15 2 E7EQ68;E5RHT4;P05423 E7EQ68 POLR3D DNA-directed RNA polymerase III subunit RPC4 1 RPAPPLT(1)PGRLPSIR 89.98200000000001 1.1461e-05 4543300.0 128.6 379.36 215.17 206.96 282.13 192.28 323.78 214.56 193.85 384.59 453.6 True False 150.30453603186476 398.66780362243037 245.6843414870417 257.66520929078723 240.62905073535117 212.62694197486593 382.6066349237953 244.9745370624419 149.94328451484 297.7108518906449 340.9586012768706 0.4408292838748834 1.169255745798587 0.7205694197681707 0.7557081954402841 0.7057427201842366 0.6236151285774582 1.1221498254948115 0.7184876291286572 0.43976976663240325 0.8731583563979166 1.0 8.413452769615612 RPAS(ph)GDDLSAK ddPTM_A549_MK2206_60min_R1 4 RPASGDDLSAK 11 1 D6RB33;D6RAL8;D6RDV8;Q92564-2;Q92564;Q92564-3 D6RB33 DCUN1D4 DCN1-like protein;DCN1-like protein 4 1 RPAS(0.998)GDDLS(0.002)AK;RPAS(1)GDDLSAK;RPAS(0.999)GDDLS(0.001)AK;RPAS(0.99)GDDLS(0.01)AK 103.6 8.7456e-05 25080000.0 10070.3 10572.5 9580.0 9356.2 12723.099999999999 9126.3 8358.2 9754.900000000001 13350.7 14289.0 14939.800000000001 True False 11769.920444803167 11110.595091201345 10938.5880533804 11648.469420015777 10851.548844188655 10092.039008452351 9876.7767497068 11137.686948128336 10326.787766687 11061.104975858509 11229.835342496013 1.048093768593682 0.9893818344029107 0.9740648655805777 1.0372787369317489 0.9663141545027073 0.8986809423876407 0.8795121609958999 0.9917943236425766 0.9195849673421573 0.984974813833735 1.0 13.455049153921447 -6.932329110200254 7.407987072268327 0.9519967751954614 1.0074927565946967 0.3626323107543904 0.040573441520187714 0.260727147526768 24.18737488349149 0.006616159040531962 0.012546229361451833 1.168613475139243e-07 6.932329110200254 0.055495981399235284 RPAS(ph)GDDLSAKK ddPTM_A549_PD325901_60min_R1 2 RPASGDDLSAKK 12 2 D6RB33;D6RAL8;D6RDV8;Q92564-2;Q92564;Q92564-3 D6RB33 DCUN1D4 DCN1-like protein;DCN1-like protein 4 1 RPAS(0.994)GDDLS(0.006)AKK;RPAS(0.99)GDDLS(0.01)AKK 66.24600000000001 0.0017831 12941600.0 5283.7 4864.799999999999 4740.7 4914.200000000001 6281.9 6444.4 5564.3 5783.200000000001 6552.9 6441.8 6314.4 True False 5820.097334345643 5274.773769017083 5062.432410144949 5217.738973042043 5840.681015378509 6391.918943034013 5776.05248140179 5667.849539167369 6277.504401323587 6035.063648635536 5537.768830279543 1.050982356381938 0.9525088407763702 0.9141646329591192 0.9422096033536768 1.0546993192353382 1.1542408393944015 1.043028818721965 1.0234897325754313 1.1335800741625943 1.0898005737684233 1.0 12.435089115475957 -6.8045682798239016 6.83546148404669 1.066591045984458 0.960474472335035 0.48457342517795354 0.05256043268248286 0.15480977971468263 18.369597327442936 0.00902334300783871 0.01730861237329033 1.5683093085427743e-07 6.8045682798239016 -0.10611657364942306 RPAS(ph)MAVMEGDLVK ddPTM_A549_MK2206_60min_R1 1 RPASMAVMEGDLVK 14 1 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-2 Q68EM7-3;Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 RPAS(1)MAVMEGDLVK 62.475 0.0025353000000000003 1876000.0 355.1 376.93 459.71 246.69 448.48 521.91 456.5 476.89 530.62 637.1 596.37 True False 415.0321986385318 396.1141270017995 524.9037906074634 307.12906107433497 382.5091860978636 577.1381697841807 539.4401409682889 544.4906179143736 410.4354172260223 493.17866751483353 448.274870025325 0.9258431074110507 0.8836411619045726 1.1709418165194254 0.6851355755386955 0.853291611185463 1.2874649202431885 1.2033691313943464 1.2146356048993177 0.9155887261822975 1.1001702314630568 1.0 8.808239814958476 RPAS(ph)MAVMEGDLVK ddPTM_A549_PD325901_60min_R1 1 RPASMAVMEGDLVK 14 1 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-2 Q68EM7-3;Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 RPAS(1)MAVMEGDLVK 87.676 3.3166999999999996e-05 1902300.0 883.59 775.79 673.41 871.36 890.54 562.26 791.63 904.42 958.89 791.02 859.02 True False 973.291406335421 841.1685459352417 719.1116521432933 925.1819281978576 827.991542596217 557.6811409767087 821.755912846558 886.3806335962352 918.5911879297981 741.0748622036822 753.3659857764375 1.2919237458435597 1.1165470193989615 0.9545316163991121 1.2280643746403581 1.0990561801683527 0.7402526149384735 1.0907791543039154 1.1765604637468594 1.2193159835628569 0.983685056393822 1.0 9.557207087329433 -11.233790122251577 1.7172888029344318 1.0000076463560326 1.1134299779164947 0.0747666570407548 0.14331574792108945 0.8768386239034348 4.66644391854059 0.10962146389004018 0.022570298919712895 5.8372712889731244e-12 11.233790122251577 0.11342233156046211 RPAS(ph)PSS(ph)PEHLPATPAESPAQR ddPTM_A549_PD325901_60min_R1 2 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 2 RPAS(0.799)PS(0.424)S(0.768)PEHLPAT(0.009)PAESPAQR;RPAS(0.731)PS(0.484)S(0.769)PEHLPAT(0.017)PAESPAQR 98.632 7.2244e-08 86259000.0 9085.0 10132.8 9438.900000000001 10952.2 12131.099999999999 9843.5 10497.3 10667.1 10954.7 12586.6 13139.3 True False 10007.302511976484 10986.726617064685 10079.480514716639 11628.69251974911 11279.053386023053 9763.33779960202 10896.78049584297 10454.336322321931 10494.312054995422 11791.879927957403 11523.249396885216 0.8684444957584188 0.9534399750155929 0.8747081806145033 1.0091504678265832 0.9788084070342026 0.8472729751246287 0.9456343536909317 0.9072385715393597 0.9107077086982149 1.023312046960018 1.0 13.492259973738543 -10.745763497659803 0.9311078138855526 1.0013567673883546 0.9231324851933967 0.3436630336447676 0.04693056914303232 0.6192231155309632 0.9272970041090262 0.03319015138827856 0.00794316942073907 1.795711245279226e-11 10.745763497659803 -0.0782242821949578 RPAS(ph)TAGLPTAGLPTATGLPSGAPPGVATIR ddPTM_A549_MK2206_60min_R1 1 RPASTAGLPTAGLPTATGLPSGAPPGVATIR 31 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RPAS(0.795)T(0.19)AGLPT(0.014)AGLPTATGLPSGAPPGVATIR 100.19 8.0237e-12 8669400.0 554.02 868.49 779.89 561.62 880.45 632.19 851.73 658.36 1148.6 1245.5 1256.9 True False 647.5250315114597 912.692431379282 890.4901291180413 699.2169252120801 750.9369713250628 699.0879261862416 1006.478316028304 751.6845461429401 888.4439339372974 964.1406849626823 944.7770413247331 0.6853733771975692 0.9660400194521416 0.9425399752193675 0.7400867026062179 0.7948298259577999 0.7399501634861968 1.065307762577566 0.7956210971098054 0.9403741783262987 1.0204954637877295 1.0 9.883830096540493 -8.82433044269936 0.619031190601295 0.9913517475983454 0.8302003662169717 0.28480841937947754 0.10662825532768677 0.6511719292520789 0.548149530560197 0.03268860165951395 0.03109106627125557 1.498544200645739e-09 8.82433044269936 -0.16115138138137375 RPAS(ph)TAGLPTAGLPTATGLPSGAPPGVATIR ddPTM_A549_PD325901_60min_R1 1 RPASTAGLPTAGLPTATGLPSGAPPGVATIR 31 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RPAS(0.754)T(0.236)AGLPT(0.01)AGLPTATGLPSGAPPGVATIR 108.28 7.0147999999999995e-15 15964000.0 728.45 844.6 820.88 861.33 1260.2 1177.7 1073.2 1152.1 1086.3 679.11 1092.3 True False 802.4017077434534 915.7774061239584 876.5898531524434 914.5323978776399 1171.6878994539861 1168.1092016651899 1114.0412132775732 1129.120461695034 1040.6465887100078 636.2308787023626 957.9540246601965 0.8376202689143455 0.9559721892173281 0.9150646383717481 0.9546725357743979 1.2231149609393883 1.2193791889746892 1.1629380790719508 1.1786791773180902 1.0863220592231906 0.664155963985897 1.0 9.903812607754583 -6.544493017435086 22.892725085149923 1.0860170148826458 0.9126400207614357 0.21464408186497874 0.14892393655944863 65.90504150528166 69802.90384060382 0.01382385697690617 0.028779997141724686 2.854348405488264e-07 6.544493017435086 -0.1733769941212101 RPAS(ph)VSSSAAVEHEQR ddPTM_A549_MK2206_60min_R1 2 RPASVSSSAAVEHEQR 16 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RPAS(1)VSSSAAVEHEQR;RPAS(1)VSSSAAVEHEQR 180.13 1.7467e-29 167582000.0 1485.5 1656.48 1152.58 1424.67 1956.71 1288.53 831.26 1129.31 2027.65 2304.5 2133.7 True False 1736.216083011938 1740.7877566018637 1316.0331752155705 1773.7142139558675 1668.8805510380641 1424.8813893430104 982.2891819962756 1289.3931508668263 1568.3905124916967 1783.9118494552395 1603.8434028757918 1.0825346663513369 1.0853851152054634 0.8205496701584709 1.1059148360591107 1.0405508094154683 0.8884167785883015 0.6124595332904507 0.80393955454433 0.9778950424208961 1.1122730849262301 1.0 10.64731757051757 -5.704723441326319 24.77211096703565 0.9478147266575191 1.0839612620096515 0.142501285350768 0.1405062481500727 126.60551123782903 55295.62171871644 0.019281754886724504 0.0746778686684936 1.9736791746827563e-06 5.704723441326319 0.1361465353521324 RPAS(ph)VSSSAAVEHEQR ddPTM_A549_PD325901_60min_R1 2 RPASVSSSAAVEHEQR 16 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RPAS(0.977)VS(0.023)SSAAVEHEQR;RPAS(0.979)VS(0.021)SSAAVEHEQR 205.2 3.2818000000000002e-40 248382000.0 2874.8 3408.4 3564.2999999999997 3590.3 3652.7 3782.8999999999996 3770.6000000000004 4208.3 4033.2999999999997 5262.9 5269.0 True False 3166.647579684096 3695.6378297808415 3806.1948318770737 3812.0646768370907 3396.1469531309117 3752.0933166164973 3914.09224635149 4124.362155152516 3863.794427178567 4930.599595827866 4620.9464029429455 0.6852811747972992 0.7997577784990534 0.8236829644795316 0.8249532334781676 0.7349461900202965 0.8119750781413303 0.8470326000445967 0.8925362459356443 0.8361478559279175 1.0670107735263303 1.0 12.173972640849753 -14.999999999999826 0.11830364662060007 1.6576870140196012 0.7042073854926147 0.8064487322449774 0.04541122369755223 27.27146871685301 0.22536663069546203 4.278302634090969 0.16444105391078837 1.0000000000004008e-15 14.999999999999826 -0.9534796285269864 RPASPS(ph)S(ph)PEHLPATPAESPAQR ddPTM_A549_MK2206_60min_R1 2 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 2 RPAS(0.241)PS(0.868)S(0.856)PEHLPAT(0.035)PAES(0.001)PAQR;RPAS(0.502)PS(0.764)S(0.725)PEHLPAT(0.009)PAESPAQR 74.13 5.1868e-05 45924000.0 2907.4 2831.1000000000004 2691.5 3200.8 3283.4 2874.8 2951.8 2767.9 4372.8 4058.9 4739.4 True False 3398.0980408945857 2975.1908973941977 3073.1951717821844 3984.996143689373 2800.4162094936805 3179.009427862204 3488.103851281919 3160.2583013382423 3382.3677819267054 3141.991670971524 3562.4761792142867 0.9538584596638748 0.835146888771726 0.8626570444774133 1.1186028883337753 0.7860869992150571 0.8923594904046047 0.9791234174795884 0.8870959810979692 0.9494429188499712 0.881968471622033 1.0 11.798664652161758 -9.609115536927693 0.5135066292242343 1.0014249064967031 0.9089705475368188 0.0 0.08932544658494257 1.2619172162791137 0.7306946324491302 0.04847029514211469 0.023085836700332322 2.459713150735538e-10 9.609115536927693 -0.0924543589598843 RPAST(ph)AGLPTAGLPTATGLPSGAPPGVATIR ddPTM_A549_MK2206_60min_R1 1 RPASTAGLPTAGLPTATGLPSGAPPGVATIR 31 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RPAS(0.444)T(0.527)AGLPT(0.029)AGLPTATGLPSGAPPGVATIR 75.515 9.555e-06 10485000.0 517.98 516.73 469.53 401.26 660.58 431.99 574.89 465.93 1013.1 657.9 1067.8 True False 605.4023606048623 543.0293498677207 536.1164142696971 499.56871801324604 563.4095570650346 477.70289506824594 679.3400715033072 531.9770043507812 783.6344675882611 509.279933068606 802.6357902192289 0.7542678360249859 0.6765576074291426 0.6679448148247468 0.6224102190568848 0.7019492077610283 0.595167697340992 0.8463864679118718 0.6627875442801759 0.9763263451960226 0.6345093743321654 1.0 9.648601678337894 -8.766184043944433 24.301729093696984 0.9888208142624905 0.6897609921767445 0.14179764355837976 0.12414096521044626 21.802212742297908 111668.58521568368 0.010339486853773882 0.011186238405561497 1.713231125972099e-09 8.766184043944433 -0.299059822085746 RPAST(ph)AGLPTAGLPTATGLPSGAPPGVATIR ddPTM_A549_PD325901_60min_R1 1 RPASTAGLPTAGLPTATGLPSGAPPGVATIR 31 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RPAS(0.441)T(0.532)AGLPT(0.027)AGLPTATGLPSGAPPGVATIR 87.75299999999999 3.5083000000000004e-09 15286000.0 1246.5 1003.4 1369.8 1251.5 921.13 1240.1 1167.6 1269.0 1209.5 1330.7 1423.2 True False 1373.0437623752 1087.9600394326064 1462.7628652765532 1328.8023126372784 856.4330065259878 1230.0010367538441 1212.0336569352353 1243.6887994887584 1158.6689211495486 1246.6793749013175 1248.155422408123 1.1000583242478923 0.8716542987359344 1.171939679158208 1.0646128589287058 0.6861589439507723 0.9854550280130556 0.97105988178684 0.9964214208910401 0.9283050014028509 0.9988174169015284 1.0 10.285581876856073 RPASVS(ph)SSAAVEHEQR ddPTM_A549_PD325901_60min_R1 1 RPASVSSSAAVEHEQR 16 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RPAS(0.209)VS(0.378)S(0.05)S(0.363)AAVEHEQR 86.439 6.372e-06 20493000.0 4759.8 3988.7 4372.4 3975.5 4639.2 5517.2 4402.9 4190.1 4902.7 4837.1 5332.9 True False 5243.011392020438 4324.8417473438685 4669.137357377135 4221.057605984419 4313.358596371157 5472.26975242183 4570.4547688593275 4106.525168430142 4696.656568598505 4531.684680495348 4676.987108038416 1.121023272227795 0.9247067925226243 0.998321622343626 0.9025164082085273 0.9222515471461776 1.1700416584464277 0.977222015644219 0.8780278999213379 1.0042055836601051 0.9689324720837194 1.0 12.191363736682854 -5.242136003631984 23.40220181924775 0.9881772749676209 1.121023564218074 0.2218196254744882 0.07502121069764527 2140.1800916631223 2594522.3523290046 0.009784395818064312 0.4493416258321576 5.726166823015311e-06 5.242136003631984 0.13284628925045305 RPASVSSS(ph)AAVEHEQR ddPTM_A549_MK2206_60min_R1 1 RPASVSSSAAVEHEQR 16 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RPAS(0.258)VS(0.128)S(0.128)S(0.486)AAVEHEQR 83.06299999999999 3.8425e-05 17404000.0 1587.0 1068.9 942.24 1267.8 1232.4 1303.9 1084.8 1018.9 1641.0 1788.2 1964.5 True False 1854.8468015751905 1123.302444358962 1075.8638003566948 1578.4110569137056 1051.1155925504083 1441.8778325412297 1281.8941181213586 1163.3321952503823 1269.316120138522 1384.244378041163 1476.660432558228 1.2561092318033988 0.7607046410886125 0.7285790129101134 1.0689059055907664 0.711819433483033 0.9764450924192914 0.8681035191689614 0.7878129389808172 0.8595856516176206 0.9374155002196682 1.0 10.528122392019432 -10.726400667247404 1.0385528944623161 0.9983840209857852 0.8807800922486849 0.02800251413568866 0.15495874511388272 1.0788251169907068 2.111103901805305 0.0896320405053526 0.02450851456938729 1.877583814208767e-11 10.726400667247404 -0.11760392873710024 RPATADS(ph)PKPSAK ddPTM_A549_MK2206_60min_R1 6 RPATADSPKPSAK 13 2 Q03111 Q03111 MLLT1 Protein ENL 1 RPAT(0.036)ADS(0.964)PKPSAK;RPATADS(1)PKPSAK;RPAT(0.182)ADS(0.818)PKPSAK;RPATADS(0.999)PKPS(0.001)AK;RPAT(0.019)ADS(0.979)PKPS(0.002)AK;RPAT(0.116)ADS(0.882)PKPS(0.002)AK 165.16 9.6173e-20 648087900.0 31420.7 34862.9 35096.3 29590.9 42526.2 33773.1 32339.600000000002 32539.100000000002 46380.9 47577.4 47217.49999999999 True False 36723.7459976393 36637.27269851443 40073.48307910799 36840.67182838597 36270.652314116516 37346.947025230606 38215.2867094372 37151.61707181442 35875.70020507784 36829.63229606065 35492.09161329504 1.034702220364012 1.0322658100203488 1.1290820365204062 1.0379966396397378 1.021936174100538 1.0522610905027856 1.076726813562097 1.0467576122760187 1.0108082836019476 1.0376855976068928 1.0 15.115209977087538 -8.755332642682758 3.417514521089354 1.0046006691602047 1.0553857780021842 0.22975352996211051 0.029238858755499312 0.1713168797591148 4.114887881031121 0.004855160889339052 0.005302702096039761 1.7565776688375533e-09 8.755332642682758 0.05078510884197951 RPATADS(ph)PKPSAK ddPTM_A549_PD325901_60min_R1 6 RPATADSPKPSAK 13 2 Q03111 Q03111 MLLT1 Protein ENL 1 RPAT(0.027)ADS(0.973)PKPSAK;RPATADS(1)PKPSAK;RPAT(0.017)ADS(0.982)PKPSAK;RPATADS(1)PKPSAK;RPAT(0.098)ADS(0.887)PKPS(0.015)AK;RPAT(0.119)ADS(0.88)PKPS(0.001)AK 148.41 2.4445e-13 924006600.0 32474.800000000003 34116.100000000006 35665.950000000004 34006.39 39645.2 36219.1 38396.78999999999 38113.700000000004 37344.9 38692.3 38007.9 True False 35771.61778931582 36991.183477463346 38086.4558437803 36106.88747618477 36860.657920515136 35924.14365800433 39858.00085497971 37353.492353880785 35775.42372338802 36249.26157473078 33333.16925192923 1.0731538162170242 1.109740966959582 1.1425992996923318 1.0832119563337053 1.1058251809759059 1.0777296148017832 1.1957459116394356 1.1206102867557028 1.0732679948012276 1.087483200315037 1.0 15.024670872115337 -9.676063566922608 0.8716140713035931 1.0105537517992835 1.113401709486222 0.2227100849831808 0.041026717596344985 0.25646063904204297 0.4093639298003956 0.01192272359344209 0.0072820161694830444 2.1083195363106174e-10 9.676063566922608 0.10284795768693855 RPCEQIS(ph)PEEEER ddPTM_A549_MK2206_60min_R1 2 RPCEQISPEEEER 13 1 P15407 P15407 FOSL1 Fos-related antigen 1 1 RPCEQIS(1)PEEEER;RPCEQIS(1)PEEEER 89.10700000000001 7.9026e-05 10912400.0 1056.96 908.73 971.1600000000001 1002.08 1427.65 1031.35 968.58 1090.56 1267.46 1492.13 1450.95 True False 1235.3490078090185 954.9804755003457 1108.8850912234764 1247.5896449850807 1217.64457619652 1140.4867724452765 1144.5584484974054 1245.150219699929 980.3823337177154 1155.056796670708 1090.6390708171857 1.1326836172148185 0.875615500171661 1.0167296596046385 1.1439069792816943 1.1164505369170137 1.0457050393314273 1.049438333104846 1.141670285814144 0.8989063017732731 1.0590642015100888 1.0 10.09095802895146 -8.770580374724767 24.999974049230445 0.9522613105952604 1.0604815330127237 0.11907000039061266 0.08249500923553575 188.54179552370678 515647.15131779225 0.013985059208449845 0.01498911802079665 1.6959756995966157e-09 8.770580374724767 0.10822022241746332 RPCEQIS(ph)PEEEER ddPTM_A549_PD325901_60min_R1 2 RPCEQISPEEEER 13 1 P15407 P15407 FOSL1 Fos-related antigen 1 1 RPCEQIS(1)PEEEER;RPCEQIS(1)PEEEER 70.942 0.0010502 11604600.0 1424.1 1479.49 1155.43 1612.9099999999999 1632.3600000000001 1353.79 1286.26 1437.4499999999998 1223.17 1554.4099999999999 1648.25 True False 1568.6735836329897 1604.1718145706068 1233.8444279650223 1712.5357875156158 1517.7086649362866 1342.7651830876437 1335.2093281684797 1408.7789320922889 1171.7644185882546 1456.26428732273 1445.5256991176132 1.0851924559975303 1.1097497716919424 0.853561046142724 1.1847148677889245 1.049935442768493 0.9289113184963109 0.9236842547894697 0.9745789597184226 0.8106147260498587 1.0074288462748688 1.0 10.49737854249812 -7.275379721552978 4.992748763428574 0.9156692759044619 1.0559899428432018 0.2646797133864385 0.09116893999720399 0.1749891135266215 13.13259573862003 0.014501622600881926 0.02416322776849384 5.304204729598136e-08 7.275379721552978 0.1403206669387399 RPDADLK ddPTM_A549_MK2206_60min_R1 2 RPDADLK 7 1 P27824;P27824-2;P27824-3;D6RFL1;H0Y9H1;D6RGY2 P27824 CANX Calnexin 0 ; 84.568 0.014140999999999999 8733700.0 2410.8199999999997 2318.4700000000003 2049.55 2073.7200000000003 2773.52 2122.98 1965.37 1930.75 3002.9 2999.0 3524.1000000000004 False True 2817.707477109955 2436.470220013959 2340.2070088523787 2581.7814930928275 2365.538882059728 2347.632334479929 2322.452288838654 2204.439725173889 2322.7479446459256 2321.5238171040423 2648.9687097879632 1.0636997963390433 0.9197806720068756 0.8834407896949831 0.9746364626932442 0.8930037086957806 0.8862438902375125 0.876738286963214 0.8321879065722689 0.8768498986278513 0.8763877838669785 1.0 11.371215087033137 -5.261205150550223 24.999999925719603 0.920744442057642 1.063699838304297 0.435851992366034 0.04881427404863797 17.54715154734026 1871737.3534752247 0.008275893358288369 0.06654825219496104 5.480180328745184e-06 5.261205150550223 0.142955396246655 RPDADLK ddPTM_A549_PD325901_60min_R1 2 RPDADLK 7 1 P27824;P27824-2;P27824-3;D6RFL1;H0Y9H1;D6RGY2 P27824 CANX Calnexin 0 ; 99.44200000000001 0.011504 19247500.0 5689.4 6380.6 6489.0 5840.4 7277.299999999999 7039.2 6407.8 7350.9 6931.4 7790.4 7696.9 False True 6266.983699685089 6918.315554717647 6929.3825615269 6201.148243489219 6766.167553322089 6981.875089039323 6651.652335482705 7204.280532830507 6640.0973625927945 7298.512814482015 6750.230094669108 0.9284103818378494 1.0249007008192625 1.026540201496135 0.9186573133835069 1.0023610245027894 1.034316607155829 0.9853963853374045 1.0672644386626136 0.9836845958535118 1.081224300819894 1.0 12.720720964718934 RPDDVPLSLS(ph)PSK ddPTM_A549_MK2206_60min_R1 4 RPDDVPLSLSPSK 13 1 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.005)LS(0.994)PS(0.001)K;RPDDVPLS(0.003)LS(0.996)PS(0.001)K;RPDDVPLS(0.009)LS(0.873)PS(0.119)K;RPDDVPLS(0.018)LS(0.978)PS(0.003)K 126.63 3.4077e-07 25531300.0 4120.91 3767.6299999999997 3216.12 3463.94 4902.52 3577.5099999999998 3620.8599999999997 3838.1099999999997 4755.91 4861.29 4884.88 True False 4816.418861423575 3959.3862741511434 3672.2141764340045 4312.605455502176 4181.365802328975 3956.079733641058 4278.723392828999 4382.173846218911 3678.7039786276628 3763.1212126874634 3671.8294801705483 1.3117218235308312 1.0783143104911392 1.000104769642908 1.1745113651905927 1.1387690591053157 1.077413794677989 1.1652837954311162 1.1934578851998785 1.0018722270449212 1.0248627375018173 1.0 11.842283346184901 -8.778079787262456 24.785938672777128 1.0008840826754932 1.1351042445562582 0.3801031330831586 0.07533619027925083 151.52772255728252 225700.20247443262 0.012538306122559007 0.013366336662981596 1.6669409390943759e-09 8.778079787262456 0.13422016188076502 RPDDVPLSLS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 RPDDVPLSLSPSK 13 1 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.041)LS(0.848)PS(0.112)K;RPDDVPLS(0.027)LS(0.969)PS(0.004)K 122.14 3.2958e-06 52148000.0 2663.6000000000004 3085.92 2992.3999999999996 2199.66 3452.1000000000004 2580.73 2503.94 2917.1 2499.0 3365.6000000000004 3364.5 True False 2934.0067111613166 3345.9813084371813 3195.4822587629974 2335.5280024096814 3209.636405098482 2559.713390518305 2599.228806908542 2858.91615207932 2393.9757205065926 3153.095441623113 2950.6878293227414 0.994346701811132 1.1339665535561483 1.082961818938482 0.7915198548623644 1.087758716188956 0.867497186615578 0.8808891205224959 0.9688982086375144 0.8113280221364764 1.0685967557424836 1.0 11.526835582283702 -6.229067663539572 24.19860899290556 0.9142613714730563 1.0767792630558368 0.26292540703038036 0.09691708381177883 357.70109498629483 267389.039488801 0.012678520468494717 0.03354061860558252 5.901091333822709e-07 6.229067663539572 0.16251789158278052 RPDDVPLSLS(ph)PSKR ddPTM_A549_MK2206_60min_R1 4 RPDDVPLSLSPSKR 14 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.001)LS(0.977)PS(0.022)KR;RPDDVPLSLS(0.998)PS(0.002)KR;RPDDVPLSLS(0.998)PS(0.002)KR;RPDDVPLSLS(0.844)PS(0.155)KR 182.09 1.1973000000000001e-26 891600000.0 13732.0 14771.3 15322.900000000001 13196.9 20004.2 14995.300000000001 14505.3 15323.900000000001 21304.7 19784.4 21528.5 True False 16049.625884833331 15523.096076676522 17495.917628720494 16430.141092431346 17061.6086794035 16582.092692925453 17140.725250355586 17496.10975247555 16479.21946661496 15315.090299137457 16182.379293626778 0.991796422121577 0.9592591914336165 1.0811709026997678 1.015310591496403 1.0543325162402413 1.0247005333422197 1.0592215730047954 1.0811827751044105 1.0183434195677943 0.9464053475232229 1.0 13.98213612222196 -5.723378538231818 24.99578018404104 1.0252114822133387 0.9755277576972621 0.23117826846353506 0.037887153091928485 172.78981569918983 113474.25803435413 0.004494082775567872 0.017404896417897775 1.8906949393551689e-06 5.723378538231818 -0.04968372451607661 RPDDVPLSLS(ph)PSKR ddPTM_A549_PD325901_60min_R1 8 RPDDVPLSLSPSKR 14 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.025)LS(0.925)PS(0.051)KR;RPDDVPLS(0.005)LS(0.991)PS(0.004)KR;RPDDVPLSLS(0.844)PS(0.156)KR;RPDDVPLSLS(0.958)PS(0.042)KR;RPDDVPLS(0.005)LS(0.976)PS(0.018)KR;RPDDVPLS(0.001)LS(0.803)PS(0.197)KR;RPDDVPLS(0.006)LS(0.952)PS(0.042)KR;RPDDVPLSLS(0.997)PS(0.002)KR 167.95 6.1946e-23 1408154000.0 26189.5 23866.299999999996 26823.479999999996 26583.2 30918.09 27814.6 28638.1 28105.17 29929.7 28623.8 30950.899999999998 True False 28848.23876030909 25877.59685978714 28643.882655488625 28225.183889172422 28746.510020020076 27588.087119501222 29727.938566869627 27544.590336270656 28671.85879233538 26816.48838303174 27144.135513920442 1.0627797943874369 0.9533402471600623 1.0552512398414406 1.0398262223049093 1.0590320699393017 1.0163553414826236 1.095188260890612 1.01475290388765 1.0562818910785157 0.987929358416271 1.0 14.728352917215139 -4.941151075298216 21.98660548720914 1.030467256781932 1.6985119761514356 0.06292832793448322 0.03754437072829349 2626.079120064515 741109.7647410419 0.004713282952845077 20676.767033733835 1.1451145283421799e-05 4.941151075298216 0.6680447193695036 RPDHSGGS(ph)PS(ph)PPTSEPAR ddPTM_A549_MK2206_60min_R1 1 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 2 RPDHS(0.037)GGS(0.869)PS(0.81)PPT(0.19)S(0.093)EPAR 55.733999999999995 0.0023962 23938000.0 688.76 964.62 950.61 905.35 990.31 852.03 1008.8 880.56 1514.3 1451.6 1324.8 True False 805.0058494347371 1013.7150377748542 1085.4207922154415 1127.1607906427057 844.6367108557239 942.1912490682593 1192.0859018812926 1005.3820766019008 1171.3134678401973 1123.6825518200155 995.8155973800664 0.8083884722760531 1.0179746535823302 1.0899817145575157 1.1318971038495491 0.8481858619988626 0.9461503229584979 1.1970950294588698 1.0096066774280332 1.1762353099528222 1.128404249518043 1.0 9.959734802172708 -7.730242250814935 24.999934992853895 1.0864079538754354 0.9825351540565579 0.26481451998908356 0.10455944987869832 281.58151583865595 225645.9157307941 0.017147250516123244 0.025432161404890217 1.8610487482922572e-08 7.730242250814935 -0.10387279981887754 RPDHSGGS(ph)PS(ph)PPTSEPAR ddPTM_A549_PD325901_60min_R1 2 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 2 RPDHS(0.138)GGS(0.863)PS(0.985)PPT(0.011)S(0.002)EPAR;RPDHS(0.099)GGS(0.899)PS(0.688)PPT(0.147)S(0.166)EPAR 78.976 8.4119e-05 57130000.0 2824.3 2642.8 2414.1 2806.6000000000004 2467.3999999999996 2657.7 2194.44 2411.6 2815.5 2849.6 2826.3 True False 3111.0208568602307 2865.518030907406 2577.9353431625973 2979.957307748929 2294.0983360678983 2636.056572357625 2277.9506150436455 2363.498746136399 2697.174326164989 2669.6757696842215 2478.683017391846 1.255110409451932 1.1560647371210058 1.0400423632527196 1.2022341246701809 0.9255311469724863 1.0634907948541854 0.9190165095981422 0.9535300518673631 1.0881481444945094 1.077054125498203 1.0 11.275358071021481 -4.985944758787215 0.7414785900411003 1.0251200420865587 1.48499841411875 0.48596980332061157 0.07546749123021844 2.4890881660890445 0.732045408083769 0.011891782463439086 1.0444131276602255 1.0328927788814285e-05 4.985944758787215 0.4598783720321913 RPDHSGGS(ph)PSPPTSEPAR ddPTM_A549_MK2206_60min_R1 4 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RPDHS(0.116)GGS(0.691)PS(0.193)PPTSEPAR;RPDHS(0.051)GGS(0.948)PS(0.001)PPTSEPAR;RPDHS(0.004)GGS(0.993)PS(0.003)PPTSEPAR;RPDHS(0.129)GGS(0.735)PS(0.133)PPT(0.001)S(0.001)EPAR 132.36 5.5577e-13 32761800.0 3462.0699999999997 3414.8199999999997 2842.82 2843.33 2312.1000000000004 1559.75 1519.02 1997.84 2703.8900000000003 5169.589999999999 5071.219999999999 True False 4046.3827765150695 3588.619752124494 3245.974623163971 3539.945977641933 1971.9931528203501 1724.8017097217448 1795.0062714866392 2281.0399381283974 2091.4632322250736 4001.7760285638137 3811.896115448175 1.061514441623057 0.9414264301645509 0.85153806002458 0.9286575159527222 0.5173260480076062 0.45247867661759594 0.47089590511455887 0.5984003417312985 0.548667426625076 1.0498124574660173 1.0 11.89629308707627 -2.6502316112415594 10.399213482593584 0.7515230909511549 1.0064450689106992 0.0 0.235850350429998 0.0 0.0 0.03361483912441522 0.0 0.0022375275366095133 2.6502316112415594 0.2549219779595443 RPDHSGGS(ph)PSPPTSEPAR ddPTM_A549_PD325901_60min_R1 3 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RPDHS(0.16)GGS(0.769)PS(0.071)PPTSEPAR;RPDHS(0.139)GGS(0.86)PS(0.001)PPTSEPAR;RPDHS(0.007)GGS(0.983)PS(0.01)PPTSEPAR 151.3 1.1398e-17 51857900.0 4380.8 3784.73 4319.9 3922.71 4816.5 5461.6 4530.4 4429.34 4800.200000000001 5042.1 5160.4 True False 4825.535591025489 4103.682479611089 4613.074391668987 4165.00688757921 4478.205656022954 5417.122540387709 4702.806851130003 4340.993338949991 4598.464287145156 4723.740945509832 4525.703514470821 1.0662509321691012 0.9067501807154775 1.0193054796715693 0.9203004293722972 0.989504867409897 1.1969680565831586 1.0391327748476893 0.9591864171105722 1.0160772291957891 1.043758374892609 1.0 12.143926359277229 -7.01172404330518 24.976463823740374 1.0212008765855187 0.9733551175377088 0.12614669260790867 0.07008961995890739 1079.7637893717415 2300295.3143395633 0.01003185426176835 0.018029307399226535 9.733655171747046e-08 7.01172404330518 -0.047845759047809966 RPDIQYPDATDEDITSHMES(ph)EELNGAYK ddPTM_A549_PD325901_60min_R1 1 RPDIQYPDATDEDITSHMESEELNGAYK 28 1 P10451-4;P10451;P10451-3;P10451-5;P10451-2;D6R9C5 P10451-4 SPP1 Osteopontin 1 RPDIQYPDATDEDITSHMES(1)EELNGAYK 174.06 9.4114e-58 9425300.0 2209.7 2498.9 2181.5 2647.2 2426.0 2477.8 2660.6 2256.6 3182.5 2957.2 3283.4 True False 2434.027117304837 2709.4910728903137 2329.5497084251697 2810.711531772596 2255.6061292456507 2457.6216183119723 2761.8505889361845 2211.590342731546 3048.7505924418692 2770.4818873210893 2879.562615187487 0.8452766765574772 0.9409384114795155 0.8089942882778722 0.9760897425700159 0.7833155345707907 0.8534704560164452 0.9591215604653075 0.7680299539475548 1.058754748503139 0.9621189942906326 1.0 11.491633977989153 -8.77864575715718 24.99950120809672 1.0277453122340392 0.8709213213118511 0.4391352158796308 0.06930752273413035 122.47166139283965 177940.9100938726 0.010680368339849935 0.011383393554130535 1.6647700068064826e-09 8.77864575715718 -0.15682399092218813 RPDPDS(ph)DEDEDYER ddPTM_A549_MK2206_60min_R1 10 RPDPDSDEDEDYER 14 1 Q96I25;Q5W012;Q5W011;Q5W010;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER 262.73 1.6891999999999994e-83 1206959400.0 12954.719999999998 12920.94 13175.099999999999 10214.779999999999 16679.11 15233.310000000001 13491.34 13972.710000000001 19577.86 18062.42 18797.01 True False 15141.16002350481 13578.560656203084 15043.527292493938 12717.401558558899 14225.635013683408 16845.288753147208 15942.541843266414 15953.384432129727 15143.505969418136 13982.106777104505 14129.193645915671 1.071622373006521 0.9610287038657893 1.064712372800027 0.9000797835505014 1.0068256809400877 1.1922328460702127 1.128340529742469 1.1291079188189466 1.0717884083778322 0.9895898610708274 1.0 13.786391512862243 RPDPDS(ph)DEDEDYER ddPTM_A549_PD325901_60min_R1 11 RPDPDSDEDEDYER 14 1 Q96I25;Q5W012;Q5W011;Q5W010;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER 241.29 1.2475999999999998e-57 1340086600.0 17089.22 17492.6 18154.75 15932.19 20748.17 17233.809999999998 18065.77 17655.78 18588.63 18267.36 19886.449999999997 True False 18824.105033981148 18966.76279228503 19386.840508380417 16916.285191671213 19290.890116500726 17093.463565211492 18753.272763318655 17303.621617208533 17807.41452480209 17113.955772072844 17440.542720593035 1.0793302327544236 1.087509895542981 1.1115961710004172 0.9699402973106565 1.1060945995518179 0.9800992915792851 1.0752688757314648 0.9921492636107687 1.0210355726932665 0.9812742668761923 1.0 14.090157314625614 -4.90686814292142 0.26831822777772 1.0024237746172113 1.1914980048721697 0.34972522022988173 0.04254636737263601 8.25943321297818 0.3785328888016019 0.01788255486252877 0.5313291855043115 1.2391727573195414e-05 4.90686814292142 0.1890742302549584 RPDPDS(ph)DEDEDYERER ddPTM_A549_MK2206_60min_R1 10 RPDPDSDEDEDYERER 16 2 Q96I25;Q5W012;Q5W011;Q5W010;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER 255.98 4.1434999999999996e-78 2504977500.0 11332.87 12918.549999999997 10487.730000000003 10231.900000000001 14122.939999999999 10986.099999999999 10049.949999999999 10281.630000000001 16433.5 17548.27 19319.780000000002 True False 13245.581393930326 13576.049015411612 11975.047816814107 12738.71595932744 12045.47423454549 12148.641810017027 11875.895826340096 11739.082538671308 12711.33848890701 13584.103619197176 14522.14542719767 0.9120953553545509 0.9348514710495758 0.8246059700233235 0.8771924247136272 0.8294555577157512 0.8365597129515416 0.8177783293712533 0.8083573186566408 0.8753072025501613 0.9354061138760055 1.0 13.825966984985946 -10.24326696037032 0.8187241765909689 0.9946506102746475 0.8557398175843104 0.4880755590450564 0.04204194116986368 0.2913358725844043 0.3768391818501149 0.022093179849963243 0.008258498773681115 5.711274572888911e-11 10.24326696037032 -0.13891079269033713 RPDPDS(ph)DEDEDYERER ddPTM_A549_PD325901_60min_R1 13 RPDPDSDEDEDYERER 16 2 Q96I25;Q5W012;Q5W011;Q5W010;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER 242.34 5.903099999999998e-66 4746416800.0 16052.12 18475.98 17627.06 16517.37 20017.829999999998 20570.159999999996 19307.610000000004 19242.079999999998 18274.32 20319.209999999995 21377.22 True False 17681.719405453812 20033.01567605744 18823.338291722655 17537.610431231 18611.846678564503 20402.643436974802 20042.371664079594 18858.281619280264 17506.313881059643 19036.251612901928 18747.95746136269 0.9431277749532839 1.0685439049743473 1.004020748954403 0.9354411256465633 0.9927399673762491 1.0882595332863445 1.0690429453653572 1.0058845961297351 0.9337717944548398 1.0153773632212137 1.0 14.194445806044486 -8.561574209692752 13.864693601907298 0.9687791257014972 1.0166943367011418 0.048996432910063614 0.050154798566746574 2.405586437367155 860.4147099799809 0.008781023167790331 0.009957911121475 2.744263379789006e-09 8.561574209692752 0.047915210999644686 RPDQQLQGEGK ddPTM_A549_MK2206_60min_R1 1 RPDQQLQGEGK 11 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 86.772 0.00031391 3086600.0 2062.4 2181.3 1778.4 1774.6 2068.0 1336.7 1517.8 1864.1 2207.3 3089.3 3185.6 False True 2410.482699161103 2292.318852914402 2030.603861600386 2209.377079664821 1763.7999394630342 1478.1487067703508 1793.564613278574 2128.3418835668253 1707.3500743337952 2391.4249843879693 2394.5276019126964 1.0066631502746772 0.95731569395289 0.848018565323024 0.9226776412600208 0.7365962029646889 0.6173028473714974 0.7490264935120872 0.8888358112333942 0.7130216719865753 0.9987042882603446 1.0 11.225525350393886 -3.6579558061389568 10.973019571841434 0.8490213966178186 1.0826682730470325 0.0 0.1291994003987105 0.0 0.0 0.0187217768489542 0.0 0.00021980835386615593 3.6579558061389568 0.2336468764292139 RPDQQLQGEGK ddPTM_A549_PD325901_60min_R1 1 RPDQQLQGEGK 11 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 65.03 0.006452600000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RPDS(ph)PTRPTLR ddPTM_A549_MK2206_60min_R1 2 RPDSPTRPTLR 11 2 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RPDS(0.998)PT(0.002)RPTLR;RPDS(0.996)PT(0.003)RPT(0.001)LR 78.40100000000001 0.00034662 431860000.0 6798.200000000001 7988.5 7342.2 6586.3 9703.1 6914.3 6891.9 6695.2 9858.400000000001 10139.2 9884.2 True False 7945.569959967524 8395.080528357723 8383.434363833974 8199.943795670246 8275.786843618846 7645.966636659122 8144.069019801423 7644.265103190067 7625.488140629862 7848.747678019777 7429.6803499577745 1.0694363129650228 1.129938319406357 1.1283708004855983 1.103673833789747 1.1138819510136637 1.0291111160256816 1.096153351987439 1.028882097630689 1.0263548068623436 1.0564044896042377 1.0 12.859084427128398 -7.996560204516693 0.5902205131427845 1.0060216099303283 1.1159609147945813 0.5514411721436315 0.02932063425304261 0.25484658950382477 0.18527653203527208 0.006054135157101554 0.010236102338399482 1.0079518713198926e-08 7.996560204516693 0.10993930486425296 RPDS(ph)PTRPTLR ddPTM_A549_PD325901_60min_R1 3 RPDSPTRPTLR 11 2 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RPDS(0.996)PT(0.004)RPTLR;RPDS(0.997)PT(0.002)RPT(0.001)LR;RPDS(0.998)PT(0.002)RPTLR 85.323 0.00014436 650543000.0 11837.0 13000.099999999999 13219.0 13587.1 14058.6 14481.7 13389.800000000001 13160.1 13387.199999999999 13763.099999999999 15713.099999999999 True False 13038.683526061164 14095.664050854915 14116.120832304525 14426.344308457028 13071.172435537059 14363.765836592325 13899.356166179703 12897.611481601269 12824.582539242037 12894.095517174661 13780.488313547687 0.9461699200631919 1.0228711588541735 1.0243556332054558 1.046867424449277 0.948527522256719 1.0423263319683103 1.0086258084566682 0.9359328340289323 0.9306333888498064 0.9356776932569503 1.0 13.750339390599759 -8.233862267285312 22.91990721142872 0.9639799885301809 1.0078530706534223 0.32447191859906865 0.036344854062741544 302.230627521516 251189.9380007397 0.006244173902868421 0.008059667361072203 5.836301681542074e-09 8.233862267285312 0.04387308212324148 RPDTTESLNS(ph)SLSNGTSDADLFDSHDDRDDDAEAGSVEEHK ddPTM_A549_PD325901_60min_R1 2 RPDTTESLNSSLSNGTSDADLFDSHDDRDDDAEAGSVEEHK 41 2 Q96SU4-5;Q96SU4-4;Q96SU4-3;Q96SU4-7;Q96SU4-2;Q96SU4;Q96SU4-6 Q96SU4-5 OSBPL9 Oxysterol-binding protein-related protein 9 1 RPDTTES(0.003)LNS(0.494)S(0.494)LS(0.006)NGT(0.002)SDADLFDSHDDRDDDAEAGSVEEHK;RPDT(0.007)T(0.007)ES(0.007)LNS(0.45)S(0.388)LS(0.134)NGT(0.005)S(0.001)DADLFDSHDDRDDDAEAGSVEEHK 131.01 4.6812e-30 23615300.0 2262.2 2849.3 2184.8 3488.8 3502.7 2672.8 2538.1 3188.7 3059.8999999999996 2360.1 3670.6 True False 2491.856878656378 3089.4205106192185 2333.0736662696836 3704.2952523603185 3256.6824356590027 2651.0336029640157 2634.688784401613 3125.098877013242 2931.303044088882 2211.082883222815 3219.1394698505146 0.7740754639537537 0.9597038399714568 0.724750725503056 1.1507097741659305 1.0116624228804325 0.8235224437439861 0.8184450562261468 0.970787039916093 0.910585910160954 0.6868552617651853 1.0 11.652459367878064 -14.999999999999998 0.18171255379907253 1.3913850469084283 0.8879784422702653 0.0 0.1475173372656537 100.33313621491934 1.1206238894426488 13.971344163089015 0.12418350391787705 1.000000000000004e-15 14.999999999999998 -0.503406604638163 RPDYAPMES(ph)S(ph)DEEDEEFQFIK ddPTM_A549_PD325901_60min_R1 2 RPDYAPMESSDEEDEEFQFIK 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 2 RPDYAPMES(1)S(1)DEEDEEFQFIK;RPDY(0.003)APMES(0.998)S(0.998)DEEDEEFQFIK 102.37 2.0593e-10 9867100.0 3313.0 3938.8999999999996 4004.2 3842.7 4206.9 4054.2 4128.5 4682.9 4330.2 4568.9 4698.0 True False 3649.333321098304 4270.844926570751 4275.949091210667 4080.054851595102 3911.421857017121 4021.183939365728 4285.612326701883 4589.4958858360205 4148.216752676126 4280.418874266648 4120.175783075717 0.8857227247654157 1.0365686202307027 1.0378074422879755 0.9902623253004355 0.9493337330615635 0.975973878562023 1.0401527877295242 1.113907786334775 1.0068057702090265 1.0388922948018762 1.0 12.008490174488472 -7.741595546758777 24.904700950234997 1.01587712454585 0.9836808268816898 0.20250251540479713 0.050152881195109966 481.8743422319302 604766.85524998 0.007827961954725461 0.011601556177745056 1.8130277576482415e-08 7.741595546758777 -0.03219629766416021 RPDYAPMES(ph)SDEEDEEFQFIK ddPTM_A549_PD325901_60min_R1 1 RPDYAPMESSDEEDEEFQFIK 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 RPDY(0.009)APMES(0.808)S(0.183)DEEDEEFQFIK 82.486 2.7850999999999998e-05 7266200.0 2318.2 2241.5 2704.7 2759.1 2830.0 2636.0 2947.6 2712.4 2805.3 3098.4 3242.4 True False 2553.541957431357 2430.3990715449354 2888.257206682356 2929.523340629258 2631.230562969988 2614.533289963014 3059.7725309886105 2658.299054163362 2687.4029966935345 2902.766495223749 2843.6053552670705 0.8979944958612335 0.8546893003430405 1.0157025486439526 1.0302144547600622 0.9253149555708526 0.9194430883737936 1.0760186976442228 0.9348340300595951 0.9450689040642682 1.0208049755733852 1.0 11.473505541635753 -5.755368477481729 24.995754696450632 0.9766941477980967 0.8763418697509893 0.41580592320808496 0.04894151061064912 103.91210184940955 427824.9444504899 0.006372224580707018 0.02346201403982909 1.7564327348966737e-06 5.755368477481729 -0.10035227804710745 RPDYAPMESS(ph)DEEDEEFQFIK ddPTM_A549_PD325901_60min_R1 1 RPDYAPMESSDEEDEEFQFIK 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 RPDY(0.015)APMES(0.445)S(0.539)DEEDEEFQFIK 60.521 0.00053423 8021700.0 1661.3 1920.7 1503.0 1781.0 2260.1 2136.5 1531.6 1755.5 1520.8 2027.6 2416.7 True False 1829.9539530155782 2082.564129697236 1605.0026182732206 1891.0083250555265 2101.358372921721 2119.101052354318 1589.885876123678 1720.4851753368916 1456.8860647244603 1899.57698996762 2119.4612207235164 0.8634052537139086 0.982591287509528 0.7572691600015801 0.8922118067392601 0.9914587501649993 0.9998300660726054 0.7501368086276858 0.8117559116035975 0.6873851007413695 0.8962546572657579 1.0 11.049481854649486 -7.761023332748243 24.999999996135585 0.8379628657072584 0.9129013522539355 0.15461844200118868 0.09835544622242935 25.643157972666142 1540809.0373266551 0.020275105422436338 0.02905742185528177 1.733710850529921e-08 7.761023332748243 0.07493848654667712 RPEAS(ph)PVQK ddPTM_A549_MK2206_60min_R1 2 RPEASPVQK 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RPEAS(1)PVQK;RPEAS(1)PVQK 107.97 0.00019398 91134000.0 10962.6 11116.9 10007.4 10364.9 12493.6 10883.6 10100.5 11818.0 13792.599999999999 14737.0 14383.6 True False 12812.818870162686 11682.702725880941 11426.599800146028 12904.300965298042 10655.807990171848 12035.295328051025 11935.630107010302 13493.237691107102 10668.59812225629 11407.901464708997 10811.755152835092 1.1850822266172822 1.0805556138419825 1.0568681623491731 1.1935435813041175 0.9855761474007899 1.1131675808340047 1.1039493531150215 1.2480154702327737 0.9867591312830217 1.0551387173910964 1.0 13.400313125077947 -8.87258875397669 22.544035089639703 0.9937394321519264 1.1146694828275776 0.3018023569863981 0.07013449761681852 2.892798035091703 572.6000660915795 0.011010164536217514 0.011721149113195082 1.3409458668986482e-09 8.87258875397669 0.12093005067565121 RPEAS(ph)PVQK ddPTM_A549_PD325901_60min_R1 2 RPEASPVQK 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RPEAS(1)PVQK;RPEAS(1)PVQK 105.03 0.00024471 149045000.0 17600.3 16910.1 17260.8 16661.0 21211.8 17135.2 17460.9 16889.9 17764.3 17058.8 17486.7 True False 19387.069499343943 18335.1734730011 18432.221685622357 17690.112130123613 19721.956344737402 16995.656612357445 18125.384104471115 16553.01769462977 17017.7282480173 15981.704456726984 15335.946757324422 1.2641586337070916 1.195568409511089 1.201896562194255 1.1535063605821954 1.2859953582792814 1.108223501378573 1.1818888257299447 1.0793606652764411 1.1096627105783126 1.0421074557457073 1.0 13.904629612990702 -9.11345516737494 0.1667899117910297 0.9042146495883765 1.302701506526752 0.7168520691033609 0.04531079302165663 1.3546889601052126 0.1628507039904416 0.1963293502395514 0.14250137882956962 7.70095937976757e-10 9.11345516737494 0.3984868569383755 RPEAS(ph)PVQKK ddPTM_A549_MK2206_60min_R1 2 RPEASPVQKK 10 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RPEAS(1)PVQKK;RPEAS(1)PVQKK 106.29 6.0929e-05 96453000.0 9301.2 9668.4 8269.4 8691.099999999999 12516.7 9847.7 9360.2 8463.7 14219.1 13209.0 14929.3 True False 10871.015167492853 10160.480262924675 9442.125266035893 10820.419890158308 10675.510010772234 10889.77707762579 11060.827179608714 9663.455393994174 10998.496553236835 10225.077725951085 11221.942782281269 0.9687284437644337 0.9054118756484327 0.8413984502705187 0.9642198414380673 0.9513067583652434 0.9704003387737863 0.9856428066157185 0.8611214280340258 0.9800884540779123 0.9111682285616204 1.0 13.454034841568324 -8.72595718232581 0.2806158408550341 1.0130290912132354 0.9084469502806363 0.0 0.05318091320051329 1.485144495341119 0.3895954009627008 0.05291459524173205 0.049427329528635926 1.879502110297353e-09 8.72595718232581 -0.1045821409325991 RPEAS(ph)PVQKK ddPTM_A549_PD325901_60min_R1 3 RPEASPVQKK 10 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RPEAS(1)PVQKK;RPEAS(1)PVQKK;RPEAS(1)PVQKK 116.19 1.6995999999999998e-05 143468000.0 15300.400000000001 14996.0 16559.7 16227.1 19510.5 19020.6 17824.1 18984.7 17333.2 17945.0 19507.6 True False 16853.685344440844 16259.765548466585 17683.540823565585 17229.411112582005 18140.149787571027 18865.70253985982 18502.40587922176 18606.03526529097 16604.745881826668 16811.949637487138 17108.288868865016 0.985118118686462 0.9504027944055445 1.0336241665726988 1.007079740390485 1.0603135080670674 1.1027229364938467 1.0814878110278967 1.0875450729120941 0.9705673085778476 0.982678616567132 1.0 14.062407851600478 -4.3302360028559015 16.22228182870793 1.0105632800941857 1.0254929824669297 0.0 0.05154386292716254 0.0 0.0 0.007630807473253462 0.0 4.67481035268911e-05 4.3302360028559015 0.014929702372743936 RPEGPGAQAPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.5)S(0.5)PR 85.42 0.00014129 160580000.0 403.25 401.92 608.0 442.41 514.93 279.97 437.24 586.19 697.56 483.39 611.62 True False 471.3087414840551 422.37601126087947 694.223542427482 550.8004698605394 439.18447912364604 309.596239570955 516.6808482737674 669.2842276315846 539.5637737744221 374.19186327106445 459.7378741467365 1.0251684013608708 0.918732249425393 1.510042094565182 1.198075035437994 0.9552932308193292 0.6734190437225971 1.1238596542273482 1.455795280895144 1.1736335075195636 0.8139243780285808 1.0 8.844667712994703 -10.945115333483738 1.326274289073704 1.0026660878098337 1.121055992658583 0.07875658511369932 0.23111173802295024 1.4604272021846771 4.724470869270912 0.1467584233906834 0.03773546411912506 1.134709436362714e-11 10.945115333483738 0.11838990484874934 RPEGPGAQAPS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.5)S(0.5)PR;RPEGPGAQAPS(0.5)S(0.5)PR 71.548 0.0014751 2569500.0 288.21 330.15999999999997 185.35 490.16999999999996 545.78 547.17 322.61 195.3 431.5 770.3199999999999 597.73 True False 317.4688670310118 357.9837418966206 197.9289656000942 520.4466876431602 507.4462956387846 542.7140289336352 334.8871000889658 191.40458829011385 413.36555558167055 721.681863736366 524.2129993226583 0.6056104435434013 0.6828974908275367 0.37757355474938714 0.9928153027788997 0.968015475187494 1.0352929622784675 0.63883783981259 0.3651275121704916 0.7885450305806704 1.376695855823605 1.0 9.034009319529957 -14.999999996730649 0.18785648326720747 2.2533175475634275 0.674817000579001 0.3088465361084084 0.24282297558899418 66.37606347955361 0.7554783993634657 30.258333743584604 0.23575534338691193 1.0000000075279589e-15 14.999999996730649 -1.5785005469844267 RPEGPGAQAPSS(ph)PR ddPTM_A549_MK2206_60min_R1 5 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.022)S(0.978)PR;RPEGPGAQAPS(0.156)S(0.844)PR;RPEGPGAQAPS(0.003)S(0.997)PR;RPEGPGAQAPS(0.019)S(0.981)PR;RPEGPGAQAPS(0.012)S(0.988)PR 176.94 2.4101999999999998e-23 4251938000.0 12177.59 13689.539999999999 11486.29 11782.650000000001 14421.2 10609.9 10705.5 11135.279999999999 16358.720000000001 18235.730000000003 19129.010000000002 True False 14232.869478509148 14386.27911324706 13115.21864004829 14669.39977894326 12299.860583648124 11732.63257571837 12650.550775763462 12713.74004036479 12653.496039507874 14116.265927735485 14378.748883181823 0.9898545133614995 1.0005237055133527 0.9121251609998261 1.0202139211222612 0.855419388959127 0.8159703372691558 0.8798088678327391 0.8842034966780372 0.8800137023262226 0.9817450768784652 1.0 13.811650529697042 -5.758588612705474 24.88480447954994 0.9233181016744275 0.9951891364580915 0.19827287579611141 0.06052563666769058 102.52318431054222 894885.6044487305 0.009587474445376417 0.03408247231013272 1.7434575890585729e-06 5.758588612705474 0.07187103478366397 RPEGPGAQAPSS(ph)PR ddPTM_A549_PD325901_60min_R1 4 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.005)S(0.995)PR;RPEGPGAQAPS(0.025)S(0.975)PR;RPEGPGAQAPS(0.007)S(0.993)PR;RPEGPGAQAPS(0.119)S(0.881)PR 159.4 4.9896e-19 2112887000.0 9152.22 9439.320000000002 8649.95 8945.74 9299.76 8571.4 8214.509999999998 8878.9 9950.0 11901.14 13457.18 True False 10081.346636891734 10234.804623696418 9236.987623374882 9498.298042550385 8646.576940030316 8501.597360238613 8527.117673202352 8701.803374137695 9531.836102057056 11149.699989338735 11802.032172092568 0.8542043005720984 0.8672069754137713 0.782660773050334 0.8048019107260477 0.732634584785853 0.720350295294207 0.7225126612826751 0.7373139851892825 0.8076436297637212 0.9447271306126112 1.0 13.526747675761518 -10.259267087521955 0.7806654317863924 0.9944499782365126 0.7779827544553637 0.6771851598071142 0.05048383591788394 0.2689582908922827 0.3124056294152638 0.031589926358283886 0.011158517810888613 5.5046905835863686e-11 10.259267087521955 -0.2164672237811489 RPEPSTLENITDDKYATVS(ph)SPSK ddPTM_A549_MK2206_60min_R1 3 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKYAT(0.006)VS(0.975)S(0.019)PSK;RPEPSTLENITDDKYAT(0.001)VS(0.653)S(0.346)PSK;RPEPSTLENITDDKYATVS(0.576)S(0.423)PS(0.001)K 307.85 5.0340999999999975e-176 266330000.0 18097.3 18750.699999999997 17069.1 16559.6 23164.6 19252.8 18441.7 18477.9 24751.8 27103.2 26439.7 True False 21151.68180349508 19705.030539284868 19489.755046133116 20616.702743388687 19757.11802596006 21290.11851702567 21792.318176768662 21097.19891119545 19145.556820502537 20980.568296010108 19873.99279140229 1.064289497611448 0.9914983237696193 0.9806663034800235 1.0373709480415885 0.9941192106352785 1.0712552198487266 1.0965244078279157 1.0615480810842568 0.963347276083602 1.0556795766317544 1.0 14.278594126403314 -8.76591790158748 24.998778281717893 0.9826917684397045 1.0354416801119195 0.018952923394684018 0.04174717040368853 109.29255460949572 610059.7146654046 0.006734478551409484 0.007286398962758374 1.7142813421919976e-09 8.76591790158748 0.05274991167221499 RPEPSTLENITDDKYATVS(ph)SPSK ddPTM_A549_PD325901_60min_R1 5 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKYAT(0.101)VS(0.742)S(0.157)PSK;RPEPSTLENITDDKYAT(0.007)VS(0.659)S(0.334)PSK;RPEPSTLENITDDKYAT(0.001)VS(0.988)S(0.012)PSK;RPEPSTLENITDDKYAT(0.002)VS(0.873)S(0.125)PSK;RPEPSTLENITDDKYAT(0.001)VS(0.98)S(0.02)PSK 321.0 1.1591999999999996e-196 424011000.0 47314.5 47002.299999999996 47925.3 49055.0 56899.399999999994 46896.9 45059.600000000006 47348.9 49331.0 51304.8 54811.200000000004 True False 52117.83320890602 50963.34877558617 51177.7990562406 52085.01593801171 52902.982436273734 46514.98719501766 46774.36773555922 46404.48904500654 47257.78962317356 48065.40617226805 48069.76987682415 1.0842122469580109 1.060195397360475 1.064656626969103 1.0835295461467025 1.1005457810976502 0.9676557078223896 0.9730516259057549 0.965357004285962 0.9831082974657203 0.999909221438603 1.0 15.55284227646484 -7.263201289816477 24.999957711813778 0.9865114784281038 1.0771000215970739 0.9128738732712498 0.014891955260447511 38.60383285982495 547757.7148901417 0.0024821026494902614 0.0040916299311539355 5.455049680661116e-08 7.263201289816477 0.09058854316897003 RPEPSTLENITDDKYATVSS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKYAT(0.001)VS(0.168)S(0.828)PS(0.002)K 111.43 2.8309999999999997e-11 9367000.0 1590.8 1721.1 1523.1 1311.4 2140.8 1780.5 1475.2 1491.0 2288.0 2402.9 2105.3 True False 1859.2881486741098 1808.6966385875273 1739.098482683056 1632.6930588709838 1825.8911559006124 1968.911328199753 1743.2247447019051 1702.353815995997 1769.771653185214 1860.0832211134727 1582.4959066759163 1.1749086622155027 1.142939220858241 1.0989592297499768 1.031720241413141 1.153804662746936 1.244180992755624 1.1015666690497827 1.0757397910569297 1.118342010060978 1.1754110789585785 1.0 10.627986052608914 -10.694086828403464 0.46350913009698647 0.9697248395057791 1.1324741039518826 0.0 0.07353093571499524 1.3192648797733448 0.37517340345673184 0.0993726186450156 0.014433126096245683 2.0226147573131293e-11 10.694086828403464 0.1627492644461035 RPEPSTLENITDDKYATVSS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKYATVS(0.179)S(0.82)PS(0.001)K 156.73 2.539e-33 15875000.0 2721.9 2454.6 3076.9 2295.9 3545.6 2849.5 2510.8 2503.2 2635.3 2998.2 2939.7 True False 2998.2252842431276 2661.4577564194483 3285.716936902778 2437.7125286327814 3296.5692876559683 2826.294616748713 2606.34986796248 2453.27171227759 2524.5475055026104 2808.8931403239867 2578.1355362936742 1.162943236317736 1.0323187896651693 1.2744546943510666 0.9455331165937207 1.2786640738039374 1.0962552499515956 1.0109436960437568 0.9515681692221704 0.979214424518541 1.0895056139531165 1.0 11.3321123949089 -7.736319173279825 3.741169543812957 0.9870613491594858 1.134194999688422 0.29884666136385507 0.09526465479390332 0.1637563451413622 4.90030701730085 0.012408483844615504 0.018259296928574722 1.8351891237584297e-08 7.736319173279825 0.14713365052893612 RPES(ph)PPSILTPPVVPTADK ddPTM_A549_MK2206_60min_R1 2 RPESPPSILTPPVVPTADK 19 1 P55198;Q6P2C6 P55198 MLLT6 Protein AF-17 1 RPES(0.775)PPS(0.153)ILT(0.072)PPVVPTADK;RPES(0.701)PPS(0.16)ILT(0.139)PPVVPTADK 67.413 0.00067947 17811800.0 2080.32 2077.33 1709.94 1387.9499999999998 2231.29 1611.73 1423.56 1694.94 2245.5 2444.7 2427.0 True False 2431.4271570591673 2183.057224006178 1952.4352041750813 1727.9978123074427 1903.0701967719892 1782.2821988202124 1682.202425140893 1935.2029355360517 1736.8978353266598 1892.4405720821112 1824.3089182075944 1.3327935487198483 1.196648880141998 1.070232779486367 0.9472067998249011 1.0431732135814908 0.9769629370508841 0.9221039311662617 1.0607868635742963 0.952085372160096 1.0373465552870602 1.0 10.833134332711879 -5.598183901621738 1.484636079000205 0.9811598497196301 1.3695628568838951 0.8612273265133071 0.04299740175334867 0.13763360709904476 0.42291941785584053 0.005455161229727662 0.06506857950238139 2.5224124329455416e-06 5.598183901621738 0.388403007164265 RPES(ph)PPSILTPPVVPTADK ddPTM_A549_PD325901_60min_R1 2 RPESPPSILTPPVVPTADK 19 1 P55198;Q6P2C6 P55198 MLLT6 Protein AF-17 1 RPES(0.954)PPS(0.046)ILTPPVVPTADK;RPES(0.833)PPS(0.164)ILT(0.003)PPVVPTADK 136.4 2.9013e-17 28141000.0 4092.2999999999997 4505.1 4360.3 5341.9 5420.2 5244.2 5404.299999999999 5742.5 5394.0 5427.5 5640.4 True False 4507.7472834079645 4884.760587649826 4656.216178613923 5671.85703066486 5039.503850674888 5201.492973908969 5609.963593846435 5627.9613325959 5167.30893814028 5084.806723737053 4946.66655744152 0.9112696865784763 0.9874853158035151 0.9412836148434832 1.1466018509237093 1.018767647294461 1.051514775355962 1.1340897003472135 1.1377280573176038 1.0446042558431266 1.0279259102450966 1.0 12.272240938931501 -6.199839367425668 24.999893766410985 1.0466265978168108 0.9507599623213012 0.4714635468505257 0.05416325087647361 209.47462871486215 85013.09527456238 0.008370352325510385 0.022145868027811266 6.311907599452042e-07 6.199839367425668 -0.09586663549550956 RPES(ph)PS(ph)EISPIKGSVR ddPTM_A549_PD325901_60min_R1 1 RPESPSEISPIKGSVR 16 2 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 RPES(1)PS(0.981)EIS(0.017)PIKGS(0.003)VR 108.71 5.0821e-07 63453000.0 8224.0 7571.4 8747.5 7981.3 8941.0 7269.2 7436.5 8327.5 7593.5 8577.6 9974.2 True False 9058.89442581119 8209.468449830609 9341.157952990687 8474.28677415254 8313.0150047755 7210.002045295576 7719.500076908946 8161.401479702633 7274.371602107564 8036.00887213763 8747.436631663226 1.035605607363942 0.9384999052310564 1.0678737493425627 0.9687737254909672 0.9503372650548569 0.8242417006140319 0.8824871104486264 0.9330049274276178 0.8316003771637983 0.918670144239693 1.0 13.09464459296787 -6.761061937299777 2.857038547512897 0.9101533274033728 1.0065778505196785 0.43354039944725886 0.05511131126335537 0.2718954900570724 4.551628046067901 0.010370549207408758 0.022243852036583814 1.7335567473624217e-07 6.761061937299777 0.09642452311630567 RPES(ph)PSEIS(ph)PIK ddPTM_A549_MK2206_60min_R1 2 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 RPES(0.991)PS(0.063)EIS(0.946)PIK;RPES(0.986)PS(0.023)EIS(0.991)PIK 73.464 0.00034928 21283000.0 1898.6 2186.79 1563.9 1730.3 2733.7 2008.44 1971.88 2012.54 2705.7 2753.6 2587.5 True False 2219.037263686614 2298.0882704647165 1785.6845361880585 2154.223577676119 2331.576351310492 2220.971787705429 2330.14507157185 2297.82370814526 2092.8632701150505 2131.5598475417437 1944.952338632942 1.1409211524670675 1.1815653395804984 0.9181122337646439 1.1075971039939563 1.198783283784372 1.1419157907316608 1.1980473892792922 1.181429314489188 1.076048614942447 1.095944515041414 1.0 10.925519086834795 -9.450985446350431 1.277843978511691 1.01865936076336 1.1300406938641359 0.12143062810389704 0.07894279851138036 0.3786819022769717 1.277648813235737 0.019436865682159816 0.015377770411622242 3.5400920409295833e-10 9.450985446350431 0.1113813331007758 RPES(ph)PSEIS(ph)PIK ddPTM_A549_PD325901_60min_R1 2 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 RPES(0.792)PS(0.212)EIS(0.996)PIK;RPES(0.753)PS(0.255)EIS(0.992)PIK 102.78 5.0953000000000005e-05 32606000.0 5313.9 4411.8 4993.1 4725.6 6257.799999999999 4961.3 4681.1 4852.2 4804.2 6180.0 5705.6 True False 5853.36321611358 4783.597869213447 5331.9617919494485 5017.489579383717 5818.273716238019 4920.89681771377 4859.24182209621 4755.41906452274 4602.296181055527 5789.7937453146 5003.847370778375 1.169772533490177 0.9559839688853924 1.0655724279455856 1.002726343869921 1.1627600294556857 0.9834226452331416 0.9711011271993153 0.9503525411853259 0.9197515111935989 1.157068414821367 1.0 12.288822069213907 -7.499823818484703 23.97873558137664 0.961407916476592 1.0620455803785736 0.08824124933406297 0.08434377051267593 355.1878314179082 369420.1462514504 0.00881338986841078 0.014024018713889336 3.163560770858771e-08 7.499823818484703 0.10063766390198159 RPES(ph)PSEIS(ph)PIKGSVR ddPTM_A549_MK2206_60min_R1 3 RPESPSEISPIKGSVR 16 2 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 RPES(0.995)PS(0.339)EIS(0.658)PIKGS(0.008)VR;RPES(0.978)PS(0.108)EIS(0.869)PIKGS(0.044)VR;RPES(0.983)PS(0.039)EIS(0.976)PIKGS(0.002)VR 96.738 3.8057e-06 131981000.0 18960.4 22964.1 20205.0 17898.6 31486.5 23708.4 21131.5 21068.9 33425.6 31976.5 34951.1 True False 22160.45198272604 24132.8746023984 23070.372820308025 22283.757803498684 26854.877559914352 26217.207151637784 24970.820019433508 24055.48109580018 25854.7549697149 24752.986441356243 26271.777268712587 0.8435079117817135 0.9185855359370211 0.8781428292551354 0.8482013826311138 1.022194931284538 0.9979228616124196 0.9504808054676831 0.9156396558084472 0.9841266049596757 0.942189262194869 1.0 14.681226180707238 -3.00754980089657 0.22682766997500645 1.002582604241356 0.4343504375114485 0.39404500735426595 0.04590317381222481 17.364058849118138 0.3041758363488909 0.02663574368014707 3.3609203982454643 0.000982766171953221 3.00754980089657 -0.5682321667299075 RPES(ph)PSEIS(ph)PIKGSVR ddPTM_A549_PD325901_60min_R1 3 RPESPSEISPIKGSVR 16 2 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 RPES(0.96)PS(0.058)EIS(0.981)PIKGS(0.001)VR;RPES(0.998)PS(0.469)EIS(0.531)PIKGS(0.002)VR;RPES(1)PS(0.145)EIS(0.855)PIKGSVR 118.05 4.3014000000000004e-08 172629000.0 14505.8 15310.4 15053.5 15363.2 17156.5 14937.8 14591.5 16324.7 15565.9 16602.2 18130.3 True False 15978.418137394441 16600.661139853466 16075.121034049187 16312.149971641265 15951.486626711876 14816.151509411804 15146.787517275168 15999.091052020587 14911.719354875377 15553.934258650832 15900.388037440964 1.0049074336909098 1.0440412586638486 1.0109892284513293 1.0258963449967835 1.003213669323704 0.9318106875457325 0.9526048975414136 1.0062075852706993 0.9378210971809273 0.9782109859222096 1.0 13.9567743534151 -7.032550849906285 8.0881479080849 0.9689046079930314 1.021422392479111 0.5428593657589434 0.023289981691888673 0.19375315397560697 43.81424757729707 0.004076180505444453 0.007175557863918807 9.27788852462751e-08 7.032550849906285 0.05251778448607969 RPES(ph)PSEISPIK ddPTM_A549_MK2206_60min_R1 2 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 RPES(0.977)PS(0.023)EISPIK;RPES(0.987)PS(0.013)EISPIK 120.3 6.444199999999999e-06 102344000.0 3062.1000000000004 3344.8 2976.8 2342.6000000000004 4382.9 2880.2 2596.0 3375.3 4341.0 4694.5 5109.0 True False 3578.9076188427175 3515.036033204094 3398.955001806132 2916.537105163311 3738.1812159925216 3184.9808522779745 3067.6595968317165 3853.759111422729 3357.7704311525426 3634.0091895281507 3840.2942987732195 0.9319357685649243 0.9153038178159864 0.8850766991717085 0.7594566661453519 0.9734100892180795 0.8293585346559026 0.7988084657500544 1.0035061929117803 0.8743523724796772 0.9462840362753014 1.0 11.907001159960444 -10.980202914816125 0.5101073664845427 1.0350035617622106 0.8794381690364832 0.1768229502491575 0.06992294749683636 1.8388301192238952 0.5506141640153406 0.1464694569279029 0.01535237670287564 1.0466394138908065e-11 10.980202914816125 -0.15556539272572745 RPES(ph)PSEISPIK ddPTM_A549_PD325901_60min_R1 4 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 RPES(0.982)PS(0.018)EISPIK;RPES(0.995)PS(0.005)EISPIK;RPES(0.987)PS(0.013)EISPIK;RPES(0.995)PS(0.005)EISPIK 123.02 3.887200000000001e-06 147937000.0 8319.7 7677.700000000001 7609.5 8285.6 9799.0 9878.5 8919.2 9704.5 9507.3 8994.5 11456.3 True False 9164.309819360575 8324.726723890497 8125.926429640772 8797.382694037107 9110.75204471481 9798.05277120624 9258.625036773514 9510.93613446703 9107.741243526334 8426.585734989027 10047.247727469208 0.9121214155300781 0.8285579244881827 0.8087713819800085 0.875601252468876 0.9067908238995626 0.975197689653688 0.921508585028754 0.9466210441357089 0.9064911596263063 0.8386959258455142 1.0 13.294512733318513 -8.743670103070674 0.018402288322862774 1.8521113612663875 2.1232721512951143e-06 0.0 0.059259530018360276 146.91723264422507 2.1583378950290033 108.98163520639237 107.79842565414121 1.8043878618529673e-09 8.743670103070674 -1.8521092379942363 RPESFTT(ph)PEGPKPR ddPTM_A549_PD325901_60min_R1 4 RPESFTTPEGPKPR 14 2 F8W8D3;Q14493;H7C4H8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 RPESFT(0.12)T(0.88)PEGPKPR;RPES(0.013)FT(0.158)T(0.829)PEGPKPR;RPES(0.006)FT(0.129)T(0.865)PEGPKPR;RPES(0.004)FT(0.047)T(0.949)PEGPKPR 94.20299999999999 1.8889e-05 237140000.0 22477.8 22965.800000000003 23408.0 23257.399999999998 24873.0 24530.1 23629.9 24836.3 24620.899999999998 24987.8 27272.4 True False 24759.729708718216 24901.208564482105 24996.607643738902 24693.95677661224 23126.006287191703 24330.33499852874 24529.148775277437 24340.920512799563 23586.16919448609 23410.066043555373 23918.067693987687 1.0351893817468414 1.0411045274673905 1.0450931054945685 1.0324394550827194 0.9668843897872618 1.017236647617846 1.0255489318413191 1.0176792215918917 0.9861235236998253 0.9787607570589822 1.0 14.54581322055258 -6.59473047739687 9.011841756504657 0.9979525447826206 1.0402377042028228 0.5689271942470518 0.016653286098622308 0.15932176192300473 18.361583331101812 0.0023845540493715703 0.00497105553867099 2.542550119398628e-07 6.59473047739687 0.04228515942020217 RPESPSEIS(ph)PIKGSVR ddPTM_A549_PD325901_60min_R1 1 RPESPSEISPIKGSVR 16 2 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 RPES(0.001)PS(0.007)EIS(0.991)PIKGS(0.001)VR 67.56 0.00045406 14961000.0 6268.2 6062.0 6923.7 5702.5 7518.1 6558.5 8059.5 7020.3 7796.9 6615.0 7594.8 True False 6904.5430495950495 6572.866014590847 7393.5839175903575 6054.730473682845 6990.054592036986 6505.089750463741 8366.208682827626 6880.27460918119 7469.223407450118 6197.327771077038 6660.6877474038865 1.0366111295768534 0.9868149151944152 1.1100331073877663 0.9090248189524838 1.0494493747678648 0.976639349742706 1.256057782634908 1.0329675958556819 1.1213892154547211 0.9304336137799808 1.0 12.701455434712685 RPET(ph)PK ddPTM_A549_PD325901_60min_R1 1 RPETPK 6 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;J3QQK4 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 RPET(1)PK 53.968 0.052299 6364500.0 2347.1 1989.2 2188.7 1979.8 2199.2 2059.8 1563.7 1675.5 1874.3 2124.4 2592.9 True False 2585.3758641563018 2156.8368650980065 2337.2383437222893 2102.087749547969 2044.735778828127 2043.0256717245131 1623.2074591894734 1642.080838095677 1795.5296890538239 1990.2650214476269 2273.989737747345 1.1369338309844008 0.9484813538492957 1.0278139364153858 0.9244051169862951 0.8991842596676267 0.8984322302827853 0.7138147689256733 0.7221144453019176 0.7895944556163688 0.875230432402575 1.0 11.151010028191095 -5.735133950205027 0.8560740729537695 0.8698601846816861 1.1383279729720703 0.48738681631954217 0.08753288339995303 1.264031525862277 1.028259395219888 0.017799646254978842 0.2717848475602739 1.8402043364952956e-06 5.735133950205027 0.2684677882903842 RPET(ph)PSSGPLDEEGAVAPVLANGHAPYSR ddPTM_A549_PD325901_60min_R1 2 RPETPSSGPLDEEGAVAPVLANGHAPYSR 29 1 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 H3BMG9 FAM65A Protein FAM65A 1 RPET(0.672)PS(0.164)S(0.164)GPLDEEGAVAPVLANGHAPYSR;RPET(0.587)PS(0.206)S(0.206)GPLDEEGAVAPVLANGHAPYSR 150.48 1.8945e-36 22991000.0 2631.8999999999996 2767.5 2149.0 3260.2 3885.1000000000004 3244.8999999999996 2363.8999999999996 2968.6000000000004 3348.9 2765.8 3260.6000000000004 True False 2899.0885504976245 3000.726937542093 2294.8440629867955 3461.575149548587 3612.2239788673855 3218.474610243164 2453.859508075715 2909.3889441783535 3208.157379113454 2591.16691598562 2859.5668706463784 1.0138208622630716 1.0493641426415765 0.8025145648956505 1.210524287815004 1.2632066820842962 1.1255112245427776 0.8581227923937456 1.0174229440281328 1.1219032546660748 0.9061396474354562 1.0 11.481580927857383 -6.268487601448175 24.991056844604547 1.0693372465481197 0.9646462846334778 0.1216764239665371 0.1272319138537204 859.7834713639598 3048558.8054228923 0.017404456434211495 0.04121738965032061 5.389052302085278e-07 6.268487601448175 -0.10469096191464189 RPETWES(ph)PEKPK ddPTM_A549_MK2206_60min_R1 4 RPETWESPEKPK 12 2 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 RPET(0.004)WES(0.996)PEKPK;RPET(0.212)WES(0.788)PEKPK;RPET(0.129)WES(0.871)PEKPK;RPET(0.368)WES(0.632)PEKPK 69.594 0.0007268 57191100.0 8853.1 8131.400000000001 7324.4 6479.599999999999 11994.1 9281.900000000001 8850.1 9508.4 11939.800000000001 12871.0 12885.9 True False 10347.286842486023 8545.253527982473 8363.110056177387 8067.102290880295 10229.7837784882 10264.104497173434 10458.048612450062 10856.244818253748 9235.454363942667 9963.43216070227 9685.975397252265 1.0682751522806222 0.8822295305856968 0.8634246643399331 0.8328642144980861 1.0561438945416073 1.0596872360511234 1.0797104249734952 1.1208210193609895 0.9534872829186204 1.0286452062978308 1.0 13.24168162310573 -6.769961907830237 24.999954277985687 1.0071553357944054 0.9061453439392242 0.3634315127530189 0.07433959545114703 194.18889518306798 569634.3788779225 0.011632382928110429 0.022237194343667874 1.6983926127301165e-07 6.769961907830237 -0.10100999185518122 RPETWES(ph)PEKPK ddPTM_A549_PD325901_60min_R1 1 RPETWESPEKPK 12 2 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 RPETWES(1)PEKPK 70.98 0.00056588 22761000.0 2865.8 2825.4 2452.3 2855.1 2806.1 3170.2 2419.0 3033.3 3105.5 2994.7 3544.6 True False 3156.733906309545 3063.5063737421638 2618.7278248778566 3031.4530425974367 2609.009216519466 3144.3829422764616 2511.0563687275903 2972.798451922184 2974.986634667154 2805.6141309213017 3108.636671070707 1.0154721314608541 0.9854822862547655 0.8424039545206449 0.9751712288568333 0.8392776295792861 1.0114990186979433 0.8077677240623645 0.9563029605831239 0.9570068648911871 0.9025223684165589 1.0 11.602066292954042 -9.384714972528554 1.0503589993183005 0.990161003048687 0.9264073873952408 0.0 0.07300929894407508 0.6197079298222964 1.4344069127554593 0.01678965524554084 0.013074919666786481 4.123680674726736e-10 9.384714972528554 -0.06375361565344628 RPEVDS(ph)PGETPSWAPQPK ddPTM_A549_PD325901_60min_R1 1 RPEVDSPGETPSWAPQPK 18 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RPEVDS(0.946)PGET(0.05)PS(0.004)WAPQPK 47.808 0.009016799999999998 3911500.0 2647.4 2742.1 2619.6 3102.5 3281.1 2858.9 2650.3 2932.7 3152.0 3124.0 3724.7 True False 2916.1620990871274 2973.1863904007873 2797.3818089344836 3294.13437871127 3050.6468551805056 2835.6180662652723 2751.1586167998094 2874.204997841356 3019.5324013752593 2926.750106854825 3266.5855128186713 0.8927248613708659 0.9101817107598951 0.8563626447117494 1.0084335358081067 0.9338946870391779 0.8680679122397975 0.8422123363995114 0.8798805316935548 0.9243696176102137 0.8959661687623756 1.0 11.673567691829474 -9.997735678670095 0.8498622968047879 0.9931188165780701 0.9012754666152504 0.0 0.051813844051716136 0.4141347135075471 0.605788144151931 0.01916802574633959 0.009135129629895327 1.0052274080087717e-10 9.997735678670095 -0.09184334996281973 RPGAPSLS(ph)PAPR ddPTM_A549_MK2206_60min_R1 2 RPGAPSLSPAPR 12 1 Q5QP82-2;Q5QP82 Q5QP82-2 DCAF10 DDB1- and CUL4-associated factor 10 1 RPGAPS(0.003)LS(0.997)PAPR;RPGAPS(0.155)LS(0.845)PAPR 93.51 0.00011052 51562000.0 2138.33 2286.9900000000002 1832.2400000000002 1980.3899999999999 3054.1000000000004 2470.01 2211.8 2473.3999999999996 3818.6 3373.8 3472.1000000000004 True False 2499.2278268508367 2403.3880224759137 2092.0791831863976 2465.5856389030837 2604.845935741805 2731.3848187400604 2613.655429997067 2824.012024469817 2953.693197051164 2611.656236794138 2609.881744914953 0.9576019418198881 0.9208800464460246 0.8015992246631739 0.9447116305966685 0.9980704837746157 1.0465550111846416 1.001445921865796 1.0820459700797063 1.1317344944099814 1.0006799127518489 1.0 11.349768723683368 -6.887981277937745 1.820692262697383 1.059993065556652 0.8942918333994824 0.5966430081564364 0.052630747333038685 0.18377655653721597 1.2303095220000075 0.009301296075785958 0.02070656036000174 1.2942516343241738e-07 6.887981277937745 -0.1657012321571697 RPGASPTGETPTIEEGEEDEDEAS(ph)EAEGAR ddPTM_A549_MK2206_60min_R1 1 RPGASPTGETPTIEEGEEDEDEASEAEGAR 30 1 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 1 RPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR 85.531 6.076300000000001e-07 1734500.0 267.75 407.49 0.0 340.61 472.62 312.16 393.35 275.87 122.83 499.53 538.49 True False 312.939654140994 428.229500469486 0.0 424.05946529056376 403.098224075928 345.19256400496215 464.8166033951294 314.9754173164424 95.00920111920448 386.6858260613478 404.7680714320594 0.7731332489586474 1.0579626474845722 0.0 1.0476603645891631 0.9958745576195683 0.8528156946363863 1.1483529364127456 0.7781627048844717 0.23472503842277945 0.9553268979276527 1.0 8.660951682861935 -8.537991078610856 24.981648739935206 0.6316635241914752 0.8395795988506418 0.0 0.3461780892146579 573.81657150793 948551.5182338448 0.06514461655194369 0.07387963865585921 2.897403106291126e-09 8.537991078610856 0.20791607465916662 RPGEPFNGQMVTEGRS(ph)QEEGEQK ddPTM_A549_MK2206_60min_R1 1 RPGEPFNGQMVTEGRSQEEGEQK 23 2 Q6ZMP0-4;Q6ZMP0 Q6ZMP0-4 THSD4 Thrombospondin type-1 domain-containing protein 4 1 RPGEPFNGQMVT(0.229)EGRS(0.771)QEEGEQK 43.622 0.019499000000000002 7301300.0 1652.7 1793.0 1609.2 1535.2 1819.8 1656.4 1517.7 1521.3 2246.3 2455.5 2620.3 True False 1931.6353553644096 1884.256041477799 1837.408757359054 1911.324068917746 1552.1098306744836 1831.6791485706665 1793.4464445729946 1736.948933785855 1737.516636603997 1900.8008445811845 1969.6071933989952 0.9807211112135223 0.9566659016035052 0.9328808117258126 0.9704087573011608 0.7880301391446347 0.9299718008288226 0.9105604663628406 0.8818758073219479 0.882164038813001 0.9650659537351354 1.0 10.943692220617255 -3.909731213520594 18.98235020422588 0.9309219230798453 0.923466470428266 0.0 0.05741377784292047 0.0 0.0 0.008296246921532269 0.0 0.0001231030424427501 3.909731213520594 -0.00745545265157932 RPGFS(ph)PTSHR ddPTM_A549_MK2206_60min_R1 4 RPGFSPTSHR 10 1 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 RPGFS(0.893)PT(0.107)SHR;RPGFS(0.491)PT(0.491)S(0.019)HR;RPGFS(0.968)PT(0.032)SHR;RPGFS(0.716)PT(0.248)S(0.036)HR 136.01 2.425e-07 336918000.0 3542.18 4273.06 3625.05 2664.4880000000003 3877.7400000000002 3302.3900000000003 3166.033 2928.03 4930.31 4364.16 5841.02 True False 4140.013386013615 4490.540502285065 4139.136599468327 3317.28767961341 3307.3295828111177 3651.846717850933 3741.260214305049 3343.0872192158 3813.6026570872355 3378.2932249592454 4390.533530049001 0.9429408425375151 1.0227778632258726 0.9427411432209544 0.7555545714227554 0.7532864878893674 0.8317546587123267 0.8521197227397771 0.7614307455655599 0.8685966366016282 0.7694493623242052 1.0 12.100180548884309 -10.340208566791508 0.916174384502251 0.9931248542363131 0.8580186904065504 0.0 0.1053484171486242 0.5814548424481589 0.9401306756939899 0.04562129170461447 0.01709143567835087 4.5686872901109786e-11 10.340208566791508 -0.1351061638297627 RPGFS(ph)PTSHR ddPTM_A549_PD325901_60min_R1 3 RPGFSPTSHR 10 1 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 RPGFS(0.997)PT(0.003)SHR;RPGFS(0.832)PT(0.127)S(0.04)HR;RPGFS(0.856)PT(0.143)S(0.001)HR 145.83 1.6498999999999998e-08 416476000.0 6959.870000000001 6550.049999999999 5971.24 6447.3 6887.549999999999 5936.04 5929.72 5863.900000000001 5901.079999999999 6181.02 7010.43 True False 7666.430878814503 7102.045700902475 6376.484254383095 6845.535078119315 6403.79224875758 5887.69885832779 6155.37873946729 5746.939914359445 5653.078129158479 5790.749342340529 6148.191552777245 1.2469407976320195 1.1551438565205987 1.0371316833000632 1.113422543744114 1.0415733136786987 0.9576310054406508 1.0011689919919293 0.9347366400390456 0.9194700719116152 0.9418622195863021 1.0 12.585946398932272 -5.07162013214571 0.4889938962860486 0.9591181133824721 1.4888737317599101 0.8483763378101049 0.03819982879946284 1.530460902683699 0.21242626709112986 0.008735114658448253 0.48385842631221176 8.479687895555244e-06 5.07162013214571 0.529755618377438 RPGFSPT(ph)SHR ddPTM_A549_PD325901_60min_R1 1 RPGFSPTSHR 10 1 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 RPGFS(0.268)PT(0.726)S(0.007)HR 48.948 0.011486 18824000.0 390.25 365.59 339.26 326.36 379.52 292.65 574.56 421.99 342.53 329.4 397.21 True False 429.86789271313404 396.39955233821655 362.2842237361097 346.5185159826626 352.86382447292226 290.2667554277981 596.425195211296 413.573078405249 328.13465528016127 308.60162778424444 348.3556881216488 1.2339913122446862 1.1379161180792616 1.0399836606359558 0.994726160066763 1.0129411877141479 0.8332482153310913 1.712115563340591 1.187214942966069 0.9419529132694219 0.8858808347532366 1.0 8.444417310287488 -8.764993769779718 24.96477457822494 0.9725888680389471 1.1395780832216766 0.1490557372007446 0.21083585161552845 147.9693901670051 1039281.4855940309 0.03633146040075856 0.03942918545104112 1.7179330317821302e-09 8.764993769779718 0.16698921518272958 RPGHPAQPLPLPQTAS(ph)SPQPQQK ddPTM_A549_MK2206_60min_R1 1 RPGHPAQPLPLPQTASSPQPQQK 23 1 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 RPGHPAQPLPLPQT(0.004)AS(0.498)S(0.498)PQPQQK 114.55 8.8241999999999995e-16 7533400.0 1336.3 1347.5 1251.5 1483.6 2086.1 1246.9 1384.7 1660.5 1940.4 1886.0 2112.8 True False 1561.8347706017182 1416.0819943621486 1428.9815186644637 1847.0820666013342 1779.2374534399598 1378.8461303747677 1636.2820661528804 1895.8809600679754 1500.9024981820767 1459.9512901161127 1588.1334496864463 0.9834405105629377 0.8916643589628651 0.8997868025175058 1.1630521773633151 1.1203324593353563 0.8682180522342129 1.030317739655909 1.1937793769423404 0.945073286176554 0.9192875387168242 1.0 10.633116430840476 RPGHPAQPLPLPQTAS(ph)SPQPQQK ddPTM_A549_PD325901_60min_R1 2 RPGHPAQPLPLPQTASSPQPQQK 23 1 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 RPGHPAQPLPLPQT(0.015)AS(0.575)S(0.41)PQPQQK;RPGHPAQPLPLPQT(0.002)AS(0.499)S(0.499)PQPQQK 115.01 8.503e-16 33228000.0 2839.0 2821.5 2743.2 3175.6 3428.3 3063.2 3069.4 2885.7 3312.8999999999996 3180.9 3263.8 True False 3127.2131900386603 3059.277707055112 2929.3700482016634 3371.7495996891253 3187.5080349929376 3038.2543148007217 3186.2076966401264 2828.142449712144 3173.6703339200844 2980.0574311442106 2862.3732909328482 1.0925245843876292 1.0687906139796646 1.023406016776722 1.1779559327114428 1.1135892181114253 1.0614458723552977 1.1131349313288696 0.9880410981582529 1.1087548727391123 1.0411141833191886 1.0 11.482996115307886 -11.000716874668836 0.8124246728687943 0.9887118957619612 1.0848819984617994 0.1773625378991056 0.048988133531986285 0.8880713178262101 0.8247452018214323 0.05971409825360099 0.008492976257588243 9.98350696672059e-12 11.000716874668836 0.09617010269983828 RPGHPAQPLPLPQTASS(ph)PQPQQK ddPTM_A549_MK2206_60min_R1 1 RPGHPAQPLPLPQTASSPQPQQK 23 1 O60346 O60346 PHLPP1 PH domain leucine-rich repeat-containing protein phosphatase 1 1 RPGHPAQPLPLPQT(0.004)AS(0.169)S(0.827)PQPQQK 99.387 1.9255e-08 12712000.0 943.08 1147.3 1040.1 1123.0 1523.3 1204.3 931.16 1060.8 1677.4 1498.2 1492.5 True False 1102.248847907706 1205.6926694854867 1187.6018198664874 1398.135050413386 1299.2245879033078 1331.7382266503585 1100.3397188697302 1211.1716485637517 1297.4715782573776 1159.7555794549107 1121.8710590955234 0.98250938819686 1.0747159040340537 1.0585902989813798 1.2462528907204296 1.1580872662414259 1.1870688844795003 0.9808076516002184 1.079599690841677 1.156524689480293 1.0337690504200463 1.0 10.131691155712913 -10.97172646245836 1.196339665955413 0.9990325543148787 1.1096597767345597 0.1433079441442492 0.07837532000045512 0.6411554032943384 1.608227521861414 0.05908940522216637 0.013149091188808195 1.067268121433067e-11 10.97172646245836 0.11062722241968104 RPGNSTVTSS(ph)PPVT(ph)PK ddPTM_A549_PD325901_60min_R1 1 RPGNSTVTSSPPVTPK 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 2 RPGNS(0.014)T(0.014)VT(0.069)S(0.442)S(0.488)PPVT(0.974)PK 54.672 0.0056803999999999995 10877000.0 3431.3 3409.2 3972.7 3857.0 4092.1 3969.3 3809.4 3670.1 4513.8 4429.9 4199.3 True False 3779.643050010448 3696.505248588441 4242.311311785778 4095.238130117445 3804.685012978618 3936.975336817219 3954.368801583666 3596.89697636225 4324.100683162326 4150.195357988537 3682.812721555951 1.0262924932043753 1.0037179536587202 1.1519215427260294 1.1119865276199135 1.0330921772669388 1.0690131794575444 1.07373605462973 0.9766711609605273 1.1741299409152246 1.1269091511759308 1.0 11.84659231981662 RPGPGTLY(ph)DVPR ddPTM_A549_PD325901_60min_R1 2 RPGPGTLYDVPR 12 1 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 RPGPGTLY(1)DVPR;RPGPGT(0.01)LY(0.99)DVPR 149.69 1.5211e-12 30158000.0 3373.62 2550.7 2731.62 3146.05 3175.9 2829.02 2797.59 3287.1 3267.0 3431.9700000000003 2766.8999999999996 True False 3716.1074188722187 2765.6564406824273 2917.0041597654667 3340.3743633020454 2952.8357402602073 2805.9813990785906 2904.0538183499875 3221.5362118199346 3129.699351298533 3215.274828496337 2426.5888408242217 1.531412061389846 1.139730140579991 1.2021007064281517 1.3765720451295922 1.2168669411902673 1.1563481014465984 1.1967638561148204 1.3275987087807175 1.289752634910944 1.3250183856463413 1.0 11.244713964822001 -10.725415933430728 0.7948050886825873 0.9847328502333389 1.264360350010935 0.0 0.14366430812890818 0.5175941924894542 0.5302447470957776 0.09194095101707184 0.01929888754280148 1.881845940691184e-11 10.725415933430728 0.27962749977759616 RPGS(ph)AATTKPIVR ddPTM_A549_PD325901_60min_R1 2 RPGSAATTKPIVR 13 2 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RPGS(0.993)AAT(0.004)T(0.004)KPIVR;RPGS(0.999)AATTKPIVR 60.208999999999996 0.0016907 13325700.0 2066.54 2484.7 2054.7 2649.2 3039.8999999999996 2498.1000000000004 2657.8 2630.0 2720.6 2814.2 3485.7 True False 2276.3336194936583 2694.094389055409 2194.1442979148296 2812.835067230266 2826.387911085678 2477.756301842416 2758.944033403966 2577.5425868049115 2606.2626431413487 2636.5109317256242 3056.9809976728457 0.7446345336220728 0.8812924879501419 0.7177487526370434 0.9201349532010705 0.9245683611501972 0.8105239462491362 0.9025061115866395 0.8431660480608447 0.8525609564224932 0.8624557803050434 1.0 11.577891869059572 -14.99999999999987 0.1734739523259238 1.6326754080363968 0.8082461114953289 0.09809396835722206 0.07355279520538197 32.29797733349253 0.3509031713641723 6.939498125281234 0.0737957662727152 1.0000000000002987e-15 14.99999999999987 -0.8244292965410679 RPGS(ph)PGSR ddPTM_A549_MK2206_60min_R1 1 RPGSPGSR 8 1 Q8IYX0 Q8IYX0 ZNF679 Zinc finger protein 679 1 RPGS(1)PGSR 54.191 0.015252000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RPGS(ph)PGSR ddPTM_A549_PD325901_60min_R1 1 RPGSPGSR 8 1 Q8IYX0 Q8IYX0 ZNF679 Zinc finger protein 679 1 RPGS(1)PGSR 47.082 0.052098 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RPGS(ph)VSSTDQER ddPTM_A549_MK2206_60min_R1 8 RPGSVSSTDQER 12 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RPGS(0.99)VS(0.006)S(0.002)T(0.003)DQER;RPGS(1)VSSTDQER;RPGS(0.998)VS(0.002)STDQER;RPGS(0.987)VS(0.005)S(0.004)T(0.005)DQER;RPGS(0.982)VS(0.006)S(0.006)T(0.006)DQER;RPGS(0.996)VS(0.003)S(0.001)TDQER;RPGS(0.646)VS(0.118)S(0.118)T(0.118)DQER;RPGS(0.988)VS(0.007)S(0.004)T(0.001)DQER 166.04 5.2495e-15 220878000.0 7459.870000000002 6838.19 6371.43 5978.31 7057.58 5787.260000000001 5309.2300000000005 5063.030000000001 8489.68 9281.22 9471.660000000002 True False 8718.913679689176 7186.224662728979 7274.994580474892 7442.996218376536 6019.419331119695 6399.6640119277245 6273.8483672137345 5780.730007379081 6566.781035233153 7184.585955912763 7119.58541748255 1.2246378361132355 1.0093599895694478 1.0218284006552862 1.045425510325339 0.8454732934783907 0.8988815551272105 0.8812097895206005 0.811947559921701 0.9223544139393349 1.0091298207154873 1.0 12.797577518331828 -3.4463509012848696 0.7663446503713538 0.9373437875624737 5.583197492414675 0.6146075185031965 0.06823539657786398 19.357087687030393 0.8122380412248645 0.011623757638526099 137.3601325295655 0.0003578072191760536 3.4463509012848696 4.6458537048522 RPGS(ph)VSSTDQER ddPTM_A549_PD325901_60min_R1 5 RPGSVSSTDQER 12 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RPGS(0.999)VS(0.001)STDQER;RPGS(0.979)VS(0.013)S(0.003)T(0.005)DQER;RPGS(0.993)VS(0.006)S(0.001)TDQER;RPGS(1)VSSTDQER;RPGS(0.892)VS(0.036)S(0.036)T(0.036)DQER 147.75 2.3290000000000003e-12 245361900.0 5040.72 4695.91 4678.049999999999 5063.46 5485.9400000000005 5579.08 5338.74 5267.81 5524.619999999999 6719.03 6995.610000000001 True False 5552.4501836180625 5091.650815997576 4995.5306043998935 5376.218424247988 5100.626499865581 5533.645822218077 5541.908672170626 5162.739397033004 5292.439433783564 6294.789299123169 6135.194318825523 0.9050161893944678 0.8299086469639783 0.814241627045352 0.8762914660667459 0.8313716297810773 0.901951190891929 0.9032979860418715 0.8414956607309745 0.8626359914214926 1.0260130277875532 1.0 12.582893323475494 -10.830969737592332 0.5176067213065912 1.0339306085734445 0.8573609071757603 0.7684277548469403 0.03152938547342753 0.6238657704732333 0.2112492438086027 0.055742264581881286 0.007169303314002568 1.475809366700092e-11 10.830969737592332 -0.17656970139768424 RPGT(ph)SPALLQGTAEEDHVDLSLSCTLVPR ddPTM_A549_PD325901_60min_R1 2 RPGTSPALLQGTAEEDHVDLSLSCTLVPR 29 1 P38936 P38936 CDKN1A Cyclin-dependent kinase inhibitor 1 1 RPGT(0.499)S(0.499)PALLQGT(0.003)AEEDHVDLSLSCTLVPR;RPGT(0.5)S(0.5)PALLQGT(0.001)AEEDHVDLSLSCTLVPR 58.49 0.00086078 2458100.0 987.8700000000001 1137.67 1118.62 1247.18 1389.3400000000001 1532.29 1125.13 1309.18 1110.21 1386.43 1306.54 True False 1088.1578351685428 1233.5454435532129 1194.5362800085104 1324.2154760487101 1291.7575513628008 1519.8115382691303 1167.9474378447599 1283.0673778681585 1063.5517345592732 1298.8905731903756 1145.8438628394529 0.949656293024111 1.0765388580049917 1.0424948099371893 1.155668341031425 1.127341685246511 1.3263687903367294 1.0192902154666459 1.1197576035260681 0.928182075281831 1.1335668107273063 1.0 10.16219475488796 -8.755244313704729 24.981789244732628 0.9660859781403183 1.1066350951732062 0.04364672721643614 0.10410486893092526 125.77336969003892 507184.3943110614 0.015633494454559298 0.017509384797497588 1.7569349666990848e-09 8.755244313704729 0.14054911703288797 RPGTQGHLGPEKEEEES(ph)DGEPEDSSTS ddPTM_A549_MK2206_60min_R1 10 RPGTQGHLGPEKEEEESDGEPEDSSTS 27 2 Q8IYB7;H7C1Q8 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 RPGTQGHLGPEKEEEES(0.996)DGEPEDS(0.002)S(0.002)TS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(0.998)DGEPEDSST(0.001)S(0.001);RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(0.514)DGEPEDS(0.117)S(0.117)T(0.126)S(0.126);RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(0.988)DGEPEDS(0.003)S(0.003)T(0.003)S(0.003);RPGT(0.007)QGHLGPEKEEEES(0.939)DGEPEDS(0.02)S(0.02)T(0.007)S(0.007);RPGT(0.001)QGHLGPEKEEEES(0.999)DGEPEDSSTS 153.86 6.9528e-35 620985400.0 10859.000000000002 11564.640000000001 10982.88 10883.880000000003 16588.96 12378.269999999999 11875.29 11803.73 17723.51 17847.32 17658.87 True False 12691.733722939502 12153.230779428783 12540.417532328853 13550.431088595938 14148.74595926243 13688.130315369364 14032.876476756443 13476.94487490705 13709.163283629665 13815.598016497932 13273.68521898169 0.9561575036290613 0.9155882920930933 0.9447577914832389 1.0208492114321421 1.0659244758214834 1.0312230619869611 1.0571952133299871 1.0153129784661983 1.0328076233136245 1.040826099803941 1.0 13.696281346266721 -6.24324087389197 4.845737076619109 1.023905099527869 0.9351844683682079 0.796626001609839 0.02084974660741011 0.07291420872483087 4.8570014160513 0.0032589660030194695 0.008550608334058192 5.711617638530663e-07 6.24324087389197 -0.088720631159661 RPGTQGHLGPEKEEEES(ph)DGEPEDSSTS ddPTM_A549_PD325901_60min_R1 7 RPGTQGHLGPEKEEEESDGEPEDSSTS 27 2 Q8IYB7;H7C1Q8 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(0.996)DGEPEDS(0.003)S(0.001)TS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGT(0.005)QGHLGPEKEEEES(0.993)DGEPEDS(0.001)S(0.001)TS 162.0 1.3075e-41 1056835900.0 14804.17 16456.960000000003 15637.7 16077.109999999999 17948.57 15868.36 15562.18 17484.879999999997 17937.390000000003 17510.88 18892.159999999996 True False 16307.078440146068 17843.845774906156 16698.968359129187 17070.156570934007 16687.92436240504 15739.133337297997 16154.407275851645 17136.130351777 17183.543877254004 16405.240048374515 16568.54408726942 0.9842191537321465 1.0769712583628048 1.0078718003931304 1.0302749886183424 1.0072052362903356 0.9499406377770568 0.97500463473215 1.0342568581474632 1.0371185172786017 0.9901437303099926 1.0 14.016159215038288 -6.761454208768207 24.984836176875472 1.0101261063033555 1.027346762553507 0.06635823358819382 0.032174929242572085 1.0641442521455935 1787495.4474609746 0.004843683130304403 0.009593709741333065 1.7319916392172103e-07 6.761454208768207 0.017220656250151567 RPHPQHSQQPPPPQQER ddPTM_A549_MK2206_60min_R1 1 RPHPQHSQQPPPPQQER 17 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;H7C3Z6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 0 34.909 0.031217 1784400.0 142.21 211.2 153.12 107.12 260.11 189.41 144.85 0.0 171.03 152.56 373.99 False True 166.21157129931183 221.94917789186331 174.8347184481843 133.36440480879955 221.84816356563343 209.45324047981768 171.16737003123035 0.0 132.29197807878813 118.09659004247841 281.11796140109533 0.5912520511706593 0.7895232904566678 0.6219265306877083 0.4744072706849101 0.7891639597126399 0.7450724223948558 0.6088809451311119 0.0 0.47059240690080173 0.4200962096263205 1.0 8.135031824198954 -10.757048298857104 1.1149608825942607 0.9897078112751586 0.5653406483694565 0.0 0.26697233957722244 0.43349528020419487 0.9917199011223705 0.13470475075983085 0.03789832852091673 1.74965209509589e-11 10.757048298857104 -0.4243671629057021 RPHPQHSQQPPPPQQER ddPTM_A549_PD325901_60min_R1 2 RPHPQHSQQPPPPQQER 17 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;H7C3Z6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 0 ; 76.85 0.00013184 4800700.0 621.5500000000001 443.48 618.78 369.85 631.4300000000001 366.32000000000005 349.25 467.92999999999995 570.94 592.12 765.31 False True 684.6492984390736 480.8536159931955 660.7741318264167 392.69479450970647 587.080535115244 363.336811373009 362.5408998669333 458.59676906601646 546.9453772973322 554.7334421481684 671.181721699803 1.0200654700565492 0.7164283538225809 0.9844936333381836 0.5850796912573636 0.8746968460768443 0.5413389543041182 0.5401531182177897 0.6832676669212565 0.814899094558422 0.8265026060949288 1.0 9.39055961715539 -9.821364146870758 0.9934901389346463 0.9719777930939287 0.7413328697971097 0.1100684132848222 0.16241938150451152 0.4583185147758859 0.9287023452715248 0.05134792358600587 0.03052046658399007 1.5088145141111395e-10 9.821364146870758 -0.23064492329681907 RPHS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 RPHSPEK 7 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 RPHS(1)PEK 51.445 0.020804 216720000.0 2947.9 2691.5 1883.1 1115.0 1700.4 1929.0 1504.5 1665.2 1622.4 3320.8 3582.0 True False 3445.433450764652 2828.4858536740066 2150.151895962487 1388.1750500542514 1450.273412506259 2133.1254996334314 1777.8481754365637 1901.2471994611224 1254.9289904404245 2570.6289736042363 2692.4905418292574 1.2796455167578236 1.0505091140458955 0.798573611516455 0.5155728603269804 0.5386364000079104 0.7922499509261794 0.6602987634744697 0.7061295740594987 0.46608482776241633 0.9547402056453542 1.0 11.394725561546707 -5.630139784564044 2.3846189190201095 0.7082200826073893 1.2649096167633191 0.5611384142252627 0.160506633512795 0.2265996841121414 2.3338072246584867 0.028520750138778507 0.18742045784768854 2.3434744095269645e-06 5.630139784564044 0.5566895341559298 RPHS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 RPHSPEK 7 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 RPHS(1)PEK;RPHS(1)PEK 106.88 0.0039326 678700000.0 19491.5 18321.2 13673.599999999999 12636.3 14586.900000000001 10654.0 8353.6 10017.400000000001 12263.5 17814.0 22766.0 True False 21470.26273111608 19865.191822257002 14601.5727220364 13416.8155518805 13562.366466073117 10567.237356322441 8671.500819265324 9817.595098501728 11748.107742470027 16689.220999843747 19965.92632556445 1.0753451846421707 0.9949546792037158 0.7313245818873172 0.6719856285706892 0.6792755940758837 0.5292635655372577 0.43431497631854427 0.49171748600170084 0.5884078479958981 0.8358851338880682 1.0 14.285252387372958 -5.714464168692872 3.6860248621585234 0.7159996798494807 1.057900012878161 0.4222290269090039 0.15945364123972183 0.23817035742015497 6.505301439709719 0.030130483856445033 0.129858949237768 1.92990455568974e-06 5.714464168692872 0.3419003330286804 RPHS(ph)PEKAFSSNPVVR ddPTM_A549_MK2206_60min_R1 2 RPHSPEKAFSSNPVVR 16 2 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 RPHS(1)PEKAFSSNPVVR;RPHS(0.999)PEKAFS(0.001)S(0.001)NPVVR 61.766999999999996 0.00078682 48563000.0 2528.3 3407.1 2845.4 2714.0 4275.799999999999 2619.0 2698.6000000000004 2400.9 5029.0 5640.9 6104.6 True False 2955.015228999718 3580.506837099277 3248.920505959142 3378.930121836091 3646.835484118007 2896.1408416485024 3188.9006887558057 2741.2349274478784 3889.939529662781 4366.616772224806 4588.659341611077 0.6439822634473914 0.7802947594366773 0.7080326221859927 0.7363654327518132 0.7947496670863355 0.6311518519985988 0.6949525888396377 0.5973934265700864 0.8477289857601467 0.951610578851924 1.0 12.163856990865114 -9.297240269520149 1.315619398867878 0.9591677562760418 0.7050336982135459 0.7157519778069412 0.06580195007048117 0.1421785373616026 0.510672191595762 0.01603836127752887 0.01366664780789601 5.043821754528528e-10 9.297240269520149 -0.2541340580624959 RPHS(ph)PEKAFSSNPVVR ddPTM_A549_PD325901_60min_R1 2 RPHSPEKAFSSNPVVR 16 2 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 RPHS(0.994)PEKAFS(0.003)S(0.003)NPVVR;RPHS(1)PEKAFSSNPVVR 69.122 0.00036436 34800000.0 5310.5 5645.5 5264.2 6142.799999999999 7492.4 7979.4 5241.9 7053.5 7144.799999999999 7085.099999999999 7256.700000000001 True False 5849.618050616526 6121.266097883971 5621.460268206181 6522.2268046889885 6966.159671376798 7914.418411961637 5441.383372977744 6912.812409136293 6844.528902711287 6637.745576849267 6364.171904011401 0.9191483415037003 0.9618322996626908 0.8832979927306676 1.024835108645944 1.0945901173703303 1.243589665919159 0.8550025761478859 1.086207681596262 1.0754783192448198 1.0429865309994895 1.0 12.635757089802334 -6.37677399361882 5.542865211947213 1.046201054341762 0.926118108783268 0.30485383667912624 0.08828495348936526 0.2285050359109314 9.58441091673623 0.01210182362331285 0.028549714174079834 4.1997748296309473e-07 6.37677399361882 -0.12008294555849397 RPHT(ph)PAER ddPTM_A549_PD325901_60min_R1 1 RPHTPAER 8 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 RPHT(1)PAER 64.266 0.005867600000000001 7477000.0 790.72 629.3 693.57 694.3 818.02 725.22 651.14 812.19 1016.6 846.57 848.45 True False 870.9933123027016 682.3333195285423 740.6398309752218 737.1853341302935 760.5650972157991 719.3140487659246 675.9194890174798 795.9902332992707 973.8758373217293 793.1174257234604 744.0960287676871 1.1705388533589833 0.9169963192231636 0.9953551723717848 0.9907126306683312 1.0221329879631085 0.9666951857775609 0.9083766918322143 1.06974127333743 1.3088039710876904 1.0658804711496157 1.0 9.539345009074344 -8.523069925163993 24.99921738338073 1.1481108634668213 0.9922297715893797 0.2548791941949312 0.09561512213243191 7.054382644606787 922343.4547419942 0.02057398069873913 0.02344349570187328 2.9986796667813557e-09 8.523069925163993 -0.1558810918774416 RPHT(ph)PTPGIYMGR ddPTM_A549_MK2206_60min_R1 18 RPHTPTPGIYMGR 13 1 P62995;H7BXF3;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.99)PT(0.01)PGIYMGR;RPHT(0.774)PT(0.226)PGIYMGR;RPHT(0.994)PT(0.006)PGIYMGR;RPHT(0.932)PT(0.068)PGIYMGR;RPHT(0.873)PT(0.127)PGIYMGR;RPHT(0.948)PT(0.05)PGIY(0.002)MGR;RPHT(0.995)PT(0.005)PGIYMGR;RPHT(0.819)PT(0.181)PGIYMGR;RPHT(0.874)PT(0.126)PGIYMGR;RPHT(0.994)PT(0.006)PGIYMGR;RPHT(0.999)PT(0.001)PGIYMGR;RPHT(0.978)PT(0.022)PGIYMGR;RPHT(1)PTPGIYMGR;RPHT(0.986)PT(0.014)PGIYMGR;RPHT(0.999)PT(0.001)PGIYMGR;RPHT(0.95)PT(0.05)PGIYMGR;RPHT(0.999)PT(0.001)PGIYMGR;RPHT(0.753)PT(0.246)PGIYMGR 128.9 1.8811e-08 4580131900.0 31204.739999999998 30816.739999999998 29495.399999999994 27989.069999999996 42947.020000000004 32531.759999999995 28723.280000000002 31931.929999999997 44380.29 44461.03999999999 44181.21999999999 True False 36471.337229354394 32385.180437061073 33678.291239005855 34846.39340647711 36629.570249573386 35974.249250365414 33941.92817584147 36458.3788649343 34328.22517576014 34417.260184466664 33209.803734359986 1.0982099599588995 0.9751692812190357 1.0141069037442445 1.0492803174992524 1.102974607816643 1.083241850452288 1.0220454311424914 1.0978197630000814 1.033677448091721 1.0363584337855452 1.0 15.019321576274375 -9.668668067458931 1.1061536530363383 1.0063679062796256 1.052196954155009 0.09007821687384154 0.03966476389549999 0.5194011723931092 1.3084345042088132 0.011244740989571208 0.007661462962192892 2.1445290447196149e-10 9.668668067458931 0.04582904787538333 RPHT(ph)PTPGIYMGR ddPTM_A549_PD325901_60min_R1 15 RPHTPTPGIYMGR 13 1 P62995;H7BXF3;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.969)PT(0.03)PGIY(0.001)MGR;RPHT(0.91)PT(0.082)PGIY(0.008)MGR;RPHT(0.887)PT(0.113)PGIYMGR;RPHT(0.982)PT(0.018)PGIYMGR;RPHT(0.975)PT(0.017)PGIY(0.008)MGR;RPHT(0.769)PT(0.231)PGIYMGR;RPHT(0.939)PT(0.061)PGIYMGR;RPHT(0.989)PT(0.011)PGIYMGR;RPHT(0.992)PT(0.008)PGIYMGR;RPHT(0.999)PT(0.001)PGIYMGR;RPHT(0.99)PT(0.01)PGIYMGR;RPHT(0.998)PT(0.002)PGIYMGR;RPHT(0.971)PT(0.029)PGIYMGR;RPHT(0.913)PT(0.087)PGIYMGR;RPHT(0.99)PT(0.01)PGIYMGR 130.29 1.6554e-08 6521115000.0 42925.7 43924.8 45231.3 45849.50000000001 51807.2 47632.1 42766.50000000001 45563.799999999996 47092.200000000004 51726.299999999996 55030.60000000001 True False 47283.48546376984 47626.497050098995 48300.96801590255 48681.51948323043 48168.44099713739 47244.19996997241 44394.00256022674 44654.99426489039 45113.078601536814 48460.2925903344 48262.18506771531 0.9797211916001671 0.9868284451538114 1.0008035887337638 1.0086886744751975 0.9980576082403564 0.9789071900429996 0.9198506552892035 0.9252584441055917 0.9347500229888043 1.004104818759058 1.0 15.55860561451865 -7.525417932948134 24.9692342476435 0.9605400871338302 0.9947792048358176 0.32001626004203754 0.026200268892148104 95.52469829054276 939347.5401427276 0.004828006069098569 0.007185307957089213 2.98251108897349e-08 7.525417932948134 0.0342391177019874 RPHT(ph)PTPGIYMGRPT(ph)YGSSR ddPTM_A549_PD325901_60min_R1 1 RPHTPTPGIYMGRPTYGSSR 20 2 P62995;H7BXF3;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 2 RPHT(0.982)PT(0.019)PGIY(0.001)MGRPT(0.407)Y(0.001)GS(0.285)S(0.305)R 40.104 0.029584 9034500.0 1966.0 1846.1 1817.5 1749.6 2776.7 2593.9 1962.7 2080.0 2974.0 2864.2 2568.9 True False 2165.5868727072943 2001.6773258885123 1940.8464795153548 1857.6688183701015 2581.6741710949714 2572.776138404805 2037.3916225306514 2038.512768271566 2849.013122363588 2683.3539231925683 2252.94158559881 0.9612263746872525 0.8884728031492596 0.8614721712811283 0.8245525894877346 1.145912609362567 1.1419630916533443 0.9043250990411864 0.9048227354415623 1.2645747855048572 1.191044606014212 1.0 11.137594192438963 -6.762810887859134 24.99908218534323 1.096240921738901 0.8826511859858026 0.41293161479706497 0.11063812455312716 30.434473403488642 554760.071845595 0.019136023224454256 0.037620992454989864 1.7265895662166745e-07 6.762810887859134 -0.21358973575309848 RPHT(ph)PTPGIYMGRPTYGSSR ddPTM_A549_MK2206_60min_R1 10 RPHTPTPGIYMGRPTYGSSR 20 2 P62995;H7BXF3;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.998)PT(0.002)PGIYMGRPTYGSSR;RPHT(0.98)PT(0.02)PGIYMGRPTYGSSR;RPHT(0.992)PT(0.008)PGIYMGRPTYGSSR;RPHT(0.981)PT(0.019)PGIYMGRPTYGSSR;RPHT(0.987)PT(0.012)PGIYMGRPTYGSSR;RPHT(0.825)PT(0.175)PGIYMGRPTYGSSR;RPHT(0.803)PT(0.194)PGIY(0.002)MGRPTYGSSR;RPHT(1)PTPGIYMGRPTYGSSR;RPHT(0.8)PT(0.199)PGIYMGRPTYGSSR;RPHT(0.994)PT(0.006)PGIYMGRPTYGSSR 213.57 5.401699999999999e-67 1529864000.0 13788.449999999997 14746.13 14289.13 11444.170000000002 20235.100000000002 15743.690000000002 14801.890000000001 13666.71 23501.989999999998 22961.78 23702.17 True False 16115.603264763338 15496.645031186286 16315.543498037507 14247.992163748324 17258.543595274874 17409.67682598437 17491.20181423243 15604.00799504403 18178.826789966075 17774.697950351194 17816.2670423867 0.90454432606015 0.8698031408217111 0.9157666675752659 0.799718152509216 0.9686958302889744 0.9771787089049009 0.9817545826305306 0.8758292608614655 1.020349927777621 0.997666790021916 1.0 14.120907467049111 -7.536706640355229 0.5754817212831752 1.0087112155212252 0.872080220366932 0.4124765426668977 0.05054084193421684 0.5123830275872818 0.3360060152941727 0.011804528747376766 0.028874476548526283 2.905984942463684e-08 7.536706640355229 -0.13663099515429322 RPHT(ph)PTPGIYMGRPTYGSSR ddPTM_A549_PD325901_60min_R1 10 RPHTPTPGIYMGRPTYGSSR 20 2 P62995;H7BXF3;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.991)PT(0.009)PGIYMGRPTYGSSR;RPHT(0.833)PT(0.167)PGIYMGRPTYGSSR;RPHT(0.969)PT(0.031)PGIYMGRPTYGSSR;RPHT(0.892)PT(0.107)PGIY(0.001)MGRPTYGSSR;RPHT(0.998)PT(0.002)PGIYMGRPTYGSSR;RPHT(0.996)PT(0.004)PGIYMGRPTYGSSR;RPHT(0.971)PT(0.029)PGIYMGRPTYGSSR;RPHT(0.935)PT(0.065)PGIYMGRPTYGSSR;RPHT(0.995)PT(0.005)PGIYMGRPTYGSSR;RPHT(0.976)PT(0.024)PGIYMGRPTYGSSR 199.3 2.7291e-55 2050019000.0 18336.489999999998 17802.15 19596.6 20792.870000000003 20452.7 21819.199999999997 19476.899999999998 21368.3 22271.530000000002 20338.15 25315.000000000004 True False 20197.99696618951 19302.399657150858 20926.543119928803 22077.198355865996 19016.17290998457 21641.5116693327 20218.104087668624 20942.09249339295 21335.535045431843 19053.995738069614 22201.415485006768 0.9097616762241928 0.8694220271759836 0.9425769782138926 0.9944049905635675 0.8565297524757698 0.9747807153984309 0.910667344670995 0.943277355785523 0.9609988633310486 0.8582333748466311 1.0 14.438364040273449 -8.793044651236624 0.012737316876420499 1.9101660675943963 1.7227806072798465e-07 0.0 0.05679723763087609 374.2057328395228 3.7320697859458716 281.02971653457575 278.10526531037755 1.6104800479431815e-09 8.793044651236624 -1.9101658953163356 RPHTPT(ph)PGIYMGRPTYGSSR ddPTM_A549_MK2206_60min_R1 2 RPHTPTPGIYMGRPTYGSSR 20 2 P62995;H7BXF3;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.396)PT(0.604)PGIYMGRPTYGSSR;RPHT(0.484)PT(0.516)PGIYMGRPTYGSSR 117.36 2.0255e-14 57823000.0 2635.92 2119.33 2352.21 1692.9900000000002 3139.3599999999997 3139.93 2717.2 2155.23 3360.6800000000003 3658.5 3743.4 True False 3080.7988539433354 2227.194844609671 2685.7887479166893 2107.772626001209 2677.5643026850444 3472.195308483151 3210.8800679935057 2460.7404526150585 2599.4913459031854 2832.0423090614013 2813.810467415869 1.0948849930083109 0.791522695078702 0.9545023657486243 0.749081237137103 0.951579480455928 1.233983364797106 1.141114550953496 0.8745224602405218 0.9238331351757645 1.0064794135414088 1.0 11.458309439488092 -6.992079227265879 24.936167126064568 0.991581150756637 0.8885412282706623 0.1604702901925802 0.12630941189179518 312.29743706956145 983165.0029596824 0.01856661490795287 0.035043069409966314 1.0184055859001312e-07 6.992079227265879 -0.10303992248597471 RPHTPTPGIY(ph)MGR ddPTM_A549_MK2206_60min_R1 1 RPHTPTPGIYMGR 13 1 P62995;H7BXF3;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.282)PT(0.058)PGIY(0.661)MGR 64.827 0.00098472 956530000.0 2135.7 1939.0 2149.0 1769.8 2342.9 2266.6 2460.4 2094.4 2852.0 3460.7 2916.1 True False 2496.1539471481624 2037.6868178613784 2453.7605142708217 2203.401079449341 1998.262513620862 2506.4501075526878 2907.422832066547 2391.287613830997 2206.0265537081445 2678.925466439466 2191.951889734309 1.138781356853013 0.9296220539349386 1.1194408626223302 1.0052232851316913 0.911636118921878 1.143478613418153 1.3264081413844178 1.0909398262937466 1.0064210642759779 1.2221643545124452 1.0 11.09800041817794 -8.768323894250853 21.59884303697793 1.003032120788216 1.0810799956150157 0.0 0.12592288370620344 54.91781469441419 172292.88097182795 0.01919664509726237 0.020698964341616194 1.7048104772192135e-09 8.768323894250853 0.07804787482679965 RPIAIKS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RPIAIKSPK 9 2 O95714;Q9BVR0 O95714 HERC2;HERC2P3 E3 ubiquitin-protein ligase HERC2;Putative HERC2-like protein 3 1 RPIAIKS(1)PK 48.004 0.0068263 17737000.0 2111.4 1734.4 1887.1 1682.3 2404.0 1616.1 1616.5 1947.5 2568.1 2399.1 2242.3 True False 2467.752701226121 1822.6735517786353 2154.7191561100362 2094.463575521318 2050.3747845595444 1787.114629319643 1910.1971256850804 2223.5640889686124 1986.4294504130025 1857.1416437526862 1685.4750256682687 1.4641289035105636 1.0814005096610488 1.278404677195213 1.242654767127677 1.2164966868889664 1.0603032392076386 1.1333286442068238 1.319250689037649 1.178557629250786 1.1018505854255265 1.0 10.718939535175267 -14.99999999999958 0.13721067501446949 0.24502322160418855 1.296255674601244 0.28060086536954754 0.10818292231144139 50.267077796905106 0.46566161360861724 10.31154573472137 0.2508424581523955 1.0000000000009652e-15 14.99999999999958 1.0512324529970554 RPIAIKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 RPIAIKSPK 9 2 O95714;Q9BVR0 O95714 HERC2;HERC2P3 E3 ubiquitin-protein ligase HERC2;Putative HERC2-like protein 3 1 RPIAIKS(1)PK 63.727 0.0013549 22915000.0 2270.0 2922.2 3071.3 2595.7 3575.2 2464.5 3170.1 2933.3 3146.2 3851.0 3949.4 True False 2500.4487289143235 3168.4640494617934 3279.7368872272427 2756.030493737582 3324.090285770425 2444.4299291023694 3290.73989024528 2874.793030370667 3013.976155205218 3607.8472027842267 3463.6488373093307 0.7219117313453605 0.9147763524212097 0.9469022528782229 0.7957014764460221 0.9597076499108036 0.7057383828209554 0.9500789614693239 0.8299897493661323 0.8701737089336596 1.0416319240916219 1.0 11.758076954232088 -10.497596520549358 0.5978531127471983 1.013277275144654 0.8556386837829204 0.3573295839873555 0.08451138047996237 0.9482466833254979 0.5428048437423575 0.07801495645203702 0.016772355785287976 3.1798269035078234e-11 10.497596520549358 -0.15763859136173353 RPIENAAQIPVAT(ph)PQVSPNTVKR ddPTM_A549_PD325901_60min_R1 1 RPIENAAQIPVATPQVSPNTVKR 23 2 Q8IWI9-3 Q8IWI9-3 MGA MAX gene-associated protein 1 RPIENAAQIPVAT(0.847)PQVS(0.128)PNT(0.025)VKR 78.429 2.7553000000000002e-05 3644300.0 1503.1 1617.7 1729.6 1765.6 1557.2 1936.4 1856.5 2020.6 1617.1 1580.0 1856.1 True False 1655.6936054762632 1754.0292563186429 1846.9810569297165 1874.657102031466 1447.827644048363 1920.6306004113728 1927.15012341578 1980.2975478699636 1549.1389106167303 1480.2385303555136 1627.8114667873226 1.0171286044224577 1.077538334203055 1.1346406476512607 1.1516426442991718 0.8894320218211886 1.1798851645897073 1.1838902494152086 1.2165398685747766 0.951669737082107 0.9093427344365245 1.0 10.668717900923706 -8.789278503515202 24.999789794180824 0.9771773540054289 1.1056374252566865 0.3584639555127592 0.0894602430542106 188.96859528461633 169694.603292615 0.015234772273739934 0.01622033574961365 1.6245066611983767e-09 8.789278503515202 0.12846007125125758 RPIENAAQIPVATPQVS(ph)PNTVKR ddPTM_A549_MK2206_60min_R1 1 RPIENAAQIPVATPQVSPNTVKR 23 2 Q8IWI9-3 Q8IWI9-3 MGA MAX gene-associated protein 1 RPIENAAQIPVAT(0.015)PQVS(0.784)PNT(0.201)VKR 62.376999999999995 0.00017292 3497900.0 1097.4 1028.1 947.59 995.5 1335.4 999.93 1121.8 1067.9 1592.6 1555.4 1505.7 True False 1282.614291145944 1080.425898629852 1081.9725108040423 1239.3975446896927 1138.964428993684 1105.7419289001857 1325.6165391855998 1219.2780953065894 1231.878642859603 1204.0340597277852 1131.7931347940562 1.1332585891496254 0.9546142889676116 0.9559808038603456 1.0950742733699446 1.0063362234485833 0.9769823609165019 1.1712533840619312 1.0772976596367605 1.0884309199169675 1.0638287357582128 1.0 10.144394576154047 RPIENAAQIPVATPQVS(ph)PNTVKR ddPTM_A549_PD325901_60min_R1 1 RPIENAAQIPVATPQVSPNTVKR 23 2 Q8IWI9-3 Q8IWI9-3 MGA MAX gene-associated protein 1 RPIENAAQIPVAT(0.174)PQVS(0.65)PNT(0.176)VKR 55.158 0.0010949000000000002 4548800.0 1721.7 1518.4 1527.6 1693.3 2152.6 1924.8 1323.4 2368.1 1831.7 1982.9 2314.4 True False 1896.4857165514488 1646.3608968252631 1631.2721222050384 1797.8912952366784 2001.4088020668555 1909.125066965406 1373.7627111922666 2320.86638776149 1754.7200189083335 1857.6993555961687 2029.7434721903865 0.9343474889981377 0.8111177197424864 0.8036838864394327 0.8857726702263976 0.9860402703534975 0.9405745568947115 0.676815927733852 1.1434284280549698 0.8645033438707095 0.9152384924738508 1.0 10.987081689518511 -14.999999999994907 0.18996198095274625 1.477781286542668 0.8645317173064665 0.04613777938854047 0.1132192517763648 78.52735537069432 0.899287026289158 14.110723311942426 0.10513041282648779 1.0000000000117267e-15 14.999999999994907 -0.6132495692362016 RPILQLS(ph)PPGPR ddPTM_A549_MK2206_60min_R1 3 RPILQLSPPGPR 12 1 Q8N3X1-2;Q8N3X1;F5GXL1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 RPILQLS(1)PPGPR;RPILQLS(1)PPGPR;RPILQLS(1)PPGPR 171.21 4.5347e-16 232148700.0 5733.5 6870.2 5924.900000000001 5267.6 7593.799999999999 6225.4 6206.700000000001 3261.54 5502.4 8817.8 10207.9 True False 6701.17462938333 7219.863835003213 6765.139912053602 6558.162236471551 6476.762079446033 6884.167695913929 7334.3770491738915 3723.8732830473386 4256.115185527241 6825.852855771932 7672.99670629226 0.873345172152624 0.9409444720708072 0.8816815868702031 0.8547067707058331 0.8440981180318698 0.8971941419274363 0.9558686560049371 0.4853218925525626 0.5546874771934939 0.8895941334334699 1.0 12.905574420272055 RPILQLS(ph)PPGPR ddPTM_A549_PD325901_60min_R1 7 RPILQLSPPGPR 12 1 Q8N3X1-2;Q8N3X1;F5GXL1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 RPILQLS(1)PPGPR;RPILQLS(1)PPGPR;RPILQLS(1)PPGPR;RPILQLS(1)PPGPR;RPILQLS(1)PPGPR;RPILQLS(1)PPGPR;RPILQLS(1)PPGPR 178.23 1.244e-16 389136100.0 13559.609999999999 13943.05 13639.49 13901.51 17340.940000000002 16291.820000000002 14879.720000000001 11075.3 9954.27 16797.09 17986.48 True False 14936.171625142702 15118.079756638237 14565.147812316322 14760.174700080106 16122.972197395335 16159.144819455703 15445.97588709521 10854.39445309523 9535.926648806382 15736.518870790678 15774.256985690869 0.946870057885553 0.9584020198448737 0.9233492154672418 0.9357128334773133 1.0221066014089153 1.0243997440965982 0.9791888075049463 0.6881081285122628 0.6045246161170447 0.9976076137890727 1.0 13.945284431140504 -8.236608572779236 23.851049666259357 0.7986441867134891 0.9705407286554323 0.2750561647153251 0.11274006356835772 490.396091695963 471046.5207075799 0.02387542736838254 0.030814276718773386 5.7995116772944874e-09 8.236608572779236 0.17189654194194315 RPIS(ph)DDDCPSASK ddPTM_A549_MK2206_60min_R1 2 RPISDDDCPSASK 13 1 Q96PU4 Q96PU4 UHRF2 E3 ubiquitin-protein ligase UHRF2 1 RPIS(0.995)DDDCPS(0.005)ASK;RPIS(0.996)DDDCPS(0.004)ASK 136.6 1.3456e-08 21444500.0 7144.5 7162.0 6879.4 6428.0 9028.0 7289.0 6583.7 6699.2 10034.099999999999 9926.6 10252.7 True False 8350.3169337454 7526.515208624648 7855.002364762537 8002.8602885638875 7699.993159319283 8060.31714195339 7779.8730692068475 7648.8321154395535 7761.392371165103 7684.174165676889 7706.671629875154 1.0835179354697213 0.9766233167957845 1.0192470552803072 1.0384327596806575 0.9991334170084551 1.0458882289349551 1.0094984505435427 0.9924948775277534 1.0071004376361155 0.9970807807470279 1.0 12.911892205783749 -7.986750866526712 24.26363708935888 1.0025544232298662 1.024056310326162 0.19954458025362176 0.025710830399908062 232.00911431082935 424884.68860662315 0.003589032650626559 0.00495715784825712 1.0309773720622468e-08 7.986750866526712 0.021501887096295746 RPKEEEWDPEYT(ph)PK ddPTM_A549_MK2206_60min_R1 4 RPKEEEWDPEYTPK 14 2 Q9NYF8-2;Q9NYF8;H0YF14;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RPKEEEWDPEYT(1)PK;RPKEEEWDPEYT(1)PK;RPKEEEWDPEYT(1)PK;RPKEEEWDPEY(0.001)T(0.999)PK 124.29 3.3556999999999993e-07 125156300.0 16747.2 16029.0 12925.1 12425.2 21481.2 15716.400000000001 14508.4 14750.0 24354.6 22467.9 24930.800000000003 True False 19573.717930270966 16844.80763460549 14758.073533272121 15469.37455778843 18321.343935973575 17379.499016298014 17144.388480228536 16840.857669980505 18838.32198630448 17392.38578536577 18739.794304923736 1.0445001482822105 0.8988790037134852 0.7875259084030902 0.8254826230255884 0.9776704929551859 0.9274114076978788 0.9148653502415435 0.8986682242054119 1.0052576714438566 0.9280990763487758 1.0 14.193817497066554 -8.762793428190376 24.976861132676387 1.0024827954725655 0.905228136742409 0.1389729663297219 0.06813947650654814 31.39299780323556 579074.7305187335 0.011250956173212062 0.012299114449933013 1.7266589806097538e-09 8.762793428190376 -0.09725465873015648 RPKEEEWDPEYT(ph)PK ddPTM_A549_PD325901_60min_R1 4 RPKEEEWDPEYTPK 14 2 Q9NYF8-2;Q9NYF8;H0YF14;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RPKEEEWDPEYT(1)PK;RPKEEEWDPEY(0.001)T(0.999)PK;RPKEEEWDPEYT(1)PK;RPKEEEWDPEYT(1)PK 131.45 3.0143000000000002e-09 187714000.0 23178.199999999997 22657.9 21090.9 21584.699999999997 21643.8 24485.3 19313.2 18430.7 26762.800000000003 27043.199999999997 30965.4 True False 25531.233801110986 24567.36075090698 22522.255303884675 22917.937896589585 20123.614155056483 24285.89983487533 20048.174394588565 18063.085229895547 25638.052586143993 25335.68773677862 27156.852105843493 0.9401396635222419 0.9046468513786502 0.8293396898913197 0.8439099571359452 0.7410142411434487 0.8942825825401758 0.7382363138574034 0.6651391390833848 0.9440730643676963 0.9329390475020113 1.0 14.729028638421841 -8.970526098637341 20.34247069406955 0.9753272623894781 0.8197110624210874 0.38829703641510194 0.07809414687286172 15.705781223510895 10840.27692258497 0.013922687173493223 0.014611341521003504 1.070222066697314e-09 8.970526098637341 -0.1556161999683907 RPKS(ph)ESQGNATK ddPTM_A549_MK2206_60min_R1 2 RPKSESQGNATK 12 2 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 RPKS(0.932)ES(0.067)QGNAT(0.001)K;RPKS(0.895)ES(0.105)QGNATK 55.173 0.0062503 35776000.0 2126.36 2051.5699999999997 1091.17 1322.2199999999998 1829.57 1168.1100000000001 1670.52 1448.8 2151.12 4653.5 4906.0 True False 2485.237583489238 2155.9861500360325 1245.9143138003215 1646.1639593567106 1560.442676616724 1291.7186248713367 1974.031860438875 1654.1718367639173 1663.8947546327693 3602.271118003886 3687.7048012881974 0.673925305144026 0.5846417395673587 0.3378563038356801 0.4463925525659399 0.4231473940299198 0.3502771220787821 0.5353009437602765 0.4485640597333274 0.4512006367894561 0.9768328302052628 1.0 11.848507458118346 -10.638388286485545 0.7168636188130939 1.0358071064537284 0.4624545381078082 0.8145996652345886 0.09454498372200233 0.2678424358723784 0.2218470871350632 0.09054153359379111 0.01926887312432391 2.2993851037369616e-11 10.638388286485545 -0.5733525683459202 RPKS(ph)ESQGNATK ddPTM_A549_PD325901_60min_R1 2 RPKSESQGNATK 12 2 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 RPKS(0.999)ES(0.001)QGNATK;RPKS(0.995)ES(0.005)QGNATK 60.474 0.0028543 60126000.0 3886.3999999999996 4442.799999999999 3032.3 2914.8 3078.0 2187.43 2350.74 3061.2 3116.9 3948.4 5809.2 True False 4280.944466983535 4817.210348007954 3238.090112701191 3094.8405760089 2861.811898523542 2169.616295320105 2440.1986970742873 3000.1419645350556 2985.9075323117227 3699.0973501618423 5094.705227552881 0.8402732397218167 0.9455326918534568 0.6355794826340777 0.6074621470289522 0.5617227632810748 0.4258570807171562 0.47896759244820486 0.5888744943102628 0.586080528499179 0.7260670019055478 1.0 12.314782961170923 -10.660020737266168 0.9142685680420019 1.0013166235068485 0.6250694656785929 0.17248448772254477 0.1607360787536888 0.43989029001342944 0.651037011084332 0.10892994363702783 0.028622704722970273 2.187657162313809e-11 10.660020737266168 -0.3762471578282556 RPKS(ph)NIAVEGR ddPTM_A549_PD325901_60min_R1 4 RPKSNIAVEGR 11 2 Q8TEH3;A0A0A0MS48;Q8TEH3-5;Q8TEH3-2;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 RPKS(1)NIAVEGR;RPKS(1)NIAVEGR;RPKS(1)NIAVEGR;RPKS(1)NIAVEGR 117.0 3.7413e-06 52340400.0 11125.7 11799.2 12824.300000000001 11976.8 14496.7 12391.8 12909.1 13089.4 13352.1 12593.7 13256.0 True False 12255.172873692543 12793.559993295996 13694.63411678063 12716.57973471366 13478.50180290001 12290.885289288193 13400.362864630562 12828.32164856434 12790.957670178499 11798.531632745711 11625.596036707471 1.054154370666003 1.1004648667389365 1.1779726453198816 1.0938432485148666 1.159381571520466 1.0572262489149022 1.152660287035548 1.103454963346335 1.1002410224638317 1.0148754176123271 1.0 13.505017063697727 -10.417992700188503 0.5751214728216695 0.990035661230332 1.1160897392002307 0.5318605650733412 0.037440724054355036 0.5514854694129069 0.2995842940542994 0.0350751200706238 0.008015264252336922 3.8195069078026666e-11 10.417992700188503 0.12605407796989865 RPKSES(ph)QGNATK ddPTM_A549_MK2206_60min_R1 1 RPKSESQGNATK 12 2 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 RPKS(0.16)ES(0.84)QGNATK 175.66 1.2044e-16 14286000.0 2046.5 1978.5 1604.8 927.62 1579.3 1315.3 1442.4 1773.2 2616.2 5745.6 5796.6 True False 2391.899167878783 2079.1971991432383 1832.3847711967485 1154.8869416424436 1346.98706208606 1454.4841729745215 1704.465409271982 2024.5565301972504 2023.6348772129193 4447.664969507497 4357.144241978634 0.548960290282378 0.47719264813667234 0.4205471908739563 0.26505593515031184 0.30914447337056167 0.33381593360196443 0.39118865812391895 0.464652170724987 0.46444064387778017 1.020775242338031 1.0 12.089167158700738 -10.43741180964986 0.5667949683929293 1.057457585023324 0.38488510286586775 0.8998121191226303 0.07756458769102383 0.2610821272693457 0.1357767087431245 0.08826322025209003 0.019508360238386598 3.652482891554798e-11 10.43741180964986 -0.6725724821574564 RPKSES(ph)QGNATK ddPTM_A549_PD325901_60min_R1 2 RPKSESQGNATK 12 2 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 RPKS(0.389)ES(0.611)QGNATK;RPKS(0.006)ES(0.994)QGNATK 190.41 2.6268e-20 55884000.0 5769.3 5705.7 4321.7 5034.700000000001 5018.5 3527.0 3189.5 3550.1 4027.1 7046.6 7879.2 True False 6354.99508886582 6186.539363155889 4614.996550493264 5345.6819843666835 4666.017872885119 3498.277281373124 3310.878167861369 3479.290470500426 3857.854991617485 6601.676473419719 6910.108350364021 0.9196664895321132 0.895288329716275 0.6678616769084595 0.7736032075510184 0.6752452546766963 0.50625505476898 0.4791354925262429 0.5035073683493166 0.5582915340848824 0.9553651171145451 1.0 12.754492616883049 -3.574466492498458 16.906963497421465 0.7325269508254147 49.24585919392228 0.0 0.18831196425924038 0.0 0.0 0.02916534042351195 0.0 0.00026639956264198916 3.574466492498458 48.51333224309686 RPKT(ph)PLGK ddPTM_A549_MK2206_60min_R1 4 RPKTPLGK 8 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RPKT(1)PLGK;RPKT(1)PLGK;RPKT(1)PLGK;RPKT(1)PLGK 61.65 0.0037077 85939000.0 15403.5 16427.1 15995.2 13949.7 21062.4 16167.7 17613.7 15555.5 22698.3 23005.0 22403.6 True False 18003.234220581886 17263.169224182897 18263.559878019834 17367.377126225827 17964.148861192578 17878.555282749312 20813.881294574254 17760.5397617208 17557.171291736875 17808.154522333618 16840.167812095453 1.0690650129775465 1.0251185983897158 1.0845236271874934 1.031306654423699 1.0667440527694638 1.0616613493547278 1.235966382687985 1.0546533716228343 1.0425769794958002 1.0574808232933943 1.0 14.039618894466326 -9.180855862276129 1.5889887193138468 1.0135831791012961 1.0786425912020632 0.10507211557313534 0.05504340277386469 0.39121073751134916 2.039098200510648 0.011718852981970116 0.01073273596161054 6.593927043641869e-10 9.180855862276129 0.06505941210076704 RPKT(ph)PLGK ddPTM_A549_PD325901_60min_R1 3 RPKTPLGK 8 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RPKT(1)PLGK;RPKT(1)PLGK;RPKT(1)PLGK 61.65 0.0037077 87971000.0 13130.8 12393.0 13042.400000000001 12004.599999999999 15988.9 15075.900000000001 13859.7 13783.500000000002 14740.8 13681.3 15192.699999999999 True False 14463.829149615949 13437.401603237291 13927.535694322467 12746.096877575294 14865.894822710543 14953.126868798723 14387.138467818855 13508.577279553429 14121.295438512838 12817.460383134738 13324.094214460296 1.0855393932833894 1.0085039468314496 1.0452894936158041 0.95662014035763 1.11571522862522 1.1222621686786394 1.0797836037668411 1.0138458241231076 1.0598315511149239 0.9619761146107987 1.0 13.701749839984325 -4.439862759099826 16.281537542019603 1.0397304077008587 1.0518111290685601 0.0 0.05468880649258772 0.0 0.0 0.00668799942353436 0.0 3.631928087796587e-05 4.439862759099826 0.012080721367701441 RPLAPSGRS(ph)PVEGLGR ddPTM_A549_MK2206_60min_R1 3 RPLAPSGRSPVEGLGR 16 2 Q9Y5U2-2;Q9Y5U2;A6NCC9;E9PME3;C9JHT9;C9JJV1 Q9Y5U2-2 TSSC4 Protein TSSC4 1 RPLAPS(0.016)GRS(0.984)PVEGLGR;RPLAPS(0.057)GRS(0.943)PVEGLGR;RPLAPS(0.017)GRS(0.983)PVEGLGR 127.5 1.2198e-10 81697000.0 4955.28 5428.95 4200.91 4046.11 6589.1 5134.54 4390.16 5407.73 7701.7 7257.6 7496.2 True False 5791.610119035607 5705.260366079691 4796.662206610251 5037.407131636783 5619.852118527988 5677.87361476819 5187.79524484851 6174.292287978558 5957.277247087661 5618.103119377891 5634.68665540493 1.0278495457205508 1.0125248687266515 0.8512739926734301 0.8939995140288374 0.9973672827285414 1.0076644828726784 0.9206892170077017 1.0957649760445907 1.0572508484341883 0.997056884075154 1.0 12.46011966910347 -8.24889810824257 24.844236073515468 1.0329452560855252 0.9575744950608207 0.30556748607542006 0.05693947919249064 740.9796941009191 1467879.7689943514 0.009606754613797147 0.012360290660710278 5.637699088735613e-09 8.24889810824257 -0.07537076102470452 RPLAPSGRS(ph)PVEGLGR ddPTM_A549_PD325901_60min_R1 6 RPLAPSGRSPVEGLGR 16 2 Q9Y5U2-2;Q9Y5U2;A6NCC9;E9PME3;C9JHT9;C9JJV1 Q9Y5U2-2 TSSC4 Protein TSSC4 1 RPLAPSGRS(1)PVEGLGR;RPLAPS(0.228)GRS(0.772)PVEGLGR;RPLAPS(0.001)GRS(0.999)PVEGLGR;RPLAPS(0.005)GRS(0.995)PVEGLGR;RPLAPS(0.079)GRS(0.921)PVEGLGR;RPLAPS(0.022)GRS(0.978)PVEGLGR 152.06 1.0379000000000002e-15 133808000.0 8709.119999999999 9079.769999999999 8978.81 9280.83 10840.109999999999 10059.640000000001 9290.17 9353.29 10180.45 9968.57 11011.609999999999 True False 9593.263451084718 9844.95408335558 9588.166040570717 9854.085790805782 10078.73806994933 9977.717627103018 9643.712503126088 9166.731293435945 9752.60108996852 9339.152788953199 9657.251778347032 0.9933740645132827 1.019436409997035 0.9928462320997765 1.0203819903401588 1.0436445379364896 1.0331839591750644 0.9985980198578542 0.9492070315479497 1.009873338068629 0.9670611270478566 1.0 13.237396975809432 -7.802134010211956 24.909916722264605 0.999325951799841 1.0174959497253284 0.23622163158740972 0.022955664559102123 223.24586824836558 136652.077061321 0.003425238872483341 0.004732672655619584 1.5771245414205237e-08 7.802134010211956 0.018169997925487458 RPLDS(ph)PEAEELPAMK ddPTM_A549_MK2206_60min_R1 4 RPLDSPEAEELPAMK 15 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK 117.74 3.4334000000000006e-07 89890000.0 10733.800000000001 11172.3 11182.2 10158.900000000001 14373.2 11152.4 10308.300000000001 10755.3 15336.3 16793.0 18873.5 True False 12545.403023785626 11740.922349248416 12768.00410548124 12647.830956050357 12258.921320062907 12332.539565636018 12181.184677203539 12279.89671172484 11862.65253703864 12999.449636754976 14186.689067899064 0.884308027316447 0.8276013023937483 0.8999988682610973 0.8915280299382357 0.8641143300871932 0.8693035779251324 0.8586347821470564 0.8655928563001483 0.8361818941870561 0.916313142167152 1.0 13.792250307730463 -10.806636984005268 0.9625455740698002 1.003117034391131 0.8650545544667196 0.5057497897320801 0.031343109691169505 0.1715396697781399 0.27165152090898154 0.01684603053664752 0.003833648544063189 1.560856639086878e-11 10.806636984005268 -0.13806247992441145 RPLDS(ph)PEAEELPAMK ddPTM_A549_PD325901_60min_R1 8 RPLDSPEAEELPAMK 15 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK 159.06 5.8725e-20 186213000.0 32982.5 30517.8 29999.2 39018.7 36734.299999999996 48757.299999999996 34330.700000000004 35636.7 39515.7 35899.2 42739.6 True False 36330.85911956681 33089.6421082284 32035.12611184434 41428.79648110283 34154.209494455295 48360.23671423127 35637.1735749799 34925.89806204965 37854.99254854833 33632.51838540422 37482.900148646855 0.9692648908032365 0.8827930063309934 0.854659751107888 1.1052719057705684 0.9111944208961716 1.290194636019302 0.9507581706232091 0.9317821706309587 1.0099269906657666 0.8972763113853762 1.0 15.193944961900922 -6.246976079483195 24.81931069859887 1.0148253432811378 0.900294595001613 0.17126502855327896 0.10743128196976051 859.4421678535163 1474816.3595020075 0.013034949408859414 0.03431851382519732 5.662704778053588e-07 6.246976079483195 -0.11453074827952481 RPLEAGS(ph)PGQDLEPACDGAR ddPTM_A549_MK2206_60min_R1 1 RPLEAGSPGQDLEPACDGAR 20 1 Q9HCM7;A0A3B3IRR3;A0A1B0GUN3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 RPLEAGS(1)PGQDLEPACDGAR 123.85 4.6133e-15 5484600.0 2125.4 2759.8 2243.7 1926.0 2583.0 2249.0 1823.2 2112.4 3690.8 2824.6 3386.9 True False 2484.115558958985 2900.2620319411194 2561.89039826405 2397.8700864614243 2203.044121679409 2486.9876872346226 2154.4518401169435 2411.839168953684 2854.8396929964997 2186.5208982301037 2545.839256315329 0.9757550689018447 1.1392164783171572 1.0063048528727427 0.9418780390447491 0.8653508332132257 0.9768832345032326 0.8462638930452929 0.9473650635918045 1.121374684562134 0.8588605477765797 1.0 11.313925615355497 -8.741528113106511 24.92279082772938 1.0573158279994248 0.9624316430473745 0.0 0.09719069118026809 278.3567501236085 348417.02855059534 0.01475502598577588 0.01671981712685847 1.8133092914476165e-09 8.741528113106511 -0.09488418495205031 RPLEEDFRRS(ph)PTEDFR ddPTM_A549_MK2206_60min_R1 4 RPLEEDFRRSPTEDFR 16 3 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPLEEDFRRS(0.995)PT(0.005)EDFR;RPLEEDFRRS(1)PTEDFR;RPLEEDFRRS(0.998)PT(0.002)EDFR;RPLEEDFRRS(1)PTEDFR 141.06 9.929899999999999e-15 1148388000.0 5750.45 5516.46 5655.21 4943.35 7214.27 5893.6 5946.08 5590.52 8635.900000000001 8565.4 9004.35 True False 6720.985374995622 5797.224251294267 6457.203814755464 6154.470971915411 6153.060439685678 6517.25684014494 7026.405768693808 6382.993330249452 6679.88243869851 6630.470191071343 6768.321387582429 0.9930062404138118 0.8565231937611892 0.95403327427717 0.9093053682714852 0.9090969661952598 0.9629059358945177 1.0381312243217167 0.943068888832625 0.9869333999053037 0.9796328825690818 1.0 12.724582359807725 -7.473401963352599 5.067755043654686 0.9924429821098579 0.9221435924670773 0.4048373216267154 0.037532538068844906 0.13393757352265845 7.733502502028762 0.00503358399649383 0.008003765589030584 3.362002535614003e-08 7.473401963352599 -0.0702993896427806 RPLEEDFRRS(ph)PTEDFR ddPTM_A549_PD325901_60min_R1 6 RPLEEDFRRSPTEDFR 16 3 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPLEEDFRRS(0.953)PT(0.047)EDFR;RPLEEDFRRS(0.999)PT(0.001)EDFR;RPLEEDFRRS(0.986)PT(0.014)EDFR;RPLEEDFRRS(0.999)PT(0.001)EDFR;RPLEEDFRRS(0.983)PT(0.017)EDFR;RPLEEDFRRS(0.959)PT(0.041)EDFR 169.62 1.8444999999999998e-28 1474318400.0 10135.22 10378.74 11148.039999999999 9955.880000000001 12470.29 11649.470000000001 10929.199999999999 11317.83 11019.380000000001 12861.71 13441.199999999999 True False 11164.14007324538 11253.392843991192 11904.613033010382 10570.83209615599 11594.41985056503 11554.600578689477 11345.116686687723 11092.087001984126 10556.273779526187 12049.619435606834 11788.017610786994 0.9470752794795018 0.9546467621233806 1.009891011879444 0.8967438330328603 0.9835767330339915 0.9801987883116223 0.962427870510307 0.9409628801227753 0.8955088232873303 1.022192181370721 1.0 13.525033500449423 -8.233766314346887 19.538529627753743 0.9485511950016707 0.9626437935868635 0.0 0.04108627114437039 202.87365838922295 143235.94328600646 0.007098886178313492 0.009160491459397641 5.837591295359555e-09 8.233766314346887 0.01409259858519274 RPLEQQQPHHIPTSAPVYQQPQQQPVAQS(ph)YGGYKEPAAPVSIQR ddPTM_A549_PD325901_60min_R1 1 RPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYKEPAAPVSIQR 44 2 C9J9W2;Q14847;Q14847-2;Q14847-3;J3KSN1 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 RPLEQQQPHHIPTSAPVY(0.005)QQPQQQPVAQS(0.738)Y(0.198)GGY(0.053)KEPAAPVS(0.006)IQR 55.833999999999996 0.00105 7010800.0 558.28 626.18 1057.1 773.96 1295.6 995.94 931.29 1037.9 845.88 987.69 602.7 True False 614.9561746159858 678.9503861789012 1128.8411628586969 821.7657514093073 1204.6015255773561 987.8293948428543 966.7307505714417 1017.1982702832008 810.3306052269371 925.3270848397706 528.5717208300839 1.1634299573390747 1.284500020380694 2.1356442624019554 1.5546911025031442 2.2789745991057107 1.868865389339292 1.8289490573829046 1.924428095937036 1.533057054120056 1.7506178412015891 1.0 9.04595543104336 -9.825340505366475 0.820667043470315 1.05829790329546 1.7634804726779951 0.013480212556700288 0.37995146239634936 0.38567651852675927 0.5392470934169996 0.12838215388723148 0.06821479943217491 1.4950630033938475e-10 9.825340505366475 0.7051825693825351 RPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYKEPAAPVSIQR ddPTM_A549_MK2206_60min_R1 2 RPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYKEPAAPVSIQR 44 2 C9J9W2;Q14847;Q14847-2;Q14847-3;J3KSN1 C9J9W2 LASP1 LIM and SH3 domain protein 1 0 ; 116.93 1.6214e-22 56724000.0 1359.99 1402.41 1417.21 1685.06 1694.6799999999998 1713.1399999999999 1277.94 1169.9099999999999 2423.71 2309.39 1777.83 False True 1589.5230634368265 1473.7866788225758 1618.1916884270584 2097.8997756452186 1445.3948169290215 1894.4233377097019 1510.1251560767037 1335.7483251991116 1874.7435548695528 1787.697195058988 1336.3457453881374 1.189454951252271 1.1028483339051744 1.2109079510385687 1.5698779921927242 1.0816024385285197 1.4176146736333362 1.1300407557612215 0.9995529448938738 1.4028881083652789 1.3377505044847184 1.0 10.384077601324915 -11.076472407005864 1.3860431095884433 0.999578277262532 1.251715640832728 0.0 0.18898309572976757 0.49913416933376237 1.7071795146045845 0.11683533561484387 0.025545760622698775 8.385473542174389e-12 11.076472407005864 0.2521373635701959 RPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYKEPAAPVSIQR ddPTM_A549_PD325901_60min_R1 2 RPLEQQQPHHIPTSAPVYQQPQQQPVAQSYGGYKEPAAPVSIQR 44 2 C9J9W2;Q14847;Q14847-2;Q14847-3;J3KSN1 C9J9W2 LASP1 LIM and SH3 domain protein 1 0 ; 70.408 8.546900000000001e-06 15782600.0 1242.8000000000002 1459.32 1006.9300000000001 1257.4499999999998 1303.82 1452.8 1772.67 1278.42 1456.37 1228.0300000000002 1478.1999999999998 False True 1368.968141098996 1582.302017883986 1075.2663249619795 1335.119830623848 1212.2441811348167 1440.9688784743046 1840.1299268922453 1252.920910198911 1395.1638335630985 1150.4919762230886 1296.3907710818478 1.0559841767128455 1.2205440313058873 0.8294307156048802 1.0298745258034199 0.9350916468829764 1.1115235549477147 1.4194253522467173 0.9664685511092764 1.0761908096575108 0.8874577032533134 1.0 10.34028494001869 -4.9570700093614946 16.861859422847335 1.052679456425342 1.0734099085349051 0.0 0.15620182472873573 113999.36575598198 16421.94262976089 0.01904934856545807 77208.36035577494 1.1039006539995974e-05 4.9570700093614946 0.020730452109563036 RPLFLAPDFDR ddPTM_A549_MK2206_60min_R1 2 RPLFLAPDFDR 11 1 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 0 ; 96.745 0.00028391 6956500.0 958.16 1202.4099999999999 1404.27 1198.8200000000002 1948.69 1485.1399999999999 1424.77 1272.4099999999999 2316.2 1431.27 1440.74 False True 1119.8739832371034 1263.6075330916449 1603.416601849737 1492.5309538170754 1662.0402824140342 1642.2965290438544 1683.6322664784002 1452.7780140921964 1791.5843982113606 1107.9451129398142 1082.96449559885 1.0340818999960322 1.1668042103198446 1.480580950129017 1.3781901067696096 1.5347135470909148 1.516482336880037 1.5546513974563843 1.3414825878376093 1.654333457368483 1.023066884872482 1.0 10.08077023041248 -3.965281537324134 9.043675897155424 1.349586301154728 1.3334712027230977 0.0 0.22900380779600293 0.0 0.0 0.03495227266128017 0.0 0.00010832244713169114 3.965281537324134 -0.01611509843163028 RPLFLAPDFDR ddPTM_A549_PD325901_60min_R1 1 RPLFLAPDFDR 11 1 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 0 64.65 0.0061558 2555600.0 659.1 784.52 805.44 832.2 971.91 1120.9 1006.6 1144.6 1118.9 640.52 814.13 False True 726.0113467962248 850.6342536731793 860.1020019041805 883.6031039366708 903.6463945074781 1111.7717620332105 1044.906713832655 1121.77005507867 1071.876524079562 600.077457888173 713.9971711952817 1.0168266431375779 1.191369221042091 1.2046294251618799 1.2375442642965333 1.265616211048442 1.5571094772995053 1.4634605793793376 1.571112744327471 1.5012335725156516 0.8404479486712825 1.0 9.47977454818789 -5.345145151116129 1.0080216257665877 1.3070960675917875 0.9130531529284892 0.13664719195502717 0.21623034579280284 2.860715341252189 2.4426307086793866 0.03482959992915741 1.1729615199722778 4.517049490521453e-06 5.345145151116129 -0.3940429146632983 RPLGNS(ph)PGER ddPTM_A549_MK2206_60min_R1 2 RPLGNSPGER 10 1 C9J5S8;Q86U76;P17036 C9J5S8 ZNF3 Zinc finger protein 3 1 RPLGNS(1)PGER;RPLGNS(1)PGER 53.448 0.008850499999999999 6835900.0 1372.23 1658.23 1728.56 1204.8000000000002 1971.93 1281.0 1557.25 1749.72 2192.9 2110.1 2377.74 True False 1603.8288761975566 1742.626824127011 1973.6958001619228 1499.9760540855277 1681.8617091998753 1416.5545697410191 1840.1821676295024 1997.7481682927669 1696.2116513417207 1633.4269444719043 1787.2815357144323 0.897356596679916 0.9750152895919829 1.1043004477596055 0.8392500141204338 0.9410166644661176 0.7925749477262842 1.029598376561264 1.1177579627902352 0.949045585402801 0.913916980527062 1.0 10.803551192789138 RPLLPFETEVGPCGVGEASLDKADSEGSNSGGT(ph)WPK ddPTM_A549_PD325901_60min_R1 1 RPLLPFETEVGPCGVGEASLDKADSEGSNSGGTWPK 36 2 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 RPLLPFETEVGPCGVGEAS(0.059)LDKADS(0.042)EGS(0.05)NS(0.042)GGT(0.806)WPK 93.265 1.8539e-09 6298500.0 1619.9 1532.4 1684.2 1672.9 1928.1 1620.6 1483.9 2177.3 1892.1 1995.8 2183.3 True False 1784.3510554926477 1661.5407259582678 1798.4999399173375 1776.2312335684403 1792.6769075839002 1607.4023709082178 1540.3706265212377 2133.872043441193 1812.58161695499 1869.7848473946415 1914.7679410790147 0.9318889340120902 0.8677504413521527 0.9392782808468385 0.9276483042469857 0.9362371643707835 0.8394763336190026 0.8044685695192935 1.114428541266838 0.9466325281869716 0.9765072870088768 1.0 10.902953841020668 -8.244870947178464 24.999839549042367 0.984566784230879 0.8942551840690154 0.46859307271370154 0.05775501849078726 694.5807866232682 1048042.9903269925 0.009344207695430668 0.01204721097100254 5.690219935128154e-09 8.244870947178464 -0.09031160016186357 RPLPGPS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 RPLPGPSPPR 10 1 O14924-5;O14924-4;O14924;E9PBG5 O14924-5 RGS12 Regulator of G-protein signaling 12 1 RPLPGPS(1)PPR;RPLPGPS(1)PPR 64.22399999999999 0.0025748 10908400.0 1114.24 1050.8600000000001 1197.8400000000001 903.1800000000001 1494.09 941.6500000000001 825.51 870.16 1794.3400000000001 1330.8 1514.52 True False 1302.2964714474738 1104.3442854140324 1367.7117237850905 1124.4591405452911 1274.3113402090544 1041.2947779833185 975.4944814254816 993.507844753237 1387.9248549721842 1030.1713557192595 1138.4228853744398 1.143947902118231 0.970065078277833 1.2014091963156863 0.9877341320096917 1.1193655333008519 0.914681873810737 0.8568823536120593 0.8727054397070219 1.2191645765410632 0.904910968458285 1.0 10.152820853997122 -11.553137929240446 2.82681498119685 0.9983978828050601 1.0676796692514492 0.0 0.1281068044807471 1.0361095394184825 15.068462262047273 0.12404012562034251 0.020049119281514028 2.79809252163056e-12 11.553137929240446 0.06928178644638905 RPLPVES(ph)PDTQR ddPTM_A549_MK2206_60min_R1 4 RPLPVESPDTQR 12 1 P57682 P57682 KLF3 Krueppel-like factor 3 1 RPLPVES(0.955)PDT(0.045)QR;RPLPVES(1)PDTQR;RPLPVES(0.998)PDT(0.002)QR;RPLPVES(1)PDTQR 150.76 1.2283e-12 67121300.0 6471.2 6913.1 6316.4 6622.900000000001 8118.0 6605.200000000001 6485.3 5884.6 9269.7 9124.8 10113.6 True False 7563.380354349953 7264.947261762507 7212.160498994984 8245.510797313282 6923.852953849577 7304.157879823092 7663.595062917077 6718.760070831681 7170.127750669139 7063.501342551174 7602.1139988398545 0.9949048850759391 0.955648292418556 0.9487045971812076 1.0846339318999445 0.9107799429088033 0.9608061495707335 1.0080873641314252 0.8838015414997749 0.9431755103597972 0.9291496212276116 1.0 12.892184944211845 RPLPVES(ph)PDTQR ddPTM_A549_PD325901_60min_R1 2 RPLPVESPDTQR 12 1 P57682 P57682 KLF3 Krueppel-like factor 3 1 RPLPVES(0.938)PDT(0.062)QR;RPLPVES(0.981)PDT(0.019)QR 105.53 6.7427e-05 57414000.0 6211.3 7161.7 7286.3 6745.5 8404.2 7835.299999999999 7985.299999999999 7147.2 7473.0 9090.0 9413.9 True False 6841.866603482615 7765.241592988333 7780.792134081287 7162.154214857977 7813.917984916036 7771.491914585434 8289.184961223827 7004.643489130063 7158.935798057526 8516.055848690894 8256.049979628886 0.8287094458444837 0.9405516696420707 0.9424352024611942 0.8675037375657845 0.9464475147553887 0.9413087292059691 1.00401341824198 0.8484255190331256 0.8671139123093492 1.0314927682976183 1.0 13.01123598908901 -10.977771327544513 1.2714901492906228 0.999596285085952 0.908666418954844 0.38079885501779065 0.05094388044972621 0.4492809451925297 1.3014233444441496 0.03485938556154164 0.00818241577147245 1.0525159173500924e-11 10.977771327544513 -0.09092986613110798 RPLRAPS(ph)PEPAAPR ddPTM_A549_PD325901_60min_R1 2 RPLRAPSPEPAAPR 14 2 P20749 P20749 BCL3 B-cell lymphoma 3 protein 1 RPLRAPS(1)PEPAAPR;RPLRAPS(1)PEPAAPR 58.83 0.0030718000000000004 23340000.0 4070.0 4631.299999999999 5039.8 5025.3 5095.6 5797.9 5162.7 4636.5 5490.3 5435.4 5738.4 True False 4483.183403824358 5021.5959045487625 5381.831134779364 5335.7013677156365 4737.702634865681 5750.683824687618 5359.169373637839 4544.0213702361125 5259.561784032552 5092.207916388834 5032.613178714709 0.8908261463022534 0.9978108243620742 1.0693909791322056 1.0602248132804704 0.9414001169220906 1.1426834569781694 1.064887998208225 0.902914889118623 1.0450955790279524 1.011841708384459 1.0 12.297091997021697 -5.2972659149217804 3.6390503250415644 1.0246706427865049 0.8805865538682035 0.2844913604602204 0.06168641913215445 0.2291380832436013 5.4432343765070526 0.00797115325277385 0.08375186389196873 5.0435239220185875e-06 5.2972659149217804 -0.14408408891830138 RPLS(ph)GPDVGTPQPAGLASGAK ddPTM_A549_MK2206_60min_R1 2 RPLSGPDVGTPQPAGLASGAK 21 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RPLS(1)GPDVGTPQPAGLASGAK;RPLS(0.985)GPDVGT(0.015)PQPAGLASGAK 163.09 3.3293e-28 76001000.0 6542.799999999999 7481.200000000001 6890.1 6836.200000000001 8233.4 6484.6 6105.5 7149.9 9553.2 9334.400000000001 9888.2 True False 7647.064683898019 7861.9611252112145 7867.219785657233 8511.069306888683 7022.277766719029 7170.796067870895 7214.790319127909 8163.420220650413 7389.41545332561 7225.75255697765 7432.687039563389 1.0288425495643125 1.057754898512859 1.058462403136426 1.145086462215506 0.9447831893553711 0.9647649671917469 0.9706839909610564 1.0983134601520839 0.994178204193524 0.9721588597119387 1.0 12.859668147894949 -6.772233792453755 24.995019110903584 0.9973962908019831 1.0704754563929497 0.41406323890757035 0.04571758782744035 167.54236746890467 387953.3110071243 0.006392613221215481 0.012166130230094361 1.6895311665135011e-07 6.772233792453755 0.07307916559096661 RPLS(ph)GPDVGTPQPAGLASGAK ddPTM_A549_PD325901_60min_R1 2 RPLSGPDVGTPQPAGLASGAK 21 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RPLS(1)GPDVGTPQPAGLASGAK;RPLS(0.999)GPDVGT(0.001)PQPAGLASGAK 167.92 2.5474e-35 126924000.0 22725.1 22708.9 22772.1 23371.1 27358.0 26659.0 24934.0 25724.0 25338.0 27063.0 27620.0 True False 25032.13542266558 24622.658699891486 24317.55164576157 24814.679767380832 25436.4684599763 26441.897942763295 25882.877014408343 25210.91463991239 24273.13197526852 25354.237561399535 24222.915097605644 1.0334072229456777 1.0165027041821797 1.0039069016992626 1.0244299526869778 1.0500993937963565 1.0916067631090771 1.068528577593321 1.0407878051970882 1.0020731145471355 1.046704637292219 1.0 14.564084875621688 -8.76307337933533 7.174029501562967 1.0009312538245583 1.041478865844706 0.0767208744430723 0.026639490068976906 0.11223188866160709 32.3502408842082 0.004447361828973839 0.004871822140641496 1.725546315319246e-09 8.76307337933533 0.04054761202014778 RPLS(ph)IQDSFVEVSPVCPR ddPTM_A549_PD325901_60min_R1 2 RPLSIQDSFVEVSPVCPR 18 1 Q9NPR2 Q9NPR2 SEMA4B Semaphorin-4B 1 RPLS(0.998)IQDS(0.002)FVEVSPVCPR;RPLS(0.999)IQDS(0.001)FVEVSPVCPR 71.85300000000001 0.00026627 1702100.0 695.3 593.2 724.51 719.73 923.76 769.87 582.27 749.86 576.95 729.95 657.6 True False 765.8863441471937 643.1910458355813 773.679605432556 764.1860874745732 858.8782843989957 763.6004339695849 604.4286034803697 734.90345404621 552.7027978976704 683.8608324259535 576.7193688698574 1.3280052404829563 1.1152582704062501 1.3415183314350323 1.3250570879422288 1.4892482041691413 1.3240415966364034 1.048046304851546 1.2742825951663996 0.9583565729390189 1.185777467065223 1.0 9.171725665270595 -8.366796625177004 1.1931075749758933 0.9791587189273516 1.311977548716969 0.35684663341798983 0.12845566879723003 0.20833944037610821 0.5756631324737184 0.021748467902049533 0.027258668327695707 4.2973762055316516e-09 8.366796625177004 0.3328188297896173 RPLS(ph)PETR ddPTM_A549_MK2206_60min_R1 4 RPLSPETR 8 1 Q9P227 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 RPLS(0.995)PET(0.005)R;RPLS(0.988)PET(0.012)R;RPLS(0.996)PET(0.004)R;RPLS(0.993)PET(0.007)R 79.16 0.0033326000000000002 44877900.0 4760.23 5600.3 5401.610000000001 3838.5599999999995 6615.799999999999 5074.23 4752.58 4856.1 6900.0 7339.0 7242.2 True False 5563.640447550263 5885.33134918467 6167.639521400843 4779.007372319506 5642.624583897265 5611.181650598725 5616.062267608042 5544.467046182537 5337.161017035829 5681.114802843136 5443.761865448307 1.0220212759237006 1.0811147685461806 1.1329737916250535 0.8778869264381284 1.0365303853041672 1.0307544285162502 1.0316509807773426 1.0184991892046948 0.9804177972792902 1.0436009037980363 1.0 12.410388242934742 -6.226572794836449 24.99921208434261 0.9955521319647458 1.0789444135383928 0.3108345531619854 0.04983142305649615 472.0739902798906 338474.91096673155 0.0062194050826806565 0.016454336809912817 5.935088580915926e-07 6.226572794836449 0.08339228157364698 RPLS(ph)PETR ddPTM_A549_PD325901_60min_R1 1 RPLSPETR 8 1 Q9P227 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 RPLS(0.945)PET(0.055)R 72.922 0.0043624 11211000.0 3695.5 3611.0 3496.3 3916.2 4781.5 4655.5 3782.0 4351.1 4589.2 4273.3 4968.4 True False 4070.6644395166886 3915.311642805603 3733.579942959855 4158.094779664491 4445.663935279507 4617.587151526106 3925.92607958981 4264.313897128083 4396.331883372889 4003.48310871406 4357.318297282545 0.9342132389216025 0.898559934271361 0.8568526988924159 0.9542784107045151 1.0202752316836847 1.0597314303171008 0.9009959364314114 0.9786555872651157 1.0089535772758842 0.918795193642577 1.0 12.089224789041724 -6.505687502208216 4.929413086987156 0.9993918143300071 0.8971845391952696 0.3754807686434387 0.04653385923954747 0.10261103820252589 6.84120314008716 0.005551873822783366 0.012612693618705227 3.121134597298665e-07 6.505687502208216 -0.10220727513473749 RPLS(ph)WR ddPTM_A549_MK2206_60min_R1 1 RPLSWR 6 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 RPLS(1)WR 45.68 0.048748 7153800.0 448.93 304.43 208.44 279.24 615.37 539.82 394.55 500.09 381.48 510.73 602.29 True False 524.6984087152803 319.9241866743369 237.99992628879014 347.6538125355599 524.84988817571 596.9433940964844 466.2346278620778 570.9792889613932 295.07538909838087 395.35573828261 452.7247706416367 1.1589787940510454 0.7066637555990486 0.525705553843405 0.7679142717170918 1.1593133890859384 1.3185569529373218 1.0298412150086107 1.2612062029478903 0.6517765499779857 0.8732805534856887 1.0 8.822490434960384 -5.226911838675018 21.60098290108408 0.892220633986825 1.1589821302604337 0.0489212668241209 0.24535618225051553 5145.912985159676 3219011.7922344394 0.03712253081260278 6.486897512374575 5.930457000175391e-06 5.226911838675018 0.2667614962736087 RPLS(ph)WR ddPTM_A549_PD325901_60min_R1 2 RPLSWR 6 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 RPLS(1)WR;RPLS(1)WR 50.04 0.041007 41997000.0 1617.3899999999999 1334.24 1206.3 1380.35 1079.29 1302.83 952.96 1323.34 1498.42 1843.33 2425.7 True False 1781.5862421404133 1446.6810873156874 1288.1667720711825 1465.611084497697 1003.4843937483676 1292.2201844319093 989.225414279721 1296.9449455598533 1435.446618295914 1726.9418292153334 2127.3542777792168 0.8374657012936477 0.6800376892681474 0.6055252693575435 0.6889360647666427 0.471705349799998 0.6074306465686012 0.4650026676856058 0.6096516029825354 0.6747567310670992 0.8117791414686786 1.0 11.054844596396826 -10.233245347821239 0.7339905245221364 0.9943511810178877 0.6164299693425148 0.4644736593603517 0.11031608502496804 0.3049604136655455 0.31155075505304963 0.061011004984793914 0.020949783392669816 5.844598095057106e-11 10.233245347821239 -0.37792121167537285 RPLSIQDSFVEVS(ph)PVCPRPR ddPTM_A549_MK2206_60min_R1 2 RPLSIQDSFVEVSPVCPRPR 20 2 Q9NPR2 Q9NPR2 SEMA4B Semaphorin-4B 1 RPLSIQDSFVEVS(1)PVCPRPR;RPLSIQDS(0.001)FVEVS(0.999)PVCPRPR 127.28 2.4708e-17 11105900.0 1021.75 1090.79 1126.87 1228.16 1744.2 1113.89 1161.8600000000001 1367.1599999999999 2140.81 1609.62 1802.77 True False 1194.1964206108698 1146.3065518592118 1286.677110617198 1529.0592551341974 1487.6304905277682 1231.7611004596604 1372.9549226405616 1560.9591167519015 1655.9199531710824 1246.0057240703593 1355.0924550791528 0.8812656406836205 0.8459249754971548 0.9495124157724288 1.1283800226346055 1.0978073746568633 0.9089867601600007 1.0131817334636148 1.1519207496884216 1.2219977662515713 0.9194986802561589 1.0 10.40417557161675 -6.066024724257744 3.5210292558645233 1.0903350393693025 0.8665613764002219 0.34397948852296234 0.09535373670948936 0.16660539350637643 4.024527989450557 0.014541343764051542 0.044479688667054804 8.589646195090366e-07 6.066024724257744 -0.22377366296908063 RPLSIQDSFVEVS(ph)PVCPRPR ddPTM_A549_PD325901_60min_R1 2 RPLSIQDSFVEVSPVCPRPR 20 2 Q9NPR2 Q9NPR2 SEMA4B Semaphorin-4B 1 RPLSIQDSFVEVS(1)PVCPRPR;RPLSIQDSFVEVS(1)PVCPRPR 179.5 6.7207e-36 18352500.0 1384.82 1309.15 1124.2800000000002 1266.97 1279.53 1440.31 1236.9 1526.46 1166.42 1090.79 1546.8400000000001 True False 1525.4059069493967 1419.4766649623255 1200.5804016448556 1345.2278594023585 1189.6602269388661 1428.580592893259 1283.9709063576504 1496.0135578152954 1117.3994237348136 1021.9173332446136 1356.5884862266591 1.124442616487408 1.0463575943435797 0.8849996987548236 0.9916255910029871 0.8769499660489507 1.0530684930600034 0.9464704436118325 1.1027762457106252 0.8236834051591074 0.7532994298713747 1.0 10.40576743805179 -8.767522718056556 24.99940974099302 0.9167393978186685 0.9959847900098264 0.2501796211755918 0.0976840240738609 225.82135496392524 928007.54728675 0.016323263575886243 0.01759480404648161 1.707958373979046e-09 8.767522718056556 0.07924539219115789 RPLSS(ph)SHEASEGQAK ddPTM_A549_MK2206_60min_R1 2 RPLSSSHEASEGQAK 15 1 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RPLS(0.295)S(0.349)S(0.349)HEAS(0.007)EGQAK;RPLS(0.274)S(0.347)S(0.347)HEAS(0.032)EGQAK 79.545 0.00018564 5868800.0 1302.97 2062.82 1741.71 1501.28 1420.15 1327.54 1442.42 1005.46 1806.92 1892.5 2233.94 True False 1522.879481441982 2167.8087269833973 1988.7106678969892 1869.093667395019 1211.2478162613295 1468.0194016502678 1704.4890430130995 1147.9870340921095 1397.6555050583156 1464.9829356016674 1679.1910443925321 0.9069125794396445 1.2909839736357267 1.184326628311926 1.1130917316624842 0.7213281778188099 0.874242038481894 1.0150655869116543 0.6836548098119519 0.8323385893020496 0.872433747484428 1.0 10.71355066211886 -6.629653915838851 8.178673082517793 0.8931914556358842 1.1444178596234664 0.4823840800793623 0.12925090578208084 0.17419336155527435 12.144484249703273 0.018833888109593137 0.039283106413189536 2.3460976481987397e-07 6.629653915838851 0.2512264039875822 RPLWHES(ph)DFAVDNVGNR ddPTM_A549_MK2206_60min_R1 2 RPLWHESDFAVDNVGNR 17 1 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 RPLWHES(1)DFAVDNVGNR;RPLWHES(1)DFAVDNVGNR 78.987 0.00013843 7975600.0 1766.6799999999998 2247.6 1876.8899999999999 1823.5 3255.4 2079.37 1603.8 1725.56 3388.7 3188.1 3392.4 True False 2064.852392820956 2361.9932397242046 2143.061224583416 2270.2575818600267 2776.534972402304 2299.407553225903 1895.189700076542 1970.1634143058702 2621.164860641931 2467.905995768388 2549.9734545230517 0.8097544659370453 0.9262815012974294 0.8404249153190715 0.8903063590066497 1.088848578983199 0.901737839328208 0.7432193839959088 0.7726211466285129 1.0279184891092112 0.96781634780978 1.0 11.316266513225715 -8.788891306913301 24.996195478784585 1.0131837615111328 0.8770133548533635 0.28691685086396623 0.0880081101253141 186.69275811278197 169991.15893186236 0.015857136250998775 0.016883133130871576 1.6259556410117292e-09 8.788891306913301 -0.13617040665776925 RPLWHES(ph)DFAVDNVGNR ddPTM_A549_PD325901_60min_R1 2 RPLWHESDFAVDNVGNR 17 1 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 RPLWHES(1)DFAVDNVGNR;RPLWHES(1)DFAVDNVGNR 87.06200000000001 3.3681999999999998e-06 10118100.0 3242.5 3670.6000000000004 2771.7 3342.0 3083.2 2938.3 2792.7 3430.8999999999996 4585.4 3851.8999999999996 3967.2 True False 3571.67621299766 3979.9343439718186 2959.8042295860864 3548.427749767306 2866.6466684625675 2914.3714589902615 2898.977726724079 3362.4680080110165 4392.691584158035 3608.6903766306355 3479.259550152829 1.0265621640215865 1.1439026857875543 0.8506994626072306 1.0198801493873715 0.8239243514720389 0.8376412903320897 0.8332168626501978 0.9664320696808371 1.2625363301697576 1.037200681527804 1.0 11.764564591602383 -8.596549222193497 9.02455074196318 1.123805229716237 0.9315657020913664 0.2867479795814317 0.1130640462445074 0.2748403494822846 30.996626734380555 0.02250834693522068 0.02552294795798127 2.531924655009959e-09 8.596549222193497 -0.19223952762487073 RPMDSLDSRLS(ph)PPAGLFTSAR ddPTM_A549_PD325901_60min_R1 1 RPMDSLDSRLSPPAGLFTSAR 21 2 K7EK35;P42229-2;P42229 K7EK35 STAT5A Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A 1 RPMDS(0.135)LDS(0.104)RLS(0.761)PPAGLFTSAR 55.049 0.0028169000000000002 2281800.0 419.8 370.92 349.58 369.1 460.44 491.8 383.83 533.16 313.41 551.54 462.28 True False 462.41778695957413 402.17873014385344 373.304600995311 391.89846871307975 428.1002828317673 487.7949438557703 398.43686068983516 522.5257055440715 300.23846761263326 516.7156702735948 405.4224906343638 1.1405824729556318 0.9919990613114856 0.9207792108701272 0.9666421517461377 1.0559361967361989 1.2031768220172456 0.9827695056246184 1.2888424239278795 0.7405570103988328 1.2745116075457255 1.0 8.663282313672411 -8.78103267399209 24.999766204644235 0.8774852791380707 1.0591162878581581 0.0 0.16776224050243488 231.08519933690076 294848.4046275786 0.023405939698298902 0.024934665908069434 1.6556453968865418e-09 8.78103267399209 0.18163100872008742 RPMEEDGEEKS(ph)PSK ddPTM_A549_MK2206_60min_R1 17 RPMEEDGEEKSPSK 14 2 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.83)PS(0.17)K;RPMEEDGEEKS(0.941)PS(0.059)K;RPMEEDGEEKS(0.835)PS(0.165)K;RPMEEDGEEKS(0.988)PS(0.012)K;RPMEEDGEEKS(0.822)PS(0.178)K;RPMEEDGEEKS(0.982)PS(0.018)K;RPMEEDGEEKS(0.878)PS(0.122)K;RPMEEDGEEKS(0.998)PS(0.002)K;RPMEEDGEEKS(0.981)PS(0.019)K;RPMEEDGEEKS(0.866)PS(0.134)K;RPMEEDGEEKS(0.963)PS(0.037)K;RPMEEDGEEKS(0.846)PS(0.154)K;RPMEEDGEEKS(0.966)PS(0.034)K;RPMEEDGEEKS(0.973)PS(0.027)K;RPMEEDGEEKS(0.99)PS(0.01)K;RPMEEDGEEKS(0.913)PS(0.087)K;RPMEEDGEEKS(0.991)PS(0.009)K 158.98 2.1631999999999997e-19 4471017000.0 80560.90000000001 82207.79999999999 76324.8 68726.9 92111.6 77984.69999999998 72795.00000000001 77560.40000000001 95799.6 109252.0 109171.39999999998 True False 94157.61039509671 86391.8258820962 87148.80432741618 85564.99358526757 78562.10565949883 86236.98919194573 86020.90922625766 88554.82421876323 74101.14356052551 84571.8973211907 82061.12840264058 1.1474081849460271 1.0527740425187264 1.0619986103507186 1.0426982330225214 0.9573607771273451 1.0508871967835478 1.0482540381870944 1.0791324216779072 0.9029993250512147 1.0305963245622312 1.0 16.32441137206531 -8.752946241468205 24.99763446449488 0.954194124587482 1.051183784456898 0.27453933406423003 0.051873606654418 132.66644577215175 390473.5958248278 0.009027384665857346 0.010155450268746327 1.766256440725137e-09 8.752946241468205 0.0969896598694161 RPMEEDGEEKS(ph)PSK ddPTM_A549_PD325901_60min_R1 18 RPMEEDGEEKSPSK 14 2 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.968)PS(0.032)K;RPMEEDGEEKS(0.832)PS(0.168)K;RPMEEDGEEKS(1)PSK;RPMEEDGEEKS(0.804)PS(0.196)K;RPMEEDGEEKS(0.991)PS(0.009)K;RPMEEDGEEKS(0.972)PS(0.028)K;RPMEEDGEEKS(0.97)PS(0.03)K;RPMEEDGEEKS(0.849)PS(0.151)K;RPMEEDGEEKS(0.892)PS(0.108)K;RPMEEDGEEKS(0.895)PS(0.105)K;RPMEEDGEEKS(0.944)PS(0.056)K;RPMEEDGEEKS(0.885)PS(0.115)K;RPMEEDGEEKS(0.853)PS(0.147)K;RPMEEDGEEKS(0.558)PS(0.442)K;RPMEEDGEEKS(0.814)PS(0.186)K;RPMEEDGEEKS(0.883)PS(0.117)K;RPMEEDGEEKS(0.987)PS(0.013)K;RPMEEDGEEKS(0.891)PS(0.109)K 154.49 1.3890000000000001e-19 4711504100.0 124046.4 116902.59999999999 122750.3 118380.09999999999 145279.5 123151.90000000001 121108.5 124848.27999999998 130222.0 136209.4 141391.3 True False 136639.49920986657 126754.39237171036 131080.87351551812 125692.16991628632 135075.56910706652 122148.99175728238 125717.3502406142 122358.08311381924 124749.22219920343 127609.1152383583 124001.06645329791 1.1019219682383024 1.0222040503131433 1.0570947272045168 1.0136378138620712 1.0893097371702005 0.9850640421974671 1.0138408792472982 0.9867502483126025 1.006033462189515 1.0290969173754587 1.0 16.91999300279306 -7.276172470902605 24.993203802851564 1.0013783111713266 1.0525245281455824 0.49922081571755694 0.026411081428584338 451.0659777507329 765185.6617185639 0.0033097316925240275 0.005305208213226949 5.2945314097673853e-08 7.276172470902605 0.05114621697425581 RPMEEDGEEKS(ph)PSKK ddPTM_A549_MK2206_60min_R1 7 RPMEEDGEEKSPSKK 15 3 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.966)PS(0.034)KK;RPMEEDGEEKS(0.789)PS(0.211)KK;RPMEEDGEEKS(0.964)PS(0.036)KK;RPMEEDGEEKS(0.5)PS(0.5)KK;RPMEEDGEEKS(0.705)PS(0.295)KK;RPMEEDGEEKS(0.5)PS(0.5)KK;RPMEEDGEEKS(0.5)PS(0.5)KK 104.06 1.1833e-06 2431630000.0 48547.7 49830.6 49303.7 39914.0 55982.0 45365.100000000006 40906.399999999994 45141.5 58495.2 63622.9 60908.1 True False 56741.364882691785 52366.7646962987 56295.70603418067 49692.931791807576 47747.12195890697 50165.60477108379 48338.56337898183 51540.44586504579 45246.13059763978 49250.44270197689 45782.93779195717 1.239356136133748 1.14380525195345 1.2296219672489062 1.0854028637834003 1.042902099814461 1.0957270806657702 1.0558204805169495 1.1257566322906447 0.9882749508833027 1.0757379293958036 1.0 15.482522420029383 -4.799514569051183 0.2488269114423969 0.9809546641527357 1.4991350896603914 0.563113386289944 0.05169699304608752 4.447973193027102 0.1749658282324853 0.02570548971006219 0.7347361592174966 1.586665691009788e-05 4.799514569051183 0.5181804255076558 RPMEEDGEEKS(ph)PSKK ddPTM_A549_PD325901_60min_R1 10 RPMEEDGEEKSPSKK 15 3 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.832)PS(0.168)KK;RPMEEDGEEKS(0.818)PS(0.182)KK;RPMEEDGEEKS(0.744)PS(0.256)KK;RPMEEDGEEKS(0.5)PS(0.5)KK;RPMEEDGEEKS(0.88)PS(0.12)KK;RPMEEDGEEKS(0.5)PS(0.5)KK;RPMEEDGEEKS(0.713)PS(0.287)KK;RPMEEDGEEKS(0.87)PS(0.13)KK;RPMEEDGEEKS(0.603)PS(0.397)KK;RPMEEDGEEKS(0.829)PS(0.171)KK 149.82 1.1074e-14 3539376000.0 82979.5 80650.5 80685.4 77956.6 97471.1 80403.8 84348.1 85346.0 81389.4 89141.4 91866.3 True False 91403.51775372052 87447.20067795446 86161.19644472533 82771.80212971578 90625.06619304027 79749.018110595 87558.01310255118 83643.70707735834 77968.8865572625 83512.99679103348 80567.32748845655 1.13449856912303 1.0853928435256046 1.069430985619701 1.0273618935861448 1.124836444475892 0.9898431609515806 1.0867682450444474 1.038183959736564 0.9677482049833869 1.036561586370095 1.0 16.297907280005862 -8.57735530298356 4.132321784452708 0.9849205120971395 1.0709087389892864 0.34970206029733786 0.04171089169541847 0.12560289293835636 4.4850822674592425 0.006364371020754427 0.007295638580374665 2.6463342460754817e-09 8.57735530298356 0.08598822689214691 RPMEEDGEEKSPS(ph)K ddPTM_A549_PD325901_60min_R1 1 RPMEEDGEEKSPSK 14 2 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.486)PS(0.514)K 40.085 0.022598 5769100.0 1552.5 1802.9 1550.7 1559.3 1747.5 1709.5 1768.4 1925.0 1791.7 2141.2 2413.9 True False 1710.108657109906 1954.8367102780994 1655.9398271166233 1655.6144195727588 1624.7616285477238 1695.5783987829188 1835.697429705611 1886.6043648667132 1716.4010798045856 2006.0042665805208 2117.0056029728557 0.8077959995516522 0.9233970413365808 0.782208523582191 0.7820548123480744 0.767481024266593 0.8009324096270044 0.8671197785814969 0.891166448599571 0.8107683217249346 0.9475668197398918 1.0 11.047809372321456 -11.048442452696824 0.5109827874437991 1.0581304300578251 0.8198718334743095 0.5741179235419875 0.048621000262511704 0.9507399020353937 0.2741437207517565 0.11733940601226933 0.011208482964960076 8.944530458732103e-12 11.048442452696824 -0.23825859658351567 RPMEEDGEEKSPS(ph)KK ddPTM_A549_MK2206_60min_R1 2 RPMEEDGEEKSPSKK 15 3 Q12906-5;Q12906-2;Q12906-3;Q12906;Q12906-4;Q12906-6;Q12906-7 Q12906-5;Q12906-4 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.396)PS(0.604)KK;RPMEEDGEEKS(0.419)PS(0.581)KK 87.06200000000001 8.227000000000001e-06 936510000.0 17490.2 17998.9 19646.2 15559.0 20463.0 16911.1 16911.3 16576.3 22152.2 24039.7 23151.7 True False 20442.118165665022 18914.96713048229 22432.32657769538 19370.95569847005 17452.91980717218 18700.621377320334 19983.864306587133 18926.041287789696 17134.762069794364 18609.115073703244 17402.493935585808 1.1746660128904618 1.0869112898699924 1.2890294150210406 1.1131137738171537 1.0028976232816411 1.0745943338086748 1.1483333584574773 1.0875476444837848 0.984615316242463 1.0693361045022436 1.0 14.087006451754338 -7.564596135261189 0.4296963640555918 0.9856107687398762 1.1829147166466445 0.2945906416986551 0.07074179877076602 0.7792695776810821 0.28758802642739756 0.022690229756497853 0.05925332092546342 2.7252344153025107e-08 7.564596135261189 0.1973039479067683 RPMEFEAALLSPGS(ph)PK ddPTM_A549_MK2206_60min_R1 3 RPMEFEAALLSPGSPK 16 1 B4DQP0;Q9H9L7-2;Q9H9L7 B4DQP0 AKIRIN1 Akirin-1 1 RPMEFEAALLS(0.016)PGS(0.984)PK;RPMEFEAALLSPGS(1)PK;RPMEFEAALLS(0.049)PGS(0.951)PK 89.66799999999999 4.7025e-06 12557600.0 3294.8599999999997 3400.1 3517.0699999999997 3400.5 4345.68 3297.9399999999996 3426.8900000000003 3135.33 5141.7 5550.8 4778.299999999999 True False 3850.951816407078 3573.1505669986946 4015.8434117852353 4233.622652654247 3706.4362286874866 3646.9258218046043 4049.511554617352 3579.7726290454243 3977.1131596077007 4296.870424801974 3591.7162356289027 1.0721759637375092 0.9948309756639343 1.1180848230573173 1.1787185776698608 1.0319401605061644 1.0153713663757835 1.1274586545694332 0.9966746797909587 1.1073016070021788 1.1963279231744766 1.0 11.810457658788382 -10.990569067745076 1.202410535268582 0.9990671945942191 1.074076864503527 0.0 0.08066922711048016 0.6600428888729958 1.6623690694180404 0.041721703389492854 0.009057402528966104 1.021953022030774e-11 10.990569067745076 0.07500966990930791 RPMEFEAALLSPGS(ph)PK ddPTM_A549_PD325901_60min_R1 5 RPMEFEAALLSPGSPK 16 1 B4DQP0;Q9H9L7-2;Q9H9L7 B4DQP0 AKIRIN1 Akirin-1 1 RPMEFEAALLS(0.07)PGS(0.93)PK;RPMEFEAALLS(0.003)PGS(0.997)PK;RPMEFEAALLS(0.024)PGS(0.976)PK;RPMEFEAALLS(0.13)PGS(0.87)PK;RPMEFEAALLS(0.005)PGS(0.995)PK 88.396 5.2023e-06 36295000.0 5549.3099999999995 6036.8099999999995 6315.01 6709.52 7553.49 6777.97 6342.960000000001 6397.950000000001 6611.42 7340.570000000001 7914.4800000000005 True False 6112.671866013898 6545.55316488654 6743.5845538400345 7123.951811974485 7022.958920525862 6722.77245954879 6584.344813800897 6270.337868155321 6333.565009232371 6877.085157450488 6941.049134022371 0.880655322846213 0.9430207218679291 0.9715511911283785 1.026350869215951 1.0118007789488193 0.9685527835549136 0.9486094517796964 0.9033703330841617 0.9124794950935667 0.990784681776944 1.0 12.760938026148231 -5.305585860767953 2.9783735372729168 0.962814753335494 0.8712069197259481 0.31847350303834 0.03693468644219255 0.40100966971899826 5.377445744453307 0.006188934630466115 0.08229878229074004 4.947822819398029e-06 5.305585860767953 -0.09160783360954594 RPMEFEAALLSPGS(ph)PKR ddPTM_A549_MK2206_60min_R1 1 RPMEFEAALLSPGSPKR 17 2 B4DQP0;Q9H9L7-2;Q9H9L7 B4DQP0 AKIRIN1 Akirin-1 1 RPMEFEAALLS(0.021)PGS(0.979)PKR 77.847 7.7684e-05 4709200.0 938.51 811.14 815.82 874.14 1005.7 889.71 819.23 806.21 1203.6 1418.5 1085.7 True False 1096.90754363348 852.4235613409379 931.5155433934024 1088.3043392416353 857.762862242734 983.8585216583 968.0734867151185 920.4927364145752 930.9865217542498 1098.0598648089644 816.0907262043613 1.3440999982136763 1.0445205832757845 1.1414362563901221 1.3335580276758439 1.0510631167593214 1.2055749318880595 1.1862326768711478 1.127929416249818 1.1407880176316534 1.345511999524908 1.0 9.672585737767077 -11.086537737923024 0.2813290890043721 0.8901171847975977 1.1967860963461598 0.0 0.13727658254440514 4.175275499754301 0.3558188431401701 0.42440966434246935 0.04588041608806169 8.193364240294166e-12 11.086537737923024 0.30666891154856213 RPMEFEAALLSPGS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 RPMEFEAALLSPGSPKR 17 2 B4DQP0;Q9H9L7-2;Q9H9L7 B4DQP0 AKIRIN1 Akirin-1 1 RPMEFEAALLS(0.003)PGS(0.997)PKR;RPMEFEAALLS(0.037)PGS(0.963)PKR 94.463 7.2643e-07 8484400.0 2171.8 2334.07 2334.3 2356.1 2428.6 2707.9 2396.8 2382.4 2366.99 2514.4 2497.4 True False 2392.279537205343 2530.7702703193786 2492.7196352862147 2501.6309459086638 2258.0235142151646 2685.847760201385 2488.0115355792846 2334.8811630433543 2267.5136417294507 2355.6403548898106 2190.2356323229665 1.0922475654676882 1.155478539829635 1.1381056898624342 1.142174343705399 1.0309500406676801 1.2262825609100203 1.135956103928643 1.066041081875276 1.0352829660270493 1.075519145121119 1.0 11.096870372432354 -8.556433378714884 2.1110971855621647 1.0152496473951413 1.1327239416454618 0.4196781335307147 0.048353082248721445 0.1580664676809715 1.3938449561494035 0.007798461940638411 0.009048100736766132 2.77694079942363e-09 8.556433378714884 0.11747429425032041 RPMS(ph)DPSWNR ddPTM_A549_PD325901_60min_R1 1 RPMSDPSWNR 10 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 RPMS(0.999)DPS(0.001)WNR 80.96 0.00048186 6705600.0 1359.5 1604.1 1321.2 1123.5 1372.6 1391.9 1337.0 1461.0 1151.7 1571.7 1824.2 True False 1497.5154391889964 1739.2831365894397 1410.864577021012 1192.8960433463708 1276.1933112129352 1380.5648278829738 1387.8802666344732 1431.8592088676717 1103.2980541446348 1472.4625937719993 1599.8349645565609 0.9360436997350379 1.0871640982490534 0.8818813241852561 0.7456369374181139 0.7977031003111424 0.862942027439459 0.867514648311967 0.8950043226893416 0.6896324174602877 0.9203840561017702 1.0 10.643707372214651 -5.907391399557862 6.424705136871367 0.8443854227617023 1.0095477184998485 0.3471147618996212 0.08573005269946447 0.2194808541982691 12.646607109239742 0.015777387335916708 0.05006053108072583 1.2376806478420228e-06 5.907391399557862 0.16516229573814623 RPMS(ph)SPEMK ddPTM_A549_MK2206_60min_R1 3 RPMSSPEMK 9 1 P51610;A6NEM2;P51610-2;P51610-4;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.5)S(0.5)PEMK;RPMS(0.606)S(0.394)PEMK;RPMS(0.6)S(0.4)PEMK 60.434 0.0033828000000000005 219713000.0 11855.599999999999 13312.199999999999 11515.6 10217.300000000001 14877.5 11057.9 10686.5 12195.2 15582.599999999999 18250.3 16669.0 True False 13856.535438408842 13989.734118996517 13148.685238779459 12720.538958672023 12689.039458105086 12228.03963836004 12628.098721703436 13923.906946233654 12053.165980298918 14127.544554616165 12529.62725900387 1.1059016483073307 1.1165323460794419 1.049407533598474 1.0152368219518233 1.0127228205441356 0.9759300405024334 1.0078590895534265 1.111278624527944 0.9619732280253936 1.1275311118663982 1.0 13.613055876445033 -6.024086465236019 1.4067627782457852 0.9946606023292465 1.120390846049225 0.09370373921122666 0.05523926256551123 0.282118574586208 0.9712310147455584 0.005995681188140145 0.03327020859910136 9.460487903897485e-07 6.024086465236019 0.12573024371997843 RPMS(ph)SPEMK ddPTM_A549_PD325901_60min_R1 1 RPMSSPEMK 9 1 P51610;A6NEM2;P51610-2;P51610-4;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.5)S(0.5)PEMK 63.408 0.0017844000000000002 41973000.0 4768.5 5254.7 4574.7 5243.4 6674.8 5210.6 5462.6 6019.4 4924.9 5665.3 6197.4 True False 5252.594609615837 5697.532010371254 4885.166651905858 5567.272909374593 6205.985074809921 5168.166601168923 5670.482232249415 5899.338344872052 4717.923579801088 5307.591991153856 5435.159088555435 0.9664104626994239 1.0482732736136988 0.8988084014306645 1.0243072592111138 1.141822157124633 0.9508767851986696 1.043296459194633 1.085403067095868 0.8680378077130074 0.9765292799487338 1.0 12.40810654860114 -8.759848825922262 24.999996931440066 0.937684522904469 1.019499259827552 0.17025641553929383 0.06945249590036398 50.963632898436096 801036.9667305463 0.012889303689732188 0.014238860446141697 1.738405847181398e-09 8.759848825922262 0.08181473692308305 RPMSS(ph)PEMK ddPTM_A549_MK2206_60min_R1 3 RPMSSPEMK 9 1 P51610;A6NEM2;P51610-2;P51610-4;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.139)S(0.861)PEMK;RPMS(0.201)S(0.799)PEMK;RPMS(0.368)S(0.632)PEMK 90.65299999999999 0.00084848 26983800.0 11314.6 12310.4 10824.9 9541.2 15027.199999999999 11391.9 10670.099999999999 10626.1 16687.3 15490.2 16188.5 True False 13224.227864588942 12936.94677803027 12360.033592801406 11878.794428320749 12816.718786411473 12597.383296668788 12608.719053988485 12132.382216066442 12907.653194142322 11990.953061588878 12168.448670129235 1.0867636642172311 1.0631549779872533 1.015744399953173 0.9761962884784549 1.0532746723806785 1.0352497379220154 1.0361813075597723 0.99703606802802 1.0607476387542862 0.9854134562792652 1.0 13.570857633174604 -5.5964535611464274 4.031946173626171 1.0255981232965723 1.0823931249622982 0.389619333657243 0.026764653518842385 0.17515802087890542 5.378458273395736 0.003819075321367201 0.01773690267807243 2.5324824176590212e-06 5.5964535611464274 0.05679500166572593 RPMSS(ph)PEMK ddPTM_A549_PD325901_60min_R1 5 RPMSSPEMK 9 1 P51610;A6NEM2;P51610-2;P51610-4;H7C1C4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.226)S(0.774)PEMK;RPMS(0.109)S(0.891)PEMK;RPMS(0.05)S(0.95)PEMK;RPMS(0.263)S(0.737)PEMK;RPMS(0.383)S(0.617)PEMK 103.46 0.00027186 229568000.0 24881.9 26846.2 25047.2 26684.9 30202.400000000005 28441.999999999996 27927.0 28787.7 29285.700000000004 28811.4 33561.0 True False 27407.89217091334 29108.623490747083 26747.053613049247 28333.165667194986 28081.08761662361 28210.37778191503 28989.777267240777 28213.50673998622 28054.923872765066 26992.243287015724 29433.209760707578 0.9311893739670223 0.9889721076090788 0.9087372335706225 0.9626257515759931 0.9540613424401639 0.9584540052296644 0.9849342801185493 0.9585603122922182 0.9531724232882518 0.9170676085436503 1.0 14.845157259692229 RPNEDS(ph)DEDEEK ddPTM_A549_MK2206_60min_R1 5 RPNEDSDEDEEK 12 1 Q12996;H0YE74;E9PLP8 Q12996 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK 148.72 3.7953e-12 670797700.0 7879.119999999999 7198.9299999999985 6385.41 5914.36 7266.26 6005.47 5658.13 6306.05 6765.450000000001 9458.55 9202.859999999999 True False 9208.922830010775 7565.324787883865 7290.95715469057 7363.378465505709 6197.402779556421 6640.964849291642 6686.1389809789825 7199.951898968178 5233.086377203634 7321.856985751726 6917.535875985144 1.3312432338775992 1.0936444600377975 1.0539818347746908 1.0644510700794987 0.8958974540444768 0.9600188518495952 0.9665492309466038 1.040826101670606 0.7564957335994121 1.0584487188812737 1.0 12.756042505676087 -2.0000000032228815 0.43163593577262677 0.898993281062194 9.370036670964144 0.5486123813761146 0.090372573892762 34.574469768904464 0.38172177784799227 0.02093262411326679 257.690642637692 0.00999999992579041 2.0000000032228815 8.471043389901949 RPNEDS(ph)DEDEEK ddPTM_A549_PD325901_60min_R1 5 RPNEDSDEDEEK 12 1 Q12996;H0YE74;E9PLP8 Q12996 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK 166.09 9.768700000000001e-15 1073551900.0 11491.500000000002 10695.4 10946.83 10349.3 11225.800000000001 9030.32 9189.59 9708.0 10624.130000000001 11587.240000000002 11457.9 True False 12658.108620404817 11596.73889350957 11689.747712436354 10988.552756034342 10437.338534907596 8956.780067913054 9539.3048761866 9514.366324221328 10177.634762507287 10855.619688909257 10048.650937612436 1.2596823891080835 1.1540592827344205 1.1633151340426442 1.093535124690601 1.038680575104892 0.8913415465938346 0.9493119957506597 0.946830214651873 1.0128359344648006 1.0803061780438914 1.0 13.294714207694154 -6.445879202530744 1.5080508682668397 0.9892872411077919 1.2045389727236075 0.7619813947365508 0.05101344880735965 0.1405056546314109 0.6130696192448404 0.007026435692696211 0.023087349649199878 3.5819605420951317e-07 6.445879202530744 0.21525173161581568 RPNEDS(ph)DEDEEKGAVVPPVHDIYR ddPTM_A549_MK2206_60min_R1 7 RPNEDSDEDEEKGAVVPPVHDIYR 24 2 Q12996;H0YE74;E9PLP8 Q12996 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR 272.13 1.4630999999999996e-125 2079148400.0 30357.9 36370.4 31982.600000000002 31196.200000000004 44443.899999999994 34421.5 29949.5 29406.1 50370.799999999996 52198.09999999999 53511.4 True False 35481.571340604576 38221.498009461306 36518.21359875194 38839.27040045066 37906.261184478324 38063.96028285752 35390.93647739272 33574.50472740435 38961.894225638884 40406.51295684511 40223.04254049192 0.8821205234508509 0.9502388580124019 0.9078928716540927 0.9655975268740986 0.9424016382231322 0.9463222540795893 0.8798672164534845 0.8347082320688549 0.9686461233363075 1.0045613261644364 1.0 15.295734593267854 -8.976458034619922 20.160719297988067 0.986168021225051 0.9163474851830198 0.4704702358233509 0.03682869170695066 13.487226491030238 11550.801031941934 0.006723711826558885 0.00694930412607577 1.0557035097126167e-09 8.976458034619922 -0.0698205360420312 RPNEDS(ph)DEDEEKGAVVPPVHDIYR ddPTM_A549_PD325901_60min_R1 9 RPNEDSDEDEEKGAVVPPVHDIYR 24 2 Q12996;H0YE74;E9PLP8 Q12996 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR 263.73 5.773699999999998e-125 4174060000.0 50379.17 49172.08 50735.11 51446.69 56321.119999999995 54216.590000000004 54439.04 61300.62000000001 60345.93000000001 58769.719999999994 64135.1 True False 55493.62625121523 53315.98375102977 54178.29965960075 54624.43519738961 52365.31882851598 53775.068066493135 56510.7474573857 60077.9310446939 57809.80042072443 55058.98984949685 56246.889285896 0.9866079165578023 0.9478921310657946 0.9632230394861329 0.971154776573338 0.9309904866445061 0.9560540813761468 1.004691071361272 1.0681111757012052 1.027786623485689 0.9788806198621722 1.0 15.779485690351878 -7.829851322185338 4.736323522871964 1.0183335623203538 0.958172369287256 0.5813894855760986 0.024041939343877227 0.10480800331906909 4.524076830265414 0.003573555185632042 0.005027133440684218 1.4796148377288754e-08 7.829851322185338 -0.06016119303309775 RPNKQEESES(ph)PVERPLK ddPTM_A549_MK2206_60min_R1 2 RPNKQEESESPVERPLK 17 3 D6RBF8;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3 D6RBF8 SRPK1 SRSF protein kinase 1 1 RPNKQEES(0.03)ES(0.97)PVERPLK;RPNKQEES(0.002)ES(0.998)PVERPLK 123.53 1.4143000000000002e-10 56861000.0 5245.0 4413.1 4540.8 4226.4 6518.8 4846.8 4932.6 5214.299999999999 6095.299999999999 6965.0 6823.6 True False 6130.22777206167 4637.707940125865 5184.753719497879 5261.868189730307 5559.893155402141 5359.685158954544 5828.7895713914195 5953.442993124025 4714.724282193983 5391.601662597416 5129.1117982205815 1.195183106398344 0.9041931863787417 1.0108482566702095 1.0258829202271984 1.0839875156028005 1.0449538574717663 1.1364130478523735 1.1607161682826692 0.9192087183261709 1.0511764755191921 1.0 12.324493302454329 -8.782581249976856 24.998205448739593 0.9618485605398599 1.0630937919281047 0.13188842494077202 0.08187345217252322 239.8078607274036 283548.2805816217 0.013708927268534081 0.014601382879088581 1.6497523285566187e-09 8.782581249976856 0.10124523138824482 RPNKQEESES(ph)PVERPLK ddPTM_A549_PD325901_60min_R1 5 RPNKQEESESPVERPLK 17 3 D6RBF8;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3 D6RBF8 SRPK1 SRSF protein kinase 1 1 RPNKQEES(0.026)ES(0.974)PVERPLK;RPNKQEES(0.015)ES(0.985)PVERPLK;RPNKQEES(0.001)ES(0.999)PVERPLK;RPNKQEES(0.031)ES(0.969)PVERPLK;RPNKQEES(0.331)ES(0.669)PVERPLK 152.81 1.0073999999999999e-17 258302700.0 26967.1 28610.9 27238.9 28403.199999999997 32111.600000000002 28436.899999999998 27546.899999999998 27528.2 29274.7 31679.199999999997 32444.399999999998 True False 29704.780139870236 31022.040952962278 29087.495554812027 30157.601155652545 29856.191995006066 28205.319314624157 28595.212353742063 26979.128455544887 28044.386164511525 29678.969905593887 28453.944481996976 1.043960009082912 1.0902544978461652 1.0222658434304566 1.059874182812632 1.0492813048783554 0.9912621897631759 1.0049647904470491 0.9481683101130244 0.9856062726999211 1.043052920988582 1.0 14.796341042280137 -7.247398969874834 4.5283221294374885 0.9900041441191387 1.054420214712975 0.5466803562252545 0.025883348222411236 0.08508737876315228 4.611535106421821 0.002968469741255727 0.0050729088594541425 5.657193453344644e-08 7.247398969874834 0.06441607059383636 RPNT(ph)SPDR ddPTM_A549_MK2206_60min_R1 5 RPNTSPDR 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RPNT(0.97)S(0.03)PDR;RPNT(0.906)S(0.094)PDR;RPNT(0.948)S(0.052)PDR;RPNT(0.706)S(0.294)PDR;RPNT(0.949)S(0.051)PDR 96.009 0.0015411 1293759000.0 6325.32 5469.84 4625.2300000000005 5528.57 6065.11 4762.49 4267.09 5255.4 5967.799999999999 7151.780000000001 7136.160000000001 True False 7392.879376773525 5748.231492424383 5281.1571630622775 6883.069898186938 5172.9403534026305 5266.45353071499 5042.365018892391 6000.369043987494 4616.102828618324 5536.187930873076 5364.0545240034235 1.378225993731306 1.071620630756421 0.9845457646692084 1.2831841785697973 0.9643713221508874 0.9818046231909683 0.9400286660637928 1.1186256621994888 0.8605622496866658 1.032090167260489 1.0 12.389108186540858 -2.000000000001467 0.3765898010933698 0.9451792525974133 6.047041907790078 0.42474514911019323 0.11061438912739738 35.24503770281755 0.42244431909797814 0.02612479886610497 132.66493433158456 0.009999999999966225 2.000000000001467 5.101862655192664 RPNT(ph)SPDR ddPTM_A549_PD325901_60min_R1 3 RPNTSPDR 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RPNT(0.863)S(0.137)PDR;RPNT(0.851)S(0.149)PDR;RPNT(0.786)S(0.214)PDR 82.417 0.0021861 1499566000.0 2074.19 2238.76 2403.2 2257.83 2285.97 2861.75 1864.1100000000001 2993.39 2352.76 2624.05 2876.58 True False 2284.7602418620268 2427.4281621289033 2566.295603615571 2397.2910311960263 2125.411353368377 2838.4448568101884 1935.0497261301323 2933.6844881809716 2253.8816791432932 2458.3670351768264 2522.778896143029 0.905652193838747 0.9622040860735344 1.017249513042571 0.9502580804291426 0.8424881612169142 1.125126288772182 0.7670310422718966 1.1628781629123974 0.8934122933203374 0.9744678928998972 1.0 11.300798054426169 RPNTS(ph)PDR ddPTM_A549_PD325901_60min_R1 2 RPNTSPDR 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RPNT(0.236)S(0.764)PDR;RPNT(0.229)S(0.771)PDR 80.916 0.0015975 1286270000.0 1961.99 1617.56 1566.8400000000001 1885.73 2227.51 1686.79 1673.5 2111.38 2200.89 2482.7 1864.48 True False 2161.169780459302 1753.8774580273127 1673.1751845743267 2002.2072592964412 2071.057382092326 1673.053341493442 1737.185958274339 2069.266869554432 2108.3942471011424 2325.9418982997668 1635.160779912519 1.3216864096843886 1.0726024496020172 1.0232481142703542 1.2244711858876405 1.2665772121828456 1.0231735998358218 1.062394585055592 1.2654822051597505 1.2894109698582308 1.4224545542391278 1.0 10.67521678275752 -11.07518284692739 1.42146124053969 1.0008344725434368 1.1799023467492067 0.0 0.16357594664257624 0.4711486963294505 1.7125071757797514 0.07889785008349741 0.01775073537600565 8.410409715116846e-12 11.07518284692739 0.17906787420576986 RPPEDFET(ph)PSGERPR ddPTM_A549_MK2206_60min_R1 2 RPPEDFETPSGERPR 15 2 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 RPPEDFET(0.942)PS(0.058)GERPR;RPPEDFET(0.995)PS(0.005)GERPR 68.567 0.00088709 12026400.0 1341.24 1494.8899999999999 1334.9099999999999 1175.05 1772.14 1709.17 1022.0999999999999 1403.12 1735.19 1628.17 2172.63 True False 1567.6085218303133 1570.9735158085582 1524.2203108912333 1462.9373027499987 1511.460553539663 1890.0332349447756 1207.8023397233044 1602.0165568747843 1342.1722355290433 1260.3652661868248 1633.1060094624506 0.9598939154882564 0.9619544026573364 0.9333260070440511 0.8958005752679434 0.9255128232840021 1.1573242790080078 0.7395737525458386 0.980962991742404 0.8218524870720607 0.7717596156551305 1.0 10.673402727957162 RPPEDFET(ph)PSGERPR ddPTM_A549_PD325901_60min_R1 1 RPPEDFETPSGERPR 15 2 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 RPPEDFET(0.806)PS(0.194)GERPR 64.249 0.0014426999999999999 7034100.0 1535.0 1533.6 1190.3 1288.8 1466.8 937.81 1208.8 1049.6 1277.0 1143.2 1518.1 True False 1690.8320699927253 1662.8418541696676 1271.080915855366 1368.4062489228324 1363.7770281852931 930.1727862899143 1254.8015454807407 1028.6649046047294 1223.3321308871216 1071.0181569002677 1331.3833240287881 1.2699814091679016 1.2489580004186025 0.95470695247185 1.0278078628640266 1.0243308621730975 0.6986513722247893 0.9424795420177642 0.7726286532506448 0.9188429123366951 0.8044401169599669 1.0 10.378710287960475 -5.761878235729883 4.74274807402728 0.9369718710761452 1.2672638767431352 0.6182605127913723 0.1051500685544436 0.0876020008806487 5.060391360457222 0.013869746738389137 0.05179516867516213 1.7303014203092884e-06 5.761878235729883 0.33029200566699 RPPEEDFRHS(ph)PEEDFR ddPTM_A549_MK2206_60min_R1 7 RPPEEDFRHSPEEDFR 16 2 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR 157.85 5.6766000000000004e-21 431511900.0 6231.73 6350.039999999999 5671.87 6058.59 8545.68 6986.7699999999995 5966.83 6082.14 9805.97 8883.15 9736.169999999998 True False 7283.493672829334 6673.229912786214 6476.226453270003 7542.944821980437 7288.621792393841 7726.105363957422 7050.925775101463 6944.3019707725625 7584.933451916353 6876.440245384384 7318.4102843779265 0.9952289349473715 0.9118414592074824 0.8849225722004583 1.0306807802347195 0.9959296499066644 1.0557081474988868 0.9634504627531688 0.9488812051978084 1.0364181778804278 0.9396084638849801 1.0 12.837314582908794 -6.271914972775743 24.950045263743217 1.010775847205704 0.9287820348558614 0.26747641349065976 0.04387009727961716 422.1902662382132 1005543.5788934479 0.005388921994092205 0.01265028304137985 5.346690279462007e-07 6.271914972775743 -0.0819938123498426 RPPEEDFRHS(ph)PEEDFR ddPTM_A549_PD325901_60min_R1 5 RPPEEDFRHSPEEDFR 16 2 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR 116.39 3.3042e-08 353945700.0 3606.1399999999994 3478.47 2967.0499999999997 3383.72 3945.2200000000003 3392.51 3500.38 3139.13 3953.12 4203.889999999999 4697.82 True False 3972.232678100044 3771.6128745915244 3168.4118553210637 3592.7246994143106 3668.1213574701296 3364.882523343105 3633.5888763814332 3076.5175895501548 3786.9841137451035 3938.4556679596444 4120.017921934603 0.9641299512199295 0.9154360359725132 0.7690286584562473 0.8720167648511841 0.8903168449684122 0.8167155063643715 0.8819352112612265 0.7467243220402158 0.9191669030330044 0.9559316834501284 1.0 12.008434897757459 -9.424660429816203 1.4266723893124456 0.9787762793899498 0.8580301136211401 0.3434191078315286 0.061830631040547306 0.25176935686755925 1.0544727311574345 0.014455621668609635 0.01181737059673158 3.761313824262577e-10 9.424660429816203 -0.1207461657688097 RPPEEDFRHS(ph)PEEDFRQS(ph)PQEHFR ddPTM_A549_MK2206_60min_R1 4 RPPEEDFRHSPEEDFRQSPQEHFR 24 3 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 2 RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR 161.04 3.4980000000000002e-34 237334000.0 3793.9700000000003 3508.5600000000004 2889.33 2897.54 5485.46 4992.550000000001 4387.03 3733.9599999999996 6402.380000000001 4767.56 5128.870000000001 True False 4434.299382339148 3687.1307177285794 3299.080440529602 3607.4374300755153 4678.5561005449235 5520.858327213524 5184.096564363885 4263.260264772912 4952.251152499979 3690.5648847857788 3855.23002938912 1.150203580210695 0.9563970734874213 0.8557415291383683 0.9357255994001301 1.2135608160549278 1.432043817133353 1.3446918925315932 1.1058381036341032 1.284553999306933 0.957287854849628 1.0 11.91260122842319 -6.760491318487797 24.999705892593177 1.1787105765296306 0.9647386848840708 0.33179145194593107 0.14697240467741113 25.789327625224736 680009.6651546385 0.023205424924189838 0.04620277023958636 1.7358359617476557e-07 6.760491318487797 -0.21397189164555985 RPPEEDFRHS(ph)PEEDFRQS(ph)PQEHFR ddPTM_A549_PD325901_60min_R1 4 RPPEEDFRHSPEEDFRQSPQEHFR 24 3 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 2 RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR 143.09 3.5925999999999997e-28 293886000.0 5475.8 6332.599999999999 6516.5 5922.900000000001 7431.4 8222.0 6866.6 6951.5 6728.2 7372.199999999999 8008.099999999999 True False 6031.6991849290935 6866.270426261629 6958.748876897836 6288.74408111813 6909.444100938223 8155.042757995416 7127.912220547697 6812.846879153747 6445.43715194576 6906.718033852474 7023.154467528446 0.8588304888945066 0.9776618837030895 0.9908295352283096 0.8954301247671739 0.9838092174797004 1.1611652279186304 1.0149160542465068 0.9700551099442486 0.9177410495164585 0.9834210632537963 1.0 12.777903450872122 -5.261157493090135 21.63266157431291 0.9768304035002234 0.8588303679918136 0.23065927057733382 0.06496078841018578 4.558607228888898 348441.08592134155 0.009536264385819703 0.07681061714452116 5.480781731287872e-06 5.261157493090135 -0.11800003550840987 RPPEEPPVAAQVAAQVAAPVALPS(ph)PPTPSDGGTK ddPTM_A549_PD325901_60min_R1 1 RPPEEPPVAAQVAAQVAAPVALPSPPTPSDGGTK 34 1 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 RPPEEPPVAAQVAAQVAAPVALPS(0.801)PPT(0.186)PS(0.011)DGGT(0.003)K 51.566 0.0025508 860650.0 326.28 490.49 353.29 403.74 566.44 545.32 279.66 643.61 446.17 517.19 568.97 True False 359.403705405359 531.8253136748046 377.26638390535356 428.67810283993197 526.6552085119154 540.8790947202696 290.30261433582393 630.7726936477223 427.41902649796947 484.5345351358025 498.99029699799735 0.7202619120403486 1.0658029161575844 0.7560595590235849 0.8590910593230482 1.0554417824962818 1.0839471187601877 0.5817800788559001 1.2640981146177557 0.8565678111766668 0.9710299740312328 1.0 8.962867952012667 -5.2355077068209255 22.62678153677463 0.9377703094447575 0.7202608886886918 0.12140681824949484 0.17467041389064297 3374.058894012895 2943878.3431069218 0.021350307149235585 1.8117841099427894 5.8142311450849624e-06 5.2355077068209255 -0.21750942075606572 RPPEEPPVAAQVAAQVAAPVALPS(ph)PPTPSDGGTKRPGLR ddPTM_A549_PD325901_60min_R1 1 RPPEEPPVAAQVAAQVAAPVALPSPPTPSDGGTKRPGLR 39 3 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 RPPEEPPVAAQVAAQVAAPVALPS(0.373)PPT(0.373)PS(0.134)DGGT(0.119)KRPGLR 43.626000000000005 0.0049137 1530000.0 721.38 605.87 685.23 1038.2 942.04 1003.0 656.25 597.56 1136.1 914.36 1025.4 True False 794.6139665481115 656.9287912009502 731.7338284227272 1102.3272560767255 875.8743602615724 994.8319005435908 681.2239528637789 585.6411970232483 1088.3536678941737 856.6271535543457 899.2823005461555 0.8836090358561751 0.7305034145584559 0.8136864563867519 1.2257855574464835 0.973970420333674 1.1062509513857948 0.7575195825049101 0.6512317618923162 1.2102469571937429 0.9525675675303469 1.0 9.812630263986208 -8.7916762833656 24.999954341482006 1.099283270632373 0.9011793574907739 0.13693336691745184 0.16965845682478597 236.42211400765686 195473.3893466192 0.031054197942771953 0.03306165879332511 1.6155623242149139e-09 8.7916762833656 -0.19810391314159903 RPPEEPPVAAQVAAQVAAPVALPSPPT(ph)PSDGGTK ddPTM_A549_MK2206_60min_R1 2 RPPEEPPVAAQVAAQVAAPVALPSPPTPSDGGTK 34 1 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 RPPEEPPVAAQVAAQVAAPVALPS(0.095)PPT(0.699)PS(0.162)DGGT(0.045)K;RPPEEPPVAAQVAAQVAAPVALPS(0.006)PPT(0.818)PS(0.144)DGGT(0.032)K 84.969 1.8221e-06 11063200.0 1199.93 1289.11 971.6399999999999 840.24 1944.92 1205.32 1125.49 1062.31 1694.81 2105.86 2323.22 True False 1402.4488485281142 1354.7201927660042 1109.4331624411814 1046.0988377198069 1658.8248444199448 1332.8661623733376 1329.9769644214675 1212.8956956879326 1310.9382410554344 1630.1447634167123 1746.3003563898844 0.8030971553068842 0.775765857121285 0.6353048937896946 0.5990371781647004 0.9499080947616725 0.763251383129053 0.7615969151898476 0.6945515937449295 0.7506945962981584 0.9334847567612596 1.0 10.770086002510999 -10.59769602424108 0.6685912011729632 1.0204883137592788 0.7438965915195731 0.465200236656219 0.089064296593416 0.5564530623301558 0.3966191147098816 0.08679307110319172 0.018218906390292507 2.525247650780139e-11 10.59769602424108 -0.27659172223970574 RPPEEPPVAAQVAAQVAAPVALPSPPT(ph)PSDGGTK ddPTM_A549_PD325901_60min_R1 2 RPPEEPPVAAQVAAQVAAPVALPSPPTPSDGGTK 34 1 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 RPPEEPPVAAQVAAQVAAPVALPS(0.008)PPT(0.841)PS(0.142)DGGT(0.009)K;RPPEEPPVAAQVAAQVAAPVALPS(0.003)PPT(0.762)PS(0.231)DGGT(0.004)K 117.81 4.7043e-21 21115000.0 1519.53 1753.1100000000001 1673.68 1784.13 2221.49 1465.18 1671.87 2244.3 1717.58 1578.8400000000001 1945.7199999999998 True False 1673.7915669811366 1900.8507322400808 1787.2659894554392 1894.3316580467808 2065.460206124453 1453.2480598588818 1735.4939277323676 2199.535675880711 1645.396085645342 1479.1517729534805 1706.4087749353096 0.9808854663470601 1.1139480528703578 1.0473844343206655 1.110127705548511 1.210413493216334 0.8516412252474351 1.01704465730854 1.288985211626151 0.9642449744831625 0.8668214760027565 1.0 10.736747574301724 RPPES(ph)PPIVEEWNSR ddPTM_A549_MK2206_60min_R1 4 RPPESPPIVEEWNSR 15 1 A0A3B3IU46;Q9BTL3 A0A3B3IU46 FAM103A1 RNMT-activating mini protein 1 RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR 132.83 8.568300000000001e-10 79597000.0 4308.5 4555.400000000001 3183.23 3129.69 5651.4 4562.4400000000005 3845.6 4554.87 6623.8 6138.5 6710.200000000001 True False 5035.66946728841 4787.250402313423 3634.6598798707805 3896.464190497122 4820.0865463643095 5045.234372497438 4544.2957417473235 5200.536771204346 5123.519876035061 4751.808586626598 5043.872147901358 0.99837373343883 0.9491220756468401 0.7206090426743035 0.7725144643323986 0.9556321819873723 1.0002700751637106 0.900953792739989 1.0310603874779365 1.0157909887083165 0.9420953678621135 1.0 12.30031599134995 -6.950783840355223 6.915543466607701 0.9994506002482436 0.8566557798475195 0.3313379468906714 0.07891779729180748 0.1575632456032906 17.321048151768572 0.011423052633937798 0.021643918628660132 1.1199951954628375e-07 6.950783840355223 -0.1427948204007241 RPPES(ph)PPIVEEWNSR ddPTM_A549_PD325901_60min_R1 2 RPPESPPIVEEWNSR 15 1 A0A3B3IU46;Q9BTL3 A0A3B3IU46 FAM103A1 RNMT-activating mini protein 1 RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR 139.59 1.0688e-10 121901000.0 5431.1 5055.7 4274.799999999999 4178.1 4664.1 5214.8 4204.1 4452.3 6103.599999999999 5333.299999999999 6484.2 True False 5982.461273835501 5481.76158198069 4564.913634460656 4436.1717478464325 4336.509706271495 5172.332397761427 4364.089326071792 4363.495383738216 5847.086917840748 4996.554527813326 5686.684506730427 1.0520121639867677 0.9639644287445167 0.8027372767133277 0.7800980945216918 0.7625725853331684 0.9095514955401092 0.7674224446435725 0.7673180002466884 1.0282066661022744 0.878641064384651 1.0 12.47337205146301 -8.775654733127416 24.999129768318067 1.0133198333045796 0.8467791931515521 0.18987396599949224 0.09743022304629831 167.97665039978065 295402.78810604394 0.01594403418964647 0.017012780412330012 1.6762749957069688e-09 8.775654733127416 -0.1665406401530275 RPPGPDLS(ph)PDGPR ddPTM_A549_MK2206_60min_R1 2 RPPGPDLSPDGPR 13 1 H0Y9P2;P22455-3;P22455-2;P22455;J3KPQ0 H0Y9P2 FGFR4 Fibroblast growth factor receptor 4;Receptor protein-tyrosine kinase 1 RPPGPDLS(1)PDGPR;RPPGPDLS(1)PDGPR 79.837 0.00030582 95473000.0 3316.1000000000004 3471.7 3037.2 5906.2 3448.1 2205.8 2266.8 2543.2 4462.5 3829.6 3648.6 True False 3875.776609138933 3648.394701170371 3467.9206300341243 7353.219265139391 2940.8890576704503 2439.216291908462 2678.6482180655366 2903.70638822335 3451.7508751481723 2964.490700227287 2742.551923762764 1.4132008132853842 1.3302919334211898 1.2644867723328859 2.681159543937028 1.0723184608426917 0.8893965765147201 0.9766991811008078 1.0587607706035638 1.2585908931169447 1.080924183984099 1.0 11.421303219582594 RPPGPDLS(ph)PDGPR ddPTM_A549_PD325901_60min_R1 2 RPPGPDLSPDGPR 13 1 H0Y9P2;P22455-3;P22455-2;P22455;J3KPQ0 H0Y9P2 FGFR4 Fibroblast growth factor receptor 4;Receptor protein-tyrosine kinase 1 RPPGPDLS(1)PDGPR;RPPGPDLS(1)PDGPR 101.78 5.828e-05 60052000.0 5241.5 6033.9 5593.9 5889.5 6646.1 6389.0 6435.9 7113.700000000001 7680.299999999999 8396.8 9169.0 True False 5773.613221411641 6542.397928973892 5973.53569285334 6253.281038975028 6179.300863800298 6336.970102266201 6680.821696359611 6971.81167291031 7357.52369996269 7866.624614993151 8041.271127079875 0.7179975814978251 0.813602454833495 0.7428596298334966 0.7776483270059641 0.7684482672137263 0.7880557690594151 0.8308166197581873 0.8670036817229005 0.9149702309110571 0.978281230749877 1.0 12.973207858676199 -8.636049891486467 0.5257709540294097 0.9906021800194003 0.75314205170247 0.9330892641441497 0.02310089163778531 0.11785701528407502 0.07466797393823164 0.008025085203247762 0.008544800661561056 2.3117991968318027e-09 8.636049891486467 -0.2374601283169303 RPPIS(ph)DSEELSAK ddPTM_A549_PD325901_60min_R1 1 RPPISDSEELSAK 13 1 P42568-2;P42568 P42568-2 MLLT3 Protein AF-9 1 RPPIS(0.904)DS(0.096)EELSAK 75.46300000000001 0.00028464 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RPPISDS(ph)EELSAK ddPTM_A549_PD325901_60min_R1 1 RPPISDSEELSAK 13 1 P42568-2;P42568 P42568-2 MLLT3 Protein AF-9 1 RPPIS(0.416)DS(0.584)EELSAK 91.45700000000001 7.600699999999999e-05 6659700.0 1711.6 1535.0 1833.5 2146.4 1647.1 1938.3 1882.0 1237.7 1594.7 1657.2 2009.7 True False 1885.360371986677 1664.3598370829689 1957.932335731173 2278.978253171916 1531.4133781865255 1922.5151274413167 1953.6205398699153 1213.0131025431333 1527.6803047186331 1552.5641091804782 1762.5196405379452 1.0696960922439644 0.9443071151110597 1.1108712156725726 1.2930228978761 0.8688773406911466 1.0907765696469283 1.1084248339346978 0.6882267151206922 0.8667593084252747 0.8808776217135454 1.0 10.783423618853698 RPPQADAS(ph)PPYAR ddPTM_A549_MK2206_60min_R1 1 RPPQADASPPYAR 13 1 Q9P2Y4 Q9P2Y4 ZNF219 Zinc finger protein 219 1 RPPQADAS(0.993)PPY(0.007)AR 47.548 0.014365000000000001 5727900.0 561.22 727.5 574.76 671.85 931.17 913.01 631.94 676.05 949.43 1260.5 1024.9 True False 655.9402154883602 764.5266425962624 656.2696106013484 836.4532801604929 794.1961265134404 1009.6241121930123 746.7553180361463 771.8821578162931 734.3856209281637 975.7521745447298 770.3890441989965 0.8514402176764686 0.9923903362244338 0.851867787506892 1.0857543814504604 1.0309026750752888 1.310537993492311 0.9693223490899677 1.0019381293497611 0.9532659199375466 1.2665706786617887 1.0 9.589443376351522 -6.255429732862658 24.939249072126692 1.011908112276303 0.9079485405690041 0.16459847178002607 0.1274966016423756 688.2764413018987 2856246.5112342094 0.014750261104058918 0.03793216458524988 5.553544640167616e-07 6.255429732862658 -0.10395957170729886 RPPQADAS(ph)PPYAR ddPTM_A549_PD325901_60min_R1 1 RPPQADASPPYAR 13 1 Q9P2Y4 Q9P2Y4 ZNF219 Zinc finger protein 219 1 RPPQADAS(0.999)PPY(0.001)AR 53.255 0.018075 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RPPRS(ph)PER ddPTM_A549_MK2206_60min_R1 1 RPPRSPER 8 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RPPRS(1)PER 43.308 0.023178 318140000.0 753.32 896.36 668.04 561.96 812.66 661.63 759.33 727.64 1158.4 979.63 934.92 True False 880.4619990942804 941.9808953368876 762.7781172421958 699.6402252273433 693.1187905241926 731.6432474455505 897.290432073277 830.7851983040421 896.0242495846826 758.3309026174167 702.753561520661 1.252874474501535 1.3404142602971258 1.0854133781857327 0.9955698036071409 0.98628997201292 1.0411092700297047 1.2768208959790472 1.1821856818574328 1.2750191513022155 1.0790851076962085 1.0 9.45687504990674 -5.7634503992288515 24.99709831526754 1.1189081180863905 1.296644394793051 0.3444549063664051 0.10128370164760045 54.70640201059249 680049.1424922742 0.017617233820984117 0.05908072915273019 1.7240489834111338e-06 5.7634503992288515 0.1777362767066606 RPPRS(ph)PER ddPTM_A549_PD325901_60min_R1 1 RPPRSPER 8 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RPPRS(1)PER 44.425 0.019568000000000002 380800000.0 1388.3 1716.6 1405.8 1453.0 1552.5 1772.2 1683.5 1540.4 1783.1 1630.3 2019.5 True False 1529.2391939875574 1861.2639064082236 1501.2060417621394 1542.7485099975754 1443.4577558342435 1757.7677907710374 1747.5665137465476 1509.6755135795772 1708.162507897281 1527.3625797712618 1771.1143026652628 0.8634333716837364 1.0508999354854167 0.847605397067286 0.8710609516709165 0.8149997736803632 0.9924643418698946 0.9867045346066714 0.8523873988865319 0.9644563907178387 0.8623738047131171 1.0 10.79044160717936 -9.166647518228084 0.6085171075609835 0.9977838165473715 0.9073643478872283 0.0 0.08075878217096408 0.8022221136665214 0.6682722449679105 0.02615026147475764 0.01938145120171967 6.813221085069692e-10 9.166647518228084 -0.09041946866014317 RPPRS(ph)PGMEPPFSHR ddPTM_A549_MK2206_60min_R1 3 RPPRSPGMEPPFSHR 15 2 G3V470;Q99973-2;Q99973 G3V470 TEP1 Telomerase protein component 1 1 RPPRS(1)PGMEPPFSHR;RPPRS(1)PGMEPPFSHR;RPPRS(1)PGMEPPFSHR 84.581 3.3642e-05 14900800.0 2542.07 2465.43 2030.1000000000001 2419.5 2831.3999999999996 2666.5399999999995 2276.703 2205.42 2990.7999999999997 3695.09 3954.74 True False 2971.109268355541 2590.9098562970476 2317.9987063849217 3012.277608615482 2414.9048107328986 2948.711492894003 2690.3504649790293 2518.0450388154877 2313.388575326198 2860.3666026485407 2972.668912728597 0.9994753386876091 0.8715770011261916 0.7797702248170123 1.013324287719122 0.81236924852027 0.991940770890424 0.9050286271233519 0.847065419237754 0.7782193857582178 0.9622217228433372 1.0 11.537543073651456 -7.6960316416067105 0.006122186887258932 1.7765344460241512 7.119762676912548e-07 0.0 0.08809310154950441 18089.059941806616 50.14710169656701 7180.632827076256 7368.904834982947 2.0135775403086148e-08 7.6960316416067105 -1.7765337340478835 RPPRS(ph)PGMEPPFSHR ddPTM_A549_PD325901_60min_R1 2 RPPRSPGMEPPFSHR 15 2 G3V470;Q99973-2;Q99973 G3V470 TEP1 Telomerase protein component 1 1 RPPRS(1)PGMEPPFSHR;RPPRS(1)PGMEPPFSHR 75.55 0.00013681 13094500.0 2473.2 2889.6000000000004 2836.7 2675.5 3492.7 3267.0 2960.2 3287.7 3327.8 3551.0 4108.5 True False 2724.277443326389 3133.116733052082 3029.21552046284 2840.7595584986334 3247.3848011608766 3240.394635170397 3072.852030883595 3222.124244349244 3187.9441387362303 3326.789253982547 3603.180545927326 0.7560757526862314 0.8695419763501563 0.8407060045566579 0.7884033348563516 0.9012550883222865 0.8993150895069675 0.8528165579592838 0.8942444607698634 0.8847583678091188 0.9232924111290555 1.0 11.815055227902809 -14.999999999826317 0.09276241381314994 1.4871692186792376 0.7365328739285429 0.5738651399056997 0.04082553558324355 42.641886461973726 0.28753570623361907 4.080692772465965 0.2997887358334788 1.0000000003999206e-15 14.999999999826317 -0.7506363447506946 RPPS(ph)GTSTTSK ddPTM_A549_MK2206_60min_R1 1 RPPSGTSTTSK 11 1 H7C163;A0A0A0MRS7;Q68DC2;Q68DC2-4 H7C163 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 1 RPPS(0.982)GT(0.012)S(0.003)T(0.001)T(0.001)SK 41.967 0.034829 2382800.0 1272.1 1296.5 1239.0 1053.9 1493.4 1105.7 1035.2 1272.5 1715.8 1770.5 2147.0 True False 1486.7993801410196 1362.4863122007607 1414.708830703373 1312.1055473113681 1273.7228382950177 1222.7044400957413 1223.282440154158 1452.88077186781 1327.1740395695758 1370.5428203343472 1613.8406458144646 0.9212801672811194 0.8442508346374857 0.8766099889555113 0.8130329042798284 0.7892494476443194 0.7576364142685682 0.7579945661467699 0.900262845427702 0.8223699427893543 0.8492429682502319 1.0 10.656282415419518 -10.64742756917183 0.6998542305167583 1.0128580568231327 0.8268276061593857 0.08247978970439962 0.06688662028420357 0.47257438026385007 0.3674676697223915 0.051344657835566465 0.010559532630177566 2.2520209733073523e-11 10.64742756917183 -0.18603045066374702 RPPS(ph)PDVIVLS(ph)DNEQPS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 3 RPPS(0.997)PDVIVLS(0.987)DNEQPS(0.676)S(0.339)PR 65.141 0.00030531 30425000.0 2691.9 2446.1 2765.6 2800.6 2870.6 2753.6 2962.6 3323.4 2922.6 3374.3 2803.7 True False 2965.1797063279587 2652.241431588697 2953.2902469038054 2973.5867013759166 2668.978959032385 2731.1755945531695 3075.3433641969264 3257.112179843137 2799.7732856152707 3161.246122138358 2458.8626741186445 1.2059151320399781 1.0786456110402212 1.201079782937607 1.2093341904267874 1.085452631057997 1.1107475107499174 1.2507178203025322 1.324641759837449 1.138645649098245 1.285653792467884 1.0 11.263775448266138 -10.032833836497446 0.9770119955674228 1.0156933576763645 1.1764474586418225 0.0 0.10729188505783864 0.3359822337770947 0.646712484630022 0.028209228658954227 0.014365869910483888 9.271845015103048e-11 10.032833836497446 0.16075410096545806 RPPS(ph)PDVIVLS(ph)DNEQPSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 3 RPPS(1)PDVIVLS(1)DNEQPS(0.066)S(0.935)PR 99.931 2.1400999999999998e-08 28974000.0 2399.8 2678.4 2447.5 2589.1 3080.5 3139.4 3099.1 3238.1 3017.0 3408.9 3121.1 True False 2643.4259293606146 2904.1181678456173 2613.602068013112 2749.0228267272696 2864.1363071480737 3113.833767264751 3217.0379463925915 3173.5135552596926 2890.2059819001156 3193.6614722334866 2737.224486283019 0.9657322381147566 1.0609718648941466 0.9548365803062874 1.0043103298627407 1.0463651488948182 1.1375880140153005 1.1752919654613823 1.1593910441628144 1.055889276302959 1.166751754647015 1.0 11.41849804306478 -5.255664807903608 22.955836660098523 1.0484383581348813 0.9657321258250863 0.05084505369115855 0.07605011032758632 407.35335829364266 1619200.5971737332 0.010359460580869263 0.12340063006384333 5.550539429345934e-06 5.255664807903608 -0.08270623230979501 RPPS(ph)PDVIVLS(ph)DNEQPSSPR ddPTM_A549_MK2206_60min_R1 2 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLS(0.999)DNEQPSSPR;RPPS(1)PDVIVLS(0.998)DNEQPS(0.001)S(0.001)PR 103.21 3.7905e-10 13365800.0 2088.99 1494.52 1766.0 1224.5700000000002 2189.6000000000004 1546.8899999999999 1374.96 1443.4099999999999 2265.7 2582.1 2297.5 True False 2441.5604410980204 1570.5846843889574 2016.445355142982 1524.5897049730363 1867.5127405455821 1710.5808730575218 1624.7724342294814 1648.017787757734 1752.5225675794313 1998.8018166536667 1726.9673422257722 1.4137849520369372 0.9094466617792183 1.1676221697071127 0.8828132806542219 1.0813827771280669 0.990511419198506 0.9408240645335084 0.9542842805780649 1.0147977467371923 1.1574056832351822 1.0 10.754025085737142 -5.253600256041054 24.993037015142164 1.0010070525623738 1.413785152268431 0.6286120802138608 0.08900502446385587 335.9080331169948 1070931.5789887747 0.008767221397808694 0.13179692277591723 5.576988435807051e-06 5.253600256041054 0.4127780997060573 RPPS(ph)PDVIVLS(ph)DNEQPSSPR ddPTM_A549_PD325901_60min_R1 2 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLS(1)DNEQPSSPR;RPPS(1)PDVIVLS(1)DNEQPSSPR 153.28 1.2162e-22 37953000.0 3889.8999999999996 4220.200000000001 4007.9 4264.5 4157.2 4053.4 3842.1000000000004 4469.1 3775.5 4284.7 4449.5 True False 4284.79978440697 4575.85106479319 4279.900195460576 4527.908479617796 3865.2126135614258 4020.3904543004865 3988.3132179777926 4379.960294558875 3616.8288646549177 4014.163310768521 3902.2397077044297 1.0980360268353653 1.1726217268915613 1.0967804430390342 1.16033581193848 0.9905113224925934 1.0302776752444973 1.0220574635903128 1.1224221530807685 0.9268597358368303 1.0286818882097668 1.0 11.93008668754355 -7.149025605358918 0.5619281194000859 0.9708274498009295 1.150483000350886 0.35659441217004784 0.05869237821327788 0.5716323745168096 0.3258527108812749 0.01318929044847481 0.04610495255635746 7.09535933543225e-08 7.149025605358918 0.1796555505499564 RPPS(ph)PDVIVLSDNEQPSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLSDNEQPS(0.334)S(0.666)PR;RPPS(1)PDVIVLSDNEQPS(0.089)S(0.911)PR 198.87 2.0611999999999996e-55 49849000.0 5009.6 5601.7 5705.4 5174.799999999999 7061.200000000001 5606.0 5555.1 6641.4 6040.1 5472.0 6598.9 True False 5518.170904127394 6073.77491816786 6092.602753357313 5494.4356431765 6565.245671817555 5560.346594663379 5766.502370367362 6508.93206692249 5786.255602013554 5126.496986142636 5787.277133873636 0.9535003727104877 1.0495047632361199 1.0527580781809411 0.9493990897752073 1.1344273861347292 0.9607880296794489 0.9964102697994751 1.1246967989186003 0.9998234866178946 0.8858219275756861 1.0 12.498669016396313 RPPS(ph)PDVIVLSDNEQPSSPR ddPTM_A549_MK2206_60min_R1 2 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 RPPS(1)PDVIVLSDNEQPSSPR;RPPS(1)PDVIVLSDNEQPSSPR 97.395 4.7118999999999997e-07 34429000.0 706.73 1071.8400000000001 928.24 1000.6500000000001 1234.0900000000001 997.5 677.8299999999999 1038.23 1764.67 1031.19 1348.51 True False 826.0087461104189 1126.392077801207 1059.8783898402728 1245.809294920885 1052.5569957891373 1103.054787913089 800.9829370263647 1185.4022819460251 1364.9750625989302 798.243462807442 1013.6377500173558 0.8148954062694249 1.111237301276438 1.0456185060413596 1.2290478476157325 1.0383956159595626 1.088213997450472 0.7902063010307677 1.169453566548531 1.3466103275805965 0.7875036844215543 1.0 9.985326444273854 RPPS(ph)PDVIVLSDNEQPSSPR ddPTM_A549_PD325901_60min_R1 2 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 RPPS(0.998)PDVIVLS(0.002)DNEQPSSPR;RPPS(1)PDVIVLSDNEQPSSPR 165.79 6.3361e-28 46356000.0 7427.1 7061.4 8762.8 7320.299999999999 8138.299999999999 8005.8 8805.3 8767.5 8029.4 8984.8 8396.3 True False 8181.09372445796 7656.488959985452 9357.49630299706 7772.458305392468 7566.693883610838 7940.6034191145345 9140.39050994504 8592.625334529308 7691.95224099065 8417.498194644439 7363.608328531003 1.1110169579171574 1.039774064342838 1.2707759410207287 1.0555230477532782 1.0275796248278117 1.078357656306611 1.2412923260094817 1.1669041794681503 1.0445900838027258 1.1431213909123925 1.0 12.846197176217697 -8.925683372122355 4.792512941947399 1.019002835920462 1.1227511675497308 0.0379148858636108 0.08333749196438461 0.2019278902031459 8.248579351880927 0.01345662691268554 0.01410905910566648 1.1866335630643698e-09 8.925683372122355 0.10374833162926889 RPPS(ph)PEPSTK ddPTM_A549_MK2206_60min_R1 12 RPPSPEPSTK 10 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RPPS(0.944)PEPS(0.025)T(0.03)K;RPPS(0.817)PEPS(0.081)T(0.103)K;RPPS(1)PEPSTK;RPPS(0.999)PEPS(0.001)TK;RPPS(1)PEPSTK;RPPS(0.999)PEPS(0.001)TK;RPPS(1)PEPSTK;RPPS(0.999)PEPSTK;RPPS(0.999)PEPSTK;RPPS(1)PEPSTK;RPPS(1)PEPSTK;RPPS(1)PEPSTK 166.7 9.8107e-10 13523523600.0 66602.8 80490.26 69439.86 73952.40999999999 89812.63 69482.65999999999 64045.6 65311.72 117114.29 107706.8 106669.4 True False 77843.72435787797 84586.8704323028 79287.4763073493 92070.7537698496 76601.31110107158 76835.26896234317 75681.85650032575 74569.85631875384 90588.09030809117 83375.75907437879 80180.44405432769 0.9708567378990016 1.0549563728406077 0.9888630231784031 1.1482943859411083 0.9553615224326895 0.9582794142457238 0.9438942050389015 0.9300254843715721 1.129802801375253 1.039851550558713 1.0 16.290962786975804 -8.760457721479725 24.999999965302774 1.0612957635352758 0.9967080844165095 0.15400113400106707 0.06497100123636351 39.38039934751532 1002898.4396141672 0.012685317708170258 0.013990355635478133 1.7359702511597521e-09 8.760457721479725 -0.06458767911876628 RPPS(ph)PEPSTK ddPTM_A549_PD325901_60min_R1 17 RPPSPEPSTK 10 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RPPS(1)PEPSTK;RPPS(0.995)PEPS(0.005)TK;RPPS(1)PEPSTK;RPPS(1)PEPSTK;RPPS(1)PEPSTK;RPPS(0.999)PEPS(0.001)TK;RPPS(0.999)PEPS(0.001)TK;RPPS(0.998)PEPS(0.002)T(0.001)K;RPPS(0.996)PEPS(0.002)T(0.002)K;RPPS(1)PEPSTK;RPPS(1)PEPSTK;RPPS(0.98)PEPS(0.015)T(0.005)K;RPPS(1)PEPSTK;RPPS(0.999)PEPS(0.001)TK;RPPS(0.993)PEPS(0.006)T(0.001)K;RPPS(1)PEPSTK;RPPS(1)PEPSTK 160.56 7.499899999999999e-09 23003305600.0 93558.31000000004 118288.50000000001 94608.06 133082.14 117815.44 107135.83 103017.79000000001 104948.42999999998 146317.7 121385.69 118892.85 True False 103056.28075721243 128257.087028527 101028.73187608142 141302.32153633077 109540.4899356033 106263.35132125119 106938.18837194786 102855.15123319929 140168.47590250784 113721.37681758858 104269.78317387268 0.9883618975726006 1.2300503858788585 0.9689166774962338 1.3551607880559733 1.0505487457755769 1.0191193276392854 1.0255913565450265 0.9864329636294107 1.3442866344967181 1.0906455672584943 1.0 16.66996160754664 RPPSPEPSTK ddPTM_A549_PD325901_60min_R1 1 RPPSPEPSTK 10 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 54.784 0.018681 3281700.0 2261.6 2184.0 2071.9 2015.2 2606.9 2198.9 2031.2 2370.0 2454.1 2413.7 2791.5 False True 2491.195967098077 2368.0533447486664 2212.5115933468314 2139.6743271487353 2423.800337316771 2180.992887442971 2108.4984275152897 2322.728490770968 2350.962711362636 2261.2985700753807 2448.16319677647 1.017577574231272 0.9672775686958756 0.9037435070750494 0.8739917052776848 0.9900485149471335 0.890869076994015 0.8612573011029568 0.9487637481967446 0.960296566200399 0.923671499127535 1.0 11.257484017256582 -9.300324198839467 1.1514040987286216 0.9898311711180332 0.9289007906419068 0.0027439289994521943 0.05030029381026708 0.44909928223493467 1.2424675922613417 0.011609779208609913 0.009638553525779268 5.00813239265257e-10 9.300324198839467 -0.06093038047612642 RPPT(ph)PCS(ph)DPER ddPTM_A549_PD325901_60min_R1 2 RPPTPCSDPER 11 1 Q9BW71;Q9BW71-2;Q9BW71-3 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 RPPT(1)PCS(1)DPER;RPPT(1)PCS(1)DPER 63.662 0.010596 14302400.0 1739.81 1968.49 2071.12 1379.83 1611.12 1457.44 1421.0700000000002 2091.3 1493.3899999999999 1646.6 1701.72 True False 1916.4342304195725 2134.381560716255 2211.67865785631 1465.0589652787012 1497.9604892622638 1445.5710918526922 1475.1495964893413 2049.5873809068876 1430.6280117036172 1542.633394989486 1492.41922809187 1.2841125297412752 1.4301487950173122 1.4819419478292624 0.9816671734736692 1.0037129387414008 0.968609265173382 0.9884284313164413 1.3733321993763 0.9585966093004202 1.0336461538101578 1.0 10.543437137502512 -6.266088158053562 24.990480187777948 1.0095727063778337 1.4018758697702354 0.633943103483875 0.12045632938866958 163.81469821047213 880622.1668555954 0.016976125761307092 0.04067884916074774 5.418908800372197e-07 6.266088158053562 0.3923031633924017 RPPT(ph)PCSDPER ddPTM_A549_MK2206_60min_R1 2 RPPTPCSDPER 11 1 Q9BW71;Q9BW71-2;Q9BW71-3 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 RPPT(0.938)PCS(0.062)DPER;RPPT(0.998)PCS(0.002)DPER 75.589 0.00080651 41615000.0 2694.0 3088.7 2933.7 2448.5 3498.8 2595.3 2431.5 2431.6000000000004 3907.0 3916.5 4048.8999999999996 True False 3148.6813380236667 3245.901637095634 3349.7427737162916 3048.382609917342 2984.1311548323347 2869.932923379286 2873.272076154207 2776.286746462685 3022.0707381969546 3031.759929872619 3043.446386044801 1.0345775606435528 1.0665217077518294 1.100641295695551 1.0016219191161624 0.9805105056279467 0.942987836598295 0.9440849982865153 0.9122180562118228 0.9929764992917698 0.9961601241849477 1.0 11.571490235899672 -6.421192555700126 4.96792285106463 0.9812960514990914 1.0666578528198518 0.6503326338731383 0.030988289964861842 0.134248816398488 5.178384467271591 0.005040309172145146 0.01191824909624658 3.7914684313441893e-07 6.421192555700126 0.08536180132076043 RPPT(ph)PCSDPER ddPTM_A549_PD325901_60min_R1 2 RPPTPCSDPER 11 1 Q9BW71;Q9BW71-2;Q9BW71-3 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 RPPT(0.978)PCS(0.022)DPER;RPPT(0.981)PCS(0.019)DPER 50.352 0.016462 44207000.0 8230.3 9102.2 7307.700000000001 8975.2 8983.2 8411.3 8311.0 8404.1 8045.8 8942.1 10895.8 True False 9065.833997173366 9869.27433817368 7803.644466769942 9529.57771984187 8352.251022357597 8342.801161557625 8627.279652953704 8236.473632611094 7707.663006023185 8377.494279931669 9555.68567416696 0.9487371504571493 1.0328169714554847 0.8166493470862564 0.9972678094262067 0.8740608792665969 0.8730719538119308 0.9028425533373154 0.8619448057901014 0.8066049123884685 0.8767025795521468 1.0 13.2221436830588 -5.744310007320062 24.996773870094522 0.9000931341054351 0.9907770538355513 0.27192407022119536 0.06185007083283892 327.6455098301615 478122.9323246998 0.010513314899206516 0.040517618139253364 1.801731173162478e-06 5.744310007320062 0.09068391973011614 RPPTPAPWPSSGLGT(ph)PLTPPK ddPTM_A549_PD325901_60min_R1 1 RPPTPAPWPSSGLGTPLTPPK 21 1 M0R1G0;M0QZE8;M0R0K4;M0QYB1;M0R0E3;M0R0S2;M0R0S1;M0R2P6;Q8TBC3 M0R1G0 SHKBP1 SH3KBP1-binding protein 1 1 RPPT(0.004)PAPWPS(0.018)S(0.018)GLGT(0.594)PLT(0.366)PPK 46.403999999999996 0.010617 13659000.0 4037.7 4065.8 4550.2 3926.2 4809.2 5713.2 5373.7 5161.1 5353.2 5059.1 5258.8 True False 4447.604331602362 4408.43923492634 4859.003934575392 4168.712456952845 4471.418382839321 5666.673593405426 5578.199094101469 5058.157811695374 5128.223620254454 4739.6675626085935 4612.000938279819 0.9643546025082178 0.9558626058238827 1.0535565798014994 0.9038836966298816 0.9695180991240361 1.22868006083255 1.2094965219547467 1.0967382442862128 1.1119303072317186 1.027681396000841 1.0 12.17117709115817 -7.100059043694214 23.905054957876885 1.0824788951506286 0.9696626590120953 0.4565496722178177 0.07383553359978483 28.115043756307127 6709.9508214439475 0.012633210827298165 0.021881375730138666 7.942202506549699e-08 7.100059043694214 -0.11281623613853331 RPPVLDES(ph)WIR ddPTM_A549_MK2206_60min_R1 2 RPPVLDESWIR 11 1 O94901-9;E9PHI4;H7C019;O94901-2;O94901-3;O94901-6;O94901-7;O94901-8;O94901;C9JK55;O94901-5 O94901-9 SUN1 SUN domain-containing protein 1 1 RPPVLDES(1)WIR;RPPVLDES(1)WIR 45.864 0.016956 8911200.0 352.43 345.84000000000003 506.02 317.48 499.29 461.28999999999996 434.86 437.89 830.4000000000001 597.38 577.5699999999999 True False 411.9115679137645 363.4417787979263 577.7812449657143 395.262614252219 425.8451024054638 510.1034016204796 513.8684330809859 499.96224848188257 642.315725876312 462.4314431015716 434.143428878929 0.9487914373768758 0.8371467921014658 1.3308533690298974 0.9104424666126807 0.9808857489910797 1.1749651559570968 1.183637477614086 1.1516061633661365 1.479501204325349 1.0651582227000178 1.0 8.76202793739288 -7.381733166650741 3.488014184828949 1.2214261144332705 1.0056745090698924 0.19633138388880622 0.16347041750439006 0.3166709855878443 7.108911601991625 0.030632567607768463 0.05033441923344992 4.152090714298222e-08 7.381733166650741 -0.21575160536337812 RPPVLDES(ph)WIR ddPTM_A549_PD325901_60min_R1 4 RPPVLDESWIR 11 1 O94901-9;E9PHI4;H7C019;O94901-2;O94901-3;O94901-6;O94901-7;O94901-8;O94901;C9JK55;O94901-5 O94901-9 SUN1 SUN domain-containing protein 1 1 RPPVLDES(1)WIR;RPPVLDES(1)WIR;RPPVLDES(1)WIR;RPPVLDES(1)WIR 56.225 0.006839399999999999 14924300.0 2226.62 2930.8500000000004 2358.12 2338.71 2619.8799999999997 2153.48 2871.11 2869.18 2822.5600000000004 3046.6699999999996 3068.12 True False 2452.6648232489906 3177.8430153189706 2518.1562037275103 2483.166805104217 2435.8686668953414 2135.9427728640194 2980.3716621816757 2811.951954071833 2703.9376189168015 2854.302736252045 2690.7606904151285 0.9115135478178089 1.1810203065025064 0.9358529031204967 0.9228493689348182 0.9052713887088701 0.7938062944328534 1.1076316347262625 1.045039777817628 1.0048971016072188 1.060779112174292 1.0 11.393798371625646 RPQHNSSGAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RPQHNSSGASPR 12 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RPQHNS(0.007)S(0.035)GAS(0.958)PR 69.594 0.0014799000000000001 5850800.0 433.77 335.87 659.52 353.22 253.8 452.08 401.0 445.26 326.52 511.01 585.64 True False 506.97977134169486 352.96434838323916 753.0498531279165 439.7589158566484 216.46635620682696 499.9188055335831 473.8565093719251 508.3769685515608 252.56374134529545 395.5724860881414 440.2094251582594 1.1516785928866264 0.8018100663254658 1.7106627211745593 0.9989766023263835 0.49173494213352037 1.135638577828854 1.0764342658078463 1.1548525304036699 0.5737354243483006 0.8986006738631944 1.0 8.78204622433521 -6.517235223649772 24.98318077146104 0.8474232469938787 1.2086586334803429 0.17613515374165045 0.28254130232368807 278.18735043721784 1231498.732739371 0.041903871631413875 0.08943810293845912 3.039238459967999e-07 6.517235223649772 0.36123538648646414 RPQHNSSGAS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RPQHNSSGASPR 12 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RPQHNSSGAS(1)PR 150.05 1.4888e-12 9502800.0 669.89 487.81 697.94 637.55 890.75 520.5 791.01 505.78 810.21 692.04 755.04 True False 737.8967396530469 528.919460669344 745.306405454166 676.9300155188946 828.1867929206776 516.2612205712248 821.1123184072807 495.69182112326587 776.159691281171 648.344476295715 662.1748665929096 1.1143532877497289 0.7987610031029945 1.1255431805936602 1.0222828586078851 1.250707078602892 0.7796448440085704 1.2400233832977572 0.7485814489966232 1.172137044818309 0.9791136888532842 1.0 9.371068442838393 RPQRAT(ph)SNVFAMFDQSQIQEFK ddPTM_A549_PD325901_60min_R1 1 RPQRATSNVFAMFDQSQIQEFK 22 2 J3QRS3;P19105;O14950;P24844;P24844-2;J3KTJ1 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 1 RPQRAT(0.5)S(0.5)NVFAMFDQSQIQEFK 84.524 1.3606e-05 1871200.0 1521.8 1175.1 1393.3 1360.4 1728.5 1465.0 1447.5 1911.3 1614.8 1451.2 1300.2 True False 1676.292015710051 1274.129801013808 1487.8577165935326 1444.428818307434 1607.0961230012824 1453.069525719202 1502.5854046023933 1873.1776221141565 1546.9355716182654 1359.5709843366594 1140.2836426468816 1.4700658266209632 1.117379705681155 1.30481369805485 1.266727649407086 1.4093827736323683 1.274305331913967 1.317729509049625 1.6427295385611653 1.356623487141711 1.1923094688798284 1.0 10.155177020403743 -10.539433121080275 0.9502036404338458 1.0092367971059644 1.34407264354724 0.3094559579023576 0.1368583971968558 0.3491886338445602 0.5861715908898051 0.07423747840557701 0.023347936798665272 2.8877984497495857e-11 10.539433121080275 0.33483584644127573 RPQRPRS(ph)PPLPAVIR ddPTM_A549_MK2206_60min_R1 1 RPQRPRSPPLPAVIR 15 3 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 RPQRPRS(1)PPLPAVIR 90.75399999999999 9.2072e-06 3811000.0 750.92 872.23 975.42 849.82 1090.3 849.56 836.11 682.84 1350.2 1321.8 1344.4 True False 877.6569377686463 916.6227814044511 1113.749223280616 1058.0259381498697 929.9183143116761 939.4598753077125 988.0203642168589 779.6346611097965 1044.3818558263445 1023.2044619700312 1010.5483764475863 0.8684957179921484 0.9070548256449484 1.102123608565693 1.0469819781109173 0.9202115761945493 0.9296535398040285 0.9777071412356122 0.7714966242887566 1.0334803163978097 1.01252397788905 1.0 9.980922671981386 RPQRPRS(ph)PPLPAVIR ddPTM_A549_PD325901_60min_R1 2 RPQRPRSPPLPAVIR 15 3 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 RPQRPRS(1)PPLPAVIR;RPQRPRS(1)PPLPAVIR 123.36 9.748e-08 20338400.0 2027.85 1974.66 2153.0099999999998 2111.94 1985.25 2197.94 1966.48 2366.2 2553.3999999999996 2035.25 2652.8 True False 2233.7158391757307 2141.0715282698716 2299.1262057008826 2242.389737236255 1845.8128887406974 2180.040705364685 2041.3154724991462 2319.00428475201 2446.0894776876885 1906.7439676620613 2326.522417484731 0.9601093126756389 0.9202883721123326 0.9882243938085639 0.9638375802372735 0.793378509860334 0.9370383405639343 0.8774106181646296 0.9967685105132797 1.0513930402322214 0.8195682763820071 1.0 11.183959373084663 -8.43207479894771 5.333741737662826 1.024299900814008 0.920444086033348 0.0 0.0795533845785711 0.1499279393816573 6.828962937322728 0.008536169842322767 0.010303529488252396 3.6976448940937997e-09 8.43207479894771 -0.10385581478065986 RPQS(ph)PGAS(ph)PSQAER ddPTM_A549_MK2206_60min_R1 3 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 2 RPQS(0.996)PGAS(0.911)PS(0.092)QAER;RPQS(1)PGAS(0.811)PS(0.189)QAER;RPQS(1)PGAS(0.5)PS(0.5)QAER 73.984 0.00023694 86416000.0 2529.02 2183.05 1947.96 2310.6 3367.8900000000003 2625.08 2102.7799999999997 2326.14 3410.8599999999997 3641.15 3213.69 True False 2955.856747397408 2294.1579204395484 2224.2100192549965 2876.697103726775 2872.4778424169053 2902.8642232129237 2484.827907174804 2655.8774685049793 2638.3056560241794 2818.6116861114974 2415.6420796681364 1.2236319164482707 0.9497093711642589 0.9207531355640902 1.1908623085924959 1.1891156668423037 1.2016946747391164 1.0286407610171173 1.0994499105885118 1.0921757317568472 1.1668167688562212 1.0 11.238190994233765 -10.482689628230977 0.6997141466077259 0.996313624991215 1.0970925205148667 0.0 0.10794976274293669 1.425639216310478 1.1943541228593075 0.08037440887645265 0.020205281555826227 3.2908673112839374e-11 10.482689628230977 0.10077889552365171 RPQS(ph)PGAS(ph)PSQAER ddPTM_A549_PD325901_60min_R1 1 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 2 RPQS(1)PGAS(0.789)PS(0.211)QAER 57.413999999999994 0.0030081999999999995 37894000.0 905.82 1035.2 796.39 1416.1 1184.1 879.81 1160.0 1017.8 1306.4 952.58 1177.6 True False 997.7781795705605 1122.4399370347166 850.4378144821092 1503.5692808035549 1100.9329009232376 872.6451190600758 1204.1444347763563 997.4991805513463 1251.4965511283767 892.4339362316804 1032.7626654214482 0.9661253383548569 1.0868324104034812 0.8234590995164062 1.4558710642294381 1.066007648982906 0.8449619145594967 1.1659449698299957 0.9658551901121332 1.2117949196175366 0.8641229646576131 1.0 10.012293037645925 -8.740859779535711 24.97548438460914 1.1000143176353219 1.052275040161198 0.0 0.18229884522459525 1089.7452387510918 1322519.1655600872 0.02863402365474278 0.03245032995139483 1.816101932138824e-09 8.740859779535711 -0.047739277474123876 RPQS(ph)PGASPS(ph)QAER ddPTM_A549_PD325901_60min_R1 2 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 2 RPQS(0.999)PGAS(0.284)PS(0.716)QAER;RPQS(0.989)PGAS(0.397)PS(0.614)QAER 60.549 0.011406999999999999 24081000.0 1043.3 965.4100000000001 965.73 861.64 1124.52 1032.54 784.0 840.6600000000001 1242.8 827.43 1276.4499999999998 True False 1149.215047963133 1046.7684888066897 1031.2702452062524 914.8615458735793 1045.5375945833962 1024.1313365775463 813.835549021261 823.8923768149883 1190.5694379534186 775.1859285899131 1119.454742083226 1.0265846440781743 0.9350699491957376 0.9212254916952977 0.8172385282598266 0.9339704011952504 0.9148483615083094 0.7269928103629905 0.7359764944867561 1.0635261910971525 0.6924674124362965 1.0 10.128580487982628 -8.791125754808025 24.999581939097062 1.0299985060154688 0.8761687897230315 0.0 0.132902209952623 155.9109920417283 131295.52105573317 0.01570269614368139 0.016716741850590702 1.6176115723604564e-09 8.791125754808025 -0.15382971629243736 RPQS(ph)PGASPSQAER ddPTM_A549_MK2206_60min_R1 3 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RPQS(0.999)PGASPSQAER;RPQS(0.968)PGAS(0.027)PS(0.005)QAER;RPQS(1)PGASPSQAER 101.38 1.2383e-05 54021000.0 1644.96 1986.1200000000001 2070.34 1978.9 2049.96 2070.44 2222.2 2072.8 3243.9 2998.3 2785.8 True False 1922.5890325892394 2087.2050245955866 2363.945343469264 2463.730588836197 1748.413599565592 2289.5325865531577 2625.944975377288 2366.62574768377 2509.1618294438445 2320.9819475902145 2094.008975831363 0.9181379138195592 0.9967507535477134 1.1289088875709004 1.1765616180599452 0.8349599355807141 1.0933728618064629 1.2540275642012164 1.1301889223011439 1.1982574374819275 1.1083915944862361 1.0 11.0320519109612 -7.499798368129692 24.83801994890231 1.1130189791167626 1.0198255735989223 0.23386026785486957 0.10520629679678276 1200.2658407059998 1291670.3200474447 0.0178657208493816 0.02843822308947979 3.163746166039313e-08 7.499798368129692 -0.09319340551784028 RPQS(ph)PGASPSQAER ddPTM_A549_PD325901_60min_R1 2 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RPQS(1)PGASPSQAER;RPQS(1)PGASPSQAER 109.87 5.1485e-06 71651000.0 2855.4 3213.4 2893.0 3167.0 3023.7 2839.8 2698.8999999999996 2778.4 2974.8 3204.7 2969.3 True False 3145.2781059656204 3484.204495428282 3089.336377022243 3362.618397221143 2811.3257431987117 2816.67361033269 2801.608116394749 2722.9826323873644 2849.779501145661 3002.354695082475 2604.0949239435345 1.2078200671742565 1.3379713862933789 1.18633785144202 1.2912810382998372 1.079578826927459 1.08163246448299 1.0758471554301516 1.0456541377776627 1.0943454767885619 1.1529359653817197 1.0 11.346566322953116 -6.825930671131036 5.332533981973278 1.0519206834653942 1.256723076086363 0.7134917979501771 0.05370497497823864 0.06440111857745136 3.523574066587796 0.007031898243974235 0.013612599226462104 1.4930327317622362e-07 6.825930671131036 0.20480239262096878 RPQS(ph)PSPR ddPTM_A549_MK2206_60min_R1 4 RPQSPSPR 8 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 RPQS(0.741)PS(0.259)PR;RPQS(0.774)PS(0.226)PR;RPQS(0.5)PS(0.5)PR;RPQS(0.936)PS(0.064)PR 103.55 0.0010427 160995000.0 2593.03 2715.0 2728.94 2329.27 3528.03 2744.6299999999997 2454.4300000000003 2497.71 3694.7 4254.26 3445.59 True False 3030.6700705031603 2853.1819032973904 3115.944726763246 2899.941254564905 3009.061460553082 3035.0649248620552 2900.3681603434798 2851.76804141607 2857.856349223518 3293.2197112881086 2589.954909553732 1.1701632562496491 1.1016338133041144 1.2030884071646428 1.1196879311943644 1.1618200183537424 1.1718601407562803 1.119852762549922 1.1010879111819944 1.1034386501021933 1.271535538761775 1.0 11.338711265844385 -10.051033366765955 0.36231600685871035 0.9734125795994909 1.1590437094966708 0.0 0.08519764522848648 0.537052272416935 0.12772222862334423 0.03884715728425716 0.010783321215538889 8.89132803322327e-11 10.051033366765955 0.1856311298971799 RPQS(ph)PSPR ddPTM_A549_PD325901_60min_R1 4 RPQSPSPR 8 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 RPQS(0.856)PS(0.144)PR;RPQS(0.996)PS(0.004)PR;RPQS(0.648)PS(0.352)PR;RPQS(1)PSPR 101.65 0.0010095 192296000.0 4674.71 5315.12 4481.28 4629.13 5487.51 5176.6900000000005 4995.94 5015.65 4976.030000000001 5303.96 5309.8 True False 5149.283117860388 5763.043815815262 4785.406608925763 4915.060846582983 5102.086228481781 5134.532752966099 5186.063230583269 4915.608926048693 4766.90476371045 4969.0670604205225 4656.7282615954555 1.1057727289623245 1.2375735692683019 1.0276327799480016 1.0554751255550006 1.0956375252898567 1.1026051907110725 1.1136710023114933 1.0555928218075885 1.023659637394699 1.0670725842864741 1.0 12.18510098234817 -2.000059943163472 0.10066026199279812 0.9396211362937849 1.5572784386480734 0.22159144003395648 0.053904667089629606 67.58741415601591 0.4665596587421345 0.31434410771073945 5.792558235569354 0.009998619852902688 2.000059943163472 0.6176573023542885 RPQT(ph)PK ddPTM_A549_MK2206_60min_R1 2 RPQTPK 6 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RPQT(1)PK;RPQT(1)PK 75.21300000000001 0.028359 81517000.0 7434.200000000001 5881.7 4284.8 3523.7 8737.8 8092.0 6898.1 8162.5 9289.3 9290.3 10372.400000000001 True False 8688.911211260413 6181.053407228087 4892.449070054728 4387.006658184906 7452.481194893668 8948.290068965132 8151.395479547325 9319.559371607857 7185.2883819639055 7191.614777606426 7796.646816323222 1.1144420692584314 0.7927835584763574 0.6275068225242414 0.5626786439780981 0.9558572256076802 1.1477100707230712 1.0455001581553487 1.1953291704962488 0.9215870041619221 0.9223984293542593 1.0 12.928638067406812 -6.974042571446468 23.813316308462102 1.0019716252080355 0.7644409770795187 0.38416047561220346 0.15257847587330894 115.83399751008244 106264.86554497245 0.022450397729842246 0.04242598381762058 1.0615914902527116e-07 6.974042571446468 -0.23753064812851676 RPQT(ph)PK ddPTM_A549_PD325901_60min_R1 2 RPQTPK 6 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RPQT(1)PK;RPQT(1)PK 89.296 0.023499000000000003 67002000.0 10097.9 9826.5 7596.8 6819.6 8322.0 5502.7 4746.3 6123.1 6802.4 9987.6 11782.2 True False 11123.031374318918 10654.613641104745 8112.364531269465 7240.831203564669 7737.491429341431 5457.8878356143705 4926.923043775017 6000.969967020975 6516.5187839832115 9356.981231505526 10333.06409351952 1.0764504384807632 1.0311185089606565 0.7850879911174858 0.7007438585526461 0.748809003729501 0.52819645617386 0.4768114277801667 0.5807541608867538 0.6306472818716095 0.9055379069383539 1.0 13.33498050374671 -2.16777590074855 15.787761332080787 0.7792219180538933 1.1826052978650443 0.0 0.19989617729451464 0.0 0.0 0.030139756266608565 0.0 0.0067955419728990725 2.16777590074855 0.403383379811151 RPQT(ph)PKEEAQALEDLTGFK ddPTM_A549_MK2206_60min_R1 3 RPQTPKEEAQALEDLTGFK 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RPQT(1)PKEEAQALEDLTGFK;RPQT(1)PKEEAQALEDLTGFK;RPQT(1)PKEEAQALEDLTGFK 191.65 1.8962999999999997e-44 43535600.0 5708.83 5894.85 6276.01 5441.33 8724.9 6725.54 6118.37 6432.1 9306.1 8890.3 10110.9 True False 6672.340936506927 6194.872686059897 7166.042589655099 6774.456094270585 7441.478767805141 7437.232178747867 7229.99863153593 7343.869872480112 7198.283208787993 6881.975055418496 7600.084483356062 0.8779298376378759 0.8151057662091081 0.9428898593625503 0.8913658932484795 0.9791310588851659 0.9785723033783589 0.9513050344860497 0.9662879259517375 0.9471319989339592 0.9055129677163191 1.0 12.891799740460598 -6.198214505394234 1.0274932855030376 0.9730379146673442 0.8428335653994008 0.5173773843043534 0.03618914521605895 0.2865115845590576 0.4909083216707887 0.004720566422394849 0.02825864333370305 6.335567095842521e-07 6.198214505394234 -0.13020434926794344 RPQT(ph)PKEEAQALEDLTGFK ddPTM_A549_PD325901_60min_R1 3 RPQTPKEEAQALEDLTGFK 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RPQT(1)PKEEAQALEDLTGFK;RPQT(1)PKEEAQALEDLTGFK;RPQT(1)PKEEAQALEDLTGFK 100.19 7.7617e-09 8072800.0 2425.92 2222.43 2893.13 2121.4399999999996 2613.17 2784.03 2995.57 2634.85 2738.78 2249.9 2479.2 True False 2672.1976125320857 2409.7219757187636 3089.475199603997 2252.4765306601885 2429.629954147097 2761.357782722204 3109.568055588802 2582.295849750161 2623.6786009640036 2107.840930029665 2174.274116943659 1.229006771367149 1.1082880290669466 1.4209225853945322 1.035967136391458 1.117444178364404 1.27001363866843 1.4301637642450853 1.1876588281242344 1.2066917324353128 0.9694458088810908 1.0 11.086318121175127 -10.391525020697292 0.761400796074178 1.0000324456716645 1.2237258681014478 0.3806012878568572 0.11587036837301068 0.5994268992943067 0.6329913632809968 0.07539335876621699 0.022718033408688658 4.059522747398549e-11 10.391525020697292 0.2236934224297833 RPQT(ph)PKEK ddPTM_A549_PD325901_60min_R1 1 RPQTPKEK 8 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RPQT(1)PKEK 41.163999999999994 0.031675 10521000.0 2227.1 2786.1 2648.4 3096.3 2533.4 2879.7 2773.3 3166.5 2942.4 2963.8 3157.9 True False 2453.1935524956325 3020.8944248188004 2828.1363501229544 3287.5514187924914 2355.4627237555364 2856.24867796149 2878.839449107992 3103.3416734288057 2818.7411604716276 2776.6651621947267 2769.498319577437 0.8857898685672192 1.0907731568075913 1.0211727987451764 1.1870566577177406 0.8505015898023461 1.0313234919735532 1.039480482352211 1.120542898145649 1.01778041912721 1.0025877764816205 1.0 11.435408947793025 -9.14794693095956 4.413103520604364 1.007014392548341 1.0319730887779803 0.010130935146010933 0.09045214789298565 0.8480850603961628 34.30324910406736 0.01575821565829887 0.015339539648762661 7.113004263967135e-10 9.14794693095956 0.02495869622963931 RPQT(ph)PPKIDYLLPGPGPAHS(ph)PQPSKR ddPTM_A549_PD325901_60min_R1 2 RPQTPPKIDYLLPGPGPAHSPQPSKR 26 3 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 2 RPQT(0.989)PPKIDY(0.011)LLPGPGPAHS(0.952)PQPS(0.048)KR;RPQT(0.998)PPKIDY(0.002)LLPGPGPAHS(0.954)PQPS(0.046)KR 76.85300000000001 1.2432e-06 13289500.0 2050.67 1876.35 2649.8 2110.0 2913.8999999999996 3022.8 2921.7 2996.6 3171.3 2802.3999999999996 2747.6000000000004 True False 2258.8525087765365 2034.476599550898 2829.631362541837 2240.3299078423147 2709.237716409275 2998.1833190061443 3032.8868923155846 2936.830462212776 3038.021289492821 2625.4559857394247 2409.6626184714423 0.9374144294977811 0.8442993570782362 1.1742852882603125 0.9297276268756067 1.1243224240777188 1.2442336516420822 1.2586354907391482 1.218772470345139 1.2607662442885779 1.0895533530768178 1.0 11.234615450730951 -5.993530163847703 0.9899482511943725 1.1501173726840788 0.8734828663529552 0.4248688666155428 0.1079597863800606 0.7539981917498885 1.064861949358771 0.02003569226799266 0.16803229429617014 1.015008866860141e-06 5.993530163847703 -0.2766345063311235 RPQYS(ph)NPPVQGEVMEGADNQGAGEQGR ddPTM_A549_MK2206_60min_R1 1 RPQYSNPPVQGEVMEGADNQGAGEQGR 27 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 RPQY(0.004)S(0.996)NPPVQGEVMEGADNQGAGEQGR 55.36600000000001 0.0012682000000000001 8010100.0 665.9 877.12 673.05 642.43 899.39 818.63 628.83 656.7 1039.8 773.24 1075.6 True False 778.2876403080774 921.7616615175723 768.4986105770017 799.8253788397786 767.0909224147291 905.2568832373853 743.0802712926376 749.7892360594038 804.286960219399 598.5645469614972 808.498834950181 0.9626329768997561 1.140090278020463 0.9505253160004317 0.9892721476699012 0.9487842025919512 1.1196761752825115 0.9190863847545624 0.9273844360030589 0.9947904999380222 0.7403406425420269 1.0 9.659101884546256 -5.799985008233282 24.999975769619148 0.9895769790705058 1.0513627891948 0.03827625451159866 0.09860480398771705 197.79905931043356 128288.37096098979 0.007936008025777416 0.02467474348176423 1.5849479036308626e-06 5.799985008233282 0.061785810124294294 RPQYS(ph)NPPVQGEVMEGADNQGAGEQGRPVR ddPTM_A549_MK2206_60min_R1 4 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR 30 2 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 RPQYS(1)NPPVQGEVMEGADNQGAGEQGRPVR;RPQY(0.001)S(0.999)NPPVQGEVMEGADNQGAGEQGRPVR;RPQYS(1)NPPVQGEVMEGADNQGAGEQGRPVR;RPQYS(1)NPPVQGEVMEGADNQGAGEQGRPVR 133.71 3.0410000000000002e-28 72334000.0 5473.66 5923.9 6282.800000000001 5351.650000000001 7647.199999999999 6336.72 5506.9 6058.5599999999995 9225.0 8300.9 8242.1 True False 6397.47998986141 6225.401206977313 7173.795513755567 6662.804490244695 6522.307010184584 7007.267504425689 6507.43244753181 6917.379433561837 7135.552229297906 6425.720924774569 6195.359099612207 1.032624564129278 1.0048491309191403 1.1579305409761647 1.0754508952776842 1.0527730362866041 1.1310510644757144 1.050372116111742 1.1165421281221333 1.1517576486800498 1.037182965742338 1.0 12.59697219192143 -5.680806410144745 24.99999972566085 1.081841353187991 1.0187354802928654 0.22259996310030994 0.047918514004045246 45.30049363051776 14041.797580364931 0.008173952802729603 0.03165758031145999 2.0854202668636234e-06 5.680806410144745 -0.06310587289512548 RPQYS(ph)NPPVQGEVMEGADNQGAGEQGRPVR ddPTM_A549_PD325901_60min_R1 4 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR 30 2 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 RPQYS(1)NPPVQGEVMEGADNQGAGEQGRPVR;RPQYS(1)NPPVQGEVMEGADNQGAGEQGRPVR;RPQYS(1)NPPVQGEVMEGADNQGAGEQGRPVR;RPQYS(1)NPPVQGEVMEGADNQGAGEQGRPVR 182.96 3.471199999999999e-67 104258000.0 8120.8 8454.599999999999 9790.9 8664.5 10079.0 8628.3 8419.4 10789.2 10642.1 10621.5 11314.4 True False 8945.217637783011 9167.098813421278 10455.369351464597 9199.686486492768 9371.08581066238 8558.033985503751 8739.804874272464 10574.000942036333 10194.849545899642 9950.856677323467 9922.800527890997 0.9014811506731193 0.9238418919794273 1.0536712213529493 0.9271260125238132 0.9443992937600774 0.8624615562359476 0.88078006301816 1.065626675888016 1.0274165561671798 1.0028274426512567 1.0 13.276531636876587 -8.261977736527568 24.999803217220585 1.0172594507482444 0.9304916751031493 0.47033220575051216 0.048907940849264794 38.03890462733461 1766416.9009843227 0.00825885562037719 0.010293841066537648 5.47044005587302e-09 8.261977736527568 -0.08676777564509508 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR ddPTM_A549_MK2206_60min_R1 2 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR 30 2 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 60.093 0.00041765 8383300.0 1511.91 1466.48 1233.82 1300.28 1809.37 1533.15 1181.3200000000002 1178.69 1741.45 2118.6 2217.3 False True 1767.08344534943 1541.117568157481 1408.7942288122965 1618.848658371788 1543.214069857945 1695.3869153773962 1395.9505527462422 1345.772917086735 1347.0143555242098 1640.0067885683964 1666.6832156331677 1.0602395396884827 0.9246613595805698 0.8452681442988552 0.9712995506208373 0.9259192481107953 1.0172220488422714 0.8375620151763064 0.807455732717318 0.8082005883838479 0.9839943026877864 1.0 10.702764203824316 -7.768717206964715 24.99002973303205 0.8929572688508471 0.9500444542820361 0.16202122443472455 0.07782305857885549 351.43398410178537 1206725.2683228375 0.01444459235783867 0.020174392500284976 1.7032672384035916e-08 7.768717206964715 0.05708718543118896 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR ddPTM_A549_PD325901_60min_R1 2 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR 30 2 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 143.07 3.4545e-36 31726000.0 3737.2999999999997 3488.7 3403.9 3766.5 4150.1 3892.7 3451.6 4194.0 4006.8 4131.1 4364.9 False True 4116.707944745155 3782.7049925937163 3634.9091233135173 3999.1481506578552 3858.611293067758 3860.999141820573 3582.9525267879903 4110.347379870646 3838.4081300223324 3870.2616409820635 3828.04497138084 1.0754074143648813 0.9881558395666473 0.9495471318881462 1.0446972751250871 1.0079848387141315 1.008608616326638 0.9359745127277226 1.0737458443148789 1.0027071674233112 1.0110282585280066 1.0 11.902392063181694 -8.977473490311784 24.998307158971933 1.0011943074706984 1.0082432857148038 0.00018317063932404842 0.04188767604168128 1130.5394933183052 1254609.192127572 0.006978340419343436 0.00716648213553708 1.0532379756698024e-09 8.977473490311784 0.007048978244105442 RPRDDEEEEQK ddPTM_A549_MK2206_60min_R1 2 RPRDDEEEEQK 11 2 A0A087WUB9;Q8WYA6 A0A087WUB9 CTNNBL1 Beta-catenin-like protein 1 0 ; 94.616 9.5655e-05 3860700.0 714.09 949.03 625.58 716.49 560.21 403.95000000000005 384.88 380.51 508.3 1318.21 1278.31 False True 834.6109341756945 997.3315733651286 714.2966507759609 892.0300821644578 477.8038511056996 446.6957208796913 454.8077140325848 434.4484577630026 393.1708615883062 1020.4254454633948 960.8703474387925 0.8685989076469647 1.0379460413400454 0.7433850494813626 0.9283563433320333 0.49726152168113996 0.46488657087853974 0.4733289098210579 0.4521405608165851 0.4091820115339247 1.0619803683018703 1.0 9.908197967572898 -6.744892728329961 24.909331662700037 0.6426631689107031 0.8940136539490583 0.262436818920635 0.21762770759237987 325.9701840953457 490712.69751912635 0.03675364194819237 0.07633716902922767 1.7993152949885284e-07 6.744892728329961 0.2513504850383552 RPRDS(ph)PTLSNSGIR ddPTM_A549_MK2206_60min_R1 2 RPRDSPTLSNSGIR 14 2 Q9HD20-3;Q9HD20-2;Q9HD20 Q9HD20-3 ATP13A1 Manganese-transporting ATPase 13A1 1 RPRDS(0.997)PT(0.003)LS(0.001)NSGIR;RPRDS(0.992)PT(0.003)LS(0.002)NS(0.003)GIR 72.21 0.00050136 45643000.0 6182.9 6870.3 5887.799999999999 5683.5 9341.1 7283.5 6228.1 6227.1 9506.3 9473.099999999999 10664.4 True False 7226.422362608215 7219.968924576082 6722.778574185083 7075.957755142013 7967.036564080341 8054.235135603991 7359.665152167798 7109.810494693945 7353.138228441698 7333.120130646317 8016.135157533202 0.9014845958300927 0.9006795397893311 0.8386558412587791 0.8827143774506282 0.993875029239406 1.0047529111376052 0.9181064200559937 0.8869374523971775 0.9172921967928086 0.9147949712094091 1.0 12.968691118227524 -14.999999999999996 0.15567912380645732 1.3102089281983518 0.889886268991926 0.017916509027176453 0.05066769332842393 56.0701713071214 0.568096158877555 5.360058278503675 0.08487289178331268 1.0000000000000082e-15 14.999999999999996 -0.42032265920642575 RPRDS(ph)PTLSNSGIR ddPTM_A549_PD325901_60min_R1 2 RPRDSPTLSNSGIR 14 2 Q9HD20-3;Q9HD20-2;Q9HD20 Q9HD20-3 ATP13A1 Manganese-transporting ATPase 13A1 1 RPRDS(0.992)PT(0.007)LS(0.001)NSGIR;RPRDS(0.998)PT(0.001)LSNSGIR 62.739 0.0019496 65529000.0 11363.9 11074.9 11825.599999999999 11479.9 13377.2 12928.599999999999 11648.1 12248.7 12307.099999999999 13226.8 14537.4 True False 12517.554762338976 12008.22069036493 12628.156329109646 12188.987350255451 12437.631620834683 12823.313768063672 12091.374819584897 12004.39006958074 11789.875386093103 12391.657590700182 12749.391960171326 0.9818158231736382 0.9418661476467434 0.990490869569277 0.956044601054971 0.9755470425326501 1.00579806536055 0.948388351174546 0.9415656924723982 0.9247402090173618 0.971941064280658 1.0 13.638140823734515 RPRPPNAPS(ph)QDGK ddPTM_A549_MK2206_60min_R1 1 RPRPPNAPSQDGK 13 2 P16989-2;P16989 P16989-2 YBX3 Y-box-binding protein 3 1 RPRPPNAPS(1)QDGK 42.382 0.027699 9634400.0 2075.0 2259.7 2250.7 1828.9 1576.6 1159.8 1569.4 1191.1 2164.0 3144.1 2873.5 True False 2425.209271120679 2374.709078040926 2569.88310352226 2276.9805821024415 1344.6842285093903 1282.529266187068 1854.5396653573548 1359.9420725907646 1673.8574551979045 2433.845626327717 2159.930645434497 1.1228181220757754 1.0994376523433345 1.189798898846262 1.0541915255081713 0.6225589841746472 0.5937826146862559 0.8586107471910475 0.6296230276955005 0.7749588898773123 1.1268165630559488 1.0 11.076769273396154 -6.574270764925514 8.9837223868275 0.8298013700912267 1.1317141664113268 0.4889663641313978 0.1549963741864024 0.2161960102192189 35.32878962129626 0.0224980298275118 0.04693875208901098 2.6651965049337e-07 6.574270764925514 0.30191279632010015 RPRPPNAPS(ph)QDGK ddPTM_A549_PD325901_60min_R1 1 RPRPPNAPSQDGK 13 2 P16989-2;P16989 P16989-2 YBX3 Y-box-binding protein 3 1 RPRPPNAPS(1)QDGK 50.188 0.0094541 21997000.0 1954.0 1940.8 2344.4 2143.5 1831.9 1975.2 2337.7 1999.7 2501.2 3983.7 4045.6 True False 2152.3686415412267 2104.3580272381923 2503.5050820224474 2275.8991267582946 1703.2336637119174 1959.114626075474 2426.662452738523 1959.8144147656967 2396.0832621572963 3732.168502137507 3548.016847171375 0.6066399158327513 0.593108239865285 0.7056068755756739 0.6414566854643701 0.4800523044499649 0.5521717371881593 0.6839489656519411 0.5523689709444703 0.6753302944622578 1.0519027002684458 1.0 11.792797144716197 -10.251730509036426 0.5941221060620727 1.018494266049335 0.5978301301121043 0.8547350942505008 0.06582191733426498 0.2559155515625182 0.16157375724581916 0.05338243976762975 0.015020615591420062 5.6010505336109025e-11 10.251730509036426 -0.42066413593723073 RPRPPNAPS(ph)QDGKEAK ddPTM_A549_PD325901_60min_R1 1 RPRPPNAPSQDGKEAK 16 3 P16989-2;P16989 P16989-2 YBX3 Y-box-binding protein 3 1 RPRPPNAPS(1)QDGKEAK 51.566 0.0033244999999999998 3585700.0 655.01 824.04 567.43 627.55 536.91 868.7 524.33 703.96 551.25 616.15 865.88 True False 721.5061330071235 893.484742768631 605.9392120337816 666.3123382305421 499.19929383894595 861.6255952165673 544.2836650743855 689.9189655540633 528.0828795235129 577.2461838471834 759.3822492655601 0.9501224629689874 1.1765941903866843 0.7979370239689147 0.8774399702850166 0.6573755105834365 1.1346401579045235 0.7167453092310122 0.9085265901610441 0.6954111450909612 0.7601523269808711 1.0 9.568682465798025 -5.7714976106005516 24.99821726295466 0.8515020246630515 1.063358344035219 0.266548086639518 0.14244968466753782 191.31037509413952 475477.70576901344 0.020244475106714697 0.06400442585470824 1.6923975556361463e-06 5.7714976106005516 0.21185631937216753 RPRPS(ph)PARPK ddPTM_A549_MK2206_60min_R1 1 RPRPSPARPK 10 3 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 RPRPS(1)PARPK 45.257 0.014122 13608000.0 1553.2 1564.7 959.31 822.99 1715.2 1349.0 1080.0 782.97 1630.7 2144.9 1944.0 True False 1815.342187905851 1644.33654662594 1095.3545830363612 1024.6225869454252 1462.8963521117012 1491.7502846062732 1276.2220202535652 893.9583952450605 1261.3490536928014 1660.365600302255 1461.251148329445 1.2423204525664295 1.125293587283613 0.7496004942672655 0.7011954023898018 1.0011258870757003 1.020871933145576 0.8733762308502466 0.6117760087080623 0.8631979897054802 1.1362629909310558 1.0 10.512988443166526 -5.594241402060418 5.772935948676976 0.8939841855868269 1.2153176856423036 0.389647695971989 0.14700171372646206 0.13029711801991067 7.525017246192819 0.019122001366182202 0.07790490526913413 2.5454149934531384e-06 5.594241402060418 0.3213335000554767 RPRPS(ph)TPAEEDEDDPEQEK ddPTM_A549_MK2206_60min_R1 3 RPRPSTPAEEDEDDPEQEK 19 2 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 RPRPS(0.5)T(0.5)PAEEDEDDPEQEK;RPRPS(0.5)T(0.5)PAEEDEDDPEQEK;RPRPS(0.5)T(0.5)PAEEDEDDPEQEK 122.01 5.8441000000000004e-15 36875300.0 2932.1 2993.6499999999996 2505.76 1968.35 3100.59 2962.79 3090.2 2680.86 3998.81 3787.56 3807.8999999999996 True False 3426.9667970375654 3146.013998087011 2861.1144468307357 2450.595838362588 2644.4973183267375 3276.3104712591676 3651.6493398033 3060.880114789422 3093.0859197873965 2931.9475654253374 2862.2933373064284 1.1972800804066173 1.0991235444259457 0.9995881307969636 0.8561651618379303 0.9239085609636891 1.1446452495125294 1.2757774656456762 1.0693803024639936 1.0806320510455285 1.0243351117130635 1.0 11.482955816472046 -5.400183469003867 3.3106364690421755 1.0422689784005608 1.1991183947560808 0.16110360037459526 0.10450142384783156 0.40920713275469933 7.272119173235526 0.0153612994411194 0.13020599951595876 3.979390245070315e-06 5.400183469003867 0.15684941635552008 RPRPS(ph)TPAEEDEDDPEQEK ddPTM_A549_PD325901_60min_R1 2 RPRPSTPAEEDEDDPEQEK 19 2 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 RPRPS(0.5)T(0.5)PAEEDEDDPEQEK;RPRPS(0.5)T(0.5)PAEEDEDDPEQEK 167.73 1.1738e-34 44690000.0 4778.3 4962.9 5787.6 4781.2 5637.4 4548.7 4039.2 4991.7 4931.200000000001 5745.7 5741.700000000001 True False 5263.389498401456 5381.141000299062 6180.381339666065 5076.5238651069585 5241.448471974209 4511.656895316678 4192.913966335048 4892.136627587107 4723.958812709924 5382.915521432705 5035.507299635128 1.0452550627387314 1.0686393008881108 1.22736021852533 1.0081454683770992 1.040897800377333 0.8959686932920525 0.83266962330466 0.9715280579459372 0.9381296722680198 1.0689917025485693 1.0 12.297921413797868 -6.741322157879095 2.1843315599340927 0.9552665187821958 1.1065606274245072 0.42724484089292813 0.07483154463970328 0.20145721449099713 1.9581400135476446 0.01020558287182147 0.023343622346036833 1.814169420024077e-07 6.741322157879095 0.1512941086423114 RPRS(ph)ES(ph)S(ph)CSKDVVR ddPTM_A549_MK2206_60min_R1 1 RPRSESSCSKDVVR 14 3 E7ETV1;Q9BWF2 E7ETV1 TRAIP E3 ubiquitin-protein ligase TRAIP 3 RPRS(0.987)ES(0.689)S(0.689)CS(0.634)KDVVR 41.912 0.036194 62955000.0 2399.7 3480.8 4058.3 3928.5 4775.0 2878.0 4423.3 3451.2 5470.4 4102.8 5698.8 True False 2804.7106929678525 3657.957852301127 4633.827964199756 4890.982676357068 4072.60382540425 3182.5480497382155 5226.9563538774 3940.4181688567282 4231.363134433737 3175.9746304816504 4283.630681121318 0.6547508181152696 0.8539386619911851 1.0817524453314373 1.141784397500105 0.9507364496554059 0.7429557510091243 1.2202163872141165 0.9198781272677906 0.9877983069553748 0.7414212071266334 1.0 12.064618386252876 -5.442011423141342 3.2205563937110835 0.9985636710278654 0.65701199889477 0.3015050034339385 0.14088721717726901 0.17928608770647755 3.194269877465019 0.014961476888288415 0.11814042819834956 3.614003566895694e-06 5.442011423141342 -0.34155167213309534 RPRS(ph)PGSNSK ddPTM_A549_MK2206_60min_R1 2 RPRSPGSNSK 10 2 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 RPRS(0.988)PGS(0.011)NS(0.001)K;RPRS(0.999)PGS(0.001)NSK 70.332 0.00065053 121239000.0 4046.8 3938.2 3062.6099999999997 2728.08 2725.8999999999996 2233.2400000000002 2552.56 2032.83 3604.1000000000004 7865.5 6914.9 True False 4729.800905239117 4138.637558587767 3496.9341501214317 3396.4597224681647 2324.9237209778935 2469.5599744952647 3016.327111128185 2320.98987778078 2787.7771045650484 6088.678087173003 5197.739488468768 0.9099726748006942 0.7962379737902162 0.6727798031970266 0.6534493946846011 0.44729516093212396 0.47512192174579077 0.5803151769764402 0.446538323617395 0.536344137821789 1.1714088596938708 1.0 12.343668612178897 -10.733653199155222 0.9997680483311872 0.9987639206569657 0.6050309052348283 0.5779444500891295 0.15023502831602212 0.368994539170842 0.6585032365793808 0.1016789757601083 0.026541782562733405 1.8464893233487943e-11 10.733653199155222 -0.39373301542213746 RPRS(ph)PGSNSK ddPTM_A549_PD325901_60min_R1 3 RPRSPGSNSK 10 2 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 RPRS(1)PGSNSK;RPRS(1)PGSNSK;RPRS(1)PGSNSK 139.05 4.6768e-08 279586000.0 11073.599999999999 11342.8 9148.2 9936.4 9269.2 11821.599999999999 7786.700000000001 9863.7 9555.9 11963.099999999999 16674.199999999997 True False 12197.783720046531 12298.697563560057 9769.051864595536 10550.14886079828 8618.163369004033 11725.328809038994 8083.027129545731 9666.960765577038 9154.298754537396 11207.747824364578 14623.37910646255 0.8341289404619163 0.8410297971502948 0.6680433977313952 0.7214576592721872 0.5893414447003829 0.801820750434979 0.5527468768127318 0.6610620360177144 0.6260043378408902 0.7664266748997507 1.0 13.83598910102062 -10.79645094246359 1.0150182863989126 1.002092968144579 0.6942855199774022 0.1937199887519614 0.11265520810748915 0.2993794509768039 0.5415708392603676 0.06661486215414264 0.01622519438194411 1.597898016069555e-11 10.79645094246359 -0.30780744816717676 RPRS(ph)PPPR ddPTM_A549_PD325901_60min_R1 1 RPRSPPPR 8 2 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 RPRS(1)PPPR 52.79 0.0086644 22463000.0 1366.7 1390.9 997.18 1300.5 1333.5 1097.6 1421.8 922.74 1485.4 1575.6 1180.0 True False 1505.4463778886372 1508.1160243639745 1064.8546313304657 1380.8289313502034 1239.8395603252575 1088.6615095081197 1475.9073770388122 904.3352268244738 1422.973803617643 1476.1163471064217 1034.8674806363022 1.4547238231536597 1.4573035220284332 1.0289768025909227 1.334305074985236 1.198066016687398 1.0519815627395515 1.4261800710283512 0.8738657303913262 1.375029972671195 1.4263820003299472 1.0 10.015230320725479 -11.025201693022995 1.2504859713745833 0.9969133114360684 1.2500108209446659 0.0 0.22225198140658914 0.6057460023475139 1.652509816670306 0.13345109165817007 0.02853151118250088 9.436225417179566e-12 11.025201693022995 0.25309750950859744 RPS(ph)ASSPNNNTAAK ddPTM_A549_MK2206_60min_R1 2 RPSASSPNNNTAAK 14 1 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.778)AS(0.179)S(0.043)PNNNTAAK;RPS(0.773)AS(0.113)S(0.113)PNNNT(0.001)AAK 71.601 0.00075733 11617800.0 1151.26 1386.54 1116.84 999.98 1272.33 946.26 1424.3999999999999 1235.4 1362.67 1517.31 1683.29 True False 1345.5645423953702 1457.1089636088275 1275.2247057972193 1244.9751448908073 1085.1719424453588 1046.3926051234473 1683.1950422677564 1410.521733253826 1054.0274207368432 1174.5486171824384 1265.2826365593987 1.063449780717988 1.1516074918810628 1.0078575876650417 0.9839502328714379 0.8576518092401842 0.8270030544075394 1.3302917416497233 1.1147878683369643 0.8330371335869998 0.928289524604805 1.0 10.305243972203856 -3.4647423944386313 0.36360610692748574 0.9456370180847643 1.7168787897081903 0.028103266815446615 0.14315246384123625 35.4549292883901 1.1496615955846334 0.03980560199314653 15.934794324298984 0.0003429711625610197 3.4647423944386313 0.771241771623426 RPS(ph)ASSPNNNTAAK ddPTM_A549_PD325901_60min_R1 6 RPSASSPNNNTAAK 14 1 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.374)AS(0.374)S(0.252)PNNNTAAK;RPS(0.907)AS(0.085)S(0.008)PNNNTAAK;RPS(0.333)AS(0.333)S(0.333)PNNNTAAK;RPS(0.333)AS(0.333)S(0.333)PNNNTAAK;RPS(0.694)AS(0.193)S(0.113)PNNNTAAK;RPS(0.374)AS(0.374)S(0.252)PNNNTAAK 88.992 3.109e-05 171256300.0 9649.500000000002 10544.99 11334.4 9527.6 11909.2 10128.900000000001 10598.900000000001 10785.0 11193.1 11802.800000000001 13362.300000000001 True False 10629.11013641355 11433.653314945626 12103.620543284102 10116.098213250447 11072.738876509611 10046.413596626093 11002.246939440627 10569.884714331178 10722.692932053753 11057.569193721556 11718.821810598693 0.9070118402858904 0.97566577082048 1.0328359573090693 0.8632350910994554 0.944867927464794 0.8572887069193214 0.9388526523622039 0.9019579685708339 0.9149975232455515 0.9435734557991923 1.0 13.516539910619384 -10.726361646470345 0.9780730781444006 1.0000492417781406 0.9269270531355542 0.07325062097064583 0.04951330528065385 0.6310920547053103 1.0716496461547884 0.03195217121552571 0.00824057455688032 1.8777525201766e-11 10.726361646470345 -0.07312218864258635 RPS(ph)DSGPPAER ddPTM_A549_MK2206_60min_R1 1 RPSDSGPPAER 11 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 RPS(0.939)DS(0.061)GPPAER 112.24 2.114e-05 78559000.0 1147.5 1015.4 992.13 1100.0 1234.1 1130.0 975.25 839.84 1329.9 1217.6 1279.6 True False 1341.1699463185453 1067.079522875938 1132.8289525470025 1369.5000493808761 1052.5655248023847 1249.5758499667068 1152.4403011595273 958.8898919021314 1028.6797734139059 942.5433143400744 961.8400048366046 1.3943794597588821 1.1094147857337366 1.1777727551885775 1.4238335299991227 1.0943249599824998 1.2991514635315902 1.198162163524589 0.9969328444235646 1.069491566415618 0.979937733511294 1.0 9.909653121789058 -8.163522178029604 4.4967070457173595 1.031128562618838 1.2413269090900616 0.5521883446696494 0.09993695089837819 0.1342022636001789 4.6303818882387 0.014846454523611833 0.019286499009176394 6.862428332908951e-09 8.163522178029604 0.2101983464712236 RPS(ph)DSGPPAER ddPTM_A549_PD325901_60min_R1 1 RPSDSGPPAER 11 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 RPS(0.723)DS(0.277)GPPAER 81.40899999999999 0.00032962 75190000.0 1061.4 1359.2 1131.0 1330.5 1543.6 1497.1 1228.4 1574.0 1892.1 2580.6 2396.1 True False 1169.1525466386174 1473.744554112815 1207.7564612554972 1412.6819632152603 1435.1828611309095 1484.9081139619223 1275.1474342062731 1542.6053352208878 1812.58161695499 2417.6604755920494 2101.394890129357 0.5563697485562302 0.7013172826465256 0.5747403626650822 0.6722591597851933 0.6829667607322311 0.706629734818911 0.6068100004410775 0.7340863644747554 0.8625611613833379 1.1505026908308622 1.0 11.037131580656354 -8.943350555961132 0.7055108411932574 0.9775659045289127 0.6327810162271892 0.8232676392155996 0.07383629841091408 0.1337722127468935 0.14296991929848177 0.015252228182772904 0.013777300838090048 1.1393297664793297e-09 8.943350555961132 -0.3447848883017235 RPS(ph)DSSRPK ddPTM_A549_MK2206_60min_R1 2 RPSDSSRPK 9 2 G3V4X8;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 1 RPS(0.997)DS(0.001)S(0.001)RPK;RPS(0.994)DS(0.005)S(0.001)RPK 66.498 0.0010970999999999997 29773000.0 2078.39 2091.22 1517.62 1195.44 1881.87 1412.47 1368.77 1730.89 2040.8 2491.98 2642.7 True False 2429.171420243138 2197.6541656771888 1732.841336280913 1488.3228536653405 1605.0494158981157 1561.9366378782972 1617.4577913541393 1976.2489581283098 1578.5620584879302 1929.0399872447258 1986.444655190445 1.2228739491411844 1.1063253939317501 0.8723330558206674 0.7492395268987001 0.8080010745349641 0.7862975863923835 0.8142475991605564 0.994867364144531 0.7946670219898927 0.9711018035182986 1.0 10.955972883376509 -5.646469165430508 3.3963397062209797 0.8752204003371122 1.2025384156889787 0.6575204869039867 0.0845872750573107 0.12611037040511477 2.723278119658397 0.013819933730364511 0.06679482457307072 2.256996234781076e-06 5.646469165430508 0.32731801535186644 RPS(ph)DSSRPK ddPTM_A549_PD325901_60min_R1 4 RPSDSSRPK 9 2 G3V4X8;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 1 RPS(0.999)DSSRPK;RPS(0.999)DS(0.001)S(0.001)RPK;RPS(0.977)DS(0.012)S(0.012)RPK;RPS(0.983)DS(0.012)S(0.005)RPK 78.903 0.00058954 147240000.0 10597.599999999999 11498.300000000001 11002.800000000001 10749.0 12092.2 8871.8 9352.6 9538.0 10841.9 12483.4 13447.0 True False 11673.460550459215 12467.302094287363 11749.516173211317 11412.94131724978 11242.885587825342 8799.551002235916 9708.5183109391 9347.757107583748 10386.252646722849 11695.195993569629 11793.104247556224 0.9898547749103632 1.0571688193861972 0.9963039354668691 0.9677639642348433 0.9533440349393248 0.7461607069283192 0.8232368770038564 0.7926460168043369 0.8807055740964128 0.9916978386749287 1.0 13.525655902199405 -6.596358253623309 2.20816867430204 0.9066049984525546 1.0177944118710784 0.34341456260623304 0.07773337079459008 0.3762117194656013 3.685306237703862 0.013618515085504388 0.03365908757990227 2.533038241236665e-07 6.596358253623309 0.11118941341852384 RPS(ph)EEDFR ddPTM_A549_PD325901_60min_R1 1 RPSEEDFR 8 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPS(1)EEDFR 78.488 0.0017866 7784400.0 536.52 725.7 446.89 541.61 695.27 591.29 572.59 373.47 580.75 422.62 761.69 True False 590.9871154348515 786.8572858443715 477.2186427678777 575.0640196144439 646.4366337512878 586.4747302815745 594.3802257832704 366.0208478684526 556.3430971125263 395.93570107521964 668.0069587507331 0.884702034451977 1.1779177979162152 0.7143917237933324 0.860865312975024 0.9677094306924813 0.8779470372260262 0.8897814880474373 0.5479296930573344 0.8328402718333444 0.5927119409289913 1.0 9.383719321370583 RPS(ph)EGNEPSTK ddPTM_A549_MK2206_60min_R1 4 RPSEGNEPSTK 11 1 A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3;F2Z329 A0A087WWU1 TMEM237 Transmembrane protein 237 1 RPS(1)EGNEPSTK;RPS(1)EGNEPSTK;RPS(1)EGNEPSTK;RPS(1)EGNEPSTK 92.039 0.00023668 266947000.0 20669.0 20830.300000000003 18904.8 16586.9 17939.2 15210.5 13724.8 13119.500000000002 19618.0 25079.100000000002 26418.1 True False 24157.42189146667 21890.47329659507 21585.78490934715 20650.69124461425 15300.367443914538 16820.065014087246 16218.418503311228 14979.229301783691 15174.554323508532 19413.713891808602 19857.756667531954 1.2165232103465544 1.1023638602837083 1.0870203150711668 1.039930722808119 0.7704982843772636 0.8470274510709748 0.8167296424690732 0.7543263598488541 0.7641625676841632 0.977638824809986 1.0 14.277415030238972 -6.57670166698751 4.129966710998985 0.8605339563042278 1.1246329747899346 0.7074390506722188 0.08272234303798856 0.11912547189227177 4.22837851501597 0.01500910965456648 0.0329358787213905 2.650320116770297e-07 6.57670166698751 0.2640990184857068 RPS(ph)EGNEPSTK ddPTM_A549_PD325901_60min_R1 4 RPSEGNEPSTK 11 1 A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3;F2Z329 A0A087WWU1 TMEM237 Transmembrane protein 237 1 RPS(1)EGNEPSTK;RPS(1)EGNEPSTK;RPS(1)EGNEPSTK;RPS(1)EGNEPSTK 99.238 0.00011457 252950000.0 20303.6 19303.9 17555.5 18697.2 23587.5 20203.8 19907.3 22888.7 25583.6 30415.399999999998 33015.6 True False 22364.806525279662 20930.70740004293 18746.92179979743 19852.083579577873 21930.795372457458 20039.26695134854 20664.883195192553 22432.166922662218 24508.41026136552 28494.966453275363 28954.890503132112 0.772401695763982 0.722872959846932 0.647452691895676 0.6856210897233554 0.7574124782162501 0.6920857445197678 0.7136923274828889 0.7747280867885058 0.8464342235628345 0.9841158421991961 1.0 14.821519420639351 -9.315290711675724 0.5750005962686751 0.9887649541318358 0.7010433081640223 0.894798807770335 0.03618552522185908 0.15448441817218825 0.11585704654951298 0.016975407331414262 0.01096467413098481 4.838483766817057e-10 9.315290711675724 -0.2877216459678136 RPS(ph)EGPQPLVR ddPTM_A549_MK2206_60min_R1 2 RPSEGPQPLVR 11 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 RPS(1)EGPQPLVR;RPS(1)EGPQPLVR 77.42 0.0004781000000000001 21156000.0 1642.71 2171.87 1379.34 1266.54 1585.7800000000002 1630.49 1600.5300000000002 1289.78 2403.9 2463.7 2921.4 True False 1919.9592875964593 2282.408906193188 1574.9511529801364 1576.842356857142 1352.513862670064 1803.0273695683338 1891.3255834041086 1472.6102647855907 1859.4204882394822 1907.1484588860376 2195.935753461751 0.8743239799114192 1.0393787261740777 0.7172118539885912 0.7180730831361308 0.6159168639327964 0.8210747362376051 0.8612845710183259 0.670607171664342 0.846755414090884 0.8684900985284023 1.0 11.100620130663668 -9.948652145485312 0.8225010126065437 0.9864201925707866 0.7913944433966296 0.1503631320096911 0.1156488734241271 0.5101449227858202 0.7040107848515161 0.049030990631908786 0.023740849015479935 1.1255061036009093e-10 9.948652145485312 -0.19502574917415705 RPS(ph)EGPQPLVR ddPTM_A549_PD325901_60min_R1 2 RPSEGPQPLVR 11 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 RPS(1)EGPQPLVR;RPS(1)EGPQPLVR 136.33 1.6363000000000002e-08 25187000.0 3258.6000000000004 3392.4 2760.7 2730.1 2799.9 2995.6 2695.4 2748.0 2947.8 3345.2 3557.0 True False 3589.4106731454704 3678.289453628837 2948.057703437714 2898.7320764930337 2603.2446831306274 2971.2048267880164 2797.974921979476 2693.188984235703 2823.9142172506317 3133.983501104596 3119.5115496807825 1.150632275592239 1.179123524644502 0.9450382396370312 0.9292262683847601 0.834503941297161 0.952458351081296 0.8969272520455297 0.8633367568430049 0.9052424305143544 1.0046391722528787 1.0 11.607104435538124 -5.7719581615886355 9.421498374617398 0.9338588400906069 1.1651231171920715 0.7730414490411721 0.04982402024469517 0.05572129550298219 41.92952249655936 0.007671928370998016 0.025360083394282248 1.690603790654509e-06 5.7719581615886355 0.23126427710146458 RPS(ph)ES(ph)DKEDELDKVK ddPTM_A549_MK2206_60min_R1 2 RPSESDKEDELDKVK 15 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 2 RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK 61.138999999999996 0.0017896000000000001 90077700.0 18430.2 19403.5 17660.8 16378.1 26646.0 22047.9 19531.8 21620.4 31593.7 29913.9 28528.5 True False 21540.76718487149 20391.055270950623 20165.36700345935 20390.735235240838 22726.40869774276 24380.994143788463 23080.475236285718 24685.157909698093 24437.777394771736 23156.329213894183 21444.086103455043 1.0045085195494001 0.9508941147025726 0.9403696154815537 0.9508791905081704 1.0597984259203805 1.1369565495197405 1.0763095766793727 1.1511405890932722 1.139604517388799 1.079846867904679 1.0 14.388292212561481 -6.817306781015017 5.007663383045381 1.08040950593041 0.9591586435206 0.6708020494811552 0.04356238229289774 0.13579100632235452 7.017973870788103 0.008784443075637168 0.01714420102469898 1.522976559250128e-07 6.817306781015017 -0.12125086240980998 RPS(ph)ES(ph)DKEDELDKVK ddPTM_A549_PD325901_60min_R1 4 RPSESDKEDELDKVK 15 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 2 RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK 84.975 4.7596e-05 509283800.0 50724.0 55766.7 56663.4 55261.8 59216.5 57203.9 56116.9 62627.9 61807.299999999996 67743.5 72537.5 True False 55873.46313896477 60466.35552225065 60508.919068704505 58675.19587734615 55057.33732583477 56738.050404292604 58252.45933784594 61378.73740386289 59209.754121675476 63466.163848822034 63615.84735309801 0.8782947247222952 0.9504920242063869 0.9511610956441626 0.9223361523689386 0.8654657544721606 0.8918854776761773 0.9156910072189601 0.9648340776344909 0.9307390624388505 0.9976470720660976 1.0 15.957098579804352 -10.36208637586995 0.44024169273161085 1.0133437265262293 0.9134635065061005 0.5593178907157438 0.028289925725860924 0.9801374316873351 0.2980896011873611 0.042669691746443986 0.008884814591194327 4.3442381398636876e-11 10.36208637586995 -0.09988022002012875 RPS(ph)ESDKEDELDK ddPTM_A549_MK2206_60min_R1 2 RPSESDKEDELDK 13 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RPS(0.974)ES(0.026)DKEDELDK;RPS(0.996)ES(0.004)DKEDELDK 95.094 3.5034000000000004e-05 33449000.0 3516.3999999999996 3921.6 3784.7 3342.2 4542.7 4802.0 3911.7 4173.1 4990.700000000001 4645.1 4476.6 True False 4109.882352274102 4121.1926894921 4321.427370107388 4161.03915003706 3874.4748476782997 5310.14445269038 4622.405256135063 4764.649704582757 3860.3144185102515 3595.76868383794 3364.9366721253073 1.2213847548216366 1.2247459881285487 1.2842522136911294 1.236587655425007 1.1514257845545623 1.5780815421220011 1.3736975481370748 1.4159700965704611 1.147217554044505 1.0685992142511374 1.0 11.716363638332602 -9.120141930794812 2.0487095593046614 1.0511108452172275 1.3090338080977024 0.46177755479942106 0.11467704979124896 0.18747556358373818 1.621141399265734 0.024401074684546206 0.023303854529870098 7.583297065169401e-10 9.120141930794812 0.2579229628804749 RPS(ph)ESDKEDELDK ddPTM_A549_PD325901_60min_R1 2 RPSESDKEDELDK 13 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RPS(0.984)ES(0.016)DKEDELDK;RPS(0.998)ES(0.002)DKEDELDK 117.65 3.0664999999999998e-06 40017000.0 6538.5 7300.0 7716.8 7055.1 9055.8 8260.9 7583.299999999999 8441.1 7278.799999999999 7941.5 8591.3 True False 7202.283706610705 7915.196619352223 8240.508452888089 7490.877503705365 8419.751848814007 8193.625969292665 7871.886631240988 8272.735638585149 6972.897348708837 7440.0723346951345 7534.624564737843 0.9558915171855412 1.0505097568358566 1.0936853431893334 0.9941938631903154 1.1174746367879527 1.0874630711713174 1.0447616286127297 1.0979625550689913 0.9254472188756561 0.9874509699547321 1.0 12.879319911669652 -8.761998085560041 24.99997735165957 0.9647945192599902 1.0571305146665548 0.3779205213522273 0.04793284632182278 10.462180179452236 468136.71239571314 0.008496045546124957 0.00931487679437991 1.7298239845407663e-09 8.761998085560041 0.09233599540656467 RPS(ph)ESDKEDELDKVK ddPTM_A549_MK2206_60min_R1 8 RPSESDKEDELDKVK 15 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RPS(0.995)ES(0.005)DKEDELDKVK;RPS(0.998)ES(0.002)DKEDELDKVK;RPS(0.995)ES(0.005)DKEDELDKVK;RPS(0.998)ES(0.002)DKEDELDKVK;RPS(0.967)ES(0.033)DKEDELDKVK;RPS(0.857)ES(0.143)DKEDELDKVK;RPS(0.992)ES(0.008)DKEDELDKVK;RPS(0.966)ES(0.034)DKEDELDKVK 187.57 3.2274e-34 1560525700.0 38502.1 45757.799999999996 44532.4 42068.20000000001 57170.90000000001 44453.1 43223.7 46570.700000000004 60059.3 59397.5 61970.299999999996 True False 45000.3131940316 48086.67657263403 50847.76394868024 52374.910888513296 48761.136343833285 49157.0975364204 51076.88679336479 53172.23934178722 46455.964444994184 45979.56349664469 46581.364216728514 0.9660582928541814 1.0323157636367577 1.0915902701368192 1.1243747745306303 1.0467949396450258 1.0552953603442743 1.0965090364404104 1.1414916723862665 0.9973079411940173 0.9870806548884263 1.0 15.507465271564701 -8.836324147438814 24.99979386277806 0.9987284410676003 1.0703395883843367 0.35033070317180126 0.04508502398546348 31.519479776145857 10521.649565361662 0.00789478618325666 0.00840459403505361 1.4577258410119944e-09 8.836324147438814 0.07161114731673646 RPS(ph)ESDKEDELDKVK ddPTM_A549_PD325901_60min_R1 5 RPSESDKEDELDKVK 15 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RPS(0.998)ES(0.002)DKEDELDKVK;RPS(1)ESDKEDELDKVK;RPS(0.998)ES(0.002)DKEDELDKVK;RPS(0.987)ES(0.013)DKEDELDKVK;RPS(0.888)ES(0.112)DKEDELDKVK 188.86 2.6123e-34 1945882400.0 51625.399999999994 52421.1 53428.0 50681.5 61491.00000000001 55141.6 54383.2 56558.399999999994 52182.4 56022.0 60201.600000000006 True False 56866.372603389216 56838.81006886645 57053.94536866381 53811.98114896224 57172.08429243382 54692.54509173923 56452.78243562892 55430.29834279354 49989.355197184144 52484.76135922564 52797.184849385085 1.0770720591564178 1.0765500136230925 1.0806247630706451 1.0192206516781541 1.0828623619901145 1.0358988883168876 1.0692384943756412 1.0498722327889254 0.9468185726149821 0.9940825729430328 1.0 15.688173386555398 -8.676600582189709 6.203806803625402 0.9749801667071669 1.0619315569041718 0.7183013770321185 0.022622585137730095 0.0812686964630159 4.79622415577652 0.004305077478307868 0.004872626334930742 2.1057141611129695e-09 8.676600582189709 0.08695139019700493 RPS(ph)GELEQR ddPTM_A549_MK2206_60min_R1 2 RPSGELEQR 9 1 Q96NG3 Q96NG3 TTC25 Tetratricopeptide repeat protein 25 1 RPS(1)GELEQR;RPS(1)GELEQR 107.09 0.00020916 5537600.0 860.74 748.84 585.0799999999999 505.38 791.73 689.63 524.38 693.25 894.8900000000001 1033.1 1089.83 True False 1006.011868927429 786.9527574457525 668.0531417820246 629.19812268737 675.2675657983891 762.6061888606555 619.6530583153371 791.520310489084 692.1988438456805 799.7219924808891 819.1951332221603 1.2280491278927133 0.9606413973071494 0.8154994026323799 0.7680686776208369 0.8243061248940075 0.9309212883883695 0.7564169184917403 0.9662170567051317 0.8449743117040232 0.9762289350222614 1.0 9.678063334193313 -5.293812396174431 3.4328248571210285 0.8938509049141823 1.2589765557634325 0.6015027296961777 0.081576857557836 0.15993453383974188 3.208138902721172 0.012459654037697134 0.14430978303818 5.083790015302579e-06 5.293812396174431 0.3651256508492502 RPS(ph)GRSPTSTEK ddPTM_A549_PD325901_60min_R1 1 RPSGRSPTSTEK 12 2 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RPS(0.738)GRS(0.259)PT(0.002)S(0.001)T(0.001)EK 42.568000000000005 0.026843000000000002 9839500.0 754.54 722.93 585.32 576.24 695.61 748.76 719.14 778.94 469.2 709.36 720.38 True False 831.1403453370101 783.8538482230557 625.0433350150912 611.8330360640073 646.7527533242243 742.6623468105867 746.5072662285079 763.4034306333917 449.48115568695175 664.5708885398653 631.7778268650673 1.3155579540693851 1.2407112356452932 0.9893404111958263 0.9684306888387842 1.023702836380732 1.175511889196456 1.1815977618789464 1.2083416007514245 0.7114544648034162 1.0519060028388776 1.0 9.303273494328405 -8.75156791540212 24.9998779871392 0.863742381841341 1.129629276914522 0.3242431966727066 0.13210189938082534 147.15321668428908 372671.1356134142 0.025070699344109968 0.02826002536168844 1.771870936532775e-09 8.75156791540212 0.265886895073181 RPS(ph)GRSPTSTEKR ddPTM_A549_MK2206_60min_R1 1 RPSGRSPTSTEKR 13 3 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RPS(0.602)GRS(0.394)PT(0.001)S(0.001)T(0.001)EKR 55.173 0.005398300000000001 11237000.0 723.53 669.51 914.77 740.74 1264.1 755.54 646.26 467.46 1412.5 1619.5 2110.4 True False 845.644175389853 703.5851992915788 1044.4981412934014 922.2213332530822 1078.1525645431448 835.4907413131374 763.6770766750636 533.7238865362094 1092.571005299002 1253.653825208401 1586.3294359230767 0.5330823196240931 0.443530318078077 0.658437092346845 0.5813554942428755 0.6796523724063491 0.5266817360840119 0.4814114013024564 0.33645211041906836 0.6887415568023175 0.7902859247385184 1.0 10.631476693924927 -9.792110044213485 0.8677349967951336 0.9615911276590781 0.5399640579101822 0.5776010481717679 0.11269714480443657 0.20153244119657654 0.3153033527551722 0.03996344100482335 0.02250054788427703 1.613949552522167e-10 9.792110044213485 -0.42162706974889586 RPS(ph)GRSPTSTEKR ddPTM_A549_PD325901_60min_R1 3 RPSGRSPTSTEKR 13 3 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RPS(0.841)GRS(0.155)PT(0.001)S(0.001)T(0.001)EKR;RPS(0.943)GRS(0.055)PT(0.001)S(0.001)T(0.001)EKR;RPS(0.502)GRS(0.486)PT(0.004)S(0.004)T(0.004)EKR 70.98 0.00073375 38071000.0 3897.61 3609.49 4418.48 3876.55 4335.21 5678.799999999999 4834.3 5469.6 5369.32 4419.6 6171.200000000001 True False 4293.292497931167 3913.674389806255 4718.344623278686 4115.995689216176 4030.7198052625904 5632.553735600141 5018.271931930465 5360.504537181808 5143.666152713269 4140.545701746348 5412.181522459956 0.793264690054182 0.7231232680509584 0.871800881714347 0.7605058463274464 0.7447495595880419 1.040717816323356 0.9272179639772226 0.9904517272630834 0.9503868507306383 0.765041912316418 1.0 12.401994512217675 -7.256363125300998 24.99842561348394 0.9770790740822701 0.7797645907975368 0.513574832320018 0.07767682627562254 122.81581258087128 604815.8264820537 0.0062644432466309906 0.010636820795569836 5.5416216929478946e-08 7.256363125300998 -0.19731448328473333 RPS(ph)LGELLLR ddPTM_A549_MK2206_60min_R1 1 RPSLGELLLR 10 1 Q8N612;Q8N612-2 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 RPS(1)LGELLLR 105.65 0.00013118 2313600.0 121.73 0.0 0.0 0.0 157.78 112.43 145.4 92.654 207.2 122.54 109.81 True False 142.2750479872387 0.0 0.0 0.0 134.57077100990216 124.32726797500612 171.81729791191512 105.78798824097451 160.26953083040925 94.85812889227388 82.54114639817716 1.7236863576004404 0.0 0.0 0.0 1.6303477342165194 1.5062459561108272 2.0815957302442984 1.2816394350843512 1.9416925718146876 1.1492223337277119 1.0 6.367041570686631 -6.7690529742070575 24.99558624202621 1.506143019761706 0.36936133463278403 0.4798525490289347 0.5405158957533859 111.68092942437107 366651.9063286407 0.08123668353041627 0.15562437611455954 1.701950895814414e-07 6.7690529742070575 -1.136781685128922 RPS(ph)LGELLLR ddPTM_A549_PD325901_60min_R1 1 RPSLGELLLR 10 1 Q8N612;Q8N612-2 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 RPS(1)LGELLLR 82.54299999999999 0.00043483 3276900.0 111.45 179.51 153.47 116.36 173.52 177.26 110.6 155.72 144.74 170.32 102.54 True False 122.76432195484635 194.6379376903998 163.8853970900807 123.54729292726626 161.33255381150272 175.81645333036562 114.80894352264221 152.61404244002318 138.65708114690838 159.56596613300698 89.92823005461558 1.3651366415227857 2.1643697154074033 1.8224021198966012 1.3738432620349919 1.7940145570920452 1.9550752107940748 1.276673003048275 1.6970648966107416 1.5418637847392147 1.7743701397892377 1.0 6.490702169098846 -10.808332090237217 0.29015747450705814 0.6494606282887205 1.7833900259629638 0.0 0.3414684314969493 2.425067657453963 0.2508730465779954 0.9296249933021118 0.12920642016037143 1.554776292324761e-11 10.808332090237217 1.1339293976742433 RPS(ph)LPCISR ddPTM_A549_PD325901_60min_R1 2 RPSLPCISR 9 1 Q13370-2;Q13370 Q13370-2 PDE3B cGMP-inhibited 3,5-cyclic phosphodiesterase B 1 RPS(1)LPCISR;RPS(1)LPCISR 63.76 0.0027524999999999997 6217000.0 1098.32 1078.56 950.5999999999999 1273.1200000000001 941.74 1246.26 1105.78 951.0500000000001 810.03 1194.57 1040.8600000000001 True False 1209.8206378595498 1169.4540364066493 1015.1134324221712 1351.7577309346962 875.5954312266279 1236.1108717561867 1147.8610630060343 932.0805616657087 775.9872560552034 1119.1446463334082 912.8408185551701 1.3253358233634147 1.2811149683880727 1.112037730772027 1.4808252473571861 0.959198376571839 1.3541362816275935 1.2574602709187024 1.0210767778121392 0.850079488429783 1.226001974916911 1.0 9.834219494340044 -8.372533249799858 3.6424110332229964 0.9294632515813815 1.2501948600354074 0.275056443789344 0.15804372425094135 0.12780786458057888 3.108722897955528 0.020854160507000594 0.025433452789188453 4.240985134760444e-09 8.372533249799858 0.3207316084540258 RPS(ph)LPPSK ddPTM_A549_MK2206_60min_R1 2 RPSLPPSK 8 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9;H0YJ87 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 RPS(1)LPPSK;RPS(1)LPPSK 62.466 0.0043286 6927400.0 5454.3 6244.7 5473.299999999999 5216.599999999999 8055.9 6288.8 5854.0 5772.700000000001 9150.1 8846.2 8085.599999999999 True False 6374.852495167965 6562.528556729729 6249.496241395291 6494.667234182071 6870.887781586198 6954.276641832416 6917.596024596639 6590.997903152307 7077.6169597071785 6847.837276047274 6077.722368792474 1.0488884006780528 1.079767741683399 1.0282628692427331 1.068602157204564 1.130503725682901 1.1442241385590135 1.1381888814330674 1.084451954731491 1.1645179773345526 1.126711103358248 1.0 12.569315058516297 -6.531930092374764 24.35389107870803 1.092951863336134 1.0539491434599817 0.19804996828926713 0.045137229649492835 322.0479697112297 866511.1011636655 0.009269488008780918 0.019318329148907538 2.9381225583624655e-07 6.531930092374764 -0.039002719876152225 RPS(ph)LPPSK ddPTM_A549_PD325901_60min_R1 2 RPSLPPSK 8 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9;H0YJ87 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 RPS(1)LPPSK;RPS(1)LPPSK 47.559 0.015602000000000001 17345600.0 7226.6 8206.4 7191.1 8337.3 8830.0 7227.1 7461.799999999999 8485.2 9657.7 8800.4 8537.3 True False 7960.239112058263 8897.982128363305 7679.131289597177 8852.276085617881 8209.811261846296 7168.244893737372 7745.762882253633 8315.956029489376 9251.820454556426 8244.741242114334 7487.266222403645 1.0631703048356118 1.1884153526875363 1.025625516910221 1.1823108492028518 1.0965031852721663 0.9573914805230663 1.0345248388626151 1.1106798906930941 1.2356740337177838 1.1011684368113088 1.0 12.870223337482479 RPS(ph)PAEK ddPTM_A549_MK2206_60min_R1 5 RPSPAEK 7 1 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK 83.883 0.0115 941948800.0 19706.4 19536.4 14272.1 10960.800000000001 11380.3 8835.039999999999 8652.099999999999 8915.9 12141.9 26085.0 27285.9 True False 23032.358544777155 20530.719313288835 16296.098387959317 13646.196492049014 9706.272945392246 9769.958068575093 10224.074575403578 10179.756128798592 9391.77903663005 20192.380383180716 20510.057977470387 1.1229787146422223 1.0010073757880715 0.7945418002162664 0.6653416829459431 0.47324453963290897 0.4763496075587434 0.4984907690965273 0.4963299538197656 0.4579108965438618 0.9845111313367018 1.0 14.324043949557892 -5.781430261352113 2.0354469844093757 0.6613990507525362 1.114713312537352 0.43845392440023123 0.18714634974119135 0.3392066562365504 2.6043227736248182 0.033699072195799214 0.193558096432872 1.6541303823316113e-06 5.781430261352113 0.4533142617848158 RPS(ph)PAEK ddPTM_A549_PD325901_60min_R1 8 RPSPAEK 7 1 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK 72.59 0.008217799999999999 2641225800.0 41714.0 41029.299999999996 39220.5 37641.59999999999 43030.1 31657.7 31172.6 31561.5 40810.0 45222.3 45921.6 True False 45948.77457177625 44486.983103340855 41882.238982025854 39966.63614172383 40007.81422178622 31399.89018727699 32358.890351301226 30931.981122982248 39094.89762059783 42366.956260313986 40273.53432100675 1.1409173628898341 1.104620785172469 1.039944461993245 0.9923796561573975 0.993402116211044 0.7796656220186453 0.8034777899893124 0.7680473453467944 0.9707342124231163 1.0519800900169645 1.0 15.297544465283485 -6.0704331406560605 1.384837979126167 0.9404436055247194 1.136869965181704 0.43060966108747456 0.09257991619480367 0.4565670664387033 1.5327690590492102 0.0154162485722883 0.08142077642042647 8.502895846225922e-07 6.0704331406560605 0.19642635965698463 RPS(ph)PFLK ddPTM_A549_MK2206_60min_R1 2 RPSPFLK 7 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RPS(1)PFLK;RPS(1)PFLK 66.27 0.010205 29866000.0 3354.8 3275.3 2801.0 2817.0 4708.5 3875.1000000000004 3318.8999999999996 3099.5 5530.2 4169.4 4998.6 True False 3921.0082230147764 3441.9987800625945 3198.223918321343 3507.1651264599345 4015.8858873122344 4285.160509916801 3921.90116946255 3538.8636168206517 4277.6185299147155 3227.5296442259396 3757.309665658215 1.0435680239115677 0.9160806764271894 0.851200513908419 0.9334245613331794 1.0688195130727192 1.140486382872069 1.0438056797151165 0.9418610473248562 1.1384791008875632 0.8590001707140453 1.0 11.875484307934542 -6.757270541346982 18.914548500397895 1.0616095890422281 0.9285779776844465 0.12410312037657278 0.09099206757399367 3.891291440593099 17646.87970247224 0.010793194821715037 0.021743800969555645 1.7487569707541854e-07 6.757270541346982 -0.13303161135778163 RPS(ph)PFLK ddPTM_A549_PD325901_60min_R1 2 RPSPFLK 7 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RPS(1)PFLK;RPS(1)PFLK 83.869 0.0059871 108862000.0 5212.200000000001 5333.4 4844.5 5155.0 5838.9 5231.299999999999 5963.6 5557.799999999999 5596.6 5684.200000000001 5922.099999999999 True False 5741.338706981161 5782.864335568928 5173.276902345054 5473.412642145562 5428.795807111471 5188.698027231983 6190.548061407134 5446.945318990242 5361.394364700757 5325.298641928361 5193.719243284951 1.1054387882834131 1.113434143180861 0.9960640265708766 1.0538522368574759 1.045261700298963 0.9990332138073387 1.1919296695544335 1.0487562118481264 1.0322842097467237 1.0253343302708422 1.0 12.34255231306653 -8.976138960308722 2.065624801148479 1.0120961698441735 1.0685208719331591 0.16005495332850428 0.052332805817793364 0.37437685631516693 3.195427940198947 0.010074611114712497 0.010126890129003049 1.0564794155896045e-09 8.976138960308722 0.056424702088985645 RPS(ph)PGEMR ddPTM_A549_PD325901_60min_R1 1 RPSPGEMR 8 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 RPS(1)PGEMR 55.401 0.008760200000000001 2786200.0 962.7 1065.9 1272.4 1330.7 1826.0 1883.8 1302.5 1873.6 1934.6 1895.5 1761.4 True False 1060.4325952977172 1155.727133776376 1358.7527155627731 1412.894316761028 1697.7480593580212 1868.458957371899 1352.0673502553489 1836.2295781892333 1853.2954897527222 1775.817806511946 1544.7589664345608 0.6864712348912845 0.7481601718382613 0.8795888194123214 0.9146373948695129 1.0990375173394027 1.209547248451625 0.8752610469554606 1.1886835539316611 1.1997311749096307 1.1495759824658531 1.0 10.593166032139663 -6.157997067141878 1.1192449565357725 1.09690994567886 0.6812897581080927 0.7088469183364292 0.09630906266951486 0.2810016465199538 0.5834697684962659 0.01612527972648207 0.0933751258813084 6.950290112118631e-07 6.157997067141878 -0.41562018757076735 RPS(ph)PHDEEEFEVEEAAEAQAEPK ddPTM_A549_MK2206_60min_R1 1 RPSPHDEEEFEVEEAAEAQAEPK 23 1 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 RPS(1)PHDEEEFEVEEAAEAQAEPK 52.32899999999999 0.0017428 844010.0 138.05 165.0 232.67 181.03 239.47 221.9 234.11 114.68 244.54 293.81 208.24 True False 161.34946500154692 173.39779522801828 265.66610463256933 225.38235812674557 204.24428022399076 245.3813107147011 276.64475663107595 130.93624119277052 189.15208045013648 227.4381169400928 156.52826086837638 1.0308008541487894 1.1077730900864438 1.6972405056999023 1.439882848479791 1.3048396442335641 1.5676486108859324 1.767378971032616 0.8365022422556267 1.2084212742208467 1.4530163158929115 1.0 7.2902793461901325 -8.272607014473916 24.993547138941228 1.081527248534147 1.4178491723887854 0.22982176259138354 0.25274330805589407 659.979225400625 1477052.96165204 0.03830485880847008 0.0465203037130914 5.3381771937858005e-09 8.272607014473916 0.33632192385463844 RPS(ph)PLAPRPPPSR ddPTM_A549_MK2206_60min_R1 2 RPSPLAPRPPPSR 13 2 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 RPS(1)PLAPRPPPSR;RPS(1)PLAPRPPPSR 89.344 3.8662e-05 28302000.0 876.4100000000001 1182.77 876.98 850.1099999999999 1127.83 680.65 1021.6800000000001 997.73 1174.97 1107.6599999999999 1452.77 True False 1024.3265818327104 1242.9679409808682 1001.3489510494292 1058.3869881628887 961.9277010273667 752.6759312210967 1207.306031159872 1139.1612829199764 908.841171041535 857.4388366967198 1092.0071145877405 0.938021893950223 1.1382416143416054 0.9169802446089951 0.9692125390249456 0.8808804339983792 0.6892591826246941 1.1055844005335622 1.0431811914980404 0.8322667122774606 0.78519528420877 1.0 10.09276654032188 -5.801081205087491 24.97836651455695 0.9247368413395403 1.0381319992073401 0.13173539837574344 0.12055831184812274 207.0295288877659 130449.26605852065 0.015941869285472046 0.04956637817074806 1.5809524025843366e-06 5.801081205087491 0.11339515786779986 RPS(ph)PLAPRPPPSR ddPTM_A549_PD325901_60min_R1 4 RPSPLAPRPPPSR 13 2 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 RPS(1)PLAPRPPPSR;RPS(1)PLAPRPPPSR;RPS(1)PLAPRPPPSR;RPS(1)PLAPRPPPSR 94.569 3.5365e-05 80253000.0 6131.17 7000.759999999999 6200.34 6890.4 7274.68 7939.16 7188.639999999999 7443.29 7615.87 8081.43 8330.64 True False 6753.601864871202 7590.738614369358 6621.1323580733115 7316.004358766203 6763.731573083577 7874.506113180108 7462.207628974743 7294.8277418019525 7295.801468801337 7571.167130614533 7306.024092277965 0.9243881185677119 1.0389698307171364 0.9062565732669094 1.0013660325181224 0.9257746056753962 1.077810039184376 1.0213773640387875 0.9984675179913729 0.9986007952687382 1.036291016151563 1.0 12.834870795787783 -7.222894458122767 24.999371055043532 1.0059922036457631 0.9631587843382535 0.31500630593274825 0.04243219545044395 641.3366567227724 415956.98377810733 0.005538912222813541 0.009593639486111279 5.985570382114377e-08 7.222894458122767 -0.04283341930750961 RPS(ph)PLSENVSELK ddPTM_A549_MK2206_60min_R1 2 RPSPLSENVSELK 13 1 Q99618;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 RPS(0.999)PLS(0.001)ENVSELK;RPS(1)PLSENVSELK 152.37 1.4478e-13 15293700.0 2663.2 2602.6000000000004 2753.1000000000004 2377.7 3396.2 2460.3 2817.0 3123.1000000000004 3850.2000000000003 3993.2 4251.0 True False 3112.6830510113723 2735.0612233966085 3143.5309780544444 2960.2366067390094 2896.6234789189366 2720.647312985037 3328.8124361613795 3565.8089890926217 2978.135847505992 3091.133346602156 3195.359378368554 0.9741261255566834 0.8559479230761959 0.9837801029001716 0.9264174248376436 0.9065094519658874 0.8514370344077261 1.0417646474121989 1.1159336296354894 0.9320190610379889 0.9673820627276007 1.0 11.64176248319992 -7.7660413337785545 24.99995057427895 0.9855766226474364 0.9166958695329339 0.3503055336858313 0.0599267576121143 140.16271989958605 761430.0042638056 0.009963929169103637 0.014017284617172306 1.7137941901685305e-08 7.7660413337785545 -0.06888075311450248 RPS(ph)PLSENVSELK ddPTM_A549_PD325901_60min_R1 2 RPSPLSENVSELK 13 1 Q99618;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 RPS(0.999)PLS(0.001)ENVSELK;RPS(0.999)PLS(0.001)ENVSELK 124.18 1.9565000000000002e-06 29495000.0 4343.5 5573.6 4467.0 5241.6 6249.3 5166.4 5095.7 5285.5 5824.0 5136.5 5813.1 True False 4784.448922484299 6043.306832550903 4770.157482253148 5565.361727462693 5810.3707269146125 5124.326551314461 5289.619651974033 5180.076556105465 5579.2375335055585 4812.180513399423 5098.125552277022 0.9384721646071227 1.185397803679379 0.9356688911128542 1.0916486207321798 1.139707264431625 1.005139339698242 1.037561668054935 1.0160747323674366 1.0943703673625012 0.943911730704654 1.0 12.315751187919615 -11.105437432628944 1.4508848514514667 1.00004573036367 1.0569670798327433 0.1048992546088956 0.07562272653474524 0.8767552808265836 3.304434996605826 0.04785774729924939 0.010445606608135077 7.844451231586987e-12 11.105437432628944 0.056921349469073235 RPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_A549_MK2206_60min_R1 2 RPSPPEPWDEEDGASCSTFFGSEER 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 RPS(0.999)PPEPWDEEDGASCSTFFGSEER;RPS(0.998)PPEPWDEEDGAS(0.001)CS(0.001)TFFGSEER 55.442 0.0017396 4152800.0 1615.4099999999999 2008.3400000000001 1509.26 1515.82 2306.3999999999996 1785.52 1533.38 2066.63 2733.3999999999996 2814.7 2790.6 True False 1888.0517150173773 2110.5559276862923 1723.295762572535 1887.1959680477444 1967.1316152696052 1974.4625412677487 1811.9752976077882 2359.5811312889373 2114.289264342859 2178.8573151059513 2097.6170033581016 0.9000936357756308 1.0061683921838336 0.8215492913213848 0.8996856742801514 0.9377935114562855 0.941288394452756 0.8638256148319613 1.1248865391115033 1.007948191189367 1.0387298117901367 1.0 11.03453556991915 -8.23562565450505 24.9989186844509 1.0129431884173572 0.9122191856552778 0.5442319259924577 0.05606924097440424 523.197916829583 506684.0687584279 0.008509613517305854 0.010983570011856021 5.812652303970103e-09 8.23562565450505 -0.10072400276207938 RPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_A549_PD325901_60min_R1 2 RPSPPEPWDEEDGASCSTFFGSEER 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(0.999)PPEPWDEEDGASCSTFFGSEER 103.09 3.5775e-12 47549000.0 3365.8 3633.1 3535.0 3847.3 4354.4 3920.9 3225.8 3462.8 3553.6 3780.8999999999996 3926.3 True False 3707.4935382289977 3939.2740873655584 3774.9063576818608 4084.9389831477415 4048.5619658644973 3888.9694903702507 3348.559584225491 3393.7317374859526 3404.254549976879 3542.1733287475668 3443.389990866367 1.0766987033310687 1.1440104367540505 1.0962761603230669 1.1863131954216892 1.1757488918197927 1.1294014040482747 0.9724601608030415 0.9855786729031177 0.9886346185029011 1.0286878158277812 1.0 11.749613871328302 -7.754291471825392 23.61978549107413 0.9921617763250524 1.1376225569588538 0.8259266239599179 0.031899772571453974 22.299350582442436 73686.00531930184 0.004542270278985201 0.006652733053034012 1.7607939128654843e-08 7.754291471825392 0.1454607806338014 RPS(ph)PQPS(ph)PR ddPTM_A549_MK2206_60min_R1 4 RPSPQPSPR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RPS(1)PQPS(1)PR;RPS(1)PQPS(1)PR;RPS(1)PQPS(1)PR;RPS(1)PQPS(1)PR 66.498 0.005518199999999999 40858000.0 2283.19 2054.03 2312.4 1802.15 2610.6 2144.54 2252.43 2375.4300000000003 2800.5299999999997 3282.92 3157.21 True False 2668.5366533638667 2158.571353528522 2640.3330912982083 2243.6768309015865 2226.5841982409083 2371.4737993695603 2661.66737507383 2712.1544769492766 2166.2144265274424 2541.3060919130394 2373.1876224368343 1.1244524571655075 0.9095662446242071 1.1125682041890408 0.9454274957821229 0.9382251016270721 0.9992778392019784 1.121557920625247 1.1428318820255705 0.9127868382791968 1.070840783040819 1.0 11.212610448092786 RPS(ph)PQPS(ph)PR ddPTM_A549_PD325901_60min_R1 4 RPSPQPSPR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RPS(1)PQPS(1)PR;RPS(1)PQPS(1)PR;RPS(1)PQPS(1)PR;RPS(1)PQPS(1)PR 83.226 0.0019843 53129000.0 4757.17 4099.2 4934.6 4620.01 5406.68 4098.33 4484.18 4936.25 4140.43 5274.110000000001 5402.870000000001 True False 5240.114396356544 4444.653970143653 5269.491630160374 4905.377524896009 5026.933448833424 4064.9545592769796 4654.827923737448 4837.792621336789 3966.4221258331745 4941.101794514756 4738.351241614793 1.1058940397526869 0.9380169901944521 1.1120939249671522 1.0352498737987803 1.0609035068325336 0.8578837557621994 0.9823729154681912 1.0209864939620026 0.8370890893435432 1.0427892620368233 1.0 12.21016943042341 -7.241895802531644 24.441180068337488 0.9303060932535615 1.0467686666392595 0.23919024372112074 0.07525750134521758 546.561428840464 683528.878662637 0.011345065137759382 0.019630980917042587 5.729334747231058e-08 7.241895802531644 0.11646257338569799 RPS(ph)PQPSPR ddPTM_A549_MK2206_60min_R1 6 RPSPQPSPR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RPS(1)PQPSPR;RPS(0.995)PQPS(0.005)PR;RPS(1)PQPSPR;RPS(1)PQPSPR;RPS(1)PQPSPR;RPS(0.996)PQPS(0.004)PR 108.68 0.00018156 364949700.0 7405.45 7608.18 7416.429999999999 6365.98 10896.710000000001 7533.76 7712.6 7075.22 10792.14 11134.54 11299.7 True False 8655.308914130424 7995.403864835786 8468.191294022125 7925.6453857797005 9293.818393784448 8330.977482694849 9113.879586488558 8078.154101952513 8347.737521506244 8619.239680726128 8493.672634145187 1.0190301989430872 0.941336475895442 0.9969999620634512 0.9331234822870409 1.0942049210164537 0.9808451351425658 1.073019879510083 0.9510790502423817 0.9828183732850413 1.014783598566791 1.0 13.052172789603967 RPS(ph)PQPSPR ddPTM_A549_PD325901_60min_R1 6 RPSPQPSPR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RPS(1)PQPSPR;RPS(1)PQPSPR;RPS(1)PQPSPR;RPS(0.988)PQPS(0.012)PR;RPS(1)PQPSPR;RPS(0.999)PQPS(0.001)PR 115.29 8.651e-05 352132600.0 6486.07 6368.7300000000005 6429.82 7146.88 8357.5 7588.290000000001 7143.95 7019.22 7280.8099999999995 7713.03 8296.07 True False 7144.531051607634 6905.445228159883 6866.186250848649 7588.326545857856 7770.498031809787 7526.493482129529 7415.816926569439 6879.216150628435 6974.822875398797 7226.027969486069 7275.705983120682 0.9819708311719347 0.9491099893508909 0.9437140899835562 1.0429677289684933 1.0680060532733182 1.0344691634860814 1.0192573674326324 0.9455049677086889 0.9586455103573563 0.9931720696589632 1.0 12.828871528412307 -6.186929459661578 24.999957788276255 0.9938127590130734 0.957349433650185 0.20492089557446214 0.03654429838760555 226.30262006388037 75928.85936989282 0.0059762639853786085 0.01581170682132789 6.502352963199699e-07 6.186929459661578 -0.03646332536288843 RPS(ph)PSRTPEER ddPTM_A549_MK2206_60min_R1 2 RPSPSRTPEER 11 2 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59;E9PJG2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 RPS(0.973)PS(0.023)RT(0.004)PEER;RPS(0.986)PS(0.006)RT(0.008)PEER 55.841 0.0053442 10794500.0 940.9 1241.02 1165.66 1001.6500000000001 1345.9299999999998 1076.52 1050.01 866.6800000000001 1075.71 1523.63 1609.52 True False 1099.7009172035887 1304.182617175002 1330.968115898057 1247.0542949657772 1147.9454799426892 1190.4366318638574 1240.7832254504115 989.534544096184 832.0634025558865 1179.440924793009 1209.8317635078233 0.9089701149977102 1.0779867552771263 1.100126609371709 1.0307667004460437 0.9488471988983831 0.9839687366219159 1.0255832776722993 0.817910864918191 0.6877513284519629 0.9748801117382649 1.0 10.240590728172034 -8.257951116696425 24.592691699483982 0.8458314115871884 1.0142478579447727 0.33725446392992586 0.09259247971884385 230.7508742612119 1626822.4598843995 0.01967362060234118 0.02487650137752606 5.521395834918041e-09 8.257951116696425 0.16841644635758424 RPS(ph)PTSGDSR ddPTM_A549_MK2206_60min_R1 4 RPSPTSGDSR 10 1 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 RPS(0.992)PT(0.005)S(0.001)GDS(0.002)R;RPS(0.979)PT(0.01)S(0.003)GDS(0.008)R;RPS(0.993)PT(0.003)S(0.003)GDSR;RPS(0.967)PT(0.026)S(0.005)GDS(0.002)R 85.958 0.00064072 13446400.0 1144.8899999999999 1166.6499999999999 992.21 984.27 1084.72 964.52 611.78 861.8199999999999 1302.09 1268.48 1288.6100000000001 True False 1338.119442126918 1226.0275018349541 1132.9202977499538 1225.4161941855589 925.1591249198951 1066.584866203441 722.932506991413 983.9856242130584 1007.1686940104616 981.9294870023798 968.6125731732544 1.3814805621850734 1.265756336218502 1.1696320377490184 1.2651252194373181 0.9551384635541099 1.1011470382933615 0.7463587888633602 1.015871207400747 1.0398055134788249 1.013748442047885 1.0 9.919775919884376 -6.75563624711098 24.98148272128379 1.0006812039187662 1.2629551198638653 0.6735498538477581 0.09608241501751641 67.82779903913087 291983.7719970087 0.013369583893243194 0.02725224404310947 1.755350118374907e-07 6.75563624711098 0.2622739159450991 RPS(ph)PTSGDSR ddPTM_A549_PD325901_60min_R1 4 RPSPTSGDSR 10 1 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 RPS(0.997)PT(0.002)S(0.002)GDSR;RPS(0.964)PT(0.018)S(0.018)GDSR;RPS(0.946)PT(0.042)S(0.012)GDSR;RPS(0.912)PT(0.044)S(0.044)GDS(0.001)R 66.023 0.0022067 17982100.0 1668.48 1674.25 1976.39 1689.6299999999999 2141.26 2296.02 1755.7800000000002 1961.7 1483.1699999999998 1541.9099999999999 1991.4299999999998 True False 1837.8628613299418 1815.3449232808857 2110.5197103985442 1793.9946076718543 1990.865284545979 2277.3219743630034 1822.5971686996816 1922.5723545761216 1420.8375227626102 1444.5535394559922 1746.4967347148731 1.0523139407014035 1.0394207370661088 1.208430378624842 1.0271960846034651 1.1399192709461323 1.3039371497793215 1.043573189959174 1.1008164609537583 0.8135357453127853 0.8271149385754935 1.0 10.770248230105965 -8.683781418009074 7.803902943662715 0.9120964702965988 1.1177607116784654 0.5582318062557226 0.09162099185384123 0.15603722087987226 13.662706747866384 0.01690986370649319 0.01915836979898405 2.0711835206970347e-09 8.683781418009074 0.20566424138186656 RPS(ph)PTSGDSRPAAGR ddPTM_A549_MK2206_60min_R1 2 RPSPTSGDSRPAAGR 15 2 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 RPS(0.938)PT(0.017)S(0.019)GDS(0.026)RPAAGR;RPS(0.938)PT(0.017)S(0.019)GDS(0.026)RPAAGR 40.179 0.022109999999999998 39550000.0 784.37 507.18000000000006 368.40999999999997 447.09999999999997 533.63 432.5 291.8 353.22 636.3399999999999 880.79 932.96 True False 916.7524799946638 532.9932956590684 420.65607773965223 556.6395200710817 455.13373389538634 478.26686292973534 344.81628287962064 403.29001669088257 492.21000602617073 681.8189272647778 701.2802836139091 1.3072554603565374 0.7600289186976611 0.5998401603020755 0.7937475686647715 0.6490040352338793 0.6819910299845902 0.49169539046881255 0.5750767932795819 0.7018734413716352 0.9722488186195097 1.0 9.453847357209172 -5.260975153799176 23.619356988473083 0.7668629400817574 1.3072557302639485 0.5253931452844418 0.1546312483632624 13.429412405992275 682777.8425024891 0.02554015826733317 0.20838685077627023 5.483083330128521e-06 5.260975153799176 0.5403927901821911 RPS(ph)PTSGDSRPAAGR ddPTM_A549_PD325901_60min_R1 4 RPSPTSGDSRPAAGR 15 2 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 RPS(0.94)PT(0.016)S(0.018)GDS(0.026)RPAAGR;RPS(0.947)PT(0.026)S(0.026)GDSRPAAGR;RPS(0.906)PT(0.036)S(0.036)GDS(0.021)RPAAGR;RPS(0.994)PT(0.001)S(0.002)GDS(0.003)RPAAGR 71.685 0.00046178 201183000.0 2915.77 2838.6400000000003 2583.2999999999997 2282.73 3071.55 3482.4900000000002 2897.9300000000003 2776.29 2807.27 3530.06 3784.1600000000003 True False 3211.776823923576 3077.8621550079483 2758.618272644853 2423.7290476440235 2855.8149242722498 3454.129756055879 3008.212311958143 2720.9147179926294 2689.290204444392 3307.171409156192 3318.7323097666663 0.9677721865278703 0.9274210354207046 0.8312265091482495 0.7303177302101932 0.860513791928291 1.0407979413979105 0.9064341535185899 0.8198656788272061 0.8103365844030581 0.9965164708896672 1.0 11.696416550430502 -7.048600365057756 24.991118488286496 0.9102992612825529 0.8574803041095168 0.10046753296103317 0.08770344199861738 950.0233039563517 488516.2346408793 0.014917357427111222 0.025837994153778687 8.941278759197154e-08 7.048600365057756 -0.052818957173036085 RPS(ph)QDDVEAAPEETR ddPTM_A549_MK2206_60min_R1 2 RPSQDDVEAAPEETR 15 1 O94761 O94761 RECQL4 ATP-dependent DNA helicase Q4 1 RPS(1)QDDVEAAPEETR;RPS(1)QDDVEAAPEETR 56.9 0.0047494 5761100.0 279.38 412.27 0.0 140.31 154.06 229.61 0.0 139.11 137.11 175.36 127.57 True False 326.532513814793 433.2527820524548 0.0 174.68595629875523 131.39797808204793 253.90717779721746 0.0 158.8292685065078 106.05480391967868 135.74605420719067 95.89084824711287 3.405252115126893 4.518186980012447 0.0 1.82171666527118 1.370286951090811 2.6478770647944727 0.0 1.656354818107367 1.10599505435986 1.415630966756807 1.0 6.583321226934345 -5.7540212797862935 24.999999808196367 1.1482141978712705 3.9617204635491445 0.6574756096682153 0.7604718993718581 63.427953286465986 213755.22098498416 0.0925000836283793 0.34436311994949326 1.7618897143104572e-06 5.7540212797862935 2.8135062656778738 RPS(ph)QDDVEAAPEETR ddPTM_A549_PD325901_60min_R1 1 RPSQDDVEAAPEETR 15 1 O94761 O94761 RECQL4 ATP-dependent DNA helicase Q4 1 RPS(1)QDDVEAAPEETR 53.778999999999996 0.0071682000000000004 916800.0 0.0 0.0 122.98 0.0 0.0 0.0 85.985 161.48 0.0 208.18 218.47 True False 0.0 0.0 131.3261623388162 0.0 0.0 0.0 89.25720622779741 158.25915472139064 0.0 195.035479271779 191.59957499543458 0.0 0.0 0.6854199042035737 0.0 0.0 0.0 0.46585284038299263 0.825989069783488 0.0 1.017932734331098 1.0 7.581950550678364 -10.97462892008882 0.815272062974218 1.0970796696855531 0.2088928575202644 0.5216491589807637 0.29151622068106325 0.5945131678776046 0.5663865848583839 0.3670333319624246 0.05465420644796837 1.0601591839604408e-11 10.97462892008882 -0.8881868121652887 RPS(ph)QEQSASASSGQPQAPLNR ddPTM_A549_MK2206_60min_R1 7 RPSQEQSASASSGQPQAPLNR 21 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(0.971)QEQS(0.026)AS(0.003)ASS(0.001)GQPQAPLNR;RPS(0.92)QEQS(0.076)AS(0.004)ASSGQPQAPLNR;RPS(0.86)QEQS(0.116)AS(0.021)AS(0.002)SGQPQAPLNR 278.61 1.2542999999999996e-127 251772200.0 5708.76 6123.339999999999 4785.97 5884.28 6377.62 4751.32 5459.86 4489.81 7379.429999999999 7093.5599999999995 7039.180000000001 True False 6672.259122218264 6434.991851100198 5464.692512091539 7325.928864155362 5439.48054638213 5254.101528729037 6451.845888427429 5126.254316966453 5708.00088752822 5491.119869308616 5291.157334515261 1.2610207371256574 1.2161785114805563 1.032797206094076 1.384560768277837 1.028032281500935 0.9929966539561201 1.2193638330012921 0.9688342252699399 1.0787811676462173 1.0377918330813867 1.0 12.369367602114416 -2.0000000000000004 0.1688220236655869 0.9937446343135931 2.0375008644823875 0.3123717769800518 0.10782952781044594 46.63929801475566 0.47137542052008935 0.1267758221382884 12.398378782570369 0.00999999999999999 2.0000000000000004 1.0437562301687944 RPS(ph)QEQSASASSGQPQAPLNR ddPTM_A549_PD325901_60min_R1 6 RPSQEQSASASSGQPQAPLNR 21 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(0.985)QEQS(0.008)AS(0.006)AS(0.001)SGQPQAPLNR;RPS(0.979)QEQS(0.02)AS(0.002)ASSGQPQAPLNR 303.46 1.2253999999999998e-163 322446600.0 5975.89 6095.09 5964.020000000001 5291.78 7354.4 6660.0599999999995 6466.42 7110.759999999999 7218.439999999999 6815.589999999999 7404.18 True False 6582.557953582295 6608.744625020213 6368.77426176571 5618.641232095644 6837.852315302645 6605.822679495857 6712.503151660795 6968.930313516691 6915.07406960128 6385.25248424413 6493.512798964149 1.0137129404953742 1.0177456839808565 0.9807902839248525 0.8652699095306219 1.0530282340235668 1.0172957048070537 1.033724481567447 1.0732142261471143 1.0649203726378085 0.9833279277223741 1.0 12.664783429543876 RPS(ph)QGPPAR ddPTM_A549_MK2206_60min_R1 1 RPSQGPPAR 9 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RPS(1)QGPPAR 51.927 0.02011 14150000.0 725.09 685.59 771.89 522.1 804.26 772.09 948.33 1269.7 1038.4 1030.0 1189.0 True False 847.467465251515 720.4836026083458 881.3556088229429 650.01452343796 685.9544193967793 853.792051328137 1120.6292856176508 1449.6838632931701 803.2040579840594 797.3222846339322 893.738485269399 0.9482275623344825 0.8061458854948725 0.9861448548422713 0.7272983475048929 0.7675113365964233 0.9553041134519109 1.2538671032834177 1.6220448007855373 0.8987014336100231 0.8921203436748009 1.0 9.803708939306402 -7.517663918649565 24.632712753777042 1.0355560274943982 0.8474194070852153 0.24627543533446838 0.20978797081290348 309.27510770161894 1460891.2050324245 0.03504624529310602 0.05284646016897408 3.0362398874717496e-08 7.517663918649565 -0.1881366204091829 RPS(ph)QGPPAR ddPTM_A549_PD325901_60min_R1 1 RPSQGPPAR 9 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RPS(1)QGPPAR 43.958 0.050105000000000004 46038000.0 950.9 923.47 962.47 1021.2 928.46 802.94 879.65 1012.6 1268.2 865.1 1420.4 True False 1047.4346679844189 1001.2940578182469 1027.7890020022799 1084.2772046865266 863.2481726131157 796.4011228539082 913.1255621129501 992.4028986306672 1214.9019642842973 810.47743836111 1245.69980465746 0.8408403566158064 0.8038004453999098 0.8250695698590875 0.8704161312642086 0.6929825062070151 0.6393202598862902 0.7330221604747217 0.796662963998422 0.9752766756019269 0.6506201858030904 1.0 10.282740726609884 -8.747799197158283 4.121034302365345 0.9895317914417907 0.770626146036416 0.0 0.12009320855597531 0.08928634615824695 3.3894069570588488 0.012087417061124092 0.01328981011295016 1.7873137762938834e-09 8.747799197158283 -0.21890564540537472 RPS(ph)QGPPARSPSQDFSFIEDTEILDSAMYR ddPTM_A549_PD325901_60min_R1 2 RPSQGPPARSPSQDFSFIEDTEILDSAMYR 30 2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RPS(0.506)QGPPARS(0.413)PS(0.079)QDFS(0.001)FIEDTEILDSAMYR;RPS(0.462)QGPPARS(0.462)PS(0.066)QDFS(0.01)FIEDTEILDSAMYR 97.446 3.9633999999999995e-10 7669100.0 2514.2 3038.3 2816.8 2617.9 2245.5 2524.52 2513.9 3739.2 2150.1 2825.4 2666.0 True False 2769.4397331437835 3294.348203914779 3007.964986794417 2779.6017373177247 2087.7838265544556 2503.9611461219392 2609.5678401588652 3664.6187226543475 2059.738774174158 2647.003761814221 2338.0989011664237 1.1844835698618967 1.4089858227431287 1.2865003209632462 1.188829837750253 0.8929407671817938 1.0709389345646458 1.1161066962809023 1.567349747620237 0.8809459570536566 1.1321179615172359 1.0 11.191120241565248 -6.483490969100912 0.2582073762126856 0.9308134295210566 1.4575891166191295 0.0 0.19806922491306703 5.3506848145561365 0.46033140396925804 0.1383476223111265 0.8661225848204491 3.284800747825893e-07 6.483490969100912 0.5267756870980729 RPS(ph)QNAISFFNVGHSK ddPTM_A549_MK2206_60min_R1 1 RPSQNAISFFNVGHSK 16 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 RPS(0.997)QNAIS(0.003)FFNVGHSK 89.01100000000001 2.6132e-06 3252400.0 668.99 498.97 724.33 755.72 1265.0 650.91 617.71 701.78 1121.0 979.67 1037.9 True False 781.8991567648308 524.3654417268139 827.0508856685825 940.8714339255604 1078.9201757353667 719.7888641609107 729.9399112322493 801.2594641111132 867.0952898691539 758.3618665896354 780.1607854172483 1.002228221899993 0.6721248382746781 1.060103123776282 1.2059968297719044 1.3829459207672619 0.9226160525050624 0.9356275332934868 1.0270440133473009 1.1114315229333285 0.9720584279098899 1.0 9.607627673261657 -5.842998286917671 10.681316407169154 1.0682137277321098 0.837511687793743 0.2770836625693488 0.14422352327201815 0.34438383995408506 42.56003943635024 0.01946579587449001 0.060648483086962024 1.4354950956784947e-06 5.842998286917671 -0.2307020399383668 RPS(ph)QNAISFFNVGHSK ddPTM_A549_PD325901_60min_R1 4 RPSQNAISFFNVGHSK 16 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 RPS(0.998)QNAIS(0.002)FFNVGHSK;RPS(1)QNAISFFNVGHSK;RPS(0.987)QNAIS(0.013)FFNVGHSK;RPS(1)QNAISFFNVGHSK 130.71 1.873e-10 31507500.0 6890.45 7102.88 7282.43 7079.32 10547.5 9422.099999999999 8217.23 8722.279999999999 10245.5 8909.3 8627.4 True False 7589.963411518807 7701.46462515953 7776.659492609083 7516.593518097751 9806.67998689963 9345.369541487302 8529.94118429079 8548.30728290371 9814.917264685992 8346.765277529352 7566.284493594599 1.0031295304775092 1.0178661179974624 1.02780426762866 0.9934325790235731 1.29610246551021 1.2351332479500112 1.1273619425111487 1.1297893028130868 1.2971911475169908 1.103152450135266 1.0 12.885369307650187 -6.721191012621628 24.997978316319927 1.1578248075521083 1.0123118248457654 0.4591713726159544 0.08248617840710383 165.4280676345542 102745.45694049295 0.016442742539178823 0.034227953777042616 1.900242326171674e-07 6.721191012621628 -0.14551298270634283 RPS(ph)RHDNSAIGR ddPTM_A549_PD325901_60min_R1 2 RPSRHDNSAIGR 12 2 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 RPS(1)RHDNSAIGR;RPS(0.993)RHDNS(0.007)AIGR 51.771 0.005392 10487900.0 793.29 612.0799999999999 511.33 746.79 695.87 710.14 620.96 438.54999999999995 772.48 901.23 648.45 True False 873.8242168107677 663.6621296949468 546.0319286770766 792.9175222168544 646.9944918211753 704.3568552861665 644.5909726023502 429.8027762141804 740.0153519715615 844.3261839951259 568.6947608632285 1.5365434622333773 1.166991812422478 0.9601493916494823 1.394276115737862 1.1376832289418224 1.2385499282902044 1.1334568506028049 0.7557705922273272 1.3012522760861793 1.4846737513697388 1.0 9.151510703205972 -7.821189010531156 5.989183571282124 1.1096297566556828 1.2254905711964381 0.04652939518023502 0.2178068720105971 0.45079210110714646 32.159772904008854 0.030908371536980554 0.04312893475420832 1.5094230908960793e-08 7.821189010531156 0.11586081454075536 RPS(ph)RPSNSNISK ddPTM_A549_PD325901_60min_R1 1 RPSRPSNSNISK 12 2 Q6P158-2;Q6P158 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 RPS(0.587)RPS(0.407)NS(0.006)NISK 58.885 0.0022946999999999998 5506400.0 1569.4 1398.2 1791.7 1397.1 1469.4 1540.4 1440.4 1820.1 1301.3 1299.6 1856.0 True False 1728.7243326687826 1516.0312209833276 1913.295536367352 1483.395693955686 1366.194413154806 1527.8554931179922 1495.2152102171235 1783.796677659172 1246.6108863926486 1217.5430342088764 1627.7237661533702 1.0620501884997948 0.9313811424932413 1.1754424037739792 0.9113313479849473 0.839328171992838 0.9386454414981074 0.9185927251960015 1.095884151077202 0.7658614516261774 0.7480034754829248 1.0 10.668640171603847 -6.439357888470753 15.769560887281317 0.9049381296683946 1.043767548218545 0.29037335672983955 0.10677013496047447 3.573100594309935 672.7801992609589 0.015402979604800934 0.035793782447165176 3.636152686833067e-07 6.439357888470753 0.1388294185501503 RPS(ph)RSPPSLALR ddPTM_A549_MK2206_60min_R1 1 RPSRSPPSLALR 12 2 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 RPS(0.5)RS(0.5)PPSLALR 91.441 5.5413999999999995e-05 10814000.0 250.2 290.38 301.57 149.62 275.74 216.39 333.32 327.02 401.14 224.62 269.82 True False 292.4276431972983 305.15910168673906 344.33716067410506 186.276906716697 235.17901127056913 239.28824617194311 393.87992943603535 373.3760864567475 310.28243048894956 173.87818599463483 202.8162473468368 1.441835390520843 1.504608756343299 1.697778975691493 0.9184515991864507 1.1595669200425973 1.1798277963536887 1.9420531372048309 1.8409574742709625 1.529869695095652 0.8573188207021951 1.0 7.664029419176192 -6.160106043228234 19.47220472567768 1.3171477221517265 1.5437147929655122 0.09277607758752016 0.3385133485748524 15.009128000357753 2873.5489828261634 0.05035670576293912 0.13323275683163616 6.91662064712293e-07 6.160106043228234 0.2265670708137857 RPS(ph)RSPPSLALR ddPTM_A549_PD325901_60min_R1 1 RPSRSPPSLALR 12 2 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 RPS(0.5)RS(0.5)PPSLALR 61.409 0.0016773 16537000.0 263.48 299.58 257.24 320.5 414.38 245.09 171.09 286.51 365.28 256.38 217.57 True False 290.22829563627573 324.8266579761014 274.6978533097826 340.29655709168827 385.2753783333939 243.09406829933053 177.60092357404037 280.7953332872531 349.9285518954172 240.19212304591545 190.81026928986455 1.5210307952313762 1.7023541719478905 1.4396387276854705 1.7834289441452202 2.0191543136921664 1.27400935601658 0.9307723543130818 1.4715944499857605 1.8339083802865566 1.2588008179006012 1.0 7.575995008156276 -7.296373057977506 24.974361612197434 1.363371782494594 1.6845691905768017 0.3412555624243546 0.2662861614510287 856.4390866209278 612273.1939728232 0.05320735620733456 0.08505979417811944 5.0539034632751285e-08 7.296373057977506 0.32119740808220776 RPS(ph)RSQEGLRPR ddPTM_A549_MK2206_60min_R1 2 RPSRSQEGLRPR 12 3 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 RPS(0.852)RS(0.148)QEGLRPR;RPS(0.581)RS(0.419)QEGLRPR 59.248000000000005 0.0030644 46642000.0 1863.93 1727.67 1403.8200000000002 1597.4 1295.74 1551.4 1107.67 1500.37 1526.79 2265.5 2149.1000000000004 True False 2178.5158152867316 1815.6010235247898 1602.9027850831385 1988.7630717100103 1105.1383624563991 1715.568118264026 1308.9193010872823 1713.0520421904173 1180.9745027826289 1753.721976541917 1615.419157857413 1.3485761913187742 1.1239194574941682 0.9922519349152232 1.231112718972441 0.6841186431899092 1.0619956498098264 0.8102660505916915 1.0604381122126212 0.7310638214474297 1.085614199888492 1.0 10.657692838746335 -4.29980750164978 0.5110246634809529 0.8826609140821319 2.341511033824244 0.33998976810616877 0.15717869861632602 6.279048815856468 0.5337432859076293 0.027607329637605333 6.867511042715922 5.0140943101724914e-05 4.29980750164978 1.4588501197421122 RPS(ph)RSQEGLRPR ddPTM_A549_PD325901_60min_R1 3 RPSRSQEGLRPR 12 3 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 RPS(0.867)RS(0.133)QEGLRPR;RPS(0.868)RS(0.132)QEGLRPR;RPS(0.786)RS(0.214)QEGLRPR 113.59 9.335499999999999e-06 393893000.0 3613.9900000000002 3042.36 3496.4 3742.3399999999997 3748.78 2965.43 3023.59 3394.99 3184.8799999999997 3775.5099999999998 4589.79 True False 3980.879604321176 3298.7503543633497 3733.6867295612055 3973.4958423291996 3485.478625388917 2941.2805212651842 3138.6543720219333 3327.2742611318668 3051.0305693185423 3537.12365426743 4025.2749270760096 0.9889708594918055 0.8195093289589507 0.9275606752837089 0.9871365097577515 0.8658982773931407 0.7307030139682292 0.7797366462871335 0.8265955298483982 0.7579682443044541 0.8787284641043944 1.0 11.974871607612 -5.244748848800688 22.323332868433113 0.8683199872494309 0.9889712767342558 0.15688404337265638 0.08429764191662911 1383.5152677451836 1850292.7578173415 0.014673388686758134 0.469569886490724 5.691819919298764e-06 5.244748848800688 0.12065128948482484 RPS(ph)RVSEFLK ddPTM_A549_PD325901_60min_R1 3 RPSRVSEFLK 10 2 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 RPS(0.916)RVS(0.084)EFLK;RPS(0.67)RVS(0.33)EFLK;RPS(0.5)RVS(0.5)EFLK 52.495 0.004737399999999999 10247100.0 2291.76 2684.84 2615.2200000000003 2713.6 2826.92 3557.92 3001.81 3774.1 3591.58 2810.33 3368.3099999999995 True False 2524.417788095457 2911.1008892468 2792.704555795404 2881.2129089672544 2628.3668915445674 3528.9454791446155 3116.045522203461 3698.8226147758273 3440.6383826558877 2632.885284186083 2954.029223476324 0.8545676420643878 0.9854678708360894 0.9453882627839841 0.975350171240561 0.8897565639013838 1.1946210454180022 1.0548458686324285 1.2521279699538737 1.1647272665119128 0.891286133279238 1.0 11.52846838305857 -7.2507700836953966 24.88154746566725 1.0995176941212457 0.9365443209175572 0.4068606097681233 0.0975767602755857 491.6807601940279 1146633.2116926934 0.013066515514060092 0.022481549001444282 5.613450745073748e-08 7.2507700836953966 -0.16297337320368843 RPS(ph)SMYSTGGK ddPTM_A549_PD325901_60min_R1 1 RPSSMYSTGGK 11 1 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 RPS(0.861)S(0.128)MY(0.009)S(0.002)TGGK 49.928999999999995 0.0072691000000000006 5593900.0 2695.7 2115.6 2459.6 2223.0 2509.7 2236.6 2516.8 2665.6 2354.4 3060.1 3480.7 True False 2969.365479530545 2293.8890366988467 2626.5232467763244 2360.309661200695 2333.427329994976 2218.3858711423677 2612.5782012458035 2612.4325168772525 2255.4527556465478 2866.8847637600684 3052.595965975233 0.9727345225596872 0.7514551752891421 0.8604228257037652 0.773213909573726 0.7644075259234318 0.7267210911201101 0.855854567838671 0.8558068430922012 0.7388638328773993 0.939162861942709 1.0 11.57582093530811 -10.90203863671795 1.0746179442457917 1.0035264098188288 0.8029632769334261 0.4149790530255698 0.07109755877072224 0.32919963488663917 0.6552428673290056 0.0511016588934706 0.011328183072946472 1.2530296950343368e-11 10.90203863671795 -0.20056313288540273 RPS(ph)SPVISK ddPTM_A549_PD325901_60min_R1 3 RPSSPVISK 9 1 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 RPS(0.5)S(0.5)PVISK;RPS(0.5)S(0.5)PVISK;RPS(0.899)S(0.101)PVISK 105.13 0.00046687 188096000.0 22910.9 22413.1 24604.800000000003 23380.0 26954.6 26656.4 26252.7 26179.300000000003 27021.9 25819.5 28570.4 True False 25236.797701886862 24301.930595781276 26274.62968868196 24824.129500167463 25061.40188432186 26439.31911630127 27251.760864528656 25657.133324236464 25886.263514188515 24189.252363616575 25056.421922687612 1.0071987843977008 0.9698883053121334 1.0486185844791873 0.9907292260947355 1.0001987499112848 1.0551913277115397 1.0876158195537589 1.0239743489075321 1.0331189183380374 0.9653913251562128 1.0 14.61289279089912 -7.13375473736471 17.944156707822447 1.0252727636715593 1.0032785332718899 0.11210080217972351 0.033606053678142116 4.1707047862103686 575.7014874638328 0.004635914162608366 0.008029732401685835 7.349287932655226e-08 7.13375473736471 -0.021994230399669412 RPS(ph)SSEIITEGK ddPTM_A549_MK2206_60min_R1 1 RPSSSEIITEGK 12 1 J3QT09;Q9BQF6-5;Q9BQF6 J3QT09 SENP7 Sentrin-specific protease 7 1 RPS(0.333)S(0.333)S(0.333)EIIT(0.001)EGK 46.318999999999996 0.016352000000000002 3196200.0 1279.3 1313.8 1022.6 1245.9 2093.6 1461.0 1233.9 1606.8 2541.6 1975.1 2060.5 True False 1495.2145641179206 1380.6668083064878 1167.6200567209587 1551.1455559305766 1785.634213375149 1615.6020502666888 1458.0836581396982 1834.568820618622 1965.931658101199 1528.923538233475 1548.8209830930166 0.9653888864108471 0.891430851840138 0.7538767032902702 1.001500866054202 1.1528990327915194 1.0431173569461265 0.9414152274899358 1.184493779878268 1.2693085124500358 0.9871531667786382 1.0 10.596954687841246 -6.52033828182567 4.9919627795474835 1.1143602469616836 0.871621127344755 0.4263760680382821 0.10356042869977666 0.12947377668925653 9.321023688900755 0.017417616273516748 0.038944932609807754 3.017600327382827e-07 6.52033828182567 -0.2427391196169285 RPS(ph)SSEIITEGK ddPTM_A549_PD325901_60min_R1 1 RPSSSEIITEGK 12 1 J3QT09;Q9BQF6-5;Q9BQF6 J3QT09 SENP7 Sentrin-specific protease 7 1 RPS(0.652)S(0.174)S(0.174)EIITEGK 60.549 0.0036186 8772400.0 2863.1 2940.4 3123.2 2872.7 3352.0 2977.7 2469.2 2919.4 2580.8 3576.5 3601.2 True False 3153.759804297181 3188.1978273346963 3335.1591333272936 3050.140154624937 3116.567083772228 2953.450598453288 2563.1667571980843 2861.170276775004 2472.337950973755 3350.6791796306916 3158.275229887667 0.9985702874949733 1.0094743476324872 1.0560064878974837 0.9657613515632151 0.9867940115792497 0.9351466808541369 0.8115716872747821 0.9059280995205631 0.7828126971257318 1.0609205771309134 1.0 11.624921185908356 -7.30063659884697 2.5235321835497646 0.8894319149050112 1.0079125560877689 0.22202839163557764 0.07636518579911261 0.2788552866815119 3.4915890082375003 0.012595373747262672 0.02202155549563754 5.004531200170298e-08 7.30063659884697 0.1184806411827577 RPS(ph)STALHQHHF ddPTM_A549_MK2206_60min_R1 1 RPSSTALHQHHF 12 1 Q9UGP4 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 RPS(0.449)S(0.449)T(0.101)ALHQHHF 56.568999999999996 0.0035429000000000003 4065500.0 500.91 612.58 334.1 524.7 667.2 652.16 512.9 533.5 671.55 955.04 1006.1 True False 585.4513619262941 643.7577054592695 381.480403824049 653.2515235546784 569.0557638344955 721.1711383312278 606.0872909148641 609.1252587752274 519.4449972449872 739.295800695913 756.2576030526003 0.7741427782849992 0.8512413003991894 0.5044318262510291 0.8637949832409719 0.752462866538501 0.9536051411850307 0.8014296827806022 0.8054467899780713 0.6868625123876713 0.9775713959261743 1.0 9.562733931288848 -10.931280280564495 1.1422893811520456 1.0022442198027661 0.7717963847582923 0.360460071132356 0.10844728386506243 0.42652587941303305 0.9729210703045387 0.07891914828994347 0.017825101151283374 1.171439110059785e-11 10.931280280564495 -0.23044783504447386 RPS(ph)TADGEGDERPFTQAGLGADER ddPTM_A549_MK2206_60min_R1 4 RPSTADGEGDERPFTQAGLGADER 24 2 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 RPS(0.5)T(0.5)ADGEGDERPFTQAGLGADER;RPS(0.5)T(0.5)ADGEGDERPFTQAGLGADER;RPS(0.587)T(0.413)ADGEGDERPFTQAGLGADER;RPS(0.5)T(0.5)ADGEGDERPFTQAGLGADER 189.34 3.1795e-51 52595000.0 4117.07 4388.76 3542.93 3844.3499999999995 5436.8 4653.66 4011.59 4374.1 6535.2 6690.4 6536.6 True False 4811.930763302562 4612.129138090406 4045.3707486391427 4786.215922579429 4637.05392208541 5146.107212350501 4740.443976137959 4994.142070119444 5054.987634569933 5179.033993315399 4913.38181901762 0.9793520920107646 0.9386873049920134 0.8233373463835492 0.9741184582997428 0.9437601417698372 1.0473656234962445 0.9648026859605554 1.0164367952820672 1.0288204378915184 1.0540670731652795 1.0 12.262500639973176 -6.935902763480918 2.007131027866787 1.0120974225199992 0.9187288675992671 0.4718604177913738 0.044882602750887596 0.20299479898048756 1.6469534828786743 0.006184102560779756 0.013101867977724281 1.1590368300740883e-07 6.935902763480918 -0.09336855492073215 RPS(ph)TADGEGDERPFTQAGLGADER ddPTM_A549_PD325901_60min_R1 1 RPSTADGEGDERPFTQAGLGADER 24 2 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 RPS(0.898)T(0.102)ADGEGDERPFTQAGLGADER 197.36 6.833699999999999e-62 34926000.0 1940.8 1977.0 1521.5 1911.4 2161.3 2032.1 1568.6 2007.6 2230.7 2745.8 2004.9 True False 2137.828587258554 2143.6087282821027 1624.7581395227583 2029.46283689564 2009.4977440802254 2015.551251340607 1628.2939313708562 1967.5568430682667 2136.951436468208 2572.4297193988414 1758.3100101082387 1.215842812114203 1.219130139713045 0.9240453220321148 1.1542121839883683 1.1428574782193976 1.1463002768303259 0.9260562255859655 1.1190045166990474 1.2153439519670715 1.4630126113201658 1.0 10.77997374115923 RPS(ph)TASLTR ddPTM_A549_PD325901_60min_R1 1 RPSTASLTR 9 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 RPS(0.999)T(0.001)ASLTR 122.39 4.7674e-05 7102600.0 842.1 885.47 718.23 778.3 1127.9 768.72 706.0 800.89 718.59 875.86 962.22 True False 927.5893720787448 960.0916644572349 766.9734068678478 826.3738233524515 1048.6801950437634 762.4597991883041 732.8672163380239 784.9156206639491 688.3901612640384 820.5580501247975 843.8730400151379 1.0992048899466027 1.1377205088102023 0.9088729826634695 0.9792632116054182 1.2426990143267898 0.9035243016824268 0.8684567246334559 0.9301347281456803 0.815750863721976 0.9723714483283858 1.0 9.720882152784986 RPS(ph)TEDTHEVDSK ddPTM_A549_MK2206_60min_R1 4 RPSTEDTHEVDSK 13 1 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 RPS(0.826)T(0.158)EDT(0.015)HEVDSK;RPS(0.448)T(0.448)EDT(0.104)HEVDSK;RPS(0.43)T(0.426)EDT(0.143)HEVDSK;RPS(0.445)T(0.445)EDT(0.11)HEVDSK 126.63 3.4077e-07 93614000.0 4291.150000000001 4551.87 4232.41 4033.68 4984.67 4118.04 3460.9399999999996 4064.01 5793.499999999999 5743.0 5889.6 True False 5015.391211455184 4783.540740391269 4832.629380272205 5021.931781078773 4251.431646152422 4553.808259466284 4089.7479988670116 4640.095863008647 4481.281500318419 4445.652311313277 4427.049775309211 1.132896955310352 1.080525628392592 1.0916139699230432 1.1343743657655199 0.9603306630667998 1.028632721697424 0.9238089035448804 1.0481237163601929 1.0122500825067908 1.0042020164552512 1.0 12.112129879057445 -6.756840964728337 24.999999925302266 1.0019952844762636 1.1064551776258946 0.7104349248404249 0.034603881805741796 47.7902805974083 259816.23183042428 0.004529215589782751 0.009183911278209236 1.7504875862520652e-07 6.756840964728337 0.104459893149631 RPS(ph)TEDTHEVDSK ddPTM_A549_PD325901_60min_R1 4 RPSTEDTHEVDSK 13 1 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 RPS(0.742)T(0.25)EDT(0.008)HEVDSK;RPS(0.833)T(0.159)EDT(0.008)HEVDSK;RPS(0.949)T(0.045)EDT(0.006)HEVDSK;RPS(0.766)T(0.227)EDT(0.007)HEVDSK 163.18 3.6463e-19 91878900.0 11035.2 10980.2 10356.5 10585.300000000001 12407.300000000001 11647.7 11863.100000000002 14366.3 14527.599999999999 16192.6 17867.4 True False 12155.485380315129 11905.539989015253 11059.354368693688 11239.12994003946 11535.854050861322 11552.844992982622 12314.55676223741 14079.752876355675 13917.055493089865 15170.1964725536 15669.823070780565 0.7757257580643266 0.7597750105561466 0.7057740421661817 0.7172467671952854 0.7361827889666583 0.7372670987284566 0.7858772052889542 0.898526601912316 0.8881437544142361 0.968115364419231 1.0 13.935701269867376 -8.663643476437763 0.6094323760689382 0.977958516379263 0.7268031229810469 0.910616905135938 0.029784228174820737 0.1442559082607667 0.11662240109258858 0.010518842322394016 0.01114283999594398 2.169484359760847e-09 8.663643476437763 -0.25115539339821613 RPS(ph)TFGIPR ddPTM_A549_MK2206_60min_R1 2 RPSTFGIPR 9 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 RPS(0.997)T(0.003)FGIPR;RPS(0.997)T(0.003)FGIPR 103.91 0.00026412 13734200.0 1063.94 896.27 831.21 590.04 989.42 845.6600000000001 693.47 726.19 1103.65 1126.3899999999999 1104.79 True False 1243.5070611644032 941.8863147213086 949.088076811098 734.5998264879024 843.8776286767485 935.1471798963235 819.4645225789254 829.1296563636031 853.6750371668976 871.9377166881695 830.4401523471648 1.497407197435892 1.1342013172883696 1.1428735401685304 0.8845909297757601 1.0161811495886897 1.1260861812295728 0.9867833585150986 0.998421926035419 1.027978999755806 1.0499705658784868 1.0 9.6977323904451 -4.912077408200525 1.245044723177406 1.0133140837236843 2.1183101091221577 0.8270515981236994 0.0627990402966091 0.7929419792580886 0.578294881861276 0.008360845231075931 1.383169358150865 1.2243979443880956e-05 4.912077408200525 1.1049960253984734 RPS(ph)TFGIPR ddPTM_A549_PD325901_60min_R1 2 RPSTFGIPR 9 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 RPS(0.97)T(0.03)FGIPR;RPS(0.98)T(0.02)FGIPR 101.39 0.00030762 20298400.0 891.23 1433.46 1302.9499999999998 1348.73 1459.5700000000002 1471.48 1381.03 1437.03 1437.6799999999998 1416.8899999999999 1418.67 True False 981.7070135111502 1554.2627049283074 1391.3760222748454 1432.0379889119274 1357.0548384431481 1459.49675474764 1433.585852378613 1408.367309321773 1377.2593092668726 1327.4273235920393 1244.1825836900873 0.7890377396214083 1.2492239686546343 1.1183053359806734 1.1509870076019588 1.0907200086488078 1.173056731286945 1.1522310882433184 1.1319619224573412 1.1069591612366865 1.0669071734271176 1.0 10.280982501043306 -10.367568237748593 0.8039849586696944 1.0019573580064103 1.116045566113561 0.045890825785977696 0.11088807165563722 0.920249601985282 1.107814082749217 0.059562701685580546 0.019355455135797412 4.2897478204319925e-11 10.367568237748593 0.11408820810715081 RPS(ph)TSQTVSTPAPVPVIESTEAIEAK ddPTM_A549_MK2206_60min_R1 2 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.588)T(0.19)S(0.19)QT(0.021)VS(0.006)T(0.006)PAPVPVIESTEAIEAK;RPS(0.698)T(0.114)S(0.146)QT(0.031)VS(0.005)T(0.005)PAPVPVIESTEAIEAK 122.63 9.0947e-18 22178000.0 3330.8 3134.1000000000004 2775.8 2553.8 3460.9 2535.4 2643.84 2659.3 3854.6000000000004 3770.8 3702.4 True False 3892.957609758441 3293.6123031765587 3169.4501793917857 3179.4811146444404 2951.8061946265057 2803.69434513769 3124.1915055807262 3036.2639187646914 2981.53925453135 2918.973661065663 2782.991898958302 1.3988390017288979 1.1834789402043844 1.1388643210129854 1.1424686919981863 1.0606592838920559 1.0074389171550004 1.1226017246942537 1.0910070991946441 1.071343130983373 1.0488617168300993 1.0 11.442420993780873 -2.0000000000000004 0.4922265949117208 1.0403550311170213 11.377089162919058 0.8614289491683398 0.03908056987442658 24.17973352952261 0.23429750887986664 0.008221005971496376 259.27566006276373 0.00999999999999999 2.0000000000000004 10.336734131802036 RPS(ph)TSQTVSTPAPVPVIESTEAIEAK ddPTM_A549_PD325901_60min_R1 2 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.207)T(0.121)S(0.15)QT(0.15)VS(0.186)T(0.186)PAPVPVIESTEAIEAK;RPS(0.433)T(0.131)S(0.25)QT(0.104)VS(0.041)T(0.041)PAPVPVIESTEAIEAK 102.09 2.5048e-12 24423000.0 3184.4 3678.1 3778.5 3520.7 3865.5 4490.5 3720.9 4350.5 4655.1 5166.8 4923.1 True False 3507.6779437686223 3988.066395293072 4034.9317319663132 3738.1656429101618 3594.00061525106 4453.9308568205315 3862.5008856546087 4263.725864598776 4459.462335546312 4840.567366228394 4317.589910102182 0.8124157265518549 0.9236788297012415 0.93453334290167 0.865799142749454 0.8324089804920826 1.0315780214325918 0.8945965147401405 0.9875245109829961 1.0328591710648989 1.1211271721064946 1.0 12.076010505614423 -7.808778332487203 0.9363981184369877 1.0153844641575298 0.8817888145757387 0.5390264853225585 0.06159907533079863 0.2908323497221166 0.5136447082863046 0.009608308778331935 0.016265586144520488 1.5531795634349152e-08 7.808778332487203 -0.13359564958179115 RPS(ph)TYGIPR ddPTM_A549_MK2206_60min_R1 1 RPSTYGIPR 9 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;A0A494C0Q7 P78347-2 GTF2I General transcription factor II-I 1 RPS(0.957)T(0.043)YGIPR 57.175 0.0058704 4267700.0 1196.1 1301.3 943.05 823.53 1353.2 899.3 1097.5 1005.3 1431.9 1374.8 1426.6 True False 1397.9724381626243 1367.5306116983043 1076.7886705365736 1025.2948869696668 1154.1460725732 994.4633290929736 1296.9015437298947 1147.8043536021296 1107.5769362744354 1064.231725159932 1072.3358478429977 1.3036703388911637 1.2752820065179118 1.004152451587376 0.9561322500148123 1.076291606677855 0.9273804760825028 1.2094173167283464 1.0703776768359807 1.0328638537099408 0.9924425517440575 1.0 10.066541102896801 -5.74807623519698 9.498221490900878 1.026019003427389 1.2902223657390541 0.665032086670057 0.07101314856915356 0.08213811346909473 49.038056999558165 0.009230377014225468 0.03380260323638968 1.7861740058683311e-06 5.74807623519698 0.2642033623116651 RPS(ph)TYGIPR ddPTM_A549_PD325901_60min_R1 2 RPSTYGIPR 9 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;A0A494C0Q7 P78347-2 GTF2I General transcription factor II-I 1 RPS(0.978)T(0.022)YGIPR;RPS(0.989)T(0.011)YGIPR 79.82 0.00072039 14602900.0 3047.6000000000004 2607.15 2688.8199999999997 2855.1 3170.1000000000004 3426.0 2735.1 2625.74 3371.7 2868.2 3548.8 True False 3356.9901084754574 2826.8636802937203 2871.2994943881595 3031.4530425974367 2947.4431122512965 3398.0997918866815 2839.185727204147 2573.3675558468194 3229.99917440259 2687.101362509926 3112.3200976967014 1.0786133826529687 0.908281793503748 0.9225591855134337 0.9740171150264681 0.9470244125700876 1.0918220765278848 0.9122409129142308 0.826832547767584 1.037810724158154 0.8633756420165579 1.0 11.603774731750622 RPS(ph)VAS(ph)SVSEEYFEVR ddPTM_A549_MK2206_60min_R1 1 RPSVASSVSEEYFEVR 16 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 2 RPS(0.999)VAS(0.572)S(0.412)VS(0.017)EEYFEVR 57.00899999999999 0.0023428 1688000.0 294.0 335.33 135.37 176.48 412.21 303.77 165.92 244.88 588.31 411.65 518.32 True False 343.6200123901106 352.39686468976595 154.56750154343464 219.71760792248827 351.5744550512852 335.9147397737933 196.0655162967327 279.59248991354764 455.05872433802165 318.65797909665855 389.60683909573976 0.8819660691471368 0.9044935286753782 0.3967268693285235 0.5639469995764015 0.9023826580336063 0.8621890225372751 0.5032394111761285 0.7176272638397967 1.167994703055503 0.8178962664932926 1.0 8.605875192253778 -8.752172747602833 24.8084620148028 1.0793308312537773 0.71102307659777 0.28457103160122776 0.18396042841533905 110.44475555423485 295680.36545511894 0.02966549539908581 0.03340867948634468 1.7694050090727536e-09 8.752172747602833 -0.3683077546560073 RPS(ph)VASS(ph)VSEEYFEVR ddPTM_A549_MK2206_60min_R1 1 RPSVASSVSEEYFEVR 16 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 2 RPS(0.999)VAS(0.15)S(0.738)VS(0.112)EEYFEVR 55.588 0.0029634 2087500.0 240.05 295.32 328.32 222.25 456.71 438.24 294.68 260.18 520.44 436.21 466.0 True False 280.56457134097326 310.35052658629303 374.8807129108405 276.70125997718185 389.5285640000787 484.6142659198313 348.2195416002967 297.0613117678324 402.56117097190275 337.6698580389975 350.27933905428057 0.8009737945106032 0.8860086564745971 1.0702335853521399 0.7899445645987793 1.112051213330958 1.3835079945858118 0.9941195576663324 0.8480697507591183 1.1492575384513912 0.9640016420913452 1.0 8.452362084215025 -5.511978547043845 0.8273639984580125 1.067504417648584 0.7135236960948862 0.1941274693380196 0.15021123256787933 1.9718037841863274 1.2244330148897042 0.02365613531066809 0.584926996438973 3.0762487692387926e-06 5.511978547043845 -0.35398072155369775 RPS(ph)VASS(ph)VSEEYFEVR ddPTM_A549_PD325901_60min_R1 2 RPSVASSVSEEYFEVR 16 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 2 RPS(1)VAS(0.156)S(0.824)VS(0.02)EEYFEVR;RPS(0.999)VAS(0.161)S(0.778)VS(0.059)EEY(0.002)FEVR 69.922 0.00038446 6681400.0 1361.96 1154.56 1126.78 956.9300000000001 1227.37 1234.2199999999998 962.3499999999999 1046.1 1336.1399999999999 1556.24 1561.6100000000001 True False 1500.2251765780397 1251.8588231286728 1203.250066678576 1016.0373927542881 1141.1637653966345 1224.1689215243362 998.9727558681259 1025.2347148504257 1279.9866823520122 1457.97874081042 1369.5418698614026 1.095421183968521 0.9140712311740865 0.8785785182313154 0.741881219635228 0.833244890506429 0.8938528631097798 0.729421113623362 0.7485968391416754 0.9346093832688347 1.0645740542112576 1.0 10.419477657691896 -8.961698704643178 6.8430361239277 0.9716156787662968 0.8491609907243852 0.2831397111863937 0.10155345767479487 0.20587668979096707 24.883482695798705 0.01776784299997006 0.01856798851950161 1.0921977948450358e-09 8.961698704643178 -0.12245468804191162 RPS(ph)VASSVSEEYFEVR ddPTM_A549_PD325901_60min_R1 2 RPSVASSVSEEYFEVR 16 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RPS(1)VASSVSEEYFEVR;RPS(1)VASSVSEEYFEVR 156.74 1.2902000000000001e-20 17437800.0 1920.48 2100.1 1823.98 1816.58 2521.6 1742.1 1861.8400000000001 1795.47 2139.47 2174.8 2220.91 True False 2115.4457158173464 2277.0827973015894 1947.7662512827605 1928.7860208474851 2344.4915150477473 1727.9129151914144 1932.6933400379403 1759.6579423310334 2049.5555161073366 2037.4827568463108 1947.752149508447 1.086095947244222 1.1690824204076762 1.0000072400250295 0.9902625553945616 1.2036908883090824 0.8871318230235231 0.9922686213056897 0.9034301118728669 1.0522671052498038 1.0460688015980417 1.0 10.927594391535857 -5.769989263525189 24.99810223570979 1.0141327551282937 1.127589189022996 0.24264478006257073 0.0807246828371734 169.30950134208214 495032.0141984778 0.010459634799026256 0.03327814724939281 1.698285636360541e-06 5.769989263525189 0.11345643389470239 RPS(ph)VGSQSNQAGQGK ddPTM_A549_MK2206_60min_R1 2 RPSVGSQSNQAGQGK 15 1 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 RPS(0.975)VGS(0.024)QS(0.001)NQAGQGK;RPS(0.995)VGS(0.005)QSNQAGQGK 127.32 1.4676e-09 33949000.0 5115.1 4786.1 4264.8 4030.6000000000004 5552.5 4795.4 3639.7 5012.4 5672.4 7110.799999999999 7500.7 True False 5978.403827811752 5029.692046914052 4869.612769316985 5018.097180940507 4735.734605352272 5302.846045071104 4300.9863769600925 5722.923049831205 4387.610456961458 5504.465341334917 5638.069181211253 1.0603636875784812 0.892094773096328 0.8637022024392441 0.8900382417553887 0.8399568102381589 0.9405429189735249 0.7628473930921315 1.0150501644965135 0.7782115323421497 0.9763032634786448 1.0 12.460985465085153 -5.261776080713972 7.276436029571252 0.8895038092526398 1.06248804580808 0.2578128636809688 0.0795780892179492 0.1160148550419487 53.09920041692303 0.011860492138888054 0.0984776413908231 5.472980733310879e-06 5.261776080713972 0.17298423655544026 RPS(ph)VGSQSNQAGQGK ddPTM_A549_PD325901_60min_R1 2 RPSVGSQSNQAGQGK 15 1 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 RPS(0.75)VGS(0.247)QS(0.003)NQAGQGK;RPS(0.993)VGS(0.007)QSNQAGQGK 142.74 7.139e-14 42038000.0 4115.4 3986.8 4428.4 4329.4 5015.799999999999 4296.2 4111.299999999999 4642.8 4855.8 4783.7 5768.299999999999 True False 4533.192378402644 4322.781627675816 4728.93785413249 4596.817205219201 4663.507511570627 4261.21317160057 4267.7577712896855 4550.195711793861 4651.727612499362 4481.656365608649 5058.835668266425 0.8960940176094097 0.8545012945947615 0.9347877978714844 0.9086709880802375 0.921853923981826 0.8423308150392663 0.8436245118735338 0.8994551335867238 0.9195253448692134 0.8859066906880639 1.0 12.304589659915647 -9.892584476925308 0.7103987826265646 0.9949003575239942 0.8874209915490673 0.0009162944562814967 0.043598507609561896 0.30109137295404137 0.3125124149452745 0.0153038109060538 0.006983917894286808 1.2806059728416668e-10 9.892584476925308 -0.10747936597492691 RPS(ph)VNGEPGSVPPPR ddPTM_A549_MK2206_60min_R1 2 RPSVNGEPGSVPPPR 15 1 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 RPS(1)VNGEPGSVPPPR;RPS(1)VNGEPGSVPPPR 134.52 6.697400000000001e-10 38715000.0 4226.0 5188.3 4715.5 5032.2 6427.700000000001 4700.0 4590.6 5609.0 6398.0 7135.9 8830.6 True False 4939.245484219758 5452.362308978954 5384.22880644209 6265.089225904045 5482.193844722706 5197.3508803925015 5424.652598311126 6404.092926842082 4948.863215506557 5523.895233902212 6637.718307838477 0.744117971741435 0.8214211655442298 0.8111565686787067 0.9438618717075723 0.8259154110605729 0.7830026282156255 0.81724658184201 0.9648033601063627 0.7455669231492467 0.8321978995973733 1.0 12.696471690139207 -10.989247740901636 1.212749890522895 1.0017678128551282 0.8245682745457971 0.011546927461371426 0.0821248415942209 0.3390433607879634 0.8723821095565875 0.050750779850082986 0.011140443957191616 1.0250670155893495e-11 10.989247740901636 -0.1771995383093311 RPS(ph)VNGEPGSVPPPR ddPTM_A549_PD325901_60min_R1 2 RPSVNGEPGSVPPPR 15 1 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 RPS(1)VNGEPGSVPPPR;RPS(1)VNGEPGSVPPPR 131.98 9.5117e-10 54853000.0 6620.299999999999 6674.5 6295.799999999999 8105.4 8894.2 7459.6 6635.0 7410.5 7214.400000000001 8834.7 9743.8 True False 7292.387982392729 7236.98353915979 6723.070847720923 8606.052149300991 8269.502075324273 7398.851490822502 6887.498555811317 7262.691764075216 6911.203856751803 8276.875534260667 8545.374371037286 0.8533725575685385 0.8468889980628578 0.786749714618394 1.0071006576925827 0.9677167688933533 0.8658311701239588 0.805991435454837 0.8498974355869713 0.8087654860594343 0.9685796285664631 1.0 13.060927982111526 -10.935007904176642 1.1999075372116383 0.9998075285217485 0.8626915788375394 0.3348091496685195 0.06396495509933063 0.42697431907535327 1.0948931900038201 0.047912388760519405 0.011317833330717371 1.1614274756222758e-11 10.935007904176642 -0.13711594968420904 RPS(ph)VSK ddPTM_A549_MK2206_60min_R1 3 RPSVSK 6 1 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6;A0FGR8-4 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 RPS(0.994)VS(0.006)K;RPS(0.999)VS(0.001)K;RPS(0.999)VS(0.001)K 77.072 0.018752 520951000.0 8360.8 8054.0 6041.3 5149.9 11358.0 11719.900000000001 11903.9 13178.5 17319.1 20728.0 21111.4 True False 9771.89863806544 8463.914198584598 6898.0471823472835 6411.625731187792 9687.253245851622 12960.092038960005 14066.684543422592 15046.592732463612 13396.351502919608 16045.530403778781 15868.856735001167 0.615790967254247 0.533366350199391 0.4346908726658673 0.40403828947840836 0.6104569098846874 0.8166997947857554 0.8864333945618394 0.9481837906618737 0.8441913445076308 1.0111333583589506 1.0 13.953910573119057 -7.2842780837768455 2.078024848916826 0.9236624147201026 0.49455623857080666 0.8967478565456468 0.06874785754926735 0.08154976752825958 0.6869558096414818 0.011995503565821592 0.02170480426777499 5.196631436623574e-08 7.2842780837768455 -0.4291061761492959 RPS(ph)VSK ddPTM_A549_PD325901_60min_R1 3 RPSVSK 6 1 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6;A0FGR8-4 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 RPS(0.997)VS(0.003)K;RPS(0.995)VS(0.005)K;RPS(1)VSK 75.043 0.01925 950280000.0 17125.0 16385.300000000003 15617.0 15578.5 15990.7 13450.5 12278.1 13855.2 15697.3 17734.2 18341.9 True False 18863.517393241316 17766.146735215363 16676.863532649964 16540.748563659472 14867.568396920224 13340.963587499056 12745.349814334115 13578.847166805866 15037.597069831178 16614.459585462486 16085.962578883878 1.1726694812782636 1.1044503335185594 1.0367339505403155 1.0282722269522493 0.9242573034725913 0.8293543841144952 0.7923274564286875 0.8441426554498446 0.9348273064846678 1.0328545465642427 1.0 13.97351464853553 -6.020792283330052 1.264455580424542 0.9335379310435185 1.1627087172234032 0.5929084233040629 0.07256628148737436 0.3734869898632148 0.9919686511199269 0.01241590945957926 0.07702754692071233 9.53251981426916e-07 6.020792283330052 0.22917078617988473 RPS(ph)VYLPTR ddPTM_A549_MK2206_60min_R1 2 RPSVYLPTR 9 1 Q9BW61 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 1 RPS(1)VYLPTR;RPS(1)VYLPTR 95.417 0.00038492 13093000.0 1570.6999999999998 2147.24 2110.84 1681.79 2163.8999999999996 2214.2 2054.45 1996.3200000000002 2926.2 3171.0 3249.2 True False 1835.795760071929 2256.5253443964243 2410.1888524632027 2093.828625498421 1845.593176500997 2448.505174332993 2427.716971768458 2279.3044734735936 2263.4203721811937 2454.6688976448527 2442.3339666419943 0.7516563193837063 0.9239216975305629 0.9868383625589958 0.8573064347859277 0.7556678168131666 1.0025267665173097 0.9940151530981516 0.9332484846891956 0.9267448281420776 1.0050504685973876 1.0 11.254044773715925 -7.294903364161728 24.99970531539325 0.9666258718651233 0.866346526390055 0.43641383406678147 0.06785842112132068 564.5510424294641 421753.89355524036 0.01036295599904261 0.016566953187758127 5.071035324651095e-08 7.294903364161728 -0.10027934547506823 RPS(ph)VYLPTR ddPTM_A549_PD325901_60min_R1 2 RPSVYLPTR 9 1 Q9BW61 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 1 RPS(1)VYLPTR;RPS(1)VYLPTR 112.44 0.00011668 23892000.0 2579.1000000000004 2364.3 2689.8 2424.3 2903.1 2805.7 2549.5 2661.4 2872.9 3138.3 3511.8 True False 2840.9283333669296 2563.5478585115734 2872.3460030813767 2574.043505015226 2699.1962711512974 2782.8513094268715 2646.5226176399306 2608.3162891720904 2752.1620037788657 2940.147202414371 3079.8708631343784 0.9224180037456904 0.8323556319184942 0.9326189735624811 0.8357634522363145 0.876399170971841 0.9035610365152678 0.8592966183480075 0.8468914461295342 0.8935965584537515 0.9546332729750198 1.0 11.588654145640252 -10.293181566297589 0.6939567935065791 1.0013005948367804 0.8753095271200306 0.5443653069287571 0.034163560778180745 0.3038155872303611 0.2685730540337243 0.020276055041189036 0.0062332436466350765 5.091179786628186e-11 10.293181566297589 -0.12599106771674973 RPS(ph)YRK ddPTM_A549_MK2206_60min_R1 1 RPSYRK 6 2 F8VYN3;P18846;F8VS03;J3KR46;A0A0A0MSU8;G5E998;C9K092;C9IYM9;Q03060-20;Q03060-1;Q03060-6;Q03060;Q03060-15;Q03060-16;Q03060-31;Q03060-25;Q03060-21;Q03060-22;Q03060-26;Q03060-7;Q03060-2;Q03060-32;Q03060-30;Q03060-13;Q03060-14;Q03060-12;C9J4L5;C9JBT4;H7C3I0;E7EWP8;C9J896;P16220-3;P16220;P16220-1 F8VYN3;C9J4L5 ATF1;CREM;CREB1 Cyclic AMP-dependent transcription factor ATF-1;cAMP-responsive element modulator;Cyclic AMP-responsive element-binding protein 1 1 RPS(1)YRK 52.786 0.029125 89560000.0 3290.8 4061.4 3731.2 2687.8 3938.5 2628.1 2856.3 2368.2 4280.2 4462.4 4010.2 True False 3846.2065876645465 4268.107912358021 4260.340265633915 3346.311120659925 3359.151867299401 2906.2037976084084 3375.2527374539413 2703.8996023083273 3310.741534074892 3454.340740728603 3014.356664110465 1.2759626733817713 1.4159266430462494 1.4133497592897286 1.110124478799001 1.1143843418710655 0.9641207466290416 1.1197257370504219 0.8970071904567559 1.0983244197653332 1.1459628456899864 1.0 11.557634413973584 -6.384251884606683 3.23404000690045 1.0403462435689248 1.3742076007580193 0.7564515447722986 0.07910562786168009 0.07876423672370282 1.5413658003491761 0.010108857857548968 0.025566834981728948 4.1280800978660173e-07 6.384251884606683 0.3338613571890945 RPS(ph)YRK ddPTM_A549_PD325901_60min_R1 4 RPSYRK 6 2 F8VYN3;P18846;F8VS03;J3KR46;A0A0A0MSU8;G5E998;C9K092;C9IYM9;Q03060-20;Q03060-1;Q03060-6;Q03060;Q03060-15;Q03060-16;Q03060-31;Q03060-25;Q03060-21;Q03060-22;Q03060-26;Q03060-7;Q03060-2;Q03060-32;Q03060-30;Q03060-13;Q03060-14;Q03060-12;C9J4L5;C9JBT4;H7C3I0;E7EWP8;C9J896;P16220-3;P16220;P16220-1 F8VYN3;C9J4L5 ATF1;CREM;CREB1 Cyclic AMP-dependent transcription factor ATF-1;cAMP-responsive element modulator;Cyclic AMP-responsive element-binding protein 1 1 RPS(1)YRK;RPS(1)YRK;RPS(1)YRK;RPS(1)YRK 51.335 0.030743 277438000.0 13910.6 14885.6 14091.199999999999 14089.7 17294.0 16217.7 17081.0 15966.0 14932.000000000002 17241.399999999998 18210.5 True False 15322.793871557515 16140.06175301774 15047.513569269206 14959.9887689696 16079.329101061137 16085.628428161306 17731.026802081848 15647.545604915296 14304.459967428751 16152.775061564269 15970.723945870652 0.9594301375122908 1.0106030138471507 0.9421935799697954 0.9367132523029813 1.0068002650073082 1.0071946946600605 1.110220605038154 0.9797643273998913 0.8956675987832896 1.0113990521851508 1.0 13.963142090510571 -8.53245545383133 24.99066608416286 0.9500468694785272 0.996891300700932 0.016946816604211934 0.05262990626008808 334.6868766660171 873369.7810456164 0.009816239837650844 0.011137620165639784 2.9345704913585156e-09 8.53245545383133 0.04684443122240478 RPS(ph)YTLGMK ddPTM_A549_PD325901_60min_R1 1 RPSYTLGMK 9 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 RPS(0.916)YT(0.084)LGMK 42.629 0.020143 4802400.0 1714.4 1748.6 1618.2 1898.9 2154.4 1973.6 1841.3 1911.5 2124.5 2392.1 2284.0 True False 1888.4446259254241 1895.960658712234 1728.0207830270979 2016.1907402852 2003.0823762765172 1957.5276559449949 1911.3716790980225 1873.3736329572598 2035.214653147762 2241.0623977616606 2003.0824794689106 0.9427692794887402 0.9465215127910865 0.8626807935963069 1.0065440444667884 0.9999999484832031 0.977257639667442 0.9542151652211526 0.9352453791388354 1.0160413632529854 1.1188068493094938 1.0 10.968006111839118 -6.6005710863698415 0.33109071901887405 1.008980880089151 0.9025964978316195 0.3254507525450675 0.050130423036007656 2.661161938834799 0.38187019457773863 0.015639855754549514 0.10230336281233325 2.5085855345188303e-07 6.6005710863698415 -0.10638438225753155 RPSAS(ph)SPNNNTAAK ddPTM_A549_PD325901_60min_R1 1 RPSASSPNNNTAAK 14 1 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.126)AS(0.558)S(0.316)PNNNTAAK 90.759 5.439e-05 5709000.0 1114.5 1221.4 1031.3 1001.1 1676.9 1152.4 1369.1 1119.9 1113.5 1203.1 1251.5 True False 1227.6432195484645 1324.3316645036725 1101.2902197106941 1062.935673336939 1559.1203289909445 1143.0152364770024 1421.2018497002675 1097.5627159554454 1066.7034673005558 1127.136060677669 1097.5734339121454 1.1185066817558653 1.2065995983369235 1.003386366400379 0.9684415096931192 1.4205157311740686 1.041402061275195 1.2948580985917217 0.9999902348614053 0.9718743496719322 1.0269345319885812 1.0 10.100101752164607 -8.47567617405702 22.050295084055666 0.98667704838189 1.1462974852148797 0.2556850940239451 0.12312272062538517 100.90283654229283 47135.72300339833 0.01891110849024939 0.02286154286619659 3.3444432106767786e-09 8.47567617405702 0.15962043683298976 RPSASS(ph)PNNNTAAK ddPTM_A549_PD325901_60min_R1 1 RPSASSPNNNTAAK 14 1 O75151;A0A087WW48;E7ET14 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.097)AS(0.36)S(0.543)PNNNTAAK 102.36 1.1549e-05 18726000.0 1670.2 1360.8 1642.5 1328.5 1894.9 1788.2 1613.9 1395.9 1703.8 1508.2 1471.1 True False 1839.757474463745 1475.4793917280151 1753.969927154867 1410.5584277575902 1761.8087610501177 1773.6374920758203 1675.3178476599664 1368.057679437634 1632.1952111241012 1412.9719946089776 1290.1640260712409 1.425987267732232 1.1436370584762696 1.3594937478577747 1.0933171280964715 1.3655695907249188 1.3747379838801077 1.2985308951463959 1.060375000226593 1.26510674467835 1.0951878722829584 1.0 10.333338780199169 -11.795963175364582 0.3103064748169259 0.7460805866648661 1.2888678469013894 0.35500156082038425 0.11517103680196476 4.652960756964609 0.3310350034964206 0.9499817920195304 0.04358293709645778 1.599693663859905e-12 11.795963175364582 0.5427872602365234 RPSDENT(ph)IAPSEVQK ddPTM_A549_MK2206_60min_R1 1 RPSDENTIAPSEVQK 15 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 RPS(0.291)DENT(0.709)IAPSEVQK 67.449 0.001843 3719600.0 1275.9 1534.0 1405.2 1031.0 1790.9 1118.6 961.37 1261.0 1610.3 1916.9 2399.1 True False 1491.2407272399396 1612.0740477562422 1604.4784898340417 1283.5950462833496 1527.4609823908847 1236.9695095334148 1136.0384848251563 1439.7506116505372 1245.5696211206957 1483.8709586551315 1803.3372582084216 0.8269339084811327 0.8939393008259612 0.8897273555075649 0.7117886798160954 0.8470190339816889 0.6859335401090301 0.6299645169832442 0.7983812263053333 0.6907025380034256 0.8228471695468249 1.0 10.81645351795143 -10.89822853233767 1.1347484430637014 1.000711018901253 0.7693009182787065 0.14824106562466866 0.09718902681601514 0.3494443128023316 0.7950215180979263 0.06374079826141392 0.015027770980059531 1.2640709991128613e-11 10.89822853233767 -0.2314101006225464 RPSDS(ph)GPPAER ddPTM_A549_MK2206_60min_R1 1 RPSDSGPPAER 11 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 RPS(0.229)DS(0.771)GPPAER 119.54 5.712100000000001e-06 98513000.0 2406.8 2151.1 2126.4 2238.9 2638.3 1798.9 1949.6 2088.9 2765.8 2948.4 2678.8 True False 2813.008999389521 2260.58180190903 2427.955494437168 2787.4306005080407 2250.2095649348767 1989.2584039868232 2303.817083968841 2385.0079719879523 2139.3507160750296 2282.3543922472686 2013.5800288811315 1.3970187223959512 1.1226679692314727 1.205790412902679 1.3843157761437017 1.1175168270740303 0.9879212027605265 1.1441398161110006 1.1844614754712326 1.062461230936912 1.1334808448192073 1.0 10.975547097385538 -2.0000000000003313 0.13559910831811417 0.9502907606690734 2.188660736279621 0.34507395727860635 0.1029552155855693 43.04226132984131 0.3752174501850652 0.23116532666449005 10.3464192453737 0.009999999999992371 2.0000000000003313 1.2383699756105475 RPSES(ph)DKEDELDKVK ddPTM_A549_PD325901_60min_R1 1 RPSESDKEDELDKVK 15 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 RPS(0.404)ES(0.596)DKEDELDKVK 59.434 0.0019622 5347100.0 1363.2 1836.0 1336.4 1853.6 1559.4 1788.3 1896.9 2043.2 1803.9 1814.5 1626.2 True False 1501.5910604652001 1990.7261634425595 1427.0961404260365 1968.0926621689646 1449.873123637951 1773.7366777089755 1969.0875675235086 2002.4467731406082 1728.088356231228 1699.9321603354933 1426.1877093311473 1.052870565803302 1.3958374135590954 1.0006369646077762 1.3799674820448142 1.0166075013491118 1.2436909013476365 1.3806650798070403 1.4040555531639762 1.2116836689342008 1.191941389771706 1.0 10.477948160903274 -10.289359710622536 0.9502519253003904 1.0143954545220204 1.2340989609965642 0.06001574181310565 0.15512514387258466 0.5075243047178848 0.8950413051113487 0.06396699832589624 0.025890095320180342 5.136180638422147e-11 10.289359710622536 0.21970350647454384 RPSGRS(ph)PTSTEK ddPTM_A549_MK2206_60min_R1 1 RPSGRSPTSTEK 12 2 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RPS(0.037)GRS(0.962)PT(0.002)STEK 62.376999999999995 0.0015649000000000001 36195000.0 838.14 934.89 1034.6 883.77 1332.9 934.09 751.93 839.52 1265.5 1346.3 1652.6 True False 979.5975414443789 982.4719077619512 1181.321837163607 1100.2936896739427 1136.832175681953 1032.9347838012397 888.5459478604281 958.5245309221721 978.8662705882384 1042.1698949540414 1242.2138105603099 0.7885901228247688 0.7909040290888409 0.9509810848349551 0.8857522596513776 0.9151662668837793 0.8315273707473327 0.7152922792410775 0.7716260459943062 0.7880014392584425 0.8389617681709423 1.0 10.278697797098962 -10.785156585987316 1.0525299616145187 0.9991972983780759 0.8269883906998923 0.0510229692252705 0.07968063449270094 0.386311673115077 0.7653544545176608 0.04846615212827309 0.012429392404134472 1.6399983609806316e-11 10.785156585987316 -0.17220890767818364 RPSGRS(ph)PTSTEK ddPTM_A549_PD325901_60min_R1 5 RPSGRSPTSTEK 12 2 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RPS(0.015)GRS(0.972)PT(0.01)S(0.002)T(0.001)EK;RPS(0.055)GRS(0.941)PT(0.004)STEK;RPS(0.3)GRS(0.697)PT(0.003)STEK;RPS(0.034)GRS(0.966)PTSTEK;RPS(0.106)GRS(0.849)PT(0.017)S(0.021)T(0.007)EK 125.5 7.6548e-07 444387500.0 19869.7 19845.35 19502.07 20711.600000000002 22207.2 21571.800000000003 21562.7 21192.4 20140.399999999998 21637.0 21978.7 True False 21886.857316699978 21517.787291761873 20825.597745673742 21990.908492543556 20647.442882680967 21396.126412907484 22383.280348062177 20769.700956883808 19293.969028127638 20270.83612740647 19275.459234458536 1.1354778659474465 1.1163307203231116 1.0804203154051988 1.1408759825151475 1.0711777411647734 1.110019022252806 1.1612320140237085 1.0775204213943723 1.0009602777004665 1.0516395942032088 1.0 14.234477612057255 -8.65302358174903 3.660933319715047 1.0002228415228074 1.1143919792770727 0.6811440772052725 0.028866837822593167 0.06320735435486596 1.630331322611296 0.0039946609127609264 0.0045080300269346495 2.223189170461225e-09 8.65302358174903 0.11416913775426529 RPSGRS(ph)PTSTEKR ddPTM_A549_PD325901_60min_R1 1 RPSGRSPTSTEKR 13 3 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RPS(0.264)GRS(0.719)PT(0.006)S(0.006)T(0.006)EKR 46.926 0.010502 10628000.0 618.4 645.34 881.6 801.34 1000.9 1110.3 639.04 719.16 797.95 688.93 850.78 True False 681.179512757981 699.725066620927 941.4306774914645 850.8369518248157 930.6002369175488 1101.2580849187918 663.359016896106 704.8157896298943 764.414936445872 645.4308422264703 746.1394535387738 0.9129386062180439 0.9377939516564717 1.2617355549642468 1.1403189414384738 1.2472202515279396 1.4759413668527637 0.8890550067416239 0.9446167017266136 1.0244933876910296 0.8650270926772939 1.0 9.543301485304214 RPSGS(ph)LGK ddPTM_A549_MK2206_60min_R1 4 RPSGSLGK 8 1 Q9NZH0;Q9NZH0-2 Q9NZH0 GPRC5B G-protein coupled receptor family C group 5 member B 1 RPS(0.013)GS(0.987)LGK;RPS(0.006)GS(0.994)LGK;RPS(0.125)GS(0.875)LGK;RPS(0.071)GS(0.929)LGK 71.153 0.0026183000000000005 132244000.0 19991.300000000003 20601.899999999998 20287.4 18451.9 27785.7 21722.8 20510.6 24186.999999999996 29487.7 31269.8 30877.0 True False 23365.342699640896 21650.448712170353 23164.458379347543 22972.616328337255 23698.460337494227 24021.492277572368 24237.110526493303 27615.58131958091 22808.783032180785 24205.930462180728 23209.38873815241 1.0067194342448202 0.9328314914464155 0.9980641300246306 0.9897984211266219 1.0210721447626006 1.0349903027857426 1.044280433230518 1.189845266117907 0.9827394977743168 1.0429370086076488 1.0 14.502420906710567 -6.348747632083557 1.9539592502492134 1.015713063910434 0.9716376960464003 0.10048804357360164 0.057970511307661496 0.7472845225303383 5.479739550244406 0.009122181761038487 0.02806536794595962 4.4797354535724335e-07 6.348747632083557 -0.044075367864033654 RPSGS(ph)LGK ddPTM_A549_PD325901_60min_R1 4 RPSGSLGK 8 1 Q9NZH0;Q9NZH0-2 Q9NZH0 GPRC5B G-protein coupled receptor family C group 5 member B 1 RPS(0.091)GS(0.909)LGK;RPS(0.062)GS(0.938)LGK;RPS(0.002)GS(0.998)LGK;RPS(0.201)GS(0.799)LGK 73.666 0.0021620000000000003 230928000.0 19709.4 22046.3 20118.300000000003 22139.0 23433.7 20725.1 20251.5 22950.899999999998 19832.5 24491.5 20940.9 True False 21710.283778706602 23904.21907249657 21483.64881916576 23506.47574868296 21787.79775387628 20556.321656984997 21022.18191454603 22493.12629486726 18999.008994376552 22945.10251025446 18365.302055302323 1.1821359492662706 1.301596837368383 1.1697955609155433 1.2799395119067103 1.1863566244795758 1.1193021271899035 1.144668454199294 1.2247621208262771 1.0345056638418462 1.2493724547062313 1.0 14.164695003912138 -8.520819651243599 0.5730453380492407 0.9973956269412088 1.2327008596818783 0.0 0.09318396827261816 0.25938049726960194 0.1869518664819302 0.016592935708238835 0.019334387942009514 3.0142574900796257e-09 8.520819651243599 0.2353052327406695 RPSLPSSPS(ph)PGLPK ddPTM_A549_MK2206_60min_R1 1 RPSLPSSPSPGLPK 14 1 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 RPS(0.039)LPS(0.033)S(0.034)PS(0.894)PGLPK 46.543 0.013969 4314900.0 1365.1 1433.7 1437.5 1281.6 1947.5 1454.7 1550.2 1624.5 2202.2 1916.3 2029.9 True False 1595.4955065093206 1506.6692061721799 1641.3591155255017 1595.5920575332095 1661.0253298376492 1608.6353884482912 1831.8512738861812 1854.7778498225985 1703.4052161907678 1483.4064990718489 1525.8198076100523 1.045664434654577 0.9874489757294024 1.0757227736454824 1.0457277127844107 1.0886117230575045 1.05427612122034 1.200568549936101 1.2155942927021017 1.1163868811343287 0.9722029375115815 1.0 10.57536888116154 -5.809569087468845 10.641513075367442 1.0790424693551626 1.0166125698094912 0.1167049023665867 0.07134555338158752 0.850101973013228 184.47806136050554 0.01068089283375075 0.03334430326324433 1.5503541371876118e-06 5.809569087468845 -0.06242989954567135 RPSLPSSPS(ph)PGLPK ddPTM_A549_PD325901_60min_R1 2 RPSLPSSPSPGLPK 14 1 H3BQC4;O43294-2;O43294;H3BSN4 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 RPS(0.019)LPS(0.052)S(0.243)PS(0.686)PGLPK;RPS(0.031)LPS(0.018)S(0.049)PS(0.903)PGLPK 65.949 0.0018584 15710200.0 4238.8 4042.3 4321.799999999999 4236.6 3874.6 4279.3 4721.7 4688.8 4115.5 4355.1 4676.5 True False 4669.119855560366 4382.958807453084 4615.1033370946125 4498.2851599832975 3602.4614626443554 4244.450799597392 4901.386877313379 4595.278205707556 3942.539847036764 4080.118242753985 4101.320146775985 1.138443156950506 1.0686702453351495 1.1252726370855266 1.0967895699435615 0.8783663146794871 1.0348986784008851 1.1950754152090077 1.120438795620446 0.961285563170669 0.994830468419134 1.0 12.00187264869756 -2.0000000000000053 0.13774603478064365 0.9586963719043419 1.5267981542438311 0.11873441848802024 0.08240549315657124 87.27394574085012 0.7695063502675681 0.20796057130118425 9.807243929078345 0.009999999999999877 2.0000000000000053 0.5681017823394893 RPSNST(ph)PPPTQLSK ddPTM_A549_PD325901_60min_R1 1 RPSNSTPPPTQLSK 14 1 E9PFR3;Q14738-2;Q14738 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 1 RPS(0.175)NS(0.34)T(0.485)PPPTQLSK 58.711999999999996 0.0028442 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RPSRPS(ph)NSNISK ddPTM_A549_PD325901_60min_R1 1 RPSRPSNSNISK 12 2 Q6P158-2;Q6P158 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 RPS(0.196)RPS(0.789)NS(0.015)NISK 71.279 0.00053107 5700700.0 1302.0 1371.5 1277.7 1676.1 1718.7 1294.5 1401.6 1592.1 1211.9 2003.0 1955.5 True False 1434.1780815182583 1487.0811182796676 1364.4124054342615 1779.6288903007123 1597.9844411931174 1283.9580211901075 1454.9386549849498 1560.3443165217116 1160.9680574957733 1876.530238165881 1714.9858969358381 0.8362623180054725 0.8671098234315702 0.795582288969288 1.0376930174646752 0.9317770158041725 0.7486697257885052 0.8483677082035985 0.9098292407591081 0.6769548715065661 1.0941957257600041 1.0 10.74398099720922 -5.238336009759537 18.581976537414885 0.8574092567224945 0.8362617083300699 0.0 0.12268477792380382 1844.6990487291669 1482840.6679525075 0.017291944373817796 0.7097077450520459 5.776489526389632e-06 5.238336009759537 -0.02114754839242461 RPSRS(ph)PPSLALR ddPTM_A549_MK2206_60min_R1 1 RPSRSPPSLALR 12 2 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 RPS(0.285)RS(0.715)PPSLALR 80.74600000000001 0.00016282 15446000.0 153.79 183.6 303.52 162.66 318.69 231.82 185.38 163.78 87.976 333.86 418.98 True False 179.74599219549364 192.94445578099484 346.56369999603515 202.51170730208491 271.8111231660901 256.3510385303381 219.06114640241273 186.99631655521412 68.0495764688035 258.44079412416 314.93570274026285 0.5707386956496822 0.6126471343267234 1.1004268394487393 0.6430255621703918 0.8630686225824993 0.8139789687222558 0.695574190212023 0.5937602975088402 0.21607450624588623 0.8206144678912574 1.0 8.298913507891417 -8.007445038069177 4.297083424002278 0.6173750368769912 0.7736422823378427 0.039643118048496184 0.22361430653771314 0.5449736223343719 24.401805937331854 0.048808601656423166 0.0659841094180666 9.830032686378233e-09 8.007445038069177 0.15626724546085147 RPSRS(ph)PPSLALR ddPTM_A549_PD325901_60min_R1 1 RPSRSPPSLALR 12 2 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 RPS(0.268)RS(0.732)PPSLALR 63.185 0.001471 18413000.0 250.62 290.13 367.43 292.71 254.85 287.98 123.92 320.62 296.01 351.37 386.58 True False 276.0627579033073 314.58027331132337 392.366009336081 310.7900319073574 236.95021518477094 285.63478635946484 128.6358434116259 314.2249825784758 283.56972910250346 329.1844382348206 339.0331107325266 0.8142648878949804 0.9278747808189897 1.1573088200392034 0.9166952196375562 0.6988999235880181 0.8424982024390257 0.3794197066289215 0.926826827915275 0.8364071830323975 0.9709507060345032 1.0 8.405282366844137 -3.291222755127161 13.979030689724366 0.8808267334039133 0.7576542832125482 0.0 0.18991913124878826 0.0 0.0 0.02516343348169178 0.0 0.0005114194547566241 3.291222755127161 -0.12317245019136502 RPSRS(ph)QEGLRPR ddPTM_A549_MK2206_60min_R1 3 RPSRSQEGLRPR 12 3 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 RPS(0.02)RS(0.98)QEGLRPR;RPS(0.007)RS(0.993)QEGLRPR;RPS(0.042)RS(0.958)QEGLRPR 81.703 0.00020967 447275500.0 2905.88 2531.53 2200.6 1840.77 2242.79 2046.02 1964.54 2151.81 2555.0299999999997 3353.9 3319.8 True False 3396.32150205502 2660.3740639611215 2512.678170174206 2291.758732635305 1912.8785620059475 2262.5284783618413 2321.471488582349 2456.8356571417467 1976.3197845445015 2596.2516606152863 2495.4020381811197 1.3610317897033435 1.0661103995491839 1.0069231858148513 0.9183925866734288 0.7665612725876552 0.9066789414065646 0.930299588227656 0.9845450230266367 0.7919845196508001 1.0404141781128282 1.0 11.285056553837364 -5.077647732618952 1.1494827781259873 0.900177162341006 1.7288984195748835 0.7155748166629714 0.08039042552663227 0.9136513125698806 0.7438145654731836 0.012680599789356442 1.0018226449698469 8.362810722040755e-06 5.077647732618952 0.8287212572338776 RPSRS(ph)QEGLRPR ddPTM_A549_PD325901_60min_R1 1 RPSRSQEGLRPR 12 3 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 RPS(0.138)RS(0.862)QEGLRPR 97.417 7.4774e-05 388340000.0 2389.8 2164.9 2446.8 1908.8 2391.9 2131.7 1842.3 1952.7 1966.7 1986.4 2377.7 True False 2632.4107367222236 2347.34372071721 2612.8545618036715 2026.702240800669 2223.901195607037 2114.3401419628813 1912.409734645243 1913.7518666364842 1884.0464383834794 1860.9783649988553 2085.2579734821484 1.2623909224652867 1.125685047398432 1.2530126224337106 0.9719191901308509 1.066487323817 1.0139465566613655 0.9171094219348467 0.9177530506888468 0.9035076054582023 0.8924451500315949 1.0 11.026010159478721 -6.380195282703937 0.8959304130679054 0.9495909962763203 1.2416016390119589 0.7582621232617952 0.06272308951842441 0.2799017525259729 0.37017863951151525 0.010002776216304762 0.05449564449963672 4.1668197818680647e-07 6.380195282703937 0.2920106427356386 RPSS(ph)PVISK ddPTM_A549_MK2206_60min_R1 5 RPSSPVISK 9 1 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 RPS(0.05)S(0.949)PVIS(0.001)K;RPS(0.036)S(0.961)PVIS(0.004)K;RPS(0.198)S(0.802)PVISK;RPS(0.289)S(0.708)PVIS(0.002)K;RPS(0.111)S(0.889)PVISK 75.695 0.001058 200777600.0 15185.599999999999 14910.5 15764.199999999999 13857.400000000001 20038.399999999998 15963.899999999998 15765.400000000001 14974.800000000001 22118.899999999998 23963.899999999998 24559.700000000004 True False 17748.558027725398 15669.380762105242 17999.80060449887 17252.463622082323 17090.77790470796 17653.189302020815 18629.76910935699 17097.52375840165 17109.004466625192 18550.438346348623 18460.848676762693 0.9614161482221627 0.8487898382390638 0.9750256296264341 0.934543363859463 0.9257850602621922 0.9562501492275105 1.009150198647526 0.9261504743236909 0.9267723692552058 1.0048529550918588 1.0 14.172181257214229 RPSS(ph)PVISK ddPTM_A549_PD325901_60min_R1 1 RPSSPVISK 9 1 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 RPS(0.226)S(0.774)PVISK 79.88600000000001 0.00071818 179810000.0 7096.2 7372.8 7735.5 6902.2 8052.6 8081.6 8418.9 8298.6 7404.8 7683.9 7439.6 True False 7816.601000053668 7994.131730843853 8260.477547340324 7328.533217966456 7487.013155961887 8015.786129045941 8739.285846498851 8133.077912874236 7093.602006885639 7198.737242657425 6524.576363510027 1.198024295304373 1.2252338367212012 1.2660557693122676 1.1232197785212104 1.147509468635309 1.2285527339178368 1.3394411161121544 1.246529653382566 1.0872126574466965 1.1033263834442608 1.0 12.671668516137023 -8.94797798822076 2.747492137667545 1.0343603057769675 1.2216345660713939 0.5736860992049597 0.06007749310801558 0.11877592440694444 1.7604212736963207 0.011871862396542348 0.012172062386803286 1.1272545884932938e-09 8.94797798822076 0.1872742602944264 RPSSMYS(ph)TGGK ddPTM_A549_PD325901_60min_R1 1 RPSSMYSTGGK 11 1 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 RPS(0.026)S(0.026)MY(0.011)S(0.912)T(0.026)GGK 41.644 0.022982 6177200.0 2144.0 2177.8 2310.8 1884.3 2381.2 2153.6 2358.2 1979.9 2112.6 2528.0 2772.0 True False 2361.6573016706197 2361.330848989764 2467.624783969236 2000.6889314442064 2213.9527266940413 2136.0617956238048 2447.9425914565536 1940.4093412984962 2023.8147687643955 2368.38164856882 2431.0615731557873 0.9714510433419121 0.9713167593383886 1.0150400184089068 0.8229692548869054 0.9106938101201959 0.8786539260093523 1.0069438875951022 0.7981736714219171 0.8324819046591484 0.9742170559235972 1.0 11.247370718613489 -6.2306230747641305 24.75678473073875 0.907704331510197 0.9844740246591749 0.2294855867164638 0.0672554149502609 877.3635830206296 704843.1668148977 0.010774744821593888 0.028503680615156637 5.879994572945796e-07 6.2306230747641305 0.07676969314897786 RPST(ph)ADGEGDERPFTQAGLGADER ddPTM_A549_PD325901_60min_R1 1 RPSTADGEGDERPFTQAGLGADER 24 2 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 RPS(0.171)T(0.829)ADGEGDERPFTQAGLGADER 210.68 2.2285999999999994e-74 27194000.0 1744.9 1800.5 1870.4 1615.7 1771.2 1925.1 1748.5 2115.6 1833.8 2042.7 2255.1 True False 1922.0409634725113 1952.2344538552984 1997.3365916288974 1715.4981194790653 1646.797022308285 1909.4226238648698 1815.0401243159124 2073.4026983439076 1756.7317632112788 1913.723573390638 1977.7369962567159 0.9718385038609173 0.9871051901998666 1.0099101121176768 0.8674045753940018 0.8326673493114582 0.9654583129500306 0.9177358403828509 1.04837129621798 0.8882534768456392 0.9676329951923655 1.0 10.949634870807623 -11.151796156564414 1.5324155380249107 1.0000119326608752 0.93598048312962 0.04322655935358044 0.0615877405905014 0.715036732753893 3.009715436843983 0.04601877043145037 0.009799343213088774 7.050239061733689e-12 11.151796156564414 -0.06403144953125517 RPSTSQTVST(ph)PAPVPVIESTEAIEAK ddPTM_A549_MK2206_60min_R1 2 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.118)T(0.118)S(0.118)QT(0.101)VS(0.12)T(0.424)PAPVPVIESTEAIEAK;RPS(0.004)T(0.004)S(0.004)QT(0.003)VS(0.02)T(0.963)PAPVPVIESTEAIEAK 119.18 2.3758000000000003e-17 20456900.0 1798.8 2301.2 1916.06 2214.05 2954.8999999999996 2332.12 1622.3000000000002 2579.3 3116.6000000000004 2980.2 3102.0 True False 2102.3934635623523 2418.321250780095 2187.7861195782916 2756.492349392481 2520.2381243323607 2578.9033904640323 1917.0509106086652 2944.923673774967 2410.6950761875187 2306.970750161209 2331.6877891553177 0.901661651847467 1.037154829230444 0.9382843319563139 1.182187581979427 1.080864314705421 1.1060243152871987 0.8221730711653897 1.2630008560630672 1.0338841621076647 0.9893995074687667 1.0 11.187158910596835 -4.58755151036937 1.3627509168324716 1.0376473039705991 0.4096581345959026 0.11605853615263184 0.11212568171644231 11.809475003152624 5.056799554849193 0.014757788334011177 16.086970170748465 2.5849282307745563e-05 4.58755151036937 -0.6279891693746965 RPSTSQTVST(ph)PAPVPVIESTEAIEAK ddPTM_A549_PD325901_60min_R1 2 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.001)T(0.001)S(0.001)QT(0.003)VS(0.044)T(0.95)PAPVPVIESTEAIEAK;RPS(0.001)T(0.001)S(0.001)QT(0.003)VS(0.134)T(0.861)PAPVPVIESTEAIEAK 128.43 6.7128e-24 18666300.0 2540.0 3442.0 2979.2 3787.4 4267.1 3593.0 4096.1 3746.8 3987.8 4040.6 4333.6 True False 2797.8589301508296 3732.0694197000525 3181.38642738495 4021.3390961905143 3967.3936166958465 3563.7397992553547 4251.979326971926 3672.0671346922636 3820.206633948052 3785.475826426891 3800.5946729537936 0.7361634614870295 0.9819698602059862 0.8370759581453605 1.0580815483449488 1.0438875907838965 0.9376795227904803 1.118766849101359 0.9661822558516509 1.0051602348268873 0.9960219787091497 1.0 11.892009457059965 -4.430818779532879 0.8482500876899542 1.0072537759151492 1.5647734288634997e-18 0.568314033877299 0.0662093143735068 3.939256219625575 0.7476562648145684 0.008984501040403181 5.200430623858193 3.7083543005894654e-05 4.430818779532879 -1.0072537759151492 RPSVASS(ph)VSEEYFEVR ddPTM_A549_PD325901_60min_R1 2 RPSVASSVSEEYFEVR 16 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RPSVAS(0.104)S(0.893)VS(0.003)EEYFEVR;RPS(0.02)VAS(0.037)S(0.943)VS(0.001)EEYFEVR 175.59 1.2306999999999999e-28 17577000.0 2937.1000000000004 2521.3900000000003 2633.2 2819.3 3078.8 3143.7 3030.9 2669.1000000000004 2476.6 3120.1 3366.3 True False 3235.2722298212575 2733.876384118974 2811.9047867179293 2993.4417579051374 2862.5557092833947 3118.0987494904125 3146.2425580721206 2615.8627066315566 2372.5171146084926 2923.0963535204046 2952.2664407338825 1.0958605175950937 0.9260263052136241 0.9524563054068176 1.0139470193486395 0.9696129284902255 1.0561711864716745 1.0657041365446742 0.8860523801440151 0.8036256761495841 0.9901194259396768 1.0 11.52760721452222 -8.276984414915221 24.59524941632255 0.9030854799937768 1.0060595755641684 0.2774595882436327 0.06872327726519527 688.3257621752988 1089061.6187928093 0.013733096502993 0.01663064492321735 5.284642158932408e-09 8.276984414915221 0.10297409557039161 RPSVASSVS(ph)EEYFEVR ddPTM_A549_PD325901_60min_R1 1 RPSVASSVSEEYFEVR 16 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RPS(0.003)VAS(0.02)S(0.127)VS(0.85)EEYFEVR 88.396 5.2023e-06 4066300.0 1472.9 1271.1 1154.1 1190.2 1505.5 1524.8 1568.9 1410.2 1196.1 1125.4 1677.0 True False 1622.427723708329 1378.220057925838 1232.4241661670828 1263.7159508596797 1399.758873693045 1512.3825343458286 1628.6053480350217 1382.0724547195016 1145.8320765497936 1054.3420519380345 1470.73963137888 1.1031372848688623 0.9370931662687971 0.8379621653437281 0.8592383885616063 0.9517380533090771 1.0283142590833068 1.107337636987545 0.9397125264270949 0.7790856057067885 0.7168787931209447 1.0 10.522326150040621 -8.530697586124765 24.744816179975757 0.8937698294780893 0.9691378296937481 0.19784294691860416 0.10740712873116474 328.50479551924866 1039636.4457709598 0.019366730950876297 0.02198070382145325 2.946472647765711e-09 8.530697586124765 0.07536800021565881 RPT(ph)GDFGFSLR ddPTM_A549_MK2206_60min_R1 2 RPTGDFGFSLR 11 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RPT(1)GDFGFSLR;RPT(1)GDFGFSLR 92.06299999999999 0.00018179 4327200.0 583.97 519.9100000000001 597.0899999999999 314.11 1002.48 642.1500000000001 515.46 680.03 774.1800000000001 629.54 1038.65 True False 682.5298593042622 546.3711982848421 681.7663403750418 391.066964100934 855.0165199772258 710.1018867753282 609.1124097776875 776.4263350045319 598.8294661114205 487.32647676548135 780.7245397183016 0.8742262149855445 0.699825829071521 0.8732482529895044 0.5009026157190313 1.0951577367937353 0.9095421632725222 0.7801886309318078 0.9944945950907083 0.767017604349273 0.6241977188795895 1.0 9.608669806923468 -14.999999994115655 0.306129744084488 2.5854884868395933 0.8135580398357868 0.0 0.1864476940039439 62.25642882695659 0.8234187238325803 61.27513165488528 0.05006448114365006 1.0000000135492062e-15 14.999999994115655 -1.7719304470038066 RPT(ph)GDFGFSLR ddPTM_A549_PD325901_60min_R1 2 RPTGDFGFSLR 11 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RPT(1)GDFGFSLR;RPT(1)GDFGFSLR 108.71 7.1167e-05 7280000.0 516.66 745.62 665.9 778.2 872.41 782.54 652.8199999999999 788.85 1093.33 770.51 894.34 True False 569.1109428550102 808.4560141536178 711.0919783819945 826.2676465795688 811.1349312511121 776.16725369031 677.6634223368112 773.1157679091463 1047.3811422574913 721.859867103941 784.3418496883642 0.7255904336624779 1.0307444572476079 0.9066097629044358 1.053453474282754 1.0341599540728235 0.9895777638267012 0.8639898822255391 0.9856872589628128 1.3353630724583143 0.9203383287411624 1.0 9.615338769318015 -8.553626033705159 23.40468103729696 1.158479685626955 0.9527356939322221 0.11369546353289461 0.13447876673041192 88.91583447299861 67681.69719540063 0.024014691145143176 0.027230336536111874 2.7949495062210707e-09 8.553626033705159 -0.2057439916947329 RPT(ph)LGVQLDDK ddPTM_A549_PD325901_60min_R1 1 RPTLGVQLDDK 11 1 Q13769;H7C072 Q13769 THOC5 THO complex subunit 5 homolog 1 RPT(1)LGVQLDDK 62.357 0.00451 2568500.0 1003.2 1448.2 1352.6 1112.8 1678.4 1219.2 1293.9 1118.8 1073.4 1375.0 1585.4 True False 1105.0441254831928 1570.244896458343 1444.3955698445495 1181.5351286478337 1560.5149741656635 1209.2712394244718 1343.1400725492472 1096.4846563183796 1028.2887308490501 1288.182265341031 1390.405850678638 0.7947637194879725 1.129342843092848 1.0388301869842966 0.8497771554047638 1.122344942236828 0.8697253674775917 0.9660057686708373 0.7886076254520941 0.7395601294018984 0.9264793187631417 1.0 10.44129034264575 -7.635275722983456 2.1224936254583233 0.8696805845752367 0.9887151540965097 0.14002540510952333 0.11842949490664724 0.47712667758026994 4.375034708468406 0.021069709395298918 0.03329800255930458 2.3159238595105525e-08 7.635275722983456 0.119034569521273 RPT(ph)LGVQLDDKR ddPTM_A549_MK2206_60min_R1 1 RPTLGVQLDDKR 12 2 Q13769;H7C072 Q13769 THOC5 THO complex subunit 5 homolog 1 RPT(1)LGVQLDDKR 70.529 0.0010397 1711100.0 370.01 387.8 353.28 436.76 391.81 402.4 404.75 329.08 570.28 622.92 438.18 True False 432.4586421240303 407.5373635722758 403.3804162315476 543.7662196069014 334.17526802756845 444.98170090849817 478.2878358311394 375.72809776523314 441.112490550028 482.20193936327104 329.36781284722025 1.3129960647509582 1.2373320879454457 1.2247110995592598 1.650939157977563 1.0145960078454241 1.3510175662334871 1.4521389679719456 1.1407553595393898 1.3392701816757102 1.4640226535643421 1.0 8.363555765741875 -10.839794488087454 0.6782452816216431 0.9571163989795084 1.307395800133874 0.0 0.20811137638347216 0.8885929827510335 0.5763806553553511 0.18725057421038221 0.028856128459118773 1.4461239272336246e-11 10.839794488087454 0.3502794011543655 RPT(ph)LQAVR ddPTM_A549_MK2206_60min_R1 2 RPTLQAVR 8 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 RPT(1)LQAVR;RPT(1)LQAVR 117.02 0.00078582 20362900.0 954.72 1240.25 948.0999999999999 905.25 1598.1799999999998 1104.77 698.05 1016.99 1590.1 1871.33 1826.21 True False 1115.8533953370288 1303.3734274639373 1082.554836472855 1127.0362906382172 1363.0898390962448 1221.6760281130255 824.8766492944446 1161.1514469012536 1229.944888867924 1448.5952533048705 1372.7116561680639 0.8128825819487415 0.9494881329283057 0.7886250776764115 0.8210291546473413 0.9929906495449463 0.8899727940850626 0.6009103554908937 0.8458815379645115 0.8959965360105745 1.0552800705055834 1.0 10.42281289783552 -9.65651808536444 1.025423770264815 0.9810876049200445 0.8419729340035709 0.3248120351179865 0.09860214504703924 0.45710110026914197 0.9968065267813727 0.029406597489976895 0.01959469434835006 2.2053722959622656e-10 9.65651808536444 -0.13911467091647367 RPT(ph)LQAVR ddPTM_A549_PD325901_60min_R1 2 RPTLQAVR 8 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 RPT(1)LQAVR;RPT(1)LQAVR 122.69 0.00071279 38218000.0 1785.67 1802.3700000000001 2087.76 1860.22 2589.7 2112.16 2516.6000000000004 2306.7 2390.5299999999997 2706.0 3111.9 True False 1966.9499038592246 1954.262045318065 2229.447948320759 1975.1215645338534 2407.8084059799926 2094.9592692444166 2612.370590136362 2260.6910589288555 2290.064337392007 2535.1426981911495 2729.1560279594146 0.720717278055337 0.7160682735971177 0.8169001425644813 0.7237114860049422 0.8822538474578556 0.7676216558460435 0.9572082223857413 0.8283480445121968 0.8391108144536112 0.9289108692281957 1.0 11.414239161622463 -14.99999999999837 0.03234857468142849 2.123863205840163 0.07203428964940566 0.6262908175061772 0.05762133898722601 347.34532449333267 0.8678951721402534 43.87705298401347 17.047321945191612 1.0000000000037549e-15 14.99999999999837 -2.0518289161907575 RPT(ph)SLPLNTK ddPTM_A549_PD325901_60min_R1 1 RPTSLPLNTK 10 1 Q13873 Q13873 BMPR2 Bone morphogenetic protein receptor type-2 1 RPT(0.5)S(0.5)LPLNTK 59.185 0.005991600000000001 5046400.0 2114.5 2542.2 2464.4 2397.7 2658.1 2279.9 2067.7 2709.4 2111.2 2446.8 2513.9 True False 2329.1624833873725 2756.440115851676 2631.649003641069 2545.800483428208 2471.404225947182 2261.333250298435 2146.3874549888556 2655.358891516817 2022.4736058957642 2292.3086304265 2204.706236925085 1.0564502627959484 1.2502527863739785 1.1936506367902526 1.154711879882396 1.1209675849577414 1.025684607057822 0.9735480487334373 1.2044048531473561 0.917343803914901 1.039734270277928 1.0 11.10637072331783 -7.49339681552232 0.6972471556146842 0.9684514109088632 1.1829066071386944 0.3045982754833745 0.08476732352907959 0.4229663458295484 0.40823450910877723 0.016911444447886868 0.03929377393120333 3.2107255532197156e-08 7.49339681552232 0.21445519622983122 RPTETNPVTS(ph)NSDEECNETVKEK ddPTM_A549_PD325901_60min_R1 1 RPTETNPVTSNSDEECNETVKEK 23 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RPTETNPVT(0.002)S(0.568)NS(0.43)DEECNETVKEK 113.6 9.4397e-13 7116500.0 871.31 955.13 1013.9 980.03 1139.5 1021.7 854.14 1365.5 879.8 1066.3 1314.4 True False 959.7647497754797 1035.622157129027 1082.709351075994 1040.5642272903806 1059.4654510615908 1013.3796139435549 886.6447651033425 1338.2640312859726 842.825065586914 998.9736360241038 1152.7371326680973 0.8325963678761971 0.8984027041204106 0.9392508668216328 0.9026899522893966 0.9190867727227438 0.8791072875374554 0.7691647470843037 1.160944671044351 0.7311511373248918 0.86661009497621 1.0 10.170847846538987 RPTETNPVTSNS(ph)DEECNETVKEK ddPTM_A549_MK2206_60min_R1 4 RPTETNPVTSNSDEECNETVKEK 23 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RPTETNPVTS(0.002)NS(0.997)DEECNETVKEK;RPTETNPVTS(0.001)NS(0.999)DEECNETVKEK;RPTETNPVTS(0.004)NS(0.996)DEECNETVKEK;RPTETNPVTS(0.004)NS(0.996)DEECNETVKEK 248.73 1.1737999999999996e-110 314940000.0 17184.8 19024.3 17576.7 13691.1 23755.199999999997 18760.9 15882.0 15086.6 24732.0 26173.8 25657.4 True False 20085.174111978147 19992.555610644762 20069.34035885712 17045.420114616834 20260.841548323162 20746.16598552247 18767.55382006215 17225.171750774778 19130.24148888842 20261.12040150642 19285.959471783903 1.0414402322769332 1.036637852521397 1.0406192332934918 0.883825362152966 1.0505487983610848 1.0757134492517682 0.9731200486820373 0.8931456988684366 0.9919258368699102 1.050563257231211 1.0 14.235263301028258 RPTETNPVTSNS(ph)DEECNETVKEK ddPTM_A549_PD325901_60min_R1 6 RPTETNPVTSNSDEECNETVKEK 23 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 RPTETNPVTS(0.011)NS(0.989)DEECNETVKEK;RPTETNPVTSNS(1)DEECNETVKEK;RPTETNPVTS(0.04)NS(0.96)DEECNETVKEK;RPTETNPVTSNS(1)DEECNETVKEK;RPTETNPVTS(0.001)NS(0.999)DEECNETVKEK;RPTETNPVTSNS(1)DEECNETVKEK 265.57 3.107399999999999e-124 605489000.0 29834.199999999997 32025.9 33903.5 33438.5 33284.00000000001 34945.2 31363.5 36726.4 31227.0 35004.2 37005.299999999996 True False 32862.94602122277 34724.83498790584 36204.395388307494 35503.9202006565 30946.246663566486 34660.61787724411 32557.055155265738 35993.86314069655 29914.637784817663 32794.02883814586 32453.88269592418 1.012604449493187 1.0699747488847262 1.115564375687299 1.0939806658361826 0.9535452800368002 1.0679960299972697 1.003179048260827 1.1090772551913164 0.9217583629392542 1.0104809074898269 1.0 14.986103468284332 -8.767325367454976 24.999989738612705 0.9630525604530347 1.052733524227283 0.2944085940091856 0.05097053541318406 107.6192667836558 457097.0899579275 0.009003624683209338 0.009707373029565898 1.7087346749051511e-09 8.767325367454976 0.08968096377424839 RPTGDFGFS(ph)LR ddPTM_A549_MK2206_60min_R1 2 RPTGDFGFSLR 11 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RPTGDFGFS(1)LR;RPTGDFGFS(1)LR 47.915 0.013078 2053000.0 346.09000000000003 352.79 588.41 520.7 582.5799999999999 466.69 489.94 542.57 914.04 615.81 881.9200000000001 True False 404.50153091188247 370.74550411207616 671.85538585486 648.2715233751114 496.88325373905906 516.0748260362502 578.9557561139179 619.4809590509376 707.0113994219461 476.6980933013806 662.914924246247 0.6101861884793318 0.5592655868075745 1.0134865897291097 0.9779105880173304 0.74954301911973 0.778493298552664 0.8733485021056163 0.934480332835024 1.066519056311544 0.7190939227132348 1.0 9.372679922490311 -4.2947238570639685 0.2722861166076777 1.0389756614390016 2.7583535284367843e-15 0.15428179430209776 0.15037445285963078 8.579332541360722 0.30854265177000084 0.05608506945210195 3.2832825201678406 5.073131770777446e-05 4.2947238570639685 -1.0389756614389989 RPTGDFGFS(ph)LR ddPTM_A549_PD325901_60min_R1 2 RPTGDFGFSLR 11 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RPTGDFGFS(1)LR;RPTGDFGFS(1)LR 70.889 0.0011718 5113100.0 540.61 495.64 391.51 383.11 662.48 472.5 514.86 486.90000000000003 569.81 567.38 509.79 True False 595.4923292239527 537.4093222487312 418.08022294088425 406.77383459406144 615.9496902319287 468.6521166568759 534.4532790422023 477.1883975343396 545.8628672676512 531.5555299703235 447.08906182506826 1.3319322257473387 1.2020184972876888 0.9351161963887763 0.9098273013738348 1.3776890173012781 1.0482298867786761 1.1954067425861492 1.067322907848388 1.2209264638221677 1.188925373840401 1.0 8.804418440097763 -11.029157930828534 1.3164359821195228 0.9998819916050005 1.144961656475209 0.0 0.15031183401479176 0.7698431365730575 2.373884448490344 0.09918127937506442 0.02223471733859129 9.350655764909893e-12 11.029157930828534 0.1450796648702085 RPTGDFGFS(ph)LRR ddPTM_A549_MK2206_60min_R1 4 RPTGDFGFSLRR 12 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RPTGDFGFS(1)LRR;RPTGDFGFS(1)LRR;RPTGDFGFS(1)LRR;RPTGDFGFS(1)LRR 78.932 0.00019433 15547900.0 1461.02 1811.21 1655.16 1250.4399999999998 1890.0300000000002 1495.3799999999999 1419.22 1375.31 2313.43 2584.08 2284.0 True False 1707.604457490476 1903.3928526965988 1889.8865764543943 1556.797856134384 1612.0090907076005 1653.6201190470915 1677.0739033187635 1570.2644042102306 1789.441798788579 2000.3345332784968 1716.8197648068187 0.99463233852193 1.108673660284179 1.1008066281593918 0.9067916668058391 0.9389506829734036 0.9631879553956332 0.976849135650225 0.9146355583732 1.042300324979036 1.1651395063613914 1.0 10.745522874923589 -6.227939960060766 24.98990276846698 0.9938620255778636 1.072101160480363 0.18916246978235685 0.07260514109680795 664.4827861078944 495690.5149542079 0.007965065732073 0.02107207320504407 5.916434214908676e-07 6.227939960060766 0.07823913490249934 RPTGDFGFS(ph)LRR ddPTM_A549_PD325901_60min_R1 2 RPTGDFGFSLRR 12 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RPTGDFGFS(1)LRR;RPTGDFGFS(1)LRR 56.599 0.0052582 6418300.0 1328.9 1468.0900000000001 1442.23 1389.75 1561.1999999999998 1573.59 1664.1100000000001 1395.9099999999999 1508.0900000000001 1917.6 1865.0099999999998 True False 1463.808949715526 1591.8110965623034 1540.108400633524 1475.5917011487477 1451.5466978476131 1560.775204762101 1727.4386166859322 1368.0674799797894 1444.7102218242449 1796.5224087403371 1635.6255932724644 0.8949535613384616 0.9732123923162027 0.9416020432598912 0.9021573807710295 0.887456581639471 0.9542374557978107 1.0561332763384887 0.83641848452777 0.883276850011715 1.0983701992250927 1.0 10.675626827228381 -11.01361079687102 1.3378630824240731 0.9994508581512193 0.9227957985120288 0.30638083228463 0.0630001191146947 0.5659179957021939 1.8248166323367423 0.03838282756839916 0.00897102113802934 9.691459899862595e-12 11.01361079687102 -0.0766550596391905 RPTLAWLEDSSSCS(ph)DIPK ddPTM_A549_PD325901_60min_R1 1 RPTLAWLEDSSSCSDIPK 18 1 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 RPTLAWLEDS(0.184)S(0.252)S(0.252)CS(0.311)DIPK 55.126999999999995 0.0044217 1098600.0 1039.9 1183.2 1246.5 1214.3 1063.1 1461.3 1342.0 1528.6 1242.2 957.29 1319.3 True False 1145.4698824660807 1282.912416440762 1331.0949858134204 1289.304553124608 988.4315234958992 1449.3996572924702 1393.0705443705772 1498.1108738364974 1189.9946538668619 896.8465460278666 1157.0344637317564 0.990004981158144 1.1087936069795314 1.1504367653148988 1.114318193224983 0.8542801052856576 1.2526849482233702 1.2040009075248623 1.29478500493812 1.028486783383098 0.7751251791889484 1.0 10.176216122240067 -8.96916555448451 24.99023980295199 1.012567561413969 1.1223656284709385 0.22441108593457215 0.13495415118949625 248.3206007670733 201256.60149499937 0.02005922133330407 0.021148845251632367 1.073580082069843e-09 8.96916555448451 0.10979806705696937 RPTPNDDT(ph)LDEGVGLVHSNIATEHIPS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 2 RPT(0.034)PNDDT(0.966)LDEGVGLVHS(0.005)NIAT(0.068)EHIPS(0.927)PAK;RPT(0.035)PNDDT(0.965)LDEGVGLVHS(0.003)NIAT(0.123)EHIPS(0.875)PAK 89.915 2.7638000000000003e-09 7809800.0 756.8399999999999 921.44 857.5 1419.62 1118.1 904.4 688.38 1028.92 980.62 1112.56 1337.33 True False 833.6738396438396 999.0929825939609 915.695106566392 1507.3067032090562 1039.5685132355993 897.0348662528642 714.57667759599 1008.3973834278748 939.4079515979084 1042.3127717293228 1172.8468880333442 0.7108121683656105 0.8518528656961032 0.7807456505271971 1.2851692054506294 0.8863633640864844 0.7648354405041158 0.6092668061678606 0.8597860417388139 0.8009638437742957 0.888703190812141 1.0 10.195798970413065 -10.816331657151842 1.0717843116362473 0.9996337882756847 0.8414699531686115 0.04411314416170853 0.16303002974620912 0.9580094046577247 1.9601086483801589 0.11265782336951527 0.028190047375501442 1.5263999489956544e-11 10.816331657151842 -0.15816383510707321 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAK ddPTM_A549_MK2206_60min_R1 4 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.001)EHIPS(0.999)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.001)EHIPS(0.999)PAK 174.16 4.1906e-58 774617000.0 7172.8 7143.5 7123.299999999999 6133.0 10924.1 9147.4 8214.2 8941.3 12903.5 11392.1 12078.7 True False 8383.393281876824 7507.073637644531 8133.49105225935 7635.585275320836 9317.179361067761 10115.3717964473 9706.613813672991 10208.756656582837 9980.877852655332 8818.616697842936 9079.225434838925 0.9233599652353554 0.8268407576750202 0.8958353452761961 0.8409952291768709 1.0262086152543097 1.1141227706090941 1.0691015311093217 1.1244083242398255 1.0993093986141784 0.9712961486785009 1.0 13.148353508501879 -6.839656220212361 5.052861938434354 1.0606951330343393 0.8704058380364712 0.768553641166668 0.049311773703912404 0.07477461086868827 3.40041580546589 0.007356312543584807 0.014253050551762549 1.446584408137809e-07 6.839656220212361 -0.19028929499786806 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAK ddPTM_A549_PD325901_60min_R1 4 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.001)EHIPS(0.999)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.001)EHIPS(0.999)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.001)EHIPS(0.999)PAK 168.33 8.1831e-58 1213480000.0 7390.3 7498.6 7358.500000000001 8046.6 9171.599999999999 9559.1 7771.500000000001 8300.3 8943.7 9207.5 9366.2 True False 8140.557815548692 8130.533338338985 7857.892060255156 8543.62020684549 8527.418456302312 9481.253858909506 8067.248685227975 8134.744005040616 8567.827391554549 8626.136878638217 8214.21677723367 0.9910327467995329 0.9898123654191084 0.956620974751227 1.0401016236295084 1.0381292200537857 1.1542492870638044 0.9821080821225673 0.990324972623888 1.0430486099783653 1.0501472158059202 1.0 13.003907305915412 -6.270027555280002 24.410551085796286 1.0277576093229623 0.9802210620933184 0.23172895929097892 0.04473824510623866 580.0196641755864 1648617.8602748555 0.006404639709472393 0.015091087341821496 5.369977236553344e-07 6.270027555280002 -0.047536547229643955 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAKK ddPTM_A549_MK2206_60min_R1 3 RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK 31 2 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 RPTPNDDTLDEGVGLVHSNIAT(0.003)EHIPS(0.997)PAKK;RPTPNDDTLDEGVGLVHSNIAT(0.001)EHIPS(0.999)PAKK;RPTPNDDTLDEGVGLVHSNIAT(0.028)EHIPS(0.972)PAKK 131.5 3.0268e-28 72364200.0 2824.26 3666.22 3473.15 2763.4500000000003 4221.34 3626.21 3351.5699999999997 3145.88 5001.200000000001 5643.9 5340.0 True False 3300.92604147243 3852.814938308275 3965.694895365146 3440.4953740559854 3600.386477975284 4009.9331353166153 3960.506885575221 3591.8181238534444 3868.4361852753045 4368.939070141216 4013.930623497551 0.8223674874071834 0.9598608694813745 0.9879829193235097 0.8571387243006454 0.8969727720002484 0.9990040963444823 0.9866904182126149 0.8948381177360017 0.9637526275689664 1.0884440913267024 1.0 11.970799966135662 -2.0000000012248664 0.0791596757041765 1.057539506856497 0.6250936898873629 0.3709973123790413 0.05754334102537291 159.14254295202653 0.8931113300862775 0.732332099457504 7.542926625608503 0.009999999971796408 2.0000000012248664 -0.4324458169691341 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAKK ddPTM_A549_PD325901_60min_R1 1 RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK 31 2 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 RPTPNDDTLDEGVGLVHSNIAT(0.001)EHIPS(0.999)PAKK 132.6 4.351099999999999e-28 19601000.0 1014.3 1029.1 1180.2 1290.7 1183.9 1270.3 1131.1 1076.1 1044.8 1242.6 1225.3 True False 1117.2709893118056 1115.8258686267645 1260.2954691191328 1370.4236076076197 1100.7469482332754 1259.9550979666221 1174.1446294616687 1054.6363413158815 1000.8906893898705 1164.142023936558 1074.5958678166614 1.0397127169136156 1.0383679130405306 1.1728087803648188 1.2752920876124474 1.024335735135244 1.172492036961364 1.092638325370884 0.9814260159576704 0.9314112582839693 1.0833300767309242 1.0 10.069578480181683 -8.228172577631035 3.657505920656343 0.9670879473562326 1.122353711707189 0.318305222951636 0.07860651535741497 0.14814150930388795 4.238582164634158 0.011869241659350119 0.015196245335764429 5.913266092596028e-09 8.228172577631035 0.1552657643509563 RPTPQDS(ph)PIFLPVDDTSFR ddPTM_A549_MK2206_60min_R1 2 RPTPQDSPIFLPVDDTSFR 19 1 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 RPT(0.188)PQDS(0.812)PIFLPVDDTSFR;RPT(0.001)PQDS(0.999)PIFLPVDDTSFR 102.16 9.2869e-10 22140000.0 980.55 1074.01 1070.88 1041.4299999999998 1462.52 1293.39 888.81 1346.22 1665.8999999999999 1765.32 1951.81 True False 1146.0428678541598 1128.6725215323872 1222.746886701878 1296.5803967515699 1247.3852453885286 1430.255671317202 1050.2952720570092 1537.0508076258411 1288.5763098956506 1366.5329859320127 1467.1217097844108 0.7811505072899285 0.7693107627030087 0.8334324811276613 0.8837578969110195 0.8502261517020481 0.9748718608542531 0.7158883036441108 1.047664142228327 0.8783022576122899 0.9314380509936158 1.0 10.518772844029815 -2.000000001734141 0.06351066205468572 1.1606451753144431 0.21973008501714902 0.3486095498111531 0.07929053798493371 175.75240277223995 0.8076177184658931 2.2672542248288523 15.037811109783853 0.009999999960069932 2.000000001734141 -0.940915090297294 RPTPQDS(ph)PIFLPVDDTSFR ddPTM_A549_PD325901_60min_R1 2 RPTPQDSPIFLPVDDTSFR 19 1 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 RPTPQDS(1)PIFLPVDDTSFR;RPT(0.003)PQDS(0.997)PIFLPVDDTSFR 154.92 8.851399999999998e-27 32644000.0 2724.4 1990.24 2299.93 2218.3999999999996 2318.3 2625.3999999999996 3182.9 2688.4 2796.8999999999996 2744.1000000000004 3085.3 True False 3000.979082402725 2157.9645095478886 2456.017080402614 2355.4255296480533 2155.4706057008234 2604.0196128485954 3304.027001249709 2634.7777529910004 2679.3560194817464 2570.8370576889643 2705.827659328122 1.1090799046484325 0.7975247433473749 0.9076768329777742 0.8705009432244933 0.7966030646002205 0.9623745266522975 1.2210781384613847 0.9737418951675718 0.9902168049191468 0.9501111605634643 1.0 11.40185423818549 -7.516171323827581 24.989382832959397 1.012294715515281 0.888941820404446 0.26360092890538867 0.10252165931214653 315.5722967001487 1175706.9671847587 0.014452417435069234 0.021894498400495097 3.046692869696054e-08 7.516171323827581 -0.12335289511083503 RPTSNGVVS(ph)SPNSTSRPTLPVK ddPTM_A549_MK2206_60min_R1 1 RPTSNGVVSSPNSTSRPTLPVK 22 2 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 RPT(0.086)S(0.086)NGVVS(0.4)S(0.4)PNS(0.02)T(0.005)S(0.001)RPTLPVK 47.745 0.004432 4587500.0 1288.6 1758.7 1549.3 1238.6 1927.7 1810.7 1564.8 1655.3 2275.3 2418.1 2482.1 True False 1506.0841767547502 1848.2103179849425 1769.0140366495039 1542.0570556028667 1644.137883608748 2002.3070721546158 1849.1039049007202 1889.9438441436444 1759.9481829074823 1871.8495305566134 1865.7260675249577 0.807237569850057 0.9906118321200007 0.9481638636245511 0.8265184704464867 0.8812321981381945 1.0732052829228271 0.991090780734876 1.0129803496023473 0.9433047077710617 1.0032820804394822 1.0 10.865521464831252 -7.217364672356787 24.99069413680173 0.9836538845782457 0.8959214195154901 0.4746399907031439 0.057055192104952315 395.99651673381226 224533.0831841832 0.00844378995570922 0.01462505892183577 6.06227073524531e-08 7.217364672356787 -0.08773246506275556 RPTSNGVVS(ph)SPNSTSRPTLPVK ddPTM_A549_PD325901_60min_R1 1 RPTSNGVVSSPNSTSRPTLPVK 22 2 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 RPT(0.02)S(0.026)NGVVS(0.472)S(0.472)PNS(0.006)T(0.003)S(0.001)RPTLPVK 71.09100000000001 0.00014647 8533800.0 1655.1 1732.4 2158.5 1831.7 1944.2 2058.2 2144.2 1825.5 2143.9 2485.3 1824.1 True False 1823.1245335797782 1878.3954278583292 2304.988790114936 1944.8399489074739 1807.6460991258843 2041.438701594036 2225.7987043512608 1789.0889704229548 2053.7993386130793 2328.377733856048 1599.747263922609 1.1396328499474624 1.1741826163543296 1.4408455898609023 1.2157170027837345 1.129957300063451 1.276100761434273 1.3913439669798606 1.1183572622815912 1.283827380068228 1.4554659891380743 1.0 10.643628283595774 -10.80717167863902 0.7996332927004888 0.981247642059647 1.2463784700549225 0.0 0.16768568835526304 0.5573969920365833 0.5565207919285338 0.09656959347104585 0.018202351676246998 1.5589361262679802e-11 10.80717167863902 0.26513082799527554 RPTSNGVVSS(ph)PNSTSRPTLPVK ddPTM_A549_MK2206_60min_R1 2 RPTSNGVVSSPNSTSRPTLPVK 22 2 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 RPTSNGVVS(0.059)S(0.94)PNSTSRPTLPVK;RPTSNGVVS(0.062)S(0.937)PNS(0.001)TSRPTLPVK 95.366 1.8180999999999998e-07 35878000.0 2654.2 3015.2 2818.8 2574.8 3949.2000000000003 2760.5 2429.5 2453.0 4698.6 4197.8 4325.5 True False 3102.1640710402444 3168.66080103952 3218.54822597794 3205.626115587164 3368.277911473608 3052.614277728401 2870.908702042625 2800.7202619974355 3634.3746021223983 3249.514064501282 3251.358972273158 0.9541130639510391 0.9745650443587223 0.9899086054246792 0.98593423332336 1.0359600217009282 0.9388733461178521 0.8829873067000827 0.8613998902862877 1.1178017047995958 0.9994325733369926 1.0 11.666827132886015 -8.773164966990482 24.999534609336337 1.0556285776190721 0.955981762578508 0.31343539786159047 0.055167692067684695 184.57760649963706 393527.3939252255 0.011147326400826373 0.01191386230476485 1.6859125089808637e-09 8.773164966990482 -0.09964681504056416 RPTSNGVVSS(ph)PNSTSRPTLPVK ddPTM_A549_PD325901_60min_R1 2 RPTSNGVVSSPNSTSRPTLPVK 22 2 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 RPTSNGVVS(0.031)S(0.966)PNS(0.002)TS(0.001)RPTLPVK;RPT(0.002)S(0.002)NGVVS(0.067)S(0.913)PNS(0.011)T(0.003)S(0.002)RPTLPVK 102.95 1.4925999999999998e-10 46859000.0 2950.1000000000004 3210.6 3677.7 3375.3 4413.200000000001 3835.5 3632.3999999999996 3896.1 4089.6000000000004 3450.5 4315.9 True False 3249.5919802511653 3481.1685296016785 3927.290837806672 3583.7846151375206 4103.232056713485 3804.264959655973 3770.6329697255464 3818.389229068678 3917.728333967089 3232.6348411339854 3785.0716607442514 0.8585285224460464 0.9197100719929786 1.0375737079266965 0.9468208098424346 1.0840566373601164 1.0050707887807724 0.9961853586106568 1.0088023613053274 1.0350473346643994 0.8540485176701671 1.0 11.886104898907886 -5.584897052769789 3.300389328684477 1.0151661055032941 0.8655388420910741 0.3144791592933309 0.05830124940010531 0.08751729825890515 1.8307006067723481 0.004147144666432554 0.022419818973044108 2.6007759904163075e-06 5.584897052769789 -0.14962726341222 RPVHGES(ph)DTEQLQDDDIETTKVEMLR ddPTM_A549_MK2206_60min_R1 1 RPVHGESDTEQLQDDDIETTKVEMLR 26 2 J3KT10;Q9BW27-3;Q9BW27;J3KS87;F5H0W7;J3QL54 J3KT10 NUP85 Nuclear pore complex protein Nup85 1 RPVHGES(0.825)DT(0.175)EQLQDDDIETTKVEMLR 105.02 9.1922e-13 2774600.0 1183.0 1085.4 826.44 737.79 1656.9 1071.3 1060.0 768.4 1822.1 1548.2 1735.7 True False 1382.661478426875 1140.6422238817636 943.6416190851451 918.5485831206515 1413.1722048821575 1184.6642549286132 1252.5882791377583 877.3230531263072 1409.3972592957955 1198.4605447284027 1304.6777871169852 1.059772376045594 0.8742712071478587 0.7232756075125333 0.7040424786800551 1.0831580171261428 0.9080128953114377 0.9600748104293767 0.6724442324299656 1.0802646241185836 0.9185873757969802 1.0 10.349477836801524 -8.831198037614344 24.999997910557617 1.037903003214146 0.87359026129681 0.13437565146023223 0.1336604439540011 48.49681417095147 17379.45043465801 0.02227138734613443 0.023709697678191807 1.4750337667732159e-09 8.831198037614344 -0.16431274191733614 RPVHGES(ph)DTEQLQDDDIETTKVEMLR ddPTM_A549_PD325901_60min_R1 2 RPVHGESDTEQLQDDDIETTKVEMLR 26 2 J3KT10;Q9BW27-3;Q9BW27;J3KS87;F5H0W7;J3QL54 J3KT10 NUP85 Nuclear pore complex protein Nup85 1 RPVHGES(0.974)DT(0.026)EQLQDDDIETTKVEMLR;RPVHGES(0.947)DT(0.053)EQLQDDDIETTKVEMLR 124.32 2.7808e-18 10867500.0 2267.03 2504.79 2159.9 2206.3599999999997 2754.91 2015.98 2165.2 2206.9300000000003 2308.3 2544.7 2994.8 True False 2497.1772167007216 2715.8774438612704 2306.4838025338204 2342.6418461928756 2561.414625523552 1999.562527276038 2247.597870842903 2162.911049846907 2211.290178329479 2384.0272077187815 2626.4585856013523 0.9507773053763836 1.0340454095678973 0.8781725381768124 0.8919393814300353 0.9752351091944181 0.7613150796429632 0.8557522601592038 0.8235085303474101 0.8419284394782047 0.9076964779830846 1.0 11.358903120699123 -5.768898716658561 24.999348989357383 0.900337180334413 0.9924113633955992 0.25199400093517565 0.06759122717580687 207.58945254129426 695728.8997930011 0.011370570152009096 0.0363796912333941 1.7025555210515152e-06 5.768898716658561 0.0920741830611862 RPVS(ph)AIFTESIQPQKPGPGAAATVGK ddPTM_A549_MK2206_60min_R1 2 RPVSAIFTESIQPQKPGPGAAATVGK 26 2 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RPVS(1)AIFTESIQPQKPGPGAAATVGK;RPVS(1)AIFTESIQPQKPGPGAAATVGK 210.36 2.1525999999999995e-81 22879000.0 3323.8 4150.5 3654.6 4713.0 5080.0 5070.5 3632.2000000000003 4175.8 6151.5 5731.5 5828.799999999999 True False 3884.776180892007 4361.742721781151 4172.877233808346 5867.685211574606 4332.73872943531 5607.056944474506 4292.123724041663 4767.732437851163 4758.195071926946 4436.7501693003705 4381.348093303841 0.8866623007720474 0.9955252650314059 0.9524185581569957 1.3392419608344708 0.9889053864624858 1.2797560990517864 0.9796354073307842 1.0881884607931167 1.0860116499757353 1.0126449838763558 1.0 12.097159124416164 -6.063261474565094 24.999998477845445 1.072474774967412 0.9493055356603367 0.23909238068189897 0.11483429674487824 249.6427259782392 98654.68967774724 0.015082934216220163 0.03990575515356022 8.644473064963787e-07 6.063261474565094 -0.12316923930707524 RPVS(ph)AIFTESIQPQKPGPGAAATVGK ddPTM_A549_PD325901_60min_R1 2 RPVSAIFTESIQPQKPGPGAAATVGK 26 2 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RPVS(1)AIFTESIQPQKPGPGAAATVGK;RPVS(1)AIFTESIQPQKPGPGAAATVGK 215.15 1.2034999999999999e-81 40551000.0 7407.7 7769.799999999999 8501.3 8509.5 10241.400000000001 9596.3 9111.1 9312.2 9370.3 9605.1 9930.2 True False 8159.724250739488 8424.588314115468 9078.24934046982 9035.112488523308 9522.079394911963 9518.150914443127 9457.827896285227 9126.460865720424 8976.498877096006 8998.632346783377 8708.848352724237 0.9369464159043513 0.9673596292993379 1.0424167436134113 1.0374635224526572 1.0933798602582554 1.0929287695617906 1.0860021340625021 1.0479526679168265 1.0307331708546796 1.033274663000475 1.0 13.088266235901324 -5.649075197392502 3.725014725534238 1.0352336141004344 0.942746121134107 0.5644102534974833 0.03146707086950088 0.1682925057359352 4.270318387552836 0.005594120567383963 0.025641038162900885 2.243493432863337e-06 5.649075197392502 -0.0924874929663273 RPVS(ph)DLLSGK ddPTM_A549_PD325901_60min_R1 1 RPVSDLLSGK 10 1 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RPVS(1)DLLSGK 55.261 0.0073357 2109900.0 769.79 703.39 670.47 727.2 864.05 760.51 839.51 934.92 897.19 752.05 729.02 True False 847.9385141105533 762.6671438474198 715.9721260636371 772.117492408972 803.3621088106777 754.3166587062866 871.4580124474993 916.2722871694483 859.4842243622687 704.5654346543444 639.3551616385394 1.3262401947885376 1.1928692995812475 1.1198347476052963 1.2076503620150487 1.2565193135405701 1.1798085070168574 1.3630264753226153 1.433119402401047 1.3442985619441667 1.1019938164707768 1.0 9.320473760371145 -10.829382291254374 1.1164051301193112 1.0024148006028268 1.2697297122455253 0.4454114382998212 0.09197838560121131 0.32307695339049103 0.724969996429859 0.06549167643171301 0.016759138887243175 1.481213660727948e-11 10.829382291254374 0.2673149116426985 RPVS(ph)FPETPYTVSPAGADR ddPTM_A549_MK2206_60min_R1 1 RPVSFPETPYTVSPAGADR 19 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RPVS(0.998)FPET(0.002)PYTVSPAGADR 140.4 1.1134e-18 25852000.0 1471.3 1920.7 1115.4 1287.8 1994.1 1877.3 1736.7 1657.7 2418.5 2614.4 2813.7 True False 1719.6194701686059 2018.4554260269972 1273.5804921441018 1603.3110578115384 1700.7705315682958 2075.9546399491132 2052.235909791078 1892.6840514933347 1870.7136115508918 2023.8052242203432 2114.9806358305345 0.813066295282333 0.9543611850774072 0.6021712305862214 0.7580736346467456 0.8041541859793048 0.9815478235496486 0.9703331912470124 0.8948942696820928 0.8845062597068548 0.956890663646957 1.0 11.046428739156651 -7.186537890654619 5.476745364264336 0.9442313422612449 0.7820429126108698 0.48692883156842925 0.08266760215678721 0.16325430255185874 8.852289969224122 0.012851536798233249 0.022419676010885646 6.508218264651627e-08 7.186537890654619 -0.16218842965037517 RPVS(ph)FPETPYTVSPAGADR ddPTM_A549_PD325901_60min_R1 1 RPVSFPETPYTVSPAGADR 19 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RPVS(0.988)FPET(0.012)PYTVSPAGADR 162.71 3.3451e-27 55369000.0 2975.1 3662.0 3277.7 3467.1 3508.7 2657.3 3531.9 3864.4 3834.2 3123.7 4138.0 True False 3277.129961847136 3970.609591790117 3500.14443241127 3681.2548926445934 3262.2610163578825 2635.659829825007 3666.308387229839 3787.321510436848 3673.061907789663 2926.4690489060235 3629.052232943232 0.9030263968367631 1.0941175097305986 0.964478934923619 1.0143846537196364 0.8989291988536977 0.7262667111537923 1.0102660837858461 1.0436117386398862 1.0121270436525898 0.8064003660075734 1.0 11.825377106336283 RPVS(ph)PGKDITAR ddPTM_A549_MK2206_60min_R1 1 RPVSPGKDITAR 12 2 P31629 P31629 HIVEP2 Transcription factor HIVEP2 1 RPVS(0.881)PGKDIT(0.119)AR 44.567 0.012124 4783900.0 1208.4 1101.4 1154.6 1133.9 1828.0 1176.7 928.09 1484.4 2060.5 1714.4 1869.1 True False 1412.348377456496 1157.4565555402378 1318.3396415900836 1411.7055509027055 1559.103621536958 1301.2176129697564 1096.711939608454 1694.8182457843432 1593.8000399423672 1327.1158492974885 1404.9508854642825 1.0052653029146774 0.8238412940376508 0.938352831568502 1.0048077591240427 1.1097210853899238 0.9261659083119861 0.7806051805476693 1.206318500752623 1.134416908400095 0.9445994611113594 1.0 10.45630398198685 -8.270670993567476 24.996890633286643 1.0759614917732765 0.9449679579973347 0.2635015659848293 0.10439452008948896 695.1163788406761 1882197.038418372 0.01723903399250016 0.02098142543190567 5.362027122597701e-09 8.270670993567476 -0.1309935337759418 RPVS(ph)PGKDITAR ddPTM_A549_PD325901_60min_R1 1 RPVSPGKDITAR 12 2 P31629 P31629 HIVEP2 Transcription factor HIVEP2 1 RPVS(0.997)PGKDIT(0.003)AR 81.346 0.00015241 12908000.0 2107.5 2089.3 2461.7 2321.4 2712.4 2334.4 2992.0 2542.4 2683.0 2449.3 2874.7 True False 2321.4518485404997 2265.372643398988 2628.7657654046498 2464.7876057180815 2521.8903812720123 2315.3894203678547 3105.862197285224 2491.689837525783 2570.2428403838285 2294.650779999848 2521.1301242247273 0.9207981080525819 0.8985544306625637 1.042693409652158 0.977651880017906 1.000301554068939 0.9183934609800675 1.231932524006593 0.988322583425559 1.0194804368434587 0.910167530803463 1.0 11.299854867249236 -5.756218759654075 24.998628226933576 1.015752269518095 0.9096762270015464 0.18496051775187694 0.08036212697029682 127.33784617310808 609728.5445859497 0.00933403264438386 0.03410237425854422 1.7529972723920192e-06 5.756218759654075 -0.10607604251654856 RPVSFPETPYT(ph)VSPAGADR ddPTM_A549_PD325901_60min_R1 1 RPVSFPETPYTVSPAGADR 19 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RPVSFPETPY(0.002)T(0.635)VS(0.363)PAGADR 60.352 0.0018036999999999999 8245000.0 2289.3 2356.0 2271.0 2181.9 2100.0 2428.1 2548.7 2578.8 3264.9 2986.8 3385.8 True False 2521.708050706415 2554.5483883827183 2425.1237166323936 2316.6710075455676 1952.503244606706 2408.3263586339895 2645.692173202153 2527.363810970535 3127.687606995589 2798.2129382695234 2969.36806435457 0.8492406451655364 0.8603003511247037 0.8167137465188322 0.7801899115693243 0.6575484083786385 0.8110568667941372 0.8909950251577275 0.8511453468197414 1.0533175878536405 0.9423597471328469 1.0 11.53594021655442 -8.515794114916481 1.8129372462279876 1.0257436779662812 0.8000006620459141 0.601786386996706 0.06488081318723697 0.13308148426413005 0.8562839711502448 0.011651176320875652 0.013715403843487696 3.049340241425527e-09 8.515794114916481 -0.22574301592036705 RPVT(ph)PK ddPTM_A549_PD325901_60min_R1 2 RPVTPK 6 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 RPVT(1)PK;RPVT(1)PK 65.24600000000001 0.035548 94938000.0 10984.2 9899.3 9768.400000000001 9228.3 11437.5 9131.0 7808.7 8365.6 8830.7 10844.3 11070.3 True False 12099.307897859348 10733.548752596367 10431.342366161101 9798.31113201006 10634.169457232954 9056.640163373404 8105.8643515846015 8198.741545313753 8459.576388586464 10159.589047300185 9708.7232804136 1.2462305854641587 1.105557182194105 1.0744298776344068 1.0092275625753175 1.0953210993958753 0.9328353380556524 0.8349052823389652 0.8444716476628716 0.8713376768758907 1.0464392437465144 1.0 13.245065875042005 -5.842084029639662 0.6678917475158519 0.924451305627056 1.2848079063892826 0.630829187140158 0.0734648720105106 0.8681232874538436 0.4067729985833638 0.01332714800695017 0.20344338082834604 1.4385202186737882e-06 5.842084029639662 0.36035660076222653 RPVVGAVS(ph)VPELTNAQLQAQDYPSPNIMR ddPTM_A549_MK2206_60min_R1 1 RPVVGAVSVPELTNAQLQAQDYPSPNIMR 29 1 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RPVVGAVS(0.988)VPELT(0.012)NAQLQAQDYPSPNIMR 65.736 0.00016035 3876300.0 396.99 494.79 489.1 300.24 499.2 516.58 667.18 621.5 557.34 388.8 729.69 True False 463.99220652636075 519.972697581037 558.4617345415817 373.7988134782858 425.7683412862411 571.2441527219486 788.3979698821973 709.5995282639243 431.10337988909424 300.96980996667276 548.4878345805107 0.8459480361697117 0.9480113592286283 1.0181843594921283 0.6815079385747381 0.7762584955268392 1.0414891939378057 1.4374028377223216 1.293737952832871 0.7859853085325159 0.5487265003732629 1.0 9.099315811889053 -7.26840645758903 24.60771365069773 0.9832659640970781 0.8587463454048577 0.09819278290821243 0.23467919337524148 1079.5400976363903 3812932.4219098534 0.034743140987144906 0.056279486714465476 5.3900592901390615e-08 7.26840645758903 -0.12451961869222039 RPVVGAVS(ph)VPELTNAQLQAQDYPSPNIMR ddPTM_A549_PD325901_60min_R1 1 RPVVGAVSVPELTNAQLQAQDYPSPNIMR 29 1 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RPVVGAVS(0.979)VPELT(0.021)NAQLQAQDYPSPNIMR 71.036 5.094e-05 5028800.0 754.56 780.39 1069.8 984.28 1180.8 1034.1 1121.6 996.95 1149.9 1032.0 828.51 True False 831.1623757222865 846.156204078943 1142.4030612300012 1045.0767401379305 1097.8646815388568 1025.6786324547625 1164.2831017630692 977.0650501578544 1101.573701884966 966.8393438777781 726.6085223576122 1.1438929631948584 1.1645283230830226 1.5722401074009822 1.4382940854409343 1.5109438545761027 1.4115973056946312 1.6023526643829378 1.3446925271225707 1.5160484194579935 1.3306193281916014 1.0 9.505034476930488 -10.812277483201042 0.9739417024413718 0.991067206082696 1.4220610974929864 0.14471502461770314 0.17071060687750814 0.364036403392145 0.5919208007329356 0.11238801390703562 0.025678839275974863 1.5407157309277647e-11 10.812277483201042 0.4309938914102903 RPWRPEEAVEDPDEEDEDNT(ph)SEAENGFSLEEVLR ddPTM_A549_PD325901_60min_R1 2 RPWRPEEAVEDPDEEDEDNTSEAENGFSLEEVLR 34 2 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 RPWRPEEAVEDPDEEDEDNT(0.5)S(0.5)EAENGFSLEEVLR;RPWRPEEAVEDPDEEDEDNT(0.5)S(0.5)EAENGFSLEEVLR 150.23 1.7304999999999998e-40 91099000.0 568.96 859.4100000000001 1121.47 781.49 990.28 1118.6799999999998 1066.23 1184.75 886.22 866.62 1106.1 True False 626.7204003537857 931.8354967996572 1197.5796981469523 829.7608624074361 920.726149080538 1109.569840977172 1106.8059661134434 1161.1192318316043 848.9752553130654 811.9014653017055 970.0567121456048 0.6460657325565884 0.9605989888349841 1.2345460663821441 0.8553735591109333 0.9491467226117576 1.143819559294618 1.1409703703460512 1.1969601542814965 0.8751810535234303 0.8369628859181995 1.0 9.921925283403887 -5.2733941119541505 5.059183064432747 0.9962701433045431 0.6321051194520086 0.3768826358569003 0.13558204170278035 0.13055147848999651 10.399284812111565 0.018705974819969093 0.16173138969309683 5.32851126242115e-06 5.2733941119541505 -0.36416502385253446 RQAAAHTDHLR ddPTM_A549_MK2206_60min_R1 1 RQAAAHTDHLR 11 1 B9A067;Q16891-3;Q16891-2;Q16891-4;Q16891;H7C463;C9J406 B9A067 IMMT MICOS complex subunit MIC60 0 39.785 0.033697000000000005 2641000.0 204.44 138.25 78.921 119.83 0.0 200.59 115.9 0.0 227.1 232.58 288.14 False True 238.94447392188525 145.28633448650618 90.1131845261831 149.1883553793731 0.0 221.81630065913433 136.9575297661001 0.0 175.66221260417922 180.04001646617482 216.58688574055884 1.1032268786952675 0.6707993145094626 0.41606020705300806 0.6888152755383358 0.0 1.0241446516980701 0.6323445175261271 0.0 0.8110473171242615 0.831260008428386 1.0 7.758802080690286 -8.981998195382047 21.08958466382764 0.91664125014197 0.5577934400094041 0.15506748237127743 0.33126067645853763 23.830263577006995 27919.665316407147 0.05652598733665282 0.057497457858961806 1.0423217605297376e-09 8.981998195382047 -0.35884781013256584 RQAAAHTDHLR ddPTM_A549_PD325901_60min_R1 1 RQAAAHTDHLR 11 1 B9A067;Q16891-3;Q16891-2;Q16891-4;Q16891;H7C463;C9J406 B9A067 IMMT MICOS complex subunit MIC60 0 41.70399999999999 0.027081 5264600.0 218.02 188.45 178.34 0.0 394.44 247.43 458.73 250.28 163.45 229.57 383.58 False True 240.15322990215887 204.33134286533246 190.4432248455398 0.0 366.7358951441281 245.41501211515504 476.18722117668796 245.28796905913836 156.580764912686 215.07491102133864 336.40209171395963 0.7138874454632093 0.6074021175797979 0.5661178379576556 0.0 1.0901712687802223 0.7295287935481379 1.4155299057462063 0.7291511411519552 0.46545716798284814 0.6393388041243672 1.0 8.394042865926565 -6.7882165994184085 24.996318229699988 0.8104919074227608 0.488266442154262 0.28223238407053064 0.2940752282088555 283.1843741806057 264349.6348939728 0.046691761365641835 0.08825610732888019 1.628483642432501e-07 6.7882165994184085 -0.32222546526849877 RQAEMGT(ph)QEK ddPTM_A549_PD325901_60min_R1 1 RQAEMGTQEK 10 1 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 RQAEMGT(1)QEK 41.18899999999999 0.033235 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RQAPGVGAVGGGS(ph)PEREEVGAGYNS(ph)EDEYEAAAAR ddPTM_A549_MK2206_60min_R1 1 RQAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 35 2 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3 A0A087WXV6 OTUD5 OTU domain-containing protein 5 2 RQAPGVGAVGGGS(0.936)PEREEVGAGY(0.073)NS(0.978)EDEY(0.013)EAAAAR 53.86600000000001 0.001379 10578000.0 1556.9 1687.8 1187.5 1158.7 1877.9 1554.6 1492.3 1552.9 1659.5 1939.7 2328.2 True False 1819.6666574495357 1773.701810823329 1355.9053563036757 1442.5815520160206 1601.6633976390876 1719.1067401400378 1763.4315933559203 1773.0283305567968 1283.6258996769513 1501.520422819843 1750.0436849488763 1.039783562604435 1.0135185916088396 0.774783719952274 0.8243117382856432 0.9152133809081896 0.9823221871117221 1.0076500424087615 1.0131337553488513 0.7334822043110596 0.8579902523197337 1.0 10.773175220018256 RQAS(ph)ESSSRPH ddPTM_A549_MK2206_60min_R1 2 RQASESSSRPH 11 2 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 RQAS(0.994)ES(0.003)S(0.003)S(0.001)RPH;RQAS(0.997)ES(0.002)S(0.001)SRPH 71.279 0.00085205 24596000.0 648.25 735.46 853.8399999999999 698.0 846.48 530.86 593.58 1089.47 1178.0900000000001 1958.2399999999998 2210.4 True False 757.658751809147 772.8917725963533 974.9273510958577 869.0100313344111 721.9639133252754 587.0352528436513 701.4258025760284 1243.905708861944 911.2544960231506 1515.8722239432536 1661.4966760634802 0.4560097908857926 0.46517804322518175 0.5867765883262044 0.5230284501039888 0.4345262459602366 0.3533171394808271 0.422165035104307 0.7486657823529818 0.5484539988260168 0.9123534496227528 1.0 10.698267691485874 -10.67935657067641 0.4173480387232553 1.1393994455919856 0.4684006241208245 0.7824900316505358 0.09382122129472131 0.682388802272327 0.15522758321708327 0.19765781659247664 0.028441581277396724 2.092393823270828e-11 10.67935657067641 -0.6709988214711611 RQAS(ph)ESSSRPH ddPTM_A549_PD325901_60min_R1 1 RQASESSSRPH 11 2 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 RQAS(1)ESSSRPH 106.58 5.0715e-05 25478000.0 667.05 725.14 637.67 883.83 821.62 931.29 1009.9 1060.3 1020.6 1144.7 1268.7 True False 734.7684249437436 786.2500926790512 680.9461208212145 938.4221717764325 763.9122456351241 923.705883008215 1048.3322971384841 1039.1514847107417 977.7077312321036 1072.4234466442763 1112.657942951929 0.6603722461139958 0.7066413336277421 0.6119995144371463 0.8434058083356314 0.6865652202225172 0.8301795613462155 0.9421874024978546 0.9339361582714526 0.8787136580701551 0.963839294400839 1.0 10.11979442733887 -6.742584230190451 0.3106230278791097 0.9821503288395405 0.5479920617820835 0.7792994190107096 0.06082053884711088 1.0812757805828423 0.1468882463208013 0.029362980624685505 0.16268636214407328 1.8089050441963206e-07 6.742584230190451 -0.43415826705745697 RQATVSWDSGGSDEAPPKPSRPGYPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RQATVSWDSGGSDEAPPKPSRPGYPSPR 28 3 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-6;B4DWJ1;E5RG80;E5RHK7;E5RJQ2;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 RQATVSWDSGGSDEAPPKPS(0.074)RPGYPS(0.926)PR;RQATVSWDSGGSDEAPPKPS(0.018)RPGYPS(0.982)PR 95.323 1.6062e-10 31481000.0 3280.2000000000003 3674.5 3200.8 2934.14 4960.2 3124.58 3123.5 3358.7000000000003 5306.3 5246.6 5439.1 True False 3833.817566809666 3861.5163549415333 3654.7215700688907 3653.004431718549 4230.561150737208 3455.220981671657 3690.9995187611203 3834.8060105873606 4104.431522419886 4061.389416078049 4088.421358476693 0.9377256477884437 0.9445005825867953 0.8939199875989801 0.8934999872614949 1.0347664244454184 0.8451235033560824 0.9027933265998668 0.9379674143998145 1.0039159769846127 0.9933881711231654 1.0 11.99732817478757 -8.697054635471636 4.237676151592841 1.0020092620170429 0.9218552848985041 0.36846368848278266 0.044189027584514685 0.15099108321795587 5.384523233757288 0.007247414514887208 0.008121848404025203 2.008840078959799e-09 8.697054635471636 -0.08015397711853878 RQATVSWDSGGSDEAPPKPSRPGYPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RQATVSWDSGGSDEAPPKPSRPGYPSPR 28 3 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-6;B4DWJ1;E5RG80;E5RHK7;E5RJQ2;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 RQATVSWDSGGSDEAPPKPS(0.02)RPGYPS(0.98)PR 85.20299999999999 1.9159000000000004e-07 29255000.0 1727.8 2092.1 1672.8 2148.3 2242.4 1852.3 1589.8 2063.2 2276.6 2291.7 2208.9 True False 1903.2049840608663 2268.4086092255875 1786.3262673635695 2280.995611856705 2084.9015598600363 1837.215482928108 1650.3007089719404 2022.047857450912 2180.922419089757 2147.00167089603 1937.2193033707865 0.9824416785178969 1.170961184042781 0.9221084387582442 1.1774586428535703 1.0762341445969905 0.9483776461092089 0.851891526220287 1.0437888234607835 1.125800478704153 1.1082904589894493 1.0 10.919771568482668 -4.046948635686412 13.5666984918509 1.0437469983422376 1.0392005289119162 0.0 0.1010797246565979 0.0 0.0 0.013041415820841423 0.0 8.975349403118141e-05 4.046948635686412 -0.004546469430321443 RQAVDVS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 RQAVDVSPLR 10 1 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 RQAVDVS(1)PLR 49.928999999999995 0.01179 3188500.0 305.85 511.92 260.79 311.46 464.92 435.99 387.6 399.43 801.51 384.67 651.04 True False 357.47000268542655 537.9745414128915 297.7739434698405 387.7677139819707 396.5308838757999 482.1261724132606 458.02190282433475 456.05042570307245 619.969264748462 297.7727798350823 489.36880021008335 0.7304715840731297 1.0993233348385554 0.6084857541837726 0.792383400444622 0.8102904878806564 0.9852000622154221 0.9359442257612427 0.9319156135562637 1.2668753391763279 0.6084833763559305 1.0 8.93477831485973 -8.022605632845456 1.2176242249224385 1.1203195439279217 0.8208605812688247 0.0 0.20563688359536708 0.3078160003788912 0.9090739239068267 0.02719346497425595 0.039454695461273795 9.492800790410044e-09 8.022605632845456 -0.299458962659097 RQAVDVS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 RQAVDVSPLR 10 1 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 RQAVDVS(1)PLR 49.928999999999995 0.01179 3492100.0 479.26 475.55 497.52 588.14 441.31 502.89 474.94 402.49 564.0 469.95 408.22 True False 527.9141223874353 515.6262674428699 531.2846990308002 624.4680720371463 410.3139080368501 498.7946305726482 493.01410159714004 394.46202120270345 540.2970413628323 440.27727679783135 358.0115279197892 1.4745729710293352 1.4402504590812883 1.4839876864239747 1.7442680565779305 1.146091329575228 1.3932362275339938 1.3770900184744819 1.1018137418499014 1.5091610164125309 1.2297851953428534 1.0 8.483862232585336 -13.103958149228117 0.31107637733889404 5.0170212517831335e-14 1.4477574301263918 0.2688072771454254 0.1757913826997445 9.901334851397596 0.3698620648583799 6.377303430685082 0.06012494909690362 7.871216369883233e-14 13.103958149228117 1.4477574301263416 RQAVDVS(ph)PLRR ddPTM_A549_PD325901_60min_R1 1 RQAVDVSPLRR 11 2 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 RQAVDVS(1)PLRR 59.248000000000005 0.0032290999999999995 11974000.0 3417.0 3201.1 3223.7 3462.8 4207.5 3757.3 3081.6 3550.2 3730.3 3890.4 3537.4 True False 3763.891324537549 3470.867931261429 3442.4796676828914 3676.689291410602 3911.9797150870068 3726.701794528845 3198.8719743162237 3479.3884759219786 3573.528463467681 3644.7594800601814 3102.3222254261477 1.2132496404433055 1.118796720345404 1.1096460707623685 1.1851410086537857 1.260984330713629 1.2012619978625625 1.0311217668167314 1.1215432257182878 1.1518882320410178 1.1748487794685873 1.0 11.599132825607752 -11.982795640559742 0.2853463889462741 0.8267852412559917 1.1721914330207204 0.0 0.0775542728170972 5.510088679598077 0.31412817667268594 0.6738183749572809 0.0283148986308863 1.0404096206121392e-12 11.982795640559742 0.34540619176472864 RQDNQNDDS(ph)EEHDDGGYR ddPTM_A549_MK2206_60min_R1 4 RQDNQNDDSEEHDDGGYR 18 1 Q9NUP7 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 RQDNQNDDS(0.999)EEHDDGGY(0.001)R;RQDNQNDDS(1)EEHDDGGYR;RQDNQNDDS(1)EEHDDGGYR;RQDNQNDDS(1)EEHDDGGYR 93.006 9.4726e-07 53634000.0 538.13 448.08 275.44 818.4099999999999 717.037 541.816 657.64 653.7 925.01 1024.74 826.39 True False 628.9531879846606 470.8853580955781 314.5015337602396 1018.920486739821 611.5618071531702 599.150609491647 777.1246753699579 746.3639768722885 715.4967119374369 793.250522287161 621.1745557962807 1.0125224578434455 0.758056416995304 0.5063013782930654 1.6403126580638376 0.9845248834592267 0.9645446741191751 1.2510568375965843 1.2015366210799283 1.151844848217012 1.2770170878462606 1.0 9.278854925845197 -6.224956315190589 24.999962872945492 1.1118001208663209 0.7588698042290424 0.406626501103996 0.2162037754785078 476.3719991633931 326432.6541035699 0.027868280146123 0.07373034470431326 5.957220630008464e-07 6.224956315190589 -0.3529303166372785 RQDNQNDDS(ph)EEHDDGGYR ddPTM_A549_PD325901_60min_R1 4 RQDNQNDDSEEHDDGGYR 18 1 Q9NUP7 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 RQDNQNDDS(1)EEHDDGGYR;RQDNQNDDS(1)EEHDDGGYR;RQDNQNDDS(0.999)EEHDDGGY(0.001)R;RQDNQNDDS(1)EEHDDGGYR 130.09 7.0985e-13 60845000.0 898.6 771.2700000000001 909.24 1248.2 1185.5500000000002 1236.89 1014.47 1257.9 1044.2900000000002 1503.21 1719.19 True False 989.8252104856438 836.2676296723006 970.9464941042872 1325.2984791321214 1102.2810579254674 1226.8171779295722 1053.076210989285 1232.8101976965402 1000.4021229162987 1408.2970640605765 1507.7405288433258 0.6564957242643039 0.5546495658068231 0.6439745271350873 0.8789963881576055 0.7310814008369798 0.8136792468334946 0.6984465767443157 0.8176540817950284 0.6635107989593969 0.934044709364523 1.0 10.558172457327325 -10.890208293174917 0.7697598624863092 1.032434405762722 0.7153189671387108 0.5316436131920682 0.08957328403150312 0.5181944036124015 0.4488050706851084 0.1078113636626789 0.01733052745041655 1.2876318389139822e-11 10.890208293174917 -0.31711543862401115 RQDPQVVS(ph)PFSR ddPTM_A549_MK2206_60min_R1 2 RQDPQVVSPFSR 12 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 RQDPQVVS(0.971)PFS(0.029)R;RQDPQVVS(0.889)PFS(0.111)R 53.981 0.0090194 17574200.0 2187.47 2797.62 2003.35 1876.02 3062.58 1965.16 1754.72 1546.54 3335.17 3052.63 2787.2799999999997 True False 2556.6614574931814 2940.0069083988383 2287.455154148184 2335.644984217737 2612.078538975194 2173.1119268323655 2073.529910536421 1765.7667810801117 2579.7593201720847 2363.038762856389 2095.1214509854394 1.2202927215940904 1.4032632366090316 1.0918007417051077 1.1148017138191046 1.2467432557413816 1.0372247994550594 0.9896943728780674 0.8427992469121941 1.2313173152605048 1.127876745161926 1.0 11.032818161835298 -5.777539728109144 24.294964058067258 1.0894027601079945 1.3117779230833329 0.38115515554636736 0.11490567374846135 131.6942645168424 198724.18038391572 0.017624593769037203 0.055064951671849674 1.6690151231438725e-06 5.777539728109144 0.22237516297533833 RQDPQVVS(ph)PFSR ddPTM_A549_PD325901_60min_R1 2 RQDPQVVSPFSR 12 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 RQDPQVVS(0.748)PFS(0.252)R;RQDPQVVS(0.908)PFS(0.092)R 76.34100000000001 0.00048725 38838000.0 2642.6 2820.8 2788.9 2881.0 3518.8999999999996 3365.2 2941.8 3105.1000000000004 3376.5 3634.3999999999996 3112.5 True False 2910.874806620699 3058.518715598462 2978.1715250180882 3058.952826774269 3271.74460354597 3337.794926928506 3053.751808814728 3043.166344596173 3234.597447095041 3404.923363749417 2729.682231763125 1.0663786329226095 1.120466946668345 1.0910323151770167 1.1206259802623493 1.1985807598684197 1.2227778340237778 1.118720623697757 1.1148427128935685 1.1849721588310251 1.2473698674992466 1.0 11.41451729831908 -10.882093423612087 1.0634936863564954 0.9978068123847805 1.1417193773243204 0.0 0.08538933060811853 0.33084526791872515 0.6475143721681111 0.03637360855167114 0.008218797600649143 1.311917654425208e-11 10.882093423612087 0.14391256493953986 RQDPQVVSPFS(ph)R ddPTM_A549_MK2206_60min_R1 1 RQDPQVVSPFSR 12 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 RQDPQVVS(0.319)PFS(0.681)R 78.615 0.00040688 10821000.0 407.91 459.55 214.07 369.11 472.01 331.02 485.15 339.04 557.48 553.76 759.15 True False 476.75523555799373 482.93913210324706 244.4283449464656 459.54196656997783 402.5779542678661 366.0483166867072 573.2954751166823 387.09995826645365 431.2116701126283 428.66523139697694 570.6321035258735 0.8354861785941855 0.8463231022566359 0.4283466412705656 0.8053209129498992 0.7054947518381474 0.6414786592358449 1.0046674058020082 0.6783704524764822 0.7556736949222073 0.751211207270501 1.0 9.15641710440326 -11.147978240304873 0.36896281409893256 1.1360820936867941 0.7220499680649316 0.0 0.15607251975247094 3.055722660001846 0.41547204142048655 0.5186779892754642 0.04375893941704503 7.11249148867624e-12 11.147978240304873 -0.41403212562186253 RQDS(ph)AGPVLDGAR ddPTM_A549_PD325901_60min_R1 2 RQDSAGPVLDGAR 13 1 Q0VF96 Q0VF96 CGNL1 Cingulin-like protein 1 1 RQDS(1)AGPVLDGAR;RQDS(1)AGPVLDGAR 88.565 7.9722e-05 23180900.0 4839.0 4847.4 4839.9 4994.3 5683.6 5910.8 5139.299999999999 4977.8 4747.5 5984.9 5726.7 True False 5330.251717716479 5255.9074099517775 5168.364718683007 5302.786568121743 5284.403543355559 5862.664404519497 5334.878873832866 4878.513873991442 4547.979084875967 5607.012392610574 5022.352204542298 1.0613058385064496 1.0465031514910978 1.029072535774901 1.0558372555643978 1.0521770135069894 1.1673144705417529 1.062227151056414 0.9713603656826842 0.9055476198508539 1.1164116263171469 1.0 12.294147489282937 -8.285357148521127 4.72434805884283 0.9548471411210785 1.0685753322149691 0.1031150338047826 0.06247809278972 0.11196529595336496 6.655613953265114 0.007850286134276123 0.00972730224967096 5.18373571387194e-09 8.285357148521127 0.11372819109389065 RQDS(ph)MEALQMDR ddPTM_A549_PD325901_60min_R1 2 RQDSMEALQMDR 12 1 Q8TDR0-2;Q8TDR0 Q8TDR0-2 TRAF3IP1 TRAF3-interacting protein 1 1 RQDS(1)MEALQMDR;RQDS(1)MEALQMDR 55.782 0.0046984999999999996 22166000.0 1653.45 1723.9 1497.04 1930.88 2188.51 2459.0 1668.7 2047.5700000000002 2226.1000000000004 1754.7 2265.5 True False 1821.3070267944443 1869.1791030275767 1598.6381368328302 2050.14607225335 2034.796607549629 2438.9747192788504 1732.2032916476765 2006.7296100624096 2132.5447584712783 1643.9079425410239 1986.8578621877475 0.9166770615332223 0.940771425374841 0.8046061911406964 1.031853416024393 1.0241279188985848 1.2275536995853709 0.8718305041410116 1.0100015951079566 1.0733252735669343 0.8273908133171145 1.0 10.956272951989664 -6.2922876752940144 21.377697069210058 1.0348120279731376 0.892693635399576 0.17804668700248238 0.1048009275635436 85.87907276358072 59513.67546835059 0.011333596780216762 0.0263441054144555 5.101669550470772e-07 6.2922876752940144 -0.14211839257356162 RQDSDLVQCGVT(ph)SPSSAEATGK ddPTM_A549_PD325901_60min_R1 1 RQDSDLVQCGVTSPSSAEATGK 22 1 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 RQDSDLVQCGVT(0.601)S(0.398)PS(0.001)SAEATGK 123.71 1.182e-15 31354000.0 8918.8 9661.2 8380.5 9543.5 9893.9 8688.0 9039.1 9307.6 7253.6 8460.7 10326.0 True False 9824.230010326452 10475.383229984353 8949.251126040412 10132.98032013893 9198.98659610204 8617.24780849722 9383.087896885314 9121.952616329057 6948.756417073479 7926.489958087901 9055.967461907167 1.0848349501752175 1.1567381700572343 0.9882159099714476 1.1189285256116575 1.0157928056606285 0.9515546345263091 1.0361220859454432 1.0072863727370323 0.7673124319740087 0.875278096065354 1.0 13.144653059237635 -7.633075479834339 0.8943955731994441 0.896861642247309 1.0862150873461591 0.4671042992361588 0.07615021633178881 0.4289714660683588 0.6902685223221594 0.018614392271410186 0.03542670305091986 2.327686673493757e-08 7.633075479834339 0.1893534450988501 RQDSDLVQCGVTS(ph)PSSAEATGK ddPTM_A549_MK2206_60min_R1 1 RQDSDLVQCGVTSPSSAEATGK 22 1 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 RQDSDLVQCGVT(0.129)S(0.853)PS(0.014)S(0.005)AEATGK 111.43 6.3637e-11 15155000.0 2282.1 2508.8 2322.3 2052.5 3668.4 2670.9 1960.2 1792.9 3317.0 3306.4 3481.1 True False 2667.262688011809 2636.487204048801 2651.637060163392 2555.362592140226 3128.7832195000965 2953.53286520007 2316.34296676022 2047.04906552597 2565.7047961605567 2559.4819436054718 2616.6467965275874 1.0193437996872148 1.007582378923874 1.0133721768189112 0.9765791070966519 1.1957224122308514 1.1287472459483434 0.8852333336826794 0.7823176854600704 0.9805315717678699 0.9781533934966018 1.0 11.353503482533748 -7.7592303636326525 24.999996744494567 0.9644213438877643 1.055331694232663 0.3372219345581159 0.08409062032706623 78.57497761188796 889247.1151847736 0.01432864768203636 0.02068221233821438 1.7408832085129544e-08 7.7592303636326525 0.09091035034489858 RQDSDLVQCGVTS(ph)PSSAEATGK ddPTM_A549_PD325901_60min_R1 1 RQDSDLVQCGVTSPSSAEATGK 22 1 Q9HC52 Q9HC52 CBX8 Chromobox protein homolog 8 1 RQDSDLVQCGVT(0.127)S(0.872)PS(0.001)SAEATGK 114.2 3.0326e-15 23878000.0 6779.3 7525.8 7556.5 6888.5 8854.1 8098.3 7980.1 7629.7 6984.6 7135.9 8234.6 True False 7467.529545343115 8160.025577797397 8069.329530925884 7313.987000081413 8232.218560986783 8032.350129782812 8283.787072378273 7477.519648116137 6691.0615516007765 6685.338056179687 7221.796403430249 1.0340265950721275 1.1299163147165854 1.1173576600820634 1.0127656044979854 1.1399128556264198 1.1122371334045864 1.147053532060748 1.0354099216317458 0.92650930292394 0.9257167722153241 1.0 12.818142033126172 -8.532279860533812 5.177341693930307 0.9656223441158753 1.0994586252558083 0.6807059111546225 0.04418681605111155 0.08072817460036785 6.470171185755797 0.007625174696580863 0.00884507693227676 2.935757232419525e-09 8.532279860533812 0.13383628113993296 RQDTRS(ph)PTSAPTQR ddPTM_A549_PD325901_60min_R1 2 RQDTRSPTSAPTQR 14 2 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;H0YID7 F8VV64 TNS2 Tensin-2 1 RQDT(0.158)RS(0.824)PT(0.008)S(0.008)APT(0.002)QR;RQDT(0.218)RS(0.779)PT(0.002)SAPTQR 64.507 0.0016792000000000003 12235900.0 841.75 596.55 790.01 726.5 571.13 792.86 328.06 647.5 689.75 710.71 892.9200000000001 True False 927.2038403364011 646.823362092407 843.6248293160526 771.3742549987877 531.0157990915371 786.4032110318948 340.5445028213203 634.5851045460766 660.7622061702369 665.8356493094725 783.0965006862427 1.184022453840458 0.8259816785358932 1.0772935756663038 0.9850309052879401 0.6780975251788223 1.0042226090178596 0.4348691413164208 0.8103536460576408 0.8437813291097561 0.8502600237978177 1.0 9.613046291011415 -2.0000018754387248 0.9411722270767433 0.8781074170570016 184.11786532046838 0.20779778753082534 0.17414022097806597 1566.9537000012626 2.6869979195467395 0.026660126924899424 618109.1141043537 0.009999956816520736 2.0000018754387248 183.23975790341137 RQEENDKLR ddPTM_A549_MK2206_60min_R1 2 RQEENDKLR 9 2 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 52.79 0.007734100000000001 10002100.0 1586.65 1780.4299999999998 1627.5100000000002 1504.0 1988.21 1398.02 1549.9 1536.56 2179.8 2673.9 2636.7 False True 1854.437730131869 1871.04628216861 1858.315390684459 1872.480067517126 1695.7469427658616 1545.9575484694296 1831.4967677694451 1754.3720855176448 1686.0787804253202 2069.8641328957992 1981.9346207820206 0.9356704861435619 0.9440504558270157 0.9376269889019929 0.9447738829943307 0.8556018573896061 0.7800244933707422 0.9240954512650793 0.8851816135213454 0.8507237134593455 1.044365495809889 1.0 10.952693656959813 -4.06277458929652 18.519800072115025 0.9147861363791082 0.9041371794012583 0.0 0.06973736662781789 0.0 0.0 0.00928154513895166 0.0 8.65416977288073e-05 4.06277458929652 -0.010648956977849955 RQEENDKLR ddPTM_A549_PD325901_60min_R1 1 RQEENDKLR 9 2 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 59.757 0.0028752 4016700.0 1305.8 1491.4 1344.6 1130.7 1710.3 1345.7 1417.7 1383.9 1419.0 1423.2 1463.9 False True 1438.3638547208463 1617.0855120687552 1435.8526417366413 1200.540770993984 1590.1744282146906 1334.7410653654129 1471.6513492952076 1356.2970288514518 1359.3643647054244 1333.338909115169 1283.8495804266793 1.120352319033212 1.2595599490178024 1.1183963165368989 0.9351101478687184 1.2385987053765335 1.039639756646429 1.1462801964745073 1.0564298571493829 1.0588190278908283 1.0385476067001884 1.0 10.326260466651334 -2.0000006389346945 0.07544962750375658 0.8947486242699677 1.6155881760310289 0.21617579814836463 0.08230135969905228 162.489409813459 0.8736335810859749 1.323459734663078 12.29602943851398 0.009999985287995793 2.0000006389346945 0.7208395517610612 RQEHGHQETR ddPTM_A549_MK2206_60min_R1 2 RQEHGHQETR 10 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 0 ; 89.54799999999999 0.00021393 9991400.0 648.96 0.0 69.668 296.83000000000004 677.27 499.47 393.83000000000004 548.64 520.79 536.37 587.71 False True 758.4885824513142 0.0 79.54796998986485 369.553363325205 577.6444801741441 552.3235838786469 465.3838131819085 626.411400139533 402.83189653073777 415.20364447485673 441.76538702916577 1.716948870874843 0.0 0.18006836281316224 0.8365376151590771 1.3075820268734804 1.2502645071244163 1.0534637317594633 1.4179730203674303 0.911868399739843 0.9398736448481524 1.0 8.787136575607795 -6.517515614213304 23.63350131696321 1.043838951120638 0.5589714201485524 0.18320469322204114 0.43477434848826624 132.19777741587154 582547.5678183305 0.057792420996108804 0.12337485307130334 3.0372768906005894e-07 6.517515614213304 -0.4848675309720857 RQEMESGIT(ph)TPPK ddPTM_A549_PD325901_60min_R1 1 RQEMESGITTPPK 13 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 RQEMES(0.013)GIT(0.522)T(0.466)PPK 51.147 0.016538999999999998 27490000.0 3088.3 3065.6 2502.5 3051.6 3166.6 2442.4 2565.9 2749.3 2564.5 2777.7 3816.1 True False 3401.8219425137 3323.948870724136 2672.3346987549817 3240.0904013135573 2944.18894017695 2422.5099041751387 2663.5467286143553 2694.463054715875 2456.722983288976 2602.315547954752 3346.7438922510105 1.0164572049836906 0.9931888957563638 0.7984879586820063 0.9681321623729868 0.8797174313199977 0.7238408381902701 0.7958621317817245 0.805099864663856 0.7340636339031581 0.7775663844431318 1.0 11.708542438460245 -5.693268027638174 7.241514078037894 0.8550476630012898 1.0079710763090624 0.3513079704529034 0.08616938240094542 0.2609356896496844 22.877817646888868 0.01508279684195163 0.059003120617148616 2.0264317081387724e-06 5.693268027638174 0.1529234133077726 RQEMESGIT(ph)TPPKMR ddPTM_A549_PD325901_60min_R1 2 RQEMESGITTPPKMR 15 2 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 RQEMES(0.016)GIT(0.56)T(0.424)PPKMR;RQEMES(0.002)GIT(0.499)T(0.499)PPKMR 62.94 0.0016111 23106800.0 2243.0 2408.69 2497.6 2519.3 2557.3999999999996 3322.3 2533.3 2625.2 2940.0 2577.8999999999996 2951.6000000000004 True False 2470.707708790671 2611.6787595982887 2667.102155288888 2674.9114392545707 2377.7770465510425 3295.2442903050555 2629.706117774953 2572.8383265704397 2816.4420241254024 2415.1309540528337 2588.57191173399 0.9544674797678825 1.008926484815645 1.0303372848940069 1.0333541158849804 0.9185671202614017 1.2729970047838817 1.0158906947319106 0.9939219053207562 1.0880292764355812 0.932997435035531 1.0 11.337940682158177 -4.533488352019769 0.7664440254357315 1.0458113692519406 0.7519638429616695 0.04808414152298546 0.08933071753844854 12.596150137336874 2.385031629887312 0.012605861735605146 4.136085575689397 2.9275993898953393e-05 4.533488352019769 -0.2938475262902711 RQEMESGITT(ph)PPK ddPTM_A549_MK2206_60min_R1 3 RQEMESGITTPPK 13 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 RQEMES(0.013)GIT(0.081)T(0.906)PPK;RQEMESGIT(0.009)T(0.991)PPK;RQEMES(0.001)GIT(0.121)T(0.878)PPK 89.541 0.00011585 58039000.0 9455.1 8374.1 7022.200000000001 7286.200000000001 10490.5 7680.9 7872.200000000001 8245.599999999999 11915.8 12664.6 13962.3 True False 11050.889724999108 8800.305921326959 8018.0535520300455 9071.319327089952 8947.361346681315 8493.687739831217 9302.476840592695 9414.439051090932 9216.890325622548 9803.658064053301 10495.075570123565 1.052959519077479 0.8385176326294282 0.7639824504794532 0.864340543951238 0.8525294826987103 0.8093021992152474 0.8863658749703669 0.8970339458908814 0.8782109537029309 0.9341198163414346 1.0 13.357424934388186 -10.474875257680402 0.5299158748151629 1.0168937204257276 0.8605740854007925 0.19267700864206738 0.07059046597461235 1.0395785579303545 0.4533693212639496 0.0793398900577688 0.016010015672597463 3.350616650345984e-11 10.474875257680402 -0.15631963502493507 RQEMESGITT(ph)PPK ddPTM_A549_PD325901_60min_R1 1 RQEMESGITTPPK 13 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 RQEMESGIT(0.036)T(0.964)PPK 86.54799999999999 0.00013243 23821000.0 7534.8 6697.7 6771.4 6756.7 6895.0 5514.0 5432.0 5439.9 6729.5 7489.1 8256.4 True False 8299.727349173409 7262.13868458019 7230.947923736058 7174.04601342093 6410.718986458684 5469.0958121608755 5638.717732504457 5331.396926981008 6446.682517466629 7016.236947902198 7240.915141631829 1.1462262969295016 1.0029310580960045 0.9986234864377206 0.9907650998661158 0.8853465150558235 0.755304502978659 0.7787299840160401 0.736287723678462 0.8903132257967313 0.9689710224004922 1.0 12.821956328221864 -5.530447716329016 0.9973110158435086 0.9027777636754261 1.1871525049675267 0.45559060566584064 0.08922458545690198 1.2655758873236918 1.2795132795882482 0.016528719167510357 0.345308129608374 2.94816837816283e-06 5.530447716329016 0.2843747412921006 RQEQIAK ddPTM_A549_MK2206_60min_R1 2 RQEQIAK 7 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 ; 89.14200000000001 0.012824 6921100.0 4119.4 4064.7 3346.7999999999997 2491.8 3811.6 3671.2 3295.6 3692.9 4137.3 5706.3 6258.5 False True 4814.654010339534 4271.575868262582 3821.426565454437 3102.2911118611532 3250.918689195989 4059.683947254667 3894.367861062638 4216.379884031933 3200.208155910486 4417.242866802535 4704.341724187158 1.0234490376379781 0.908007138660967 0.8123190851138102 0.6594527552942987 0.6910464587386453 0.8629653595065144 0.8278241865466369 0.8962741508240374 0.6802669413781659 0.9389715130793926 1.0 12.199777146257238 -11.069347057066555 1.3898754759333567 0.9997966053494145 0.7992587316583218 0.21185881832334408 0.10648167734288785 0.4378194636628691 1.511967322794967 0.0812373107308978 0.01803025024367002 8.524186497896455e-12 11.069347057066555 -0.20053787369109266 RQEQIAK ddPTM_A549_PD325901_60min_R1 2 RQEQIAK 7 1 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 0 ; 96.492 0.011881999999999998 14405900.0 5172.3 4713.9 4478.6 4215.6 5379.8 4732.5 3538.3999999999996 4377.1 4653.2 5632.1 5815.6 False True 5697.38808835399 5111.1568964334865 4782.544728009615 4475.988037677753 5001.941407302455 4693.960089055373 3673.055748286774 4289.795306731479 4457.642185938882 5276.488244819801 5100.318068125825 1.117065252059381 1.0021251279161192 0.9376953876460924 0.8775899812308195 0.9807116616043674 0.9203269338024297 0.72016209562328 0.8410838793643741 0.87399297973134 1.0345410177053354 1.0 12.316371504491164 -5.363085128078711 1.639378847995324 0.9141531609100358 1.1659616639785355 0.37582921355567744 0.0811497584032087 0.7213479260879684 2.1418465059688194 0.012208553674184738 0.26862326949456716 4.3342591223416e-06 5.363085128078711 0.25180850306849967 RQEQPSIEST(ph)SPISR ddPTM_A549_MK2206_60min_R1 2 RQEQPSIESTSPISR 15 1 Q5T5P2;Q5T5P2-3 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 RQEQPSIES(0.018)T(0.491)S(0.491)PISR;RQEQPSIES(0.018)T(0.491)S(0.491)PISR 136.66 6.377100000000001e-10 30119000.0 4082.8 4129.5 3612.5 4081.5 4608.9 4285.1 3948.7 3815.8999999999996 5674.9 5531.6 5416.700000000001 True False 4771.876825123623 4339.6739114794 4124.806820755393 5081.467683225497 3930.9369153729117 4738.546437780832 4666.127677199307 4356.815510703635 4389.544210953135 4282.007718136954 4071.58389668524 1.1719952102690323 1.0658441583415283 1.0130717984501028 1.2480321693389211 0.965456445235764 1.1638091116429112 1.1460227261921576 1.0700542150809191 1.0780925365499046 1.0516810722291698 1.0 11.991374414626142 -10.033552740032142 0.5691219288296029 0.997670880312544 1.1058376354585775 0.1305230240922427 0.07563892739412538 0.9794690783278577 0.6128446290318417 0.04949268852105571 0.016838719081772972 9.256509687115928e-11 10.033552740032142 0.10816675514603347 RQEQPSIEST(ph)SPISR ddPTM_A549_PD325901_60min_R1 1 RQEQPSIESTSPISR 15 1 Q5T5P2;Q5T5P2-3 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 RQEQPSIES(0.138)T(0.724)S(0.138)PISR 96.56200000000001 1.0371e-05 14052000.0 3157.0 3312.3 2861.0 3753.2 3858.7 4339.1 3597.9 3124.2 3592.6 3284.6 4207.3 True False 3477.4963159394365 3591.4391455178597 3055.164664590608 3985.0266398643503 3587.6782237923303 4303.763808224018 3734.8200533464246 3061.8853801125138 3441.615515603034 3077.209795446657 3689.828772272127 0.9424546586203945 0.9733349071659819 0.8279963253441962 1.0800031345114278 0.9723156398889224 1.1663857793525312 1.0121933249077553 0.8298177419834749 0.9327304132553967 0.8339708927880058 1.0 11.849338153759271 -6.257857702104107 24.98596660381315 0.9812858345660342 0.920469270421694 0.0772137251430125 0.09733930423015645 645.6191938452346 4503854.8153268015 0.012426806944542072 0.0314751769724192 5.522583587554021e-07 6.257857702104107 -0.060816564144340224 RQEVS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 RQEVSSPR 8 1 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 RQEVS(0.5)S(0.5)PR 64.711 0.007468600000000001 8858900.0 362.91 402.93 425.68 240.54 401.32 366.68 322.57 383.84 593.63 529.38 668.53 True False 424.16033570236425 423.43741594682075 486.0478249021887 299.4723107982508 342.28635962538937 405.48183421751526 381.176793586289 438.25049546069954 459.173752832316 409.7926903296224 502.5155505106398 0.8440740495917917 0.8426354478314901 0.9672294208771905 0.5959463552798254 0.6811458058911196 0.8069040526317602 0.7585373093408745 0.8721133008030573 0.9137503354189113 0.8154826052909299 1.0 8.973024431434363 -8.827714114931428 1.1156080561903572 0.9731106413449014 0.7831133655790954 0.16867369856321257 0.10270462499474929 0.31105309105602025 0.7736936147974213 0.02082587919029913 0.02138077906963742 1.4869141181396112e-09 8.827714114931428 -0.18999727576580605 RQEVSS(ph)PR ddPTM_A549_PD325901_60min_R1 4 RQEVSSPR 8 1 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 RQEVS(0.138)S(0.862)PR;RQEVS(0.324)S(0.676)PR;RQEVS(0.165)S(0.835)PR;RQEVS(0.097)S(0.903)PR 121.9 0.00048971 142171000.0 2475.85 2943.2300000000005 2738.14 2522.99 3606.91 3169.34 2639.39 3297.7400000000002 2474.1 3405.0 3325.88 True False 2727.1964693755626 3191.266321366585 2923.9666461734105 2678.829362173971 3353.5730847639893 3143.5299458313284 2739.8334307796267 3231.963988673016 2370.1221809145086 3190.007718899065 2916.8178444903942 0.934990326710662 1.094091743642682 1.002450890684353 0.9184081780197683 1.1497368925860716 1.0777258346005985 0.9393227746308961 1.1080445063711828 0.8125712016578119 1.0936602451622757 1.0 11.51017957728968 -8.755623410669271 24.998874494050483 0.9114919565779195 1.0285349850928516 0.0 0.09911019166163575 146.6284962757121 630255.2056386784 0.01587706316993551 0.017767467906103455 1.7554020020239306e-09 8.755623410669271 0.11704302851493209 RQEVSS(ph)PRK ddPTM_A549_MK2206_60min_R1 1 RQEVSSPRK 9 2 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 RQEVS(0.113)S(0.887)PRK 68.355 0.00092427 9140300.0 1221.2 1346.0 1086.8 920.85 1832.4 1339.6 1281.3 1113.0 2036.6 2605.7 1871.6 True False 1427.3087045265418 1414.5056507691666 1240.9245820891242 1146.4582913385268 1562.8563873656026 1481.355582845487 1514.0956245841585 1270.7711584195472 1575.3133517819092 2017.0705602627556 1406.8300664677936 1.0145565825943463 1.0054559427498195 0.8820714112293481 0.8149230803809897 1.1109063024858097 1.0529740713921538 1.0762462792579366 0.9032868920765554 1.1197609358301077 1.433769869112285 1.0 10.458232358033694 -6.779125387576191 24.999948297349174 1.05035470403931 0.9313248384914726 0.21410607149863958 0.13775173638155924 211.4368492013938 298874.977366164 0.011595080202971533 0.021946738504830372 1.6629324665706152e-07 6.779125387576191 -0.11902986554783734 RQEVSS(ph)PRK ddPTM_A549_PD325901_60min_R1 1 RQEVSSPRK 9 2 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 RQEVS(0.483)S(0.517)PRK 51.251999999999995 0.0054297 15375000.0 1805.6 1499.0 1768.2 1732.5 1746.9 1900.8 1675.8 2107.1 2018.0 1592.1 2145.2 True False 1988.9031827875342 1625.3259907409574 1888.2006850503715 1839.512590207019 1624.203770477836 1885.3205150082308 1739.5734860329455 2065.072237512027 1933.1904777840352 1491.5745342905138 1881.3539995432147 1.0571658408095617 0.8639129005681973 1.003639232972008 0.9777599487675607 0.8633164045002623 1.0021083302057876 0.9246391090965905 1.0976521367129304 1.0275527509726539 0.7928197110446318 1.0 10.877555619612512 -8.228306113458265 24.994964492332983 1.019722666010349 0.9533985423454826 0.0 0.09106228264883807 693.6717094658613 523290.75192382245 0.008827493045242307 0.011395941318366487 5.911448175197972e-09 8.228306113458265 -0.06632412366486651 RQFS(ph)ALVPAFDPR ddPTM_A549_MK2206_60min_R1 2 RQFSALVPAFDPR 13 1 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RQFS(1)ALVPAFDPR;RQFS(1)ALVPAFDPR 51.695 0.01072 6099200.0 187.97 285.08000000000004 121.52 247.64999999999998 396.36 318.2 301.1 371.75 159.17 295.01 247.45 True False 219.694740574725 299.58935432486925 138.75336328254545 308.3242611174311 338.055969054917 351.8717127959347 355.80597249847057 424.4467009366276 123.11824914225986 228.36703610665657 186.00133572742862 1.1811460370191726 1.6106838865065762 0.7459804669676049 1.6576454137364787 1.8174921579612382 1.8917698167048487 1.9129215986915182 2.281955122938597 0.6619213171817253 1.227770946985627 1.0 7.539169171540386 -8.785378994827601 24.995130780706077 0.8403516375058668 1.6311760422355903 0.3445236520867794 0.40453741832321016 154.25691394483349 161057.4606393866 0.0713766556487885 0.07600560477729003 1.639158707778454e-09 8.785378994827601 0.7908244047297235 RQFS(ph)ALVPAFDPR ddPTM_A549_PD325901_60min_R1 2 RQFSALVPAFDPR 13 1 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RQFS(1)ALVPAFDPR;RQFS(1)ALVPAFDPR 66.965 0.0019367000000000002 13416700.0 346.07000000000005 465.17 580.6600000000001 592.55 459.15 415.45 435.65 426.33 459.80999999999995 523.61 535.47 True False 381.2027716367313 504.37150841425716 620.0670793922347 629.1504677213101 426.9008879815088 412.06671294200834 452.228899146827 417.8265137005849 440.48578473234716 490.5491752401586 469.6105846240002 0.811742290566015 1.0740207417132406 1.3203856550394824 1.3397280391902742 0.9090529514434018 0.8774647046593613 0.9629870236185369 0.8897297620221297 0.9379809551887077 1.044587135174824 1.0 8.875321115710898 -6.798159902960905 24.998382902917683 0.9525296196508467 1.145145905479563 0.3068458857937568 0.13728070940635362 155.64972796531006 105961.90814926362 0.019795759183585178 0.03741121563608021 1.5916225993525952e-07 6.798159902960905 0.19261628582871626 RQFS(ph)ALVPAFDPRPGR ddPTM_A549_MK2206_60min_R1 4 RQFSALVPAFDPRPGR 16 2 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RQFS(1)ALVPAFDPRPGR;RQFS(1)ALVPAFDPRPGR;RQFS(1)ALVPAFDPRPGR;RQFS(1)ALVPAFDPRPGR 58.023999999999994 0.0015728 28361000.0 2703.87 2751.11 2804.09 2774.07 4234.039999999999 2908.03 3043.8599999999997 2947.96 4847.25 4248.81 4684.76 True False 3160.2171527253377 2891.12974805911 3201.7521267853276 3453.7172745327357 3611.2183247988705 3215.755804405913 3596.8899616379745 3365.8423577488657 3749.35561446767 3289.000870073302 3521.4047992015717 0.8974308075691474 0.8210160185828771 0.9092258088338152 0.9807782607997289 1.0255050273168431 0.9132025392636028 1.0214360934742628 0.9558237549150903 1.0647329200317392 0.9340024954867546 1.0 11.781935364811934 -6.117678476208164 0.5804219410583976 1.0246900124780864 0.8133241733188036 0.3809768759886901 0.052850948223964536 0.8386081254725726 0.32937403630347634 0.008904262346395958 0.09840553464159243 7.626434133658898e-07 6.117678476208164 -0.21136583915928286 RQFS(ph)ALVPAFDPRPGR ddPTM_A549_PD325901_60min_R1 5 RQFSALVPAFDPRPGR 16 2 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RQFS(1)ALVPAFDPRPGR;RQFS(1)ALVPAFDPRPGR;RQFS(1)ALVPAFDPRPGR;RQFS(1)ALVPAFDPRPGR;RQFS(1)ALVPAFDPRPGR 66.325 0.00052503 42854900.0 4765.76 4963.84 4427.26 4919.75 5942.65 5630.570000000001 4900.009999999999 5220.01 5735.08 5365.25 5604.53 True False 5249.576446832916 5382.160217397994 4727.720486877114 5223.631783937079 5525.258765029546 5584.716504729531 5086.4825619383555 5115.892805531377 5494.054531877932 5026.487199360705 4915.208340042855 1.068027250048804 1.095001441454884 0.9618555633464551 1.0627488038261945 1.124114866101764 1.1362115536858075 1.0348457705241458 1.0408292897482292 1.117766359386921 1.0226397034712225 1.0 12.263036853776555 RQFS(ph)APNLK ddPTM_A549_MK2206_60min_R1 2 RQFSAPNLK 9 1 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 RQFS(1)APNLK;RQFS(1)APNLK 113.38 0.0001004 37423000.0 4145.8 5233.6 4994.700000000001 4484.0 6639.7 5214.9 5013.5 5609.1 8306.7 7695.3 7668.0 True False 4845.509684921501 5499.96788548701 5703.023564741031 5582.580201294406 5663.008925557404 5766.737256629542 5924.388054204858 6404.2071021483225 6425.245713074138 5956.9263853820385 5763.823973966149 0.8406762085045517 0.9542220425760891 0.9894513764646978 0.9685549431262337 0.9825089994309154 1.0005054426846745 1.0278572144055647 1.1111038663003303 1.1147539796661863 1.0335024824297354 1.0 12.492810561228897 -4.141016274538415 0.42498728597254287 1.055983697678417 0.41237054894589603 0.6934079525078579 0.03959484822918554 6.125122455368967 0.3629988730365425 0.01143507102446808 2.4665723688915473 7.227427193885066e-05 4.141016274538415 -0.643613148732521 RQFS(ph)APNLK ddPTM_A549_PD325901_60min_R1 2 RQFSAPNLK 9 1 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 RQFS(1)APNLK;RQFS(1)APNLK 130.1 2.0828e-05 94268000.0 7812.8 9509.3 9768.3 9319.0 10198.5 10279.099999999999 9162.7 10698.0 9661.599999999999 9072.7 10995.0 True False 8605.949704520623 10310.682083891244 10431.235579559749 9894.613465015422 9482.19254291499 10195.39041762474 9511.391562521829 10484.619997581349 9255.55655111904 8499.848173643335 9642.684703047576 0.8924848182374673 1.0692750412789653 1.0817771088442776 1.0261264128949714 0.9833560709413363 1.0573186546691171 0.9863841715695368 1.0873133697161828 0.959852658896315 0.8814814997484002 1.0 13.235219160218605 -8.817928067396561 24.99999863427757 0.9810415318581888 1.0252124996488576 0.17897276586103128 0.06151577978786861 124.30612131626654 55012.981782606876 0.008830343920129014 0.009400618381752171 1.5207994003079388e-09 8.817928067396561 0.04417096779066887 RQGKGDS(ph)PEAR ddPTM_A549_PD325901_60min_R1 1 RQGKGDSPEAR 11 2 P18206;P18206-2 P18206 VCL Vinculin 1 RQGKGDS(1)PEAR 49.31 0.0058809 2532100.0 617.05 725.89 603.1 576.76 734.07 536.53 492.73 629.37 466.57 501.99 746.93 True False 679.6924617517988 787.0632978111764 644.0299927349165 612.3851552830017 682.5114556040215 532.1606775659544 511.48110978220166 616.8167216187863 446.9616854408807 470.2942657298505 655.0623451793839 1.0375996525424922 1.2015089916298656 0.9831583168752491 0.9348501860770285 1.041903050338088 0.8123817243994176 0.7808128700209999 0.9416152922816464 0.6823193070553972 0.7179381767105908 1.0 9.35548841062443 -6.516140345092046 0.9518805154588251 0.8480240337681662 1.1153716264843854 0.49195734538668656 0.10686638033236842 0.5245292778488797 0.8415523506401329 0.020705637743057104 0.09125121576594845 3.0469102016284045e-07 6.516140345092046 0.2673475927162192 RQGS(ph)FSEDVISHK ddPTM_A549_MK2206_60min_R1 4 RQGSFSEDVISHK 13 1 H3BPE1;H3BQK9;E9PNZ4;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RQGS(0.978)FS(0.022)EDVISHK;RQGS(0.996)FS(0.004)EDVISHK;RQGS(0.793)FS(0.207)EDVISHK;RQGS(0.983)FS(0.017)EDVISHK 124.5 9.190100000000001e-07 82668800.0 13412.16 12894.789999999999 11323.74 10372.480000000001 18360.53 12961.98 11733.21 13770.679999999998 19848.8 19666.1 19983.6 True False 15675.804712170575 13551.079732898768 12929.616605802268 12913.73806563832 15659.720359047009 14333.608120134035 13864.982379869753 15722.71606093879 15353.078492020406 15223.514351300359 15021.120600697679 1.0435842390775085 0.9021350732161333 0.8607624523833284 0.8597053714513497 1.042513456573917 0.9542302802274478 0.9230324919450931 1.0467072649831815 1.0220994092349747 1.013473944852908 1.0 13.874704823877277 -7.6208189516927245 0.9475524599192607 1.0119868514075232 0.9240326483212274 0.2359300933614945 0.060799953952538933 0.5285944818219581 0.9546572881679531 0.010972046862575914 0.02062779493009056 2.3943136877979112e-08 7.6208189516927245 -0.08795420308629576 RQGS(ph)FSEDVISHK ddPTM_A549_PD325901_60min_R1 5 RQGSFSEDVISHK 13 1 H3BPE1;H3BQK9;E9PNZ4;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RQGS(0.883)FS(0.117)EDVISHK;RQGS(0.984)FS(0.016)EDVISHK;RQGS(0.904)FS(0.096)EDVISHK;RQGS(0.997)FS(0.003)EDVISHK;RQGS(0.499)FS(0.499)EDVIS(0.001)HK 150.39 1.6929e-13 87141000.0 10927.8 10636.1 11331.1 12505.300000000001 11988.0 12016.3 11954.800000000001 12960.800000000003 12421.8 13310.2 13854.699999999999 True False 12037.18221137883 11532.441474396204 12100.09658543959 13277.723979403076 11146.004236354858 11918.443236791572 12409.74645591758 12702.28667644909 11899.754943973103 12469.79170046706 12150.659732179463 0.9906607934629176 0.9491206015632232 0.9958386500935449 1.0927574528516115 0.9173167944812162 0.9808885689743335 1.0213228523758229 1.0453989294761266 0.979350521392524 1.0262645794814265 1.0 13.568747028072185 RQGS(ph)VVSSR ddPTM_A549_MK2206_60min_R1 2 RQGSVVSSR 9 1 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 RQGS(0.994)VVS(0.006)S(0.001)R;RQGS(0.996)VVS(0.004)SR 56.93600000000001 0.011682 14617100.0 720.2 731.2 633.03 490.16999999999996 1069.39 567.67 367.47 478.13 858.24 1111.74 939.94 True False 841.7521528005367 768.4149567922842 722.803172800771 610.2616720045677 912.0841476123667 627.7404626111507 434.23454239127534 545.9063917117144 663.8500103276565 860.5971618630368 706.5269569757094 1.191394248286943 1.0875946759080313 1.0230369353417625 0.8637486029079406 1.2909403365393806 0.8884876315239203 0.6146043517575288 0.7726618019621901 0.9395961523807503 1.218066987205733 1.0 9.464600796269172 RQGS(ph)VVSSR ddPTM_A549_PD325901_60min_R1 2 RQGSVVSSR 9 1 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 RQGS(0.999)VVS(0.001)SR;RQGS(1)VVSSR 159.09 8.026900000000001e-06 25095000.0 1512.79 1521.1 1575.2199999999998 1886.7 2123.78 1936.13 1942.77 1713.29 1396.77 1993.2399999999998 1657.0 True False 1666.3673271428618 1649.2884353009142 1682.1239017673604 2003.2371739934104 1974.613019443252 1920.362799201856 2016.7031754745365 1679.1170868999961 1338.068614298516 1867.3864862315331 1453.199504588434 1.1466886149364603 1.1349360016249217 1.157531293161128 1.3785011401863605 1.358803807191284 1.3214722363573397 1.3877675908275888 1.1554621933177338 0.9207742020786578 1.2850172879465733 1.0 10.505017063697727 -8.596293548539473 4.282821287331735 0.9631983013023316 1.2700122633547222 0.2183020175304332 0.13139601800494674 0.09290444486503009 3.328890059776934 0.016873520064712964 0.019243915836672617 2.5334156640888462e-09 8.596293548539473 0.30681396205239053 RQHEAEEGVR ddPTM_A549_MK2206_60min_R1 2 RQHEAEEGVR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 92.23899999999999 0.00019623 64323000.0 724.56 657.9000000000001 657.37 700.8499999999999 929.02 554.98 619.51 654.69 795.1500000000001 1253.52 1322.83 False True 846.8480142087708 691.3842998818982 750.594950798608 872.558281462352 792.3623886653523 613.707615234091 732.0669479326722 747.4943124040366 615.0497945936289 970.3489613925509 994.3348027493004 0.8516729092326509 0.6953234443471608 0.7548714464416207 0.877529660080045 0.7968768532233796 0.6172041987640494 0.7362378807505612 0.7517531422386518 0.6185540251563539 0.9758774999221294 1.0 9.957587893612946 -10.963898940422515 1.2258947796600186 1.0001958231645287 0.732951574223986 0.5830656545756697 0.07882973191658754 0.26904271378896705 0.7180738942176208 0.06016506323723871 0.01389961532639165 1.0866784624037916e-11 10.963898940422515 -0.26724424894054266 RQHEAEEGVR ddPTM_A549_PD325901_60min_R1 3 RQHEAEEGVR 10 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ;; 110.38 5.9243e-05 57105200.0 1107.58 1176.91 815.34 1282.18 1118.85 889.6500000000001 657.0799999999999 904.8599999999999 1053.64 1080.33 1169.3899999999999 False True 1220.0207062426991 1276.092336066004 870.6738754377169 1361.3773465579427 1040.265835822959 882.4049853625173 682.0855389679723 886.8118574510627 1009.3591749317986 1012.1177794297287 1025.5624433739697 1.1896113338832754 1.244285361959846 0.848972074848325 1.3274446186613316 1.0143369060986838 0.8604107834326669 0.6650843577344718 0.8647078129475615 0.9842006027552409 0.9868904482305243 1.0 10.002199620461669 -6.989115887256353 24.71041661301524 0.9458151849123192 1.1416237307959032 0.3838898909182862 0.145163024753828 199.10962318296606 452038.8353791438 0.021625640104682195 0.04084095069617118 1.0253782775274351e-07 6.989115887256353 0.19580854588358398 RQIDS(ph)SEEDDDEEDYDNDKR ddPTM_A549_PD325901_60min_R1 1 RQIDSSEEDDDEEDYDNDKR 20 2 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 RQIDS(0.5)S(0.5)EEDDDEEDYDNDKR 54.288000000000004 0.0019209 1727900.0 312.87 309.25 298.61 211.99 452.29 252.99 245.56 375.09 395.99 408.39 314.65 True False 344.63233207727944 335.31158281296956 318.87547028780233 225.08414083577833 420.5227107157936 250.92973331856712 254.90492017558796 367.6085356975872 379.34791739231895 382.6041857037267 275.95004473068855 1.2488939163377228 1.2151169721324542 1.1555550592463448 0.8156698834944839 1.5239088333042299 0.9093302868041213 0.9237357450851678 1.3321561011390741 1.3746977927202035 1.3864980021189217 1.0 8.108263309160964 RQIS(ph)EETESVDNR ddPTM_A549_MK2206_60min_R1 4 RQISEETESVDNR 13 1 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 RQIS(1)EETESVDNR;RQIS(0.999)EET(0.001)ESVDNR;RQIS(0.996)EET(0.003)ES(0.001)VDNR;RQIS(0.998)EET(0.001)ES(0.002)VDNR 141.0 2.2233e-12 19341600.0 2531.42 2430.24 1728.51 2080.64 3337.49 2375.1099999999997 2395.32 2592.7799999999997 2960.13 3706.85 3665.1 True False 2958.6618087230427 2553.928835605692 1973.6387094100774 2590.3968934034797 2846.5496421462676 2626.4425637295813 2830.5186384757103 2960.3145050557328 2289.665281356272 2869.470010480867 2754.954518385932 1.073942160924115 0.9270312154198406 0.7163961133436023 0.9402684785232451 1.0332474177519269 0.9533524224089032 1.0274284455824882 1.0745420606036418 0.8311081965511856 1.0415671080341564 1.0 11.427812786166072 -5.259730285483616 22.095015620981293 0.9331559479355881 1.073942390738896 0.06932093503221037 0.10135953830035348 47.89141687732629 618815.6917136551 0.014256358659459695 0.12439565529490809 5.498822670638255e-06 5.259730285483616 0.140786442803308 RQIS(ph)EETESVDNR ddPTM_A549_PD325901_60min_R1 2 RQISEETESVDNR 13 1 P46934-3;P46934-2;P46934;H0Y8X6;P46934-4 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 RQIS(1)EETESVDNR;RQIS(1)EETESVDNR 86.488 9.161299999999999e-05 9376500.0 905.71 880.4000000000001 1016.3499999999999 991.8 1213.8899999999999 1147.5900000000001 1013.0 1063.14 1132.25 1202.83 1094.13 True False 997.6570124515379 954.5943977640684 1085.3256228090406 1053.0612334587722 1128.6305540931596 1138.2444075222518 1051.5502693348692 1041.9348386828049 1084.6654700054376 1126.8831085237475 959.5589462615234 1.0397037267365865 0.9948262183195759 1.1310671710555238 1.0974429841559366 1.1761972086137547 1.1862162423235108 1.0958683397531204 1.0858476623476034 1.1303791958079634 1.174376116145991 1.0 9.906227624509139 -4.057840007489004 15.941492042258675 1.0814088236873867 1.098050481245435 0.0 0.06730225825450613 0.0 0.0 0.009562543964010631 0.0 8.75306175456639e-05 4.057840007489004 0.01664165755804836 RQLAELETEDGMQES(ph)P ddPTM_A549_MK2206_60min_R1 4 RQLAELETEDGMQESP 16 1 Q96QG7-2;Q96QG7 Q96QG7-2 MTMR9 Myotubularin-related protein 9 1 RQLAELETEDGMQES(1)P;RQLAELETEDGMQES(1)P;RQLAELETEDGMQES(1)P;RQLAELETEDGMQES(1)P 89.911 4.4972e-06 11825500.0 4447.38 5439.32 4027.34 4377.76 6683.699999999999 4949.0 5054.87 5279.42 8031.499999999999 6830.2 6536.1 True False 5197.989015998405 5716.158154785843 4598.4773706577225 5450.311396525116 5700.53658384385 5472.699895119676 5973.274447702903 6027.79395254566 6212.37807367004 5287.253076220082 4913.005982816915 1.058005838824176 1.1634746985405529 0.9359804133641916 1.1093638834529023 1.160295062489502 1.1139208692723503 1.215808502695548 1.226905477751845 1.2644759838269357 1.076174768504676 1.0 12.262390280595113 -6.51496024634934 24.036881651847068 1.1432898453435603 1.0567668276715914 0.20236203385515772 0.0848004073992631 390.76980509183505 1186190.944230522 0.01570681888927223 0.033933641980321755 3.055200761772492e-07 6.51496024634934 -0.0865230176719689 RQLAELETEDGMQES(ph)P ddPTM_A549_PD325901_60min_R1 2 RQLAELETEDGMQESP 16 1 Q96QG7-2;Q96QG7 Q96QG7-2 MTMR9 Myotubularin-related protein 9 1 RQLAELETEDGMQES(1)P;RQLAELETEDGMQES(1)P 124.2 1.8058000000000002e-08 14419700.0 4293.799999999999 4996.5 4608.6 4614.6 5052.3 5460.9 4377.0 4555.7 5130.7 6143.5 5937.3 True False 4729.703415071506 5417.572590218273 4921.367309763121 4899.633361483009 4697.44387748879 5416.428240955627 4543.5691301863035 4464.83298962249 4915.074521489867 5755.5983615437335 5207.049739645688 0.9083269128505267 1.0404303513695474 0.945135452095373 0.9409615053564676 0.9021315547887251 1.0402105821489975 0.8725803204052875 0.8574592548306055 0.9439269389088478 1.105347298244816 1.0 12.346250472607348 -10.35216597761451 1.0787647966501042 0.9954331639938683 0.9410797830440528 0.23479199679632567 0.06495172619769245 0.7227378868924742 1.6513853045906026 0.023730482270139373 0.00998560710712968 4.444613718341161e-11 10.35216597761451 -0.054353380949815455 RQLAFST(ph)VGTPDYIAPEVFMQTGYNK ddPTM_A549_PD325901_60min_R1 1 RQLAFSTVGTPDYIAPEVFMQTGYNK 26 1 Q15208 Q15208 STK38 Serine/threonine-protein kinase 38 1 RQLAFS(0.372)T(0.487)VGT(0.141)PDYIAPEVFMQTGYNK 97.04700000000001 1.6214e-09 5133800.0 1185.7 1290.9 1582.3 1507.4 1840.6 1448.4 1868.0 1671.2 1544.5 1622.1 1686.2 True False 1306.0713911337937 1399.6886734139448 1689.68439314286 1600.5086744462108 1711.3226057252866 1436.604710615489 1939.0877622088212 1637.8666049689625 1479.590036143429 1519.6803291706822 1478.8080897024843 0.8831919437204033 0.9464978472599124 1.142598830036696 1.0822964018057346 1.1572310279081452 0.9714612197614594 1.3112504426446159 1.1075585915265576 1.000528768030409 1.0276386366512378 1.0 10.53021912547038 -4.07079738601401 16.026211569076956 1.0372745749902155 1.0497161887830022 0.0 0.11546668235919617 0.0 0.0 0.015258374071698914 0.0 8.495767406795639e-05 4.07079738601401 0.012441613792786743 RQLEEAEEEAQR ddPTM_A549_MK2206_60min_R1 2 RQLEEAEEEAQR 12 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 63.727 0.006925199999999999 2674000.0 369.67 301.94 276.26 376.1 479.99 362.58000000000004 164.8 199.14 422.57 350.43 732.18 False True 432.0612584362323 317.30745630998695 315.4378220904874 468.24451688377053 409.384106838908 400.9479749388752 194.74202679424758 227.3687048406725 326.8585697056275 271.267619615795 550.3594988600067 0.7850527870077417 0.5765457977326552 0.573148683258621 0.8507975566037727 0.7438485347975102 0.7285201323305643 0.35384512704446575 0.4131276107919191 0.5939001150750911 0.4928916829412197 1.0 9.1042304953094 -10.597350380919721 0.9692055025148679 0.9917342145716067 0.6229754132972904 0.0 0.20511353630721593 0.38641488867537804 0.6685070870461599 0.09320473129204021 0.027943245600384414 2.5272582275817884e-11 10.597350380919721 -0.36875880127431626 RQLHLEGASLELS(ph)DDDTESK ddPTM_A549_PD325901_60min_R1 2 RQLHLEGASLELSDDDTESK 20 1 P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35580-2;P35580-5 MYH10 Myosin-10 1 RQLHLEGAS(0.001)LELS(0.999)DDDTESK;RQLHLEGAS(0.001)LELS(0.998)DDDT(0.001)ESK 132.26 1.6564999999999998e-17 40118000.0 3952.0 4157.3 3523.9 4411.4 4813.7 4132.1 3876.0 4914.4 4668.4 4621.3 5249.299999999999 True False 4353.204130691368 4507.650261045619 3763.0530449321377 4683.882158983692 4475.602318363478 4098.449547593391 4023.5033010285815 4816.378436727779 4472.2033827983105 4329.510329324008 4603.669378054356 0.9455944320074433 0.979142916416531 0.8174029748683893 1.017423662374998 0.9721815253933369 0.8902571429500689 0.8739774668025858 1.046204243008285 0.9714432153006595 0.9404477111155591 1.0 12.168568511753241 -8.261343501445685 24.999999998177884 0.9906147643977337 0.9293980236023603 0.2130468907070764 0.05682886188439491 9.933419065352187 2590173.353079329 0.008617063760815964 0.010762968442295259 5.478434814735134e-09 8.261343501445685 -0.061216740795373314 RQLLDS(ph)DEEQEEDEGR ddPTM_A549_MK2206_60min_R1 2 RQLLDSDEEQEEDEGR 16 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 RQLLDS(1)DEEQEEDEGR;RQLLDS(1)DEEQEEDEGR 144.01 1.0884000000000001e-14 7053400.0 726.6800000000001 749.74 624.61 493.72 1165.04 835.0899999999999 700.34 940.9300000000001 1127.63 1042.06 1235.13 True False 849.3258183797474 787.8985636015423 713.1890901901807 614.6814221639331 993.6641593191562 923.4586695121219 827.5827126522048 1074.3097089772716 872.223605455089 806.657922257899 928.4131331461666 0.9148145238979855 0.848650816616031 0.7681807427404178 0.6620774741530498 1.0702823170455051 0.9946635140573085 0.891394879182426 1.1571461783793353 0.9394778836220627 0.86885664738965 1.0 9.858623120676459 -6.771776037599367 24.99970989194996 0.9864282138573369 0.7998572886481202 0.48721774960873687 0.09393887598402145 124.20926447922741 300406.5399112218 0.012355800488581765 0.02353263674971187 1.6913129041437066e-07 6.771776037599367 -0.1865709252092167 RQLLDS(ph)DEEQEEDEGR ddPTM_A549_PD325901_60min_R1 2 RQLLDSDEEQEEDEGR 16 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 RQLLDS(1)DEEQEEDEGR;RQLLDS(1)DEEQEEDEGR 144.88 9.9411e-15 9025200.0 909.64 945.6700000000001 834.39 941.1700000000001 1004.05 1188.1 798.5699999999999 1025.19 1077.33 940.1800000000001 1307.98 True False 1001.9859831584243 1025.3649297291536 891.0167229946723 999.3039333478447 933.5289917844585 1178.4245075132994 828.9600183442715 1004.741781204004 1032.0535666159926 880.816874347878 1147.1067519683638 0.8734897440356608 0.8938705381776292 0.7767513541924002 0.8711516444595077 0.8138117835873434 1.0273015179199287 0.7226528977550064 0.8758921342585855 0.8997014138789201 0.7678595499821189 1.0 10.163783942248504 -9.922069959481641 0.5924940756270141 1.0005590131967166 0.8542012618922822 0.0 0.09951653319986789 0.6325082715531177 0.44792516010588823 0.04263250820836282 0.016611622190307675 1.196547766702394e-10 9.922069959481641 -0.1463577513044344 RQLLS(ph)LLR ddPTM_A549_MK2206_60min_R1 4 RQLLSLLR 8 1 A0A0B4J229 A0A0B4J229 ADAMTS13 1 RQLLS(1)LLR;RQLLS(1)LLR;RQLLS(1)LLR;RQLLS(1)LLR 65.22399999999999 0.007274600000000001 43234000.0 1724.1599999999999 1974.0610000000001 1807.13 1782.02 2625.0 1596.52 1738.23 2030.85 2761.04 2417.1800000000003 2871.04 True False 2015.1560563351486 2074.5322730037396 2063.408207610158 2218.614979997918 2238.8659773164723 1765.4626867157942 2054.0438909864374 2318.7292067172834 2135.6688484748715 1871.1373591955812 2158.0815313270436 0.9337719762125912 0.961285402284163 0.9561307937894871 1.028049657898537 1.0374334541196657 0.8180704301890667 0.9517916080415036 1.074440039942075 0.9896145337760293 0.8670373811340597 1.0 11.075533654872293 RQLLS(ph)LLR ddPTM_A549_PD325901_60min_R1 3 RQLLSLLR 8 1 A0A0B4J229 A0A0B4J229 ADAMTS13 1 RQLLS(1)LLR;RQLLS(1)LLR;RQLLS(1)LLR 65.22399999999999 0.007274600000000001 54963000.0 1637.93 1889.69 1842.24 1538.702 1739.5400000000002 1579.61 1665.74 2104.24 1620.104 1732.5900000000001 1913.6 True False 1804.2114478196636 2048.940808167633 1967.2654846890612 1633.7441278942113 1617.3607114872145 1566.7461798780257 1729.130647227904 2062.2692824556543 1552.0166629434227 1623.1939717143405 1678.239331309854 1.075062069014608 1.220887134475897 1.1722198663724706 0.9734869737673741 0.9637247091717699 0.9335654043188175 1.0303242302623965 1.228829073411161 0.924788636512341 0.967200530598606 1.0 10.712732755787018 -6.260964903367916 24.94223158606672 0.9855791065892038 1.1625394433712801 0.37921258699544613 0.08522355868250706 28.974375915473484 1523063.4644612535 0.012370412799894134 0.030679936172668443 5.48321274607644e-07 6.260964903367916 0.17696033678207634 RQLQEDQENNLQDNQTSNSS(ph)PCR ddPTM_A549_MK2206_60min_R1 2 RQLQEDQENNLQDNQTSNSSPCR 23 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 RQLQEDQENNLQDNQT(0.007)S(0.032)NS(0.159)S(0.802)PCR;RQLQEDQENNLQDNQT(0.001)S(0.005)NS(0.161)S(0.833)PCR 122.04 6.768099999999999e-16 8624800.0 532.11 666.2 722.3 467.81999999999994 575.53 426.51 431.61 454.05999999999995 794.24 662.0899999999999 684.0699999999999 True False 621.9171591595299 700.1067344297319 824.7330011437011 582.4359210012381 490.8702993999809 471.6430051055756 510.0279501496676 518.4243955004308 614.3459081406575 512.5234091585247 514.1965396284585 1.2094930852877905 1.3615547372909316 1.6039256151735795 1.1327106973961496 0.954635555802588 0.9172426664838493 0.9918930036328075 1.0082222565617172 1.1947686551616306 0.9967461265469761 1.0 9.006176091121594 -6.4510476377116 7.548886449289357 1.0578789329705571 1.3873093499598852 0.6712508458559767 0.1137585867224527 0.1586220865024822 14.85070469873998 0.017858932421008805 0.041564309216139156 3.539585132854918e-07 6.4510476377116 0.32943041698932807 RQLQEDQENNLQDNQTSNSS(ph)PCR ddPTM_A549_PD325901_60min_R1 2 RQLQEDQENNLQDNQTSNSSPCR 23 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 RQLQEDQENNLQDNQTS(0.005)NS(0.164)S(0.831)PCR;RQLQEDQENNLQDNQT(0.017)S(0.084)NS(0.311)S(0.588)PCR 123.35 5.0249e-16 11141000.0 751.8299999999999 734.6 682.71 712.96 976.1000000000001 889.6200000000001 701.0799999999999 895.36 472.86 732.27 581.9100000000001 True False 828.1552281320068 796.5073200789245 729.0428060687365 756.9979199503583 907.542103362193 882.3752296725711 727.7599830456965 877.5013424036682 452.9873386149447 686.0343472300201 510.3387590314156 1.6227558919957066 1.5607423617807028 1.4285468096767815 1.4833243733771724 1.7783131053667947 1.7289990502529196 1.4260331400792092 1.7194487521761026 0.8876208804416118 1.3442724760550453 1.0 8.995311404961727 -8.765344352707846 24.99999843040205 0.9469320414397526 1.5883483290331246 0.6370180470338689 0.16572951738358455 24.070292180042284 154099.78066234093 0.020455262855334052 0.022174816093286503 1.7165467950475254e-09 8.765344352707846 0.641416287593372 RQLS(ph)FSEDSDLSSDDVLEK ddPTM_A549_PD325901_60min_R1 2 RQLSFSEDSDLSSDDVLEK 19 1 Q7RTP6;J3KRP8;J3QQT0 Q7RTP6;J3QQT0 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RQLS(0.936)FS(0.039)EDS(0.024)DLSSDDVLEK;RQLS(0.939)FS(0.059)EDS(0.001)DLSSDDVLEK 186.28 6.9009e-44 10326200.0 3933.1000000000004 4028.1 4664.1 4137.5 4868.0 4601.6 4502.299999999999 4533.6 4071.1 5199.5 5254.0 True False 4332.385416604814 4367.5621236181805 4980.633873511732 4393.063978055726 4526.088473688309 4564.126095255618 4673.637490253096 4443.173791459602 3900.0058246316053 4871.20268264778 4607.7913078501115 0.9402303896063827 0.9478645693387497 1.080915679715447 0.953399076596945 0.9822685471838517 0.9905236132287278 1.0142901833012283 0.9642740945949404 0.8463937631001908 1.0571665158421792 1.0 12.169859661609907 -8.531108386030827 24.978902732149812 0.9262989952959901 0.9879290031739064 0.0 0.06280983650540588 255.6422816789838 775931.6221228987 0.010728193840509687 0.012174017917662955 2.9436868918949883e-09 8.531108386030827 0.06163000787791628 RQLS(ph)MTLR ddPTM_A549_PD325901_60min_R1 1 RQLSMTLR 8 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 RQLS(0.998)MT(0.002)LR 60.434 0.0047287 2238700.0 215.54 317.14 218.27 340.34 294.0 287.59 306.21 206.15 377.45 347.18 365.48 True False 237.42146212783837 343.8665008029266 233.08311476413581 361.36202883177896 273.35045424493865 285.2479623901605 317.86298911454134 202.0381765284535 361.5870891177324 325.25899554989064 320.5282769686062 0.7407192412889436 1.0728117470790457 0.7271842502275233 1.1273951622906961 0.8528122911031394 0.8899307265115297 0.9916847028933865 0.6303287137073461 1.1280973165220853 1.014759130227215 1.0 8.324307826627663 RQLS(ph)PQSK ddPTM_A549_MK2206_60min_R1 4 RQLSPQSK 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RQLS(0.999)PQS(0.001)K;RQLS(0.999)PQS(0.001)K;RQLS(0.995)PQS(0.005)K;RQLS(0.962)PQS(0.038)K 105.83 0.00081702 169768400.0 14547.4 15622.400000000001 15138.9 12624.8 17812.6 15575.5 12331.5 13051.1 18418.0 20293.1 20532.8 True False 17002.645470217336 16417.513431334497 17285.823661933246 15717.8765667488 15192.390136208529 17223.689071819856 14571.973928478543 14901.13339231746 14246.352407502305 15708.874615829955 15433.93908354879 1.1016400530141166 1.0637280180037842 1.1199878118191098 1.018396955026385 0.9843494945760327 1.1159619704718662 0.9441513180527565 0.9654783080102181 0.9230535594563576 1.0178136981617494 1.0 13.913818696224086 -7.107912657485702 0.7484995289922528 0.9624789403670536 1.0918362505024277 0.4318368269865881 0.0495203811290352 0.43838708500730655 0.4660621399554021 0.009225003445931074 0.028058462576275398 7.79986960713699e-08 7.107912657485702 0.1293573101353741 RQLS(ph)PQSK ddPTM_A549_PD325901_60min_R1 4 RQLSPQSK 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RQLS(1)PQSK;RQLS(1)PQSK;RQLS(0.881)PQS(0.119)K;RQLS(0.981)PQS(0.019)K 84.896 0.0012877000000000001 261657000.0 16678.5 17641.5 20295.699999999997 19689.0 19660.0 17927.399999999998 20044.3 20048.5 19534.5 19934.8 22141.0 True False 18371.689041937243 19128.21111784964 21673.088249958615 20905.144813036666 18279.14942331801 17781.405198210527 20807.09680516183 19648.61693975601 18713.53289805363 18676.113325905757 19417.797363363017 0.9461263138217961 0.9850865553855372 1.1161455567999088 1.076597124887086 0.9413606024031655 0.9157271994072823 1.071547736120684 1.01188701128525 0.9637309808043328 0.9618039047592158 1.0 14.245091939051273 -6.761555983241216 24.999999995227178 0.9839978332107914 1.0337927634345623 0.15335698714398005 0.05620813271916805 4.820769656768518 1033876.1065811656 0.008204479271868452 0.0162260475274175 1.731585804257164e-07 6.761555983241216 0.049794930223770906 RQPKT(ph)PLEK ddPTM_A549_MK2206_60min_R1 3 RQPKTPLEK 9 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RQPKT(1)PLEK;RQPKT(1)PLEK;RQPKT(1)PLEK 99.215 0.00028063 53709800.0 6653.2 6098.099999999999 6427.1 5501.7 7707.6 6648.4 6630.2 5994.700000000001 9225.0 10164.9 10418.099999999999 True False 7776.097504877165 6408.467242908957 7338.559423578408 6849.616746980699 6573.8222501959835 7351.929275149257 7834.821517301091 6844.467082998791 7135.552229297906 7868.642030170346 7830.998245067387 0.992989305006574 0.8183461472418975 0.9371167243206627 0.8746798980953873 0.8394615915457168 0.9388240228223921 1.00048822284389 0.8740222981546452 0.9111931845716438 1.0048070225436034 1.0 12.934980509344822 -7.499368825125569 22.904910796793512 0.9530074645224619 0.8898104469827796 0.23054107672976187 0.05711857923914612 316.39473916786886 308252.0880730823 0.008528520837203539 0.013570130980279696 3.166876846624106e-08 7.499368825125569 -0.06319701753968232 RQPKT(ph)PLEK ddPTM_A549_PD325901_60min_R1 2 RQPKTPLEK 9 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RQPKT(1)PLEK;RQPKT(1)PLEK 62.693999999999996 0.0024401999999999996 75909000.0 6309.200000000001 5575.1 7098.6 6046.4 7880.9 6550.6 6417.799999999999 7244.1 6647.0 6106.4 9608.7 True False 6949.705339412441 6044.933242815151 7580.353683349494 6419.872395629276 7327.372771629043 6497.254085444508 6662.032890954915 7099.61074261349 6367.649705565154 5720.840861875255 8426.890814567829 0.8247057535619506 0.7173385031125699 0.8995433606716607 0.7618316810906156 0.8695226902622241 0.771014390528533 0.790568317253862 0.8424946874047747 0.7556345330305217 0.6788791961069982 1.0 13.04078471727582 -10.834777530261032 0.9492238400169661 1.0067269715639113 0.8012845324493015 0.0 0.10724608272794285 0.2623595955068844 0.396515645224684 0.038547857175577224 0.008306746343356071 1.462926374637594e-11 10.834777530261032 -0.2054424391146098 RQPQIKQEPES(ph)EEEEEEKQEK ddPTM_A549_MK2206_60min_R1 1 RQPQIKQEPESEEEEEEKQEK 21 3 P49756 P49756 RBM25 RNA-binding protein 25 1 RQPQIKQEPES(1)EEEEEEKQEK 53.25899999999999 0.0016105 6971500.0 1280.1 1407.9 1467.7 915.11 1034.7 636.77 846.58 463.82 1864.2 1704.0 1883.9 True False 1496.149584559799 1479.5560963728906 1675.8419296394986 1139.3119910808496 882.4970006588023 704.1525787462831 1000.3926276909838 529.5679053891773 1441.9616765156807 1319.065216520602 1416.0756370050635 1.0565463775113653 1.044828438332634 1.1834409729580753 0.8045558876293101 0.6231990563196497 0.49725633316842754 0.7064542327744366 0.37396865785304356 1.0182801248988118 0.9314934753841015 1.0 10.467682610971282 -6.266373580435636 24.76157781738011 0.8668968388987419 1.0899275812177407 0.21977723375644742 0.21853400390869313 595.9260910778984 2990577.8776705647 0.037839324164942796 0.09052625680194483 5.415348613014904e-07 6.266373580435636 0.22303074231899878 RQPQT(ph)PK ddPTM_A549_MK2206_60min_R1 2 RQPQTPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RQPQT(1)PK;RQPQT(1)PK 80.455 0.0097939 57292000.0 3751.5 3870.1000000000004 2838.8999999999996 2422.34 5302.4 4327.2 3980.6 3305.7 5379.0 5721.5 5264.8 True False 4384.661484630956 4067.071559466383 3241.4987082193716 3015.8134087429767 4522.4239840468035 4785.101431837108 4703.823494279016 3774.293098281668 4160.6650884979335 4429.009176245677 3957.4048589119698 1.107963840180975 1.0277117718465036 0.8190970658257528 0.7620684555312671 1.142775163340295 1.209151351058052 1.1886131598808072 0.9537293334499403 1.0513620003089215 1.1191700960976148 1.0 11.950338951202479 -6.786309011974734 24.999525448639844 1.0530541573504306 0.9283806617167791 0.278171974360348 0.11660591563503113 290.8541825695708 292372.6306388528 0.017881863507324645 0.03380364104517 1.6356522975526689e-07 6.786309011974734 -0.12467349563365149 RQPQT(ph)PK ddPTM_A549_PD325901_60min_R1 2 RQPQTPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RQPQT(1)PK;RQPQT(1)PK 58.577 0.020009 64499000.0 12443.6 12751.7 10814.1 10932.599999999999 12547.6 10145.6 9141.900000000001 11231.0 11059.1 13389.3 15326.1 True False 13706.865111505846 13826.330511095046 11548.009856466033 11607.881872263933 11666.299862870052 10062.977597362957 9489.80000713963 11006.988894450938 10594.3244860562 12543.89731296777 13441.086860152556 1.0197735684709557 1.0286616443261432 0.8591574458685526 0.8636118487320142 0.8679580739453416 0.7486729088252274 0.7060292151874332 0.8189061650276405 0.7882044507475161 0.933250223250577 1.0 13.714362180192548 -5.761547969399598 24.999998968378737 0.8630977496045233 1.0242176585366216 0.42057815376146024 0.07923955721213065 2.7476466824147723 633387.0603049331 0.014345916291191602 0.0492087405864743 1.7316177567294886e-06 5.761547969399598 0.16111990893209827 RQPT(ph)WSR ddPTM_A549_PD325901_60min_R1 2 RQPTWSR 7 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 RQPT(1)WSR;RQPT(0.994)WS(0.006)R 73.067 0.011911 13560900.0 2366.4 2637.4 2015.74 2504.6000000000004 2551.5 2496.5 1751.25 2384.1 3014.9 3237.6000000000004 3616.1 True False 2606.6351859483952 2859.662953956106 2152.5402380293176 2659.3034536406935 2372.291442197149 2476.1693317119375 1817.8947770707712 2336.5472552097312 2888.1942375971685 3033.1773834677265 3171.342624346552 0.8219342703425135 0.9017199630220759 0.6787472982276217 0.8385418318491011 0.7480400963254339 0.7807952734915063 0.5732255995030952 0.7367691012859803 0.9107165575312993 0.9564332028276844 1.0 11.63087803587964 -8.913372308740078 3.1704175316605236 0.9635660799277084 0.7588389245467104 0.5312750894319868 0.08264133141755695 0.1387222314499253 2.6572041353495117 0.015829563661112607 0.016464090342836503 1.2207526936805688e-09 8.913372308740078 -0.20472715538099795 RQQDPS(ph)PGSNLGGGDDLK ddPTM_A549_MK2206_60min_R1 2 RQQDPSPGSNLGGGDDLK 18 1 J3KTD8;Q13951-2 J3KTD8 CBFB 1 RQQDPS(0.997)PGS(0.003)NLGGGDDLK;RQQDPS(0.997)PGS(0.003)NLGGGDDLK 153.6 1.6918e-18 43022000.0 3742.8 4942.1 3761.7 3871.7 5350.6 4257.4 4678.700000000001 4365.3 6111.4 5652.6 6391.0 True False 4374.493137325534 5193.631780584178 4295.16562425898 4820.266673807216 4563.533827896963 4707.915242166603 5528.759227926255 4984.094643170572 4727.177657900403 4375.673734098801 4803.93831737319 0.9106056007225175 1.081119580949173 0.8940925841461659 1.0033989521420321 0.9499567909507045 0.9800115928093155 1.1508805614617883 1.037501798294507 0.9840213061863874 0.9108513567450288 1.0 12.23000191160257 -7.544185319281967 24.9953910704578 1.009693996692082 0.971304928528123 0.09618234460497643 0.07033751728858793 505.79024425205955 593355.7526571032 0.009645899139540073 0.014308027613689944 2.8563714312766077e-08 7.544185319281967 -0.03838906816395893 RQQQAATSESS(ph)QSEASVR ddPTM_A549_MK2206_60min_R1 1 RQQQAATSESSQSEASVR 18 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 RQQQAAT(0.001)S(0.002)ES(0.133)S(0.548)QS(0.133)EAS(0.182)VR 48.315 0.008698200000000001 1382700.0 241.37 154.66 202.74 238.76 279.72 0.0 281.3 0.0 174.91 352.68 217.7 True False 282.1073550700717 162.53153339372906 231.4915805785325 297.25621071834354 238.5735585428434 0.0 332.40856879382204 0.0 135.2931642738749 273.0093430531024 163.6390817856586 1.7239607555338639 0.9932317611426087 1.4146472716202967 1.8165355578547082 1.4579253069589888 0.0 2.0313519555751656 0.0 0.8267778259174519 1.6683627167420898 1.0 7.35437353686159 -7.0667144443521215 24.999984243955783 0.8693065080343664 1.4704776738934375 0.1758334340496761 0.5980276650329337 197.11073300402984 73863.05332985082 0.07243193721585243 0.12545585180687158 8.57601546779924e-08 7.0667144443521215 0.6011711658590712 RQRS(ph)DQDSDS(ph)DQPSR ddPTM_A549_PD325901_60min_R1 1 RQRSDQDSDSDQPSR 15 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 RQRS(0.959)DQDS(0.215)DS(0.82)DQPS(0.005)R 50.883 0.018616999999999998 4138800.0 135.85 0.0 167.4 0.0 110.31 206.44 182.39 81.297 109.99 222.72 184.28 True False 149.64139199251574 0.0 178.76077065797554 0.0 102.56220614884086 204.7588210849639 189.33095125763754 79.67546755873727 105.36750280052824 208.65742119036702 161.61472824716753 0.9259143248606635 0.0 1.1060920783444037 0.0 0.6346092788770219 1.2669564420627146 1.1714956508671774 0.49299632788964987 0.6519672058562825 1.2910792441593204 1.0 7.336414869305761 -7.007860753415635 24.90877946463642 0.861916259125506 0.4897950512895089 0.21765338091488995 0.3923293941095879 458.64351079706466 1453335.6103688697 0.05122854163103844 0.09384614245494571 9.820627684932176e-08 7.007860753415635 -0.37212120783599706 RQS(ph)DPSIR ddPTM_A549_MK2206_60min_R1 1 RQSDPSIR 8 1 E9PP00;Q9C0D7;Q9C0D7-2;Q5HYM0-2;Q5HYM0 E9PP00 ZC3H12C;ZC3H12B Probable ribonuclease ZC3H12C;Probable ribonuclease ZC3H12B 1 RQS(0.993)DPS(0.007)IR 42.718 0.031956 6838500.0 512.02 465.05 438.09 487.91 727.75 368.49 402.98 488.67 693.81 799.26 805.84 True False 598.4364583128724 488.7190586108477 500.21774950995996 607.4479719031121 620.6989390445952 407.4833672161343 476.1962497423902 557.9404689891101 536.6631427869027 618.7066108898225 605.7276879474279 0.9879628589221957 0.8068296502458452 0.8258129180209683 1.0028400285968662 1.0247161412546602 0.6727170894184062 0.7861556590817755 0.9211077520325184 0.8859808680785953 1.0214269930211959 1.0 9.242525548583922 -10.357882950538817 0.7576745908653627 0.9992401310780071 0.8753570282691149 0.19857410569953238 0.1002497625048457 0.9520652280524151 1.0051315737537838 0.06551378090534782 0.020371969127071576 4.386489048942441e-11 10.357882950538817 -0.12388310280889225 RQS(ph)DPSIR ddPTM_A549_PD325901_60min_R1 2 RQSDPSIR 8 1 E9PP00;Q9C0D7;Q9C0D7-2;Q5HYM0-2;Q5HYM0 E9PP00 ZC3H12C;ZC3H12B Probable ribonuclease ZC3H12C;Probable ribonuclease ZC3H12B 1 RQS(0.998)DPS(0.002)IR;RQS(0.982)DPS(0.018)IR 72.2 0.0024121 18048200.0 731.8399999999999 947.5999999999999 818.4100000000001 925.74 813.9100000000001 892.41 669.1800000000001 766.49 1032.29 878.67 783.56 True False 806.1358580478671 1027.4575776024892 873.9522240991264 982.9208572919168 756.743769437069 885.1425088375926 694.646011089347 751.2017556502274 988.9064411851745 823.1906262452396 687.1870873960853 1.1730951771845815 1.4951642666857572 1.2717820810788782 1.4303540845280385 1.1012194252726 1.2880662705575672 1.010854283833425 1.0931546436600095 1.4390643528131113 1.19791340865339 1.0 9.424559117513244 -11.070646581320554 1.3807468915735868 0.9997424020958345 1.2758402866282772 0.07331475911232999 0.15889729094967162 0.4407858987118746 1.4975613695918197 0.11245066429958689 0.024731875926550094 8.498717994752033e-12 11.070646581320554 0.27609788453244266 RQS(ph)ENISAPPVLSEDIDK ddPTM_A549_PD325901_60min_R1 2 RQSENISAPPVLSEDIDK 18 1 Q8TDJ6;Q8TDJ6-3;Q8TDJ6-2;H0YLM8 Q8TDJ6 DMXL2 DmX-like protein 2 1 RQS(0.953)ENIS(0.047)APPVLSEDIDK;RQS(0.988)ENIS(0.012)APPVLSEDIDK 89.04899999999999 2.7812e-06 7961300.0 2772.4 2659.6 2350.3 2527.0 3646.8 3144.3999999999996 2478.25 3113.7 3247.0 3414.7 3844.6 True False 3053.8520070669915 2883.733825867011 2509.8054915020325 2683.0870507666036 3390.6613487770155 3118.793048922498 2572.5611599004355 3051.5948108496023 3110.539881746661 3199.0952592436515 3371.7385729273933 0.9057202808032628 0.8552661374820975 0.7443653881276395 0.7957577352852442 1.0056121717150786 0.924980683248736 0.7629776461782148 0.9050508350059188 0.922532935003334 0.9487969455669126 1.0 11.719276966208298 -9.515460697401974 0.34518360472931464 1.0194282286677738 0.8395407178276101 0.2550741258758089 0.07317949592171391 1.239393756130398 0.3509251982538036 0.08515737481393225 0.039498984738176826 3.0516821864866804e-10 9.515460697401974 -0.17988751084016374 RQS(ph)FASLALR ddPTM_A549_MK2206_60min_R1 2 RQSFASLALR 10 1 Q12955-6;Q12955-7;Q12955-5;Q12955-4;Q12955;H0Y3A4;A0A087WZ65;A0A087WTF3;H0YA66 Q12955-6 ANK3 Ankyrin-3 1 RQS(1)FASLALR;RQS(0.999)FAS(0.001)LALR 85.554 8.9592e-05 8891500.0 187.01 230.74 325.36 284.35 190.12 307.72 271.67 153.99 418.43 282.89 408.88 True False 218.57271604447143 242.48368042977538 371.50094040165374 354.0157627649568 162.15359985044105 340.2827261519956 321.0289224465609 175.8185540745966 323.6562730954063 218.98495252436237 307.3438114860822 0.7111668036770258 0.7889655537793577 1.2087470985843385 1.1518558354996782 0.5275967622916788 1.1071728580010956 1.0445270425140754 0.5720582211318037 1.0530756143435893 0.7125080913961365 1.0 8.26370962578623 RQS(ph)FASLALR ddPTM_A549_PD325901_60min_R1 3 RQSFASLALR 10 1 Q12955-6;Q12955-7;Q12955-5;Q12955-4;Q12955;H0Y3A4;A0A087WZ65;A0A087WTF3;H0YA66 Q12955-6 ANK3 Ankyrin-3 1 RQS(1)FASLALR;RQS(1)FASLALR;RQS(0.99)FAS(0.01)LALR 151.52 1.0249999999999999e-08 36864300.0 3360.75 3884.4900000000002 3155.25 4323.34 4404.63 3966.62 4240.77 3896.9 5103.27 4282.2 4856.68 True False 3701.9308659466146 4211.849604918841 3369.3842390596024 4590.382892782462 4095.2639839485873 3934.3171618486717 4402.154822988388 3819.1732724410913 4888.797308999469 4011.821161195174 4259.339149031113 0.8691326838316469 0.98885049007589 0.7910579836841704 1.077721855942524 0.9614787272528301 0.9236919212558184 1.0335300075810496 0.89665864558117 1.1477830569353795 0.9418881711046083 1.0 12.056413893429191 -8.753416271166548 24.98361554559231 1.0697864451857266 0.9467565967646541 0.11782846055776885 0.08908172828065279 159.18264147148375 495687.79479051445 0.014350613651511407 0.016131826336193467 1.7643458848083507e-09 8.753416271166548 -0.12302984842107256 RQS(ph)FAVLR ddPTM_A549_MK2206_60min_R1 1 RQSFAVLR 8 1 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2;A0A087WWG1 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 RQS(1)FAVLR 113.93 0.00055929 6824100.0 293.6 373.04 351.14 347.67 458.52 291.89 192.55 316.49 456.95 396.43 320.43 True False 343.1525021691717 392.02614261733305 400.9369320526089 432.84916560749963 391.07231539777126 322.7776060590991 227.53384259242944 361.3534267099752 353.45155459920625 306.87618766740746 240.8583875818951 1.424706465962267 1.6276208877469085 1.6646168567257593 1.7971106173760507 1.6236607714763573 1.340113621533526 0.944678924727356 1.500273377804251 1.4674662491420523 1.274093838907999 1.0 7.912041354563666 -7.333599406263721 3.999890574791326 1.2302752400788686 1.640376658438546 0.5305179852174228 0.17592780707328143 0.16659926539837683 5.185710715748988 0.03290786773917184 0.054171634464320835 4.638746009316947e-08 7.333599406263721 0.4101014183596774 RQS(ph)FAVLR ddPTM_A549_PD325901_60min_R1 2 RQSFAVLR 8 1 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2;A0A087WWG1 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 RQS(1)FAVLR;RQS(1)FAVLR 125.74 0.00045621 30845000.0 2494.38 2230.8 1773.78 1865.4099999999999 2677.7 2463.2 1843.82 2157.1 2308.5 2184.67 2504.4 True False 2747.607621334498 2418.797344993282 1894.159377405639 1980.632139046509 2489.6275895635117 2443.1405158713587 1913.9875790770188 2114.0749482877873 2211.4817730249956 2046.729563361886 2196.3746766996214 1.2509740029707435 1.1012680899362233 0.8624026663118763 0.901773344984428 1.1335167974639675 1.1123514315610938 0.8714303617600749 0.9625292855153923 1.0068781963686062 0.9318672196846672 1.0 11.100908467469903 RQS(ph)GLYDSQNPPTVNNCAQDR ddPTM_A549_MK2206_60min_R1 2 RQSGLYDSQNPPTVNNCAQDR 21 1 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 1 RQS(0.973)GLY(0.003)DS(0.024)QNPPTVNNCAQDR;RQS(0.998)GLY(0.002)DS(0.001)QNPPTVNNCAQDR 107.75 2.5149000000000003e-10 21011200.0 3077.9 3660.6 2701.2 3172.3 4497.7 4135.0 2665.0 3441.9 4773.8 4767.8 4598.1 True False 3597.374272569803 3846.9089043132344 3084.2707776399925 3949.5136424099605 3836.0942880671605 4572.562955409146 3149.1960036812493 3929.7998653766726 3692.541922192125 3690.750668619092 3456.2648688958984 1.0408271382624046 1.1130249127990375 0.8923710695312714 1.1427115085863284 1.109895923367875 1.3229781654060118 0.911155864245803 1.1370077278342514 1.0683619636395822 1.0678437008209096 1.0 11.754998066515395 -10.140326983397205 0.7532736681948626 1.0027031741217194 1.0842039035687665 0.015135605566887644 0.11181442901984429 1.3447788663080291 1.4903666237424558 0.0567089626465436 0.021766273608505193 7.238907323786642e-11 10.140326983397205 0.08150072944704712 RQS(ph)GLYDSQNPPTVNNCAQDR ddPTM_A549_PD325901_60min_R1 2 RQSGLYDSQNPPTVNNCAQDR 21 1 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 1 RQS(0.989)GLY(0.002)DS(0.009)QNPPTVNNCAQDR;RQS(0.995)GLY(0.001)DS(0.004)QNPPTVNNCAQDR 90.78 1.0807999999999999e-06 28835000.0 7060.6 7380.400000000001 7825.0 7707.400000000001 8545.2 7698.4 8332.6 7916.200000000001 6910.1 8190.5 9110.7 True False 7777.386914260995 8002.372209516051 8356.051555547545 8183.468593224583 7945.014631339631 7635.706782796382 8649.70165277368 7758.3051808612345 6619.692527520044 7673.350432200526 7990.1416574857285 0.9733728446446991 1.0015307052809088 1.0457951703170376 1.0241956831338193 0.994352161941482 0.9556409773589825 1.0825467211423003 0.9709846850578309 0.8284824989702465 0.9603522391885992 1.0 12.964005365630173 -8.527769694886304 24.994199577203688 0.9179913037460639 1.0109767494488238 0.3302539343840718 0.050346734770456134 128.13100034049356 654783.7360474827 0.011249954365768058 0.012778039751869204 2.966404048027628e-09 8.527769694886304 0.0929854457027599 RQS(ph)HLLLQSSIPDQQLLK ddPTM_A549_MK2206_60min_R1 2 RQSHLLLQSSIPDQQLLK 18 1 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-2 A0MZ66 KIAA1598 Shootin-1 1 RQS(0.983)HLLLQS(0.009)S(0.009)IPDQQLLK;RQS(0.961)HLLLQS(0.019)S(0.019)IPDQQLLK 44.105 0.01187 4391800.0 959.5 1131.91 1633.55 999.24 1643.15 1101.27 1137.37 930.36 1375.07 1506.3 1247.48 True False 1121.4401424772498 1189.519384221492 1865.2119535072584 1244.0538448575876 1401.4448116676429 1217.8056604361373 1344.015406644256 1062.2413791080055 1063.6188405355742 1166.0257838292166 937.6962873035066 1.1959524183487253 1.268555075164201 1.9891429440026571 1.326712989805111 1.4945615447595706 1.2987207872371227 1.4333163358353311 1.1328202889260104 1.1342892735495176 1.243500480504522 1.0 9.872976910220547 -8.34838506333401 0.835669908353788 1.0407151567553228 1.4687566094893583 0.30097455874419576 0.20900007937298493 0.36742432091899435 0.5108114593822667 0.04313118743807034 0.05541013141531118 4.483476901647672e-09 8.34838506333401 0.4280414527340355 RQS(ph)HLLLQSSIPDQQLLK ddPTM_A549_PD325901_60min_R1 1 RQSHLLLQSSIPDQQLLK 18 1 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-2 A0MZ66 KIAA1598 Shootin-1 1 RQS(0.999)HLLLQS(0.001)SIPDQQLLK 109.84 1.1648e-09 5529500.0 3615.5 3123.4 3210.7 3493.2 3629.2 3420.4 3164.9 4720.1 3360.3 3607.3 3678.8 True False 3982.5428984095743 3386.619879573255 3428.5974095075385 3708.9670303671915 3374.297512060311 3392.545396430005 3285.3420013997325 4625.953902653181 3219.0782767580217 3379.5344623743304 3226.3309218346008 1.23438760464936 1.0496814993942123 1.0626924182835908 1.1495928719730175 1.0458621864311337 1.051518111012893 1.0182904608965455 1.4338125922999576 0.9977520455116691 1.0474853771207737 1.0 11.655678706666068 RQS(ph)IPEEFK ddPTM_A549_PD325901_60min_R1 2 RQSIPEEFK 9 1 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H3G9 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 RQS(1)IPEEFK;RQS(1)IPEEFK 52.693000000000005 0.0097944 16055900.0 2057.38 2191.5299999999997 2421.6 1786.4 2534.46 2402.59 2107.83 2045.79 2449.21 2415.81 2523.82 True False 2266.243703036893 2376.217924275205 2585.9443382637596 1896.7418707912377 2356.4482730123377 2383.0241036161756 2188.0446240988326 2004.985113558792 2346.278221057202 2263.275344315285 2213.4061398131457 1.023871607778321 1.0735571215483317 1.1683099146377462 0.856933500216711 1.0646253440009286 1.0766321014259719 0.988541860773706 0.9058369711254399 1.060030592151187 1.0225305259640913 1.0 11.112052481455825 RQS(ph)IPEEFR ddPTM_A549_MK2206_60min_R1 1 RQSIPEEFR 9 1 A0A1B0GUL8;A0A1B0GWJ3;A0A087WX15;Q9C0E4-3;Q9C0E4-2;Q9C0E4 A0A1B0GUL8 GRIP2 Glutamate receptor-interacting protein 2 1 RQS(1)IPEEFR 53.251999999999995 0.0093047 1555600.0 194.58 232.09 159.6 126.96 282.05 400.87 172.38 206.04 446.5 164.73 287.1 True False 227.42034697574078 243.9023896634592 182.23367988721404 158.06520569945096 240.56081862937586 443.28979732403 203.69921467713834 235.24680097103624 345.36846291398524 127.51737859004632 215.8051464430987 1.0538226299237246 1.1301972806648004 0.844436209658529 0.732444097393794 1.1147130760980462 2.054120601989036 0.9439034148837951 1.090088929056489 1.6003717640952946 0.5908912771163629 1.0 7.753585459880565 -7.001933851087821 24.978464980207818 1.3054771260768363 0.9440306573206891 0.07712959700518629 0.3729375954296234 95.72633871753595 1236478.643214214 0.04851249052749857 0.09069985093199755 9.955570425806598e-08 7.001933851087821 -0.36144646875614717 RQS(ph)KVEALYELLR ddPTM_A549_PD325901_60min_R1 1 RQSKVEALYELLR 13 2 Q03169 Q03169 TNFAIP2 Tumor necrosis factor alpha-induced protein 2 1 RQS(1)KVEALYELLR 61.692 0.0015284 1045600.0 209.75 310.91 287.74 245.75 218.35 259.21 169.43 243.07 362.71 335.69 298.79 True False 231.04366559021105 337.1114768387397 307.26776672118217 260.92941936125544 203.0138492666068 257.09907970080144 175.87775136565347 238.22177816527386 347.46656005800133 314.49447611078625 262.04072418586503 0.881709002705748 1.286485060236771 1.1725954722336887 0.9957590377294891 0.7747415975030256 0.9811416927639137 0.6711848011872524 0.9091021210745226 1.326002136261629 1.2001740458010484 1.0 8.033647230603622 -8.736293089975854 24.93759911222974 1.1539455017580456 0.9633354451282423 0.2305779232865034 0.17465484125887154 304.3252699601835 301799.5800674867 0.034344337173151794 0.038935299550441844 1.8352993467412887e-09 8.736293089975854 -0.19061005662980324 RQS(ph)LELQK ddPTM_A549_MK2206_60min_R1 2 RQSLELQK 8 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 RQS(1)LELQK;RQS(1)LELQK 137.01 0.00045455 59348000.0 5271.3 6504.5 6333.5 5597.0 7864.599999999999 6909.6 6312.8 5853.0 9105.8 9239.7 8477.0 True False 6160.966569088409 6835.55126703421 7231.685536125757 6968.2652512588775 6707.727758172619 7640.769285778722 7459.754045793245 6682.6806740607435 7043.3508389746185 7152.445352749653 6371.926946702011 0.9668922165338397 1.0727604575837395 1.1349291347209718 1.0935883775104358 1.0527000410204659 1.1991300825778362 1.1707218410051408 1.0487691917936335 1.1053721892747255 1.122493307374094 1.0 12.637514011312678 -10.662295416871943 0.8069078652214453 0.9964681295087532 1.097895205259796 0.0 0.06961155280476329 0.7711081244269855 0.8436247743477471 0.049030818695234055 0.011354073021843967 2.176228948900792e-11 10.662295416871943 0.1014270757510427 RQS(ph)LELQK ddPTM_A549_PD325901_60min_R1 2 RQSLELQK 8 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 RQS(1)LELQK;RQS(1)LELQK 142.1 0.00042831 78048000.0 11664.4 11646.1 11906.9 10964.3 12946.2 12371.599999999999 12358.900000000001 13039.099999999999 13219.4 11540.2 12112.3 True False 12848.561301122569 12627.557718991511 12714.973836006264 11641.539909268009 12036.903573965405 12270.8497913909 12829.22470254957 12779.024921523931 12663.834589701823 10811.549802537149 10622.563886195825 1.2095536857932632 1.1887485784294698 1.1969778644993188 1.0959256196516134 1.1331448511792463 1.1551683682822604 1.2077333532652446 1.203007584461832 1.1921636551566104 1.0177909889143537 1.0 13.374844399879466 -10.683993161896707 0.8596961203168614 0.9955913587990647 1.1748397750125383 0.776461725604095 0.034380208553241726 0.24916624499357454 0.3151603813114202 0.028967274672228618 0.006945681196188624 2.0701739440746784e-11 10.683993161896707 0.17924841621347365 RQS(ph)LPAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RQSLPASPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 RQS(1)LPAS(1)PR 54.343 0.0049518999999999995 2549600.0 202.36 219.21 224.79 234.57 340.91 272.33 162.2 257.55 363.32 283.71 358.37 True False 236.51342077300288 230.3668526783872 256.66860214189757 292.03966053024755 290.7625906007464 301.14777984197656 191.6696404491927 294.0585012137952 281.02860010281995 219.6197139548475 269.37683849116434 0.8780020661678403 0.8551843357013166 0.9528235745120173 1.084130551706013 1.0793897212149646 1.1179423647881825 0.7115297719090261 1.091625036736187 1.0432545042733428 0.8152880373271257 1.0 8.073482000372875 -5.948403420378817 4.102872906022514 1.0185747607660436 0.8686746414643484 0.11191523513040058 0.12070728644933636 0.21597139313571748 7.61875293779754 0.013695195361958696 0.04539082994368254 1.126150877631522e-06 5.948403420378817 -0.14990011930169522 RQS(ph)LPAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RQSLPASPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 RQS(1)LPAS(1)PR;RQS(1)LPAS(1)PR 51.013000000000005 0.0066806 8223300.0 497.09 429.37 532.98 505.6 541.3100000000001 381.15 494.25 509.7 410.6 587.07 612.41 True False 547.5542108616828 465.5545167741459 569.1512278691031 536.8297636990874 503.2902530181222 378.04604076987977 513.0589542139775 499.53363364808524 393.3439098999624 550.002300010007 537.0874523868453 1.0194879966536599 0.8668132437374897 1.059699356854763 0.9995202109328515 0.9370731913052027 0.7038817218496225 0.9552614791760935 0.9300787635758966 0.732364735299477 1.0240460795830688 1.0 9.069013206947321 -7.007639916014768 24.157139212307406 0.8695305274809646 0.9812293080381014 0.13786280556313601 0.10410400138288851 322.6939711159427 1020355.3086273675 0.016696583108326335 0.030601184195977967 9.825622713607519e-08 7.007639916014768 0.11169878055713678 RQS(ph)LPASPR ddPTM_A549_PD325901_60min_R1 2 RQSLPASPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RQS(1)LPASPR;RQS(0.999)LPAS(0.001)PR 62.693999999999996 0.0029545 8687300.0 2173.04 2051.0699999999997 2463.7 2010.8 2511.5 1733.18 2343.4700000000003 2333.36 2416.29 2497.8 2396.0 True False 2393.6454210925026 2223.9208671307915 2630.901497431626 2135.002549141862 2335.100904204638 1719.0655567139975 2432.652033245988 2286.819304314492 2314.74173417482 2340.088481722785 2101.307189495406 1.1391220822250634 1.0583511436349433 1.2520308837202396 1.0160354277636805 1.1112610835188612 0.8180934064794222 1.1576851044944785 1.0882841479563174 1.1015722716537542 1.113634642959899 1.0 11.03707136926506 -14.999886006563617 0.01151000482122124 5.878125879811428e-05 1.965189107097345 0.016003079315126345 0.10415460377590986 13960.954853711106 12.510367451471861 1263.6921406435772 901.0827170344965 1.0002625140380951e-15 14.999886006563617 1.9651303258385469 RQS(ph)LTSPDSQSARPANR ddPTM_A549_MK2206_60min_R1 1 RQSLTSPDSQSARPANR 17 2 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 RQS(0.995)LT(0.002)S(0.002)PDSQSARPANR 47.047 0.0050838 2604000.0 535.69 578.54 534.74 419.66 779.72 415.23 318.92 237.77 503.39 562.66 725.44 True False 626.1013756369335 607.9852148558646 610.5741728251184 522.4767188392532 665.024220888838 459.16936299263335 376.86363583265444 271.47462564008566 389.3729687486475 435.5547152156584 545.2932268745436 1.1481921006529971 1.114969313557501 1.1197171406744688 0.958157360277391 1.2195717608681047 0.8420595385430583 0.6911210652527691 0.49785072005404574 0.7140616269532926 0.798753209740247 1.0 9.090888425526806 -7.3359295071524695 6.994309487685509 0.8146763954093067 1.1037875268957051 0.6205426436108745 0.13410400064460315 0.202804425915435 16.41874925428898 0.025527546780167797 0.04094076686099397 4.6139245975962984e-08 7.3359295071524695 0.28911113148639844 RQS(ph)LYENQV ddPTM_A549_MK2206_60min_R1 1 RQSLYENQV 9 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RQS(1)LYENQV 45.879 0.057587 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RQS(ph)MKEK ddPTM_A549_MK2206_60min_R1 2 RQSMKEK 7 2 Q9H307 Q9H307 PNN Pinin 1 RQS(1)MKEK;RQS(1)MKEK 68.735 0.0046313000000000005 11304200.0 3506.7 3761.4 2363.5 1860.47 2257.2 1903.81 1800.21 2237.2400000000002 2132.34 6272.8 6032.0 True False 4098.545229416333 3952.839193761624 2698.6798396831487 2316.285233519673 1925.1688700947582 2105.2699105532015 2127.284854704323 2554.3756212601497 1649.3683946472734 4855.7701233511925 4534.087925269142 0.9039403948420442 0.8718047066824326 0.5951979503183005 0.510860237317118 0.42459892746356054 0.46432048633645173 0.4691759158106861 0.5633714350849345 0.36377071239732683 1.0709474988981285 1.0 12.146596652829409 -10.95546488843442 1.2193943230683661 0.9999377674093732 0.5513634988733104 0.5232412734256646 0.16686794112957767 0.34755407188800097 0.9189356136491755 0.12965015328940388 0.030179407767263768 1.1079881396776257e-11 10.95546488843442 -0.44857426853606286 RQS(ph)MKEK ddPTM_A549_PD325901_60min_R1 2 RQSMKEK 7 2 Q9H307 Q9H307 PNN Pinin 1 RQS(1)MKEK;RQS(1)MKEK 58.676 0.012412000000000001 17368200.0 4180.4 4169.8 3089.0 3091.6 3873.6 2914.3999999999996 2593.5 3214.2 3367.7 4635.3 5274.1 True False 4604.791130552175 4521.203679914373 3298.638115665987 3282.5611104669674 3601.5316991945397 2890.6660926662385 2692.1970617176544 3150.0902595088774 3226.1672804922164 4342.626366934752 4625.419135274507 0.9955402950264509 0.9774689704192723 0.713154423241305 0.7096786289989168 0.778638993324612 0.6249522493261974 0.5820439149365605 0.6810388782900919 0.6974864733638352 0.9388611582930695 1.0 12.175368386936277 -4.338526227459962 19.928635736047273 0.8060188476538275 0.7716269322601756 0.0 0.15063300935291946 0.0 0.0 0.02300674018236721 0.0 4.5864194713511516e-05 4.338526227459962 -0.03439191539365183 RQS(ph)MLF ddPTM_A549_MK2206_60min_R1 2 RQSMLF 6 1 Q00537 Q00537 CDK17 Cyclin-dependent kinase 17 1 RQS(1)MLF;RQS(1)MLF 68.422 0.042947000000000006 16566100.0 883.5899999999999 1370.56 1032.18 1139.61 1571.6100000000001 937.02 1240.43 1153.22 2026.97 1496.1100000000001 1456.63 True False 1032.7183902985644 1440.3156498649248 1178.5586447743397 1418.8145011590375 1340.4282508991773 1036.174834456463 1465.8000746140074 1316.6924665881309 1567.8645314059597 1158.1377119064784 1094.9085700571613 0.9432005726694146 1.3154665962562802 1.0763991414486884 1.2958292043370947 1.2242376099304788 0.946357406264861 1.3387419869564845 1.202559284488376 1.4319593199677916 1.0577483303889166 1.0 10.096594687792344 RQS(ph)MLF ddPTM_A549_PD325901_60min_R1 2 RQSMLF 6 1 Q00537 Q00537 CDK17 Cyclin-dependent kinase 17 1 RQS(1)MLF;RQS(1)MLF 67.98100000000001 0.043407999999999995 22240700.0 1378.11 1245.83 1314.2 1586.5 1434.05 1406.61 1362.0700000000002 1291.3200000000002 1711.4199999999998 1921.87 1463.93 True False 1518.014712689039 1350.8204663407644 1403.3895149265913 1684.4945017970765 1333.3272752039275 1395.1550345200587 1413.9043192033025 1265.5636095790567 1639.4949690233652 1800.522800211614 1283.8758906168655 1.1823687350026306 1.0521425600505154 1.093088144409584 1.312038425293371 1.0385172624149068 1.0866743777311114 1.1012780359353598 0.9857367202144358 1.2769886723518384 1.4024118790380233 1.0 10.32629003179086 RQS(ph)NLQEVLER ddPTM_A549_MK2206_60min_R1 2 RQSNLQEVLER 11 1 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 RQS(1)NLQEVLER;RQS(1)NLQEVLER 118.2 6.716000000000001e-06 22846000.0 1131.54 1176.85 1080.5 1014.46 1443.24 1023.13 979.21 932.25 1965.8 1706.8600000000001 1604.58 True False 1322.516288503082 1236.7466382672312 1233.731147356735 1263.0027455408392 1230.9413078484667 1131.3969375012712 1157.1197819004565 1064.3992923958865 1520.5494387375413 1321.2791405342468 1206.118501844887 1.0965060949485081 1.0253939694777048 1.0228938080873573 1.0471630636698979 1.0205807356123056 0.9380479080377913 0.9593748708195076 0.8824997633049937 1.2606965537894481 1.0954803682334773 1.0 10.236155944491395 -8.755644676295844 24.999998271478344 1.123106704830204 0.9996945145162439 0.31673251766526167 0.07820180668428962 157.46688648523767 679356.7295581998 0.01799570849149692 0.02014100790737836 1.7553160492635579e-09 8.755644676295844 -0.12341219031396 RQS(ph)NLQEVLER ddPTM_A549_PD325901_60min_R1 2 RQSNLQEVLER 11 1 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 RQS(1)NLQEVLER;RQS(1)NLQEVLER 141.57 1.3066e-11 29415000.0 1687.5100000000002 1992.6499999999999 1834.1 1822.68 2052.42 2000.3200000000002 2252.19 2328.3 2470.3 2675.0 2209.3 True False 1858.8247729207962 2160.577608705784 1958.5730553392646 1935.26280399338 1908.2650996646169 1984.0300571239834 2337.898322895658 2281.8602299839845 2366.481881699652 2506.100043481644 1937.5701059065955 0.9593587180428994 1.1150964819901794 1.0108398397398073 0.9988091775847585 0.9848753827525293 1.023978462031261 1.20661353917914 1.177691699014057 1.2213658099314901 1.2934241893193494 1.0 10.920032796140054 -7.635007768120469 10.393133470339631 1.120771451854532 1.0170513942488748 0.4144108667983686 0.08499925619774318 0.38547387812017425 33.88345952453669 0.014260427625673842 0.0211540141077793 2.3173531996609796e-08 7.635007768120469 -0.10372005760565717 RQS(ph)PEPSPVTLGR ddPTM_A549_MK2206_60min_R1 3 RQSPEPSPVTLGR 13 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 RQS(1)PEPSPVTLGR;RQS(0.976)PEPS(0.013)PVT(0.011)LGR;RQS(1)PEPSPVTLGR 97.93299999999999 6.7687e-05 260116000.0 7654.0 7983.599999999999 7988.5 7586.51 10886.2 8194.699999999999 6791.139999999999 7264.780000000001 11810.1 12029.400000000001 11398.8 True False 8945.80807766636 8389.931139287311 9121.389422174248 9445.205290571372 9284.85440086194 9061.85771479838 8025.002232059991 8294.584812455667 9135.131206854332 9311.950185218862 8568.163369124326 1.0440753394015443 0.9791983156531211 1.0645676359350817 1.1023605507578784 1.0836458177630266 1.0576196232967614 0.936607051749079 0.968070338428127 1.0661714551070647 1.0868081972823718 1.0 13.064770272870998 RQS(ph)PEPSPVTLGR ddPTM_A549_PD325901_60min_R1 3 RQSPEPSPVTLGR 13 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 RQS(0.991)PEPS(0.008)PVT(0.001)LGR;RQS(1)PEPSPVTLGR;RQS(0.981)PEPS(0.012)PVT(0.008)LGR 181.51 1.9395999999999998e-25 227345000.0 21473.199999999997 21053.1 22188.6 21516.5 24817.1 21399.2 22271.7 24083.0 25917.1 24681.1 24348.3 True False 23653.143456265643 22827.318622860865 23694.451826891014 22845.525337483006 23074.032510347166 21224.932010082142 23119.261731041883 23602.645672251998 24827.894416143008 23122.731133897123 21353.61345659056 1.1076880971152616 1.0690143225298228 1.10962258800175 1.0698669517421644 1.080568052674271 0.9939737858995148 1.0826861588574075 1.1053232615750708 1.162702250212371 1.0828486326636462 1.0 14.382192602781505 -11.132932095607812 1.5182664110003887 1.0003163305775897 1.094939618236573 0.003112399030199331 0.04579612099623397 0.35321976177865644 1.4661926240006766 0.03308445246966916 0.007217142097677632 7.363222166270504e-12 11.132932095607812 0.0946232876589832 RQS(ph)PLPPQK ddPTM_A549_MK2206_60min_R1 2 RQSPLPPQK 9 1 Q01105;B2REB7 Q01105 SET Protein SET 1 RQS(1)PLPPQK;RQS(1)PLPPQK 92.19 0.00042327 155583000.0 39651.0 42195.0 41016.0 36403.0 55474.0 40537.0 38159.0 40423.0 59021.0 60770.0 65909.0 True False 46343.119426123405 44342.54527058324 46832.68555296977 45321.73663419274 47313.848085963415 44826.59843371719 45091.9963619035 46153.08404024556 45652.837737169815 47042.014793402035 49541.9763041386 0.9354313833106417 0.8950499874765591 0.9453132282302088 0.9148148704436461 0.9550254474206541 0.9048205537568047 0.9101775852679627 0.9315955374269164 0.9214981141831458 0.9495385187020138 1.0 15.596363800562266 -10.650557630131916 0.6886550074199891 1.006336558838603 0.9225980424689963 0.36783418113005895 0.022264126316322134 0.3246525224281252 0.2422900999835334 0.015761308369230852 0.0031803248730914546 2.2358484857819655e-11 10.650557630131916 -0.08373851636960672 RQS(ph)PLPPQK ddPTM_A549_PD325901_60min_R1 6 RQSPLPPQK 9 1 Q01105;B2REB7 Q01105 SET Protein SET 1 RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK 101.38 0.00036915 288609400.0 65893.6 66870.0 70791.7 70865.70000000001 82785.0 76905.3 73199.4 76587.4 80011.70000000001 78858.5 83154.40000000001 True False 72583.06976369536 72505.36958028533 75596.05046707427 75242.91334131817 76970.46719274575 76279.0087346709 75985.04322324855 75059.804225347 76649.08649718181 73879.3608519242 72926.93595917226 0.9952847848198446 0.9942193323585823 1.0365998443894078 1.031757502926525 1.0554463337913613 1.045964810277718 1.0419338509681573 1.0292466458123075 1.0510394477575935 1.013059987784008 1.0 16.15416415976957 -5.7562256564761105 24.706603180056096 1.030765103321384 0.9947520374474166 0.474976331204468 0.015590934797781387 99.59359490922685 471931.85927438695 0.002888176980254417 0.010535433236600202 1.7529694341055071e-06 5.7562256564761105 -0.036013065873967465 RQS(ph)PLPPQKK ddPTM_A549_MK2206_60min_R1 4 RQSPLPPQKK 10 2 Q01105;B2REB7 Q01105 SET Protein SET 1 RQS(1)PLPPQKK;RQS(1)PLPPQKK;RQS(1)PLPPQKK;RQS(1)PLPPQKK 81.565 0.00022782 103733700.0 33374.9 34896.7 31529.3 28789.0 43839.2 33035.4 29165.6 32212.2 47191.600000000006 48025.6 44850.0 True False 39007.76718203644 36672.79297414294 36000.628842530925 35842.30629238734 37390.51175343708 36531.184100876264 34464.611994358675 36778.37799572517 36502.777949499745 37176.58360477222 33712.507202971006 1.1570710818742895 1.0878097186112297 1.067871595125926 1.0631753395436765 1.1090991105562726 1.0836092338352352 1.0223093698389003 1.0909416429426517 1.0827666340485895 1.1027534493636217 1.0 15.040996304254731 -14.999999999999075 0.17428722104392944 0.6575347024261008 1.1041203015643544 0.0 0.04224897167720549 29.892128993165585 0.3256923712111968 3.4999036117929254 0.03656046619458518 1.000000000002131e-15 14.999999999999075 0.4465855991382536 RQS(ph)PLPPQKK ddPTM_A549_PD325901_60min_R1 2 RQSPLPPQKK 10 2 Q01105;B2REB7 Q01105 SET Protein SET 1 RQS(1)PLPPQKK;RQS(1)PLPPQKK 91.20200000000001 0.00013268 148084000.0 39455.0 37224.0 39376.0 39001.0 42540.0 42022.0 41836.0 42770.0 45330.0 42813.0 45883.0 True False 43460.44255476412 40360.99711763934 42048.29214712335 41410.003192302436 39552.13715503297 41679.78676434967 43428.09187353762 41916.918797584076 43424.937739321256 40109.77987348772 40239.6818763012 1.080039417020336 1.0030148161138814 1.0449459385981705 1.0290837616360602 0.9829137634988822 1.035788177761331 1.079235467294144 1.0416811675211248 1.0791570836174027 0.9967717934944714 1.0 15.296331279193465 -7.51532274429405 24.9539561550651 1.0422670040768856 1.025786978088616 0.02081989755523128 0.03338773296105209 1072.6357027777583 3542391.9723139247 0.005586541368498787 0.008479807383000611 3.0526517035539525e-08 7.51532274429405 -0.016480025988269587 RQS(ph)PS(ph)PSTR ddPTM_A549_PD325901_60min_R1 1 RQSPSPSTR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(0.998)PS(0.94)PS(0.055)T(0.006)R 60.434 0.013258 4978900.0 216.92 200.17 202.68 183.07 341.4 201.77 233.04 145.84 152.49 222.39 218.8 True False 238.94155871193604 217.03902839667614 216.43508361385 194.37781811786377 317.42124176606166 200.12685201663024 241.90846472438116 142.9311067907333 146.08137559825934 208.34825744668518 191.88898708747692 1.2452072541453834 1.1310655795881293 1.1279182140618793 1.0129701608631259 1.65419207524066 1.0429303685124873 1.2606688293898896 0.7448635221862677 0.7612806644899577 1.0857749608720637 1.0 7.584128104381469 -8.253375160672153 24.72843895067817 0.8734410624701683 1.2074590030151695 0.39908621496789287 0.18367460188563095 366.6419240566237 1124285.6217043835 0.028501839037541502 0.036455383934281826 5.579879745053857e-09 8.253375160672153 0.3340179405450012 RQS(ph)PS(ph)PSTRPIR ddPTM_A549_MK2206_60min_R1 2 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(0.936)PS(0.63)PS(0.281)T(0.152)RPIR;RQS(0.999)PS(0.79)PS(0.182)T(0.029)RPIR 66.059 0.004580399999999999 156890000.0 2868.26 3222.19 2499.0299999999997 1946.3 3416.39 3294.91 2599.15 2683.21 3959.41 4375.1 4228.4 True False 3352.3521657757133 3386.185707913745 2853.4300316324857 2423.143587372726 2913.843556664466 3643.5751892157523 3071.381911057454 3063.563234485993 3062.6099568785285 3386.7618713610836 3178.371582096823 1.0547389061300732 1.065383835857173 0.897764769766168 0.7623852418709769 0.9167724670952905 1.1463653934421434 0.9663382117931012 0.9638782487681665 0.9635783223489794 1.0655651121593472 1.0 11.63407208408443 RQS(ph)PS(ph)PSTRPIR ddPTM_A549_PD325901_60min_R1 5 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(0.988)PS(0.531)PS(0.393)T(0.087)RPIR;RQS(0.997)PS(0.833)PS(0.14)T(0.031)RPIR;RQS(0.992)PS(0.589)PS(0.342)T(0.077)RPIR;RQS(1)PS(0.59)PS(0.35)T(0.06)RPIR;RQS(0.995)PS(0.784)PS(0.197)T(0.024)RPIR 66.67399999999999 0.0016412 543092000.0 8100.799999999999 8173.169999999999 9155.3 7941.4400000000005 9378.07 8362.75 7866.93 8239.31 9301.410000000002 9268.099999999999 10186.0 True False 8923.187252506232 8861.951719642604 9776.6337132913 8431.964712481173 8719.386715785142 8294.646536660923 8166.310326099273 8074.97049843635 8910.50408422458 8682.910584296153 8933.186574374044 0.9988806545363671 0.9920258180954391 1.0944172756154886 0.94389215340798 0.9760667868280941 0.9285204632863202 0.914154233554838 0.903929458005546 0.9974608735683936 0.9719835707007577 1.0 13.124959178373809 -6.2966236115428496 24.998945482151765 0.9763688579946292 1.0247998117601207 0.2865249683075758 0.04272267145138215 796.1581580390077 565681.5819094774 0.006884711353285717 0.015999122129157436 5.050988601620717e-07 6.2966236115428496 0.04843095376549145 RQS(ph)PSPS(ph)TRPIR ddPTM_A549_MK2206_60min_R1 1 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(0.986)PS(0.142)PS(0.539)T(0.333)RPIR 47.037 0.030014 115060000.0 1234.8 1467.4 1208.2 1076.5 1601.5 1122.7 1115.8 1222.5 1834.0 2006.3 1894.3 True False 1443.2040520384649 1542.084392227842 1379.540927567244 1340.242548325921 1365.9214714942214 1241.5033688120545 1318.526416850859 1395.793118749233 1418.6019282961897 1553.0754365641344 1423.8930299796652 1.0135621297753494 1.083005787485219 0.968851520810482 0.9412522711379949 0.9592865775273359 0.8719077505631055 0.9260010331462112 0.9802654338220662 0.9962840595662225 1.090724797344021 1.0 10.475625052515165 -5.7755405246468685 24.803824787515065 0.9759086597647973 1.0482839590562567 0.23457445671921195 0.053464189554704764 187.667074645953 330107.08394041593 0.006570562857657416 0.020575104894133667 1.6767158716632633e-06 5.7755405246468685 0.07237529929145936 RQS(ph)PSPSTR ddPTM_A549_MK2206_60min_R1 2 RQSPSPSTR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RQS(0.861)PS(0.137)PST(0.001)R;RQS(0.88)PS(0.077)PS(0.008)T(0.035)R 55.04 0.0077391000000000005 109315000.0 2313.06 2697.3999999999996 2228.3199999999997 2210.65 2330.3999999999996 2055.34 1949.04 2121.2200000000003 3146.7 3527.7 3036.5 True False 2703.447979112481 2834.6861384730696 2544.329282996722 2752.259349239851 1987.6012470622127 2272.834714575729 2303.155339217598 2421.9094309638012 2433.97747424734 2730.790119905946 2282.4532468633556 1.184448348647524 1.2419470770621988 1.1147344579755347 1.2058338338461578 0.8708179454688322 0.9957858798199504 1.0090701057656677 1.0610992511202988 1.0663865634891823 1.1964276261337288 1.0 11.156369593410819 -6.724666567599515 24.99976624199765 1.0206005813420258 1.1855410632654313 0.4862343743280524 0.07796727898231547 83.25164519269805 56597.74348382749 0.00840128311345912 0.017488284938441036 1.8850958285752396e-07 6.724666567599515 0.1649404819234055 RQS(ph)PSPSTR ddPTM_A549_PD325901_60min_R1 1 RQSPSPSTR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RQS(0.905)PS(0.033)PS(0.007)T(0.056)R 49.28 0.012782 60379000.0 958.59 859.92 940.59 921.51 1016.3 1036.9 735.53 1113.1 1150.1 1157.5 1255.2 True False 1055.9053511233396 932.3884762895029 1004.4240936271524 978.4295797989439 944.9185940446648 1028.4558301830996 763.52099664746 1090.8983472899426 1101.7652965804843 1084.4152524598146 1100.8183573683773 0.9592003476827848 0.8469957555199898 0.9124339968569696 0.8888201884078163 0.8583783034865013 0.9342647888264981 0.6935939899046903 0.9909885132165224 1.0008602138634124 0.985099172085233 1.0 10.10436071855701 -8.478322958792974 24.99603847577724 1.0001704028599259 0.8716620407052713 0.45672984285268037 0.06484917788324068 264.22289882314425 148230.7405639283 0.009620265002420428 0.011630011821410968 3.324122662674147e-09 8.478322958792974 -0.12850836215465455 RQS(ph)PSPSTRPIR ddPTM_A549_MK2206_60min_R1 6 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RQS(0.984)PS(0.015)PS(0.001)T(0.001)RPIR;RQS(0.898)PS(0.102)PSTRPIR;RQS(0.999)PS(0.001)PSTRPIR;RQS(0.998)PS(0.002)PSTRPIR;RQS(1)PSPSTRPIR;RQS(0.995)PS(0.005)PSTRPIR 138.73 2.6976999999999995e-09 766501000.0 9045.31 9214.800000000001 8248.32 7636.18 10520.33 8063.99 7986.199999999999 8310.539999999999 11441.199999999999 12470.599999999999 12938.619999999999 True False 10571.937191402692 9683.793960406929 9418.0558050583 9507.044442801149 8972.803393196882 8917.316069356662 9437.189164952793 9488.584494961347 8849.78646784208 9653.482798792154 9725.60356625428 1.0870211930172649 0.9957010785436061 0.9683775141459494 0.977527448865849 0.9225960457950959 0.9168907624713186 0.9703448326536543 0.9756293715162998 0.9099472755139748 0.9925844430146866 1.0 13.247572070495806 -4.939375503341706 1.2180227828199484 0.9545850115478867 1.2450672490470611 0.6248696457924134 0.028806128441423138 1.6722553512418783 1.2272406248297862 0.005138162477420058 0.737122366473568 1.1498058042839278e-05 4.939375503341706 0.29048223749917446 RQS(ph)PSPSTRPIR ddPTM_A549_PD325901_60min_R1 7 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RQS(0.983)PS(0.017)PSTRPIR;RQS(0.994)PS(0.006)PSTRPIR;RQS(0.984)PS(0.012)PS(0.002)T(0.002)RPIR;RQS(0.954)PS(0.045)PSTRPIR;RQS(0.997)PS(0.002)PSTRPIR;RQS(0.996)PS(0.004)PSTRPIR;RQS(0.996)PS(0.004)PSTRPIR 123.29 1.7853999999999999e-06 885639800.0 9977.63 11319.12 10540.89 10233.87 11913.849999999999 10776.539999999999 10544.409999999998 11458.68 12375.71 12120.52 12722.77 True False 10990.551652457014 12273.021966855089 11256.258182920834 10865.992907094904 11077.062276551236 10688.779431190449 10945.683292672547 11230.127638239435 11855.601946390809 11355.228298699121 11157.949946284001 0.9849973969561732 1.0999352054758451 1.0088106002545363 0.9738341684095536 0.9927506692428116 0.957951907173611 0.9809761959290607 1.0064687234037533 1.0625251057286873 1.017680519572578 1.0 13.445784364242213 -8.547148721155303 24.8708448275257 1.0297873891513614 1.0006605609453907 0.08853401465090538 0.03725411616100879 402.56775603662754 412532.7550985662 0.007073791254322301 0.008021180036801663 2.8369473689872764e-09 8.547148721155303 -0.02912682820597068 RQS(ph)SGS(ph)ATNVASTPDNR ddPTM_A549_PD325901_60min_R1 2 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 2 RQS(0.87)S(0.309)GS(0.644)AT(0.177)NVASTPDNR;RQS(0.898)S(0.222)GS(0.833)AT(0.048)NVASTPDNR 90.53399999999999 1.4719999999999998e-06 7888500.0 926.05 743.53 738.4 898.6500000000001 777.98 518.52 707.14 858.66 1039.22 803.4 972.5699999999999 True False 1020.0619142780216 806.1898825187624 788.5122643599115 954.1575695177706 723.3373686852977 514.2973450347582 734.0505996618558 841.5333526942605 995.5451973848983 752.6731868908979 852.9500556291931 1.1959222085114416 0.9451782987739683 0.9244530311663465 1.1186558500355803 0.8480418799571044 0.6029630242011979 0.8606020889703453 0.9866150393454036 1.1671787706848995 0.8824352398167976 1.0 9.736317456985802 -8.538768852931955 9.080236984021184 1.0789164148589083 0.9204623111021142 0.018831553358704678 0.15898666509844522 0.2743243004974122 135.6525426048037 0.02671993603442613 0.030517232891461375 2.892218815166695e-09 8.538768852931955 -0.15845410375679414 RQS(ph)SGSATNVAST(ph)PDNR ddPTM_A549_MK2206_60min_R1 1 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 2 RQS(0.442)S(0.134)GS(0.18)AT(0.245)NVAS(0.232)T(0.768)PDNR 72.316 0.00033889 5901400.0 138.84 312.95 210.29 176.0 264.08 413.1 209.97 211.9 142.43 250.06 311.18 True False 162.2727976879013 328.8778182824745 240.11228410703157 219.12000790094024 225.23418182466057 456.81396780641296 248.1188311042972 241.93747391653358 110.16983241397297 193.57127232578753 233.90541786890773 0.6937539077390976 1.4060290748237136 1.0265357950862108 0.9367889375856442 0.9629284514944114 1.9529858349088531 1.060765643501919 1.0343389055320105 0.47100162714365873 0.8275621577704306 1.0 7.869781468489782 -8.566028316118617 7.638247936642719 0.7497102548852956 1.161066335984821 0.20679699256291906 0.3260999729917263 0.24836502022538798 37.111157323229804 0.058566754645676206 0.06654712337507089 2.7162621620319712e-09 8.566028316118617 0.4113560810995254 RQS(ph)SGSATNVASTPDNR ddPTM_A549_MK2206_60min_R1 7 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.756)S(0.222)GS(0.02)AT(0.003)NVASTPDNR;RQS(0.269)S(0.269)GS(0.231)AT(0.231)NVASTPDNR;RQS(0.924)S(0.02)GS(0.026)AT(0.026)NVAS(0.004)T(0.001)PDNR;RQS(0.711)S(0.227)GS(0.062)ATNVASTPDNR;RQS(0.979)S(0.021)GSATNVASTPDNR;RQS(0.507)S(0.175)GS(0.175)AT(0.143)NVASTPDNR;RQS(0.977)S(0.017)GS(0.002)AT(0.002)NVAS(0.001)TPDNR 167.05 1.1547e-23 405478800.0 2332.24 2831.66 2873.02 2643.3500000000004 3384.55 2492.7400000000002 2286.94 2273.6 3328.629999999999 3291.6200000000003 3591.23 True False 2725.8650942065037 2975.7793990022433 3280.457437277967 3290.970868664493 2886.6871784862756 2756.5200922531076 2702.4473953691536 2595.88976260798 2574.7006197298506 2548.040755870625 2699.428478094217 1.0097934123192442 1.1023738628937962 1.2152414720000115 1.2191361598837032 1.0693697580475487 1.0211495191008717 1.0011183542366227 0.9616442086439961 0.9537947164088512 0.9439186022329916 1.0 11.39843827745751 -7.233039520902486 2.23136593023472 0.9785903824834401 1.1391011471559689 0.6277057037436996 0.05653405549553888 0.15687089526550813 1.5266083976431035 0.008909754769792819 0.01627914359004905 5.8473687052719484e-08 7.233039520902486 0.16051076467252878 RQS(ph)SGSATNVASTPDNR ddPTM_A549_PD325901_60min_R1 7 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.825)S(0.076)GS(0.076)AT(0.015)NVAS(0.004)T(0.004)PDNR;RQS(0.826)S(0.085)GS(0.085)AT(0.005)NVASTPDNR;RQS(0.82)S(0.153)GS(0.027)ATNVASTPDNR;RQS(0.996)S(0.004)GSATNVASTPDNR;RQS(0.289)S(0.289)GS(0.234)AT(0.189)NVASTPDNR;RQS(0.907)S(0.071)GS(0.022)ATNVASTPDNR;RQS(0.985)S(0.015)GSATNVASTPDNR 214.5 3.0783999999999998e-55 376599500.0 5785.17 5396.429999999999 5840.58 5726.780000000001 6638.849999999999 6942.5 6550.07 7003.66 6820.9400000000005 7125.49 9089.970000000001 True False 6372.4761995829385 5851.206094872729 6236.956881060685 6080.510194138964 6172.560078789155 6885.962581778537 6799.336498185833 6863.966507035019 6534.279612257794 6675.585345356272 7971.961316067431 0.7993611542920133 0.7339732172407392 0.782361659042442 0.7627370421233404 0.7742837470056967 0.8637727039517777 0.8529063587503641 0.8610135241374973 0.8196577169896698 0.8373830580313627 1.0 12.960718994180116 -14.999999999988965 0.14690466994690826 1.7239319717959543 0.7343682012089274 0.3156420675805123 0.05664923543613966 16.234780548877513 0.1580131994301406 3.4027419321777304 0.06593436690185621 1.0000000000254085e-15 14.999999999988965 -0.9895637705870268 RQS(ph)SPSCGPVAETSSIGNGDGISK ddPTM_A549_MK2206_60min_R1 2 RQSSPSCGPVAETSSIGNGDGISK 24 1 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 RQS(0.823)S(0.17)PS(0.008)CGPVAETSSIGNGDGISK;RQS(0.735)S(0.183)PS(0.079)CGPVAET(0.003)SSIGNGDGISK 118.55 3.0918000000000003e-16 10803600.0 4754.6 6701.1 5428.0 4598.4 7738.5 5721.799999999999 4260.1 4246.2 8201.7 9005.5 8291.7 True False 5557.060241190551 7042.157367287715 6197.7720202243 5725.008206430021 6600.176901128963 6327.277078176554 5034.105026372416 4848.11185344212 6344.028045423587 6971.15129540862 6232.642050721845 0.8916058705067058 1.1298831715311028 0.9944052569979521 0.9185523827358204 1.0589693499828938 1.0151837738609981 0.8077000067394183 0.7778582203161541 1.0178713928692313 1.1184905596497785 1.0 12.605628143812726 -4.323959858917176 15.965374567409631 0.9824516401316089 0.9799403407138946 0.0 0.11020932938053327 0.0 0.0 0.013478431491976433 0.0 4.742858206470355e-05 4.323959858917176 -0.00251129941771433 RQS(ph)SSSAGDSDGEREDSAAER ddPTM_A549_MK2206_60min_R1 2 RQSSSSAGDSDGEREDSAAER 21 2 I3L3Z2;Q9BRA0 I3L3Z2 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit 1 RQS(0.795)S(0.163)S(0.034)S(0.007)AGDSDGEREDSAAER;RQS(0.978)S(0.022)S(0.001)SAGDSDGEREDSAAER 153.84 4.5865e-24 38283000.0 601.41 649.14 261.55 355.849 815.08 538.76 509.72 409.77 763.36 1037.16 1026.23 True False 702.9133049371993 682.1784532988833 298.64172289787496 443.03202097466857 695.1828117299472 595.7712256000556 602.3295260774511 467.85615236799447 590.4601788354308 802.8648356610968 771.3887684928634 0.9112309300413445 0.8843510317524081 0.38714813476136045 0.5743304013101759 0.9012094032535538 0.772335882934971 0.7808378222232615 0.6065114913224496 0.765450837440983 1.0408044146529787 1.0 9.591314330092436 -10.320592820907105 0.6520820740043053 1.0093599198830858 0.7220231509947079 0.3433474187192116 0.15180665186836134 0.7935098378430048 0.6024452562123493 0.11899454402070572 0.03363311619154332 4.779771981031291e-11 10.320592820907105 -0.2873367688883779 RQS(ph)SSYDDPWK ddPTM_A549_MK2206_60min_R1 4 RQSSSYDDPWK 11 1 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCF0;H7C1V2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RQS(0.669)S(0.176)S(0.15)Y(0.005)DDPWK;RQS(0.797)S(0.097)S(0.097)Y(0.009)DDPWK;RQS(0.898)S(0.051)S(0.051)YDDPWK;RQS(0.954)S(0.045)S(0.002)YDDPWK 126.63 4.1478999999999997e-07 56510400.0 14650.7 14171.900000000001 10574.099999999999 9974.099999999999 19837.1 13624.5 12543.8 13694.699999999999 20712.9 17656.2 18793.0 True False 17123.379984774816 14893.189176920914 12073.666381550054 12417.754947754358 16919.08886804746 15066.235546788852 14822.846090422838 15635.965663259813 16021.461221704552 13667.652157236538 14126.179439586036 1.2121734725236233 1.0542970405136916 0.8547014734724246 0.8790596920322186 1.1977115921828663 1.06654708806604 1.049317414791187 1.10687859588155 1.1341680381609294 0.9675406018796165 1.0 13.786083707297099 -6.757912554200244 24.999982062708067 1.0749833014156924 0.9935495727455087 0.10324409392015566 0.10503339175925225 162.30672210069596 1150494.2334458681 0.015239210478714033 0.030761813697590606 1.7461737120386233e-07 6.757912554200244 -0.08143372867018372 RQS(ph)SSYDDPWK ddPTM_A549_PD325901_60min_R1 2 RQSSSYDDPWK 11 1 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCF0;H7C1V2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RQS(0.432)S(0.184)S(0.384)YDDPWK;RQS(0.663)S(0.315)S(0.021)YDDPWK 133.48 2.7407e-08 43771000.0 8099.4 6793.5 6544.1 6311.2 6555.5 6652.4 5564.9 5781.3 8465.8 8935.2 12045.4 True False 8921.645125536854 7366.012086790322 6988.221978870121 6701.028490224846 6095.064295247269 6598.22505999619 5776.675314730128 5665.987436157885 8110.011866612523 8371.029947109231 10563.892162081787 0.8445414804176398 0.6972820219833378 0.6615196247415098 0.6343332918786914 0.5769714610610089 0.6246017053903645 0.5468320980656186 0.5363541533011361 0.7677105883116392 0.7924191026065514 1.0 13.366853858978159 -9.676911790023432 0.9235624249776337 0.9638594038625296 0.6405537477474296 0.44457348845416156 0.10070596864279462 0.20804633777531711 0.37091648836433533 0.030696871889864794 0.019288673359634082 2.1042057836586242e-10 9.676911790023432 -0.3233056561151 RQS(ph)SSYDDPWKITDEQR ddPTM_A549_PD325901_60min_R1 1 RQSSSYDDPWKITDEQR 17 2 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1;Q96D71-2;H0YCF0;H7C1V2 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RQS(0.86)S(0.065)S(0.065)Y(0.004)DDPWKIT(0.006)DEQR 43.176 0.022118000000000002 4894900.0 3233.5 3149.6 3934.7 3929.0 3358.3 3935.3 4218.3 4194.7 4462.0 5087.5 5653.9 True False 3561.762539623113 3415.027845522161 4201.732403273214 4171.68540659358 3122.4245935060494 3903.2522215445565 4378.8297148423335 4111.033417821511 4274.477657022975 4766.274381761816 4958.506143025072 0.7183136285175927 0.688721108135752 0.8473786826267463 0.841318995331229 0.6297107442123948 0.7871830968758811 0.8830945426984808 0.8290870877722586 0.8620494829951373 0.961231920316634 1.0 12.275689827720976 -9.995701888066327 0.1838908418520013 1.1342756580974753 0.6817874953076454 0.6261319222871261 0.06496420767429202 2.8078550734492147 0.21625345350324301 0.3607481255142359 0.13736915278426914 1.0099459034382446e-10 9.995701888066327 -0.45248816278982995 RQS(ph)STPSAPELGQQPDVNISEWK ddPTM_A549_MK2206_60min_R1 4 RQSSTPSAPELGQQPDVNISEWK 23 1 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 RQS(0.533)S(0.398)T(0.06)PS(0.009)APELGQQPDVNISEWK;RQS(0.439)S(0.439)T(0.116)PS(0.006)APELGQQPDVNISEWK;RQS(0.455)S(0.455)T(0.077)PS(0.013)APELGQQPDVNISEWK;RQS(0.452)S(0.452)T(0.081)PS(0.015)APELGQQPDVNISEWK 133.46 1.6356e-22 19523400.0 5283.08 5500.92 4874.1900000000005 4405.8099999999995 8056.299999999999 6043.66 5239.37 5624.71 8277.3 8001.800000000001 8088.4000000000015 True False 6174.734745095055 5780.8933316709745 5565.4234346457415 5485.233647784326 6871.228942116076 6683.196089743172 6191.295709496217 6422.029867451941 6402.504766131985 6194.1878225085475 6079.827051516401 1.0156102620641128 0.950831871151521 0.9153917352398437 0.9022022503775375 1.1301684873424627 1.0992411516173444 1.0183341823764565 1.0562849589364864 1.0530735022364004 1.0188098723899757 1.0 12.569814569602588 -6.741663678801762 24.99969812550967 1.0392551982535299 0.9441665687959394 0.5551017115371161 0.04520541557477048 171.41642707467994 216696.93328723894 0.007011093680620067 0.014579194455359067 1.8127433524774227e-07 6.741663678801762 -0.09508862945759045 RQS(ph)STPSAPELGQQPDVNISEWK ddPTM_A549_PD325901_60min_R1 1 RQSSTPSAPELGQQPDVNISEWK 23 1 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 RQS(0.442)S(0.442)T(0.114)PS(0.001)APELGQQPDVNISEWK 152.15 3.3639999999999997e-28 17962000.0 1751.4 1759.0 1527.2 1460.5 1950.2 2184.2 1862.8 1785.8 2664.1 2371.5 2794.3 True False 1929.2008386874638 1907.2371032110366 1630.8449757996436 1550.7117679638402 1813.2246798247618 2166.412599369202 1933.6898733632722 1750.1808180670025 2552.137141657307 2221.763085277277 2450.618814527136 0.7872300772569221 0.7782675509977472 0.6654829246115646 0.6327837519124985 0.7399048228455866 0.8840267554165606 0.7890618736379821 0.7141791321000334 1.0414255887241117 0.9066130856854544 1.0 11.258930379980931 -8.763070142861357 24.999811095438822 1.019562098979536 0.7487445988766932 0.6668500739384915 0.07233132038190711 14.535000886937917 222822.51807576756 0.011948335788554391 0.013049440704063307 1.7255591745812898e-09 8.763070142861357 -0.2708175001028428 RQS(ph)TLPTQK ddPTM_A549_MK2206_60min_R1 1 RQSTLPTQK 9 1 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8YFM1;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 RQS(0.587)T(0.412)LPT(0.001)QK 45.077 0.021228 9799400.0 2167.1 2132.5 2517.5 1666.2 2477.7 1924.6 1852.6 1913.6 3196.5 3341.3 3447.2 True False 2532.853499491868 2241.035141356054 2874.519355363794 2074.4190747985613 2113.2336121893427 2128.2598945539144 2189.193439557178 2184.8586601542183 2472.4978537615984 2586.4980093663676 2591.1651021199914 0.9774959910580708 0.8648754722431717 1.10935399408242 0.8005738704574832 0.815553439825342 0.8213524845686808 0.8448683712844327 0.8431954638346477 0.9542031311469485 0.9981988439293947 1.0 11.339385227783765 -8.946465576773864 4.039588574409904 0.9809143703796496 0.8830513506514018 0.21648320342349814 0.08506517858807627 0.253077365464963 7.9931954485961425 0.015493485161729388 0.016068768994265258 1.1311870463889054e-09 8.946465576773864 -0.09786301972824774 RQS(ph)VGDFVSGALNK ddPTM_A549_MK2206_60min_R1 2 RQSVGDFVSGALNK 14 1 Q6P4F7-3;Q6P4F7;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 RQS(1)VGDFVSGALNK;RQS(1)VGDFVSGALNK 97.62100000000001 1.748e-05 15336900.0 3268.0 4203.700000000001 3792.4 3623.5 4859.7 3911.8999999999996 3594.1000000000004 3685.3999999999996 5349.4 5374.6 5217.6 True False 3819.558505071027 4417.6503745455775 4330.21934589142 4511.257662665095 4144.844567605661 4325.854661490941 4247.101447216052 4207.8167360641455 4137.7694412364435 4160.474127178188 3921.9259215656966 0.9738986868844777 1.1263982193681974 1.1041053381657768 1.1502659032540135 1.056839076132007 1.1029924450393467 1.0829122049099134 1.072895516186679 1.055035083269645 1.0608242507337464 1.0 11.937346570421848 -9.576009507636115 0.574643065775409 1.0025485805903407 1.0913499432018272 0.12747252884239824 0.04597127185255769 0.5579186872815578 0.4047573518506038 0.020666462533769223 0.010756678266707032 2.654547447611902e-10 9.576009507636115 0.08880136261148652 RQS(ph)VGDFVSGALNK ddPTM_A549_PD325901_60min_R1 1 RQSVGDFVSGALNK 14 1 Q6P4F7-3;Q6P4F7;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 RQS(0.998)VGDFVS(0.002)GALNK 48.376000000000005 0.012469 43320000.0 1932.0 1940.1 2268.1 2419.7 2625.6 2736.2 2170.4 1866.4 2613.2 3031.1 3090.7 True False 2128.1352177367726 2103.5990357815413 2422.0269051932755 2569.1593734625812 2441.186913828269 2713.9172943842177 2252.9957596884524 1829.1731878375247 2503.3762916477895 2839.715828709237 2710.563493561541 0.7851264959451337 0.7760744364698576 0.8935510682359471 0.9478322052094187 0.9006197123317246 1.0012373076043573 0.8311909184345031 0.6748313375364196 0.9235630515920813 1.0476477807859785 1.0 11.404377086373984 -14.999999993312178 0.1401737785004083 1.5155627970857388 0.8158735069581494 0.31232050004745937 0.08933209324243845 71.05453135637006 0.6686478290952356 9.951406682594651 0.2257080614587589 1.000000015399279e-15 14.999999993312178 -0.6996892901275894 RQS(ph)VS(ph)PPYKEPSAYQSSTR ddPTM_A549_MK2206_60min_R1 2 RQSVSPPYKEPSAYQSSTR 19 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RQS(0.998)VS(0.961)PPY(0.021)KEPS(0.009)AYQS(0.004)S(0.004)T(0.004)R;RQS(0.998)VS(0.874)PPY(0.014)KEPS(0.068)AYQS(0.016)S(0.014)T(0.016)R 59.428999999999995 0.0030175 20404900.0 4103.799999999999 4565.8 3773.8 3178.4 6772.799999999999 5938.1 4882.1 4994.9 7299.200000000001 6174.8 7411.7 True False 4796.4211117229115 4798.179717891428 4308.981586205314 3957.1081426837977 5776.530091873905 6566.465800608231 5769.114375074004 5702.942371239705 5645.942854427235 4779.908391415153 5571.170337486292 0.8609360010857348 0.8612516629775787 0.7734428001979784 0.7102831008518835 1.0368611515978654 1.1786510558517613 1.03553006381008 1.0236524869589374 1.0134213302432753 0.8579720421134789 1.0 12.443764711460725 -6.774894646140419 24.999659029834124 1.025067361010434 0.8037453722388185 0.6402730209509689 0.0790595745614215 89.1095454179414 165564.06044698617 0.009489967354541707 0.01800550401831083 1.67921132225564e-07 6.774894646140419 -0.22132198877161546 RQS(ph)VS(ph)PPYKEPSAYQSSTR ddPTM_A549_PD325901_60min_R1 2 RQSVSPPYKEPSAYQSSTR 19 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RQS(0.999)VS(0.988)PPY(0.012)KEPS(0.001)AYQSSTR;RQS(1)VS(0.996)PPY(0.001)KEPS(0.002)AY(0.001)QS(0.001)STR 56.298 0.0025025 32776000.0 6634.8 5519.8 7233.5 5849.3 6308.8 6259.5 6209.0 6696.4 6736.299999999999 6404.6 7270.4 True False 7308.360011718389 5984.972917739783 7724.408808569094 6210.597976275856 5865.691652178471 6208.52470733061 6445.286892695166 6562.835048775822 6453.196737114267 6000.212462984129 6376.186890862854 1.1461960160219502 0.9386445253535958 1.2114464241376388 0.9740301033483996 0.919937221505234 0.9737049452279221 1.0108371983153965 1.0292726924583149 1.012077727263887 0.941034597273568 1.0 12.638478201093594 RQSLPAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RQSLPASPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RQSLPAS(1)PR;RQSLPAS(1)PR 63.727 0.0027588 11366400.0 852.48 949.59 665.8399999999999 882.06 1204.45 716.03 618.3199999999999 880.21 1141.67 1493.07 1383.35 True False 996.35778286504 997.920074973175 760.2661241610438 1098.1647395971775 1027.2770005252667 791.7998193377532 730.6607403362817 1004.9824630300707 883.083567872362 1155.7844500178505 1039.8260164822727 0.9581966281587322 0.9596990834573794 0.7311474343881307 1.0561043118658104 0.9879316195612614 0.7614733684163904 0.7026759561259143 0.9664909774328616 0.8492608896821318 1.1115171496938159 1.0 10.022126441724492 -10.858662059876814 1.0446957560915324 1.0016420928268794 0.8824056038732341 0.21441627845845435 0.11473536282056608 0.911219316714974 1.7244048155031184 0.08158170777742747 0.018733465819426805 1.38464340060767e-11 10.858662059876814 -0.11923648895364536 RQSLPAS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RQSLPASPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RQSLPAS(1)PR 66.498 0.0022339 6077800.0 1279.0 1123.0 1066.5 1203.6 1280.6 1307.1 961.02 1144.6 1210.6 1559.6 1497.9 True False 1408.8431384499645 1217.639151168843 1138.87910338549 1277.943638426071 1190.655073830166 1296.4554109676242 997.5921419903219 1121.77005507867 1159.7226919749014 1461.1265898369988 1313.6677959704384 1.072450084238548 0.9269003586019579 0.8669460474549977 0.9728057902812658 0.9063593379409899 0.9868974598786605 0.7593945326591311 0.8539221700643055 0.8828127594603824 1.1122496831534407 1.0 10.359384773640162 -5.262891825703931 6.663196032993799 0.9226697081063665 1.0750890644658329 0.18380220861041674 0.08785651882877293 0.12328097438249133 35.71317191722079 0.010157306156152027 0.08496754126070966 5.458938156750811e-06 5.262891825703931 0.15241935635946635 RQSMAFSILNT(ph)PK ddPTM_A549_PD325901_60min_R1 1 RQSMAFSILNTPK 13 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 RQS(0.003)MAFS(0.003)ILNT(0.994)PK 42.647 0.05018 16818000.0 1280.2 1404.4 1465.7 1371.8 1963.2 1316.4 1397.4 1660.2 2072.4 1903.2 1874.1 True False 1410.1649615665717 1522.7537167422292 1565.171215970101 1456.5329704161552 1825.311604672325 1305.6796748510299 1450.5788216866215 1627.0860085982965 1985.3042349651312 1783.0316271978556 1643.5975808987223 0.857974590590168 0.9264760026658013 0.9522837184478347 0.8861858811082699 1.1105587072440453 0.7944035024297624 0.8825632493894535 0.9899540054741397 1.2079016530795592 1.0848346626446668 1.0 10.682641396875582 -8.544045379994396 8.933722290801052 1.0983147780505735 0.9204374739807313 0.4607772072481833 0.08605016134132241 0.17239538888092787 64.81827914577349 0.01686355685109049 0.019219855052713734 2.8572919656278182e-09 8.544045379994396 -0.17787730406984226 RQSS(ph)GS(ph)ATNVASTPDNR ddPTM_A549_MK2206_60min_R1 1 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 2 RQS(0.459)S(0.655)GS(0.864)AT(0.022)NVASTPDNR 69.08800000000001 0.00039112 4182500.0 451.31 283.62 424.28 198.73 285.82 102.62 314.32 164.19 367.42 557.53 470.71 True False 527.4800945298668 298.05504656103346 484.4492838505462 247.41885892132873 243.7762566234645 113.47918028635706 371.4278753760187 187.46443531078646 284.19995664917445 431.58358577859866 353.8197160648937 1.4908160019921621 0.8423924191561091 1.3691981024644027 0.6992794569874955 0.6889843769439737 0.32072599443707644 1.0497659076406456 0.5298303819688889 0.8032338045205192 1.2197838791421176 1.0 8.466870632027309 -6.266500402571051 24.71023076350651 0.8198798825048811 1.1949612012993067 0.33010370085394214 0.27841204506409567 329.9547836798786 1610994.9147891765 0.03559809035811326 0.08514656156355042 5.413767460510594e-07 6.266500402571051 0.37508131879442563 RQSS(ph)TPSAPELGQQPDVNISEWK ddPTM_A549_PD325901_60min_R1 1 RQSSTPSAPELGQQPDVNISEWK 23 1 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 RQS(0.27)S(0.565)T(0.153)PS(0.012)APELGQQPDVNISEWK 128.03 2.8881e-22 16310000.0 2373.1 2015.2 2043.5 1696.6 2175.0 2317.3 2103.1 2080.8 2635.7 2219.1 2991.9 True False 2614.0153650161146 2185.0279763450144 2182.1841985637575 1801.395128741835 2022.2355033426586 2298.4286770983654 2183.134621360479 2039.2968116439781 2524.930694893646 2078.9856472860256 2623.9152672167397 0.9962270495833784 0.8327357226983685 0.8316519309247593 0.686529458953385 0.7706939048712882 0.8759538487446559 0.832014146430952 0.7771961378185498 0.9622760027506188 0.7923219447140394 1.0 11.357505417140963 -8.840558579493148 5.756108961357169 0.9833377050813225 0.8214411704049133 0.06177111892944709 0.09224084896148345 0.12277359661804464 6.76309088921325 0.012784881812557172 0.0135831378809564 1.4435818746740514e-09 8.840558579493148 -0.1618965346764092 RQSSGS(ph)ATNVAS(ph)TPDNR ddPTM_A549_PD325901_60min_R1 1 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 2 RQS(0.202)S(0.298)GS(0.389)AT(0.112)NVAS(0.597)T(0.403)PDNR 66.045 0.00057068 6850800.0 207.43 181.08 176.48 174.06 216.51 231.1 233.79 286.35 306.99 199.43 456.72 True False 228.4881408981049 196.34024710031534 188.45699406045117 184.8112908810585 201.30308451895135 229.21799822096074 242.6870063847968 280.63852461277077 294.088277886482 186.83795576506327 400.54633538661994 0.5704412216817836 0.49018110953580823 0.47049985834609254 0.46139803202212004 0.5025712801108199 0.5722633762201627 0.6058899681370138 0.7006393513546681 0.734217871704203 0.4664577834290292 1.0 8.645825333696727 -9.246508188195099 0.3773193957213278 1.0254166306890025 0.46573047558101416 0.0 0.15882941922332205 0.1597091614095306 0.05818785690253799 0.03347690944428542 0.02008796016186069 5.668808834412019e-10 9.246508188195099 -0.5596861551079884 RQSSGS(ph)ATNVASTPDNR ddPTM_A549_PD325901_60min_R1 1 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.179)S(0.259)GS(0.377)AT(0.185)NVASTPDNR 92.098 2.0827e-06 51205000.0 422.6 238.03 206.85 202.12 409.91 375.06 238.22 223.32 350.96 306.56 331.5 True False 465.5020408983231 258.0896234663576 220.88808489009708 214.6044933521747 381.1193357127311 372.00563571074684 247.28559245898583 218.8657074088491 336.2103716962757 287.2037492821433 290.727601551639 1.6011621821041326 0.8877369127971007 0.7597767935042898 0.7381634636918252 1.310915556963506 1.2795676562023 0.8505748719392334 0.7528205311114026 1.1564446234271912 0.987879196021676 1.0 8.183524236588863 -5.253228929468208 24.380879954926684 1.019476397338874 1.6011625940547236 0.4359761022328703 0.19915537895157603 587.5465548190322 1744658.5764241256 0.028501484252235133 0.43919154933180304 5.581758861533607e-06 5.253228929468208 0.5816861967158495 RQSSGSAT(ph)NVAS(ph)TPDNR ddPTM_A549_PD325901_60min_R1 1 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 2 RQS(0.188)S(0.211)GS(0.266)AT(0.337)NVAS(0.586)T(0.412)PDNR 54.117 0.0055317 7885100.0 127.39 242.83 204.89 279.26 227.64 188.54 191.0 137.62 205.53 203.54 320.56 True False 140.32253902043854 263.29413631195916 218.7950675036595 296.5092559545235 211.6513517153669 187.00459275023775 198.26860951921037 134.87506113919852 196.89228884982785 190.6884496636463 281.1331521972652 0.4991319519726268 0.9365460254477965 0.7782613533609001 1.0546933139584662 0.7528509180121725 0.6651815742421604 0.705248057618226 0.47975509143994355 0.700352439087912 0.6782851761639419 1.0 8.135109781132348 -10.676873694672166 1.0526792704704382 0.9931558369633114 0.7386320838930719 0.0 0.1827988416979066 0.53939841648862 1.1046865759640356 0.09524419717464108 0.028055579340537772 2.104390368030882e-11 10.676873694672166 -0.25452375307023956 RQSSIFGGADVGFSGGIPS(ph)PDKGHR ddPTM_A549_MK2206_60min_R1 2 RQSSIFGGADVGFSGGIPSPDKGHR 25 2 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 RQSSIFGGADVGFS(0.003)GGIPS(0.997)PDKGHR;RQSSIFGGADVGFSGGIPS(1)PDKGHR 81.96700000000001 5.517e-07 8982600.0 6083.4 8034.099999999999 8874.5 8332.6 11008.3 8165.6 8207.8 8327.3 12314.4 10860.1 11207.6 True False 7110.12919514966 8443.001373584373 10133.037544856395 10374.087374064631 9388.993652606832 9029.678372113407 9699.051016515932 9507.72027628669 9525.20806205594 8406.795867332981 8424.443605975874 0.8439879863527241 1.0022028478646752 1.2028138615194162 1.2314270068477613 1.114494213712435 1.0718426989894276 1.1512987053098578 1.1285873252854817 1.130663163950583 0.9979051745767075 1.0 13.040365691027056 -5.404447957727024 3.5542373510466296 1.096038493049392 0.8449015837847703 0.5494261077207016 0.07131798494312529 0.17114740818506424 3.50656947068513 0.011199062985278256 0.08793022472442268 3.940506445986872e-06 5.404447957727024 -0.25113690926462173 RQSSIFGGADVGFSGGIPS(ph)PDKGHR ddPTM_A549_PD325901_60min_R1 3 RQSSIFGGADVGFSGGIPSPDKGHR 25 2 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 RQSSIFGGADVGFSGGIPS(1)PDKGHR;RQSSIFGGADVGFSGGIPS(1)PDKGHR;RQSSIFGGADVGFS(0.005)GGIPS(0.995)PDKGHR 89.396 5.506e-09 18133600.0 5569.200000000001 5991.2 6089.400000000001 6115.2 6990.5 6690.3 5798.7 6651.700000000001 7084.8 6134.7 6717.8 True False 6134.581084171651 6496.099450118232 6502.663302536899 6492.922015373141 6499.5113959158025 6635.816414961893 6019.372701670397 6519.0266253423 6787.050494055665 5747.353995045547 5891.5531876428395 1.0412502253291285 1.1026123745676082 1.1037264869603187 1.102073054180625 1.1031914995774148 1.1263271676609996 1.02169538489369 1.1065039078346175 1.1519968127065499 0.9755244180940704 1.0 12.524432305936246 -11.01015883523967 1.2979803185130658 1.0000914186945655 1.1015126984171544 0.5608180189160854 0.03583459891787919 0.2929514170248172 0.8801169818083501 0.025983167891532568 0.005919446498999374 9.768798797190433e-12 11.01015883523967 0.10142127972258885 RQSSSSAGDS(ph)DGEREDSAAER ddPTM_A549_PD325901_60min_R1 2 RQSSSSAGDSDGEREDSAAER 21 2 I3L3Z2;Q9BRA0 I3L3Z2 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit 1 RQS(0.016)S(0.002)S(0.011)S(0.001)AGDS(0.97)DGEREDS(0.001)AAER;RQS(0.089)S(0.012)S(0.07)S(0.012)AGDS(0.818)DGEREDSAAER 169.36 1.1119000000000001e-35 70755000.0 564.35 949.0 811.24 848.0 963.0 835.57 651.34 880.38 653.25 662.24 985.47 True False 621.6423965474881 1028.9755605157902 866.2956247824142 900.3790340522667 895.3622021696461 828.7653949523504 676.1271001269242 862.8201302552503 625.7961742380677 620.4260533814145 864.2634374090306 0.7192742046465666 1.1905809224101265 1.0023513517816696 1.0417877178184314 1.0359829693291738 0.9589268261039718 0.7823159824438264 0.9983300147949019 0.7240803522987593 0.7178668291711905 1.0 9.755327319194032 -7.544707537533831 10.500166227633837 0.8720344543429989 1.0100000297957787 0.21364361163245515 0.13648466480961313 0.5318119050924588 249.19736093801268 0.021105748338833726 0.031420098064899926 2.8529388460178146e-08 7.544707537533831 0.13796557545277988 RQST(ph)LPTQK ddPTM_A549_MK2206_60min_R1 1 RQSTLPTQK 9 1 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8YFM1;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 RQS(0.224)T(0.776)LPT(0.001)QK 52.693000000000005 0.014459999999999999 11378000.0 1471.5 1569.0 1565.2 1683.5 1992.9 1462.2 1129.2 1348.2 2224.4 2310.6 2763.9 True False 1719.8532252790753 1648.855398259156 1787.1688957360125 2095.957575575186 1699.7470499786675 1616.9290334701932 1334.361023398449 1539.311478689337 1720.5769516368853 1788.6338552186057 2077.5473502406153 0.8278286533781707 0.7936547862883561 0.8602301629991865 1.0088615190081895 0.8181508112350883 0.778287451923984 0.6422770692778229 0.7409272662358616 0.8281770095096092 0.8609353019133121 1.0 11.02066564309157 -10.314536095669402 0.9132982241952742 0.9903266587480957 0.8121042039112533 0.15017337113756557 0.09218669043052662 0.4479425651480624 0.7228052633735648 0.04586695049101489 0.017564876428446362 4.846898267548915e-11 10.314536095669402 -0.1782224548368424 RQST(ph)LPTQK ddPTM_A549_PD325901_60min_R1 1 RQSTLPTQK 9 1 A0A2R8Y700;Q8WXI2-5;A0A2R8YE27;A0A2R8YE71;A0A2R8Y5S6;A0A2R8Y622;A0A2U3TZH5;A0A2R8YFM1;A0A2R8Y7A1;A0A2R8YED7;Q8WXI2;A0A2R8YGJ7;Q8WXI2-4;Q8WXI2-2 A0A2R8Y700;A0A2R8Y7A1 CNKSR2 Connector enhancer of kinase suppressor of ras 2 1 RQS(0.155)T(0.845)LPTQK 72.289 0.0016782 20314000.0 3496.6 3451.5 3771.8 3543.9 3981.1 3747.9 3000.8 3893.9 4370.8 4240.6 4963.7 True False 3851.57225793913 3742.3700180403025 4027.7770296759386 3762.7986542191397 3701.481270049408 3717.3783450122855 3114.9970861007682 3816.2331097945444 4187.1104758664305 3972.847792294677 4353.196367486791 0.8847687843134765 0.859683253893935 0.9252458859330701 0.864376043847408 0.850290443522162 0.8539422601692606 0.7155654886983961 0.8766508072774468 0.9618473697026798 0.9126277468131541 1.0 12.08785938450526 -8.771005697831063 3.5286164918573215 0.9834744590463839 0.8509080546107147 0.4248995222145625 0.05286030639533618 0.1190001023257092 3.0627868325894227 0.008987973111933714 0.009764104874505578 1.6943155713202645e-09 8.771005697831063 -0.13256640443566914 RQT(ph)IEER ddPTM_A549_MK2206_60min_R1 2 RQTIEER 7 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RQT(1)IEER;RQT(1)IEER 61.65 0.017211 8497300.0 1552.6599999999999 1055.06 653.25 808.0999999999999 1166.53 956.65 676.28 721.45 1128.33 1356.95 1540.18 True False 1814.7110491075823 1108.758047474381 745.8906728466327 1006.0845362769879 994.9349822929466 1057.882068027124 799.1513220898897 823.7177468479621 872.7650565727589 1050.4140525572964 1157.7107991944672 1.5674994570062355 0.957715906464596 0.644280655726475 0.8690292402705576 0.8593985501260076 0.9137705796328376 0.6902857973216951 0.7115056259482966 0.7538713961898145 0.9073199051854507 1.0 10.17705919198206 -5.2815915029181255 3.790694555079538 0.8435787409477334 1.6271978275220444 0.8017197107307963 0.10639002197486143 0.0903243935436977 2.483978272409104 0.017378948165181988 0.19025270243420833 5.228877856457317e-06 5.2815915029181255 0.783619086574311 RQT(ph)IEER ddPTM_A549_PD325901_60min_R1 2 RQTIEER 7 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RQT(1)IEER;RQT(1)IEER 85.355 0.008423700000000001 11957500.0 1534.94 1437.7 1386.53 900.49 1626.72 1564.4099999999999 1462.03 1302.54 1355.35 1708.63 1297.65 True False 1690.7659788368946 1558.8600246085882 1480.628263682216 956.1112221388273 1512.4647990793424 1551.669963638482 1517.6683517035149 1276.559817877138 1298.3893528565868 1600.74681020338 1138.0472764810986 1.485672883524515 1.3697673697956245 1.3010252687044739 0.84013313145933 1.328999972440479 1.3634494767531329 1.3335723243380753 1.1217107094393541 1.1408922807418636 1.406573209465403 1.0 10.152344775635337 -2.000000001262465 0.03743136857462895 0.25394258206947024 2.77625132589255 0.0 0.1948592961636829 574.682696444974 1.5963466332833043 30.293956043509834 93.87377217122739 0.009999999970930673 2.000000001262465 2.52230874382308 RQT(ph)TSRPPPAGGR ddPTM_A549_MK2206_60min_R1 2 RQTTSRPPPAGGR 13 2 Q12965;H0YNB0 Q12965 MYO1E Unconventional myosin-Ie 1 RQT(0.956)T(0.038)S(0.006)RPPPAGGR;RQT(0.977)T(0.023)S(0.001)RPPPAGGR 66.965 0.0015995 26255000.0 764.97 856.8199999999999 497.23 519.0799999999999 783.08 732.63 632.96 755.68 816.6 1543.33 1286.2199999999998 True False 894.0782342791257 900.4284782258826 567.7446907914751 646.2546233023869 667.889969339803 810.1564203195654 747.9606388330523 862.7999541729407 631.6414038422404 1194.6906811107638 966.8160761338992 0.9247655850473263 0.9313337877319054 0.5872313305564495 0.6684359510100698 0.6908138846951729 0.8379633317220129 0.7736328111381792 0.8924137439078405 0.6533211635950923 1.2356959204568554 1.0 9.917097652085737 -10.984360894971976 1.219185156623504 1.0017832028316158 0.760450404412224 0.44831172829693466 0.13345427605559043 0.41980869225054157 1.0964548312280837 0.08552801865959866 0.019026387602350658 1.0366665967769481e-11 10.984360894971976 -0.24133279841939181 RQT(ph)TSRPPPAGGR ddPTM_A549_PD325901_60min_R1 3 RQTTSRPPPAGGR 13 2 Q12965;H0YNB0 Q12965 MYO1E Unconventional myosin-Ie 1 RQT(0.92)T(0.04)S(0.04)RPPPAGGR;RQT(0.968)T(0.032)SRPPPAGGR;RQT(0.736)T(0.241)S(0.023)RPPPAGGR 134.76 8.486e-09 80796000.0 1813.27 2107.17 2761.0 2256.29 2252.52 1675.61 1964.42 2438.25 2315.56 2867.48 2741.8199999999997 True False 1997.3518355411784 2284.748611013759 2948.3780632417574 2395.6559088936206 2094.310765972142 1661.9643877067244 2039.1770780718714 2389.6171909798795 2218.245065776809 2686.4268234328033 2404.593521829004 0.8306401133535177 0.950160012606169 1.2261440598904778 0.9962831086192957 0.8709624919804108 0.6911622994154063 0.8480340063965629 0.9937717827511515 0.9225031364509154 1.1172062134599068 1.0 11.231577322689011 -5.262929738518423 9.068858594867512 0.9525323128000265 0.8301411988023363 0.07054263153227991 0.13302147652662397 0.17512165937691251 310.31274092209316 0.017523004474823557 0.13716854884197538 5.4584616259984235e-06 5.262929738518423 -0.1223911139976902 RQTEPVS(ph)PVLKR ddPTM_A549_MK2206_60min_R1 2 RQTEPVSPVLKR 12 2 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 RQT(0.001)EPVS(0.999)PVLKR;RQTEPVS(1)PVLKR 118.2 4.1352e-06 39742000.0 3578.8 3986.7 3703.0 3212.3 4568.2 3624.0 3332.1000000000004 3417.6 5940.6 5137.1 6000.6 True False 4182.813946740575 4189.606001427518 4228.141081593694 3999.3136442056248 3896.2238314579495 4007.4892745834914 3937.499438598981 3902.055265961043 4595.063585188847 3976.625542129101 4510.4854118650555 0.9273533921066403 0.9288592288551808 0.9374026729964273 0.8866703423283959 0.8638147506715662 0.8884829255941261 0.8729657850663243 0.8651076125191521 1.0187514570164233 0.8816402624135288 1.0 12.139066987235083 -8.768108135138345 24.99938021478042 1.0088548631850782 0.8963388594628912 0.19510974061475905 0.04552754609209576 49.754860451674475 186517.22144973755 0.004732331751531458 0.005094879509445111 1.7056576438199442e-09 8.768108135138345 -0.11251600372218706 RQTEPVS(ph)PVLKR ddPTM_A549_PD325901_60min_R1 3 RQTEPVSPVLKR 12 2 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 RQT(0.005)EPVS(0.995)PVLKR;RQT(0.001)EPVS(0.999)PVLKR;RQT(0.021)EPVS(0.979)PVLKR 76.82 0.00023099 57804400.0 6926.4 7353.1 7600.3 8193.5 9466.0 8513.900000000001 8139.900000000001 8444.099999999999 9100.900000000001 8420.8 9294.1 True False 7629.563029053819 7972.771542706696 8116.102062316677 8699.593886211373 8801.140815927178 8444.565621174546 8449.668348824196 8275.675801231699 8718.42082223227 7889.109250897276 8150.984620154114 0.936029619070679 0.9781360061695161 0.9957204485760914 1.0673058889966212 1.0797641298654261 1.036017857314382 1.036643883234862 1.0152976832724323 1.0696156634469798 0.9678719343170732 1.0 12.992758628768144 -5.7795985620556145 2.0517404856176835 1.037739116267934 0.9443605865974839 0.4700655989864806 0.03196497961081466 0.209398572490349 1.6363590022664607 0.004320049720928377 0.024712564905255408 1.6611216475469204e-06 5.7795985620556145 -0.09337852967045002 RQTPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RQTPSPR 7 1 Q14687-2;Q14687-3;Q14687;H0Y613;H7C3B5 Q14687-2 GSE1 Genetic suppressor element 1 1 RQT(0.053)PS(0.947)PR;RQT(0.113)PS(0.887)PR 62.54600000000001 0.021861000000000002 20940800.0 962.68 846.74 728.68 655.5699999999999 712.8499999999999 951.71 806.54 515.89 833.1 760.3199999999999 1112.0 True False 1060.4105649124401 918.0977514342883 778.1326067088029 696.0630699925057 662.7818751989951 943.9595892984449 837.2333210556232 505.60016924212414 798.0877041832904 712.3132654429771 975.2310495487856 1.0873429075120864 0.9414156284903651 0.7978956443899371 0.7137417028657529 0.6796152311861351 0.9679343061679495 0.8584974006344338 0.5184414190627467 0.8183575620900762 0.7304046213177341 1.0 9.929600249199781 -10.428106444582719 1.0464392449972868 0.9884930284534228 0.8160936093223036 0.0 0.16459933245974123 0.6559725463614552 1.3923318978249768 0.07013799535469083 0.026894064009619446 3.7315868624720376e-11 10.428106444582719 -0.17239941913111922 RQYHES(ph)EEES(ph)EEEEAA ddPTM_A549_MK2206_60min_R1 3 RQYHESEEESEEEEAA 16 1 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 2 RQYHES(1)EEES(1)EEEEAA;RQYHES(1)EEES(1)EEEEAA;RQY(0.004)HES(0.998)EEES(0.999)EEEEAA 68.49 0.00048384 39216500.0 1161.92 960.0 963.66 768.62 1170.94 822.42 982.95 805.74 1183.95 1261.27 1167.7 True False 1358.0236897833927 1008.8598995084693 1100.3214784468207 956.9319345046629 998.6962771348383 909.4479385217865 1161.5392914891117 919.9561124752611 915.7872153796476 976.3482310099412 877.7278631194923 1.5472035773786457 1.149399423100147 1.2536020840630702 1.090237617732306 1.1378199543368916 1.0361388497905937 1.323347862469511 1.048110867992372 1.043361221466629 1.1123587071053511 1.0 9.777629895611078 -2.0000000000000004 0.3480110440793113 1.028938713630755 5.8771413822365846 0.5472966585918961 0.10347106769579272 24.748893462589027 0.30462769783414967 0.025311745221711264 79.80248989858084 0.00999999999999999 2.0000000000000004 4.848202668605829 RQYHES(ph)EEES(ph)EEEEAA ddPTM_A549_PD325901_60min_R1 5 RQYHESEEESEEEEAA 16 1 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 2 RQY(0.001)HES(0.999)EEES(1)EEEEAA;RQYHES(1)EEES(1)EEEEAA;RQYHES(1)EEES(1)EEEEAA;RQYHES(1)EEES(1)EEEEAA;RQYHES(1)EEES(1)EEEEAA 80.156 7.4327e-05 74598300.0 2246.73 2396.17 2646.9900000000002 1921.1999999999998 2285.15 1927.54 2488.8 2147.6800000000003 2519.07 2523.06 2856.2599999999998 True False 2474.8163756447925 2598.103655259347 2826.630659043935 2039.8681606382258 2124.648947339532 1911.8427533138506 2583.512645923618 2104.8428375776343 2413.2022482018974 2363.7535610118875 2504.958127323934 0.9879671634625916 1.0371844650492903 1.12841433483906 0.814332239085143 0.8481774302588085 0.7632234377331835 1.0313596134573333 0.8402706674487426 0.9633702942491656 0.9436299693907871 1.0 11.29057077231131 -6.244757783835931 24.99666788078711 0.9413533286061273 1.0497882245974652 0.2891487767402956 0.0899279208870565 1065.2713689664727 1596261.7158526715 0.013581177627998405 0.03582476458939144 5.691702818827665e-07 6.244757783835931 0.10843489599133793 RQYHES(ph)EEESEEEEAA ddPTM_A549_MK2206_60min_R1 1 RQYHESEEESEEEEAA 16 1 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 1 RQYHES(0.996)EEES(0.004)EEEEAA 77.39 0.00017519 1586800.0 157.63 0.0 190.21 176.1 0.0 168.02 157.32 0.0 118.55 247.54 234.84 True False 184.2340903165074 0.0 217.18463816633442 219.24450790542946 0.0 185.79976487735058 185.9030076169359 0.0 91.69861428544891 191.6205420760035 176.52274674572377 1.043684701903555 0.0 1.2303493015502587 1.242018447748523 0.0 1.052554236225375 1.0531391055495196 0.0 0.5194719432818382 1.0855288941998376 1.0 7.463710291133981 -10.942785778582703 1.2894343946907816 0.9944946291225469 0.6623935886941722 0.07549572411569216 0.4726610895319342 1.0469597699005793 3.174198261085647 0.29232838642170206 0.07336878579560357 1.1408123693791014e-11 10.942785778582703 -0.33210104042837474 RRAPS(ph)VANVGSHCDLSLK ddPTM_A549_MK2206_60min_R1 2 RRAPSVANVGSHCDLSLK 18 2 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 RRAPS(0.863)VANVGS(0.137)HCDLSLK;RRAPS(0.825)VANVGS(0.175)HCDLSLK 78.987 6.956699999999999e-05 10967300.0 2955.1 3410.3 3772.1000000000004 3697.2 5185.1 4445.299999999999 4416.700000000001 3061.2 6680.1 5165.0 6214.2 True False 3453.848634741552 3583.8697034309744 4307.040500642608 4603.0141659736155 4422.378658660439 4915.698695448676 5219.1572193091815 3495.1344745318183 5167.06801592769 3998.222912751709 4671.042636804961 0.7394170645173169 0.7672526204732689 0.922072615374084 0.9854361271945319 0.9467647809109679 1.052377183782476 1.1173430912801807 0.748255742088992 1.1061915759908403 0.8559594128403273 1.0 12.189528898634777 -5.695808276154403 0.8392117621747079 1.0311407948915217 0.6414051939394144 0.30915167992781034 0.10945134014786431 0.8153585810133349 0.6113822119295205 0.015165868546266852 0.25398801863315645 2.014613425767419e-06 5.695808276154403 -0.38973560095210724 RRAS(ph)NEKESAAPASPAPSPAPSPTPAPPQK ddPTM_A549_MK2206_60min_R1 2 RRASNEKESAAPASPAPSPAPSPTPAPPQK 30 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 RRAS(0.467)NEKES(0.467)AAPAS(0.064)PAPS(0.001)PAPSPTPAPPQK;RRAS(0.493)NEKES(0.493)AAPAS(0.013)PAPSPAPSPTPAPPQK 67.487 9.4597e-05 16196400.0 738.8199999999999 1476.58 1145.44 659.0200000000001 1381.87 1333.61 1128.6399999999999 999.22 1425.96 1623.5 1657.59 True False 863.5147535852442 1551.7316150168915 1307.8806158521957 820.4799295845318 1178.5987535521203 1474.731725021328 1333.6992786472063 1140.8624949829107 1102.982336790205 1256.7502224302814 1245.9646558433153 0.693049156358922 1.2454058048433339 1.0496931913104497 0.6585097945889968 0.945932734146781 1.183606387312146 1.0704150173060156 0.9156459532238757 0.8852436797604547 1.0086563985072803 1.0 10.283047428816303 -3.6612103830758835 16.67624140537837 0.9601513404030574 0.4524365233137626 0.0 0.17203170956930933 0.0 0.0 0.02120427917972761 0.0 0.00021816727991153125 3.6612103830758835 -0.5077148170892948 RRAS(ph)NEKESAAPASPAPSPAPSPTPAPPQK ddPTM_A549_PD325901_60min_R1 2 RRASNEKESAAPASPAPSPAPSPTPAPPQK 30 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 RRAS(0.962)NEKES(0.038)AAPASPAPSPAPSPTPAPPQK;RRAS(0.49)NEKES(0.49)AAPAS(0.019)PAPSPAPSPTPAPPQK 209.75 1.169e-90 34617000.0 2900.1000000000004 2637.62 3382.3 3266.8999999999996 3795.5 3445.4 3114.5 3309.3999999999996 4103.799999999999 3777.1000000000004 3853.8999999999996 True False 3194.5160170592217 2859.9014941281935 3611.843217422167 3468.688993331783 3528.917173764168 3417.3418047187315 3233.0240018197933 3243.391420825925 3931.331557348918 3538.6132613960826 3379.894731884953 0.9451525181903087 0.8461510552824935 1.0686259496040154 1.0262713097568306 1.0440908530296462 1.0110793606914776 0.9565457679259582 0.9596131471873087 1.163152071057678 1.0469596073551712 1.0 11.722762598580038 -4.716517860274803 0.4381996991698934 1.0626486634672432 0.6854573870316301 0.18217041920875232 0.07008771704317306 7.298418477891757 0.6601678553679974 0.01808243225027032 1.5863154599575056 1.920799967608373e-05 4.716517860274803 -0.3771912764356131 RRAS(ph)PS(ph)PPPK ddPTM_A549_PD325901_60min_R1 1 RRASPSPPPK 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRAS(1)PS(1)PPPK 51.218 0.021189 15809000.0 1642.7 1516.5 1550.3 2055.2 2052.9 1811.0 1771.6 1702.0 1774.7 1988.4 2461.2 True False 1809.465694708176 1644.300777157213 1655.5126807112279 2182.145036302146 1908.711386120526 1796.2518164351366 1839.0192074567187 1668.0522748068304 1700.1155306854937 1862.8520846575339 2158.48800283226 0.8383024099897176 0.7617836073212562 0.7669779394367479 1.0109600022973695 0.8842816747723454 0.8321805884851733 0.851994176036026 0.7727873736699465 0.7876418717429455 0.8630356444942907 1.0 11.075805358789921 -10.835161153726036 1.0700432366618826 1.0004480634405133 0.8325721416021121 0.10846357238562232 0.07780996013590866 0.3980355586620997 0.8056421679661822 0.05008350740235752 0.012187227601438273 1.461634704781424e-11 10.835161153726036 -0.16787592183840117 RRAS(ph)PS(ph)PPPKR ddPTM_A549_PD325901_60min_R1 1 RRASPSPPPKR 11 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRAS(1)PS(1)PPPKR 47.773999999999994 0.010578 33242000.0 4402.9 5012.4 4561.7 4043.6 4720.3 4651.4 4518.3 4360.4 4798.8 5493.1 6079.0 True False 4849.879166756333 5434.812539019327 4871.284393730508 4293.363988318099 4388.762412150966 4613.520540566752 4690.246379008628 4273.428401332372 4597.123124276523 5146.264728541691 5331.321537955995 0.9096954914889179 1.0194118850882534 0.9137104860492313 0.8053095199289284 0.8232034742053089 0.8653615257907621 0.8797530491486445 0.8015701868491664 0.8622858500556768 0.9652887547493048 1.0 12.380277479922915 -10.644922498838081 0.9621726790220716 0.9985640538107919 0.8753689988354241 0.32588885857498784 0.0586442169031513 0.4933616049238861 0.8277894910717566 0.040458686404360907 0.011381725654626983 2.2650484762707437e-11 10.644922498838081 -0.12319505497536787 RRAS(ph)QEANLLTLAQK ddPTM_A549_MK2206_60min_R1 4 RRASQEANLLTLAQK 15 2 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RRAS(1)QEANLLTLAQK;RRAS(1)QEANLLTLAQK;RRAS(1)QEANLLTLAQK;RRAS(1)QEANLLTLAQK 116.29 1.9464999999999999e-07 80021000.0 10383.800000000001 11987.800000000001 10270.0 10983.800000000001 15704.5 11366.199999999999 11780.9 11289.099999999999 19023.399999999998 16081.9 16030.6 True False 12136.33158046406 12597.92781596629 11726.440428832628 13674.831493081518 13394.38885362535 12568.963739727067 13921.337035560393 12889.364496418777 14714.630274127456 12448.987620635382 12049.759597947543 1.0071845402236292 1.045492046008297 0.97316799837484 1.134863428761747 1.111589716354743 1.0430883402742708 1.155320728384626 1.0696781451651738 1.2211555055948025 1.0331316172279355 1.0 13.556716743406461 -6.265077693211898 24.958639843779874 1.1054303057943355 1.012302579448962 0.28047535294115 0.06101584357368093 363.7290670121338 2495169.0561852558 0.01126305963427895 0.027151894651113395 5.431531552910333e-07 6.265077693211898 -0.09312772634537358 RRAS(ph)QEANLLTLAQK ddPTM_A549_PD325901_60min_R1 4 RRASQEANLLTLAQK 15 2 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RRAS(1)QEANLLTLAQK;RRAS(1)QEANLLTLAQK;RRAS(1)QEANLLTLAQK;RRAS(1)QEANLLTLAQK 167.51 1.4158e-27 120660000.0 19919.2 19855.6 22610.2 21905.399999999998 24100.399999999998 22864.7 21371.899999999998 22191.4 24483.5 23981.399999999998 25581.7 True False 21941.382520259984 21528.90109523426 24144.664138177766 23258.446807227043 22407.671045866417 22678.497463967135 22185.219349652416 21748.775118183483 23454.543638664723 22467.21031130868 22435.313075757364 0.9779842361089626 0.9595988708754624 1.0761902032143895 1.036689201915311 0.9987679231487607 1.0108393579081607 0.98885267501013 0.9693992254418003 1.0454297454849737 1.0014217423863714 1.0 14.453483695932377 -8.787026025500793 24.999417078793666 1.0214529257803293 1.004196747067842 0.021130303122207983 0.03285111945717806 587.0544178048491 573577.8737481444 0.006137394383775092 0.006534660965527099 1.6329540886695311e-09 8.787026025500793 -0.017256178712487413 RRAS(ph)SASVPAVGASAEGTR ddPTM_A549_MK2206_60min_R1 2 RRASSASVPAVGASAEGTR 19 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RRAS(0.47)S(0.47)AS(0.061)VPAVGASAEGTR;RRAS(0.941)S(0.058)AS(0.001)VPAVGASAEGTR 92.88600000000001 1.2702e-06 15993800.0 1880.5 1790.1599999999999 1758.21 2032.48 2126.96 1501.59 1742.83 1564.6799999999998 2599.4900000000002 2476.57 2986.0 True False 2197.882426189126 1881.2714976084183 2007.5506160056295 2530.437691241494 1814.087001566874 1660.4872571252279 2059.4796514430745 1786.4781816315315 2010.709665532533 1917.1111169474348 2244.4937905924508 0.9792330169953282 0.8381718432430337 0.894433579821008 1.1273979468544515 0.8082388149926815 0.7398047898751059 0.9175697701081452 0.795938126057358 0.8958410461905495 0.8541396394067987 1.0 11.132174389695287 -10.327982659672049 0.9460815170640658 0.9936450199591002 0.8872557139244862 0.0 0.10661804523521977 0.7637416354317796 1.3261747826116599 0.0472932565078006 0.018405601876338645 4.6991287071469294e-11 10.327982659672049 -0.10638930603461394 RRAS(ph)SASVPAVGASAEGTR ddPTM_A549_PD325901_60min_R1 2 RRASSASVPAVGASAEGTR 19 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RRAS(0.824)S(0.17)AS(0.006)VPAVGASAEGTR;RRAS(0.89)S(0.09)AS(0.02)VPAVGASAEGTR 68.309 0.00047934 17939400.0 3892.6000000000004 4125.1 3514.5 4307.1 4437.6 4244.2 3636.9 4500.2 5110.1 5759.1 4689.3 True False 4287.773886419334 4472.73665403971 3753.015104405347 4573.139784866179 4125.918284888915 4209.636642360023 3775.304219688042 4410.439980661396 4895.340267851436 5395.469443145843 4112.545827921871 1.04260817163611 1.0875834194168357 0.9125770900653525 1.1119972825146736 1.0032516250338785 1.02360844559566 0.9179968753310545 1.0724354609538915 1.1903430314660157 1.3119536338084412 1.0 12.005816040190146 -8.504097905959894 24.70236566027407 1.092068685290366 1.0152971021407668 0.24087228444885478 0.09631337042346373 950.1527153965571 1249733.6467974517 0.013968733579732797 0.016741129397748522 3.1325794460101627e-09 8.504097905959894 -0.0767715831495992 RRASNEKES(ph)AAPASPAPSPAPSPTPAPPQK ddPTM_A549_PD325901_60min_R1 2 RRASNEKESAAPASPAPSPAPSPTPAPPQK 30 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 RRAS(0.176)NEKES(0.809)AAPAS(0.015)PAPSPAPSPTPAPPQK;RRAS(0.455)NEKES(0.544)AAPAS(0.001)PAPSPAPSPTPAPPQK 119.35 1.8735e-21 32946000.0 2079.16 1945.3600000000001 2240.63 2177.95 2724.5 2461.56 2306.8199999999997 2021.6 2186.71 2791.55 3152.5 True False 2290.234792603305 2109.3023144415138 2392.692625802747 2312.477025016668 2533.140519014749 2441.513871487617 2394.6072974403396 1981.2776020854797 2094.810183188864 2615.291056591095 2764.7624853440198 0.8283658378409785 0.762923515355444 0.8654242953911551 0.8364107359221948 0.9162235571565019 0.8830826823027509 0.8661168220178517 0.716617652542746 0.7576817879631372 0.9459369730509325 1.0 11.432939831691858 -10.908254466937208 1.1850048376017157 0.9991310114117046 0.8222242096489712 0.4780647779162681 0.05851194618250051 0.30490286673693945 0.7665605137563328 0.043363469249508166 0.010525456050540555 1.235223464688311e-11 10.908254466937208 -0.17690680176273332 RRDEDMLYS(ph)PELAQR ddPTM_A549_MK2206_60min_R1 10 RRDEDMLYSPELAQR 15 2 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RRDEDMLY(0.063)S(0.937)PELAQR;RRDEDMLY(0.295)S(0.705)PELAQR;RRDEDMLY(0.215)S(0.785)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLY(0.109)S(0.891)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLY(0.004)S(0.996)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLY(0.082)S(0.918)PELAQR;RRDEDMLYS(1)PELAQR 213.44 5.3022e-46 713595000.0 17961.39 19032.74 17521.06 16834.73 26368.79 20993.210000000003 19595.940000000002 20570.090000000004 29154.23 26555.820000000003 28455.58 True False 20992.833518175543 20001.42517059463 20005.80977020471 20959.239605739745 22489.975921524885 23214.697548035034 23156.268644044103 23485.96325075862 22550.843454738635 20556.841818182027 21389.27415194465 0.9814654470762831 0.9351147228516943 0.9353197134268271 0.979894850888813 1.0514604545138415 1.0853429332441569 1.0826112414823952 1.0980252571414792 1.0543061580557833 0.9610817867006983 1.0 14.38459990482203 -6.618828342806437 3.8768056879889774 1.0421765867972212 0.9499494243016299 0.5542969237168498 0.038983477564808376 0.13635758722651214 3.894538016795684 0.005708612036347777 0.012429858647752633 2.405313324972382e-07 6.618828342806437 -0.09222716249559137 RRDEDMLYS(ph)PELAQR ddPTM_A549_PD325901_60min_R1 9 RRDEDMLYSPELAQR 15 2 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RRDEDMLY(0.467)S(0.533)PELAQR;RRDEDMLY(0.463)S(0.537)PELAQR;RRDEDMLY(0.008)S(0.992)PELAQR;RRDEDMLY(0.243)S(0.757)PELAQR;RRDEDMLY(0.003)S(0.997)PELAQR;RRDEDMLY(0.173)S(0.827)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR 122.01 9.221299999999999e-08 881354000.0 16946.969999999998 18076.8 18490.750000000004 17036.79 18829.239999999998 18087.4 16598.01 18315.359999999997 19558.79 20647.12 20392.14 True False 18667.413918700076 19600.195376535106 19745.643488912567 18089.113824942597 17506.739139751608 17940.10221125836 17229.656353329585 17950.045776678027 18736.802073824372 19343.457319540463 17884.03605642607 1.0438031918411685 1.0959604037195165 1.104093249790647 1.0114670853866254 0.9789031449341721 1.003134983325654 0.9634098421054483 1.0036909856390184 1.0476830853341903 1.0816046925039606 1.0 14.126384739197006 -6.272305794545925 23.95201148675811 1.0123080798788817 1.0827530933213165 0.4707667172243676 0.033053491297520325 234.8064194347823 517567.00389081787 0.004284522309973709 0.010062217749952331 5.341880955117842e-07 6.272305794545925 0.07044501344243481 RRDEQLS(ph)PEEEEK ddPTM_A549_MK2206_60min_R1 4 RRDEQLSPEEEEK 13 2 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RRDEQLS(1)PEEEEK;RRDEQLS(1)PEEEEK;RRDEQLS(1)PEEEEK;RRDEQLS(1)PEEEEK 149.73 2.982e-13 61175800.0 2867.88 2878.39 2888.0899999999997 2481.67 3397.3999999999996 3167.34 2846.1099999999997 3064.1499999999996 4220.19 4163.129999999999 4001.49 True False 3351.9080310658196 3024.887756402274 3297.6645898838597 3089.6792614064 2897.6469605085645 3502.5058164898674 3363.211346355436 3498.5026460658178 3264.3237032586144 3222.6760415806416 3007.809597494233 1.1144016675318313 1.005677938830393 1.0963674670867136 1.0272190314108884 0.963374464568022 1.1644705899627954 1.1181596565012903 1.163139664485536 1.0852826940834552 1.0714361854106094 1.0 11.554497528058935 -4.803841371449932 16.43231151414092 1.0576230217056166 96.07600492257524 0.009310046228842683 0.06360227222357553 355.01398398778116 29739.942367165753 0.00920099199241919 8.451068856559882 1.57093649311859e-05 4.803841371449932 95.01838190086961 RRDEQLS(ph)PEEEEK ddPTM_A549_PD325901_60min_R1 4 RRDEQLSPEEEEK 13 2 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RRDEQLS(1)PEEEEK;RRDEQLS(1)PEEEEK;RRDEQLS(1)PEEEEK;RRDEQLS(1)PEEEEK 130.39 1.4128000000000001e-08 93387300.0 5358.4 5422.839999999999 4972.05 5115.4 6051.6 4863.94 5195.95 4730.93 5393.6 4907.3 6349.6 True False 5902.380823354407 5879.841758258635 5309.483212365518 5431.366640083684 5626.556492886641 4824.329685274165 5393.68472058294 4636.567889807212 5166.925748749242 4597.452240514942 5568.639453430731 1.0599322999297547 1.0558848004850052 0.9534614795530438 0.9753489493268457 1.010400572696483 0.8663390269057533 0.9685821403395034 0.8326213123657543 0.9278614268276966 0.8255970383721899 1.0 12.44310917173296 -5.7588223996347265 7.3377147143585795 0.9528602030648997 1.0585778421358998 0.32881905541629164 0.06399851040887018 0.0989878226016043 32.23113285617586 0.007520748531059958 0.026549352493296777 1.742519313476259e-06 5.7588223996347265 0.10571763907100007 RRDEQLS(ph)PEEEEKR ddPTM_A549_PD325901_60min_R1 2 RRDEQLSPEEEEKR 14 3 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RRDEQLS(1)PEEEEKR;RRDEQLS(1)PEEEEKR 74.12 0.00027866 13545900.0 1350.87 1309.1799999999998 1479.74 1421.79 1740.06 1249.32 1389.9 1368.4 1607.66 1713.6100000000001 1856.54 True False 1488.0093279420662 1419.5091931676097 1580.1640547994784 1509.6107391806288 1617.8441884811164 1239.1459521307258 1442.7934050824642 1341.1061885109675 1540.0956409882463 1605.4123721534884 1628.197349576712 0.9138998588401517 0.8718287089317793 0.9704990953401804 0.9271669306998243 0.993641335248281 0.7610539056907757 0.886129316853115 0.8236754524011598 0.9458900307070456 0.9860060100029354 1.0 10.669059860187714 -9.199867747676326 2.1787006644424145 0.9814828703120251 0.8953710399066354 0.2675435795325697 0.061797131771343786 0.2740576090383551 2.6903137967429966 0.012610657705243977 0.0117470913454677 6.311495142756446e-10 9.199867747676326 -0.08611183040538972 RRDPPFQT(ph)PK ddPTM_A549_PD325901_60min_R1 1 RRDPPFQTPK 10 2 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 RRDPPFQT(1)PK 60.157 0.0028141999999999998 6173300.0 914.53 994.18 1055.2 956.54 1255.3 920.29 792.44 1095.1 1178.9 1032.0 1337.8 True False 1007.3724123585974 1077.9630376750126 1126.812217433069 1015.623303340042 1167.1320585499034 912.7954633611765 822.5967378398063 1073.2573714106697 1129.3549327351825 966.8393438777781 1173.259081012919 0.858610368895585 0.9187766411697971 0.960412099653428 0.8656428232911829 0.9947777753761547 0.7779999133466119 0.7011211344127227 0.9147658763349064 0.9625793237075715 0.8240629538047718 1.0 10.196305911515886 -8.709430030447557 3.5894972763617305 0.983165424153666 0.8714158872357483 0.0 0.090302014703581 0.22352771138460528 5.844754820874798 0.014023264045128441 0.0155846089320034 1.9524052623739412e-09 8.709430030447557 -0.11174953691791778 RRDS(ph)DGVDGFEAEGK ddPTM_A549_MK2206_60min_R1 6 RRDSDGVDGFEAEGK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK 153.25 2.3386999999999995e-15 1233271200.0 33982.8 35000.299999999996 31936.399999999998 31420.300000000003 48398.3 38619.7 35175.9 37405.6 54601.50000000001 49360.200000000004 49584.600000000006 True False 39718.265840308384 36781.66577163156 36465.46174404777 39118.27491051089 41278.97418284036 42706.41102031791 41566.90570577531 42707.958349845634 42234.347430678565 38209.69653785226 37271.37535465858 1.065650662535692 0.9868609736462057 0.9783771432381532 1.0495527610204345 1.1075248442014058 1.1458233192078864 1.1152501164832875 1.1458648344327205 1.1331577391173373 1.02517538390427 1.0 15.185780436628958 -6.507806389392122 5.632344889341192 1.0835188076031181 1.0084222669708396 0.35419588135237756 0.0494059831151907 0.20646223978195224 22.062328080280643 0.009047531082683217 0.020354232118191557 3.10594392455273e-07 6.507806389392122 -0.07509654063227855 RRDS(ph)DGVDGFEAEGK ddPTM_A549_PD325901_60min_R1 6 RRDSDGVDGFEAEGK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK 222.24 1.9071e-54 1709133300.0 34578.350000000006 37839.270000000004 37662.6 37299.0 42367.2 35822.899999999994 37763.99999999999 38556.28 40253.7 41788.1 46731.899999999994 True False 38088.71863676414 41028.11807982961 40218.610519612106 39602.87451782491 39391.47403090533 35531.17017944461 39201.12968525373 37787.24474858347 38561.97697501247 39149.592234398224 40984.17255792168 0.9293519000032151 1.0010722559262561 0.9813205442362505 0.9662967932768528 0.9611386926315167 0.8669485794602659 0.9564943547378434 0.9219960387190912 0.9408992439828815 0.9552368583035146 1.0 15.322779250725835 -10.681521326360789 0.9925894127515208 0.9993730128640388 0.948027642258029 0.04864522595955556 0.03559969663196933 0.6264214876572005 1.1178312103079988 0.021961304029465292 0.0060843164325031845 2.0819901649995624e-11 10.681521326360789 -0.051345370606009744 RRDS(ph)DGVDGFEAEGKK ddPTM_A549_MK2206_60min_R1 4 RRDSDGVDGFEAEGKK 16 3 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK 120.41 1.7595e-08 961918000.0 15750.6 17972.3 16018.9 14709.099999999999 24861.8 17566.699999999997 16710.399999999998 17166.1 27275.1 26792.3 27657.300000000003 True False 18408.91621480164 18887.013304100066 18290.62089439406 18312.830160316582 21204.662154227306 19425.59653416828 19746.46337707885 19599.44724397645 21097.33339938464 20739.90082193952 20789.229107351835 0.8855025898142405 0.9084999355469571 0.8798123682193595 0.8808806745912715 1.0199830905095253 0.934406775444053 0.9498410583245617 0.9427693130307254 1.014820380805936 0.9976272191163225 1.0 14.343548641660087 -7.1044160578434745 0.4424883693461386 1.008987675297343 0.8697251034129263 0.5794950839779507 0.03365666884520322 0.6772843460964382 0.22450254149317256 0.009680175239392888 0.03879334420382565 7.862921541215733e-08 7.1044160578434745 -0.1392625718844167 RRDS(ph)DGVDGFEAEGKK ddPTM_A549_PD325901_60min_R1 4 RRDSDGVDGFEAEGKK 16 3 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK 185.92 1.1470999999999998e-34 1351128000.0 27133.200000000004 28279.500000000004 30378.9 27616.199999999997 30687.9 32957.700000000004 28629.300000000003 32453.7 34127.8 36129.8 40263.0 True False 29887.742489593868 30662.712711913897 32440.594837165896 29321.989953059216 28532.487771507665 32689.3034182906 29718.803678054086 31806.38549406488 32693.527248621413 33848.558262049744 35310.90624818594 0.8464167495312959 0.8683637994561287 0.9187131762961337 0.8303947156430063 0.8080361226348728 0.9257565690478415 0.8416324256639791 0.900752455077499 0.9258761873408732 0.9585865065071413 1.0 15.107826227636085 -9.350526447951424 0.5411975777467386 0.9964489031958599 0.8586631605451602 0.6088969170700496 0.035366581089045245 0.30563468542248184 0.2047622624450086 0.016269373259039727 0.0099454657071212 4.4614245427660563e-10 9.350526447951424 -0.13778574265069965 RRDS(ph)DYKR ddPTM_A549_MK2206_60min_R1 2 RRDSDYKR 8 3 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3;F8WE23 P52756 RBM5 RNA-binding protein 5 1 RRDS(1)DYKR;RRDS(1)DYKR 80.102 0.0011698000000000001 31118000.0 4691.200000000001 4986.2 4452.6 3582.7 5850.8 4680.0 4696.6 4773.9 6245.5 6806.3 7567.9 True False 5482.959871171727 5239.9762822178445 5084.045633244423 4460.461660833516 4990.155070507894 5175.234493667423 5549.911426224899 5450.6149444555895 4830.904222014097 5268.752102819354 5688.581566585605 0.9638536086707998 0.921139342186312 0.8937281770042306 0.7841078850014223 0.8772230848933894 0.9097583348486109 0.9756230725115648 0.958167669858543 0.84922825935916 0.9261978651704135 1.0 12.473853249679046 -7.522196693922003 24.59698120530806 0.9332832594415318 0.8853056508004878 0.17753446491037905 0.05377525006957576 38.79193014862947 1398982.7301074325 0.01051473080114742 0.015705705275881006 3.004715145425787e-08 7.522196693922003 -0.047977608641043945 RRDS(ph)DYKR ddPTM_A549_PD325901_60min_R1 2 RRDSDYKR 8 3 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3;F8WE23 P52756 RBM5 RNA-binding protein 5 1 RRDS(1)DYKR;RRDS(1)DYKR 91.65799999999999 0.00076727 83895000.0 6398.5 5867.700000000001 6434.6 5929.3 7713.0 7204.8 7489.200000000001 7792.6 7161.6 7711.6 8226.2 True False 7048.07100967326 6362.191671694941 6871.290650393131 6295.539394582673 7171.265488405487 7146.126497543824 7774.205604247493 7637.170479823566 6860.6228571348565 7224.688259930107 7214.429550178255 0.9769408600710662 0.8818703720708927 0.9524371404005676 0.8726316267690384 0.9940169820118763 0.9905324388907861 1.0775911733804937 1.0585965843460021 0.9509584658658623 1.0014219710207855 1.0 12.816669609016115 -6.787997690609948 24.889737681395857 0.992426631654855 0.9204248256061766 0.45730743464026824 0.044194764125244465 180.69625559487395 169343.26269058092 0.006943825575035214 0.013125328052984025 1.6293046965537506e-07 6.787997690609948 -0.07200180604867845 RRDS(ph)EEFGVK ddPTM_A549_MK2206_60min_R1 2 RRDSEEFGVK 10 2 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 RRDS(1)EEFGVK;RRDS(1)EEFGVK 127.02 7.656999999999999e-07 29784000.0 5870.5 5884.799999999999 5529.4 5357.799999999999 7815.7 6041.700000000001 6436.9 5789.1 8051.9 8726.7 9340.3 True False 6861.296880054918 6184.311183986922 6313.552064964667 6670.461240520778 6666.020883395183 6681.02868384412 7606.40140941682 6609.722653375201 6228.157506242149 6755.332409043632 7020.845730834113 0.9772749812635123 0.8808498891845318 0.8992580533762253 0.9500936918789544 0.9494612385683662 0.9515988443532398 1.0834024419609545 0.9414425137340159 0.8870950516530166 0.9621821455747986 1.0 12.77742911265472 -6.375697967511277 5.587657214464093 0.9559525402609638 0.9155000231980374 0.12174669116225756 0.0509248131153666 0.4693904769375726 19.940989375770446 0.008370009920886424 0.019738159284824076 4.21019326802297e-07 6.375697967511277 -0.04045251706292641 RRDS(ph)EEFGVK ddPTM_A549_PD325901_60min_R1 2 RRDSEEFGVK 10 2 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 RRDS(1)EEFGVK;RRDS(1)EEFGVK 139.78 4.7054e-08 36274000.0 7225.9 6911.299999999999 7160.1 7713.5 8001.400000000001 7219.6 6064.1 7762.9 8490.1 8075.2 8852.5 True False 7959.46804857357 7493.739506209461 7646.027443179035 8189.9453763704705 7439.409267331477 7160.805971250748 6294.872643902844 7608.062869622763 8133.290622118055 7565.330493877746 7763.698620621066 1.0252160004553144 0.9652280275673544 0.9848434125032255 1.0549025376406622 0.9582300435480265 0.9223446608593253 0.8108084756385454 0.9799534012584001 1.047605145376885 0.97444927521833 1.0 12.922528399754553 -8.542994375424351 14.71827628871742 1.022025095119541 0.958609937982475 0.08945058810305284 0.06105446053019093 2.9958015047120763 2190.1991196070207 0.010735735360149762 0.012185846987282152 2.8642150642991047e-09 8.542994375424351 -0.06341515713706614 RRDS(ph)SEHGAGGHR ddPTM_A549_PD325901_60min_R1 1 RRDSSEHGAGGHR 13 2 O14641;I3L2N2 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 1 RRDS(0.5)S(0.5)EHGAGGHR 46.408 0.0076449 1109500.0 0.0 0.0 0.0 0.0 0.0 119.51 0.0 113.37 105.95 116.9 181.54 True False 0.0 0.0 0.0 0.0 0.0 118.53675018341423 0.0 111.10874641295554 101.49728995104977 109.51891404972119 159.21173087687643 0.0 0.0 0.0 0.0 0.0 0.744522715321037 0.0 0.6978678380105013 0.6374988161490494 0.6878821896259372 1.0 7.31480282876174 -8.425999231784385 0.4698430450431635 0.9542651293587974 9.374621179568003e-24 0.6810565863911331 0.21742173659425829 0.2973511810679349 0.15466872406428558 0.0738344752341649 0.09207378160267093 3.749736655289984e-09 8.425999231784385 -0.9542651293587974 RRDS(ph)SHNELYYEEAEHER ddPTM_A549_MK2206_60min_R1 2 RRDSSHNELYYEEAEHER 18 2 Q8TAA9-2;Q8TAA9 Q8TAA9-2 VANGL1 Vang-like protein 1 1 RRDS(0.5)S(0.5)HNELYYEEAEHER;RRDS(0.5)S(0.5)HNELYYEEAEHER 97.97399999999999 3.4506999999999995e-07 12327100.0 361.41999999999996 472.01 332.52 302.23 563.3399999999999 185.1 90.40100000000001 275.92 597.1800000000001 459.16999999999996 453.56 True False 422.4188601293668 496.0332928822842 379.67633606576715 376.2763635676202 480.47343225198523 204.68715914056418 106.8256915305023 315.0325049695608 461.9196835005009 355.44317809258536 340.92853438081465 1.2390246562862588 1.4549480106825516 1.1136537361277936 1.103681052250447 1.4093083558541333 0.60038142454785 0.3133374908747849 0.924042645892678 1.3548871300533034 1.0425738600558379 1.0 8.413325542220946 -6.066677385280265 1.436245622893684 1.0594810151611547 1.347908394244394 0.13013324856337272 0.3070147564637516 1.0048320688412904 3.670697511074912 0.05206981658615347 0.2671058346151109 8.576747304714315e-07 6.066677385280265 0.28842737908323923 RRDS(ph)SHNELYYEEAEHER ddPTM_A549_PD325901_60min_R1 1 RRDSSHNELYYEEAEHER 18 2 Q8TAA9-2;Q8TAA9 Q8TAA9-2 VANGL1 Vang-like protein 1 1 RRDS(0.5)S(0.5)HNELYYEEAEHER 86.76100000000001 2.3237e-06 7566300.0 258.68 227.3 146.15 140.21 236.99 241.56 174.29 234.88 282.96 359.24 245.15 True False 284.9410031698489 246.45536870941945 156.06861787134486 148.8704532599863 220.34463997111578 239.59281544896268 180.9227013251475 230.19513414020454 271.06817521990587 336.55752509171805 214.99810413388929 1.3253186781237984 1.1463141486863544 0.7259069492731606 0.6924268186443067 1.0248678278292955 1.114395014849792 0.8415083568015025 1.070684483788989 1.2607933279779022 1.5653976412839812 1.0 7.748180127874598 -8.512359182054547 24.15806777416063 1.1253937985550349 0.9724398847515495 0.16782323091657825 0.2259614890985641 571.4108074966575 1312241.1488591149 0.03351860302680583 0.03923282256357982 3.0735537890924796e-09 8.512359182054547 -0.15295391380348533 RRDS(ph)YYDR ddPTM_A549_MK2206_60min_R1 1 RRDSYYDR 8 2 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RRDS(0.993)Y(0.005)Y(0.002)DR 41.398999999999994 0.018359 9032300.0 130.53 164.32 0.0 87.348 184.78 143.48 118.78 217.69 143.19 170.33 124.14 True False 152.56027284789508 172.68318613253308 0.0 108.7482639212007 157.59910677658584 158.66295836568415 140.3607884867763 248.54822414766488 110.75769362744359 131.8523347006774 93.31261191029701 1.634937332957241 1.850587852996081 0.0 1.1654187113071302 1.6889368280473012 1.700337769113242 1.5041995461632507 2.663608048894811 1.186953096264381 1.4130172974627404 1.0 6.544000180367187 -8.980280927787177 24.994959165400143 1.0824786881640205 1.5120036231492295 0.04707116412821699 0.6064138481990173 244.14819089139243 309474.8957533684 0.10886818219851327 0.11091562618982925 1.0464514213637253e-09 8.980280927787177 0.42952493498520905 RRDS(ph)YYDR ddPTM_A549_PD325901_60min_R1 1 RRDSYYDR 8 2 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RRDS(0.995)Y(0.004)YDR 48.284 0.007351899999999999 19201000.0 0.0 119.23 106.51 143.49 270.67 138.11 76.089 105.57 122.8 147.7 199.84 True False 0.0 129.27793053772137 113.73840909666058 152.35305141056577 251.659072960808 136.98527795022454 78.98460853249841 103.46432353193714 117.63914304850317 138.37419679336028 175.2609468901344 0.0 0.7376311313595816 0.6489660766694341 0.8692926411385369 1.4359107229893333 0.7816075422444017 0.4506686169053474 0.5903444285097678 0.6712227974110369 0.7895324043872862 1.0 7.453360748309508 -5.294248860230639 3.930432899709445 0.8222501386219395 5.040924811695151e-24 0.4662692708846431 0.24499623122152514 0.159402289085128 4.804631848920456 0.0361317180591083 0.34978079811648266 5.078683395051475e-06 5.294248860230639 -0.8222501386219395 RRDSS(ph)HNELYYEEAEHER ddPTM_A549_PD325901_60min_R1 1 RRDSSHNELYYEEAEHER 18 2 Q8TAA9-2;Q8TAA9 Q8TAA9-2 VANGL1 Vang-like protein 1 1 RRDS(0.409)S(0.591)HNELYYEEAEHER 109.85 7.1158e-10 6861700.0 224.96 169.93 249.29 263.07 367.71 265.5 176.9 280.68 137.79 327.14 161.92 True False 247.79777359320096 184.25059746938686 266.20831850254905 279.3192364246814 341.88331813063434 263.3378560262443 183.6320263033943 275.0816172107996 131.99916547763232 306.4843245699381 142.0048664954491 1.7449949407272056 1.297494952226103 1.874642222286659 1.9669694660332844 2.4075464916661207 1.8544283905557815 1.2931389665387223 1.9371280998994163 0.9295397315264724 2.158266347722387 1.0 7.14979656139586 -8.765908046125203 24.99979186409124 0.9667270337978191 1.7941083937031235 0.0 0.4630952878980022 54.00658072171766 302137.0556063638 0.05253469317685007 0.05686097830786636 1.7143202448893748e-09 8.765908046125203 0.8273813599053044 RRDT(ph)FYKEQLER ddPTM_A549_MK2206_60min_R1 2 RRDTFYKEQLER 12 3 J3QTA6;Q9BRQ6;H0Y922 J3QTA6 CHCHD6 MICOS complex subunit MIC25 1 RRDT(1)FYKEQLER;RRDT(1)FYKEQLER 81.632 0.00031882 28647000.0 2489.7 2630.5 2708.9 2493.0 4609.9 3800.6000000000004 2813.1 3624.7000000000003 4388.7 3804.3 4405.0 True False 2909.9004926791117 2764.3812142260736 3093.062753424025 3103.785111915023 3931.789816697601 4202.776969365901 3324.2038566437973 4138.512325178196 3394.6664573137878 2944.905987798901 3311.116928184778 0.8788274639018498 0.8348787657407085 0.9341448280172048 0.9373831185166215 1.187451214189856 1.2692928279249713 1.003952421114344 1.249884076865571 1.0252330349368886 0.8893995747269967 1.0 11.693102243368521 -6.561882621470582 9.82589779137666 1.0599509273517722 0.8874031872728962 0.3969460538462116 0.11208662984037154 0.33111631489405036 80.59795752802539 0.015815502303456134 0.03299752465487216 2.742315248430756e-07 6.561882621470582 -0.17254774007887597 RRDT(ph)FYKEQLER ddPTM_A549_PD325901_60min_R1 2 RRDTFYKEQLER 12 3 J3QTA6;Q9BRQ6;H0Y922 J3QTA6 CHCHD6 MICOS complex subunit MIC25 1 RRDT(1)FYKEQLER;RRDT(1)FYKEQLER 83.96600000000001 0.00023118 29262000.0 3738.5 4214.299999999999 4347.9 4143.799999999999 4620.0 5416.4 4640.0 4973.5 5271.2 5591.2 5561.3 True False 4118.02976786176 4569.453851087134 4642.974640046666 4399.753114747387 4295.5071381347525 5372.290634201697 4816.577739105425 4874.299640864727 5049.669795091774 5238.170677799841 4877.295355985307 0.844326510349267 0.9368827429078298 0.9519568328682232 0.9020887179506383 0.8807149915297632 1.1014897073249712 0.9875509657611016 0.9993857835333053 1.035342218694001 1.0739908690113826 1.0 12.251865625441248 -7.242092311797446 24.978991809602757 1.0185078363631344 0.907713199507084 0.6956330154776649 0.042104905662483594 366.5899504555858 473304.35190360976 0.005494736093269745 0.009507430169690068 5.7267429282368346e-08 7.242092311797446 -0.1107946368560504 RRDT(ph)LAIK ddPTM_A549_PD325901_60min_R1 1 RRDTLAIK 8 2 J3KP75;O75167-5;O75167-2;O75167;O75167-4 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 RRDT(1)LAIK 50.292 0.059099 4248200.0 1255.2 1256.6 1260.6 1524.5 1504.0 1786.4 1523.0 1551.6 1464.7 1229.6 1893.4 True False 1382.6269799705976 1362.4980920380829 1346.1518966036085 1618.664902609293 1398.3642285183266 1771.8521506790323 1580.958598417578 1520.6521207933467 1403.1437526314542 1151.9628461551504 1660.523803251504 0.8326450829932391 0.8205230719187215 0.8106790724515254 0.9747917491093797 0.8421223627027583 1.0670441141581555 0.952084273240692 0.915766529703295 0.8450006858582401 0.6937346178955517 1.0 10.697422688373992 -6.2512448074429745 24.581120502628156 0.932901012658642 0.8212064638479396 0.12432952970626698 0.09454340092239909 514.7718897122097 1241212.6487739685 0.00997773440462687 0.02605536286666358 5.607318080350751e-07 6.2512448074429745 -0.1116945488107024 RREDEEEELRER ddPTM_A549_PD325901_60min_R1 1 RREDEEEELRER 12 3 A0A0U1RQE4 A0A0U1RQE4 0 38.021 0.037872 3392400.0 0.0 199.22 0.0 0.0 0.0 99.654 0.0 141.7 0.0 0.0 0.0 False True 0.0 216.0089685626508 0.0 0.0 0.0 98.84245086417839 0.0 138.87368233850043 0.0 0.0 0.0 0.0 RREDQMDGDGPRPR ddPTM_A549_MK2206_60min_R1 1 RREDQMDGDGPRPR 14 3 Q15527 Q15527 SURF2 Surfeit locus protein 2 0 41.644 0.017077000000000002 6208600.0 201.63 123.09 170.41 0.0 0.0 0.0 0.0 106.6 0.0 141.28 242.32 False True 235.6602146197893 129.35475524010158 194.57670043596585 0.0 0.0 0.0 0.0 121.71087644880834 0.0 109.3647498767786 182.14525630822598 1.2938037443094612 0.7101736156181175 1.0682501668157824 0.0 0.0 0.0 0.0 0.6682077750235194 0.0 0.6004260121477537 1.0 7.508945612581393 -6.241246877728539 24.451187967055812 0.3870148368215199 0.9926857265729837 0.43730621450518714 0.3599826186054212 681.4462986684277 825164.3262754831 0.06462589169714196 0.17073006920274927 5.73790194441853e-07 6.241246877728539 0.6056708897514638 RREDQMDGDGPRPR ddPTM_A549_PD325901_60min_R1 1 RREDQMDGDGPRPR 14 3 Q15527 Q15527 SURF2 Surfeit locus protein 2 0 49.928999999999995 0.0075951000000000005 2645600.0 191.21 297.93 270.22 246.52 410.01 175.62 187.12 223.53 311.71 276.87 324.25 False True 210.62149843863773 323.0376066854261 288.55875416486356 261.74698051245855 381.212312057712 174.18980894662542 194.24095399599292 219.07151879410733 298.6099127007241 259.38838094907004 284.3693055901024 0.7406618587107051 1.1359791662995486 1.0147324218627167 0.9204473737743964 1.3405536552781183 0.6125478577413953 0.6830587907260888 0.7703768110257404 1.0500778629432972 0.9121532312033686 1.0 8.151621940727974 -4.37806243190443 15.814237494975687 0.9710953515064839 0.9458308458739584 0.0 0.20967774066884048 0.0 0.0 0.026801826787665677 0.0 4.187333658713217e-05 4.37806243190443 -0.02526450563252547 RREDS(ph)YHVR ddPTM_A549_MK2206_60min_R1 1 RREDSYHVR 9 2 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 RREDS(0.925)Y(0.075)HVR 48.004 0.0068263 25714000.0 0.0 0.0 0.0 0.0 99.945 148.73 0.0 114.57 113.74 159.47 0.0 True False 0.0 0.0 0.0 0.0 85.2432228963409 164.46850988101625 0.0 130.81064835590968 87.97807160545729 123.44561624327493 0.0 0.0 RREDS(ph)YHVR ddPTM_A549_PD325901_60min_R1 3 RREDSYHVR 9 2 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 RREDS(0.998)Y(0.002)HVR;RREDS(0.989)Y(0.011)HVR;RREDS(0.684)Y(0.316)HVR 64.439 0.0012887 69008000.0 2536.1389999999997 2359.56 2249.82 2046.6000000000001 1773.27 1387.2 3591.7909999999997 1478.21 1842.9099999999999 2348.08 4212.86 True False 2793.6059642731443 2558.40840207654 2402.506314466707 2173.0138338341635 1648.7216326493979 1375.903103124694 3728.4785720084506 1448.725941916689 1765.4589015921574 2199.8218280741607 3694.7049275198747 0.7561107095359828 0.6924526998138142 0.6502566136125585 0.5881427276231315 0.44623905426627036 0.37239864349554147 1.0091410938494747 0.39210869889119065 0.4778348843075942 0.5953985152342933 1.0 11.851243434797443 -10.84354171876564 1.0653782386908448 1.0023702004048765 0.5899522905933403 0.0 0.21029276386856077 0.39928960713344563 0.7971807154125272 0.12370638833498543 0.029616279640489303 1.4336999867750067e-11 10.84354171876564 -0.41241790981153614 RREEEER ddPTM_A549_PD325901_60min_R1 1 RREEEER 7 2 Q6Y7W6;Q6Y7W6-3;I1E4Y6;Q9HCE9-2;Q9HCE9;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;O95232;H0YA81;J3KPP4;P48634;P48634-2;P48634-3;P48634-4;Q96KR1;E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;A0A0A0MS30;Q5JSZ5;Q5JSZ5-5;Q5JT00;Q9H3P7 Q6Y7W6;Q6Y7W6-4;O95232;P48634;Q96KR1;E7EPN9;Q5JSZ5;Q9H3P7 GIGYF2;ANO8;LUC7L3;PRRC2A;ZFR;PRRC2C;PRRC2B;ACBD3 PERQ amino acid-rich with GYF domain-containing protein 2;Anoctamin-8;Luc7-like protein 3;Protein PRRC2A;Zinc finger RNA-binding protein;Protein PRRC2C;Protein PRRC2B;Golgi resident protein GCP60 0 107.29 0.0045674 9620100.0 2284.3 2384.7 1465.3 1870.3 2210.1 1495.5 1610.9 1865.6 1555.7 2435.9 2900.5 False True 2516.200454387221 2585.6670381053773 1564.7440695647038 1985.824183240513 2054.8702004310853 1483.3211438314445 1672.2036810183035 1828.3891444651117 1490.3193390924796 2282.096858286706 2543.7568877844014 0.9891670334026369 1.0164756901582208 0.615131138151959 0.7806658697522605 0.8078091936768635 0.5831222122501688 0.6573755884646603 0.718775113001317 0.5858733380730183 0.8971363848667158 1.0 11.312745080462179 -5.740363761261948 24.810774220111547 0.7597017572495649 1.0028216484952464 0.38772388068560526 0.12584305854125719 239.19209566395432 281578.3107293188 0.022672417234759712 0.08762255608662448 1.8181773312121932e-06 5.740363761261948 0.24311989124568145 RREEEGLQLR ddPTM_A549_MK2206_60min_R1 2 RREEEGLQLR 10 2 C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294 C9J352 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed 0 ; 117.67 2.3893000000000003e-05 7879200.0 368.39 323.95000000000005 199.09 106.31 456.17 480.41999999999996 332.32 421.15999999999997 343.01 385.15999999999997 340.02 False True 430.56522572922745 340.43767129767605 227.3239556938937 132.3559547724373 389.06799728474516 531.2577255230136 392.69824238024506 480.8607197484065 265.31878267441465 298.1520884947624 255.58364992540032 1.6846352489875651 1.3320009765767211 0.8894307431646936 0.5178576752114985 1.5222726391078076 2.0786060676341265 1.536476384521724 1.8814220701862578 1.038089810329635 1.1665538409119165 1.0 7.997651737616703 -8.950314801605499 24.998919417894186 1.0168032933278426 1.4101335242546296 0.12841663178957186 0.4121955825102597 158.12559763549044 79560.37861980798 0.07671609517144831 0.08165820082356265 1.1212054455214422e-09 8.950314801605499 0.393330230926787 RREEEGLQLR ddPTM_A549_PD325901_60min_R1 1 RREEEGLQLR 10 2 C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294 C9J352 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed 0 55.567 0.0056398 4196900.0 405.52 220.23 208.58 353.25 471.07 379.44 334.36 428.41 282.82 411.78 500.19 False True 446.6880918719541 238.78955499725222 222.73549309343218 375.0694502110418 437.9836683032767 376.34996644293113 347.08425276881246 419.8650264688567 270.934058933043 385.7801405251856 438.66980096565425 1.0182786480597683 0.5443491994926459 0.5077520554255599 0.8550154338990112 0.998435878966669 0.8579345229930645 0.7912198469207765 0.9571322793239877 0.6176264204570941 0.879431726724654 1.0 8.776991581117699 -11.106853348627219 1.4542562821319418 0.9997817647576648 0.769588121534802 0.07081357786566 0.1704193198945081 0.5674823819406762 2.149398597693573 0.1254724611147398 0.02738548055754281 7.818917870954378e-12 11.106853348627219 -0.23019364322286273 RREEGPPPPS(ph)PDGASS(ph)DAEPEPPSGR ddPTM_A549_MK2206_60min_R1 4 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 2 RREEGPPPPS(1)PDGAS(0.229)S(0.771)DAEPEPPSGR;RREEGPPPPS(0.999)PDGAS(0.256)S(0.745)DAEPEPPSGR;RREEGPPPPS(0.999)PDGAS(0.12)S(0.88)DAEPEPPSGR;RREEGPPPPS(1)PDGAS(0.189)S(0.81)DAEPEPPS(0.001)GR 145.86 2.1671e-32 96749000.0 4062.36 3897.17 3355.83 3686.81 5991.54 3930.4199999999996 3551.39 3828.22 5747.84 5692.639999999999 6236.46 True False 4747.98705283364 4095.5193068410676 3831.737155237528 4590.07861550719 5110.192402945044 4346.334435598359 4196.631593063247 4370.881908432055 4445.963417414381 4406.668670289816 4687.774864460211 1.0128445136795967 0.8736595560274757 0.8173893299115904 0.9791593556052163 1.0901104576688057 0.9271636461361572 0.8952289123096534 0.9324001332848467 0.9484165826991622 0.9400341948369648 1.0 12.194687569071109 -8.141101360610781 0.00895348663285675 1.903002330857777 8.274245292529082e-07 0.0 0.07063764929022524 2668.6332452816796 15.42359857369668 1622.3815622594138 1654.3412811027877 7.226011350068019e-09 8.141101360610781 -1.9030015034332477 RREEGPPPPS(ph)PDGASS(ph)DAEPEPPSGR ddPTM_A549_PD325901_60min_R1 4 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 2 RREEGPPPPS(0.999)PDGAS(0.203)S(0.798)DAEPEPPSGR;RREEGPPPPS(1)PDGAS(0.014)S(0.932)DAEPEPPS(0.054)GR;RREEGPPPPS(1)PDGAS(0.268)S(0.727)DAEPEPPS(0.006)GR;RREEGPPPPS(1)PDGAS(0.186)S(0.814)DAEPEPPSGR 175.28 2.6694e-48 142418000.0 7148.29 6644.86 6601.099999999999 6294.65 7350.0 7188.53 8464.21 7501.8099999999995 8662.29 8572.66 8773.3 True False 7873.979138507032 7204.845672338196 7049.090341638962 6683.456234312617 6833.761356123469 7129.988995029524 8786.32014334343 7352.180514493904 8298.244075224911 8031.380784580693 7694.239718530906 1.0233602573550236 0.9363947493065432 0.9161516406438237 0.8686311421018109 0.8881659015204517 0.9266658248062594 1.1419348063957955 0.9555434693289862 1.0785008498291668 1.0438173332756726 1.0 12.909563063003173 -7.634271419440033 12.219264980319196 1.037737481159032 0.9217158048824335 0.5139173235687144 0.05661521587811152 0.28655224033942617 29.921268231151608 0.008732196828640446 0.012952275831401258 2.3212856175204286e-08 7.634271419440033 -0.11602167627659854 RREEGPPPPSPDGAS(ph)SDAEPEPPSGR ddPTM_A549_MK2206_60min_R1 2 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPS(0.002)PDGAS(0.499)S(0.499)DAEPEPPSGR;RREEGPPPPS(0.004)PDGAS(0.498)S(0.498)DAEPEPPSGR 85.866 1.8550999999999997e-07 15062000.0 1318.72 1387.2 1731.2199999999998 1778.12 1175.27 1077.72 804.13 855.8399999999999 1683.84 1950.4299999999998 2089.55 True False 1541.2876963914525 1457.8025547897387 1976.7330281600423 2213.759479822841 1002.3893398707546 1191.7636150673625 950.2300121726843 977.1579409000764 1302.452928539944 1509.8265083675346 1570.6570663538032 0.9813012206219337 0.9281482164492786 1.2585389073815603 1.4094480120743136 0.6381974533739234 0.7587675505984118 0.604988849907633 0.6221332217149709 0.8292408040181038 0.9612706304327249 1.0 10.617152504964512 -6.769662947788376 24.99996935362842 0.8420093446939633 1.1370711716965403 0.4758448736705516 0.1781717751914946 164.93280452910855 501403.53507771343 0.029525192194398378 0.056478723633391 1.6995621563257797e-07 6.769662947788376 0.295061827002577 RREEGPPPPSPDGAS(ph)SDAEPEPPSGR ddPTM_A549_PD325901_60min_R1 6 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPSPDGAS(0.52)S(0.48)DAEPEPPSGR;RREEGPPPPSPDGAS(0.5)S(0.5)DAEPEPPSGR;RREEGPPPPS(0.003)PDGAS(0.499)S(0.499)DAEPEPPSGR;RREEGPPPPS(0.054)PDGAS(0.473)S(0.473)DAEPEPPSGR;RREEGPPPPS(0.004)PDGAS(0.498)S(0.498)DAEPEPPS(0.001)GR;RREEGPPPPS(0.001)PDGAS(0.5)S(0.5)DAEPEPPSGR 220.96 5.0319999999999996e-83 253605200.0 4638.42 6040.93 5258.1 5622.949999999999 6336.53 6099.96 5462.7 5777.54 6388.110000000001 6260.900000000001 6166.990000000001 True False 5109.308983775671 6550.020371745679 5614.946285523899 5970.266850854 5891.473992641776 6050.283948195289 5670.586037804138 5662.302432307552 6119.63995195093 5865.5857055081215 5408.489325770563 0.944683196365139 1.2110628268296488 1.0381727590308079 1.1038695819194206 1.089301214771724 1.1186643041646918 1.048460243932576 1.0469286507283304 1.1314878487033064 1.0845146125295229 1.0 12.401009968073376 -11.002705522485623 1.2587393103369344 0.9995980892189695 1.0889589687923489 0.0 0.06815315457289511 0.5394918601959164 1.5102226091946733 0.04155610643983199 0.009280804605723733 9.937896685782303e-12 11.002705522485623 0.08936087957337935 RREEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_A549_MK2206_60min_R1 5 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPSPDGAS(0.265)S(0.735)DAEPEPPSGR;RREEGPPPPSPDGAS(0.186)S(0.814)DAEPEPPSGR;RREEGPPPPSPDGAS(0.133)S(0.867)DAEPEPPSGR;RREEGPPPPSPDGAS(0.486)S(0.514)DAEPEPPSGR;RREEGPPPPSPDGAS(0.129)S(0.871)DAEPEPPSGR 334.79 1.2355999999999994e-232 534827000.0 10682.55 11255.970000000001 9975.16 9771.48 13308.77 10737.92 9578.15 10031.79 15335.72 14704.100000000002 16118.1 True False 12485.503276727815 11828.850794864946 11389.787683356784 12165.49303865841 11351.067563021008 11874.199567145572 11318.375873418227 11453.82695356839 11862.20390611257 11382.433597559037 12115.530933070388 1.0305370309977548 0.9763377981708649 0.940098105999414 1.0041238065309748 0.9369021981560287 0.9800808262338647 0.9342038690622911 0.9453838231970653 0.9790907201378737 0.9394911094230053 1.0 13.564570008253193 -9.610375549546175 1.313202977264549 0.9952619029196939 0.9676519680497494 0.0 0.03314197021643871 0.5281137056069303 1.8587111155710458 0.007102145652599739 0.005250509710326889 2.4525871610041616e-10 9.610375549546175 -0.027609934869944452 RREEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_A549_PD325901_60min_R1 4 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPSPDGAS(0.223)S(0.777)DAEPEPPSGR;RREEGPPPPSPDGAS(0.104)S(0.896)DAEPEPPSGR;RREEGPPPPSPDGAS(0.101)S(0.899)DAEPEPPSGR;RREEGPPPPSPDGAS(0.191)S(0.809)DAEPEPPSGR 372.98 0.0 423772000.0 9477.9 9872.7 10839.599999999999 9335.0 11461.199999999999 11859.4 9962.3 10755.800000000001 11685.5 11259.5 12735.9 True False 10440.089430738792 10704.70707724367 11575.240439809984 9911.60174867678 10656.204850993508 11762.820978371534 10341.42077807974 10541.267131238137 11194.399072420872 10548.573248441711 11169.465039521932 0.9346991457332715 0.9583903113861078 1.0363289914827845 0.8873837478881629 0.9540479166448609 1.0531230400695177 0.9258653607391001 0.9437575652852679 1.0022323390431604 0.9444116805161874 1.0 13.447272469281979 -8.780157086807682 24.413473866465637 1.0010541686420782 0.9631975879840468 0.0 0.0477531500251091 268.81902303299904 350618.3336252985 0.007441040512199402 0.007929074163340256 1.6589867338739883e-09 8.780157086807682 -0.037856580658031436 RREPES(ph)PPASAPIPLFGADTIGQR ddPTM_A549_MK2206_60min_R1 4 RREPESPPASAPIPLFGADTIGQR 24 2 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 RREPES(0.935)PPAS(0.065)APIPLFGADTIGQR;RREPES(0.999)PPAS(0.001)APIPLFGADTIGQR;RREPES(0.786)PPAS(0.214)APIPLFGADTIGQR;RREPES(0.916)PPAS(0.084)APIPLFGADTIGQR 89.65899999999999 9.691499999999999e-08 62070000.0 3262.98 3094.16 2478.94 2438.99 4106.34 2956.16 3145.44 3431.79 4497.01 4529.35 5124.31 True False 3813.6912517982423 3251.63952777409 2830.4909675414196 3036.542659490421 3502.3028256357034 3268.978889059805 3716.925732765159 3918.2567419160964 3478.444415249318 3506.16668922981 3851.8024032387125 0.9901056317405001 0.8441864839795553 0.7348484348941309 0.7883433108970501 0.909263367895212 0.8486881067188567 0.9649834917907146 1.0172527901798667 0.903069277989062 0.9102664992061167 1.0 11.91131797974908 -7.758960679886137 23.725731772104176 0.9595274755990884 0.8464975915245582 0.37587663750076794 0.06811393148173078 28.47812903730922 272582.9761135193 0.011038064838475926 0.015943532004731142 1.7419645800812433e-08 7.758960679886137 -0.11302988407453018 RREPES(ph)PPASAPIPLFGADTIGQR ddPTM_A549_PD325901_60min_R1 4 RREPESPPASAPIPLFGADTIGQR 24 2 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 RREPES(0.996)PPAS(0.004)APIPLFGADTIGQR;RREPES(0.997)PPAS(0.003)APIPLFGADTIGQR;RREPES(0.995)PPAS(0.005)APIPLFGADTIGQR;RREPES(0.999)PPAS(0.001)APIPLFGADTIGQR 123.24 6.8579e-17 93023000.0 9390.189999999999 9843.93 9160.52 10436.029999999999 10047.55 9683.8 9291.8 9297.58 10497.7 11558.36 12521.0 True False 10343.475176107475 10673.512528375339 9782.20797388171 11080.639871156218 9341.844750165763 9604.938343453658 9645.404533668056 9112.132473089596 10056.51817573511 10828.563177037944 10980.996377158583 0.9419432281776172 0.9719985474703519 0.8908306348438056 1.0090741760196644 0.8507283336872421 0.8746873246796398 0.8783724356499495 0.8298092595717103 0.9158110821941015 0.9861184545659525 1.0 13.422721344927911 -10.288877106167776 0.973132393316801 0.9938564908188876 0.9072613975429702 0.3012197406072663 0.05002915790051699 0.4663780639807958 0.8649148669292309 0.023275976893977687 0.00960032758394854 5.14189132899511e-11 10.288877106167776 -0.08659509327591741 RRES(ph)ASSSSSVK ddPTM_A549_PD325901_60min_R1 2 RRESASSSSSVK 12 2 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 RRES(0.996)AS(0.003)S(0.001)SSSVK;RRES(0.979)AS(0.02)SS(0.001)SSVK 76.85 0.00036834 76607000.0 2895.0 3326.0 3549.3 3004.7 3760.1000000000004 2981.2 3909.3 2779.3 3489.7 4510.0 4319.6 True False 3188.8982688136416 3606.293692598015 3790.176841674747 3190.2934948311854 3496.0035476407966 2956.92209561371 4058.0705507510434 2723.8646811813283 3343.0400447586458 4225.237830318586 3788.3165842004823 0.8417718524669324 0.9519515099763282 1.0004910512183758 0.8421401495684372 0.9228382765635788 0.7805372201325047 1.0712068172115272 0.7190171731004353 0.8824605785855114 1.115333878889722 1.0 11.887341184468175 -10.612773594821457 1.031857864924284 0.9965046097987466 0.8928493239352923 0.25034092640986494 0.10055143357542 0.7067425041425065 1.4052643723286333 0.049107582778493995 0.015318840076545347 2.4390820223735777e-11 10.612773594821457 -0.1036552858634543 RRES(ph)EK ddPTM_A549_MK2206_60min_R1 1 RRESEK 6 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 RRES(1)EK 47.082 0.03549 40077000.0 2494.4 1807.4 1525.6 1594.3 350.58 297.7 445.57 290.42 361.79 2532.1 2440.4 True False 2915.393737775143 1899.3889399704258 1741.953020275274 1984.9035715708476 299.01014641051796 329.20241640273355 526.5243014485009 331.5879243739484 279.8451426599119 1960.0968513801752 1834.3813283864092 1.5893062650935468 1.0354384394226253 0.9496133619107219 1.082056135687362 0.1630032653426202 0.1794623676704736 0.2870309969365265 0.18076281045971265 0.15255559917090641 1.0685329277224764 1.0 10.841077860011014 -6.675308444291812 7.282360760533273 0.4778034038587371 1.14702845480159 0.5110033803381397 0.34235869150034853 0.18753077446740624 13.519067438835503 0.05697502439172789 0.11891856085168995 2.111988532189424e-07 6.675308444291812 0.669225050942853 RRES(ph)LGKK ddPTM_A549_MK2206_60min_R1 2 RRESLGKK 8 3 P55042 P55042 RRAD GTP-binding protein RAD 1 RRES(1)LGKK;RRES(1)LGKK 64.297 0.0027947 19259900.0 3118.1000000000004 3794.0 3664.3 2795.1 3348.1 2699.2 2334.4 2775.5 3523.8999999999996 4932.8 5142.8 True False 3644.3590497741675 3987.098394515767 4183.952839666157 3479.899625476806 2855.598925201249 2984.8275524160485 2758.530263036965 3168.9356246122666 2725.742276511965 3818.4770540216136 3865.700825940676 0.9427421349626435 1.0314037671411238 1.0823271194681854 0.9001988985089165 0.7387014809937782 0.7721310279332657 0.7135912444454898 0.8197570808757919 0.7051094741271617 0.9877839041236278 1.0 11.916514273573586 -6.474409497116898 5.5314165095516525 0.828981152941472 1.0176591495957288 0.44222259099793726 0.09756210658558935 0.19026013096011965 13.645740028713082 0.017216019739887813 0.03993490405788201 3.354211957886813e-07 6.474409497116898 0.18867799665425677 RRES(ph)LGKK ddPTM_A549_PD325901_60min_R1 2 RRESLGKK 8 3 P55042 P55042 RRAD GTP-binding protein RAD 1 RRES(1)LGKK;RRES(1)LGKK 62.303000000000004 0.0030712 27954000.0 4150.5 3630.0 3874.6000000000004 3421.1000000000004 5244.5 4001.7 3544.3 3961.6000000000004 3783.7 4087.9 4671.5 True False 4571.855704563392 3935.9128394861063 4137.553655862559 3632.4135771181714 4876.144412542792 3969.111481959407 3679.1802760153805 3882.582780184921 3624.684247171183 3829.789296354622 4096.935115078374 1.1159209448392575 0.9606968938805888 1.0099143724865673 0.8866173066176771 1.1901932238557096 0.9688001812260768 0.8980323516656421 0.9476798316613436 0.8847306938864817 0.9347937394125312 1.0 12.000329329080028 -7.5106586447581405 24.95721712990248 0.9408000263363819 1.0253125072112144 0.26535886814167287 0.07839588725368107 727.2145668691184 1485196.8250327506 0.011997390719565454 0.018589419963407783 3.085612287048831e-08 7.5106586447581405 0.08451248087483243 RRES(ph)LSYIPK ddPTM_A549_MK2206_60min_R1 4 RRESLSYIPK 10 2 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RRES(1)LSYIPK;RRES(0.961)LS(0.039)YIPK;RRES(1)LSYIPK;RRES(0.926)LS(0.074)YIPK 155.39 5.3061e-09 155678000.0 14788.4 17013.7 15206.9 12910.499999999998 22397.9 16635.8 14122.2 16485.5 22201.0 21475.000000000004 21824.5 True False 17284.320378333046 17879.62465861173 17363.46708444157 16073.573079574358 19103.19858031872 18396.189314049687 16688.020939282313 18822.370109726362 17172.508947711944 16623.782584964756 16404.874324442382 1.0536088260414367 1.089897082111263 1.0584334107680993 0.9798047069233318 1.1644830799987282 1.121385568107666 1.017259907588445 1.1473644806703602 1.0467930816224436 1.013344098601 1.0 14.001836921153528 -9.57121292094968 1.1561921658042698 1.00978755247973 1.077321234379631 0.20887692325161966 0.051841618844489595 0.4358469014932829 1.2031308111186385 0.013642486667833473 0.009928729227042412 2.6840282282603405e-10 9.57121292094968 0.06753368189990105 RRES(ph)LSYIPK ddPTM_A549_PD325901_60min_R1 3 RRESLSYIPK 10 2 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RRES(0.996)LS(0.004)YIPK;RRES(0.997)LS(0.003)YIPK;RRES(0.981)LS(0.019)YIPK 91.62 0.00013089 69023500.0 7781.3 7768.599999999999 8565.2 8330.599999999999 9701.0 8463.1 8248.4 8835.2 8839.8 9987.3 10277.599999999999 True False 8571.2518477097 8423.28718590407 9146.485978731738 8845.162241834687 9019.635226633165 8394.179319531859 8562.297375697666 8658.975004919683 8468.293947232558 9356.700173556723 9013.520355074277 0.9509327665615581 0.9345169094960851 1.0147517971247058 0.9813216028136209 1.000678411022331 0.9312875534592039 0.9499393176471178 0.9606651634225246 0.9395101595865618 1.0380738939907368 1.0 13.137874965271502 -11.03824167498592 1.3558451827602835 0.9998539692536715 0.960861635709191 0.3288030395146426 0.02822429382099454 0.5349505282984116 1.76354771252134 0.018799454450242305 0.004281490162195612 9.157107761260804e-12 11.03824167498592 -0.038992333544480506 RRES(ph)QEEPR ddPTM_A549_MK2206_60min_R1 2 RRESQEEPR 9 2 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;H0YD62;H0YF37 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 RRES(1)QEEPR;RRES(1)QEEPR 134.3 1.5202000000000001e-05 188478000.0 4617.3 4574.4 4215.9 4169.3 1915.4299999999998 1463.1100000000001 1262.1799999999998 1149.26 1554.05 6473.9 5373.299999999999 True False 5396.587357853259 4807.217421157858 4813.778014013195 5190.778687166992 1633.6727843547787 1617.9353290661854 1491.5017680774474 1312.1711244611386 1202.0601563079033 5011.441493681177 4038.961314464306 1.3361324701296422 1.1902113060460067 1.1918356327836368 1.2851766290946647 0.4044784431344462 0.4005820316406707 0.369278547614727 0.32487835913703816 0.29761615987830636 1.2407748189452152 1.0 11.979768612506062 -6.7546464033294935 24.988928455549647 0.5759515704630975 1.242294071718975 0.5675124880706464 0.28301784653833645 97.60383727190244 359046.1242825081 0.04298342687579301 0.0879192801106749 1.759355474318399e-07 6.7546464033294935 0.6663425012558775 RRES(ph)QEEPR ddPTM_A549_PD325901_60min_R1 4 RRESQEEPR 9 2 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;H0YD62;H0YF37 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 RRES(1)QEEPR;RRES(1)QEEPR;RRES(1)QEEPR;RRES(1)QEEPR 88.803 0.00036384 368897100.0 3391.94 3290.7 3801.4300000000003 3533.7299999999996 4590.4800000000005 3864.07 3643.8499999999995 4487.44 3775.3500000000004 5123.53 4419.47 True False 3736.2872517857463 3568.018837712654 4059.417899655603 3752.000476416884 4268.060521096283 3832.602295048327 3782.5187057412268 4397.934488871422 3616.6851686332775 4800.029441412901 3875.9032073285753 0.9639784720942354 0.9205644844190711 1.0473475942278532 0.968032552856992 1.1011783042017702 0.9888281750177934 0.9759063896614403 1.1346863566034848 0.9331206109055646 1.2384286151256265 1.0 11.920316827538228 -3.6979043673361223 7.582517967995692 0.988739449049019 0.7905888524670907 0.0 0.0994517919261027 0.0 0.0 0.008469730856586725 0.0 0.00020049134654096385 3.6979043673361223 -0.19815059658192835 RRES(ph)YSTTV ddPTM_A549_MK2206_60min_R1 2 RRESYSTTV 9 2 O60447;O60447-2 O60447 EVI5 Ecotropic viral integration site 5 protein homolog 1 RRES(0.958)Y(0.001)S(0.038)T(0.003)TV;RRES(0.963)Y(0.001)S(0.018)T(0.018)TV 48.74100000000001 0.010404 22963000.0 1303.56 906.98 953.29 696.67 1481.66 955.29 848.83 771.2 1638.23 1395.67 1504.87 True False 1523.5690590178667 953.1414079751996 1088.4808565142998 867.3541812747051 1263.7097767431335 1056.3781537298187 1003.0514235665127 880.5199617009473 1267.1735207157408 1080.3871776650885 1131.1692467008909 1.3468975252478166 0.8426160901696029 0.9622617125500063 0.7667766638850773 1.1171712636537843 0.9338816068513143 0.8867385906149412 0.7784157536717213 1.120233355363499 0.955106568549392 1.0 10.14359908764903 RRES(ph)YSTTV ddPTM_A549_PD325901_60min_R1 1 RRESYSTTV 9 2 O60447;O60447-2 O60447 EVI5 Ecotropic viral integration site 5 protein homolog 1 RRES(0.97)Y(0.001)S(0.025)T(0.004)TV 47.288000000000004 0.011401999999999999 8813800.0 1733.6 1480.1 1454.2 1335.8 1846.6 1125.3 1417.0 1450.2 1767.4 2115.8 2263.1 True False 1909.593795791131 1604.8332214114018 1552.890756814983 1418.3093321780866 1716.9011864241627 1116.135929892026 1470.9247104121516 1421.274623340108 1693.1223242990607 1982.2080269153137 1984.7530469728938 0.9621316862083199 0.8085808075009946 0.7824100631478669 0.7146024208610053 0.8650452453229617 0.5623550655807454 0.7411122067078204 0.7160964561852207 0.8530644791710371 0.9987177144978002 1.0 10.954743795772602 -9.60690298538997 0.9696162156502866 0.9739983159667094 0.7667963155245047 0.43452736864383623 0.0971752776683663 0.317815840570327 0.6249867873098159 0.029609064002301143 0.019846439020806784 2.472276351293354e-10 9.60690298538997 -0.20720200044220471 RRET(ph)PS(ph)PRPMR ddPTM_A549_MK2206_60min_R1 2 RRETPSPRPMR 11 3 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR 44.511 0.014457 253430000.0 2264.19 2475.64 1755.9299999999998 1837.44 2263.82 1636.45 1904.3400000000001 1852.88 3336.5 3568.9 3514.7 True False 2646.329917869268 2601.6395016866113 2004.9472777215271 2287.6128824858174 1930.8150768642206 1809.618052812405 2250.3339278237727 2115.531414207016 2580.7880772956587 2762.683011291304 2641.902989214765 1.0016756590505311 0.9847596646460811 0.7589026871563683 0.8658958681771086 0.7308425346224025 0.6849676389329744 0.8517852233827193 0.8007604453469357 0.9768670870321128 1.0457170541725447 1.0 11.367361776398852 -8.7933683864264 8.056164382217323 0.9893032970714976 0.830535471061684 0.4009898458008013 0.09311038060665608 0.17469552406384947 37.36409502726275 0.016664600827942244 0.017822149045967052 1.6092799986392185e-09 8.7933683864264 -0.15876782600981354 RRET(ph)PS(ph)PRPMR ddPTM_A549_PD325901_60min_R1 1 RRETPSPRPMR 11 3 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRET(1)PS(1)PRPMR 41.996 0.021656 245500000.0 1667.0 1190.0 1597.0 1325.0 1324.6 1569.3 1405.5 1586.4 1658.1 1599.2 1894.8 True False 1836.2326128194618 1290.2854763053635 1705.3820235411408 1406.842240706667 1231.564665621925 1556.520141099757 1458.9870716191106 1554.7580074932748 1588.4158231980718 1498.2262390788212 1661.7516121268334 1.1049982436721182 0.7764610949610936 1.0262556756953982 0.8466020014303375 0.7411243994797014 0.9366743680227917 0.8779814389659537 0.9356139606829565 0.9558683810543136 0.9015945753537015 1.0 10.698489038170305 -8.86886661347497 1.1180083252496715 0.986364402797135 0.8942364023752113 0.019981076879954873 0.10068633300157702 0.6030006928475667 1.5140503558166558 0.019888381552057213 0.02005216230902011 1.3524878941889622e-09 8.86886661347497 -0.0921280004219237 RRET(ph)PSPR ddPTM_A549_MK2206_60min_R1 2 RRETPSPR 8 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RRET(0.999)PS(0.001)PR;RRET(0.999)PS(0.001)PR 109.42 0.0031304 45840000.0 2962.5 2713.9 2597.0 1896.85 2877.5 2495.0 1891.72 2509.0 2805.3 3055.0 3566.8 True False 3462.497573828922 2852.025917995873 2965.2936507963354 2361.578335152832 2454.2235618012023 2759.0192439530406 2235.421037179698 2864.658433490244 2169.9040291435676 2364.873378210353 2681.065121327914 1.2914634360369321 1.0637659993067543 1.1060132882291367 0.8808358724174361 0.9153912533782997 1.0290758034950365 0.8337809549633426 1.0684777518836983 0.8093440222253269 0.8820648776479726 1.0 11.388590546532294 -4.561825013497137 0.6981767026939583 0.9190194212109334 2.0148287728570655 0.6181020676788338 0.08410210030961104 3.400259493460734 0.5787131549994357 0.014657132323351705 3.7057167963687365 2.7426790331639534e-05 4.561825013497137 1.0958093516461322 RRET(ph)PSPR ddPTM_A549_PD325901_60min_R1 2 RRETPSPR 8 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RRET(0.999)PS(0.001)PR;RRET(1)PSPR 93.05799999999999 0.0048056 58781000.0 3521.2 3521.4 4154.7 3590.1 4417.1 3399.4 4315.4 3511.9 3380.5 4681.299999999999 4219.4 True False 3878.6696318295662 3818.1607363543726 4436.662926240686 3811.8523232913253 4106.858134167754 3371.716413467477 4479.624908477487 3441.852399467747 3238.4293410054165 4385.721919084345 3700.44054898035 1.0481642876003852 1.0318124790321144 1.1989553318085873 1.0301077055113546 1.109829513488439 0.9111662162486431 1.2105652959920787 0.930119631408791 0.8751469718646772 1.1851891311408378 1.0 11.853481322969609 -8.32784697899063 24.999604973767063 0.9385750315348169 1.0732186176452871 0.015151570331871977 0.11084882921431574 149.4933147388929 56277.32306973655 0.013582696840641478 0.016420680682386717 4.700597020969362e-09 8.32784697899063 0.13464358611047023 RREVS(ph)PAPAVAGQSK ddPTM_A549_MK2206_60min_R1 2 RREVSPAPAVAGQSK 15 2 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RREVS(1)PAPAVAGQSK;RREVS(1)PAPAVAGQSK 80.975 0.00011961 6866400.0 2429.2 2452.3999999999996 2314.8 2269.17 3200.3999999999996 2418.9 2392.6000000000004 1875.6100000000001 3475.5 3829.9 4439.299999999999 True False 2839.1895717620982 2577.216684952678 2643.073447386737 2825.1167518669126 2729.6253995442435 2674.866392464132 2827.30444968396 2141.4834613147236 2688.304799233046 2964.7229300189288 3336.8992915529357 0.8508466464508697 0.7723387671532891 0.7920746826484822 0.846629312133706 0.8180125203220989 0.801602373567377 0.8472849201176164 0.6417584932022669 0.8056295873352399 0.8884664087777122 1.0 11.7042924309457 -10.43205198134011 0.8726197447115734 0.9951262543402216 0.7974517815277634 0.4090958178351606 0.06333882544206847 0.27681025164872536 0.3937974829162841 0.03251868098299912 0.010637529293318059 3.6978391715488676e-11 10.43205198134011 -0.1976744728124582 RREVS(ph)PAPAVAGQSK ddPTM_A549_PD325901_60min_R1 1 RREVSPAPAVAGQSK 15 2 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RREVS(1)PAPAVAGQSK 76.301 0.00020495 8701600.0 2566.0 2197.2 1871.1 2097.9 2436.3 2651.9 2496.4 2385.5 2295.8 2523.5 3094.0 True False 2826.4984310106383 2382.3657550740713 1998.0840978383405 2227.482518323408 2265.1826927787233 2630.303805634642 2591.4018680824947 2337.9193311114514 2199.315509859558 2364.165779336795 2713.4576144819634 1.0416593264347915 0.8779815621070233 0.7363609024789586 0.8209019025892045 0.8347956793904732 0.9693550367606546 0.9550183700132089 0.8616015664419333 0.8105214167052459 0.8712742615617185 1.0 11.40591665792531 -7.232465924005739 24.058410717713933 0.9117485593814785 0.8539079139753522 0.07299142445554174 0.08446679690728313 1024.5756378020185 850766.690967989 0.014557082318142225 0.025210106679171267 5.855096752915936e-08 7.232465924005739 -0.05784064540612632 RRFS(ph)DS(ph)EGEETVPEPR ddPTM_A549_MK2206_60min_R1 2 RRFSDSEGEETVPEPR 16 2 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 2 RRFS(0.894)DS(0.677)EGEET(0.429)VPEPR;RRFS(0.994)DS(0.908)EGEET(0.098)VPEPR 58.997 0.0049172 13394300.0 930.49 1244.8000000000002 773.3 1099.32 1461.73 1133.0 1226.48 1269.27 1992.25 1254.9 1517.77 True False 1087.5339637036536 1308.1550030293156 882.9655680249542 1368.6534493503505 1246.7114533420217 1252.8933079754677 1449.3155401857337 1449.192909476351 1541.0085559695126 971.4172184340987 1140.8658206790033 0.9532531731526426 1.1466335298315342 0.7739433963403726 1.199662067652948 1.0927765831393064 1.0981951472871627 1.2703645896965796 1.2702571005360141 1.3507360182395143 0.8514736797496004 1.0 10.155913408256968 -6.312507383073595 24.995299213999452 1.1756894614767148 0.9768118749311734 0.1908532572170626 0.15624428880456873 349.1813061918099 170906.66722431523 0.021342538385398662 0.049595638887533725 4.869592467127253e-07 6.312507383073595 -0.19887758654554144 RRFS(ph)DS(ph)EGEETVPEPR ddPTM_A549_PD325901_60min_R1 2 RRFSDSEGEETVPEPR 16 2 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 2 RRFS(1)DS(0.995)EGEET(0.005)VPEPR;RRFS(1)DS(0.899)EGEET(0.101)VPEPR 93.26899999999999 6.5019e-06 18281800.0 1505.45 1647.21 1503.13 1439.5900000000001 1643.69 1383.9499999999998 1498.81 1101.59 1590.44 2248.8 1511.37 True False 1658.282175746284 1786.0261675839981 1605.1414408549751 1528.5102047538956 1528.2428848226646 1372.6795700471605 1555.8480347303012 1079.6179232693632 1523.599337704083 2106.8103842173914 1325.4810713638035 1.2510794847036613 1.347455053240658 1.210987825879268 1.153173921360637 1.1529722436928027 1.0356085799360333 1.1737987575556024 0.8145102533667503 1.149468951779472 1.5894684803379868 1.0 10.372300352494902 -6.439416890576146 0.944401231352518 1.0559389984621792 1.3104054535250143 0.027315779267545248 0.1857124653755458 0.4328401576982246 0.6645054946098973 0.01520152427620788 0.07348975421241251 3.635658722253303e-07 6.439416890576146 0.25446645506283505 RRFS(ph)DSEER ddPTM_A549_MK2206_60min_R1 2 RRFSDSEER 9 2 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 RRFS(0.753)DS(0.247)EER;RRFS(0.934)DS(0.066)EER 107.12 0.00016379 54062000.0 3545.5 3963.7 3163.7 2961.2 5403.799999999999 3232.6 2965.2 3574.1 5562.9 4907.299999999999 5170.5 True False 4143.89372084741 4165.435399668462 3612.36023220037 3686.6941329333176 4608.908178370575 3574.6715863737872 3503.93845782951 4080.7396202221944 4302.912032125886 3798.737521732132 3886.522151459566 1.066221562455572 1.0717642245018857 0.9294582898089914 0.9485843613547388 1.185869525184546 0.9197610220827728 0.9015614272296432 1.0499720472941834 1.1071368859971495 0.977413063323345 1.0 11.92426402364917 -8.468768508112923 24.998344108696433 1.0520643216626029 1.002736865751223 0.012264181526291718 0.08478467307063922 708.3752924263622 327262.1950648974 0.014131425649748473 0.017083993979998213 3.3980635122664148e-09 8.468768508112923 -0.04932745591137988 RRFS(ph)DSEER ddPTM_A549_PD325901_60min_R1 2 RRFSDSEER 9 2 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 RRFS(0.949)DS(0.051)EER;RRFS(0.979)DS(0.021)EER 66.262 0.0017885000000000002 26053200.0 2261.6 1784.07 2067.3599999999997 1966.0500000000002 2382.66 1994.1499999999999 2187.8999999999996 2246.8999999999996 2251.6000000000004 2615.2 2360.8 True False 2491.195967098077 1934.4198400942093 2207.663481645592 2087.488443276486 2215.3101813307694 1977.9103035583257 2271.1617317648183 2202.0838168410487 2156.973082149918 2450.075825687175 2070.436566344222 1.2032225510278693 0.9343052917143085 1.0662792174037345 1.0082358847450095 1.069972496304174 0.955310747361234 1.0969482324083069 1.063584295523372 1.041796265199515 1.1833619370494812 1.0 11.01571928702092 -11.814610163152711 0.006039013824306627 3.059747058526566e-05 2.0211941621899707 0.0 0.08536442477262876 29379.079852028073 27.234395275591748 4763.694342293218 4358.2096163626375 1.532462432585263e-12 11.814610163152711 2.0211635647193855 RRFS(ph)DSEGEETVPEPR ddPTM_A549_MK2206_60min_R1 4 RRFSDSEGEETVPEPR 16 2 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 RRFS(0.996)DS(0.004)EGEETVPEPR;RRFS(0.871)DS(0.129)EGEETVPEPR;RRFS(0.822)DS(0.167)EGEET(0.01)VPEPR;RRFS(0.592)DS(0.408)EGEETVPEPR 119.38 3.8154e-08 122381000.0 1094.3999999999999 1337.79 1098.73 1046.2 2069.51 1369.1599999999999 1288.9199999999998 963.6179999999999 1901.85 1934.08 2005.54 True False 1279.1079644889026 1405.877796836912 1254.5464354791907 1302.519046965703 1765.0878204633198 1514.0436024251467 1523.1000799492815 1100.2138024563583 1471.0840116303766 1497.1699847231034 1507.5090679118493 0.8484910583394896 0.932583310284353 0.8321982681118768 0.864020704545352 1.1708638163671279 1.0043346568537388 1.0103422343316504 0.7298223446047574 0.9758375872777153 0.9931416112786192 1.0 10.557950964858499 RRFS(ph)DSEGEETVPEPR ddPTM_A549_PD325901_60min_R1 3 RRFSDSEGEETVPEPR 16 2 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 RRFS(0.996)DS(0.004)EGEETVPEPR;RRFS(0.964)DS(0.036)EGEETVPEPR;RRFS(0.948)DS(0.052)EGEETVPEPR 91.725 2.5975e-06 122134000.0 1392.24 1347.72 1598.96 1132.3700000000001 1329.8700000000001 1512.87 1225.1599999999999 1105.46 1210.27 1505.58 2005.6 True False 1533.5791798870819 1461.2970942237519 1707.475040927579 1202.3139231011385 1236.464519002439 1500.5496883104488 1271.7841342332767 1083.4107330834067 1159.4065607272967 1410.5174218561096 1758.9239145459046 0.8718848878025521 0.8307903952747211 0.9707498015162253 0.6835508421701889 0.7029664607872779 0.8531066499814124 0.7230467012904358 0.615950880037416 0.6591567441543467 0.8019206573925388 1.0 10.780477362422852 -10.942300888325919 1.2387208918135442 0.9982682892910371 0.7583000945279206 0.08154634052615806 0.11558886408678977 0.37416818626809895 1.0322481548635352 0.07453770406167609 0.017985998725189453 1.142086798936776e-11 10.942300888325919 -0.23996819476311648 RRFSDS(ph)EER ddPTM_A549_PD325901_60min_R1 1 RRFSDSEER 9 2 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 RRFS(0.432)DS(0.568)EER 53.528 0.007114 26871000.0 1314.5 1052.8 1315.5 1127.2 1004.6 1166.2 977.8 893.37 1359.2 1395.2 1736.4 True False 1447.9470723162458 1141.5231508019217 1404.7777407441276 1196.8245839430604 934.0403616818555 1156.7028538523784 1015.0107140726906 875.5510345147926 1302.077550745322 1307.1068338936777 1522.8338079465045 0.9508240917429845 0.7496045496528811 0.922476066274381 0.7859193680214798 0.6133567279684845 0.759572612465281 0.6665275677333444 0.5749485137156541 0.855035883725969 0.8583384654798752 1.0 10.572542788841794 -9.458679362818444 1.4466601205645055 0.9621810299562884 0.7545705193762837 0.22988656489828296 0.11578436801017777 0.2738887047130409 1.17588583641712 0.027439513760411875 0.022160924105123603 3.4779284018366763e-10 9.458679362818444 -0.20761051058000468 RRFSDS(ph)EGEETVPEPR ddPTM_A549_PD325901_60min_R1 1 RRFSDSEGEETVPEPR 16 2 A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286 A0A1B0GWH8 CLN3 Battenin 1 RRFS(0.408)DS(0.592)EGEETVPEPR 100.67 2.6354e-07 15242000.0 194.98 411.52 341.4 337.67 481.63 276.42 210.19 259.38 359.45 377.94 378.46 True False 214.77422606331035 446.2002346295654 364.5694570049753 358.52710899578904 447.80197033329887 274.1689271667589 218.18889547038134 254.2064624203264 344.34356652104617 354.07680390035597 331.9118192556056 0.6470821875068947 1.3443336716067533 1.0983925122721223 1.0801878336236257 1.3491594584899254 0.8260294188427836 0.6573700688325108 0.7658855384856355 1.037454970098148 1.0667797389513298 1.0 8.374656193935877 -7.288507927204585 24.945898396094467 0.9551104279516534 1.115576813500038 0.1661411146326256 0.21112437740342535 1216.811371493115 1121389.042183815 0.0315261456765554 0.050406791674418215 5.1462641341959566e-08 7.288507927204585 0.16046638554838455 RRGDS(ph)ES(ph)EEDEQDSEEVR ddPTM_A549_MK2206_60min_R1 2 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RRGDS(1)ES(0.958)EEDEQDS(0.042)EEVR;RRGDS(1)ES(0.612)EEDEQDS(0.388)EEVR 163.4 4.3126000000000005e-23 192597000.0 6078.3 6697.200000000001 4641.7 3931.3999999999996 9466.9 7505.0 7167.4 6137.6 9767.7 9622.5 9184.900000000001 True False 7104.168439832686 7038.058873945961 5299.9628567198115 4894.593176487252 8074.331550726595 8299.174118584193 8469.623803671662 7007.623595611692 7555.331545811722 7448.770566883511 6904.035839655931 1.028987769592275 1.0194122738355758 0.7676615504046891 0.7089466639749046 1.169508927567935 1.2020757584882105 1.2267641710408261 1.015003942384071 1.0943355048093506 1.0789009124342446 1.0 12.753224238396752 -6.776956186470418 24.999735446376775 1.0765757933477569 0.8830069932097162 0.4748489168914619 0.11299139085593558 199.39230262071604 321248.5742375989 0.018004866452656053 0.034111092870630286 1.671259209755582e-07 6.776956186470418 -0.19356880013804068 RRGDS(ph)ES(ph)EEDEQDSEEVR ddPTM_A549_PD325901_60min_R1 4 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RRGDS(0.645)ES(0.881)EEDEQDS(0.474)EEVR;RRGDS(0.986)ES(0.974)EEDEQDS(0.04)EEVR;RRGDS(0.999)ES(0.998)EEDEQDS(0.002)EEVR;RRGDS(0.997)ES(0.985)EEDEQDS(0.018)EEVR 98.95700000000001 6.3227e-07 170126500.0 2516.17 1807.87 1851.97 2000.36 1944.62 1927.1100000000001 1734.8799999999999 2015.12 2305.53 2122.3 2680.95 True False 2771.6097260935476 1960.225549620317 1977.6558210003034 2123.9176940528205 1808.0365997748058 1911.416255091285 1800.901807762762 1974.9268507689412 2208.636591796544 1988.2976158060162 2351.210145942282 1.1788013635773014 0.8337092084275299 0.8411225276538302 0.9033295886878836 0.7689812851884443 0.8129499859423484 0.7659467661241417 0.8399618614173087 0.9393616285674034 0.8456486202381441 1.0 11.199187774295202 -8.999954777808075 2.460823103486292 0.9769653756227883 0.8590105462455926 0.004890675734047556 0.11405257242092538 0.3222844295416301 3.9249741407629974 0.01981768116388355 0.019904617314196765 1.0001041333665025e-09 8.999954777808075 -0.1179548293771957 RRGDS(ph)ESEEDEQDS(ph)EEVR ddPTM_A549_MK2206_60min_R1 1 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RRGDS(0.902)ES(0.496)EEDEQDS(0.602)EEVR 79.311 0.0015642000000000002 8161100.0 182.79 0.0 201.5 0.0 203.66 0.0 0.0 0.0 182.93 0.0 269.71 True False 213.64048321356583 0.0 230.0757299327922 0.0 173.70188378677065 0.0 0.0 0.0 141.49664707918328 0.0 202.73356338268243 1.0537992804392993 0.0 1.1348674886086738 0.0 0.8567988491322909 0.0 0.0 0.0 0.6979438664139318 0.0 1.0 7.663441142503174 -9.071570085523378 3.045749384349413 0.8834948597268921 0.37068354863344644 0.0 0.504010405521247 0.24805271026279038 4.780655347896422 0.07622733753352262 0.07522848312945538 8.480665122317876e-10 9.071570085523378 -0.5128113110934457 RRGDS(ph)ESEEDEQDS(ph)EEVR ddPTM_A549_PD325901_60min_R1 1 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RRGDS(1)ES(0.072)EEDEQDS(0.928)EEVR 138.44 2.8391999999999997e-13 130440000.0 1733.5 2083.8 2281.2 2399.0 2401.9 2163.7 2146.1 2719.5 2228.6 2127.1 2367.5 True False 1909.483643864748 2259.409139096735 2436.0159499699757 2547.180781475694 2233.198830105165 2146.0795445724484 2227.7710098909815 2665.257439093522 2134.9396921652633 1992.794542986844 2076.3125088190195 0.9196513702799192 1.0881835607597714 1.1732414747891449 1.2267810219592128 1.075560071337903 1.0336014137838583 1.0729459079154273 1.2836494640248 1.0282362038937916 0.959775821087896 1.0 11.019807886832021 -8.970879008953641 24.997965738074146 1.0124570207287888 1.1125950619187308 0.22157958436304048 0.09337770194695244 218.4581292508104 187529.82570990451 0.01598216884537344 0.016789104090554105 1.0693527510421658e-09 8.970879008953641 0.10013804118994196 RRGDS(ph)ESEEDEQDSEEVR ddPTM_A549_MK2206_60min_R1 2 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RRGDS(0.717)ES(0.278)EEDEQDS(0.005)EEVR;RRGDS(0.717)ES(0.283)EEDEQDSEEVR 140.17 2.0506e-14 36018000.0 535.0799999999999 430.49 528.12 638.27 727.01 608.51 719.85 598.6099999999999 771.03 851.12 920.39 True False 625.3884225500019 452.4001022285431 603.0153572809243 794.6461786530293 620.0677920643235 672.9021243037528 850.6374271106746 683.4648006662394 596.3929360819035 658.8514008714877 691.8317615282604 0.9039602650917837 0.6539163527693332 0.8716213837145318 1.148611877687794 0.8962696229710387 0.972638380778165 1.2295437625350008 0.9879060758304327 0.8620490836738517 0.9523289295306148 1.0 9.434277438159551 -6.000501435786748 24.990592134986937 0.9711790315171012 0.7748959060408898 0.35009512467255754 0.11619617952851172 17.014157172468853 848156.5187218287 0.01655779314034883 0.05066198118012112 9.988460677248086e-07 6.000501435786748 -0.1962831254762114 RRGDS(ph)ESEEDEQDSEEVR ddPTM_A549_PD325901_60min_R1 1 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RRGDS(0.599)ES(0.401)EEDEQDSEEVR 119.06 1.2327e-10 17730000.0 278.8 235.14 301.23 145.49 405.86 280.25 144.47 459.78 259.9 314.01 289.33 True False 307.10357075828784 254.95607302390172 321.673279243142 154.47658686823624 377.35379374098926 277.9677369165912 149.9678849070174 450.60932720956754 248.97730682659594 294.1833550107183 253.74424421398396 1.2102878302110596 1.0047757883678174 1.2677067030213032 0.608788535664144 1.4871422794629567 1.0954642056124018 0.5910198490277818 1.7758405854895614 0.9812136137229263 1.1593695688428376 1.0 7.987231287193245 RRGDSES(ph)EEDEQDSEEVR ddPTM_A549_MK2206_60min_R1 2 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RRGDS(0.125)ES(0.875)EEDEQDSEEVR;RRGDS(0.215)ES(0.785)EEDEQDSEEVR 90.193 1.96e-06 21221900.0 465.95000000000005 255.81 490.15999999999997 436.02 548.73 417.35 439.78999999999996 190.96 705.22 614.47 466.06 True False 544.5909686162315 268.8296363471475 559.672058480682 542.8449195736816 468.0125438982358 461.5136999854912 519.6941502660327 218.0291647904731 545.4887960049288 475.66080023205126 350.3244393983651 1.5545331908658526 0.7673733434322371 1.5975821140022182 1.5495490994175127 1.3359403206410152 1.3173893913255914 1.4834653019313675 0.6223635586626749 1.5570960362963318 1.3577722440630589 1.0 8.452547826983889 RRGDSES(ph)EEDEQDSEEVR ddPTM_A549_PD325901_60min_R1 3 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RRGDS(0.132)ES(0.868)EEDEQDSEEVR;RRGDS(0.062)ES(0.938)EEDEQDSEEVR;RRGDS(0.426)ES(0.574)EEDEQDSEEVR 143.47 3.4868e-17 50725000.0 973.53 1222.23 932.45 1033.47 958.23 1058.47 1129.3899999999999 1017.4100000000001 1165.5 1059.56 952.72 True False 1072.3620489250923 1325.231611516558 995.7316642773559 1097.3050947193353 890.9272305140396 1049.8501712546106 1172.3695544759207 997.1169594072957 1116.5180881354277 992.6592007743591 835.5414797896761 1.283433647357674 1.5860751902468653 1.191720205833471 1.3132861997414549 1.06628725450986 1.2564907866918595 1.403125497457088 1.1933781667647327 1.3362808611446548 1.1880429934181518 1.0 9.706567641282513 -10.83457025625594 0.744110944749057 0.9681344752604277 1.296002015415519 0.19121053244758246 0.13700107924938013 0.6775057515225632 0.556107914172547 0.1407906947126194 0.023789695790023935 1.4636247463481675e-11 10.83457025625594 0.32786754015509123 RRGEEGHDPKEPEQLR ddPTM_A549_PD325901_60min_R1 2 RRGEEGHDPKEPEQLR 16 3 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 102.15 2.1751999999999998e-07 131438000.0 2756.6000000000004 3221.7 3658.1 3531.5 3728.3999999999996 4262.5 3209.9 3722.2 4571.5 4459.4 4732.4 False True 3036.4480026983347 3493.2039655571343 3906.360663942294 3749.6327343815815 3466.530046281735 4227.78761322737 3332.054501024676 3647.957800990587 4379.375752819482 4177.832722954032 4150.344801155284 0.7316134316968348 0.841665965821628 0.9412135258870361 0.9034508972213199 0.8352390493717045 1.0186593682651448 0.8028379955557357 0.8789529486743239 1.055183596216017 1.006623045340979 1.0 12.019015481905514 -8.753145387458583 24.174562282533238 1.0260589214508598 0.8734655132638903 0.47018609458362226 0.07140670288524938 72.73058793124416 211987.93968192118 0.0118586818209778 0.013331565211506614 1.765446708460111e-09 8.753145387458583 -0.15259340818696943 RRGNDPLT(ph)SSPGR ddPTM_A549_MK2206_60min_R1 1 RRGNDPLTSSPGR 13 2 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RRGNDPLT(0.777)S(0.124)S(0.099)PGR 52.254 0.045739999999999996 73670000.0 1276.4 1295.5 1081.6 911.04 1186.2 951.61 753.99 1046.7 1705.8 1865.0 1864.4 True False 1491.8251150161143 1361.4354164721065 1234.98714389731 1134.2448408981397 1011.7115513496383 1052.3087385724048 890.9802231953562 1195.0729303843123 1319.439023602858 1443.6952047012471 1401.4180251776836 1.064511151001478 0.9714698912192828 0.8812410870344899 0.8093551106953477 0.7219198934032299 0.7508885426523497 0.6357704890247792 0.8527597825301204 0.9415028206416629 1.030167429534955 1.0 10.452671642212326 -8.82720956261341 3.0932697498478845 0.9753871225911754 0.8270513511813883 0.2752443590932643 0.11192954960134083 0.2734274852229378 5.070765137980847 0.021834984317106898 0.023251412668124364 1.488642581110817e-09 8.82720956261341 -0.14833577140978715 RRGNDPLT(ph)SSPGR ddPTM_A549_PD325901_60min_R1 2 RRGNDPLTSSPGR 13 2 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RRGNDPLT(0.606)S(0.197)S(0.197)PGR;RRGNDPLT(0.363)S(0.363)S(0.273)PGR 65.51100000000001 0.010108 164660000.0 4984.0 4347.200000000001 3694.8999999999996 3949.0 3874.6 4285.6 4354.6 4039.9 4434.299999999999 4790.4 5616.0 True False 5489.972010973122 4713.553800499727 3945.65813323867 4192.920761170283 3602.4614626443554 4250.699494486149 4520.316685928553 3959.321025259759 4247.941791693628 4487.933326465222 4925.267602757179 1.1146545637235672 0.9570147615656591 0.801105331013868 0.8513082129432062 0.7314245139954806 0.8630392980285163 0.9177809310093257 0.8038793715580692 0.8624793887982083 0.9112059868488901 1.0 12.265986396780836 -10.617117045932872 0.9089843735731714 0.9996144684031961 0.8719833614512953 0.05754907274844556 0.097817020216605 0.7734114065318657 1.1456002814858428 0.06376498689909758 0.017567669159127844 2.4148099356096546e-11 10.617117045932872 -0.12763110695190083 RRGNDPLTS(ph)SPGR ddPTM_A549_MK2206_60min_R1 2 RRGNDPLTSSPGR 13 2 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RRGNDPLT(0.011)S(0.574)S(0.415)PGR;RRGNDPLT(0.01)S(0.567)S(0.423)PGR 77.562 0.00018617 42674000.0 955.36 965.8399999999999 653.0 793.75 910.03 741.4300000000001 1013.76 814.76 1165.65 1244.56 1545.71 True False 1116.6014116905312 1014.9971305638128 745.6052190874113 988.2187856327917 776.1657925094518 819.8876304785981 1197.9470696780127 930.2547250978529 901.6321361605534 963.4130316155404 1161.8675475742318 0.9610401925949236 0.8735910841842017 0.6417299636641883 0.8505434097854035 0.6680329389782379 0.7056635949513991 1.0310530423016877 0.800654710633803 0.7760197262097537 0.8291935114522921 1.0 10.182229896133101 -10.86785127127451 0.7369671097364558 1.0236467304954404 0.8051546319578772 0.020582542711481633 0.1229307632883053 0.9622731036510254 0.7563298895755581 0.1337261147740691 0.021329853734450264 1.355653590734266e-11 10.86785127127451 -0.21849209853756324 RRGNDPLTSS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 RRGNDPLTSSPGR 13 2 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RRGNDPLT(0.006)S(0.297)S(0.697)PGR;RRGNDPLT(0.002)S(0.044)S(0.954)PGR 83.823 8.7145e-05 41385000.0 1799.62 1482.5900000000001 1374.41 1578.71 1830.55 1741.63 1664.53 1568.37 1701.78 2022.5 2364.13 True False 1982.3160975897767 1607.533062450057 1467.685727598734 1676.2233311894506 1701.9784830546694 1727.4467427155857 1727.8746000157655 1537.087629987536 1630.2601046993623 1894.7990048379895 2073.35699745483 0.9560900993042629 0.7753286406650665 0.7078789274593841 0.8084586172314344 0.820880574423001 0.8331641607480671 0.8333705204346551 0.7413521317720022 0.7862901114958033 0.913879764634826 1.0 11.017752830494189 -10.667961825790803 0.845361877383842 1.0052199769699153 0.8028147952601372 0.4219893579653946 0.06478594781954748 0.3551290274669682 0.43405699441526374 0.04604089719270474 0.01108391448192905 2.1480192753630437e-11 10.667961825790803 -0.20240518170977806 RRGS(ph)QEK ddPTM_A549_MK2206_60min_R1 1 RRGSQEK 7 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RRGS(1)QEK 64.297 0.008497200000000002 24023000.0 6449.9 5633.9 4636.0 4357.1 1065.3 417.54 453.72 689.96 1293.2 7647.0 6408.2 True False 7538.485435084954 5920.641445667463 5293.454511009551 5424.589695597655 908.5957811943765 461.72380565937954 536.1550509531918 787.7639429138818 1000.292264816049 5919.537388927843 4816.867082677344 1.5650183627020202 1.2291477726175104 1.0989413700133297 1.1261655350852078 0.18862795372990748 0.09585562518838303 0.11130783593372114 0.16354280269573507 0.20766449388096042 1.2289185662224262 1.0 12.233879399201896 -6.648747168036625 5.688419035209676 0.4774516603473016 1.261441133318831 0.5371502244092756 0.3688290989813181 0.15040242593144196 6.964502975943461 0.05836519657040785 0.1226702453281902 2.245188618357689e-07 6.648747168036625 0.7839894729715293 RRGS(ph)QEK ddPTM_A549_PD325901_60min_R1 2 RRGSQEK 7 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RRGS(1)QEK;RRGS(1)QEK 70.908 0.0068655 166387000.0 10675.3 10145.3 9604.8 10478.7 12535.1 9325.8 9382.1 10149.8 7057.8 10525.0 12557.4 True False 11759.048597259507 11000.280035933449 10256.639486354385 11125.945500145619 11654.677819747387 9249.853776759139 9739.140949582112 9947.35427663593 6761.185210160633 9860.449703792261 11012.919407917196 1.0677503540801287 0.9988523141307417 0.9313279346238454 1.010263045432546 1.0582732323791302 0.839909331408474 0.8843378026157748 0.9032440816269635 0.6139321427613473 0.8953529340007316 1.0 13.42690934227747 -7.295949785513248 9.424177372289542 0.8274526430368647 1.0077438025433127 0.3809863026001833 0.09591056701527664 0.49002934383094054 130.69820956796863 0.021205489218789057 0.0340493481155685 5.058831504143238e-08 7.295949785513248 0.18029115950644803 RRGS(ph)S(ph)GSVDETLFALPAASEPVIR ddPTM_A549_PD325901_60min_R1 1 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RRGS(0.654)S(0.691)GS(0.616)VDET(0.038)LFALPAASEPVIR 46.403999999999996 0.003971 1750900.0 0.0 128.48 198.34 0.0 170.7 236.16 148.19 178.26 164.14 142.52 157.87 True False 0.0 139.3074605005992 211.8005451153099 0.0 158.71062088303083 234.2367912585985 153.82945154267952 174.70446445773527 157.2417666122257 133.52126287738463 138.45299082038392 0.0 1.006171550900795 1.5297650405405854 0.0 1.1463141384134292 1.6918145998194838 1.1110590723333928 1.2618323621797427 1.1357050915297062 0.9643797659134915 1.0 7.113252408485937 RRGS(ph)SGS(ph)VDETLFALPAASEPVIR ddPTM_A549_MK2206_60min_R1 1 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RRGS(0.753)S(0.319)GS(0.472)VDET(0.457)LFALPAASEPVIR 91.603 1.9932000000000001e-07 5973000.0 531.58 534.72 496.56 478.91 604.88 704.65 527.77 703.34 748.4 549.45 327.46 True False 621.2977081167865 561.934964026218 566.9796747167608 596.2429714990867 515.9029532796907 779.2155952911861 623.6589774344665 803.0405988884136 578.8885949492199 425.3288633904023 246.1426445637655 2.524136803754189 2.2829646809967694 2.303459750835169 2.4223473041650228 2.095951127014244 3.165707416007401 2.533729896904971 3.2625008978498182 2.35184194098172 1.7279771416456728 1.0 7.943350818196052 -10.270358427490294 0.8157145870967915 1.0496852332417825 2.5486723979635744 0.5491948987871937 0.3969617050859055 0.24004054865415336 0.30607428442824175 0.19813464168156164 0.07193102823703243 5.3658876161351714e-11 10.270358427490294 1.4989871647217918 RRGS(ph)SGSVDET(ph)LFALPAASEPVIR ddPTM_A549_MK2206_60min_R1 1 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RRGS(0.41)S(0.311)GS(0.374)VDET(0.905)LFALPAASEPVIR 89.35600000000001 8.716000000000001e-06 5076700.0 1022.7 1173.2 1261.0 1005.4 1773.5 1179.0 1236.2 1352.7 1928.0 1292.9 1282.3 True False 1195.3067573855994 1232.9108688576428 1439.8287615148927 1251.7230451341213 1512.6204993412432 1303.760997443139 1460.801538368015 1544.4493674700093 1491.3110783833445 1000.8329920419521 963.8695203203953 1.2401126212480225 1.2791263162339823 1.4938004897553832 1.2986436636341006 1.5693208130893486 1.3526322494457155 1.5155594274652826 1.6023427807496458 1.5472126122295318 1.0383490409669454 1.0 9.912694050828117 -10.805489885293381 1.054579308050618 1.0002392432340537 1.440942602159854 0.635806219036612 0.12034519635505386 0.26706008802838277 0.5277536558514085 0.08659117966868786 0.02164207081376476 1.5649847672529055e-11 10.805489885293381 0.44070335892580026 RRGS(ph)SGSVDETLFALPAASEPVIR ddPTM_A549_MK2206_60min_R1 5 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RRGS(0.651)S(0.172)GS(0.172)VDET(0.005)LFALPAASEPVIR;RRGS(0.93)S(0.056)GS(0.014)VDETLFALPAASEPVIR;RRGS(0.736)S(0.116)GS(0.116)VDET(0.031)LFALPAASEPVIR;RRGS(0.332)S(0.332)GS(0.332)VDET(0.004)LFALPAASEPVIR;RRGS(0.331)S(0.331)GS(0.331)VDET(0.006)LFALPAASEPVIR 186.35 8.1204e-51 163302000.0 2885.6800000000003 3277.57 2890.8199999999997 2501.9500000000003 3798.99 2551.7699999999995 3203.13 3272.6600000000003 4736.1 4088.2300000000005 4352.5599999999995 True False 3372.7122358976017 3444.384313366641 3300.781744934561 3114.9278623168043 3240.163603491623 2821.796607672162 3785.0972590137058 3736.569577100911 3663.3809119975954 3164.696003600955 3271.6992274551476 1.0308747844529174 1.0527814673373306 1.0088891170787833 0.9520825863750666 0.9903610870770494 0.8624865586642152 1.156920913527219 1.1420883514427935 1.119718121169443 0.9672942968118057 1.0 11.675824409774297 -7.77854039560356 24.99992575904712 1.072591856769545 0.986206370246723 0.3085698225716911 0.07003216539110264 266.6976546353015 389883.776162921 0.011574650009173286 0.01601368946719127 1.6651739355692648e-08 7.77854039560356 -0.08638548652282196 RRGS(ph)SGSVDETLFALPAASEPVIR ddPTM_A549_PD325901_60min_R1 6 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RRGS(0.332)S(0.332)GS(0.332)VDET(0.003)LFALPAASEPVIR;RRGS(0.687)S(0.155)GS(0.155)VDET(0.003)LFALPAASEPVIR;RRGS(0.572)S(0.151)GS(0.277)VDETLFALPAASEPVIR;RRGS(0.313)S(0.313)GS(0.313)VDET(0.062)LFALPAASEPVIR;RRGS(0.333)S(0.333)GS(0.333)VDET(0.002)LFALPAASEPVIR;RRGS(0.327)S(0.327)GS(0.327)VDET(0.02)LFALPAASEPVIR 232.54 2.6406999999999995e-89 174303580.0 5142.110000000001 5417.66 5679.79 5824.68 6098.76 5939.28 5524.070000000001 6300.0599999999995 5897.42 6138.860000000001 6325.66 True False 5664.13322177869 5874.2252214794225 6065.25470475187 6184.457254791933 5670.404137179806 5890.9124728420065 5734.291506737094 6174.400360998537 5649.571946230483 5751.2513319356 5547.643921662567 1.020997977116241 1.0588684682053247 1.093302812941567 1.1147898715421736 1.022128351648144 1.0618764571098438 1.0336444782163652 1.1129770490295163 1.0183732096016302 1.0367016003817373 1.0 12.43765947518271 -8.94474209256647 11.700603952586334 1.008093409091436 1.0647648277622148 0.28534456278371734 0.032009020051931375 0.4806789183696001 100.53874091961605 0.005264126080504708 0.005591896809945309 1.135685046349072e-09 8.94474209256647 0.05667141867077885 RRGSS(ph)GSVDETLFALPAASEPVIR ddPTM_A549_MK2206_60min_R1 3 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RRGS(0.264)S(0.367)GS(0.367)VDET(0.003)LFALPAASEPVIR;RRGS(0.255)S(0.369)GS(0.369)VDET(0.007)LFALPAASEPVIR;RRGS(0.212)S(0.294)GS(0.294)VDET(0.199)LFALPAASEPVIR 130.32 3.1552e-23 144970000.0 1546.52 2139.2200000000003 1716.38 1786.68 3081.04 2149.8 1947.85 2054.1 3485.62 2433.34 2967.23 True False 1807.5347672161715 2248.0971606526123 1959.7884930126352 2224.416680207114 2627.8230974290086 2377.290409078254 2301.7491316212077 2345.274965417422 2696.132635391366 1883.6468039719741 2230.384899618098 0.8104138292568561 1.0079413472703957 0.8786772603007685 0.9973241302826225 1.17819265090925 1.0658655416315408 1.0319963751616723 1.051511317987759 1.2088194445062 0.8445388974317863 1.0 11.123076983531352 -6.5274531615143685 5.457907398544333 1.0941175048512335 0.9131585894450964 0.24768222561301323 0.10387267250117421 0.1144564552042382 11.265661797370223 0.012528453787356557 0.027587925420198115 2.9685668849469e-07 6.5274531615143685 -0.18095891540613707 RRGSS(ph)GSVDETLFALPAASEPVIR ddPTM_A549_PD325901_60min_R1 2 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RRGS(0.25)S(0.375)GS(0.375)VDET(0.001)LFALPAASEPVIR;RRGS(0.214)S(0.299)GS(0.299)VDET(0.188)LFALPAASEPVIR 142.65 2.5168e-28 103110800.0 1862.33 1679.19 1710.1000000000001 1908.02 2038.98 1723.75 1593.3 1841.91 1973.54 1938.8700000000001 2197.22 True False 2051.3923706251135 1820.7012344178167 1826.1576696666912 2025.8740619721777 1895.7690788991347 1709.7123515074911 1653.9339033872152 1805.171660099558 1890.5989769702192 1816.4494173103765 1926.975869325166 1.064565676862118 0.9448490058442885 0.9476806112295626 1.0513230052442983 0.9838053029501816 0.8872515627848722 0.8583054566046169 0.9367899665145967 0.9811222896280034 0.9426425344633421 1.0 10.912122790170713 -4.078001656525006 15.762366960355378 0.974909852572015 0.9685984200897236 0.0 0.06033567329259416 0.0 0.0 0.008047079469971578 0.0 8.35599831005269e-05 4.078001656525006 -0.006311432482291379 RRGSSGS(ph)VDET(ph)LFALPAASEPVIR ddPTM_A549_PD325901_60min_R1 1 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RRGS(0.322)S(0.349)GS(0.405)VDET(0.925)LFALPAASEPVIR 62.284 0.011287 16324000.0 601.64 383.34 586.6 506.8 646.09 639.2 678.45 600.4 519.79 587.04 639.22 True False 662.7180498960407 415.645407131847 626.4102035123566 538.1038849736899 600.7108672894985 633.9945671260848 704.2687860120851 588.4245509953116 497.9450339184158 549.9741942151268 560.5999923494379 1.1821585068501923 0.7414295626189794 1.1173924581895058 0.9598713740942658 1.0715499027603597 1.130921469458205 1.2562768384290208 1.04963353375954 0.888235891391223 0.9810456684278943 1.0 9.130827914456534 -8.675387481607961 8.04784696595806 0.9473181986578455 1.0606300951442738 0.12073436327314957 0.1282144411399247 0.3719079870037451 30.664619976631837 0.021710450363995677 0.024603996127453995 2.1116042060610374e-09 8.675387481607961 0.11331189648642825 RRHES(ph)EEGDSHR ddPTM_A549_MK2206_60min_R1 3 RRHESEEGDSHR 12 2 H0Y8P7;Q6UN15;Q6UN15-5;Q6UN15-3 H0Y8P7;Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 RRHES(1)EEGDSHR;RRHES(1)EEGDSHR;RRHES(1)EEGDSHR 112.5 1.0095e-05 37014900.0 454.28000000000003 279.38 129.37 105.85 163.47 177.74 185.64 232.33 0.0 317.41 489.086 True False 530.9513579203386 293.59924867153774 147.71661132211082 131.78325475178704 139.42377954739956 196.54832882573677 219.36838503691823 265.26348898078453 0.0 245.70686054918121 367.63244811309414 1.444245089478617 0.7986216945170691 0.40180515098783937 0.3584646987179075 0.3792477521040495 0.5346327013149638 0.5967057210614726 0.7215453650576077 0.0 0.6683492216486692 1.0 8.522120297712567 -5.336705867764738 2.671371046249919 0.510053866317112 1.550554867238247 0.5566775858871575 0.24039367803390432 0.3063073472601964 3.1536283360605073 0.048009649789307135 0.6476004556968693 4.6056839460039936e-06 5.336705867764738 1.040501000921135 RRHES(ph)EEGDSHR ddPTM_A549_PD325901_60min_R1 8 RRHESEEGDSHR 12 2 H0Y8P7;Q6UN15;Q6UN15-5;Q6UN15-3 H0Y8P7;Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 RRHES(1)EEGDSHR;RRHES(1)EEGDSHR;RRHES(1)EEGDSHR;RRHES(1)EEGDSHR;RRHES(1)EEGDSHR;RRHES(1)EEGDSHR;RRHES(1)EEGDSHR;RRHES(1)EEGDSHR 158.35 1.4961e-14 159393500.0 586.78 537.63 1121.53 1272.73 1420.84 979.28 844.2660000000001 1051.924 1309.4500000000003 1202.06 1047.899 True False 646.3494736353945 582.9379669126494 1197.643770107762 1351.3436415204503 1321.0451000319013 971.3050683592497 876.3950046300821 1030.942550601586 1254.4183702350365 1126.1617264551564 919.014066179068 0.7033074872539052 0.6343079919726333 1.3031832854170957 1.4704275932781465 1.4374590647174037 1.056899022664135 0.9536252347842936 1.1217919165131787 1.3649610124581224 1.2254020562898829 1.0 9.843943132955502 -5.756464357109809 24.99888267227992 1.1939943299437061 0.6688075102886467 0.6176406364131755 0.16504234469199133 71.25522552487573 358036.01416981145 0.027103588576622872 0.09874641836046004 1.7520062168384485e-06 5.756464357109809 -0.5251868196550594 RRHS(ph)DENDGGQPHK ddPTM_A549_MK2206_60min_R1 3 RRHSDENDGGQPHK 14 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RRHS(1)DENDGGQPHK;RRHS(1)DENDGGQPHK;RRHS(1)DENDGGQPHK 129.25 2.7713000000000006e-09 109984300.0 4037.71 3641.7000000000003 3785.9300000000003 2017.1000000000001 3132.1400000000003 2567.9500000000003 2412.33 1968.15 3298.66 4282.719999999999 3642.25 True False 4719.1767354682825 3827.046975041661 4322.831802602757 2511.2895905510613 2671.40635512077 2839.688764532747 2850.6191352947035 2247.141289706587 2551.518776877597 3315.2505775217815 2737.778804013849 1.7237246225113265 1.3978656600857744 1.5789558295451287 0.9172726397286981 0.9757568256442886 1.0372235917560206 1.041216014644945 0.8207899361380329 0.931966736369214 1.210927110934347 1.0 11.418790174923585 -6.2603410422892685 24.999947407528413 0.9647707926238696 1.5499504330619547 0.8252696408080731 0.11727173440412003 20.206296335366527 459919.95393809734 0.01193145343106596 0.02974492515303816 5.491095004058507e-07 6.2603410422892685 0.5851796404380851 RRHS(ph)DENDGGQPHK ddPTM_A549_PD325901_60min_R1 4 RRHSDENDGGQPHK 14 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RRHS(1)DENDGGQPHK;RRHS(1)DENDGGQPHK;RRHS(1)DENDGGQPHK;RRHS(1)DENDGGQPHK 126.63 4.51e-08 132016700.0 6273.1900000000005 6558.3 6794.852 6240.51 7297.6 5981.049999999999 5694.41 6331.18 7734.93 9818.52 10422.869999999999 True False 6910.039630721606 7110.99095735585 7255.991517484388 6625.972129473482 6785.041751353282 5932.342311810808 5911.113888650716 6204.899648185371 7409.857791043642 9198.576971560891 9140.923066016683 0.755945497059388 0.7779291988346849 0.7937919907082549 0.7248690402074311 0.7422709612969078 0.6489872268880094 0.6466648768357469 0.6788044930881652 0.81062467515905 1.0063072301481837 1.0 13.15812414310994 -9.792671667281633 0.8325806313931727 0.9778156739821047 0.7239609291387554 0.8003541405841508 0.052345215128854386 0.19274554120499565 0.27830315154783025 0.02288203054830953 0.012564625355045645 1.6118637662683875e-10 9.792671667281633 -0.25385474484334924 RRHS(ph)DENDGGQPHKR ddPTM_A549_PD325901_60min_R1 2 RRHSDENDGGQPHKR 15 3 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RRHS(1)DENDGGQPHKR;RRHS(1)DENDGGQPHKR 69.52199999999999 0.00052798 22814000.0 590.1 696.38 992.28 565.5799999999999 876.95 824.0799999999999 390.85 767.96 1090.76 1129.52 1204.59 True False 650.0065175913403 755.0663865458224 1059.6220878643728 600.5145920746239 815.3560573132623 817.3689657028533 405.72401063132656 752.6424353470344 1044.9191504200755 1058.2019144349108 1056.4330665251548 0.6152841464243044 0.7147318750911547 1.0030186686125866 0.5684360051790608 0.771800962265552 0.7737063441145051 0.3840508438133651 0.7124374077220472 0.9891011399870783 1.001674358713112 1.0 10.044985648573622 -8.755261625934216 6.363311931013858 0.9953200680871979 0.6941779841780895 0.47127068738877775 0.14349902400093031 0.0932789129751904 15.419272774285286 0.024207605832357475 0.026687747629053495 1.75686493160454e-09 8.755261625934216 -0.30114208390910835 RRHS(ph)EVETDSK ddPTM_A549_MK2206_60min_R1 4 RRHSEVETDSK 11 2 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RRHS(0.995)EVET(0.004)DS(0.001)K;RRHS(0.996)EVET(0.004)DSK;RRHS(1)EVETDSK;RRHS(0.999)EVET(0.001)DSK 139.77 1.5015999999999999e-09 166843200.0 1964.17 2521.27 2657.88 2934.45 4579.02 3478.7499999999995 4361.3 4333.47 5878.099999999999 5618.51 6545.92 True False 2295.673876654027 2649.591873785124 3034.8073502420325 3653.390381732465 3905.452223791115 3846.869015992641 5153.691756418398 4947.752643195286 4546.719735396856 4349.284688775337 4920.387405798705 0.46656364373841014 0.5384925322470675 0.6167821961875389 0.7425005554292174 0.7937286033999106 0.7818223848510554 1.0474158498870927 1.0055616021950489 0.9240572663116974 0.8839313513504403 1.0 12.26455619502767 -6.391735243226671 0.6181448189542408 0.9756870916354256 0.40851058288995656 0.8962819628788374 0.060071544647204156 0.2547759559285896 0.13524782419386544 0.010648006155797292 0.07918046577519225 4.0575581895656407e-07 6.391735243226671 -0.567176508745469 down RRHS(ph)EVETDSK ddPTM_A549_PD325901_60min_R1 4 RRHSEVETDSK 11 2 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RRHS(1)EVETDSK;RRHS(0.996)EVET(0.003)DSK;RRHS(0.999)EVET(0.001)DSK;RRHS(1)EVETDSK 131.66 1.6904999999999998e-08 262392000.0 4727.08 4681.21 4741.96 4543.9400000000005 4973.34 4807.47 4789.7 4684.62 4629.1900000000005 5791.08 5660.650000000001 True False 5206.96968170763 5075.711995407925 5063.777921321948 4824.608853763511 4624.0297554915805 4768.319558231601 4971.974654524409 4591.181579086706 4434.641242741859 5425.430220488102 4964.4259358168465 1.048856352985529 1.0224167025613542 1.020012784315767 0.9718362034480973 0.9314329220082811 0.9604976728184428 1.0015205622573802 0.9248162100602016 0.8932837955638033 1.0928615494785103 1.0 12.277411185208686 -6.273012073216684 2.2823086882410935 0.9502910604590755 1.0346746500516806 0.12303471961449863 0.052381446193665526 0.2354709848039742 2.370515605357804 0.006033660939693518 0.018378616917583634 5.333200691922715e-07 6.273012073216684 0.08438358959260506 RRHS(ph)EVETDSKK ddPTM_A549_MK2206_60min_R1 2 RRHSEVETDSKK 12 3 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RRHS(1)EVETDSKK;RRHS(1)EVETDSKK 81.619 0.0001256 16512400.0 829.14 959.36 1074.77 1146.0700000000002 1222.12 934.9000000000001 1358.3 1029.3 2091.7 1905.31 2115.67 True False 969.0785614732538 1008.1873262421303 1227.1885471953706 1426.8572014490371 1042.3477669325748 1033.830497463606 1605.0855278800154 1175.2064270990463 1617.9332897585273 1474.8991477047364 1590.2907494784758 0.6093719414459626 0.6339641518840237 0.77167558674275 0.8972303975967693 0.6554447778020498 0.6500889839185967 1.0093031908827939 0.7389884066699417 1.0173820669516669 0.9274399339796315 1.0 10.635074839155147 -8.220638140128974 0.8469683595304319 1.0128437367555607 0.7047829980245283 0.4678474010474285 0.11374585290236326 0.2835325079151444 0.4047760001146477 0.023157347675455308 0.031821337011666055 6.016748520822877e-09 8.220638140128974 -0.30806073873103246 RRHS(ph)EVETDSKK ddPTM_A549_PD325901_60min_R1 2 RRHSEVETDSKK 12 3 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RRHS(1)EVETDSKK;RRHS(0.996)EVET(0.004)DSKK 103.39 3.4173e-05 29792000.0 2042.38 2169.7 1763.1599999999999 1972.96 2565.81 2177.7200000000003 2135.23 2279.03 2058.7200000000003 2520.9300000000003 2608.65 True False 2249.72091407931 2352.548233562811 1882.8186403423892 2094.825258282736 2385.5963571639663 2159.985370340764 2216.487346092689 2233.5729587855512 1972.1991577916501 2361.7580495753937 2287.802587594822 0.9833544757218117 1.0283003639907833 0.8229812530817205 0.9156494837629482 1.042745720325439 0.9441310111514329 0.9688280615255764 0.9762961939533942 0.8620495354299921 1.0323259805638745 1.0 11.159746853305737 RRHT(ph)MDKDSR ddPTM_A549_MK2206_60min_R1 2 RRHTMDKDSR 10 3 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 RRHT(0.999)MDKDS(0.001)R;RRHT(1)MDKDSR 63.76 0.0015260999999999999 40622000.0 393.11 575.45 854.47 446.63 996.87 868.81 1047.69 691.65 1914.82 2870.3999999999996 3383.5 True False 459.45735738325334 604.7379470543218 975.6466945690962 556.0543700499825 850.2317435457038 960.7468975305974 1238.041711480979 789.69350558929 1481.1163273392094 2221.9746464206214 2543.2835701505555 0.18065518244827677 0.23777841926550208 0.38361695330392925 0.21863640239576806 0.334304736414183 0.3777584650042479 0.4867887033956227 0.31050155588530864 0.582363816887132 0.8736637441844861 1.0 11.312476612770313 -9.85560953111556 0.310178611602824 1.1612409792511078 0.21151546366145857 0.8999000394617114 0.08062510571486772 0.35516214046084044 0.06957794660932579 0.12337675107378775 0.0418369730393649 1.3944099365298853e-10 9.85560953111556 -0.9497255155896492 RRHT(ph)MDKDSR ddPTM_A549_PD325901_60min_R1 4 RRHTMDKDSR 10 3 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR 65.043 0.001376 386802000.0 8821.96 11519.27 12368.27 11933.92 13200.4 15189.880000000001 12768.32 12828.81 13577.52 13602.29 13058.91 True False 9717.558884816299 12490.03930978158 13207.65517864945 12671.05113450122 12273.249442907789 15066.178653468667 13254.225404692797 12572.929320543248 13006.90405149767 12743.439088018667 11452.746857251024 0.8484915458219411 1.090571499174787 1.153230342316293 1.1063766005164828 1.0716424274354133 1.3155078725877791 1.1572966354618421 1.0978090651312185 1.135701697908626 1.1126971762193865 1.0 13.483406039187177 -5.26272359763848 6.080687827174508 1.0989927887105293 0.8421884461766291 0.4900696302331793 0.0770850351825179 0.10099874852587938 18.596241948712287 0.012307558409211891 0.10691763699529411 5.461053137557333e-06 5.26272359763848 -0.25680434253390017 RRKDS(ph)AQDDQAK ddPTM_A549_MK2206_60min_R1 2 RRKDSAQDDQAK 12 3 Q13045-3;Q13045;Q13045-2;J3KS54 Q13045-3 FLII Protein flightless-1 homolog 1 RRKDS(1)AQDDQAK;RRKDS(1)AQDDQAK 100.41 7.1711e-05 82064000.0 3025.3700000000003 2436.16 1908.24 1415.94 948.67 691.89 679.0 589.1800000000001 1070.92 5964.099999999999 5838.5 True False 3535.978492804997 2560.150138319327 2178.857125989832 1762.845363563961 809.1218996955497 765.1053405605883 802.3655108816395 672.6980692880759 828.358329907828 4616.805667752659 4388.639315597465 0.8057118023433677 0.5833585205374279 0.4964766911343237 0.40168381058309166 0.18436737255209973 0.17433771279434196 0.18282785464505785 0.15328169414544277 0.1887506059027902 1.0519902265251735 1.0 12.099557990498441 -10.788568093575067 1.0366192951719504 0.9998814285591328 0.33702058537549123 0.6170769007720271 0.2027748666629575 0.3183342691196041 0.6074703758285654 0.1531589167128674 0.03851167666245682 1.6271661702212552e-11 10.788568093575067 -0.6628608431836416 RRKDS(ph)AQDDQAK ddPTM_A549_PD325901_60min_R1 2 RRKDSAQDDQAK 12 3 Q13045-3;Q13045;Q13045-2;J3KS54 Q13045-3 FLII Protein flightless-1 homolog 1 RRKDS(1)AQDDQAK;RRKDS(1)AQDDQAK 160.8 1.5788e-14 170246000.0 4656.1 5353.9 3683.9 3837.2 3197.7 3635.8 2567.05 3655.3 2890.0 6419.1 7292.8 True False 5128.783844360344 5805.091942513685 3933.911607090301 4074.215129086509 2973.1045834661268 3606.1912502456503 2664.7404924936604 3582.392173972624 2768.5433502457195 6013.796930509541 6395.831832868154 0.8018947305655449 0.907636738145825 0.6150742717896279 0.6370109839581981 0.4648503370878756 0.5638345948549566 0.4166370477096614 0.5601135657699323 0.4328668142927377 0.940268144575763 1.0 12.64291629085421 -10.91636486310578 1.1724135698702183 0.9998221760650834 0.5853129107245848 0.49652320248570525 0.14282749210783546 0.3330827424603362 0.8138394951886838 0.11105246702340826 0.026347659166842976 1.2123698761886476e-11 10.91636486310578 -0.4145092653404986 RRKEDEVEEWQHR ddPTM_A549_MK2206_60min_R1 1 RRKEDEVEEWQHR 13 3 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 61.375 0.0014273 3313300.0 343.24 310.06 276.03 200.27 184.59 0.0 96.493 94.164 205.34 358.23 305.88 False True 401.17052058769264 325.84072962666244 315.17520463200293 249.33615899046194 157.43705552489442 0.0 114.02452907437701 107.51203536515563 158.8308178605996 277.3055941984598 229.92155414146654 1.7448147568664212 1.4171821813024914 1.3707945121059915 1.084440125335313 0.6847424814640313 0.0 0.4959279676937979 0.4676031169265907 0.6908043852333823 1.2060878556337469 1.0 7.844997908529379 -6.355703980673834 1.9857786217016886 0.7201258467211917 1.5527123559279297 0.6041161141823719 0.30499054086526456 0.20284113612931198 1.5384081217131707 0.047447318854533745 0.1440303680095624 4.4085525233180565e-07 6.355703980673834 0.8325865092067379 RRKEDEVEEWQHR ddPTM_A549_PD325901_60min_R1 2 RRKEDEVEEWQHR 13 3 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 84.71799999999999 6.6659e-05 9769500.0 1235.83 979.04 910.86 846.1899999999999 968.54 1778.15 930.34 980.44 1977.3200000000002 1486.5 1758.85 False True 1361.2905518300386 1061.5471367411792 972.6764370461391 898.457234463075 900.5130916816094 1763.6693359437534 965.7445978015825 960.8843550596994 1894.2201167155233 1392.6421363123225 1542.5226002687796 0.8825093075413211 0.6881890330528759 0.6305751610230238 0.5824596892820382 0.5837924783239467 1.1433669339019341 0.6260813278413584 0.6229304873019483 1.2280015322857905 0.9028341860726443 1.0 10.591075911836995 -8.759167314153803 24.99993355287095 1.1076673983590142 0.7178059129625671 0.38975912432618065 0.17540553002028697 34.775358894908976 382638.866272072 0.029565792339180035 0.032743876143776704 1.741135962695716e-09 8.759167314153803 -0.38986148539644705 RRKGS(ph)GS(ph)EQEGEDEEGGER ddPTM_A549_MK2206_60min_R1 1 RRKGSGSEQEGEDEEGGER 19 3 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 RRKGS(1)GS(1)EQEGEDEEGGER 40.179 0.034319999999999996 2212500.0 115.74 0.0 155.92 0.0 162.32 151.39 0.0 0.0 252.6 121.49 236.66 True False 135.27408242867833 0.0 178.0318005514687 0.0 138.44294302400377 167.40998931545116 0.0 0.0 195.38650331931166 94.04532462153057 177.8907905162791 0.760433308751299 0.0 1.000792677545478 0.0 0.7782468256069422 0.9410829466190447 0.0 0.0 1.0983508632023955 0.5286688779592797 1.0 7.474848013362312 -8.787578949972689 24.99747500597909 1.0464435983706086 0.4387262839012842 0.1551170578916622 0.40786761836275803 167.98035404021272 160640.1283523257 0.0619706810151225 0.06598286336904437 1.6308764068378295e-09 8.787578949972689 -0.6077173144693244 RRKGS(ph)GS(ph)EQEGEDEEGGER ddPTM_A549_PD325901_60min_R1 1 RRKGSGSEQEGEDEEGGER 19 3 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 RRKGS(1)GS(1)EQEGEDEEGGER 45.011 0.013411000000000001 5213200.0 244.74 0.0 93.001 257.57 220.49 343.96 164.95 333.3 233.07 175.6 250.19 True False 269.5858246319345 0.0 99.31260712044435 273.4795139160876 205.003543049206 341.1589037995745 171.22726251410344 326.6520700312083 223.27487842275758 164.51258603191647 219.41821608508167 1.2286392143822726 0.0 0.4526178769128944 1.2463847295615744 0.9343050303978124 1.5548340055197907 0.7803694040047628 1.4887190127575627 1.0175767646209486 0.7497672206400814 1.0 7.777539492930092 -6.253707277385724 24.40224447669434 1.0730079610839804 0.5043770671016354 0.2994582137566544 0.36111263572189845 332.8806940954459 1050554.7825636433 0.04325895498947229 0.11206894713283966 5.575614291552235e-07 6.253707277385724 -0.568630893982345 RRKS(ph)QLDSLK ddPTM_A549_MK2206_60min_R1 2 RRKSQLDSLK 10 3 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 RRKS(0.976)QLDS(0.024)LK;RRKS(0.993)QLDS(0.007)LK 58.831 0.0030662 40006000.0 11201.7 12093.3 11131.599999999999 9442.0 13765.400000000001 11266.7 9904.0 9585.0 14259.400000000001 15497.6 13418.400000000001 True False 13092.273104728933 12708.797315339354 12710.228264614732 11755.290423867487 11740.527894915122 12458.934715769821 11703.428600547495 10943.703102831405 11029.668667582717 11996.681396449343 10086.24095099991 1.2980329508617396 1.260013257375083 1.2601551287900463 1.1654778505665297 1.164014220159118 1.2352406388362842 1.160336011939836 1.0850130545162604 1.0935361073730128 1.1894105499492393 1.0 13.3001009750238 -3.813740124818486 0.0966274587421583 0.8632747711003973 1.850344814911893 0.4249962637950535 0.06435137749195335 15.702323460231431 0.1557652500899991 0.2727975332602978 2.079705395315158 0.0001535535548951875 3.813740124818486 0.9870700438114958 RRKS(ph)QLDSLK ddPTM_A549_PD325901_60min_R1 2 RRKSQLDSLK 10 3 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 RRKS(0.997)QLDS(0.003)LK;RRKS(0.998)QLDS(0.002)LK 69.314 0.0010796 41460000.0 10938.9 11985.5 11087.8 11909.0 13376.2 12992.2 11925.2 13297.3 13516.5 15224.1 15481.5 True False 12049.409075207439 12995.560148115905 11840.28478435783 12644.591882698634 12436.701857384875 12886.395830750185 12379.02001171983 13032.074919969944 12948.4485098949 14262.847727838835 13577.37364531433 0.8874624349287018 0.9571483033171725 0.8720600238061516 0.9312988073405782 0.9159873022774835 0.949108138833418 0.9117389220552192 0.9598376873473926 0.9536784394501453 1.0504865005877677 1.0 13.728916816766516 -9.471254063047791 0.24072679111086215 1.0230788291910542 0.8986181309016873 0.665907408488867 0.02776154655688313 1.1021697434698907 0.1754329240738035 0.048326200800826134 0.024437081900357017 3.3786712550903403e-10 9.471254063047791 -0.1244606982893669 RRLEDQAATPTGLGSLTPSAAGSTASLVGVGLPPPT(ph)PR ddPTM_A549_PD325901_60min_R1 2 RRLEDQAATPTGLGSLTPSAAGSTASLVGVGLPPPTPR 38 2 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 RRLEDQAATPTGLGSLTPSAAGS(0.001)T(0.001)AS(0.001)LVGVGLPPPT(0.997)PR;RRLEDQAATPTGLGSLTPSAAGS(0.027)T(0.027)AS(0.022)LVGVGLPPPT(0.925)PR 75.759 4.6467e-06 7885500.0 2170.2 2030.43 1848.6100000000001 1908.79 2436.3 2113.5 1666.92 2419.09 1995.27 2631.2 2258.6 True False 2390.517106383201 2201.541461894705 1974.0677911949824 2026.6916231233795 2265.1826927787233 2096.2883567286904 1730.3555527736235 2370.8393522106085 1911.4157406383297 2465.065582956598 1980.8065184450422 1.2068402865817438 1.1114369027939905 0.9965979881491153 1.0231648594908491 1.1435658514274882 1.0583004130935023 0.8735611159700616 1.196906073426973 0.9649684221247489 1.2444757021961466 1.0 10.951872251960618 -2.0000000000000004 0.34533838070199974 0.9927768353890624 3.1427609211225835 0.0 0.11383202640093731 46.40562587258549 0.5722626102581849 0.02179938242112266 65.6839524510223 0.00999999999999999 2.0000000000000004 2.149984085733521 RRLEEQAAQHK ddPTM_A549_MK2206_60min_R1 2 RRLEEQAAQHK 11 2 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 55.426 0.005051 15964100.0 230.31 347.12 407.99 542.42 818.6800000000001 353.72 296.682 271.32 657.8199999999999 791.71 913.48 False True 269.18069746111024 364.78692533060405 465.8491168996518 675.312924350159 698.2532564988386 391.1504156196669 350.5852790859887 309.78044088265176 508.82482032268257 612.8621611335249 686.6377052345583 0.39202725893003065 0.5312655022432701 0.6784496588932817 0.9835069050271122 1.0169165648430454 0.569660554085139 0.5105826208105296 0.4511555927107578 0.7410382745422724 0.892555355555618 1.0 9.423405271744135 -9.985143389430917 0.9350066630468095 0.9710386540572865 0.6603425296959553 0.2505876216212446 0.19317478283189632 0.5073020651202138 0.899251940473637 0.0802953538744264 0.04119996579491381 1.0348004539658785e-10 9.985143389430917 -0.3106961243613312 RRLEEQAAQHK ddPTM_A549_PD325901_60min_R1 2 RRLEEQAAQHK 11 2 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 54.143 0.0057688999999999995 10827500.0 806.06 547.0899999999999 502.15 654.71 791.56 908.23 653.58 857.69 570.06 777.19 874.7 False True 887.8906178099904 593.1951943125218 536.2289186732521 695.1499497457072 735.9635563337538 900.8336760026965 678.4523445526987 840.582700105211 546.1023606370496 728.1180907639251 767.117445180147 1.1574376562398232 0.7732781962391927 0.6990180213504675 0.906184514657284 0.9593883713085457 1.1743099855995949 0.8844178278247518 1.0957679366916386 0.7118888562217549 0.9491611686564325 1.0 9.58330366008171 -5.244032245099776 23.60440654270068 0.8907840749908532 1.1574381310963349 0.1733606988533144 0.14311817989416856 2167.0666006998144 2938482.194591483 0.02166501080444405 0.8294971049983542 5.701219408164651e-06 5.244032245099776 0.26665405610548165 RRLS(ph)ELLR ddPTM_A549_PD325901_60min_R1 1 RRLSELLR 8 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 RRLS(1)ELLR 42.001000000000005 0.027399 3814200.0 513.5 587.58 377.65 463.19 581.49 335.8 534.1 610.44 597.4 647.73 695.14 True False 565.6301419812795 637.0974287121892 403.27959999393335 491.8001943191856 540.648148431597 333.06535613413524 554.4254677707345 598.2642953190839 572.2933555144608 606.8322172577064 609.6421868555242 0.9278067597302369 1.0450350097952974 0.6615021215543018 0.8067030217443509 0.8868286350395272 0.5463292457696446 0.9094276605600538 0.9813367713361072 0.9387364717430317 0.9953907887964392 1.0 9.251818929648897 -7.991600801215208 24.946744984672115 0.9698102819563377 0.8116016806560977 0.28374222111174574 0.12403862905596374 194.06511361700416 576396.1936734538 0.01910834258580373 0.026378557132878927 1.0195280966679479e-08 7.991600801215208 -0.15820860130023995 RRLS(ph)EQLAHTPTAFK ddPTM_A549_MK2206_60min_R1 1 RRLSEQLAHTPTAFK 15 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RRLS(0.998)EQLAHT(0.002)PTAFK 45.916000000000004 0.007671600000000001 6038000.0 2610.4 3055.1 2945.2 2849.2 4016.1 2646.3 2485.9 3418.2 3368.7 4360.1 4147.2 True False 3050.9717018474316 3210.5915406128383 3362.873646640492 3547.2541279054494 3425.3370100955012 2926.3297095282287 2937.5558519891983 3902.740317798469 2605.694828708492 3375.1503817790376 3117.3357831028175 0.9787112823664665 1.0299152109360512 1.0787652921025017 1.1379121065920963 1.0988027111683545 0.9387277833174351 0.9423289810202363 1.2519473644619397 0.8358723634561217 1.0827035060110228 1.0 11.606097847558008 -8.805940373307783 24.99999901207241 0.9224953210601615 1.053260513751009 0.06076230527740489 0.10447730613449063 130.48780450016642 73305.49977862297 0.017471415656879707 0.018599781806089503 1.5633622705625426e-09 8.805940373307783 0.1307651926908474 RRLS(ph)EQLAHTPTAFK ddPTM_A549_PD325901_60min_R1 1 RRLSEQLAHTPTAFK 15 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RRLS(0.999)EQLAHT(0.001)PTAFK 60.528 0.0011427 6649800.0 1378.6 1583.4 1660.4 1349.9 2060.5 1964.0 1506.8 2083.9 1884.2 2160.7 2236.5 True False 1518.554457128319 1716.8386749427825 1773.0847287963122 1433.2802571546636 1915.7775883391046 1948.0058351621237 1564.1420985525979 2042.3349797120761 1805.0136264820003 2024.2730332526312 1961.4246783416013 0.7742099270476538 0.8753018629266875 0.9039779851732406 0.7307342835955916 0.9767275845427357 0.9931586242756856 0.7974520336284804 1.0412507817730146 0.9202564066891176 1.0320421964733149 1.0 10.937686219480874 -2.000000000035453 0.14284434550278347 1.010878785897165 0.2824006921506731 0.3920369243193209 0.08009252824311079 55.01432038165082 0.4977949893534661 0.1553176888543406 8.284198689689703 0.009999999999183665 2.000000000035453 -0.728478093746492 RRLS(ph)ESSALK ddPTM_A549_MK2206_60min_R1 3 RRLSESSALK 10 2 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RRLS(0.997)ES(0.003)SALK;RRLS(0.999)ES(0.001)SALK;RRLS(0.999)ESSALK 88.075 0.00023355 37684200.0 6687.400000000001 7317.1 6379.5 5360.3 8839.3 6667.2 6929.1 6682.700000000001 8831.8 9658.7 10448.2 True False 7816.069628767443 7689.509136138988 7284.209027822572 6673.573740633013 7539.050679349901 7372.718678670822 8188.02777827683 7629.993189910424 6831.411401486531 7476.792961741519 7853.623584349646 0.9952182638779583 0.9791033468248086 0.9274965816210268 0.8497445375319255 0.9599455077492366 0.9387664941521834 1.042579605494917 0.9715251957217732 0.8698419688842569 0.9520182475565727 1.0 12.939142737516685 -5.628440929366377 5.076291874048976 0.9415584477786845 0.991330855830667 0.08689783805556128 0.05115019436657602 0.39900019551655785 15.824293563180841 0.008387537381611595 0.034738645562052105 2.3526594689827605e-06 5.628440929366377 0.049772408051982575 RRLS(ph)ESSALK ddPTM_A549_PD325901_60min_R1 2 RRLSESSALK 10 2 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RRLS(0.998)ES(0.002)SALK;RRLS(0.99)ES(0.01)SALK 86.291 0.00025396 51577000.0 6764.0 6937.5 7106.299999999999 7435.9 8055.0 7126.3 7652.299999999999 8005.9 8110.6 9010.2 8920.8 True False 7450.676300606381 7522.147472158364 7588.576251653355 7895.198654845814 7489.244588241431 7068.265775517239 7943.512463999234 7846.216043992953 7769.739687371258 8441.294434309651 7823.598153610437 0.9523337158067149 0.9614690484437829 0.9699598704659155 1.0091518633536074 0.9572634536176032 0.9034546044846862 1.0153272583834663 1.0028909831433608 0.9931158956298995 1.078952966214677 1.0 12.933616555171826 RRLS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 RRLSPEK 7 2 Q9NQT8;E7ERX9 Q9NQT8 KIF13B Kinesin-like protein KIF13B;Kinesin-like protein 1 RRLS(1)PEK 47.187 0.019728 8096800.0 1873.8 2092.5 2093.5 2014.2 2516.6 2082.4 1825.3 2003.6 2755.2 2574.5 3391.6 True False 2190.0516299884002 2198.9993122098685 2390.3897797235763 2507.6790904208733 2146.41147371986 2302.758185814754 2156.9333829341035 2287.616435767658 2131.1515991503074 1992.9186619320972 2549.372116601928 0.8590553006077166 0.8625650598002643 0.9376386303737172 0.9836457667715345 0.8419372988910006 0.9032648356114105 0.8460645540475635 0.8973254319643357 0.8359515604928365 0.7817292144029837 1.0 11.315926254959777 -10.944705082999029 1.1939571196508227 1.0002630247601874 0.8828560921083143 0.0 0.07698746650099832 0.3315994353584274 0.83706032159767 0.031966054320851645 0.007402924625336911 1.1357818309158073e-11 10.944705082999029 -0.11740693265187307 RRLS(ph)PEK ddPTM_A549_PD325901_60min_R1 1 RRLSPEK 7 2 Q9NQT8;E7ERX9 Q9NQT8 KIF13B Kinesin-like protein KIF13B;Kinesin-like protein 1 RRLS(1)PEK 45.137 0.024207 5080200.0 1876.5 1561.3 1879.2 1826.8 2032.4 1715.3 2351.3 2124.7 1601.4 2358.5 2000.3 True False 2067.0008985937134 1692.8762303828266 2006.7338125475976 1939.6372870361813 1889.6512353993653 1701.3311655059013 2440.7800081807286 2082.3211917050944 1534.0987270185092 2209.5839074958726 1754.2757809464367 1.1782645129368203 0.9650000580122671 1.143910116267443 1.1056626946019523 1.0771688556173837 0.9698196737277125 1.3913319870744159 1.186997628492412 0.8744911966981945 1.259541932628059 1.0 10.7766598491658 -8.760903149314816 24.999992870122515 0.9407319510072194 1.1235786696398278 0.0 0.1476857737510423 11.957441480208978 557477.4101006659 0.019918366855674104 0.021921237514810597 1.7341906912011483e-09 8.760903149314816 0.18284671863260837 RRLS(ph)PPSSSAASSYSFSDLNSTR ddPTM_A549_MK2206_60min_R1 1 RRLSPPSSSAASSYSFSDLNSTR 23 2 P50402 P50402 EMD Emerin 1 RRLS(0.967)PPS(0.019)S(0.01)S(0.003)AASSYSFSDLNSTR 49.088 0.0035677 9547300.0 1341.9 1618.1 1478.0 1550.0 2139.3 1307.7 1130.8 1348.8 2543.4 2308.9 2026.0 True False 1568.379913694864 1700.4543785360997 1687.6026245194382 1929.7500695821445 1824.6118039135747 1446.0799460189944 1336.2517226877142 1539.9965305267597 1967.3239609752065 1787.3178863993073 1522.8882852445756 1.0298719406348198 1.1165982396817815 1.1081591741631984 1.2671645637304427 1.1981258386399252 0.9495640356749834 0.8774456640285418 1.0112340776719788 1.2918373462037989 1.1736369001697746 1.0 10.572594398361883 -3.9175022477095522 15.484814807788279 1.1096449984859482 1.1011643319886575 0.0 0.127062534410342 0.0 0.0 0.019548662462824287 0.0 0.00012091989246665777 3.9175022477095522 -0.008480666497290734 RRLS(ph)PPSSSAASSYSFSDLNSTR ddPTM_A549_PD325901_60min_R1 2 RRLSPPSSSAASSYSFSDLNSTR 23 2 P50402 P50402 EMD Emerin 1 RRLS(0.973)PPS(0.009)S(0.012)S(0.005)AASSYSFSDLNSTR;RRLS(0.82)PPS(0.115)S(0.032)S(0.032)AASSYSFSDLNSTR 119.68 4.8677e-16 57775000.0 10305.1 10540.599999999999 9524.2 10535.2 12189.0 11505.5 9312.7 10427.5 13269.599999999999 11995.9 14685.6 True False 11351.266165786343 11428.893354238917 10170.569485667205 11185.935376824817 11332.886689767214 11411.80302263636 9667.099894604971 10219.515332284502 12711.924858277012 11238.4768267669 12879.364299688534 0.8813529846392228 0.8873802377432018 0.7896794631325992 0.8685161096883741 0.8799259362545775 0.8860532831509655 0.7505882797987751 0.7934797940711751 0.9869994017161569 0.8725956161546486 1.0 13.652773766144826 -8.775201709591036 24.41350896495569 0.9938608599885189 0.8424357253344333 0.37932811201328476 0.057151033676143326 68.0925591894354 120791.44675919546 0.007861110542965443 0.008391706106211224 1.678024472770135e-09 8.775201709591036 -0.15142513465408558 RRLS(ph)SLR ddPTM_A549_MK2206_60min_R1 1 RRLSSLR 7 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 RRLS(0.986)S(0.014)LR 45.022 0.024544999999999997 53548000.0 3497.2 3009.0 2072.0 1596.3 1522.9 1264.9 1785.6 1586.5 1609.7 1705.4 1996.0 True False 4087.441861669033 3162.1452475218616 2365.8407564305 1987.39357166063 1298.883427373432 1398.7508784273343 2110.0204068192265 1811.3912334524796 1245.1055201626916 1320.14895554826 1500.338113202455 2.724347149286526 2.1076217551871013 1.5768717301866306 1.3246304644081597 0.865727142397909 0.9322904391475574 1.4063632645546886 1.20732201462648 0.829883283778633 0.8799009662764726 1.0 10.551071944898005 -5.387437029467423 0.808785162597034 0.9648456565230193 3.5767438539958887 0.9092967156478636 0.17136833925165482 0.43404415487205705 0.22798118697914024 0.029402395403890478 0.9720023300345517 4.097915232319614e-06 5.387437029467423 2.611898197472869 up RRLS(ph)SLR ddPTM_A549_PD325901_60min_R1 1 RRLSSLR 7 2 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 RRLS(0.843)S(0.157)LR 53.756 0.014486 45569000.0 3870.3 2889.9 2424.4 2091.2 3478.3 3403.6 1821.4 2093.8 1995.6 2536.2 3293.9 True False 4263.210006835731 3133.4420151049303 2588.934363101529 2220.3686745402133 3233.9962074835744 3375.882210059983 1890.7143737083245 2052.037516445677 1911.7318718859367 2376.0638991694 2888.771181752471 1.4757866714280423 1.0846972009752707 0.8962061029461509 0.7686204738421782 1.1195058396842885 1.1686222264277806 0.6545047200870109 0.7103496218072938 0.6617803043597887 0.8225171706843055 1.0 11.49624021787415 -7.754076344402794 24.99887960758226 0.8117490461850346 1.0640611458422202 0.3987921702949503 0.18888769102341404 190.15353146158202 645604.4085408117 0.03309896723479814 0.04854506231847507 1.761666336774597e-08 7.754076344402794 0.2523120996571856 RRLT(ph)PEQK ddPTM_A549_MK2206_60min_R1 1 RRLTPEQK 8 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 RRLT(1)PEQK 90.15 0.00091281 4636000.0 396.35 578.64 686.07 433.86 757.42 555.05 361.11 551.1 732.81 815.85 964.64 True False 463.2441901728586 608.0903044287302 783.3650423572744 540.1557194767153 646.0045213482067 613.7850225876288 426.7190127164488 629.2201126729666 566.8297050571057 631.5489183675671 725.0932652903895 0.6388753176287412 0.8386373636847926 1.080364526684092 0.7449465404431672 0.8909261087806286 0.8464911370288575 0.5885022425984799 0.8677781780540644 0.7817335123504402 0.8709899106767194 1.0 9.502022763823788 -10.750288201426036 0.9344059725354874 1.003233857828883 0.8131228875169975 0.09655976249171072 0.12916310616012297 0.6949177744110501 1.0477263272345168 0.09080984365209992 0.021677514013437444 1.7770997205187703e-11 10.750288201426036 -0.19011097031188562 RRLT(ph)PEQK ddPTM_A549_PD325901_60min_R1 1 RRLTPEQK 8 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 RRLT(1)PEQK 79.20100000000001 0.0014297000000000001 8503000.0 1588.1 1309.2 1315.8 1534.6 1333.9 1117.2 1358.2 1470.3 1528.9 1682.4 1758.8 True False 1749.3227429025715 1419.5308786377996 1405.0981005481735 1629.388756670529 1240.2114657051834 1108.101893606479 1409.8870442355583 1440.9737130719636 1464.6456498929679 1576.1729768798207 1542.4787499518034 1.1340984392538511 0.9202920161345202 0.9109351429263305 1.0563443786317581 0.804037958865842 0.7183903788892412 0.9140398493526163 0.9341935589822477 0.9495402448420975 1.0218442081805472 1.0 10.59103489880156 -5.2575473645907245 23.623427697495195 0.9406932095996642 1.134098605193287 0.2851721118458127 0.09229589350611521 195.608852104437 1187177.046708504 0.013174040206167494 0.13557785999327754 5.5265313175410435e-06 5.2575473645907245 0.1934053955936229 RRNDLDDPER ddPTM_A549_MK2206_60min_R1 2 RRNDLDDPER 10 2 Q15393 Q15393 SF3B3 Splicing factor 3B subunit 3 0 ; 98.943 0.00016123 12559900.0 278.37 259.41999999999996 218.053 0.0 83.288 79.878 227.697 89.443 233.47 206.0 295.95 False True 325.3520505069223 272.6233699275907 248.97619423838773 0.0 71.03644553094644 88.33063694127488 269.06659754229247 102.12181915769946 180.58941777497904 159.4644569267865 222.45744719552445 1.4625361146977505 1.2255079493381669 1.1192081783603098 0.0 0.3193259943710061 0.39706756530222365 1.2095193976841865 0.45906226312100745 0.8117930869549791 0.7168312813849225 1.0 7.797385586118098 -10.030148002854718 0.969655744793995 0.9788624413686434 0.7600283972125922 0.0 0.43771630581051957 1.506743575961401 2.857693145101688 0.171817628608335 0.08725936371025128 9.329363120278704e-11 10.030148002854718 -0.21883404415605123 RRNDLDDPER ddPTM_A549_PD325901_60min_R1 2 RRNDLDDPER 10 2 Q15393 Q15393 SF3B3 Splicing factor 3B subunit 3 0 ; 87.29799999999999 0.00024243 11302800.0 104.2 145.88 102.8 145.75 309.57 157.48 0.0 113.57 0.0 111.74 358.49399999999997 False True 114.77830729201429 158.17381956590455 109.77662618661817 154.75264647773332 287.82687115852286 156.19753509232757 0.0 111.30475725605855 0.0 104.68471733033232 314.40151068070367 0.3650691978022318 0.5030949731235259 0.3491606193269977 0.4922134316170486 0.9154754712703363 0.4968091112353366 0.0 0.3540210637508551 0.0 0.33296505829021555 1.0 8.296464339452426 -11.037318212768303 1.3545412497961826 0.9975761696901033 0.35234819479909096 0.0 0.3064028689724559 0.3287529577684175 1.0817027963146553 0.19101554842927315 0.043525181581387996 9.17659969642511e-12 11.037318212768303 -0.6452279748910124 RRNDS(ph)YTEEEPEWFSAGPTSQSETIELTGFDDK ddPTM_A549_PD325901_60min_R1 1 RRNDSYTEEEPEWFSAGPTSQSETIELTGFDDK 33 2 B1AKL4;Q9NRA8;Q9NRA8-3 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RRNDS(0.463)Y(0.011)T(0.463)EEEPEWFS(0.014)AGPT(0.012)S(0.012)QS(0.012)ET(0.012)IELTGFDDK 56.711999999999996 0.00069971 2278800.0 634.78 607.28 705.68 469.17 783.78 627.44 385.37 769.68 608.46 962.15 961.48 True False 699.2223982996621 658.4576168493452 753.5716883985672 498.1495653376207 728.7299966942118 622.3303366670688 400.03546623255545 754.3281285977208 582.8885421766471 901.3996847984533 843.2240553238909 0.8292249181993316 0.780880968340526 0.8936790686184974 0.5907677350906176 0.8642186997550719 0.7380367444902001 0.47441182886901606 0.8945761495240737 0.6912617571764527 1.068991899729683 1.0 9.719772214246838 -10.820545301783202 0.9390404905920873 1.008325223375655 0.7464910453871899 0.4225844123994825 0.125658771735304 0.514434111492515 0.7619432903885331 0.0953571959278889 0.020744795839829605 1.5116620078422754e-11 10.820545301783202 -0.2618341779884651 RRNPDS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 RRNPDSPAK 9 2 P82914 P82914 MRPS15 28S ribosomal protein S15, mitochondrial 1 RRNPDS(1)PAK 53.08 0.0074217 5701200.0 1995.9 2073.6 1450.6 1507.4 1654.5 1645.1 1323.8 1342.6 1276.0 1988.4 2143.6 True False 2198.5222986960775 2248.349549299833 1549.0464391664239 1600.5086744462108 1538.29362771514 1631.7028510311661 1374.1779334111557 1315.8207897506759 1222.3741574095282 1862.8520846575339 1879.9507893999794 1.1694573661674283 1.1959619166507198 0.8239824403386805 0.8513566862870077 0.8182627100606791 0.8679497677446939 0.7309648428881214 0.6999229964794154 0.6502160398569109 0.9909047062088775 1.0 10.876479182300205 -5.763376082034214 24.249778681734185 0.8174943777423196 1.1827097739757477 0.6400633010558137 0.10302612881023142 18.013984832422036 225580.72709562705 0.018071336612022162 0.06067769058285009 1.724344030786677e-06 5.763376082034214 0.36521539623342814 RRNS(ph)EPPPAAALPLGR ddPTM_A549_PD325901_60min_R1 1 RRNSEPPPAAALPLGR 16 2 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 RRNS(1)EPPPAAALPLGR 50.358000000000004 0.0069456000000000006 7179800.0 1606.7 1258.4 1292.4 1409.5 1535.3 1320.9 1351.2 1493.2 1265.3 1362.4 1833.2 True False 1769.8110012099753 1364.4497843551835 1380.1100358325427 1496.5616137932425 1427.4658244974637 1310.1430283429986 1402.6206554050113 1463.4169546072605 1212.1238411992763 1276.3778314913623 1607.7280216122615 1.100814924800013 0.8486819698439331 0.8584225797399121 0.9308549665586228 0.8878776791275758 0.8149033982931773 0.8724240894914773 0.9102391293396237 0.7539358802639606 0.7939015892821133 1.0 10.650807651963225 -5.256660091838043 24.39832360504576 0.8783715478502517 1.1008150528307998 0.5092914854654513 0.06509875227410682 301.4980312351883 1539074.5960229791 0.011667994245656645 0.13032491885729086 5.537833678705299e-06 5.256660091838043 0.2224435049805481 RRNS(ph)INR ddPTM_A549_MK2206_60min_R1 7 RRNSINR 7 2 Q12965;H0YNQ8;O00160 Q12965 MYO1E;MYO1F Unconventional myosin-Ie;Unconventional myosin-If 1 RRNS(1)INR;RRNS(1)INR;RRNS(1)INR;RRNS(1)INR;RRNS(1)INR;RRNS(1)INR;RRNS(1)INR 78.934 0.0054332 2525731000.0 16988.8 18974.399999999998 14621.0 11016.090000000002 17999.5 12403.4 14053.3 14301.2 20497.3 28096.5 29461.5 True False 19856.09410371807 19940.1159137849 16694.477654329305 13715.032544531083 15351.797393793475 13715.919555289429 16606.602701138345 16328.438895588155 15854.694277462111 21749.481136133287 22145.396453965008 0.8966240069349921 0.900418105191101 0.753857700810782 0.6193175440792564 0.6932274807410288 0.619357598036303 0.7498896095926532 0.7373288136670337 0.7159363486862941 0.9821220036112366 1.0 14.434719204591577 -10.674581888175839 0.8248206965333658 1.008885238807402 0.737996751966658 0.5442785287671106 0.08714795653471366 0.44287381283117977 0.5084797815162183 0.07622989930472027 0.017756405158620443 2.115524755934433e-11 10.674581888175839 -0.27088848684074407 RRNS(ph)INR ddPTM_A549_PD325901_60min_R1 6 RRNSINR 7 2 Q12965;H0YNQ8;O00160 Q12965 MYO1E;MYO1F Unconventional myosin-Ie;Unconventional myosin-If 1 RRNS(1)INR;RRNS(1)INR;RRNS(1)INR;RRNS(1)INR;RRNS(1)INR;RRNS(1)INR 69.954 0.007101100000000001 3290838000.0 16008.3 16048.2 13402.9 13939.999999999998 15702.800000000001 13625.3 11561.0 12536.9 14836.3 17228.8 19373.8 True False 17633.4508313124 17400.638135162793 14312.501392185066 14801.042139962963 14599.889499719142 13514.340074253812 12000.960181421944 12286.841694492214 14212.781905623031 16140.9706277146 16990.945420636926 1.0378145768095457 1.024112414252609 0.8423605066026129 0.871113512140758 0.8592746982746677 0.7953848205432709 0.7063150333498084 0.7231405545902593 0.8364915285032001 0.9499748382517925 1.0 14.052478509629957 -5.7524794828313714 23.78815359211288 0.8734140586506999 1.030963707856576 0.37905004070867643 0.08586724213439853 115.46156813876922 306531.91809392977 0.015028700213774162 0.05636703423775527 1.7681557479062303e-06 5.7524794828313714 0.15754964920587622 RRNS(ph)KIFLDLDTDDDLNSDDYEYEDEAK ddPTM_A549_MK2206_60min_R1 1 RRNSKIFLDLDTDDDLNSDDYEYEDEAK 28 3 Q92995-2;Q92995 Q92995-2 USP13 Ubiquitin carboxyl-terminal hydrolase 13 1 RRNS(0.95)KIFLDLDT(0.046)DDDLNS(0.004)DDYEYEDEAK 63.403 0.00019526 3373800.0 793.8 996.56 822.01 930.84 1432.7 953.53 619.02 1174.6 1297.0 1303.0 1309.9 True False 927.7740334532989 1047.2806473480834 938.5833784717342 1158.895841786996 1221.951727886214 1054.4319116980123 731.4879212753343 1341.1031470616338 1003.2315708834018 1008.651395027198 984.6156785991461 0.942270221385548 1.0636440898829616 0.9532484591420441 1.1770032378885187 1.2410443530868165 1.0709070905697913 0.7429171982270816 1.3620574770550853 1.0189067599560686 1.024411267208591 1.0 9.943416902389497 -8.972113996416367 24.996145366895686 1.0083409954126226 1.0715313389679646 0.024022059717732303 0.15472596721945905 558.7120660759077 500816.98228280124 0.026029573346555496 0.027256829423314904 1.0663161909424607e-09 8.972113996416367 0.06319034355534203 RRNS(ph)KIFLDLDTDDDLNSDDYEYEDEAK ddPTM_A549_PD325901_60min_R1 1 RRNSKIFLDLDTDDDLNSDDYEYEDEAK 28 3 Q92995-2;Q92995 Q92995-2 USP13 Ubiquitin carboxyl-terminal hydrolase 13 1 RRNS(0.559)KIFLDLDT(0.441)DDDLNSDDYEYEDEAK 89.266 3.5891e-10 6668100.0 953.04 917.76 865.37 998.31 850.69 1087.4 1134.8 1172.4 977.68 1240.5 1432.8 True False 1049.7919192090333 995.1028560790004 924.0992120925467 1059.9733413734887 790.9404691211801 1078.5445749263215 1177.9854349863876 1149.0155622699924 936.5915095737836 1162.1746182949462 1256.574683267536 0.8354393361476973 0.7919170020928505 0.7354112926177725 0.8435418566743563 0.6294416715960381 0.8583211083974144 0.9374575587685813 0.9144029221423974 0.7453528405795319 0.9248750860337911 1.0 10.295280703574873 -7.500943801247491 24.53536907209003 0.8843937918435417 0.768294312450592 0.3971828827582443 0.07928215171387307 718.9763644730934 804212.8630593811 0.015390237689261238 0.02446673093932016 3.1554129149921236e-08 7.500943801247491 -0.11609947939294973 RRNS(ph)VVEIESSQGQR ddPTM_A549_MK2206_60min_R1 1 RRNSVVEIESSQGQR 15 2 Q9Y3M9-2;Q9Y3M9 Q9Y3M9-2 ZNF337 Zinc finger protein 337 1 RRNS(1)VVEIESSQGQR 40.236999999999995 0.035104 3364800.0 827.61 783.56 680.81 807.49 731.49 671.26 638.4 752.4 999.84 1234.7 1191.2 True False 967.2903348781623 823.4398571446424 777.3590952632469 1005.3250862496042 623.8887899989437 742.2922876536738 754.3890164165513 859.0550041283615 773.3778364163924 955.7804124636077 895.392164552487 1.0802979668262003 0.9196415713065726 0.8681772367884942 1.1227762828950612 0.6967771382171527 0.8290136065962429 0.8425235849518423 0.959417602853062 0.863730851166118 1.0674433508599024 1.0 9.806375883255482 -2.519996491164413 17.373240055417625 0.9226670193515064 1.0975338022558632 0.0 0.12279115539047829 0.0 0.0 0.014632628568239147 0.0 0.003019976119875912 2.519996491164413 0.17486678290435675 RRPAS(ph)GDDLSAK ddPTM_A549_MK2206_60min_R1 1 RRPASGDDLSAK 12 2 D6RB33;D6RAL8;D6RDV8;Q92564-2;Q92564;Q92564-3 D6RB33 DCUN1D4 DCN1-like protein;DCN1-like protein 4 1 RRPAS(0.995)GDDLS(0.005)AK 54.7 0.0065799 9821800.0 2177.6 2055.7 1809.0 1300.1 1507.5 1361.5 1649.1 1237.5 1680.3 2315.6 2333.5 True False 2545.1256427915146 2160.3263493953755 2065.543401729136 1618.6245583637074 1285.748746973175 1505.5730263094445 1948.7201237038441 1412.9194146848054 1299.714732887726 1792.5043517459544 1754.027548676318 1.4510180553961087 1.2316376393436193 1.1776003194977778 0.922804524698148 0.733026541084528 0.8583519839500979 1.1109974442388042 0.8055286336586156 0.7409887797193149 1.021936259267235 1.0 10.77645569152489 -5.944173621523257 1.537271413970315 0.8756647046780605 1.4046543984070625 0.6948101376326963 0.1181752939347084 0.1996044150242853 0.8313473850605898 0.01875595734131389 0.10752004063451583 1.137172577982719e-06 5.944173621523257 0.5289896937290021 RRPAS(ph)GDDLSAK ddPTM_A549_PD325901_60min_R1 1 RRPASGDDLSAK 12 2 D6RB33;D6RAL8;D6RDV8;Q92564-2;Q92564;Q92564-3 D6RB33 DCUN1D4 DCN1-like protein;DCN1-like protein 4 1 RRPAS(0.958)GDDLS(0.042)AK 41.202 0.031947 8424200.0 2679.7 2719.9 2720.9 2815.2 2689.5 2762.3 2753.9 2700.6 2925.2 3064.4 3431.6 True False 2951.741171309125 2949.1155184898817 2905.556636100871 2989.0885102169113 2500.598798271303 2739.804744637647 2858.701171491905 2646.734414420285 2802.264016657016 2870.913261026225 3009.5349547046876 0.980796440557962 0.9799239958584449 0.965450370183848 0.9932061116433244 0.8308920932658435 0.9103747874250865 0.9498813652331932 0.8794496339983522 0.9311285825992307 0.9539391647663833 1.0 11.555324857901162 -3.8777421815162216 15.569364410604289 0.9520502535131237 0.9440867692732474 0.0 0.05037028105877536 0.0 0.0 0.007167248576493311 0.0 0.0001325127962627142 3.8777421815162216 -0.00796348423987625 RRPCEQIS(ph)PEEEER ddPTM_A549_MK2206_60min_R1 2 RRPCEQISPEEEER 14 2 P15407 P15407 FOSL1 Fos-related antigen 1 1 RRPCEQIS(1)PEEEER;RRPCEQIS(1)PEEEER 101.92 9.3584e-06 42145000.0 1446.0700000000002 1762.9499999999998 1669.8200000000002 1683.9 1739.8 1436.8400000000001 1390.75 1739.6100000000001 1757.38 1643.1499999999999 2147.05 True False 1690.1312629828828 1852.6766248317256 1906.6255848951628 2096.4555755931437 1483.8777246991237 1588.8854551027987 1643.431272840411 1986.205044832189 1359.3362359591918 1271.961273782763 1613.8782294345351 1.0472483190848079 1.1479655596326246 1.1813937074813876 1.2990171980495036 0.9194483806991061 0.9845138413320729 1.018311817376848 1.230703164964378 0.8422793065592509 0.7881395576098875 1.0 10.656316012956598 -7.506858587867248 0.6769542944783898 0.93879265391199 1.155205828340281 0.2885919959000932 0.1290067414818739 0.6795188509237355 0.6182716352634542 0.02706103128840661 0.06309320730753994 3.112729718833018e-08 7.506858587867248 0.2164131744282911 RRPCEQIS(ph)PEEEER ddPTM_A549_PD325901_60min_R1 2 RRPCEQISPEEEER 14 2 P15407 P15407 FOSL1 Fos-related antigen 1 1 RRPCEQIS(1)PEEEER;RRPCEQIS(1)PEEEER 100.45 1.0344000000000001e-05 42595000.0 3451.2 3212.5 3275.7 3177.0 3621.5 3496.2 3208.3 3341.0 3309.6 3081.0 3895.2 True False 3801.5632833608415 3483.2286492697294 3498.00870038429 3373.2360745094957 3367.1383334967545 3467.7281063614178 3330.393612149124 3274.361134036202 3170.509021444023 2886.46513419325 3416.1150937072202 1.112832319485854 1.0196461634697667 1.0239727305522945 0.9874480168198339 0.9856630239710936 1.0151086866918722 0.9749067349293931 0.9585043373005373 0.9281036892710012 0.8449554698875248 1.0 11.73814086685804 -2.0000000005849112 0.4888059109520919 0.967584613837592 5.0582994972578765 0.5361598933079932 0.042989704570328614 39.715773382478126 0.3880638793440663 0.005582905246760207 167.0903104244055 0.009999999986531921 2.0000000005849112 4.090714883420285 RRPEAS(ph)PVQK ddPTM_A549_MK2206_60min_R1 3 RRPEASPVQK 10 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK 61.48 0.0015404000000000001 153522000.0 5636.990000000001 5693.499999999999 5325.01 4974.299999999999 6843.7 5431.55 4815.15 5352.82 7686.6 8535.0 8020.0 True False 6588.376100826293 5983.274831095287 6080.176489575278 6193.003723304815 5837.000795794573 6006.31301582891 5690.000426688844 6111.598627323734 5945.597372977913 6606.937572185066 6028.412659260369 1.0928873773605647 0.9925124853396117 1.0085866434898734 1.0273025543119738 0.9682483807455078 0.9963340858231542 0.9438637910675071 1.0137989837068604 0.9862625054117287 1.0959663754995292 1.0 12.557562460903029 RRPEAS(ph)PVQK ddPTM_A549_PD325901_60min_R1 5 RRPEASPVQK 10 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK 98.337 0.00014982 306281700.0 25135.100000000002 23771.9 24506.33 25646.94 28329.7 23525.1 23950.170000000002 24313.39 26153.01 27145.5 26114.399999999998 True False 27686.796848517355 25775.241440490314 26169.476922333728 27231.093235373155 26339.919604159328 23333.51938532206 24861.606825385912 23828.44036296452 25053.88993924213 25431.52849731998 22902.494352820886 1.2088987523364323 1.125433808362258 1.1426474566125349 1.1890011985536901 1.150089557861415 1.018820003876481 1.085541445503019 1.0404299198104414 1.0939371735356964 1.110426144224225 1.0 14.483217113001505 -2.0000000000407274 0.08875886113886815 0.9328679456410827 1.6360176664139925 0.4290852320427494 0.048253120730844194 63.013275293663206 0.3909453462685613 0.40384002560443394 5.411268642189468 0.009999999999062216 2.0000000000407274 0.7031497207729098 RRPEAS(ph)PVQKK ddPTM_A549_MK2206_60min_R1 3 RRPEASPVQKK 11 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RRPEAS(1)PVQKK;RRPEAS(1)PVQKK;RRPEAS(1)PVQKK 54.523999999999994 0.0032789 83041000.0 4104.83 4122.549999999999 3589.1 4242.67 5685.610000000001 4066.1499999999996 4110.93 3811.12 6303.839999999999 7132.6 6439.5 True False 4797.624950541831 4332.370186165249 4098.08834889223 5282.124340460691 4849.264300682026 4496.427294108076 4857.832768260173 4351.3579310654995 4876.030305163933 5521.340706194162 4840.394428841291 0.9911640510028232 0.8950448666643774 0.846643472786833 1.0912590736381669 1.0018324688145008 0.9289382012582071 1.0036026690955133 0.8989676347733383 1.00736218439355 1.1406799151109421 1.0 12.240908897729726 -5.225134473476459 0.21803056414862135 1.008659686879753 0.8645267704302979 0.1401664639862713 0.07637249397645736 20.557005579604034 0.7945927799985286 0.053386093374132325 0.8114579831645905 5.954777332664168e-06 5.225134473476459 -0.14413291644945514 RRPEAS(ph)PVQKK ddPTM_A549_PD325901_60min_R1 3 RRPEASPVQKK 11 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RRPEAS(1)PVQKK;RRPEAS(1)PVQKK;RRPEAS(1)PVQKK 60.157 0.0014789000000000002 129998000.0 5717.73 5231.5599999999995 5842.63 5534.02 6322.83 6111.639999999999 6053.219999999999 5717.74 6047.65 6133.610000000001 6999.61 True False 6298.189740429644 5672.441921361414 6239.146006388338 5875.843846728684 5878.736233379344 6061.868830147787 6283.578599549083 5603.695190219746 5793.48830176938 5746.332817831566 6138.702344183611 1.0259806368355924 0.9240457678707982 1.0163623607357175 0.9571801200454061 0.9576512923695375 0.9874837531243679 1.0236004691614902 0.9128468650266482 0.9437643294854784 0.9360826597621543 1.0 12.583718002233054 -5.208718138142487 22.194980129434295 0.9715686695496357 1.0259819013283777 0.17541552136584115 0.03556703325446798 17192.4336683463 7236920.764463404 0.004683074120639238 5.526151286443115 6.184176297126277e-06 5.208718138142487 0.05441323177874202 RRPENPKPQDGK ddPTM_A549_MK2206_60min_R1 2 RRPENPKPQDGK 12 3 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 93.01100000000001 7.5343e-05 94222000.0 2343.1000000000004 2108.2 2036.98 1268.85 2075.96 1542.82 1542.52 1715.49 2120.4 2780.1 2681.3 False True 2738.5579967049944 2215.4983751497443 2325.8543938387047 1579.718306960841 1770.5890340075837 1706.0801883589684 1822.7759172977103 1958.6659609677868 1640.1327855830107 2152.0734791366945 2015.4592098846404 1.35877619515889 1.0992524007849078 1.1540071773379281 0.7838006838408106 0.8785040279276739 0.8464970067325848 0.9043973246186616 0.9718211866366155 0.8137762240680066 1.0677831972892537 1.0 10.976892869988196 -5.677675762313833 1.3802758899598777 0.9015469496850351 1.3573078957712625 0.6522623478188727 0.09660635760518957 0.2786710502362761 0.7607883369956777 0.013340041141477734 0.14233052891231632 2.100507505477028e-06 5.677675762313833 0.4557609460862274 RRPENPKPQDGK ddPTM_A549_PD325901_60min_R1 3 RRPENPKPQDGK 12 3 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ;; 114.72 7.9304e-06 80661500.0 2547.83 2482.4300000000003 2661.4 2758.1000000000004 2739.84 3223.94 2687.9 2304.46 2627.59 3102.04 3569.5 False True 2806.4838259866865 2691.6330881888425 2842.0186082983046 2928.4615729004217 2547.4030903348757 3197.685301533901 2790.189505375318 2258.495737486104 2517.161529990363 2906.176665002541 3130.474128924812 0.8965043985048352 0.8598164295046601 0.9078556446254422 0.9354690223573983 0.8137435370564149 1.0214699658393835 0.8912993337317987 0.7214548482027557 0.8040831600339414 0.9283503218091416 1.0 11.61216546311271 -10.982644290654116 1.3074220809261812 0.9987068760372846 0.866688266503994 0.15544195227500235 0.07628321383506152 0.45911882986175256 1.4182198090451843 0.052320006216964955 0.012538526136921137 1.0407722624272256e-11 10.982644290654116 -0.1320186095332906 RRPES(ph)APAESSPSK ddPTM_A549_MK2206_60min_R1 1 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPES(1)APAESSPSK 83.758 9.4898e-05 18542000.0 1992.2 2052.1 1801.7 1399.8 1477.9 1137.0 957.62 871.44 1429.4 1783.0 1518.5 True False 2328.434655386323 2156.543124772218 2057.2081519598605 1742.7510628394095 1260.5028677622913 1257.3165853204837 1131.607158365943 994.969288673072 1105.6431822827562 1380.2190616527193 1141.414541532028 2.0399553104177683 1.8893601284224621 1.802332173899447 1.5268344667313039 1.1043339837517936 1.1015424629450488 0.9914076938664884 0.87169845176285 0.9686605015551505 1.2092180460572752 1.0 10.156607132728205 -6.507902307607677 1.1800493629512951 0.9760664138993003 2.001133064558297 0.9512437385859512 0.08830337231933608 0.04216144915607556 0.11009028001467809 0.008150022784050076 0.030163667843431084 3.105258021980204e-07 6.507902307607677 1.025066650658997 up RRPES(ph)APAESSPSK ddPTM_A549_PD325901_60min_R1 2 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPES(1)APAESSPSK;RRPES(0.999)APAESSPSK 81.723 0.00014044 25866000.0 3084.2 2849.9 2911.7 3156.3999999999996 3295.0 3363.7 3349.5 3956.7000000000003 4621.9 6186.7 6630.0 True False 3397.3057135319623 3090.0710747249204 3109.305471474478 3351.363659295491 3063.570567132904 3336.307142431181 3476.967055416727 3877.7805145288958 4427.657616090203 5796.0707061711755 5814.552031032777 0.5842764318558407 0.5314375137126538 0.5347454893996718 0.5763752119525231 0.5268798956105918 0.5737857576344687 0.5979767722190543 0.6669095905983538 0.761478716238053 0.9968215393442237 1.0 12.505452331476224 -9.329622843474871 0.4782259923628434 1.0007453245020819 0.5319943775606845 0.9759240332373733 0.026156777080343693 0.09402920995106273 0.05057773747602802 0.016879595921807034 0.009997709149227867 4.681415152802661e-10 9.329622843474871 -0.4687509469413974 down RRPESAPAES(ph)SPSK ddPTM_A549_MK2206_60min_R1 1 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPESAPAES(0.5)S(0.5)PS(0.001)K 65.225 0.00098197 5124200.0 794.07 714.83 778.92 618.59 926.0 786.46 625.84 625.96 880.55 1129.5 988.26 True False 928.0896028524328 751.2117937142079 889.38256853226 770.1445777695608 789.7866266647821 869.6826751901029 739.5470269958248 714.6917469221017 681.1068309494057 874.3451655281812 742.8477674115522 1.2493671564583877 1.0112594082793034 1.1972608757125398 1.0367461700169391 1.0631877233969325 1.1707414538250631 0.995556639515484 0.9620971863622072 0.9168861519537409 1.1770179623408314 1.0 9.536922777789078 -7.899985985992216 5.403152081899027 0.9605820493103207 1.1129663532745002 0.18268514101407385 0.09446148062375412 0.119744401317468 5.439573581104714 0.010261090379341356 0.014263696456782238 1.2589660360155381e-08 7.899985985992216 0.15238430396417957 RRPESAPAES(ph)SPSK ddPTM_A549_PD325901_60min_R1 3 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPESAPAES(0.61)S(0.389)PS(0.001)K;RRPES(0.001)APAES(0.497)S(0.497)PS(0.006)K;RRPES(0.001)APAES(0.497)S(0.497)PS(0.005)K 81.346 9.3146e-05 59646000.0 2773.89 3292.42 2349.81 2847.25 3019.34 2894.1499999999996 2657.32 3014.23 3403.6900000000005 3553.07 3840.91 True False 3055.493270770109 3569.883788148995 2509.28223715542 3023.11816592608 2807.271974557529 2870.5810019523733 2758.4457667412985 2954.108818032311 3260.6447459508117 3328.72855382928 3368.502419534558 0.907077653574107 1.0597836496855664 0.7449251698926015 0.897466526487993 0.8333887362756958 0.852183149789459 0.8188938059668801 0.8769798712035641 0.9679805266107989 0.9881924188403065 1.0 11.71789162024949 -8.809993745658954 3.6466270765212783 0.9863676503609377 0.8721160565973354 0.32044126924271643 0.07274836087561733 0.19222795761421774 5.092286894284352 0.012745682009924687 0.013659676778327409 1.5488389238173504e-09 8.809993745658954 -0.11425159376360228 RRPESAPAESS(ph)PSK ddPTM_A549_MK2206_60min_R1 5 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPESAPAES(0.129)S(0.87)PS(0.001)K;RRPESAPAES(0.25)S(0.745)PS(0.005)K;RRPESAPAES(0.183)S(0.809)PS(0.007)K;RRPESAPAES(0.235)S(0.763)PS(0.002)K;RRPESAPAES(0.196)S(0.8)PS(0.004)K 93.495 1.3205e-05 146795500.0 5929.55 5324.55 4945.9800000000005 4451.35 5735.62 4570.94 4960.389999999999 5244.620000000001 7468.37 7358.02 7709.8 True False 6930.313076421024 5595.546852008149 5647.3943361438805 5541.930949828697 4891.917895929869 5054.633836855591 5861.628654671834 5988.06094597513 5776.796119536216 5695.838171633175 5795.2438803448385 1.1958621965722422 0.9655412209632829 0.9744877787279316 0.9562895133067172 0.8441263209856117 0.8722038176855503 1.0114550441185308 1.0332716050629467 0.9968167412468714 0.9828470189065195 1.0 12.500653659881866 -5.259382134401895 24.63652031553883 0.9782290815892926 1.1958622869485227 0.5735973292970813 0.056291187651940404 95.30651299228111 1141236.603781591 0.008474541526878399 0.0767496340929405 5.503232555385317e-06 5.259382134401895 0.21763320535923014 RRPESAPAESS(ph)PSK ddPTM_A549_PD325901_60min_R1 3 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPESAPAES(0.089)S(0.905)PS(0.006)K;RRPESAPAES(0.026)S(0.968)PS(0.006)K;RRPESAPAES(0.04)S(0.958)PS(0.001)K 128.1 3.9168e-09 136274000.0 9129.6 8554.2 7634.6 7661.8 9470.9 7211.6 8866.5 8913.3 9210.3 9517.5 10202.099999999999 True False 10056.430271143707 9275.092454967506 8152.729866579333 8135.051984789693 8805.696656831262 7152.871120598356 9203.919509434967 8735.517239151417 8823.223120681014 8916.563425733284 8947.306376440354 1.1239617654788092 1.0366351687017517 0.9111937742566563 0.9092179972969906 0.9841729215865489 0.79944408067136 1.0286804902166216 0.9763292852196712 0.9861317752473447 0.996563999329673 1.0 13.127237703100137 -5.460675689162313 3.7993394668687577 0.971191058848331 1.1169341644579382 0.38652611947471127 0.06217735553622052 0.19834739613137278 5.311259053468588 0.008529138599114056 0.05722338624405731 3.461978056771522e-06 5.460675689162313 0.14574310560960724 RRPGAQPLPPPPPS(ph)QSPEPTEPHPR ddPTM_A549_MK2206_60min_R1 1 RRPGAQPLPPPPPSQSPEPTEPHPR 25 2 K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;Q9UIS9-6;Q9UIS9-5;Q9UIS9-10;Q9UIS9;Q9UIS9-9;Q9UIS9-12 K7EPZ6 MBD1 Methyl-CpG-binding domain protein 1 1 RRPGAQPLPPPPPS(0.533)QS(0.445)PEPT(0.023)EPHPR 49.088 0.002433 11790000.0 662.98 966.93 678.29 1113.4 935.25 621.54 485.2 507.2 1379.2 1279.5 1405.2 True False 774.8748156952233 1016.1426069080467 774.4817213702908 1386.1830499824262 797.6759639181837 687.3109502551393 573.3545594694716 579.097153234855 1066.8134021298283 990.4600613486572 1056.2500584529505 0.7336092523679034 0.9620284503428594 0.7332370920808704 1.312362578244697 0.7551961370648438 0.6507085559472704 0.5428208546650803 0.548257629526702 1.010000798193895 0.9377136156558861 1.0 10.044735705895754 -8.885805391462297 20.636203714426806 1.004772285338752 0.7883815596067131 0.16201737294937313 0.2030053179654603 3.2169084115090083 566.7721118493229 0.036360880455948486 0.03870862128738477 1.300752318108873e-09 8.885805391462297 -0.21639072573203888 RRPGAQPLPPPPPSQS(ph)PEPTEPHPR ddPTM_A549_MK2206_60min_R1 2 RRPGAQPLPPPPPSQSPEPTEPHPR 25 2 K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;Q9UIS9-6;Q9UIS9-5;Q9UIS9-10;Q9UIS9;Q9UIS9-9;Q9UIS9-12 K7EPZ6 MBD1 Methyl-CpG-binding domain protein 1 1 RRPGAQPLPPPPPS(0.001)QS(0.999)PEPTEPHPR;RRPGAQPLPPPPPS(0.003)QS(0.997)PEPTEPHPR 177.82 5.6849e-49 30987000.0 3863.4 4178.9 4205.8 3402.8 4974.200000000001 3487.1 3281.5 3601.4 5687.3 6076.6 7280.9 True False 4515.447468938618 4391.588160474943 4802.245682140635 4236.486152757495 4242.501769282897 3856.1026074503598 3877.7060735759896 4111.9094788249395 4399.135630751867 4703.891839618016 5472.851587382642 0.8250630218712186 0.8024314364013648 0.8774668206263712 0.7740911817386901 0.7751903558034995 0.7045874615603303 0.7085348490932638 0.7513285191772275 0.8038105109398238 0.8594955964935318 1.0 12.418077018779165 -10.301861190513957 0.7722877328547696 0.9962782717655018 0.778044433461118 0.41737990860391927 0.061195030685186724 0.26886702183270716 0.3013903117387771 0.03219394337501979 0.010794703040277288 4.9904396673090624e-11 10.301861190513957 -0.2182338383043838 RRPGAQPLPPPPPSQS(ph)PEPTEPHPR ddPTM_A549_PD325901_60min_R1 3 RRPGAQPLPPPPPSQSPEPTEPHPR 25 2 K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;Q9UIS9-6;Q9UIS9-5;Q9UIS9-10;Q9UIS9;Q9UIS9-9;Q9UIS9-12 K7EPZ6 MBD1 Methyl-CpG-binding domain protein 1 1 RRPGAQPLPPPPPS(0.018)QS(0.981)PEPTEPHPR;RRPGAQPLPPPPPS(0.036)QS(0.964)PEPTEPHPR;RRPGAQPLPPPPPS(0.018)QS(0.948)PEPT(0.035)EPHPR 113.43 4.0873e-14 41894500.0 7691.570000000001 7524.3099999999995 7401.58 7738.3 8528.59 8997.91 6748.700000000001 8666.039999999999 9399.900000000001 8291.4 8438.5 True False 8472.412524165435 8158.410010268244 7903.895728116241 8216.277216045582 7929.571260438237 8924.634004207548 7005.5254715303445 8493.18903382314 9004.854892032783 7767.879588980823 7400.6179960588415 1.1448250036250178 1.1023957748681206 1.0680048250464242 1.110215014532721 1.0714742018384258 1.2059309113050172 0.946613576766305 1.1476324056107399 1.2167706665616667 1.049625800590919 1.0 12.853430034136405 -11.149668449473428 1.5473118540011588 1.0003360930246927 1.1241251445138953 0.1600174654439841 0.071541966491387 0.4254369105522332 1.8342569514115588 0.05301721741469317 0.01145025233496484 7.084864530443834e-12 11.149668449473428 0.1237890514892026 RRPGAS(ph)PTGETPTIEEGEEDEDEAS(ph)EAEGAR ddPTM_A549_MK2206_60min_R1 2 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 2 RRPGAS(0.736)PT(0.211)GET(0.053)PTIEEGEEDEDEAS(1)EAEGAR;RRPGAS(0.707)PT(0.26)GET(0.031)PT(0.001)IEEGEEDEDEAS(1)EAEGAR 148.82 7.0181e-37 12811300.0 1961.44 2418.26 2308.38 1931.01 3187.8 2508.11 2291.48 1897.32 3141.8999999999996 3150.0 3676.0 True False 2292.4831193961177 2541.33910477641 2635.7429948499193 2404.107536686334 2718.8788428531257 2773.5165354513247 2707.8122546024438 2166.2709202988085 2430.264666583315 2438.4128122299876 2763.147747561237 0.8296636042786604 0.9197261011538033 0.9538914439795102 0.8700611607932319 0.9839788137470452 1.0037525274930519 0.9799737480532366 0.7839866406748486 0.8795275854243677 0.8824764489637366 1.0 11.43209699084978 -10.905941982420126 1.2283863479853598 0.9987855384981335 0.9121806227772892 0.0 0.07308600613146582 0.6224352847092564 1.7051290489877382 0.043783736282021736 0.011052651912438944 1.2418181915189131e-11 10.905941982420126 -0.08660491572084428 RRPGAS(ph)PTGETPTIEEGEEDEDEAS(ph)EAEGAR ddPTM_A549_PD325901_60min_R1 2 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 2 RRPGAS(0.584)PT(0.164)GET(0.201)PT(0.051)IEEGEEDEDEAS(1)EAEGAR;RRPGAS(0.75)PT(0.223)GET(0.026)PTIEEGEEDEDEAS(1)EAEGAR 129.9 3.4406999999999998e-28 21735400.0 1034.6599999999999 780.3900000000001 928.37 988.6600000000001 1003.54 618.0 1095.32 1042.12 1121.95 1140.6 1304.6100000000001 True False 1139.6979215235658 846.156204078943 991.3747709423227 1049.7272827902289 933.0548124250537 612.967212897247 1137.003001982102 1021.3340990726756 1074.7983431862228 1068.5823213439867 1144.1512406041743 0.9961077531338803 0.7395492606660343 0.8664717877846487 0.9174724857492752 0.8154995417671792 0.5357396742178655 0.9937523656240607 0.8926565499621846 0.9393848514455752 0.9339519841622659 1.0 10.16006205325383 RRPGAS(ph)PTGETPTIEEGEEDEDEASEAEGAR ddPTM_A549_MK2206_60min_R1 4 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 1 RRPGAS(0.816)PT(0.16)GET(0.023)PT(0.001)IEEGEEDEDEASEAEGAR;RRPGAS(0.984)PT(0.008)GET(0.008)PTIEEGEEDEDEASEAEGAR;RRPGAS(0.969)PT(0.026)GET(0.004)PTIEEGEEDEDEASEAEGAR;RRPGAS(0.948)PT(0.019)GET(0.028)PT(0.005)IEEGEEDEDEASEAEGAR 283.31 5.843799999999998e-169 328164000.0 2771.5 2806.29 3152.94 2791.85 3876.8100000000004 1762.69 1666.42 2706.6000000000004 4550.49 3540.49 4730.31 True False 3239.2614433305866 2949.1181743662737 3600.0743024034637 3475.853375330907 3306.536384579151 1949.2166858210758 1969.186943510134 3090.268838614866 3519.8112806393297 2740.6908500229056 3555.6434770855267 0.9110197533037618 0.8294189767258648 1.0124958606238992 0.9775595887864377 0.9299403626624111 0.5482036369458505 0.5538201330365743 0.8691166194052401 0.9899224439466108 0.7708002412742974 1.0 11.79589495764112 -8.700828636151444 4.633807344549272 0.9955397936502521 0.8229837537014373 0.008683210383611528 0.1590125202320211 0.2523538195891431 10.870602653420775 0.027047461487936856 0.03035596532702111 1.9914589735486613e-09 8.700828636151444 -0.17255603994881485 RRPGAS(ph)PTGETPTIEEGEEDEDEASEAEGAR ddPTM_A549_PD325901_60min_R1 4 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 1 RRPGAS(0.465)PT(0.068)GET(0.465)PT(0.001)IEEGEEDEDEASEAEGAR;RRPGAS(0.997)PT(0.003)GETPTIEEGEEDEDEASEAEGAR;RRPGAS(0.848)PT(0.148)GET(0.005)PTIEEGEEDEDEASEAEGAR;RRPGAS(0.985)PT(0.015)GETPTIEEGEEDEDEASEAEGAR 253.47 5.991899999999999e-139 423049000.0 3648.31 3710.9500000000003 4772.48 4658.82 4358.09 2121.13 1429.02 5386.04 4733.15 5069.1 5726.9 True False 4018.683745456128 4023.6847800801584 5096.369192053617 4946.5847304520985 4051.9927929943024 2103.8562205384105 1483.4021380897489 5278.6112069333585 4534.232165472498 4749.036160901981 5022.527605810203 0.8001317386104957 0.8011274592946876 1.0147020767308461 0.9848795504338789 0.8067636678207287 0.41888395359034164 0.2953497231899148 1.0509869972296242 0.9027789434600956 0.9455470499371992 1.0 12.294197873268445 RRPGASPTGETPTIEEGEEDEDEAS(ph)EAEGAR ddPTM_A549_MK2206_60min_R1 5 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 1 RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR;RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR;RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR;RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR;RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR 179.45 6.5382e-59 252747900.0 2124.97 2123.66 2024.96 2103.12 3034.45 1305.77 1102.8 2357.45 3555.66 2686.79 3908.59 True False 2483.6129854714754 2231.745223114748 2312.1297770953183 2618.3844944126445 2588.0864247116087 1443.9457147000232 1303.1644851255835 2691.625756887836 2750.308687222265 2079.8422729433046 2937.979231403799 0.8453473594790449 0.7596191284335239 0.7869796193183289 0.8912195383905254 0.8809069843134978 0.4914758073392132 0.4435580997973621 0.9161486671237452 0.9361225763015816 0.7079159208179742 1.0 11.520608482170763 -8.500294081622869 24.650469856252936 0.9675356812218159 0.7309723988440683 0.1409419725530069 0.15800095883505372 524.5640131564727 572546.5047667196 0.024144474318898816 0.029071798984195516 3.1601370551338283e-09 8.500294081622869 -0.2365632823777476 RRPGASPTGETPTIEEGEEDEDEAS(ph)EAEGAR ddPTM_A549_PD325901_60min_R1 4 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 1 RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR;RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR;RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR;RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR 233.28 3.6671999999999995e-106 337739000.0 2402.9100000000003 2969.34 2700.0 3071.56 3592.9400000000005 1316.79 1286.84 2585.1899999999996 3065.4799999999996 2536.94 3038.79 True False 2646.8516542711513 3219.576702699636 2883.2382364189607 3261.283285181111 3340.5842893701024 1306.0664988203325 1335.8114003858677 2533.6263574076766 2936.648536093857 2376.7571754431115 2665.038094476937 0.993175917356125 1.2080790549943479 1.081875055517677 1.2237285808183533 1.2534846298419435 0.49007423253237664 0.5012353868990549 0.9506904845594515 1.1019161572886365 0.8918285935081892 1.0 11.379940439905512 RRPGASPTGETPTIEEGEEDEDEASEAEGAR ddPTM_A549_MK2206_60min_R1 1 RRPGASPTGETPTIEEGEEDEDEASEAEGAR 31 2 P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035 P04920-2 SLC4A2 Anion exchange protein 2 0 101.3 1.2829e-14 1850200.0 359.2 342.0 416.66 340.12 453.84 322.72 390.3 114.9 342.1 524.3 485.33 False True 419.82417840315577 359.4063391998922 475.74865326946497 423.44941526856684 387.0807371982125 356.8700161958016 461.21245787496844 131.1874268664923 264.6148962214432 405.86026585783554 364.8091665734206 1.1508049053330545 0.9851899900863894 1.3041027936279033 1.1607422566870846 1.0610499205214174 0.9782375249717823 1.2642567680166719 0.3596056209297302 0.7253515549154587 1.1125275981138294 1.0 8.510998170384472 RRPGHGS(ph)LTNISR ddPTM_A549_MK2206_60min_R1 2 RRPGHGSLTNISR 13 2 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 RRPGHGS(0.998)LT(0.002)NISR;RRPGHGS(1)LTNISR 95.57 3.4734e-05 19034700.0 2544.0 2448.6 1923.43 1608.8200000000002 2351.3 1698.1399999999999 1462.99 1749.65 2245.0 3723.9 3923.6 True False 2973.3650051715704 2573.223281183792 2196.201296400151 2002.9809722226744 2005.426884748275 1877.8360476658968 1728.7963457507053 1997.6682455784 1736.511084528325 2882.668403639127 2949.2618341488746 1.0081726114458913 0.8724973996506474 0.7446613491453367 0.67914654068031 0.6799758710901366 0.6367139146219006 0.5861793367185445 0.6773451656437638 0.5887951569513541 0.9774203057393289 1.0 11.526138194569205 -2.000129321936235 13.444227741046628 0.7666016025018262 0.7426631090427848 0.0 0.15757492842705728 0.0 0.0 0.024132146349039034 0.0 0.00999702269567933 2.000129321936235 -0.02393849345904142 RRPKT(ph)PLGK ddPTM_A549_MK2206_60min_R1 1 RRPKTPLGK 9 3 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RRPKT(1)PLGK 41.283 0.039979 5089100.0 1281.5 1589.6 1154.0 792.48 1752.7 1373.6 1399.2 924.34 1517.1 1552.3 1618.1 True False 1497.7858703330855 1670.5038502694415 1317.654552567951 986.6376355757786 1494.8801517876498 1518.9534402781132 1653.4165284618393 1055.368025672528 1173.479272310878 1201.6343518808285 1216.2811127118707 1.2314471175118062 1.373452101500464 1.083347047649251 0.8111921045751754 1.2290580986286987 1.2488506352708149 1.3594032754280903 0.8677007433910041 0.964809253425337 0.9879577503276482 1.0 10.248260994565511 -8.273575662039732 24.946487191284895 0.9742417215359631 1.1829288938978275 0.3711363643817597 0.14668032335341674 697.1577312473212 1433025.8081798118 0.025063776381158635 0.030414278319651565 5.32628422629098e-09 8.273575662039732 0.2086871723618644 RRPKT(ph)PLGK ddPTM_A549_PD325901_60min_R1 2 RRPKTPLGK 9 3 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RRPKT(1)PLGK;RRPKT(1)PLGK 44.188 0.014334999999999999 8260200.0 2479.8 2570.7 2626.6000000000004 2007.04 2699.1 2788.1000000000004 2192.29 2287.82 3000.0 3007.7 3138.5 True False 2731.547470467727 2787.341910872434 2804.8568710289055 2131.0103024814416 2509.5245273895052 2765.3946379916083 2275.7187956171188 2242.18763533993 2873.920432781022 2817.7933087027063 2752.4843965907057 0.9923934442102882 1.0126640188496268 1.0190273465321256 0.7742133997638507 0.9117307006346207 1.0046903958536126 0.8267871739566914 0.8146050303199386 1.0441187010326853 1.0237272597050482 1.0 11.426518670059355 -8.802143446896467 24.999940923207586 1.0208338633476246 0.9205814105577337 0.24116559363564927 0.08141757716747433 162.29347643451558 99677.98643720496 0.01463933575222346 0.015584848353466442 1.5770902728178573e-09 8.802143446896467 -0.10025245278989092 RRPPGPPLQVTSDLS(ph)L ddPTM_A549_MK2206_60min_R1 2 RRPPGPPLQVTSDLSL 16 2 O95466-2;K7EK60 O95466-2 FMNL1 Formin-like protein 1 1 RRPPGPPLQVTSDLS(1)L;RRPPGPPLQVTSDLS(1)L 99.569 6.3695e-07 10371800.0 540.19 599.6600000000001 653.34 508.88 774.13 663.56 781.94 840.88 765.8599999999999 1038.8 897.75 True False 631.3608656224964 630.1801326450509 745.9934361999527 633.5556228444914 660.2565024838099 733.7774787645208 924.0083764046966 960.077315086997 592.3939328271099 804.1343585220667 674.8138983604734 0.9356073832451428 0.9338576667969277 1.105480248721043 0.9388597721294373 0.978427539930591 1.0873775429748929 1.369278816944443 1.4227290182072405 0.8778626733479987 1.1916387028716955 1.0 9.398345877225404 RRPPGPPLQVTSDLS(ph)L ddPTM_A549_PD325901_60min_R1 2 RRPPGPPLQVTSDLSL 16 2 O95466-2;K7EK60 O95466-2 FMNL1 Formin-like protein 1 1 RRPPGPPLQVTSDLS(1)L;RRPPGPPLQVTSDLS(1)L 92.633 2.7764999999999996e-06 19460300.0 692.3199999999999 823.91 732.8199999999999 1220.8200000000002 1092.97 860.4 949.21 1143.72 793.58 925.52 1203.71 True False 762.603816740953 893.3437872123966 782.5535720046453 1296.227278716614 1016.2035577418059 853.3931876647106 985.3327059776426 1120.9076073690167 760.2285923487879 867.0825092497687 1055.661300946375 0.7223944043958958 0.846240916865604 0.7412922793542823 1.227881781357882 0.9626227245716064 0.808396771672566 0.9333795840524944 1.0618060985698254 0.720144417217209 0.8213643035625632 1.0 10.04393131838844 RRPPS(ph)PEPSTK ddPTM_A549_MK2206_60min_R1 5 RRPPSPEPSTK 11 2 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RRPPS(1)PEPSTK;RRPPS(0.999)PEPS(0.001)TK;RRPPS(1)PEPSTK;RRPPS(1)PEPSTK;RRPPS(0.999)PEPSTK 93.494 5.9635e-05 430809000.0 6323.67 7602.120000000001 6994.8099999999995 6553.29 8940.83 6712.01 6038.52 5475.41 8864.769999999999 9580.0 10792.8 True False 7390.950897112154 7989.035436720133 7986.779238169701 8158.846344188365 7625.645750845885 7422.2704431283555 7135.640920131067 6251.566135239867 6856.913749128798 7415.871346401046 8112.649893873479 0.9110402881669603 0.9847627521499851 0.9844846434456843 1.0056943724823837 0.9399697818347406 0.9149008696570913 0.8795696860429992 0.7705948385571196 0.845212580208473 0.9141120895653801 1.0 12.985957514063555 -7.066548940136879 3.4288923854671465 0.907572504803431 0.9734831448318493 0.2825616648535655 0.05829374937899829 0.3999052519339652 9.22640821020018 0.011554246345646061 0.021310022282137357 8.579284303243635e-08 7.066548940136879 0.06591064002841829 RRPPS(ph)PEPSTK ddPTM_A549_PD325901_60min_R1 10 RRPPSPEPSTK 11 2 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RRPPS(0.972)PEPS(0.027)T(0.001)K;RRPPS(1)PEPSTK;RRPPS(0.998)PEPS(0.002)TK;RRPPS(0.842)PEPS(0.157)T(0.001)K;RRPPS(1)PEPSTK;RRPPS(1)PEPSTK;RRPPS(1)PEPSTK;RRPPS(0.999)PEPS(0.001)TK;RRPPS(1)PEPSTK;RRPPS(1)PEPSTK 118.08 5.3428e-06 809113900.0 27813.439999999995 29084.79 28465.519999999997 27610.88 31859.93 29531.720000000005 31034.540000000005 32554.440000000006 30243.66 30950.95 33922.84 True False 30637.039953627653 31535.867326379364 30397.361364277273 29316.3413487418 29622.19842759167 29291.223463530558 32215.57640245193 31905.116155735894 28972.624145360718 28996.70173487784 29750.545734600306 1.029797578401943 1.0600097089883869 1.02174130301498 0.9854051623209883 0.9956858839446644 0.9845608791459731 1.0828566537851694 1.0724212066681449 0.9738518548137134 0.9746611707076777 1.0 14.86062851255424 -8.797488337406925 24.999967826694867 0.9876522596568816 1.0275898838340722 0.287898405752707 0.03207235528900672 193.6037759698662 134263.5964685818 0.006010727604961819 0.006398977876672547 1.5940856878945712e-09 8.797488337406925 0.0399376241771906 RRPQT(ph)PKEEAQALEDLTGFK ddPTM_A549_PD325901_60min_R1 1 RRPQTPKEEAQALEDLTGFK 20 3 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RRPQT(1)PKEEAQALEDLTGFK 51.645 0.0030026 1585000.0 267.42 269.73 271.12 262.35 212.19 292.01 382.79 364.96 343.81 359.83 351.08 True False 294.56828153580113 292.4610937175173 289.519833577003 278.55476365992024 197.28650641576047 289.63196737560685 397.3572829207256 357.6805864944187 329.3608613314812 337.1102723910278 307.8993856794856 0.956703050529754 0.9498592959908043 0.9403066295117095 0.904694119623505 0.6407499189398516 0.9406708192562144 1.2905426298393563 1.1616800913878857 1.069702885585931 1.094871532942745 1.0 8.266315178696773 -7.534729964366892 24.996433993965958 1.065308998278673 0.8776609722417341 0.4981084610446156 0.11177024162096007 187.21408294954568 394868.26174036233 0.01833029659420068 0.027199524610712084 2.9192415759088316e-08 7.534729964366892 -0.18764802603693886 RRPRPPNAPS(ph)QDGK ddPTM_A549_MK2206_60min_R1 2 RRPRPPNAPSQDGK 14 3 P16989-2;P16989 P16989-2 YBX3 Y-box-binding protein 3 1 RRPRPPNAPS(1)QDGK;RRPRPPNAPS(1)QDGK 57.498999999999995 0.0035231000000000004 17776200.0 1598.42 1227.13 979.05 1049.45 1743.8899999999999 1415.65 1350.58 1137.95 1575.28 1746.17 2132.7 True False 1868.1942183829963 1289.585675503988 1117.8940118645173 1306.5652971116003 1487.366091117114 1565.4531433675832 1595.9629038093128 1299.2578973257175 1218.4815952052475 1351.7089842322657 1603.091730474388 1.1653695062291656 0.8044366089533586 0.6973362725373858 0.8150284055953309 0.927810968544496 0.9765212517840968 0.9955530762653454 0.8104700889082874 0.7600822660626373 0.8431887948372531 1.0 10.64664126493567 -5.252592478974679 24.24577767069261 0.8747761072137995 1.1653697363912838 0.44546561736628254 0.09616411599587296 670.9470112781553 1838732.867194012 0.015942737264924553 0.25679773289274943 5.589944822151115e-06 5.252592478974679 0.2905936291774843 RRPRPPNAPS(ph)QDGK ddPTM_A549_PD325901_60min_R1 1 RRPRPPNAPSQDGK 14 3 P16989-2;P16989 P16989-2 YBX3 Y-box-binding protein 3 1 RRPRPPNAPS(1)QDGK 74.786 0.00026528 14169000.0 917.3 872.36 850.47 666.44 882.05 705.96 815.1 756.85 959.87 939.1 1048.9 True False 1010.4236207194307 945.8768387476867 908.1880084915684 707.6044852049442 820.097850907307 700.2108958202921 846.1190765398344 741.7540330126612 919.5300019378402 879.8050657321918 919.8919495249296 1.0984155489579568 1.0282477623988087 0.9872768306762489 0.7692256526110274 0.8915154125773571 0.7611881984421215 0.9198026757129524 0.8063490863201204 0.9996065324984349 0.9564221821775478 1.0 9.84532060198867 -8.903298531605678 24.999999976083842 0.9998342737177461 0.904663238184249 0.10108987297263683 0.1002355954293689 19.932052402996895 5136.457920604977 0.0178578238166828 0.019011063512649713 1.2493999044434778e-09 8.903298531605678 -0.09517103553349715 RRPS(ph)ALEADSPMAPK ddPTM_A549_MK2206_60min_R1 1 RRPSALEADSPMAPK 15 2 A0A494BYR6;Q86Y91-6;Q86Y91 A0A494BYR6 KIF18B Kinesin-like protein KIF18B 1 RRPS(1)ALEADSPMAPK 68.12899999999999 0.0010873 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RRPS(ph)DENTIAPSEVQK ddPTM_A549_PD325901_60min_R1 2 RRPSDENTIAPSEVQK 16 2 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 RRPS(0.969)DENT(0.031)IAPSEVQK;RRPS(0.952)DENT(0.048)IAPSEVQK 151.63 1.2703e-15 35348000.0 4881.8 4766.2 5705.700000000001 5146.8 6218.0 5635.9 5526.3 5695.7 5348.5 6950.799999999999 6951.5 True False 5377.3967422087835 5167.864400980354 6092.923113161354 5464.706146769114 5781.269130935471 5590.003098976692 5736.606370607396 5582.094795309788 5123.721144909766 6511.925301769052 6096.509569189197 0.882045157344672 0.8476759270743919 0.9994117197738903 0.8963663691084619 0.9482916520221831 0.9169186131073576 0.9409656961090169 0.9156214276314467 0.8404351845528545 1.068139929555643 1.0 12.573767778408342 -9.124718844000123 0.007663870800158971 1.8467833624118897 3.9422226603162615e-07 0.17675680313633724 0.05981263145801258 3865.641373910528 18.574084956054367 2257.3410913967505 2217.072874690075 7.503798372329893e-10 9.124718844000123 -1.8467829681896237 RRPS(ph)GSEQSDNESVQSGR ddPTM_A549_PD325901_60min_R1 1 RRPSGSEQSDNESVQSGR 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RRPS(0.763)GS(0.19)EQS(0.042)DNES(0.003)VQS(0.001)GR 44.632 0.015459 6252100.0 179.7 169.84 107.3 365.03 242.58 201.85 157.25 241.17 163.59 267.43 140.04 True False 197.94301171185185 184.1530128535318 114.58202324731644 387.57707405672073 225.542017655569 200.20620052315425 163.23423480050175 236.35967515579506 156.71488119954913 250.54442416011057 122.81596778670144 1.611704204909463 1.4994223973657599 0.9329570520204249 3.1557547527520096 1.8364225899947741 1.630131685082342 1.3290961895443112 1.9245028103046726 1.2760138931748766 2.039998777644609 1.0 6.940354333130054 -9.007948362625557 0.853760061948309 1.055352420524218 1.7701367334759368 0.0 0.6019793643228635 0.5458952685167205 0.8328636685919641 0.13660149696072732 0.12375667363455374 9.81864679248906e-10 9.007948362625557 0.7147843129517188 RRPS(ph)LLSEFQPGNER ddPTM_A549_MK2206_60min_R1 2 RRPSLLSEFQPGNER 15 2 C9J0Q5;C9JE98;C9JQE8;C9J330;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 RRPS(0.998)LLS(0.002)EFQPGNER;RRPS(0.987)LLS(0.013)EFQPGNER 51.523999999999994 0.006998000000000001 5960600.0 1857.01 2211.94 1783.92 1900.24 2174.2 1559.02 2298.11 1581.06 3066.6 2265.5 2771.9 True False 2170.4278884644878 2324.5182980403797 2036.9066806040028 2365.7988853050156 1854.378060145325 1723.9944616062796 2715.646839782331 1805.18009679318 2372.019996353923 1753.721976541917 2083.5607294518477 1.041691685672869 1.1156470100355194 0.9776085005882603 1.1354595293833458 0.8900043247758768 0.8274270277976662 1.3033682202758616 0.8663918796684629 1.1384453367855347 0.8416946776508376 1.0 11.024835435483524 RRPS(ph)PQPS(ph)PR ddPTM_A549_MK2206_60min_R1 7 RRPSPQPSPR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR 79.61399999999999 0.0010321 370014400.0 8640.79 8411.24 7140.71 6960.59 10818.89 7550.45 7388.120000000001 7889.98 11761.48 11392.550000000001 14070.07 True False 10099.144104967161 8839.336188689194 8153.370052051554 8665.93486247276 9227.445612696922 8349.43360741692 8730.445770625713 9008.408827050365 9097.523559224139 8818.965042530395 10576.083304822883 0.9549039860873421 0.8357854163892884 0.7709252865220408 0.8193898074271918 0.8724823119054897 0.7894636763696282 0.8254895048571027 0.8517717350942545 0.8601977969552779 0.8338592641860895 1.0 13.368517825254054 -10.32674403697176 0.5947959202888617 1.009374372389273 0.8341476661785328 0.0 0.066233052312047 0.44609538055826303 0.2733662029530235 0.039368616310546424 0.010228490560254976 4.712549912538638e-11 10.32674403697176 -0.1752267062107402 RRPS(ph)PQPS(ph)PR ddPTM_A549_PD325901_60min_R1 6 RRPSPQPSPR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR 81.904 0.00089762 596869000.0 12149.009999999998 10339.89 11927.09 11924.97 12038.03 11002.01 10946.21 10609.88 10535.33 12582.95 15040.16 True False 13382.368551571537 11211.268818147115 12736.534050818605 12661.548313328134 11192.520301748982 10912.41327826479 11362.774011545951 10398.257620110155 10092.566717696962 11788.460389580325 13190.315667429564 1.0145601431371505 0.849962131371181 0.9655973649113291 0.9599124564238368 0.8485407464042976 0.8273049374557785 0.861448224442702 0.7883251532627266 0.7651497486613018 0.8937208696748026 1.0 13.687191470779222 -5.252934047388162 23.290699116002155 0.8801108969531161 1.0145603237629208 0.23939691399473606 0.07065790389183495 636.5955186137328 1743123.3697841265 0.01288878299695449 0.19469908860412333 5.58555011298813e-06 5.252934047388162 0.13444942680980476 RRPS(ph)PQPSPR ddPTM_A549_MK2206_60min_R1 8 RRPSPQPSPR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(0.996)PQPS(0.004)PR 101.38 0.00011456 2539329000.0 10413.429999999997 11745.949999999997 10262.39 8985.57 13900.06 10606.410000000002 10098.73 10098.98 15880.96 15657.57 16845.45 True False 12170.962400080098 12343.768683991158 11717.751216401919 11187.035053377565 11855.379587298139 11728.77326623485 11933.53852092155 11530.54134182914 12283.947916681933 12120.514062345355 12662.259854231614 0.9611998600717921 0.9748472094312598 0.9254075774227577 0.8834943511002863 0.9362767565803964 0.9262780420917676 0.942449346191033 0.9106227067339592 0.9701228736493469 0.9572157104558858 1.0 13.628247287439082 -9.095842141173861 1.8253739334418364 0.9899738263558855 0.9324032767192851 0.3193398051749171 0.02577428414364931 0.18917566000882705 1.2922043146491653 0.005164605975179646 0.004940729703392172 8.019695130050598e-10 9.095842141173861 -0.057570549636600354 RRPS(ph)PQPSPR ddPTM_A549_PD325901_60min_R1 8 RRPSPQPSPR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(0.999)PQPS(0.001)PR;RRPS(0.993)PQPS(0.007)PR;RRPS(1)PQPSPR;RRPS(0.998)PQPS(0.002)PR 120.53 1.0375999999999999e-05 3628790000.0 17138.73 16806.33 17232.940000000002 17364.350000000002 21343.679999999997 19779.3 18112.53 18971.460000000003 18750.97 20393.14 21919.360000000004 True False 18878.64125273381 18222.658410920263 18402.470938486582 18436.906462199866 19844.573548498694 19618.223938606003 18801.812240706717 18593.059347477552 17962.931939154652 19105.513660084962 19223.417678271293 0.9820647695790748 0.9479406167987385 0.9572944440200846 0.9590857760448892 1.0323124576817322 1.020537776733685 0.9780681331165619 0.9672088313668463 0.934429675294347 0.9938666463914166 1.0 14.23057723122628 -7.573735955004022 0.001028428735587012 1.8414989174285976 0.10340725358263729 0.0 0.02922589727449093 1442608.3634816275 597.3739447398075 503535.6717187242 506050.53638547804 2.6684805704426296e-08 7.573735955004022 -1.7380916638459603 RRPS(ph)SNLNNNVR ddPTM_A549_MK2206_60min_R1 2 RRPSSNLNNNVR 12 2 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 RRPS(0.96)S(0.04)NLNNNVR;RRPS(0.961)S(0.039)NLNNNVR 55.18600000000001 0.0062413 18681200.0 2709.2 3516.1 2982.3 3000.6000000000004 3076.1000000000004 1708.74 1590.1799999999998 2029.3500000000001 3199.4 4657.1 4444.1 True False 3166.4467264193486 3695.054471522635 3405.234984509011 3735.747134702051 2623.6097648850287 1889.5577326301875 1879.095122376678 2317.016577123727 2474.7410083919467 3605.057875503578 3340.5073190796775 0.9478939645885035 1.1061357208882383 1.0193765973987348 1.1183173026937907 0.7853926108468587 0.5656499304275638 0.5625178881195734 0.6936121839607506 0.7408278958879059 1.0791947243800037 1.0 11.705851504469397 -6.768171258287994 24.9603451190943 0.807273063413392 1.0500487989850869 0.40593166051630725 0.15561233122981455 146.38721055111282 542774.2845353858 0.025236717353380282 0.04846926349004876 1.7054097505974931e-07 6.768171258287994 0.24277573557169485 RRPSPQPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RRPSPQPSPR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RRPS(0.015)PQPS(0.985)PR;RRPS(0.012)PQPS(0.988)PR 53.967 0.006606999999999999 10204100.0 1525.5700000000002 1514.4099999999999 1543.71 1173.52 1618.67 1323.75 1238.71 1395.95 1040.29 1703.92 2163.6 True False 1680.4447433347252 1642.0346455223569 1648.4754436823378 1246.0056651427074 1504.9802033083502 1312.9698188879133 1285.8497868981212 1368.1066821484098 996.5702290059231 1596.3342004071937 1897.490916190425 0.8856141175677081 0.8653715448709787 0.8687659211523219 0.6566596206132578 0.7931422440376605 0.691950516171087 0.6776579407714426 0.7210082907248616 0.5252042160005319 0.8412868735161796 1.0 10.88987726374241 -6.164264588722318 9.67361804830821 0.7492825723172605 0.8731016943465727 0.21501474699266165 0.1134099180805502 0.8347898394652052 78.12898700451314 0.023618542174821056 0.06262485468392909 6.850707281346422e-07 6.164264588722318 0.12381912202931222 RRPT(ph)LGVQLDDK ddPTM_A549_MK2206_60min_R1 4 RRPTLGVQLDDK 12 2 Q13769;H7C072 Q13769 THOC5 THO complex subunit 5 homolog 1 RRPT(1)LGVQLDDK;RRPT(1)LGVQLDDK;RRPT(1)LGVQLDDK;RRPT(1)LGVQLDDK 117.0 7.8905e-06 29169900.0 8348.3 7890.64 7373.51 5779.539999999999 7792.400000000001 5951.95 5806.950000000001 7106.47 8801.0 8076.71 9385.1 True False 9757.288943661091 8292.239872351576 8419.184592638923 7195.527559453412 6646.14828252986 6581.7813984153445 6861.997648621703 8113.833885151621 6807.587552309036 6252.175601481288 7054.520654417017 1.3831257177696124 1.1754505059333253 1.1934453104715848 1.0199881624767952 0.9421119602745135 0.9329877564812744 0.9727092717951332 1.1501609085333588 0.9649964732964005 0.8862651210138055 1.0 12.784332341547014 -5.662164069946869 1.0538996992961274 0.9880514481647538 1.419749790314641 0.7519793252140575 0.07132078351429177 0.3450207056468608 0.45495710473881273 0.009645576338414268 0.1414460649424904 2.176887221620059e-06 5.662164069946869 0.4316983421498872 RRPT(ph)LGVQLDDK ddPTM_A549_PD325901_60min_R1 4 RRPTLGVQLDDK 12 2 Q13769;H7C072 Q13769 THOC5 THO complex subunit 5 homolog 1 RRPT(1)LGVQLDDK;RRPT(1)LGVQLDDK;RRPT(1)LGVQLDDK;RRPT(1)LGVQLDDK 112.17 9.298700000000001e-05 38724600.0 6079.5 7718.999999999999 8787.6 9169.6 9407.7 7274.3 6428.2 6304.9 6882.0 8226.1 8900.300000000001 True False 6696.686364508648 8369.507219832858 9383.979380131575 9735.985366327443 8746.935606803105 7215.0605125864795 6672.828668646012 6179.143823401633 6592.773472799669 7706.702642124992 7805.61952365024 0.8579314357071035 1.0722412480488057 1.2022081465409715 1.2473046292902683 1.1205946664836497 0.9243418143461354 0.854874958794496 0.7916275965897968 0.8446188611710103 0.987327478462723 1.0 12.930297426567725 -7.281558406589224 6.241323851294683 0.9072352464614688 1.1126389845076172 0.4569624028663605 0.10785738189408794 0.13231805882792222 20.92837622194982 0.01763658673162521 0.028919370081361563 5.2292763493297256e-08 7.281558406589224 0.20540373804614842 RRRDS(ph)DGVDGFEAEGK ddPTM_A549_MK2206_60min_R1 2 RRRDSDGVDGFEAEGK 16 3 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRRDS(1)DGVDGFEAEGK;RRRDS(1)DGVDGFEAEGK 129.46 1.4861000000000002e-10 58160000.0 2853.7 3085.3 2985.3 2203.25 4357.299999999999 3243.2 3370.8999999999996 3169.0 5835.5 4447.5 4750.9 True False 3335.3347937335366 3242.3285916182126 3408.6604296196742 2743.04634890765 3716.3469420804067 3586.393271338074 3983.348896363649 3618.2154546554725 4513.768567378635 3442.8066610770998 3571.1204118304313 0.9339743299285618 0.907930346139269 0.9545072796558306 0.768119254623974 1.0406669374039779 1.0042767696818755 1.1154339358503804 1.0131877498918895 1.2639642596271448 0.9640690494982322 1.0 11.802161064517701 -7.350641356164254 1.4156338216757096 1.1184556563953036 0.9011191392322577 0.32847872931474764 0.09718334186258089 0.2893080052226147 1.139276171695393 0.01758820803860585 0.03359202630285941 4.4602442687177687e-08 7.350641356164254 -0.21733651716304592 RRRDS(ph)DGVDGFEAEGK ddPTM_A549_PD325901_60min_R1 2 RRRDSDGVDGFEAEGK 16 3 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRRDS(1)DGVDGFEAEGK;RRRDS(1)DGVDGFEAEGK 157.14 6.533e-21 71765000.0 9577.2 9050.7 9247.7 10514.4 9019.8 9316.1 7906.299999999999 9243.400000000001 10312.400000000001 11121.2 11490.6 True False 10549.470293637993 9813.434252434416 9875.304532937638 11163.850608065037 8386.280364620743 9240.232770343113 8207.17857299337 9059.033135692975 9879.00569033701 10419.005534044138 10077.329044914815 1.0468518241906002 0.9738130221505901 0.9799525736356578 1.1078184068722554 0.8321927692588937 0.9169327238556217 0.8144200250298314 0.898951805117876 0.9803198492682064 1.0339054612195815 1.0 13.298825688598466 -6.740478684131503 24.999843734699624 0.9550683087164601 1.0199337210899426 0.2481715193605445 0.0741800490083919 406.51059751349175 484843.0711792675 0.011445205330295917 0.023804963203644117 1.8176962693492308e-07 6.740478684131503 0.06486541237348253 RRRS(ph)PS(ph)PPPTR ddPTM_A549_MK2206_60min_R1 2 RRRSPSPPPTR 11 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRRS(1)PS(1)PPPTR;RRRS(1)PS(1)PPPTR 60.401 0.0027963000000000003 14264100.0 475.9 368.41999999999996 417.55 438.67 402.03 221.33299999999997 245.64 114.94 534.01 890.1500000000001 564.58 True False 556.2202853620877 387.1710043509481 476.7648686522946 546.1441696926448 342.89191956592055 244.75431115104527 290.2696083843387 131.23309698898717 413.0575876387399 689.0644967639757 424.3792043846906 1.310668099697661 0.9123232249617631 1.1234406957889425 1.2869249106692253 0.8079847363470158 0.5767349309821053 0.6839864097610578 0.3092354564811032 0.9733219332404236 1.6236999590096637 1.0 8.729210152186342 -6.773108728797821 24.99545116362657 0.8696841468741489 1.138273919398352 0.17000851801425887 0.321582172208384 280.5783211816866 600992.1012402835 0.03811226993889499 0.07244596039813539 1.6861308373628833e-07 6.773108728797821 0.26858977252420313 RRRS(ph)PS(ph)PPPTR ddPTM_A549_PD325901_60min_R1 3 RRRSPSPPPTR 11 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRRS(1)PS(1)PPPTR;RRRS(1)PS(1)PPPTR;RRRS(1)PS(0.999)PPPT(0.001)R 102.5 7.6912e-05 45707200.0 980.21 1184.8 1114.93 1289.92 1241.1100000000001 1481.9900000000002 1108.31 1205.47 1383.45 1184.42 1234.05 True False 1079.7201976075362 1284.6472540559616 1190.5958544187374 1369.595428779127 1153.9387151970614 1469.9211647922195 1150.487343540503 1181.425955177079 1325.3084075769677 1109.6355190656186 1082.2696732874813 0.9976443249377941 1.1869936724307744 1.1000916719787655 1.2654844375513827 1.0662210571713422 1.3581838252264944 1.0630320445419161 1.0916188306269383 1.2245639328978302 1.025285607139865 1.0 10.079844310480379 -10.959131727310996 1.1736256772539213 0.9983643653438017 1.1594579106626133 0.21781752606184146 0.09930436191898695 0.5154678168424202 1.24088049237278 0.0682644033661861 0.015188474893563309 1.0986725468463804e-11 10.959131727310996 0.1610935453188116 RRRS(ph)S(ph)DEDAAGEPK ddPTM_A549_PD325901_60min_R1 1 RRRSSDEDAAGEPK 14 3 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 2 RRRS(1)S(1)DEDAAGEPK 50.053000000000004 0.008899299999999999 2973300.0 543.27 708.79 561.92 689.08 465.88 591.48 393.96 659.44 653.45 862.28 831.94 True False 598.4223704657641 768.522220798721 600.0552702994598 731.6429065857735 433.1581959987484 586.6631829845691 408.95236338318387 646.2869518793275 625.9877689335866 807.8354936423742 729.6166541021735 0.8201873779898158 1.0533232985812566 0.8224254023338532 1.0027771467005415 0.5936791513233334 0.8040704384777029 0.560503054698523 0.8857897475964457 0.8579680376181833 1.1072053921746792 1.0 9.510994850357969 -10.00900385863163 0.8579211949105073 0.9863466508129665 0.8204801065606934 0.25495441283254205 0.14388941265046215 0.6990369711087175 1.04042023534221 0.058754983578202746 0.027937670364023733 9.794812828476347e-11 10.00900385863163 -0.1658665442522731 RRRT(ph)DEDAVLMDGMTESDTASVNENGLGK ddPTM_A549_MK2206_60min_R1 1 RRRTDEDAVLMDGMTESDTASVNENGLGK 29 3 E7EU85;E9PFF5;P51114-2 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RRRT(0.991)DEDAVLMDGMT(0.004)ES(0.004)DT(0.001)AS(0.001)VNENGLGK 62.051 0.00015097 7424000.0 1626.3 1237.9 1764.1 1827.0 2059.3 1591.2 1648.3 1458.9 2239.0 2229.1 2671.9 True False 1900.7796807824398 1300.9038225015988 2014.2759065728965 2274.6150820171465 1756.3796979382141 1759.579727846925 1947.774774059212 1665.7035426938687 1731.8700749482941 1725.5447618228143 2008.3934893114445 0.9464179658509554 0.6477335389827416 1.0029289167151547 1.1325544989677163 0.8745197130370949 0.8761130411999978 0.9698173114109153 0.8293711125626766 0.8623161169189244 0.8591666777481928 1.0 10.971826237946546 -9.728155130109664 0.010263056629991708 1.863318932276643 4.7754162330014763e-05 0.0 0.1196120931157462 5003.355226583846 20.20938241265878 1882.1935737279648 1785.7439417790401 1.8700140515131003e-10 9.728155130109664 -1.863271178114313 RRRT(ph)DEDAVLMDGMTESDTASVNENGLGK ddPTM_A549_PD325901_60min_R1 1 RRRTDEDAVLMDGMTESDTASVNENGLGK 29 3 E7EU85;E9PFF5;P51114-2 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RRRT(0.938)DEDAVLMDGMT(0.018)ES(0.018)DT(0.018)AS(0.008)VNENGLGK 43.732 0.007588600000000001 12647000.0 3207.9 3986.0 3899.7 2898.1 3721.2 3832.9 2962.2 3945.8 3137.8 3872.9 4446.5 True False 3533.5636464688337 4321.914208868215 4164.357092801116 3077.1090549373534 3459.835749443082 3801.686133193945 3074.9281419780373 3867.097923579781 3005.9291779934306 3628.364433046753 3899.6086886858607 0.9061328785939337 1.1082943325589594 1.0678910181125054 0.789081495244672 0.8872263926073621 0.974889132908124 0.7885222306790647 0.9916630698868825 0.7708284133007218 0.9304432117955623 1.0 11.92911364678664 -6.243799986472222 24.859004157365913 0.8894885562297541 1.0355249144052625 0.310120972218484 0.0899845137565624 767.9323236764556 1082236.913135242 0.014035767841231355 0.03704302551342437 5.704269208680169e-07 6.243799986472222 0.14603635817550842 RRRT(ph)PT(ph)PPPR ddPTM_A549_MK2206_60min_R1 2 RRRTPTPPPR 10 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRRT(1)PT(1)PPPR;RRRT(1)PT(1)PPPR 65.295 0.0041193 53536000.0 1511.48 1354.06 853.0 1118.88 1100.78 746.1600000000001 1003.0 879.74 1359.5 1751.5300000000002 1647.67 True False 1766.5808718619207 1422.9758703421244 973.9682264648725 1393.005650228432 938.8567201944481 825.1181559390782 1185.2321169577092 1004.4458390907562 1051.575420675393 1355.858156509585 1238.5080656213884 1.4263781729799119 1.1489435635029024 0.7864044276338321 1.1247449159965934 0.7580545870110276 0.6662194448649773 0.9569837693088019 0.8110127555663533 0.8490662676046385 1.0947511721123264 1.0 10.274387548639249 -5.473473967098678 2.9571431155680292 0.8985382261090094 1.42579210479064 0.5842147335652488 0.1362996577157701 0.14097527506197516 2.1658730698355995 0.017354098689888815 0.13611063991144465 3.3614451794408186e-06 5.473473967098678 0.5272538786816305 RRRT(ph)PT(ph)PPPR ddPTM_A549_PD325901_60min_R1 2 RRRTPTPPPR 10 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRRT(1)PT(1)PPPR;RRRT(1)PT(1)PPPR 84.365 0.00066577 85873000.0 1060.63 916.6199999999999 1067.3600000000001 947.54 948.77 965.96 1048.68 1237.0700000000002 1083.91 715.25 1202.4099999999999 True False 1168.3043768054613 993.8667842781697 1139.7974681570895 1006.0673937805249 882.1316682788116 958.0935420230178 1088.588091259715 1212.3956683873596 1038.3570320985593 670.088992934671 1054.5211927049963 1.107900329445817 0.9424815652388744 1.0808672941255428 0.954051374918146 0.8365234140207451 0.9085578826209951 1.0323055608463707 1.1497119989380136 0.9846715640062447 0.6354438370420965 1.0 10.042372373917134 -5.245081366836903 23.15828093784939 0.9906187973683994 1.1079005844669245 0.03647668302156615 0.13334835028306527 1671.825546925322 2366720.3964618854 0.010894555197385185 0.3577046298729578 5.687463639176381e-06 5.245081366836903 0.1172817870985251 RRS(ph)AEDELAMR ddPTM_A549_PD325901_60min_R1 1 RRSAEDELAMR 11 2 A3KFL1;A3KFL5;A3KFL2;Q13868-3;Q13868-2;Q13868 A3KFL1 EXOSC2 Exosome complex component RRP4 1 RRS(1)AEDELAMR 53.49100000000001 0.010137 22563000.0 1726.9 2289.6 2522.9 2189.3 2672.0 2324.8 2339.3 2565.7 2555.7 2838.6 2959.7 True False 1902.2136167234112 2482.5526273518985 2694.119165430147 2324.5280887389486 2484.3279378995794 2305.867599584985 2428.3233416140783 2514.5251007472866 2448.2928166861516 2659.370311561495 2595.67566308412 0.7328394852164412 0.9564186553269867 1.0379259642281573 0.8955387307430388 0.957102604625017 0.8883496626251093 0.9355264897498027 0.9687362471779651 0.9432198527365889 1.0245387547386002 1.0 11.341894410490353 -5.262620689059847 6.737032896250666 0.9623176193067298 0.728952334876873 0.6812584552105423 0.044816219150973155 0.04558770059967643 13.958482694502468 0.0058060976939795905 0.048591050589868845 5.462347318874849e-06 5.262620689059847 -0.2333652844298567 RRS(ph)AEVDDGAAEKETLPEFGEGK ddPTM_A549_PD325901_60min_R1 1 RRSAEVDDGAAEKETLPEFGEGK 23 3 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 RRS(1)AEVDDGAAEKETLPEFGEGK 91.615 2.62e-07 6340600.0 2058.5 2313.1 2926.7 2151.2 2936.4 2675.7 2165.6 2731.7 2915.2 3542.8 3288.5 True False 2267.4774046123925 2508.0330548251573 3125.3234616768036 2284.0747382703266 2730.157394030062 2653.9099863255074 2248.0130930617916 2677.2141005228054 2792.684281881078 3319.1070033819688 2884.03534751905 0.7862169257262944 0.8696263230555259 1.0836633692320443 0.7919718252535182 0.9466449141750778 0.9202071634137547 0.7794679406393589 0.9282875478020199 0.9683252614373968 1.1508551745862556 1.0 11.493873131410702 -8.696410184178646 3.269029553769109 0.9858803437932795 0.8884329135601147 0.29418551133766646 0.09651080291902892 0.2671402648600435 5.714528503444434 0.013915706043880169 0.015490576272837068 2.0118232174666937e-09 8.696410184178646 -0.09744743023316482 RRS(ph)AS(ph)PPPATSSSSSSR ddPTM_A549_PD325901_60min_R1 2 RRSASPPPATSSSSSSR 17 2 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 RRS(0.999)AS(0.999)PPPATSSSSSSR;RRS(0.999)AS(0.996)PPPAT(0.003)S(0.001)SSSSSR 64.318 0.0022432 38745000.0 1546.32 1548.71 1593.25 1510.71 2063.57 1308.51 1467.02 1609.67 1832.57 1742.3600000000001 1819.17 True False 1703.3012680593808 1679.2252268982168 1701.3775259905597 1604.0231256286556 1918.63196213003 1297.8539283951077 1522.8482488841476 1577.5638690883138 1755.5534558338386 1632.3470922469826 1595.423622668763 1.0676169287315453 1.0525262400773994 1.066411141101547 1.0053901063251824 1.2025846520440862 0.8134854655242648 0.9545102800576475 0.9888056354897302 1.100368222514605 1.0231433639652743 1.0 10.639723829139857 RRS(ph)DDDDRSSDR ddPTM_A549_MK2206_60min_R1 1 RRSDDDDRSSDR 12 3 Q09161;X6R941 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RRS(1)DDDDRSSDR 53.995 0.0063437 18565000.0 196.0 185.85 207.05 144.25 0.0 0.0 0.0 0.0 0.0 298.96 411.46 True False 229.0800082600739 195.30897117046786 236.41280338751668 179.5912564756285 0.0 0.0 0.0 0.0 0.0 231.42472836326252 309.28312628170465 0.7406805893814612 0.631489255552126 0.7643895941875102 0.5806694294471507 0.0 0.0 0.0 0.0 0.0 0.7482617339831004 1.0 8.272784315494958 -10.917028816131324 1.201887015297661 0.9954938311350374 0.27334416816173923 0.3160083380851486 0.316989918780093 0.4126672507050182 1.0695487654001907 0.24177231555929868 0.05876175607648267 1.2105178110989036e-11 10.917028816131324 -0.7221496629732982 RRS(ph)DDDDRSSDR ddPTM_A549_PD325901_60min_R1 2 RRSDDDDRSSDR 12 3 Q09161;X6R941 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RRS(0.998)DDDDRS(0.001)SDR;RRS(0.998)DDDDRS(0.001)S(0.001)DR 41.621 0.027260000000000003 61972000.0 136.81 193.49 194.707 172.69400000000002 138.92 106.66 147.76 261.55 377.04999999999995 204.48700000000002 236.46 True False 150.6988504858011 209.79608135321408 207.9209878883061 183.36091616346957 129.16273844798266 105.79139632301032 153.38308765737452 256.33318006799436 361.20389972669483 191.57565592203034 207.37691904344058 0.7266905650875893 1.0116655330831044 1.0026235747323045 0.8841915339915903 0.6228404734903314 0.510140650227567 0.7396343255791372 1.2360738179078579 1.74177483874679 0.9238041379228888 1.0 7.69611152156054 -8.337707060262275 4.765599681831504 1.3556258395230658 0.7895366916280137 0.38880758466349274 0.24915202271593034 0.15822336328341 6.677043589698309 0.0500438219921538 0.060953451899144355 4.595078549566378e-09 8.337707060262275 -0.5660891478950522 RRS(ph)DLYESELR ddPTM_A549_MK2206_60min_R1 2 RRSDLYESELR 11 2 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 RRS(1)DLYESELR;RRS(1)DLYESELR 115.06 7.1126e-06 44112000.0 2163.71 2145.16 1817.02 1918.0500000000002 2852.8 1930.56 1602.21 2072.69 3154.8 2632.1000000000004 2902.8999999999996 True False 2528.8913503694107 2254.339481280823 2074.7007583249715 2387.972336104536 2433.1568990813084 2134.8505777979867 1893.3108176578364 2366.5001548469095 2440.2428371803835 2037.5067819271587 2182.0298140357763 1.1589627850648365 1.0331387164281254 0.9508122872472149 1.0943811678209192 1.1150887505890947 0.9783782806567023 0.867683294462444 1.084540705917279 1.1183361572255646 0.9337667014543147 1.0 11.09145509863695 -3.7357477180469245 15.406057180514946 1.04563307179578 1.0440990560486343 0.0 0.08881877210150095 0.0 0.0 0.011151090550500337 0.0 0.00018376054996180466 3.7357477180469245 -0.0015340157471457339 RRS(ph)DLYESELR ddPTM_A549_PD325901_60min_R1 1 RRSDLYESELR 11 2 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 RRS(0.999)DLYES(0.001)ELR 48.351000000000006 0.0099942 25350000.0 2146.9 2539.0 2147.6 2055.1 2457.7 2672.0 2383.6 2591.2 2363.7 2710.0 3081.1 True False 2364.851707535753 2752.970440621275 2293.349050567911 2182.03885952926 2285.079630604715 2650.240117898776 2474.3092023559693 2539.5164832429246 2264.361908988168 2538.8901375085075 2702.1442327021277 0.8751759728128634 1.018809583627711 0.8487145219019548 0.8075212392890052 0.8456542041501794 0.9807915083972228 0.9156836161486743 0.9398152965000774 0.837987062860749 0.9395835006814691 1.0 11.399888968300717 -7.245366441067798 24.767348196643695 0.9260028627842481 0.8812595551132221 0.1574769958335499 0.06283249015463964 1664.4985271898927 2564882.5745352632 0.01136655684189941 0.019651899935983774 5.683731569409059e-08 7.245366441067798 -0.04474330767102608 RRS(ph)DSTLFSTVDTDEIPAK ddPTM_A549_MK2206_60min_R1 2 RRSDSTLFSTVDTDEIPAK 19 2 Q9HC62;F8WED6;F8WCX8;F8WED7;F8WET6 Q9HC62 SENP2 Sentrin-specific protease 2 1 RRS(0.328)DS(0.328)T(0.328)LFS(0.009)T(0.009)VDTDEIPAK;RRS(0.295)DS(0.295)T(0.295)LFS(0.057)T(0.057)VDT(0.001)DEIPAK 78.987 6.442e-05 3256200.0 921.4100000000001 745.45 787.04 721.4100000000001 1098.94 732.48 805.3900000000001 880.96 1184.46 1235.53 965.06 True False 1076.92148168834 783.390220925613 898.6541066317851 898.1554823853252 937.2873817570149 809.9905474191268 951.71893786298 1005.83877782685 916.1817011939512 956.4229148871475 725.408967698979 1.4845715033057423 1.0799290549309755 1.2388240932316363 1.2381367233910876 1.2920813272134217 1.1165984754619773 1.3119756995586416 1.3865816699473725 1.2629864559023987 1.3184602858177399 1.0 9.50265077017373 -10.532393404935698 0.8544205304962306 1.0007614428529756 1.2604125153496233 0.0 0.14082078866772146 0.4171309640413157 0.5493001322516279 0.06637007844408938 0.019048652947871402 2.9349897917963206e-11 10.532393404935698 0.25965107249664765 RRS(ph)EVVESTTESQDKENSHQK ddPTM_A549_MK2206_60min_R1 2 RRSEVVESTTESQDKENSHQK 21 3 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RRS(1)EVVESTTESQDKENSHQK;RRS(1)EVVESTTESQDKENSHQK 145.14 2.0947000000000001e-22 70796000.0 2888.2 3143.8 2468.2 1924.7399999999998 3247.7 3141.7 2768.8 2694.6000000000004 4777.9 5249.6 4995.799999999999 True False 3375.657550289517 3303.8059917445066 2818.2278740452493 2396.3013864048617 2769.9676322021737 3474.1526087083216 3271.8551200722877 3076.567801866406 3695.7132787384785 4063.711713994457 3755.2049829342795 0.8989276392714551 0.8797937813671481 0.7504857622560764 0.638127984303114 0.737634202337937 0.9251565825292588 0.8712853585733402 0.8192809223059794 0.984157534817363 1.0821544316388059 1.0 11.874675946007827 -8.474205918262042 0.8966061703749941 0.9993873674347462 0.7911251758993179 0.5403313767678353 0.0835463515891267 0.30832971794662095 0.49036212366930326 0.01872156726361648 0.022483396556267517 3.3557846389306417e-09 8.474205918262042 -0.20826219153542835 RRS(ph)EVVESTTESQDKENSHQK ddPTM_A549_PD325901_60min_R1 2 RRSEVVESTTESQDKENSHQK 21 3 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RRS(1)EVVESTTESQDKENSHQK;RRS(1)EVVESTTESQDKENSHQK 262.19 2.1156999999999993e-112 132531000.0 8418.9 9746.6 9097.6 10574.3 10822.2 12410.099999999999 8710.5 10203.9 10861.3 13166.1 15078.0 True False 9273.580530333391 10567.980187695679 9715.017844313015 11227.450495022274 10062.086006563193 12309.036260155537 9041.98284406849 10000.375209695307 10404.837332188166 12334.790199059309 13223.501587317078 0.7012953769543058 0.7991816780081638 0.7346781622222424 0.8490527581431793 0.7609244752701463 0.9308454480741605 0.6837812801974354 0.7562577236945216 0.7868443364628663 0.9327930365199072 1.0 13.690816633078086 -10.543751273414284 0.6957618841868924 1.012271517456128 0.778543298669336 0.525762929614948 0.06779801131624749 0.4102306758260753 0.3301845456281686 0.0543725152504585 0.012649033373249699 2.859227594589045e-11 10.543751273414284 -0.23372821878679206 RRS(ph)FLESNYFTKPNLK ddPTM_A549_MK2206_60min_R1 2 RRSFLESNYFTKPNLK 16 3 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 RRS(0.999)FLES(0.001)NYFTKPNLK;RRS(1)FLESNYFTKPNLK 144.01 7.6654e-15 24144000.0 6364.5 5915.9 5535.8 5262.1 9886.900000000001 8237.7 8781.4 7432.5 12790.599999999999 9359.9 10857.3 True False 7438.672002914487 6216.994041148078 6320.859681200751 6551.314736224649 8432.550107097235 9109.407946257295 10376.866711717268 8486.079636076625 9893.549522391086 7245.492089267134 8161.132763764042 0.9114754309527561 0.7617807749375105 0.7745076405650179 0.8027457616316341 1.0332573125802222 1.1161940639789194 1.2714983338821821 1.0398163933511007 1.2122765072906407 0.8878047078755524 1.0 12.994553696570136 -6.8559893153766165 3.372309933907983 1.1119330288379117 0.8040912147483841 0.6039086291198452 0.10370245191421625 0.10447987149351438 2.3513480072814 0.014012047241732129 0.028186145602604178 1.3931910781651874e-07 6.8559893153766165 -0.3078418140895276 RRS(ph)FLESNYFTKPNLK ddPTM_A549_PD325901_60min_R1 2 RRSFLESNYFTKPNLK 16 3 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 RRS(1)FLESNYFTKPNLK;RRS(1)FLESNYFTKPNLK 137.05 4.6988000000000006e-11 34684000.0 6810.9 7996.6 8249.5 8655.099999999999 7883.1 9572.5 6959.0 8647.1 9976.3 11322.1 10457.7 True False 7502.337554080423 8670.501546070145 8809.360678273411 9189.705869841711 7329.4182512186335 9494.544733752258 7223.8285531109195 8474.626806981278 9557.030804517777 10607.22067375833 9171.469196822252 0.8180082594269462 0.9453776009054597 0.9605179376632148 1.0019884134840444 0.7991542133465535 1.0352261486133483 0.787641368911084 0.9240206367282553 1.0420392414150086 1.1565454177650771 1.0 13.1629371453296 -8.712642776614867 6.91535754898731 1.0198234848155783 0.9111228807952332 0.36275178185199364 0.08708313173274199 0.1786506373255888 19.68266245403599 0.012071229394094319 0.013627917709253694 1.9380153983669015e-09 8.712642776614867 -0.10870060402034509 RRS(ph)FNDFR ddPTM_A549_MK2206_60min_R1 2 RRSFNDFR 8 2 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 RRS(1)FNDFR;RRS(1)FNDFR 93.05799999999999 0.00084362 49673000.0 3941.6 4687.6 4326.4 3481.1 8088.4 5325.0 4878.6 4832.700000000001 9111.7 7774.3 7780.3 True False 4606.84571713218 4926.178817641565 4939.94857558924 4333.969656272515 6898.607074638689 5888.487965551074 5764.978470378739 5517.7500245230385 7047.9144983949855 6018.080230514153 5848.236784643822 0.787732420347401 0.8423357328103784 0.8446902472486159 0.741072876469804 1.1796046105302895 1.0068826181957855 0.9857635185901329 0.9434895042231244 1.2051349420223976 1.0290418210008703 1.0 12.513786009275925 -6.756907453267044 24.99999834834707 1.076457413045488 0.8096085329123487 0.669685895168511 0.08175090713447061 57.48904195572332 317129.52056129195 0.014131757143580823 0.02865929246405413 1.750219614961275e-07 6.756907453267044 -0.26684888013313934 RRS(ph)FNDFR ddPTM_A549_PD325901_60min_R1 1 RRSFNDFR 8 2 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 RRS(1)FNDFR 65.347 0.006789399999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RRS(ph)FPDIEDEEK ddPTM_A549_MK2206_60min_R1 2 RRSFPDIEDEEK 12 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RRS(1)FPDIEDEEK;RRS(1)FPDIEDEEK 84.41 0.00015859 22042000.0 3161.6000000000004 2523.04 2236.59 2399.83 3461.7 2600.5 2487.67 2478.56 3660.3 3086.7 3441.4 True False 3695.2007863012755 2651.4519592248416 2553.7720933517794 2987.788457732463 2952.488515686261 2875.683183927808 2939.647438077947 2829.9034702716544 2831.247894298008 2389.4123261937466 2586.8054021918474 1.4284803886563189 1.0249908852742529 0.9872300758255421 1.1550109085132014 1.1413647556111348 1.1116735651979035 1.1364006877313346 1.0939761714869722 1.094495895168241 0.9236923365666215 1.0 11.336955813036365 -2.0000093408776 0.016058095158652155 2.955059859772003e-06 2.4754541556674816 0.3077403513421302 0.10452076033872676 4222.837402241399 5.090688987053721 306.88057792873616 500.1168839319271 0.00999978492065782 2.0000093408776 2.4754512006076217 RRS(ph)FPDIEDEEK ddPTM_A549_PD325901_60min_R1 1 RRSFPDIEDEEK 12 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RRS(1)FPDIEDEEK 45.14 0.017238999999999997 9278700.0 1485.5 1421.3 1609.9 1497.3 1727.3 1456.7 958.79 1533.8 1800.4 2151.4 1959.8 True False 1636.3068664326995 1541.0779390527844 1719.1574951151424 1589.7848203849746 1605.9804068615065 1444.837118167346 995.2772781200192 1503.2071557571767 1724.735449059651 2015.560236839779 1718.757024195783 0.9520291951669768 0.89662350021456 1.000233000309946 0.9249619335396431 0.9343847817075567 0.8406290696286138 0.5790680498226418 0.874589679981402 1.0034783420691271 1.1726847998092529 1.0 10.747149894187745 -8.759690884940737 14.103561082782013 1.0016452922594843 0.872777797582501 0.3030720485210705 0.11527660020762337 0.24425918129890442 1868.9052452541769 0.018737737209858767 0.02065679620265856 1.7390381726408764e-09 8.759690884940737 -0.12886749467698333 RRS(ph)GASEANLIVAK ddPTM_A549_MK2206_60min_R1 4 RRSGASEANLIVAK 14 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RRS(0.5)GAS(0.5)EANLIVAK;RRS(0.544)GAS(0.456)EANLIVAK;RRS(0.5)GAS(0.5)EANLIVAK;RRS(0.5)GAS(0.5)EANLIVAK 98.572 1.2543e-05 47290100.0 7003.1 8393.2 7358.4 7088.48 10027.899999999998 7771.9 7034.800000000001 6695.94 12464.6 13162.5 12037.599999999999 True False 8185.0520706434845 8820.378029744264 8401.931767431555 8825.157918213963 8552.8091938788 8594.31729943031 8312.932100073871 7645.110000456226 9641.388001876056 10189.082108246737 9048.331699141218 0.9045923981124977 0.9748071051132455 0.9285614240058184 0.9753353669662181 0.9452360366818285 0.9498234133311008 0.9187253934184194 0.8449192906115309 1.0655431655750558 1.1260730095928941 1.0 13.143436102134679 -8.783486934174427 24.999987215675628 1.0309509436285922 0.9339496438741621 0.5971484483809739 0.046722929165489716 126.51246126915103 143453.34583028578 0.006991605873475089 0.007445957796085706 1.6463154952733483e-09 8.783486934174427 -0.09700129975443006 RRS(ph)GASEANLIVAK ddPTM_A549_PD325901_60min_R1 4 RRSGASEANLIVAK 14 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RRS(0.563)GAS(0.437)EANLIVAK;RRS(0.853)GAS(0.147)EANLIVAK;RRS(0.964)GAS(0.036)EANLIVAK;RRS(0.898)GAS(0.102)EANLIVAK 127.61 4.0724e-09 99741000.0 16542.6 16859.899999999998 19693.899999999998 17938.8 19902.4 18612.9 19287.7 19620.9 20294.8 20418.7 21804.699999999997 True False 18221.992573981537 18280.7429428242 21030.446483041236 19046.83893402924 18504.524083552624 18461.32271348732 20021.703978134425 19229.54575720171 19441.880133068098 19129.459797322863 19122.86013138166 0.9528905429830681 0.9559628014443561 1.0997542385685874 0.9960245906297424 0.9676650854746193 0.9654059375350069 1.047003630240317 1.005578957597717 1.0166826509996225 1.000345119186976 1.0 14.22301069725975 -7.741290886738332 24.999095758845577 1.0105367028881234 0.992387118722775 0.07985179116758878 0.039742221784210545 691.6788041100434 858192.3968870966 0.006102202360234099 0.009045204642859761 1.8143000530211853e-08 7.741290886738332 -0.018149584165348398 RRS(ph)GEQITSSPVSPK ddPTM_A549_MK2206_60min_R1 2 RRSGEQITSSPVSPK 15 2 A0A087WZV0;O43314;O43314-2;A0A087WWN8 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 RRS(0.958)GEQIT(0.034)S(0.006)S(0.001)PVSPK;RRS(0.957)GEQIT(0.039)S(0.002)S(0.002)PVSPK 61.102 0.001756 12911100.0 6708.0 7126.9 6274.299999999999 5000.5 7996.2 6614.0 5657.9 5852.1 8193.599999999999 9047.5 9551.2 True False 7840.146405145796 7489.628768548869 7164.09008594202 6225.622724480979 6819.96957250209 7313.889089982128 6685.86719295615 6681.653096304605 6337.762682490548 7003.663466238354 7179.373440290225 1.0920376924742976 1.0432148196272266 0.9978712133481683 0.8671540457198044 0.9499393824854993 1.0187364051766703 0.931260540848238 0.9306735680870921 0.8827737873229151 0.9755257230295619 1.0 12.809642227035045 -5.807441963281271 2.597958970200189 0.9429593452240861 1.078499781248 0.5436448464350723 0.04365579850216039 0.18398963366891746 2.4314151849598518 0.007270293526844747 0.03319714800163109 1.5579662189318152e-06 5.807441963281271 0.13554043602391386 RRS(ph)GEQITSSPVSPK ddPTM_A549_PD325901_60min_R1 2 RRSGEQITSSPVSPK 15 2 A0A087WZV0;O43314;O43314-2;A0A087WWN8 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 RRS(0.98)GEQIT(0.012)S(0.003)S(0.005)PVSPK;RRS(0.932)GEQIT(0.037)S(0.016)S(0.016)PVSPK 63.69 0.0014395999999999999 15470500.0 4930.3 5156.1 5226.9 5380.0 6235.4 6083.5 5633.5 6056.0 5998.7 5996.3 7337.8 True False 5430.82042650497 5590.622642334525 5581.62886590306 5712.310381133487 5797.447014962215 6033.957992977996 5847.885925269484 5935.20832915991 5746.595500041172 5617.692594665037 6435.29711814666 0.8439113729793138 0.8687435155977075 0.867345945871501 0.8876529360277011 0.9008825713134837 0.9376347171233256 0.9087204239225013 0.9222897125329975 0.8929806028437377 0.8729499961740554 1.0 12.651791043983149 -14.999999999999984 0.14232454466833203 1.378206014153228 0.8516877977752872 0.0 0.041321775359255866 21.464176222309064 0.20423197729884188 2.3037799414930293 0.0496760735589472 1.0000000000000368e-15 14.999999999999984 -0.5265182163779407 RRS(ph)IQDLTVTGTEPGQVSSR ddPTM_A549_MK2206_60min_R1 4 RRSIQDLTVTGTEPGQVSSR 20 2 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 RRS(0.999)IQDLT(0.001)VTGTEPGQVSSR;RRS(0.943)IQDLT(0.057)VTGTEPGQVSSR;RRS(0.975)IQDLT(0.025)VTGTEPGQVSSR;RRS(0.753)IQDLT(0.247)VTGTEPGQVSSR 151.19 6.2616e-22 49638100.0 5474.949999999999 6510.29 6175.41 5404.0599999999995 7925.05 5420.83 5826.89 6137.889999999999 8515.9 8802.300000000001 9042.71 True False 6398.987710323932 6841.635953303122 7051.175996944235 6728.054942597472 6759.285643250252 5994.458632544272 6885.560488514156 7007.954703999772 6587.0622470978915 6813.854316537153 6797.155540900285 0.9414214036768069 1.0065439744809703 1.0373715820559706 0.9898338947980496 0.9944285668582749 0.8819069383470817 1.0130061681069258 1.0310128496885282 0.9690909980596727 1.0024567299565807 1.0 12.730715421382637 -3.7406457196620067 0.0012524674390716009 1.5573046941805648 0.40730058716092993 0.0078562938363127 0.041870582949951794 2837193.211519318 376.91623821169475 170780.53563233558 175328.50752408063 0.0001816997293210626 3.7406457196620067 -1.150004107019635 RRS(ph)IQDLTVTGTEPGQVSSR ddPTM_A549_PD325901_60min_R1 3 RRSIQDLTVTGTEPGQVSSR 20 2 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 RRS(0.965)IQDLT(0.035)VTGTEPGQVSSR;RRS(0.977)IQDLT(0.023)VTGTEPGQVSSR;RRS(0.743)IQDLT(0.257)VTGTEPGQVSSR 98.073 2.8153e-07 132381000.0 8493.1 12429.6 10422.0 19719.200000000004 14953.5 12012.4 16600.0 15149.599999999999 19359.899999999998 20253.5 23794.0 True False 9355.31325971023 13477.086013684986 11129.299592577194 20937.210198447487 13903.217746774468 11914.574997098527 17231.72208386854 14847.429343368714 18546.270728865766 18974.690553516073 20867.488842593364 0.4483200317143466 0.6458412948172486 0.5333320015899944 1.0033411473886504 0.6662621387579766 0.5709635254616392 0.8257688413709016 0.7115101129496284 0.8887638981749602 0.9092943907455777 1.0 14.348969379073958 -5.416127680920212 0.11718280433137292 1.175354746335042 3.0786823741198896e-12 0.4804606401463126 0.13151541405505585 18.058219437005857 0.3453565966841504 0.7187203277837493 3.5641355250073947 3.8359445360751155e-06 5.416127680920212 -1.1753547463319634 RRS(ph)KDVEFQDGWPR ddPTM_A549_PD325901_60min_R1 1 RRSKDVEFQDGWPR 14 3 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RRS(1)KDVEFQDGWPR 73.928 0.00028250000000000004 12667000.0 1187.1 1286.7 1113.2 933.1 1183.8 1243.6 810.06 1064.8 1081.4 1417.8 1651.6 True False 1307.6135181031682 1395.1347246740431 1188.7484462154025 990.7354677761441 1100.6539718882948 1233.4725339142658 840.8872765818409 1043.5617286805596 1035.9525186697992 1328.2798660367378 1448.4636703550136 0.9027589333895247 0.9631824071445991 0.8206960730496224 0.6839905536141739 0.7598768228812589 0.8515729867162949 0.5805373609237587 0.7204610996040971 0.7152078024959305 0.9170267043778743 1.0 10.50030778476509 -10.812231689488074 1.0761375680462069 0.9990701117517158 0.7726645033229743 0.30198788491250517 0.10371306782576828 0.4373679143752907 0.9048643629225892 0.07358662891019342 0.018592497596684326 1.5408781986007845e-11 10.812231689488074 -0.22640560842874147 RRS(ph)KPLTR ddPTM_A549_MK2206_60min_R1 1 RRSKPLTR 8 3 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 RRS(0.992)KPLT(0.008)R 45.973 0.013072 12569000.0 162.25 289.04 463.2 295.04 523.39 304.43 170.67 218.48 684.75 692.21 469.95 True False 189.63383336835201 303.7509014103419 528.8887250862001 367.32481324484894 446.4000243305407 336.6445805357209 201.67852981173684 249.45020906693844 529.6552183210557 535.8392802392759 353.2484450398267 0.5368285013879449 0.8598789483025063 1.4972145879554288 1.0398483515006987 1.2636998990334174 0.9529966380963578 0.5709254566966282 0.7061608127922951 1.4993844297356784 1.5168906976472696 1.0 8.464539399765593 -8.758914001626431 24.998681337536183 1.2358204154226649 0.9489074701393704 0.25093095831668455 0.3002470965859889 99.19599218545142 981939.2618999251 0.05601980876108385 0.062096260397591356 1.7421518176546847e-09 8.758914001626431 -0.2869129452832945 RRS(ph)LAK ddPTM_A549_PD325901_60min_R1 2 RRSLAK 6 2 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 RRS(1)LAK;RRS(1)LAK 54.157 0.027594 23970000.0 7682.700000000001 8323.5 5874.0 6655.6 6865.799999999999 6513.8 5386.3 5545.7 6080.7 8962.9 10665.599999999999 True False 8462.642048295182 9024.950556325788 6272.644963231471 7066.701296035696 6383.569893724151 6460.753772443511 5591.278593996457 5435.086662982512 5825.149325203853 8396.980964381917 9353.798814808935 0.9047278240469665 0.9648433470727942 0.6705986612947692 0.7554899817652367 0.6824574721040272 0.690709079846238 0.5977548485588918 0.5810566135309306 0.6227576026096986 0.8977081002734222 1.0 13.191336683699161 -10.854925786609668 1.1331966822118371 0.99803738094861 0.7103375758914584 0.351322295243363 0.11783845705995745 0.38300521097422724 0.8825801587677814 0.08501006744581675 0.021305353437236347 1.3966069965654089e-11 10.854925786609668 -0.28769980505715165 RRS(ph)LEPAENVHGAGGGAFPASQTPSK ddPTM_A549_MK2206_60min_R1 1 RRSLEPAENVHGAGGGAFPASQTPSK 26 2 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 RRS(1)LEPAENVHGAGGGAFPASQTPSK 71.098 2.1093000000000003e-05 23514000.0 3288.9 3504.8 3007.0 2973.4 4093.0 4088.5 3494.3 3694.6 5156.8 5417.7 4529.5 True False 3843.9859141150864 3683.1793497888375 3433.4378159201315 3701.883133480997 3490.925121964316 4521.142356273345 4129.169079048177 4218.320864237964 3988.7930337174457 4193.837807243936 3404.700142159579 1.1290233364506723 1.081792579669768 1.0084405887627814 1.0872860983090618 1.0253252786455505 1.327912053190568 1.2127849462916496 1.2389698616931095 1.171554870376156 1.2317789033203412 1.0 11.733312027842501 -4.955343596654678 14.741099336618014 1.10828864541139 1.223411281444915 0.0 0.10668819962644077 4450156.052008283 43861977.603242524 0.015588459736476242 13831988.616406795 1.1082976269662153e-05 4.955343596654678 0.1151226360335249 RRS(ph)LEPAENVHGAGGGAFPASQTPSK ddPTM_A549_PD325901_60min_R1 2 RRSLEPAENVHGAGGGAFPASQTPSK 26 2 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 RRS(1)LEPAENVHGAGGGAFPASQTPSK;RRS(1)LEPAENVHGAGGGAFPASQTPSK 98.631 5.4104e-10 67206000.0 8325.0 8670.9 9062.5 9059.3 10816.7 9820.2 9374.0 9913.7 9785.8 10654.5 11701.7 True False 9170.147871458914 9401.627173526194 9677.535747239566 9618.872385836907 10056.972307589223 9740.22754707694 9730.732699649627 9715.963476352797 9374.536857036179 9981.773051691654 10262.465083187975 0.8935619071173746 0.916117823282828 0.943003037651583 0.9372867345092939 0.9799762752971125 0.9491118818063929 0.9481866803708365 0.94674753069509 0.9134780757883986 0.9726486736645612 1.0 13.325089692963273 RRS(ph)LEPAENVHGAGGGAFPASQTPSKPASADGHR ddPTM_A549_MK2206_60min_R1 2 RRSLEPAENVHGAGGGAFPASQTPSKPASADGHR 34 3 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 RRS(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR;RRS(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR 63.625 0.00022459 38013000.0 2934.8 4865.5 2667.7 4779.2 5259.6 3462.6 3088.1 3397.2 8992.8 5908.7 5307.0 True False 3430.1224910289015 5113.133167769226 3046.019973904266 5950.104214546439 4485.919807349988 3829.010033712142 3649.16779698614 3878.763503488666 6955.9451585506995 4573.920566229628 3989.1254342512157 0.8598682963381815 1.2817679594296822 0.7635808961409667 1.4915811278978526 1.1245371651724019 0.959862029114377 0.9147789050837686 0.9723343042023783 1.7437268577282465 1.1465973285666267 1.0 11.961856772972359 RRS(ph)LEPAENVHGAGGGAFPASQTPSKPASADGHR ddPTM_A549_PD325901_60min_R1 2 RRSLEPAENVHGAGGGAFPASQTPSKPASADGHR 34 3 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 RRS(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR;RRS(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR 77.539 3.247e-06 54819000.0 2876.1 3056.3 2848.1000000000004 3207.0 3367.3999999999996 2768.8 3113.8999999999996 3111.1 4235.9 3577.4 3967.8999999999996 True False 3168.0795547270864 3313.865127085783 3041.3891930166083 3405.089106374554 3130.8854408993425 2746.2518107927153 3232.401168491461 3049.0466698892646 4057.879853739042 3351.522353477096 3479.873454590491 0.9104007936115894 0.9522947228768571 0.873994193382103 0.9785094632917514 0.8997124412007629 0.7891815166927938 0.9288846880990526 0.876194697789111 1.1660998328505514 0.9631161584499345 1.0 11.76481912816304 -8.748669305459766 24.99715953490098 1.0784360335155547 0.901669800655612 0.4432195661649676 0.06775109894375712 122.2799152720976 239360.34734168556 0.012337858120149474 0.013944761322445614 1.7837364807446937e-09 8.748669305459766 -0.17676623285994275 RRS(ph)LGEQDQMTLRPPEK ddPTM_A549_PD325901_60min_R1 1 RRSLGEQDQMTLRPPEK 17 3 P48681 P48681 NES Nestin 1 RRS(0.999)LGEQDQMT(0.001)LRPPEK 57.496 0.0022651 4599600.0 1765.2 1521.7 1272.9 1684.3 1627.4 1757.8 1367.6 1661.8 2132.2 1628.0 2105.8 True False 1944.401804528441 1649.9389994066141 1359.2866485695165 1788.3353856771628 1513.0970382252158 1743.4850595967323 1419.6447663794343 1628.654095343119 2042.5910489252324 1525.2078021637822 1846.7999497660373 1.0528491755562202 0.8934042908197162 0.7360226800643558 0.9683427736196976 0.8193074937092689 0.9440573462315756 0.7687052225441541 0.881879001323043 1.106016409186062 0.8258651958253539 1.0 10.850811882919915 -8.748551053413802 24.613689503993577 1.0500633005214048 0.8774514232204279 0.023401710612028448 0.11071933411654519 124.52833119998925 237819.70938182776 0.014722514511865608 0.016639494962362285 1.784222232271251e-09 8.748551053413802 -0.17261187730097693 RRS(ph)LQHQEQLEDSK ddPTM_A549_MK2206_60min_R1 2 RRSLQHQEQLEDSK 14 2 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L427 I3L419 FAM64A Protein FAM64A 1 RRS(1)LQHQEQLEDSK;RRS(1)LQHQEQLEDSK 104.73 4.6801e-06 33127000.0 3425.9 3220.6000000000004 2960.2 2474.3 4471.3 3597.2000000000003 3471.6000000000004 3239.0 4639.6 4614.7 4446.6 True False 4004.108164786671 3384.5147837051863 3380.000872193804 3080.5036110755486 3813.5776930952943 3977.8533163718944 4102.344782881733 3698.138169021482 3588.73800791876 3572.2360649516604 3342.3865000831843 1.1979787988872674 1.012604252566528 1.0112537470186895 0.9216479335944189 1.1409744782658688 1.190123678477308 1.2273699593926781 1.1064364246712473 1.073705272513949 1.068768098741051 1.0 11.706662855138585 -4.322018653686705 16.300842417760478 1.06415107643904 1.0668300333315834 0.0 0.0944359107608628 0.0 0.0 0.013164726391859827 0.0 4.764105237236192e-05 4.322018653686705 0.0026789568925433827 RRS(ph)LQHQEQLEDSK ddPTM_A549_PD325901_60min_R1 2 RRSLQHQEQLEDSK 14 2 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L427 I3L419 FAM64A Protein FAM64A 1 RRS(1)LQHQEQLEDSK;RRS(1)LQHQEQLEDSK 92.47399999999999 1.2572000000000001e-05 32969000.0 6700.700000000001 5966.4 5871.6 6069.6 7451.9 6109.799999999999 5977.6 6744.0 6474.299999999999 7123.5 7627.6 True False 7380.950131205376 6469.20946708262 6270.082084799097 6444.505406938258 6928.504251659383 6060.043814497734 6205.0808390682305 6609.48562943435 6202.207685984722 6673.720994295889 6689.453555340212 1.1033711603114638 0.967075922355157 0.9373085608455523 0.9633829360835593 1.0357354594574226 0.9059101411444859 0.9275915869263633 0.9880456714073419 0.9271620820258898 0.9976481545294886 1.0 12.707672650207567 -5.262438801492125 6.150760955221889 0.9627296627859229 1.1067796561344585 0.5374507992773268 0.03687187243032857 0.074839179568171 14.544006615760567 0.005174854619363911 0.044910159856053546 5.4646354924297216e-06 5.262438801492125 0.14404999334853563 RRS(ph)LS(ph)PKPR ddPTM_A549_PD325901_60min_R1 2 RRSLSPKPR 9 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 RRS(1)LS(1)PKPR;RRS(1)LS(1)PKPR 62.408 0.0024131 66511000.0 4485.7 4434.2 5435.200000000001 4759.6 5273.200000000001 4665.200000000001 3931.3999999999996 4169.6 5452.4 5127.6 5195.4 True False 4941.084961802195 4807.885595826254 5804.065356512716 5053.589682164117 4902.828623552422 4627.208157942133 4081.0115783446263 4086.43405701208 5223.254589231746 4803.842460918308 4556.3987363541055 1.084427691189271 1.055194216754037 1.273827356285538 1.1091192791893032 1.0760315124385973 1.0155406551720465 0.8956660324267691 0.8968561123519937 1.14635590330517 1.05430686357406 1.0 12.153678289344043 -6.837416041782189 3.0947941952457816 1.038921277173293 1.1368557206045773 0.27796794496638 0.08705103904892629 0.36656199007517004 7.086492739190973 0.014949171627874586 0.03063254739093154 1.4540654597406395e-07 6.837416041782189 0.09793444343128432 RRS(ph)PEQSR ddPTM_A549_MK2206_60min_R1 3 RRSPEQSR 8 2 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 RRS(0.971)PEQS(0.029)R;RRS(0.885)PEQS(0.115)R;RRS(0.999)PEQS(0.001)R 55.806000000000004 0.011926 120544500.0 9291.7 6781.099999999999 4498.38 2889.27 2588.4900000000002 1615.7199999999998 1828.1 2545.36 2886.5200000000004 11187.900000000001 12030.2 True False 10859.911799745556 7126.2290255800835 5136.31792563312 3597.141279704258 2207.72654995197 1786.6944179718644 2160.2421066903157 2906.172574838076 2232.7278288252564 8660.54561966599 9042.769323370829 1.2009497767103674 0.788058256353229 0.5680027591059328 0.3977919983436412 0.24414274775827263 0.19758266014308182 0.23889165248384914 0.3213808149818817 0.24690752898615062 0.9577315654047495 1.0 13.14254894637977 -5.38226606875758 1.9505712046353665 0.5111878810450768 1.3114292615247627 0.3966726448260611 0.27010687098698866 0.6234411968679543 3.0014398935338926 0.04828161539893113 0.8144970926612849 4.146999005761687e-06 5.38226606875758 0.8002413804796858 RRS(ph)PEQSR ddPTM_A549_PD325901_60min_R1 2 RRSPEQSR 8 2 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 RRS(0.992)PEQS(0.008)R;RRS(1)PEQSR 86.463 0.00091502 408770000.0 9861.2 8736.7 5921.700000000001 6448.1 7088.2 4861.3 4220.6 4983.799999999999 6268.299999999999 9335.7 10676.5 True False 10862.301764568248 9472.972370451324 6323.582172074877 6846.384492302382 6590.349284962499 4821.711184558879 4381.217242600939 4884.394199284537 6004.865149600426 8746.242308759474 9363.358183909722 1.160086109194707 1.01170671722566 0.6753540821434677 0.7311889984159119 0.7038446202226413 0.5149553279767352 0.4679108880112859 0.5216498294039448 0.6413153306384634 0.9340924630854431 1.0 13.192810332244802 -5.61449643416304 3.924105294772019 0.738974307666882 1.1327763368118278 0.45346657510385346 0.163607084829993 0.1956932192753021 5.509022468382561 0.028807714508151384 0.1329714955032098 2.429425389083168e-06 5.61449643416304 0.3938020291449458 RRS(ph)PGLCSDSLEK ddPTM_A549_MK2206_60min_R1 2 RRSPGLCSDSLEK 13 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RRS(0.998)PGLCS(0.002)DSLEK;RRS(0.99)PGLCS(0.01)DSLEK 85.63600000000001 5.8475e-05 26864000.0 5654.9 6573.299999999999 5451.9 5036.4 7174.6 6420.1 6464.0 5029.8 8665.8 8829.3 8560.7 True False 6609.308870968838 6907.852893165651 6225.061399605901 6270.318226092584 6119.2258441351505 7099.470720682531 7638.425128628745 5742.789553116474 6703.010136438996 6834.7549977848375 6434.841926699526 1.0271128562685297 1.0735077833852456 0.9673992726653935 0.9744323632995089 0.9509520068776177 1.1032859550481449 1.1870416112220716 0.8924523117325416 1.0416744051826328 1.0621480800368983 1.0 12.651688993423878 -5.717466905430231 24.999912089401302 1.0180831038219977 1.0503102460809277 0.022430921501569112 0.07655773618672633 486.4154083376906 276537.52579134743 0.009970354050775196 0.038614611615759305 1.9166071085030007e-06 5.717466905430231 0.032227142258929975 RRS(ph)PGLCSDSLEK ddPTM_A549_PD325901_60min_R1 4 RRSPGLCSDSLEK 13 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RRS(0.998)PGLCS(0.002)DSLEK;RRS(0.991)PGLCS(0.008)DS(0.001)LEK;RRS(0.988)PGLCS(0.011)DS(0.001)LEK;RRS(0.996)PGLCS(0.002)DS(0.002)LEK 74.812 0.00036705 86847000.0 17857.5 19113.2 20954.7 19909.5 18542.4 19717.1 18624.399999999998 19456.1 15463.900000000001 19931.800000000003 21659.4 True False 19670.380254003303 20723.936441781225 22376.811952847547 21139.26459724483 17240.04579180733 19556.530474783678 19333.161733662735 19068.03282248482 14814.006060160813 18673.302746417736 18995.43111024909 1.035532183493853 1.0909958463959004 1.1780102185084924 1.1128604807415516 0.9075890771705291 1.0295386485980749 1.0177795713850064 1.0038220618323612 0.7798720636652375 0.9830417976848366 1.0 14.21336483456689 -7.439689701644447 0.8242457344373049 0.9033740103302336 1.101950074467354 0.31006862439123617 0.08332496553116829 0.4707806313377181 0.6362367612530586 0.019062870516256967 0.04253822886425976 3.633375625134582e-08 7.439689701644447 0.19857606413712048 RRS(ph)PPADAIPK ddPTM_A549_MK2206_60min_R1 8 RRSPPADAIPK 11 2 M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754;P18754-2 M0R1Q8 RCC1 Regulator of chromosome condensation 1 RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK 91.45700000000001 9.722100000000001e-05 1072456900.0 39279.99 39934.76 37705.13 36281.39 52198.92999999999 39499.939999999995 35912.560000000005 38764.0 55721.69999999999 55706.700000000004 57440.2 True False 45909.49200844706 41967.26870884879 43052.28440179069 45170.3321787335 44520.53654450443 43679.79743286189 42437.40729229386 44258.91570977116 43100.82391927033 43122.5177800166 43176.213071128084 1.0633052030944954 0.9719997592126087 0.9971297003483554 1.0461855953953239 1.031135742987967 1.0116634675881417 0.9828885924382222 1.0250763687139361 0.9982539193112292 0.9987563686740422 1.0 15.397949091573837 -8.789147470092763 24.35362346766604 0.9991754568142277 1.0143052058879325 0.08189152046022774 0.025040113506782636 330.6436050530155 290612.8940574709 0.004175133132328739 0.004445111173187112 1.6249968741575318e-09 8.789147470092763 0.01512974907370479 RRS(ph)PPADAIPK ddPTM_A549_PD325901_60min_R1 10 RRSPPADAIPK 11 2 M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754;P18754-2 M0R1Q8 RCC1 Regulator of chromosome condensation 1 RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK 95.06700000000001 9.383799999999999e-05 1589725000.0 61342.600000000006 61738.3 64215.6 61998.59999999999 73589.0 69081.2 67199.20000000001 71390.7 69943.7 71935.3 74761.5 True False 67570.05559396475 66941.20321158272 68573.65677577228 65828.11271296322 68420.36250826805 68518.6256109988 69756.5023288133 69966.75648357937 67004.20952476861 67393.29288144498 65566.30945219571 1.0305606058738133 1.0209695157600633 1.0458672655011827 1.0039929540484263 1.0435292619016971 1.0450279447397541 1.0639077128425636 1.0671144535684447 1.0219304713744986 1.0278646677617462 1.0 16.00066707134812 -9.325023764680179 1.797621797177664 1.0067162365498472 1.0392724400253486 0.20062987968880008 0.018607821052585134 0.24420285926911936 1.6222607489524397 0.004038259136402236 0.003541034746618262 4.731253687391208e-10 9.325023764680179 0.032556203475501366 RRS(ph)PPPR ddPTM_A549_MK2206_60min_R1 21 RRSPPPR 7 2 P84103;P84103-2 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR 85.86200000000001 0.0044031999999999995 17187716000.0 79261.81000000001 83970.21000000002 71293.74999999997 51581.75999999999 70567.68999999999 54345.24 51725.810000000005 56691.13 77478.47 110974.69999999998 110118.19999999998 True False 92639.26576279821 88243.9350232346 81404.27578608437 64219.29351559317 60187.276281453735 60096.01722534925 61123.72012727038 64727.271286804214 59929.72025269273 85905.43819472358 82772.81183228985 1.1191992118196887 1.0660980709708168 0.9834663579029025 0.7758500900719805 0.7271382347551778 0.7260357102174179 0.738451657908109 0.7819871024552287 0.7240266329736308 1.0378460788402466 1.0 16.33686934683973 -6.0101939364137955 2.9110372546294263 0.8262104867245618 1.092737188577425 0.5277654385935371 0.10437412415735 0.18834205750454927 3.2032755092089538 0.01723576434195989 0.05939892029111593 9.768009281170291e-07 6.0101939364137955 0.2665267018528633 RRS(ph)PPPR ddPTM_A549_PD325901_60min_R1 21 RRSPPPR 7 2 P84103;P84103-2 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR 66.692 0.0079062 28444294200.0 84394.25000000001 82742.05000000002 80317.48999999999 84701.82 94556.28 74439.65999999999 66958.83 71418.84000000001 91741.45 92497.35999999999 92742.86000000002 True False 92961.89213223693 89715.01293674974 85768.31785970273 89933.65904960962 87914.97309425731 73833.44808935064 69506.98491692767 69994.33520920397 87885.87589598616 86657.06090390174 81336.07616542808 1.1429355399830612 1.1030162403492378 1.0544929372454603 1.1057044215741987 1.0808853492692285 0.907757683554614 0.8545652580480841 0.8605570677744974 1.0805276088956708 1.065419737333424 1.0 16.311607773186683 -7.029635652655064 22.971815870986724 1.0004380318100141 1.0976591793519037 0.3934524447963096 0.07632409888898288 307.3094900423297 238208.28188358995 0.013310238699487865 0.02308758299556283 9.340375743882871e-08 7.029635652655064 0.0972211475418896 RRS(ph)PRPS(ph)PVPK ddPTM_A549_MK2206_60min_R1 2 RRSPRPSPVPK 11 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 RRS(1)PRPS(1)PVPK;RRS(1)PRPS(1)PVPK 60.55 0.0027699 58515000.0 3080.7 3397.3 2951.6000000000004 2787.9 3465.7 3042.7 3189.7 3703.0 3970.1 4065.3999999999996 4308.1 True False 3600.6468441163743 3570.208058958465 3370.181262876573 3470.935625153585 2955.9001209850294 3364.6764944192046 3769.2272018544377 4227.911589961887 3070.8786889469498 3147.0233164570764 3238.2798724887266 1.111901066583586 1.102501389484486 1.0407319304018265 1.0718454740868506 0.9127994606325738 1.0390320253058727 1.1639596792965459 1.3056041344297384 0.9483055232612976 0.9718194351245136 1.0 11.661011962459103 RRS(ph)PRPSPVPK ddPTM_A549_MK2206_60min_R1 10 RRSPRPSPVPK 11 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RRS(0.998)PRPS(0.002)PVPK;RRS(0.964)PRPS(0.036)PVPK;RRS(0.992)PRPS(0.008)PVPK;RRS(0.923)PRPS(0.077)PVPK;RRS(1)PRPSPVPK;RRS(0.966)PRPS(0.034)PVPK;RRS(0.998)PRPS(0.002)PVPK;RRS(0.999)PRPS(0.001)PVPK;RRS(0.978)PRPS(0.022)PVPK;RRS(0.926)PRPS(0.074)PVPK 100.4 7.8943e-05 1140327100.0 13072.220000000001 14649.53 13204.619999999999 12304.23 17182.04 15129.140000000003 14327.420000000002 13612.580000000002 20088.100000000002 20659.390000000003 19208.18 True False 15278.491150905627 15395.128503798249 15077.233672382861 15318.766902357875 14654.584676910756 16730.09555288965 16930.526756871608 15542.204901777857 15538.177424103975 15992.419450430505 14438.258787200977 1.0581948541086885 1.0662732072267262 1.0442556747734923 1.0609843699392227 1.0149828239608465 1.1587335979682194 1.172615549174111 1.076459781670868 1.0761808368387218 1.1076418345269747 1.0 13.817609147360644 -10.366067013331582 0.870784113003518 1.0029227514443437 1.081233489540241 0.0 0.053806677397789535 0.5711172247588411 0.8218128356542412 0.02591444277408911 0.009059544264337636 4.3046018368246525e-11 10.366067013331582 0.07831073809589717 RRS(ph)PRPSPVPK ddPTM_A549_PD325901_60min_R1 4 RRSPRPSPVPK 11 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RRS(0.999)PRPS(0.001)PVPK;RRS(0.968)PRPS(0.032)PVPK;RRS(0.984)PRPS(0.016)PVPK;RRS(0.97)PRPS(0.03)PVPK 87.824 9.0285e-05 1377795000.0 10934.82 10044.05 10218.05 11151.91 10552.29 11037.810000000001 10827.38 11410.09 10724.32 11647.990000000002 11987.32 True False 12044.91487661097 10890.497343096536 10911.508319126202 11840.738152874786 9811.133553824237 10947.921734934238 11239.421870869675 11182.50680390755 10273.614125227396 10912.533923541594 10512.955633882333 1.1457210794071333 1.035912042470475 1.037910621819745 1.1262996406750854 0.9332421723728972 1.0413742924634863 1.0691019977908025 1.063688195151068 0.9772336613041949 1.038008178059028 1.0 13.359880708115258 -2.0000000000037774 0.22504778402560546 0.9875122327096678 1.654288173032405 0.18742715015319977 0.05222530953964431 39.122468242013746 0.45840013576985794 0.029633878441902052 9.682799672602304 0.009999999999913021 2.0000000000037774 0.6667759403227372 RRS(ph)PS(ph)LSSK ddPTM_A549_MK2206_60min_R1 2 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(0.993)LS(0.006)S(0.001)K;RRS(1)PS(0.998)LS(0.002)SK 62.14 0.006051300000000001 115576000.0 10716.7 9229.3 10053.5 9168.8 12248.6 9684.5 9118.0 9267.0 14187.599999999999 14708.5 16483.9 True False 12525.416961840472 9699.031948472415 11479.237473346533 11415.156411603073 10446.847165622308 10709.30736194918 10774.622574696292 10580.625628997243 10974.131252941674 11385.839634503098 12390.492697503985 1.0108893381103132 0.7827801674445316 0.926455287420409 0.9212834945540632 0.8431341207058525 0.864316506486181 0.8695879040279646 0.8539309846111823 0.8856896590683895 0.9189174242277491 1.0 13.59694593572151 -10.461613002406361 0.7796618139919759 1.0008244876980037 0.8805116870046271 0.14467692228965257 0.05932247777161942 0.4897795642964409 0.5334982754358129 0.034155272045965836 0.009740479103623386 3.4545143222976377e-11 10.461613002406361 -0.12031280069337658 RRS(ph)PS(ph)LSSK ddPTM_A549_PD325901_60min_R1 2 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(0.999)PS(0.924)LS(0.06)S(0.017)K;RRS(1)PS(0.991)LS(0.007)S(0.002)K 62.891000000000005 0.00577 526000000.0 12466.4 11315.7 12226.1 11400.0 12707.4 11217.5 11064.3 12890.5 13123.6 13830.5 13720.5 True False 13731.979750721364 12269.31375145261 13055.836667511798 12104.152108721513 11814.876062150119 11126.148399150268 11485.35799111727 12633.388865098377 12572.060730548348 12957.239869672105 12032.96548141557 1.1411966378470755 1.019641730910146 1.0850057442345373 1.0059159670503408 0.9818756714957522 0.9246389359575706 0.9544910611483048 1.0498982054432167 1.0448015287640764 1.076811854042467 1.0 13.554704612928335 RRS(ph)PS(ph)PAPPPR ddPTM_A549_MK2206_60min_R1 3 RRSPSPAPPPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR 99.991 0.00022483 193029500.0 14259.72 12778.02 11116.5 10149.18 14683.039999999999 11760.77 11330.689999999999 12285.91 17060.2 16994.8 19308.4 True False 16666.412119318058 13428.36663866377 12692.986857557744 12635.729555613998 12523.184266505466 13005.286875232705 13389.32970617301 14027.47536652138 13196.091939541253 13155.662876598799 14513.591395269685 1.148331358201942 0.9252270008814212 0.874558647261813 0.8706135656907273 0.8628590901757826 0.8960764101069725 0.9225373197799204 0.9665061516816064 0.9092230572125769 0.906437457022976 1.0 13.825116938722296 -10.843074117574231 0.8258448310793255 1.0058192669246375 0.9235485238090051 0.0 0.0800849257024545 1.3340046036126725 1.417324829015019 0.07373349025981485 0.013623062455706464 1.4352444707285448e-11 10.843074117574231 -0.08227074311563243 RRS(ph)PS(ph)PAPPPR ddPTM_A549_PD325901_60min_R1 3 RRSPSPAPPPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR 95.98100000000001 0.00023429 315093000.0 14107.420000000002 13611.69 14549.13 13813.96 16321.09 14166.36 14542.26 14941.53 15215.66 15402.22 16688.47 True False 15539.594893066294 14758.79488653021 15536.521452825997 14667.216935420582 15174.752943103846 14050.99386100169 15095.673662130013 14643.50946274647 14576.198724082964 14429.721200640695 14635.893986927545 1.0617455214519806 1.0083972253223779 1.061535528113477 1.002140145898912 1.0368176318206184 0.9600365972554683 1.0314145262061294 1.0005203287087026 0.9959213107926376 0.9859132085494061 1.0 13.837223250415077 -6.6552991366806955 1.3922542200494032 0.9989910675445253 1.0402301644666427 0.3728614188326166 0.023796433783394914 0.3203170897828449 1.227197223897818 0.0031222622294217843 0.009060699085964586 2.2115708821324322e-07 6.6552991366806955 0.04123909692211747 RRS(ph)PS(ph)PKPTK ddPTM_A549_MK2206_60min_R1 4 RRSPSPKPTK 10 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RRS(1)PS(0.998)PKPT(0.002)K;RRS(1)PS(1)PKPT(0.001)K;RRS(0.999)PS(0.888)PKPT(0.113)K;RRS(0.999)PS(0.95)PKPT(0.051)K 64.65 0.0019951 134451000.0 14359.6 14167.8 10870.3 9619.58 11651.5 8852.8 8848.8 9522.099999999999 12083.5 19727.3 21546.4 True False 16783.149421486512 14888.88050443343 12411.871995476087 11976.37753183936 9937.579784648715 9789.597419986954 10456.512419277542 10871.886835208239 9346.606543384418 15270.889228795118 16195.834229611923 1.0362633491765902 0.9193030932121482 0.7663620051619592 0.7394727163817317 0.6135886329633564 0.6044515695331075 0.6456297508997223 0.6712767419742074 0.5770994201888899 0.942889943938444 1.0 13.983335161231611 -5.591916413583872 2.2698615921151415 0.7452747426013027 1.0379540011106878 0.3638460622845636 0.12973264689293418 0.41399499693359837 3.7090543174819843 0.024234114077566482 0.1821950401426582 2.559078372109649e-06 5.591916413583872 0.29267925850938514 RRS(ph)PS(ph)PKPTK ddPTM_A549_PD325901_60min_R1 2 RRSPSPKPTK 10 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RRS(0.997)PS(0.501)PKPT(0.501)K;RRS(1)PS(0.986)PKPT(0.014)K 78.814 0.00043756 318460000.0 19805.4 17437.0 20569.6 18836.3 19718.0 16631.2 15197.6 17567.9 20569.1 19350.1 22140.0 True False 21816.02962803512 18906.477185156815 21965.57675105312 19999.775470658864 18333.075703407154 16495.761021256785 15775.95298444582 17217.49445274906 19704.652257972044 18128.331383691286 19416.920357023482 1.12355766140555 0.9737114247532035 1.13125955852766 1.0300178969125013 0.9441804038082547 0.8495559912666554 0.8124848170755022 0.8867263261200509 1.0148186167351962 0.9336357697493419 1.0 14.245026778145188 -6.580924118799014 5.186853804224992 0.9674498425965623 1.0683079523328505 0.3723194392078899 0.0771348431553271 0.24299433297822748 13.429430049290174 0.012880755151712059 0.027486366337742808 2.624677094575446e-07 6.580924118799014 0.10085810973628817 RRS(ph)PS(ph)PPPTR ddPTM_A549_MK2206_60min_R1 4 RRSPSPPPTR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(0.999)PPPT(0.001)R;RRS(1)PS(0.999)PPPT(0.001)R;RRS(0.998)PS(0.998)PPPT(0.004)R;RRS(0.999)PS(0.995)PPPT(0.006)R 70.628 0.0024999 266573000.0 9824.979999999998 9354.900000000001 8706.67 8719.31 10375.9 7449.490000000001 8004.540000000001 8838.050000000001 12386.68 14198.31 14394.169999999998 True False 11483.196426301321 9831.02445199144 9941.406727215599 10855.541341424694 8849.618854871616 8237.790087228752 9458.861305555985 10090.87065289297 9581.116757463387 10990.901909845448 10819.700330117923 1.0613229642170845 0.9086226191150243 0.9188245906906045 1.003312569684301 0.8179171866930223 0.7613695237286641 0.8742258118948193 0.9326386447879551 0.8855251499704857 1.015823135068812 1.0 13.40137292139072 -5.2584058923419015 23.725688057901245 0.9202886528720313 1.061323068289185 0.24100688947515714 0.07491204778112695 175.29021598390324 1370836.2549617374 0.010907639143293348 0.10547426883513508 5.5156170783113664e-06 5.2584058923419015 0.14103441541715367 RRS(ph)PS(ph)PPPTR ddPTM_A549_PD325901_60min_R1 4 RRSPSPPPTR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(1)PPPTR;RRS(1)PS(0.999)PPPT(0.001)R;RRS(1)PS(1)PPPTR;RRS(1)PS(1)PPPTR 84.169 0.0002923 439429000.0 11851.07 11025.78 11546.77 11603.169999999998 13024.83 10732.15 10915.79 11695.970000000001 11792.69 12735.530000000002 13283.36 True False 13054.181902103383 11954.961175578283 12330.40324856865 12319.871458188969 12110.010874024176 10644.750928632986 11331.19636179949 11462.684703039035 11297.084249484142 11931.406462340861 11649.590930156794 1.1205699822738484 1.0262129586568565 1.0584408776663108 1.0575368295806036 1.0395224129866667 0.9137446106435702 0.9726690344522665 0.9839559836703001 0.9697408533238594 1.0241910238628675 1.0 13.50799167576843 -7.0311864517379545 14.536323441072096 0.9795254151723861 1.0606272770025647 0.6219265486362275 0.03260719719712661 2.0650379950252833 962.6042793388698 0.004331650943122698 0.0075385110058638185 9.30708217107725e-08 7.0311864517379545 0.08110186183017853 RRS(ph)PS(ph)PPPTRR ddPTM_A549_PD325901_60min_R1 1 RRSPSPPPTRR 11 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(1)PPPTRR 56.568999999999996 0.004998300000000001 17979000.0 1239.6 953.25 1468.3 1253.8 1247.1 1231.3 856.63 1210.5 1296.6 887.63 1434.6 True False 1365.4432794547104 1033.5837229311658 1567.9476676051704 1331.2443784135996 1159.5079982614395 1221.272701036214 889.2295234159221 1186.3556278811213 1242.1084110479576 831.5848903161169 1258.1532946786772 1.08527576506759 0.8215085771365684 1.2462294334376895 1.0580939413695127 0.9215951690191846 0.9706867249019268 0.7067735920391359 0.9429340867275697 0.9872472744787293 0.6609567322466039 1.0 10.297091997021697 -4.944807673951593 20.36627804651439 0.9776819997823396 2.5169982033860236 0.0008351765663414668 0.1600204175699296 421.0526850364387 287440.62791553646 0.01658314027383449 24030.053567138577 1.1355135632234169e-05 4.944807673951593 1.539316203603684 RRS(ph)PS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RRSPSPR 7 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088;Q9Y2W1;A0A3B3ITZ9;Q5VUA4;Q5VUA4-2;Q8NAV1;Q8NAV1-2 A9Z1X7;Q9Y2W1;REV__M0R088;Q5VUA4;Q8NAV1 SRRM1;THRAP3;ZNF318;PRPF38A Serine/arginine repetitive matrix protein 1;Thyroid hormone receptor-associated protein 3;Zinc finger protein 318;Pre-mRNA-splicing factor 38A 2 RRS(1)PS(1)PR 45.137 0.060998000000000004 6082600.0 1196.8 790.66 324.99 377.74 231.93 190.24 164.22 238.52 260.93 1217.0 1175.0 True False 1398.790581049267 830.9012168180906 371.07846883800545 470.28631695739324 197.8134042358132 210.3710705289083 194.05664830188917 272.3309404368645 201.82977161958823 942.0788547567925 883.2150716497425 1.5837485409261527 0.9407688381789774 0.4201450821540831 0.5324708919187184 0.22396968822816948 0.23818781775990272 0.21971618751864597 0.30834045882865446 0.22851712804514737 1.066647167826404 1.0 9.786620981013108 -5.397792066502246 2.3957345985525023 0.5075873543183366 1.6825064156268676 0.5657639186628787 0.29038978260725656 0.27850338489056126 2.334521017011744 0.0476794724224084 0.5908831891801064 4.001362829849577e-06 5.397792066502246 1.1749190613085312 RRS(ph)PS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RRSPSPR 7 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088;Q9Y2W1;A0A3B3ITZ9;Q5VUA4;Q5VUA4-2;Q8NAV1;Q8NAV1-2 A9Z1X7;Q9Y2W1;REV__M0R088;Q5VUA4;Q8NAV1 SRRM1;THRAP3;ZNF318;PRPF38A Serine/arginine repetitive matrix protein 1;Thyroid hormone receptor-associated protein 3;Zinc finger protein 318;Pre-mRNA-splicing factor 38A 2 RRS(1)PS(1)PR 61.78 0.022977 21808000.0 1892.3 1783.3 1410.5 1255.5 1683.5 1229.3 781.68 1119.5 1752.8 2142.1 2348.4 True False 2084.404902962368 1933.5849494918953 1506.2250120255344 1333.0493835526186 1565.2567677597087 1219.2889883731166 811.4272601517089 1097.1706942692401 1679.135911526192 2006.8474404269277 2059.5616877341454 1.0120623797656452 0.9388332289377332 0.7313327981365919 0.6472490683292865 0.7599950888005433 0.5920138229579003 0.39398055663213055 0.5327204816459309 0.8152879913849612 0.9744051136602702 1.0 11.008121622936873 -9.512002797695821 1.4040372407989268 0.9536913063878687 0.70089106065187 0.283196950273256 0.16727496576878798 0.36703057762574437 1.4808729150113606 0.044952950584066606 0.035279963547527694 3.076076998795898e-10 9.512002797695821 -0.2528002457359987 RRS(ph)PS(ph)PTPTPGPSR ddPTM_A549_MK2206_60min_R1 1 RRSPSPTPTPGPSR 14 2 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 2 RRS(0.989)PS(0.843)PT(0.147)PT(0.022)PGPSR 55.589 0.012986000000000001 61064000.0 1452.3 1345.4 1140.9 1235.1 1623.5 1304.7 1141.1 1298.9 1900.2 2092.5 2057.4 True False 1697.4127346740056 1413.8751133319738 1302.696775584727 1537.6995554457458 1384.685300637446 1442.7624880102321 1348.423099362354 1483.0230527144201 1469.807733995868 1619.8027966956352 1546.490798648663 1.0975899346812923 0.9142473492680526 0.8423566287772515 0.9943153601621173 0.8953724793237671 0.9329266551543213 0.8719244243422707 0.9589601528895603 0.9504147941133556 1.0474053890983592 1.0 10.594782534330173 -9.91353289300561 0.7534602491871827 0.9959853890896658 0.9334078123605963 0.1665836668042534 0.06615942214023994 0.92140291718731 1.0727019080731852 0.027705739473040197 0.01296513790557428 1.220301392904841e-10 9.91353289300561 -0.0625775767290695 RRS(ph)PS(ph)PTPTPGPSR ddPTM_A549_PD325901_60min_R1 4 RRSPSPTPTPGPSR 14 2 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 2 RRS(0.947)PS(0.683)PT(0.367)PT(0.003)PGPSR;RRS(0.936)PS(0.892)PT(0.167)PT(0.004)PGPS(0.001)R;RRS(1)PS(0.949)PT(0.05)PT(0.001)PGPSR;RRS(0.986)PS(0.849)PT(0.135)PT(0.025)PGPS(0.005)R 66.215 0.0052475 254922000.0 6579.0199999999995 6248.86 6138.2300000000005 6679.61 6445.86 6257.94 6098.54 6459.23 6259.66 6805.6900000000005 7866.13 True False 7246.917267181455 6775.473362576074 6554.8071999755375 7092.194339205027 5993.1250306098 6206.977411453391 6330.623276949134 6330.395590482089 5996.588258754019 6375.97757193368 6898.645877506471 1.0504840219166123 0.9821454069222468 0.950158526233091 1.028056007676758 0.8687393347947912 0.8997385170460315 0.9176617251206625 0.9176287206048359 0.8692413504375293 0.9242361015692966 1.0 12.752097490389632 -5.080142615159999 0.7948626180361276 0.9298645041046839 1.1426647454171475 0.4203477127648576 0.04473230357513331 3.1672920345121973 1.1822394151064672 0.008934601897343339 0.6347563996185871 8.314906784118944e-06 5.080142615159999 0.21280024131246356 RRS(ph)PS(ph)PYYSR ddPTM_A549_MK2206_60min_R1 8 RRSPSPYYSR 10 2 P62995;H7BXF3;P62995-3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RRS(0.974)PS(0.823)PY(0.199)Y(0.004)SR;RRS(1)PS(0.996)PY(0.002)Y(0.001)SR;RRS(0.998)PS(0.826)PY(0.062)Y(0.021)S(0.093)R;RRS(1)PS(0.995)PY(0.002)Y(0.001)S(0.002)R;RRS(1)PS(0.991)PY(0.01)YSR;RRS(0.998)PS(0.975)PY(0.016)Y(0.004)S(0.007)R;RRS(0.995)PS(0.978)PY(0.025)Y(0.001)S(0.001)R;RRS(0.988)PS(0.858)PY(0.102)Y(0.017)S(0.035)R 79.492 0.00039733 3938651000.0 37050.73 34907.08 31494.76 25035.27 45949.200000000004 36378.64 35178.520000000004 34041.15 52595.159999999996 49181.57 53748.69 True False 43303.98742062124 36683.701271806385 35961.19055115687 31168.91227387599 39190.13354853718 40228.20353861314 41570.001725861504 38866.587259149645 40682.4402372119 38071.41917891618 40401.40688462111 1.0718435510003244 0.9079807883069073 0.8900974823440018 0.7714808635968692 0.970019030784173 0.9957129377572764 1.0289246076152172 0.9620107381444755 1.0069560288678405 0.9423290453137203 1.0 15.302117911886066 -6.986730851968405 24.94152693063017 1.0008364216420609 0.9039866349894506 0.21476449834486133 0.06857409912788566 203.57810364023027 382655.75369355414 0.009172113877800427 0.017326614316695133 1.0310248859798032e-07 6.986730851968405 -0.09684978665261024 RRS(ph)PS(ph)PYYSR ddPTM_A549_PD325901_60min_R1 7 RRSPSPYYSR 10 2 P62995;H7BXF3;P62995-3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RRS(0.988)PS(0.686)PY(0.184)Y(0.051)S(0.092)R;RRS(0.999)PS(0.984)PY(0.005)Y(0.002)S(0.01)R;RRS(0.996)PS(0.824)PY(0.101)Y(0.013)S(0.066)R;RRS(0.997)PS(0.957)PY(0.027)Y(0.008)S(0.011)R;RRS(0.959)PS(0.698)PY(0.318)Y(0.021)S(0.005)R;RRS(0.95)PS(0.988)PY(0.058)Y(0.001)S(0.003)R;RRS(0.998)PS(0.986)PY(0.01)Y(0.001)S(0.004)R 77.204 0.0011737 8692190000.0 42380.0 44435.9 44344.2 42402.5 47063.3 44146.899999999994 40582.40000000001 43895.399999999994 50572.8 48767.2 56405.1 True False 46682.386401492935 48180.6692408046 47353.664075336914 45021.60612193544 43757.73616757087 43787.382283258026 42126.78543954137 43019.87181172487 48447.40108764938 45688.03066933755 49467.63028138867 0.9436956275436619 0.9739837741718493 0.9572656665777842 0.9101225562218619 0.8845731222349243 0.8851724255675991 0.8516030624452781 0.8696570174680541 0.9793758223724103 0.9235944881420138 1.0 15.594197169218313 -8.878218433375482 6.4865993276792 0.9909544495019673 0.9098242960309781 0.24108001567398574 0.04091510500909901 0.1422763382259826 7.571722629660487 0.007121252885833033 0.007553029749478248 1.3236756099581515e-09 8.878218433375482 -0.08113015347098917 RRS(ph)PSLSSK ddPTM_A549_MK2206_60min_R1 8 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.99)PS(0.01)LSSK;RRS(1)PSLSSK;RRS(1)PSLSSK;RRS(0.862)PS(0.138)LSSK;RRS(0.995)PS(0.005)LSSK;RRS(0.5)PS(0.5)LSSK;RRS(0.975)PS(0.024)LS(0.001)SK;RRS(0.983)PS(0.016)LS(0.001)S(0.001)K 102.4 0.0002278 1226445400.0 22072.149999999998 21715.640000000003 18206.88 16511.129999999997 24696.8 18859.22 16500.78 18404.87 26910.899999999994 30448.250000000004 29434.979999999996 True False 25797.389307742797 22820.87332100219 20788.889358802764 20556.3575912128 21063.93343565312 20854.89014266295 19498.75813644409 21013.816685050468 20815.624117876734 23569.96917777197 22125.462101879766 1.1659593453440715 1.031430359100312 0.9395911942122354 0.9290815033176796 0.9520223052816394 0.9425742181850806 0.8812813963685525 0.9497571887217283 0.9407995196678062 1.0652870918239254 1.0 14.4334199665023 -5.366020135511865 2.4696531922450378 0.9562752027116614 1.1887330901994395 0.6651900355772136 0.04395519904478632 0.1554897532720625 1.3527674338420428 0.005114325117101956 0.06833614922452716 4.3050665013513865e-06 5.366020135511865 0.23245788748777807 RRS(ph)PSLSSK ddPTM_A549_PD325901_60min_R1 8 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.953)PS(0.047)LSSK;RRS(0.995)PS(0.005)LSSK;RRS(1)PSLSSK;RRS(0.5)PS(0.5)LSSK;RRS(0.998)PS(0.001)LSSK;RRS(0.994)PS(0.006)LSSK;RRS(0.976)PS(0.023)LS(0.001)SK;RRS(0.979)PS(0.02)LSSK 87.001 0.00036887 2088852100.0 27977.800000000003 28180.899999999998 30825.399999999998 27362.649999999998 32710.6 28705.500000000004 28721.300000000003 29036.300000000003 30495.8 33020.5 33923.6 True False 30818.085659832235 30555.803343877134 32917.397012188514 29052.778745413056 30413.12030144385 28471.731925278185 29814.304788398433 28457.148217963324 29214.167578001157 30935.57999468623 29751.21225941834 1.035859829546144 1.0270439764754153 1.1064220417360593 0.9765241998236835 1.0222481032454727 0.9569940100933162 1.0021206708630879 0.9565038214183911 0.9819488134891993 1.039809058028987 1.0 14.860660834021102 -6.2872933804806 24.90148440234556 0.9885020992616044 1.0535021626328303 0.4691809078023418 0.03030711415165198 351.25148132911926 338309.899648546 0.0034007776392916563 0.007905145466993896 5.160676305093531e-07 6.2872933804806 0.06500006337122588 RRS(ph)PSPAPPPR ddPTM_A549_MK2206_60min_R1 2 RRSPSPAPPPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.784)PS(0.216)PAPPPR;RRS(0.5)PS(0.5)PAPPPR 58.699 0.0022335999999999996 14835800.0 976.6700000000001 1137.12 939.55 452.78 1026.06 952.79 643.94 628.81 785.77 1288.16 1338.98 True False 1141.5080187110532 1194.994550967783 1072.7923179074683 563.7111203260665 875.1279332134626 1053.6136053891844 760.9355627056295 717.9457431498606 607.7943496168471 997.1637613340253 1006.4743120319763 1.1341650800868 1.187307551402084 1.065891404363418 0.5600849555593597 0.8694985284290686 1.0468360620769728 0.7560407191807734 0.7133274387305486 0.6038846122061157 0.9907493409552064 1.0 9.975094635881092 -6.05835251973153 8.099496907437016 0.8052364542580545 1.15269766072656 0.4660750149854551 0.15013011019381886 0.22167800934471552 28.671191125297927 0.024187792091554295 0.06469707892626345 8.742738332245484e-07 6.05835251973153 0.34746120646850553 RRS(ph)PSPAPPPR ddPTM_A549_PD325901_60min_R1 1 RRSPSPAPPPR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.937)PS(0.063)PAPPPR 49.298 0.0094063 10817000.0 1096.6 1520.2 1160.8 1155.3 1608.4 1390.1 1123.7 1232.9 1139.5 1261.0 1637.2 True False 1207.9260247257473 1648.312589142364 1239.5788684574557 1226.66025712333 1495.4315326787748 1378.7794864861855 1166.4630184122336 1208.3088423086604 1091.6107777179914 1181.3802447963935 1435.8347790658922 0.8412709054948404 1.1479820750787935 0.8633158121882837 0.8543185295465231 1.0415066931667822 0.9602633301466447 0.8123936231514721 0.8415375222313163 0.7602621092854138 0.8227828591566513 1.0 10.487674033031997 -7.729603184783467 24.464325793962605 0.8747283787267148 0.9560498360167378 0.18538805883729104 0.10124802096995754 293.1243348453469 225248.6152838023 0.017934096207698855 0.02659902220347475 1.8637893046912447e-08 7.729603184783467 0.08132145729002294 RRS(ph)PSPPPTR ddPTM_A549_MK2206_60min_R1 2 RRSPSPPPTR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.993)PS(0.007)PPPTR;RRS(0.969)PS(0.031)PPPTR 49.333 0.0096451 15010300.0 1490.03 1341.3 1246.51 1318.43 1478.77 995.8 1164.21 1034.85 1642.82 1931.94 2251.8 True False 1741.5106362640697 1409.56644084449 1423.2838616303968 1641.4454091865716 1261.2448919147732 1101.174895041457 1375.7318872216686 1181.5431565952085 1270.7238930444637 1495.5134122093984 1692.615913481607 1.028887074966635 0.8327739504381111 0.8408782230475367 0.9697683899297739 0.7451453586540315 0.650575766345247 0.8127844458178776 0.698057454845055 0.7507455666245407 0.8835515489944905 1.0 10.725038920281515 -5.259628555957703 23.351417917504776 0.8418840697685902 1.0288872130907303 0.2261311062032454 0.10399807218794933 95.89088830571217 1236274.6246341348 0.01752015908408439 0.1552277102452679 5.500110870622601e-06 5.259628555957703 0.18700314332214008 RRS(ph)PSPPPTR ddPTM_A549_PD325901_60min_R1 2 RRSPSPPPTR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.986)PS(0.014)PPPTR;RRS(0.999)PS(0.001)PPPTR 55.31399999999999 0.0057236000000000006 14373800.0 2757.9 2414.8 2280.6 2345.5 3038.0 2158.94 2596.1 2117.1800000000003 2673.1 2746.5 2952.2 True False 3037.8799777413255 2618.3036707413376 2435.3752303618826 2490.3762079830094 2824.621360531036 2141.358308434276 2694.8960061404305 2074.951184004422 2560.7589029556502 2573.085521279377 2589.0981155377026 1.1733352087008182 1.0112802041098274 0.9406268598886625 0.9618701558808286 1.0909672922705829 0.8270672693257743 1.0408628355827125 0.8014185215895139 0.9890544076286708 0.9938153775779177 1.0 11.33823392279218 -5.283330220821545 3.344330904483103 0.9751931763778077 1.195018518628209 0.3527139540860973 0.08117369047853847 0.23784796272194172 4.4160001153063915 0.010144801305282673 0.12950259285224755 5.207985653174352e-06 5.283330220821545 0.2198253422504013 RRS(ph)PSPTPTPGPSR ddPTM_A549_MK2206_60min_R1 1 RRSPSPTPTPGPSR 14 2 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 1 RRS(0.979)PS(0.018)PT(0.002)PT(0.001)PGPSR 41.202 0.031718 7762800.0 568.15 586.49 451.72 347.11 692.44 344.29 555.76 486.27 767.2 1022.7 881.26 True False 664.0398300661275 616.3398358986689 515.7806884627339 432.15196558236 590.5829932697216 380.72253927879444 656.7343981260377 555.2002616394185 593.4304249666509 791.6713597040024 662.4188204613209 1.0024471068072578 0.930438291999974 0.7786322980731957 0.6523847937795626 0.8915552744386527 0.5747459575705475 0.9914186883589381 0.8381408324913936 0.8958538112690922 1.195122081755871 1.0 9.371599852648936 -9.380542973643136 0.6878188563953154 0.9854457119658032 0.8197188828519628 0.28625493914395894 0.1396591646929033 0.6849794461094159 0.7116621734839934 0.04481255090894797 0.029855835480533537 4.163485211049427e-10 9.380542973643136 -0.1657268291138404 RRS(ph)PSPY(ph)YSR ddPTM_A549_MK2206_60min_R1 1 RRSPSPYYSR 10 2 P62995;H7BXF3;P62995-3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RRS(0.957)PS(0.314)PY(0.605)Y(0.075)S(0.05)R 41.56 0.039952 94764000.0 3951.0 3769.4 3949.3 2796.0 5748.4 4291.9 4073.9 3610.3 6114.1 5899.2 5844.3 True False 4617.832207324243 3961.246359590861 4509.370125179037 3481.0201255172083 4902.817974859437 4746.066009267352 4814.074896584258 4122.071081080045 4729.266112211417 4566.566622827666 4392.999015525605 1.051179886679701 0.9017180166877214 1.0264901287803974 0.7924017540670262 1.1160526004062477 1.080370378525911 1.0958515764675794 0.938327340049917 1.076546135225022 1.0395100492143623 1.0 12.10099046078375 -6.802473697335289 24.999963779519046 1.0420035394894482 0.9459685525007973 0.2993398581569241 0.07784689899847765 146.38151172804425 89181.82327441544 0.010628854948921445 0.020086795894700943 1.5758914623392021e-07 6.802473697335289 -0.09603498698865098 RRS(ph)PSPY(ph)YSR ddPTM_A549_PD325901_60min_R1 2 RRSPSPYYSR 10 2 P62995;H7BXF3;P62995-3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RRS(0.956)PS(0.427)PY(0.484)Y(0.129)S(0.004)R;RRS(0.842)PS(0.379)PY(0.775)Y(0.003)SR 63.76 0.0036821999999999996 80136000.0 6052.299999999999 6226.4 5595.4 5079.9 5474.2 4435.700000000001 3920.5 4319.5 5546.6 6386.9 7344.900000000001 True False 6666.725040532229 6751.120579552696 5975.1374918735755 5393.6738857100345 5089.711076964778 4399.577129851651 4069.6967728799186 4233.344183917801 5313.495690821076 5983.630044004827 6441.5238631572665 1.0349608543194284 1.048062651473852 0.9275968883774196 0.8373288681828098 0.7901408401319021 0.6830025353185962 0.6317909953197295 0.6571960725210848 0.8248817832084696 0.9289152956847068 1.0 12.653186309920436 -5.943303195672273 2.843223225927195 0.8467983800181597 1.0438251588472154 0.36305192795855445 0.1141986793756555 0.3199201337599764 5.170450339702182 0.020893158742151613 0.07782026108008468 1.1394540184128554e-06 5.943303195672273 0.19702677882905573 RRS(ph)PSPYYS(ph)R ddPTM_A549_PD325901_60min_R1 2 RRSPSPYYSR 10 2 P62995;H7BXF3;P62995-3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RRS(1)PS(0.002)PYY(0.001)S(0.997)R;RRS(0.996)PS(0.334)PY(0.014)Y(0.039)S(0.616)R 107.2 0.0013126 162960000.0 8118.5 9678.9 8394.2 8279.0 8272.2 8919.9 7694.200000000001 8709.7 8423.9 10092.0 10848.599999999999 True False 8942.684143476183 10494.5748711025 8963.880890425204 8790.375027026785 7691.18920954076 8847.259291783423 7987.006991427796 8535.97820087253 8069.87277790135 9454.7893976885 9514.290974941508 0.9399212371188974 1.103032784969772 0.9421491222030144 0.9239127802774422 0.8083828032795732 0.9298916035976935 0.8394747451453572 0.8971743899103325 0.848184357526543 0.9937460839268295 1.0 13.215880432485672 -5.960353974748494 10.008482353283473 0.9104187244548598 1.0220234463274327 0.30905192938721815 0.0662821274397453 0.41113864340377315 99.5036809324574 0.009915604387691446 0.030845879825557105 1.0955848680430074e-06 5.960353974748494 0.11160472187257287 RRS(ph)PSPYYSR ddPTM_A549_MK2206_60min_R1 8 RRSPSPYYSR 10 2 P62995;H7BXF3;P62995-3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 RRS(0.496)PS(0.496)PY(0.006)Y(0.001)S(0.001)R;RRS(0.498)PS(0.498)PY(0.003)YSR;RRS(0.5)PS(0.5)PYYSR;RRS(0.977)PS(0.023)PYYSR;RRS(0.5)PS(0.5)PY(0.001)YSR;RRS(0.994)PS(0.006)PYYSR;RRS(0.499)PS(0.499)PYY(0.001)SR;RRS(0.863)PS(0.136)PY(0.001)YSR 88.163 0.00023295 328923600.0 5369.16 5503.29 4560.28 3160.764 5404.169999999999 4553.030000000001 4041.37 4613.47 5699.03 6622.209999999999 6853.7300000000005 True False 6275.342944641113 5783.383954547884 5206.996276416444 3935.1513218920877 4609.223751860711 5034.828612543287 4775.6346166593985 5267.443500659325 4408.208804480829 5126.248161675412 5151.759687674882 1.2180969853182986 1.122603596667 1.010721887683098 0.7638460565826819 0.8946891996705244 0.9773026922409944 0.9269909518653735 1.022455203658122 0.8556705032315596 0.9950479976656318 1.0 12.330849582795183 -5.7538724685679155 2.7172683992238955 0.92745127461854 1.1959227876833163 0.6237906333482177 0.07225936760225876 0.13549906693012626 1.9564844761822064 0.010706076981136754 0.05118676760034815 1.7624935301328538e-06 5.7538724685679155 0.26847151306477623 RRS(ph)PSPYYSR ddPTM_A549_PD325901_60min_R1 6 RRSPSPYYSR 10 2 P62995;H7BXF3;P62995-3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 RRS(0.5)PS(0.5)PYYSR;RRS(0.879)PS(0.121)PYYSR;RRS(0.66)PS(0.34)PYYSR;RRS(0.912)PS(0.088)PYYSR;RRS(0.881)PS(0.118)PYYSR;RRS(0.889)PS(0.111)PYYSR 88.83 0.00014288 819294000.0 19687.799999999996 19165.63 18808.519999999997 17973.069999999996 19729.05 18117.31 15996.140000000001 18578.510000000002 18653.66 21716.83 23031.349999999995 True False 21686.490962607673 20780.784901884337 20084.979272018798 19083.22571409642 18343.349589527585 17969.768634134984 16604.881861123682 18207.94704349085 17869.711540050008 20345.625647582598 20198.639957756677 1.0736609498442806 1.028820997123824 0.9943728545102251 0.944777755037318 0.9081477578634385 0.8896524058905381 0.8220792041370627 0.9014442101830049 0.8846987508774167 1.0072770092507874 1.0 14.301970534295993 -5.923381065745639 1.5113736003247968 0.9251006489981976 1.0681726159548088 0.528190116774663 0.04973005995966708 0.35313422085540525 1.4029731709704036 0.008598192708825007 0.05176880575988572 1.192940915441268e-06 5.923381065745639 0.14307196695661129 RRS(ph)PSYSR ddPTM_A549_MK2206_60min_R1 1 RRSPSYSR 8 2 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 1 RRS(0.998)PS(0.001)YSR 47.302 0.012423 45539000.0 889.16 974.72 705.65 673.08 1124.2 758.84 1177.0 1014.5 1412.1 1442.9 1375.8 True False 1039.2284701251392 1024.3290846342659 805.721780779528 837.9846302157092 958.8316692187348 839.1399451227755 1390.8456646652276 1158.3084817759482 1092.261604660332 1116.9478878624284 1034.1508898516724 1.0049099027262791 0.990502541443623 0.7791143330110097 0.810311762470079 0.9271680550951896 0.8114289252733059 1.3449156001448836 1.1200575207570374 1.056191717648664 1.0800627827363098 1.0 10.014230984975333 RRS(ph)PSYSR ddPTM_A549_PD325901_60min_R1 2 RRSPSYSR 8 2 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 1 RRS(0.999)PS(0.001)YSR;RRS(0.997)PS(0.003)YS(0.001)R 56.403999999999996 0.0061888 135221000.0 3586.5 3310.1000000000004 3239.5 3639.2 3592.8999999999996 3352.6000000000004 2844.5 3435.7 3175.6000000000004 3763.9 3746.8999999999996 True False 3950.5988397582464 3589.0537437969606 3459.351950696009 3863.9851187771324 3340.547098832112 3325.297537150987 2952.749004070124 3367.172268245492 3042.140575446471 3526.2467116488074 3286.0550535560683 1.202231482848417 1.0922074296695048 1.0527370644482674 1.1758735187944116 1.0165828156826144 1.0119421260311667 0.8985695479674783 1.0246852877895765 0.9257728570780819 1.0730942282396672 1.0 11.682140935621707 -7.011494205845852 2.545767659103515 0.9662156204090834 1.1223881704089733 0.5222020684168296 0.060719927903584846 0.13023303639733913 1.6919159919450777 0.007640607138083153 0.014976814198208828 9.738807783044698e-08 7.011494205845852 0.15617254999988994 RRS(ph)PVPR ddPTM_A549_MK2206_60min_R1 1 RRSPVPR 7 2 Q8TDR2;A0A0C4DGC9 Q8TDR2 STK35 Serine/threonine-protein kinase 35 1 RRS(1)PVPR 48.794 0.018445 27145000.0 763.75 1264.9 739.69 736.46 1191.3 726.83 972.79 715.53 1074.1 1075.8 1375.1 True False 892.6523281052624 1329.2780071752745 844.5891646351713 916.892733060946 1016.0613481055668 803.742668169294 1149.5333510022826 816.9585687187227 830.8180649852438 832.7760328244506 1033.62471917069 0.8636135645260746 1.2860354270956258 0.8171139379414339 0.887065407836413 0.9830079808083394 0.777596213850383 1.1121380223226374 0.7903821895573421 0.8037908242479297 0.8056850976751149 1.0 10.013496762320624 -5.793771342654279 24.99991655595032 0.90200560072628 1.0748256806410679 0.21533002960255965 0.13612538393936896 186.555955181406 144249.73525764243 0.017471994101905218 0.054328283973590956 1.6077875351619344e-06 5.793771342654279 0.17282007991478787 RRS(ph)PVPR ddPTM_A549_PD325901_60min_R1 1 RRSPVPR 7 2 Q8TDR2;A0A0C4DGC9 Q8TDR2 STK35 Serine/threonine-protein kinase 35 1 RRS(1)PVPR 48.423 0.018741 25432000.0 926.37 987.08 931.09 1035.7 1164.4 831.92 843.13 852.17 739.7 942.15 1320.4 True False 1020.4144004424496 1070.2646957575607 994.2793664990107 1099.6728367546384 1082.6165609619277 825.1451193421968 875.2157735284391 835.1728008355678 708.6129813760411 882.6624882116754 1157.9991707052316 0.8811875053597908 0.9242361504505744 0.85861837525625 0.9496317998957876 0.9349027083522045 0.7125610624053179 0.7558000002672066 0.7212205517616566 0.6119287468439979 0.7622306738562915 1.0 10.177418504811449 -7.242917899744036 24.118176660487187 0.7929267236625304 0.9099008942413461 0.3629291953444328 0.09313927355890714 866.9697043272879 1128943.993392048 0.02136772491093033 0.03695843669394279 5.71586680820228e-08 7.242917899744036 0.11697417057881576 RRS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 RRSPVR 6 2 H3BMM9;H3BTC0;Q15287;H3BV80;H3BPG5;Q15287-2;Q15287-3 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 RRS(1)PVR;RRS(1)PVR 54.157 0.027594 1591710000.0 8566.9 6375.700000000001 3843.7 3154.6 5419.6 5068.8 4991.4 5476.9 6072.9 9724.8 9949.8 True False 10012.783279404222 6700.19589718349 4388.794457283737 3927.4771416153744 4622.38401930071 5605.17705160287 5898.27277027189 6253.267347302799 4697.397846428533 7527.960925833072 7478.990059489873 1.3387881518440172 0.8958690737503798 0.5868164581546573 0.525134692033975 0.6180492262368368 0.7494564114964458 0.7886456223842341 0.8361111991809924 0.6280791669816623 1.0065477913399632 1.0 12.868627750692374 -10.99835509575311 1.2637267441324218 1.0006002441702735 0.7478352744488692 0.13947662243868164 0.21061951234280962 0.7098729719550392 2.0098303297491116 0.15451326702498114 0.03489212428709136 1.0037947137618e-11 10.99835509575311 -0.2527649697214043 RRS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 RRSPVR 6 2 H3BMM9;H3BTC0;Q15287;H3BV80;H3BPG5;Q15287-2;Q15287-3 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 RRS(1)PVR 49.57 0.060398 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RRS(ph)QFFEQGSSDSVVPDLPVPTISAPSR ddPTM_A549_MK2206_60min_R1 2 RRSQFFEQGSSDSVVPDLPVPTISAPSR 28 2 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 RRS(1)QFFEQGSSDSVVPDLPVPTISAPSR;RRS(0.316)QFFEQGS(0.316)S(0.316)DS(0.053)VVPDLPVPTISAPSR 179.41 1.8961999999999997e-58 28054000.0 944.04 1121.38 929.49 1016.45 1432.58 1184.44 685.8199999999999 946.8199999999999 1489.97 1284.7 1240.47 True False 1103.3708724379594 1178.4534521987587 1061.3056586363828 1265.4802956301742 1221.849379727251 1309.7766546323596 810.4246166021288 1081.0346345146402 1152.4941739931699 994.4853777371006 932.4270637696641 1.1833320967510261 1.2638559067928021 1.1382184192999307 1.3571895806134426 1.3103967347188483 1.4046960942308209 0.8691560424315683 1.1593771529369576 1.2360153611734597 1.0665556764478115 1.0 9.86484706918749 -7.737544987560448 24.99996092695257 1.1021193063737318 1.2746693697732645 0.44990591299017546 0.11250984017428553 223.74194541464936 234093.7388227615 0.01942912969653178 0.028809551434804643 1.8300165293145842e-08 7.737544987560448 0.17255006339953272 RRS(ph)QFFEQGSSDSVVPDLPVPTISAPSR ddPTM_A549_PD325901_60min_R1 3 RRSQFFEQGSSDSVVPDLPVPTISAPSR 28 2 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 RRS(0.878)QFFEQGS(0.053)S(0.053)DS(0.015)VVPDLPVPTISAPSR;RRS(0.838)QFFEQGS(0.078)S(0.078)DS(0.006)VVPDLPVPTISAPSR;RRS(0.999)QFFEQGSSDSVVPDLPVPTISAPSR 108.86 2.0394000000000004e-15 34536300.0 3291.5299999999997 3659.29 4757.04 4260.23 4724.6 4930.12 4780.0 4549.32 5272.2 5093.700000000001 5347.799999999999 True False 3625.683702503684 3967.67121057937 5079.881340805352 4523.374731415673 4392.760394985163 4889.970737296074 4961.905515716366 4458.5802437275015 5050.627768569369 4772.082912703723 4690.054502497297 0.7730579038203348 0.8459755016635132 1.083117762938679 0.9644610161794765 0.9366118011307043 1.0426255675050957 1.0579632951118834 0.9506457209299928 1.0768803999783114 1.0174898628923712 1.0 12.195388972866638 -5.635835817060582 4.773982410638931 1.023858072983783 0.7899175472253825 0.7302262044418583 0.04839799681824906 0.07316019895038492 2.659430618634059 0.007044888368773547 0.02958233539210836 2.312939020384629e-06 5.635835817060582 -0.2339405257584004 RRS(ph)QS(ph)IEQESQEK ddPTM_A549_PD325901_60min_R1 1 RRSQSIEQESQEK 13 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 2 RRS(1)QS(1)IEQESQEK 71.697 0.0017444000000000003 93818000.0 1290.6 1152.4 1245.0 1090.8 1448.6 1173.0 1384.0 1405.7 1198.5 1175.1 1573.7 True False 1421.620761910495 1249.516792348152 1329.4931867931873 1158.1762386134578 1346.8553333987024 1163.447476906911 1436.6688773538604 1377.6622107496835 1148.1312128960183 1100.9039854561788 1380.1448765062273 1.0300518344923772 0.9053519044400945 0.9632997299230915 0.839170045354461 0.9758796748992064 0.8429893822829125 1.0409551213135833 0.9982011556911122 0.8318918053026861 0.7976727691393284 1.0 10.43060400213398 -5.253538073381086 23.520982489586874 0.9270638851061397 1.0300519507384422 0.13396821830836125 0.07868953177330391 688.4817924973551 2049387.5405467427 0.01035872725250245 0.14948104117907132 5.5777870110092985e-06 5.253538073381086 0.10298806563230256 RRS(ph)QSIEQES(ph)QEK ddPTM_A549_PD325901_60min_R1 1 RRSQSIEQESQEK 13 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 2 RRS(0.794)QS(0.491)IEQES(0.715)QEK 54.004 0.017190999999999998 7626100.0 2378.6 2231.6 2265.8 2037.7 2524.5 2347.7 2140.7 2131.7 2428.0 2121.7 2727.4 True False 2620.0737209672275 2419.664763800882 2419.5708133622516 2163.564101047528 2347.187829052205 2328.5811095774534 2222.1655099359878 2089.1815712136995 2325.95960359744 1987.735499908412 2391.947090413092 1.0953727745352166 1.0115879124161575 1.0115486346081295 0.9045200496779708 0.9812875203049926 0.9735086193630247 0.9290195083505033 0.8734229864812333 0.9724126478047406 0.8310114834375905 1.0 11.223969762307272 -5.293457781788207 1.5069092879418282 0.9691077176748443 1.1370248157539347 0.32813268193679535 0.057512548859708496 0.7956255965456094 1.7092997411192647 0.0062733315032533375 0.19440632813767172 5.087942776540302e-06 5.293457781788207 0.1679170980790904 RRS(ph)QVIEK ddPTM_A549_MK2206_60min_R1 2 RRSQVIEK 8 2 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 RRS(1)QVIEK;RRS(1)QVIEK 56.358999999999995 0.0038916 46713700.0 6153.39 6717.51 6522.259999999999 6142.65 7941.610000000001 6031.21 5801.37 6342.92 9530.8 8651.880000000001 8084.849999999999 True False 7191.931796058449 7059.402566194938 7447.214542488596 7647.599525754033 6773.4096891871495 6669.42863900682 6855.4038348503855 7242.048334377813 7372.089017560161 6697.414299008376 6077.158614491419 1.1834365782240361 1.1616288160327572 1.2254435032730888 1.258416969324741 1.1145685210577638 1.0974583785098337 1.128060705623708 1.1916832838801725 1.213081554261376 1.102063435210974 1.0 12.569181231531712 -10.819026090224824 0.9346634415172197 0.9939559042972861 1.1758361666138237 0.39130112209447954 0.05448687394150065 0.32450749033724935 0.47544812148766147 0.041675933597666394 0.00904300929583443 1.5169592334524808e-11 10.819026090224824 0.18188026231653764 RRS(ph)QVIEK ddPTM_A549_PD325901_60min_R1 2 RRSQVIEK 8 2 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 RRS(1)QVIEK;RRS(1)QVIEK 67.08 0.0026848 110019000.0 10642.8 10652.9 12895.900000000001 10868.7 13595.1 12704.7 13708.3 12639.4 14247.8 13874.099999999999 14399.4 True False 11723.249221184738 11550.657269355797 13771.093323346406 11540.03491439136 12640.227076548876 12601.237135429856 14229.976857969586 12387.29725158251 13649.01451405915 12998.08695823128 12628.365085317258 0.928326758213153 0.9146597513866233 1.0904890086966026 0.9138186009374026 1.0009393132960187 0.9978518240719106 1.126826533904574 0.9809106062339745 1.0808219767045364 1.0292770972660499 1.0 13.624380254147567 -7.312711116404474 2.758993037723583 1.0402254687374404 0.968400678561507 0.2563334909796796 0.05901076434791819 0.31087573466405916 4.672366135286218 0.008940813631391513 0.015390668723375084 4.8673086121215e-08 7.312711116404474 -0.07182479017593335 RRS(ph)RES(ph)LNVDVVK ddPTM_A549_MK2206_60min_R1 2 RRSRESLNVDVVK 13 3 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 2 RRS(1)RES(1)LNVDVVK;RRS(1)RES(1)LNVDVVK 87.287 6.5254e-05 30743000.0 3642.5 3983.2 3240.0 2650.7 6786.1 5166.8 4817.1 5034.4 6476.7 5685.4 5725.2 True False 4257.264949425095 4185.927866377224 3699.4807195148737 3300.121618994446 5787.873679492316 5713.547346555734 5692.3047164476375 5748.041617203385 5009.737791164629 4401.064191318213 4303.474832518385 0.989262192787997 0.9726855690538865 0.8596496699737745 0.766850451653094 1.3449302958059277 1.327659058996327 1.322722901371428 1.3356745051160535 1.1641145785980909 1.0226768745253052 1.0 12.071286316378844 -6.7531195891880405 24.999573809041586 1.1525592176491581 0.899834219428879 0.532481232153304 0.13585924656661927 163.92599112210144 492566.0408184872 0.02360215619099067 0.048489660874548875 1.7655515838994718e-07 6.7531195891880405 -0.25272499822027916 RRS(ph)RES(ph)LNVDVVK ddPTM_A549_PD325901_60min_R1 2 RRSRESLNVDVVK 13 3 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 2 RRS(1)RES(1)LNVDVVK;RRS(1)RES(1)LNVDVVK 90.714 6.1724e-05 43218000.0 4072.5 3782.7999999999997 4952.6 3571.5 4150.0 2745.8 2086.4900000000002 2914.8999999999996 3798.6 4196.1 4448.7 True False 4485.937201983954 4101.589831737752 5288.713218403166 3792.1034435349893 3858.518316722774 2723.4391151670898 2165.892518721139 2856.760032805185 3638.958051987332 3931.157529889096 3901.538102632812 1.1497868491805274 1.0512750930126615 1.3555457051244146 0.9719508931557084 0.9889736343005321 0.698042424173501 0.5551381177745168 0.7322137981626794 0.9326983246765456 1.0075917308705242 1.0 11.929827274170998 -6.459796264135243 5.827414607578541 0.9006045155319066 1.1733279313746126 0.4529255128215841 0.15604113653251103 0.20373378543369375 13.808445691819285 0.02490965770828833 0.05807899227033827 3.468995495139644e-07 6.459796264135243 0.272723415842706 RRS(ph)S(ph)DEDAAGEPK ddPTM_A549_PD325901_60min_R1 2 RRSSDEDAAGEPK 13 2 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 2 RRS(1)S(1)DEDAAGEPK;RRS(1)S(1)DEDAAGEPK 79.676 0.00061513 29586000.0 2507.26 3225.3 2779.8 2709.6 2937.1 2989.0 3276.2 3270.7 3456.7 3327.3999999999996 3061.6 True False 2761.7951894527428 3497.1073501913343 2968.4539442953446 2876.9658380519145 2730.8082284449306 2964.6585749997907 3400.877583805431 3205.463322685486 3311.426919998052 3117.307396142364 2685.0426090814412 1.028585237385696 1.3024401692410021 1.1055518948769527 1.0714786530095812 1.017044652926065 1.1041383719471054 1.2666009739669937 1.1938221433968537 1.2332865440563336 1.1609899171055618 1.0 11.390729267257408 -10.998786165524741 1.304950054159976 1.0008119460540286 1.1569049826894733 0.0 0.10119757433221409 0.47524241027589964 1.452636492924295 0.06457539697993084 0.015062354801906151 1.0027988667023568e-11 10.998786165524741 0.15609303663544472 RRS(ph)S(ph)TVAPAQPDGAESEWTDVETR ddPTM_A549_PD325901_60min_R1 1 RRSSTVAPAQPDGAESEWTDVETR 24 2 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 2 RRS(0.651)S(0.681)T(0.651)VAPAQPDGAES(0.012)EWT(0.004)DVET(0.001)R 49.888000000000005 0.007390100000000001 7206400.0 463.82 414.85 152.74 197.21 210.67 365.6 304.97 273.86 396.86 313.79 416.01 True False 510.9066649537629 449.81086541620175 163.1058549002341 209.39121380359387 195.87326597204512 362.62267481429353 316.57580023598734 268.39764746098615 380.18135431782537 293.9772458482635 364.8434073046678 1.400345065101102 1.2328874701046213 0.4470571528349701 0.5739207824817256 0.536869413152033 0.9939131900264274 0.8677032225269898 0.735651630500361 1.0420398086030083 0.8057628011427203 1.0 8.511133574369797 -8.776809299216826 24.553226867353242 1.019852154876379 0.8339131661394901 0.006264999528939996 0.2810098675260772 384.0859219567502 613569.2709446292 0.049575149596660095 0.05287574297205897 1.671824559315787e-09 8.776809299216826 -0.18593898873688897 RRS(ph)SDEDAAGEPK ddPTM_A549_MK2206_60min_R1 4 RRSSDEDAAGEPK 13 2 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RRS(0.575)S(0.425)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK 138.66 2.6397e-09 365079000.0 13951.52 14394.23 14298.7 12170.710000000001 13052.2 8945.369999999999 7539.019999999999 9360.57 13274.19 20692.6 20837.1 True False 16306.19549408462 15126.834824272719 16326.470667940535 15152.534496363938 11132.238670144783 9891.963115943969 8908.762347344466 10687.459463043353 10267.607159525629 16018.127288365149 15662.672995296038 1.0410863777199366 0.9657888426078839 1.042380867738467 0.9674296654801317 0.7107496066276888 0.631562895995774 0.5687893982093625 0.6823522055432756 0.6555462891046308 1.0226943570344516 1.0 13.935042823850129 -6.659010654448544 5.542214252003213 0.7783543530511929 1.009697278599189 0.4308870776865723 0.13738256363763776 0.20889884358562397 9.621475394344335 0.023930591603934306 0.050309519492594386 2.192751140421559e-07 6.659010654448544 0.23134292554799596 RRS(ph)SDEDAAGEPK ddPTM_A549_PD325901_60min_R1 4 RRSSDEDAAGEPK 13 2 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK 106.38 3.0757e-05 591567000.0 15602.1 15772.1 16646.5 17350.8 19198.1 19784.899999999998 18279.4 18843.5 19781.3 21735.5 21929.300000000003 True False 17186.013706341037 17101.27021918977 17776.23159353638 18422.519509474147 17849.69168584953 19623.778334062677 18975.032569871484 18467.65161006021 18949.96075232374 20363.116820596373 19232.135121286155 0.8936092429654121 0.8892028946001975 0.924298393362556 0.957902978181766 0.9281180468669579 1.0203640006846173 0.9866316168333223 0.9602496807346256 0.9853279749137107 1.0588068715292274 1.0 14.231231316844955 -6.279172730759244 0.7080586730608968 0.992059406655007 0.873847712262635 0.683691966233697 0.028320718521237253 0.35897596232938794 0.2523817756962362 0.003349722540578281 0.025827637129101723 5.258080965776952e-07 6.279172730759244 -0.118211694392372 RRS(ph)SGREEDDEELLR ddPTM_A549_MK2206_60min_R1 2 RRSSGREEDDEELLR 15 3 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 RRS(0.893)S(0.107)GREEDDEELLR;RRS(0.922)S(0.078)GREEDDEELLR 223.5 1.5381999999999998e-54 43182000.0 2002.24 2139.04 1512.96 1232.51 1972.77 1407.78 1721.47 1368.49 2569.5 2556.5 2501.8999999999996 True False 2340.1691619318904 2247.9079994214567 1727.520478209019 1534.4750053294767 1682.5781463126177 1556.7503451912655 2034.2388159313923 1562.4776483248559 1987.5123526483437 1978.9848744336398 1880.6091810727564 1.2443676152835683 1.1953084256130144 0.9185962163726059 0.8159457162993141 0.8946984643310228 0.827790463249386 1.0816914202083183 0.8308359142613413 1.0568449695191888 1.052310546152267 1.0 10.876984350901925 -5.696023066833782 6.089407506138027 0.9764666658505241 1.2276865993810384 0.527694930404454 0.09713808357902676 0.1358046169082103 9.218999415429403 0.014380104829530563 0.05684654672648927 2.0136172970666505e-06 5.696023066833782 0.2512199335305143 RRS(ph)SGREEDDEELLR ddPTM_A549_PD325901_60min_R1 2 RRSSGREEDDEELLR 15 3 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 RRS(0.899)S(0.101)GREEDDEELLR;RRS(0.901)S(0.099)GREEDDEELLR 169.43 1.0878000000000002e-27 47633000.0 1100.1599999999999 1272.85 1099.12 1102.5700000000002 1353.4499999999998 1382.9 1536.0100000000002 1184.79 1686.6799999999998 2087.5 1811.56 True False 1211.847433305014 1380.117536567464 1173.7128927454846 1170.6732447818495 1258.388341149021 1371.6381208990342 1594.4637010869237 1161.1584340002257 1615.7947051876984 1955.6948937450215 1588.7496044249983 0.7627680472302033 0.8686815925703769 0.73876518330922 0.7368519504403216 0.7920620956531775 0.8633444295304538 1.0035965998959246 0.7308630829969416 1.0170228843408513 1.2309648344194732 1.0 10.633676050682777 -8.19505001181313 0.6784360283868508 1.0126557098470876 0.7776453010101043 0.5351310248440757 0.10397408101136667 0.33188999891033955 0.3136934276954191 0.019073041993221292 0.027387921836680998 6.381899902617224e-09 8.19505001181313 -0.23501040883698332 RRS(ph)SKER ddPTM_A549_PD325901_60min_R1 1 RRSSKER 7 3 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 RRS(0.979)S(0.021)KER 40.103 0.035043 88398000.0 5070.3 5331.4 6622.0 6223.4 9452.6 7976.5 8982.6 9755.0 6255.2 6160.8 7071.4 True False 5585.033123442418 5780.695788549928 7071.408741320875 6607.805283633109 8788.68198569969 7911.542028600142 9324.437758467331 9560.428872350541 5992.31569704395 5771.806036591293 6201.662629297918 0.9005702917565338 0.9321203254818704 1.1402440222907482 1.065489317722072 1.4171493212449457 1.275713063013845 1.503538376050446 1.541591254446046 0.966243418133555 0.930686878922453 1.0 12.598439330077719 RRS(ph)SLPNGEGLQLK ddPTM_A549_MK2206_60min_R1 2 RRSSLPNGEGLQLK 14 2 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RRS(0.5)S(0.5)LPNGEGLQLK;RRS(0.5)S(0.5)LPNGEGLQLK 84.035 5.5499e-05 9886700.0 1945.91 1738.9099999999999 1676.4099999999999 2048.65 2443.59 1627.06 1202.19 1394.5100000000002 2628.0 2423.71 2996.1 True False 2274.332035068165 1827.4130915148687 1914.1501459882484 2550.569341967393 2084.1411480041 1799.234409244983 1420.6123616005862 1592.1860630077645 2032.762196053647 1876.1922276602997 2252.085681846632 1.009878111388414 0.811431423877467 0.8499455244610018 1.1325365471335065 0.9254271117674249 0.7989191635771484 0.6307985406824014 0.7069828984935543 0.902613169844787 0.8330909622061482 1.0 11.137046001255959 -4.4433978209570695 16.616234308117555 0.9073652386964951 0.8895286105209134 0.0 0.14031159484032998 0.0 0.0 0.0196331135795949 0.0 3.602484982292126e-05 4.4433978209570695 -0.017836628175581737 RRS(ph)SPSARPPDVPGQQPQAAK ddPTM_A549_MK2206_60min_R1 3 RRSSPSARPPDVPGQQPQAAK 21 3 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RRS(0.446)S(0.446)PS(0.108)ARPPDVPGQQPQAAK;RRS(0.436)S(0.436)PS(0.127)ARPPDVPGQQPQAAK;RRS(0.333)S(0.333)PS(0.333)ARPPDVPGQQPQAAK 75.32600000000001 8.0783e-05 29461700.0 3437.78 4393.4 3693.51 3197.33 4696.9 3466.84 3669.03 4279.4 5481.2 5890.1 5827.9 True False 4017.9932183485544 4617.005294271363 4217.3052568936355 3980.6759935336004 4005.992231945808 3833.6987076978558 4335.645258306422 4886.018055112855 4239.716951677794 4559.522319147887 4380.671588142581 0.9172094135575675 1.0539491950888262 0.9627074689435432 0.9086908053797798 0.9144698823780949 0.8751394918703223 0.9897215920138743 1.115358217753215 0.9678235097909834 1.0408272401632235 1.0 12.096936346865164 -7.9670921750557335 24.98179680328989 0.9969518695400764 0.9417156958721262 0.30275353573895225 0.05776583082991177 261.95147489296795 198858.64960251944 0.009184906925434142 0.012690725910328108 1.0787177498959479e-08 7.9670921750557335 -0.055236173667950195 RRS(ph)SPSARPPDVPGQQPQAAK ddPTM_A549_PD325901_60min_R1 3 RRSSPSARPPDVPGQQPQAAK 21 3 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RRS(0.333)S(0.333)PS(0.333)ARPPDVPGQQPQAAK;RRS(0.441)S(0.441)PS(0.118)ARPPDVPGQQPQAAK;RRS(0.458)S(0.458)PS(0.084)ARPPDVPGQQPQAAK 76.79899999999999 7.053800000000001e-05 48599600.0 5555.799999999999 6100.6 5387.700000000001 5675.1 6050.4 7048.9 6129.0 5883.7 6657.0 6549.5 7119.0 True False 6119.82072603621 6614.71897205756 5753.341720872017 6025.638037912758 5625.440776746865 6991.496095455348 6362.242448917492 5766.344987826643 6377.229440341088 6135.963452255341 6243.408131059177 0.9802051375741151 1.0594724601057581 0.9215065874439283 0.9651199971914257 0.9010208300754677 1.11982044881459 1.0190335655404534 0.9235893067987528 1.0214340159209179 0.9827907007601617 1.0 12.608118062391378 RRS(ph)SPVR ddPTM_A549_MK2206_60min_R1 2 RRSSPVR 7 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.992)S(0.008)PVR;RRS(0.984)S(0.016)PVR 63.216 0.0087641 145721000.0 4748.1 3635.2 3002.37 2457.88 4513.0 2843.0099999999998 2422.7599999999998 2680.06 4249.4 7075.6 6530.1 True False 5549.463200100294 3820.2161528054053 3428.1512122993413 3060.060710338428 3849.143678334949 3143.8554311626954 2862.944131286598 3059.966712339524 3286.9176848973993 5477.217045782379 4908.495948408495 1.1305832292475708 0.7782865042486288 0.6984117432980397 0.6234212562262798 0.7841798625876375 0.640492620184813 0.5832630120057172 0.6234021061648571 0.6696384634814933 1.1158646362045552 1.0 12.261065309164437 -10.71347919550627 0.9924423248473622 0.9984037918701528 0.7148294533699313 0.4089264865375657 0.14838529977689827 0.48480202972743 0.8560109166568851 0.09515132792352712 0.025312573339498406 1.9342865166877663e-11 10.71347919550627 -0.2835743385002215 RRS(ph)SPVR ddPTM_A549_PD325901_60min_R1 2 RRSSPVR 7 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.985)S(0.015)PVR;RRS(0.928)S(0.072)PVR 66.62100000000001 0.007923600000000001 117713600.0 2588.2 2645.8 2219.5 2141.1 1957.21 1690.95 1745.2600000000002 1846.98 1947.15 3163.7 2591.5 True False 2850.9521586678625 2868.7708514359083 2370.128616937735 2273.3508842090896 1819.7423216079471 1677.179463832686 1811.6768243429167 1810.1405349722206 1865.318056896523 2963.9434420795797 2272.761928872013 1.2543998218426728 1.2622399271091709 1.042840689483938 1.0002591363968196 0.8006744122606354 0.737947711340396 0.7971256475780831 0.7964496905624451 0.8207274300050833 1.3041152284483244 1.0 11.150230854860974 -6.025484362314844 1.6319186044187788 0.8768524371083121 1.2770858768994988 0.44341411409656617 0.1505412551119355 0.183844959620491 0.8948413048571806 0.01501126436007857 0.07258471085260781 9.430085658530144e-07 6.025484362314844 0.40023343979118675 RRS(ph)STVAPAQPDGAESEWTDVETR ddPTM_A549_MK2206_60min_R1 1 RRSSTVAPAQPDGAESEWTDVETR 24 2 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 RRS(0.333)S(0.333)T(0.333)VAPAQPDGAESEWTDVETR 58.565 0.00032851 3320200.0 743.12 752.55 711.91 664.14 740.22 929.72 975.31 861.76 1261.0 790.42 1207.4 True False 868.5404884603374 790.8515805990615 812.869542910442 826.8543298143777 631.3346185635049 1028.102353301812 1152.5112023828742 983.9171190293158 975.3855134032146 611.8635730294686 907.5692574552329 0.9569963739138436 0.871395294742089 0.8956556606926914 0.9110647182263811 0.6956324416868499 1.1328087028691851 1.2698878822916977 1.0841234549836534 1.0747229540786059 0.674178381432945 1.0 9.825863930486108 -7.283070644536561 24.999001705585417 1.0658225983953284 0.8705749331601402 0.2404447846525477 0.1491199744636689 528.1447747094811 610369.421283781 0.01485922867884391 0.02376605398631845 5.2110993783281254e-08 7.283070644536561 -0.19524766523518822 RRS(ph)TDSSSVSGSLQQETK ddPTM_A549_MK2206_60min_R1 1 RRSTDSSSVSGSLQQETK 18 2 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 RRS(0.361)T(0.361)DS(0.085)S(0.085)S(0.085)VS(0.021)GS(0.002)LQQETK 46.131 0.0091237 4130400.0 1687.1 2320.2 1712.6 1308.6 1804.7 1739.2 1582.8 1720.1 2432.2 2529.8 2551.8 True False 1971.8412343651567 2438.288269624532 1955.4724321732008 1629.2070587452865 1539.2310206716338 1923.2409896124752 1870.3742719049455 1963.9294425853213 1881.3105834252965 1958.3164229775946 1918.1176339028177 1.028008501414497 1.2711880786285858 1.019474717092495 0.8493780725170222 0.802469563631372 1.0026710331103275 0.9751092627719979 1.0238837326099182 0.9808108481842016 1.0209574159395969 1.0 10.905475485020302 -5.968512930902921 13.386568618505652 0.9704851637089746 1.1486100634362186 0.4224976045155684 0.085227097809532 1.0149116183143625 429.1388949365201 0.011428692174096878 0.0355080567746425 1.0751945865302858e-06 5.968512930902921 0.178124899727244 RRS(ph)TGVVNIPAAECLDEYEDDEAGQKER ddPTM_A549_MK2206_60min_R1 3 RRSTGVVNIPAAECLDEYEDDEAGQKER 28 3 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RRS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER;RRS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER;RRS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER 116.73 7.3463e-21 20396900.0 3508.67 4014.08 4270.490000000001 3909.43 5202.07 4837.8099999999995 3418.3 4548.5 6469.68 6465.08 6660.82 True False 4100.847717254454 4218.379526478083 4876.109696876872 4867.2405255009835 4436.852394140462 5349.743843121626 4039.360862808109 5193.263804197041 5004.307809955995 5004.613937806936 5006.754564720028 0.819063060560423 0.8425377101970986 0.9739062767798242 0.9721348355675099 0.8861733357981301 1.0685053109689986 0.8067822799366611 1.0372515243290028 0.9995113092258858 0.9995724521972426 1.0 12.28966001970429 -3.101874421106135 0.3522011078059904 0.9985050993963864 1.3355512520939312e-14 0.35983133787726207 0.06959447777858416 17.41891158540312 0.44063937622889204 0.016696142932822903 10.274935746154542 0.0007909072905975582 3.101874421106135 -0.9985050993963731 RRS(ph)TGVVNIPAAECLDEYEDDEAGQKER ddPTM_A549_PD325901_60min_R1 1 RRSTGVVNIPAAECLDEYEDDEAGQKER 28 3 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RRS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER 92.589 2.5014e-10 5597900.0 986.05 1060.9 1245.2 1234.6 860.96 1046.2 875.13 1438.3 1195.2 1086.7 1224.4 True False 1086.1530701083564 1150.3057662288745 1329.7067599958848 1310.8584380199627 800.4891397507573 1037.6800940665046 908.4335510395111 1409.6119781754771 1144.9699004199588 1018.0855765426178 1073.806562111091 1.0114978883840982 1.071241140459588 1.2383112628606936 1.2207584534060125 0.7454686607399802 0.9663566331969865 0.8459936669166387 1.3127243098647086 1.0662720277746875 0.9481089168807776 1.0 10.068518411115903 RRS(ph)TPAPKEEEK ddPTM_A549_MK2206_60min_R1 2 RRSTPAPKEEEK 12 3 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RRS(0.5)T(0.5)PAPKEEEK;RRS(0.5)T(0.5)PAPKEEEK 63.894 0.0011812 6117800.0 846.0 925.51 975.9200000000001 969.15 1360.74 1060.6200000000001 1358.24 1478.6 1642.52 1626.3200000000002 1605.97 True False 988.7841172858291 972.6145058271705 1114.3201307990596 1206.5917935067966 1160.576948561379 1172.8541044174244 1605.0146266566687 1688.196078022588 1270.491842565462 1258.933182471706 1207.1633264828392 0.8190972137686834 0.8057024964972683 0.9230897811033696 0.9995265487581471 0.9614083886583987 0.9715786411724606 1.3295753701638693 1.3984819129166834 1.052460603046263 1.0428855440296567 1.0 10.23740516735485 -6.255986371331847 1.039253644125344 1.074156317744609 0.7958725969993194 0.427225880585103 0.13350502183098018 0.6268154297820457 1.1300315181001934 0.023613853104042414 0.12969404955610697 5.546431180337506e-07 6.255986371331847 -0.2782837207452895 RRS(ph)VSQDLIK ddPTM_A549_MK2206_60min_R1 1 RRSVSQDLIK 10 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 RRS(0.965)VS(0.035)QDLIK 67.887 0.0014325999999999998 22915000.0 5909.1 5825.4 5527.2 5056.0 6940.9 4915.8 4515.7 5064.0 7177.5 8167.6 7620.4 True False 6906.4116163755225 6121.887977704834 6311.040071883518 6294.720226972462 5919.902804554628 5435.986693156052 5336.144237832429 5781.837507849582 5551.807710112274 6322.533487355442 5728.044367659316 1.205718945783538 1.068757080910401 1.1017791879399208 1.098930075072849 1.0334945794027977 0.9490126724310606 0.9315822111924333 1.0093911877662791 0.9692326654203173 1.1037857044286574 1.0 12.483826951976926 -6.860580671572617 2.501031421287797 0.9804238371961757 1.1174881845541094 0.5439199710003904 0.052775703793639564 0.10651129450229271 1.3540566269865324 0.005392433445417483 0.011314320153213259 1.378539861048538e-07 6.860580671572617 0.1370643473579337 RRS(ph)VSQDLIK ddPTM_A549_PD325901_60min_R1 2 RRSVSQDLIK 10 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 RRS(0.982)VS(0.018)QDLIK;RRS(0.903)VS(0.097)QDLIK 67.135 0.0015532999999999999 69422000.0 18644.3 19524.0 18414.5 18308.6 22774.0 19771.3 19806.2 22248.5 23282.0 26079.0 28603.0 True False 20537.055610791773 21169.355999483952 19664.218705384053 19439.480640152506 21174.432806034827 19610.289087953617 20559.935779368512 21804.7362138894 22303.538505335913 24432.367489330023 25085.012329356043 0.8186982466322343 0.8439045483230739 0.7839030911047933 0.7749440337090533 0.8441069323795065 0.7817532170396598 0.8196103517680156 0.8692336255450885 0.8891181001826706 0.9739826781244092 1.0 14.614538026740615 -9.463603448582804 0.4974008900414929 0.9994316973429169 0.8021359998851558 0.8759492780612776 0.025172057319366115 0.19329199106818062 0.10893540550999638 0.01520316300507543 0.008127315893892983 3.438717916509018e-10 9.463603448582804 -0.1972956974577611 RRS(ph)VSQDLIKK ddPTM_A549_MK2206_60min_R1 1 RRSVSQDLIKK 11 3 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 RRS(0.824)VS(0.176)QDLIKK 40.589 0.028977999999999997 3872800.0 2090.4 2156.9 1953.6 1759.1 2534.0 2105.4 1979.0 1692.1 2734.0 2607.1 3001.6 True False 2443.20841462683 2266.676997135228 2230.64985606304 2190.0795789689996 2161.251956769502 2328.192030548588 2338.558683409077 1931.9603568389161 2114.753365300865 2018.1542992904126 2256.2198800543533 1.0828769111669967 1.004634795204722 0.9886668740855623 0.970685347793425 0.9579083917642977 1.0318994399129666 1.0364941396371083 0.8562819492541545 0.9372993226395646 0.8944847606084361 1.0 11.13969195718876 -2.000021979715217 0.7842120606569561 0.9689922590877393 26.571058882666097 0.321214994460001 0.05123275681669049 404.02339617947376 1.4125072799996967 0.007603548026797291 18361.93631712031 0.009999493911160664 2.000021979715217 25.60206662357836 RRS(ph)VTPPEEQQEAEEPK ddPTM_A549_MK2206_60min_R1 4 RRSVTPPEEQQEAEEPK 17 2 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 RRS(0.5)VT(0.5)PPEEQQEAEEPK;RRS(0.572)VT(0.428)PPEEQQEAEEPK;RRS(0.5)VT(0.5)PPEEQQEAEEPK;RRS(0.5)VT(0.5)PPEEQQEAEEPK 159.98 9.0015e-23 73562200.0 4877.610000000001 5131.639999999999 4507.85 4626.5 7593.799999999999 4705.17 4399.47 3808.47 7229.3 7279.9 7035.6 True False 5700.8313218847925 5392.818556993376 5147.130914032445 5759.992707691474 6476.762079446033 5203.0679663609335 5198.796751337917 4348.332285450215 5591.875092819872 5635.365533889872 5288.4663473182345 1.0779743970150566 1.0197320362505584 0.9732747787347724 1.089161267067975 1.2246957159385876 0.9838519571934865 0.9830443099962641 0.8222293572228632 1.0573717833442384 1.0655954229050826 1.0 12.368633686791012 RRS(ph)VTPPEEQQEAEEPK ddPTM_A549_PD325901_60min_R1 2 RRSVTPPEEQQEAEEPK 17 2 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 RRS(0.5)VT(0.5)PPEEQQEAEEPK;RRS(0.793)VT(0.207)PPEEQQEAEEPK 133.95 1.0028e-12 40838000.0 6541.200000000001 5821.6 5325.3 6040.5 6892.7 6116.0 5592.700000000001 6487.200000000001 6252.3 7574.6 8651.1 True False 7205.257808623073 6312.206662906978 5686.70688163033 6413.607966029147 6408.5805305241165 6066.1933237533385 5805.533258942868 6357.807706890049 5989.537573958932 7096.33846331068 7587.069543841277 0.9496759937401477 0.8319690002091578 0.7495261311063708 0.8453340158500755 0.8446713837922065 0.7995436563089773 0.7651878271836124 0.8379793634620013 0.789440183637288 0.9353200761249193 1.0 12.88932704633261 -10.764084772519201 0.9055724519017437 1.005264387926979 0.8194606454807506 0.5059575521315316 0.053502951668822685 0.3126178313549218 0.4341265715035427 0.03963215841490524 0.008995525940759112 1.721532506033379e-11 10.764084772519201 -0.18580374244622833 RRS(ph)YS(ph)REHEGR ddPTM_A549_PD325901_60min_R1 1 RRSYSREHEGR 11 3 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 2 RRS(0.979)Y(0.16)S(0.861)REHEGR 57.136 0.0046389 6323200.0 460.77 485.34 562.72 499.26 420.46 356.55 385.78 491.18 625.37 661.17 685.08 True False 507.5470311990537 526.241305100878 600.9095631102512 530.0981562982721 390.92834010825493 353.646375013776 400.4610690069159 481.38302957674404 599.0878736827563 619.4236133640218 600.8195030799299 0.8447579158087555 0.8758725414259224 1.0001498953177446 0.8822918590040354 0.6506585390525312 0.5886066833731407 0.6665247498692477 0.8012107248667382 0.9971178875048214 1.0309645578892217 1.0 9.230787834417884 -8.750510750736979 6.039393346997659 0.9989902269160819 0.7858397414154962 0.4320107191843444 0.11253733169053166 0.12610075477417326 16.417267867367332 0.02179674839662563 0.024102089035199545 1.776189299089832e-09 8.750510750736979 -0.21315048550058568 RRSDS(ph)TLFSTVDTDEIPAK ddPTM_A549_PD325901_60min_R1 2 RRSDSTLFSTVDTDEIPAK 19 2 Q9HC62;F8WED6;F8WCX8;F8WED7;F8WET6 Q9HC62 SENP2 Sentrin-specific protease 2 1 RRS(0.274)DS(0.325)T(0.325)LFS(0.038)T(0.038)VDT(0.001)DEIPAK;RRS(0.259)DS(0.324)T(0.324)LFS(0.047)T(0.047)VDTDEIPAK 62.19 0.00053069 8252300.0 1410.96 1099.41 704.75 916.5799999999999 1248.9299999999998 1281.25 892.6700000000001 1081.75 1607.3 1421.3400000000001 1430.51 True False 1554.1996205061475 1192.0611390797314 752.5785730060228 973.1950648957861 1161.209465374596 1270.8159247970837 926.6410453377667 1060.1736476335418 1539.750770536313 1331.596349832599 1254.5663387500313 1.2388341473075482 0.9501778441365039 0.5998714852782064 0.7757222833392889 0.9255863396841573 1.0129523529726157 0.7386146246048749 0.8450518835774202 1.2273171397778941 1.0613997113610711 1.0 10.292973044014406 -8.747282703630724 24.99791092746104 1.1073442067699277 0.8754452329055041 0.24574307801848705 0.1631000737185655 229.67330201201918 405557.6918970839 0.029497934959641474 0.03336911399752682 1.7894406399369801e-09 8.747282703630724 -0.2318989738644236 RRSEDS(ph)EEEELASTPPSSEDSASGSDE ddPTM_A549_PD325901_60min_R1 1 RRSEDSEEEELASTPPSSEDSASGSDE 27 2 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 RRS(0.161)EDS(0.836)EEEELAS(0.002)TPPSSEDSASGSDE 74.83800000000001 2.4671e-06 3301900.0 176.95 0.0 239.94 259.88 165.78 281.15 204.06 189.09 0.0 362.73 218.77 True False 194.91383373629483 0.0 256.2237712764314 275.9321973696972 154.13618470995226 278.86040761498555 211.8256149659166 185.3184516117647 0.0 339.8271658961111 191.8626768972913 1.015902815953292 0.0 1.3354539581118956 1.4381754796291637 0.8033672166080799 1.453437490420642 1.104048053490424 0.965891097782244 0.0 1.7711999613037235 1.0 7.583930280713052 -8.559553021729517 24.896062911088553 0.525417987266607 1.019697678724205 0.0 0.5728661916291301 216.15929539336202 146737.20046893347 0.08604845632930615 0.09756990800951668 2.7570648299029856e-09 8.559553021729517 0.49427969145759787 RRSPRPS(ph)PVPK ddPTM_A549_PD325901_60min_R1 1 RRSPRPSPVPK 11 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RRS(0.412)PRPS(0.588)PVPK 50.284 0.0078907 73162000.0 1457.7 922.57 794.51 978.04 1544.3 927.02 1026.2 1132.8 1012.1 1464.7 1573.4 True False 1605.684630897978 1000.3182116596969 848.4302263767507 1038.451309509999 1435.8336955457792 919.4706564725013 1065.2526025581865 1110.2054153355914 969.5649566725577 1372.2185920327338 1379.881774604371 1.1636392772550006 0.7249303745217596 0.6148571870369156 0.7525654216338467 1.0405483440474097 0.6663401701469134 0.7719883124506137 0.8045656053786934 0.7026434978101974 0.9944464933788735 1.0 10.430328949855008 -10.948413699977175 1.2012325455980668 1.000359929696424 0.7885204929163129 0.18085085271447132 0.15458485791344265 0.6049855359962903 1.5473386735176617 0.1056489589716135 0.024480533000974414 1.1261242223499287e-11 10.948413699977175 -0.2118394367801112 RRSPS(ph)PYYSR ddPTM_A549_MK2206_60min_R1 1 RRSPSPYYSR 10 2 P62995;H7BXF3;P62995-3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 RRS(0.196)PS(0.804)PYYSR 60.161 0.0026739 93395000.0 2196.8 2440.1 2139.8 1561.3 2512.9 2368.3 2104.1 1665.7 2879.4 3091.3 3070.5 True False 2567.566133396583 2564.290667490228 2443.255815931457 1943.8185700894203 2143.255738818502 2618.9119340496914 2486.3877340884483 1901.8180759923077 2227.2204974569527 2392.973182998908 2308.010108511092 1.1124587903355987 1.1110396172157426 1.0585984034132385 0.8422053971606679 0.9286162703165656 1.1347055735987066 1.077286327698291 0.8240076891254083 0.9649959890746506 1.0368122627255851 1.0 11.172433827305312 -6.010671585919948 23.029717433494465 0.9768243313284495 1.105016784920646 0.27871426032158086 0.08696160666970104 172.5144629258619 372302.790856432 0.01179396620227421 0.033627399415047575 9.757272050519095e-07 6.010671585919948 0.12819245359219655 RRSS(ph)QLK ddPTM_A549_MK2206_60min_R1 1 RRSSQLK 7 2 A0A1B0GVW3;F5H7N0;P28472-4;P28472-3;P28472-2;P28472 A0A1B0GVW3 GABRB3 Gamma-aminobutyric acid receptor subunit beta-3 1 RRS(0.153)S(0.847)QLK 50.04 0.017450999999999998 27884000.0 1424.1 1353.5 1071.8 1011.2 1402.1 1217.1 1168.5 1089.6 1633.9 1996.0 1813.6 True False 1664.453264097812 1422.387368734077 1223.7973565358143 1258.9440453944928 1195.8529473506387 1345.892714154406 1380.801324691009 1244.0541367600517 1263.8242588021512 1545.102213717795 1363.2330671863585 1.2209601601970792 1.0433926545442518 0.8977168952200285 0.9234987587213441 0.8772182659996771 0.9872799791544506 1.012887200235621 0.9125762620530575 0.927078640639651 1.133410163609664 1.0 10.412816520414168 -5.364078383243971 2.9411251435197343 0.9540433005129323 1.2384359837773398 0.5384625727924445 0.06879892623754148 0.12006726055276443 1.607216362510751 0.0065333970285027 0.07007652911495502 4.324357762142263e-06 5.364078383243971 0.2843926832644075 RRSSRS(ph)S(ph)PELTR ddPTM_A549_MK2206_60min_R1 1 RRSSRSSPELTR 12 3 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRS(0.484)S(0.516)RS(0.524)S(0.476)PELTR 45.864 0.014851 13848000.0 420.6 262.98 327.64 205.24 366.78 267.83 111.5 161.49 249.79 670.42 672.45 True False 491.58699731728126 276.3645587216015 374.1042786857571 255.5238092135737 312.8271478705278 296.17159282883455 131.75810672062264 184.38170204238327 193.21296383266375 518.9716563730885 505.4621063241437 0.9725496553880845 0.5467562360537743 0.7401232931313961 0.5055251541442177 0.6188933729285682 0.5859422281576635 0.2606686140704058 0.364778486330571 0.3822501457879016 1.0267271272760483 1.0 8.981459129445227 -10.876546753998765 1.1528112947826525 0.9972573540818251 0.5342226542257001 0.47380729074908445 0.18505240104260587 0.3563070070648346 0.84868839802477 0.1293652224822864 0.03198300665289407 1.3287804994811663e-11 10.876546753998765 -0.463034699856125 RRSSRS(ph)S(ph)PELTR ddPTM_A549_PD325901_60min_R1 2 RRSSRSSPELTR 12 3 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRS(0.344)S(0.385)RS(0.456)S(0.814)PELTR;RRS(0.423)S(0.463)RS(0.499)S(0.614)PELT(0.001)R 49.482 0.010431999999999999 31268000.0 812.64 858.0 665.61 638.23 1136.44 648.5699999999999 911.21 669.82 873.11 1096.32 1039.25 True False 895.1386145660505 930.3066711512615 710.7822972380827 677.6520175745031 1056.6203749051635 643.288260952698 945.8865951832445 656.4599146363755 836.4162230218128 1027.0981681008584 911.4288383485392 0.9821267189526219 1.0207123496738681 0.7798549566699937 0.7435051306938814 1.1593010122652074 0.7058019604890956 1.0378063052044095 0.7202536139034684 0.9176977815814504 1.1269098857590527 1.0 9.831986209100647 -10.024513614618154 1.0820961448527242 0.9891081581949004 0.8953278486156216 0.12589557391190076 0.14659448746247572 0.9024821281549946 2.1281903134821056 0.044905404957915236 0.024409612409729383 9.451187636213342e-11 10.024513614618154 -0.09378030957927874 RRSVS(ph)QDLIK ddPTM_A549_MK2206_60min_R1 1 RRSVSQDLIK 10 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 RRS(0.414)VS(0.586)QDLIK 58.831 0.0034173000000000003 22610000.0 6830.6 7814.2 7193.8 5857.7 8335.5 6240.0 5844.9 7093.9 8978.2 9007.4 8429.8 True False 7983.438287863573 8211.90940285321 8213.989012359903 7292.836762962143 7109.358991970077 6900.312658223231 6906.842672388946 8099.482049157609 6944.652035239288 6972.622084089012 6336.448009355741 1.2599232686950255 1.2959799229360611 1.2963081209270526 1.1509345223371672 1.1219785882363646 1.08898749710168 1.0900180451557433 1.2782369613383957 1.0959850100538244 1.1003991627160772 1.0 12.629458627343809 -2.000000000015392 0.09290911988372647 0.8877271981162418 2.037018620871645 0.48307520630673517 0.07048532442824545 58.285669413859026 0.3760812887386075 0.5711273213004882 8.56042258524771 0.009999999999645582 2.000000000015392 1.1492914227554032 RRSVT(ph)PPEEQQEAEEPK ddPTM_A549_PD325901_60min_R1 2 RRSVTPPEEQQEAEEPK 17 2 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 RRS(0.392)VT(0.608)PPEEQQEAEEPK;RRS(0.376)VT(0.624)PPEEQQEAEEPK 160.57 4.7267e-22 32330000.0 5150.299999999999 5006.299999999999 4940.2 4580.1 5727.4 5594.6 5057.0 5396.0 5466.3 6736.200000000001 7650.0 True False 5673.154664549533 5428.198470611379 5275.471679835909 4863.002374838193 5325.127182457352 5549.03943248372 5249.446902296579 5288.3725469198935 5236.570420570302 6310.875182392913 6709.098497345515 0.8455912022746636 0.8090801577527994 0.7863160276933142 0.7248369325271139 0.7937172460002283 0.827091662863382 0.782437000198096 0.7882389189862485 0.7805177435749638 0.9406442884822512 1.0 12.711903208943651 -10.679287253779496 0.7291155587051605 1.0150389789685124 0.7900889594412965 0.7998121859684661 0.03367956175286662 0.22023503349224435 0.18643825073658152 0.029779548947484785 0.0061097590163797415 2.092727812829174e-11 10.679287253779496 -0.22495001952721583 RRT(ph)AS(ph)PPPPPKR ddPTM_A549_PD325901_60min_R1 1 RRTASPPPPPKR 12 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)AS(1)PPPPPKR 58.885 0.058544000000000006 19315000.0 2926.6 2855.7 2906.9 2624.4 3083.5 2574.7 2353.2 2159.4 3069.7 3536.6 3589.6 True False 3223.7062775509494 3096.3598610800213 3104.1797146097338 2786.503227555152 2866.925597497514 2553.7324968390644 2442.752313720449 2116.3290729834716 2940.6911841693013 3313.2984724400662 3148.1019563492123 1.024015842641073 0.9835640344605626 0.9860480243815184 0.885137541983107 0.9106838460918932 0.811197519091972 0.775944473079664 0.6722555693328732 0.9341156115475876 1.052474957412888 1.0 11.620266550265258 -6.151425179662506 5.105374239045582 0.9134556895437753 0.999239449264427 0.1556147517445834 0.10291962894819713 0.4464224090442672 17.29789336937758 0.01619139246082547 0.0442471934424482 7.056263990323465e-07 6.151425179662506 0.08578375972065166 RRT(ph)CETGEPMEAESGDTSSEGPAQVYLPGR ddPTM_A549_MK2206_60min_R1 4 RRTCETGEPMEAESGDTSSEGPAQVYLPGR 30 2 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 RRT(0.751)CET(0.248)GEPMEAESGDTSSEGPAQVYLPGR;RRT(0.443)CET(0.443)GEPMEAES(0.033)GDT(0.033)S(0.041)S(0.007)EGPAQVYLPGR;RRT(0.813)CET(0.187)GEPMEAESGDTSSEGPAQVYLPGR;RRT(0.537)CET(0.439)GEPMEAES(0.016)GDT(0.002)S(0.003)S(0.003)EGPAQVYLPGR 109.84 4.8832999999999995e-15 63075200.0 4257.2 5102.4 3718.6699999999996 4087.9 5601.6 4483.4400000000005 4502.01 4412.55 6204.6 6238.900000000001 6279.7 True False 4975.711281452993 5362.090365887515 4246.033323221718 5089.435683512805 4777.612060394648 4957.87464493339 5319.966942038656 5038.042475367628 4799.26800671022 4829.528156895768 4720.277179096924 1.054114216742869 1.135969385364226 0.8995305068152931 1.0782069548904134 1.0121465073177534 1.0503354902310893 1.1270454552112688 1.067319202710782 1.0167343621182028 1.023145034423539 1.0 12.20465586314063 -8.895682551289012 4.873423594677351 1.0071939909528338 1.0524827147382623 0.0808162690941634 0.05936686018906494 0.3537823172787391 13.52356026330309 0.010082511086492324 0.01063378952188817 1.2715031742541943e-09 8.895682551289012 0.045288723785428475 RRT(ph)CETGEPMEAESGDTSSEGPAQVYLPGR ddPTM_A549_PD325901_60min_R1 3 RRTCETGEPMEAESGDTSSEGPAQVYLPGR 30 2 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 RRT(0.702)CET(0.298)GEPMEAESGDTSSEGPAQVYLPGR;RRT(0.79)CET(0.21)GEPMEAESGDTSSEGPAQVYLPGR;RRT(0.485)CET(0.485)GEPMEAES(0.017)GDT(0.004)S(0.005)S(0.003)EGPAQVYLPGR 176.22 6.9653e-58 63263100.0 6880.299999999999 6892.6 6731.9 7505.400000000001 7418.1 6786.799999999999 7418.4 7290.200000000001 7687.700000000001 8455.099999999999 8563.2 True False 7578.782990990842 7473.463591581802 7188.767216203256 7968.991511999865 6897.078247055715 6731.53055095637 7700.711271504243 7144.79124194874 7364.612703696888 7921.24354304361 7509.980686597273 1.0091614489124263 0.9951375247767758 0.9572284558644375 1.0611201073022423 0.9183882801941984 0.8963445888708916 1.0253969474578488 0.9513727851124477 0.9806433612858929 1.054762172315609 1.0 12.874593482230374 -13.086467840041944 14.2230500299416 0.9855671777297351 0.98380911188837 0.0 0.04997516674646822 0.0 0.0 0.0 0.005559591180283689 8.194683034136563e-14 13.086467840041944 -0.001758065841365175 RRT(ph)DEDAVLMDGMTESDTASVNENGLGK ddPTM_A549_MK2206_60min_R1 3 RRTDEDAVLMDGMTESDTASVNENGLGK 28 2 E7EU85;E9PFF5;P51114-2 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RRT(1)DEDAVLMDGMTESDTASVNENGLGK;RRT(1)DEDAVLMDGMTESDTASVNENGLGK;RRT(0.999)DEDAVLMDGMTESDTASVNENGLGK 78.752 1.1454999999999999e-06 29799000.0 3687.66 3922.29 4255.620000000001 3568.34 5862.1 4240.46 4344.49 4256.870000000001 6102.3 5607.8099999999995 6817.0 True False 4310.046853369101 4121.917807544872 4859.130907278357 4442.583460188867 4999.792855476915 4689.182662610464 5133.827597010562 4860.294358617626 4720.138793370688 4341.001826206811 5124.150760371314 0.841124130597746 0.804409940359792 0.9482802389144083 0.8669892179103141 0.975731021449223 0.915114110005356 1.0018884761771816 0.9485072914336797 0.9211553317039115 0.847165126322756 1.0 12.323097207266006 -2.4375033794862984 0.28556752081928427 0.972535053767492 8.638224645288188e-15 0.27958652152814745 0.05448203049677113 18.992002022247878 0.2976696186957289 0.014843782727869858 9.00821349614407 0.0036517128564342105 2.4375033794862984 -0.9725350537674834 RRT(ph)DEDAVLMDGMTESDTASVNENGLGK ddPTM_A549_PD325901_60min_R1 2 RRTDEDAVLMDGMTESDTASVNENGLGK 28 2 E7EU85;E9PFF5;P51114-2 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RRT(1)DEDAVLMDGMTESDTASVNENGLGK;RRT(0.979)DEDAVLMDGMT(0.005)ES(0.005)DT(0.005)AS(0.006)VNENGLGK 85.23899999999999 2.2111e-07 29083500.0 6187.8 5719.9 5432.9 6076.0 6779.700000000001 6215.8 4733.9 5555.1 6147.1 6958.2 8767.7 True False 6815.9809007824 6201.936046990795 5801.609264681692 6451.300720402803 6303.5172606952765 6165.180585641919 4914.051154989475 5444.299172608358 5888.758764116076 6518.858064506161 7689.32848302958 0.8864208254108709 0.8065640661181956 0.7545014207008972 0.8389940336975958 0.8197747403570024 0.8017840048384628 0.6390741617860172 0.7080331116851072 0.7658352451859252 0.8477798911690848 1.0 12.908641896307607 -10.584466419025162 0.9135873529589764 0.9976678566217745 0.7784886402617457 0.2805899819039065 0.07623845223907197 0.3099143339290403 0.4693354771827909 0.04339641035188312 0.012492890868333606 2.603356123032898e-11 10.584466419025162 -0.2191792163600288 RRT(ph)EEGPTLSYGR ddPTM_A549_PD325901_60min_R1 1 RRTEEGPTLSYGR 13 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RRT(1)EEGPTLSYGR 66.939 0.0086854 11842000.0 4428.6 4100.0 3762.7 4829.9 4466.4 5255.7 4596.1 4213.0 4128.5 5192.7 5273.4 True False 4878.188211836989 4445.521388951253 4018.0594489531954 5128.23195350123 4152.695472243519 5212.8993217217785 4771.007100582423 4128.968409965434 3954.9935022454815 4864.8320358082765 4624.805230836841 1.0547878166437508 0.9612342935676134 0.868806197969583 1.1088536051870224 0.8979179154517833 1.1271608341392843 1.0316125463556285 0.8927875237717445 0.8551697433385407 1.0518998731819036 1.0 12.175176893875342 -8.258365702592219 24.849207319926848 0.9267854488779431 1.0044266335952123 0.06507075512519411 0.0895165031501747 372.0308798853094 3007695.562739035 0.014120311335370278 0.01783067461954898 5.51612751889038e-09 8.258365702592219 0.07764118471726922 RRT(ph)FPGVASR ddPTM_A549_PD325901_60min_R1 1 RRTFPGVASR 10 2 Q9BWT1-3;Q9BWT1-5;Q9BWT1;Q9BWT1-6;Q9BWT1-2 Q9BWT1-3 CDCA7 Cell division cycle-associated protein 7 1 RRT(1)FPGVASR 53.448 0.039574 10577000.0 2510.5 3056.8 2875.9 2919.1 3049.1 2607.0 2208.1 2004.7 2909.9 2924.1 3036.9 True False 2765.3641118675805 3314.407263840533 3071.0758681915895 3099.4061772428913 2834.9417348239563 2585.7694563480954 2292.1304538186837 1964.7146858432732 2787.607022449832 2739.4718269699715 2663.38055249524 1.0382910205140587 1.2444362337689092 1.1530743758395292 1.1637113496000984 1.0644148212946836 0.970859929845762 0.860609443014539 0.737677041308495 1.0466424033314383 1.0285694338360487 1.0 11.379042864909016 -6.977839802704437 3.0376773176701417 0.9825158106216241 1.156872689754402 0.4797349784810143 0.09702595373985536 0.2191177679348791 4.156091305484045 0.015867458675169328 0.0308503515237137 1.0523499803710707e-07 6.977839802704437 0.17435687913277786 RRT(ph)FSLTEVR ddPTM_A549_MK2206_60min_R1 3 RRTFSLTEVR 10 2 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 RRT(1)FSLTEVR;RRT(1)FSLTEVR;RRT(0.97)FS(0.028)LT(0.001)EVR 159.08 2.1095e-08 73139200.0 5528.64 5143.400000000001 4776.629999999999 4898.31 7432.900000000001 6538.1 5437.86 5368.07 7977.299999999999 8172.9 7667.900000000001 True False 6461.739269729461 5405.177090762361 5454.027959647014 6098.396169893491 6339.530256303094 7229.957402360464 6425.848773200048 6129.010361524898 6170.454287130422 6326.6362136744365 5763.748806726005 1.1211000837144285 0.9377884553981242 0.9462639928517422 1.0580607126349728 1.0998970407775546 1.2543845411728332 1.1148731474385916 1.0633722195479185 1.0705626657306462 1.0976599476874445 1.0 12.492791746616895 -4.918288143557727 19.969562513089357 1.049845271833913 4.174863896800126 0.010862277527285302 0.08383230380985697 1003.9506490529446 259016.64432258252 0.011967945766726214 7848.714469505015 1.207012746529794e-05 4.918288143557727 3.125018624966213 RRT(ph)FSLTEVR ddPTM_A549_PD325901_60min_R1 4 RRTFSLTEVR 10 2 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 RRT(1)FSLTEVR;RRT(0.996)FS(0.003)LTEVR;RRT(1)FSLTEVR;RRT(0.999)FS(0.001)LTEVR 137.84 6.894e-07 89442000.0 7738.0 7951.9 8086.92 7634.3 7381.800000000001 7750.799999999999 7304.199999999999 8051.0 8699.11 8239.6 8810.900000000001 True False 8523.556063585474 8622.034520195475 8635.747021800451 8105.853372246721 6863.327833827512 7687.6800545695505 7582.1653280116 7890.416489112682 8333.51665866991 7719.350249821066 7727.215156896938 1.1030566498433476 1.1158010156479032 1.1175755879002025 1.049000604701919 0.888201984087584 0.9948836545217586 0.9812287058221908 1.0211203297568436 1.078463131860877 0.9989821809130225 1.0 12.915732853634779 -6.371399845647514 4.676036249722915 1.0189573263565366 1.1120797578005714 0.5114118979679336 0.04651271762699055 0.18793021901388926 6.50906044915713 0.007722489152110304 0.018486641916737455 4.2520675409460713e-07 6.371399845647514 0.09312243144403487 RRT(ph)IHTFPCLK ddPTM_A549_MK2206_60min_R1 2 RRTIHTFPCLK 11 2 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 RRT(0.854)IHT(0.146)FPCLK;RRT(0.807)IHT(0.193)FPCLK 51.092 0.008725299999999998 11990400.0 3855.6000000000004 4288.0 4407.2 4417.200000000001 6060.4 4921.1 4723.299999999999 4936.200000000001 6804.799999999999 5953.0 5730.0 True False 4506.331019630309 4506.240884471164 5032.207230569738 5499.414198295646 5168.923188163337 5441.847535638198 5581.4624706145 5635.921466478495 5263.523665032668 4608.213165461943 4307.082860045125 1.0462605819436446 1.0462396547495145 1.1683562620193046 1.2768303691835705 1.2000983858734453 1.2634647886902235 1.2958799846622926 1.3085240404266214 1.2220623182943646 1.0699151409902672 1.0 12.072495363205013 -10.600269475004888 0.9635160476353766 1.004165202068898 1.205906659315367 0.34638772419799013 0.08730508259321974 0.4352628624458967 0.7422770607826381 0.05740503318072296 0.017057583319144445 2.510328316731702e-11 10.600269475004888 0.20174145724646886 RRT(ph)IHTFPCLK ddPTM_A549_PD325901_60min_R1 1 RRTIHTFPCLK 11 2 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 RRT(0.821)IHT(0.179)FPCLK 40.025 0.03612 5803100.0 1941.8 2131.5 2280.5 2156.2 2171.2 2469.5 2043.0 2361.2 1972.4 2546.3 2416.3 True False 2138.9301065223935 2311.1289854999004 2435.2684437605344 2289.3835769145026 2018.7024022333703 2449.389210760116 2120.7474829724974 2314.104013674433 1889.5068872057639 2385.526183445723 2119.1104181877095 1.0093528341725742 1.0906128183147756 1.1491937479327798 1.0803512442133207 0.9526178461053438 1.1558572831966278 1.0007725245323402 1.092016722589418 0.8916509828787943 1.1257205679191817 1.0 11.049243047276148 -8.751646301119662 24.99924182967323 0.9488351851460832 1.0673910258474755 0.0 0.08201290171143621 146.4365566457718 373814.94916093355 0.011163967579289835 0.012582371048193692 1.7715511607878928e-09 8.751646301119662 0.11855584070139225 RRT(ph)LLEQLDDDQ ddPTM_A549_PD325901_60min_R1 1 RRTLLEQLDDDQ 12 2 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 RRT(1)LLEQLDDDQ 68.972 0.0021561999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RRT(ph)PEPLSR ddPTM_A549_PD325901_60min_R1 1 RRTPEPLSR 9 2 Q8IV36-3;Q8IV36-2;Q8IV36 Q8IV36-3 HID1 Protein HID1 1 RRT(1)PEPLSR 52.693000000000005 0.043795 10208000.0 1803.2 1729.4 1473.6 1532.4 1884.3 1569.0 1275.9 1553.9 1431.5 1465.7 1863.2 True False 1986.259536554319 1875.1426073298271 1573.607357476659 1627.052867667092 1751.9532684821033 1556.2225842002927 1324.4550726992693 1522.9062454890318 1371.3390331753446 1373.155451862074 1634.038211797931 1.2155526854961607 1.1475512590777233 0.96301747787478 0.9957251035622031 1.0721617498494302 0.9523783305458825 0.8105410651578169 0.9319893711747287 0.8392331484503422 0.840344761797946 1.0 10.67422600579978 -4.856905373934893 0.579960702617595 0.9195940536410949 1.5913057327261029 0.6670058865899477 0.07047719482391285 2.707432518692843 0.44276604067375175 0.014007744811369446 1.3537198919378588 1.3902555134359326e-05 4.856905373934893 0.671711679085008 RRT(ph)PS(ph)PPPR ddPTM_A549_MK2206_60min_R1 4 RRTPSPPPR 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)PS(1)PPPR;RRT(1)PS(1)PPPR;RRT(1)PS(1)PPPR;RRT(1)PS(1)PPPR 90.61399999999999 0.0035525999999999995 260423000.0 7531.5 7672.94 6268.55 5346.08 8476.61 6703.55 7088.5 7022.77 9691.55 10757.330000000002 9943.61 True False 8802.63307250381 8063.459872223455 7157.524649479926 6655.869839994653 7229.711897897364 7412.915211543645 8376.388694969806 8018.26915383112 7496.429399225155 8327.241681709847 7474.337207325183 1.1777142010500727 1.0788193853925812 0.957613290776503 0.8904963283529147 0.9672713041113431 0.9917822819498507 1.1206864853194705 1.0727732682401403 1.002955739256495 1.1141110510171766 1.0 12.867729937538037 -5.461970411138312 3.388574518211378 1.0017622447522054 1.1730698214424435 0.34297630453038597 0.06597845547353064 0.1807197905350612 3.7489866106821172 0.008256045295883056 0.05961044676027438 3.4516725508079298e-06 5.461970411138312 0.1713075766902381 RRT(ph)PS(ph)PPPR ddPTM_A549_PD325901_60min_R1 3 RRTPSPPPR 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)PS(1)PPPR;RRT(1)PS(1)PPPR;RRT(1)PS(1)PPPR 86.911 0.010248 234999000.0 4370.16 4058.0399999999995 4477.99 3733.26 5084.32 3653.9900000000002 4074.7599999999998 4473.47 4576.49 5085.67 5218.929999999999 True False 4813.815426058246 4400.0252724926195 4781.893329741383 3963.854991351374 4727.214903151791 3624.2331169165227 4229.827221594226 4384.243131480675 4384.156040472675 4764.5599282741305 4577.034695523061 1.0517323433809205 0.9613266154168375 1.0447579378016734 0.8660312309252415 1.0328116821521205 0.7918299418751397 0.9241413934946902 0.9578785006303403 0.9578594728069144 1.040970900424787 1.0 12.160197512774868 -4.440864758617803 1.065065354292029 0.9603157741432183 1.396788293974617 0.1224799518188261 0.07312375950903809 14.034853954897574 3.477443501056758 0.009951884597722803 10.57814794332368 3.623558201874763e-05 4.440864758617803 0.4364725198313987 RRT(ph)PT(ph)PPPR ddPTM_A549_MK2206_60min_R1 4 RRTPTPPPR 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR 81.92 0.00074911 144910000.0 10268.48 9454.22 9380.560000000001 7974.42 12183.96 9682.68 8159.110000000001 9346.33 13530.88 14019.8 14202.529999999999 True False 12001.54838376736 9935.399415761422 10710.864462423584 9928.153257985314 10391.71562399421 10707.294770757197 9641.514673769503 10671.200899435178 10466.157284375327 10852.717442826024 10675.649831112853 1.1241983929437571 0.9306599198117136 1.003298593703224 0.9299811641489913 0.9734035668450691 1.0029642167123278 0.9031314089818222 0.9995832636187908 0.9803766000148314 1.0165861202375832 1.0 13.382036269497332 -10.33570462140109 0.8857595788869826 0.999020645067692 0.9790840967899355 0.0204356646455921 0.05521067081311388 2.264709288726216 3.40576537903453 0.025970876158836434 0.00949707189768368 4.616314392160509e-11 10.33570462140109 -0.019936548277756483 RRT(ph)PT(ph)PPPR ddPTM_A549_PD325901_60min_R1 4 RRTPTPPPR 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR 78.653 0.00077292 277649000.0 12872.310000000001 12741.73 13778.92 13868.76 15984.640000000003 13642.3 13105.320000000002 13420.78 14883.12 15164.8 16634.19 True False 14179.097435106227 13815.52030420532 14714.040370577017 14725.40180696076 14861.934030414359 13531.201631890144 13604.05012410628 13153.092014501768 14257.63422384396 14207.291939959041 14588.29008281827 0.971950609331934 0.9470280770243868 1.00861994702908 1.0093987522433472 1.018757780798339 0.927538563812003 0.9325321917013972 0.901619856736545 0.9773341593087904 0.9738832899060624 1.0 13.832523172085116 -9.625984722764766 1.706002208389113 0.9941917376647322 0.9661186155980158 0.0405765582392984 0.03593335395355477 0.607582721339846 3.559009817970571 0.009153126568308814 0.007076817844558799 2.3660029252241024e-10 9.625984722764766 -0.028073122066716416 RRT(ph)SFYLPK ddPTM_A549_PD325901_60min_R1 1 RRTSFYLPK 9 2 Q9NS23-3;Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23 Q9NS23-3 RASSF1 Ras association domain-containing protein 1 1 RRT(0.5)S(0.5)FY(0.001)LPK 55.401 0.033194 2738400.0 986.45 1158.2 981.46 1115.2 1198.7 1620.0 1125.1 1353.3 1240.3 1607.7 1557.8 True False 1086.5936778138912 1255.8055787032533 1048.0677775984273 1184.083371197038 1114.5074472905035 1606.807257109289 1167.916296178344 1326.3073698566884 1188.1745042594348 1506.189547628201 1366.2004757078232 0.7953398473609308 0.9191956825023248 0.7671405450619737 0.8666981107465719 0.8157715262930804 1.1761138176129007 0.8548645070360198 0.970799961967173 0.8696926442247402 1.1024659809519168 1.0 10.415953484313556 RRTCET(ph)GEPMEAESGDTSSEGPAQVYLPGR ddPTM_A549_MK2206_60min_R1 1 RRTCETGEPMEAESGDTSSEGPAQVYLPGR 30 2 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 RRT(0.391)CET(0.473)GEPMEAES(0.13)GDT(0.004)S(0.001)SEGPAQVYLPGR 51.119 0.0025443 4688300.0 444.96 635.32 751.7 642.86 926.7 821.23 592.67 885.64 993.24 900.23 1096.3 True False 520.0583697724613 667.655074328876 858.3023632281884 800.3607288590819 790.3836575920668 908.1320135116446 700.350467355259 1011.1821821587483 768.2727258783575 696.8674177631119 824.0584536592444 0.631094029147003 0.8102035375817617 1.0415551948006643 0.9712426652564119 0.9591354279327587 1.1020237817827974 0.849879598037423 1.2270757950101454 0.9323036763555188 0.8456528959428319 1.0 9.68660286676245 -5.500153528756344 2.9363622197235606 0.988979391411891 0.6354445106506356 0.5319410977048042 0.10379508404093749 0.13898215218341756 2.1669965798141937 0.011965927464002348 0.08777824927929288 3.1611599513985654e-06 5.500153528756344 -0.3535348807612554 RRVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_A549_MK2206_60min_R1 4 RRVSEVEEEKEPVPQPLPSDDTR 23 3 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR 197.81 3.7738e-61 591459000.0 11860.82 11630.57 10427.79 9820.960000000001 17621.61 15305.31 13748.55 15125.819999999998 19361.820000000003 16380.39 16257.72 True False 13862.636446792088 12222.516334818976 11906.607423503077 12227.095640879646 15029.494512205614 16924.907745357472 16246.483570886237 17269.951305880997 14976.398684473148 12680.048522325073 12220.47943375442 1.1343774621887448 1.0001666793087454 0.9743159004560499 1.0005414032371718 1.2298612827490514 1.3849626634621928 1.32944731497289 1.4131975262917535 1.2255164591256993 1.0376064696202727 1.0 13.577013265617044 -6.754525531151524 24.992890246559675 1.178063657637067 1.0216204672394587 0.30790998384404733 0.13254099645957132 232.82359721761807 841626.6696076773 0.023714258105270006 0.048519154243258644 1.7598452035984517e-07 6.754525531151524 -0.15644319039760846 RRVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_A549_PD325901_60min_R1 4 RRVSEVEEEKEPVPQPLPSDDTR 23 3 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR 192.03 8.440899999999999e-51 853404000.0 19535.0 20571.6 19360.0 19190.7 23011.2 18153.600000000002 17508.1 21351.4 20264.300000000003 24855.899999999998 28325.9 True False 21518.17881909307 22305.240928036466 20673.886021137427 20376.065953758072 21394.9726963304 18005.763100406904 18174.38032629994 20925.52957715074 19412.661942001494 23286.494232065572 24841.993872674422 0.8662017601881198 0.8978844871454412 0.8322152451650907 0.8202266717476023 0.8612421694485779 0.7248115104083009 0.7315990986653976 0.8423450100021281 0.7814454041611749 0.9373842676002001 1.0 14.600493351609348 -10.770611825947645 0.9460592553719992 1.003478112219183 0.815532265713703 0.5279552215638246 0.05409813158516143 0.3206762972259591 0.49420250659763726 0.04196590751960415 0.00986685085947482 1.695852882981264e-11 10.770611825947645 -0.18794584650547996 RRVS(ph)HS(ph)PPPK ddPTM_A549_MK2206_60min_R1 1 RRVSHSPPPK 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRVS(1)HS(1)PPPK 40.066 0.032686 3587100.0 408.71 636.09 543.44 487.48 698.03 487.24 502.45 344.03 864.5 861.7 744.43 True False 477.69025599987157 668.4642640399405 620.5079636460381 606.9126218838089 595.3507116747495 538.7994133962638 593.738661181855 392.79730604768764 668.6921303228224 667.0413715233591 559.5674857772061 0.8536776495088668 1.1946088381305486 1.1089063954175058 1.084610234350631 1.063948007714999 0.9628854911895093 1.0610671210768925 0.7019659219515149 1.1950160567211097 1.1920659946795837 1.0 9.12816832548901 RRYEDDGIS(ph)DDEIEGK ddPTM_A549_MK2206_60min_R1 2 RRYEDDGISDDEIEGK 16 2 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RRYEDDGIS(1)DDEIEGK;RRYEDDGIS(1)DDEIEGK 136.58 5.9415e-11 32480000.0 4947.9 5265.0 4544.7 4619.8 7395.9 5969.700000000001 5721.2 5506.5 8068.2 7707.9 7937.1 True False 5782.984555459285 5532.966011366761 5189.206798141738 5751.651207390705 6307.972907289487 6601.409691633854 6760.667983587681 6287.063237948994 6240.765582267896 5966.680036630961 5966.099017183976 0.969307505424018 0.9274009692816572 0.8697822116588111 0.9640556066576161 1.057302751617233 1.1064867801590306 1.1331806535753317 1.053798004330896 1.0460378824241445 1.0000973868260168 1.0 12.54257220642084 -6.60817084998476 4.359687905975484 1.0416483953703202 0.9216940311777162 0.6421382830587961 0.04431292993546903 0.12715749130936543 4.477359990316371 0.007317700311073273 0.015761665297898797 2.465069396472661e-07 6.60817084998476 -0.11995436419260397 RRYEDDGIS(ph)DDEIEGK ddPTM_A549_PD325901_60min_R1 2 RRYEDDGISDDEIEGK 16 2 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RRYEDDGIS(1)DDEIEGK;RRYEDDGIS(1)DDEIEGK 189.11 7.936e-35 45992000.0 9989.599999999999 11301.5 11197.0 12702.599999999999 13873.0 10204.2 11240.3 11610.5 12690.0 13098.3 14208.8 True False 11003.736838045164 12253.917067617705 11956.895753030782 13487.210752302262 12898.608339251821 10121.100378391728 11668.055767428174 11378.919469238948 12156.68343066372 12271.271102630144 12461.207677004306 0.883039358885838 0.9833651268191982 0.9595294503514156 1.0823357656731236 1.0351009848792334 0.8122086270232883 0.9363503177111958 0.9131474062692501 0.9755622204336943 0.9847577715340812 1.0 13.605156273368385 -9.19995852856106 2.499194150505214 0.9913473300743512 0.9540484046229475 0.05028936543860396 0.06835910846129156 0.6579472427184835 8.500629553370114 0.014001205172202562 0.013137212590042207 6.3101759843106e-10 9.19995852856106 -0.037298925451403675 RRYEDDGIS(ph)DDEIEGKR ddPTM_A549_MK2206_60min_R1 2 RRYEDDGISDDEIEGKR 17 3 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RRYEDDGIS(1)DDEIEGKR;RRYEDDGIS(1)DDEIEGKR 175.77 1.1974e-30 158684000.0 6858.7 6900.6 6270.5 6028.8 10179.8 6375.6 6561.5 5809.0 11380.1 10813.8 10538.900000000001 True False 8016.280880884538 7251.811065154317 7159.751188801849 7505.856270643115 8682.364905099512 7050.261760219239 7753.639616568302 6632.443539316395 8802.525520285428 8370.955069489723 7921.800271156998 1.0119266589024645 0.9154246278535841 0.9038035476443728 0.9474937531525099 1.0960090645950396 0.8899822665169935 0.9787724192945177 0.8372394294596007 1.1111774115708422 1.056698576454658 1.0 12.951612612331814 -8.781205258676525 24.999212180814848 1.0525004386094001 0.9491146685747793 0.3304082125143707 0.0686382497721185 216.77144189464886 274163.9858883456 0.012493923486760015 0.013309566052334769 1.6549875891484003e-09 8.781205258676525 -0.1033857700346208 RRYEDDGIS(ph)DDEIEGKR ddPTM_A549_PD325901_60min_R1 2 RRYEDDGISDDEIEGKR 17 3 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RRYEDDGIS(1)DDEIEGKR;RRYEDDGIS(1)DDEIEGKR 180.16 1.6894e-31 270300000.0 21254.0 20702.9 20686.3 23945.0 26044.0 25075.0 20300.4 23832.0 30615.0 24596.0 26182.0 True False 23411.690433632153 22447.606039833863 22090.19671482724 25424.028266959358 24214.7592869224 24870.797513589747 21072.942830805132 23356.65206415767 29328.358016530347 23043.00436242037 22961.779981372583 1.0195938839508327 0.9776074005605908 0.962041999041346 1.1072324657576302 1.0545680390007341 1.0831389175301664 0.917739950818284 1.0171969282479592 1.2772684887810335 1.0035373730221995 1.0 14.486946862624151 -8.614931138475281 24.947815980080836 1.1317912333314655 1.0172849982300354 0.09054007858467028 0.08704231628916657 21.257900528555883 5752.3322721259665 0.018341462306947304 0.020797263162298345 2.426994887720504e-09 8.614931138475281 -0.1145062351014301 RRYS(ph)DFEWLR ddPTM_A549_MK2206_60min_R1 2 RRYSDFEWLR 10 2 O60493-4;O60493;O60493-3 O60493-4 SNX3 Sorting nexin-3 1 RRYS(1)DFEWLR;RRY(0.024)S(0.976)DFEWLR 58.486999999999995 0.0036431 17484000.0 1506.06 1872.31 1677.83 1379.51 3928.2 2666.9 1962.46 2669.4 4006.0 2322.34 2733.7 True False 1760.2461083681972 1967.6025817174 1915.7715233406295 1717.4900119285567 3350.366983655073 2949.1095878550545 2319.0135795063047 3047.7956246946437 3098.647396267468 1797.721781064823 2054.8468437182123 0.8566312928622263 0.9575422069690872 0.9323184008566165 0.8358238557676572 1.6304704138400106 1.4351967869871451 1.1285578711599191 1.4832227686515587 1.5079700006548982 0.8748689891709274 1.0 11.004815152514318 -6.7316804385975315 24.99874229854517 1.292745857610299 0.9026289221813482 0.4400588729091507 0.2163137318503712 165.62393240616166 139130.19306599462 0.032656382385606246 0.06797215618692219 1.8548959859887397e-07 6.7316804385975315 -0.3901169354289509 RS(ph)AAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK ddPTM_A549_PD325901_60min_R1 1 RSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK 38 3 O00267;O00267-2;M0R2M5 O00267 SUPT5H Transcription elongation factor SPT5 1 RS(0.5)AAGS(0.5)EKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK 77.598 1.9586e-06 1856800.0 0.0 169.97 367.26 135.56 222.59 0.0 253.04 223.32 123.6 237.85 488.72 True False 0.0 184.29396840976693 392.18447211378793 143.9332333209025 206.95604629381273 0.0 262.66957566880103 218.8657074088491 118.40552183057811 222.83211040826498 428.61053825133337 0.0 0.4299800214004505 0.9150136011910526 0.33581356610625696 0.48285337812309126 0.0 0.612839751305354 0.5106400516930553 0.2762543410940264 0.519894147533998 1.0 8.743523511781795 -10.829834698429826 0.9073415930619929 1.0270350042687553 0.40210634946125884 0.11967307161024676 0.28316500010284923 0.4792337527812728 0.6490380618853966 0.20958480852502845 0.04343379345712083 1.479671474934959e-11 10.829834698429826 -0.6249286548074964 RS(ph)AHEEEEDDDDDDQGEDK ddPTM_A549_MK2206_60min_R1 1 RSAHEEEEDDDDDDQGEDK 19 1 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 RS(1)AHEEEEDDDDDDQGEDK 68.375 0.00060558 1967100.0 316.81 209.94 158.85 405.73 196.41 167.26 156.13 202.84 212.2 178.13 298.66 True False 370.27978273915323 220.62504927375846 181.37731860954855 505.133868213912 167.51834918275372 184.95934218179778 184.49680002054535 231.5931911714473 164.13703881376853 137.89030928334216 224.4944794033294 1.6493937121451627 0.982763807199824 0.807936654351682 2.2500948333182955 0.7462025330332881 0.8238926082876973 0.8218322361908786 1.0316208745399225 0.7311406465317929 0.6142258359752661 1.0 7.810536157523474 RS(ph)AHEEEEDDDDDDQGEDKKSPWQK ddPTM_A549_PD325901_60min_R1 1 RSAHEEEEDDDDDDQGEDKKSPWQK 25 3 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 RS(1)AHEEEEDDDDDDQGEDKKSPWQK 79.911 6.669400000000001e-07 7438700.0 1138.8 1194.0 1078.9 1365.6 1210.6 1571.1 1386.5 1079.2 1813.4 1836.0 1781.9 True False 1254.410137659749 1294.6225703433652 1152.1206419527473 1449.9500104973772 1125.5716323432746 1558.3054824965454 1439.2640162219118 1057.6745093839777 1737.1891042683696 1720.074646666279 1562.7375963947677 0.8027004281164479 0.8284324721757873 0.7372451041113282 0.9278269197864112 0.7202563213043354 0.9971638783705933 0.9209889232474414 0.6768087693186818 1.1116319900897382 1.10068040254134 1.0 10.609859836408855 -8.777743834739592 24.994267907841994 1.0527151201690126 0.8322060548833267 0.5649021624436072 0.09504599160947652 131.66152316513907 201832.64710201038 0.01621808710042434 0.017290292152652563 1.6682309155844992e-09 8.777743834739592 -0.22050906528568592 RS(ph)AS(ph)PERMD ddPTM_A549_PD325901_60min_R1 1 RSASPERMD 9 2 Q16629-4;Q16629;H7BZZ6;C9JAB2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 2 RS(1)AS(1)PERMD 47.138999999999996 0.016172 171320000.0 2149.3 1982.4 2113.0 2188.6 2687.9 1802.8 2605.1 2076.1 2375.1 1883.0 2279.1 True False 2367.4953537689667 2149.4638052334044 2256.4008865012092 2323.7848513287645 2499.1111767516027 1788.1185945164348 2704.238506065419 2034.6905568310563 2275.2828066327343 1764.1070586452104 1998.7851484052494 1.1844671527892312 1.0753851192802666 1.1288861578251674 1.162598618056983 1.2503150619993066 0.8946027020178247 1.3529410643375166 1.0179636157765402 1.1383328560591373 0.8825896370366373 1.0 10.964907688215897 -10.94820948360445 0.4956098324417595 0.9596848300437206 1.1379879927375218 0.26223295048841233 0.11774518461307341 2.526078780893297 0.7217450173380928 0.22493197493761055 0.02433556562209258 1.1266538792799204e-11 10.94820948360445 0.1783031626938012 RS(ph)ASADNLTLPR ddPTM_A549_PD325901_60min_R1 1 RSASADNLTLPR 12 1 Q8ND76;Q8ND76-3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 RS(0.625)AS(0.375)ADNLTLPR 78.191 0.00042186 7728100.0 1170.3 966.92 998.74 1007.6 1150.2 1071.9 1036.0 881.29 1144.9 1032.3 1094.7 True False 1289.1079944706746 1048.405741806035 1066.5205023115088 1069.8371635743677 1069.4139199745869 1063.1708017873123 1075.4255469209534 863.7119795913699 1096.7838344969973 967.1204018265796 960.0588398750501 1.342738529066041 1.0920223826515498 1.1108907683723994 1.114345412114121 1.1139045603848292 1.107401710842725 1.1201662879963878 0.8996448381265677 1.1424131406776503 1.0073553428792432 1.0 9.90697901789455 -2.3502653511786353 1.0828406069757266 1.0689376958858963 199.99999998026504 0.559465726220012 0.06940191825866028 688.8041525328265 1.424290548268894 0.010659068475318143 339545.9690176895 0.004464107546638865 2.3502653511786353 198.93106228437915 RS(ph)ASASHQADIK ddPTM_A549_MK2206_60min_R1 4 RSASASHQADIK 12 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 RS(0.873)AS(0.066)AS(0.062)HQADIK;RS(0.49)AS(0.49)AS(0.02)HQADIK;RS(0.333)AS(0.333)AS(0.333)HQADIK;RS(0.467)AS(0.467)AS(0.066)HQADIK 100.43 0.00010171 64382400.0 4095.12 4908.2300000000005 4834.9 3566.72 5407.209999999999 3639.96 3566.9 3852.9500000000003 6093.280000000001 6565.65 7201.35 True False 4786.276139928536 5158.037942254643 5520.561521846439 4440.5665601161445 4611.816571887775 4025.138151190104 4214.959559298554 4399.117461664506 4713.161808968705 5082.465104958039 5413.056047850951 0.8842096031554572 0.9528883308537784 1.0198604028935132 0.8203437246653125 0.851980199561895 0.7435980923914751 0.778665419688744 0.8126864792783753 0.8707025693628072 0.9389271162222382 1.0 12.402227610741244 -10.327816385180675 0.9114398505113774 0.9930008845409932 0.8598896383255696 0.23085043140022066 0.07506991809811793 0.5327160132938964 0.8537241294776753 0.040933202443384685 0.015452060039131195 4.7009281654884674e-11 10.327816385180675 -0.13311124621542358 RS(ph)ASASHQADIK ddPTM_A549_PD325901_60min_R1 6 RSASASHQADIK 12 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 RS(0.392)AS(0.392)AS(0.216)HQADIK;RS(0.46)AS(0.46)AS(0.081)HQADIK;RS(0.539)AS(0.314)AS(0.146)HQADIK;RS(0.333)AS(0.333)AS(0.333)HQADIK;RS(0.333)AS(0.333)AS(0.333)HQADIK;RS(0.333)AS(0.333)AS(0.333)HQADIK 92.8 0.00011131 113135500.0 7997.22 8127.16 7251.88 9870.260000000002 9983.72 10128.619999999999 8289.35 10349.390000000001 8612.77 9774.640000000001 10930.02 True False 8809.091887157794 8812.064295470504 7744.036185897012 10479.92354321313 9282.49794916422 10046.135876853263 8604.805750356365 10142.963297510607 8250.80522861447 9157.467562249498 9585.696831105417 0.9189829432715259 0.919293031141514 0.8078740984972267 1.09328760630171 0.9683696566578945 1.0480339670511725 0.8976713849778685 1.0581352066755199 0.860741308012241 0.9553262244361492 1.0 13.226667596914263 -6.224371064255885 24.999633157038968 0.9582508998665048 0.8857743709433051 0.2255994452171014 0.0736079943712049 910.2653627297915 613900.841036428 0.011136312582075526 0.02946300610950027 5.965253933005388e-07 6.224371064255885 -0.07247652892319967 RS(ph)ASPDDDLGSSNWEAADLGNEER ddPTM_A549_MK2206_60min_R1 1 RSASPDDDLGSSNWEAADLGNEER 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.5)AS(0.5)PDDDLGSSNWEAADLGNEER 157.96 7.1046e-34 3063500.0 478.38 528.36 275.19 272.6 592.86 542.3 652.12 523.12 698.19 606.85 940.05 True False 559.1188487319089 555.251267191974 314.2160800010178 339.3870122374789 505.65107935689326 599.6858260503941 770.6017628219944 597.2738619878103 540.0510797803255 469.76216352437075 706.6096409398638 0.7912697709420199 0.785796336508277 0.4446812805767524 0.48030339889795326 0.7156017269794467 0.8486805037824704 1.0905621975338669 0.845267071637141 0.7642849014372374 0.6648114267158011 1.0 9.464769623182804 -7.1904242788352475 3.331974958432242 0.8976696927850996 0.6229762578279034 0.37448294622299083 0.14542294933270355 0.18374877959718802 4.010959615136481 0.02181648650769526 0.03882007092045852 6.450237728136249e-08 7.1904242788352475 -0.2746934349571961 RS(ph)ASPDDDLGSSNWEAADLGNEERK ddPTM_A549_MK2206_60min_R1 3 RSASPDDDLGSSNWEAADLGNEERK 25 2 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.579)AS(0.421)PDDDLGSSNWEAADLGNEERK;RS(0.541)AS(0.458)PDDDLGSSNWEAADLGNEERK;RS(0.5)AS(0.5)PDDDLGSSNWEAADLGNEERK 135.32 1.5075e-24 15451900.0 2720.24 3068.1800000000003 2907.7999999999997 2065.95 3723.6000000000004 2735.29 2483.44 2478.07 4654.3 4548.8 4938.700000000001 True False 3179.3500085172614 3224.337256743644 3320.169764260908 2572.1078427440184 3175.8633726230946 3024.7365722614477 2934.6489018319544 2829.344011271094 3600.108481389834 3521.2229207211967 3712.284488814111 0.8564402911730788 0.8685587719527548 0.8943737405539024 0.6928638821982305 0.8555010754678514 0.8147911565979415 0.7905237086959971 0.7621571083241327 0.9697824862932013 0.9485326168647304 1.0 11.858091559479497 -8.827064992405079 6.909872335197344 0.9863891957440974 0.8175396357769402 0.6169433903856079 0.05445455064905991 0.08958347681210606 7.640808909156097 0.009255288303526524 0.009844341149685588 1.4891382106932756e-09 8.827064992405079 -0.16884955996715723 RS(ph)ASPDDDLGSSNWEAADLGNEERK ddPTM_A549_PD325901_60min_R1 3 RSASPDDDLGSSNWEAADLGNEERK 25 2 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.588)AS(0.412)PDDDLGSSNWEAADLGNEERK;RS(0.565)AS(0.409)PDDDLGS(0.013)S(0.013)NWEAADLGNEERK;RS(0.543)AS(0.406)PDDDLGS(0.022)S(0.029)NWEAADLGNEERK 203.02 7.066899999999999e-69 34774000.0 6383.799999999999 6187.0 5514.1 6800.9 5688.3 7817.200000000001 5890.700000000001 6262.7 8126.8 8086.2 9615.099999999999 True False 7031.878676494828 6708.400203278389 5888.319984976962 7220.976147035448 5288.773431569679 7753.539314984402 6114.8738120147245 6137.785535506896 7785.258857708274 7575.635952000479 8432.503655140763 0.833901645830647 0.7955407406421583 0.6982884592510347 0.8563264769690644 0.627188987738588 0.919482473068074 0.7251551925846926 0.7278722650496662 0.9232440537351081 0.898385137062122 1.0 13.041745323254117 -8.900253982852481 3.863141386633512 0.9678331917055526 0.7726221454787572 0.4609537485172921 0.08001954982344811 0.1120657326746194 3.022125700513729 0.0130386642350576 0.013671568473955004 1.2581893858892142e-09 8.900253982852481 -0.19521104622679541 RS(ph)ASPDYNR ddPTM_A549_MK2206_60min_R1 2 RSASPDYNR 9 1 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.5)AS(0.5)PDYNR;RS(0.5)AS(0.5)PDYNR 47.288000000000004 0.014525999999999999 30176300.0 618.59 703.01 531.52 629.18 1059.74 510.51 584.01 787.54 920.25 925.6700000000001 1057.78 True False 722.9928689265265 738.7902062015097 606.8975284063409 783.3291282449636 903.8536498290895 564.5318293508882 690.1170574521152 899.1762067400985 711.8148443372788 716.5605040942647 795.1040327571611 0.9093060016554354 0.9291742662147323 0.7632932338449077 0.985190737278283 1.1367740730666656 0.7100100189320838 0.8679581904005877 1.1308912666711664 0.8952474330546877 0.9012160353525902 1.0 9.63499982718249 -14.999999999999998 0.22156704459413942 1.398367910548884 0.9092450195127999 0.0 0.12616210439488273 120.22322811912754 1.4828128041205804 21.115438221680105 0.08219913502713234 1.000000000000004e-15 14.999999999999998 -0.4891228910360841 RS(ph)ASPERMD ddPTM_A549_PD325901_60min_R1 1 RSASPERMD 9 2 Q16629-4;Q16629;H7BZZ6;C9JAB2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 1 RS(0.5)AS(0.5)PERMD 42.809 0.036308 27301000.0 484.6 568.0 343.13 480.22 677.13 409.63 382.84 471.57 568.26 474.51 465.48 True False 533.7962352563352 615.867353396173 366.4168652083105 509.88209874124976 629.5707247716853 406.29410909239357 397.40918569808616 462.16416641049165 544.3780083773812 444.5493576196169 408.22891092083535 1.3075904743058488 1.5086323798257477 0.8975769608815553 1.2490102614024003 1.5422002409177067 0.995260497782782 0.9734959358994362 1.1321201268376495 1.3335116495042856 1.0889707850844128 1.0 8.673234547954117 -7.296009428066061 24.97699537207301 1.1335720012659432 1.2872363769937605 0.22935615137620702 0.1839703484244518 1038.9583093226984 750649.3974728967 0.030554067728159832 0.04884534414358409 5.0581368121297473e-08 7.296009428066061 0.15366437572781733 RS(ph)DLTTHQQDHLGK ddPTM_A549_PD325901_60min_R1 1 RSDLTTHQQDHLGK 14 1 A0A0A0MRR1;Q5VV50;Q5VV52-3;Q5VV52 A0A0A0MRR1 ZNF691 Zinc finger protein 691 1 RS(0.778)DLT(0.101)T(0.122)HQQDHLGK 42.743 0.052684 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RS(ph)DSASSEPVGIYQGFEK ddPTM_A549_PD325901_60min_R1 1 RSDSASSEPVGIYQGFEK 18 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 RS(0.572)DS(0.387)AS(0.025)S(0.017)EPVGIYQGFEK 145.08 3.7649e-17 17382000.0 3472.4 4715.9 3902.7 4094.8 4513.2 3962.4 4413.1 5182.5 4726.7 4913.2 4024.0 True False 3824.915491754227 5113.32544345249 4167.560690841586 4347.72649603446 4196.208401694754 3930.1315281295347 4581.0429354409835 5079.130971907398 4528.053236542017 4602.979713508044 3529.073510237692 1.0838299289199587 1.4489144044800852 1.1809220405162062 1.2319739114024943 1.1890396699081875 1.1136439965697484 1.2980865720568224 1.4392250422591242 1.2830713849984499 1.3043025882444772 1.0 11.785073766281801 -10.64911035518355 0.9737305013625803 1.0033937780308484 1.2552005268722035 0.0 0.14106901005980269 0.4088118712058145 0.7044335281920895 0.06890681561589877 0.01950728844370497 2.2433118208833643e-11 10.64911035518355 0.2518067488413551 RS(ph)DSIKFQHR ddPTM_A549_MK2206_60min_R1 1 RSDSIKFQHR 10 2 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 RS(0.614)DS(0.386)IKFQHR 75.479 0.00031659 20061000.0 1049.5 1476.1 1272.6 844.78 1304.8 1125.7 835.26 758.53 1443.2 1767.2 1524.5 True False 1226.629942188508 1551.2271850671373 1453.073815942785 1051.7511379236153 1112.8656484581081 1244.8208268208164 987.0159302194375 866.053950400699 1116.3175043168276 1367.9882926262958 1145.9245759404523 1.0704281659914845 1.35369047635099 1.2680361748505633 0.9178188163566092 0.9711508696327479 1.0863025830467077 0.8613271335152232 0.7557687203714386 0.9741631585138782 1.1937856307022627 1.0 10.162296374570493 -6.258791179884337 24.98135622430736 0.964046257942024 1.2430155088696784 0.46769321622870474 0.1235466047845986 120.54103274354614 1137094.5223460796 0.014302331343803217 0.03603239951539048 5.510726027957452e-07 6.258791179884337 0.27896925092765434 RS(ph)DSIKFQHR ddPTM_A549_PD325901_60min_R1 2 RSDSIKFQHR 10 2 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 RS(0.609)DS(0.391)IKFQHR;RS(0.5)DS(0.5)IKFQHR 73.46600000000001 0.00034594 84574500.0 3002.48 3387.29 3978.0499999999997 3678.7400000000002 3822.4 4394.57 3290.12 3875.66 4069.36 4143.79 4605.3099999999995 True False 3307.289559291047 3672.748815995289 4248.024394957944 3905.9674147752803 3553.9278105641292 4358.782078935038 3415.3273170227453 3798.3569209035463 3898.3389507805923 3882.1503922163733 4038.8860654653945 0.818861811322215 0.9093469725227528 1.0517811906804684 0.9670902698081437 0.8799277209010885 1.0792040201888642 0.8456112060762483 0.9404466626037067 0.9652015153666863 0.9611933412558493 1.0 11.979741733722035 -6.370154545560026 0.010218758140902458 1.8726749862573648 5.4686404972950056e-05 0.06788468120043534 0.07413595873508068 5417.715097849207 11.904602431515865 1034.0390065337522 1149.1577752477829 4.264277456505477e-07 6.370154545560026 -1.872620299852392 RS(ph)DSPENK ddPTM_A549_PD325901_60min_R1 1 RSDSPENK 8 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;A0A494C0S5;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 RS(0.608)DS(0.392)PENK 72.848 0.0043905 9099500.0 2159.4 2038.9 1897.5 1529.3 1939.9 1631.8 1158.5 1388.2 1811.0 2726.1 2225.9 True False 2378.62069833374 2210.7252585201722 2026.2757605944355 1623.7613877077026 1803.6481162916905 1618.5111618215653 1202.5873514555242 1360.5112619781676 1734.889967922144 2553.973580760864 1952.128411142664 1.218475528944037 1.1324691787186993 1.0379828237878932 0.831790254390717 0.9239392787874741 0.8291007664163762 0.6160390600286374 0.6969373808671748 0.8887171346000948 1.3083020390374394 1.0 10.930832241264442 -5.899654566090343 2.122305677987628 0.8884363319133921 1.1975055166179942 0.31165931872654806 0.16827074365256878 0.24791971534760093 2.1458930571364405 0.019296399119921554 0.08960707267114683 1.2599271480330256e-06 5.899654566090343 0.3090691847046021 RS(ph)DTMAGGGGSSDGSGR ddPTM_A549_PD325901_60min_R1 1 RSDTMAGGGGSSDGSGR 17 1 Q15554;Q15554-4 Q15554 TERF2 Telomeric repeat-binding factor 2 1 RS(0.837)DT(0.161)MAGGGGS(0.001)S(0.001)DGSGR 40.085 0.02822 4529800.0 245.12 269.83 230.24 255.45 354.55 163.48 241.16 204.09 323.8 330.23 413.52 True False 270.0044019521932 292.5695210684673 245.86547094559307 271.2285663309572 329.6476311310987 162.14867308162118 250.33747576781556 200.01926484449226 310.19181204483164 309.3792214425956 362.659661519257 0.7445118125933511 0.8067330120003766 0.6779509745186749 0.7478873310439992 0.908972422656923 0.44710975685122123 0.690282108352221 0.5515343614632238 0.8553248264374742 0.8530841840709317 1.0 8.502472473647654 -9.129355693121406 2.2445099431764115 0.9487711573913273 0.7009180850385406 0.3428714936568342 0.12282510803876225 0.1825741701398888 1.9009734053558556 0.023925393555889306 0.022886428734404708 7.424108441934177e-10 9.129355693121406 -0.24785307235278675 RS(ph)DVQEESEGSDTDDNKDSAAFEDNEVQDEFLEK ddPTM_A549_MK2206_60min_R1 1 RSDVQEESEGSDTDDNKDSAAFEDNEVQDEFLEK 34 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 RS(0.344)DVQEES(0.302)EGS(0.302)DT(0.044)DDNKDS(0.007)AAFEDNEVQDEFLEK 73.422 4.4463999999999995e-06 4288500.0 575.78 792.12 601.53 921.51 830.33 672.46 453.78 596.61 1159.0 1183.4 1025.0 True False 672.9575875305376 832.4355245819262 686.8359991388216 1147.2799913681558 708.1895569314997 743.6192708571785 536.225952176539 681.1812945414968 896.4883505426852 916.0691180930056 770.464211439137 0.8734443177750353 1.0804337336150034 0.8914573693901919 1.4890762923629783 0.9191725539187401 0.9651574464025847 0.6959777549886861 0.884118021872982 1.1635691018900798 1.1889833485995354 1.0 9.589584133953554 -8.76537026669035 24.999752065332995 1.077240957302316 0.9812595903093824 0.0876313317803834 0.19264741445283481 266.7072658714594 1696207.8035152084 0.033610354826012497 0.03643948537540315 1.7164443732153885e-09 8.76537026669035 -0.09598136699293369 RS(ph)EDEPPAASASAAPPPQRDEEEPDGVPEK ddPTM_A549_MK2206_60min_R1 2 RSEDEPPAASASAAPPPQRDEEEPDGVPEK 30 2 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RS(1)EDEPPAASASAAPPPQRDEEEPDGVPEK;RS(1)EDEPPAASASAAPPPQRDEEEPDGVPEK 153.06 1.7672999999999998e-37 22787000.0 1596.49 1740.52 1259.27 1101.9099999999999 1470.97 1291.8200000000002 1147.85 1294.73 1645.92 1413.28 1618.24 True False 1865.9384815669657 1829.1050336380013 1437.8534215010782 1371.8779994666193 1254.592261582176 1428.5195349592855 1356.3994869889395 1478.2619424443308 1273.1217479941472 1094.0190664344116 1216.3863468480674 1.5340015007584022 1.503720457219556 1.1820696814189686 1.1278308105163017 1.0314093584107622 1.1743962258873615 1.1151058136287684 1.21528981830061 1.0466425830025914 0.8994009750843248 1.0 10.248385812913305 -2.000000000000068 0.38441720789736017 1.031416499743598 9.410707862427927 0.772616956782797 0.08947320902112484 17.45779092405407 0.20730991881403021 0.019202561632411182 110.86150723453137 0.009999999999998435 2.000000000000068 8.379291362684329 RS(ph)EDEPPAASASAAPPPQRDEEEPDGVPEK ddPTM_A549_PD325901_60min_R1 1 RSEDEPPAASASAAPPPQRDEEEPDGVPEK 30 2 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RS(1)EDEPPAASASAAPPPQRDEEEPDGVPEK 114.03 3.709199999999999e-21 5531200.0 632.08 764.07 694.73 798.81 690.61 750.0 867.07 901.41 1118.8 1171.7 1166.9 True False 696.2482962872974 828.4608604038979 741.8785555508681 848.1506794708619 642.1039360751603 743.8922486617074 900.0668233289093 883.4306704075349 1071.7807267318033 1097.7186620364266 1023.3786975885591 0.6803427684472071 0.809534986761053 0.7249306217717795 0.8287749993911382 0.6274353155759285 0.7268983128284571 0.8795051386644884 0.8632490323369139 1.047296303174276 1.0726416962000858 1.0 9.999124392632933 -8.298382713584797 1.479229193449661 1.0222992712851713 0.7379147959140916 0.7972917644793439 0.06403562594413142 0.11418242509616079 0.485465781764765 0.010967749576491246 0.014040826594596417 5.030571040903746e-09 8.298382713584797 -0.2843844753710797 RS(ph)EEHS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 RSEEHSPPR 9 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 RS(1)EEHS(1)PPR;RS(1)EEHS(1)PPR 66.393 0.0013366 29462000.0 1445.89 1224.83 1081.32 1053.82 1166.87 910.5 1210.19 1302.94 1219.46 1513.0300000000002 1341.77 True False 1592.6756883920393 1328.0507226412585 1154.7048777053888 1118.9120680011317 1084.9130766829655 903.0851898753125 1256.2444426913785 1276.951839563343 1168.2103369863826 1417.4970275846847 1176.740796180823 1.3534634760358066 1.1285839047575474 0.981273770275533 0.9508568680822679 0.9219643613989679 0.7674461468543669 1.0675625819794714 1.0851598276423833 0.9927507746632678 1.2045958057927875 1.0 10.200580853766406 -5.377778218594067 2.1415253453243683 0.9827862096198523 1.405082448024724 0.5031470573828224 0.10399282831517354 0.23878794388306446 1.458726091269872 0.01139805912605589 0.1745651173338205 4.19007485278724e-06 5.377778218594067 0.4222962384048716 RS(ph)EEKEAGEI ddPTM_A549_MK2206_60min_R1 6 RSEEKEAGEI 10 2 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI 112.08 0.00023844 1924508000.0 22148.289999999997 24098.090000000004 19955.690000000002 21012.12 25874.09 21125.579999999998 20758.719999999998 22959.420000000002 28810.71 31958.38 31467.400000000005 True False 25886.379878298525 25324.57984973547 22785.706913461647 26160.090343269923 22068.04563619977 23361.07485357492 24530.310718775974 26213.988095274846 22285.130186249902 24738.95976194113 23653.176123941368 1.0944145404682775 1.0706629721537622 0.9633254660628142 1.1059863675893866 0.9329844550501125 0.9876506533906544 1.0370831633873805 1.108265036285823 0.9421622732387829 1.0459043484185935 1.0 14.529746299714569 -2.000000000030689 0.32226269488952225 0.9816441569868356 2.0677101783106955 0.026651953540583917 0.06104555216424193 54.07328845574396 0.6744588334676799 0.01741283312546942 35.270841054298145 0.009999999999293364 2.000000000030689 1.0860660213238598 RS(ph)EEKEAGEI ddPTM_A549_PD325901_60min_R1 7 RSEEKEAGEI 10 2 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI;RS(1)EEKEAGEI 144.97 1.3698e-08 1758023000.0 65047.07000000001 67850.51 70177.42 64794.88 76974.48 63438.56 68242.20000000001 69002.26 71497.19 69395.28 76830.9 True False 71650.60066127795 73568.51059908548 74940.08173230835 68797.11257775058 71568.05807234008 62921.937400347546 70839.19426456484 67625.95579307433 68492.4117424756 65013.650177727446 67381.18637120306 1.0633621121859547 1.0918256943977869 1.112181096359202 1.0210136728484889 1.0621371027525626 0.9338205631125355 1.0513200802715406 1.003632607780499 1.0164916266856863 0.964863542466693 1.0 16.040058209564233 -6.559313447039148 1.8659461473404593 1.0074710847782533 1.08840749034634 0.5123831286428971 0.035556574105309616 0.189059923632694 1.3074134390889205 0.004390431127503666 0.011808286101295608 2.758586159783503e-07 6.559313447039148 0.08093640556808679 RS(ph)EQKDPLEEPK ddPTM_A549_MK2206_60min_R1 1 RSEQKDPLEEPK 12 2 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 RS(1)EQKDPLEEPK 77.146 0.00036013 5484300.0 3590.0 4166.0 2747.2 3177.6 5048.7 3420.2 3671.5 3728.3 5239.8 5535.2 5892.4 True False 4195.904232926861 4378.031605575296 3136.794269336806 3956.1121426478853 4306.042917972447 3782.123293854985 4338.5640253342235 4256.79794243989 4052.9936662412088 4284.794475636646 4429.154458033138 0.9473375274408794 0.9884576496615238 0.7082151455900608 0.8931980539700307 0.9722042793433395 0.8539154210337742 0.9795467885445694 0.9610859099120722 0.9150716473412462 0.9674068755641007 1.0 12.112815593909003 -12.878900626651328 0.18100552187640961 1.1626188886680757 0.8846438828152056 0.13376156875777434 0.07509033650050251 31.78246572912034 0.7047144896410857 2.1146456777802936 0.09901007345264048 1.3215980018202798e-13 12.878900626651328 -0.27797500585287016 RS(ph)EQKDPLEEPK ddPTM_A549_PD325901_60min_R1 2 RSEQKDPLEEPK 12 2 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 RS(1)EQKDPLEEPK;RS(1)EQKDPLEEPK 74.46 0.00027196 15568300.0 5705.4 5628.1 5161.3 5098.4 5506.6 5067.7 4956.3 5473.9 5466.4 5284.8 6409.1 True False 6284.608007906513 6102.399738818671 5511.576855418212 5413.316588693487 5119.835412738707 5026.430331390582 5144.914708691424 5364.718770308522 5236.666217918061 4951.116826090392 5620.821330632305 1.1180942496173485 1.0856775869323338 0.9805643216910787 0.9630828432834254 0.9108696241306713 0.8942519314744243 0.9153314802327394 0.9544368082066446 0.9316549859678551 0.8808529100734509 1.0 12.456565241274351 -5.753458301418273 2.4534378582976064 0.9529410081102881 1.1172236697731148 0.7485236432222601 0.036458588630584446 0.12549641219920196 1.4512166952842895 0.005467849860149138 0.028127936010943475 1.7641751427968024e-06 5.753458301418273 0.16428266166282668 RS(ph)ESPPAELPSLR ddPTM_A549_PD325901_60min_R1 1 RSESPPAELPSLR 13 1 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.624)ES(0.376)PPAELPSLR 82.069 0.00044955 23399000.0 3766.3 3713.0 3190.2 3249.6 3981.5 3403.0 2946.2 4021.1 3334.9 4009.2 4174.0 True False 4148.652003396481 4025.907540774632 3406.706156231024 3450.320411622933 3701.853175429335 3375.287096261056 3058.3192532224994 3940.8960060080744 3194.745750427143 3756.0584277856474 3660.6244611660345 1.133318112089267 1.0997870946565882 0.9306352488137697 0.9425496792216396 1.0112627544017907 0.9220522706079255 0.8354638083384056 1.076563861662216 0.8727324488810051 1.0260704061921757 1.0 11.837874061636109 -5.71696784224688 5.230961517559369 0.9441192424606568 1.1226938621720528 0.44542332721598876 0.06729435993145363 0.11268576845418989 6.9304701991330155 0.009014603966103001 0.03565735329021052 1.9188108156047643e-06 5.71696784224688 0.178574619711396 RS(ph)ET(ph)PPHWR ddPTM_A549_PD325901_60min_R1 1 RSETPPHWR 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 RS(1)ET(1)PPHWR 50.207 0.011989 5042200.0 539.89 367.71 376.5 332.37 313.23 361.9 259.16 278.03 400.71 448.02 453.79 True False 594.6992353539882 398.6982121783574 402.05155407842165 352.89974003296203 291.2298053848374 358.9528063875625 269.0224756177935 272.4844735396843 383.8695522065612 419.7319407404286 397.97670681181995 1.494306639496836 1.0018129336571413 1.0102389089533534 0.8867346605785845 0.7317760069876226 0.9019442601631718 0.6759754302530037 0.6846744266079029 0.9645528133586743 1.054664591058329 1.0 8.636540183482122 -4.926754838653735 1.5372578397241903 0.9132279606367233 2.2543393594866714 0.6492352786814848 0.12821114224741875 1.4806333384952846 1.6438561452663256 0.020299473072668165 3.845519481064924 1.183709576967358e-05 4.926754838653735 1.3411113988499481 RS(ph)EVLAEESIVCLQK ddPTM_A549_PD325901_60min_R1 2 RSEVLAEESIVCLQK 15 1 O43663-2;O43663-4;O43663;H0YLA0;H0YM42;O43663-3 O43663-2;O43663-3 PRC1 Protein regulator of cytokinesis 1 1 RS(0.999)EVLAEES(0.001)IVCLQK;RS(0.996)EVLAEES(0.004)IVCLQK 90.367 1.3476e-05 4831100.0 2414.84 2544.98 2585.11 1909.6999999999998 2509.3 2049.23 2137.8999999999996 2353.92 2244.66 2595.3 2668.75 True False 2659.9927790887514 2759.454396208087 2760.551110129265 2027.6578317566202 2333.05542461505 2032.5417503000403 2219.2589544037673 2306.9692189854823 2150.324746215417 2431.4323150833297 2340.5106686001113 1.1365010272222884 1.1789967177797789 1.179465296682619 0.8663313775747016 0.9968146934405899 0.868418066863899 0.9481943339019829 0.9856691746529441 0.9187416981532295 1.03884692674253 1.0 11.19260762587149 -6.249077086084008 24.951617606408693 0.9523701747014959 1.16638860753809 0.7679853209735965 0.051920525968666746 233.61045909860607 471510.2490449312 0.006519529964947035 0.017114056891175226 5.635376205602074e-07 6.249077086084008 0.21401843283659416 RS(ph)FSADNFIGIQR ddPTM_A549_MK2206_60min_R1 4 RSFSADNFIGIQR 13 1 Q8N7R7-3;Q8N7R7;Q8N7R7-2 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 RS(0.5)FS(0.5)ADNFIGIQR;RS(0.598)FS(0.402)ADNFIGIQR;RS(0.582)FS(0.418)ADNFIGIQR;RS(0.5)FS(0.5)ADNFIGIQR 99.566 6.5589e-05 36340700.0 1673.49 1771.06 1856.36 1731.97 2182.1499999999996 1811.51 1821.7699999999998 1982.43 2872.69 2364.7200000000003 2817.09 True False 1955.9341990977086 1861.1993891911138 2119.6197618761203 2156.302727751088 1861.1586256766248 2003.2027858169808 2152.7620276271628 2263.4455234372526 2222.0303017432834 1830.528109630634 2117.528805271295 0.9236871745162007 0.878948793781655 1.000987451315713 1.0183109303558329 0.8789295432692712 0.9460096981114423 1.0166388397022792 1.0689089649230359 1.049350684728277 0.8644643251481574 1.0 11.048165879692709 -7.780388133663868 4.958495630206287 1.027938610269885 0.9413486381590808 0.1058060918296051 0.06553908495473577 0.13281673528129562 8.467684093087332 0.007187440022845986 0.010268924319718436 1.6581043792882894e-08 7.780388133663868 -0.08658997211080433 RS(ph)FSADNFIGIQR ddPTM_A549_PD325901_60min_R1 2 RSFSADNFIGIQR 13 1 Q8N7R7-3;Q8N7R7;Q8N7R7-2 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 RS(0.527)FS(0.473)ADNFIGIQR;RS(0.949)FS(0.051)ADNFIGIQR 135.02 1.8828e-08 45337000.0 3747.22 4000.91 3560.63 3908.0 4705.8 4015.54 4672.7699999999995 4577.37 4100.83 4150.6 4384.7 True False 4127.635015842434 4338.080726894867 3802.27576360757 4149.388284288039 4375.280842128685 3982.838773588043 4850.594819387857 4486.070764472699 3928.4863761204674 3888.530407654175 3845.4096969033817 1.0733927828720882 1.1281192561583808 0.9887830070927042 1.0790497271667683 1.1377931578141067 1.0357384745753695 1.2613987069554453 1.1666041119325274 1.021604116535095 1.011213554380309 1.0 11.908921598376613 -8.881264599649958 7.314235358546612 1.0095038511325989 1.107993145527474 0.2966694527036473 0.06731830666974051 0.20648387268069568 12.476008199076055 0.011930179980686084 0.01266567953548467 1.314423758146877e-09 8.881264599649958 0.0984892943948752 RS(ph)FSKEVEER ddPTM_A549_PD325901_60min_R1 1 RSFSKEVEER 10 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 RS(0.688)FS(0.312)KEVEER 74.76899999999999 0.00052255 58940000.0 4863.2 5644.5 4765.5 5934.5 5369.1 5918.1 4989.4 5751.4 4708.2 6121.7 5678.7 True False 5356.90848390138 6120.181824374475 5088.915487279465 6301.060586772617 4991.992938389457 5869.904955739798 5179.27434730444 5636.6838151139855 4510.330727206534 5735.17481726414 4980.255900245226 1.0756291626776864 1.2288890263797727 1.021818073048995 1.265208196723858 1.002356713867585 1.1786352093776478 1.039961490141383 1.1318060613785803 0.9056423640770039 1.151582354830751 1.0 12.282004158788707 -8.753443746889749 24.99927247694293 0.9554422261611225 1.118992700002746 0.07645932949560574 0.10058337338302613 107.8808955278257 337301.77546753443 0.012862108369170322 0.01445795137080023 1.7642342666603654e-09 8.753443746889749 0.16355047384162347 RS(ph)FSLEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_A549_MK2206_60min_R1 1 RSFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 33 2 Q12802;A0A087WTD7 Q12802 AKAP13 A-kinase anchor protein 13 1 RS(0.5)FS(0.5)LEGLTGGAGVGNKPSSSLEVSSANAEELR 83.164 1.1879e-06 2129000.0 669.12 602.29 1106.3 747.2 1105.8 1011.3 900.73 988.15 1544.9 1205.8 1444.5 True False 782.0510975866364 632.9439884114129 1263.1899753084267 930.2640335430826 943.1382848444019 1118.3150947533904 1064.3809817620302 1128.2232885824578 1194.9826166983557 933.40894253553 1085.7907838281292 0.7202594728511049 0.5829336533690842 1.1633824804211805 0.8567617697612867 0.8686187973701683 1.0299544916107979 0.9802818347834789 1.0390798166519024 1.1005643393704754 0.8596581923864258 1.0 10.08453042812536 -4.534253077523762 0.48064124226929694 1.043697601659453 7.813221044508775e-10 0.34607023095533107 0.1316015420766438 4.50162223927564 0.4179014626967635 0.022236566828712216 3.1096844547792335 2.9224488755109223e-05 4.534253077523762 -1.043697600878131 RS(ph)FSLEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_A549_PD325901_60min_R1 1 RSFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 33 2 Q12802;A0A087WTD7 Q12802 AKAP13 A-kinase anchor protein 13 1 RS(0.58)FS(0.42)LEGLTGGAGVGNKPSSSLEVSSANAEELR 167.34 2.4963999999999997e-53 13814000.0 2106.9 1984.1 2130.0 2017.1 2520.0 2601.5 2351.3 2719.1 2107.9 2517.5 2761.7 True False 2320.790936982197 2151.3070701995543 2274.554608730514 2141.6916858335244 2343.003893528048 2580.314246524576 2440.7800081807286 2664.8654174073145 2019.312293419705 2358.544620360763 2422.0284078587065 0.9582013693365335 0.8882253664817688 0.9391114494571213 0.8842553947279977 0.967372589820066 1.0653525937814283 1.0077421058568838 1.10026183374261 0.8337277493805123 0.9737889996285928 1.0 11.242000071096694 -4.86984547107481 18.906726734540932 0.9450694927323353 4.759216650096114 0.0 0.07756653111031518 5160.442527286524 765063.0641538549 0.012045637709895926 17583.88080760157 1.3494429505709868e-05 4.86984547107481 3.814147157363779 RS(ph)FSSQRPVDR ddPTM_A549_MK2206_60min_R1 2 RSFSSQRPVDR 11 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 RS(0.831)FS(0.136)S(0.033)QRPVDR;RS(0.769)FS(0.185)S(0.045)QRPVDR 78.505 0.00021497 31393000.0 1082.44 893.61 1255.9 906.01 1385.01 1179.31 1087.56 856.61 1463.79 1971.83 1947.6599999999999 True False 1265.1294088828292 939.0909320830873 1434.005504826767 1127.9824906723347 1181.276863711652 1304.1038014373776 1285.1555743953395 978.0370907581018 1132.2439021923008 1526.39223350459 1464.0022693185842 0.8641580927819738 0.6414545603950358 0.9795104385283644 0.770478649051105 0.8068818528959479 0.8907799043538157 0.8778371463819599 0.6680570865599317 0.7733894447576919 1.0426160296971705 1.0 10.515702074576481 -10.734526249044489 0.9990894566306119 0.9995280187537395 0.8067401329787771 0.42394424325818914 0.09422858953558072 0.4427150474000215 0.7885551749344301 0.059741266761528966 0.015566399245691543 1.8427811067009353e-11 10.734526249044489 -0.19278788577496242 RS(ph)FSSQRPVDR ddPTM_A549_PD325901_60min_R1 2 RSFSSQRPVDR 11 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 RS(0.494)FS(0.494)S(0.012)QRPVDR;RS(0.48)FS(0.48)S(0.039)QRPVDR 49.188 0.009475 86416000.0 5098.7 5970.5 6547.4 6755.299999999999 6615.5 7026.5 6348.6 6852.8 6272.1 7597.299999999999 7400.0 True False 5616.316270535445 6473.654988471575 6991.745936714631 7172.559538600563 6150.850102236032 6969.27851362865 6590.199447087224 6716.115528082401 6008.5054488152855 7117.6051814366665 6489.846912464943 0.8654004241222206 0.9975050376053912 1.0773360344272065 1.105197030892107 0.9477650528893363 1.0738741002107262 1.0154630049022475 1.0348650158731585 0.9258316151148107 1.0967292876764163 1.0 12.66396873187995 -8.745350915457932 24.873854406181433 0.9649760370727462 1.0189785821216075 0.0 0.07589112378477243 361.20157779583616 558441.7922146867 0.011176031448509103 0.012652717867143637 1.7974179916488656e-09 8.745350915457932 0.05400254504886137 RS(ph)FTFGAYGGVDK ddPTM_A549_PD325901_60min_R1 1 RSFTFGAYGGVDK 13 1 P47736-4 P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 RS(0.5)FT(0.5)FGAY(0.001)GGVDK 52.172 0.010301000000000001 2011000.0 670.03 452.16 785.95 801.08 588.82 595.24 724.28 861.6 706.43 637.73 920.66 True False 738.0509523499841 490.26511005565806 839.2892933012894 850.5608922153184 547.4633145187241 590.3925627911933 751.8428717412237 844.4147120878761 676.741203776499 597.4636189643171 807.4246565445911 0.9140802753144859 0.6071961093605549 1.0394645326946843 1.0534244716470893 0.6780364088231058 0.7312045254077376 0.9311616454205992 1.0458123928263294 0.838147805236271 0.7399620684376776 1.0 9.657183833233558 -7.935010450069731 24.99984535007101 0.9333594737547671 0.8379457993999121 0.047702023780846314 0.1497275968511608 116.26813555058853 44724.423663199224 0.02242171805243587 0.030980054401443115 1.1614206671970247e-08 7.935010450069731 -0.09541367435485504 RS(ph)GKNSQEDSEDSEDKDVK ddPTM_A549_MK2206_60min_R1 1 RSGKNSQEDSEDSEDKDVK 19 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 RS(0.583)GKNS(0.417)QEDSEDSEDKDVK 126.31 1.3717e-15 19610000.0 1439.1 1778.2 1879.6 1627.4 1827.6 1386.9 1598.5 1537.9 1962.1 2440.9 2654.7 True False 1681.984897383021 1868.7027846937106 2146.15554333338 2026.1130730567622 1558.7624610070811 1533.6608374502878 1888.9267586808548 1755.9020346212224 1517.6874828298546 1889.4989947213255 1995.4647240072934 0.8429038494878817 0.9364749785909422 1.0755166540972316 1.0153590031839403 0.7811526018243878 0.7685732646630752 0.9466099480262978 0.879946417241102 0.7605684352976352 0.9468967163332422 1.0 10.9625090596528 -6.742334263640723 24.99743913910396 0.8733501458535001 0.9730539362412657 0.21418634059979202 0.09026401471351941 366.06039137276 478956.86463454826 0.015665481207833818 0.032569571892968815 1.8099464940025013e-07 6.742334263640723 0.09970379038776556 RS(ph)GKNSQEDSEDSEDKDVK ddPTM_A549_PD325901_60min_R1 1 RSGKNSQEDSEDSEDKDVK 19 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 RS(0.5)GKNS(0.5)QEDSEDSEDKDVK 129.32 5.5262e-17 31422000.0 2137.6 1994.9 2285.5 2489.3 2312.6 2934.8 3058.7 2683.4 2114.0 2297.0 2560.2 True False 2354.6075783820515 2163.0172241021596 2440.6077738279764 2643.058407389514 2150.170954036889 2910.899961829838 3175.1005022848617 2629.8774819134223 2025.155931633026 2151.967027991529 2245.311630444966 1.0486774069376845 0.9633483364950559 1.0869795269106175 1.1771454668257895 0.9576269613901112 1.2964347230735935 1.4141023719080075 1.171275045411957 0.9019487113384299 0.958426883294174 1.0 11.13269997751118 -8.757366627715925 24.980269219467004 0.9536979991679372 1.1414135749896086 0.29253497429913433 0.12878850938355518 99.92302668046719 612877.9908320245 0.023823451265697595 0.026535051517821293 1.7483701062472746e-09 8.757366627715925 0.18771557582167142 RS(ph)GPTDDGEEEMEEDTVTNGS ddPTM_A549_MK2206_60min_R1 1 RSGPTDDGEEEMEEDTVTNGS 21 1 P09661 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 RS(0.821)GPT(0.174)DDGEEEMEEDT(0.004)VT(0.001)NGS(0.001) 43.598 0.021445 2471200.0 307.94 263.58 154.46 195.45 298.52 202.68 0.0 0.0 471.29 370.19 450.29 True False 359.91274358983225 276.9950961587941 176.3647505976133 243.33525877408383 254.60810344705263 224.12746307190463 0.0 0.0 364.54356749548083 286.563821891879 338.4705656282232 1.0633501998078059 0.8183727753244167 0.5210637748374631 0.7189259081434094 0.7522311518417667 0.6621771162166187 0.0 0.0 1.077031814624307 0.8466432564379655 1.0 8.402886568128698 RS(ph)GSLER ddPTM_A549_MK2206_60min_R1 1 RSGSLER 7 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.5)GS(0.5)LER 53.756 0.035463 20866000.0 849.9 762.67 413.6 502.62 554.17 378.11 593.25 577.7 453.2 820.24 984.24 True False 993.3423419399836 801.4866453730461 472.25469925658984 625.7619225634692 472.65232710455984 418.121349230895 701.0358458476175 659.5907441320506 350.5509236116867 634.9472143185797 739.8260443579082 1.3426701445771634 1.0833447287850657 0.6383320820591787 0.8458230516966528 0.63886954333268 0.5651617058085333 0.9475684874760572 0.8915484243387329 0.4738288497479543 0.8582385266926464 1.0 9.531042278834393 -5.5565994261304565 3.556534301140858 0.750276547131294 1.3099062905851355 0.5599816839705778 0.16033327839881747 0.14993680502659357 3.8131608135251893 0.02814654301972144 0.15251403818592216 2.7758792715328645e-06 5.5565994261304565 0.5596297434538415 RS(ph)GSLER ddPTM_A549_PD325901_60min_R1 1 RSGSLER 7 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.557)GS(0.443)LER 62.582 0.021838999999999997 31467000.0 1869.4 1423.6 1638.4 1431.3 1615.2 1395.2 1439.2 1793.8 1712.7 1931.2 2084.7 True False 2059.1801118204567 1543.571768124635 1749.5916764995654 1519.7081502818505 1501.7539241375007 1383.8379537770852 1493.9695435604579 1758.0212517911223 1640.7211750746862 1809.2637024193457 1828.295116002117 1.1262843147134853 0.8442683867689376 0.9569525516894394 0.8312159984351731 0.8213957970972131 0.7569007550614071 0.8171380705907481 0.9615631723806927 0.8974049980849954 0.9895906227522027 1.0 10.836283247852638 -10.21587807685639 0.692644792322095 0.998703226609128 0.8807491795927124 0.15009721122380892 0.094944757643353 0.9775024440721896 0.8831790239579542 0.059735642509709606 0.01984265444561545 6.083057521008831e-11 10.21587807685639 -0.11795404701641565 RS(ph)GSPLEKDSDGLR ddPTM_A549_MK2206_60min_R1 1 RSGSPLEKDSDGLR 14 2 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RS(0.61)GS(0.389)PLEKDS(0.001)DGLR 53.778999999999996 0.0063164 20680000.0 2701.6 2285.6 2939.9 2573.5 2907.2 1884.8 2432.2 1892.9 3877.0 3386.2 4629.3 True False 3157.56403222151 2401.9272774130814 3356.8220269449903 3204.007615528803 2479.554731144551 2084.2482849710173 2874.0992570932585 2161.224371763127 2998.8656902968005 2621.255068181962 3479.717047819703 0.9074197668456849 0.6902651119055971 0.9646824672276972 0.9207667093324003 0.7125736653496506 0.5989706221305985 0.8259577481721083 0.6210919859467573 0.8618130868358417 0.7532954640160671 1.0 11.764754283177538 -9.628055893440393 1.1638648214917633 0.9717531898641529 0.783371179406923 0.0 0.13379541838865325 0.3654301587630761 1.0177889391948016 0.03253064314197141 0.02304210255561576 2.3547462099631053e-10 9.628055893440393 -0.1883820104572299 RS(ph)HSPSIDGTPK ddPTM_A549_MK2206_60min_R1 1 RSHSPSIDGTPK 12 1 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 RS(0.517)HS(0.382)PS(0.101)IDGT(0.001)PK 40.941 0.022094 5052500.0 924.25 1391.9 907.97 948.67 1232.9 730.9 774.45 820.52 1490.0 1378.5 1604.7 True False 1080.240804257007 1462.7417647144152 1036.7337990425679 1181.0941925874142 1051.542043212754 808.2433528678458 915.1575403568264 936.8312227371127 1152.5173790410704 1067.0958925901712 1206.2087025330559 0.8955670788881606 1.212677177376217 0.8594978604162047 0.97917896804019 0.8717745453208058 0.6700692435484199 0.7587058014379952 0.7766742361995511 0.9554875343054374 0.8846693696946923 1.0 10.23626383374069 -5.794266816381963 24.999957809180266 0.9167146694435353 1.0541229696734864 0.1606830357894864 0.12589803524677784 256.29843820337015 195185.64274527066 0.019337959798934913 0.060129620170652334 1.6059543038610135e-06 5.794266816381963 0.1374083002299511 RS(ph)HSPSIDGTPK ddPTM_A549_PD325901_60min_R1 2 RSHSPSIDGTPK 12 1 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 RS(0.648)HS(0.339)PS(0.011)IDGT(0.001)PK;RS(0.635)HS(0.364)PS(0.002)IDGTPK 66.335 0.0022504 33215000.0 3671.5 4802.3 4215.6 4795.299999999999 5881.3 5503.4 5084.4 4481.6 4637.7 5411.8 5700.5 True False 4044.2279771845533 5207.006674673315 4501.6959664621345 5091.49479008353 5468.217777383532 5458.582135046454 5277.889624290437 4392.210972252813 4442.7935970361805 5070.098024416434 4999.37463844681 0.8089467722789027 1.0415316016986897 0.9004518148815323 1.0184263349516327 1.093780357113301 1.091852987585325 1.0557099649427661 0.8785520769888473 0.8886698674009462 1.0141464465226786 1.0 12.2875319270621 -5.244906148881708 23.343460796678926 0.9730585384096577 0.8089464477907937 0.28432634554232317 0.07746122520767768 1492.7628832771616 2107562.5513155297 0.011849488993559944 0.40468831039999503 5.689758733514401e-06 5.244906148881708 -0.164112090618864 RS(ph)KSDGEAKPEPSPSPR ddPTM_A549_MK2206_60min_R1 1 RSKSDGEAKPEPSPSPR 17 3 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RS(0.5)KS(0.5)DGEAKPEPSPSPR 48.656000000000006 0.0065167 8559700.0 886.1 1031.2 1063.4 1051.6 1217.1 1208.7 686.62 822.19 1294.8 1745.1 1635.0 True False 1035.6520169349565 1083.683675388681 1214.206110225961 1309.242047208117 1038.0662022826205 1336.6038317298746 811.3699662467611 938.7379503512726 1001.5298673707235 1350.8806979754136 1228.9843762955984 0.8426893269844619 0.8817717265496227 0.9879752205522889 1.065304061191104 0.8446537013038009 1.087567797858149 0.6601955093134629 0.7638322898626377 0.8149248165298344 1.0991845982999677 1.0 10.26325085994619 RS(ph)KSDGEAKPEPSPSPR ddPTM_A549_PD325901_60min_R1 1 RSKSDGEAKPEPSPSPR 17 3 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RS(0.5)KS(0.5)DGEAKPEPSPSPR 75.358 0.00014174 19274000.0 1912.8 1758.6 1763.3 1860.1 2294.8 1813.1 1874.9 1896.1 2005.7 2175.7 1924.6 True False 2106.9860478710657 1906.8033938072363 1882.9681415842776 1974.9941524063938 2133.6211646302245 1798.3347147313884 1946.250345484646 1858.2807980383257 1921.407404009633 2038.3259306927143 1687.8864010445977 1.2482984912770765 1.1296988900598732 1.1155775296364423 1.170098977741696 1.264078650855751 1.065435869154723 1.153069510057165 1.1009513418013643 1.1383511371502928 1.207620328851063 1.0 10.721002095007812 -14.999999999982025 0.16489787581188253 0.3873437709492778 1.1942312480250248 0.0 0.08171223449274298 28.948800845814443 0.3046640013710294 5.708375342839388 0.07340568964073493 1.0000000000413888e-15 14.999999999982025 0.806887477075747 RS(ph)KSEDMDNVQSK ddPTM_A549_PD325901_60min_R1 1 RSKSEDMDNVQSK 13 2 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 RS(0.5)KS(0.5)EDMDNVQSK 41.412 0.046826 2888100.0 544.81 539.92 410.29 334.35 629.46 697.73 813.48 778.08 708.25 802.97 936.82 True False 600.1187101320755 585.420953249405 438.1347466741985 355.0020401360558 585.2489011191132 692.0479182116442 844.4374265533366 762.5605840080484 678.4847155057195 752.2703371642826 821.5970789912714 0.7304294592537751 0.7125402076260601 0.533272035499597 0.43208775835950525 0.7123307958174117 0.842320324533428 1.0277999376410976 0.9281442248362105 0.8258119860147746 0.9156195371189663 1.0 9.682287242253254 -7.230887236324458 2.8727272847878798 0.9236535390913935 0.6039115150855953 0.7295400250432116 0.09263936638538568 0.12351611164306449 2.037755146753064 0.01599330805046238 0.028361607425634705 5.8764191274582155e-08 7.230887236324458 -0.3197420240057982 RS(ph)LAALSQIAYQR ddPTM_A549_MK2206_60min_R1 1 RSLAALSQIAYQR 13 1 E7EX44;Q05682-3;Q05682-5;E9PGZ1 E7EX44;Q05682-5 CALD1 Caldesmon 1 RS(1)LAALSQIAYQR 49.31 0.012816 1791200.0 311.88 388.73 319.12 214.05 406.55 370.77 341.33 317.57 598.85 510.05 646.44 True False 364.517719266081 408.5146965999247 364.37601457147696 266.4922596090696 346.7470335535284 410.0046353027931 403.345242752916 362.58652001733657 463.21143116694316 394.82935075489064 485.91110716362476 0.7501736714640153 0.8407189927896879 0.7498820446777268 0.548438295976905 0.7136017852680315 0.8437852711292909 0.8300803105887726 0.7461992835147107 0.9532843031121786 0.8125546935109195 1.0 8.924548600346272 -8.655921797977076 0.8737083285546726 0.9920730902415182 0.732920458633071 0.3063284775407942 0.09620177114685521 0.24399578398938981 0.3739301012638974 0.019444951732508566 0.021293836501405053 2.208402357190942e-09 8.655921797977076 -0.25915263160844726 RS(ph)LAALSQIAYQR ddPTM_A549_PD325901_60min_R1 2 RSLAALSQIAYQR 13 1 E7EX44;Q05682-3;Q05682-5;E9PGZ1 E7EX44;Q05682-5 CALD1 Caldesmon 1 RS(1)LAALSQIAYQR;RS(1)LAALSQIAYQR 69.52199999999999 0.0013667999999999998 3544300.0 791.5799999999999 1026.08 816.53 952.8299999999999 1053.25 891.36 791.45 784.29 1011.93 1102.3799999999999 1044.04 True False 871.9406188696034 1112.5513626280724 871.944635993768 1011.6841450660631 979.2733535152437 884.1010596894662 821.5690628480579 768.6467206863973 969.4021011813672 1032.7755386666518 915.6296987148517 0.9522852088496377 1.2150669251877846 0.9522895961299654 1.1049053416310441 1.0695080717562135 0.9655661682122827 0.8972721876553216 0.8394733392388266 1.058727237159289 1.1279401925431451 1.0 9.83862044765933 -7.2451943258614 23.13425724402963 0.9979327272409958 1.0641348609432149 0.12023998744313125 0.0983421696632665 580.0677645187474 826060.58616728 0.013663496081963595 0.023606935868778267 5.685984534954239e-08 7.2451943258614 0.06620213370221906 RS(ph)LELSSLAGPGEDPLSADSLGKPTR ddPTM_A549_MK2206_60min_R1 2 RSLELSSLAGPGEDPLSADSLGKPTR 26 2 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 RS(0.966)LELS(0.026)S(0.007)LAGPGEDPLSADSLGKPTR;RS(0.968)LELS(0.026)S(0.006)LAGPGEDPLSADSLGKPTR 78.694 9.8521e-07 7456100.0 1279.9 1436.32 1788.77 1402.4499999999998 1541.04 1401.28 1472.87 1232.45 2353.3 2019.3500000000001 1797.23 True False 1495.9158294493288 1509.422552981256 2042.444483532907 1746.0503129583717 1314.3550574033434 1549.5625195056168 1740.4714138619142 1407.1535617198301 1820.2813074478881 1563.177432500517 1350.928189975375 1.1073244607299197 1.1173225669447093 1.5118823477731538 1.2924819586377858 0.9729274043998606 1.1470354464465373 1.2883522801412854 1.041619807893327 1.3474301009893566 1.1571136379417848 1.0 10.39973527337465 -11.065632693118621 1.3761727789651255 0.9999325765858976 1.2192983144372884 0.05094457629504234 0.15200923876035222 0.5317880361196548 1.7962434349949676 0.10735413290943394 0.023728985665325702 8.597403441003265e-12 11.065632693118621 0.2193657378513908 RS(ph)LELSSLAGPGEDPLSADSLGKPTR ddPTM_A549_PD325901_60min_R1 2 RSLELSSLAGPGEDPLSADSLGKPTR 26 2 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 RS(0.992)LELS(0.007)S(0.001)LAGPGEDPLSADSLGKPTR;RS(0.999)LELS(0.001)SLAGPGEDPLSADSLGKPTR 137.35 5.905000000000001e-25 15388700.0 2331.5 2588.7 2202.3 1722.7 2934.5 2298.2 2862.4 2513.6 2523.1000000000004 2438.4 3489.5 True False 2568.1921636404145 2806.8588340434385 2351.7613215057313 1829.1072664644353 2728.390843475419 2279.48422116578 2971.3301983653823 2463.4642761189466 2417.0628813166 2284.4390078600527 3060.3136217630286 0.8391924753649576 0.9171801262729484 0.7684706903179732 0.5976862153790294 0.8915396200156797 0.7448531434672315 0.9709234299501686 0.8049711828880334 0.7898088823733511 0.7464721888680157 1.0 11.579463792932074 -10.899214992537319 0.6474297334496483 1.0337539588952436 0.8096933104016636 0.0 0.12036947339911558 1.0402434304276764 0.5800663464673534 0.1380995303712718 0.018793428797270972 1.2612030358282037e-11 10.899214992537319 -0.22406064849357998 RS(ph)LEQNIQLPAALLSR ddPTM_A549_PD325901_60min_R1 1 RSLEQNIQLPAALLSR 16 1 P33993;P33993-3 P33993 MCM7 DNA replication licensing factor MCM7 1 RS(1)LEQNIQLPAALLSR 48.824 0.0099785 1054700.0 731.68 451.47 778.38 643.97 911.7 926.17 649.03 675.75 589.47 623.2 755.89 True False 805.9596149656528 489.51696133410303 831.205547579182 683.7465643380172 847.6653371942539 918.6275785906846 673.7291918128439 662.2716361343798 564.696625837143 583.8510456440229 662.9203219815031 1.2157714709312242 0.7384250340537329 1.2538543773928452 1.031415905752087 1.2786835899984759 1.3857284927468498 1.0163049305820533 0.9990214723766737 0.8518318221852599 0.880725822220779 1.0 9.3726916694791 -8.11031117211268 3.477075566266334 0.9331707789292356 1.1399072724533046 0.2745560397889599 0.16336754203695592 0.2657550157700622 5.972499190331498 0.02664736583770919 0.035170052213207854 7.756911345660159e-09 8.11031117211268 0.20673649352406898 RS(ph)LLTK ddPTM_A549_MK2206_60min_R1 2 RSLLTK 6 1 Q9HD15 Q9HD15 SRA1 Steroid receptor RNA activator 1 1 RS(0.999)LLT(0.001)K;RS(1)LLTK 62.54600000000001 0.025547999999999998 4832100.0 1077.64 1432.45 1421.09 931.77 1337.42 1053.0900000000001 874.4000000000001 1076.4099999999999 1216.79 1796.3899999999999 1848.92 True False 1259.5192862315616 1505.3555865113628 1622.6219307701826 1160.0536918287455 1140.6872896695613 1164.5272848154339 1033.2671615830707 1228.9944138673711 941.1890078143517 1390.5842513529608 1389.782136403949 0.906271028558878 1.083159401088907 1.1675369025599256 0.8347018294755003 0.8207669819537912 0.8379207462175616 0.7434741996732249 0.8843072462043476 0.6772205392203927 1.0005771515750572 1.0 10.44064302706112 -6.282040708394059 23.394040683667043 0.8364276942970524 1.0554061214576465 0.41143361456630034 0.10694772631514997 268.1415963274227 304490.67501031485 0.017706949816813866 0.04120346235243873 5.22347224726814e-07 6.282040708394059 0.218978427160594 RS(ph)LLTK ddPTM_A549_PD325901_60min_R1 2 RSLLTK 6 1 Q9HD15 Q9HD15 SRA1 Steroid receptor RNA activator 1 1 RS(1)LLTK;RS(1)LLTK 93.429 0.015179 14460600.0 2034.85 2139.27 2404.8 2008.4299999999998 3110.9 2956.0 2485.0 2374.31 2264.8 2482.3 2873.7 True False 2241.4264740226035 2319.553790668719 2568.004189237154 2132.486159624522 2892.4011160223818 2931.9273160586763 2579.568034844177 2326.9525244398387 2169.6183320541545 2325.567154368032 2520.253117885204 0.8893656189198291 0.9203654086201881 1.0189469347396418 0.8461396771979532 1.1476629452399822 1.163346369954664 1.0235353014893778 0.9233011192115624 0.8608731863705522 0.9227514243963967 1.0 11.299352920601319 -4.143403390118205 16.06202465368143 0.960838312242567 0.988386760905524 0.0 0.10335682946457839 0.0 0.0 0.014629480659712132 0.0 7.18781035216602e-05 4.143403390118205 0.027548448662957026 RS(ph)LNLEDYK ddPTM_A549_MK2206_60min_R1 1 RSLNLEDYK 9 1 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 RS(1)LNLEDYK 47.938 0.013956999999999999 2055500.0 1018.4 1197.0 1018.1 1143.9 1374.1 1100.0 1143.8 1029.4 1629.8 1652.6 1508.7 True False 1190.2810225105063 1257.922187199624 1162.4818890549664 1424.1555513516225 1171.9717102592635 1216.4012698790953 1351.613654412988 1175.3206024052838 1260.6529022557966 1279.2765122194535 1134.048151998269 1.049585963711639 1.1092317244052472 1.0250727775593964 1.2558157683535436 1.033440871266507 1.0726187135314444 1.1918485577806848 1.036393913551457 1.1116396601276952 1.1280618992811569 1.0 10.147266183473324 -10.793829460758571 0.7150097727336882 0.9891441923241755 1.1011411028820508 0.0 0.07750636758863447 1.0295321996229332 0.7821364410112126 0.07070997148901963 0.012195507177745972 1.607572392406135e-11 10.793829460758571 0.1119969105578753 RS(ph)LNLEDYK ddPTM_A549_PD325901_60min_R1 2 RSLNLEDYK 9 1 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 RS(1)LNLEDYK;RS(1)LNLEDYK 62.891000000000005 0.0029171999999999996 7867800.0 2525.0 1881.9499999999998 2309.8 2315.5 2671.2 2330.3 2216.1 2511.5 2098.68 2506.1 2489.3 True False 2781.3361411932437 2040.5485312040994 2466.556917955748 2458.523176117953 2483.5841271397294 2311.3228094085025 2300.4348981964513 2461.406162266364 2010.4797779562919 2347.8644183062975 2183.1318809728355 1.2740119666769008 0.9346886227939657 1.12982497276189 1.126145056808203 1.1376244141664076 1.058718820220125 1.0537315304888242 1.1274656303262474 0.920915403910639 1.0754569793832405 1.0 11.092183569493102 -8.75806667737846 24.999983722884426 0.9626544936317097 1.0989122222561596 0.2016436261123511 0.0858955664104869 62.01456882799154 459678.8744731315 0.01266518768757434 0.014078596095030389 1.7455541368306588e-09 8.75806667737846 0.13625772862444985 RS(ph)LNLEDYKK ddPTM_A549_MK2206_60min_R1 2 RSLNLEDYKK 10 2 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 RS(1)LNLEDYKK;RS(1)LNLEDYKK 80.596 0.00024196 5778900.0 3017.5 2988.4 3349.8 2908.2 4910.4 3482.0 3126.6 3264.2 5473.6 4720.3 5225.4 True False 3526.7802292080255 3140.4967955115735 3824.8520105650978 3620.7091305540584 4188.086664767545 3850.4629288354627 3694.6627486340676 3726.910346193246 4233.838339543091 3653.9809516092714 3927.7889662966477 0.8979047141968228 0.7995584341367047 0.9737926460370387 0.9218186520768904 1.0662707952755215 0.9803130875602788 0.9406469594820454 0.9488570740874599 1.0779189961254474 0.9302895300544778 1.0 11.939501702742357 -5.868467669276483 0.5615714332773464 1.0273309809507523 0.7898467306931772 0.25628994586858656 0.06358054260001558 1.3250674958402386 0.4149395280895301 0.011212579597554598 0.17896782003433606 1.35373086438849e-06 5.868467669276483 -0.23748425025757502 RS(ph)LNLEDYKK ddPTM_A549_PD325901_60min_R1 2 RSLNLEDYKK 10 2 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 RS(1)LNLEDYKK;RS(1)LNLEDYKK 70.977 0.00058566 10018500.0 4633.1 4291.6 4809.8 4361.0 5438.0 5799.4 4872.9 5499.700000000001 5880.6 5376.1 5511.8 True False 5103.448901292047 4653.268193371511 5136.221951677008 4630.369065450396 5056.053640081555 5752.171609184939 5058.340876053195 5390.004169068817 5633.458832337361 5036.652128509035 4833.8835421789545 1.0557657950922792 0.962635560573305 1.0625456544122223 0.9578983492356085 1.045960995122041 1.1899690091813944 1.0464341624939235 1.1150463435946125 1.165410540651541 1.0419473461784474 1.0 12.238967000805557 -7.002530544154353 24.910465036229898 1.0885829756850067 1.009098531773595 0.3031960418378231 0.059156921604587596 118.82331786862797 1169713.4469406067 0.010305250862255817 0.019227286981296915 9.941901495893549e-08 7.002530544154353 -0.07948444391141174 RS(ph)LS(ph)VEHLETK ddPTM_A549_MK2206_60min_R1 1 RSLSVEHLETK 11 1 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 2 RS(0.996)LS(0.988)VEHLET(0.016)K 46.408 0.008574700000000001 2514400.0 439.31 389.49 423.52 235.73 884.32 454.11 343.52 893.81 670.16 494.44 861.83 True False 513.4547879016994 409.31337735370204 483.58150442251195 293.483860582322 754.2376994516202 502.1636187861785 405.9331374050965 1020.5103046783245 518.3698300256134 382.74566059650624 647.8138257020405 0.7925962175093512 0.6318379773851325 0.7464822225713555 0.45303735261326267 1.1642815721542332 0.7751665661688838 0.6266200585718957 1.5753141785333002 0.8001833388842114 0.5908266316819065 1.0 9.339435448366178 -6.7591798742497335 24.999995995558304 0.9385489960339488 0.66072728073128 0.19763276788405937 0.26849140576610336 69.1396633302627 764968.3637973398 0.03413953667753742 0.06846367174282633 1.7410856085710314e-07 6.7591798742497335 -0.27782171530266886 RS(ph)LSPILPGR ddPTM_A549_MK2206_60min_R1 1 RSLSPILPGR 10 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RS(0.587)LS(0.413)PILPGR 56.225 0.006530500000000001 6764800.0 275.53 122.69 244.72 121.91 242.39 0.0 214.26 149.47 198.21 266.65 229.26 True False 322.0327279382559 128.93439694863974 279.42497582706153 151.7779554727479 206.73475209209136 0.0 253.1882685736377 170.65783023267707 153.31575147632927 206.41357980353206 172.32841474588918 1.8687151994818536 0.7481900018564143 1.6214678016918687 0.8807482834247362 1.1996556249701296 0.0 1.4692195071078806 0.9903058093137136 0.889671919180621 1.197791902791562 1.0 7.4290167928646875 -2.872850717406942 1.1158804844010601 0.9526372703650168 199.99981248988243 0.24379227107166945 0.41138651358444484 355.5661115021237 2.3865442109415858 0.052877779260544495 178881.23535283472 0.00134013726151557 2.872850717406942 199.0471752195174 RS(ph)LSVEHLETK ddPTM_A549_PD325901_60min_R1 1 RSLSVEHLETK 11 1 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 RS(0.5)LS(0.5)VEHLETK 87.863 0.00012815 10722000.0 2265.8 2265.9 2220.0 2418.4 3365.6 2594.0 2287.4 2599.9 2431.4 2430.5 2591.1 True False 2495.822348006199 2456.8553451767407 2370.6625499444795 2567.7790754150988 3129.2118666896786 2572.8753240379588 2374.448258713307 2548.0429549179066 2329.21671342126 2277.037815208275 2272.411126336204 1.098314613531311 1.0811667469424493 1.043236640795139 1.1299799783831876 1.3770447743471887 1.1322226397413357 1.044902584393528 1.1212948772285334 1.024997935640565 1.002036026323956 1.0 11.150008156594659 -8.597458938320338 1.2005743448653248 1.0077772196045989 1.139063060989734 0.2871442613322194 0.08473704987988441 0.4098446774438857 1.1512440512462292 0.0180191782697595 0.020491722584771613 2.5266265863585804e-09 8.597458938320338 0.13128584138513522 RS(ph)LT(ph)NSHLEK ddPTM_A549_MK2206_60min_R1 1 RSLTNSHLEK 10 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 2 RS(0.884)LT(0.919)NS(0.197)HLEK 45.973 0.016884 6574100.0 1978.4 2190.2 1970.0 1954.8 2865.2 1873.4 1675.5 1605.1 3292.4 2686.7 2952.0 True False 2312.3055527639294 2301.6718248994284 2249.375622667994 2433.7260877543076 2443.7328755074886 2071.641944537726 1979.9166619767097 1832.6278404125912 2546.6766568824296 2079.7726040058114 2218.9369289447136 1.0420780882057878 1.0372858258725102 1.0137176921643087 1.096798226217157 1.101307947797184 0.9336191207214536 0.8922816309692598 0.8259035290760409 1.1477012364175592 0.9372833345898272 1.0 11.115652945621141 RS(ph)LTNS(ph)HLEK ddPTM_A549_PD325901_60min_R1 1 RSLTNSHLEK 10 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 2 RS(0.831)LT(0.32)NS(0.848)HLEK 52.372 0.005782 24758000.0 3003.9 3554.8 3816.0 3267.7 3137.1 3143.9 2794.5 3302.2 3582.0 3813.4 3689.1 True False 3308.853716645697 3854.375471571687 4074.976707472129 3469.5384075148477 2916.760918407473 3118.2971207567225 2900.8462267090767 3236.3350304742157 3431.460996740542 3572.6212732010845 3235.36408713168 1.0227144851506247 1.191326653745728 1.2595110156782414 1.0723795882245746 0.9015247866564948 0.9638164474778652 0.896605806513983 1.000300103270107 1.0606104612426208 1.1042408758293414 1.0 11.659712357666004 -6.51818786503119 24.942221861032042 1.0039325239171715 1.161989488348739 0.4690594233091734 0.07786183909352079 129.5241249195316 688699.722331884 0.010866933138314367 0.02310702898112451 3.032579081858801e-07 6.51818786503119 0.15805696443156747 RS(ph)LTNSHLEK ddPTM_A549_MK2206_60min_R1 2 RSLTNSHLEK 10 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 RS(0.998)LT(0.002)NSHLEK;RS(0.999)LT(0.001)NSHLEK 105.6 6.939899999999999e-05 38327000.0 2984.3 3495.6 3109.6000000000004 2548.31 3737.1000000000004 3138.37 2678.74 3160.0 4318.8 4127.0 4003.6 True False 3487.976880870094 3673.5111090852147 3550.588038704769 3172.646064397984 3187.3775405064357 3470.470230318596 3165.4323838278096 3607.939677094131 3340.5986957064274 3194.7078336740183 3009.3956262611987 1.1590290257726843 1.2206806832005326 1.1798342523398744 1.0542469181227607 1.059142079124491 1.1532116947449098 1.0518498652038208 1.1988917793359557 1.1100563404010484 1.0615778815506045 1.0 11.55525806581848 -14.999999999999444 0.13435540235162638 0.5398767931839823 1.1849119072056482 0.31527391180587994 0.05726773061412904 47.40768665937415 0.4323519848134117 5.820878251615053 0.1515500972574317 1.0000000000012802e-15 14.999999999999444 0.6450351140216659 RS(ph)LTNSHLEK ddPTM_A549_PD325901_60min_R1 3 RSLTNSHLEK 10 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 RS(1)LTNSHLEK;RS(0.866)LT(0.134)NSHLEK;RS(1)LTNSHLEK 127.3 3.5021e-07 141830000.0 9419.5 10314.499999999998 9658.699999999999 10896.5 12419.5 11213.400000000001 11511.8 11035.6 11529.0 11667.5 12236.899999999998 True False 10375.760705730601 11183.7391137409 10314.197464481414 11569.552057252984 11547.197164949042 11122.081788190928 11949.887848498673 10815.486300739283 11044.476223177468 10930.812058811991 10731.838876100308 0.9668203954158603 1.0421083695774607 0.9610838909863829 1.0780586804203942 1.0759756364461015 1.0363630983092456 1.1134986265132014 1.0077943235641804 1.0291317593085934 1.0185404556487327 1.0 13.38960967932798 -3.3636090831645795 15.496191395574005 1.02477004936763 0.5100584759138137 0.0 0.044866589115549506 0.0 0.0 0.005751642792982988 0.0 0.0004329033203393738 3.3636090831645795 -0.5147115734538162 RS(ph)LTVSDDAESSEPER ddPTM_A549_MK2206_60min_R1 4 RSLTVSDDAESSEPER 16 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RS(0.998)LT(0.002)VSDDAESSEPER;RS(0.998)LT(0.002)VSDDAESSEPER;RS(0.985)LT(0.015)VSDDAESSEPER;RS(0.997)LT(0.003)VSDDAESSEPER 147.25 7.357300000000001e-15 41258900.0 2001.86 2322.37 2394.38 2311.79 3284.7599999999998 2830.7299999999996 2449.7799999999997 3083.73 4169.179999999999 4630.91 4700.9 True False 2339.725027221998 2440.5687133557135 2733.939088022229 2878.178653780197 2801.576155295261 3130.275969713503 2894.8733155340515 3520.8581710270514 3224.867386812383 3584.784214693326 3533.5367917602325 0.6621482002615469 0.6906872227980803 0.7737117933503436 0.8145319614307542 0.792853257344932 0.8858761502110057 0.8192565936442308 0.9964119177242625 0.9126457645304195 1.014503152493727 1.0 11.786897215318497 -3.5338932192169303 0.18601869213527822 1.0137168850404632 2.930747860504315e-11 0.8893520055001659 0.038603784537447616 6.222546384606744 0.1095899225863752 0.038497559314374215 1.6223749618992205 0.00029248714329609913 3.5338932192169303 -1.0137168850111558 RS(ph)LTVSDDAESSEPER ddPTM_A549_PD325901_60min_R1 4 RSLTVSDDAESSEPER 16 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RS(1)LTVSDDAESSEPER;RS(0.999)LT(0.001)VSDDAESSEPER;RS(0.842)LT(0.077)VS(0.077)DDAES(0.002)S(0.002)EPER;RS(1)LTVSDDAESSEPER 262.05 1.5266e-91 68426600.0 4681.929999999999 4808.38 4638.79 4508.5 5125.99 5545.9 4580.49 5394.09 5757.76 6695.639999999999 6706.51 True False 5157.2360869453005 5213.599057611075 4953.606184710336 4786.979805453593 4765.9581461054895 5500.736029137285 4754.803053490303 5286.500643368257 5515.781370349756 6272.876147714932 5881.651786069632 0.8768346502864943 0.8864174975402653 0.8422134401840446 0.8138835788938221 0.8103094707839383 0.9352366017596409 0.8084128789725008 0.8988122445278115 0.9377946146716097 1.0665160699536638 1.0 12.522005658927675 -8.99719684736956 0.7890495595410356 0.987343388005318 0.8503739570506409 0.6794855221476102 0.0445967265839901 0.21958585657405832 0.28904677663479944 0.010327462180014511 0.009257002457103628 1.006475372617686e-09 8.99719684736956 -0.13696943095467706 RS(ph)NGSRTRCSIWTAR ddPTM_A549_PD325901_60min_R1 1 RSNGSRTRCSIWTAR 15 3 H3BV86 H3BV86 CX3CL1 1 RS(0.462)NGS(0.462)RT(0.074)RCS(0.002)IWTAR 41.644 0.059028 6042000.0 610.5 975.44 827.22 678.57 929.95 882.09 874.31 893.11 619.18 1038.6 984.56 True False 672.477510573654 1057.6437521069784 883.3601236779597 720.4837277557153 864.6335201533363 874.9065514960079 907.5823454907895 875.2962204187593 593.1580178564509 973.0226187514152 863.4653616400657 0.7788123767887464 1.2248826636173227 1.0230406023469267 0.8344095313646733 1.0013528724661889 1.013250317110823 1.0510929399263083 1.013701602061051 0.6869505647913969 1.1268808941024067 1.0 9.753994494231383 -8.65973515773965 23.106670118773938 0.8520406939910494 0.9989939433266518 0.0 0.15225521704709136 8.916904774156967 2006.8728550542924 0.025058242552758868 0.028413367283299122 2.189096175648059e-09 8.65973515773965 0.1469532493356024 RS(ph)NSPDKFK ddPTM_A549_MK2206_60min_R1 4 RSNSPDKFK 9 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 RS(0.576)NS(0.424)PDKFK;RS(0.5)NS(0.5)PDKFK;RS(0.5)NS(0.5)PDKFK;RS(0.5)NS(0.5)PDKFK 73.848 0.0007222 607443900.0 9995.899999999998 10702.800000000001 9164.6 8743.34 11732.699999999999 9009.800000000001 10631.3 10059.5 13603.8 13259.1 13273.7 True False 11682.963543708525 11247.526804645051 10464.2780870574 10885.458692503445 10006.835372213704 9963.211055778802 12562.869596223813 11485.46493092671 10522.561020804638 10263.860101155116 9977.473954516745 1.170934005637741 1.1272920236041668 1.04879031854754 1.0910034686260104 1.0029427706682879 0.9985704900054901 1.2591232664192196 1.1511395552906762 1.0546317704032828 1.0287032717844105 1.0 13.28445889235117 -9.231190262436797 2.0472016623230798 1.0182143160858275 1.1017191020675028 0.18763313420670713 0.07227569731518253 0.356150339034695 3.0823562366699795 0.015588085484329725 0.014302432030414236 5.872320324865689e-10 9.231190262436797 0.08350478598167532 RS(ph)NSPDKFK ddPTM_A549_PD325901_60min_R1 1 RSNSPDKFK 9 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 RS(0.5)NS(0.5)PDKFK 45.257 0.016053 505700000.0 2956.5 2617.6 2741.6 2966.3 3410.6 2586.8 2989.9 3059.1 2952.8 3134.5 3396.9 True False 3256.6417035397335 2838.1943384679976 2927.661462580083 3149.5216140439134 3171.051221931253 2565.733958450806 3103.6822806360587 2998.0838506824743 2828.7040846386003 2936.5871350628827 2979.102834723264 1.0931618961190546 0.9527010297822244 0.9827325960206541 1.0572047320200948 1.064431608392538 0.8612438377573304 1.0418177729418217 1.0063713866261932 0.9495154217801164 0.9857286901395833 1.0 11.540662209050025 RS(ph)NSTTQVSQPR ddPTM_A549_MK2206_60min_R1 2 RSNSTTQVSQPR 12 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RS(0.465)NS(0.465)T(0.061)T(0.009)QVSQPR;RS(0.483)NS(0.483)T(0.016)T(0.016)QVS(0.001)QPR 64.675 0.0026431 13803900.0 695.83 669.05 571.07 567.33 560.78 521.09 483.71 514.1800000000001 631.49 721.6 1085.41 True False 813.2690925898323 703.1017872563979 652.0563131152339 706.3258754684115 478.29000486077393 576.2313979284527 571.5938457563442 587.066589610209 488.4585232823124 558.5900588270346 815.8727412079547 0.9968087564559792 0.8617787453168347 0.7992132598397889 0.8657304500977056 0.5862311371656237 0.7062760756969317 0.7005919145062511 0.7195565680267946 0.5986945005162405 0.6846534154333974 1.0 9.672200329782825 -5.216517849166983 1.2864538576013167 0.7726351613469277 1.1116242973531973 0.2902208890301712 0.11483870206765916 2.3223716265465106 3.0073000031345054 0.02311328786318182 1.0607451856417256 6.074102982575623e-06 5.216517849166983 0.3389891360062697 RS(ph)NSTTQVSQPR ddPTM_A549_PD325901_60min_R1 2 RSNSTTQVSQPR 12 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RS(0.487)NS(0.487)T(0.011)T(0.011)QVS(0.002)QPR;RS(0.446)NS(0.446)T(0.091)T(0.017)QVSQPR 62.378 0.0031861 21222700.0 1112.04 1073.74 1059.72 970.33 1226.9 1289.6399999999999 952.76 965.22 1276.37 1128.6299999999999 954.63 True False 1224.9334821594202 1164.227838090858 1131.6389718140372 1030.2650803206798 1140.7267765752222 1279.1375994187788 989.0178031702774 945.9679298995587 1222.7286075962375 1057.3681091867993 837.2165618981631 1.4631023057907662 1.3905934152225619 1.3516681624744147 1.2305837309104721 1.3625229462600827 1.527845551118433 1.181316577072897 1.1298963409835456 1.460468728454236 1.2629565124577824 1.0 9.709457041182025 -10.927904934584642 1.0097260555585377 0.9854681259621646 1.3478415417167278 0.1771116265497209 0.1389062533663621 0.3770860829295053 0.6355888881163413 0.10424273028566343 0.0208103177101934 1.1805790316433265e-11 10.927904934584642 0.36237341575456317 RS(ph)NTLDIMDGR ddPTM_A549_MK2206_60min_R1 1 RSNTLDIMDGR 11 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 RS(0.619)NT(0.381)LDIMDGR 124.45 2.0464e-06 15493000.0 333.92 229.8 352.75 285.3 363.85 313.85 406.52 502.76 424.71 503.65 635.28 True False 390.2775324398158 241.49583844484005 402.7752542619973 355.19851280760383 310.32814698918054 347.0613986832311 480.3794219198878 574.0277696379255 328.51386312250537 389.8751151998837 477.52244316395587 0.8172967323879585 0.5057266771478701 0.843468741685311 0.743836269671722 0.6498713336550557 0.7267959938881211 1.0059829203775266 1.202095896968836 0.6879548130677308 0.8164540133792649 1.0 8.899424730002576 -7.649299328573305 7.98625064441634 0.8909827476764859 0.7077259305252913 0.34440829710967125 0.14912992577790662 0.2961112188922756 19.817790325966246 0.026147113620037302 0.03880515080654068 2.2423359069835504e-08 7.649299328573305 -0.18325681715119457 RS(ph)NTLDIMDGR ddPTM_A549_PD325901_60min_R1 3 RSNTLDIMDGR 11 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 RS(0.569)NT(0.431)LDIMDGR;RS(0.5)NT(0.5)LDIMDGR;RS(0.592)NT(0.408)LDIMDGR 71.344 0.00067805 25795000.0 3130.5 3039.7200000000003 2670.99 2970.13 2992.46 3544.04 3000.51 2891.49 3084.96 3155.6400000000003 3397.8700000000003 True False 3448.3060554477056 3295.8878722982663 2852.2594433676604 3153.5881844453515 2782.2799330265625 3515.178513262718 3114.696049992073 2833.8169636199777 2955.3098594373796 2956.3923518551105 2979.953530872601 1.1571677275242478 1.1060198886165693 0.9571489668607186 1.0582675708778273 0.9336655435065946 1.1796084995437464 1.0452163155309393 0.9509601187607006 0.9917301826421417 0.9920934407958398 1.0 11.541074118268194 -8.022330145320534 23.757734730118113 0.9928618981022189 1.0606483746175897 0.22427852030687945 0.07017969729550762 527.9966597632567 561751.4240077293 0.010821232518316551 0.014036044609454615 9.498824301913768e-09 8.022330145320534 0.06778647651537073 RS(ph)PDVSPR ddPTM_A549_PD325901_60min_R1 2 RSPDVSPR 8 1 Q8IY50-2 Q8IY50-2 1 RS(1)PDVSPR;RS(0.999)PDVS(0.001)PR 56.431999999999995 0.0078607 21742000.0 4428.3 4247.0 4390.0 4783.700000000001 5299.9 4797.6 4697.7 4536.1 5196.700000000001 5926.0 5404.9 True False 4877.857756057838 4604.909594847797 4687.93179921453 5079.178284429042 4927.653307662416 4758.529936239212 4876.473544180075 4445.623926998393 4978.300771011045 5551.831348662512 4740.131564484021 1.0290553520931247 0.9714729501076743 0.9889876969532653 1.0715268585550173 1.0395604511451588 1.003881405295381 1.0287633323761753 0.9378693115414222 1.0502452734248 1.1712399272332956 1.0 12.21071138699122 RS(ph)PEPNK ddPTM_A549_MK2206_60min_R1 1 RSPEPNK 7 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 RS(1)PEPNK 43.123999999999995 0.038405 3216000.0 1196.5 966.24 1064.4 557.04 489.29 306.61 317.53 517.32 492.2 1436.6 1443.5 True False 1398.4399483835641 1015.4174888552752 1215.3479252628488 693.5148250064761 417.31608915854395 339.0552666887541 375.2210908251059 590.6516942260557 380.7174858818891 1112.0710622379688 1085.0391114267259 1.2888382857874545 0.93583491890914 1.1200959601030223 0.6391611304172883 0.38460925948541336 0.31248206918820454 0.34581342448727487 0.5443598189280048 0.3508790437805333 1.024913342317862 1.0 10.083531331796728 -6.282403935723951 5.975271624689476 0.5989519739085506 1.098561656477189 0.48746808444533385 0.24552160593720954 0.14090189279262277 19.031715641748008 0.041338441248340727 0.10073269407215561 5.219105360836546e-07 6.282403935723951 0.49960968256863836 RS(ph)PERPTGDLR ddPTM_A549_MK2206_60min_R1 7 RSPERPTGDLR 11 2 Q5T200;Q5T200-2;Q5T9K0 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 RS(0.935)PERPT(0.065)GDLR;RS(1)PERPTGDLR;RS(0.999)PERPT(0.001)GDLR;RS(1)PERPTGDLR;RS(0.999)PERPT(0.001)GDLR;RS(0.997)PERPT(0.003)GDLR;RS(0.988)PERPT(0.012)GDLR 116.9 3.7755e-06 652395300.0 15026.19 14352.98 13586.69 12477.219999999998 16933.239999999998 13558.75 13207.460000000001 14501.59 18606.65 18524.33 21135.31 True False 17562.243516925708 15083.485375465696 15513.486943526397 15534.139460123679 14442.382827327383 14993.527925430168 15607.084521868657 16557.23479175679 14392.273483714447 14339.67098729408 15886.829222118722 1.1054593255446066 0.9494333428388242 0.9764998872101847 0.9777998644623179 0.9090790003092447 0.9437709511319704 0.9823914076031871 1.0421988277374243 0.9059248565268485 0.9026137806862943 1.0 13.955543592216197 -5.258683074172222 24.469357118040197 0.9606547988579239 1.1054593966464399 0.510877057041681 0.04117606281220325 124.03975154687579 1101087.8685516822 0.005865398412888499 0.055924995900132224 5.512097942957989e-06 5.258683074172222 0.14480459778851595 RS(ph)PERPTGDLR ddPTM_A549_PD325901_60min_R1 8 RSPERPTGDLR 11 2 Q5T200;Q5T200-2;Q5T9K0 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 RS(0.999)PERPT(0.001)GDLR;RS(1)PERPTGDLR;RS(0.991)PERPT(0.009)GDLR;RS(1)PERPTGDLR;RS(0.993)PERPT(0.007)GDLR;RS(1)PERPTGDLR;RS(1)PERPTGDLR;RS(1)PERPTGDLR 154.72 8.1349e-14 812413000.0 22834.039999999994 24039.660000000003 22192.949999999997 22734.840000000004 26906.3 23072.610000000004 23905.539999999997 23915.54 26622.45 23093.86 26076.79 True False 25152.134931268203 26065.5665153941 23699.097044049704 24139.119432232113 25016.494309695918 22884.714313859477 24815.27840631344 23438.525793321827 25503.601008563703 21635.709738377198 22869.510144391457 1.0998108298981881 1.1397518508627282 1.0362747996970847 1.0555153687081495 1.09387976182039 1.0006648226993944 1.0850813266063402 1.0248809723224401 1.1151791554581345 0.9460504226708661 1.0 14.481137843688808 -11.033490166194978 1.313909746588559 0.9998135716675806 1.0753683429128114 0.4127826140683123 0.04280862972110013 0.4262405435689551 1.3059349055678455 0.028649749807446855 0.006364587204174399 9.257843475785006e-12 11.033490166194978 0.0755547712452308 RS(ph)PESCSKPEK ddPTM_A549_MK2206_60min_R1 2 RSPESCSKPEK 11 2 Q03111 Q03111 MLLT1 Protein ENL 1 RS(1)PESCSKPEK;RS(1)PESCSKPEK 114.27 4.7402e-06 89368000.0 15427.5 17008.9 15208.8 14100.7 17811.9 15398.4 14410.4 15475.5 18966.3 19537.2 20361.9 True False 18031.284833838225 17874.580359114185 17365.636533011664 17555.372133004472 15191.793105281264 17027.848467369327 17028.58314876107 17669.199516731078 14670.463332957483 15123.732950825302 15305.47827014883 1.178093524134146 1.1678550675529054 1.134602671442217 1.1469992523685941 0.9925722566220428 1.1125329223183922 1.1125809235228483 1.1544362877697427 0.9585106112998865 0.9881254727153482 1.0 13.901760506883559 -8.76397589445695 24.99968030099281 0.980407781735137 1.1222053982519773 0.6403664387359793 0.04760490014268348 30.767211649762096 303237.7294806777 0.008629209018657467 0.009395614307344787 1.7219641500640354e-09 8.76397589445695 0.1417976165168403 RS(ph)PESCSKPEK ddPTM_A549_PD325901_60min_R1 2 RSPESCSKPEK 11 2 Q03111 Q03111 MLLT1 Protein ENL 1 RS(1)PESCSKPEK;RS(1)PESCSKPEK 91.969 6.0528999999999996e-05 167671000.0 14700.8 16039.6 17147.4 14751.0 13032.099999999999 11730.5 13766.7 14810.3 12202.3 14098.4 14486.7 True False 16193.214393843025 17391.31338298109 18311.125679692763 15662.13576804833 12116.770254304305 11634.970697234883 14290.599301927297 14514.896948044421 11689.479765641294 13208.224617952006 12704.927738757558 1.2745617076155518 1.3688636205247573 1.441261694376504 1.2327607122289672 0.9537063494931164 0.9157840907462486 1.1248076018828899 1.142461983767557 0.9200744786592885 1.0396143047440636 1.0 13.633100549412768 -6.618413035755159 3.7556051735854354 0.9838246575583734 1.360274680120039 0.7785066412128997 0.08172071193474187 0.07431826476572137 2.0150969890064467 0.012508428070007845 0.02735455200489394 2.4076145777239705e-07 6.618413035755159 0.3764500225616655 RS(ph)PGGGSEANGLALVSGFK ddPTM_A549_MK2206_60min_R1 2 RSPGGGSEANGLALVSGFK 19 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 RS(0.865)PGGGS(0.135)EANGLALVSGFK;RS(0.628)PGGGS(0.372)EANGLALVSGFK 96.303 8.6567e-07 8201100.0 2870.0 2987.8999999999996 3334.7 2728.18 3475.3 3370.3 3391.8 2990.6 4351.3 4454.4 4620.700000000001 True False 3354.3858352367943 3139.971347647247 3807.610603508098 3396.584222472653 2964.0879737020737 3726.942908975922 4008.0461558296674 3414.5267083283898 3365.7374975982634 3448.147946284842 3473.2526651676303 0.965776509402002 0.904043457343954 1.096266517461761 0.977926039339474 0.853404073774465 1.073041113983007 1.1539748305746211 0.9830919421934983 0.9690448182340407 0.9927719860018946 1.0 11.762071649463689 RS(ph)PGGGSEANGLALVSGFK ddPTM_A549_PD325901_60min_R1 3 RSPGGGSEANGLALVSGFK 19 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 RS(0.971)PGGGS(0.029)EANGLALVSGFK;RS(0.971)PGGGS(0.029)EANGLALVSGFK;RS(0.861)PGGGS(0.139)EANGLALVSGFK 111.58 1.6881999999999997e-10 16534200.0 4450.0 5086.5 4959.7 4362.5 5630.0 4858.5 4814.5 5174.8 6108.5 5662.0 6014.4 True False 4901.760724083142 5515.157206073306 5296.29506709893 4631.961717043648 5234.568222445595 4818.933986830539 4997.718432095488 5071.584554447935 5851.780987880958 5304.500353717036 5274.666928422859 0.9293024167402325 1.0455934528025932 1.004100379980303 0.8781524558610599 0.9923978695676139 0.9135996741070842 0.9474946001168306 0.9614985407172153 1.1094124173695754 1.0056559827755982 1.0 12.36486428163193 -8.732425573209843 23.032261129696927 1.0516669548515498 0.9599251250518704 0.31728463596321643 0.05080585197286831 70.07076252800064 55624.51114757036 0.009531434359274551 0.010806175946943811 1.8517162030603006e-09 8.732425573209843 -0.09174182979967938 RS(ph)PGGSGGASR ddPTM_A549_MK2206_60min_R1 1 RSPGGSGGASR 11 1 E7ER77;Q7Z2K6 E7ER77 ERMP1 Endoplasmic reticulum metallopeptidase 1 1 RS(1)PGGSGGASR 54.276 0.008046300000000001 3948000.0 255.16 268.08 258.02 0.0 185.37 214.97 127.75 65.82600000000001 260.46 357.05 281.45 True False 298.2247699369413 281.7241269377403 294.61111581766266 0.0 158.10231855815417 237.71798271446286 150.9605213772156 75.15703708367035 201.46622586915245 276.3921570180053 211.55819737516597 1.409658305076619 1.331662542189967 1.3925771701259824 0.0 0.7473230558766011 1.1236529033800875 0.7135649823557075 0.35525466758629487 0.9522969488716291 1.3064592175923406 1.0 7.724910777541201 RS(ph)PGGSGGASR ddPTM_A549_PD325901_60min_R1 2 RSPGGSGGASR 11 1 E7ER77;Q7Z2K6 E7ER77 ERMP1 Endoplasmic reticulum metallopeptidase 1 1 RS(1)PGGSGGASR;RS(1)PGGSGGASR 69.92 0.0013855 8341500.0 710.76 792.95 524.6600000000001 445.23 805.5699999999999 719.75 386.5 759.98 661.69 859.01 878.76 True False 782.9158319661431 859.7746793582668 560.2665826368788 472.7308459093051 748.9895422656302 713.8885946323524 401.2084690009155 744.8216027072237 633.881470388958 804.7719620004364 770.6780909186074 1.0158791863837064 1.1156080463289946 0.7269787337136712 0.6133959839779992 0.971857836743321 0.9263122995769025 0.5205915073084487 0.9664496908423021 0.822498365865578 1.0442387963062385 1.0 9.589984567925017 -10.756751833908016 0.9135334935173419 1.0036943351041252 0.8480288210141697 0.12369663499590378 0.16939691455420916 1.2348191213568167 1.7573804875127321 0.13126363677621408 0.030361721288398768 1.75084687795956e-11 10.756751833908016 -0.15566551408995555 RS(ph)PGTPRPPGASK ddPTM_A549_PD325901_60min_R1 2 RSPGTPRPPGASK 13 2 A0A2R8Y4Z8;Q9Y3X0;M0QYB4 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 RS(0.578)PGT(0.421)PRPPGASK;RS(1)PGTPRPPGASK 68.513 0.00078165 19657400.0 3162.8 3221.8 2491.82 3379.2 3359.9 2882.8900000000003 3101.7 3464.0 3084.8 3048.6000000000004 3761.8 True False 3483.8851276697023 3493.312392908083 2660.929889730923 3587.925509279976 3123.91221502575 2859.4126996591344 3219.736890815366 3394.907802544569 2955.156583680966 2856.110875722671 3299.1224480149485 1.056003583548687 1.0588610904727034 0.8065568743385018 1.0875393580613528 0.9468918672313539 0.8667191790288404 0.9759373716949039 1.029033585760739 0.8957401946263184 0.8657183601782246 1.0 11.687866609659682 -5.62040391499987 23.856276672922252 0.9521425783981481 1.057591698965338 0.24025612174557265 0.07762202893334952 8.885725073315719 2159.087072335775 0.009634740070966206 0.03731523592132597 2.3966029248457866e-06 5.62040391499987 0.10544912056718991 RS(ph)PGTSGEGVSPVITVRPVNVTAEK ddPTM_A549_MK2206_60min_R1 1 RSPGTSGEGVSPVITVRPVNVTAEK 25 2 A0A075B6G6;Q7Z7B0-2;Q7Z7B0;Q7Z7B0-3 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 RS(0.971)PGT(0.025)S(0.005)GEGVSPVITVRPVNVTAEK 96.74799999999999 1.771e-09 2241500.0 1005.0 1129.9 1023.1 1069.0 1147.3 914.47 798.41 766.23 1218.0 1143.5 1328.0 True False 1174.619430109053 1187.4070838068953 1168.1909642394028 1330.9050479892328 978.5336898191198 1011.2386084239421 943.4707622135637 874.8454489809608 942.1249447463249 885.1825558047584 998.2209490645599 1.1767128622273428 1.189523306357799 1.1702729394069749 1.3332770157112346 0.9802776536959185 1.0130408597130536 0.9451522361834792 0.8764046174354333 0.9438040201712827 0.8867601472742777 1.0 9.96321537090767 -6.819247852204092 9.655058466404194 0.9665028465967266 1.21191145196233 0.8296957748145439 0.058083103578079415 0.10797062844352037 17.208379475777832 0.007880724321288729 0.014924821654916626 1.5161848326197396e-07 6.819247852204092 0.24540860536560338 RS(ph)PILLPK ddPTM_A549_MK2206_60min_R1 2 RSPILLPK 8 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 RS(1)PILLPK;RS(1)PILLPK 91.70100000000001 0.0010890000000000001 12361200.0 2016.05 2541.8 2282.18 2034.5099999999998 2738.8 3106.1000000000004 2549.1 2695.3 3842.8999999999996 3586.3 3576.7 True False 2356.309952309806 2671.1667630944044 2605.827440883473 2532.9650413326244 2335.9261480664222 3434.78544033769 3012.238473915149 3077.3670290100663 2972.48928585029 2776.152339206478 2688.506678101813 0.8764381995039154 0.9935503544965522 0.9692471520001154 0.9421457130696038 0.8688563681439966 1.2775811450700125 1.1204132384904109 1.1446380453787093 1.1056283810122352 1.0326001277283587 1.0 11.392589339854565 -7.206656012005302 24.999946659305824 1.0790475194877394 0.9364253624877065 0.5573110635159062 0.0780900824961301 247.42866538752784 112911.98239152519 0.01271591730541652 0.02202460927042501 6.213609955746945e-08 7.206656012005302 -0.1426221570000329 RS(ph)PILLPK ddPTM_A549_PD325901_60min_R1 2 RSPILLPK 8 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 RS(1)PILLPK;RS(1)PILLPK 113.67 0.00056156 25309000.0 2551.5 2695.6000000000004 2565.4 2813.5 2384.5 2397.12 2275.05 3210.6000000000004 2592.7 2337.3 2712.0 True False 2810.526401684977 2922.7676722090237 2739.5034710034065 2987.2835050778913 2217.0209460784235 2377.598649482602 2361.6282727051284 3146.562064333023 2483.737835357119 2189.722479113888 2378.4411927844494 1.1816673921606125 1.2288584981944957 1.1518062667743574 1.255983756983568 0.9321319159810504 0.9996457581947356 0.9929311180237179 1.3229513825604962 1.044271282759528 0.9206544545885417 1.0 11.215800639612619 -2.000000000000005 0.17573593526457418 0.9960669067393791 1.9618270167155478 0.26575955837360177 0.11395547116871999 55.38201626792112 0.5734653742492524 0.1254981667195061 14.341992032771305 0.009999999999999887 2.000000000000005 0.9657601099761687 RS(ph)PLGQK ddPTM_A549_MK2206_60min_R1 2 RSPLGQK 7 1 A0A2R8Y6S3;C9J167;P54278;Q68D20;P54278-3 A0A2R8Y6S3 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL 1 RS(1)PLGQK;RS(1)PLGQK 52.549 0.019681999999999998 195321000.0 6154.4 6935.4 6408.2 5972.6 8155.9 6514.1 5499.4 6652.299999999999 9024.3 8760.5 8379.2 True False 7193.112259366324 7288.3822365114975 7316.979119381238 7435.8872681202065 6956.177914055397 7203.417738290382 6498.569794613381 7595.283896814332 6980.310458845857 6781.496965568508 6298.413385844699 1.1420514689512768 1.1571774969378308 1.1617178281479115 1.1805968920414005 1.1044333688368222 1.1436876713236424 1.0317788618350332 1.2059043177261548 1.1082648964473625 1.0766992494982164 1.0 12.620772734122735 -11.619561242833836 0.23901190790751914 0.8641520542778959 1.1624989935076553 0.3391144666833368 0.04881018735675125 4.374842220047658 0.22454150651014199 0.38489515906947797 0.03030589512948996 2.4012576262557135e-12 11.619561242833836 0.2983469392297594 RS(ph)PLGQK ddPTM_A549_PD325901_60min_R1 4 RSPLGQK 7 1 A0A2R8Y6S3;C9J167;P54278;Q68D20;P54278-3 A0A2R8Y6S3 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL 1 RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK 86.882 0.010433 231948400.0 17610.600000000002 17720.62 19105.28 18297.09 21452.959999999995 18784.13 20599.7 19549.01 19925.42 19817.559999999998 22136.800000000003 True False 19398.415147761483 19213.998837921295 20401.87919018163 19427.25969359363 19946.178098294233 18631.158273138462 21383.63285608836 19159.08965964834 19088.02388991455 18566.275879514054 19414.113936737034 0.9991913723682313 0.9896922878135034 1.0508787192999554 1.0006771237100716 1.0274060491913763 0.9596708010393924 1.1014477882312432 0.986863975460342 0.9832034545648036 0.9563287791559403 1.0 14.244818243466131 RS(ph)PLSYPAVNR ddPTM_A549_MK2206_60min_R1 1 RSPLSYPAVNR 11 1 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637;A0A590UJM5 DOCK4 Dedicator of cytokinesis protein 4 1 RS(1)PLSYPAVNR 68.786 0.0025253 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RS(ph)PLSYPAVNR ddPTM_A549_PD325901_60min_R1 2 RSPLSYPAVNR 11 1 C9J637;A0A590UJ51;H0Y7H7;H0Y599;Q8N1I0-2;Q8N1I0;Q8N1I0-3;A0A590UJM5 C9J637;A0A590UJM5 DOCK4 Dedicator of cytokinesis protein 4 1 RS(1)PLSYPAVNR;RS(1)PLSYPAVNR 98.58200000000001 0.00011535 12654300.0 2599.3999999999996 2466.5 2031.2599999999998 2535.7 2974.8 2236.61 2250.3 2391.0 2647.5 2638.2 3066.0 True False 2863.2891744228577 2674.3606111825015 2169.1135185586572 2692.324430007469 2765.86031050287 2218.3957897056835 2335.93639791141 2343.309629296786 2536.2347819292518 2471.6236017619717 2688.9014369753395 1.0648546410253257 0.9945922801063343 0.8066913456666618 1.0012730079968941 1.0286209351035565 0.8250193775049959 0.8687326228435622 0.8714747208929686 0.943223409773689 0.9191945706058394 1.0 11.392801158135052 -10.07972986976203 1.087141530030962 0.9928042392726972 0.9310458049172998 0.0 0.08323657071269291 0.8617881550972265 2.0438354397442904 0.028852563012185695 0.015131710140299572 8.32281287317892e-11 10.07972986976203 -0.06175843435539741 RS(ph)PPAPGLQPMR ddPTM_A549_MK2206_60min_R1 6 RSPPAPGLQPMR 12 1 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR 135.61 1.4819e-08 200525000.0 12695.33 14740.750000000002 15462.53 12937.539999999999 19635.719999999998 16772.760000000002 15230.66 17156.55 21987.38 20334.71 19719.390000000003 True False 14837.991332981452 15490.991212166116 17655.349262321084 16107.237880788249 16747.331599280988 18547.642330343006 17997.87377314366 19588.543502230787 17007.27353663091 15741.08488793056 14822.521235522729 1.0010436886689458 1.0450982640551982 1.1911164761909314 1.0866732875502076 1.1298571500201584 1.2513149440388647 1.2142248600738097 1.3215392436265234 1.1473941083567039 1.061970810350837 1.0 13.855503243159363 -4.202801308055639 12.84642706450991 1.1119929693917792 1.1133560279728718 0.0 0.10183537714782812 0.0 0.0 0.015295224298613195 0.0 6.269006093054744e-05 4.202801308055639 0.0013630585810926465 RS(ph)PPAPGLQPMR ddPTM_A549_PD325901_60min_R1 4 RSPPAPGLQPMR 12 1 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR 111.34 2.8325e-05 292443000.0 10194.8 10604.0 10410.3 9735.800000000001 13292.4 10910.8 10272.699999999999 10949.3 11535.8 12310.7 12360.800000000001 True False 11229.7685909849 11497.63629474124 11116.805560219367 10337.158254393942 12358.787680290567 10821.94606226421 10663.633219937132 10730.907621940318 11050.990442825103 11533.400301042802 10840.499961567115 1.0359087339880875 1.060618637101967 1.0254882708022546 0.9535684046900352 1.1400569829902907 0.9982884646124547 0.9836846324194428 0.9898904718402901 1.0194170455241216 1.0639177475146193 1.0 13.404143674565988 RS(ph)PPPETIK ddPTM_A549_MK2206_60min_R1 1 RSPPPETIK 9 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 RS(1)PPPETIK 52.693000000000005 0.0097944 3206600.0 1537.8 1664.6 1583.6 1194.2 1606.3 1391.6 1548.9 1528.9 1847.6 2293.7 2277.3 True False 1797.3430443997013 1749.3210299185394 1808.1782924147376 1486.779053609676 1370.015397852744 1538.8581883306802 1830.3150807136528 1745.6262570598778 1429.1215500109265 1775.551576956166 1711.7835597174114 1.0499826535875916 1.021928864772673 1.0563124538438957 0.8685555163616129 0.8003438227195686 0.8989794180432025 1.0692444557744258 1.0197704301752106 0.8348728096482315 1.0372523832681753 1.0 10.741284581574844 -6.24843489611213 24.401642267858115 0.9247630289759525 1.0406600917933484 0.21077693602950087 0.08327554825976295 633.2302486101435 1188190.7126985816 0.012530996246328804 0.032915981816554245 5.643715383847073e-07 6.24843489611213 0.11589706281739587 RS(ph)PPWEP ddPTM_A549_MK2206_60min_R1 2 RSPPWEP 7 1 Q9UBL3;H0YAQ0;F5H8F7;Q9UBL3-2;Q9UBL3-3 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 1 RS(1)PPWEP;RS(1)PPWEP 111.06 0.0066042 55390000.0 3007.5 2475.2 1807.6599999999999 1343.92 3609.1000000000004 2889.3 2574.0 3190.6000000000004 3919.1000000000004 3761.5 4072.5 True False 3515.092473684553 2601.1771075660054 2064.0133695797076 1673.1804603308613 3078.2061709458617 3195.0438082378823 3041.6624816043272 3642.8773208026996 3031.430107516685 2911.774537524792 3061.1858547179345 1.148278033582003 0.8497285793860054 0.6742528770014492 0.5465791819703258 1.0055600401399005 1.0437274833586614 0.993622284291064 1.190021610477605 0.990279666569284 0.9511916870506676 1.0 11.579874922973625 -6.945784040678602 24.999764995620406 1.0148020346462332 0.795789244246304 0.33707014956645553 0.1479829316276997 82.30439632004848 37951.24086047038 0.021035702504854585 0.039753739266928226 1.132963606007251e-07 6.945784040678602 -0.21901279039992916 RS(ph)PPWEP ddPTM_A549_PD325901_60min_R1 2 RSPPWEP 7 1 Q9UBL3;H0YAQ0;F5H8F7;Q9UBL3-2;Q9UBL3-3 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 1 RS(1)PPWEP;RS(1)PPWEP 134.66 0.0044935 68432000.0 6014.9 6152.2 4772.5 4737.1 5124.3 4481.200000000001 4208.8 4101.5 6626.8 5548.4 7172.8 True False 6625.528220064654 6670.667485147775 5096.390549373882 5029.699908265321 4764.386845875308 4444.706592937125 4368.96818714373 4019.692364935497 6348.2986413177605 5198.073077104131 6290.591072125478 1.053244145756562 1.0604198252063262 0.8101608403631144 0.7995591909562603 0.7573830171519171 0.7065642229761627 0.6945242723697718 0.6390007423542976 1.0091736322597717 0.8263250650861009 1.0 12.6189798656396 -8.809979053903282 24.979922145228524 1.0043321731802968 0.8130392546715659 0.11175997782777392 0.13803295501815102 105.18211091015061 54129.26849760779 0.024021025572756073 0.025572356796092353 1.5488913204028203e-09 8.809979053903282 -0.19129291850873087 RS(ph)PQQTVPYVVPLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RSPQQTVPYVVPLSPK 16 1 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 2 RS(0.699)PQQT(0.301)VPYVVPLS(1)PK 74.584 0.00013389 1943800.0 1197.4 1198.6 1158.4 1066.0 1291.6 1330.7 1403.6 1470.5 1805.8 1434.4 1495.7 True False 1399.4918463806762 1259.6036203654708 1322.6785387302562 1327.170047854559 1101.6073509721741 1471.5137907528297 1658.615951507317 1678.9478782173799 1396.7891832700438 1110.368043765934 1124.2764107800158 1.2447933915199 1.1203682726844422 1.1764709514918936 1.1804659736067724 0.9798367558097977 1.3088541008628856 1.475274172440014 1.4933586279307742 1.2423894781363958 0.9876290502222383 1.0 10.134781059933244 -10.44207206329186 1.0396690166385805 1.014644844114959 1.2428559003869235 0.31973145047233076 0.14030790378804628 0.520850671751242 1.0879744700124696 0.07406105510139942 0.027871876776758772 3.613498982034516e-11 10.44207206329186 0.22821105627196459 RS(ph)PQQTVPYVVPLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 RSPQQTVPYVVPLSPK 16 1 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 2 RS(0.983)PQQT(0.017)VPYVVPLS(1)PK;RS(0.946)PQQT(0.053)VPY(0.002)VVPLS(1)PK 92.833 2.0512e-06 16205600.0 2446.32 2911.8 2777.9 2517.2 3227.6000000000004 2876.0 3069.1 3200.3 3294.2 2718.4 3542.0 True False 2694.6686055143987 3157.187604962989 2966.424998869715 2672.681727024018 3000.9045106155245 2852.57880953476 3185.896279975961 3136.4675059132187 3155.75622988908 2546.7597600749536 3106.3564545879494 0.8674692183295623 1.0163635922400227 0.9549531878379374 0.860391190159966 0.9660528514631097 0.9183037591586208 1.0256055048899926 1.0096933664135024 1.0159028031790007 0.8198543204253019 1.0 11.601007673228189 -7.761087807241762 24.99999953142556 1.0091327392546718 0.9340164601142498 0.0 0.07043311716704603 6.400890521174213 455131.77042285586 0.0059880187996500765 0.00858566571198702 1.7334534863755574e-08 7.761087807241762 -0.07511627914042207 RS(ph)PRPPR ddPTM_A549_MK2206_60min_R1 2 RSPRPPR 7 2 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 RS(1)PRPPR;RS(1)PRPPR 56.729 0.012112999999999999 66628000.0 3039.7 3111.8 2214.93 2181.27 2529.3999999999996 2597.3 2352.5 2666.8 2737.5 3518.0 3909.5 True False 3552.7270464701355 3270.1773284275596 2529.0403796528008 2715.68124792093 2157.3286106759197 2872.144562051794 2779.9187987467703 3044.8270667324773 2117.4606208892164 2723.281356642887 2938.6632532890762 1.2089602449323764 1.1128111820119024 0.860609114304673 0.9241212802730714 0.7341190278475583 0.9773643029146563 0.945980726316759 1.0361265665007986 0.720552318650075 0.9267075271706874 1.0 11.520944332101664 -5.655996955253502 3.7033152516219086 0.8834834458550567 1.1908208692268758 0.5119301014769783 0.09714765041639012 0.14754519341325112 3.7215038796345805 0.016253933376087267 0.07422856435436116 2.2080202129260238e-06 5.655996955253502 0.30733742337181913 RS(ph)PRPPR ddPTM_A549_PD325901_60min_R1 2 RSPRPPR 7 2 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 RS(1)PRPPR;RS(1)PRPPR 67.993 0.0075852 87044000.0 3658.41 4039.1 4594.299999999999 3584.0 4871.5 2898.19 3445.06 3372.9 3925.2 3813.8 4480.7 True False 4029.809090020903 4379.489132222685 4906.09682577023 3805.375540145429 4529.342645762654 2874.588101531833 3576.163643509167 3305.624863511137 3760.2374942506913 3572.996017132818 3929.6023054975244 1.025500490058037 1.1144866049411075 1.2484970346507043 0.9683869369736724 1.152621128969232 0.7315213800415061 0.9100573965223158 0.8412110454247644 0.9569002667242201 0.9092513031494782 1.0 11.940167596912191 RS(ph)PRPSPVPK ddPTM_A549_MK2206_60min_R1 4 RSPRPSPVPK 10 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RS(0.995)PRPS(0.005)PVPK;RS(0.999)PRPS(0.001)PVPK;RS(0.808)PRPS(0.192)PVPK;RS(0.999)PRPS(0.001)PVPK 61.641000000000005 0.0021704 27679200.0 8707.11 10372.9 9524.199999999999 6868.67 10477.5 8740.32 7864.97 8579.24 10723.6 11021.109999999999 11557.3 True False 10176.657299598832 10900.836303761887 10874.87477432208 8551.494458346313 8936.273629460322 9665.214861045142 9293.933243179335 9795.373542820587 8294.721722070355 8531.433596506677 8687.303444746864 1.1714402937947985 1.2548009141264114 1.251812469023172 0.9843669572193114 1.028659086941876 1.1125678897390896 1.0698294703633606 1.1275505230272305 0.9548097145249486 0.9820577410203807 1.0 13.084692715947103 -5.801341939136742 0.3467016146461998 0.9785081008222807 1.3701537865204898 0.5053468968299234 0.07191336205216206 2.5228142843448658 0.2692824957173226 0.024680439800367476 0.38843888056608694 1.5800035431665611e-06 5.801341939136742 0.3916456856982091 RS(ph)PRPSPVPK ddPTM_A549_PD325901_60min_R1 4 RSPRPSPVPK 10 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RS(1)PRPSPVPK;RS(0.99)PRPS(0.01)PVPK;RS(0.997)PRPS(0.003)PVPK;RS(0.995)PRPS(0.005)PVPK 65.043 0.0011823 43411500.0 10752.0 12401.500000000002 11089.8 12848.400000000001 13041.6 12102.300000000001 11253.82 11897.599999999999 10286.699999999999 13174.9 12619.2 True False 11843.535124795942 13446.617928068035 11842.42051638481 13642.016487166455 12125.60300707753 12003.742881304775 11682.090278426602 11660.293034513365 9854.385771962843 12343.034565557506 11067.118399699682 1.0701552741242317 1.2150062412301401 1.0700545606077698 1.2326620168386961 1.0956422954150893 1.084631287728024 1.0555674798548833 1.0535979297763525 0.8904201993745953 1.1152889234375993 1.0 13.433992008928115 -8.08311503930094 1.2405129662468957 0.9501207061265441 1.1395807375847355 0.251915647827736 0.07686385807161066 0.19937754641962885 0.6073276327218311 0.01136227972245388 0.01602542669807512 8.258191711961093e-09 8.08311503930094 0.18946003145819146 RS(ph)PS(ph)PAPPPR ddPTM_A549_PD325901_60min_R1 4 RSPSPAPPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RS(1)PS(1)PAPPPR;RS(1)PS(1)PAPPPR;RS(1)PS(1)PAPPPR;RS(1)PS(1)PAPPPR 65.043 0.0014276 41905300.0 4844.29 5318.47 4315.32 3878.48 5543.26 3944.67 3588.57 4378.29 4059.2200000000003 4936.4 5971.41 True False 5336.078754622188 5766.67613207209 4608.18356532721 4118.044900932825 5153.920540808844 3912.545915371171 3725.134995090854 4290.961571247942 3888.6250997177926 4624.714861548707 5236.964425886797 1.0189259121649672 1.1011486164708089 0.8799340974226472 0.7863419656961866 0.9841427440928452 0.7471018699365413 0.7113156959167355 0.8193604581381772 0.7425341826833807 0.8830907536221396 1.0 12.354515089416696 -5.822398324101501 6.013912995991344 0.8526760281410345 1.0595861043086647 0.4590301381954438 0.0916828455680181 0.1579605103397285 11.071387328894023 0.01595306562607316 0.05177020731575276 1.505225877135406e-06 5.822398324101501 0.20691007616763024 RS(ph)PS(ph)PKPTK ddPTM_A549_MK2206_60min_R1 2 RSPSPKPTK 9 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RS(0.98)PS(0.902)PKPT(0.118)K;RS(1)PS(0.997)PKPT(0.003)K 65.563 0.0018231999999999999 17905300.0 7746.799999999999 6745.8 4442.42 3718.75 4333.11 3809.42 3875.17 3448.79 5004.79 9148.5 9763.7 True False 9054.270448924188 7089.132406358577 5072.421956168906 4629.8439169410285 3695.715259036109 4212.53029591166 4579.238227987042 3937.666543976412 3871.2130560073538 7081.847496090811 7339.103825588585 1.2337024606949267 0.9659397897658218 0.6911500472964225 0.630845948901632 0.5035649238467774 0.5739842896382272 0.6239505989847192 0.5365323393092367 0.5274776250623336 0.9649471739858997 1.0 12.841388191693246 -5.496539802880226 2.446816039965011 0.7003064875521162 1.2465863072042331 0.5338238717404177 0.1607375994865087 0.2795669548034526 2.7769623196198454 0.02872558897433189 0.2554093787195001 3.18757342273836e-06 5.496539802880226 0.5462798196521169 RS(ph)PS(ph)PKPTK ddPTM_A549_PD325901_60min_R1 3 RSPSPKPTK 9 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RS(0.996)PS(0.964)PKPT(0.04)K;RS(1)PS(0.985)PKPT(0.015)K;RS(0.986)PS(0.945)PKPT(0.069)K 62.042 0.0023276 66798000.0 12800.599999999999 12911.099999999999 11245.599999999999 10366.900000000001 11725.1 10009.1 8869.6 9846.400000000001 11638.8 13056.8 13718.8 True False 14100.107488696329 13999.16370850939 12008.794041286323 11007.239868061846 10901.569425399086 9927.589208106523 9207.137481631351 9650.005827648634 11149.661711017257 12232.391419712569 12031.474570638384 1.1719351111879701 1.1635451354128243 0.9981149002793547 0.9148703929378631 0.9060875590431186 0.8251348701956962 0.7652542859626246 0.8020634354494264 0.9267078316590468 1.0166992705586149 1.0 13.554525848778182 -5.864295351278583 2.69497320468222 0.921998058110258 1.1772158012460954 0.6429905074657811 0.07628074371220583 0.16146106270017865 2.3085014301180613 0.012747383064591165 0.05301776458495695 1.366798988482167e-06 5.864295351278583 0.25521774313583734 RS(ph)PS(ph)PPPTR ddPTM_A549_MK2206_60min_R1 1 RSPSPPPTR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RS(1)PS(0.996)PPPT(0.004)R 41.644 0.021402 10510000.0 475.15 331.02 324.78 300.31 363.44 211.84 253.06 184.25 480.73 570.07 709.71 True False 555.3437036978273 347.867504099264 370.83868768025906 373.88596348142835 309.97845744605667 234.25676819198873 299.037726338303 210.36800174195992 371.8454225680632 441.29079106919033 533.4694200004585 1.0410038192954902 0.6520851825001797 0.6951451644218714 0.7008573490137578 0.5810613426460138 0.43911939355734275 0.5605527048542839 0.39433938264311214 0.6970323108075128 0.8272091604966055 1.0 9.059261763770744 -10.10982997450042 0.9368318975286439 0.9715053024486758 0.6307694030659029 0.26957499630490134 0.16674950649131998 0.37558875630494526 0.6589214382216086 0.06829649248209596 0.03188033234453819 7.765510754584566e-11 10.10982997450042 -0.34073589938277293 RS(ph)PS(ph)PPPTR ddPTM_A549_PD325901_60min_R1 1 RSPSPPPTR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RS(1)PS(0.987)PPPT(0.013)R 49.928999999999995 0.0072435 17806000.0 598.55 565.65 666.02 769.23 934.61 595.94 751.98 767.48 893.02 1122.2 993.51 True False 659.3143553707789 613.3193106488478 711.2201223036133 816.7435900519162 868.9662178294631 591.0868622232773 780.5970103992449 752.1720093235874 855.4894749607028 1051.3441004841504 871.3145683787894 0.756689236354135 0.7039011315855992 0.8162610245653809 0.9373693723170373 0.9973048189086339 0.6783851477694014 0.8958842635348815 0.8632611419812657 0.9818376806811211 1.2066182968113717 1.0 9.767049854991976 -2.260701151811224 0.13382287208214202 1.0605212017131702 7.121187967301665e-18 0.48786676658361783 0.10520002419870252 42.39103839107864 0.39039170346932417 0.2307706970614364 8.48790326033123 0.005486543769597547 2.260701151811224 -1.0605212017131702 RS(ph)PS(ph)PYYSR ddPTM_A549_MK2206_60min_R1 3 RSPSPYYSR 9 1 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RS(1)PS(0.997)PY(0.002)YSR;RS(0.999)PS(0.967)PY(0.002)YS(0.031)R;RS(1)PS(0.997)PY(0.002)YS(0.001)R 84.169 0.00034101 282386000.0 7873.8099999999995 9241.9 6891.0 7163.7 9977.800000000001 8190.2 7670.0 7772.2 11673.3 10843.0 11297.3 True False 9202.716631827823 9712.273234653465 7868.24741919043 8918.806821590715 8510.078837511737 9056.881527785239 9063.539717911883 8873.933151364237 9029.316188429615 8393.558769209445 8491.868620381809 1.0837092568459983 1.1437144954577483 0.9265625471766497 1.050276119461409 1.0021444299180773 1.0665357570473135 1.067319823596655 1.044991808995421 1.0632896706336046 0.9884230602748134 1.0 13.051866335817078 RS(ph)PS(ph)PYYSR ddPTM_A549_PD325901_60min_R1 3 RSPSPYYSR 9 1 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RS(0.998)PS(0.864)PY(0.005)YS(0.133)R;RS(1)PS(0.995)PY(0.004)YS(0.001)R;RS(1)PS(1)PYYSR 91.245 0.00025768 415180000.0 9167.400000000001 9303.2 9007.6 8298.1 10581.0 9173.400000000001 9687.0 10064.5 11196.6 10390.5 10807.8 True False 10098.067699316816 10087.213313583245 9618.909903099053 8810.65479064754 9837.827062468361 9098.694871831072 10055.64408592979 9863.755652052485 10726.045839225335 9734.442056746178 9478.509116288997 1.0653645605470903 1.0642194030544507 1.014812539091066 0.9295401505186364 1.0379086986962822 0.9599289044513123 1.0608887919566357 1.040644212189598 1.1316173997018606 1.027001392024549 1.0 13.210444438755522 -7.929422338536106 24.99985678172553 1.0617283076898776 1.0117756373847115 0.13020782903321282 0.048720358689884086 72.68580279543075 25745.42697966804 0.009320553590768684 0.012878195325516971 1.1764613431979356e-08 7.929422338536106 -0.049952670305166036 RS(ph)PSAPAATSSASSSTSSYK ddPTM_A549_MK2206_60min_R1 2 RSPSAPAATSSASSSTSSYK 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 RS(0.815)PS(0.164)APAAT(0.011)S(0.008)S(0.001)ASSSTSSYK;RS(0.609)PS(0.391)APAATSSASSSTSSYK 102.21 7.0049e-10 21470600.0 3134.8999999999996 2927.4 3068.5 3134.4 4682.1 3391.7 3548.5 2935.5 4587.2 5306.299999999999 5246.3 True False 3663.9944790535974 3076.39215606364 3503.6594406886966 3902.3281407085615 3993.3692923403632 3750.607442771754 4193.216517472012 3351.6161145917144 3548.2065242531526 4107.603144614596 3943.4989194859945 0.9291227292972535 0.7801174081378028 0.8884646635443664 0.9895598351570489 1.0126462245514876 0.951086210329333 1.0633238662123348 0.8499092260505988 0.8997609982141531 1.0416138633429604 1.0 11.945260532042534 -6.065660671753382 5.359009113140083 0.9581479396037107 0.8497517270624398 0.3286392235563804 0.06750864498531292 0.1822119039851369 10.229397217170694 0.00909620806551765 0.02522064542799287 8.596849586711616e-07 6.065660671753382 -0.10839621254127085 RS(ph)PSAPAATSSASSSTSSYK ddPTM_A549_PD325901_60min_R1 1 RSPSAPAATSSASSSTSSYK 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 RS(0.44)PS(0.44)APAAT(0.038)S(0.045)S(0.032)AS(0.002)S(0.001)STSSYK 40.137 0.041576999999999996 14521000.0 2581.4 2398.1 2319.9 2221.1 2974.7 2688.2 2865.6 2522.8 2706.4 2488.1 2538.8 True False 2843.4618276737606 2600.1963031326823 2477.342364691981 2358.2923025159075 2765.767334157889 2666.3081904698684 2974.6519761164873 2472.4807749016854 2592.6594197595186 2331.0009413781972 2226.5436947791877 1.277074343674964 1.1678173256737054 1.1126403539714345 1.0591718042837626 1.2421796799420894 1.1975099328712222 1.3359953290346236 1.110456884676987 1.164432310867647 1.0469145280391046 1.0 11.120590208871691 -10.356113954070029 0.6533705595005131 0.9938388475986595 1.186392138444029 0.4040779950948431 0.07577347490921743 0.5911197813249084 0.44443924045641126 0.0599636098676598 0.01633617546610727 4.40439281945938e-11 10.356113954070029 0.19255329084536954 RS(ph)PSLSSK ddPTM_A549_MK2206_60min_R1 2 RSPSLSSK 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RS(0.999)PS(0.001)LSSK;RS(1)PSLSSK 72.652 0.0023232 34641000.0 4051.1 4589.3 4337.9 4389.5 5319.0 4641.2 3836.0 4642.200000000001 6709.299999999999 6867.5 6435.200000000001 True False 4734.82664011421 4822.875767514815 4953.079448513443 5464.927697052146 4536.582146036696 5132.328703420782 4532.9515460117345 5300.246066141258 5189.654262550504 5316.126980314105 4837.162237515253 0.9788438773859257 0.9970465183305954 1.0239638873592412 1.1297796990698752 0.9378602418692166 1.0610205842624685 0.9371096778304908 1.0957346075834498 1.072871656505844 1.0990177131302683 1.0 12.239945210978735 RS(ph)PSPAPPPR ddPTM_A549_MK2206_60min_R1 1 RSPSPAPPPR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RS(0.819)PS(0.181)PAPPPR 53.751000000000005 0.0085971 1683000.0 353.14 608.85 467.69 514.29 327.29 378.99 507.86 327.31 411.45 613.02 922.68 True False 412.7413985559313 639.8378643913871 534.0154746018245 640.2910730873552 279.14607455844146 419.0944702467987 600.1315881536806 373.7071948448352 318.2572319506365 474.5383562391196 693.5530913274756 0.5951114683461872 0.9225506632328949 0.7699705779981564 0.9232041225017458 0.4024869588918562 0.6042716491172188 0.8653001416301321 0.5388299749764673 0.4588794079794025 0.6842134541291467 1.0 9.43786251451991 -11.05778423029433 1.3909949182733425 0.9984962710900288 0.6572054836982955 0.00635521082391155 0.19343734916228564 0.40876861474959575 1.4210728026919384 0.12822731323924075 0.029038877580648985 8.754185997684183e-12 11.05778423029433 -0.34129078739173335 RS(ph)PSPLGTSVR ddPTM_A549_MK2206_60min_R1 2 RSPSPLGTSVR 11 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 RS(0.67)PS(0.33)PLGTSVR;RS(0.622)PS(0.378)PLGTSVR 94.781 0.00011989 65188000.0 1358.55 1403.9299999999998 1255.8400000000001 1332.9 1863.6599999999999 1685.26 1291.73 1019.95 2075.16 2281.2 2171.14 True False 1587.8400266414462 1475.3840403301313 1433.936995924554 1659.4605598361547 1589.5180827754725 1863.5930946149492 1526.4206205760518 1164.5310359658733 1605.1395733495754 1765.8753356377936 1631.9860175843578 0.9729495286924971 0.9040420839597471 0.8786453930818885 1.0168350353224622 0.9739777581723735 1.14191731702053 0.9353147662597242 0.7135667973979308 0.9835498319559624 1.0820407262138292 1.0 10.672412981402793 -5.89370109978691 0.007570328317205924 1.8890790829920179 2.4675342485481595e-05 0.05143691895506697 0.103680210429174 23381.177292757922 31.740668493502554 3775.4826618284874 4151.009031235592 1.277317611490037e-06 5.89370109978691 -1.8890544076495324 RS(ph)PSPTPTPGPSR ddPTM_A549_MK2206_60min_R1 1 RSPSPTPTPGPSR 13 1 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 1 RS(0.461)PS(0.461)PT(0.077)PT(0.001)PGPSR 50.07899999999999 0.01214 9007900.0 615.82 601.53 503.63 391.64 795.41 384.89 412.32 303.6 617.52 947.52 938.6 True False 719.7553606465239 632.1453076576356 575.0523070275539 487.5918175813877 678.4062426732557 425.6188043306957 487.23320684347203 346.6362297360059 477.65270597680654 733.4745739187798 705.5197159578282 1.02017752922662 0.895999492798613 0.8150761687033096 0.6911101228679668 0.9615695030609277 0.6032698940990852 0.6906018298609757 0.49132040096910023 0.6770224774347168 1.0396230712319634 1.0 9.462542589701647 -5.45910036469717 2.021652986018789 0.7892074248204004 1.0405303812507225 0.1731386216393791 0.16305876058741256 0.7861736588421285 4.614072206330326 0.025080083575135727 0.3111213578159741 3.4745585572216372e-06 5.45910036469717 0.2513229564303221 RS(ph)PSPYYS(ph)R ddPTM_A549_PD325901_60min_R1 1 RSPSPYYSR 9 1 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RS(0.996)PS(0.354)PY(0.002)YS(0.647)R 80.31 0.0027592 141940000.0 7106.3 7411.1 6932.4 6870.8 7310.6 7454.7 6854.4 6917.1 8481.9 7893.8 8167.1 True False 7827.726344618437 8035.6594062577105 7402.874351907707 7295.193711281036 6797.12867620085 7393.991394797905 7115.247942871599 6779.133014140027 8125.435239601781 7395.384120835667 7162.598475512492 1.0928612529907806 1.121891647804919 1.0335459089626022 1.0185121693226085 0.9489752496163075 1.0323057225777068 0.9933891962808225 0.9464628008000926 1.1344256232400907 1.0325001668206062 1.0 12.806267353666971 -5.766570123769916 24.76471125301665 1.0379813215313387 1.107376459300955 0.2366118902504013 0.05214718964725094 150.4285762556284 726098.6575386359 0.009226561688143987 0.03001642429230935 1.7117087717101836e-06 5.766570123769916 0.06939513776961626 RS(ph)PSPYYSR ddPTM_A549_MK2206_60min_R1 2 RSPSPYYSR 9 1 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 RS(1)PSPYYSR;RS(0.989)PS(0.011)PYYSR 88.803 0.00046352 52524000.0 1446.17 1855.0500000000002 1422.48 1539.8899999999999 2016.87 1537.88 1298.44 1473.7800000000002 1814.12 2047.37 2798.8 True False 1690.2481405381184 1949.4641214408196 1624.2090536714552 1917.163119128289 1720.1910947315323 1700.6174408378758 1534.3497407204056 1682.6928282619576 1403.224716554353 1584.86769503978 2103.780717049615 0.8034336120869845 0.9266479655611579 0.7720429417897124 0.9112941779488111 0.8176665375771499 0.8083625004524505 0.729329691200996 0.7998423099066144 0.6670014156809385 0.7533426284382105 1.0 11.038768620988138 -11.06605110432869 1.3996714146884432 0.999254249160183 0.7907291289915184 0.0 0.09983924036132567 0.29296927622815816 1.030241434517207 0.056540664640504085 0.01271126146289812 8.58912445557114e-12 11.06605110432869 -0.20852512016866465 RS(ph)PSPYYSR ddPTM_A549_PD325901_60min_R1 3 RSPSPYYSR 9 1 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 RS(0.999)PS(0.001)PYYSR;RS(0.836)PS(0.158)PY(0.004)YS(0.002)R;RS(1)PSPYYSR 94.54700000000001 0.00039527 102156500.0 6835.5 6787.7 6524.7 6082.5 7497.799999999999 7490.1 6439.7 6317.200000000001 7121.7 7755.5 8947.3 True False 7529.434927970863 7359.723300435224 6967.505378208441 6458.2022106402255 6971.180394005791 7429.103108934742 6684.766307439053 6191.198490252474 6822.399715378869 7265.816406438087 7846.838821607781 0.9595500938845736 0.9379220687149593 0.8879378736596543 0.8230323519397802 0.8884062171392261 0.9467638214356177 0.8519056475368478 0.7890054365847068 0.8694456290591923 0.9259545877800195 1.0 12.937895851416453 -10.642601394001387 0.9982404413251966 0.9976050501133609 0.8825118181119952 0.20808066066433195 0.053379420201067077 0.41254355215071914 0.7545401501619143 0.031940124839686314 0.009330767361896917 2.2771865288862976e-11 10.642601394001387 -0.11509323200136568 RS(ph)PSSEDDRDER ddPTM_A549_MK2206_60min_R1 1 RSPSSEDDRDER 12 2 Q9BVA0 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 1 RS(0.333)PS(0.333)S(0.333)EDDRDER 65.472 0.0019268 3715000.0 243.0 209.84 256.56 296.02 127.45 106.27 229.54 166.04 260.65 317.96 347.4 True False 284.0124592203976 220.519959700893 292.9440658638073 368.54491328884296 108.70227383199409 117.51542086368312 271.24444678611405 189.57667847617384 201.61319117252023 246.13261516718953 261.130992247762 1.087624478334328 0.8444802273475945 1.1218280271606402 1.4113411438316226 0.4162748852455514 0.4500247935035765 1.038729430203966 0.7259830663696282 0.7720768394324827 0.9425637801493055 1.0 8.028629883383775 -6.748432496634396 24.997445278102848 0.8270222177643415 1.0972948375367055 0.3328072946382482 0.2287109431986227 281.91270850878976 541794.2508454495 0.03458619728023028 0.0716454654300661 1.7847093683638055e-07 6.748432496634396 0.27027261977236405 RS(ph)PT(ph)SSPTPQR ddPTM_A549_MK2206_60min_R1 4 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(0.994)PT(0.567)S(0.391)S(0.045)PT(0.003)PQR;RS(0.999)PT(0.403)S(0.254)S(0.314)PT(0.03)PQR;RS(0.988)PT(0.495)S(0.269)S(0.222)PT(0.025)PQR;RS(0.996)PT(0.358)S(0.311)S(0.209)PT(0.126)PQR 103.35 0.00034243 525280200.0 7756.95 8689.409999999998 8056.0599999999995 8096.61 9522.930000000002 7825.24 8154.54 7916.02 11982.119999999999 12138.74 11317.55 True False 9066.133520780506 9131.66385352905 9198.53044606635 10080.279813470637 8122.119611949095 8653.301702826086 9636.114363924537 9038.14007679452 9268.188951513823 9396.590203278936 8507.089986510247 1.0657150136129674 1.0734180393071184 1.0812781410156147 1.1849269056110854 0.9547471138577819 1.0171870424020066 1.1327156970485315 1.0624244120053228 1.089466429320773 1.1045598692595442 1.0 13.054449999417415 -10.803823926262252 0.9446770408212508 0.9979613597729883 1.0741961447305521 0.0 0.06326218298449678 0.8015347091031609 1.2137680936421846 0.04308459319631568 0.009657739629028153 1.5709995973797016e-11 10.803823926262252 0.07623478495756386 RS(ph)PT(ph)SSPTPQR ddPTM_A549_PD325901_60min_R1 2 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(0.998)PT(0.502)S(0.388)S(0.109)PT(0.003)PQR;RS(0.858)PT(0.413)S(0.363)S(0.261)PT(0.105)PQR 70.373 0.0012875999999999999 13778600.0 1230.5900000000001 1725.41 1447.82 1426.6999999999998 1867.54 1761.25 1337.6 1373.63 1375.3700000000001 1929.8899999999999 1800.6699999999998 True False 1355.5185908875226 1870.816356026922 1546.0777716489265 1514.8240187292088 1736.3704330632413 1746.906963940577 1388.5030999628048 1346.2318720581115 1317.5679818780125 1808.036416042913 1579.1990053876016 0.8583583109304337 1.1846615592109908 0.9790265611707717 0.9592356717305603 1.0995260427212992 1.106198115614829 0.8792451712708671 0.8524776595383492 0.8343267551353517 1.1449072661992623 1.0 10.62497727092996 -7.772733997682061 24.985230077281905 0.9105801707513599 1.035612213503916 0.10215287324333677 0.11473875473014898 216.913561228271 479841.49568679667 0.015221215146583157 0.021132481531250212 1.687586343681469e-08 7.772733997682061 0.1250320427525562 RS(ph)PTEDFR ddPTM_A549_MK2206_60min_R1 4 RSPTEDFR 8 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(1)PTEDFR;RS(0.991)PT(0.009)EDFR;RS(1)PTEDFR;RS(0.884)PT(0.116)EDFR 125.75 0.00045612 67854000.0 6071.860000000001 6638.4 6354.139999999999 4908.62 7685.42 6246.58 6101.67 7258.62 6774.83 8802.189999999999 10071.71 True False 7096.641525275573 6976.266205101065 7255.252598487108 6111.232120356328 6554.904898814311 6907.588949455785 7210.264457704233 8287.55161359145 5240.341822180416 6813.7691656135485 7570.62644194504 0.9373915857156345 0.9214912740178377 0.9583424375939877 0.8072293841493828 0.8658338843000989 0.9124197320296116 0.9523999781254266 1.0946982627057502 0.6921939501791177 0.9000271269312503 1.0 12.886196967606892 -8.764718147071942 24.99999047326957 0.854647164592196 0.9255711989025149 0.08691003626639371 0.09432933020639586 196.42865711142673 1497728.0567761967 0.021618504801516853 0.023481172443880198 1.7190236549838871e-09 8.764718147071942 0.0709240343103189 RS(ph)PTEDFR ddPTM_A549_PD325901_60min_R1 4 RSPTEDFR 8 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(1)PTEDFR;RS(0.997)PT(0.003)EDFR;RS(1)PTEDFR;RS(0.931)PT(0.069)EDFR 121.36 0.0004944 68265000.0 6806.8099999999995 5702.52 5569.48 5669.5 6970.799999999999 5046.969999999999 5616.33 5979.6900000000005 6171.75 6431.73 6844.5 True False 7497.832340291326 6183.09137339568 5947.458404803954 6019.692138631281 6481.195055954484 5005.8691496375695 5830.062511523702 5860.420391973946 5912.372810338761 6025.629470154091 6002.669890860313 1.249082904210267 1.030056872327775 0.990802178520524 1.0028357794248999 1.0797187208016845 0.8339404366146345 0.9712448989408157 0.9763022952331667 0.9849571803608527 1.003824894540467 1.0 12.551388615643084 -5.215833419303576 2.407643739844299 0.9858539642400597 1.3296658126922867 0.6598478846308149 0.05483234929995944 0.28741678703476214 1.804616270157846 0.007160520481249945 0.2136066826426836 6.08368306068555e-06 5.215833419303576 0.343811848452227 RS(ph)PTGSTTSR ddPTM_A549_MK2206_60min_R1 2 RSPTGSTTSR 10 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RS(1)PTGSTTSR;RS(0.999)PTGSTTSR 127.02 9.754799999999999e-07 98315000.0 1994.8700000000001 2384.8 1567.76 1192.81 1977.4 1969.17 1915.1200000000001 1966.18 2298.62 2450.1099999999997 2940.1 True False 2331.5552861110896 2506.176133695625 1790.0919422304435 1485.0485035472757 1686.5270794459414 2177.546262370744 2263.0725142851925 2244.892036173715 1777.9862401418695 1896.6284493247026 2209.9920273680054 1.0550061978675371 1.1340204410965051 0.8099992760437046 0.671970072813293 0.7631371781257121 0.9853186054087703 1.0240184065190512 1.0157919161578488 0.8045215630299652 0.8582060142468008 1.0 11.10982544970984 -11.236059234015285 1.7158638467213123 1.0000922420206868 0.899087043520183 0.0 0.14204783191282555 0.9873100659050668 5.23838596845332 0.11007825585126411 0.022542084174336893 5.806852116738422e-12 11.236059234015285 -0.10100519850050382 RS(ph)PTGSTTSR ddPTM_A549_PD325901_60min_R1 2 RSPTGSTTSR 10 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RS(1)PTGSTTSR;RS(1)PTGSTTSR 101.53 0.00017673 190285000.0 1349.8899999999999 1332.38 1272.28 1327.06 1611.79 1282.54 1163.62 1272.4 1240.8000000000002 1582.43 1552.98 True False 1486.9298390635042 1444.6643385880163 1358.6245716411545 1409.0294822280682 1498.5834307736395 1272.095419464782 1207.9021958572964 1247.020983821511 1188.6534909982308 1482.5150997408073 1361.9733051513247 1.091746683609409 1.060714136704393 0.9975412634759401 1.0345499995475427 1.1003030860484717 0.9340090695268388 0.8868765571900031 0.9155986972027754 0.8727436040797901 1.0885052549367622 1.0 10.4114827112843 -7.277617950644535 23.601023740355114 0.9316940140873696 1.0526317126008256 0.410470693919736 0.06196290796311816 227.74136703531224 332224.7198017011 0.008142809783166163 0.013047438729975002 5.276938702031956e-08 7.277617950644535 0.12093769851345593 RS(ph)PTKSSLDYR ddPTM_A549_PD325901_60min_R1 1 RSPTKSSLDYR 11 2 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RS(0.996)PT(0.004)KSSLDYR 49.298 0.0058853 4238800.0 540.37 1023.5 533.9 770.47 726.08 1463.1 1128.9 1131.8 955.17 998.89 1277.6 True False 595.2279646006309 1109.7539369735625 570.1336646015118 818.0601820356727 675.0826456400177 1451.184998689258 1171.8609072577826 1109.2253611200765 915.0275265931493 935.8199149283658 1120.4632993736777 0.5312337895702202 0.990442023039843 0.5088374290529712 0.7301088598733722 0.6025031306401368 1.295165133476883 1.0458717460115252 0.9899702754566945 0.8166510470308452 0.8352080031996365 1.0 10.129879679000146 -7.18845451962009 24.999999999212136 0.9526832327934008 0.6843755557745668 0.46293216824954964 0.17020056008325574 119.73746503282706 41014.098244434994 0.024781323122873393 0.04292250949545438 6.479559472468263e-08 7.18845451962009 -0.26830767701883407 RS(ph)PTS(ph)SPTPQR ddPTM_A549_MK2206_60min_R1 2 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(1)PT(0.003)S(0.953)S(0.041)PT(0.004)PQR;RS(0.998)PT(0.01)S(0.667)S(0.195)PT(0.129)PQR 100.22 6.7246e-05 420597200.0 3209.73 3293.0 2847.17 2210.54 3598.99 3437.4100000000003 3464.8399999999997 3571.02 4657.4 4770.3 5270.58 True False 3751.45395363575 3460.599634459783 3250.9415185744315 2752.122399234911 3069.583338553225 3801.1544446319117 4094.356578384594 4077.223020790088 3602.50633633952 3692.685916882766 3961.7495253920824 0.9469185090050538 0.8735028835820452 0.8205822952052214 0.6946734975534683 0.7748049993769957 0.9594635956334778 1.0334718417059412 1.029147096417353 0.9093220844099151 0.9320846492730537 1.0 11.951921955929972 -7.2778659206044125 19.07946674583012 0.968680660880086 0.817789256906763 0.5628564327115447 0.06780585015920976 24.00867002241979 27886.235834617637 0.011202243426086158 0.01798151829270229 5.273926578141209e-08 7.2778659206044125 -0.150891403973323 RS(ph)PTS(ph)SPTPQR ddPTM_A549_PD325901_60min_R1 4 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(1)PT(0.009)S(0.893)S(0.097)PT(0.002)PQR;RS(0.997)PT(0.196)S(0.786)S(0.017)PT(0.004)PQR;RS(1)PT(0.001)S(0.819)S(0.18)PTPQR;RS(0.999)PT(0.048)S(0.521)S(0.397)PT(0.034)PQR 133.54 1.6111e-08 1331180400.0 12384.7 11995.0 11874.8 11693.4 14239.9 11602.400000000001 11227.0 11883.300000000001 12130.400000000001 14204.5 14080.8 True False 13641.985626865737 13005.860746456157 12680.69533697329 12415.674760361764 13239.738548988109 11507.913901163462 11654.249628650135 11646.278259231498 11620.601472602311 13307.62544584486 12348.950865545457 1.1047080659238793 1.0531956024493976 1.0268641826370388 1.0054032035225333 1.0721346852167029 0.9318940553299507 0.9437441087539191 0.9430985989041003 0.9410193302351458 1.0776320669453938 1.0 13.592100858981434 -7.257857134762268 24.92643064887124 0.9641958527088181 1.0484655685016229 0.42472571126698755 0.04538766926275136 164.67999836143815 1145894.7252746923 0.005203985084675918 0.008793995830223743 5.5225908020016075e-08 7.257857134762268 0.08426971579280473 RS(ph)PTS(ph)SPTPQRR ddPTM_A549_MK2206_60min_R1 1 RSPTSSPTPQRR 12 2 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(1)PT(0.087)S(0.576)S(0.331)PT(0.007)PQRR 71.344 0.00080614 20325000.0 424.99 493.27 586.66 372.67 503.54 519.59 599.44 612.63 830.26 771.94 466.01 True False 496.7179219920858 518.375336073482 669.8572095403067 463.9741667297918 429.46993303540467 574.5726689240723 708.35048872296 699.472178600689 642.2074356527779 597.5582178643865 350.28685577829464 1.4180318610255562 1.479859513773976 1.9123104349775437 1.3245548871621171 1.2260520940221262 1.6402918335243897 2.0222011675233764 1.9968553403082943 1.8333757749084572 1.7059110497785739 1.0 8.4523930430039 -10.814745602957732 1.1008327826761781 1.0058752017551802 1.6609995056173341 0.0 0.3280472032173 0.38063128154602927 0.8303090668514026 0.18692881137929104 0.04813458422208461 1.531984590796713e-11 10.814745602957732 0.6551243038621539 RS(ph)PTSS(ph)PTPQR ddPTM_A549_MK2206_60min_R1 2 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(0.991)PT(0.058)S(0.213)S(0.65)PT(0.088)PQR;RS(0.96)PT(0.05)S(0.338)S(0.581)PT(0.071)PQR 54.09 0.0048589 5394300.0 1190.35 1036.95 784.1500000000001 790.78 1082.78 948.91 804.6 1113.79 1415.6799999999998 1850.63 1601.8899999999999 True False 1391.2519787366273 1089.7263258284459 895.3542611751808 984.5211354994627 923.5044963499928 1049.32302636452 950.785405088906 1271.67314333882 1095.0307403764182 1432.5713976816448 1204.0965030851107 1.155432289000085 0.9050157716066545 0.7435901183012515 0.8176430485238877 0.7669688384475903 0.8714609034043092 0.789625584538136 1.0561222793028349 0.9094210784357843 1.1897479927988666 1.0 10.233735307111074 -8.252669564026272 24.80223108223227 0.9634486568473561 0.8559187852015683 0.2292253339542023 0.12891323181885964 775.0876863644279 2192054.8904716824 0.01768663565434896 0.022656224001768217 5.5889527235547664e-09 8.252669564026272 -0.10752987164578787 RS(ph)PTSS(ph)PTPQR ddPTM_A549_PD325901_60min_R1 4 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(0.898)PT(0.325)S(0.315)S(0.442)PT(0.019)PQR;RS(0.985)PT(0.13)S(0.164)S(0.627)PT(0.094)PQR;RS(0.999)PT(0.066)S(0.177)S(0.658)PT(0.1)PQR;RS(0.997)PT(0.029)S(0.136)S(0.497)PT(0.341)PQR 87.831 0.00050239 338328000.0 5093.28 5081.27 4646.349999999999 5348.07 6090.200000000001 5470.71 4758.509999999999 4726.98 5718.280000000001 5924.959999999999 6147.82 True False 5610.346036125439 5509.4864556186185 4961.679251772309 5678.408137551778 5662.445362049411 5426.158351568121 4939.597702006583 4632.696675655926 5477.960577454355 5550.857014440001 5391.677114241926 1.040556753909819 1.0218502219032188 0.920247846197282 1.0531803031291438 1.050219670442108 1.0063952711921704 0.9161523580406566 0.859231103327538 1.0160030842693668 1.0295232627669055 1.0 12.396518386591747 -7.536215034862532 24.832894617695924 0.9868692355180817 1.0155028996304476 0.11334976702178468 0.05760309645856792 608.5442066418215 1133138.765571467 0.009476127811426944 0.014058640416337859 2.9092762737713963e-08 7.536215034862532 0.028633664112365897 RS(ph)PTSS(ph)PTPQRR ddPTM_A549_MK2206_60min_R1 1 RSPTSSPTPQRR 12 2 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(1)PT(0.234)S(0.276)S(0.295)PT(0.195)PQRR 71.98 0.0006923999999999999 30049000.0 229.1 371.21 281.34 238.06 305.35 250.29 474.34 274.01 295.46 574.21 869.25 True False 267.76647904277013 390.10300343389497 321.23824247787473 296.38471068691956 260.433419494699 276.77552167094416 560.5214380435884 312.8517566204313 228.5387817526675 444.49556219383527 653.3912349204581 0.4098103322052785 0.5970435209180376 0.4916476152560897 0.45360986625876687 0.39858725611218737 0.4235984611955163 0.8578649484207186 0.4788122948397324 0.3497732591721851 0.6802900596729718 1.0 9.351803291288373 -10.869777487745448 1.0178272873195093 1.0122103770582689 0.49176308996167034 0.3578884910953146 0.158823395913177 0.27489615902854897 0.4857736514586552 0.10685060617998435 0.023501481189346196 1.3496542053971523e-11 10.869777487745448 -0.5204472870965986 RS(ph)PTSSAIPLQS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RSPTSSAIPLQSPR 14 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 2 RS(0.988)PT(0.011)S(0.001)S(0.001)AIPLQS(0.999)PR 74.444 0.00022916 3108400.0 963.55 1059.4 744.96 919.75 1540.0 1035.8 807.93 1135.3 1497.5 1038.7 1236.5 True False 1126.1736834642556 1113.3189349367433 850.6065298795678 1145.088791289147 1313.4680400256643 1145.4076684916058 954.7204229846875 1296.2322517104324 1158.318641016109 804.0569485915196 929.4429243360898 1.2116652394429626 1.1978346445877759 0.9151788750096348 1.232016255443652 1.4131777278996311 1.2323593396655117 1.0271963968811249 1.394633514087316 1.246250426666605 0.8650955615869208 1.0 9.860222463950683 -10.742961653551031 1.0302162700122104 1.0016978046426406 1.2074478802338096 0.3348916778257681 0.14151294956014623 0.6124915206136818 1.1698758947677226 0.08945252628567585 0.023755687241250767 1.8073336992331912e-11 10.742961653551031 0.20575007559116898 RS(ph)PTSSAIPLQSPR ddPTM_A549_MK2206_60min_R1 4 RSPTSSAIPLQSPR 14 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RS(0.984)PT(0.009)S(0.005)S(0.003)AIPLQSPR;RS(0.935)PT(0.064)S(0.001)SAIPLQSPR;RS(0.963)PT(0.024)S(0.01)S(0.004)AIPLQSPR;RS(0.954)PT(0.045)SSAIPLQSPR 155.88 4.8538e-19 243677000.0 38057.799999999996 45897.9 33996.4 43870.3 62638.0 41480.2 36451.2 37487.7 63492.0 60218.0 63444.0 True False 44481.026216123675 48233.90706421852 38817.600720035596 54618.52546941259 53424.03317605687 45869.607231671696 43073.91120802476 42801.69627626633 49111.16337588973 46614.71197678267 47689.103834677655 0.9327293372994526 1.0114240609643141 0.8139721151943508 1.1453040857877503 1.1202565970050584 0.9618467017263828 0.9032233307916155 0.8975152148936506 1.0298193806732432 0.9774709153348836 1.0 15.541372051662844 -6.251826210556646 24.993634318446723 1.009000509758218 0.9285800798371217 0.16398124442287998 0.08438102759813619 1033.2838576250713 2686466.4536368116 0.011832231130374248 0.030875667638443124 5.599816417089395e-07 6.251826210556646 -0.08042042992109633 RS(ph)PTSSAIPLQSPR ddPTM_A549_PD325901_60min_R1 2 RSPTSSAIPLQSPR 14 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RS(0.994)PT(0.004)S(0.002)S(0.001)AIPLQSPR;RS(0.999)PT(0.001)SSAIPLQSPR 86.179 5.188100000000001e-05 265640000.0 30681.0 31379.0 32419.0 32427.0 32866.0 32483.0 31513.0 34046.0 39827.0 39567.0 41558.0 True False 33795.71253384157 34023.41845461009 34619.14829128382 34429.942142939704 30557.605541544763 32218.46921770432 32712.244459575253 33366.9258214297 38153.20969212327 37068.73286745355 36446.62945786732 0.9272657866184791 0.9335134403564399 0.9498587059004705 0.9446673850250288 0.8384206165585125 0.8839903633599152 0.8975382620055703 0.9155010029117291 1.046824089350396 1.0170688872699571 1.0 15.153497781501942 -8.75183966663057 24.5705607633412 1.022111375071211 0.9106751616245127 0.710579089202412 0.031248827637702672 67.52389920287426 172827.7572338873 0.006034418342449243 0.006797921466696512 1.7707625699565923e-09 8.75183966663057 -0.1114362134466983 RS(ph)PTSSPT(ph)PQR ddPTM_A549_MK2206_60min_R1 1 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(0.999)PT(0.052)S(0.247)S(0.199)PT(0.503)PQR 63.29 0.0028531999999999997 8351200.0 751.86 520.3 527.67 393.57 756.31 710.09 446.15 511.7 731.87 916.79 907.26 True False 878.7555867878526 546.7810476190178 602.5015405143251 489.9946676680289 645.0578008777989 785.231252480406 527.2096799408592 584.2350420155273 566.1026135562338 709.6865022616923 681.9623028978251 1.2885691526552194 0.8017760590220472 0.8834821777598971 0.718506969646154 0.9458848357699392 1.151429117333562 0.7730774526694746 0.8566969750864076 0.8301083669151871 1.0406535658145037 1.0 9.413548182799131 -5.252123443763886 24.4111273101582 0.9009935764157652 1.2885694390393616 0.46022728655308787 0.12092144399439433 603.5543805660008 1581484.4666403364 0.016067782876461777 0.27424590598429105 5.59598518732794e-06 5.252123443763886 0.38757586262359645 RS(ph)PTSSPT(ph)PQRR ddPTM_A549_PD325901_60min_R1 2 RSPTSSPTPQRR 12 2 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 RS(1)PT(0.007)S(0.045)S(0.168)PT(0.78)PQRR;RS(1)PT(0.032)S(0.074)S(0.308)PT(0.587)PQRR 77.74600000000001 0.00051667 74901000.0 782.8199999999999 894.63 760.3199999999999 965.27 1065.4 814.6800000000001 991.31 1143.17 923.24 998.73 1075.1599999999999 True False 862.2913101183746 970.0236098042584 811.9198873755793 1024.8925356127738 990.5699794304691 808.0455161862927 1029.0348445156458 1120.3685775504837 884.4394334535842 935.6700173556715 942.9221360007842 0.9144883518968075 1.0287420061198473 0.8610677980465865 1.0869323101901613 1.0505321082308807 0.8569588997172728 1.0913253652948391 1.1881877991562517 0.9379771666033394 0.992308889177349 1.0 9.88099483167878 -5.241403551540046 21.965235505892505 0.9923411238111365 0.9144879739548455 0.04995621477608658 0.09553088191475288 2120.7079053130547 2324725.894568492 0.012692075282988675 0.5477077528414671 5.735832342180526e-06 5.241403551540046 -0.07785314985629099 RS(ph)PTSSPTPQR ddPTM_A549_MK2206_60min_R1 4 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.989)PT(0.004)S(0.004)S(0.003)PT(0.001)PQR;RS(0.956)PT(0.036)S(0.006)S(0.001)PTPQR;RS(0.983)PT(0.015)S(0.001)S(0.001)PTPQR;RS(0.99)PT(0.006)S(0.003)S(0.001)PTPQR 98.368 0.00022216 121888000.0 3371.7900000000004 4212.17 4503.84 3103.4900000000002 4280.22 3821.0600000000004 3944.44 3720.6800000000003 5191.32 5983.91 5909.650000000001 True False 3940.865719649155 4426.551461367281 5142.552235734528 3863.84518932096 3650.6053079731482 4225.40203298565 4661.093690341637 4248.097784104616 4015.4943088345594 4632.140574994014 4442.1208069573595 0.8871586097966705 0.9964950647974965 1.1576795092290457 0.869819925489039 0.8218158547726753 0.951212768992622 1.0492946709241489 0.9563219841862788 0.9039588258260318 1.0427768123142984 1.0 12.117032913303019 RS(ph)PTSSPTPQR ddPTM_A549_PD325901_60min_R1 2 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.996)PT(0.001)S(0.002)S(0.001)PTPQR;RS(0.665)PT(0.076)S(0.193)S(0.066)PTPQR 74.392 0.0011353 33897000.0 1511.13 1303.28 1338.51 1436.62 2104.7799999999997 1976.46 1622.99 1537.21 1565.36 1765.5 1850.13 True False 1664.5388051648906 1413.1119794615577 1429.3493377144969 1525.356754599254 1956.9475138968114 1960.3643650532251 1684.7537725842049 1506.5491406320843 1499.5733628860344 1654.0260286978855 1622.5757389403734 1.0258620076816392 0.870906636619868 0.8809137862790531 0.9400835461741782 1.2060746792472075 1.2081804984545408 1.0383205739809944 0.928492337507733 0.9241931374281079 1.0193829409640076 1.0 10.664070106888607 -4.891217819141018 19.64176941410852 0.984139797824032 6.741566036863976 0.0 0.11118660084937972 7569953.777092362 8673766.632446274 0.01630727140696119 1944461172.2134032 1.2846421897671415e-05 4.891217819141018 5.757426239039944 RS(ph)PTVEPSTLPR ddPTM_A549_MK2206_60min_R1 2 RSPTVEPSTLPR 12 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RS(1)PTVEPSTLPR;RS(0.999)PT(0.001)VEPSTLPR 129.01 3.4624e-08 81504000.0 1158.36 1622.79 1185.95 1290.46 1548.4 1227.4 1076.22 1348.3400000000001 2070.87 1980.44 2107.24 True False 1353.8628488170364 1705.383079503489 1354.1355429965 1606.6227579309511 1320.6324111530778 1357.2826533178195 1271.755243182677 1539.47132411807 1601.8212514998527 1533.0572285246847 1583.9541511346397 0.8547361347847214 1.0766618959784067 0.8549082951842306 1.0143114033825242 0.8337567158790956 0.8568951647656924 0.8028990247423993 0.971916594312591 1.0112800615803268 0.9678671743285651 1.0 10.62931486068062 -8.508633564204734 22.582280497398916 1.0046041716516976 0.9033519546371327 0.2318784831344205 0.07720487249083036 177.7942179739145 281849.97602058103 0.012156950842196486 0.014400580224177449 3.1000338483677436e-09 8.508633564204734 -0.10125221701456488 RS(ph)PTVEPSTLPR ddPTM_A549_PD325901_60min_R1 2 RSPTVEPSTLPR 12 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RS(0.999)PT(0.001)VEPSTLPR;RS(1)PTVEPSTLPR 126.69 4.4415e-07 117522000.0 4710.3 5162.6 5621.2 5263.6 6396.299999999999 5256.4 5613.4 5760.6 6157.200000000001 5911.1 6655.6 True False 5188.48618846041 5597.670420146276 6002.6884350215805 5588.720617497063 5947.045954037081 5213.593621153863 5827.021008770344 5645.700313896724 5898.434296239768 5537.872137205363 5837.003393324553 0.8888955237535384 0.9589972872977959 1.0283852913100089 0.9574640000875386 1.018852577820732 0.8931969488173249 0.9982898100478022 0.9672258063706779 1.0105243904749943 0.9487525985574569 1.0 12.511012191588952 -8.755059767651407 23.018979752154053 1.0049698525645185 0.966303575321537 0.0012698849079225694 0.04504900837028878 75.0168041600021 270674.68028293055 0.006684372073326952 0.0074823444171051925 1.7576817049757224e-09 8.755059767651407 -0.03866627724298155 RS(ph)PVPAQIAITVPK ddPTM_A549_MK2206_60min_R1 6 RSPVPAQIAITVPK 14 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(0.998)PVPAQIAIT(0.002)VPK 102.64 2.1742e-05 405484400.0 10137.82 13037.869999999999 10504.47 9938.33 14593.529999999999 12151.43 11474.189999999999 12613.7 17291.7 15685.600000000002 17281.5 True False 11848.836170097662 13701.441893754682 11994.161800531605 12373.221296148587 12446.841068932288 13437.286257133586 13558.901798678935 14401.730602836155 13375.1575591708 12142.212065877675 12990.026604863848 0.9121487222867665 1.0547662688099853 0.9233361997919726 0.9525170095891635 0.9581844169797024 1.0344310035594748 1.0437932277676847 1.1086759897353653 1.0296482036582395 0.9347334255136378 1.0 13.665116765120912 -7.259397311564059 24.785185983589837 1.0259757826178226 0.9629709607976704 0.2840745945294231 0.05130484779104192 150.77962761965318 1830054.342526275 0.006563485840316005 0.011012206345049546 5.50304023888815e-08 7.259397311564059 -0.06300482182015221 RS(ph)PVPAQIAITVPK ddPTM_A549_PD325901_60min_R1 5 RSPVPAQIAITVPK 14 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK 103.79 1.9852e-05 583354500.0 13632.7 14257.8 14676.199999999999 15391.2 17735.2 16094.699999999999 16058.599999999999 17796.1 17023.0 15836.8 17151.7 True False 15016.681668136693 15459.354843753454 15672.215187159985 16341.879468048646 16489.540735118502 15963.630099380776 16669.71881060309 17441.14282472963 16307.582509077121 14836.861745274811 15042.149633584448 0.998306893225494 1.027735743915053 1.041886669719652 1.086405857282679 1.0962223576278274 1.061259892252298 1.1082005708402731 1.1594847312108223 1.084125800255793 0.986352489949223 1.0 13.876723133008127 -5.643046788998004 2.0254895510605024 1.0619269842836152 1.0000391619386781 0.18338847726742236 0.0464019280089656 0.6575659774683721 4.640379180025527 0.007463363814113211 0.05635367878591415 2.2748523348761206e-06 5.643046788998004 -0.06188782234493706 RS(ph)PVSPQLQQQHQAAAAAFLQQR ddPTM_A549_MK2206_60min_R1 2 RSPVSPQLQQQHQAAAAAFLQQR 23 1 A0A5K1VW61;A0A5K1VW79;A0A5K1VW71;A0A5K1VW93;Q7Z5Q1-7;Q7Z5Q1-5;Q7Z5Q1-4;Q7Z5Q1-6;Q7Z5Q1-3;Q7Z5Q1;Q7Z5Q1-8;Q7Z5Q1-9 A0A5K1VW61 CPEB2 Cytoplasmic polyadenylation element-binding protein 2 1 RS(0.796)PVS(0.204)PQLQQQHQAAAAAFLQQR;RS(0.992)PVS(0.008)PQLQQQHQAAAAAFLQQR 169.13 5.884099999999999e-41 59518000.0 1635.81 1812.69 1910.86 1796.0700000000002 2681.2 1799.75 1908.6599999999999 2091.5 2802.6 3105.5 2586.8 True False 1911.8947362852614 1904.9481783750084 2181.8486813864774 2236.1072306286474 2286.799031764162 1990.1983504226368 2255.438815904786 2387.976529950117 2167.815574832552 2403.9653931365788 1944.426167951959 0.9832693921719009 0.9796968430955996 1.1221041546075223 1.150008813645988 1.1760791278451164 1.023540200818676 1.1599508652367156 1.228113758860458 1.1148870605438757 1.2363366800749482 1.0 10.92512873972126 -2.071264529858745 15.177152526164575 1.0790551518050848 0.005409637776365495 0.0 0.09509033617530971 0.0 0.0 0.011939078937513977 0.0 0.008486633945715282 2.071264529858745 -1.0736455140287193 RS(ph)PVSPQLQQQHQAAAAAFLQQR ddPTM_A549_PD325901_60min_R1 3 RSPVSPQLQQQHQAAAAAFLQQR 23 1 A0A5K1VW61;A0A5K1VW79;A0A5K1VW71;A0A5K1VW93;Q7Z5Q1-7;Q7Z5Q1-5;Q7Z5Q1-4;Q7Z5Q1-6;Q7Z5Q1-3;Q7Z5Q1;Q7Z5Q1-8;Q7Z5Q1-9 A0A5K1VW61 CPEB2 Cytoplasmic polyadenylation element-binding protein 2 1 RS(1)PVSPQLQQQHQAAAAAFLQQR;RS(0.57)PVS(0.43)PQLQQQHQAAAAAFLQQR;RS(1)PVSPQLQQQHQAAAAAFLQQR 241.54 6.0399999999999984e-99 106363300.0 3977.3 3347.0 3590.8 4402.299999999999 5271.9 4987.2 4016.1000000000004 4486.2 4500.6 4749.7 5084.6 True False 4381.07256806649 3629.063436297524 3834.4932812345196 4674.22007265129 4901.619931067663 4946.585896700892 4168.934883194246 4396.719221644184 4311.455433258092 4449.803131411126 4459.226433935037 0.9824736718293132 0.8138325088585069 0.8599010025716002 1.0482132140857743 1.0992085743316329 1.1092923783948296 0.9349009172237474 0.985982498709828 0.9668617409619756 0.9978867853733108 1.0 12.122577744421765 -6.25307033116313 24.681670283921612 1.0011730082724288 0.8782453965123288 0.44539684017684755 0.06372869100607992 403.69531228142273 1190558.2038347793 0.00923893494578296 0.02399496829817401 5.583797614484038e-07 6.25307033116313 -0.12292761176010003 RS(ph)PVSTRPLPSASQK ddPTM_A549_MK2206_60min_R1 6 RSPVSTRPLPSASQK 15 2 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 RS(0.982)PVS(0.009)T(0.009)RPLPSASQK;RS(1)PVSTRPLPSASQK;RS(1)PVSTRPLPSASQK;RS(1)PVSTRPLPSASQK;RS(1)PVSTRPLPSASQK;RS(1)PVSTRPLPSASQK 145.02 2.7966000000000004e-14 451181000.0 23137.4 24430.600000000002 22867.0 20312.9 26465.300000000003 22799.199999999997 20809.4 21770.300000000003 29422.599999999995 31483.899999999998 32452.799999999996 True False 27042.427464880784 25674.013188470446 26109.884448502035 25289.561411880743 22572.28942837093 25211.79621111589 24590.198618763457 24856.306693747592 22758.428078237437 24371.665123481824 24393.874108284876 1.1085745275571617 1.052477891560111 1.070345953766907 1.0367177144401047 0.9253261424639687 1.0335298156906214 1.0080481070619245 1.0189569144863981 0.9329566913894995 0.9990895671304826 1.0 14.57423127720657 -5.733698171205883 0.5644583673965571 0.9734566256426277 1.1491055378541681 0.49698820482834727 0.0366122168965354 1.4071813892373413 0.40999699365215075 0.007424874038665838 0.14499875802192155 1.8462981256350247e-06 5.733698171205883 0.17564891221154044 RS(ph)PVSTRPLPSASQK ddPTM_A549_PD325901_60min_R1 6 RSPVSTRPLPSASQK 15 2 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 RS(1)PVSTRPLPSASQK;RS(0.993)PVS(0.005)T(0.002)RPLPSASQK;RS(0.993)PVS(0.006)T(0.001)RPLPSASQK;RS(1)PVSTRPLPSASQK;RS(1)PVSTRPLPSASQK;RS(1)PVSTRPLPSASQK 131.31 5.032e-10 1032772000.0 32625.1 30159.3 30306.2 29543.000000000004 37496.1 31229.799999999996 29783.0 30873.8 32689.299999999996 34065.7 35737.9 True False 35937.17613467079 32700.930055072557 32362.960977985294 31367.804012978933 34862.50329052262 30975.474863007166 30916.408362882954 30257.997838972446 31315.482401102887 31914.78588831128 31342.36486121362 1.1466006567724978 1.0433459695806224 1.0325628305742387 1.0008116538709813 1.1123124705138376 0.9882941188442202 0.9864095609818584 0.9654025142313659 0.9991422963701121 1.0182634919104663 1.0 14.93582641848019 -7.291549619068764 24.832596258638166 0.994931079453577 1.0602011834896674 0.4746279543576578 0.038532137293646754 456.63981752396455 376600.24648261635 0.0054275487640772216 0.008677545539596336 5.11034688901134e-08 7.291549619068764 0.06527010403609046 RS(ph)QAGVSSGAPPGR ddPTM_A549_MK2206_60min_R1 2 RSQAGVSSGAPPGR 14 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 RS(0.995)QAGVS(0.004)S(0.001)GAPPGR;RS(1)QAGVSSGAPPGR 84.375 0.00010331 5152800.0 657.26 587.75 719.63 494.25 844.92 599.56 621.95 420.29 485.96 996.69 1121.8 True False 768.189419535797 617.6639645167744 821.6843549952121 615.3412721877254 720.633387258756 663.0050412442819 734.9502643488004 479.867394584143 375.89083591865693 771.5370367687327 843.2260998950468 0.911012384022993 0.732501003697173 0.9744531805852358 0.7297464728194664 0.8546146607042293 0.7862719635063521 0.8715933537164906 0.5690850824516347 0.4457770412531617 0.9149823954272325 1.0 9.719775712355167 RS(ph)QAGVSSGAPPGR ddPTM_A549_PD325901_60min_R1 2 RSQAGVSSGAPPGR 14 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 RS(0.996)QAGVS(0.003)S(0.001)GAPPGR;RS(0.991)QAGVS(0.007)S(0.003)GAPPGR 54.974 0.0070693 17870100.0 2978.6 2890.0 3075.8 3265.0 4027.2999999999997 3387.2 3692.7 3373.3999999999996 3658.3 3835.9 3439.3999999999996 True False 3280.985279270575 3133.550442455883 3284.5422842879398 3466.6716346469952 3744.436341430755 3359.6157662225805 3833.2277192229767 3306.1148906188937 3504.5543730809377 3593.7006193612115 3016.375604152962 1.087724378473721 1.0388462359069588 1.0889036099369602 1.1492838059935453 1.2413693892350128 1.1137922484179503 1.2708058353029272 1.0960554402001585 1.1618428315942646 1.1913969249762482 1.0 11.558600371262488 -10.739034596004343 0.9042317552029691 0.9967271822501808 1.140542020560626 0.0 0.08559193169767321 0.5284546836445838 0.7389621984145283 0.05133785291352618 0.01203855852090618 1.8237504161300278e-11 10.739034596004343 0.14381483831044528 RS(ph)QERDNLGMLVWSPNQNLSEAK ddPTM_A549_PD325901_60min_R1 1 RSQERDNLGMLVWSPNQNLSEAK 23 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 RS(0.995)QERDNLGMLVWS(0.005)PNQNLSEAK 64.779 0.00014078 4761300.0 1135.7 1423.0 984.44 1455.4 1309.0 1786.3 1271.0 1760.6 1515.2 1617.5 2207.6 True False 1250.9954279418482 1542.9212040189343 1051.250018318622 1545.29675254678 1217.060355804847 1771.752965045878 1319.3686005178868 1725.4834518360196 1451.5214132499354 1515.3707739557226 1936.0791951294077 0.6461488926119221 0.7969308321170226 0.5429788311156127 0.7981578214539371 0.6286211632595424 0.9151242209012291 0.6814641693568222 0.8912256565624054 0.7497221275356536 0.7827008201771597 1.0 10.918922251780609 -14.999999999999849 0.1488210260977309 1.9647179342035133 0.6475903749648834 0.1866861831914517 0.1170584721133068 33.38652033988504 0.32792999044766186 9.46222843054379 0.17538252001224236 1.0000000000003476e-15 14.999999999999849 -1.3171275592386298 RS(ph)QQGPR ddPTM_A549_PD325901_60min_R1 1 RSQQGPR 7 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 RS(1)QQGPR 41.302 0.04525 11974000.0 244.88 191.08 278.2 235.11 184.01 237.84 126.87 248.27 170.82 249.68 336.82 True False 269.74003732887195 207.18298219531826 297.0803249525019 249.63221072644862 171.08577240003808 235.90310989560066 131.69810727592787 243.31806008595282 163.64102944255143 233.91516218934467 295.3932752778977 0.9131556467394462 0.7013801583682171 1.0057111986487066 0.8450842711013026 0.5791796453019635 0.7986069069232183 0.44583989649740663 0.8237088669572658 0.5539768272944011 0.7918770729268764 1.0 8.206493172838636 -5.242615813432913 22.129505726465744 0.7666913554454994 0.9131562878442456 0.06451619496237315 0.16793724824192385 2335.7094423667754 2745704.96509721 0.026826849510837324 1.045742998526351 5.719844030694226e-06 5.242615813432913 0.14646493239874625 RS(ph)QSFNSIDK ddPTM_A549_MK2206_60min_R1 1 RSQSFNSIDK 10 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 RS(0.819)QS(0.181)FNSIDK 105.0 0.00013834 7725000.0 1999.1 2666.4 2611.5 1970.9 2890.4 2453.6 2106.6 2523.2 3229.9 3438.8 3158.3 True False 2336.499206697519 2802.108370884776 2981.849968831199 2453.7705884770617 2465.225988889727 2713.238323432136 2489.341951727926 2880.871326975919 2498.3328070904404 2661.972691649677 2374.006945354365 0.984200661783975 1.1803286323016668 1.2560409625870332 1.0335987404244051 1.0384240845267392 1.1428940124802938 1.0485824216307609 1.2135058545693913 1.0523696284795483 1.121299454013319 1.0 11.213108440372169 -8.973330725154051 11.637613078897573 1.0230590081659587 1.1143338454090155 0.04388498300256671 0.0846429949703896 0.6300625007718628 271.5892240049349 0.013683740470581351 0.014239512853448462 1.0633329575222634e-09 8.973330725154051 0.09127483724305674 RS(ph)QSIEQESQEK ddPTM_A549_PD325901_60min_R1 1 RSQSIEQESQEK 12 1 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 RS(0.623)QS(0.377)IEQESQEK 102.73 0.00016573 4950800.0 1509.3 1704.4 1832.9 1339.0 1805.7 1491.0 1572.5 1274.4 1822.1 1762.7 1669.9 True False 1662.5230249120657 1848.0357695923196 1957.2916161230798 1421.7069889103607 1678.8738613268235 1478.857790339475 1632.3423480050178 1248.9810922525403 1745.5234735234342 1651.4028211757354 1464.512886368271 1.13520546004537 1.2618774384260398 1.336479613352404 0.9707712387809292 1.1463701528022259 1.0097950001701772 1.1145974632240578 0.852830387412834 1.1918799006624101 1.1276123525760964 1.0 10.516205172326487 -6.259881875852817 24.99989224763267 1.0689379276719781 1.2462564966593268 0.41285856337077986 0.10087977896285315 116.29126016961222 1866600.1985469882 0.014728769186718772 0.03684436832239616 5.496903643038251e-07 6.259881875852817 0.17731856898734866 RS(ph)QSLPTTLLSPVR ddPTM_A549_MK2206_60min_R1 2 RSQSLPTTLLSPVR 14 1 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 RS(0.5)QS(0.5)LPTTLLSPVR;RS(0.5)QS(0.5)LPTTLLSPVR 72.433 0.00059524 4467600.0 800.4100000000001 879.9200000000001 600.53 751.81 1057.71 1023.8299999999999 833.9300000000001 863.3499999999999 1071.79 1015.64 1072.25 True False 935.499639854315 924.7041695578046 685.6941841019337 936.0034837500335 902.122260139965 1132.171011036649 985.444286435236 985.7325063984866 829.031276296932 786.2062186073853 805.9807324054773 1.1606972750605142 1.1473030711267664 0.8507575386516447 1.1613224065003376 1.119285144010267 1.404712253675898 1.22266481916279 1.2230224207178426 1.0285993733654892 0.9754652772665243 1.0 9.654601540196301 -8.8506712366258 6.842649419434505 1.012710798083503 1.1589975966525794 0.24941565446935465 0.12318816181285648 0.25394731947023574 16.410270559647174 0.022486897105972736 0.02388440531573473 1.4103560419007914e-09 8.8506712366258 0.14628679856907634 RS(ph)QSSSQFR ddPTM_A549_MK2206_60min_R1 1 RSQSSSQFR 9 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 RS(0.49)QS(0.49)S(0.01)S(0.01)QFR 50.786 0.011464 8930100.0 1130.1 1045.0 894.54 1312.3 1550.5 1022.2 1317.2 1370.7 1876.9 1761.5 2052.1 True False 1320.8332517077015 1098.1860364441156 1021.3992230971708 1633.813558911385 1322.4235039349294 1130.3685255185553 1556.5181898870333 1565.000922592698 1451.7851467934129 1363.5759265851182 1542.5069349212208 0.8562899924823737 0.7119488487098454 0.6621683183222355 1.0591936554209576 0.8573209455310932 0.7328126051999149 1.0090834307766194 1.014582746542158 0.941185490921348 0.883999867822156 1.0 10.591061260230598 -6.829801814451029 0.47523611956767 0.9835449160634969 0.7311243978243573 0.270666612284459 0.1102310723675432 1.2089933600042022 0.4191812039791454 0.025837635330191292 0.1342480017627419 1.4797835171772848e-07 6.829801814451029 -0.2524205182391396 RS(ph)QSTTFNPDDMSEPEFK ddPTM_A549_PD325901_60min_R1 2 RSQSTTFNPDDMSEPEFK 18 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 RS(0.393)QS(0.267)T(0.267)T(0.074)FNPDDMSEPEFK;RS(0.512)QS(0.404)T(0.07)T(0.013)FNPDDMS(0.002)EPEFK 97.352 4.5464e-07 34376000.0 11635.400000000001 10055.3 10390.3 10442.0 12614.5 9811.0 9505.7 10528.7 10722.0 11873.2 12919.2 True False 12816.617242471242 10902.695420078413 11095.448239949605 11086.978624497373 11728.501037662516 9731.102468826683 9867.444615218636 10318.696818894636 10271.391626759374 11123.524125707005 11330.220301556366 1.1311887060757944 0.962266851826418 0.979279126499022 0.9785316021590877 1.035152073437746 0.8588626001817439 0.870896094920873 0.9107234055702532 0.9065482712060288 0.9817570911819808 1.0 13.4678882923295 -2.00000268815237 0.973454129110368 0.9451887985384315 150.2736224812736 0.5013628801197798 0.05255189920075814 1067.552992177394 1.5667015503948085 0.008827447871490708 355360.05698370945 0.009999938103195813 2.00000268815237 149.32843368273518 RS(ph)QVIEK ddPTM_A549_MK2206_60min_R1 2 RSQVIEK 7 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 RS(1)QVIEK;RS(1)QVIEK 96.14299999999999 0.0049378 6696800.0 2684.3 3066.2 3071.3 2575.2 3480.9 2525.74 2519.6 2589.6099999999997 3537.2999999999997 3600.9 3815.4 True False 3137.344215165901 3222.2564832009066 3506.856522791984 3206.1241156051224 2968.8642211203487 2793.0121303494793 2977.378705769332 2956.6951478480164 2736.107197907367 2787.4541890663377 2867.930880316957 1.0939399679043762 1.1235474694720642 1.22278278980155 1.1179223800717224 1.035193784304954 0.9738770726722682 1.038162644087252 1.030950629996093 0.954035265175212 0.9719391105960946 1.0 11.485794538888237 -6.829070965952554 2.700851267434029 0.9871479825429644 1.1477883802807407 0.7638096686104827 0.03767718262895341 0.09554274064484572 1.4180868462843406 0.00591387016240256 0.012415758040495634 1.4822758538555423e-07 6.829070965952554 0.16064039773777627 RS(ph)QVIEK ddPTM_A549_PD325901_60min_R1 1 RSQVIEK 7 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 RS(1)QVIEK 50.034 0.022239 7969200.0 2494.9 2454.2 3019.9 2762.6 2722.1 3041.2 2681.1 2744.2 2866.8 3056.9 2920.9 True False 2748.180411351693 2661.0240470156505 3224.8485741339314 2933.2395276801803 2530.909086735197 3016.4334755066475 2783.1307276542143 2689.4647782167463 2746.3183655655444 2863.8868123061834 2561.647817110654 1.0728174236111165 1.038793869024933 1.2588961498116154 1.145059640161095 0.9880004073276052 1.1775363714552132 1.086461108769189 1.0498963832000372 1.0720905298618233 1.1179861623353176 1.0 11.32285642801012 -9.665671534052917 0.35421076758957837 0.9876633115657738 1.1199137821357483 0.0 0.07632984019132733 1.5901664057910823 0.4402283597453817 0.08114103167392993 0.03272718484129553 2.1593769734092804e-10 9.665671534052917 0.13225047056997452 RS(ph)RPTSFADELAAR ddPTM_A549_MK2206_60min_R1 2 RSRPTSFADELAAR 14 2 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RS(0.835)RPT(0.133)S(0.032)FADELAAR;RS(0.635)RPT(0.297)S(0.068)FADELAAR 107.65 5.5248e-06 18530700.0 3038.8 3406.8999999999996 2589.5 2572.0 3985.2 2796.5 2388.25 2933.8 4111.5 4009.7 4171.6 True False 3551.6751484730216 3580.2966579535455 2956.7300380196803 3202.1401154614673 3398.982359162518 3092.4237738335355 2822.1641109912725 3349.6751343856845 3180.2518147163487 3103.905985142405 3135.676589697075 1.1326662832968162 1.141793981470335 0.9429320765204673 1.021195912226016 1.0839709587176782 0.9862062254743822 0.9000175975622251 1.0682463699833544 1.0142155046109458 0.9898680225317052 1.0 11.61456105377695 -5.745071216721852 24.999622244015093 1.0053870605662114 1.1372302482923988 0.5368016814809872 0.04874550326556203 134.12101123978817 204843.8322607551 0.0062803824112597955 0.02417905930908557 1.7985759558519717e-06 5.745071216721852 0.13184318772618742 RS(ph)RPTSFADELAAR ddPTM_A549_PD325901_60min_R1 1 RSRPTSFADELAAR 14 2 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RS(0.788)RPT(0.16)S(0.052)FADELAAR 46.513999999999996 0.010983 8605400.0 1276.3 1407.5 1395.0 1497.0 1358.7 1429.5 1469.7 1589.8 1947.9 2074.4 2316.8 True False 1405.8690364375996 1526.114964621679 1489.6730888164636 1589.4662900663245 1263.269599260539 1417.8586259492154 1525.6302377506997 1558.0901918260267 1866.036537004718 1943.422029980681 2031.8482874052418 0.6919163429435744 0.7510969072255852 0.7331615741443179 0.7822760685031961 0.6217342146513257 0.6978171720487469 0.7508583427254776 0.766833922337664 0.9183936362629355 0.9564798917455176 1.0 10.988576968672119 -8.789494054956347 1.3633140599727613 0.9734973793973904 0.7147589288635762 0.865571204483317 0.041594462346578605 0.09185243692589233 0.33671998457058094 0.0088950040823562 0.00939033900103028 1.6237005771170034e-09 8.789494054956347 -0.2587384505338143 RS(ph)RSESETSTMAAK ddPTM_A549_PD325901_60min_R1 1 RSRSESETSTMAAK 14 2 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 RS(0.448)RS(0.448)ES(0.098)ET(0.005)STMAAK 75.911 0.00031795 13246000.0 1174.3 1553.3 1291.9 1433.9 1501.9 1004.9 1200.7 1268.8 1363.4 1643.2 1504.4 True False 1293.51407152603 1684.2020423068243 1379.5761028257991 1522.4687463768234 1396.4117252737205 996.7164275735332 1246.3932955482508 1243.4927886456553 1306.1010393512151 1539.448071569734 1319.3683371773323 0.9804040578185959 1.2765214950587798 1.0456337809176746 1.1539376105038308 1.0583941465968598 0.7554497099012674 0.944689409641886 0.9424910039193409 0.9899442047741563 1.1668068940196354 1.0 10.365631672629219 -7.006851237177716 24.66713162123776 0.9689582074929686 1.1189986449282867 0.2778207295928453 0.11202618044609239 222.68508566878452 801759.5161623852 0.013311383046470726 0.0244896638435471 9.843482257324445e-08 7.006851237177716 0.15004043743531814 RS(ph)RSPLELEPEAK ddPTM_A549_MK2206_60min_R1 1 RSRSPLELEPEAK 13 2 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 RS(0.5)RS(0.5)PLELEPEAK 52.522 0.0049082 3216200.0 563.54 380.21 597.42 438.38 622.47 785.79 689.93 553.71 742.95 670.74 756.6 True False 658.6517747698059 399.56106499178674 682.1431393372144 545.7831196796259 530.905487581023 868.9417762348135 815.2813504014273 632.2000881657567 574.6730112473582 519.219368150839 568.7153389022935 1.1581396345685053 0.7025677657349632 1.1994456500045412 0.9596771571750987 0.9335170888932778 1.5279028308116365 1.4335490791844008 1.1116283400866211 1.0104756667132697 0.9129688134542157 1.0 9.15156290572276 -4.913544244836162 20.436376795101104 1.0578765700181405 7.019786926320611 0.0020092123358650404 0.2262205540406441 2626.8980047630084 626077.8547400351 0.0303158409673232 5987.794487866137 1.2202694964056495e-05 4.913544244836162 5.961910356302471 RS(ph)S(ph)RS(ph)SPELTR ddPTM_A549_PD325901_60min_R1 1 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 RS(0.942)S(0.942)RS(0.806)S(0.308)PELT(0.002)R 41.996 0.024435 12713000.0 796.01 807.49 836.71 859.78 989.93 664.65 675.5 806.38 719.2 932.52 1029.5 True False 876.8203492084093 875.540016186402 893.4941721459655 912.8866578979458 920.400731873103 659.2373107640054 701.2065221477836 790.2961183071274 688.9745250853709 873.6405280551409 902.8780265381971 0.9711393160937831 0.9697212585219134 0.9896067307915212 1.0110852530082315 1.019407610795548 0.7301510186172593 0.7766348294424003 0.8753077326926099 0.7630870447994265 0.967617443748013 1.0 9.818387291108529 -7.2177946154858 24.9976254546839 0.8652872440549368 0.9918496800985072 0.4379060513425025 0.07824113489086686 490.09283680098025 280701.71488987096 0.014803610897698848 0.025640514809574664 6.056272174304311e-08 7.2177946154858 0.12656243604357031 RS(ph)S(ph)RSSPELTR ddPTM_A549_MK2206_60min_R1 3 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RS(0.573)S(0.624)RS(0.42)S(0.37)PELT(0.012)R;RS(0.5)S(0.5)RS(0.5)S(0.5)PELTR;RS(0.479)S(0.521)RS(0.521)S(0.479)PELTR 50.563 0.0083053 120898900.0 1773.85 2054.99 1162.33 1174.68 1739.1399999999999 1542.6299999999997 1155.8100000000002 986.38 2166.2 2436.6699999999996 2219.21 True False 2073.232513531286 2159.580213428032 1327.1658718252218 1462.4766527333886 1483.3148098248264 1705.8700826850807 1365.8057159530294 1126.2023856620592 1675.5591587105823 1886.2245546591876 1668.1189099198505 1.242856550095041 1.2946200661029585 0.7956062747882818 0.8767220634191225 0.8892140728121694 1.0226309842426307 0.8187699976488207 0.6751331568540104 1.0044602628424668 1.1307494588319347 1.0 10.70400641795134 -5.747773529040108 24.99993744195801 0.943283077942443 1.2687385274604428 0.544846180805478 0.12295940255551195 139.4026084015326 255014.818223852 0.016735494823311645 0.06411851378259617 1.78741941506872e-06 5.747773529040108 0.32545544951799976 RS(ph)S(ph)RSSPELTR ddPTM_A549_PD325901_60min_R1 1 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RS(0.508)S(0.545)RS(0.446)S(0.489)PELT(0.012)R 42.208999999999996 0.025495 14503000.0 341.35 240.63 235.98 252.51 198.4 326.95 189.37 238.28 224.58 297.96 425.17 True False 376.0036007114115 260.90873459105836 251.99502186301712 268.1069692081813 184.46506844284312 324.2874275999271 196.57657897724016 233.5273184729561 215.14168359798737 279.1467547498284 372.8767853746918 1.0083856530075415 0.699718364952325 0.6758131150744487 0.7190229580497195 0.49470783829430454 0.8696905796215262 0.5271891055907563 0.6262854852663785 0.5769779509920374 0.7486300185443909 1.0 8.542555170132859 -10.864963247598778 1.1054988219976187 1.0005036594031738 0.6754173345941099 0.09978895958591749 0.15779808523804684 0.3800536893096235 0.8225452075696812 0.09497651831514693 0.022890612108383643 1.3646986200480598e-11 10.864963247598778 -0.32508632480906385 RS(ph)SAIGIENIQEVQEK ddPTM_A549_MK2206_60min_R1 2 RSSAIGIENIQEVQEK 16 1 J3KPC5;P47736-3;F2Z357;P47736;A0A0A0MQY8;X6R8W7;P47736-2;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 RS(0.5)S(0.5)AIGIENIQEVQEK;RS(0.5)S(0.5)AIGIENIQEVQEK 180.44 1.0441999999999999e-29 85252000.0 11014.4 10992.4 11701.5 9765.400000000001 14764.4 9751.6 10249.599999999999 11651.4 15878.8 16171.4 14632.400000000001 True False 12873.36144377427 11551.866207663441 13360.94865413681 12157.92343838547 12592.576318282416 10783.507839411805 12111.819647028646 13303.021630915995 12282.277153233117 12518.26950847493 10998.771246304408 1.1704363292490265 1.0502869774243986 1.2147673912780115 1.1053892445004287 1.144907557061297 0.9804284131316093 1.101197522504909 1.2095007099439237 1.1166953906201085 1.138151637864191 1.0 13.42505473821929 -10.500581982892006 0.8114383037953473 0.9993120211910773 1.1196095616551212 0.0 0.07563000376998648 0.5958426165451307 0.7029339634173016 0.04267693256290537 0.012094581095477898 3.158042840240823e-11 10.500581982892006 0.12029754046404384 RS(ph)SAIGIENIQEVQEK ddPTM_A549_PD325901_60min_R1 2 RSSAIGIENIQEVQEK 16 1 J3KPC5;P47736-3;F2Z357;P47736;A0A0A0MQY8;X6R8W7;P47736-2;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 RS(0.668)S(0.332)AIGIENIQEVQEK;RS(0.642)S(0.358)AIGIENIQEVQEK 180.45 1.0098e-29 109955000.0 16235.8 17220.9 16576.3 16832.1 20827.6 18496.8 17250.5 17143.5 22854.0 21586.4 20139.9 True False 17884.046463835755 18672.165679753798 17701.26739938949 17871.7805885273 19364.741227319355 18346.1681933945 17906.977217335803 16801.559443684433 21893.525856925815 20223.43102004194 17662.819977344952 1.0125249811057666 1.0571452182439425 1.0021767431301374 1.0118305350702985 1.0963561454035853 1.0386885116264581 1.0138232309622142 0.9512387866283409 1.2395260714318177 1.1449718134466258 1.0 14.108428076020756 -8.737665168542822 24.9998875313952 1.1131095931275807 1.0257124505047768 0.35486728443812465 0.0621912914777065 306.0466455118241 321824.80728115275 0.015069947691058213 0.01708338776113623 1.8295101845059229e-09 8.737665168542822 -0.08739714262280396 RS(ph)SDEDAAGEPK ddPTM_A549_MK2206_60min_R1 3 RSSDEDAAGEPK 12 1 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RS(0.876)S(0.124)DEDAAGEPK;RS(0.601)S(0.399)DEDAAGEPK;RS(0.651)S(0.349)DEDAAGEPK 136.36 1.2582e-08 40975000.0 4940.52 5192.32 5334.26 4584.97 6516.4 4542.17 3385.85 3954.8500000000004 5631.5 6781.9 7137.150000000001 True False 5774.358991882959 5456.58690980814 6090.738278666483 5708.287855827127 5557.84619222288 5022.819414551572 4001.0151178477117 4515.462098720164 4355.974241657575 5249.864079765886 5364.798679680815 1.0763421587008202 1.017109352206444 1.135315347756695 1.0640264801449637 1.0359841112534627 0.9362549676981373 0.7457903561230664 0.8416834197008147 0.8119548377753363 0.9785761578807711 1.0 12.38930831784786 -7.265823348923527 3.2021977683029497 0.8898856566982083 1.070436425606254 0.6132004636703952 0.07209428391213209 0.17180353660684602 3.6471778391965035 0.013450761965754381 0.023258601908603967 5.4222139634797006e-08 7.265823348923527 0.18055076890804567 RS(ph)SDEDAAGEPK ddPTM_A549_PD325901_60min_R1 4 RSSDEDAAGEPK 12 1 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RS(0.678)S(0.322)DEDAAGEPK;RS(0.607)S(0.393)DEDAAGEPK;RS(0.648)S(0.352)DEDAAGEPK;RS(0.63)S(0.37)DEDAAGEPK 137.32 9.7022e-09 60694700.0 5098.2 5449.17 5420.6 5706.2 6143.9 5331.4 5638.6 5649.8 6409.1 5235.95 6526.4 True False 5615.765510903524 5908.390679763781 5788.474512715788 6058.659014279533 5712.373659304351 5287.982846020036 5853.180008560314 5537.110306817645 6139.747815245616 4905.351223427182 5723.6941742582685 0.9811435307217946 1.0322687585818555 1.01131792448815 1.0585224908639834 0.9980221663475959 0.923875854479123 1.0226227730482866 0.9674014959989014 1.072689704991316 0.8570253885136805 1.0 12.482730873381435 -8.756502629534847 24.99998056615139 1.0343256933067315 1.001071836005144 0.0 0.06496716243743103 201.49325619000453 1020368.826188944 0.00709445070681197 0.00791696815939568 1.7518518271905997e-09 8.756502629534847 -0.033253857301587475 RS(ph)SDLVK ddPTM_A549_PD325901_60min_R1 1 RSSDLVK 7 1 A0A087WVT1;Q96MX3 A0A087WVT1 ZNF48 Zinc finger protein 48 1 RS(0.592)S(0.408)DLVK 45.137 0.030839 3869700.0 1904.2 1835.7 1971.4 2194.9 2167.0 2271.2 2003.8 2444.4 2336.2 2311.9 2340.4 True False 2097.5129822020504 1990.40088138971 2105.191058991237 2330.4739880204256 2014.7973957441582 2252.70410021396 2080.0557055214335 2395.644524405295 2238.0176383543403 2165.9262394486773 2052.5456370179663 1.021908085439413 0.9697230821534653 1.0256488435744386 1.1354066608751494 0.981609061161412 1.0975171804154342 1.01340290223385 1.1671577387608292 1.0903619378742957 1.0552390165586942 1.0 11.003198584408182 -6.000419807067616 24.987761158613132 1.0557334112195242 0.9962831599670121 0.1892080549244184 0.055155193490842844 22.419743844618655 1334808.6457161927 0.007936218859679819 0.02428792215229122 9.990338255515627e-07 6.000419807067616 -0.05945025125251213 RS(ph)SDPALIGLSTSVSDSNFSSEEPSR ddPTM_A549_MK2206_60min_R1 3 RSSDPALIGLSTSVSDSNFSSEEPSR 26 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.619)S(0.381)DPALIGLSTSVSDSNFSSEEPSR;RS(0.612)S(0.388)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR 168.57 2.9671e-48 517172600.0 6655.400000000001 7845.400000000001 6343.64 6798.499999999999 9461.4 7716.5 6230.200000000001 6273.74 10977.2 10000.8 11023.4 True False 7778.66881109233 8244.697349587235 7243.263540599793 8464.132805196257 8069.640593440793 8533.054908201859 7362.146694984959 7163.06185752295 8490.881726986334 7741.612334142747 8285.985549637251 0.9387741222204845 0.9950171045070404 0.8741583601864829 1.0214998269658828 0.9738902566387013 1.0298177394933332 0.8885058573759236 0.8644791635964824 1.0247280394253226 0.9343019352093445 1.0 13.016457588990207 RS(ph)SDPALIGLSTSVSDSNFSSEEPSR ddPTM_A549_PD325901_60min_R1 6 RSSDPALIGLSTSVSDSNFSSEEPSR 26 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR 132.73 2.9323e-24 24243200.0 8862.3 9702.199999999999 9374.4 10018.300000000001 11745.2 10619.51 9665.4 11163.2 10141.9 11106.300000000001 11624.4 True False 9761.994171919561 10519.838443873865 10010.603156846628 10637.107637789895 10920.257670740326 10533.028231447324 10033.222086109821 10940.541218639015 9715.671212407278 10405.04632258699 10194.672493142902 0.9575583892945686 1.031895674034617 0.9819445561963779 1.043398661893708 1.071172975697401 1.033189466216988 0.9841632571186888 1.0731625980135995 0.9530145494072706 1.0206356633413765 1.0 13.315527808645205 -8.784377659033638 24.999859279826804 0.9778124285768184 1.022507398074457 0.08830655592212433 0.037956952734190384 245.68800748689793 267767.867610726 0.0063201842977261705 0.0067304484371799676 1.6429424121677847e-09 8.784377659033638 0.044694969497638626 RS(ph)SDPALIGLSTSVSDSNFSSEEPSRK ddPTM_A549_MK2206_60min_R1 2 RSSDPALIGLSTSVSDSNFSSEEPSRK 27 2 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSRK;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSRK 188.64 2.0043999999999998e-58 89424000.0 7193.7 8382.3 7397.9 6242.6 10440.4 8921.1 7140.0 7091.1 11869.1 11235.1 11342.900000000001 True False 8407.820690920888 8808.923266301921 8447.033461388603 7772.037280240961 8904.63099031425 9865.124880653086 8437.24557834301 8096.285140582972 9180.767801057964 8697.08310688417 8526.14488188584 0.9861221932533263 1.0331660308771968 0.9907213140765044 0.9115535084036616 1.0443912358600098 1.1570440119557392 0.9895733294737108 0.9495833407410044 1.0767783011244505 1.0200487122100745 1.0 13.057677855399346 RS(ph)SDPALIGLSTSVSDSNFSSEEPSRK ddPTM_A549_PD325901_60min_R1 4 RSSDPALIGLSTSVSDSNFSSEEPSRK 27 2 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.6)S(0.4)DPALIGLSTSVSDSNFSSEEPSRK;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSRK;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSRK;RS(0.587)S(0.413)DPALIGLSTSVSDSNFSSEEPSRK 188.74 1.9719999999999996e-58 156535000.0 11208.5 11667.900000000001 11512.099999999999 11676.1 11724.5 11147.2 11253.1 13398.900000000001 12159.7 12678.4 13528.3 True False 12346.378668738405 12651.194881498614 12293.380333881001 12397.306178652912 10901.0115673292 11056.420899042385 11681.342878432593 13131.6484282663 11648.670095495807 11877.883660290721 11864.404862959394 1.0406235130498396 1.0663151694187016 1.0361565098187828 1.0449159752932262 0.9187996948217856 0.9318984834680135 0.9845704873829517 1.106810546331172 0.9818166380905367 1.001136070244316 1.0 13.534352114064356 -6.572415258577172 24.999985153866287 0.9904802002064435 1.048056571715171 0.269685805869859 0.04567380014916361 115.45228652541401 58265.843326328635 0.006668611744953061 0.01388182915291556 2.676607813573659e-07 6.572415258577172 0.05757637150872763 RS(ph)SDPLGDTASNLGSAVDELMR ddPTM_A549_MK2206_60min_R1 2 RSSDPLGDTASNLGSAVDELMR 22 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 RS(0.488)S(0.488)DPLGDT(0.02)AS(0.004)NLGSAVDELMR;RS(0.491)S(0.491)DPLGDT(0.008)AS(0.009)NLGSAVDELMR 43.732 0.013153 9661400.0 726.3599999999999 868.48 761.46 684.6500000000001 1148.71 1058.15 953.25 887.86 1531.8 1443.85 1264.68 True False 848.9518102029961 912.6819224219956 869.4464779882078 852.3892807351061 979.7362806869354 1170.1227306568778 1126.443185932139 1013.7168739572137 1184.8497457819535 1117.683282202624 950.6250526076558 0.8930459047699614 0.960086124301502 0.9146050544357448 0.8966619156489938 1.030623249407771 1.230898267878717 1.1849500313948145 1.0663687761820404 1.2463901961470476 1.1757351430374272 1.0 9.892732612450704 -6.968448982626267 4.483340258272808 1.1280959377915611 0.9210078772871648 0.7068755425159755 0.06979384428797668 0.12907844895247655 6.0956921366903325 0.013991069989177474 0.026568215483515786 1.0753529166636089e-07 6.968448982626267 -0.20708806050439632 RS(ph)SDSWEVWGSASTNR ddPTM_A549_PD325901_60min_R1 1 RSSDSWEVWGSASTNR 16 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 RS(0.459)S(0.459)DS(0.082)WEVWGSASTNR 143.02 1.1959e-14 16943000.0 3635.3 3947.6 3920.9 4717.3 4692.9 3884.8 3374.1 4334.7 4140.1 4531.3 4906.3 True False 4004.3529798335862 4280.278106103402 4186.995852287073 5008.676907234386 4363.2868936261 3853.163476801335 3502.5032218783635 4248.241007993636 3966.1059945855727 4245.192944683505 4302.856203598209 0.9306267256816524 0.9947527650410614 0.9730736176555821 1.1640353918975828 1.0140443201372515 0.895489715314952 0.8139949503656292 0.987307222686433 0.921737982149849 0.9865988412844279 1.0 12.071078912579692 -7.136813013151646 8.507741703543903 0.9476083496131756 1.0206240104008801 0.2221487197826988 0.07304026267962803 0.43038442126804033 28.00905011616753 0.011298535355224447 0.019606421994823816 7.297716480901846e-08 7.136813013151646 0.0730156607877045 RS(ph)SDTEEESR ddPTM_A549_MK2206_60min_R1 1 RSSDTEEESR 10 1 C9J8Q2;C9JVB3;F8WDM0;C9J367;C9J713;Q96IZ7-2;Q96IZ7 C9J8Q2 RSRC1 Serine/Arginine-related protein 53 1 RS(0.5)S(0.5)DT(0.001)EEESR 58.674 0.0086182 10545000.0 401.59 310.37 188.36 173.52 0.0 0.0 0.0 0.0 152.03 379.34 525.25 True False 469.36857406715836 326.16650730254565 215.07228034809293 216.03240778960887 0.0 0.0 0.0 0.0 117.59544774202276 293.6468305369281 394.8159288374698 1.188828868807821 0.8261229689058862 0.5447406364311854 0.5471724720573291 0.0 0.0 0.0 0.0 0.29784879269760206 0.743756290182028 1.0 8.625036386233791 -10.616933793869975 1.0042126111837668 0.9828766132117862 0.36068090733889213 0.1942785407691887 0.3754151750929346 0.5730419606461287 1.0699297315668002 0.23762186701800106 0.07195937669756981 2.415829088039567e-11 10.616933793869975 -0.6221957058728941 RS(ph)SDTEEESR ddPTM_A549_PD325901_60min_R1 1 RSSDTEEESR 10 1 C9J8Q2;C9JVB3;F8WDM0;C9J367;C9J713;Q96IZ7-2;Q96IZ7 C9J8Q2 RSRC1 Serine/Arginine-related protein 53 1 RS(0.478)S(0.478)DT(0.044)EEESR 56.225 0.012549 36479000.0 143.5 123.45 115.7 231.48 220.59 196.85 0.0 182.75 114.23 193.1 208.19 True False 158.06801436088338 133.85356474781267 123.5520977606199 245.77799387077684 205.09651939418723 195.24691886540947 0.0 179.1049078853984 109.42931034552537 180.90763304534784 182.58394982514548 0.8657278720953283 0.7331069618988949 0.6766865207973735 1.3461095244469745 1.1232998277811455 1.0693542288486524 0.0 0.9809455215363736 0.5993369649978662 0.9908189258617583 1.0 7.512416139514225 RS(ph)SEEREAGEI ddPTM_A549_MK2206_60min_R1 1 RSSEEREAGEI 11 2 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 RS(0.5)S(0.5)EEREAGEI 48.111999999999995 0.010143000000000001 30443000.0 220.54 184.85 277.5 104.14 276.15 172.22 199.52 178.9 107.06 339.25 139.08 True False 257.7617603146768 194.2580754418131 316.85367273622757 129.65430467502225 235.52870081369295 190.44420608961622 235.77020137128812 204.25962285827208 82.81108093968926 262.6131893806424 104.54259758727332 2.4656146514773023 1.8581715006616735 3.030857086478214 1.2402055015591649 2.2529447923567325 1.8216900142607542 2.255254860818477 1.9538410903531824 0.7921276384065132 2.5120208933148995 1.0 6.707947101513649 -8.715499202812591 5.449095796613048 0.9010702793843866 2.110964937565217 0.03255421969375105 0.6429556658076129 0.08126160122049567 5.499072494303138 0.06571269124937673 0.07377442835197556 1.9253105791588363e-09 8.715499202812591 1.2098946581808305 RS(ph)SEEREAGEI ddPTM_A549_PD325901_60min_R1 1 RSSEEREAGEI 11 2 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 RS(0.5)S(0.5)EEREAGEI 42.208999999999996 0.026465 34773000.0 146.58 136.69 141.67 95.295 109.12 0.0 196.15 0.0 147.45 0.0 186.28 True False 161.4606936935073 148.20934601359676 151.28457813091632 101.18115571935233 101.4557876435637 0.0 203.61459558739847 0.0 141.2531892711872 0.0 163.36874092621213 0.9883206100390611 0.9072074937551099 0.9260313648327999 0.6193422018539781 0.621023257376928 0.0 1.2463497878052692 0.0 0.864628009436556 0.0 1.0 7.351988153521878 -8.982657942277651 24.955982669890112 0.9402774651009272 0.6596690175469619 0.0 0.4617717910985941 169.1008033303354 243347.44443373286 0.061312938111235164 0.06207560003432373 1.0407395472802563e-09 8.982657942277651 -0.2806084475539653 RS(ph)SFLNAK ddPTM_A549_PD325901_60min_R1 1 RSSFLNAK 8 1 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8T6 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 RS(0.668)S(0.332)FLNAK 93.096 0.0010744 23199000.0 1934.3 1710.8 1947.5 1934.0 2363.3 2284.8 2450.6 2266.9 2196.0 2226.8 2379.6 True False 2130.6687120436004 1854.9751200531211 2079.6690612688603 2053.4587875673164 2197.3099609423944 2266.1933463230253 2543.858924019775 2221.684901151353 2103.709756795709 2086.199467971936 2086.9242855272396 1.0209611948165667 0.8888559747554431 0.996523484676136 0.9839642011969455 1.0528939531638384 1.0859010851706559 1.2189512296451597 1.0645737924268142 1.0080431625549984 0.9996526862232951 1.0 11.027162544538916 -6.441785135617245 2.3344027357726267 1.0339359882384132 0.9588347883637013 0.21872420517159952 0.0685104366752407 0.4595872499949064 4.883136603171091 0.011116426163403631 0.02971850844264595 3.6158871206758416e-07 6.441785135617245 -0.07510119987471187 RS(ph)SFSEGQTLTVTSGAK ddPTM_A549_MK2206_60min_R1 2 RSSFSEGQTLTVTSGAK 17 1 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357;H7C3H3 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 RS(0.484)S(0.484)FS(0.032)EGQTLTVTSGAK;RS(0.487)S(0.487)FS(0.027)EGQTLTVTSGAK 150.91 3.7227e-17 27121000.0 6152.2 6813.2 5437.4 5661.8 7638.6 6182.0 5307.299999999999 5537.299999999999 8395.6 8060.200000000001 9202.900000000001 True False 7190.540953151153 7159.962778469905 6208.505081571036 7048.941254167859 6514.97205879223 6836.175136720514 6271.567711196058 6322.229232270041 6494.010005018261 6239.395221947983 6917.565942881202 1.0394611359723815 1.0350407697722277 0.8974985034960377 1.0189915517063997 0.9418012220753346 0.9882341842733792 0.9066148068527001 0.9139384119317553 0.9387709576807405 0.901963967306865 1.0 12.756048776300243 -5.652559543355463 10.866758780899461 0.9611560221051249 1.0382237784869135 0.37587806857245154 0.04180715095730953 0.2825133748287717 26.439390617593162 0.005450841224565417 0.02114027796632285 2.2255658906839847e-06 5.652559543355463 0.07706775638178864 RS(ph)SFSEGQTLTVTSGAK ddPTM_A549_PD325901_60min_R1 1 RSSFSEGQTLTVTSGAK 17 1 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357;H7C3H3 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 RS(0.491)S(0.491)FS(0.018)EGQTLTVTSGAK 101.71 6.8162e-09 33518000.0 3243.6 4041.1 3604.5 3724.6 3784.9 4388.7 4286.5 4307.8 4507.7 5079.1 4605.3 True False 3572.8878841878836 4381.657679241682 3849.123045619313 3954.660082819662 3519.061681196152 4352.959882268845 4449.625103162802 4221.877549596276 4318.257044949005 4758.404759195369 4038.877295401999 0.884624023674942 1.084870214856469 0.9530180701457038 0.9791483606896865 0.8712970025611763 1.0777648251964496 1.1016985111749773 1.0453096840556684 1.0691726262308245 1.1781503648582008 1.0 11.979738601041266 -7.292558759006345 24.998690483575793 1.0430507196412495 0.963106054928141 0.3812277182390228 0.07084640459851559 639.3831542519654 513625.1547931447 0.008801955784757624 0.014071791710608919 5.09848611608479e-08 7.292558759006345 -0.07994466471310846 RS(ph)SFSMEEES ddPTM_A549_MK2206_60min_R1 2 RSSFSMEEES 10 1 P19532 P19532 TFE3 Transcription factor E3 1 RS(0.707)S(0.281)FS(0.011)MEEES;RS(0.498)S(0.498)FS(0.004)MEEES 107.03 0.00022281 24278000.0 1581.26 2373.6099999999997 2514.48 2020.11 1980.85 1582.88 1682.3600000000001 1487.5 2080.45 2878.4 2881.6000000000004 True False 1848.138029904716 2494.4166104919764 2871.071073952392 2515.037040686184 1689.4695890161272 1750.3793109692933 1988.0230351794332 1698.3576802776956 1609.2313967959699 2228.1674408643785 2166.019191885869 0.8532417611201375 1.1516133466574616 1.3255058333313574 1.1611333131801287 0.7799882823499691 0.8081088651136585 0.9178233704607845 0.78409170456103 0.742944200505848 1.0286923814947362 1.0 11.080830310579659 -6.753981085879392 24.989115118520523 0.8606356947186862 1.1394001967884422 0.45833002778881426 0.1338427615360221 117.42841640177856 393441.99772919854 0.020183700468249147 0.04136585811381773 1.7620527845571753e-07 6.753981085879392 0.278764502069756 RS(ph)SFSMEEES ddPTM_A549_PD325901_60min_R1 2 RSSFSMEEES 10 1 P19532 P19532 TFE3 Transcription factor E3 1 RS(0.494)S(0.494)FS(0.012)MEEES(0.001);RS(0.482)S(0.482)FS(0.036)MEEES 95.618 0.00044488 19554900.0 1861.2199999999998 1620.4499999999998 2108.96 1567.92 1933.1799999999998 2149.8 2117.4 1738.85 1770.74 2224.8999999999996 1975.65 True False 2050.1696842422525 1757.0110084697692 2252.0867078067145 1664.7668573953194 1797.4001059089474 2132.2927415639183 2197.978815685738 1704.1672726485635 1696.3219557142218 2084.4194342961896 1732.6575746772107 1.1832515057824933 1.0140555376598839 1.299787529123446 0.9608170025779392 1.0373660278741448 1.2306486709938393 1.268559262839465 0.9835568767625912 0.9790289671230865 1.2030186834144139 1.0 10.758770847337896 -8.30871162873948 24.43835561627289 0.9893297619592479 1.1356204716792078 0.08548232962184477 0.11940271559978044 268.7369999416663 138928.43988033873 0.0159663845570764 0.019302450862792135 4.912339469144045e-09 8.30871162873948 0.14629070971995983 RS(ph)SFSMEEGDVL ddPTM_A549_MK2206_60min_R1 1 RSSFSMEEGDVL 12 1 B1AKB5;B0QYS6;B0QYS7;P19484-2;P19484 B1AKB5 TFEB Transcription factor EB 1 RS(0.496)S(0.496)FS(0.008)MEEGDVL 62.924 0.0058747 750670.0 620.83 789.64 383.69 638.92 948.05 675.68 439.49 798.97 1093.1 870.13 1164.1 True False 725.6109261637843 829.8293031748622 438.1030115032907 795.4554286822091 808.593100874241 747.1800091199154 519.3396441492953 912.226444243005 845.5145953220097 673.5670286684696 875.0218424744381 0.82924892950313 0.9483526729209664 0.5006766576985064 0.9090692255552999 0.924083333265892 0.8538986946965758 0.5935162060419842 1.0425184834967747 0.9662782736154493 0.7697716742289737 1.0 9.773175220018256 -8.300908697985253 24.995410402895036 0.9880141191476564 0.8004851845443149 0.174095758063061 0.14664431811061954 454.7681715224088 287997.68168178014 0.020555851068425765 0.024850991957587172 5.001396686171174e-09 8.300908697985253 -0.1875289346033414 RS(ph)SGENVENNSQR ddPTM_A549_MK2206_60min_R1 2 RSSGENVENNSQR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 RS(0.5)S(0.5)GENVENNSQR;RS(0.5)S(0.5)GENVENNSQR 83.404 0.00019092 11646900.0 558.5 627.3199999999999 624.47 479.53000000000003 466.14 556.87 571.29 629.49 614.15 969.8399999999999 1235.1599999999999 True False 652.7611459859756 659.2479084996388 713.0292360850161 597.0148715269197 397.571423491924 615.7976137796107 675.0859981024614 718.7221352322732 475.0460055960227 750.7524704168671 928.4356833182087 0.7030763225870656 0.7100630882082227 0.7679899091519892 0.643033095618645 0.42821644044422386 0.6632636216423345 0.7271219861883366 0.7741216199958797 0.5116628045770696 0.8086208704664327 1.0 9.858658161785987 -10.945096731772843 1.1525594972958784 1.0039148702220875 0.6482752957895203 0.3741256563658628 0.11353934474720613 0.2830647972471795 0.6560165015838649 0.08164264630131521 0.01822031375339817 1.1347580393033694e-11 10.945096731772843 -0.3556395744325672 RS(ph)SGENVENNSQR ddPTM_A549_PD325901_60min_R1 3 RSSGENVENNSQR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 RS(0.64)S(0.36)GENVENNSQR;RS(0.5)S(0.5)GENVENNSQR;RS(0.5)S(0.5)GENVENNSQR 78.661 0.00034367 27312500.0 1420.8999999999999 1366.92 1703.53 1522.5 1612.54 1584.31 1572.07 1790.51 1484.4699999999998 1751.94 2261.15 True False 1565.1487219887056 1482.1151456061582 1819.1417899580717 1616.5413671516226 1499.2807533609982 1571.4079046363054 1631.8959841197127 1754.7968734220774 1422.082888283482 1641.322209412048 1983.0428846108257 0.789266200007504 0.7473943993384817 0.9173486887627649 0.8151822533423781 0.7560505952725444 0.7924225526492816 0.8229252109391341 0.8849011219273043 0.7171216010099384 0.8276786256864835 1.0 10.95350016179838 -10.95889057038267 1.1781166326932897 1.0018541413556854 0.7992910222378787 0.10861351235871686 0.07401327326926642 0.2595834314015268 0.6307761429709275 0.043281199972921 0.00967177500303412 1.0992827919295748e-11 10.95889057038267 -0.20256311911780667 RS(ph)SGFISELPSEEGK ddPTM_A549_MK2206_60min_R1 3 RSSGFISELPSEEGK 15 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.5)S(0.5)GFISELPSEEGK;RS(0.5)S(0.5)GFIS(0.001)ELPSEEGK;RS(0.824)S(0.176)GFISELPSEEGK 151.44 3.1222000000000004e-14 209870500.0 7497.200000000001 7726.9 6701.6 5994.700000000001 9054.1 7024.4 6384.799999999999 6576.0 9352.1 9628.599999999999 10543.2 True False 8762.544071058297 8120.166205741662 7651.987651203968 7463.401769112308 7722.253883893749 7767.717345580656 7544.835513810144 7508.168138155382 7233.864282234895 7453.492572646879 7925.032462483034 1.1056792653582215 1.0246224534956025 0.9655465371818154 0.9417503088402379 0.9744129024645344 0.9801495933742727 0.9520258181310001 0.947399038893395 0.9127867067396737 0.9404999421682604 1.0 12.952201129487301 -5.4161691598846256 1.9148011141045325 0.9580999897532612 1.1265879372817191 0.8066655112249913 0.022064989243664353 0.25581209221501744 1.231601301232454 0.004446753474688395 0.06790053368130393 3.8355781869375575e-06 5.4161691598846256 0.16848794752845797 RS(ph)SGFISELPSEEGK ddPTM_A549_PD325901_60min_R1 6 RSSGFISELPSEEGK 15 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.498)S(0.498)GFIS(0.004)ELPSEEGK;RS(0.5)S(0.5)GFISELPSEEGK;RS(0.5)S(0.5)GFISELPSEEGK;RS(0.5)S(0.5)GFISELPSEEGK;RS(0.499)S(0.499)GFIS(0.001)ELPSEEGK;RS(0.5)S(0.5)GFISELPSEEGK 139.7 9.560299999999999e-11 316844100.0 26949.499999999996 28275.899999999998 27154.7 25614.1 32449.7 29331.4 29861.7 30415.3 29408.200000000004 31097.1 33447.2 True False 29685.393400826662 30658.809327279665 28997.58123647629 27196.22478315823 30170.54501738773 29092.53480319468 30998.10333444923 29808.64298115875 28172.275623770292 29133.62379893572 29333.406439269922 1.0119995256018244 1.045184076754051 0.9885514420737699 0.9271417160316385 1.028538744037484 0.9917884874171049 1.0567508890801958 1.016201205368791 0.9604160935790542 0.993189245144514 1.0 14.840256998127344 -8.74340867996464 24.761017168544374 0.9813075969693266 1.0078807886924879 0.08819445979550489 0.03353585129842581 373.7902459402807 513314.23558230954 0.005984017896160063 0.006778434287587377 1.8054743381950796e-09 8.74340867996464 0.026573191723161305 RS(ph)SGFISELPSEEGKK ddPTM_A549_MK2206_60min_R1 2 RSSGFISELPSEEGKK 16 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.5)S(0.5)GFISELPSEEGKK;RS(0.5)S(0.5)GFISELPSEEGKK 100.53 2.6588e-07 15763500.0 2513.3999999999996 2851.3 2552.2 1845.1100000000001 3817.8 2727.3 2249.1 2282.08 4277.3 3279.3 3720.4 True False 2937.600473269742 2996.4189911130215 2914.1403371437827 2297.1620328301356 3256.2066774090804 3015.90107576478 2657.7323571780466 2605.57182857689 3308.4983794445434 2538.5038524272377 2796.5220021835744 1.0504478316194226 1.0714805707851982 1.042058791194337 0.821435351138475 1.1643772782286625 1.0784471115942984 0.9503706229033212 0.9317186943433353 1.1830761127075735 0.9077360558740923 1.0 11.449417965715515 -8.754999664637541 24.995370996035845 1.086452608403576 1.0153059628557746 0.0 0.10823137980777021 292.9958663374999 1137244.8224015194 0.017811373249147538 0.019966701314444966 1.7579249714288832e-09 8.754999664637541 -0.07114664554780137 RS(ph)SGFISELPSEEGKK ddPTM_A549_PD325901_60min_R1 2 RSSGFISELPSEEGKK 16 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.5)S(0.5)GFISELPSEEGKK;RS(0.5)S(0.5)GFISELPSEEGKK 97.69 7.6123e-07 13472000.0 3394.8 3246.8 3349.3999999999996 3440.0 4016.2 3907.3 3142.1 3649.1000000000004 3994.7 3766.7 4298.7 True False 3739.437596880327 3520.41923064559 3576.7104255783956 3652.4809871931566 3734.115967137834 3875.4802442611863 3261.6743349230946 3576.315837836429 3826.8166509434477 3528.8699191709557 3769.9871517044667 0.9918966421913857 0.9338013868439727 0.9487327891717913 0.9688311498732339 0.9904850645046854 1.027982348032413 0.8651685546059338 0.9486281236315419 1.015074189102551 0.9360429564263903 1.0 11.880343891391083 -8.762973326728297 24.998877461251688 1.0071183692292192 0.958719313855039 0.0 0.044465827574720146 42.37335900896384 690556.9738291098 0.006659377936526707 0.0072757780599816265 1.72594389185572e-09 8.762973326728297 -0.04839905537418021 RS(ph)SGREEDDEELLR ddPTM_A549_MK2206_60min_R1 4 RSSGREEDDEELLR 14 2 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 RS(0.5)S(0.5)GREEDDEELLR;RS(0.5)S(0.5)GREEDDEELLR;RS(0.5)S(0.5)GREEDDEELLR;RS(0.5)S(0.5)GREEDDEELLR 128.9 2.2947e-09 154426000.0 1659.48 1168.4 858.0899999999999 836.97 1352.15 821.29 897.8100000000001 1078.9299999999998 1640.3500000000001 1338.27 1714.55 True False 1939.5596536093226 1227.8665693600997 979.7800650026278 1042.0276875730108 1153.2505261822735 908.1983626718201 1060.930455559123 1231.871631584548 1268.8133441006842 1035.9538775311187 1288.7799158272899 1.5049580070188213 0.9527356488729196 0.7602384650552924 0.808538117933127 0.8948389961849943 0.7046962413973001 0.8232052986937599 0.9558432874815468 0.9845073844793827 0.8038252806462476 1.0 10.33179020122909 -5.263792876347839 5.762383655934439 0.9270211221436777 1.522287710862402 0.7236240285747308 0.10778677580986516 0.0631240734868158 9.054289616495625 0.01674258968085365 0.14717259281745976 5.4476239889125555e-06 5.263792876347839 0.5952665887187243 RS(ph)SGREEDDEELLR ddPTM_A549_PD325901_60min_R1 6 RSSGREEDDEELLR 14 2 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 RS(0.5)S(0.5)GREEDDEELLR;RS(0.5)S(0.5)GREEDDEELLR;RS(0.5)S(0.5)GREEDDEELLR;RS(0.5)S(0.5)GREEDDEELLR;RS(0.5)S(0.5)GREEDDEELLR;RS(0.5)S(0.5)GREEDDEELLR 128.64 2.3449999999999997e-09 88361100.0 1116.33 1317.27 1317.41 1065.75 1408.3100000000002 1516.7000000000003 1139.62 1653.511 1734.38 2012.17 2631.73 True False 1229.6589998012885 1428.280965859467 1406.8173648298903 1131.578957006136 1309.3951640057473 1504.3484980602823 1182.9888627239916 1620.530425950714 1661.490040068917 1885.12124280092 2308.0438939109963 0.5327710634296572 0.6188274710145287 0.6095279940478205 0.4902761858175356 0.5673181378656401 0.6517850470820784 0.5125504180596014 0.702122879996322 0.7198693423691829 0.8167614349857832 1.0 11.172454945788273 -9.833343291587402 0.4309096220193415 1.0345611924379223 0.5541914707617019 0.7410588851498949 0.07278287398753377 0.24969675851749154 0.09404494614550554 0.04969984905636293 0.0177271048829374 1.4677656117708878e-10 9.833343291587402 -0.4803697216762204 down RS(ph)SGREEDDEELLRR ddPTM_A549_MK2206_60min_R1 2 RSSGREEDDEELLRR 15 3 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 RS(0.5)S(0.5)GREEDDEELLRR;RS(0.5)S(0.5)GREEDDEELLRR 115.34 3.0361e-07 16286600.0 1039.16 797.69 738.38 668.28 1081.01 548.24 748.74 725.4300000000001 1142.95 913.79 1183.42 True False 1214.5448029772365 838.2890137905329 843.0933869368494 832.0086300002287 921.9948610052882 606.2543929077415 884.7763661524571 828.2619240362011 884.073649916102 707.3642043452826 889.5441532695638 1.3653564002563747 0.9423804436343715 0.9477813820011268 0.9353202164750783 1.0364801540389537 0.6815337841066386 0.9946401905969675 0.9311082771910569 0.9938502171776918 0.7951985314560612 1.0 9.796922406421874 -5.259364918316222 24.79090846426343 0.9659984542307966 1.3653565548719144 0.5688887353280014 0.1048205234308419 81.50229527488487 973915.0032112389 0.012114794433330425 0.11034564589369049 5.503450716115023e-06 5.259364918316222 0.3993581006411179 RS(ph)SGREEDDEELLRR ddPTM_A549_PD325901_60min_R1 2 RSSGREEDDEELLRR 15 3 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 RS(0.5)S(0.5)GREEDDEELLRR;RS(0.5)S(0.5)GREEDDEELLRR 76.71300000000001 0.00017713 12258100.0 890.99 704.37 668.15 669.2 546.79 702.5 946.85 997.2 1212.6 1419.8899999999999 1404.68 True False 981.4426488878288 763.7297318867302 713.494676912344 710.5349641365292 508.38535672309524 696.7790729131326 982.8828948862009 977.3100637117343 1161.6386389300899 1330.2379030800569 1231.91326500017 0.796681614502863 0.6199541425399172 0.5791760647306979 0.5767735313219727 0.4126795052596703 0.5656072490728773 0.7978507276533509 0.7933270072480301 0.9429548913331407 1.0798145785692739 1.0 10.266684968812518 -8.301910406488402 1.2968185892822335 0.9774448630278587 0.5866248321410039 0.7604990940492029 0.0976640622308863 0.1423377306670789 0.46513107679120425 0.01778491767233847 0.022836359803497602 4.989874162921652e-09 8.301910406488402 -0.3908200308868548 RS(ph)SGTSGLLPVEQSSR ddPTM_A549_PD325901_60min_R1 1 RSSGTSGLLPVEQSSR 16 1 Q13370-2;Q13370 Q13370-2 PDE3B cGMP-inhibited 3,5-cyclic phosphodiesterase B 1 RS(0.46)S(0.46)GT(0.042)S(0.038)GLLPVEQSSR 57.39 0.0036696999999999997 6724500.0 918.06 953.8 568.68 953.0 938.1 952.63 864.18 1124.5 1031.0 921.11 1290.2 True False 1011.2607753599488 1034.1800733613914 607.2740445506425 1011.8646455799645 872.2110922693096 944.8720971234702 897.0668427974405 1102.0709653468152 987.6706553990787 862.9509574023841 1131.5135792516573 0.8937239410142656 0.913979374463505 0.5366917867236485 0.8942576245962295 0.7708357268201401 0.8350514871844268 0.792802542759344 0.9739794427175019 0.872875653911541 0.7626518790637131 1.0 10.14403818309939 -9.414135380217134 0.36776146830079026 1.0094528663931317 0.7902159268750945 0.0 0.12391152058739606 1.1334964004420798 0.37432047164106114 0.09526381263406174 0.048830766613978185 3.853582133560197e-10 9.414135380217134 -0.21923693951803724 RS(ph)SIGLR ddPTM_A549_PD325901_60min_R1 2 RSSIGLR 7 1 Q96GN5-5;Q96GN5-4;Q96GN5-2;Q96GN5;C9J8L0;C9IZR6 Q96GN5-5 CDCA7L Cell division cycle-associated 7-like protein 1 RS(0.5)S(0.5)IGLR;RS(0.5)S(0.5)IGLR 70.056 0.0090143 23921000.0 1137.17 1258.42 1429.38 1296.1 1641.92 1405.2 1335.37 1551.6399999999999 1521.81 1221.3899999999999 1592.6999999999998 True False 1252.6146612596913 1364.471469825375 1526.3863223601975 1376.1571533433284 1526.5972035164964 1393.7565170925745 1386.1882360925028 1520.691322961967 1457.8536179368284 1144.2712269562778 1396.80799695715 0.8967693942105329 0.9768496978810131 1.0927674567194094 0.9852156891578456 1.092918430336942 0.9978153906111485 0.9923971219467661 1.0886903040895302 1.0437036594239595 0.8192043784464249 1.0 10.447918008433799 -5.4219871141052876 3.6962003146993476 1.0284141052799864 0.899547211936041 0.14026115152257734 0.07457665027520567 0.14745682499066906 3.3445852864467893 0.005206058974389326 0.038344886009297544 3.7845381360406137e-06 5.4219871141052876 -0.1288668933439454 RS(ph)SITEPEGPGGPNIQK ddPTM_A549_MK2206_60min_R1 2 RSSITEPEGPGGPNIQK 17 1 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 RS(0.495)S(0.495)IT(0.011)EPEGPGGPNIQK;RS(0.482)S(0.482)IT(0.037)EPEGPGGPNIQK 122.64 2.5005e-10 28273000.0 11901.7 13058.4 10821.3 9813.0 16394.0 12547.8 10878.7 11521.5 15468.0 14900.0 19258.1 True False 13910.415991372054 13723.016783063955 12355.923058668614 12217.18544052231 13982.464317000482 13875.599867444464 12855.21897382635 13154.70790811393 11964.522697320326 11534.07965150057 14475.78227347906 0.9609439910447667 0.94799828595141 0.8535582274752626 0.8439741085982825 0.9659211538859367 0.9585388620320585 0.8880500363271054 0.9087390000480003 0.8265199400822995 0.7967845490901064 1.0 13.821353693330382 -11.109866599854426 1.473067239973479 0.9996812083875546 0.8960422378786259 0.0 0.07660063038352316 0.38211864385597755 1.490472253967356 0.038264951762644335 0.00842094925536121 7.764855893425031e-12 11.109866599854426 -0.10363897050892867 RS(ph)SITEPEGPGGPNIQK ddPTM_A549_PD325901_60min_R1 2 RSSITEPEGPGGPNIQK 17 1 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 RS(0.497)S(0.497)IT(0.006)EPEGPGGPNIQK;RS(0.497)S(0.497)IT(0.006)EPEGPGGPNIQK 181.87 1.6055e-39 61525000.0 10205.900000000001 11032.3 9383.2 9496.7 11859.3 10499.099999999999 9900.5 10253.6 11052.400000000001 11426.2 11414.599999999999 True False 11241.995454813517 11962.03063886021 10020.000377765331 10083.289590429435 11026.343680363952 10413.598810565507 10277.268945261472 10049.08390420641 10587.906063756322 10704.747781992512 10010.676563111128 1.123000566838783 1.19492729222116 1.0009313870641432 1.0072535584244007 1.1014583890359129 1.0402492523771198 1.0266308056672937 1.0038366378988621 1.0576613875202259 1.0693330979685232 1.0 13.289251860342832 -5.763474974444514 24.999999990330636 1.029306892197916 1.1589639481147547 0.6582594235774542 0.0345420708598173 20.233402058465945 248511.5564106444 0.004677475120943868 0.015681015406283687 1.7239514282299969e-06 5.763474974444514 0.12965705591683863 RS(ph)SLDEK ddPTM_A549_MK2206_60min_R1 1 RSSLDEK 7 1 Q9NWB6;Q9NWB6-2;Q9NWB6-3 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 RS(0.659)S(0.341)LDEK 79.148 0.0068812 8730400.0 3984.3 3563.9 2819.5 1991.2 1357.9 1597.0 1251.6 1458.1 1242.9 5420.7 5954.8 True False 4656.752433217409 3745.2872873523306 3219.34749650376 2479.044089388365 1158.1547087992533 1765.993479997196 1478.999519027187 1664.7901402439718 961.3851345034539 4196.160105160348 4476.058815880753 1.0403689104118934 0.8367377287501909 0.7192370853309017 0.5538452892068542 0.2587443008322855 0.39454206314974477 0.3304245050980557 0.37193214136003067 0.21478384758764218 0.9374675976715625 1.0 12.128013278264596 -5.740147112841854 1.6805547521308313 0.5359474051074627 1.0292668586656961 0.32697674667995713 0.2438212488944672 0.5785298784201086 2.7486196445362476 0.04565315150451464 0.3424634557238957 1.819084557827107e-06 5.740147112841854 0.49331945355823337 RS(ph)SLDEK ddPTM_A549_PD325901_60min_R1 2 RSSLDEK 7 1 Q9NWB6;Q9NWB6-2;Q9NWB6-3 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 RS(0.692)S(0.308)LDEK;RS(0.648)S(0.352)LDEK 89.04700000000001 0.0053143999999999995 45651000.0 6403.0 6641.0 5481.2 4830.5 6547.4 4677.799999999999 4558.6 4438.0 5274.1 6162.5 6951.4 True False 7053.027846360533 7200.660376591529 5853.187193133184 5128.869014138531 6087.533211303785 4639.705547719649 4732.080017561634 4349.480608456352 5052.447918176797 5773.398698301167 6096.421868555248 1.1569126937785204 1.1811289526618616 0.9601020597546498 0.8412916830104459 0.9985419878343214 0.7610538850093036 0.77620612870793 0.7134481015643865 0.8287562814897758 0.9470143016315516 1.0 12.57374702453626 -5.860598303809333 3.5631018352342534 0.8831298981146387 1.172579276744307 0.6203548244286993 0.09142200280301994 0.1374094574122682 3.3332369896646763 0.015140942985935369 0.05535384719879941 1.378483893844835e-06 5.860598303809333 0.28944937862966835 RS(ph)SLLSLMTGK ddPTM_A549_MK2206_60min_R1 5 RSSLLSLMTGK 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 RS(0.497)S(0.497)LLS(0.005)LMTGK;RS(0.499)S(0.499)LLS(0.003)LMTGK;RS(0.5)S(0.5)LLSLMTGK;RS(0.499)S(0.499)LLS(0.001)LMTGK;RS(0.652)S(0.348)LLSLMTGK 120.92 4.6815e-06 67073500.0 12053.900000000001 14704.07 15928.17 12260.84 21386.64 15438.89 15177.72 14872.92 22259.269999999997 18898.4 17685.42 True False 14088.303630439306 15452.444356839074 18187.02401609729 15264.746350410025 18240.693586710688 17072.623092294252 17935.315260410116 16981.20195640723 17217.580885750016 14629.238314491173 13293.642121238965 1.0597775614803657 1.1623935875444575 1.368099415512343 1.1482742059094453 1.3721366515176399 1.2842697987948457 1.349164893776947 1.277392741698434 1.2951740936550307 1.1004687941101072 1.0 13.69844880021983 -10.697878604435056 0.9004988183090574 0.9959184301201112 1.2629397526201727 0.38620579040935255 0.09786987129869881 0.3869650682448003 0.5445905940325765 0.0686103240961315 0.01692006989687221 2.0050324029542795e-11 10.697878604435056 0.2670213225000615 RS(ph)SLLSLMTGK ddPTM_A549_PD325901_60min_R1 5 RSSLLSLMTGK 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 RS(0.499)S(0.499)LLS(0.001)LMTGK;RS(0.498)S(0.498)LLS(0.004)LMTGK;RS(0.499)S(0.499)LLS(0.002)LMTGK;RS(0.5)S(0.5)LLSLMTGK;RS(0.652)S(0.348)LLS(0.001)LMTGK 120.92 4.6815e-06 94481100.0 16013.400000000001 15909.699999999999 16569.6 15706.0 22064.8 17437.699999999997 17113.899999999998 17748.5 21105.199999999997 16899.3 18089.6 True False 17639.068579557978 17250.466254097 17694.112697099103 16676.123949085977 20515.04456742764 17295.69315265101 17765.178829585417 17394.492244071098 20218.22183931002 15832.275313947412 15864.693879422415 1.1118442444349366 1.0873494556659566 1.1153138429005283 1.051146909977005 1.293125774966074 1.0902002449025945 1.1197933577923025 1.096427852707132 1.274416133899339 0.9979565590284063 1.0 13.95353206324433 RS(ph)SLNGKGESSLTALER ddPTM_A549_MK2206_60min_R1 2 RSSLNGKGESSLTALER 17 2 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RS(0.5)S(0.5)LNGKGESSLTALER;RS(0.5)S(0.5)LNGKGESSLTALER 130.09 9.9489e-13 13473400.0 1350.9 1184.8899999999999 1275.7 1283.0900000000001 2098.25 1561.25 1462.63 1110.65 2157.66 2200.75 2198.2 True False 1578.8988936659882 1245.195839925616 1456.613442557136 1597.4471076000984 1789.6002045349667 1726.4604387261245 1728.3709384106212 1268.088038722973 1668.953455075004 1703.5990465127443 1652.3262727663516 0.9555612106939206 0.7536016708376178 0.8815531572456632 0.9667867260414775 1.0830791920646452 1.0448665419061915 1.0460227903517834 0.7674561977398805 1.0100628928939168 1.031030659374889 1.0 10.690282877972047 -6.257203008399272 3.576225149476935 0.9979734996675398 0.8483503167544089 0.30042144413968275 0.08907546797446399 0.1959279163811053 5.4507203419392924 0.012035160617599544 0.03246735112542628 5.530915094094363e-07 6.257203008399272 -0.14962318291313093 RS(ph)SLNGKGESSLTALER ddPTM_A549_PD325901_60min_R1 1 RSSLNGKGESSLTALER 17 2 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RS(0.5)S(0.5)LNGKGESSLTALER 62.06399999999999 0.00066709 13515000.0 1285.3 1409.5 1216.5 1153.1 1602.7 1728.1 1207.2 1537.2 1821.7 2015.8 1770.2 True False 1415.782709812149 1528.2835116406795 1299.059005408765 1224.324368119892 1490.1318810148414 1714.026926549728 1253.1406566051874 1506.5393400899293 1745.1402841323973 1888.5220439814193 1552.4766222223568 0.9119510655081352 0.9844164412942689 0.8367655826914632 0.7886266051254816 0.9598417520012189 1.1040597339856322 0.8071881010429177 0.9704103227869102 1.1241008458048432 1.216457637396186 1.0 10.600355828626164 -8.547851968384059 8.571859016927867 1.0581356550466525 0.9153549944332855 0.4073257709170256 0.09959328609572701 0.19623145710079515 59.07130890391038 0.015734923790891607 0.01792056033220971 2.832357255526106e-09 8.547851968384059 -0.14278066061336703 RS(ph)SLNSISSSDAK ddPTM_A549_MK2206_60min_R1 1 RSSLNSISSSDAK 13 1 Q14123-2;Q14123;A0A0A0MS69;Q14123-3 Q14123-2 PDE1C Calcium/calmodulin-dependent 3,5-cyclic nucleotide phosphodiesterase 1C 1 RS(0.499)S(0.499)LNS(0.001)ISSSDAK 70.197 0.0023373 6152100.0 2243.5 2064.2 2352.6 2278.3 2953.6 2395.3 2205.3 2137.4 3558.9 2934.1 3247.4 True False 2622.147951691203 2169.25896308894 2686.234055781076 2836.483602276773 2519.129352610262 2648.769056128542 2605.9744641344296 2440.3829955129722 2752.8148323954797 2271.2847721790486 2440.9809563194644 1.0742189302635545 0.8886832801677284 1.1004731719953305 1.1620261087795014 1.0320151601709464 1.0851248344527777 1.0675931155414435 0.9997550325802649 1.1277494096251375 0.9304803326297615 1.0 11.253245324422432 -5.7909727373049105 24.999475327284923 1.0664494337029933 0.9814507734899182 0.11958208584817975 0.07394656763986716 209.61673397493072 177436.81317329142 0.008995526056362075 0.027974001415019475 1.6181816152802696e-06 5.7909727373049105 -0.08499866021307512 RS(ph)SLPNGEGLQLK ddPTM_A549_MK2206_60min_R1 1 RSSLPNGEGLQLK 13 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RS(0.5)S(0.5)LPNGEGLQLK 105.28 4.3756000000000006e-05 21083000.0 1362.4 1087.8 848.55 982.14 1484.5 975.89 843.65 1058.8 1389.5 1458.1 1653.9 True False 1592.339812517984 1143.164373630534 968.8871495507232 1222.7643440899396 1266.1320165052593 1079.1580320566457 996.9302846175187 1208.8881424390077 1074.7804685755493 1128.7141973055698 1243.1909846821352 1.2808489058703405 0.9195404308074384 0.779355031920902 0.9835691853915605 1.0184533447441222 0.8680549049610183 0.801912414826929 0.9724074235851233 0.864533673279777 0.9079169743128122 1.0 10.279832231485651 -5.261178297499091 23.838742138943093 0.922113066982882 1.2808490937442434 0.6612844594449998 0.07563553375670326 5.484040695933061 500176.6471279268 0.011015243290636976 0.0887560188115943 5.480519186636201e-06 5.261178297499091 0.3587360267613614 RS(ph)SLPNGEGLQLK ddPTM_A549_PD325901_60min_R1 1 RSSLPNGEGLQLK 13 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RS(0.5)S(0.5)LPNGEGLQLK 154.39 1.1159e-18 32507000.0 2530.0 2258.7 2491.5 2656.3 2776.8 2736.0 2649.8 2727.3 2867.2 2527.5 3300.3 True False 2786.8437375124386 2449.04857590834 2660.588172606608 2820.373618104995 2581.7671474399526 2713.718923117908 2750.6395890261965 2672.9018619745407 2746.701554956583 2367.9132186541506 2894.384022325411 0.9628451912450193 0.8461380926020733 0.9192243158076286 0.9744296528554789 0.8919919152143829 0.937580812423656 0.9503367790208684 0.9234786543034719 0.9489762014198183 0.8181060980124253 1.0 11.49904063374289 -11.169023173057129 0.18205558202555086 1.0717136877047944 0.8995143515587963 0.0 0.06403127194856839 7.630573941056649 0.3217889028320416 0.31498533545154495 0.05198781017424365 6.776053510231752e-12 11.169023173057129 -0.17219933614599803 RS(ph)SLPSFETLDYGDEEDIETQLSSSGK ddPTM_A549_MK2206_60min_R1 2 RSSLPSFETLDYGDEEDIETQLSSSGK 27 1 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2;K7EPU8 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 RS(0.426)S(0.34)LPS(0.213)FET(0.021)LDYGDEEDIETQLSSSGK;RS(0.479)S(0.479)LPS(0.019)FET(0.023)LDYGDEEDIETQLSSSGK 95.244 1.7657999999999998e-09 9888600.0 1260.0900000000001 1111.41 923.5999999999999 887.26 1593.5900000000001 1065.17 910.3199999999999 1360.5700000000002 1530.66 1270.48 1531.76 True False 1472.7623857573287 1167.9760217840715 1054.5803680691154 1104.6387398306151 1359.1750220159083 1177.8855823973784 1075.71336062706 1553.434964070874 1183.9679539617484 983.4776856133185 1151.3817175746465 1.2791260824078932 1.0144125132057684 0.9159259279281936 0.9594027097785658 1.1804729928133415 1.0230191815782532 0.9342803904277899 1.3491919667989356 1.0283018532339943 0.8541717057006836 1.0 10.169150494113767 -8.981512256616965 24.992038331384876 1.0124859928685088 1.074140668669219 0.0982890627491102 0.14082115445993176 324.6803567652473 438915.1183569829 0.022997140372306556 0.02334885698413114 1.0434886830761323e-09 8.981512256616965 0.06165467580071016 RS(ph)SLPSFETLDYGDEEDIETQLSSSGK ddPTM_A549_PD325901_60min_R1 2 RSSLPSFETLDYGDEEDIETQLSSSGK 27 1 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2;K7EPU8 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 RS(0.526)S(0.384)LPS(0.075)FET(0.015)LDYGDEEDIETQLSSSGK;RS(0.45)S(0.45)LPS(0.098)FET(0.003)LDYGDEEDIETQLSSSGK 166.88 1.7363999999999996e-42 37989000.0 1782.58 1788.45 1660.01 1613.73 1904.0 1968.35 1697.08 1857.37 2278.1 1848.9299999999998 2620.4 True False 1963.5462093339609 1939.1689580658208 1772.6682610510506 1713.4064370532597 1770.2696084434124 1952.3204102043615 1761.6633080778097 1820.3232982714217 2182.359379306149 1732.1882442596311 2298.107412084208 0.8544188139374975 0.843811280477592 0.7713600555525713 0.7455728257276412 0.7703163042487701 0.8495340121782018 0.7665713529378139 0.79209670039771 0.9496333234167308 0.7537455539071903 1.0 11.16623051487402 -8.823754181985855 3.8213995889806496 0.9785738530666117 0.7970765413646032 0.07447408677316814 0.07657181434824878 0.0650228415381318 1.850566632177793 0.006984727831388021 0.007454624790128966 1.5005339227325728e-09 8.823754181985855 -0.18149731170200856 RS(ph)SLSSR ddPTM_A549_MK2206_60min_R1 1 RSSLSSR 7 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 RS(0.856)S(0.143)LS(0.001)SR 62.201 0.022069 62005000.0 1631.3 1696.0 1221.7 1238.2 1891.9 1797.6 2138.5 1903.3 2418.1 2229.1 2307.0 True False 1906.623558544176 1782.3191557982962 1394.955430565222 1541.5590555849105 1613.6040161847752 1987.820838849692 2527.037768807637 2173.098603611791 1870.404210912223 1725.5447618228143 1734.1082300391106 1.0994835994182293 1.0278015667788498 0.8044223574982748 0.8889635772907569 0.930509404334228 1.1463072514250505 1.4572549308243827 1.253150504661857 1.0785971593422623 0.9950617452429119 1.0 10.759978228243728 -7.252730341454805 23.59465076073341 1.0978185907904705 0.9430404860709998 0.29110283790543345 0.14463929127221295 427.288415623737 1157612.0802508343 0.024380192047383276 0.04177593024230433 5.5881706311691855e-08 7.252730341454805 -0.15477810471947073 RS(ph)SLYGIAK ddPTM_A549_MK2206_60min_R1 3 RSSLYGIAK 9 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 RS(0.642)S(0.358)LYGIAK;RS(0.669)S(0.331)LYGIAK;RS(0.5)S(0.5)LYGIAK 108.72 0.00018101 55329000.0 5184.9 5754.200000000001 5701.299999999999 3845.5 7244.7 5538.9 4949.0 5119.3 6643.9 7329.299999999999 7570.1 True False 6059.9843613655985 6047.064201824621 6509.8300698055955 4787.647672631054 6179.014226996059 6125.022721575745 5848.16923910638 5844.976452198727 5139.067258128165 5673.606039580079 5690.235245868688 1.0649795833599958 1.0627089989319867 1.1440353146263964 0.841379567937381 1.0858978513203372 1.0764094025853725 1.0277552660678408 1.027194166786406 0.9031379259511827 0.9970775889624804 1.0 12.474272582366625 -8.623138163096241 7.005750965920747 0.9543653707788433 1.0419724109883046 0.1617401505687961 0.07476189847437943 0.25025613596584867 15.379853004648002 0.012712026979663005 0.014413136885743959 2.3815616971626716e-09 8.623138163096241 0.0876070402094613 RS(ph)SLYGIAK ddPTM_A549_PD325901_60min_R1 2 RSSLYGIAK 9 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 RS(0.654)S(0.346)LYGIAK;RS(0.658)S(0.342)LYGIAK 98.902 0.00034352 118734000.0 6849.900000000001 7138.5 7702.4 7258.1 7563.5 7278.200000000001 8829.2 7972.8 8054.1 8690.8 9311.1 True False 7545.296805370139 7740.086447567926 8225.131182293853 7706.416352658915 7032.265852658488 7218.9287522795175 9165.200037523624 7813.776249459393 7715.614185887216 8142.061404818791 8165.893727925989 0.9240013471601385 0.947855397762296 1.0072542524237467 0.9437321387497686 0.8611752842936612 0.8840341293681045 1.1223756202190307 0.9568794929007692 0.9448585106491293 0.9970814801292729 1.0 12.995395076913884 RS(ph)SMGSTAVATDVKK ddPTM_A549_PD325901_60min_R1 1 RSSMGSTAVATDVKK 15 2 Q6UXY1-2;Q6UXY1 Q6UXY1-2 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 RS(0.429)S(0.429)MGS(0.071)T(0.071)AVAT(0.001)DVKK 43.184 0.034645999999999996 4473500.0 1020.3 1227.3 1212.1 832.58 1305.5 1405.7 1227.4 1378.1 1283.3 1340.2 1276.3 True False 1123.8801048948387 1330.7288782097241 1294.360394949415 884.006575673628 1213.8061837305027 1394.25244525835 1274.1093786590511 1350.6127144014642 1229.3673637959625 1255.5795432800376 1119.3231911322985 1.0040711331621124 1.1888692102086882 1.1563777157516502 0.78976883770216 1.0844108237430745 1.2456209755181926 1.1382855182069194 1.206633370148612 1.0983131355943268 1.1217310185540812 1.0 10.128410941997803 -10.37534068739238 1.0253641777890163 1.0067760488625475 1.1024438245203712 0.0 0.12207210881336683 0.9502199448361287 1.9452927665727766 0.054882700749103536 0.021775599088213422 4.213658283858641e-11 10.37534068739238 0.0956677756578237 RS(ph)SMIETGQGAEGGLSLR ddPTM_A549_PD325901_60min_R1 1 RSSMIETGQGAEGGLSLR 18 1 P49796-1;P49796-4;P49796-6;P49796 P49796-1 RGS3 Regulator of G-protein signaling 3 1 RS(0.487)S(0.487)MIET(0.025)GQGAEGGLSLR 55.763000000000005 0.0010132 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RS(ph)SNPPAR ddPTM_A549_MK2206_60min_R1 4 RSSNPPAR 8 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 RS(0.63)S(0.37)NPPAR;RS(0.5)S(0.5)NPPAR;RS(0.5)S(0.5)NPPAR;RS(0.635)S(0.365)NPPAR 94.465 0.00106 110804400.0 3951.7000000000003 3425.66 2279.0699999999997 1667.77 2542.47 1913.5 1721.7 2031.4300000000003 2468.97 4833.0599999999995 5004.289999999999 True False 4618.650350210886 3600.01146182311 2602.276396118754 2076.37372486904 2168.476030989642 2115.9852999215004 2034.5106039542236 2319.391423493458 1909.752237134921 3741.2683892940513 3761.5866816222015 1.2278463162303286 0.9570459932271422 0.6918028524591943 0.5519941186025239 0.5764790803795798 0.5625246681831009 0.5408650062204153 0.6165992225634981 0.5076985854042134 0.994598478235948 1.0 11.877125620728755 -5.498104630346953 2.4819656986108645 0.6931769269363555 1.2377844485959493 0.5157482796754999 0.16541994022562506 0.27458891429360593 2.8300005194419287 0.028820752503057864 0.251224043358484 3.1761087894577196e-06 5.498104630346953 0.5446075216595938 RS(ph)SNPPAR ddPTM_A549_PD325901_60min_R1 2 RSSNPPAR 8 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 RS(0.695)S(0.305)NPPAR;RS(0.616)S(0.384)NPPAR 101.38 0.00096203 122023000.0 1271.81 1217.4499999999998 1149.56 921.8199999999999 1084.6399999999999 824.63 774.4200000000001 770.52 849.22 1398.62 1773.5 True False 1400.9232149429624 1320.0487841411468 1227.5760544658442 978.758727794883 1008.4586282048658 817.9144866852049 803.8909768788841 755.1513741387532 813.5302366421 1310.3108945100178 1555.37074314278 0.9007005057278235 0.8487036225677347 0.789249804188425 0.6292768024022392 0.648371864168652 0.5258646469281839 0.516848462286582 0.48551213751963435 0.5230458655781849 0.8424428068271398 1.0 10.603042791411463 -3.295235736756452 20.752173638834403 0.7190034777834817 48.81615215275909 0.0 0.17401498067635054 0.0 0.0 0.029096147148765187 0.0 0.000506715586395437 3.295235736756452 48.09714867497561 RS(ph)SPAAFINPPIGTVTPALK ddPTM_A549_MK2206_60min_R1 2 RSSPAAFINPPIGTVTPALK 20 1 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 RS(0.5)S(0.5)PAAFINPPIGTVTPALK;RS(0.5)S(0.5)PAAFINPPIGTVTPALK 129.04 4.366e-17 34859000.0 6543.2 7775.1 7715.900000000001 6739.200000000001 10077.1 8171.9 7479.7 8235.900000000001 11121.099999999999 12167.6 12007.8 True False 7647.532194118956 8170.819379862814 8810.130643118764 8390.304302534189 8594.771939053655 9036.645033931802 8838.664671194983 9403.36404638593 8602.188606747413 9418.930709234794 9025.931861579376 0.8472845032956824 0.905260476720801 0.9760909763368354 0.9295776249152888 0.9522309796774517 1.001186932553527 0.9792523150787863 1.041816423012583 0.9530526862676963 1.043541082924445 1.0 13.13986017208324 -3.611191491415617 0.5718624908686014 0.9832418891306532 3.6532492929097004e-09 0.6589161912614361 0.03242052014342455 8.43488032986827 0.425479572665581 0.00499386058549278 8.391162759302448 0.0002447983625983912 3.611191491415617 -0.983241885477404 RS(ph)SPAAFINPPIGTVTPALK ddPTM_A549_PD325901_60min_R1 2 RSSPAAFINPPIGTVTPALK 20 1 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 RS(0.5)S(0.5)PAAFINPPIGTVTPALK;RS(0.5)S(0.5)PAAFINPPIGTVTPALK 144.44 2.7154e-21 72687000.0 15402.1 15033.7 16798.2 16308.3 19797.3 19896.5 18980.5 18512.0 19348.2 19214.4 19999.8 True False 16965.70985357325 16300.642659774738 17938.226867782585 17315.626652163424 18406.805944977314 19734.469500663563 19702.813314028142 18142.763637616932 18535.062439177924 18001.199504849974 17539.951389177884 0.9672609391632101 0.9293436622539446 1.0227067606840938 0.9872106408942006 1.0494217193973683 1.1251154044155272 1.1233105997194919 1.0343679543382875 1.0567339685225137 1.0262970007976577 1.0 14.09835712900318 -6.085430066997294 1.4886671509491642 1.0429919792629299 0.9480435893692427 0.4484995123350901 0.04232128214015247 0.39933213682319213 1.5906344416104379 0.0072170302797472646 0.0349678422608964 8.21428814148103e-07 6.085430066997294 -0.09494838989368715 RS(ph)SPDDGNDVSPYSLSPVSNK ddPTM_A549_PD325901_60min_R1 2 RSSPDDGNDVSPYSLSPVSNK 21 1 K7EQT1;Q9UM11-2;Q9UM11 K7EQT1 FZR1 Fizzy-related protein homolog 1 RS(0.5)S(0.5)PDDGNDVSPYSLSPVSNK;RS(0.633)S(0.367)PDDGNDVSPYSLSPVSNK 177.8 6.070099999999999e-36 34512000.0 6537.200000000001 6750.0 6169.1 5734.0 7428.1 7356.0 6116.2 6961.799999999999 7390.4 8073.9 8534.9 True False 7200.851731567717 7318.846189127058 6587.772223811929 6088.176157141156 6906.375881553844 7296.095174874026 6348.955337913059 6822.941437573556 7079.807188808285 7564.112576099607 7485.161407188793 0.9620168944723058 0.9777806771271484 0.8801109108328636 0.8133660486324364 0.922675611900756 0.9747411950084086 0.8482055352628047 0.9115289659646835 0.9458456275917839 1.0105476909068372 1.0 12.869817711011263 -9.559173008863327 0.8296924287292115 0.9919570413609473 0.9098691983821692 0.3322561088798086 0.0493383513340339 0.4859887971372953 0.7126434667177647 0.01718157307703105 0.011059510450171544 2.759478350381598e-10 9.559173008863327 -0.08208784297877814 RS(ph)SPESDR ddPTM_A549_MK2206_60min_R1 2 RSSPESDR 8 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 RS(0.85)S(0.15)PESDR;RS(0.467)S(0.467)PES(0.066)DR 68.893 0.0030633 65430000.0 2852.6000000000004 1663.58 1543.69 1027.24 483.39 546.7 364.0 334.12 436.07000000000005 3371.5 3451.9 True False 3334.049140625955 1748.2491162753133 1762.6084542925664 1278.9138461145567 412.2839713428607 604.5514311299106 430.1340883076828 381.4825331995859 337.3008412606979 2609.875808391555 2594.697962406591 1.2849469144121934 0.6737775038192909 0.6793116115363736 0.4928950747424798 0.1588947836381179 0.232994914972372 0.1657742421429013 0.14702386895381053 0.12999618689639322 1.0058495617620504 1.0 11.34135089511462 -4.913489833020872 1.1909150466523557 0.4626426472812106 2.3137210918271958 0.3885019024553725 0.30967354928472635 3.145647982073976 2.1164493090412866 0.05562362201112748 8.777787217319144 1.2204223909063994e-05 4.913489833020872 1.8510784445459851 RS(ph)SPESDR ddPTM_A549_PD325901_60min_R1 3 RSSPESDR 8 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 RS(0.5)S(0.5)PESDR;RS(0.653)S(0.341)PES(0.007)DR;RS(0.495)S(0.495)PES(0.011)DR 77.66199999999999 0.0035567 139985800.0 1569.5700000000002 1439.01 953.48 1036.68 1540.79 940.9399999999999 716.39 808.73 1256.97 1581.28 2395.16 True False 1728.9115909436366 1560.280422906034 1018.1888865410191 1100.7133691288966 1432.5702258369354 933.2772966076632 743.6526134736495 792.5992457135885 1204.1439221309201 1481.4377109370664 2100.5705041702067 0.8230676321081699 0.7427888851188049 0.4847201674590954 0.5240068671552227 0.6819910224355201 0.4442970587061242 0.35402411487607566 0.37732570467883003 0.5732461346764439 0.7052549333602502 1.0 11.036565494342593 -10.405411698529033 0.8748657382112328 0.9866190650968752 0.5516045026653944 0.2785709913997171 0.16215987776225618 0.33555383794927257 0.48334630281878666 0.08594410423194167 0.028978683353295186 3.931771782140133e-11 10.405411698529033 -0.43501456243148084 RS(ph)SPPGHYYQK ddPTM_A549_MK2206_60min_R1 7 RSSPPGHYYQK 11 1 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4 D6RDK6 OCIAD1 OCIA domain-containing protein 1 1 RS(0.5)S(0.5)PPGHYYQK;RS(0.5)S(0.5)PPGHY(0.001)YQK;RS(0.5)S(0.5)PPGHYYQK;RS(0.5)S(0.5)PPGHYYQK;RS(0.5)S(0.5)PPGHYYQK;RS(0.5)S(0.5)PPGHYYQK;RS(0.499)S(0.499)PPGHY(0.001)Y(0.001)QK 102.52 5.0459e-05 156591000.0 16263.1 17488.2 16094.7 14796.4 18659.399999999998 14631.81 13762.800000000001 13368.67 22249.199999999993 21242.2 22836.3 True False 19007.913685379637 18378.27468185835 18377.170474190123 18421.518664235628 15914.626977957716 16180.138422390584 16263.322611431266 15263.719912334815 17209.79172467153 16443.572266651372 17165.416460182976 1.1073377525951982 1.070657081026186 1.0705927535645838 1.07317633143165 0.9271331700499897 0.9426009826165389 0.9474470164563608 0.8892134920082276 1.002585155133957 0.9579477611157294 1.0 14.067217239335278 -6.690237260826226 8.78341393300974 0.979743981312806 1.0795441633499216 0.6985054634903339 0.03784491873309543 0.1790574060733241 20.150154453021596 0.006312424483709824 0.013150064837515215 2.0406228208256346e-07 6.690237260826226 0.0998001820371156 RS(ph)SPPGHYYQK ddPTM_A549_PD325901_60min_R1 3 RSSPPGHYYQK 11 1 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4 D6RDK6 OCIAD1 OCIA domain-containing protein 1 1 RS(0.499)S(0.499)PPGHY(0.002)YQK;RS(0.5)S(0.5)PPGHYYQK;RS(0.753)S(0.247)PPGHYYQK 106.14 3.5808e-05 224163000.0 17603.8 16964.199999999997 15871.4 15947.3 21320.1 19707.4 16911.899999999998 18729.5 18640.300000000003 16863.9 18041.7 True False 19390.92481676738 18393.832669865067 16948.528646481434 16932.32850205392 19822.649726352112 19546.909468367652 17555.491609046767 18355.925429491497 17856.913014389378 15799.11047598883 15822.685275759297 1.225514157604759 1.1624975375099462 1.0711537486274187 1.0701298930589627 1.2527993435299412 1.235372449600192 1.1095140491697808 1.160101784847682 1.1285640018225327 0.9985100632819522 1.0 13.949706840628842 -10.223582190646676 0.5749929495562295 0.9920786165737856 1.1613769296904766 0.525052096872278 0.05836819006923763 0.6219870256263347 0.3690198685221589 0.05126350642495457 0.01448499911710266 5.976099357333082e-11 10.223582190646676 0.16929831311669097 RS(ph)SPPPPPSGSSSR ddPTM_A549_PD325901_60min_R1 2 RSSPPPPPSGSSSR 14 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RS(0.5)S(0.5)PPPPPSGSSSR;RS(0.5)S(0.5)PPPPPSGSSSR 80.459 0.00021495 66261700.0 3218.12 3834.42 3262.13 2986.2799999999997 3775.68 3593.01 2988.3399999999997 3031.14 2987.8 3630.74 3911.51 True False 3544.821173345267 4157.5600302981575 3483.5177585812526 3170.7357332660404 3510.4892621888794 3563.7497178186677 3102.062913982393 2970.6815348166697 2862.2331563543803 3401.494456774035 3430.419067104832 1.0333493092250643 1.2119685522291042 1.015478776918423 0.9242998220453701 1.023341228438199 1.0388671611560167 0.904281037768496 0.8659821079305723 0.8343683673522772 0.9915681991718848 1.0 11.744169114443176 -6.2943730126920645 0.7337145046084425 0.919057053496439 1.1378631394055503 0.3868650979583539 0.07703621931367756 0.8017742433826107 0.6211574151078294 0.01481712619606056 0.10855905329962819 5.077231751169981e-07 6.2943730126920645 0.21880608590911133 RS(ph)SPSARPPDVPGQQPQAAK ddPTM_A549_MK2206_60min_R1 2 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.525)S(0.396)PS(0.08)ARPPDVPGQQPQAAK;RS(0.443)S(0.443)PS(0.113)ARPPDVPGQQPQAAK 103.9 2.9312e-10 210448900.0 5573.04 5773.599999999999 5836.0599999999995 5664.99 8111.969999999999 5662.17 4786.77 5743.8099999999995 8955.1 8915.210000000001 9602.7 True False 6513.632904253687 6067.451578960519 6663.701064176533 7052.912804311062 6918.7099588616775 6261.3370711557445 5656.464148045517 6558.012657180387 6926.784148356173 6901.2578691177505 7218.084568962535 0.9024046257731642 0.8405902592289248 0.9231952051144111 0.97711695352508 0.9585243692782216 0.8674513316287863 0.7836516868156517 0.9085530371006694 0.95964297483311 0.9561065408949174 1.0 12.817400330987857 -8.876498266474286 2.665998576923142 0.983668804330834 0.8942048686368134 0.3113940195485716 0.05125424221374671 0.2235411503083586 3.070399201832501 0.010229840147093402 0.010708198274127062 1.3289288616558454e-09 8.876498266474286 -0.08946393569402067 RS(ph)SPSARPPDVPGQQPQAAK ddPTM_A549_PD325901_60min_R1 3 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.499)S(0.499)PS(0.002)ARPPDVPGQQPQAAK;RS(0.512)S(0.386)PS(0.102)ARPPDVPGQQPQAAK;RS(0.453)S(0.453)PS(0.093)ARPPDVPGQQPQAAK 130.6 2.9618e-17 244408200.0 9049.6 10238.25 10854.87 11209.77 13326.300000000001 12300.6 11480.099999999999 10875.699999999999 11988.1 12230.1 13033.7 True False 9968.308730036582 11101.063258641492 11591.54675383596 11902.172033665194 12390.306661239214 12200.42799185093 11916.981487651768 10658.7756316784 11484.281846740725 11457.889398798074 11430.63752743167 0.8720693579963728 0.9711674639319764 1.0140770124166858 1.0412518116423444 1.083955871359274 1.067344490853803 1.0425474046441374 0.9324742916656287 1.0046930295165355 1.002384107736861 1.0 13.480618249594801 -5.308555782098436 2.3076296947983637 1.0132460372722072 0.8458069160838076 0.5537291905530681 0.038736676463588804 0.33506771021882364 2.247569047444009 0.005813580188578679 0.10793691987731704 4.914102579238739e-06 5.308555782098436 -0.16743912118839954 RS(ph)SPSSSSTQPQEESR ddPTM_A549_MK2206_60min_R1 2 RSSPSSSSTQPQEESR 16 1 Q4G0A6 Q4G0A6 FAM188B Protein FAM188B 1 RS(0.469)S(0.469)PS(0.015)S(0.014)S(0.014)S(0.017)T(0.002)QPQEESR;RS(0.431)S(0.431)PS(0.041)S(0.026)S(0.033)S(0.033)T(0.005)QPQEESR 58.997 0.002486 25722000.0 277.48 0.0 260.99 293.87 202.29 207.38 101.06 0.0 285.6 312.39 360.77 True False 324.3118402653333 0.0 298.00230647721804 365.86816319232577 172.53340897194263 229.32481395229712 119.42129385817147 0.0 220.91205600948302 241.82088203572255 271.180852254534 1.195924555768155 0.0 1.0989061506359936 1.3491666544690883 0.6362300565749401 0.845652678077174 0.440375096048747 0.0 0.8146299938689329 0.8917328787238497 1.0 8.083111504927942 -9.369246875092937 2.4984060940225565 0.9389709965760136 0.6924145026010572 0.045958211161667095 0.41745136404580613 0.5837041772133247 7.381884387278053 0.08557417123279426 0.07578372043289638 4.273199067078577e-10 9.369246875092937 -0.24655649397495638 RS(ph)SPSSSSTQPQEESR ddPTM_A549_PD325901_60min_R1 1 RSSPSSSSTQPQEESR 16 1 Q4G0A6 Q4G0A6 FAM188B Protein FAM188B 1 RS(0.464)S(0.464)PS(0.021)S(0.021)S(0.025)S(0.003)T(0.003)QPQEESR 55.763000000000005 0.0048677 12118000.0 137.59 163.25 178.32 0.0 218.23 0.0 265.09 120.96 217.78 182.31 169.08 True False 151.55803551159548 177.00765042592482 190.42186752527005 0.0 202.9022776526292 0.0 275.1781450128139 118.54735790871567 208.6274639503504 170.79891548678074 148.28423188642876 1.0220778944835762 1.193705144330487 1.2841680137043472 0.0 1.3683334706014632 0.0 1.8557478533764364 0.7994603094381024 1.4069430127280065 1.1518346442769183 1.0 7.212221383732343 -7.7812306851611766 24.999998397382186 1.2065920792316076 0.83868405293499 0.15445502396634392 0.49712081174342465 388.98381112821994 491355.4342747189 0.07218034013158545 0.09980371601952245 1.6548906980146783e-08 7.7812306851611766 -0.36790802629661756 RS(ph)SPTQETQAPFIAK ddPTM_A549_MK2206_60min_R1 2 RSSPTQETQAPFIAK 15 1 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.448)S(0.448)PT(0.104)QETQAPFIAK;RS(0.438)S(0.438)PT(0.121)QET(0.002)QAPFIAK 119.68 2.7271999999999997e-07 28178000.0 5865.8 7588.700000000001 6796.9 5546.8 8646.2 6590.0 5516.5 6146.4 9449.9 10157.5 11389.3 True False 6855.8036349588865 7974.93241604159 7760.802624219335 6905.7662490053135 7374.3554335518875 7287.349425912039 6518.776643267396 7017.671022560559 7309.512738389402 7862.913695309873 8561.022481310982 0.8008159831288086 0.9315397119270686 0.9065275370040722 0.8066520399964897 0.8613872291131544 0.8512241898465497 0.7614483734271367 0.8197234661958178 0.8538130526285067 0.9184549757315665 1.0 13.063567399118256 -10.416758866162874 0.8091307891995028 0.9984292312711048 0.8451135781883322 0.4053310526554592 0.0508651521424688 0.33919582082312205 0.4083440567818096 0.03006141048262683 0.00932615669288553 3.83037358570168e-11 10.416758866162874 -0.15331565308277262 RS(ph)SPTQETQAPFIAK ddPTM_A549_PD325901_60min_R1 2 RSSPTQETQAPFIAK 15 1 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.465)S(0.465)PT(0.071)QETQAPFIAK;RS(0.443)S(0.443)PT(0.113)QET(0.001)QAPFIAK 151.57 1.5425e-14 41774000.0 8626.2 8403.1 8478.5 8126.7 10690.9 9019.5 9108.8 10967.7 9444.1 9503.8 10683.8 True False 9501.92547372719 9111.258727682018 9053.901995362283 8628.667801925189 9940.008065602773 8946.048182405697 9455.440368526612 10748.94061950579 9047.19731974242 8903.72844607134 9369.760330188232 1.0141054988475144 0.9724110763352876 0.9662896036082917 0.9209059247892037 1.060860439895914 0.9547787635061075 1.0091443148297325 1.1471948311072597 0.9655740382807281 0.9502621339613785 1.0 13.193796430212387 -6.7461524709905465 24.999890947724204 1.0001420391752887 0.9685598148819509 0.09846986335578456 0.05680779844663629 580.8537150399736 949910.6742126746 0.007987441511797845 0.01657819323464719 1.7941036469557084e-07 6.7461524709905465 -0.03158222429333779 RS(ph)SPVPPVPER ddPTM_A549_MK2206_60min_R1 2 RSSPVPPVPER 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RS(0.648)S(0.352)PVPPVPER;RS(0.5)S(0.5)PVPPVPER 87.13799999999999 0.00012901 250360000.0 3298.4 3080.3 3162.2 3446.4 4948.7 3847.3999999999996 3381.9 3373.1000000000004 5438.6 5045.7 5506.0 True False 3855.089281862385 3237.074112974937 3610.647509645038 4290.768154714777 4220.752785503249 4254.529314302574 3996.347453977343 3851.2472546855106 4206.7657836595745 3905.872865609158 4138.708242130619 0.9314716226234334 0.7821460039204122 0.8724092877313494 1.036740911339495 1.0198237079235122 1.0279848361846184 0.9656026035601901 0.9305433070833903 1.0164441505772632 0.943742017339788 1.0 12.014964834156306 -6.191903117829873 5.695985333342726 1.003199448601135 0.8513182713135845 0.6025236294508114 0.046584787666527815 0.08719634696350531 5.320746204543633 0.005661932127641933 0.015235673755030984 6.428311037262363e-07 6.191903117829873 -0.15188117728755057 RS(ph)SPVPPVPER ddPTM_A549_PD325901_60min_R1 2 RSSPVPPVPER 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RS(0.604)S(0.396)PVPPVPER;RS(0.633)S(0.367)PVPPVPER 80.102 0.00037828 283310000.0 9679.0 9513.5 9111.9 9176.9 12268.400000000001 9357.5 10736.5 11236.3 10809.900000000001 9986.6 11327.900000000001 True False 10661.604954696793 10315.23603263115 9730.2883283059 9743.736270747935 11406.709907682343 9281.295622469239 11145.08338273823 11012.183181793174 10355.59749543986 9356.044371676182 9934.640113474547 1.0731747534806269 1.0383099855464712 0.9794303786715454 0.9807840203020858 1.148175452496885 0.9342357162873808 1.1218406762034525 1.1084632212149421 1.0423726855887172 0.9417597683268261 1.0 13.278251990847684 -5.293102563469025 4.817801226518255 1.0306492025599516 1.0745799670655993 0.03291038594130469 0.06848277672066921 0.4852799920582026 28.22251277712269 0.008166992639749446 0.06398868938442825 5.092106011129531e-06 5.293102563469025 0.0439307645056477 RS(ph)SPVPPVPERR ddPTM_A549_MK2206_60min_R1 4 RSSPVPPVPERR 12 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RS(0.5)S(0.5)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR 84.266 0.00010173 107652000.0 2639.67 3352.53 2932.27 3031.6000000000004 4112.13 2476.86 2108.54 2194.91 4401.15 4866.62 4988.79 True False 3085.181762264641 3523.1594571865926 3348.1099782135407 3774.342136093695 3507.241124305674 2738.959681193397 2491.6344246161575 2506.0452141299616 3404.296552192352 3767.2471619856187 3749.9357594004377 0.8227292306356518 0.939525283427761 0.8928446226899782 1.00650847861382 0.9352803219398171 0.7304017607041136 0.6644472290945419 0.6682901721310135 0.9078279657613791 1.0046164531063724 1.0 11.872650165500403 -9.310404545966836 2.1689644469697416 0.9698795267788005 0.8381719789525598 0.24929787311925522 0.10751001870007872 0.3454383521417797 3.3291155309473677 0.02502479162838852 0.02241181383325054 4.89322802080702e-10 9.310404545966836 -0.13170754782624072 RS(ph)SPVPPVPERR ddPTM_A549_PD325901_60min_R1 2 RSSPVPPVPERR 12 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RS(0.5)S(0.5)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR 73.252 0.00030196 76252000.0 1182.55 1254.6599999999999 1154.0700000000002 1451.8899999999999 1101.79 1281.5 1761.17 1549.48 1381.4699999999998 1416.97 1790.91 True False 1302.601605452702 1360.3946014296532 1232.3921301866783 1541.5699478185675 1024.4040713691531 1271.0638888799713 1828.1922880992038 1518.5744058564549 1323.4116200913327 1327.5022723783877 1570.6394235138632 0.8293447789171736 0.8661406183133704 0.7846435736533011 0.9814919482727226 0.6522210356068471 0.8092652392719928 1.1639796255776762 0.966851069139136 0.8425941691509131 0.8451986194313621 1.0 10.6171362994024 RS(ph)SPVYVGR ddPTM_A549_MK2206_60min_R1 2 RSSPVYVGR 9 1 P21980-2;P21980;A2A299;P21980-3 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 1 RS(0.915)S(0.085)PVYVGR;RS(0.5)S(0.5)PVYVGR 142.89 1.5364e-05 62844000.0 1723.0300000000002 1917.58 2094.8999999999996 1602.6999999999998 1989.24 1873.5 1736.04 1625.94 2903.5 2476.0 2574.6 True False 2013.8353399609955 2015.1766313535948 2391.9883207752164 1995.3615719479367 1696.6254311302937 2071.75252647135 2051.4559963342567 1856.4219742324149 2245.8618859367434 1916.669880343316 1935.2557646548307 1.0406042326504477 1.041297314886448 1.2360063018346559 1.0310583274783973 0.8766931286898407 1.0705316394398465 1.0600438628328548 0.9592644073914042 1.1604987448970663 0.9903961612459893 1.0 10.918308531142925 -14.999402950640704 0.003449760959013227 0.5399171860681355 1.5561381065039794 0.0 0.0924706802917218 1050161.6469209527 282.27024783353806 43735.87092063556 39515.47312911551 1.0013757023660263e-15 14.999402950640704 1.0162209204358439 RS(ph)SPVYVGR ddPTM_A549_PD325901_60min_R1 1 RSSPVYVGR 9 1 P21980-2;P21980;A2A299;P21980-3 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 1 RS(0.5)S(0.5)PVYVGR 111.94 0.00012535 40375000.0 2202.9 1633.6 2460.9 1781.7 2642.9 2249.7 1786.1 2566.8 2511.2 2230.5 2495.7 True False 2426.536786310733 1771.2692051196973 2627.9114725938584 1891.7515624657126 2457.2718215100303 2231.3791890856587 1854.071012891423 2515.603160384353 2405.662996933233 2089.6658493404893 2188.7447215457782 1.1086431242639465 0.8092625821931198 1.2006477716313684 0.8643089090488738 1.1226854357755378 1.0194789584734076 0.8470933109010559 1.1493360260888417 1.0991062471800084 0.9547325591559551 1.0 11.095887984070703 RS(ph)SQPPADRDPAPFR ddPTM_A549_PD325901_60min_R1 2 RSSQPPADRDPAPFR 15 2 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 1 RS(0.555)S(0.445)QPPADRDPAPFR;RS(0.5)S(0.5)QPPADRDPAPFR 80.859 7.6164e-05 28439000.0 2816.6000000000004 2807.8 2903.5 2808.7 3205.2 3102.2 3020.3 3330.5 3559.7 3531.1000000000004 3284.2 True False 3102.53915852867 3044.4231599749587 3100.5489701638703 2982.1870199794835 2980.07780933972 3076.936711731132 3135.239169271577 3264.0705647732957 3410.098188190202 3308.1457433787054 2880.2642202591037 1.0771717180341083 1.0569944029999747 1.0764807437995916 1.035386614534694 1.0346543169125078 1.068282795060495 1.088524846859201 1.1332538667163201 1.18395325130395 1.1485563442791058 1.0 11.491985447639685 -7.681103151363035 3.71706317586199 1.0934796552337815 1.055889477082663 0.20930788846419213 0.04604821091651186 0.5648249993639697 15.34320151942153 0.010611490849495545 0.015866749205592157 2.0839958444729927e-08 7.681103151363035 -0.037590178151118536 RS(ph)SSAEESGQDVLENTFSQK ddPTM_A549_MK2206_60min_R1 1 RSSSAEESGQDVLENTFSQK 20 1 Q14789;Q14789-2;E7EU81;Q14789-4;Q14789-3;H0Y867 Q14789 GOLGB1 Golgin subfamily B member 1 1 RS(0.409)S(0.409)S(0.109)AEES(0.074)GQDVLENTFSQK 73.574 5.542999999999999e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RS(ph)SSAEESGQDVLENTFSQK ddPTM_A549_PD325901_60min_R1 2 RSSSAEESGQDVLENTFSQK 20 1 Q14789;Q14789-2;E7EU81;Q14789-4;Q14789-3;H0Y867 Q14789 GOLGB1 Golgin subfamily B member 1 1 RS(0.427)S(0.427)S(0.141)AEES(0.005)GQDVLENTFSQK;RS(0.545)S(0.35)S(0.105)AEESGQDVLENTFSQK 116.55 1.4826e-14 10748900.0 4889.1 4810.6 4461.2 5177.6 8003.9 5750.0 5071.9 6048.0 5855.9 6394.0 7095.3 True False 5385.437832834806 5216.006144802169 4763.963859374914 5497.408592817239 7441.733675956008 5703.173906406421 5264.913929950171 5927.367895435782 5609.796887440795 5990.281748793135 6222.623080812504 0.8654610383587006 0.8382326997895398 0.7655877268325356 0.8834551798209556 1.1959158668797791 0.9165224749016525 0.8460923731962113 0.9525513305976795 0.9015164207420241 0.9626618342454656 1.0 12.603307146039022 -6.527081191445974 24.999732175554474 0.9584273828184205 0.8245933042297722 0.3563828618083661 0.08588227534185558 106.06125704281891 630942.9346474716 0.012509400288985109 0.02612619144828023 2.971110530067096e-07 6.527081191445974 -0.13383407858864838 RS(ph)SSDEQGLSYSSLK ddPTM_A549_PD325901_60min_R1 2 RSSSDEQGLSYSSLK 15 1 Q9NPH3 Q9NPH3 IL1RAP Interleukin-1 receptor accessory protein 1 RS(0.333)S(0.333)S(0.333)DEQGLSYSSLK;RS(0.332)S(0.332)S(0.332)DEQGLS(0.001)Y(0.001)SSLK 111.4 9.5021e-07 26417000.0 7289.6 8624.9 6955.3 8039.4 9090.1 7700.8 8128.299999999999 9220.599999999999 9504.900000000001 8967.5 9934.5 True False 8029.634825680108 9351.750592089178 7427.328483616587 8535.975479197872 8451.642735142577 7638.0872379921 8437.626904476423 9036.68789957923 9105.442107180112 8401.290519596872 8712.619479984181 0.921609723014632 1.0733569408802135 0.8524793835745563 0.9797255003283318 0.970046121554929 0.8766694397177974 0.96843743995253 1.0371952913058515 1.0450866272879673 0.9642668934294059 1.0 13.088890820090636 -8.137692049464574 4.953369903975835 1.0229428937364495 0.9479922797874246 0.21040018293845208 0.05789622153765519 0.21432105466544268 7.843043244511255 0.008451369106579615 0.010986680310998913 7.2829604332970285e-09 8.137692049464574 -0.07495061394902491 RS(ph)SSEGLSK ddPTM_A549_MK2206_60min_R1 1 RSSSEGLSK 9 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 RS(0.499)S(0.499)S(0.001)EGLSK 103.44 0.00052316 15103000.0 5605.0 5673.5 5375.7 5045.5 6600.1 4942.4 4218.3 5610.6 6857.1 8380.2 8488.6 True False 6550.986970906706 5962.256916522193 6138.05509379509 6281.647726501103 5629.234033099605 5465.4014875004 4984.7105074403835 6405.9197317418775 5303.977798538605 6487.106999698334 6380.6463465583 1.0266964528507816 0.9344283623771462 0.9619801443949229 0.9844845467558946 0.8822357058130945 0.8565592246698361 0.7812234430026231 1.003960944363765 0.8312602690164067 1.0166849324281166 1.0 12.639486858141815 -6.754281311166355 24.993609046006217 0.9072378150495338 0.9727983687710337 0.15820454822688979 0.07349419218761416 270.9251887336378 945973.0354013806 0.011275425804493871 0.023089523828948452 1.760835108497979e-07 6.754281311166355 0.06556055372149983 RS(ph)SSFVLPK ddPTM_A549_PD325901_60min_R1 2 RSSSFVLPK 9 1 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 RS(0.437)S(0.437)S(0.127)FVLPK;RS(0.333)S(0.333)S(0.333)FVLPK 64.64 0.0025858 6581200.0 1818.63 1379.24 1486.49 1493.09 2029.8 1880.54 1824.6999999999998 1655.1399999999999 2042.66 2106.6 1857.34 True False 2003.2559787953558 1495.4733952432018 1587.3721503905265 1585.314778246579 1887.233850429852 1865.22550573105 1894.1399570141537 1622.1269342677886 1956.814103741494 1973.5889164853957 1628.8989546483297 1.2298221280569535 0.918088498353826 0.9745062122243374 0.9732431675535329 1.1585947949959212 1.1450836163951876 1.1628345340936683 0.9958425779811473 1.2013109211945927 1.2116091737019272 1.0 10.669681396721238 -6.754823508992586 24.99150006409084 1.102200459614104 1.012826767509149 0.16427944102248482 0.10060884279526278 245.6034002072783 927760.5217920782 0.014800596231561696 0.03025818230897845 1.758638153915296e-07 6.754823508992586 -0.08937369210495505 RS(ph)SSGSGGGGTAGAR ddPTM_A549_MK2206_60min_R1 1 RSSSGSGGGGTAGAR 15 1 Q9NWM3-2;Q9NWM3 Q9NWM3-2 CUEDC1 CUE domain-containing protein 1 1 RS(0.492)S(0.492)S(0.015)GSGGGGTAGAR 73.11 0.00036631 22955000.0 433.96 313.72 147.38 222.04 362.89 258.24 0.0 267.88 324.06 616.69 683.25 True False 507.2018386966411 329.68700799353854 168.28070013645114 276.43980996775434 309.509361717476 285.5667853941615 0.0 305.8528103480934 250.6609274174827 477.37930069019376 513.5801682593076 0.9875806544783754 0.6419387436842752 0.3276619903506202 0.5382602893423629 0.6026505321778783 0.5560315663317792 0.0 0.5955308036615381 0.48806582284330635 0.9295127230247022 1.0 9.004445684083953 -10.601831071568187 0.8503512924685536 1.0048278081965232 0.513960953100343 0.3549133588835277 0.22621631090357194 0.5188437614544167 0.6597569140656215 0.15974317533448082 0.0420230335969225 2.501318115429443e-11 10.601831071568187 -0.4908668550961802 RS(ph)SSGSGGGGTAGAR ddPTM_A549_PD325901_60min_R1 1 RSSSGSGGGGTAGAR 15 1 Q9NWM3-2;Q9NWM3 Q9NWM3-2 CUEDC1 CUE domain-containing protein 1 1 RS(0.495)S(0.495)S(0.01)GSGGGGTAGAR 107.57 1.7236000000000001e-06 21335000.0 215.5 159.65 187.2 237.21 249.94 91.44200000000001 124.25 149.55 154.95 372.69 261.93 True False 237.3774013572848 173.10426579172378 199.90451772504792 251.8619229570027 232.38507664619047 90.69732666949847 128.97840174220883 146.56710793029464 148.4379903531398 349.1582897963267 229.71427051107344 1.033359402657755 0.7535633959814405 0.8702311670942162 1.096413916282409 1.0116266443925097 0.3948266969558009 0.5614731790726576 0.6380409349589334 0.6461853241546189 1.5199677800578586 1.0 7.843696673639236 RS(ph)SSLGSYDDEQEDLTPAQLTR ddPTM_A549_MK2206_60min_R1 1 RSSSLGSYDDEQEDLTPAQLTR 22 1 E9PGM7;O94988-6;O94988-5;O94988-1;O94988;O94988-3 E9PGM7 FAM13A Protein FAM13A 1 RS(0.33)S(0.33)S(0.273)LGS(0.066)Y(0.001)DDEQEDLTPAQLTR 68.516 0.00029381 2792500.0 862.54 1087.2 776.82 810.87 1202.2 947.04 956.74 787.68 1494.4 1327.7 1481.3 True False 1008.1156649216539 1142.533836193342 886.9847569547976 1009.5331864013381 1025.35797254471 1047.2551442057254 1130.5672737568475 899.3360521688305 1155.9207860664267 1027.7716478723034 1113.4523281997986 0.9053963419803969 1.0261183233956337 0.7966077527439832 0.9066694287967637 0.9208817895261693 0.9405478058489499 1.015371062706133 0.8077005448655842 1.038141244839184 0.9230495296857285 1.0 10.120824075978613 -8.815917685781475 24.999996383510513 1.0180112240066004 0.9188017464041088 0.12477334258948491 0.07303105909248343 74.85926322091066 34352.37476982807 0.011032414912716476 0.011744903493433965 1.5278556136629216e-09 8.815917685781475 -0.09920947760249155 RS(ph)SSMSYVDGFIGTWPK ddPTM_A549_PD325901_60min_R1 1 RSSSMSYVDGFIGTWPK 17 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 RS(0.325)S(0.325)S(0.325)MS(0.021)Y(0.005)VDGFIGTWPK 71.148 0.00045461 2606500.0 2562.4 2507.6 2375.8 2724.6 2740.6 2674.9 2185.3 2603.8 3124.6 3131.2 2958.6 True False 2822.5329616608205 2718.9242524229658 2537.036074845987 2892.8923539844404 2548.109710556731 2653.116501260268 2268.4627873420436 2551.865166358415 2993.2839280891926 2933.495497626066 2594.710956110647 1.0878024602369074 1.04787172768504 0.9777721363804189 1.1149189265846988 0.9820399087442984 1.022509461029589 0.8742641572463876 0.9834872590909101 1.1536097772431608 1.130567353067812 1.0 11.341358119811188 -8.71472379400516 24.99999564272858 1.072538288173517 1.0097124718758683 0.1996855164195367 0.07058722202357912 201.618083234558 107896.35740015838 0.013565176812636479 0.015381443017171172 1.9287511854378583e-09 8.71472379400516 -0.06282581629764872 RS(ph)SSPAELDLKDDLQQTQGK ddPTM_A549_PD325901_60min_R1 2 RSSSPAELDLKDDLQQTQGK 20 2 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 RS(0.333)S(0.333)S(0.333)PAELDLKDDLQQTQGK;RS(0.333)S(0.333)S(0.333)PAELDLKDDLQQTQGK 267.5 7.311599999999999e-112 36778000.0 5655.8 6390.7 5657.6 6744.3 8725.9 8196.9 7067.299999999999 8069.2 7931.900000000001 8195.5 8036.1 True False 6229.972652420097 6929.266717163602 6041.558757912562 7160.880093583381 8113.022886720788 8130.147164073536 7336.249968874951 7908.253475835063 7598.549826925264 7678.034731347225 7047.710645035074 0.8839711171753267 0.9831939854178161 0.8572370606856116 1.016057618459128 1.1511572048486693 1.1535869693800511 1.0409408584393496 1.122102463358966 1.0781585978247052 1.0894367147090804 1.0 12.782938977997826 -6.455998214131255 6.059103940051702 1.0609671031568444 0.9173809131714495 0.6473074588322819 0.05624719500559729 0.1430966322891801 9.977285370095329 0.008943594265445698 0.020858075229603156 3.4994660604599903e-07 6.455998214131255 -0.14358618998539485 RS(ph)SSPEDPERDEEVLNHVLR ddPTM_A549_MK2206_60min_R1 4 RSSSPEDPERDEEVLNHVLR 20 2 Q8TE67-3;Q8TE67;Q8TE67-2 Q8TE67-3 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 RS(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR;RS(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR;RS(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR;RS(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR 97.713 2.0545000000000003e-07 38895600.0 574.6 632.65 881.188 222.34 784.905 381.51 699.62 608.72 969.18 1050.54 995.7 True False 671.5784323787674 664.8491827333684 1006.1537087246514 276.81330998122195 669.4465142573658 421.8811349741579 826.7318979720361 695.0079241268162 749.6622774624326 813.2222843682833 748.4402100779981 0.8973040509258307 0.8883130192378114 1.3443341167089298 0.3698536052096587 0.8944555693868986 0.5636804774695254 1.1046064693476034 0.9286084776957487 1.0016328189853765 1.0865561115209643 1.0 9.547743259472838 RS(ph)SSPEDPERDEEVLNHVLR ddPTM_A549_PD325901_60min_R1 4 RSSSPEDPERDEEVLNHVLR 20 2 Q8TE67-3;Q8TE67;Q8TE67-2 Q8TE67-3 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 RS(0.429)S(0.429)S(0.142)PEDPERDEEVLNHVLR;RS(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR;RS(0.382)S(0.382)S(0.236)PEDPERDEEVLNHVLR;RS(0.333)S(0.333)S(0.333)PEDPERDEEVLNHVLR 157.9 1.7974e-27 48190800.0 2282.59 2481.8799999999997 2021.523 2526.7299999999996 2710.3900000000003 2743.91 2299.68 2446.9500000000003 2345.48 2594.3200000000006 2596.11 True False 2514.316856446056 2691.036737758616 2158.7157071853217 2682.800373479815 2520.0215567378905 2721.5645067004625 2387.195580833181 2398.14366265486 2246.90763222641 2430.5141924505792 2276.8049280972114 1.1043180842670346 1.1819355732015169 0.9481337994948121 1.178318063340589 1.1068236569761565 1.1953437350361626 1.048484897135314 1.053293425826803 0.9868687494910742 1.0675109503043052 1.0 11.152794974326099 -8.314195559093662 1.889005094495595 0.9942524430800949 1.1150799454899996 0.2533239418278339 0.06843236468262694 0.23154813719845058 1.6102674201345126 0.010552785075304745 0.013344189106133525 4.850700280895841e-09 8.314195559093662 0.1208275024099047 RS(ph)SSSGDQSSDSLNSPTLLAL ddPTM_A549_PD325901_60min_R1 2 RSSSSGDQSSDSLNSPTLLAL 21 1 P15408-3;P15408-2;P15408 P15408-3 FOSL2 Fos-related antigen 2 1 RS(0.457)S(0.457)S(0.081)S(0.003)GDQS(0.001)S(0.001)DSLNSPTLLAL;RS(0.45)S(0.45)S(0.064)S(0.01)GDQS(0.013)S(0.013)DSLNSPTLLAL 98.165 4.5471e-07 21921100.0 1911.97 1986.42 1862.46 1869.04 1822.46 1835.46 2226.52 2148.75 2109.69 2365.11 2299.23 True False 2106.0717868820775 2153.8225847415956 1988.857735481798 1984.48635590218 1694.4566967456851 1820.5126223048237 2311.2514369984947 2105.8914955882346 2021.0270659445985 2215.776550967801 2016.4392860198338 1.0444508800655068 1.0681316316708633 0.986321655836969 0.9841537851701331 0.8403212080291805 0.9028353270671781 1.146204328105796 1.0443614693428072 1.0022751887232966 1.0988560708621338 1.0 10.977594252232429 -5.76349052286865 24.96842253426897 0.9945237121691292 1.056291265815062 0.06425325457946685 0.07926164986575249 92.31462007382557 1123814.3225388639 0.010274554403238456 0.03442111832326128 1.7238897091677188e-06 5.76349052286865 0.06176755364593289 RS(ph)STGSYEER ddPTM_A549_PD325901_60min_R1 1 RSSTGSYEER 10 1 Q7Z674;H7C434;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 RS(0.636)S(0.36)T(0.005)GSYEER 109.84 8.476200000000001e-05 11721000.0 733.7 788.68 807.63 424.99 827.9 706.6 595.64 773.9 698.71 806.82 1037.0 True False 808.1846838786072 855.1448314727004 862.4406284737206 451.24066707768037 769.7511600999484 700.8456838724836 618.3074061467142 758.463957387195 669.345648529476 755.8772475072377 909.4555740846143 0.8886466880936561 0.9402821378421053 0.9483042966027062 0.49616570609494953 0.8463867637236911 0.7706211318545154 0.6798654313258273 0.8339758191603857 0.735984986625857 0.8311315792066519 1.0 9.8288593552895 -10.832981151290392 1.0113191104027424 1.0034373858788708 0.7888215511522032 0.06323493304667349 0.13143225609949477 0.5850046335294529 1.03383055546483 0.09206949878204436 0.02122445176509578 1.468990031540892e-11 10.832981151290392 -0.21461583472666756 RS(ph)STSGDT(ph)EEEEEEEVVPFSSDEQK ddPTM_A549_MK2206_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.477)S(0.398)T(0.135)S(0.283)GDT(0.708)EEEEEEEVVPFSSDEQK 143.48 2.2191999999999996e-32 23515000.0 2181.0 2038.6 2086.2 2205.8 2736.5 2144.0 2367.0 2056.4 3147.5 2799.1 3170.6 True False 2549.0994796694954 2142.3560324353807 2382.0545299542987 2746.2210990221247 2333.9644750196294 2370.876656927982 2797.0532610557275 2347.9009974608757 2434.5962755246765 2166.7813659406224 2383.2525158916364 1.069588498353399 0.8989211248703413 0.9994973315125655 1.1522996747974448 0.9793190018500548 0.9948071558170476 1.1736285779223345 0.985166692075206 1.021543566739436 0.9091698640796246 1.0 11.218716104056057 -3.4242278078128114 13.06088629633631 1.0195752290933167 1.118082875846756 0.0 0.0824645664890268 0.0 0.0 0.009142380105120487 0.0 0.00037650625199964156 3.4242278078128114 0.09850764675343937 RS(ph)STSGDT(ph)EEEEEEEVVPFSSDEQKR ddPTM_A549_MK2206_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.294)S(0.294)T(0.294)S(0.294)GDT(0.824)EEEEEEEVVPFSSDEQKR 48.097 0.0053457 7728800.0 0.0 381.7 339.96 0.0 329.01 354.46 308.04 296.37 400.92 436.72 292.14 True False 0.0 401.12689962748203 388.17143994020876 0.0 280.6130648369116 391.9687219284948 364.0068806656557 338.3813550950592 310.11226013768203 338.0646486847876 219.59357534617496 0.0 1.8266786676027822 1.7676812234979178 0.0 1.2778746572824062 1.784973541737647 1.6576390274251993 1.5409437847242253 1.4122100778622975 1.5395015457617587 1.0 7.778692035776304 -6.962613075706575 24.999965742662887 1.3126387215065365 0.9784575898659195 0.14094435465362387 0.5885640626053321 393.01832683464295 262802.8008091146 0.08434493003725844 0.15939666159590904 1.0899006818828597e-07 6.962613075706575 -0.334181131640617 RS(ph)STSGDTEEEEEEEVVPFSSDEQK ddPTM_A549_MK2206_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.453)S(0.341)T(0.069)S(0.069)GDT(0.069)EEEEEEEVVPFSSDEQK 141.75 2.5798e-32 70497000.0 787.36 892.02 862.26 806.45 1008.9 1264.7 982.02 940.65 1171.4 1112.7 900.12 True False 920.2471188961825 937.4200078745263 984.5414337064482 1004.030286202916 860.4921464817483 1398.5297145600841 1160.440322527227 1073.9900181198084 906.0797703414157 861.3402971962877 676.5953619518003 1.3601144356672956 1.385495763923529 1.4551406779767218 1.4839449731173915 1.271797288115387 2.0670104957942548 1.7151171701497638 1.5873446353838854 1.3391752608643561 1.2730508449120115 1.0 9.40214947729375 -9.588182730262126 0.9817595987145553 1.062199058559518 1.5383828000437534 0.31573756457971025 0.21758963253644154 0.31059073229084055 0.6262217894784253 0.06624776993464492 0.045122523883147345 2.581173928092264e-10 9.588182730262126 0.47618374148423537 RS(ph)STSGDTEEEEEEEVVPFSSDEQK ddPTM_A549_PD325901_60min_R1 2 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.537)S(0.373)T(0.07)S(0.019)GDT(0.001)EEEEEEEVVPFSSDEQK;RS(0.393)S(0.393)T(0.091)S(0.091)GDT(0.032)EEEEEEEVVPFSSDEQK 166.28 1.2221e-41 137613000.0 1352.59 1526.7 1846.54 1581.36 1678.8899999999999 2059.43 1831.05 1727.65 1719.25 1793.72 1964.1599999999999 True False 1489.9039410758696 1655.360366954116 1971.8573085470614 1679.0370156708645 1560.9705582560734 2042.6586848818413 1900.7316097390071 1693.1906654347936 1646.9959013529253 1680.4642130818304 1722.5807718361002 0.864925445259545 0.9609769213838757 1.1447110874488964 0.9747217913509958 0.9061813435849708 1.1858130070177026 1.1034208908027086 0.9829383289992377 0.9561211458301553 0.97555031413164 1.0 10.750355917168035 -3.4803082569962704 16.161755129445435 0.9976472124927774 0.5507796501796628 0.0 0.09463237597958739 0.0 0.0 0.01212805310279341 0.0 0.0003308961719899417 3.4803082569962704 -0.44686756231311464 RS(ph)STSGDTEEEEEEEVVPFSSDEQKR ddPTM_A549_MK2206_60min_R1 3 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.377)S(0.377)T(0.146)S(0.06)GDT(0.04)EEEEEEEVVPFSSDEQKR;RS(0.482)S(0.482)T(0.02)S(0.007)GDT(0.011)EEEEEEEVVPFSSDEQKR;RS(0.446)S(0.446)T(0.103)S(0.006)GDTEEEEEEEVVPFSSDEQKR 259.27 2.5015999999999993e-125 82508400.0 5367.3 7490.0 6288.8 6218.2 8309.3 6069.6 6182.3 5679.1 8756.5 9206.7 9069.1 True False 6273.169022113749 7871.209007623375 7180.646403976893 7741.659279145608 7087.012977263148 6711.881043325601 7305.543885012602 6484.129816514327 6773.166731257134 7126.900075669151 6816.992175573339 0.9202253516722201 1.15464545138067 1.0533452612292267 1.1356415087119416 1.0396099620969712 0.9845810102842171 1.071666755198846 0.9511716677258739 0.9935711464547018 1.0454610907734756 1.0 12.734919611805594 -7.003174103296805 24.80973449962413 0.9990713643690843 1.0734259340154182 0.1452665352616811 0.06345979624396343 120.67461943216503 943244.1593545099 0.00794625438469512 0.01480504553556596 9.927180002479107e-08 7.003174103296805 0.07435456964633391 RS(ph)STSGDTEEEEEEEVVPFSSDEQKR ddPTM_A549_PD325901_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.415)S(0.415)T(0.127)S(0.04)GDT(0.004)EEEEEEEVVPFSSDEQKR 94.495 3.0971e-09 19977000.0 1521.1 1749.2 1297.1 1946.7 1690.7 1971.5 1737.2 1636.8 1811.0 2377.6 1696.8 True False 1675.520952225364 1896.6112228179343 1385.1290060959388 2066.9432377235235 1571.9510645983607 1955.4447576487412 1803.310096632315 1604.1527399552397 1734.889967922144 2227.4779302362454 1488.10435690142 1.1259431802983153 1.274514931712935 0.9308009882990331 1.3889773443223974 1.056344642301518 1.3140508248496985 1.2118169591192023 1.0779840355386496 1.1658389143719659 1.4968559966280681 1.0 10.539259987119467 -10.594521306127369 0.5329400738102199 0.9733701330841157 1.1800478626572872 0.0 0.19150620917445432 1.4276889668565123 0.5919961981596312 0.147015235345001 0.025859337932651584 2.5437749945754366e-11 10.594521306127369 0.20667772957317154 RS(ph)STSSEPTPTVK ddPTM_A549_MK2206_60min_R1 2 RSSTSSEPTPTVK 13 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 RS(0.468)S(0.468)T(0.057)S(0.007)SEPTPTVK;RS(0.414)S(0.414)T(0.017)S(0.153)S(0.001)EPTPTVK 138.66 3.3609e-09 224130000.0 7837.6 8187.1 7277.9 7460.1 9546.4 6559.2 6187.9 6259.9 8847.8 9899.9 8961.7 True False 9160.395269077326 8603.788420068531 8310.015656962127 9287.82483489661 8142.13720603961 7253.290190355416 7312.161332525026 7147.259995139725 6843.787427033279 7663.505714220842 6736.2625596625485 1.35986315674967 1.277234719381178 1.2336240731950352 1.3787801102814914 1.208702471723057 1.0767528916982665 1.085492328685497 1.0610126805238074 1.015962095660374 1.1376494972317028 1.0 12.717732656163319 -7.309489343226572 1.249198402059427 1.0129395402616324 1.31062936913743 0.7855873106837918 0.05889666309103409 0.09574366024461878 0.29404450787777703 0.007336639183677917 0.014861856562104266 4.903550550391977e-08 7.309489343226572 0.29768982887579765 RS(ph)STSSEPTPTVK ddPTM_A549_PD325901_60min_R1 2 RSSTSSEPTPTVK 13 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 RS(0.403)S(0.403)T(0.115)S(0.062)S(0.016)EPTPTVK;RS(0.308)S(0.308)T(0.242)S(0.113)S(0.029)EPTPTVK 99.273 6.5965e-05 217122000.0 9571.4 10739.5 8784.4 9125.6 11133.7 12027.599999999999 10538.5 12478.3 14605.2 16000.900000000001 15100.7 True False 10543.081481907737 11644.555355278535 9380.562208888416 9689.267586258686 10351.707321179845 11929.65121333807 10939.54838438848 12229.41051746302 13991.394234951124 14990.60044326932 13243.409631224245 0.7961002321524593 0.8792717041556987 0.7083192674771368 0.731629380655425 0.7816497117761443 0.9007990801108574 0.8260371527432099 0.9234336819597803 1.0564797604661673 1.131929077231417 1.0 13.692986983928488 -8.273579730915959 1.3442740964971551 1.0276568402379578 0.7896395191102321 0.764996405451856 0.062383767565062385 0.13834516615107903 0.4863766515346039 0.010625435168345899 0.013781026205196903 5.326234324920726e-09 8.273579730915959 -0.23801732112772567 RS(ph)STVAPAQPDGAESEWTDVETR ddPTM_A549_MK2206_60min_R1 2 RSSTVAPAQPDGAESEWTDVETR 23 1 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 RS(0.476)S(0.476)T(0.048)VAPAQPDGAESEWTDVETR;RS(0.451)S(0.451)T(0.099)VAPAQPDGAESEWTDVETR 181.63 6.631299999999999e-50 80695000.0 3833.1000000000004 4532.2 3157.2 2491.0 5756.4 4733.0 3941.8999999999996 3784.3 6049.9 5867.6 6472.7 True False 4480.033569702496 4762.869621408632 3604.9384344606015 3101.295111825239 4909.641185456967 5233.84291848887 4658.092205219928 4320.736113932697 4679.607309705081 4542.105084774819 4865.349952567902 0.9208039736870236 0.9789366988688695 0.7409412415561057 0.6374248804422372 1.0091034012601063 1.075738224282609 0.9574012662257553 0.8880627613749015 0.961823374541684 0.9335618463328674 1.0 12.248327862880524 RS(ph)STVAPAQPDGAESEWTDVETR ddPTM_A549_PD325901_60min_R1 1 RSSTVAPAQPDGAESEWTDVETR 23 1 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 RS(0.472)S(0.472)T(0.056)VAPAQPDGAESEWTDVETR 174.97 5.619399999999999e-41 40567000.0 6387.9 7038.6 6373.8 6150.0 6616.4 6360.4 6029.7 5702.5 7667.5 7559.1 8233.7 True False 7036.394905476561 7631.767523968846 6806.364396773029 6529.871532336608 6151.686889340858 6308.603011183901 6259.163533078446 5588.759163975292 7345.2616394494935 7081.817135955927 7221.007097724676 0.9744340104157652 1.0568840911918782 0.9425782726231774 0.9042882030117595 0.8519153638942194 0.8736458676479806 0.8667992495189064 0.7739584088951108 1.0172073701137851 0.9807243006570916 1.0 12.817984345260625 RS(ph)SVAQEDSK ddPTM_A549_MK2206_60min_R1 2 RSSVAQEDSK 10 1 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RS(0.659)S(0.341)VAQEDSK;RS(0.5)S(0.5)VAQEDSK 110.55 7.6982e-05 45663000.0 10038.7 10832.6 9691.2 6349.9 5958.799999999999 5286.700000000001 4564.9 5454.0 7071.8 13251.7 11842.1 True False 11732.987137348997 11383.933070224428 11065.557885482262 7905.625785057845 5082.26841357463 5846.135084972562 5394.283240977314 6227.121202174491 5470.048591344055 10258.131766294646 8901.37974466673 1.3181088183973755 1.2788953394607303 1.2431283916532379 0.8881348747978658 0.5709528813911884 0.6567672936855974 0.6060052930793457 0.6995680872850613 0.614516934256337 1.1524204180189948 1.0 13.119813260798345 -6.310777742112839 3.29541681238325 0.7611800673479727 1.2907559638962316 0.649290049978318 0.16788284328568293 0.11829130601096095 2.5819964872884476 0.024488114617259495 0.06434888721865037 4.889024998372414e-07 6.310777742112839 0.5295758965482589 RS(ph)SVAQEDSK ddPTM_A549_PD325901_60min_R1 2 RSSVAQEDSK 10 1 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RS(0.5)S(0.5)VAQEDSK;RS(0.641)S(0.359)VAQEDSK 88.311 0.00029547 83643000.0 11469.7 12122.1 11044.6 9763.9 12904.0 10846.3 10015.3 10624.8 13224.7 15753.900000000001 14132.5 True False 12634.095500453124 13143.671909513652 11794.152972575132 10366.993927574205 11997.667556383301 10757.971328879297 10396.437722082452 10412.880029005642 12668.91184913307 14759.1960654226 12394.292093298753 1.0193478905732767 1.0604616875714965 0.9515793950791187 0.8364329200519124 0.9679994198999154 0.8679778762593332 0.8388085131302913 0.8401351162795005 1.0221569536821549 1.1908058930935221 1.0 13.597388253019053 -8.799709485372025 24.9969674274572 1.010463040307349 0.9223828778813482 0.2947632479330532 0.08957867769909737 181.1663780326486 118332.08211564727 0.013289190552281914 0.01414755857008109 1.585953737114736e-09 8.799709485372025 -0.0880801624260007 RS(ph)SVSTIQVEWPEPDLAPAIK ddPTM_A549_MK2206_60min_R1 2 RSSVSTIQVEWPEPDLAPAIK 21 1 Q96B33 Q96B33 CLDN23 Claudin-23 1 RS(0.46)S(0.46)VS(0.04)T(0.04)IQVEWPEPDLAPAIK;RS(0.394)S(0.394)VS(0.106)T(0.106)IQVEWPEPDLAPAIK 90.09700000000001 1.159e-06 34093000.0 2409.05 2687.3 2301.7 1987.56 3992.3999999999996 2865.2 2689.7 2889.3999999999996 3974.9 3118.3 4113.4 True False 2815.638744382302 2824.0720916136574 2628.115670403512 2474.512289224959 3405.1232487002994 3168.3935622341664 3178.383673959271 3298.9812984163846 3074.591496610975 2413.8738642465933 3091.92925593536 0.9106413864344786 0.913368922071061 0.849992174095996 0.800313359199539 1.1012940358074892 1.0247302897218697 1.027961318279825 1.0669653233765168 0.9943925756738765 0.780701518190576 1.0 11.59429159510246 -6.757019822369859 24.999967311119377 1.01310723462498 0.8704506181739685 0.3623864845747382 0.082220828402274 48.24912580801229 272925.6020186613 0.006483666721787641 0.013138435636022594 1.7497668227315082e-07 6.757019822369859 -0.14265661645101158 RS(ph)SVSTIQVEWPEPDLAPAIK ddPTM_A549_PD325901_60min_R1 2 RSSVSTIQVEWPEPDLAPAIK 21 1 Q96B33 Q96B33 CLDN23 Claudin-23 1 RS(0.345)S(0.345)VS(0.13)T(0.18)IQVEWPEPDLAPAIK;RS(0.49)S(0.49)VS(0.01)T(0.01)IQVEWPEPDLAPAIK 114.91 6.472399999999999e-15 40912000.0 4029.0 4324.9 3783.2 4683.2 3931.1000000000004 4884.8 4051.3 4837.1 4685.9 4530.2 5546.1 True False 4438.021114006965 4689.374501237868 4039.950702229709 4972.470627681103 3654.993097558771 4845.019808350277 4205.474438456425 4740.620245868457 4488.9679186562 4244.162398871234 4863.964859624573 0.9124286959485794 0.9641053413366597 0.8305879706831463 1.022308090454606 0.7514431545134318 0.9961050188845817 0.8646185899420797 0.9746411379777861 0.9229030324455679 0.8725725866364135 1.0 12.247917090534767 -10.665391241180867 0.3890638625461281 1.0258135637260188 0.9075064566083417 0.0 0.0828999199707404 3.047114816190676 0.6016070947455758 0.14845069763503804 0.021601376781255295 2.160771081225913e-11 10.665391241180867 -0.11830710711767711 RS(ph)SVTVEER ddPTM_A549_PD325901_60min_R1 1 RSSVTVEER 9 1 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 RS(0.592)S(0.407)VT(0.001)VEER 64.55 0.0026028 3143200.0 456.34 400.51 449.76 442.79 596.02 458.29 372.28 287.97 636.67 565.65 636.42 True False 502.6673008602475 434.26238328996703 480.28341822658973 470.1401326509474 554.1576113573756 454.5578381855652 386.4473191194328 282.2262124419052 609.9129739795648 529.9347624655672 558.1443745987755 0.9006044380929076 0.7780466901635235 0.8605003294565919 0.8423271003831396 0.9928571111295965 0.8144090648809746 0.6923787763645063 0.5056509127137306 1.0927512696298398 0.9494582165170314 1.0 9.12449454046087 -8.861320340549392 23.040099615248803 1.04380422321131 0.8042808723161915 0.37377349371647905 0.12253789102735797 4.8237212204515325 1104.2241670218832 0.021640883151148472 0.02303836785985884 1.3761939980831566e-09 8.861320340549392 -0.23952335089511856 RS(ph)SYLLAITTER ddPTM_A549_MK2206_60min_R1 1 RSSYLLAITTER 12 1 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 RS(0.499)S(0.499)Y(0.001)LLAITTER 57.973 0.005481100000000001 3107200.0 374.72 316.91 376.66 273.18 454.12 348.67 420.06 369.62 486.21 469.3 599.16 True False 437.9635749755862 333.039365367947 430.07605179397297 340.1091122635164 387.3195495691266 385.56602797158547 496.37946465528904 422.01476691377627 376.0842113178247 363.2848040569948 450.372036025242 0.972448420290108 0.7394761191373818 0.9549350701025063 0.7551736898790367 0.859999108708913 0.8561056129825424 1.1021542745772708 0.9370359017808193 0.8350523150525855 0.8066326836434263 1.0 8.81497344183727 -7.569215129197425 24.999996894035288 0.9357349530919095 0.8505883626569056 0.13975225319646178 0.09812238673942465 177.86664647356378 95964.220076947 0.014639743446093163 0.021714253025987222 2.6964034292843166e-08 7.569215129197425 -0.08514659043500383 RS(ph)SYLLAITTER ddPTM_A549_PD325901_60min_R1 4 RSSYLLAITTER 12 1 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 RS(0.5)S(0.5)Y(0.001)LLAITTER;RS(0.5)S(0.5)YLLAITTER;RS(0.5)S(0.5)YLLAITTER;RS(0.5)S(0.5)YLLAITTER 100.41 0.00010182 11055100.0 2014.94 2189.55 1625.9 1461.47 2407.5200000000004 2350.31 1811.6200000000003 2376.8199999999997 3125.4 2365.97 2350.7000000000003 True False 2219.4952254795694 2374.0710627263948 1736.243351330958 1551.7416826608103 2238.4241006931125 2331.1698546027965 1880.5621904565037 2329.4124605207803 2994.05030687127 2216.5822504210328 2061.578802315046 1.0765997511165675 1.1515791004740816 0.842191115557284 0.752695788741272 1.0857814885268895 1.130769220165154 0.9121951527366939 1.129916769567562 1.4523094162149452 1.0751867684766288 1.0 11.00953389288602 -8.51531267260073 24.677756578072234 1.2176706860396462 0.9950201095228488 0.20837963308800023 0.1565266993967956 353.0289178693168 1151453.6733352456 0.0330459308711449 0.038266818190125444 3.05272249820956e-09 8.51531267260073 -0.22265057651679743 RS(ph)TEPSVTPDLLNFK ddPTM_A549_MK2206_60min_R1 2 RSTEPSVTPDLLNFK 15 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 RS(0.498)T(0.498)EPS(0.005)VTPDLLNFK;RS(0.494)T(0.494)EPS(0.005)VT(0.006)PDLLNFK 99.044 4.4399000000000005e-06 6142800.0 864.06 902.74 926.94 956.83 1450.26 917.01 1140.77 1018.39 1579.5900000000001 1450.47 1150.3200000000002 True False 1009.8922037612213 948.6856100857045 1058.39403029232 1191.2533929537315 1236.9286751478055 1014.0473895380266 1348.0331426339428 1162.7499011885732 1221.8153870869025 1122.8078196048345 864.6637967830906 1.1679593936029713 1.097172812849584 1.2240526713735287 1.3777070317800864 1.4305313576787826 1.1727649443757275 1.5590257712294506 1.3447422056000113 1.4130525547994084 1.2985484344113252 1.0 9.75599547512614 -10.860880704239527 1.1073777392534219 0.9999629574777092 1.3175703231804505 0.020599226553336236 0.1554223440052868 0.38974503336429017 0.8482628745539819 0.09503002180485474 0.023077540615948293 1.3775878246522052e-11 10.860880704239527 0.3176073657027413 RS(ph)TEPSVTPDLLNFK ddPTM_A549_PD325901_60min_R1 2 RSTEPSVTPDLLNFK 15 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 RS(0.594)T(0.403)EPS(0.003)VTPDLLNFK;RS(0.499)T(0.499)EPS(0.003)VTPDLLNFK 99.891 3.5582e-06 10639900.0 1334.46 1148.66 1414.31 1333.8899999999999 1678.4499999999998 1158.27 1307.53 1615.73 1577.4 1465.9 1570.05 True False 1469.9333968224707 1245.461609422621 1510.293581536926 1416.2813558160121 1560.5614623381546 1148.8374331431942 1357.2887696578696 1583.502997634336 1511.1073635562623 1373.3428238279416 1376.9438033669708 1.0675333250551817 0.9045115758371235 1.096844749832115 1.0285687421322869 1.1333515997691357 0.8343386493580931 0.9857256093814143 1.1500127991877929 1.097435755810243 0.9973848028291178 1.0 10.4272539652256 RS(ph)TEPSVTPDLLNFKK ddPTM_A549_MK2206_60min_R1 1 RSTEPSVTPDLLNFKK 16 2 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 RS(0.498)T(0.498)EPS(0.003)VTPDLLNFKK 54.805 0.0027372 1397700.0 554.11 363.07 439.25 693.5 998.1 726.09 493.35 462.19 913.11 743.51 1002.2 True False 647.6302213111713 381.5487122026461 501.5422549527491 863.407531132398 851.2808121750749 802.9243618604663 582.9853089741628 527.7068478975117 706.292042937042 575.5505746098786 753.3260806871245 0.8596944111113931 0.50648546756091 0.6657704648898946 1.146127226001343 1.130029656478379 1.0658390601956886 0.7738817544222146 0.700502559816035 0.9375648355262282 0.764012542994538 1.0 9.55713066710296 -6.233771843781651 22.591833956094142 0.9642064289511058 0.6602333160206475 0.3387880985237629 0.16017242804222107 159.94197052005055 130598.76484913536 0.021178036602513505 0.056006448721152575 5.83751697165501e-07 6.233771843781651 -0.30397311293045826 RS(ph)TEPSVTPDLLNFKK ddPTM_A549_PD325901_60min_R1 1 RSTEPSVTPDLLNFKK 16 2 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 RS(0.499)T(0.499)EPS(0.002)VTPDLLNFKK 69.737 0.00032902 2998000.0 503.74 858.44 777.43 929.26 730.83 1076.7 944.11 869.72 1026.8 974.09 1003.0 True False 554.879313966212 930.7837514954425 830.1910748663676 986.658279697417 679.4990220266279 1067.9317121787467 980.0386226868147 852.3727523178586 983.6471667931846 912.5857911607611 879.637358540857 0.6308046248588692 1.0581448621502698 0.9437878766807825 1.1216648203005912 0.7724763113219535 1.214059068557789 1.1141393816111942 0.969004720003906 1.118241690444866 1.0374568363883032 1.0 9.780765067088456 -5.26027315780878 24.706163356249288 1.0444267805736354 0.6308044700490696 0.518457247403299 0.1116136020952614 46.24070104373749 979451.5972529682 0.014139883261933143 0.11994523642027667 5.491953383065712e-06 5.26027315780878 -0.4136223105245658 RS(ph)TGVVNIPAAECLDEYEDDEAGQK ddPTM_A549_MK2206_60min_R1 1 RSTGVVNIPAAECLDEYEDDEAGQK 25 1 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQK 164.7 2.8747e-41 9670300.0 770.34 1348.0 1046.2 843.86 1726.1 1622.5 987.89 1034.5 1868.1 1653.1 1833.7 True False 900.3545589952314 1416.6074422264767 1194.5668915914998 1050.6057378823148 1472.1929765508435 1794.1918730716654 1167.3768255447171 1181.1435430233782 1444.9783327427012 1279.6635618721882 1378.341682454581 0.653215795804608 1.0277621726593593 0.8666696413506041 0.7622244551230383 1.0680900064845533 1.3017032684352472 0.846942989829508 0.8569308742952416 1.0483455235638324 0.9284080849919125 1.0 10.428717852297098 -4.285171338680692 0.6001197353860819 1.0128661796483487 1.16402556254479e-10 0.22555123751853046 0.14657654396345385 9.922597708274196 1.0308293590116837 0.02445131919388634 9.13651510798064 5.1859540132568655e-05 4.285171338680692 -1.012866179531946 RS(ph)TGVVNIPAAECLDEYEDDEAGQK ddPTM_A549_PD325901_60min_R1 2 RSTGVVNIPAAECLDEYEDDEAGQK 25 1 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQK;RS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQK 135.72 2.8361e-24 21356900.0 5714.9 5860.400000000001 6092.5 6631.2 6014.0 7701.7 5900.2 6730.0 4794.4 5838.700000000001 6325.1 True False 6295.072440912976 6354.276475075587 6505.97368717871 7040.794163452111 5591.597387173683 7638.979908690497 6124.7353397133265 6595.764870417139 4592.908040975111 5470.043485561224 5547.1527981124345 1.1348294647760633 1.1455023336003647 1.1728491938048902 1.2692627046163083 1.008012144370058 1.3770992411259813 1.1041223421495492 1.1890360894081595 0.8279757576784201 0.9860992989813713 1.0 12.437531750172761 -8.75056757090658 24.920288963719027 0.9187663305373841 1.1759663169215366 0.5371187353748741 0.09756362432140557 102.55026317524322 235064.8570198256 0.01669274522075981 0.018836016483716158 1.775956929627071e-09 8.75056757090658 0.25719998638415253 RS(ph)TGVVNIPAAECLDEYEDDEAGQKER ddPTM_A549_MK2206_60min_R1 3 RSTGVVNIPAAECLDEYEDDEAGQKER 27 2 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER;RS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER;RS(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER 152.14 5.612e-34 66667900.0 3730.91 3753.98 3091.52 3174.42 5152.1 3310.33 2886.63 3571.3999999999996 5730.7 5171.1 4954.4 True False 4360.5963960081235 3945.041547455003 3529.9440228378426 3952.153042505131 4394.232914945604 3660.6269233807857 3411.09330585606 4077.6568869537873 4432.705600047425 4002.9449185150743 3724.0857455161545 1.170917291917442 1.0593315559946175 0.9478686217383526 1.0612411508686588 1.1799494467162348 0.9829598923140334 0.9159545560848212 1.0949417294871195 1.1902802198860372 1.0748799012844077 1.0 11.86267057539091 RS(ph)TITSR ddPTM_A549_MK2206_60min_R1 1 RSTITSR 7 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 RS(0.758)T(0.24)IT(0.002)SR 74.267 0.015 15805000.0 1512.4 1671.8 1827.5 1465.1 2151.8 1576.9 1405.3 1551.6 2703.1 2378.4 2863.5 True False 1767.6561453700795 1756.887479164853 2086.666979911553 1824.0495657708377 1835.2730704722242 1743.7665113384962 1660.624819502162 1771.544051575712 2090.8521659637045 1841.1177881294614 2152.413921420456 0.8212435943563955 0.8162405296121756 0.9694543224913198 0.8474436759668796 0.852658056244619 0.8101445981113714 0.7715174126016874 0.8230498947928221 0.9713987375550309 0.8553734808193588 1.0 11.071739827685839 -8.804127910852632 5.803961385174644 0.9871828268176944 0.8400336128024123 0.2944719991121302 0.06139022485898669 0.08393676340359277 6.803967165051214 0.008642014953057392 0.009244382292590793 1.5699003603551952e-09 8.804127910852632 -0.14714921401528214 RS(ph)TITSR ddPTM_A549_PD325901_60min_R1 1 RSTITSR 7 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 RS(0.612)T(0.387)IT(0.001)SR 44.318000000000005 0.033918000000000004 43794000.0 653.61 511.84 565.63 757.55 689.35 675.3 539.95 716.79 702.27 870.53 802.49 True False 719.9640060377491 554.974553102636 604.0170532095021 804.3421429791215 640.9324341283967 669.8005806950017 560.4980927219772 702.4930611391229 672.7560341097096 815.5645872344212 703.7888174032425 1.0229830145556842 0.7885526728746786 0.8582362184129799 1.1428742871290407 0.9106885734462705 0.9517067678999979 0.796400964127332 0.9981588848357941 0.9559061148370699 1.15882004241499 1.0 9.458998780865633 -9.469238286743936 0.7709111435184349 0.9930604847422154 0.9289709063520808 0.12684846137737815 0.10874339043363301 1.227803085039446 1.574371282557641 0.03248455985473172 0.021444050353767 3.394389796345119e-10 9.469238286743936 -0.06408957839013463 RS(ph)TMVGTPYWMAPEVVTR ddPTM_A549_MK2206_60min_R1 1 RSTMVGTPYWMAPEVVTR 18 1 Q13177;H7C1X3;H0YCG5;A0A087X294;O75914-2;O75914;O75914-4;O75914-3;E9PM17;B3KNX7;Q13153;Q13153-2 Q13177;E9PM17 PAK2;PAK1;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 3;Serine/threonine-protein kinase PAK 1 1 RS(0.49)T(0.49)MVGT(0.02)PYWMAPEVVTR 52.483000000000004 0.006081800000000001 987140.0 681.11 505.56 434.02 379.92 649.1 486.39 451.14 700.89 869.07 726.79 885.51 True False 796.0647164592804 531.290844578648 495.57056230982874 473.00041705525706 553.6182498575707 537.8594669604482 533.1062983492527 800.2433038856027 672.2270326196128 562.6076342224227 665.6134281672879 1.195986563328777 0.7981973050656653 0.7445320982696243 0.7106233093247908 0.8317414078948396 0.8080658295031701 0.800924794767313 1.2022643624979248 1.009936104309877 0.8452468210737827 1.0 9.37854072865478 -8.22190263182664 24.77935585131639 1.0196411150234366 0.8293605023515465 0.25231751501630784 0.1421243154722902 416.19923035882533 260850.0319944586 0.02036862019620388 0.026295602163952846 5.999255635931904e-09 8.22190263182664 -0.19028061267189011 RS(ph)TMVGTPYWMAPEVVTR ddPTM_A549_PD325901_60min_R1 3 RSTMVGTPYWMAPEVVTR 18 1 Q13177;H7C1X3;H0YCG5;A0A087X294;O75914-2;O75914;O75914-4;O75914-3;E9PM17;B3KNX7;Q13153;Q13153-2 Q13177;E9PM17 PAK2;PAK1;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 3;Serine/threonine-protein kinase PAK 1 1 RS(0.481)T(0.481)MVGT(0.038)PYWMAPEVVTR;RS(0.478)T(0.478)MVGT(0.04)PY(0.003)WMAPEVVTR;RS(0.391)T(0.391)MVGT(0.208)PY(0.01)WMAPEVVTR 54.235 0.0019732 6709200.0 2439.1 2771.49 3148.73 3044.6099999999997 3116.75 3157.69 2583.77 3019.6 3199.2000000000003 3374.54 4220.45 True False 2686.7156364294833 3005.053188844999 3362.421752651657 3232.6686448889986 2897.8402322037873 3131.974819568781 2682.0967812431954 2959.3717091696267 3064.748749517683 3161.4709684973986 3701.3614056368488 0.7258722783292253 0.8118778091403251 0.9084283819275208 0.8733728730098952 0.7829119922714466 0.8461683354667983 0.7246243982440076 0.799536004417932 0.82800581020009 0.8541373354362953 1.0 11.853840293757182 -10.404350105088938 0.7360536003178517 1.0022355214367555 0.8125719047407873 0.21334377281788197 0.0671989287406584 0.3649534750624135 0.35491872788077516 0.03862408904563611 0.011121875669736847 3.94139439738798e-11 10.404350105088938 -0.1896636166959682 RS(ph)TPLKER ddPTM_A549_PD325901_60min_R1 1 RSTPLKER 8 2 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 RS(0.5)T(0.5)PLKER 46.606 0.012899 57095000.0 3478.7 3205.0 3512.5 3477.1 3399.3 3379.2 3223.1 3126.9 3700.9 3891.3 3744.4 True False 3831.8550631164126 3475.096597948478 3750.879372378368 3691.872569932943 3160.54489494837 3351.6809155701885 3345.756834247994 3064.5315264944056 3545.36404322643 3645.6026539065883 3283.8625377072617 1.166874380129124 1.0582344900388958 1.1422157076639297 1.1242469888860047 0.9624473797721782 1.0206520148405105 1.0188480168795206 0.9332094420231154 1.0796322935313074 1.1101568997013764 1.0 11.681178021912173 -6.738201802104391 24.980799409260065 1.023299256213533 1.1196546873416013 0.48432656457098455 0.05190787253981482 160.72090483710008 172776.92056727703 0.006963776524329264 0.014489269001930377 1.827250956508561e-07 6.738201802104391 0.09635543112806833 RS(ph)TQGVTLTDLK ddPTM_A549_MK2206_60min_R1 4 RSTQGVTLTDLK 12 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 RS(0.5)T(0.5)QGVTLTDLK;RS(0.5)T(0.5)QGVTLTDLK;RS(0.5)T(0.5)QGVTLTDLK;RS(0.5)T(0.5)QGVTLTDLK 112.67 1.9433e-05 182637000.0 5215.03 5397.37 4886.7 4998.3 6727.4 6059.7 4487.57 5138.26 7337.9 6759.599999999999 6872.0 True False 6095.199568757824 5672.073078968781 5579.707540757201 6222.88372438221 5737.808371732893 6700.933431896689 5302.903380953045 5866.6240902612935 5675.877366218434 5232.601665253914 5165.492742448531 1.1799841511089986 1.098070089685214 1.0801888259187302 1.2047028298470626 1.1107959410302208 1.2972496073473008 1.0266016516440557 1.1357336817165702 1.0988065706831236 1.0129917756449256 1.0 12.334690260699208 -9.845620138774525 0.5079261941920132 0.996039482759091 1.147548076974042 0.3789453397181832 0.06682847197968732 0.706516867942555 0.3718762581378544 0.04666283678489994 0.01772549249814264 1.4268550650037285e-10 9.845620138774525 0.151508594214951 RS(ph)TQGVTLTDLK ddPTM_A549_PD325901_60min_R1 2 RSTQGVTLTDLK 12 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 RS(0.5)T(0.5)QGVTLTDLK;RS(0.499)T(0.499)QGVT(0.001)LTDLK 127.62 3.8785e-08 127708500.0 6260.5 6481.4 6680.09 6279.8 7662.7 6402.4 6368.4 6957.0 7296.200000000001 7974.900000000001 7237.700000000001 True False 6896.0613512634845 7027.610324475275 7133.441078044418 6667.688983539414 7124.498386879909 6350.260977108954 6610.7529469221945 6818.237177339083 6989.566087218968 7471.3634529950505 6347.508783560477 1.0864201352700311 1.1071446395909217 1.1238174410281148 1.050441867966875 1.1224085904901417 1.0004335864104048 1.0414720439684144 1.0741595498060206 1.1011510697427258 1.1770544488800494 1.0 12.631974770909878 -14.999999994840598 0.3061126937395742 0.2649327877926024 1.0851371795179412 0.0 0.06467413042525111 34.889107080967214 0.46145217921409054 15.893980564987107 0.012989883501259843 1.0000000118799617e-15 14.999999994840598 0.8202043917253388 RS(ph)TQGVTLTDLKEAEK ddPTM_A549_MK2206_60min_R1 1 RSTQGVTLTDLKEAEK 16 2 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 RS(0.5)T(0.5)QGVTLTDLKEAEK 154.65 7.5722e-21 36575000.0 2540.8 2595.9 3604.5 3038.8 3443.0 2605.2 2202.6 2108.2 5005.6 4657.2 5308.3 True False 2969.62492340406 2728.020222014622 4115.672300460296 3783.3061364169143 2936.5392609145224 2880.8805348082005 2602.7839090837974 2407.0438060917218 3871.839592300659 3605.1352854341253 3990.102608373045 0.7442477587349359 0.6836967591484987 1.0314702914716403 0.9481726430989074 0.7359558259861115 0.722006629293895 0.6523100192015053 0.6032536108321255 0.9703609085580365 0.9035194428005225 1.0 11.962210131532652 -8.884940583227271 9.480781602457174 0.9869246351880899 0.7713421836237168 0.3284144061807275 0.12083587285079794 0.22005356987624483 17.454076844401705 0.022085446157462225 0.023483761210282457 1.3033450797304693e-09 8.884940583227271 -0.21558245156437317 RS(ph)TQGVTLTDLQEAEK ddPTM_A549_MK2206_60min_R1 7 RSTQGVTLTDLQEAEK 16 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RS(0.697)T(0.303)QGVTLTDLQEAEK;RS(0.497)T(0.497)QGVT(0.004)LT(0.001)DLQEAEK;RS(0.701)T(0.299)QGVTLTDLQEAEK;RS(0.479)T(0.479)QGVT(0.039)LT(0.002)DLQEAEK;RS(0.483)T(0.483)QGVT(0.034)LTDLQEAEK;RS(0.495)T(0.495)QGVT(0.01)LTDLQEAEK;RS(0.433)T(0.433)QGVT(0.058)LT(0.076)DLQEAEK 239.9 1.0708999999999998e-65 1935456100.0 29196.0 30224.199999999997 31972.6 29262.8 41435.5 31691.1 30511.100000000002 30811.699999999997 50110.4 49057.6 48727.8 True False 34123.571026332225 31762.48268200407 36506.79544838308 36432.18731365701 35340.39283927494 35044.63116715034 36054.57192792458 35179.3528318738 38760.47440986553 37975.45408801708 36627.34244113558 0.93164201255313 0.8671795594520703 0.9967088250274715 0.9946718731288733 0.9648636915460377 0.9567888039780981 0.9843622148090185 0.9604669759595891 1.058238786288089 1.0368061551025187 1.0 15.160633407211153 -5.536987844642642 0.3400556175612753 1.0251501431339 0.8316995330054555 0.45250686628221326 0.036252630155108365 3.6116479254755367 0.32664016239539156 0.013237498967657885 0.27773150560967585 2.9041039355504645e-06 5.536987844642642 -0.19345061012844456 RS(ph)TQGVTLTDLQEAEK ddPTM_A549_PD325901_60min_R1 7 RSTQGVTLTDLQEAEK 16 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RS(0.5)T(0.5)QGVTLTDLQEAEK;RS(0.5)T(0.5)QGVTLTDLQEAEK;RS(0.5)T(0.5)QGVTLTDLQEAEK;RS(0.843)T(0.157)QGVTLTDLQEAEK;RS(0.774)T(0.225)QGVT(0.001)LTDLQEAEK;RS(0.5)T(0.5)QGVTLTDLQEAEK;RS(0.5)T(0.5)QGVTLTDLQEAEK 224.57 3.3443000000000004e-55 3060872900.0 31413.500000000004 32405.2 33149.4 31837.6 36254.9 34058.200000000004 34885.5 36446.899999999994 37002.200000000004 38078.4 37508.6 True False 34602.57539460358 35136.099930059296 35399.11762753582 33804.13624356421 33708.480896615074 33780.84131116023 36213.08679257809 35719.93798746007 35447.12621261667 35674.123325499604 32895.279986605754 1.0519009234362193 1.0681198015145625 1.0761154074976587 1.0276287740164705 1.0247208994828572 1.026920619764144 1.100859661547896 1.0858681854054582 1.0775748443864885 1.0844754426782606 1.0 15.005592971764361 -10.834117685111961 1.1063630775177626 1.000349524127935 1.0607087341567554 0.0 0.03445890307830522 0.3917224223373185 0.8589802762233654 0.017917095299731612 0.004514411560149936 1.4651507606275716e-11 10.834117685111961 0.06035921002882039 RS(ph)TQGVTLTDLQEAER ddPTM_A549_MK2206_60min_R1 2 RSTQGVTLTDLQEAER 16 1 O60237;O60237-6 O60237 PPP1R12B Protein phosphatase 1 regulatory subunit 12B 1 RS(0.5)T(0.5)QGVTLTDLQEAER;RS(0.5)T(0.5)QGVTLTDLQEAER 138.35 4.2026e-11 43955000.0 817.52 842.26 758.29 703.9 1113.4299999999998 970.5899999999999 830.13 695.11 1540.87 1607.6599999999999 1248.04 True False 955.4973895549781 885.1274364166708 865.8269243212757 876.3555315992714 949.6459219518016 1073.2971895745009 980.9538756232326 793.6439711850949 1191.8654052637678 1244.4884894316388 938.1172238482926 1.018526645993546 0.9435147483869339 0.9229410806141352 0.9341642060512803 1.0122891871190858 1.1440970939342532 1.0456623657320967 0.8459965887093006 1.2704866459807267 1.326581004798704 1.0 9.87362439790765 -7.279034167787563 0.8849024085596188 1.109149920204944 0.9476156134192856 0.2380331134796111 0.12365718789186445 0.7022713489145892 1.0827908429466597 0.02291588036788695 0.05513429046312771 5.259758840108239e-08 7.279034167787563 -0.1615343067856584 RS(ph)TQGVTLTDLQEAER ddPTM_A549_PD325901_60min_R1 2 RSTQGVTLTDLQEAER 16 1 O60237;O60237-6 O60237 PPP1R12B Protein phosphatase 1 regulatory subunit 12B 1 RS(0.5)T(0.5)QGVTLTDLQEAER;RS(0.5)T(0.5)QGVTLTDLQEAER 188.44 1.1410999999999999e-34 65796000.0 2670.6 2239.8 2480.1000000000004 3325.8 3173.5 2719.0 2986.0 2709.3 3480.2 3447.2 3594.6000000000004 True False 2941.71734600819 2428.5558065787827 2648.4145000528383 3531.227112560174 2950.6043079806586 2696.857365481577 3099.6338640018967 2655.260886095267 3333.9392967215053 3229.5432036971665 3152.4869880468214 0.9331417884236162 0.7703618812026999 0.8401032296389302 1.1201401071437913 0.9359608205103987 0.8554697848737076 0.9832344671856454 0.8422749708922289 1.0575584639564541 1.0244429924508862 1.0 11.622274700475197 -6.324813720226867 0.28297730455049985 1.030961678009979 0.7870754108394237 0.15979674334051208 0.09345288684288285 5.011134173161619 0.46943401252367206 0.05122612650858386 0.3996173572565602 4.733542489094522e-07 6.324813720226867 -0.2438862671705554 RS(ph)TSFER ddPTM_A549_MK2206_60min_R1 2 RSTSFER 7 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 RS(0.443)T(0.443)S(0.113)FER;RS(0.498)T(0.498)S(0.004)FER 81.09899999999999 0.0065117000000000005 34876000.0 2729.1000000000004 3001.2 2441.6 2437.8 3006.7 2861.8999999999996 2479.4 2182.3 3835.8 3607.9 4056.2000000000003 True False 3189.7053599110604 3153.948260838352 2787.855594064048 3035.0611094369992 2564.418412951407 3164.7443584245298 2929.8748861265626 2491.6477080134573 2966.997424513919 2792.872884204628 3048.9335945750495 1.0461708203768312 1.0344430808365765 0.9143707160511675 0.9954500533685832 0.8410870008826241 1.0379840230221944 0.9609507046462648 0.8172194082701021 0.9731262857915571 0.9160163045774337 1.0 11.57408901361895 -3.9027368825810207 14.16910635844448 0.9714823116569401 0.9693814750503907 0.0 0.07544078395465326 0.0 0.0 0.00922541825413808 0.0 0.00012510167294625132 3.9027368825810207 -0.002100836606549361 RS(ph)TSFER ddPTM_A549_PD325901_60min_R1 2 RSTSFER 7 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 RS(0.469)T(0.469)S(0.062)FER;RS(0.458)T(0.458)S(0.084)FER 79.16 0.0068789 43278000.0 2172.5699999999997 2035.88 2269.66 2013.0900000000001 2752.08 3091.71 2275.8900000000003 2185.66 2346.42 2840.88 3182.8 True False 2393.1277070384976 2207.4507525214826 2423.6927761743186 2137.4339972408948 2558.783394960583 3066.5321388131824 2362.5002393647956 2142.0652966829 2247.80812729535 2661.506351972385 2791.3357774315427 0.857341394176713 0.7908223619562803 0.8682913735317389 0.765738760102757 0.9166877792520741 1.098589486656049 0.8463690604570183 0.7673979296944092 0.8052804486902964 0.9534884242487585 1.0 11.446739965245856 -10.89232629789113 1.1619518020200181 0.9994254546490092 0.85491537684848 0.20588599807313324 0.08910128278930515 0.5602053013568196 1.3519216235599485 0.06414446590694883 0.015624443484393076 1.2813674927815081e-11 10.89232629789113 -0.14451007780052927 RS(ph)TSPIIGS(ph)PPVR ddPTM_A549_MK2206_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.655)T(0.104)S(0.24)PIIGS(1)PPVR 89.63600000000001 0.00030706 13571000.0 2668.2 2957.3 2310.9 2711.3 4023.1 3017.2 2799.9 3654.8 4414.3 3894.2 4548.0 True False 3118.526928773106 3107.8139383504144 2638.620368742876 3375.5686217148814 3431.307319368343 3336.4781013447327 3308.6055875073666 4172.879092355579 3414.4680981885913 3014.4975153606397 3418.606081585556 0.9122217811438303 0.9090880505627033 0.7718410093973387 0.9874108163258419 1.0037153265043326 0.9759761790973203 0.9678229981890248 1.220637591102684 0.9987895699889924 0.8817914212457348 1.0 11.739192478452994 -6.428314503220056 7.175518874668962 1.0118530362211748 0.8692020414644009 0.35774208766017523 0.08369548974772632 0.18998383997983803 12.571793974346857 0.010192643675335374 0.023772890207973574 3.7297995891669733e-07 6.428314503220056 -0.1426509947567739 RS(ph)TSPIIGSPPVR ddPTM_A549_PD325901_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 RS(0.466)T(0.316)S(0.218)PIIGSPPVR 73.02199999999999 0.0011270999999999998 17705000.0 4711.5 4661.4 4021.2 5463.0 5501.4 5640.5 4687.6 5418.0 5639.2 6105.8 6229.6 True False 5189.80801157702 5054.2325371847255 4294.102813439972 5800.437102626805 5115.000642799679 5594.565638101813 4865.989183153143 5309.933739661222 5402.204034846246 5720.278745977655 5463.3986926880525 0.9499229881434074 0.9251077619411274 0.7859764690405975 1.0616902461081283 0.9362305280127821 1.0240083055972664 0.89065240464064 0.9719103507433531 0.9887991594090129 1.0470183612324317 1.0 12.41558299251879 -6.548414400037424 0.3131003685638024 1.0006528023787957 0.8792275015944456 0.1925216291736278 0.06719980876715939 4.38966508749772 0.5512219133704691 0.027705419542940986 0.1860064421085171 2.828691594606802e-07 6.548414400037424 -0.1214253007843501 RS(ph)TSRDRLDDIIVLTK ddPTM_A549_MK2206_60min_R1 2 RSTSRDRLDDIIVLTK 16 3 G5E9N8;Q7Z3D4-2;Q7Z3D4-3;Q7Z3D4 G5E9N8 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 1 RS(0.333)T(0.333)S(0.333)RDRLDDIIVLTK;RS(0.333)T(0.333)S(0.333)RDRLDDIIVLTK 119.31 3.4514999999999995e-08 11881400.0 1953.17 2133.55 1670.77 1229.2399999999998 3131.3 2426.5 2102.24 1844.22 2953.3 2722.7 2132.7400000000002 True False 2282.8173455782076 2242.1385818711424 1907.710309180204 1530.40385518268 2670.6899180080277 2683.2706194196585 2484.18979616468 2105.6438326868774 2284.3822654510027 2107.6401790027253 1603.1217973704424 1.42398247551911 1.3986077574073672 1.1899971120780528 0.9546397894988143 1.665930762334271 1.6737783890288032 1.5495951712710974 1.3134646638456968 1.4249586458109504 1.314709950585059 1.0 10.646668323246951 -10.640027159474082 0.8132063350100823 0.9881762333473788 1.3995808766409112 0.09832196756558287 0.21513039950231153 0.6403188621547276 0.7206342318730072 0.1644878412910923 0.03949175983545365 2.290724393256575e-11 10.640027159474082 0.41140464329353243 RS(ph)TSRDRLDDIIVLTK ddPTM_A549_PD325901_60min_R1 2 RSTSRDRLDDIIVLTK 16 3 G5E9N8;Q7Z3D4-2;Q7Z3D4-3;Q7Z3D4 G5E9N8 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 1 RS(0.333)T(0.333)S(0.333)RDRLDDIIVLTK;RS(0.333)T(0.333)S(0.333)RDRLDDIIVLTK 100.41 3.8433999999999996e-07 20968800.0 3497.7 4041.0 4284.6 3669.5 3881.3 4310.9 3568.5 4184.6 4276.0 4426.700000000001 4161.7 True False 3852.7839291293494 4381.549251890736 4575.378721392842 3896.1566809608416 3608.6908777580998 4275.793459674337 3704.3012202581285 4101.134870244806 4096.294590190549 4147.197406534652 3649.8372831899146 1.0556042996421096 1.2004779698182362 1.2535843015428936 1.0674877751140859 0.988726509638848 1.1715024884444558 1.0149222918290246 1.12364868678761 1.1223225235428675 1.1362691223620935 1.0 11.833616431951256 -14.999999999999972 0.19169424956334988 0.4947787773620721 1.1371071888355229 0.0 0.08450469314396114 53.12668384612411 0.6114082431517031 10.118226608342686 0.07266992280775993 1.0000000000000654e-15 14.999999999999972 0.6423284114734508 RS(ph)TVLGLPQHVQK ddPTM_A549_MK2206_60min_R1 8 RSTVLGLPQHVQK 13 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK 105.39 2.2805e-05 138997500.0 13087.98 14243.3 14587.33 13557.82 19494.3 14408.550000000003 13400.699999999999 14224.73 21095.4 20372.800000000003 22160.1 True False 15296.911053610618 14968.22313194686 16656.032742037314 16879.486508633676 16626.714293943063 15933.253197378595 15835.433728529566 16241.1290389086 16317.32558243155 15770.570330475895 16657.135582353574 0.9183398296773206 0.8986072700161044 0.9999337917188218 1.0133486892257548 0.9981736782857948 0.9565422049069557 0.9506696784833455 0.9750253252494572 0.9795997338052518 0.9467756477400053 1.0 14.02385271083929 -5.7599862356493166 24.99858276414862 0.9867939164686973 0.9084735264126127 0.5963025108711009 0.02213234407637381 15.145935932133805 260529.38583343 0.0028449999742229813 0.009957257505249992 1.7378559067668872e-06 5.7599862356493166 -0.0783203900560846 RS(ph)TVLGLPQHVQK ddPTM_A549_PD325901_60min_R1 4 RSTVLGLPQHVQK 13 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK;RS(0.5)T(0.5)VLGLPQHVQK 115.73 3.9565e-06 212675000.0 7239.7 7297.700000000001 7675.1 9129.1 9034.699999999999 8617.3 8546.2 9365.5 9524.900000000001 9443.5 9589.099999999999 True False 7974.669014414551 7912.702790280383 8195.978440125613 9692.983773309606 8400.133840022949 8547.123565856711 8871.430317660082 9178.697755407384 9124.601576731988 8847.235798362206 8409.70149031319 0.9482701643572325 0.9409017429922715 0.9745861312159824 1.1525954618573062 0.9988623079783199 1.0163408981521893 1.0549043063988348 1.0914415649568503 1.0850089729394397 1.0520273292165 1.0 13.03783887633299 -6.017741960388287 24.617817670866085 1.047609067557689 0.9478754199945847 0.52920766019502 0.04272989328323999 391.05719363642595 542612.9801627501 0.0065159638264319746 0.01765615944412595 9.59970836612286e-07 6.017741960388287 -0.09973364756310432 RS(ph)VAVSDEEEVEEEAER ddPTM_A549_MK2206_60min_R1 2 RSVAVSDEEEVEEEAER 17 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 RS(0.5)VAVS(0.5)DEEEVEEEAER;RS(0.541)VAVS(0.459)DEEEVEEEAER 69.922 0.0005765 3034300.0 0.0 0.0 0.0 0.0 122.03 0.0 0.0 113.34 152.21 263.86 0.0 True False 0.0 0.0 0.0 0.0 104.0795486521635 0.0 0.0 129.4062920891926 117.73467802942375 204.2538427412713 0.0 0.0 RS(ph)VAVSDEEEVEEEAER ddPTM_A549_PD325901_60min_R1 2 RSVAVSDEEEVEEEAER 17 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 RS(0.5)VAVS(0.5)DEEEVEEEAER;RS(0.5)VAVS(0.5)DEEEVEEEAER 56.528999999999996 0.0038764000000000003 3766100.0 0.0 0.0 137.29 0.0 0.0 125.33 0.0 98.40899999999999 0.0 129.19 111.71 True False 0.0 0.0 146.60732499183663 0.0 0.0 124.30935403302904 0.0 96.44615529463294 0.0 121.03292135229665 97.97037818803499 0.0 0.0 1.496445432827181 0.0 0.0 1.2688463220427866 0.0 0.9844420025563585 0.0 1.2354032268814725 1.0 6.614273704307298 -11.088993989984722 1.4165778380622176 1.0000445413352013 0.38471390739153444 0.1837343382899338 0.5507848423500035 0.6446845964722691 2.3107932518796126 0.37370361161977944 0.08183186439916001 8.147155584424074e-12 11.088993989984722 -0.6153306339436668 RS(ph)VGSDE ddPTM_A549_MK2206_60min_R1 1 RSVGSDE 7 1 C9JBX5;P43307-2;P43307;E9PAL7 C9JBX5 SSR1 Translocon-associated protein subunit alpha 1 RS(1)VGSDE 111.06 0.0066048999999999995 53500000.0 3968.6 3554.4 2454.5 965.49 425.84 180.83 249.01 475.17 267.05 3738.3 3957.1 True False 4638.402657045559 3735.3037779301094 2802.5850080398927 1202.0350933424927 363.1995001068371 199.96531057476074 294.251893762352 542.5268026470942 206.56360139122012 2893.8154336378916 2974.4428595959102 1.559418982308406 1.25579947380047 0.9422218345860693 0.4041210909345873 0.12210673300887655 0.06722782047389098 0.09892672599611722 0.18239610853401925 0.06944614878877942 0.972893267827316 1.0 11.538403748386404 -5.923915452571718 1.9771196261155548 0.41657775595805663 1.4848917258507466 0.6137813457501325 0.3258326438047566 0.23333301282919602 1.7312496159818942 0.05912670242436129 0.280264366135428 1.191473938794848e-06 5.923915452571718 1.06831396989269 RS(ph)VGSDE ddPTM_A549_PD325901_60min_R1 1 RSVGSDE 7 1 C9JBX5;P43307-2;P43307;E9PAL7 C9JBX5 SSR1 Translocon-associated protein subunit alpha 1 RS(0.998)VGS(0.002)DE 56.729 0.029655 72852000.0 367.26 346.43 327.35 329.24 402.0 0.0 188.25 262.93 557.34 647.35 677.05 True False 404.54396483747763 375.62487189619094 349.5659395154616 349.5764070417081 373.76490682471217 0.0 195.41395676435263 257.6856548854052 533.9169380020585 606.476210522558 593.7771421735662 0.6813060593013295 0.6326024449529796 0.5887157229324271 0.5887333516444523 0.6294700153941889 0.0 0.32910319863278176 0.4339770539871699 0.8991874224858423 1.02138692692431 1.0 9.213777746710667 -8.80864515174855 5.292987157530084 0.9553102528749445 0.4803562874334648 0.582166100992505 0.1841776975228077 0.10683980600845408 6.625019128763503 0.034541692805432435 0.03693980382991384 1.5536559344924432e-09 8.80864515174855 -0.4749539654414797 RS(ph)VQEGENPDDGVR ddPTM_A549_MK2206_60min_R1 1 RSVQEGENPDDGVR 14 1 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 RS(1)VQEGENPDDGVR 49.31 0.011705 1412700.0 380.98 298.1 353.48 168.21 614.13 370.72 129.16 276.97 481.73 728.42 566.29 True False 445.2801099332806 313.27201671195314 403.60877923892485 209.4214575512339 523.7922905330915 409.9493443359804 152.62670012587995 316.2313456850512 372.6189241647349 563.8694160903385 425.66456419109113 1.0460821674913572 0.735959821572833 0.9481850574193794 0.4919870601613423 1.230528295275123 0.9630807420275281 0.35856097257220154 0.7429120774617436 0.8753815927168822 1.324680190755094 1.0 8.733573183127431 -9.655864109972399 1.294805872178882 0.9726954577745544 0.8140109246639555 0.14115903956108244 0.2554887701110157 0.7689363643958321 2.6255495534424687 0.059959105874776444 0.04320904086723411 2.208695722159764e-10 9.655864109972399 -0.15868453311059882 RS(ph)VQEGENPDDGVR ddPTM_A549_PD325901_60min_R1 2 RSVQEGENPDDGVR 14 1 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 RS(1)VQEGENPDDGVR;RS(1)VQEGENPDDGVR 48.70399999999999 0.0122 2421700.0 340.09 360.65 300.14 322.12 402.28 298.82 304.07 393.28 289.22 225.79 568.74 True False 374.61568643897454 391.0432412012852 320.5093052884396 342.016620812401 374.0252405906599 296.38650899345544 315.6415502434886 385.43572187780836 277.06508918964255 211.53358086643757 498.7885855399067 0.7510510410607674 0.7839859462261068 0.6425754609871611 0.6856945622406133 0.7498672813167958 0.5942126936859151 0.6328163061346459 0.7727436694658898 0.5554760017006751 0.42409467056561856 1.0 8.962284640160041 -10.929507151373995 1.145464052609841 1.002796530279424 0.6759713275252487 0.0 0.1836653415384951 0.2158520594033015 0.49605794794073654 0.05664972173920161 0.012866708163237688 1.1762316159342613e-11 10.929507151373995 -0.32682520275417526 RS(ph)VSDNDIR ddPTM_A549_MK2206_60min_R1 1 RSVSDNDIR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 RS(0.5)VS(0.5)DNDIR 44.309 0.047181 1007000.0 396.15 427.33 428.04 196.69 637.08 326.06 165.52 325.02 646.14 486.62 438.94 True False 463.010435062389 449.07927172599386 488.7425083892425 244.87905882974968 543.3663759347728 360.56345277888875 195.5928414744167 371.09258033200456 499.79032167355535 376.69220402773243 329.9390838722873 1.4033209695205764 1.3610975288390608 1.4813113458799103 0.742194758971136 1.6468687781927007 1.0928182516214282 0.5928150105130519 1.124730589588613 1.5147957489844215 1.1417022791199307 1.0 8.36605587634355 RS(ph)VSDNDIR ddPTM_A549_PD325901_60min_R1 1 RSVSDNDIR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 RS(0.974)VS(0.026)DNDIR 44.61600000000001 0.023226 1827200.0 185.63 124.32 103.58 92.45700000000001 126.86 0.0 88.39399999999999 224.38 0.0 138.5 162.63 True False 204.47502094641666 134.79688270107795 110.60956167713921 98.16785890491796 117.94979124324126 0.0 91.75788204105278 219.90456487729526 0.0 129.7550863634421 142.62754099650994 1.4336292942989188 0.9450971513585612 0.7755133468917185 0.6882812268867491 0.826977667981582 0.0 0.6433391573602049 1.5418099712079891 0.0 0.9097477629977312 1.0 7.156108779008462 -4.47050525296965 0.7704022611948241 0.5835136525682908 3.598518253582583 0.171480376545615 0.4200980141723228 8.610098590695257 1.521115374229733 0.07417870312805751 29.87450834405391 3.384501781480145e-05 4.47050525296965 3.015004601014292 RS(ph)VSGSPESDELQELR ddPTM_A549_MK2206_60min_R1 1 RSVSGSPESDELQELR 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 RS(0.333)VS(0.333)GS(0.333)PESDELQELR 83.84899999999999 5.878e-05 3747500.0 221.58 178.4 259.04 179.26 202.96 249.48 239.45 147.77 191.01 475.17 233.97 True False 258.97728688911843 187.4797979919906 295.77576715528784 223.17870804728722 173.10485285948621 275.8798080085788 282.9549655089962 168.7168500266455 147.74653998029186 367.82876698010256 175.8687917565023 1.4725596525828375 1.0660208449692667 1.681797914235982 1.2690068875681335 0.9842840854854858 1.5686683535675046 1.608898103426782 0.9593336506242734 0.8400952693463267 2.0914953887292116 1.0 7.458355686383991 -8.355323700205771 7.4554162275618046 0.9237216280558851 1.3658455728878671 0.0 0.4082582246575068 0.16816225846041855 11.814105681536494 0.0335857039042309 0.0406203862736537 4.412414466516866e-09 8.355323700205771 0.44212394483198203 RS(ph)VSGSPESDELQELR ddPTM_A549_PD325901_60min_R1 2 RSVSGSPESDELQELR 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 RS(0.333)VS(0.333)GS(0.333)PESDELQELR;RS(0.406)VS(0.406)GS(0.189)PESDELQELR 136.58 7.569400000000001e-11 10654100.0 563.77 922.83 881.1500000000001 408.28 446.4 626.29 543.71 469.47 585.4 722.9200000000001 1004.26 True False 621.0035153744619 1000.6001227721666 940.9501377853954 433.4985283288437 415.0464039963969 621.1897018857874 564.4011815795285 460.10605255790966 560.7976737833367 677.2747078257008 880.7423865286547 0.7050909833260963 1.1360871670045511 1.0683602290268357 0.49219673647981055 0.4712460877831199 0.7053023805679837 0.6408243661396281 0.5224070733910797 0.6367329225446461 0.7689816207155665 1.0 9.78257628834557 -3.629409598217806 18.24666146347986 0.7753246980791422 0.8180068623728849 0.0 0.22366067952851254 0.0 0.0 0.032963254957342744 0.0 0.00023474178451586564 3.629409598217806 0.04268216429374272 RS(ph)WDQQIK ddPTM_A549_MK2206_60min_R1 1 RSWDQQIK 8 1 F8W8D3;Q14493;E7EUV9;H0YAE8;Q14493-2 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 RS(1)WDQQIK 61.998999999999995 0.0044205 2898700.0 917.52 808.84 648.13 833.62 1229.1 950.76 1220.8 1134.6 1286.6 1407.5 1315.3 True False 1072.374944789709 850.0065011650322 740.0445798577699 1037.856937422624 1048.3010181789243 1051.3687921365897 1442.6035577088446 1295.4330245667727 995.1871542780137 1089.5447724487956 988.6747095667279 1.084659023249074 0.8597433442365842 0.7485218067144487 1.049745611352241 1.0603093292821526 1.0634122446576353 1.4591286130309173 1.3102722382111678 1.0065870449079657 1.1020255316597232 1.0 9.949352118151042 -6.428015896911904 9.489211124974645 1.069281047897287 0.8939805021350309 0.24142437284666896 0.15916502197458038 0.5866940195346372 55.126328022188616 0.025017569107843966 0.05818553901084885 3.732364955998376e-07 6.428015896911904 -0.17530054576225607 RS(ph)WDQQIK ddPTM_A549_PD325901_60min_R1 1 RSWDQQIK 8 1 F8W8D3;Q14493;E7EUV9;H0YAE8;Q14493-2 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 RS(1)WDQQIK 49.35 0.014039 4967600.0 1588.6 1594.8 1249.4 1571.6 1429.1 1756.7 1360.4 1445.8 2186.8 1540.8 2074.9 True False 1749.8735025344904 1729.1993929510868 1334.1917972525362 1668.6741626374328 1328.7249461273532 1742.3940176320286 1412.1707664394444 1416.9623847918422 2094.8964008018474 1443.5136250454268 1819.700453874798 0.961627227606818 0.950265956833169 0.7331930892315606 0.9170048614782856 0.7301888304187751 0.957516944023311 0.7760457296322721 0.7786789203545114 1.1512314547930447 0.7932699153707776 1.0 10.829485268450659 -8.759994061772163 24.99986875719513 1.0714148572384476 0.849259330200338 0.0733529484248413 0.12283191951539116 21.364221029014583 369539.263096123 0.016133504946189568 0.01781680379443474 1.7378245903402701e-09 8.759994061772163 -0.2221555270381097 RS(ph)WGQQAQEYQEQK ddPTM_A549_MK2206_60min_R1 2 RSWGQQAQEYQEQK 14 1 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(1)WGQQAQEYQEQK;RS(1)WGQQAQEYQEQK 153.11 1.9056e-14 31330000.0 10086.900000000001 10214.3 8464.4 8479.2 12668.8 10170.099999999999 9627.0 9524.0 13407.0 13306.2 12968.3 True False 11789.322118972146 10734.164241197253 9664.779198228918 10556.604380645755 10805.236302257877 11246.293231633992 11376.101286093584 10874.05616602674 10370.335906579623 10300.32017844275 9747.913203127953 1.2094200956969063 1.1011756072830878 0.9914716100598476 1.0829604409339946 1.1084666099397198 1.1537129021650738 1.1670293989120841 1.1155265685518645 1.0638518922441722 1.05666925461929 1.0 13.25087768980886 -9.41066379461094 1.0684877533054356 1.0142519024097039 1.112161034389035 0.26589085414726765 0.05461409943476372 0.3555002026048474 0.8499525082916844 0.014992007984771431 0.01157466884102909 3.8845096564213617e-10 9.41066379461094 0.09790913197933104 RS(ph)WGQQAQEYQEQK ddPTM_A549_PD325901_60min_R1 2 RSWGQQAQEYQEQK 14 1 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(1)WGQQAQEYQEQK;RS(1)WGQQAQEYQEQK 156.92 2.2988e-19 39157000.0 16627.2 16850.7 18854.1 18993.9 19997.5 19621.7 16623.8 18775.7 21882.6 19902.3 24264.1 True False 18315.181103702304 18270.767626536803 20133.652604913586 20167.11006472329 18592.94458762981 19461.90738075391 17256.427805892406 18401.203934248286 20962.950420791338 18645.66538145224 21279.76952280278 0.8606851255638032 0.8585980034679596 0.9461405389442283 0.947712805024171 0.873738062233529 0.914573222228704 0.8109311422476132 0.8647275955940261 0.9851117230535815 0.8762155699793688 1.0 14.377194904913452 -8.789695636097031 9.09492765044576 0.9930568074987273 0.8861044147400563 0.16331133890838812 0.05190518078156186 0.13493938149529364 40.10853723973323 0.006927583338618627 0.00741001736684152 1.6229470988235436e-09 8.789695636097031 -0.10695239275867097 RS(ph)YDVPPPPMEPDHPFYSNISK ddPTM_A549_MK2206_60min_R1 1 RSYDVPPPPMEPDHPFYSNISK 22 1 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 RS(0.941)Y(0.059)DVPPPPMEPDHPFYSNISK 94.60600000000001 4.3056000000000006e-07 19086000.0 1811.8 1846.3 1721.4 1594.2 2299.5 2072.3 1672.6 1930.7 3113.9 2739.1 3110.3 True False 2117.587545742867 1940.268783815091 1965.5204044978086 1984.7790715663582 1961.2465961292303 2291.5894105185916 1976.489769514918 2204.382637520771 2408.6066218765022 2120.335407612432 2337.9266700869716 0.9057544758938448 0.8299100261099773 0.8407108869777727 0.8489483853197687 0.8388828534370889 0.9801801912090526 0.845402807027045 0.9428792894683763 1.030231894222286 0.906929817235694 1.0 11.191013964591122 -8.518573093073895 3.311152630042304 1.014143190723698 0.8697122883037214 0.42782515947671795 0.05231504079279349 0.0941123204715823 2.157378479224319 0.007040568310680532 0.008267015368171008 3.029890315176321e-09 8.518573093073895 -0.14443090241997658 RS(ph)YDVPPPPMEPDHPFYSNISK ddPTM_A549_PD325901_60min_R1 4 RSYDVPPPPMEPDHPFYSNISK 22 1 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 RS(0.854)Y(0.146)DVPPPPMEPDHPFYSNISK;RS(0.973)Y(0.027)DVPPPPMEPDHPFYSNISK;RS(0.998)Y(0.002)DVPPPPMEPDHPFYSNISK;RS(1)YDVPPPPMEPDHPFYSNISK 124.79 5.481499999999999e-16 85913900.0 9680.599999999999 9228.6 9006.7 10488.800000000001 11166.3 10358.0 10622.300000000001 11370.400000000001 10747.4 11165.3 13055.0 True False 10663.367385518935 10006.326509774513 9617.948823686906 11136.669354206855 10382.017609643737 10273.647882183957 11026.537439245601 11143.608452093762 10295.724153090252 10460.321052517978 11449.317762463492 0.9313539554713653 0.8739670535287426 0.840045583783104 0.9726928350891219 0.9067804584550102 0.8973152894634508 0.9630737540883028 0.9732989059512354 0.8992434629462999 0.9136195945938428 1.0 13.482974013676479 -14.999999999999856 0.21195197669635651 1.4193738074975986 0.9006283206694305 0.007804343700984262 0.04597551175993367 35.88712139684726 0.43420045069632107 6.301084476902126 0.02975403859946101 1.0000000000003314e-15 14.999999999999856 -0.518745486828168 RS(ph)YSLSELSVLQAK ddPTM_A549_MK2206_60min_R1 2 RSYSLSELSVLQAK 14 1 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 RS(0.489)YS(0.489)LS(0.022)ELSVLQAK;RS(0.496)YS(0.496)LS(0.008)ELSVLQAK 105.31 9.0329e-06 6992900.0 1796.68 1713.73 1771.7 1757.98 2474.2 1834.84 1751.46 1897.4 2924.6000000000004 2786.1 2454.5 True False 2099.915659391376 1800.9515370673444 2022.9537008532411 2188.68517891872 2110.248457552922 2029.001550931781 2069.677610734545 2166.3622605437986 2262.18276962652 2156.7180749695135 1844.9799092462056 1.1381780630062948 0.9761361237820472 1.0964638101017314 1.1862921476543018 1.1437785565996195 1.0997418133191272 1.1217886982737622 1.1741928731510678 1.226128673970639 1.1689656153766321 1.0 10.849389390926794 -5.990182626220436 24.76683441051756 1.1218958005170783 1.0519427995166257 0.15476164973293105 0.06672423389959779 358.93821143508313 905496.7457307846 0.012139656153536835 0.037677788571780495 1.0228627753377251e-06 5.990182626220436 -0.06995300100045254 RS(ph)YSLSELSVLQAK ddPTM_A549_PD325901_60min_R1 2 RSYSLSELSVLQAK 14 1 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 RS(0.496)YS(0.496)LS(0.007)ELSVLQAK;RS(0.604)YS(0.391)LS(0.005)ELSVLQAK 131.51 3.6266e-09 8390200.0 3441.1 4166.200000000001 3346.2 4057.7 3607.4 4143.2 4163.3 4474.8 3886.4 3821.3 4576.700000000001 True False 3790.437938796069 4517.300295280172 3573.2932543352326 4308.334913294675 3354.028668854394 4109.45915287358 4321.736659745174 4385.54660358731 3723.068123320055 3580.022465852862 4013.794914091664 0.9443526687147289 1.1254437239483255 0.8902530724203386 1.0733819254613477 0.8356253223300081 1.0238338631717474 1.0767208470398888 1.0926185062895208 0.9275681002656805 0.8919295934339071 1.0 11.970751188362685 RS(ph)YSPDGKESPSDK ddPTM_A549_PD325901_60min_R1 1 RSYSPDGKESPSDK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.499)Y(0.002)S(0.499)PDGKESPSDK 62.203 0.0020317 6232400.0 1853.4 1607.9 1644.3 2103.2 2298.5 2442.0 2381.6 2594.7 2128.8 2738.8 2653.1 True False 2041.5558035990332 1743.4033759255399 1755.8920859791474 2233.109887286234 2137.061289394531 2422.11316164252 2472.233091261527 2542.946672997227 2039.333939101414 2565.8717005934686 2326.785519386587 0.8774146936144122 0.7492754967742601 0.7546428630181844 0.9597403235838218 0.9184607999270713 1.0409696731656919 1.0625100898484552 1.092901194291267 0.8764597863059788 1.1027538547127937 1.0 11.184122515440428 -6.270487373580686 22.80500189277115 0.966336872701004 0.7893274663480714 0.5453271414629906 0.08065681423112146 120.79988481928375 304471.6053555395 0.011393038735787111 0.026890320085158334 5.364294670446776e-07 6.270487373580686 -0.1770094063529326 RS(ph)YSPDGKESPSDKK ddPTM_A549_MK2206_60min_R1 2 RSYSPDGKESPSDKK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.579)Y(0.028)S(0.392)PDGKES(0.001)PSDKK;RS(0.407)Y(0.185)S(0.407)PDGKESPSDKK 63.827 0.0012766 106958000.0 3687.7 3587.3 3822.3999999999996 2767.3 4963.700000000001 3860.0 2911.0 2806.5 4726.2 4949.4 4911.9 True False 4310.093604391197 3769.878247402848 4364.473796998038 3445.2886242288164 4233.546305373632 4268.462637939372 3439.8910194056707 3204.329969545783 3655.723246190543 3831.3271024924106 3692.139668456485 1.167370140738216 1.0210551566102757 1.182098779817456 0.9331414663598395 1.1466376371247853 1.1560945742130664 0.931679548526866 0.8678788608463902 0.990136770128968 1.0376983122347896 1.0 11.850241413804572 -7.765318730470127 24.999947218886945 0.9792958162186075 1.095551196614798 0.4135477144857319 0.07948039526046587 83.55581360545017 538465.3063748432 0.011668056925664408 0.01645395403383361 1.716648069803023e-08 7.765318730470127 0.11625538039619043 RS(ph)YSPDGKESPSDKK ddPTM_A549_PD325901_60min_R1 2 RSYSPDGKESPSDKK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.471)Y(0.058)S(0.471)PDGKESPSDKK;RS(0.734)YS(0.266)PDGKESPSDKK 127.97 9.828900000000001e-10 155676000.0 11717.5 11415.3 12764.7 12191.3 12861.2 15033.8 14146.8 15325.5 14357.5 15613.1 14973.9 True False 12907.051974032413 12377.307392998833 13630.989302376707 12944.328912548825 11957.87368073132 14911.369717240505 14685.164215425997 15019.820879877834 13754.104204551177 14627.28620145169 13132.205227372819 0.9828548785644093 0.9425155317554379 1.0379817453632403 0.9856934679613152 0.9105762112068034 1.135481014731569 1.1182557659711398 1.1437394268382635 1.0473567817750875 1.1138484320182964 1.0 13.680821580887287 -7.250007934079741 24.974775408105636 1.0480592905858186 0.9747253525799581 0.4247242683424475 0.05854566496233884 859.965205386921 1878803.1331855678 0.009507118512437414 0.016373018906620265 5.623310519302757e-08 7.250007934079741 -0.07333393800586052 RS(ph)YSSPDITQAIQEEEK ddPTM_A549_MK2206_60min_R1 2 RSYSSPDITQAIQEEEK 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.456)YS(0.456)S(0.089)PDITQAIQEEEK;RS(0.456)YS(0.456)S(0.087)PDITQAIQEEEK 174.63 2.0776e-30 16728700.0 3002.0 3936.6000000000004 2847.3 2835.1 4164.6 3272.2 3197.7 3769.7999999999997 5655.7 4833.6 6338.799999999999 True False 3508.664208146644 4136.956125421918 3251.089954529227 3529.6996272724737 3551.992856812261 3618.4620320894314 3778.680698300764 4304.180694528305 4374.6929802970335 3741.686402919005 4764.701018019901 0.7363870670745177 0.8682509374200231 0.6823282179162428 0.7408019126327752 0.7454807433622322 0.7594310783414444 0.7930572524928533 0.9033474877542311 0.9181463776535246 0.7852930097330562 1.0 12.218169973434687 -8.498734102464384 0.9182812868666994 0.9741888811356686 0.7509777795153728 0.38922708380998683 0.07223772413449658 0.15139870521215976 0.25211047452534935 0.010003507559426722 0.01186645035824457 3.171508630297462e-09 8.498734102464384 -0.22321110162029578 RS(ph)YSSPDITQAIQEEEK ddPTM_A549_PD325901_60min_R1 2 RSYSSPDITQAIQEEEK 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.588)YS(0.355)S(0.055)PDIT(0.002)QAIQEEEK;RS(0.392)YS(0.392)S(0.067)PDIT(0.15)QAIQEEEK 190.88 4.4427e-40 42503000.0 8225.6 7634.700000000001 7679.7 7511.6 8845.2 7577.5 6809.799999999999 7651.8 7960.200000000001 9002.7 9156.4 True False 9060.656856633324 8278.102962981979 8200.890623787667 7975.574471918642 8223.943666283447 7515.79135231212 7068.950665465547 7499.178846279022 7625.6604763411615 8434.267985589606 8030.220847201892 1.1283197596975785 1.03086865485978 1.0212534349718718 0.9931949100375874 1.0241242205871657 0.9359383129457736 0.8802934315223352 0.9338695646075649 0.9496202684137014 1.050315818963871 1.0 12.971223949961544 -4.651616519596366 0.6834062597381529 0.96493649134835 1.3922057591356904 0.5343951310739213 0.04418687661669714 3.265582171259207 0.59013262587731 0.006849822528283388 1.314502821980429 2.230403718166269e-05 4.651616519596366 0.4272692677873404 RSAS(ph)ADNLTLPR ddPTM_A549_MK2206_60min_R1 1 RSASADNLTLPR 12 1 Q8ND76;Q8ND76-3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 RS(0.463)AS(0.537)ADNLTLPR 71.98 0.00091566 5235100.0 572.45 543.29 489.17 303.82 313.24 430.36 391.61 414.51 389.44 638.09 645.33 True False 669.0655649412207 570.9411404207883 558.5416615941639 378.255913638998 267.16281094651896 475.900409550152 462.7604679180539 473.2680618836353 301.23246180788897 493.9450258272487 485.0767507980665 1.3792983560651977 1.1770119666247754 1.1514500760451416 0.7797856999262017 0.5507639987011801 0.9810827024119024 0.9539943259632687 0.9756560402142485 0.6209995867917603 1.0182822100102547 1.0 8.922069224157744 -6.105555366939382 3.1384256537557143 0.8280690576505824 1.2663278910279228 0.5312007424911855 0.15723211948860183 0.15740725894450575 2.9300933688308453 0.024898293798172343 0.07681166396147651 7.84232133036696e-07 6.105555366939382 0.4382588333773404 RSAS(ph)ADNLTLPR ddPTM_A549_PD325901_60min_R1 1 RSASADNLTLPR 12 1 Q8ND76;Q8ND76-3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 RS(0.269)AS(0.731)ADNLTLPR 93.10600000000001 0.00011097 8618500.0 1216.7 1110.3 1074.9 846.26 1013.4 982.3 1104.7 1056.6 1091.8 1252.8 1110.2 True False 1340.2184883128004 1203.868877598189 1147.849177898793 898.5315582040939 942.2222800402078 974.3004744805269 1146.7399630150358 1035.5252841133354 1045.9154428367738 1173.6979941958136 973.6524381376455 1.3764855258579791 1.2364462208926321 1.178910597804636 0.9228463084042196 0.9677193248161985 1.0006655725570008 1.1777713669658791 1.0635471586699226 1.0742184807109911 1.2054588970585904 1.0 9.927263059350494 -5.78462161629495 2.0499448783454004 1.0352734032457325 1.3484938376786866 0.5739613854451397 0.0853801664728816 0.1444237373770471 1.1283164822908496 0.01003222449521248 0.056949202440659916 1.6420197774215388e-06 5.78462161629495 0.3132204344329541 RSAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_A549_MK2206_60min_R1 2 RSASPDDDLGSSNWEAADLGNEER 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.243)AS(0.757)PDDDLGSSNWEAADLGNEER;RS(0.246)AS(0.754)PDDDLGSSNWEAADLGNEER 177.81 7.252400000000001e-42 288400000.0 5385.700000000001 5402.6 4852.9 4470.5 7155.700000000001 5561.700000000001 6049.2 6235.0 8113.9 8198.8 9029.0 True False 6294.67449227694 5677.569263629648 5541.114192510408 5565.772700688368 6103.106009098472 6150.235402442329 7148.261337886913 7118.830343886678 6276.114605235801 6346.685385686102 6786.850112277036 0.9274809945913235 0.8365543911687751 0.816448588202477 0.8200818654621815 0.8992545743802846 0.9061987963041787 1.0532516881367548 1.0489152148813643 0.9247463110880638 0.9351444750791387 1.0 12.728526436189183 -7.3295496345577416 2.370777299618563 0.9768640297368869 0.8501314433302982 0.6059460119384616 0.04977596879433294 0.1760448011857718 1.9350697432498591 0.00825723144090659 0.014390884664628576 4.6822043643540426e-08 7.3295496345577416 -0.1267325864065887 RSAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_A549_PD325901_60min_R1 2 RSASPDDDLGSSNWEAADLGNEER 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.032)AS(0.968)PDDDLGSSNWEAADLGNEER;RS(0.108)AS(0.892)PDDDLGSSNWEAADLGNEER 280.64 2.887399999999999e-140 509800000.0 18315.5 17420.7 16914.6 19152.0 19329.1 17518.0 17360.5 16812.5 21145.9 19561.3 22709.0 True False 20174.87607684154 18888.80352695198 18062.526471752648 20334.975542652155 17971.490697774978 17375.339216074393 18021.163327530106 16477.16149834891 20257.211359848065 18326.196179647653 19915.936964211673 1.0130016033438534 0.9484265571283228 0.9069383230229365 1.0210403647688524 0.9023673217117123 0.8724339330505687 0.9048614363418394 0.8273354915692825 1.0171357439145168 0.9201774544968316 1.0 14.281635733809615 -8.86953000069518 24.27078340542355 1.008094343370881 0.9246682209109912 0.09254233205057816 0.0594968138245873 5.945099423752784 1311.974635668136 0.009266343625483633 0.009864748313025433 1.3504235385179935e-09 8.86953000069518 -0.0834261224598899 RSAS(ph)PDDDLGSSNWEAADLGNEERK ddPTM_A549_PD325901_60min_R1 1 RSASPDDDLGSSNWEAADLGNEERK 25 2 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 RS(0.152)AS(0.848)PDDDLGSSNWEAADLGNEERK 188.54 6.9935e-58 11380000.0 2301.1 1979.6 1233.5 2019.2 2347.9 2663.8 1756.8 1972.4 2969.4 2575.2 2706.9 True False 2534.7059780197123 2146.427839406805 1317.212727638069 2143.921398064076 2182.9916038152783 2642.1068959800764 1823.655985357848 1933.0589346821343 2844.6064443666573 2412.6014325136193 2373.968460452887 1.0677083627034207 0.9041517927316214 0.5548568776633122 0.9030959904391803 0.9195537515265996 1.1129494515171596 0.7681888010466429 0.8142732167188778 1.198249467823168 1.016273582696782 1.0 11.213085052729324 -8.75457488402902 24.999914513083297 1.093617806517611 0.8765710377426547 0.2446852418278208 0.14787649297751426 150.04107879931348 546436.4768490922 0.026459109709340796 0.02967757123078437 1.7596452275601287e-09 8.75457488402902 -0.21704676877495632 RSAS(ph)PDYNR ddPTM_A549_MK2206_60min_R1 1 RSASPDYNR 9 1 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.002)AS(0.998)PDYNR 113.69 0.00018305 27130000.0 800.84 953.72 665.6 696.47 1203.2 922.84 629.9 847.26 1240.0 1132.5 1246.3 True False 936.0022133418247 1002.2602743325186 759.9920885521906 867.1051812657261 1026.2108738694028 1020.494316268386 744.344676442333 967.3616996249278 959.1419798731063 876.6674634445912 936.8093138698504 0.9991384580446883 1.0698658302107373 0.8112559058713364 0.9255941080301767 1.095431971774752 1.089329814680047 0.7945530274112367 1.0326132386844757 1.0238390734086558 0.9358013957218037 1.0 9.871611609131197 RSASAS(ph)HQADIK ddPTM_A549_MK2206_60min_R1 2 RSASASHQADIK 12 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 RS(0.195)AS(0.325)AS(0.481)HQADIK;RS(0.304)AS(0.304)AS(0.392)HQADIK 90.476 0.0001139 45454700.0 1936.86 2104.63 1462.17 1974.6599999999999 2658.41 1612.9 1472.42 1869.12 2601.32 2509.07 3605.61 True False 2263.7546163194224 2211.746677398448 1669.527692485512 2458.4517886458543 2267.3614105744327 1783.5760074436298 1739.9396546868084 2134.07348393993 2012.1251734544414 1942.2693443752053 2710.237527226405 0.8352605974857478 0.8160711580368009 0.616007887026075 0.9070982760547108 0.8365914012322007 0.6580884477933197 0.641987883795345 0.7874119749658592 0.7424165421816753 0.7166417426013871 1.0 11.404203580645232 -10.641633219523204 0.813960285238264 1.007307174775809 0.7575883264604903 0.0 0.11967454579383113 0.44198354411781643 0.4982088213061334 0.0689801442799294 0.01654282620186937 2.2822687329836365e-11 10.641633219523204 -0.24971884831531876 RSASAS(ph)HQADIK ddPTM_A549_PD325901_60min_R1 2 RSASASHQADIK 12 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 RS(0.066)AS(0.201)AS(0.732)HQADIK;RS(0.293)AS(0.293)AS(0.413)HQADIK 97.2 0.00010641 79493900.0 6432.68 5767.68 6227.53 7676.200000000001 8515.0 7887.58 6173.37 7478.3 6857.49 7538.66 9023.300000000001 True False 7085.72093811127 6253.742635274719 6650.167634980058 8150.341440084917 7916.935775155284 7823.346163598819 6408.300973547684 7329.139439887144 6569.2935428638475 7062.667721044239 7913.49130341148 0.8953975769274731 0.7902634116219666 0.8403582413887525 1.0299299168460996 1.0004352657520859 0.9886086764543736 0.8097944039927215 0.9261575149172877 0.8301384674589642 0.8924844231520854 1.0 12.950098613349851 -11.076113440647237 1.411912025581264 0.9997027701360769 0.8943245581662853 0.0 0.08260185712421665 0.596277608802666 2.1320021854630657 0.058669688426216955 0.013086913426278908 8.392407425454637e-12 11.076113440647237 -0.10537821196979158 RSDLDLGYEPEGS(ph)ASPTPPYLK ddPTM_A549_MK2206_60min_R1 1 RSDLDLGYEPEGSASPTPPYLK 22 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 RSDLDLGYEPEGS(0.492)AS(0.492)PT(0.016)PPYLK 82.34200000000001 3.138e-05 17357000.0 2613.0 2495.3 2151.7 1869.5 3539.6 2693.7 2535.7 2716.2 4256.0 3695.8 4347.0 True False 3054.010518283536 2622.3001117119634 2456.8434148704177 2327.5275839250426 3018.9295288797666 2978.745546066652 2996.403867367559 3101.2296680136315 3292.0227954354323 2860.916213155424 3267.5199289033444 0.9346570440990494 0.8025353077470191 0.7518985249754824 0.7123223835106691 0.9239207700541828 0.9116227630986135 0.9170269600691378 0.9491081111950482 1.0074989187718013 0.8755619783214648 1.0 11.673980319838831 -7.628511807703405 0.9177427820342465 1.0025908053039692 0.8044179892370179 0.38905838452701946 0.07157575153936852 0.24328150412587635 0.41218238972785015 0.011196955164943612 0.021180874455748996 2.352275538283321e-08 7.628511807703405 -0.19817281606695125 RSDLDLGYEPEGSAS(ph)PTPPYLK ddPTM_A549_MK2206_60min_R1 1 RSDLDLGYEPEGSASPTPPYLK 22 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 RSDLDLGYEPEGS(0.005)AS(0.995)PTPPYLK 114.21 3.0305e-15 15358000.0 1131.4 1378.7 1244.1 1274.4 1768.1 1197.4 1239.3 1234.6 1880.4 1930.4 1984.5 True False 1322.3526599257525 1448.8699410961747 1420.5320873914984 1586.6280572099897 1508.0148321879074 1324.1080732302082 1464.4647682409648 1409.6083308039279 1454.4924023817648 1494.321299278974 1491.6938805863097 0.8864772304395339 0.9712917375022662 0.9522946402603454 1.0636418623547388 1.010941220456829 0.8876540223586411 0.9817461794945204 0.9449715850881428 0.9750609165267053 1.001761365871952 1.0 10.542735786560579 -9.504215708668701 0.005182139314871526 1.962459135976676 8.291614746100012e-08 0.09346680021852205 0.04735671825655618 12402.827063257071 29.73681529175041 5689.767268141443 5570.2453335769205 3.13172984668331e-10 9.504215708668701 -1.9624590530605286 RSDLDLGYEPEGSAS(ph)PTPPYLK ddPTM_A549_PD325901_60min_R1 2 RSDLDLGYEPEGSASPTPPYLK 22 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 RSDLDLGYEPEGS(0.002)AS(0.989)PT(0.009)PPYLK;RSDLDLGYEPEGS(0.003)AS(0.981)PT(0.016)PPYLK 131.5 3.6731e-22 48835000.0 4003.1 4537.4 4446.7 3946.2 4752.0 4106.2 4675.0 4777.5 4651.0 4762.700000000001 5113.6 True False 4409.491765073535 4919.782622006682 4748.479802179333 4189.947811529544 4418.235913510033 4072.7604686062714 4852.909683258158 4682.209014623756 4455.534644288181 4461.982309192536 4484.659617781182 0.9832388945618941 1.0970247557920083 1.0588272481934045 0.9342844649606991 0.985188685444981 0.9081537542912341 1.0821132698715652 1.0440500313690058 0.9935056445805779 0.9949433601384747 1.0 12.13078277451689 -6.187592208030432 24.999876392445024 0.9957849419248881 1.0514299114808323 0.17839819638945775 0.05059934032384033 171.3734786648941 58015.07836181398 0.006711729780626442 0.01775756696345161 6.492437715581449e-07 6.187592208030432 0.055644969555944224 RSDS(ph)ASSEPVGIYQGFEK ddPTM_A549_MK2206_60min_R1 1 RSDSASSEPVGIYQGFEK 18 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 RS(0.235)DS(0.697)AS(0.067)S(0.001)EPVGIYQGFEK 142.14 5.0063999999999995e-17 10783000.0 2946.0 3863.0 3341.9 3242.2 4564.8 3108.8 3023.3 3607.1 5338.9 5389.2 5018.9 True False 3443.2127772151903 4059.610199792936 3815.831671773689 4036.5391455478884 3893.3239669539967 3437.7711525455766 3572.594475770926 4118.417471280452 4129.647674471392 4171.775977038047 3772.5686154067134 0.912697190755796 1.0760865112470002 1.0114677984093634 1.0699710348708176 1.0320087886683182 0.9112547717505085 0.9469925772008182 1.0916746363369865 1.0946514418866793 1.1058184495309162 1.0 11.881331425362823 -8.268547892458484 24.993551733956576 1.049468745521727 0.9993163430111017 0.25260149433071466 0.059956768137020264 938.164847809047 3298587.0808696635 0.01043860999141023 0.012770665791071967 5.3883042178485726e-09 8.268547892458484 -0.05015240251062536 RSDS(ph)FPER ddPTM_A549_PD325901_60min_R1 1 RSDSFPER 8 1 E9PD43;A0A0A0MSN9;A0A0A0MT02;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 RS(0.043)DS(0.957)FPER 50.193999999999996 0.013303 4585000.0 225.65 115.1 253.44 175.16 193.48 189.95 228.18 182.68 148.11 248.92 169.49 True False 248.5578218852498 124.79988094348516 270.63996245852644 185.97923538277718 179.89063226976452 188.4031101777218 236.86351476488704 179.0363040903124 141.8854517663991 233.20314871904705 148.64380448563287 1.672170749028925 0.83959019600812 1.8207281722574928 1.251173811288939 1.210212782781349 1.2674804094908096 1.5934973918659423 1.2044652968204748 0.9545332363994558 1.5688723087115766 1.0 7.215715522350085 -8.595471166321492 4.223367273558491 0.9793449849758531 1.3623742623349244 0.0 0.30567804176814906 0.16956551926317665 5.9433927142540774 0.03825270825638205 0.043643502798033175 2.53821749770162e-09 8.595471166321492 0.38302927735907133 RSDS(ph)IKFQHR ddPTM_A549_MK2206_60min_R1 5 RSDSIKFQHR 10 2 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 RS(0.121)DS(0.879)IKFQHR;RS(0.147)DS(0.853)IKFQHR;RS(0.154)DS(0.846)IKFQHR;RS(0.203)DS(0.797)IKFQHR;RS(0.161)DS(0.839)IKFQHR 88.09200000000001 0.00014605 80972200.0 6536.960000000001 7303.16 7256.04 5856.33 8834.410000000002 7149.749999999999 6097.63 5989.0199999999995 10793.56 10680.929999999998 11325.65 True False 7640.239034672313 7674.859649681534 8285.055580255772 7291.1311129006435 7534.879991872166 7906.331799380052 7205.490441998837 6837.981925604522 8348.835893773516 8268.100494771945 8513.178532961621 0.89746021478236 0.9015269232244743 0.9732035511974059 0.856452273926899 0.8850842212104862 0.9287167852486637 0.8463924977140287 0.803223132127323 0.9806955018561165 0.9712119231094738 1.0 13.055482170694413 -8.911089236170369 10.369273090792307 0.9915006032700211 0.8889332922367683 0.5123677636451673 0.0422404879509327 0.19813124413504 21.64106488946294 0.007367882694990536 0.007835790091675999 1.2271870503716281e-09 8.911089236170369 -0.10256731103325278 RSDS(ph)IKFQHR ddPTM_A549_PD325901_60min_R1 3 RSDSIKFQHR 10 2 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 RS(0.314)DS(0.686)IKFQHR;RS(0.069)DS(0.931)IKFQHR;RS(0.011)DS(0.989)IKFQHR 84.289 0.00023436 82657500.0 3088.57 3254.59 3217.7999999999997 4096.41 3979.41 3689.6200000000003 3153.72 3690.5 4348.78 4015.3999999999996 4276.26 True False 3402.119352714939 3528.865721284597 3436.179258203306 4349.435942077883 3699.9099698192263 3659.572958009614 3273.7365403818017 3616.8900823587587 4166.01589988982 3761.866958727549 3750.3071294455845 0.9071575301135086 0.9409537937780249 0.9162394277588896 1.1597545992775447 0.986561858032729 0.9758062024511086 0.8729249171829201 0.9644250344087021 1.1108465936510352 1.0030823686922072 1.0 11.87279303386636 -8.734024274361786 24.751901588597747 1.0523442248905381 0.9674569990681229 0.14873574638519027 0.0750208733426921 238.57094097075142 215395.1936434387 0.013593514812405887 0.015411620027082368 1.8449122971688779e-09 8.734024274361786 -0.08488722582241526 RSDS(ph)LLSFR ddPTM_A549_MK2206_60min_R1 2 RSDSLLSFR 9 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 RS(0.012)DS(0.988)LLSFR;RS(0.026)DS(0.974)LLSFR 140.24 1.7304000000000002e-05 24732000.0 1161.1299999999999 1153.2 888.3 788.6700000000001 1391.28 1351.7199999999998 1062.19 725.08 1179.2 1126.61 1396.35 True False 1357.100357097038 1211.8929542845492 1014.2742972669942 981.8941854047415 1186.6245550174713 1494.7581132008816 1255.176173789939 827.8623104643705 912.1130827954563 872.1080185353732 1049.5977577005258 1.2929718524458298 1.15462608927403 0.9663457165620106 0.935495696518912 1.1305517245169672 1.4241247203839493 1.1958640008338026 0.7887424533738177 0.8690120344709263 0.8308973720046814 1.0 10.035620827644415 -8.246460769223969 24.856831484825815 0.9252110980069951 1.1504262896741266 0.47689513181413967 0.13949865298346067 657.5423333181967 1091184.8809026694 0.024129301822213536 0.031084085953277125 5.6694278239901064e-09 8.246460769223969 0.22521519166713155 RSDS(ph)LLSFR ddPTM_A549_PD325901_60min_R1 4 RSDSLLSFR 9 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 RS(0.334)DS(0.665)LLSFR;RS(0.057)DS(0.94)LLS(0.003)FR;RS(0.001)DS(0.999)LLSFR;RS(0.001)DS(0.999)LLSFR 147.24 1.1955e-05 44867000.0 1655.88 1104.89 1191.96 1040.0810000000001 1133.07 1544.9599999999998 1510.09 1306.8899999999999 1272.1799999999998 1342.3899999999999 1837.7 True False 1823.9837186055724 1198.002957911792 1272.853573437757 1104.324441174665 1053.487072079295 1532.3783579898557 1567.5573013029552 1280.823053714628 1218.7146987251194 1257.6312663062895 1611.6745501401115 1.1317320351351356 0.7433280855664335 0.7897708463083325 0.6852031268215163 0.6536599290394639 0.9507988804914974 0.9726264531301801 0.7947156909583757 0.7561791545440548 0.7803258208656064 1.0 10.654344730573902 -7.295843423384447 24.85345261194331 0.8861039531755317 0.7905212200497016 0.06343793290493771 0.138018669864473 1141.5655869248899 824663.3408668113 0.022032026957221368 0.035221758283724126 5.0600706034281154e-08 7.295843423384447 -0.0955827331258301 RSDS(ph)PEIPFQAAAGPSDGLDAS(ph)SPGNSFVGLR ddPTM_A549_PD325901_60min_R1 1 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 32 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 RS(0.195)DS(0.805)PEIPFQAAAGPSDGLDAS(0.601)S(0.39)PGNS(0.008)FVGLR 115.36 1.4000999999999998e-21 5330200.0 417.2 528.23 271.64 443.35 556.62 339.36 479.32 448.91 232.68 654.38 528.71 True False 459.55383687359296 572.7457959233466 290.07512390401706 470.734722579095 517.5249314347549 336.5963646744493 497.5607848939681 439.9561378869179 222.90126876649617 613.062335122811 463.68202176882966 0.9910969485521808 1.2352124279877537 0.6255906209118348 1.0152102097540057 1.1161203306104648 0.7259206716499796 1.0730646467505889 0.9488315639424545 0.48072010192714437 1.3221611068381154 1.0 8.856991980304775 -8.56385389802204 24.994620474190697 0.7526786936945682 0.9673788440568486 0.0 0.25979703564505896 207.54669889624654 126601.4813527677 0.03945175242936656 0.044734104550942046 2.7298959987682133e-09 8.56385389802204 0.2147001503622804 RSDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A549_MK2206_60min_R1 2 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 32 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RS(0.222)DS(0.777)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.236)DS(0.764)PEIPFQAAAGPSDGLDASSPGNSFVGLR 131.17 4.3451999999999994e-30 144141000.0 1281.8899999999999 2117.3 1469.8200000000002 1510.4699999999998 2339.7 2089.88 1462.67 1831.13 2800.72 2559.27 2878.3999999999996 True False 1498.2416927985005 2225.0615262805027 1678.2625775177 1880.5352178075748 1995.5332293818483 2311.029714449931 1728.4182058928523 2090.698285100436 2166.361391830811 1981.1291295097906 2163.6138402013753 0.6924718565578476 1.0284004866937846 0.7756756526208476 0.8691639805893212 0.9223148753735634 1.0681340965330648 0.7988570667175905 0.9662991825315035 1.0012698900230643 0.9156574489860907 1.0 11.079227315924864 -2.087806026017503 0.19843757111831217 1.0179522078503724 8.427473832408264e-15 0.22505818833375935 0.09864228298143302 39.25854578433219 0.44816833400405 0.07164102696340029 12.462625048007718 0.00816947172477511 2.087806026017503 -1.017952207850364 RSDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A549_PD325901_60min_R1 2 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 32 1 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RS(0.049)DS(0.951)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.219)DS(0.781)PEIPFQAAAGPSDGLDASSPGNSFVGLR 207.06 1.7992999999999998e-89 239010000.0 3600.8999999999996 3087.9 3421.17 3952.8 3541.3999999999996 3264.1000000000004 3135.8 4617.1 3227.7200000000003 3913.1 3807.8 True False 3966.460717157527 3348.1281699859906 3653.3511693664664 4196.955478539861 3292.664281166757 3237.518251808905 3255.1345849756026 4525.0083184551195 3092.0701530986526 3666.0261981861745 3339.464739632973 1.1877534354782453 1.0025942571724742 1.0939930360719998 1.2567749042923364 0.9859856407792587 0.9694722071432105 0.9747474037810506 1.3550100603704667 0.9259178922902745 1.0977885631423354 1.0 11.705401165995976 RSDS(ph)PENK ddPTM_A549_MK2206_60min_R1 1 RSDSPENK 8 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;A0A494C0S5;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 RS(0.001)DS(0.999)PENK 93.561 0.0010695 10291000.0 6354.6 4968.2 3700.7 2602.1 1057.4 646.34 554.29 1011.5 1202.2 7963.4 7597.6 True False 7427.101124946255 5221.06015910206 4225.514907008853 3239.614616812706 901.8578607293106 714.7352697942318 654.9973181540265 1154.8832225888339 929.9036195189094 6164.462409178505 5710.906236907303 1.3005118306702135 0.9142262090314909 0.7399026934991578 0.5672680451092635 0.1579185199891681 0.12515268858297546 0.1146923607186966 0.20222416104913185 0.1628294321327348 1.0794192993994631 1.0 12.479503982921326 -5.6123371809015845 1.3886808357532103 0.46599516587403167 1.3656701344985374 0.41002239431626164 0.3275736413547009 0.6736534325403964 1.7601646798184307 0.05677528873189153 0.7036496317180002 2.4415342394563844e-06 5.6123371809015845 0.8996749686245057 RSDS(ph)PENK ddPTM_A549_PD325901_60min_R1 3 RSDSPENK 8 1 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;A0A494C0S5;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 RS(0.254)DS(0.746)PENK;RS(0.004)DS(0.996)PENK;RS(0.044)DS(0.956)PENK 106.62 0.0015109000000000001 73340600.0 12085.1 10761.9 9189.8 7853.0 8573.5 6842.0 5269.3 6453.200000000001 8565.9 10928.1 12487.3 True False 13311.970455419596 11668.843081891335 9813.475090756654 8338.061974542989 7971.326936969328 6786.28102045787 5469.826094971598 6324.485863562531 8205.905011719657 10238.09790099879 10951.441263516683 1.2155450716579845 1.0655075255495898 0.8960898254962096 0.7613666342091583 0.7278792576393373 0.6196701289962164 0.4994617569829479 0.5775026054909999 0.7492990935409181 0.9348630609110506 1.0 13.4188331276315 -3.4173567734671435 10.916464179306349 0.8341754387821998 1.1662793976205084 0.0 0.21066069639746815 0.0 0.0 0.03035683709990006 0.0 0.0003825103814471575 3.4173567734671435 0.33210395883830857 RSDS(ph)PENKYSDSTGHSK ddPTM_A549_PD325901_60min_R1 1 RSDSPENKYSDSTGHSK 17 2 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;A0A494C0S5;C9JVK6;C9JD58;J3QTA0;Q9BTA9-3 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 RS(0.157)DS(0.774)PENKY(0.014)S(0.049)DS(0.004)T(0.001)GHSK 46.578 0.0052413 3644000.0 580.3 828.3 923.52 1040.5 783.25 1025.8 782.09 892.59 909.65 984.63 1359.2 True False 639.2116288057189 898.1037479191026 986.1956207769026 1104.769321853047 728.2372220658106 1017.446224902906 811.8528629260694 874.7865922266915 871.4205738930855 922.4602937619928 1192.027016678696 0.536239212586584 0.7534256651509948 0.8273265680879496 0.9267988949874876 0.6109234202550818 0.8535429236644161 0.6810691801164936 0.7338647362742493 0.7310409593912516 0.7738585458677038 1.0 10.219201218773133 -10.659824621409934 0.7670042911144082 1.0132805715817896 0.7441597450243591 0.07430802956213767 0.12258377555457241 0.5272553928110506 0.5101655993796843 0.08689724710313025 0.019204659209460365 2.1886452732851364e-11 10.659824621409934 -0.2691208265574305 RSDS(ph)QQAVK ddPTM_A549_MK2206_60min_R1 8 RSDSQQAVK 9 1 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 RS(0.011)DS(0.989)QQAVK;RSDS(1)QQAVK;RSDS(1)QQAVK;RS(0.066)DS(0.934)QQAVK;RS(0.037)DS(0.963)QQAVK;RS(0.249)DS(0.751)QQAVK;RS(0.169)DS(0.831)QQAVK;RS(0.251)DS(0.749)QQAVK 139.76 3.3576e-05 200082300.0 23270.5 22008.129999999997 16955.89 11467.640000000001 14658.86 10580.050000000001 10284.56 11640.480000000001 14164.650000000001 32254.0 30421.399999999998 True False 27197.99149089823 23128.24981267638 19360.4901658071 14277.212314801915 12502.561112474417 11699.623868531207 12153.131426499067 13290.553687474901 10956.37939129806 24967.798998624137 22866.926792072718 1.1894030071555992 1.0114279904326389 0.8466590347645143 0.6243607829168981 0.5467530126002189 0.511639538400373 0.5314720048306708 0.5812129372838304 0.4791365053521888 1.0918738327040838 1.0 14.48097486686627 -5.744265608583581 1.920190943747823 0.6824008776512324 1.1756350679347802 0.4373191223219164 0.19073749127372264 0.3226472387153498 2.1274318301343245 0.031036694981636175 0.2013207626975391 1.8019153769229169e-06 5.744265608583581 0.49323419028354787 RSDS(ph)QQAVK ddPTM_A549_PD325901_60min_R1 6 RSDSQQAVK 9 1 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 RS(0.004)DS(0.996)QQAVK;RS(0.111)DS(0.889)QQAVK;RS(0.041)DS(0.959)QQAVK;RS(0.018)DS(0.982)QQAVK;RS(0.116)DS(0.884)QQAVK;RS(0.02)DS(0.98)QQAVK 140.78 2.171e-05 431273200.0 23250.03 23855.010000000002 20629.11 19120.99 22695.18 18605.11 14855.179999999998 17906.84 17862.769999999997 25456.75 29391.72 True False 25610.355929832553 25865.35541186487 22029.125457515824 20302.05012538096 21101.14885092058 18453.596152664562 15420.502003966409 17549.67402855578 17112.05989635596 23849.406460523864 25776.72476946406 0.9935457727419041 1.0034383981360504 0.8546130532305731 0.7876117042391446 0.8186124901297656 0.715901508733386 0.598233566982646 0.6808341317802209 0.6638570279738355 0.9252302871610997 1.0 14.653781343829609 -5.869241180945402 3.058240978317498 0.7961161182458597 1.0030357263787808 0.36401532796668545 0.11102788721066555 0.29373820294608444 5.389877401307242 0.020822398463916907 0.080686943488569 1.35132191214324e-06 5.869241180945402 0.2069196081329211 RSDS(ph)VSASER ddPTM_A549_MK2206_60min_R1 2 RSDSVSASER 10 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RS(0.003)DS(0.997)VSASER;RS(0.033)DS(0.966)VS(0.001)ASER 133.15 3.8133000000000004e-07 160396000.0 959.46 1054.72 859.73 772.3199999999999 1251.1799999999998 695.49 848.5799999999999 923.6800000000001 1405.3600000000001 1544.38 1592.3400000000001 True False 1121.3933914551549 1108.4007429266385 981.6526416631234 961.5384346707616 1067.133079428124 769.0862901711016 1002.756001802564 1054.614468651363 1087.0482038987648 1195.5034853815073 1196.9180316517031 0.9369007415718126 0.9260456552710514 0.8201502656856783 0.8033452661281021 0.8915673849073183 0.642555521625646 0.8377816820244552 0.8811083472408162 0.9082060551787978 0.9988181761551007 1.0 10.225108640470038 -9.319272554985599 0.9094019895469926 0.9805537289624756 0.8366370865065487 0.38348142318550527 0.07572969129220625 0.38162450748891363 0.6701608707518958 0.02201804700218068 0.017023403561822734 4.794324714704407e-10 9.319272554985599 -0.14391664245592695 RSDS(ph)VSASER ddPTM_A549_PD325901_60min_R1 2 RSDSVSASER 10 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RS(0.005)DS(0.995)VSASER;RSDS(1)VSASER 175.68 3.9562e-11 215659000.0 3161.5 3197.1 3144.9 3477.7 4020.4 3338.1000000000004 3429.0 3038.7 2918.22 3186.6000000000004 3228.5 True False 3482.4531526267087 3466.530837223424 3358.3318258199974 3692.5096305702455 3738.0209736270494 3310.9156203435264 3559.4924714207964 2978.0907446859665 2795.577361783412 2985.397532171444 2831.4149671477135 1.2299338645281064 1.2243104163271088 1.186096656543101 1.3041216753508844 1.3201953853456616 1.1693501866590923 1.2571426345911165 1.0518029957601058 0.9873428636282151 1.0543836091884644 1.0 11.467307488223625 -8.362183500751282 3.244609243150475 0.9944960325103 1.2423732353779573 0.8373458364566522 0.04612530918385947 0.05912237307189887 1.190058256840996 0.007126664913459316 0.00874030174582857 4.343266710442752e-09 8.362183500751282 0.24787720286765724 RSDSAS(ph)SEPVGIYQGFEK ddPTM_A549_PD325901_60min_R1 1 RSDSASSEPVGIYQGFEK 18 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 RS(0.15)DS(0.345)AS(0.484)S(0.022)EPVGIYQGFEK 96.79299999999999 8.5721e-07 21224000.0 2262.7 2378.5 2050.3 2707.7 3035.0 2512.7 2367.2 2061.7 2748.0 2701.6 2807.1 True False 2492.407638288298 2578.944542346477 2189.4456874554794 2874.948479367126 2821.8320701815974 2492.23740428303 2457.2850913815446 2020.5777761276374 2632.511116427416 2531.020514942061 2461.844495673019 1.012414733208778 1.0475659802555666 0.8893517406577416 1.1678026310842076 1.1462267723007276 1.0123455842411777 0.998147972262469 0.8207576797312097 1.069324695793891 1.0280992643485918 1.0 11.265523920405377 -7.453041211048358 24.999270756603746 1.0116470579417434 1.0526688930212766 0.08148230912270671 0.0907953760254024 499.78344016704506 178902.8310113388 0.014165298727541535 0.02264479084984324 3.5233743547136377e-08 7.453041211048358 0.041021835079533275 RSEACPCQPDSGS(ph)PLPAEEEK ddPTM_A549_MK2206_60min_R1 2 RSEACPCQPDSGSPLPAEEEK 21 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RSEACPCQPDS(0.257)GS(0.743)PLPAEEEK;RSEACPCQPDS(0.006)GS(0.994)PLPAEEEK 141.71 6.9545e-22 111762000.0 3422.6 3340.5 3609.7 3686.3 3852.5 3881.2 3198.8 3525.6 4903.9 5093.6 4555.9 True False 4000.2512054639237 3510.5171815708773 4121.609738652106 4589.4436654842975 3285.802353375891 4291.90600786795 3779.9805540621305 4025.364596697171 3793.1744799191315 3942.952222341162 3424.544293556648 1.1681119771148765 1.0251049134262884 1.203549840604194 1.3401618644908264 0.9594860138203489 1.253277995540388 1.1037908200440694 1.1754453298416898 1.1076435737905534 1.1513801207827592 1.0 11.741696305095152 -9.934522811949435 0.582345597159701 0.9986348849118614 1.1557399303763702 0.002737790537736373 0.10713744170817138 0.8242489690809646 0.560642538509254 0.05956522880000363 0.022662734452247587 1.1627254755522969e-10 9.934522811949435 0.15710504546450887 RSEACPCQPDSGS(ph)PLPAEEEK ddPTM_A549_PD325901_60min_R1 2 RSEACPCQPDSGSPLPAEEEK 21 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RSEACPCQPDS(0.001)GS(0.999)PLPAEEEK;RSEACPCQPDS(0.005)GS(0.995)PLPAEEEK 201.76 4.6733e-56 158425000.0 9042.8 9457.7 9859.8 8474.1 7896.1 7451.5 8867.3 8892.5 6518.700000000001 8031.3 10436.3 True False 9960.81839904249 10254.733570801032 10528.945319793955 8997.525910922539 7341.5051760661945 7390.817454536953 9204.74995387275 8715.132111468707 6244.7417083898845 7524.2023473697645 9152.701261156477 1.0882927471167025 1.1204051435964064 1.1503647960715353 0.9830459505007015 0.8021134926825492 0.8075012221695845 1.005686702890344 0.9521923487719645 0.6822840088632849 0.8220745037644825 1.0 13.15998187734159 -6.49829805005395 3.747742484923675 0.860805449515206 1.1173286453357598 0.5956518860788453 0.09096425858311397 0.15926615120755042 4.791009946986502 0.01786865789361033 0.04184392239487227 3.174694575650092e-07 6.49829805005395 0.25652319582055383 RSEACPCQPDSGS(ph)PLPAEEEKR ddPTM_A549_MK2206_60min_R1 1 RSEACPCQPDSGSPLPAEEEKR 22 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RSEACPCQPDS(0.262)GS(0.738)PLPAEEEKR 90.946 3.4689e-07 25732000.0 2213.6 3064.9 2338.1 2224.3 2780.7 2487.5 2445.8 1689.9 3396.7 3642.4 4007.5 True False 2587.2015626760167 3220.8903187536566 2669.6777377462104 2769.25359985262 2371.662713571016 2750.725598931135 2890.1702010520085 1929.4485001017001 2627.352873415304 2819.5793102433363 3012.3271486266744 0.8588713758582054 1.0692365602527822 0.8862509302694169 0.9193070550504874 0.7873191046504565 0.9131563283839195 0.9594476490940376 0.6405175815586097 0.872200376580319 0.9360136436471675 1.0 11.556662744602656 -4.199994534535733 16.570763205996666 0.9114288493344342 0.9060218703356213 0.0 0.10848318778046603 0.0 0.0 0.014523085364803958 0.0 6.309652849368716e-05 4.199994534535733 -0.005406978998812928 RSEACPCQPDSGS(ph)PLPAEEEKR ddPTM_A549_PD325901_60min_R1 1 RSEACPCQPDSGSPLPAEEEKR 22 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RSEACPCQPDS(0.106)GS(0.894)PLPAEEEKR 103.27 1.4473e-10 52449000.0 3443.2 3590.9 3280.3 3079.4 3479.9 3385.1 3157.6 3720.9 3522.2 3713.4 4053.0 True False 3792.75112925013 3893.5177452646476 3502.92088404634 3269.6075441751786 3235.483829003275 3357.5328679263266 3277.764195905018 3646.6837305104204 3374.174182780438 3478.9352902671917 3554.5066940838415 1.0670260195494428 1.095374993032102 0.9854872097657429 0.9198484700048949 0.910248343149402 0.9445847643259865 0.9221432052331097 1.025932441365211 0.9492665152091144 0.9787392709254334 1.0 11.795433636523116 -5.8301791712793305 5.062992376546818 0.9650180988746735 1.0812605573284775 0.6470077639555336 0.03465485573214743 0.09739671052023734 4.640153664451317 0.005287732672209441 0.017672291260308275 1.4784982973333443e-06 5.8301791712793305 0.11624245845380399 RSEDES(ph)ET(ph)EDEEEKSQEDQEQKR ddPTM_A549_PD325901_60min_R1 1 RSEDESETEDEEEKSQEDQEQKR 23 3 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 RS(0.167)EDES(0.835)ET(0.998)EDEEEKSQEDQEQKR 68.934 0.00013418 15394000.0 612.07 635.8 364.62 531.15 841.83 570.78 707.18 628.57 615.95 830.48 699.7 True False 674.2068958178812 689.3810973402936 389.3653058381785 563.9579291708276 782.70276495584 566.1317569215059 734.0921218837447 616.0326782463743 590.0637635238234 778.043351069397 613.6413357637459 1.0986986314713538 1.1234267595129996 0.6345160978335487 0.9190351045516161 1.2755052818951287 0.9225776099598816 1.196288579500734 1.0038969709881946 0.9615776010092645 1.2679122244935377 1.0 9.261251857903668 RSEDES(ph)ETEDEEEKSQEDQEQK ddPTM_A549_MK2206_60min_R1 3 RSEDESETEDEEEKSQEDQEQK 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 RS(0.012)EDES(0.982)ET(0.006)EDEEEKSQEDQEQK;RS(0.051)EDES(0.742)ET(0.206)EDEEEKS(0.001)QEDQEQK;RS(0.001)EDES(0.499)ET(0.499)EDEEEKSQEDQEQK 157.95 2.5116999999999998e-33 117164000.0 2571.35 2032.0800000000002 2363.87 2054.8199999999997 2601.17 2393.36 2184.64 2404.63 3119.7000000000003 2735.14 2868.07 True False 3005.3310165282714 2135.504192284555 2699.1023112467965 2558.2509922443733 2218.541338749063 2646.6237666162115 2581.5608095618036 2745.493666370524 2413.092931137199 2117.2699743627704 2155.8490642948736 1.3940359120230168 0.9905629423008919 1.251990390212966 1.1866558909963 1.0290800851935775 1.2276479881868996 1.1974682515198114 1.2735092228121772 1.1193236906529278 0.9821049207149752 1.0 11.074040460054999 -9.720064735436496 0.9210820336066868 1.017459694346978 1.183023810615129 0.32575776608594387 0.10692014044978629 0.4281114645054477 0.7565860899433884 0.032816010820325536 0.020033434911927387 1.9051767133451048e-10 9.720064735436496 0.16556411626815093 RSEDES(ph)ETEDEEEKSQEDQEQK ddPTM_A549_PD325901_60min_R1 3 RSEDESETEDEEEKSQEDQEQK 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 RS(0.002)EDES(0.993)ET(0.005)EDEEEKSQEDQEQK;RS(0.001)EDES(0.993)ET(0.006)EDEEEKSQEDQEQK;RS(0.001)EDES(0.775)ET(0.223)EDEEEKSQEDQEQK 200.0 3.6633999999999994e-61 262838000.0 4956.509999999999 4311.139999999999 3632.1099999999997 4774.9400000000005 5808.200000000001 5288.300000000001 5142.84 4883.7 4862.349999999999 5502.4 4936.299999999999 True False 5459.691246410186 4674.454897747148 3878.6068262517297 5069.877199124449 5400.252069202223 5245.233838130278 5338.553590470033 4786.290772311462 4658.0023387776 5154.977524954544 4329.166393783879 1.2611414646130474 1.0797586584934822 0.8959246361657305 1.1710977906518296 1.247411528685126 1.211603657845481 1.2331597136426777 1.1055917784042568 1.0759582596469117 1.1907552300037305 1.0 12.079873537019573 -9.14137271102213 1.2298341277927043 1.0219546168922424 1.148884916476798 0.0 0.11025015349449953 0.4587626883077167 1.4341204215839822 0.02388294405330938 0.021574385019482417 7.2214978947832e-10 9.14137271102213 0.1269302995845556 RSEDES(ph)ETEDEEEKSQEDQEQKR ddPTM_A549_MK2206_60min_R1 3 RSEDESETEDEEEKSQEDQEQKR 23 3 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 RS(0.011)EDES(0.495)ET(0.495)EDEEEKSQEDQEQKR;RS(0.056)EDES(0.943)ET(0.001)EDEEEKSQEDQEQKR;RS(0.141)EDES(0.843)ET(0.016)EDEEEKSQEDQEQKR 92.632 2.3109000000000001e-07 25712900.0 2323.1600000000003 2125.67 2094.38 2276.99 2707.6800000000003 2114.89 2072.77 1949.07 3034.8900000000003 2923.5699999999997 2919.06 True False 2715.2526121911915 2233.857523529342 2391.394576956037 2834.852652217965 2309.3838588420062 2338.6862560496374 2449.365478630537 2225.3566412765376 2347.492260723459 2263.133506492453 2194.176840042465 1.237481210556685 1.0180845421220055 1.0898823346024176 1.2919891416605696 1.052505803860965 1.0658604235401445 1.1163026762159851 1.0142102499055954 1.069873775842984 1.0314271234622336 1.0 11.099464089332567 -7.076047464722551 0.0897380005233856 0.8886234140581961 1.3204536489069116 0.2803107997891967 0.07591360376342673 26.825550520195872 0.7664948462170927 1.2976304788241495 2.382904007566673 8.39368245639083e-08 7.076047464722551 0.4318302348487155 RSEDES(ph)ETEDEEEKSQEDQEQKR ddPTM_A549_PD325901_60min_R1 4 RSEDESETEDEEEKSQEDQEQKR 23 3 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 RSEDES(0.848)ET(0.152)EDEEEKSQEDQEQKR;RS(0.139)EDES(0.861)ETEDEEEKSQEDQEQKR;RSEDES(0.972)ET(0.028)EDEEEKSQEDQEQKR;RS(0.001)EDES(0.996)ET(0.003)EDEEEKSQEDQEQKR 119.36 4.3194999999999995e-16 40962000.0 3034.97 3098.57 3250.12 3520.19 3568.35 3425.61 3290.6099999999997 3833.8900000000003 3302.6400000000003 3713.48 3465.7400000000002 True False 3343.0779201731702 3359.6973683323604 3470.6926877592555 3737.6241413684543 3317.721406139207 3397.712967917374 3415.8359642408846 3757.4200563214813 3163.8415260399706 3479.01023905354 3039.4759511359794 1.0998862876094553 1.1053541539214025 1.1418720672759763 1.2296936055610335 1.0915438909458177 1.1178614414262782 1.123823981224212 1.2362065424196484 1.0409167820056318 1.1446085756175461 1.0 11.56960688863693 -8.928977907769871 8.683709768403038 1.017953278249658 1.1416913660768355 0.18867939470863748 0.059939047105318125 0.13996177052456124 15.540993040757419 0.00808993169346371 0.00858561998810233 1.1776658789650825e-09 8.928977907769871 0.12373808782717743 RSEDESET(ph)EDEEEKSQEDQEQK ddPTM_A549_PD325901_60min_R1 1 RSEDESETEDEEEKSQEDQEQK 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 RS(0.017)EDES(0.388)ET(0.594)EDEEEKSQEDQEQK 74.274 0.00038667 21809000.0 577.33 694.77 811.38 583.84 996.92 654.1 646.48 748.96 677.23 880.94 889.51 True False 635.9401165921172 753.320706195527 866.4451260243023 619.9024708031552 926.8997783872935 648.7732264661641 671.0821501674297 734.0214052522466 648.768378230764 825.3172980578393 780.1059090684722 0.8151971536166108 0.9656646583988454 1.1106762760699098 0.7946388606944196 1.1881717182402944 0.8316476249242453 0.8602449261905628 0.9409253240098446 0.8316414100816915 1.0579554499764707 1.0 9.607526190820797 RSEEHS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 RSEEHSPPR 9 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.001)EEHS(0.999)PPR 51.841 0.01054 7716700.0 418.0 595.67 406.48 236.21 276.85 237.42 232.53 193.61 432.95 553.5 583.68 True False 488.5481808811782 625.9870586877191 464.12497619395214 294.0814606038699 236.12573174097736 262.54362681335897 274.7776910829273 221.0548104057578 334.88751627908135 428.4639655775549 438.7361472515073 1.1135352852545244 1.4267961794560535 1.0578681038740365 0.6702922985629596 0.5381952985187184 0.59840892631729 0.626293713896817 0.5038445356977556 0.7633004902308761 0.9765868808888823 1.0 8.777209763950761 -6.0350442045075265 4.536469796762299 0.7834803372430122 1.269037144035082 0.5954107941034137 0.1771862270877407 0.1307300221545105 6.309743508989356 0.029770472295002962 0.08760091265072949 9.224775283329178e-07 6.0350442045075265 0.4855568067920698 RSEEHS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 RSEEHSPPR 9 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.001)EEHS(0.999)PPR 67.456 0.0020523000000000004 11224000.0 296.01 401.57 638.1 238.8 409.76 382.71 305.31 468.38 569.46 421.05 308.37 True False 326.06071728895535 435.4117132100373 681.4053032070145 253.5501336458507 380.97987119525874 379.5933366470962 316.9287391220427 459.03779346299797 545.5275765504939 394.4648311431573 270.4424449184884 1.2056565950186937 1.6099976959654791 2.51959452375307 0.9375382393184286 1.4087280985426915 1.4036011867941292 1.1718897868179137 1.6973585400078468 2.0171670046649535 1.4585906855784025 1.0 8.079177784693107 -11.107207416435035 1.4703793773587717 1.0020891581541795 1.6111290945672079 0.028172993988969885 0.4345753082109208 0.5167166567162287 2.0089663464127283 0.30338966231780334 0.06694765726524127 7.8125459297429e-12 11.107207416435035 0.6090399364130283 RSELSQDAEPAGS(ph)QETK ddPTM_A549_MK2206_60min_R1 2 RSELSQDAEPAGSQETK 17 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 RSELSQDAEPAGS(1)QETK;RSELSQDAEPAGS(1)QETK 181.83 1.6101e-39 31196000.0 3535.7 3787.1000000000004 2975.9 3151.4 5156.9 3366.3 3915.0 3839.5 4924.4 4853.7 5201.8 True False 4132.439720434404 3979.8472139880496 3397.9273682729354 3923.493141471723 4398.32684130412 3722.5196316309066 4626.30482341917 4383.760882975605 3809.0312626509026 3757.245798958951 3910.049497623511 1.0568765748224056 1.0178508523758998 0.8690241313666648 1.0034382285585854 1.124877535176314 0.9520390045940382 1.183183186358892 1.1211522732998678 0.9741644613363575 0.9609202648822138 1.0 11.93297115550008 -5.289026220580216 5.81336478354918 1.0093501379381145 1.0576731314341439 0.0 0.08675410865958573 0.5102081879153786 59.192833199969094 0.011742383062960157 0.08180352529920844 5.140126170736146e-06 5.289026220580216 0.04832299349602942 RSELSQDAEPAGS(ph)QETK ddPTM_A549_PD325901_60min_R1 2 RSELSQDAEPAGSQETK 17 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 RSELSQDAEPAGS(0.999)QET(0.001)K;RSELSQDAEPAGS(1)QETK 142.79 1.3497e-16 38839000.0 8081.5 7960.299999999999 6722.6 7304.9 8814.8 7762.0 6411.6 7420.8 7463.700000000001 8371.8 8558.5 True False 8901.927930714142 8631.142417675279 7178.836062277813 7756.1070823683995 8195.678857409142 7698.788845482902 6655.596946562141 7272.786322495017 7150.026644715908 7843.2031192596705 7505.858756801515 1.1859972614922396 1.1499207082539458 0.9564310087466852 1.0333403989703536 1.091904220817177 1.0257039327454118 0.8867202491028892 0.9689479322941833 0.9525927513939474 1.044944139423416 1.0 12.873801426901464 -7.524999343668028 24.923948351002075 0.9694575226888645 1.0755040600259682 0.3977671033278819 0.065873794688107 52.78613951266733 620406.0432961484 0.009844100351908185 0.014659124282869251 2.98538713061135e-08 7.524999343668028 0.10604653733710367 RSELSQDAEPAGS(ph)QETKDSGSQEVLSELR ddPTM_A549_MK2206_60min_R1 2 RSELSQDAEPAGSQETKDSGSQEVLSELR 29 2 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 RSELSQDAEPAGS(1)QETKDSGSQEVLSELR;RSELSQDAEPAGS(0.999)QET(0.001)KDSGSQEVLSELR 118.74 3.2385000000000003e-21 11563100.0 1418.87 1489.9499999999998 1341.48 1137.3600000000001 1876.56 1802.17 1070.73 1176.29 2200.42 2463.7 2330.27 True False 1658.340567959035 1565.782090909004 1531.7220356835844 1416.013251058031 1600.5205098640008 1992.874433216373 1265.2677812463878 1343.0327097370432 1702.028383348694 1907.1484588860376 1751.5996468197814 0.946757765662908 0.8939155096039502 0.8744703953695078 0.8084114732661406 0.9137479062466808 1.1377453956642731 0.7223498723259155 0.7667463921766965 0.9716994328235397 1.088803861286837 1.0 10.774457348670449 -8.96998245074024 24.814933130995083 0.9875145385052979 0.8837974869276306 0.2329581250489654 0.10677277889659435 217.81798694475464 180067.4144521467 0.017910309302225022 0.018851138732632944 1.071562604775925e-09 8.96998245074024 -0.10371705157766731 RSES(ph)PPAELPSLR ddPTM_A549_MK2206_60min_R1 4 RSESPPAELPSLR 13 1 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.002)ES(0.998)PPAELPSLR;RSES(1)PPAELPSLR;RS(0.018)ES(0.982)PPAELPSLR;RS(0.005)ES(0.995)PPAELPSLR 161.99 4.665399999999999e-19 200425000.0 4721.64 6012.5 5166.59 4016.91 7492.799999999999 5282.5 5447.84 5736.7 7251.799999999999 7178.3 7433.6 True False 5518.53739898518 6318.510568536121 5899.290151431587 5001.05313032594 6390.619045652142 5841.49064376029 6437.64201001683 6549.894792906928 5609.278878744989 5556.717044454136 5587.631963077043 0.9876343745349659 1.1308029251548257 1.0557764345278957 0.8950219276023897 1.1437079406591595 1.04543224792913 1.1521234849676276 1.1722129940175907 1.00387407685599 0.9944672593278885 1.0 12.448021283482191 -8.939895037975573 24.99996128415628 1.0017081939774723 1.0733466219901666 0.15393644111491955 0.07658735637140102 98.18830520790777 40840.07770374703 0.013045821997849984 0.013888122044801169 1.1484311453836366e-09 8.939895037975573 0.07163842801269427 RSES(ph)PPAELPSLR ddPTM_A549_PD325901_60min_R1 3 RSESPPAELPSLR 13 1 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.134)ES(0.866)PPAELPSLR;RS(0.005)ES(0.995)PPAELPSLR;RS(0.005)ES(0.995)PPAELPSLR 153.14 1.4757e-13 208978000.0 8220.0 9013.1 9888.5 8582.8 10754.599999999999 9048.3 10139.7 9690.0 9625.5 10481.4 10478.0 True False 9054.488348755829 9772.665568477196 10559.593074381064 9112.940063046932 9999.23399735585 8974.6136447543 10525.571832156742 9496.725348342059 9220.973708577914 9819.602615233089 9189.272425514555 0.9853324539182786 1.0634863257881892 1.1491217786798587 0.9916933181504466 1.0881420785384912 0.9766402854523887 1.1454195005615322 1.0334578091268514 1.0034498142611747 1.0685941346094372 1.0 13.165734923145335 -8.610642888721884 4.6880295114415 1.0018194586740767 1.0584886809496508 0.022928250636858216 0.05858098603707059 0.2513362364586265 9.890866555396002 0.008600786791914006 0.00977528881206554 2.451077883562015e-09 8.610642888721884 0.05666922227557403 RSES(ph)PPAELPSLRR ddPTM_A549_PD325901_60min_R1 1 RSESPPAELPSLRR 14 2 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.212)ES(0.788)PPAELPSLRR 74.793 0.0001849 7389800.0 531.09 692.16 413.44 566.55 572.75 612.23 441.5 700.35 576.77 605.11 841.37 True False 585.0058658322057 750.4907523357308 441.49852461668723 601.5445067715942 532.5220158802337 607.2442018642092 458.30152409806993 686.3809698360536 552.5303626717031 566.9032513312811 737.8868238838689 0.7928124570012323 1.0170811133142628 0.5983282399499408 0.8152259768040895 0.7216852214236633 0.8229503254550312 0.6211000241009845 0.9301981653816311 0.7488009607807581 0.7682794067894919 1.0 9.527255744349583 -10.827443846401975 0.7786681683003498 1.019542381679304 0.782558056757658 0.0 0.13326468444899664 0.7313650333445529 0.6756738516190276 0.11238074723513966 0.02004281486156277 1.487839736996709e-11 10.827443846401975 -0.23698432492164612 RSESLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RSESLSPR 8 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 RS(0.001)ES(0.009)LS(0.99)PR;RS(0.003)ES(0.017)LS(0.981)PR 50.452 0.013078 6535400.0 1190.42 1034.1 883.21 761.69 1152.9 847.6 751.83 869.3900000000001 1088.3600000000001 1235.43 1309.23 True False 1311.2705620591144 1121.247236174266 943.1499417731819 808.7378613764995 1071.9242812890818 840.6974266208848 780.441302067162 852.0493344267396 1042.6200140738506 1157.424738960197 1148.2030098927678 1.142019791588576 0.9765235124048148 0.8214139256273714 0.7043509330741334 0.9335668623523207 0.7321853534414604 0.6797067202776698 0.7420720265367652 0.9080450104125944 1.008031444777601 1.0 10.16516202726135 -9.323178376811715 1.775909694329683 0.9718734917624697 0.8363516411866267 0.1670475057124723 0.13128074246512417 0.43249613495628664 2.8053714320186005 0.029600715759798887 0.025942824739397675 4.751400326454899e-10 9.323178376811715 -0.13552185057584298 RSET(ph)PPHWR ddPTM_A549_MK2206_60min_R1 4 RSETPPHWR 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 RS(0.103)ET(0.897)PPHWR;RS(0.184)ET(0.816)PPHWR;RS(0.214)ET(0.786)PPHWR;RS(0.033)ET(0.967)PPHWR 68.676 0.0017638999999999999 81568000.0 3380.2799999999997 2988.33 2018.3600000000001 2232.6099999999997 4187.16 3081.6800000000003 2690.55 2983.25 4700.55 5338.209999999999 5080.8 True False 3950.7886240885823 3140.4232328105677 2304.5937978518627 2779.59955022567 3571.2343106973112 3407.781332146376 3179.388107956692 3406.134823319959 3635.8829302359086 4132.304653452141 3819.097137053624 1.0344823612254483 0.8222946733513453 0.6034394295689013 0.7278158817322173 0.9350991039344092 0.8923002505182227 0.8324973138571548 0.8918691253681337 0.9520268272204612 1.0820108798385137 1.0 11.899015899402128 -8.4337605986432 0.6371774097736881 0.9913338661267356 0.8072899483818191 0.33758885268350647 0.10753297323643371 0.5974577441440034 0.5113981371208582 0.029107184321612828 0.036007778256648464 3.6833195773406803e-09 8.4337605986432 -0.18404391774491646 RSET(ph)PPHWR ddPTM_A549_PD325901_60min_R1 4 RSETPPHWR 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 RS(0.245)ET(0.755)PPHWR;RS(0.056)ET(0.944)PPHWR;RS(0.032)ET(0.968)PPHWR;RS(0.057)ET(0.943)PPHWR 90.697 0.00047373 85950000.0 7905.469999999999 6806.86 6700.38 7479.3099999999995 7913.49 7661.83 6352.5 5500.93 8175.7 7943.18 9752.25 True False 8708.027494700578 7380.497980877247 7155.108079458106 7941.289991954554 7357.673762458435 7599.434596751641 6594.247863721385 5391.209635753895 7832.103760762605 7441.646259208422 8552.785074606243 1.0181510956653477 0.8629350458940456 0.8365822380714408 0.9285033965757825 0.8602664159425485 0.8885333292560853 0.7710059128341856 0.6303455060224459 0.915737235583835 0.8700845624313813 1.0 13.062178571216382 -9.243336281615893 2.717892480910015 0.9701726082045038 0.8489942592255977 0.07776167199397666 0.09741528921378813 0.26121272052890165 3.9622149865188443 0.019022929437180598 0.017660006210342916 5.710363023035141e-10 9.243336281615893 -0.12117834897890611 RSFS(ph)ADNFIGIQR ddPTM_A549_MK2206_60min_R1 2 RSFSADNFIGIQR 13 1 Q8N7R7-3;Q8N7R7;Q8N7R7-2 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 RS(0.206)FS(0.794)ADNFIGIQR;RS(0.196)FS(0.804)ADNFIGIQR 84.946 0.00027152 9092400.0 4043.6000000000004 4540.2 4912.1 3911.3 5810.4 4953.3 3774.4 4281.200000000001 7211.3 7130.9 7214.1 True False 4726.060823471607 4771.276787237868 5608.709642694138 4869.568675584932 4955.697856990336 5477.454918265568 4460.159623375051 4888.073210625125 5577.952064079777 5520.024737374864 5422.6398709688565 0.8715424472079515 0.8798808146529912 1.0343135034139814 0.8980070208340964 0.9138902775973775 1.010108553878006 0.8225070684213 0.901419479614415 1.028641436054497 1.017958940428144 1.0 12.404779645754772 -8.762141652568886 24.999998776833248 1.0135251266908525 0.9184571536693463 0.37330872603928333 0.05711126240877734 14.393785377423542 512396.31056154816 0.009557401997395168 0.010471735281673387 1.7292522420441565e-09 8.762141652568886 -0.09506797302150616 RSFS(ph)ADNFIGIQR ddPTM_A549_PD325901_60min_R1 2 RSFSADNFIGIQR 13 1 Q8N7R7-3;Q8N7R7;Q8N7R7-2 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 RS(0.058)FS(0.942)ADNFIGIQR;RS(0.07)FS(0.93)ADNFIGIQR 123.1 5.1227e-06 40012000.0 3564.7400000000002 3816.51 3237.07 4261.78 4479.25 3903.5699999999997 3415.83 4769.68 4944.8 4284.25 4564.3 True False 3926.629780577113 4138.140691743009 3456.75703628323 4525.0204713953635 4164.642932573615 3871.7806201445082 3545.8212798638992 4674.544990658426 4736.9872520051995 4013.7417238453213 4002.920035481585 0.9809413492579815 1.0337805039977912 0.8635588534476815 1.1304298939988606 1.0404012310159911 0.9672390619411163 0.885808671778103 1.1677837551646317 1.1833829329631613 1.0027034485495123 1.0 11.966837080610759 -8.272248732704503 24.935434461874863 1.0951060996164281 0.9900726225687112 0.24306967017236325 0.08648869679843454 826.6338293125901 1906908.28277637 0.015731574700091434 0.019114910069330915 5.342582869607871e-09 8.272248732704503 -0.10503347704771693 RSFS(ph)KEVEER ddPTM_A549_MK2206_60min_R1 4 RSFSKEVEER 10 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 RS(0.441)FS(0.559)KEVEER;RS(0.128)FS(0.872)KEVEER;RS(0.155)FS(0.845)KEVEER;RS(0.116)FS(0.884)KEVEER 118.52 1.3443e-05 391122000.0 12244.6 14410.699999999999 13304.5 12007.600000000002 20535.1 15959.099999999999 14487.0 16017.9 22042.4 20809.100000000002 21036.4 True False 14311.189128271946 15144.143076923654 15191.278158267169 14949.462539041651 17514.413992682486 17647.881369206785 17119.100377234627 18288.486377761412 17049.831594479787 16108.30985745239 15812.481304895864 0.9050565089895735 0.9577335008285335 0.9607143790622944 0.9454216735998919 1.1076322339909848 1.1160728685726664 1.0826321338912324 1.1565854861816611 1.0782514942294865 1.0187085471819612 1.0 13.948776153658375 -6.7461605181781445 24.894798100026108 1.0606266432479932 0.944658956994813 0.6677427727664517 0.04544443488060495 150.44035150624362 245120.3603026562 0.007975766904406876 0.016553914888496907 1.7940704037176263e-07 6.7461605181781445 -0.11596768625318021 RSFS(ph)KEVEER ddPTM_A549_PD325901_60min_R1 7 RSFSKEVEER 10 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 RS(0.171)FS(0.829)KEVEER;RS(0.167)FS(0.833)KEVEER;RS(0.216)FS(0.784)KEVEER;RS(0.086)FS(0.914)KEVEER;RS(0.349)FS(0.651)KEVEER;RS(0.144)FS(0.856)KEVEER;RS(0.148)FS(0.852)KEVEER 132.97 1.9162e-07 513046000.0 28421.699999999997 29162.3 32395.2 30931.6 35898.59999999999 31375.600000000006 32916.0 35531.8 32752.0 33865.9 34488.1 True False 31307.05006105032 31619.909366100732 34593.733080162776 32842.174681239514 33377.20617944681 31120.08751614704 34168.63639232635 34823.09037484212 31375.54733814802 31727.601294409367 30246.282338078683 1.0350710117400503 1.0454147393279045 1.1437350446408698 1.0858251706489137 1.1035143362867588 1.0288896720694918 1.1296805343018834 1.1513180359029263 1.0373356628575685 1.048975240651833 1.0 14.884470206828478 -8.955970196123623 7.723309877304604 1.0163024319218277 1.0906059791279208 0.3086879661827563 0.04101304244600304 0.16047209108764118 23.16113921375911 0.007168243810882173 0.0075360639851569785 1.1066997297047101e-09 8.955970196123623 0.07430354720609311 RSFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_A549_PD325901_60min_R1 1 RSFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 33 2 Q12802;A0A087WTD7 Q12802 AKAP13 A-kinase anchor protein 13 1 RS(0.181)FS(0.819)LEGLTGGAGVGNKPSSSLEVSSANAEELR 254.14 2.0733e-149 12198000.0 2427.1 2354.3 2082.1 2798.1 2856.9 2600.2 2548.5 2548.4 2659.6 2024.2 2807.3 True False 2673.4974052634143 2552.7051234165674 2223.4038266844145 2970.9322820538296 2656.241199769953 2579.0248332935635 2645.484562092709 2497.5701628188754 2547.8262610081356 1896.391666547867 2462.0198969409244 1.0858959379594177 1.0368336692113334 0.9030811771452408 1.2067052283960955 1.0788869753125674 1.0475239605082065 1.074517945764671 1.014439471395874 1.034852018935276 0.7702584649718494 1.0 11.265626705746037 -9.208747333273795 0.6776347568747045 1.0061581424121886 1.0592288053115912 0.14440292205706073 0.09792111952670011 1.1584934702994103 1.171549338613044 0.02264616730515355 0.016940153736838715 6.183760584336714e-10 9.208747333273795 0.053070662899402654 RSFS(ph)SQRPVDR ddPTM_A549_MK2206_60min_R1 2 RSFSSQRPVDR 11 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 RS(0.245)FS(0.738)S(0.016)QRPVDR;RS(0.208)FS(0.783)S(0.009)QRPVDR 91.969 9.6741e-05 118393000.0 5153.4 5859.299999999999 5253.0 3919.2 6025.700000000001 4979.799999999999 5514.8 4518.299999999999 7773.3 7502.5 7554.5 True False 6023.167931466659 6157.513342906223 5997.954388769018 4879.40417593957 5139.327512196521 5506.759130676288 6516.767775272555 5158.782861713418 6012.659961409363 5807.680039287453 5678.509156406788 1.0606952926493056 1.08435386354163 1.056255123231036 0.8592755671502923 0.9050487320951249 0.9697543807714525 1.1476194888089597 0.9084748689527096 1.0588448122207514 1.0227473231657869 1.0 12.471296496966826 RSGKNS(ph)QEDS(ph)EDSEDKDVK ddPTM_A549_PD325901_60min_R1 1 RSGKNSQEDSEDSEDKDVK 19 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 RS(0.402)GKNS(0.601)QEDS(0.804)EDS(0.193)EDKDVK 51.398 0.0048935 11577000.0 2346.3 2705.0 2809.4 2717.6 3384.6 3668.7 3220.6 3500.9 3025.5 2976.6 3250.0 True False 2584.4946487452326 2932.9598431983254 3000.0627782946017 2885.459979882595 3146.877372236124 3638.82332355361 3343.1616953799435 3431.07180309708 2898.3487564596626 2788.6569680102675 2850.270603447442 0.9067541326143735 1.029011013779137 1.052553667945066 1.0123459773933712 1.1040626698496387 1.2766588965806973 1.1729278235323841 1.2037705468902324 1.0168679257871407 0.9783832330296456 1.0 11.476883179279454 -3.6130104387988697 14.688449884020818 1.0504276180710217 0.5487696869317706 0.0 0.10616998726153865 0.0 0.0 0.014950668823330699 0.0 0.00024377522233093088 3.6130104387988697 -0.5016579311392511 RSGKNS(ph)QEDSEDSEDKDVK ddPTM_A549_PD325901_60min_R1 1 RSGKNSQEDSEDSEDKDVK 19 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 RS(0.432)GKNS(0.568)QEDSEDSEDKDVK 91.12799999999999 1.4124e-06 29538000.0 1476.1 1970.2 1535.4 2030.6 1732.6 2551.8 2115.4 1943.2 2001.3 2019.8 1893.9 True False 1625.9525853526127 2136.2356684175024 1639.60147711025 2156.025550172798 1610.9081531455136 2531.0189868465923 2195.902704591296 1904.4413515890901 1917.1923207082193 1892.2694832987747 1660.9623064212637 0.9789220255430819 1.286143376137337 0.9871394858098628 1.2980580846643086 0.9698643653247029 1.5238268665469998 1.322066549073364 1.1465891454770158 1.1542660018811823 1.1392609428782818 1.0 10.697803618073056 -10.041181729790715 0.826384114663619 1.0126682202901045 1.1933239500422101 0.05034988711941768 0.1658156854249656 0.7500017349726934 1.0294282825992818 0.06901777119699593 0.03110996424849921 9.095326006150887e-11 10.041181729790715 0.18065572975210564 RSGS(ph)FGK ddPTM_A549_MK2206_60min_R1 4 RSGSFGK 7 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RS(0.006)GS(0.994)FGK;RS(0.052)GS(0.948)FGK;RS(0.174)GS(0.826)FGK;RS(0.006)GS(0.994)FGK 70.55199999999999 0.0088586 237454000.0 17830.5 16266.0 12634.599999999999 11719.300000000001 21036.9 16204.1 15461.1 15014.8 24689.1 22180.3 20520.0 True False 20839.85248612882 17093.869922296635 14426.37626505636 14590.529026099375 17942.399877412918 17918.80710658896 18270.181738279996 17143.193880896502 19097.05827039121 17169.754825112635 15424.31767681082 1.3511036872288884 1.108241562477402 0.9353007742277779 0.9459432392289886 1.1632540416609691 1.1617244588736912 1.1845050212981347 1.111439367374407 1.2381136508295632 1.1131613848258541 1.0 13.912919050055162 RSGS(ph)FGK ddPTM_A549_PD325901_60min_R1 3 RSGSFGK 7 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RS(0.317)GS(0.683)FGK;RS(0.008)GS(0.992)FGK;RS(0.027)GS(0.973)FGK 78.939 0.0069207999999999995 366782100.0 14291.54 14267.3 12276.300000000001 12169.05 13636.6 10371.0 10986.9 12124.349999999999 10518.29 13789.4 13811.0 True False 15742.406619924317 15469.6554420937 13109.443541388915 12920.70458058223 12678.812259716104 10286.542014494096 11405.01249176237 11882.520327881419 10076.242849638764 12918.734930686272 12112.334555142337 1.299700445711419 1.2771819810348617 1.0823217837739836 1.0667394069871277 1.04676866395944 0.8492617147969139 0.9416031599721897 0.9810264300234879 0.8318993174904384 1.066576791771457 1.0 13.564189339257437 -5.958650073105615 0.7912263784055704 0.9213245810372662 1.3799676657473552 0.7361036127854051 0.07288076844214456 0.398956092089266 0.30948955733987943 0.011713946017486184 0.12988478052868754 1.0998917053361248e-06 5.958650073105615 0.45864308471008897 RSGS(ph)FSK ddPTM_A549_MK2206_60min_R1 4 RSGSFSK 7 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5 Q07866-6 KLC1 Kinesin light chain 1 1 RS(0.002)GS(0.998)FSK;RSGS(1)FSK;RS(0.082)GS(0.917)FS(0.001)K;RS(0.189)GS(0.809)FS(0.003)K 88.39200000000001 0.0053492 50924600.0 9302.71 8599.0 7175.1900000000005 5614.8 10984.7 8394.19 8814.39 8758.529999999999 11426.300000000001 11935.0 11406.300000000001 True False 10872.780018576892 9036.65237070139 8192.73983452343 6990.4262520579505 9368.865181344101 9282.457614187635 10415.850567687794 10000.07844937318 8838.26129405167 9238.875210782506 8573.800912134859 1.268140015146397 1.0539843954052441 0.9555551754097653 0.8153240696508486 1.0927318323993218 1.0826537389094006 1.2148463294669936 1.1663530039774601 1.0308451741097124 1.0775705320736266 1.0 13.065719202118997 -8.981303170978737 21.178204219421794 1.0136077083000388 1.0737830643166713 0.01784640765208212 0.11760012876111181 59.98923383902541 67955.03770052629 0.021771672595886863 0.02218230460513423 1.0439911785819673e-09 8.981303170978737 0.060175356016632486 RSGS(ph)FSK ddPTM_A549_PD325901_60min_R1 3 RSGSFSK 7 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5 Q07866-6 KLC1 Kinesin light chain 1 1 RS(0.008)GS(0.987)FS(0.005)K;RS(0.115)GS(0.873)FS(0.012)K;RSGS(1)FSK 91.65799999999999 0.0051758 61357000.0 8231.7 7781.5 7048.4 6566.0 7873.200000000001 6745.299999999999 6199.9 6770.5 6590.2 8689.8 9209.1 True False 9067.37612414274 8437.274314176628 7526.746809472371 6971.56690753206 7320.213593065482 6690.368513197082 6435.840587215454 6635.457066145497 6313.236812037835 8141.12454498945 8076.439081294716 1.1226947956733884 1.04467751557956 0.9319387831333429 0.8631981046793785 0.9063664715826713 0.8283809790248011 0.7968661092387933 0.8215820114972974 0.7816856845561416 1.0080091563922704 1.0 12.979503630594829 -5.686938370097909 1.78992031564038 0.8759496462846225 1.1303829439632358 0.569571775661821 0.07040676864259075 0.29723611718462406 1.5960652966093072 0.012316514694461647 0.09648973387225793 2.056182364201401e-06 5.686938370097909 0.25443329767861333 RSGS(ph)LER ddPTM_A549_MK2206_60min_R1 1 RSGSLER 7 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.295)GS(0.705)LER 48.091 0.04653 24489000.0 795.19 851.78 568.83 566.82 549.48 496.6 708.95 658.17 721.07 1140.9 1084.1 True False 929.3986314710622 895.1319637534627 649.4986474326067 705.6909254455171 468.6522198917546 549.149882383599 837.75703820256 751.46761306109 557.7487963121777 883.169897610537 814.8880503621156 1.1405230829658886 1.0984723157440937 0.7970403384170206 0.8659973908464187 0.5751123969525599 0.6738961040594112 1.028063962688227 0.9221728220547066 0.6844483681707301 1.0837929175892058 1.0 9.670458064724581 -5.73217889715386 7.130058993631979 0.8328322821257487 1.1230706054744932 0.3187619107400266 0.15193120261544582 0.15739675793156707 26.551127382101246 0.02136354337799586 0.08121233321506238 1.852768262931002e-06 5.73217889715386 0.29023832334874455 RSGS(ph)LER ddPTM_A549_PD325901_60min_R1 1 RSGSLER 7 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.169)GS(0.831)LER 71.61399999999999 0.016382 27608000.0 1552.2 1543.9 1305.0 1432.3 1527.8 1306.0 1447.5 1436.2 1379.0 1940.4 1812.1 True False 1709.7782013307542 1674.0098713175207 1393.5651476024973 1520.7699180106856 1420.4925986238686 1295.3643690029207 1502.5854046023933 1407.5538643228963 1321.0454256016774 1817.882812849265 1589.223187848341 1.0758578243787351 1.0533510233914802 0.8768844793217834 0.9569265850378544 0.8938282611815414 0.8150927943335149 0.945484193844889 0.88568671479592 0.8312522971617655 1.1438813797516432 1.0 10.634106033257217 -5.728653799155065 8.454475000517757 0.9096939525565164 1.0657133229993663 0.24905527783611114 0.08726381507235133 0.17166606184480887 38.411303280865944 0.009191696101154676 0.03514237541843568 1.867868081453676e-06 5.728653799155065 0.15601937044284986 RSGS(ph)PLEK ddPTM_A549_MK2206_60min_R1 1 RSGSPLEK 8 1 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RS(0.149)GS(0.851)PLEK 48.981 0.014361 27851000.0 1353.4 1643.9 1384.7 1060.6 1687.0 2009.0 1338.2 1351.6 2051.4 2232.1 2255.1 True False 1581.8208325468563 1727.5674883353897 1581.071281577853 1320.4470476121435 1438.8445347553875 2221.591046533729 1581.3336180586305 1543.1934391014017 1586.7611754126533 1727.8670597392236 1695.0964324062415 0.9331745393985715 1.0191558753286116 0.9327323515945778 0.7789804888785756 0.8488275399842022 1.3105986208584677 0.9328871135749361 0.9103868131624766 0.9360890301445547 1.0193326035654875 1.0 10.727151633892094 RSGS(ph)PLEKDSDGLR ddPTM_A549_MK2206_60min_R1 1 RSGSPLEKDSDGLR 14 2 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RS(0.487)GS(0.512)PLEKDS(0.001)DGLR 66.536 0.00085655 18771000.0 2678.2 2940.6 3116.2 2752.0 3751.7 2808.3 2591.1 2296.3 3989.1 5098.7 4883.9 True False 3130.2146842965803 3090.263979681882 3558.1240179482215 3426.2401235419743 3199.829899846936 3105.472442001331 3061.869330258342 2621.8075571238132 3085.5752192837135 3946.900128799061 3671.0928412171697 0.8526656283796793 0.8417831183635468 0.9692274676356338 0.9333024992105584 0.8716287051966836 0.8459258799272686 0.8340484598703757 0.7141763149347483 0.8405059072983496 1.0751294776545193 1.0 11.841993885035235 -10.63959607359995 1.0364158475879306 0.9958044929777702 0.8573011874907318 0.5072309537372957 0.0659210446156541 0.4112459340422516 0.8205587653065793 0.038686927417881184 0.01174444466149705 2.2929993224404078e-11 10.63959607359995 -0.13850330548703838 RSGS(ph)PLEKDSDGLR ddPTM_A549_PD325901_60min_R1 1 RSGSPLEKDSDGLR 14 2 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RS(0.152)GS(0.848)PLEKDSDGLR 92.307 1.2701e-05 25699000.0 2122.3 2738.5 2136.8 1967.8 2488.2 2954.9 2546.4 2414.8 2482.3 2322.7 2190.4 True False 2337.754333645316 2969.283005766587 2281.8160976222343 2089.346536801947 2313.437415824004 2930.8362740939724 2643.3046454435453 2366.6349196260476 2377.9775634307775 2176.0443256055382 1920.9946860896225 1.216949922128129 1.5457007909849352 1.1878305099672608 1.0876378534159412 1.204291418698944 1.5256868201233726 1.3760083068341313 1.231984105298891 1.23788867332652 1.13276957055779 1.0 10.907637812846811 -10.13641741753208 0.6188138204973795 0.9957744862141015 1.3028008512195384 0.27229446463148943 0.13837639098194332 0.6412773835014903 0.464017530958812 0.09656823257972862 0.0316105056668725 7.304366945138873e-11 10.13641741753208 0.3070263650054369 RSHS(ph)GPAGSFNKPAIR ddPTM_A549_PD325901_60min_R1 1 RSHSGPAGSFNKPAIR 16 2 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 RS(0.122)HS(0.878)GPAGSFNKPAIR 48.968 0.004848399999999999 18927000.0 1981.2 2554.5 2367.1 2642.5 3360.2 3948.8 2605.7 3122.5 3496.0 3478.3 4095.3 True False 2182.329965517647 2769.77668001853 2527.745640528639 2805.7212234470708 3124.191144060693 3916.642282020468 2704.861339393752 3060.219287946136 3349.0752776674867 3258.679544389609 3591.604062245632 0.6076198622387002 0.7711809631618306 0.7037929562169442 0.7811888991162372 0.8698595641155692 1.0904994576633837 0.7531067713801815 0.8520480640153718 0.9324734073202642 0.9073047830200237 1.0 11.810412601077722 -3.821498128750151 0.23475776122085218 0.99339089154961 4.560750319186317e-13 0.5364066799482239 0.0896469192311388 10.124149726159386 0.25129044342944423 0.051392359857749516 3.2958422474167954 0.00015083491095683988 3.821498128750151 -0.9933908915491539 RSHS(ph)LAK ddPTM_A549_MK2206_60min_R1 1 RSHSLAK 7 1 Q8WYL5;Q8WYL5-4 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 RS(0.021)HS(0.979)LAK 45.137 0.030839 4064400.0 865.38 936.63 779.12 645.33 1084.8 889.62 737.07 839.41 979.64 1209.5 1158.7 True False 1011.4349874903206 984.3004663298108 889.6109315396379 803.4358789699647 925.2273570258709 983.7589979180373 870.9860782113836 958.3989380853119 757.7531041636203 936.273109965768 870.9628115068568 1.1612837817270663 1.1301291551436827 1.0214109256863884 0.922468638563266 1.0623040901426442 1.1295074656701256 1.000026713774939 1.100390195107391 0.8700177483498154 1.0749863227178638 1.0 9.766467309517312 -8.752841016495132 24.99376666403895 0.938619490660592 1.0616136671136356 0.11880235384668336 0.08123055117029424 157.9130433947713 459022.15777965536 0.013509823398770987 0.015200951264123434 1.7666844378820095e-09 8.752841016495132 0.12299417645304356 RSIS(ph)SPNVNR ddPTM_A549_MK2206_60min_R1 1 RSISSPNVNR 10 1 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 RS(0.039)IS(0.742)S(0.219)PNVNR 58.511 0.0088793 14967000.0 1654.3 1483.1 1547.3 1446.2 1775.7 1281.3 1298.7 1400.9 2440.7 1959.3 2129.6 True False 1933.5053962481636 1558.5834551677196 1766.7304065757285 1800.5190649223857 1514.4968822555666 1416.8863155418946 1534.6569793549113 1599.4818650763195 1887.8853469970063 1516.692769207053 1600.7615460300344 1.2078659691965676 0.9736512343347337 1.1036811890923448 1.1247890539273382 0.9461102348514003 0.8851326539270267 0.9587043011877281 0.9992005799009299 1.1793670029612173 0.9474820112767727 1.0 10.644542700585275 -5.241202054478576 22.813878512522244 1.0503130000539076 1.207866473160378 0.1775784384298702 0.09203745467728364 2037.8214006586484 2297148.760963325 0.014265413361615764 0.6892615848669841 5.738494180094027e-06 5.241202054478576 0.1575534731064705 RSIS(ph)SPNVNR ddPTM_A549_PD325901_60min_R1 2 RSISSPNVNR 10 1 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 RS(0.019)IS(0.85)S(0.131)PNVNR;RS(0.242)IS(0.634)S(0.124)PNVNR 56.938 0.011405 46494000.0 6493.5 6127.5 5936.5 6635.0 6868.3 6773.9 5761.3 6279.0 6020.7 6854.700000000001 8156.2 True False 7152.715339737952 6643.885929463124 6339.386589074502 7044.82888082169 6385.894302348686 6718.73560427939 5980.54942420433 6153.760419219788 5767.670916548237 6421.893072169582 7153.0391064117 0.9999547371866794 0.9288200205011893 0.8862507942102718 0.9848721328123294 0.8927526058993057 0.9392840587516126 0.8360851010647492 0.8603001224617661 0.8063245329357036 0.8977852597524949 1.0 12.804340613573608 -6.797474803296136 24.84222704834048 0.8987456913365555 0.9439117628077183 0.19707806788392723 0.0557998338929905 360.084304680249 248235.1432526959 0.011248108055091594 0.021257415059609753 1.5941353658651156e-07 6.797474803296136 0.045166071471162805 RSIVPS(ph)SPQPQR ddPTM_A549_MK2206_60min_R1 1 RSIVPSSPQPQR 12 1 A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2;H7C5K2;H7C5C6;H7C5A5;Q9P246-3 A0A1X7SBY3 STIM2 Stromal interaction molecule 2 1 RSIVPS(0.635)S(0.365)PQPQR 58.071000000000005 0.0053936999999999995 5328500.0 2313.7 2581.1 2625.9 2395.7 2477.4 2059.0 2243.1 1942.0 3281.8 3471.5 3585.1 True False 2704.1959954659837 2712.466965230532 2998.2921053623763 2982.646607547058 2112.9777417919354 2276.8820133464155 2650.642234843306 2217.284447125569 2538.477539957709 2687.2857389385395 2694.8207262736087 1.0034789955045875 1.0065482051495591 1.1126128265713642 1.1068070608435072 0.7840884260652677 0.8449103835173787 0.9836061482682031 0.8227947876115768 0.9419838266821962 0.9972039003331072 1.0 11.395973585128255 -6.7068371108266955 24.999999749962026 0.9406377395078165 1.057678795254092 0.41946014244205376 0.07811044701024816 88.98421230618288 40741.37437915135 0.011973559512569978 0.024924939614533452 1.9640968049942505e-07 6.7068371108266955 0.11704105574627555 RSIVPSS(ph)PQPQR ddPTM_A549_MK2206_60min_R1 1 RSIVPSSPQPQR 12 1 A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2;H7C5K2;H7C5C6;H7C5A5;Q9P246-3 A0A1X7SBY3 STIM2 Stromal interaction molecule 2 1 RSIVPS(0.128)S(0.872)PQPQR 79.61399999999999 0.00037156 6533800.0 2224.9 2350.5 1823.7 1761.8 2724.2 1684.6 2340.5 2331.7 2782.4 3076.9 3051.2 True False 2600.4087264175446 2470.1304102027684 2082.3280827713797 2193.441079090207 2323.473788725917 1862.8632538530226 2765.7385540772834 2662.2256155317664 2152.1908425797824 2381.8261530001428 2293.5028311639935 1.1338153548726124 1.0770121478110988 0.9079247928002605 0.9563716465861072 1.0130677656703448 0.8122349920569256 1.2059015216796667 1.1607684016595 0.9383859541553333 1.0385102301318387 1.0 11.163336972986139 -5.566018726151508 7.214153989496486 0.9868240547164183 1.1202500222755993 0.1146153581112922 0.10529853485656972 0.22562078414497655 30.068838734395268 0.014158366309862773 0.056444092818359944 2.716322142421963e-06 5.566018726151508 0.133425967559181 RSIVPSS(ph)PQPQR ddPTM_A549_PD325901_60min_R1 2 RSIVPSSPQPQR 12 1 A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2;H7C5K2;H7C5C6;H7C5A5;Q9P246-3 A0A1X7SBY3 STIM2 Stromal interaction molecule 2 1 RSIVPS(0.145)S(0.855)PQPQR;RSIVPS(0.162)S(0.838)PQPQR 98.943 0.00010447 19563000.0 5258.9 5025.2 5371.3 5484.200000000001 6059.200000000001 6125.6 5245.8 5886.6 5518.299999999999 6399.5 6581.3 True False 5792.779656602434 5448.691239940935 5735.828718250802 5822.946578478117 5633.622695105219 6075.71514453621 5445.4317896119055 5769.187145051637 5286.38504140517 5995.4344778545 5771.841822298047 1.0036275828321384 0.9440125713236455 0.993760552496758 1.0088541505040278 0.9760528560122951 1.0526475484938318 0.9434478555137912 0.9995400641029083 0.9158922236889033 1.038738527915415 1.0 12.494816047881166 RSKS(ph)DGEAKPEPSPSPR ddPTM_A549_PD325901_60min_R1 1 RSKSDGEAKPEPSPSPR 17 3 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RS(0.18)KS(0.82)DGEAKPEPSPSPR 111.66 1.2452e-09 10937000.0 1930.5 1356.3 1670.3 2020.4 2357.6 2219.9 2028.9 1875.8 1884.5 2478.9 2669.0 True False 2126.482938841012 1470.600160935264 1783.6566023298483 2145.19551933868 2192.0103092784607 2201.8218704055 2106.1108997566794 1838.3856974633668 1805.3010185252788 2322.38183094828 2340.729920184992 0.9084700120691209 0.6282656312690018 0.7620087165754188 0.916464347654915 0.9364644294824165 0.9406560968091039 0.8997667272908743 0.7853899254289346 0.7712555826955905 0.9921613813372959 1.0 11.192742766618242 -10.92170191610562 1.1664027065215345 1.0003745588519535 0.8330660705639384 0.3017917073272033 0.09177241975966298 0.5199151282469708 1.2521694053876475 0.07003030567499037 0.016396816603086745 1.1975622123184753e-11 10.92170191610562 -0.16730848828801503 RSLS(ph)PILPGR ddPTM_A549_MK2206_60min_R1 1 RSLSPILPGR 10 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RS(0.037)LS(0.963)PILPGR 82.54299999999999 0.00043483 5086800.0 132.19 275.02 257.48 192.96 297.12 294.69 210.34 294.37 507.36 351.02 514.65 True False 154.50044026479162 289.0173432946034 293.9945356977437 240.23520866230353 253.41404159248404 325.8739002006097 248.55605531493953 336.0978489703162 392.4437700874347 271.7243382060223 386.8482013825868 0.3993825994604874 0.7471078895072069 0.7599738984103165 0.6210063994189666 0.6550735939492233 0.8423818413422725 0.6425157320794197 0.868810680181813 1.01446450748601 0.7024055876048683 1.0 8.595623755952193 -8.476077650799795 2.568671458344062 1.007425476845395 0.6766291361549999 0.32060125661886196 0.14005743451398286 0.11594807470535506 1.516949148907659 0.017242616827986893 0.020554975791606984 3.341352921052435e-09 8.476077650799795 -0.3307963406903951 RSLS(ph)PILPGR ddPTM_A549_PD325901_60min_R1 2 RSLSPILPGR 10 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RS(0.247)LS(0.753)PILPGR;RSLS(1)PILPGR 123.92 1.0592000000000001e-05 20427600.0 919.8 601.98 661.6199999999999 920.79 1037.03 1119.18 853.3 852.54 903.74 1251.9 1164.6100000000001 True False 1013.1774188790286 652.7109672489937 706.5215118442642 977.6651070341827 964.1925903592821 1110.0657691429467 885.772798443676 835.5354208953086 865.7589506405075 1172.8548203494097 1021.3703530710534 0.9919784883442226 0.6390541543392407 0.6917388092574818 0.9572092082901585 0.9440185799990676 1.0868396226747763 0.8672395823712103 0.8180533323519946 0.8476444886395478 1.1483149249661235 1.0 9.996290372872323 RSLS(ph)VEHLETK ddPTM_A549_PD325901_60min_R1 1 RSLSVEHLETK 11 1 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 RS(0.493)LS(0.507)VEHLETK 70.654 0.0012235 11037000.0 2078.9 2342.5 2359.7 2279.4 2557.6 2800.3 2286.9 2696.7 2434.5 2400.1 2828.1 True False 2289.9483975947073 2539.9106960044664 2519.8434320288225 2420.1933611070003 2377.962999241004 2777.4952852365063 2373.9292309396974 2642.912202979776 2332.1864312018 2248.557276396372 2480.261628802987 0.923268888653441 1.0240495061120898 1.0159587209535383 0.9757814792607276 0.9587549037674086 1.119839638279196 0.9571285558634363 1.065577990760308 0.9402985572644406 0.9065806809588715 1.0 11.276276595059866 -8.803155293019712 24.99926450045347 0.9718076738523023 1.0057533383436348 0.1302260897051336 0.056689753687903584 283.4347315892739 169853.83195933426 0.008951998652967157 0.009530179224614835 1.5734201475389462e-09 8.803155293019712 0.03394566449133252 RSLT(ph)NS(ph)HLEK ddPTM_A549_PD325901_60min_R1 1 RSLTNSHLEK 10 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 2 RS(0.449)LT(0.72)NS(0.831)HLEK 40.025 0.043479000000000004 14635000.0 2389.6 2194.9 2385.7 2612.0 2340.9 2073.7 2387.1 2769.9 2731.8 2769.5 3101.0 True False 2632.1904328694554 2379.8719260022203 2547.6079483795247 2773.337307717597 2176.4832596665888 2056.8124747330426 2477.9423967712405 2714.652171555485 2616.9919460904 2594.6332973541726 2719.5966588586184 0.9678605922299351 0.8750826775177108 0.9367594786826678 1.019760521724399 0.8002963426863571 0.7562932054771172 0.9111433449882244 0.9981819041853035 0.9622720845629805 0.9540507740008434 1.0 11.409176987088896 -8.176838512773521 5.37036537872261 0.9828178641959028 0.8910348932081011 0.2499060160913681 0.0695129880110803 0.23577314453484305 11.41346929707792 0.011577596081008286 0.014991942277674718 6.6552057609230185e-09 8.176838512773521 -0.09178297098780164 RSNRNS(ph)IER ddPTM_A549_PD325901_60min_R1 1 RSNRNSIER 9 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 RS(0.108)NRNS(0.892)IER 57.175 0.0028831 6486900.0 288.06 241.84 428.78 186.44 591.5 414.67 217.49 415.96 479.25 529.09 625.82 True False 317.3036391414359 262.2207055375538 457.87958926360056 197.9559753640385 549.9550805642224 411.29306500340033 225.76670096509454 407.66335148569266 459.10878913676856 495.68316710493593 548.848107399839 0.5781265068848609 0.47776552747866996 0.8342555674151804 0.3606753356622699 1.0020169025809849 0.7493750264565838 0.41134641428329133 0.7427616967051096 0.8364951667808251 0.9031336000286649 1.0 9.100263131317138 -9.261776211804369 0.38766004788832936 1.0302397378926273 0.598080560732726 0.30009529021362236 0.18235298905533306 0.8437841175256345 0.32025436485185543 0.13699873096685278 0.08143612306059843 5.472979081309438e-10 9.261776211804369 -0.4321591771599014 RSNS(ph)PDKFK ddPTM_A549_MK2206_60min_R1 2 RSNSPDKFK 9 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 RS(0.037)NS(0.963)PDKFK;RSNS(1)PDKFK 120.57 2.8295999999999998e-05 711320000.0 24680.0 23338.0 21874.2 20153.1 29201.0 23235.1 22921.0 25360.0 28802.0 31222.0 29565.0 True False 28845.38063193177 24525.80451534237 24976.290479880314 25090.610404707044 24905.571582330795 25693.82285978889 27085.44900577032 28954.85766174276 22278.392987342897 24168.928515379248 22223.194547510306 1.29798533555849 1.1036129150068583 1.1238838964616111 1.129028067997451 1.1207016853083798 1.1561714408276824 1.2187918774623128 1.3029115863536644 1.002483821113773 1.0875541976518819 1.0 14.439778596212749 -8.797162093720889 24.01547795696486 1.0011727844078535 1.173714981865314 0.46553889641982305 0.0701583927156959 55.7587269877149 37484.88748882653 0.011260339991647633 0.011987820137644736 1.5952836210872771e-09 8.797162093720889 0.17254219745746058 RSNS(ph)PDKFK ddPTM_A549_PD325901_60min_R1 3 RSNSPDKFK 9 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 RS(0.002)NS(0.998)PDKFK;RS(0.222)NS(0.778)PDKFK;RS(0.185)NS(0.815)PDKFK 94.191 0.00031358 1381400000.0 20132.300000000003 20962.2 21265.2 19269.899999999998 23684.5 18435.5 19928.0 19820.9 20037.4 20179.6 20931.2 True False 22176.116275384065 22728.758160847305 22708.38435003572 20460.157957881802 22020.982427089297 18285.367400270552 20686.370945020022 19425.55660030476 19195.29775993549 18905.456612127928 18356.795093808956 1.2080603483373424 1.2381659241003808 1.2370560456762079 1.1145822488797203 1.1996093171250863 0.9961089235254091 1.1269053687915678 1.0582215741383014 1.0456780533770478 1.0298887423166811 1.0 14.164026580682973 -6.730632177151409 0.3851436750061298 1.0088549533234288 1.2925661811669351 0.7267443283442936 0.04692786121603338 0.7214857977362455 0.15023000465022962 0.013604438330453368 0.08074472032125679 1.8593785768302637e-07 6.730632177151409 0.28371122784350633 RSNS(ph)TTQVSQPR ddPTM_A549_MK2206_60min_R1 1 RSNSTTQVSQPR 12 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RS(0.182)NS(0.779)T(0.033)T(0.006)QVSQPR 57.328 0.006053 9102200.0 394.81 433.1 285.51 303.35 427.13 150.03 292.05 347.5 212.03 451.14 558.84 True False 461.4442758222435 455.14294008033164 325.9996111816948 377.67076361789896 364.29974281568957 165.90607501814608 345.1117046435682 396.7591891741173 164.00554354233435 349.2271606696624 420.0646048006314 1.098507873666841 1.0835070007775325 0.7760701745780718 0.8990778068462751 0.8672469392859019 0.3949537121721728 0.8215681604675145 0.9445194492462053 0.39042933317405715 0.8313653582772358 1.0 8.714467417327505 -5.745769426139162 0.913334079849154 0.7184805005055107 1.2035571756963603 0.2704527447961461 0.19442486511525656 1.3332237899448263 1.2931679645838423 0.03825215382809453 0.5401595786457685 1.795686732500837e-06 5.745769426139162 0.4850766751908496 RSNS(ph)TTQVSQPR ddPTM_A549_PD325901_60min_R1 2 RSNSTTQVSQPR 12 1 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 RS(0.416)NS(0.571)T(0.007)T(0.006)QVSQPR;RS(0.114)NS(0.871)T(0.012)T(0.002)QVSQPR 85.006 0.00018094 26202200.0 1130.34 1222.19 1176.96 1152.23 1389.71 1515.3400000000001 1124.46 1127.9 1449.39 1494.6899999999998 1975.3700000000001 True False 1245.0912846876715 1325.1882405761787 1256.8355832354289 1223.4006301958066 1292.1015638392305 1502.9995734493764 1167.251940628122 1105.403149679567 1388.4771786894955 1400.315018314608 1732.412012902145 0.7187039084322029 0.7649382656705416 0.7254830686205943 0.7061834142712736 0.7458396468139791 0.8675762822329685 0.673772712227235 0.6380717412757894 0.8014705326151091 0.8083036875095281 1.0 10.758566366159808 -10.022778355443899 0.7283777320447775 0.9912510549903872 0.7338376213840166 0.32204869682824666 0.0788206891122094 0.2494166558814069 0.2648595997608035 0.03177555511603694 0.013203876359568687 9.489026173681276e-11 10.022778355443899 -0.2574134336063706 RSNT(ph)LDIMDGR ddPTM_A549_MK2206_60min_R1 3 RSNTLDIMDGR 11 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 RS(0.161)NT(0.839)LDIMDGR;RS(0.283)NT(0.717)LDIMDGR;RS(0.13)NT(0.87)LDIMDGR 110.98 4.5396000000000004e-05 32896000.0 1646.9900000000002 1789.1399999999999 1461.3899999999999 1506.58 2263.28 1835.9599999999998 1569.9500000000003 1565.99 2495.1 2634.69 2371.7200000000003 True False 1924.9616469605069 1880.1995839651906 1668.6370767567398 1875.6921676329455 1930.3545101488862 2030.240068588384 1855.1895932380417 1787.9738781432407 1929.963833855956 2039.511699128326 1782.7564678579804 1.07976702464212 1.0546586804558282 0.935987111443013 1.052130339421306 1.082792038594171 1.1388207560552341 1.04062984860018 1.0029265973111454 1.0825728968886301 1.1440214835281695 1.0 10.799893922784868 -5.36387792225734 5.165067525607297 1.041412951041305 1.0786169998933848 0.0 0.05871829458025941 0.5616625278659945 21.02974365648891 0.00730640212236915 0.046266370241066265 4.326354253356353e-06 5.36387792225734 0.03720404885207973 RSNT(ph)LDIMDGR ddPTM_A549_PD325901_60min_R1 3 RSNTLDIMDGR 11 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 RS(0.365)NT(0.635)LDIMDGR;RS(0.143)NT(0.857)LDIMDGR;RS(0.008)NT(0.992)LDIMDGR 157.23 1.9695e-13 38153100.0 2891.3500000000004 2562.29 3097.7200000000003 2572.81 2938.04 2844.88 2540.93 3231.2 3277.6800000000003 3042.69 3773.2799999999997 True False 3184.8777235006282 2778.223170657537 3307.9499073036086 2731.7266304245422 2731.682206087756 2821.712240496958 2637.6264816002476 3166.7511811726367 3139.9305080392323 2850.574034131276 3309.190480792663 0.962434088332607 0.8395476739048454 0.9996251126986327 0.8254969444279924 0.8254835198950004 0.852689579785405 0.7970609419160565 0.9569564519036368 0.9488515473086677 0.8614112879499362 1.0 11.69226262188091 -8.432808699531417 7.353938073052098 0.9746960219109021 0.8711826442478032 0.14477943257574 0.06741231552872493 0.2026137660118929 14.572242839998863 0.009511348252023157 0.011492580128428513 3.691401636928848e-09 8.432808699531417 -0.10351337766309887 RSNVSSPATPTASSS(ph)SSTTPTRK ddPTM_A549_MK2206_60min_R1 1 RSNVSSPATPTASSSSSTTPTRK 23 2 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPT(0.081)AS(0.044)S(0.06)S(0.169)S(0.169)S(0.169)T(0.169)T(0.124)PT(0.016)RK 67.218 0.00010814 11168000.0 582.12 551.03 695.8 537.63 892.29 784.22 661.4 546.54 752.84 887.19 1016.8 True False 680.3676245324191 579.0750733605748 794.4749026661872 669.3493741351282 761.0353230094155 867.2056398768942 781.5678186997288 624.0137187085526 582.3229420384429 686.7731628197853 764.3004977476238 0.8901834115474829 0.7576536651056697 1.039479766148899 0.8757672880073814 0.9957278913884909 1.1346396377243368 1.0225923193861464 0.8164507553606295 0.7619031307117231 0.8985643275697062 1.0 9.577996159678342 -2.2458828469381507 18.237260270078526 0.9110892335265477 0.028874748783757287 0.0 0.1169917060060274 0.0 0.0 0.017467279502857414 0.0 0.0056769772399462865 2.2458828469381507 -0.8822144847427904 RSNVSSPATPTASSS(ph)SSTTPTRK ddPTM_A549_PD325901_60min_R1 1 RSNVSSPATPTASSSSSTTPTRK 23 2 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPTASS(0.055)S(0.199)S(0.199)S(0.199)T(0.199)T(0.136)PT(0.011)RK 109.71 3.123e-11 11496000.0 883.44 965.0 1168.6 801.81 991.03 859.38 836.78 1078.6 1148.3 1220.7 1129.9 True False 973.1261784458452 1046.323936667795 1247.908223362666 851.3359826573682 921.4234716678967 852.3814942065309 868.6241208035857 1057.0864768546683 1100.040944320816 1143.6247936740353 990.9294630262347 0.9820337519019574 1.0559015305412245 1.2593310320510955 0.8591287416739462 0.9298577810512656 0.8601838233807407 0.8765751279115909 1.0667625863362609 1.1101102403004164 1.1540930372394813 1.0 9.95263855600177 RSNVSSPATPTASSSSSTT(ph)PTRK ddPTM_A549_MK2206_60min_R1 1 RSNVSSPATPTASSSSSTTPTRK 23 2 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPT(0.001)AS(0.066)S(0.053)S(0.051)S(0.051)S(0.229)T(0.229)T(0.248)PT(0.072)RK 70.488 0.00010828 8311100.0 606.63 582.1 677.68 491.69 641.75 422.02 626.31 656.34 946.6 1063.3 1133.7 True False 709.0143133204523 611.7264036498755 773.7852141977899 612.154072072803 547.3494251210842 466.677876285796 740.1024199120461 749.3782049569501 732.1966114095824 823.0997915060776 852.1710014717552 0.8320094348387097 0.7178446609816385 0.9080163639239215 0.7183465184987201 0.6422999892929657 0.5476340728325803 0.8684905008898927 0.8793753878772275 0.859213244929751 0.9658857084840136 1.0 9.7349991486545 -9.09208309733356 0.6768221071536956 0.9734132146915337 0.7417139873124913 0.44847673227063434 0.09885922612329547 0.4202668284064355 0.4219258816366188 0.034167761150075596 0.027683736995527862 8.089411026455617e-10 9.09208309733356 -0.23169922737904247 RSNVSSPATPTASSSSSTT(ph)PTRK ddPTM_A549_PD325901_60min_R1 1 RSNVSSPATPTASSSSSTTPTRK 23 2 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPTAS(0.014)S(0.073)S(0.05)S(0.157)S(0.157)T(0.107)T(0.334)PT(0.107)RK 106.33 9.740200000000001e-11 13867000.0 1068.3 772.72 863.71 995.25 1067.2 1098.8 1125.5 1095.1 1042.8 1457.9 1365.2 True False 1176.753029559106 837.8398262610764 922.3265545101563 1056.7243321232527 992.2435536401321 1089.851737105979 1168.331518397232 1073.2573714106697 998.9747424346839 1365.8479451932296 1197.2890547158295 0.9828478970255035 0.6997807446422647 0.7703457664440654 0.8825975047220831 0.8287418562225444 0.9102661824338233 0.9758140808148702 0.8964062330507164 0.834363881052755 1.1407837896901236 1.0 10.225555780687777 -7.145058390603518 1.9399708144033787 0.9221008061014334 0.818096200729282 0.23313504393169726 0.10131880931869162 0.3920930627768671 2.8865927392941755 0.013254019748053443 0.02572865653444061 7.160471316813378e-08 7.145058390603518 -0.10400460537215139 RSPGT(ph)PRPPGASK ddPTM_A549_PD325901_60min_R1 1 RSPGTPRPPGASK 13 2 A0A2R8Y4Z8;Q9Y3X0;M0QYB4 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 RS(0.216)PGT(0.784)PRPPGASK 40.52 0.036677999999999995 9145100.0 1045.5 1383.5 1143.1 1714.8 1481.6 1531.7 1255.2 1120.3 1476.4 1259.1 1783.2 True False 1151.6383903435787 1500.0924003936727 1220.6776400187093 1820.7193014066363 1377.5375272425215 1519.226343033516 1302.9673228717945 1097.9547376416517 1414.3520423193002 1179.6002111206492 1563.8777046361465 0.7363992637848368 0.9592133681211894 0.7805454585099502 1.164233811895315 0.8808473470520004 0.9714483034892942 0.8331644597330865 0.7020719934728548 0.9043878802840052 0.7542790639087065 1.0 10.610911982848664 -10.150458853872076 1.126890547055186 0.988484525935424 0.887779477375309 0.0 0.14005947176046618 0.7516014199030586 1.9069179516900971 0.04246411620844613 0.021599280086141016 7.071981992051094e-11 10.150458853872076 -0.10070504856011497 RSPQQT(ph)VPYVVPLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RSPQQTVPYVVPLSPK 16 1 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 2 RS(0.377)PQQT(0.623)VPYVVPLS(1)PK 82.477 8.363299999999999e-05 2607500.0 1143.9 1412.4 1411.5 1280.7 1780.7 1606.1 1221.3 1268.1 2331.0 2227.3 2028.4 True False 1336.9623543300947 1484.2851271518373 1611.671924566432 1594.4715574928082 1518.7613888790254 1776.0564359571051 1443.1944012367383 1447.8570583933752 1803.0322218421052 1724.151383072968 1524.6922990079465 0.8768735535688087 0.9734981465556031 1.0570473305434016 1.0457661250930854 0.9961100937331551 1.1648622066975158 0.9465479704828079 0.9496060676212735 1.1825548164801927 1.1308192375568507 1.0 10.574302403740019 -4.059762955571576 0.7015739996967163 1.0688983397875038 5.305950657439973e-11 0.31082900124106805 0.07703414215418806 12.218614813303684 1.1751368074923496 0.014198228179789293 15.354737890092832 8.714391046791446e-05 4.059762955571576 -1.0688983397344443 RSPQQTVPYVVPLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 RSPQQTVPYVVPLSPK 16 1 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 RSPQQTVPYVVPLS(1)PK;RSPQQTVPYVVPLS(1)PK 88.396 5.2023e-06 35651000.0 4066.1 4017.6 4140.7 3445.7 5285.9 4102.7 4077.8 3656.4500000000003 6038.799999999999 5094.0 5542.5 True False 4752.3582733994235 4222.078679442946 4727.913523239268 4289.896654683352 4508.35111218939 4536.8449908481525 4818.683476101838 4174.7629849084915 4671.021441982024 3943.2618620633507 4166.144284781866 1.1407089981878173 1.0134259379506845 1.1348415225342623 1.0297042928526334 1.082139936597381 1.0889793249409017 1.1566290427586903 1.002068747392669 1.121185710980865 0.9465015113536364 1.0 12.024497089315414 -10.960621401336208 1.1472733326155822 0.9985844912511244 1.0864481202405545 0.3808703748870883 0.05260389703015824 0.4843841813674356 1.1025520130057413 0.03471996972775952 0.007526539152561906 1.0949104447049355e-11 10.960621401336208 0.08786362898943012 RSPQQTVPYVVPLS(ph)PK ddPTM_A549_PD325901_60min_R1 3 RSPQQTVPYVVPLSPK 16 1 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 RSPQQTVPYVVPLS(1)PK;RSPQQTVPYVVPLS(1)PK;RSPQQTVPY(0.011)VVPLS(0.989)PK 143.72 1.1198000000000001e-14 106269200.0 12830.900000000001 13086.7 13612.599999999999 13942.5 14480.499999999998 14230.3 13392.3 14799.400000000001 17391.9 15211.7 15938.399999999998 True False 14133.483522390661 14189.562136777648 14536.43289521361 14803.696559285054 13463.439635013045 14114.41315484092 13901.95130504776 14504.214357095303 16660.978924961426 14251.23066595504 13978.07784184205 1.01111781478877 1.0151297122056753 1.0399450525093068 1.0590652539486933 0.9631824766858512 1.0097535093552537 0.994553862293826 1.0376401191355733 1.1919363387066257 1.0195415154503813 1.0 13.770878365534584 -8.537489480765352 24.948167266703607 1.0919077451345192 1.0141968829159265 0.15878448980443638 0.051684511135968884 273.18902218079563 466474.51064818783 0.011863328855497967 0.013454449284170934 2.900751458199034e-09 8.537489480765352 -0.07771086221859269 RSPS(ph)APVCK ddPTM_A549_PD325901_60min_R1 2 RSPSAPVCK 9 1 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 RS(0.372)PS(0.628)APVCK;RS(0.168)PS(0.832)APVCK 68.536 0.0018477999999999997 10871000.0 3921.5 3887.3 4563.0 4678.3 4065.9 4375.3 4175.0 4577.4 3677.7 4178.5 4862.7 True False 4319.607793144281 4214.896413480537 4872.672619548045 4967.267965809813 3780.325210593525 4339.6690074260905 4333.881909647662 4486.100166099165 3523.1390585462564 3914.6687968927263 4264.618727195036 1.012894251389599 0.9883407364420589 1.1425810679101305 1.164762498962464 0.8864391994732798 1.0175983563905648 1.0162413540068522 1.0519346401336571 0.8261322486063198 0.9179410979765401 1.0 12.058201049658656 -8.735082914450436 24.97705605446244 0.9178957691671239 1.035278011108384 0.31333941755939965 0.07934469906364398 225.05819480768096 213279.3123600345 0.015689021157015443 0.017787047716990616 1.840420599283077e-09 8.735082914450436 0.11738224194126001 RSPS(ph)PEEK ddPTM_A549_MK2206_60min_R1 3 RSPSPEEK 8 1 P25686 P25686 DNAJB2 DnaJ homolog subfamily B member 2 1 RS(0.003)PS(0.997)PEEK;RS(0.013)PS(0.987)PEEK;RS(0.03)PS(0.97)PEEK 58.37 0.011634 20572300.0 3596.6000000000004 3975.5 2860.3 1992.4499999999998 1626.23 1251.34 1190.26 1421.41 1691.52 5849.9 5235.8 True False 4203.6181515723565 4177.835969266585 3265.9335500087623 2480.6003394444792 1387.0137212538539 1383.7559682277333 1406.5148350250074 1622.8992203855591 1308.3934208023838 4528.403527068 3935.606359271252 1.0680992375341958 1.0615482311701991 0.8298425329848049 0.6302968622867574 0.35242694381423967 0.35159917987426986 0.3573819906331915 0.41236319698550034 0.3324502761106058 1.1506241005023974 1.0 11.942370213691053 -2.5791174693379184 12.037744824655014 0.6495623131588979 0.9649245571701366 0.0 0.32626138687133843 0.0 0.0 0.04589356795791185 0.0 0.0026356183990470555 2.5791174693379184 0.3153622440112387 RSPS(ph)PEEK ddPTM_A549_PD325901_60min_R1 4 RSPSPEEK 8 1 P25686 P25686 DNAJB2 DnaJ homolog subfamily B member 2 1 RS(0.088)PS(0.912)PEEK;RS(0.017)PS(0.983)PEEK;RS(0.053)PS(0.947)PEEK;RS(0.001)PS(0.999)PEEK 102.05 0.001807 149186000.0 12206.7 11936.7 11549.4 10991.7 12479.8 12249.7 10067.5 10928.8 11859.400000000001 14074.300000000001 16059.2 True False 13445.915197902406 12942.647600852293 12333.211736184134 11670.632345038097 11603.261900972746 12149.942504575094 10450.624221647391 10710.816510522254 11360.990660174415 13185.646296064931 14084.020207656355 0.9546929782586465 0.9189597437396754 0.8756883016597459 0.8286435387740858 0.823860071903687 0.8626757364328506 0.7420199678474064 0.7604942589261297 0.806658219220557 0.936213247471553 1.0 13.781771581833643 -10.74831397182232 1.0457511093905159 0.9982390081119623 0.8383776345557883 0.37101512970025996 0.061818925081239366 0.37099859129617346 0.7327943706379071 0.04240626333099379 0.011347515119101785 1.7851965060525163e-11 10.74831397182232 -0.15986137355617402 RSPS(ph)PLGTSVR ddPTM_A549_MK2206_60min_R1 3 RSPSPLGTSVR 11 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 RS(0.049)PS(0.951)PLGTSVR;RS(0.019)PS(0.969)PLGT(0.005)S(0.007)VR;RS(0.286)PS(0.714)PLGTSVR 103.14 9.1045e-05 79020800.0 3751.2699999999995 3731.06 3528.2200000000003 3544.6400000000003 4220.4 3833.05 3427.29 3145.65 5198.0 5279.2 5436.58 True False 4384.3926662539125 3920.95501735424 4028.574649446532 4413.0769591249355 3599.584750730073 4238.660806827335 4049.9842294396644 3591.555520649098 4020.661299500324 4086.6250534363653 4086.527144025151 1.072889647304623 0.9594834144407945 0.9858186444048584 1.0799088819408011 0.880842001990118 1.0372281052934194 0.9910577090772748 0.8788771967170845 0.9838821957609829 1.0000239590752156 1.0 11.996659602051317 -5.250799425174485 23.655315606974913 0.9844259365889514 1.0728897554156913 0.1800602486476136 0.056350708915703936 917.6097083698394 2039991.5656344013 0.006983013167073868 0.1330511345333934 5.6130715061224524e-06 5.250799425174485 0.08846381882673993 RSPS(ph)PLGTSVR ddPTM_A549_PD325901_60min_R1 2 RSPSPLGTSVR 11 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 RS(0.024)PS(0.976)PLGTSVR;RS(0.106)PS(0.894)PLGTSVR 154.72 1.6564000000000001e-13 207102000.0 2878.1 3172.3 3169.7 3115.5 3733.5 2841.3 2897.3 3223.2 3325.9 3913.7000000000003 3467.7 True False 3170.2825932547644 3439.64085418782 3384.814902954511 3307.937359186127 3471.271839875778 2818.1613948300114 3007.558336963395 3158.9107474485145 3186.123989128803 3666.588314083778 3041.1948835614417 1.0424463786885476 1.131016257057414 1.1129884905602194 1.0877097607478257 1.1414170984697591 0.9266625463770861 0.9889396938092123 1.0387071096704001 1.0476553167805016 1.20564069534076 1.0 11.570422553690774 -7.238194937461064 24.999332676783435 1.0155910480359611 1.1043582487555383 0.16751022559202733 0.06928973496293363 480.00129114596274 516240.2797064124 0.005926472170573889 0.010261462771297154 5.778366213880938e-08 7.238194937461064 0.08876720071957722 RSPS(ph)PTPTPGPSR ddPTM_A549_PD325901_60min_R1 1 RSPSPTPTPGPSR 13 1 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 1 RS(0.115)PS(0.642)PT(0.102)PT(0.141)PGPSR 48.848 0.013222 10412000.0 2400.7 2239.6 2177.0 1755.4 2217.8 2241.7 2085.6 1912.7 2313.1 2660.9 2816.8 True False 2644.4172966980664 2428.338951876883 2324.7443113644736 1863.827071197346 2062.0293789946436 2223.4443384332667 2164.968649284112 1874.5496980158773 2215.888451021929 2492.890319887964 2470.351457166385 1.0704619737514367 0.9829933084348685 0.9410581254017475 0.7544785037734054 0.8347109367830167 0.9000518254125941 0.876380825490895 0.7588190306192619 0.896993196896632 1.0091237474150467 1.0 11.270500593452043 -10.296673799082843 1.0060418190231122 0.9919865547210673 0.8873136878186892 0.19530355489097506 0.08724713474122943 0.6601717584336512 1.3115644256161922 0.04021916170444724 0.01689268530917141 5.0504049376406306e-11 10.296673799082843 -0.10467286690237809 RSPS(ph)PY(ph)YSR ddPTM_A549_MK2206_60min_R1 1 RSPSPYYSR 9 1 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RS(0.518)PS(0.8)PY(0.644)Y(0.008)S(0.029)R 71.896 0.0014782999999999999 102650000.0 3723.0 3664.6 2791.4 2829.8 4538.3 3333.4 3249.3 3494.0 4632.3 5201.0 4269.0 True False 4351.351381389057 3851.11248722785 3187.262493967228 3523.101127034548 3870.722081849659 3686.138175468161 3839.6557503795443 3989.2851999262325 3583.0914462630535 4026.0904877486255 3208.8894815938284 1.356030304673434 1.2001387113260862 0.9932602890343676 1.097919123498343 1.2062497334520552 1.148727058570209 1.1965683992558134 1.2431980667482472 1.1166141641261393 1.2546678565411047 1.0 11.647858386808384 -9.811684624924812 0.8454936054103354 1.0133460608751046 1.1711027359529274 0.0 0.1127325654082013 0.4551996817866186 0.6756813355195911 0.033878060285833365 0.018521820903278537 1.5428204084133726e-10 9.811684624924812 0.15775667507782276 RSPS(ph)SEDDRDER ddPTM_A549_PD325901_60min_R1 1 RSPSSEDDRDER 12 2 Q9BVA0 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 1 RS(0.265)PS(0.367)S(0.367)EDDRDER 56.599 0.0052582 9481700.0 917.19 838.29 592.78 587.87 496.26 634.81 492.53 677.96 570.15 616.01 761.58 True False 1010.3024536004087 908.9356402790107 633.0096154757151 624.1813947503613 461.4044096040589 629.6403178305848 511.2734986727572 664.4375559506692 546.1885782500334 577.1150234710757 667.9104880533857 1.5126315152572598 1.360864451953867 0.9477461827566316 0.9345285123003949 0.6908177335990254 0.9427016480391874 0.7654820635664152 0.994800303087262 0.8177571516235523 0.8640604299433418 1.0 9.383510958500214 -5.70674990108441 2.7920485851239873 0.8948919831343068 1.4974782586591964 0.8487836418462817 0.09104928526793282 0.07739762070550495 1.1653005712778683 0.013606121036610295 0.0685309189828682 1.9644912506584303e-06 5.70674990108441 0.6025862755248895 RSPSPT(ph)PTPGPSR ddPTM_A549_PD325901_60min_R1 1 RSPSPTPTPGPSR 13 1 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 1 RS(0.327)PS(0.327)PT(0.345)PT(0.001)PGPSR 52.254 0.015103 9735200.0 2083.3 2073.2 1946.9 1874.8 2306.9 1541.2 1834.8 2028.5 2355.1 2462.7 2457.5 True False 2294.7950823555975 2247.915839896033 2079.0283416607685 1990.6021380202703 2144.8713023729583 1528.6489781832308 1904.6243180410859 1988.0399761725357 2256.1233370808623 2307.20470171299 2155.243079376026 1.064750006305541 1.042998751002526 0.9646375211944433 0.9236091079789378 0.995187653261798 0.7092698697474982 0.8837167075337518 0.9224203038610856 1.0468069048313764 1.0705078808933974 1.0 11.073634877704217 -8.756442403475255 24.981242766920733 1.022103262022205 0.934639639668907 0.18996527171328104 0.09062100917556484 173.19789321249965 865863.0543583621 0.016069981228393912 0.017944599625882067 1.7520947831868404e-09 8.756442403475255 -0.08746362235329808 RSPT(ph)DSDVSLDSEDSGAK ddPTM_A549_MK2206_60min_R1 2 RSPTDSDVSLDSEDSGAK 18 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 RS(0.131)PT(0.815)DS(0.053)DVSLDSEDSGAK;RS(0.254)PT(0.7)DS(0.046)DVSLDSEDSGAK 212.04 1.131e-55 69271000.0 5592.700000000001 6810.1 6877.299999999999 6707.1 8261.2 7015.700000000001 5932.0 6118.0 8706.6 9973.3 9180.4 True False 6536.611031612832 7156.7050017110705 7852.6045531850705 8350.33980109316 7045.988423545465 7758.096717355242 7009.767614948281 6985.245235589207 6734.569001583212 7720.324603242326 6900.653313849614 0.9472452439385487 1.0371054270104485 1.1379508861030432 1.2100795999031024 1.0210610652478604 1.1242553950340815 1.0158121696795974 1.012258538125632 0.9759320886425246 1.1187816938647868 1.0 12.752517239021417 -7.926801619509057 5.120213371198019 0.9910378252722092 1.0834619208683707 0.04742912349467088 0.07532243146114963 0.19359638214505762 9.398131572829481 0.010243251043241855 0.014217373385729575 1.1835820783081096e-08 7.926801619509057 0.09242409559616149 RSPT(ph)DSDVSLDSEDSGAK ddPTM_A549_PD325901_60min_R1 2 RSPTDSDVSLDSEDSGAK 18 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 RS(0.329)PT(0.613)DS(0.057)DVSLDSEDSGAK;RS(0.018)PT(0.981)DSDVSLDSEDSGAK 261.65 2.363099999999999e-100 100817000.0 15185.099999999999 14264.0 13039.0 14227.3 16412.1 15109.1 12992.3 15422.2 15956.1 15858.9 16622.4 True False 16726.680173320216 15466.077339512345 13923.904949876598 15106.088008457322 15259.370714671284 14986.056499006138 13486.729086159356 15114.592122518146 15285.520605832424 14857.566347503192 14577.950178075309 1.1473958937297313 1.0609226366250548 0.955134623166543 1.0362285385757672 1.046743234012475 1.0279947671617513 0.9251457798533905 1.0368118931597068 1.0485370315520268 1.0191807603958214 1.0 13.831500254507297 -5.373481646805726 3.524188031684884 1.0169782852456217 1.150001545544559 0.5269776637103445 0.03767419433701582 0.1546385836805616 3.069477178192809 0.005219290832333333 0.043977911894270263 4.2317339255810746e-06 5.373481646805726 0.13302326029893718 RSPT(ph)SSPTPQR ddPTM_A549_PD325901_60min_R1 2 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.023)PT(0.44)S(0.265)S(0.265)PT(0.007)PQR;RS(0.02)PT(0.326)S(0.326)S(0.326)PT(0.002)PQR 67.385 0.01431 10196900.0 596.8299999999999 543.6700000000001 603.55 773.27 1189.95 791.6199999999999 692.15 770.08 938.89 820.37 939.2900000000001 True False 657.4197422369762 589.4869789100308 644.5105324409864 821.0331316764104 1106.3720171046427 785.1733091807746 718.4901470090133 754.7201502839268 899.4317183779251 768.5716981947801 823.7632846498914 0.7980687589352649 0.7156023943948525 0.7823977402864107 0.9966857554538362 1.3430703185258654 0.9531540477850771 0.8722046252818607 0.9161857105645238 1.0918570117630257 0.9330006720576672 1.0 9.68608601610965 -6.27068606484869 4.6432818959334154 1.0361141216223544 0.7569709134934071 0.44837198575732595 0.12115620227621586 0.11936127607197423 7.132695618617992 0.0168701255306425 0.04298353429947162 5.361841047895374e-07 6.27068606484869 -0.27914320812894733 RSPTS(ph)SPTPQR ddPTM_A549_PD325901_60min_R1 1 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.136)PT(0.136)S(0.346)S(0.346)PT(0.035)PQR 65.12 0.0024449000000000003 38601000.0 1540.8 2061.0 1781.4 1865.4 2212.8 1906.5 1882.4 1836.9 2310.2 2536.1 2514.5 True False 1697.2208817229905 2234.6877030801284 1902.2965164284199 1980.6215213692196 2057.3805617455796 1890.97409609806 1954.0357620888037 1800.261588479827 2213.1103279369045 2375.9702131864674 2205.232440728797 0.7696335544393152 1.013356987593379 0.8626285743373786 0.8981463744087917 0.9329540613259097 0.8574942310721317 0.8860906115833411 0.8163591081060221 1.0035723613813263 1.0774239346856533 1.0 11.106715014555059 -8.784364456156066 24.922640394780146 1.0016869750440478 0.8853553820270759 0.5068584535284895 0.06324660854779504 133.16878729801346 144771.68863757417 0.00923136036491498 0.009830688683423336 1.6429923596070279e-09 8.784364456156066 -0.11633159301697193 RSPTSS(ph)PTPQR ddPTM_A549_MK2206_60min_R1 1 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.001)PT(0.002)S(0.221)S(0.737)PT(0.039)PQR 79.885 0.00038633 14109000.0 2109.1 2206.0 2322.6 1462.6 1078.2 1094.3 792.92 678.38 1473.9 3508.9 3333.9 True False 2465.0645174557226 2318.275977412171 2651.9796046744586 1820.937065658609 919.5982082829037 1210.0980996624498 936.9833002772743 774.5424424516186 1140.0640033346533 2716.237052963113 2506.000619040914 0.9836647679676718 0.9250899460269933 1.058251775567962 0.7266307325795914 0.3669584920672719 0.4828802077972245 0.3738958774223578 0.309075120160205 0.4549336479298133 1.0838932090937232 1.0 11.291171055701408 -3.5537471727996732 13.111512657358933 0.692807773309404 0.9597326222815205 0.0 0.2979243307666791 0.0 0.0 0.04248823853192331 0.0 0.0002794170011084383 3.5537471727996732 0.26692484897211644 RSPTSS(ph)PTPQR ddPTM_A549_PD325901_60min_R1 1 RSPTSSPTPQR 11 1 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.006)PT(0.006)S(0.272)S(0.666)PT(0.05)PQR 57.266999999999996 0.005679999999999999 36388000.0 2310.8 2402.4 1941.8 1821.1 2535.8 1960.1 1692.0 2307.5 2004.7 2790.2 2754.3 True False 2545.3907148789517 2604.858679223533 2073.5822249919775 1933.5852109818209 2357.6941560350892 1944.1375954690834 1756.3899858979266 2261.4751023012705 1920.4494305320384 2614.0262958214885 2415.5385609462437 1.053757019669287 1.0783759453639714 0.8584347435048559 0.8004778902077944 0.9760532057544571 0.8048464333798515 0.727121485160598 0.9362198305852664 0.7950398563621923 1.082171213527426 1.0 11.238129168374686 -5.759495557860706 24.997060876843324 0.8810816128988452 1.0660665492583614 0.3207600684395766 0.10039469581188948 39.60709118320155 509295.22872224683 0.013159345503999399 0.046316087519180815 1.7398204935336837e-06 5.759495557860706 0.18498493635951618 RSPTSSAIPLQS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RSPTSSAIPLQSPR 14 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RSPTSSAIPLQS(1)PR 127.61 5.188199999999999e-09 15760000.0 1685.6 1604.3 1794.2 1969.4 2942.6 2466.4 2515.9 2183.2 2771.3 2685.8 3381.7 True False 1970.0880710366353 1685.9520174806655 2048.6445391832053 2451.903088409726 2509.7474380386493 2727.3928109361827 2973.0064636629104 2492.675285769589 2143.6049748567257 2079.0759146308887 2541.9305598280275 0.7750361485759548 0.6632565201130937 0.8059404027629319 0.9645830327385527 0.987339102689117 1.072961179207312 1.1695860267182308 0.9806228876441965 0.843298006929721 0.81791215994962 1.0 11.311708904163064 -6.11781133399305 3.242758635806895 0.9629338012206539 0.7201798248913813 0.5448245235785033 0.09506309485313255 0.16563563206960336 3.2528666163033835 0.014771709159262465 0.04473586646909538 7.624101439550174e-07 6.11781133399305 -0.24275397632927254 RSPTSSAIPLQS(ph)PR ddPTM_A549_PD325901_60min_R1 2 RSPTSSAIPLQSPR 14 1 Q9ULD2;Q9ULD2-7;Q9ULD2-6;Q9ULD2-4;Q9ULD2-3;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RSPTSSAIPLQS(1)PR;RSPTSSAIPLQS(1)PR 106.58 7.9533e-06 51834000.0 5162.5 5056.7 4951.7 4727.9 6005.8 5444.9 4944.4 5205.5 5878.7 5442.5 5645.1 True False 5686.593199568365 5482.8458554901945 5287.752138991026 5019.93164516004 5583.973326885213 5400.55853965084 5132.561847679499 5101.672218864252 5631.638682729932 5098.859621177138 4950.788487237276 1.1486237423044698 1.1074692182113048 1.0680626232816075 1.0139660900684828 1.12789575666184 1.0908481656150397 1.0367160424871351 1.0304767072994416 1.1375235878583445 1.0299085962410992 1.0 12.273442598952625 -11.055026469002907 1.3527273875164978 0.9998732441694596 1.0878955659495502 0.2696619651860699 0.04327833111128038 0.40732909006192064 1.3262547876051685 0.03260637756553108 0.007205666278486376 8.809951772427924e-12 11.055026469002907 0.08802232178009062 RSQGS(ph)SQFR ddPTM_A549_MK2206_60min_R1 1 RSQGSSQFR 9 1 Q15172 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform 1 RS(0.005)QGS(0.886)S(0.109)QFR 66.267 0.0022776999999999997 6612800.0 1013.9 1143.6 853.69 810.15 991.17 840.62 759.73 699.71 1427.6 1423.7 1464.9 True False 1185.0215325249433 1201.8043552894644 974.7560788403247 1008.636786369016 845.3702059949599 929.5738504416046 897.7631068955928 798.896035272004 1104.2508794087462 1102.085181197408 1101.1249008167715 1.076191748679864 1.0914332737348986 0.8852366140455897 0.9160057915508482 0.7677332565705282 0.8442038226109344 0.8153145081267957 0.7255271719669714 1.0028388955600367 1.0008720903322812 1.0 10.104762408032002 -5.75183416740601 24.689972409629295 0.9330324694011021 1.083812614389951 0.2867712772388623 0.09944420364915245 217.2183156282521 558339.8824445815 0.016578713901037354 0.06253976505320871 1.7707849922600597e-06 5.75183416740601 0.15078014498884884 RSQGS(ph)SQFR ddPTM_A549_PD325901_60min_R1 2 RSQGSSQFR 9 1 Q15172 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform 1 RS(0.057)QGS(0.831)S(0.113)QFR;RS(0.046)QGS(0.911)S(0.043)QFR 60.157 0.0034352 12866300.0 3972.0 3833.1 3849.1000000000004 3428.1000000000004 3724.4 3445.1 3771.6 3471.5 3843.6 4097.7 4293.5 True False 4375.2345159681445 4156.12878926562 4110.3230725185995 3639.8459512200184 3462.8109924824853 3417.0442478192645 3915.13030189871 3402.2582091609324 3682.0668584790465 3838.9705226821434 3765.426718738951 1.1619491873774719 1.103760370260908 1.0915955559733095 0.9666489944170286 0.9196330857401968 0.9074786214306249 1.0397574018410043 0.9035518317829209 0.9778617759721475 1.0195313332157536 1.0 11.878597652912338 -6.135734420676435 3.08267326045829 0.974584148541004 1.1288645208273431 0.7036144281415763 0.044198991052225994 0.11111779399928398 1.9941152999022664 0.00612266572658645 0.018624484148827416 7.3158632565296e-07 6.135734420676435 0.15428037228633917 RSQS(ph)FNSIDK ddPTM_A549_MK2206_60min_R1 1 RSQSFNSIDK 10 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 RS(0.459)QS(0.541)FNSIDK 89.26 0.00028717 6854300.0 1857.2 2193.3 2095.1 1726.0 2343.9 1662.9 1800.4 1691.2 2953.0 2490.4 2812.6 True False 2170.649955819435 2304.9296016582557 2392.216683782596 2148.870077483085 1999.1154149455547 1838.8669742563152 2127.509375244924 1930.9327790827824 2284.150214972002 1927.8169103420826 2114.1537961889903 1.026722823917676 1.0902374301307507 1.1315244369141197 1.0164208873340599 0.9455865597617327 0.8697886490429827 1.0063172220866847 0.9133360035412347 1.0804087285841975 0.9118621898828734 1.0 11.045864615464279 -6.390638239391879 7.449003513604637 1.0075317559102825 1.08326678737191 0.2396908110539796 0.06861764688258219 0.3534586673195147 19.795601910574177 0.010261165021768963 0.023935259062322297 4.067820312396895e-07 6.390638239391879 0.07573503146162741 RSQS(ph)FNSIDK ddPTM_A549_PD325901_60min_R1 2 RSQSFNSIDK 10 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 RS(0.192)QS(0.808)FNSIDK;RS(0.006)QS(0.994)FNSIDK 120.9 1.9988e-05 20203100.0 5781.4 6066.9 6130.0 5847.4 6896.799999999999 5642.799999999999 6274.9 6826.4 5730.6 7010.2 7152.3 True False 6368.323471958266 6578.178954787399 6546.018662684526 6208.58061759107 6412.392560668345 5596.846907664379 6513.694753257033 6690.242096792794 5489.762810698307 6567.574775631785 6272.61244216527 1.0152585594400212 1.0487143937935768 1.0435872968464281 0.9897918410925932 1.0222841949493733 0.8922672904261847 1.0384341155004537 1.0665798594251041 0.875195600129134 1.0470238415311206 1.0 12.614850712122003 -6.97578983496131 0.6376974402440211 0.9504045584525643 1.0429628444923775 0.0 0.06365258079089008 1.1149088621349914 0.8040194963291798 0.013178765386310777 0.050436200250610554 1.0573290511552448e-07 6.97578983496131 0.0925582860398132 RSQS(ph)FSK ddPTM_A549_MK2206_60min_R1 2 RSQSFSK 7 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 RSQS(0.792)FS(0.208)K;RS(0.003)QS(0.997)FSK 89.08 0.005312699999999999 21147900.0 4332.200000000001 4492.0 3810.7 3454.1 5743.5 4926.6 3955.6 4406.5 5963.700000000001 6148.9 6086.6 True False 5063.36944787904 4720.623613116716 4351.114561066456 4300.354655060439 4898.6387583684445 5447.929541987595 4674.281317884259 5031.134869340279 4612.9314720719685 4759.8592194034845 4575.129238385806 1.1067161568676243 1.0318011507762879 0.9510364263724304 0.9399416783639727 1.0707104658964297 1.1907706335984793 1.0216719734748816 1.0996705463811904 1.0082625499120326 1.040376997324529 1.0 12.159596781926489 -4.397585584935225 12.915460174091965 1.0248718510050066 1.0352231288759646 0.0 0.07120703863946329 436470.19631005684 0.027236020864039874 0.009661298584945285 1854107.5719939393 4.0032656956228024e-05 4.397585584935225 0.01035127787095802 RSQS(ph)FSK ddPTM_A549_PD325901_60min_R1 2 RSQSFSK 7 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 RS(0.009)QS(0.989)FS(0.001)K;RSQS(0.74)FS(0.26)K 94.804 0.0050089 30733000.0 5481.200000000001 5552.5 6056.8 5256.8 6242.6 5963.6 5720.1 6127.5 6386.200000000001 6180.5 7528.0 True False 6037.64738895383 6020.428661500444 6467.850870497172 5581.500596940985 5804.141311800866 5915.034418825276 5937.781535658823 6005.282205569245 6117.810222608724 5790.262175229272 6602.103723923794 0.9145035645343522 0.9118954977463386 0.9796651402279345 0.8454124367533808 0.879135129423765 0.8959317614764502 0.8993771961113407 0.9096013114438252 0.926645578202573 0.877032900020537 1.0 12.688710089204811 -10.053937314059569 0.625949479230691 1.0000153044643423 0.9031482577105866 0.0 0.046797369279674296 0.4269021302933434 0.32584607629152595 0.019946862325449552 0.007144181871086238 8.832073731165067e-11 10.053937314059569 -0.09686704675375568 RSQS(ph)IEQESQEK ddPTM_A549_MK2206_60min_R1 1 RSQSIEQESQEK 12 1 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 RS(0.147)QS(0.853)IEQESQEK 74.76899999999999 0.0010431 2891600.0 581.85 891.32 932.71 807.71 1094.1 733.26 581.42 772.2 1187.9 1213.6 1361.5 True False 680.0520551332853 936.6843808644682 1064.98230305516 1005.5989862594794 933.1593393455057 810.8530865014051 687.0564879776182 881.6617147633187 918.8425466865017 939.4469171181947 1023.401974511595 0.6645014100718646 0.9152653641414835 1.0406295176080822 0.9826041099240483 0.9118209292012004 0.7923114345058538 0.6713456736347483 0.8615008928276497 0.8978315164234534 0.9179647299063824 1.0 9.999157206604542 -9.920626863885483 0.9653113528484629 0.9865584776239172 0.8647570497679269 0.09469880574624734 0.11210341108382753 0.6875886613315622 1.306193460335698 0.04190786092129053 0.022957525088182332 1.2005303290015302e-10 9.920626863885483 -0.12180142785599035 RSQS(ph)LPTTLLSPVR ddPTM_A549_PD325901_60min_R1 1 RSQSLPTTLLSPVR 14 1 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 RS(0.373)QS(0.627)LPTTLLSPVR 90.385 2.8891999999999997e-05 5053000.0 388.77 447.32 446.78 361.18 571.21 623.08 462.81 517.21 456.33 532.59 664.52 True False 428.23764420265235 485.01722626967637 477.1011775063938 383.48926830070496 531.090180167522 618.0058430615155 480.4224878093498 506.8938408066043 437.1520370303215 498.96217650762225 582.7882527393518 0.7348082981936473 0.8322357631436286 0.8186527014980416 0.6580250485457503 0.9112918417129602 1.0604294787285538 0.8243517015848559 0.8697736071789168 0.7501044075194062 0.8561637510061133 1.0 9.186827987071647 -6.795791581354406 24.998621738834384 0.8894995222206721 0.7701465494806375 0.34466836356303165 0.0889871889700641 218.86575575856065 159271.39460684967 0.01608717361372952 0.030402939000173296 1.6003258434012416e-07 6.795791581354406 -0.11935297274003454 RSQS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 RSQSPVK 7 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RS(0.019)QS(0.981)PVK 53.47 0.018746000000000002 35538000.0 6345.3 5855.8 4884.2 5198.2 5713.6 5380.3 3813.1 4170.4 5532.1 6906.4 7788.5 True False 6989.4701848370305 6349.288816931884 5215.671183080551 5519.281008031242 5312.2964468499395 5336.484620632781 3958.2096071083815 4087.2181003844917 5299.605075395965 6470.328725346405 6830.563875369355 1.0232640104634236 0.9295409475383251 0.7635784216714494 0.8080271422295708 0.7777244373639187 0.781265605300297 0.5794850438894908 0.5983719902133966 0.7758664104593261 0.9472612866820647 1.0 12.737788965171621 -4.337819924932483 19.96699084876104 0.8380494378310507 0.8095368524700224 0.0 0.1421614575638506 0.0 0.0 0.021374257107795336 0.0 4.593884533380024e-05 4.337819924932483 -0.028512585361028298 RSQS(ph)SSQFR ddPTM_A549_MK2206_60min_R1 1 RSQSSSQFR 9 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 RS(0.254)QS(0.538)S(0.104)S(0.104)QFR 42.802 0.031074 7865100.0 930.02 1002.6 880.48 692.63 767.39 513.97 562.79 525.41 889.88 1211.0 1330.8 True False 1086.9846391940503 1053.6280575491583 1005.3453036785351 862.3243810933427 654.5079475553863 568.3579642543258 665.0416581282437 599.8884765006411 688.3236008463541 937.4342589239733 1000.3256317884908 1.0866307976639777 1.0532850744465756 1.005018037857402 0.8620436722705841 0.6542948883406955 0.5681729490807446 0.6648251699191293 0.599693197332248 0.6880995337645147 0.9371290998991264 1.0 9.966253995556249 -6.2773465773051775 2.783063642448609 0.7819159107224146 1.0609948691265843 0.5045451792052766 0.1321331037886492 0.25496593189289696 3.9128417292370337 0.024773283922223093 0.07000467530762527 5.280237081441212e-07 6.2773465773051775 0.27907895840416963 RSQS(ph)SSQFR ddPTM_A549_PD325901_60min_R1 2 RSQSSSQFR 9 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 RS(0.002)QS(0.628)S(0.291)S(0.08)QFR;RS(0.289)QS(0.635)S(0.052)S(0.024)QFR 89.805 0.00045162 13026700.0 1987.8899999999999 2147.83 1459.4299999999998 2064.66 2291.8999999999996 1990.4299999999998 1743.2199999999998 2232.8 2544.6000000000004 2141.9300000000003 2621.8 True False 2189.699129392728 2328.835171910042 1558.4756960655277 2192.189359016927 2130.9248506257654 1974.2205980049637 1809.5591910265864 2188.2650524022856 2437.6593110848644 2006.6881742559385 2299.335220959539 0.9523183524666496 1.0128297738762042 0.6777940344927861 0.9534013740293601 0.9267569300906485 0.8586049480776007 0.7869923334934331 0.9516946604632522 1.0601582965652137 0.872725366864308 1.0 11.167001097112493 -8.536338106940102 5.917633177475773 1.0276891336847027 0.8811128062394069 0.11272611892378359 0.09831247540688744 0.1255109509440445 15.832736138500113 0.014291604085302832 0.016488966652687505 2.908451948429851e-09 8.536338106940102 -0.1465763274452958 RSQS(ph)TTFNPDDMSEPEFK ddPTM_A549_MK2206_60min_R1 2 RSQSTTFNPDDMSEPEFK 18 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 RS(0.151)QS(0.662)T(0.151)T(0.035)FNPDDMSEPEFK;RS(0.147)QS(0.669)T(0.147)T(0.036)FNPDDMSEPEFK 168.84 1.4021e-30 17585600.0 5300.2 5948.7 5691.2 4664.4 7171.1 6505.9 5625.0 5536.4 9244.0 9127.400000000001 9234.7 True False 6194.744182551243 6251.463421047952 6498.297737933036 5807.178209392876 6116.240689498726 7194.350019733093 6646.989688820644 6321.201654513902 7150.248759634673 7065.514000745394 6941.469125245846 0.8924255183994417 0.9005965896054524 0.9361559665084422 0.836592096660403 0.881116169955176 1.0364304572885774 0.9575767850995415 0.9106431996540825 1.0300771537871578 1.0178701184520726 1.0 12.761025318560774 -7.633385754674206 0.778960436043583 1.0111912871117714 0.8889443195248142 0.4832970189281868 0.04644190436822834 0.36413159717430477 0.4441228047100787 0.009421630264782736 0.018862550932757863 2.3260242883815415e-08 7.633385754674206 -0.12224696758695719 RSQS(ph)VTR ddPTM_A549_PD325901_60min_R1 1 RSQSVTR 7 1 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 RS(0.137)QS(0.862)VT(0.001)R 51.268 0.020984 15739000.0 414.29 284.12 402.53 275.63 152.3 249.92 232.06 249.5 219.63 354.33 511.8 True False 456.3484158158214 308.06378951922665 429.8481064095276 292.6550390988518 141.6029734064768 247.88473438071185 240.89117028810458 244.5235267710364 210.39971488389872 331.95754332966396 448.8518445675076 1.0167016607797104 0.6863373588584945 0.9576614457799741 0.6520081016506467 0.3154782031539131 0.5522640429818482 0.5366830351788259 0.5447755862664387 0.4687509195525974 0.7395704113670794 1.0 8.810095513628358 -4.835592080035246 1.0217699786349754 0.6730505545369054 1.4623372172684237 0.23331960175184685 0.1921747013037123 6.576422182266588 2.9571706612480706 0.03764436702718531 6.97843601424325 1.4601851250784556e-05 4.835592080035246 0.7892866627315183 RSQSS(ph)SQFR ddPTM_A549_PD325901_60min_R1 1 RSQSSSQFR 9 1 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 RS(0.003)QS(0.325)S(0.553)S(0.119)QFR 86.911 0.00048601 11849000.0 1802.3 1643.0 1780.7 1594.5 1638.0 1863.7 1643.5 1737.6 1748.0 1830.4 1610.8 True False 1985.2681692168644 1781.4613761090006 1901.5490102189779 1692.9886436277598 1522.9525307932304 1848.5226451077665 1706.044291857709 1702.942204879171 1674.5376388337434 1714.828231621982 1412.6818117025043 1.4053187014734076 1.2610492761721472 1.3460561284690935 1.1984217745307002 1.078057718431182 1.3085201704975626 1.2076635217676206 1.2054676366413022 1.1853607974294378 1.213881439837711 1.0 10.464220838534667 -14.999999999990878 0.07093818775460754 0.1382328178073145 1.5460546288579622 0.2704101538264513 0.09298495977616379 84.34818406962756 0.44722318694991847 11.880433834823378 1.5606641241627084 1.0000000000210033e-15 14.999999999990878 1.4078218110506477 RSRS(ph)ESETSTMAAK ddPTM_A549_MK2206_60min_R1 2 RSRSESETSTMAAK 14 2 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 RS(0.046)RS(0.84)ES(0.114)ETSTMAAK;RS(0.061)RS(0.69)ES(0.182)ET(0.049)S(0.014)T(0.004)MAAK 119.68 8.3118e-07 66029000.0 3976.8999999999996 4652.5 4369.9 4259.2 5149.8 4396.7 4751.6 4194.9 6792.2 7086.9 7211.6 True False 4648.1034941300395 4889.292377565789 4989.617529693842 5302.7041912027535 4392.271241898808 4861.955875706745 5614.904214293366 4789.539921342455 5253.777544914603 5485.96436793419 5420.760689965342 0.8574633266387116 0.9019568760186403 0.9204644541734498 0.9782214147580561 0.810268427829617 0.8969139487575922 1.0358148118745425 0.8835549464872388 0.9691956250052044 1.0120285107013762 1.0 12.404279602410138 -8.435431106196788 0.3670095435289054 1.0037375992759456 0.8859257664532205 0.34607188132535904 0.05468108114689357 0.9595970214224038 0.34810211455393353 0.030703627590658488 0.03760820073161708 3.669178954211818e-09 8.435431106196788 -0.11781183282272512 RSRS(ph)PLELEPEAK ddPTM_A549_MK2206_60min_R1 1 RSRSPLELEPEAK 13 2 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 RS(0.451)RS(0.549)PLELEPEAK 52.453 0.004938199999999999 2354600.0 315.98 424.62 377.01 197.01 454.83 314.02 342.98 266.35 586.39 490.23 455.78 True False 369.309699030705 446.2313443013403 430.4756870568832 245.277458844115 387.9251095096579 347.24938797039414 405.2950263949702 304.1059281626651 453.57360127241157 379.48670252047833 342.59724711193155 1.0779704219574366 1.3024954171787317 1.2565065559801198 0.7159352881898062 1.1323065575682139 1.0135790374782045 1.183007247756881 0.8876484873309833 1.3239265787918675 1.1076758663985833 1.0 8.420369748686651 -8.770064484807527 24.997821422186444 1.15296529520727 1.0770725650262116 0.03300706118248453 0.17117140750744833 603.2078946792797 1748250.9217806663 0.032653659141921254 0.03501513092800697 1.6979915129807196e-09 8.770064484807527 -0.07589273018105835 RSRS(ph)PLELEPEAK ddPTM_A549_PD325901_60min_R1 1 RSRSPLELEPEAK 13 2 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 RS(0.444)RS(0.556)PLELEPEAK 53.278 0.0073236 16629000.0 5096.4 5132.5 4846.2 5696.9 6165.1 5142.0 5129.4 5503.7 5683.1 6304.5 6671.5 True False 5613.782776228617 5565.033787510316 5175.092274567987 6048.7845744013675 5732.084644440381 5100.125256824667 5324.602123915379 5393.9243859308735 5444.2590705126095 5906.432794067302 5850.947794122956 0.9594655385350452 0.9511337279577456 0.8844878567821373 1.033812774825496 0.9796848042633421 0.8716750578337992 0.9100409559736167 0.921888995719438 0.9304918215098673 1.0094830789637328 1.0 12.514454630234082 -10.662332975929244 0.9581524080074187 0.9995359876393991 0.9377441961212961 0.2599227863926027 0.04280110699434394 0.6849589648183938 1.1318389275741145 0.028338043333688265 0.0077715872552062285 2.1760407503929435e-11 10.662332975929244 -0.06179179151810299 RSS(ph)DEDAAGEPK ddPTM_A549_MK2206_60min_R1 1 RSSDEDAAGEPK 12 1 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RS(0.133)S(0.867)DEDAAGEPK 89.62899999999999 0.0002207 2231300.0 593.95 930.73 668.81 421.07 859.26 749.02 336.3 347.23 577.34 980.3 800.0 True False 694.194239316688 978.1001815307479 763.657314820599 524.2321689025504 732.863992254839 828.280799240764 397.40135686229036 396.45091584727703 446.5734118225315 758.8495491520819 601.3379211232289 1.1544162024906304 1.626539998847522 1.2699304134922615 0.8717763348823006 1.2187223963623228 1.377396585423438 0.6608619594786092 0.6592814155254888 0.7426330456399368 1.2619352987661907 1.0 9.23203212933547 -7.756823883397639 24.999708203339978 0.8406160502568771 1.2519688792623929 0.4091346352871462 0.2314449371236573 79.728888571876 431846.8429348036 0.033033388973939704 0.048096001133457474 1.7505564364139042e-08 7.756823883397639 0.41135282900551573 RSS(ph)DGS(ph)LSHEEDLAK ddPTM_A549_MK2206_60min_R1 1 RSSDGSLSHEEDLAK 15 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 2 RS(0.485)S(0.557)DGS(0.876)LS(0.082)HEEDLAK 62.617 0.0012420999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RSS(ph)DGSLS(ph)HEEDLAK ddPTM_A549_PD325901_60min_R1 2 RSSDGSLSHEEDLAK 15 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 2 RS(0.233)S(0.742)DGS(0.293)LS(0.731)HEEDLAK;RS(0.152)S(0.657)DGS(0.507)LS(0.683)HEEDLAK 83.08200000000001 6.1308e-05 69135000.0 17368.6 20167.9 17317.8 15908.9 18160.6 14697.4 14344.2 18650.6 15193.400000000001 20649.1 20996.0 True False 19131.84748591246 21867.519712251218 18493.090048391205 16891.55662126663 16885.06210666882 14577.709247307435 14890.07638044743 18278.59915188733 14554.87423447174 19345.312302002538 18413.625104609982 1.039004942113363 1.1875727667973717 1.0043155513012658 0.9173400960051972 0.916987394429005 0.7916805715599045 0.8086444844974927 0.992667063006032 0.7904404565523506 1.0505977064320322 1.0 14.168486058687051 -6.086587393409783 2.7034342180786535 0.8926260608001759 1.1132526828676526 0.4317601703698464 0.08924923779861076 0.1778797906317803 2.511247248683482 0.012870777058469939 0.04260652905635328 8.192427497487515e-07 6.086587393409783 0.22062662206747663 RSS(ph)DPALIGLSTSVSDSNFSSEEPSR ddPTM_A549_PD325901_60min_R1 1 RSSDPALIGLSTSVSDSNFSSEEPSR 26 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RS(0.281)S(0.719)DPALIGLSTSVSDSNFSSEEPSR 224.73 1.6970999999999995e-95 678200000.0 5996.0 5496.1 5658.7 6080.2 7515.0 6360.9 6254.0 6921.9 7199.2 6653.9 7673.5 True False 6604.709505978096 5959.275635564629 6042.733410527398 6455.760144863903 6987.172325342572 6309.098939349674 6491.999392320117 6783.8372743744985 6896.6426598923745 6233.771618438324 6729.708146324292 0.9814258452776337 0.8855176934856429 0.8979190893780269 0.9592927366976506 1.0382578521118935 0.937499636265155 0.9646777023853539 1.0080433098840655 1.0248056096844647 0.9263063840061408 1.0 12.716328224121655 -6.876919944383982 0.6642914051175405 1.010243679361914 0.9153213708117681 0.11253506343253994 0.04525730172896667 0.6107982859312956 0.4699242891143692 0.007195655580134768 0.029497887402542288 1.327639165365343e-07 6.876919944383982 -0.09492230855014594 RSS(ph)DTEEESR ddPTM_A549_MK2206_60min_R1 2 RSSDTEEESR 10 1 C9J8Q2;C9JVB3;F8WDM0;C9J367;C9J713;Q96IZ7-2;Q96IZ7 C9J8Q2 RSRC1 Serine/Arginine-related protein 53 1 RS(0.227)S(0.772)DT(0.001)EEESR;RS(0.213)S(0.782)DT(0.005)EEESR 149.82 1.2113e-08 48049000.0 2160.33 1838.99 2066.86 956.3199999999999 0.0 0.0 0.0 185.942 283.796 2804.71 2986.68 True False 2524.940889002477 1932.5867360386248 2359.971827140898 1190.6184429308366 0.0 0.0 0.0 212.29984792349265 219.51665912908706 2171.1240630443067 2245.0049278254055 1.1246928047718041 0.8608385273838127 1.0512100877332387 0.5303411267271085 0.0 0.0 0.0 0.09456542624569386 0.09778003442590168 0.9670910010640099 1.0 11.13250289637304 -10.96823071630552 1.276831025392375 0.9950856475340034 0.37640882042298124 0.21420351119269043 0.4110190801171408 0.5972143895019015 1.7535320232762246 0.31405972341796995 0.07512829722195263 1.0758934998969277e-11 10.96823071630552 -0.6186768271110221 RSS(ph)DTEEESR ddPTM_A549_PD325901_60min_R1 2 RSSDTEEESR 10 1 C9J8Q2;C9JVB3;F8WDM0;C9J367;C9J713;Q96IZ7-2;Q96IZ7 C9J8Q2 RSRC1 Serine/Arginine-related protein 53 1 RS(0.032)S(0.968)DTEEESR;RS(0.234)S(0.679)DT(0.083)EEES(0.004)R 194.13 4.1003999999999995e-16 133853000.0 3236.5699999999997 3111.9900000000002 3242.71 2805.64 3573.3500000000004 2353.84 2062.1099999999997 2105.8 2516.7200000000003 3673.8900000000003 3940.42 True False 3565.1442037630964 3374.248318829854 3462.7798005993063 2978.9380107292477 3322.3702233882746 2334.6711074531654 2140.584724479888 2063.7981670318577 2410.951010529552 3441.919958410012 3455.7733203804205 1.0316487434918433 0.9764090424942594 1.0020274710084613 0.8620177698464663 0.9613970348675935 0.6755857201872716 0.6194227821181995 0.5972029921235312 0.6976588991850161 0.9959912411243214 1.0 11.75479287245037 -6.61469343574776 1.5657447120422119 0.8044558129003017 1.0016096193000195 0.32543397544750363 0.13534636107172918 0.4917745833507196 2.394222837545065 0.0248474023770791 0.06973205335705286 2.428323620264451e-07 6.61469343574776 0.1971538063997178 RSS(ph)EEREAGEI ddPTM_A549_MK2206_60min_R1 1 RSSEEREAGEI 11 2 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 RS(0.115)S(0.885)EEREAGEI 68.03399999999999 0.0014142999999999998 26888000.0 167.25 263.55 218.71 142.0 96.822 191.21 0.0 108.69 154.36 346.58 364.31 True False 195.47771113008855 276.9635692869346 249.7263667176227 176.79000637462227 82.57961205932786 211.4437152850744 0.0 124.09714034916487 119.39770646226823 268.2873372897361 273.8417725555042 0.713834523147734 1.0114000019146008 0.9119367158164535 0.6455918128370617 0.30155958781850944 0.7721382801165498 0.0 0.4531709650835392 0.4360098364396464 0.979716625356556 1.0 8.097198725712907 -6.281813552407965 7.3086377775942415 0.6228825700395134 0.8925617892210859 0.17053245616463453 0.28502736883744934 0.3022584518172036 80.50783308530043 0.045361359541266785 0.10887471695691789 5.226205078102981e-07 6.281813552407965 0.26967921918157245 RSS(ph)EEREAGEI ddPTM_A549_PD325901_60min_R1 1 RSSEEREAGEI 11 2 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 RS(0.17)S(0.83)EEREAGEI 63.091 0.054904999999999995 18814000.0 398.85 434.97 439.89 274.98 346.38 760.19 424.55 442.49 638.21 475.63 533.55 True False 439.340958382149 471.62644842734795 469.7435806734579 291.96489007510905 322.051463746129 753.9992646801916 440.706482572674 433.6641898233102 611.3882531350589 445.59864062847663 467.92673245211756 0.9389097222119197 1.0079066138321324 1.003882762183343 0.6239542856316411 0.688251902297726 1.6113618060010015 0.9418279658082391 0.9267779755833604 1.306589708887003 0.9522829317602073 1.0 8.870138841371919 RSS(ph)FFR ddPTM_A549_PD325901_60min_R1 1 RSSFFR 6 1 P61006 P61006 RAB8A Ras-related protein Rab-8A 1 RS(0.129)S(0.871)FFR 42.108999999999995 0.060903 3951600.0 200.9 234.8 168.48 142.71 162.92 273.09 245.61 182.74 104.97 236.44 193.1 True False 221.29522010523675 254.58742003067175 179.91406595254307 151.5248725820743 151.4770612434879 270.8660455827008 254.95682295294898 179.09510734324328 100.55847594300796 221.51113804889724 169.34992416175413 1.3067335057904557 1.5033217244756676 1.0623805522386809 0.8947442600408 0.8944619372773086 1.5994459219478823 1.5055030240782845 1.0575446563069084 0.5937910893125633 1.3080084868377115 1.0 7.403863530539563 -8.534822245941928 10.687630456495844 0.8090037048301792 1.2434917914127461 0.10793498970970283 0.2820246154170448 0.24988995298528766 213.21040797836287 0.046270769959950456 0.05283039588095295 2.9186213433184403e-09 8.534822245941928 0.4344880865825669 RSS(ph)FLNAK ddPTM_A549_MK2206_60min_R1 2 RSSFLNAK 8 1 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8T6 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 RS(0.03)S(0.97)FLNAK;RS(0.187)S(0.813)FLNAK 123.51 0.00047562 28601000.0 3196.57 3313.24 3825.5 3247.04 4254.9 3605.0 3278.1200000000003 3414.7 4821.5 4365.8 4536.6 True False 3736.072867366859 3481.8697640077517 4368.013423612391 4042.564945765162 3629.009846431948 3986.4787071946694 3873.7119713274196 3898.7441820801655 3729.4379483533694 3379.562747820214 3410.03701620955 1.0956106486843116 1.0210650932692946 1.2809284482394523 1.1854900479229116 1.0642142091659166 1.1690426491692067 1.1359735841323126 1.1433143287147778 1.0936649457544163 0.9910633614108947 1.0 11.735571684560245 -9.820441356669088 0.6226851038575568 1.002875540992783 1.1403122711382017 0.40302058052236955 0.06457331370318979 0.5615394396753486 0.45327801257733563 0.034951546198158184 0.015463466751516018 1.51202385606251e-10 9.820441356669088 0.13743673014541868 RSS(ph)FLNAK ddPTM_A549_PD325901_60min_R1 1 RSSFLNAK 8 1 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8T6 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 RS(0.169)S(0.831)FLNAK 83.869 0.0013677 25196000.0 2316.0 2043.5 2444.0 2274.0 2556.6 2476.7 2396.6 2323.2 2435.5 2443.3 2901.6 True False 2551.118615050911 2215.712916663874 2609.864536965905 2414.4598153712923 2377.0332357911916 2456.5305763472693 2487.8039244698393 2276.861953484858 2333.1444046793945 2289.029621023815 2544.7215947578766 1.002513838962271 0.8707093621668632 1.025599241324561 0.9488109899114608 0.9341034558310336 0.9653435493327519 0.9776330462219177 0.8947391173066598 0.9168564488491272 0.8995206492290603 1.0 11.313292111559193 -11.004221119983189 1.3266977854131579 0.9995763206614363 0.9445166973726545 0.0 0.052065358409397806 0.5730883821229956 1.8180481257889634 0.027696773222756207 0.006514279756542564 9.903275936142688e-12 11.004221119983189 -0.05505962328878178 RSS(ph)FSMEEES ddPTM_A549_MK2206_60min_R1 2 RSSFSMEEES 10 1 P19532 P19532 TFE3 Transcription factor E3 1 RS(0.282)S(0.715)FS(0.003)MEEES;RS(0.206)S(0.793)FS(0.001)MEEES 126.71 3.7163e-06 23359900.0 2455.3 3077.6000000000004 4020.7 2785.3599999999997 3477.3 2823.3 2319.7 2807.3999999999996 3597.5 4439.200000000001 4020.3 True False 2869.6946136783636 3234.2366945075714 4590.895718812792 3467.773325039562 2965.7937763514547 3122.0597320451357 2741.1594633168447 3205.357547301918 2782.6719940270136 3436.3816368417024 3021.9485553646464 0.9496172952990886 1.0702487601140878 1.5191839419843558 1.1475289077583652 0.9814176919347273 1.0331280214889063 0.9070834308051547 1.0606922945831354 0.9208204385501989 1.1371410114647196 1.0 11.561263385418952 -6.724986437331701 4.711217475155132 0.9711901215038998 1.193055784934966 0.21215336689498976 0.1440196001364611 0.16467448956476352 8.344820810272555 0.019057938783810614 0.03965979030656666 1.8837079152584258e-07 6.724986437331701 0.22186566343106606 RSS(ph)FSMEEES ddPTM_A549_PD325901_60min_R1 2 RSSFSMEEES 10 1 P19532 P19532 TFE3 Transcription factor E3 1 RS(0.148)S(0.743)FS(0.109)MEEES;RS(0.274)S(0.718)FS(0.008)MEEES 61.193999999999996 0.0031188 31205000.0 2871.8 3231.1 3348.3 3971.6 8890.6 8410.4 5326.4 6045.8 3358.9 3436.8999999999996 3193.3 True False 3163.3430218925787 3503.396136546437 3575.5357729635593 4216.916711841961 8266.154926904943 8341.908490859229 5529.0990667179185 5925.211776161651 3217.737113889393 3219.893547454976 2800.544343996529 1.129545771583219 1.250969706677417 1.2767288547415305 1.5057489522998204 2.9516243671073927 2.9786739527055204 1.9742944183585374 2.115735745753646 1.1489684570741372 1.1497384622233882 1.0 11.451491556852872 -8.812141957037499 6.820650885946873 1.0675262592006878 1.9159539973161728 0.26228472738180586 0.5953861868668067 0.21078626728705466 21.881174553645607 0.11502057993521288 0.12258605342449012 1.5411966025125334e-09 8.812141957037499 0.848427738115485 RSS(ph)GENVENNSQR ddPTM_A549_MK2206_60min_R1 1 RSSGENVENNSQR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 RS(0.163)S(0.837)GENVENNSQR 70.235 0.0012078 13500000.0 431.83 524.35 409.76 297.49 343.73 334.31 331.72 284.81 448.68 686.51 720.57 True False 504.7123467701412 551.0371753200691 467.8701295149423 370.37506335483374 293.1677723363775 369.6864623029822 391.9892301467706 325.18268969404426 347.05469639473 531.4269141980983 541.6325822797063 0.9318352759463444 1.0173634182064515 0.8638145946569512 0.6838123766408999 0.5412668696968856 0.682541033161242 0.7237179648552644 0.6003750518947096 0.6407566822032621 0.9811575809589357 1.0 9.081170717608382 -4.364906148579296 19.24813908213165 0.7908925197602914 0.9755020251935497 0.0 0.16658810176667985 0.0 0.0 0.025060691921520137 0.0 4.3161233855759196e-05 4.364906148579296 0.18460950543325827 RSS(ph)GENVENNSQR ddPTM_A549_PD325901_60min_R1 1 RSSGENVENNSQR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 RS(0.126)S(0.874)GENVENNS(0.001)QR 51.211000000000006 0.021419 1949600.0 227.13 0.0 0.0 295.86 245.43 184.05 190.45 241.78 132.08 168.39 348.23 True False 250.18807039573133 0.0 0.0 314.1346002531882 228.1918434875351 182.55115782158302 197.69767896823882 236.9575082272593 126.52913692057253 157.75782666238283 305.399917611847 0.8192145968870624 0.0 0.0 1.0286008022190847 0.7471902588315666 0.5977446203950827 0.6473403153287877 0.7758925086824165 0.41430638852164586 0.5165614578288384 1.0 8.25455586271173 -14.999999999937856 0.2801824073115161 4.522586295600918 0.5001595365095287 0.0 0.33869509449954155 51.09116983510149 0.6725137682290345 101.26613170151923 0.13057814177366436 1.000000000143092e-15 14.999999999937856 -4.02242675909139 RSS(ph)GFISELPSEEGK ddPTM_A549_MK2206_60min_R1 1 RSSGFISELPSEEGK 15 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.084)S(0.916)GFISELPSEEGK 177.67 8.3412e-28 5857700.0 2106.9 2925.6 2525.9 2319.4 3292.6 2233.5 2153.2 2649.0 3829.7 3829.7 3319.7 True False 2462.4932112405595 3074.5005437520604 2884.1106016736458 2887.6531041218236 2808.262901680844 2469.847487522691 2544.4085685277555 3024.503862222262 2962.279064774221 2964.5681101578366 2495.3268709409786 0.9868419403955533 1.2321033286483536 1.1558047305385921 1.157224385209662 1.1254088329605727 0.9897891600034431 1.0196694461789162 1.2120672034769266 1.187130671845471 1.1880480047248916 1.0 11.28501309589502 -10.988863929559658 1.2903838999076438 1.0006441914723898 1.1271350381733736 0.0 0.09847349456128728 0.5314049303973878 1.5875484739553116 0.05798191914073362 0.013579848457709978 1.0259733274676783e-11 10.988863929559658 0.12649084670098376 RSS(ph)IGLR ddPTM_A549_MK2206_60min_R1 2 RSSIGLR 7 1 Q96GN5-5;Q96GN5-4;Q96GN5-2;Q96GN5;C9J8L0;C9IZR6 Q96GN5-5 CDCA7L Cell division cycle-associated 7-like protein 1 RS(0.15)S(0.85)IGLR;RS(0.141)S(0.859)IGLR 62.823 0.011289 15490700.0 490.37 483.76 380.1 495.12 792.71 540.0 671.4000000000001 729.71 1178.8999999999999 952.6199999999999 974.03 True False 573.1324676045533 508.3813176939765 434.00389552086517 616.4244222267818 676.1034090965874 597.1424415770108 793.3846892576324 833.1486271431515 911.8810323164552 737.4224803766766 732.1514691395724 0.7828058697718671 0.6943663150624124 0.5927788358205556 0.8419356488503758 0.9234474526031438 0.8155995948198741 1.083634633950843 1.1379457151431676 1.2454813938816536 1.0071993452984513 1.0 9.51599833715099 -7.338350905813433 1.0244491104245288 1.1213456248827591 0.707802965122847 0.7269920035125879 0.09813474820584264 0.20960306012447977 0.4355334958928772 0.019785170690086326 0.04264695034517302 4.58827135060184e-08 7.338350905813433 -0.4135426597599121 RSS(ph)LDEK ddPTM_A549_MK2206_60min_R1 1 RSSLDEK 7 1 Q9NWB6;Q9NWB6-2;Q9NWB6-3 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 RS(0.184)S(0.816)LDEK 108.43 0.0037486999999999993 11398000.0 4412.4 3909.6 2771.5 2505.0 1431.8 1154.6 1603.3 1628.4 1504.8 6090.9 6313.4 True False 5157.1052471772955 4108.581940748245 3164.54037473317 3118.7251124537247 1221.1841166939917 1276.7790056385486 1894.5988565486484 1859.2306867658476 1163.9652026718136 4714.961459686234 4745.60853902424 1.0867110518638912 0.8657650345498207 0.6668355277748724 0.6571812838770255 0.25732929858244974 0.2690443164747574 0.39923201439160494 0.39177919364333624 0.24527206428854334 0.9935420127711783 1.0 12.212377383487034 -5.604094533835756 1.5362779968448386 0.5480918039361711 1.1294006863333321 0.32709741618383115 0.2548427303922081 0.7171356202009388 2.424812585200883 0.04564311260818577 0.5160216114331212 2.4883156221901865e-06 5.604094533835756 0.581308882397161 RSS(ph)LGEK ddPTM_A549_MK2206_60min_R1 2 RSSLGEK 7 1 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 RS(0.021)S(0.979)LGEK;RS(0.037)S(0.963)LGEK 104.39 0.004227300000000001 181232000.0 7879.799999999999 7291.200000000001 5466.7 4754.7 5960.1 5952.200000000001 5575.700000000001 6406.2 6718.1 12312.599999999999 11354.2 True False 9209.717597386383 7662.290936766825 6241.960262151837 5919.601713446594 5083.377185296727 6582.057853249407 6588.732516970189 7314.29846816469 5196.46107660122 9531.175108527912 8534.638780021702 1.079098698230198 0.8977873738140024 0.7313678320825155 0.6935972178814979 0.5956171451797285 0.771216922344389 0.7719989898568894 0.8570132441089782 0.6088671366813262 1.1167637382426718 1.0 13.05911437859473 -5.408655078121743 2.89747002194892 0.7821082079579583 1.0896145595778348 0.23918867621465456 0.14818671046656395 0.33720155381214556 4.536850242632256 0.02098198958123047 0.2005240764082844 3.902518062869014e-06 5.408655078121743 0.3075063516198765 RSS(ph)LGEK ddPTM_A549_PD325901_60min_R1 2 RSSLGEK 7 1 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 RS(0.181)S(0.819)LGEK;RS(0.019)S(0.981)LGEK 140.17 0.0022761 250780000.0 11170.7 10570.3 8169.900000000001 7936.9 10617.8 8903.599999999999 7638.5 8375.6 9236.4 12280.900000000001 13360.099999999999 True False 12304.74124056529 11461.096277471079 8724.358543599728 8427.144286992265 9872.042357421467 8831.092033579169 7929.187297447587 8208.542087468906 8848.226228446214 11505.481878128498 11716.892396651743 1.0501710542363205 0.9781686038822238 0.7445966258163154 0.7192303216337834 0.8425478380464204 0.7537059942705261 0.67673125509913 0.7005733098491718 0.7551683440375975 0.9819567756222068 1.0 13.516302362412851 -4.311325491961224 16.525351123198636 0.8442023404379309 0.8227184480859784 0.0 0.1327861613913346 0.0 0.0 0.019398247429116732 0.0 4.882862648296141e-05 4.311325491961224 -0.02148389235195247 RSS(ph)LLNAK ddPTM_A549_MK2206_60min_R1 2 RSSLLNAK 8 1 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 RS(0.166)S(0.834)LLNAK;RS(0.089)S(0.911)LLNAK 115.29 0.00054741 344890000.0 5273.9 5852.4 5858.5 5008.2 6917.9 5389.700000000001 5822.700000000001 5414.9 7129.0 6508.3 7212.799999999999 True False 6164.005385524507 6150.262162378505 6689.323393604286 6235.209224826639 5900.286074086713 5960.0344766066955 6880.609219750403 6182.4786574357595 5514.292882673684 5038.0705097893415 5421.662696847026 1.1369215921730413 1.1343867197705229 1.2338140101364972 1.15005480301324 1.0882798145148407 1.0993001243092382 1.2690957745770184 1.1403288996623095 1.017085198952072 0.9292482383161234 1.0 12.404519644845603 -8.749785741304452 4.6916314694189865 1.007451461630419 1.1586040065636587 0.6579657079753543 0.05533202712311138 0.08579087895203641 4.705583311827058 0.008735332575403737 0.009620195655985231 1.779156938637448e-09 8.749785741304452 0.1511525449332396 RSS(ph)LLNAK ddPTM_A549_PD325901_60min_R1 1 RSSLLNAK 8 1 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 RS(0.295)S(0.705)LLNAK 77.867 0.0018349 253950000.0 4877.8 5242.3 5893.3 4829.3 6462.4 5795.5 5950.6 6361.9 5788.9 6960.0 6523.8 True False 5372.990665153432 5684.087018853452 6293.254777291799 5127.594892863934 6008.503318069702 5748.303369491903 6177.053339293264 6235.006913685995 5545.612664442021 6520.5444121989685 5721.4139577755095 0.9391018906876046 0.9934759240989145 1.0999474646890646 0.8962111342940735 1.0501780438214985 1.004699784339123 1.0796375484942025 1.0897667883674984 0.9692731037063712 1.139673594730447 1.0 12.482156015194443 -3.7979461299447284 16.398808386917487 1.001764228295819 0.47250495783843094 0.0 0.07447737101897231 0.0 0.0 0.007763802816135204 0.0 0.000159240623748601 3.7979461299447284 -0.5292592704573881 RSS(ph)LLSLMTGK ddPTM_A549_MK2206_60min_R1 1 RSSLLSLMTGK 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 RS(0.148)S(0.851)LLSLMTGK 80.52199999999999 0.00069685 5077900.0 2881.0 3125.1 3036.5 2890.6 4401.7 3608.6 2950.4 3480.4 4646.1 4783.9 5094.6 True False 3367.2423663126156 3284.1542416186644 3467.1213595083063 3598.797129763966 3754.2157608967314 3990.4596568051834 3486.4494894038103 3973.757358277977 3593.765768297128 3703.2136674371563 3829.470216192999 0.879297181128125 0.8576001525567547 0.905378854977774 0.9397637079265881 0.9803485988798 1.0420396116234139 0.9104260622425739 1.0376780948641033 0.9384498547869129 0.9670302831389146 1.0 11.902929102572653 -6.263533772052655 1.8981676379195656 0.9765790574312364 0.8691064687753968 0.5923880781094789 0.03712570891926747 0.19164126726415304 1.3145377496611579 0.005423758814013311 0.01821825982888262 5.450875063873833e-07 6.263533772052655 -0.10747258865583964 RSS(ph)LLSLMTGK ddPTM_A549_PD325901_60min_R1 2 RSSLLSLMTGK 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 RS(0.195)S(0.805)LLSLMTGK;RS(0.011)S(0.989)LLSLMTGK 144.18 1.0354e-11 43491000.0 12480.1 12759.3 13391.6 11813.8 15992.9 14273.900000000001 13726.199999999999 13399.5 15750.3 15034.1 15580.400000000001 True False 13747.070564635958 13834.570989767248 14300.434506232654 12543.51159491353 14869.613876509808 14157.658090896466 14248.558052264852 13132.236460795597 15088.369664143649 14084.844360264442 13664.10957229308 1.0060714525087753 1.0124751207952705 1.0465690743017648 0.9179896815485289 1.0882241391463332 1.0361200644646587 1.0427725258553888 0.9610751722471569 1.104233655644753 1.030791233467894 1.0 13.738103828617126 RSS(ph)LNGKGESSLTALER ddPTM_A549_PD325901_60min_R1 1 RSSLNGKGESSLTALER 17 2 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RS(0.344)S(0.656)LNGKGESSLTALER 157.59 7.439e-23 12314000.0 2201.9 2064.2 2609.3 2422.5 2308.4 2349.0 2706.3 2334.9 2026.7 2633.0 2556.7 True False 2425.4352670468943 2238.157378310529 2786.3827889955546 2572.132323103322 2146.2659475476767 2329.870522808468 2809.289727444182 2288.3285878063857 1941.5248470390993 2466.7519306494078 2242.242108256638 1.081700882396099 0.9981782832767846 1.2426770413128985 1.1471251537164184 0.9571963436260754 1.0390807104322743 1.252893127418978 1.0205537481345315 0.8658854634340317 1.1001273776663343 1.0 11.130726347606121 -8.523640506572125 24.9999997033421 0.9370129382752973 1.1005092507201741 0.15502942680366816 0.10285727686757729 20.48111589988615 672151.0666813358 0.016237477787793254 0.018490196667210197 2.9947425515985823e-09 8.523640506572125 0.16349631244487683 RSS(ph)LNSISSSDAK ddPTM_A549_MK2206_60min_R1 1 RSSLNSISSSDAK 13 1 Q14123-2;Q14123;A0A0A0MS69;Q14123-3 Q14123-2 PDE1C Calcium/calmodulin-dependent 3,5-cyclic nucleotide phosphodiesterase 1C 1 RS(0.269)S(0.73)LNS(0.001)ISSSDAK 75.316 0.0001524 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RSS(ph)LPNGEGLQLK ddPTM_A549_MK2206_60min_R1 1 RSSLPNGEGLQLK 13 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RS(0.2)S(0.8)LPNGEGLQLK 148.36 5.02e-13 20224000.0 1574.6 1415.8 1445.0 1353.4 1878.5 1343.8 1446.5 1687.4 2199.8 2107.4 2156.5 True False 1840.3539847260822 1487.8581726292618 1649.922728302158 1684.9830607564338 1602.1751384339027 1486.0000240577538 1709.310326200724 1926.5941174457703 1701.548812358757 1631.3368763471349 1620.9815336278039 1.1353330969831077 0.9178748441997312 1.017854117443018 1.039483193238724 0.9883981434681666 0.9167285334411197 1.0544909307974888 1.1885355122670624 1.0497027739425515 1.0063883162790606 1.0 10.662651940295246 RSS(ph)LPNGEGLQLK ddPTM_A549_PD325901_60min_R1 1 RSSLPNGEGLQLK 13 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RS(0.324)S(0.676)LPNGEGLQLK 158.45 7.694800000000001e-19 39314000.0 3113.8 3519.8 3412.3 2921.7 3577.4 3511.1 3407.6 3273.4 3403.5 4001.5 3920.8 True False 3429.9106837415934 3816.425898739172 3643.8791978268196 3102.1667733378617 3326.135765360014 3482.506765701497 3537.2780827102665 3208.109469067376 3260.462730990072 3748.8446070997356 3438.566455998994 0.9974827381212017 1.1098886549308817 1.0597088189090056 0.9021686255112963 0.9673030339597388 1.0127786710726046 1.0287072034158473 0.9329787602244656 0.948204076527822 1.0902347402823709 1.0 11.74759151299867 -6.168255998024554 11.513871565662534 0.9739562865834551 1.0613156411426523 0.22870073352828757 0.05450541801518331 0.486599725724651 58.426527701695136 0.005828120029890421 0.015431890992095267 6.788033890965905e-07 6.168255998024554 0.08735935455919719 RSS(ph)LSR ddPTM_A549_MK2206_60min_R1 1 RSSLSR 6 1 E7EMW7;O95071-2;O95071;E5RJN0;Q5T1R4-2;Q5T1R4;B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5 E7EMW7;B1ALK7 UBR5;HGSNAT;HIVEP3;ARHGEF7 E3 ubiquitin-protein ligase UBR5;Transcription factor HIVEP3;Rho guanine nucleotide exchange factor 7 1 RS(0.174)S(0.768)LS(0.058)R 71.692 0.039524000000000004 6480200.0 832.82 694.73 584.83 507.78 1119.2 835.71 774.99 1043.8 998.48 1130.3 1438.1 True False 973.3796555058914 730.088789568249 667.7676880228036 632.1861227951108 954.5671625952747 924.1442775005988 915.7956513669541 1191.761846503434 772.3258742449183 874.9644449725566 1080.9800804591441 0.9004603073651924 0.6753952295384993 0.6177428243998452 0.5848268013658411 0.8830571255205962 0.8549133274574962 0.8471901267394046 1.1024827080969297 0.7144681832775998 0.8094177319168705 1.0 10.078124223009777 -6.781508292562017 24.816269237635492 0.8793835523479523 0.6877438392249842 0.3714608296656432 0.12021020322219628 204.6389446764528 253046.483874112 0.01983642693061274 0.03752190954904722 1.653833205633369e-07 6.781508292562017 -0.19163971312296812 RSS(ph)LSSR ddPTM_A549_MK2206_60min_R1 2 RSSLSSR 7 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 RS(0.229)S(0.761)LS(0.008)S(0.002)R;RS(0.16)S(0.84)LSSR 107.21 0.0038941 148776000.0 2996.9 2864.1000000000004 2656.6000000000004 2160.8 4070.0 3817.3999999999996 3136.9 3222.3999999999996 5093.9 4397.1 4474.4 True False 3502.70345282967 3009.8704564398017 3033.3458269948173 2690.1960970019986 3471.3083914963977 4221.35473421496 3706.8341253087106 3679.1850681861156 3940.1397832867847 3403.792056081423 3363.282992842218 1.0414536809076633 0.8949203688317179 0.901900266332159 0.7998720603432148 1.0321190333623667 1.2551292124982947 1.1021475543977841 1.093926700790925 1.1715159835411533 1.0120445003662841 1.0 11.715654459658964 -6.981016019100628 14.173770442029197 1.0984840682513664 0.9089328595408025 0.5454702854471272 0.08354547645469242 1.163590595558056 866.669888949738 0.013187086625058745 0.024873249245465058 1.0446816850685736e-07 6.981016019100628 -0.18955120871056386 RSS(ph)LSSR ddPTM_A549_PD325901_60min_R1 3 RSSLSSR 7 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 RS(0.086)S(0.913)LS(0.001)SR;RS(0.216)S(0.78)LS(0.004)SR;RS(0.22)S(0.627)LS(0.077)S(0.077)R 85.71600000000001 0.010833 271941000.0 6960.0 6295.4 5053.2 5393.1 5964.6 4957.5 4558.5599999999995 4717.7 6195.4 7265.099999999999 7914.4 True False 7666.574076318804 6825.935451708217 5396.140539360108 5726.219538381224 5545.66707275293 4917.127763653887 4732.038495339749 4623.601772535946 5935.028883083848 6806.38034613028 6940.978973515206 1.1045378621045046 0.983425461704183 0.7774321979579882 0.8249873051382006 0.7989747691087399 0.7084199192097026 0.6817537574160442 0.6661310731783355 0.8550708633076435 0.9806081205693726 1.0 12.76092344323355 -5.528802534179418 4.275621782845068 0.8575064606567728 1.0852575236953546 0.3562509654164785 0.11158045579736944 0.21182934426997027 9.138497863582522 0.019085036716362195 0.09876776057798227 2.959357726956074e-06 5.528802534179418 0.22775106303858172 RSS(ph)LVG ddPTM_A549_PD325901_60min_R1 1 RSSLVG 6 1 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 RS(0.027)S(0.973)LVG 57.047 0.059659000000000004 173790000.0 1434.4 1918.8 1688.8 1616.8 2290.5 2056.6 2009.4 2393.6 2538.0 2108.5 1959.4 True False 1580.01923205053 2080.5040100291844 1803.4121235793843 1716.6660639807853 2129.6231817960283 2039.8517314635556 2085.8688165858703 2345.8577702571247 2431.336686132745 1975.3689501611377 1718.406221659975 0.919467825555378 1.2107172237885777 1.0494678736889662 0.9989873420747344 1.2393013682985965 1.1870602572033668 1.2138391902299606 1.3651357523548964 1.414878889221014 1.1495354970566491 1.0 10.746855406527835 -6.769242570813053 24.771853588964753 1.2163435637977027 1.0568647041587704 0.3360430729954663 0.12066750776893098 214.01909053181254 679423.2646338801 0.02400193551376965 0.045959039120749993 1.7012080503460812e-07 6.769242570813053 -0.15947885963893227 RSS(ph)NPPAR ddPTM_A549_PD325901_60min_R1 2 RSSNPPAR 8 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 RS(0.354)S(0.646)NPPAR;RS(0.217)S(0.783)NPPAR 108.9 0.00071691 123838000.0 2637.5 2685.26 1891.8400000000001 1976.6399999999999 2217.34 1564.44 1033.56 1490.31 1991.17 2995.76 3013.77 True False 2905.2570583751203 2911.556284120791 2020.2316389580901 2098.732563524849 2061.6016878077307 1551.6997193284285 1072.8926913857338 1460.5845979244227 1907.4880493801966 2806.607202340399 2643.095395862092 1.0991873630151436 1.101570638986012 0.7643430661340758 0.794043441190404 0.7799951870958872 0.5870766986911248 0.4059228028868746 0.5526038145316459 0.7216871749564816 1.0618637551767118 1.0 11.36801278102011 -5.7599268157344605 24.733148222391428 0.7793660938985287 1.100379135510507 0.3549674875860973 0.1809348715376173 33.528471935009215 548184.6376013828 0.02838777958982073 0.09937047594623984 1.7380936954537022e-06 5.7599268157344605 0.3210130416119783 RSS(ph)NVSYK ddPTM_A549_MK2206_60min_R1 1 RSSNVSYK 8 1 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 RS(0.159)S(0.841)NVSYK 63.623999999999995 0.0041006 2698600.0 1290.1 1404.3 1344.0 1374.4 2207.1 1421.5 1353.5 1628.3 2064.6 2513.8 1971.4 True False 1507.837340083271 1475.7728717497334 1534.5994095765388 1711.1280616991605 1882.4385137276897 1571.922186484667 1599.4134300122216 1859.1165114596122 1596.9713964887205 1945.9308340900782 1481.8469721279162 1.0175391713477897 0.9959009934949893 1.035599112756475 1.1547265634601926 1.270332597855586 1.0607857734644515 1.0793377859493016 1.2545941291022387 1.0776898198843616 1.3131793435429724 1.0 10.53318075528074 -9.864171240650881 1.1706363226154188 1.0132171942572439 1.106778699907991 0.0 0.12439015961754143 0.5702472793056915 1.5827149151202404 0.027219609061816575 0.016980688214756633 1.367189641664337e-10 9.864171240650881 0.09356150565074706 RSS(ph)NVSYK ddPTM_A549_PD325901_60min_R1 2 RSSNVSYK 8 1 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 RS(0.168)S(0.832)NVSYK;RS(0.133)S(0.867)NVSYK 65.5 0.0037311999999999996 9989600.0 4650.2 5139.200000000001 5141.4 5234.200000000001 5724.700000000001 5511.7 5478.1 5429.4 5927.3 5379.0 5660.3 True False 5122.284880703691 5572.298420023969 5490.3263217497915 5557.50464626931 5322.616821142859 5466.814542598312 5686.572093231345 5321.106357718099 5678.196193740987 5039.369022014119 4964.118983598018 1.0318618263640074 1.1225150804071058 1.1060021606835815 1.1195349395596483 1.0722178172459922 1.1012658158801703 1.1455350107482094 1.0719135410129383 1.1438477225268688 1.0151587902434924 1.0 12.277321980104086 -10.91988933574913 1.1301580876654302 0.9989891416649129 1.1058860696578368 0.5548407799644872 0.03224481021355352 0.2684852010360846 0.599615885804286 0.022827711718796658 0.005188711996586107 1.202570827286875e-11 10.91988933574913 0.10689692799292383 RSS(ph)PAQTR ddPTM_A549_MK2206_60min_R1 1 RSSPAQTR 8 1 B3KT28;Q9UNN5 B3KT28 FAF1 FAS-associated factor 1 1 RS(0.126)S(0.874)PAQTR 62.823 0.0081831 15901000.0 740.1 463.16 372.72 237.15 362.73 270.35 334.3 273.84 284.62 823.17 825.48 True False 865.0107862922484 486.73286568369053 425.57730054863663 295.251760646068 309.3728975055256 298.95825755619404 395.03798275070983 312.6576585998281 220.15402444474466 637.215325283606 620.4905339110037 1.3940757175456218 0.7844323790336858 0.6858723498426114 0.475836043436588 0.4985940648530484 0.4818095381275765 0.636654326151847 0.5038878782390454 0.35480641913599464 1.0269541442754728 1.0 9.277265390809127 -5.210430448152252 2.1536184510842626 0.6302638341046553 1.6646979870959644 0.5410474040901732 0.20263816404003715 0.5599390120273139 2.5756572703028833 0.03419873881166268 1.1637601414830496 6.159841704948412e-06 5.210430448152252 1.034434152991309 RSS(ph)PDDGNDVSPYSLS(ph)PVSNK ddPTM_A549_PD325901_60min_R1 1 RSSPDDGNDVSPYSLSPVSNK 21 1 K7EQT1;Q9UM11-2;Q9UM11 K7EQT1 FZR1 Fizzy-related protein homolog 2 RS(0.464)S(0.536)PDDGNDVS(0.001)PY(0.01)S(0.068)LS(0.918)PVS(0.003)NK 89.65899999999999 7.170300000000001e-07 7421100.0 2580.5 2731.0 2632.2 2651.1 2884.8 3136.8 2601.9 2713.5 3165.5 3160.5 3046.2 True False 2842.470460336304 2961.1509544453324 2810.83692070444 2814.852425915054 2682.181600019725 3111.2549408027257 2700.916728314313 2659.377113800429 3032.4650433227753 2960.9454906256938 2671.536711452799 1.063983305245523 1.1084073603596634 1.052142352622169 1.0536454220703255 1.003984556349644 1.164593743917075 1.010997422096265 0.9954484632008828 1.135101393262794 1.1083304518826966 1.0 11.383454127039691 -11.185739793644181 1.609012737324671 1.0000462013823648 1.0742312485776995 0.0 0.06045065181775726 0.5004234401316089 2.330930574627883 0.03876176964720783 0.00816512029308235 6.520189324214298e-12 11.185739793644181 0.0741850471953347 RSS(ph)PESDR ddPTM_A549_MK2206_60min_R1 5 RSSPESDR 8 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 RS(0.141)S(0.859)PESDR;RS(0.137)S(0.846)PES(0.017)DR;RS(0.102)S(0.898)PESDR;RS(0.135)S(0.864)PES(0.001)DR;RS(0.232)S(0.762)PES(0.006)DR 69.01 0.0030402 197638000.0 3567.74 2572.7200000000003 2185.04 769.6089999999999 531.53 573.517 343.44399999999996 607.98 547.518 4715.700000000001 5538.34 True False 4169.887289131611 2703.6604590244074 2494.9115282002394 958.163239549061 453.34264111353315 634.2061882702269 405.84332918885667 694.1630268606614 423.5060472065833 3650.4200948041107 4163.017327592027 1.0016502361145727 0.64944732300412 0.5993036617129207 0.2301607618105404 0.10889761090083083 0.15234291341205264 0.09748778283937738 0.16674516876493023 0.10173055115568008 0.8768688207492009 1.0 12.023413848035501 -10.871582825387067 1.1284254821321416 0.9986864733537755 0.3171489652804608 0.39456060775519375 0.2805544059222724 0.3973810827579223 0.901134925383664 0.2103362123723572 0.051262785636877126 1.3440554140569783e-11 10.871582825387067 -0.6815375080733146 RSS(ph)PESDR ddPTM_A549_PD325901_60min_R1 6 RSSPESDR 8 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 RS(0.153)S(0.847)PESDR;RS(0.106)S(0.893)PES(0.001)DR;RS(0.214)S(0.785)PES(0.001)DR;RS(0.223)S(0.774)PES(0.004)DR;RS(0.092)S(0.908)PESDR;RS(0.009)S(0.991)PESDR 132.32 0.00086406 517796000.0 7203.18 7215.01 5113.969999999999 5380.71 5336.85 3750.6459999999997 3562.2 3735.5899999999997 5242.93 7635.52 9869.150000000001 True False 7934.44153089915 7823.044213779796 5461.034756999806 5713.064236220962 4962.008067132998 3720.101982498716 3697.761470310634 3661.080726936334 5022.587884880202 7153.411964114009 8655.30711569641 0.9167140373921603 0.90384363133605 0.6309463874593442 0.6600648780977757 0.573290814618743 0.4298058905099169 0.42722475596559006 0.4229868077467707 0.58028996750118 0.8264769659231718 1.0 13.079369296216024 -10.597747873985485 0.9681483533422282 0.9914990091848956 0.610752495080191 0.3000659818642517 0.16838713851155424 0.4367385265508272 0.753591713423158 0.10875017614672645 0.03255558185976598 2.5249461833771445e-11 10.597747873985485 -0.3807465141047046 RSS(ph)PPGHYYQK ddPTM_A549_PD325901_60min_R1 1 RSSPPGHYYQK 11 1 D6RDK6;D6RBN5;Q9NX40;D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4 D6RDK6 OCIAD1 OCIA domain-containing protein 1 1 RS(0.394)S(0.6)PPGHY(0.006)YQK 68.972 0.0015947000000000001 53451000.0 4877.6 5143.9 4488.2 4664.3 6069.7 5224.2 4680.2 4801.8 4678.9 5094.7 5228.7 True False 5372.770361300662 5577.39450551862 4792.796241739102 4952.403217606117 5643.385211328251 5181.6558472779925 4858.3075721037085 4706.0243320607715 4482.26210431304 4773.01977253306 4585.603047460196 1.1716605876464712 1.216283757620002 1.0451834125489041 1.079989516395031 1.2306746033008513 1.1299835144142991 1.0594697189924789 1.0262607302364022 0.9774640451697204 1.040870682249016 1.0 12.162895758148826 -8.030886044013757 1.8593328654007522 0.9903446550155793 1.1459532367964451 0.5825324962012973 0.05309187823410815 0.15500470533645136 1.0690105338393048 0.008732839750446248 0.012177861111437831 9.31352224043629e-09 8.030886044013757 0.15560858178086578 RSS(ph)PPPPPSGSSSR ddPTM_A549_MK2206_60min_R1 2 RSSPPPPPSGSSSR 14 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RS(0.099)S(0.901)PPPPPSGSSSR;RS(0.03)S(0.97)PPPPPSGSSSR 115.29 1.6814e-06 99649000.0 3377.7 3739.3 3314.5 3039.3999999999996 4024.5 3370.2 2588.2 2893.6 4422.5 5207.299999999999 5486.9 True False 3947.773183163527 3929.614398158353 3784.5459397629747 3784.0531364438516 3432.5013812229136 3726.8323270422957 3058.44243779655 3303.7766612783485 3420.8108112812993 4030.967313373082 4124.351299263803 0.9571864510833993 0.9527836289939194 0.9176099864331431 0.9174905001713373 0.8322524276328291 0.9036166069819356 0.7415572088494212 0.8010415266682236 0.8294179043118645 0.9773578972510439 1.0 12.009951506825086 -6.0227513862800865 1.8452004610546417 0.8889004048409885 0.9570726625616011 0.14243853722477728 0.07210886024491948 0.8094419789736021 5.184550504261517 0.01287019889378 0.05658275997670332 9.489615449064712e-07 6.0227513862800865 0.06817225772061253 RSS(ph)PPPPPSGSSSR ddPTM_A549_PD325901_60min_R1 1 RSSPPPPPSGSSSR 14 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RS(0.163)S(0.837)PPPPPSGSSSR 88.149 3.2419e-05 63954000.0 1557.5 1966.4 1265.4 1335.3 1712.5 1423.7 1578.3 1444.3 1572.8 1565.2 1831.6 True False 1715.6162534291 2132.115429081401 1351.2776534683524 1417.77844831367 1592.2199078042772 1412.1058592262314 1638.3630701788984 1415.4923034685683 1506.7006855593313 1466.3730048812977 1606.3248114690255 1.0680381957495413 1.327325217078311 0.8412231721880546 0.8826225170593456 0.9912191459883827 0.8790911085627969 1.0199450686941536 0.8811993025084783 0.937980086469196 0.9128745284960529 1.0 10.64954793126246 -5.764322372994609 24.999999261519765 0.9503936601257901 1.19768171092026 0.6194628919268172 0.08007084020139177 31.861446864792228 276300.83717585064 0.01017578480475503 0.033793355447704475 1.7205909212603518e-06 5.764322372994609 0.24728805079446992 RSS(ph)PSARPPDVPGQQPQAAK ddPTM_A549_MK2206_60min_R1 3 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.122)S(0.872)PS(0.006)ARPPDVPGQQPQAAK;RS(0.299)S(0.698)PS(0.003)ARPPDVPGQQPQAAK;RS(0.109)S(0.87)PS(0.021)ARPPDVPGQQPQAAK 143.47 1.4690999999999999e-21 308640000.0 8483.5 9769.8 9597.400000000001 8472.4 12216.0 10367.9 8531.8 8944.3 13237.0 13713.4 14378.4 True False 9915.307398338451 10267.041089810262 10958.45563502224 10548.138380340488 10419.042582437347 11465.024296344982 10081.917622592004 10212.18191576995 10238.840635145401 10615.53341563007 10807.846456347785 0.917417492780431 0.9499617829766733 1.0139351700898747 0.9759704139898506 0.9640257774311661 1.0608056232711573 0.9328331655443328 0.944885917561497 0.947352525454487 0.9822061646143425 1.0 13.399791463559668 -5.524651417935335 24.792543355337163 0.9769698644719272 0.9255535488081221 0.2307193743315007 0.03443311377264805 49.96054920934358 698772.9969296085 0.004857598921908025 0.01909801335040497 2.9877797679175023e-06 5.524651417935335 -0.05141631566380511 RSS(ph)PSARPPDVPGQQPQAAK ddPTM_A549_PD325901_60min_R1 6 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.11)S(0.741)PS(0.149)ARPPDVPGQQPQAAK;RS(0.064)S(0.783)PS(0.153)ARPPDVPGQQPQAAK;RS(0.403)S(0.596)PS(0.001)ARPPDVPGQQPQAAK;RS(0.114)S(0.886)PS(0.001)ARPPDVPGQQPQAAK;RS(0.407)S(0.585)PS(0.008)ARPPDVPGQQPQAAK;RS(0.15)S(0.822)PS(0.028)ARPPDVPGQQPQAAK 124.81 2.5745e-15 688698000.0 22673.100000000002 23177.300000000003 23201.6 24270.3 28270.6 26968.8 26490.8 27062.100000000002 27197.8 29344.300000000003 30470.6 True False 24974.856420945962 25130.532411741435 24776.200098554855 25769.421309149453 26284.970584275405 26749.175034277127 27498.92189032199 26522.32518569324 26054.771048897226 27491.495890070433 26722.90936904788 0.9345859792449612 0.9404115421971668 0.9271520460737024 0.964319451646129 0.9836118598194356 1.000982889432678 1.0290392228839027 0.9924939241987263 0.9749975457041914 1.028761333970349 1.0 14.705789464599581 -6.565522215083964 2.3407907821348295 0.9923672136483866 0.9345868822235387 0.7376999124750725 0.017253753537039063 0.12054726043242782 1.323093940885578 0.0023342530135340564 0.005774316036044075 2.719429377960047e-07 6.565522215083964 -0.05778033142484795 RSS(ph)PVPPVPER ddPTM_A549_MK2206_60min_R1 2 RSSPVPPVPER 11 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 RS(0.056)S(0.944)PVPPVPER;RS(0.246)S(0.754)PVPPVPER 84.954 0.00037984 17340900.0 9708.1 11321.7 10054.7 9634.8 14076.6 11975.599999999999 10771.7 10491.7 15694.099999999999 16183.1 16755.7 True False 11346.589939742971 11897.92617110942 11480.607651390792 11995.326432522601 12005.95078715927 13242.85004324009 12728.778458856785 11978.930604483694 12139.411408327824 12527.326470348922 12594.797256205606 0.9008950052095814 0.9446699243409553 0.911535725256249 0.9524032970528653 0.9532468481176858 1.0514540070674963 1.0106378213103164 0.9511015033276168 0.9638433363702296 0.994642963718734 1.0 13.62054027813443 -6.717969383659171 2.3021840516853858 0.9865099006503544 0.9229777136526528 0.5547340562688016 0.028094387303348987 0.20103906598635227 2.169175602914438 0.0043996084566913654 0.010052828479200492 1.914390878561008e-07 6.717969383659171 -0.06353218699770158 RSS(ph)PVYVGR ddPTM_A549_PD325901_60min_R1 1 RSSPVYVGR 9 1 P21980-2;P21980;A2A299;P21980-3 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 1 RS(0.194)S(0.806)PVYVGR 74.962 0.00088282 50397000.0 1353.5 1257.9 1085.8 1352.9 1386.9 1157.8 1168.4 1301.0 1241.9 1248.9 1453.4 True False 1490.9063236059628 1363.907647600434 1159.4889174458176 1436.4655603411707 1289.4889285452566 1148.371260667366 1212.8641013730123 1275.0505343852446 1189.7072618235838 1170.0442408613926 1274.6410138616955 1.1696676220146587 1.0700327643375396 0.9096591941075165 1.126956958641403 1.011648703063914 0.9009370075016037 0.9515338736029514 1.0003212830272177 0.9333665313492515 0.917940210723792 1.0 10.315875272573194 -2.000000018795766 0.6393460809360132 0.9694131480879511 17.528209505968 0.47928505810248345 0.06208919884637908 121.04726508972692 0.7484140795905907 0.00986961105401368 2836.849784804805 0.009999999567211508 2.000000018795766 16.55879635788005 RSS(ph)QLK ddPTM_A549_MK2206_60min_R1 2 RSSQLK 6 1 A0A1B0GVW3;F5H7N0;P28472-4;P28472-3;P28472-2;P28472 A0A1B0GVW3 GABRB3 Gamma-aminobutyric acid receptor subunit beta-3 1 RS(0.003)S(0.997)QLK;RS(0.13)S(0.87)QLK 116.73 0.0080146 29123000.0 4328.5 4452.7 3160.6 2694.16 9712.5 8613.400000000001 8319.2 9810.7 10320.3 5235.6 4691.9 True False 5059.044978335355 4679.323410980584 3608.8206055860214 3354.2293209454397 8283.804116070947 9524.864270887821 9830.69095453097 11201.396769008665 7982.7685281325885 4052.8743237178796 3526.771740147595 1.4344690700407037 1.3268007559754222 1.0232645806090621 0.9510763860223813 2.3488347776440643 2.700731709529125 2.7874474672181524 3.176104833067503 2.2634775132338194 1.1491739818546542 1.0 11.784132489285437 -6.753791574872549 24.992991749184515 1.9508891515246962 1.182635491501633 0.31746512897712376 0.6557078239257306 255.9206320487826 836340.2771981403 0.1188924685666049 0.24383042670811525 1.7628218508916488e-07 6.753791574872549 -0.7682536600230632 RSS(ph)QLK ddPTM_A549_PD325901_60min_R1 2 RSSQLK 6 1 A0A1B0GVW3;F5H7N0;P28472-4;P28472-3;P28472-2;P28472 A0A1B0GVW3 GABRB3 Gamma-aminobutyric acid receptor subunit beta-3 1 RS(0.017)S(0.983)QLK;RS(0.135)S(0.865)QLK 84.568 0.016909999999999998 25144000.0 3240.0 3330.7 2924.7 2558.3 3281.5 2512.7 2310.6 2623.8 2740.7 3714.1 3616.5 True False 3568.9224148380663 3611.3897780926645 3123.1877296498283 2716.3203806791435 3051.018760560429 2492.23740428303 2398.531147408835 2571.4662506687196 2625.517910040983 3479.5910921477293 3171.6934268823616 1.1252419242632046 1.1386314161020619 0.9847066879726102 0.8564258946518579 0.9619526069893362 0.7857750005594937 0.7562304499796779 0.8107549830868618 0.8277968758858748 1.097076742239876 1.0 11.631037612799958 -5.924300046150301 2.914792237588275 0.888142580522808 1.1355258882467338 0.4915090904186673 0.09575638784424739 0.15783836760946832 2.6707841150852514 0.013105181660317244 0.0492109382167863 1.1904192848480565e-06 5.924300046150301 0.2473833077239258 RSS(ph)RS(ph)SPELTR ddPTM_A549_PD325901_60min_R1 2 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RS(0.462)S(0.537)RS(0.537)S(0.462)PELT(0.002)R;RS(0.39)S(0.599)RS(0.538)S(0.468)PELT(0.005)R 64.675 0.005030399999999999 232200000.0 3676.9 3796.5 4086.2 3431.5 4553.0 3885.5 3727.2 3894.5 3750.5 4467.4 4778.7 True False 4050.176181209286 4116.44437881791 4363.514104316724 3643.455961498061 4233.2129869973005 3853.85777623342 3869.0406356020967 3816.821142323853 3592.8795277150753 4185.327601588746 4190.950194675165 0.9664100008526132 0.9822222139619031 1.0411753663550598 0.8693627440687016 1.0100842983951068 0.919566589249846 0.9231893618105812 0.9107293012389734 0.8572947328937548 0.9986583965866349 1.0 12.033061661219595 -7.290554369168162 24.034097279378138 0.927618322768879 0.972251355021957 0.10479720623478483 0.05435769629728683 788.3722571001036 650790.5018201654 0.009320529694404415 0.014901718789891107 5.1220714322471955e-08 7.290554369168162 0.04463303225307802 RSS(ph)SEGLSK ddPTM_A549_MK2206_60min_R1 2 RSSSEGLSK 9 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 RS(0.142)S(0.846)S(0.013)EGLSK;RS(0.065)S(0.922)S(0.012)EGLSK 95.66 0.00038204 176913000.0 13092.5 13602.8 12294.400000000001 11000.5 13996.1 11747.0 11475.8 10795.900000000001 14551.0 18469.1 15992.9 True False 15302.193919107225 14295.124417743562 14037.9307895073 13695.622993831214 11937.292230521556 12990.059742972484 13560.804314838759 12326.251886057125 11255.221733172224 14296.917482652976 12021.421548414608 1.2729105170698625 1.1891376040821737 1.1677429938690262 1.1392681754544578 0.9930017163482511 1.0805760109698193 1.1280533055283437 1.0253572621519722 0.9362637927505811 1.189286759895585 1.0 13.553319886212932 -5.506030292594984 0.34896606688622495 0.9679307290754877 1.450784426156048 0.31843604395818026 0.08138465359031377 1.9301234406781007 0.18032781821652152 0.017028462945613942 0.3802310569413612 3.1186720451475333e-06 5.506030292594984 0.48285369708056036 RSS(ph)SEGLSK ddPTM_A549_PD325901_60min_R1 3 RSSSEGLSK 9 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 RSS(0.97)S(0.029)EGLSK;RS(0.037)S(0.925)S(0.037)EGLSK;RS(0.013)S(0.986)S(0.001)EGLSK 136.01 3.6077e-05 166524000.0 23764.800000000003 24214.7 24031.300000000003 24015.7 28774.2 27243.2 25876.2 24973.699999999997 27434.7 29080.7 29708.9 True False 26177.385001278908 26255.357750497045 25662.208529946292 25499.09524538801 26753.199457601084 27021.340411654175 26860.932950999948 24475.579962011343 26281.71496573918 27244.539639056675 26054.893640233753 1.0047012804096043 1.0076939139737549 0.9849285467939474 0.9786681764078482 1.0268013305680517 1.0370927160465566 1.0309361965508665 0.939385141999442 1.008705517229791 1.0456592153186102 1.0 14.669266745045432 -6.73961740381939 24.982487199134617 1.0051299980209316 0.9943284585426669 0.052772612757551074 0.02825398073983107 763.7502812427467 874359.6196544712 0.0036657565844758454 0.0076236562174630505 1.8213046490894597e-07 6.73961740381939 -0.010801539478264677 RSS(ph)SGSGGGGTAGAR ddPTM_A549_MK2206_60min_R1 1 RSSSGSGGGGTAGAR 15 1 Q9NWM3-2;Q9NWM3 Q9NWM3-2 CUEDC1 CUE domain-containing protein 1 1 RS(0.144)S(0.838)S(0.017)GSGGGGTAGAR 106.67 1.9062999999999999e-06 23019000.0 370.29 354.06 165.69 239.15 378.42 469.49 281.19 401.36 283.37 374.61 505.09 True False 432.78589927868757 372.08014168746735 189.1873334618578 297.7417607358517 322.7549192899428 519.1711201777601 332.27858321768485 458.2540091134491 219.18714744890494 289.98534082205595 379.66221322516446 1.139923553630072 0.9800294280716305 0.4983043528476124 0.7842280594810509 0.8501107248682872 1.3674553381741412 0.8751952963531348 1.207004524418327 0.5773214710701606 0.7637982678304509 1.0 8.568572608259162 -4.389343603411728 17.134222429354786 0.8685421770136471 0.8810117187153256 0.0 0.25355279283549 0.0 0.0 0.03520581899468471 0.0 4.079964615576383e-05 4.389343603411728 0.012469541701678466 RSS(ph)SGSGGGGTAGAR ddPTM_A549_PD325901_60min_R1 2 RSSSGSGGGGTAGAR 15 1 Q9NWM3-2;Q9NWM3 Q9NWM3-2 CUEDC1 CUE domain-containing protein 1 1 RS(0.14)S(0.827)S(0.026)GS(0.005)GGGGT(0.002)AGAR;RS(0.228)S(0.739)S(0.033)GSGGGGTAGAR 172.99 1.0639000000000003e-27 28850300.0 1220.3899999999999 1041.37 896.1 755.18 1151.33 1036.6 792.28 847.36 1160.49 1489.94 1361.63 True False 1344.2830943963652 1129.1299045883331 956.9147346870479 801.8257534617812 1070.4645526728757 1028.1582732836348 822.4306489522511 830.4587400589392 1111.718641012683 1395.8649341252487 1194.1581420837356 1.125716140117481 0.9455447019923743 0.8013299922046239 0.6714569245097157 0.896417748159367 0.860990045664772 0.6887116705641332 0.6954344745410668 0.9309643353206131 1.1689112898309655 1.0 10.22177818968383 -8.966365021826356 12.183937773743855 0.9695860388003661 0.829595961249909 0.260269585460673 0.13846321822272054 0.975619306179801 351.32107599025767 0.022617984259408783 0.023766519795499735 1.0805253946210974e-09 8.966365021826356 -0.13999007755045711 RSS(ph)SYER ddPTM_A549_PD325901_60min_R1 1 RSSSYER 7 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 RS(0.062)S(0.469)S(0.469)YER 56.916000000000004 0.029291 8771100.0 731.93 724.09 773.02 912.12 680.8 568.91 754.45 715.07 778.04 838.72 1207.2 True False 806.2349947816125 785.1116054940763 825.4817857468829 968.4595808251815 632.9829566324975 564.2769855815089 783.1610076008815 700.8073678884368 745.341684506982 785.7630760631498 1058.722053071308 0.761517144601606 0.7415653647871986 0.7796964116806626 0.914743938709618 0.5978745363773623 0.5329793442429628 0.7397229568695244 0.6619370644593869 0.7040012837597718 0.7421807015199923 1.0 10.048108172115596 -10.584687338964597 0.8281194788735813 1.0039966787659482 0.7139352310320877 0.0725045092044091 0.11990394199145311 0.4036878370488228 0.4849907688681413 0.07228306091246682 0.018920676563895296 2.6020321664909886e-11 10.584687338964597 -0.29006144773386056 RSS(ph)TGSYEER ddPTM_A549_PD325901_60min_R1 1 RSSTGSYEER 10 1 Q7Z674;H7C434;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 RS(0.02)S(0.972)T(0.008)GSYEER 122.46 1.5131e-05 11617000.0 933.27 726.52 853.97 1119.5 737.64 727.44 759.24 637.01 688.46 642.93 918.62 True False 1028.0148833629387 787.7463901221613 911.9255395387776 1188.6489724310297 685.8307111198528 721.5159698219635 788.1332936720696 624.3043358253221 659.5264203841406 602.3352900768797 805.6355636119655 1.2760296712249934 0.9777949555632818 1.1319330733741126 1.4754177026419637 0.8512915046165753 0.8955860471043974 0.978275201927002 0.7749215203786838 0.8186411451689608 0.7476523099059647 1.0 9.653983560202535 -6.799641453349076 24.999936641116687 0.9016258190009835 1.192375891286002 0.5971262850260746 0.1353715919470544 95.14366660900913 62262.99535558216 0.019101600813020453 0.03609913028958215 1.586202195469327e-07 6.799641453349076 0.2907500722850186 RSS(ph)TS(ph)GDTEEEEEEEVVPFSSDEQK ddPTM_A549_MK2206_60min_R1 2 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.436)S(0.497)T(0.233)S(0.494)GDT(0.341)EEEEEEEVVPFSSDEQK;RS(0.441)S(0.479)T(0.19)S(0.537)GDT(0.353)EEEEEEEVVPFSSDEQK 97.469 1.6962e-09 8601900.0 704.4200000000001 582.52 565.0 772.52 870.23 1126.78 594.03 530.72 1237.44 989.78 1117.5 True False 823.3088745844964 612.1677798559105 645.1254958413277 961.7874346797403 742.2203197867101 1246.01511170397 701.9575617511343 605.9511852618347 957.1618157856258 766.1880105679356 839.9939085690098 0.9801367202615343 0.7287764513659181 0.7680121120644143 1.1449933444377167 0.8836020264136628 1.4833620803591856 0.8356698240192832 0.7213756898476993 1.1394866153448897 0.9121351985435134 1.0 9.714235055631425 -6.253768256808157 24.81288895169732 1.0471746002041287 0.8159552180603709 0.13599207617309428 0.20074861439355873 622.889065680848 2014779.565334465 0.02636831233991156 0.06833495992599502 5.574831472785478e-07 6.253768256808157 -0.2312193821437578 RSS(ph)TSGDT(ph)EEEEEEEVVPFSSDEQK ddPTM_A549_PD325901_60min_R1 2 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.332)S(0.472)T(0.179)S(0.034)GDT(0.983)EEEEEEEVVPFSSDEQK;RS(0.257)S(0.556)T(0.177)S(0.104)GDT(0.906)EEEEEEEVVPFSSDEQK 197.89 2.9994999999999996e-68 143367000.0 3430.7 4346.9 3526.4 3575.4 4874.700000000001 4483.9 4205.0 4412.5 5057.3 6272.0 5999.5 True False 3778.982138452144 4713.228518446879 3765.722709965858 3796.244337677449 4532.317888802055 4447.384605032307 4365.023576064294 4324.489225960712 4844.759268234488 5875.98484961378 5261.599533963978 0.7182192628037465 0.8957786483031772 0.7156992252370911 0.721500052060678 0.8613954481989059 0.8452533447907127 0.8296001145445931 0.8218963070157362 0.9207768924566081 1.11676778357682 1.0 12.361285732263141 -8.831606266455545 0.44220195964957704 1.002237403603038 0.7704705836382313 0.6818175939619655 0.06656672822490356 0.3615918812889948 0.177424392860937 0.026875682737076852 0.023885924194464614 1.473647913548096e-09 8.831606266455545 -0.23176681996480664 RSS(ph)TSGDT(ph)EEEEEEEVVPFSSDEQKR ddPTM_A549_MK2206_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.411)S(0.449)T(0.219)S(0.214)GDT(0.707)EEEEEEEVVPFSSDEQKR 71.068 5.1339e-05 10915000.0 234.79 0.0 0.0 120.28 176.43 185.55 120.04 356.28 187.77 270.28 386.96 True False 274.41681193562636 0.0 0.0 149.7486053995744 150.47738071540778 205.18477784187834 141.8497141770721 406.7837810617395 145.24039480707506 209.22356028238758 290.8671524473055 0.9434438011536578 0.0 0.0 0.5148350514646145 0.5173405778181459 0.7054243702511246 0.4876786979333119 1.3985208630095618 0.4993358431333607 0.7193096866456629 1.0 8.184216572231882 -7.10530228579346 1.2998964907574588 0.7959646043235176 0.2997657863256444 0.2864820449964386 0.3315460122141991 0.43071037982412574 1.4314066539887773 0.05417506208809869 0.12053411893672537 7.846892703386149e-08 7.10530228579346 -0.4961988179978732 RSS(ph)TSGDT(ph)EEEEEEEVVPFSSDEQKR ddPTM_A549_PD325901_60min_R1 2 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.384)S(0.415)T(0.167)S(0.171)GDT(0.862)EEEEEEEVVPFS(0.001)S(0.001)DEQKR;RS(0.388)S(0.42)T(0.155)S(0.165)GDT(0.871)EEEEEEEVVPFSSDEQKR 61.583 0.014466999999999999 33967000.0 1082.1799999999998 1223.1100000000001 1790.42 1474.21 1458.88 1746.3200000000002 1574.12 1308.95 1725.9499999999998 2239.88 1804.04 True False 1192.0421169411907 1326.185772204919 1911.9286678700869 1565.2686035261704 1356.4133016627773 1732.0985489105506 1634.0239979915161 1282.8419653985904 1653.4143236528018 2098.4535945396865 1582.1545167517907 0.7534296456634892 0.8382150783398937 1.2084335933226877 0.9893272666817098 0.8573203737695186 1.094772053279979 1.0327840806258386 0.8108196461318471 1.0450397266174163 1.3263265833528528 1.0 10.627674788180585 -5.540390113479391 24.652909163055458 1.0100445104134723 0.7746259142277596 0.30408799099527917 0.13892695080260956 111.69752032726811 157250.41731560192 0.012975792094784576 0.05027721700927156 2.881442028838565e-06 5.540390113479391 -0.2354185961857127 RSS(ph)TSSEPTPTVK ddPTM_A549_MK2206_60min_R1 2 RSSTSSEPTPTVK 13 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 RS(0.016)S(0.981)T(0.003)SSEPTPTVK;RS(0.118)S(0.834)T(0.047)SSEPTPTVK 196.18 1.977e-30 19622400.0 5367.1 5139.0 4763.9 3649.7 5584.0 4083.9 3416.2 3749.1 5060.9 5690.4 6000.9 True False 6272.9352670032795 5400.55314955628 5439.492654227441 4543.876663841261 4762.600997080073 4516.055587326579 4036.8793199909524 4280.546406137219 3914.6142305966146 4404.934687845561 4510.71091358548 1.3906755248070288 1.19727316891241 1.2059058446518112 1.0073526658859675 1.055842657248538 1.0011848850089244 0.8949541208310582 0.9489737844305106 0.8678486175663518 0.9765499878475166 1.0 12.139139112971426 -5.565983691795041 0.619089350944203 0.9347984511514548 1.551475169291681 0.8849088391015376 0.050278490953731846 0.6398671782154854 0.2065856253493709 0.010294107697099375 0.2586566945695364 2.7165412758457832e-06 5.565983691795041 0.6166767181402263 RSS(ph)YLLAITTER ddPTM_A549_MK2206_60min_R1 1 RSSYLLAITTER 12 1 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 RS(0.194)S(0.806)YLLAITTER 91.65700000000001 0.00011259 4730400.0 337.78 442.88 344.1 331.25 680.66 454.31 421.17 442.17 659.64 632.45 933.01 True False 394.7890060718761 465.4207003065742 392.89855419292195 412.4062648703776 580.53581566485 502.38478265342883 497.69113728721624 504.8489515888328 510.23259322862526 489.57910574439865 701.3178672339798 0.5629244947500577 0.663637306350412 0.5602289240719426 0.5880447142989828 0.827778447958986 0.7163439092673491 0.709651301556206 0.7198575356135918 0.7275340000120046 0.698084461579903 1.0 9.453924673298994 -14.999999999999998 0.12924315149706342 2.1358488816153978 0.5302380990232554 0.18166795504715927 0.10893941339631052 22.411421457681048 0.19847276097398298 6.546421496407569 0.19267393117000664 1.000000000000004e-15 14.999999999999998 -1.6056107825921424 RSSAWAEGGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RSSAWAEGGSPR 12 1 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 RSSAWAEGGS(1)PR;RSSAWAEGGS(1)PR 89.866 0.00011458 10715700.0 2033.39 1858.23 2060.01 2234.1 3198.3999999999996 2032.88 2209.63 1952.53 3335.0 3580.6 3318.5 True False 2376.5765203875076 1952.8059698579414 2352.1503941382207 2781.454600292559 2727.919596894861 2247.9980122834677 2611.0911690860044 2229.3071068723425 2579.62782490065 2771.739973165301 2494.424864059292 0.952755304290864 0.7828682266580885 0.942963016456811 1.1150685035131387 1.0936066410337142 0.9012089498760038 1.046770823490292 0.8937158777532745 1.034157357100227 1.1111739676354577 1.0 11.284491498453566 -5.998516325790379 24.979132601568356 1.0130910118544818 0.8665876880922754 0.36841645122801847 0.0794605456732038 34.543613453809996 581523.3845152839 0.009367214107907303 0.02882176041801862 1.003422128274284e-06 5.998516325790379 -0.14650332376220643 RSSDT(ph)SGNEASEIESVK ddPTM_A549_MK2206_60min_R1 1 RSSDTSGNEASEIESVK 17 1 Q09GN1;Q71F23-3;Q71F23;D6R9S4 Q09GN1 MLF1IP;CENPU Centromere protein U 1 RS(0.136)S(0.136)DT(0.364)S(0.364)GNEASEIESVK 108.92 4.664499999999999e-09 3570000.0 1340.0 1569.5 1364.6 1163.4 2027.4 1648.1 1859.9 1239.2 2256.7 2093.2 2271.5 True False 1566.159240145404 1649.380846123483 1558.1207993364187 1448.4330522270113 1729.172145680541 1822.500848079762 2197.8197550644486 1414.8603948908383 1745.5610532093854 1620.3446662094632 1707.4238597892672 0.9172644690221804 0.9660055039450205 0.9125565338701102 0.8483148715081088 1.0127374850518711 1.0673980204919344 1.2872139173079769 0.8286521163324158 1.0223361019593724 0.9489996622218039 1.0 10.737605529617488 -6.867276240899738 8.111834496584542 1.022897331810631 0.91530935385444 0.209081419214747 0.10559640281658697 0.3042225556126757 21.175342697507322 0.014509222409577643 0.02750679249933112 1.357449741345116e-07 6.867276240899738 -0.1075879779561909 RSSFS(ph)EGQTLTVTSGAK ddPTM_A549_PD325901_60min_R1 1 RSSFSEGQTLTVTSGAK 17 1 E9PEM3;H0Y6E6;Q92622-3;Q92622-2;Q92622;H7C357;H7C3H3 E9PEM3 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 RS(0.295)S(0.295)FS(0.409)EGQT(0.002)LTVTSGAK 72.568 0.00031326 38580000.0 3095.4 3387.6 3640.6 4035.3 3345.1 3418.2 3698.3 3546.7 3874.6 3852.6 3881.6 True False 3409.64272928696 3673.084940783234 3887.673008706249 4284.551316168765 3110.1517159685204 3390.3633125005995 3839.040830287412 3475.958286167675 3711.764036284452 3609.346178511172 3404.187807489719 1.0016024150563136 1.0789900994010675 1.1420265944648502 1.2586119093494534 0.9136251851691979 0.9959389740605076 1.1277406087410782 1.021082996220141 1.0903523090347775 1.0602664666649926 1.0 11.733094916709423 -6.768307612209551 24.999299949681745 1.0374282330225408 1.1189078390379865 0.23734513686672165 0.07722529164956775 203.42812244543816 740449.5551520773 0.011414896810652926 0.021917653981060978 1.7048743931014028e-07 6.768307612209551 0.08147960601544568 RSSPS(ph)ARPPDVPGQQPQAAK ddPTM_A549_PD325901_60min_R1 1 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.317)S(0.317)PS(0.366)ARPPDVPGQQPQAAK 50.215 0.0029362 7258000.0 1379.2 1275.4 1398.7 1223.3 2175.2 2208.7 1490.8 1759.0 1548.7 1970.5 1834.5 True False 1519.2153686866225 1382.88243401669 1493.6241930663714 1298.8604626841257 2022.4214560326232 2190.713079492152 1547.5332097970625 1723.9153650911944 1483.613524749324 1846.0822937123658 1608.8681298536408 0.9442758797296992 0.859537465101314 0.9283695570514203 0.8073131902999927 1.2570461298258195 1.3616486266599375 0.9618769749251246 1.0715081821205692 0.9221473762950906 1.1474416451274378 1.0 10.651830365724818 RSSRS(ph)S(ph)PELTR ddPTM_A549_PD325901_60min_R1 1 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RS(0.291)S(0.341)RS(0.513)S(0.854)PELTR 69.602 0.0011007999999999999 10993000.0 219.65 303.89 207.12 279.64 262.19 361.37 242.17 296.94 231.13 380.25 460.84 True False 241.9487063022163 329.49987680204777 221.17640871373888 296.912727691481 243.7746789063963 358.42712253184146 251.38591187050883 291.0172987550763 221.41640987622597 356.2409501061292 404.159601505452 0.5986464391814096 0.8152716787494233 0.5472501652562008 0.734642271482633 0.603164388519687 0.8868454966719538 0.6219966343348587 0.7200553881958204 0.547843992946037 0.8814363157009488 1.0 8.65878131154056 -10.92628704388116 1.1473357161721762 1.002453715882987 0.6697808184088705 0.4646743482780932 0.10783137188354643 0.27137132457400215 0.6269529126713701 0.0724233175584826 0.016557953855012793 1.1849852816006202e-11 10.92628704388116 -0.33267289747411644 RSSS(ph)DIAR ddPTM_A549_PD325901_60min_R1 1 RSSSDIAR 8 1 J3KQH6;P78364 J3KQH6 PHC1 Polyhomeotic-like protein 1 1 RS(0.067)S(0.314)S(0.619)DIAR 70.056 0.0054465 2668500.0 569.14 558.49 531.22 487.28 687.03 669.22 555.0 576.42 649.93 554.42 524.18 True False 626.9186738212765 605.5559123208252 567.2717836853632 517.3781789068262 638.7753829248311 663.7700941991837 576.1208287076535 564.9228509072577 622.6157022924566 519.4138265820907 459.70918305079346 1.3637288462693336 1.3172586814606162 1.2339796649715502 1.1254466910435001 1.3895206066707015 1.443891309271156 1.253228888934328 1.228870059019115 1.3543686427157222 1.129874811582131 1.0 8.844577675180075 -10.810954767644658 0.8476980798591931 0.9819335204438928 1.3018115428976718 0.4770357131716644 0.09194763095777178 0.3781233634225289 0.4361607626591913 0.08145758079719473 0.01618924089107138 1.5454153882513207e-11 10.810954767644658 0.31987802245377894 RSSS(ph)EDDDLDVES(ph)DFDDASINSYSVSDGSTSR ddPTM_A549_PD325901_60min_R1 1 RSSSEDDDLDVESDFDDASINSYSVSDGSTSR 32 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;F5H6N4 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 RS(0.359)S(0.374)S(0.39)EDDDLDVES(0.708)DFDDAS(0.156)INS(0.007)Y(0.004)S(0.001)VS(0.001)DGSTSR 41.266999999999996 0.015109000000000001 1556500.0 173.05 248.45 301.54 392.51 412.71 236.51 289.04 230.18 364.35 274.04 0.0 True False 190.61790860732322 269.38775343535065 322.00431770732337 416.7544512451124 383.7226733722065 234.58394097464063 300.039575368757 225.58887932728322 349.0376365612551 256.7370676320409 0.0 0.0 RSSS(ph)PAELDLKDDLQQTQGK ddPTM_A549_MK2206_60min_R1 2 RSSSPAELDLKDDLQQTQGK 20 2 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 RS(0.281)S(0.281)S(0.437)PAELDLKDDLQQTQGK;RS(0.01)S(0.01)S(0.981)PAELDLKDDLQQTQGK 205.38 4.5861e-56 21758000.0 2717.5 3679.6 3080.0 3792.4 4222.2 3786.8 3703.8 3718.8 4858.6 5512.7 5715.700000000001 True False 3176.147563503832 3866.8759231576714 3516.7903136129025 4721.538170247305 3601.1199731145175 4187.516662525601 4376.73251723625 4245.95128834736 3758.1348575898965 4267.377241263572 4296.333944705049 0.7392692477776841 0.9000408192019951 0.8185560896510655 1.098969081783387 0.8381843728774069 0.9746720614412296 1.0187132968633144 0.9882731051621854 0.8747306205611768 0.9932601367086084 1.0 12.068890419895457 -4.903356803213715 0.9974009662709984 0.9507677011186785 0.49092623610870073 0.41894009785663633 0.07687405411611188 2.7508847788982127 1.3056655988737025 0.01140516417762033 1.6021588552979715 1.2492322770374716e-05 4.903356803213715 -0.45984146500997775 RSSSAEES(ph)GQDVLENTFSQK ddPTM_A549_MK2206_60min_R1 1 RSSSAEESGQDVLENTFSQK 20 1 Q14789;Q14789-2;E7EU81;Q14789-4;Q14789-3;H0Y867 Q14789 GOLGB1 Golgin subfamily B member 1 1 RS(0.124)S(0.124)S(0.049)AEES(0.703)GQDVLENTFSQK 84.93299999999999 2.6470999999999998e-05 5414900.0 1926.7 2500.6 2232.3 1950.8 3300.9 2432.0 2300.3 2087.7 3677.5 3563.3 4337.0 True False 2251.8798567075733 2627.8698590738336 2548.873706843535 2428.7460875747383 2815.341982675789 2689.352625769054 2718.234734434515 2383.637868313105 2844.552121760764 2758.348055180672 3260.0032048893027 0.690760013158956 0.8060942563285198 0.7818623316138994 0.745013404874002 0.8636009861749162 0.8249539821726569 0.833813515998312 0.7311765414028311 0.8725611427297213 0.8461182035170223 1.0 11.670657667423848 -11.005621847110644 0.1923370824493348 1.1829073677053412 0.7275439231195194 0.2778039475109131 0.06768182994279737 3.5596873714430464 0.17405030538331567 0.4079671662117778 0.07113702687208494 9.871386419765114e-12 11.005621847110644 -0.4553634445858218 RSSSLGS(ph)YDDEQEDLTPAQLTR ddPTM_A549_MK2206_60min_R1 1 RSSSLGSYDDEQEDLTPAQLTR 22 1 E9PGM7;O94988-6;O94988-5;O94988-1;O94988;O94988-3 E9PGM7 FAM13A Protein FAM13A 1 RS(0.23)S(0.23)S(0.23)LGS(0.306)Y(0.003)DDEQEDLTPAQLTR 61.101000000000006 0.00060247 2655100.0 918.41 795.11 605.17 692.47 1024.4 701.15 774.78 942.43 1440.3 1596.4 1363.6 True False 1073.4151550312988 835.5777028106032 690.9922058730909 862.1251810861592 873.7121170144745 775.3452276142983 915.5474970852373 1076.0223385708293 1114.0743496864795 1235.7721312520484 1024.980486554543 1.047254234702134 0.8152132784687303 0.6741515716029397 0.8411137503545852 0.8524182932998512 0.7564487693035113 0.893234075277703 1.0497978768238436 1.086922496867647 1.205654300216074 1.0 10.001380728813329 -8.136010342922543 3.621251650162075 1.0429055391041206 0.8245844391676502 0.5772184773606126 0.09950850525296855 0.13224808428554416 3.156337540142875 0.014202059826260414 0.018618631653785314 7.311216712776987e-09 8.136010342922543 -0.21832109993647042 RSSSSSAAAST(ph)PPPGPPAPADPLGYLPLHGGYQYK ddPTM_A549_PD325901_60min_R1 1 RSSSSSAAASTPPPGPPAPADPLGYLPLHGGYQYK 35 1 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 RS(0.06)S(0.06)S(0.06)S(0.06)S(0.06)AAAS(0.343)T(0.355)PPPGPPAPADPLGYLPLHGGYQYK 47.871 0.0028609 5480100.0 1448.0 1158.2 1348.9 1422.2 1807.4 1356.2 2087.3 1656.3 1551.3 1560.7 1732.0 True False 1594.9998940387402 1255.8055787032533 1440.4444655946434 1510.0460639494506 1680.4544591915053 1345.155556846676 2166.733343714387 1623.2637971577858 1486.1042557910657 1462.1571356492711 1518.9749800526051 1.050050142355539 0.8267454008095395 0.9483003239097183 0.9941217490607743 1.1063081889165205 0.885567948459619 1.426444393204784 1.0686573633369318 0.9783599304180763 0.962594614691174 1.0 10.568882391203 -6.326152692998416 3.5506129132926674 1.0283730287318638 0.9289157026247663 0.09337564874489679 0.14137776204310307 0.4862057028882272 12.11689912348179 0.019736179825437045 0.05040617139446647 4.7189709844294846e-07 6.326152692998416 -0.09945732610709745 RSST(ph)SGDT(ph)EEEEEEEVVPFSSDEQKR ddPTM_A549_PD325901_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.287)S(0.307)T(0.379)S(0.141)GDT(0.885)EEEEEEEVVPFSSDEQKR 60.181000000000004 0.00016689 19802000.0 347.03 506.3 300.51 314.18 253.06 346.43 340.58 349.52 368.77 507.62 365.84 True False 382.26023013001657 548.9676778600045 320.9044157134303 333.58618504544955 235.28593860960623 343.60878893850065 353.5409582725271 342.5485494068643 353.27187933221904 475.5687865690286 320.84399925083443 1.1914208494551497 1.7110112052643502 1.0001883047921636 1.0397145834872024 0.7333343904171346 1.0709528298513347 1.1019092116356846 1.067648297012597 1.1010705519102841 1.4822430454659399 1.0 8.325728190508514 -5.7826594619203355 24.999959246678326 1.0312344912946199 1.4512160522662458 0.34357073958427087 0.20043754302389868 101.70308011018703 119819.37903194176 0.018652025416330834 0.058071607652823064 1.6494552519796966e-06 5.7826594619203355 0.419981560971626 RSST(ph)SGDTEEEEEEEVVPFSSDEQK ddPTM_A549_MK2206_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.215)S(0.215)T(0.259)S(0.259)GDT(0.052)EEEEEEEVVPFSSDEQK 67.69 0.00010858 69106000.0 284.69 750.3 852.64 305.13 1268.4 865.87 584.2 679.87 1112.9 953.64 925.02 True False 332.7387119977575 788.487065209588 973.5571730515928 379.886863697806 1081.8200402393197 957.4957886820113 690.3415779927149 776.2436545145523 860.8299269361125 738.2120616682558 695.3120047467611 0.47854590417857656 1.1340046767878862 1.4001731113590814 0.5463545302028321 1.55587712113978 1.3770735758125445 0.9928515159811507 1.1163961634709114 1.238048417198887 1.0616990022157309 1.0 9.441516688033488 -5.2614905932377205 11.638667023805938 1.1350465971836525 0.47795304631770497 0.36119617715128494 0.253578052238339 0.0490038621955278 507.0262080743728 0.03208595547894214 0.2552182051221963 5.476579630340395e-06 5.2614905932377205 -0.6570935508659476 RSSTGS(ph)YEER ddPTM_A549_PD325901_60min_R1 2 RSSTGSYEER 10 1 Q7Z674;H7C434;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 RS(0.044)S(0.044)T(0.127)GS(0.782)Y(0.001)EER;RS(0.002)S(0.002)T(0.007)GS(0.989)YEER 70.889 0.0012106 7514900.0 1610.04 1574.26 1478.91 1720.9299999999998 1412.41 1478.0900000000001 1376.33 1409.4 1310.25 1714.01 2034.78 True False 1773.4900755511962 1706.9284150659507 1579.2777260082828 1827.2279375843946 1313.2071941499792 1466.052925099178 1428.7069913066744 1381.28841134709 1255.184749017112 1605.787116085223 1784.514959533164 0.99382191562863 0.9565223345129534 0.884989905840536 1.0239353432276097 0.7358902693051781 0.8215414038796868 0.8006136253855948 0.7740413740820868 0.7033758626184188 0.8998451413964628 1.0 10.801316280167178 -6.751466300139783 24.999909032502128 0.8356388809585538 0.9585229021801347 0.40964176691687815 0.08242684401019366 265.45034727751147 665410.1676383488 0.01663661547576124 0.0343126054653795 1.7722855634804751e-07 6.751466300139783 0.12288402122158093 RSSTS(ph)GDT(ph)EEEEEEEVVPFSSDEQKR ddPTM_A549_PD325901_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.318)S(0.336)T(0.349)S(0.358)GDT(0.639)EEEEEEEVVPFSSDEQKR 46.048 0.008720799999999999 21159000.0 310.33 209.08 300.8 132.01 186.93 365.6 173.65 237.35 189.85 200.82 236.04 True False 341.83447314712845 226.69990536632386 321.21409685734216 140.1639578835374 173.80068167349125 362.62267481429353 180.25834577492614 232.61586805252702 181.871264721159 188.14019092784443 207.00857638084128 1.6513058498515685 1.0951232520398368 1.5516946325276533 0.6770925163297226 0.8395820342909067 1.7517277842013814 0.8707771867543219 1.1237015978728102 0.8785687429035006 0.9088521558725954 1.0 7.693546729701237 -2.000000000000008 0.4374503197238852 0.9718239311154718 13.526051227761982 0.24090655727039012 0.30209556974977597 70.39523594152284 0.7688492947727628 0.05862574609628426 790.9096295695 0.009999999999999816 2.000000000000008 12.554227296646511 RSSTSGDT(ph)EEEEEEEVVPFSSDEQKR ddPTM_A549_MK2206_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-2;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.266)S(0.266)T(0.071)S(0.071)GDT(0.326)EEEEEEEVVPFSSDEQKR 66.454 0.00055837 9637000.0 1309.2 1597.7 1162.6 1292.8 1886.8 1256.5 1508.8 1338.1 1975.7 1778.0 1978.2 True False 1530.1609531331057 1679.0161056715433 1327.4741618851826 1609.536058035997 1609.2542194288453 1389.4619960028026 1782.9294297764611 1527.7797727593852 1528.2071045445919 1376.34856512537 1486.9583444574628 1.029054350336496 1.1291614939517054 0.892744687054115 1.0824352034039382 1.0822456630525208 0.934432360652152 1.1990446379498192 1.0274529736855653 1.0277403602063777 0.9256133974805796 1.0 10.538148517064926 -9.337461697411435 1.4112362678711539 1.0078156556449573 1.0470746158781628 0.08591367402900574 0.0833835882175669 0.9441083088275597 3.8890608666189364 0.017108124077405383 0.014488006633867111 4.597675359265946e-10 9.337461697411435 0.03925896023320541 RST(ph)GVSFWTQDSDENEQEQQS(ph)DTEEGSNKK ddPTM_A549_PD325901_60min_R1 2 RSTGVSFWTQDSDENEQEQQSDTEEGSNKK 30 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;H0YIM2;H0YIS3;H0YIL7 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 2 RS(0.461)T(0.521)GVS(0.016)FWT(0.002)QDSDENEQEQQS(0.956)DT(0.043)EEGS(0.001)NKK;RS(0.471)T(0.522)GVS(0.006)FWT(0.001)QDSDENEQEQQS(0.97)DT(0.03)EEGSNKK 119.93 4.8997e-21 24597000.0 3015.4 3020.2 3210.5 3704.3 3376.1 3362.5 3015.8 2884.0 3550.1 4379.8 4490.5 True False 3321.521188179843 3274.7228533928205 3428.3838363048417 3933.106197924309 3138.9743829127137 3335.116914833321 3130.5679193090823 2826.4763575457673 3400.901642805302 4103.258680538654 3938.196967624843 0.8434116463664534 0.8315284584071555 0.870546563437259 0.99870733491941 0.7970587577811917 0.8468639182475314 0.7949241607377378 0.7177082255615155 0.8635681939637498 1.0419130161012136 1.0 11.943319553623562 -10.209391178463587 0.9405952740974117 0.989287794414435 0.841964893782176 0.5025604771624809 0.06718452431419596 0.3700098573103212 0.6461258148113356 0.030242438036868494 0.013034648932150785 6.174599899794703e-11 10.209391178463587 -0.14732290063225906 RST(ph)GVVNIPAAECLDEYEDDEAGQK ddPTM_A549_MK2206_60min_R1 1 RSTGVVNIPAAECLDEYEDDEAGQK 25 1 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 RS(0.423)T(0.577)GVVNIPAAECLDEYEDDEAGQK 133.25 6.324399999999999e-24 11056000.0 1307.0 1069.8 1367.8 1016.5 2057.4 1568.1 1341.8 1738.1 1640.4 1759.8 1837.0 True False 1527.5896469179413 1124.248250514751 1561.7746074544568 1265.5425456324183 1754.7591854212994 1734.0353011794627 1585.5876914594742 1984.4809977080085 1268.852019180518 1362.25995776582 1380.8222013792142 1.1062898940878345 0.8141875539021692 1.131046854471561 0.9165137585189096 1.2708074824322666 1.2557991169662877 1.1482924375605583 1.4371734432759253 0.9189104997827697 0.9865571080803498 1.0 10.431311850672095 RST(ph)ITSR ddPTM_A549_MK2206_60min_R1 1 RSTITSR 7 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q16778;P33778;P23527;P06899;Q8N257;Q6DRA6;Q6DN03 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB;HIST2H2BD;HIST2H2BC Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C 1 RS(0.168)T(0.832)ITSR 78.556 0.051451 13613000.0 1415.7 1590.5 1336.8 947.66 1733.7 1367.9 1163.2 1402.3 1672.5 2170.9 2489.5 True False 1654.635549458094 1671.4496564252308 1526.378341310951 1179.8367425420745 1478.6750266185022 1512.6502700614676 1374.538383295321 1601.0803193636395 1293.6814204336843 1680.4921822444699 1871.2884432953476 0.8842226089657632 0.8932079190751588 0.8156830908563684 0.6304943242552049 0.7901908612306442 0.8083469309507857 0.7345411597127979 0.8556031674861037 0.6913319136174995 0.8980401649278159 1.0 10.869816239626795 -10.952725888585233 1.1842256960026385 1.0013886423476404 0.7803587781296063 0.3419353180507838 0.08113052567356593 0.322601766666261 0.7958421372582435 0.0586179231869588 0.013296183554699297 1.1149980591391409e-11 10.952725888585233 -0.22102986421803406 RST(ph)QGVTLTDLK ddPTM_A549_PD325901_60min_R1 3 RSTQGVTLTDLK 12 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 RS(0.183)T(0.817)QGVTLTDLK;RS(0.324)T(0.676)QGVTLTDLK;RS(0.233)T(0.767)QGVTLTDLK 145.43 4.6948e-12 152885700.0 13975.2 15646.3 16311.5 14728.0 18304.0 14563.5 15975.499999999998 17448.0 16142.4 17036.6 16862.4 True False 15393.952016001522 16964.868611694634 17418.496479017733 15637.715110285118 17018.39018537197 14444.899684513031 16583.45639462902 17099.98595230879 15463.991064708121 15960.906168515658 14788.431699560648 1.0409455396449419 1.1471715835965652 1.1778460916538718 1.0574289030762947 1.1507907350228064 0.976770219991764 1.1213803283225565 1.1563082752592906 1.0456816097117008 1.0792832189900057 1.0 13.852181443532439 -8.99489831610554 3.8473272596309775 1.018682109625573 1.1040201721375367 0.15424297687269894 0.059735022377657244 0.1852474083743927 5.731583722743503 0.010177117065108153 0.010360709479370803 1.0118163289738406e-09 8.99489831610554 0.08533806251196374 RST(ph)QGVTLTDLKEAEK ddPTM_A549_MK2206_60min_R1 1 RSTQGVTLTDLKEAEK 16 2 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 RS(0.178)T(0.822)QGVTLTDLKEAEK 208.27 1.5726999999999998e-46 40014000.0 3554.0 3338.1 4112.1 3827.7 5395.1 3820.3 3653.9 3348.3 7817.0 6714.2 7672.1 True False 4153.82831304236 3507.995031822106 4695.2576131842925 4765.48667183198 4601.487936845755 4224.561610290099 4317.766333152312 3822.931778738697 6046.461981183922 5197.457556785581 5766.905830811903 0.7202871756374001 0.6082976096261706 0.8141727558820331 0.8263507002959095 0.7979127927250942 0.7325525566446328 0.7487145550535942 0.6629086534261094 1.0484759346820582 0.9012558396594884 1.0 12.49358174913621 -8.768147618943939 24.999997151996183 1.0228914346539217 0.7420530413088147 0.6907807494318179 0.07145517099103978 47.13974904522409 175678.07504995115 0.011179838201552446 0.012034062376390584 1.7055025813074116e-09 8.768147618943939 -0.2808383933451071 RST(ph)QGVTLTDLKEAEK ddPTM_A549_PD325901_60min_R1 2 RSTQGVTLTDLKEAEK 16 2 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 RS(0.178)T(0.822)QGVTLTDLKEAEK;RS(0.155)T(0.845)QGVTLTDLKEAEK 229.2 1.4944e-55 126547000.0 17070.9 17774.9 22055.0 23497.0 21685.0 27605.0 25028.0 30356.0 28302.0 26697.0 27329.0 True False 18803.92520106764 19272.85320401697 23551.78492748895 24948.356324441174 20161.92040918878 27380.194032408588 25980.454235847094 29750.52576617867 27112.56536285617 25011.346863861487 23967.70625280465 0.7845525559571326 0.8041175488689787 0.9826465945080984 1.040915474400967 0.8412119289399866 1.1423785715499837 1.083977497129368 1.2412754667625872 1.1312123520240287 1.0435436165667589 1.0 14.548804226957627 -7.26161717279738 24.999986189134344 1.0852077072753918 0.8993339936831085 0.5766974925665422 0.09112692731261973 11.786915556825903 1657412.4202408274 0.015262737340200259 0.02533970894276859 5.474983657899389e-08 7.26161717279738 -0.18587371359228333 RST(ph)QGVTLTDLQEAEK ddPTM_A549_MK2206_60min_R1 2 RSTQGVTLTDLQEAEK 16 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RS(0.001)T(0.999)QGVTLTDLQEAEK;RS(0.03)T(0.97)QGVTLTDLQEAEK 277.1 2.4934999999999994e-106 79193000.0 12808.2 12201.3 11096.2 11076.9 16701.9 13210.2 12977.3 12280.8 20135.3 19010.1 17733.5 True False 14969.911029574887 12822.29405403406 12669.808012308922 13790.740997260933 14245.072634873142 14608.094595778937 15335.107429107937 14021.641008372655 15574.6866994669 14715.705206912158 13329.782530298462 1.1230424048965861 0.9619282253772043 0.9504887257920807 1.0345810943212852 1.0686650440466103 1.095898943780582 1.1504394309698145 1.0519032082107571 1.1684126627021703 1.103971889523592 1.0 13.702365623215703 -6.710945952022164 3.0812895291652302 1.085693453342259 1.005412962705455 0.2631514178477783 0.05953101295198931 0.32337693234313575 6.251131247192182 0.010624119955029439 0.023050771688582557 1.9456021968825627e-07 6.710945952022164 -0.08028049063680398 RST(ph)QGVTLTDLQEAEK ddPTM_A549_PD325901_60min_R1 3 RSTQGVTLTDLQEAEK 16 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RS(0.018)T(0.982)QGVTLTDLQEAEK;RS(0.377)T(0.623)QGVTLTDLQEAEK;RS(0.003)T(0.997)QGVTLTDLQEAEK 306.11 8.255899999999996e-143 142648000.0 20183.7 22662.4 24035.6 22983.6 23568.2 22976.7 25433.2 26417.6 28393.0 25808.1 24625.3 True False 22232.734365545388 24572.23998169973 25666.800353804287 24403.244772457172 21912.850937876075 22789.58537310061 26401.074343581044 25890.680243793726 27199.740949317194 24178.572161562097 21596.544212638244 1.0294579608035088 1.1377857373736728 1.1884679373278684 1.1299606331542829 1.014646173115638 1.0552422252706617 1.2224675431234595 1.1988344055824711 1.2594487655761135 1.1195574589851676 1.0 14.398512856467871 RST(ph)SFER ddPTM_A549_MK2206_60min_R1 2 RSTSFER 7 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 RS(0.165)T(0.736)S(0.099)FER;RS(0.282)T(0.695)S(0.024)FER 76.282 0.010961 38341000.0 1335.37 1661.48 1804.8000000000002 1471.72 2171.89 1617.9299999999998 1019.94 1649.69 2273.83 2796.5 2570.84 True False 1560.7478093380355 1746.0422352451374 2060.747778574211 1832.2914660680224 1852.4078580852845 1789.138278704986 1205.249895682796 1883.5386094637402 1758.8111355603733 2164.7687077463993 1932.4294764255505 0.8076609409958798 0.9035477136660237 1.0664025796097942 0.9481802510367647 0.9585901481443537 0.9258491968433369 0.6236967042710239 0.9746997923814303 0.9101554064543032 1.1202316742500797 1.0 10.916200048945372 -10.37074886787279 0.8672378412169268 0.9965799584540644 0.9050406050873844 0.1837472446955556 0.11321447954707428 1.115660537155337 1.5892228439786096 0.05921662647660992 0.02052991931102529 4.258445879010958e-11 10.37074886787279 -0.09153935336668007 RST(ph)SFER ddPTM_A549_PD325901_60min_R1 1 RSTSFER 7 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 RS(0.126)T(0.789)S(0.085)FER 45.161 0.045396 14297000.0 458.4 513.24 407.74 537.28 705.41 465.99 490.75 614.68 411.79 790.96 856.41 True False 504.93643054375565 556.4925360159365 435.4116883398023 570.4665653485869 655.864435132389 462.1951319384923 509.4257597987042 602.4197251928681 394.48389833829924 741.0186506139216 751.0769992302838 0.672283176107407 0.7409260789323056 0.5797164455655271 0.7595314008193707 0.8732319533210705 0.615376495901429 0.6782603652099214 0.8020745220666294 0.5252243095482525 0.9866080992672254 1.0 9.552817007918115 -11.00680903471726 1.2797935842540353 1.0005034870845935 0.6810675525003427 0.5894152644049424 0.09569879233226444 0.265593350121495 0.7724404761081719 0.07370956074671413 0.016637959472773425 9.844438841791435e-12 11.00680903471726 -0.3194359345842508 RST(ph)SPIIGS(ph)PPVR ddPTM_A549_MK2206_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.368)T(0.448)S(0.199)PIIGS(0.985)PPVR 64.5 0.00249 32782000.0 814.13 938.45 920.71 740.99 1252.8 1115.2 894.04 1030.2 1465.5 1515.9 1558.2 True False 951.5352404325201 986.2130965559619 1051.2805226125113 922.532583264305 1068.514779574124 1233.2097237901523 1056.4754953587938 1176.2340048551807 1133.5665899226094 1173.4571371617262 1171.255935867768 0.8124059065942238 0.8420133178025602 0.8975668685372609 0.7876438914956815 0.9122812075931771 1.0528951751919906 0.9020022550204325 1.0042501974461497 0.9678214258805571 1.0018793512387432 1.0 10.193840644072946 -6.998514728200536 6.724396809782317 0.9834810339451225 0.8406496090085913 0.741563197050679 0.04222200390301912 0.050925481982889306 12.195294957474205 0.005559429970295712 0.010244885603608984 1.0034258194562248e-07 6.998514728200536 -0.14283142493653123 RST(ph)SPIIGS(ph)PPVR ddPTM_A549_PD325901_60min_R1 2 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.374)T(0.459)S(0.176)PIIGS(0.991)PPVR;RS(0.414)T(0.465)S(0.414)PIIGS(0.707)PPVR 76.118 0.00042622 106330000.0 2585.4 2820.8 2868.9 2885.6 2888.7 3197.9 3041.7 3395.7 3232.8 3351.3999999999996 3686.1 True False 2847.8679047291134 3058.518715598462 3063.6008060971703 3063.8369583269136 2685.8076774739966 3171.8573626603675 3157.4535579821054 3327.970099624884 3096.9366583648293 3139.7920320464978 3232.73306811311 0.8809474351036859 0.9461092676555773 0.9476813400759193 0.947754390409729 0.8308164085572508 0.981168966267829 0.9767133541356867 1.0294602212756656 0.9579933118859261 0.9712500122625773 1.0 11.65853867143068 -7.466308418792925 24.99973736517063 0.983690145892986 0.915672808498481 0.512584364728381 0.03644582926362536 200.33852261805524 88534.18938222062 0.005421220894924096 0.008666399257023815 3.417366684311845e-08 7.466308418792925 -0.068017337394505 RST(ph)SPIIGSPPVR ddPTM_A549_MK2206_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 RS(0.181)T(0.698)S(0.12)PIIGSPPVR 78.441 0.00051785 120030000.0 3088.8 3122.0 2411.1 2511.9 2912.1 2463.0 2212.3 2101.0 3472.3 2881.3 3270.3 True False 3610.1139260903888 3280.8964648598353 2753.030235438984 3127.315612763476 2483.7339476355423 2723.6330251929207 2614.2462735249624 2398.823184042648 2685.829594123698 2230.4123288502415 2458.194254311617 1.468604004650296 1.334677460540483 1.1199400660099306 1.272200358974168 1.0103896155802696 1.1079812022242466 1.0634823789615624 0.9758476897564814 1.092602665315328 0.9073377032503224 1.0 11.263383211218324 -2.000000000000005 0.4078957762274616 1.0338557677892457 8.85208359494197 0.7885455476365533 0.07430078817774054 17.604484684647904 0.20231606418834597 0.013344890099851948 112.63363329855112 0.009999999999999887 2.000000000000005 7.818227827152724 RSTQGVT(ph)LTDLK ddPTM_A549_PD325901_60min_R1 1 RSTQGVTLTDLK 12 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 RS(0.26)T(0.26)QGVT(0.474)LT(0.005)DLK 47.201 0.022188999999999997 3114100.0 780.7 696.99 946.83 873.07 1106.8 998.7 1124.0 884.92 1023.4 1169.4 1199.6 True False 859.9560892790363 755.7277933866176 1011.0875775513197 926.9975510141659 1029.0621862527148 990.5669183179299 1166.7744350764008 867.2695763936896 980.390056969366 1095.5638844289472 1052.056804890939 0.817404616633969 0.7183336392800195 0.9610579703024055 0.8811288009398529 0.9781431776959915 0.9415526934599473 1.1090412890750265 0.8243562252169403 0.9318793932148918 1.0413543064744668 1.0 10.038996888457653 -5.770409895544671 24.929095236840887 0.9598982081476383 0.7678691260532293 0.5035999898872465 0.07472770918637701 88.26889436462226 245302.5262888327 0.009300377108539528 0.02953364716908873 1.6966415733617082e-06 5.770409895544671 -0.19202908209440894 RSTS(ph)FER ddPTM_A549_PD325901_60min_R1 2 RSTSFER 7 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 RS(0.22)T(0.22)S(0.56)FER;RS(0.092)T(0.057)S(0.851)FER 58.083 0.027011 27178000.0 3865.2 3862.1000000000004 3717.1 4241.7 4889.799999999999 4287.4 3580.7 4198.3 4281.4 4525.4 4705.200000000001 True False 4257.59225859015 4187.572721041129 3969.3647587381165 4503.700175400353 4546.35731689422 4252.4848358829395 3716.965497934221 4114.561612997362 4101.467646969557 4239.665471690403 4126.490228720277 1.0317708325000763 1.0148025292525156 0.9619227330556679 1.0914118114359521 1.1017492020826023 1.0305331165661664 0.9007571306153173 0.9971092587012829 0.9939361102622846 1.0274265142281034 1.0 12.010699508826658 -7.547905833900187 24.998769457241664 0.989409754127034 1.0402695822246453 0.2632950450611855 0.04547805150753446 258.9552954529863 258661.40882212014 0.006915392084733585 0.010257401019576458 2.832005980226102e-08 7.547905833900187 0.05085982809761125 RSTS(ph)PIIGS(ph)PPVR ddPTM_A549_MK2206_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.336)T(0.365)S(0.479)PIIGS(0.82)PPVR 56.327 0.0039443 29629000.0 651.24 630.06 529.13 732.45 888.59 761.39 623.02 733.85 1109.2 1048.5 1345.6 True False 761.153390710666 662.1273627961526 604.1685904681802 911.9002828809295 757.8795881080551 841.9597844302222 736.2146694984962 837.8754848213691 857.9679710284266 811.6431217851241 1011.4503833292706 0.7525365586448919 0.6546315802626985 0.5973289450734207 0.9015768819814335 0.7492998179638167 0.8324281628712656 0.7278801626187398 0.8283901006230621 0.8482551246897112 0.802454707776703 1.0 9.982209834928527 -14.999999999794577 0.06308304952445554 1.9391411431726013 0.3935171493127719 0.24103474465114572 0.09314163922509842 99.5747127453366 0.4734895204638031 14.030912089978493 2.285802787187223 1.0000000004730044e-15 14.999999999794577 -1.5456239938598295 RSTS(ph)PIIGS(ph)PPVR ddPTM_A549_PD325901_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.04)T(0.311)S(0.663)PIIGS(0.986)PPVR 54.967 0.03075 21663000.0 6286.5 6799.3 6092.5 7394.7 7778.6 6152.3 5679.5 6410.3 7377.2 9571.6 12508.0 True False 6924.700852123301 7372.3008731454265 6505.97368717871 7851.4538244178075 7232.257970713203 6102.197708588561 5895.636480441653 6282.441537716931 7067.161938904056 8967.24754250053 10969.595294744804 0.6312631109956001 0.6720668060267702 0.5930914963011918 0.7157468998130859 0.6593003457637088 0.5562828476919232 0.5374525059521631 0.5727140672843833 0.6442500155215131 0.8174638445227294 1.0 13.421222680401316 -10.433663836908575 0.7369333359903083 1.0063852949459657 0.6179314184045354 0.6839045227782738 0.07208368754136432 0.1941200792808215 0.18729997809341958 0.04246345263632566 0.01184961461405415 3.6841403202078157e-11 10.433663836908575 -0.3884538765414304 RSTS(ph)PIIGSPPVR ddPTM_A549_PD325901_60min_R1 2 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 RS(0.044)T(0.096)S(0.86)PIIGSPPVR;RS(0.196)T(0.196)S(0.601)PIIGS(0.007)PPVR 72.491 0.00070495 305330000.0 6403.3 5728.5 6196.6 5981.9 7252.6 6098.7 5860.2 6482.6 7223.2 6038.5 6808.7 True False 7053.358302139684 6211.260799172503 6617.138539182864 6351.388377119401 6743.202396111716 6049.034209217539 6083.213117824486 6353.29945749868 6919.634023354627 5657.228079463146 5971.273063905415 1.1812151657868664 1.0401903802922265 1.108162106868218 1.063657332221444 1.1292738288711641 1.0130225405001434 1.0187464302370821 1.0639773779401416 1.1588205646098777 0.947407365049075 1.0 12.543822828745935 -11.137818290118066 1.5196734741529547 1.0001926407247719 1.092272536165926 0.3579145643634001 0.05499114723699656 0.43389374312410117 1.8012772250364644 0.039686298879567664 0.008590569283777268 7.280843731129828e-12 11.137818290118066 0.09207989544115414 RSVAVS(ph)DEEEVEEEAER ddPTM_A549_MK2206_60min_R1 1 RSVAVSDEEEVEEEAER 17 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 RS(0.003)VAVS(0.997)DEEEVEEEAER 134.34 4.6161e-23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RSVAVS(ph)DEEEVEEEAER ddPTM_A549_PD325901_60min_R1 1 RSVAVSDEEEVEEEAER 17 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 RS(0.082)VAVS(0.918)DEEEVEEEAER 65.172 0.002016 1339100.0 294.32 302.85 336.63 402.3 168.61 401.68 321.83 241.24 271.04 246.86 249.16 True False 324.1991497330676 328.37223235216743 359.4757361206351 427.1491573104094 156.76741527292222 398.40885125657945 334.0774167621333 236.42827895088112 259.6491313669896 231.27321747060887 218.51489955537366 1.4836477988125134 1.502745272841017 1.6450856982845723 1.954782754766642 0.7174220869693874 1.8232571420404173 1.5288541762685388 1.08197783964369 1.1882445174004812 1.0583864896224258 1.0 7.77158784378797 -8.43576234270802 0.5521806780033534 1.0299617296894417 1.5704874880281974 0.29788283495263823 0.30464717248837275 0.6425937429826819 0.43246146474013825 0.09068557906948961 0.11228931928632002 3.666381537425917e-09 8.43576234270802 0.5405257583387557 RSVDISLGDS(ph)PR ddPTM_A549_MK2206_60min_R1 2 RSVDISLGDSPR 12 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 RSVDISLGDS(1)PR;RSVDISLGDS(1)PR 89.866 0.00011458 7296300.0 488.28000000000003 380.39 312.81 425.12 642.0799999999999 415.98 477.56 416.63 727.14 561.51 812.03 True False 570.6897267001472 399.7502262229444 357.17116168871837 529.2744190843617 547.630882558233 459.9987274948237 564.3264703632336 475.6885783758629 562.4439510039758 434.66450101436817 610.3805401121194 0.9349736585562155 0.654919677074756 0.5851614496476418 0.8671220399443608 0.8971958418884716 0.7536261352800133 0.9245485943237538 0.7793311665678017 0.9214644210325935 0.7121205091737125 1.0 9.253565157302232 -8.433995799332205 0.3399499770128287 1.0111284674940755 0.7279657535563515 0.0 0.13332647092131986 0.8580691562971415 0.280140963257407 0.06714444856129616 0.0818995676404767 3.681325343486122e-09 8.433995799332205 -0.28316271393772396 RSVQEGENPDDGVRGS(ph)PPEDYR ddPTM_A549_PD325901_60min_R1 1 RSVQEGENPDDGVRGSPPEDYR 22 2 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 RS(0.005)VQEGENPDDGVRGS(0.98)PPEDY(0.015)R 45.269 0.009848299999999999 2967700.0 712.69 754.48 743.63 756.71 1090.7 1265.2 691.17 787.46 1677.2 1066.4 833.46 True False 785.0417641453523 818.0626774477906 794.097203610456 803.4502580868998 1014.0929947107305 1254.8966306757227 717.4728525727361 771.7534925495805 1606.7131166201107 999.0673220070377 730.9497037382473 1.0740024383763556 1.1191777946745545 1.0863910328566488 1.099186789430063 1.3873635758033998 1.7168029814608154 0.9815625465109467 1.055822977426016 2.1981172006815313 1.3668072056087777 1.0 9.513628328286458 -6.857948611555802 0.9602215152697448 1.5114432977827776 1.0562777168980795 0.07342517843603469 0.34450719770708244 0.9524357356493557 1.6783548896909317 0.07919225712997212 0.24917332281195606 1.386919928218806e-07 6.857948611555802 -0.45516558088469816 RSVTVTK ddPTM_A549_MK2206_60min_R1 1 RSVTVTK 7 1 Q86VF2-2;Q86VF2;Q86VF2-5 Q86VF2-2 IGFN1 Immunoglobulin-like and fibronectin type III domain-containing protein 1 0 23.557 0.047867 741470.0 559.36 213.71 258.32 0.0 578.7 407.42 170.1 400.62 535.07 337.82 367.35 False True 653.7662929609946 224.58692617078657 294.95366032872903 0.0 493.5739965992546 450.5329139764918 201.00496818993636 457.40911184729435 413.87749933121177 261.5062273738205 276.12685665577243 2.367630229376776 0.8133469119621457 1.0681817187251244 0.0 1.7874900057786047 1.6316156980635133 0.7279442884489677 1.6565180127245411 1.4988672392963325 0.9470510421947893 1.0 8.109187403958517 RSYS(ph)PDGK ddPTM_A549_MK2206_60min_R1 3 RSYSPDGK 8 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.113)YS(0.887)PDGK;RS(0.13)Y(0.002)S(0.868)PDGK;RS(0.005)YS(0.995)PDGK 78.683 0.0017819000000000003 96011000.0 17954.9 19155.6 18379.0 17106.0 23895.699999999997 19289.800000000003 18967.3 19388.5 26562.3 26420.399999999998 26415.899999999998 True False 20985.24816484083 20130.53821981713 20985.4185629518 21296.970767917508 20380.674184442385 21331.033832467063 22413.412893292054 22136.879249791 20545.981461276944 20452.013290235296 19856.102988248862 1.056866404110626 1.0138212030694382 1.0568749857598585 1.0725654868189076 1.0264186379625435 1.0742809827835345 1.1287921354233832 1.1148652513986221 1.034743900826681 1.0300114429472442 1.0 14.277294883019689 -9.169472604266318 2.523828672798266 1.0124824024238217 1.0668179876199522 0.27751233987769386 0.03270702310480863 0.22721687390415019 3.000865736474004 0.007009386758312256 0.006648594264335322 6.769044913906296e-10 9.169472604266318 0.054335585196130465 RSYS(ph)PDGK ddPTM_A549_PD325901_60min_R1 2 RSYSPDGK 8 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.203)Y(0.009)S(0.788)PDGK;RS(0.045)YS(0.955)PDGK 63.415 0.0041417 145410000.0 9472.1 8766.599999999999 8800.6 8610.9 9991.2 9088.5 8796.3 8797.7 8942.5 9483.2 10496.3 True False 10433.700619008525 9505.39214838538 9397.861638306926 9142.775736227195 9289.45257976882 9014.486269282566 9131.048010020055 8622.22297183787 8566.677823381437 8884.42913358696 9205.321641527808 1.1334422658236245 1.0325975037638955 1.0209161617895584 0.9932054622601724 1.0091393806232118 0.9792690163715378 0.9919314463524356 0.9366563502724973 0.9306223244535782 0.965140543651054 1.0 13.168252416072164 -2.0000000000000497 0.5079629847010952 0.9669981119352727 6.399295750069385 0.8240745314290879 0.021892502737310224 36.861966371486 0.3432282483223512 0.00538285558285117 215.90882476935053 0.009999999999998855 2.0000000000000497 5.432297638134112 RSYS(ph)PDGKES(ph)PSDKK ddPTM_A549_PD325901_60min_R1 1 RSYSPDGKESPSDKK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 RS(0.16)Y(0.001)S(0.839)PDGKES(0.577)PS(0.422)DKK 67.227 0.00093538 12467000.0 2236.4 2732.5 2715.2 2327.9 2957.4 3557.6 2427.8 2482.1 2626.8 2509.4 3436.6 True False 2463.437681649335 2962.7773647095846 2899.469799823986 2471.6890959555108 2749.682426476129 3528.6280851185193 2520.191257543136 2432.5925683302194 2516.4047309430644 2350.956055743117 3013.9199864022994 0.8173533779142982 0.983031194615832 0.9620261363623882 0.8200911461176357 0.9123276128369986 1.1707769619095376 0.8361838631792861 0.8071191601984075 0.8349275170861067 0.7800326705253515 1.0 11.557425401414386 -5.235664059573412 22.44039375927407 0.9220607533414121 0.8173528339926607 0.04766677700380262 0.10958269264156253 4160.185770143918 3621690.2058918923 0.014515122214387428 1.178012419675371 5.8121383084020334e-06 5.235664059573412 -0.10470791934875145 RSYS(ph)PDGKESPSDK ddPTM_A549_MK2206_60min_R1 2 RSYSPDGKESPSDK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.254)Y(0.001)S(0.744)PDGKESPSDK;RS(0.17)YS(0.828)PDGKES(0.001)PSDK 73.809 0.00019867 19852300.0 3494.8 4055.4 3882.1000000000004 3597.1000000000004 4780.2 3472.1000000000004 3521.7 3837.0 5050.4 5475.0 5984.5 True False 4084.6368003433995 4261.802537986094 4432.64015470021 4478.389661479954 4077.038912292647 3839.515317406552 4161.5473043768325 4380.9065003196765 3906.492463831558 4238.193697447362 4498.383486202453 0.9080232516573771 0.9474075634187245 0.9853851207430641 0.9955553312020141 0.9063342253495809 0.8535322364540958 0.9251206165817626 0.9738846218329085 0.8684213953331553 0.942159269090074 1.0 12.135190940455336 -5.2483542225330355 21.480026481487734 0.9380165052051711 0.9080231217121357 0.03567792272485937 0.04665100078693062 1182.0606955626681 1940152.4446680457 0.007815217458714089 0.16730741234463398 5.644763845268152e-06 5.2483542225330355 -0.029993383493035375 RSYS(ph)PDGKESPSDK ddPTM_A549_PD325901_60min_R1 1 RSYSPDGKESPSDK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.028)YS(0.969)PDGKES(0.001)PS(0.001)DK 78.661 0.00020895 6152700.0 2469.6 2599.0 2434.1 2842.8 2995.8 3234.5 3142.0 3331.8 2641.9 2943.7 3127.9 True False 2720.3119739765675 2818.0268511912923 2599.292663432369 3018.3932995327646 2785.3853429489395 3208.159304395056 3261.5705293683704 3265.344635253464 2530.8701304547276 2757.834279625014 2743.1881293917713 0.9916607413213486 1.0272816585190292 0.9475444412952795 1.1003231120725259 1.0153825445309594 1.169500286918484 1.1889707798099638 1.1903465898919106 0.922601736037652 1.005339097991974 1.0 11.421637851082146 -8.786810441135742 24.99852339348672 0.9634508133922758 1.0780678212945245 0.24549746590259192 0.07950503996240012 218.90335559448116 215687.98333594328 0.015008076429165995 0.0159801152866076 1.6337648905007882e-09 8.786810441135742 0.11461700790224871 RSYS(ph)PDGKESPSDKK ddPTM_A549_PD325901_60min_R1 2 RSYSPDGKESPSDKK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.161)Y(0.003)S(0.835)PDGKESPSDKK;RS(0.055)YS(0.945)PDGKESPSDKK 117.84 2.3941999999999996e-07 154011000.0 11210.8 11309.2 12473.1 10524.1 12751.6 14470.0 13875.2 14255.7 12898.7 13337.900000000001 15075.3 True False 12348.912163045234 12262.265973640848 13319.599572843461 11174.149755034743 11855.971606631836 14352.161117513208 14403.228328800773 13971.358880119704 12356.612495437525 12495.74271773975 13221.133670200366 0.934028236238087 0.9274746235475443 1.0074476141834214 0.8451733439637328 0.8967439481649352 1.0855469338353418 1.0894094778925636 1.0567443933805993 0.9346106622678341 0.9451339824136561 1.0 13.690558268214485 -7.1989676240851885 24.999889738296012 0.9930055937307529 0.9229276957998345 0.3394024966568482 0.061562757391629294 294.3419679806653 117789.12400841892 0.010146935112608066 0.01757500465512411 6.324589983612331e-08 7.1989676240851885 -0.07007789793091845 RSYS(ph)PR ddPTM_A549_PD325901_60min_R1 1 RSYSPR 6 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4;P11274-2;P11274 O75494-2;Q5JRI1;P11274-2 SRSF10;BCR Serine/arginine-rich splicing factor 10;Breakpoint cluster region protein 1 RS(0.02)YS(0.98)PR 66.546 0.044909 103670000.0 2855.4 2223.4 2279.2 2496.0 2656.5 2787.5 2369.1 2448.5 2746.4 3079.1 2871.3 True False 3145.2781059656204 2410.773721022978 2433.880217942999 2650.1722511727107 2469.9166044274825 2764.7995241926806 2459.2573969212644 2399.662746688909 2630.9783588632663 2884.685100517505 2518.1483026703504 1.2490440307388708 0.9573597069189659 0.9665356942488296 1.0524289805975116 0.9808463631027128 1.0979494421598486 0.9766134084769211 0.9529473479160087 1.0448067558504264 1.1455580664008007 1.0 11.298147535640638 -5.253146617327715 24.76392854826393 1.0123107134295712 1.2490441656808229 0.5553295828604232 0.05939785254504198 369.43691874687227 1103187.243638158 0.005800411920801612 0.09092707330966299 5.58281687650068e-06 5.253146617327715 0.23673345225125164 RSYS(ph)SPDITQAIQEEEKR ddPTM_A549_MK2206_60min_R1 3 RSYSSPDITQAIQEEEKR 18 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.003)YS(0.907)S(0.09)PDITQAIQEEEKR;RS(0.338)YS(0.643)S(0.019)PDITQAIQEEEKR;RS(0.039)YS(0.944)S(0.016)PDITQAIQEEEKR 225.84 9.517999999999999e-65 49311000.0 8055.099999999999 9505.7 9007.2 8049.9 10453.8 9462.5 8396.1 8543.7 13868.1 12618.7 12747.400000000001 True False 9414.603951712857 9989.499527872571 10284.55640025134 10022.12586137374 8916.05986806512 10463.815469300851 9921.562689121249 9754.795638983898 10726.997492805016 9768.12690593224 9581.868769657809 0.9825436121109676 1.0425418848884234 1.0733351340417727 1.0459468922294217 0.9305136693479819 1.092043287258936 1.0354517399089334 1.018047300947565 1.1195099568440554 1.0194386022968964 1.0 13.226091339557941 RSYS(ph)SPDITQAIQEEEKR ddPTM_A549_PD325901_60min_R1 4 RSYSSPDITQAIQEEEKR 18 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.2)YS(0.746)S(0.054)PDITQAIQEEEKR;RS(0.002)YS(0.95)S(0.049)PDITQAIQEEEKR;RS(0.036)YS(0.482)S(0.482)PDITQAIQEEEKR;RS(0.35)YS(0.646)S(0.004)PDITQAIQEEEKR 195.97 5.632000000000001e-49 178582000.0 10110.400000000001 10165.3 9656.6 10447.5 10642.1 10525.7 9948.4 11309.300000000001 11732.599999999999 11007.0 12410.3 True False 11136.800365116907 11021.965506123448 10311.954945853091 11092.818347005963 9894.635609251918 10439.98218898471 10326.991805973368 11083.727139525778 11239.519623215547 10312.01614153363 10883.91177537347 1.0232350826580234 1.0126842015627457 0.9474493324344544 1.0191940706562117 0.9091065614515599 0.959212313040499 0.948830900057439 1.0183587820515434 1.0326727977202732 0.9474549550159124 1.0 13.409909546859101 -8.282152815229034 24.17066054486116 1.0160796705212705 0.9733378411137199 0.03136720784999025 0.039295028217919525 550.2517769328967 642090.8860469843 0.0056056502130743665 0.006781522071826443 5.222124057521951e-09 8.282152815229034 -0.04274182940755056 RSYSS(ph)PDITQAIQEEEKR ddPTM_A549_MK2206_60min_R1 1 RSYSSPDITQAIQEEEKR 18 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.045)YS(0.353)S(0.602)PDITQAIQEEEKR 181.82 2.7732999999999995e-40 38101000.0 1513.4 1669.6 1339.1 1446.7 1946.8 1372.7 1312.0 1443.5 1828.2 2227.2 2320.2 True False 1768.8249209224273 1754.5755085618134 1529.0045158957912 1801.141564944832 1660.4282989103651 1517.9582028754849 1550.3734171969227 1648.1205455333477 1414.1156190354936 1724.073973142421 1744.030305737643 1.0142168488146182 1.0060464561822566 0.8767075382036403 1.0327467126111858 0.9520639024722004 0.8703737531862784 0.8889601356675895 0.9450068270667292 0.8108320218881685 0.9885573475818809 1.0 10.768209394477346 -7.009535055402043 23.923354668331438 0.907288059715828 0.9785448314499441 0.18252637488855594 0.06249564559000237 376.14800876782454 943758.3941572728 0.010999199966280517 0.019983970433322056 9.782839864255667e-08 7.009535055402043 0.07125677173411604 RT(ph)ASFHEAR ddPTM_A549_MK2206_60min_R1 1 RTASFHEAR 9 1 Q9NS62-2;Q9NS62 Q9NS62-2 THSD1 Thrombospondin type-1 domain-containing protein 1 1 RT(0.611)AS(0.389)FHEAR 45.357 0.029550999999999997 6605900.0 1562.5 1269.2 1226.0 918.75 992.78 706.01 666.32 923.79 999.33 1924.7 2088.9 True False 1826.2118005426814 1333.7968588084896 1399.8652352238373 1143.8437912442546 846.743377127714 780.7195095884914 787.3817190142177 1054.740061488223 772.983350602089 1489.9089332377953 1570.1684792928904 1.1630674189594594 0.8494609823075493 0.8915382353454532 0.7284847494578245 0.5392691219410011 0.49722021546380846 0.5014632056356189 0.6717368711688918 0.4922932543838826 0.9488847552899297 1.0 10.616703653460178 -5.22977483362752 1.1045848695427605 0.6972932083371244 1.38795631020013 0.41018308489343513 0.1710376090759076 1.8288232768906798 1.6863598574985965 0.03229502424340982 1.4911565176569779 5.891490291799132e-06 5.22977483362752 0.6906631018630056 RT(ph)ASFHEAR ddPTM_A549_PD325901_60min_R1 1 RTASFHEAR 9 1 Q9NS62-2;Q9NS62 Q9NS62-2 THSD1 Thrombospondin type-1 domain-containing protein 1 1 RT(0.589)AS(0.411)FHEAR 43.382 0.042171 7787700.0 3352.1 3655.0 3631.2 3639.1 4375.4 3250.3 2775.2 3528.2 4057.1 3875.8 3954.7 True False 3692.4027243144055 3963.0196772236177 3877.635068179453 3863.87894200425 4068.0869983105626 3223.83063443353 2880.8117546477106 3457.827283180644 3886.5941959452957 3631.081326551833 3468.296970908798 1.0646155030221893 1.1426413915718374 1.118022793522031 1.1140565454496816 1.172935026162019 0.9295140126333501 0.8306127701322102 0.9969813173969903 1.1206059424971593 1.0469349530932412 1.0 11.760011718433626 -7.242815482475802 24.764377409775012 1.0264546905565526 1.1228630254390926 0.3843724880347976 0.07686832836690173 950.2014194275826 1263492.2063579077 0.013669119640942362 0.023647221620693645 5.717214908443342e-08 7.242815482475802 0.09640833488253997 RT(ph)ASNPKVENEDEPVR ddPTM_A549_MK2206_60min_R1 2 RTASNPKVENEDEPVR 16 2 Q9UBF8-2 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RT(0.695)AS(0.305)NPKVENEDEPVR;RT(0.618)AS(0.382)NPKVENEDEPVR 152.04 1.7651e-15 37010000.0 3247.6 3299.0 2936.3 3588.5 4534.2 3182.3999999999996 2561.3 2915.5 5329.1 5362.7 5712.1 True False 3795.7154838031433 3466.9050088317113 3352.711492812198 4467.682661093889 3867.225186418418 3519.15945569385 3026.6550559957923 3328.7810533442844 4122.067358824004 4151.262345443097 4293.627924059995 0.8840345625975824 0.8074535265164415 0.7808574827885691 1.0405379180758891 0.9006894064452663 0.8196237582613309 0.7049178712099089 0.7752840050929786 0.9600429827012664 0.9668425906634501 1.0 12.067981460634881 -8.880993080621778 6.093955293141656 0.9825340219564016 0.8400500265139199 0.355987521531794 0.08197496268547162 0.17108051630258725 8.487675938954474 0.015261481187843567 0.01617413515779129 1.3152457871224474e-09 8.880993080621778 -0.1424839954424817 RT(ph)ASPPALPK ddPTM_A549_MK2206_60min_R1 1 RTASPPALPK 10 1 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 RT(0.62)AS(0.38)PPALPK 83.617 0.00059488 6325400.0 1120.3 1017.5 1131.7 934.23 1466.6 1212.2 916.09 1111.4 1865.0 1588.5 1477.4 True False 1309.3792512946977 1069.2864039061124 1292.1920772453648 1163.1163919391788 1250.8650827932727 1340.4741994067633 1082.53169493897 1268.944353519752 1442.5804777930184 1229.6567467388368 1110.5208058343226 1.179067735080366 0.9628693116674827 1.1635910560672067 1.0473611892983326 1.1263769901667993 1.2070680642490792 0.9747964101633156 1.1426569829697224 1.2990125625869953 1.1072793416193663 1.0 10.117020706986706 -6.938499548111605 10.416053130518891 1.1361282525804524 1.084833278272825 0.01565585055257157 0.09925175401266327 1.5029128376768974 245.900538644338 0.01803234291093612 0.034100283878154836 1.1521272586268243e-07 6.938499548111605 -0.05129497430762742 RT(ph)ASPPALPK ddPTM_A549_PD325901_60min_R1 1 RTASPPALPK 10 1 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 RT(0.639)AS(0.361)PPALPK 81.565 0.00068485 14751000.0 5164.7 4275.3 5235.2 5179.6 5845.7 6476.1 5235.1 5903.7 6460.5 6223.3 7017.1 True False 5689.016541948814 4635.594535166656 5590.492153815013 5499.532128274907 5435.118198570198 6423.360788744111 5434.324595256643 5785.946072136943 6188.987651993931 5830.359775924975 6154.041185061855 0.9244358903151594 0.7532602392098003 0.9084261846321755 0.893645648915109 0.8831787170620908 1.0437630486347726 0.8830497606105998 0.9401864397952983 1.0056786209063573 0.9474034379356162 1.0 12.58731838340109 -7.01657682627406 0.4659464398440786 1.0048906735990857 0.8253421152640146 0.332386954459558 0.06095889968313997 0.8031563332387517 0.2878468509838572 0.014222634052039362 0.06134994827818302 9.625497237960278e-08 7.01657682627406 -0.1795485583350711 RT(ph)ASPPPPPK ddPTM_A549_PD325901_60min_R1 3 RTASPPPPPK 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.5)AS(0.5)PPPPPK;RT(0.577)AS(0.423)PPPPPK;RT(0.584)AS(0.416)PPPPPK 66.98899999999999 0.002966 52572500.0 9412.5 10405.8 9384.2 10146.800000000001 11580.900000000001 10303.7 9303.5 9871.4 12229.8 11530.1 11671.3 True False 10368.050070883732 11282.733285158281 10021.068243778824 10773.544790945218 10767.497535936101 10219.790083380845 9657.54978357055 9674.507183036509 11715.824036275115 10802.087518260825 10235.804090466492 1.0129199405584963 1.1022810895400867 0.9790211062277295 1.0525352669634984 1.0519444726345264 0.9984354910523774 0.9435067043306816 0.9451633792060588 1.1445924455692833 1.0553237852922335 1.0 13.321336819650112 -8.755981846854063 24.99895447247614 1.0682797646920132 1.0128382262441558 0.17256083670769407 0.054352882400190095 215.0112695706518 984887.2267372587 0.011543691998756322 0.012909112583417745 1.753953814111322e-09 8.755981846854063 -0.055441538447857486 RT(ph)EARSSDEENGPPS(ph)SPDLDR ddPTM_A549_MK2206_60min_R1 1 RTEARSSDEENGPPSSPDLDR 21 2 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 RT(0.625)EARS(0.179)S(0.196)DEENGPPS(0.57)S(0.43)PDLDR 64.733 0.00072133 5296300.0 140.79 208.85 352.27 212.4 333.87 214.37 268.34 147.67 311.93 272.92 416.58 True False 164.5519100149786 219.47957292952495 402.22718304429156 264.4380095349983 284.7581652749148 237.05449111271056 317.0939045507791 168.6026747204083 241.2783530498531 211.26718244882795 313.1316889768933 0.5255038560697102 0.700917794831429 1.2845304298600477 0.8444945652067548 0.9093878879052951 0.757044079081384 1.012653511967542 0.538440153634051 0.7705331703673645 0.674691159936923 1.0 8.290625706607827 -10.834114898118607 1.1776152593850773 0.9964274643133679 0.8227764005415007 0.0 0.2231552547559138 0.9307900597454153 2.3636778030852166 0.12491487081728428 0.033454996101659515 1.4651601629541156e-11 10.834114898118607 -0.17365106377186723 RT(ph)EARSSDEENGPPSS(ph)PDLDR ddPTM_A549_PD325901_60min_R1 2 RTEARSSDEENGPPSSPDLDR 21 2 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 RT(0.486)EARS(0.235)S(0.279)DEENGPPS(0.225)S(0.775)PDLDR;RT(0.611)EARS(0.185)S(0.204)DEENGPPS(0.224)S(0.776)PDLDR 111.64 1.0170999999999999e-10 23381000.0 615.9100000000001 472.13 604.48 429.38 680.73 638.23 627.61 435.74 381.6 781.4200000000001 433.96 True False 678.4367297910221 511.9180520403788 645.5036478335311 455.90182740726715 632.9178731910108 633.0324664844825 651.4940419913697 427.0488238685828 365.56267904974607 732.0810078420286 380.5856710990928 1.7826123822049467 1.3450796782811383 1.696079744593069 1.1978954070726544 1.663010253021897 1.6633113502574834 1.7118196807302835 1.1220832950313373 0.9605266482945565 1.9235642942832107 1.0 8.572077435507978 -8.399670786764885 4.362330855265087 0.98370264739201 1.5659448739795125 0.0018049625945593117 0.32692836352450566 0.0814761847464602 2.544123330484107 0.025354436508964077 0.03070437333971897 3.984090667157364e-09 8.399670786764885 0.5822422265875026 RT(ph)EARSSDEENGPPSSPDLDR ddPTM_A549_MK2206_60min_R1 1 RTEARSSDEENGPPSSPDLDR 21 2 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 RT(0.381)EARS(0.309)S(0.309)DEENGPPSSPDLDR 64.028 0.0029061 1607400.0 342.34 409.92 382.78 290.49 380.25 302.52 201.96 484.29 358.82 184.2 460.63 True False 400.1186225905799 430.7831770901164 437.0639598197231 361.6600630405915 324.31572871412925 334.5324656034761 238.6535177874165 552.939590575923 277.5478429177965 142.58909206754402 346.242858258741 1.1556010847495328 1.2441648017132527 1.262304620571013 1.0445271416120574 0.936671243834794 0.9661786737951604 0.6892662537145388 1.5969703847659473 0.8015987515629566 0.411818146328349 1.0 8.435640503648587 -6.44832120641935 3.319780254112094 0.9475162379531676 1.2223458307550963 0.19014182927762024 0.27092056717160656 0.2801940949398269 5.9583911471089515 0.030427521620719423 0.07440872516249326 3.561875978135949e-07 6.44832120641935 0.27482959280192865 RT(ph)EARSSDEENGPPSSPDLDR ddPTM_A549_PD325901_60min_R1 2 RTEARSSDEENGPPSSPDLDR 21 2 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 RT(0.333)EARS(0.333)S(0.333)DEENGPPSSPDLDR;RT(0.433)EARS(0.433)S(0.134)DEENGPPSSPDLDR 71.54 0.00019337 4454600.0 729.5 590.0799999999999 507.32 329.07 896.64 465.5 651.13 886.52 678.54 607.78 601.5 True False 803.5583029704841 639.8081124859401 541.7497859629877 349.3959065278061 833.663099640075 461.7091223360334 675.909108462008 868.8376631385144 650.023323486412 569.4046670756163 527.5193132226569 1.5232775044035511 1.2128619681757282 1.026976211834588 0.6623376581102198 1.5803461195518351 0.8752459118802989 1.2812973696315044 1.6470253152073557 1.2322265880946963 1.0794006073390536 1.0 9.04308010365235 -10.562735191439986 1.1218223703291035 1.0124170732613866 1.2148100984539678 0.057710855296301156 0.2830516843334748 1.0085676785428455 2.4387769667265013 0.1365765852549773 0.04836771036745935 2.736937049238514e-11 10.562735191439986 0.20239302519258118 RT(ph)EEPDRDER ddPTM_A549_PD325901_60min_R1 1 RTEEPDRDER 10 2 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 1 RT(1)EEPDRDER 57.803999999999995 0.023303 4031900.0 195.54 152.77 158.48 206.63 209.65 237.73 332.57 252.44 209.57 226.39 246.3 True False 215.39107685106015 165.64446404636163 169.2354058176581 219.39306580922155 194.92490725323617 235.79400569913025 345.2261333392868 247.40488616465097 200.76250169930628 212.09569676404084 216.00666142433994 0.9971501593088813 0.7668488691696272 0.7834730869026264 1.0156773145909102 0.9024022961510008 1.0916052502469753 1.598219846845826 1.145357668755548 0.9294273629131887 0.9818942405085549 1.0 7.754931994087873 -6.547483923671205 1.9974559115111787 1.0363595822212766 0.8453036867316763 0.1969370760960506 0.19098656233190078 0.5429181150879877 4.303166228958676 0.03110518192868951 0.0820523963294731 2.834758566131438e-07 6.547483923671205 -0.19105589548960022 RT(ph)ESDSGLKK ddPTM_A549_MK2206_60min_R1 1 RTESDSGLKK 10 2 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RT(0.654)ES(0.341)DS(0.005)GLKK 60.628 0.014805 27120000.0 4585.8 5183.9 4733.1 4291.0 5747.5 4881.9 4267.0 4623.9 6924.9 6123.2 7517.5 True False 5359.770927954324 5447.738367772871 5404.324751091312 5342.2951926303085 4902.050363667208 5398.499417657049 5042.258667057368 5279.351985099858 5356.421206792962 4739.9648672529065 5650.697277554839 0.9485149645591342 0.9640825017138784 0.9563996239115223 0.9454222957316195 0.8675124719808767 0.955368718671314 0.8923250387320778 0.9342832797060279 0.9479221667154649 0.8388283134685949 1.0 12.46421318702211 -10.0404808634855 0.7693673672836213 0.9967602956557423 0.9332012003736231 0.0 0.054692882631030774 0.43025054127123774 0.509910908288961 0.013752679091953563 0.005872987729775413 9.11001593257436e-11 10.0404808634855 -0.06355909528211923 RT(ph)ESDSGLKK ddPTM_A549_PD325901_60min_R1 1 RTESDSGLKK 10 2 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RT(0.631)ES(0.366)DS(0.002)GLKK 73.877 0.003095 68223000.0 4529.6 4525.0 5497.0 5112.4 5760.7 5124.3 5738.4 5008.1 5702.5 5900.7 5835.6 True False 4989.441657484724 4906.337630488884 5870.059476146307 5428.181336897181 5356.0883053361185 5082.569399756252 5956.777952172971 4908.209516721552 5462.843755977927 5528.128794980236 5117.858194916272 0.9749081485768581 0.958670100582799 1.1469757958470246 1.0606353537284723 1.0465487907923061 0.9931047727748548 1.1639200863537065 0.9590358563660536 1.0674081906771742 1.0801645110979237 1.0 12.321324458548766 -4.426864188799516 19.489042438284383 1.0360828662167818 0.9251065928967888 0.0 0.06815546274452032 0.0 0.0 0.008207910925045686 0.0 3.742275972495452e-05 4.426864188799516 -0.11097627331999305 RT(ph)ESVPSDINNPVDR ddPTM_A549_PD325901_60min_R1 1 RTESVPSDINNPVDR 15 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 RT(0.595)ES(0.404)VPS(0.002)DINNPVDR 69.331 0.0070271 1919700.0 836.33 662.56 682.9 378.2 482.66 779.27 635.69 1013.3 681.43 698.39 874.96 True False 921.2336059263946 718.3962564545224 729.2457006112988 401.56055504548056 448.7596266866063 772.9238834861453 659.8815308129151 993.0889365815278 652.7918668366576 654.293536212017 767.3454668284228 1.2005460978795108 0.9362096832653273 0.9503486136764485 0.523311301629503 0.584820848087382 1.0072697590575197 0.8599536445303111 1.29418753288026 0.8507144370511032 0.8526714035548163 1.0 9.583732429915154 -8.04615398796829 24.99977077856868 0.9607038696475219 0.8528924456681289 0.07379545005899146 0.20848920269963414 1076.327472787191 583001.3549695236 0.03426059637218343 0.04423106792360915 8.991787028483071e-09 8.04615398796829 -0.10781142397939292 RT(ph)GSNAAQYK ddPTM_A549_MK2206_60min_R1 3 RTGSNAAQYK 10 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 RT(0.873)GS(0.127)NAAQYK;RT(0.649)GS(0.351)NAAQYK;RT(0.5)GS(0.5)NAAQYK 93.649 0.00036724 186138600.0 7154.0 8407.8 7568.4 6748.5 8924.4 7130.799999999999 6859.199999999999 7568.4 10299.400000000001 10451.000000000002 11581.400000000001 True False 8361.420301492695 8835.721107382611 8641.712925177884 8401.882802951674 7611.632582081191 7885.376522958047 8105.427853077084 8641.243877252913 7966.602344762152 8090.111841465268 8705.418749620705 0.9604845604764276 1.014967959785689 0.9926820493907204 0.9651325277509187 0.874355708898303 0.9058009441879649 0.9310784565567553 0.9926281693950003 0.9151314340977861 0.9293190912634449 1.0 13.087697980984299 -6.388301709718859 4.808569119372838 0.9493358638583262 0.9915406691252829 0.23833426165124416 0.03747788775001782 0.3428384059573806 11.947216223169935 0.006353762231969125 0.01512726856421935 4.089764400522422e-07 6.388301709718859 0.04220480526695669 RT(ph)GSNAAQYK ddPTM_A549_PD325901_60min_R1 1 RTGSNAAQYK 10 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 RT(0.5)GS(0.5)NAAQYK 53.034 0.013577 178360000.0 1665.9 1963.0 1950.2 1897.7 2601.6 2211.0 1775.0 2183.3 2029.1 1950.6 2614.1 True False 1835.020941629238 2128.4288991490994 2082.552299505281 2014.9166190105982 2418.8725910327644 2192.9943490547143 1842.5485963172691 2139.7523687342837 1943.8239833853243 1827.438783108521 2292.5822721452173 0.8004166148908455 0.9283980448638312 0.9083871601068403 0.8788851957427022 1.0550864936983808 0.9565608073042821 0.8037000977911068 0.9333372218446374 0.8478753443236073 0.7971093579985455 1.0 11.162757792304074 -11.020370965338085 1.3164727453745029 0.9998410046752171 0.8995303648151537 0.0 0.09085007541087102 0.5506775312275654 1.7042986647102574 0.048810642544275265 0.01110003292474493 9.541771994561207e-12 11.020370965338085 -0.10031063986006339 RT(ph)GTPSDPR ddPTM_A549_MK2206_60min_R1 3 RTGTPSDPR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 RT(0.588)GT(0.409)PS(0.003)DPR;RT(0.492)GT(0.492)PS(0.016)DPR;RT(0.499)GT(0.499)PS(0.002)DPR 62.823 0.021558 293532200.0 1257.24 1262.6 1052.12 863.96 1435.98 976.5899999999999 976.98 984.6099999999999 1449.22 1589.08 1496.45 True False 1469.4313754331383 1326.8609469993683 1201.3264366098726 1075.6302387846376 1224.7492442312027 1079.932105592023 1154.4846197660434 1124.1814827416615 1120.9739839287915 1230.1057243360094 1124.8401650810697 1.3063468224636459 1.179599545064021 1.0679974576861686 0.9562516277209168 1.0888206895980928 0.9600760526845072 1.026354370696602 0.9994144213908287 0.9965629062045455 1.0935826818091556 1.0 10.135504299946833 -5.5614485185891045 1.5604180110524741 1.0012346900898084 1.3393990103281357 0.8054646549331498 0.044139859167273726 0.12269788033279895 0.4135888561502176 0.004268912713666265 0.05302580699149363 2.7450577242393467e-06 5.5614485185891045 0.3381643202383273 RT(ph)GTPSDPR ddPTM_A549_PD325901_60min_R1 8 RTGTPSDPR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 RT(0.647)GT(0.349)PS(0.004)DPR;RT(0.499)GT(0.499)PS(0.003)DPR;RT(0.499)GT(0.499)PS(0.001)DPR;RT(0.515)GT(0.479)PS(0.007)DPR;RT(0.499)GT(0.499)PS(0.003)DPR;RT(0.65)GT(0.34)PS(0.011)DPR;RT(0.498)GT(0.498)PS(0.005)DPR;RT(0.494)GT(0.494)PS(0.011)DPR 94.616 0.00058235 1064732700.0 8438.559999999998 7545.410000000001 8029.35 7790.63 8481.69 7981.39 7594.339999999999 8434.82 8108.679999999999 9160.54 10247.300000000001 True False 9295.236399060454 8181.2881813187005 8574.269975403915 8271.839521295538 7885.96535464202 7916.392206061417 7883.346764482306 8266.580898111713 7767.900378294276 8582.141941052465 8986.947062986763 1.0343041228476129 0.9103523281019187 0.9540803918515909 0.9204282014037409 0.8774910210744207 0.8808766926719214 0.8771996440204154 0.9198430612947619 0.8643536368748407 0.9549563250904737 1.0 13.13361538870894 -5.257696649119181 24.188011402704554 0.9220171633268199 1.0343041904956904 0.4161768505533824 0.03971087636187251 248.72281529731208 1607301.317307709 0.00733330548945118 0.07531791669646182 5.524631952306009e-06 5.257696649119181 0.11228702716887051 RT(ph)GTPSDPRR ddPTM_A549_MK2206_60min_R1 2 RTGTPSDPRR 10 2 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 RT(0.46)GT(0.46)PS(0.08)DPRR;RT(0.474)GT(0.474)PS(0.053)DPRR 61.375 0.014121000000000002 50205000.0 1947.1599999999999 2146.31 1976.96 2249.5 2119.08 1666.01 1618.04 1121.1599999999999 3307.3 3893.6 3419.0 True False 2275.793004508598 2255.548011368775 2257.3226553247296 2800.6276009838916 1807.3661391283008 1842.306072392066 1912.0169237509974 1280.0878634084988 2558.201830672842 3014.0330557773573 2569.9679404003987 0.8855336164831814 0.8776560889772667 0.8783466205313988 1.0897519603094956 0.7032640799584118 0.7168595543277619 0.743984737589025 0.4980948763154852 0.9954216900753542 1.1727901381165766 1.0 11.32753464699414 -8.926879476595841 24.999999999154834 0.9979964826379786 0.8026200684798479 0.3535066476013816 0.14913123735293812 39.62013742565536 13545.348521812895 0.02495652281216759 0.026568172294311684 1.183369913528416e-09 8.926879476595841 -0.19537641415813067 RT(ph)GTPSDPRR ddPTM_A549_PD325901_60min_R1 2 RTGTPSDPRR 10 2 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 RT(0.462)GT(0.462)PS(0.075)DPRR;RT(0.476)GT(0.476)PS(0.049)DPRR 69.45100000000001 0.0067292 45246000.0 2081.16 1813.3400000000001 1565.99 1643.04 1757.2 1752.75 1518.77 1913.47 1468.1399999999999 2038.5 2072.5 True False 2292.4378311309824 1966.1565257172836 1672.2674984628632 1744.5268491854208 1633.7803340109074 1738.47618512241 1576.5676234528328 1875.304339761824 1406.4391813943776 1909.7887621074126 1817.5956386599444 1.2612474317011038 1.0817348390904307 0.9200437450960066 0.9597992051035098 0.8988689779292395 0.9564702666232922 0.8673918389324405 1.031750021772954 0.7737910190141635 1.0507225707888688 1.0 10.827815562859387 -5.2860394488751234 1.3211226982879727 0.9060434033478542 1.4134972500652234 0.5699365141236443 0.08003206630451784 0.6517389377546644 0.9980849171529786 0.012498212979318319 0.43762402639657405 5.175598175840917e-06 5.2860394488751234 0.5074538467173693 RT(ph)HSDASDDEAFTTSK ddPTM_A549_MK2206_60min_R1 1 RTHSDASDDEAFTTSK 16 1 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 RT(0.439)HS(0.439)DAS(0.122)DDEAFTTSK 74.047 0.00034759 11802000.0 1373.3 1893.1 1467.0 1645.4 2416.0 1647.4 1523.2 1865.5 2899.4 2838.4 2916.1 True False 1605.0794660385686 1989.4507039161301 1675.0426591136775 2048.523073864813 2060.6096004558467 1821.7267745443826 1799.9457233798419 2129.940337854146 2242.69052939039 2197.203468645587 2191.951889734309 0.7322603536855563 0.9076160445096609 0.7641785693191983 0.9345657098856848 0.9400797572731476 0.8310979739455858 0.821161144918202 0.9717094375243429 1.0231476976724299 1.002395845883239 1.0 11.09800041817794 -8.394588732996453 4.1801622363596485 1.0104253803647827 0.8529632533234587 0.586982102275215 0.06161982168504728 0.11732763928351386 3.453307466847116 0.009781496096502158 0.011857536166899201 4.030985788323291e-09 8.394588732996453 -0.157462127041324 RT(ph)HSDASDDEAFTTSK ddPTM_A549_PD325901_60min_R1 1 RTHSDASDDEAFTTSK 16 1 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 RT(0.395)HS(0.377)DAS(0.228)DDEAFTTSK 124.86 2.1206e-08 32190000.0 8115.7 8322.2 8637.3 9014.0 10330.0 8983.8 8456.2 8114.0 8664.9 8374.3 9173.8 True False 8939.599889537434 9023.541000763442 9223.479118304258 9570.77430772067 9604.456436565366 8910.638911369391 8778.005318410194 7952.159904690143 8300.744386001425 7845.545268833024 8045.480757509583 1.1111330893673803 1.1215664138331256 1.1464173983257795 1.189583891402312 1.1937703570542566 1.107533431492242 1.0910479538735929 0.9884008357446713 1.0317275792690923 0.9751493422577712 1.0 12.973962916394141 -7.926207263425391 2.022863473574191 1.0133440165621175 1.1510402884806148 0.8337989087338171 0.030240533469580888 0.0955212206456596 0.7929436914240633 0.004934618630181002 0.007089226774854207 1.1852029849188878e-08 7.926207263425391 0.13769627191849731 RT(ph)KSDTEPQK ddPTM_A549_MK2206_60min_R1 4 RTKSDTEPQK 10 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 RT(0.392)KS(0.392)DT(0.215)EPQK;RT(0.562)KS(0.427)DT(0.012)EPQK;RT(0.473)KS(0.473)DT(0.055)EPQK;RT(0.444)KS(0.444)DT(0.112)EPQK 76.52199999999999 0.00050679 67756000.0 7873.87 6523.6900000000005 4694.75 3501.36 3808.6299999999997 2478.4300000000003 2366.38 2202.93 3310.56 7388.59 7464.4 True False 9202.786758360962 6855.717956067095 5360.536144426678 4359.193357182024 3248.385572261652 2740.695817551316 2796.3206150811393 2515.2020736901814 2560.7234458779894 5719.502387401387 5610.7834730402865 1.6401963830149902 1.221882467753157 0.9553988618851463 0.7769313105964379 0.5789540066677116 0.48846936095828863 0.49838327009363476 0.44828001040775894 0.4563932039406296 1.0193767795323938 1.0 12.453986523187684 -5.543693515578362 1.2035781151002494 0.6685303830128666 1.8203368178375157 0.7227474365808375 0.19235764903972946 0.4770603678095643 0.7963281250779634 0.034971765477992654 0.5996831711564253 2.859607875221199e-06 5.543693515578362 1.151806434824649 RT(ph)LSAPPAQR ddPTM_A549_MK2206_60min_R1 1 RTLSAPPAQR 10 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 RT(0.781)LS(0.219)APPAQR 87.719 0.00044387 7252400.0 582.65 695.42 695.67 504.7 795.34 666.44 783.53 568.82 845.7 760.04 834.59 True False 680.9870755751634 730.8139076210208 794.3264667113923 628.3515226568439 678.3465395805273 736.9622384529312 925.8872588234033 649.4519769381908 654.1503003053915 588.3464361292952 627.3382694877938 1.085518146583298 1.1649439276480171 1.2661852549820374 1.0016151623746428 1.0813090362467135 1.17474459043387 1.4758979387298774 1.0352500533220335 1.0427393515136405 0.937845600603428 1.0 9.293099763767547 -8.482783772435885 24.998226299041793 1.0211724626583045 1.1768067164760678 0.33284612352992593 0.11816449276959451 500.07153746619036 311782.7835833638 0.018936045436976655 0.022890906111051833 3.290154010697316e-09 8.482783772435885 0.1556342538177633 RT(ph)MLLLSRSPEAQPK ddPTM_A549_PD325901_60min_R1 2 RTMLLLSRSPEAQPK 15 2 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 RT(0.689)MLLLS(0.169)RS(0.142)PEAQPK;RT(0.435)MLLLS(0.365)RS(0.2)PEAQPK 55.33 0.0071932 9555900.0 2282.58 2246.05 2378.3 2944.2 2816.29 2940.8 2641.3 2911.7 3012.4 2463.0 2789.3 True False 2514.3058412534165 2435.3325160131603 2539.7057398797106 3126.0565472366566 2618.4835060730575 2916.8510998191314 2741.8161168748197 2853.6238593155394 2885.799303903184 2307.485759661791 2446.2337828295235 1.02782729063007 0.995543652903136 1.0382105576769811 1.2779058850298404 1.0704142524940095 1.1923844402333663 1.120831596767256 1.1665376708250648 1.1796907246392538 0.9432809635196662 1.0 11.256346571279531 -6.01916183868504 24.7902597363278 1.113533430175631 1.0129833313740237 0.20119821300464102 0.0877676567277307 807.3960143861776 1044556.335805443 0.012162658663226529 0.032752253987995264 9.568374419194473e-07 6.01916183868504 -0.10055009880160726 RT(ph)MLPAK ddPTM_A549_MK2206_60min_R1 1 RTMLPAK 7 1 Q9H2D6-2 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 RT(1)MLPAK 46.891000000000005 0.018821 5862400.0 3066.9 2538.1 1278.8 445.54 485.36 481.51 292.84 621.93 641.01 3302.5 5369.8 True False 3584.5177414939826 2667.2784488983834 1460.1530691714863 554.6973200010506 413.96418695250435 532.4630685995303 346.0452374176425 710.090482080744 495.8222584826289 2556.462956314138 4036.3304610593927 0.8880634963057942 0.6608176596616715 0.3617526075375524 0.13742614123211863 0.102559537913517 0.13191761024932971 0.08573263283473029 0.17592476357705622 0.12283985745619383 0.6333631453067788 1.0 11.978828579774028 -10.78466989478102 1.0088040828526774 1.004110300712105 0.27690912224808023 0.332963355361501 0.267080677162682 0.36701160821474044 0.6570916675278684 0.1915260173583082 0.047119325225835 1.6418372519091387e-11 10.78466989478102 -0.7272011784640249 RT(ph)MLPAK ddPTM_A549_PD325901_60min_R1 1 RTMLPAK 7 1 Q9H2D6-2 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 RT(1)MLPAK 45.161 0.022754 10479000.0 5836.5 6574.8 2825.7 2928.3 2415.6 1670.2 1415.4 1971.6 1463.2 5483.5 9905.3 True False 6429.01718339579 7128.881470262611 3017.4689943144645 3109.1744403481753 2245.9365893675995 1656.598444953045 1469.2638215365992 1932.274891309721 1401.7067924150638 5137.270874180039 8687.010894870135 0.7400724209051311 0.8206368745862134 0.34735411648860076 0.3579107333898026 0.2585396307829973 0.1906983270771885 0.16913341531598985 0.22243265430353845 0.161356628808052 0.5913738265499019 1.0 13.084644131554285 -10.845072826921314 1.0882532708168733 1.0004696271015354 0.34588534535680404 0.27527429027038164 0.2408075083684168 0.33430815419483995 0.7019946730774171 0.16574985846437756 0.04045265964143703 1.428654367110286e-11 10.845072826921314 -0.6545842817447314 RT(ph)NSESLR ddPTM_A549_MK2206_60min_R1 1 RTNSESLR 8 1 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 RT(0.851)NS(0.149)ESLR 81.33800000000001 0.011512 21306000.0 366.6 538.35 436.03 523.79 766.56 637.88 628.86 697.44 906.76 839.19 1337.2 True False 428.4731174905258 565.7497155212337 497.86561053397224 652.1185735138262 653.8000394558915 705.3800382095247 743.1157219043114 796.3042558204207 701.3803077981748 649.6163961572324 1005.1363351574768 0.4262835821405223 0.5628586846704696 0.4953214734357112 0.6487861901954399 0.6504590636985174 0.7017754841177952 0.739318335146929 0.7922350709723991 0.6977961926809543 0.6462967991854117 1.0 9.973175484290786 -13.32797182664422 0.06165534072700688 2.1566331689182805 3.347148559289825e-17 0.40878229256293186 0.11195569034476709 41.61488244322889 0.26949377875042596 8.86507408871272 2.393607124605868 4.699245923526785e-14 13.32797182664422 -2.1566331689182805 RT(ph)NSSSSSPVVLK ddPTM_A549_MK2206_60min_R1 1 RTNSSSSSPVVLK 13 1 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;Q7Z589-2 E9PMC9 C11orf30;EMSY Protein EMSY 1 RT(0.443)NS(0.443)S(0.082)S(0.015)S(0.015)S(0.003)PVVLK 92.211 0.00011079 12634000.0 3677.8 3223.0 3288.0 3105.5 4614.9 3527.4 3032.9 3572.1 4712.6 5121.5 5017.6 True False 4298.52272642296 3387.036933453956 3754.2878412854634 3866.347639411191 3936.0543233210647 3900.6671267013835 3583.938671506515 4078.456114097448 3645.2036244758074 3964.5495929637714 3771.5914412848892 1.1397105952066107 0.8980391927870308 0.9954121223709398 1.0251236645329804 1.043605699237706 1.0342231356248177 0.9502457324183434 1.08136211930421 0.9664895260325375 1.0511609368837538 1.0 11.880957688788591 RT(ph)NSTGGSSGSSVGGGSGK ddPTM_A549_MK2206_60min_R1 2 RTNSTGGSSGSSVGGGSGK 19 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 RT(0.563)NS(0.425)T(0.011)GGS(0.001)SGSSVGGGSGK;RT(0.197)NS(0.164)T(0.197)GGS(0.197)S(0.197)GS(0.04)S(0.01)VGGGSGK 71.558 0.0026565 11130700.0 882.58 540.13 777.03 851.11 1218.07 924.68 779.54 518.05 1016.9300000000001 1267.6299999999999 1392.17 True False 1031.5379269906934 567.6203099182392 887.2245381125438 1059.6319882077803 1038.8935165675723 1022.5290238470932 921.1723274707995 591.4851739615866 786.5969787035143 981.2715025927299 1046.4557670626562 0.9857444141056853 0.5424216940497334 0.847837592412467 1.0125912834157424 0.9927734637878574 0.9771354471267104 0.8802783227584283 0.5652271147798755 0.751677236116199 0.9377094889993345 1.0 10.031295615856253 -10.969428546660753 1.3088467840161488 0.9977447520053757 0.8294170589166523 0.08577979289364046 0.1568525270055269 0.7449479246898851 2.317961945986382 0.10747927755473378 0.02631115518639069 1.0729301597175142e-11 10.969428546660753 -0.16832769308872342 RT(ph)NSTGGSSGSSVGGGSGK ddPTM_A549_PD325901_60min_R1 3 RTNSTGGSSGSSVGGGSGK 19 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 RT(0.247)NS(0.2)T(0.247)GGS(0.247)S(0.046)GS(0.013)S(0.001)VGGGSGK;RT(0.319)NS(0.231)T(0.099)GGS(0.173)S(0.173)GS(0.005)SVGGGSGK;RT(0.392)NS(0.392)T(0.096)GGS(0.048)S(0.057)GS(0.014)S(0.001)VGGGSGK 100.79 1.5349000000000001e-09 18667500.0 1593.77 1582.63 1798.24 1561.74 1544.95 1477.46 1492.43 1233.75 1998.3500000000001 2086.21 2179.17 True False 1755.5683571285383 1716.0037843404682 1920.2793800955676 1658.2051328311165 1436.438041788158 1465.4280556103022 1549.225240339032 1209.1418883918477 1914.366298949318 1954.4863445651733 1911.1459048967877 0.9185946256800046 0.8978926098440096 1.004779056991608 0.8676496800073821 0.7516108728840007 0.7667797899969565 0.8106263558264007 0.6326790044097381 1.001685059232934 1.0226777241639886 1.0 10.900222208574395 -8.90223242306046 24.880057166206836 1.0008292580709084 0.8339204682402788 0.4186601662767955 0.09263621519427052 9.870908374178118 2502.179945684057 0.01685009261073854 0.01793825227209005 1.2524707059485475e-09 8.90223242306046 -0.16690878983062962 RT(ph)PDPAK ddPTM_A549_MK2206_60min_R1 2 RTPDPAK 7 1 Q8N6N3-3;Q8N6N3-2;Q8N6N3 Q8N6N3-3 C1orf52 UPF0690 protein C1orf52 1 RT(1)PDPAK;RT(1)PDPAK 89.08 0.0040256 18041000.0 2774.3 2615.2 1892.7 1118.5 2039.8 1730.1 1716.6 2263.5 1731.0 3680.6 2924.7 True False 3242.53401487716 2748.3025095776557 2161.113320316605 1392.5325502113724 1739.748122106721 1913.1780336525665 2028.4839999696928 2584.358056678025 1338.9312638389883 2849.149903712284 2198.416272386384 1.4749408724842563 1.2501283510762815 0.9830318977627986 0.6334253288162647 0.7913642852626003 0.8702528532395772 0.9227024133003575 1.1755544612452766 0.6090435558801502 1.296001098381394 1.0 11.102248872608074 -5.6959421447805605 2.3370715220942735 0.8369478831803543 1.450638724294441 0.3908749690479293 0.20520232615456413 0.17324808008656983 1.760681357904754 0.025298671324171833 0.14919583063361427 2.013992529160717e-06 5.6959421447805605 0.6136908411140867 RT(ph)PDPAK ddPTM_A549_PD325901_60min_R1 2 RTPDPAK 7 1 Q8N6N3-3;Q8N6N3-2;Q8N6N3 Q8N6N3-3 C1orf52 UPF0690 protein C1orf52 1 RT(1)PDPAK;RT(1)PDPAK 81.33800000000001 0.009547 54347000.0 8741.4 7923.2 6880.2 6625.6 8071.9 5783.8 4981.799999999999 5186.299999999999 6973.200000000001 8715.7 9409.099999999999 True False 9628.820492921439 8590.915870472816 7347.1317460036025 7034.848264170635 7504.957590543272 5736.698650412778 5171.385125145559 5082.855177926355 6680.140653956207 8165.389214569331 8251.840349199168 1.166869460078188 1.041090896930229 0.8903628081845565 0.8525187069152833 0.9094889470651986 0.6952023315586223 0.6266947621747718 0.6159662527183576 0.8095334339090197 0.9895234116304459 1.0 13.010500193907967 -5.559393179710314 1.65705633002574 0.8478566126384225 1.1992794437055825 0.4344757245816572 0.12598751725343377 0.5394895481672978 2.1233627492994716 0.02153164595637698 0.2510887518048147 2.7580797539617323e-06 5.559393179710314 0.35142283106716 RT(ph)PEEEFSVGDK ddPTM_A549_MK2206_60min_R1 1 RTPEEEFSVGDK 12 1 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 RT(1)PEEEFSVGDK 64.65 0.003910800000000001 3087900.0 536.15 415.16 353.02 479.89 617.65 639.55 402.39 726.72 903.26 532.37 906.89 True False 626.6390123910131 436.289870708267 403.08354432195665 597.463071543081 526.7945031960076 707.2267565010686 475.499054379474 829.7347854866603 698.6730522098236 412.10724725297746 681.6841841093061 0.9192512119226949 0.6400175930124106 0.5913054075746657 0.8764514205705549 0.7727838132027683 1.0374698034473788 0.6975356997621484 1.2171835651003085 1.0249219044486344 0.6045427734126471 1.0 9.41295970095085 -7.308732558008343 0.9299785062832133 1.0194488603186511 0.7217541733538785 0.0880799924759581 0.18857427638187904 0.36282126152553074 0.6200103489961458 0.022858780285890976 0.05252927947277914 4.912102742221428e-08 7.308732558008343 -0.29769468696477264 RT(ph)PS(ph)DDEEDNLFAPPK ddPTM_A549_PD325901_60min_R1 1 RTPSDDEEDNLFAPPK 16 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 RT(1)PS(1)DDEEDNLFAPPK 50.425 0.0088133 2988300.0 1057.5 1016.2 1166.3 987.44 1273.9 1120.5 1016.5 1287.4 1242.4 1096.7 1157.5 True False 1164.8566215096455 1101.8387403542097 1245.4521315316426 1048.4319261610501 1184.4256587164202 1111.3750195005912 1055.1834637501427 1261.7217970542376 1190.1862485623815 1027.4541748360068 1015.1348379970506 1.1474895530213594 1.0854112174184007 1.2268834492854448 1.032800655555963 1.1667668317377375 1.0948053183687705 1.0394515331895333 1.2429105472763842 1.172441535856185 1.0121356655075135 1.0 9.987455654623874 -10.83511692888624 1.1020389759397964 1.000601536043294 1.1350704578406976 0.3650496713849256 0.06504335912182532 0.4150930562904392 0.9014765837437403 0.042261981918277826 0.010592260013765857 1.4617835527513738e-11 10.83511692888624 0.13446892179740355 RT(ph)PS(ph)PPPR ddPTM_A549_MK2206_60min_R1 1 RTPSPPPR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RT(1)PS(1)PPPR 63.623999999999995 0.004106899999999999 5807500.0 427.0 651.08 547.5 469.15 608.34 446.67 437.93 448.73 602.13 806.3 938.23 True False 499.06716085230386 684.2171910124738 625.1437326957999 584.091771060944 518.8539918631252 493.93632292445074 517.4962123422627 512.3388516779905 465.7485164040266 624.1562700003301 705.2415971693082 0.7076541753286458 0.9701883634754076 0.8864249289959579 0.828215144151119 0.7357109874767687 0.7003788842107549 0.7337857188506518 0.7264728197179678 0.6604098769463449 0.8850247525182326 1.0 9.461973761228055 -4.982997977547284 18.02876752298217 0.8169658170949526 0.4862986058747168 0.07223062479299747 0.1071847722342296 36291685.242342934 809726539.713916 0.01918498290062089 326495805.2820694 1.0399250086128118e-05 4.982997977547284 -0.33066721122023585 RT(ph)PS(ph)PPPR ddPTM_A549_PD325901_60min_R1 2 RTPSPPPR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RT(1)PS(1)PPPR;RT(1)PS(1)PPPR 47.559 0.019546 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RT(ph)PSDDEEDNLFAPPK ddPTM_A549_MK2206_60min_R1 1 RTPSDDEEDNLFAPPK 16 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RT(0.5)PS(0.5)DDEEDNLFAPPK 164.35 5.4996000000000005e-21 93600000.0 4093.0 4881.7 4439.8 4400.9 5738.0 4908.5 4237.7 4480.4 6548.2 6065.6 7442.3 True False 4783.798335757566 5130.157678573434 5069.430400772263 5479.120697563905 4893.947801082635 5427.914212001398 5007.635236322711 5115.510420649536 5065.043155326669 4695.376747257847 5594.171512969258 0.8551397333219115 0.9170540564728706 0.906198601351342 0.9794338062144458 0.8748297741205721 0.9702802639171112 0.8951522535040711 0.9144357495636275 0.9054143484131861 0.8393337130211883 1.0 12.449708771067716 -10.735800765983885 0.7953778632467899 1.0051138300875575 0.9143437830599015 0.0 0.05868747402196582 0.5000013562937755 0.5105916572329553 0.028933761584142844 0.005992784410163292 1.8373810546124776e-11 10.735800765983885 -0.09077004702765601 RT(ph)PSDDEEDNLFAPPK ddPTM_A549_PD325901_60min_R1 1 RTPSDDEEDNLFAPPK 16 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RT(0.5)PS(0.5)DDEEDNLFAPPK 162.49 8.809100000000001e-21 203500000.0 3952.1 4239.6 3367.2 3742.2 4457.1 4660.9 4113.7 4236.0 4203.7 4402.1 4654.1 True False 4353.314282617753 4596.885970877495 3595.7184406184906 3973.347194847164 4144.048672160259 4622.943175716472 4270.249104603014 4151.509656922287 4027.033107760528 4124.150654732915 4081.6752047706873 1.0665508802683692 1.1262253217758793 0.8809418339841917 0.9734599142536111 1.0152813401998937 1.1326092704076864 1.0462001238148297 1.017109262410193 0.986612825796062 1.0104063767525115 1.0 11.99494567058256 -10.28622430565816 0.005856403290186704 2.0654702278112124e-08 2.00188599034433 0.009456522107991971 0.0669961675074853 20347.170846578974 33.48175223364737 5851.663796718201 5593.849079612651 5.173395659162896e-11 10.28622430565816 2.0018859696896274 RT(ph)PSEADR ddPTM_A549_MK2206_60min_R1 1 RTPSEADR 8 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 RT(0.879)PS(0.121)EADR 82.494 0.0021772 185080000.0 994.21 1263.0 1436.7 1054.1 1954.4 1628.8 1527.1 1930.2 2016.2 1615.5 1717.7 True False 1162.0083418992253 1327.2813052908314 1640.4456634959922 1312.3545473203465 1666.910348978026 1801.158534890065 1804.5543028974241 2203.8117609895844 1559.5339192098033 1250.557427986522 1291.1476838917129 0.8999809676277758 1.0279856610130038 1.2705329405474692 1.0164248162260672 1.291029964871027 1.39500582107006 1.3976358594845066 1.7068626528817874 1.2078664111522348 0.9685626544417865 1.0 10.334438312907862 -6.752036523814672 24.898277583946406 1.204090436653636 1.0673779825068752 0.15033933166761404 0.21422781401540456 461.81944999687585 1222864.551374214 0.035043388569658586 0.07219127096127843 1.7699600998452118e-07 6.752036523814672 -0.1367124541467608 RT(ph)PSEADR ddPTM_A549_PD325901_60min_R1 3 RTPSEADR 8 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 RT(0.986)PS(0.014)EADR;RT(0.837)PS(0.163)EADR;RT(0.5)PS(0.5)EADR 65.395 0.005539199999999999 313717300.0 3938.77 3768.46 3460.0600000000004 3681.5600000000004 4816.2 3152.21 4084.5 3031.25 3263.84 3970.37 4235.5 True False 4338.63103083078 4086.0413496115198 3694.8804786310325 3908.9615997705937 4477.926726988009 3126.539446871893 4239.937882624162 2970.789340780376 3126.6721551093365 3719.6801606124177 3714.560351046656 1.1680066066521921 1.1000067204346784 0.9947019645514501 1.0523349280539112 1.2055065213104583 0.8416983845721941 1.1414373389920747 0.7997687640054881 0.8417341110714033 1.0013783083546668 1.0 11.858975750634748 -7.533609944198402 1.4250365723897513 0.9203294546498726 1.0909767653633287 0.29562274865478644 0.11073095389919685 0.36487056741731266 1.4831348286107109 0.018149041587476402 0.0318649651420242 2.9267798460709773e-08 7.533609944198402 0.17064731071345607 RT(ph)PSEADRWLEEVSK ddPTM_A549_MK2206_60min_R1 2 RTPSEADRWLEEVSK 15 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 RT(0.5)PS(0.5)EADRWLEEVSK;RT(0.659)PS(0.341)EADRWLEEVSK 164.89 1.4780000000000003e-20 95202000.0 9643.599999999999 8630.7 7014.0 6327.1 11417.3 9441.4 9379.2 8813.3 13015.3 15899.400000000001 14536.7 True False 11271.203916616569 9069.965765299741 8008.6906687275605 7877.239784034312 9737.83029440586 10440.482681305895 11083.27923366873 10062.612264599271 10067.355331163251 12307.714497387138 10926.836197490042 1.0315157757380522 0.8300633048185682 0.732937743732921 0.7209076480750906 0.8911847966241772 0.9554899966107422 1.0143173223567334 0.9209081277260028 0.9213422027389576 1.1263749428415786 1.0 13.415588116979588 -7.0504449942966865 4.236922897651925 0.9617561829761315 0.8202321630183095 0.3723300654561785 0.09406802029067143 0.1737907378071011 6.554389526289235 0.012095917036800576 0.02195955759028995 8.903381969318467e-08 7.0504449942966865 -0.14152401995782204 RT(ph)PSEADRWLEEVSK ddPTM_A549_PD325901_60min_R1 1 RTPSEADRWLEEVSK 15 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 RT(0.614)PS(0.386)EADRWLEEVSK 142.98 5.7712e-14 32641000.0 2911.6 2827.2 3060.6 2883.4 2402.4 3934.3 2624.3 2923.7 4109.9 4168.6 4564.0 True False 3207.1834885933654 3065.458066059263 3268.310720882915 3061.501069323476 2233.663711830071 3902.2603652130083 2724.1691725720634 2865.3845099017217 3937.1751955622394 3905.3938845822754 4002.6569335797276 0.8012636460764725 0.7658558095104363 0.8165353101995532 0.7648672169826605 0.5580452556628231 0.9749175185301402 0.6805902223890409 0.715870622301647 0.9836404320669757 0.9757003783708073 1.0 11.966742252764956 -8.769505294632902 24.78954430644719 0.9922746771541013 0.7598216028314035 0.5268964315253915 0.09562899481181844 80.24291746557118 246615.42928925992 0.015364269232540419 0.016497749041965652 1.7001792260482562e-09 8.769505294632902 -0.2324530743226978 RT(ph)PSEAER ddPTM_A549_MK2206_60min_R1 2 RTPSEAER 8 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 RT(0.5)PS(0.5)EAER;RT(0.5)PS(0.5)EAER 102.53 0.0013650000000000001 578230000.0 2435.31 2792.16 2837.09 1957.24 3211.31 2008.0700000000002 2912.34 2443.96 3128.22 3664.2 3931.6000000000004 True False 2846.330790386942 2934.269017720383 3239.432023002606 2436.763887863842 2738.9305529966337 2220.562634551013 3441.474480060432 2790.398814313597 2419.683164740843 2836.454675102577 2955.275213360107 0.9631356083248516 0.9928919663573937 1.0961524017654574 0.8245471950794305 0.9267937350181703 0.7513894558829477 1.164519116359225 0.9442094603233085 0.8187674548218122 0.9597937485753034 1.0 11.529076773935088 -6.257381905931766 24.997063191298196 0.917126836847763 1.0149431833396507 0.12943050113573118 0.10710994760887287 561.9993890649972 3462318.1473630206 0.015516038577493936 0.039501852962989026 5.528637231174222e-07 6.257381905931766 0.09781634649188775 RT(ph)PSEAER ddPTM_A549_PD325901_60min_R1 1 RTPSEAER 8 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 RT(0.5)PS(0.5)EAER 74.944 0.015174000000000002 204760000.0 1554.4 1883.0 1838.5 1960.5 2237.2 2072.5 1638.5 2033.9 2058.3 2187.7 2434.6 True False 1712.2015437112007 2041.6870183890755 1963.2716657986134 2081.595632381449 2080.0667899210107 2055.6222471351844 1700.854014121604 1993.3322689363163 1971.7968089310589 2049.5682486447827 2135.159634200966 0.8019079774107627 0.9562221885826956 0.9194964321875269 0.9749133502893509 0.9741973183655784 0.9627487398170363 0.7965933726346925 0.93357528730271 0.9234891749295167 0.9599133553364435 1.0 11.060128220953104 -10.42876778088709 0.7870355707156979 0.9998621870368515 0.9190822992445742 0.13195763580855135 0.06013794654577453 0.8195665636269436 0.922506873831445 0.03808680616417707 0.011365626511900718 3.7259087893365174e-11 10.42876778088709 -0.0807798877922773 RT(ph)PSEAERWLEEVSQVAK ddPTM_A549_PD325901_60min_R1 1 RTPSEAERWLEEVSQVAK 18 2 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 RT(0.5)PS(0.5)EAERWLEEVSQVAK 84.499 3.6267e-05 1661100.0 518.28 669.4 720.06 779.62 719.17 1060.6 716.5 701.0 900.75 846.51 1054.8 True False 570.8954040624297 725.8126872595042 768.9276016725319 827.7753567545149 668.6579802018115 1051.9628252408095 743.7667995838445 687.0180050761386 862.8946099425024 793.0612141337 925.0662869281106 0.6171399954031571 0.7846061385176272 0.8312135168452932 0.8948281528054903 0.7228216935915369 1.1371756166080673 0.8040145988388449 0.7426689468465395 0.9327921924470265 0.8573020391514181 1.0 9.853412937453472 -2.782752398171678 0.1741720643121793 1.006649476891913 7.913850480714147e-20 0.2310704964217516 0.11897321277043271 32.26914638810295 0.42267690462048413 0.1332818823112712 8.145217398490438 0.0016491023168321327 2.782752398171678 -1.006649476891913 RT(ph)PSLALTPPQAEQEVDVLDVNVR ddPTM_A549_MK2206_60min_R1 1 RTPSLALTPPQAEQEVDVLDVNVR 24 1 Q04721 Q04721 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain 1 RT(0.498)PS(0.498)LALT(0.003)PPQAEQEVDVLDVNVR 106.1 4.8131e-11 3598500.0 677.71 799.8 791.2 787.98 830.92 855.47 946.8 859.63 1238.6 896.21 991.76 True False 792.0908795812993 840.506403777994 903.4040571852365 981.035135373766 708.6927687130683 945.9952675849725 1118.8213044222916 981.4851850064647 958.059077637765 693.7555385551227 745.4786208164669 1.0625266204331674 1.1274721773475547 1.2118443533575862 1.315980241390842 0.9506547188930652 1.268977058723555 1.5008093769301263 1.316583947010469 1.285159695912506 0.9306176182427662 1.0 9.54202316859554 -10.78029865173891 1.0823325899350904 1.0028746011801166 1.2318978767771132 0.32850996661190013 0.1405915397635474 0.5549871288770803 1.1764560897313219 0.09324547309220099 0.02473702301917153 1.658446049891922e-11 10.78029865173891 0.22902327559699653 RT(ph)PSTKPTVR ddPTM_A549_MK2206_60min_R1 2 RTPSTKPTVR 10 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RT(0.489)PS(0.489)T(0.018)KPT(0.004)VR;RT(0.498)PS(0.498)T(0.004)KPTVR 58.751999999999995 0.01976 62452000.0 4417.200000000001 5492.700000000001 4989.200000000001 4984.1 6371.200000000001 4665.4 4030.1000000000004 4727.9 5795.5 6925.5 6899.6 True False 5162.715369828566 5772.25496878143 5696.743582038146 6205.204723744751 5434.004919877606 5159.089531358118 4762.317003540639 5398.0943035865 4482.828503511763 5361.024740031362 5186.238900727283 0.9954642407823868 1.11299442221452 1.0984344707374112 1.196474910339085 1.0477737381352752 0.9947651140086589 0.9182602449865555 1.0408495263936854 0.8643698428321769 1.0337018488059946 1.0 12.340472949194233 -7.288713777400058 2.421710481910461 0.9430143279886948 1.1021749909941232 0.3983397489980237 0.06734558627072655 0.1791852755919604 2.062553576923252 0.010619118104729793 0.018754564444965767 5.1438254468532717e-08 7.288713777400058 0.15916066300542842 RT(ph)PSTKPTVR ddPTM_A549_PD325901_60min_R1 2 RTPSTKPTVR 10 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RT(0.494)PS(0.494)T(0.011)KPTVR;RT(0.768)PS(0.227)T(0.004)KPT(0.001)VR 85.554 0.0015445 94534000.0 11234.8 12226.2 12084.8 12470.9 14219.0 13382.3 12184.2 12687.4 12140.8 14278.400000000001 14615.6 True False 12375.348625377372 13256.544781852626 12904.947199805867 13241.199169531143 13220.30649288703 13273.31898568743 12647.876398450071 12434.33985392724 11630.564396769276 13376.85938723302 12817.97385592197 0.9654683934044613 1.0342153081961574 1.00678526457157 1.033018113343525 1.0313881617709169 1.0355239552587392 0.9867297702910112 0.9700706206529288 0.9073637165670997 1.043601706290955 1.0 13.645880611940584 -8.078455628699322 2.7913313984418737 0.9559896026660244 1.0190772830643484 0.06768808207685073 0.038272828368719626 0.2182094857239376 3.3413069197453513 0.006081094119587036 0.008174962364959243 8.347268268718474e-09 8.078455628699322 0.06308768039832402 RT(ph)PT(ph)PPPR ddPTM_A549_MK2206_60min_R1 2 RTPTPPPR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RT(1)PT(1)PPPR;RT(1)PT(1)PPPR 54.25899999999999 0.010251 12410900.0 790.24 548.46 554.8499999999999 433.44000000000005 854.06 830.54 664.6600000000001 760.63 860.13 1078.9099999999999 903.73 True False 923.6131924869426 576.3742713379329 633.5360732169213 539.6328194578612 728.4289053664411 918.427191532167 785.4201185016057 868.4516318316803 665.3119283453666 835.1834816644625 679.3088993208689 1.3596365267852577 0.8484715449983892 0.9326185390038192 0.7943850286627375 1.0723087922073145 1.352002295936876 1.156204665192551 1.2784340565829544 0.9793952780693795 1.2294605333441493 1.0 9.40792394418474 -5.2399480375588645 23.388526065488726 1.0237241164802038 1.3596373592394095 0.16026091277588306 0.17294790905613133 2451.0052846951776 2667272.7243405553 0.023042472128390674 1.3245096411657602 5.755087916606647e-06 5.2399480375588645 0.33591324275920575 RT(ph)PT(ph)PPPR ddPTM_A549_PD325901_60min_R1 1 RTPTPPPR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RT(1)PT(1)PPPR 67.08 0.0035938000000000003 7789200.0 804.77 526.65 373.16 721.39 822.44 669.04 505.31 669.5 562.41 669.25 661.67 True False 886.4696579596381 571.0326437783359 398.4848815933702 765.9486219044398 764.6746516639712 663.5915600595052 524.539848566242 656.1462972874107 538.7738635334586 626.9934407850801 580.2887846717134 1.5276353453240359 0.9840490784280554 0.6867009877139102 1.3199438661179015 1.3177484588067134 1.1435539986093626 0.9039289788497114 1.1307237269088564 0.9284581707679547 1.080485195211534 1.0 9.180627235752224 -7.743079713059511 22.58410439174204 0.9760665867365959 1.1476064341379624 0.10734861715337796 0.21000801689939994 124.04283442567927 152582.30800792223 0.03147909394048539 0.04661819405787798 1.8068424566827122e-08 7.743079713059511 0.17153984740136652 RT(ph)PTAEER ddPTM_A549_MK2206_60min_R1 2 RTPTAEER 8 1 A0A1B0GTY1;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1;F8WCB8 A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 RT(1)PTAEER;RT(0.953)PT(0.047)AEER 57.836000000000006 0.0097961 84478000.0 1220.4099999999999 1234.15 1630.3899999999999 1110.72 851.3900000000001 649.4100000000001 652.0 847.1500000000001 1017.88 2354.5 2244.9 True False 1426.3853718401883 1296.9629635191432 1861.6038179906946 1382.846449862116 726.1516588295133 718.1301351565303 770.4599603752998 967.2361067880679 787.3318052203518 1822.6168147287322 1687.429373911919 0.8453007834831275 0.76860281299503 1.1032188053447192 0.8194988609545791 0.43033010451044645 0.425576410046549 0.45658797475426466 0.573200942061209 0.46658652349704166 1.0801144290284648 1.0 10.720611405172633 -6.533992607537192 24.47553393209546 0.6622377272447002 0.9035573419598367 0.22580493201087026 0.22329434918077543 238.3968843167819 525009.2346678652 0.03643582753655287 0.07590451994438359 2.924202152529817e-07 6.533992607537192 0.24131961471513652 RT(ph)PTAEER ddPTM_A549_PD325901_60min_R1 1 RTPTAEER 8 1 A0A1B0GTY1;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1;F8WCB8 A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 RT(1)PTAEER 77.062 0.0028015 46681000.0 962.15 981.16 1064.0 770.95 1357.7 632.59 701.58 778.37 960.17 1097.8 1021.6 True False 1059.8267597026056 1063.8457965813188 1136.2094383517676 818.5698305455135 1262.3398358107263 627.4383967745463 728.2790108193066 762.8447997305478 919.8173939811184 1028.4847206482796 895.9496764559711 1.182908803421715 1.187394587595008 1.2681621169239892 0.9136337140981597 1.4089405565768518 0.7003054002502114 0.8128570498513883 0.8514371060973709 1.026639573797893 1.1479268843720838 1.0 9.807273891291636 -7.255842502903266 24.999735833711608 0.9632834412638673 1.1806838614400863 0.40495488509769706 0.15807646358597863 426.36753804846387 1904466.8511970625 0.0222087815392927 0.03778986351251192 5.5482688470710656e-08 7.255842502903266 0.21740042017621897 RT(ph)PTMPQEEAAACPPHILPPEK ddPTM_A549_MK2206_60min_R1 1 RTPTMPQEEAAACPPHILPPEK 22 1 Q9NYV4 Q9NYV4 CDK12 Cyclin-dependent kinase 12 1 RT(0.57)PT(0.43)MPQEEAAACPPHILPPEK 85.98200000000001 5.9385e-06 7622800.0 1486.4 1986.0 1366.2 1579.1 2120.8 1909.1 1724.0 1944.9 2282.4 3098.8 2816.2 True False 1737.2679810090513 2087.0789171081465 1559.947703395438 1965.9795708884935 1808.8331294067732 2111.1196948419833 2037.2284841825428 2220.5955310064464 1765.440044243853 2398.778927789933 2116.8598168340445 0.8206816375811284 0.9859315673673479 0.7369159218717095 0.9287244980769648 0.8544888589325895 0.9972883787833215 0.9623823306492739 1.0490045270581725 0.8339900593343155 1.1331779783970408 1.0 11.047710018696 -7.234168840050202 24.115401967692225 0.9385257057285007 0.868433293229544 0.2010667780255765 0.09818184598127958 790.3756338917292 698930.5218503322 0.012819912713302265 0.022200680459963512 5.8321832323300357e-08 7.234168840050202 -0.0700924124989567 RT(ph)PTMPQEEAAACPPHILPPEK ddPTM_A549_PD325901_60min_R1 1 RTPTMPQEEAAACPPHILPPEK 22 1 Q9NYV4 Q9NYV4 CDK12 Cyclin-dependent kinase 12 1 RT(0.96)PT(0.04)MPQEEAAACPPHILPPEK 116.34 2.3042e-15 9826100.0 1678.5 1823.4 1511.9 1479.8 1819.0 1640.1 1690.0 1858.4 1300.2 1563.8 1782.3 True False 1848.900084353607 1977.0643172228558 1614.50662579327 1571.2038851303587 1691.2397152093315 1626.7435693734224 1754.3138748034849 1821.3327541134042 1245.5571155672958 1465.0614011202224 1563.0883989305764 1.1828506216401935 1.2648448536727102 1.0328952776425648 1.0051919560053895 1.0819859685264333 1.040723973440272 1.1223382349992104 1.165214171738151 0.7968564774835978 0.9372863378184999 1.0 10.61018365550923 -8.75276137758483 24.99998179133858 0.9040711118341702 1.1078705238673412 0.5322867518481098 0.08361386383332221 123.48978693633077 355754.6887114059 0.01737760544397888 0.019555280689548614 1.7670084339959322e-09 8.75276137758483 0.20379941203317098 RT(ph)PTMPQEEAAEK ddPTM_A549_MK2206_60min_R1 4 RTPTMPQEEAAEK 13 1 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 RT(0.92)PT(0.08)MPQEEAAEK;RT(0.993)PT(0.007)MPQEEAAEK;RT(0.982)PT(0.018)MPQEEAAEK;RT(0.998)PT(0.002)MPQEEAAEK 103.75 3.7069e-05 123146500.0 5709.900000000001 6666.099999999999 6346.599999999999 6021.200000000001 8021.700000000001 6718.1 6687.0 7310.4 8930.599999999999 9108.8 9565.2 True False 6673.591526347939 7005.376016784805 7246.643313108979 7496.3942703019375 6841.718556281738 7429.004882886138 7901.94134206999 8346.671587161056 6907.8333592377085 7051.115753663651 7189.896853909884 0.928190162104874 0.9743360939837772 1.0078925275775321 1.042628903114984 0.9515739509616461 1.033256113938022 1.0990340338155051 1.1608889190979303 0.9607694657651745 0.9806977620032528 1.0 12.811755358606202 -5.424478152371293 2.3719740371077034 1.0077741646717318 0.9225093530925921 0.15227357215382864 0.06017573270922063 0.7096661109963872 5.999802509443665 0.009254296995535665 0.10615005403145945 3.762892814093248e-06 5.424478152371293 -0.08526481157913968 RT(ph)PTMPQEEAAEK ddPTM_A549_PD325901_60min_R1 6 RTPTMPQEEAAEK 13 1 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 RT(0.999)PT(0.001)MPQEEAAEK;RT(0.821)PT(0.179)MPQEEAAEK;RT(0.999)PT(0.001)MPQEEAAEK;RT(0.999)PT(0.001)MPQEEAAEK;RT(0.999)PT(0.001)MPQEEAAEK;RT(0.999)PT(0.001)MPQEEAAEK 157.42 1.2656e-18 264373100.0 24123.1 26489.9 25728.700000000004 26838.799999999996 32462.399999999998 26493.2 26906.899999999998 29396.1 28302.600000000002 29875.799999999996 31543.899999999998 True False 26572.05935351238 28722.29683931212 27474.804301241667 28496.571720662694 30182.35301320033 26277.448162992452 27930.85680352063 28809.771724705675 27113.14014694274 27989.43688936407 27664.20027325715 0.9605215076178965 1.0382478638675063 0.9931537521365268 1.0300883972492851 1.091025683557441 0.9498719609977209 1.009639047130571 1.0414098885972838 0.9800803883404822 1.0117565884028583 1.0 14.7557325979811 -8.787951299410677 24.98118300035258 0.9905935166612868 1.0151300482172696 0.030293822048832353 0.03767042332500668 407.34754552833834 383826.9318471191 0.006167329909200082 0.006566544764515443 1.629478747662268e-09 8.787951299410677 0.024536531555982788 RT(ph)QSGNFYTDTLGMAEFR ddPTM_A549_MK2206_60min_R1 4 RTQSGNFYTDTLGMAEFR 18 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2 E9PP16 PPFIBP2 Liprin-beta-2 1 RT(0.487)QS(0.487)GNFYT(0.026)DTLGMAEFR;RT(0.494)QS(0.494)GNFYT(0.011)DTLGMAEFR;RT(0.5)QS(0.5)GNFYTDTLGMAEFR;RT(0.5)QS(0.5)GNFYTDTLGMAEFR 102.45 4.2948000000000005e-09 15708200.0 2710.53 3114.93 3107.54 2938.6899999999996 4579.77 3483.1 3132.21 3049.2099999999996 4460.81 4408.25 4685.38 True False 3168.00119790397 3273.4666320582487 3548.235899728778 3658.669181922805 3906.091899784635 3851.679330105343 3701.2920130170514 3481.444855313986 3450.443657449798 3412.423263337411 3521.8708360904398 0.8995222554557698 0.9294681106738316 1.0074860961305456 1.0388425221136792 1.1090957282580844 1.0936458233036783 1.0509448487116533 0.9885214470780167 0.9797189670022278 0.968923456354088 1.0 11.782126284248923 -5.699079944546773 3.4665354146555036 1.0132925524709229 0.905645395921829 0.47189311329672246 0.04437361447850312 0.19062483478749412 4.473479118157381 0.007172292960327569 0.032289179157388825 1.999493770697035e-06 5.699079944546773 -0.10764715654909385 RT(ph)QSGNFYTDTLGMAEFR ddPTM_A549_PD325901_60min_R1 2 RTQSGNFYTDTLGMAEFR 18 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2 E9PP16 PPFIBP2 Liprin-beta-2 1 RT(0.5)QS(0.5)GNFYTDTLGMAEFR;RT(0.604)QS(0.395)GNFYTDTLGMAEFR 156.89 8.392200000000001e-23 16900900.0 1527.76 1577.4099999999999 1717.09 1829.62 2075.5699999999997 2624.1000000000004 2115.74 1937.75 1878.97 1881.5700000000002 2090.92 True False 1682.8570705225318 1710.3438766208772 1833.622053100976 1942.6314720314967 1929.7891235277816 2602.730199617583 2196.255643477351 1899.100056114532 1800.0034251941852 1762.767349089256 1833.7500954339457 0.9177134194636778 0.9327028153288983 0.9999301746005148 1.0593763440660027 1.0523730187297462 1.4193483649153746 1.1976853601513355 1.0356373318498024 0.9815969088024644 0.9612909378865542 1.0 10.840581325643003 -3.709169196618169 12.701102913651416 1.0325018359414495 0.6673645453804822 0.0 0.13849141070185483 0.0 0.0 0.0191756900099143 0.0 0.0001953578213723111 3.709169196618169 -0.36513729056096733 RT(ph)QSIQGK ddPTM_A549_MK2206_60min_R1 1 RTQSIQGK 8 1 Q53HL2 Q53HL2 CDCA8 Borealin 1 RT(0.692)QS(0.308)IQGK 54.608000000000004 0.013955 2702900.0 1292.4 1816.1 1388.3 1046.7 1491.5 1086.4 928.94 1258.0 1927.9 2284.8 2325.3 True False 1510.5255238536713 1908.5317328097206 1585.1818157106477 1303.1415469881485 1272.1023257781032 1201.3621269060443 1097.7163736058756 1436.325352463422 1491.2337282236772 1768.6620931374841 1747.8638349848045 0.8642123566031695 1.0919224338927482 0.9069252329512435 0.7455623950245974 0.7278040201507817 0.6873316461270501 0.6280331177030268 0.8217604390652714 0.8531750004637184 1.0118992439435996 1.0 10.77137708263341 -9.981657724170054 0.905514172418891 0.9837922862298529 0.8114566128298687 0.27693543760924255 0.11833911953356492 0.5958082844226167 0.9914601779721124 0.05197082168481198 0.02618841228955029 1.0431392235899989e-10 9.981657724170054 -0.17233567339998423 RT(ph)QSIQGK ddPTM_A549_PD325901_60min_R1 1 RTQSIQGK 8 1 Q53HL2 Q53HL2 CDCA8 Borealin 1 RT(0.729)QS(0.271)IQGK 61.65 0.0066278000000000005 4275400.0 2395.6 2280.0 2105.7 2335.9 2568.3 2393.4 1708.1 2169.7 2011.4 2753.6 2987.1 True False 2638.7995484524904 2472.143601660697 2248.6054646027424 2480.183237786191 2387.9114681540023 2373.9089439292416 1773.1026802081853 2126.4236314032764 1926.8678528319158 2579.7372260676834 2619.70563678703 1.0072885714323532 0.9436722839947346 0.858342797384126 0.946741192200526 0.9115190022199157 0.9061739267930695 0.6768327919402536 0.8117032698418951 0.7355283837138078 0.9847431672634921 1.0 11.355188997109524 -7.5389499381967156 24.98650800867656 0.8499962922498514 0.9284570809392328 0.17691392989375654 0.09399991027362942 460.29063372882445 715629.302069989 0.017719036085045804 0.026285427676377114 2.8910131147564145e-08 7.5389499381967156 0.07846078868938144 RT(ph)SEEDTPK ddPTM_A549_MK2206_60min_R1 1 RTSEEDTPK 9 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.496)S(0.496)EEDT(0.007)PK 56.205 0.0099205 35333000.0 1709.8 1800.1 1642.3 1514.1 888.77 421.97 498.88 513.32 613.98 2325.9 2588.5 True False 1998.37243940344 1891.717401151245 1875.2028350800226 1885.0545679705317 758.0331103464996 466.6225853189836 589.5200383926835 586.0846819765691 474.91451032458815 1800.477574592295 1945.7040110343457 1.0270690855702638 0.9722534313662635 0.9637657241006332 0.968829049680803 0.389593230032725 0.2398219784061219 0.30298546698235557 0.30121985597645123 0.2440836363759775 0.9253604681809503 1.0 10.926076542421672 -6.747579897563292 23.620987455161114 0.5372768295707369 0.9808411331630734 0.4749900739463666 0.2475765786589048 123.0272447396242 209674.77919590272 0.04696364628602602 0.0972977821294898 1.788216518973842e-07 6.747579897563292 0.44356430359233656 RT(ph)SEEDTPK ddPTM_A549_PD325901_60min_R1 2 RTSEEDTPK 9 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.5)S(0.5)EEDTPK;RT(0.5)S(0.5)EEDTPK 108.68 0.00026805 144031000.0 9548.2 9250.2 8861.6 8648.6 10713.2 8358.0 8096.9 9610.0 8780.4 9583.3 11870.599999999999 True False 10517.526234986666 10029.746817579718 9463.001465129732 9182.804379604291 9960.741790533604 8289.93521908607 8405.031960293685 9418.321011100847 8411.390322663494 8978.208802503794 10410.59145393329 1.0102717296636374 0.9634175792952011 0.9089782753461578 0.8820636579812071 0.9567892309106295 0.7962981984038955 0.8073539334903137 0.9046864486784228 0.8079646924849342 0.862411020760178 1.0 13.34576441393291 -5.562437217702188 1.7488831239073972 0.893425528244836 1.0200593134701446 0.3094207734403637 0.060887299475215366 0.7169673998947705 3.2567461705493086 0.011376676753646044 0.12362683516783925 2.738815533156931e-06 5.562437217702188 0.12663378522530855 RT(ph)SFLEGTLR ddPTM_A549_MK2206_60min_R1 1 RTSFLEGTLR 10 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 RT(0.899)S(0.101)FLEGTLR 104.17 0.00021776 4641800.0 399.81 524.9 316.24 385.61 475.78 292.16 358.56 316.52 467.44 537.25 472.4 True False 467.2881535839806 551.6151679708289 361.0875872652418 480.08446731069085 405.79339226195486 323.0761772798876 423.7057107241833 361.3876793018464 361.5655863482938 415.8848518636703 355.0900424232666 1.3159708743028453 1.553451525157962 1.0168902084695073 1.3520076880624863 1.1427901201978792 0.9098429656745526 1.1932345605431733 1.0177353237945013 1.0182363433253032 1.171209558639035 1.0 8.47204109407054 -6.020052314491292 0.523898212955577 1.0068270589063115 1.5295018055616567 0.3989264600900696 0.14143671032286842 1.1436855859914907 0.3324673729637125 0.02383915252018101 0.31416276280750965 9.54877555910587e-07 6.020052314491292 0.5226747466553452 RT(ph)SFLEGTLR ddPTM_A549_PD325901_60min_R1 1 RTSFLEGTLR 10 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 RT(0.5)S(0.5)FLEGTLR 145.0 2.5712000000000002e-08 13273000.0 665.8 514.04 773.72 638.73 986.16 698.39 597.63 733.1 1015.4 1002.2 535.24 True False 733.3915258639456 557.3599548235366 826.2292919563253 678.1829014389208 916.8955236673095 692.7025433904666 620.3731366856845 718.4777453941757 972.7262691486169 938.9209209634778 469.40887316591005 1.562372523803427 1.1873656138292483 1.760148431758125 1.444759441518313 1.9532982354665411 1.4756912001227438 1.3216050487107365 1.53060111656695 2.0722366464615423 2.000219796935158 1.0 8.87470130294272 -11.11018568568354 1.470747167588828 1.001681120020682 1.642597238709282 0.0 0.38501964828241086 0.32598303274550144 1.2665766680181834 0.20181353338771485 0.044314973716448554 7.759152976136313e-12 11.11018568568354 0.6409161186885999 RT(ph)SFSFQK ddPTM_A549_MK2206_60min_R1 2 RTSFSFQK 8 1 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 RT(0.598)S(0.402)FSFQK;RT(0.807)S(0.193)FSFQK 83.499 0.0020616999999999996 55438000.0 5562.7 6339.9 6092.4 5690.3 8330.3 5928.6 5039.0 6035.700000000001 8960.2 8330.3 7909.1 True False 6501.54776504241 6662.5738300976545 6956.393930732224 7084.42375544727 7104.92390508168 6555.960516913823 5954.521074127511 6891.278958556029 6930.729006499197 6448.479444355384 5945.052189944658 1.093606507952781 1.1206922356992255 1.1701148633309106 1.1916503891134418 1.195098659873635 1.1027591192559156 1.0015927335673973 1.1591620625655399 1.1657978408030956 1.0846800395229856 1.0 12.537473759703472 -7.506665213392086 23.408256978097416 1.0810899927762918 1.154690179462803 0.2773468189017916 0.055843006848276464 414.37777142737934 598257.1504057471 0.01102779019660554 0.017320972946035584 3.114116005159542e-08 7.506665213392086 0.07360018668651125 RT(ph)SFSFQK ddPTM_A549_PD325901_60min_R1 3 RTSFSFQK 8 1 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 RT(0.69)S(0.31)FSFQK;RT(0.499)S(0.499)FS(0.002)FQK;RT(0.631)S(0.369)FSFQK 99.815 0.0014820999999999999 151046000.0 8819.400000000001 9826.8 10597.2 10422.0 12621.5 10697.2 10466.5 11334.8 11766.7 11321.8 11953.5 True False 9714.738995500868 10654.938923157593 11316.389718140379 11065.743269920673 11735.009381811202 10610.08554984536 10864.808384988557 11108.71852202142 11272.186518801482 10606.939615809526 10483.295279479691 0.926687528731236 1.0163730620097942 1.0794687563834449 1.0555596284291526 1.119400824737013 1.0120945053044392 1.0363924792098198 1.059659031427451 1.0752522196780996 1.0117944151179123 1.0 13.355804659029305 -5.314175525152562 3.319294467936364 1.0454834299657763 0.9170675767018385 0.5285549304699784 0.03345541552305013 0.1884652649932194 3.399863014952267 0.005160510050183035 0.056594989580338304 4.850924048153365e-06 5.314175525152562 -0.12841585326393778 RT(ph)SFSTSDVSK ddPTM_A549_MK2206_60min_R1 1 RTSFSTSDVSK 11 1 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 RT(0.59)S(0.408)FS(0.001)T(0.001)S(0.001)DVSK 70.41199999999999 0.009395 7974300.0 2828.3 2819.9 2494.9 2721.5 4021.0 3068.6 2932.0 3219.1 4724.0 4402.5 4524.6 True False 3305.6478947039145 2963.420865233263 2848.7143355301396 3388.2676221727775 3429.516226586491 3393.3172152281745 3464.706447577267 3675.4172830802913 3654.0215426778636 3407.972192330957 3401.0169473926994 0.9719586658449623 0.8713337543069558 0.8376066275453381 0.9962513197031565 1.0083796345724299 0.9977360500451409 1.0187266047684336 1.0806818489681311 1.0743908657906347 1.0020450485974761 1.0 11.731750479728273 -6.439283001808502 4.275782062724389 1.032973068980862 0.8920073667398465 0.667619700665586 0.040542044794749356 0.10248948082597528 3.3902780268074992 0.006286364160425679 0.014968113416413685 3.6367797332900956e-07 6.439283001808502 -0.14096570224101557 RT(ph)SFYLPK ddPTM_A549_MK2206_60min_R1 2 RTSFYLPK 8 1 Q9NS23-3;Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23 Q9NS23-3 RASSF1 Ras association domain-containing protein 1 1 RT(0.5)S(0.5)FYLPK;RT(0.5)S(0.5)FYLPK 64.73 0.0057326 6402800.0 1681.71 2255.48 2800.5 2465.39 3466.2000000000003 2727.0 2345.5 2973.5 3998.3 3215.4 2946.7 True False 1965.5415341380035 2370.2742980660023 3197.653010802901 3069.4106606755636 2956.326571647376 3015.569329963904 2771.646989356236 3395.002730961833 3092.6914339730974 2489.038906807714 2214.953065217271 0.8873964712860396 1.070123938645849 1.443666261383843 1.3857678110097904 1.334712964383912 1.361459697417154 1.2513344110451194 1.532765088468729 1.396278540859161 1.1237434083342785 1.0 11.113060413105723 -3.6847255549001297 15.68710786911937 1.2399194682159982 1.244880031168705 0.0 0.1956435906567872 0.0 0.0 0.02914265961878176 0.0 0.0002066685750573834 3.6847255549001297 0.0049605629527067485 RT(ph)SFYLPK ddPTM_A549_PD325901_60min_R1 2 RTSFYLPK 8 1 Q9NS23-3;Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23 Q9NS23-3 RASSF1 Ras association domain-containing protein 1 1 RT(0.5)S(0.5)FYLPK;RT(0.5)S(0.5)FYLPK 71.221 0.0038458 12776500.0 4017.2 4543.8 5288.1 4752.799999999999 5540.6 6151.799999999999 5396.0 5882.9 6922.3 5440.8 5368.5 True False 4425.023186693663 4926.721972467488 5646.982265928555 5046.369661608035 5151.447370032343 6101.701780422789 5601.347732804502 5765.5609444542315 6631.379803946689 5097.266959467266 4708.208533725409 0.9398528453012948 1.0464111640716087 1.1993908565176346 1.0718237362386014 1.0941417172013443 1.2959710124807846 1.1896983093848625 1.2245763761640742 1.408471981741122 1.082634068341491 1.0 12.200962505613814 -7.103401090401672 7.256203808003789 1.2061144400232655 1.07396991385829 0.24538290144179264 0.11356500666090788 0.4162973160483726 25.73123001305697 0.022938519367677327 0.03990715484483244 7.88131906294553e-08 7.103401090401672 -0.1321445261649754 RT(ph)SHGEPK ddPTM_A549_MK2206_60min_R1 2 RTSHGEPK 8 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 RT(0.5)S(0.5)HGEPK;RT(0.5)S(0.5)HGEPK 47.302 0.023366 28998000.0 8245.6 7205.9 5791.5 4824.6 6926.4 6595.9 7269.5 8128.6 7530.799999999999 10281.0 9766.3 True False 9637.255694435024 7572.649531112585 6612.821786132829 6006.627216584521 5907.5357353466 7293.873759995933 8590.274052067862 9280.853942793465 5825.085824216442 7958.514959535396 7341.058173832237 1.3127883564235683 1.031547407988929 0.9007995345554866 0.8182236231277397 0.8047253673052833 0.9935725323626372 1.1701683665562752 1.2642392585684414 0.793494028555775 1.084110052131739 1.0 12.841772319407376 -5.304038036896862 2.7952435574953696 0.9367698041775938 1.3632631039034013 0.24921378592940735 0.14908517195682616 0.3484155089250568 3.9158890133175372 0.021965987284364854 0.3219069171624111 4.965488302144293e-06 5.304038036896862 0.4264932997258075 RT(ph)SHGEPK ddPTM_A549_PD325901_60min_R1 1 RTSHGEPK 8 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 RT(0.5)S(0.5)HGEPK 72.434 0.0022983 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RT(ph)SIHDFLTK ddPTM_A549_MK2206_60min_R1 2 RTSIHDFLTK 10 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 RT(0.5)S(0.5)IHDFLTK;RT(0.5)S(0.5)IHDFLTK 80.469 0.00045224 17368700.0 1596.1399999999999 1815.63 1945.6299999999999 1480.09 2595.0 1950.94 1808.7 1414.53 2548.8 2679.09 2279.4300000000003 True False 1865.529410123645 1908.0378118172525 2221.54959021905 1842.712116443765 2213.278937575714 2157.3871758708397 2137.317377807983 1615.0439593164429 1971.5008695972351 2073.881708291187 1713.3846219324016 1.0887978018733764 1.1136074103812814 1.2965854611870662 1.0754807139365499 1.2917583765164868 1.2591377022152095 1.2474241629398184 0.942604444234449 1.150646996804327 1.2104005614058837 1.0 10.742633329760892 -10.24536170521975 0.4058388270682281 0.9744069042189268 1.185697894397297 0.0 0.11700076469305577 1.6673000108555824 0.45239836413853685 0.1459475503008228 0.03365809799383935 5.683793549095522e-11 10.24536170521975 0.21129099017837005 RT(ph)SIHDFLTK ddPTM_A549_PD325901_60min_R1 2 RTSIHDFLTK 10 1 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 RT(0.5)S(0.5)IHDFLTK;RT(0.5)S(0.5)IHDFLTK 70.622 0.0011526 17351300.0 1412.27 1258.8400000000001 1341.9099999999999 980.89 1608.46 1715.81 1538.03 1629.29 1706.8000000000002 1718.0900000000001 1938.06 True False 1555.6426107417751 1364.926864699364 1432.9800821603574 1041.4773475371799 1495.4873184857622 1701.8370122349918 1596.560573292309 1596.7925327967216 1635.0691315568833 1609.6095041889268 1699.6909063745682 0.9152502992793864 0.8030441650186538 0.84308274921403 0.6127451430322973 0.8798583982987994 1.0012626447858106 0.939324066101974 0.9394605376825083 0.9619802785463372 0.9470013036795116 1.0 10.731056696681096 -7.001123627350951 24.99994732896396 0.9743138533777093 0.791318591137663 0.561370828099683 0.07057408006667404 21.644351914160072 481596.26077488804 0.00978855979589319 0.018331047514083154 9.974160964520855e-08 7.001123627350951 -0.18299526224004625 RT(ph)SLGEVSK ddPTM_A549_PD325901_60min_R1 1 RTSLGEVSK 9 1 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 RT(0.774)S(0.226)LGEVSK 77.279 0.001189 6233900.0 1831.7 2003.3 1734.1 2347.1 2561.5 2164.5 1997.3 1803.6 2463.1 2382.5 2362.9 True False 2017.6528355737296 2172.1251215819616 1851.7864539904142 2492.075036349145 2381.589076695276 2146.8730296376875 2073.3083444644967 1767.6257831031717 2359.5844726609803 2232.068543400007 2072.2782796572187 0.9736399089737481 1.0481821591747122 0.8935993163508539 1.202577405174254 1.1492612261945927 1.035996492706958 1.000497068766 0.8529866864191423 1.1386426696762395 1.0771084971122795 1.0 11.017002035622847 -6.228102281468593 24.9693744208446 1.0581833667411469 0.9794446776668763 0.1388050306912022 0.0941061363783196 1149.7653468992307 861169.2708471587 0.01389605109186795 0.036762891488546494 5.914223308435795e-07 6.228102281468593 -0.07873868907427062 RT(ph)SLGEVSKGDTMENLDGK ddPTM_A549_MK2206_60min_R1 5 RTSLGEVSKGDTMENLDGK 19 2 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 RT(0.5)S(0.5)LGEVSKGDTMENLDGK;RT(0.5)S(0.5)LGEVSKGDTMENLDGK;RT(0.5)S(0.5)LGEVSKGDTMENLDGK;RT(0.5)S(0.5)LGEVSKGDTMENLDGK;RT(0.569)S(0.431)LGEVSKGDTMENLDGK 203.25 2.6854999999999998e-55 131453800.0 20962.699999999997 21974.4 21001.0 18210.9 26856.5 19424.8 18720.5 18577.0 28899.0 29299.1 29228.000000000004 True False 24500.69127119108 23092.803099748882 23979.25758967032 22672.57131751837 22905.944426590417 21480.319442861324 22121.77252792302 21210.346639676478 22353.422642220074 22680.41296089131 21969.880948237173 1.1151945396935332 1.0511118905995624 1.0914605157018102 1.0319842593110446 1.0426066704939678 0.9777166973945242 1.006913627799974 0.9654283830508587 1.0174576136705773 1.0323411862962848 1.0 14.423239431565841 -6.534415419938098 1.2884633690947649 1.003179399488574 1.0874426157240402 0.6871355457884042 0.023935244893742227 0.18399023101183162 0.5854299871651463 0.0032416199340024572 0.010952468176562079 2.921356647165936e-07 6.534415419938098 0.08426321623546618 RT(ph)SLGEVSKGDTMENLDGK ddPTM_A549_PD325901_60min_R1 7 RTSLGEVSKGDTMENLDGK 19 2 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 RT(0.5)S(0.5)LGEVSKGDTMENLDGK;RT(0.499)S(0.499)LGEVS(0.003)KGDTMENLDGK;RT(0.5)S(0.5)LGEVSKGDTMENLDGK;RT(0.5)S(0.5)LGEVSKGDTMENLDGK;RT(0.88)S(0.12)LGEVSKGDTMENLDGK;RT(0.5)S(0.5)LGEVSKGDTMENLDGK;RT(0.567)S(0.432)LGEVSKGDTMENLDGK 207.07 4.1925e-56 284331000.0 43479.0 45115.0 47497.6 46288.1 51231.09999999999 49369.100000000006 50381.99999999999 55622.3 53287.9 56542.7 63637.100000000006 True False 47892.956072451896 48916.99938110626 50721.07276227153 49147.21080909756 47632.804273700305 48967.05441787295 52299.31458008827 54512.869591649775 51048.39487666393 52972.58427236245 55810.14012881387 0.8581407601183487 0.8764894563640632 0.9088146463206076 0.8806143596067348 0.8534793885799304 0.8773863370501026 0.937093410971154 0.9767556480924452 0.9146795682440595 0.9491569838401743 1.0 15.768239648279422 -14.999999999999998 0.0885329965472557 1.3525463484781772 0.8041424143614216 0.5910403813616051 0.029705329165829863 54.32265020774249 0.35165407058050024 3.63024396391368 0.29790019042725646 1.000000000000004e-15 14.999999999999998 -0.5484039341167556 RT(ph)SLPCIPR ddPTM_A549_MK2206_60min_R1 1 RTSLPCIPR 9 1 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 RT(0.636)S(0.364)LPCIPR 83.397 0.00088703 5742100.0 541.99 518.02 403.54 308.95 645.27 543.55 290.6 368.0 653.45 584.65 601.76 True False 633.4646616167221 544.3850053576851 460.7680399855037 384.6427638692925 550.3516377840006 601.0681002207114 343.39825841267225 420.16512695273394 505.44461834522673 452.57715894294057 452.3263842688927 1.4004592339679853 1.2035225542670682 1.0186627532909793 0.8503655264129705 1.2167135434152239 1.328837143100184 0.7591824628309403 0.9288981177426963 1.117433419591896 1.000554410891713 1.0 8.821220340826327 -7.731120414403747 24.999720091680956 1.0251574872845515 1.1520428823353472 0.24397974958990476 0.1646927611730119 363.8452567786814 300010.58492562553 0.026494526751423015 0.03929508246372467 1.8572894234368874e-08 7.731120414403747 0.12688539505079577 RT(ph)SMGGTQQQFVEGVR ddPTM_A549_MK2206_60min_R1 7 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RT(0.499)S(0.499)MGGT(0.002)QQQFVEGVR;RT(0.491)S(0.491)MGGT(0.019)QQQFVEGVR;RT(0.487)S(0.487)MGGT(0.027)QQQFVEGVR;RT(0.333)S(0.333)MGGT(0.333)QQQFVEGVR;RT(0.576)S(0.389)MGGT(0.034)QQQFVEGVR;RT(0.5)S(0.5)MGGTQQQFVEGVR;RT(0.5)S(0.5)MGGTQQQFVEGVR 230.62 1.978e-55 276013200.0 18839.199999999997 19034.0 18450.3 17561.6 27466.899999999998 20715.9 19576.5 21118.799999999996 28479.2 28417.199999999997 30590.7 True False 22018.79638578154 20002.749299212734 21066.829975081873 21864.192788370176 23426.555395182408 22908.042787898517 23133.29664767955 24112.45457361249 22028.706671937223 21997.73478339747 22994.184929630435 0.9575810777014321 0.8699046893998438 0.9161807665526356 0.9508574822409058 1.018803469958825 0.9962537423267865 1.006049865149595 1.0486327150714112 0.958012068675281 0.9566651242789244 1.0 14.488981439245082 -6.465588789691348 3.324959644518387 0.9904400186847621 0.9105685271363243 0.5724149286779039 0.031300534408794455 0.1427166580189965 3.1144180979900935 0.004547590329897149 0.011024250639150671 3.4230339797336206e-07 6.465588789691348 -0.07987149154843776 RT(ph)SMGGTQQQFVEGVR ddPTM_A549_PD325901_60min_R1 2 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RT(0.495)S(0.495)MGGT(0.01)QQQFVEGVR;RT(0.483)S(0.483)MGGT(0.034)QQQFVEGVR 92.427 2.6776e-06 336680000.0 16608.5 16478.9 19195.8 17753.5 22040.0 18951.2 20547.2 22083.6 21367.0 22433.7 26497.0 True False 18294.58269346851 17867.63473570459 20498.54242172262 18850.09337387609 20491.98643387228 18796.86771045034 21329.134939859276 21643.12527375095 20469.01929574403 21017.23235344081 23238.0369783221 0.7872688519488478 0.7688960454091988 0.8821116190169139 0.8111740846036454 0.8818294958816225 0.808883630230266 0.9178544194484427 0.9313663324462826 0.8808411534433316 0.9044323482679283 1.0 14.504200582489217 -14.999999999999725 0.02333778032590063 2.152438868150497 1.4895892178078753e-13 0.5651147159714811 0.04392651169586232 563.6831561370701 1.0205113241892432 66.03148348329654 33.317340921501874 1.000000000000634e-15 14.999999999999725 -2.152438868150348 RT(ph)SNERPGSGQGQGR ddPTM_A549_MK2206_60min_R1 1 RTSNERPGSGQGQGR 15 2 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RT(0.495)S(0.495)NERPGS(0.01)GQGQGR 40.179 0.037181 7070400.0 100.53 166.53 116.38 185.21 139.54 206.17 205.26 115.06 137.9 169.21 284.02 True False 117.49700627747563 175.00566569285985 132.88443399294468 230.58645831439284 119.01385084752025 227.98677255543006 242.55308507152466 131.37010735647172 106.66587018104946 130.98534347855116 213.48999544677432 0.5503630558030954 0.8197370810122618 0.622438694210729 1.0800808620181028 0.5574680471488036 1.0679037773096491 1.1361332626567793 0.6153454970175589 0.49962936182479134 0.6135432398339594 1.0 7.738024653730509 RT(ph)SNERPGSGQGQGR ddPTM_A549_PD325901_60min_R1 2 RTSNERPGSGQGQGR 15 2 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RT(0.5)S(0.5)NERPGSGQGQGR;RT(0.5)S(0.5)NERPGSGQGQGR 159.18 4.7796e-20 226790000.0 2312.6 2443.0 2129.0 1933.65 2839.2 2132.1 1919.35 1618.4099999999999 2003.52 2802.8 2580.4 True False 2547.3734495538597 2648.880183709246 2273.486742717026 2053.0871688622237 2639.784386708265 2114.7368844955017 1992.3919145586199 1586.1295429319157 1919.3190218284783 2625.8307296711587 2263.0271585033147 1.1256486427845618 1.170503046663002 1.004621943742217 0.9072304594965896 1.1664837413856421 0.93447260522234 0.880410076861966 0.7008884259174888 0.8481201891973084 1.1603178158090641 1.0 11.14403818309939 -7.427489301273578 6.62045815571189 0.9027089201971263 1.066602226726101 0.2678887007079286 0.12562054252646554 0.23019824940883662 13.629689834040644 0.01698986124012016 0.027197716026228964 3.73689331003742e-08 7.427489301273578 0.1638933065289747 RT(ph)SPGGFK ddPTM_A549_MK2206_60min_R1 1 RTSPGGFK 8 1 Q5MIZ7-5;Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7 Q5MIZ7-5 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B 1 RT(0.5)S(0.5)PGGFK 42.743 0.047024 9906400.0 1924.7 2081.3 1417.8 1675.8 2092.3 1565.2 1393.1 1675.1 2483.7 2415.5 2609.1 True False 2249.5423056028776 2187.2292800489367 1618.865359298822 2086.3710752295196 1784.5254416530502 1730.828425104328 1646.2082374215188 1912.5505547785995 1921.145915653897 1869.8368723623917 1961.188462503271 1.1470301547315602 1.115257060638194 0.825451194645768 1.0638299761189014 0.9099204261967118 0.8825405911755618 0.8393931888219912 0.9751997787797558 0.979582509475778 0.9534202898459448 1.0 10.937512464177093 -5.607315708750058 9.565543966050097 0.9632502933582561 1.1390836427362416 0.5010827710898373 0.07117963358730055 0.1841842635166943 18.866423616915483 0.009850170680960835 0.03828484389595231 2.4699279873233373e-06 5.607315708750058 0.17583334937798556 RT(ph)SPGGFK ddPTM_A549_PD325901_60min_R1 1 RTSPGGFK 8 1 Q5MIZ7-5;Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7 Q5MIZ7-5 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B 1 RT(0.5)S(0.5)PGGFK 60.518 0.0069567 10957000.0 3194.3 2841.2 3220.9 2606.9 3135.5 2618.9 2764.8 3230.7 2983.6 3734.1 3529.2 True False 3518.582984480625 3080.637895192269 3439.489642845123 2767.922292300535 2915.2732968877744 2597.5725466935273 2870.0159769566126 3166.2611540648786 2858.209667748488 3498.3282887345094 3095.130773442063 1.1368123811349158 0.9953175231320915 1.1112582616404612 0.8942828251558357 0.9418901850294775 0.8392448451555389 0.9272680823643834 1.0229813813468411 0.923453604052375 1.1302683294522171 1.0 11.595784651197132 -6.256371928060647 24.832392629504138 0.9505455592008506 1.0725482050696307 0.3124751813763377 0.07890729730852974 272.1263434459178 1333513.443826526 0.008325483924507892 0.021295717350178593 5.541509370384561e-07 6.256371928060647 0.12200264586878007 RT(ph)SPQVLGSILK ddPTM_A549_MK2206_60min_R1 4 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.5)S(0.5)PQVLGSILK;RT(0.5)S(0.5)PQVLGSILK;RT(0.5)S(0.5)PQVLGSILK;RT(0.5)S(0.5)PQVLGSILK 106.36 9.1318e-05 354140500.0 5348.58 5179.63 4965.09 5016.74 7674.17 5187.75 5221.58 5383.63 8616.130000000001 7750.56 8351.55 True False 6251.2895437738025 5443.251043011518 5669.214421498797 6245.841525210018 6545.309758911527 5736.714261650251 6170.273496773713 6146.776039175402 6664.590312132305 5999.703113002303 6277.629643945877 0.9958041328230509 0.8670869980775258 0.9030820139200416 0.9949362863789654 1.0426403165124274 0.9138344545672134 0.9828986172709794 0.9791555711005235 1.0616412069736563 0.9557274725163811 1.0 12.616004202622657 -7.117078381772636 0.5548657109009596 1.0264324020253908 0.9194293617189896 0.07861497662320394 0.05373708797107372 0.885261296709044 0.48593042423871924 0.011748156365818373 0.042618382591740826 7.636979383994143e-08 7.117078381772636 -0.10700304030640118 RT(ph)SPQVLGSILK ddPTM_A549_PD325901_60min_R1 5 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.5)S(0.5)PQVLGSILK;RT(0.5)S(0.5)PQVLGSILK;RT(0.837)S(0.163)PQVLGSILK;RT(0.5)S(0.5)PQVLGSILK;RT(0.5)S(0.5)PQVLGSILK 117.08 1.6348e-05 596715100.0 17040.9 17507.3 18219.1 18768.4 17902.4 17648.800000000003 18838.600000000002 18672.4 19103.5 19761.800000000003 20633.199999999997 True False 18770.879623152454 18982.701612874705 19455.557686348406 19927.681441870962 16644.997183927186 17505.074024240996 19555.513231877463 18299.964333785567 18300.64632921076 18514.036575430106 18095.447204631302 1.0373260970498857 1.0490319138405335 1.0751631317168553 1.101253879858284 0.9198444777682592 0.9673744907371392 1.0806869269786532 1.0113021317926822 1.0113398205780146 1.0231323031735668 1.0 14.143339141967356 -6.724946002608602 24.999215120146875 1.0038672953339638 1.0651799883924575 0.37450430276382163 0.039574619300147856 148.95125854871594 102036.00790958082 0.005541538878199985 0.01153541159302938 1.8838833049006776e-07 6.724946002608602 0.06131269305849374 RT(ph)SPSSLPGR ddPTM_A549_MK2206_60min_R1 2 RTSPSSLPGR 10 1 Q5SNT2;H0Y4R5 Q5SNT2 TMEM201 Transmembrane protein 201 1 RT(0.743)S(0.256)PS(0.001)SLPGR;RT(0.499)S(0.499)PS(0.002)SLPGR 75.566 0.004461 92064000.0 2901.1 3462.9 2680.91 2285.96 3051.1 2588.0 2592.19 2508.86 3888.1 4776.6 4030.1000000000004 True False 3390.734754914797 3639.1468187582104 3061.1033505415485 2846.0203026206436 2602.28723176773 2861.860442224636 3063.1573691491553 2864.498588061513 3007.451558019856 3697.562742507226 3029.314944898405 1.1193074396655422 1.2013101592116753 1.0104935954898573 0.9394930386533618 0.8590348904296591 0.9447219897172543 1.0111716427199964 0.9455928618071042 0.9927827290076363 1.2205937017985538 1.0 11.564775861416317 -5.853337097100621 5.296285772104453 0.9773712154554832 1.1592981602832488 0.35646452555168495 0.08647543468225374 0.0830330511711865 3.70093996288216 0.006893650152894501 0.022581909831521335 1.4017252703900278e-06 5.853337097100621 0.1819269448277656 RT(ph)SPSSLPGR ddPTM_A549_PD325901_60min_R1 2 RTSPSSLPGR 10 1 Q5SNT2;H0Y4R5 Q5SNT2 TMEM201 Transmembrane protein 201 1 RT(0.5)S(0.5)PSSLPGR;RT(0.498)S(0.498)PS(0.003)SLPGR 73.92699999999999 0.0010197000000000001 216848000.0 2742.3 2443.7 2366.5 2453.9 2451.3 2188.96 2507.7 2659.6 2604.9 2643.7 2790.8999999999996 True False 3020.6962772254396 2649.6391751658953 2527.104920920544 2605.4718297887466 2279.129144525914 2171.1338355073754 2603.131895766092 2606.552191584162 2495.425111783763 2476.7763308233352 2447.6369929727575 1.234127562991552 1.0825294693506808 1.0324672033377258 1.0644845772756082 0.9311548857405592 0.8870326121646178 1.0635285801120693 1.0649259669908793 1.0195241855504744 1.0119050896575912 1.0 11.257173893643847 -4.957554055702077 1.1641447544885661 1.0061120313275198 1.4900035487074186 0.6216962207266261 0.05217937363978249 1.4398644002724303 0.9977905955934084 0.007789301138401661 0.999774278045282 1.1026709782176733e-05 4.957554055702077 0.4838915173798988 RT(ph)SQEGPGDSVK ddPTM_A549_MK2206_60min_R1 2 RTSQEGPGDSVK 12 1 Q9NSK0;Q9NSK0-3;Q9NSK0-5 Q9NSK0 KLC4 Kinesin light chain 4 1 RT(0.5)S(0.5)QEGPGDSVK;RT(0.5)S(0.5)QEGPGDSVK 86.455 0.00019153 21569600.0 4333.2 4125.700000000001 4301.700000000001 5689.700000000001 4889.4 4147.1 3993.2 4083.8 5352.0 5926.700000000001 5102.700000000001 True False 5064.538223431391 4335.680507710516 4911.745744178127 7083.676755420339 4170.175736949014 4585.943369377813 4718.712751181978 4662.691156112976 4139.780545387792 4587.854353728087 3835.5587626443744 1.3204173203540528 1.1303908442068398 1.2805815392570834 1.8468434962880331 1.0872407372723818 1.1956389285549873 1.2302543236043983 1.215648473834969 1.0793161574543773 1.196137156966682 1.0 11.905221048928837 -8.39082997967593 0.6655488170645941 1.0161709388896254 1.3386225373146696 0.179648882140644 0.19299087845322438 0.5649039073689496 0.5201954331781491 0.04776309431869971 0.06065157006844669 4.066024772956784e-09 8.39082997967593 0.32245159842504423 RT(ph)SSEDNLYLAVLR ddPTM_A549_MK2206_60min_R1 3 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.333)S(0.333)S(0.333)EDNLYLAVLR;RT(0.333)S(0.333)S(0.333)EDNLYLAVLR;RT(0.333)S(0.333)S(0.333)EDNLYLAVLR 159.34 2.6118e-19 126714600.0 1052.36 718.76 1097.3899999999999 830.5 1304.9499999999998 911.28 1007.6500000000001 920.1000000000001 1311.13 1431.68 1607.72 True False 1229.972640268221 755.3418139278207 1253.016403329761 1033.9725372825621 1112.9935836568118 1007.7110447412923 1190.726961767133 1050.5269926880728 1014.1611484443756 1108.2624936550571 1208.4787531852967 1.017785903993985 0.625035245292396 1.0368543096244534 0.8555984410625568 0.9209872997131261 0.8338674073376774 0.9853106301030334 0.8692970314282348 0.8392047818559155 0.9170723860340196 1.0 10.23897639331075 -10.913881427692324 1.1250439232263652 1.0011015844759035 0.880980726679439 0.039275848231058674 0.1094668964806234 0.7382581348991362 1.6348125481072824 0.07021516469474685 0.01603039492004364 1.2193224563493549e-11 10.913881427692324 -0.12012085779646442 RT(ph)SSEDNLYLAVLR ddPTM_A549_PD325901_60min_R1 4 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.333)S(0.333)S(0.333)EDNLYLAVLR;RT(0.381)S(0.381)S(0.239)EDNLYLAVLR;RT(0.333)S(0.333)S(0.333)EDNLYLAVLR;RT(0.333)S(0.333)S(0.333)EDNLYLAVLR 164.68 8.924799999999999e-20 384564700.0 1794.35 1923.44 2269.77 1723.09 1957.6899999999998 2044.49 1795.9199999999998 2221.33 2330.59 2243.95 2233.98 True False 1976.5110910693468 2085.535039113266 2423.8102414358023 1829.5213558786795 1820.1886080638576 2027.8403512884995 1864.2647183651322 2177.0238305503262 2232.643407145041 2102.2666140450965 1959.214622366004 1.008828266442017 1.0644750275468615 1.2371336012737284 0.9338034409263937 0.9290399261443575 1.0350271624859664 0.9515367520653722 1.1111716938501048 1.1395604042852825 1.0730149673476501 1.0 10.936059731100155 -13.29465311871302 15.400031776817142 0.49351006914866513 1.0527547428508905 0.0 0.09056282767123526 0.0 0.0 0.0 0.012452866572239407 5.0739581552200456e-14 13.29465311871302 0.5592446737022254 RT(ph)SSIADEGTYTLDSILR ddPTM_A549_MK2206_60min_R1 1 RTSSIADEGTYTLDSILR 18 1 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 RT(0.333)S(0.333)S(0.333)IADEGTYTLDSILR 111.13 1.2705e-09 3937000.0 230.78 366.58 310.45 263.46 365.22 331.89 240.93 179.18 623.52 362.21 530.12 True False 269.73002197071366 385.2373562102237 354.4764782016642 328.00771182716875 311.49662180400844 367.01037950924825 284.70386235156604 204.5793137157362 482.29371555683804 280.38650943422977 398.4765734323076 0.6769030852864801 0.9667754189209998 0.8895792170374149 0.8231543174592422 0.7817187824140053 0.9210337670492824 0.7144808034742122 0.5134036160609821 1.2103439642701332 0.7036461567090374 1.0 8.638351099971663 -8.784412046972092 24.99982061521647 1.0993291064386688 0.7985962235241408 0.06849608021008247 0.17436022865838002 138.78498336678928 151030.9517301689 0.024029180716550556 0.02558908061959363 1.642812327241078e-09 8.784412046972092 -0.30073288291452793 RT(ph)SSLDTLAAPYLAGHWPR ddPTM_A549_MK2206_60min_R1 3 RTSSLDTLAAPYLAGHWPR 19 1 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 RT(0.329)S(0.329)S(0.329)LDT(0.014)LAAPYLAGHWPR;RT(0.312)S(0.312)S(0.312)LDT(0.063)LAAPYLAGHWPR;RT(0.308)S(0.308)S(0.308)LDT(0.075)LAAPYLAGHWPR 65.833 0.00086692 4857800.0 1416.29 1547.71 1630.6299999999999 1375.539 2678.6 2107.2 1882.53 1515.89 2721.86 2900.7500000000005 2412.89 True False 1655.325127033979 1626.4818281960977 1861.877853599547 1712.5461167502926 2284.5814883199623 2330.182505353846 2224.561333136983 1730.7720497184241 2105.363055917268 2245.468560341631 1813.702820623783 0.9126771531758805 0.8967741626143059 1.0265617015246165 0.9442264175127104 1.259622834756485 1.2847653313746465 1.226530227466865 0.9542754358859977 1.1608092748034515 1.23805759951862 1.0 10.824722370994147 -6.700142400010031 24.996419936130426 1.1064562995366085 0.9474316355647957 0.42080272874246216 0.11056996440758944 70.49653480996065 28747.21849671743 0.016901156251968096 0.03518255779459807 1.9946081993631704e-07 6.700142400010031 -0.1590246639718128 RT(ph)SSPHKEESPK ddPTM_A549_MK2206_60min_R1 2 RTSSPHKEESPK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 RT(0.333)S(0.333)S(0.333)PHKEESPK;RT(0.333)S(0.333)S(0.333)PHKEESPK 46.408 0.013153 6886600.0 1190.29 1245.0700000000002 1207.53 785.77 1089.72 1195.87 978.39 1002.5799999999999 1293.74 1875.62 2237.3 True False 1391.181852203486 1308.4387448760524 1378.7759114925284 978.2836852745558 929.4236315433549 1322.4161696457388 1156.1507985147075 1144.6987852724785 1000.7099556782512 1451.916139325336 1681.7166636612494 0.8272391433493661 0.778037569079837 0.819862192773192 0.5817173049500167 0.5526636273674755 0.7863489719883724 0.6874825132538454 0.6806727970336963 0.595052649058977 0.8633536021248568 1.0 10.715718944854679 -10.883962571579891 1.1004968704396982 1.002237333126482 0.6927171343858526 0.42741349801329576 0.09885592814670233 0.2966694771950719 0.6304208566542834 0.07110857844846534 0.016594501440084335 1.3062834615617709e-11 10.883962571579891 -0.3095201987406294 RT(ph)SSPHKEESPK ddPTM_A549_PD325901_60min_R1 2 RTSSPHKEESPK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 RT(0.333)S(0.333)S(0.333)PHKEESPK;RT(0.333)S(0.333)S(0.333)PHKEESPK 56.648 0.0054967 10447400.0 1285.95 1283.19 1373.62 1456.48 1500.05 1389.97 1362.31 1510.77 1678.8600000000001 1764.3000000000002 2120.3999999999996 True False 1416.498697333645 1391.3289246556967 1466.8421134480784 1546.443461693921 1394.691662891567 1378.650545163084 1414.1534525346356 1480.6365071738624 1608.3033525929159 1652.9017969026788 1859.6042423230626 0.7617205129431843 0.7481854972096724 0.7887926259060711 0.8315981575531719 0.7499938057515315 0.7413677135092144 0.7604593603034809 0.7962105449513363 0.8648632413226722 0.8888460024364291 1.0 10.860779906861685 -9.528219284703697 0.6196695211684139 0.990528002155651 0.765089028003655 0.7223833727668904 0.039971430264879655 0.1533647438926753 0.12950107473895076 0.014294610786835436 0.008069561685428361 2.9633347597212315e-10 9.528219284703697 -0.22543897415199599 RT(ph)SSPPRK ddPTM_A549_PD325901_60min_R1 1 RTSSPPRK 8 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.797)S(0.101)S(0.101)PPRK 50.353 0.010872 30988000.0 1821.2 1805.9 1163.3 1229.8 1321.2 857.99 796.26 956.14 1126.7 1746.3 2157.5 True False 2006.086883303421 1958.0895308066006 1242.2485334911757 1305.7619529215542 1228.4034698925625 851.0028139056781 826.5621100301909 937.0690376226804 1079.348717204793 1636.0383199745781 1892.1411775193396 1.0602205095147645 1.0348538227859516 0.6565305740662571 0.6900975299493518 0.6492134331662506 0.4497565107807501 0.43683955502402916 0.4952426641077646 0.5704377295038076 0.8646491812621927 1.0 10.885804020542592 -5.755205971334372 23.683020090536758 0.7020344895622715 1.047537582352425 0.428221958650037 0.1691166891024456 77.99513700353106 296313.78180047206 0.03103781198695471 0.11410919713513876 1.7570900873091675e-06 5.755205971334372 0.34550309279015334 RT(ph)SSTLDSEGTFNSYR ddPTM_A549_MK2206_60min_R1 3 RTSSTLDSEGTFNSYR 16 1 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 RT(0.476)S(0.476)S(0.046)T(0.002)LDSEGTFNSYR;RT(0.479)S(0.479)S(0.038)T(0.003)LDSEGTFNSYR;RT(0.759)S(0.236)S(0.002)T(0.003)LDSEGTFNSYR 141.55 9.977100000000001e-14 49425600.0 5380.9 5181.9 4370.8 4270.1 6519.1 4363.9 4646.299999999999 4630.5 7096.3 6331.8 6215.0 True False 6289.064369625673 5445.636576315563 4990.645163227037 5316.274691692077 5560.149025799554 4825.685001477621 5490.472567318643 5286.88755531151 5488.999380462517 4901.441982373916 4671.643974726084 1.3462208172647456 1.1656788500529647 1.0682845675369896 1.1379879803455677 1.190191088165182 1.032973622901255 1.1752763260690409 1.1316974461054687 1.1749609795092226 1.0491899658644912 1.0 12.189714615500593 -14.999999803468997 0.25269463897742367 8.22590936244312e-11 1.1701426946222229 0.3172958279437358 0.0756765707453167 34.39741927458381 0.4436944090866271 17.247228035716645 0.03680642261190236 1.0000004525294602e-15 14.999999803468997 1.1701426945399638 RT(ph)SSTLDSEGTFNSYR ddPTM_A549_PD325901_60min_R1 1 RTSSTLDSEGTFNSYR 16 1 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 RT(0.486)S(0.486)S(0.026)T(0.001)LDSEGTFNSYR 148.2 9.332999999999999e-15 38670000.0 2457.6 2339.3 2081.6 2530.7 2335.8 2016.0 2422.4 2578.1 2364.9 3395.2 2397.4 True False 2707.093742810503 2536.4410207740643 2222.8698936776686 2687.015591363293 2171.7414660725444 1999.5823644026689 2514.585757588142 2526.6777730196764 2265.5114771612816 3180.826492571542 2102.534998370736 1.2875380171594015 1.2063727941459068 1.0572332424431368 1.2779885202602923 1.032915726851366 0.951034045070429 1.195978073866407 1.201729233985456 1.0775142762982954 1.512853053593105 1.0 11.037914100151143 -2.000000000000001 0.10993417140279006 0.9528542552214618 1.7788687331547306 0.0 0.1768267020644652 83.77663483068604 0.6215777781258642 0.4494479347919286 10.555064682181426 0.00999999999999998 2.000000000000001 0.8260144779332688 RT(ph)STPVIMEGVQEETDTR ddPTM_A549_MK2206_60min_R1 4 RTSTPVIMEGVQEETDTR 18 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RT(0.333)S(0.333)T(0.333)PVIMEGVQEETDTR;RT(0.442)S(0.442)T(0.117)PVIMEGVQEETDTR;RT(0.333)S(0.333)T(0.333)PVIMEGVQEETDTR;RT(0.458)S(0.458)T(0.084)PVIMEGVQEETDTR 124.0 9.056299999999998e-11 13099900.0 4116.8099999999995 4493.2300000000005 3650.25 4361.32 5706.92 4433.9400000000005 3665.35 4795.44 6800.5 5847.85 5922.610000000001 True False 4811.626881658954 4721.916214862963 4167.910338397891 5429.8435957870915 4867.439627911211 4903.136587788831 4331.296649941111 5475.208305419074 5260.19760816698 4526.816623491786 4451.862481279559 1.0808121099634667 1.0606608435725502 0.936217225020829 1.2196790935524227 1.093349052981575 1.1013674857224176 0.9729178895697168 1.22986914542908 1.1815723487161913 1.0168365807630886 1.0 12.120193312957358 -6.246510203925675 24.987596484267655 1.098524179318199 1.029373158362236 0.13035458688747248 0.08703271053191791 1598.17482385998 2674929.714212286 0.013129819431368178 0.03458659356344424 5.668782523313775e-07 6.246510203925675 -0.06915102095596293 RT(ph)STPVIMEGVQEETDTR ddPTM_A549_PD325901_60min_R1 2 RTSTPVIMEGVQEETDTR 18 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RT(0.452)S(0.452)T(0.096)PVIMEGVQEETDTR;RT(0.381)S(0.31)T(0.31)PVIMEGVQEETDTR 81.312 0.00014826 9773300.0 2285.2 3670.0 2975.3 2850.1 3396.2 3729.5 3349.4 3629.1 4108.5 3326.8 3942.6 True False 2517.1918217246753 3979.28377986612 3177.2217499323456 3026.14420395326 3157.6626282539505 3699.128188511784 3476.8632498620073 3556.7147535261233 3935.834032693609 3116.745280244759 3457.6851942005774 0.7279991324677706 1.1508519591489696 0.9188869348954495 0.8751936726422862 0.9132302251084508 1.0698279284407293 1.0055465013684868 1.0286404209069246 1.1382858217674094 0.9013964849872216 1.0 11.755590809096303 -7.262498874334484 24.89063003493226 1.0590703403197264 0.9279676826371724 0.14953352041368706 0.1092459784556169 88.36766167888369 2076021.2135222256 0.014557598027648395 0.0240820886033913 5.463879660851919e-08 7.262498874334484 -0.1311026576825539 RT(ph)SYEWYIPK ddPTM_A549_MK2206_60min_R1 2 RTSYEWYIPK 10 1 Q7Z392-4;Q7Z392-3;Q7Z392 Q7Z392-4 TRAPPC11 Trafficking protein particle complex subunit 11 1 RT(0.484)S(0.484)Y(0.032)EWYIPK;RT(0.494)S(0.494)Y(0.011)EWY(0.001)IPK 63.727 0.0039517 3465100.0 1323.25 1721.0 1440.0 1034.54 1713.58 1362.23 1254.6100000000001 1568.67 2335.9 1852.85 2211.9 True False 1546.5822496435862 1808.591549014664 1644.2136531177198 1288.0023464422654 1461.5146519657 1506.3802744249087 1482.556397065116 1791.033776350395 1806.8223796657962 1434.289898139788 1662.6241846655867 0.9302055533100881 1.0877933604571237 0.9889268232005359 0.7746803867774418 0.8790408953780875 0.9060257202549329 0.8916966388067495 1.0772330830196821 1.086729277927118 0.862666326743151 1.0 10.699246387026351 -8.261271265796372 24.998217540330344 1.0448206568656961 0.9235221267583178 0.11359749184302004 0.09281207986191181 13.828209101088223 2056239.9641842602 0.013486221938537508 0.01686058186855932 5.479346111621695e-09 8.261271265796372 -0.12129853010737834 RT(ph)SYEWYIPK ddPTM_A549_PD325901_60min_R1 1 RTSYEWYIPK 10 1 Q7Z392-4;Q7Z392-3;Q7Z392 Q7Z392-4 TRAPPC11 Trafficking protein particle complex subunit 11 1 RT(0.489)S(0.489)Y(0.02)EWY(0.002)IPK 48.625 0.019014 2394300.0 1101.5 825.85 1085.2 1313.0 1195.2 1206.3 1078.5 1260.0 1414.6 1177.6 1269.6 True False 1213.3234691185578 895.4472778208273 1158.848197837725 1394.101027960644 1111.253275216159 1196.4762927474908 1119.5429076778444 1234.8683115491224 1355.1492814040112 1103.2461350295266 1113.4472486574982 1.0897000020265728 0.8042116758566541 1.0407751235947347 1.2520584425005628 0.9980295667855081 1.0745693558362124 1.0054745826779812 1.1090496770619565 1.2170754232299168 0.990838260510077 1.0 10.120817494424093 -5.990325231399308 24.745107457241748 1.0983596444136017 0.9408401702796411 0.18106408884869118 0.1040772585039996 188.69128746455243 482605.16602927627 0.014659699955726071 0.04549764265554969 1.022526962681813e-06 5.990325231399308 -0.1575194741339606 RT(ph)T(ph)INTEDVK ddPTM_A549_MK2206_60min_R1 1 RTTINTEDVK 10 1 A0A087WT10;Q8N2Z9;Q8N2Z9-2 A0A087WT10 APITD1-CORT;APITD1 Centromere protein S 2 RT(0.667)T(0.667)INT(0.667)EDVK 40.431999999999995 0.054787 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RT(ph)TLCGTLDYLPPEMIEGR ddPTM_A549_MK2206_60min_R1 1 RTTLCGTLDYLPPEMIEGR 19 1 A3KFJ0;O14965 A3KFJ0 AURKA Aurora kinase A 1 RT(0.436)T(0.436)LCGT(0.121)LDY(0.006)LPPEMIEGR 41.49100000000001 0.052726 1497400.0 282.01 312.59 238.86 249.77 702.63 223.24 367.1 354.33 473.86 337.53 371.73 True False 329.6063935174666 328.49949582015904 272.733939710902 310.96366121260144 599.2740577683331 246.8631086252812 433.79731818063294 404.557362590115 366.53146659892724 261.2817385752341 279.4191817739221 1.1796126215277194 1.1756511980839877 0.9760745056206301 1.1128930348962296 2.1447133799611704 0.8834866205607101 1.552496558849772 1.447851074581709 1.3117620067168032 0.9350887684820328 1.0 8.126287253114146 -10.490251484522869 0.9155722384311941 1.0084124070527725 1.310340617437927 0.1374850372992953 0.3235650123258122 0.9629091700844213 1.5043699911742818 0.17909078623736957 0.0574865270389823 3.234063295686624e-11 10.490251484522869 0.3019282103851546 RT(ph)TLCGTLDYLPPEMIEGR ddPTM_A549_PD325901_60min_R1 2 RTTLCGTLDYLPPEMIEGR 19 1 A3KFJ0;O14965 A3KFJ0 AURKA Aurora kinase A 1 RT(0.452)T(0.452)LCGT(0.097)LDYLPPEMIEGR;RT(0.443)T(0.443)LCGT(0.104)LDY(0.01)LPPEMIEGR 74.062 0.00031318 5506000.0 1371.88 1745.99 1688.6599999999999 1754.81 2214.85 1575.2800000000002 2086.7799999999997 2267.49 1933.08 1701.77 2098.12 True False 1511.1522476753223 1893.1307048524386 1803.262622337497 1863.2006282373322 2059.2865768176957 1562.4514419624202 2166.1935548298325 2222.2631331385064 1851.8393700667802 1594.3199517741143 1840.0645410785057 0.821249588772359 1.02883929481236 0.9799996587514055 1.0125735193751768 1.1191382317550116 0.8491286077642853 1.1772378122998743 1.2077093403669334 1.0063991391200728 0.8664478425521125 1.0 10.845540654999203 -5.260703417696341 23.614143800073606 1.0247633009202461 0.8212494678296184 0.2319546956659757 0.10645320785050692 28.175982331357925 903639.5050201102 0.012564718358807929 0.10418016776288518 5.4865151442155595e-06 5.260703417696341 -0.20351383309062776 RT(ph)TSPSSDTDLLDR ddPTM_A549_MK2206_60min_R1 1 RTTSPSSDTDLLDR 14 1 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7ENU0;K7ERZ4;K7EJ43 Q96QT6 PHF12 PHD finger protein 12 1 RT(0.323)T(0.323)S(0.323)PS(0.014)S(0.017)DTDLLDR 41.202 0.059657 1635300.0 0.0 114.08 162.95 163.39 0.0 0.0 0.0 138.13 258.4 201.63 243.7 True False 0.0 119.88618472492318 186.05876026078653 203.42055733485577 0.0 0.0 0.0 157.7103505053836 199.87281258000849 156.08164296188332 183.18256422216356 0.0 0.6544628591372124 1.0157012543788542 1.1104799094751594 0.0 0.0 0.0 0.860946297891718 1.0911126472583002 0.8520551266690847 1.0 7.517138380396724 -8.476168086671873 8.060268015135295 1.039757384638998 0.42722296441505575 0.32158957114045683 0.38546293496773154 0.28051747497075674 44.667281723454856 0.06745936695456681 0.08120944414139428 3.3406572025529373e-09 8.476168086671873 -0.6125344202239422 RT(ph)TTPPDSGVLFEGLGISTRPR ddPTM_A549_MK2206_60min_R1 2 RTTTPPDSGVLFEGLGISTRPR 22 2 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 RT(0.333)T(0.333)T(0.333)PPDS(0.001)GVLFEGLGISTRPR;RT(0.333)T(0.333)T(0.333)PPDSGVLFEGLGISTRPR 77.19 5.4976000000000004e-05 8499200.0 491.47 457.31 150.66 332.58000000000004 531.5799999999999 129.24 444.14 385.94 658.55 546.83 855.53 True False 574.4181207121351 480.5851256710609 172.0258534574416 414.0621149300835 453.3852861797676 142.91609101743117 524.8344889587202 440.6481768916797 509.38947648825285 423.3007232100713 643.0782895731949 0.8932320217082295 0.7473197796648069 0.26750374914944425 0.6438751263161018 0.705023468418869 0.22223746833730504 0.8161284519604105 0.6852170008478032 0.7921111391061421 0.6582413526835311 1.0 9.328850574456208 -9.181302053002245 0.7049237616277373 0.9650109855510054 0.5922732392639994 0.09003692630853688 0.21627087912132034 0.46105304446156636 0.5005251672681247 0.06277886395999445 0.048535426388679616 6.587155973860513e-10 9.181302053002245 -0.37273774628700596 RT(ph)TTPPDSGVLFEGLGISTRPR ddPTM_A549_PD325901_60min_R1 2 RTTTPPDSGVLFEGLGISTRPR 22 2 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 RT(0.333)T(0.333)T(0.333)PPDSGVLFEGLGISTRPR;RT(0.333)T(0.333)T(0.333)PPDSGVLFEGLGISTRPR 86.006 5.2459e-06 13310200.0 686.85 750.95 767.54 572.28 702.6800000000001 733.71 640.55 593.89 776.97 616.76 686.3299999999999 True False 756.5785063677542 814.2351919592546 819.6298799929666 607.6284358578203 653.3261809144003 727.734909020775 664.9264807724094 582.0443980523078 744.3166528859566 577.8176683430796 601.9157610043327 1.256950815019958 1.3527394441385854 1.361701974085817 1.0094908211806177 1.0854113203885645 1.2090311571282093 1.1046836182906052 0.9669864717965378 1.2365794370362049 0.9599643434804831 1.0 9.233417783595025 -2.0000000000003135 0.2570710461658315 1.079715410747082 2.819619314145647 0.3978842206315516 0.11107250466349636 42.53849378299396 0.5203694164372423 0.053380581178732414 32.83358058047568 0.00999999999999278 2.0000000000003135 1.739903903398565 RT(ph)VSVPSEGQFPEYPPEGATK ddPTM_A549_MK2206_60min_R1 1 RTVSVPSEGQFPEYPPEGATK 21 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 RT(0.487)VS(0.41)VPS(0.103)EGQFPEYPPEGATK 52.707 0.0060571999999999996 13180000.0 3012.3 3803.6 3197.5 2643.0 4176.0 3893.5 3613.3 3539.9 4879.8 5374.0 5108.2 True False 3520.702596335818 3997.186993510852 3650.95358044716 3290.53511864878 3561.7159319137504 4305.507585703872 4269.789838687229 4041.691665489085 3774.533091439341 4160.009667594904 3839.692960852095 0.9169229498898559 1.0410173506747806 0.9508451893603883 0.8569787095472741 0.92760436009533 1.1213155920541116 1.1120133516456192 1.052608035771736 0.9830299271121163 1.0834224793515066 1.0 11.906775235825638 RT(ph)YSDEANQMR ddPTM_A549_MK2206_60min_R1 1 RTYSDEANQMR 11 1 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 RT(0.5)YS(0.5)DEANQMR 41.621 0.026947000000000002 35034000.0 518.63 502.57 331.18 295.27 700.41 657.3 508.95 423.21 546.19 967.17 654.54 True False 606.1620647138883 528.1486663499707 378.1463039163383 367.611163255174 597.3806168275162 726.8550497195722 601.419627044492 483.2013135262677 422.4788370862031 748.6856252712622 491.9996536149973 1.2320375842951834 1.0734736548478567 0.76859058972478 0.747177687126665 1.2141891004154695 1.4773487021361917 1.222398476554861 0.9821171823514848 0.8586974278986056 1.5217198218946886 1.0 8.942513489631716 -8.506448334946072 22.023627975900908 0.9325965874148134 1.096105138478685 0.0 0.26634170387840184 270.2120123947883 362197.45284020505 0.03646859385748597 0.04343260913313424 3.1156715241294742e-09 8.506448334946072 0.16350855106387163 RT(ph)YSFEQPWPNAR ddPTM_A549_MK2206_60min_R1 1 RTYSFEQPWPNAR 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RT(0.578)Y(0.009)S(0.413)FEQPWPNAR 51.771 0.01573 2033700.0 445.74 359.02 385.35 437.61 477.32 463.88 388.33 378.23 506.02 826.73 558.5 True False 520.9700147032925 377.2925845015944 439.9984244645236 544.8244696450591 407.10686030198065 512.9674737013769 458.88453437506155 431.8452607807951 391.4072779478941 639.9711188110783 419.80903618415385 1.2409690354420175 0.8987243055342211 1.0480918382888582 1.2977911923888792 0.9697429669508084 1.2219066992077752 1.0930792213194924 1.0286707134892672 0.9323460054733053 1.52443388219578 1.0 8.71358941004406 -8.435264851640925 3.1909719684815228 0.9682861543022779 1.1055533705418792 0.0 0.2012170415198297 0.26593797508287803 5.227725186622664 0.017850030746732377 0.02151309247276446 3.6705838408032537e-09 8.435264851640925 0.13726721623960125 RT(ph)YSFEQPWPNAR ddPTM_A549_PD325901_60min_R1 2 RTYSFEQPWPNAR 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 RT(0.499)Y(0.001)S(0.499)FEQPWPNAR;RT(0.5)YS(0.5)FEQPWPNAR 94.007 0.00010738 9071000.0 1573.3200000000002 1532.65 1420.1100000000001 1503.77 1481.8600000000001 1662.76 1418.63 1449.0900000000001 1950.26 1354.38 1794.9 True False 1733.0422881830318 1661.8117943356433 1516.48720441516 1596.6544575905396 1377.779265739473 1649.2190338463206 1472.6167409541235 1420.1867631608873 1868.297354411839 1268.864215660063 1574.1386788085572 1.100946385165217 1.0556959286417158 0.963375860609033 1.0143035547535266 0.8752591396726839 1.047696150312875 0.9355063570820367 0.9021992676247598 1.186869606574896 0.806068888810005 1.0 10.620346929965024 -8.756334227973285 24.999534843745213 1.0882439796354324 0.985892839469679 0.0 0.11368364657925592 145.2955517229113 711499.6286018052 0.015311463128682912 0.01710394118855084 1.752531255090978e-09 8.756334227973285 -0.10235114016575342 RT(ph)YSLTTPAR ddPTM_A549_MK2206_60min_R1 1 RTYSLTTPAR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RT(0.525)YS(0.459)LT(0.016)TPAR 88.596 0.00043739 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RT(ph)YSLTTPAR ddPTM_A549_PD325901_60min_R1 1 RTYSLTTPAR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RT(0.546)YS(0.454)LTTPAR 107.37 0.00016554 25048000.0 841.3 958.72 961.97 784.37 1190.7 1089.5 807.28 988.42 1407.7 1316.7 1275.4 True False 926.7081566676744 1039.514699028133 1027.2550689955362 832.8187534664816 1107.0693396920017 1080.627473222574 838.001482160566 968.7051876995101 1348.5392644086153 1233.5633372905727 1118.5338854267288 0.8285025324146783 0.9293546780941291 0.9183942322888421 0.7445628284642938 0.9897503813839726 0.9661106268678725 0.7491963301950949 0.8660490310760162 1.2056311230071834 1.102839487799656 1.0 10.127393247448568 -8.744737601109767 24.97377893562854 1.0971035832544658 0.8757709940773784 0.5799918332585767 0.08667930440316653 142.2486580999001 212700.9581819434 0.017145763042298232 0.019415522274353593 1.7999581137393334e-09 8.744737601109767 -0.22133258917708742 RTAADKDRGEEDADGSK ddPTM_A549_PD325901_60min_R1 2 RTAADKDRGEEDADGSK 17 3 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 73.464 0.00015873 8186600.0 1483.01 1320.5 1225.92 1411.49 1860.3799999999999 1492.79 1482.48 1480.1100000000001 1398.58 1686.37 1637.1100000000001 False True 1633.5640834657397 1431.7831692951538 1309.1183032558274 1498.6745315736255 1729.7133267625834 1480.6332131729462 1538.8965876441844 1450.5880449261683 1339.802546292961 1579.892310402295 1435.7558484953358 1.1377728916637921 0.9972330398623517 0.9117972980070227 1.0438226897311462 1.2047405751996856 1.0312569610805635 1.0718372411694783 1.0103305840240013 0.933168788897546 1.1003906493280269 1.0 10.487594723159864 -8.514559525841024 5.187329378012235 0.9684216641514 1.0527382016110354 0.0 0.08194820099114847 0.21594169941440922 17.676834655804658 0.01266666588017526 0.014853506878758102 3.058021075281266e-09 8.514559525841024 0.08431653745963541 RTADS(ph)SSSEDEEEYVVEK ddPTM_A549_PD325901_60min_R1 1 RTADSSSSEDEEEYVVEK 18 1 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 RT(0.09)ADS(0.35)S(0.222)S(0.092)S(0.246)EDEEEYVVEK 163.64 2.0466999999999998e-23 23542000.0 7383.3 6562.9 6267.1 6842.1 7430.7 5883.2 6197.4 6822.5 7707.7 7653.5 8259.2 True False 8132.847180701816 7115.97861549955 6692.423093133803 7264.720977463458 6908.7932665233575 5835.289169768743 6433.245448347403 6686.4198853522885 7383.772173248764 7170.256703845516 7243.370759382496 1.1227986873607376 0.9824125882665978 0.9239376687248768 1.0029475528438618 0.9538091443923739 0.8056040983695562 0.8881563103772204 0.9231088822412167 1.0193834360452148 0.9899060730196265 1.0 12.822445507682882 -8.768196295498193 24.877686801513168 1.0091532929626963 0.9455064048051471 0.08704943851490154 0.07419292261445457 231.61308330225626 852752.8054617643 0.013164943402187972 0.014171227131906506 1.7053114360358159e-09 8.768196295498193 -0.06364688815754915 RTADSSSS(ph)EDEEEYVVEK ddPTM_A549_MK2206_60min_R1 2 RTADSSSSEDEEEYVVEK 18 1 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 RTADS(0.003)S(0.024)S(0.106)S(0.867)EDEEEYVVEK;RT(0.007)ADS(0.017)S(0.01)S(0.182)S(0.785)EDEEEYVVEK 185.71 3.8901e-40 49096000.0 6854.1 5932.2 5852.9 6105.0 7742.4 5766.5 5117.6 6553.5 8843.6 8868.0 9713.6 True False 8010.904513343741 6234.123641525153 6682.9292293977105 7600.725274063862 6603.503216295264 6376.70720250709 6047.401676712635 7482.478694252021 6840.5387203272585 6864.712640906517 7301.445038278244 1.0971669952106897 0.8538205257784456 0.915288575667155 1.0409891787470322 0.9044104532289183 0.8733486548315897 0.8282472366783267 1.024794222927749 0.9368746439184766 0.940185484505857 1.0 12.833966302524138 -10.52862588543785 0.6715219198796952 1.0034125554540765 0.9358689726573249 0.0 0.0807553176434688 1.8190818438288407 1.353930392222832 0.06829143745475784 0.015656399497807033 2.960561686877048e-11 10.52862588543785 -0.06754358279675154 RTADSSSS(ph)EDEEEYVVEK ddPTM_A549_PD325901_60min_R1 1 RTADSSSSEDEEEYVVEK 18 1 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 RT(0.001)ADS(0.003)S(0.003)S(0.13)S(0.863)EDEEEYVVEK 214.31 5.7679e-56 30027000.0 9221.3 9078.0 8467.6 8186.5 9883.0 9360.8 8252.3 8800.8 9661.9 9469.7 12003.0 True False 10157.439587637726 9843.034919243773 9042.262255815254 8692.161512109533 9188.852174499083 9284.568748363352 8566.34579233183 8625.261139905959 9255.843943162321 8871.781525890885 10526.70709328604 0.9649208909893736 0.9350535577760766 0.8589829825874448 0.825724648276137 0.872908507196876 0.8820012437018478 0.8137725992010802 0.8193693491678107 0.8792724886461143 0.8427879152778297 1.0 13.361766590543033 -10.373616747199337 0.8602669338282523 0.9960430391341748 0.8705429559084725 0.0 0.06306960360623136 0.3665734198325914 0.5125584523970832 0.02664789685429862 0.00914605361217457 4.2304177218796845e-11 10.373616747199337 -0.12550008322570227 RTAFYNEDDS(ph)EEEQR ddPTM_A549_MK2206_60min_R1 2 RTAFYNEDDSEEEQR 15 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 RTAFYNEDDS(1)EEEQR;RTAFYNEDDS(1)EEEQR 171.35 1.2851e-27 47580000.0 3706.6000000000004 4154.4 3096.8 3630.5 4216.9 3878.4 4038.3 3817.7 4775.299999999999 5753.5 5665.0 True False 4332.183462330559 4365.841215122903 3535.9728062326117 4519.972662979339 3596.599596093653 4288.8097137264385 4772.006837398121 4358.870666215904 3693.7021745871293 4453.78035402071 4258.224153953864 1.017368580352451 1.0252727562660398 0.8303867242285439 1.0614689362424556 0.8446243001919295 1.0071827030862561 1.1206565612491766 1.0236357947875026 0.8674278387053528 1.0459243555521303 1.0 12.056036180268624 -8.73216560140392 24.986908577195443 0.9373964212011298 0.9893793579051464 0.0 0.0918589019450094 472.0296286748483 402905.18134507013 0.01544690991177861 0.017513805193106937 1.8528249855503969e-09 8.73216560140392 0.05198293670401666 RTAFYNEDDS(ph)EEEQR ddPTM_A549_PD325901_60min_R1 2 RTAFYNEDDSEEEQR 15 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 RTAFYNEDDS(1)EEEQR;RTAFYNEDDS(1)EEEQR 172.84 1.0847e-27 62408000.0 6583.0 6433.299999999999 6058.9 7820.200000000001 7769.7 7712.6 6560.200000000001 7110.299999999999 7580.1 6967.8 8763.0 True False 7251.301313851535 6975.456768668311 6470.0933891254945 8303.23599303719 7223.98307600987 7649.791142704382 6809.85200087918 6968.479488577557 7261.534757507812 6527.851918867816 7685.2065532338265 0.9435401981226244 0.9076472727636887 0.8418893291037143 1.0804180649566673 0.9399855457326804 0.9953917425271358 0.8860987604833719 0.9067393882400362 0.9448717750406149 0.8494048759328384 1.0 12.90786832002661 -9.134887725672682 0.00843248157744869 1.919271288882156 3.6926014960338347e-06 0.0 0.07237725018765055 2715.8634824898104 14.240050799230985 1636.2850618527548 1603.5606772361725 7.330140083016546e-10 9.134887725672682 -1.9192675962806598 RTAQEVETYRR ddPTM_A549_MK2206_60min_R1 1 RTAQEVETYRR 11 2 P17844-2;P17844;J3KTA4;J3QRQ7;J3QR02;J3KRX8;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 34.79 0.053958000000000006 7749000.0 1440.4 1603.4 1022.9 1576.4 1770.4 1288.6 1160.2 1474.9 2272.4 1991.0 1851.9 False True 1683.5043056010734 1685.0062113248755 1167.962601232025 1962.6180707672854 1509.9765052346986 1424.9587966965466 1370.9933221279503 1683.9715916918135 1757.7050282771336 1541.2317171904456 1392.0221201601332 1.2093947942489658 1.210473732364999 0.83904025971776 1.4099043702994554 1.0847359990665926 1.023661029562249 0.9848933449205793 1.2097304829452677 1.2626990640600837 1.1071890991309448 1.0 10.442966421417529 -11.150663222971165 1.5513500044934674 1.000452983737464 1.150197988867599 0.02234204790872385 0.1493224584808143 0.6852247258018667 2.9714330531998305 0.10344727775556392 0.022363131012715844 7.068654861174084e-12 11.150663222971165 0.149745005130135 RTAQEVETYRR ddPTM_A549_PD325901_60min_R1 1 RTAQEVETYRR 11 2 P17844-2;P17844;J3KTA4;J3QRQ7;J3QR02;J3KRX8;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 38.584 0.0401 6089600.0 2599.6 2762.1 2614.5 2329.2 2497.3 2630.8 2578.4 2690.1 3200.8 2692.8 2598.0 False True 2863.509478275626 2994.8718605907948 2791.9356922656934 2473.0693940029964 2321.8982632172997 2609.375637038962 2676.522422954619 2636.4438451573756 3066.2815070818333 2522.7761484438756 2278.4624700789077 1.256772721025533 1.3144266802371674 1.2253595259653336 1.0854115117012875 1.0190636421309531 1.1452352941098012 1.1747055122053098 1.1571153265763778 1.345767835700029 1.1072274314689532 1.0 11.153844891924155 -11.112692981089742 1.4752814284761306 1.0005386989675444 1.2066365283702578 0.20085685407642562 0.09559536842251853 0.3859180063219983 1.5088923682138773 0.07702463410674418 0.016894089652305194 7.714486420569518e-12 11.112692981089742 0.20609782940271337 RTAS(ph)APAK ddPTM_A549_MK2206_60min_R1 1 RTASAPAK 8 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 RT(0.022)AS(0.978)APAK 69.65 0.0029142 12657000.0 2590.1 2508.4 1724.4 1581.3 1879.6 1979.7 1737.7 2091.3 2137.1 4134.3 3865.5 True False 3027.2455581347826 2636.06684575734 1968.9458496084708 1968.7185709872545 1603.1133298910636 2189.1905399814955 2053.4175968468694 2387.7481793376433 1653.0502622474303 3200.3587586039484 2905.589667627302 1.0418696045979625 0.90723988838725 0.6776407114691827 0.6775624902999141 0.5517342478713322 0.7534410534193507 0.7067128644230366 0.82177748838413 0.5689207532174726 1.1014489741138687 1.0 11.504615262141522 -11.042691136479805 1.3473731456967866 0.9997174799418042 0.7215913330169563 0.38981628524725553 0.14076479410299772 0.4123094405671879 1.336641921292535 0.10340942837382805 0.023228478680857197 9.06376973025539e-12 11.042691136479805 -0.27812614692484783 RTAS(ph)APAK ddPTM_A549_PD325901_60min_R1 2 RTASAPAK 8 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 RT(0.007)AS(0.993)APAK;RT(0.003)AS(0.997)APAK 77.744 0.0018445 43140000.0 8072.4 7574.3 5877.8 6445.700000000001 6633.4 5411.3 5364.9 5963.799999999999 6255.1 8660.4 9875.9 True False 8891.904105413203 8212.612843008163 6276.7028540827305 6843.8362497531825 6167.49286798768 5367.232166910799 5569.064205285926 5844.847330489403 5992.219899696194 8113.580866006885 8661.226908488181 1.0266333164299106 0.9482043282989887 0.7246898066983365 0.7901693746235977 0.7120807401943725 0.6196849734592221 0.6429879120044907 0.6748290273703986 0.6918442344263831 0.9367703850427251 1.0 13.080355689454365 RTAS(ph)FHEAR ddPTM_A549_MK2206_60min_R1 1 RTASFHEAR 9 1 Q9NS62-2;Q9NS62 Q9NS62-2 THSD1 Thrombospondin type-1 domain-containing protein 1 1 RT(0.205)AS(0.795)FHEAR 61.211999999999996 0.0032353 4945400.0 1429.6 1481.0 1380.8 946.08 972.93 753.35 693.27 588.83 1174.3 2374.2 2096.6 True False 1670.8815296357234 1556.376574137545 1576.6182029339914 1177.8696424711445 829.8132858325771 833.0689969667419 819.2281851677675 672.2984557162462 908.3229249717642 1837.8665710464873 1575.9563567837004 1.060233376668978 0.9875759359947538 1.0004199647708785 0.7473999120603864 0.5265458540527774 0.5286117178187063 0.519829233621478 0.42659712803742256 0.576362994483883 1.1661912864118318 1.0 10.622011867220621 -3.5730790738804394 8.381152097328489 0.7573993182213435 1.1031829909906476 0.0 0.25833304821682396 0.0 0.0 0.034935149437885026 0.0 0.0002672519767093877 3.5730790738804394 0.3457836727693041 RTAS(ph)NPKVENEDEPVR ddPTM_A549_PD325901_60min_R1 2 RTASNPKVENEDEPVR 16 2 Q9UBF8-2 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RT(0.413)AS(0.587)NPKVENEDEPVR;RT(0.099)AS(0.901)NPKVENEDEPVR 126.61 2.6684999999999996e-09 22549000.0 5323.1 5495.799999999999 5088.7 5769.8 5588.7 5437.700000000001 5676.8 5773.3 5776.2 5685.2 6765.6 True False 5863.497193340895 5958.950353511775 5434.049782838952 6126.187441833454 5196.168991968332 5393.417174063688 5892.833730464155 5658.147002433764 5533.446401276579 5326.2355017577 5933.474090672002 0.9882064206800671 1.0042936503051094 0.9158293606408101 1.032479007781363 0.8757380436087545 0.9089813306074201 0.9931506635763798 0.9535976589716506 0.9325812022969301 0.8976588454529633 1.0 12.53466134488049 -5.680293367708158 24.999999999971493 0.959825607130212 0.9962508177643323 0.08872480700616436 0.04706842703836549 56.84927567109534 17509.911144736037 0.006059656314790751 0.02346894611998817 2.087885279299021e-06 5.680293367708158 0.0364252106341203 RTAS(ph)PPALPK ddPTM_A549_MK2206_60min_R1 1 RTASPPALPK 10 1 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 RT(0.247)AS(0.753)PPALPK 92.85600000000001 0.00025568 6755200.0 1119.1 1004.1 940.64 1084.7 1501.0 1111.3 996.03 985.02 1563.2 1600.5 1581.5 True False 1307.9767206318809 1055.20440114214 1074.036896297675 1350.4515486940327 1280.2048883626774 1228.8970283787621 1176.9957581788497 1124.6496014972338 1209.1376959174506 1238.9459384044746 1188.7699028204831 1.1002774527926447 0.8876439407143091 0.9034859426953931 1.1360075196132933 1.0769156296144906 1.0337551661285107 0.9900955225955014 0.9460616380250567 1.0171335033370568 1.042208366366732 1.0 10.21525378007814 -4.930333251874338 20.068870336530974 1.0046142570402627 3.4930841915619157 0.13978076830407837 0.0690720336827357 476.0085794802505 153331.90590103887 0.009056628905011226 6221.243677467688 1.1739963539204535e-05 4.930333251874338 2.488469934521653 RTAS(ph)PPALPK ddPTM_A549_PD325901_60min_R1 1 RTASPPALPK 10 1 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 RT(0.053)AS(0.947)PPALPK 72.705 0.00083881 9822400.0 1562.1 1578.5 1499.6 1415.9 1971.7 1544.8 1319.0 1752.0 1969.3 1746.5 1967.1 True False 1720.6832420427595 1711.5257347462325 1601.3718738273599 1503.3569272577893 1833.2145939957352 1532.2196609768068 1369.195266784494 1717.0549855825889 1886.5371694252217 1636.2256919404444 1725.1591704742964 0.9974054982820476 0.9920972882030846 0.9282458692707736 0.8714308528670272 1.0626350457226108 0.8881613286474633 0.7936631530689787 0.9953023552664538 1.093543831614423 0.9484491170113877 1.0 10.752513761834097 -8.518666600978879 24.50567692749346 1.0441866216946933 0.9333018932185251 0.16183334262302929 0.07582140129265184 123.6345493531574 719291.244109665 0.012429162481347625 0.014267908470222775 3.029238019996359e-09 8.518666600978879 -0.11088472847616826 RTAS(ph)PPPPPK ddPTM_A549_MK2206_60min_R1 2 RTASPPPPPK 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.499)AS(0.501)PPPPPK;RT(0.184)AS(0.816)PPPPPK 81.565 0.00046387 46540000.0 6281.4 6872.2 5670.7 5933.3 7685.5 5456.6 5804.3 6575.1 8608.5 8618.7 9257.599999999999 True False 7341.546754514432 7221.96562646053 6474.8905296768435 7386.958766355954 6554.973130920285 6034.013790202062 6858.866177923852 7507.140560399249 6658.688494949699 6671.729684052884 6958.6824232379995 1.0550196586063312 1.0378352089101401 0.9304765091814552 1.0615456083593868 0.941984808651483 0.8671201562600306 0.985655869999065 1.078816376981038 0.9568892629319462 0.9587633517766441 1.0 12.764598452602982 -5.604959028200265 8.051668964772055 0.9792998315709123 1.0507551084584932 0.19219115344075133 0.05595777890314774 0.2718970292956519 22.823361346342114 0.007457812829463364 0.02916401980457138 2.4833673777437614e-06 5.604959028200265 0.07145527688758091 RTAS(ph)PPPPPK ddPTM_A549_PD325901_60min_R1 1 RTASPPPPPK 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.139)AS(0.861)PPPPPK 73.46600000000001 0.00070439 17945000.0 2985.6 3825.2 3101.9 3953.9 3880.2 4062.5 3428.5 3226.2 4151.1 3673.4 4240.4 True False 3288.6959141174448 4147.563028540565 3312.41358723999 4198.123423041579 3607.6681379633033 4029.4163469175814 3558.973443647188 3161.850910095062 3976.643702839101 3441.460897093634 3718.857682110318 0.8843295966763719 1.1152787718907737 0.8907072736809639 1.1288744506779016 0.9701011564164191 1.0835091555939922 0.95700716399225 0.8502210034294255 1.0693186033896567 0.9254080664739847 1.0 11.860643822813017 RTAS(ph)TDLK ddPTM_A549_MK2206_60min_R1 2 RTASTDLK 8 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 RT(0.015)AS(0.846)T(0.139)DLK;RT(0.048)AS(0.847)T(0.105)DLK 59.739 0.009560700000000002 23244000.0 10901.400000000001 11010.9 10324.2 8065.6 11889.9 10366.3 9146.400000000001 10627.8 13207.8 14805.8 16865.7 True False 12741.289806359026 11571.307778643548 11788.326803831933 10041.672362078549 10140.91146045529 11463.254985406968 10808.182487080743 12134.323196272475 10216.254388522586 11461.159496925315 12677.481220360054 1.0050332226796357 0.9127450143692589 0.9298634798921935 0.7920873387650228 0.799915321047289 0.9042218076408556 0.8525496744355484 0.9571556830062373 0.8058583728852436 0.9040565154629198 1.0 13.629980516835994 -11.041486758726395 1.3336887743513999 1.000134526345437 0.874196102409575 0.05229995751872096 0.07071501077278709 0.4292415399594503 1.3585977086741476 0.04855108041673627 0.010811919994628848 9.088940100573267e-12 11.041486758726395 -0.12593842393586208 RTAS(ph)TDLK ddPTM_A549_PD325901_60min_R1 1 RTASTDLK 8 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 RT(0.004)AS(0.935)T(0.062)DLK 77.67399999999999 0.0018499000000000002 79858000.0 7064.5 6454.4 6798.2 6965.6 8738.9 7586.0 7386.3 7461.0 8003.8 8653.9 7630.9 True False 7781.682839389971 6998.3349397187685 7259.566732897548 7395.849291974607 8125.109811568352 7524.222131130288 7667.389688438445 7312.184501958728 7667.428119964255 8107.4912771161835 6692.347676260636 1.1627732472706802 1.0457219615985498 1.0847563641454214 1.1051203030304986 1.2140896146788767 1.1243023368048422 1.1456950623824458 1.0926187424327642 1.1457008049899235 1.2114569758345641 1.0 12.70829668188947 -10.79204368232042 0.8724804380475873 0.9942368633299022 1.124240021986455 0.0 0.07532377068868644 0.42147316650251687 0.5272017309383045 0.03715907121753433 0.0078113833687365655 1.61419618916046e-11 10.79204368232042 0.13000315865655276 RTDALTS(ph)S(ph)PGR ddPTM_A549_PD325901_60min_R1 1 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 2 RTDALT(0.063)S(0.958)S(0.978)PGR 63.623999999999995 0.0016457999999999998 4994200.0 588.23 587.16 499.87 573.71 634.64 480.71 436.06 403.53 506.75 645.29 685.66 True False 647.9466765679615 636.6420338381993 533.7941841624983 609.1467637100541 590.0650757891431 476.7952571388923 452.65450192118794 395.48127758683916 485.4530597705941 604.5462792741195 601.3281667568533 1.0775259041373966 1.0587264476098042 0.8876919686656515 1.0130022130767113 0.9812696434486754 0.7929035816007005 0.7527578566001525 0.6576796156411409 0.8073013815214926 1.0053516743355337 1.0 9.232008727035964 -5.977460133575734 0.8784884312326604 0.871679821694441 1.0976584443479518 0.3287509773746391 0.10940809273952201 1.14812188765725 1.1799133414445198 0.020113364421813364 0.19579105225355975 1.053270368524317e-06 5.977460133575734 0.22597862265351076 RTDALTS(ph)SPGR ddPTM_A549_MK2206_60min_R1 1 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.011)S(0.779)S(0.21)PGR 124.42 2.0693000000000002e-06 211340000.0 1115.6 1424.2 1233.3 919.09 1792.7 1217.7 906.48 1633.4 1686.6 1471.2 1821.4 True False 1303.8860061986659 1496.6856967499614 1408.200484993114 1144.267091259518 1528.9962047753302 1346.556205756158 1071.1756823328244 1864.939452077706 1304.5877929467583 1138.854898207225 1369.0961119173114 0.9523699577034632 1.0931925696976605 1.028562182549069 0.835782879886396 1.1167924526745543 0.9835366516894216 0.7823962634973283 1.362168394055261 0.9528825489978098 0.8318297658535808 1.0 10.419008013448783 -6.0398809737584225 24.977523504626184 0.9914337097975805 1.0323057399693152 0.011705030048851928 0.15323041071220833 2233.763157385933 1399008.2438588955 0.018665436852986085 0.0493894482744067 9.12260826643003e-07 6.0398809737584225 0.040872030171734686 RTDALTS(ph)SPGR ddPTM_A549_PD325901_60min_R1 1 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.059)S(0.47)S(0.47)PGR 74.987 0.00056867 4297500.0 1289.6 1292.7 1631.8 1421.6 1657.3 1688.4 1802.7 1640.7 1534.3 1963.4 2237.7 True False 1420.5192426466574 1401.640365731044 1742.5437608105403 1509.40900331215 1540.896965374617 1674.6502301872356 1871.302734975291 1607.9749513957497 1469.8187066719743 1839.4305889240597 1962.4770859490284 0.7238399127395226 0.7142199905244901 0.8879307551088521 0.76913458715989 0.785179595933707 0.8533349215526747 0.9535411895371779 0.8193598605092267 0.7489609520516715 0.9373004159355751 1.0 10.938460093733513 -10.889266784530511 1.0098531420208243 1.0060796557206322 0.8056568100548257 0.43541426885016665 0.07029943040454038 0.39106660030485974 0.6718075656539485 0.05883334951449244 0.012466609813170588 1.290426328829483e-11 10.889266784530511 -0.20042284566580648 RTDALTSS(ph)PGR ddPTM_A549_MK2206_60min_R1 3 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALTS(0.015)S(0.985)PGR;RTDALTS(0.1)S(0.9)PGR;RTDALTS(0.17)S(0.83)PGR 155.09 1.6085999999999998e-13 263475000.0 3320.0699999999997 3812.37 3446.89 3132.94 4082.5 3855.96 3203.77 3728.0099999999998 4203.2 5078.8 5080.7 True False 3880.4166480817544 4006.403349051152 3935.7108324964856 3900.5104406430205 3481.9696580550476 4263.9951278209055 3785.8535387294073 4256.466834051797 3251.1819111311584 3931.49555262021 3819.0219698134856 1.0160760212309716 1.0490652792046697 1.0305546455624865 1.0213375234480557 0.9117438144052104 1.1165149510855397 0.9913149410120575 1.114543688854368 0.851312701741263 1.0294508865609426 1.0 11.898987504085671 -8.763869344078662 24.999660444642252 0.9297865585868801 1.0291327882392245 0.13691247680837204 0.06861796982971623 59.285903347737346 609935.444725317 0.012139749646051643 0.013220006645375922 1.7223866708378119e-09 8.763869344078662 0.09934622965234441 RTDALTSS(ph)PGR ddPTM_A549_PD325901_60min_R1 4 RTDALTSSPGR 11 1 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.001)S(0.027)S(0.973)PGR;RTDALTS(0.003)S(0.997)PGR;RTDALTS(0.005)S(0.995)PGR;RTDALTS(0.085)S(0.915)PGR 182.23 1.2385999999999999e-18 574765000.0 12629.0 12018.7 12083.0 12043.5 13983.099999999999 11085.4 10852.199999999999 12273.3 11105.6 13072.800000000001 12352.199999999999 True False 13911.086783021572 13031.55802863131 12903.025040981596 12787.399642226981 13000.975295076198 10995.124177752652 11265.1864095517 12028.499403282407 10638.870252764309 12247.38117698199 10832.957707047231 1.2841448438381613 1.2029547590824443 1.1910897642097975 1.18041628039481 1.200131639636938 1.0149697317289372 1.039899417517645 1.1103615216237235 0.9820836137709038 1.130566693620028 1.0 13.403139573254737 -7.09282155199692 0.5693575771161019 0.990535877953803 1.262504711678798 0.5994510933767563 0.06034297304365925 0.2767654131691867 0.15976996113003678 0.00938093908038804 0.034359474950870605 8.07566784585101e-08 7.09282155199692 0.2719688337249949 RTDEAAFQK ddPTM_A549_PD325901_60min_R1 1 RTDEAAFQK 9 1 P26447 P26447 S100A4 Protein S100-A4 0 103.26 5.597e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RTDEDAVLMDGMT(ph)ESDTASVNENGLGK ddPTM_A549_MK2206_60min_R1 1 RTDEDAVLMDGMTESDTASVNENGLGK 27 1 E7EU85;E9PFF5;P51114-2 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RTDEDAVLMDGMT(0.25)ES(0.25)DT(0.25)AS(0.25)VNENGLGK 46.306999999999995 0.0022275 2106200.0 617.02 675.92 551.71 576.46 636.65 509.25 524.42 770.69 940.38 613.6 844.97 True False 721.1578913093409 710.3214409122551 629.9507740010961 717.692725878273 542.9996283651551 563.1384969872087 619.7003257975691 879.9376676391383 727.385431478283 474.98733383629235 635.1406290143681 1.1354302627883486 1.1183687650631877 0.9918288095955603 1.1299745175993732 0.8549281900101393 0.8866359216558156 0.9756899456412358 1.385421790768848 1.145235241220615 0.7478459291344551 1.0 9.31093224987876 RTDEDAVLMDGMTESDTAS(ph)VNENGLGK ddPTM_A549_MK2206_60min_R1 3 RTDEDAVLMDGMTESDTASVNENGLGK 27 1 E7EU85;E9PFF5;P51114-2 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RTDEDAVLMDGMT(0.212)ES(0.212)DT(0.212)AS(0.365)VNENGLGK;RTDEDAVLMDGMT(0.237)ES(0.237)DT(0.237)AS(0.288)VNENGLGK;RT(0.002)DEDAVLMDGMT(0.239)ES(0.239)DT(0.239)AS(0.281)VNENGLGK 57.427 0.00048841 5679500.0 1737.9 1969.3899999999999 1468.52 1807.51 3252.58 2426.56 1780.02 2084.8 2963.7999999999997 2750.32 2500.13 True False 2031.2150324244012 2069.623539055193 1676.7782179697472 2250.3500311422076 2774.129790666672 2683.336968579833 2103.4265930479173 2380.3267844322295 2292.504032216056 2129.0208018198036 1879.2787209222722 1.0808482051175277 1.1012861030212204 0.8922456255700346 1.19745411156352 1.4761672974753015 1.427854707609823 1.1192733518611027 1.266617217516337 1.2198850583967609 1.1328925178139453 1.0 10.875963337301865 -4.182640445516448 11.373460779668399 1.1488834275801039 1.1643887752287925 0.0 0.1657647001018843 0.0 0.0 0.02406478939804497 0.0 6.566887170460993e-05 4.182640445516448 0.015505347648688605 RTEARS(ph)SDEENGPPS(ph)SPDLDR ddPTM_A549_MK2206_60min_R1 1 RTEARSSDEENGPPSSPDLDR 21 2 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 RT(0.031)EARS(0.722)S(0.247)DEENGPPS(0.63)S(0.37)PDLDR 101.73 1.0029000000000001e-09 17743000.0 936.66 1072.2 723.11 769.54 1247.6 978.53 572.24 872.27 1161.6 1426.4 1847.5 True False 1094.7453088616369 1126.7704002635228 825.6578713235803 958.0773345459636 1064.0796926857265 1082.0773951043554 676.2086008054624 995.9169437148406 898.4994546940324 1104.175249322176 1388.7147615939552 0.7883154547915205 0.8113764117911623 0.5945482068440728 0.6899021750487411 0.7662334426865203 0.7791934132408559 0.4869312399540679 0.7171501097689316 0.64700072292941 0.7951058632478369 1.0 10.439534588594258 -10.741487033672145 0.9203078800866609 1.005964579933074 0.6947678662807049 0.27510204865035903 0.10793884264114181 0.32659098251259233 0.4762275577111069 0.06920565912432763 0.01646405870142451 1.8134808184786723e-11 10.741487033672145 -0.31119671365236923 RTEARSS(ph)DEENGPPS(ph)SPDLDR ddPTM_A549_MK2206_60min_R1 1 RTEARSSDEENGPPSSPDLDR 21 2 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 RT(0.012)EARS(0.457)S(0.532)DEENGPPS(0.611)S(0.389)PDLDR 105.84 6.580700000000001e-10 16131000.0 938.5 976.24 952.03 847.12 1202.9 844.28 901.72 892.07 1297.6 1614.7 1340.3 True False 1096.8958558779557 1025.9264461418213 1087.0421695678215 1054.6644380286623 1025.9550034719948 933.6211492122935 1065.5508519472633 1018.5236543497973 1003.6956718414053 1249.938148542146 1007.4665196018293 1.0887665590231927 1.0183231166305038 1.0789859001939262 1.0468481259759248 1.018351462317053 0.9267019112270639 1.0576538586794826 1.0109751882894709 0.9962570986856076 1.240674627119268 1.0 9.976516180182584 -6.804770308549204 3.7039613724854066 0.998925158258393 1.0577446769198735 0.0 0.07999298266547664 0.16124715351504132 4.59163634141313 0.004388980842787032 0.008903820675030311 1.567579919017568e-07 6.804770308549204 0.0588195186614805 RTEARSS(ph)DEENGPPS(ph)SPDLDR ddPTM_A549_PD325901_60min_R1 2 RTEARSSDEENGPPSSPDLDR 21 2 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 RT(0.076)EARS(0.432)S(0.492)DEENGPPS(0.596)S(0.404)PDLDR;RT(0.045)EARS(0.434)S(0.52)DEENGPPS(0.545)S(0.455)PDLDR 98.62700000000001 3.6353000000000003e-07 51887000.0 2130.94 1708.74 1794.7199999999998 1788.37 2314.6 1843.29 1859.28 1785.88 2314.37 2026.8000000000002 2114.94 True False 2347.271460084884 1852.7415166235523 1916.520491728088 1898.8335532170438 2152.0304809365143 1828.278857380852 1930.035917837054 1750.2592224042423 2217.105077338472 1898.8275021041486 1854.8157877092722 1.265501121803477 0.9988816835076212 1.0332672950207213 1.0237316103299585 1.160239467011604 0.9856929564087905 1.0405539626232532 0.9436296768671789 1.1953235960303275 1.0237283479505161 1.0 10.857060196384154 -11.34223680137232 1.9809926948302268 0.9994565990999423 1.0872622350657668 0.035976743801969246 0.09394431346100733 0.6848773435240457 4.85616484929053 0.0754147691391488 0.014419960161356353 4.547400431167561e-12 11.34223680137232 0.08780563596582447 RTEARSS(ph)DEENGPPSS(ph)PDLDR ddPTM_A549_MK2206_60min_R1 1 RTEARSSDEENGPPSSPDLDR 21 2 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 RT(0.189)EARS(0.371)S(0.44)DEENGPPS(0.225)S(0.775)PDLDR 109.25 1.4202000000000002e-10 7267700.0 127.97 240.21 305.76 189.18 301.52 342.56 254.47 268.23 405.4 317.09 557.18 True False 149.568207433886 252.4356629801349 349.1213656786629 235.52910849261295 257.1668074211286 378.8094718270753 300.7039050869673 306.2524239199237 313.5775472907718 245.45914877143056 418.8168286143008 0.35712081562898995 0.6027352430305741 0.8335896311372383 0.5623678238333584 0.614031695603044 0.9044752883507714 0.7179842941886495 0.7312323741459764 0.7487224148281622 0.5860775690020809 1.0 8.71017560260366 -11.91757888794299 0.0564189984586169 1.9477948806914351 2.3206539663523486e-15 0.06561317500294284 0.16474369450757542 77.27302171906555 0.6580412514054716 16.976239797790363 7.313308807270236 1.2089855553627015e-12 11.91757888794299 -1.947794880691433 RTEEPDRDER ddPTM_A549_MK2206_60min_R1 2 RTEEPDRDER 10 2 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 0 ; 45.879 0.01376 6884200.0 393.45 513.37 308.51 402.89 549.76 256.78 261.353 350.03999999999996 561.88 647.7 741.3699999999999 False True 459.8547410710511 539.498340219441 352.26135703010294 501.59806808641946 468.8910322626685 283.95228916323106 308.83745709197194 399.6592419525411 434.6150771379844 501.3841201528136 557.2673682289096 0.8251958885239371 0.9681139987328855 0.6321227064661069 0.9001030684437586 0.8414112488819934 0.50954408126512 0.554199787569672 0.7171768252333275 0.7799040495036789 0.8997191451318916 1.0 9.122225866117965 -10.213755460338039 0.8722867674307504 0.9859252388397599 0.7458758097856185 0.2393730412029823 0.13615632281654164 0.5168645114717687 0.7701328741057435 0.06793916884979427 0.02750835975871775 6.112861269649528e-11 10.213755460338039 -0.2400494290541414 RTEKS(ph)PSLR ddPTM_A549_PD325901_60min_R1 2 RTEKSPSLR 9 2 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 RT(0.131)EKS(0.855)PS(0.014)LR;RT(0.003)EKS(0.987)PS(0.01)LR 56.205 0.0052745 34055000.0 6743.299999999999 6653.6 6603.3 7314.7 7738.1 7020.299999999999 7602.900000000001 7397.5 7397.0 8029.4 8894.900000000001 True False 7427.874851844912 7214.322222811229 7051.4396468686355 7766.51240611099 7194.602550995787 6963.129004373045 7892.232519966518 7249.951059273513 7086.129813760409 7522.422313694026 7800.88368941682 0.9521837714260558 0.924808330702154 0.9039283147414532 0.9955939243969937 0.9222804540409245 0.8926077200483932 1.0117100618579442 0.9293756128051572 0.9083752682242793 0.9643038677655748 1.0 12.929421847371096 -10.961435452382561 1.2082334853340309 1.000238635387737 0.935497867142435 0.1559963638711801 0.03652906158762288 0.4591848625971887 1.184728838625253 0.02472090320259011 0.005648002702038585 1.092860042952868e-11 10.961435452382561 -0.06474076824530206 RTEKS(ph)PSLRK ddPTM_A549_PD325901_60min_R1 2 RTEKSPSLRK 10 3 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 RT(0.076)EKS(0.924)PS(0.001)LRK;RT(0.031)EKS(0.969)PS(0.001)LRK 57.802 0.0036718000000000002 29253000.0 4695.200000000001 5877.1 4412.0 6602.8 5699.8 5811.8 5688.0 5248.3 6513.200000000001 5757.3 5943.0 True False 5171.853247576448 6372.383842684248 4711.424851511279 7010.6399599531915 5299.465711242526 5764.470627696151 5904.459952593033 5143.618539288301 6239.472854263121 5393.783095453038 5212.048675780966 0.9922879791220494 1.2226255430604587 0.9039487434958242 1.3450833628108294 1.0167721064977318 1.1059894076742118 1.1328481984501646 0.9868707794670756 1.197124824113084 1.0348681355407414 1.0 12.347634842086917 -11.140771179645506 1.5164954358772427 1.0000811850246705 1.1142993945493496 0.0551724462946348 0.1198686160801977 0.6868855467145992 2.8337101132253077 0.07803118105917672 0.016764285445011226 7.2315071569284524e-12 11.140771179645506 0.11421820952467909 RTEQDHYETDYT(ph)TGGESCDELEEDWIR ddPTM_A549_PD325901_60min_R1 2 RTEQDHYETDYTTGGESCDELEEDWIR 27 1 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 RT(0.005)EQDHY(0.032)ET(0.034)DY(0.221)T(0.236)T(0.236)GGES(0.236)CDELEEDWIR;RT(0.001)EQDHY(0.001)ET(0.018)DY(0.066)T(0.304)T(0.304)GGES(0.304)CDELEEDWIR 48.097 0.004302 1308250.0 120.4 169.53 245.56 274.15999999999997 166.38 264.90999999999997 157.87 187.18 135.49 127.98 245.56 True False 132.62291936620463 183.8168880655867 262.225178272237 291.09424053746386 154.69404277983986 262.75266079063056 163.8778292397788 183.44654806013062 129.79582647916695 119.89932095879657 215.35767673309343 0.6158262913031548 0.8535423062415498 1.2176263333172443 1.351678031418567 0.7183121824422452 1.2200756656391534 0.7609565246326607 0.8518226554212307 0.6026988610210131 0.5567450521273755 1.0 7.750590941203887 -7.8076514096806955 24.999974793318838 0.8076985596333908 1.0032891621637796 0.19086841550748201 0.23629517727767366 198.79229129190438 107542.73609512715 0.038264704422383236 0.052870394553381606 1.5572150425833675e-08 7.8076514096806955 0.19559060253038885 RTES(ph)DSGLKK ddPTM_A549_MK2206_60min_R1 3 RTESDSGLKK 10 2 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RT(0.132)ES(0.867)DS(0.001)GLKK;RT(0.131)ES(0.851)DS(0.018)GLKK;RT(0.029)ES(0.967)DS(0.004)GLKK 70.889 0.00095027 62974700.0 8142.3 9557.9 8185.5 7369.4 11330.7 8142.0 7593.400000000001 8025.1 10876.5 12213.2 12736.7 True False 9516.521179877547 10044.356284908334 9346.32698444105 9174.903330824933 9663.969039687534 9003.581035777815 8973.022489438346 9162.682500838011 8412.990116201485 9454.229637564222 9573.825874962784 0.9940144414747402 1.0491475838490094 0.9762374108853721 0.9583319616057461 1.0094155843131103 0.9404370993756782 0.9372452148836713 0.9570554781866272 0.8787490211413719 0.9875079995228108 1.0 13.224879851779708 -7.268818442254812 23.65036065104848 0.9419999239545597 0.9969532168488155 0.28191251117420346 0.03630218570303146 305.4749905876376 979067.5820327612 0.00704695157925673 0.011415904476661437 5.384948544028495e-08 7.268818442254812 0.05495329289425588 RTES(ph)DSGLKK ddPTM_A549_PD325901_60min_R1 3 RTESDSGLKK 10 2 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 RT(0.14)ES(0.817)DS(0.043)GLKK;RT(0.099)ES(0.9)DS(0.001)GLKK;RT(0.002)ES(0.987)DS(0.011)GLKK 83.204 0.00020393 143489000.0 13568.199999999999 14022.9 14471.900000000001 14131.0 15254.1 15100.5 15014.499999999998 15448.0 15455.6 15926.3 16381.3 True False 14945.633675619076 15204.65899637182 15454.050160604273 15003.839776170498 14182.704639788168 14977.526534554814 15585.88501374966 15139.877521278444 14806.054880296791 14920.710700000642 14366.503949616477 1.0403111103462341 1.0583409192448465 1.0757001296071635 1.0443626249496165 0.9872063996590336 1.0425310560649412 1.0848766734349267 1.053831716774951 1.0305955389162058 1.0385763128126213 1.0 13.81042140806767 -9.67500064215244 0.8702797289088104 1.0043374173788489 1.0479362751905186 0.10221956386870457 0.026019443443660233 0.44466960473592315 0.7077740027386994 0.008758122637056734 0.005348699811504031 2.1134859148115824e-10 9.67500064215244 0.04359885781166972 RTES(ph)SCVK ddPTM_A549_MK2206_60min_R1 2 RTESSCVK 8 1 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RT(0.026)ES(0.95)S(0.024)CVK;RT(0.123)ES(0.866)S(0.011)CVK 77.37899999999999 0.0018728999999999998 8697100.0 1842.38 2254.1 2396.0 2716.3 3645.3 2525.0 3062.4 3423.3999999999996 4089.8999999999996 5845.9 6451.5 True False 2153.328702133648 2368.8240619604594 2735.7888283819852 3381.79362193934 3109.0811988997093 2792.19382404065 3618.79843965233 3908.6774337228003 3163.5441802282394 4525.307129846122 4849.4144976581365 0.4440389047324222 0.48847630226378963 0.5641482759832437 0.6973612223851899 0.6411250678615195 0.5757795761506975 0.7462340951469314 0.8060101761996972 0.6523559043583442 0.9331656702126553 1.0 12.24359485622655 -14.999999999999996 0.090388461734616 2.222644873081967 0.3027110041738774 0.8302769904233477 0.06866165350765767 40.76996011841886 0.2687679450139816 9.730411811621492 0.7605601036478279 1.0000000000000082e-15 14.999999999999996 -1.9199338689080896 RTES(ph)VPSDINNPVDR ddPTM_A549_MK2206_60min_R1 6 RTESVPSDINNPVDR 15 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 RT(0.374)ES(0.626)VPSDINNPVDR;RT(0.288)ES(0.712)VPSDINNPVDR;RT(0.111)ES(0.889)VPSDINNPVDR;RT(0.159)ES(0.841)VPSDINNPVDR;RT(0.253)ES(0.747)VPSDINNPVDR;RT(0.248)ES(0.752)VPSDINNPVDR 190.79 4.0428e-34 164246600.0 5928.38 5796.389999999999 5878.84 6311.4 8346.16 6592.87 6650.379999999999 6647.820000000001 10596.169999999998 8940.4 10210.900000000001 True False 6928.945609024776 6091.40149261656 6712.547911454575 7857.693283329509 7118.450920091302 7290.523127407084 7858.667962086942 7590.168843094908 8196.154413606451 6920.757430622534 7675.251723496471 0.9027646074216685 0.793641917172407 0.8745703923827355 1.0237701076662442 0.927455043370028 0.9498741396439668 1.0238970974761614 0.9889146462596013 1.0678678314243852 0.9016977787758829 1.0 12.905998351664087 -6.452059911080897 0.6241858676252067 1.0294738972091981 0.8203255508164161 0.36117788089950464 0.06097411143228968 0.5569101752448824 0.31182638796475054 0.009241790291692921 0.06339517118015407 3.531344514063466e-07 6.452059911080897 -0.20914834639278201 RTES(ph)VPSDINNPVDR ddPTM_A549_PD325901_60min_R1 4 RTESVPSDINNPVDR 15 1 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 RT(0.068)ES(0.932)VPSDINNPVDR;RT(0.043)ES(0.957)VPSDINNPVDR;RT(0.365)ES(0.634)VPS(0.001)DINNPVDR;RT(0.038)ES(0.962)VPSDINNPVDR 216.16 4.3891e-46 188518000.0 6073.32 6655.110000000001 6805.5599999999995 6213.83 7867.57 8864.68 6514.87 6957.4400000000005 9324.490000000002 7417.28 8416.82 True False 6689.87897545812 7215.959475810574 7267.426226756821 6597.644166468158 7314.979024843038 8792.488985155289 6762.796942923658 6818.668401193904 8932.614112087438 6948.951674959072 7381.604498617999 0.9062906278317424 0.9775597537312604 0.9845320523630663 0.8937954028427538 0.9909741203572429 1.191135204656581 0.9161689635620284 0.9237379762720302 1.2101182220965405 0.9413876991459067 1.0 12.849718725690737 -7.227606271293563 0.7297996212573806 1.0858311707943251 0.9364349451583266 0.0 0.10508529911527434 0.8509465693298057 0.873470537977962 0.021540217039073835 0.06025529401337553 5.920981834943939e-08 7.227606271293563 -0.14939622563599853 RTET(ph)TVKK ddPTM_A549_PD325901_60min_R1 1 RTETTVKK 8 2 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;E9PKL1;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 RT(0.205)ET(0.758)T(0.037)VKK 44.425 0.020589 4993100.0 1738.6 2264.7 2121.5 1991.8 2163.7 1816.9 1874.2 1794.9 1594.2 2536.4 4371.8 True False 1915.1013921103258 2455.5542169653418 2265.4777476158597 2114.8289622939915 2011.729176359776 1802.103768791275 1945.523706601593 1759.0993114281891 1527.201317979836 2376.2512711352674 3834.096315123548 0.49949224920517277 0.6404518862187778 0.590876587705872 0.5515847251807613 0.5246944810500805 0.47002047436390626 0.5074269258514705 0.45880415275157344 0.3983210625032575 0.6197682780586842 1.0 11.904670863610193 -10.815161934647778 1.0108479678152615 1.0059871955916924 0.5130945290944813 0.32815182916926855 0.12501413908163783 0.15545938890418037 0.2764148513718001 0.055753614243332646 0.013175495481506493 1.530516674114746e-11 10.815161934647778 -0.4928926664972111 RTFS(ph)LTEVR ddPTM_A549_MK2206_60min_R1 2 RTFSLTEVR 9 1 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 RT(0.03)FS(0.939)LT(0.03)EVR;RT(0.03)FS(0.68)LT(0.291)EVR 108.72 0.00018101 20615200.0 717.58 824.8100000000001 874.8299999999999 901.55 1393.3 1198.5 1039.3899999999999 971.55 1725.1299999999999 1647.14 1638.12 True False 838.6899608533872 866.7893059516472 998.8940487201224 1122.429790472117 1188.3474156933494 1325.324474500087 1228.2337089179193 1109.270187747089 1334.3908094665242 1275.0499300115873 1231.3295941879794 0.6811254799787989 0.7039458078836038 0.8112320644570064 0.9115591761703103 0.9650928730231849 1.0763360847946597 0.9974857379497146 0.900871864838606 1.0836991295953624 1.0355066068662468 1.0 10.266001269274831 -6.1835112437273905 1.0295894552645182 1.0288412342026152 0.6541587187499801 0.8707899998540708 0.047838241545668354 0.17536959314364967 0.30011603089059996 0.008226319142816099 0.05011675705738533 6.553733182351648e-07 6.1835112437273905 -0.3746825154526351 RTFS(ph)LTEVR ddPTM_A549_PD325901_60min_R1 6 RTFSLTEVR 9 1 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 RT(0.169)FS(0.83)LTEVR;RT(0.307)FS(0.65)LT(0.043)EVR;RT(0.055)FS(0.944)LT(0.001)EVR;RT(0.341)FS(0.472)LT(0.187)EVR;RT(0.236)FS(0.721)LT(0.043)EVR;RT(0.054)FS(0.946)LTEVR 118.87 6.6948e-05 45494800.0 4434.55 4724.360000000001 4816.21 4845.2699999999995 5286.49 4950.32 5068.96 4460.99 5463.110000000001 5239.0599999999995 5725.910000000001 True False 4884.742251456831 5122.4983973428625 5143.066972823467 5144.551323493429 4915.185179800431 4910.006235193366 5261.862046641346 4372.012054871048 5233.51448517678 4908.26485749643 5021.659369534071 0.9727346862855926 1.0200808179902787 1.0241767898527656 1.0244723795295498 0.9787970107292405 0.977765689361948 1.0478333274782758 0.8706309474903116 1.0421882688674613 0.9774189160010345 1.0 12.293948455336244 RTGGPAYGPSSDVSTAS(ph)ETESEK ddPTM_A549_MK2206_60min_R1 2 RTGGPAYGPSSDVSTASETESEK 23 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSSDVSTAS(0.992)ET(0.008)ESEK;RTGGPAYGPSSDVST(0.003)AS(0.99)ET(0.007)ESEK 137.32 7.4671e-23 8017900.0 2743.1 2293.8999999999996 2147.89 2241.63 4289.4 2931.8999999999996 2684.5 3060.1 4006.1000000000004 3195.5 3598.4 True False 3206.068217643923 2410.6497119609144 2452.4930995798745 2790.829450630594 3658.4349421338206 3242.15171196229 3172.2389012691597 3493.878546163213 3098.7247464271377 2473.634330628864 2704.8179692122826 1.185317553394404 0.8912428634385928 0.9067128093259851 1.0317993603996058 1.3525623475502337 1.1986580054059954 1.1728104949676161 1.29172409601402 1.1456315292557642 0.914528947524426 1.0 11.4013157904512 -4.927196201947693 20.808782092269755 1.093768558006396 4.184098726283546 0.03161325803579074 0.14980772188413613 1836.820632775317 565221.4349477077 0.020305806862276156 20218.5167532481 1.182507211763879e-05 4.927196201947693 3.09033016827715 RTGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_A549_MK2206_60min_R1 1 RTGGPAYGPSSDVSTASETESEKR 24 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSSDVS(0.009)T(0.138)AS(0.577)ET(0.138)ES(0.138)EKR 74.65 6.8647000000000005e-06 7122800.0 784.42 983.97 679.14 963.57 1182.6 953.6 824.26 608.85 989.28 1485.5 1109.3 True False 916.8109187722816 1034.0498701243214 775.4522641516455 1199.644693256301 1008.6411065807475 1054.50931905155 974.017372605744 695.1563520249242 765.2096595555374 1149.9245182754437 833.8301948774965 1.0995175329516298 1.2401204423596586 0.9299882265184368 1.4387158208303414 1.2096480947525936 1.2646571514557288 1.168124371831897 0.8336905479023271 0.917704425021403 1.379087163477435 1.0 9.703609806117807 -8.15316837667253 6.3720036700337 0.9507611176335791 1.1995232721644582 0.10109511835059481 0.1775746772618859 0.15136163072316294 7.781143749689172 0.018822411939622915 0.024366144351450847 7.027997904425916e-09 8.15316837667253 0.24876215453087913 RTGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_A549_PD325901_60min_R1 2 RTGGPAYGPSSDVSTASETESEKR 24 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSSDVS(0.005)T(0.119)AS(0.871)ET(0.004)ESEKR;RTGGPAYGPSSDVST(0.005)AS(0.979)ET(0.016)ESEKR 152.38 3.6013e-29 57494000.0 5238.8 5255.6 4752.9 4722.5 5754.0 5887.5 4502.5 4936.3 5709.6 5470.1 5888.299999999999 True False 5770.639119399276 5698.507856529804 5075.4603755095095 5014.19809942433 5349.858890222375 5839.554151994402 4673.845101362539 4837.841624047565 5469.64536766884 5124.716952466892 5164.076429009098 1.1174581164180344 1.1034902242187097 0.9828399027942751 0.9709767406340407 1.0359759317599653 1.1308032001987463 0.9050689248337429 0.936826108318437 1.0591720403174543 0.992378215720994 1.0 12.334294637541204 -5.706123127013327 7.828934112879272 1.0155614609324135 1.1117744398186982 0.31762439073659643 0.05872346405502033 0.24448403843213293 29.628214096663946 0.008174232634607424 0.03178090884459555 1.967328452507717e-06 5.706123127013327 0.09621297888628466 RTGGPAYGPSSDVSTAS(ph)ETESEKREEPNR ddPTM_A549_PD325901_60min_R1 1 RTGGPAYGPSSDVSTASETESEKREEPNR 29 3 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSSDVST(0.021)AS(0.972)ET(0.006)ES(0.001)EKREEPNR 215.84 1.4297999999999995e-90 22361000.0 2671.3 3166.7 3073.3 2806.7 3492.4 3499.3 3205.5 3571.9 3659.2 3712.5 3518.3 True False 2942.4884094928784 3433.5689225346173 3281.872619254219 2980.0634845218137 3247.1058721259337 3470.8028609892167 3327.487056616905 3500.6556523986583 3505.416549210772 3478.092116420785 3085.571404341271 0.9536283637296221 1.112782195772144 1.063619080289881 0.9658060352546008 1.052351557172649 1.1248493086583384 1.0784022213633653 1.1345242723838382 1.1360672270551886 1.1272116767504565 1.0 11.591321965568271 -7.001837677043217 24.998081363139903 1.077053297993075 1.030129120241741 0.23432877102457017 0.05678335381044563 139.33461108263833 1895443.6125304583 0.009644756581897807 0.018043253596638584 9.957775320266428e-08 7.001837677043217 -0.04692417775133384 RTGS(ph)NAAQYK ddPTM_A549_MK2206_60min_R1 2 RTGSNAAQYK 10 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 RT(0.005)GS(0.995)NAAQYK;RT(0.109)GS(0.891)NAAQYK 106.26 0.00015897 190627000.0 7270.799999999999 7635.7 7173.9 6459.8 9904.1 7114.700000000001 7096.8 7869.700000000001 10250.7 10945.0 10662.7 True False 8497.933286006863 8024.324515288361 8191.266893125847 8042.451289991446 8447.220009881938 7867.572831644361 8386.196697532861 8985.254074945467 7928.932817004233 8472.516898367367 8014.857314450808 1.0602725603966856 1.0011812064103105 1.022010320552678 1.0034428529988781 1.053945151918248 0.9816235677033336 1.0463313779039494 1.1210747393774598 0.9892793478317258 1.0571014013052231 1.0 12.968461121502726 RTGS(ph)NAAQYK ddPTM_A549_PD325901_60min_R1 3 RTGSNAAQYK 10 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 RT(0.044)GS(0.956)NAAQYK;RTGS(1)NAAQYK;RT(0.024)GS(0.976)NAAQYK 133.04 3.866e-07 212169000.0 11046.5 11346.2 11201.5 11485.300000000001 12719.6 12411.4 11807.3 12267.7 11085.0 12256.8 13967.0 True False 12167.932547996506 12302.384093492365 11961.70115009147 12194.720895991153 11826.219176237842 12310.325673386553 12256.633262702473 12023.011099675527 10619.135999125872 11482.903556241426 12249.147544107822 0.9933697430111875 1.0043461432065246 0.9765333552411473 0.9955566991155357 0.9654728325912427 1.0049944805594377 1.000611121595825 0.9815385973907161 0.8669285728568084 0.9374451172943068 1.0 13.580393730680871 -8.549749425512141 24.999751618221154 0.9364803323190256 0.9911323910884545 0.3994398254915068 0.03048972758983774 243.72446510241855 226753.50315005166 0.00796795237392306 0.009034924850171714 2.8200095202732583e-09 8.549749425512141 0.05465205876942891 RTGT(ph)PSDPR ddPTM_A549_MK2206_60min_R1 3 RTGTPSDPR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 RT(0.146)GT(0.806)PS(0.048)DPR;RT(0.202)GT(0.793)PS(0.005)DPR;RT(0.218)GT(0.78)PS(0.002)DPR 100.55 0.00083359 595810000.0 3672.6 3634.0 3111.0 3466.67 4892.7 3596.84 3372.25 3334.1800000000003 5271.9 5637.4 6826.4 True False 4292.44509355075 3818.955077931021 3552.186579756409 4316.004305624732 4172.9903113205 3977.4552214108403 3984.944173888965 3806.810225498011 4077.823067494376 4363.907424655659 5131.216480944507 0.8365355680258957 0.7442592009347584 0.6922698726409133 0.8411269182761671 0.8132555558350512 0.7751485902381393 0.7766080789394902 0.7418923445610092 0.7947088341795644 0.8504625444788079 1.0 12.325085177351198 -10.473446302861653 0.6455255654141947 1.0142358685553317 0.7745896853493596 0.38988587049119516 0.05987295769057609 0.2980692426768611 0.20707754914287133 0.0384843176889005 0.009087039345759636 3.361659307830385e-11 10.473446302861653 -0.23964618320597209 RTGT(ph)PSDPRR ddPTM_A549_MK2206_60min_R1 2 RTGTPSDPRR 10 2 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 RT(0.186)GT(0.778)PS(0.036)DPRR;RT(0.204)GT(0.768)PS(0.028)DPRR 48.568000000000005 0.010676 39597000.0 1380.78 1560.1999999999998 1009.8499999999999 1243.91 1515.4299999999998 1165.33 979.0 727.05 2185.7 2299.8 2430.8 True False 1613.8219071701262 1639.6075158469948 1153.0619150006455 1548.6680058412417 1292.512254477982 1288.6444471165505 1156.8716276187404 830.1115639972428 1690.6424398456827 1780.2735827195322 1827.1652733329304 0.8832380577299147 0.8973504147526777 0.6310660189471237 0.8475795969000209 0.7073866132100418 0.7052697782319032 0.6331510589124169 0.4543166270246791 0.9252816176621962 0.9743363715927771 1.0 10.835391421218443 -8.972189293149048 24.77369185451019 0.9670362069065871 0.7212335702465242 0.4535790557119197 0.12133566176588804 108.9223157934657 97028.57491326207 0.021816430063283772 0.022837507777824312 1.0661313321227074e-09 8.972189293149048 -0.24580263666006286 RTGT(ph)PSDPRR ddPTM_A549_PD325901_60min_R1 2 RTGTPSDPRR 10 2 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 RT(0.148)GT(0.433)PS(0.419)DPRR;RT(0.041)GT(0.48)PS(0.48)DPRR 55.98 0.0055629 35517000.0 1408.6999999999998 1585.94 1814.85 1507.63 1766.42 2163.5299999999997 1821.1 1953.1999999999998 1588.89 1612.9499999999998 2222.3 True False 1551.7101869698702 1719.592729656915 1938.0166345796117 1600.7528810238434 1642.3527530181805 2145.9109289960847 1890.402957044158 1914.2418937442412 1522.1144788138133 1511.1080617322314 1948.9711883203838 0.7961688691289112 0.8823079273628738 0.9943793146833471 0.8213322447333695 0.8426767737051845 1.1010480513287746 0.9699491549042859 0.9821807039610102 0.7809835711966404 0.7753362752553047 1.0 10.928497048026212 -5.335897445843262 3.8225106034792846 0.9156757316784552 0.7920523226764487 0.11327099579682165 0.09878420824406914 0.4154870675955055 10.26042406004858 0.014328249452289376 0.1210761843512466 4.614265228043633e-06 5.335897445843262 -0.12362340900200652 RTHNDIIHNENMR ddPTM_A549_PD325901_60min_R1 2 RTHNDIIHNENMR 13 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 83.729 7.3193e-05 18730200.0 484.86 563.37 259.7 489.22 764.84 730.1 685.5799999999999 598.1 484.11 846.55 937.53 False True 534.0826302649331 610.8471670471872 277.32480370296435 519.4380083007662 711.120276954759 724.1543076638837 711.6701220637706 586.170426299627 463.7645402378735 793.0986885268728 822.2197534923322 0.6495619060433019 0.742924460830147 0.3372879361326979 0.6317508258521916 0.8648786093186348 0.8807308564262523 0.8655473418644976 0.7129121184572629 0.5640396478776625 0.9645823822137947 1.0 9.683380222249545 -6.636784553833535 5.717637886046043 0.7993403866973028 0.5766229635546184 0.38180152540855194 0.14661221695104307 0.2352150259812133 10.932916256687317 0.02600794775727499 0.05469431186729389 2.307891810978863e-07 6.636784553833535 -0.2227174231426844 RTHS(ph)DAS(ph)DDEAFTTSK ddPTM_A549_MK2206_60min_R1 2 RTHSDASDDEAFTTSK 16 1 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 2 RT(0.103)HS(0.879)DAS(0.847)DDEAFT(0.107)T(0.045)S(0.019)K;RT(0.174)HS(0.807)DAS(0.771)DDEAFT(0.171)T(0.057)S(0.02)K 64.847 0.00073651 73842000.0 29005.0 34098.0 31609.0 30100.0 46407.0 35373.0 32677.0 33848.0 47925.0 49232.0 48763.0 True False 33900.33489583388 35833.44255566644 36091.631500970856 37474.50135124035 39580.59177498115 39116.14738130296 38613.987922060864 38646.05765515257 37070.06402049885 38110.45700689103 36653.801309665 0.9248791035186553 0.9776187264434631 0.9846627146814944 1.0223905846665609 1.0798495752347628 1.0671784639970936 1.0534783990297616 1.0543533351058527 1.0113566041163673 1.039740917590502 1.0 15.161675205363307 -5.579714202509256 1.4619387936418746 1.0225491558240574 0.9190392788854148 0.5822096800621152 0.02828877634233422 0.5061644835571536 1.465528884772779 0.005010890409928813 0.06378777597729288 2.6319994700106145e-06 5.579714202509256 -0.10350987693864255 RTHS(ph)DAS(ph)DDEAFTTSK ddPTM_A549_PD325901_60min_R1 2 RTHSDASDDEAFTTSK 16 1 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 2 RT(0.248)HS(0.705)DAS(0.786)DDEAFT(0.166)T(0.067)S(0.028)K;RT(0.245)HS(0.752)DAS(0.881)DDEAFT(0.076)T(0.032)S(0.014)K 52.92100000000001 0.004128199999999999 115292000.0 68330.0 76227.0 79846.0 76501.0 83983.0 81236.0 79312.0 83095.0 83056.0 94612.0 94238.0 True False 75266.81129811257 82650.91680867973 85264.82971300301 81226.2930236233 78084.32380562137 80574.4409497099 82330.26156119152 81437.60503823357 79565.44515502013 88638.18217341516 82647.3234239016 0.9106987156990666 1.0000434785378312 1.031670793204955 0.9828060929089042 0.9447895052223723 0.9749189400416538 0.9961636765768704 0.985362884899934 0.9627104890853587 1.0724870268185962 1.0 16.334680477402294 -11.080425429748297 1.4114584169725333 0.9999651807627337 0.9768778881399173 0.16751732674044784 0.03699508822284064 0.9722318760910049 3.467352016582115 0.021011083847021682 0.004651074792900906 8.309493840772666e-12 11.080425429748297 -0.02308729262281639 RTHSDAS(ph)DDEAFTTSK ddPTM_A549_PD325901_60min_R1 1 RTHSDASDDEAFTTSK 16 1 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 RT(0.038)HS(0.197)DAS(0.765)DDEAFTTSK 142.04 1.3031e-14 33275000.0 6243.8 5912.7 6993.8 7020.1 7478.0 6622.0 6856.5 6476.5 6509.8 6142.5 6012.9 True False 6877.665979557377 6410.983979622451 7468.441325135899 7453.715633196132 6952.7710776994945 6568.072627517105 7117.427859520766 6347.3211267840425 6236.2157444393 5754.661501714389 5273.351418913575 1.3042305420590243 1.2157323626543466 1.4162608807653787 1.4134684076737978 1.3184729264889228 1.2455215110375235 1.349697240732557 1.2036598023826997 1.1825905859549364 1.0912721426215843 1.0 12.36450442654017 -9.370936149735785 0.4724771722444944 0.9996117229261028 1.3398973636922225 0.7247991108780056 0.06473576756192556 0.2887857309718319 0.15088384301958202 0.03807498897431199 0.021649610548101696 4.2566098949602757e-10 9.370936149735785 0.34028564076611967 RTHSGAK ddPTM_A549_PD325901_60min_R1 1 RTHSGAK 7 1 Q6ZNH5 Q6ZNH5 ZNF497 Zinc finger protein 497 0 15.082 0.058175 928870.0 1082.7 1207.4 912.79 961.4 1520.0 1356.4 1366.5 1809.8 1181.9 1527.4 1911.9 False True 1192.6149069583862 1309.1518353706688 974.7374184521716 1020.7834945021813 1413.240443715329 1345.3539281129865 1418.5029052774926 1773.7021192393665 1132.2288531679637 1430.9597033322848 1676.748420532665 0.7112664561684927 0.7807681935700174 0.581325979804722 0.6087875092065996 0.84284584759971 0.8023588462278665 0.8459843396344852 1.057822448209554 0.6752526731519332 0.8534134792133582 1.0 10.711450527722212 -6.806425179677483 9.00833547600074 0.8560631940872437 0.6721447090295605 0.4448511251790571 0.1056864314812932 0.2995847656326623 56.2659711948111 0.019559371135515174 0.03713705432664185 1.56161805060271e-07 6.806425179677483 -0.18391848505768327 RTIQEVLEEQS(ph)EDEDR ddPTM_A549_MK2206_60min_R1 2 RTIQEVLEEQSEDEDR 16 1 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR 132.13 1.6026e-10 13453800.0 1079.97 1033.97 917.5799999999999 904.3600000000001 1392.8 1237.92 771.8199999999999 1199.0 1903.5 1717.25 1854.93 True False 1262.2425332685305 1086.5946565570553 1047.7066415470547 1125.9282405982635 1187.9209650310036 1368.9158727352083 912.0497034000975 1368.9619217835004 1472.3602892648844 1329.3220323180788 1394.2996875363874 0.9052878262483218 0.7793121279952221 0.7514214131384236 0.8075224076021174 0.8519839569999201 0.9817945775731828 0.6541274530525171 0.9818276042235534 1.0559855262296038 0.9533976405509215 1.0 10.445324968719392 -8.497610363755346 22.138516592217737 1.0260412618220633 0.8215120187073731 0.5157288507157263 0.08279006936178694 86.43314617899108 75727.07665691117 0.01250364501864937 0.015069711874930248 3.1797255476326835e-09 8.497610363755346 -0.20452924311469023 RTIQEVLEEQS(ph)EDEDR ddPTM_A549_PD325901_60min_R1 2 RTIQEVLEEQSEDEDR 16 1 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR 178.07 6.540899999999999e-29 17108400.0 2555.3 2697.2 2453.8 2432.1 2916.5 2901.1000000000004 2656.3 2806.3 2423.3 2180.25 2990.8999999999996 True False 2814.7121748875634 2924.5025098242227 2620.3296238980897 2582.32529330014 2711.6551013787907 2877.4744034566393 2757.3869500831324 2750.3261450002396 2321.45712825275 2042.5886429162085 2623.0382608772156 1.0730732436766846 1.1149294135138499 0.9989673665765668 0.984478698544237 1.0337840441839148 1.0970005456551493 1.0512187302830218 1.0485268880830032 0.8850260260696279 0.7787109602561082 1.0 11.35702313625097 -8.736896043691099 24.21015303481014 0.9457067426313499 1.049543900073021 0.4939133297515351 0.06649826360214206 109.45825584162283 107972.10326699501 0.009248384026960113 0.010483907400187651 1.8327530727602055e-09 8.736896043691099 0.10383715744167099 RTIQEVLEEQS(ph)EDEDREAK ddPTM_A549_MK2206_60min_R1 5 RTIQEVLEEQSEDEDREAK 19 2 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 RT(0.001)IQEVLEEQS(0.999)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK 282.75 3.2937999999999994e-127 526458000.0 33385.08 40055.32000000001 34066.65 30496.92 50807.560000000005 39969.57 36929.259999999995 37131.74 54671.29 53426.17 54595.66 True False 39019.665317159306 42093.96469789543 38897.81322637697 37968.666769058735 43333.83522836776 44199.12336774671 43638.82852191589 42395.27785618457 42288.33010711027 41357.16109091346 41038.05085843827 0.9508167298626966 1.025730116742132 0.9478474833162984 0.9252063871169844 1.0559428218910507 1.0770278422874575 1.0633747853290856 1.0330724040093446 1.03046634093283 1.0077759597690439 1.0 15.324674589937795 -6.768250460645665 24.999938186268263 1.0271177445758948 0.9658842666280856 0.542365890099305 0.032447446914270886 124.28835870126875 456199.2624390686 0.005244008919337022 0.010068937329216765 1.705098763092877e-07 6.768250460645665 -0.0612334779478092 RTIQEVLEEQS(ph)EDEDREAK ddPTM_A549_PD325901_60min_R1 4 RTIQEVLEEQSEDEDREAK 19 2 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK 285.82 1.5135999999999995e-127 372926000.0 15893.5 16909.6 17924.5 16940.0 18148.699999999997 16278.2 18193.899999999998 18642.1 16929.399999999998 18262.6 20358.8 True False 17506.9964198237 18334.63133624637 19140.96435877468 17986.34532646862 16873.997921616054 16145.63573622001 18886.27882058408 18270.268691055473 16217.916191574346 17109.49631928518 17854.79666506639 0.9805206269347678 1.0268742725095712 1.0720348552736378 1.0073676930558169 0.9450680530364532 0.904274410909959 1.0577705909995505 1.0232694907582998 0.9083226482945804 0.9582576962503627 1.0 14.124024083791506 -6.59505355928726 5.505826785786951 0.9641094383982156 1.0285828976246236 0.2058416510571469 0.04755466931074494 0.23085604521223274 12.611308199727002 0.00768704001745316 0.01627091785515184 2.5406593598788687e-07 6.59505355928726 0.06447345922640801 RTIQEVLEEQS(ph)EDEDREAKR ddPTM_A549_MK2206_60min_R1 4 RTIQEVLEEQSEDEDREAKR 20 3 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR 185.28 2.9662e-44 205738000.0 5612.24 6798.41 6295.68 6721.59 7797.87 5578.49 6205.06 6049.889999999999 8716.73 8912.86 10052.400000000001 True False 6559.448905905696 7144.420030643102 7188.502091430675 8368.37985174364 6650.813652775925 6168.802109098028 7332.439082402389 6907.4804345110815 6742.404572757501 6899.438735749894 7556.111647873926 0.8680984627525108 0.9455154136920857 0.9513493747082621 1.1074981738918936 0.8801899657805181 0.8163990153366452 0.9703984567863722 0.9141580691776371 0.8923114012819836 0.9130938050248634 1.0 12.883428303572598 -4.075121041966108 15.776106446302892 0.9412931542530866 0.9397851605036651 0.0 0.07425815698994892 0.0 0.0 0.009926589327354336 0.0 8.41160669563873e-05 4.075121041966108 -0.0015079937494214546 RTIQEVLEEQS(ph)EDEDREAKR ddPTM_A549_PD325901_60min_R1 4 RTIQEVLEEQSEDEDREAKR 20 3 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR 250.62 4.6732999999999986e-98 370244000.0 6305.9 6249.9 6570.64 6349.8 7278.6 7156.700000000001 6172.360000000001 7618.2 6810.200000000001 8268.2 7529.599999999999 True False 6946.070325841777 6776.6010070259545 7016.563142868101 6742.012724557882 6767.376245806845 7098.418207996319 6407.25253744499 7466.249024637715 6523.990977108439 7746.144440940165 6603.50693406703 1.0518759797173054 1.026212446611655 1.0625510373389846 1.0209745809118955 1.0248154977917 1.0749467334358471 0.9702802770434634 1.1306490777074616 0.9879585260146585 1.1730349522279364 1.0 12.68901668681321 RTKS(ph)DTEPQK ddPTM_A549_MK2206_60min_R1 1 RTKSDTEPQK 10 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 RT(0.017)KS(0.966)DT(0.017)EPQK 126.51 1.2596e-06 26389000.0 8123.0 7730.8 6123.5 4194.4 3917.3 3051.2 2631.5 3150.4 4573.5 8589.4 8134.5 True False 9493.963811717247 8124.264699083411 6991.904378379415 5222.028188293769 3341.07035921593 3374.075958777359 3109.6094873122734 3596.9788476953627 3537.609552378748 6649.048574402624 6114.479149221126 1.552701968560414 1.3286928454271194 1.143499586431668 0.8540430118171162 0.5464194541642229 0.5518173954697605 0.5085649016741485 0.5882723221246985 0.5785626978267439 1.0874268130016589 1.0 12.57801389529711 -5.998774874533324 1.6470653301230724 0.7238019076124056 1.5005000655521767 0.7155592831863467 0.18432846954648424 0.193878195236902 0.9602063523884281 0.0305006960716497 0.1516526315613304 1.0028249382760366e-06 5.998774874533324 0.7766981579397711 RTLDS(ph)DEERPR ddPTM_A549_MK2206_60min_R1 2 RTLDSDEERPR 11 2 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 RT(0.005)LDS(0.995)DEERPR;RT(0.006)LDS(0.994)DEERPR 55.196000000000005 0.0057445 12155900.0 952.52 1284.8 730.96 700.76 922.8299999999999 856.69 664.8299999999999 767.22 1188.69 1328.13 1063.77 True False 1113.2820891218653 1350.1908321755022 834.6211193631448 872.4462314583118 787.0829294655089 947.3443671752016 785.6210053010903 875.9757845127087 919.4536129478724 1028.1045105736546 799.6065504415708 1.3922873549586003 1.688568998627987 1.0437897474729763 1.0910944025865175 0.9843377709085225 1.1847631396366685 0.982509466521057 1.0955085148176489 1.1498825421579124 1.2857629918187878 1.0 9.643146480580203 -5.7706723814148875 24.99974263722568 1.0697017762699468 1.5404281874229795 0.7125752934098636 0.10945525326087598 47.79282301394925 129407.67646977534 0.011736169889170941 0.03722472388622228 1.69561643971788e-06 5.7706723814148875 0.4707264111530327 RTLDS(ph)DEERPR ddPTM_A549_PD325901_60min_R1 2 RTLDSDEERPR 11 2 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 RT(0.002)LDS(0.998)DEERPR;RT(0.01)LDS(0.99)DEERPR 66.00399999999999 0.001766 11649800.0 857.45 1105.92 873.58 1147.44 1152.29 880.05 875.5 1084.3000000000002 975.45 1092.44 1120.98 True False 944.4976927786724 1199.1197596265783 932.8663920632873 1218.3147627746855 1071.3571255846953 872.8831645796478 908.8176315919826 1062.672785883106 934.4552287187498 1023.4631519630232 983.1065664776959 0.960727682007707 1.2197251045965658 0.9488965122118851 1.2392499494126061 1.0897670325030848 0.8878825494036116 0.9244345044384376 1.0809334634906187 0.9505126510005364 1.0410500619784466 1.0 9.941203999622276 -7.143792580922288 8.299965675417152 0.9749495017715398 1.099925539913981 0.2431000158067066 0.09673335012635675 0.2749618233385858 17.96135782922264 0.012568418172774438 0.02181429107446971 7.181371917578015e-08 7.143792580922288 0.12497603814244107 RTLDS(ph)DEERPRPAPPDWSHMR ddPTM_A549_MK2206_60min_R1 1 RTLDSDEERPRPAPPDWSHMR 21 3 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 RT(0.199)LDS(0.801)DEERPRPAPPDWSHMR 99.219 4.85e-08 9159000.0 885.57 926.7 632.53 566.26 1135.0 813.33 752.0 774.94 1369.1 941.74 1147.8 True False 1035.0325658922122 973.8650717442696 722.2322652823278 704.9937254203777 968.0430035254086 899.3960407552411 888.6286659543339 884.790118154217 1059.0010360034435 729.0002799331643 862.7695823315522 1.19966279188371 1.128766117498594 0.8371090961859877 0.817128628382099 1.1220180026622695 1.0424521902182844 1.0299721781485387 1.0255230785526264 1.2274436392873223 0.8449536178166027 1.0 9.752831503740651 -8.567249392837837 24.99911379555833 1.1084081586156176 1.0190817773683374 0.0 0.14306069959496037 261.92732786901337 147572.83309321132 0.02320728950060738 0.02631459737175809 2.708635755913631e-09 8.567249392837837 -0.0893263812472802 RTLS(ph)APPAQR ddPTM_A549_MK2206_60min_R1 1 RTLSAPPAQR 10 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 RT(0.059)LS(0.941)APPAQR 71.933 0.00099672 8260300.0 447.38 864.58 570.2 597.37 926.14 450.37 524.54 558.9 1129.6 854.38 915.53 True False 522.8868066091419 908.5834290802421 651.0629340331419 743.7256768169581 789.9060328502399 498.0278544685894 619.8421282442639 638.1257865594647 873.7474036005319 661.3749646073193 688.1786336574372 0.7598126141030781 1.3202726510868665 0.9460667655038375 1.0807160240711151 1.1478212112633543 0.7236897952232829 0.9006994665760141 0.9272676531208787 1.2696520363569839 0.9610512914246327 1.0 9.426639290226579 -8.73757399143261 24.963846817259984 1.1273357278924168 0.9846101442361647 0.03934387625405378 0.17660704718796275 369.42176221646787 386425.0383475884 0.030185627177099477 0.03421811981719862 1.8298943177844858e-09 8.73757399143261 -0.1427255836562521 RTLS(ph)APPAQR ddPTM_A549_PD325901_60min_R1 2 RTLSAPPAQR 10 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 RT(0.005)LS(0.995)APPAQR;RT(0.029)LS(0.971)APPAQR 86.756 0.00030972 24902800.0 3465.3 3697.0 3497.4 3427.3 3430.2 2805.3 3123.0 3612.3 3198.8999999999996 3873.5 4393.0 True False 3817.094704980972 4008.5591646226303 3734.754595574695 3638.996537036949 3189.274585547581 2782.4545668942515 3241.847473971172 3540.2498427054707 3064.461357474405 3628.9265489443546 3852.688849521419 0.9907612200386055 1.0404575404838554 0.9693891049723952 0.9445342406742723 0.8278048682659003 0.7222110779176699 0.8414506337239962 0.9189036491086584 0.795408473709231 0.9419204848050836 1.0 11.911649960569036 -6.354074377752973 2.499400971025192 0.8798423514614288 1.0093663664104995 0.3913769137219064 0.07336648160182226 0.31913301424692214 3.8555410630994804 0.013612524373112259 0.03766917409424256 4.42512580679076e-07 6.354074377752973 0.12952401494907073 RTLS(ph)FDTSK ddPTM_A549_PD325901_60min_R1 2 RTLSFDTSK 9 1 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 RT(0.016)LS(0.981)FDT(0.003)S(0.001)K;RT(0.007)LS(0.993)FDTSK 93.839 0.00040367 12730800.0 3373.3 3272.3 3397.4 3819.1000000000004 3618.0 3815.1 3552.6000000000004 3417.0 3562.4 3521.0 3873.8 True False 3715.7549327077904 3548.068205137851 3627.9679942258454 4054.997133194589 3363.884161422409 3784.0310904923717 3687.796137057311 3348.845254415355 3412.684716579704 3298.6834591023826 3397.347158041447 1.0937224722273904 1.0443643349016158 1.0678826229573046 1.1935775016681762 0.9901502569321383 1.113819375666585 1.0854928759130127 0.9857235950964596 1.0045145691107702 0.9709586055385804 1.0 11.730192932256472 -8.255541806383473 24.181188181206043 1.0009608252171893 1.0837239431907193 0.4698648558556401 0.04746162060095181 211.45992494322817 867026.7719791008 0.00692775751615256 0.008820189490020447 5.552111683901586e-09 8.255541806383473 0.08276311797352998 RTMLLLSRS(ph)PEAQPK ddPTM_A549_MK2206_60min_R1 2 RTMLLLSRSPEAQPK 15 2 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 RT(0.032)MLLLS(0.154)RS(0.814)PEAQPK;RT(0.002)MLLLS(0.066)RS(0.932)PEAQPK 82.48200000000001 5.762e-05 11769500.0 2368.9 3080.3999999999996 3352.5 2755.7 3884.2 2817.2 2804.1 2574.0 4446.5 4368.1 4535.5 True False 2768.712405955557 3237.179202547802 3827.934911164693 3430.8466237080725 3312.839325368627 3115.3142340939867 3313.568673141686 2938.872382544395 3439.374849601423 3381.343176222797 3409.210176568003 0.8121272267064436 0.9495393463264322 1.122821625218253 1.006346469129061 0.9717322059338709 0.9137935394848913 0.9719461404627748 0.8620390736668838 1.0088479945415938 0.9918259658683586 1.0 11.735221828506463 RTMLLLSRS(ph)PEAQPK ddPTM_A549_PD325901_60min_R1 3 RTMLLLSRSPEAQPK 15 2 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 RT(0.005)MLLLS(0.09)RS(0.905)PEAQPK;RT(0.011)MLLLS(0.209)RS(0.78)PEAQPK;RT(0.138)MLLLS(0.133)RS(0.73)PEAQPK 96.14299999999999 3.6643000000000002e-06 34944300.0 5185.099999999999 5705.7 5874.2 5969.3 6454.400000000001 7013.0 6012.1 6995.0 8160.2 5850.1 7100.6 True False 5711.487534931122 6186.539363155889 6272.858536434167 6338.010103736082 6001.0652104712 6955.88845315274 6240.893755447355 6855.479237528657 7817.255171859899 5480.72368761569 6227.271214411972 0.9171734036110142 0.9934591171873458 1.007320593636052 1.0177828916569143 0.963674939447433 1.1170042565441032 1.0021875618655978 1.1008801450084273 1.2553259530062182 0.8801164264263096 1.0 12.604384398495291 -7.521550187083733 1.1414467784548046 1.1188634087400235 0.9802172873925211 0.0 0.10003068804349201 0.4769093566687779 1.2436300101961748 0.016929008759881025 0.031679964079197306 3.00919140652806e-08 7.521550187083733 -0.13864612134750243 RTNS(ph)ESLR ddPTM_A549_MK2206_60min_R1 1 RTNSESLR 8 1 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 RT(0.057)NS(0.943)ESLR 62.466 0.0043286 25775000.0 294.85 510.69 525.87 277.85 339.03 361.84 515.23 394.14 690.89 776.6 681.45 True False 344.6134716096061 536.6819396666463 600.446273447928 345.92326247316043 289.1591361103254 400.1296686300473 608.8406217548553 450.0105520031265 534.4045181246208 601.1655206278757 512.2271579367804 0.6727746982367903 1.0477420639475037 1.1722265486009933 0.6753317490359515 0.5645134812356313 0.7811566849398324 1.1886144893356065 0.8785370807275067 1.0432959475970964 1.1736307052701649 1.0 9.000639935451282 -7.735126497970248 24.999444887286383 1.019530011186559 0.8273203918798769 0.29047616367789175 0.18062804196250049 272.31732587354367 258723.76874658855 0.027482833444552438 0.04075671161278799 1.840235913577177e-08 7.735126497970248 -0.19220961930668212 RTNS(ph)ESLR ddPTM_A549_PD325901_60min_R1 4 RTNSESLR 8 1 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 RT(0.004)NS(0.915)ES(0.081)LR;RT(0.026)NS(0.974)ES(0.001)LR;RT(0.001)NS(0.98)ES(0.02)LR;RT(0.073)NS(0.924)ES(0.003)LR 131.83 0.00044912 129702000.0 4012.32 4433.299999999999 3675.9199999999996 3956.65 3978.21 3405.37 3627.98 4504.4 3790.7599999999998 4324.74 4457.92 True False 4419.647772686129 4806.909749667702 3925.390036302663 4201.043284295877 3698.7942536794512 3377.6377957668233 3766.044764206833 4414.556208366562 3631.447539922996 4051.675178335253 3909.6241010832064 1.1304533782318396 1.229506884903818 1.0040325961810723 1.074538926423113 0.9460741385993241 0.8639290398355713 0.9632754113530779 1.1291510626669858 0.928848259073516 1.0363336918279917 1.0 11.932814187956112 -5.996537348339503 1.5859850638648525 0.9713743237083472 1.1842425316758076 0.43244763315281065 0.07621381773585238 0.25742493307174175 1.1679800617765512 0.010582799383301672 0.05457615774067518 1.0080049195020914e-06 5.996537348339503 0.21286820796746042 RTNS(ph)SEQER ddPTM_A549_PD325901_60min_R1 2 RTNSSEQER 9 1 E7EQ49;A0A087WTQ2;A0A3B3IT47;Q9Y2I8-3;Q9Y2I8;Q9Y2I8-2 E7EQ49 WDR37 WD repeat-containing protein 37 1 RT(0.1)NS(0.693)S(0.207)EQER;RT(0.012)NS(0.948)S(0.04)EQER 64.12100000000001 0.0026840999999999996 7401400.0 755.3399999999999 660.89 439.17 538.39 675.72 462.94000000000005 493.14 488.25 536.75 880.02 1185.29 True False 832.0215607480812 716.5855196936571 468.9747171437462 571.645127527594 628.2597583074495 459.1699701272676 511.9067125565624 478.5114707252844 514.1922640984045 824.4553870148475 1039.506844172375 0.8004002719294384 0.6893514205422877 0.451151158621885 0.5499195418792275 0.6043825125631103 0.4417190446618419 0.4924515075839906 0.4603254643371409 0.4946501958895609 0.793121653442556 1.0 10.021683541676108 -10.68803985480269 0.9033438818325764 1.0057709472246612 0.5473812918758753 0.5259380836787353 0.12006343496782952 0.26687361755196126 0.37987301671724893 0.08102479935469711 0.020301670130544628 2.050973954207374e-11 10.68803985480269 -0.45838965534878595 RTNS(ph)SSSSPVVLK ddPTM_A549_MK2206_60min_R1 1 RTNSSSSSPVVLK 13 1 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;Q7Z589-2 E9PMC9 C11orf30;EMSY Protein EMSY 1 RT(0.361)NS(0.499)S(0.094)S(0.019)S(0.026)S(0.001)PVVLK 83.41799999999999 0.0001905 13099000.0 2602.3 2674.8 3177.5 2423.1 4130.5 2697.3 2676.8 2521.7 4024.2 4174.5 4017.8 True False 3041.5046198734185 2810.935895005473 3628.117279709413 3016.759608777092 3522.9089216402626 2982.726495677166 3163.139910939574 2879.1586973823632 3112.7251253268983 3231.4775506838346 3020.069374361134 1.0070976003711236 0.930752094262768 1.201335740996647 0.9989040763062795 1.166499336587425 0.9876350924250316 1.0473732616187683 0.9533419072505316 1.0306800074701479 1.0700010993513756 1.0 11.560365974906885 RTNS(ph)SSSSPVVLK ddPTM_A549_PD325901_60min_R1 1 RTNSSSSSPVVLK 13 1 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;Q7Z589-2 E9PMC9 C11orf30;EMSY Protein EMSY 1 RT(0.224)NS(0.453)S(0.211)S(0.098)S(0.011)S(0.002)PVVLK 93.76799999999999 7.3038e-05 14605000.0 3812.4 5098.2 4453.3 5100.0 5734.4 5735.8 5341.0 4952.6 6086.5 5438.2 5369.2 True False 4199.432041459458 5527.843206134456 4755.527717868354 5415.015417059624 5331.6355266060455 5689.089546498427 5544.254677707343 4853.816507760463 5830.705571373895 5094.83112391098 4708.822438163077 0.8918221267858353 1.1739332452490776 1.0099186750655003 1.1499723100988355 1.1322651462487359 1.2081766983589541 1.1774185054788708 1.030792001928607 1.2382513139842382 1.0819756299620602 1.0 12.201150606702512 -5.252700065625496 24.260891048805597 1.119445261525937 0.8918219481861964 0.42212237179210976 0.0768356319985682 682.9742263550589 1895915.2971824321 0.012746473314811761 0.2048480376916414 5.588560211061608e-06 5.252700065625496 -0.2276233133397405 RTNS(ph)TGGSSGSSVGGGSGK ddPTM_A549_MK2206_60min_R1 2 RTNSTGGSSGSSVGGGSGK 19 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 RT(0.123)NS(0.621)T(0.255)GGS(0.001)SGSSVGGGSGK;RT(0.063)NS(0.767)T(0.129)GGS(0.039)S(0.002)GSSVGGGSGK 174.84 1.0977999999999998e-34 377600000.0 8492.7 6863.9 6991.6 7044.0 10322.8 7517.5 7305.6 7237.6 10788.8 11602.2 12192.5 True False 9926.060133420047 7213.2431919126975 7983.114011901292 8769.780316217175 8804.329794530471 8312.996860287363 8632.932954781892 8263.551964220404 8345.154026173355 8981.254961922143 9164.765754118704 1.0830675218250083 0.7870624722373314 0.8710657998338506 0.9569017421177383 0.9606715578708326 0.9070604839574269 0.9419698425900518 0.9016653764998533 0.9105692660418506 0.979976488530098 1.0 13.161882291483975 -10.720050837847069 0.8455678636274957 1.0030670880738335 0.9197633065597183 0.11519230410403314 0.06818576701723207 0.956235628130353 1.1439601457216095 0.05195519895891387 0.011683958410667073 1.90523768070366e-11 10.720050837847069 -0.08330378151411522 RTNS(ph)TGGSSGSSVGGGSGK ddPTM_A549_PD325901_60min_R1 2 RTNSTGGSSGSSVGGGSGK 19 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 RT(0.247)NS(0.578)T(0.146)GGS(0.027)S(0.002)GSSVGGGSGK;RT(0.017)NS(0.978)T(0.005)GGSSGSSVGGGSGK 128.83 8.184100000000001e-17 247700000.0 4346.8 3770.9 4198.9 4264.1 4144.0 4475.8 4211.200000000001 4179.2 4883.0 5215.7 4850.9 True False 4788.083936054969 4088.6869769747022 4483.862604036879 4527.483772526264 3852.939736023902 4439.350568746762 4371.459520457063 4095.842577481023 4677.784491089913 4886.37981188307 4254.270052388674 1.1254771975198354 0.9610783816318852 1.05396755467352 1.064221057143325 0.9056641183040474 1.0435046468792384 1.0275463162011989 0.962760362422527 1.099550436029195 1.1485824246487317 1.0 12.05469590020704 -8.762556086794191 24.999993372286465 1.0470099229627419 1.0162880373944707 0.09561995482470487 0.06738321471522497 77.97296685645028 1745600.0725000622 0.010624205099567722 0.011621111473571366 1.727602855492725e-09 8.762556086794191 -0.030721885568271157 RTNST(ph)GGSSGSSVGGGSGK ddPTM_A549_PD325901_60min_R1 3 RTNSTGGSSGSSVGGGSGK 19 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 RT(0.016)NS(0.379)T(0.605)GGSSGSSVGGGSGK;RT(0.055)NS(0.324)T(0.548)GGS(0.072)S(0.001)GSSVGGGSGK;RT(0.244)NS(0.244)T(0.304)GGS(0.091)S(0.091)GS(0.022)S(0.005)VGGGSGK 154.45 1.3552000000000002e-26 324562500.0 4231.4 4031.72 4467.18 4114.860000000001 4242.7 3893.1 3307.75 4539.38 5007.87 5409.58 5407.19 True False 4660.96861300796 4371.487193722572 4770.3496981355775 4369.0255566748965 3944.707388520414 3861.3958843531905 3433.6282363202536 4448.8385048252785 4797.406639237032 5068.018195595303 4742.13990900153 0.9828829816177521 0.9218385112224577 1.005948746699881 0.9213194128628749 0.831841207601777 0.8142728722582581 0.724067257020937 0.9381499892865862 1.0116543862678102 1.0687196693575385 1.0 12.211322512443013 -8.574248978149058 5.429393241883274 1.0047218788633727 0.8847837184819201 0.38135581351881986 0.07684999858309682 0.17326530586130562 11.244432910339032 0.01360777778236651 0.015516677398172878 2.6653302102865836e-09 8.574248978149058 -0.11993816038145266 RTPALIALR ddPTM_A549_PD325901_60min_R1 2 RTPALIALR 9 1 S4R3Z2;A0A0A0MSS8;P42330;B4DK69;P52895;Q04828;H0Y804;P42330-2 S4R3Z2;B4DK69;Q04828;P42330-2 AKR1C3;AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 129.85 5.0513e-05 10533800.0 1077.72 1076.94 700.02 1037.56 983.28 1217.75 1106.49 978.21 1129.31 1379.6100000000001 1243.46 False True 1187.1293410244687 1167.6975133212588 747.527566762222 1101.6477247302707 914.2178049318486 1207.8330477437262 1148.5980824445603 958.6988341591002 1081.8490279813118 1292.5011891542842 1090.5223029423857 1.0885878609006192 1.0707690344073142 0.6854766424724055 1.0102019204539576 0.8383302225595549 1.1075729900111344 1.0532550130753655 0.8791189612283885 0.992046678057228 1.18521298066709 1.0 10.090803560386139 -7.254701530373439 24.92845866790385 0.9981053138450751 0.9359191565719992 0.08568431453439462 0.12915360919196997 1251.1436341430824 4628935.061443406 0.016404384848287774 0.028010067346066547 5.562864347343984e-08 7.254701530373439 -0.06218615727307586 RTPAPPEPGS(ph)PAPGEGPSGR ddPTM_A549_MK2206_60min_R1 2 RTPAPPEPGSPAPGEGPSGR 20 1 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 RTPAPPEPGS(1)PAPGEGPSGR;RTPAPPEPGS(0.999)PAPGEGPS(0.001)GR 90.684 1.5847999999999998e-06 110581000.0 2986.8999999999996 3091.3 2344.27 2514.8 4132.6 2527.7 2604.8 2733.8 4179.8 4147.5 4243.799999999999 True False 3491.015697306197 3248.633965990138 2676.7227365238055 3130.926112893661 3524.700014422117 2795.179536248537 3078.058442922669 3121.3245219113724 3233.0819737690367 3210.5768694361504 3189.9473370784463 1.0943803544115835 1.0183973660723318 0.8391118892186213 0.9814977433957137 1.1049398757943942 0.87624629527851 0.9649245324976895 0.9784877905759024 1.0135220529158002 1.0064670448060118 1.0 11.639316891359783 -8.751604381428315 22.701867515877204 1.0063854118106956 0.9786358304443697 0.01917611563371291 0.07457086831365832 225.5944050612002 520730.468935365 0.012391017719060069 0.013947835455303167 1.7717221656363012e-09 8.751604381428315 -0.02774958136632588 RTPAPPEPGS(ph)PAPGEGPSGR ddPTM_A549_PD325901_60min_R1 1 RTPAPPEPGSPAPGEGPSGR 20 1 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 RTPAPPEPGS(1)PAPGEGPSGR 100.95 7.7751e-10 63375000.0 3640.0 3305.1 3251.9 3117.0 3509.7 3269.8 3593.2 3324.6 3773.1 3610.6 4442.8 True False 4009.5301203736262 3583.6323762494576 3472.593489263267 3309.530010779382 3263.190779807695 3243.1718328987336 3729.9411922744844 3258.2882449017534 3614.52972830869 3382.6260998111493 3896.3637652296266 1.0290440939200476 0.9197376303077958 0.8912395501292767 0.8493893820471712 0.8374964393539841 0.8323585856742003 0.9572877218394586 0.8362382059853005 0.9276674217546198 0.8681494602729423 1.0 11.927912658641441 -9.76268461552982 0.8453045668442944 0.9911155168903483 0.891614335695382 0.0 0.06828519491711463 0.4621845414671716 0.6896119736942592 0.02132848257977494 0.012073433438954307 1.7270916499259686e-10 9.76268461552982 -0.09950118119496631 RTPHVQAVQGPLGS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 RTPHVQAVQGPLGSPPK 17 1 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPK;RTPHVQAVQGPLGS(1)PPK 95.223 1.2854e-06 143027000.0 7366.4 9270.1 8347.8 8089.400000000001 10938.5 9159.8 7398.0 8082.1 13394.3 12321.8 13233.099999999999 True False 8609.668228811268 9741.908494201525 9531.643564927848 10071.303363146972 9329.461140143327 10129.083956216846 8742.120838736917 9227.76242539319 10360.51243630189 9538.296822138242 9946.956055019742 0.8655580844218558 0.9793858985920885 0.9582472780823933 1.0125010412672406 0.937921218163541 1.0183099131221347 0.8788739781679438 0.9276971140066905 1.0415761745597987 0.9589161517733589 1.0 13.28003938758518 -8.761968896884726 24.999998818990115 1.019633195068972 0.9506907618508077 0.1530710986107231 0.04947348887496363 12.162777387710387 574234.7927946218 0.007752524114570949 0.008500111700738177 1.7299402488948464e-09 8.761968896884726 -0.0689424332181644 RTPHVQAVQGPLGS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 RTPHVQAVQGPLGSPPK 17 1 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPK;RTPHVQAVQGPLGS(1)PPK 118.08 5.0257e-10 248730000.0 7882.900000000001 7801.799999999999 8636.7 7621.799999999999 9803.8 9009.2 8370.1 9221.8 8803.9 10310.8 10129.2 True False 8683.166204915731 8459.28506641948 9222.838398696158 8092.581275636278 9115.214909273918 8935.832062190739 8688.628735794462 9037.863964637847 8433.902699386952 9659.774328347865 8883.372614289177 0.9774627927853203 0.9522605246584456 1.0382136153853256 0.9109807307439871 1.0260984543878995 1.005905352637936 0.9780777091145019 1.017391069479644 0.9494032351880367 1.0873994312486477 1.0 13.116891791210294 RTPHVQAVQGPLGS(ph)PPKR ddPTM_A549_MK2206_60min_R1 3 RTPHVQAVQGPLGSPPKR 18 2 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPKR;RTPHVQAVQGPLGS(1)PPKR;RTPHVQAVQGPLGS(1)PPKR 88.09 1.4829e-06 151822000.0 3311.79 4018.04 3043.55 3346.11 4648.38 3085.14 3515.7 3580.63 5054.719999999999 5069.74 5495.82 True False 3870.7391865083146 4222.541073563554 3475.1711555183597 4165.907100212586 3964.609459671753 3411.6074670498106 4154.457182042088 4088.1952677194813 3909.8339907291825 3924.4822129126546 4131.056217084329 0.936985357522018 1.0221456333856902 0.8412306618211823 1.0084363129661922 0.9597084259651997 0.825843873278902 1.0056646445189932 0.9896246995653092 0.9464489915580758 0.9499948697581577 1.0 12.012294977767503 -11.293668055761524 0.35838776268263567 1.0308417162163364 0.9437793425639407 0.006040682441698753 0.06247250156594963 7.734364031491789 0.9188984850888317 0.27330710362498806 0.019685432480278493 5.085479924649521e-12 11.293668055761524 -0.08706237365239566 RTPHVQAVQGPLGS(ph)PPKR ddPTM_A549_PD325901_60min_R1 4 RTPHVQAVQGPLGSPPKR 18 2 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPKR;RTPHVQAVQGPLGS(1)PPKR;RTPHVQAVQGPLGS(1)PPKR;RTPHVQAVQGPLGS(1)PPKR 111.44 3.8707e-10 251475000.0 6639.36 6534.59 7415.5199999999995 7251.46 8120.2699999999995 7560.57 7107.099999999999 7822.07 8087.2699999999995 8212.67 8283.5 True False 7313.382939561493 7085.2828324456 7918.781780344274 7699.366214939443 7549.930248610708 7498.999224618998 7377.564579654341 7666.0526775547905 7747.390166138993 7694.12061461697 7264.682013432884 1.006703793233972 0.9753052947595556 1.0900383204250257 1.0598352688669372 1.0392650682645683 1.032254296988202 1.0155385419503193 1.0552495846865348 1.0664458749623933 1.0591132000533574 1.0 12.826683934869333 -5.725425842131 24.99989681267352 1.0379118966518988 0.9910045057683022 0.3770145531525263 0.025631552949602728 180.82936760340036 125525.96283254768 0.004165103742813 0.0161302257319509 1.8818030056886792e-06 5.725425842131 -0.04690739088359652 RTPS(ph)DDEEDNLFAPPK ddPTM_A549_MK2206_60min_R1 2 RTPSDDEEDNLFAPPK 16 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RT(0.041)PS(0.959)DDEEDNLFAPPK;RT(0.016)PS(0.984)DDEEDNLFAPPK 175.77 1.1905e-28 118514200.0 6809.8 7187.5 6178.0 6507.799999999999 9493.3 8252.7 6499.9 6357.599999999999 10160.3 9621.5 9733.0 True False 7959.127756374754 7553.313049705343 7054.1332978897735 8102.211292146239 8096.848145698462 9125.995236301098 7680.847693931615 7258.809269333431 7859.008272665088 7447.996467578042 7316.027482865479 1.0879029329804255 1.032433662584729 0.9642026789006636 1.107460477851135 1.1067274097400133 1.2473976153964237 1.0498658885468328 0.9921790597881082 1.0742179811477333 1.01803833911527 1.0 12.836844779283881 -10.605619961095565 0.5541248457863447 0.9901664544647333 1.076421603173803 0.11737473683911281 0.06967196130290891 2.155190502052941 0.9738549125663766 0.09489114100357951 0.016909614781962252 2.479590928921048e-11 10.605619961095565 0.0862551487090697 RTPS(ph)DDEEDNLFAPPK ddPTM_A549_PD325901_60min_R1 2 RTPSDDEEDNLFAPPK 16 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RT(0.007)PS(0.993)DDEEDNLFAPPK;RT(0.084)PS(0.916)DDEEDNLFAPPK 182.39 2.3122e-34 222152000.0 8473.7 9175.6 9476.0 9440.900000000001 10438.0 9469.3 10401.2 9710.4 9964.7 10580.1 10510.3 True False 9333.943785991762 9948.860013770995 10119.098343817059 10024.04295116043 9704.870889145146 9392.185160336407 10797.023357755026 9516.718454338563 9545.918312177686 9912.070680388833 9217.599730281114 1.0126219470485838 1.0793330481782137 1.0978018833443586 1.0874895031761942 1.0528631284848786 1.0189404438426368 1.171348688779063 1.0324508258993719 1.0356186633726348 1.0753418428255552 1.0 13.170175405376746 -8.994416053281817 1.3893090039089844 1.0117610662662646 1.072713334642014 0.046028737541389364 0.04574179324352368 0.3444847648464994 1.3464845224232131 0.008534701332465464 0.00831529834641599 1.0129405256864712e-09 8.994416053281817 0.0609522683757493 RTPS(ph)EADR ddPTM_A549_MK2206_60min_R1 2 RTPSEADR 8 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 RT(0.042)PS(0.958)EADR;RT(0.027)PS(0.973)EADR 96.009 0.0020059 110909000.0 1701.6 1676.26 1496.99 1405.03 1678.0700000000002 1649.62 1813.75 2269.9 2168.6000000000004 2217.33 2512.8999999999996 True False 1988.7884798741934 1761.574474114653 1709.2856920699285 1749.2624130741929 1431.2281259258866 1824.1816934708672 2143.2848974397234 2591.6652762772032 1677.4155625425951 1716.4336129974345 1888.8775774882022 1.052894323897291 0.9326038357960527 0.904921373646093 0.9260856468000074 0.7577135453262724 0.965749032765074 1.1346870347679323 1.3720663039070835 0.8880488510924007 0.9087055897396586 1.0 10.883313485025711 -7.514273355458776 24.862151030073008 0.999513948443859 0.9104864809904031 0.13549280810616948 0.14210141333268902 894.2821593765949 2583704.7036561407 0.023542599660068962 0.03591694521065536 3.060036766201503e-08 7.514273355458776 -0.08902746745345591 RTPS(ph)EADR ddPTM_A549_PD325901_60min_R1 2 RTPSEADR 8 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 RT(0.013)PS(0.987)EADR;RT(0.003)PS(0.997)EADR 152.27 0.00044225 126752000.0 4135.0 3482.0 3795.0 2864.5 4363.0 3258.7 3181.4 3630.0 3544.8999999999996 4289.5 4601.4 True False 4554.782155973889 3775.4403600800615 4052.551521188871 3041.4336592484888 4056.5579315328823 3232.162227618543 3302.469917928879 3557.596802320088 3395.9201807218174 4018.6602379493515 4035.456970677862 1.1286905520414439 0.9355669971239654 1.0042360879164913 0.7536776333753348 1.0052288900633417 0.8009408230849295 0.8183633085236792 0.8815846205696242 0.8415206023498703 0.9958377123457002 1.0 11.978516336604278 -4.747869925817173 1.249874113356333 0.9021910976344146 1.5929704702880507 0.37166649924553874 0.08614589243201975 3.8773477562744154 2.0948438609435396 0.012847033376178842 4.723151956803144 1.7870227202975492e-05 4.747869925817173 0.6907793726536361 RTPS(ph)EADRWLEEVSK ddPTM_A549_MK2206_60min_R1 2 RTPSEADRWLEEVSK 15 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 RT(0.036)PS(0.964)EADRWLEEVSK;RT(0.015)PS(0.985)EADRWLEEVSK 145.88 4.042e-14 252290000.0 4741.0 5236.299999999999 4077.7000000000003 3890.3999999999996 5919.0 4920.3 4265.1 4617.1 6664.4 7486.7 8067.299999999999 True False 5541.164893678624 5502.805303954371 4655.979175915371 4843.548174646691 5048.322940851887 5440.962880169194 5040.013461651368 5271.58806427573 5154.924040859938 5795.449270261029 6063.966763846778 0.9137854987456254 0.9074596742122603 0.7678108006254595 0.7987425332743918 0.8325116441847712 0.8972613294334135 0.8311413399723437 0.869329973195897 0.8500910776083849 0.9557191679897317 1.0 12.566046130887973 -10.69607069671523 0.5895588431372829 1.0222585373626243 0.846826437481413 0.5351540574736888 0.04450949511694344 0.6171344305001543 0.3078160175666814 0.05818066979844715 0.009694097351217042 2.0133964720317828e-11 10.69607069671523 -0.17543209988121133 RTPS(ph)EADRWLEEVSK ddPTM_A549_PD325901_60min_R1 7 RTPSEADRWLEEVSK 15 2 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 RT(0.163)PS(0.837)EADRWLEEVSK;RT(0.005)PS(0.995)EADRWLEEVSK;RT(0.414)PS(0.586)EADRWLEEVSK;RT(0.22)PS(0.779)EADRWLEEVSK;RT(0.009)PS(0.991)EADRWLEEVSK;RT(0.041)PS(0.959)EADRWLEEVSK;RT(0.001)PS(0.999)EADRWLEEVSK 228.85 8.9185e-55 567580000.0 32297.600000000002 31441.579999999998 30149.49 31147.460000000003 29883.1 32825.509999999995 28408.24 29063.7 40249.100000000006 36674.83 43083.89 True False 35576.428575763515 34091.272290834626 32195.61569501153 33071.367863185864 27784.21414709839 32558.189929823155 29489.331118785412 28484.00170346844 38557.57029701554 34359.174974834365 37784.84466128098 0.9415528605366882 0.902247252739635 0.8520774925403659 0.8752548319214046 0.7353269385164241 0.8616732507884649 0.7804539461029947 0.7538472622770014 1.0204506765255117 0.9093374680468919 1.0 15.20552007123623 -8.777006114951496 24.999267744514597 1.0096572863875815 0.837144508512156 0.44558513020916124 0.06620178448775509 108.02793164019 173485.89855340202 0.010457439054880713 0.011151586427620621 1.671067085192708e-09 8.777006114951496 -0.1725127778754254 RTPS(ph)EAER ddPTM_A549_PD325901_60min_R1 4 RTPSEAER 8 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 RT(0.323)PS(0.677)EAER;RT(0.349)PS(0.651)EAER;RT(0.208)PS(0.792)EAER;RT(0.041)PS(0.959)EAER 82.494 0.0014747 905261000.0 4791.59 4631.530000000001 3951.9400000000005 4152.64 4721.74 5289.53 4702.06 4304.0 4876.18 5898.3 5001.630000000001 True False 5278.028689417874 5021.84528745595 4220.142413345759 4409.139141470291 4390.101271518702 5246.453821418085 4880.999466365959 4218.153343577315 4671.251111972722 5525.880331389826 4386.46121794487 1.2032543836990124 1.1448511768237557 0.9620836030833452 1.00516998154062 1.0008298383122458 1.19605612833302 1.1127419630197455 0.9616301464882414 1.064924749103625 1.2597581642312552 1.0 12.098841797963782 RTPS(ph)EAERWLEEVSQVAK ddPTM_A549_PD325901_60min_R1 2 RTPSEAERWLEEVSQVAK 18 2 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 RT(0.165)PS(0.835)EAERWLEEVSQVAK;RT(0.43)PS(0.57)EAERWLEEVSQVAK 101.5 2.4602e-09 12500100.0 4148.3 3944.25 4475.28 5421.35 5217.240000000001 6673.9 4839.950000000001 5015.780000000001 6014.24 4462.139999999999 6277.6 True False 4569.432362182948 4276.64578984658 4778.999412844832 5756.2144767208265 4850.7990609009 6619.549971124492 5024.136945772262 4915.736333096713 5761.482407882978 4180.399718886421 5505.494996985123 0.8299766623501112 0.7767958725216395 0.868041732026252 1.045539861515268 0.88108318390213 1.20235328063134 0.9125677070860189 0.8928781764016915 1.046496711201815 0.7593140528100851 1.0 12.426656566451943 -6.104323592279987 3.677904610370484 1.0094063224490426 0.8053032404928706 0.1846784007368546 0.11437759600975643 0.14103463085968304 3.453815579657316 0.011316564226560463 0.03330850179029332 7.864595812717558e-07 6.104323592279987 -0.204103081956172 RTPS(ph)LALTPPQAEQEVDVLDVNVR ddPTM_A549_PD325901_60min_R1 1 RTPSLALTPPQAEQEVDVLDVNVR 24 1 Q04721 Q04721 NOTCH2 Neurogenic locus notch homolog protein 2;Notch 2 extracellular truncation;Notch 2 intracellular domain 1 RT(0.408)PS(0.592)LALTPPQAEQEVDVLDVNVR 168.69 2.8793e-41 7846000.0 1307.5 1933.3 1690.9 1330.7 2660.7 1931.5 1996.7 2309.8 2265.9 1984.9 2110.3 True False 1440.2364374693732 2096.225975916939 1805.654642207712 1412.894316761028 2473.8216109166965 1915.7705043867838 2072.6855111361647 2263.7292269969553 2170.6721028795055 1859.5730752548473 1850.746478293888 0.7781921804854959 1.1326381006270219 0.9756358655196556 0.7634186169374779 1.3366615254603595 1.0351339456027702 1.1199186573878404 1.2231438792652873 1.1728630195101282 1.0047692091080438 1.0 10.853891568007697 -6.749293685629446 24.999997715877825 1.1083520296545444 0.932709229443062 0.3717702142866479 0.1320390964800391 228.9211694283602 471195.30707126006 0.018660991790665372 0.038617229812749496 1.781173865933188e-07 6.749293685629446 -0.17564280021148237 RTPS(ph)TKPTVR ddPTM_A549_MK2206_60min_R1 2 RTPSTKPTVR 10 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RT(0.078)PS(0.912)T(0.008)KPT(0.002)VR;RT(0.159)PS(0.838)T(0.004)KPTVR 66.533 0.0010325 64044000.0 2156.76 2248.5299999999997 2617.38 2048.33 2912.68 2345.11 2049.3 1934.93 3023.66 3118.6600000000003 3224.8 True False 2520.768360280597 2362.970572751853 2988.5638412480976 2550.1709419530266 2484.228630403864 2593.2679836419684 2421.6312834311393 2209.212252974604 2338.8058377928346 2414.1525399965626 2423.9931600477353 1.0399238751279958 0.9748255942707856 1.2329093540797138 1.0520536872731137 1.0248496866034649 1.0698330450696898 0.9990256257090472 0.9113937652081073 0.9648566160750952 0.9959403268072841 1.0 11.243169912524463 -7.837869016729944 4.3306734685009145 0.9766754396563099 1.0669100717552904 0.3441997158711585 0.06337482054332298 0.20005348926325447 7.151563042588324 0.009844082647791817 0.01388700444673612 1.4525496406838013e-08 7.837869016729944 0.09023463209898053 RTPS(ph)TKPTVR ddPTM_A549_PD325901_60min_R1 2 RTPSTKPTVR 10 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RT(0.045)PS(0.922)T(0.032)KPTVR;RT(0.27)PS(0.723)T(0.006)KPTVR 55.31399999999999 0.0035811999999999997 84071000.0 3173.3 2878.7 2990.4 3242.8 3634.7 2912.2 3366.5 3553.3 3550.3 3405.5 3936.0 True False 3495.45107994001 3121.2981517985295 3193.34652673602 3443.1003910668537 3379.411211034282 2888.484008736833 3494.613999719487 3482.426643990076 3401.093237500823 3190.4761488137347 3451.896952359732 1.0126174472127576 0.9042269206978488 0.9250990312885888 0.9974516732642135 0.9790011862098321 0.836781644585958 1.0123749486005233 1.0088443230060717 0.985282377904074 0.9242674949009445 1.0 11.753173681815515 RTPS(ph)VGK ddPTM_A549_MK2206_60min_R1 1 RTPSVGK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RT(0.278)PS(0.722)VGK 41.70399999999999 0.043739 50930000.0 3348.2 3415.3 3278.9 3186.9 5071.6 4136.0 4145.6 4560.4 6769.0 6241.9 6983.6 True False 3913.2943043692803 3589.1241820742457 3743.8973244497874 3967.690643065379 4325.5743583078975 4573.668774745397 4898.801858484423 5206.850665639264 5235.832307871816 4831.850454812175 5249.379382445224 0.745477516343355 0.6837235262661447 0.7132076102119781 0.7558399486868829 0.8240163347258381 0.8712780009843615 0.9332154339743115 0.9918983343158273 0.9974192997711859 0.9204612779504309 1.0 12.357931152241918 -7.31313325609067 0.8671737109407994 1.0010316174903646 0.7041144210672015 0.9324951276555434 0.029608712944523368 0.048375197744115445 0.07176949470807525 0.002894639430795654 0.00687491188057342 4.862579825664828e-08 7.31313325609067 -0.29691719642316317 RTPS(ph)VGK ddPTM_A549_PD325901_60min_R1 2 RTPSVGK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RT(0.117)PS(0.883)VGK;RT(0.187)PS(0.813)VGK 48.091 0.024213 183404000.0 4048.2 4001.2000000000003 4914.2 4781.2 4758.8 4556.9 4671.4 4617.9 4787.7 4919.1 4404.5 True False 4459.17028387267 4338.395166212621 5247.707163485209 5076.5238651069585 4424.558304968756 4519.790117235378 4849.172683288163 4525.792361827529 4586.489618675231 4608.507186501144 3862.7744224259227 1.1543957260316007 1.123129308567803 1.3585331654416186 1.314217013459142 1.145435332511604 1.170089066292624 1.2553600477251676 1.1716429350759794 1.1873563188281642 1.1930562550444979 1.0 11.915421714458244 -10.575553281864542 0.45585100863049216 0.9546361644420428 1.222860053376362 0.04946745977817113 0.08947896850463789 0.974349719824399 0.2851741851454604 0.11831336353949273 0.01963445002218212 2.657337511372832e-11 10.575553281864542 0.26822388893431925 RTPT(ph)MPQEEAAACPPHILPPEK ddPTM_A549_MK2206_60min_R1 1 RTPTMPQEEAAACPPHILPPEK 22 1 Q9NYV4 Q9NYV4 CDK12 Cyclin-dependent kinase 12 1 RT(0.449)PT(0.551)MPQEEAAACPPHILPPEK 80.67 3.8987e-05 4272400.0 1574.8 1589.0 1249.9 1163.1 2021.9 1662.8 1811.7 1563.9 2055.2 1938.2 2447.2 True False 1840.5877398365528 1669.873312832249 1427.1546146054443 1448.0595522135425 1724.481188394735 1838.756392322691 2140.862438975354 1785.5876142428835 1589.7004814800064 1500.3592738616392 1839.4927007159554 1.0005952940830758 0.9077901272357927 0.7758414121730282 0.7872059245736274 0.9374765051927326 0.9995997220358755 1.1638330710103397 0.9706956779702951 0.8642059198502248 0.8156375251055246 1.0 10.845092236231585 -6.977824220185337 22.66391176672768 0.9605939425937648 0.8639131246382397 0.18124151112832243 0.09955962963129047 117.14039898844592 119716.45693869347 0.01484720941478492 0.028055803748630516 1.052387739445941e-07 6.977824220185337 -0.09668081795552519 RTQAPTKAS(ph)E ddPTM_A549_MK2206_60min_R1 2 RTQAPTKASE 10 2 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 1 RTQAPTKAS(1)E;RTQAPT(0.074)KAS(0.926)E 88.09200000000001 0.00023343 675090000.0 3617.8 4125.1 3341.4 3385.0 4657.2 3991.1 3564.1000000000004 3616.7999999999997 5446.7 5921.299999999999 5821.799999999999 True False 4228.396193282118 4335.049970273322 3815.2607642552452 4214.325151958422 3972.1320493555336 4413.435552922233 4211.65083554234 4129.492475985459 4213.031146592617 4583.674217478547 4376.086386494016 0.9662506220929009 0.9906225762938902 0.8718431098687505 0.9630351825240836 0.9076905020921862 1.008534832983071 0.9624240619519817 0.9436496703379479 0.9627394832961619 1.0474368677056314 1.0 12.095425502714033 -10.506804558341315 0.31715796807521063 1.0175642387269266 0.9454385917956903 0.31288333905392374 0.03790420667959352 3.511965757223614 0.5020038415331198 0.09107413024652943 0.016325435856107295 3.1131169900968654e-11 10.506804558341315 -0.07212564693123624 RTQAPTKAS(ph)E ddPTM_A549_PD325901_60min_R1 5 RTQAPTKASE 10 2 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 1 RTQAPT(0.001)KAS(0.999)E;RTQAPTKAS(1)E;RTQAPT(0.022)KAS(0.978)E;RTQAPTKAS(1)E;RTQAPT(0.001)KAS(0.999)E 125.53 4.3995e-06 1119641000.0 20335.800000000003 21261.699999999997 20183.600000000002 20530.499999999996 24618.100000000002 21654.8 22831.9 23196.699999999997 22086.999999999996 22825.100000000002 26094.0 True False 22400.27544557527 23053.498076942637 21553.380469846583 21798.62235685148 22889.00958383446 21478.450488426068 23700.780448595084 22734.02362104088 21158.76019961148 21383.919290644073 22884.603423494635 0.9788360772980612 1.0073802744282911 0.9418288825454872 0.9525453403519231 1.0001925381995171 0.938554629545167 1.0356648970487519 0.9934200388065646 0.9245849625643368 0.9344238523570011 1.0 14.4820896706615 -5.740190793594063 24.997650962321902 0.9691587577320163 0.9931081649234859 0.07063590408784648 0.03369140686958631 577.3623201425568 679220.3670349772 0.004965152402473352 0.019188739880020546 1.8189016059607527e-06 5.740190793594063 0.02394940719146954 RTQS(ph)GNFYTDTLGMAEFR ddPTM_A549_PD325901_60min_R1 2 RTQSGNFYTDTLGMAEFR 18 1 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2 E9PP16 PPFIBP2 Liprin-beta-2 1 RT(0.055)QS(0.82)GNFYT(0.125)DTLGMAEFR;RT(0.223)QS(0.679)GNFYT(0.095)DT(0.003)LGMAEFR 99.148 1.7215999999999997e-07 21801000.0 3740.7999999999997 3727.6000000000004 3790.9 3963.7 3807.5 3266.2 4081.4 3943.9 4689.5 5023.1 4260.8 True False 4120.563262168589 4041.7379340133357 4048.1732705335676 4208.528746784165 3540.074335161919 3239.6011501051576 4236.719910427776 3865.235820570304 4492.416623175537 4705.940608752393 3736.748611436572 1.1027135327105833 1.0816189030333279 1.0833410784294826 1.12625418094856 0.947367538808279 0.8669572098562207 1.1337984839175448 1.0343847613244541 1.2022260768161368 1.2593677279626312 1.0 11.867567794799527 -13.28419012844006 15.457622752417965 0.5927845768520632 1.07416320351211 0.0 0.10618147576351768 0.0 0.0 0.0 0.013610490794239772 5.1976839891529156e-14 13.28419012844006 0.4813786266600468 RTQS(ph)IQGK ddPTM_A549_MK2206_60min_R1 1 RTQSIQGK 8 1 Q53HL2 Q53HL2 CDCA8 Borealin 1 RT(0.13)QS(0.87)IQGK 45.598 0.020102000000000002 2821300.0 1603.2 1594.2 1233.0 1032.0 1533.2 1201.4 1186.7 1044.8 2288.4 2292.9 2349.0 True False 1873.7809655232168 1675.3379706212531 1407.8579404820487 1284.8400463282403 1307.6683110177592 1328.5313505752226 1402.3080291063939 1192.9035995658057 1770.0810538238827 1774.9322975117911 1765.6784708980801 1.0612243375036183 0.9488352484521845 0.7973467217765686 0.7276749801874912 0.7406038712997602 0.7524197482565947 0.7942035043294918 0.6756063571183812 1.002493422782441 1.0052409466198022 1.0 10.786006937572942 -8.791009298904559 24.510072175011132 1.0011775294295089 0.808494290486993 0.40519408894077147 0.10262935523795047 119.2372360730016 98833.41952345216 0.018617790126037315 0.019821723018756496 1.6180453924624713e-09 8.791009298904559 -0.19268323894251593 RTQS(ph)IQGK ddPTM_A549_PD325901_60min_R1 1 RTQSIQGK 8 1 Q53HL2 Q53HL2 CDCA8 Borealin 1 RT(0.259)QS(0.741)IQGK 57.347 0.007061700000000001 4258300.0 2456.0 1842.8 1658.6 2042.0 2104.3 1682.0 1790.6 2080.9 2170.1 2203.7 2437.0 True False 2705.3313119883583 1998.0992233071618 1771.1625699720332 2168.12970228152 1956.5012274409019 1668.302349665322 1858.7422628539175 2039.3948170655308 2078.898243726032 2064.558005914206 2137.2644494158208 1.2657915648799603 0.9348862859967109 0.8287053904144364 1.0144414758193052 0.9154230904723433 0.78057834636295 0.8696828618292735 0.95420799125862 0.9726911633673867 0.9659815407861729 1.0 11.061549712199616 -5.259797027069756 24.377206822532788 0.9494571284273386 1.2657917167003212 0.6305549143651988 0.07289380955044801 57.6426414542497 855468.3311588388 0.011115503178823701 0.0974336259447011 5.497977686500252e-06 5.259797027069756 0.31633458827298255 RTQS(ph)LSALPK ddPTM_A549_MK2206_60min_R1 4 RTQSLSALPK 10 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 RT(0.022)QS(0.957)LS(0.021)ALPK;RT(0.013)QS(0.983)LS(0.004)ALPK;RT(0.018)QS(0.981)LS(0.001)ALPK;RT(0.002)QS(0.998)LSALPK 110.9 7.3124e-05 142186700.0 15251.2 14720.699999999999 15845.0 13635.2 21555.7 15631.7 14451.6 14365.6 22281.9 23466.500000000004 23495.4 True False 17825.229703959383 15469.920752806585 18092.05925947937 16975.824612107383 18384.885084663125 17285.836118517327 17077.268655459637 16401.96779280488 17235.085226882715 18165.401351807952 17660.843739948377 1.0093079337789037 0.8759446026813554 1.024416473294285 0.9612125480567217 1.0409969849332275 0.9787661548364877 0.9669565569413476 0.9287193768497055 0.9758925157067888 1.0285692812466416 1.0 14.10826664837738 -6.855392136677618 0.0034830953237227165 1.9463083354974928 2.840767224439897e-08 0.05516774930290147 0.04473574398728371 61460.59295299636 57.467814064584054 15830.129351517353 16282.933952437248 1.395108109912742e-07 6.855392136677618 -1.9463083070898206 RTQS(ph)LSALPK ddPTM_A549_PD325901_60min_R1 2 RTQSLSALPK 10 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 RT(0.073)QS(0.92)LS(0.007)ALPK;RT(0.039)QS(0.96)LS(0.001)ALPK 77.527 0.0011219000000000001 12811000.0 10385.8 12693.7 11515.3 12812.8 14401.3 13588.2 12327.3 16255.3 18170.6 19405.6 23364.0 True False 11440.158770378132 13763.442647544025 12296.797505124174 13604.21755601991 13389.802369787874 13477.542204353353 12796.422147257386 15931.075289463846 17406.952871963607 18180.327104219577 20490.376116598778 0.5583186323803361 0.6717027822829753 0.6001255142975547 0.6639320566204467 0.6534678667484832 0.657749868897502 0.6245088950266414 0.777490622856769 0.8495184652985769 0.8872617564834311 1.0 14.322658845917726 -8.893771323827274 0.6027345045498264 0.9803068222316091 0.6164507321956008 0.8735314997543134 0.04671492974419755 0.11547476575034181 0.09341453034567154 0.013484061197748573 0.012151397965900843 1.2771110899806455e-09 8.893771323827274 -0.3638560900360084 RTQS(ph)SLTVSEVLTR ddPTM_A549_MK2206_60min_R1 4 RTQSSLTVSEVLTR 14 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 RT(0.083)QS(0.889)S(0.029)LTVSEVLTR;RT(0.085)QS(0.835)S(0.073)LT(0.008)VSEVLTR;RT(0.061)QS(0.915)S(0.024)LTVSEVLTR;RT(0.029)QS(0.941)S(0.029)LTVSEVLTR 128.79 4.7149e-09 70956600.0 5197.3099999999995 6286.139999999999 5547.209999999999 5217.4400000000005 7399.8 5637.959999999999 4466.74 5756.3 8209.87 8367.47 9372.89 True False 6074.488865970227 6606.0776757251815 6333.887790771632 6495.713034219785 6311.299222455783 6234.565185025039 5278.288839580934 6572.273152929415 6350.347553468402 6477.252715539702 7045.342734395871 0.8621991995242666 0.937651711885333 0.899017695739504 0.9219868044896163 0.8958115254838583 0.8849200699048241 0.7491883700436528 0.9328535744390551 0.9013539571986395 0.9193665886426344 1.0 12.782454175609498 -10.267592917320487 0.7301844168475916 0.9987869513262679 0.8865228557039272 0.17005238003028378 0.05338616790329311 0.5082858369558183 0.5080248289745155 0.03048069188613055 0.01006589548037876 5.40016565839967e-11 10.267592917320487 -0.11226409562234074 RTQS(ph)SLTVSEVLTR ddPTM_A549_PD325901_60min_R1 4 RTQSSLTVSEVLTR 14 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 RT(0.003)QS(0.992)S(0.005)LTVSEVLTR;RT(0.029)QS(0.939)S(0.029)LT(0.002)VSEVLTR;RT(0.003)QS(0.992)S(0.005)LTVSEVLTR;RT(0.001)QS(0.956)S(0.04)LT(0.003)VSEVLTR 171.25 5.8785e-23 129758000.0 8700.039999999999 7320.6 9186.279999999999 9144.52 9293.75 9518.31 8070.04 10128.779999999999 9603.32 10778.880000000001 10635.07 True False 9583.26165616906 7937.532653647936 9809.716202389176 9709.356231688254 8640.989061696935 9440.796039145618 8377.14978829533 9926.753537025801 9199.725856844881 10098.299677264831 9327.023811263321 1.0274726268626337 0.8510252374463294 1.0517520273233305 1.0409918992554976 0.926446553214764 1.0121981277398375 0.8981589366351865 1.0643002245837783 0.9863517069330611 1.082692601799742 1.0 13.18720108517015 -2.0000005455088044 0.14392823800378388 1.0019402200167438 0.880899283167588 0.030987195362025877 0.06902437399374314 261.1675397044808 2.3757470045426436 0.12047503996826858 6.595017800769669 0.00999998743920348 2.0000005455088044 -0.12104093684915573 RTREEEEDS(ph)TIEASDQVSDDTVEMPLPK ddPTM_A549_MK2206_60min_R1 3 RTREEEEDSTIEASDQVSDDTVEMPLPK 28 2 P12270 P12270 TPR Nucleoprotein TPR 1 RT(0.136)REEEEDS(0.725)T(0.136)IEAS(0.004)DQVSDDTVEMPLPK;RT(0.1)REEEEDS(0.745)T(0.153)IEAS(0.001)DQVSDDTVEMPLPK;RT(0.072)REEEEDS(0.43)T(0.43)IEAS(0.065)DQVS(0.002)DDT(0.002)VEMPLPK 131.9 1.5242000000000002e-27 20339700.0 2323.17 3205.8900000000003 2655.14 2786.41 3760.6899999999996 3098.8500000000004 3020.14 3009.62 4912.8099999999995 4314.74 4315.4 True False 2715.264299946715 3369.0561075366754 3031.6787770409633 3469.0805750866994 3207.4974827559176 3426.768250149852 3568.860344674629 3436.242851574696 3800.066379145477 3340.0372372829265 3243.7670810189743 0.837071291534829 1.0386245446693243 0.9346166667702334 1.069460441653211 0.9888186798382382 1.0564162483187267 1.1002209022830123 1.0593371119899455 1.1714979171537037 1.0296785046088175 1.0 11.66345451509183 -3.735295032739496 0.49483178226779856 1.0794184183021183 5.930421423106185e-10 0.5152121430035954 0.058208486078958635 10.96633530085902 0.5630662552177479 0.013289895004257892 9.696047311545414 0.00018395219197833446 3.735295032739496 -1.0794184177090762 RTS(ph)DLER ddPTM_A549_PD325901_60min_R1 1 RTSDLER 7 1 Q8TF30 Q8TF30 WHAMM WASP homolog-associated protein with actin, membranes and microtubules 1 RT(0.199)S(0.801)DLER 50.805 0.021455000000000002 3829600.0 321.97 357.92 213.03 217.67 249.35 227.73 275.87 221.9 134.9 267.47 337.87 True False 354.65615737821327 388.08317452034936 227.48749685345592 231.11498153556244 231.836516210801 225.87544238364092 286.36838381185646 217.47403042281752 129.23062212738668 250.58189855328428 296.31413193439585 1.1968924838749655 1.3097018761368804 0.7677240885150284 0.7799661124050994 0.7824011453565426 0.7622837321631689 0.9664351205336997 0.7339306735156541 0.43612709688783396 0.8456630026972972 1.0 8.210983623314842 -5.76638202134192 24.777441777781164 0.7542254219405106 1.253297264557982 0.6090420594372009 0.14253036881563919 62.577821452369044 313711.26279819786 0.028163274658119426 0.09175789008560548 1.7124503107511152e-06 5.76638202134192 0.4990718426174715 RTS(ph)EEDT(ph)PK ddPTM_A549_PD325901_60min_R1 2 RTSEEDTPK 9 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 2 RT(0.447)S(0.553)EEDT(1)PK;RT(0.465)S(0.535)EEDT(1)PK 82.36200000000001 0.0006364 9418700.0 2369.5 2079.36 2093.66 1507.29 2436.1000000000004 1740.41 1424.35 1652.1100000000001 1923.9 2136.09 2809.7 True False 2610.049895666293 2254.5949647145553 2235.7483578003394 1600.39187999604 2264.9967400887617 1726.236677991096 1478.5544186842271 1619.1573699947771 1843.04517354247 2001.2169128525998 2464.1247121557767 1.0592198855807309 0.9149678803156391 0.9073194821557392 0.6494768191322237 0.9191891664067583 0.7005476100602359 0.6000323000659701 0.6570922981321967 0.7479512560588113 0.8121410831929058 1.0 11.266859558980446 -5.445284892809614 1.7094695257222212 0.8203353560386949 1.0883310720297694 0.28418070082665925 0.12481162843262406 0.9033835995577945 3.363099120029263 0.02211445439039562 0.34944011756013454 3.5868656267714416e-06 5.445284892809614 0.2679957159910745 RTS(ph)EEDT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 RTSEEDTPKK 10 2 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 2 RT(0.464)S(0.536)EEDT(1)PKK 48.177 0.015648 5250100.0 2886.9 2463.0 2179.0 2663.8 2796.0 2354.5 1973.8 2122.9 2512.7 3279.6 3581.5 True False 3179.975962776544 2670.565653899252 2326.8800433914507 2828.336876071261 2599.618605676356 2335.325732631987 2048.914039104802 2080.557094117167 2407.0999571496254 3072.5254962999607 3140.998204999082 1.0124093537256489 0.8502283285768488 0.7408090968304551 0.9004579727456697 0.8276409077658532 0.7434979519934714 0.6523130245168035 0.6623872279856253 0.7663487210271516 0.9782003349794524 1.0 11.617007403188525 -10.642224099152026 1.0118275543343358 0.9950096453255516 0.7905304582084572 0.35951490135959174 0.09910070342591866 0.45262440736787724 0.8541635793629585 0.06250072332849736 0.01849937202738402 2.2791657022262622e-11 10.642224099152026 -0.20447918711709434 RTS(ph)EEDTPK ddPTM_A549_MK2206_60min_R1 3 RTSEEDTPK 9 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.153)S(0.846)EEDTPK;RT(0.214)S(0.786)EEDTPK;RT(0.285)S(0.714)EEDT(0.001)PK 101.72 0.00030199 49483600.0 6526.9 6872.799999999999 6085.4 5002.9 2650.82 1850.5099999999998 1646.02 1908.56 2113.12 8654.9 7888.4 True False 7628.481152615692 7222.59616389772 6948.4012254740155 6228.610724588715 2260.887889520019 2046.3297399308772 1945.0805275720118 2179.104224719864 1634.50169395924 6699.752078910898 5929.492571235598 1.286531867772634 1.2180799751626408 1.1718374113800594 1.0504458264783332 0.38129534059756676 0.3451104315161423 0.32803490420204584 0.36750264858933424 0.2756562512428681 1.1299031069558776 1.0 12.53369293306151 -6.626194061155069 4.7755406473502715 0.5635321223263785 1.2084214170259193 0.5718944686908143 0.26634909634033993 0.14079973205181345 5.3809866913291 0.044379576257900205 0.09441663279946322 2.3648627405967168e-07 6.626194061155069 0.6448892946995408 RTS(ph)EEDTPK ddPTM_A549_PD325901_60min_R1 2 RTSEEDTPK 9 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.196)S(0.801)EEDT(0.003)PK;RT(0.052)S(0.923)EEDT(0.026)PK 101.72 0.00058032 33103000.0 6916.0 6611.4 7090.6 7177.2 8155.2 5763.7 6790.0 7043.200000000001 6831.3 8456.0 7604.0 True False 7618.107228709891 7168.56588071032 7571.810755241583 7620.519343396146 7582.40688591267 5716.762338148647 7048.397165630568 6902.717850716486 6544.204217485666 7922.086716890008 6668.75620572749 1.1423580340464459 1.0749479602438556 1.1354157389557142 1.1427197378802407 1.1370046605393203 0.8572456634775134 1.0569283008992025 1.035083250574981 0.9813230556944259 1.187940670268631 1.0 12.703201993124827 -7.206412538984914 24.99896169958697 0.9917415483672153 1.1250235186221003 0.28453807168530953 0.07761242463778743 141.0739725211717 64090.52474670962 0.006844437723939298 0.011854910456456057 6.217094389903303e-08 7.206412538984914 0.13328197025488497 RTS(ph)EEDTPKK ddPTM_A549_PD325901_60min_R1 2 RTSEEDTPKK 10 2 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.15)S(0.85)EEDTPKK;RT(0.286)S(0.713)EEDTPKK 79.633 0.00040916 22280000.0 4514.799999999999 4102.7 3661.3999999999996 3950.1000000000004 5057.4 4285.0 3755.3 3574.0 4379.7 4911.1 5075.6 True False 4973.139172379905 4448.448927426904 3909.884621786806 4194.088705672006 4702.185671082837 4250.104380687221 3898.2099964790114 3502.7137662512396 4195.6364398170135 4601.012307866428 4451.333376879335 1.1172246047017913 0.9993520032744766 0.8783625693135302 0.9422095247811625 1.0563544162983731 0.9547935463029308 0.875739843869412 0.7868909087880679 0.9425572260234569 1.0336256394015644 1.0 12.120021838285258 -7.495383479600948 24.48857343483667 0.9472031834002355 0.9905790714233167 0.11999425269821917 0.08337187871764669 1517.9464381006117 1351955.2460797245 0.013157953181328973 0.021000818666220486 3.196071749871932e-08 7.495383479600948 0.04337588802308123 RTS(ph)FLEGTLR ddPTM_A549_MK2206_60min_R1 1 RTSFLEGTLR 10 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 RT(0.152)S(0.848)FLEGTLR 102.87 0.0001619 4947500.0 297.05 434.42 378.47 251.94 377.26 177.13 334.22 361.78 487.07 507.51 448.38 True False 347.1847778247701 456.53012244215546 432.1427370107389 313.6653113100162 321.7655537533 195.87377903062193 394.9434477862468 413.0634229047831 376.7494226909625 392.863138518997 337.03487134154176 1.0301153006596244 1.35454862763895 1.2821899861300035 0.9306612994124175 0.9546951402166092 0.5811676941645866 1.1718177594330352 1.2255806684353328 1.1178351402967295 1.1656453735936434 1.0 8.39675405746917 -6.252294324080321 24.512377406884998 1.0293939547196749 1.2355110476346156 0.19819936865763033 0.18110649761806835 634.8724295230863 1701703.0054201493 0.02513851810315665 0.06547212625830431 5.593783787910808e-07 6.252294324080321 0.20611709291494074 RTS(ph)FLEGTLR ddPTM_A549_PD325901_60min_R1 1 RTSFLEGTLR 10 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 RT(0.198)S(0.802)FLEGTLR 108.97 9.4433e-05 11965000.0 582.15 552.55 477.38 437.26 769.74 585.97 537.04 551.2 502.66 757.89 538.55 True False 641.2494394438205 599.1153276743935 509.7778775191419 464.2685571104886 715.6761178588405 581.1980545977344 557.4773510795638 540.2058835919653 481.5349482472361 710.0366960576833 472.311764149729 1.3576825480902823 1.2684742857356948 1.0793249633255708 0.9829705553624732 1.5152621047820476 1.230539018319872 1.180316463391829 1.1437485250117823 1.0195277458610648 1.5033220638404263 1.0 8.883595659773272 -8.547106840984819 1.7204944409378307 1.0063420044144895 1.2307862807323977 0.0 0.19807731186188796 0.2798958708078265 1.6192670912605 0.024016381321748922 0.02794386090109329 2.837220956548878e-09 8.547106840984819 0.2244442763179082 RTS(ph)FSFQK ddPTM_A549_MK2206_60min_R1 2 RTSFSFQK 8 1 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 RT(0.497)S(0.503)FSFQK;RT(0.014)S(0.983)FS(0.003)FQK 90.104 0.0011057 59855000.0 6831.1 8717.2 8098.3 7014.7 9831.599999999999 7651.799999999999 7336.1 7119.1 10883.8 10540.6 10433.400000000001 True False 7984.022675639746 9160.868245828364 9246.760713224476 8733.301814901848 8385.384663841767 8461.508397146235 8668.974409983497 8128.254226329379 8418.636677857186 8159.471139235367 7842.498832808865 1.0180457588643583 1.1681057837718942 1.179057964859481 1.1135866260338267 1.069223578174058 1.0789301442733739 1.1053842142401216 1.036436778584533 1.0734635550901284 1.0404172589864418 1.0 12.937097694016144 -9.870257054544954 0.21892539351531132 0.9590187916530921 1.1352836884418744 0.3314211976249374 0.044927563949148 2.7605438466501697 0.2971626548622119 0.15313797783176497 0.05806179832489476 1.3481646812475722e-10 9.870257054544954 0.17626489678878232 RTS(ph)FSFQK ddPTM_A549_PD325901_60min_R1 5 RTSFSFQK 8 1 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 RT(0.287)S(0.684)FS(0.029)FQK;RT(0.137)S(0.863)FSFQK;RT(0.229)S(0.771)FSFQK;RT(0.17)S(0.795)FS(0.035)FQK;RT(0.314)S(0.674)FS(0.013)FQK 86.189 0.001187 148266000.0 16235.5 16896.199999999997 15636.1 17784.9 20197.7 19275.7 17732.0 18647.4 19109.8 19326.300000000003 19721.3 True False 17883.71600805661 18320.102071219044 16697.259773507605 18883.432880561504 18779.08323028231 19118.72509003796 18406.800963322705 18275.462978397707 18306.681562119604 18106.03411975302 17295.70512362092 1.0339975086434978 1.0592284003616075 0.9653991932774102 1.0917989608167065 1.0857656913123206 1.1054030438994547 1.0642411414718416 1.0566474652391433 1.0584524557555033 1.0468514576503405 1.0 14.078126211277883 -10.523219843862298 0.7947212484208438 0.999303219463854 1.0586379102306398 0.06492246279569858 0.03733099801666169 0.7227720424876425 0.805576408781652 0.025535802540488192 0.006910585014551386 2.9976446995274e-11 10.523219843862298 0.05933469076678577 RTS(ph)FSTSDVSK ddPTM_A549_MK2206_60min_R1 3 RTSFSTSDVSK 11 1 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 RT(0.473)S(0.527)FSTSDVSK;RT(0.274)S(0.723)FS(0.003)TSDVSK;RT(0.067)S(0.933)FSTSDVSK 120.59 9.4763e-06 104086100.0 11258.7 12991.0 13215.3 12498.9 20711.699999999997 17132.6 17399.2 18010.0 26974.199999999997 25975.7 24817.8 True False 13158.893311212718 13652.186410952643 15089.428256976818 15561.131061096947 17665.03636662309 18945.560360300544 20560.409421107237 20562.9726533118 20864.58676894607 20107.771329092844 18654.855323565087 0.7053870471238772 0.7318301950970909 0.8088740435266539 0.834159836203066 0.9469404109668091 1.0155833444802027 1.1021478893559162 1.1022852923086652 1.1184534217528674 1.0778840671946897 1.0 14.187263551026332 -6.721550615555724 1.1125059230947356 1.0650815751244842 0.724543910260632 0.941429805953038 0.0356467133518616 0.1190703516846759 0.2844792678318762 0.00803595998185165 0.025542082169533846 1.8986695456801374e-07 6.721550615555724 -0.3405376648638522 RTS(ph)FSTSDVSK ddPTM_A549_PD325901_60min_R1 4 RTSFSTSDVSK 11 1 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 RT(0.27)S(0.709)FS(0.021)TSDVSK;RT(0.025)S(0.975)FSTSDVSK;RT(0.069)S(0.929)FS(0.002)TSDVSK;RT(0.004)S(0.573)FS(0.369)T(0.043)S(0.01)DVSK 146.43 1.5423e-11 205659000.0 25227.6 25438.7 27985.3 27080.300000000003 28457.399999999998 30400.800000000003 29451.600000000002 28348.4 30464.6 31022.8 31319.5 True False 27788.687380422467 27582.50852612542 29884.550747279816 28752.98862717643 26458.65039670042 30153.2259641531 30572.396754533926 27782.968923110402 29184.278805500242 29064.015113615846 27467.400050668344 1.0116970419173803 1.0041907306568782 1.0880007096468038 1.0468041596269249 0.9632746582455161 1.097782313161431 1.1130429781536615 1.0114888512148925 1.0625060526902737 1.0581276371262758 1.0 14.745432736940808 RTS(ph)LGEVSK ddPTM_A549_MK2206_60min_R1 2 RTSLGEVSK 9 1 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 RT(0.198)S(0.802)LGEVSK;RT(0.221)S(0.779)LGEVSK 99.844 0.00033232 77373000.0 6091.4 5676.3 5327.2 4552.0 7397.1 5805.3 6213.3 6790.4 7352.3 7611.5 7058.9 True False 7119.479399568438 5965.199424562421 6082.677064506055 5667.240204347044 6308.996388879115 6419.612992753741 7342.1761837421045 7752.95999472784 5687.01578921051 5892.056863583664 5305.980314270948 1.3417839829559692 1.1242407757372261 1.1463813855747083 1.068085418467244 1.189035016189272 1.2098825499762165 1.383754885783238 1.4611739085943276 1.071812455450453 1.1104558469122863 1.0 12.37340360769263 -8.975311246707404 24.35837737900009 1.0316817414974335 1.2321056710223235 0.3256484009699332 0.11399491486859736 100.18571453205669 98846.31840718462 0.02114147531180464 0.021912179635526205 1.0584948596224835e-09 8.975311246707404 0.20042392952488997 RTS(ph)LGEVSK ddPTM_A549_PD325901_60min_R1 2 RTSLGEVSK 9 1 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 RT(0.296)S(0.704)LGEVSK;RT(0.177)S(0.823)LGEVSK 110.92 0.00014287 89538000.0 8515.2 7770.9 8817.9 6686.299999999999 9451.1 7715.9 8801.9 7966.099999999999 9010.7 9962.6 10329.5 True False 9379.656835441077 8425.781014975919 9416.335720340277 7099.297565310932 8787.287340524968 7653.064268598491 9136.86112108449 7807.2098862154435 8632.011614553323 9333.559735772047 9059.036984095494 1.0353922665188895 0.9300967674344026 1.0394411389281306 0.7836702265124671 0.970002369562281 0.8447988767497694 1.0085907737351805 0.8618145504783984 0.952861946552169 1.0303037455480666 1.0 13.145141978188175 -9.84771488868587 1.0049332529192923 0.9931406372978111 0.9333291616874096 0.12016136871952277 0.0774436180660018 0.7952196248045722 1.6438938780718817 0.02336411667022965 0.01373397970670871 1.4199894289681818e-10 9.84771488868587 -0.059811475610401454 RTS(ph)LGEVSKGDTMENLDGK ddPTM_A549_MK2206_60min_R1 1 RTSLGEVSKGDTMENLDGK 19 2 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 RT(0.344)S(0.647)LGEVS(0.007)KGDT(0.002)MENLDGK 49.765 0.0082249 10082000.0 3349.2 3963.5 3799.5 3101.4 3853.7 3173.5 3033.9 3138.6 5363.5 5023.2 4976.7 True False 3914.4630799216307 4165.225220522728 4338.3262326533195 3861.2431392271374 3286.8258349655193 3509.3176636011917 3585.120358562305 3583.506161559379 4148.675813749519 3888.4556312360864 3740.8480400674644 1.046410610106214 1.1134441110437647 1.159717311739581 1.0321839053257833 0.8786312086887772 0.9381075162673282 0.9583710218011553 0.9579395161677704 1.1090201391005179 1.0394583232431864 1.0 11.869149646890357 -6.4094472467032615 7.326331602658649 1.0172615397363778 1.1065709866842615 0.33180718999358005 0.06619170043052161 0.3396782904800453 19.762743556198615 0.01154687180587127 0.026934744489719876 3.8954062192214085e-07 6.4094472467032615 0.08930944694788367 RTS(ph)LGEVSKGDTMENLDGK ddPTM_A549_PD325901_60min_R1 1 RTSLGEVSKGDTMENLDGK 19 2 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 RT(0.132)S(0.868)LGEVSKGDTMENLDGK 98.01899999999999 5.7055e-07 26588000.0 2716.4 3320.7 3933.9 3145.2 4440.4 4044.4 4659.8 3756.3 4428.3 4640.4 4880.7 True False 2992.1669282920125 3600.547042997663 4200.878110462426 3339.4718607325353 4128.521622548387 4011.463747316547 4837.131238940404 3681.3776497396557 4242.193950828066 4347.40435206438 4280.404841306438 0.6990383011011552 0.8411697436307746 0.9814207455153378 0.7801766385520867 0.9645166229856673 0.9371692389012889 1.1300639584979175 0.86005361320357 0.9910730662413908 1.0156526107323747 1.0 12.063531538046433 -3.9372157867795727 0.4236920683035814 0.9949080695098053 1.2902381260226704e-15 0.5092707024456121 0.08135818270010511 7.6080582520327935 0.39087126646310777 0.016161924805228184 4.910719609547445 0.0001155537950368147 3.9372157867795727 -0.9949080695098039 RTS(ph)LPCIPR ddPTM_A549_MK2206_60min_R1 1 RTSLPCIPR 9 1 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 RT(0.256)S(0.744)LPCIPR 71.221 0.0013390000000000001 6163100.0 572.85 539.14 430.36 275.97 575.34 506.0 438.56 549.07 916.28 629.57 700.67 True False 669.5330751621597 566.5799231468712 491.39151927482084 343.5826623887641 490.70824814828916 559.544584144384 518.2406751874106 626.9023539563527 708.7440429984913 487.3496997446454 526.6743014917658 1.2712469039513736 1.0757690693129998 0.9330083466821731 0.6523626867982579 0.9317110152486926 1.062411024345626 0.9839870176303123 1.190303669992438 1.3456970294374084 0.9253341170515887 1.0 9.040767256225218 -8.255338464696566 20.75362080259637 1.1698364410774638 0.9764133937673177 0.0802991440352846 0.1740204082413411 61.801341227416096 210228.32288958863 0.03054263117490145 0.03881370323627351 5.554711855314642e-09 8.255338464696566 -0.19342304731014603 RTS(ph)LPCIPR ddPTM_A549_PD325901_60min_R1 2 RTSLPCIPR 9 1 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 RT(0.125)S(0.875)LPCIPR;RT(0.021)S(0.979)LPCIPR 94.465 0.00039623 22982000.0 1088.25 870.17 905.5999999999999 1083.7800000000002 1145.97 1089.4 1219.4 1085.8400000000001 1133.1 1054.74 818.24 True False 1198.7283388726921 943.5022797618806 967.0594618151895 1150.7226291570357 1065.4810205818792 1080.5282875894184 1265.8049342812837 1064.1820693749996 1085.4797474613924 988.143536396945 717.6016672507182 1.6704648185465771 1.3147994532630267 1.3476271111802125 1.6035673851841712 1.4847805812157036 1.5057494107129765 1.763938117829139 1.482970452747279 1.5126494223739642 1.377008417751772 1.0 9.487039431943199 -10.542926375747669 0.7467089397760076 0.982717451665272 1.5188625140788325 0.29568255731383664 0.16310522163225397 0.31544539564806284 0.30088957491400387 0.09887286387164212 0.024619914868775575 2.8646635640036995e-11 10.542926375747669 0.5361450624135605 RTS(ph)MGGTQQQFVEGVR ddPTM_A549_PD325901_60min_R1 2 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RT(0.117)S(0.883)MGGTQQQFVEGVR;RT(0.31)S(0.69)MGGTQQQFVEGVR 210.02 1.6472e-46 107698000.0 5195.9 5312.799999999999 4983.7 5054.5 6220.7 5775.1 5479.8 6050.0 6221.1 6503.1 7819.1 True False 5723.383942980587 5760.528301273218 5321.923851422659 5366.7049853976205 5783.779492249967 5728.0695003283 5688.336787661616 5929.328003866818 5959.64880145801 6092.493156174013 6857.400269358732 0.8346288269848666 0.8400455092308492 0.7760847613348284 0.7826150982286887 0.8434361806315903 0.8353121117813879 0.8295179753585479 0.8646612084700865 0.8690828254678103 0.88845523330429 1.0 12.743446020044376 -10.27646777960349 0.3492489949280684 1.0442329460057103 0.8067699702330003 0.5358069165590006 0.03873682124887724 0.46264934383807027 0.0905101209714959 0.04194873604987727 0.009287058893423744 5.290932492899716e-11 10.27646777960349 -0.23746297577270992 RTS(ph)NERPGSGQGQGR ddPTM_A549_MK2206_60min_R1 2 RTSNERPGSGQGQGR 15 2 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RT(0.216)S(0.784)NERPGSGQGQGR;RT(0.276)S(0.724)NERPGSGQGQGR 110.44 5.6165e-07 204040000.0 1171.1599999999999 1182.29 938.06 915.18 1300.5500000000002 1199.06 1013.0999999999999 959.71 1445.62 1821.45 2036.23 True False 1368.8231758870822 1242.4635110311128 1071.091013502506 1139.399141083991 1109.240817828168 1325.9437333283884 1197.1671562211914 1095.7518314886102 1118.189378180773 1409.983179948035 1530.5778939109389 0.8943178791047738 0.8117610452718385 0.6997951674093829 0.7444241456882627 0.7247202656206091 0.8663026812312907 0.7821667626220479 0.7159072634250195 0.7305667895957721 0.9212096852811851 1.0 10.579860752786997 -10.76034113669184 0.9416573485737708 1.004157059139399 0.7705507482909889 0.5524636433980579 0.06326408598700628 0.2867696224264351 0.43878428633334804 0.046371165935080526 0.011004802039544256 1.7364363286705137e-11 10.76034113669184 -0.23360631084841 RTS(ph)NERPGSGQGQGR ddPTM_A549_PD325901_60min_R1 1 RTSNERPGSGQGQGR 15 2 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RT(0.155)S(0.845)NERPGS(0.001)GQGQGR 53.778999999999996 0.005626600000000001 235950000.0 779.78 569.62 693.81 720.91 795.11 906.5 814.01 701.38 601.95 695.15 847.92 True False 858.9426915563042 617.6238764815643 740.8961188184587 765.4389733945989 739.2642165805893 899.1177645491174 844.9875959933634 687.3904256780345 576.6521348375121 651.2581103649591 743.6312154077394 1.1550654057540315 0.8305513051155547 0.9963219717884206 1.0293260389491612 0.9941274670338366 1.2090909390565636 1.1362992549069493 0.9243700525685065 0.7754544495840304 0.8757810281106457 1.0 9.538443521313358 -8.445316274227135 7.6841219063482 0.8917068182734348 1.0423115132324863 0.33531468942586873 0.10631146925817027 0.321534658883814 28.65263992360009 0.02032238240388665 0.02454800619212347 3.5866064550207522e-09 8.445316274227135 0.1506046949590515 RTS(ph)PQVLGSILK ddPTM_A549_MK2206_60min_R1 2 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.089)S(0.911)PQVLGSILK;RT(0.1)S(0.9)PQVLGSILK 139.86 4.0398e-09 14018600.0 7536.8 8979.7 8299.1 7273.9 12018.0 8776.3 8414.0 7873.0 12610.900000000001 12678.3 12611.3 True False 8808.827582931248 9436.728374600218 9476.037172631437 9056.005826537783 10250.16812014833 9705.002240763552 9942.714887419901 8989.021860051294 9754.551285469148 9814.263224538234 9479.56615582672 0.9292437478815214 0.9954810398996824 0.9996277273519407 0.955318595563723 1.0812908472449396 1.0237812660654586 1.0488575873599977 0.948252452938059 1.0290081977510548 1.0353072137700932 1.0 13.2106053185578 -3.760414859739298 0.8481851066273416 1.0140576701196735 1.0735838891877221e-13 0.3192804793676596 0.03618330124143423 21.256739853432304 1.4414906599406543 0.005200518724887411 35.124396957973815 0.00017361415873871702 3.760414859739298 -1.0140576701195663 RTS(ph)PQVLGSILK ddPTM_A549_PD325901_60min_R1 2 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.2)S(0.8)PQVLGSILK;RT(0.389)S(0.611)PQVLGSILK 106.14 0.00011405 142516000.0 6366.0 7278.6 7695.0 6853.0 8647.5 7162.1 8988.0 8351.1 7377.6 7352.900000000001 8794.3 True False 7012.271633598496 7891.993166248924 8217.22897379404 7276.294245707763 8040.129432255474 7103.7742321866845 9330.043258422324 8184.530759188783 7067.545128295094 6888.636639146235 7712.656851660871 0.9091901491881423 1.0232522097167378 1.0654213109487052 0.9434225307380115 1.042459114529915 0.9210541022134198 1.2097054799492548 1.061181758323177 0.9163567450525358 0.8931600059015735 1.0 12.913012209191535 -8.757410224323682 24.990052666693444 0.9605017967073434 1.0244124887050772 0.1565841616700766 0.08326112315440172 169.53827778818436 1051526.8624599318 0.013859576113491421 0.015435878527266396 1.7481946050995041e-09 8.757410224323682 0.0639106919977338 RTS(ph)PSSLPGR ddPTM_A549_MK2206_60min_R1 2 RTSPSSLPGR 10 1 Q5SNT2;H0Y4R5 Q5SNT2 TMEM201 Transmembrane protein 201 1 RT(0.224)S(0.775)PSSLPGR;RT(0.142)S(0.856)PS(0.002)SLPGR 82.912 0.00059117 91364000.0 3287.0 3805.8 3042.6 2140.6 4062.9 2973.7 2937.9 3008.3999999999996 4652.0 4600.1 5013.0 True False 3841.7652405656286 3999.4989641138895 3474.0864312333183 2665.0470960951866 3465.2527920910866 3288.3749602176954 3471.678401206434 3434.8499128386024 3598.3294277174896 3560.9342150917996 3768.13374823843 1.0195405729325877 1.061400478680891 0.9219647346269021 0.7072591564301752 0.9196204337786742 0.8726800002136289 0.9213256835242151 0.9115520154889314 0.9549367586539829 0.9450126914302088 1.0 11.879634458343089 -9.268148566409437 1.038741212688649 0.9892936525465806 0.9132116300134422 0.052697106282550865 0.0853130639463205 0.7413094530694422 1.678178585992294 0.022932132297155225 0.018904193010758474 5.393260946169519e-10 9.268148566409437 -0.07608202253313845 RTS(ph)PSSLPGR ddPTM_A549_PD325901_60min_R1 2 RTSPSSLPGR 10 1 Q5SNT2;H0Y4R5 Q5SNT2 TMEM201 Transmembrane protein 201 1 RT(0.248)S(0.745)PS(0.005)S(0.002)LPGR;RT(0.205)S(0.793)PS(0.001)SLPGR 65.241 0.0045479 46717000.0 7446.5 7449.799999999999 7096.1 6986.900000000001 6656.8 7844.0 6008.8 7451.2 6925.0 7652.299999999999 8283.8 True False 8202.463198176434 8077.62079107537 7577.684018315773 7418.464944598801 6189.2493327132925 7780.1210646699155 6237.468172141526 7302.579970646679 6633.96633233619 7169.132472050313 7264.945115334742 1.129046822509752 1.1118626036176438 1.043047662166216 1.021131588308907 0.8519333917126385 1.0709125727939428 0.858570584239593 1.0051803358063225 0.9131474810915376 0.9868116493981228 1.0 12.82673618339653 -6.0855026596855675 1.6786733771158953 0.9564795184074015 1.1263603102722395 0.49837050196927923 0.06268214712137082 0.22950565247852184 1.1976675758925122 0.008508502857110314 0.03728208190354777 8.212915231047502e-07 6.0855026596855675 0.16988079186483795 RTS(ph)SEELR ddPTM_A549_MK2206_60min_R1 3 RTSSEELR 8 1 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 RT(0.019)S(0.979)S(0.002)EELR;RT(0.072)S(0.856)S(0.072)EELR;RT(0.485)S(0.51)S(0.005)EELR 140.78 0.00045394 56751700.0 4097.8 3567.2 3563.76 2841.63 4634.43 3499.5899999999997 3259.0200000000004 3604.7999999999997 4788.5 4012.6 4402.3 True False 4789.408458408828 3748.7552432568887 4069.1547558575076 3537.829477565618 3952.711486192296 3869.914290960166 3851.141748561828 4115.791439236998 3703.912395663198 3106.150873128269 3309.087412700986 1.447350239230929 1.1328667924783018 1.2296909233159632 1.0691254223102935 1.1945019859617316 1.1694808290970515 1.1638078020484806 1.2437844414262702 1.1193153681727444 0.9386729589572631 1.0 11.69221768698179 -14.20494119361933 0.03576615623472526 2.236890021856057e-15 1.846111889710773 0.5414009579800756 0.0868047276145872 377.64224315903647 1.1940049788472185 48.28514967271316 19.36106576739874 6.238192990737011e-15 14.20494119361933 1.8461118897107707 RTS(ph)SEELR ddPTM_A549_PD325901_60min_R1 4 RTSSEELR 8 1 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 RT(0.429)S(0.56)S(0.011)EELR;RT(0.185)S(0.584)S(0.231)EELR;RT(0.067)S(0.921)S(0.013)EELR;RT(0.218)S(0.696)S(0.086)EELR 143.24 0.00040607 44501200.0 4191.38 4301.5 3559.04 3031.44 3779.3500000000004 3485.3 3606.28 3804.69 3993.83 4993.9 5800.900000000001 True False 4616.885812069125 4664.002501115562 3800.577856646124 3218.6851639002402 3513.9014940496922 3456.9168723475336 3743.5189588321346 3728.8024732284357 3825.9832140179433 4678.584301735696 5087.426074934848 0.9075091694827725 0.916770569717869 0.7470531857693473 0.6326745817021941 0.690703204782134 0.6795021335797601 0.7358375146276845 0.7329447972914651 0.7520469403709106 0.9196368129625573 1.0 12.31272021048328 -10.533114823420867 0.7715914721854366 1.0055633345159722 0.7500243537543351 0.44898046576795037 0.08581861969586332 0.45564018091175434 0.471783144165924 0.06877057328826816 0.017880069808349712 2.930118446771016e-11 10.533114823420867 -0.25553898076163717 RTS(ph)SIADEGTYTLDSILR ddPTM_A549_MK2206_60min_R1 1 RTSSIADEGTYTLDSILR 18 1 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 RT(0.082)S(0.459)S(0.459)IADEGTYTLDSILR 127.28 9.0004e-13 4288900.0 600.68 399.32 393.23 353.45 549.7 403.49 634.57 537.7 706.98 953.21 655.95 True False 702.0600987839854 419.6436823663771 448.99592695519533 440.0452658669736 468.83985818318706 446.18704398501455 749.8631549928749 613.9206216371881 546.8501588150715 737.8791989669036 493.05951170097734 1.4238851135068646 0.8511014845219652 0.9106323198313939 0.8924790120139595 0.9508788433383298 0.9049354761370282 1.5208370129722588 1.2451247913649592 1.109095648370163 1.4965317197133812 1.0 8.945617978475747 RTS(ph)SPPRK ddPTM_A549_PD325901_60min_R1 1 RTSSPPRK 8 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.178)S(0.731)S(0.092)PPRK 67.704 0.0016194000000000002 28529000.0 2985.2 2123.1 1885.3 1811.7 1730.2 1279.8 783.84 1269.1 1625.2 2238.2 3148.5 True False 3288.2553064119106 2302.0210880200984 2013.247795229876 1923.6045943307686 1608.6767208659624 1269.3777331163371 813.6694601337059 1243.7868049103106 1556.8984957852388 2096.879670026398 2761.254459985929 1.1908555890313228 0.8336866889232039 0.7291062176283947 0.6966415526733349 0.5825890891903385 0.4597105234273866 0.2946738418804953 0.4504426603684504 0.5638373856327507 0.7593938553700275 1.0 11.431108128489585 -5.177960456788083 1.6315743361549746 0.6862446075728569 1.4497539179069125 0.41562502259984757 0.18839143278024487 1.3783156823060314 2.947693951232434 0.036166687594442255 1.7605049915648405 6.638035080287177e-06 5.177960456788083 0.7635093103340557 RTS(ph)STLDSEGTFNSYR ddPTM_A549_PD325901_60min_R1 1 RTSSTLDSEGTFNSYR 16 1 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 RT(0.257)S(0.625)S(0.106)T(0.011)LDSEGTFNSYR 94.064 2.9748000000000003e-06 32012000.0 3440.5 3922.7 3821.7 3729.6 4752.4 3828.4 3469.8 4003.3 5023.1 4670.4 4649.6 True False 3789.7770272377643 4253.279695716846 4081.0635437490146 3959.9689214638365 4418.607818889956 3797.2227797019755 3601.845137747413 3923.4510409719032 4811.996575300786 4375.510146944548 4077.7286762428403 0.9293843038938063 1.0430511771165107 1.0008178247674013 0.9711212382851558 1.0835953467510244 0.9312102597274032 0.8832969095594905 0.9621657919101458 1.1800678655585515 1.0730263081103473 1.0 11.993550069221754 -8.728331218570586 24.994421199271372 1.0850320833363076 0.9775673406667564 0.35864720031157016 0.06474659368146032 185.18351240362378 139800.9489590045 0.013775732746493997 0.015619742409261754 1.8692559918032545e-09 8.728331218570586 -0.1074647426695512 RTS(ph)VPS(ph)PEQPQPYR ddPTM_A549_MK2206_60min_R1 1 RTSVPSPEQPQPYR 14 1 Q8TEH3 Q8TEH3 DENND1A DENN domain-containing protein 1A 2 RT(0.187)S(0.816)VPS(0.997)PEQPQPY(0.001)R 62.287 0.010079000000000001 2379900.0 1175.4 1106.6 934.99 791.6 1153.1 575.93 858.33 857.07 1277.1 1153.3 1220.7 True False 1373.7787842290343 1162.9212133292417 1067.585641339262 985.5420355362743 983.4805175023328 636.8745303286065 1014.2774505965199 978.5622971667929 987.8388891096313 892.7687289983633 917.566500393907 1.4971980599109465 1.267397199908677 1.163496750242029 1.0740824072295423 1.0718356839314962 0.6940908697682394 1.105399390846435 1.066475614297929 1.0765856084387961 0.9729744150588561 1.0 9.84166891046825 -5.406095844891945 1.0676482324341208 1.0222149857614993 1.6543766080790963 0.6671885882622561 0.1076153738865495 0.6458731275663995 0.6808248332870858 0.015761171891129435 0.4331252736641669 3.925582917496206e-06 5.406095844891945 0.632161622317597 RTSEEDT(ph)PK ddPTM_A549_PD325901_60min_R1 1 RTSEEDTPK 9 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.001)S(0.001)EEDT(0.999)PK 68.515 0.0027338 15423000.0 4434.4 4057.8 3862.1 4231.3 4554.9 3616.9 3902.6 3602.0 3531.9 4307.8 4766.0 True False 4884.577023567254 4399.765046850336 4124.205330693951 4492.657791020468 4234.979537551943 3587.4451655793714 4051.115578584662 3530.1552842856663 3383.4665255130985 4035.804772826253 4179.812214163231 1.1686115962377301 1.0526226589658259 0.98669632016461 1.0748468019202309 1.0131985171969637 0.8582790282834638 0.9692099479630969 0.8445726993006499 0.809478118191117 0.9655469112107451 1.0 12.029222412666545 -7.0816311523495585 4.148686104556833 0.9043509688739985 1.0621362710379474 0.5667917974565193 0.06695365770861915 0.16411926920427014 5.220612377857187 0.012220873669303602 0.02197370837462798 8.286456362482492e-08 7.0816311523495585 0.15778530216394893 RTSS(ph)EDNLYLAVLR ddPTM_A549_MK2206_60min_R1 3 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RTS(0.028)S(0.972)EDNLYLAVLR;RT(0.288)S(0.288)S(0.424)EDNLYLAVLR;RT(0.005)S(0.247)S(0.748)EDNLYLAVLR 207.85 3.0668999999999994e-38 238107000.0 5416.45 5135.03 5733.01 4517.46 6965.85 5994.610000000001 5267.5 5393.950000000001 8229.05 7712.049999999999 7015.75 True False 6330.614340511619 5396.381093513518 6546.037024625299 5624.237902796487 5941.1826926057 6628.955651299929 6224.536566375604 6158.558930779075 6365.183314092561 5969.892548748662 5273.545650150363 1.2004474333755157 1.0232927619313683 1.2412971194131321 1.0665002781641086 1.1266011686911823 1.2570206254137422 1.1803323568836699 1.1678212988643566 1.2070026005958765 1.1320452964275458 1.0 12.36455756376912 -10.837822746766227 1.0453867278155928 0.9985211983595651 1.1637756933931849 0.11755408571900294 0.07653176440927621 0.38003852236092955 0.7264467172977782 0.046733767706617406 0.011065680745034334 1.45270440433465e-11 10.837822746766227 0.16525449503361977 RTSS(ph)EDNLYLAVLR ddPTM_A549_PD325901_60min_R1 2 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RTS(0.027)S(0.973)EDNLYLAVLR;RT(0.001)S(0.084)S(0.915)EDNLYLAVLR 234.28 1.7878999999999998e-48 171393000.0 7154.799999999999 7318.7 7996.9 7527.1 9307.9 8484.6 8776.3 9512.7 9051.8 8590.9 9811.099999999999 True False 7881.150028914623 7935.4725339798815 8539.617723266216 7992.031871715589 8654.145214511786 8415.504230660163 9110.286899075634 9322.961735931218 8671.384324482415 8048.469107867838 8604.396897687137 0.9159445017038995 0.9222578442555268 0.9924713869907218 0.9288311507182855 1.0057817319930955 0.9780469602607769 1.0587943591403228 1.0835113543445714 1.0077852553283873 0.9353902665776922 1.0 13.07085835860001 -6.582403673620907 1.0310986187949163 1.0137967118791993 0.9278529617995852 0.3909936551518459 0.04125950039575504 0.38836228219708213 0.7631125644420594 0.005665833857907523 0.021743392718238767 2.6157505564500124e-07 6.582403673620907 -0.08594375007961408 RTSS(ph)KSEAGAR ddPTM_A549_PD325901_60min_R1 2 RTSSKSEAGAR 11 2 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 RT(0.014)S(0.11)S(0.875)KSEAGAR;RT(0.103)S(0.103)S(0.793)KSEAGAR 82.90799999999999 0.00021494 95942000.0 6299.200000000001 6353.1 4419.0 4564.6 4962.8 4938.5 3451.8999999999996 4009.4 4813.4 6199.5 7983.1 True False 6938.690146774054 6888.498033206386 4718.899913605702 4846.544975041247 4614.23004873055 4898.282493354456 3583.263943452159 3929.4293716865463 4611.109537049393 5808.062511986712 7001.229309040391 0.9910674026651887 0.9838983597225648 0.6740101923975531 0.6922419993847522 0.6590599800484167 0.6996317756696687 0.5118049681397011 0.5612484891207092 0.6586142709388568 0.8295775292614693 1.0 12.773392544197666 -4.376319814210248 16.41487505953324 0.7787623844862401 0.7433505074307901 0.0 0.1680761986858686 0.0 0.0 0.026490342970249905 0.0 4.204169195825237e-05 4.376319814210248 -0.035411877055450014 RTSS(ph)PHKEES(ph)PKK ddPTM_A549_PD325901_60min_R1 1 RTSSPHKEESPKK 13 3 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 RT(0.285)S(0.333)S(0.389)PHKEES(0.993)PKK 47.916000000000004 0.010237000000000001 17314000.0 2511.8 2622.3 2395.5 2265.2 2833.2 2607.6 1811.0 1933.0 2233.2 3133.7 3864.6 True False 2766.7960869105696 2843.2904239626505 2558.073035311711 2405.1162593575414 2634.2058060093887 2586.364570147025 1879.9185960172254 1894.4447985908348 2139.346370162193 2935.837647199412 3389.278699717841 0.8163377320197677 0.8389072353947629 0.7547544070437971 0.7096248117800901 0.7772172309785819 0.763101768633645 0.5546662763890527 0.5589522038268934 0.6312099298119965 0.8662131111979141 1.0 11.726762558889998 -10.81294412359505 1.0975523281931632 0.9974892831591702 0.706954098571996 0.41291279140480863 0.09790612892043445 0.31453150595425544 0.6817070991012582 0.06837836545705214 0.017599171854595936 1.5383525522828652e-11 10.81294412359505 -0.2905351845871742 RTSS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 RTSSPPR 7 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.192)S(0.192)S(0.615)PPR 42.864 0.039379000000000004 24567000.0 1278.5 1055.4 1199.5 993.36 1105.5 918.74 620.49 752.17 1094.4 1038.5 1583.9 True False 1408.2923788180453 1144.3422619266223 1280.9052831794604 1054.7175911157544 1027.853493767959 911.2580860472766 644.1030864951559 737.1673792840504 1048.4061738785172 972.9289327684808 1389.090341169354 1.0138234620741275 0.8238069389808732 0.9221180546840302 0.7592865344005486 0.7399471893978464 0.6560106704652254 0.46368696650279906 0.5306835397498291 0.7547429730135158 0.7004072405754811 1.0 10.439924714448408 -4.723648323729313 1.0889773249530619 0.796830109405849 1.428493226944066 0.11495367654896271 0.15730850530827936 9.705923066346632 4.064957777113395 0.02927503029879026 9.384372206971182 1.8895207967023215e-05 4.723648323729313 0.631663117538217 RTSS(ph)PPRK ddPTM_A549_MK2206_60min_R1 1 RTSSPPRK 8 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.025)S(0.103)S(0.872)PPRK 80.102 0.00081573 24208000.0 2657.4 2487.6 1279.1 1149.2 2414.4 1702.6 1971.8 1755.1 2528.4 3791.1 4155.0 True False 3105.9041528077582 2614.2082146013236 1460.4956136825533 1430.7540515895478 2059.24495833634 1882.7680019055886 2330.0505366073885 2003.8907997683248 1955.721437025129 2934.6878769667 3123.198827833768 0.9944625123217002 0.8370290713814473 0.46762812558288014 0.4581053370149701 0.6593384129068145 0.6028332186623755 0.7460461741475157 0.6416148667544843 0.6261917811942846 0.9396417067056156 1.0 11.608808701218452 -10.717984306698195 0.8015387130291766 1.0179176511398857 0.6596429264652296 0.37794460887896375 0.14673158394775843 0.5872219574895049 0.6164063428754137 0.13386399285360076 0.028619563107938874 1.9143250982203536e-11 10.717984306698195 -0.35827472467465615 RTSSTENK ddPTM_A549_MK2206_60min_R1 2 RTSSTENK 8 1 Q9Y2K7-5 Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 0 ; 94.262 0.001341 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RTSSTENK ddPTM_A549_PD325901_60min_R1 2 RTSSTENK 8 1 Q9Y2K7-5 Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 0 ; 77.67399999999999 0.0027111 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RTT(ph)SFFSR ddPTM_A549_PD325901_60min_R1 1 RTTSFFSR 8 1 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 RT(0.204)T(0.739)S(0.057)FFSR 73.95100000000001 0.0031590999999999998 15981000.0 1308.8 1472.4 1752.5 1160.9 1777.3 1547.2 1431.3 1587.8 1775.6 1518.0 2062.5 True False 1441.668412512363 1596.4843153882503 1871.4351886386025 1232.6061564048068 1652.4685793521426 1534.600116172526 1485.7689047374124 1556.1300833949963 1700.9777068153269 1422.1532209364993 1808.8255752647233 0.7970190339117543 0.8826082167456104 1.0346134056428942 0.68144003117847 0.9135588317355046 0.8483958526227361 0.8213997662654503 0.8602985852669931 0.940376855610518 0.7862301597147453 1.0 10.820837580496816 -9.008896544328406 1.5458230244899993 0.980409893794479 0.8557938391461067 0.0 0.10009151290511083 0.300709519524508 1.454645741272517 0.015991141891613728 0.01562214406212113 9.797233428863568e-10 9.008896544328406 -0.12461605464837222 RTTS(ph)FFSR ddPTM_A549_PD325901_60min_R1 1 RTTSFFSR 8 1 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 RT(0.282)T(0.282)S(0.435)FFSR 55.31399999999999 0.0088355 21676000.0 772.16 716.67 782.89 656.98 1072.9 1003.6 755.6 881.09 789.16 897.62 1093.5 True False 850.5491147658521 777.0662960535838 836.0216233000149 697.5601624901631 997.5432053040644 995.4270143425198 784.3547714801851 863.5159687482666 755.9943495778241 840.9441200112124 959.0064322676232 0.8869065797136336 0.8102826737211428 0.8717580979339169 0.7273779810222377 1.0401840610654913 1.0379774116725977 0.8178827013970442 0.9004277131973305 0.7883099884848885 0.8768910110673127 1.0 9.905396681524367 -11.066987559932436 1.3936159605301481 0.9996934677792475 0.8669300981937929 0.0 0.09803681236253811 0.5497683269640873 1.9126725108226401 0.06749692347684438 0.015082421298986666 8.57062394843231e-12 11.066987559932436 -0.13276336958545465 RTVNSTRET(ph)PPK ddPTM_A549_MK2206_60min_R1 1 RTVNSTRETPPK 12 2 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK9;B0QZK8;Q5SSJ5-5;B0QZK7;B0QZK5;B0QZK6 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 RT(0.011)VNS(0.011)T(0.011)RET(0.966)PPK 46.592 0.012859 15375000.0 1551.6 1749.9 1492.1 1274.8 2055.4 1284.2 1269.1 1315.5 2148.7 2140.5 2127.2 True False 1813.4721470220943 1838.962435572782 1703.7022165395497 1587.126057227947 1753.0533827719155 1420.0931916170318 1499.6790425035178 1501.9761535497883 1662.0228807688247 1656.959563358186 1598.9575322666637 1.1341590445190481 1.1501008616319472 1.0655081089767289 0.992600507017879 1.096372697457954 0.8881369035511056 0.9379104899537827 0.9393471203832439 1.0394415406472743 1.0362749040678392 1.0 10.64291590653105 -5.975316422892812 2.2912020819487195 1.002001718995294 1.1458742643115454 0.5274346844717199 0.05482323369626297 0.19945638305735316 2.041951938786025 0.008060838569293505 0.03240477771839435 1.0584822439130426e-06 5.975316422892812 0.14387254531625127 RTVNSTRET(ph)PPK ddPTM_A549_PD325901_60min_R1 1 RTVNSTRETPPK 12 2 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK9;B0QZK8;Q5SSJ5-5;B0QZK7;B0QZK5;B0QZK6 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 RT(0.003)VNS(0.003)T(0.003)RET(0.992)PPK 52.527 0.008513600000000001 27684000.0 2655.6 2542.7 2620.1 2526.9 2869.4 2791.9 2575.9 2808.4 2871.7 2849.8 3174.9 True False 2925.1945570506055 2756.9822526064254 2797.9157419412277 2682.9808739937193 2667.8632428926094 2769.1636920514943 2673.927284086566 2752.3842588528196 2751.0124356057536 2669.863141650089 2784.4074273493175 1.0505626900425682 0.9901504447684224 1.0048514145089642 0.963573379255006 0.9581439902393685 0.9945253215646193 0.9603218472348619 0.9884991082188777 0.9880064277176006 0.9588622395651804 1.0 11.443154613093686 -3.3755183162257114 0.000748805106247164 1.396196168227843 0.5816121927613499 0.0 0.026602040372541037 2568928.793613886 253.45208998325998 137366.20891493934 138350.91190623687 0.0004211935226823703 3.3755183162257114 -0.8145839754664931 RTYS(ph)DEANQMR ddPTM_A549_PD325901_60min_R1 1 RTYSDEANQMR 11 1 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 RT(0.2)YS(0.8)DEANQMR 74.46 0.0011305 2716600.0 925.43 692.5 874.99 975.49 945.82 1039.7 1217.0 663.25 1327.2 1020.0 1080.9 True False 1019.3789723344418 750.8594053289613 934.372083142306 1035.7438018014686 879.3888661018644 1031.2330279114367 1263.3136009679538 650.0209584404407 1271.422399462324 955.5970259257115 947.9561523896424 1.0753440122359605 0.7920824222050435 0.9856701502352264 1.092607289050794 0.9276682933963443 1.0878488686548073 1.3326709234212435 0.6857078323737277 1.341224903976071 1.0080603659956293 1.0 9.888676518736858 -7.047529102901868 0.9104009570180466 1.1379222412234884 0.9423415930104989 0.0 0.18766007456583228 0.9047502812101974 1.450849228509944 0.033440698094746917 0.09365949834894353 8.963361187438327e-08 7.047529102901868 -0.19558064821298948 RTYS(ph)LTTPAR ddPTM_A549_MK2206_60min_R1 2 RTYSLTTPAR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RT(0.01)YS(0.987)LT(0.003)TPAR;RT(0.2)YS(0.8)LTTPAR 128.41 6.1083e-07 28203000.0 1720.51 1901.85 1383.4099999999999 1743.51 3161.0 2286.2 2274.07 2593.4 3283.7 3683.6000000000004 4005.7000000000003 True False 2010.8900255690799 1998.6460415418585 1579.5983401802673 2170.6700282691368 2696.0210873513784 2528.1241665432626 2687.2390829611327 2961.022391954405 2539.9471929913852 2851.4722016286937 3010.974138304146 0.6678536358009578 0.6637871830634668 0.5246137188909685 0.720919519252899 0.8953982875687677 0.8396366260280016 0.89248162206888 0.983410104486027 0.8435632709957268 0.9470264673992558 1.0 11.556014601259852 -6.674466515794378 2.842496522512009 0.9194773360464392 0.6216648235227659 0.834034980539264 0.05911067936182101 0.08988007702474228 1.4658814338749284 0.010374508607425031 0.023166529481589652 2.1160868297386473e-07 6.674466515794378 -0.29781251252367336 RTYS(ph)LTTPAR ddPTM_A549_PD325901_60min_R1 2 RTYSLTTPAR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RT(0.04)YS(0.889)LT(0.07)T(0.001)PAR;RT(0.041)YS(0.959)LTTPAR 126.1 3.8339e-06 43297000.0 5991.0 5670.0 6566.0 5597.5 7140.9 6825.7 5978.0 6483.9 7008.0 7024.3 8252.9 True False 6599.201909658898 6147.830798866732 7011.608244565519 5943.244862155147 6639.347818767635 6770.1137622536235 6205.496061287117 6354.5735279788505 6713.478130976469 6580.784499225459 7237.845619443506 0.911763286568454 0.8494006534695083 0.9687424426033308 0.8211345163524092 0.91730995213989 0.9353769226669628 0.8573678394876068 0.8779647787607043 0.927551993225941 0.9092186881614412 1.0 12.821344620551793 -9.827642832249229 0.6811382378603544 0.9960696407624002 0.891718795379895 0.10525133919382823 0.04756953455036615 0.3812656092084201 0.36839534139847796 0.018316064051377732 0.00856928995474046 1.4871581919877479e-10 9.827642832249229 -0.10435084538250528 RVAFISLS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 RVAFISLSPVR 11 1 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 RVAFIS(0.008)LS(0.992)PVR;RVAFIS(0.001)LS(0.999)PVR 145.1 9.4045e-12 36032000.0 1226.04 1502.6599999999999 1378.3200000000002 1737.06 2335.7 1458.31 1555.3899999999999 1504.71 2138.2 2035.91 2088.0 True False 1432.9655781999027 1579.138975620205 1573.7865016425117 2162.6397779795857 1992.1216240830802 1612.6273962521666 1837.984229705733 1718.0072504811096 1653.901114003769 1575.9965169990971 1569.491974131627 0.913012364394369 1.006146575865044 1.0027362532473354 1.3779234386822126 1.2692779937185004 1.0274836844224104 1.171069530777727 1.0946263369276887 1.0537811860547066 1.0041443619812511 1.0 10.61608193613063 -9.085119281197324 1.209476828203956 1.015522576118204 1.1157216596169353 0.094053983525906 0.12438400071069347 0.741035998793079 2.2297219323412003 0.02964342670088912 0.02739132662764622 8.220168478144818e-10 9.085119281197324 0.10019908349873119 RVAFISLS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 RVAFISLSPVR 11 1 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 RVAFIS(0.002)LS(0.998)PVR;RVAFIS(0.173)LS(0.827)PVR 151.99 2.2554e-12 58662000.0 1310.51 1422.56 1492.87 1106.08 1525.81 1449.23 1591.94 1623.9 1535.24 1402.75 1475.87 True False 1443.5520104535287 1542.4441236747539 1594.1851355565827 1174.40004951006 1418.6423693587412 1437.4279513706751 1652.522147842994 1591.5100405750948 1470.7192017409127 1314.1801256051874 1294.3473463107607 1.1152740526474918 1.1916771244373745 1.2316517201510404 0.9073299009399733 1.0960291094985088 1.110542664971449 1.2767223207534888 1.2295849681396018 1.1362631568201993 1.0153226097700556 1.0 10.338009110304196 -10.385673927812613 0.9450920055952738 1.0069770807052165 1.1429945991707497 0.23719834093579883 0.09336456748257042 0.6063651636810837 1.039920193594471 0.04911934908677864 0.018068350125298713 4.114585319126263e-11 10.385673927812613 0.13601751846553323 RVALS(ph)DDETKETENMR ddPTM_A549_MK2206_60min_R1 3 RVALSDDETKETENMR 16 2 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 RVALS(0.995)DDET(0.003)KET(0.001)ENMR;RVALS(0.74)DDET(0.23)KET(0.03)ENMR;RVALS(0.786)DDET(0.211)KET(0.002)ENMR 89.48299999999999 2.3453e-06 50378000.0 7681.4 8445.0 8421.4 7217.4 10078.6 6951.6 6053.099999999999 5935.5 11477.699999999999 11668.099999999999 11913.300000000001 True False 8977.832527800676 8874.814428488566 9615.681151642762 8985.6633240014 8596.051291040685 7687.213697901386 7152.8699174044905 6776.875301706399 8878.019276120598 9032.268106152607 8954.8988196467 1.00256102370511 0.9910569183671364 1.0737900388719448 1.0034354943561399 0.9599272380589363 0.8584366895398011 0.7987661347676394 0.7567785452626442 0.9914148060101549 1.008639883941085 1.0 13.128461416123061 -6.722450544353887 4.10874794149295 0.9494583268213724 1.0216028097209977 0.19088033062939036 0.08532113471716583 0.422879469608058 15.268614479788713 0.014744377003314177 0.030933636086683085 1.8947392670851618e-07 6.722450544353887 0.07214448289962527 RVALS(ph)DDETKETENMR ddPTM_A549_PD325901_60min_R1 1 RVALSDDETKETENMR 16 2 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 RVALS(0.682)DDET(0.222)KET(0.096)ENMR 48.354 0.012075 34104000.0 4155.7 5072.3 4553.9 5291.9 6533.3 6533.6 6311.7 5664.4 5967.2 6618.6 6526.8 True False 4577.583604735353 5499.7605222384 4862.955038825295 5618.7686442231 6074.423546661427 6480.392527808174 6551.895197394768 5551.419098364161 5716.419335496976 6200.700466462657 5724.044976794084 0.7997113270935828 0.9608171397211311 0.8495661824007772 0.9816080528720885 1.0612117080295171 1.1321351516419609 1.1446267847224962 0.9698419772853346 0.9986677880191328 1.0832724920228594 1.0 12.482819292775384 -6.40810207109462 4.275599600431356 1.0220631881583488 0.8798197287405383 0.560986837120524 0.06761666366252181 0.16172376494181334 4.908587555542544 0.009869696694322682 0.02368250472433434 3.9074904827407955e-07 6.40810207109462 -0.14224345941781058 RVASGPS(ph)PGEGISPQSAQAPQAPGDNHVVPVLR ddPTM_A549_PD325901_60min_R1 1 RVASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 33 1 Q14764 Q14764 MVP Major vault protein 1 RVAS(0.46)GPS(0.529)PGEGIS(0.01)PQS(0.001)AQAPQAPGDNHVVPVLR 44.869 0.0054706 7083700.0 1741.2 1776.5 1515.0 1458.8 1889.0 1722.0 1982.9 1728.9 2102.9 1707.7 2220.7 True False 1917.9653421963085 1926.2118896272927 1617.8170104350834 1548.906762824819 1756.3231566962218 1707.9766029272798 2058.360344584514 1694.4157332041882 2014.5224260317386 1599.875530562094 1947.5679781771491 0.9848002039915713 0.9890344836282198 0.830685772493189 0.7953030549796458 0.9018032625182483 0.876979197679088 1.0568875477769266 0.8700162213542338 1.0343784908176896 0.8214735241537077 1.0 10.927457969851464 -8.090799995258966 1.0925284513953557 1.013249162501206 0.8949731396710653 0.0 0.09340489051709405 0.4157541888072982 0.9823710124961964 0.01399152209582441 0.019928060192204104 8.113346140853073e-09 8.090799995258966 -0.1182760228301406 RVASGPSPGEGIS(ph)PQSAQAPQAPGDNHVVPVLR ddPTM_A549_MK2206_60min_R1 2 RVASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 33 1 Q14764 Q14764 MVP Major vault protein 1 RVASGPSPGEGIS(0.961)PQS(0.038)AQAPQAPGDNHVVPVLR;RVAS(0.003)GPS(0.002)PGEGIS(0.812)PQS(0.183)AQAPQAPGDNHVVPVLR 130.82 3.8086e-30 21715300.0 2910.7 3985.7 2740.7 2568.2 4133.5 2845.8999999999996 3228.5 2701.0 4803.4 4264.2 4863.6 True False 3401.955000217332 4188.555105698864 3129.37247159704 3197.4091152908786 3525.4676256143384 3147.051249044471 3815.0766596191065 3083.875021465584 3715.4375694536075 3300.91425838448 3655.8338914686665 0.9305551349464231 1.1457181124868303 0.8559941628912112 0.8746045937022527 0.9643402108179604 0.860829934420297 1.0435585349000818 0.8435489994942553 1.0163037161300008 0.9029169148214216 1.0 11.83598480544138 RVASGPSPGEGIS(ph)PQSAQAPQAPGDNHVVPVLR ddPTM_A549_PD325901_60min_R1 2 RVASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 33 1 Q14764 Q14764 MVP Major vault protein 1 RVASGPSPGEGIS(0.947)PQS(0.053)AQAPQAPGDNHVVPVLR;RVAS(0.002)GPS(0.002)PGEGIS(0.88)PQS(0.115)AQAPQAPGDNHVVPVLR 166.5 2.3760999999999998e-52 36659000.0 3920.1000000000004 3728.1 3277.5 4618.0 4007.1 3627.8 4006.7999999999997 3802.9 4960.9 3861.2 4419.6 True False 4318.065666174909 4042.2800707680876 3499.9308592085717 4903.243371761049 3725.655119744537 3598.256399593258 4159.280966605088 3727.0481761826622 4752.410624994456 3617.4031730434835 3876.017218152713 1.114047080583629 1.0428952822595081 0.90297092665564 1.2650210501639376 0.9612070612834279 0.9283386004431027 1.0730811378044849 0.9615664653726568 1.2261066856817078 0.9332784065307936 1.0 11.920359264209807 -8.73390259434028 24.999351502746592 1.1067726926588004 1.0306965896918128 0.0 0.11906477368773966 437.46641478536367 397154.8761119161 0.020068751821180886 0.02275308651644515 1.8454292745397438e-09 8.73390259434028 -0.07607610296698764 RVDAENR ddPTM_A549_PD325901_60min_R1 2 RVDAENR 7 1 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ; 130.27 0.0057675 20041400.0 2009.48 1855.78 1696.37 1387.46 1632.8000000000002 1366.33 1418.4 1662.63 1186.37 1947.68 2277.6 False True 2213.4809302990107 2012.1730934604757 1811.4958693014923 1473.1602530497146 1518.1177608542048 1355.2030614852672 1472.3779881782616 1629.467540341998 1136.510994612807 1824.7031524068525 1997.4696388959662 1.1081424654456513 1.0073610403273194 0.9068953209735571 0.737513213899939 0.7600204435113682 0.6784599050197878 0.7371215859841899 0.8157658612736818 0.5689753538586825 0.9135073279088214 1.0 10.963957859331178 -5.827675054363049 1.9032478197103038 0.7753615218597443 1.0945928915414718 0.5077081876980813 0.10849201237925062 0.3248826817591413 2.168733417441752 0.021847546761648403 0.12344486940942052 1.4870478576296034e-06 5.827675054363049 0.3192313696817275 RVDHLT(ph)EQCSAHK ddPTM_A549_PD325901_60min_R1 1 RVDHLTEQCSAHK 13 1 C9JR62;B8ZZB3;Q6ZP82;Q6ZP82-2 C9JR62 CCDC141 Coiled-coil domain-containing protein 141 1 RVDHLT(0.98)EQCS(0.02)AHK 53.995 0.012844999999999999 703040000.0 5390.5 5465.7 8806.5 7121.3 6477.9 7529.2 8599.3 7982.8 8739.6 7692.1 10841.0 True False 5937.739591723636 5926.313720875815 9404.162047786507 7561.166527354259 6022.914651541799 7467.884691498304 8926.551067217511 7823.576791614546 8372.30500477768 7206.419493258005 9507.625726761142 0.6245239097928165 0.6233221512070046 0.9891178216362246 0.7952738932572643 0.6334825144188294 0.7854626282225674 0.9388833052285517 0.8228738716116581 0.8805884082302617 0.7579620507119958 1.0 13.214869396527472 -3.3730814765083457 0.07866263527993228 1.2019573888896171 2.306777474854156e-12 0.1314812521163201 0.12362563383107728 80.4647005999424 0.589824395030678 1.7351006421708948 10.87189091571419 0.0004235634952906531 3.3730814765083457 -1.2019573888873103 RVDHLTEQCS(ph)AHK ddPTM_A549_MK2206_60min_R1 1 RVDHLTEQCSAHK 13 1 C9JR62;B8ZZB3;Q6ZP82;Q6ZP82-2 C9JR62 CCDC141 Coiled-coil domain-containing protein 141 1 RVDHLT(0.414)EQCS(0.586)AHK 49.423 0.024437 10754000.0 2466.2 2298.2 2962.3 2451.3 5985.7 3587.6 2674.7 2946.9 5172.7 4640.2 5422.0 True False 2882.4342671989516 2415.168563594129 3382.398683771268 3051.868610043039 5105.211459208841 3967.2374507438553 3160.6583681224147 3364.63209950275 4001.0917091045258 3591.97559724114 4075.567760412682 0.7072472932966481 0.592596836949553 0.8299208558438431 0.7488204808387272 1.2526381008303735 0.9734195783171429 0.7755136348910499 0.8255615652338106 0.9817262144353073 0.881343608645443 1.0 11.992785337398457 -6.5551905000274235 24.999719060077627 0.9764523480978858 0.7133859058634744 0.4412402826499541 0.12694602171558805 118.7498147994545 91876.79329750374 0.017829447518253057 0.03711514882784577 2.7848993254057634e-07 6.5551905000274235 -0.26306644223441145 RVDS(ph)ITAAGGEGPFPTSR ddPTM_A549_PD325901_60min_R1 2 RVDSITAAGGEGPFPTSR 18 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 RVDS(0.995)IT(0.005)AAGGEGPFPTSR;RVDS(0.941)IT(0.059)AAGGEGPFPTSR 109.68 1.2033e-09 17987600.0 1816.26 1724.96 1666.65 1470.06 2219.7 1969.1599999999999 1755.98 1862.19 2418.0 1839.38 2110.47 True False 2000.6453781400553 1870.3284329476476 1779.7588913806148 1560.862267451504 2063.7959295492874 1953.1238138329177 1822.8047798091254 1825.0471595902065 2316.3798688215043 1723.2412328894463 1850.8955693716075 1.0809066763390054 1.010499168023098 0.9615663470332126 0.8433010988196531 1.1150255928539292 1.0552317732847658 0.984823136417135 0.986034647114004 1.2514913899804363 0.9310310432449191 1.0 10.854007782896016 -8.671023665176932 24.968501240500856 1.1187932047164568 1.0027526468378392 0.0 0.10279080259286189 23.14599981520797 6384.530405638948 0.01851498336045763 0.020994014975062557 2.1329286843845783e-09 8.671023665176932 -0.11604055787861767 RVEHHDHAVVSGR ddPTM_A549_PD325901_60min_R1 2 RVEHHDHAVVSGR 13 1 O95831-3;O95831;E9PMA0;O95831-5;O95831-2 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 0 ; 79.875 0.00022892 11111100.0 207.37 574.1800000000001 564.76 581.19 887.1899999999999 893.1600000000001 592.28 569.08 628.35 912.03 690.86 False True 228.42204974227445 622.5681636848853 603.0880097777674 617.0887863217415 824.8768350393449 885.8864010862542 614.8195395080517 557.7292529653768 601.9426346459849 854.4442701519863 605.8885997223688 0.3770033795766125 1.027529093582813 0.9953777147385102 1.0184855542825941 1.3614331667856454 1.462127528876078 1.014740234078963 0.9205145190402003 0.9934873092542226 1.4102332847053256 1.0 9.242908750136188 -5.2601164318307045 5.421694935519693 1.0485782177884333 0.3508130053318385 0.5141661929548195 0.19688078628088682 0.08978477738169675 9.74605523706767 0.02427549489924014 0.2312622926440453 5.493935648851504e-06 5.2601164318307045 -0.6977652124565947 RVEHNQS(ph)YSQAGITETEWTSGSSK ddPTM_A549_MK2206_60min_R1 1 RVEHNQSYSQAGITETEWTSGSSK 24 1 P42167 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 RVEHNQS(0.894)YS(0.106)QAGITETEWTSGSSK 123.28 7.2806e-17 7288100.0 1865.1 2161.1 1984.7 1757.3 2490.2 1847.6 1706.9 1595.3 2589.0 2858.9 3249.5 True False 2179.8832826829785 2271.090759195576 2266.160303710236 2187.838578888195 2123.894878747993 2043.1118056623775 2017.0216355285277 1821.4386604013498 2002.5956337834446 2213.0725044077167 2442.5594683624154 0.8924586323969648 0.9297995764738541 0.9277810153910218 0.8957155832750329 0.8695366095515917 0.8364634851785849 0.8257819969807391 0.7457090334928514 0.8198758964612071 0.9060465192650743 1.0 11.254177972205646 -4.32147626843777 16.64037962459518 0.8905631065769614 0.886227155727388 0.0 0.0665485762346196 0.0 0.0 0.01135484505817122 0.0 4.770058788883788e-05 4.32147626843777 -0.004335950849573389 RVEIQMPKPAEAPTAPS(ph)PAQTLENSEPAPVSQLQSR ddPTM_A549_MK2206_60min_R1 4 RVEIQMPKPAEAPTAPSPAQTLENSEPAPVSQLQSR 36 2 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7EJ51;Q9UHD8-3 Q9UHD8 SEPT9 Septin-9 1 RVEIQMPKPAEAPT(0.042)APS(0.472)PAQT(0.472)LENS(0.013)EPAPVSQLQSR;RVEIQMPKPAEAPT(0.144)APS(0.503)PAQT(0.35)LENS(0.002)EPAPVSQLQSR;RVEIQMPKPAEAPT(0.093)APS(0.555)PAQT(0.349)LENS(0.003)EPAPVSQLQSR;RVEIQMPKPAEAPT(0.12)APS(0.756)PAQT(0.12)LENS(0.004)EPAPVSQLQSR 73.65 4.4981e-06 17646000.0 3012.62 4174.0 3587.17 3103.23 5981.3 4001.25 3737.9800000000005 3681.23 6236.7 5878.9 5524.0 True False 3521.076604512571 4386.4387714045315 4095.88464587104 3863.5214893092902 5101.4586933802 4424.659619185208 4417.122580803167 4203.055625794057 4824.097407963385 4550.852406926629 4152.238345355891 0.8479948190957658 1.0564034158372877 0.9864281154409451 0.93046717648819 1.228604494509804 1.0656082939299494 1.0637931191362215 1.0122385268405902 1.1618064780310458 1.0959998026164781 1.0 12.019673543818795 -4.104163409617855 0.7170013073785267 1.0749148544756624 3.0808323909465143e-16 0.3762652597165428 0.07866450277726371 10.83542414218495 1.1216916208200383 0.013636475808111134 13.889660495596361 7.86749707971133e-05 4.104163409617855 -1.0749148544756622 RVEIQMPKPAEAPTAPS(ph)PAQTLENSEPAPVSQLQSR ddPTM_A549_PD325901_60min_R1 4 RVEIQMPKPAEAPTAPSPAQTLENSEPAPVSQLQSR 36 2 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7EJ51;Q9UHD8-3 Q9UHD8 SEPT9 Septin-9 1 RVEIQMPKPAEAPT(0.133)APS(0.703)PAQT(0.163)LENS(0.001)EPAPVSQLQSR;RVEIQMPKPAEAPT(0.109)APS(0.873)PAQT(0.018)LENSEPAPVSQLQSR;RVEIQMPKPAEAPT(0.016)APS(0.854)PAQT(0.129)LENS(0.001)EPAPVSQLQSR;RVEIQMPKPAEAPT(0.016)APS(0.958)PAQT(0.026)LENSEPAPVSQLQSR 107.2 9.054e-15 37927500.0 4616.21 4438.9 4382.09 4708.87 5323.1900000000005 5038.06 5426.9 5979.5 5533.43 5381.9 6075.599999999999 True False 5084.844240925812 4812.981681320905 4679.484979047839 4999.726205280306 4949.307498408557 4997.031709723469 5633.423649213627 5860.234181672996 5300.879180121168 5042.085915519201 5328.339716401622 0.9543018109888366 0.9032798090004756 0.8782257191003631 0.9383272222471509 0.9288648550642644 0.9378215308497833 1.0572568471700292 1.0998236774645023 0.9948463240442561 0.946277111423418 1.0 12.37947035121988 -7.619659281525708 6.342129615581778 1.0107618110324799 0.919726404027433 0.578140038350677 0.04075607822206228 0.12303496313816915 6.860854448956297 0.006085403078252195 0.009051581614948881 2.4007156217020602e-08 7.619659281525708 -0.09103540700504686 RVELSGPK ddPTM_A549_PD325901_60min_R1 1 RVELSGPK 8 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 0 58.981 0.013614 1722600.0 774.93 1044.0 722.47 740.27 1154.1 1020.4 876.51 1225.9 1253.6 1023.5 1156.3 False True 853.6003231266852 1131.981543918319 771.5011587650391 785.9947966248487 1073.0399974288573 1012.0902007125413 909.8660676946757 1201.4484628000548 1200.9155515114303 958.8760353283973 1014.0824303896233 0.841746486820328 1.1162618639230317 0.7607874228415719 0.7750797894436053 1.05813883099876 0.9980354361564903 0.8972308763352637 1.1847641047665556 1.1842385939474598 0.9455602489434562 1.0 9.985959212231025 -7.741406177656453 1.2603020680765238 1.0927284885806252 0.9045442461518312 0.22018481745913898 0.12663473188989818 0.4114997504088253 1.324744358098833 0.02204235477704586 0.03613946355391897 1.813818479881665e-08 7.741406177656453 -0.18818424242879406 RVEPGS(ph)PAEAAALR ddPTM_A549_MK2206_60min_R1 2 RVEPGSPAEAAALR 14 1 Q15599-2;Q15599 Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 RVEPGS(1)PAEAAALR;RVEPGS(1)PAEAAALR 92.47399999999999 2.5599e-05 10170300.0 1749.83 1371.83 1220.89 1484.6100000000001 2313.9 1561.17 1369.1399999999999 1349.17 2199.3 2204.5 2416.6 True False 2045.1585247639025 1441.6502874403166 1394.0305603853433 1848.3395166466757 1973.5283752047958 1726.3719731792253 1617.8950155647822 1540.4189791598371 1701.1620615604206 1706.501918908257 1816.491525232992 1.1258838790902592 0.793645479438944 0.7674302582868028 1.0175326947421892 1.0864506372809317 0.9503881241382574 0.8906702800924233 0.8480188086549182 0.9365097705821784 0.9394494250059179 1.0 10.826938919596406 -7.97628103960231 0.008464475005800772 1.8855814370910422 7.076993483905644e-07 0.0 0.10921075609895378 5600.4654682606615 26.785117531472366 2945.217993574451 3019.3820381929672 1.0561338452340593e-08 7.97628103960231 -1.8855807293916937 RVEPGS(ph)PAEAAALR ddPTM_A549_PD325901_60min_R1 2 RVEPGSPAEAAALR 14 1 Q15599-2;Q15599 Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 RVEPGS(1)PAEAAALR;RVEPGS(1)PAEAAALR 65.78399999999999 0.0018907 16350100.0 2576.7 3273.6 2934.1 3569.5 3380.3 3516.7 2990.3999999999996 3401.3 3491.5 3723.1000000000004 3803.0 True False 2838.284687133717 3549.4777607001975 3133.2256701766173 3789.979908077318 3142.8793894019263 3488.0611611581694 3104.201308409667 3333.4584032317694 3344.7643970183144 3488.0228306117815 3335.2551092032686 0.8509947797701541 1.0642297648853922 0.939426091134926 1.1363388358567494 0.9423205381589844 1.0458154015065442 0.9307237997609136 0.9994612987874476 1.0028511425674174 1.0458039089684525 1.0 11.703581400106867 -5.246229998716921 24.107633541809474 1.003443026021517 0.8509945980098526 0.37296431027051635 0.05884993374434223 1225.5406861295194 1942491.3124936689 0.006611692414578043 0.20978243302458516 5.672441181180527e-06 5.246229998716921 -0.15244842801166447 RVES(ph)EES(ph)GDEEGK ddPTM_A549_MK2206_60min_R1 2 RVESEESGDEEGK 13 1 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 2 RVES(1)EES(1)GDEEGK;RVES(1)EES(1)GDEEGK 67.234 0.0073548 8310400.0 1102.03 1051.79 1037.1 1087.54 1311.15 1057.4 1011.15 1230.75 1754.58 1275.4099999999999 1650.37 True False 1288.025721953312 1105.3216184416801 1184.1763747558248 1353.9873488215262 1118.2815718699026 1169.2933661546876 1194.8628664623993 1405.2125815137983 1357.170431488511 987.2939951892845 1240.5375811051779 1.0382802920052028 0.8910021230126413 0.9545671108978886 1.091452100641141 0.9014491692171396 0.9425698858014283 0.9631815147413046 1.132744870382656 1.09401799039367 0.7958598032231461 1.0 10.276749725860038 -8.209565206831853 24.62523444415306 1.0522639827284779 0.966482534563857 0.0 0.09914123632949293 290.6840141293001 137990.90756613747 0.010574672367114523 0.013651835417162939 6.172126139884218e-09 8.209565206831853 -0.08578144816462085 RVES(ph)EES(ph)GDEEGK ddPTM_A549_PD325901_60min_R1 2 RVESEESGDEEGK 13 1 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 2 RVES(1)EES(1)GDEEGK;RVES(1)EES(1)GDEEGK 96.67299999999999 0.00027162 17567500.0 2916.1 2533.1 2835.9 2715.3 3612.6000000000004 2268.5 2238.2 2400.8 3121.2 2900.1 3065.7 True False 3212.140325280642 2746.5732269152245 3028.3612276520485 2883.017914106276 3358.863438793422 2250.026088118777 2323.3759257900347 2352.9141606088365 2990.026818265375 2716.987191065836 2688.638335073483 1.1947089660137764 1.021548042027809 1.1263549984194063 1.0722966627742738 1.2492804982272265 0.8368645417150468 0.8641459490781732 0.8751322667369946 1.1120970713168288 1.0105439454695486 1.0 11.392659987330019 -5.258521984626524 23.173284086724284 1.0340420463666984 1.1947091185076888 0.14093965914575113 0.11957058393327806 165.29301216531658 1312731.0869670126 0.0168239644380292 0.16003382839985353 5.514142882715465e-06 5.258521984626524 0.1606670721409904 RVES(ph)EES(ph)GDEEGKK ddPTM_A549_MK2206_60min_R1 2 RVESEESGDEEGKK 14 2 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 2 RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK 104.03 2.0036e-05 338630000.0 14249.5 12741.2 11211.1 12205.0 13947.6 10578.6 9308.8 11232.9 12286.5 17439.2 17755.3 True False 16654.467233173073 13389.672657934712 12801.002560047282 15195.225547903276 11895.92651627399 11698.020430493629 11000.08846494109 12825.197974313493 9503.627367508796 13499.672607949586 13346.168988649073 1.2478837370737408 1.0032596372279294 0.9591518413212469 1.1385458674190942 0.8913364221891305 0.8765077409436973 0.82421318614328 0.9609647521488252 0.7120865452544201 1.0115016990591883 1.0 13.704138055974616 -6.836785780467007 6.468074225772554 0.867332997328066 1.0716400667387218 0.40409923813268234 0.1071857089436091 0.167408554544341 11.405653097359464 0.017524809351188712 0.03347030362391858 1.4561771755294875e-07 6.836785780467007 0.2043070694106558 RVES(ph)EES(ph)GDEEGKK ddPTM_A549_PD325901_60min_R1 2 RVESEESGDEEGKK 14 2 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 2 RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK 120.11 1.9751e-06 629110000.0 55337.0 55387.0 54578.0 54659.0 64575.0 50229.0 54793.0 57054.0 56777.0 54191.0 61979.0 True False 60954.77150305372 60054.656870693405 58281.99128417557 58035.16229040428 60039.474771656205 49819.9516773719 56878.177598880065 55916.013212002865 54390.860137336065 50769.37101170607 54355.97591725198 1.1213996340687054 1.1048400080630827 1.072227851688291 1.0676868791529612 1.1045606993250645 0.9165496679374238 1.0464015527100043 1.0287003824036898 1.0006417734112105 0.934016364437906 1.0 15.730151033978581 -7.223675216286321 24.996054201328256 1.00128350321117 1.092050015933031 0.641103076692433 0.03891956950867903 255.95663761222 169417.4293625889 0.004567361168637528 0.007910749991028669 5.974819417217066e-08 7.223675216286321 0.09076651272186109 RVES(ph)EESGDEEGK ddPTM_A549_PD325901_60min_R1 1 RVESEESGDEEGK 13 1 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.88)EES(0.12)GDEEGK 50.843 0.02204 1739000.0 729.45 680.04 521.63 503.1 571.59 415.08 418.81 503.15 838.31 740.36 680.6 True False 803.5032270072917 737.3493574005878 557.0309486160086 534.1753443769996 531.443490278451 411.6997260993355 434.7480437316256 493.1142785364606 803.0787460015525 693.613543249372 596.8905146788701 1.3461484262982135 1.2353175989021792 0.9332213109730749 0.8949301944668839 0.8903533851000633 0.6897407748568963 0.7283547535774163 0.8261385738417344 1.3454372724177275 1.1620448410418105 1.0 9.22132251755392 -11.735415468187838 4.450834717891125 0.9965051491719471 1.0653270111080746 0.0 0.23377367072391703 1.6128824814264668 56.00348145533571 0.2869366553499356 0.0381376398481077 1.839011867409293e-12 11.735415468187838 0.06882186193612749 RVES(ph)EESGDEEGKK ddPTM_A549_MK2206_60min_R1 4 RVESEESGDEEGKK 14 2 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.999)EES(0.001)GDEEGKK;RVES(0.996)EES(0.004)GDEEGKK;RVES(0.998)EES(0.002)GDEEGKK;RVES(0.971)EES(0.029)GDEEGKK 126.19 1.0722000000000002e-07 71349800.0 12321.599999999999 12530.5 12185.8 12455.699999999999 13325.3 7881.4 6841.599999999999 8496.800000000001 10997.400000000001 17618.9 18012.9 True False 14401.184845802683 13168.248927907174 13913.92967650133 15507.347059157626 11365.166021918172 8715.404516750092 8084.630160895171 9701.247420358677 8506.506459239112 13638.778253142516 13539.799799250763 1.0636187432106334 0.9725586140967795 1.027631861829395 1.1453158310373053 0.8393895176018094 0.6436878422111062 0.5971011596007898 0.7164985866995983 0.6282593971374545 1.0073101859229285 1.0 13.724918786795932 -6.894995681042736 5.893637089436395 0.7797049644845765 1.043442733836459 0.5017443012855627 0.13334912192325638 0.17782583399420462 8.76158558341432 0.023722498803314625 0.04529822982429635 1.2735157457705584e-07 6.894995681042736 0.2637377693518824 RVES(ph)EESGDEEGKK ddPTM_A549_PD325901_60min_R1 2 RVESEESGDEEGKK 14 2 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.883)EES(0.117)GDEEGKK;RVES(0.5)EES(0.5)GDEEGKK 144.27 1.627e-13 174125000.0 26546.5 26535.0 27123.0 27664.0 33880.0 28840.0 29243.0 30611.0 31316.0 30622.0 33079.0 True False 29241.481137499577 28771.197574590606 28963.729883848686 29372.742450497535 31500.385679654835 28605.13660187151 30355.858367383622 30000.439591135044 29999.897424323495 28688.521694016792 29010.492705057804 1.0079622374838708 0.9917514282539063 0.9983880721473936 1.0124868525716757 1.0858273246135848 0.9860272589194728 1.0463751400572132 1.0341237529517948 1.0341050643063774 0.9889015669497788 1.0 14.82428717757096 -6.519346196950543 24.998104952293367 1.0228850332995483 0.9997442915954283 0.14753729219570533 0.02686002633740887 221.68395046663738 1568755.6334581932 0.0036539802230048588 0.007745471519626675 3.024501491767682e-07 6.519346196950543 -0.02314074170411995 RVES(ph)PVLPPVLVPR ddPTM_A549_PD325901_60min_R1 1 RVESPVLPPVLVPR 14 1 Q99717;Q15797 Q99717 SMAD5;SMAD1 Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1 1 RVES(1)PVLPPVLVPR 47.754 0.012977 3461000.0 292.47 350.31 307.48 255.42 305.43 239.03 253.4 204.01 216.37 282.59 199.65 True False 322.1613390949655 379.8318531130519 328.3474418274451 271.196713299092 283.97765047629827 237.08341893014392 263.04327566580037 199.9408605072511 207.27672134694322 264.747219172889 175.0943156856251 1.8399303131770046 2.1692985955924744 1.8752604305954734 1.5488607510595314 1.6218553375894216 1.3540326423606908 1.5022947754516722 1.1419037775403114 1.183800402287761 1.5120263506910876 1.0 7.45198843822196 -6.7049403167918555 0.36005875247287006 1.0193282080762245 2.2902737504615094 0.6763287880560778 0.18912535313860118 0.5129211141994299 0.09163940701683829 0.040957039644721346 0.24728794034038726 1.9726938162480234e-07 6.7049403167918555 1.270945542385285 RVESEES(ph)GDEEGK ddPTM_A549_PD325901_60min_R1 1 RVESEESGDEEGK 13 1 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.087)EES(0.913)GDEEGK 53.001000000000005 0.018397 1340300.0 357.47 355.09 469.44 282.61 319.11 318.43 433.58 380.65 525.17 257.15 528.17 True False 393.76009124449496 385.0146804884633 501.29902137204346 300.0661778461217 296.69681446973624 315.83681165512996 450.08012416407985 373.0576371358517 503.09893122786997 240.91350511450634 463.2084383454879 0.8500710666043733 0.8311909900943921 1.0822320576943925 0.6477994634940455 0.640525495454041 0.6818459801450345 0.9716578691262611 0.8053774634770439 1.0861178026567586 0.5200974014528185 1.0 8.85551772515779 -8.755579983541917 24.910791509827426 1.0406667442125304 0.8129117433559467 0.0 0.2018944006592349 102.64606818951816 436391.5221775814 0.02244803688239931 0.0251208806524803 1.755577541619763e-09 8.755579983541917 -0.22775500085658362 RVESEES(ph)GDEEGKK ddPTM_A549_MK2206_60min_R1 3 RVESEESGDEEGKK 14 2 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.002)EES(0.998)GDEEGKK;RVES(0.011)EES(0.989)GDEEGKK;RVES(0.123)EES(0.877)GDEEGKK 89.46799999999999 1.56e-05 132969000.0 9761.5 10802.400000000001 9176.8 8154.6 7755.099999999999 6481.9 7069.2 6492.2 7425.0 12921.800000000001 12295.900000000001 True False 11409.00255423832 11352.196019219056 10478.208230507431 10152.477366073905 6614.335063118846 7167.810355663011 8353.582134793049 7412.48923152864 5743.249355288554 10002.756405420141 9242.488680423889 1.2344080635341463 1.2282618255474467 1.133699871626661 1.0984571057768697 0.715644378026492 0.7755281724980456 0.90382389674833 0.8020014400697844 0.6213964175528913 1.08225790166306 1.0 13.174065656160208 -6.626841283602635 4.449840076616873 0.8129488982800315 1.1901304667714283 0.618178802489397 0.12491732234416324 0.1121998815574219 3.8961201180445832 0.020259250857814493 0.043354357631852476 2.3613410465111242e-07 6.626841283602635 0.37718156849139683 RVESEES(ph)GDEEGKK ddPTM_A549_PD325901_60min_R1 4 RVESEESGDEEGKK 14 2 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.01)EES(0.99)GDEEGKK;RVESEES(1)GDEEGKK;RVESEES(1)GDEEGKK;RVES(0.001)EES(0.999)GDEEGKK 174.65 2.9875e-23 349413000.0 28331.6 28673.0 26413.9 28099.9 33024.0 28335.699999999997 30198.4 28986.199999999997 28772.6 30985.9 30500.7 True False 31207.803175378438 31089.374337902253 28206.506093683984 29835.567003496802 30704.508166615167 28104.94345387139 31347.61663719856 28408.047501766 27563.387681411758 29029.444985913215 26749.307259867513 1.1666770609121564 1.162249699996763 1.0544761335185204 1.115377183926541 1.1478618069740338 1.0506793009940023 1.1719038677397817 1.0620105868830152 1.0304337010912288 1.0852410009685236 1.0 14.707213909355017 -8.596347935684754 2.5994198994436717 1.013477039748325 1.1208813497757237 0.38877466699965657 0.04519975613111683 0.13508982410192685 1.832544030698219 0.0067940258064463415 0.007779374516396536 2.533098421700585e-09 8.596347935684754 0.1074043100273987 RVESQLK ddPTM_A549_MK2206_60min_R1 1 RVESQLK 7 1 P00505-2;P00505 P00505-2 GOT2 Aspartate aminotransferase, mitochondrial 0 67.757 0.027327999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_A549_MK2206_60min_R1 7 RVGDPPQPLPEEPMEVQGAERASPEPQR 28 2 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR 116.59 5.1913e-21 258767800.0 5376.220000000001 5611.03 4446.06 5042.820000000001 6480.32 5287.2 4761.36 5385.88 7605.14 7497.48 7707.3600000000015 True False 6283.594500040687 5896.607460353137 5076.5781629031735 6278.311126380795 5527.0735124279945 5846.687994640685 5626.43747995788 6149.344983565737 5882.587932913024 5803.794060773994 5793.409799685407 1.0846107417400195 1.0178129399155111 0.8762677487753139 1.0836987790371257 0.9540277148576862 1.009196344950114 0.9711789213087267 1.061437943488765 1.0153930304105985 1.0017924264720839 1.0 12.500197003022993 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_A549_PD325901_60min_R1 8 RVGDPPQPLPEEPMEVQGAERASPEPQR 28 2 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR 206.39 1.4313999999999994e-78 409529900.0 13914.9 14758.060000000001 12754.67 14314.4 15741.2 15533.6 15213.479999999998 15098.7 16212.599999999999 16742.699999999997 19012.9 True False 15327.530404392022 16001.773509616085 13620.278606261414 15198.56797763887 14635.592416191941 15407.099511748665 15792.437306535689 14797.544583798986 15531.240802835202 15685.563064672944 16674.43383270334 0.9192234385991772 0.9596591806452837 0.8168360463039019 0.9114892973355488 0.8777264981247731 0.923995361181675 0.9471048591504316 0.8874391018168644 0.9314403690501317 0.9406953916425673 1.0 14.025350156214598 -10.111638492944122 0.4271795226514328 1.0128604607172385 0.8992695807275498 0.23254372825334424 0.03992240344915633 0.8807873253267327 0.28567137603091575 0.04221973453418888 0.01134858682733306 7.733240327663436e-11 10.111638492944122 -0.11359087998968864 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A549_MK2206_60min_R1 1 RVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSR 45 3 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 2 RVGDPPQPLPEEPMEVQGAERAS(0.998)PEPQRENAS(0.979)PAPGT(0.009)T(0.009)AEEAMS(0.005)R 51.75 0.0007535 22924000.0 713.03 767.15 821.38 669.75 989.77 428.24 630.21 709.26 971.51 683.8 982.13 True False 833.3720320902065 806.1946582374194 937.8640349984959 833.8387800662199 844.1761441403902 473.5560725572943 744.710999429629 809.7997770176532 751.4645361826782 529.3291050802744 738.2400155909461 1.1288632619340055 1.092049524831131 1.2704053088313763 1.1294955061447718 1.143498220513886 0.6414662745939372 1.0087654200558378 1.096932921428575 1.0179135786633648 0.7170149191337959 1.0 9.527946129376643 -7.043496307183949 24.999998366880117 0.9890920268843006 1.1561186160878554 0.3501290579290638 0.1434807316196354 413.8563557270193 237868.07865925916 0.017029012334372238 0.029496365834401437 9.046981303745973e-08 7.043496307183949 0.16702658920355473 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A549_PD325901_60min_R1 4 RVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSR 45 3 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 2 RVGDPPQPLPEEPMEVQGAERAS(0.996)PEPQRENAS(0.973)PAPGT(0.016)T(0.008)AEEAMS(0.007)R;RVGDPPQPLPEEPMEVQGAERAS(0.999)PEPQRENAS(0.942)PAPGT(0.028)T(0.03)AEEAMS(0.001)R;RVGDPPQPLPEEPMEVQGAERAS(0.997)PEPQRENAS(0.899)PAPGT(0.021)T(0.023)AEEAMS(0.06)R;RVGDPPQPLPEEPMEVQGAERAS(0.996)PEPQRENAS(0.858)PAPGT(0.063)T(0.06)AEEAMS(0.024)R 85.455 2.8409e-08 163568000.0 4514.3 4420.96 5085.52 5152.91 5415.9 5811.6 4579.32 5202.7 5132.700000000001 6132.599999999999 6589.3 True False 4972.588412747986 4793.52981456047 5430.653968916054 5471.1935475922955 5035.505867840695 5764.272256429842 4753.588528500052 5098.928067060807 4916.990468445052 5745.386589403938 5778.857873014223 0.8604794445574951 0.8294943256772276 0.939745203680438 0.9467603578107293 0.8713669687837816 0.9974760381887064 0.8225827028378888 0.8823418362426747 0.85085852195918 0.9942079759797197 1.0 12.49656867293189 -10.890752897954664 1.1262674388560485 1.0003550057880415 0.8879712631593173 0.40146303676104766 0.05077995825713047 0.4085980585767481 0.9156458476444723 0.03597037704600837 0.008509256385888942 1.2860181620580017e-11 10.890752897954664 -0.11238374262872419 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQRENASPAPGTTAEEAMSR ddPTM_A549_MK2206_60min_R1 2 RVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSR 45 3 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 RVGDPPQPLPEEPMEVQGAERAS(0.913)PEPQRENAS(0.046)PAPGT(0.012)T(0.012)AEEAMS(0.016)R;RVGDPPQPLPEEPMEVQGAERAS(0.918)PEPQRENAS(0.016)PAPGT(0.02)T(0.021)AEEAMS(0.026)R 63.42 2.4265e-05 53103000.0 2831.8999999999996 3253.83 3510.5299999999997 2830.98 4359.5 3740.0 2958.87 2793.5 4638.5 4140.299999999999 3808.7 True False 3309.8554866923614 3419.4360487683794 4008.375941443994 3524.570227087521 3718.2233249947285 4135.764317588924 3496.4583787663546 3189.487179734955 3587.887156162419 3205.0033544367657 2862.894675227549 1.1561219891644414 1.194398130799763 1.4001129612375278 1.2311211647377074 1.2987635756104774 1.4446093156606274 1.2213017855742276 1.1140777225698837 1.2532375665818882 1.1194974730189908 1.0 11.483258879790837 -10.78389910641585 0.4450616284231633 0.9259028638069078 1.2763743578578475 0.3685080995934754 0.09725652828343367 1.2371943651139754 0.3053909914133054 0.1971446932977259 0.025389550047519246 1.644753781556944e-11 10.78389910641585 0.3504714940509397 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQRENASPAPGTTAEEAMSR ddPTM_A549_PD325901_60min_R1 6 RVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSR 45 3 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 RVGDPPQPLPEEPMEVQGAERAS(0.982)PEPQRENAS(0.014)PAPGT(0.002)T(0.002)AEEAMSR;RVGDPPQPLPEEPMEVQGAERAS(0.922)PEPQRENAS(0.053)PAPGT(0.009)T(0.009)AEEAMS(0.008)R;RVGDPPQPLPEEPMEVQGAERAS(0.954)PEPQRENAS(0.016)PAPGT(0.008)T(0.009)AEEAMS(0.013)R;RVGDPPQPLPEEPMEVQGAERAS(0.99)PEPQRENAS(0.005)PAPGT(0.001)T(0.001)AEEAMS(0.002)R;RVGDPPQPLPEEPMEVQGAERAS(0.975)PEPQRENAS(0.016)PAPGT(0.004)T(0.005)AEEAMS(0.001)R;RVGDPPQPLPEEPMEVQGAERAS(0.995)PEPQRENAS(0.005)PAPGTTAEEAMSR 90.508 3.7115000000000006e-11 253439000.0 7831.320000000001 8513.45 8571.25 9877.23 9913.31 9722.25 8727.22 9698.800000000001 8559.310000000001 9565.51 11276.130000000001 True False 8626.349841286921 9230.908309455377 9152.946568113337 10487.3240642831 9217.033304662906 9643.07521940172 9059.339132818031 9505.349825438587 8199.591966502308 8961.542066139848 9889.237495277479 0.8722967615457068 0.9334297324605176 0.9255462387756638 1.0604785322722032 0.9320266915487085 0.9751080630844076 0.9160806520365439 0.9611812670064589 0.829142992108133 0.9061914096429937 1.0 13.27164357165349 -7.784982221475132 24.382994716337166 0.9208531975706429 0.9521881547831268 0.05136889318519533 0.05771560075724445 526.6085042345098 545399.0795722229 0.011459295751044351 0.015838747992974078 1.6406569346862924e-08 7.784982221475132 0.031334957212483916 RVGFQY(ph)EGTYK ddPTM_A549_MK2206_60min_R1 2 RVGFQYEGTYK 11 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 RVGFQY(0.997)EGT(0.001)Y(0.001)K;RVGFQY(0.996)EGT(0.002)Y(0.002)K 70.488 0.0011834 13413700.0 4450.9 4988.3 4896.2 3984.6000000000004 6325.0 4562.0 4362.0 4518.5 7117.2 6718.8 7323.3 True False 5202.1031059426705 5242.183163248022 5590.554783607628 4960.827178875494 5394.600878676838 5044.747811989487 5154.518937357451 5159.011212325894 5505.165563832958 5201.018413590742 5504.722497202174 0.9450254955788756 0.9523065269706892 1.0155924819914317 0.9011947798271175 0.9799950644957477 0.9164399866757182 0.9363812508218685 0.9371973273762682 1.0000804884589567 0.9448284479797496 1.0 12.426454121476016 -8.769180107331973 24.85299217314121 1.0000380139904494 0.9484769606452288 0.10684922575570865 0.033177307726890246 109.80186515142836 352537.2096215088 0.004647490948463642 0.0049919911522720555 1.7014527484103148e-09 8.769180107331973 -0.05156105334522065 RVGFQY(ph)EGTYK ddPTM_A549_PD325901_60min_R1 2 RVGFQYEGTYK 11 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 RVGFQY(1)EGTYK;RVGFQY(1)EGTYK 96.229 0.00011097 12887700.0 4076.9 4209.6 4749.700000000001 4769.299999999999 4527.6 5811.5 5814.200000000001 5217.200000000001 5433.8 5754.4 6004.1 True False 4490.783886744847 4564.357765592484 5072.043204266345 5063.8888291338135 4209.596995372059 5764.173070796686 6035.462562652319 5113.138853185778 5205.436282548509 5391.066201947954 5265.63376312578 0.8528477461142365 0.8668202102386616 0.9632350885822876 0.9616864857930781 0.7994473570970804 1.0946779305393552 1.1461986978504852 0.9710395905222474 0.9885678565420134 1.02382095764057 1.0 12.362391466794941 -7.265375641212195 24.9995996264028 1.0114001731491664 0.8957695814191993 0.5360284391869852 0.06632929173546401 268.74539846538534 1706829.2252955097 0.010322532365833588 0.016876356081762408 5.4278065252242304e-08 7.265375641212195 -0.11563059172996715 RVGFQYEGT(ph)YK ddPTM_A549_PD325901_60min_R1 1 RVGFQYEGTYK 11 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 RVGFQYEGT(1)YK 76.58800000000001 0.00075159 3039900.0 1358.3 1671.4 2057.8 1722.6 2008.7 2182.3 1517.8 2169.4 2043.9 2269.8 2348.9 True False 1496.19361607239 1812.2547437788098 2197.454682556643 1829.0010896915508 1867.615841638806 2164.5280723392602 1575.5607095720288 2126.1296151386223 1958.0019908537097 2126.4844406335087 2060.000190903905 0.7263075133094414 0.8797352309873392 1.0667254752012545 0.8878645243663814 0.9066095478463606 1.0507416853148395 0.7648352250300959 1.0321016592749441 0.9504863152437671 1.032273904644849 1.0 11.008428755767719 -5.387428609895514 3.429585474081581 0.9648642498777085 0.722621121083844 0.4078243671745695 0.0845144115502981 0.1701179459391098 3.2108278986082683 0.01019129654697223 0.08570898313966882 4.097994678473925e-06 5.387428609895514 -0.24224312879386445 RVGGYATS(ph)PSSPKK ddPTM_A549_MK2206_60min_R1 1 RVGGYATSPSSPKK 14 2 K7ESL7;C9JRL6;O95834-2;O95834-3 K7ESL7 EML2 1 RVGGY(0.001)AT(0.063)S(0.329)PS(0.329)S(0.278)PKK 42.647 0.016285 3587800.0 1765.1 1766.6 1796.1 1525.1 2747.8 1869.9 1456.6 1626.3 2584.2 2507.4 2480.4 True False 2063.005727448248 1856.5123942413145 2050.813987753291 1898.7495684643397 2343.602259988649 2067.771576860838 1721.2453654642045 1856.8330053348686 1998.8828261194196 1940.9765985350712 1864.4482244425708 1.1064966569747687 0.9957436038731358 1.0999575964982558 1.0183975846430513 1.2569950880182446 1.10905282847372 0.9231929012020804 0.9959155641825458 1.0721042289694271 1.0410461245795015 1.0 10.864533018819987 RVGGYATSPS(ph)SPKK ddPTM_A549_PD325901_60min_R1 1 RVGGYATSPSSPKK 14 2 K7ESL7;C9JRL6;O95834-2;O95834-3 K7ESL7 EML2 1 RVGGYAT(0.052)S(0.312)PS(0.398)S(0.237)PKK 51.147 0.0050100000000000006 5824500.0 2401.9 2370.9 2214.3 2747.6 2846.0 2353.3 2452.1 2138.9 2590.1 2871.3 2461.5 True False 2645.7391198146747 2570.7040636742745 2364.575713667593 2917.3130117476508 2646.106778166993 2334.13550503413 2545.4160073406065 2096.23796156541 2481.2471043153755 2690.005627980877 2158.751104734117 1.2255878475349005 1.1908292984942774 1.0953442981370596 1.3513892385972688 1.2257581582073593 1.0812434559571953 1.1791150919429934 0.9710419867155522 1.1493900796965564 1.246093457500369 1.0 11.075981200711144 -7.571054850455241 1.6403459437340395 1.0674521067792249 1.2144998073343853 0.2025232706683524 0.0954264978207503 0.29609758500648636 1.603196391654154 0.013835715730427602 0.023251983477132775 2.6850053138700615e-08 7.571054850455241 0.14704770055516048 RVGGYATSPSS(ph)PKK ddPTM_A549_PD325901_60min_R1 1 RVGGYATSPSSPKK 14 2 K7ESL7;C9JRL6;O95834-2;O95834-3 K7ESL7 EML2 1 RVGGYATS(0.002)PS(0.052)S(0.946)PKK 67.646 0.00075037 7106100.0 2225.9 2366.0 2368.6 2365.2 3259.5 2530.5 2432.4 2768.7 3146.6 2988.8 2960.9 True False 2451.8717293790264 2565.3911234777233 2529.3474395488697 2511.2930322410643 3030.5639646645504 2509.8924469846024 2524.966313060352 2713.476106496869 3014.3593445962542 2800.086657928201 2596.7280706915467 0.9442158218461655 0.9879321413868808 0.9740517184285944 0.9670989660354656 1.1670702061065126 0.9665596006424274 0.9723645465841623 1.0449596694867747 1.1608298067935494 1.0783133935092777 1.0 11.342479227594286 -6.2506543225375415 0.6007170647681327 1.068294778392892 0.932674568565911 0.2179756621278337 0.06666958192741856 1.815681076568285 0.8349764881999167 0.015031408330449168 0.13633617270751022 5.614947209333054e-07 6.2506543225375415 -0.13562020982698098 RVGKPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RVGKPSPK 8 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 RVGKPS(1)PK 44.309 0.019941999999999998 5609700.0 1480.5 1961.2 1827.8 1120.7 2068.4 1807.5 1777.4 1779.5 2393.1 2594.4 2506.7 True False 1730.3722052502005 2061.0167030375114 2087.0095244226186 1395.271550310135 1764.1410999929128 1998.768450278605 2100.3305729617464 2031.7495744901912 1851.0666709954278 2008.323238110946 1884.217208599497 0.9183507067830855 1.0938318011485662 1.1076268250271704 0.740504621198749 0.9362726823327154 1.0607951361214092 1.1146966301846284 1.0782990226484304 0.9824062016561724 1.0658660949199665 1.0 10.879749570051512 -7.245356596511697 23.834718446882018 1.0132849950959235 0.9628735117804235 0.11417295365009006 0.10041030735656258 1220.3001190121206 1808483.844598893 0.015222623003898041 0.026298634996858503 5.683860409288019e-08 7.245356596511697 -0.05041148331550005 RVGKPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 RVGKPSPK 8 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 RVGKPS(1)PK;RVGKPS(1)PK 67.77600000000001 0.0025771 27304000.0 6240.700000000001 6469.799999999999 6561.9 6768.7 7398.8 7318.7 6459.5 6095.4 8074.0 8019.700000000001 7425.200000000001 True False 6874.251269839478 7015.032751765077 7007.229993910213 7186.78722616696 6879.133812474335 7259.098933707249 6705.319807274031 5973.822465251207 7734.677858091323 7513.334773349435 6511.947472220903 1.0556367813413903 1.0772557336634345 1.0760575117969116 1.1036310192649483 1.0563865635925043 1.114735486530503 1.029695008425364 0.9173634294095175 1.1877672372337806 1.1537769316168958 1.0 12.668873347000883 -11.312372978963213 1.898176592509072 0.9995894647302691 1.0875729332068966 0.0 0.07868965955106628 0.5246921776189044 3.4123429565052934 0.05574699129333555 0.010869648494284782 4.871099726732118e-12 11.312372978963213 0.08798346847662752 RVGMADANS(ph)PPKPLSK ddPTM_A549_MK2206_60min_R1 2 RVGMADANSPPKPLSK 16 2 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RVGMADANS(0.999)PPKPLS(0.001)K;RVGMADANS(1)PPKPLSK 59.339 0.0020615 23254000.0 4634.3 4596.3 5361.5 5176.0 5812.1 5539.4 4504.4 5560.7 7911.0 7091.5 6175.7 True False 5416.456542243168 4830.232037615395 6121.8413202712945 6444.120232359471 4957.147789242316 6125.575631243875 5322.791174101998 6348.946253929536 6119.171131271081 5489.525224739351 4642.103249350904 1.1668108724209312 1.0405266272978302 1.3187645753306543 1.3881897679162003 1.0678667670598374 1.3195690190864244 1.1466335167892427 1.3676874280677185 1.3181893642987612 1.1825512983811681 1.0 12.180562896028231 -10.869151191002866 1.1286384676966676 1.0005952468612593 1.2423561750449277 0.1138481195508323 0.12430632869688682 0.4132247892461659 0.9383256252795884 0.0775009688270752 0.01895806039917142 1.3516019478933027e-11 10.869151191002866 0.24176092818366834 RVGMADANS(ph)PPKPLSK ddPTM_A549_PD325901_60min_R1 2 RVGMADANSPPKPLSK 16 2 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RVGMADANS(1)PPKPLSK;RVGMADANS(0.989)PPKPLS(0.011)K 60.602 0.0016039000000000001 32803000.0 6320.5 6225.9 6005.8 5602.799999999999 8162.900000000001 6987.6 6057.0 7037.3 6828.0 6478.8 7234.6 True False 6962.152507093822 6750.578442797946 6413.389703809253 5948.872231117974 7589.566064476231 6930.695302331399 6287.502449517575 6896.935530844948 6541.042905009605 6069.727462321073 6344.7900639079535 1.097302264845248 1.0639561553341697 1.0108119637072825 0.9375995377621491 1.196188682057288 1.0923443065132037 0.9909709204223703 1.087023441496961 1.0309313372270625 0.9566474857613396 1.0 12.631356713697802 -9.413357252557532 0.8511179614548229 1.0051993063513287 1.0583042913544163 0.15855210039195522 0.0651712660916746 0.8956032943668077 1.3868445735531054 0.01950162923834687 0.013929617298218037 3.8604928056073356e-10 9.413357252557532 0.05310498500308758 RVGMADANS(ph)PPKPLSKPR ddPTM_A549_MK2206_60min_R1 6 RVGMADANSPPKPLSKPR 18 3 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RVGMADANS(0.999)PPKPLS(0.001)KPR;RVGMADANS(0.999)PPKPLS(0.001)KPR;RVGMADANS(0.995)PPKPLS(0.005)KPR;RVGMADANS(0.999)PPKPLS(0.001)KPR;RVGMADANS(1)PPKPLSKPR;RVGMADANS(0.997)PPKPLS(0.003)KPR 72.316 0.00029832 109205700.0 8880.48 9566.4 10111.6 9644.400000000001 12736.100000000002 10107.5 9399.5 10131.3 13403.7 13937.2 13933.400000000001 True False 10379.287917109288 10053.2888986019 11545.57692698969 12007.27843295357 10862.636561409647 11177.06894118451 11107.267480901277 11567.442800804989 10367.783351310607 10788.776840194212 10473.352237722991 0.9910186997936629 0.9598921787803428 1.1023764564515222 1.1464599070492132 1.0371690281058752 1.067191161672847 1.0605264893980215 1.104464219119958 0.989920239096691 1.030116871400078 1.0 13.354435663525768 -8.786679740609532 24.970208972913046 0.9952400991343601 1.0593636581713666 0.16471193754038194 0.05032449398621098 229.67343242294 227214.09325455778 0.008911266585746593 0.009488578730738124 1.63425664453966e-09 8.786679740609532 0.0641235590370065 RVGMADANS(ph)PPKPLSKPR ddPTM_A549_PD325901_60min_R1 5 RVGMADANSPPKPLSKPR 18 3 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RVGMADANS(0.994)PPKPLS(0.006)KPR;RVGMADANS(1)PPKPLSKPR;RVGMADANS(0.999)PPKPLS(0.001)KPR;RVGMADANS(0.999)PPKPLS(0.001)KPR;RVGMADANS(0.999)PPKPLS(0.001)KPR 93.006 1.6149e-06 175472000.0 10356.8 9968.2 9956.7 10957.1 13259.9 12519.8 11619.699999999999 12473.800000000001 12994.2 11703.800000000001 13533.2 True False 11408.21471172681 10808.255197400944 10632.421536500984 11633.895181620388 12328.570368171653 12417.842899726453 12061.894042043818 12225.000273493206 12448.098962547725 10964.820070617003 11868.702194023055 0.9612015303132182 0.9106518152291208 0.8958369131424792 0.9802162857771498 1.0387462897485271 1.0462679656736134 1.0162774197938889 1.0300199696348922 1.0488171966111381 0.9238432215561667 1.0 13.534874568900756 -6.501197638621958 3.8939419023710102 1.0260688350639229 0.9220918155860685 0.5343950753290422 0.036645654896735144 0.07198231715846062 2.3959391052943695 0.0033620887142621018 0.007823523570092401 3.153569171323377e-07 6.501197638621958 -0.10397701947785443 RVGS(ph)FYR ddPTM_A549_PD325901_60min_R1 2 RVGSFYR 7 1 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 RVGS(1)FYR;RVGS(1)FYR 74.165 0.0078251 12230300.0 1037.01 1147.72 1414.95 1105.92 1277.6 1204.25 1203.87 1303.67 1433.6 1350.21 1552.2 True False 1142.2864917935867 1244.4423923236898 1510.977015785558 1174.2301666734477 1187.865783480728 1194.442987267815 1249.6839316329406 1277.667279140669 1373.3507774782915 1264.9575101717196 1361.2892402064979 0.8391210758562302 0.9141645695626865 1.1099603017183575 0.8625868272457111 0.8726035205424361 0.8774351195831287 0.9180149924959169 0.9385714963462548 1.0088603780266154 0.9292349287795991 1.0 10.41075792099481 -8.658554685015012 3.596305363978078 1.004349480472245 0.91665686679031 0.11400520175611806 0.07105579905266636 0.2435133556956396 6.103961284224123 0.011751744635033371 0.013242240095258694 2.195054537274259e-09 8.658554685015012 -0.08769261368193504 RVGT(ph)PSQGPFLR ddPTM_A549_PD325901_60min_R1 2 RVGTPSQGPFLR 12 1 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 RVGT(0.997)PS(0.003)QGPFLR;RVGT(0.999)PS(0.001)QGPFLR 65.374 0.0036579 7976200.0 1909.53 1776.0700000000002 1898.4 1806.54 2200.7 2201.43 2241.0 2649.7 2067.08 2238.08 2512.9 True False 2103.3840798783112 1925.7456520182075 2027.2368400065761 1918.1258728499786 2046.1304240028455 2183.502283961789 2326.282481322254 2596.8496548505627 1980.2078160643318 2096.7672468468763 2203.8292305855625 0.9544224437568773 0.8738180006381585 0.9198702022243052 0.8703604826678554 0.9284432730113049 0.9907765327995162 1.0555638563266336 1.1783352443149935 0.8985305161499224 0.9514200182787123 1.0 11.10579672194124 -7.109157856279591 4.248164458567431 0.9807275495992591 0.9030754259747977 0.2877883737141701 0.07239976571670081 0.33956045638900567 10.383567678331028 0.012312725707331523 0.02194714041921607 7.777538036359774e-08 7.109157856279591 -0.07765212362446139 RVGTEGLVDS(ph)FSQGLER ddPTM_A549_MK2206_60min_R1 2 RVGTEGLVDSFSQGLER 17 1 T1ECW5;O75170-6;O75170-2;O75170-4;O75170-3;O75170-5;O75170 T1ECW5 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 1 RVGTEGLVDS(0.897)FS(0.103)QGLER;RVGTEGLVDS(0.938)FS(0.062)QGLER 79.942 0.00012190000000000001 6693200.0 1628.48 1464.96 1352.13 1081.68 1879.3400000000001 1175.26 1559.3000000000002 1595.83 2054.3199999999997 1899.52 2468.0 True False 1903.3276114865578 1539.5202066499244 1543.8823658264328 1346.6916485584607 1602.8915755466437 1299.6252331255505 1842.6046260938729 1822.043789524407 1589.0198000749342 1470.4171127260659 1855.12748666516 1.0259821091369004 0.829872996716478 0.8322244034030071 0.7259294351674553 0.8640331120466852 0.7005584481214285 0.9932495956955505 0.9821663484700853 0.8565555798709069 0.7926232150057447 1.0 10.857302618710163 -7.787852803955476 24.999555228994385 0.9392366944736581 0.8267208791755521 0.1850320898150286 0.0972333713429238 230.2890354713599 217961.19190871078 0.014295365137937792 0.019755041996642894 1.6298483458470532e-08 7.787852803955476 -0.11251581529810595 RVGTEGLVDS(ph)FSQGLER ddPTM_A549_PD325901_60min_R1 1 RVGTEGLVDSFSQGLER 17 1 T1ECW5;O75170-6;O75170-2;O75170-4;O75170-3;O75170-5;O75170 T1ECW5 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 1 RVGTEGLVDS(0.969)FS(0.031)QGLER 123.99 1.7523e-10 5354000.0 676.18 538.09 577.43 900.88 832.08 512.52 581.73 746.28 894.28 785.74 769.7 True False 744.8252958225936 583.4367327270189 616.6178721686666 956.525311553073 773.6375713201652 508.3462070454644 603.8680534848705 731.3948599546653 856.6965215424713 736.1282423047726 675.0317795303066 1.1033929340939326 0.8643100227562317 0.913464952120795 1.4170078217926751 1.1460757771411436 0.7530700367902329 0.8945772210977201 1.0834969287869332 1.2691202807348843 1.0905090169487686 1.0 9.398811613555267 -8.515221800813189 24.451976402822734 1.12967531162802 1.0124178195583227 0.06833455870671623 0.1759400321483046 599.2361926977504 1913627.888650313 0.032747228709121605 0.037941357558427716 3.053361316767294e-09 8.515221800813189 -0.11725749206969738 RVHNNS(ph)PDTSR ddPTM_A549_MK2206_60min_R1 2 RVHNNSPDTSR 11 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RVHNNS(0.999)PDT(0.001)SR;RVHNNS(1)PDTSR 114.74 9.3021e-06 91019000.0 829.72 1011.73 695.26 606.9 866.99 548.78 658.63 751.6 1252.09 1144.15 1061.8 True False 969.7564512936144 1063.2227355517757 793.8583225462686 755.590527244776 739.4569194947079 606.8515353493182 778.2945455551895 858.1416016784646 968.4936141768686 885.685720353314 798.1257558108049 1.21504217127845 1.3321493859970255 0.9946531818658063 0.9467061070810603 0.9264917390662376 0.7603457612175741 0.9751527749715718 1.0751959768629322 1.213459917971184 1.1097069777601127 1.0 9.640472270797114 -5.763021910573319 24.99999117304566 1.042696786395023 1.2735958158183454 0.4098776247271585 0.11781998413055238 38.37661223582991 606306.8513372743 0.020196432641046407 0.06808853264485348 1.725750824008955e-06 5.763021910573319 0.2308990294233224 RVHNNS(ph)PDTSR ddPTM_A549_PD325901_60min_R1 2 RVHNNSPDTSR 11 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RVHNNS(0.999)PDT(0.001)SR;RVHNNS(1)PDTSR 101.97 0.00010001 158340000.0 949.3699999999999 1075.8899999999999 1241.23 1197.11 1179.27 970.6600000000001 772.0799999999999 1194.05 1083.67 1196.44 1347.37 True False 1045.7493435107447 1166.5590261362838 1325.467331922335 1271.05276586593 1096.4421434606434 962.7552667812971 801.4619268983872 1170.233736035896 1038.1271184639368 1120.8965742142718 1181.6520316821466 0.8849892485032697 0.9872271995975186 1.1217069800450978 1.075657411646402 0.9278891873945309 0.8147536169431894 0.6782554469588329 0.9903370067159315 0.8785387665995934 0.9485843075296997 1.0 10.206589543464673 -6.863736080093331 7.161848776170102 0.9136213863667694 1.0223321707548398 0.24563004250082787 0.1017320472961251 0.3097157364056241 19.16685497679054 0.016220968018836057 0.030827921086224612 1.36856024432648e-07 6.863736080093331 0.10871078438807047 RVHNNS(ph)PDTSRR ddPTM_A549_MK2206_60min_R1 1 RVHNNSPDTSRR 12 2 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RVHNNS(0.993)PDT(0.003)S(0.003)RR 41.967 0.018202 26862000.0 368.32 336.06 313.25 368.37 497.21 290.42 163.27 281.63 563.91 499.01 726.27 True False 430.4834114405631 353.1640185716836 357.6735603049485 458.6206665367577 424.071067650104 321.1520516348062 192.93404559888842 321.55191495570267 436.18528537922833 386.2832944225037 545.9171149677088 0.7885508617293054 0.6469187517459923 0.6551792396655398 0.8400921201451713 0.7768048592416597 0.5882798740497491 0.3534127073673089 0.5890123356449863 0.7989954398206197 0.7075859756574081 1.0 9.092538117289504 -9.44238878790292 1.2492069958883 0.9508670214918225 0.6578440690911739 0.15055157739945235 0.147776066169613 0.2643800857669398 0.8540194535401369 0.03534045273246936 0.027932749779942506 3.61086467079868e-10 9.44238878790292 -0.2930229524006486 RVHNNS(ph)PDTSRR ddPTM_A549_PD325901_60min_R1 3 RVHNNSPDTSRR 12 2 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RVHNNS(0.997)PDT(0.001)S(0.001)RR;RVHNNS(0.996)PDT(0.002)S(0.002)RR;RVHNNS(0.999)PDT(0.001)S(0.001)RR 70.27199999999999 0.00064801 186188000.0 2057.2799999999997 2106.97 2055.3599999999997 1890.8899999999999 2297.62 2075.2599999999998 2343.9 2343.0099999999998 2704.24 2173.23 2896.84 True False 2266.13355111051 2284.531756311857 2194.8490894837305 2007.685980777229 2136.243097558695 2058.359770610259 2433.098397131294 2296.2768274942136 2590.590197047917 2036.011886914247 2540.54704458175 0.8919864546273668 0.8992282828157426 0.8639277490116576 0.7902573522734172 0.84085949209824 0.8102033674204709 0.9577064917260191 0.9038513309137519 1.0196977861806946 0.8014068825281035 1.0 11.310923464151536 -8.316455874350506 1.3870672142897431 1.0093416973649891 0.8516914295059687 0.0 0.07485664110823613 0.14612321294503844 0.5457778689309871 0.007598496299583166 0.009678359950956925 4.8255200633083415e-09 8.316455874350506 -0.15765026785902048 RVIAIDSDAES(ph)PAKR ddPTM_A549_MK2206_60min_R1 1 RVIAIDSDAESPAKR 15 2 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 RVIAIDS(0.006)DAES(0.994)PAKR 51.089 0.0045443 7143900.0 1583.8 2115.9 1518.5 1380.1 2016.9 1475.5 1268.4 1266.1 1765.1 2098.5 2069.8 True False 1851.1067198076776 2223.590272260386 1733.8461335133738 1718.2245619550424 1720.216681771275 1631.636430642368 1498.8518615644637 1445.5735522686318 1365.3076682854999 1624.4473925284542 1555.811536426073 1.1898013843372963 1.4292156988167724 1.114431981585811 1.1043911950299945 1.105671632775564 1.048736554808223 0.9633890908197955 0.9291443844087479 0.8775533773337428 1.0441157906953484 1.0 10.603451594387936 -6.562514262222379 0.7149525355457452 0.940152843566665 1.319811302292608 0.6721969778154275 0.08132955803425895 0.34619635597426357 0.2840625629411455 0.013846144772691344 0.07484893284891615 2.738329706093207e-07 6.562514262222379 0.37965845872594295 RVIAIDSDAES(ph)PAKR ddPTM_A549_PD325901_60min_R1 3 RVIAIDSDAESPAKR 15 2 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 RVIAIDSDAES(1)PAKR;RVIAIDS(0.052)DAES(0.948)PAKR;RVIAIDSDAES(1)PAKR 105.77 1.0247e-06 26609000.0 7925.0 8293.4 7631.2 7927.700000000001 9429.5 9055.8 9291.1 8438.9 8945.9 10318.199999999999 10917.9 True False 8729.540165923358 8992.313923689828 8149.099122133475 8417.376023886978 8767.20445000901 8982.052567240924 9644.677894785009 8270.57951931102 8569.934933205248 9666.707091084967 9575.06751427041 0.9116948943611205 0.939138435346585 0.8510748472518119 0.8790931250711245 0.9156284733180855 0.9380667607674126 1.0072699623695451 0.8637620055404083 0.8950260580860511 1.0095706454996771 1.0 13.225066944248999 -10.78415162753246 0.9113847220554627 1.0029467435563095 0.9108526857657157 0.43656897642958925 0.04066753593441048 0.5301315215881017 0.7413390953610007 0.033654305069948674 0.007477448604349015 1.643797715215788e-11 10.78415162753246 -0.09209405779059388 RVIISAPSADAPMFVMGVNHEK ddPTM_A549_MK2206_60min_R1 1 RVIISAPSADAPMFVMGVNHEK 22 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 50.531000000000006 0.0018746 4063500.0 1154.9 1443.3 1768.9 1656.5 1816.0 1356.9 1582.6 1288.7 2489.9 1740.9 2128.2 False True 1349.8188854059158 1516.7578051672654 2019.756618749955 2062.3425743631105 1548.8688056406525 1500.4862573626765 1870.137934493788 1471.3771714782292 1925.9416255532622 1347.62948089244 1599.7092046680689 0.843790159778443 0.9481459509898766 1.2625773564696363 1.2891984170279471 0.9682189744992025 0.9379743849595585 1.1690486802455022 0.9197778991235673 1.2039323271587254 0.8424215332136354 1.0 10.643593960329728 -8.785122947408421 24.996151830923182 1.0963013277667537 1.053045198096119 0.0 0.16276886095841503 1074.5575103866552 1134105.0186064485 0.02711603417945528 0.028874655535633547 1.64012539310541e-09 8.785122947408421 -0.043256129670634635 RVIISAPSADAPMFVMGVNHEK ddPTM_A549_PD325901_60min_R1 3 RVIISAPSADAPMFVMGVNHEK 22 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;; 91.583 3.1574e-07 12532200.0 4438.9 4722.4 5299.0 5415.4 5659.700000000001 5630.4 5745.1 5594.0 6162.200000000001 5806.2 6114.0 False True 4889.533860254533 5120.37322126424 5658.622005475583 5749.896958734252 5262.182196905035 5584.547889153168 5963.732924339347 5482.423281591896 5903.224163627742 5439.595541107706 5362.016759839279 0.911883360170827 0.9549342067736688 1.055315986301616 1.0723384905843896 0.981381154254871 1.041501386377718 1.1122182550802218 1.0224554541967201 1.100933553181338 1.0144682093964124 1.0 12.388560013363245 -5.6498946178128815 3.6177104456415536 1.0484550897409726 0.9199095942267793 0.5591023813969418 0.03858775959231879 0.13441643457080366 3.2478725882275494 0.00608273595948884 0.028273956702669762 2.239264433418734e-06 5.6498946178128815 -0.12854549551419325 RVKS(ph)PGGPGSHVR ddPTM_A549_MK2206_60min_R1 2 RVKSPGGPGSHVR 13 2 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 RVKS(1)PGGPGSHVR;RVKS(1)PGGPGSHVR 84.14 8.2137e-05 9972800.0 1254.04 1318.93 1284.06 1246.05 2048.82 1712.05 1366.1100000000001 1234.5500000000002 2184.58 2612.05 2386.58 True False 1465.6912936656274 1386.0579033944853 1466.1590162655145 1551.3323059373101 1747.4412920554425 1893.217994633187 1614.3145037857373 1409.55124315081 1689.7761180574114 2021.9860908524884 1793.9263197428434 0.8170298175210072 0.772639259561772 0.8172905431677295 0.8647692432316235 0.9740875490950686 1.055348803235451 0.8998778188488515 0.785735304531831 0.9419428766169383 1.1271288394622232 1.0 10.808904921672593 -2.0410412153663664 0.19428900071248748 0.9924700643383896 2.194080958069208e-16 0.42809960062344354 0.08377942456008483 36.30653113107377 0.40320904626992643 0.06616280873567709 10.97265590658424 0.009098269242419603 2.0410412153663664 -0.9924700643383894 RVKS(ph)PGGPGSHVR ddPTM_A549_PD325901_60min_R1 1 RVKSPGGPGSHVR 13 2 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 RVKS(1)PGGPGSHVR 52.861999999999995 0.0047617 7609200.0 445.08 483.96 528.66 273.67 510.38 503.86 352.77 651.1 557.24 432.26 691.7 True False 490.2641939494215 524.7450076577675 564.5380466908321 290.5739743503349 474.53266951541457 499.7567312142508 366.1948553931509 638.1132997219313 533.8211406542991 404.96702983004707 606.6252850475679 0.8081829195612542 0.8650233028394458 0.9306206988166746 0.47900076292987 0.782250066411598 0.8238310263889889 0.6036590699717307 1.0519068615346199 0.8799849821829304 0.6675736073188773 1.0 9.244661822673311 -8.27166444551845 24.959912381815546 0.9498862551662197 0.7599395898898076 0.14636879246151302 0.1501327855389445 583.5941120476155 1424580.3433873658 0.020341866561750698 0.0247321522639118 5.34977546274487e-09 8.27166444551845 -0.18994666527641213 RVKS(ph)PS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RVKSPSPK 8 2 O15042-2;O15042;E7ET15;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 2 RVKS(1)PS(1)PK 48.44 0.029338999999999997 16284000.0 2258.4 1629.9 1193.4 1327.6 1400.4 1301.2 1308.5 1352.2 1528.4 2401.8 2513.2 True False 2639.562707421178 1712.8549481342245 1362.6420650213115 1652.8620595982281 1194.403015098662 1438.8921203333448 1546.2375125016572 1543.8784909388228 1182.21984035327 1859.2317118774545 1889.103079208622 1.3972571091922292 0.9067027453323347 0.7213169466602881 0.8749454054622794 0.6322593130275443 0.7616800460333386 0.8185035160439222 0.8172547638774589 0.6258101282903643 0.9841875397589839 1.0 10.883485709419487 -5.277205450643793 3.214168703108502 0.8007985329174598 1.4725383740024747 0.6838006525769726 0.11557069019883569 0.1630874238522555 2.6751442323900942 0.019080787982545457 0.26720455716044916 5.281953205754479e-06 5.277205450643793 0.6717398410850148 RVKS(ph)PS(ph)PK ddPTM_A549_PD325901_60min_R1 1 RVKSPSPK 8 2 O15042-2;O15042;E7ET15;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 2 RVKS(1)PS(1)PK 56.358999999999995 0.0059918 7474000.0 2066.3 1622.0 1652.8 1513.5 1764.8 1542.5 1427.1 1611.9 1816.9 2155.6 2335.5 True False 2276.0692548703373 1758.6916324094952 1764.9689470937983 1606.9854575921065 1640.8465362294835 1529.9383914142459 1481.4090714390838 1579.7493899889116 1740.5420114399462 2019.4950481230035 2048.2483059543083 1.1112272121762523 0.8586320453906566 0.8616967688746477 0.7845657447490914 0.8010974701941664 0.7469496676582996 0.7232565832631674 0.7712684958149563 0.8497710001175872 0.9859620253327107 1.0 11.000174906276468 -10.219559704622394 0.8979966017501262 0.9896734360710079 0.82725690328913 0.2723353026030574 0.09864359831399908 0.5231353243453536 0.8278755518554519 0.046899420798036905 0.019332967429118275 6.031707813393925e-11 10.219559704622394 -0.16241653278187784 RVLEKS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 RVLEKSPGK 9 2 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 RVLEKS(1)PGK;RVLEKS(1)PGK 50.786 0.00563 19181100.0 5440.1 5845.1 5701.700000000001 5063.3 7364.9 6370.4 6221.0 6498.1 9134.5 8235.1 7923.400000000001 True False 6358.2558823246345 6142.590623559333 6510.286795820357 6303.808727300172 6281.532966224038 7044.511499670715 7351.27517407169 7419.2255745966395 7065.5503347991025 6374.785190474661 5955.801105284734 1.0675735757332112 1.031362618558376 1.0931001020238258 1.0584317064763364 1.0546915276687587 1.1827983129624562 1.2343050152478592 1.2457141270237133 1.1863308075431969 1.070348904838033 1.0 12.540079860407051 -7.206992495661957 24.859536632178038 1.1213005902005986 1.0610206875640231 0.2349859997791225 0.07107482075695443 631.1487960716058 288171.7647645401 0.014365404314551721 0.024881601897766743 6.208797625528068e-08 7.206992495661957 -0.060279902636575455 RVLEKS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 RVLEKSPGK 9 2 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 RVLEKS(1)PGK;RVLEKS(1)PGK 60.301 0.0016737000000000002 34867000.0 7089.4 7289.0 6772.799999999999 7255.4 8268.4 8701.099999999999 7672.8 8254.6 8554.2 7482.7 7287.5 True False 7809.11066905956 7903.269610747728 7232.442936154935 7703.549579791062 7687.656108431465 8630.24112644051 7964.792602717269 8089.955527391572 8194.696722031804 7010.241044994431 6391.183699268682 1.221856707068696 1.236589336596923 1.131628079628272 1.2053400343777552 1.202853253820749 1.350335326369673 1.246215564673669 1.2657992490995484 1.2821876365358564 1.096861141042869 1.0 12.641867439451495 -10.761765785313841 0.9542172357388166 0.9964709351888632 1.2390851462024146 0.598045574090555 0.05824619666773095 0.2459300915547499 0.38837352754149496 0.041537696942174206 0.009970692727994505 1.7307494994697596e-11 10.761765785313841 0.2426142110135514 RVLQALEGLK ddPTM_A549_MK2206_60min_R1 2 RVLQALEGLK 10 1 P39019;A0A075B6E2 P39019 RPS19 40S ribosomal protein S19 0 ; 121.73 5.7368e-12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RVLQALEGLK ddPTM_A549_PD325901_60min_R1 2 RVLQALEGLK 10 1 P39019;A0A075B6E2 P39019 RPS19 40S ribosomal protein S19 0 ; 106.62 3.2506000000000003e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RVLS(ph)PEELEDR ddPTM_A549_MK2206_60min_R1 1 RVLSPEELEDR 11 1 A0A494C179;A0A0A0MRH8;A0A494C1P7;A0A0A0MSH9;A0A494C1F7;Q86WJ1-5;Q86WJ1-3;Q86WJ1-4;Q86WJ1-2;Q86WJ1 A0A494C179 CHD1L Chromodomain-helicase-DNA-binding protein 1-like 1 RVLS(1)PEELEDR 48.527 0.012593 1170600.0 174.06 270.26 262.17 265.62 200.09 219.17 264.65 310.49 250.86 161.76 340.87 True False 203.43707264157382 284.01507962620724 299.34964822074505 330.696911924135 170.6570260576202 242.3624239267284 312.7334793149127 354.5029083357457 194.04061054110264 125.21830365280086 256.2225714665937 0.7939857580740031 1.108470178878199 1.1683188038715562 1.2906626845217315 0.6660499310454795 0.9459058292150799 1.220553979787401 1.383574078999382 0.7573127122658733 0.48870910527539846 1.0 8.001253762677376 RVNDAEPGS(ph)PEAPQGK ddPTM_A549_MK2206_60min_R1 2 RVNDAEPGSPEAPQGK 16 1 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RVNDAEPGS(1)PEAPQGK;RVNDAEPGS(1)PEAPQGK 178.85 9.085099999999999e-29 15582200.0 2016.9099999999999 2586.4 2825.0 2355.0 3197.2 2558.3999999999996 2192.76 2177.41 3853.7 3299.8 3507.3 True False 2357.315099284824 2718.0367125924035 3225.6274792066415 2931.975105719968 2726.896115305231 2829.128189871524 2591.15610845482 2486.06453553846 2980.843103094343 2554.37288818937 2636.3406134443744 0.894161811741388 1.0309884461557846 1.2235245562569266 1.112138200491987 1.0343489386003677 1.0731269606984783 0.9828609001586782 0.9429982312833322 1.130674499301468 0.9689085223521577 1.0 11.364321062284732 -6.821123881125673 24.996649488052846 1.0471371562223328 1.0740699124302893 0.0 0.0900223838126903 333.73720111062994 139772.0454468689 0.01368941288187927 0.025870568625126173 1.5096494700107432e-07 6.821123881125673 0.026932756207956432 RVNDAEPGS(ph)PEAPQGK ddPTM_A549_PD325901_60min_R1 4 RVNDAEPGSPEAPQGK 16 1 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RVNDAEPGS(1)PEAPQGK;RVNDAEPGS(1)PEAPQGK;RVNDAEPGS(1)PEAPQGK;RVNDAEPGS(1)PEAPQGK 170.47 4.6548e-28 568173600.0 11477.5 13381.400000000001 12680.9 11711.099999999999 16487.3 13775.900000000001 13139.3 13871.2 15324.599999999999 14612.600000000002 15532.4 True False 12642.687350711074 14509.09754002739 13541.502130446373 12434.468049162146 15329.288926097219 13663.713637785086 13639.32325160084 13594.52803425412 14680.560354732017 13689.957942198085 13622.013267996012 0.9281071088378839 1.0651213777713402 0.9940896300740807 0.9128216075355086 1.1253321094696285 1.0030612486545616 1.0012707360699389 0.9979822928372514 1.077708563771773 1.0049878584659513 1.0 13.733652322040795 -6.74637855541668 24.998957070504467 1.0343078488686153 0.9828307693844532 0.19442122921529903 0.052559547299051844 334.8381218907783 555783.8604827867 0.007515923350583695 0.015597473138160824 1.7931699179989812e-07 6.74637855541668 -0.051477079484162025 RVNNGNTAPEDS(ph)SPAKK ddPTM_A549_MK2206_60min_R1 5 RVNNGNTAPEDSSPAKK 17 2 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNT(0.003)APEDS(0.498)S(0.498)PAKK;RVNNGNT(0.001)APEDS(0.499)S(0.499)PAKK;RVNNGNT(0.005)APEDS(0.498)S(0.498)PAKK;RVNNGNTAPEDS(0.5)S(0.5)PAKK;RVNNGNTAPEDS(0.5)S(0.5)PAKK 49.973 0.0041026000000000005 80947300.0 3610.82 3858.6099999999997 3707.48 3381.5099999999998 4587.01 3980.88 3459.36 3661.54 5188.360000000001 5809.81 5528.73 True False 4220.238139926737 4054.9967675441435 4233.256412958948 4209.980101801752 3912.266905375405 4402.134079305721 4087.8809333188606 4180.574507995965 4013.204744108409 4497.369885911716 4155.793755814532 1.0155071179896833 0.9757454305499739 1.018639677928202 1.0130387476306797 0.9414006409489404 1.0592763592145362 0.9836582789026399 1.0059629408092645 0.9656891029525656 1.082192753097834 1.0 12.020908342454062 -8.726427005675014 24.99787194270966 0.9837976164113094 1.0010482275831958 0.0 0.04139551717390755 374.30210379411477 267241.1623480647 0.004717777230627938 0.005349362078873867 1.8774699488296305e-09 8.726427005675014 0.01725061117188642 RVNNGNTAPEDS(ph)SPAKK ddPTM_A549_PD325901_60min_R1 1 RVNNGNTAPEDSSPAKK 17 2 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.61)S(0.39)PAKK 80.362 5.629999999999999e-05 73582000.0 3090.5 3543.1 2940.4 3082.2 3443.9 3528.2 3287.6 4228.8 3258.2 4168.7 3648.1 True False 3404.2452848941452 3841.6894715105295 3139.953226061595 3272.580493815914 3202.0123448100176 3499.4675089709813 3412.711417043748 4144.453266570576 3121.2691846957077 3905.4875705652057 3199.406827211266 1.0640238859093218 1.2007505387675577 0.9814173050316665 1.022871010333009 1.000814375207489 1.0937863478966383 1.066670042714889 1.2953817661829055 0.9755774595931377 1.2206911410417252 1.0 11.64358873766041 RVNNGNTAPEDSS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 RVNNGNTAPEDSSPAK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.043)S(0.957)PAK 66.893 0.0010026 2684400.0 577.42 683.5 513.18 505.43 460.08 488.72 476.14 430.98 881.6 845.25 822.87 True False 674.8743794363867 718.2872305354579 585.9566406298279 629.2603726896147 392.4028414642907 540.4360260139196 562.6484747440114 492.07273482089477 681.9190076259109 654.3074379483801 618.5286689433386 1.091096360317956 1.1612836503804123 0.9473395010628124 1.0173503740167928 0.6344133443881441 0.873744505549228 0.9096562584644784 0.7955536412912364 1.1024856920389234 1.0578449646742552 1.0 9.27269665576672 -5.762744449457864 24.990043426078035 0.9768272209337091 1.1261900289553797 0.18021911777080457 0.13249736264481085 50.000454742033384 957536.2447037075 0.020712760896685938 0.07005027148436875 1.7268537202180934e-06 5.762744449457864 0.14936280802167057 RVNNGNTAPEDSS(ph)PAKK ddPTM_A549_PD325901_60min_R1 3 RVNNGNTAPEDSSPAKK 17 2 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.218)S(0.782)PAKK;RVNNGNTAPEDS(0.058)S(0.942)PAKK;RVNNGNTAPEDS(0.17)S(0.83)PAKK 121.44 2.4866e-10 95438900.0 5601.900000000001 5060.139999999999 5617.3 5356.73 6844.0 4963.639999999999 6514.299999999999 5726.1 6091.599999999999 6098.799999999999 6634.6 True False 6170.600764099181 5486.575756362875 5998.523757568974 5687.603046083486 6363.301050518236 4923.217761529597 6762.20525126174 5611.888443461454 5835.591236109622 5713.720727172277 5818.586260194581 1.060498287412659 0.9429396611161346 1.030924607684406 0.9774888249045716 1.0936163469896618 0.8461192360779676 1.1621732408648013 0.9644762821259241 1.0029225270803963 0.9819774893190641 1.0 12.506452949279117 -4.89601856394445 15.576063724607295 1.0027885884139933 3.4651157432076354 0.047320491338964765 0.07694199245552083 2709977.5744344536 4008016.1369785448 0.00874820622788346 231404715.61405012 1.2705197956006887e-05 4.89601856394445 2.462327154793642 RVNS(ph)ASSSNPPAEVDPDTILK ddPTM_A549_PD325901_60min_R1 1 RVNSASSSNPPAEVDPDTILK 21 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 RVNS(0.499)AS(0.327)S(0.087)S(0.087)NPPAEVDPDTILK 125.54 8.441499999999999e-16 10273000.0 4268.3 4628.6 3279.8 4643.7 5605.7 4235.3 5900.9 5271.3 4880.5 4843.0 5507.8 True False 4701.614673843616 5018.668366073114 3502.3869510395966 4930.530802392111 5211.974970615151 4200.809121009238 6125.4619785963805 5166.159786245151 4675.38955739593 4537.21215348845 4830.37551682087 0.9733435128327252 1.038980996114391 0.7250755016547256 1.0207344719313165 1.0789999561039163 0.8696651236287353 1.268112998102449 1.0695151480987297 0.9679143042015614 0.9393083700611818 1.0 12.237919634219292 RVNS(ph)GDTEVGSSLLR ddPTM_A549_MK2206_60min_R1 4 RVNSGDTEVGSSLLR 15 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 RVNS(0.999)GDT(0.001)EVGSSLLR;RVNS(0.998)GDT(0.002)EVGSSLLR;RVNS(0.989)GDT(0.011)EVGSSLLR;RVNS(0.994)GDT(0.006)EVGSSLLR 120.71 2.3514e-07 41445900.0 3909.91 4413.93 3930.04 3298.67 4933.93 3872.63 3323.8199999999997 3988.91 5503.81 5083.2699999999995 5283.1 True False 4569.807219878296 4638.580183580649 4487.378767568587 4106.844298082923 4208.155432937549 4282.429136156254 3927.715069777037 4554.350208024542 4257.205822778547 3934.9557765156574 3971.160463857663 1.1507485687040446 1.168066671139912 1.129991801743881 1.0341673008331307 1.0596790210913978 1.078382295334452 0.9890597737170201 1.1468562525928143 1.0720306725261397 0.9908830963463924 1.0 11.95534494210832 -2.0000000000000004 0.17145232026533885 1.011495576555616 1.6189935937636206 0.4934803706119103 0.04531425972326806 36.969828445616535 0.3771961115408573 0.05621048135161719 5.8343762023836945 0.00999999999999999 2.0000000000000004 0.6074980172080047 RVNS(ph)GDTEVGSSLLR ddPTM_A549_PD325901_60min_R1 2 RVNSGDTEVGSSLLR 15 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 RVNS(0.974)GDT(0.026)EVGSSLLR;RVNS(0.998)GDT(0.002)EVGSSLLR 146.18 4.9588e-14 49600000.0 3753.6000000000004 3673.3 4037.7 3779.8 3994.3 3659.3 3911.1 4060.2 4511.200000000001 5424.9 4888.7 True False 4134.662708745726 3982.86188244747 4311.722602662533 4013.2696614513643 3713.7541475869352 3629.4998740370465 4059.939050736038 3979.2161258347155 4321.609952120585 5082.3708881807715 4287.420892022619 0.9643706118144075 0.928964518006192 1.0056681420490186 0.9360568422192107 0.8661977074601945 0.8465462023544896 0.9469420318145474 0.9281141800747008 1.0079742719362075 1.185414498874434 1.0 12.065894336766299 -8.758628012686216 22.83172631531582 1.0037656381068398 0.9266318485186796 0.36639638283229226 0.06827359471236746 18.03962982464482 146501.98023544363 0.007402157664550459 0.008205553910605108 1.7432994266078631e-09 8.758628012686216 -0.0771337895881602 RVNSASS(ph)SNPPAEVDPDTILK ddPTM_A549_MK2206_60min_R1 1 RVNSASSSNPPAEVDPDTILK 21 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 RVNS(0.271)AS(0.271)S(0.384)S(0.073)NPPAEVDPDTILK 129.24 8.540599999999999e-18 5983100.0 1669.1 1907.1 1925.5 2009.5 2529.8 2267.6 2248.4 1989.7 3382.9 3136.4 3884.0 True False 1950.8032744229045 2004.163244117295 2198.564853526507 2501.827590209883 2157.6697712057958 2507.555926888943 2656.905176238994 2271.7460682006945 2616.6785513812342 2427.8850616755963 2919.4956070532735 0.6681987360110822 0.6864758553756317 0.7530632511365819 0.8569382958363297 0.739055666325729 0.8589003939005366 0.9100562336247804 0.778129640857254 0.896277612153121 0.8316111371464356 1.0 11.511503424979937 -3.0158251496458583 0.10268047914186576 1.1113105539069215 1.339137276504227e-13 0.4984942900537047 0.06847479695850472 24.35677322231343 0.21285040365521724 0.30942525835147994 3.7926135206415896 0.000964217146850494 3.0158251496458583 -1.1113105539067876 RVNSASSS(ph)NPPAEVDPDTILK ddPTM_A549_MK2206_60min_R1 1 RVNSASSSNPPAEVDPDTILK 21 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 RVNS(0.05)AS(0.364)S(0.07)S(0.516)NPPAEVDPDTILK 129.24 8.540599999999999e-18 8056200.0 1888.5 1249.8 1263.6 1402.0 2253.7 2016.2 1954.6 2214.4 3008.0 2945.4 3194.1 True False 2207.232630607906 1313.4094816725894 1442.7974806108007 1745.4900629381718 1922.1837154583375 2229.552945754757 2309.725519247793 2528.2979813155825 2326.6928027889535 2280.0320943308598 2400.916817324632 0.9193290724113671 0.5470449755673484 0.6009360550102381 0.7270098032314133 0.8006040449165781 0.9286256523619056 0.9620181351478663 1.0530552175201524 0.969085136977637 0.9496505992537986 1.0 11.22936970517664 -7.123799654714016 1.5996861007910912 0.9897068511831215 0.6757286227354424 0.6824434610855967 0.09018151198165936 0.1425359364216346 0.7155708899353935 0.012983477322534544 0.026644964781599185 7.519697067188128e-08 7.123799654714016 -0.3139782284476791 RVNSASSS(ph)NPPAEVDPDTILK ddPTM_A549_PD325901_60min_R1 1 RVNSASSSNPPAEVDPDTILK 21 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 RVNS(0.157)AS(0.236)S(0.063)S(0.544)NPPAEVDPDTILK 125.54 8.441499999999999e-16 9888200.0 2979.5 3343.0 3256.3 2967.2 4447.0 4160.6 3722.7 4779.8 3896.8 4070.7 3921.2 True False 3281.976646608029 3624.7263422595192 3477.292099722616 3150.477204999865 4134.6580613171545 4126.7174530425345 3864.3693856396067 4684.463139319437 3733.031047487028 3813.675307289991 3438.9172585348038 0.954363364940731 1.0540312748914122 1.0111589893861426 0.9161247474567527 1.2023139117568593 1.200004868625649 1.1237168838677067 1.362191290788809 1.0855251135287667 1.108975593357212 1.0 11.747738689233522 -6.749724221571465 24.999760853786647 1.0940393503882726 0.990873264300102 0.2935716360961348 0.10277870205527387 354.2038866064068 755854.5928694251 0.01719662170470505 0.035568654023318644 1.779408981932961e-07 6.749724221571465 -0.10316608608817057 RVPAT(ph)PR ddPTM_A549_PD325901_60min_R1 2 RVPATPR 7 1 Q15035 Q15035 TRAM2 Translocating chain-associated membrane protein 2 1 RVPAT(1)PR;RVPAT(1)PR 61.65 0.017211 27234000.0 1855.87 1707.8 1816.46 1736.4299999999998 1908.6999999999998 1874.34 1797.9 2206.9 2017.35 2351.0 2571.2 True False 2044.2765561807146 1851.7222995246213 1939.735898861327 1843.6853373813417 1774.6394966575322 1859.0759964754468 1866.3200683486298 2162.8816482204415 1932.567795023598 2202.557458775831 2254.95870017971 0.9065694001481247 0.8211779219624056 0.8602090578008098 0.8176137936514795 0.7869942347574266 0.8244390446385058 0.8276515521991124 0.9591668566027705 0.857030239564734 0.9767617733310581 1.0 11.138885295264005 -10.878733474581756 0.36902281768205303 1.0607745333828364 0.8346122515434541 0.6124758308202585 0.043341593750758876 1.4240207904675102 0.22427706462363028 0.12945001750700158 0.014908534196588998 1.3221067588216211e-11 10.878733474581756 -0.22616228183938236 RVPAVQRDS(ph)PVIVR ddPTM_A549_MK2206_60min_R1 2 RVPAVQRDSPVIVR 14 2 I3L2J0 I3L2J0 CIC 1 RVPAVQRDS(1)PVIVR;RVPAVQRDS(1)PVIVR 119.8 5.117199999999999e-07 19398500.0 854.84 978.3800000000001 957.91 1092.44 1252.24 1102.42 1236.5700000000002 1191.31 1693.26 1825.1399999999999 1610.98 True False 999.1160931685795 1028.1753630011428 1093.7560419847196 1360.087849041495 1068.0371548322976 1219.077352672829 1461.238762578658 1360.1818407338628 1309.7393135805935 1412.8396063852194 1210.9292052138728 0.825082167369245 0.8490796642562995 0.9032369830336545 1.12317701413542 0.8819980146103275 1.006728838832091 1.206708663303381 1.1232546336130602 1.0815985839149604 1.1667400540857262 1.0 10.241898807603176 -6.077520474207524 4.258014573362573 1.0483076303549799 0.8432318858793004 0.5380690598194808 0.08735270017413849 0.13365386879523097 4.489050501629429 0.011717216518063888 0.033738542910804026 8.36526157967405e-07 6.077520474207524 -0.20507574447567944 RVPAVQRDS(ph)PVIVR ddPTM_A549_PD325901_60min_R1 4 RVPAVQRDSPVIVR 14 2 I3L2J0 I3L2J0 CIC 1 RVPAVQRDS(1)PVIVR;RVPAVQRDS(1)PVIVR;RVPAVQRDS(1)PVIVR;RVPAVQRDS(1)PVIVR 139.08 2.9024e-10 59018000.0 8083.35 8253.14 7633.62 7779.219999999999 9155.6 8483.5 7546.620000000001 7639.460000000001 7695.64 8909.21 9022.4 True False 8903.965741352242 8948.661072197343 8151.683357886113 8259.724751509524 8512.542241105315 8414.413188695458 7833.810753768921 7487.084977259567 7372.219013108982 8346.680960144711 7912.70199770591 1.1252750001116842 1.130923554911051 1.0302022444734416 1.0438564164180864 1.0758072581999567 1.06340579882005 0.9900297971590664 0.9462109124582551 0.9316942575679423 1.05484586207905 1.0 12.949954709202284 -7.788947396475958 2.9241419795953734 0.9652084885018382 1.0786153156150529 0.5431673963741288 0.04182231934640576 0.11966650331761028 2.107007384058832 0.0061325442761782315 0.008974514292108495 1.62574566078949e-08 7.788947396475958 0.1134068271132147 RVPGS(ph)SGHLHK ddPTM_A549_MK2206_60min_R1 1 RVPGSSGHLHK 11 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 RVPGS(0.5)S(0.5)GHLHK 47.532 0.0070488 24339000.0 1455.4 1065.0 853.96 785.27 1157.5 1370.7 1585.8 865.19 2150.7 2314.7 1925.3 True False 1701.0359388862837 1119.203951017209 975.0643689002841 977.6611852521095 987.2332833309786 1515.7465642029786 1873.9193330723162 987.8333320332506 1663.5698839621678 1791.807662371033 1447.1948744231906 1.1754021306662426 0.7733609141362463 0.6737616240445269 0.6755560032243595 0.6821702458865194 1.0473686654032068 1.2948631633450232 0.6825848747059527 1.1495133885304962 1.2381246603607514 1.0 10.499043488103323 -7.278207713118451 21.62506098375682 1.057148798329987 0.7813017750132284 0.3187448340324497 0.19757706289130614 121.90945720717356 157218.79891685018 0.027672387048727952 0.044354883666622484 5.269777597298076e-08 7.278207713118451 -0.2758470233167586 RVPGS(ph)SGR ddPTM_A549_MK2206_60min_R1 2 RVPGSSGR 8 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 RVPGS(0.5)S(0.5)GR;RVPGS(0.739)S(0.261)GR 104.2 0.0016722999999999998 147012000.0 2291.19 2051.89 1638.25 1930.35 2369.97 2036.38 1751.93 1657.48 2427.2 2824.66 2485.25 True False 2677.886857782646 2156.322436669203 1870.57848418063 2403.285836656703 2021.350552480274 2251.868379960357 2070.233003650766 1892.4328658196132 1877.4430754419375 2186.567344188432 1868.0938355893807 1.433486266463578 1.1542902158278825 1.0013300448531621 1.286490962536938 1.0820390892422924 1.205436438501975 1.1082061105338483 1.0130288049596574 1.0050046949861098 1.1704804665224824 1.0 10.867351209056228 -2.0000000000023057 0.2109648726865877 0.9800933583485115 2.660455360281988 0.3117595769691053 0.1090223143201963 27.6246854259005 0.3149133457544961 0.06466037069313275 15.810597581362643 0.009999999999946909 2.0000000000023057 1.6803620019334766 RVPGS(ph)SGR ddPTM_A549_PD325901_60min_R1 1 RVPGSSGR 8 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 RVPGS(0.665)S(0.335)GR 76.92699999999999 0.0019081 153970000.0 1019.7 1148.3 873.97 954.92 1208.0 1333.8 768.01 1001.5 977.82 1120.6 1119.4 True False 1123.219193336535 1245.0712709592003 933.2828598085475 1013.9032396193282 1123.154247373762 1322.937975019981 797.2370408211979 981.5242968384487 936.7256258606465 1049.8451247572077 981.7208964612514 1.1441329173957016 1.2682538137338542 0.9506600737263458 1.032781560700279 1.144066762174796 1.3475703530287413 0.8120811563601721 0.9997997398002717 0.9541669421901922 1.069392663985782 1.0 9.939169113984565 -7.772427964116491 24.999995673146817 0.9684192767729488 1.139007232558749 0.3814157551188563 0.11435044166480791 176.90622490790844 402476.682846866 0.017019964409602663 0.023637480809604865 1.688775951415534e-08 7.772427964116491 0.17058795578580022 RVPGSS(ph)GR ddPTM_A549_MK2206_60min_R1 1 RVPGSSGR 8 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 RVPGS(0.002)S(0.998)GR 112.01 0.0011832000000000001 60195000.0 2145.8 1775.4 1399.8 1440.9 1771.4 1165.4 1218.3 1795.0 1870.5 1752.0 2280.2 True False 2507.9585802268707 1865.7602766534771 1598.312688634851 1793.9205646844591 1510.8294065593902 1288.7218544700897 1439.6493400693682 2049.4467469569495 1446.8347365747136 1356.2219831831553 1713.9634096814825 1.463250945767239 1.0885648235630678 0.9325243932318696 1.0466504445493592 0.8814828823213664 0.7518957797993959 0.8399533688627041 1.1957354138253231 0.8441456383503477 0.7912782592221098 1.0 10.743120595259208 -5.057733472141026 1.4363998120197596 0.9282031527986432 1.9127589957614497 0.6366485806776283 0.11974605388149374 0.9152874354287744 1.162775626303881 0.016497981543061545 1.477663738761187 8.755209202677402e-06 5.057733472141026 0.9845558429628065 RVPGSS(ph)GR ddPTM_A549_PD325901_60min_R1 2 RVPGSSGR 8 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 RVPGS(0.001)S(0.999)GR;RVPGS(0.163)S(0.837)GR 114.39 0.0010669 139085000.0 4841.9 4372.6 4633.8 4679.4 4609.3 4091.7 4470.3 5005.0 4825.4 4992.799999999999 5286.9 True False 5333.4461235816125 4741.094347641034 4948.2775333030295 4968.435910311529 4285.558669221757 4058.378551798811 4640.41971274202 4905.171348653458 4622.605218780516 4677.553755923419 4636.644816420394 1.1502813639495395 1.0225269640777181 1.0672108236065456 1.0715584451748639 0.9242801290374265 0.8752834673525803 1.0008141439491456 1.057913975054137 0.9969720351254516 1.0088229616722308 1.0 12.17886550000617 -4.364929971338777 0.7515488797907272 0.9934068415200514 1.58072855444596 0.41026594829716134 0.054130590441532414 6.810809404711913 1.0234856657076117 0.008823068553422908 4.642730890926005 4.315886635735558e-05 4.364929971338777 0.5873217129259085 RVPPPALS(ph)R ddPTM_A549_MK2206_60min_R1 1 RVPPPALSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RVPPPALS(1)R 50.207 0.01197 5398200.0 314.01 330.0 341.19 351.74 674.97 319.48 351.25 309.58 716.08 470.05 670.44 True False 367.00721119258077 346.79559045603656 389.57587243558015 437.91631579020856 575.6828071273521 353.28716154633946 415.06757834635596 353.46391304898765 553.8890233447853 363.86537853609684 503.9512447973218 0.7282593603676544 0.688153058527537 0.773042782327602 0.8689656396549411 1.1423382977432255 0.7010344059938256 0.8236264571849348 0.7013851373482431 1.0990924798043655 0.7220249623203839 1.0 8.977140355461206 -8.769720352408191 24.999909280732307 1.0467936831928686 0.8092525322876744 0.02415638526361119 0.15695994429916485 127.39382972006588 384595.5500598324 0.02209293066311183 0.023710661682868926 1.6993375247084956e-09 8.769720352408191 -0.23754115090519423 RVPPPALS(ph)R ddPTM_A549_PD325901_60min_R1 1 RVPPPALSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RVPPPALS(1)R 72.958 0.00101 7304100.0 796.06 798.11 889.38 1310.6 966.35 624.12 761.26 934.77 903.3 929.25 1129.7 True False 876.8754251716013 865.3695306672889 949.738675076405 1391.5527854114393 898.4769097265188 619.0373736463265 790.2301658774559 916.1252790371209 865.3374423103658 870.5769964132032 990.7540617583303 0.8850586225358248 0.8734453524535478 0.9586018485666022 1.4045390668818412 0.9068616969704433 0.624814368711945 0.7976047703251433 0.924674764806149 0.8734129646409092 0.878701415433166 1.0 9.952383166544404 -5.75123892288958 23.491310138631764 0.9371869582543213 0.8792519405397602 0.010570701861708387 0.17799723924945085 491.4746149457293 1131794.786047788 0.025041532095461286 0.0945100596256887 1.773213696219257e-06 5.75123892288958 -0.05793501771456111 RVPPPALS(ph)RDRER ddPTM_A549_MK2206_60min_R1 3 RVPPPALSRDRER 13 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RVPPPALS(1)RDRER;RVPPPALS(1)RDRER;RVPPPALS(1)RDRER 99.74700000000001 4.603e-05 59104000.0 3793.5 3988.0 3066.5299999999997 3007.94 3993.9 3630.1000000000004 3026.0699999999997 2655.05 5301.1 6302.8 5570.9 True False 4433.750057829543 4190.972165874768 3501.410065066032 3744.8854350315587 3406.4026006873364 4014.2347725346426 3575.8677489154657 3031.411468249613 4100.409314117194 4878.993102515292 4187.491780981741 1.0588080621354838 1.0008311383221893 0.836159268650586 0.8943027547038158 0.8134708744165509 0.9586251108040434 0.8539402429769349 0.7239205774724913 0.9792041462003467 1.1651349680670733 1.0 12.031870643466481 -8.964604346529667 24.99986606163056 0.9908255355478622 0.8900196218810411 0.27488017015096144 0.10162900430483172 192.69276272627806 136099.26323683426 0.015243430435254165 0.016167187837286063 1.0849148493354688e-09 8.964604346529667 -0.10080591366682112 RVPPPALS(ph)RDRER ddPTM_A549_PD325901_60min_R1 2 RVPPPALSRDRER 13 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RVPPPALS(1)RDRER;RVPPPALS(1)RDRER 139.34 1.5148e-09 159237000.0 8089.5 7836.6 9156.599999999999 8580.4 9046.6 9333.7 9119.4 9359.7 9959.2 10493.6 10970.3 True False 8910.740084824853 8497.017784550093 9778.021939108838 9110.391820497729 8411.198025075722 9257.689441778373 9466.44375732716 9173.013440957393 9540.649458050922 9831.032305151019 9621.022646461375 0.9261739019086744 0.8831719970719856 1.016318358080698 0.9469255146019787 0.8742519723897929 0.9622354901309128 0.9839332163726827 0.953434346642063 0.9916460867660452 1.0218282054212693 1.0 13.231974535057104 -8.17954050833451 0.833765770296997 0.9976663704739234 0.9326085092785716 0.37081019665482984 0.03765380739134703 0.4589647305158672 0.6365962696042886 0.00777694934063234 0.01094998410935865 6.613928439253971e-09 8.17954050833451 -0.06505786119535173 RVPS(ph)INQK ddPTM_A549_MK2206_60min_R1 2 RVPSINQK 8 1 Q92834-2;Q92834;A0A2R8YFT6;Q92834-4 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 RVPS(1)INQK;RVPS(1)INQK 107.55 0.00076085 34710000.0 4994.6 5076.9 4187.5 4175.200000000001 5863.1 4817.4 3719.6000000000004 4701.0 6677.2 6577.5 6926.0 True False 5837.566373753907 5335.292524806826 4781.350466965593 5198.124187431848 5000.645756801607 5327.174070468683 4395.403172717737 5367.381146208703 5164.82486129734 5091.638181727855 5206.083052124351 1.1212972046943965 1.0248189418779539 0.9184160949976692 0.9984712374710859 0.9605389900111342 1.0232595248926966 0.8442821846501634 1.030982620228952 0.9920750033347672 0.9780170870785867 1.0 12.345982611757973 -5.347160890109977 3.5462303877128782 0.9837879976464302 1.126662149641382 0.4071211836716405 0.051276379248115594 0.1799797650633393 3.688830040864224 0.006473720728308198 0.05783495862260516 4.496132588837101e-06 5.347160890109977 0.1428741519949518 RVPS(ph)INQK ddPTM_A549_PD325901_60min_R1 4 RVPSINQK 8 1 Q92834-2;Q92834;A0A2R8YFT6;Q92834-4 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 RVPS(1)INQK;RVPS(1)INQK;RVPS(1)INQK;RVPS(1)INQK 110.38 0.00066873 72187000.0 11195.8 11877.099999999999 12702.1 11118.9 13534.3 13465.1 12208.2 13124.7 12947.600000000002 13774.599999999999 14616.599999999999 True False 12332.389374087648 12878.024899686065 13564.140889932318 11805.689200145935 12583.697458800256 13355.44468993967 12672.789731583369 12862.917562372033 12403.457398491859 12904.869405212055 12818.85086226149 0.9620510845004073 1.0046161733263301 1.0581401590266528 0.9209631445905742 0.9816556565024466 1.0418597449524827 0.9886057547398321 1.0034376482403953 0.9675951090910541 1.0067103162268471 1.0 13.645979317822553 -6.230474735650445 24.982289634114622 0.9864613498518855 1.0079038107178127 0.055302205292881546 0.03472111136990063 1528.035605390688 1232817.4225603717 0.004659881711978008 0.012327932200928033 5.88200330710711e-07 6.230474735650445 0.02144246086592716 RVPS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 RVPSPGK 7 1 D6RIF6;H0Y9L2 D6RIF6 SLAIN2 1 RVPS(1)PGK 46.891000000000005 0.025433 3225100.0 1514.2 1685.4 1575.9 1527.0 1805.4 1578.8 1724.3 2237.9 2489.7 2596.2 2699.1 True False 1769.7599413643059 1771.1796610745569 1799.386316630706 1901.1150685496348 1539.828051598918 1745.8675680773772 2037.5829902992787 2555.1291782813155 1925.7869252339283 2009.7166168607923 2028.8389786296336 0.8723018238537978 0.8730015933895794 0.8869044490884584 0.9370458121983297 0.7589700650561164 0.860525446556933 1.0043098598566709 1.259404617712521 0.9492063912014785 0.9905747267426036 1.0 10.986438652984436 -7.762173236509421 24.835637221194357 1.0030968959669608 0.8646440554103093 0.47396624623385175 0.08832568233677353 15.949125327313686 539771.3248105337 0.014398150967569804 0.02054541005617635 1.7291264872480024e-08 7.762173236509421 -0.13845284055665152 RVPS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 RVPSPGK 7 1 D6RIF6;H0Y9L2 D6RIF6 SLAIN2 1 RVPS(1)PGK;RVPS(1)PGK 46.891000000000005 0.025433 23023000.0 5804.1 5593.6 5582.9 6280.9 6885.5 5105.5 5413.5 5491.6 5819.9 6193.7 6507.1 True False 6393.327959247411 6064.992302740906 5961.789166704972 6668.856928041136 6401.886233685467 5063.922500723128 5619.513704880869 5382.065729923143 5575.309842247424 5802.628724976548 5706.767951905489 1.1203062772357302 1.062771844563227 1.0446875038460834 1.168587365781082 1.1218059482421883 0.8873538478171843 0.9847103916332386 0.9431022560022039 0.9769645251452407 1.0167977345283596 1.0 12.478458186130736 -7.238618802194334 24.879186548267445 0.9783056974629079 1.101695761903303 0.696869489435624 0.04420705187593774 352.47254141386674 384268.6601569106 0.006376613842195756 0.01103964286989916 5.7727293685336206e-08 7.238618802194334 0.12339006444039513 RVPS(ph)PTPAPK ddPTM_A549_MK2206_60min_R1 8 RVPSPTPAPK 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RVPS(0.643)PT(0.357)PAPK;RVPS(0.972)PT(0.028)PAPK;RVPS(0.894)PT(0.106)PAPK;RVPS(0.998)PT(0.002)PAPK;RVPS(0.566)PT(0.434)PAPK;RVPS(0.998)PT(0.002)PAPK;RVPS(0.999)PT(0.001)PAPK;RVPS(0.654)PT(0.346)PAPK 128.01 1.2108e-06 3578594000.0 39146.799999999996 42676.200000000004 40195.4 35203.1 51902.8 38400.0 38465.90000000001 37908.1 53721.8 55318.50000000001 59657.799999999996 True False 45753.82279262987 44848.236295211835 45895.71213370003 43827.86108032723 44267.96687522339 42463.46251214298 45454.65611932557 43281.68926368732 41553.89807608631 42822.012429633185 44843.12178848167 1.0203085995761811 1.0001140533157857 1.0234727267691859 0.9773597227921982 0.9871740661595506 0.9469336838866127 1.0136371935417077 0.9651801109619577 0.9266504297379174 0.9549293341266079 1.0 15.452599095515943 -6.499446843061458 1.5620141030279087 0.9675257744137739 1.014352095687427 0.3860212414573092 0.023837856551533542 0.39614645039781105 1.8799883172605183 0.004541686861438919 0.013959871040954676 3.1663079906659186e-07 6.499446843061458 0.04682632127365316 RVPS(ph)PTPAPK ddPTM_A549_PD325901_60min_R1 6 RVPSPTPAPK 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RVPS(0.952)PT(0.048)PAPK;RVPS(0.998)PT(0.002)PAPK;RVPS(0.933)PT(0.067)PAPK;RVPS(0.962)PT(0.038)PAPK;RVPS(0.798)PT(0.202)PAPK;RVPS(0.962)PT(0.038)PAPK 116.6 6.4031e-05 7283789100.0 37885.700000000004 40161.2 39913.49999999999 42265.299999999996 46547.600000000006 42134.4 41797.6 41421.0 44058.3 42835.9 47134.200000000004 True False 41731.828374021774 43545.725269743656 42622.270129373406 44875.93158953924 43278.25715650242 41791.271416015814 43388.23054052432 40594.82566085408 42206.68286786537 40131.23396357956 41336.99220831152 1.009551642357541 1.0534323603009517 1.0310926812135948 1.085611922691273 1.046961930331268 1.0109896531759015 1.0496223412162136 0.9820459470365573 1.0210390406532523 0.9708310116358798 1.0 15.335145797726943 -8.240226740088168 24.944513451814036 1.0081210134304888 1.041918314369239 0.42762221160505365 0.024404084832688796 651.6128332586342 766249.5604565451 0.0034447514175570547 0.0044437459763680826 5.751395852634557e-09 8.240226740088168 0.03379730093875022 RVPSPT(ph)PAPK ddPTM_A549_PD325901_60min_R1 1 RVPSPTPAPK 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RVPS(0.457)PT(0.543)PAPK 53.251999999999995 0.013308 6473400.0 1596.7 3324.7 1741.4 4635.2 2253.0 2192.2 2271.4 2543.1 5065.1 3059.2 2693.9 True False 1758.7958085715866 3604.884137035663 1859.5818758888795 4921.505776697016 2094.757052428052 2174.3474500215934 2357.839369957771 2492.3758754766454 4852.231461359722 2866.0415899136615 2362.5673780390966 0.7444426029582134 1.5258333669313908 0.787102155550929 2.083117638228717 0.8866443648970874 0.9203324613016016 0.9979987838123584 1.0549438287534845 2.053796012957318 1.2131046998085797 1.0 11.206139758790188 RVPTTLSIKPLGAIS(ph)PVLNR ddPTM_A549_MK2206_60min_R1 2 RVPTTLSIKPLGAISPVLNR 20 2 Q8NEN9 Q8NEN9 PDZD8 PDZ domain-containing protein 8 1 RVPTTLSIKPLGAIS(1)PVLNR;RVPTTLSIKPLGAIS(1)PVLNR 136.71 7.1668e-18 59318000.0 2835.6000000000004 3064.7 2968.4 2705.1 3499.9 2964.0 3147.2 3001.6 4690.9 4177.700000000001 3995.5 True False 3314.1799562360475 3220.680139607925 3389.3637554962775 3367.8496214365523 2985.069346289496 3277.6485126560356 3719.0055019833517 3427.085992014475 3628.4186398280244 3233.9546684613383 3003.3070798098256 1.1035101866592698 1.0723779001019982 1.1285438569641362 1.1213803756790033 0.993927449629465 1.0913464476178645 1.238303444554476 1.141104089905946 1.208141073625339 1.0767978706546777 1.0 11.552336278661082 -5.752235119412782 24.26946015033844 1.10794030251026 1.0879440773951983 0.014073556214291516 0.07078750588616432 954.4880403035402 2516671.3711968497 0.012273612399722545 0.04617520136468101 1.7691509117422512e-06 5.752235119412782 -0.019996225115061828 RVPTTLSIKPLGAIS(ph)PVLNR ddPTM_A549_PD325901_60min_R1 4 RVPTTLSIKPLGAISPVLNR 20 2 Q8NEN9 Q8NEN9 PDZD8 PDZ domain-containing protein 8 1 RVPTTLSIKPLGAIS(1)PVLNR;RVPTTLSIKPLGAIS(1)PVLNR;RVPTTLSIKPLGAIS(1)PVLNR;RVPTTLSIKPLGAIS(1)PVLNR 183.49 2.4761999999999997e-44 129890700.0 11970.4 11822.7 13791.4 12752.400000000001 15358.3 14770.2 14084.5 15107.8 14504.5 14949.3 15265.3 True False 13185.62619585728 12819.040420769252 14727.367338425354 13540.086785198262 14279.585991258653 14649.9163882442 14620.493354834127 14806.463077160175 13894.926305757443 14005.398646736492 13387.764874709612 0.9849012377537205 0.9575190885661042 1.1000616963512961 1.0113776953744082 1.0666146384325699 1.0942764924053063 1.0920787369408633 1.1059697578892038 1.0378824572879894 1.0461341962461286 1.0 13.708627498289669 -5.734575297949328 24.999146244892735 1.0410556519944667 0.9712100959700871 0.36346413494448815 0.039035811546437794 232.9448334686562 216770.08841777546 0.006336066297417762 0.024527076206778183 1.8425729960870248e-06 5.734575297949328 -0.06984555602437958 RVQQEIDS(ph)DESPVAR ddPTM_A549_MK2206_60min_R1 3 RVQQEIDSDESPVAR 15 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 RVQQEIDS(1)DESPVAR;RVQQEIDS(0.985)DES(0.015)PVAR;RVQQEIDS(0.998)DES(0.002)PVAR 104.84 2.2755e-06 20206900.0 2610.81 3184.65 2918.52 2677.3199999999997 4103.110000000001 2800.7599999999998 2407.34 2613.74 3908.56 4284.6 4013.74 True False 3051.4508998238966 3346.7350822600506 3332.4100214563423 3333.263520189462 3499.5479543569513 3097.1345642059755 2844.7225168863097 2984.2456492430433 3023.2774006877617 3316.705884216063 3017.017584411434 1.0114130310643117 1.1092859052437172 1.1045378186307242 1.1048207134794414 1.1599362139745866 1.0265550258004779 0.9428922561090289 0.9891376386608685 1.002074835860643 1.0993326327804924 1.0 11.558907389787485 -7.477136372971822 8.257472993489877 0.9954742613329299 1.0989416037110589 0.4522138836343148 0.047875178959369706 0.15157270036525916 25.480155244665756 0.005210164875656127 0.008294505906086163 3.333217298479477e-08 7.477136372971822 0.10346734237812893 RVQQEIDS(ph)DESPVAR ddPTM_A549_PD325901_60min_R1 2 RVQQEIDSDESPVAR 15 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 RVQQEIDS(0.985)DES(0.015)PVAR;RVQQEIDS(0.966)DES(0.034)PVAR 147.1 4.3748000000000003e-14 23062000.0 1520.1100000000001 2005.56 2224.51 2321.8 2266.3 2316.9 2177.0299999999997 1941.44 2067.1 2246.4 2371.5 True False 1674.4304481541644 2174.575579713432 2375.4786256653106 2465.2123128096136 2107.12290631056 2298.031934565747 2259.878067966526 1902.7164561697844 1980.2269755338825 2104.561920626979 2079.8205341771086 0.8050841025168843 1.0455592412803125 1.1421555786327404 1.1853004969897498 1.0131272730914997 1.1049183796403736 1.0865735917261043 0.9148464614628895 0.9521143497688224 1.0118959237315441 1.0 11.0222433295558 -8.247735080619563 24.635761572614538 0.9720649412410021 1.0630468076330921 0.15297880994212487 0.09481670967610309 886.1015682833641 1592916.6704034493 0.015005101805119757 0.01931456605897654 5.652816911648479e-09 8.247735080619563 0.09098186639209005 RVQQEIDSDES(ph)PVAR ddPTM_A549_MK2206_60min_R1 2 RVQQEIDSDESPVAR 15 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 RVQQEIDS(0.04)DES(0.96)PVAR;RVQQEIDS(0.003)DES(0.997)PVAR 96.14299999999999 7.461e-06 5901300.0 487.95 747.11 549.1 801.05 1046.32 698.6700000000001 700.14 631.62 1011.33 1011.44 1246.75 True False 570.3040307678729 785.13470783518 626.9706367548197 997.3072859605007 892.4077140517223 772.6027956603888 827.3463752410466 721.1540692551248 782.2653697621515 782.9550015244126 937.1475664504811 0.6085530723063641 0.8377919720892394 0.6690201833735955 1.0641945000592374 0.9522595437469742 0.8244195720282149 0.8828346835223454 0.7695202922913748 0.8347301937997258 0.8354660776529733 1.0 9.872132427225859 -14.999999999999995 0.023870768311241703 2.113316859150799 6.3535474330569115e-15 0.11788042914484098 0.11955176361324589 1757.989375291768 3.2547085814950294 203.69254680017212 101.19410339514066 1.0000000000000123e-15 14.999999999999995 -2.113316859150793 RVQQEIDSDES(ph)PVAR ddPTM_A549_PD325901_60min_R1 2 RVQQEIDSDESPVAR 15 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 RVQQEIDSDES(1)PVAR;RVQQEIDSDES(1)PVAR 136.35 4.667099999999999e-10 9846100.0 998.0 1099.22 795.5699999999999 799.87 673.4200000000001 941.4 570.27 869.9 1006.28 886.3299999999999 898.95 True False 1099.3162253112307 1191.8551271129263 849.562164351049 849.2761532634275 626.1213023728803 933.7335505201747 591.9719369137175 852.5491620766517 963.9895510329621 830.3669725379759 788.3848489135621 1.3943903498730972 1.5117681786444381 1.0775982891119642 1.077235508056474 0.7941823124020079 1.1843626267132241 0.7508667089803762 1.0813870449838192 1.2227398235283098 1.0532507996345535 1.0 9.622756240880499 -5.768248508274908 24.187517858905622 1.063237437608176 1.4530793069239014 0.5626707527448598 0.14199793613088016 56.17389465633629 199547.3778227097 0.020724870023911334 0.06666055458236571 1.7051064283812557e-06 5.768248508274908 0.3898418693157255 RVQS(ph)LPSVPLSCAAYR ddPTM_A549_PD325901_60min_R1 1 RVQSLPSVPLSCAAYR 16 1 Q96AD5-2;Q96AD5 Q96AD5-2 PNPLA2 Patatin-like phospholipase domain-containing protein 2 1 RVQS(0.996)LPS(0.004)VPLSCAAYR 76.199 0.00019665 7647000.0 1418.5 1551.0 1471.1 1895.6 1656.3 1939.7 1148.2 1696.2 1750.0 1142.9 1873.5 True False 1562.5050757554923 1681.7082132349726 1570.9376924429387 2012.686906780044 1539.967201924803 1923.9037263054847 1191.8953793191492 1662.3679603568423 1676.4535857889293 1070.7370989514657 1643.0713770950094 0.9509660368608207 1.0235150077340365 0.9560982647147047 1.2249540311136842 0.9372491197841343 1.1709191415086262 0.7254069396707826 1.011744214847166 1.0203169558908272 0.6516680369933503 1.0 10.682179438805388 RVQT(ph)PLLR ddPTM_A549_MK2206_60min_R1 2 RVQTPLLR 8 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 RVQT(1)PLLR;RVQT(1)PLLR 113.69 0.00082881 436700000.0 2982.7 3637.8 3295.3 3158.0 4328.200000000001 3552.5 3181.4 3085.8 4545.4 4670.6 4823.799999999999 True False 3486.1068399863366 3822.9484816999093 3762.623091054738 3931.7101417680083 3691.5275135318693 3928.4231920413495 3759.4191992913793 3523.2215998661586 3515.87415751227 3615.508216127422 3625.9173298927894 0.9614413465100743 1.0543396701802206 1.0377023932771217 1.08433529616194 1.0180947820012818 1.0834287808093805 1.036818784669461 0.9716773106821861 0.9696509428184417 0.9971292468034082 1.0 11.824130316993653 -8.216519426522188 6.994910472061266 0.984227429848424 1.0427140841986016 0.3959134216639898 0.032438612326487995 0.17116899560070917 22.268643898746905 0.0049948179256512635 0.006433637270847207 6.074080921506559e-09 8.216519426522188 0.058486654350177525 RVQT(ph)PLLR ddPTM_A549_PD325901_60min_R1 2 RVQTPLLR 8 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 RVQT(1)PLLR;RVQT(1)PLLR 118.28 0.00076964 615070000.0 5217.4 5049.1 5032.6 5563.5 5456.1 5592.9 5721.5 6311.5 5836.7 5204.799999999999 5817.5 True False 5747.066607153121 5474.605376817991 5374.142499482244 5907.144759374752 5072.882358523165 5547.353276720082 5939.234813424937 6185.612181224033 5591.403796670999 4876.1680397432765 5101.984380170919 1.1264375150753776 1.0730345232132186 1.0533435814443255 1.1578131799723108 0.9942959406616647 1.087293269316956 1.164102900139802 1.2123933983931192 1.0959272667321815 0.9557395076893438 1.0 12.316842766768985 -10.298379043965165 0.9978761006062644 1.007279266808178 1.1050050532625333 0.3977619180521844 0.05869066743083789 0.4577010821783394 0.8937114112459523 0.02600936011296136 0.010841651647360055 5.0306135474540545e-11 10.298379043965165 0.09772578645435526 RVS(ph)ASSPTTK ddPTM_A549_MK2206_60min_R1 1 RVSASSPTTK 10 1 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 PHF20 PHD finger protein 20 1 RVS(0.382)AS(0.308)S(0.308)PT(0.002)T(0.001)K 41.052 0.038823 1973400.0 1259.6 842.39 727.76 608.19 840.53 662.23 794.19 857.93 992.99 1107.3 1372.3 True False 1472.1896857366794 885.2640528613958 830.9673112451056 757.1965773026872 716.8891504433578 732.3067390473034 938.4840428381282 979.5442048004331 768.07935047919 857.1601609467506 1031.520036446758 1.4272041586394009 0.8582131433053253 0.8055755408372972 0.7340590105365054 0.6949832529795558 0.7099297281416418 0.9098068963070192 0.9496123877289245 0.74460924009287 0.830968018710893 1.0 10.010556129349045 -2.8015093335363703 16.543833387759886 0.8725485097285677 0.9318817251203941 0.0 0.19797972923334697 0.0 0.0 0.02551337537351463 0.0 0.0015793946641897395 2.8015093335363703 0.059333215391826455 RVS(ph)ASSPTTK ddPTM_A549_PD325901_60min_R1 2 RVSASSPTTK 10 1 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 PHF20 PHD finger protein 20 1 RVS(0.382)AS(0.308)S(0.308)PT(0.001)TK;RVS(0.376)AS(0.376)S(0.247)PT(0.001)TK 41.052 0.038823 5189400.0 2620.1 2455.6 2767.2 2871.2 3581.1 3134.6 3327.3 3304.5 2582.7 3251.1 3043.5 True False 2886.0906231843232 2662.542029928948 2954.9988325253876 3048.5475030316834 3329.5758901243225 3109.0728568733157 3453.9222222684207 3238.5891551698987 2474.1581005811827 3045.8249911638013 2669.168794336089 1.0812694308837032 0.9975172928661526 1.1070857859554717 1.14213365205701 1.2474205067845845 1.1648093831572932 1.2940066696409607 1.2133324659130236 0.9269395423141787 1.14111366715622 1.0 11.38217482695409 -8.7647687547516 24.999986231520875 0.9654992200381086 1.1565232996542396 0.22870870007205857 0.09418296022726837 51.624588402325465 387643.7937944789 0.015083376042229596 0.01638126296551674 1.718823351425973e-09 8.7647687547516 0.191024079616131 RVS(ph)DPSQK ddPTM_A549_PD325901_60min_R1 1 RVSDPSQK 8 1 A0A2R8Y549;Q8NI35;A0A0U1RQT2;A0A2R8Y5I3 A0A2R8Y549 INADL InaD-like protein 1 RVS(0.918)DPS(0.082)QK 41.598 0.036565 23672000.0 4807.9 5072.9 4397.7 4614.0 5580.4 5183.8 4611.7 4697.0 4706.5 5231.7 5673.9 True False 5295.99446861109 5500.411086344097 4696.154367518396 4898.996300845707 5188.4519553348855 5141.584851483411 4787.200767119068 4603.3146502747795 4508.702172294626 4901.369569152494 4976.046269815516 1.064297673584019 1.1053778015910656 0.9437521503779149 0.9845158254582176 1.0426856331316317 1.0332670905156258 0.9620490862711673 0.925094824418794 0.9060812395664848 0.9849927640110567 1.0 12.280784185107096 -7.805744361622944 5.478742592791793 0.9518590705811903 1.0272589556659484 0.3907149810769971 0.045550721226027116 0.17724806112673733 12.346766439525167 0.00825298206542476 0.011602924442285868 1.5640680277124932e-08 7.805744361622944 0.07539988508475803 RVS(ph)EVEAVLSQK ddPTM_A549_MK2206_60min_R1 2 RVSEVEAVLSQK 12 1 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK 79.02199999999999 0.00039249 5471800.0 602.78 741.6800000000001 452.38 457.85 815.2 610.21 639.73 649.86 1213.98 959.69 979.56 True False 704.5145274439151 779.428344028585 516.5342863870794 570.0232705536678 695.2851598889105 674.7820171753846 755.9606602007528 741.9796451127826 939.0154683277038 742.8953624663485 736.308217519337 0.9568201341246244 1.058562603924919 0.7015191112864555 0.7741639397616771 0.9442854817393789 0.9164396119993913 1.0266905111389713 1.0077025183999073 1.2753021710002082 1.0089461787744323 1.0 9.52416599247801 -7.9905804407041865 1.5750117294133548 1.1267371597764677 0.8823470807648117 0.3411737313092772 0.11537253002880662 0.2849521647042089 1.4169803117623352 0.02315091241043838 0.03316484646386157 1.0219262602867593e-08 7.9905804407041865 -0.244390079011656 RVS(ph)EVEAVLSQK ddPTM_A549_PD325901_60min_R1 3 RVSEVEAVLSQK 12 1 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK 91.355 0.00011292 9407200.0 4052.8900000000003 4178.68 4032.4700000000003 3571.8700000000003 4559.43 4221.45 4172.63 4101.860000000001 4421.19 4829.349999999999 4270.87 True False 4464.336409220076 4530.832028678735 4306.137663411985 3792.496297594659 4239.1913659795955 4187.071910817284 4331.421718000749 4020.0451844530808 4235.382759402377 4524.424016817974 3745.5800652755615 1.1918945347365404 1.209647624591734 1.1496584209568042 1.0125257587613858 1.131785008490459 1.1178700863011033 1.1564087918334451 1.0732770664074236 1.130768181587591 1.2079368049725865 1.0 11.870973445934224 -14.999999999999241 0.16996974307326415 0.4814128650347562 1.1639215419816533 0.0 0.07838006560250071 34.18931716762807 0.36679601173782517 5.925308093987458 0.06806903386877537 1.0000000000017466e-15 14.999999999999241 0.6825086769468971 RVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_A549_MK2206_60min_R1 4 RVSEVEEEKEPVPQPLPSDDTR 22 2 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR 297.08 6.679299999999998e-157 582240000.0 15040.899999999998 16314.3 15040.3 15107.5 24924.3 19547.4 18664.4 22023.0 27428.1 20833.7 23427.4 True False 17579.43620530074 17144.62818599066 17173.24069929615 18808.838178201437 21257.968487020564 21615.89289348604 22055.479884093187 25144.82769260888 21215.67914367543 16127.352700366946 17609.730016652906 0.9982797117659657 0.9735883610809243 0.975213173799713 1.0680935006053232 1.2071717435143894 1.2274971207988223 1.2524598539123593 1.4278939920617917 1.2047702675516605 0.9158205540411961 1.0 14.104085170227838 -6.494416712597835 3.765150278460879 1.1525900348615463 0.983488525662907 0.303066986558573 0.12691946670668425 0.2672790951909999 8.077380476193674 0.01974882190906592 0.04633730461546372 3.203194332584486e-07 6.494416712597835 -0.1691015091986393 RVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_A549_PD325901_60min_R1 4 RVSEVEEEKEPVPQPLPSDDTR 22 2 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR 259.25 5.978999999999998e-111 647540000.0 25122.9 25669.6 26965.5 24930.9 29581.899999999998 23273.1 26092.100000000002 26817.699999999997 25136.7 29562.399999999998 32489.0 True False 27673.35831349853 27832.86727946902 28795.54098672426 26470.82507081801 27504.169396014826 23083.571589771705 27085.04914364498 26282.799935421328 24080.29191422891 27695.825018849246 28493.05896473966 0.9712315672299169 0.9768297364601102 1.0106159897524138 0.9290271396825389 0.9652936678385922 0.8101471877181657 0.9505841116309379 0.9224281593614241 0.8451283501721744 0.9720200647155156 1.0 14.798322894730255 -6.50196439269546 2.394447456708698 0.9198428584468179 0.9846489022744462 0.2027290746910977 0.0531468313219109 0.4351023190905348 4.937353944150572 0.009401426241081597 0.024010345009285367 3.148006404941522e-07 6.50196439269546 0.06480604382762833 RVS(ph)FADPIYQAGLADDIDR ddPTM_A549_MK2206_60min_R1 2 RVSFADPIYQAGLADDIDR 19 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RVS(1)FADPIYQAGLADDIDR;RVS(1)FADPIYQAGLADDIDR 90.09700000000001 2.2325e-06 5952000.0 636.65 363.84000000000003 452.5 269.48 452.84 282.22 361.29 450.07 766.31 774.09 656.52 True False 744.1009554019183 382.35790191371007 516.6713041915059 335.5026120974167 386.2278358735207 312.08433307752574 426.9317163864911 513.8688007815681 592.7420085456125 599.2225313711463 493.48796496977735 1.5078401262480419 0.7748069437460887 1.0469785301109589 0.6798597654108218 0.78264894645845 0.6324051552030021 0.8651309589943853 1.0412995599863086 1.201127586935 1.2142596656999414 1.0 8.946871090889756 -8.353300443498743 4.366181436309628 1.0957759195446115 0.8765193656448945 0.16649723971809727 0.22966138598565908 0.3109723494017863 10.492256069777255 0.036906412585568905 0.04494703553188273 4.4330186305317336e-09 8.353300443498743 -0.219256553899717 RVS(ph)FADPIYQAGLADDIDR ddPTM_A549_PD325901_60min_R1 2 RVSFADPIYQAGLADDIDR 19 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RVS(0.999)FADPIY(0.001)QAGLADDIDR;RVS(1)FADPIYQAGLADDIDR 106.45 5.8273e-10 9677300.0 660.03 611.95 496.35 748.26 561.51 614.93 658.12 650.86 805.79 852.89 628.48 True False 727.0357597115948 663.5211741387121 530.035295795019 794.4783207782423 522.0714747043386 609.9222139593917 683.165116737082 637.8780867102078 771.9254485102064 799.0383798448823 551.1809442629688 1.3190509709724754 1.2038173326655244 0.9616357410609951 1.4414110811479655 0.947187090080636 1.1065734770184605 1.2394570673167966 1.1572934321290247 1.4004937154393355 1.449684333541946 1.0 9.106382201016244 RVS(ph)FADPIYQAGLADDIDRR ddPTM_A549_MK2206_60min_R1 4 RVSFADPIYQAGLADDIDRR 20 2 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RVS(1)FADPIYQAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR;RVS(0.98)FADPIY(0.02)QAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR 217.41 2.5538999999999997e-67 44856400.0 4065.5099999999998 4481.84 3714.04 3379.38 5870.860000000001 4059.6899999999996 4085.8799999999997 3662.1899999999996 6263.69 5929.110000000001 4963.99 True False 4751.668695823534 4709.946512513586 4240.746719600931 4207.328251706133 5007.264271081212 4489.283701195875 4828.231507512622 4181.316647486506 4844.974216057558 4589.719933054267 3731.294283845618 1.2734639335191429 1.2622822415548876 1.136535045751002 1.1275787787421303 1.341964447232109 1.2031438315203173 1.2939830365072298 1.1206075772659445 1.2984701413216162 1.230061095133971 1.0 11.86546043337262 -10.886718376536564 1.0155393132590271 0.993337685815366 1.2308281218455401 0.0 0.0977285584144648 0.3186911501916783 0.5557853074773477 0.056883656467741864 0.012170554772340353 1.2980207152265953e-11 10.886718376536564 0.23749043603017417 RVS(ph)FADPIYQAGLADDIDRR ddPTM_A549_PD325901_60min_R1 4 RVSFADPIYQAGLADDIDRR 20 2 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RVS(1)FADPIYQAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR 234.15 9.317399999999998e-77 52939800.0 4373.24 4122.9 5293.7 4406.62 5541.65 5666.32 4917.41 5517.450000000001 5455.93 5974.48 5776.55 True False 4817.208105390868 4470.351252318809 5652.9623156040925 4678.80690923986 5152.423621654641 5620.175368582406 5104.5447284599995 5407.40013139421 5226.636235607656 5597.250313188862 5066.07097056748 0.950876553719354 0.8824099145650262 1.115847438467857 0.923557316196808 1.017045290440826 1.1093755695950815 1.007594397732689 1.0673755189790592 1.0316942391792412 1.1048503555728675 1.0 12.306651572562988 -5.740352650752317 24.99990856486136 1.0236305264173378 0.9166431966597421 0.3758510488100082 0.05850324405886323 174.63198250576582 207036.1354240746 0.006678131206475814 0.025810002139699677 1.8182238460448528e-06 5.740352650752317 -0.10698732975759562 RVS(ph)FADTIK ddPTM_A549_MK2206_60min_R1 2 RVSFADTIK 9 1 Q8NG31-4;Q8NG31-2;Q8NG31;E9PPJ1;Q8NG31-3 Q8NG31-4 CASC5 Protein CASC5 1 RVS(1)FADTIK;RVS(1)FADTIK 95.40100000000001 0.00038512 11253600.0 2125.5299999999997 2049.5 1844.0 1837.05 2398.7 1726.17 1489.29 1636.5 2468.1 2370.0 2422.3999999999996 True False 2484.26749978079 2153.810795877718 2105.5069280201933 2287.127332468308 2045.8544075386767 1908.8321636610883 1759.8747153179916 1868.4788865710573 1909.079290745816 1834.615353963515 1820.8512251611357 1.3643440306667258 1.1828592946615488 1.1563311153188076 1.2560758950890725 1.1235703275854563 1.048318576105616 0.966512085666006 1.026156811029801 1.0484542967407304 1.007559172661765 1.0 10.830397334659114 -7.0474047511469085 2.2179440571441766 1.019739826945955 1.231400453206414 0.7903976527423178 0.05370984292453353 0.10753129193214267 1.0479171769201365 0.007920870882391186 0.015634725628504594 8.965928038570575e-08 7.0474047511469085 0.211660626260459 RVS(ph)FADTIK ddPTM_A549_PD325901_60min_R1 2 RVSFADTIK 9 1 Q8NG31-4;Q8NG31-2;Q8NG31;E9PPJ1;Q8NG31-3 Q8NG31-4 CASC5 Protein CASC5 1 RVS(1)FADTIK;RVS(1)FADTIK 125.82 2.8951999999999997e-05 12666200.0 2331.6000000000004 2508.1 2472.8 2447.3 3158.4 3354.6000000000004 2830.5 3132.1 3350.7 3181.1 3386.3 True False 2568.302315566801 2719.4663891777154 2640.619078154373 2598.4641627784335 2936.5648798884863 3327.2812498140847 2938.216226409033 3069.627808415085 3209.8817313731247 2980.244803110078 2969.806567524331 0.8648045780664331 0.9157048876232695 0.8891552423077934 0.8749607436367638 0.9888067835799974 1.1203696854195286 0.9893628287240162 1.0336120345285538 1.0808386534241263 1.0035147863500242 1.0 11.53615325166074 -6.8976914246846395 4.235803246764857 1.040265549432984 0.8889183472855 0.7808707550190145 0.03748142672183925 0.07993285227515122 2.6072372751927997 0.005821287584835369 0.011313844166293038 1.26563528842621e-07 6.8976914246846395 -0.15134720214748398 RVS(ph)FGVDEEER ddPTM_A549_MK2206_60min_R1 2 RVSFGVDEEER 11 1 J3QTA6;Q9BRQ6;J3QTB2 J3QTA6 CHCHD6 MICOS complex subunit MIC25 1 RVS(1)FGVDEEER;RVS(1)FGVDEEER 74.85300000000001 0.00057365 7549400.0 732.02 659.05 399.65 635.49 965.73 716.45 816.23 579.0 1144.65 1312.83 973.28 True False 855.5670798292824 692.5928299698506 456.3263794920121 791.1850785282298 823.672396294795 792.26426345898 964.5284255477474 661.075023113133 885.3886026304444 1016.2607911999661 731.5877148385196 1.169466165814619 0.946698278172596 0.6237480075683546 1.0814630460311447 1.1258696388533547 1.0829381732221315 1.3184043498606914 0.9036169002086777 1.2102289099070953 1.3891168079883371 1.0 9.514887038658024 -6.4867963147664005 24.97319700167748 1.1034981828188104 0.9059705275737725 0.2288881932479605 0.17619203280138973 627.7169676975956 434452.05781968456 0.021409441481518993 0.049734101578675534 3.2598955509794903e-07 6.4867963147664005 -0.1975276552450379 RVS(ph)GDAAQDLDR ddPTM_A549_MK2206_60min_R1 2 RVSGDAAQDLDR 12 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR 169.02 5.5618e-16 372710000.0 900.22 1056.6200000000001 868.01 1053.3 1631.37 1255.45 1455.8600000000001 1081.01 2051.9 2116.07 2017.9899999999998 True False 1052.155127734101 1110.3974448110823 991.1068701685508 1311.3585472844343 1391.3976340627705 1388.300885699737 1720.3709170429202 1234.2464779542806 1587.1479262109876 1638.0483173255584 1516.8673893093294 0.6936368565568382 0.7320333027376086 0.6533905845387239 0.8645175949636119 0.9172836359125047 0.915242093992058 1.134160394750296 0.813681200250647 1.0463326836590896 1.0798889401079457 1.0 10.566879249516381 -6.668926406604143 1.157339914299836 1.0102006658660612 0.6842063568603648 0.7089067407351239 0.08282587219100568 0.17931171538833757 0.46339577644706753 0.011746997301799756 0.03800118463278172 2.1432537555357004e-07 6.668926406604143 -0.32599430900569637 RVS(ph)GDAAQDLDR ddPTM_A549_PD325901_60min_R1 2 RVSGDAAQDLDR 12 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR 181.51 1.7488e-19 577200000.0 1182.9 1380.5 1480.22 1349.87 1447.87 1139.13 1550.4 1376.78 1272.3 1444.58 1298.94 True False 1302.9871371950453 1496.8395798651704 1580.6766304859539 1433.248404122798 1346.1766060803386 1129.8533029573484 1609.4013204114333 1349.3190428369835 1218.8296555424322 1353.3689722664346 1139.178614659083 1.143795292878619 1.313963903995093 1.3875582021516406 1.2581419504190043 1.1817081085947203 0.9918140038956706 1.412773466514794 1.1844666196097688 1.069919712201748 1.1880217508045932 1.0 10.153778253200807 -8.817056504681887 0.57502200476949 1.0015808361499712 1.2623953315447216 0.13316341722178582 0.12571121537752852 0.485461460174179 0.36083669690344694 0.03929686936462063 0.03705743694131869 1.5238544770111129e-09 8.817056504681887 0.26081449539475043 RVS(ph)GPDPK ddPTM_A549_MK2206_60min_R1 4 RVSGPDPK 8 1 P22314;Q5JRR9;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 RVS(1)GPDPK;RVS(1)GPDPK;RVS(1)GPDPK;RVS(1)GPDPK 56.043 0.015757 153945000.0 10072.599999999999 12367.099999999999 11623.4 9792.099999999999 13004.6 10481.800000000001 10981.099999999999 10313.2 14531.1 13686.300000000001 14166.2 True False 11772.608628573566 12996.532565844993 13271.772899755917 12191.16493958407 11091.640567089446 11590.977118744282 12976.223728339271 11775.127682850381 11239.829051398452 10594.555324451836 10648.341572769854 1.105581422996301 1.2205217570292803 1.2463699449400414 1.144888606011621 1.0416308014999447 1.0885241649633923 1.2186145269346282 1.105817990752848 1.05554738027386 0.9949488614775881 1.0 13.378341134784677 -8.6390353749457 0.3076577027515026 0.9822389154828033 1.1950712071951786 0.5054473410901739 0.0589470032751329 0.8214580721456927 0.24197048223710182 0.05587494940647552 0.05654128494752607 2.2959616256445918e-09 8.6390353749457 0.21283229171237528 RVS(ph)GPDPK ddPTM_A549_PD325901_60min_R1 4 RVSGPDPK 8 1 P22314;Q5JRR9;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 RVS(1)GPDPK;RVS(1)GPDPK;RVS(1)GPDPK;RVS(1)GPDPK 68.548 0.0031311 203284000.0 29945.6 30642.199999999997 29715.300000000003 29631.200000000004 34360.3 30148.8 30626.0 30898.0 30078.299999999996 32560.100000000002 34856.7 True False 32985.65526721443 33224.52573281024 31731.958950614946 31461.451926662197 31946.95106459992 29903.278168602792 31791.489189190255 30281.7151509879 28814.21365110579 30504.24972925857 30569.54687482657 1.0790364476870111 1.086850448547865 1.0380251653892063 1.0291762601352163 1.0450580505956932 0.9782048223039761 1.0399725360459933 0.9905843640726093 0.9425790237942238 0.997863980587106 1.0 14.899807547204965 -6.710774752664092 0.5665450876840897 0.9744064127351574 1.0909362839877383 0.6361603752521565 0.02499055809576449 0.5679294809553639 0.28225359834997293 0.005976898633170504 0.03249798021187776 1.946369306576749e-07 6.710774752664092 0.11652987125258096 RVS(ph)GPDPKPGS(ph)NCSPAQSVLSEVPSVPTNGMAK ddPTM_A549_PD325901_60min_R1 2 RVSGPDPKPGSNCSPAQSVLSEVPSVPTNGMAK 33 2 P22314;Q5JRR9;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 2 RVS(0.956)GPDPKPGS(0.452)NCS(0.388)PAQS(0.103)VLS(0.091)EVPS(0.007)VPT(0.003)NGMAK;RVS(0.98)GPDPKPGS(0.363)NCS(0.319)PAQS(0.287)VLS(0.051)EVPS(0.001)VPTNGMAK 46.846000000000004 0.0063698999999999995 9993100.0 2790.1 2665.4 2685.1 2901.3 2805.2 2701.7 2805.5 2905.3 2660.3999999999996 2792.5 2523.0 True False 3073.3488980369407 2890.0226122221143 2867.32703281798 3080.5067116696255 2608.172429414635 2679.698250945781 2912.2648377285063 2847.35151233624 2548.5926397902113 2616.18107342897 2212.686994614736 1.3889668559163109 1.3061145201539512 1.2958574980539566 1.3922017525149286 1.178735372767335 1.2110606956463625 1.3161666538540748 1.2868297772193529 1.1518089300443337 1.1823547929717413 1.0 11.111583667452575 -9.509530379542303 0.2738871208818738 0.9240223378442863 1.3637887687564136 0.4625848235179032 0.08081704760443562 0.6938713300877309 0.13258136969366782 0.11041575568769615 0.052428235794156494 3.0936389032588617e-10 9.509530379542303 0.4397664309121273 RVS(ph)GPDPKPGSNCSPAQSVLSEVPSVPTNGMAK ddPTM_A549_MK2206_60min_R1 6 RVSGPDPKPGSNCSPAQSVLSEVPSVPTNGMAK 33 2 P22314;Q5JRR9;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 RVS(0.918)GPDPKPGS(0.027)NCS(0.027)PAQS(0.027)VLSEVPSVPTNGMAK;RVS(0.532)GPDPKPGS(0.204)NCS(0.204)PAQS(0.061)VLSEVPSVPTNGMAK;RVS(0.873)GPDPKPGS(0.042)NCS(0.042)PAQS(0.042)VLSEVPSVPTNGMAK;RVS(0.919)GPDPKPGS(0.035)NCS(0.035)PAQS(0.011)VLSEVPSVPTNGMAK;RVS(0.92)GPDPKPGS(0.033)NCS(0.033)PAQS(0.007)VLS(0.007)EVPSVPTNGMAK;RVS(0.892)GPDPKPGS(0.035)NCS(0.035)PAQS(0.035)VLS(0.002)EVPS(0.001)VPTNGMAK 109.59 7.120900000000001e-15 181656000.0 4960.53 6183.459999999999 5786.700000000001 5721.700000000001 8033.339999999999 6340.450000000001 5447.590000000001 5446.240000000001 8352.43 8343.560000000001 8353.91 True False 5797.746190685426 6498.17170230692 6607.341073955776 7123.51675685687 6851.64632770115 7011.392210549921 6437.346588252885 6218.261198410487 6460.617941089939 6458.744001145915 6279.403590813192 0.9232956771830315 1.0348389951895731 1.052224304171555 1.1344256908854564 1.0911301095099466 1.11656976799638 1.0251525475557528 0.9902630255376232 1.028858528944033 1.0285601025223317 1.0 12.616411825078925 -7.981454504922448 24.815491107206338 1.0120394760844202 1.0629914693992824 0.1499305466855293 0.052538857984325275 307.25841728630553 411137.3001901091 0.008339232350087258 0.01152135036397227 1.0436274535399386e-08 7.981454504922448 0.05095199331486211 RVS(ph)GPDPKPGSNCSPAQSVLSEVPSVPTNGMAK ddPTM_A549_PD325901_60min_R1 8 RVSGPDPKPGSNCSPAQSVLSEVPSVPTNGMAK 33 2 P22314;Q5JRR9;Q5JRS1;Q5JRS3;Q5JRS2;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 RVS(0.712)GPDPKPGS(0.055)NCS(0.219)PAQS(0.014)VLSEVPSVPTNGMAK;RVS(0.681)GPDPKPGS(0.157)NCS(0.157)PAQS(0.006)VLSEVPSVPTNGMAK;RVS(0.624)GPDPKPGS(0.103)NCS(0.103)PAQS(0.171)VLSEVPSVPTNGMAK;RVS(0.848)GPDPKPGS(0.023)NCS(0.023)PAQS(0.105)VLS(0.001)EVPSVPTNGMAK;RVS(0.942)GPDPKPGS(0.019)NCS(0.019)PAQS(0.021)VLSEVPSVPTNGMAK;RVS(0.978)GPDPKPGS(0.007)NCS(0.007)PAQS(0.007)VLSEVPSVPTNGMAK;RVS(0.973)GPDPKPGS(0.022)NCS(0.005)PAQSVLSEVPSVPTNGMAK;RVS(0.981)GPDPKPGS(0.015)NCS(0.003)PAQSVLSEVPSVPTNGMAK 127.79 4.6543e-30 333482000.0 13121.39 13051.8 14417.199999999999 13767.5 15338.0 15426.899999999998 14516.699999999999 16015.8 14517.2 15335.7 16578.5 True False 14453.46385334322 14151.720991296079 15395.63788966645 14617.887206738897 14260.711793227463 15301.26844117239 15069.140962343043 15696.352304847953 13907.09256892288 14367.401284793074 14539.449599770283 0.9940860384131446 0.9733326488177152 1.0588872559460363 1.0053948126736416 0.9808288611869308 1.0523966767912687 1.036431321484214 1.0795699106172456 0.9565074986843111 0.9881667931240032 1.0 13.82768503569062 -8.802479492529894 24.99973396087433 0.9794618783213932 1.0216686557620702 0.23428262100484054 0.032966016395105865 157.4811687949797 95929.48852107204 0.00604736533017628 0.006437948452621564 1.5758704338961773e-09 8.802479492529894 0.042206777440677024 RVS(ph)HS(ph)PPPK ddPTM_A549_MK2206_60min_R1 4 RVSHSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK 52.555 0.0058801 183214000.0 22042.7 23292.300000000003 21505.4 19176.3 25834.4 19520.8 20535.9 20923.800000000003 27497.199999999997 29345.0 31687.8 True False 25762.96886772617 24477.778580542836 24555.18909427627 23874.49436085683 22034.193982622754 21586.47809914169 24267.007209004794 23889.81272645006 21269.12810400544 22715.944119012373 23818.844721210793 1.0816212612018132 1.0276643920830157 1.030914361367399 1.0023363702269104 0.9250740008813778 0.9062772922785306 1.0188154586437566 1.002979489814469 0.8929538083375295 0.953696301600376 1.0 14.539815819812791 -6.413673196889805 2.394604988664407 0.9532218643209537 1.0478839079706603 0.487972072036723 0.04006926386959891 0.2316747686261788 2.576304378573387 0.0071239716847474365 0.019228445235409668 3.857685361992929e-07 6.413673196889805 0.09466204364970665 RVS(ph)HS(ph)PPPK ddPTM_A549_PD325901_60min_R1 3 RVSHSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK 53.967 0.0051472 319744000.0 13926.989999999998 13540.16 14341.43 12962.2 16316.9 14365.029999999999 14556.45 13958.86 14572.04 14812.89 16017.4 True False 15340.847772291836 14681.236802395657 15314.725681824428 13762.845654707899 15170.857234249128 14248.045958390509 15110.403670345077 13680.439586786171 13959.627834434117 13877.60159741638 14047.361342664317 1.0920803842141493 1.0451241656186452 1.0902208114566614 0.979745969295152 1.0799791408634556 1.0142862855756887 1.075675587873725 0.9738796670116444 0.9937544492456575 0.9879151862683032 1.0 13.778011539507173 -8.263143385948696 24.98949280182662 0.9952304770451116 1.0515651311718008 0.4753086866481967 0.03254075328736854 105.46478573643451 1546654.77684356 0.004762407365392515 0.00591071896855281 5.455777043192054e-09 8.263143385948696 0.056334654126689254 RVS(ph)HS(ph)PPPKQR ddPTM_A549_MK2206_60min_R1 1 RVSHSPPPKQR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RVS(1)HS(1)PPPKQR 60.401 0.0026365 44030000.0 1113.4 1443.9 1197.7 1345.3 1777.8 1110.8 1394.3 1095.1 1777.0 2196.1 2549.9 True False 1301.3146999835021 1517.3883426044572 1367.5518696799268 1674.8985603928122 1516.2879750374195 1228.3441187106348 1647.6262618884675 1250.3337786030959 1374.512337285894 1699.9994847423102 1916.6894563401515 0.6789387272303959 0.7916714612193124 0.713496839645175 0.8738497281614779 0.7910973632279045 0.6408675722858689 0.859620872039725 0.6523403019029294 0.7171283447817756 0.8869457068900441 1.0 10.904400893921485 -10.705583338893158 0.9024229134524261 1.0043064140598374 0.7486894905210286 0.45238459873781955 0.08026996436717476 0.3090679918280638 0.4359046844850076 0.05265511406223873 0.012882663613689251 1.9697751811495605e-11 10.705583338893158 -0.2556169235388088 RVS(ph)HS(ph)PPPKQR ddPTM_A549_PD325901_60min_R1 2 RVSHSPPPKQR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RVS(1)HS(1)PPPKQR;RVS(1)HS(1)PPPKQR 51.54600000000001 0.0077168 196324000.0 2885.7 2895.5 3202.1000000000004 2873.6 3129.7 4067.8 3644.5 3484.5 3504.7 3558.8 3773.3 True False 3178.654139659939 3139.513946758132 3419.4137617915403 3051.0957455808893 2909.88066887886 4034.673185474791 3783.193441846924 3414.998913962631 3357.4096469225483 3334.0967606513923 3309.208020919457 0.9605483002476092 0.9487206385671169 1.0333027540654465 0.9220017981018759 0.8793284225360832 1.219226219678316 1.1432322833533357 1.031968643969919 1.0145659099392907 1.0075210562692338 1.0 11.692270268762233 RVS(ph)HSPPPKQR ddPTM_A549_PD325901_60min_R1 1 RVSHSPPPKQR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.5)HS(0.5)PPPKQR 57.106 0.0028521 11320000.0 868.27 853.33 683.04 857.58 764.38 979.1 1087.9 1008.4 946.6 932.81 828.08 True False 956.4161312134095 925.243113861895 729.3952018531874 910.5507688945082 710.6925857678442 971.1265342195701 1129.300629821723 988.2866709255039 906.8176938901722 873.9122174056497 726.2314096316176 1.316957816102382 1.2740334576429662 1.0043564519237396 1.253802516413311 0.9786034814004321 1.3372136227379317 1.5550148545551936 1.3608426430176221 1.2486621782857856 1.2033522728642976 1.0 9.504285518067384 -10.426889404755428 0.9524802163319025 1.0115219468368999 1.2542043400915315 0.0802217572828684 0.16161931483219216 0.5666841856683876 0.9807748196742722 0.08343873838277778 0.029648252837073497 3.742058695209155e-11 10.426889404755428 0.2426823932546316 RVS(ph)ISEGDDKIEYR ddPTM_A549_MK2206_60min_R1 4 RVSISEGDDKIEYR 14 2 M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087;M0R2U2;M0R1H0;M0R2B0 M0R0P1 FBL rRNA 2-O-methyltransferase fibrillarin 1 RVS(1)ISEGDDKIEYR;RVS(1)ISEGDDKIEYR;RVS(0.994)IS(0.006)EGDDKIEYR;RVS(1)ISEGDDKIEYR 166.6 9.044600000000001e-21 293141000.0 11701.199999999999 13055.8 12476.199999999999 10757.6 17243.2 14007.3 12556.099999999999 13670.7 20607.9 19358.9 20250.8 True False 13676.076493126417 13720.284454169454 14245.512763213415 13393.212482927016 14706.748121928911 15489.54318870678 14837.38084120905 15608.56358976288 15940.243554054017 14985.711044660035 15221.967466352844 0.8984434189178555 0.9013476401455488 0.9358522671068759 0.8798608006837375 0.9661529072662394 1.0175782613479758 0.9747347623758954 1.0253972506684554 1.0471868100683355 0.9844792453922242 1.0 13.893867221341292 -7.026006104284389 2.8672648221551085 1.0188984489093076 0.9059326937010885 0.8006265455734523 0.02386529296099504 0.08187926469951128 1.3549477943819488 0.003711925406916708 0.007114433427578732 9.418763577602207e-08 7.026006104284389 -0.11296575520821905 RVS(ph)ISEGDDKIEYR ddPTM_A549_PD325901_60min_R1 4 RVSISEGDDKIEYR 14 2 M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087;M0R2U2;M0R1H0;M0R2B0 M0R0P1 FBL rRNA 2-O-methyltransferase fibrillarin 1 RVS(0.972)IS(0.028)EGDDKIEYR;RVS(1)ISEGDDKIEYR;RVS(1)ISEGDDKIEYR;RVS(1)ISEGDDKIEYR 226.74 9.5317e-48 452076000.0 20425.800000000003 19688.199999999997 21263.6 20231.6 23048.4 20409.800000000003 20393.8 24535.0 22124.3 22599.1 24387.7 True False 22499.412179320774 21347.393709743897 22706.67576441414 21481.25998270263 21429.55989666342 20243.589355647626 21169.897218915565 24045.630177664832 21194.492610325717 21172.18896921346 21388.167506367747 1.051956048718161 0.9980936283292288 1.0616466210886857 1.004352522314367 1.0019352939088098 0.9464854504071303 0.9897948112016984 1.1242491985583103 0.9909447643897323 0.989901961582731 1.0 14.384525260241883 -6.434798698462138 11.7611062531245 1.0016889517495973 1.0333129376474104 0.08546323937032374 0.043545140559941097 1.5425096463013181 201.70626172351564 0.006039932152696718 0.014038285725981751 3.674525804175453e-07 6.434798698462138 0.03162398589781312 RVS(ph)LSEIGFGK ddPTM_A549_MK2206_60min_R1 4 RVSLSEIGFGK 11 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;H0YBX5 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 RVS(1)LSEIGFGK;RVS(0.997)LS(0.003)EIGFGK;RVS(0.999)LS(0.001)EIGFGK;RVS(0.996)LS(0.004)EIGFGK 112.02 2.2778e-05 189053600.0 11205.8 11941.5 13477.0 11329.3 17131.5 12685.1 11660.6 12533.7 19423.5 17070.8 17401.8 True False 13097.065084493555 12549.271343729573 15388.241252130227 14104.979008591601 14611.479043960819 14027.428862312096 13779.1800827488 14310.39035784643 15024.108262955855 13214.4944238145 13080.452794752746 1.0012700087681576 0.959391203090748 1.1764303188574066 1.0783249807873505 1.1170468846324837 1.0723962757573064 1.0534176682535294 1.094028668761916 1.148592368987625 1.010247476227698 1.0 13.675124861779771 -5.72852764666009 24.99999818489258 1.0810802214397277 0.9803304710233992 0.3787558483914274 0.05083596106415663 179.36225169302568 136242.4632253513 0.008126336695903316 0.031469024115480686 1.868410732708363e-06 5.72852764666009 -0.1007497504163285 RVS(ph)LSEIGFGK ddPTM_A549_PD325901_60min_R1 4 RVSLSEIGFGK 11 1 E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RJM2;H0YBX5 E5RGN0 CDK16 Cyclin-dependent kinase 16 1 RVS(1)LSEIGFGK;RVS(0.999)LS(0.001)EIGFGK;RVS(1)LSEIGFGK;RVS(1)LSEIGFGK 157.86 1.6122e-13 364371000.0 18630.600000000002 19324.9 19095.2 19998.699999999997 25128.7 21262.0 21920.2 21244.9 22894.0 21756.300000000003 23630.3 True False 20521.964796877168 20953.47714374245 20391.11510076569 21233.97427865693 23363.746801308836 21088.849321393645 22754.385206193703 20821.153803198373 21931.844796029574 20382.603505046613 20723.92290481356 0.9902548321153287 1.0110767753761316 0.9839408877567979 1.024611719324863 1.1273805113356277 1.0176089449018035 1.0979767349408796 1.0046917226449548 1.058286353252909 0.9835301742177553 1.0 14.33900950128183 -6.511147068053856 24.864711679775052 1.0382295845270548 0.9979538975274416 0.19371622987675285 0.04084478297467973 730.9414393231458 1549190.2322311732 0.005608941112221107 0.012390741328400734 3.0821440463923625e-07 6.511147068053856 -0.04027568699961326 RVS(ph)LTQR ddPTM_A549_MK2206_60min_R1 4 RVSLTQR 7 1 Q96I34 Q96I34 PPP1R16A Protein phosphatase 1 regulatory subunit 16A 1 RVS(1)LTQR;RVS(0.999)LT(0.001)QR;RVS(1)LTQR;RVS(0.995)LT(0.005)QR 128.86 0.0024038 43437000.0 1484.94 1742.73 1728.47 1396.05 2299.2 1816.3 1239.02 1617.1999999999998 2228.7 2426.1 2150.98 True False 1735.561568702624 1831.4275131983284 1973.5930368086024 1738.0823126710657 1960.9907257318232 2008.4996604376377 1464.1338958653444 1846.443052467287 1723.9030085025722 1878.0423250003732 1616.8323019720528 1.07343325995266 1.1327257075236148 1.2206541361162861 1.0749923232923564 1.2128596907298301 1.2422436501224448 0.9055570538017691 1.1420127184589135 1.0662225181918528 1.1615566578610053 1.0 10.658954334741612 -8.65105904505358 0.5114196278279415 1.010733361412692 1.1516796757895087 0.0037764383792000533 0.09650945776943518 0.753818039584417 0.45773308813686675 0.030736308213317513 0.03226265157461281 2.2332685753461085e-09 8.65105904505358 0.1409463143768166 RVS(ph)LTQR ddPTM_A549_PD325901_60min_R1 2 RVSLTQR 7 1 Q96I34 Q96I34 PPP1R16A Protein phosphatase 1 regulatory subunit 16A 1 RVS(1)LTQR;RVS(0.999)LT(0.001)QR 114.51 0.0030834 82217000.0 4155.6 3512.3999999999996 4276.3 3839.7 4847.5 4037.0 4299.4 4189.5 4500.2 4351.7 4948.700000000001 True False 4577.473452808969 3808.4022747688705 4566.515433480891 4076.869548408594 4507.028322967145 4004.1240104630833 4463.016019721955 4105.937135900832 4311.072243867053 4076.9329193342337 4340.0412723939535 1.0547073554173942 0.8775037000208451 1.0521824901821764 0.9393619305744079 1.0384759130369012 0.9226004452843419 1.0283349257782908 0.9460594676870456 0.9933251721104206 0.939376532031321 1.0 12.083493046962017 -8.978160274674787 24.568920778469025 0.9970552524487716 0.9804850904979617 0.0 0.05757962630595667 460.4166528032594 517958.8261810363 0.008330499912214346 0.008550290618882754 1.0515737230477548e-09 8.978160274674787 -0.016570161950809847 RVS(ph)LVGADDLR ddPTM_A549_MK2206_60min_R1 6 RVSLVGADDLR 11 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR 150.26 5.3556e-12 172461000.0 3130.54 3612.97 3846.55 3127.99 4150.64 3410.21 2988.94 3870.1499999999996 4204.84 4383.8099999999995 5355.0599999999995 True False 3658.8986176453636 3796.854740757412 4392.048630138866 3894.3476904208064 3540.086354319559 3771.076158685808 3531.991708533973 4418.755614337293 3252.450453749702 3393.5042763117285 4025.2508098626954 0.9089864931348642 0.9432591706967263 1.0911242150122522 0.9674795123024013 0.8794697576721473 0.9368549530990449 0.8774587908608985 1.0977590771512746 0.8080118748825605 0.8430541192605794 1.0 11.974862963758124 -6.551759350382246 14.210705145830381 0.919957527771432 0.9859946931268079 0.09647821079944352 0.08474876482957341 3.669841235651169 1804.3341824438646 0.013205575310296756 0.027508515019171346 2.806988605018028e-07 6.551759350382246 0.06603716535537585 RVS(ph)LVGADDLR ddPTM_A549_PD325901_60min_R1 4 RVSLVGADDLR 11 1 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR 139.58 3.7882e-09 340416000.0 8874.099999999999 8689.67 8507.99 8293.54 9196.38 9323.24 8553.08 9881.85 8064.02 9562.39 9261.27 True False 9774.99209923286 9421.978987299522 9085.393364100051 8805.813129804057 8550.457994588678 9247.314624550365 8878.572139824964 9684.74874958864 7725.117282784944 8958.619063472315 8122.192502027597 1.2034918030805923 1.1600290174047774 1.118588775362318 1.0841670063355189 1.0527278185605882 1.1385244344112624 1.093125056763743 1.1923810901023304 0.9511123112209507 1.1029803912226799 1.0 12.987653505279342 -8.77118049681336 24.999998541418712 0.9769141369473154 1.1258755721212048 0.3755958891203687 0.05806033336425515 81.06204352384256 208040.34119674546 0.008006207029030566 0.00857523053697652 1.693633764260062e-09 8.77118049681336 0.14896143517388938 RVS(ph)LVGADDLRK ddPTM_A549_MK2206_60min_R1 2 RVSLVGADDLRK 12 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RVS(1)LVGADDLRK;RVS(1)LVGADDLRK 105.0 3.4858000000000004e-05 69128000.0 2845.5 2930.3 3226.1 2697.0 3250.1 2843.7 2540.3 2527.8 3824.8 4200.4 4026.6000000000004 True False 3325.7508342042884 3079.43975367674 3683.6094905021373 3357.7651210729314 2772.0145953814354 3144.618446504713 3001.8396278241958 2886.1233910628293 2958.4889069505275 3251.526722695504 3026.6840914934896 1.0988100289525846 1.0174301845149682 1.2170445871291753 1.1093873756134467 0.9158585804089022 1.0389648709433135 0.9917915240182749 0.9535595073084413 0.9774686810775446 1.074286785275654 1.0 11.563522387174814 -6.738055742742973 24.487192214691532 0.9861399215614242 1.1116066229395534 0.4847065902260498 0.058009070986336786 97.59152303086859 102196.46089803783 0.006905625750893398 0.014367666034136516 1.8278655901338137e-07 6.738055742742973 0.1254667013781292 RVS(ph)LVGADDLRK ddPTM_A549_PD325901_60min_R1 5 RVSLVGADDLRK 12 2 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 RVS(1)LVGADDLRK;RVS(1)LVGADDLRK;RVS(1)LVGADDLRK;RVS(1)LVGADDLRK;RVS(1)LVGADDLRK 112.16 1.1221e-05 157013000.0 14965.75 16957.88 18257.24 17472.13 18376.01 18313.600000000002 18271.01 19243.18 17422.58 19292.130000000005 21117.79 True False 16485.061922797144 18386.98006128503 19496.286096102864 18551.343788013728 17085.342451392986 18164.46011345474 18966.323283830305 18859.35967891733 16690.369551253993 18074.021619384504 18520.435706700402 0.8901011932906691 0.9927941411568904 1.052690466080634 1.001668863616537 0.9225129863014928 0.9807793078476618 1.0240754366793103 1.0182999999343596 0.9011866575695991 0.9758961347138074 1.0 14.176830418995431 -8.736004507118011 24.999830738366267 0.9533381130335207 0.9874429354534127 0.05060515636594276 0.04854618174750311 470.748617885773 462696.71537907247 0.009291615629062918 0.010533908479774014 1.8365192838105482e-09 8.736004507118011 0.03410482241989199 RVS(ph)NTPLR ddPTM_A549_MK2206_60min_R1 4 RVSNTPLR 8 1 O75781-2;O75781;A0A087WWY4;A0A087WTK8 O75781-2 PALM Paralemmin-1 1 RVS(0.999)NT(0.001)PLR;RVS(0.998)NT(0.002)PLR;RVS(0.999)NT(0.001)PLR;RVS(0.999)NT(0.001)PLR 80.706 0.0016139 14891000.0 2090.77 2558.81 2246.08 2237.7799999999997 2700.5299999999997 2277.6 1986.2200000000003 2053.4399999999996 3451.91 3404.52 3607.0099999999998 True False 2443.640861581199 2689.0424994388204 2564.607918051842 2786.036200457762 2303.285614370459 2518.614120251479 2347.090463951884 2344.5214083962564 2670.057896567557 2635.43656745817 2711.2898685883706 0.9012835144969126 0.9917945442103786 0.9458995689705068 1.027568550576375 0.8495165496891933 0.9289357620632397 0.8656730108956935 0.8647254709128273 0.9847924884393563 0.9720231680098101 1.0 11.404763647051784 -8.93020180173543 12.112492184570893 0.9932985760620994 0.9244963011027635 0.22860282601725823 0.05162974365436423 0.6690070942898529 114.15115255498597 0.008995415456474419 0.009569034847418867 1.1743517472015141e-09 8.93020180173543 -0.06880227495933589 RVS(ph)NTPLR ddPTM_A549_PD325901_60min_R1 2 RVSNTPLR 8 1 O75781-2;O75781;A0A087WWY4;A0A087WTK8 O75781-2 PALM Paralemmin-1 1 RVS(1)NTPLR;RVS(1)NTPLR 124.67 0.00046553 25694600.0 2500.0 2393.5 2668.5 2556.7 3392.4 2628.6000000000004 2867.2 2925.8999999999996 2923.5 2577.6 2951.3999999999996 True False 2753.7981595972706 2595.208644988981 2849.6004569940724 2714.6215523130086 3154.1295271446625 2607.1935531095514 2976.3128649920423 2867.540629175853 2800.635461745108 2414.8498961040327 2588.3965104660865 1.063901202332173 1.0026317971359295 1.1009134209043387 1.0487657286418584 1.2185650515255508 1.0072620414095985 1.1498674383763965 1.1078444193465173 1.0819963055972457 0.93295207528664 1.0 11.337842922033397 -10.396120841630024 0.8372240351463323 1.0018715760735672 1.0872021447069142 0.32369817727457906 0.06240844623300451 0.6579594542577497 0.8608360842183419 0.0325474667251996 0.010650381893814696 4.016790288570834e-11 10.396120841630024 0.08533056863334698 RVS(ph)PLNLSSVT(ph)P ddPTM_A549_PD325901_60min_R1 2 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 2 RVS(1)PLNLSS(0.005)VT(0.995)P;RVS(0.997)PLNLS(0.003)S(0.001)VT(0.999)P 128.85 1.3445e-07 16940700.0 2915.7 3139.3 3185.4 3120.7 3670.3 3615.8 3129.4 3145.3 3615.6000000000004 3286.3999999999996 4196.4 True False 3211.6997175751067 3403.8598283743067 3401.5803993662785 3313.458551376072 3412.5107898476144 3586.3541236146684 3248.4910294733863 3082.5645240598824 3463.6489055876878 3078.896143139468 3680.2694031713363 0.8726806018079935 0.9248942007998534 0.9242748360853942 0.9003304346472086 0.9272448334643679 0.9744814117478084 0.8826775090633634 0.8375920853521202 0.9411400433356907 0.8365953156816028 1.0 11.845595663007785 -9.692558465548776 1.1005730734799828 0.9891467389064955 0.9097740228478529 0.0 0.05771783691541954 0.28168444566933204 0.7015872264431443 0.010629891401969276 0.007134664118867228 2.029745253301585e-10 9.692558465548776 -0.0793727160586426 RVS(ph)PLNLSSVTP ddPTM_A549_MK2206_60min_R1 4 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVS(0.999)PLNLS(0.001)SVTP;RVS(0.994)PLNLS(0.003)S(0.003)VTP;RVS(1)PLNLSSVTP;RVS(1)PLNLSSVTP 91.85799999999999 0.00021593 199814000.0 5630.4 6530.1 5825.78 5600.04 8693.3 6895.200000000001 6072.38 6224.1 10433.3 8480.7 10037.4 True False 6580.673869936324 6862.454197687771 6651.9632055973325 6972.050051395352 7414.527085944873 7624.845487336668 7175.65284384013 7106.385235506826 8070.174208556511 6564.903979898053 7544.836561852868 0.8722089360038087 0.9095563755992725 0.8816576941149454 0.9240823169909925 0.9827286549099224 1.010604461054641 0.9510680297729242 0.94188723337456 1.0696287643074711 0.8701187793902109 1.0 12.881273933729721 -6.806379429238646 0.5476441249649795 1.0283131388209918 0.8629979358993991 0.06830491581104392 0.05886602078983574 0.5704361031401708 0.2720966240509372 0.008947603149681073 0.0447485218463146 1.5617825667947528e-07 6.806379429238646 -0.16531520292159274 RVS(ph)PLNLSSVTP ddPTM_A549_PD325901_60min_R1 3 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVS(1)PLNLSSVTP;RVS(0.998)PLNLS(0.002)SVTP;RVS(0.987)PLNLS(0.006)S(0.006)VTP 127.79 7.3523e-08 358399600.0 7007.200000000001 6355.8 5620.85 6178.7 6724.13 6513.900000000001 6685.459999999999 6143.599999999999 7164.5 7115.82 9256.9 True False 7718.5657855720065 6891.4255716820435 6002.314681916857 6560.3442661541785 6251.850305789183 6460.852958076666 6939.87883872408 6021.061078439038 6863.400980219877 6666.525910806565 8118.35998432388 0.9507543149695438 0.8488691786258578 0.7393506439117021 0.8080873820355162 0.7700878401378077 0.7958322826965334 0.8548375351825511 0.7416597798157986 0.8454171770496428 0.821166580895559 1.0 12.98697259810053 -10.19265837236686 0.718233525695622 0.9976593858547352 0.8110540647638141 0.020300961922297356 0.07657392011736261 0.35393845936035284 0.34888865326609647 0.03433405003832277 0.012041223247656406 6.417141675918222e-11 10.19265837236686 -0.1866053210909211 RVS(ph)QDLEVEKPDASPTSLQLR ddPTM_A549_MK2206_60min_R1 4 RVSQDLEVEKPDASPTSLQLR 21 2 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 RVS(1)QDLEVEKPDASPTSLQLR;RVS(1)QDLEVEKPDASPTSLQLR;RVS(1)QDLEVEKPDASPTSLQLR;RVS(1)QDLEVEKPDASPTSLQLR 157.66 3.6711e-28 31567200.0 6086.93 7013.31 6404.07 6625.59 8695.699999999999 6266.66 6064.0 6818.78 9625.4 9472.8 10435.6 True False 7114.254972849446 7370.257522730988 7312.263423278887 8248.85984743404 7416.574049124138 6929.7938017277565 7165.75030631261 7785.362946637945 7445.262268605319 7332.887900854671 7844.152512091956 0.9069501086169149 0.939586209137259 0.9321929184837815 1.0515935067195872 0.9454908019306489 0.8834343533027064 0.9135149138503398 0.9925053005581693 0.9491480764975263 0.9348221990267072 1.0 12.937401870459837 -10.622222317486791 0.5164427875543103 1.0091618852852267 0.944824791890601 0.0 0.04669163881360025 2.0213188453969693 0.7669379144814772 0.0638452566833028 0.010650826300557617 2.3865892633487685e-11 10.622222317486791 -0.06433709339462568 RVS(ph)QDLEVEKPDASPTSLQLR ddPTM_A549_PD325901_60min_R1 3 RVSQDLEVEKPDASPTSLQLR 21 2 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 RVS(1)QDLEVEKPDASPTSLQLR;RVS(1)QDLEVEKPDASPTSLQLR;RVS(1)QDLEVEKPDASPTSLQLR 180.88 1.1728e-39 42585400.0 7400.5 7604.1 7027.4 7532.099999999999 9400.4 8239.3 9162.8 9187.7 8771.4 8867.2 9116.7 True False 8151.793312039841 8244.924193591276 7504.321623189107 7997.340710359759 8740.148333619463 8172.201872531212 9511.495368076543 9004.444115888782 8402.768561365148 8307.323478714181 7995.403695522854 1.0195599399945947 1.0312079924379733 0.9385794525161081 1.000242266045677 1.0931465960266198 1.0221124765854361 1.1896204032077389 1.1262025607200992 1.0509498808759843 1.039012387000045 1.0 12.96495516324892 -6.617877042765557 10.269629107592085 1.0489860286211967 0.9948662409093529 0.22699388094671202 0.05721970454125468 0.5550486032620162 55.36977934046966 0.009330551332395454 0.019433183181710192 2.4105878164888985e-07 6.617877042765557 -0.05411978771184378 RVS(ph)RT(ph)PEPK ddPTM_A549_MK2206_60min_R1 2 RVSRTPEPK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RVS(1)RT(1)PEPK;RVS(1)RT(1)PEPK 63.76 0.00325 303380000.0 6229.7 6150.7 6196.4 5255.1 7915.1 5942.200000000001 5930.8 6144.0 8383.4 7932.799999999999 9213.6 True False 7281.1210584580695 6463.744358236196 7075.142694568502 6542.599735910404 6750.799275069565 6570.999659886871 7008.349590481332 7014.930815210865 6484.573285538868 6140.7749704311245 6925.608837576226 1.0513329916862968 0.9333106315744986 1.0215914384567826 0.9446966886741088 0.9747589610377361 0.9487974001989032 1.011947072791085 1.0128973466058329 0.9363181544928679 0.886676552841559 1.0 12.757725190241489 -5.2404727255208 23.813782720962315 0.9736314744461899 1.0513331396266334 0.25032184044095207 0.04049667681667304 2439.8825842257925 2771121.682799899 0.0044053618979485645 0.2444282987239274 5.7481391706595164e-06 5.2404727255208 0.07770166518044352 RVS(ph)RTPEPK ddPTM_A549_MK2206_60min_R1 2 RVSRTPEPK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.879)RT(0.121)PEPK;RVS(0.841)RT(0.159)PEPK 74.611 0.00070218 49256000.0 6148.1 6326.1 5994.8 5155.5 6660.6 5298.0 4961.799999999999 4647.2 7614.3 9671.2 10089.599999999999 True False 7185.748973386536 6648.071469042222 6844.952783132025 6418.597731439192 5680.834563243464 5858.630843472222 5863.2948334204975 5305.954831453112 5889.673207538541 7486.469203059893 7584.073861206158 0.9474787699712258 0.8765831650253634 0.902543001083512 0.8463258466233331 0.749047895261399 0.7724912692952698 0.7731062408835783 0.6996180322813025 0.7765843681540645 0.9871303128196668 1.0 12.888757299356717 -10.741580712992572 1.045649085949826 0.9977054964778556 0.8124461120026513 0.4888701386725487 0.06964000544898863 0.37376826831842064 0.739677001066962 0.04935938363181766 0.013322846275709397 1.813089684498114e-11 10.741580712992572 -0.1852593844752043 RVS(ph)RTPEPK ddPTM_A549_PD325901_60min_R1 2 RVSRTPEPK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.968)RT(0.032)PEPK;RVS(0.996)RT(0.004)PEPK 96.745 0.00028976 84188000.0 9325.1 8587.7 9431.5 9462.6 10852.2 10065.099999999999 10994.8 10479.2 10309.8 9939.1 10959.2 True False 10271.77728722421 9311.41561753577 10071.578306216827 10047.083310876158 10089.978910057567 9983.13316267327 11413.213130585413 10270.184135226631 9876.514959295258 9311.543529782586 9611.287876092676 1.0687201777375173 0.9687999920070217 1.0478906090482512 1.0453420436888057 1.049805087532088 1.0386883934155724 1.1874801044067034 1.068554419306585 1.0275953739625585 0.9688133005509407 1.0 13.23051404427332 -9.035496914773193 2.7621665816129326 1.0106440507630565 1.0584520254007574 0.21835315925303767 0.05013956632471731 0.357523901866178 5.5804447552691245 0.009578431769072738 0.009543495512654238 9.215164351619308e-10 9.035496914773193 0.04780797463770092 RVS(ph)SGSSER ddPTM_A549_MK2206_60min_R1 2 RVSSGSSER 9 1 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 RVS(0.936)S(0.056)GS(0.005)S(0.003)ER;RVS(0.963)S(0.034)GS(0.002)S(0.001)ER 50.207 0.01197 12865500.0 841.8800000000001 728.01 355.64 510.35 572.5699999999999 409.59 459.85 358.19 669.84 1005.55 905.3399999999999 True False 983.9687620101587 765.0625994178758 406.07509971860145 635.3857729104825 488.34571147889255 452.9325419361626 543.3987926051869 408.9645294108692 518.1223095146786 778.3955566151944 680.5190918871295 1.4459091210527846 1.124233851097845 0.5967137506642544 0.9336781002697676 0.717607657596606 0.6655691917182621 0.7985063153750794 0.6009596707665915 0.761363370538051 1.1438261848857851 1.0 9.410491826720028 -5.511440278158496 4.215667573981136 0.8226272410922315 1.3989910964855061 0.591447914791242 0.1631765565287672 0.09901178425191377 4.064768238554128 0.021214104585062187 0.11694254643568655 3.0800638661995215e-06 5.511440278158496 0.5763638553932746 RVS(ph)SGSSER ddPTM_A549_PD325901_60min_R1 2 RVSSGSSER 9 1 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 RVS(0.935)S(0.063)GS(0.002)SER;RVS(0.907)S(0.091)GS(0.002)SER 53.967 0.0086791 16073900.0 1097.18 1164.33 1163.8700000000001 951.7 988.76 757.86 558.24 794.1400000000001 700.1800000000001 945.5799999999999 1168.4099999999999 True False 1208.5649058987733 1262.4521753164895 1242.8572171188644 1010.4843475324789 919.3129086368219 751.6882394276821 579.4841286806496 778.3002547092221 670.7538695415391 885.8759174263071 1024.7029771612376 1.1794294862369712 1.2320176709292823 1.212895097232942 0.9861241452931571 0.8971506174243968 0.7335669517718241 0.5655142432454038 0.7595374191898694 0.654583703269553 0.8645197068524901 1.0 10.00099007197772 -6.541426062268889 1.8843931534544704 0.7991192818517519 1.2168682614235349 0.7446306618690628 0.1100121528240855 0.18760024192224387 1.3192229566418288 0.02251250325835248 0.06104372255465426 2.874576942696598e-07 6.541426062268889 0.41774897957178303 RVS(ph)SSAGNAAVIK ddPTM_A549_MK2206_60min_R1 4 RVSSSAGNAAVIK 13 1 Q9ULD2-2 Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RVS(0.907)S(0.063)S(0.03)AGNAAVIK;RVS(0.977)S(0.023)SAGNAAVIK;RVS(0.625)S(0.264)S(0.112)AGNAAVIK;RVS(0.951)S(0.047)S(0.002)AGNAAVIK 150.26 6.3905e-13 104858500.0 9627.8 10632.1 12206.9 10907.2 16248.4 12469.000000000002 13366.3 12986.8 19116.8 18875.199999999997 18567.7 True False 11252.737262889481 11173.228476629167 13938.021973779665 13579.46448964281 13858.281884125325 13788.46130374767 15794.783693810396 14827.718670406985 14786.8753232566 14611.279210604263 13956.82764754972 0.806253222225971 0.8005564558641486 0.9986525825033487 0.97296211091543 0.9929392433643977 0.9879366323025699 1.131688668275799 1.0623989236558466 1.0594725174422144 1.0468911402778152 1.0 13.768683437339917 -5.7196076891504335 1.0522299423184311 1.034833650388971 0.7392743762882092 0.778361154546123 0.04565027534176561 0.3401809635126829 0.46872496321638 0.007188711575314325 0.0933174797204883 1.9071827537708683e-06 5.7196076891504335 -0.29555927410076177 RVS(ph)SSAGNAAVIK ddPTM_A549_PD325901_60min_R1 3 RVSSSAGNAAVIK 13 1 Q9ULD2-2 Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 RVS(0.881)S(0.118)S(0.001)AGNAAVIK;RVS(0.764)S(0.233)S(0.003)AGNAAVIK;RVS(0.618)S(0.267)S(0.115)AGNAAVIK 173.81 6.3077e-22 110630000.0 16789.9 17765.7 19407.2 18614.2 21036.0 18906.3 19004.6 19213.0 22336.4 22315.699999999997 22691.5 True False 18494.398287928896 19262.877887729574 20724.28929697409 19763.95685808455 19558.50393026032 18752.33336116379 19727.830452716156 18829.781642693084 21397.678784923344 20906.682893578818 19900.589353270036 0.9293392250662126 0.9679551467436479 1.0413907311528292 0.9931342488023837 0.9828102868243195 0.9423004026804077 0.9913189053104353 0.9461921608667837 1.075228396761391 1.0505559670846363 1.0 14.28052353617012 -8.755984081215905 24.99999827078474 1.035524520842534 0.9767411023490813 0.44551059509436175 0.03331056407044849 115.47612837445497 529192.623987512 0.006597560747585286 0.007376025701876194 1.7539447903784464e-09 8.755984081215905 -0.05878341849345281 RVS(ph)SSGKPTSLK ddPTM_A549_MK2206_60min_R1 3 RVSSSGKPTSLK 12 2 Q9ULD2 Q9ULD2 MTUS1 Microtubule-associated tumor suppressor 1 1 RVS(0.974)S(0.013)S(0.013)GKPTSLK;RVS(0.94)S(0.056)S(0.004)GKPTSLK;RVS(0.971)S(0.028)S(0.001)GKPTSLK 91.355 5.546e-05 93280000.0 10280.900000000001 10717.3 9623.3 8704.7 13476.199999999999 10300.1 10555.400000000001 9858.1 14255.3 13935.0 14530.5 True False 12016.064576127525 11262.76479271055 10988.028644477612 10837.351890768836 11493.868831814196 11390.049745346974 12473.179548689324 11255.515864165074 11026.497311036357 10787.07382172218 10922.175828601336 1.1001530065705112 1.0311832522616355 1.0060292763007743 0.9922337875562874 1.0523424098077416 1.0428370614141225 1.142005012959639 1.0305195632074369 1.009551346185239 0.9876304859947987 1.0 13.414972666617038 -8.661993231517455 4.369580277823293 1.00448155394715 1.0494190023695353 0.25174973860310657 0.039440721007282936 0.2595653138308199 8.889542787610193 0.006887305032046791 0.00777693897517274 2.177743712239704e-09 8.661993231517455 0.04493744842238523 RVS(ph)VCAETYNPDEEEEDTDPR ddPTM_A549_MK2206_60min_R1 3 RVSVCAETYNPDEEEEDTDPR 21 1 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 RVS(0.999)VCAET(0.001)YNPDEEEEDTDPR;RVS(0.999)VCAET(0.001)YNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR 250.84 2.1841999999999995e-98 1080055000.0 4851.0 6333.5 4940.7 4856.2 7486.3 5535.700000000001 4047.7999999999997 4550.7 7352.200000000001 7387.0 7262.6 True False 5669.730204436829 6655.8480974342665 5641.365552749115 6045.9692180031025 6385.075187041643 6121.484099699736 4783.232864428124 5195.7756609342605 5686.938439050844 5718.271569505687 5459.095982436951 1.0385840847417835 1.2192216657936619 1.033388233307962 1.107503740079721 1.1696213452893593 1.1213365948123692 0.8761950476446615 0.9517648485482125 1.0417362979780735 1.047475916873885 1.0 12.414446347595193 -7.637811990645091 19.47018961424097 1.003991884747692 1.1181785033524636 0.47915416874719485 0.06667450467026305 1.4407065803785266 237.89202341433466 0.009924723990838347 0.014720739248230443 2.302438344605936e-08 7.637811990645091 0.11418661860477153 RVS(ph)VCAETYNPDEEEEDTDPR ddPTM_A549_PD325901_60min_R1 4 RVSVCAETYNPDEEEEDTDPR 21 1 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 RVS(1)VCAETYNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR 247.98 2.868399999999999e-88 1489407000.0 10803.3 12594.8 13204.1 12784.9 13452.0 13465.8 12387.5 14285.6 12413.3 13227.199999999999 15369.6 True False 11900.043063030877 13656.20799745445 14100.20962870356 13574.594236385412 12507.177926880677 13356.138989371768 12858.913091200098 14000.662501163608 11891.612169413555 12392.032334631926 13479.236635921785 0.8828425069204289 1.0131291827803544 1.0460688546061205 1.0070744065883896 0.9278847359611895 0.9908676099489221 0.953979326761833 1.038683634639386 0.8822170342883323 0.9193422943260384 1.0 13.718451174826326 -8.754785348321894 24.995938261198322 0.9443802663868985 0.9840198199821361 0.13807299772572923 0.05234425983090766 304.838056085896 1145125.5092989865 0.010078285649605792 0.011303571203714781 1.7587926890585997e-09 8.754785348321894 0.03963955359523752 RVS(ph)VELTNSLFK ddPTM_A549_MK2206_60min_R1 4 RVSVELTNSLFK 12 1 P14923 P14923 JUP Junction plakoglobin 1 RVS(1)VELTNSLFK;RVS(1)VELTNSLFK;RVS(1)VELTNSLFK;RVS(1)VELTNSLFK 126.63 4.9695e-07 78940000.0 6418.3 7425.200000000001 7487.0 6662.400000000001 9805.599999999999 7727.3 7792.7 6462.5 11096.8 10217.400000000001 9771.3 True False 7501.55212763078 7803.11096440655 8548.769181175265 8294.688299086502 8363.209229399776 8544.997757033396 9208.532719657362 7378.579165576208 8583.392517948287 7909.282243707513 7344.816535839251 1.0213396197204836 1.062396987907191 1.1639186818978107 1.1293254581121697 1.1386546128948556 1.1634052008430469 1.2537457776819956 1.0045967968801142 1.168632664419236 1.0768522542549477 1.0 12.84251073920939 -10.908934521148407 1.026698399980214 0.995944140310282 1.128139133532426 0.14040920705804816 0.07150139959717114 0.5459155870609448 0.9680688083232599 0.05500595825744056 0.011507845970936357 1.2332907632345332e-11 10.908934521148407 0.132194993222144 RVS(ph)VELTNSLFK ddPTM_A549_PD325901_60min_R1 4 RVSVELTNSLFK 12 1 P14923 P14923 JUP Junction plakoglobin 1 RVS(1)VELTNSLFK;RVS(1)VELTNSLFK;RVS(1)VELTNSLFK;RVS(1)VELTNSLFK 145.49 6.0636e-12 139366600.0 11465.599999999999 12475.0 11476.7 12261.8 14758.2 14086.7 12882.1 14888.0 13569.7 13881.1 14049.0 True False 12629.579271471393 13526.312031016309 12255.577877003507 13019.183537431707 13721.634945026048 13971.982585630496 13372.335364855602 14591.047160589937 12999.412698902874 13004.644977036647 12321.062063948642 1.0250398225348991 1.097820298348648 0.9946851832573149 1.0566608194861515 1.113673064368004 1.1339917381402078 1.085323269654081 1.1842361547129332 1.0550561819617061 1.0554808432536156 1.0 13.588838999896495 -9.625865255147309 1.3843520315378202 1.012694082261833 1.0848219479962207 0.1361177916753672 0.051042134578658235 0.36135089968869216 1.4072917564835266 0.012971376046972044 0.009641086312154363 2.3666538651404295e-10 9.625865255147309 0.07212786573438756 RVSHS(ph)PPPK ddPTM_A549_MK2206_60min_R1 4 RVSHSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.032)HS(0.968)PPPK;RVS(0.008)HS(0.992)PPPK;RVS(0.197)HS(0.803)PPPK;RVS(0.002)HS(0.998)PPPK 92.611 0.00022034 82247000.0 5900.6 6196.799999999999 5938.200000000001 5198.1 7465.099999999999 6410.7 5647.5 6241.5 7931.400000000001 8850.0 8374.300000000001 True False 6896.477024180574 6512.190651327175 6780.326052044205 6471.634733351576 6366.993678958173 7089.076018921744 6673.577647575927 7126.2517387920925 6134.950563843186 6850.77885340806 6294.73019107782 1.0955953336897064 1.0345464306885759 1.0771432366798932 1.0281035941023338 1.0114799976626132 1.126192196286639 1.0601848601922743 1.132098044312189 0.9746169220308908 1.088335583170568 1.0 12.619928826174911 -8.787674136021003 24.99999781583993 0.9880135326492656 1.0677893943456054 0.07691137438841644 0.047389546415878565 127.9358679373564 121913.82719085415 0.006203413612186766 0.0066050694047976866 1.6305190003400574e-09 8.787674136021003 0.07977586169633977 RVSHS(ph)PPPK ddPTM_A549_PD325901_60min_R1 4 RVSHSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.397)HS(0.603)PPPK;RVS(0.093)HS(0.907)PPPK;RVS(0.383)HS(0.617)PPPK;RVS(0.012)HS(0.988)PPPK 87.363 0.00040554 127678000.0 9935.2 11066.1 10166.0 10375.100000000002 12053.699999999999 11357.0 10109.6 10696.9 11513.2 12211.599999999999 12676.0 True False 10943.814190092326 11998.679083481327 10855.925893124126 11015.946363438296 11207.089695007553 11264.512357401354 10494.326360185389 10483.541937944288 11029.340242231485 11440.55749195531 11116.932359784538 0.9844275233410192 1.079315650681343 0.9765217185628833 0.9909160195386671 1.0081099112871423 1.0132752447204487 0.9439948018527643 0.9430247120931007 0.9921208374110544 1.0291110102766734 1.0 13.440471120858508 -5.800821370821865 24.99999621354474 0.9897503781190354 1.031872014322822 0.2098908560306051 0.03234126587795003 143.03694057272781 90800.84555398353 0.0040186773107624 0.012494839943157851 1.581898554406919e-06 5.800821370821865 0.042121636203786506 RVSHS(ph)PPPKQR ddPTM_A549_PD325901_60min_R1 1 RVSHSPPPKQR 11 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.001)HS(0.999)PPPKQR 64.65 0.0012517000000000001 8681400.0 596.26 872.02 630.57 1030.3 962.13 1147.0 732.4 1382.0 810.33 909.58 758.81 True False 656.7918762565879 945.5081857544565 673.3642721254458 1093.939291018928 894.5533079683091 1137.6592122866373 760.2718827846583 1354.4349258419736 776.274648098482 852.1489635701062 665.4811804929084 0.9869428249948639 1.4207887667899757 1.0118457018223996 1.6438320467735383 1.3442202938116623 1.709528752479516 1.14243934324565 2.035271568218911 1.1664862521333978 1.2805004687569628 1.0 9.378254057724881 -8.982409135449174 24.495845891632783 1.0734492632104773 1.4174693389922746 0.12465892055117667 0.3011168485293953 92.175402809569 128359.66363307912 0.048993310070510686 0.04964833815372281 1.0413359566409523e-09 8.982409135449174 0.3440200757817973 RVSPLNLSSVT(ph)P ddPTM_A549_MK2206_60min_R1 2 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVSPLNLS(0.001)S(0.006)VT(0.993)P;RVSPLNLS(0.001)S(0.007)VT(0.993)P 62.088 0.039026 2659300.0 848.46 1110.4 1092.9 1083.3 1359.8 1196.6 1083.1 825.08 1415.5 1744.8 1515.8 True False 991.6593051446038 1166.9146170981303 1247.8896538141373 1348.7085486311855 1159.7752213161675 1323.2234177612047 1279.8852501265148 942.0376167015268 1094.8915100890172 1350.6484681837726 1139.3850260482373 0.8703460923863507 1.0241617981810545 1.0952308704128138 1.183716230946927 1.0178957900988486 1.1613487868544135 1.1233123315351778 0.826794801726352 0.9609495342294094 1.1854188332352116 1.0 10.154039636014971 -8.211711045678195 24.99973796236645 0.9694366788079829 1.0734765071663943 0.07849377557594195 0.11185035282034053 422.2960642338802 212299.55391215582 0.014567830443797836 0.01880697552663325 6.141705026321912e-09 8.211711045678195 0.10403982835841141 RVSPLNLSSVT(ph)P ddPTM_A549_PD325901_60min_R1 2 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVSPLNLSS(0.001)VT(0.999)P;RVSPLNLSS(0.003)VT(0.997)P 88.021 0.00085816 8712100.0 2906.8 2835.8 3218.5 3892.3 3951.9 4513.0 3252.3 4353.1 4184.3 3612.1 4885.7 True False 3201.8961961269392 3074.7828182409667 3436.926764412748 4132.718530945327 3674.332177314878 4476.2476242803805 3376.068056226849 4266.274005559115 4008.448422295211 3384.0313895551567 4284.7898730040515 0.7472702958668311 0.7176041088066816 0.8021225932377241 0.9645090315824267 0.8575291405687571 1.0446831132799748 0.7879191643673064 0.9956786988408476 0.9355064171408017 0.7897776763514015 1.0 12.065008740666574 -3.6780725212766594 0.316433522180917 0.9784533399807891 4.291868053201776e-11 0.30597420803683884 0.09132040792033833 8.41378934709938 0.26977607486683997 0.02108706359520188 3.909743153813625 0.000209858941844865 3.6780725212766594 -0.9784533399378704 RVSRT(ph)PEPK ddPTM_A549_MK2206_60min_R1 2 RVSRTPEPK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.378)RT(0.622)PEPK;RVS(0.299)RT(0.701)PEPK 58.172 0.022344 26432000.0 4924.4 6053.3 5215.799999999999 4176.6 6381.5 5106.5 4386.6 4802.4 7126.700000000001 7598.1 7337.8 True False 5755.518329979118 6361.387114265229 5955.478869396808 5199.867187494702 5442.789803521931 5646.866440579636 5183.588438929892 5483.154906733182 5512.513829001339 5881.683932890371 5515.6217470225365 1.0434940236948052 1.1533399870466565 1.0797475139791297 0.9427526806568478 0.9867953339004942 1.0237950859534464 0.9398012910744135 0.9941136572124655 0.9994365244457027 1.0663682541438675 1.0 12.42930780706762 -6.1134658229837795 5.875759803678464 0.9929291046314653 1.102564625222614 0.5405176319134662 0.04038855087276586 0.0922493489975955 4.146024130205538 0.004280952584003968 0.011590710719446222 7.700770435611951e-07 6.1134658229837795 0.10963552059114867 RVSRT(ph)PEPK ddPTM_A549_PD325901_60min_R1 2 RVSRTPEPK 9 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.062)RT(0.938)PEPK;RVS(0.235)RT(0.765)PEPK 72.29 0.0050815 44805000.0 6512.299999999999 6317.3 7146.799999999999 6339.5 7757.9 5954.799999999999 6621.7 7365.0 6759.6 6893.4 7615.5 True False 7173.423901898123 6849.681041566279 7631.8248251996365 6731.07651695088 7213.011867302074 5906.306083107648 6873.692417033278 7218.099297269274 6475.517519142201 6458.149547564992 6678.841778631994 1.0740520796357946 1.025579175042125 1.1426868726875035 1.007820927647366 1.0799794494876465 0.8843308883291764 1.029174315676212 1.0807411728726015 0.969556958192916 0.9669565115656615 1.0 12.705382221927053 RVSS(ph)DEEHTVDSCISDMK ddPTM_A549_MK2206_60min_R1 1 RVSSDEEHTVDSCISDMK 18 1 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 RVS(0.42)S(0.574)DEEHT(0.007)VDSCISDMK 85.932 1.8492000000000002e-05 2383900.0 753.29 1404.1 898.19 950.21 1411.8 881.14 968.18 884.36 1396.2 1111.8 1146.4 True False 880.4269358277091 1475.5626926040027 1025.5668479818098 1183.0114926565477 1204.1260902001507 974.3816499466054 1144.0857736750886 1009.7207382389125 1079.9629292732495 860.6436078213655 861.7172409695863 1.0217121045844122 1.7123513635908343 1.1901431226185788 1.3728534563442734 1.3973563867020846 1.130744058051167 1.3276811920204672 1.1717541326001506 1.2532683320320916 0.9987540772109739 1.0 9.751070738935528 -12.627294813897675 0.17916778045923828 0.499806316008056 1.3864478832356404 0.31595947679706693 0.16831195928995385 17.626706606660292 0.42068458538199033 3.6663251748731924 0.21221193061259563 2.358876403846333e-13 12.627294813897675 0.8866415672275845 RVSSGS(ph)SER ddPTM_A549_MK2206_60min_R1 1 RVSSGSSER 9 1 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 RVS(0.22)S(0.07)GS(0.355)S(0.355)ER 50.353 0.022757 4734200.0 882.88 575.2 602.84 291.36 729.3 636.98 517.13 576.91 766.1 1306.5 1392.5 True False 1031.888559656398 604.4752231221581 688.3317768371439 362.74321307964755 622.0209360978681 704.3848008068964 611.0858271608572 658.688759212777 592.5795732103118 1011.3607425963424 1046.7038189551192 0.9858457960786742 0.5775035995622722 0.6576184822983419 0.3465576474553795 0.5942664245925898 0.672955221955772 0.5838192391147276 0.629298133134088 0.566138732351105 0.9662339281478324 1.0 10.031637551788139 -10.73578014252418 0.8232861370217662 1.0190927307738042 0.6117877102113061 0.4834360116916181 0.14232217860232108 0.4510317666786076 0.5016403764009951 0.11902327406860996 0.02551373152834515 1.8374683088960553e-11 10.73578014252418 -0.4073050205624982 RVT(ph)AYTVDVTGR ddPTM_A549_MK2206_60min_R1 2 RVTAYTVDVTGR 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 RVT(1)AYTVDVTGR;RVT(1)AYTVDVTGR 101.2 0.0001425 9421300.0 1403.65 1567.1999999999998 1798.3 1470.35 2124.9 1671.8000000000002 1212.1 1473.92 2857.6 2077.71 2436.8999999999996 True False 1640.5518040523102 1646.9637859475763 2053.3259808344433 1830.5858160065206 1812.33002483801 1848.7087663489756 1432.3228803234672 1682.8526736906908 2210.3581626495065 1608.3538679677365 1831.7504749814934 0.8956196962737979 0.8991201631675384 1.1209638042294972 0.9993641825178265 0.9893978735593452 1.009257970230718 0.7819421367082972 0.9187128359869502 1.2066917371329402 0.878042009506773 1.0 10.83900727443708 -8.741828137774789 24.999994293151605 1.0976044440968524 0.9547727232778468 0.0 0.11328837106921336 240.60381942468456 306716.52281908784 0.01852211303460929 0.02098771660251895 1.8120570313678185e-09 8.741828137774789 -0.14283172081900564 RVT(ph)AYTVDVTGR ddPTM_A549_PD325901_60min_R1 2 RVTAYTVDVTGR 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 RVT(0.999)AYTVDVTGR;RVT(0.996)AY(0.003)T(0.001)VDVTGR 52.93 0.014691 10766800.0 3017.8 3174.0 2849.3999999999996 3453.0 3149.3999999999996 3061.4 3705.0 4116.7 3443.8 3701.4 3909.3 True False 3324.1648344130604 3441.4841191539695 3042.7774188341423 3666.283967668015 2928.1970088401704 3036.4689734039353 3845.9958024537914 4034.589189011326 3299.069062137093 3467.6929723151225 3428.4808830944876 0.9695736822696607 1.003792710679415 0.8875001852388291 1.0693610647637302 0.8540800163940918 0.8856601733953 1.1217784008707852 1.1767862579912582 0.9622538887133623 1.0114371614011284 1.0 11.74335376254862 -7.719880986801581 24.99999039704348 1.0089333137745657 0.9465745010272651 0.2227599112112688 0.08410423413059608 274.38877521701187 165061.51554661166 0.013659550324684399 0.020260270990453525 1.9059829581925814e-08 7.719880986801581 -0.062358812747300596 RVT(ph)FPSDEDIVSGAVEPK ddPTM_A549_PD325901_60min_R1 1 RVTFPSDEDIVSGAVEPK 18 1 O75864;F5H3P7 O75864 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 RVT(0.5)FPS(0.5)DEDIVS(0.001)GAVEPK 51.175 0.010191 1870300.0 1379.4 1052.9 1751.1 1044.0 1545.3 1466.0 1248.6 1349.1 1338.8 1307.6 1390.0 True False 1519.4356725393911 1141.6315781528713 1869.9401762197194 1108.4855089039704 1436.7634589955908 1454.0613820507501 1296.1161562601371 1322.1911421515244 1282.5348918024106 1225.0379128435875 1219.038811935983 1.246421080003467 0.9365014197864796 1.5339463829293716 0.909311088416914 1.178603539877319 1.1927933448989394 1.063227965811643 1.0846177572080113 1.0520870043223547 1.004921173016696 1.0 10.251528344087145 -8.246841051647607 0.44673582813292895 1.0040488658753184 1.1826705170109457 0.1460100476824049 0.1550358660110499 1.2794836318064668 0.5992738837853211 0.053945280620650064 0.07790842992965567 5.6644656607715425e-09 8.246841051647607 0.17862165113562734 RVT(ph)LELGGK ddPTM_A549_MK2206_60min_R1 4 RVTLELGGK 9 1 P00352;P05091;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;O94788 P00352 ALDH1A1;ALDH2;ALDH1A3;ALDH1A2;ALDH1B1 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 1 RVT(1)LELGGK;RVT(1)LELGGK;RVT(1)LELGGK;RVT(1)LELGGK 136.53 0.00013680000000000002 220060000.0 12665.7 14149.499999999998 13516.3 12138.3 17367.7 14095.6 12271.900000000001 12432.9 19642.2 17931.6 18490.0 True False 14803.3605133654 14869.649112599045 15433.1145830799 15112.184044908992 14812.934336853068 15587.187036097976 14501.545379953439 14195.301649159363 15193.273062147999 13880.839105962941 13898.422701960615 1.065110828099733 1.0698803332914477 1.1104220179533602 1.0873308697667654 1.065799670545597 1.1215076250270566 1.043395044957709 1.021360621529871 1.093165274071332 0.9987348495311491 1.0 13.762633543852303 -12.129689158163496 0.39216992375695 0.9053287057144203 1.0806910733972017 0.5531762154903792 0.026605931175740494 3.963708414148304 0.3480311330976175 0.3425231907833581 0.007638771643220839 7.418410164549938e-13 12.129689158163496 0.17536236768278146 RVT(ph)LELGGK ddPTM_A549_PD325901_60min_R1 8 RVTLELGGK 9 1 P00352;P05091;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;O94788 P00352 ALDH1A1;ALDH2;ALDH1A3;ALDH1A2;ALDH1B1 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 1 RVT(1)LELGGK;RVT(1)LELGGK;RVT(1)LELGGK;RVT(1)LELGGK;RVT(1)LELGGK;RVT(1)LELGGK;RVT(1)LELGGK;RVT(1)LELGGK 120.57 0.00042388 310368000.0 32379.399999999998 31829.4 33373.5 30904.32 37943.399999999994 38806.2 34863.600000000006 37768.799999999996 37699.1 34165.8 37998.8 True False 35666.53285154558 34511.775243289034 35638.42640115859 32813.20965759689 35278.38648162385 38490.17517335459 36190.35337609397 37015.471654949586 36114.73792915168 32008.565557228078 33325.18849423958 1.0702574977996213 1.03560630269967 1.0694140982073925 0.9846368809967516 1.0586102607558212 1.1549874708137902 1.0859759542650345 1.110735552519017 1.0837069364332115 0.9604916582170545 1.0 15.024325415071818 -4.861414986872497 16.65109901828327 1.054194653560495 4.33322198230659 0.006978947132650903 0.054263115413744005 3357886.3285948527 645080.5546836931 0.007277938734116647 420748850.8867916 1.375894115134374e-05 4.861414986872497 3.279027328746095 RVT(ph)LTPDSK ddPTM_A549_MK2206_60min_R1 1 RVTLTPDSK 9 1 C9J5X9;Q8NB91 C9J5X9 FANCB Fanconi anemia group B protein 1 RVT(0.499)LT(0.499)PDS(0.001)K 41.54 0.05651900000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RVT(ph)SFAELAK ddPTM_A549_PD325901_60min_R1 2 RVTSFAELAK 10 1 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 RVT(0.5)S(0.5)FAELAK;RVT(0.5)S(0.5)FAELAK 53.251999999999995 0.013308 4136700.0 667.01 705.53 641.62 825.97 983.46 808.34 760.23 832.55 889.96 924.9300000000001 871.73 True False 734.72436417319 764.9874891577502 685.164191574494 876.988290986027 914.3851623528149 801.7571470442733 789.1609686638182 815.9441371271596 852.5580761192662 866.5297619504588 764.5127363517659 0.9610361335237851 1.0006209874386789 0.8962103036295759 1.1471205766577435 1.1960365326498499 1.048716533972 1.0322404469409796 1.0672734387929532 1.1151653014803262 1.1334405834564842 1.0 9.57839672604815 -6.256311884743063 24.998653410393036 1.0694893743759317 0.9574223283220471 0.48661242218908696 0.06067470354772351 366.73631998664484 1787982.7815136218 0.00939545583520764 0.024060420254114392 5.542275563884029e-07 6.256311884743063 -0.11206704605388462 RVTFGEDLS(ph)PEVFDESLPANTPLR ddPTM_A549_MK2206_60min_R1 2 RVTFGEDLSPEVFDESLPANTPLR 24 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RVT(0.06)FGEDLS(0.94)PEVFDESLPANTPLR;RVT(0.086)FGEDLS(0.914)PEVFDESLPANTPLR 98.236 2.3327e-08 5394600.0 1622.9499999999998 1815.9099999999999 1739.53 1683.19 3152.9 1701.15 1968.91 2017.5 3459.7 2578.7 2585.7 True False 1896.8642826820756 1908.3320626212765 1986.2215111165754 2095.57162556127 2689.1125866213765 1881.1645638680218 2326.635461016153 2303.486803334623 2676.083474005634 1996.169879015069 1943.5993283104142 0.9759543827024443 0.9818546625451884 1.02192951097756 1.0781911657599546 1.3835735315668394 0.9678767307989001 1.1970756663302178 1.1851654658355237 1.3768699314852995 1.027048039140019 1.0 10.924515123648218 -6.528110895205337 24.950402968706033 1.1814188067717661 1.001765884657993 0.2420125347809 0.1290311616353174 158.88409577818376 757665.5676387562 0.02187195042676247 0.045649550753544536 2.964074429383197e-07 6.528110895205337 -0.17965292211377304 RVTFGEDLS(ph)PEVFDESLPANTPLR ddPTM_A549_PD325901_60min_R1 2 RVTFGEDLSPEVFDESLPANTPLR 24 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RVT(0.001)FGEDLS(0.999)PEVFDESLPANTPLR;RVT(0.277)FGEDLS(0.723)PEVFDESLPANTPLR 165.02 1.8177999999999998e-34 9903800.0 2707.1 2208.8 2726.7 2740.5 3450.5 3551.1 3278.3 3097.6 3135.8 3564.2 3361.3 True False 2981.9227991383104 2394.9433277842736 2911.750258979103 2909.7744608729213 3208.14878357878 3522.1810189634543 3403.0575004545917 3035.815937979811 3004.0132310382446 3339.1558037298223 2947.8814090362707 1.011547747476439 0.8124286548444413 0.9877433502085893 0.9870731067923769 1.0882896353105318 1.1948177454380484 1.1544078706908119 1.029829737612236 1.0190414111741097 1.1327307107722044 1.0 11.525462771769208 -6.179002371064621 2.4866183105495683 1.0398679741716574 0.9128017835033149 0.3176906217648944 0.08192989638499426 0.30016268262872936 3.584322980727661 0.011997478191460647 0.038123235199324076 6.622128882889423e-07 6.179002371064621 -0.12706619066834257 RVTFGEDLS(ph)PEVFDESLPANTPLRK ddPTM_A549_MK2206_60min_R1 2 RVTFGEDLSPEVFDESLPANTPLRK 25 2 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RVT(0.037)FGEDLS(0.963)PEVFDESLPANTPLRK;RVT(0.197)FGEDLS(0.803)PEVFDESLPANTPLRK 61.89 7.1611e-05 2206560.0 544.25 710.3 707.75 553.94 858.9 608.45 475.67 887.95 1011.49 1101.28 703.44 True False 636.1060943650267 746.4512360634026 808.119592356991 689.6553248673121 732.5569477779503 672.8357751435781 562.0930818277899 1013.8196317328266 782.3891300176192 852.5000831278223 528.7564340436551 1.203022891845338 1.4117109277610687 1.5283399696471045 1.3042967999333563 1.3854336337351671 1.2724871638876882 1.0630472664496835 1.9173660431508315 1.4796777488536883 1.6122736826261266 1.0 9.046459503196719 -10.742397378306055 1.0739473991188258 1.0071895870006717 1.400805317152953 0.0 0.272611545574122 0.4533337013870421 0.954730562225338 0.1283151252598827 0.03549780850885468 1.8096834792239304e-11 10.742397378306055 0.39361573015228135 RVTFGEDLS(ph)PEVFDESLPANTPLRK ddPTM_A549_PD325901_60min_R1 2 RVTFGEDLSPEVFDESLPANTPLRK 25 2 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RVT(0.059)FGEDLS(0.941)PEVFDESLPANTPLRK;RVT(0.012)FGEDLS(0.988)PEVFDESLPANTPLRK 66.027 4.6293999999999994e-05 4492100.0 1638.06 1467.99 2001.53 1757.46 2108.7 2009.45 1852.67 2120.13 1835.95 2180.45 2566.7 True False 1804.3546453239624 1591.702669211354 2137.365861977645 1866.0143127187473 1960.5921866200772 1993.085705431025 1923.1743706699242 2077.84234394019 1758.7914061881065 2042.7760148820742 2251.01217165186 0.8015748062347761 0.7071053143365791 0.9495132407077044 0.828966780463657 0.8709824901485699 0.8854175603894843 0.8543598274986853 0.9230702392939115 0.7813335833264077 0.9074922119959147 1.0 11.136358142402313 -10.946361088644181 1.1310584791284728 1.002577734229919 0.8418557603534861 0.23774089283918565 0.06882685873745972 0.3791233112944978 0.8387546163188125 0.04910162176601293 0.010724414122323684 1.1314592346007584e-11 10.946361088644181 -0.16072197387643283 RVTFGEDLSPEVFDESLPANT(ph)PLR ddPTM_A549_PD325901_60min_R1 1 RVTFGEDLSPEVFDESLPANTPLR 24 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RVTFGEDLS(0.002)PEVFDES(0.399)LPANT(0.599)PLR 43.801 0.029376999999999997 620110.0 646.09 678.22 582.39 756.15 1013.6 606.37 551.29 550.29 568.57 991.11 822.49 True False 711.6805811736807 735.3759796132971 621.9144875955698 802.8556681587523 942.4082327301704 601.4319237613327 572.2696426274633 539.3140342558463 544.6749801554355 928.5311454561092 721.3289441936877 0.9866241842952912 1.019473827485616 0.8621787502104953 1.11302294829746 1.3064888638062466 0.8337831562181693 0.7933546092028165 0.7476672586023837 0.7550992990642866 1.2872506405438024 1.0 9.49451350462701 RVTFPS(ph)DEDIVSGAVEPK ddPTM_A549_PD325901_60min_R1 1 RVTFPSDEDIVSGAVEPK 18 1 O75864;F5H3P7 O75864 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 RVT(0.172)FPS(0.827)DEDIVS(0.001)GAVEPK 83.245 6.6142e-05 1797700.0 1205.8 1230.3 1410.1 1481.2 1900.9 1320.0 1085.9 1471.2 1778.5 1730.9 1473.5 True False 1328.2119283369561 1333.981698738225 1505.7978656201385 1572.690359950729 1767.3873417489947 1309.2503576446054 1127.2245187272808 1441.8557618659277 1703.7558299003485 1621.610678602759 1292.2688412860941 1.027813939253608 1.0322787767680117 1.1652357601701018 1.216999365538794 1.3676622737340416 1.013140854144259 0.8722832917687952 1.115755263766138 1.3184221235302196 1.2548555120998637 1.0 10.335690521600275 -8.541222827152977 24.98138915128737 1.1538777054410572 1.102485615770154 0.05812962225419249 0.14135700341364682 1027.2785103411613 1398965.0998178306 0.02863401840820221 0.0324708437491114 2.875922462200621e-09 8.541222827152977 -0.05139208967090325 RVTIMPK ddPTM_A549_MK2206_60min_R1 1 RVTIMPK 7 1 K7EK07;P84243;Q6NXT2;P68431;Q71DI3;Q16695;Q5TEC6;A0A590UJL8 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 79.597 0.016415 12895000.0 1643.0 1876.7 1770.7 1613.3 2314.2 1622.8 1451.6 1892.9 2784.2 2772.2 2405.4 False True 1920.298232506639 1972.2160139661928 2021.8118858163534 2008.558572423788 1973.7842456022033 1794.5236188725412 1715.336930185253 2161.224371763127 2153.583145453791 2145.958094623482 1808.0727943372685 1.062069092860006 1.0907835238398624 1.1182137644836523 1.1108836871581853 1.0916508736727466 0.9925062887361824 0.9487101047908821 1.1953193358873044 1.1910931640576816 1.1868759384823673 1.0 10.82023704754531 -11.200113954236874 1.6507405044622516 1.0002009131053007 1.1029922272664416 0.0 0.08928474221582128 0.5320635361860212 2.617232433519379 0.058132969733735856 0.01224752146710696 6.307918097253658e-12 11.200113954236874 0.10279131416114096 RVTIMPK ddPTM_A549_PD325901_60min_R1 1 RVTIMPK 7 1 K7EK07;P84243;Q6NXT2;P68431;Q71DI3;Q16695;Q5TEC6;A0A590UJL8 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 83.206 0.014764 25149000.0 2406.8 2586.6 2479.5 2687.8 3051.6 2494.0 2590.9 2723.4 2882.7 2559.6 2619.4 False True 2651.1365642074866 2804.5818596734894 2647.7737804447456 2853.8193015633037 2837.266143448486 2473.689690883066 2689.4981172948815 2669.079650534032 2761.5501438592846 2397.98641917593 2297.2304057446854 1.1540577547545026 1.220853534177534 1.152593912140226 1.2422869270869636 1.2350812249190735 1.0768139254543683 1.1707567993916728 1.1618685021143127 1.202121535982405 1.0438597770512197 1.0 11.1656798468873 -10.835997222300579 0.6941888828699186 0.9759199017902529 1.1828126447999325 0.6297395799236274 0.046122740171391875 0.4390847349221038 0.30250037874869734 0.055356551802630515 0.008755099338101592 1.458823590719676e-11 10.835997222300579 0.20689274300967964 RVTLELGGK ddPTM_A549_MK2206_60min_R1 2 RVTLELGGK 9 1 P00352;P05091;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;O94788 P00352 ALDH1A1;ALDH2;ALDH1A3;ALDH1A2;ALDH1B1 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 0 ; 89.029 0.0011131 8522400.0 3123.5 3462.4 3418.8999999999996 2890.2 3994.0 3050.3 3286.3 3039.8 5194.1 4615.1 4209.3 False True 3650.670437756842 3638.6213708938794 3903.7514296140102 3598.2991297460094 3406.487890819805 3373.0807213747303 3883.3781714437855 3470.7009589970703 4017.6446432733046 3572.545704673845 3164.0146392300094 1.1538095912998887 1.150001433551954 1.23379689247077 1.137257421356839 1.076634680694399 1.0660762057016269 1.2273578394026772 1.0969294882408305 1.269793316838456 1.1291179441392394 1.0 11.627540559534637 -11.075541986475054 1.4053907021135121 1.0003166031061637 1.1681112340408404 0.09964609400935853 0.07273069414292649 0.31629005408416844 1.118743074443493 0.049463935058307 0.01099088272235759 8.403457607028838e-12 11.075541986475054 0.16779463093467673 RVTLELGGK ddPTM_A549_PD325901_60min_R1 2 RVTLELGGK 9 1 P00352;P05091;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;O94788 P00352 ALDH1A1;ALDH2;ALDH1A3;ALDH1A2;ALDH1B1 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 0 ; 104.22 0.0006249 15928100.0 5818.0 5910.5 5367.8 5629.3 7223.9 6323.7 5995.2 6683.5 6751.1 6283.5 6824.4 False True 6408.639077014774 6408.598577901552 5732.091187203595 5977.0090759321065 6716.518185102083 6272.20188381605 6223.350616699322 6550.192349395681 6467.374744582653 5886.758737651183 5985.042063435909 1.0707759459481034 1.0707691792265344 0.9577361573149747 0.9986578227155866 1.122217373564497 1.047979582655646 1.0398173564592468 1.0944271201387896 1.0805896894348384 0.9835785070943506 1.0 12.5471456712623 RVTLT(ph)PDSK ddPTM_A549_PD325901_60min_R1 2 RVTLTPDSK 9 1 C9J5X9;Q8NB91 C9J5X9 FANCB Fanconi anemia group B protein 1 RVT(0.015)LT(0.799)PDS(0.186)K;RVT(0.087)LT(0.913)PDSK 67.252 0.0030872 10451500.0 5900.9 5916.2 6199.2 6605.700000000001 7009.5 5788.8 5880.3 6820.5 6517.6 6894.2 8131.400000000001 True False 6499.955023987017 6414.778936905707 6619.914990817933 7013.719086366818 6517.176901462238 5741.657932070522 6104.078034323626 6684.459776921262 6243.6879375645285 6458.899035428471 7131.289349191548 0.9114698206326316 0.8995258252468651 0.9282914584819661 0.9835134634050351 0.9138847945078921 0.8051360211209823 0.8559571397864575 0.9373423864338163 0.8755342311656945 0.905712658561624 1.0 12.799947226621077 -10.833769446098506 0.9908123893890411 1.0021763139528603 0.8999999884837292 0.0220565988288568 0.051500244311408164 0.4880840013079288 0.8201645389200612 0.036289691749670665 0.008183305930560575 1.4663260628531536e-11 10.833769446098506 -0.10217632546913114 RVTNDIS(ph)PESSPGVGR ddPTM_A549_MK2206_60min_R1 4 RVTNDISPESSPGVGR 16 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 RVT(0.028)NDIS(0.964)PES(0.005)S(0.003)PGVGR;RVTNDIS(1)PESSPGVGR;RVT(0.012)NDIS(0.986)PES(0.002)SPGVGR;RVT(0.134)NDIS(0.862)PES(0.003)S(0.001)PGVGR 137.89 5.0799e-11 35215800.0 5100.700000000001 5725.3 5238.0 4602.85 6024.4 4255.19 4333.97 4718.8099999999995 6696.799999999999 7245.499999999999 7254.9 True False 5961.573459857957 6016.6933152665 5980.827163215712 5730.548456629788 5138.218740474421 4705.471381433478 5121.396249183649 5387.715768249539 5179.985492592108 5608.736517781707 5453.308104946139 1.0932031246227996 1.1033107243306812 1.0967337711564682 1.0508389304892187 0.9422205093847654 0.8628654920791337 0.9391356861972558 0.9879720097536562 0.9498794846918465 1.0285016745513784 1.0 12.412915952850017 -6.59286580377175 3.7732682952537724 0.9632874255716891 1.0959577630436386 0.7058937138904575 0.04016872278978437 0.10069207969154517 2.864288266708505 0.0060192003543596976 0.01328444784184903 2.5534902047358926e-07 6.59286580377175 0.13267033747194945 RVTNDIS(ph)PESSPGVGR ddPTM_A549_PD325901_60min_R1 2 RVTNDISPESSPGVGR 16 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 RVT(0.206)NDIS(0.793)PES(0.001)SPGVGR;RVT(0.077)NDIS(0.905)PES(0.017)S(0.002)PGVGR 77.221 0.00017824 23819500.0 5696.9 5936.9 5544.6 6412.200000000001 6721.0 6414.3 5757.6 6920.3 6959.2 7421.0 8006.8 True False 6275.24509416388 6437.223398552364 5920.8898983883555 6808.267030837199 6248.940146191271 6362.064067454388 5976.708618679613 6782.269187629672 6666.729025269897 6952.436793524219 7022.014359287071 0.8936531275907261 0.9167203410854206 0.8431896597530584 0.9695603971291832 0.8899070589234329 0.9060169549554031 0.8511387634482728 0.9658580630299737 0.949404071846238 0.9900915090452883 1.0 12.777669231044678 -9.092070721442507 0.6453145662419759 0.9922599498498259 0.8970474248168893 0.5144203483166028 0.03572006169222717 0.3502817952756245 0.32301404487276497 0.011672686739815545 0.009316629408012554 8.08964154998327e-10 9.092070721442507 -0.09521252503293665 RVTQGAAS(ph)PGHGIQEK ddPTM_A549_MK2206_60min_R1 1 RVTQGAASPGHGIQEK 16 1 G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58-7;Q9HB58;Q9HB58-6;Q9HB58-4 G5E9C0 SP110 Sp110 nuclear body protein 1 RVT(0.023)QGAAS(0.977)PGHGIQEK 73.294 0.00025397 4486000.0 1355.1 1496.3 1599.6 1312.8 1649.2 1497.4 1432.0 1269.7 1888.3 2236.1 1861.5 True False 1583.8077509858479 1572.4552787859627 1826.447333004935 1634.436058933831 1406.6048646820293 1655.8538741063244 1692.1758638917631 1449.6838632931701 1460.6030649954726 1730.9634569611042 1399.2381752136125 1.1319071899564621 1.1237938662914955 1.3053155390976259 1.16808995629662 1.0052647859377424 1.183396725045424 1.2093551290032734 1.036052252556543 1.0438559287967482 1.2370756370314506 1.0 10.450425840412258 -8.340738580367702 6.24594819105997 1.0219059721963355 1.1601284563844974 0.03880314343528968 0.09419045348950958 0.1583679619060894 10.171546493115152 0.011518554256089357 0.013954382670870806 4.56311505880134e-09 8.340738580367702 0.13822248418816185 RVTQGAAS(ph)PGHGIQEK ddPTM_A549_PD325901_60min_R1 1 RVTQGAASPGHGIQEK 16 1 G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58-7;Q9HB58;Q9HB58-6;Q9HB58-4 G5E9C0 SP110 Sp110 nuclear body protein 1 RVT(0.129)QGAAS(0.871)PGHGIQEK 82.037 9.143e-05 7901700.0 1743.3 1645.6 1682.9 1745.1 2765.0 1914.0 1651.2 2184.4 1893.5 2384.9 2245.3 True False 1920.278532650369 1784.2804872337028 1797.1117140998026 1852.8908635903438 2570.795938732163 1898.413018584677 1714.0373195713105 2140.830428371351 1813.9227798236222 2234.3170069904204 1969.1423341293978 0.9751852364188632 0.9061206273961773 0.9126367774193155 0.9409633988746419 1.3055409424574531 0.9640811563903572 0.8704486668451649 1.0871892758924715 0.9211740301269783 1.1346650611613924 1.0 10.943351680980811 RVTQHES(ph)DNENEIQIQNK ddPTM_A549_MK2206_60min_R1 4 RVTQHESDNENEIQIQNK 18 1 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 RVT(0.001)QHES(0.999)DNENEIQIQNK;RVT(0.035)QHES(0.965)DNENEIQIQNK;RVT(0.114)QHES(0.886)DNENEIQIQNK;RVT(0.002)QHES(0.998)DNENEIQIQNK 251.12 7.899799999999998e-87 136354000.0 9973.3 12658.1 11276.8 10109.6 15649.400000000001 10771.9 10357.0 11243.8 16428.600000000002 17201.4 18468.899999999998 True False 11656.54921622548 13302.343222883508 12876.01980797077 12586.452453837188 13347.393990634833 11911.775308191478 12238.732836820525 12837.643082693341 12707.548331083304 13315.591793108853 13882.562414291002 0.8396540111518593 0.9582051804204241 0.9274959062828289 0.9066375556777925 0.9614503138768348 0.8580386640962799 0.8815903340885913 0.92473152286915 0.9153604321635814 0.959159512180655 1.0 13.760986261672912 -10.473707176952985 0.6636068633263172 1.0048022088334019 0.9087509578523976 0.3361797908219455 0.037373822522543655 0.5644823480131568 0.4186762790949337 0.029578246294788904 0.007156785888796491 3.359640616561345e-11 10.473707176952985 -0.09605125098100431 RVTQHES(ph)DNENEIQIQNK ddPTM_A549_PD325901_60min_R1 3 RVTQHESDNENEIQIQNK 18 1 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 RVT(0.021)QHES(0.979)DNENEIQIQNK;RVT(0.021)QHES(0.979)DNENEIQIQNK;RVT(0.005)QHES(0.995)DNENEIQIQNK 177.47 2.0969e-31 234167000.0 20586.8 22263.0 21269.5 24710.0 23466.1 26269.6 23038.1 26143.0 24667.9 25477.2 29487.1 True False 22676.75678079885 24139.181142005298 22712.97617389372 26236.280579518287 21817.922089650183 26055.669087258124 23914.82750243205 25621.557356213256 23631.19394793299 23868.56524403385 25860.373634127714 0.8768920782672887 0.9334428606301738 0.8782926532785899 1.0145360214322074 0.8436816265043153 1.0075519192372642 0.9247672845249172 0.9907651652179034 0.9137994014420234 0.9229783599311461 1.0 14.658455499098586 RVVLASAS(ph)PR ddPTM_A549_MK2206_60min_R1 1 RVVLASASPR 10 1 O95671;O95671-2 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 RVVLAS(0.1)AS(0.9)PR 48.229 0.01321 2941100.0 934.37 1020.5 910.01 909.45 1252.7 867.53 1234.2 925.24 1639.7 1586.2 1661.7 True False 1092.0688128467611 1072.4390910920763 1039.063101717817 1132.2652908267623 1068.4294894416555 959.331448780193 1458.4381642564347 1056.395603428662 1268.3105680628487 1227.8763183362555 1249.0540294130865 0.8743167125924164 0.8586010419389151 0.8318800286053748 0.9064982492060799 0.855390931282369 0.7680463984660214 1.1676341694696224 0.8457565313848336 1.015416898065499 0.9830449999934894 1.0 10.28662016855786 -7.74102651251945 24.999994060750563 1.003714414341798 0.8516622996180139 0.5025069266924317 0.07589685859140995 142.0143279831671 173927.08357640254 0.010434405821343909 0.01546658826951475 1.815404833768547e-08 7.74102651251945 -0.1520521147237841 RVVLGDGVQLPPGDY(ph)STTPGGT(ph)LFSTTPGGTRIIYDR ddPTM_A549_PD325901_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDR 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.354)S(0.196)T(0.208)T(0.22)PGGT(0.269)LFS(0.242)T(0.233)T(0.2)PGGT(0.051)RIIY(0.027)DR 58.611999999999995 0.00095953 18817000.0 3346.9 3114.9 3034.2 3077.1 3939.6 3618.6 3408.5 3964.7 3488.8 3275.9 3933.9 True False 3686.6748241424434 3377.4035547425015 3240.1190581268183 3267.165478398858 3662.8960868821787 3589.1313213430053 3538.21233270277 3885.6209482530166 3342.177868628812 3069.0591149314096 3450.0552390467356 1.0685842888594117 0.9789418779496678 0.9391499073568679 0.9469893239453143 1.0616920116021829 1.040311262475524 1.0255523716427197 1.1262489087933067 0.9687316976270414 0.8895681089962499 1.0 11.752403745816894 -5.250586816477668 23.65255531649009 0.9989651779293073 1.0685843616822672 0.09750029618293632 0.061876213527581374 1275.101051804736 2778892.431793049 0.007426861037746348 0.14480496803169024 5.615820055843307e-06 5.250586816477668 0.06961918375295995 RVVLGDGVQLPPGDY(ph)STTPGGTLFSTT(ph)PGGTR ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.298)S(0.216)T(0.22)T(0.225)PGGT(0.174)LFS(0.134)T(0.134)T(0.497)PGGT(0.102)R 40.907 0.01426 4426300.0 347.68 476.12 675.55 622.74 879.35 1041.6 630.02 205.87 1269.1 742.14 846.34 True False 406.359884040115 500.35247432705495 771.3531481692195 775.3113279558609 749.9987798679008 1151.821420641878 744.486478889028 235.05270295043303 981.6508763362573 574.4900585613851 636.1704202042919 0.6387594756600309 0.7865069774328363 1.2124945198198884 1.21871640575003 1.1789274635357228 1.810554819999327 1.170262645424402 0.3694807169358033 1.5430627472761498 0.903044279199433 1.0 9.313269482719933 -5.693956942240062 3.4185536271549557 1.2247817846518023 0.6653699168133608 0.17767470911320749 0.34865111078606303 0.2532534344526984 5.742989562466232 0.04882874159880956 0.2225963285729567 2.023219759150686e-06 5.693956942240062 -0.5594118678384415 RVVLGDGVQLPPGDYS(ph)T(ph)TPGGTLFSTTPGGTR ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.102)S(0.396)T(0.39)T(0.397)PGGT(0.123)LFS(0.133)T(0.131)T(0.27)PGGT(0.058)R 40.328 0.02932 18668000.0 1898.2 2163.2 2230.6 2089.9 2533.5 2707.2 2081.4 3165.4 3242.1 3101.3 3314.3 True False 2218.5697534656747 2273.2976402257514 2546.9326212808255 2601.925593819175 2160.825506107156 2993.6741071060806 2459.5634379220082 3614.105143630935 2507.769526569834 2400.714176053606 2491.267839973397 0.8905384310220799 0.9125063165629059 1.0223439569259736 1.044418248439702 0.8673597721753717 1.2016669019169166 0.9872737882524397 1.4507091873628202 1.0066238107086123 0.9636515743241972 1.0 11.282664420905144 -5.759098906858824 3.220496828674578 1.0406909339115582 0.893026623200744 0.14000574860298798 0.14638439816269336 0.3865930103298792 8.104280107497331 0.01965499893489451 0.08460799486349564 1.7414102369204515e-06 5.759098906858824 -0.1476643107108142 RVVLGDGVQLPPGDYS(ph)TTPGGT(ph)LFSTTPGGTR ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.052)S(0.303)T(0.303)T(0.303)PGGT(0.283)LFS(0.239)T(0.237)T(0.236)PGGT(0.045)R 49.199 0.0036983000000000003 5604200.0 409.73 473.88 487.42 435.28 879.66 570.13 588.13 617.78 524.24 442.53 621.05 True False 478.8824070632658 497.9984678948685 556.543485279611 541.9236195404618 750.2631792785553 630.4607781783352 694.9856081219714 705.3522068719022 405.50047703925566 342.56216564956725 466.8261448919766 1.0258260217496582 1.066775015375596 1.192185766305773 1.1608681850196345 1.6071575842269201 1.350525854382521 1.488746111858818 1.5109526631913912 0.868632747921795 0.7338110116536768 1.0 8.866741552126195 -8.775403469605987 24.99992732365952 0.9379654355784733 1.3025123458034948 0.503832416469831 0.18779615818093162 159.94940363265957 286356.62815267744 0.03342613259949445 0.03567112982798157 1.6772450946590578e-09 8.775403469605987 0.3645469102250215 RVVLGDGVQLPPGDYS(ph)TTPGGTLFS(ph)TTPGGTRIIYDR ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDR 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.207)S(0.218)T(0.198)T(0.198)PGGT(0.214)LFS(0.24)T(0.24)T(0.24)PGGT(0.24)RIIY(0.008)DR 51.166000000000004 0.0015475999999999999 18971000.0 1551.3 1845.8 1568.3 1821.4 2171.1 2053.2 1696.0 1373.1 2782.2 1969.6 2646.5 True False 1813.1215143563898 1939.7433359507647 1790.7085223503616 2267.6430817657542 1851.734066038778 2270.4682611961452 2004.1412466204117 1567.74112994239 2152.036142260447 1524.6659920533907 1989.3010103157817 0.9114364819372281 0.9750878956437316 0.9001697144194907 1.13991953455339 0.9308465920624218 1.1413397215516072 1.007460025520358 0.7880864292596558 1.0818051823734975 0.7664330255436633 1.0 10.958045878195621 -6.209301764548189 24.99962937676625 1.0243426933810416 0.9335169917146617 0.0 0.12270791089376439 494.02249209455334 236879.58301790556 0.012818648272819982 0.03391490379199127 6.175871276737098e-07 6.209301764548189 -0.09082570166637982 RVVLGDGVQLPPGDYS(ph)TTPGGTLFS(ph)TTPGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 38 3 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.082)S(0.312)T(0.294)T(0.311)PGGT(0.069)LFS(0.326)T(0.309)T(0.261)PGGT(0.035)RIIY(0.002)DRK 73.65 4.8865e-06 11802000.0 3236.4 3581.2 3139.5 4071.2 4609.0 4332.4 3603.6 4745.2 4193.1 3730.1 3934.1 True False 3564.956945488246 3883.0002922224944 3352.5653493471564 4322.6687776339495 4285.279740186811 4297.118370802643 3740.7369699655833 4650.553263462612 4016.878588898037 3494.5808494171533 3450.2306403146395 1.0332517785428816 1.1254320933943098 0.9716931123889803 1.252863715000731 1.2420270372985907 1.2454582950462618 1.0841991043313126 1.3478963432538849 1.1642348027295133 1.0128542737358768 1.0 11.752477090760523 -10.463534541181028 0.9781388291250541 1.007363796630185 1.164454316490572 0.2512388959142853 0.10323349151953856 0.5564901798165687 1.0138455055229654 0.0541973074284364 0.018975929823067457 3.439263564510631e-11 10.463534541181028 0.15709051986038713 RVVLGDGVQLPPGDYS(ph)TTPGGTLFSTTPGGTR ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDY(0.222)S(0.235)T(0.235)T(0.235)PGGT(0.042)LFS(0.009)T(0.01)T(0.01)PGGT(0.002)R 48.946999999999996 0.0037646 2189900.0 378.18 403.79 276.5 398.33 559.27 476.11 293.77 317.45 376.09 499.04 589.26 True False 442.00753838670767 424.34118627346334 315.71185769934027 495.92086788171343 477.0021238604893 526.4916441837603 347.14420637952725 362.4495096498519 290.90621549231975 386.30651740166786 442.93047925134226 0.9979162850427575 0.9580311271211246 0.7127797080773676 1.1196359047585471 1.0769232333406729 1.1886552604680902 0.7837442276862125 0.8182988677195521 0.656776241689261 0.8721606109713146 1.0 8.79093646618468 -7.802175470057411 24.998378594340977 0.8283272438563316 1.0013274904135914 0.3090905967631201 0.1358007784744147 185.3028711147424 113713.52689371776 0.026132956866929853 0.036108076397066625 1.5769739886931042e-08 7.802175470057411 0.17300024655725976 RVVLGDGVQLPPGDYS(ph)TTPGGTLFSTTPGGTR ddPTM_A549_PD325901_60min_R1 3 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDY(0.229)S(0.243)T(0.243)T(0.243)PGGT(0.039)LFS(0.001)T(0.002)TPGGTR;RVVLGDGVQLPPGDY(0.229)S(0.249)T(0.249)T(0.249)PGGT(0.004)LFS(0.004)T(0.005)T(0.005)PGGT(0.005)R;RVVLGDGVQLPPGDY(0.226)S(0.242)T(0.242)T(0.242)PGGT(0.03)LFS(0.005)T(0.005)T(0.005)PGGT(0.001)R 58.98 0.00089438 8240100.0 3878.95 3759.52 3403.94 3217.63 4221.3 4413.5199999999995 3692.4400000000005 4931.81 4349.83 3867.51 4305.1 True False 4272.738148467933 4076.3479444365857 3634.9518379540586 3416.375697332072 3924.8104506944237 4377.577756417893 3832.957824780697 4833.441180619899 4167.021772041291 3623.314758566613 3775.599992277407 1.1316712991861875 1.079655671356692 0.9627481315258424 0.9048563683440802 1.0395196680586425 1.159438967414919 1.0151917132695756 1.2801783002717964 1.1036714113159487 0.9596659513660669 1.0 11.882490210451191 -7.0054621075570305 24.982914799962614 1.074496820747309 1.013973397321707 0.08708623114142178 0.0978503996212745 550.7976400471374 2519297.8032380524 0.01439161372431172 0.026621330787484496 9.875017920867163e-08 7.0054621075570305 -0.0605234234256018 RVVLGDGVQLPPGDYST(ph)TPGGTLFSTT(ph)PGGTR ddPTM_A549_PD325901_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.027)S(0.145)T(0.632)T(0.196)PGGT(0.005)LFS(0.383)T(0.18)T(0.431)PGGT(0.004)R 106.85 1.1099e-14 23618000.0 3207.8 3654.4 3323.9 3502.3 4421.1 4084.3 3477.3 4188.9 4281.8 3850.2 4583.6 True False 3533.453494542451 3962.3691131179144 3549.479842234437 3718.6291166995925 4110.5771879670065 4051.038814945347 3609.63055435157 4105.349103371523 4101.850836360597 3607.0977149207556 4019.846257834365 0.8790021478199639 0.9857016559764115 0.8829889539473753 0.9250674971591951 1.022570746320413 1.007759639327049 0.8979523899245359 1.0212701780249727 1.0203999290685337 0.8973223062675109 1.0 11.97292461012067 -6.6210550400929655 0.5133323371452297 1.0093734823774718 0.8973701870091133 0.07689494482515147 0.05595735931193434 1.155327135018932 0.436661502843694 0.009659544416482677 0.06111957508900379 2.393012459954918e-07 6.6210550400929655 -0.11200329536835851 RVVLGDGVQLPPGDYST(ph)TPGGTLFSTT(ph)PGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 38 3 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.004)S(0.074)T(0.492)T(0.43)PGGTLFS(0.014)T(0.246)T(0.739)PGGT(0.001)RIIYDRK;RVVLGDGVQLPPGDY(0.001)S(0.1)T(0.477)T(0.422)PGGT(0.001)LFS(0.188)T(0.167)T(0.626)PGGT(0.018)RIIYDRK 163.75 1.7627e-52 109726000.0 18533.0 17095.3 19123.4 21103.0 21122.4 23566.0 21890.0 24431.0 23301.0 21224.9 22982.0 True False 20414.456516726506 18535.980926960565 20421.22892234606 22406.484381609647 19638.835492324146 23374.086309282393 22723.03592866761 23943.70453925126 22321.740001410202 19884.756191735894 20155.359694901264 1.0128549837734122 0.9196551789472477 1.0131909939325991 1.1116886386938485 0.974372861095216 1.1596958160560824 1.1273942153667391 1.1879571936048523 1.1074840806268007 0.9865741168968657 1.0 14.298875909472246 -6.019001725546861 6.025628376074169 1.0724278129463423 0.9656823705614984 0.2970885967254291 0.06964103335641376 0.1634440519925101 22.275448084619274 0.010210825812768073 0.029322721274997132 9.571902681612272e-07 6.019001725546861 -0.10674544238484385 RVVLGDGVQLPPGDYSTT(ph)PGGT(ph)LFSTTPGGTRIIYDR ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDR 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.232)S(0.15)T(0.327)T(0.35)PGGT(0.267)LFS(0.223)T(0.211)T(0.2)PGGT(0.034)RIIY(0.008)DR 50.07 0.0015963 16479000.0 1018.5 1428.2 814.79 1123.3 1687.0 1458.0 1090.9 1358.3 1486.3 1540.1 1853.3 True False 1190.3979000657416 1500.8892796645791 930.339473905408 1398.5085504268534 1438.8445347553875 1612.2845922579274 1289.1024091616796 1550.8431846192905 1149.6554231333841 1192.1903403540962 1393.074461522099 0.8545113222196973 1.07739343525448 0.6678318349823898 1.0039007885470939 1.03285543917249 1.1573570808959597 0.9253650431242436 1.1132521824603765 0.825264876277503 0.8557980016742873 1.0 10.444056658464579 RVVLGDGVQLPPGDYSTT(ph)PGGT(ph)LFSTTPGGTRIIYDRK ddPTM_A549_MK2206_60min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 38 3 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.003)S(0.068)T(0.449)T(0.476)PGGT(0.294)LFS(0.247)T(0.233)T(0.196)PGGT(0.026)RIIY(0.01)DRK;RVVLGDGVQLPPGDY(0.096)S(0.285)T(0.299)T(0.315)PGGT(0.266)LFS(0.23)T(0.219)T(0.209)PGGT(0.028)RIIY(0.053)DRK 74.684 3.7439e-06 16053000.0 3150.39 4152.4 4141.4 4021.7000000000003 4930.6 3784.8 3705.0 3437.8 5144.9 5688.5 5470.4 True False 3682.098812359458 4363.739423665595 4728.7127937650885 5007.016680540973 4205.315271526325 4185.305023853094 4378.1505417031985 3925.1186778209512 3979.588364717051 4403.46389916517 4111.948704640635 0.8954632163100528 1.0612339153795367 1.1499931379076762 1.2176748885243116 1.0227061604101042 1.017839794336362 1.0647386084272246 0.9545641154013346 0.967810799834588 1.0708946573666007 1.0 12.005606552106777 -7.76005658913024 1.3747887435440278 0.9831979964206027 1.0790200409033959 0.08766221305705213 0.08219116867751816 0.46841432630971747 1.7991773228968178 0.013438959597880657 0.021507519082991856 1.737574405815515e-08 7.76005658913024 0.09582204448279319 RVVLGDGVQLPPGDYSTT(ph)PGGT(ph)LFSTTPGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 38 3 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.11)S(0.278)T(0.287)T(0.297)PGGT(0.261)LFS(0.238)T(0.231)T(0.224)PGGT(0.046)RIIY(0.027)DRK;RVVLGDGVQLPPGDY(0.075)S(0.292)T(0.308)T(0.325)PGGT(0.278)LFS(0.239)T(0.227)T(0.216)PGGT(0.031)RIIY(0.01)DRK 66.842 0.0002865 13235800.0 3872.8999999999996 3833.7000000000003 4354.9 4140.8 4399.299999999999 4920.8 4696.8 5139.200000000001 4465.1 4181.1 4654.1 True False 4266.073956921707 4156.779353371323 4650.449702141087 4396.5678115608835 4090.3083447610834 4880.726636286042 4875.539294187579 5036.694624375594 4277.447374803517 3917.104632449009 4081.6752047706873 1.0451772232968202 1.0184003245806657 1.139348299126205 1.0771478843838793 1.002115097247401 1.1957655598322519 1.194494674267325 1.2339773185501566 1.0479636816285651 0.9596806301174264 1.0 11.99494567058256 -8.979035942733802 18.452467461837916 1.0211583707210825 1.1133904255089755 0.30527504887255485 0.07396414539868654 8.60514314424544 7575.179935878552 0.013567472474482346 0.013933959140045154 1.049455570852549e-09 8.979035942733802 0.09223205478789298 RVVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTRIIYDRK ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 38 3 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.074)S(0.29)T(0.308)T(0.327)PGGT(0.069)LFS(0.339)T(0.32)T(0.267)PGGT(0.006)RIIYDRK 81.347 2.1484e-06 15803000.0 664.55 647.02 812.96 716.88 924.77 609.34 847.13 517.18 1070.6 1162.9 1262.8 True False 776.7097933124088 679.9505543541352 928.2499523879043 892.5156321819662 788.7375580354118 673.8199543528439 1001.0425555716685 590.4918487973237 828.1108093968923 900.2000823308742 949.211908493016 0.8182680667644864 0.7163316729070914 0.9779164632074715 0.940270159061677 0.8309393834803697 0.7098730518695359 1.0546038736080963 0.6220864314005478 0.8724193217419851 0.94836576983115 1.0 9.890586389986368 -10.086618497782023 0.9387459504905209 0.9878630108337818 0.8399012916549824 0.15475453697543884 0.12021102018931479 0.5889205577106573 1.0403536704580696 0.046114688743436445 0.02195785875700266 8.191840773041094e-11 10.086618497782023 -0.1479617191787994 RVVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 38 3 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.139)S(0.09)T(0.331)T(0.349)PGGT(0.191)LFS(0.279)T(0.268)T(0.258)PGGT(0.068)RIIY(0.027)DRK 46.28 0.0026886999999999996 7429800.0 1872.0 1660.9 1759.5 1354.6 1432.8 1421.9 1429.4 1499.2 1549.9 1553.4 1570.0 True False 2062.0440619064375 1800.8698719290564 1878.9102507330233 1438.27056548019 1332.1650708916604 1410.320517829442 1483.7965991976932 1469.2972799003524 1484.7630929224365 1455.3180588950984 1376.899953049995 1.4975990501987946 1.3079162853771027 1.3645946073068103 1.0445715843727439 0.9675104338123902 1.0242723261813007 1.0776357395545766 1.0671053308162923 1.0783376741596309 1.0569526534381806 1.0 10.427208020255264 -6.251377161260405 4.93192231510771 1.036793470609427 1.3861842419909423 0.9005796520010035 0.05189869472197208 0.04090174415664008 2.9960742575544295 0.0074645440539882904 0.019360111567040945 5.605609477297779e-07 6.251377161260405 0.3493907713815152 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR ddPTM_A549_MK2206_60min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.001)S(0.049)T(0.218)T(0.732)PGGT(0.001)LFS(0.101)T(0.262)T(0.635)PGGT(0.001)R;RVVLGDGVQLPPGDY(0.085)S(0.131)T(0.36)T(0.414)PGGT(0.011)LFS(0.071)T(0.354)T(0.567)PGGT(0.006)R 111.64 3.307e-15 30487000.0 2155.04 2668.8 2666.3 3087.0 3589.3 3250.1000000000004 3407.4 3401.0 5300.3 4003.6 4276.4 True False 2518.758066330558 2804.6305206335455 3044.421432852623 3843.3151385806973 3061.3187247169594 3594.023424758225 4026.480473899998 3883.1021651256756 4099.790512839855 3099.183979379042 3214.4518573642167 0.7835731185583494 0.8725066185726869 0.9471043798269808 1.195636241922794 0.9523610433622038 1.1180828284998017 1.2526180675798415 1.208013788176544 1.2754244564115507 0.9641407359325979 1.0 11.650357028409989 -5.763396527754723 0.9270975282480524 1.1434709409224995 0.7113786073615874 0.5264700944810417 0.10882927753513377 0.6961194759361772 0.7115615831455153 0.0187508467162482 0.25232966615337654 1.7242628540098174e-06 5.763396527754723 -0.43209233356091203 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR ddPTM_A549_PD325901_60min_R1 5 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.001)S(0.041)T(0.197)T(0.759)PGGT(0.007)LFS(0.047)T(0.232)T(0.704)PGGT(0.012)R;RVVLGDGVQLPPGDY(0.004)S(0.108)T(0.409)T(0.478)PGGT(0.002)LFS(0.069)T(0.356)T(0.564)PGGT(0.011)R;RVVLGDGVQLPPGDY(0.051)S(0.115)T(0.281)T(0.637)PGGT(0.118)LFS(0.123)T(0.189)T(0.419)PGGT(0.067)R;RVVLGDGVQLPPGDY(0.032)S(0.289)T(0.321)T(0.356)PGGT(0.022)LFS(0.087)T(0.231)T(0.651)PGGT(0.011)R;RVVLGDGVQLPPGDY(0.07)S(0.144)T(0.37)T(0.41)PGGT(0.015)LFS(0.298)T(0.22)T(0.464)PGGT(0.009)R 105.1 1.3952000000000001e-14 85959200.0 17586.3 18608.6 18008.899999999998 19288.3 21889.300000000003 19720.9 20524.3 20565.0 19831.9 20705.9 21603.5 True False 19371.648229650204 20176.812028887387 19231.09225031312 20479.694484092375 20351.871081985522 19560.29952884357 21305.36346782791 20154.81494206959 18998.43421028999 19398.52594030899 18946.406455869786 1.0224444553520424 1.0649413690075464 1.015025846463625 1.0809276435504507 1.074181065912914 1.032401557224251 1.1245068302241186 1.063780352702474 1.002746048679014 1.023863073216142 1.0 14.209636619506586 -8.76410456516863 23.78108664880035 1.0012967364052934 1.0608870608634282 0.3641239025088985 0.0294744415467282 22.811053535297155 203539.80511470852 0.004744098133910164 0.005163866708898392 1.721454050251963e-09 8.76410456516863 0.059590324458134836 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTRIIYDR ddPTM_A549_MK2206_60min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDR 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.07)S(0.168)T(0.389)T(0.421)PGGT(0.219)LFS(0.174)T(0.162)T(0.357)PGGT(0.037)RIIY(0.003)DR;RVVLGDGVQLPPGDY(0.036)S(0.16)T(0.177)T(0.627)PGGT(0.016)LFS(0.209)T(0.189)T(0.536)PGGT(0.05)RIIYDR 93.088 1.5472e-09 70418000.0 4142.1 3945.0 3506.5 3911.7 5553.299999999999 4981.4 4557.6 3642.2 6119.0 5620.700000000001 5305.4 True False 4841.185215377815 4145.78364954262 4003.7744268453393 4870.066675602886 4736.416926412024 5508.528441614293 5385.656925470044 4158.493003769699 4733.056270035106 4350.9799662543155 3987.922758408969 1.213961630818864 1.0395847414047286 1.0039749186222189 1.221203862420309 1.1876902370851525 1.381302691983931 1.3504917852568235 1.042771702385926 1.1868475285924085 1.0910391774965553 1.0 11.961421751283973 -10.6010890456188 0.7475995924568895 0.9923099039421511 1.1814965935846458 0.1544540899986896 0.11637758432650891 0.9083820513610558 0.8477419566436188 0.10224644829897221 0.023743356622190834 2.5055954653086716e-11 10.6010890456188 0.18918668964249463 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTRIIYDR ddPTM_A549_PD325901_60min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDR 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.002)S(0.02)T(0.061)T(0.915)PGGT(0.001)LFS(0.065)T(0.207)T(0.706)PGGT(0.022)RIIYDR;RVVLGDGVQLPPGDY(0.122)S(0.066)T(0.195)T(0.596)PGGT(0.023)LFS(0.109)T(0.248)T(0.588)PGGT(0.052)RIIYDR 145.77 4.7543e-40 158112000.0 11109.9 10519.9 11215.400000000001 11405.6 12337.599999999999 11827.900000000001 11101.3 12030.2 11952.3 12479.400000000001 12918.0 True False 12237.768869323898 11406.448892592258 11976.544487678973 12110.098008002984 11471.049538409377 11731.577503927741 11523.766046364446 11790.24822349067 11449.986396242874 11691.448554252267 11329.167893948934 1.0802001509625663 1.0068214187808622 1.0571424662243563 1.068930933089195 1.0125235715269278 1.0355197851903792 1.0171767383303985 1.0406985167717397 1.0106643756562625 1.031977693657169 1.0 13.467754281364664 -7.851683122184141 0.2915800713600265 0.9961378935763444 1.0596020885054205 0.20875246053261554 0.022616648053929156 1.2595141562072505 0.2668755050182381 0.01424189200891382 0.0283310479742338 1.4070738043843522e-08 7.851683122184141 0.06346419492907607 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTRIIYDRK ddPTM_A549_MK2206_60min_R1 4 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 38 3 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.003)S(0.01)T(0.046)T(0.942)PGGT(0.002)LFS(0.056)T(0.204)T(0.731)PGGT(0.007)RIIYDRK;RVVLGDGVQLPPGDY(0.007)S(0.076)T(0.436)T(0.48)PGGT(0.079)LFS(0.149)T(0.136)T(0.631)PGGT(0.004)RIIY(0.002)DRK;RVVLGDGVQLPPGDY(0.003)S(0.071)T(0.436)T(0.491)PGGT(0.001)LFS(0.191)T(0.133)T(0.497)PGGT(0.179)RIIYDRK;RVVLGDGVQLPPGDY(0.122)S(0.269)T(0.291)T(0.316)PGGT(0.172)LFS(0.139)T(0.13)T(0.541)PGGT(0.019)RIIYDRK 127.17 9.990499999999998e-30 139015000.0 10262.5 12695.099999999999 13218.400000000001 12184.0 15358.7 12221.9 13153.5 10405.5 18237.6 16906.9 19249.399999999998 True False 11994.559105964321 13341.226364843722 15092.967883591176 15169.080546960544 13099.455575546861 13515.213345759379 15543.320688338206 11880.511490507262 14106.81271946271 13087.619547647992 14469.242723586853 0.8289693755991488 0.9220404011258786 1.0431069664058898 1.0483672737228231 0.9053311099822072 0.9340650097553291 1.0742318022629103 0.8210873034246912 0.9749516950508176 0.9045130970339846 1.0 13.820701797098776 -5.419124767349842 0.0077903574856741835 1.8841776259603158 1.9951468405937578e-05 0.0 0.08355376836612043 18682.935953463424 22.374837385675338 2554.1534729304512 2864.237921546403 3.809563636929114e-06 5.419124767349842 -1.88415767449191 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 38 3 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDYS(0.001)T(0.066)T(0.934)PGGTLFS(0.011)T(0.075)T(0.914)PGGT(0.001)RIIYDRK;RVVLGDGVQLPPGDY(0.002)S(0.02)T(0.117)T(0.859)PGGT(0.048)LFS(0.151)T(0.136)T(0.663)PGGT(0.003)RIIYDRK 188.18 2.1140999999999995e-81 104470000.0 17678.4 17957.4 20739.9 20093.3 21443.4 22516.0 22522.1 22085.0 21430.1 23412.0 23231.0 True False 19473.098153849773 19470.733119500786 22147.434333150228 21334.417505804737 19937.289559714027 22332.63716115601 23379.19084006602 21644.497349652655 20529.46742218019 21933.762324483087 20373.73427344232 0.9557942541359957 0.9556781716192982 1.0870581718551209 1.0471530265129008 0.9785780697897288 1.0961484459070014 1.1475162346915162 1.0623726146201293 1.0076438195692419 1.0765705505973102 1.0 14.314422813658858 -4.018395898182353 12.849491073548256 1.0221024725347798 0.6145732316697741 0.0 0.061826413936345526 0.0 0.0 0.008187137521368276 0.0 9.585264507183396e-05 4.018395898182353 -0.40752924086500575 RVVLGDGVQLPPGDYSTTPGGT(ph)LFSTTPGGTR ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 RVVLGDGVQLPPGDY(0.109)S(0.121)T(0.121)T(0.115)PGGT(0.127)LFS(0.127)T(0.127)T(0.127)PGGT(0.024)R 41.89 0.033888999999999996 4252700.0 635.7 478.89 385.27 564.52 794.7 627.78 573.93 670.34 831.61 720.26 718.22 True False 742.990618627189 503.2634554954284 439.90707926157233 702.8274253422655 677.8006827327242 694.2112629133626 678.205651929748 765.3627478301518 643.2516628082851 557.5527657577048 539.8661521364064 1.3762496790861223 0.9322004232046581 0.8148447120100656 1.301854955271736 1.2554976452042252 1.2858951430204837 1.2562477740934344 1.4176898195995251 1.1915021163352293 1.0327611085660906 1.0 9.07645795707916 -4.329428476691843 13.628383601127688 1.1416574856007875 1.1378646438627786 0.0 0.18802180610028718 43896981.31281014 0.0 0.025911033700881332 0.0 4.683510770604048e-05 4.329428476691843 -0.0037928417380088675 RVVLGDGVQLPPGDYSTTPGGTLFS(ph)TTPGGT(ph)RIIYDR ddPTM_A549_PD325901_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDR 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.112)S(0.121)T(0.123)T(0.125)PGGT(0.113)LFS(0.314)T(0.314)T(0.357)PGGT(0.334)RIIY(0.086)DR 43.781000000000006 0.014925999999999998 17675000.0 1660.8 1925.0 1647.7 1961.7 1829.0 1967.1 1987.4 2034.4 1524.1 2040.9 2071.9 True False 1829.403193383659 2087.226505788087 1759.522830425008 2082.8697536560526 1700.5373497074586 1951.080589789927 2063.03159454701 1993.8222960440737 1460.0473772005191 1912.037225697827 1817.069434856232 1.0067877199906798 1.1486773514261606 0.9683299915086749 1.146279670826586 0.935868116587414 1.0737512570312417 1.1353620037696792 1.097273586687031 0.8035176582649629 1.0522642608036104 1.0 10.82739783434352 -8.744506200923459 24.99981161269164 0.9072166655864389 1.0648419326542164 0.1931538903610287 0.0901941955009078 182.3423400171209 269206.51255055703 0.015428363026441785 0.017471843996768485 1.8009174204822235e-09 8.744506200923459 0.15762526706777757 RVVLGDGVQLPPGDYSTTPGGTLFST(ph)T(ph)PGGTR ddPTM_A549_MK2206_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.063)S(0.071)T(0.291)T(0.295)PGGT(0.278)LFS(0.285)T(0.288)T(0.346)PGGT(0.084)R 49.148 0.0038951 9397600.0 1684.3 1907.7 1654.8 1776.5 2408.1 2258.4 2562.4 2293.8 3471.3 2482.1 3155.1 True False 1968.568662818585 2004.7937815544867 1889.4755230411133 2211.742579750116 2053.871679990781 2497.3823889954083 3027.9549117571614 2618.9531744678866 2685.0560925270265 1921.3918861066836 2371.6015936698745 0.8300587535752046 0.8453332916057876 0.7967086580159075 0.9325944904294027 0.8660272810883761 1.0530362248285123 1.276755303183799 1.1042972738162375 1.1321699646744228 0.8101663834411051 1.0 11.21164595596561 -7.278262579005918 4.365301546853659 1.0855038663555048 0.853115153705969 0.46780709080982597 0.10977886084024949 0.10283739530359227 4.936444970480308 0.012721223385962441 0.021330887685963133 5.2691118905622166e-08 7.278262579005918 -0.23238871264953576 RWDQTADQT(ph)PGATPK ddPTM_A549_MK2206_60min_R1 4 RWDQTADQTPGATPK 15 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 RWDQT(0.009)ADQT(0.847)PGAT(0.144)PK;RWDQT(0.001)ADQT(0.998)PGAT(0.001)PK;RWDQT(0.048)ADQT(0.951)PGAT(0.001)PK;RWDQT(0.005)ADQT(0.994)PGAT(0.001)PK 65.423 0.0023090999999999997 183247700.0 11000.07 11153.19 11076.69 9025.05 15017.3 10438.0 10383.9 9839.42 17019.1 16087.199999999999 17682.7 True False 12856.612890109134 11720.839731873824 12647.531200939256 11236.187655149883 12808.275063297013 11542.542231816367 12270.52021862128 11234.187916959983 13164.301023918046 12453.090346954361 13291.597572307146 0.9672737095874543 0.8818232472140164 0.9515433439912601 0.8453602055000762 0.9636369889788773 0.868408945502916 0.9231787339233571 0.8452097541958579 0.9904227804297716 0.9369144889625757 1.0 13.698226898093342 -8.855850307243424 9.08619584428202 0.9957225814553237 0.9058302049480026 0.2988499507290586 0.0450291933026742 0.1496991910595026 13.083724346250536 0.006302216605700519 0.006701224988431582 1.393637079429941e-09 8.855850307243424 -0.08989237650732107 RWDQTADQT(ph)PGATPK ddPTM_A549_PD325901_60min_R1 2 RWDQTADQTPGATPK 15 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 RWDQTADQT(1)PGATPK;RWDQTADQT(1)PGATPK 133.47 1.1592e-09 314550000.0 8872.8 8471.6 8185.299999999999 8436.900000000001 8649.8 10371.2 8913.5 9461.3 9988.8 9464.4 11365.6 True False 9773.560124189866 9185.531463082783 8740.803680207453 8958.028151409875 8042.2678881900365 10286.740385760399 9252.70812015436 9272.586949253731 9569.005472987697 8866.816168795394 9967.703252474534 0.9805227820926079 0.9215293865015923 0.8769125102151796 0.8987053410910882 0.8068325956828121 1.0320070858055153 0.9282688183817399 0.9302631423093142 0.9600010384149571 0.8895545888762451 1.0 13.283045403329377 -7.277481625067415 24.994776555588473 0.9752118272837056 0.8972586082238525 0.19491511748037105 0.05372288983070321 646.6319763424726 1007489.039011747 0.007131301543898892 0.011420972617337492 5.278595399648862e-08 7.277481625067415 -0.07795321905985308 RWDQTADQTPGAT(ph)PKK ddPTM_A549_PD325901_60min_R1 2 RWDQTADQTPGATPKK 16 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 RWDQTADQT(0.046)PGAT(0.954)PKK;RWDQTADQT(0.196)PGAT(0.804)PKK 111.57 1.3e-07 30575000.0 6882.3 5379.1 5929.3 6212.5 5996.2 6891.1 5651.2 5212.4 7854.2 6386.2 7859.4 True False 7580.98602951852 5832.415634953095 6331.697953777386 6596.232015388804 5575.047597767015 6834.9811663369255 5866.259508455298 5108.434592951306 7524.1152877162385 5982.974242124292 6892.743624841481 1.0998502834483224 0.8461674990976077 0.9186034325951014 0.9569820632260212 0.8088285160751543 0.9916198161938914 0.8510775719719605 0.7411322502320387 1.0915994699990423 0.8680105583155051 1.0 12.750862640026183 -8.797591458638328 24.99995952988226 1.0432553243107712 0.900535226210357 0.0456311453704179 0.106888205245342 140.62924987019184 97247.63343255717 0.015638597426189366 0.016648824379919956 1.5937072244984924e-09 8.797591458638328 -0.1427200981004142 RWEDLKSRLK ddPTM_A549_MK2206_60min_R1 1 RWEDLKSRLK 10 3 A0A3B3ISV8;Q8IZF0 A0A3B3ISV8 NALCN Sodium leak channel non-selective protein 0 41.18899999999999 0.060063 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 RWEKPS(ph)PSNVTER ddPTM_A549_PD325901_60min_R1 1 RWEKPSPSNVTER 13 2 Q562F6-2;Q562F6 Q562F6-2 SGOL2 Shugoshin-like 2 1 RWEKPS(0.765)PS(0.231)NVT(0.005)ER 40.844 0.02103 2741100.0 2263.1 2368.7 1928.6 2470.8 2247.8 2583.1 2254.2 2562.9 2840.0 2960.2 3258.1 True False 2492.8482459938346 2568.3186619533717 2059.486393613929 2623.4157044060635 2089.922282489025 2562.064090024077 2339.9848145455717 2511.780948943845 2720.6446763660356 2773.2924668091077 2857.3743547975705 0.8724261984812415 0.8988387040154993 0.7207618386285379 0.9181211065331054 0.7314135366897294 0.8966497811959208 0.8189283320950597 0.8790521076548933 0.9521484896783077 0.9705737234439414 1.0 11.480474345937965 -8.765089084355964 1.3307709589265977 0.9844256920166364 0.8337629436561224 0.49081420107601814 0.061261793044050716 0.20489113982932897 0.7144186205900931 0.011350159236470736 0.012086588362012603 1.7175560385237952e-09 8.765089084355964 -0.15066274836051408 RWIS(ph)FK ddPTM_A549_PD325901_60min_R1 2 RWISFK 6 1 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 RWIS(1)FK;RWIS(1)FK 89.296 0.015916999999999997 5013900.0 1457.6999999999998 1928.55 1537.08 1521.99 1494.9 1661.44 1203.1 1508.33 1835.1799999999998 2722.9 2737.6 True False 1605.684630897978 2091.0756767468138 1641.3954920129104 1615.9998656099172 1389.9033811250317 1647.909783488676 1248.8846288615807 1478.245174888006 1758.053766610358 2550.9756293069795 2400.892555076221 0.6687865425310556 0.8709576246240759 0.6836605363878107 0.6730829591658316 0.5789111129468709 0.6863738154398 0.5201751432903804 0.6157065095489357 0.7322500804516615 1.0625113664138934 1.0 11.229355126078326 -10.110082620175879 0.7816859551082497 0.9856509920768701 0.6668046283197524 0.702666504747478 0.0891361101845183 0.28036760121843646 0.33844467931111016 0.046155389945497005 0.018772754920274963 7.760994574343759e-11 10.110082620175879 -0.3188463637571177 RWPQT(ph)PK ddPTM_A549_PD325901_60min_R1 1 RWPQTPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RWPQT(1)PK 75.378 0.011212999999999999 6927700.0 1765.2 1547.6 1152.6 1267.8 1377.0 1595.3 1529.1 1114.7 1890.2 2148.3 2147.1 True False 1944.401804528441 1678.021683302673 1230.8223671468497 1346.1091266172932 1280.2842703921108 1582.308405720029 1587.290737255626 1092.4664340347674 1810.7614673475618 2012.6559713688293 1883.020311588307 1.0325973610387449 0.8911330764601684 0.6536426397379986 0.7148670241808835 0.6799099630062965 0.840303418918179 0.842949344458618 0.5801671003289837 0.9616260941020888 1.0688445360800043 1.0 10.878832846626803 -8.961299862404298 24.144066754242438 0.9830704718265236 0.7772282109620694 0.41439763484484937 0.12120437406421135 81.42073498489924 50796.68052210338 0.02051153662359944 0.0217923458362136 1.093201295281965e-09 8.961299862404298 -0.20584226086445423 RWQS(ph)PVTK ddPTM_A549_MK2206_60min_R1 4 RWQSPVTK 8 1 A9Z1X7;M0R088 A9Z1X7 SRRM1 1 RWQS(0.989)PVT(0.011)K;RWQS(0.969)PVT(0.031)K;RWQS(0.953)PVT(0.047)K;RWQS(1)PVTK 80.24 0.0016501999999999999 237775000.0 14844.9 14269.400000000001 12100.6 11737.8 19176.699999999997 14929.300000000001 13591.5 12817.3 20375.399999999998 19487.800000000003 19262.0 True False 17350.356197040666 14995.651510464751 13816.647035358537 14613.56152692986 16355.832833220868 16509.108616732705 16060.899618774372 14634.191526334993 15760.404432827805 15085.492445135098 14478.713795844533 1.1983354627826341 1.0357032898024812 0.9542730956753899 1.0093135158955922 1.129646808676823 1.1402330931819997 1.109276683360088 1.010738366175529 1.088522409867037 1.041908325411109 1.0 13.821645827082822 -10.859932697028537 0.8744581118283243 0.9953938036720426 1.07250696388945 0.0748745958368705 0.06742376785037885 1.2052164958820197 1.4658753479354067 0.0646131702521923 0.012335579223572962 1.3805982004591157e-11 10.859932697028537 0.07711316021740744 RWQS(ph)PVTK ddPTM_A549_PD325901_60min_R1 4 RWQSPVTK 8 1 A9Z1X7;M0R088 A9Z1X7 SRRM1 1 RWQS(1)PVTK;RWQS(0.963)PVT(0.037)K;RWQS(0.994)PVT(0.006)K;RWQS(1)PVTK 115.57 0.0010249 318352600.0 16273.7 15164.8 13902.1 14912.2 14351.2 16669.2 15218.699999999999 13699.9 19501.9 17200.2 21104.5 True False 17925.794043935242 16442.790916870228 14845.580106118532 15833.29272593657 13343.221220952262 16533.451561855654 15797.855956492182 13426.644747136354 18682.302962684065 16114.176436595513 18508.78029244816 0.9685021790036169 0.8883778756387917 0.8020831125309611 0.8554476565047765 0.720913048300459 0.8932761262826991 0.853533064139182 0.7254202889109129 1.009375154250802 0.8706233572382035 1.0 14.17592220592946 -8.788131002008587 24.9770142071767 1.0044272005608124 0.8378763659695192 0.2766793845749177 0.07908110536026695 110.65672840158848 103547.87773726194 0.011406787422942004 0.012145054847599654 1.628804640569459e-09 8.788131002008587 -0.16655083459129316 RWS(ph)AEVTSSTYSDEDRPPK ddPTM_A549_MK2206_60min_R1 4 RWSAEVTSSTYSDEDRPPK 19 2 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 RWS(1)AEVTSSTYSDEDRPPK;RWS(0.998)AEVT(0.001)SSTYSDEDRPPK;RWS(1)AEVTSSTYSDEDRPPK;RWS(1)AEVTSSTYSDEDRPPK 169.28 1.0914e-34 204394000.0 16223.8 14876.6 12041.5 10907.54 19988.2 16381.1 13116.779999999999 15742.240000000002 22623.199999999997 20301.5 24312.9 True False 18961.98080617237 15633.755396903865 13749.165766678503 13579.887789658078 17047.96225820842 18114.53712910586 15499.929139649572 17973.750728588067 17499.0813218268 15715.3770499959 18275.33592809619 1.0375722164986607 0.8554565266769624 0.7523345026747645 0.7430718561392128 0.9328398846009268 0.991201321845848 0.8481337470694723 0.9834976932465318 0.9575244685337911 0.8599227457064331 1.0 14.157610304870484 -7.81445164647612 0.7933732244606087 0.9830978243895028 0.8527924895743826 0.07172607206268444 0.0923080089779649 0.5852208910703669 0.7432162746843235 0.01737326944782443 0.030686213976943887 1.5330218806099603e-08 7.81445164647612 -0.1303053348151202 RWS(ph)AEVTSSTYSDEDRPPK ddPTM_A549_PD325901_60min_R1 4 RWSAEVTSSTYSDEDRPPK 19 2 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 RWS(1)AEVTSSTYSDEDRPPK;RWS(0.993)AEVT(0.005)S(0.001)STYSDEDRPPK;RWS(1)AEVTSSTYSDEDRPPK;RWS(1)AEVTSSTYSDEDRPPK 254.68 1.0159999999999998e-97 223948000.0 26852.1 24904.9 25905.9 24069.4 26351.399999999998 27593.8 22302.0 24478.1 29206.8 32110.2 33432.7 True False 29578.10542452874 27003.72332675416 27664.030158831836 25556.112172426463 24500.56857139482 27369.08524149522 23150.71481412268 23989.865092802032 27979.339765382927 30082.75649203898 29320.68984734685 1.0087793151703484 0.9209784444821871 0.9434986114876516 0.8716067836561822 0.8356068257245254 0.933439335294895 0.7895692405142208 0.8181889722820697 0.9542524378195931 1.0259907474435186 1.0 14.839631426665047 -8.953753024239838 6.884479701252212 0.9801198044756774 0.8883076481625243 0.3630462808085868 0.06098778606496567 0.17839432740002822 19.41664050230279 0.010880508441494593 0.01142153185329327 1.1123641296871413e-09 8.953753024239838 -0.09181215631315309 RWS(ph)APESR ddPTM_A549_MK2206_60min_R1 2 RWSAPESR 8 1 P54253 P54253 ATXN1 Ataxin-1 1 RWS(1)APESR;RWS(1)APESR 108.7 0.00072363 26796000.0 1334.8899999999999 1501.3899999999999 870.94 951.01 2092.05 1746.15 1553.53 1421.26 2318.7 2475.4 2107.66 True False 1560.1867970729077 1577.8043380448132 994.45238822663 1184.007492692462 1784.3122163218773 1930.9264339994386 1835.7862917819634 1622.7279574262045 1793.5181522030402 1916.2054207600352 1584.2698535432294 0.9847986399435299 0.9959189304246647 0.6277039142053552 0.7473521572378732 1.1262678591852593 1.2188115741020442 1.1587585837578214 1.0242749704521381 1.1320786974465402 1.2095195881398801 1.0 10.629602379681867 -6.767844804228734 24.998368002965037 1.0839154068017616 0.8350674045541792 0.560846104595794 0.1180421347470889 97.79632048683243 381670.1083308048 0.01759765629686005 0.033832223334488674 1.7066921689981744e-07 6.767844804228734 -0.2488480022475824 RWS(ph)APESR ddPTM_A549_PD325901_60min_R1 2 RWSAPESR 8 1 P54253 P54253 ATXN1 Ataxin-1 1 RWS(1)APESR;RWS(1)APESR 107.03 0.00077807 39803000.0 3215.7 2863.8 3129.2 2620.8 2729.3 2494.5 2706.8 2202.86 3314.3 3454.3 4331.3 True False 3542.155496726778 3105.1424765069737 3341.566329408225 2782.6808637313466 2537.603383573848 2474.185619048839 2809.8087552177926 2158.92222918976 3175.0114967887157 3236.194908485476 3798.577558372894 0.9324952412565841 0.8174487499044377 0.8796888514340542 0.7325586541198061 0.6680404294971986 0.6513452946604167 0.7397002462209468 0.5683501774054933 0.8358422193566372 0.8519491464251391 1.0 11.891243562780291 -9.689410999432724 1.1269295966451522 0.9687358626542297 0.7513511509846603 0.25093379786217873 0.10701804702780618 0.2983159600688946 0.777712975416839 0.030978430800917594 0.021010173763793244 2.0445088770983657e-10 9.689410999432724 -0.2173847116695694 RWS(ph)EDCRLEGGGGPAGGFEDEGEDK ddPTM_A549_MK2206_60min_R1 2 RWSEDCRLEGGGGPAGGFEDEGEDK 25 2 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 RWS(1)EDCRLEGGGGPAGGFEDEGEDK;RWS(1)EDCRLEGGGGPAGGFEDEGEDK 65.69 7.7289e-05 11200200.0 2948.3 2795.7 1873.4099999999999 1933.7 3644.3 3006.8999999999996 2902.4 3215.0 4090.5 4084.1 4969.799999999999 True False 3445.9009609855893 2937.9891885998204 2139.0877082550483 2407.456586807091 3108.2282975750177 3325.0881621813196 3429.728510725877 3670.7360955245645 3164.008281186242 3161.4989734693636 3735.6615004977757 0.9224339412247132 0.7864709337846414 0.5726128312134318 0.6444525518402291 0.8320422760897493 0.8900935381158739 0.9181047346685097 0.9826201049092483 0.8469740314438658 0.8463023143419431 1.0 11.867148018703764 -7.096258794002238 2.776451356924065 0.9281370082209177 0.7250435467611764 0.44396848068461814 0.09380994577128061 0.18878391121682575 2.834115825950024 0.015047028954074863 0.028154711219566735 8.012004895744801e-08 7.096258794002238 -0.20309346145974128 RWS(ph)EDCRLEGGGGPAGGFEDEGEDKK ddPTM_A549_MK2206_60min_R1 2 RWSEDCRLEGGGGPAGGFEDEGEDKK 26 3 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 RWS(1)EDCRLEGGGGPAGGFEDEGEDKK;RWS(1)EDCRLEGGGGPAGGFEDEGEDKK 132.13 1.3200000000000001e-24 24848000.0 6913.0 6712.1 5430.6 4349.6 7126.1 5491.0 5464.4 5143.1 8659.3 7227.0 8543.5 True False 8079.745393376992 7053.717220302914 6200.740739320208 5415.252195260966 6077.860129887591 6072.05397536919 6457.210747660718 5872.1501750831685 6697.982376060633 5594.415680630512 6421.913161395383 1.258152390154928 1.0983825291667833 0.9655597301743772 0.8432459392030014 0.9464251504402101 0.9455210344279751 1.005496428459594 0.9143926470982116 1.0429886246866136 0.8711447103116746 1.0 12.648787441399504 -5.424700836636346 2.73107833252652 0.9884586268039335 1.2681097798881826 0.6340376431651573 0.06643285446541158 0.1702819677855507 2.034561756549568 0.009102996927379696 0.08867648699106384 3.760963887370675e-06 5.424700836636346 0.27965115308424915 RWS(ph)EDCRLEGGGGPAGGFEDEGEDKK ddPTM_A549_PD325901_60min_R1 1 RWSEDCRLEGGGGPAGGFEDEGEDKK 26 3 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 RWS(1)EDCRLEGGGGPAGGFEDEGEDKK 49.453 0.0028417 4167400.0 2177.4 2504.9 2231.8 2665.4 2124.6 2354.3 2077.7 2539.9 3000.6 3793.8 4167.6 True False 2398.4480450828387 2715.996713947314 2383.263368903643 2830.0357044373973 1975.3754254720996 2335.1273613656763 2156.7680104610645 2489.2397019869964 2874.4952168675777 3554.2588205460415 3655.0116205930926 0.6562080491261603 0.743088393657855 0.6520535681681129 0.7742891126508025 0.540456674430917 0.6388837037368322 0.5900851308678163 0.6810483687554109 0.7864530992656976 0.9724343420744851 1.0 11.83566027769216 -9.622689538692994 0.7294827321935738 0.9766450506654418 0.6567171410611933 0.7818368541553826 0.06525662924753266 0.1949665863558656 0.22245525885346545 0.02705218408766715 0.01555609001608942 2.384023111640576e-10 9.622689538692994 -0.31992790960424855 RWS(ph)GNEPTDEFSDLPLR ddPTM_A549_MK2206_60min_R1 2 RWSGNEPTDEFSDLPLR 17 1 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 RWS(1)GNEPTDEFSDLPLR;RWS(0.978)GNEPT(0.022)DEFSDLPLR 109.05 3.0923e-09 9606600.0 1563.24 1780.46 1397.02 1344.0 2529.8 1965.2199999999998 1808.21 1760.71 2719.2 2191.92 1926.8400000000001 True False 1827.0766944514182 1871.0778090404683 1595.1384428323045 1673.2800603344522 2157.6697712057958 2173.1782759925413 2136.7383511506464 2010.2960344482292 2103.30554167012 1696.763749645446 1448.3524499213518 1.261486245665295 1.2918663610794952 1.1013468737660668 1.1552989470382808 1.4897408233216722 1.500448510381951 1.475288940386489 1.3879881478830598 1.4522056021545953 1.1715130179381292 1.0 10.500197003022993 -10.847655102645263 1.0865426840740318 0.9994056053415901 1.3522219999730771 0.3285752863234548 0.13672501891942251 0.37971216275599445 0.7935677047983388 0.10153754939118402 0.024651449711590855 1.4201849216417756e-11 10.847655102645263 0.35281639463148706 RWS(ph)GNEPTDEFSDLPLR ddPTM_A549_PD325901_60min_R1 2 RWSGNEPTDEFSDLPLR 17 1 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 RWS(1)GNEPTDEFSDLPLR;RWS(0.996)GNEPT(0.004)DEFSDLPLR 128.01 2.4275e-12 16458100.0 794.13 548.1700000000001 976.9100000000001 1026.92 822.5699999999999 928.8 711.03 880.03 1095.13 920.3999999999999 1394.65 True False 874.7494929923928 594.3662097027824 1043.2089872370548 1090.350516095465 764.7955209124464 921.2361607426587 738.0886357405457 862.4771112798202 1049.1054945171609 862.2857869235536 1223.1168914147618 0.7151806169405301 0.4859439141710221 0.8529102938235036 0.8914524226987596 0.6252840805982316 0.7531873422801627 0.603448976071951 0.7051469220429172 0.8577311799722392 0.7049904984356483 1.0 10.256346571279531 -9.190387121062559 1.1280358030706912 0.963286330842022 0.7025872555689117 0.08385773208116554 0.13426538901134358 0.2541936035921449 0.673115576573198 0.02686068340273295 0.023399687086232957 6.450789627206588e-10 9.190387121062559 -0.2606990752731103 RWS(ph)GNESTDEFSELSFR ddPTM_A549_MK2206_60min_R1 1 RWSGNESTDEFSELSFR 17 1 O75427 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 RWS(0.438)GNES(0.261)T(0.301)DEFSELSFR 46.353 0.011313 1656600.0 565.57 575.21 492.1 340.26 734.6 638.2 419.35 652.9 1058.9 887.13 572.89 True False 661.0243891410713 604.4857320794449 561.8871796522432 423.6237152748519 626.541313118736 705.7339003971263 495.54046684567817 745.4505744223914 819.060840715832 686.726716861457 430.62560204035805 1.5350327198593279 1.403738489340429 1.3048160095218475 0.9837401986033104 1.454956022470807 1.6388572742848326 1.150745484006862 1.731087447867366 1.9020254179849483 1.5947187385228834 1.0 8.750290284567054 -6.919687072291571 24.999491382880294 1.4555199945903488 1.3018272086175147 0.0909871475606957 0.2687748628412188 96.8213832850714 30131.790781696243 0.05263774029583202 0.0994759752396036 1.2031310296229793e-07 6.919687072291571 -0.1536927859728341 RWS(ph)IVSSPER ddPTM_A549_MK2206_60min_R1 2 RWSIVSSPER 10 1 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 RWS(1)IVSSPER;RWS(1)IVSSPER 99.531 0.00019726 9134900.0 1338.83 1446.04 1068.17 945.9300000000001 2211.41 1395.1399999999999 1472.3 1572.7 2618.1000000000004 1861.6399999999999 2611.8 True False 1564.7917727491572 1519.637259463779 1219.6525679519145 1177.682892464412 1886.1145184371123 1542.7727887810192 1739.7978522401131 1795.6350411917526 2025.1045302465968 1441.0942310348682 1963.217977987061 0.7970545249150476 0.7740542703372669 0.6212517314060338 0.5998737306144278 0.9607259813151239 0.7858387637438329 0.8861969846180675 0.9146386500763733 1.0315230162689268 0.7340469816359669 1.0 10.93900465018244 -7.764533045850615 0.8030527072314323 1.0165966826060377 0.7147645421628329 0.2258084182519774 0.12121747595313577 0.2531853527243731 0.32926681119134404 0.017227211768425645 0.031295560552797135 1.7197564784705612e-08 7.764533045850615 -0.30183214044320483 RWT(ph)LGGMVNR ddPTM_A549_MK2206_60min_R1 2 RWTLGGMVNR 10 1 Q5TCZ1 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 RWT(1)LGGMVNR;RWT(1)LGGMVNR 89.23100000000001 0.00042434 10234600.0 1030.72 1036.49 1071.01 894.45 1870.54 1049.1799999999998 1076.8 1103.3899999999999 1873.19 1907.75 1917.46 True False 1204.6803373154257 1089.242913793265 1222.8953226566734 1113.590290153387 1595.3860438893541 1160.2035312106811 1272.4406216750356 1259.798911490156 1448.9154558697599 1476.7879500100826 1441.3017627961826 0.8358279774655226 0.7557355037713203 0.8484658481817214 0.7726281330517335 1.1069063294519546 0.804969202951532 0.8828412304210675 0.8740701940488133 1.005282511456037 1.0246209281983083 1.0 10.493156706303818 -6.956014719999662 0.29386439423313754 1.0208400122449275 0.734128804991441 0.37580471268381255 0.08694599411587618 2.166547537486511 0.2948233875781465 0.047290659742615516 0.20924018619172474 1.10658627664946e-07 6.956014719999662 -0.28671120725348653 RWT(ph)LGGMVNR ddPTM_A549_PD325901_60min_R1 3 RWTLGGMVNR 10 1 Q5TCZ1 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 RWT(1)LGGMVNR;RWT(1)LGGMVNR;RWT(1)LGGMVNR 101.39 0.00026324 17813700.0 1598.1799999999998 1912.06 1572.37 1657.44 1475.59 1615.43 1888.55 1631.6999999999998 2338.2 1866.99 2365.38 True False 1760.4260570820677 2073.1960065751528 1679.0804836289183 1759.8163044806486 1371.9496489091466 1602.2744736741095 1960.4198037042142 1599.154463456112 2239.9335853095286 1749.1079327774933 2074.453255379233 0.8486217043055243 0.9993939372695818 0.809408686011565 0.8483277701810326 0.6613548149863416 0.772383985765539 0.9450296354572849 0.7708799700881999 1.0797705754522022 0.8431657489711607 1.0 11.018515433319049 -8.764924628683035 24.999999446972303 1.0376694472608494 0.833403340036707 0.21240813194637964 0.10414144387085511 51.595506034542005 370098.1807372743 0.015470476761728845 0.016794097392842194 1.7182065540909782e-09 8.764924628683035 -0.2042661072241424 RWWAAS(ph)PAPAR ddPTM_A549_MK2206_60min_R1 2 RWWAASPAPAR 11 1 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 RWWAAS(1)PAPAR;RWWAAS(1)PAPAR 90.412 0.00012509999999999998 7100300.0 1660.82 1918.0500000000002 2138.1000000000004 1822.94 2612.6 2195.33 2373.3 1971.85 3239.0 2913.7 2764.8 True False 1941.1258128494687 2015.6705523460628 2441.31473036875 2269.5603818348877 2228.290000890293 2427.6383634578874 2804.497889507209 2251.3657760373603 2505.3716716201516 2255.4931463474645 2078.2238554018786 0.9340311477052609 0.9699005942534908 1.1747121100660538 1.0920673323692598 1.0722088455958922 1.1681313142218939 1.3494686254406827 1.0833124498044029 1.205535036616964 1.0852984583373029 1.0 11.021135346836852 -5.677755104014192 6.00398260062088 1.121306315386344 0.9450369267232848 0.3876015532140036 0.08805982322264444 0.193628126628446 10.775398306152134 0.01420685590841778 0.056535007464422034 2.10012379667683e-06 5.677755104014192 -0.1762693886630593 RWWAAS(ph)PAPAR ddPTM_A549_PD325901_60min_R1 2 RWWAASPAPAR 11 1 Q8NC56;H7C2Z0 Q8NC56 LEMD2 LEM domain-containing protein 2 1 RWWAAS(1)PAPAR;RWWAAS(1)PAPAR 83.087 0.00026715 6497200.0 2390.6 2549.3999999999996 2375.1 1936.02 3083.9 2382.26 2161.02 1985.57 3002.2 2419.54 2712.5 True False 2633.2919521332965 2764.2468851200774 2536.2885686365444 2055.6035583795633 2867.297502877437 2362.859664395786 2243.258798655518 1945.9662487004684 2876.027974431728 2266.7698314787194 2378.8796959542105 1.1069462472657898 1.161995240793919 1.0661693287601055 0.8641057224859051 1.2053142106151415 0.9932657243719931 0.9429895939969791 0.818017931722229 1.2089842034984046 0.9528728314146538 1.0 11.216066598695479 -12.792415727035285 0.01273006645205724 1.0581023442132562 1.0675291995007474 0.0 0.13081313862949143 2063255.7669503333 3113.7284367553184 1301.4836819008385 1019.2387887763716 1.6128139565439637e-13 12.792415727035285 0.00942685528749121 RWYVPPDQVKGPTYTK ddPTM_A549_PD325901_60min_R1 1 RWYVPPDQVKGPTYTK 16 2 O95081 O95081 AGFG2 Arf-GAP domain and FG repeat-containing protein 2 0 45.863 0.011814 90597000.0 2616.0 2134.3 2699.3 2833.3 3131.1 3529.0 2195.8 2732.5 2259.5 2200.9 2245.4 False True 2881.574394202586 2314.164951326501 2882.4907302095185 3008.306506108831 2911.1823377086 3500.260994036219 2279.362370587866 2677.998143895219 2164.5410726229074 2061.9347983920557 1969.2300347633484 1.4633000428255596 1.1751623276478236 1.4637653698776338 1.5276562174059838 1.4783353322449453 1.777476948982683 1.1574891355248842 1.3599214396590527 1.099181423404925 1.0470766553384647 1.0 10.943415933549057 -8.616566186961945 1.239870813615641 1.0326091145905143 1.4547584663526445 0.5508278174222396 0.15564025123171926 0.21457695893284626 0.6430163208288431 0.03088756995910029 0.03486719011698907 2.417874823038555e-09 8.616566186961945 0.4221493517621302 RY(ph)PSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVK ddPTM_A549_PD325901_60min_R1 1 RYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVK 44 3 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RY(0.13)PS(0.13)S(0.13)IS(0.13)S(0.13)S(0.13)PQKDLT(0.13)QAKNGFS(0.025)S(0.025)VQAT(0.027)QLQT(0.006)T(0.006)QS(0.001)VEGATGSAVK 46.247 0.0012109000000000002 3271300.0 599.46 831.82 363.18 464.09 770.53 648.8 687.72 882.56 468.56 743.62 730.19 True False 660.3167379008725 901.9203906725445 387.82757877875474 492.75578527513755 716.410630984193 643.5163879089547 713.8915609348237 864.9566484450739 448.8680526612919 696.6677062930165 640.3812590557809 1.031130640635058 1.4084115953086973 0.6056198136569338 0.7694725264160419 1.1187251670052223 1.0048957223666983 1.114791463428257 1.3506901337500434 0.7009387709489371 1.0878952131113706 1.0 9.322787277355765 -8.802944744483808 24.99999860995067 0.858776739075196 1.0411055839309786 0.02596772168063677 0.234405735559972 246.02775940405127 148189.21334695182 0.041438304582311555 0.044113970535452775 1.5741831358770028e-09 8.802944744483808 0.1823288448557826 RY(ph)S(ph)PSPPPK ddPTM_A549_MK2206_60min_R1 1 RYSPSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RY(0.592)S(0.977)PS(0.431)PPPK 53.17 0.011444 17110000.0 3824.0 4671.0 3834.0 3733.6 4850.2 3790.8 3178.2 4340.1 5931.6 5823.2 6260.2 True False 4469.397712176133 4908.733948545901 4377.718851425934 4648.33216760767 4136.7420050210885 4191.939939870615 3755.637800712848 4955.322465998811 4588.102070818804 4507.735075611955 4705.619567269543 0.9498000525294314 1.043164216395465 0.9303172066598077 0.9878257477378023 0.8791067671077056 0.8908369833014373 0.7981176010988227 1.0530648292237867 0.9750261374149019 0.9579471972120323 1.0 12.200168973137758 RY(ph)TVSSK ddPTM_A549_PD325901_60min_R1 1 RYTVSSK 7 1 Q16825;G3V1Q9;G3V3S6 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RY(0.5)T(0.5)VS(0.001)SK 41.979 0.040108 2007300.0 1247.9 1492.6 1467.6 1496.2 1284.4 999.98 1218.4 1509.9 1257.7 1356.4 1539.9 True False 1374.585889344575 1618.386640280156 1567.2001613957273 1588.616875883256 1194.1881749394533 991.8364944223118 1264.766878734063 1479.783860006364 1204.8432427695634 1270.7566725153276 1350.5020622303741 1.017833239791153 1.1983592513789771 1.1604574367013354 1.1763157719727075 0.884254980675286 0.7344205700687929 0.9365160662141322 1.0957286933442212 0.8921446893459363 0.9409513010418171 1.0 10.399280127520639 -6.757785973093468 24.9999286280813 0.9380390482191329 1.144122440985835 0.5428494714379921 0.09311252286120746 60.83015744167627 416248.7305695696 0.01406527228649632 0.02840776845729788 1.7466827325878857e-07 6.757785973093468 0.20608339276670218 RYCPIPDVLCELGR ddPTM_A549_PD325901_60min_R1 1 RYCPIPDVLCELGR 14 1 Q08426-2;Q08426 Q08426-2 EHHADH Peroxisomal bifunctional enzyme;Enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase;3-hydroxyacyl-CoA dehydrogenase 0 26.541 0.05329400000000001 14672000.0 475.13 526.53 293.58 515.01 432.83 266.51 361.18 439.65 226.97 964.44 456.05 False True 523.364847827781 570.9025309571957 313.504104239955 546.820998027427 402.42951398243815 264.339630921109 374.9249025452797 430.88083585124707 217.43124020943628 903.5450938076405 399.9587411391402 1.3085470924754947 1.4274035600051718 0.7838411115782844 1.3671935171863023 1.0061775693069261 0.6609172490348169 0.9374089474265257 1.0773132114178485 0.5436341748405367 2.25909575381254 1.0 8.643707372214651 -6.393064311747927 0.6607885663003843 0.8011855589747843 1.3786981371754872 0.0 0.48967829311642747 0.9319755681240738 0.5838852565289263 0.04340882345176248 0.30647157226594696 4.045159852112788e-07 6.393064311747927 0.5775125782007029 RYDDPEVQK ddPTM_A549_MK2206_60min_R1 2 RYDDPEVQK 9 1 P38646;D6RJI2;A0A3B3ITI4 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 93.111 0.00099592 6581000.0 3162.8 3298.3 3033.1000000000004 2472.7 3974.7000000000003 3198.6 2839.1 3151.3 4862.1 4362.5 4704.700000000001 False True 3696.6033169640923 3466.169381821651 3463.23918838289 3078.5116110037206 3390.0268952532506 3537.0737289411595 3354.9277200943457 3598.0064254514973 3760.84211317825 3377.008220112164 3536.393146885567 1.045303269015669 0.9801425457670732 0.9793139632772159 0.8705230111971306 0.9586114310392162 1.0001924509033142 0.9486862972373322 1.0174226326109108 1.0634683297275223 0.9549300883263586 1.0 11.788062955187014 -8.376270709368317 5.194175696403261 1.0304128510349777 0.9669406415086728 0.08506888450741901 0.04770105269862023 0.21834514950836592 8.596372442997055 0.007523482794599972 0.009113719294576855 4.204644580026579e-09 8.376270709368317 -0.06347220952630495 RYDSNSGGER ddPTM_A549_MK2206_60min_R1 1 RYDSNSGGER 10 1 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 0 44.611999999999995 0.055388 2168900.0 458.77 496.28 504.91 396.35 625.11 372.55 563.43 626.16 623.8 575.59 767.36 False True 536.1991601503777 521.5385322167327 576.5138302747699 493.45576779282766 533.1571470782096 411.9729937213247 665.7979378439495 714.9200975345765 482.51029600390603 445.56381923538396 576.8033339414005 0.9296048212593238 0.9041877907552415 0.9994980894707173 0.8555008939025299 0.924330903975626 0.7142347650909703 1.1542893368774985 1.2394520895872765 0.8365248042288985 0.7724709498309702 1.0 9.171935693200243 -7.756934921952018 24.99982451651217 0.9654118766770275 0.8938904744378906 0.11699269654698452 0.13915925483260602 296.53551933079245 1645768.2379315326 0.021775967996905853 0.031698479055051826 1.750108918848644e-08 7.756934921952018 -0.07152140223913694 RYEDDGIS(ph)DDEIEGK ddPTM_A549_MK2206_60min_R1 4 RYEDDGISDDEIEGK 15 1 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RYEDDGIS(1)DDEIEGK;RYEDDGIS(1)DDEIEGK;RYEDDGIS(1)DDEIEGK;RYEDDGIS(1)DDEIEGK 141.85 1.4814000000000001e-13 55562600.0 6680.3 6537.5 6159.5 5283.87 9463.300000000001 7655.9 7154.0 6785.0 9577.3 9366.099999999999 9170.7 True False 7807.771322345775 6870.230826079811 7033.009719707366 6578.418387201938 8071.261105957704 8466.042256424877 8453.789197124072 7746.794528191035 7408.056841805401 7250.291504961038 6893.362091555993 1.1326506889736556 0.9966444145586786 1.0202582754679945 0.9543120323332724 1.1708743859320223 1.228144139823343 1.2263666241295406 1.1238049627017928 1.0746652712295328 1.0517787124286224 1.0 12.750992083232399 -4.4026239229878845 16.38467369557884 1.067993335087377 1.076298081888946 0.0 0.09235980336822125 0.0 0.0 0.013416322735423066 0.0 3.9570913580391475e-05 4.4026239229878845 0.008304746801569118 RYEDDGIS(ph)DDEIEGK ddPTM_A549_PD325901_60min_R1 2 RYEDDGISDDEIEGK 15 1 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RYEDDGIS(1)DDEIEGK;RYEDDGIS(1)DDEIEGK 145.88 5.1492999999999993e-14 64571000.0 8229.5 8791.0 8567.9 8803.6 9974.0 8002.2 8218.099999999999 8652.9 9861.9 10067.7 9684.1 True False 9064.9527817623 9531.848422017183 9149.36921696815 9347.378377573743 9273.460648432036 7937.0327363209535 8530.844292616866 8480.311121431267 9447.43863868105 9432.02370383557 8493.0170925678 1.0673418742669196 1.1223159353297971 1.07728138507748 1.10059573361198 1.0918923802175318 0.9345362960904217 1.004453917805272 0.9985039508341915 1.1123772077355714 1.1105621949224016 1.0 13.0520614381166 -7.062026178826887 24.999927330611815 1.037293172672161 1.093419248185973 0.28479334303986636 0.04987777730880624 294.1804284071286 118570.13334459614 0.008284472806607235 0.01434914051793059 8.669096177586902e-08 7.062026178826887 0.05612607551381199 RYEDDGIS(ph)DDEIEGKR ddPTM_A549_MK2206_60min_R1 4 RYEDDGISDDEIEGKR 16 2 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RYEDDGIS(1)DDEIEGKR;RYEDDGIS(1)DDEIEGKR;RYEDDGIS(1)DDEIEGKR;RYEDDGIS(1)DDEIEGKR 144.69 5.0433e-15 223829000.0 14235.8 15035.4 13109.400000000001 12059.6 19166.4 16098.3 15172.400000000001 13841.400000000001 22151.6 21662.600000000002 20882.8 True False 16638.45500810591 15800.637638614213 14968.51004457046 15014.202541376017 16347.047949576548 17801.811420813305 17929.028685273315 15803.460837509721 17134.297968836363 16769.003614670903 15697.024424040203 1.059975098377492 1.0066008188415203 0.9535890140838403 0.9564999158937133 1.0414106207633103 1.134088279403426 1.1421928259100347 1.0067806745147514 1.0915634394118006 1.0682918725022146 1.0 13.938203482899597 -6.9271433388554975 7.7019731037500945 1.056405904500749 0.9925593986181425 0.32368830283130257 0.05043619664507543 0.30076438519185345 27.512689779875497 0.008429235864337244 0.015979207189031012 1.182651157392917e-07 6.9271433388554975 -0.06384650588260654 RYEDDGIS(ph)DDEIEGKR ddPTM_A549_PD325901_60min_R1 4 RYEDDGISDDEIEGKR 16 2 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 RYEDDGIS(1)DDEIEGKR;RYEDDGIS(1)DDEIEGKR;RYEDDGIS(1)DDEIEGKR;RYEDDGIS(1)DDEIEGKR 173.36 8.593899999999999e-29 390075000.0 25095.899999999998 24556.2 24270.800000000003 25411.5 28030.100000000002 26973.9 24901.100000000002 26905.9 28832.199999999997 26052.600000000002 29158.0 True False 27643.61729337486 26625.637153991385 25917.962440176798 26981.11064129621 26061.36247459546 26754.233501568044 25848.72498690477 26369.24071722979 27620.482900676314 24407.634389835457 25571.750847790914 1.0810216890472688 1.0412129115629762 1.0135388301898691 1.0551139341961424 1.0191465820904806 1.0462417556316557 1.0108312544089169 1.0311863616295076 1.0801170035278356 0.9544764664381195 1.0 14.64226332201991 -5.277838919330414 4.436730916639459 1.0353347247787668 1.0835850506461684 0.13578669097077833 0.032562204865152246 0.2555904391638532 12.123752405626131 0.003971362945570481 0.03729230551156912 5.274254482752931e-06 5.277838919330414 0.04825032586740163 RYEPSDKDRQS(ph)PPPAK ddPTM_A549_MK2206_60min_R1 6 RYEPSDKDRQSPPPAK 16 3 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RY(0.002)EPS(0.01)DKDRQS(0.987)PPPAK;RYEPSDKDRQS(1)PPPAK;RYEPS(0.002)DKDRQS(0.998)PPPAK;RYEPSDKDRQS(1)PPPAK;RYEPS(0.001)DKDRQS(0.999)PPPAK;RYEPSDKDRQS(1)PPPAK 129.32 1.5047999999999998e-10 359026700.0 16189.63 16749.88 16891.74 14397.55 19795.58 15355.21 14880.03 15443.55 21091.07 24347.74 24878.0 True False 18922.04374554867 17602.37734747806 19287.24273119079 17924.95039633059 16883.676405046255 16980.088130236538 17583.53884077189 17632.720506388312 16313.976320517952 18847.568623760184 18700.106002129596 1.0118682612490968 0.941298265660819 1.0313975080672981 0.9585480635398147 0.902865278042997 0.908020956047138 0.9402908645956044 0.9429208852816273 0.8724002055742407 1.0078856569911312 1.0 14.190758827647027 -6.518139180237478 24.043997992874505 0.9340396957553994 0.9904113337201506 0.23926797409199496 0.04255749686416656 148.29720214166815 752313.5272780803 0.007010595371174294 0.01491975380427923 3.032919055698653e-07 6.518139180237478 0.0563716379647512 RYEPSDKDRQS(ph)PPPAK ddPTM_A549_PD325901_60min_R1 3 RYEPSDKDRQSPPPAK 16 3 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RYEPSDKDRQS(1)PPPAK;RYEPSDKDRQS(1)PPPAK;RYEPSDKDRQS(1)PPPAK 139.0 2.0816999999999996e-11 473870000.0 13335.8 14350.900000000001 14046.499999999998 14095.1 15582.8 14979.8 14537.3 14749.900000000001 15174.5 14876.099999999999 16353.099999999999 True False 14689.640598702925 15560.300707487928 14999.779958466264 14965.722314705325 14488.317885741602 14857.809475336859 15090.524906615794 14455.701673427293 14536.768535745205 13936.820507228891 14341.77237084195 1.0242555953940686 1.084963580869778 1.0458804930527346 1.043505776533723 1.010218089585468 1.0359814039123962 1.0522078106117567 1.0079438788762936 1.0135963784573585 0.9717641688110765 1.0 13.807935704329855 -7.632759520493629 0.3092012898575216 0.9983764438881926 1.0625774171010711 0.5147566512934847 0.020268465978143312 1.1376954446205896 0.23789889283541152 0.010614259215845183 0.02589643697341892 2.3293807358693096e-08 7.632759520493629 0.06420097321287854 RYFS(ph)PGESR ddPTM_A549_MK2206_60min_R1 2 RYFSPGESR 9 1 O95425-4;O95425;A0A6I8PIX7;O95425-3 O95425-4;O95425-3 SVIL Supervillin 1 RYFS(1)PGESR;RYFS(1)PGESR 120.03 6.0566e-05 19323200.0 2277.72 2911.6 2033.32 2267.62 3633.2000000000003 3077.6 2455.8999999999996 2554.9 3861.5 3861.2 3886.2000000000003 True False 2662.143451092528 3059.788003550895 2321.675350803696 2823.18700179733 3098.761092870939 3403.2695892544557 2902.1052403154877 2917.0648990530995 2986.8764155483846 2988.952238280134 2921.1492863363633 0.9113342695440689 1.0474603327748475 0.7947814792154928 0.9664644717073344 1.060802029997355 1.1650447326239723 0.9934806323969974 0.9986017875558882 1.0225004348526312 1.0232110533552388 1.0 11.5123203741382 -6.528305986088737 20.06875078394443 1.023022126831752 0.9224529853513294 0.348047465261478 0.07112575094097136 11.721381170362537 43343.621098370946 0.009864277008367886 0.0206412450353122 2.962743226569221e-07 6.528305986088737 -0.10056914148042273 RYFS(ph)PGESR ddPTM_A549_PD325901_60min_R1 1 RYFSPGESR 9 1 O95425-4;O95425;A0A6I8PIX7;O95425-3 O95425-4;O95425-3 SVIL Supervillin 1 RYFS(0.956)PGES(0.044)R 88.803 0.00046352 17858000.0 1521.0 1187.4 1145.3 1111.5 1781.6 1565.9 1344.3 1258.5 1513.4 1312.8 1369.7 True False 1675.410800298981 1287.4663651806623 1223.0269452483835 1180.1548306003474 1656.466562186337 1553.1478295724899 1395.4580721291857 1233.3982302258496 1449.7970609902663 1229.90958395615 1201.2355832436795 1.394739569547959 1.0717850712548282 1.0181407896241812 0.982450775736756 1.3789689427226286 1.292958559701126 1.1616855940622821 1.0267746372408664 1.2069215074993032 1.0238704223488306 1.0 10.23030340110739 -10.912004994277309 0.8425580949611499 0.984862553468798 1.1669050283278555 0.17025570378287613 0.13470164160092943 1.1559123961933913 1.2436663670200088 0.14606753719544302 0.024811368928785563 1.2246021165677441e-11 10.912004994277309 0.18204247485905745 RYGLLANTEDPTEMASLDS(ph)DEETVFESR ddPTM_A549_PD325901_60min_R1 2 RYGLLANTEDPTEMASLDSDEETVFESR 28 1 Q9BVV8 Q9BVV8 C19orf24 Uncharacterized membrane protein C19orf24 1 RYGLLANTEDPTEMAS(0.009)LDS(0.94)DEET(0.05)VFES(0.001)R;RYGLLANTEDPTEMAS(0.043)LDS(0.904)DEET(0.049)VFES(0.003)R 69.094 0.00012076 3573500.0 950.49 757.74 697.5 604.1800000000001 583.94 587.24 924.97 787.3499999999999 713.56 1019.34 570.2 True False 1046.9830450862446 821.5974090887615 744.8365444082318 641.4988264076638 542.926068883638 582.4577121388013 960.1702395130053 771.6456865858737 683.5715546717424 954.9786984383476 500.0690147956095 2.093677100778124 1.64296803997058 1.4894674982265494 1.282820585614288 1.085702278725558 1.1647546536688862 1.9200754517962895 1.5430783826933654 1.3669544291824098 1.9096938026217658 1.0 8.965983405526865 -2.000000000000815 0.043933244792738316 8.063639039627828e-17 3.9664501678523196 0.0 0.37233821749757956 433.5662832090101 1.4061984481656093 32.36863392186154 121.5997709039833 0.009999999999981236 2.000000000000815 3.9664501678523196 RYLS(ph)PER ddPTM_A549_MK2206_60min_R1 2 RYLSPER 7 1 K7ESL7;C9JRL6;O95834-2;O95834-3 K7ESL7 EML2 1 RYLS(1)PER;RY(0.001)LS(0.999)PER 83.309 0.006093100000000001 20016500.0 2060.9 2370.3 2310.06 1761.74 3525.8 2361.7 2197.3 2248.6499999999996 3378.3999999999996 2972.9 3446.8999999999996 True False 2408.7295358325828 2490.93814563013 2637.6612441118887 2193.366379087515 3007.159490599018 2611.613526430417 2596.5209676881095 2567.4030237018087 2613.197794196208 2301.31982523128 2590.9396003995707 0.929674136541474 0.9614034017797949 1.0180327027712697 0.8465524934464922 1.1606443817274856 1.0079793160858161 1.0021541865691033 0.9909158142111332 1.008590780654711 0.8882182451788432 1.0 11.339259668678867 -6.72871793925107 24.999998137672108 1.012322566053619 0.9461733157818223 0.18196239323502617 0.06989594844353353 216.00366516435716 165031.2328854824 0.00778473991623424 0.016204417421916723 1.867592240068172e-07 6.72871793925107 -0.06614925027179674 RYLS(ph)PER ddPTM_A549_PD325901_60min_R1 2 RYLSPER 7 1 K7ESL7;C9JRL6;O95834-2;O95834-3 K7ESL7 EML2 1 RYLS(1)PER;RYLS(1)PER 86.898 0.005428499999999999 23616000.0 4726.1 4252.6 4178.2 4336.7 5047.2 4895.8 4945.0 4858.8 5171.0 4789.6 6112.0 True False 5205.890192829068 4610.981526501001 4461.757777557666 4604.5681096396975 4692.702083894747 4855.930227997316 5133.1846810078305 4761.887422345138 4953.68085263689 4487.183838601751 5360.262747160231 0.9712005620595844 0.8602155797201947 0.8323766927136964 0.8590191053748463 0.8754612050278422 0.9059127242540301 0.9576367657960979 0.8883682847203522 0.9241488871532015 0.8371201282957591 1.0 12.388088004512023 -9.922723414386796 0.32906681239493957 1.0220264915151607 0.8747320958106477 0.0 0.061485443637523486 1.1405840795072537 0.24063896024407994 0.06280104052177259 0.01982890501902528 1.1947487521969538e-10 9.922723414386796 -0.14729439570451297 RYPS(ph)SISS(ph)SPQK ddPTM_A549_MK2206_60min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.69)S(0.309)IS(0.002)S(0.954)S(0.044)PQK 100.22 0.00040385 12596000.0 3515.7 4125.8 3582.5 2833.1 4961.3 4116.5 3770.6 4311.8 5362.8 5133.2 6054.1 True False 4109.064209387457 4335.785597283382 4090.5523696487744 3527.2096271826895 4231.499342194367 4552.105297688449 4455.669212563045 4923.010854333693 4148.134362631846 3973.6065548377705 4550.699885340173 0.9029521420704053 0.9527733549845541 0.8988842315939712 0.775091681731287 0.9298568239636957 1.000308834329595 0.9791173500403172 1.0818140018841715 0.9115376683034692 0.8731858076685135 1.0 12.151872729634803 -6.998428678827415 24.99981797991039 0.9716499147805111 0.8841068962220406 0.3139303504006107 0.06345974008310983 50.433708253987405 802373.6068450124 0.008886717589059213 0.0167091747678546 1.003624653935696e-07 6.998428678827415 -0.08754301855847046 RYPSS(ph)ISS(ph)SPQK ddPTM_A549_PD325901_60min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.395)S(0.442)IS(0.163)S(0.61)S(0.389)PQK 61.641000000000005 0.0019929 41406000.0 5621.7 3699.5 5515.1 5019.8 5286.5 6419.0 5433.4 5584.7 4829.2 4656.9 4972.3 True False 6192.41084552319 4011.269848396381 5889.387850990446 5329.861645207037 4915.194477434928 6366.725792212663 5640.171010270561 5473.308777387602 4626.245517995374 4362.862539248474 4360.738622006678 1.4200371501912288 0.9198601879400232 1.3505482353997018 1.2222382736515398 1.1271472343309368 1.4600108706544972 1.293398091279116 1.2551334193171508 1.060885762482714 1.00048705447079 1.0 12.090356804080532 -8.818727883244035 3.871210109979451 1.025980981259018 1.251307528895071 0.365247921484364 0.13865136275284287 0.17280766699127117 5.107157865516801 0.02320758884692811 0.02480501269941333 1.5180012065741611e-09 8.818727883244035 0.2253265476360531 RYPSS(ph)ISS(ph)SPQKDLTQAK ddPTM_A549_MK2206_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.183)S(0.812)IS(0.007)S(0.887)S(0.11)PQKDLTQAK 123.36 5.5690000000000004e-11 121940000.0 4404.7 4571.2 4197.4 3991.4 6744.8 4617.8 4332.8 4122.2 7541.6 5890.6 6517.4 True False 5148.105675424221 4803.854554826163 4792.654435830779 4969.293179180753 5752.648854782531 5106.452530952442 5120.013675328375 4706.534473708042 5833.439641460495 4559.909368800626 4898.949708910664 1.050859057822204 0.9805886649720993 0.978302436359666 1.0143588880167806 1.1742616676221598 1.04235659363156 1.0451247674609965 0.9607231658547873 1.1907531181326672 0.930793259728027 1.0 12.258256766101672 -6.549713492195018 24.913674153388975 1.08032926489012 1.0002083121649779 0.0 0.07991343418783857 280.43784034679027 260360.66133029395 0.011687696567118806 0.024330371939816287 2.8202428561612664e-07 6.549713492195018 -0.08012095272514208 RYPSS(ph)ISS(ph)SPQKDLTQAK ddPTM_A549_PD325901_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RY(0.007)PS(0.405)S(0.584)IS(0.083)S(0.417)S(0.32)PQKDLT(0.185)QAK 75.112 0.00041609 118570000.0 3864.7 3516.4 3646.4 4289.6 3995.2 3725.8 3932.5 3975.1 4496.8 3687.4 4392.3 True False 4257.041498958229 3812.7393688068746 3893.8666315844807 4554.558849611562 3714.5909346917692 3695.458320085053 4082.15343944657 3895.8135120943766 4307.815134043233 3454.576934704381 3852.0749450837548 1.1051294587067462 0.9897884706716097 1.010849136399608 1.182365066760801 0.9643091029245289 0.9593422694959284 1.0597284574269394 1.0113545472593786 1.118310312093258 0.896809377790875 1.0 11.911420056859258 -11.31827888505883 1.916652944710712 0.9997458062452685 1.0546961080897679 0.12397004806851364 0.07344235733895207 0.7806127537722825 5.179807812281986 0.05220187347656268 0.010155032628533416 4.805306734180807e-12 11.31827888505883 0.05495030184449934 RYPSS(ph)ISSS(ph)PQK ddPTM_A549_PD325901_60min_R1 3 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.242)S(0.757)IS(0.003)S(0.05)S(0.948)PQK;RYPS(0.035)S(0.963)IS(0.014)S(0.331)S(0.657)PQK;RY(0.002)PS(0.458)S(0.519)IS(0.041)S(0.185)S(0.796)PQK 119.17 2.9437e-05 66965000.0 12623.199999999999 12741.3 14635.900000000001 12362.3 13082.7 13461.599999999999 13089.0 13654.5 14643.4 12825.1 13887.800000000001 True False 13904.697971291316 13815.054066596245 15629.18018681639 13125.891194179649 12163.816284864828 13351.973192779247 13587.109057575619 13382.150285751972 14027.988821795216 12015.320997254745 12179.688642017656 1.141630002208981 1.134269887568134 1.2832167263207888 1.0776869245160972 0.9986968174951475 1.0962491394662937 1.115554712187192 1.0987267966429 1.151752662494283 0.9865047744984323 1.0 13.572189632632893 -10.857658945732767 0.9265846293049532 0.9942499101282256 1.1227313491660391 0.3665148483060712 0.0648522116504327 0.6453309836598858 0.9086196589685083 0.05919023075983572 0.01203130648210669 1.387845284921328e-11 10.857658945732767 0.1284814390378135 RYPSS(ph)ISSS(ph)PQKDLTQAK ddPTM_A549_MK2206_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.167)S(0.832)IS(0.002)S(0.239)S(0.755)PQKDLT(0.004)QAK 122.34 7.0691e-11 116110000.0 5208.5 5131.8 4438.5 3316.3 7625.6 5732.7 6067.5 4714.9 6903.0 7115.1 7418.5 True False 6087.567464400998 5392.9867003099625 5067.946041224308 4128.7936488743635 6503.884341571238 6339.330508941722 7169.886211007876 5383.251513775672 5339.4815218258445 5507.793968348441 5576.281709815842 1.0916893695820904 0.9671295284125929 0.9088396721964891 0.7404205640483537 1.1663478783940473 1.1368382802078842 1.285782638704719 0.9653837079822596 0.9575343929319134 0.9877180269879761 1.0 12.445087731644616 -5.247080217079132 21.92282665058974 0.9992415425522877 1.0916897376730854 0.02025653281534201 0.13756795983437298 1415.3253933718686 2160626.419936204 0.01907035452091584 0.4735394783292536 5.661347105341996e-06 5.247080217079132 0.09244819512079772 RYPSS(ph)ISSS(ph)PQKDLTQAK ddPTM_A549_PD325901_60min_R1 3 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.073)S(0.927)ISS(0.015)S(0.985)PQKDLTQAK;RY(0.033)PS(0.397)S(0.443)IS(0.135)S(0.279)S(0.475)PQKDLT(0.238)QAK;RYPS(0.132)S(0.865)IS(0.003)S(0.306)S(0.694)PQKDLTQAK 202.43 2.4580999999999998e-49 484900000.0 15144.7 15478.5 18570.7 17533.0 17636.4 17403.2 16771.5 17221.0 18177.199999999997 18171.9 19474.3 True False 16682.178795061118 16782.927516800482 19831.01937669095 18615.97358966792 16397.68010627701 17261.474109212566 17409.748610216942 16877.513645386854 17413.275496915725 17024.523132764152 17079.08455775893 0.9767607121239117 0.9826596653961815 1.1611289416376729 1.089986616478855 0.9601029874184701 1.0106791175391643 1.019360759725719 0.9881977917674455 1.0195672629892198 0.9968053659544654 1.0 14.059943027846508 -6.753463269954795 24.99832957326859 1.0058744296635198 1.0553854502521833 0.2053674266749752 0.049328702704277284 246.7621555729016 773382.9517410405 0.0070743963553678586 0.014522554437119424 1.764154959905113e-07 6.753463269954795 0.049511020588663524 RYPSSIS(ph)SS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.054)S(0.061)IS(0.882)S(0.186)S(0.817)PQK 61.732 0.0019802 32915000.0 8065.2 9005.9 9824.6 9321.9 11886.0 10932.0 9873.2 9160.0 14550.0 14571.0 14630.0 True False 9426.408584791574 9464.261842690967 11217.876011403026 11605.765918475998 10137.585145288987 12088.816983925704 11667.032639229154 10458.458051323498 11254.448231575552 11279.400980001004 10996.967232541041 0.8571825654711384 0.8606247197577658 1.020088154687621 1.0553605983414651 0.9218528100448401 1.0992864421886954 1.060931836252574 0.9510311188684781 1.023413818882046 1.0256828761500913 1.0 13.424818088586594 -5.759668446663554 24.963268404180447 1.0139260782155304 0.8589035752563347 0.6299768313220788 0.04681888404932998 19.14113913384076 269791.0130516746 0.005939161460994391 0.020854245812146233 1.7391280241822237e-06 5.759668446663554 -0.15502250295919573 RYPSSISS(ph)SPQK ddPTM_A549_MK2206_60min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSISS(0.5)S(0.5)PQK 122.39 8.6091e-06 15023000.0 1254.6 1524.1 1378.6 1298.1 1937.4 1702.8 1405.9 1459.8 1928.1 2708.9 2049.1 True False 1466.3458079749425 1601.6701800425615 1574.1062098528396 1616.1345582739239 1652.411026458261 1882.989165772839 1661.3338317356347 1666.7311204500043 1491.3884285430127 2096.957608587243 1540.251917717009 0.9520168688693396 1.0398754655774671 1.021979711076101 1.049266382780675 1.072818678198756 1.2225202540658684 1.0786117599503435 1.0821159196610286 0.9682756511373654 1.3614380767630492 1.0 10.58895061656795 -8.760302375092405 24.995394421585175 0.985019054822733 1.0680895832614814 0.0 0.12902573784920357 30.580980986778705 672277.0652543417 0.011003294881868856 0.012139376441906463 1.7365913157955003e-09 8.760302375092405 0.0830705284387484 RYPSSISS(ph)SPQK ddPTM_A549_PD325901_60min_R1 2 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSISS(0.666)S(0.334)PQK;RYPSSIS(0.002)S(0.986)S(0.012)PQK 183.96 2.7171e-19 39897000.0 9312.6 8725.5 7768.6 8295.7 10253.5 8298.0 8072.400000000001 8053.9 8718.4 10322.099999999999 9562.3 True False 10258.008296426222 9460.828507144914 8295.82391238679 8808.106548098338 9533.32953265469 8230.423839193134 8379.599599386771 7893.258646337676 8351.995967052686 9670.360844419387 8386.197720413991 1.2232013408717757 1.1281427915913569 0.9892235061657072 1.050309907034188 1.1367880713625806 0.9814249691678903 0.9992132166153013 0.9412201941201094 0.9959216614607058 1.1531281716479733 1.0 13.033801129501537 -2.000000000637955 0.49983168155880914 0.9959345573433821 8.200839841191668 0.4008778334258346 0.06694811702286799 40.64970124864107 0.3864800288513915 0.008737920842234539 309.60397779174224 0.009999999985310542 2.000000000637955 7.204905283848285 RYPSSISS(ph)SPQKDLTQAK ddPTM_A549_MK2206_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.003)S(0.003)IS(0.011)S(0.84)S(0.143)PQKDLTQAK 129.32 5.979300000000001e-13 135450000.0 1549.7 2125.1 2046.8 1787.0 2973.5 1999.3 2054.6 1848.9 3199.7 2781.6 2763.7 True False 1811.2514734726353 2233.258512964008 2337.067017500938 2224.8150802214786 2536.1020889716306 2210.8645989720694 2427.8942248268268 2110.9872370187763 2474.97305887095 2153.2346280949005 2077.3970157603344 0.8718850849074273 1.0750273038909839 1.1249977735457388 1.070962874858655 1.220807611511567 1.0642475088772982 1.1687194149252251 1.0161693797591924 1.1913818302877948 1.0365060755162436 1.0 11.020561243710898 -5.265644537375308 3.888461381858925 1.0997821077794148 0.8508939427139324 0.47467661687125695 0.06841886785852723 0.1808481172632694 5.444020704179415 0.010577187617756632 0.12666198138737386 5.424446904809009e-06 5.265644537375308 -0.2488881650654824 RYPSSISS(ph)SPQKDLTQAK ddPTM_A549_PD325901_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RY(0.001)PS(0.001)S(0.001)IS(0.019)S(0.489)S(0.489)PQKDLT(0.001)QAK 54.223 0.0024504 5104500.0 1057.0 1951.0 1472.0 3120.8 1917.5 1618.4 1364.5 1345.7 3983.9 2275.8 1802.2 True False 1164.3058618777259 2115.417617035096 1571.8987718550768 3313.564728148955 1782.8214150158842 1605.2202869788093 1416.4267941830506 1318.8589578187725 3816.470537385438 2132.1055996095415 1580.5408250870696 0.7366502929866339 1.3384137780297836 0.994532217646756 2.096475254263942 1.1279818823519925 1.0156145678112303 0.8961659020133326 0.8344352369045062 2.4146611569968113 1.3489721782365773 1.0 10.626202584940872 RYPSSISSS(ph)PQK ddPTM_A549_MK2206_60min_R1 3 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSIS(0.001)S(0.127)S(0.872)PQK;RYPSSISS(0.068)S(0.932)PQK;RYPSSIS(0.001)S(0.132)S(0.867)PQK 113.99 2.3793e-05 422348900.0 16966.399999999998 19316.2 18059.5 15999.63 23011.7 18905.1 18020.6 18335.1 25370.5 25182.4 25891.9 True False 19829.913531345486 20299.312073839075 20620.6086586663 19919.540068250688 19626.709413414665 20905.625133810245 21294.709757575343 20934.15657388879 19624.122258363423 19493.678350063627 19462.226649913155 1.0188923337522622 1.0430107735863643 1.0595195004965332 1.0234974870328917 1.0084513846467944 1.074164097965817 1.0941558815763954 1.0756300885018315 1.0083184525266533 1.0016160381191848 1.0 14.248389156113408 -8.864206144142754 7.47801692381707 1.0036842784984 1.0497717389708252 0.4105652518175864 0.024772480222752042 0.17477782711359835 11.372075028468702 0.004644106293646241 0.004933038667285784 1.3670797674268973e-09 8.864206144142754 0.04608746047242529 RYPSSISSS(ph)PQK ddPTM_A549_PD325901_60min_R1 3 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSISS(0.019)S(0.981)PQK;RYPSSISS(0.146)S(0.854)PQK;RYPSSIS(0.001)S(0.046)S(0.954)PQK 125.47 1.5885e-06 503654000.0 23284.0 23819.2 22569.9 24066.1 29535.2 25693.600000000002 24473.4 25000.7 25104.4 26162.2 28239.6 True False 25647.77453922515 25826.527577489673 24101.62913783418 25552.60833892131 27460.74944290856 25484.359840285935 25404.74862935835 24502.041425830266 24049.349370902622 24510.314227131006 24766.308225573634 1.0355913487639354 1.0428089379434138 0.9731619633541867 1.031748781699153 1.1087946250524594 1.028993082383221 1.0257785858905473 0.9893295844767657 0.9710510404642917 0.9896636189733644 1.0 14.596091209716143 -8.186532373891577 3.011979943712911 0.9859687017454791 1.0367836939035302 0.376457867409431 0.02983462991123779 0.22234608261604896 3.9612822381391672 0.005201709885031347 0.006769085674341064 6.508300937878046e-09 8.186532373891577 0.050814992158051075 RYPSSISSS(ph)PQKDLTQAK ddPTM_A549_MK2206_60min_R1 3 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.002)S(0.002)IS(0.002)S(0.016)S(0.978)PQKDLTQAK;RYPSSISS(0.03)S(0.97)PQKDLTQAK;RYPS(0.008)S(0.008)IS(0.03)S(0.049)S(0.905)PQKDLTQAK 158.52 2.3618e-23 1566080000.0 5089.8 6190.3 6640.700000000001 6147.1 8199.0 6618.500000000001 6058.8 6347.5 9732.8 9785.1 9890.4 True False 5948.833806337367 6505.359829090916 7582.45111545753 7653.139775953808 6992.937961149625 7318.865276995265 7159.6055336225 7247.277563403476 7528.336340087876 7574.63911395291 7434.340718846473 0.8001831004673673 0.8750419270668429 1.0199224655167591 1.0294308621815875 0.9406265095467219 0.9844672922296296 0.9630451178370796 0.9748379631069665 1.0126434373666948 1.0188716660175088 1.0 12.859989093675038 -5.602149446379138 3.5749533321822007 0.9975733153697434 0.8118888435615907 0.8427040012200324 0.02671080534569636 0.059076684948608585 1.4308326291477544 0.0037951651522503678 0.0188139886268962 2.4994851083616366e-06 5.602149446379138 -0.18568447180815262 RYPSSISSS(ph)PQKDLTQAK ddPTM_A549_PD325901_60min_R1 9 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSIS(0.007)S(0.208)S(0.785)PQKDLTQAK;RYPS(0.019)S(0.019)IS(0.1)S(0.1)S(0.764)PQKDLTQAK;RYPSSISS(0.07)S(0.93)PQKDLTQAK;RYPSSISS(0.025)S(0.975)PQKDLTQAK;RYPS(0.252)S(0.18)IS(0.095)S(0.095)S(0.377)PQKDLTQAK;RYPSSISS(0.029)S(0.971)PQKDLTQAK;RYPS(0.001)S(0.001)IS(0.024)S(0.139)S(0.834)PQKDLTQAK;RYPSSISS(0.016)S(0.984)PQKDLTQAK;RYPS(0.008)S(0.012)IS(0.01)S(0.043)S(0.928)PQKDLTQAK 258.03 1.3064999999999997e-87 2761838900.0 29820.55 31317.499999999996 31554.300000000003 34302.2 36724.8 38403.7 33926.0 36488.2 36385.700000000004 34874.399999999994 35921.600000000006 True False 32847.91028327138 33956.73563377582 33695.764549420295 36420.96898805148 34145.37674168209 38090.95299990617 35217.072495019536 35760.41422656087 34856.53556368014 32672.424432297674 31503.470925783866 1.0426759121448794 1.0778728386396335 1.0695889550964417 1.1560938499079132 1.0838607854392315 1.2091033743437716 1.1178791244299462 1.135126167869107 1.1064347685940845 1.0371055465370034 1.0 14.943223167258928 -10.412673612910616 0.8095447321327339 1.0012760105653384 1.1128034948449717 0.3821806263738895 0.04445505177347454 0.4263819274918578 0.5145342328008125 0.027454459154754418 0.008559006459579407 3.866574541298262e-11 10.412673612910616 0.11152748427963322 RYPSSISSSPQKDLTQAK ddPTM_A549_MK2206_60min_R1 2 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 0 ; 124.26 4.4804e-11 11803300.0 3845.7 3567.1000000000004 3898.8 3295.2 4700.7 3868.8 3525.8999999999996 3208.8 5508.5 5291.9 5430.0 False True 4494.76014166207 3748.650153684025 4451.708465816228 4102.524147927149 4009.233256979636 4278.193848098406 4166.51039001115 3663.6572265378604 4260.83354526694 4096.456114615829 4081.581139623913 1.1012301331038168 0.918430878977806 1.0906823394000738 1.0051311017928621 0.9822745450428695 1.0481707215289147 1.0208079289574195 0.8976073490175523 1.0439173936548383 1.003644414868422 1.0 11.994912422252469 RYPSSISSSPQKDLTQAK ddPTM_A549_PD325901_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 0 77.468 0.00013429 3880500.0 1793.6 1950.3 2253.8 1985.7 2133.6 2274.7 2383.1 2350.7 2508.5 2635.2 2577.1 False True 1975.6849516214663 2114.6586255784464 2406.7564212003917 2108.3521791480975 1983.7432965204127 2256.1755973743802 2473.790174582357 2303.8134444115244 2403.076468543731 2468.8130222739555 2260.133037582894 0.8741454236403573 0.9356345800953269 1.0648737844982368 0.932844281327298 0.877710853092937 0.9982490233350396 1.094532991397692 1.0193264759650364 1.0632455827085774 1.0923308412473962 1.0 11.14219198075925 -7.515607333735819 24.716845183891937 1.0346110319218722 0.9432469598356785 0.49146787420975113 0.05494042096243485 232.5348674481976 790428.6960249027 0.00825226123987569 0.012525789124301806 3.05065198239797e-08 7.515607333735819 -0.09136407208619368 RYPT(ph)PYPDELK ddPTM_A549_MK2206_60min_R1 4 RYPTPYPDELK 11 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 RY(0.004)PT(0.995)PYPDELK;RY(0.001)PT(0.999)PY(0.001)PDELK;RYPT(1)PYPDELK;RY(0.001)PT(0.999)PYPDELK 144.4 1.4948e-11 264236100.0 12496.119999999999 13718.599999999999 13073.82 12370.59 19249.260000000002 14854.0 13360.0 14270.68 20843.3 18625.2 21321.9 True False 14605.159555198345 14416.81814312176 14927.884265558008 15401.385105336883 16417.719353340526 16425.840420712808 15787.339065358918 16293.592592124583 16122.325829910562 14417.754384236814 16027.083775496714 0.9112799159088253 0.8995284697496349 0.9314161250208702 0.9609599176665913 1.024373465773046 1.024880174759287 0.9850412767852169 1.016628653119997 1.0059425692002346 0.8995868859361457 1.0 13.968224321862213 -6.3696507601453725 2.1349746244594736 1.005406034206682 0.9079657398920119 0.4870410068223482 0.03447947871553079 0.06343971007305912 0.5581965679631602 0.001837686942131732 0.005341385288399581 4.2692269259793494e-07 6.3696507601453725 -0.09744029431467005 RYPT(ph)PYPDELK ddPTM_A549_PD325901_60min_R1 4 RYPTPYPDELK 11 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 RYPT(1)PYPDELK;RYPT(1)PYPDELK;RYPT(1)PYPDELK;RYPT(1)PYPDELK 128.54 3.4211e-07 375609100.0 17615.399999999998 17682.2 18648.5 18126.5 19258.8 18679.800000000003 19159.600000000002 20165.699999999997 19777.100000000002 20762.8 23813.0 True False 19403.702440227917 19172.341049686296 19914.09935254036 19246.132736731623 17906.128327253155 18527.677902067964 19888.72906253541 19763.479293814395 18945.93726371786 19451.833264598386 20884.15196304429 0.9291113412009205 0.9180330177453631 0.9535507780148079 0.9215663997651791 0.8574027022470954 0.887164484095584 0.9523359673751495 0.9463386078011217 0.9071920802551039 0.9314159990321621 1.0 14.350120941122912 -10.88580546000439 0.6747676691650104 1.0129318554552513 0.9174163632860803 0.09874222281510503 0.03387078777721589 0.6941782134307689 0.4325668396497195 0.04019225699452292 0.005771118600228927 1.3007521128189537e-11 10.88580546000439 -0.09551549216917099 RYRDFS(ph)LRMEK ddPTM_A549_MK2206_60min_R1 1 RYRDFSLRMEK 11 3 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;F5H228 E7EPJ7 TRIO Triple functional domain protein 1 RY(0.026)RDFS(0.974)LRMEK 40.066 0.031899000000000004 24664000.0 2365.5 2197.7 2064.3 1636.5 3000.6 2484.2 2044.5 2449.4 4293.1 4135.5 3803.0 True False 2764.738569077576 2309.5535428643366 2357.048780646466 2037.4425734652757 2559.2157148707834 2747.0763951215 2415.959185563346 2796.6099509728992 3320.719704671958 3201.2876777705133 2858.610142539549 0.9671618133354207 0.8079288282425814 0.824543628937277 0.712738873743462 0.8952657365852666 0.9609832254639088 0.8451516873920562 0.9783110712985963 1.1616553286702738 1.1198755752424967 1.0 11.481098163191337 -8.455893066945418 3.667002782593347 1.0764262847051123 0.8560035522081008 0.6421979645092637 0.07667671938928257 0.12843053299890914 3.3870664938909116 0.014818954508860656 0.017764105210729773 3.5003134199601934e-09 8.455893066945418 -0.2204227324970115 RYRDFS(ph)LRMEK ddPTM_A549_PD325901_60min_R1 1 RYRDFSLRMEK 11 3 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;F5H228 E7EPJ7 TRIO Triple functional domain protein 1 RY(0.008)RDFS(0.992)LRMEK 42.788999999999994 0.022752 51151000.0 3180.7 3535.4 3827.5 4124.4 4697.3 4725.0 3944.6 3912.6 5551.2 4383.8 4709.4 True False 3503.6023224924174 3833.3405654873795 4087.257166627248 4379.154820807981 4367.377852805276 4686.521166568757 4094.7139115679447 3834.5601236246766 5317.902368818001 4107.00611985601 4130.1736553462715 0.8482941916878498 0.9281306030620144 0.9896090352851216 1.0602834617230725 1.0574320155163348 1.134703176584918 0.9914144666211732 0.9284258831734737 1.287573553217135 0.994390663099535 1.0 12.011986726461759 -4.923274547112725 0.5001915026814424 1.1157039123399015 0.5562311730758296 0.22803561126283423 0.09801100273273827 4.86381542483606 0.6367635848315261 0.023478897552456385 1.7165104317260333 1.1932335418162263e-05 4.923274547112725 -0.5594727392640719 RYRS(ph)PEPDPYLSYR ddPTM_A549_MK2206_60min_R1 1 RYRSPEPDPYLSYR 14 2 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 RY(0.003)RS(0.997)PEPDPYLSYR 82.12100000000001 8.229799999999999e-05 8313100.0 1062.7 1349.0 914.31 1060.0 1655.6 1542.7 1176.9 1398.5 1599.0 1482.3 1967.4 True False 1242.0577794794924 1417.6583379551319 1043.9729063764325 1319.700047585209 1412.0634331600575 1705.947490038619 1390.7274959596475 1596.7416577266272 1236.8290530783036 1147.4474004979402 1478.8402825222993 0.8398863583571362 0.9586284297971543 0.705940268678535 0.8923884906180254 0.9548451241479927 1.1535711531531772 0.9404176450939197 1.0797255637391998 0.8363506645685745 0.7759102954247785 1.0 10.5302505317876 -6.576521669361235 5.03531993002488 0.9536399934031629 0.8399722894797345 0.20277159907096143 0.11110477278694092 0.2572587107621441 13.869249370356584 0.015363258312548296 0.0329259695503612 2.6514187957145124e-07 6.576521669361235 -0.1136677039234284 RYRS(ph)PEPDPYLSYR ddPTM_A549_PD325901_60min_R1 4 RYRSPEPDPYLSYR 14 2 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 RYRS(1)PEPDPYLSYR;RY(0.001)RS(0.999)PEPDPYLSYR;RYRS(1)PEPDPYLSYR;RYRS(1)PEPDPYLSYR 132.4 1.6045999999999998e-09 65180700.0 7506.959999999999 8071.029999999999 8779.88 8194.16 8092.31 7207.320000000001 8724.98 8179.219999999999 7988.289999999999 8532.949999999999 9884.18 True False 8269.061052868132 8751.204023382252 9375.735454507445 8700.29465291241 7523.934062553949 7148.625975499333 9057.013888392248 8016.079040626042 7652.569951326767 7994.178080757638 8668.488520979421 0.9539219014774494 1.0095420905504626 1.0815882644149957 1.0036691669898403 0.8679637798844136 0.8246681019647513 1.0448204282064308 0.924737804200303 0.8828032629686324 0.9222113014754739 1.0 13.08156474484662 -6.552328320505381 21.743147778565987 0.9359793272723298 1.0191630214604255 0.29842509606227163 0.06349719861722418 54.1767735649411 39999.32213210212 0.009989194874142139 0.020794917753730408 2.803313571145349e-07 6.552328320505381 0.08318369418809568 RYS(ph)DFEWLR ddPTM_A549_MK2206_60min_R1 3 RYSDFEWLR 9 1 O60493-4;O60493;O60493-3 O60493-4 SNX3 Sorting nexin-3 1 RY(0.005)S(0.995)DFEWLR;RY(0.012)S(0.988)DFEWLR;RY(0.002)S(0.998)DFEWLR 68.536 0.0018477999999999997 15124800.0 1198.3400000000001 1092.987 828.409 947.76 1711.2599999999998 1038.001 1097.133 1434.26 1728.04 1530.96 1420.77 True False 1400.5904953998834 1148.6153697750665 945.8898528927759 1179.9612425465634 1459.5359208924147 1147.8415768507002 1296.4678645804208 1637.5707472370343 1336.6416991128406 1185.1150727021015 1067.9535977428118 1.3114713020866458 1.0755292853572838 0.8857031381250783 1.1048806287468733 1.366666046143987 1.0748047286668043 1.213973966023045 1.5333725647801035 1.2515915503612876 1.109706522087587 1.0 10.060633248391051 -5.24318085083636 22.634989572723896 1.148013131918284 1.3114717442175476 0.055471010576250035 0.16950353400085075 2485.768998280441 3081406.8597982395 0.025148156173249142 0.9589995998081587 5.712407085436818e-06 5.24318085083636 0.16345861229926362 RYS(ph)DFEWLR ddPTM_A549_PD325901_60min_R1 3 RYSDFEWLR 9 1 O60493-4;O60493;O60493-3 O60493-4 SNX3 Sorting nexin-3 1 RYS(1)DFEWLR;RYS(1)DFEWLR;RYS(1)DFEWLR 79.82 0.00072039 13281200.0 2782.7799999999997 2882.92 2152.65 2738.8 3051.2200000000003 2618.01 2827.0899999999997 2772.35 3455.34 2831.0600000000004 3524.1000000000004 True False 3065.285777025638 3125.873786008621 2298.741773936028 2907.9694557339026 2836.9128333375593 2596.689794558448 2934.6764569930065 2717.0533043834985 3310.1240760685264 2652.3063884482794 3090.6580411105015 0.991790659546487 1.0113942546958272 0.7437709844826668 0.9408900684104938 0.917899293808069 0.8401737623569101 0.9495312706735264 0.8791180610221235 1.0710094847242204 0.8581688278575399 1.0 11.593698323948667 -8.75894796681225 24.99997725835842 1.0335322593460068 0.907578817570043 0.0 0.08858134804144954 48.27202580138329 484383.32923988474 0.01212579101813201 0.013441817377685239 1.7420155732425073e-09 8.75894796681225 -0.1259534417759638 RYS(ph)DHAGPAIPSVVAYPK ddPTM_A549_MK2206_60min_R1 4 RYSDHAGPAIPSVVAYPK 18 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 RY(0.01)S(0.99)DHAGPAIPSVVAYPK;RY(0.009)S(0.991)DHAGPAIPSVVAYPK;RY(0.001)S(0.999)DHAGPAIPSVVAYPK;RYS(1)DHAGPAIPSVVAYPK 114.57 2.4411e-10 41528500.0 7557.8 8946.2 8801.099999999999 8269.5 11973.0 8003.2 8443.6 8794.0 12281.5 12118.8 10987.6 True False 8833.371869530538 9401.523367690284 10049.228321148874 10295.52787123196 10211.78756053719 8850.093311905792 9977.692824271295 10040.5764304955 9499.759859525444 9381.15466312786 8259.07567766698 1.0695351652263567 1.1383263375479835 1.216749756673446 1.2465714412899331 1.236432254537933 1.071559779484399 1.208088315651539 1.2157021950586795 1.1502207063210894 1.135860116707133 1.0 13.011764614749415 -10.281456088860516 0.6724798452674201 0.9969927167560904 1.178312187047738 0.16213156755069813 0.06996644860855876 0.44686989131231647 0.36942961805534746 0.04233570294232295 0.01281436270027464 5.230508487276331e-11 10.281456088860516 0.18131947029164763 RYS(ph)DHAGPAIPSVVAYPK ddPTM_A549_PD325901_60min_R1 2 RYSDHAGPAIPSVVAYPK 18 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 RYS(1)DHAGPAIPSVVAYPK;RY(0.012)S(0.988)DHAGPAIPSVVAYPK 108.08 8.328e-10 60932000.0 2339.55 2189.9 2316.58 2401.3999999999996 2574.9 2714.2 2557.0 3357.0 2574.0 2466.8 2769.6000000000004 True False 2577.0593937143203 2374.450558454717 2473.7970495271993 2549.729024024898 2394.0479069227645 2692.0964550901426 2654.3080342440894 3290.0420014844444 2465.823731326116 2311.045827013277 2428.9567579409336 1.060973763855284 0.977559831269939 1.0184607204058576 1.0497218675009863 0.9856280475541433 1.1083344511131918 1.092776981544204 1.3545082639813921 1.015178110217341 0.951456142419097 1.0 11.246121090955551 -4.977823864897696 16.47778906860691 1.040638507194115 1.1080278285068406 0.0 0.1060223101455667 27345300.2031743 506804705.55363315 0.014470639999158442 47637204.90110041 1.0523886003836825e-05 4.977823864897696 0.06738932131272546 RYS(ph)EGDR ddPTM_A549_MK2206_60min_R1 2 RYSEGDR 7 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 RYS(1)EGDR;RYS(1)EGDR 70.908 0.016808 20469900.0 2352.7 2046.2 2023.6100000000001 1418.3 2322.4 2144.1 1735.2 1861.9099999999999 2468.0 3150.3 2977.4 True False 2749.778242007531 2150.342839973157 2310.5883267955223 1765.783563669907 1980.778036464677 2370.987238861608 2050.4633792073932 2125.8414443602323 1909.0019405861487 2438.6450420216274 2238.0294079403766 1.2286604600688016 0.960819742736126 1.0324208960783587 0.7889903311390934 0.8850545169053681 1.0594084378201225 0.9161914369545316 0.9498719886422811 0.8529834030835963 1.0896394092809862 1.0 11.128013278264596 -4.801816461794956 1.4528343559332426 0.9298899961515693 1.810410308546788 0.42999902013053415 0.08824039965903367 2.327705080177243 1.7717755946449054 0.011339182554198681 4.1265089865523255 1.578278128583118e-05 4.801816461794956 0.8805203123952187 RYS(ph)EREEK ddPTM_A549_MK2206_60min_R1 3 RYSEREEK 8 2 Q6PIJ6;Q6PIJ6-2;Q6PIJ6-3 Q6PIJ6 FBXO38 F-box only protein 38 1 RY(0.004)S(0.996)EREEK;RY(0.115)S(0.885)EREEK;RY(0.034)S(0.966)EREEK 53.236999999999995 0.008357700000000001 62785100.0 7775.7 7425.0 6165.88 5842.110000000001 6260.55 4542.58 4319.13 4691.38 5808.849999999999 8285.900000000001 8443.9 True False 9088.048062387019 7802.900785260818 7040.294499642707 7273.427212262289 5339.631388300436 5023.27280047944 5103.860013275717 5356.39748174869 4493.154749827328 6414.109435192527 6347.046590215536 1.4318546324202108 1.2293750604083473 1.1092236994913298 1.1459545961857032 0.8412781145378532 0.7914346821123394 0.8041314870988522 0.8439196728138079 0.7079126781192805 1.0105659922333599 1.0 12.63186971736096 -6.065258557012256 0.9299624864492075 0.8455652562826819 1.4218257872803755 0.7668920894750892 0.10174963420919533 0.3465350483981778 0.4337819360585842 0.01888482030813796 0.15130228104170534 8.604813125211884e-07 6.065258557012256 0.5762605309976936 RYS(ph)EREEK ddPTM_A549_PD325901_60min_R1 4 RYSEREEK 8 2 Q6PIJ6;Q6PIJ6-2;Q6PIJ6-3 Q6PIJ6 FBXO38 F-box only protein 38 1 RYS(1)EREEK;RY(0.037)S(0.963)EREEK;RY(0.008)S(0.992)EREEK;RY(0.001)S(0.999)EREEK 72.817 0.0017982 71886400.0 10160.579999999998 10002.5 9475.4 10778.4 11819.21 9656.630000000001 10502.09 11767.0 13714.0 17715.600000000002 16912.699999999997 True False 11192.074601776338 10845.445778776797 10118.457624208966 11444.15728847754 10989.069463660962 9577.98960692547 10901.752781914154 11532.297953967076 13137.64827171965 16597.0339926368 14832.545118438633 0.7545619792427428 0.7311925021751396 0.682179460329469 0.7715572207665884 0.740875512321903 0.6457414779759463 0.7349886816364353 0.777499603869807 0.8857312192084943 1.11896062746539 1.0 13.856478550821897 -8.97384639082036 0.9726282804435324 0.9707407794501762 0.7181833531681304 0.816629709339479 0.05809045684417617 0.10938803480438504 0.2128071669802479 0.009854993793326222 0.009302328874615328 1.0620711434320583e-09 8.97384639082036 -0.2525574262820458 RYS(ph)FRVPEEER ddPTM_A549_MK2206_60min_R1 4 RYSFRVPEEER 11 2 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6;H0Y7V8;H0Y6R0 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 RYS(1)FRVPEEER;RYS(1)FRVPEEER;RYS(1)FRVPEEER;RYS(1)FRVPEEER 140.03 1.0066e-09 163054000.0 5223.44 6151.369999999999 5026.749999999999 4773.01 8570.36 6290.099999999999 5315.37 5263.9400000000005 8946.15 8856.13 8812.75 True False 6105.028971153062 6464.4484583743915 5739.6187366732665 5942.397664268565 7309.67139708724 6955.714206969546 6281.103925736287 6010.11961514015 6919.861309065958 6855.524082150586 6624.300955473419 0.9216110518210527 0.9758687749585189 0.8664489695219582 0.897060339530404 1.10346305915457 1.0500299207001293 0.9481912080921443 0.907283599513124 1.04461759143783 1.0349052870984243 1.0 12.693552503559996 -6.7301333366948874 24.999649391543517 1.0141447314616945 0.9160917427383758 0.42215251277619914 0.05479277643789098 157.63693320348628 125881.3289137334 0.008110868785732948 0.016882886991894903 1.8615155281239782e-07 6.7301333366948874 -0.09805298872331869 RYS(ph)FRVPEEER ddPTM_A549_PD325901_60min_R1 7 RYSFRVPEEER 11 2 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6;H0Y7V8;H0Y6R0 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 RYS(1)FRVPEEER;RYS(1)FRVPEEER;RYS(1)FRVPEEER;RYS(1)FRVPEEER;RYS(1)FRVPEEER;RY(0.001)S(0.999)FRVPEEER;RY(0.027)S(0.973)FRVPEEER 164.15 2.1965e-14 266977500.0 10868.27 10808.109999999999 11608.94 10842.439999999999 12352.0 11016.96 10785.460000000001 11729.68 11880.720000000001 12453.380000000001 14436.289999999997 True False 11971.608769602493 11718.947360765345 12396.792478627234 11512.152893832143 11484.438132086676 10927.24153042145 11195.906582330173 11495.722330644052 11381.414654716713 11667.07146149288 12660.717849182229 0.9455710894288474 0.9256147637412429 0.9791539963453145 0.9092812138275183 0.9070921782550008 0.8630823039095886 0.8843026687505978 0.907983454617984 0.8989549242227093 0.9215173736966638 1.0 13.628071585902985 -10.727053648574987 0.9453398057484251 1.000810115352315 0.9125235662460297 0.07152893570537722 0.036661099102611054 0.37494351188845926 0.5866837449722611 0.022645525080769637 0.00564145398136039 1.8747629035343115e-11 10.727053648574987 -0.0882865491062853 RYS(ph)GDSDSSASSAQSGPLGTR ddPTM_A549_MK2206_60min_R1 2 RYSGDSDSSASSAQSGPLGTR 21 1 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 RYS(0.999)GDS(0.001)DSSASSAQSGPLGTR;RYS(0.997)GDS(0.002)DSSASSAQSGPLGTR 161.91 4.2320999999999995e-28 27401000.0 3017.1000000000004 3666.3 3026.6000000000004 2873.5 4442.0 3288.6000000000004 2916.8999999999996 3390.1 4322.8 4649.9 5318.299999999999 True False 3526.3127189870856 3852.8990099665643 3455.817390643122 3577.5076289963167 3788.5876842818197 3636.597469203995 3446.862973034834 3870.6570567458275 3343.692702093116 3599.484360504196 3997.6193323870834 0.8821031783637667 0.9637983733848658 0.8644688509097145 0.8949095277813991 0.9477109672720025 0.9096907851484917 0.8622289133709541 0.9682405289036254 0.836420985611081 0.9004069825615061 1.0 11.964925384702521 -11.069953584197334 1.3883770576502754 0.999940682828067 0.8973188557320726 0.0 0.04988577911373167 0.3175921940279031 1.0936702772472882 0.0301564120206238 0.006678697259814107 8.512290095779894e-12 11.069953584197334 -0.10262182709599443 RYS(ph)GDSDSSASSAQSGPLGTR ddPTM_A549_PD325901_60min_R1 2 RYSGDSDSSASSAQSGPLGTR 21 1 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 RYS(0.962)GDS(0.038)DSSASSAQSGPLGTR;RYS(0.976)GDS(0.023)DS(0.001)SASSAQSGPLGTR 164.2 2.4816999999999997e-28 32077000.0 8726.7 7819.8 8106.9 7365.2 10024.599999999999 8006.5 7398.6 7052.4 8665.5 8919.900000000001 8511.2 True False 9612.628159743008 8478.80198959049 8657.082984749955 7820.13167641717 9320.506678992562 7941.297718546618 7680.15777166927 6911.734349499225 8301.319170087983 8356.695991720346 7464.376356942114 1.2878005743645213 1.1359022621769235 1.1597865073749376 1.0476604209733063 1.2486651574480414 1.0638929950471951 1.0289081638449904 0.9259627353959833 1.1121249483042859 1.1195437625473352 1.0 12.865806013966097 -7.431276566091561 7.188519435160509 1.041320995230809 1.1654934788987965 0.43794503022219244 0.07567100501050131 0.21646322541692586 14.842014593767116 0.011237737748642429 0.017979697902146645 3.7044474115853424e-08 7.431276566091561 0.12417248366798761 RYS(ph)GNMEYVISR ddPTM_A549_MK2206_60min_R1 3 RYSGNMEYVISR 12 1 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 RY(0.01)S(0.99)GNMEYVISR;RY(0.014)S(0.986)GNMEYVISR;RYS(1)GNMEYVISR 163.34 1.4083000000000001e-14 43557000.0 3267.19 3398.6 3823.27 3910.2 4804.799999999999 4051.9 3600.5 3763.37 6191.5 4854.700000000001 5818.599999999999 True False 3818.611796873626 3571.5742234057147 4365.467176080133 4868.199175535545 4098.020284880072 4480.66936856646 4254.664244373111 4296.839222337258 4789.13513579382 3758.0198982644215 4373.681034809522 0.8730887704160004 0.816606011041969 0.9981219803949999 1.1130668050070915 0.9369728272968457 1.0244618509912893 0.9727879583606638 0.9824308604443968 1.0949895746118101 0.8592350169925198 1.0 12.094632295565285 -5.835797976445212 5.212298246735149 1.0312722593692234 0.8451669411567792 0.334315638377481 0.07263948606235582 0.08808636498194951 4.243917037231276 0.007648629376228579 0.025314584889272157 1.4594930241389205e-06 5.835797976445212 -0.18610531821244425 RYS(ph)GNMEYVISR ddPTM_A549_PD325901_60min_R1 5 RYSGNMEYVISR 12 1 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 RY(0.002)S(0.997)GNMEYVISR;RY(0.017)S(0.983)GNMEYVISR;RYS(1)GNMEYVISR;RYS(1)GNMEYVISR;RYS(1)GNMEYVISR 189.45 6.6596e-20 79420000.0 6892.299999999999 7336.0 6504.799999999999 7074.4 8239.0 7418.2 6636.3 7035.299999999999 7579.500000000001 7835.999999999999 7480.8 True False 7592.001222156909 7954.230465694236 6946.25484454002 7511.369620871879 7660.321063006977 7357.78863869637 6888.8480280226995 6894.975422413917 7260.959973421258 7341.233622699878 6560.709024698346 1.157192186633514 1.2124040916537924 1.0587658770401573 1.1449021123471093 1.167605670998218 1.1214929073972568 1.05001578367354 1.0509497367521097 1.106734035313372 1.118969549642147 1.0 12.679636021935437 -14.999999999815163 0.05594934757036889 0.5284583789998349 1.3368674363712774 0.23322656531798436 0.052302321111809755 157.4138748541585 0.6684983898677116 10.633887878213663 2.111905741621565 1.000000000425603e-15 14.999999999815163 0.8084090573714424 RYS(ph)PDELR ddPTM_A549_MK2206_60min_R1 2 RYSPDELR 8 1 S5FZ81;Q8WUB8-3;Q8WUB8-2;Q8WUB8 S5FZ81 PHF10 PHD finger protein 10 1 RYS(1)PDELR;RYS(1)PDELR 141.08 0.00044738 47970000.0 1827.74 2059.87 2042.34 1753.58 2736.3 1684.31 2141.7 2001.61 2978.5 3096.3 3045.1 True False 2136.2178280472835 2164.7085845838665 2331.974522436421 2183.207178721197 2333.793894754692 1862.5425662455082 2530.8191673861656 2285.344347173538 2303.8745056871335 2396.843679526256 2288.91762951543 0.9332873321874526 0.9457345937966939 1.0188110276952633 0.9538164023767811 1.0196058891157052 0.8137219715677639 1.1056838108769982 0.9984388768316454 1.0065344755000512 1.0471515657091053 1.0 11.160449830723959 -7.799818974754162 24.99999975476321 1.009736922588483 0.9542219373544351 0.2959681388504949 0.059951485402648406 202.1417586419632 131671.95392513298 0.00847484033715552 0.011709791749041 1.5855539549044253e-08 7.799818974754162 -0.05551498523404785 RYS(ph)PDELR ddPTM_A549_PD325901_60min_R1 2 RYSPDELR 8 1 S5FZ81;Q8WUB8-3;Q8WUB8-2;Q8WUB8 S5FZ81 PHF10 PHD finger protein 10 1 RYS(1)PDELR;RYS(1)PDELR 112.94 0.00058544 45683000.0 2614.4 3033.0 2488.0 2567.7 2788.2 3004.3 3086.8 3109.3 3067.0 3157.3 3537.4 True False 2879.8119633804436 3288.601554314426 2656.850641559399 2726.3009973301964 2592.366450767819 2979.8339768724904 3204.2698631617714 3047.2825723013357 2938.1046557797986 2957.9475391718115 3102.3222254261477 0.928276224751238 1.0600451259903185 0.8564070552646874 0.8787936259444167 0.8356212741285186 0.960517238490005 1.0328617178770396 0.9822585633839981 0.9470662433771555 0.9534623821242475 1.0 11.599132825607752 -7.507144841014093 24.71790725295746 0.9797432782132024 0.9134407092233685 0.2558120399625188 0.058168074852857625 743.8278224785214 1168551.2974985985 0.009051454019731293 0.014205367838044717 3.1106787254851525e-08 7.507144841014093 -0.06630256898983389 RYS(ph)PPIQR ddPTM_A549_MK2206_60min_R1 7 RYSPPIQR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR 107.11 0.00077522 2035351700.0 15229.72 15551.9 13867.4 12986.52 18174.5 12967.95 13109.710000000001 14909.72 19879.0 20249.5 20985.4 True False 17800.12440509495 16343.425282464343 15834.005842531027 16168.21798298704 15501.055125614565 14340.209861571462 15491.574612165141 17023.218469102496 15376.438240239888 15675.123886111462 15774.146012424259 1.128436645069404 1.0360893876341515 1.0037948063913964 1.024982142947859 0.9826874376213712 0.9090957982940326 0.9820864216651377 1.0791847910938839 0.9747873658662014 0.9937225047723786 1.0 13.945274281620009 -4.604740509251335 0.9863456023312008 0.9894943583342468 1.4716180159253476 0.5156201850971109 0.03815870604544969 3.541690819096666 1.0575951090012767 0.0057379145529078916 2.481093879429648 2.4846172194926472e-05 4.604740509251335 0.48212365759110076 RYS(ph)PPIQR ddPTM_A549_PD325901_60min_R1 6 RYSPPIQR 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR 116.55 0.00053642 3214282000.0 16657.5 16584.2 16901.5 15719.0 19020.5 17734.2 17019.9 18009.899999999998 18875.899999999998 20900.899999999998 19732.2 True False 18348.55713739662 17981.808736254963 18048.537426975956 16689.92692956084 17684.56569716278 17589.77855495526 17667.601608146655 17650.678416006773 18082.61156571042 19581.213607030084 17305.264492721715 1.060287587347405 1.0390947069209946 1.0429506832771522 0.9644421751878063 1.021918255256982 1.0164408964886498 1.020937970383367 1.0199600487718827 1.044919687492534 1.1315177306458155 1.0 14.078923371293891 -6.029717684587805 24.971563296761868 1.0176948698115622 1.0475240709294362 0.006701911829657958 0.03944479680901164 667.9990288889885 561314.5278397633 0.0031030723968855684 0.00822873321194255 9.33861164890036e-07 6.029717684587805 0.029829201117874016 RYS(ph)PS(ph)PPPK ddPTM_A549_MK2206_60min_R1 3 RYSPSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RY(0.009)S(0.997)PS(0.994)PPPK;RY(0.009)S(0.997)PS(0.994)PPPK;RY(0.233)S(0.991)PS(0.776)PPPK 60.157 0.0020372 214642000.0 17842.9 17641.4 16859.4 14067.3 21389.5 16996.3 16278.5 16475.8 24616.7 25442.199999999997 26407.9 True False 20854.345302977927 18539.271907488255 19250.316432897856 17513.789131505084 18243.132884499326 18794.837184769163 19236.092737683015 18811.295105021352 19041.056754792167 19694.789349624683 19850.089609037626 1.0505919980070553 0.9339641418569433 0.9697848630433035 0.8823027742671329 0.919045366736951 0.9468389087881994 0.9690683073251688 0.9476680194157251 0.9592428613583129 0.9921763446678732 1.0 14.276857899674479 -10.144297816305999 0.6141024559347944 1.000780548646333 0.9485690894169372 0.14804937901897752 0.039088509080371044 1.0554402354374761 0.7487596549809874 0.02701188636066943 0.008719084435632084 7.17302234444599e-11 10.144297816305999 -0.05221145922939585 RYS(ph)PS(ph)PPPK ddPTM_A549_PD325901_60min_R1 4 RYSPSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RY(0.04)S(0.986)PS(0.974)PPPK;RY(0.059)S(0.971)PS(0.971)PPPK;RY(0.011)S(0.996)PS(0.993)PPPK;RY(0.511)S(0.973)PS(0.516)PPPK 62.303000000000004 0.0051178000000000005 455817000.0 51298.1 50872.1 53772.0 53217.6 60379.0 52208.0 49291.8 52721.3 60518.0 60989.0 67482.0 True False 56505.84534833472 55159.27040265047 57421.29127730386 56504.73028606121 56138.18733624204 51782.83535750725 51167.62642250791 51669.73231244029 57974.638917013945 57138.14413155216 59182.141803643164 0.9547786481910714 0.9320255861246128 0.9702469279976125 0.9547598069960838 0.948566334799094 0.8749740002535625 0.8645788216363286 0.8730628993433891 0.9795968369878278 0.9654625937859319 1.0 15.852874288206678 -8.915663194069776 7.99170846568004 0.9910578238447918 0.9221615907861735 0.35696950328763377 0.03558176174339072 0.18413055666127823 15.287868403522241 0.006791448346697464 0.007207723626345848 1.214330228004455e-09 8.915663194069776 -0.06889623305861825 RYS(ph)PS(ph)PPPKR ddPTM_A549_PD325901_60min_R1 2 RYSPSPPPKR 10 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 RY(0.019)S(0.997)PS(0.984)PPPKR;RY(0.001)S(1)PS(0.999)PPPKR 77.89399999999999 0.00043319999999999996 75413000.0 4797.6 6119.0 5584.799999999999 5237.200000000001 7008.9 6479.6 5791.6 6214.7 7358.1 7628.9 6415.4 True False 5284.64882019355 6634.669604632364 5963.818112130592 5560.689949455819 6516.619043392348 6426.832285904531 6012.002507285123 6090.742933162165 7048.86464548201 7147.209952043776 5626.346470571296 0.9392682885483499 1.1792145470129007 1.0599806007903083 0.9883305229319072 1.1582328030237097 1.1422745327754327 1.0685446654824775 1.0825396134098573 1.2528315990405534 1.2703110250012835 1.0 12.45798268125076 -6.775495827831227 24.992533691354517 1.1192135058561499 1.0528269136496542 0.1821099290880961 0.09241364966578393 470.22423893332905 836064.2772032424 0.014900859150739694 0.02826120762396533 1.6768884451588952e-07 6.775495827831227 -0.06638659220649568 RYS(ph)PSPPPK ddPTM_A549_PD325901_60min_R1 2 RYSPSPPPK 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 RYS(0.861)PS(0.139)PPPK;RYS(0.906)PS(0.094)PPPK 62.088 0.0030694000000000003 54446000.0 13285.400000000001 13245.3 13742.3 13548.1 15379.0 13772.8 12756.5 14632.4 15816.099999999999 15470.7 17240.3 True False 14634.124027805434 14361.527915384397 14674.935117163062 14384.935367032445 14298.832094669768 13660.638883157284 13241.955588124645 14340.545303104256 15151.4043189693 14493.877361753828 15119.852395266129 0.9678747943589203 0.9498457749416155 0.9705739668303663 0.9513939019362532 0.945699185472643 0.9034902276846493 0.8757992632435067 0.948458022486657 1.0020867878123632 0.9585991306563094 1.0 13.884156435136411 -8.718490805537964 5.059121298729011 1.0010812466539798 0.9373987654093106 0.3241718823374107 0.028980446456553562 0.11495732549288211 6.6808079808355565 0.004838352303027464 0.0054157333149475375 1.9120938051736716e-09 8.718490805537964 -0.06368248124466924 RYS(ph)PVAK ddPTM_A549_MK2206_60min_R1 2 RYSPVAK 7 1 A0A3B3IU19;A0A3B3ISR0;B7Z647;B7Z3U2;A0A3B3IS17;A0A3B3ISQ5;B9EGL1;P78352-3;P78352;P78352-2 A0A3B3IU19 DLG4 Disks large homolog 4 1 RYS(1)PVAK;RY(0.001)S(0.999)PVAK 68.557 0.009485700000000001 29271000.0 3597.8 3503.6 2904.9 2992.9 4182.6 3144.8 3407.4 3356.1 4711.3 4976.200000000001 5548.9 True False 4205.020682235174 3681.9182749144506 3316.8585006539374 3726.160634356388 3567.3450806567157 3477.5806486507086 4026.480473899998 3831.8374526251923 3644.1980724001305 3852.0729638790044 4170.954988150853 1.0081673607557735 0.8827518602752384 0.795227594178481 0.893359109590473 0.8552825649739891 0.8337612509677205 0.9653617661515675 0.9186954698650429 0.8737083192584981 0.923546999385572 1.0 12.026162027787825 -11.059206344166553 0.5528283148142201 1.0343027220255951 0.8849409481008127 0.11020309355376345 0.06036498063986724 1.5260028131645984 0.5248187785403511 0.1251839968958314 0.012175074289287605 8.725566963833402e-12 11.059206344166553 -0.14936177392478245 RYS(ph)PVAK ddPTM_A549_PD325901_60min_R1 2 RYSPVAK 7 1 A0A3B3IU19;A0A3B3ISR0;B7Z647;B7Z3U2;A0A3B3IS17;A0A3B3ISQ5;B9EGL1;P78352-3;P78352;P78352-2 A0A3B3IU19 DLG4 Disks large homolog 4 1 RYS(1)PVAK;RY(0.009)S(0.991)PVAK 81.09899999999999 0.0065117000000000005 23984300.0 5099.84 4890.6 5006.21 5132.4 6515.7 4979.38 5507.1 5781.299999999999 5520.7 6495.2 6376.1 True False 5617.57200249622 5302.748025562192 5345.961515386283 5449.416691473888 6058.05970994472 4938.82958018818 5716.67570410075 5665.987436157885 5288.684177751399 6085.091963522234 5591.880121428068 1.0045944978272514 0.9482942964463915 0.9560221963451209 0.9745231609296736 1.0833672357764348 0.8832144954722115 1.0223172850566782 1.0132526651359777 0.9457792482863101 1.0882014333970036 1.0 12.449117717250427 -11.322889244441045 1.9271220460203007 1.0001268027871482 0.9750934129625214 0.055646347435562404 0.056109432227670925 1.1686627079891396 7.837543794758859 0.03579832000409748 0.006934771297209206 4.754564633391035e-12 11.322889244441045 -0.025033389824626773 RYS(ph)SQR ddPTM_A549_MK2206_60min_R1 1 RYSSQR 6 1 O15234 O15234 CASC3 Protein CASC3 1 RYS(0.752)S(0.248)QR 58.981 0.028297000000000003 5286900.0 596.23 516.57 204.25 347.17 318.67 441.15 291.08 403.75 469.16 797.49 890.04 True False 696.8590475760404 542.8612065511355 233.21572128423222 432.22666558505335 271.79406513959646 487.8322001883297 343.9654681994512 460.9827989325176 362.8960090945698 617.3364551191407 669.0185041456477 1.041614011059299 0.8114292851202702 0.3485938278823157 0.6460608531852448 0.40625791881000933 0.7291759453070776 0.5141344612563492 0.6890434211848945 0.5424304512443889 0.9227494475769303 1.0 9.385902304184022 -10.810505232730417 0.9466954296197237 1.0107213075407195 0.62245411773402 0.311789922237379 0.18406943584901878 0.520616320281914 0.7902107679790064 0.14302843732405843 0.03182794649401732 1.54701586413997e-11 10.810505232730417 -0.3882671898066995 RYS(ph)SQR ddPTM_A549_PD325901_60min_R1 1 RYSSQR 6 1 O15234 O15234 CASC3 Protein CASC3 1 RYS(0.987)S(0.013)QR 61.961999999999996 0.025866000000000004 6994500.0 594.69 576.08 485.9 363.18 583.13 467.99 360.94 641.03 553.82 644.14 821.86 True False 655.0624910123606 624.6282833529358 518.8760959540642 385.61280375837526 542.1729604892897 464.1788446015901 374.6757692139467 628.2441537716933 530.5448713609289 603.4688904703801 720.7764301997886 0.9088289566166682 0.8666047572890224 0.7198849382605913 0.5349964116494335 0.7522068394203836 0.6439983678058486 0.5198224491193366 0.8716213897249017 0.7360741127645777 0.8372483688223648 1.0 9.49340802474714 -10.471681239069804 0.6522733755771691 1.0152898997480784 0.7175904384324406 0.2134658528511043 0.12920265076643875 0.6839395867105926 0.48740964956905847 0.11017010203046844 0.026309299868165017 3.375349597035938e-11 10.471681239069804 -0.29769946131563774 RYS(ph)TTR ddPTM_A549_MK2206_60min_R1 3 RYSTTR 6 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 RY(0.033)S(0.826)T(0.122)T(0.019)R;RY(0.002)S(0.919)T(0.039)T(0.039)R;RYS(0.972)T(0.01)T(0.019)R 56.81 0.035424000000000004 57747000.0 1822.18 2126.1 1905.96 1858.7999999999997 2798.5699999999997 2256.38 1605.53 1769.62 2957.45 2691.1 2516.75 True False 2129.719435976233 2234.3094086926635 2176.25378770573 2314.206083444701 2386.904060243263 2495.1486339361745 1897.2340186830602 2020.4690542339613 2287.5922970771894 2083.1786409498786 1891.7715162336067 1.1257804749150495 1.1810672639479356 1.1503787688052882 1.22330105067452 1.2617295692216746 1.3189481988310365 1.0028875064470413 1.068030170079198 1.2092328684764406 1.1011787750654747 1.0 10.885522138507463 -12.049257245451313 0.3863670863013194 0.7997315964325724 1.1846737531367908 0.18274226650985503 0.08819757256438636 5.2620166151117855 0.47213875699008856 0.9703856369097548 0.02472097140685854 8.927765091848464e-13 12.049257245451313 0.3849421567042184 RYS(ph)TTR ddPTM_A549_PD325901_60min_R1 2 RYSTTR 6 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 RYS(0.522)T(0.184)T(0.294)R;RYS(0.845)T(0.012)T(0.142)R 91.78299999999999 0.015472999999999999 48264000.0 2983.0 2549.52 2786.7 3215.1 3356.3999999999996 2581.7 3176.2 2833.5 3361.3 3143.2 3202.5 True False 3285.831964031466 2764.376997941217 2975.822219788413 3413.6894249781185 3120.6580429514015 2560.675491159908 3297.072029083331 2776.98361966225 3220.036250235615 2944.737815578133 2808.6128023201313 1.1699127630968267 0.9842499456164366 1.059534520860317 1.2154361121469457 1.1111029759507955 0.9117225019570486 1.1739147618923103 0.9887385037083954 1.1464863535392333 1.0484669916570741 1.0 11.455642031705283 RYS(ph)TYDDR ddPTM_A549_MK2206_60min_R1 2 RYSTYDDR 8 1 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 RYS(0.994)T(0.006)YDDR;RYS(0.999)T(0.001)YDDR 134.13 0.00045154 12276300.0 1772.99 1892.49 1624.19 1335.3899999999999 2040.8000000000002 1482.3200000000002 1088.75 1276.46 1869.7799999999997 2740.8 2208.51 True False 2072.227366556266 1988.8096575216507 1854.5245647619934 1662.5606099479348 1740.6010234314122 1639.1781185156187 1286.5617819917295 1457.4021139948027 1446.277815425109 2121.6513764317297 1660.076015224827 1.2482725776118275 1.1980232466959067 1.117132316685409 1.0014966752728918 1.0485068198492582 0.9874114820541047 0.7750017289524469 0.8779128790662181 0.8712118012434733 1.2780447142020728 1.0 10.697033589051768 -6.130974937157649 0.8662431077847788 0.9240408712500835 1.2755425094695758 0.3532829436779197 0.12405100541550666 0.3810556411321666 0.4124463631402252 0.012198678256818507 0.09539915321233625 7.396479584126455e-07 6.130974937157649 0.3515016382194923 RYS(ph)TYDDR ddPTM_A549_PD325901_60min_R1 2 RYSTYDDR 8 1 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 RYS(0.996)T(0.004)YDDR;RYS(0.993)T(0.007)YDDR 110.08 0.00067866 21262000.0 3581.7000000000003 3749.6000000000004 3242.1 4037.4 3591.2000000000003 4334.8 3562.8999999999996 3751.0 3990.2 4192.2 4463.5 True False 3945.311547291818 4065.5919512223427 3462.128402331076 4286.781028399318 3338.9665009674295 4299.4988259983575 3698.4881091936873 3676.1833623974253 3822.5057702942795 3927.503776554674 3914.517796457738 1.0078665502202968 1.038593298745841 0.8844329192893104 1.0950981069184158 0.8529700654289714 1.0983469866681894 0.9448132059944812 0.9391152508551673 0.976494671643409 1.0033173894645944 1.0 11.934618887068565 -10.773854697834736 1.214066047987309 0.9992694056130588 0.9812271345701541 0.01008420386248321 0.07364049806191919 2.6781398960560545 7.410819553013233 0.036526483104057615 0.010882911181305088 1.683237128527864e-11 10.773854697834736 -0.01804227104290468 RYS(ph)VSER ddPTM_A549_MK2206_60min_R1 2 RYSVSER 7 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 RYS(0.994)VS(0.006)ER;RYS(0.992)VS(0.008)ER 95.09 0.009596299999999999 31596000.0 4940.8 5704.8 4929.7 5141.6 7291.5 6014.5 5220.5 6193.8 9352.7 9085.2 9741.0 True False 5774.686249037617 5995.149952829086 5628.805587343356 6401.2922308151965 6218.930008991642 6650.9503978980165 6168.997274753459 7071.790117716967 7234.328383192904 7032.847010054567 7322.040862076715 0.7886716774481057 0.8187812750240117 0.7687481801005526 0.8742497278278817 0.8493437999235363 0.9083465284037816 0.842524289464806 0.965822268808157 0.9880207608048047 0.9605036549959755 1.0 12.83803010956799 -7.751179572090361 0.5459270237034461 1.0033723993747274 0.7917742002850217 0.8100088728141834 0.0339935788465741 0.20175433465292908 0.12339762707633466 0.007911733831879644 0.01652699958998226 1.773456040632886e-08 7.751179572090361 -0.21159819908970579 RYST(ph)SGSSGLTTGK ddPTM_A549_PD325901_60min_R1 1 RYSTSGSSGLTTGK 14 1 B9A067;Q16891-3;Q16891-2;Q16891-4;Q16891;D6RAW4;A0A087WYS0 B9A067 IMMT MICOS complex subunit MIC60 1 RYS(0.242)T(0.487)S(0.116)GS(0.121)S(0.033)GLTTGK 69.188 0.0018120999999999999 7814100.0 4588.3 4044.9 3673.7 4988.8 4867.6 4466.7 4223.1 3645.9 4677.3 4694.5 5483.0 True False 5054.100838272065 4385.777918577787 3923.0193737527147 5296.946845613145 4525.716568308383 4430.324676129666 4383.812381468992 3573.1796643467796 4480.729346748894 4398.088468831617 4808.625759600712 1.051048904810537 0.9120647224045907 0.8158296298937736 1.1015510689384531 0.941166311242358 0.9213286493098897 0.9116559700485 0.7430770958236271 0.9318107856081018 0.9146248197940062 1.0 12.231408934773073 -10.225288296156378 1.2047520900529416 0.9918696612279182 0.9238586058239612 0.0 0.09482828170455354 0.8207000430102053 2.3726600231182498 0.032708087125747756 0.016343161966363498 5.95266858468419e-11 10.225288296156378 -0.06801105540395702 RYT(ph)IIPLNK ddPTM_A549_MK2206_60min_R1 1 RYTIIPLNK 9 1 O95347-2;O95347 O95347-2 SMC2 Structural maintenance of chromosomes protein 2 1 RY(0.008)T(0.992)IIPLNK 46.592 0.022345 1557200.0 789.62 844.03 863.31 691.73 1164.0 835.99 706.37 1019.0 1251.6 1157.9 1349.5 True False 922.888551644487 886.987521856389 985.74033949518 861.2038810529393 992.7771419414755 924.4539069147495 834.7082855986212 1163.44637055662 968.1145983944997 896.3295858035243 1014.381905694746 0.9098038386364989 0.8744118136146118 0.9717645138987869 0.8489937332459655 0.9787015485666876 0.9113470003012276 0.822873792318814 1.1469510290207516 0.9543886705386784 0.8836214257879845 1.0 9.986385201027597 -8.215305802549306 24.99998079258818 0.9904964699413377 0.9053426170334279 0.2761297009765843 0.07266162411528192 400.70755786133594 217145.3545447047 0.009909550575973092 0.012793155189252175 6.091078512000943e-09 8.215305802549306 -0.08515385290790978 RYT(ph)IIPLNK ddPTM_A549_PD325901_60min_R1 2 RYTIIPLNK 9 1 O95347-2;O95347 O95347-2 SMC2 Structural maintenance of chromosomes protein 2 1 RY(0.02)T(0.98)IIPLNK;RY(0.001)T(0.999)IIPLNK 64.878 0.0037512 5365600.0 2926.1000000000004 2900.2 2877.8 2968.8999999999996 3045.4 3269.5 3241.0 3032.6 2929.6 4022.8 3307.6000000000004 True False 3223.155517919031 3144.610032252783 3073.104813617215 3152.2822101388847 2831.50161005965 3242.87427599927 3364.338028543252 2972.112413971321 2806.479099958429 3768.799721464656 2900.786168603925 1.1111317176026987 1.084054407831862 1.0594041184001586 1.0866992694108157 0.9761152478958419 1.1179294465403438 1.159802147761351 1.0245885912375692 0.9674891346124682 1.2992338981257912 1.0 11.502228235880617 -8.512106680103255 15.158075113233409 0.9852458453137256 1.0819292972282364 0.0 0.10403920688049746 1.8043286953244764 2538.425759492951 0.007295958376779701 0.008553120698351804 3.075341295068268e-09 8.512106680103255 0.09668345191451078 RYT(ph)MSR ddPTM_A549_MK2206_60min_R1 1 RYTMSR 6 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;J3KT37 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4;Q9Y2J2 EPB41L1;EPB41L3 Band 4.1-like protein 1;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 RY(0.001)T(0.996)MS(0.003)R 48.756 0.031698000000000004 12363000.0 904.37 873.54 783.63 645.33 1386.0 921.54 774.82 1079.1 1425.4 1472.8 1204.6 True False 1057.0055462763426 917.9994548089887 894.7605173559995 803.4358789699647 1182.1212360230982 1019.0567511312554 915.5947645674696 1232.0657296051506 1102.5491758960688 1140.0934570959764 905.4645747313019 1.1673626730123712 1.0138435897190197 0.9881783808290028 0.8873189535972577 1.3055411211133185 1.1254518172990502 1.0111878367402434 1.3607000914097254 1.2176613052180998 1.2591254135307293 1.0 9.822514388256376 -6.746103553528677 24.99982161296493 1.1312285932586272 1.0122952621876586 0.23114122580279606 0.127487408231004 374.01788233571887 609705.0627225293 0.019287671329323238 0.04003538815163326 1.7943057401050496e-07 6.746103553528677 -0.1189333310709686 RYT(ph)VSSK ddPTM_A549_PD325901_60min_R1 1 RYTVSSK 7 1 Q16825;G3V1Q9;G3V3S6 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RY(0.093)T(0.903)VS(0.003)SK 43.651 0.053775 2058100.0 1529.2 1837.3 1643.6 1607.1 1837.9 1917.2 1743.1 1539.0 1779.1 1883.6 1903.1 True False 1684.4432582624584 1992.1357190049116 1755.1445797697052 1706.3669170110818 1708.8122444107935 1901.5869588456337 1809.4346243609184 1508.3034376778553 1704.3306139869046 1764.669174542814 1669.0307647448697 1.0092343974977265 1.1935883754122605 1.0515951034839066 1.022369960491363 1.023835078721275 1.1393360739736351 1.0841229907691432 0.9037002010615525 1.0211499092693064 1.0573017656822903 1.0 10.70479483237386 RYTIYS(ph)PK ddPTM_A549_MK2206_60min_R1 1 RYTIYSPK 8 1 A0A6I8PRU9;A0A6I8PTV8;A0A6I8PIP7;A0A6I8PLB3;A0A6I8PS05;A0A6I8PLB8;A0A6I8PRS0;A0A6I8PL42;B4DER1;A0A6I8PIT3;A0A6I8PIV1;Q9P2J5-2;Q9P2J5 A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic 1 RY(0.003)T(0.162)IY(0.003)S(0.833)PK 42.001000000000005 0.034906 15354000.0 2900.5 2677.4 2759.3 2770.5 4038.3 2550.2 2780.4 2936.5 3966.7 4413.2 4414.4 True False 3390.03348958339 2813.668223899977 3150.6102312831445 3449.272624372473 3444.2714195036638 2820.060471314244 3285.562689919454 3352.757867654087 3068.2487835182656 3416.2550548994877 3318.1826487579738 1.0216536726368304 0.8479545949506905 0.9494987361417392 1.0395065581044995 1.0379993460555543 0.8498810251960718 0.9901693299340439 1.010419926374172 0.9246774841242508 1.029556060206096 1.0 11.696177586026655 -8.941887965318454 0.0033017455155460737 1.9304525661234175 1.3443181648417689e-08 0.016806433734427917 0.06706435278392231 43709.10893171996 103.86241706935047 30436.51550088586 30285.505075232562 1.1431732004454497e-09 8.941887965318454 -1.9304525526802359 RYTIYS(ph)PK ddPTM_A549_PD325901_60min_R1 1 RYTIYSPK 8 1 A0A6I8PRU9;A0A6I8PTV8;A0A6I8PIP7;A0A6I8PLB3;A0A6I8PS05;A0A6I8PLB8;A0A6I8PRS0;A0A6I8PL42;B4DER1;A0A6I8PIT3;A0A6I8PIV1;Q9P2J5-2;Q9P2J5 A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic 1 RY(0.003)T(0.198)IY(0.003)S(0.796)PK 42.001000000000005 0.034906 19484000.0 2755.7 2505.9 2792.4 2475.4 3498.4 2768.1 2479.0 2881.0 2776.4 2834.2 3255.3 True False 3035.4566353608793 2717.080987456815 2981.909056065296 2628.2998359587045 3252.6844528248103 2745.5575113606305 2573.3397015608525 2823.5361948992218 2659.7175631910773 2655.248128312402 2854.9187370469103 1.0632374911310838 0.9517192038423227 1.0444812377215833 0.9206215931306622 1.139326458093635 0.9616937518160669 0.9013705602782518 0.9890075532657191 0.9316263642383928 0.9300608433636031 1.0 11.479233965687 RYVELTDLEQK ddPTM_A549_MK2206_60min_R1 1 RYVELTDLEQK 11 1 Q96C74 Q96C74 ROPN1L Ropporin-1-like protein 0 42.743 0.023499000000000003 1468700.0 1295.2 1406.1 706.41 768.64 1685.7 1481.1 960.89 561.59 1709.8 1792.5 1524.1 False True 1513.798095400243 1477.664484061311 806.5895602075615 956.9568345055609 1437.7357630332867 1637.8290189253896 1135.471275038377 641.1971022972448 1322.533029989545 1387.5730050546838 1145.623906979891 1.321374393618354 1.289833840807975 0.7040613898621438 0.8353150005644551 1.254980586799611 1.4296393510528742 0.9911379014704061 0.5596924945356432 1.1544216404107908 1.2111941769028043 1.0 10.161917788977325 -11.341373878042349 1.9776978460978498 0.9995656472882426 1.0690848710531142 0.0 0.26647111325537176 2.3692939136737654 16.74058917064282 0.2063056849354359 0.03945207317401514 4.556444890933509e-12 11.341373878042349 0.06951922376487163 RYWEEETVPTTAGAS(ph)PGPPR ddPTM_A549_MK2206_60min_R1 2 RYWEEETVPTTAGASPGPPR 20 1 O15213 O15213 WDR46 WD repeat-containing protein 46 1 RYWEEETVPTTAGAS(1)PGPPR;RYWEEETVPTT(0.018)AGAS(0.982)PGPPR 164.05 1.3007999999999999e-27 89719000.0 6740.1 8044.299999999999 7036.0 5962.6 9373.0 8194.8 6512.299999999999 6712.7 9888.400000000001 10339.6 9134.0 True False 7877.664100376146 8453.720510016645 8033.810599539084 7423.437267671284 7994.244116338022 9061.968296732004 7695.500613423413 7664.245781781573 7648.693188530016 8003.877178835926 6865.775714424462 1.1473815091025745 1.2312841056336916 1.1701242414110136 1.081223386321114 1.164361384474406 1.3198753751442116 1.1208494034047403 1.1162971382359006 1.1140319035561714 1.1657644397005864 1.0 12.7452070139391 -9.697265097339194 0.4871264018745885 0.9962554565059822 1.1814557978277522 0.05522928074246214 0.07575016871009037 0.5519146423209806 0.2806818572065369 0.04290762281009178 0.018360021523737117 2.0078668181267957e-10 9.697265097339194 0.18520034132177 RYWEEETVPTTAGAS(ph)PGPPR ddPTM_A549_PD325901_60min_R1 2 RYWEEETVPTTAGASPGPPR 20 1 O15213 O15213 WDR46 WD repeat-containing protein 46 1 RYWEEETVPTT(0.001)AGAS(0.999)PGPPR;RYWEEETVPTT(0.003)AGAS(0.997)PGPPR 184.88 4.3977999999999994e-44 157682000.0 4238.6 4894.4 4981.0 5410.9 5551.5 6145.2 4776.1 4197.799999999999 6008.6 5977.5 5580.5 True False 4668.899551707598 5306.868264898291 5319.040613186238 5745.119003954494 5161.581791635297 6095.1555286345665 4957.857099082204 4114.071585889605 5756.0794374693505 5600.079629873467 4894.133877704138 0.9539787158208679 1.0843324677067823 1.0868195979308652 1.1738785957873217 1.0546466281091231 1.2454002446483612 1.0130203265726678 0.8406128006901877 1.1761181000160044 1.1442432450377698 1.0 12.25683785115052 -11.261675181005188 1.7691543324319468 0.9997670405230025 1.0880289446876619 0.0 0.11502640320700094 0.8148280501473931 4.593985843286365 0.08168336111095444 0.01641868546967276 5.4742524195493295e-12 11.261675181005188 0.0882619041646594 S(ph)AADWSAGIK ddPTM_A549_MK2206_60min_R1 3 SAADWSAGIK 10 0 Q13393-4;Q13393-2;Q13393;H7C0L3 Q13393-4 PLD1 Phospholipase D1 1 S(1)AADWSAGIK;S(0.999)AADWS(0.001)AGIK;S(0.997)AADWS(0.003)AGIK 48.284 0.025112 1222003000.0 9860.9 10116.7 10819.2 9166.199999999999 12992.8 10228.1 9220.3 10140.900000000001 14528.5 15522.3 15384.1 True False 11525.178844141652 10631.59681808056 12353.52524709115 11411.91941148635 11081.576331458084 11310.430753136709 10895.509160503649 11578.403630203764 11237.817947247104 12015.801649294463 11563.803390439822 0.9966598752163063 0.9193858161640877 1.0682925703583146 0.9868655688941373 0.9582985768003968 0.978089160741648 0.9422080947442713 1.0012625811137548 0.9718098421266639 1.039087335160707 1.0 13.497328364763044 -10.930734095868765 1.1210425593959312 1.0002935387390308 0.9793711350805459 0.0953453427606108 0.03793384198111836 1.538472397022659 3.3534167574506255 0.02565866127627109 0.005688587575479508 1.1729132817133208e-11 10.930734095868765 -0.020922403658484967 S(ph)AAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK ddPTM_A549_MK2206_60min_R1 1 SAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK 37 2 O00267;O00267-2;M0R2M5 O00267 SUPT5H Transcription elongation factor SPT5 1 S(0.5)AAGS(0.5)EKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK 67.58 8.693200000000001e-05 5710200.0 928.39 747.47 737.06 917.95 825.49 758.75 808.28 811.67 806.96 924.03 1280.5 True False 1085.079535043724 785.5130302974962 841.5861910881573 1142.8477912083413 704.0615145199905 839.0404213825127 955.1340134542135 926.7267081351241 624.1848484503237 715.2909812332937 962.5165099978676 1.1273360236138994 0.8161034352535278 0.8743602653527697 1.1873539615552913 0.7314799353639662 0.8717153551832285 0.9923300052861738 0.962816428091376 0.6484926148972826 0.7431467136442972 1.0 9.910667477158214 -7.1318824810063095 0.8939037312440589 0.8473033495307388 0.9683729341884957 0.10337711777245806 0.15139726362861652 1.2911173165868703 2.007882750484997 0.030094524066595532 0.07999996314904313 7.381039321746972e-08 7.1318824810063095 0.12106958465775686 S(ph)AANIR ddPTM_A549_MK2206_60min_R1 3 SAANIR 6 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 S(1)AANIR;S(1)AANIR;S(1)AANIR 101.54 0.032158 31749700.0 5559.700000000001 5865.299999999999 4936.1 4591.1 8114.7 6490.8 4900.83 5917.0 8995.4 8842.6 8949.2 True False 6498.041438385374 6163.81871727815 5636.113203579429 5715.91970610231 6921.038379478094 7177.652147755662 5791.247373628963 6755.75287005252 6957.956262702041 6845.050518547587 6726.866654644998 0.9659833875104962 0.9162986325917349 0.8378511858396379 0.849715030720192 1.0288651068620511 1.0670126994117521 0.8609130626411368 1.0042941560893845 1.0343532315892532 1.0175689321596677 1.0 12.715718944854679 -6.7673895557506025 24.999861101886616 1.0083429499365166 0.8902638908183024 0.4473275684844944 0.05819175793033931 93.86844290895937 394393.1907289163 0.008455959157988547 0.016283154452387632 1.708482144269662e-07 6.7673895557506025 -0.11807905911821426 S(ph)AANIR ddPTM_A549_PD325901_60min_R1 2 SAANIR 6 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 S(1)AANIR;S(1)AANIR 97.431 0.034582 20025900.0 3392.8 3247.8999999999996 3518.0 3266.4 3528.3 3432.6000000000004 3435.04 3631.2 3494.3 4063.2000000000003 4191.9 True False 3737.234558352651 3521.611931506039 3756.7526354525558 3468.158109467364 3280.4843799742084 3404.6460436749016 3565.762326926015 3558.7728673787055 3347.4467227555765 3806.6488585699517 3676.322874643487 1.0165686436654646 0.9579169326490533 1.0218777739473899 0.943376908864048 0.8923276033779636 0.9261009328526588 0.9699263227177254 0.9680251133338823 0.9105420924380034 1.0354500919452303 1.0 11.844047762168094 -6.2786064136479505 24.513350177539934 0.9508108611429757 0.9947006999509295 0.17039279666342022 0.04103508296211905 764.7639858267544 1092029.6303214529 0.0056850858414383984 0.013243892800272685 5.264941940689538e-07 6.2786064136479505 0.04388983880795372 S(ph)AAPPGDPAR ddPTM_A549_PD325901_60min_R1 1 SAAPPGDPAR 10 0 K7EJU9 K7EJU9 JMJD6 1 S(1)AAPPGDPAR 50.353 0.027341000000000004 42370000.0 2741.9 3116.0 3976.9 2856.1 3836.1 2391.1 3574.4 3214.1 3530.2 3586.8 3335.9 True False 3020.2556695199055 3378.596255602951 4246.796349042431 3032.5148103262745 3566.6655698265636 2371.627674366679 3710.4257479867315 3149.992254087328 3381.83797060119 3360.328835872883 2925.605448012405 1.0323523534493704 1.1548366024196115 1.4515957207858003 1.0365426453476498 1.2191204976903778 0.8106450840723971 1.2682591053101562 1.0766975622865915 1.1559446516955114 1.1485926231631198 1.0 11.514519503018526 -14.999999999755389 0.21324964361437374 0.300403733520802 1.1615679127415794 0.0 0.158244505499379 79.19821419415908 0.9608672820150735 23.27268732524145 0.1070444500530235 1.0000000005632387e-15 14.999999999755389 0.8611641792207774 S(ph)AASQTADGSGCR ddPTM_A549_PD325901_60min_R1 2 SAASQTADGSGCR 13 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 S(1)AASQTADGSGCR;S(0.996)AAS(0.002)QT(0.001)ADGS(0.001)GCR 81.431 0.00060838 3475000.0 550.95 484.67 786.4200000000001 650.74 647.95 626.69 789.94 666.29 398.17 484.47 575.88 True False 606.882038412047 525.514841849513 839.791190327629 690.9347318622317 602.4402273061503 621.5864444184077 820.0015989717541 653.0003232556066 381.4362995734731 453.8804815198328 505.0504108040958 1.201626660288869 1.0405195810311996 1.6627868671378547 1.3680510243763344 1.192831872658017 1.2307413896145014 1.6236034689412913 1.2929408813190713 0.7552440140899689 0.8986835211107049 1.0 8.9802835851389 -8.715147318136172 8.098472559138129 0.8845469249946579 1.3328741986024797 0.5428169260307758 0.18064058392518761 0.1396738003803992 21.575428336843203 0.032268712016997374 0.036487353800728886 1.92687118344391e-09 8.715147318136172 0.44832727360782176 S(ph)AASREDLVGPEVGASPQSGRK ddPTM_A549_MK2206_60min_R1 1 SAASREDLVGPEVGASPQSGRK 22 2 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.521)AAS(0.478)REDLVGPEVGASPQSGRK 52.32899999999999 0.0018480999999999999 7932100.0 1983.7 2145.9 1660.7 1876.8 2409.2 1809.7 2395.5 2215.4 3320.1 3536.1 2876.9 True False 2318.5000631913713 2255.117144120027 1896.2122317587489 2336.616084252753 2054.809871447943 2001.2012528183632 2830.7313421457534 2529.439734377956 2568.1026511102395 2737.292554071892 2162.486331599271 1.0721455341993862 1.0428353285600889 0.8768666899995624 1.0805229379298336 0.9502071025476976 0.9254168331960604 1.3090169869662391 1.1696905073648738 1.1875694257965526 1.265808025730975 1.0 11.078475298615487 S(ph)ADGSAPAGEGEGVTLQR ddPTM_A549_MK2206_60min_R1 2 SADGSAPAGEGEGVTLQR 18 0 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 1 S(0.999)ADGS(0.001)APAGEGEGVTLQR;S(0.999)ADGS(0.001)APAGEGEGVTLQR 282.85 4.468699999999999e-116 100187000.0 6775.7 6625.4 5884.299999999999 5618.5 8474.7 5445.7 5944.0 6435.9 9764.2 9329.0 9706.099999999999 True False 7919.272510039706 6962.604560628559 6718.782221555974 6995.032752224052 7228.082856367209 6021.960359436899 7023.947859617761 7348.208534117122 7552.624290223367 7221.572420728116 7295.807495267707 1.0854552446972316 0.9543295331112732 0.9209100193383651 0.9587743038397399 0.9907173210169777 0.8254001168949338 0.9627375536119501 1.0071823494360843 1.0352005991279567 0.9898249680261243 1.0 12.832851948198927 -8.260277742763174 4.656710090996383 1.0166186594979625 0.9514156672719432 0.14230711648018435 0.058636630243952916 0.22947896471140825 13.912298274702128 0.009304412025152661 0.011700850878956032 5.491895403459875e-09 8.260277742763174 -0.06520299222601933 S(ph)ADLAR ddPTM_A549_PD325901_60min_R1 1 SADLAR 6 0 Q96S38-2;Q96S38 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 S(1)ADLAR 65.803 0.056842 15984000.0 1754.0 1492.3 1687.7 1419.1 1603.5 1386.7 1058.9 1190.5 1652.6 2152.5 2243.0 True False 1932.0647887734447 1618.0613582273054 1802.237470964549 1506.7545839900608 1490.8756917746928 1375.4071749589195 1099.1970189523136 1166.7545435708173 1583.1469690713063 2016.590782652053 1967.1252195484944 0.9821768180151251 0.8225512754082284 0.9161783159783842 0.7659678036845563 0.7578956728117627 0.6991965540834307 0.5587834511138072 0.5931267272546165 0.8048023345634697 1.0251461181077797 1.0 10.941873081562546 -10.095192696436094 1.0232107207037333 0.9778281331137142 0.763149721447812 0.37749503603597123 0.11907384405912705 0.42138042209884724 0.8844811284125069 0.04876741224336401 0.024403262932941983 8.031696767756844e-11 10.095192696436094 -0.21467841166590218 S(ph)ADLPHSFK ddPTM_A549_MK2206_60min_R1 1 SADLPHSFK 9 0 F8W1R0;B7Z493;E9PJX4;F8VWL3;Q96M96 F8W1R0 FGD4 FYVE, RhoGEF and PH domain-containing protein 4 1 S(0.999)ADLPHS(0.001)FK 57.019 0.0044146 2373000.0 293.79 327.41 299.52 174.98 821.77 382.01 390.5 451.99 593.56 444.05 548.69 True False 343.3745695241178 344.073770518821 341.99643984848586 217.8501078551506 700.8887215921361 422.43404464228485 461.4487952861268 516.0609666613215 459.1196077205487 343.7387965938815 412.4351299263805 0.8325541269615176 0.8342494262800504 0.8292126810573388 0.528204539448511 1.6993914211848162 1.0242436058191482 1.1188396957565065 1.2512536620084669 1.1131922923309208 0.8334372405552328 1.0 8.688023411937724 S(ph)ADNT(ph)LERR ddPTM_A549_PD325901_60min_R1 1 SADNTLERR 9 1 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 2 S(1)ADNT(1)LERR 46.88 0.014907 2814100.0 295.23 111.01 247.41 227.92 251.57 237.95 222.45 128.58 328.95 129.16 292.7 True False 325.20153226316114 120.36520228962887 264.20073039719074 241.99810075612334 233.90059106938529 236.0122140920711 230.91545647931068 126.01537103094132 315.1253754544391 121.00481555741648 256.69975557817406 1.2668556365809467 0.4688948846816235 1.0292208101333091 0.9427282087240884 0.9111835363557811 0.9194095785580019 0.8995546410210307 0.4909056915426833 1.2276029431530657 0.4713865632044448 1.0 8.003938111997662 S(ph)ADNTLER ddPTM_A549_MK2206_60min_R1 2 SADNTLER 8 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 S(1)ADNTLER;S(0.999)ADNT(0.001)LER 70.028 0.0067896 15748200.0 763.15 831.31 851.3900000000001 755.2 1119.87 952.88 850.8299999999999 975.44 1285.64 1182.4 1093.35 True False 891.9510627738537 873.6201281879021 972.1299042554837 940.2240339022163 955.138606482818 1053.7131291294477 1005.414797678093 1113.7116071597152 994.44459274521 915.2950187875359 821.841020075102 1.0853085219478882 1.063003801036931 1.1828685603532516 1.144046124415031 1.1621938831862333 1.2821374248673503 1.223368964457646 1.3551423936687186 1.2100206347139195 1.113712988801525 1.0 9.682715530479864 -10.617617159723935 1.0166035600467287 1.0055549899901282 1.1909576565980151 0.23675669944138789 0.08440710365581579 0.40062935184409193 0.7691493915543424 0.04969136806005906 0.015206687525329391 2.4120307507151625e-11 10.617617159723935 0.18540266660788696 S(ph)ADNTLER ddPTM_A549_PD325901_60min_R1 1 SADNTLER 8 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 S(1)ADNTLER 94.76700000000001 0.0025266999999999998 12370000.0 843.97 833.0 846.03 606.3 757.22 644.88 767.88 708.71 778.98 927.88 704.59 True False 929.6492131021236 903.1998334137547 903.4466833916791 643.7497739927944 704.035479467186 639.6283110892829 797.102093600059 694.5742230777604 746.2421795759204 869.2934984470086 617.9298967640099 1.504457411707271 1.461654207287353 1.4620536862237454 1.041784476465694 1.1393452285673438 1.0351146860491842 1.2899555398991736 1.1240340153715225 1.2076486078499509 1.4067833632898257 1.0 9.271299365561896 -6.253165079743828 24.024806620874983 1.111014753818435 1.4746150812104075 0.5749510839385337 0.11828446753023063 134.29314309403352 389923.90251996444 0.013075899139707511 0.03393592826249385 5.582579548830836e-07 6.253165079743828 0.36360032739197257 S(ph)AEEGELAESK ddPTM_A549_MK2206_60min_R1 2 SAEEGELAESK 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)AEEGELAESK;S(1)AEEGELAESK 190.1 5.3898e-19 77862000.0 4001.7999999999997 3897.6000000000004 3145.1000000000004 3093.8 4359.5 3354.4 3340.0 3894.4 4202.3 3404.2 3647.0 True False 4677.206005383485 4095.9711920043896 3591.122472514267 3851.7811388859595 3718.2233249947285 3709.360381529489 3946.8347663397294 4446.443126099803 3250.4857596941547 2635.1888556804183 2741.3492479205197 1.7061693284543844 1.494144241238665 1.3099835693092925 1.4050676475490198 1.356347910728714 1.3531148518720353 1.4397416780563965 1.6219907512596947 1.1857247894115812 0.9612744008007624 1.0 11.420670423896858 -8.975169909799513 3.6375499824961213 1.0757743887810423 1.4471202150404578 0.696055255470871 0.12157529119778805 0.10092409397116807 2.6941431713055466 0.02304622964575526 0.02360655531294803 1.0588393925212407e-09 8.975169909799513 0.3713458262594156 S(ph)AEEGELAESK ddPTM_A549_PD325901_60min_R1 2 SAEEGELAESK 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)AEEGELAESK;S(1)AEEGELAESK 178.15 1.1994000000000001e-15 65672000.0 3653.5 3961.3 3715.0 3576.2 4004.7000000000003 3458.6 3647.8999999999996 4363.9 3917.1000000000004 4920.0 5374.8 True False 4024.4006304354507 4295.132653183559 3967.1222401097925 3797.0937518605133 3723.423687464986 3430.4343082951773 3786.7228307074743 4276.858591086676 3752.477909082183 4609.350360347546 4713.733673664404 0.853760714764126 0.9111954451691734 0.8416093302585329 0.8055384573538485 0.7899096438705749 0.7277531031209907 0.8033383073515306 0.9073186749988559 0.7960733823481055 0.9778554919426087 1.0 12.202654533165767 -10.81361581462467 0.8001275841791888 1.0136797732040772 0.8236981291969713 0.6050353453459274 0.05056281753793309 0.434255024083959 0.4327790235629829 0.05403427926990078 0.010097385055847808 1.535975135570866e-11 10.81361581462467 -0.18998164400710593 S(ph)AEEVEEIKAEK ddPTM_A549_MK2206_60min_R1 2 SAEEVEEIKAEK 12 1 Q8WUA2 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 1 S(1)AEEVEEIKAEK;S(1)AEEVEEIKAEK 61.375 0.0022822 5023600.0 1867.3600000000001 1793.61 1890.38 1556.91 2502.3 1966.94 1806.42 2201.3 2853.1 2484.6000000000004 2176.7 True False 2182.5247154312824 1884.897087872277 2158.464309431027 1938.3530198923452 2134.2149847767664 2175.0802852508973 2134.6231313207822 2513.3410161985157 2206.8774054644814 1923.3271343703573 1636.165316136165 1.3339267700560695 1.1520211737060266 1.3192214063847048 1.1846926473602326 1.3044005784310078 1.3293768446255725 1.3046500315516616 1.5361167917517147 1.348810773397925 1.1755090487508502 1.0 10.67610280844328 -10.665351079624255 0.9926432687769229 1.0046087910597532 1.3100868167160693 0.3713237412720234 0.10487363858618845 0.2976897165078936 0.5338978959065445 0.06166559671683966 0.017430617486085574 2.1609709086387593e-11 10.665351079624255 0.3054780256563161 S(ph)AEPRPELGPGQETGTNSR ddPTM_A549_MK2206_60min_R1 2 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(1)AEPRPELGPGQETGTNSR;S(1)AEPRPELGPGQETGTNSR 80.293 7.3134e-05 20503500.0 1028.17 1298.2199999999998 1182.82 1066.4299999999998 1329.3600000000001 1054.04 1395.17 1301.33 1646.43 1419.9099999999999 1885.58 True False 1201.6999596569399 1364.293852854048 1350.5616619310429 1327.7053978738625 1133.8129049925442 1165.5778131848735 1648.654329627004 1485.7975126559818 1273.5162338084497 1099.1513448296764 1417.338446639421 0.8478567433955027 0.9625745044092014 0.9528857875359911 0.9367596010832255 0.7999591824245439 0.8223708430040234 1.1632044086125262 1.0483011423128192 0.8985265564678777 0.7755037954666497 1.0 10.468968585603948 S(ph)AEPRPELGPGQETGTNSR ddPTM_A549_PD325901_60min_R1 2 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(1)AEPRPELGPGQETGTNSR;S(1)AEPRPELGPGQETGTNSR 105.16 4.5807e-10 25365000.0 1246.22 1668.6 1353.1399999999999 1561.68 1321.53 1712.35 1207.81 1359.8400000000001 1598.97 1542.33 1386.85 True False 1372.7353369813256 1809.2187779522096 1444.9722174918334 1658.1414267673872 1228.7102918310006 1698.4051893278336 1253.7738704889919 1332.7169244261577 1531.770851467957 1444.947020584315 1216.276241966487 1.1286377959351357 1.4875064689474222 1.188029633100116 1.3632934440012479 1.0102230475573626 1.3963975704909237 1.030829861859242 1.0957353917161188 1.259393876666846 1.1880089166652723 1.0 10.248255217106495 -14.999999999999991 0.17874654325071382 0.08219128882947736 1.2809941575112007 0.07400937440787458 0.15133598490222244 50.514599603042655 0.5587900109002276 16.399438658316182 0.1554307361731798 1.0000000000000204e-15 14.999999999999991 1.1988028686817234 S(ph)AEVDDGAAEKETLPEFGEGK ddPTM_A549_MK2206_60min_R1 2 SAEVDDGAAEKETLPEFGEGK 21 1 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 S(1)AEVDDGAAEKETLPEFGEGK;S(1)AEVDDGAAEKETLPEFGEGK 158.2 4.7094e-28 9082100.0 4060.0 4451.7 4314.5 4275.6 5748.9 4552.700000000001 4447.9 5000.4 6405.0 6470.200000000001 6366.9 True False 4745.228742530101 4678.272515251933 4926.360976650283 5323.122191938978 4903.244425521779 5034.463692162323 5256.025855449841 5709.222013082748 4954.277726683257 5008.577326250943 4785.823012499355 0.9915178079374787 0.9775272723277633 1.0293654746077903 1.1122689196897448 1.0245352602291704 1.0519535885496771 1.0982491081936034 1.192944661382527 1.0351986928358907 1.0465446200517257 1.0 12.22455132932144 -5.854402571044835 5.048056731336353 1.0443966592626346 0.984816438947032 0.17569221616713682 0.05413732954742366 0.31979202026514253 13.303561922560878 0.008594253507837414 0.02840708149432661 1.3982905704919276e-06 5.854402571044835 -0.05958022031560262 S(ph)AFLSQR ddPTM_A549_MK2206_60min_R1 2 SAFLSQR 7 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(1)AFLSQR;S(0.994)AFLS(0.006)QR 83.99799999999999 0.014256 12388400.0 3314.0 2925.1000000000004 2862.8 3587.1 4233.1 3049.7 2944.8 2847.8 4804.6 4540.7 4412.4 True False 3873.3221804790046 3073.975095887735 3268.7880876009785 4465.939661031035 3610.4165975536625 3372.4172297729774 3479.8320418913877 3251.4843710217306 3716.365771369618 3514.952716346889 3316.679303955167 1.1678313835950422 0.9268231306602343 0.9855604922981013 1.3465093401419201 1.0885636706715092 1.0168053407368456 1.0491915928506141 0.9803433111981339 1.120508023473304 1.0597807005806317 1.0 11.695523806597835 -7.0195684152799425 24.500083449931946 1.0488613776389346 1.1017268164362355 0.08322240454344842 0.10519961266068376 1591.7284517817052 1992879.1606305172 0.0159946668240519 0.02796240531983031 9.559420916845509e-08 7.0195684152799425 0.05286543879730088 S(ph)AFLSQR ddPTM_A549_PD325901_60min_R1 2 SAFLSQR 7 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(1)AFLSQR;S(0.999)AFLS(0.001)QR 92.051 0.012325 17336000.0 3704.3 3967.2 4039.1000000000004 3949.6000000000004 4524.299999999999 3997.5 4483.2 4650.7 4820.9 4951.3 4560.2 True False 4080.3578090384717 4301.529866889613 4313.217615081418 4193.557821807588 4206.528775987676 3964.9456853669003 4653.810629301172 4557.9381400964285 4618.294338131345 4638.674073005856 3999.3243094895447 1.0202617975633164 1.0755641538454381 1.0784865845580645 1.048566582074169 1.0518098684836534 0.99140389189217 1.1636492240098337 1.139677052266407 1.154768651087664 1.159864445601291 1.0 11.96554056023907 -7.741914851607986 24.99995506892974 1.0871702844817694 1.047850291994545 0.24721166297829378 0.053706946841532856 550.513189622656 704896.568825248 0.010391985264381917 0.015401092956035476 1.811695261343205e-08 7.741914851607986 -0.03931999248722451 S(ph)AGEEEDGPVLTDEQK ddPTM_A549_MK2206_60min_R1 3 SAGEEEDGPVLTDEQK 16 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F5H7X4;Q66PJ3-7;Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2 H7BZV4;Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK 270.51 1.2609999999999997e-91 362807000.0 3130.2400000000002 3778.15 3993.1700000000005 3507.99 5224.860000000001 4116.75 3696.96 4067.25 6005.879999999999 5361.31 6473.57 True False 3658.54798497966 3970.4416972165877 4559.461550847283 4367.447707479657 4456.290015330192 4552.381752522516 4368.649777774647 4643.795142930726 4645.557769419585 4150.186347408492 4866.003907557124 0.7518588259449956 0.8159553039097055 0.9370032654035139 0.8975429922480772 0.9158007473872702 0.9355483141829092 0.8977900266356007 0.9543344459133504 0.9546966787685526 0.8528941666000442 1.0 12.24852176346926 -2.763602620766576 0.2622419474800055 0.9868432645975431 9.63085825231319e-22 0.47558898643952663 0.04884710493921052 9.131197799651462 0.16045159971839384 0.013342168594132401 3.7886970191429494 0.0017234448048845292 2.763602620766576 -0.9868432645975431 S(ph)AGEEEDGPVLTDEQK ddPTM_A549_PD325901_60min_R1 3 SAGEEEDGPVLTDEQK 16 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F5H7X4;Q66PJ3-7;Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2 H7BZV4;Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK 278.4 7.171499999999998e-107 499260000.0 2959.7 3108.5200000000004 3411.0 3082.39 3305.9 2903.8 3161.9 3961.3 3573.6000000000004 3182.5 3466.12 True False 3260.1665651840176 3370.485889751891 3642.490972009288 3272.782229684393 3073.704988735861 2880.1524155518205 3282.2278347580695 3882.2887639202672 3423.4140195287564 2981.5564068711533 3039.8092135449992 1.0724905203448738 1.1087820494567353 1.1982630211721237 1.0766406704411895 1.0111506258484337 0.9474780202383201 1.0797479723835575 1.2771488245450693 1.1261937111955789 0.9808366898770229 1.0 11.569765063821105 -10.788705575050363 1.1600583303374492 1.0026305057985199 1.1007586778975422 0.2005322964287296 0.08283895040137279 0.7220714863920976 1.7943498013348653 0.05329765986574229 0.01494407422216618 1.6266511514717273e-11 10.788705575050363 0.09812817209902236 S(ph)AGQGEVLVYVEDPAGHQEEAK ddPTM_A549_MK2206_60min_R1 2 SAGQGEVLVYVEDPAGHQEEAK 22 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 1 S(1)AGQGEVLVYVEDPAGHQEEAK;S(1)AGQGEVLVYVEDPAGHQEEAK 121.1 1.0375e-15 3485000.0 1228.33 1528.1799999999998 1395.45 1090.6799999999998 2115.5 1659.37 1258.3000000000002 1621.4 2250.7 2287.0 2408.0 True False 1435.6420742147784 1605.9578346154724 1593.345793224391 1357.8966489624859 1804.3127523859043 1834.9634319993404 1486.9168223009824 1851.2384153292483 1740.9200436293543 1770.3651116095168 1810.0271425809176 0.7931605225365275 0.8872562166805616 0.8802883425010076 0.7502078930298587 0.9968429256884705 1.0137767488850284 0.8214886878330386 1.022768317545541 0.961819854892881 0.9780876043025263 1.0 10.821795616320447 -6.295363817464488 0.343889214817194 0.9936658098330856 0.758527826440675 0.3991050001546341 0.07167207370486708 2.521897561222381 0.3368156571587639 0.02448425250247197 0.22286010397183761 5.065661695260021e-07 6.295363817464488 -0.23513798339241065 S(ph)AHEEEEDDDDDDQGEDK ddPTM_A549_MK2206_60min_R1 1 SAHEEEEDDDDDDQGEDK 18 0 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 S(1)AHEEEEDDDDDDQGEDK 75.358 0.00015141 1427500.0 159.56 223.06 179.33 101.69 192.03 214.69 265.56 171.67 156.91 258.77 262.2 True False 186.48982713253773 234.41280123370757 204.7616905650007 126.60405456503759 163.78264138060277 237.40835330031177 313.8088145356821 196.00474821732578 121.37013553378145 200.3136772764297 197.0885036481381 0.9462237709484964 1.1893783599484042 1.0389326966049808 0.6423715854632682 0.8310106289761261 1.204577379734724 1.5922228274457075 0.9945011737835955 0.6158153991085316 1.016364088054824 1.0 7.622699814895137 -8.539120379530104 24.458658214639474 0.8178730738298022 1.0652552268703959 0.08451934472797318 0.24761971197381646 269.75802699258065 406232.9419094532 0.04629330187623176 0.05249951483941286 2.8898787428672964e-09 8.539120379530104 0.24738215304059363 S(ph)AHEEEEDDDDDDQGEDK ddPTM_A549_PD325901_60min_R1 2 SAHEEEEDDDDDDQGEDK 18 0 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 S(1)AHEEEEDDDDDDQGEDK;S(1)AHEEEEDDDDDDQGEDK 160.13 2.897e-23 4093100.0 816.99 830.8199999999999 765.94 678.66 995.44 775.18 503.05 469.67 963.09 906.9499999999999 852.1500000000001 True False 899.9302233637504 900.836117163044 817.9212943713851 720.5792868513106 925.5237284815706 768.8671910901099 522.1938430295224 460.30206340101256 922.6146765356915 849.6850222189449 747.3409522239191 1.204176247381814 1.2053884033550655 1.0944419570979413 0.9641908217487991 1.2384223368563165 1.0288037726316663 0.6987357530396142 0.6159197646419039 1.2345298003410587 1.1369442818441473 1.0 9.545622769951759 -5.8638344981393775 3.7293229009115008 1.0431911370258455 1.2064403120940879 0.12128107955589462 0.18909842715312183 0.4600860788411503 12.031775421385301 0.029405764515550534 0.1054069830866181 1.3682501419182248e-06 5.8638344981393775 0.16324917506824232 S(ph)AHEEEEDDDDDDQGEDKK ddPTM_A549_MK2206_60min_R1 2 SAHEEEEDDDDDDQGEDKK 19 1 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 S(1)AHEEEEDDDDDDQGEDKK;S(1)AHEEEEDDDDDDQGEDKK 71.527 0.00036344 4473400.0 1199.73 1570.3899999999999 1424.0 903.6000000000001 1562.1100000000001 1227.37 919.63 1204.33 914.88 2028.03 2030.43 True False 1402.2150934176457 1650.316143321986 1625.944612527525 1124.9820405641458 1332.325688314604 1357.2494787377323 1086.7148671164684 1375.0474656059412 707.661140763151 1569.8966144719934 1526.2181939827967 0.9187513940968334 1.0813107521771477 1.0653421764580617 0.7371043308220623 0.8729588557962255 0.8892892799265313 0.7120311311979536 0.900950775601513 0.46366970565096516 1.0286187261175377 1.0 10.5757455147731 -6.465892631587295 1.090477580949442 0.7592554462051387 1.0356281825531197 0.09083214649508131 0.16649639861414367 0.6820448488848395 1.4758108359670332 0.031726688610174206 0.13082766491040915 3.4206399880120707e-07 6.465892631587295 0.276372736347981 S(ph)AHEEEEDDDDDDQGEDKK ddPTM_A549_PD325901_60min_R1 2 SAHEEEEDDDDDDQGEDKK 19 1 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 S(1)AHEEEEDDDDDDQGEDKK;S(1)AHEEEEDDDDDDQGEDKK 87.156 2.8802e-06 7072700.0 1366.0 1575.56 1553.5700000000002 1061.73 2026.76 1141.08 1332.97 611.91 1371.29 1664.46 1376.1399999999999 True False 1504.6753144039487 1708.3379706283013 1659.0046025753354 1127.3106507362181 1884.4073695424227 1131.787422803868 1383.6969027791715 599.7049750158915 1313.6594500894298 1559.365711541479 1206.8835040702036 1.2467444532379846 1.4154953356035997 1.3746186744456756 0.9340674944469564 1.561382986168322 0.9377768599760666 1.14650411420213 0.4969037798539726 1.0884724545982485 1.2920598436241215 1.0 10.237070709544225 -7.290903324134837 24.939787436824762 0.9995722048727577 1.2956171835270858 0.3087203975367726 0.23274760252538185 612.1032308199163 518114.03520018246 0.03089113848697344 0.049387588381727306 5.117957508499113e-08 7.290903324134837 0.2960449786543281 S(ph)AHEEEEDDDDDDQGEDKKSPWQK ddPTM_A549_MK2206_60min_R1 1 SAHEEEEDDDDDDQGEDKKSPWQK 24 2 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 S(1)AHEEEEDDDDDDQGEDKKSPWQK 84.365 1.4314e-06 4237200.0 749.52 866.81 912.77 609.34 1136.0 1089.7 691.79 774.51 1603.9 1046.6 1378.1 True False 876.0206519953605 910.9269265551422 1042.2145112196265 758.6283273543123 968.8959048500999 1205.0113307156828 817.4792883251974 884.2991643373966 1240.6192109019953 810.1723331047316 1035.8797363749018 0.845677950088131 0.8793751770287193 1.0061153574322184 0.7323517399897784 0.9353362855043249 1.163273388214604 0.7891642819329544 0.85366971983836 1.1976479192879925 0.7821104175084636 1.0 10.016640803316996 -8.75125321717485 24.99999999977121 1.0933337425563188 0.9040169208211573 0.0 0.14902016886839903 178.09170175937751 437091.93347843183 0.021216106940430322 0.023923513787047202 1.7731553339642647e-09 8.75125321717485 -0.1893168217351615 S(ph)AHEEEEDDDDDDQGEDKKSPWQK ddPTM_A549_PD325901_60min_R1 1 SAHEEEEDDDDDDQGEDKKSPWQK 24 2 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 S(1)AHEEEEDDDDDDQGEDKKSPWQK 96.887 1.9193e-08 6390500.0 1067.7 1025.4 1003.4 844.17 901.59 1196.1 1030.3 389.58 985.5 1230.2 1569.3 True False 1176.092118000803 1111.8140566416128 1071.496757934365 896.3124636508282 838.2654287166478 1186.359358165691 1069.5086303017933 381.8095212804025 944.082862168566 1152.524962052755 1376.2860486123293 0.8545404635806807 0.8078364652192934 0.7785421926021303 0.6512544863435584 0.6090779090305009 0.8620005698392889 0.7770976327051698 0.2774201785053117 0.6859641301460974 0.8374167297669068 1.0 10.426564636988065 -10.534720731674415 1.0289554067048652 0.986633205010179 0.7003532726229027 0.19408279491501135 0.16115385489002987 0.45508292034451225 0.9145187244563294 0.08431681828588757 0.0286110403628797 2.919303636900513e-11 10.534720731674415 -0.28627993238727634 S(ph)ALEDKERDEDDEDGDGDGDGATGK ddPTM_A549_MK2206_60min_R1 3 SALEDKERDEDDEDGDGDGDGATGK 25 2 F8VQZ7;G3V1U3;P50579-3;P50579 F8VQZ7;G3V1U3 METAP2 Methionine aminopeptidase 2 1 S(1)ALEDKERDEDDEDGDGDGDGATGK;S(1)ALEDKERDEDDEDGDGDGDGATGK;S(1)ALEDKERDEDDEDGDGDGDGATGK 255.83 9.845799999999997e-125 88294000.0 6913.1 8253.3 6543.4 6390.299999999999 9954.0 8356.7 7514.4 8112.799999999999 11426.1 11304.4 11501.5 True False 8079.862270932233 8673.357717305475 7471.352512368399 7955.923786871467 8489.779785984068 9241.00044727149 8879.669212030907 9262.814244407991 8838.106593732338 8750.728188753228 8645.36012474852 0.9345894392302441 1.003238453014445 0.8642037352476082 0.9202536010150175 0.9820041806796362 1.0688971094238016 1.0271022934731944 1.0714202891203948 1.022294787747714 1.0121878166420248 1.0 13.077710345622489 -6.954903289721784 4.5998761628148355 1.0211001341140238 0.9318449704415587 0.6169617230201118 0.03724678151235534 0.12040632240842995 5.660279005817344 0.005593104754777123 0.010671850324485933 1.1094218378560854e-07 6.954903289721784 -0.08925516367246511 S(ph)ALEDKERDEDDEDGDGDGDGATGK ddPTM_A549_PD325901_60min_R1 4 SALEDKERDEDDEDGDGDGDGATGK 25 2 F8VQZ7;G3V1U3;P50579-3;P50579 F8VQZ7;G3V1U3 METAP2 Methionine aminopeptidase 2 1 S(1)ALEDKERDEDDEDGDGDGDGATGK;S(1)ALEDKERDEDDEDGDGDGDGATGK;S(0.999)ALEDKERDEDDEDGDGDGDGAT(0.001)GK;S(1)ALEDKERDEDDEDGDGDGDGATGK 355.32 4.818999999999998e-258 215260000.0 31992.2 32501.9 32571.0 29749.7 39810.2 28818.0 31662.9 34269.3 33219.2 36561.3 37542.6 True False 35240.024592587135 35240.94917842799 34781.46392533407 31587.271402529146 37014.06888973424 28583.31576257744 32867.8489861037 33585.771927754235 31823.112546879787 34252.81327840951 32925.09820214953 1.0703088682142936 1.070336949705051 1.0563814787062153 0.9593675684304248 1.1241900832756746 0.8681315265055569 0.9982612286926424 1.0200659606707436 0.9665305279120535 1.040325318640152 1.0 15.006900123009002 -6.255456963609391 0.9111638797957449 0.9839467491761047 1.0813092245865863 0.18516702087826642 0.05958923983311035 0.7658668145993778 1.0008198218721118 0.008345081860975287 0.05230098705351683 5.553196437662377e-07 6.255456963609391 0.0973624754104816 S(ph)ALEDKERDEDDEDGDGDGDGATGKK ddPTM_A549_MK2206_60min_R1 1 SALEDKERDEDDEDGDGDGDGATGKK 26 3 F8VQZ7;G3V1U3;P50579-3;P50579 F8VQZ7;G3V1U3 METAP2 Methionine aminopeptidase 2 1 S(1)ALEDKERDEDDEDGDGDGDGATGKK 165.49 9.2351e-42 15914000.0 3179.9 3579.9 2867.7 2731.8 5281.0 3481.8 2237.7 3547.7 5846.4 5377.9 5116.2 True False 3716.5893789092315 3762.101619010802 3274.3829812817276 3401.0911226351627 4504.171895698396 3850.2417649682134 2644.261124742039 4050.597339375584 4522.199734782361 4163.028654886236 3845.7063400633256 0.966425683675065 0.9782602430711995 0.8514386413674555 0.88438659166554 1.1712209662956812 1.0011793476942425 0.6875878943732603 1.053277858784424 1.1759087498885563 1.082513402418991 1.0 11.909032886677016 -8.50016088837137 24.921297158508228 1.0847272607983118 0.9374589166093058 0.26265122966300836 0.11652474262097526 823.7676237286813 903667.7430255486 0.020615355656814632 0.0248268076656395 3.1611063823938335e-09 8.50016088837137 -0.14726834418900603 S(ph)ALSPSK ddPTM_A549_MK2206_60min_R1 1 SALSPSK 7 0 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 S(0.839)ALS(0.143)PS(0.018)K 71.708 0.020311000000000003 45657000.0 7611.8 8861.2 8011.6 7867.1 10648.0 8271.3 7390.0 8597.5 10777.0 11716.0 10585.0 True False 8896.4857493573 9312.197230754638 9147.765349526346 9794.539853167536 9081.693305320303 9146.563475955423 8732.66734229059 9816.221953739485 8336.026707332632 9069.347462884612 7956.452368861721 1.1181473019526242 1.1703956485931777 1.1497291663966887 1.2310184739494368 1.1414249572915578 1.1495781099314195 1.097557923738305 1.2337435704581274 1.0477064803349303 1.1398732805060587 1.0 12.957909588455697 -8.906183607305067 6.0533274043193765 1.0207206175681185 1.1603077511418098 0.34655943685325896 0.05353449363075925 0.07835393689996037 4.142761014553806 0.006896781271013354 0.00729516824348792 1.241127483402023e-09 8.906183607305067 0.13958713357369135 S(ph)AMPLR ddPTM_A549_MK2206_60min_R1 2 SAMPLR 6 0 F5H385;Q9BRY0 F5H385 SLC39A3 Zinc transporter ZIP3 1 S(1)AMPLR;S(1)AMPLR 51.787 0.032688 17834600.0 1279.44 888.03 714.13 485.1 1939.92 1149.69 1085.6399999999999 1213.5 1658.57 1391.0900000000001 1531.85 True False 1495.3781926952506 933.2269339171941 815.4043722923324 603.9495217769668 1654.560337796484 1271.3494326975429 1282.8867352482223 1385.517341187888 1282.9065431920453 1076.8418028460358 1151.4493680907715 1.2986920954889667 0.8104802171758416 0.7081547785677816 0.5245124436330022 1.4369371191196407 1.10412968900715 1.1141494978414799 1.2032811685721159 1.1141667004596512 0.9352055180954737 1.0 10.169235258528111 -6.7563413308727815 24.99999535460531 1.0971548683419077 0.8245824854074023 0.3017962734899866 0.21139900310027468 128.39084646915992 629600.1874097553 0.029047367609020252 0.05904887012464049 1.7525025926232427e-07 6.7563413308727815 -0.27257238293450536 S(ph)AMPLR ddPTM_A549_PD325901_60min_R1 2 SAMPLR 6 0 F5H385;Q9BRY0 F5H385 SLC39A3 Zinc transporter ZIP3 1 S(1)AMPLR;S(1)AMPLR 58.193999999999996 0.02496 22183100.0 2749.3 2398.8 2139.3 2297.98 1977.5700000000002 2440.1 1950.71 1684.29 2648.1 2535.3 2784.0 True False 3028.406912072313 2600.955294589333 2284.4857626559574 2439.9210055087606 1838.672305446136 2420.228634612578 2024.9453365194706 1650.6955146500557 2536.8095660158083 2375.2207253229953 2441.585649230055 1.2403443282963715 1.065273010352733 0.9356566145350509 0.99931821203085 0.7530648396569478 0.991252809573069 0.8293566671142705 0.6760752034935151 1.0390008504578907 0.9728189244854107 1.0 11.253602672325004 -5.370956363320026 2.318262606246735 0.9583154432446328 1.2752043719719806 0.3741740844353627 0.1170939668111938 0.44296019095353284 3.2950115969988314 0.017959011900268895 0.2554745894023936 4.256411782057679e-06 5.370956363320026 0.31688892872734775 S(ph)APAS(ph)PT(ph)HPGLMSPR ddPTM_A549_PD325901_60min_R1 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 3 S(0.978)APAS(0.924)PT(0.551)HPGLMS(0.547)PR;S(0.919)APAS(0.902)PT(0.675)HPGLMS(0.504)PR 46.926 0.0086515 14231800.0 3460.2 2856.3 2674.65 3810.4 3429.3 4629.0 2823.6000000000004 2591.8 2813.5 2562.6 3487.9 True False 3811.4769567353924 3097.0104251857224 2856.167832977028 4045.759753953722 3188.437798442752 4591.302958740056 2931.0536431332052 2540.1045157722347 2695.258379209801 2400.796998663947 3058.910411619793 1.2460243824915063 1.0124554198845443 0.9337206549519682 1.3226146599734379 1.0423442891073 1.5009602573842007 0.9582018590669076 0.8303951976243613 0.8811171353601603 0.7848536490457876 1.0 11.578802138990525 -7.964234183656733 24.999991221252902 0.931901961472521 1.1643607385249986 0.4369274618301139 0.15820408256635912 145.7880588378239 101904.30164231038 0.023140190771066826 0.03197272116046258 1.0858399506411866e-08 7.964234183656733 0.23245877705247753 S(ph)APAS(ph)PTHPGLMS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 3 S(0.823)APAS(0.779)PT(0.468)HPGLMS(0.93)PR;S(0.959)APAS(0.889)PT(0.21)HPGLMS(0.942)PR 45.876000000000005 0.013841 6847000.0 1554.6599999999999 1647.25 2209.45 1819.76 2498.8 1916.19 1586.07 1252.8200000000002 2436.5299999999997 2763.4 2518.3 True False 1817.048600212278 1731.0879890263811 2522.783233250657 2265.60128169213 2131.2298301403434 2118.959953936023 1874.2383885773813 1430.4110716003388 1884.659845338885 2139.146020735347 1892.9366084557826 0.9599099051154109 0.91449865848311 1.3327351914381802 1.196871184999882 1.1258854737237902 1.1194035470974515 0.990122109850443 0.7556571441487614 0.9956275539920749 1.1300674365849033 1.0 10.886410382868101 -7.784411828425407 6.40059861235538 0.9750258936903357 1.1146363118053377 0.2027003498139246 0.13205045602121232 0.20293083215385047 28.451542842486337 0.020000766431200453 0.02821197559643922 1.6428131539411467e-08 7.784411828425407 0.13961041811500208 S(ph)APAS(ph)PTHPGLMS(ph)PR ddPTM_A549_PD325901_60min_R1 3 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 3 S(0.997)APAS(0.974)PT(0.098)HPGLMS(0.931)PR;S(0.999)APAS(0.998)PT(0.292)HPGLMS(0.711)PR;S(0.735)APAS(0.816)PT(0.565)HPGLMS(0.884)PR 44.343999999999994 0.021228 57345700.0 4245.3 3758.0 3691.1600000000003 4009.51 4431.4 4744.3 3507.7999999999997 4522.4 3916.3999999999996 3949.3 4435.5 True False 4676.279730775322 4074.6998487021447 3941.6643143482265 4257.168326442103 4120.153751500074 4705.663993767653 3641.291248541813 4432.197184245834 3751.8073276478644 3699.9405240082447 3889.9616189511166 1.202140326524925 1.0474910160683901 1.013291312475996 1.0943985425722527 1.0591759392759834 1.2096941961695964 0.9360738241740403 1.139393551507823 0.9644844076018149 0.9511509075006994 1.0 11.925540205317755 -8.775702826052568 24.99857162992875 0.9832287401574621 1.0821700342727092 0.31062817213513905 0.07601478381966227 213.57204310438695 374311.8455948427 0.012060699847103484 0.012868407802316425 1.6760893785560657e-09 8.775702826052568 0.0989412941152471 S(ph)APAS(ph)PTHPGLMSPR ddPTM_A549_MK2206_60min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.987)APAS(0.813)PT(0.199)HPGLMSPR 68.08800000000001 0.00067527 15369000.0 2036.9 2337.7 1776.9 1803.6 2227.3 1950.8 1860.0 1591.9 2207.5 2771.4 2469.8 True False 2380.6789225762477 2456.6789448759882 2028.8911390450542 2245.4820809666808 1899.667120486468 2157.2323611637617 2197.9379237700286 1817.5566999892862 1707.5047746531307 2145.338815179108 1856.4804969876873 1.2823613964375717 1.3232990860190446 1.0928696220278744 1.2095371239343395 1.023262632475189 1.1620010900540416 1.183927290018068 0.9790335545880722 0.9197536830705824 1.1555945880714182 1.0 10.858354443890862 -6.551095586157289 0.39262771485293313 0.9563354692346387 1.3649060109176707 0.37025482956714095 0.09786017687037882 1.0966213026892422 0.21837214676021538 0.025202560168403925 0.18106720126663578 2.811282012454079e-07 6.551095586157289 0.408570541683032 S(ph)APAS(ph)PTHPGLMSPR ddPTM_A549_PD325901_60min_R1 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.967)APAS(0.947)PT(0.086)HPGLMSPR;S(0.968)APAS(0.854)PT(0.178)HPGLMSPR 58.01 0.0022866999999999996 41223000.0 5060.0 5213.0 5057.1 5530.4 6178.3 6195.3 5241.1 5874.9 5472.9 5931.1 5818.2 True False 5573.687475024877 5652.317805025091 5400.305216812711 5872.000247550304 5744.357521977909 6144.847530845166 5440.552928539964 5757.720510730109 5242.893045522417 5556.609333792139 5102.598284608583 1.0923233937183106 1.1077332546586462 1.058344183805754 1.1507863092539612 1.1257710683016378 1.2042585342021557 1.066231873465482 1.1283899279505558 1.027494768956635 1.0889764437371114 1.0 12.317016350916022 -8.831602816949976 4.1517592086485875 1.01174260131353 1.1173356246454194 0.33701162469159385 0.04464341405314772 0.10412879816989938 3.4200053950796905 0.0067182481083072065 0.007154401805501353 1.4736596184559026e-09 8.831602816949976 0.10559302333188936 S(ph)APASPT(ph)HPGLMS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 3 S(0.892)APAS(0.259)PT(0.851)HPGLMS(0.998)PR 41.615 0.032026 11815000.0 288.54 470.04 329.73 214.21 331.54 326.0 286.89 266.8 410.19 388.83 662.6 True False 337.2384978742946 493.96302829683447 376.4906721128516 266.69145961625253 282.7709051883823 360.49710361871365 339.0141994356898 304.6197170407324 317.28261993882995 300.9930329458368 498.05813317031425 0.677106697821906 0.9917778576420125 0.7559171250077913 0.5354625130176434 0.5677467876861012 0.7238052741434489 0.6806719474245825 0.6116147830007741 0.6370393309696903 0.604333134828882 1.0 8.960170332754398 -10.735791081549802 0.9450289443881897 1.0036058224973172 0.6869720291194701 0.0 0.16250859592757258 0.41127025831828623 0.640892484106163 0.08938634334788885 0.02200434900575692 1.8374220272585693e-11 10.735791081549802 -0.31663379337784714 S(ph)APASPT(ph)HPGLMSPR ddPTM_A549_MK2206_60min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.969)APAS(0.397)PT(0.63)HPGLMS(0.004)PR 41.53 0.025848000000000003 15610000.0 1581.1 1885.8 1697.7 1602.2 2179.0 1565.1 1421.8 2035.4 2008.2 2249.9 2928.1 True False 1847.9510258163402 1981.7791650969496 1938.4593881235799 1994.7390719254904 1858.4719865038464 1730.717843170702 1680.1226559227007 2323.924183151074 1553.3459064364276 1741.6460273765879 2200.971958551156 0.8396068012755599 0.9004109104604424 0.8807287982894695 0.9062991757689527 0.8443869442694905 0.7863425231051057 0.763354866651133 1.055862694716408 0.7057545192256587 0.7913076859566485 1.0 11.103925049375022 -11.17294411828127 1.580284827499794 0.9999290228962355 0.8357361460853623 0.0 0.10648952673166755 0.40279277304563027 1.8075776710751577 0.06807093787865066 0.01440646897399654 6.715152528548168e-12 11.17294411828127 -0.16419287681087325 S(ph)APATGGVK ddPTM_A549_MK2206_60min_R1 2 SAPATGGVK 9 0 P68431;Q71DI3;Q16695;Q5TEC6 P68431;Q5TEC6 HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3.1;Histone H3.2;Histone H3.1t;Histone H3 1 S(1)APATGGVK;S(1)APATGGVK 136.49 4.4491000000000005e-05 516120000.0 24762.0 20506.6 16446.6 15013.9 21205.0 15542.5 13579.6 15888.7 24351.0 25777.0 28803.0 True False 28941.22022722423 21550.29834922957 18778.97518567077 18692.306173999586 18085.77259009364 17187.197033723496 16046.837542810461 18140.97188210302 18835.537380556456 19953.95779709599 21650.420177640433 1.336750972487518 0.9953755249279521 0.8673723203332949 0.8633692104185648 0.8353543460912505 0.7938505069510683 0.7411790353788562 0.8379039174878549 0.8699848421421834 0.9216429812158348 1.0 14.40210740368463 -5.279106352357766 2.613411919046107 0.8926326301310137 1.4182949319902407 0.7897265743056797 0.06991919444813828 0.20959781722409868 1.887086847814194 0.0128757368102081 0.23587573378195356 5.258884682374627e-06 5.279106352357766 0.525662301859227 S(ph)APATGGVK ddPTM_A549_PD325901_60min_R1 2 SAPATGGVK 9 0 P68431;Q71DI3;Q16695;Q5TEC6 P68431;Q5TEC6 HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3.1;Histone H3.2;Histone H3.1t;Histone H3 1 S(1)APATGGVK;S(1)APATGGVK 121.36 0.00012747 1095030000.0 21249.2 23149.2 20335.2 19580.7 23101.6 20118.6 19770.7 19187.5 19707.7 25219.0 23920.8 True False 23406.40314116573 25100.064326124473 21715.26895749142 20790.15536800379 21479.023312193454 19954.76079190058 20523.08480744217 18804.790260197453 18879.45390437285 23626.66803609853 20978.69324644478 1.1157226461248901 1.1964550904703342 1.0351106573890854 0.9910128873983637 1.0238494390413695 0.9511917905221421 0.9782823251357746 0.8963756721779735 0.8999346948157659 1.1262221034716975 1.0 14.356637195425156 -6.086020465581009 0.9994066961046071 0.9501625289092115 1.176875268013233 0.43220337837653944 0.0678688830991361 0.30962506593165673 0.4704678381291222 0.007613667064109763 0.054862071615045006 8.2031288720634e-07 6.086020465581009 0.22671273910402157 S(ph)APDLK ddPTM_A549_MK2206_60min_R1 1 SAPDLK 6 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 S(1)APDLK 78.377 0.044067 24936000.0 8998.4 10138.0 9574.8 8866.4 14251.0 11640.0 10319.0 11563.0 14619.0 14083.0 13884.0 True False 10517.109930242084 10653.980897100902 10932.650615188582 11038.668398027816 12154.696778185546 12871.73707399334 12193.828728700499 13202.090660202359 11307.819841745917 10901.640518931714 10436.219621093627 1.0077509205522048 1.0208659154285271 1.0475680861575174 1.057726724696031 1.1646647176357368 1.2333716174367448 1.1684143465181973 1.2650261435202426 1.0835168530653203 1.0445966944675427 1.0 13.34931158938939 -3.7184010765225164 13.663636774788623 1.0787810418762929 0.5649271996009587 0.0 0.09105944210407428 0.0 0.0 0.01364203809267083 0.0 0.00019124889011901082 3.7184010765225164 -0.5138538422753341 S(ph)APDLK ddPTM_A549_PD325901_60min_R1 2 SAPDLK 6 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 S(1)APDLK;S(1)APDLK 102.51 0.031249000000000002 77273000.0 19540.2 20107.7 20161.0 19992.9 24900.0 19789.7 19957.4 21790.9 22279.8 22669.0 24088.0 True False 21523.90671926504 21802.246446979287 21529.246697941733 21227.81602582968 23151.109900336643 19628.53924445412 20716.88977810831 21356.26340486965 21343.457486091545 21237.675471284252 21125.328706412904 1.0188673046649988 1.032042944750057 1.019120080787487 1.004851395253588 1.095893475650809 0.9291471634472409 0.980665913700997 1.0109316499480854 1.0103254620418014 1.0053181073029762 1.0 14.366686169200952 -7.255804672786099 24.994785482585307 0.9987435432530637 1.0315744403579583 0.3150524797751165 0.0311387147413329 579.7715203045354 2571789.588536083 0.004468838949168217 0.007607186018163233 5.548752161529556e-08 7.255804672786099 0.03283089710489462 S(ph)APDLKESGAAV ddPTM_A549_MK2206_60min_R1 2 SAPDLKESGAAV 12 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 S(1)APDLKESGAAV;S(1)APDLKESGAAV 95.428 8.557200000000001e-09 8159900.0 3077.7 3105.8 3273.3 3111.2 4718.8 2943.8 2960.9 2828.6 5817.2 4890.9 5430.8 True False 3597.1405174593347 3263.8719540556326 3737.5031602432173 3873.4441396670763 4024.6707709565635 3255.3109620637115 3498.857203489609 3229.5627122241963 4499.613488159541 3786.0422931224284 4082.1824775450386 0.8811807255668295 0.7995409249854197 0.9155649412543885 0.9488659953281916 0.9859115297013714 0.7974437644496003 0.8571045568726677 0.79113629289948 1.1022568228908618 0.9274554270781388 1.0 11.995124958351983 -8.767370379820049 24.999977217260373 1.048287949015306 0.8744892614889068 0.3879490496631991 0.07281791076327927 75.50292327567396 318254.3278804423 0.012146102152862066 0.013096925125881042 1.7085575826176283e-09 8.767370379820049 -0.17379868752639926 S(ph)APDLKESGAAV ddPTM_A549_PD325901_60min_R1 2 SAPDLKESGAAV 12 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 S(1)APDLKESGAAV;S(1)APDLKESGAAV 108.97 8.794e-05 28113000.0 5586.8 6215.5 5595.8 6260.7 7400.6 8049.8 8469.599999999999 8382.0 7790.200000000001 7476.200000000001 8286.0 True False 6153.967823215219 6739.301998299143 5975.564638278973 6647.409219918668 6880.807386683999 7984.245097702685 8791.915262742952 8214.814434448208 7462.80498515024 7004.151456103727 7266.874529281696 0.8468520817881132 0.9274003522619371 0.8223018870355583 0.9147549187939179 0.9468730138325564 1.0987178966047042 1.2098619877522505 1.1304467142437662 1.0269621355204424 0.9638464828146773 1.0 12.827119281455483 -6.955074214154569 2.850592273271536 1.0443055442063687 0.8762504133249424 0.6131314008666946 0.0706911104076814 0.1729785067663275 2.8626028591495762 0.01163106719252307 0.02300324242087296 1.1089852907767949e-07 6.955074214154569 -0.16805513088142632 S(ph)APPMEGAR ddPTM_A549_MK2206_60min_R1 4 SAPPMEGAR 9 0 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(1)APPMEGAR;S(1)APPMEGAR;S(1)APPMEGAR;S(1)APPMEGAR 124.33 8.8618e-05 73555000.0 12156.5 8862.1 6629.400000000001 7138.900000000001 9979.3 8364.0 7366.200000000001 8110.5 11260.800000000001 12179.3 17955.0 True False 14208.220002110145 9313.14303691043 7569.548605540711 8887.930820477402 8511.358189498776 9249.072928426138 8704.54319036278 9260.188212364536 8710.246779802472 9427.987671108793 13496.277967209464 1.0527509908013464 0.6900526989394874 0.56086193718977 0.6585468113558053 0.6306448496524716 0.6853054561337334 0.6449587961593058 0.6861290375659922 0.6453814007806356 0.6985620549617471 1.0 13.720273972112766 -10.722005235954297 0.8563334935765623 1.0109440942010761 0.6839934209424917 0.0 0.14829927569277834 0.44063513467650417 0.5432912172293628 0.09454333458133687 0.02147634651515808 1.8966830542255703e-11 10.722005235954297 -0.3269506732585844 S(ph)APPMEGAR ddPTM_A549_PD325901_60min_R1 4 SAPPMEGAR 9 0 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(1)APPMEGAR;S(1)APPMEGAR;S(1)APPMEGAR;S(1)APPMEGAR 106.4 0.00052854 85383000.0 14137.8 12532.900000000001 11914.2 11424.699999999999 12369.199999999999 10837.0 11929.5 10839.0 11533.0 13842.399999999998 18199.0 True False 15573.059048301733 13589.091467216374 12722.769257904733 12130.377771623736 11500.430063423457 10748.747064995903 12383.483650572882 10622.807641968988 11048.308117087838 12968.38850164124 15960.638372966156 0.9757165524581461 0.8514127787165039 0.7971341095888954 0.7600183331119107 0.7205495040162478 0.6734534555461101 0.7758764631587547 0.6655628298653586 0.6922221943077956 0.8125231709783529 1.0 13.962230735313607 -10.841434422719479 1.097342962148798 0.9994906983568889 0.7598118049731186 0.1342506970519084 0.10011984551332742 0.3424773843875005 0.7345788202125072 0.06224560802409764 0.015397641119494198 1.4406735315915672e-11 10.841434422719479 -0.23967889338377024 S(ph)APS(ph)SPAPR ddPTM_A549_PD325901_60min_R1 1 SAPSSPAPR 9 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 2 S(1)APS(0.5)S(0.5)PAPR 87.29799999999999 0.0013256 10038000.0 910.99 964.8 847.2 829.46 1104.6 1252.0 1011.8 1308.7 1152.5 1292.5 1369.0 True False 1003.4730341646078 1046.1070819658944 904.696086627461 880.6938603596619 1027.0167066631273 1241.804127099277 1050.3046026782044 1282.5969518447107 1104.0644329267095 1210.8913294205706 1200.621678806015 0.8357945320148924 0.8713045086827175 0.7535230311076476 0.7335315327934837 0.855404100052955 1.0343009367732028 0.8748006313884846 1.0682773553782718 0.9195772926777992 1.0085536108466477 1.0 10.229565907734175 -7.0615336290285375 5.534057274038419 0.9669054972397643 0.799551400895866 0.6686858556568132 0.06135471404289433 0.10374036844593747 6.49416339158764 0.008832011022102008 0.015612684187389285 8.678933704956642e-08 7.0615336290285375 -0.1673540963438983 S(ph)APSFRPK ddPTM_A549_MK2206_60min_R1 2 SAPSFRPK 8 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.996)APS(0.004)FRPK;S(0.999)APS(0.001)FRPK 105.98 0.00054155 30836000.0 6315.1 5705.0 7152.6 6288.8 9209.7 6804.5 6208.4 6444.7 10060.2 9715.8 9578.0 True False 7380.934490628533 5995.360131974814 8166.946232840149 7829.556282314962 7854.9653300158225 7524.547673538457 7336.385917168732 7358.255961065994 7781.580762838245 7520.994032083844 7199.51826064785 1.0251983845880763 0.8327446246987253 1.134373986865233 1.0875111360034828 1.0910404065436723 1.045145994651781 1.0190106687094598 1.0220483780540977 1.0808474235522 1.0446524003131101 1.0 12.813684659796746 -5.764489143322689 24.99999905965403 1.0486233624602888 0.9289715176899794 0.43682190871209126 0.05575720915355461 52.20343730724432 427948.3685538448 0.007675154831908429 0.025449272490590653 1.7199303362474886e-06 5.764489143322689 -0.11965184477030932 S(ph)APSFRPK ddPTM_A549_PD325901_60min_R1 1 SAPSFRPK 8 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.922)APS(0.078)FRPK 57.785 0.0044532 27145000.0 5939.9 5556.0 6525.1 7063.6 6394.6 7052.7 6941.7 6497.5 7862.7 7833.2 8332.4 True False 6542.914275276732 6024.2236187836925 6967.932524613837 7499.902529400466 5945.465356172401 6995.265149515234 7205.870192143995 6367.902265309859 7532.258062275782 7338.610415177726 7307.567623435526 0.8953614406924495 0.8243815082140161 0.9535228250598089 1.0263199625205133 0.8136038778628837 0.957263142811196 0.9860832719542156 0.8714120201758873 1.030747637301319 1.004248033455434 1.0 12.835175559298092 -8.772839464831609 24.999833087831913 1.0145197248509266 0.9181672901379823 0.3210397380561353 0.06186731374876323 177.84460701687422 390003.3046423457 0.010524721915520282 0.011252163147013048 1.6871765680133698e-09 8.772839464831609 -0.0963524347129443 S(ph)APSGPVR ddPTM_A549_MK2206_60min_R1 1 SAPSGPVR 8 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 S(0.591)APS(0.409)GPVR 76.064 0.0047227 8877800.0 1343.0 1110.6 1347.5 1035.6 1597.3 1127.3 1061.7 1161.4 1857.8 1763.1 2207.6 True False 1569.665566802446 1167.124796243861 1538.5957622056446 1289.3220464898498 1362.3392859305154 1246.5901377588223 1254.5971471326009 1326.0320066383304 1437.0112662969802 1364.8144854738696 1659.3919933395503 0.9459281309676995 0.7033448401152073 0.9272045233321866 0.7769846134396916 0.8209870189796372 0.7512330677515454 0.7560583347203611 0.79910715006505 0.8659866216450607 0.8224786493799822 1.0 10.69643901486508 -9.822968106888455 0.7695444115720712 0.9873345795589582 0.8070527354469482 0.056445874840705845 0.08516590248223287 0.3232118342512255 0.3984548271966529 0.027244061023200154 0.013908259786256092 1.503252355783431e-10 9.822968106888455 -0.18028184411200998 S(ph)APSS(ph)PAPR ddPTM_A549_MK2206_60min_R1 2 SAPSSPAPR 9 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 2 S(0.979)APS(0.315)S(0.706)PAPR;S(1)APS(0.194)S(0.806)PAPR 99.28299999999999 0.00093348 14335400.0 1851.44 1907.09 1901.5 1639.03 2246.8 1683.03 1881.31 1490.9 2552.0 2533.1000000000004 2445.6 True False 2163.9178086379134 2004.152735160007 2171.1612926412135 2040.592423578853 1916.298696317962 1861.1271174951041 2223.1196749289206 1702.2396406897585 1973.976074706585 1960.8709506856458 1838.2900248737108 1.1771362403963286 1.0902266280304116 1.1810765783763477 1.110049228341453 1.0424354538123604 1.0124230085092054 1.2093410968063363 0.9259907945193258 1.073811013494563 1.0666820382819389 1.0 10.844148681560354 -2.0000000000979195 0.14299565617953405 0.9935676830221187 1.5931764290105583 0.27066128512404697 0.06990077024202228 57.429878292919696 0.5200400689189271 0.13314313829497618 7.1272925984978075 0.009999999997745321 2.0000000000979195 0.5996087459884396 S(ph)APSS(ph)PAPR ddPTM_A549_PD325901_60min_R1 1 SAPSSPAPR 9 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 2 S(0.994)APS(0.37)S(0.636)PAPR 85.821 0.0014313 10385000.0 1143.8 1071.9 987.57 1079.5 1127.1 989.0 1270.5 1206.6 1502.4 1272.4 1422.7 True False 1259.9177339789437 1162.2327748333769 1054.5924389408422 1146.1782632776199 1047.9363842839136 980.9459119019044 1318.849572744276 1182.533416440612 1439.2593527367364 1192.0604468508584 1247.7169192383617 1.0097785118983797 0.9314875489087969 0.8452177113896895 0.9186204383421172 0.8398831242294933 0.7861926826324507 1.0570102500087404 0.947757779194387 1.1535143352991455 0.9553933496217416 1.0 10.285074938785257 -7.788241510295249 23.00525208514492 1.0619392029676744 0.8876704626047974 0.3758330160127168 0.07909028487796457 55.16085394084512 47346.30189416057 0.013006594933037772 0.017975471850570968 1.628390236244494e-08 7.788241510295249 -0.17426874036287698 S(ph)APSS(ph)PTLDCEK ddPTM_A549_MK2206_60min_R1 1 SAPSSPTLDCEK 12 0 J3QSD2;J3QRZ1;A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2 J3QSD2 NDEL1 Nuclear distribution protein nudE-like 1 2 S(0.999)APS(0.18)S(0.802)PT(0.019)LDCEK 92.039 0.00030886 3847900.0 3169.6 3649.3 3402.2 2571.8 4492.2 3885.7 3333.8 3587.2 4834.3 4766.6 4980.2 True False 3704.5509907200526 3835.033782579438 3884.683118497994 3201.8911154524912 3831.403330781355 4296.882194881094 3939.508306593828 4095.69658533926 3739.3387687907707 3689.8217494525247 3743.478893472378 0.9896011427177525 1.024457167173216 1.037720053737137 0.8553250082525454 1.0234873602365686 1.147831286660572 1.0523655718917697 1.0940883338439693 0.998894043535593 0.9856665028582325 1.0 11.87016390491265 -5.241987916867953 20.404038486053427 1.0140114777163702 0.9896008739215384 0.005963877981274401 0.06938808812444398 1875.2623631045856 1966674.7670330165 0.009450263933634222 0.3377592257053784 5.728119677905771e-06 5.241987916867953 -0.024410603794831842 S(ph)APTS(ph)PTATNISSK ddPTM_A549_MK2206_60min_R1 2 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 2 S(1)APT(0.026)S(0.962)PT(0.012)ATNISSK;S(1)APT(0.177)S(0.788)PT(0.035)AT(0.001)NISSK 114.64 8.8502e-10 3552900.0 1706.6 1780.5 1473.9 1668.4 2232.7 1479.1 1899.0 2199.7 2289.8 1943.5 2626.1 True False 1994.6323576359277 1871.119844869614 1682.9211828682 2077.158074897322 1904.2727876398062 1635.6173802528824 2244.023718945851 2511.5142112987196 1771.1639560592234 1504.462000180629 1973.9668933271396 1.0104690024836012 0.9478982910984004 0.852557957561092 1.052276044709267 0.9646933766098461 0.828594129811384 1.1368091970192713 1.2723183047237125 0.8972612266429201 0.7621515868712693 1.0 10.946882078289587 -7.737163364712207 24.998090119244317 0.9920546968982148 0.9448588178697847 0.0538333621690803 0.13473499529642718 813.1712258853898 837356.7077712342 0.019467668249568568 0.02886725817846598 1.8316253064864467e-08 7.737163364712207 -0.04719587902843014 S(ph)APTS(ph)PTATNISSK ddPTM_A549_PD325901_60min_R1 1 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 2 S(0.999)APT(0.159)S(0.81)PT(0.031)AT(0.001)NISSK 108.71 1.6898e-05 5432000.0 3944.9 4243.6 4386.1 4745.7 4571.3 4539.4 4572.7 4543.3 4854.7 4784.2 4975.3 True False 4345.3833439181135 4601.223064915498 4683.767121761929 5038.831110733307 4250.227658128874 4502.432631433276 4746.7166007774495 4452.6803173500975 4650.673841674013 4482.124795523321 4363.36964102525 0.9958778882866064 1.054511408259778 1.07342891093256 1.154802715625382 0.9740700439787194 1.0318705500218293 1.0878557150299386 1.0204682810929269 1.065844570661049 1.0272163864783566 1.0 12.091226980857622 -10.87513678373325 0.894104243288208 0.9967095132208981 1.0532332991695186 0.07564712353904168 0.046542632283092786 1.0466218292168372 1.335590205095225 0.041799290669799954 0.007978954193984793 1.3331014974742247e-11 10.87513678373325 0.05652378594862051 S(ph)AQLER ddPTM_A549_MK2206_60min_R1 1 SAQLER 6 0 G3V2B0;G3V2H1;Q8N3R9-2;Q8N3R9 G3V2B0 MPP5 MAGUK p55 subfamily member 5 1 S(1)AQLER 68.335 0.053545 204190000.0 563.29 904.15 736.06 613.66 972.06 924.98 770.44 582.48 1206.8 977.47 1040.5 True False 658.3595808817197 950.1673730631068 840.4443760512706 764.0067275482438 829.0712616800956 1022.8607696479686 910.4189752631077 665.0483237701868 933.4617268635996 756.6588481176021 782.1151336608993 0.8417681138582389 1.21486892679802 1.0745788438044226 0.9768468792722443 1.0600373602277782 1.307813550238051 1.164047256062733 0.8503202343844826 1.1935093526374845 0.9674519972217617 1.0 9.61123718929608 -5.2417718211898565 23.873075942232813 1.0915992418333924 0.8417676839666549 0.22617360423489685 0.12578875139146356 2697.8758479871904 3274669.9337861286 0.016792106740065878 0.8374515828685616 5.730970577388934e-06 5.2417718211898565 -0.2498315578667375 S(ph)ARHT(ph)PAR ddPTM_A549_MK2206_60min_R1 1 SARHTPAR 8 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 2 S(1)ARHT(1)PAR 40.725 0.051122 12085000.0 674.83 446.71 257.76 264.23 550.02 375.0 409.37 676.21 643.78 416.05 489.63 True False 788.7248059905394 469.4456309473214 294.3142439080719 328.9663618617354 469.1127866070883 414.6822510951461 483.7472300288903 772.0648383062731 497.9648579054095 322.0640160407257 368.04135789945803 2.1430330832710496 1.2755241248608942 0.7996770949542932 0.893829877542194 1.274619758182832 1.1267273152720774 1.314382798688187 2.0977665192648995 1.3530133155346202 0.8750756107380396 1.0 8.523724085089226 -10.514980956998011 1.1360163759392747 1.0223861725088506 1.335515256331598 0.1313050641267388 0.4038611932481471 0.9346599618845508 2.3383758515259405 0.19208670053242757 0.07212793068753753 3.055055068738108e-11 10.514980956998011 0.3131290838227474 S(ph)ARHT(ph)PAR ddPTM_A549_PD325901_60min_R1 3 SARHTPAR 8 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 2 S(1)ARHT(1)PAR;S(1)ARHT(1)PAR;S(1)ARHT(1)PAR 50.207 0.016919999999999998 30429000.0 2037.67 2289.46 1867.71 1695.0 1684.3200000000002 1173.54 1510.85 1577.57 1531.07 2575.53 2997.91 True False 2244.5327583466305 2482.4008290605684 1994.4640320526146 1799.6963003756978 1566.0191737885557 1163.9830793259473 1568.3462235188424 1546.104128770276 1466.7244523393465 2412.9105962572994 2629.186075317266 0.8536987090484955 0.944170841449864 0.7585861079885496 0.6845070104665479 0.5956288862512643 0.44271612810268235 0.5965139699477485 0.5880542816216255 0.5578625514979406 0.9177405201212818 1.0 11.360400534049665 -5.886611425998243 4.899401558962711 0.7142892325299536 0.8973404125584563 0.20378457111554948 0.1567947474843571 0.3565854366014422 13.684009092822137 0.028588211304619564 0.09413582661287397 1.2983404086950201e-06 5.886611425998243 0.18305118002850274 S(ph)ARLSAKPAPPKPEPK ddPTM_A549_PD325901_60min_R1 1 SARLSAKPAPPKPEPK 16 3 A0A087WZE9;Q15651-2;Q15651;P05204 A0A087WZE9;Q15651;P05204 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 1 S(0.532)ARLS(0.468)AKPAPPKPEPK 60.032 0.00075401 5119400.0 1990.1 2091.0 1558.0 1482.9 2440.8 2298.9 1826.9 1922.4 1552.5 1710.1 2026.9 True False 2192.133486965812 2267.2159083651377 1663.7352490150888 1574.4953650897492 2269.3666283028806 2280.178520597867 1896.4236792180382 1884.0562239063736 1487.2538239641792 1602.1239941525089 1777.6041495777283 1.2331955275231303 1.275433514769707 0.9359424872012764 0.8857401494386543 1.2766434129004318 1.2827256963478206 1.066842513654424 1.0598851405437668 0.8366619892946795 0.9012827712700238 1.0 10.795718374283133 -8.49335155224704 3.0199687594274702 0.9232801679032063 1.1351504209381365 0.3474964641016419 0.13264516470530108 0.24043913214797877 4.433576802514793 0.024884932749541608 0.02948265220414562 3.2110602006400884e-09 8.49335155224704 0.21187025303493012 S(ph)AS(ph)PDYNR ddPTM_A549_PD325901_60min_R1 1 SASPDYNR 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 S(0.993)AS(0.995)PDY(0.012)NR 54.419 0.026481 3384100.0 838.49 1115.0 931.99 1077.1 1255.9 1263.3 981.45 912.59 1385.7 1104.8 1448.5 True False 923.6128875362867 1208.9649630928398 995.2404459111513 1143.6300207284157 1167.689916619791 1253.0121036457804 1018.7996168200474 894.3876765369943 1327.463847901555 1035.0427394536523 1270.3436827980365 0.7270574884915815 0.9516833747147818 0.783441882214939 0.9002524562561499 0.9191921307845273 0.98635677936062 0.8019873917710657 0.7040517370598732 1.0449643398688035 0.8147737919032159 1.0 10.311003145746678 -8.796939907301947 24.999838088882075 1.0212332142819989 0.8554993675860266 0.07670041000421879 0.10598616039708597 115.08172358715686 81041.24805723716 0.01459347938163042 0.01553621397564964 1.5960999819994225e-09 8.796939907301947 -0.16573384669597224 S(ph)AS(ph)PERMD ddPTM_A549_MK2206_60min_R1 2 SASPERMD 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 2 S(1)AS(1)PERMD;S(1)AS(1)PERMD 55.31399999999999 0.015628 46900000.0 1402.87 1484.75 1539.79 1317.8400000000001 1841.25 1094.21 1029.52 1417.37 1810.02 2198.85 2573.33 True False 1639.6401591214794 1560.3174331200003 1758.1553756487044 1640.7108591600859 1570.4045640891266 1209.9985759221856 1216.570457677268 1618.2865380135786 1400.0533600079984 1702.1282578323526 1934.3011407050478 0.8476654046348929 0.8066569368569304 0.9089357073986222 0.848218937906458 0.8118718078802963 0.6255481891930975 0.6289457375979374 0.8366259544383648 0.7238032023791717 0.8799706633125032 1.0 10.917596702217862 -10.824726639409622 1.0183641151629463 1.0027546866538815 0.7784274890770065 0.275972214547501 0.09200795430697893 0.418838504361184 0.7553214580301109 0.068839206606014 0.016170633813565902 1.497177737170188e-11 10.824726639409622 -0.22432719757687491 S(ph)AS(ph)PERMD ddPTM_A549_PD325901_60min_R1 2 SASPERMD 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 2 S(1)AS(1)PERMD;S(1)AS(1)PERMD 60.255 0.008426000000000001 144798000.0 6166.9 7399.0 6794.9 7393.4 9007.7 7354.1 7170.0 7553.0 7512.7 8519.4 9020.9 True False 6792.959148168168 8022.539696792762 7256.042775053039 7850.073526370316 8375.030226878014 7294.210647844084 7442.858273574549 7402.349489786129 7196.967345117996 7981.483630070101 7911.386488196618 0.8586306784914267 1.0140497760742668 0.9171644927066427 0.9922500358290196 1.058604612399246 0.9219889154355777 0.9407779893801055 0.9356576752798076 0.9096973527782395 1.0088602853593442 1.0 12.949714837054026 -6.828978603118197 0.0030127434049410946 1.9005959600283493 1.8702759216483696e-05 0.05128907329097576 0.05472102753210685 136725.2215033351 109.01721062963763 33960.87813647623 34813.650056340746 1.4825911278554438e-07 6.828978603118197 -1.9005772572691328 S(ph)AS(ph)PPPATSSSSSSR ddPTM_A549_MK2206_60min_R1 2 SASPPPATSSSSSSR 15 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 S(0.998)AS(0.968)PPPAT(0.015)S(0.003)S(0.003)S(0.003)S(0.003)S(0.004)S(0.003)R;S(0.983)AS(0.647)PPPAT(0.245)S(0.063)S(0.017)S(0.014)S(0.012)S(0.014)S(0.004)R 62.75899999999999 0.005449600000000001 12467000.0 1753.54 2175.38 1721.56 1377.69 2002.9 1714.4299999999998 1410.8200000000002 1691.29 2648.5 3483.2 3081.5 True False 2049.494682063113 2286.0975502007673 1965.7030949037114 1715.2241118468544 1708.276063225587 1895.8498446534704 1667.1477320501242 1931.0355368583957 2048.6189787854205 2696.342700812536 2316.278504926537 0.8848222170624144 0.9869700665694658 0.8486471254310826 0.7405085822791652 0.7375089220023507 0.8184895903584785 0.7197527104379874 0.8336802041512881 0.8844441523021405 1.164083980003973 1.0 11.177593015329355 -9.630062712834595 0.8809918257563841 0.9818984069287411 0.8205973045585135 0.48314539259337386 0.09160770672786969 0.37284001638200087 0.6097355924423294 0.026796703434224998 0.01695632799065743 2.3438903292785156e-10 9.630062712834595 -0.16130110237022754 S(ph)AS(ph)PPPATSSSSSSR ddPTM_A549_PD325901_60min_R1 2 SASPPPATSSSSSSR 15 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 S(0.999)AS(0.993)PPPAT(0.005)S(0.002)S(0.001)SSSSR;S(1)AS(0.998)PPPAT(0.001)SSSSSSR 88.243 4.3199e-05 17104400.0 3027.5 2044.38 2391.3 2931.8999999999996 2930.8999999999996 2697.8999999999996 2610.1000000000004 2478.8 3131.3 2906.7 3920.5 True False 3334.8495712722956 2216.667077352233 2553.58799805506 3112.9968041719817 2725.0436950560907 2675.929196885895 2709.4287838015234 2429.3583894190183 2999.702350389072 2723.170465939474 3438.3033540971373 0.969911385887006 0.644697936472306 0.7426883945572061 0.9053874785255597 0.7925547615828851 0.7782702459040489 0.7880133032976642 0.7065573159867223 0.8724367926450057 0.7920099495277229 1.0 11.747481120968654 -9.59491775627108 0.9115601016104121 0.9794526499295775 0.7887727255733857 0.019641078898648523 0.10286439979344918 0.3102764500008486 0.5428704973061914 0.026189715213836902 0.017216005930080963 2.541453943206844e-10 9.59491775627108 -0.19067992435619174 S(ph)AS(ph)PYPSHS(ph)LSSPQR ddPTM_A549_MK2206_60min_R1 1 SASPYPSHSLSSPQR 15 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 S(0.958)AS(0.851)PY(0.178)PS(0.119)HS(0.408)LS(0.297)S(0.189)PQR 60.918 0.0019816 3000400.0 563.83 515.26 537.24 450.72 533.72 588.71 533.97 469.88 689.98 708.17 1019.3 True False 658.9907196799869 541.4845331465982 613.4287104173367 561.14642023359 455.2104950146087 651.0069014459295 630.9854371803663 536.4869289471485 533.7006316716497 548.193905154575 766.1796787511332 0.8600994491972647 0.706733091680549 0.800632968257812 0.7323953320561232 0.5941302120627868 0.8496791542514748 0.8235476020570887 0.7002103342412029 0.6965737234659858 0.7154900088816329 1.0 9.581538951697114 -10.7953229360908 0.9484924499443766 1.0061771287472066 0.7472459939708636 0.0 0.11176309968004546 0.31898476604249204 0.48962588439290244 0.058137900669618374 0.013243109725460096 1.6020536800568308e-11 10.7953229360908 -0.258931134776343 S(ph)AS(ph)PYPSHSLS(ph)SPQR ddPTM_A549_PD325901_60min_R1 1 SASPYPSHSLSSPQR 15 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 S(0.99)AS(0.962)PY(0.045)PS(0.003)HS(0.006)LS(0.552)S(0.442)PQR 89.35799999999999 1.2704e-05 6416800.0 1059.7 1070.9 1311.6 1315.3 1496.8 1357.2 1106.4 1112.9 667.84 1482.0 1209.8 True False 1167.2799638900915 1161.1485013238769 1400.6130632915213 1396.543093736965 1391.6699316796753 1346.1474131782256 1148.5046574453104 1090.7023364468398 639.7730072761595 1388.4262670802977 1061.0022695540656 1.1001672639029263 1.0943883294537176 1.3200848890551313 1.3162489221855536 1.3116559423238443 1.2687507386237782 1.082471442712391 1.027992463112503 0.6029892919503869 1.3085987720496084 1.0 10.051212026938227 -8.300896267161669 2.2531896933468483 0.8144834420591336 1.2337194504540945 0.12502124970323958 0.1922042706335231 0.16499268506616963 1.641124963997516 0.02822104147570603 0.03567627422059802 5.001539843342748e-09 8.300896267161669 0.4192360083949609 S(ph)AS(ph)PYPSHSLSS(ph)PQR ddPTM_A549_MK2206_60min_R1 1 SASPYPSHSLSSPQR 15 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 S(0.98)AS(0.95)PY(0.054)PS(0.03)HS(0.065)LS(0.198)S(0.723)PQR 81.656 0.00011941 3661900.0 479.88 624.13 421.8 400.14 681.67 371.63 392.77 621.93 722.78 1129.6 1249.5 True False 560.8720120604302 655.8955511252304 481.6175825590656 498.1743179629669 581.3972460027885 410.955639931971 464.1312249027705 710.090482080744 559.0714840424868 874.4225754587278 939.2146655543431 0.5971712672623062 0.6983446651550185 0.5127875449802579 0.5304158210401607 0.6190248803873142 0.4375524094796974 0.494169482147972 0.7560470551869358 0.5952542102954831 0.9310146098949874 1.0 9.87531112564745 -10.663265688722941 0.5249447323638465 1.0756096991808712 0.5658057391989062 0.7493536471756097 0.08596245388141159 0.4958477938660161 0.1910487660723414 0.1260436157749884 0.020197420275532278 2.1713723900223303e-11 10.663265688722941 -0.509803959981965 S(ph)AS(ph)PYPSHSLSS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 SASPYPSHSLSSPQR 15 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 S(0.968)AS(0.855)PY(0.062)PS(0.098)HS(0.032)LS(0.306)S(0.678)PQR 106.38 1.7182e-06 7289700.0 832.02 806.02 636.56 896.15 1033.6 1207.8 679.6 935.71 1257.7 1004.0 1018.8 True False 916.4860578992491 873.9461341274365 679.7607895462422 951.5031501956831 961.0035017264244 1197.9640772448138 705.4625498913894 917.0465299997051 1204.8432427695634 940.607268656288 893.4940587053089 1.0257326827973048 0.9781219311002496 0.7607893784220898 1.0649238693029819 1.075556678148412 1.3407633386848572 0.7895548302958152 1.0263599640813774 1.3484625119000855 1.0527291810079265 1.0 9.803314325863107 -6.489557923237137 5.537686675840798 1.135122619773992 0.9237336696019713 0.13850498714324622 0.1617606308369856 0.23655125915976719 20.15915590488427 0.025907158122892474 0.05945055566541964 3.2392321688339864e-07 6.489557923237137 -0.21138895017202075 S(ph)ASADNLTLPR ddPTM_A549_MK2206_60min_R1 2 SASADNLTLPR 11 0 Q8ND76;Q8ND76-3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 S(0.603)AS(0.396)ADNLT(0.001)LPR;S(0.731)AS(0.226)ADNLT(0.043)LPR 112.33 4.881e-05 279700000.0 16367.099999999999 16486.0 15796.0 14163.8 23103.0 17126.6 14903.6 16703.6 24118.0 24026.0 23486.0 True False 19129.466342823744 17325.06698260066 18036.110322671877 17633.931635837136 19704.579304359053 18938.925444283006 17611.391204676864 19071.38645262959 18655.31150853191 18598.50991321832 17653.77801937519 1.0835905108713257 0.9813801308471327 1.02165725109249 0.9988757996437776 1.116167841395371 1.0727973028491327 0.997598994693838 1.0803005697533163 1.056731963439074 1.0535144314608622 1.0 14.107689341887353 -3.6755425996946203 10.391022608388427 1.0345155424914378 1.0817241341306914 0.0 0.04296382468834816 0.0 0.0 0.005619041978687658 0.0 0.00021108501335842959 3.6755425996946203 0.047208591639253505 S(ph)ASADNLTLPR ddPTM_A549_PD325901_60min_R1 1 SASADNLTLPR 11 0 Q8ND76;Q8ND76-3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 S(0.632)AS(0.367)ADNLT(0.001)LPR 133.07 6.925399999999999e-08 205180000.0 7750.1 8294.7 8857.6 8333.3 10417.0 9919.8 8390.0 8501.5 9293.8 8905.3 10505.0 True False 8536.884446677932 8993.723479252185 9458.73000107577 8848.029014702543 9685.34585669908 9839.016437699202 8709.286041184163 8331.930913202274 8903.213906060091 8343.017838211988 9212.951596681649 0.9266177464508524 0.976204355886508 1.026677487862049 0.9603902638422039 1.0512750181155384 1.0679548605512104 0.9453307064286653 0.9043715063263 0.9663801890880312 0.9055749127366526 1.0 13.169447718036682 -5.6343457399535355 0.0015540776727862992 1.2687750940342208 0.6956835539793118 0.0 0.05398356382040757 3659617.473743766 888.5585819573619 162042.79363562085 165643.67169513713 2.3208884115102904e-06 5.6343457399535355 -0.573091540054909 S(ph)ASAPTLAETEKETAEHLDLAGASSR ddPTM_A549_MK2206_60min_R1 1 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.508)AS(0.478)APT(0.012)LAET(0.002)EKETAEHLDLAGASSR 50.229 0.0025021 3455100.0 646.55 953.13 762.16 473.37 1039.2 784.61 742.41 697.52 1471.4 1281.8 1413.9 True False 755.6718333701567 1001.6402458526123 870.2457485140294 589.3456712503864 886.3350566199158 867.6369094180334 877.2962870893042 796.3955960654112 1138.1302493429735 992.2404897512372 1062.789608345166 0.7110267426746748 0.9424633417447812 0.8188316310968262 0.5545271299444081 0.833970382905793 0.8163769222104097 0.8254656238644569 0.7493445455356418 1.070889516049294 0.9336189232186994 1.0 10.053640311409891 -8.761182633515784 24.99999915520268 1.033475615092596 0.7849217866360214 0.49789441454904615 0.09691042854776474 3.342587374897885 325472.0964347716 0.015841088106157176 0.017418328827148662 1.7330750358127024e-09 8.761182633515784 -0.24855382845657448 S(ph)ASAPTLAETEKETAEHLDLAGASSRPK ddPTM_A549_MK2206_60min_R1 1 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.53)AS(0.441)APT(0.029)LAETEKETAEHLDLAGASSRPK 181.93 9.978299999999997e-67 61280000.0 894.9 992.05 996.59 546.01 1699.9 1134.1 790.91 852.91 1365.2 1608.0 1940.2 True False 1045.9372417956124 1042.541107611851 1137.9214476115199 679.7824745113204 1449.846961843914 1254.1097092453479 934.6081092951359 973.8126044273275 1055.9843797764224 1244.7516831954981 1458.3947932041103 0.7171838837258024 0.7148552041394608 0.7802561096035547 0.46611690996086896 0.9941388769350878 0.8599247028920436 0.6408471242836729 0.6677290737495366 0.724073059432976 0.8535080411667983 1.0 10.510165600416707 -10.595062749606177 0.781281908308554 1.0088840478375232 0.729586302156715 0.22343833605156393 0.13164575675625845 0.5750902400599702 0.5985323277698638 0.09721566480048552 0.023738602921144998 2.540605596306695e-11 10.595062749606177 -0.2792977456808081 S(ph)ASAPTLAETEKETAEHLDLAGASSRPK ddPTM_A549_PD325901_60min_R1 3 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.544)AS(0.456)APTLAETEKETAEHLDLAGASSRPK;S(0.701)AS(0.299)APTLAETEKETAEHLDLAGASSRPK;S(0.546)AS(0.454)APTLAETEKETAEHLDLAGASSRPK 213.73 2.3641999999999995e-90 168910000.0 4870.09 5524.16 6170.55 6580.28 6963.41 8252.8 7637.89 8145.299999999999 7428.5 7215.52 8624.5 True False 5364.497951629229 5989.700350241205 6589.320629531486 6986.728950699823 6474.324104060373 8185.591933007122 7928.554083563783 7982.835601635764 7116.305978304612 6759.930835791651 7563.741175209991 0.7092386991256738 0.791896524681771 0.8711721457534601 0.923713383212885 0.855968488884818 1.0822147061080347 1.048231807501486 1.0554083510682977 0.9408447239876692 0.8937284710306043 1.0 12.884884280997126 -5.757925531362548 0.8058632912096245 0.987724910675591 0.6539333204312435 0.6884541738589567 0.061993819706052895 0.5798462215698906 0.41088634451469014 0.009581976483481665 0.14744375786417493 1.7461215353657393e-06 5.757925531362548 -0.33379159024434746 S(ph)ASASHQADIK ddPTM_A549_MK2206_60min_R1 2 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.493)AS(0.493)AS(0.013)HQADIK;S(0.563)AS(0.425)AS(0.012)HQADIK 99.941 8.358700000000001e-05 135352000.0 8077.9 8726.4 7660.200000000001 7213.1 9698.9 7318.7 7442.5 7722.3 11676.2 13075.7 13142.0 True False 9441.252034306375 9170.536486531986 8746.531545564145 8980.309823808362 8272.204658055141 8093.15997624012 8794.705912719583 8816.9596735519 9031.559343059964 10121.890288531955 9878.478699251842 0.955739473834308 0.928334895050847 0.8854128061466158 0.9090782191481059 0.8373966184369711 0.8192718962741768 0.8902895051426957 0.8925422569590258 0.9142662162893543 1.0246405946391874 1.0 13.27007316634698 -10.011536138223665 0.711538638842371 0.995941238578597 0.887778994233548 0.5953196475537246 0.03753198494912343 0.387540538595087 0.3929939194195692 0.02057931306381916 0.008480457413504186 9.737867518615053e-11 10.011536138223665 -0.10816224434504895 S(ph)ASASHQADIK ddPTM_A549_PD325901_60min_R1 3 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.495)AS(0.495)AS(0.01)HQADIK;S(0.452)AS(0.452)AS(0.097)HQADIK;S(0.559)AS(0.434)AS(0.007)HQADIK 105.03 5.6233e-05 215266500.0 10219.0 10082.5 10086.9 11107.5 12841.400000000001 11754.3 10727.9 13204.5 11624.9 12345.8 13660.800000000001 True False 11256.425357169805 10932.187659536823 10771.457691457183 11793.585048037216 11939.46436442502 11658.576877925736 11136.156105032127 12941.12588877014 11136.345879678698 11566.284081052585 11980.608202946098 0.9395537493999501 0.9124902070371134 0.899074363253814 0.9843895108043937 0.9965657971762268 0.9731206196242047 0.9295150894170535 1.0801726982097493 0.929530929568351 0.9654171044678994 1.0 13.548413528836551 -6.266432310369849 24.443418618351405 0.9750396807589325 0.9165845156104676 0.33887432698160436 0.03967771213614812 294.6133793795929 1442317.1877039038 0.005829279275106897 0.013969655061033186 5.414616341302014e-07 6.266432310369849 -0.05845516514846494 S(ph)ASDSGCDPASK ddPTM_A549_MK2206_60min_R1 2 SASDSGCDPASK 12 0 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.978)AS(0.021)DS(0.001)GCDPASK;S(0.998)AS(0.002)DSGCDPASK 179.67 1.3628e-16 18318400.0 5778.7 6751.700000000001 5136.0 4887.0 5553.5 4614.299999999999 4645.5 4485.0 6320.7 6336.6 6582.7 True False 6754.003284349435 7095.332691157644 5864.362029453202 6084.315219385767 4736.587506676967 5102.582163275552 5489.527217674009 5120.7624847364505 4889.071542083821 4905.157659040171 4948.033916722347 1.3649872652496668 1.433970100160045 1.1851903459339754 1.2296429898799297 0.9572665803015663 1.0312342738862186 1.1094360527969773 1.0349085254711676 0.9880836761366455 0.9913346879985458 1.0 12.272639674087007 -6.20736243903593 1.0665671078208383 1.0046503754049982 1.4246601379789752 0.8347402718712823 0.06308938994824427 0.16107288565942443 0.30334836138236415 0.009108637251646505 0.05188058516861986 6.203511061608661e-07 6.20736243903593 0.42000976257397693 S(ph)ASDSGCDPASK ddPTM_A549_PD325901_60min_R1 1 SASDSGCDPASK 12 0 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.85)AS(0.069)DS(0.081)GCDPASK 94.287 0.00026218 8190000.0 3748.6 3567.1 3673.5 3632.0 4353.4 4754.9 4481.4 4766.5 5540.6 6054.4 6701.3 True False 4129.155112426534 3867.71203573854 3922.8058005500206 3856.340391129518 4047.6322024146834 4716.177670882073 4651.942129316176 4671.428418253085 5307.7478499555145 5672.124150749631 5877.082583040722 0.7025858585587827 0.6581006785406508 0.6674750175997042 0.6561657653505867 0.6887145356940848 0.8024691850496317 0.7915393502790162 0.7948549900818564 0.9031263003300114 0.9651258206099516 1.0 12.52088445545875 -8.382556791927014 0.47077464671689806 0.993400096485171 0.6508129240876689 0.9372722037116988 0.029792000458621685 0.1301862133567349 0.06754349847584816 0.011338674837294675 0.014642484855712852 4.144223872063292e-09 8.382556791927014 -0.34258717239750214 S(ph)ASDSGCDPASKK ddPTM_A549_MK2206_60min_R1 1 SASDSGCDPASKK 13 1 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.476)AS(0.476)DS(0.047)GCDPAS(0.002)KK 40.577 0.044129 6448800.0 2603.8 2530.1 2259.4 1662.6 2529.7 2218.6 2137.2 1844.0 3144.5 3230.4 3552.1 True False 3043.2577832019397 2658.8712830691456 2579.816894343179 2069.93707463695 2157.584481073327 2453.3707794125094 2525.5015756351086 2105.392647013158 2432.2757707346614 2500.6503963897626 2670.0155370272746 1.1397902899809427 0.9958261464011792 0.9662179334040428 0.7752528200422248 0.80807937300452 0.9188601135048181 0.9458752357849333 0.788531983359635 0.9109594071661071 0.9365677321765405 1.0 11.382632421753561 -5.356653894955049 1.991188336703884 0.9206045540631087 1.176965268168303 0.47316312641383007 0.07388716860688894 0.5091182166738577 2.489603412517654 0.012119652010171903 0.22002012952920938 4.3989204172922215e-06 5.356653894955049 0.25636071410519423 S(ph)ASEPSLHR ddPTM_A549_PD325901_60min_R1 1 SASEPSLHR 9 0 P04049;P04049-2;H7C155;P10398;Q96II5 P04049;P10398 RAF1;ARAF RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase A-Raf 1 S(0.624)AS(0.374)EPS(0.002)LHR 52.57899999999999 0.03916 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)ASFAFEFPKDR ddPTM_A549_MK2206_60min_R1 1 SASFAFEFPKDR 12 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 S(0.56)AS(0.44)FAFEFPKDR 72.321 0.00055664 10500000.0 1209.0 2047.6 1418.0 1152.7 1802.1 1414.6 1049.0 1230.2 2067.9 1749.2 2205.2 True False 1413.0496427879048 2151.8140939932728 1619.0937223062003 1435.1115517466687 1537.0134772274344 1564.2920330645163 1239.5897215240643 1404.5846173294938 1599.5239517577374 1354.0545051278398 1657.5879795761803 0.8524733891646583 1.2981598084123767 0.9767769447267455 0.8657830350058431 0.9272590632688016 0.9437158403287177 0.7478274075328468 0.8473665558847889 0.964970771667101 0.8168824350874279 1.0 10.694869730764495 -5.979031282797349 24.997241391247005 0.9426561595696558 1.090854576315782 0.16614717672172596 0.12526058631772521 281.3195071608261 335362.8895331009 0.015974743244561617 0.04966128617054546 1.0494668314665118e-06 5.979031282797349 0.14819841674612622 S(ph)ASFAFEFPKDR ddPTM_A549_PD325901_60min_R1 1 SASFAFEFPKDR 12 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 S(0.561)AS(0.439)FAFEFPKDR 79.875 0.00024156 8129200.0 2057.2 1833.9 1783.8 1943.8 2106.7 2835.4 2150.0 2094.1 2375.8 2117.5 2383.3 True False 2266.045429569402 1988.4491890726101 1904.8593948607931 2063.864111309902 1958.7326597204503 2812.309442473875 2231.819426525144 2052.3315327103305 2275.9533880670506 1983.800688625188 2090.169208983472 1.0841444892738925 0.9513340740674617 0.9113421950116651 0.9874148477738015 0.9371167900196252 1.345493671223684 1.0677697369824724 0.9818973142889502 1.0888847554949546 0.9491100912303579 1.0 11.02940402461411 S(ph)ASFFAVHSNPMDMPGR ddPTM_A549_PD325901_60min_R1 2 SASFFAVHSNPMDMPGR 17 0 J3KNG8;Q8TF40;Q8TF40-2 J3KNG8 FNIP1 Folliculin-interacting protein 1 1 S(0.536)AS(0.462)FFAVHS(0.001)NPMDMPGR;S(0.53)AS(0.468)FFAVHS(0.002)NPMDMPGR 58.913999999999994 0.0012415999999999998 10198500.0 3396.4 4093.7000000000003 3114.1 3167.0 4409.1 4022.6 3732.2 3303.8999999999996 4334.6 4492.7 4630.6 True False 3741.200027702468 4438.690465841402 3325.44155260455 3362.618397221143 4099.4200265692525 3989.84127928878 3874.2309133382055 3238.0011226405904 4152.431835977542 4209.0301552710225 4061.065555791915 0.921236058936982 1.0929866570390416 0.8188593626275711 0.8280138183008047 1.0094444352720768 0.982461677723583 0.9539936896149719 0.7973279618750637 1.0224981052215028 1.036434920206614 1.0 11.987642600831624 S(ph)ASFSVK ddPTM_A549_MK2206_60min_R1 2 SASFSVK 7 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.997)AS(0.003)FSVK;S(0.991)AS(0.009)FSVK 58.981 0.031423 4623800.0 2866.3 3019.8999999999996 2729.3999999999996 2927.1 4389.6 3804.2 2596.4 2954.9 4713.700000000001 4473.0 4458.1 True False 3350.0613656931114 3173.6000109641946 3116.469961680212 3644.239631402511 3743.8956548679575 4206.757918976416 3068.132271654033 3373.7661240017233 3646.054476232146 3462.5461933665833 3351.030732699331 0.9997107257188779 0.9470518965989273 0.9300033960505711 1.0874981228438312 1.1172370394383595 1.2553623808719225 0.9155786730677289 1.006784596476702 1.0880397009355884 1.0332779582052427 1.0 11.710389202392058 -6.2593743609806545 24.972477773115738 1.054054638550421 0.9577349926754576 0.23647822433205246 0.08213018154552876 226.9492302695925 2744497.648669531 0.01187922861214038 0.029892663004230956 5.503331058427548e-07 6.2593743609806545 -0.09631964587496344 S(ph)ASFSVK ddPTM_A549_PD325901_60min_R1 2 SASFSVK 7 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.998)AS(0.002)FSVK;S(0.964)AS(0.035)FS(0.001)VK 84.213 0.014159 7587900.0 3828.6000000000004 3981.0 3855.1000000000004 3320.5 4154.3 4611.1 4424.4 4412.5 4387.700000000001 4330.3 5137.4 True False 4217.276653533647 4316.4928413207135 4116.730268599533 3525.59974359735 3862.516299556972 4573.548730405334 4592.77296312458 4324.489225960712 4203.300227637764 4056.88411898638 4505.5323686618085 0.936021830154163 0.9580427989695607 0.913705624940887 0.7825045866099262 0.8572829986579767 1.015096187570777 1.019362993609717 0.9598175913771388 0.9329197714511569 0.9004228106769363 1.0 12.13748186800408 -7.25750596569039 24.96653688208057 0.9740534748263895 0.8887181400141263 0.36474416965034095 0.0536522541283037 291.5790497210541 1850734.2123878093 0.008182543253942734 0.013843714592126018 5.527058156434574e-08 7.25750596569039 -0.08533533481226319 S(ph)ASLSHPGGEGEPAR ddPTM_A549_MK2206_60min_R1 1 SASLSHPGGEGEPAR 15 0 C9JXU1;A6NN40;Q2M3G4-2;Q2M3G4 C9JXU1 SHROOM1 Protein Shroom1 1 S(0.516)AS(0.422)LS(0.061)HPGGEGEPAR 89.866 1.0287999999999999e-05 8421300.0 644.95 740.09 476.91 595.28 696.14 559.9 506.5 818.7 746.31 949.27 666.45 True False 753.8017924864015 777.7574198200247 544.543009241925 741.1236267231346 593.7387281710819 619.1482463684595 598.5244937578055 934.7532321635958 577.2719766121751 734.829247703352 500.9520719157196 1.5047383467319433 1.5525585448638985 1.0870161833236995 1.4794302055463333 1.1852206257986548 1.2359430793463715 1.1947739660382153 1.8659534206315431 1.1523497136254894 1.4668653727556198 1.0 8.968528771404543 -8.981772468144186 23.13203753331143 1.0672122225159233 1.377192098915908 0.030932677122769703 0.24024317010432333 43.893220678409484 55705.32552059848 0.03618954061203295 0.03676982653377198 1.042863654513179e-09 8.981772468144186 0.3099798763999848 S(ph)ASPDDDLGSSNWEAADLGNEER ddPTM_A549_PD325901_60min_R1 2 SASPDDDLGSSNWEAADLGNEER 23 0 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.532)AS(0.468)PDDDLGSSNWEAADLGNEER;S(0.512)AS(0.466)PDDDLGS(0.011)S(0.011)NWEAADLGNEER 78.991 2.2899999999999998e-05 28331800.0 1653.2 1180.7 1493.13 1551.9899999999998 1753.1999999999998 1773.96 1326.12 1348.87 1717.99 1605.54 1813.38 True False 1821.031646978485 1280.2017326670111 1594.4627807200904 1647.8528974749743 1630.0612802116555 1759.5134579145645 1376.5862222807084 1321.9657296819553 1645.788854771157 1504.1659303968295 1590.3457559629292 1.1450539231174162 0.804983273522096 1.0025887608035704 1.0361601502669622 1.0249728866190353 1.1063716498864153 0.8655892702069728 0.8312442276940752 1.0348622924293955 0.9458106356790827 1.0 10.635124739596275 S(ph)ASPERMD ddPTM_A549_MK2206_60min_R1 2 SASPERMD 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 1 S(0.933)AS(0.067)PERMD;S(0.954)AS(0.046)PERMD 72.321 0.0036275999999999995 33129000.0 2533.27 2802.0 2433.9 2220.38 2468.1 1966.27 1878.72 1584.35 2484.12 3592.9 3451.8999999999996 True False 2960.824043494884 2944.609831690345 2779.063618280015 2764.373199676644 2105.0457594723 2174.3393862956073 2220.0591054544216 1808.936464368382 1921.4707863245 2781.2613946225792 2594.697962406591 1.1411054721562697 1.1348564936472256 1.0710547657355942 1.0653930591261107 0.811287398368272 0.8379932530871147 0.8556136928536026 0.6971664874205965 0.7405373627928274 1.0719017916223859 1.0 11.34135089511462 -6.678343944944484 4.731749726957249 0.8524662837569696 1.109630742282055 0.5754671073869377 0.10102924388547835 0.12546652875743686 5.02786786650118 0.01580348513979773 0.03337351780968772 2.0972782600004324e-07 6.678343944944484 0.2571644585250854 S(ph)ASPERMD ddPTM_A549_PD325901_60min_R1 4 SASPERMD 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 1 S(0.964)AS(0.036)PERMD;S(0.969)AS(0.031)PERMD;S(0.998)AS(0.002)PERMD;S(0.994)AS(0.006)PERMD 107.21 0.00015629 46302400.0 3218.2999999999997 3819.58 3488.27 3432.21 4414.4 3762.03 2936.93 3455.86 3658.4 3826.4 3981.2 True False 3545.0194468127615 4141.469411417175 3725.004978871542 3644.209816585532 4104.347772853256 3731.3932749770697 3048.69647829976 3386.9301612302784 3504.650170428696 3584.8004509824896 3491.5376389061375 1.015317551588354 1.186144856429116 1.0668666255703168 1.0437263445131368 1.1755129680168952 1.0686962767916992 0.8731672957863015 0.9700397107250914 1.0037555177342057 1.0267111003006602 1.0 11.769646809774486 -7.538957498640095 24.97167008312602 0.9893287664688274 1.1001826189204877 0.4832823318065347 0.060414111808212906 157.76861565607774 245027.30406556436 0.008655603778479857 0.012840351906835063 2.8909627868070075e-08 7.538957498640095 0.11085385245166035 S(ph)ASPPK ddPTM_A549_PD325901_60min_R1 1 SASPPK 6 0 P52701;P52701-2;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 S(0.713)AS(0.287)PPK 77.282 0.04471 299270000.0 7889.8 7015.8 5542.3 5702.2 6309.7 4105.8 3803.0 3991.6 5920.5 6671.3 9928.7 True False 8690.766687836227 7607.046087952243 5918.433806557334 6054.4119433641945 5866.528439283303 4072.3637260736496 3947.7252460814525 3911.9844066503774 5671.681974093349 6250.072979468819 8707.532843214953 0.9980745228665098 0.8736166977400234 0.6796912412646334 0.6953073910116674 0.6737302683681055 0.4676828441993072 0.45336897570907037 0.4492643871792752 0.65135349773763 0.7177777094850667 1.0 13.088048294065125 -5.541230722866769 3.493873678758792 0.7288529932421849 0.98388882526265 0.20700085584208805 0.16774496252633184 0.3815233876416434 9.386496353610752 0.031365771893061785 0.17879379452287414 2.8758701768155188e-06 5.541230722866769 0.2550358320204651 S(ph)ASPPPATSSSSSSR ddPTM_A549_MK2206_60min_R1 2 SASPPPATSSSSSSR 15 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 S(0.997)AS(0.003)PPPATSSSSSSR;S(0.93)AS(0.047)PPPAT(0.003)S(0.003)S(0.003)S(0.003)S(0.003)S(0.003)S(0.003)R 67.275 0.002017 1116400.0 174.61 178.52 142.2 147.93 319.93 301.07 299.34 182.36 349.67 216.29 507.77 True False 204.0798991953648 187.6059054794292 162.3660982453749 184.17285664083008 272.8687208087084 332.9290275659086 353.7262032802794 208.2100884540777 270.470303308249 167.4299387800711 381.6766952609274 0.5346931099784563 0.4915309417861505 0.425402180068594 0.4825362903410258 0.7149210947295745 0.8722802091395881 0.9267691941171832 0.5455142822166233 0.7086371965240009 0.4386695359160197 1.0 8.576207289721129 -8.364879968482951 0.0865248046953734 1.4394667510124526 1.3048576822357463e-16 0.0 0.2043660084072115 6.98808374445318 0.4647582456317227 3.5240732509400403 3.880510838815807 4.316383577534766e-09 8.364879968482951 -1.4394667510124524 S(ph)ASPPPATSSSSSSR ddPTM_A549_PD325901_60min_R1 1 SASPPPATSSSSSSR 15 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 S(0.996)AS(0.003)PPPATSSSSSSR 58.486999999999995 0.0084165 1914000.0 224.23 230.73 291.61 288.43 272.14 294.04 351.85 312.07 300.79 190.76 187.49 True False 246.99366453059852 250.1744268470054 311.40040819338276 306.2456660279428 253.0258252320327 291.6454357286513 365.23984428970755 305.8455190358211 288.1488423254013 178.71538104469474 164.42991859703406 1.5021211871782423 1.5214653694508244 1.8938184172950123 1.862469243072816 1.5388064860149893 1.7736762154786587 2.2212493164628717 1.8600357018077236 1.7524112690924778 1.08687872967127 1.0 7.361329016072098 -10.46958667878569 0.8061546141837539 1.0003870065051184 1.7763559105671687 0.6607598274567723 0.19941704036889443 0.307640096032868 0.3611730173640064 0.14033261336858138 0.04093687756399989 3.391667900870591e-11 10.46958667878569 0.7759689040620503 S(ph)ASPSVPGPTKPKPK ddPTM_A549_MK2206_60min_R1 1 SASPSVPGPTKPKPK 15 2 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.538)AS(0.46)PS(0.002)VPGPTKPKPK 75.46300000000001 0.00022025 4924600.0 670.78 767.44 830.86 765.49 1265.3 1027.0 845.92 814.37 1482.9 1164.0 1042.0 True False 783.9912650035325 806.4994179987289 948.6884415481868 953.0350843641514 1079.1760461327751 1135.6764583325735 999.6127142341621 929.8094414035272 1147.025517704701 901.0515915668901 783.2426422630049 1.0009557992633862 1.0296929386639735 1.211231858887513 1.2167814071135978 1.3778310677962282 1.4499676052510238 1.276249096124292 1.1871282170197606 1.4644574437247526 1.1504118174203368 1.0 9.613315501839253 -5.784042949882926 2.724693198144279 1.2526464962266353 0.9992801281568925 0.35502020757723474 0.12791358855235968 0.3272702960858796 4.776894583424553 0.024948469603493006 0.11406157873804267 1.6442091098643766e-06 5.784042949882926 -0.2533663680697428 S(ph)ASSDTSEELNSQDSPPK ddPTM_A549_MK2206_60min_R1 1 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 S(0.499)AS(0.412)S(0.08)DT(0.004)S(0.004)EELNSQDSPPK 72.433 0.00076956 1677100.0 692.89 847.92 673.02 683.12 904.63 647.73 665.47 936.2 963.72 1283.6 928.76 True False 809.832892465932 891.0755062408555 768.4643561258948 850.4844306664226 771.5601253561147 716.2723586716237 786.377285016796 1068.9092169922546 745.4389587446045 993.633868501083 698.1232595280123 1.1600141972256366 1.2763870764645406 1.1007574173154449 1.2182439405348258 1.105191833713937 1.0259969839078011 1.1264161081646964 1.5311181835066254 1.0677755662353685 1.423292885518325 1.0 9.447337968631647 -8.979630445546498 24.999615106927163 1.0299007856585478 1.1901332356727756 0.0 0.17248527981649692 140.11270611738962 171962.9987521491 0.02218239881954506 0.022645244929869367 1.0480199609605698e-09 8.979630445546498 0.1602324500142278 S(ph)ASSFFK ddPTM_A549_MK2206_60min_R1 1 SASSFFK 7 0 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5;Q5TBH9;Q8NDD1-7 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 S(0.997)AS(0.003)SFFK 73.985 0.01879 4418100.0 2222.9 2437.9 2569.6 2221.1 3176.1 2391.9 2140.8 2418.8 3518.6 3284.4 3584.9 True False 2598.071175312847 2561.978696887186 2934.007918785622 2765.2695997089672 2708.899897354228 2645.0092703852793 2529.7556490359552 2761.672307264329 2721.6427180496053 2542.451758885132 2694.670391793328 0.9641517505166214 0.9507577270636671 1.088818850617575 1.026199570875403 1.005280610795382 0.9815706137718021 0.9387996605226288 1.0248646052129629 1.0100095085240934 0.9435112237208008 1.0 11.395893100049244 S(ph)ASSFFK ddPTM_A549_PD325901_60min_R1 1 SASSFFK 7 0 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5;Q5TBH9;Q8NDD1-7 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 S(0.999)AS(0.001)SFFK 67.89699999999999 0.023176 5094400.0 1471.3 1600.5 1500.0 1497.4 1644.9 1720.1 1633.5 1550.3 1821.9 1316.1 1755.7 True False 1620.6652928861865 1735.3797519552386 1601.7990202327555 1589.8909971578585 1529.3678985969382 1706.092075897338 1695.663736385498 1519.378050313178 1745.3318788279141 1233.001221392969 1539.760030299284 1.0525440724495083 1.1270455900962255 1.0402913367749993 1.0325576491609738 0.9932508108420467 1.1080246547026709 1.1012519503158624 0.986762885394457 1.1335090173036075 0.8007749240986012 1.0 10.588489810859246 -4.964400371339321 17.681807645550965 1.0607946110067583 1.0174422028816974 0.0 0.09347379041961874 14983432.974884637 187645719.7193194 0.007950414477038677 20879063.6564371 1.0854245212246279e-05 4.964400371339321 -0.043352408125060915 S(ph)ASSGAEGDVSSEREP ddPTM_A549_MK2206_60min_R1 1 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 S(0.367)AS(0.332)S(0.301)GAEGDVSSEREP 46.3 0.024916999999999998 2661700.0 983.84 1043.0 769.17 641.29 1030.3 631.88 537.91 781.64 1064.3 1166.1 1149.2 True False 1149.8881394213838 1096.0842449868064 878.2498719226088 798.4060787886016 878.7442348301574 698.7451221920028 635.6412841801803 892.4398636721063 823.23774933786 902.6772001083777 863.8219236935175 1.3311634121355804 1.2688775486273662 1.0167024566445366 0.9242716084060337 1.0172747538900555 0.8088995000315786 0.7358475939836236 1.033129443920831 0.9530178926437427 1.0449806555600296 1.0 9.754590122205906 -5.770093661538078 2.9286506950400404 0.9519990915636897 1.3240725011869972 0.6983125699320577 0.09044463440381441 0.1067001067782151 1.816942101831826 0.012660404889063247 0.056483143372115484 1.697877442508274e-06 5.770093661538078 0.3720734096233075 S(ph)ASSPSPR ddPTM_A549_MK2206_60min_R1 2 SASSPSPR 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.94)AS(0.008)S(0.051)PS(0.001)PR;S(0.992)AS(0.001)S(0.006)PSPR 107.69 0.0018082999999999999 63834000.0 7258.200000000001 5863.4 4823.3 3663.2 6485.2 4970.8 4068.0 4838.6 7080.1 10293.5 10452.1 True False 8483.206714047292 6161.822015393708 5507.316467418542 4560.684164447296 5531.235670892489 5496.806756650007 4807.102942955093 5524.486367591034 5476.468654596431 7968.191200853771 7856.5551067151255 1.0797616256514966 0.7842905614099364 0.7009836235618521 0.5804941354702909 0.7040281135640291 0.6996459239434083 0.6118588716887359 0.7031690470635362 0.6970572445823748 1.0142092930835842 1.0 12.939681151867175 -10.643708347333149 0.8654507932451472 1.0040126043168465 0.7194090837019134 0.4230859879427633 0.12384817878451172 0.4953625611839664 0.6468586068268419 0.09036457503069355 0.022963231856731815 2.2713897031163702e-11 10.643708347333149 -0.2846035206149331 S(ph)ASSPSPR ddPTM_A549_PD325901_60min_R1 2 SASSPSPR 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.971)AS(0.004)S(0.025)PSPR;S(0.951)AS(0.006)S(0.043)PSPR 106.6 0.0018934999999999998 93887000.0 7897.0 7973.9 6604.6 6011.1 8522.0 6101.299999999999 4566.4 6280.1 6382.6 8090.8 9820.9 True False 8698.697626535863 8645.888537404486 7052.827872686169 6382.391994801396 7923.444119303979 6051.613035679564 4740.17685082996 6154.838478856858 6114.361518089384 7579.945507215438 8612.991559814456 1.0099507895864295 1.0038194600983377 0.8188592574027906 0.7410191860142595 0.9199410058953627 0.7026145322044097 0.5503519674797028 0.7145993858363247 0.7098998618107436 0.8800595535912411 1.0 13.072298702179378 -5.762795225011512 6.6457970320450865 0.8123068978104783 1.0085289861319995 0.32174588382292035 0.11953600458465378 0.1603014282962216 33.29340671311085 0.020954669311936604 0.07366674420737189 1.7266518368603791e-06 5.762795225011512 0.19622208832152122 S(ph)ATFPNAGPR ddPTM_A549_PD325901_60min_R1 1 SATFPNAGPR 10 0 Q86X27;Q86X27-3 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.787)AT(0.213)FPNAGPR 153.88 1.8318000000000002e-08 72301000.0 7018.3 7478.0 8013.4 8641.2 9284.2 8837.3 8542.5 9992.4 9861.2 9913.5 9799.4 True False 7730.79264940061 8108.197304043278 8557.237512488775 9174.947298410912 8632.109820751224 8765.331958797473 8867.589512135368 9793.093743113848 9446.76805724674 9287.559918151503 8594.13592351472 0.8995427484743538 0.9434569543935362 0.9957065595245026 1.0675822886751203 1.0044185823420133 1.0199200986354355 1.0318186250548402 1.1395088267476219 1.0992109202507612 1.0806857141669683 1.0 13.06913687939436 -5.532829354416441 0.9573942135961021 1.0514321252508332 0.8491844734621535 0.6298205776637513 0.04014808887491532 0.848591232435299 0.7746885901033329 0.007448405185874799 0.15961476957297488 2.932045095623015e-06 5.532829354416441 -0.20224765178867965 S(ph)ATLGKIPK ddPTM_A549_MK2206_60min_R1 1 SATLGKIPK 9 1 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;E9PNV5;Q8IVL1-5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 S(0.924)AT(0.076)LGKIPK 44.765 0.046971 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)ATPVNCEQPDILVSSTPINEGQTVLDK ddPTM_A549_PD325901_60min_R1 2 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 A0A2R8Y7M0;P82094;P82094-2;F8WF45 A0A2R8Y7M0 TMF1 TATA element modulatory factor 1 S(0.528)AT(0.472)PVNCEQPDILVSSTPINEGQTVLDK;S(0.538)AT(0.462)PVNCEQPDILVSSTPINEGQTVLDK 134.78 8.094299999999999e-28 12135300.0 1487.6 1701.3200000000002 1776.24 1521.34 1816.12 1280.3400000000001 1758.1799999999998 1927.22 1927.83 1566.81 1625.31 True False 1638.6200568867598 1844.69620718306 1896.7863277988208 1615.3097165861748 1688.561996473872 1269.913335535374 1825.0885020130115 1888.7800852251578 1846.810009309412 1467.881349206533 1425.4071736889725 1.149580335453195 1.2941538679147813 1.3306978965806049 1.1332268746801182 1.1846172992828787 0.8909126872490908 1.2803980053570647 1.3250810856640844 1.2956368140970158 1.0297979246222235 1.0 10.47715837485405 -10.91442902363073 1.1919421975214826 1.0010370262903692 1.215675743617198 0.27654924196703634 0.12070010375231223 0.4964052596356416 1.2626101138615922 0.08609199555376727 0.02082974670210064 1.217785998289198e-11 10.91442902363073 0.21463871732682893 S(ph)ATREPPYR ddPTM_A549_MK2206_60min_R1 2 SATREPPYR 9 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.948)AT(0.052)REPPYR;S(0.973)AT(0.027)REPPYR 120.57 3.841e-05 67715000.0 6879.9 8560.099999999999 6723.0 5903.8 8684.9 7075.700000000001 6778.7 6642.200000000001 9367.7 10420.8 10495.7 True False 8041.058922594293 8995.772526856714 7676.422492993361 7350.23126503165 7407.3627148174655 7824.445877530469 8010.302045085962 7583.752190884382 7245.930907142982 8066.7340424400845 7889.328023416343 1.019232423690281 1.1402457218354123 0.9730134772199791 0.9316675949099089 0.938909206567612 0.9917759604248554 1.0153338815816195 0.9612671913723222 0.9184471586979661 1.0224868351901686 1.0 12.945686708022416 -5.846026037918435 7.963073520098622 0.9632157393214441 1.0792174422310485 0.48267202527199937 0.041956238419407495 0.12259209778393225 9.958052151663354 0.005719868195001255 0.01796579170832442 1.42552212454131e-06 5.846026037918435 0.11600170290960443 S(ph)ATREPPYR ddPTM_A549_PD325901_60min_R1 2 SATREPPYR 9 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.994)AT(0.006)REPPYR;S(0.998)AT(0.002)REPPYR 91.939 0.00028417 85317000.0 13401.3 14473.599999999999 14093.2 13165.2 16589.1 14206.099999999999 14613.0 14360.4 14525.0 16153.900000000001 17123.3 True False 14761.79011048436 15693.341067103616 15049.649301296178 13978.384503661435 15423.938845288138 14090.410231617441 15169.105711540431 14073.970556484137 13914.564762048125 15133.939997158177 15017.242653542013 0.9829893843396477 1.045021474924502 1.0021579625835322 0.9308223104701882 1.0270819484727578 0.9382821172097152 1.0101125793530812 0.9371873972592837 0.9265725461768571 1.0077708901899272 1.0 13.874332320547849 -6.017015521229415 23.453916346219398 0.9664553278262501 1.0164015059262332 0.16504965440820674 0.0367546233518044 329.14944395096416 453698.52287497843 0.005116014156504138 0.013937293255381008 9.615779119832221e-07 6.017015521229415 0.04994617809998314 S(ph)ATREPPYRVPR ddPTM_A549_MK2206_60min_R1 1 SATREPPYRVPR 12 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.534)AT(0.462)REPPY(0.003)RVPR 43.813 0.013887 4537500.0 185.2 421.88 294.94 299.48 500.64 244.04 266.44 390.9 528.11 451.35 545.49 True False 216.45723229472287 443.35189000482626 336.76692697954195 372.8526134441681 426.9965191937976 269.86415081935877 314.8486991447775 446.311272081043 408.4939282183758 349.389721523811 410.02977824188764 0.5279061272643201 1.0812675408742656 0.821323096150529 0.9093305736058328 1.0413792896327174 0.6581574440190016 0.7678678863149295 1.0884850217335968 0.9962542963828207 0.8521081640019241 1.0 8.679584878436788 -8.259753702781305 24.985330789205126 1.0049508096976691 0.8435828397921282 0.17587429070342564 0.15685599234300193 169.95091431032967 2519036.5179015454 0.022506923392354564 0.02828463945926567 5.498526180350551e-09 8.259753702781305 -0.16136796990554092 S(ph)ATREPPYRVPR ddPTM_A549_PD325901_60min_R1 1 SATREPPYRVPR 12 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.5)AT(0.5)REPPYRVPR 45.614 0.015468 6988600.0 2331.1 2257.8 2338.4 2281.2 2205.8 2241.6 2567.6 2154.9 2688.1 2988.9 3310.1 True False 2567.7515559348785 2448.072729749788 2497.0978859415163 2422.1045430189056 2050.872217596891 2223.345152800111 2665.311423044631 2111.9188290136535 2575.128505119555 2800.180343911135 2902.978684452731 0.8845230485799969 0.8432968326156683 0.8601847127969073 0.8343514735367477 0.7064716763442309 0.7658840778637186 0.9181298634120335 0.7275006324794259 0.887064214047103 0.9645886684968975 1.0 11.503318263465367 -9.655104583931761 0.8368345950042222 0.9849406050973801 0.8178189607905059 0.47868837932767794 0.0637495392503383 0.30099917439393503 0.4452932501320954 0.02243958400649864 0.013605865388998526 2.2125618309038793e-10 9.655104583931761 -0.16712164430687426 S(ph)ATTT(ph)VMNPK ddPTM_A549_PD325901_60min_R1 1 SATTTVMNPK 10 0 D3DSM0;A0A494C0X7;P05107 D3DSM0 ITGB2 Integrin beta;Integrin beta-2 2 S(0.874)AT(0.111)T(0.111)T(0.903)VMNPK 40.431999999999995 0.051213999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)AVDLSCSR ddPTM_A549_MK2206_60min_R1 2 SAVDLSCSR 9 0 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(1)AVDLSCSR;S(1)AVDLSCSR 160.81 7.9767e-06 55399000.0 11202.9 11879.0 11536.099999999999 10009.2 13360.6 11054.7 10976.7 10591.3 15457.599999999999 14182.0 16903.2 True False 13093.67563539175 12483.590360688666 13172.092447035651 12461.454449330064 11395.273438679802 12224.501016484037 12971.024305293806 12092.649209495907 11956.478280714939 10978.276350173237 12705.668935412703 1.0305380772906503 0.9825213000706268 1.0367098744657948 0.9807790925984247 0.8968652887625128 0.9621296665783904 1.020884801204092 0.9517522667218085 0.9410349302735528 0.8640455221979734 1.0 13.633184712783878 -6.507299982434014 24.261423107627436 0.9675173347169859 1.0124431798739475 0.2456992093086785 0.04511786217387098 532.3062417716355 828979.8857801278 0.0050420952931288536 0.01138864357647142 3.109567707623036e-07 6.507299982434014 0.04492584515696163 S(ph)AVDLSCSR ddPTM_A549_PD325901_60min_R1 2 SAVDLSCSR 9 0 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(1)AVDLSCSR;S(1)AVDLSCSR 135.8 4.5067e-05 78968000.0 13877.7 13297.9 14962.5 14486.400000000001 13286.900000000001 15233.699999999999 13477.599999999999 14998.9 12516.4 13700.3 18273.4 True False 15286.55388777723 14418.560701984105 15977.945226821736 15381.192026998535 12353.673981316597 15109.64179791713 13990.497443225706 14699.735173090578 11990.379234953469 12835.260719892172 16025.887644626602 0.9538662835255015 0.8997043422314629 0.9970084391661799 0.9597716125356569 0.770857393690684 0.942827138999899 0.8729936059371194 0.9172493592278068 0.7481881503751701 0.8009079437291431 1.0 13.968116646848078 S(ph)AVFPGEGK ddPTM_A549_MK2206_60min_R1 2 SAVFPGEGK 9 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)AVFPGEGK;S(1)AVFPGEGK 127.83 5.1679e-05 41208000.0 11242.5 9849.4 9309.7 8698.2 17466.2 12489.3 11167.5 12338.7 17388.0 13903.1 14645.2 True False 13139.95914726469 10350.692389811164 10629.95544890975 10829.259390477038 14896.94511733523 13810.909436273627 13196.49019553859 14087.748510683976 13449.645762930297 10762.380053877694 11008.392653042389 1.1936310378275978 0.9402546507959583 0.9656228464899415 0.9837275732969206 1.3532352621177772 1.2545800164982948 1.1987663059866853 1.279728017949155 1.2217629027988222 0.9776522688717227 1.0 13.42631621441269 S(ph)AVFPGEGK ddPTM_A549_PD325901_60min_R1 2 SAVFPGEGK 9 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)AVFPGEGK;S(1)AVFPGEGK 98.353 0.00083689 55888000.0 14083.0 13412.3 12656.400000000001 13531.0 13266.5 13612.8 13252.8 13460.8 14888.400000000001 14863.7 18555.2 True False 15512.695792643344 14542.601591470937 13515.33941311591 14366.779138869375 12334.706806940412 13501.941870109462 13757.142556210423 13192.31378420669 14262.692323805668 13925.203445345081 16273.028031103995 0.9532765360566353 0.8936629104106777 0.830536233777937 0.8828583783797922 0.7579847329804913 0.8297129362956959 0.8453953701742078 0.8106858636875154 0.8764621001416697 0.8557229434330648 1.0 13.990195107449368 -10.157829805145308 0.7632947383675154 0.9951313140997557 0.8491169492331546 0.024332063149491878 0.06286342282361736 0.3492441649321942 0.3964370337679229 0.02661456202580317 0.010161749810410521 6.952967427492247e-11 10.157829805145308 -0.14601436486660113 S(ph)AVKKAESER ddPTM_A549_MK2206_60min_R1 1 SAVKKAESER 10 2 Q5TZA2;Q5TZA2-2;B1AKD8 Q5TZA2 CROCC Rootletin 1 S(0.993)AVKKAES(0.007)ER 48.659 0.0063111999999999994 103020000.0 4359.6 3651.9 3840.0 3368.0 5083.6 4142.8 3689.3 3775.2 6097.9 5574.9 5124.9 True False 5095.393898013361 3837.766111473938 4384.569741647253 4193.160151195263 4335.809174204199 4581.1883462319265 4359.59805492729 4310.346161065112 4716.735386345334 4315.526218063796 3852.2458899555427 1.3227073358165526 0.9962412112582534 1.1381853253655763 1.0884975339005825 1.1255276267565144 1.1892253187100672 1.131702954449152 1.1189177129902412 1.2244118161418216 1.1202623979212292 1.0 11.911484078419138 -11.010083444373132 1.293680566260351 1.000021081621416 1.1499943660493233 0.08257538179655965 0.08484799169317404 0.4027610153471212 1.2004807061736853 0.05276355822655395 0.011980779763448838 9.770494748128801e-12 11.010083444373132 0.14997328442790736 S(ph)AVKKAESER ddPTM_A549_PD325901_60min_R1 3 SAVKKAESER 10 2 Q5TZA2;Q5TZA2-2;B1AKD8 Q5TZA2 CROCC Rootletin 1 S(0.994)AVKKAES(0.006)ER;S(0.993)AVKKAES(0.007)ER;S(0.999)AVKKAES(0.001)ER 51.013000000000005 0.005345600000000001 371598900.0 4807.79 5219.06 5755.27 5388.030000000001 5964.09 5077.1900000000005 5837.59 5712.83 5262.48 5583.339999999999 6213.79 True False 5295.873301492064 5658.888502492662 6145.857231449985 5720.836375996031 5545.19289339353 5035.84304797698 6059.742681901817 5598.88312402156 5041.316266367157 5230.806959541237 5449.533222460207 0.9718031041016806 1.0384171031694236 1.1277768169427584 1.0497846590635782 1.0175537366281322 0.9240870442300992 1.1119746287492362 1.0274059989112112 0.925091390504679 0.9598633031509026 1.0 12.411916946389873 -8.65256647255524 7.533622737483497 0.9647153017958461 1.03635053669986 0.24758500663973715 0.05579360574918823 0.24946183743155617 15.8993553820772 0.0099603425761571 0.0112894974528633 2.2255303819029823e-09 8.65256647255524 0.07163523490401391 S(ph)AVLLVDETATTPIFANR ddPTM_A549_PD325901_60min_R1 1 SAVLLVDETATTPIFANR 18 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(1)AVLLVDETATTPIFANR 373.42 1.9585999999999985e-273 38363000.0 9228.2 11117.0 12739.0 13702.0 14563.0 13620.0 13992.0 13844.0 12793.0 13768.0 13620.0 True False 10165.040070558218 12053.8686051149 13603.545145830045 14548.341420500188 13540.145119622593 13509.08323569661 14524.473216716191 13567.870559592098 12255.35469885588 12898.686130338428 11944.826344293586 0.8509994015454543 1.0091288276345187 1.1388650411254309 1.2179617351616319 1.1335573016589848 1.1309568549860347 1.2159635308264638 1.1358784270709712 1.0259968915086524 1.0798554753791403 1.0 13.544098259375708 -8.845142738619106 5.456888812441776 1.0114370592953252 1.1114323800307697 0.07190376503640539 0.0989448196576819 0.2753000141422985 13.541402871485392 0.01766914178886182 0.018762434936519932 1.4284244042215974e-09 8.845142738619106 0.09999532073544448 S(ph)AVPPGADK ddPTM_A549_MK2206_60min_R1 2 SAVPPGADK 9 0 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 1 S(1)AVPPGADK;S(1)AVPPGADK 80.979 0.0016297 17472800.0 5663.9 6039.3 6049.200000000001 4973.4 7470.700000000001 5130.4 5733.2 4709.7 8580.2 8785.4 9022.3 True False 6619.827850939964 6346.674574064064 6907.067521138696 6191.883223264407 6371.769926376446 5673.295522716102 6774.848228257161 5377.314397851335 6636.798399763887 6800.772038274707 6781.81390718763 0.9761146415303453 0.9358373233063223 1.0184690431889198 0.9130128470057264 0.9395377127088959 0.8365454434990206 0.9989728885183525 0.7929020865866355 0.9786170028537571 1.0027954366407759 1.0 12.72745548205094 -8.974417839389668 24.999474309062794 0.9905664119850289 0.9265022062542368 0.18968939871956925 0.06236992066384838 208.79045384502092 204036.87232169454 0.010253626255153924 0.010659862543104186 1.060674579715469e-09 8.974417839389668 -0.06406420573079208 S(ph)AVPPGADK ddPTM_A549_PD325901_60min_R1 2 SAVPPGADK 9 0 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 1 S(1)AVPPGADK;S(1)AVPPGADK 72.652 0.0025533 35223000.0 14278.2 15111.6 15225.5 16247.3 17412.9 17507.4 14442.0 17243.8 16581.4 17366.3 19564.4 True False 15727.7123529447 16385.107566164817 16258.793988369212 17250.85882070448 16189.877975243871 17364.825538959973 14991.59821296563 16899.858881500582 15884.541421371756 16269.788854248702 17158.102828949883 0.9166346949738658 0.9549486752415987 0.9475869302366391 1.0054059584954869 0.9435704014972809 1.0120481099845897 0.873732857438712 0.9849491549255912 0.9257749285993717 0.9482277275316021 1.0 14.066602422446504 -11.011879164847398 1.290292697830577 1.000047003663324 0.9504288613099711 0.0 0.04063350953648467 0.5809114930545328 1.7193673913902074 0.02518117624527001 0.005685826652795685 9.730179120258285e-12 11.011879164847398 -0.049618142353352934 S(ph)AVS(ph)SAQAST(ph)NRK ddPTM_A549_PD325901_60min_R1 1 SAVSSAQASTNRK 13 1 F6VGH2 F6VGH2 KIF6 3 S(0.756)AVS(0.622)S(0.622)AQAS(0.009)T(0.992)NRK 54.729 0.0086153 35844000.0 7687.4 7464.5 9759.6 7939.2 9761.3 10202.0 9249.0 8875.1 10261.0 6563.7 6891.2 True False 8467.819188835223 8093.559611665029 10421.945145242405 8429.58635276858 9075.69996265687 10118.918294462317 9600.975756246993 8698.079168118742 9829.765853588688 6149.2668618319485 6043.626086916004 1.4011156658363453 1.3391893368762466 1.7244523395987605 1.3947895239611199 1.5016977940288327 1.6743124324598793 1.5886118065828698 1.4392153060146176 1.626468234834943 1.0174797006625953 1.0 12.561198689830771 -10.794528667598739 0.9085133771380071 0.9811604508544197 1.5275748896297583 0.7347286639007145 0.1183402431285508 0.2565041212990018 0.3542726180021775 0.09686023791050648 0.02114163283031032 1.6049863101190617e-11 10.794528667598739 0.5464144387753386 S(ph)AYAFSHQR ddPTM_A549_MK2206_60min_R1 2 SAYAFSHQR 9 0 O43520 O43520 ATP8B1 Phospholipid-transporting ATPase IC 1 S(0.786)AY(0.21)AFS(0.004)HQR;S(0.866)AY(0.131)AFS(0.003)HQR 67.385 0.0015183 4536300.0 1563.06 1492.17 1401.63 884.8299999999999 1660.45 1236.3200000000002 1134.6299999999999 1367.73 2026.58 1821.9 2197.0299999999997 True False 1826.8663148519965 1568.1150794266184 1600.402210152355 1101.6133897215282 1416.2000045848142 1367.1465617972026 1340.7775841113903 1561.609915997455 1567.5628657832576 1410.331524635496 1651.4468160567083 1.1062217063787445 0.9495401633162686 0.9690909780393434 0.6670595619615161 0.8575510823693301 0.827847768698751 0.8118805710697194 0.9456010940311332 0.9492057815862657 0.8539975438040792 1.0 10.689514793827321 -8.475184878694392 5.566673172823624 0.974814721516054 0.8781061366625587 0.015148392645082054 0.11005195850081488 0.3035892158429799 22.41519843293667 0.017641461659914908 0.021134711100634435 3.3482287507706574e-09 8.475184878694392 -0.09670858485349532 S(ph)AYAFSHQR ddPTM_A549_PD325901_60min_R1 2 SAYAFSHQR 9 0 O43520 O43520 ATP8B1 Phospholipid-transporting ATPase IC 1 S(1)AYAFSHQR;S(1)AYAFSHQR 156.58 3.9688e-06 11284000.0 1457.29 1429.0900000000001 1361.21 1766.58 1609.3 1389.47 1461.69 1342.3899999999999 1470.04 1524.26 2141.79 True False 1605.2330079998042 1549.5244296917908 1453.5898962206857 1875.6976344057246 1496.2683197836056 1378.1546169973105 1517.315412817459 1315.6149783654173 1408.2593310018046 1428.0179634681617 1878.363407925445 0.8545912900702749 0.8249332494201217 0.7738597813860206 0.9985807999088607 0.7965808498346741 0.7336996723756511 0.8077858663639829 0.700404923144476 0.7497267701552779 0.7602458381817252 1.0 10.875260493602427 -10.820455756478854 1.089040462485551 0.9990027771807125 0.8017050732363378 0.0 0.10154801366047826 0.35326636018192 0.7497168446638703 0.052202251801732595 0.01319605213163426 1.511973723040238e-11 10.820455756478854 -0.19729770394437474 S(ph)CFES(ph)SPDPELK ddPTM_A549_MK2206_60min_R1 2 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.885)CFES(0.558)S(0.558)PDPELK;S(0.995)CFES(0.55)S(0.455)PDPELK 56.951 0.017586 3007700.0 2977.8999999999996 2996.2 2628.2 2724.2 4000.7 2521.39 3395.0 3232.3 4789.1 3796.8999999999996 3722.5 True False 3480.496717335069 3148.693782195081 3000.9182799472164 3391.629122293983 3412.2023296952448 2788.2018162367744 4011.8275544081957 3690.488423503596 3704.3764966212043 2939.1776529384256 2798.100514226523 1.243878373789292 1.1252968812900104 1.0724840886485303 1.2121184014118696 1.2194709633719063 0.9964623508199866 1.4337682059706789 1.3189263233182156 1.3238897165369352 1.0504188959598189 1.0 11.450232073030207 -5.220419601019209 19.601393244715233 1.1752941899089588 1.243881388340269 0.020517775817335382 0.13624830999037482 5133.908888220833 2452392.841977229 0.02107852475684113 4.842337002480655 6.019776940032634e-06 5.220419601019209 0.06858719843131023 S(ph)CFESS(ph)PDPELK ddPTM_A549_PD325901_60min_R1 1 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.914)CFES(0.143)S(0.944)PDPELK 78.529 0.0011288000000000001 6535200.0 3370.8 3778.3 3443.8 3517.3 4208.2 3858.4 3422.7 4358.1 3141.6 3828.3 4102.4 True False 3713.0011345481926 4096.710600945005 3677.516977251708 3734.5556326321193 3912.630549501875 3826.9784696484435 3552.952721473304 4271.174276636689 3009.5694772082884 3586.5804846582346 3597.830807256239 1.0320110459501524 1.1386612713089808 1.0221483928134572 1.038002016409479 1.087497094530053 1.063690505381757 0.9875263490177405 1.187152622080623 0.8364955548044329 0.996873026220323 1.0 11.812911628207653 -8.769776893613605 24.99985616014359 0.9227895729252308 1.0669197873846397 0.3987756690228481 0.06694354138229916 121.76162764610169 365098.739458396 0.012744175772923414 0.013675711918458872 1.69911630076533e-09 8.769776893613605 0.14413021445940888 S(ph)CPEAEVFTDH ddPTM_A549_MK2206_60min_R1 1 SCPEAEVFTDH 11 0 Q9HCM4-4 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 S(1)CPEAEVFTDH 78.655 0.0010332000000000002 359030.0 114.44 106.81 238.5 225.99 286.78 114.17 342.92 237.51 251.89 185.59 247.56 True False 133.75467421062686 112.24617277760379 272.32288629762274 281.35756014507666 244.59504189516878 126.25139362008757 405.2241251716228 271.17776984386927 194.83731718567464 143.66509010214708 186.08401969158308 0.7187864623319765 0.6032015697191052 1.4634404757000228 1.5119920593471734 1.314433352743359 0.6784644583094104 2.177640647720551 1.4572867153951272 1.0470394905946214 0.7720442106756861 1.0 7.539810356393661 -5.745245339953798 24.993074306131696 1.1799383556224614 0.6609936497820953 0.2330870155566812 0.3995028551850412 293.43044579295486 452858.30500094465 0.05426451754930809 0.20885222620851182 1.7978549909334313e-06 5.745245339953798 -0.5189447058403661 S(ph)CPEAEVFTDH ddPTM_A549_PD325901_60min_R1 2 SCPEAEVFTDH 11 0 Q9HCM4-4 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 S(1)CPEAEVFTDH;S(1)CPEAEVFTDH 96.113 0.00028284 1263120.0 525.62 559.38 711.14 798.36 589.78 714.21 560.69 614.48 415.81 683.98 941.28 True False 578.9805554590072 606.5209157442807 759.4022368322147 847.6728839928868 548.3558874305439 708.393710555571 582.0273647713409 602.2237143497653 398.33495171822557 640.7933860712427 825.5085272655408 0.7013622952834343 0.7347239861390088 0.919920523834805 1.0268493370998413 0.6642643526008722 0.858130094551649 0.7050531224665599 0.7295184658414174 0.48253281288043365 0.7762407835977678 1.0 9.689139307614855 S(ph)CQKSPAQQEPPQR ddPTM_A549_PD325901_60min_R1 2 SCQKSPAQQEPPQR 14 1 A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2 A0A669KBI3 AFF1 AF4/FMR2 family member 1 1 S(0.946)CQKS(0.054)PAQQEPPQR;S(0.5)CQKS(0.5)PAQQEPPQR 48.053000000000004 0.0084887 26002000.0 2268.9 1942.35 2108.38 2112.13 2185.6 2028.68 2320.71 2319.5 1617.46 2246.01 2739.1 True False 2499.2370577241004 2106.0386511779175 2251.467345518891 2242.591473104734 2032.0909959106746 2012.1591026867106 2409.025888991239 2273.2357528874513 1549.4837810686645 2104.196545293535 2402.208064585504 1.0403915857951873 0.8767095083170117 0.9372490995726371 0.9335542187898236 0.8459263066629108 0.8376289849122226 1.002838148995604 0.9463109321796792 0.6450248019361406 0.875942669710673 1.0 11.230145398547311 -2.0000050013852597 0.44921598641844246 0.8503657522004832 4.583745510715431 0.10194089436504494 0.09804088454226856 129.59508388374607 1.383158512523396 0.02760479318417307 447.7882730005375 0.009999884839511669 2.0000050013852597 3.733379758514948 S(ph)CSVTDAVAEQGHLPPPSAPAGR ddPTM_A549_MK2206_60min_R1 2 SCSVTDAVAEQGHLPPPSAPAGR 23 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.49)CS(0.49)VT(0.02)DAVAEQGHLPPPSAPAGR;S(0.492)CS(0.492)VT(0.017)DAVAEQGHLPPPSAPAGR 124.08 2.9773e-16 18964500.0 3948.8 4045.5 4311.5 4378.5 5397.3 4497.0 4173.6 3758.7999999999997 5358.4 6322.2 6442.4 True False 4615.260901109082 4251.398670272411 4922.9355315396215 5451.232696558336 4603.364319760077 4972.869555132992 4931.889096046553 4291.621410842221 4144.73095560649 4894.010629041404 4842.574278805361 0.9530593926682408 0.8779212099811529 1.0165947382750493 1.1256890204899712 0.9506027279556162 1.026906200881192 1.0184436648978414 0.8862272757746821 0.8558941416235694 1.0106216956673573 1.0 12.241558462730115 -8.251976390987002 24.667329190619547 0.9266194092217233 0.9963601834021498 0.12369910429472408 0.07111278141230669 834.530955357982 2175387.3520408836 0.012738703177113782 0.016332342834640124 5.597880317313919e-09 8.251976390987002 0.06974077418042657 S(ph)CSVTDAVAEQGHLPPPSAPAGR ddPTM_A549_PD325901_60min_R1 1 SCSVTDAVAEQGHLPPPSAPAGR 23 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.546)CS(0.44)VT(0.014)DAVAEQGHLPPPSAPAGR 157.66 2.1695999999999997e-33 15665000.0 2004.7 2766.6 2673.1 2884.2 3012.8 2899.6 2537.4 2849.4 2753.6 3549.9 2785.8 True False 2208.2156682178597 2999.751091383546 2854.51264065612 3062.3504835065437 2801.191321595753 2875.986618959315 2633.962145518558 2792.566481688942 2637.8757679019404 3325.758708170274 2443.1642606411942 0.903834303649451 1.2278139213596218 1.1683670585075479 1.2534361822658815 1.1465423617733326 1.1771564709302553 1.078094579210687 1.143012169372537 1.079696445465212 1.3612505559889976 1.0 11.25453514787673 -9.298078004909526 0.6300542745672979 1.009042262641155 1.1525972369574384 0.0 0.136817472389111 0.5837650204135105 0.5172299160509333 0.03187574704278207 0.021706803718395038 5.034101816835175e-10 9.298078004909526 0.1435549743162834 S(ph)DAEEDGGTVS(ph)QEEEDRKPK ddPTM_A549_MK2206_60min_R1 2 SDAEEDGGTVSQEEEDRKPK 20 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 S(1)DAEEDGGT(0.038)VS(0.962)QEEEDRKPK;S(1)DAEEDGGT(0.02)VS(0.98)QEEEDRKPK 212.07 5.916199999999999e-67 19226100.0 2139.78 2650.8 2377.0 2483.8 3935.2 2684.4 2502.3999999999996 2275.3 3866.3 3305.0 3507.0 True False 2500.9225514017403 2785.7143975177605 2714.0943426811273 3092.331111502019 3356.33729292792 2968.461426239494 2957.0536884097396 2597.8307428140115 2990.5892232124106 2558.398204577813 2636.115111723952 0.9487152288149514 1.0567499063786991 1.0295811175355611 1.1730637625607 1.273213479184132 1.1260742799270993 1.1217467990143655 0.9854769737711099 1.1344683735213072 0.9705183939804077 1.0 11.364197654813557 -5.2067724190755005 1.6815996154393658 1.0873271741136403 0.8899188806944109 0.18759949150899735 0.0859955399054757 1.6093465675142449 3.914045458288003 0.01279787392983621 0.532659083282543 6.211944700413614e-06 5.2067724190755005 -0.19740829341922939 S(ph)DAEEDGGTVS(ph)QEEEDRKPK ddPTM_A549_PD325901_60min_R1 1 SDAEEDGGTVSQEEEDRKPK 20 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 S(1)DAEEDGGT(0.149)VS(0.851)QEEEDRKPK 185.96 2.9451999999999997e-44 15545000.0 2757.8 3346.7 3271.2 3222.0 2877.2 3398.2 2988.8 3656.9 3700.9 3581.3 3737.0 True False 3037.7698258149417 3628.7381542446697 3493.203303323593 3421.0156223070794 2675.1153978011507 3370.526185869621 3102.5404195341152 3583.9602607174456 3545.36404322643 3355.176106811517 3277.3726907947967 0.9268917857121252 1.1072094926636686 1.065854766269031 1.043828683846587 0.8162377764710085 1.0284232230702555 0.9466547482525454 1.0935467518795667 1.0817701792610723 1.0237395692699973 1.0 11.67832402485702 -8.260367011217257 24.999884678711368 1.0438125864334746 0.9948790539868257 0.11496706088384478 0.07762043585238189 208.40259551188512 4858452.668023243 0.01301349716331547 0.01629499533309456 5.490766670189673e-09 8.260367011217257 -0.048933532446648886 S(ph)DAEEDGGTVSQEEEDR ddPTM_A549_MK2206_60min_R1 1 SDAEEDGGTVSQEEEDR 17 0 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 S(0.971)DAEEDGGT(0.024)VS(0.005)QEEEDR 86.641 1.4223e-05 1541300.0 185.44 344.48 0.0 0.0 398.94 224.79 256.41 342.87 314.12 213.97 157.12 True False 216.73773842728616 362.01256060695613 0.0 0.0 340.25645447262247 248.57712859647444 302.99637797520063 391.4728724953369 242.97232154656447 165.6340283913811 118.10276770860207 1.8351622288992298 3.0652335049434134 0.0 0.0 2.8810201579030372 2.104752779458946 2.5655315608080516 3.314679918943371 2.0572957455667438 1.4024567891588628 1.0 6.883898964100713 -6.7768949282965085 24.99790130868545 1.8579659837734617 1.2690294170063703 0.12166055823419963 1.0216415212331356 599.6620822999996 969896.6576055146 0.16493347071829356 0.3124912427156467 1.671494961100036e-07 6.7768949282965085 -0.5889365667670914 S(ph)DDEQSSADKER ddPTM_A549_PD325901_60min_R1 1 SDDEQSSADKER 12 1 A6NGV6;P27540-3;P27540-4;P27540 A6NGV6 ARNT Aryl hydrocarbon receptor nuclear translocator 1 S(0.999)DDEQS(0.001)SADKER 100.43 4.4661000000000005e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)DDESPSTSSGSSDADQRDPAAPEPEEQEER ddPTM_A549_PD325901_60min_R1 2 SDDESPSTSSGSSDADQRDPAAPEPEEQEER 31 1 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 S(0.819)DDES(0.056)PS(0.021)T(0.021)S(0.021)S(0.021)GS(0.021)S(0.021)DADQRDPAAPEPEEQEER;S(0.988)DDES(0.007)PS(0.001)T(0.001)S(0.001)S(0.001)GS(0.001)S(0.001)DADQRDPAAPEPEEQEER 79.422 2.8197000000000003e-06 5877400.0 254.34 0.0 0.0 156.16 197.3 0.0 154.78 0.0 190.49 330.64 189.35 True False 280.16040956478804 0.0 0.0 165.805648534908 183.44232864804903 0.0 160.6702375988659 0.0 182.48436774681898 309.76333397262454 166.0611503885455 1.6870918267715 0.0 0.0 0.9984613989904338 1.1046673362122055 0.0 0.9675365804881749 0.0 1.0988986124680387 1.8653570281059022 1.0 7.375570787473332 S(ph)DDMFTFHGPGK ddPTM_A549_PD325901_60min_R1 1 SDDMFTFHGPGK 12 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.998)DDMFT(0.002)FHGPGK 51.54600000000001 0.0082154 1669800.0 614.91 614.51 394.15 617.44 497.11 489.18 459.76 457.78 580.4 545.29 647.22 True False 677.3352105271834 666.2969143230326 420.8993892164936 655.5778664920185 462.1947085363997 485.1962802671123 477.2564183903253 448.6492187785371 556.0078063953687 510.8602963402267 567.6160430656162 1.1932982141748305 1.173851448462335 0.7415213053938255 1.1549671199413827 0.81427351143944 0.8547966291555713 0.8408085434173583 0.7904096867231666 0.9795491392252534 0.9000103196187699 1.0 9.148771555995095 -5.638549353357046 10.561674482393343 0.9446658876418618 1.1882019500766965 0.42954848050593675 0.11734505468005714 0.23496684452409083 20.395691100795176 0.01588057663583499 0.06161070737786753 2.298532488490431e-06 5.638549353357046 0.24353606243483472 S(ph)DEDRYQNGAER ddPTM_A549_MK2206_60min_R1 4 SDEDRYQNGAER 12 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER 125.67 9.314e-07 116564200.0 2280.68 2948.1800000000003 2293.7200000000003 1695.45 5801.38 3481.6800000000003 2891.24 2783.61 5618.2 3366.73 3061.4500000000003 True False 2665.6030267274755 3098.2297693050855 2619.0039864091523 2110.8353261116413 4948.004687041617 3850.1090666478617 3416.5408831832533 3178.1952419480976 4345.686670421839 2606.183354704465 2301.2074732783854 1.1583497175636923 1.346349603537152 1.1380998961723439 0.9172729319814293 2.150177567428332 1.673082115087543 1.4846731217659062 1.381098957331441 1.888437579350815 1.1325286333229223 1.0 11.168175345223784 S(ph)DEDRYQNGAER ddPTM_A549_PD325901_60min_R1 4 SDEDRYQNGAER 12 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(0.998)DEDRY(0.002)QNGAER;S(1)DEDRYQNGAER 139.08 2.9491e-09 119978900.0 3845.1400000000003 3347.3499999999995 3831.9900000000002 3169.7999999999997 3933.8999999999996 3145.41 3965.8 3978.2799999999997 3954.9800000000005 4572.01 4784.8099999999995 True False 4235.495782157544 3629.4429320258464 4092.0518850278113 3365.591346861882 3657.596435218248 3119.794823817361 4116.720689169028 3898.9300844997124 3788.7659444134315 4283.332508335894 4196.308703409644 1.0093384642354981 0.864913234118548 0.9751551123259543 0.8020361667212957 0.8716223456692607 0.7434617051129773 0.9810338037866595 0.9291332835765154 0.9028806534979016 1.0207381799283595 1.0 12.034905099015795 -10.434607604146267 0.5301226969572699 1.0117967117267936 0.8894058464015165 0.25030794086961605 0.0747999540678268 1.398684969558826 0.6233594880333835 0.08311705030742786 0.017569095846274932 3.676142991430365e-11 10.434607604146267 -0.1223908653252771 S(ph)DEFRPQNYHQQDFR ddPTM_A549_MK2206_60min_R1 1 SDEFRPQNYHQQDFR 15 1 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 S(0.657)DEFRPQNY(0.343)HQQDFR 52.81399999999999 0.0079798 4681900.0 497.77 484.32 434.18 471.85 694.72 358.78 289.29 415.34 480.59 839.01 692.59 True False 581.7814066919235 508.969819302023 495.75325271573075 587.4532711821516 592.527608290019 396.74586146111085 341.8502483695869 474.2157169254038 371.73713234452873 649.4770582822482 520.6007884884209 1.1175192576660176 0.9776585640214477 0.9522714211693077 1.1284141018837848 1.1381611810662824 0.7620923176337739 0.6566456600309015 0.9109008810806886 0.714054109337556 1.247552966963464 1.0 9.02403368658681 -7.26189645638841 24.99999344133675 0.8418632719516208 1.0555787607487441 0.21848014514449599 0.16069936576386995 34.04533784938585 1862139.24896036 0.019725086747098372 0.032741341248960394 5.4714639688125594e-08 7.26189645638841 0.21371548879712332 S(ph)DFDEFER ddPTM_A549_MK2206_60min_R1 2 SDFDEFER 8 0 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 S(1)DFDEFER;S(1)DFDEFER 64.04 0.0096082 2176260.0 358.74 436.31 115.0 471.26 642.96 486.73 219.68 398.05 613.22 545.3299999999999 662.64 True False 419.2865416490762 458.5163153693128 131.30872924204016 586.7187211556652 548.3814357239614 538.2354455347748 259.59301241602145 454.47480647699973 474.3266491111178 422.13957425186624 498.08820006637035 0.8417917581528858 0.920552454983305 0.2636254567454986 1.1779414189645223 1.100972549943744 1.0806026833461522 0.5211788040379809 0.9124384123463292 0.952294491312811 0.8475197248110196 1.0 8.960257423095246 -2.0000000092501278 0.12194543220765296 1.0468674742348683 0.1573890040535024 0.011231127219396675 0.25280662620923944 176.10275070104316 1.4178286595338145 0.8412852230089769 26.843956301508207 0.009999999787007939 2.0000000092501278 -0.8894784701813658 S(ph)DFDEFER ddPTM_A549_PD325901_60min_R1 2 SDFDEFER 8 0 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 S(1)DFDEFER;S(1)DFDEFER 115.78 0.0012985 6922100.0 1305.36 317.14 380.38 1533.33 814.81 1827.29 815.81 756.77 1189.31 721.7 1183.01 True False 1437.8791862447576 343.8665008029266 406.1948742107572 1628.0403116549078 757.5805565419 1812.4091560760683 846.8560959783614 741.67562867542 1139.3274366369324 676.1317388339072 1037.5072697182645 1.3858979384647727 0.33143526878255386 0.39151038847280517 1.569184485904376 0.7301930103560829 1.7468881510278271 0.8162411201304888 0.7148630668167002 1.0981392322641914 0.651688675894783 1.0 10.018905729988873 -6.238139221872384 24.996276991013477 1.062621482078569 0.6657966551503999 0.11285656871253413 0.4152327052181489 1025.8407111971883 1100514.8663020572 0.049692717575661245 0.13138881917707276 5.779107567364956e-07 6.238139221872384 -0.3968248269281692 S(ph)DGAPASDSKPGSSEAAPSSK ddPTM_A549_MK2206_60min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 S(1)DGAPASDSKPGSSEAAPSSK 157.09 5.2750999999999995e-28 26158000.0 6061.7 6486.7 5194.0 5198.2 9560.1 7039.7 7449.1 7971.8 10227.0 8946.5 8199.3 True False 7084.7667656637195 6816.845323064154 5930.587301592671 6471.759233356064 8153.821954187891 7784.636381425331 8802.505047287807 9101.827062613605 7910.600829163111 6925.479436385901 6163.187520832113 1.149529645449954 1.106058399168064 0.9622597530168874 1.0500669031213072 1.3229878089263485 1.2630860825039931 1.42823904311439 1.476805148609974 1.2835242806461085 1.1236846863700276 1.0 12.589460971802824 -6.729686078895529 24.907821692654828 1.206633122712208 1.0622900432529372 0.2643275154482434 0.13947932733452068 325.78076041644493 255546.25011699708 0.025980276980518358 0.05407837801957927 1.8634335957831992e-07 6.729686078895529 -0.14434307945927083 S(ph)DGSLEDGDDVHR ddPTM_A549_PD325901_60min_R1 1 SDGSLEDGDDVHR 13 0 Q9NRX5 Q9NRX5 SERINC1 Serine incorporator 1 1 S(0.555)DGS(0.445)LEDGDDVHR 90.926 0.00018336 31024000.0 852.02 685.26 582.51 374.42 845.36 652.03 658.82 776.01 824.16 573.12 711.07 True False 938.5164431760275 743.0092651201795 622.0426315171885 397.54707303048315 785.9848299336785 646.7200838598578 683.8917556201374 760.5318717819314 789.5234212936024 536.9331053907289 623.6128978441145 1.5049663764501386 1.1914591049813577 0.9974819854875443 0.637490139162995 1.2603729535596493 1.0370537333265988 1.0966606976610205 1.219557636493982 1.2660472931574305 0.8610038490976607 1.0 9.284506956590594 -8.028878030963668 22.859571895159377 1.1372319630952568 1.0877912728157708 0.0 0.2229091106530605 1403.76825534922 1111208.0512881759 0.035166730213329986 0.045463107483631776 9.356684141908523e-09 8.028878030963668 -0.049440690279485944 S(ph)DISPLT(ph)PR ddPTM_A549_MK2206_60min_R1 1 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.996)DIS(0.006)PLT(0.998)PR 83.045 0.0022349 2308800.0 0.0 246.77 0.0 131.53 368.49 177.62 234.38 225.88 395.08 196.77 326.73 True False 0.0 259.3295389601097 0.0 163.75485590460607 314.2856091357512 196.41563050538625 276.9638121361393 257.89918172848803 305.5950108131181 152.31952033729993 245.5939237107405 0.0 1.0559281558836404 0.0 0.6667707955896981 1.2796961927523722 0.7997576957022917 1.127730718868868 1.0501040816964209 1.2443101449571963 0.6202088310486916 1.0 7.940131056912685 -6.579052812979593 5.255505756352513 1.0974382353911565 0.4076553590014384 0.43960337777455993 0.32181522741677315 0.10134128856220558 5.843049678548256 0.03700521029423618 0.0789227414217053 2.636010810602707e-07 6.579052812979593 -0.689782876389718 S(ph)DNALHLASER ddPTM_A549_PD325901_60min_R1 1 SDNALHLASER 11 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 S(1)DNALHLASER 57.019 0.0043189 1006200.0 0.0 145.0 0.0 0.0 89.38600000000001 118.39 120.58 0.0 0.0 0.0 0.0 True False 0.0 157.21965887754425 0.0 0.0 83.10783572495953 117.4258710920794 125.16873788390778 0.0 0.0 0.0 0.0 0.0 S(ph)DQSDDEKIQNSDDEER ddPTM_A549_PD325901_60min_R1 1 SDQSDDEKIQNSDDEER 17 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 S(0.649)DQS(0.351)DDEKIQNSDDEER 110.75 1.4868e-09 4239400.0 1190.1 1343.2 1175.4 1095.2 1389.9 1050.0 1018.4 1115.3 1467.7 1587.9 843.8 True False 1310.9180758946843 1456.3961779608103 1255.169712254387 1162.848016620333 1292.2782188946962 1041.4491481263906 1057.155769289863 1093.0544665640762 1406.0176730642352 1487.63972300729 740.0179492889083 1.7714679450064157 1.96805520644503 1.6961341457467265 1.5713781236491993 1.746279560024809 1.4073295777854185 1.4285542266990903 1.4770648031097147 1.8999777970457252 2.0102751891853163 1.0 9.531416453808264 -10.917058141524553 1.0728177858374681 0.9849659924730636 1.673061318834487 0.0 0.3435217165951365 0.2850208921124845 0.5612289979259654 0.1527312271585555 0.03303497153396287 1.2104360745956584e-11 10.917058141524553 0.6880953263614233 S(ph)DRGSGQGDSLYPVGYLDK ddPTM_A549_MK2206_60min_R1 1 SDRGSGQGDSLYPVGYLDK 19 1 S4R329;H0YK61;H0YNK0;H0YNK8;H0YLP8;Q5J8M3-3;Q5J8M3-2;Q5J8M3 S4R329 EMC4 ER membrane protein complex subunit 4 1 S(0.525)DRGS(0.468)GQGDS(0.007)LYPVGYLDK 72.532 0.00019086 3898000.0 1149.7 1124.3 1128.0 1367.8 1499.9 1526.6 1209.9 1341.1 1732.3 1598.3 1442.2 True False 1343.7412525337083 1181.5220677264297 1287.9673616088814 1702.9110614028748 1279.2666969055156 1688.1437987249333 1429.7231688007298 1531.2050319464986 1339.9368159146625 1237.242919932441 1084.0619373049008 1.2395428769267551 1.0899027325540325 1.188093887708033 1.5708614081926926 1.180067902841341 1.5572392504821704 1.3188574560187782 1.4124700621380044 1.2360334495701373 1.1413027958608761 1.0 10.082231471326109 -9.949507601372137 0.84111971193819 1.022728473750024 1.3160508131601887 0.26926064735678246 0.14903832906550166 0.41580464448984195 0.5999772334042096 0.06033013416086785 0.029649558752545088 1.1232913087522168e-10 9.949507601372137 0.2933223394101647 S(ph)DSDAEAQGK ddPTM_A549_PD325901_60min_R1 1 SDSDAEAQGK 10 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.736)DS(0.264)DAEAQGK 130.56 1.2113e-06 46796000.0 2145.2 2485.3 1920.6 2044.7 2545.9 2083.7 1122.1 1994.7 2066.6 2488.6 3141.4 True False 2362.979124787226 2694.7449531611082 2050.9434655060213 2170.996475149374 2367.084766878195 2066.731038048532 1164.80212953668 1954.9141436881214 1979.7479887950874 2331.469371292868 2755.0277149753206 0.8576970430979469 0.9781189998610405 0.7444366001684283 0.7880125718331736 0.8591872793190392 0.7501670588700577 0.4227914380698396 0.7095805726606396 0.7185945818381075 0.8462598610605095 1.0 11.427851116727608 -10.700979446938115 1.0165524528121965 0.9965891872894695 0.756765735938476 0.14706205531297278 0.1370060300439418 0.5325861305944347 0.9989972423800483 0.0886214111149385 0.024516404738252916 1.9907675501784178e-11 10.700979446938115 -0.2398234513509936 S(ph)DSDSSTLPR ddPTM_A549_MK2206_60min_R1 1 SDSDSSTLPR 10 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.657)DS(0.276)DS(0.067)STLPR 199.59 2.1796999999999998e-19 66937000.0 5321.1 5718.9 5432.7 4885.6 6784.6 5348.3 5234.3 5093.7 7923.5 7139.0 7461.4 True False 6219.171591595305 6009.9675826031125 6203.138550897666 6082.572219322917 5786.594327505274 5914.253556085786 6185.304556123366 5815.747573802013 6128.839901229476 5526.294941749167 5608.528455836073 1.1088776032015697 1.0715765516620164 1.1060189138280754 1.0845219503154286 1.0317491251174649 1.0545107513774998 1.1028391145429808 1.036947145690295 1.0927714728543425 0.9853377735827772 1.0 12.453406576359916 -10.881398736446078 0.8265521666717475 0.9932558753770354 1.0767565408219724 0.6079914962362363 0.025790503990415336 0.4626058283149861 0.4823578252343788 0.026282230943864168 0.004589943594149104 1.314017846090116e-11 10.881398736446078 0.08350066544493695 S(ph)DSEATISR ddPTM_A549_MK2206_60min_R1 3 SDSEATISR 9 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.995)DS(0.005)EATISR;S(0.998)DS(0.002)EATISR;S(0.938)DS(0.06)EAT(0.002)ISR 88.49600000000001 0.001117 184960000.0 758.8699999999999 806.01 459.68000000000006 441.08000000000004 1084.58 855.78 733.28 722.8399999999999 1203.77 753.34 938.75 True False 886.948703409807 847.0324662529393 524.869536156357 549.1446198008339 925.0397187344377 946.3380715792109 866.507484269939 825.3047836046585 931.1180170256846 583.1599707826474 705.6324668180384 1.256955632171223 1.2003876041482708 0.7438284954817777 0.7782303757608164 1.310937013578455 1.341120365176229 1.22798698333333 1.1695958199404677 1.3195509855498078 0.8264358546487162 1.0 9.46277313196238 -6.778416825873829 24.999773790446437 1.1853757865375785 0.9916015098895549 0.1481850800492578 0.20095569008162303 319.5863257443058 470599.5938285536 0.028609905317467835 0.054164446309327964 1.6656477946157827e-07 6.778416825873829 -0.1937742766480236 S(ph)DSEATISR ddPTM_A549_PD325901_60min_R1 2 SDSEATISR 9 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.818)DS(0.182)EATISR;S(0.888)DS(0.112)EATISR 230.61 3.6152e-32 235446000.0 9720.5 9663.2 9975.5 9547.099999999999 11734.7 9785.9 9206.900000000001 9082.0 10674.2 10324.099999999999 10077.3 True False 10707.318004146111 10477.551777003348 10652.497417554569 10136.80268396273 10910.495154517286 9706.206874904801 9557.273617709 8900.852385308834 10225.600494530394 9672.234564078066 8837.855985267963 1.2115289072365967 1.1855309471515074 1.2053259789830786 1.1469753185455853 1.2345183235282693 1.098253568635234 1.0814018279592077 1.0071280183956246 1.157022756602472 1.0944096147528257 1.0 13.109480706927798 -7.407651284842728 4.541312989918946 1.071069301738667 1.1935312350502254 0.6609522146113679 0.04440584534356526 0.15264635767842327 5.059052249361442 0.009056926481598941 0.014608500484932533 3.9115484607823887e-08 7.407651284842728 0.12246193331155841 S(ph)DSELEVR ddPTM_A549_PD325901_60min_R1 2 SDSELEVR 8 0 Q9BQK8;Q9BQK8-2 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 1 S(0.995)DS(0.005)ELEVR;S(0.989)DS(0.011)ELEVR 57.598 0.01636 4805200.0 120.14 140.72 181.53 134.69 260.58 383.53999999999996 281.23 116.36 0.0 320.11 347.58 True False 132.33652435760652 152.57896825688294 193.8497174285681 143.00949539681585 242.27775975219782 380.41657740228186 291.9323615449608 114.0391085173459 0.0 299.89819996968555 304.82986349115737 0.43413241354367954 0.5005381248064923 0.6359275800882658 0.46914529225895324 0.7947966678114722 1.2479636117191555 0.9576895065382245 0.374107402769788 0.0 0.983821586687766 1.0 8.251860437094512 -5.581488819064527 3.404509115307483 0.6047511616881728 0.44201274604249435 0.0 0.3455022670626747 1.1350323612183166 25.457233832821867 0.060326580766872064 0.32057690734127353 2.62126652241825e-06 5.581488819064527 -0.16273841564567842 S(ph)DSFPER ddPTM_A549_MK2206_60min_R1 2 SDSFPER 7 0 E9PD43;A0A0A0MSN9;A0A0A0MT02;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.995)DS(0.005)FPER;S(0.87)DS(0.13)FPER 76.17 0.017800999999999997 8436000.0 1972.71 2112.33 1938.79 1520.85 2214.35 1929.68 2032.32 2060.9300000000003 2572.5 3060.0 3264.5 True False 2305.6552198710724 2219.8385745090904 2213.739575366741 1893.4583182735505 1888.6220483317065 2133.8774567820847 2401.566237223819 2353.073138833419 1989.8328574383584 2368.743874737703 2453.8345543834757 0.9396131518941654 0.9046406859597034 0.9021551886667198 0.7716324292895455 0.7696615262662733 0.8696093438614976 0.9786993311891032 0.9589371600583019 0.8109075055136724 0.9653233835615492 1.0 11.260822265685372 -7.54306953962112 24.28025116735882 0.9177498019202207 0.8540403973552894 0.23336360175299264 0.06873125952882458 304.51247848429205 366187.07355429523 0.013318210225886579 0.01975563836724988 2.863719391881645e-08 7.54306953962112 -0.06370940456493135 S(ph)DSFPER ddPTM_A549_PD325901_60min_R1 2 SDSFPER 7 0 E9PD43;A0A0A0MSN9;A0A0A0MT02;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.988)DS(0.012)FPER;S(0.999)DS(0.001)FPER 126.82 0.0058306 10581700.0 3228.5 3103.3999999999996 3291.7 2664.5 3870.1 3280.7 2666.3999999999996 3067.1 3277.1000000000004 2541.1 3165.2 True False 3556.254943303919 3364.9344093832465 3515.0945566001074 2829.080113481446 3598.277527120195 3253.983066912617 2767.8713111100665 3005.924284406598 3139.3748834222283 2380.654512333162 2775.900465855951 1.2811176002333156 1.2121956283276412 1.2662898399407219 1.0191576204837363 1.2962559614004976 1.1722261323621517 0.9971075494800176 1.0828645772353798 1.1309392833198 0.8576152285053511 1.0 11.438740123475077 -2.0000000027965346 0.09869603949679202 0.9323068405786338 1.8850610854356358 0.5190050517024675 0.09343898205868548 72.95023762399813 0.495361698050566 0.5400568953373126 9.447729435943927 0.009999999935607412 2.0000000027965346 0.952754244857002 S(ph)DSFPERR ddPTM_A549_MK2206_60min_R1 2 SDSFPERR 8 1 E9PD43;A0A0A0MSN9;A0A0A0MT02;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.69)DS(0.31)FPERR;S(0.872)DS(0.128)FPERR 51.092 0.01252 5727400.0 440.14 464.22 251.92000000000002 388.68 692.26 375.81 436.90999999999997 389.38 544.27 517.26 638.19 True False 514.4248716101475 487.84681515606474 287.64604409265036 483.9066174485084 590.4294710312769 415.5779647575117 516.2908915453563 444.5758074262384 420.9937140205929 400.4106067473281 479.70980985204153 1.0723667956025609 1.0169623491888418 0.5996251028957902 1.0087486382606212 1.2308054972096254 0.8663111660895361 1.0762566888190126 0.9267598833623193 0.8776008023484894 0.8346933886359923 1.0 8.906018132087075 -5.53219138137925 24.999917013664795 0.9459323484666029 1.0585159164129534 0.07382949632796143 0.1504167904795386 350.6128446359143 941228.738793591 0.01949776585615843 0.07571482179790741 2.9363553974674803e-06 5.53219138137925 0.1125835679463505 S(ph)DSFPERR ddPTM_A549_PD325901_60min_R1 1 SDSFPERR 8 1 E9PD43;A0A0A0MSN9;A0A0A0MT02;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.787)DS(0.213)FPERR 59.426 0.005248 4585000.0 238.39 257.97 298.2 336.1 174.26 246.88 343.06 336.17 426.87 282.45 249.53 True False 262.59117730655737 279.71003724579367 318.4376452222717 356.8601336615178 162.02057876436407 244.86949113280306 356.11533602963505 329.4648256297366 408.93013838041173 264.6160587967813 218.8393919009969 1.1999264621670755 1.2781521407824725 1.4551203165759716 1.6306942299627738 0.7403629545710961 1.1189461321642777 1.627290831582743 1.5055096926004379 1.8686313045752385 1.20917928211249 1.0 7.77372864173089 -7.751024715644642 24.875939214801704 1.4440744334168958 1.2442698565437273 0.10869623721208665 0.29178032273298177 488.1866575253191 1166054.0943559343 0.05767041911800425 0.08501345168968583 1.774088514861738e-08 7.751024715644642 -0.19980457687316844 S(ph)DSLKESR ddPTM_A549_MK2206_60min_R1 1 SDSLKESR 8 1 Q8WXF0 Q8WXF0 SRSF12 Serine/arginine-rich splicing factor 12 1 S(0.541)DS(0.424)LKES(0.036)R 60.255 0.0031759 6251500.0 2329.1 2548.3 1818.5 1773.1 2088.0 2025.5 2244.7 2499.5 2584.0 3780.0 3926.5 True False 2722.1951389721316 2677.9975853306605 2076.3906445795674 2207.5095795974844 1780.8579659568752 2239.837065581915 2652.532934132569 2853.811779397714 1998.728125800084 2926.095374675986 2951.4416841129473 0.9223272659003203 0.9073523626591761 0.7035174219285394 0.7479428075709885 0.6033857878822059 0.7588959245369931 0.8987244940025929 0.9669212828290809 0.6772040039140396 0.9914122275993472 1.0 11.527204121323999 -7.748405803370959 24.503093366270985 0.8580347881437075 0.7678392123303386 0.18476802616769794 0.12028145577411296 385.04804887592104 723886.5428499692 0.02234922920894192 0.033028021929285716 1.7848190662379334e-08 7.748405803370959 -0.0901955758133689 S(ph)DSLLSFR ddPTM_A549_MK2206_60min_R1 2 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.98)DS(0.02)LLSFR;S(0.977)DS(0.016)LLS(0.007)FR 103.7 0.0021194000000000005 4765600.0 791.66 912.8599999999999 523.53 640.69 831.84 783.6800000000001 493.16 709.79 892.51 832.78 682.78 True False 925.2728537712757 959.3206748596893 597.7744262616111 797.6590787616674 709.4774379317847 866.6084974353179 582.7607884335629 810.4049061407094 690.3579100456012 644.654419609171 513.2268822306473 1.8028534470948705 1.8691941285113056 1.1647371697746876 1.5542036210082901 1.3823855735073152 1.688548529782309 1.1354837570095686 1.5790383048885355 1.3451320146074306 1.2560807742714055 1.0 9.003452928879492 -9.536463108204806 0.06594514995006749 2.1496745085355376e-12 2.5220538591792594 0.3889245010489578 0.21315945096663605 19.793608385209858 0.6078294370235198 12.97482820301821 9.88125676820413 2.907614940659758e-10 9.536463108204806 2.5220538591771096 S(ph)DSNASFLR ddPTM_A549_MK2206_60min_R1 1 SDSNASFLR 9 0 A0A5F9ZI40;A0A5F9ZHN5;A0A5F9ZGY4;A0A5F9ZHF7;Q01484;A0A5F9ZH30;A0A5F9ZHT4;A0A5F9ZI65;A0A5F9ZI46;A0A5F9ZHT8;A0A5F9ZH19;A0A5F9ZI30;A0A5F9ZGZ5;I6L894;A0A5F9ZHD2;A0A5F9ZHR8;D6RHE1;A0A5F9ZGY3;A0A5F9ZHE4;A0A5F9ZHS1;A0A5F9ZGX3;A0A5F9ZI56;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZHQ5;A0A5F9ZH39;A0A5F9ZGY1;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHA1;A0A5F9ZI36;A0A5F9ZHY6;A0A5F9ZH38;A0A5F9ZHQ3;A0A5F9ZI53;A0A5F9ZH34;A0A5F9ZH35;A0A5F9ZHL9;A0A5F9ZHG3;A0A5F9ZI69;Q01484-5;Q01484-2;A0A5F9ZH58;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZI08;A0A5F9ZHE2;A0A5F9ZHJ6;A0A5F9ZHJ4;A0A5F9ZI15;A0A5F9ZI73;A0A5F9ZGS7;A0A5F9ZGX8;A0A5F9ZHR2;E9PHW9;A0A5F9ZI45;A0A0U1RQN6;B7Z651 A0A5F9ZI40 ANK2 Ankyrin-2 1 S(0.533)DS(0.467)NASFLR 97.734 0.00085449 4219200.0 773.81 713.66 454.26 582.82 1027.8 471.56 647.2 666.01 931.28 775.45 861.3 True False 904.4102101618759 749.9822457116815 518.6808986564273 725.6109261637843 876.6119815184268 521.4601662038059 764.7878625075066 760.4189570700828 720.3465669485696 600.2753064265856 647.4154393292961 1.3969549615604149 1.158425023797149 0.8011562084366816 1.1207810041037891 1.354017726896615 0.8054490741586635 1.1812938278083158 1.1745456022146386 1.1126496576832152 0.9271871969078367 1.0 9.338547960601721 -14.524167747919549 0.01695671022566113 7.277184967976421e-07 1.949784126962738 0.10668287249863961 0.17668341568546303 7152.540108798471 10.188593025379877 736.2058990048828 464.4378466084992 2.9911090860276503e-15 14.524167747919549 1.9497833992442413 S(ph)DSPEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A549_PD325901_60min_R1 1 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 31 0 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.522)DS(0.478)PEIPFQAAAGPSDGLDASSPGNSFVGLR 75.893 4.5973e-06 24668000.0 721.56 489.27 647.07 651.12 788.66 705.5 968.49 897.05 736.16 613.59 871.22 True False 794.812240015603 530.5024999932141 690.9840613480064 691.3382035991884 733.2672423292976 699.7546419077797 1005.3464169280627 879.1576340278892 705.2217552653595 574.8478226840754 764.065463118609 1.040241024337755 0.6943155077680326 0.904351910538773 0.9048154078021311 0.959691646493737 0.9158307444648286 1.3157857087593536 1.1506312959618932 0.9229860389015975 0.7523541508312349 1.0 9.577552439646528 -6.808435068303375 1.7738723109415813 1.0036881030550047 0.86488504864111 0.12551935644036394 0.15291452665059974 0.5128387167254863 3.271110139841743 0.021089072580709686 0.04945180649827085 1.5544076740668397e-07 6.808435068303375 -0.13880305441389462 S(ph)DSPES(ph)DAEREK ddPTM_A549_PD325901_60min_R1 1 SDSPESDAEREK 12 1 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 2 S(0.96)DS(0.04)PES(1)DAEREK 146.77 2.0293e-11 7263900.0 1925.7 1777.3 1787.5 1880.7 2206.0 1680.3 1554.5 1517.0 1958.8 1800.8 2142.6 True False 2121.195646374586 1927.079308434893 1908.810499110701 1996.8665676203993 2051.0581702868535 1666.6161939016902 1613.6573481550386 1486.7422449365217 1876.4784479104899 1687.0971806735502 1879.0737830604571 1.1288517063549168 1.0255474403438534 1.0158251987326499 1.0626866201965164 1.0915261490936692 0.8869349404616054 0.8587514565430563 0.7912101474350076 0.9986188221168515 0.897834452208559 1.0 10.875806000896134 -7.243926220081653 24.793178948527938 0.9632456237156208 1.0598539241937492 0.44172251685630926 0.07514025906829042 873.6100505720061 1236759.6352184813 0.0125443938987468 0.02169519910071287 5.702611426041044e-08 7.243926220081653 0.0966083004781284 S(ph)EAEDEDDEDYVPYVPLR ddPTM_A549_MK2206_60min_R1 2 SEAEDEDDEDYVPYVPLR 18 0 D6RD33;D6RGI7;A0A499FJW5;Q9UJV9 D6RD33 DDX41 Probable ATP-dependent RNA helicase DDX41 1 S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR 290.62 4.606399999999998e-133 9275300.0 1238.6399999999999 1450.13 1432.4299999999998 670.0799999999999 4137.1 2112.91 1724.35 1387.58 4155.8 1392.79 1644.47 True False 1447.6921501594784 1523.935422993977 1635.5701132884847 834.2496300810343 3528.538070383233 2336.4967337638536 2037.6420746520673 1584.2737142855292 3214.517935448912 1078.1577716653342 1236.1027139368946 1.1711746393215878 1.2328550093870085 1.323166833020952 0.674903161909589 2.8545670441456306 1.8902124454708835 1.6484407417586924 1.2816683406832237 2.6005265575470773 0.8722234483504064 1.0 10.271582913608668 -6.711712209779842 24.999994111988727 1.8010531392157125 1.1258807423188038 0.206756586398124 0.5885475029815993 146.03994375283546 73419.73106197914 0.09402712331608544 0.1957328308633126 1.9421724541184337e-07 6.711712209779842 -0.6751723968969088 S(ph)EAEDEDDEDYVPYVPLR ddPTM_A549_PD325901_60min_R1 2 SEAEDEDDEDYVPYVPLR 18 0 D6RD33;D6RGI7;A0A499FJW5;Q9UJV9 D6RD33 DDX41 Probable ATP-dependent RNA helicase DDX41 1 S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR 229.16 2.8893999999999996e-64 9622900.0 1315.4699999999998 1504.28 2169.41 1547.08 1646.3500000000001 1507.86 1543.0700000000002 1723.2600000000002 1436.6799999999998 1822.06 2229.4 True False 1449.0155460021683 1631.0509548711193 2316.639208322094 1642.6396179263925 1530.7160555991677 1495.5804880893895 1601.7923732503027 1688.8882274286836 1376.3013357892794 1707.0148206452948 1955.1979333309935 0.741109389131533 0.8342127040265239 1.184861731300691 0.8401398088263587 0.7828957004835553 0.7649253625904914 0.8192481926990339 0.8637939917169366 0.7039191850231394 0.8730649677688238 1.0 10.933098949985222 -5.305438694523186 5.330882120683037 0.8627672105548947 0.7393778262566634 0.0803257828728009 0.12310949392322973 0.3768602788951591 26.193850334012 0.019456797568215504 0.13313143954856047 4.949499736605782e-06 5.305438694523186 -0.12338938429823132 S(ph)EAEEGEVR ddPTM_A549_PD325901_60min_R1 1 SEAEEGEVR 9 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 S(1)EAEEGEVR 64.73 0.0061418 10874000.0 270.56 215.63 278.19 153.5 377.44 178.81 153.87 265.11 104.79 321.71 330.35 True False 298.0270520242551 233.80189685355086 297.06964629236705 162.98134637620635 350.92991649731175 177.35383064426654 159.7256070508948 259.82217307522825 100.38604071704114 301.397175696628 289.7190442611883 1.0286760843915286 0.8069952648427666 1.025371483776372 0.5625496480282289 1.2112766607808512 0.6121579998185347 0.5513120735925753 0.8968073663842155 0.34649444938297136 1.0403084701084115 1.0 8.178510710966187 -6.25079264167071 24.531681542358598 0.7144779531224851 0.9390123722909018 0.04799549969304262 0.2515865868880087 994.038825084531 2290406.914620852 0.0388027964495903 0.101461328986317 5.61315918070895e-07 6.25079264167071 0.22453441916841677 S(ph)EDEANRDR ddPTM_A549_PD325901_60min_R1 1 SEDEANRDR 9 1 P54652 P54652 HSPA2 Heat shock-related 70 kDa protein 2 1 S(1)EDEANRDR 51.286 0.007350499999999999 3822300.0 515.81 0.0 0.0 233.54 111.32 291.86 215.57 301.35 218.59 99.34299999999999 202.94 True False 568.1746514807476 0.0 0.0 247.9652353921774 103.50126723315165 289.4831889258747 223.77363431443032 295.3393378454983 209.40342246720118 93.07046602601753 177.97966654265346 3.19235709627865 0.0 0.0 1.3932222720102223 0.5815342237892507 1.6264958494935657 1.2572988738621003 1.659399321184362 1.17655812337988 0.5229275221937382 1.0 7.475568618305075 -7.24780997910715 24.057806185155858 1.1817568248844377 0.9385869306188378 0.004125727066844331 0.8567545187083807 2049.447304254804 3617557.72223378 0.11446221776411358 0.1974902872081792 5.6518421101064373e-08 7.24780997910715 -0.24316989426559987 S(ph)EDEDSLEEAGSPAPGPCPR ddPTM_A549_PD325901_60min_R1 2 SEDEDSLEEAGSPAPGPCPR 20 0 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 1 S(0.786)EDEDS(0.213)LEEAGS(0.001)PAPGPCPR;S(0.993)EDEDS(0.006)LEEAGS(0.001)PAPGPCPR 52.026 0.012095999999999999 1154050.0 321.42 240.85 391.66999999999996 429.46999999999997 344.5 0.0 434.47 234.8 164.23 410.05999999999995 237.86 True False 354.050321783102 261.1472747631483 418.2510815030425 455.99738650286196 320.30350846048105 0.0 451.00399360110646 230.11672980296342 157.32798422520906 384.1687416187227 208.60472791877183 1.6972305724583814 1.2518761073566649 2.004993298454407 2.1859398444718945 1.5354566104810596 0.0 2.162002741264436 1.1031232709767158 0.7541918430845473 1.8416109042759252 1.0 7.704628045943375 -7.015889788375522 24.740629574731045 0.9434282637705143 1.7748991592075967 0.16930486069844852 0.5836958471210258 492.1084502658523 766220.8967557731 0.07255194945714871 0.12814361468003013 9.64073647137386e-08 7.015889788375522 0.8314708954370824 S(ph)EEHS(ph)PPR ddPTM_A549_MK2206_60min_R1 3 SEEHSPPR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 S(1)EEHS(1)PPR;S(1)EEHS(1)PPR;S(1)EEHS(1)PPR 73.9 0.0017887 20603900.0 269.76 394.64 319.933 228.17 1203.21 564.6700000000001 497.38 602.23 1046.3 624.8900000000001 824.8599999999999 True False 315.2888930012119 414.7254903562736 365.3043101964664 284.0716602429405 1026.2194028826493 624.4230046023898 587.7475078089977 687.5979467520251 809.3147205977667 483.72691499504674 620.0244970221328 0.5085103806631646 0.6688856526607033 0.5891772211436128 0.45816199457809503 1.6551271890246246 1.0070940867681557 0.9479423968437446 1.108985128901254 1.3052947496183798 0.7801738759005507 1.0 9.276181406942248 -6.7323356749132754 24.99998987168263 1.1483995954878734 0.5665903278276386 0.5988557573165461 0.21884214658481602 96.01709406415112 82477.92262445934 0.027784384589983963 0.0578305694421436 1.8520995451694598e-07 6.7323356749132754 -0.5818092676602348 S(ph)EEHS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 SEEHSPPR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 S(1)EEHS(1)PPR;S(1)EEHS(1)PPR 59.542 0.0042945 11510500.0 625.8 261.43 679.0999999999999 490.21000000000004 355.13 320.62 488.7 440.23 294.25 364.66 639.3299999999999 True False 689.3307553103893 283.4616235886648 725.1878097600431 520.4891583523133 330.1868939319903 318.0089770212223 507.2977459269013 431.4492672962461 281.88369578193874 341.6353053667352 560.6964630467857 1.2294187688729368 0.5055527228553467 1.2933696885110046 0.928290425668126 0.588887064023514 0.5671677957324425 0.9047635919982099 0.7694881200993863 0.5027384946396884 0.6093052620847877 1.0 9.131076158881687 -6.5758013923824965 9.930134713786188 0.7461376352804314 0.9842259995412213 0.24307298347249373 0.23543027939366076 0.5684187471503401 102.7944348342663 0.03603014427734761 0.07509001795863059 2.6558198197643953e-07 6.5758013923824965 0.23808836426078983 S(ph)EEKEAGEI ddPTM_A549_MK2206_60min_R1 2 SEEKEAGEI 9 1 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 S(1)EEKEAGEI;S(1)EEKEAGEI 71.555 0.0025337 181183000.0 2612.7 2440.36 1938.6399999999999 2354.9 4619.1 2455.0 3086.3999999999996 2910.5 5220.6 3100.3999999999996 3202.0 True False 3053.659885617831 2564.563900379676 2213.568303111207 2931.850605715477 3939.636508884771 2714.786470502891 3647.1589289912986 3323.0722880324256 4038.1424355851077 2400.017486678684 2406.855029295722 1.2687344474217763 1.065524873398836 0.9196932412497344 1.2181251342642667 1.6368399678968457 1.1279393388713046 1.5153213985050467 1.3806698980971865 1.6777672051011407 0.9971591381558867 1.0 11.232933532077002 -6.522517244908695 24.998295301010465 1.3529818013336106 1.080433385076017 0.18292408535107474 0.22894000206295773 17.354980833124046 1200102.0168190917 0.038224715172444225 0.08026460797102629 3.0024981956870934e-07 6.522517244908695 -0.2725484162575935 S(ph)EEKEAGEI ddPTM_A549_PD325901_60min_R1 2 SEEKEAGEI 9 1 Q9NQ29;Q9NQ29-3;B8ZZ08 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 1 S(1)EEKEAGEI;S(1)EEKEAGEI 87.719 0.00094613 186479000.0 6617.0 6695.0 7223.3 7189.599999999999 6499.3 5974.6 7312.4 7241.4 6832.4 8667.0 7619.2 True False 7288.752968822062 7259.211146104543 7713.516575231506 7633.685263233698 6042.81158936779 5925.944838472317 7590.677383498816 7096.964596231599 6545.257988311022 8119.764140880522 6682.0867020882315 1.090789942390936 1.0863688948896688 1.1543574513663435 1.142410388187283 0.9043300182679969 0.8868404590770109 1.1359740934110656 1.0620880740762781 0.9795230562131962 1.2151539635579705 1.0 12.706082986859247 -6.741022221820626 24.999267748023186 0.9939233703975754 1.1187504917594115 0.1284251662525987 0.09398445611902666 178.89495286976407 219042.1092826396 0.009643856835524359 0.020056647403615225 1.8154227695107402e-07 6.741022221820626 0.12482712136183616 S(ph)EESDTDTSER ddPTM_A549_MK2206_60min_R1 1 SEESDTDTSER 11 0 F8VQX7;Q9BZF1;Q9BZF1-3;Q9BZF1-2;F8VUA7 F8VQX7 OSBPL8 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 1 S(0.498)EES(0.498)DT(0.004)DTSER 44.765 0.05259 1063300.0 0.0 0.0 152.78 0.0 0.0 0.0 0.0 0.0 0.0 187.41 195.26 True False 0.0 0.0 174.44650133564264 0.0 0.0 0.0 0.0 0.0 0.0 145.0739508381022 146.77155309815205 0.0 0.0 1.1885579845229493 0.0 0.0 0.0 0.0 0.0 0.0 0.9884337105916254 1.0 7.197428565441385 -10.733040622238429 0.9407586507227853 1.010374595937336 0.13553817549866196 0.48735133086476334 0.3394272103205332 0.4180382404730889 0.64503814118647 0.2503279917782102 0.06157023839893688 1.8490956535808344e-11 10.733040622238429 -0.874836420438674 S(ph)EETQERER ddPTM_A549_PD325901_60min_R1 3 SEETQERER 9 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.998)EET(0.002)QERER;S(0.996)EET(0.004)QERER;S(0.986)EET(0.014)QERER 76.165 0.00056174 26089900.0 2270.91 2253.54 1955.7600000000002 2288.1600000000003 3109.15 2886.51 2570.4199999999996 2778.85 3048.7400000000002 2662.31 2965.74 True False 2501.451111444416 2443.4537245993192 2088.489634540277 2429.4944464115974 2890.774029985209 2863.0032195793406 2668.2387396877944 2723.423656784348 2920.612060078939 2494.211292247334 2600.972781374836 0.9617367507099346 0.9394384063134046 0.8029648174312429 0.934071461188995 1.1114203311490205 1.1007432450200418 1.0258618463040596 1.0470788761367915 1.1228922044063632 0.9589532463038427 1.0 11.344835586526225 -6.6486161706621 5.642229941694366 1.062134121018272 0.8998207861489255 0.5727693703053693 0.05929844129860554 0.10597777175041079 4.861831177290026 0.008516137773329522 0.017904777009688646 2.24586594258858e-07 6.6486161706621 -0.16231333486934651 S(ph)EGEFK ddPTM_A549_MK2206_60min_R1 2 SEGEFK 6 0 A0A087WY82;Q9Y624-2;Q9Y624 A0A087WY82 F11R Junctional adhesion molecule A 1 S(1)EGEFK;S(1)EGEFK 85.38 0.039952 35074000.0 9288.400000000001 10969.7 9329.5 7933.4 18528.0 10881.7 8026.2 11443.0 17232.6 12305.9 11068.3 True False 10856.054840422808 11528.01087462298 10652.56338664012 9877.083356143861 15802.555743893177 12033.194271312144 9484.456647184405 13065.080292717772 13329.44361480749 9525.988643181267 8319.735640460285 1.3048557441690782 1.3856222568611805 1.280396859587088 1.18718716350913 1.8994059939888799 1.4463433444679035 1.1399949538131817 1.5703720475420002 1.6021474949256975 1.1449869388703613 1.0 13.022321972132273 -10.924999115303885 1.1766501007062777 0.9996053117061645 1.437474454580269 0.2925336984481378 0.20687592258063112 0.41296644504588687 1.014391740027086 0.14625845241171506 0.03438109301630079 1.1885046485232117e-11 10.924999115303885 0.4378691428741044 S(ph)EGEFK ddPTM_A549_PD325901_60min_R1 2 SEGEFK 6 0 A0A087WY82;Q9Y624-2;Q9Y624 A0A087WY82 F11R Junctional adhesion molecule A 1 S(1)EGEFK;S(1)EGEFK 80.219 0.042985 40365000.0 14047.400000000001 14357.099999999999 13858.4 11652.3 19763.9 14538.0 16730.4 15764.6 16286.900000000001 18676.8 18242.4 True False 15473.481706850696 15567.02320324684 14798.914361329087 12372.036106706639 18375.75184575355 14419.60734805853 17367.08452722616 15450.162685910549 15602.418232220409 17497.543660597377 15998.700448101414 0.9671711622481783 0.9730179806631856 0.9250072785183807 0.7733150668606239 1.1485777801367751 0.9012986645280756 1.0855309519397331 0.965713605053718 0.9752303496670548 1.0936853100886599 1.0 13.965667101335624 -6.757006468860566 24.99999999997518 0.9963471601332666 0.9152543148254377 0.2650062365760164 0.0838334081664661 134.11714551558995 756361.8952413141 0.010220042513418738 0.02070569093592119 1.7498206246740198e-07 6.757006468860566 -0.0810928453078289 S(ph)EGEKVR ddPTM_A549_PD325901_60min_R1 2 SEGEKVR 7 1 A0A0U1RRH1;A0A0X1KG73;A0A087X080;H7BY35;Q15413-3;Q15413-2;Q15413;Q92736;Q92736-2;P21817-3;P21817-2;P21817 A0A0U1RRH1 RYR3;RYR2;RYR1 Ryanodine receptor 3;Ryanodine receptor 2;Ryanodine receptor 1 1 S(1)EGEKVR;S(1)EGEKVR 57.59 0.009705 362430000.0 10005.2 2853.1 2440.59 10049.0 5498.4 19292.4 5019.9 5137.5 9113.0 4061.5 7409.900000000001 True False 11020.92053856105 3093.54074995532 2606.2231138599077 10669.703907065126 5112.211352450245 19135.289090774822 5210.935041494684 5035.028532209214 8730.012301311157 3805.056196860074 6498.52927522621 1.6959099623625866 0.4760370568381621 0.40104814543121164 1.6418644058033762 0.7866720508498889 2.9445568805425952 0.8018637480575624 0.7747950834666275 1.343382776560204 0.5855257452429684 1.0 12.665897533969392 -6.2626655868692 24.997104111531357 1.2381791777342719 0.819502277618344 0.05517499175078355 0.690096024739256 227.48797080949225 4637568.05118507 0.08767305180531598 0.21476693875355443 5.461782644990576e-07 6.2626655868692 -0.41867690011592784 S(ph)EHKVWSPLVTEEGK ddPTM_A549_MK2206_60min_R1 1 SEHKVWSPLVTEEGK 15 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 S(0.529)EHKVWS(0.452)PLVT(0.019)EEGK 41.202 0.040097 433620.0 394.5 384.35 238.07 416.86 478.03 453.01 363.43 361.59 605.84 458.37 519.57 True False 461.08195540101593 403.91177330841725 271.83190583176105 518.9907187135564 407.7124202425117 500.9472175162992 429.4605266858824 412.8464898229322 468.6182073276796 354.8238986482092 390.5464295974949 1.180607273445609 1.0342221633537834 0.6960296784992159 1.328883531846492 1.043953776924061 1.2826828759709454 1.0996401301850158 1.057099639211707 1.199903959717791 0.9085319228597171 1.0 8.609350261236118 -6.279998393581425 24.957378624551442 1.1164004811345192 0.9766798681418395 0.14486388100384595 0.1564487244497203 1080.0407237819136 1452391.4775326361 0.020215840472456288 0.04705393873101046 5.248094014717928e-07 6.279998393581425 -0.13972061299267968 S(ph)EKS(ph)S(ph)APR ddPTM_A549_MK2206_60min_R1 1 SEKSSAPR 8 1 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 3 S(1)EKS(1)S(1)APR 45.137 0.050234 2175100.0 248.46 315.1 328.38 233.51 537.38 282.52 357.77 332.05 562.85 380.52 510.59 True False 290.3939737362141 331.13724409908224 374.9492218130538 290.7199604826621 458.3321138629812 312.4160788784018 422.7721779501089 379.11910436047634 435.36537368675624 294.56026771738254 383.79641143288677 0.7566354585027024 0.8627940080596276 0.9769482221399559 0.7574848326415353 1.1942063557911309 0.8140151121059478 1.1015532333189564 0.9878130515734946 1.1343654101958356 0.7674909377543551 1.0 8.584197411906814 -5.800874391548997 0.48542349073818114 1.0602449682495199 0.6812380861346558 0.08700708232514998 0.1452701689022485 2.1152273475948484 0.4549921586095939 0.022909498515289672 0.41268901776467865 1.581705440528029e-06 5.800874391548997 -0.3790068821148641 S(ph)EKS(ph)S(ph)APR ddPTM_A549_PD325901_60min_R1 1 SEKSSAPR 8 1 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 3 S(1)EKS(1)S(1)APR 45.137 0.050234 2313700.0 369.28 467.31 711.65 428.41 519.88 533.73 565.14 528.0 400.87 442.49 343.68 True False 406.76903375043196 506.69185372458753 759.9468484990939 454.8719127102969 483.36542228863533 529.3834798376174 586.6467119564742 517.4686257920133 384.02282796297624 414.5511058841841 301.40953876702036 1.3495559411105797 1.6810743807157464 2.521309881591066 1.5091490288298337 1.603683228692576 1.756359410532171 1.9463442144408467 1.716828962709105 1.2740898298504522 1.375374872275089 1.0 8.235581264686962 -8.890734490216177 1.9267498687182 1.1006553681664073 1.7831617555485928 0.3889672006319903 0.29807422573620423 0.18274078486417802 1.3380134118705989 0.055797082430918195 0.05756633109893916 1.2860726715871313e-09 8.890734490216177 0.6825063873821855 S(ph)ENNSSNSDIVHVEKEEVPEGMEEAAVASVVLPAR ddPTM_A549_PD325901_60min_R1 1 SENNSSNSDIVHVEKEEVPEGMEEAAVASVVLPAR 35 1 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.467)ENNS(0.37)S(0.073)NS(0.091)DIVHVEKEEVPEGMEEAAVASVVLPAR 104.86 1.6345e-14 6184000.0 736.47 700.95 916.88 861.12 758.51 721.08 907.01 656.35 689.37 936.01 1030.1 True False 811.2358922394411 760.021516484239 979.1049904473399 914.3094266545855 705.2348743174443 715.2077635533124 941.5267618849159 643.2585843533858 660.3981762487512 876.9101688595343 903.4042303419102 0.8979766365853896 0.841286204954558 1.083795002904491 1.0120712256445248 0.7806415452034523 0.7916807775879339 1.042198752521424 0.7120384903554554 0.7310107193086877 0.970673082333975 1.0 9.8192278592276 -6.752228849953439 24.999646269558543 0.8593036457304927 0.9593191672649468 0.13861924406228676 0.11698004648942419 357.1436471463308 969368.0951196745 0.01904255572133626 0.0392123879970849 1.769176451324802e-07 6.752228849953439 0.10001552153445414 S(ph)EPFSPSLRPEPPK ddPTM_A549_PD325901_60min_R1 1 SEPFSPSLRPEPPK 14 1 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 S(0.668)EPFS(0.291)PS(0.041)LRPEPPK 85.619 4.5227e-05 5993100.0 2259.2 2552.3 2244.3 2582.3 2390.2 2104.1 2163.5 2353.2 2723.9 2876.9 2958.3 True False 2488.552320864861 2767.391278297631 2396.611694072251 2741.8028061711884 2222.3205977423554 2086.964907212131 2245.8331764126265 2306.263579950312 2609.423955617409 2695.252043025175 2594.447854208791 0.9591837881142444 1.0666590480160494 0.9237463339971916 1.0567962665826387 0.856567841260421 0.8043965515925071 0.8656304935053402 0.8889226955203675 1.0057723655475763 1.0388538118632282 1.0 11.341211824111536 -8.780482184567276 23.96307546582709 1.002725860149171 0.9279835222588073 0.20141879462022183 0.0762320434383674 207.46427185463247 261067.40844446034 0.013984579772408667 0.01490154497197789 1.657745338737093e-09 8.780482184567276 -0.07474233789036377 S(ph)EPSLEPESFR ddPTM_A549_MK2206_60min_R1 1 SEPSLEPESFR 11 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.993)EPS(0.006)LEPESFR 63.408 0.006749 710570.0 145.99 170.3 119.73 114.61 631.02 199.68 91.90100000000001 261.96 449.44 151.02 152.5 True False 170.62954288718464 178.96754258988793 136.70951436651714 142.68945514503838 538.1977939071393 220.8100050631434 108.5982221141878 299.0936322188539 347.6425576082006 116.90447711205482 114.63004121411544 1.4885237855621871 1.5612621324596543 1.192615067730455 1.2447823767114525 4.695085059786806 1.9262839193322479 0.9473801192423816 2.609208101567216 3.032735170694436 1.0198415343294782 1.0 6.840841372010994 S(ph)EPSLEPESFR ddPTM_A549_PD325901_60min_R1 2 SEPSLEPESFR 11 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.995)EPS(0.005)LEPESFR;S(0.965)EPS(0.035)LEPESFR 53.568999999999996 0.020575 1201960.0 545.81 461.51 349.54999999999995 448.92999999999995 619.46 354.14 648.94 459.01 246.45 666.28 563.79 True False 601.2202293959144 500.40306736948594 373.27256501490626 476.65938650599537 575.9512666209854 351.2560012547426 673.6357668135942 449.854685463621 236.09256355296097 624.2109670919441 494.44740415927174 1.2159437471781103 1.0120450894475639 0.7549287585999085 0.9640244493071572 1.1648382856823727 0.7104011433774173 1.3624012607751543 0.9098130188963709 0.4774877197593916 1.2624415900277894 1.0 8.94967325515906 -8.530063587319884 24.986530321230937 0.7501208308294081 1.0154357297420837 0.0 0.26036953430489895 213.1832034894639 741378.2971970252 0.04135594675805786 0.04694084986566832 2.9507771563649496e-09 8.530063587319884 0.2653148989126757 S(ph)ERENPEESDTETQDHSR ddPTM_A549_PD325901_60min_R1 1 SERENPEESDTETQDHSR 18 1 Q9H0X9-3;Q9H0X9-2;Q9H0X9 Q9H0X9-3 OSBPL5 Oxysterol-binding protein-related protein 5 1 S(0.455)ERENPEES(0.455)DT(0.09)ET(0.001)QDHSR 47.808 0.0090894 1975300.0 105.12 136.79 147.55 152.01 104.59 0.0 187.96 154.4 147.29 193.01 157.16 True False 115.79170501474613 148.3177733645467 157.56363029022876 161.39931246024187 97.2439592159121 0.0 195.1129206556586 151.32037087554318 141.09991351477228 180.82331566070732 137.83031631932303 0.8401033104101843 1.0760896247305018 1.1431710707620224 1.171000087428622 0.7055338898781809 0.0 1.41560235705782 1.0978743640475046 1.0237219015581036 1.3119270164176278 1.0 7.106749439160237 S(ph)ESETSTMAAK ddPTM_A549_MK2206_60min_R1 2 SESETSTMAAK 11 0 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.888)ES(0.097)ET(0.007)S(0.004)T(0.004)MAAK;S(0.95)ES(0.032)ET(0.017)STMAAK 59.265 0.0034790999999999997 19683200.0 1813.33 2134.4 2554.2 2370.2 4222.1 2989.8 2318.4 2970.1 4397.0 3053.5 3364.8 True False 2119.375772337959 2243.031843240499 2916.4239672175563 2950.899106402322 3601.0346829820523 3306.1786515313834 2739.623270144317 3391.12077054977 3401.0865205661653 2363.7122292521494 2529.2272962443008 0.8379538586686384 0.886844708093741 1.153088918322292 1.1667196185902984 1.4237687092533358 1.3071892180037725 1.0831858703298185 1.3407734352643244 1.3447136703041698 0.9345590381544878 1.0 11.304480979405163 -5.767051648491936 3.0941018108130485 1.2014874296448306 0.8416425411017125 0.44691778889882916 0.14385742683802133 0.17961442360069535 3.4477685938006823 0.02160126310470067 0.09387840418450934 1.7098119635295673e-06 5.767051648491936 -0.359844888543118 S(ph)ESETSTMAAK ddPTM_A549_PD325901_60min_R1 2 SESETSTMAAK 11 0 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.996)ES(0.004)ETSTMAAK;S(0.981)ES(0.002)ET(0.014)S(0.003)TMAAK 83.045 0.00022801 30336000.0 4410.700000000001 4725.9 5205.6 4901.0 5378.5 4906.0 4709.8 5057.700000000001 5425.9 6218.700000000001 5531.9 True False 4858.471017014274 5124.168178547495 5558.8833198157545 5203.723639021415 5000.732714817696 4866.047162579113 4889.034016301448 4956.820205811109 5197.868292075515 5826.050220710017 4851.511369603352 1.0014345318150808 1.0562003854412145 1.1458044506799199 1.0725984631562058 1.030757702877762 1.0029961370526377 1.0077342180280542 1.0217063979005714 1.071391551227155 1.2008732489451717 1.0 12.244218538304994 -6.763728420000881 7.288920323380373 1.0289478423280103 1.0736883328854552 0.0 0.06331881376777038 0.16362934283395297 51.119145552690156 0.005946569557843123 0.011806582265069365 1.7229456582266638e-07 6.763728420000881 0.04474049055744489 S(ph)ESLDPDSSMDTTLILK ddPTM_A549_MK2206_60min_R1 2 SESLDPDSSMDTTLILK 17 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.539)ES(0.445)LDPDS(0.007)S(0.007)MDT(0.002)TLILK;S(0.542)ES(0.457)LDPDSSMDTTLILK 90.367 2.1423e-06 3853700.0 2044.8200000000002 2322.4 1902.6399999999999 1996.0 2784.5 1961.1799999999998 1358.36 2166.51 2764.5 2882.1000000000004 2758.5 True False 2389.9356249508382 2440.600240227573 2172.462961783264 2485.020089603844 2374.903738604845 2168.710765874075 1605.1564291033635 2473.61942715861 2138.3451639993564 2231.0316082946197 2073.488319273032 1.1526159094972634 1.1770503925882982 1.0477333976710959 1.1984731558435282 1.145366345462457 1.0459237921506248 0.774133335685312 1.1929748550625374 1.0312790981861248 1.0759798295255516 1.0 11.017844204693839 -7.32779971814297 4.936170120425732 1.0111505810558563 1.1437863215295083 0.2815255187984117 0.09903973158545476 0.20104945251611972 9.709282462443035 0.013765190004156668 0.02236840092486717 4.7011085777518264e-08 7.32779971814297 0.132635740473652 S(ph)ESLDPDSSMDTTLILK ddPTM_A549_PD325901_60min_R1 1 SESLDPDSSMDTTLILK 17 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.548)ES(0.452)LDPDSSMDTTLILK 91.20700000000001 5.5235000000000006e-06 1999600.0 1048.5 1250.6 836.75 1474.0 1579.2 1452.3 1151.2 948.91 968.38 1078.3 1372.7 True False 1154.9429481350953 1355.992450981081 893.5368867865061 1565.0456323031156 1468.2824399442432 1440.4729503085296 1195.0095459608121 929.9832456445055 927.6823562321625 1010.215953976171 1203.8666022622463 0.9593612331837963 1.1263643732893391 0.7422225063037848 1.3000158234825683 1.2196388181091824 1.1965386759643173 0.9926428258041294 0.7724969227461973 0.7705856732705334 0.8391427688730823 1.0 10.233459823838665 -8.00254744721182 21.471724613591768 0.8798374187310293 1.0920770606346042 0.35709371823653213 0.15110595516828618 16.888664451854098 142361.49193136048 0.025549712108508132 0.034886966317362336 9.941514557378159e-09 8.00254744721182 0.21223964190357492 S(ph)ESLELPQAAPPQIYHEK ddPTM_A549_PD325901_60min_R1 1 SESLELPQAAPPQIYHEK 18 0 B0QY58;B0QY55;B0QY57;B0QY56;H0YGT9;Q15040 B0QY58 JOSD1 Josephin-1 1 S(0.551)ES(0.449)LELPQAAPPQIYHEK 132.48 4.0255e-13 11855000.0 2942.1 3578.3 3006.4 2981.5 3395.1 3836.6 3712.3 3736.4 4081.0 3896.4 3841.6 True False 3240.779826140452 3879.855899044941 3210.4323829518376 3165.6604835222106 3156.6398884591567 3805.3560016206743 3853.5736079485073 3661.8745708509027 3909.489762059785 3650.3806390362142 3369.1075539088256 0.961910468658239 1.151597518619893 0.952902907248273 0.9396139579602982 0.9369365144775017 1.1294848682422487 1.143796553326891 1.0868974980043038 1.1603932790818774 1.0834859322911958 1.0 11.718150769819328 -7.266639541749293 24.898533771867474 1.0874647879610038 0.9929443604300142 0.3907432725527591 0.06851809541383702 468.5878131030237 2243608.38630172 0.012306059169042677 0.020036497644227675 5.412033276600532e-08 7.266639541749293 -0.09452042753098955 S(ph)ESLESPRGER ddPTM_A549_PD325901_60min_R1 2 SESLESPRGER 11 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;Q5VY93 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.772)ES(0.227)LES(0.001)PRGER;S(0.5)ES(0.5)LESPRGER 60.628 0.002291 34809000.0 1771.8200000000002 1347.37 1376.35 1428.83 2137.1800000000003 1962.69 1331.6799999999998 1365.89 2101.09 1840.06 1636.93 True False 1951.6938620550563 1460.9175984954252 1469.7573876649014 1517.0855839916273 1987.071849670744 1946.706503367795 1382.3578111232569 1338.6462524300239 2012.7884940372942 1723.8782975733964 1435.5979873542221 1.3594988842607592 1.0176369787114752 1.0237945445811292 1.0567621279461288 1.3841422648779809 1.3560248206780614 0.9629142861024166 0.9324659578947457 1.4020558065470838 1.2008085221340195 1.0 10.487436090334596 S(ph)ESLKGREEMKR ddPTM_A549_PD325901_60min_R1 1 SESLKGREEMKR 12 3 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.561)ES(0.439)LKGREEMKR 54.233999999999995 0.0036738 7644100.0 1369.8 1300.8 1171.9 1360.7 1353.3 1947.3 1480.8 2100.9 1746.5 1964.6 1795.4 True False 1508.8610876065377 1410.4229811579967 1251.4321812071773 1444.7473486260849 1258.2488766315505 1931.4418344252579 1537.1526543248522 2058.9959013758325 1673.1006786173512 1840.5548207192662 1574.5771819783188 0.9582642914403126 0.8957471232918054 0.7947734766706464 0.9175462245749592 0.7991026994628937 1.2266415749773345 0.9762320144850277 1.3076500313492947 1.0625713987009808 1.1689200388429164 1.0 10.620748761302298 -7.242906090104894 24.95050450981689 1.0612862151158253 0.8724649018180884 0.5284592105388366 0.10953138092669908 593.930495469679 799580.9788995027 0.015350621030117756 0.02655752060679291 5.716022240161459e-08 7.242906090104894 -0.18882131329773688 S(ph)ESPKEPEQLR ddPTM_A549_MK2206_60min_R1 1 SESPKEPEQLR 11 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.541)ES(0.459)PKEPEQLR 47.037 0.009181100000000001 18858000.0 2473.5 2746.1 2723.0 2635.2 3586.4 2705.3 2813.4 2378.0 3747.9 3579.3 4218.4 True False 2890.966328731087 2885.8647604585494 3109.1623454441356 3280.824118298625 3058.8453108753515 2991.573050367196 3324.5583627605342 2715.0887823195717 2899.006634166463 2770.7336440681884 3170.8548580827855 0.9117308921793634 0.9101219985210702 0.9805438863020203 1.0346812658219022 0.9646752840414906 0.9434594720541736 1.0484738379891294 0.8562639741767346 0.9142665823308317 0.8738128259025627 1.0 11.630656126053216 -5.3694298878402975 0.003248473054651544 1.8914522904706295 1.983836611373519e-08 0.0 0.06162492478519106 198658.2623793399 97.71595455484972 27764.22996975999 29144.803213851854 4.271398709997965e-06 5.3694298878402975 -1.8914522706322634 S(ph)ESPKEPEQLRK ddPTM_A549_MK2206_60min_R1 3 SESPKEPEQLRK 12 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.572)ES(0.428)PKEPEQLRK;S(0.528)ES(0.472)PKEPEQLRK;S(0.53)ES(0.47)PKEPEQLRK 48.625 0.006761399999999999 21724700.0 6871.6 10379.5 6393.9 10602.400000000001 7895.200000000001 6097.4 5451.6 6242.5 15553.3 10575.699999999999 10178.400000000001 True False 8031.35808550982 10907.772215570996 7300.651164353743 13199.988475959823 6733.826538708202 6742.622820873455 6442.085153346606 7127.393491854462 12030.502383516428 8186.642024857362 7650.822370450841 1.0497378839337181 1.4256993153702289 0.954230906281456 1.7253032205977075 0.8801441482572804 0.8812938654692791 0.842012118622353 0.9315852789083202 1.572445653683044 1.0700342562488412 1.0 12.901399112990974 S(ph)ESPSKDFGPTLGLK ddPTM_A549_MK2206_60min_R1 1 SESPSKDFGPTLGLK 15 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 S(0.502)ES(0.441)PS(0.056)KDFGPT(0.001)LGLK 62.765 0.0013187000000000001 5202500.0 2233.5 2801.2 2785.1 2628.8 3282.2 2735.5 2624.3 2613.3 4400.1 3999.7 3741.0 True False 2610.4601961677304 2943.7691151074214 3180.0690592348383 3272.856118011316 2799.3927279040477 3024.9687943220597 3101.1013405105846 2983.7432778956 3403.484375515848 3096.1649920877076 2812.0064536524987 0.9283265309640448 1.0468571689384911 1.1308896731386464 1.1638864177428265 0.9955143325748533 1.0757332332551888 1.102807334059487 1.0610726991824764 1.2103401722620808 1.1010518799009572 1.0 11.457384190111572 -7.593047588984149 5.578843155915796 1.0984400099939906 1.0606916492249987 0.061886388213598154 0.07458525056319776 0.6720723455585906 38.37127393504006 0.014436069151787656 0.021571357161508726 2.552421598885675e-08 7.593047588984149 -0.037748360768991907 S(ph)ESPVCSSR ddPTM_A549_PD325901_60min_R1 1 SESPVCSSR 9 0 O00472;D6RC27 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 S(0.641)ES(0.359)PVCSSR 115.42 0.00020510000000000003 24332000.0 901.89 1019.1 1161.0 959.24 1163.1 1095.5 1229.8 1046.5 571.16 1107.3 1173.9 True False 993.4492088636739 1104.9831335317608 1239.7924416601527 1018.4900762078962 1081.4078684771707 1086.578611211867 1276.600711972382 1025.6267365366314 547.1561314624029 1037.3848890269994 1029.5177419652161 0.9649656031835915 1.0733016911612334 1.2042458241599114 0.9892885131476515 1.050402362578913 1.0554248527448677 1.23999874886616 0.9962205552464231 0.531468384816713 1.0076415847353597 1.0 10.007752977210863 -8.539169386367092 24.3927079542743 0.7779644590584334 1.0836344881523163 0.3128927607107177 0.14358999274333298 136.81847643166978 204863.41128589114 0.029923153125415547 0.03393479634153578 2.889552660376997e-09 8.539169386367092 0.30567002909388297 S(ph)ESTQPLLDSEERPEDLQLVDHVDGGDGILPR ddPTM_A549_PD325901_60min_R1 1 SESTQPLLDSEERPEDLQLVDHVDGGDGILPR 32 1 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 S(0.476)ES(0.437)T(0.087)QPLLDSEERPEDLQLVDHVDGGDGILPR 78.542 5.4569e-06 23682000.0 539.83 395.9 419.71 546.78 363.15 528.41 527.13 543.38 530.0 505.7 630.64 True False 594.6331441981584 429.2638824111707 448.19404452125985 580.5533587725218 337.6435967994881 524.1068041537774 547.1902206066039 532.5418596266362 507.7259431246476 473.7700156966981 553.0752779563367 1.0751396200448189 0.7761400654126861 0.8103671640818543 1.0496823523150758 0.6104839797705509 0.9476229096523706 0.9893593917784961 0.9628740984309165 0.9180051312377241 0.8566103649530699 1.0 9.111332045900319 -7.4917188800846 24.915122249729066 0.9626228482131556 0.8579868136538538 0.08811565321462023 0.12412165568512068 902.033960073689 721258.2315783082 0.01654728181207186 0.026434820276466087 3.223154472210642e-08 7.4917188800846 -0.10463603455930182 S(ph)ESTSARPSR ddPTM_A549_PD325901_60min_R1 1 SESTSARPSR 10 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 S(0.578)ES(0.405)T(0.014)S(0.003)ARPSR 50.207 0.007704899999999999 4906900.0 948.18 1226.7 777.92 1114.5 1159.6 1216.8 890.5 1186.3 1305.5 1448.9 1582.6 True False 1044.438535586776 1330.078314104024 830.7143292129772 1183.3401337868538 1078.1536964028262 1206.8907842287538 924.3884648002971 1162.638315865653 1250.6343749985422 1357.416206729179 1387.9502329279755 0.7525043123365178 0.9583040389698507 0.5985188153760591 0.8525810981641014 0.7767956449910942 0.8695490339612073 0.6660098055895252 0.8376657089591666 0.9010657193091454 0.9780006332544194 1.0 10.438740123475077 -9.111452511813345 1.0461706492220741 0.9745871663318431 0.7859929852035642 0.4109636940953638 0.09354748720797898 0.29187640892180877 0.6633839792591913 0.021154345875048126 0.01888338009714638 7.736552699424969e-10 9.111452511813345 -0.18859418112827886 S(ph)ET(ph)PPHWR ddPTM_A549_PD325901_60min_R1 1 SETPPHWR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 S(1)ET(1)PPHWR 50.108000000000004 0.045792 2559300.0 104.69 146.86 153.25 107.3 134.74 195.62 0.0 83.509 99.87700000000001 172.61 307.35 True False 115.31805173129531 159.23640760521485 163.65046656711323 113.92767730401913 125.27632722776552 194.02693557760426 0.0 81.84334748345685 95.67951702162341 161.71137514219316 269.5478984521757 0.4278202590095709 0.5907536601828385 0.6071294471477721 0.42266208699168417 0.4647646223440788 0.7198235886525725 0.0 0.30363192572980807 0.3549629493349557 0.5999355812855083 1.0 8.074397851321315 -10.69801077432911 0.9614837528656198 0.9994450978133296 0.4340112935780842 0.24499183904758037 0.2112277993134793 0.3266531049015951 0.5378179977189658 0.1256388603779127 0.03305208645763098 2.0044222994171457e-11 10.69801077432911 -0.5654338042352454 S(ph)ETPPVPPPPPYLASYPGFPENGAPGPPISR ddPTM_A549_MK2206_60min_R1 2 SETPPVPPPPPYLASYPGFPENGAPGPPISR 31 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.512)ET(0.487)PPVPPPPPYLASYPGFPENGAPGPPISR;S(0.511)ET(0.488)PPVPPPPPY(0.001)LAS(0.001)YPGFPENGAPGPPISR 49.585 0.0027625999999999996 11028100.0 1385.26 1427.66 1102.23 1107.3600000000001 1963.36 1709.8200000000002 1177.99 925.6500000000001 2265.8 1718.83 2002.51 True False 1619.0580216446435 1500.3217959711071 1258.5427881082956 1378.663249711279 1674.5523448472647 1890.75201751334 1392.0155348504595 1056.8637221842348 1752.5999177390988 1330.545109220721 1505.2315005355958 1.0756206079055253 0.996738239558007 0.8361124436078285 0.9159144285916944 1.1124882413445512 1.2561204152587606 0.9247850143683204 0.702127029502225 1.1643391180130656 0.8839471594550623 1.0 10.555769671308447 -6.7534039282860485 24.969494128866597 1.0543788216734404 0.9504291263081948 0.0 0.15407334736422398 360.8078319368305 1121170.1118333682 0.02217095704396812 0.045514744681233114 1.7643960291707262e-07 6.7534039282860485 -0.10394969536524568 S(ph)ETPPVPPPPPYLASYPGFPENGAPGPPISR ddPTM_A549_PD325901_60min_R1 1 SETPPVPPPPPYLASYPGFPENGAPGPPISR 31 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.512)ET(0.487)PPVPPPPPY(0.001)LASYPGFPENGAPGPPISR 49.585 0.0027625999999999996 4287700.0 880.04 1213.0 701.43 894.61 1174.7 989.77 869.47 992.86 1166.3 1230.9 998.68 True False 969.3810129487931 1315.2237670238696 749.0332578412415 949.868027893277 1092.1931244949992 981.7096412771971 902.5581566422405 973.0566284163979 1117.2844669175026 1153.1807639332924 875.8486911541197 1.1067905024456044 1.5016563709089734 0.8552085142174826 1.0845115571750423 1.2470111967122985 1.1208667104172785 1.0304955248068308 1.1109871353854348 1.2756592299581326 1.316643817111524 1.0 9.774537845701321 -11.120992500269208 1.4868632662983516 1.0003270716540391 1.163298482092684 0.0 0.17989070913720198 0.6796827690873468 2.697963275955543 0.1081024012151712 0.02356086551143826 7.568459647057452e-12 11.120992500269208 0.16297141043864483 S(ph)FADIGK ddPTM_A549_MK2206_60min_R1 4 SFADIGK 7 0 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q6U841-2;Q6U841-4;Q6U841;F8WDX9;Q6U841-3;C9J240;E7EW28;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7;SLC4A10 Sodium bicarbonate cotransporter 3;Anion exchange protein;Sodium-driven chloride bicarbonate exchanger 1 S(1)FADIGK;S(1)FADIGK;S(1)FADIGK;S(1)FADIGK 92.051 0.012325 109607000.0 7083.5 7816.5 7684.2 8665.199999999999 11697.199999999999 8772.6 8952.8 9762.499999999998 13383.3 12103.899999999998 13084.999999999998 True False 8279.021625052212 8214.326463029123 8773.93510644944 10788.174388995609 9976.557375187138 9700.910709219415 10579.40787307973 11146.364271402348 10352.00391873849 9369.620583476366 9835.633372371807 0.841737518227133 0.8351598877305738 0.8920559331842659 1.096845925479439 1.0143279031944383 0.9863025940423088 1.0756203970348446 1.1332634970628706 1.0524999790879928 0.9526199512270896 1.0 13.263802243496142 -6.106974394598143 4.493834352629281 1.036828852139742 0.8431481591627861 0.7366785337085944 0.04912755085026127 0.07959064561595543 2.6180894737759957 0.006522783037114181 0.0183230121785296 7.816738896409395e-07 6.106974394598143 -0.1936806929769559 S(ph)FADIGK ddPTM_A549_PD325901_60min_R1 2 SFADIGK 7 0 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q6U841-2;Q6U841-4;Q6U841;F8WDX9;Q6U841-3;C9J240;E7EW28;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7;SLC4A10 Sodium bicarbonate cotransporter 3;Anion exchange protein;Sodium-driven chloride bicarbonate exchanger 1 S(1)FADIGK;S(1)FADIGK 102.07 0.010766 217130000.0 7012.400000000001 7634.3 6906.5 7596.8 7662.5 7182.8 7845.5 8346.8 7870.4 8237.4 8190.5 True False 7724.2936857439645 8277.669253578179 7375.216622158349 8066.0370824154015 7124.312434189947 7124.305658249748 8144.064795722327 8180.316526062074 7539.634458053257 7717.289158196524 7183.120423857314 1.075339578059871 1.1523779033531913 1.0267427227953783 1.1229154749550982 0.9918130302435071 0.9918120869292093 1.133778123595621 1.1388249177742824 1.0496321950850012 1.0743644409141568 1.0 12.810394986936537 -9.664610539040822 1.1886357077294065 1.0100131986239744 1.0764382175613953 0.026467302104364876 0.057867732458456805 0.47939425327012525 1.3869889852457382 0.015305338914307612 0.01070933030826717 2.1646588482064682e-10 9.664610539040822 0.06642501893742092 S(ph)FADIGKK ddPTM_A549_MK2206_60min_R1 2 SFADIGKK 8 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q6U841-2;Q6U841-4;Q6U841;F8WDX9;Q6U841-3;C9J240;E7EW28;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7;SLC4A10 Sodium bicarbonate cotransporter 3;Anion exchange protein;Sodium-driven chloride bicarbonate exchanger 1 S(1)FADIGKK;S(1)FADIGKK 60.434 0.0047287 139861000.0 7206.1 7410.1 8562.7 7596.200000000001 12065.1 8283.2 9037.3 8941.900000000001 13376.9 11076.8 12558.3 True False 8422.313507769988 7787.24243890387 9777.019616354934 9457.269341006377 10290.339772541323 9159.72272605684 10679.26042929402 10209.441708420258 10347.053508519799 8574.54318682829 9439.727518552296 0.8922199810553069 0.8249435615169265 1.0357311264694604 1.001858297542975 1.0901098312760917 0.970337619179669 1.1313102426214758 1.0815398737257205 1.0961178157085887 0.9083464718633433 1.0 13.204529500890423 -5.783786270425809 10.075020859005235 1.0490160596646663 0.8585757055808694 0.5234898314075321 0.06380374706270815 0.12386800510619564 54.39554849721792 0.007077035015069703 0.02256229405034749 1.6451811679048882e-06 5.783786270425809 -0.1904403540837969 S(ph)FADIGKK ddPTM_A549_PD325901_60min_R1 3 SFADIGKK 8 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;C9JRP1;Q9Y6M7-3;Q6U841-2;Q6U841-4;Q6U841;F8WDX9;Q6U841-3;C9J240;E7EW28;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7;SLC4A10 Sodium bicarbonate cotransporter 3;Anion exchange protein;Sodium-driven chloride bicarbonate exchanger 1 S(1)FADIGKK;S(1)FADIGKK;S(1)FADIGKK 73.95100000000001 0.0021398000000000003 249117000.0 25560.9 26811.8 26890.8 27224.7 34625.3 30219.3 32347.0 35738.8 33391.0 31345.399999999998 35347.3 True False 28155.82375105997 29071.324482020274 28715.771395516647 28906.30788722022 32193.33837880028 29973.20403997699 33577.98278595758 35025.961597453796 31987.692390330365 29366.246094560567 30999.806184996218 0.9082580575838334 0.937790523867555 0.9263209977556236 0.9324673746254181 1.0385012792235369 0.9668835947265987 1.083167507099099 1.1298767930493134 1.0318674961849368 0.947304183752404 1.0 14.919971575151578 -6.754596158888977 21.54738351719543 1.027092896051523 0.9270442813259568 0.5135318805874591 0.04775467691632163 17.74362882343524 55865.84499072099 0.006461740713435483 0.013176070555096921 1.759559029622054e-07 6.754596158888977 -0.10004861472556625 S(ph)FAGNLNTYK ddPTM_A549_MK2206_60min_R1 3 SFAGNLNTYK 10 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 S(1)FAGNLNTYK;S(1)FAGNLNTYK;S(1)FAGNLNTYK 196.38 3.0339999999999996e-19 265273900.0 18882.0 23683.1 20491.100000000002 19223.3 26779.5 23573.100000000002 21502.600000000002 23667.699999999997 29704.1 26180.0 27284.1 True False 22068.81997942202 24888.46863130109 23397.046102361477 23933.00936296672 22840.271024589132 26067.58979544263 25409.34408583731 27022.66895429136 22976.168777700583 20265.919817200338 20508.70496714786 1.0760708691637648 1.213556325041928 1.140834886446528 1.166968338630066 1.1136866545779522 1.2710500169171746 1.2389540990783965 1.317619469273071 1.1203129995046135 0.9881618488180297 1.0 14.323948774513928 -9.608320937144793 1.198367574070675 1.025535420008843 1.1897320508156588 0.516602376567659 0.06997724545997451 0.24812039470194486 0.7319801794138874 0.019291968742852755 0.013926777483885242 2.464217644129062e-10 9.608320937144793 0.1641966308068159 S(ph)FAGNLNTYK ddPTM_A549_PD325901_60min_R1 2 SFAGNLNTYK 10 0 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 S(1)FAGNLNTYK;S(1)FAGNLNTYK 191.48 1.4094999999999999e-14 387240000.0 15841.7 17290.4 18581.2 18382.1 21129.8 18066.7 18467.9 19482.0 18353.2 20402.1 19890.1 True False 17449.937721956838 18747.522688664078 19842.23196983259 19517.5205682219 19645.71574185274 17919.570785195294 19170.70604052264 19093.416226666668 17581.87882897222 19113.907924155832 17443.743793732297 1.0003550802108643 1.0747419195299257 1.1374984753537878 1.1188836983053334 1.1262327613933214 1.027277802121467 1.0990018121804137 1.0945710079465345 1.0079188869587479 1.0957457384247777 1.0 14.09042208554788 -8.768715086692326 16.445930278472385 1.0037386132710189 1.087310999330004 0.09452728865798121 0.04771122052731771 1.5231352326171337 3441.7609272876903 0.006696805677324347 0.007241463666248295 1.703275553957812e-09 8.768715086692326 0.0835723860589852 S(ph)FAGNLNTYKR ddPTM_A549_MK2206_60min_R1 2 SFAGNLNTYKR 11 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 S(0.999)FAGNLNTYKR;S(0.998)FAGNLNT(0.002)YKR 71.08 0.0011295 73009000.0 12796.6 15217.599999999999 14745.2 13155.1 20464.1 14424.0 13417.2 13351.1 22733.7 21918.1 24447.0 True False 14956.353233167652 15992.110840375086 16836.291081910716 16378.100090554872 17453.85799862934 15950.338106123709 15854.931564950119 15243.659311028941 17584.553248259042 16966.785987218438 18376.13519712445 0.8139009140239708 0.870265192807113 0.9162041365773858 0.8912701128318735 0.949811144258482 0.8679919871627665 0.8628001151967549 0.8295356530362441 0.9569233715156124 0.9233054614157088 1.0 14.165545755630399 -8.924997482707452 5.142172511070945 0.9815423944989513 0.8788861662515004 0.4562264608664913 0.039924719467215875 0.10198545507283961 4.691157320219248 0.0067871883545695625 0.007131556564645988 1.1885091163490256e-09 8.924997482707452 -0.10265622824745091 S(ph)FAGNLNTYKR ddPTM_A549_PD325901_60min_R1 2 SFAGNLNTYKR 11 1 Q01813;Q01813-2;B1APP6 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 S(1)FAGNLNTYKR;S(1)FAGNLNTYKR 74.96600000000001 0.00056945 149738000.0 12133.0 11509.7 13473.2 14526.0 15535.8 16373.5 15835.900000000001 16370.0 17954.3 15559.5 16587.0 True False 13364.733228157485 12479.662812295668 14387.572372933315 15423.238029060418 14444.619003600414 16240.159644616615 16438.54384023698 16043.487507983438 17199.743208760112 14577.07051459912 14546.904153656224 0.918733847902503 0.8578913204125996 0.9890470316543014 1.0602419501873144 0.992968596687282 1.1163997145423419 1.1300372688648883 1.102879852545881 1.182364510488448 1.0020737306456586 1.0 13.8284245335493 -6.137847453230541 1.0724985425809868 1.092420181175609 0.871063657289195 0.5850208936361201 0.0594219602252291 0.3932187998471345 0.7297347181625509 0.011085303768204869 0.06891872970243035 7.28035483489802e-07 6.137847453230541 -0.22135652388641391 S(ph)FCHPEPHER ddPTM_A549_MK2206_60min_R1 1 SFCHPEPHER 10 0 J3QLC5;J3QQW3;Q12767;Q12767-3;Q12767-2 J3QLC5 KIAA0195 Uncharacterized protein KIAA0195 1 S(1)FCHPEPHER 51.135 0.007925100000000001 3866600.0 638.34 805.07 680.75 478.67 683.77 649.19 347.3 589.77 962.46 967.57 946.06 True False 746.0761860853852 846.0446242680038 777.2905863610339 595.9441714883126 583.1883387846418 717.8868549025545 410.3999144759841 673.371703594875 744.4643467327982 748.9952649934503 711.1271920723023 1.0491459114525459 1.1897233486495395 1.0930401692219422 0.8380275401249476 0.8200900560210155 1.0095055608976982 0.5771118290105515 0.9469075449535215 1.0468793136194776 1.0532507733402745 1.0 9.473963812855198 -6.068214859882562 9.175542196701771 0.9603068800014554 1.1249110816474293 0.24275569744000913 0.13872944344472046 0.5316959621614198 68.72754784883999 0.02056164337992513 0.054654272734087586 8.5464378765172e-07 6.068214859882562 0.1646042016459739 S(ph)FCHPEVEEEPHER ddPTM_A549_MK2206_60min_R1 2 SFCHPEVEEEPHER 14 0 J3QSG7 J3QSG7 KIAA0195 1 S(1)FCHPEVEEEPHER;S(1)FCHPEVEEEPHER 55.864 0.00466 2824000.0 641.55 618.1199999999999 501.36 157.14 819.98 780.75 496.35 506.90999999999997 744.76 836.64 948.4399999999999 True False 749.8279556084209 649.5796677960159 572.4603868938201 195.63930705428265 699.3620282209375 863.368446780094 586.530370141534 578.7660448467677 576.0730491373344 647.6424429282845 712.9161723876434 1.051775769228457 0.9111585526535246 0.80298415026353 0.2744211937275356 0.9809877448546139 1.2110378193393587 0.8227199674502713 0.8118290302047848 0.8080515935106302 0.9084412277522766 1.0 9.477588638406676 S(ph)FCHPEVEEEPHER ddPTM_A549_PD325901_60min_R1 1 SFCHPEVEEEPHER 14 0 J3QSG7 J3QSG7 KIAA0195 1 S(1)FCHPEVEEEPHER 103.61 7.706799999999999e-06 1762500.0 360.02 326.09 449.11 313.99 236.13 296.96 345.91 432.45 375.92 294.03 397.7 True False 396.5689653672838 353.5707487129547 479.5893053178219 333.38444917697086 219.5450434042769 294.54165621677424 359.0737943392149 423.82444549953783 360.1213896970141 275.4648956205261 348.78542122801457 1.1369998320773598 1.0137199756460342 1.375026810550937 0.9558439914236682 0.6294559062454385 0.8444781183219838 1.029497715457764 1.2151438096446907 1.0325012680549763 0.789783284664424 1.0 8.446195928394124 S(ph)FDEVEGVFGR ddPTM_A549_PD325901_60min_R1 2 SFDEVEGVFGR 11 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9JW88;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(1)FDEVEGVFGR;S(1)FDEVEGVFGR 136.7 3.5729e-08 4856700.0 1489.37 2121.63 1716.69 2041.84 2725.8 2092.4 2757.2 2719.3999999999996 2298.7 2890.8 2793.0 True False 1640.569745983755 2300.427205961131 1833.1949066955797 2167.959819444906 2534.349211499505 2075.360188133009 2862.126754797731 2665.15943367197 2202.0936329445794 2708.2743946529854 2449.478706285756 0.6697628118888274 0.939149705632413 0.7484020587692014 0.8850698778811886 1.0346483947772063 0.84726606637049 1.1684636194032036 1.0880516849698438 0.8990050116760164 1.1056533733904763 1.0 11.258259034756225 -6.528880851030876 5.226013788364101 0.9748526413999361 0.8024650947460735 0.4388745685442508 0.10994446753437828 0.14500024204279036 12.13507652450411 0.014550245564745054 0.03211252965730804 2.9588241104977445e-07 6.528880851030876 -0.17238754665386258 S(ph)FDHLISDTK ddPTM_A549_MK2206_60min_R1 2 SFDHLISDTK 10 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 S(0.999)FDHLIS(0.001)DTK;S(0.986)FDHLIS(0.013)DT(0.001)K 55.31399999999999 0.0053593 9193900.0 1369.65 1673.55 1598.13 1058.3600000000001 1910.95 1678.0099999999998 1409.87 1306.81 2325.8 2012.1599999999999 2410.5 True False 1600.8134352725003 1758.7265466899985 1824.7688649007114 1317.6582475115865 1629.8517864201583 1855.5759044271103 1666.0251293471229 1492.0543194377788 1799.0100135394116 1557.611658494187 1811.9063235844285 0.8834967980605473 0.9706498199149577 1.0070988997327617 0.7272220590879727 0.8995232066941969 1.0241014561703676 0.9194874523376495 0.8234721078107956 0.9928824631399792 0.8596535252511401 1.0 10.823292653956996 -8.947279139759074 24.98309789681313 0.9968599810828509 0.910299660357605 0.0 0.08881744676346849 112.46750266612302 53295.54340995124 0.013553194549942346 0.014427373610422019 1.1290699795227416e-09 8.947279139759074 -0.08656032072524589 S(ph)FDHLISDTK ddPTM_A549_PD325901_60min_R1 2 SFDHLISDTK 10 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 S(0.991)FDHLIS(0.009)DTK;S(0.996)FDHLIS(0.004)DTK 57.106 0.0042587 9479900.0 1910.67 1991.21 2268.77 2298.0 2914.3999999999996 2347.38 2335.96 2461.54 2818.5 2617.3900000000003 2304.8999999999996 True False 2104.639811839088 2159.016254852104 2422.7423754223137 2439.9422408633363 2709.702598134181 2328.2637155513576 2424.8562360863584 2412.442653659227 2700.048246597772 2452.1275487134276 2021.4119119649256 1.0411731519842782 1.0680733808249003 1.1985396747104713 1.2070485121914494 1.3404999654425693 1.151800729861216 1.1995854094523775 1.1934443640010994 1.3357239217875063 1.2130766293594373 1.0 10.981147620628693 -5.708246554595392 5.356256373069731 1.1834957031036644 1.0497950043074444 0.2797140411912934 0.08777196840147698 0.2941941153216694 17.647200589055082 0.017244945305707828 0.06857354004760838 1.9577329276514183e-06 5.708246554595392 -0.13370069879621993 S(ph)FDYNYR ddPTM_A549_MK2206_60min_R1 2 SFDYNYR 7 0 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(1)FDYNYR;S(1)FDYNYR 124.92 0.0060688999999999995 270410000.0 3832.9 4270.9 3223.1 3514.0 7809.799999999999 5141.299999999999 4583.5 5131.7 8165.3 5260.9 5074.5 True False 4479.799814592026 4488.27056751117 3680.1840453914756 4374.930157749453 6660.988765579499 5685.348953481266 5416.262620215009 5859.134190172135 6315.872587304731 4072.459036146266 3814.3616009247803 1.1744559858996884 1.176676738362457 0.9648230635761502 1.1469626153662948 1.7462918995316445 1.490511269855189 1.4199656946268158 1.5360720359474063 1.6558138027012086 1.0676646480393759 1.0 11.89722590207589 -6.552141683864209 24.998350871426776 1.3837588206538973 1.10302714551802 0.3019853848545493 0.2170386546330029 265.02613057422025 226402.18565570022 0.039374451322026216 0.08196532090096373 2.8045185449337647e-07 6.552141683864209 -0.28073167513587727 S(ph)FDYNYR ddPTM_A549_PD325901_60min_R1 2 SFDYNYR 7 0 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(1)FDYNYR;S(1)FDYNYR 143.37 0.004744600000000001 325460000.0 15074.7 16752.199999999997 17613.5 15538.2 17867.0 13115.2 14396.1 14812.7 15852.2 19786.9 17124.8 True False 16605.072446592396 18163.966685851017 18808.858028579758 16497.959324187414 16612.083557803824 13008.39415953071 14943.951463348201 14517.24907816165 15185.98716151045 18537.551757146517 15018.55816305131 1.10563692375239 1.2094347865255166 1.2523744173294447 1.0985048727763846 1.106103753599524 0.8661546613398609 0.9950323660305384 0.9666206915838977 1.0111481406298408 1.2343096824535822 1.0 13.874458695007322 -6.8144217156743645 2.2710355387593295 0.9930695352594386 1.1852873200682859 0.36320278906798087 0.09281056021213849 0.12225757707441033 1.285204977187011 0.008157352992719084 0.01781986912807639 1.533127537386836e-07 6.8144217156743645 0.19221778480884721 S(ph)FDYNYRR ddPTM_A549_MK2206_60min_R1 2 SFDYNYRR 8 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(1)FDYNYRR;S(0.999)FDYNY(0.001)RR 98.04799999999999 0.0010224 23365000.0 2399.7 2517.13 2418.4 2014.66 9914.3 4107.4 2819.1 2848.4 11500.900000000001 3509.1 4030.2000000000003 True False 2804.7106929678525 2645.2411654684956 2761.3654852082627 2508.2517904415236 8455.919603393795 4542.042341728542 3331.2939789785405 3252.1694228591527 8895.964513163388 2716.391872824206 3029.3901121385434 0.925833448036152 0.8731926452354911 0.9115252189355456 0.8279725283287692 2.7912943828236405 1.4993256641093904 1.0996582994148858 1.0735393272157154 2.9365529640827415 0.8966794543693213 1.0 11.564811658968292 -6.690997183637292 24.99961941824981 1.8254298068502774 0.8857275989707412 0.17466620352555517 0.6684855155313841 54.592627203341095 19373.57392330559 0.1137914027143414 0.23687567489049002 2.037055287792843e-07 6.690997183637292 -0.9397022078795363 S(ph)FDYNYRR ddPTM_A549_PD325901_60min_R1 2 SFDYNYRR 8 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.999)FDYNY(0.001)RR;S(0.87)FDY(0.002)NY(0.129)RR 77.37899999999999 0.0018728999999999998 23741000.0 3196.7 3710.3999999999996 3415.3999999999996 3658.7 3891.6 5279.4 4053.5 4429.5 4565.700000000001 4477.799999999999 4862.1 True False 3521.2266307138407 4023.088429649931 3647.1895824686344 3884.6895894894196 3618.2674412911697 5236.406316779492 4207.75816066031 4341.150147624474 4373.819506649441 4195.070943813872 4264.092523391327 0.8257857003330996 0.943480566516948 0.855326089305385 0.9110237566796137 0.8485433703519834 1.2280236153541206 0.9867886631394638 1.0180712833528907 1.0257327866729415 0.9838133016113448 1.0 12.058023027071945 S(ph)FEEEGEHLGSR ddPTM_A549_MK2206_60min_R1 2 SFEEEGEHLGSR 12 0 Q9BXW6-4;Q9BXW6 Q9BXW6-4 OSBPL1A Oxysterol-binding protein-related protein 1 1 S(1)FEEEGEHLGSR;S(1)FEEEGEHLGSR 153.14 1.3116e-28 6705000.0 223.89 293.22 125.67 141.19 522.03 488.87 381.89 362.22 797.19 545.61 632.91 True False 261.67715841504065 308.1436455561181 143.49189568562775 175.78155633825995 445.24007852895966 540.6018989143574 451.2744697357722 413.56579425222674 616.6277378508398 422.3563220573981 475.74097957262796 0.5500412401935879 0.6477130598102617 0.3016176908168195 0.3694900458147828 0.9358875893536265 1.1363366246060953 0.9485717840434206 0.8693087457459414 1.296141733270013 0.8877862958890216 1.0 8.894032491887872 -6.885803175427745 4.198206605654283 1.102350323082528 0.46952355115282873 0.7382722152623646 0.15190934780762055 0.07937760393814414 2.5252454322455162 0.024064253825121274 0.04691354185136994 1.300758955355152e-07 6.885803175427745 -0.6328267719296993 down S(ph)FEEEGEHLGSR ddPTM_A549_PD325901_60min_R1 2 SFEEEGEHLGSR 12 0 Q9BXW6-4;Q9BXW6 Q9BXW6-4 OSBPL1A Oxysterol-binding protein-related protein 1 1 S(1)FEEEGEHLGSR;S(1)FEEEGEHLGSR 153.21 2.4454e-13 12978900.0 880.03 681.6 767.1 820.4100000000001 875.47 987.1200000000001 818.3599999999999 1065.51 801.77 1015.28 1118.49 True False 969.3699977561546 739.040824075408 819.1600189470308 871.0848624137028 813.980007407539 979.0812219985927 849.5031376237745 1044.2575671735751 768.0743951302803 951.1750475312309 980.9228206922853 0.9882224954987006 0.7534138348966442 0.8350912035759444 0.8880258915772146 0.8298104501565917 0.9981225855339028 0.8660244411728931 1.0645664930464065 0.7830120565328601 0.9696736863150356 1.0 9.93799581899726 -7.160683584477044 17.694109429628273 0.9128134872694754 0.8533438111024602 0.13389683616858283 0.0906797154141325 8.700048610322558 1518.5835543051899 0.014919874180193478 0.02584229482323711 6.907428776256892e-08 7.160683584477044 -0.05946967616701526 S(ph)FEEKVENLK ddPTM_A549_MK2206_60min_R1 1 SFEEKVENLK 10 1 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RK35 H0YC42 TPD52 Tumor protein D52 1 S(1)FEEKVENLK 97.86 0.00014126 6447500.0 2023.0 2021.7 1616.5 1199.9 3481.7 2288.7 1503.5 2286.4 3333.4 2801.3 2328.0 True False 2364.432942398621 2124.5958946211185 1845.7440071283304 1493.8755538655587 2969.5465421801 2530.888714883895 1776.6664883807732 2610.504201806336 2578.390222345977 2168.4843844126553 1749.8933504685942 1.3511868833408978 1.2141287890785943 1.054775141944547 0.8536952000334889 1.6969871571801227 1.446310264683366 1.0152998683634118 1.4918076013645538 1.4734556375424388 1.2392094545830288 1.0 10.773051282469028 -5.2511756176864495 20.677749305841452 1.2406263889029694 1.3511876124954638 0.013338782161613882 0.24522830615160862 634.2453052657849 1277444.4402109133 0.03633346712375323 0.5806417341438421 5.608211483088395e-06 5.2511756176864495 0.11056122359249443 S(ph)FEVEEVET(ph)PNSTPPR ddPTM_A549_MK2206_60min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 S(1)FEVEEVET(0.476)PNS(0.282)T(0.243)PPR 70.529 0.0021065000000000003 2018900.0 392.91 488.91 600.29 351.88 555.74 496.99 429.43 759.31 1009.5 657.0 987.19 True False 459.22360227278403 513.7934306965478 685.4201484930813 438.0906157964935 473.99138218432614 549.581151924738 507.4518723680449 866.9445177893493 780.8498618402418 508.5832436936832 742.0434779420503 0.6188634708391668 0.6924034048806401 0.9236927065163276 0.5903840257601537 0.638764973042917 0.7406320091228635 0.6838573310763257 1.1683203795466188 1.0522966444039308 0.6853820009363398 1.0 9.53535990973905 -8.249085858299404 24.995425240462822 1.0361575182125737 0.7019873277875438 0.45748988383932365 0.14029433873324296 274.13530847380775 554670.4863950636 0.014690049544906094 0.018894475357816937 5.635262379070274e-09 8.249085858299404 -0.33417019042502993 S(ph)FEVEEVETPNS(ph)TPPR ddPTM_A549_PD325901_60min_R1 2 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 S(0.988)FEVEEVET(0.079)PNS(0.536)T(0.397)PPR;S(1)FEVEEVET(0.094)PNS(0.453)T(0.453)PPR 142.39 3.4827999999999996e-14 3360120.0 990.71 1283.8999999999999 1390.2 1349.9 1454.2 1469.8 1575.8 1492.5 1305.478 1420.88 1654.37 True False 1091.2861498778452 1392.0987588474416 1484.547331951718 1433.2802571546636 1352.0620087176537 1457.8304361106375 1635.7679313108474 1462.7309166564005 1250.6132995820344 1331.1653943111025 1450.8929779154896 0.7521479299222369 0.9594772185385319 1.0231956143895464 0.9878607719322411 0.9318826607460551 1.0047815092503343 1.1274214957335924 1.0081590709453419 0.8619610947313298 0.9174800723231835 1.0 10.50272539061054 -5.2624187792839345 6.752879497121698 0.964603069473119 0.7485698076392542 0.47856162435830396 0.06679486758874563 0.09255785671365815 28.65179459550186 0.010900981011741317 0.09144293750374623 5.464887433442698e-06 5.2624187792839345 -0.21603326183386484 S(ph)FEVEEVETPNS(ph)TPPRR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 S(1)FEVEEVET(0.039)PNS(0.508)T(0.453)PPRR 51.526 0.0043249 10569000.0 341.15 147.82 300.75 392.06 188.46 283.28 219.13 164.67 352.52 261.46 320.92 True False 375.7832968586439 160.2773101743351 321.1607035566674 416.27665576713645 175.22321975170465 280.97306160118455 227.469112062537 161.38552766888404 337.7048103213218 244.95137097895716 281.4488744794933 1.3351742747367918 0.5694722015525882 1.1410978429052752 1.4790489268681257 0.622575663433579 0.998309416304511 0.8082075740512888 0.5734097461478488 1.1998797683801978 0.8703227946175517 1.0 8.13672906862142 S(ph)FEVEEVETPNST(ph)PPR ddPTM_A549_MK2206_60min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 S(1)FEVEEVET(0.002)PNS(0.187)T(0.811)PPR 73.983 0.00086319 1126400.0 230.97 223.88 331.18 375.33 415.16 350.64 450.13 546.13 527.51 465.75 518.42 True False 269.95208932565976 235.27453573120445 378.1463039163383 467.28586684920407 354.0905139591265 387.7444920640056 531.9127944229048 623.5455999529803 408.0298272603724 360.5367515225769 389.68200633588 0.6927496906105 0.6037603274101742 0.9703971386105043 1.1991466355940354 0.9086652917043443 0.9950279606438786 1.364991931304191 1.6001395748705047 1.0470840855522536 0.9252075940396852 1.0 8.606153506015254 -5.871264467406718 4.125609157824464 1.0878218212559587 0.6481330727699203 0.45231566867706885 0.19869479725296865 0.15982248313721953 4.869684768480999 0.029017651150908652 0.10014618927123982 1.34504103016573e-06 5.871264467406718 -0.43968874848603845 S(ph)FEVEEVETPNST(ph)PPR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 S(0.998)FEVEEVET(0.026)PNS(0.194)T(0.782)PPR 147.92 2.4185e-14 3110400.0 874.45 878.09 969.68 941.89 842.19 893.44 1234.7 970.53 1097.9 714.5 1110.3 True False 963.2235202639333 952.0897259571232 1035.4883159595324 1000.068406112606 783.0374797977727 886.164120859088 1281.687184153764 951.1720177839444 1051.7590810500953 669.386348062667 973.7401387715983 0.9891997689230189 0.9777657180263846 1.0634134043871615 1.0270382890595653 0.8041544644401712 0.9100622286937972 1.3162517730558483 0.9768232610641642 1.0801229600917144 0.6874383846465624 1.0 9.92739300261029 S(ph)FEVEEVETPNST(ph)PPRR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 S(1)FEVEEVET(0.223)PNS(0.123)T(0.654)PPRR 69.922 0.0005774 8475500.0 328.35 396.7 484.27 421.45 541.27 278.97 298.97 345.91 459.88 410.13 269.85 True False 361.6838502815058 430.13130121877083 517.135474352078 447.4820093176038 503.25306248012913 276.6981608122087 310.3474669526613 339.0105536888545 440.5528428757789 384.2343218067763 236.66016072009 1.5282836332951182 1.8175061654230387 2.185139538393707 1.890821031964326 2.126479847511606 1.1691792990011263 1.3113633744199347 1.432478337956592 1.861542059023796 1.6235699352086121 1.0 7.886673053561552 -7.260192219508169 24.99329755510189 1.3956387870225104 1.9187865236667374 0.48159307950993446 0.26335333668297356 99.62751015962709 1996542.9004486185 0.05152753479438429 0.0861761252067062 5.4929769991049875e-08 7.260192219508169 0.523147736644227 S(ph)FEVEEVETPNSTPPR ddPTM_A549_MK2206_60min_R1 4 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(0.923)FEVEEVET(0.076)PNSTPPR 344.48 9.020899999999997e-211 128492000.0 12969.3 20761.699999999997 15715.2 13949.900000000001 22467.5 16675.5 12588.4 18247.3 23209.2 24207.2 20405.6 True False 15158.200771058033 21818.38184960936 17943.85166769139 17367.626126234805 19162.56051251728 18440.090341698968 14875.549333111092 20833.910655012565 17952.35325747651 18738.776707369445 15338.326354090184 0.9882565034232618 1.4224747437187744 1.1698702487775927 1.1323025553960442 1.2493253872778178 1.202223105442117 0.9698287146657506 1.3582910008598756 1.1704245197970544 1.2216963099349156 1.0 13.904853450892105 -10.425504374061765 0.6747019807299951 0.9915079503174383 1.1919093999670227 0.0 0.14351383929297698 0.8771858637489351 0.6907427254317522 0.09543687012073797 0.024772376109366025 3.754011735440339e-11 10.425504374061765 0.2004014496495844 S(ph)FEVEEVETPNSTPPR ddPTM_A549_PD325901_60min_R1 2 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR 254.53 1.5906999999999997e-77 23859000.0 2693.1 2894.7 3396.2 3432.8999999999996 4291.6 3091.4 3395.0 3556.9 3239.0 3557.2 3537.6 True False 2966.5015294445648 3138.6465279505337 3626.6865550096577 3644.942436318427 3990.1728212162575 3066.2246633504033 3524.198582815284 3485.9548391659305 3102.876093925909 3332.5977849244514 3102.4976266940503 0.9561656079671527 1.011651548399411 1.168957076326331 1.174841329436372 1.2861163170229701 0.9883084637900921 1.1359230551839579 1.123596295182499 1.0001219879198626 1.074166102900646 1.0 11.599214391405138 -8.76585326045598 24.39940530153091 1.0000575931862554 1.1100825659574889 0.11663934451789404 0.09204655342995496 88.094994799887 486977.537933893 0.0155852820758842 0.01687686874838739 1.7145365177410774e-09 8.76585326045598 0.11002497277123346 S(ph)FGNPFEGSR ddPTM_A549_PD325901_60min_R1 2 SFGNPFEGSR 10 0 Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4;F5GZ00 Q96RR4-6 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 1 S(0.999)FGNPFEGS(0.001)R;S(1)FGNPFEGSR 91.09299999999999 0.0006482 8640900.0 2986.2 2834.5 2947.8 3060.2 4039.9 3267.1000000000004 3082.7 3422.7 3131.6 3293.1000000000004 3975.3 True False 3289.3568256757476 3073.373262678614 3147.8554345614107 3249.221603781541 3756.1513608983946 3240.493820803552 3200.013835418167 3354.4315634437917 2999.989742432351 3085.1731039960396 3486.363301502959 0.9434922700849098 0.8815413073427241 0.902905165736566 0.931980210547998 1.0773838054339118 0.9294768044989994 0.9178658558156152 0.9621577768437696 0.8604925772190941 0.8849258775372125 1.0 11.767507200071378 -6.357227413435624 5.681407267612753 0.9436116870766308 0.906767205410794 0.07669428350228835 0.05616579360776677 0.557600067015917 26.650903496546714 0.0091573533375842 0.021611731987151855 4.3931151464966836e-07 6.357227413435624 -0.03684448166583676 S(ph)FGNPFEPQAR ddPTM_A549_PD325901_60min_R1 2 SFGNPFEPQAR 11 0 J3KPJ3;Q8N5S9;Q8N5S9-2 J3KPJ3 CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 1 1 S(1)FGNPFEPQAR;S(1)FGNPFEPQAR 80.469 0.00087177 4497600.0 2564.2 2879.2 2576.0 2589.5 3479.7 2789.5 3079.8 3150.8999999999996 2998.3999999999996 2631.3 3362.7 True False 2824.515696335729 3121.8402885532796 2750.8228507463873 2749.447533818804 3235.2978763133124 2766.783236855777 3197.0034743312267 3088.052827666767 2872.387675216873 2465.159268939532 2949.1092179116026 0.9577521507785649 1.0585705912797614 0.9327639797261795 0.9322976297791412 1.0970424074712204 0.9381759142901669 1.0840573332835632 1.0471137552014966 0.9739848418536837 0.8358996180837354 1.0 11.52606353711318 -5.698679043851235 24.99997999716334 0.9954103254371676 1.0081601817540624 0.0 0.07570888296540913 443.2150725311684 176540.39839447004 0.007427333140287095 0.02876592945563167 2.001340371498191e-06 5.698679043851235 0.012749856316894848 S(ph)FGNRVENDRER ddPTM_A549_PD325901_60min_R1 2 SFGNRVENDRER 12 2 O95104-2;O95104-3;O95104 O95104-2 SCAF4 Splicing factor, arginine/serine-rich 15 1 S(1)FGNRVENDRER;S(1)FGNRVENDRER 50.158 0.0097396 26789000.0 5220.8 4949.1 4691.200000000001 5147.9 5600.700000000001 5859.5 5586.9 5729.5 5549.5 5790.200000000001 6058.2 True False 5750.811772650171 5366.178025867964 5009.573042477268 5465.874091270832 5207.326153366088 5811.7821747110365 5799.512536768986 5615.220627794204 5316.273813906094 5424.6057838382885 5313.079806093934 1.0823876136876718 1.0099938682857967 0.9428755496447553 1.0287581385473727 0.9800956024401233 1.0938631428131582 1.0915538159462859 1.056867359935705 1.0006011593894177 1.0209908342834297 1.0 12.37533266790244 -5.259972259676011 23.55820001866666 1.0127633881052975 1.0823876662440417 0.09713896755962736 0.04402868231646464 82.03222351050302 1316904.6101526017 0.006296700932967633 0.054618346602660066 5.49575976603335e-06 5.259972259676011 0.06962427813874417 S(ph)FHIENK ddPTM_A549_MK2206_60min_R1 3 SFHIENK 7 0 A0A1B0GTU3;Q96L93-5;Q96L93-6;Q96L93-4;Q96L93;Q96L93-2;H0Y534 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(1)FHIENK;S(1)FHIENK;S(1)FHIENK 65.305 0.008352799999999999 15163000.0 2957.58 3839.94 3117.43 3293.7699999999995 5181.299999999999 3576.66 3255.18 3574.98 5989.8 5140.17 5239.299999999999 True False 3456.747198111373 4035.376544290161 3559.5284504435926 4100.743797862955 4419.137633626604 3955.13978720524 3846.604070267589 4081.7443629170825 4633.119863745106 3979.002026996893 3938.237212676165 0.8777397123223049 1.0246656883189589 0.9038380011712837 1.0412637879363191 1.122110577646909 1.0042919137716413 0.9767324471685879 1.0364394378731188 1.176445098033276 1.01035103070722 1.0 11.943334296674703 -5.378084634063011 0.5334365448245544 1.0746585980543704 0.8053307099820742 0.26923633828926785 0.06906246948456314 3.3094714572863704 0.6728511530507787 0.015530541608063242 0.5384408626108341 4.187119597808765e-06 5.378084634063011 -0.26932788807229613 S(ph)FHIENK ddPTM_A549_PD325901_60min_R1 3 SFHIENK 7 0 A0A1B0GTU3;Q96L93-5;Q96L93-6;Q96L93-4;Q96L93;Q96L93-2;H0Y534 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(1)FHIENK;S(1)FHIENK;S(1)FHIENK 84.213 0.0070969 24576000.0 5163.65 5582.549999999999 6061.7 6191.5 6756.4 6605.4 6200.3 5466.9 6967.9 5565.1900000000005 6193.3 True False 5687.859946721779 6053.011080460928 6473.08341396326 6573.93489308327 6281.85377231464 6551.60781241339 6436.255809434347 5357.858390799916 6675.063394524961 5213.802953638734 5431.563362563395 1.0471865220103824 1.1144141523195348 1.1917532728382507 1.2103209433942312 1.1565461641507861 1.2062103256623702 1.1849729773559694 0.9864302472707059 1.2289396162681796 0.9599083368104372 1.0 12.407151792230067 -11.000600347274517 1.21778440769586 0.9981016306735703 1.1564151604261852 0.4310180499864503 0.07237431783424059 0.4036243704573176 1.0438200636481063 0.05437903715451358 0.011771331472935484 9.986186043216834e-12 11.000600347274517 0.15831352975261492 S(ph)FILDK ddPTM_A549_MK2206_60min_R1 2 SFILDK 6 0 Q9BVP2-2;Q9BVP2 Q9BVP2-2 GNL3 Guanine nucleotide-binding protein-like 3 1 S(1)FILDK;S(1)FILDK 84.476 0.040484 22152200.0 1675.1 1805.33 1697.4099999999999 1496.1399999999999 2323.8 2131.4 2056.84 2313.5 3016.0 2410.6000000000004 2400.7 True False 1957.8159277369875 1897.2135858121094 1938.1282617628824 1862.694367164277 1981.9720983192465 2356.9433332911844 2430.5412038317972 2641.4457097966056 2332.880815562327 1866.0437857655904 1804.5399340506674 1.0849390976581272 1.0513558331476858 1.0740290226841076 1.0322267365860227 1.0983254296125746 1.3061186892110124 1.3469035281341428 1.4637779192103153 1.2927842557220044 1.0340828432523879 1.0 10.817415354757514 -7.019984280622052 21.331147560531406 1.1967128830060414 1.0614742428887871 0.2797975517228132 0.12859054524989094 183.8191874411902 196209.96455745003 0.024074534133663065 0.04217099180936291 9.55027152799752e-08 7.019984280622052 -0.13523864011725428 S(ph)FILDK ddPTM_A549_PD325901_60min_R1 2 SFILDK 6 0 Q9BVP2-2;Q9BVP2 Q9BVP2-2 GNL3 Guanine nucleotide-binding protein-like 3 1 S(1)FILDK;S(1)FILDK 101.64 0.032063 31076000.0 3855.9 3786.4 3795.7999999999997 3515.0 4274.1 3030.5499999999997 3966.6000000000004 3922.6 3507.9 2948.3900000000003 3750.8 True False 4247.348129436447 4105.493216371957 4053.4058139996623 3732.1135668558004 3973.901960844533 3005.8702055756517 4117.551133606807 3844.3606657798273 3360.4751620508505 2762.2281522246153 3289.4753782802036 1.291193166387838 1.248069295024905 1.2322347328584824 1.1345619400279616 1.208065573946372 0.9137840718987762 1.2517348999765232 1.168685040527565 1.021583923150617 0.8397169258244327 1.0 11.683641798864278 -2.0000000000000036 0.15031490495898542 0.953343502627724 2.2396134214107364 0.5433719576249529 0.09795766507056776 33.62324493198793 0.3151643741240641 0.14936518667917312 9.517717690844709 0.009999999999999919 2.0000000000000036 1.2862699187830122 S(ph)FLESNYFTKPNLK ddPTM_A549_PD325901_60min_R1 1 SFLESNYFTKPNLK 14 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(1)FLESNYFTKPNLK 86.213 3.3945999999999997e-05 5571000.0 4249.5 4364.7 4505.0 4858.1 5585.0 4866.1 4796.5 4644.6 4933.7 6304.1 5521.1 True False 4680.90611168344 4732.528586915983 4810.736390765711 5158.173803454382 5192.728867204028 4826.472094950312 4979.033432245511 4551.9598093817895 4726.353746403912 5906.0580501355635 4842.039701136511 0.966721960289741 0.9773832680069056 0.9935350983670265 1.065289448627129 1.0724259171161286 0.9967849073640298 1.0282925666794605 0.9400913851064387 0.9761080119385543 1.2197458952575932 1.0 12.241399193077406 S(ph)FNDFR ddPTM_A549_MK2206_60min_R1 4 SFNDFR 6 0 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 S(1)FNDFR;S(1)FNDFR;S(1)FNDFR;S(1)FNDFR 100.84 0.032819 53145800.0 6905.71 7518.280000000001 7022.64 7343.48 11128.32 9511.289999999999 8898.970000000001 9722.39 13207.34 11270.13 12824.64 True False 8071.225019600379 7900.9283388297235 8018.555950646274 9142.632929661344 9491.358869596363 10517.768394716677 10515.797658866544 11100.56855607063 10215.898577788119 8724.199805554776 9639.927945942252 0.8372702643485848 0.8196045015207268 0.831806627146164 0.948412994467429 0.9845881548929598 1.0910629678662624 1.0908585331587435 1.1515198680238277 1.0597484374443182 0.9050067442907667 1.0 13.234806647671236 -6.546678857650726 1.7113125700952567 1.0475560817060214 0.823506462526247 0.7073552691642173 0.059968903002083546 0.12755710790128355 0.7374050275425271 0.007659522685211953 0.021617643145243205 2.840018325270889e-07 6.546678857650726 -0.2240496191797744 S(ph)FNDFR ddPTM_A549_PD325901_60min_R1 2 SFNDFR 6 0 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 S(1)FNDFR;S(1)FNDFR 78.113 0.044222000000000004 97781000.0 2524.8999999999996 2515.7 2913.6 2735.38 2819.32 2683.3 2780.1000000000004 2854.87 3150.2 3115.0 3076.5 True False 2781.2259892668612 2727.706867849919 3111.3344169001048 2904.338210101285 2621.300689325991 2661.448094445279 2885.8982268290924 2797.9273782478103 3017.808049115593 2918.3183683907737 2698.110003540324 1.0308052620602852 1.0109694802179152 1.1531532861216067 1.0764343211693959 0.9715321784087572 0.9864120035702995 1.0695999136589547 1.0369952946975887 1.1184896261293191 1.0816157845905108 1.0 11.397733453677283 -11.244018149536245 1.7375709418114493 0.9999562890068973 1.0605180677398494 0.0 0.057053100873114285 0.6238079719572737 3.3977083483841475 0.04210861265998871 0.008603242828752045 5.701404451281372e-12 11.244018149536245 0.0605617787329521 S(ph)FNLNK ddPTM_A549_MK2206_60min_R1 2 SFNLNK 6 0 O14544;J3KTM7 O14544 SOCS6 Suppressor of cytokine signaling 6 1 S(1)FNLNK;S(1)FNLNK 80.438 0.042856 10670600.0 3970.2 5892.0 4773.700000000001 3976.7 6403.5 4372.7 3680.8999999999996 5208.4 6390.8 6824.1 7194.3 True False 4640.272697929311 6191.87763323323 5450.682441588936 4950.991678520846 5461.553632665155 4835.416211636652 4349.671883658653 5946.706650056037 4943.294004010518 5282.53107045672 5407.756757421055 0.8580771854358044 1.1449992873174495 1.0079377986276794 0.9155352026007103 1.0099480944978294 0.8941630381213096 0.804339410734332 1.0996623769912324 0.9141117520174782 0.9768433210697784 1.0 12.400814544870459 -6.105005859123438 7.532083078097585 0.9542670480858937 1.0197438557354748 0.050168935592984853 0.09433079938053793 0.5075883856801796 32.087831787535436 0.012213963127556167 0.032593062871414086 7.852250409652793e-07 6.105005859123438 0.06547680764958108 S(ph)FNLNK ddPTM_A549_PD325901_60min_R1 2 SFNLNK 6 0 O14544;J3KTM7 O14544 SOCS6 Suppressor of cytokine signaling 6 1 S(1)FNLNK;S(1)FNLNK 80.438 0.042856 18283600.0 6177.6 7242.700000000001 7504.6 7918.1 8429.599999999999 8541.0 7603.6 8482.8 7585.1 8110.200000000001 9154.599999999999 True False 6804.745404291242 7853.067747257859 8013.90728482583 8407.18305369016 7837.533976541278 8471.444927759529 7892.959158849574 8313.603899372138 7266.324624895778 7598.120587904612 8028.642235790753 0.8475586785965475 0.9781314843311608 0.9981647020091098 1.0471487963695674 0.9761966900956757 1.0551528737941283 0.9831001216698485 1.0354931326135144 0.9050502452959416 0.9463767801276627 1.0 12.970940311593136 -5.261450304221629 12.412165769406197 0.9782261406088687 0.8474843957255281 0.445724691861599 0.04391746236567051 0.05209980142565842 906.5903695540347 0.0071651952930826095 0.056979818765998086 5.4770877101086296e-06 5.261450304221629 -0.13074174488334056 S(ph)FNTSESKVEFK ddPTM_A549_PD325901_60min_R1 1 SFNTSESKVEFK 12 1 Q96S38-2;Q96S38;F5H7T0;F6RJM5;A0A087X1U5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 S(0.987)FNT(0.011)S(0.001)ESKVEFK 53.828 0.0061032 4519500.0 3528.1 3354.7 3166.2 3564.1 4035.3 4232.2 3430.8 4057.8 3194.4 3606.1 4822.8 True False 3886.2701147500547 3637.4123423206715 3381.0773719073013 3784.246362341608 3751.874449029257 4197.734366381439 3561.3609714057948 3976.8639957174796 3060.150476825232 3378.4102305791253 4229.6261742481 0.9188211805599856 0.8599843561747614 0.7993797164611964 0.8946999584459335 0.8870463474697565 0.9924598991606319 0.8420037196405181 0.9402400665880233 0.7235037685970521 0.7987491308684519 1.0 12.046314444368814 -11.208036306694313 1.6593758366581757 0.9999121364704435 0.8522433236000024 0.0 0.0915539931643687 0.37836807976659353 1.8777336767355834 0.059820235551626695 0.012482724821827627 6.193892924300911e-12 11.208036306694313 -0.1476688128704411 S(ph)FPDIEDEEK ddPTM_A549_MK2206_60min_R1 2 SFPDIEDEEK 10 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(1)FPDIEDEEK;S(1)FPDIEDEEK 174.24 1.208e-10 10471700.0 4642.8 5467.5 4771.0 4458.9 6240.200000000001 5947.4 5337.8 5220.9 6071.1 6555.4 6637.200000000001 True False 5426.3911344381195 5745.772396419334 5447.599540989334 5551.330700167624 5322.274846342958 6576.749920435391 6307.609166397662 5960.978563335681 4696.005543554528 5074.530587076973 4989.000062598865 1.0876710896674973 1.1516881788584807 1.0919221231982859 1.1127140971162526 1.0668019201367747 1.3182501178421386 1.2643032846770317 1.1948243111928314 0.9412718950956055 1.0171438210873769 1.0 12.284534972110464 -8.76171150897318 24.999999916441432 0.9722672759305357 1.1623401785605236 0.5171906040215195 0.07491892491698965 4.01187783963109 368558.4774111201 0.013723475697219318 0.015062903505492336 1.7309658149506853e-09 8.76171150897318 0.19007290262998788 S(ph)FPDIEDEEK ddPTM_A549_PD325901_60min_R1 2 SFPDIEDEEK 10 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(1)FPDIEDEEK;S(1)FPDIEDEEK 137.4 4.1954999999999997e-07 10050800.0 6741.0 6806.299999999999 7370.8 6410.8 7154.4 6406.3 6700.5 7081.0 7564.0 10564.599999999999 11275.7 True False 7425.341357538087 7379.890787711928 7871.026812221069 6806.78055601683 6651.8996253401065 6354.129216801997 6955.4911941542905 6939.763900062961 7246.111384518552 9897.549353034086 9888.86038255148 0.7508793804632757 0.7462832421755561 0.7959488260254132 0.6883281078603493 0.6726659461263232 0.642554244977876 0.7033663056288054 0.7017759005181134 0.7327549489225311 1.0008786624693313 1.0 13.271588555376082 -10.44964325362793 0.686349116383041 1.0111948939685267 0.7106259107412767 0.8786060819907439 0.04076297153138001 0.22239739000159517 0.18049367845334294 0.03677444410554505 0.009433617321509746 3.551049664860869e-11 10.44964325362793 -0.30056898322725 S(ph)FQDYTGQK ddPTM_A549_PD325901_60min_R1 1 SFQDYTGQK 9 0 A0A087WXU5;A0A087WYV3;A0A0D9SEW3;A0A087WXF8;Q9NP64-2;Q9NP64-3;Q9NP64 A0A087WXU5 ZCCHC17 Nucleolar protein of 40 kDa 1 S(1)FQDYTGQK 69.815 0.0038383000000000002 3845800.0 4767.0 5297.5 4897.9 5167.9 5092.5 5381.6 4689.5 4588.5 5588.6 5294.5 6037.3 True False 5250.94233072008 5743.938916577865 5230.300947465341 5487.109445847535 4734.820368171261 5337.774033863792 4867.961488692867 4496.978767891386 5353.7305768800115 4960.204366434975 5294.750373597916 0.991726136307335 1.0848365855394828 0.9878276742839568 1.0363301494266492 0.8942480823612146 1.008125720237995 0.9193939553726239 0.849327815399081 1.011139373741999 0.9368155279177762 1.0 12.370346953155112 -3.835680382270604 7.744777062250655 0.9896477510092213 0.9931980013236946 0.0 0.06652129383311171 0.0 0.0 0.0084212685240628 0.0 0.00014598882654386858 3.835680382270604 0.0035502503144733133 S(ph)FQGDDSDLLLK ddPTM_A549_MK2206_60min_R1 2 SFQGDDSDLLLK 12 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(1)FQGDDSDLLLK;S(1)FQGDDSDLLLK 165.34 1.8001e-14 23426000.0 3106.33 3924.7 4156.299999999999 3729.8999999999996 6783.099999999999 6126.8 5398.200000000001 5425.8 8239.099999999999 7781.4 8084.0 True False 3630.6025615230365 4124.450466250927 4745.725837814707 4643.725667441573 5785.314975518236 6775.133909359309 6378.983064567401 6194.92376581561 6372.957005139116 6023.5763355829895 6076.519692950226 0.5974805883925859 0.6787520940705541 0.7809940685818131 0.7642081161736491 0.9520770552640788 1.114969464711781 1.0497757576541853 1.019485507963177 1.0487840617932673 0.9912872236012565 1.0 12.56902954594048 -6.620488200230223 1.4998126678697317 1.0323149458000949 0.6657860186132073 0.9097160903050536 0.04948100651951152 0.08375073553160024 0.373189787671615 0.007616705276742719 0.021773664312726346 2.3961378518642574e-07 6.620488200230223 -0.36652892718688757 S(ph)FQGDDSDLLLK ddPTM_A549_PD325901_60min_R1 4 SFQGDDSDLLLK 12 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(1)FQGDDSDLLLK;S(1)FQGDDSDLLLK;S(1)FQGDDSDLLLK;S(1)FQGDDSDLLLK 181.51 4.1813000000000005e-19 46314300.0 11568.100000000002 13026.9 13111.6 11994.3 16981.4 13281.5 14705.400000000001 13511.0 15323.0 16013.5 18263.9 True False 12742.48499601489 14124.722580909522 14001.432022455863 12735.160669968285 15788.685046649682 13173.339867467295 15265.022044103638 13241.512505825536 14679.027597167866 15002.404877118997 16017.55608440114 0.7955324101174391 0.8818275713524754 0.8741303572578903 0.795075141479951 0.9857112385593988 0.8224313246073967 0.9530181735383237 0.8266874444548328 0.9164336631518454 0.9366225907414953 1.0 13.967366421560643 -14.99999999451699 0.09949404976380574 1.4377085751778844 0.782468130410563 0.2966711374223704 0.05926422510010555 64.71871296235564 0.4635166646442239 5.79903674275846 0.3579441543281951 1.0000000126250963e-15 14.99999999451699 -0.6552404447673215 S(ph)FQKFSDLTQHK ddPTM_A549_PD325901_60min_R1 2 SFQKFSDLTQHK 12 1 D6RGC2;Q8TF20;Q8TF20-2 D6RGC2 ZNF721 Zinc finger protein 721 1 S(0.497)FQKFS(0.497)DLT(0.006)QHK;S(0.497)FQKFS(0.497)DLT(0.006)QHK 47.201 0.01515 10132100.0 2071.3 2015.08 1821.44 1812.7 2734.9 2547.8 1851.85 2254.37 3054.0 2678.2 3302.8999999999996 True False 2281.576851189532 2184.897863523876 1945.0538716084998 1924.6663620596048 2542.8100588928 2527.0515615203976 1922.323165121202 2209.404821830948 2925.6510005710807 2509.097994935528 2896.664238808169 0.7876566502330576 0.7542806771498138 0.671480610541452 0.6644423389752303 0.8778408021286712 0.8724005798339097 0.6636334095497864 0.7627410841168137 1.0100069457048422 0.8662025654612613 1.0 11.50017675177662 -8.756610777493554 9.412533751268846 1.0047893752250503 0.755470275340743 0.531631496371729 0.08133146709272672 0.0461738217868699 48.46833096557296 0.012325439479717737 0.0136209981645096 1.7514156355755389e-09 8.756610777493554 -0.24931909988430734 S(ph)FSEDTLMDGPAR ddPTM_A549_MK2206_60min_R1 3 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 S(0.628)FS(0.318)EDT(0.054)LMDGPAR;S(0.997)FS(0.003)EDTLMDGPAR;S(0.95)FS(0.05)EDTLMDGPAR 175.21 6.2902e-22 19114400.0 7066.299999999999 8110.9 6336.6 5881.299999999999 10107.400000000001 7358.3 6793.300000000001 7402.4 10036.5 9201.900000000001 10209.9 True False 8258.918685551842 8523.710165545053 7235.225162740104 7322.218764021589 8620.614849191823 8136.950421955767 8027.554676100502 8451.712868899236 7763.248774997118 7123.184399002896 7674.500051095064 1.076150710869223 1.1106534769426208 0.9427617583646662 0.9540971679291071 1.1232803168672543 1.060258045186242 1.046003599277462 1.1012721105778445 1.0115641049333748 0.9281626622683387 1.0 12.905857055040835 -8.968826340528327 24.76238148673186 1.0051017729530305 1.0497913302328863 0.19342851446112186 0.05964453459134245 268.7493253303868 213478.91524777442 0.009807388305383689 0.01034577450838086 1.0744189497538461e-09 8.968826340528327 0.044689557279855796 S(ph)FSEDTLMDGPAR ddPTM_A549_PD325901_60min_R1 2 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 S(0.936)FS(0.058)EDT(0.005)LMDGPAR;S(0.754)FS(0.227)EDT(0.019)LMDGPAR 81.278 0.00022012 34983000.0 10797.2 11459.2 12076.8 11696.8 12423.900000000001 12006.2 11397.9 12189.0 12702.1 12907.0 12547.3 True False 11893.323795521464 12424.907000065905 12896.40427169796 12419.284770639812 11551.28812412821 11908.425487842918 11831.653321670194 11945.880832914487 12168.274909742602 12092.049817277602 11004.061643888019 1.0808121746689203 1.1291200833073365 1.1719676505866363 1.1286091601947585 1.0497294997019702 1.08218454905305 1.0752078373026785 1.0855883236122712 1.1057985045459302 1.0988715084119767 1.0 13.42574850620302 -14.999999999857637 0.19841452798553638 0.5191263568068247 1.121578614596705 0.012954535971415604 0.04251573700172178 24.94221147109835 0.29229678766696193 4.661199922449862 0.02907319715261236 1.000000000327802e-15 14.999999999857637 0.6024522577898803 S(ph)FSEDVFQSVK ddPTM_A549_MK2206_60min_R1 2 SFSEDVFQSVK 11 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.992)FS(0.008)EDVFQSVK;S(0.997)FS(0.003)EDVFQSVK 124.86 4.1605e-06 3359100.0 2135.81 2537.7 2327.7 1859.1599999999999 2918.6 2660.8 2128.3 2671.5 4108.9 2966.7 3746.0 True False 2496.2825124589212 2666.8580906069205 2657.802861362582 2314.654283460862 2489.277806246041 2942.3640899039074 2514.9845608385763 3050.1933061256213 3178.2407105650022 2296.5204095373665 2815.7648156595164 0.8865380015320047 0.9471167747304498 0.9439008707621996 0.8220339534709036 0.8840503270735682 1.044960883643522 0.8931799086528146 1.0832557069973887 1.1287308843727368 0.8155938296996829 1.0 11.45931112380379 -7.944849589761617 1.426521408900943 1.062876697556532 0.9067346470698445 0.025173878472630196 0.09751879582736608 0.25204225165907185 1.0323672021112138 0.012382152331595623 0.018236251875942376 1.1354039747391126e-08 7.944849589761617 -0.1561420504866875 S(ph)FSEDVFQSVK ddPTM_A549_PD325901_60min_R1 1 SFSEDVFQSVK 11 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.841)FS(0.156)EDVFQS(0.003)VK 44.299 0.057692999999999994 956170.0 1573.8 1274.1 1178.7 1738.9 1556.8 1350.7 1661.6 1880.8 1826.9 1849.5 1739.2 True False 1733.5710174296735 1381.4728784543395 1258.6936700988997 1846.3079036715644 1447.4557386684376 1339.700347023157 1724.8330972624083 1843.2859685409428 1750.1217462158825 1732.7222543623557 1525.289425697166 1.1365521770645646 0.9057119620578946 0.825216282820283 1.2104639765844243 0.9489712013225602 0.8783253358036088 1.1308234805824058 1.208482755788089 1.1474030546143412 1.1359957167279109 1.0 10.574867306616222 -7.784257646670094 24.996941090942027 1.0881740114329406 0.98209478131878 0.24107367713970873 0.11606538509202921 342.73148724587213 375453.8965420283 0.018933571507877257 0.026170015337124822 1.6433964834399198e-08 7.784257646670094 -0.10607923011416054 S(ph)FSEDVISHK ddPTM_A549_MK2206_60min_R1 2 SFSEDVISHK 10 0 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-8;H0YC82;Q03001-10;A0A494C1D7;F6QMI7 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 S(0.803)FS(0.197)EDVISHK;S(0.494)FS(0.494)EDVIS(0.012)HK 90.697 0.00020181 7003000.0 1288.42 1322.21 1044.31 1045.8200000000002 1724.13 1327.97 1448.35 1631.77 1976.3500000000001 1905.1799999999998 2020.9899999999998 True False 1505.8737971553285 1389.5048413844725 1192.4088611717823 1302.0459469486445 1470.5127609411995 1468.4949039648568 1711.4964472539355 1863.07839458604 1528.7098805824298 1474.7985147950246 1519.1224065135414 0.9912787743098207 0.9146760230951057 0.7849327059222421 0.8571040367556044 0.9680014952291414 0.9666731908293834 1.1266349834059137 1.226417559636879 1.0063111925857853 0.9708226989948479 1.0 10.569022407402082 -7.116432006032401 2.271683085209807 1.030723769992616 0.8837401259163159 0.43485010631783594 0.08516487431861382 0.26676043163908714 2.6966396790797806 0.013862026837818188 0.02647822279497295 7.648354231497781e-08 7.116432006032401 -0.14698364407630005 S(ph)FSEDVISHK ddPTM_A549_PD325901_60min_R1 1 SFSEDVISHK 10 0 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-8;H0YC82;Q03001-10;A0A494C1D7;F6QMI7 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 S(0.955)FS(0.045)EDVISHK 112.84 3.7904e-05 5115100.0 1198.9 918.45 1054.2 907.79 1083.4 720.79 1067.5 1070.6 1115.5 1031.5 1150.7 True False 1320.6114454164683 995.8510048005553 1125.7443514195809 963.862126559325 1007.3057215270975 714.9201252171626 1108.1242966584136 1049.246043130547 1068.6194142557438 966.3709139631085 1009.1711948882992 1.3086099287273465 0.9868008617812182 1.115513757350342 0.9551026936178165 0.9981514797780091 0.7084230394589236 1.098053830976683 1.039710654094406 1.058907962958678 0.9575886815418586 1.0 9.978955217348465 S(ph)FSEGGER ddPTM_A549_MK2206_60min_R1 1 SFSEGGER 8 0 Q07352;G3V2D5;G3V2P5;G3V515 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 S(0.992)FS(0.008)EGGER 48.698 0.034927 70270000.0 408.62 628.24 642.93 420.0 934.15 724.91 822.63 723.39 899.04 857.27 917.46 True False 477.5850662001603 660.214732570001 734.1071416659556 522.9000188545167 796.7377724610227 801.6194950436868 972.0912227048058 825.9327477889627 695.4088754718687 663.612111600127 689.6293613921468 0.6925242643904617 0.957347191884686 1.0644951951929975 0.7582334049683506 1.1553130087916461 1.1623917714661494 1.4095850280249906 1.1976473074198317 1.0083806090681156 0.9622735758531233 1.0 9.42967738913371 -4.657931827242511 0.918560873561181 1.0583810926329063 1.3023573622872332e-10 0.34424924752301 0.15546984389032173 5.592797754312872 1.6295632992676352 0.025170812599232942 7.727309972753379 2.1982049057865393e-05 4.657931827242511 -1.0583810925026704 S(ph)FSEHDLAQLR ddPTM_A549_PD325901_60min_R1 1 SFSEHDLAQLR 11 0 Q8WWL2-4;Q8WWL2-3;Q8WWL2-2;Q8WWL2 Q8WWL2-4 SPIRE2 Protein spire homolog 2 1 S(0.555)FS(0.445)EHDLAQLR 90.926 7.234e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)FSGLIK ddPTM_A549_MK2206_60min_R1 1 SFSGLIK 7 0 Q14CB8-6;Q14CB8-7;Q14CB8;Q14CB8-2;Q14CB8-4;Q14CB8-3 Q14CB8-6 ARHGAP19 Rho GTPase-activating protein 19 1 S(0.989)FS(0.011)GLIK 57.59 0.034805 1473600.0 682.92 1039.0 493.65 615.65 1506.0 992.67 1368.5 1276.9 1856.6 1479.9 1487.9 True False 798.1802002090288 1091.8806620721875 563.656992959419 766.4842776375787 1284.4693949861364 1097.7136805189828 1617.1387358490772 1457.904485342246 1436.0830643809736 1145.5895621648122 1118.4133660490643 0.7136719073992299 0.9762764781052226 0.5039791279950526 0.6853318289151717 1.1484746462961954 0.9814919186783275 1.4459222188678083 1.3035470869706045 1.2840360353114497 1.0242988835261788 1.0 10.127237792098835 -6.765681265723884 24.301439399407474 1.1631138366912879 0.7227166393866188 0.6264215296972838 0.16706529375415446 41.1345556327535 235659.72747955847 0.02607388903642977 0.050568297206651076 1.7152156644083703e-07 6.765681265723884 -0.4403971973046691 S(ph)FSGLIK ddPTM_A549_PD325901_60min_R1 2 SFSGLIK 7 0 Q14CB8-6;Q14CB8-7;Q14CB8;Q14CB8-2;Q14CB8-4;Q14CB8-3 Q14CB8-6 ARHGAP19 Rho GTPase-activating protein 19 1 S(0.998)FS(0.002)GLIK;S(0.999)FS(0.001)GLIK 66.27 0.024399 6291100.0 3728.5 3684.4 4057.3 3678.1000000000004 4413.2 4009.9 3768.8999999999996 4465.5 4611.5 4295.2 4017.1000000000004 True False 4107.014575223369 3994.8973184029264 4332.652776526907 3905.287883428824 4103.232056713485 3977.244703878107 3912.3275519212148 4376.432099383019 4417.69469192323 4024.0003389765825 3523.0221664949877 1.1657646137689188 1.133940443632633 1.2298113868631746 1.108505055849293 1.16469095645678 1.1289297983143318 1.1105032460847506 1.242238025353408 1.2539502969742427 1.1422012547198963 1.0 11.782597836813098 -10.965738713223992 1.248199811125976 1.0005486982335599 1.1768144658345445 0.15592653832794956 0.0635356495713859 0.25636712755799634 0.7138920862769499 0.03807873993009709 0.008935639790954205 1.0820847756112685e-11 10.965738713223992 0.17626576760098467 S(ph)FSKEVEER ddPTM_A549_MK2206_60min_R1 2 SFSKEVEER 9 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.986)FS(0.014)KEVEER;S(0.997)FS(0.003)KEVEER 105.66 0.00015591 495160000.0 21753.0 20891.9 18675.9 14646.7 17210.9 10307.4 11077.2 8477.400000000001 16196.6 15152.3 14493.8 True False 25424.374590211173 21955.208473480212 21324.423447403642 18235.14215751534 14679.19940914137 11398.122226501631 13089.783854400728 9679.097410948669 12528.095960655446 11729.384906270621 10894.589451469808 2.3336698187173197 2.0152396353511235 1.957340709569072 1.6737796535375828 1.347384357577694 1.046218609455163 1.2014939996325205 0.8884315883645202 1.1499374085147613 1.0766247740237875 1.0 13.411324210928614 -6.467961789316444 0.9506663195219349 1.0561021265170754 2.262497803174053 0.9586775937723868 0.09464108313597117 0.08900258695512986 0.14016690678625937 0.015277805841168062 0.07107762766009715 3.4043814127161745e-07 6.467961789316444 1.2063956766569774 up S(ph)FSKEVEER ddPTM_A549_PD325901_60min_R1 6 SFSKEVEER 9 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.973)FS(0.027)KEVEER;S(0.878)FS(0.122)KEVEER;S(0.981)FS(0.019)KEVEER;S(0.979)FS(0.021)KEVEER;S(0.955)FS(0.045)KEVEER;S(0.5)FS(0.5)KEVEER 114.87 5.9198999999999993e-05 534798700.0 49658.7 53705.200000000004 54018.399999999994 56771.9 62297.7 63510.399999999994 60111.5 60087.9 63811.8 63699.600000000006 64749.299999999996 True False 54700.01466719721 58231.1256824158 57684.41346302738 60278.57132466023 57922.12446739767 62993.19235920599 62399.07602677497 58889.399696454326 61130.011957512 59677.59638495828 56785.54657963059 0.9632735433917357 1.025456814098955 1.0158291490975844 1.0615125671130305 1.0200152671978469 1.1093173554448472 1.0988548985660023 1.0370490951227087 1.0765065344891793 1.0509293293720816 1.0 15.793236152037464 -4.774854760482696 1.0401441659230657 1.0464797857926582 0.8239483021518208 0.3956224304056347 0.032175719065775675 4.446258881699962 1.8792529507653644 0.005814023002622536 1.399920531708538 1.67936554830845e-05 4.774854760482696 -0.2225314836408374 S(ph)FSKEVEERS(ph)R ddPTM_A549_PD325901_60min_R1 2 SFSKEVEERSR 11 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 2 S(0.829)FS(0.171)KEVEERS(1)R;S(0.506)FS(0.494)KEVEERS(1)R 90.45299999999999 9.4563e-05 26412000.0 6648.8 7232.1 6446.299999999999 6120.700000000001 7177.0 5223.2 5626.0 7034.0 6947.3 6634.5 7010.1 True False 7323.781281412141 7841.574448057158 6883.784682750943 6498.761737881735 6672.912279305874 5180.663990946438 5840.100508665328 6893.701351933746 6655.329140886536 6215.596537749149 6147.902140685203 1.1912651037408806 1.275487844245873 1.1196965282182783 1.0570698083944172 1.0853966323156465 0.8426718370583948 0.9499338758203509 1.1213095449768204 1.0825366098206597 1.011010975047238 1.0 12.585878485755869 -6.057091818901103 2.123656889413458 1.0282873430982713 1.235281167938811 0.5476102258328933 0.07505250496021235 0.2025617616344825 1.753891298273565 0.011337330312514991 0.043591040534721626 8.768154244985909e-07 6.057091818901103 0.20699382484053963 S(ph)FSLSWR ddPTM_A549_PD325901_60min_R1 1 SFSLSWR 7 0 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7;A0A3B3IS41 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.497)FS(0.497)LS(0.006)WR 53.968 0.043608 3313300.0 562.56 354.79 660.33 399.55 452.43 513.37 426.97 270.08 485.85 606.13 680.8 True False 619.6706770652164 384.6893984356133 705.1439646868638 424.22929605611256 420.6528775987678 509.18928492728134 443.2185769969489 264.69304252633873 465.4314140888866 567.8588483572069 597.0659159467745 1.0378597413027628 0.6442997132495946 1.1810152712681794 0.7105233856523315 0.7045333963365394 0.8528192136371642 0.7423277148455745 0.4433229823655431 0.7795310394679732 0.9510823398062279 1.0 9.221746403274874 -4.409681098798906 22.911716860777346 0.8420662447611107 0.8213158986264296 0.0 0.1996245947093284 0.0 0.0 0.02608155202006801 0.0 3.893309246469143e-05 4.409681098798906 -0.020750346134681075 S(ph)FSMHDLTTIQGDEPVGQRPYQPLPEAK ddPTM_A549_MK2206_60min_R1 3 SFSMHDLTTIQGDEPVGQRPYQPLPEAK 28 1 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 S(0.5)FS(0.5)MHDLTTIQGDEPVGQRPYQPLPEAK;S(0.499)FS(0.499)MHDLT(0.002)TIQGDEPVGQRPYQPLPEAK;S(0.466)FS(0.466)MHDLT(0.034)T(0.034)IQGDEPVGQRPYQPLPEAK 148.02 3.5247e-36 29795600.0 4290.700000000001 5124.61 4758.49 4646.370000000001 5809.109999999999 5011.719999999999 4263.88 5294.25 7623.81 7417.96 7175.540000000001 True False 5014.865262456626 5385.430760020939 5433.315434877877 5784.730858583474 4954.597614281485 5542.056883889506 5038.571803443305 6044.726150460635 5897.029207722891 5742.2376840030365 5393.655383170717 0.9297711674542664 0.9984751300249102 1.0073530933828119 1.0725065744157463 0.9185973634394256 1.027514086491664 0.9341664317606676 1.1207104868659923 1.093327027552187 1.0646282114945582 1.0 12.397047631064424 -8.252551361944377 24.98965002026407 1.0510504494022388 0.9880614557897998 0.36596497534382577 0.05198437721735088 762.5987142950322 2144128.8739287164 0.00905441680707964 0.01160804067330014 5.590474077807719e-09 8.252551361944377 -0.06298899361243904 S(ph)FSMHDLTTIQGDEPVGQRPYQPLPEAK ddPTM_A549_PD325901_60min_R1 7 SFSMHDLTTIQGDEPVGQRPYQPLPEAK 28 1 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 S(0.5)FS(0.5)MHDLTTIQGDEPVGQRPYQPLPEAK;S(0.5)FS(0.5)MHDLTTIQGDEPVGQRPYQPLPEAK;S(0.506)FS(0.476)MHDLT(0.009)T(0.009)IQGDEPVGQRPYQPLPEAK;S(0.5)FS(0.5)MHDLTTIQGDEPVGQRPYQPLPEAK;S(0.43)FS(0.43)MHDLT(0.07)T(0.07)IQGDEPVGQRPYQPLPEAK;S(0.492)FS(0.492)MHDLT(0.014)T(0.002)IQGDEPVGQRPYQPLPEAK;S(0.768)FS(0.221)MHDLT(0.005)T(0.005)IQGDEPVGQRPYQPLPEAK 128.6 1.667e-27 74453100.0 11287.769999999999 11304.460000000001 12084.000000000002 13772.16 13335.1 14219.550000000001 12532.16 14731.989999999998 14196.3 14035.599999999999 15309.4 True False 12433.696100782923 12257.126517205823 12904.092906995089 14622.835044355263 12398.488579597557 14103.75069927678 13009.078206661083 14438.148902427414 13599.678879963074 13149.389820669523 13426.440854282531 0.9260604679770396 0.9129095826833556 0.9610955760386168 1.0891073221159073 0.923438215246962 1.050445970927449 0.9689148708767205 1.0753519163510996 1.0129027511878017 0.9793652661476075 1.0 13.712789298433197 -6.00862160566238 14.405295651393883 1.0107309407092733 0.9238543696774162 0.3958691316475621 0.045219612622398514 1.0408921109589586 1744.7469201766237 0.005334805518989737 0.015344289443274865 9.803437723903623e-07 6.00862160566238 -0.08687657103185709 S(ph)FSPLQPGQAPTGR ddPTM_A549_MK2206_60min_R1 1 SFSPLQPGQAPTGR 14 0 Q7Z3C6;H7C152;Q7Z3C6-2;H7C1G6 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 S(0.5)FS(0.5)PLQPGQAPTGR 165.86 8.259199999999999e-20 9077100.0 2461.9 3291.9 2913.4 2323.7 3703.0 2556.5 2168.6 2503.9 4132.0 3849.7 3920.2 True False 2877.408532323856 3459.4436491582624 3326.5639284674785 2893.0066043148586 3158.2936053344383 2827.027133132644 2562.6065491869267 2858.835492872149 3196.1085974481243 2980.0500962672327 2946.7061479841004 0.9764830247129825 1.1740036079012954 1.128909284267536 0.9817764171341011 1.071804736110212 0.9593854938900741 0.8696512039179938 0.970180041477137 1.0846377062859305 1.0113156679385704 1.0 11.524887483575494 -6.258300858781967 24.878830366543625 1.0170159617690853 1.1012191373369131 0.22701881533730373 0.07260919208969142 336.3604850491878 2666288.3837219607 0.010928221797090467 0.027697324776739436 5.516951184502563e-07 6.258300858781967 0.08420317556782786 S(ph)FSSQRPVDR ddPTM_A549_MK2206_60min_R1 3 SFSSQRPVDR 10 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.711)FS(0.273)S(0.017)QRPVDR;S(0.757)FS(0.176)S(0.067)QRPVDR;S(0.789)FS(0.198)S(0.013)QRPVDR 90.861 0.0001821 551089000.0 9166.599999999999 9606.2 9687.3 8687.6 11912.9 9135.0 9353.0 9367.6 14024.0 14143.8 14988.6 True False 10713.697978146904 10095.114548602358 11061.104806838395 10816.062390001183 10160.528190923207 10101.659636677756 11052.31903280702 10695.485987071832 10847.586391726161 10948.705756704287 11266.516955684534 0.9509325748399371 0.8960279905768798 0.9817679102020525 0.960018294255877 0.9018340123117377 0.8966089232733948 0.9809880974111134 0.9493161044483595 0.9628163197547046 0.9717915305830259 1.0 13.459753954738725 -9.424312616617303 0.5030821855612457 0.9991363462580702 0.9341022907936201 0.27264234039477553 0.02964806556139868 0.6340624770933346 0.3677498702560013 0.01626877420933767 0.009047296499273905 3.7643273522954634e-10 9.424312616617303 -0.06503405546445018 S(ph)FSSQRPVDR ddPTM_A549_PD325901_60min_R1 2 SFSSQRPVDR 10 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.757)FS(0.176)S(0.067)QRPVDR;S(0.762)FS(0.223)S(0.015)QRPVDR 64.441 0.0016869 23439000.0 4358.5 4244.6 5059.4 5123.2 5293.5 4868.0 4396.9 4992.9 5018.0 5077.9 5463.6 True False 4800.971711441884 4602.307338424996 5402.761308643738 5439.648428368603 4921.702821583614 4828.356621980259 4564.226435575999 4893.3126926457235 4807.110910565057 4757.280527400162 4791.611836613983 1.0019533875336855 0.9604925222150799 1.1275456971200795 1.1352439667175878 1.0271497336189823 1.0076685646958086 0.9525451124190671 1.0212247693468444 1.003234626359473 0.9928351230474293 1.0 12.226295326329268 -6.997702572911518 24.994002949464964 1.0002225333163541 1.057883662490508 0.24642342191427768 0.048882061611068235 88.44473673342583 962176.5574206514 0.0072476198342770306 0.013635874655392514 1.0053040382348193e-07 6.997702572911518 0.05766112917415378 S(ph)FSSQRPVVDR ddPTM_A549_PD325901_60min_R1 1 SFSSQRPVVDR 11 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(0.558)FS(0.43)S(0.012)QRPVVDR 80.74600000000001 0.00023619 16577000.0 2774.7 2929.3 2261.8 2541.9 3385.5 2902.5 2913.6 3237.6 2461.5 2719.1 3090.4 True False 3056.3855013738194 3176.1623913792428 2415.2993493082986 2698.907389926246 3147.7141593409533 2878.8630023208098 3024.478642383096 3173.023528151933 2358.05171509683 2547.41556195549 2710.3003916596845 1.127692528392473 1.1718857441607358 0.8911555917347086 0.9957964062697635 1.1613894050369131 1.0621933314771446 1.1159200846113668 1.1707276204202939 0.870033344773584 0.93990155843779 1.0 11.404237043820844 -8.766083958822664 24.999987320212487 0.9386268577635208 1.0829540903237178 0.386542356836413 0.08428358869589499 97.24904280566501 523452.8423145702 0.015954263610265692 0.017260579722669863 1.713625993308482e-09 8.766083958822664 0.14432723256019697 S(ph)FTEAAIR ddPTM_A549_MK2206_60min_R1 1 SFTEAAIR 8 0 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 S(0.986)FT(0.014)EAAIR 46.158 0.042551 1238100.0 303.52 489.39 610.03 407.07 650.29 374.38 470.58 307.37 608.26 545.16 751.2 True False 354.7467556484573 514.2978606463022 696.5414269523636 506.8021682740668 554.6332024339541 413.9966431066688 556.0782947138167 350.9406387811463 470.4900811916255 422.0079773699363 564.6563079347118 0.6282525328477775 0.9108157536172743 1.2335670693205132 0.8975409663406534 0.9822491923672682 0.7331834202311559 0.9848084346170327 0.6215119424854166 0.8332326666330729 0.7473714035241609 1.0 9.141229192327158 -5.262326502392106 8.782453718293823 0.9147670123224579 0.6268356550971984 0.18125220421288546 0.15733605902723916 0.09222419105028092 130.824177628186 0.020333096889755257 0.16172721943091964 5.46604871092884e-06 5.262326502392106 -0.28793135722525953 S(ph)FTLDDESLK ddPTM_A549_MK2206_60min_R1 2 SFTLDDESLK 10 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(1)FTLDDESLK;S(0.811)FT(0.189)LDDESLK 190.15 2.0666e-14 33196000.0 7181.7 7590.6 6429.0 6138.200000000001 10546.0 8278.7 7015.1 8352.7 10900.599999999999 9085.3 10010.4 True False 8393.795384292718 7976.92911792603 7340.728872148493 7642.059275554268 8994.697370201724 9154.746539043694 8289.6528650748 9536.720804070934 8431.631504681272 7032.92441998511 7524.541407014958 1.1155225189494438 1.0601216321953284 0.9755715963374059 1.0156179442948843 1.195381470266902 1.2166517590705173 1.1016821380431965 1.2674155524189243 1.1205508812564517 0.9346648572401336 1.0 12.877387942283764 -4.6842427421916755 5.78825992501356 1.085048288177561 3.166483945329874 0.004560992825474619 0.10070872995630825 14986.570531053403 4628.953486988962 0.01380999830590152 402755.97712209105 2.068984598567643e-05 4.6842427421916755 2.081435657152313 S(ph)FTLDDESLK ddPTM_A549_PD325901_60min_R1 3 SFTLDDESLK 10 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.998)FT(0.002)LDDESLK;S(0.988)FT(0.012)LDDESLK;S(0.947)FT(0.053)LDDESLK 189.13 2.5710000000000002e-14 34063000.0 9526.7 10758.9 11126.2 10393.5 13881.5 12098.8 11461.9 12989.900000000001 12695.7 15450.599999999999 15940.0 True False 10493.843570814139 11665.590261362833 11881.290839275798 11035.48288964887 12906.511328575234 12000.271384144351 11898.088876692345 12730.806254120589 12162.143879486008 14475.0464791841 13979.481051985293 0.7506604524009751 0.8344794930500047 0.8499092917035342 0.7894057618170075 0.9232468129954166 0.8584203762299271 0.8511109126617143 0.9106780292328968 0.8699996683896076 1.0354494866694948 1.0 13.771023185354109 -14.999999999999744 0.09553582067676579 1.494453852875909 0.7327410366011058 0.7708258282489766 0.03837537893632534 41.95580029652008 0.29021573382793453 4.194804823917096 0.28675369598106865 1.000000000000589e-15 14.999999999999744 -0.7617128162748033 S(ph)FTPDHVVYAR ddPTM_A549_MK2206_60min_R1 2 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.991)FT(0.009)PDHVVYAR;S(0.833)FT(0.167)PDHVVYAR 220.29 6.222699999999999e-32 52619000.0 6224.299999999999 13157.800000000001 9398.8 7475.8 11987.5 9329.3 6881.1 8442.9 12258.099999999999 13005.0 11868.5 True False 7274.809670475401 13827.475818492238 10731.691168696418 9307.371335601414 10224.154629745233 10316.52033371186 8131.30679959889 9639.706930296841 9481.65992216332 10067.161467635236 8921.223896063802 0.8154497359588937 1.54995278445967 1.202939338113846 1.043284132764338 1.1460484288771529 1.156401907844022 0.9114564205911885 1.0805363751211363 1.0628205314235855 1.1284507131445318 1.0 13.12302593064378 -7.022162850863708 1.030213954734864 1.0287794661802883 1.203017641357676 0.06689420206239238 0.17246941999337148 0.7064216686037232 1.4647687081732816 0.02563402748816724 0.0676472405129316 9.502484046225798e-08 7.022162850863708 0.17423817517738782 S(ph)FTPDHVVYAR ddPTM_A549_PD325901_60min_R1 4 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.99)FT(0.01)PDHVVYAR;S(0.652)FT(0.348)PDHVVYAR;S(0.992)FT(0.008)PDHVVYAR;S(0.599)FT(0.401)PDHVVYAR 240.05 5.2613e-50 217824000.0 23041.5 29346.899999999998 24190.0 23725.0 18554.5 30702.8 27659.7 30493.4 24573.500000000004 29075.5 29562.5 True False 25380.656117744205 31820.0662559545 25831.678866286922 25190.439366615596 17251.295929550062 30452.766576280894 28712.305019468604 29885.18521539046 23540.761251648153 27239.667967944137 25926.499912127703 0.9789464911872594 1.2273182405570275 0.996342697774009 0.9716097217901828 0.6653923972776742 1.1745807062077025 1.1074501038236086 1.1526887669635264 0.9079806889257903 1.0506496465109882 1.0 14.662139834477758 S(ph)FVPEEEKHEER ddPTM_A549_MK2206_60min_R1 2 SFVPEEEKHEER 12 1 A0A0U1RRH6;O94880;B4DG57;O94880-2 A0A0U1RRH6 PHF14 PHD finger protein 14 1 S(1)FVPEEEKHEER;S(1)FVPEEEKHEER 118.51 8.1976e-06 26509000.0 3513.1000000000004 2820.2 2256.93 2478.1000000000004 3775.6000000000004 2707.7 1765.96 2431.1 3508.3 2955.6 3071.2 True False 4106.025392951356 2963.7361339518593 2576.996611202067 3085.234611246135 3220.2142415070753 2994.2270167742054 2086.812073043504 2775.715869931498 2713.675651603883 2287.9279072466525 2308.536279192075 1.7786271889945575 1.2838161395449614 1.1162902807418498 1.3364462317767356 1.3949160212609102 1.2970240250337775 0.9039546364737362 1.2023704781901556 1.1754962120645536 0.9910729702923988 1.0 11.172762689520333 -2.0000000000000004 0.28160241789795526 1.0649564469433404 5.098478050419235 0.5647937461356635 0.15143602292561092 27.529811784461135 0.3425747227505117 0.05701956163622404 55.67656115224248 0.00999999999999999 2.0000000000000004 4.0335216034758945 S(ph)FVPEEEKHEER ddPTM_A549_PD325901_60min_R1 1 SFVPEEEKHEER 12 1 A0A0U1RRH6;O94880;B4DG57;O94880-2 A0A0U1RRH6 PHF14 PHD finger protein 14 1 S(1)FVPEEEKHEER 82.57799999999999 0.00026892 8089100.0 1559.5 1088.7 991.72 1166.8 1560.9 904.94 1072.6 1517.8 1555.3 1885.6 2149.8 True False 1717.8192919567778 1180.4485697929817 1059.0240828968194 1238.8705860049351 1451.2677688126707 897.5704686719006 1113.4183799492407 1487.5262883089342 1489.9361497014418 1766.5428942014896 1885.3882287050183 0.9111223173047307 0.6261037126575117 0.5617008034595674 0.6570904427762633 0.7697447914000588 0.4760666556661374 0.5905512525205452 0.7889761194333137 0.7902542972408428 0.9369650596656384 1.0 10.880645910520805 -9.507231207167619 0.6689239967754789 0.977007259241397 0.6535780154833624 0.5011871225893914 0.1136888069899467 0.3444245054115363 0.33700497244667615 0.04599568453587844 0.027508277859136527 3.1100601805668763e-10 9.507231207167619 -0.3234292437580346 S(ph)GAGVAAGT(ph)RPPSSPTPGSR ddPTM_A549_MK2206_60min_R1 1 SGAGVAAGTRPPSSPTPGSR 20 1 F8WCQ0;F8WB40;F8WEI8;C9JC78;B8ZZB0;E9PG54;F5GZA4;E7ESC5;Q96AQ1-2;Q96LY2-2;Q96AQ1;Q96LY2 F8WCQ0 CCDC74B;CCDC74A Coiled-coil domain-containing protein 74A;Coiled-coil domain-containing protein 74B 2 S(0.871)GAGVAAGT(0.904)RPPS(0.114)S(0.11)PTPGSR 45.70399999999999 0.059162 20562000.0 3197.0 4268.7 4069.0 3248.9 4650.5 3745.5 3788.4 4070.3 5097.4 5111.9 5763.2 True False 3736.5754408543694 4485.958596908129 4646.04538509445 4044.880645848664 3966.4176104800963 4141.84632393832 4476.7032421561125 4647.2774897709605 3942.8470388751343 3957.1182396312593 4332.038383771738 0.8625443982333965 1.0355306669749262 1.072484815115908 0.9337130208728536 0.915600753986554 0.956096404744266 1.0333941774214892 1.0727692319579025 0.9101597653532908 0.9134541038359751 1.0 12.080830310579659 S(ph)GAKEEAGPGGAGGGGSR ddPTM_A549_MK2206_60min_R1 1 SGAKEEAGPGGAGGGGSR 18 1 Q12872-2;Q12872;F5H1A5 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 S(1)GAKEEAGPGGAGGGGSR 56.93600000000001 0.0021907 7289200.0 1075.7 1322.4 1232.9 1234.4 1500.0 1016.4 1245.3 1101.3 1679.9 1705.8 1702.5 True False 1257.2518616600075 1389.704511572918 1407.7437589783592 1536.8280554143216 1279.3519870379846 1123.9547733682843 1471.5548905757073 1257.4126475897995 1299.405332249056 1320.4585952704488 1279.7222633903712 0.9824411887069677 1.0859422792967361 1.1000384999545296 1.200907493273423 0.9997106588179488 0.8782802374560464 1.1499017659324873 0.9825668299764773 1.015380734884254 1.031832166279701 1.0 10.321615022460179 S(ph)GAKEEAGPGGAGGGGSR ddPTM_A549_PD325901_60min_R1 2 SGAKEEAGPGGAGGGGSR 18 1 Q12872-2;Q12872;F5H1A5 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 S(1)GAKEEAGPGGAGGGGSR;S(1)GAKEEAGPGGAGGGGSR 62.677 0.00078685 19148700.0 3570.5 4105.8 3149.2 3944.2 4509.0 3756.3 3514.7 4598.4 4499.3 4340.3 4426.0 True False 3932.974531536825 4451.810175306351 3362.923649677994 4187.824276071879 4192.303395205539 3725.7099381972953 3648.4538318176383 4506.681304624986 4310.210067737216 4066.2527172797672 3881.630058725652 1.0132275544125473 1.146891926318164 0.8663689220250035 1.0788828952563168 1.0800368226182488 0.9598312775381934 0.9399282715301917 1.161028031121683 1.110412378956141 1.0475631772634013 1.0 11.922446912277286 -8.241411048006576 24.89605125859915 1.0617626824148476 1.0149044271704695 0.1238645856744478 0.08130354026394811 1813.8904252494342 2254743.0099140704 0.013561910801837626 0.01749683639064318 5.7357333353870565e-09 8.241411048006576 -0.046858255244378144 S(ph)GALEPPTSAPPTLALVPGGAAAR ddPTM_A549_MK2206_60min_R1 2 SGALEPPTSAPPTLALVPGGAAAR 24 0 Q9P244 Q9P244 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 1 S(0.996)GALEPPT(0.002)S(0.002)APPTLALVPGGAAAR;S(0.982)GALEPPT(0.008)S(0.008)APPT(0.002)LALVPGGAAAR 50.883 0.008092199999999999 3036300.0 675.76 1218.1999999999998 1093.81 929.59 1266.77 669.96 1016.45 1066.93 1152.68 1146.06 1586.74 True False 789.811767254222 1280.2011766471014 1248.9287054977046 1157.3395917308803 1080.4298110800714 740.8547225165446 1201.1258078580881 1218.1705948360889 891.5998204517189 887.1642500267617 1192.7086662038394 0.6622000741958552 1.0733561454883478 1.0471364390038371 0.9703455877573759 0.905862296212595 0.6211531311116751 1.007057164832246 1.0213479866070647 0.7475419989103529 0.7438230937404301 1.0 10.220025974676599 -6.98598588138487 17.993207457335348 0.8791972614400189 0.9534897821025411 0.04465861866571985 0.15423293643122674 25.161949382566515 32296.70850812636 0.022695111141456087 0.04282223010152143 1.0327949806706599e-07 6.98598588138487 0.07429252066252223 S(ph)GALEPPTSAPPTLALVPGGAAAR ddPTM_A549_PD325901_60min_R1 1 SGALEPPTSAPPTLALVPGGAAAR 24 0 Q9P244 Q9P244 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 1 S(0.999)GALEPPTSAPPTLALVPGGAAAR 64.723 0.00031468 2776800.0 769.87 725.36 979.75 592.37 1050.0 701.3 738.2 1028.1 807.1 833.92 809.99 True False 848.0266356516605 786.4886328511411 1046.2417267153612 628.9593495301198 976.251622303353 695.5888453152743 766.2926049585396 1007.5937389711528 773.1803937658542 781.2661488823221 710.3663649496592 1.1937877094050713 1.1071591669558798 1.472819911440351 0.885401365497776 1.374293140093332 0.9791973263888527 1.0787287275529207 1.4184141996117128 1.0884248352899513 1.0998073493213425 1.0 9.472419463088428 -8.98293070603874 17.068944239833243 1.0390035132951878 1.1854318544431346 0.0971762438411018 0.17265114975254076 4.789198435742182 4790.1058220027335 0.028004830269849252 0.02853301852745305 1.0400861037808028e-09 8.98293070603874 0.14642834114794678 S(ph)GAMVK ddPTM_A549_PD325901_60min_R1 1 SGAMVK 6 0 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 S(1)GAMVK 40.098 0.044121 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)GAQASSTPLSPTR ddPTM_A549_MK2206_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(1)GAQASSTPLSPTR;S(1)GAQASSTPLSPTR 193.32 4.7957e-27 53850000.0 8285.7 9765.7 8724.9 7905.8 11168.0 8571.3 8502.1 8965.2 12602.599999999999 12633.7 12268.9 True False 9684.123594084158 10262.73241732277 9962.222015338057 9842.721354904843 9525.201994160147 9478.30927683154 10046.821517035029 10236.044554773509 9748.131222216773 9779.738395514289 9222.193525585979 1.0500889584692192 1.1128298694719352 1.0802443028005158 1.067286359540957 1.032856442204721 1.0277716739011165 1.089417771288491 1.1099359958533412 1.0570295662492482 1.0604568607654417 1.0 13.170894225349436 -10.160064917046792 0.777048914488028 1.0022592661752405 1.0706005902728963 0.09310936923688673 0.03148614683742402 0.41686747766697574 0.49134781970315633 0.014938994461169098 0.005777574772902048 6.917275658126728e-11 10.160064917046792 0.06834132409765581 S(ph)GAQASSTPLSPTR ddPTM_A549_PD325901_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(1)GAQASSTPLSPTR;S(0.999)GAQASS(0.001)TPLSPTR 135.8 4.562e-09 57781000.0 23381.0 22691.0 24461.0 23886.0 27388.0 25769.0 25172.0 25252.0 25247.0 27993.0 29814.0 True False 25754.621907817513 24603.250204071435 26121.07055594229 25361.38397095806 25464.361363470693 25559.145807684734 26129.93423464693 24748.32905018924 24185.956388807495 26225.517202684718 26147.06700651754 0.9849908558155985 0.9409564062362602 0.9990057603566483 0.9699513893713725 0.9738897811033003 0.9775148318285084 0.9993447535868425 0.9465049767922481 0.924996917733786 1.0030003440212862 1.0 14.67436150374754 -8.27914259375679 24.528366392882774 0.962236487726756 0.9768569068449752 0.006920242563007939 0.02545985490659958 1689.1381969808608 2340349.84207708 0.0049898415827232005 0.006041252810016296 5.258445852515806e-09 8.27914259375679 0.014620419118219208 S(ph)GASEANLIVAK ddPTM_A549_MK2206_60min_R1 2 SGASEANLIVAK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.999)GAS(0.001)EANLIVAK;S(0.999)GAS(0.001)EANLIVAK 206.67 1.8761000000000002e-25 41290000.0 9648.6 13662.8 12243.7 11843.900000000001 16557.699999999997 14117.599999999999 13088.3 15487.9 17906.7 17815.0 16874.1 True False 11277.04779437831 14358.178161462838 13980.040767137105 14745.656031692875 14122.08426385255 15611.515061495562 15466.274692300678 17683.35725470448 13850.86104112399 13790.57912694516 12683.795268531832 0.8890909665150756 1.1320096120665954 1.1021969742622086 1.1625586600468447 1.1133957908394403 1.2308236400052377 1.2193727795868878 1.3941692435367852 1.092012347084127 1.0872596754347834 1.0 13.630698875486242 -9.340820298830067 2.2573984744601527 1.0299411665734661 1.1581569601106212 0.1068686576638499 0.1168808420723146 0.3380256958976865 3.5122888601029616 0.024453662421592623 0.021727516681945464 4.5622565269026344e-10 9.340820298830067 0.12821579353715506 S(ph)GASEANLIVAK ddPTM_A549_PD325901_60min_R1 2 SGASEANLIVAK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)GASEANLIVAK;S(1)GASEANLIVAK 198.74 1.5369999999999999e-24 75049000.0 11245.099999999999 11033.599999999999 11804.8 12976.6 13668.4 12886.3 14496.3 13339.099999999999 13874.6 14028.4 13138.900000000001 True False 12386.69427379491 11963.440194422565 12605.944716029087 13778.135110003119 12708.378737420147 12781.358245239146 15047.964629179733 13073.041186178492 13291.4988122212 13142.644429898279 11522.898594349415 1.0749634019923668 1.038231838670279 1.0939907708821437 1.1957178132904531 1.1028803762667898 1.1092138094061552 1.3059183421573226 1.1345271399497723 1.1534857053015348 1.1405675683324292 1.0 13.492216053073019 -10.684452454816356 0.9586066330246792 1.0004519010676893 1.135626044603436 0.0 0.07839686658832973 0.512261632773567 0.8412959544223039 0.04679221827458694 0.012487379065694935 2.067985766055739e-11 10.684452454816356 0.13517414353574675 S(ph)GDEEFKGEDELCDSGR ddPTM_A549_MK2206_60min_R1 2 SGDEEFKGEDELCDSGR 17 1 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 S(1)GDEEFKGEDELCDSGR;S(1)GDEEFKGEDELCDSGR 160.77 6.8414e-23 27548000.0 3189.7 3567.7 3265.2 2257.08 5810.0 4368.4 4258.7 4870.2 6242.6 3779.1 4258.1 True False 3728.0433793222314 3749.2806911212137 3728.2544584444336 2810.064701324172 4955.35669646046 4830.661188490763 5032.450664494309 5560.56576436197 4828.661067383749 2925.398685301063 3200.696252418525 1.164760128832978 1.1713953450872336 1.164826076709801 0.8779541948726992 1.5482121093859094 1.5092532397726266 1.5722987336557368 1.7372988018342161 1.5086283378921361 0.9139882246216146 1.0 11.644170055602991 -6.765275249011903 24.99973326785922 1.3476028643727673 1.105216346125439 0.24500231168640763 0.24617647693278777 152.30930733098447 992664.1202648229 0.040907017358212214 0.07943740036535923 1.716819948795632e-07 6.765275249011903 -0.24238651824732838 S(ph)GDEEFKGEDELCDSGR ddPTM_A549_PD325901_60min_R1 2 SGDEEFKGEDELCDSGR 17 1 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 S(1)GDEEFKGEDELCDSGR;S(1)GDEEFKGEDELCDSGR 96.54 6.328e-07 29957000.0 2806.8 2962.0 3177.6 2897.8 3489.7 2130.81 2495.38 3246.6 2450.64 3370.7 3083.1000000000004 True False 3091.7442697430474 3211.618135139903 3393.2510444610707 3076.7905246187015 3244.59551081144 2113.457389827803 2590.343051424331 3181.844016091569 2347.6481231301627 3157.8734267527407 2703.8982453811705 1.1434395784029225 1.1877732975440276 1.2549477593165572 1.1379091391011145 1.1999695315287455 0.7816334780489743 0.9580031555733224 1.1767617444653589 0.8682457363698659 1.1678965479366894 1.0 11.400825144992915 -7.234530278175394 24.57799321483008 0.9481746502143599 1.1862638237424248 0.3797605817815597 0.11541094515163532 333.3615960632423 304482.8827664967 0.014473458446635074 0.025063972919596014 5.827331463467362e-08 7.234530278175394 0.2380891735280649 S(ph)GDEMIFDPTMSK ddPTM_A549_MK2206_60min_R1 5 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSK;S(0.999)GDEMIFDPT(0.001)MSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK 150.22 8.0534e-13 27146200.0 8894.5 11496.9 10691.0 8476.300000000001 13027.800000000001 11175.4 8483.0 9919.699999999999 15897.499999999998 13749.7 14078.1 True False 10395.674150353207 12082.043102769709 12207.144559362192 10552.993880515562 11111.427877822312 12357.973410369861 10024.251294269427 11325.847852807163 12296.741633090887 10643.633220418626 10582.11923420616 0.9823811204800755 1.1417413502311635 1.1535633164955486 0.9972476823360247 1.0500191532434437 1.1678164965693585 0.9472820209648126 1.0702816328318185 1.1620301530285444 1.005813012011207 1.0 13.369340958089518 -11.192805384194807 1.6279143194129306 1.0000936846942896 1.0882159577913186 0.10152793892223533 0.07389340684647516 0.5853927329938121 2.794803308785959 0.05432114387462254 0.011432945487861444 6.414969794597722e-12 11.192805384194807 0.08812227309702902 S(ph)GDEMIFDPTMSK ddPTM_A549_PD325901_60min_R1 7 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSK;S(0.996)GDEMIFDPT(0.003)MSK;S(0.979)GDEMIFDPT(0.016)MS(0.006)K;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK 138.77 7.581499999999999e-09 46305900.0 19505.4 19823.4 17769.499999999996 21745.999999999996 23079.600000000002 22976.9 20604.0 22812.4 22731.6 23913.899999999998 25338.2 True False 21485.573848883454 21493.98748822835 18975.44512668396 23089.201031250712 21458.56851629759 22789.783744366927 21388.096494941423 22357.388786018415 21776.269903268367 22403.972272828283 22221.762032083672 0.9668708456990354 0.9672494673102626 0.8539127140002357 1.039035563332675 0.9656555805662851 1.025561506394639 0.9624842739320758 1.0061033303182225 0.9799524390472679 1.0081996306360197 1.0 14.439685596553765 -6.283058421137149 24.999136173523365 0.9927762369245434 0.933134828490398 0.41779992022350076 0.03577471741597988 562.3355614359526 650254.4882481935 0.004483034900586219 0.010426142504413387 5.211246048958625e-07 6.283058421137149 -0.05964140843414545 S(ph)GDETPGSEVPGDK ddPTM_A549_MK2206_60min_R1 2 SGDETPGSEVPGDK 14 0 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.998)GDET(0.002)PGSEVPGDK;S(0.955)GDET(0.045)PGSEVPGDK 275.66 4.881100000000001e-99 40162000.0 4674.3 4761.6 4331.4 4375.4 8476.3 5776.1 5501.1 6450.4 8191.799999999999 5668.2 5733.8 True False 5463.207564337055 5003.945101562011 4945.65765077368 5447.37319641917 7229.44749848671 6387.32306813513 6500.578662608227 7364.763953521516 6336.370379616537 4387.749683264133 4309.939215170459 1.2675834371647825 1.161024518385024 1.147500557169245 1.2639095180844042 1.6773896655061722 1.4819984109410484 1.5082761816517007 1.708786037538174 1.470176274717121 1.0180537274910493 1.0 12.073451807203716 -10.67962534907388 1.0266501977704312 1.0082795557649329 1.4112837203045698 0.4222125938993705 0.17966170958987313 0.44192553049880656 0.8535996181558957 0.12279271523391827 0.035213498064665213 2.0910992724751464e-11 10.67962534907388 0.40300416453963694 S(ph)GDETPGSEVPGDK ddPTM_A549_PD325901_60min_R1 2 SGDETPGSEVPGDK 14 0 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.999)GDET(0.001)PGSEVPGDK;S(0.999)GDET(0.001)PGSEVPGDK 260.73 1.1845e-70 36090000.0 6645.5 6231.5 6137.8 5535.1 7631.3 5406.2 5785.9 5665.1 5511.200000000001 6530.1 6581.5 True False 7320.146267841466 6756.650374451153 6554.348017589739 5876.990555875832 7095.303814555786 5362.1736996199 6006.085590665961 5552.105136315022 5279.583429714257 6117.788371566163 5772.017223565952 1.2682128247911015 1.1705873549484827 1.1355385411584866 1.0181865937407975 1.2292589470431807 0.9289947503495405 1.040552264145082 0.961900306472913 0.9146860144766739 1.0599047325410775 1.0 12.49485988946627 -6.198151426095925 0.5037226704225185 0.9576197497573868 1.3003191493972537 0.550933813146063 0.07644523421178247 0.9158606008994598 0.26787440314792865 0.014763868728297798 0.15590715629504476 6.336487374980362e-07 6.198151426095925 0.34269939963986684 S(ph)GDETPGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_MK2206_60min_R1 1 SGDETPGSEVPGDKAAEEQGDDQDSEK 27 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(1)GDETPGSEVPGDKAAEEQGDDQDSEK 345.43 6.0838999999999964e-257 21408000.0 2548.1 2383.6 2460.7 2354.2 4385.1 3793.4 2076.7 3229.4 5783.6 3297.5 2923.0 True False 2978.1569849361963 2504.9150588212397 2809.6642612685923 2930.979105684055 3740.0575989068434 4194.815070144872 2454.0095087597924 3687.177339622716 4473.623834511368 2552.5924597867893 2197.1384293039973 1.3554708002078901 1.140080672848064 1.2787834502346895 1.333998380162383 1.7022403090421605 1.909217468593316 1.1169116501854486 1.6781725222432746 2.0361137809275442 1.1617804439365214 1.0 11.101410053366799 -6.576032967660586 7.254441511393417 1.530251254537591 1.2558435243282469 0.12120047430553116 0.31081926247228847 0.4316790258253257 48.521134836710296 0.05769418440660244 0.1208990427975335 2.6544040562756614e-07 6.576032967660586 -0.27440773020934417 S(ph)GDETPGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_PD325901_60min_R1 1 SGDETPGSEVPGDKAAEEQGDDQDSEK 27 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.962)GDET(0.038)PGSEVPGDKAAEEQGDDQDSEK 274.69 4.314999999999999e-140 18321000.0 2314.2 2593.9 2414.9 2252.1 2792.7 2226.1 2642.0 2747.2 2583.5 3505.3 2993.3 True False 2549.1358803760036 2812.497056292843 2578.789635973388 2391.2071021098 2596.550386291976 2207.9713796611027 2742.542755757875 2692.4049408632904 2474.9244793632583 3283.974759781761 2625.1430760920694 0.9710464559405219 1.0713690548553563 0.9823425090461411 0.9108863908741617 0.9891081404055667 0.8410861106084964 1.0447212499520495 1.0256221709909048 0.9427769868633467 1.2509698193937926 1.0 11.35818033964784 -5.980681414620356 24.72119808085652 0.9689314557785549 1.0226198030113651 0.0 0.10238516381105604 326.47407228668334 417769.2400186436 0.007541253531538436 0.023441380234547355 1.0454868757393235e-06 5.980681414620356 0.05368834723281024 S(ph)GDVLAK ddPTM_A549_PD325901_60min_R1 1 SGDVLAK 7 0 P85299-2;P85299-4;P85299-3;P85299;P85299-5;B1AHG4 P85299-2 PRR5 Proline-rich protein 5 1 S(1)GDVLAK 67.89699999999999 0.021632 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)GEGEVSGLMR ddPTM_A549_MK2206_60min_R1 3 SGEGEVSGLMR 11 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 S(0.95)GEGEVS(0.05)GLMR;S(1)GEGEVSGLMR;S(1)GEGEVSGLMR 97.195 9.9282e-05 52820500.0 5587.45 6083.65 5089.2 4514.07 7819.29 6258.25 5359.48 5591.68 7643.370000000001 7191.96 7419.13 True False 6530.4749599630095 6393.281799629901 5810.925085726881 5620.0173526443 6669.0827991508295 6920.493861109865 6333.2281417672 6384.31776380181 5912.158898953793 5567.291240966852 5576.755263428722 1.171016953673509 1.1464160605282074 1.0419903351028865 1.0077575735659914 1.195871521005302 1.2409534817662018 1.1356474943950436 1.1448086678052605 1.0601431512916808 0.9983029518035453 1.0 12.44521024418554 -9.080975758495661 1.5410960240100429 1.0192629904660864 1.1343252114853932 0.4077393690160812 0.06276756614535343 0.284683791885769 1.3831483243991858 0.014352817438342642 0.013632213810506479 8.298970895223497e-10 9.080975758495661 0.11506222101930685 S(ph)GEGEVSGLMR ddPTM_A549_PD325901_60min_R1 5 SGEGEVSGLMR 11 0 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 S(1)GEGEVSGLMR;S(0.997)GEGEVS(0.003)GLMR;S(1)GEGEVSGLMR;S(0.999)GEGEVS(0.001)GLMR;S(1)GEGEVSGLMR 107.52 4.870100000000001e-05 49568900.0 7708.94 8846.130000000001 8509.91 8851.44 10425.55 9895.349999999999 9092.55 9826.72 9313.24 10964.970000000001 10389.220000000001 True False 8491.545913778318 9591.624420595941 9087.443666845953 9398.173345721223 9693.295334194972 9814.765550392838 9438.571965884268 9630.71836068729 8921.836910464512 10272.639922906512 9111.411802691762 0.931968184257645 1.052704523547307 0.9973694377594997 1.0314727892053726 1.0638631579939462 1.0771948149125787 1.0359066377721895 1.0569951802466122 0.9791936862988406 1.1274476607315336 1.0 13.153458899933542 -8.771922306951746 24.999369894367508 0.9901747942149713 1.0333645187116898 0.0 0.05594767985891428 229.7865793981797 547986.5652738966 0.006335960003819124 0.00678092486662308 1.6907433698796916e-09 8.771922306951746 0.04318972449671843 S(ph)GENQIMMTK ddPTM_A549_MK2206_60min_R1 1 SGENQIMMTK 10 0 O94886 O94886 TMEM63A CSC1-like protein 1 1 S(1)GENQIMMTK 40.727 0.027238 4400100.0 1032.5 1361.2 686.39 1160.7 839.96 908.89 852.11 1026.7 1114.4 1129.5 883.52 True False 1206.7607577986037 1430.4792658447175 783.7304231690779 1445.0715521058034 716.4029966882839 1005.0681365276465 1006.9273571095046 1172.2378691368804 861.9901793311197 874.3451655281812 664.1176000884939 1.8170889577957314 2.1539547599011164 1.1801078951448443 2.175927203123735 1.0787291235661018 1.5133887979986087 1.5161883331737198 1.7651058622459024 1.297948103191753 1.3165517152559643 1.0 9.37529492237409 -3.590660737797101 0.058821827241045316 2.1422398443672555e-11 4.131542632190921 0.2701903985234837 0.3309710151766694 133.32999214021913 0.7696261203985346 13.58313868388873 51.58305950961179 0.0002566488143072917 3.590660737797101 4.1315426321694995 S(ph)GEQIFTQDVRPEQLLEGK ddPTM_A549_PD325901_60min_R1 2 SGEQIFTQDVRPEQLLEGK 19 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(1)GEQIFTQDVRPEQLLEGK;S(0.993)GEQIFT(0.007)QDVRPEQLLEGK 107.08 3.5433e-10 9971600.0 3183.6 3214.2 3019.6 3222.1 3863.8 3027.0 3646.2 3364.4 3476.0 2737.1000000000004 3365.4 True False 3506.7967283575517 3485.071914235879 3224.528214329887 3421.1217990799632 3592.420017386375 3002.349115598652 3784.9581362771987 3297.2944026792575 3329.915808115612 2564.279038883593 2951.477135028315 1.1881497189114796 1.180789060797669 1.092513364261232 1.1591219049193626 1.2171600364953907 1.0172361086476278 1.2823945309814802 1.1171675238634788 1.1282200931174304 0.8688120969837676 1.0 11.527221449991854 -10.317420018016145 0.5309168503565594 0.9853073203379334 1.1594436739859244 0.5166581469892991 0.07677423662187349 0.7391546051384152 0.35043773635370057 0.06148978416616335 0.014828691443615486 4.814819181087866e-11 10.317420018016145 0.17413635364799096 S(ph)GEQITSSPVSPK ddPTM_A549_MK2206_60min_R1 2 SGEQITSSPVSPK 13 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.971)GEQIT(0.018)S(0.01)S(0.001)PVSPK;S(1)GEQITSSPVSPK 164.65 5.7284e-19 12625300.0 11404.3 11289.2 9706.5 7912.0 13142.900000000001 9020.2 7513.0 8673.2 11333.599999999999 12390.3 13870.3 True False 13329.067031634486 11863.772059928138 11083.027655546643 9850.440355183171 11209.596820294359 9974.711576875838 8878.014850152807 9902.652660561023 8766.557696040181 9591.322624562921 10425.921709194394 1.278454548520144 1.137911101851622 1.0630261730982271 0.9448028318202584 1.0751660268471859 0.956722278863782 0.8515328522296 0.9498107636687977 0.8408424636748562 0.919949611371486 1.0 13.347887311085454 -4.806268352790668 0.576488366860517 0.9231124294690279 1.7279741623607874 0.7858905568418395 0.05707669371085478 2.1913789837926454 0.3401200862448991 0.012396366691324623 1.323234706933307 1.562182064033803e-05 4.806268352790668 0.8048617328917594 S(ph)GEVTLTK ddPTM_A549_PD325901_60min_R1 2 SGEVTLTK 8 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 S(1)GEVTLTK;S(0.998)GEVT(0.001)LT(0.001)K 132.78 0.0010762 20296300.0 6383.6 6315.6 6632.200000000001 7402.6 7697.9 7529.6 6787.799999999999 7638.1 7253.6 8152.299999999999 7901.6 True False 7031.658372642054 6847.837776600131 7082.300974658454 7859.841789475607 7157.226060313311 7468.281434030921 7046.113443426684 7485.752103526468 6948.756417073479 7637.562386719774 6929.753292369326 1.014705441301199 0.9881791584327546 1.0220134362441309 1.1342166824510829 1.0328255218254978 1.0777124551107171 1.0167913843607517 1.080233564991322 1.0027422512609616 1.1021405906513078 1.0 12.758588276243781 -8.8547883931847 10.765860107371472 1.0012274367658576 1.0457129838248151 0.0 0.048682893742866516 0.4270432435721394 46.16620352471857 0.006587827851865575 0.007008728414522075 1.39704889712391e-09 8.8547883931847 0.044485547058957575 S(ph)GGDGGDEVEGSGVGAGEGETVQHFPLAR ddPTM_A549_MK2206_60min_R1 2 SGGDGGDEVEGSGVGAGEGETVQHFPLAR 29 0 Q96DT7-3;Q96DT7-2;Q96DT7 Q96DT7-3 ZBTB10 Zinc finger and BTB domain-containing protein 10 1 S(1)GGDGGDEVEGSGVGAGEGETVQHFPLAR;S(1)GGDGGDEVEGSGVGAGEGETVQHFPLAR 153.69 1.3645e-37 10852900.0 1997.6299999999999 2032.5099999999998 2111.97 1846.24 2675.5 2390.8 2189.4 1937.4699999999998 2970.1 2972.2 2823.1 True False 2334.781106635568 2135.956077447876 2411.479103454884 2298.5688828808643 2281.9374942134195 2643.792869115401 2587.185639947364 2212.112305753027 2297.377092275089 2300.7779557174513 2122.0463564037336 1.100249812917546 1.0065548620095723 1.1363932254249416 1.0831850472749738 1.0753476177969346 1.2458695170052174 1.2191937429359034 1.0424429697671307 1.0826234240087438 1.084226057915444 1.0 11.051240457136863 -9.79247430239844 0.7856267278390748 1.0094313504274008 1.114543103775698 0.10758152156848388 0.06991069127510337 0.5789752219118257 0.7466034293517205 0.028237044697163254 0.01495589134882527 1.6125964433206974e-10 9.79247430239844 0.10511175334829725 S(ph)GGDGGDEVEGSGVGAGEGETVQHFPLAR ddPTM_A549_PD325901_60min_R1 1 SGGDGGDEVEGSGVGAGEGETVQHFPLAR 29 0 Q96DT7-3;Q96DT7-2;Q96DT7 Q96DT7-3 ZBTB10 Zinc finger and BTB domain-containing protein 10 1 S(0.998)GGDGGDEVEGS(0.002)GVGAGEGETVQHFPLAR 126.68 2.5197e-22 8844300.0 1748.8 1832.3 1648.2 2152.2 2405.3 2059.7 1943.6 1859.4 1963.7 2281.6 1799.7 True False 1926.336888601483 1986.7143514574082 1760.0567634317524 2285.136505999162 2236.3600258345286 2042.9264860913588 2017.5647615787302 1822.3128083289193 1881.1725179506982 2137.5393866197073 1578.348309238265 1.2204764165972735 1.2587299899704818 1.1151257001575163 1.4478024227123885 1.4168989270269692 1.2943445208727764 1.2782759988841992 1.154569493731327 1.1918614585513008 1.3542887676366673 1.0 10.624199898480173 -9.682003140732505 0.5228081236999719 1.0019939849515445 1.292845796139935 0.0 0.1352285727724944 0.4844560225703175 0.28500397920577175 0.05974141279836379 0.02687823733984326 2.0796816471995775e-10 9.682003140732505 0.29085181118839065 S(ph)GGGAGSNGSVLDPAER ddPTM_A549_MK2206_60min_R1 2 SGGGAGSNGSVLDPAER 17 0 Q15149-3;Q15149-2;H0YDN1;E9PMV1 Q15149-3 PLEC Plectin 1 S(1)GGGAGSNGSVLDPAER;S(1)GGGAGSNGSVLDPAER 152.9 3.1646e-17 80863000.0 2138.68 2456.0 2183.0 1846.24 3020.4 2586.6000000000004 2530.7 2409.9 3828.5 3699.1000000000004 4054.7 True False 2499.636898294157 2580.999909575834 2492.5822255249905 2298.5688828808643 2576.1031610996847 2860.31229515388 2990.4954320886077 2751.510705009223 2961.3508628582135 2863.470740863477 3047.8060859729453 0.8201430234680441 0.8468386231835698 0.8178283510216459 0.7541716297042883 0.845231976192908 0.9384823753446859 0.9811960957266602 0.9027840444550013 0.9716336208157637 0.9395186767432997 1.0 11.573555400188628 -7.2989427306504835 2.553012605260489 0.9780612821872356 0.8115843554347948 0.8036245585356419 0.03390222343734196 0.08303315342045181 1.0652438626943026 0.0053016455236616225 0.009262108638918057 5.0240883657699265e-08 7.2989427306504835 -0.16647692675244086 S(ph)GGGAGSNGSVLDPAER ddPTM_A549_PD325901_60min_R1 2 SGGGAGSNGSVLDPAER 17 0 Q15149-3;Q15149-2;H0YDN1;E9PMV1 Q15149-3 PLEC Plectin 1 S(1)GGGAGSNGSVLDPAER;S(1)GGGAGSNGSVLDPAER 185.21 2.8090999999999997e-39 104948000.0 34687.0 35517.0 39313.0 37819.0 44397.0 42568.0 42370.0 41496.0 42568.0 44491.0 45570.0 True False 38208.398704780215 38510.14223692235 41981.01658827356 40154.9937368192 41278.70788133522 42221.340321375406 43982.41353575366 40668.32972701774 40779.01499420751 41681.83066711844 39965.17889203074 0.9560422288613643 0.963592389789139 1.0504398516941154 1.0047495056959774 1.032866836223931 1.0564531797903338 1.1005183701185428 1.0175940870147642 1.0203636296580936 1.0429536867512936 1.0 15.286455926586877 -5.703407196266478 8.797825676881502 1.0227624437949712 0.9592214159209109 0.4585058939525152 0.029167818265673308 0.2449233345356372 33.8284953728218 0.004382383256434928 0.017012730881035585 1.97967000874375e-06 5.703407196266478 -0.06354102787406024 S(ph)GGGDLTLGLEPSEEEAPR ddPTM_A549_MK2206_60min_R1 3 SGGGDLTLGLEPSEEEAPR 19 0 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 1 S(0.967)GGGDLT(0.033)LGLEPSEEEAPR;S(0.999)GGGDLT(0.001)LGLEPSEEEAPR;S(0.992)GGGDLT(0.008)LGLEPSEEEAPR 138.55 3.3583000000000004e-17 11465770.0 2470.91 1903.38 2015.7800000000002 2070.13 3274.48 3065.28 2989.74 2631.23 4165.5 3363.46 3623.61 True False 2887.9392000505063 2000.2539120066986 2301.6479150566934 2577.3119429316666 2792.8083296774257 3389.6458950318106 3532.9370581786025 3004.2149103039187 3222.0209009366313 2603.6520499755793 2723.7676304516785 1.0602737060839524 0.7343702486379131 0.8450235950102007 0.9462304765345474 1.0253474997110155 1.244469556483315 1.297077261173245 1.1029629975467965 1.1829279652619735 0.9559009442901043 1.0 11.411387914335673 -6.769898202053921 2.573155094140575 1.117231899074054 0.8706093929238783 0.4618071920312834 0.11738239135766604 0.19304043317547412 2.6114672323509356 0.017714249089382732 0.03853146307787 1.6986417647695985e-07 6.769898202053921 -0.24662250615017567 S(ph)GGGDLTLGLEPSEEEAPR ddPTM_A549_PD325901_60min_R1 3 SGGGDLTLGLEPSEEEAPR 19 0 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 1 S(1)GGGDLTLGLEPSEEEAPR;S(0.999)GGGDLT(0.001)LGLEPSEEEAPR;S(1)GGGDLTLGLEPSEEEAPR 159.95 1.2653e-26 21006800.0 4922.7 4551.35 5040.139999999999 4689.9 5239.98 4531.24 4877.29 5265.610000000001 3645.8999999999996 4362.13 4537.41 True False 5422.448880099796 4934.908237464218 5382.194209223945 4979.584471464298 4871.9418817496435 4494.339083767833 5062.897939905493 5160.5832777588685 3492.675501958776 4086.704367354236 3979.337335011831 1.362651221446064 1.240133173441941 1.3525352982440588 1.2513602271543771 1.224309846487332 1.1294189724064876 1.272296745329946 1.2968448873017009 0.877702795193761 1.0269811336168326 1.0 11.958312488524129 -8.758207084981166 24.99999999995781 0.942248533467737 1.2619568684377533 0.7803284093200851 0.07001370668666212 25.184240286248546 194785.9153352668 0.012516680244326481 0.013905441654127321 1.7449898896032103e-09 8.758207084981166 0.3197083349700164 S(ph)GGGPSGGGPGGSGR ddPTM_A549_MK2206_60min_R1 2 SGGGPSGGGPGGSGR 15 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 S(0.997)GGGPS(0.003)GGGPGGSGR;S(1)GGGPSGGGPGGSGR 76.358 0.0006211000000000001 10469400.0 924.76 845.5 880.22 834.21 1131.87 788.9000000000001 892.02 1019.34 1276.93 1618.35 1646.51 True False 1080.836879788704 888.532338577512 1005.0484317689447 1038.5914874491102 965.3734223791229 872.3808743705624 1054.0884875060967 1163.8345665978266 987.7073938381976 1252.7636110071116 1237.636125635759 0.8733074749522933 0.7179269578294536 0.8120710206747264 0.8391735389233229 0.7800139333224634 0.7048767051159166 0.8516949898861621 0.9403689359826811 0.7980596019939414 1.012222886079365 1.0 10.273371498322263 -12.365792773915475 0.2942752750241201 1.27501879154539 0.79037721818368 0.603203296889643 0.06158665906199936 5.527875398902946 0.2757289582881012 1.0178133970001133 0.026515871392399686 4.307320877333603e-13 12.365792773915475 -0.4846415733617101 S(ph)GGGPSGGGPGGSGR ddPTM_A549_PD325901_60min_R1 2 SGGGPSGGGPGGSGR 15 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 S(1)GGGPSGGGPGGSGR;S(1)GGGPSGGGPGGSGR 117.31 8.589799999999999e-07 13761600.0 1307.6 1349.32 1329.8899999999999 1641.1299999999999 1887.73 1705.42 1487.52 1868.75 1625.54 1677.6100000000001 1952.1 True False 1440.3465893957566 1463.0319318389525 1420.144332678227 1742.498872823345 1755.1423571149605 1691.5316249501982 1544.1283876021766 1831.4763152439857 1557.2242067676211 1571.6854182972872 1712.004075381461 0.8413219396541595 0.854572692248391 0.8295215841479798 1.0178123392814291 1.0251975344882795 0.988041821438596 0.9019420045820399 1.069785020713753 0.9095914134553958 0.918038362699044 1.0 10.741470420703498 -6.2520283203641815 24.72956612669711 0.9708204998104174 0.8430821224651366 0.5933991698526693 0.050186302563510525 338.5045643991908 889490.1345483046 0.007227669246245207 0.018850730542886954 5.597211008649454e-07 6.2520283203641815 -0.12773837734528082 S(ph)GGGYGGDR ddPTM_A549_PD325901_60min_R1 1 SGGGYGGDR 9 0 Q92804-2;Q92804;A0A075B7F4;A0A075B7C1 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 S(1)GGGYGGDR 69.346 0.004051099999999999 4971900.0 1343.9 1503.3 1482.5 1563.5 1432.1 1201.5 1214.8 1327.0 1403.1 1621.4 1604.0 True False 1480.3317386731087 1629.9883668318084 1583.1113649967062 1660.073844033868 1331.5142364767914 1191.7153823560557 1261.029878764067 1300.5319439886382 1344.1325864116834 1519.0245272901452 1406.718168593752 1.0523300059122331 1.158717078674865 1.125393415924448 1.1801040756396763 0.9465394463539635 0.8471600132579313 0.8964339175519965 0.9245149263187065 0.9555095088843324 1.0798357206181977 1.0 10.458117602931194 -6.769456110261838 24.999829445345743 0.9559850839904974 1.1309817337567338 0.6536332674520158 0.06262800885621 77.84646711220047 242761.43388120612 0.008400053945349562 0.016074834793732458 1.7003717842886955e-07 6.769456110261838 0.1749966497662364 S(ph)GGNEVSIEER ddPTM_A549_MK2206_60min_R1 3 SGGNEVSIEER 11 0 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 S(1)GGNEVSIEER;S(1)GGNEVSIEER;S(1)GGNEVSIEER 201.06 4.4618e-24 49843000.0 4112.57 5813.0 4989.6 4547.83 7612.9 6084.2 5259.7 5537.2 7854.700000000001 6966.3 7127.7 True False 4806.671273317 6108.856870669516 5697.200308052906 5662.048554159847 6493.052494747645 6728.026005634902 6215.319407340437 6322.115056963807 6075.622991378458 5392.607991694528 5357.695375487547 0.8971527749241615 1.1402023524179208 1.0633677185378356 1.0568067344897534 1.2119114730663054 1.2557686718093142 1.160073309837039 1.1800064419281207 1.1339993347093908 1.0065163496167986 1.0 12.387396840316612 -3.836045720189281 11.389987392595165 1.093764585388869 0.6550097388875011 0.0 0.10142795270612909 0.0 0.0 0.013850828481362012 0.0 0.00014586606922328263 3.836045720189281 -0.43875484650136776 S(ph)GGNEVSIEER ddPTM_A549_PD325901_60min_R1 3 SGGNEVSIEER 11 0 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 S(1)GGNEVSIEER;S(1)GGNEVSIEER;S(1)GGNEVSIEER 226.06 1.3352999999999999e-39 85888000.0 6842.11 5917.37 6416.37 6416.3099999999995 6573.82 7028.21 6484.68 6369.4 6176.8 6454.3099999999995 6629.75 True False 7536.715970304838 6416.047536911817 6851.823452967228 6812.630896202709 6112.0975616478345 6970.974587955599 6731.4580459530525 6242.357320302364 5917.210576400606 6046.7837651005675 5814.332779447902 1.296230583317332 1.1034881869147246 1.1784367549766976 1.1716960749621215 1.0512122015534526 1.1989294132933213 1.157735255496029 1.0736154184995075 1.0176938267648439 1.0399789613821757 1.0 12.50539793018506 -8.48910990214535 2.16547189575445 1.007431925724091 1.1614172267159273 0.5578171060119155 0.05780982333260044 0.14563065320857094 1.3469949855131655 0.009352050015275637 0.011109592437379709 3.2425755066093638e-09 8.48910990214535 0.15398530099183638 S(ph)GGQVRDEYR ddPTM_A549_MK2206_60min_R1 2 SGGQVRDEYR 10 1 C9JQX9;B3KSB0;P52298-3;P52298-2;P52298 C9JQX9 NCBP2 Nuclear cap-binding protein subunit 2 1 S(0.989)GGQVRDEY(0.011)R;S(0.983)GGQVRDEY(0.017)R 52.891000000000005 0.0062102 11308000.0 1933.06 2018.7 1282.6799999999998 1414.27 2123.49 1355.4299999999998 1441.1100000000001 1661.04 2045.2399999999998 2298.2 2694.8 True False 2259.313269220501 2121.4432074351535 1464.5833115146088 1760.766213488993 1811.1274339701938 1498.860702938383 1702.941032970014 1896.4975067216556 1581.9964055771543 1779.0350238307792 2025.6067873035963 1.1153760361496443 1.0473124501419797 0.7230343621943532 0.8692537093207768 0.8941159978936936 0.739956398415116 0.8407066187001172 0.9362614297151889 0.7809987681187829 0.8782726415519948 1.0 10.984138428660664 -5.590001169606769 7.919108764802054 0.8725671216684093 1.098690644776442 0.5452465097527989 0.08003769540373794 0.15083978136897955 15.317755925063201 0.013364314954791076 0.052382975205147946 2.570388860396182e-06 5.590001169606769 0.22612352310803263 S(ph)GGSGHAVAEPAS(ph)PEQELDQNK ddPTM_A549_PD325901_60min_R1 1 SGGSGHAVAEPASPEQELDQNK 22 0 P46013 P46013 MKI67 Antigen KI-67 2 S(0.5)GGS(0.5)GHAVAEPAS(1)PEQELDQNK 59.975 0.00054178 1570500.0 862.31 744.83 932.98 1179.6 985.23 731.62 816.19 885.43 817.34 914.99 911.04 True False 949.8510764009297 807.5994380811125 996.2976332645042 1252.4612129340264 916.0308436589833 725.6619292878379 847.2505570863059 867.7694040436025 782.9900421764136 857.2173752468301 798.9878555583869 1.1888179148068645 1.0107781144141512 1.2469496580373225 1.5675597622929096 1.1464890702485069 0.9082264820917662 1.0604047998879655 1.0860858497494263 0.979977401069766 1.0728791048366417 1.0 9.642029764443816 -7.005878238818916 24.981259255978546 1.0000990083291779 1.2508807944750608 0.41446828248403667 0.13037534565328474 187.6239365649934 797367.4699517903 0.01888443176532233 0.03489049362320389 9.86556043119852e-08 7.005878238818916 0.250781786145883 S(ph)GHFDVTTVASIK ddPTM_A549_MK2206_60min_R1 2 SGHFDVTTVASIK 13 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.999)GHFDVT(0.001)TVASIK;S(0.999)GHFDVT(0.001)TVASIK 82.59 0.00015961 17664600.0 2533.1 2559.3999999999996 2549.5 1801.08 3584.3 2442.5 2047.52 2737.8 3634.1 3163.4 3605.3999999999996 True False 2960.625351650987 2689.6625279187256 2911.057436544186 2242.3446808535537 3057.0542180934995 2700.9637287997193 2419.5278804718314 3125.8915341608563 2810.982152465206 2448.785742923283 2710.0796760221106 1.092449560743775 0.9924662185086184 1.074159354907629 0.8274091351236196 1.1280311221626822 0.9966362807326123 0.8927884673941562 1.1534315990108008 1.0372322914842125 0.9035844091925895 1.0 11.404119551928403 S(ph)GHFDVTTVASIK ddPTM_A549_PD325901_60min_R1 2 SGHFDVTTVASIK 13 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.998)GHFDVT(0.001)TVASIK;S(0.975)GHFDVT(0.019)T(0.006)VASIK 74.89 0.00034185 24522000.0 3909.5 3957.5 3933.6 4279.6 4944.700000000001 4363.200000000001 4592.4 4375.9 4434.4 5924.3 4384.299999999999 True False 4306.3895619782115 4291.012413847459 4200.5577506583795 4543.941172323208 4597.401330288942 4327.667545814353 4767.166295057704 4288.619241672856 4248.037589041387 5550.2386869526335 3845.058894367575 1.1199801304178763 1.115980933382617 1.0924560237065697 1.181761137385799 1.1956647366373072 1.125513981633344 1.2398161968444426 1.1153585314271857 1.1048042970847898 1.443472997275253 1.0 11.908789980628466 -9.826332401310209 0.7103621224544674 1.0079524595278944 1.1499094236263516 0.0 0.13665506674193043 0.30314779743004117 0.31870703892489505 0.01992399534701973 0.009607722816553926 1.491652288293175e-10 9.826332401310209 0.14195696409845726 S(ph)GIPTSEPGSQ ddPTM_A549_MK2206_60min_R1 1 SGIPTSEPGSQ 11 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(0.738)GIPT(0.131)S(0.131)EPGSQ 81.017 0.0008230000000000001 1101600.0 305.95 231.37 267.02 309.18 342.84 244.39 173.84 270.02 437.05 366.6 360.03 True False 357.58688024066123 243.1457447388278 304.8874511496484 384.9291138796176 292.40869015740185 270.25118758704735 205.42447777859226 308.2961619015688 338.05887282543625 283.78480538524224 270.62461467749495 1.321339083168025 0.8984613059997744 1.1266065044119682 1.4223728848107184 1.0804955436365873 0.9986201288789174 0.7590753635747358 1.1392022202746312 1.2491800615709074 1.0486289494524745 1.0 8.080149255468081 -5.201666930084572 21.038442848657176 1.0982205822822269 1.3213515743588673 0.13899999783643002 0.16722685691125153 16331.622955206372 5746830.876799117 0.024052626629490214 44.140131449014206 6.285402152237801e-06 5.201666930084572 0.22313099207664044 S(ph)GIPTSEPGSQ ddPTM_A549_PD325901_60min_R1 2 SGIPTSEPGSQ 11 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(0.981)GIPT(0.009)S(0.009)EPGSQ;S(0.654)GIPT(0.173)S(0.173)EPGSQ 92.611 0.00029283 3415900.0 695.44 512.15 612.62 670.24 689.81 667.3199999999999 533.0 779.5699999999999 873.0799999999999 730.98 705.26 True False 766.0405568441306 555.3106778905815 654.1960771833276 711.6392025745181 641.3601253153105 661.8855671692406 553.2836066687914 764.0208647891656 836.3874838174847 684.825798050173 618.5174910114902 1.2385107421802886 0.8978091742926402 1.0576840375419143 1.1505563107208847 1.036931266513522 1.0701161677527158 0.8945318680705072 1.2352453663674523 1.3522454837125166 1.1072052254015416 1.0 9.272670583422183 -8.294345688957737 24.98653409964451 1.1761538695711165 1.0481351598611857 0.19317745196615854 0.1220688683249872 978.4230926475273 742936.8369075743 0.0249434964534062 0.030156434444939775 5.0775511963884724e-09 8.294345688957737 -0.1280187097099308 S(ph)GKDSEAWVPDSEER ddPTM_A549_MK2206_60min_R1 2 SGKDSEAWVPDSEER 15 1 Q96F63;M0QXS4 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 S(0.922)GKDS(0.078)EAWVPDSEER;S(0.973)GKDS(0.027)EAWVPDSEER 128.32 9.041499999999999e-10 20725000.0 3008.1000000000004 3563.7 2491.5 2371.46 6109.3 4817.2 4066.4 4032.4 6667.5 4792.9 5302.4 True False 3515.7937390159627 3745.0771082065967 2844.832164404724 2952.467806458884 5210.630062940775 5326.952906601434 4805.212243665828 4604.00504870708 5157.321895809624 3710.1805611863833 3985.6677412047566 0.8821090886901767 0.9396360538258425 0.7137655091000662 0.7407711826893114 1.3073418060095863 1.336527089684411 1.205622885718353 1.1551402042648486 1.293966840861328 0.9308805455180513 1.0 11.960605731894834 -6.755998666583753 24.9999950376243 1.173126719989307 0.8201604646339935 0.636137669907482 0.12971508719907737 72.45175622879714 332911.0505513385 0.020112868945280183 0.040932718096015994 1.7538858867970042e-07 6.755998666583753 -0.35296625535531345 S(ph)GKNSQEDS(ph)EDSEDKDVK ddPTM_A549_MK2206_60min_R1 1 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 S(0.786)GKNS(0.214)QEDS(0.985)EDS(0.015)EDKDVK 91.583 1.6269999999999998e-06 30357000.0 2937.0 2390.5 2592.1 2244.8 3839.3 2338.1 1715.0 2199.5 3421.0 3542.8 4045.0 True False 3432.693797244066 2512.166239348957 2959.6987571155864 2794.776100772902 3274.544055889957 2585.5161900948297 2026.5933006804287 2511.285860686247 2646.148962214431 2742.479019418539 3040.514863679323 1.1289843829574864 0.8262305405437117 0.9734202560463918 0.9191785687871781 1.0769702509947396 0.8503547280693442 0.6665296476229197 0.8259409913383364 0.8702963415256354 0.901978494556632 1.0 11.570099926878084 -7.297255511454109 24.930202809428817 0.8997141895688004 0.9718435173214132 0.20185219955711442 0.10991971187086169 1256.850819589185 874841.6275237885 0.018373132780622102 0.029372227594267046 5.0436447404234294e-08 7.297255511454109 0.07212932775261272 S(ph)GKNSQEDSEDSEDKDVK ddPTM_A549_MK2206_60min_R1 3 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.954)GKNS(0.046)QEDSEDSEDKDVK;S(0.559)GKNS(0.435)QEDS(0.006)EDSEDKDVK;S(0.977)GKNS(0.023)QEDSEDSEDKDVK 196.02 3.51e-49 328144000.0 36406.1 41921.7 40917.9 35040.7 51488.0 37195.6 36658.4 31046.3 53654.2 60500.8 56378.9 True False 42550.559636311635 44055.33546794189 46720.67349785112 43625.67307303679 43914.18340574116 41131.61370355896 43318.756765984486 35447.20810030617 41501.60936815126 46833.62726036954 42378.46315151797 1.0040609420917026 1.039568974231758 1.1024626667278663 1.0294302772863566 1.0362382243247579 0.970578228769149 1.022188006466979 0.8364439260944854 0.9793089763488673 1.1051280244147312 1.0 15.371043649093265 -7.163029176610891 2.701143479105362 0.9783543593433882 1.0474453290133996 0.15890432036509583 0.06330973974533995 0.28765451915768075 4.087245534731255 0.00770956853470012 0.014124795818392722 6.870222831874528e-08 7.163029176610891 0.06909096967001138 S(ph)GKNSQEDSEDSEDKDVK ddPTM_A549_PD325901_60min_R1 3 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(1)GKNSQEDSEDSEDKDVK;S(0.999)GKNS(0.001)QEDSEDSEDKDVK;S(1)GKNSQEDSEDSEDKDVK 176.9 2.276e-31 295974000.0 24387.9 22353.6 24953.6 23876.4 28117.6 29429.0 27363.5 28510.1 27664.4 26869.8 28176.7 True False 26863.741654576927 24237.416321966015 26647.101354186732 25351.191000761268 26142.71677645406 29189.339981153862 28404.83296638173 27941.44368975924 26501.76147354245 25173.23624237125 24711.14452681769 1.087110377482643 0.9808293701516916 1.0783434707068322 1.0259011262407927 1.0579322519069387 1.1812216932921187 1.1494745998331026 1.1307223612988009 1.0724619187420275 1.0186997293893885 1.0 14.592874211945192 -4.868884094138554 19.92579105299336 1.057714006029625 13.14422618283416 0.0 0.06136613377966269 3298.320158630919 497396.7345531837 0.009222867256824025 14023.51102212199 1.3524334566792512e-05 4.868884094138554 12.086512176804534 S(ph)GKQGSPDQVSPVSEMTSTSLYQDK ddPTM_A549_PD325901_60min_R1 1 SGKQGSPDQVSPVSEMTSTSLYQDK 25 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.611)GKQGS(0.389)PDQVSPVSEMTSTSLYQDK 91.113 5.1317e-09 2888800.0 389.94 324.39 491.08 535.14 512.22 759.99 591.12 675.86 732.58 633.85 505.17 True False 429.52642174134405 351.72748374680407 524.4076419039345 568.1943824088801 476.2434342630701 753.8008934138813 613.6153950732754 662.3794420980873 701.7922102155735 593.8286028264824 443.03729253647526 0.969503987536176 0.7939003999710619 1.1836647856472715 1.2824978663892062 1.0749511210139517 1.701438921988313 1.3850197385421148 1.4950873284409882 1.5840477134502056 1.340358052990748 1.0 8.791284332105803 -5.9317186052495945 3.32921916196386 1.3201490709280101 0.881447672950055 0.44904236276645126 0.19851809468326254 0.21978364043142617 4.882829568066142 0.03558662663518707 0.12615206897996495 1.1702573965687024e-06 5.9317186052495945 -0.43870139797795515 S(ph)GKYDLDFK ddPTM_A549_MK2206_60min_R1 2 SGKYDLDFK 9 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 S(0.983)GKY(0.017)DLDFK;S(0.81)GKY(0.19)DLDFK 54.776 0.0053138000000000005 15320700.0 2101.66 2290.83 1829.8899999999999 1805.27 2592.2 1852.8899999999999 2116.0099999999998 2233.2 2803.1 2282.56 2495.1 True False 2456.36882734626 2407.4234620739444 2089.3959178497134 2247.5612310416504 2210.8908138665747 2048.9615899511614 2500.461626922911 2549.7629388881683 2168.202325630888 1766.928110693231 1875.4978087432091 1.3097156477043812 1.2836183816643243 1.1140487118189915 1.1983811554265504 1.178828790713499 1.092489460877692 1.3332255656424876 1.3595126195304867 1.156067640027702 0.9421115303127271 1.0 10.873057862075145 -9.821400283769798 0.963003358434795 1.0220680840471765 1.224351088293368 0.5384025698773394 0.08814806174508809 0.31180514061014014 0.5949167152065269 0.030468258434134303 0.017820575688907492 1.5086889734660677e-10 9.821400283769798 0.2022830042461914 S(ph)GKYDLDFK ddPTM_A549_PD325901_60min_R1 2 SGKYDLDFK 9 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 S(1)GKYDLDFK;S(0.995)GKY(0.005)DLDFK 83.617 0.00039563 32036000.0 3684.7 3708.1 5159.0 4221.2 4566.3 3397.2 4532.0 4507.2 4510.0 4141.5 4591.8 True False 4058.768031467225 4020.59460057808 5509.120763587192 4481.933936959233 4245.578840879809 3369.5343295380717 4704.467740005555 4417.300360170002 4320.460383947472 3880.0049832071904 4027.037709818447 1.0078793207154269 0.9984000375202204 1.3680330706005637 1.1129605084232732 1.054268459053296 0.8367277816452288 1.168220433728605 1.096910602401374 1.0728631553197583 0.9634886144093532 1.0 11.975503266633696 -14.999999999422387 0.15986052782731233 0.6790159006573487 1.1058529245589552 0.08432419272627423 0.12247698804934128 136.9168918935232 1.4120581165056618 13.736903251095809 0.1978221929052099 1.0000000013300022e-15 14.999999999422387 0.4268370239016065 S(ph)GKYDLDFKSPDDPSR ddPTM_A549_PD325901_60min_R1 1 SGKYDLDFKSPDDPSR 16 2 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 S(0.767)GKY(0.001)DLDFKS(0.168)PDDPS(0.065)R 45.047 0.014988 5447400.0 2309.1 2605.1 2710.7 2928.6 3438.6 3239.9 2956.4 3083.4 2996.1 3128.3 3984.8 True False 2543.518132130425 2824.640919599246 2894.6644027632888 3109.4929706668267 3197.0845985260107 3213.5153285854235 3068.9074198041535 3021.8991681194925 2870.1843362184077 2930.778604120984 3494.6948617284215 0.7278226662892223 0.8082653940785613 0.8283024748351371 0.8897752432465362 0.9148394137463499 0.9195410345485984 0.8781617684029557 0.8647104504640237 0.8212975523702403 0.8386364818905724 1.0 11.7709507772615 -14.999999999997835 0.2734266412505185 2.095329702183483 0.8386642871704555 0.0 0.07111871518842412 27.996266697555615 0.367244597583475 16.77254563670335 0.024426732339623742 1.0000000000049859e-15 14.999999999997835 -1.2566654150130274 S(ph)GLFPR ddPTM_A549_MK2206_60min_R1 3 SGLFPR 6 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 S(1)GLFPR;S(1)GLFPR;S(1)GLFPR 86.794 0.039123000000000005 17326300.0 3298.8399999999997 3511.2 3351.5299999999997 2908.9800000000005 4136.96 3139.28 2929.74 2979.54 4500.46 4053.3500000000004 4388.04 True False 3855.6035431054165 3689.905082452226 3826.8273505789125 3621.6802305890733 3528.4186641977744 3471.476525914586 3462.0358348311847 3401.898919458557 3481.1129957578364 3137.695419826164 3298.368564256965 1.168942605410133 1.1187061150285562 1.1602182339622786 1.0980216916434693 1.0697466324514993 1.0524829042859307 1.0496206737924358 1.0313883525096337 1.0554044910205598 0.9512870859333465 1.0 11.687536901180577 -2.000000000000008 0.17627107754091081 0.9993825158993495 1.7292286050595367 0.8350216528628448 0.02524326202964818 12.899707164849424 0.13381283822630466 0.02191377854458653 2.5344521950631513 0.009999999999999816 2.000000000000008 0.7298460891601872 S(ph)GLFPR ddPTM_A549_PD325901_60min_R1 2 SGLFPR 6 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 S(1)GLFPR;S(1)GLFPR 86.794 0.039123000000000005 31488000.0 4836.6 5793.200000000001 5776.2 5824.9 6296.6 6833.9 6058.4 7159.3 6170.0 7039.7 7464.1 True False 5327.608071483266 6281.413295237166 6168.207667112294 6184.690843692273 5854.348538090756 6778.24698417232 6288.955727283688 7016.502145137798 5910.696356752973 6595.212140597279 6546.063018828322 0.8138644642068925 0.9595711616539667 0.9422774650000757 0.9447954940096603 0.8943312218736666 1.0354692529962164 0.9607233705503414 1.07186596355036 0.902939116191235 1.0075081956326406 1.0 12.67641177591025 -5.26092125502282 6.8047099576482974 0.9614755621969647 0.8113848996961194 0.42013639952014104 0.05208970135737 0.09043705287738224 28.746893819789957 0.007213041485003494 0.06180615816545783 5.483763858741978e-06 5.26092125502282 -0.15009066250084535 S(ph)GLSDIILGK ddPTM_A549_MK2206_60min_R1 1 SGLSDIILGK 10 0 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;K7EJR2;M0R330;M0QX30;M0R1V5 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.56)GLS(0.44)DIILGK 59.426 0.0092208 6371400.0 632.85 787.13 624.39 594.67 950.5 712.05 787.65 704.9 1192.8 820.03 822.14 True False 739.659608302999 827.1915548959396 712.9378908820648 740.3641766957508 810.6827091197363 787.3986583794634 930.7558094932597 804.8217336657125 922.6327045101935 634.784653464431 617.9799480903142 1.1968990427419208 1.3385410925583143 1.1536586147903185 1.198039158040045 1.311826883096957 1.2741492030812456 1.5061262300977363 1.3023427963201364 1.4929816207812556 1.0271929622086393 1.0 9.271416216804063 -11.016097362666901 1.3175425493842516 1.000946500115766 1.3265869673316582 0.5212726923237194 0.10766014258990937 0.29205544316366444 0.9071936449046992 0.08385725531401139 0.01921768177692417 9.636129710376135e-12 11.016097362666901 0.3256404672158921 S(ph)GLSLEELR ddPTM_A549_PD325901_60min_R1 1 SGLSLEELR 9 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 S(0.881)GLS(0.119)LEELR 54.066 0.020543000000000002 749580.0 347.34 352.48 499.59 467.65 346.44 401.02 452.62 395.58 420.08 466.84 672.42 True False 382.6017011018065 382.1847266286678 533.4951816787216 496.5356783897908 322.10724955311764 397.754226077757 469.8447017831678 387.6898465734935 402.42549846755054 437.36364272858697 589.7166028215782 0.6487890950860079 0.6480820190580588 0.9046636623865468 0.8419903323292056 0.5462068525999646 0.6744836827972088 0.7967296486738422 0.6574172148427557 0.6824048984581607 0.7416505498335334 1.0 9.203878001996568 -10.702988547871668 0.8440519724921223 1.0099283334462896 0.7125644466422116 0.0748584862725743 0.12204079708308994 0.41808939869443584 0.5016812816769004 0.080551528851771 0.01849757180169074 1.9815792783709024e-11 10.702988547871668 -0.297363886804078 S(ph)GNGNKPPSTDLK ddPTM_A549_MK2206_60min_R1 2 SGNGNKPPSTDLK 13 1 P51153;A0A087WWB9 P51153 RAB13 Ras-related protein Rab-13 1 S(0.994)GNGNKPPS(0.003)T(0.003)DLK;S(0.995)GNGNKPPS(0.002)T(0.002)DLK 51.193000000000005 0.007441 14860600.0 4078.2999999999997 4666.1 4684.6 3746.4 5131.2 4448.8 4128.9 4209.3 7218.700000000001 6766.8 6912.5 True False 4766.617335138059 4903.584559475494 5348.946721802273 4664.268168182287 4376.407277259536 4919.569063125567 4879.067684652724 4805.981165440611 5583.675975895154 5238.175180253298 5195.935474705395 0.9173742357545968 0.9437346909612119 1.0294482577471873 0.8976763069689095 0.8422751395902727 0.9468110385655822 0.9390162191976341 0.9249501247343928 1.0746238099139873 1.008129374537758 1.0 12.343167799570177 -8.749836221339555 24.939232209890783 1.0352390210102187 0.93076064262205 0.4727288126967921 0.04562539874506869 133.48647140203818 286908.7685333108 0.008504805329057808 0.009604009317977608 1.7789501511026384e-09 8.749836221339555 -0.10447837838816865 S(ph)GNGNKPPSTDLK ddPTM_A549_PD325901_60min_R1 2 SGNGNKPPSTDLK 13 1 P51153;A0A087WWB9 P51153 RAB13 Ras-related protein Rab-13 1 S(1)GNGNKPPSTDLK;S(1)GNGNKPPSTDLK 87.287 5.4243e-05 55368000.0 25234.4 26641.0 26653.0 26425.8 31246.4 31109.1 29449.9 29621.8 28776.2 30083.4 33166.6 True False 27796.177711416556 28886.130566597614 28461.8328575091 28058.061648653777 29051.76065822808 30855.757803789213 30570.63206010362 29030.96996114743 27566.836385931103 28183.928989934822 29087.318460399958 0.9556115579804585 0.9930833124381594 0.9784962782408971 0.9646149295904526 0.998777549665835 1.0607976065513514 1.0509951992213746 0.998062781231304 0.9477269767394039 0.9689421535472571 1.0 14.82810268106841 -5.255535927170818 22.152100688735324 0.9882080141642637 0.955611488027296 0.06586022034826622 0.03336297637561866 343.2392149264097 1287761.2774927595 0.0053155082485793394 0.06279836728430975 5.552186845497177e-06 5.255535927170818 -0.03259652613696773 S(ph)GNLPSK ddPTM_A549_MK2206_60min_R1 2 SGNLPSK 7 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)GNLPSK;S(1)GNLPSK 96.95700000000001 0.011703 61792000.0 15239.099999999999 17634.7 15952.400000000001 16162.0 23496.0 18203.2 16248.800000000001 17167.3 24576.0 23845.0 25457.0 True False 17811.087519775974 18532.23090610625 18214.690194441067 20121.69072553975 20039.76952496299 20129.450541693783 19200.996632126025 19600.81734765128 19009.57523980762 18458.397938928283 19135.324322542536 0.930796218530431 0.9684827178118008 0.9518882401686337 1.051546887127239 1.0472657367690896 1.051952410233262 1.003431993546413 1.024326372381385 0.993428432117726 0.9646242534380881 1.0 14.223950732845305 -6.228301094163358 23.88805782796632 1.0097189008844234 0.9521983845839588 0.526938661140637 0.02748985047473266 260.17813022088274 187551.1307437641 0.0038630941431297586 0.010219690338914787 5.911516496289801e-07 6.228301094163358 -0.05752051630046462 S(ph)GNLPSK ddPTM_A549_PD325901_60min_R1 2 SGNLPSK 7 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)GNLPSK;S(1)GNLPSK 95.48299999999999 0.011890000000000001 93053000.0 16227.3 15998.5 16766.4 15836.4 18683.1 15243.1 15328.900000000001 17141.199999999997 17042.8 15248.5 18485.3 True False 17874.683550093112 17346.749741740634 17904.26872855365 16814.57846092609 17370.86350919597 15118.965247433696 15912.249677795948 16799.305318988736 16326.55038393347 14285.707107674712 16211.725287971389 1.1025775007028764 1.0700125639688332 1.1044024254369815 1.0371862440453516 1.0714999915576306 0.9325944635054674 0.981527221510616 1.0362441393855417 1.0070828424441216 0.8811959772273144 1.0 13.984750013399958 -7.109953854711615 10.327120695717154 0.9999276437609155 1.0766183628667247 0.518906995662572 0.046107148064400236 0.2165006144116589 19.0207435522683 0.004194525262027163 0.007270393356260837 7.763295999473198e-08 7.109953854711615 0.07669071910580927 S(ph)GNSDSIER ddPTM_A549_PD325901_60min_R1 2 SGNSDSIER 9 0 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 S(1)GNSDSIER;S(0.874)GNS(0.123)DS(0.003)IER 130.69 4.9309e-05 317950000.0 2114.02 2295.7200000000003 1988.48 2402.9 2270.9 2264.6 2187.7 2307.3999999999996 2142.5 2171.3999999999996 2325.8 True False 2328.633754140731 2489.18838123004 2123.430210501619 2551.321675618152 2111.3998181797 2246.157848425736 2270.954120655375 2261.3770968797185 2052.458175744446 2034.297433426557 2039.741344460942 1.141631884093685 1.22034511286914 1.041029156107435 1.2508064723728043 1.035131157150563 1.1011973917797628 1.1133539685422895 1.1086587537290664 1.0062345313135108 0.9973310777618112 1.0 10.994170503171405 -8.219185063221254 0.5473574552278394 0.9937242169967782 1.155967365474138 0.45229517409863895 0.06134766346707268 0.4374443980427856 0.2841939172364867 0.016724603870556316 0.024300135228179216 6.036913273078189e-09 8.219185063221254 0.16224314847735988 S(ph)GPIKPEK ddPTM_A549_MK2206_60min_R1 2 SGPIKPEK 8 1 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 S(1)GPIKPEK;S(1)GPIKPEK 47.559 0.010401 15108000.0 4561.8 4826.4 4512.1 4146.299999999999 6445.799999999999 4796.1 4237.4 4589.6 6994.4 6905.0 6334.1 True False 5331.720314697986 5072.043144778833 5151.983627939214 5162.143686134477 5497.631358699624 5303.620118606479 5007.280730205978 5240.1898550605165 5410.179567761655 5345.155704269228 4761.168157733305 1.1198344897854458 1.0652938473808347 1.082083946052426 1.0842178883663014 1.154681199354432 1.113932535651382 1.0516916362369866 1.1006101195037952 1.1363134820126435 1.1226563581014009 1.0 12.217099868406942 -10.901507354942451 1.101836043835226 0.998837387226959 1.1022461398989396 0.0 0.04569284293109333 0.28016059482847006 0.5928322350229698 0.022630466088815873 0.005151938954765639 1.2545634911675669e-11 10.901507354942451 0.10340875267198057 S(ph)GPIKPEK ddPTM_A549_PD325901_60min_R1 1 SGPIKPEK 8 1 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 S(1)GPIKPEK 50.353 0.008776 8001500.0 4066.8 4208.9 4819.2 4263.1 5067.2 5269.8 4799.5 5015.1 4349.4 4881.1 5605.2 True False 4479.658542180075 4563.598774135836 5146.2598922038 4526.422004797426 4711.297352891002 5226.884495996619 4982.147598887175 4915.069896230161 4166.6098434459245 4572.906512986264 4915.795934290335 0.9112783773085522 0.9283539909177813 1.0468823281100532 0.9207912747604482 0.958399700855594 1.063283457219262 1.013497644223594 0.9998523050855083 0.8475961775348663 0.9302474256687036 1.0 12.263209312110261 S(ph)GPLEESER ddPTM_A549_MK2206_60min_R1 1 SGPLEESER 9 0 A0A2R8Y4Z8;Q9Y3X0 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(1)GPLEESER 61.353 0.0076712 19721000.0 166.28 110.55 212.84 231.81 168.09 247.07 241.24 245.19 261.11 267.28 383.05 True False 194.34399884431164 116.17652280277224 243.02391245109422 288.6034604063466 143.36418366747654 273.21478340820727 285.07018533886105 279.94643336288306 201.96900190698918 206.90126236597823 287.928113357816 0.674974029377934 0.4034914182152006 0.8440437080525092 1.0023455404915298 0.4979165875661263 0.9488992937229297 0.9900741612702357 0.9722789139905421 0.7014563446119513 0.7185865247859853 1.0 8.169564850582098 -5.805923982512211 10.458476718142874 0.8635203750968311 0.5395068930820023 0.35451172761576266 0.16270145135384612 0.33028142502177893 76.16124053833983 0.022757218060631 0.07113190428237696 1.5634212748465233e-06 5.805923982512211 -0.3240134820148288 S(ph)GPLEESER ddPTM_A549_PD325901_60min_R1 1 SGPLEESER 9 0 A0A2R8Y4Z8;Q9Y3X0 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(1)GPLEESER 59.542 0.0090807 31016000.0 250.12 225.94 236.73 248.84 334.69 357.43 235.97 269.42 434.31 148.15 196.56 True False 275.5119982713878 244.980756736499 252.79592137313352 264.2102816433562 311.1825290178184 354.5192085855389 244.94996747773857 264.04620674409864 416.05746105370866 138.79578371656285 172.38436609650125 1.5982423726125803 1.421130942926449 1.4664666355626337 1.53268122641383 1.8051667681024945 2.0565624169600043 1.4209523347413935 1.531729429548645 2.4135452098991306 0.8051529663592845 1.0 7.429485129063715 -6.606094589126826 6.925421764584058 1.6901265172614262 1.4897565479537789 0.0 0.43116650431856407 0.7540645743456857 52.14420925615236 0.07277722932712773 0.15232073546949934 2.476882535070682e-07 6.606094589126826 -0.20036996930764728 S(ph)GPLEESERDR ddPTM_A549_MK2206_60min_R1 2 SGPLEESERDR 11 1 A0A2R8Y4Z8;Q9Y3X0 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(0.999)GPLEES(0.001)ERDR;S(1)GPLEESERDR 91.307 8.2691e-05 14295300.0 450.83 518.9300000000001 734.44 519.79 738.72 298.01 419.27 502.93 944.44 573.3199999999999 787.63 True False 526.9190822647406 545.3413204707606 838.5946356915127 647.1385733342596 630.0552665764669 329.54522039697196 495.4459318812149 574.2218676585288 730.525847960771 443.8066138119672 592.0397335178609 0.890006282405781 0.921122839560748 1.4164499242451836 1.093066118196164 1.0642111177787346 0.5566268642795916 0.8368457450267873 0.96990427356377 1.2339135476938934 0.7496230213720585 1.0 9.20955019236132 -13.74049577115707 15.392744198931892 0.8127807411446424 1.0487257520860274 0.0 0.23321853681886584 0.0 0.0 0.0 0.03009436861891814 1.8176247547135832e-14 13.74049577115707 0.23594501094138498 S(ph)GPLEESERDR ddPTM_A549_PD325901_60min_R1 2 SGPLEESERDR 11 1 A0A2R8Y4Z8;Q9Y3X0 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(1)GPLEESERDR;S(1)GPLEESERDR 93.228 8.116199999999999e-05 16825900.0 898.79 940.9200000000001 1141.1100000000001 1061.88 1120.38 1100.9 1551.17 1239.13 1077.32 1276.97 1498.58 True False 990.0344991457724 1020.214630559027 1218.552586651866 1127.469915895544 1041.688373901172 1091.9346354022318 1610.2006231827936 1214.41458007132 1032.0439868812166 1196.341896270937 1314.2641602813133 0.7532994728653784 0.776262992928799 0.9271747822683071 0.8578716136139735 0.7926019786449953 0.8308334567751641 1.225172740644572 0.9240262473652018 0.7852637377407533 0.9102750667832749 1.0 10.36003956369025 -7.57209320484851 24.99994705141135 0.9252689684134462 0.8253156358229353 0.26384002909672966 0.11096792219708701 182.7341843997691 92824.53796088495 0.01962258501569961 0.029105000952992607 2.6785934045872126e-08 7.57209320484851 -0.09995333259051087 S(ph)GPQPR ddPTM_A549_PD325901_60min_R1 1 SGPQPR 6 0 A0A087WTX3;B0QYQ2;J3KR25;Q96RU7 A0A087WTX3 TRIB3 Tribbles homolog 3 1 S(1)GPQPR 69.998 0.051379999999999995 23461000.0 469.24 590.26 536.47 182.28 507.86 364.5 431.0 470.32 441.21 498.08 640.37 True False 516.8768993637697 640.0032817176505 572.8780802561779 193.53902161208399 472.18966562188643 361.5316328495897 447.4019408522499 460.93909864109736 422.6674780491052 466.63114379713556 561.6085496398888 0.9203508381330703 1.13958963432453 1.0200665225333825 0.3446155186493936 0.8407807643324893 0.6437431073323382 0.7966437497063217 0.8207480084422822 0.7526015733202878 0.8308832621874185 1.0 9.133421088432122 -6.0383933475497065 24.981329678930948 0.8164313753835478 1.0424355253887485 0.29296183965751377 0.1694264788662991 583.7163511195769 379805.231382883 0.025709696418279564 0.0680377136294924 9.153910300617771e-07 6.0383933475497065 0.2260041500052007 S(ph)GPTDDGEEEMEEDTVTNGS ddPTM_A549_MK2206_60min_R1 1 SGPTDDGEEEMEEDTVTNGS 20 0 P09661 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 S(0.5)GPT(0.5)DDGEEEMEEDTVTNGS 69.594 0.00036042 3425800.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 167.44 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 129.51510734673613 0.0 0.0 0.0 S(ph)GPTDDGEEEMEEDTVTNGS ddPTM_A549_PD325901_60min_R1 2 SGPTDDGEEEMEEDTVTNGS 20 0 P09661 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 S(0.5)GPT(0.5)DDGEEEMEEDTVTNGS;S(0.5)GPT(0.5)DDGEEEMEEDTVTNGS 88.73 1.62e-06 8443800.0 267.34 0.0 155.16 156.86 350.43 207.98 201.03 0.0 0.0 0.0 0.0 True False 294.4801599946938 0.0 165.69009065287625 166.5488859450927 325.81700571787036 206.2862798355492 208.680306657837 0.0 0.0 0.0 0.0 0.0 S(ph)GQDPYAR ddPTM_A549_MK2206_60min_R1 2 SGQDPYAR 8 0 Q10471-2;Q10471 Q10471-2 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form 1 S(1)GQDPYAR;S(1)GQDPYAR 113.03 0.0013927999999999998 22351000.0 3976.7 4252.6 4014.8999999999996 3823.2 5199.6 4162.299999999999 3721.8 3163.6000000000004 5570.200000000001 5900.5 6376.8 True False 4647.869739019569 4469.039175676793 4584.2731915988425 4759.8841716299685 4434.745727868468 4602.751823288869 4398.002884240477 3612.04998811867 4308.558593781594 4567.572951924775 4793.264569273257 0.9696668464357827 0.9323581269277564 0.9563989480125649 0.9930359784733624 0.9252036193238659 0.9602540725154938 0.9175381038704675 0.7535678316764227 0.8988776921268186 0.9529148424655599 1.0 12.226792857885046 -6.816766187976953 24.98976414654506 0.9323240132858702 0.9602247333683689 0.08265101299114086 0.0611130010525072 292.37209131925715 132056.02603676033 0.010464960630144338 0.01977692920982904 1.5248734821553918e-07 6.816766187976953 0.027900720082498665 S(ph)GQDPYAR ddPTM_A549_PD325901_60min_R1 2 SGQDPYAR 8 0 Q10471-2;Q10471 Q10471-2 GALNT2 Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form 1 S(1)GQDPYAR;S(1)GQDPYAR 104.94 0.0020225 29077000.0 4427.4 4029.3 5077.0 4210.0 4960.1 4952.2 5764.200000000001 5293.3 5307.5 5134.200000000001 5359.6 True False 4876.866388720384 4368.86325182958 5421.555750481133 4470.0421383962785 4611.71968741606 4911.870925096677 5983.559785291273 5187.720978986485 5084.444232328425 4810.0257357919445 4700.403177303665 1.037542143675842 0.9294656409316212 1.1534235566556548 0.9509912170896943 0.9811327908389175 1.0449892785397865 1.272988626631743 1.1036757451011605 1.0817038540181272 1.023321948001738 1.0 12.198568793994882 -7.514195212674682 24.94194221424642 1.0657025153939417 1.0108834195087004 0.14258240076376494 0.08681635932096773 908.9061197195672 2610678.3147389004 0.014023727109377796 0.02138161830355232 3.0605874094080316e-08 7.514195212674682 -0.054819095885241254 S(ph)GQIEGVR ddPTM_A549_MK2206_60min_R1 2 SGQIEGVR 8 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 S(1)GQIEGVR;S(1)GQIEGVR 93.928 0.0025478000000000002 22591000.0 5152.9 5780.0 4920.9 4673.0 7260.5 6170.1 5178.0 5173.0 7780.1 7767.5 9443.6 True False 6022.583543690486 6074.177311623915 5618.757615018743 5817.8852097789395 6192.490067926193 6823.015886619094 6118.775574882368 5906.288591648079 6017.919772266736 6012.816355236965 7098.493489899157 0.8484312273104648 0.8556994974028223 0.7915422649910135 0.8195943573178638 0.8723668024402408 0.9611921031311706 0.8619822760405593 0.8320481803712952 0.8477742186887922 0.8470552750091181 1.0 12.793297159241554 -10.798513337286112 0.6180077881762827 1.0239405457401072 0.85227587332361 0.0 0.060633822611066264 0.6253736182847494 0.3301035630223941 0.060514621747130286 0.00913893963644582 1.5903278437288372e-11 10.798513337286112 -0.1716646724164972 S(ph)GQIEGVR ddPTM_A549_PD325901_60min_R1 2 SGQIEGVR 8 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 S(1)GQIEGVR;S(1)GQIEGVR 92.60600000000001 0.0025809 28769000.0 7634.9 7429.1 6534.8 7782.9 8675.2 7227.2 7343.9 7919.9 8081.299999999999 8513.1 9011.3 True False 8409.98942748368 8055.176329428719 6978.290824944674 8263.632056751634 8065.883879815287 7168.344079370525 7623.3761332362765 7761.931381458648 7741.671064477755 7975.581413145262 7902.967227337209 1.0641559284710973 1.0192597410204363 0.8829963005295048 1.0456366348283523 1.0206146182556006 0.9070446419889553 0.9646220101819736 0.9821540641860815 0.9795904299967848 1.00918821800967 1.0 12.948178710158693 -5.5247858922570785 24.999938190980846 0.9816800098141608 1.0529319161037818 0.25190610289254944 0.045155423173032234 50.8844368301278 667040.4154342932 0.00576597358147231 0.022654199924928137 2.986854779280229e-06 5.5247858922570785 0.07125190628962097 S(ph)GRESVSTASDQPSHSLER ddPTM_A549_MK2206_60min_R1 2 SGRESVSTASDQPSHSLER 19 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.48)GRES(0.48)VS(0.03)T(0.008)AS(0.001)DQPSHSLER;S(0.476)GRES(0.476)VS(0.023)T(0.019)AS(0.005)DQPSHSLER 56.72 0.0020461 7454200.0 750.12 1061.31 545.5899999999999 683.76 880.87 824.24 759.37 640.97 828.4000000000001 1015.99 1242.1399999999999 True False 876.7219173267689 1115.3261457784724 622.9628659753456 851.2812306951524 751.2951898814334 911.4605297137684 897.3376995555086 731.8294603882993 640.7687226829688 786.4771533643004 933.6823566800091 0.9389937713337753 1.1945455944400116 0.6672107077084322 0.9117460821709656 0.8046582271864828 0.9761997998492152 0.9610738525104673 0.7838098847562472 0.6862812798149217 0.8423390971645417 1.0 9.866788011245797 -5.752046235771971 24.999562715203947 0.8517441054529363 1.0667696339234571 0.3364399675786449 0.1183319271621743 199.00865262009813 529643.7927349827 0.018837677365246688 0.07101779489528198 1.7699205193637092e-06 5.752046235771971 0.2150255284705208 S(ph)GRESVSTASDQPSHSLER ddPTM_A549_PD325901_60min_R1 2 SGRESVSTASDQPSHSLER 19 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.484)GRES(0.484)VS(0.026)T(0.006)ASDQPSHSLER;S(0.494)GRES(0.494)VS(0.009)T(0.004)AS(0.001)DQPSHSLER 69.435 0.00034944 9796700.0 717.45 1244.79 998.47 1063.5 1247.0900000000001 1167.9299999999998 1004.7900000000001 1276.83 1189.6 1226.04 1308.07 True False 790.2849958412247 1349.6928218908847 1066.232178487867 1129.189979616257 1159.4987006269412 1158.4187653059575 1043.0278332921853 1251.362623996243 1139.6052489454341 1148.6276251627044 1147.1856825389218 0.6888902187936885 1.176525162782523 0.9294329546792368 0.9843131733628011 1.0107332389825232 1.0097918610195473 0.909205762561282 1.0908108800894023 0.9933921476628693 1.0012569391736055 1.0 10.163883208358657 -5.239431460978254 24.73871437435699 1.0023091484182323 0.6888898408673212 0.6392359669501472 0.06921621623101358 2229.684559519935 2506307.9111504857 0.008122966411766908 0.5663717819044667 5.7619374451254575e-06 5.239431460978254 -0.3134193075509111 S(ph)GRSPQEASSTK ddPTM_A549_MK2206_60min_R1 1 SGRSPQEASSTK 12 1 A0A1B0GVD3;Q6ZN17-2;Q6ZN17 A0A1B0GVD3 LIN28B Protein lin-28 homolog B 1 S(0.5)GRS(0.5)PQEASSTK 53.448 0.0063282 29698000.0 899.93 871.45 949.96 946.45 975.58 549.6 597.68 772.55 1123.7 991.48 1298.9 True False 1051.81618282392 915.8030827361001 1084.678612441465 1178.3302924877553 832.0734743430111 607.7583072050463 706.270719504769 882.0613283351487 869.1837441801681 767.5039793872339 976.3472821837024 1.0772971892454326 0.9379890736089428 1.1109557349465533 1.2068761945568147 0.852231055001241 0.6224816909877923 0.7233806375996878 0.903429900846681 0.8902403479181589 0.7860973174121316 1.0 9.93125058875961 -6.780249486722553 24.99577615328629 0.8957343814042338 1.0748785622213441 0.4462729951980926 0.12310970067849095 245.44461566421316 326158.1326135319 0.02035733293106947 0.038517956621007786 1.658633807614012e-07 6.780249486722553 0.17914418081711037 S(ph)GRSPTGNTPPVIDSVSEK ddPTM_A549_MK2206_60min_R1 1 SGRSPTGNTPPVIDSVSEK 19 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.602)GRS(0.393)PT(0.005)GNTPPVIDSVSEK 122.51 7.166800000000001e-15 37300000.0 4136.4 4569.6 4257.7 4227.2 5845.7 4219.2 4166.6 3790.7 5883.9 6442.1 6741.7 True False 4834.523194729438 4802.173121660316 4861.505882555084 5262.864189766217 4985.805273751963 4665.672943521706 4923.617286656018 4328.043333531875 4551.206044657556 4986.825135767237 5067.549828545587 0.9540159166263139 0.9476321465276177 0.9593405189960138 1.0385421688644128 0.9838690180542171 0.9206960170850018 0.9715972123098239 0.8540702074900062 0.8981078033057597 0.984070271529719 1.0 12.307072654253064 -7.24448024642621 23.777041531099517 0.9423062119017863 0.9775396770575895 0.15416625993786215 0.044392124138520735 866.3765288013659 1214675.4961528275 0.007772615757671562 0.013437210434046111 5.695341283911595e-08 7.24448024642621 0.03523346515580317 S(ph)GRSPTGNTPPVIDSVSEK ddPTM_A549_PD325901_60min_R1 2 SGRSPTGNTPPVIDSVSEK 19 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.681)GRS(0.309)PT(0.01)GNTPPVIDSVSEK;S(0.415)GRS(0.415)PT(0.116)GNT(0.053)PPVIDSVSEK 141.29 4.4365e-21 119344000.0 5580.6 6273.2 6259.5 6250.2 7051.5 6775.299999999999 5551.6 6150.7 6395.3 6248.9 7139.8 True False 6147.138403779412 6801.864579797312 6684.307311431289 6636.260658765892 6556.226966354373 6720.124203143554 5762.869175952088 6028.019463369196 6126.527781254825 5854.343387556053 6261.649862921242 0.9817122544938329 1.0862735427087653 1.0674993744081476 1.0598262125870264 1.047044646360297 1.0732194150518055 0.9203435679272463 0.9626886835472065 0.978420690293376 0.9349522115924942 1.0 12.612327123200942 -7.73724644406588 24.99957632998677 0.9823490312981267 1.0548804723686545 0.6053867375559179 0.03532343401791013 133.42837607402524 137876.89430732524 0.004899382808515877 0.007264929025103843 1.8312749550566564e-08 7.73724644406588 0.07253144107052778 S(ph)GRSSDITSDLGNVLTSTPNAK ddPTM_A549_MK2206_60min_R1 2 SGRSSDITSDLGNVLTSTPNAK 22 1 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 S(0.306)GRS(0.306)S(0.306)DIT(0.042)S(0.042)DLGNVLTSTPNAK;S(0.291)GRS(0.291)S(0.291)DIT(0.064)S(0.064)DLGNVLTSTPNAK 83.881 1.3912999999999999e-05 3724000.0 1493.38 2137.3 1674.9 2206.52 2433.7 2135.8 2028.6100000000001 1957.85 2979.0 2501.8 3092.8 True False 1745.4260343644335 2246.079440853596 1912.4260052825489 2747.1174990544455 2075.7059539028946 2361.8089383707024 2397.1821782468364 2235.3812331641593 2304.2612564854685 1936.6416424244396 2324.7724030624017 0.75079437112433 0.9661502510503205 0.8226293476141265 1.1816715887695899 0.8928641578713623 1.015931252134408 1.031147038346227 0.9615484209204789 0.9911771377921064 0.8330456950853852 1.0 11.182873766884619 -4.463614316314264 0.9439707129747172 0.9972118381948945 5.670786320194034e-19 0.28497664562469727 0.09608845855255985 4.937514642741805 1.11703110337591 0.010666552139286306 7.247580890325813 3.438631867533353e-05 4.463614316314264 -0.9972118381948945 S(ph)GRSSDITSDLGNVLTSTPNAK ddPTM_A549_PD325901_60min_R1 2 SGRSSDITSDLGNVLTSTPNAK 22 1 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 S(0.353)GRS(0.307)S(0.307)DIT(0.017)S(0.017)DLGNVLTSTPNAK;S(0.293)GRS(0.293)S(0.293)DIT(0.061)S(0.061)DLGNVLTSTPNAK 97.441 1.4161e-07 6360200.0 2904.7 3113.3 3352.0 3015.8 3748.0 3625.6 3444.0 3259.9 3863.9 3470.0 3393.2 True False 3199.5830056728782 3375.668717127299 3579.4868772134655 3202.079116621258 3484.7534098980627 3596.0743156638487 3575.063304629112 3194.878737157921 3701.513720074198 3250.903607806097 2975.8579112670327 1.07518003247359 1.1343514434430906 1.2028419984909244 1.0760188194798275 1.1710079962837867 1.2084160006593683 1.2013555119998842 1.0735992216098906 1.2438475997324088 1.0924256818505014 1.0 11.539089928176512 -11.009818374794564 1.2800630004935052 0.9996201946767099 1.1634278405756826 0.26156121973280666 0.06261442884945612 0.2978140658995277 0.8655093195368369 0.04245707678674731 0.00953937052870611 9.77645994351747e-12 11.009818374794564 0.16380764589897268 S(ph)GS(ph)IKGSR ddPTM_A549_MK2206_60min_R1 3 SGSIKGSR 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2;H7C1N1 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 2 S(1)GS(1)IKGSR;S(1)GS(0.879)IKGS(0.121)R;S(1)GS(1)IKGSR 80.014 0.0011604 114835000.0 10431.599999999999 9228.3 6984.7 6192.799999999999 20054.6 9369.5 7143.9 9309.8 18460.8 16422.5 15659.5 True False 12192.199051866251 9697.981052743758 7975.235488146764 7710.036278005351 17104.59490616798 10360.974271029263 8441.854157860587 10629.492660066751 14279.458275839854 12712.645844078399 11770.813969786503 1.0357991455103586 0.8239006306307005 0.6775432445553651 0.6550130091084257 1.4531361170155523 0.8802258108592969 0.7171852498501176 0.9030380301099558 1.2131241146527825 1.0800141669649528 1.0 13.522926467943718 -8.686361645948754 8.612566783556082 1.100521113101658 0.8875718327512022 0.15494019952824745 0.21245856125107804 0.3791708114014763 39.37391288931717 0.03720450101691134 0.042162996796658796 2.0589146985993294e-09 8.686361645948754 -0.21294928035045568 S(ph)GS(ph)IKGSR ddPTM_A549_PD325901_60min_R1 2 SGSIKGSR 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2;H7C1N1 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 2 S(1)GS(1)IKGSR;S(1)GS(0.999)IKGS(0.001)R 87.667 0.00078714 95480000.0 14535.7 14859.9 13271.5 11271.8 15941.4 13520.400000000001 9994.9 12018.7 13782.5 16896.7 20005.1 True False 16011.353563383227 16112.195923823589 14172.183798012682 11968.033485884844 14821.731058844445 13410.294345074335 10375.261388919145 11778.97760001224 13203.269454934809 15829.839478391143 17544.599522777353 0.9126086658516438 0.918356437997109 0.8077804101264086 0.6821491405573147 0.844803042645805 0.7643545426992712 0.5913649596532208 0.6713734095053085 0.7525546215970109 0.9022627993212375 1.0 14.0987393963635 -10.592816571084636 0.9621482179740252 0.995097829024254 0.7695744115205918 0.31508996478803986 0.09871131018703398 0.4252545026414712 0.7243248298421521 0.06247621066101943 0.01870202436686019 2.5537796910533494e-11 10.592816571084636 -0.22552341750366223 S(ph)GS(ph)SPGLR ddPTM_A549_MK2206_60min_R1 1 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.99)GS(0.725)S(0.285)PGLR 83.647 0.0038137 23006000.0 2576.7 2159.1 2040.7 1625.5 2165.2 1966.0 1568.3 1982.8 2728.4 2901.3 2962.8 True False 3011.5839657333295 2268.9889677382685 2330.1019457759257 2023.7475729714668 1846.7019482230967 2174.0408150748194 1853.2398095959854 2263.8679720703285 2110.4217563595016 2245.8943149596394 2227.0549908798785 1.352271936735381 1.0188293405551798 1.0462705031164654 0.9087101940719983 0.829212550110175 0.9761953898659171 0.8321482034279702 1.0165298932182656 0.9476289382175082 1.0084592990100876 1.0 11.120921466537322 -4.8271881876084315 1.3877565317370475 0.9556963872848249 2.0446229784785954 0.7478505723818877 0.0669520734704355 1.343757843007118 1.0053863447560085 0.009445286193418405 2.746893147367561 1.4887158505788152e-05 4.8271881876084315 1.0889265911937707 S(ph)GS(ph)SPGLR ddPTM_A549_PD325901_60min_R1 1 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.615)GS(0.775)S(0.61)PGLR 76.282 0.0053926 43561000.0 4134.0 3106.3 3601.9 3340.6 3812.4 3029.8 2995.1 3167.2 3055.3 3962.4 4741.5 True False 4553.680636710048 3368.0788025607994 3846.3465939842417 3546.941274946938 3544.6301760660044 3005.126313326987 3109.080169481608 3104.027711379665 2926.8963660919526 3712.213387772587 4158.325558844934 1.0950755471812872 0.8099603445903253 0.9249748581620553 0.8529734444198205 0.8524176680987439 0.7226770176603794 0.7476759877226216 0.7464609654665608 0.7038641695252361 0.8927183153989837 1.0 12.021786997101929 S(ph)GSDAGEARPPTPASPR ddPTM_A549_MK2206_60min_R1 3 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 S(0.5)GS(0.5)DAGEARPPTPASPR;S(0.5)GS(0.5)DAGEARPPTPASPR;S(0.499)GS(0.499)DAGEARPPT(0.001)PAS(0.001)PR 62.376999999999995 0.0026357 58049400.0 2018.23 2515.31 2081.42 1865.44 2683.2 2570.1 1892.35 1886.59 3507.34 3135.2200000000003 3138.76 True False 2358.8578830139236 2643.3285352423436 2376.5966540779777 2322.472883742784 2288.5048344135457 2842.0662761056947 2236.165500024845 2154.0199099395604 2712.9330900710793 2426.9716244951437 2359.31926663093 0.9998044420593973 1.1203776329165378 1.0073230391882144 0.9843826211190305 0.9699852270021487 1.2046128373986957 0.9478011440215353 0.9129836476160627 1.1498795980864023 1.0286745243939877 1.0 11.204154944112256 S(ph)GSDRLPSR ddPTM_A549_MK2206_60min_R1 2 SGSDRLPSR 9 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.5)GS(0.5)DRLPSR;S(0.5)GS(0.5)DRLPSR 51.841 0.0070266999999999994 7875700.0 931.06 798.65 1150.51 817.89 1438.0500000000002 1168.55 674.02 880.34 1582.58 1521.5300000000002 1235.87 True False 1088.200165768492 839.2978736900411 1313.6696180892138 1018.2730867164778 1226.5147499733164 1292.205185379288 796.4807093438034 1005.1308909281797 1224.1281568609506 1177.8153162515223 928.969370723206 1.1714058612301979 0.9034720628481483 1.4141151037805664 1.096132034927856 1.3202962214119829 1.391009462855919 0.857381022932694 1.0819849637730055 1.3177271451995909 1.267873143475752 1.0 9.859487219715046 -11.119730573429736 1.4794917543151456 1.0002270110501696 1.18864661326364 0.0 0.19167001104045353 0.6815187957533303 2.67480011796116 0.12502458880720216 0.027166971817091982 7.590483255743405e-12 11.119730573429736 0.18841960221347032 S(ph)GSDRLPSR ddPTM_A549_PD325901_60min_R1 1 SGSDRLPSR 9 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.5)GS(0.5)DRLPSR 59.57 0.005679200000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)GSDRNSAILSDPSVFSPLNK ddPTM_A549_MK2206_60min_R1 2 SGSDRNSAILSDPSVFSPLNK 21 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ISN4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.319)GS(0.319)DRNS(0.319)AILS(0.042)DPS(0.001)VFSPLNK;S(0.314)GS(0.314)DRNS(0.314)AILS(0.046)DPS(0.012)VFSPLNK 57.278 0.0013693 1994270.0 1310.95 2177.58 1411.23 1463.83 2439.8 1689.21 1401.31 2274.8 2960.5 2738.4 1930.9299999999998 True False 1532.206310349713 2288.4095208038057 1611.3636345064726 1822.4684157138256 2080.9086519835155 1867.9610809931519 1655.9098881495565 2597.259866282827 2289.951476947041 2119.7935380986023 1451.4267900430953 1.055655249621112 1.5766620380045893 1.11019284304283 1.2556392290786595 1.4336986655191406 1.2869826392950132 1.1408841971977035 1.7894528915273156 1.577724410667002 1.4604894663930394 1.0 10.503256088934307 -11.006500601478402 1.335989111247157 1.0033228546618058 1.3842681598225357 0.0 0.2529643791400231 0.4411218377045165 1.421501573421216 0.14801519832062793 0.03493577245976131 9.851432784237815e-12 11.006500601478402 0.3809453051607299 S(ph)GSEEAVTDPGER ddPTM_A549_PD325901_60min_R1 2 SGSEEAVTDPGER 13 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 S(0.488)GS(0.488)EEAVT(0.023)DPGER;S(0.568)GS(0.43)EEAVT(0.002)DPGER 62.693999999999996 0.006906399999999999 18859600.0 1241.63 856.0699999999999 810.38 1017.52 662.15 645.19 736.6099999999999 817.01 987.72 804.27 1003.5799999999999 True False 1367.6793635603049 928.2140232779263 865.3772600108141 1080.369899444413 615.6428682934907 639.9357865520626 764.6420966384583 800.714094618054 946.209563288824 753.4882549424228 880.1460222177793 1.5539232457292098 1.0546136661948728 0.983220100035502 1.2274893849115087 0.6994781010794124 0.7270791100544448 0.8687673151231475 0.9097514212476085 1.075059750772467 0.856094597852972 1.0 9.781599086312228 -5.243413020744962 3.03670356888846 0.9839596407250034 1.6589872423654426 0.5675093091623225 0.1507723682661403 0.24931874271554355 3.257223202775926 0.02150840963133603 0.4124112240400134 5.709354100310474e-06 5.243413020744962 0.6750276016404392 S(ph)GSESSVDQK ddPTM_A549_MK2206_60min_R1 2 SGSESSVDQK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.766)GS(0.064)ES(0.085)S(0.085)VDQK;S(0.479)GS(0.479)ES(0.02)S(0.023)VDQK 59.245 0.009581999999999999 2174990.0 2107.44 2020.9699999999998 1470.95 1298.2600000000002 1528.49 1153.9299999999998 890.6700000000001 917.55 1295.5500000000002 2640.6 2664.0 True False 2463.124350038827 2123.828740739201 1679.5528285093822 1616.333758281106 1303.6511457784588 1276.0381066832583 1052.4932099807797 1047.6155223790252 1002.1099935682272 2044.0866260236521 2002.4552773403502 1.2300521154761241 1.0606123216694547 0.8387467363266933 0.8071759587199926 0.6510263477694048 0.6372367568568547 0.5256013564401275 0.5231655029871439 0.5004406365066111 1.0207901515476523 1.0 10.967554306632007 -5.6493702187043 1.295472657893008 0.7077576329004039 1.296452204257428 0.5143141939069815 0.16724757909566682 0.5740868353073484 1.2925335347173037 0.030239297636651254 0.3693980370398073 2.2419699191112922e-06 5.6493702187043 0.5886945713570241 S(ph)GSFDSRDR ddPTM_A549_PD325901_60min_R1 1 SGSFDSRDR 9 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.541)GS(0.456)FDS(0.003)RDR 48.74100000000001 0.008836 18411000.0 480.63 542.98 511.13 529.15 724.64 714.23 592.85 642.02 699.56 637.27 1138.3 True False 529.4232037788947 588.7388301884754 545.8183554743792 561.8343937131569 673.743786272287 708.4135476822017 615.4112311699678 629.214407445053 670.1599259854307 597.0326634428214 998.2963162782216 0.5303267127666595 0.5897435667030909 0.5467498442839707 0.562793215352881 0.6748935914980548 0.7096225200181641 0.61646148656974 0.6302882192241739 0.6713036150267228 0.5980515541403947 1.0 9.963324292485595 -14.157404067011273 0.18066824772635312 2.1956450532722136 0.5256064358165605 0.0 0.13063280626542187 7.097936858812713 0.10352227022896672 3.058365247329576 0.05388269153600444 6.9597867514485845e-15 14.157404067011273 -1.6700386174556532 S(ph)GSGGGSAKEPQEER ddPTM_A549_MK2206_60min_R1 3 SGSGGGSAKEPQEER 15 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 S(0.979)GS(0.02)GGGS(0.001)AKEPQEER;S(0.494)GS(0.494)GGGS(0.012)AKEPQEER;S(0.497)GS(0.497)GGGS(0.005)AKEPQEER 53.553999999999995 0.0048952 256999000.0 1891.32 2293.89 2001.35 2243.15 2534.37 1744.25 1973.23 1360.18 3184.79 3314.82 3377.1000000000004 True False 2210.528577665525 2410.6392030036295 2285.1715240744093 2792.7218506988283 2161.5675302596387 1928.825377260556 2331.7403490971674 1552.9896803765487 2463.4401500645718 2565.9998597575277 2538.47286678157 0.8708104020304804 0.9496415086996712 0.9002150678772819 1.1001582436607293 0.8515228027629878 0.7598369092304059 0.918560280714558 0.6117810833036492 0.9704417889594664 1.0108439185370763 1.0 11.309745124139164 -8.969250921505763 24.999930101725194 0.9869598428346175 0.8734292952094039 0.18937987209237594 0.11384154289388025 238.157543132101 193630.75069112488 0.019799015986147958 0.020872014034590925 1.0733690747218987e-09 8.969250921505763 -0.11353054762521353 S(ph)GSGGGSAKEPQEER ddPTM_A549_PD325901_60min_R1 2 SGSGGGSAKEPQEER 15 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 S(0.919)GS(0.081)GGGSAKEPQEER;S(0.747)GS(0.121)GGGS(0.132)AKEPQEER 105.92 1.3713e-06 660050000.0 4117.799999999999 4864.3 5324.9 5345.1 5919.4 6102.1 6045.1 5957.3 5296.8 6043.8 6150.2 True False 4535.836024635857 5274.231632262334 5686.279735224933 5675.254687397137 5503.641764821397 6052.406520744807 6275.14958850565 5838.476978088555 5074.1939161181745 5662.193436558641 5393.764389329987 0.8409407043453186 0.9778387136627409 1.0542321326592616 1.0521880968000747 1.0203711856062476 1.1221117727570291 1.1634081757295944 1.082449390937117 0.9407518663877882 1.0497665503817082 1.0 12.397076787739278 -3.111560191310317 15.188074689565347 1.0050980303432966 1.0204186300832188 0.0 0.08710226388295156 0.0 0.0 0.012256581635130022 0.0 0.0007734634727011648 3.111560191310317 0.01532059973992217 S(ph)GSGLVGR ddPTM_A549_MK2206_60min_R1 1 SGSGLVGR 8 0 P10909-4;P10909-6;P10909;P10909-5;P10909-2;E5RJZ5;E7ERK6;E7ETB4;H0YLK8 P10909-4 CLU Clusterin;Clusterin beta chain;Clusterin alpha chain 1 S(0.5)GS(0.5)GLVGR 67.494 0.007982600000000001 10197000.0 2224.1 2968.0 2268.3 1978.0 3709.9 2395.5 1911.1 3136.4 3257.2 3544.5 3613.1 True False 2599.4737059756653 3119.0585226470175 2589.9790481714776 2462.6100887957928 3164.1786244748128 2648.9902199957937 2258.322132320915 3580.9943048221594 2519.449400679581 2743.79498823784 2715.867553512923 0.9571430324771528 1.148457522758271 0.9536470380602282 0.9067489633691648 1.1650710360974739 0.9753753332224817 0.8315288164180975 1.3185452656519319 0.9276775656532738 1.010283062106174 1.0 11.40719740910877 S(ph)GSGNFGGGR ddPTM_A549_PD325901_60min_R1 1 SGSGNFGGGR 10 0 F8W6I7;P09651-2;P09651;H0YH80;F8VZ49;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.923)GS(0.077)GNFGGGR 75.941 0.0015084000000000002 53011000.0 13151.0 13358.0 14841.0 13849.0 16569.0 15225.0 15471.0 16068.0 16278.0 17346.0 17665.0 True False 14486.079838745485 14483.725539905081 15848.199506182891 14704.42127663896 15405.2505999469 15101.01264783267 16059.757371056046 15747.511134897855 15593.892268269828 16250.770599713123 15492.316987661237 0.9350492796063259 0.9348973140325335 1.0229715489816722 0.9491428098424662 0.9943800279981567 0.9747420388996546 1.0366272123044438 1.016472303493394 1.0065564938213885 1.0489567578985088 1.0 13.919265305254289 -4.208670436631818 0.4851309385216976 1.0052798512989571 0.7450677762071576 0.47485898494146084 0.027384762141401717 6.0809129296010695 0.448920702189722 0.004317214974984313 1.1403539253759005 6.184855584488025e-05 4.208670436631818 -0.26021207509179956 S(ph)GSGSESTGAEER ddPTM_A549_MK2206_60min_R1 2 SGSGSESTGAEER 13 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.443)GS(0.443)GS(0.045)ES(0.062)T(0.007)GAEER;S(0.454)GS(0.454)GS(0.08)ES(0.011)T(0.001)GAEER 55.261 0.018141 105614000.0 325.4 438.33 429.14 425.64 585.84 298.455 217.553 335.90299999999996 387.79999999999995 726.38 753.23 True False 380.3195647338166 460.6391247411952 489.99850492981824 529.9218191077059 499.6637120575555 330.0373100016048 257.0795640483553 383.51827890979416 299.9639191893469 562.2902535071802 566.182202909562 0.6717264562174277 0.8135881388959422 0.8654431425286027 0.935956334170313 0.8825139848794723 0.5829171392275689 0.4540580094662908 0.6773760760033193 0.5298010386901212 0.9931259771459057 1.0 9.14512259077103 -5.23019627889327 20.441814402575854 0.7589100118407638 0.6717250575625017 0.02001173777334353 0.18014912950051043 4553.380427233761 2978601.6863801563 0.028806864302428587 3.0841605342732628 5.8857758826942155e-06 5.23019627889327 -0.08718495427826212 S(ph)GSGSIDDDR ddPTM_A549_MK2206_60min_R1 1 SGSGSIDDDR 10 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9IYH5;B8ZZD2;A0A1U8QZH8;C9J1A6;C9J7G1;C9JZC0;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.498)GS(0.498)GS(0.005)IDDDR 72.006 0.0023477 3708500.0 161.44 271.84 100.83 113.8 183.55 134.11 103.37 154.31 133.17 329.36 236.93 True False 188.68712517095065 285.6754948774818 115.12921016934705 141.68100510867617 156.55003814721476 148.3014311849868 122.15099095704718 176.18391505455546 103.0072076287915 254.9573472495457 178.09374206465816 1.0594820625558337 1.6040737398496874 0.6464528670948393 0.7955417381102471 0.8790316623836125 0.8327155657785266 0.6858803096669137 0.9892762823220969 0.5783875751871956 1.431590713372633 1.0 7.476493013059276 -5.7692599915112535 24.997586247840616 0.8013352756290946 1.3317779373000793 0.2983651791913401 0.25484059949896465 83.36907227612868 266482.27303021285 0.025493655565798603 0.08140084098726356 1.7011398117686405e-06 5.7692599915112535 0.5304426616709847 S(ph)GSGSIDDDR ddPTM_A549_PD325901_60min_R1 2 SGSGSIDDDR 10 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9IYH5;B8ZZD2;A0A1U8QZH8;C9J1A6;C9J7G1;C9JZC0;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.606)GS(0.38)GS(0.014)IDDDR;S(0.563)GS(0.437)GSIDDDR 81.865 0.0010878 9989300.0 748.6099999999999 709.2 499.52 614.61 775.23 473.699 368.86 497.5 636.74 894.63 742.25 True False 824.6083361024452 768.9667729376163 533.4204310577771 652.5730638194146 720.7805191983124 469.84135239840305 382.8971691479367 487.57697221880017 609.9800321229964 838.1429091214893 650.9579555104198 1.266761284844987 1.1812848532355138 0.8194391458654487 1.002481125386552 1.1072612495121046 0.7217691226002421 0.588205683495649 0.7490145378690216 0.9370498155210464 1.2875530624159848 1.0 9.34642055446293 -5.651953542882436 5.3478344850984705 0.9169325560594438 1.2445637295077547 0.30096299669828375 0.1842683436333868 0.16226862353721863 6.833685516707898 0.022285677575083637 0.09065934726327454 2.228673540996254e-06 5.651953542882436 0.32763117344831094 S(ph)GSIKGS(ph)R ddPTM_A549_PD325901_60min_R1 1 SGSIKGSR 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2;H7C1N1 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 2 S(0.993)GS(0.481)IKGS(0.527)R 51.567 0.041516000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)GSKSTQTVAK ddPTM_A549_MK2206_60min_R1 1 SGSKSTQTVAK 11 1 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.492)GS(0.492)KS(0.014)T(0.003)QTVAK 61.211999999999996 0.0022050999999999998 6337200.0 2306.4 2296.3 1933.9 1436.5 1990.9 1676.0 1835.0 1808.0 2871.0 3318.7 3291.3 True False 2695.663933933849 2413.1718617096863 2208.1560998363625 1788.4425644869361 1698.0412473292824 1853.3532075612402 2168.395747375269 2064.289536767781 2220.723084044908 2569.0033650627497 2473.9793747411013 1.0896064702301516 0.9754211722004439 0.8925523480030804 0.722901161887857 0.6863603086856697 0.7491385039356648 0.8764809316982235 0.8344004634168812 0.8976320121008703 1.038409370462756 1.0 11.272617757457063 -9.699557119411123 0.8520525526548274 0.9856521760962192 0.8469238366617744 0.22998061872961417 0.11029147667049594 0.666193086674756 1.015941958053355 0.04197886711239124 0.024936076721879002 1.99729806192318e-10 9.699557119411123 -0.13872833943444485 S(ph)GSLDDSFSDFQELPASSK ddPTM_A549_MK2206_60min_R1 2 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.5)GS(0.5)LDDSFSDFQELPASSK;S(0.496)GS(0.496)LDDS(0.004)FS(0.004)DFQELPASSK 93.75399999999999 3.4119e-06 2033800.0 820.15 526.91 679.55 488.04 1162.4 935.54 866.15 1237.7 1651.7 1548.0 1400.6 True False 958.5712692576509 553.7274683854247 775.920408316769 607.6098219089478 991.4124998219695 1034.538221838808 1023.5182433728011 1413.1477652972799 1277.5925872229107 1198.305724867308 1052.792365406492 0.9105036289729727 0.525960755966943 0.7370118114574088 0.5771411741519843 0.9416980331531724 0.9826612120609025 0.972193831380618 1.3422853467897742 1.213527594996969 1.138216579301116 1.0 10.040005216813181 -7.169334908729466 1.497253364037785 1.1155841187821958 0.6793468072531419 0.6743886082138105 0.13629635045339067 0.1843828338602732 0.8091868089439654 0.022561454647234847 0.04618233311371503 6.771191418378428e-08 7.169334908729466 -0.4362373115290539 S(ph)GSLDDSFSDFQELPASSK ddPTM_A549_PD325901_60min_R1 2 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.486)GS(0.407)LDDS(0.054)FS(0.054)DFQELPASSK;S(0.52)GS(0.448)LDDS(0.016)FS(0.016)DFQELPASSK 92.977 3.8213999999999995e-06 4559600.0 2046.9699999999998 2230.44 2904.4 2851.3 2882.2 2859.5 2649.8 2403.5 3140.6 3103.4 2930.4 True False 2254.7768875003317 2418.4070065298597 3101.510049576012 3027.4183252278644 2679.764215050213 2836.213180064202 2750.6395890261965 2355.5603069907256 3008.6115037306945 2907.450794370442 2569.979377336119 0.877352132621972 0.9410219505483466 1.2068229328714866 1.1779932368040626 1.0427181784734358 1.1035937506253628 1.070296366298993 0.9165677856264953 1.1706753487061965 1.131312889126809 1.0 11.327541067297473 -5.580793510507294 8.037978806920462 1.0822296321865121 0.8929190225236068 0.4355382285381294 0.0806530963026215 0.16390602590326392 19.905826256531935 0.0120544992313936 0.0472756469966525 2.625466550021127e-06 5.580793510507294 -0.18931060966290536 S(ph)GSLKGPDDPR ddPTM_A549_MK2206_60min_R1 1 SGSLKGPDDPR 11 1 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 1 S(0.518)GS(0.482)LKGPDDPR 46.3 0.0099697 49505000.0 7976.1 8795.4 8720.8 6921.1 11247.0 8831.6 8249.9 9826.2 12637.0 11833.0 13096.0 True False 9322.27068307743 9243.048291809166 9957.540573686814 8616.769810699989 9592.581198810813 9766.154050058383 9748.800041564707 11219.093941475427 9774.739677142283 9159.917081624588 9843.901768787247 0.9470097225712074 0.9389618576971938 1.0115440815612249 0.8753408976531833 0.9744694150876927 0.9921019408203173 0.9903390211060328 1.139699908124703 0.9929741180611674 0.9305169125791749 1.0 13.265014546034898 -7.23369034691707 2.746606439990045 1.008365530589039 0.9463673208034795 0.2253625731615141 0.055354234758233666 0.3082802751015977 4.621415666569099 0.0075584762451873875 0.013449278908006707 5.8386125047317796e-08 7.23369034691707 -0.06199820978555959 S(ph)GSPAPETTNESVPFAQHSSLDSR ddPTM_A549_MK2206_60min_R1 1 SGSPAPETTNESVPFAQHSSLDSR 24 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 S(0.31)GS(0.295)PAPET(0.187)T(0.187)NES(0.022)VPFAQHSSLDSR 40.986000000000004 0.026264 4110700.0 1940.2 3135.5 1091.4 2693.3 2274.6 2189.9 1196.9 1466.3 3613.0 2159.3 2235.8 True False 2267.6583266642624 3295.083557196674 1246.1769312588058 3353.1586209068328 1940.0093531444002 2421.6337644620266 1414.3612370754543 1674.152515355418 2794.661268775427 1671.5126303010197 1680.5891550591436 1.349323432105843 1.9606716771183215 0.7415119438962166 1.99522804893313 1.1543626515167693 1.4409433484513972 0.841586554820818 0.9961700099727829 1.6629056901638024 0.994599200684593 1.0 10.71475136414222 S(ph)GSPKLDPSEVYLK ddPTM_A549_MK2206_60min_R1 2 SGSPKLDPSEVYLK 14 1 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 S(0.547)GS(0.453)PKLDPSEVYLK;S(0.546)GS(0.454)PKLDPSEVYLK 101.15 8.3883e-06 13633800.0 4858.8 6291.4 5691.4 4999.7 6476.700000000001 4943.0 5034.1 4774.4 7603.900000000001 7721.7 8014.200000000001 True False 5678.846653745138 6611.605387257903 6498.526100940411 6224.6267244450655 5523.986009632614 5466.064979102154 5948.730807554138 5451.185820986777 5881.628790933152 5977.362607046441 6024.052959332221 0.9426953401775289 1.0975344061368966 1.0787631092905907 1.0332954850275882 0.9169882879391152 0.9073733275592052 0.9874964326697366 0.9049033695067403 0.9763574176122687 0.9922493456480244 1.0 12.55651873791066 -6.595442698055059 9.020154255835113 0.971666275089984 1.0472008230727994 0.3597441167643194 0.050029603312712924 0.2706558056885346 30.898047400102758 0.007240009619955801 0.015092861132519174 2.538383884849856e-07 6.595442698055059 0.07553454798281534 S(ph)GSPKLDPSEVYLK ddPTM_A549_PD325901_60min_R1 1 SGSPKLDPSEVYLK 14 1 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 S(0.5)GS(0.5)PKLDPSEVYLK 77.078 0.00020518 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)GSPLEKDSDGLR ddPTM_A549_PD325901_60min_R1 1 SGSPLEKDSDGLR 13 1 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.896)GS(0.104)PLEKDSDGLR 140.81 7.8257e-13 70175000.0 7139.8 7156.4 6680.6 7862.3 7635.0 9289.2 8766.5 8541.1 8139.8 7649.8 8339.7 True False 7864.627239957039 7759.4949433879865 7133.985689711301 8347.936414421154 7098.743939320092 9213.55183502445 9100.113954712868 8370.741060136672 7797.712512916993 7166.790322476963 7313.969769714044 1.0752884531356937 1.0609142760637034 0.9753917385948152 1.1413687337058185 0.9705733223993943 1.259719704226324 1.2442099490751186 1.1444866910441094 1.0661395601067492 0.9798769407215044 1.0 12.836438948369839 -9.495080507853338 1.4054540393391441 1.0168308056187547 1.106863950177632 0.190124340219322 0.08874828918068285 0.5153641609663789 2.0860031582651426 0.02238227325555458 0.017700646984070024 3.1983021656868056e-10 9.495080507853338 0.09003314455887734 S(ph)GSPS(ph)DNSGAEEMEVSLAKPK ddPTM_A549_PD325901_60min_R1 1 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 2 S(0.526)GS(0.481)PS(0.564)DNS(0.429)GAEEMEVS(0.001)LAKPK 65.521 0.00075062 7058400.0 2785.6 3568.1 3107.5 4041.3 3721.1 4080.8 3019.4 4033.4 3711.3 3143.5 3496.8 True False 3068.3920613496643 3868.796309248039 3318.3936369155267 4290.921922541777 3459.7427730981035 4047.5673177849285 3134.3049192790772 3952.950672858911 3555.326967393404 2945.0188735269353 3066.715768041543 1.0005466086311585 1.261543814906172 1.0820675562752624 1.3991912674978788 1.1281589279164121 1.3198377756311515 1.0220395877380895 1.2889850158442733 1.1593271878808307 0.9603168654288671 1.0 11.582478744374582 -10.251342706255086 0.6622253843743043 0.9967029769969923 1.193270152220887 0.29193305342053233 0.12034545699735959 0.7398082489713393 0.5972456022928174 0.07500008275840807 0.023112786418723028 5.6060542192277294e-11 10.251342706255086 0.19656717522389477 S(ph)GSPVATFK ddPTM_A549_PD325901_60min_R1 1 SGSPVATFK 9 0 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 S(0.497)GS(0.497)PVAT(0.006)FK 107.51 0.00048248 25353000.0 11348.0 11614.0 11590.0 11396.0 14111.0 13144.0 12838.0 13073.0 13654.0 12590.0 14283.0 True False 12500.040606043938 12592.752539336541 12376.567096331755 12099.905037806171 13119.892040307257 13036.959621879305 13326.557115223148 12812.248759429896 13080.169863064022 11795.065251377153 12526.281547396862 0.9979051292074481 1.0053065222658588 0.9880479733352138 0.9659614461021516 1.0473892025070883 1.0407685291560902 1.063887719974855 1.0228293776529764 1.0442180956552318 0.9416254302401764 1.0 13.612670590753769 -6.765963874695416 24.9999998298781 1.0278468427174425 0.9903584077797448 0.19446519521736916 0.03195386263711517 94.01261874845133 519469.58188869397 0.003387460925033003 0.006557449507299894 1.7140998831284628e-07 6.765963874695416 -0.03748843493769771 S(ph)GSRDSTPSRPAQQPLSR ddPTM_A549_MK2206_60min_R1 2 SGSRDSTPSRPAQQPLSR 18 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.409)GS(0.409)RDS(0.08)T(0.099)PS(0.003)RPAQQPLSR;S(0.498)GS(0.498)RDS(0.002)T(0.002)PSRPAQQPLSR 84.762 1.9275e-05 19302000.0 1305.68 1248.9299999999998 1135.1100000000001 1029.04 1630.08 1126.5900000000001 1077.77 960.5 1291.8000000000002 1874.25 1567.61 True False 1526.0468631888434 1312.4952023886588 1296.0856665211497 1281.1548461953616 1390.2973913539179 1245.8050060300814 1273.5868581191512 1096.6538164078834 999.2093625807082 1450.855623276843 1178.3291731649808 1.2950938480882181 1.1138612471617835 1.0999351420960546 1.0872639627127214 1.1798887976435248 1.0572639924409757 1.0808413193219253 0.9306854496882919 0.8479883086462516 1.231282103777384 1.0 10.202526905455226 -8.02296473116714 1.8284416967587471 0.9260430780597139 1.1401793224525387 0.13272656726818133 0.11356949275194347 0.16956555619355793 1.132235224821831 0.013030990823960798 0.01824134774289339 9.484954870069486e-09 8.02296473116714 0.21413624439282486 S(ph)GSS(ph)PEVDSK ddPTM_A549_PD325901_60min_R1 1 SGSSPEVDSK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.815)GS(0.321)S(0.86)PEVDS(0.004)K 64.12100000000001 0.007148399999999999 6665100.0 2161.6 2375.3 1891.6 1752.5 2041.3 2196.6 1846.4 2204.9 1819.4 1945.3 2461.7 True False 2381.0440407141846 2575.474867116074 2019.9753511148544 1860.7479447837234 1897.9261301026993 2178.71161788041 1916.6657623888486 2160.9215397894122 1742.9369451339314 1822.4734260130242 2158.9265060020202 1.1028833237697793 1.1929423535057864 0.9356387748722023 0.8618857286761118 0.8791064099802771 1.0091643285787566 0.8877864795583992 1.0009240860130466 0.8073164789484041 0.8441572332112165 1.0 11.07609841675288 -5.799325103992547 7.465833261671362 0.9146176650779271 1.1478025834238113 0.6448360973500922 0.06697969405477525 0.0940992183533241 15.070630980247754 0.010684780273523105 0.034233471334204686 1.5873580398742184e-06 5.799325103992547 0.23318491834588417 S(ph)GSS(ph)PGLR ddPTM_A549_MK2206_60min_R1 1 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.908)GS(0.149)S(0.943)PGLR 95.775 0.0028811 23147000.0 2350.8 2268.0 2229.6 1805.8 2636.3 2164.6 1973.8 2547.3 2652.8 3276.6 3548.2 True False 2747.5575684580685 2383.431512588759 2545.790806243936 2248.2210810654424 2248.5037622854934 2393.6565352548096 2332.4139107189667 2908.3875757790743 2051.9450356511097 2536.413784302469 2667.0840146617993 1.0301728604550442 0.893646956558656 0.9545221643746217 0.8429509789366455 0.8430569678063238 0.8974807400502298 0.874518349589647 1.0904746756347956 0.7693589794588107 0.9510063313937638 1.0 11.381047555980198 -4.072076788502511 1.4569193673020178 0.8979530857468488 4.016159517988013 0.12009398527076831 0.08366407904087655 57.89019715463836 6.18767460463477 0.013831246587705574 542.0384786525783 8.470776273576458e-05 4.072076788502511 3.1182064322411644 S(ph)GSSPKWTHDK ddPTM_A549_MK2206_60min_R1 1 SGSSPKWTHDK 11 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;H0YF14;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.353)GS(0.353)S(0.294)PKWTHDK 69.602 0.00097055 7077400.0 1967.3 2284.0 1537.0 1318.4 2049.6 1469.2 1603.5 1550.1 2816.7 4082.0 3415.2 True False 2299.332144132874 2400.2458442472357 1754.9697116957898 1641.408059185226 1748.1065550887029 1624.6697688239708 1894.8351939598072 1769.8314219821548 2178.721947345627 3159.873364927875 2567.111585275064 0.8956884294869879 0.9349986412803521 0.6836359283181476 0.6393987969203724 0.6809624346350315 0.6328785153489496 0.7381195289011081 0.6894252015120405 0.8487055879622696 1.2309061215152817 1.0 11.325930291921022 -9.443493040408217 0.9737072377165319 0.9698434796933045 0.7337594154244207 0.5171055016959398 0.12398094480553513 0.29601384670203584 0.5916777116511945 0.029742256509611282 0.021926437663480913 3.60169522083907e-10 9.443493040408217 -0.23608406426888384 S(ph)GSSQELDVKPS(ph)ASPQER ddPTM_A549_MK2206_60min_R1 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.48)GS(0.261)S(0.261)QELDVKPS(0.551)AS(0.448)PQER 51.473 0.004672600000000001 19302000.0 2557.7 2729.1 2415.6 2967.6 4295.1 3179.1 2465.4 3077.4 4354.0 3994.2 4576.5 True False 2989.3772302387283 2867.999533071423 2758.1684031049767 3694.662133220626 3663.2964796845654 3515.5102518842104 2913.331267345498 3513.630874142239 3367.8259519092767 3091.907445907625 3440.028745025569 0.8689977473477504 0.8337138278913148 0.8017864406201279 1.0740207152522396 1.0649028689024331 1.0219421151546453 0.8468915475076484 1.021395788980863 0.979010991341075 0.8988027935460299 1.0 11.748204904860557 -6.250844085677679 24.969684019143926 0.9940140944583821 0.8347207781653484 0.5256325431163849 0.06479883138848545 365.7110380042799 861860.7382880748 0.008018498831839029 0.020973670258671383 5.612494317787365e-07 6.250844085677679 -0.15929331629303367 S(ph)GSSQELDVKPSASPQER ddPTM_A549_MK2206_60min_R1 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.502)GS(0.448)S(0.049)QELDVKPSASPQER 58.324 0.00093978 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)GSSVSSR ddPTM_A549_MK2206_60min_R1 1 SGSSVSSR 8 0 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8;F8VPY7 B7Z8L1 PPHLN1 Periphilin-1 1 S(0.864)GS(0.128)S(0.008)VSSR 70.056 0.006776399999999999 4511400.0 886.78 971.91 551.77 466.89 849.24 886.98 690.91 829.12 841.65 831.88 1035.0 True False 1036.4467843105529 1021.376067636747 630.0192829033092 581.2780709594884 724.3179209814258 980.8396348703278 816.4394037161022 946.6502990735084 651.0176188388707 643.9577302342481 777.9809354531772 1.3322264557894574 1.3128548799743933 0.8098132668717908 0.747162358960495 0.9310227127346091 1.2607502191541295 1.0494336898378145 1.2168039805783681 0.8368040772871256 0.8277294479705213 1.0 9.603590991947433 -5.745484340412063 24.51720591595759 0.9552100926407939 1.3225411341353546 0.4381923192317666 0.15612886397826664 135.2795942108593 207871.9259125728 0.022240182919152623 0.08553139483739364 1.7968658695571423e-06 5.745484340412063 0.36733104149456064 S(ph)GSYSYLEER ddPTM_A549_PD325901_60min_R1 1 SGSYSYLEER 10 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;H0YIM2;H0YIS3;A0A0U1RQZ1 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.595)GS(0.291)YS(0.114)YLEER 158.05 1.2645e-08 34594000.0 6118.1 6770.4 6126.5 7287.6 6785.0 6932.3 6701.2 7347.9 7127.9 6996.6 8321.1 True False 6739.205008092828 7340.965368720868 6542.281131637316 7737.738500659549 6308.445006979285 6875.845647196744 6956.217833037343 7201.340370183965 6828.339150939953 6554.833481952777 7297.657451798922 0.9234751086366172 1.0059344957211263 0.8964905758935835 1.060304426696836 0.8644479476663035 0.9421990128492262 0.9532124354949804 0.9868016439177734 0.9356891846515378 0.8982106278963486 1.0 12.833217717827651 -10.925896078105154 1.0464832799672612 1.0015028758662017 0.9518776133054664 0.0 0.05858039558627824 0.966667435404291 1.782813632691504 0.03712856616835537 0.007718995947943579 1.186052523542955e-11 10.925896078105154 -0.049625262560735295 S(ph)GTAT(ph)PQR ddPTM_A549_MK2206_60min_R1 1 SGTATPQR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 2 S(0.986)GT(0.156)AT(0.857)PQR 54.608000000000004 0.034485 4362600.0 198.46 194.46 122.45 161.37 347.23 158.04 181.89 284.98 334.87 386.23 327.62 True False 231.95519611884825 204.35718339418443 139.8152512668506 200.90565724417453 296.1529269727998 174.76368790153842 214.9370585777044 325.3767877146473 259.02247967750554 298.98037475161533 246.2629121479901 0.9419006463281661 0.8298333744684109 0.5677479001906285 0.8158177595310884 1.2025884222258714 0.7096630441717319 0.8727950819023018 1.321257776400834 1.0518127858483524 1.2140698416330957 1.0 7.944055560246282 -7.167738966966136 0.8885390330582315 1.0382544327816425 0.7890977942300714 0.28193546707248274 0.1853075119813536 0.639230452001965 0.9848430370906948 0.030946075205055483 0.08041101674829806 6.796119911951157e-08 7.167738966966136 -0.2491566385515711 S(ph)GTAT(ph)PQR ddPTM_A549_PD325901_60min_R1 2 SGTATPQR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 2 S(0.999)GT(0.018)AT(0.983)PQR;S(0.964)GT(0.203)AT(0.833)PQR 82.831 0.0052848 17843000.0 1556.36 1329.1100000000001 1019.5899999999999 896.14 1434.8700000000001 747.53 996.79 1061.4 1247.61 1652.53 2037.89 True False 1714.3605214683244 1441.1187642119503 1088.7855086927436 951.492532518394 1334.0896812327726 741.4423635227819 1034.7233889144175 1040.2295443478079 1195.1772903806439 1548.1889737774654 1787.2424492490795 0.9592210179366673 0.8063364681257682 0.6091985500625298 0.5323802223465368 0.7464514295714598 0.4148527044186441 0.5789496491363904 0.5820304597089592 0.6687270050478068 0.866244517876098 1.0 10.803519641819012 -10.401179827210001 0.8123186632321057 0.9950825163257095 0.6470670495231906 0.34592160741330524 0.14325281854742222 0.4402946509920136 0.5372955362307699 0.08820770636122263 0.02792750952402244 3.9702711942108845e-11 10.401179827210001 -0.34801546680251894 S(ph)GTATPQR ddPTM_A549_MK2206_60min_R1 2 SGTATPQR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.991)GT(0.009)AT(0.001)PQR;S(0.955)GT(0.038)AT(0.007)PQR 76.572 0.0046281000000000004 102828000.0 2174.02 1874.8899999999999 1273.27 1302.13 1965.15 1474.1100000000001 1630.02 2069.7 2255.8 2518.7 2761.7 True False 2540.941426314113 1970.3138926973286 1453.8388320175009 1621.1519084548377 1676.0790382184646 1630.0993417649765 1926.1735346793655 2363.086313190417 1744.8649017723803 1949.7239206868787 2075.893670957525 1.2240229169069534 0.9491400837445124 0.7003435929099896 0.7809416884570328 0.8074011986583868 0.7852518481898344 0.9278767798308766 1.1383465089040046 0.8405367414447318 0.9392214774601392 1.0 11.019516834181164 -11.038272425884635 1.1463337338595754 1.0042263583026543 0.8920915102943012 0.013908102283819557 0.15043719601014513 1.3934542606294864 3.0464651721300773 0.132319195280829 0.025212173107623005 9.156459400906096e-12 11.038272425884635 -0.11213484800835305 S(ph)GTATPQR ddPTM_A549_PD325901_60min_R1 1 SGTATPQR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.965)GT(0.028)AT(0.007)PQR 54.416000000000004 0.022997999999999998 56066000.0 871.72 900.5 730.65 661.94 1152.9 760.0 459.83 482.49 876.0 932.17 1189.9 True False 960.2163726736536 976.3882953050254 780.2363027553749 702.8265304251862 1071.9242812890818 753.8108119771964 477.32908227863066 472.8663584439171 839.1847663720587 873.3126271148725 1043.5498433975729 0.9201442353221927 0.9356412647489036 0.7476751663486375 0.6734958898915023 1.0271903043932504 0.7223524748208972 0.4574089922955192 0.45313250865369914 0.8041635688812471 0.8368671919604292 1.0 10.027283794700008 -9.961884266020673 1.1827924236538434 0.9690449540961986 0.7476096678937508 0.105054352842192 0.17670813198394386 0.5003579594758857 1.4101854846716002 0.05858138053948559 0.034622038169310455 1.0917312302339622e-10 9.961884266020673 -0.2214352862024478 S(ph)GTFDLLEMDR ddPTM_A549_PD325901_60min_R1 1 SGTFDLLEMDR 11 0 H0YA31;H0YA26;E9PHT6;Q9NVE7 H0YA31 PANK4 Pantothenate kinase 4 1 S(0.5)GT(0.5)FDLLEMDR 73.632 0.0014803 3012100.0 489.3 534.28 497.98 439.37 585.13 325.54 306.21 425.49 527.78 593.88 592.69 True False 538.9733757963779 579.3056506558231 531.7759173970052 466.50888701833105 544.0324873889149 322.88891017244316 317.86298911454134 417.0032681595521 505.5992420043895 556.3823154478049 519.792887371466 1.0369002517943358 1.1144932236093235 1.0230534705585064 0.8974899394591832 1.046633189115045 0.6211876268743421 0.611518542937243 0.8022488923776748 0.9726936521989514 1.0703923215674755 1.0 9.021793082484185 -6.1008027531106785 3.639552011230113 0.9201455497832657 1.0756120481424363 0.18863668562537972 0.15078220446434482 0.38423328242445803 9.289889994034729 0.023394362079327373 0.06919094082217336 7.928613486991799e-07 6.1008027531106785 0.1554664983591706 S(ph)GTFKAQEAEAGVLGNEK ddPTM_A549_PD325901_60min_R1 1 SGTFKAQEAEAGVLGNEK 18 1 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 S(0.546)GT(0.454)FKAQEAEAGVLGNEK 100.23 2.5586e-09 4150900.0 5204.9 4721.7 4624.1 4848.8 5376.1 5151.2 5022.4 5233.7 6103.7 5658.6 5127.8 True False 5733.297616355136 5119.614229807589 4937.919232972192 5148.299363576217 4998.501282538149 5109.250335074916 5213.530180362731 5129.309747741775 5847.182715188512 5301.315030297283 4497.113107802398 1.27488401534931 1.1384223850018724 1.0980197995031533 1.1448009512244697 1.1114911194619173 1.1361178188314793 1.1593059937312593 1.140578327648137 1.300208061265742 1.1788262610294615 1.0 12.134783454640441 -11.115026147782228 1.4807679489511953 1.000501004462481 1.178896836571241 0.0 0.08006035886047429 0.30197459854223146 1.1900010450318343 0.052307352000218486 0.011470719306947501 7.673152898406733e-12 11.115026147782228 0.17839583210875998 S(ph)GTLKSPPKGFDTTAINK ddPTM_A549_MK2206_60min_R1 2 SGTLKSPPKGFDTTAINK 18 2 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E7EUY6;E7EU80;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 S(0.386)GT(0.341)LKS(0.211)PPKGFDT(0.052)T(0.01)AINK;S(0.417)GT(0.365)LKS(0.218)PPKGFDTTAINK 89.365 1.3274e-06 31710000.0 9459.400000000001 10523.5 11077.5 9886.4 13138.8 11199.0 10338.8 10304.2 15511.900000000001 15948.4 15159.2 True False 11055.915459874204 11059.101200497269 12648.456071119128 12308.56844381736 11206.099924863121 12384.07074670545 12217.226132405141 11764.851905289037 11998.479417414212 12345.645363355146 11394.75226736406 0.9702637846317796 0.9705433642617983 1.1100246652440025 1.0801962302480748 0.9834439276893048 1.0868222894301018 1.0721800567263533 1.0324798318770814 1.0529829114213654 1.0834500894516643 1.0 13.476081938945951 -5.615626955572181 24.999999995669285 1.0384653709865403 0.970295484259285 0.3503857475897495 0.0394443571364348 13.399311452563166 3602.9753261431892 0.005472460257301112 0.02119474927844749 2.423109523077972e-06 5.615626955572181 -0.06816988672725532 S(ph)GTNSPPPPFSDWGR ddPTM_A549_MK2206_60min_R1 1 SGTNSPPPPFSDWGR 15 0 D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5 D6RAU6 FBXO4 F-box only protein 4 1 S(0.76)GT(0.023)NS(0.217)PPPPFSDWGR 172.1 2.8332e-27 7903400.0 6728.5 6738.6 5095.8 4721.4 9632.8 7467.5 6792.8 6954.3 10044.0 10525.0 11067.0 True False 7864.106303968911 7081.565957112264 5818.461064970337 5878.143211951703 8215.827880493 8257.705893474678 8026.963832572601 7940.093321650544 7769.050036972152 8147.395190070036 8318.758466338468 0.9453461518074735 0.8512767843624196 0.6994386348052433 0.7066130403638212 0.9876266889750468 0.9926608552092435 0.9649232953515116 0.9544805698806886 0.9339194145868414 0.9794003784384597 1.0 13.022152513976721 -6.776988215818871 24.997521776669192 0.96964786787377 0.7970528017253021 0.6218389071631412 0.06469308959856548 122.0346107359926 196192.22148185884 0.009831581842847235 0.018626356186670207 1.671135958431975e-07 6.776988215818871 -0.17259506614846787 S(ph)GTPPRQGSITSPQANEQSVTPQR ddPTM_A549_MK2206_60min_R1 2 SGTPPRQGSITSPQANEQSVTPQR 24 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.541)GT(0.459)PPRQGS(0.001)ITSPQANEQSVTPQR;S(0.505)GT(0.464)PPRQGS(0.023)IT(0.005)S(0.004)PQANEQSVTPQR 108.72 1.4212000000000001e-11 27896000.0 2989.1 3447.5 2750.0 3321.3999999999996 4139.8 3246.0 2870.9 2842.5 5228.3 4043.7 4951.4 True False 3493.5870035213634 3622.9630245369267 3139.99135144009 4135.143149103311 3530.840903959901 3589.4895654795864 3392.5053684684785 3245.43307979116 4044.098397879483 3130.225361528382 3721.8307283119434 0.9386743402771299 0.9734357333817116 0.843668500975661 1.111050837870541 0.9486839036232401 0.9644419178374668 0.9115152235865299 0.871999109229544 1.086588481070902 0.841044526210388 1.0 11.861796726685103 -8.773262531888165 24.999068535569364 1.0408890032841414 0.9481068219890469 0.0 0.09009355335604743 210.28432913344943 444627.1520439428 0.01184716542185366 0.012661128061010628 1.6855338087816232e-09 8.773262531888165 -0.09278218129509441 S(ph)GTPPRQGSITSPQANEQSVTPQR ddPTM_A549_PD325901_60min_R1 1 SGTPPRQGSITSPQANEQSVTPQR 24 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.527)GT(0.458)PPRQGS(0.008)IT(0.002)S(0.004)PQANEQSVTPQR 83.33200000000001 2.7270999999999997e-06 13637000.0 2591.2 2142.5 2244.8 2377.2 3130.1 2568.9 2277.9 3234.8 2477.7 2906.8 2716.0 True False 2854.25671645938 2323.0559941044035 2397.145627078994 2524.0342449870864 2910.2525742587845 2547.9797301160806 2364.58673101471 3170.2793763484933 2373.570885433846 2723.264151922408 2381.9492181425394 1.1982861325167753 0.975275197477106 1.0063798207034427 1.0596507372039383 1.2217945504850938 1.069703632096327 0.9927108071844752 1.3309601028441318 0.9964825729092466 1.1432922797766563 1.0 11.217926940721007 S(ph)GTPTQDEMMDKPTSSSVDTMSLLSK ddPTM_A549_MK2206_60min_R1 6 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.52)GT(0.465)PT(0.014)QDEMMDKPTSSSVDTMSLLSK;S(0.469)GT(0.43)PT(0.064)QDEMMDKPT(0.008)S(0.009)S(0.009)S(0.009)VDTMSLLSK;S(0.404)GT(0.371)PT(0.086)QDEMMDKPT(0.084)S(0.021)S(0.026)S(0.007)VDT(0.001)MSLLSK;S(0.498)GT(0.462)PT(0.025)QDEMMDKPT(0.003)S(0.003)S(0.003)S(0.003)VDT(0.001)MSLLSK;S(0.356)GT(0.333)PT(0.309)QDEMMDKPTSSSVDTMSLLSK;S(0.33)GT(0.312)PT(0.296)QDEMMDKPT(0.016)S(0.016)S(0.019)S(0.008)VDT(0.002)MS(0.001)LLSK 89.634 3.9646e-09 79895000.0 4881.3099999999995 6261.19 6085.28 5204.35 8283.7 6463.48 5759.169999999999 6827.58 9600.199999999999 9148.11 8944.4 True False 5705.155791428475 6579.857827295247 6948.264207669582 6479.415983632149 7065.178703351034 7147.441163489211 6805.536641096038 7795.410373586819 7425.77002836918 7081.545597361675 6723.258627118261 0.8485700324566917 0.9786709380411744 1.0334667447781587 0.9637314794789281 1.0508563027537923 1.0630918070978277 1.0122378177816793 1.1594690619432717 1.104489718485221 1.053290671996205 1.0 12.714944932206317 -4.040245436227439 0.6675614368436111 1.0558119552225587 1.6430222332691784e-16 0.6244190099460232 0.04718344888406987 7.412327989232978 0.6673952620082567 0.008991774530375227 8.689825959660224 9.11495573169787e-05 4.040245436227439 -1.0558119552225584 S(ph)GTPTQDEMMDKPTSSSVDTMSLLSK ddPTM_A549_PD325901_60min_R1 9 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.48)GT(0.436)PT(0.079)QDEMMDKPT(0.002)S(0.002)SSVDTMSLLSK;S(0.521)GT(0.47)PT(0.008)QDEMMDKPT(0.001)SSSVDTMSLLSK;S(0.392)GT(0.362)PT(0.128)QDEMMDKPT(0.046)S(0.046)S(0.011)S(0.011)VDT(0.003)MS(0.001)LLSK;S(0.503)GT(0.455)PT(0.042)QDEMMDKPTSSSVDTMSLLSK;S(0.404)GT(0.404)PT(0.145)QDEMMDKPT(0.011)S(0.011)S(0.011)S(0.011)VDT(0.003)MS(0.001)LLSK;S(0.451)GT(0.414)PT(0.072)QDEMMDKPT(0.05)S(0.01)S(0.002)S(0.001)VDTMSLLSK;S(0.528)GT(0.463)PT(0.009)QDEMMDKPTSSSVDTMSLLSK;S(0.369)GT(0.332)PT(0.299)QDEMMDKPTSSSVDTMSLLSK;S(0.457)GT(0.398)PT(0.145)QDEMMDKPTSSSVDTMSLLSK 119.75 9.9543e-18 184634900.0 17930.84 16730.35 16825.15 17962.199999999997 22623.600000000002 18842.17 19700.07 19639.5 19672.899999999998 19248.6 20229.2 True False 19751.165676813256 18140.275309668432 17967.005856846106 19071.684298883996 21034.59638318298 18688.725614621544 20449.766944141942 19247.774765610302 18846.116427352583 18033.24011101337 17741.136643464302 1.113297646804915 1.0224979196218056 1.012731383446337 1.0749978810354215 1.1856397256785665 1.0534119650956144 1.1526751275925422 1.0849234269722527 1.0622834830763421 1.0164647549601438 1.0 14.114810823086824 -9.883549308503323 0.8433727769874023 1.0067819121086035 1.0853688992908206 0.26941287445683626 0.04887062301508726 0.5220575284039398 0.7642114348311867 0.019838804980646267 0.010272035473667195 1.307527077758325e-10 9.883549308503323 0.07858698718221713 S(ph)GTQSDKVTLK ddPTM_A549_MK2206_60min_R1 2 SGTQSDKVTLK 11 1 Q00341;A0A024R4E5;Q00341-2;H0Y394;H7C2D1 Q00341 HDLBP Vigilin 1 S(0.523)GT(0.471)QS(0.006)DKVTLK;S(0.628)GT(0.359)QS(0.013)DKVT(0.001)LK 47.201 0.026354000000000002 4370900.0 1397.0 1579.7 1767.6 1553.2 2241.8 1513.8 1453.4 1368.4 2068.2 2447.7 2419.7 True False 1632.7794466292007 1660.0999825557599 2018.2722592020018 1933.7340697257978 1912.0341896945026 1673.9893112208858 1717.463966885676 1562.3748905492434 1599.75600223674 1894.7628699985203 1818.8217096773442 0.897712754329754 0.9127337625908692 1.1096592087412678 1.0631795625910132 1.0512488274805638 0.9203702057844079 0.9442728540942867 0.8590038717024144 0.8795562499199187 1.041752943632198 1.0 10.828788414143586 -7.274744869451975 24.5149558037109 0.9334631237598968 1.0105097162596381 0.1578824467183897 0.07473586904170175 792.5130183863716 1460178.6683381104 0.011708388175770721 0.0187877064200001 5.3119640912308456e-08 7.274744869451975 0.07704659249974133 S(ph)GTQSDKVTLK ddPTM_A549_PD325901_60min_R1 1 SGTQSDKVTLK 11 1 Q00341;A0A024R4E5;Q00341-2;H0Y394;H7C2D1 Q00341 HDLBP Vigilin 1 S(0.522)GT(0.47)QS(0.008)DKVT(0.001)LK 47.201 0.0090946 4121400.0 2409.2 2431.1 3285.0 3063.3 3158.7 3356.0 2670.8 2941.1 3189.2 2996.8 3114.0 True False 2653.7802104407 2635.9773289461905 3507.939854309734 3252.5130837409306 2936.843808923429 3328.669848678255 2772.43875551784 2882.437453251684 3055.169014741745 2807.581536562912 2730.997741272411 0.9717255237290184 0.9652067041688767 1.2844902071121211 1.190961469717488 1.0753739428415314 1.218847529008713 1.0151743128964 1.0554521557050849 1.1187006743250902 1.0280424235191126 1.0 11.415212405555312 -11.037422347891232 0.5703581286291668 0.9707166938735451 1.1065226054669162 0.10086103092369803 0.09634347011078614 2.713569476881961 1.0189035648153235 0.20613192577466682 0.021030266394344195 9.17439959529837e-12 11.037422347891232 0.13580591159337108 S(ph)GTTPKPVINSTPGR ddPTM_A549_MK2206_60min_R1 1 SGTTPKPVINSTPGR 15 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 S(0.51)GT(0.022)T(0.466)PKPVINST(0.002)PGR 69.747 0.0005935 37766000.0 5924.8 6479.9 6803.2 6559.2 8982.4 7143.3 6704.0 6077.3 9889.8 9971.8 10206.0 True False 6924.761392547379 6809.699232109302 7767.996058951719 8166.204294453672 7661.100858913327 7899.19926466122 7922.030022018424 6938.775885950681 7649.77609076535 7719.163454284126 7671.568528729593 0.9026526148615549 0.8876540966306122 1.0125694673600334 1.0644764840295302 0.9986355241725255 1.0296719940751573 1.0326480161587381 0.9044794242488163 0.9971593243438247 1.0062040670530794 1.0 12.905305865945287 -5.760363679729339 24.999865102702117 1.0017703696514333 0.8951533198038163 0.5607930869375938 0.03743175353441979 14.672416381524359 340946.6200892308 0.005046505305327868 0.01758554519789038 1.7363461973541438e-06 5.760363679729339 -0.106617049847617 S(ph)GTTPKPVINSTPGR ddPTM_A549_PD325901_60min_R1 2 SGTTPKPVINSTPGR 15 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 S(0.639)GT(0.18)T(0.18)PKPVINSTPGR;S(0.591)GT(0.333)T(0.076)PKPVINSTPGR 95.65799999999999 5.3106e-06 165639000.0 13712.2 14459.8 14763.7 14969.7 18034.8 17158.7 15462.2 16073.5 18945.5 16113.9 17220.199999999997 True False 15104.252449611888 15678.378092672518 15765.653463340233 15894.344370344605 16768.09786468239 17018.965236148855 16050.622482240504 15752.901433083181 18149.286519750945 15096.465603984623 15102.224567841733 1.0001342770239605 1.0381502421873416 1.0439292166871355 1.0524505379286697 1.1103064842770198 1.1269177702726376 1.0627985572680638 1.0430848357683 1.2017624581214044 0.9996186678438505 1.0 13.88247345470314 -6.269119813056997 1.4779386572232025 1.0938671480614213 1.0180431310466185 0.09029364678289031 0.05678348881689994 0.6805193594268987 2.750858248006016 0.010833508633349106 0.04272685795439326 5.381213052602944e-07 6.269119813056997 -0.07582401701480279 S(ph)GTWKR ddPTM_A549_MK2206_60min_R1 1 SGTWKR 6 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.562)GT(0.438)WKR 67.757 0.02271 13460000.0 2163.9 1931.0 1194.1 915.48 2848.7 1951.5 1390.9 1994.7 2872.8 2815.2 2843.8 True False 2529.113417724357 2029.2796520321415 1363.4413355471318 1139.7726410974587 2429.6600036500718 2158.006434699141 1643.6085258987803 2277.4548335125505 2222.1153869189175 2179.244364758685 2137.605975112796 1.1831522961526633 0.9493235309304661 0.6378356682293548 0.5332005310460998 1.136626689828496 1.0095436014980586 0.7689015398696438 1.0654231228897904 1.0395346068405624 1.0194789826238637 1.0 11.061780230265185 -7.798517914592878 0.9572464412646556 1.0199374043871445 0.8621179723576402 0.08087859335862457 0.18829555423441652 0.9124003046855163 1.6844640752274356 0.03591435916716526 0.06080938849641726 1.590311082336873e-08 7.798517914592878 -0.15781943202950433 S(ph)GVRGT(ph)PVR ddPTM_A549_MK2206_60min_R1 1 SGVRGTPVR 9 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 2 S(1)GVRGT(1)PVR 50.46 0.014957 41891000.0 693.54 769.75 535.61 782.44 1213.8 695.88 600.72 859.37 1039.7 1051.9 1311.7 True False 810.5925965749573 808.9269871319216 611.5675519072101 974.1378351250661 1035.251627911137 769.5175597122411 709.8630481543712 981.1883292102478 804.2096100597325 814.2750594237216 985.9686889216736 0.8221281321433034 0.8204388194280514 0.6202707639489693 0.9880007814350104 1.0499842840276832 0.7804685568198326 0.7199651024727048 0.9951516110347745 0.8156543094074054 0.8258630000860083 1.0 9.945398021920832 -14.9999999981234 0.2648989816949595 2.095172110496294 0.829350732200136 0.0 0.13063040389095684 56.306556150668584 0.7343748502901917 32.55252005578382 0.05538639895422121 1.0000000043210316e-15 14.9999999981234 -1.2658213782961583 S(ph)GVRGT(ph)PVR ddPTM_A549_PD325901_60min_R1 1 SGVRGTPVR 9 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 2 S(1)GVRGT(1)PVR 80.469 0.00088947 47615000.0 1176.8 1179.2 1020.7 972.62 1112.8 1036.3 943.53 1016.9 888.73 1031.6 1260.4 True False 1296.2678696856276 1278.5753224027594 1089.9708399677165 1032.6965284197122 1034.640766951592 1027.86071638417 979.4365504694275 996.6171317573824 851.3797687418265 966.464599946043 1105.3787903338941 1.1726911001196911 1.1566852318711027 0.9860609317811105 0.9342467373630108 0.9360056263057709 0.929871936545563 0.8860641791159897 0.9016068884914474 0.7702154014413974 0.8743288801969049 1.0 10.110325120606452 -5.816098672073235 1.152197928758472 0.8936459540760693 1.2238390693385526 0.7743386224184012 0.0537003097605287 0.3800373168488245 0.7152520701277854 0.012205992967451819 0.11862438774402893 1.5272190333626276e-06 5.816098672073235 0.3301931152624833 S(ph)GVRGTPVR ddPTM_A549_MK2206_60min_R1 1 SGVRGTPVR 9 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.542)GVRGT(0.458)PVR 44.203 0.049674 52501000.0 2692.5 3195.5 3697.8 3216.3 3875.4 2914.4 2808.9 3002.3 4318.4 4396.1 4396.7 True False 3146.928174695146 3358.137300915952 4222.203643401878 4004.293644385192 3305.3337937113374 3222.7998735778524 3319.240771009477 3427.8852191581354 3340.2892950677588 3403.0179567759506 3304.8780472531244 0.9522070496098155 1.0161153461342074 1.2775671546825142 1.2116312877909041 1.0001379011424012 0.975164537843237 1.0043459164153699 1.0372198822910423 1.010714842517129 1.0296954707918484 1.0 11.690381320731127 -6.796911508127583 24.960878790874137 1.0050038550280842 1.1190175323568574 0.2763852621168882 0.08243432510843837 164.35337172343648 115651.03168669385 0.012119667747048736 0.02290459556090815 1.5962043568087818e-07 6.796911508127583 0.11401367732877321 S(ph)GVSITIDDPVR ddPTM_A549_MK2206_60min_R1 1 SGVSITIDDPVR 12 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.484)GVS(0.484)IT(0.032)IDDPVR 55.426 0.018503 1939500.0 406.11 331.63 375.62 316.83 498.66 370.64 427.61 468.35 623.28 433.72 384.14 True False 474.6514395637684 348.5085504937437 428.88856415560974 394.45336422303933 425.3077745709075 409.86087878907983 505.3012019265062 534.7400467617205 482.10807517363656 335.7423507683777 288.74743627534633 1.6438291043773843 1.206966735321625 1.4853415486142236 1.3660843861030614 1.4729404356177167 1.4194442176734725 1.749976409988474 1.8519300245900654 1.6696531799295482 1.162754395672686 1.0 8.173664326989952 -10.79497829345621 1.083918117403081 1.0051203712048271 1.5397406099481623 0.4880921728723213 0.17927352560171714 0.31785853788431156 0.6728934168425509 0.1255778007088126 0.032713827610933305 1.6033255247636657e-11 10.79497829345621 0.5346202387433352 S(ph)GVVNR ddPTM_A549_MK2206_60min_R1 2 SGVVNR 6 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;O60494;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1;CUBN Tight junction protein ZO-1;Cubilin 1 S(1)GVVNR;S(1)GVVNR 78.77 0.043836 3690800.0 785.3 706.3599999999999 719.3 583.9 873.52 818.61 643.44 711.8199999999999 928.47 1213.87 1200.95 True False 917.8394412583466 742.3107068925025 821.3075560330396 726.9555262122672 745.0263651449468 905.2347668506602 760.3447191777351 812.7226648573237 718.1730274619215 939.6559239306714 902.7209704661767 1.016747667647914 0.8223036034148666 0.9098133120901201 0.8052937175447005 0.8253119064689564 1.0027846881447602 0.842280997177991 0.900303295754416 0.7955647990442137 1.0409151384235829 1.0 9.818136311774587 -11.047428154887518 1.3602456678707155 0.9997387835764017 0.8687562545033316 0.33426663413413316 0.07323883619096899 0.4157928886246334 1.3762427698440853 0.049399064065552424 0.011119402779481138 8.96544488575828e-12 11.047428154887518 -0.13098252907307006 S(ph)GVVNR ddPTM_A549_PD325901_60min_R1 1 SGVVNR 6 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;O60494;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1;CUBN Tight junction protein ZO-1;Cubilin 1 S(1)GVVNR 67.494 0.054640999999999995 2102400.0 287.89 315.0 281.79 429.78 244.97 380.34 197.88 257.15 271.9 459.49 353.83 True False 317.1163808665835 341.54615549259626 300.91396394092544 456.3265344988011 227.7641523006213 377.24263714132496 205.41043168409084 252.02094151972742 260.4729885577201 430.4777229829462 310.3111531131717 1.0219303356812635 1.1006570407349587 0.9697168823035534 1.4705450639486908 0.7339863553584708 1.215691519162842 0.6619498836033677 0.8121556025020292 0.839392931722066 1.3872454104991492 1.0 8.277571740498589 -6.798461952135084 24.99993507811012 0.9051965858789229 1.1256391072167782 0.11546433162931546 0.23235683560826872 169.42595894010984 114406.41297898113 0.024864387389356098 0.0469901277392893 1.590516020356645e-07 6.798461952135084 0.22044252133785525 S(ph)HEAEVLK ddPTM_A549_MK2206_60min_R1 2 SHEAEVLK 8 0 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 S(1)HEAEVLK;S(1)HEAEVLK 93.096 0.00078963 8486300.0 1525.62 1096.65 914.3299999999999 288.90999999999997 1641.74 1289.8600000000001 987.47 1872.04 1802.25 1607.31 1722.8700000000001 True False 1783.107358172112 1152.4648008291279 1043.9957426771705 359.69296296966274 1400.2422207998268 1426.3521290602273 1166.8805169812842 2137.407402882056 1394.043252601859 1244.217554674724 1295.0338302069717 1.3768809096571142 0.8899109613568484 0.8061532589541074 0.2777479279534935 1.0812398781706272 1.101401442796493 0.9010424977043217 1.65046453075319 1.0764531551882808 0.9607606578709018 1.0 10.338774070631318 S(ph)HHAASTTTAPTPAAR ddPTM_A549_MK2206_60min_R1 2 SHHAASTTTAPTPAAR 16 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(0.999)HHAAS(0.001)TTTAPTPAAR;S(1)HHAASTTTAPTPAAR 70.094 0.00046175 8556400.0 226.84 450.06999999999994 140.73 185.62 420.81 205.75 0.0 170.67 360.97 428.57 439.96 True False 265.12504629446516 472.976640595601 160.6876301411506 231.09690833279842 358.909406443636 227.5223284342036 0.0 194.86299515495415 279.210871350641 331.7557393452083 330.70578972171944 0.8016946014690616 1.4302036894896786 0.4858930056119223 0.698799100334048 1.085283105402083 0.6879901577340326 0.0 0.589233697175143 0.8442878232812008 1.0031748752399297 1.0 8.369404493028867 -5.761637682755815 24.99999998196495 0.7983347461154511 1.1159490357533393 0.14621291585132756 0.32548654467120464 8.310558598857313 1048461.8809331208 0.046984279742561606 0.1610110643191402 1.731260088827254e-06 5.761637682755815 0.3176142896378882 S(ph)HHAASTTTAPTPAAR ddPTM_A549_PD325901_60min_R1 2 SHHAASTTTAPTPAAR 16 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(0.999)HHAAS(0.001)TTTAPTPAAR;S(1)HHAASTTTAPTPAAR 90.97200000000001 3.0795e-06 12760200.0 728.52 972.54 586.42 1115.46 971.42 680.72 615.77 724.8599999999999 902.8800000000001 923.25 1021.4300000000001 True False 802.4788140919213 1054.4993589294268 626.2179876299281 1184.359430806535 903.1908104170692 675.1764420119969 639.2034643122732 710.4020986583308 864.9350934497764 864.9558374371694 895.8005853782527 0.895823051681836 1.1771585954971924 0.699059587425372 1.3221239750657656 1.0082498551122245 0.7537128832382968 0.7135555331685444 0.7930359839610541 0.9655442378222568 0.9655673947477283 1.0 9.807033798725676 -4.918715408394707 14.365585224044914 0.9567150343093561 0.00020117479301370593 0.0 0.18594192181053532 856939.6676506759 2937081.4697009404 0.02430865007318319 24895346.65286949 1.2058258548566471e-05 4.918715408394707 -0.9565138595163424 S(ph)HNNFVAILDLPEGEHQYK ddPTM_A549_MK2206_60min_R1 4 SHNNFVAILDLPEGEHQYK 19 0 Q9Y478 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK 145.2 3.3857e-21 39593700.0 2593.87 3248.2799999999997 2834.7200000000003 1717.23 5565.09 3867.12 3472.7699999999995 3885.59 5373.16 5105.88 4726.34 True False 3031.6518419671334 3413.603577474345 3236.7259213651832 2137.951427089383 4746.472633030146 4276.336071613495 4103.727356737008 4436.384281620312 4156.147839173367 3952.458161812335 3552.65933765195 0.8533471841324464 0.9608586844497422 0.9110712887840308 0.6017890329170749 1.3360337093753607 1.2037000075666817 1.1551142304145814 1.2487502628249294 1.1698695101794587 1.1125350860194276 1.0 11.794683640811417 -6.765674337583056 24.99984972895666 1.1249232647740408 0.8466520498434222 0.6348051309190819 0.12135352691631737 69.32177480112911 409224.51438450307 0.01956119272089606 0.03792097993405183 1.7152430268339879e-07 6.765674337583056 -0.27827121493061857 S(ph)HNNFVAILDLPEGEHQYK ddPTM_A549_PD325901_60min_R1 6 SHNNFVAILDLPEGEHQYK 19 0 Q9Y478 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK 121.74 3.6023000000000003e-14 44219100.0 3896.99 4228.51 4810.820000000001 4628.29 4142.91 3635.3 4565.7300000000005 4525.45 5712.049999999999 4987.860000000001 5509.54 True False 4292.60955598759 4584.861377657135 5137.3111750107655 4914.168961690762 3851.926293863605 3605.6953220798746 4739.481353613325 4435.186349603155 5471.992402688943 4672.925668366486 4831.901507851638 0.8883892912577542 0.9488731031058739 1.0632069314043033 1.0170258962657752 0.7971864260073154 0.7462269908069878 0.9808729225775539 0.9178966794741495 1.1324718423579587 0.9670987003301242 1.0 12.238375332126775 -8.74328091135165 24.501637125976806 1.0625561437056026 0.9210808635398741 0.20457234220501563 0.09470958817855256 180.2264634378623 243183.34154679917 0.01726903182559426 0.019560623098846087 1.8060055834633575e-09 8.74328091135165 -0.14147528016572852 S(ph)HRDSEDI ddPTM_A549_PD325901_60min_R1 1 SHRDSEDI 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.5)HRDS(0.5)EDI 45.137 0.014667 22658000.0 0.0 0.0 0.0 148.1 190.59 78.237 102.78 0.0 0.0 0.0 120.88 True False 0.0 0.0 0.0 157.24780064049617 177.20361589980575 77.5998638113947 106.69134914337405 0.0 0.0 0.0 106.01252632145433 0.0 0.0 0.0 1.4832945322299433 1.6715346954612107 0.7319876858334088 1.0064032321978762 0.0 0.0 0.0 1.0 6.728090931866379 -6.099655044892934 24.999964513747113 0.665051257751126 4.700579202594549e-07 0.26061854596243117 0.5429387528995787 50.50466395698635 12659.829334539365 0.08487657438500351 0.2245624239561981 7.949594111311391e-07 6.099655044892934 -0.6650507876932057 S(ph)HSDNDRFK ddPTM_A549_MK2206_60min_R1 4 SHSDNDRFK 9 1 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.999)HS(0.001)DNDRFK;S(0.916)HS(0.084)DNDRFK;S(0.648)HS(0.352)DNDRFK;S(0.991)HS(0.009)DNDRFK 101.93 0.00019891 67007500.0 7764.43 7641.75 5635.23 2103.92 9026.23 6166.21 6256.530000000001 5936.4 8883.64 9382.52 10278.75 True False 9074.875961912065 8030.682434446721 6434.390350318452 2619.380494448559 7698.483523974574 6818.714249401072 7393.260515163921 6777.9028794625265 6871.509724257993 7263.002215556862 7726.252695931735 1.1745507581819643 1.0394019909127854 0.8327957424569463 0.33902340468721615 0.996405868012603 0.8825383426808538 0.9569012050378379 0.8772561740093535 0.8893716002682895 0.940042023137711 1.0 12.91555314799504 -10.451485547359542 0.5490632559891943 1.012805038477761 0.8745612048191571 0.020339950278766672 0.19773493734945422 3.2816233857339867 1.5733210503794322 0.22489741566510213 0.047777859320058534 3.5360178821852846e-11 10.451485547359542 -0.13824383365860382 S(ph)HSDNDRFK ddPTM_A549_PD325901_60min_R1 2 SHSDNDRFK 9 1 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.998)HS(0.002)DNDRFK;S(0.898)HS(0.102)DNDRFK 88.18700000000001 0.0003139 73643000.0 12905.6 12109.0 12404.4 11535.2 14168.9 13145.9 12258.5 13452.6 15136.4 13439.4 15105.7 True False 14215.767011399426 13129.467926539188 13246.237177716792 12247.70310566003 13173.725344051412 13038.844148909247 12725.003925608584 13184.277339639457 14500.269746248885 12590.833990417654 13247.794662921853 1.073066678123171 0.9910681936583875 0.9998824343791031 0.9245088271136255 0.9944089321464389 0.9842275247066276 0.9605375271420484 0.9952054417434345 1.0945421570302927 0.9504098086345714 1.0 13.693464596306681 -8.558599471948622 21.67494867144315 1.0446570743005976 0.986890683323631 0.0 0.04826768486548025 43.71270629302368 26523.892721516433 0.007745063307156706 0.008782134161570235 2.7631249732873054e-09 8.558599471948622 -0.057766390976966675 S(ph)HSPIQDVPK ddPTM_A549_MK2206_60min_R1 1 SHSPIQDVPK 10 0 E7ETV1;Q9BWF2 E7ETV1 TRAIP E3 ubiquitin-protein ligase TRAIP 1 S(0.555)HS(0.445)PIQDVPK 57.106 0.005549899999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)HSPLR ddPTM_A549_PD325901_60min_R1 1 SHSPLR 6 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.58)HS(0.42)PLR 82.71600000000001 0.041517 93521000.0 4384.9 4789.7 4266.8 3853.3 4380.4 3972.2 4054.5 3732.8 4587.7 4008.1 5304.7 True False 4830.051820007232 5193.3448284536125 4556.370706352751 4091.309589520754 4072.735815559627 3939.8517201787135 4208.796216207534 3658.3463756750493 4394.8949231565 3755.0278819733753 4652.255529263892 1.0382172238014347 1.1163068743292643 0.9793896052553432 0.8794249507116187 0.8754325272851124 0.8468691574218197 0.9046786423774695 0.7863597243666225 0.9446804663912963 0.8071413658070322 1.0 12.183714624955032 -5.925133930138539 5.06892745110985 0.9336792549437539 1.0752558245175938 0.4135303048144352 0.07394219528094607 0.16951361680850796 7.913743180693398 0.010708742325265598 0.0347263645781619 1.1881357670436685e-06 5.925133930138539 0.1415765695738399 S(ph)HSSSEAYEPR ddPTM_A549_MK2206_60min_R1 1 SHSSSEAYEPR 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 S(0.44)HS(0.44)S(0.11)S(0.01)EAYEPR 58.11600000000001 0.0036814 11668000.0 1355.8 1037.8 1230.6 980.4 545.29 527.07 548.16 564.02 956.5 1672.2 1633.4 True False 1584.6258938724907 1090.6195871978014 1405.1175843935196 1220.5980440118285 465.0785633412953 582.8441975592498 647.7535765020315 643.9715622388076 739.8542772166332 1294.4488586066627 1227.7817004533517 1.290641400899994 0.8882846085709667 1.144436005093322 0.9941490767952718 0.3787958096863372 0.4747132143637894 0.5275804129210038 0.5245000491545236 0.602594318634531 1.0542988693582047 1.0 10.261838357039682 -6.543037821646135 24.851701200350814 0.7122815268600963 1.0830797045553375 0.4561926999888086 0.2202495403671666 196.24933330174443 241931.55940927562 0.03543215809034097 0.07376439999760782 2.863928546500829e-07 6.543037821646135 0.37079817769524126 S(ph)HTFLPK ddPTM_A549_MK2206_60min_R1 2 SHTFLPK 7 0 P09543 P09543 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase 1 S(0.719)HT(0.281)FLPK;S(0.769)HT(0.231)FLPK 52.867 0.014228 4746300.0 1073.48 1463.93 1081.23 304.45 1747.29 954.9399999999999 828.4 921.1600000000001 1444.23 1583.4499999999998 1502.73 True False 1254.657179933797 1538.4377840494105 1234.5646723336622 379.04026366727965 1490.265955621066 1055.9911169621307 978.9095570167149 1051.737250934186 1117.1142109613997 1225.7475452462145 1129.560667761887 1.1107479356728809 1.3619788896311988 1.0929600397469843 0.3355643255694362 1.3193323724469628 0.9348688805307579 0.8666285795488324 0.931102933159048 0.9889811524465093 1.085154237598333 1.0 10.141546043422057 -5.9994801657840675 24.99996473954506 0.9559415418364573 1.2341400261611444 0.20865877801997423 0.22908030992780012 20.420550809744466 981828.7610872546 0.028319594338469176 0.08691612258375556 1.0011976791619713e-06 5.9994801657840675 0.2781984843246871 S(ph)HTFLPK ddPTM_A549_PD325901_60min_R1 1 SHTFLPK 7 0 P09543 P09543 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase 1 S(0.957)HT(0.043)FLPK 72.038 0.0061673000000000006 3019600.0 701.09 847.11 660.06 733.16 1047.9 810.9 735.31 728.06 867.2 899.67 822.15 True False 772.2641406848205 918.4989326328033 704.8556408632219 778.44562807283 974.2991190587461 804.296299253038 763.2926244270707 713.5382721479793 830.7545997692341 842.8646826613575 721.0307620382506 1.0710557459459018 1.2738692729785044 0.977566669791863 1.0796288716895737 1.351258740063381 1.11548125489044 1.058613119736184 0.9896086404564889 1.1521763612703708 1.1689718761495 1.0 9.493917001658714 -7.529943417073625 16.912250601140993 1.0662501661521269 1.1528964798402181 0.10352619397937834 0.1066195388875822 5.466797648655179 13084.335560586953 0.01625565498161758 0.024222111391299078 2.951593755920171e-08 7.529943417073625 0.08664631368809128 S(ph)HTSLKDELSDVSQGGSK ddPTM_A549_MK2206_60min_R1 1 SHTSLKDELSDVSQGGSK 18 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9 A0A087X2D8 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.369)HT(0.315)S(0.315)LKDELS(0.002)DVSQGGSK 70.452 0.00050018 3987400.0 940.27 1327.9 728.18 730.62 1213.0 741.68 911.57 1297.4 1257.2 1196.6 1631.5 True False 1098.9645886056105 1395.4844380805187 831.4468735605985 909.6219327987782 1034.569306851383 820.164085312661 1077.1904694467976 1481.3104231208629 972.4462073358613 926.2872289252072 1226.3535228906846 0.8961238077705352 1.1379136701064543 0.6779830269503067 0.7417289678873948 0.8436142495132728 0.6687827530999552 0.8783686346068553 1.2078983714493758 0.7929574867153081 0.7553182762029502 1.0 10.26015921165261 -11.052252757523984 1.2273037536570126 1.003411162155811 0.8639766929572027 0.0 0.17706261823545863 1.0879050004671242 2.798123489962077 0.13300473412534222 0.02662713237427356 8.866398412667888e-12 11.052252757523984 -0.13943446919860836 S(ph)HTSLKDELSDVSQGGSK ddPTM_A549_PD325901_60min_R1 2 SHTSLKDELSDVSQGGSK 18 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9 A0A087X2D8 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.38)HT(0.31)S(0.31)LKDELSDVSQGGSK;S(0.359)HT(0.32)S(0.32)LKDELSDVSQGGSK 127.5 8.9205e-13 18898500.0 2496.46 2583.2 2603.2 2749.7 3303.2 3152.5 3083.0 3254.0 3357.3 3183.8 3522.1 True False 2749.8987814032816 2800.8953297411886 2779.868806313274 2919.5427239782057 3071.1946274213674 3126.827085208046 3200.3252520823316 3189.0964172863823 3216.2043563252414 2982.774324649292 3088.9040284314556 0.8902506377965 0.9067602308005284 0.8999531162918294 0.9451710694491045 0.9942667687804205 1.0122771884226678 1.0360714423709227 1.0324362259017172 1.0412121343758385 0.9656416312046909 1.0 11.592879332106463 -6.665145698762446 1.5481177394788048 1.0221891822667593 0.8965131338172039 0.8582829738145255 0.020382556687383015 0.07652945882801218 0.36641708133330203 0.002486081143355762 0.006763287756931606 2.1619930883943506e-07 6.665145698762446 -0.12567604844955538 S(ph)HYADVDPENQNFLLESNLGK ddPTM_A549_MK2206_60min_R1 1 SHYADVDPENQNFLLESNLGK 21 0 F8VUY8;Q96QD8 F8VUY8 SLC38A2 Sodium-coupled neutral amino acid transporter 2 1 S(0.577)HY(0.423)ADVDPENQNFLLESNLGK 98.132 1.7661e-07 2341800.0 2333.0 2446.4 2323.9 1759.5 3915.3 2491.5 2063.5 2214.5 3534.9 2899.9 3074.0 True False 2726.753363626286 2570.911310580752 2653.4639642224097 2190.577578986957 3339.364556566546 2755.148876276152 2438.411239623361 2528.41215662182 2734.250794075356 2244.810575931982 2310.6409619160063 1.180085270091133 1.112639892114146 1.148367058299759 0.9480389273331797 1.4452113554662824 1.1923742899422831 1.0552964652723054 1.0942470934667563 1.183330010651282 0.9715099026334939 1.0 11.174077389251517 -10.89113948100031 0.8011537560124682 0.9846533917574866 1.1524669729172163 0.23131855522463052 0.11532950886744828 1.1065841785701243 1.0601259634042652 0.12461558959241127 0.020792600463762616 1.2848739347277077e-11 10.89113948100031 0.16781358115972977 S(ph)IDAALFR ddPTM_A549_MK2206_60min_R1 2 SIDAALFR 8 0 Q5FWE3-2;Q5FWE3 Q5FWE3-2 PRRT3 Proline-rich transmembrane protein 3 1 S(1)IDAALFR;S(1)IDAALFR 85.676 0.0029335999999999997 3321000.0 484.88 599.45 761.29 607.51 905.11 590.23 654.28 706.21 805.69 1046.92 1137.54 True False 566.7158898221668 629.9594445420339 869.2523694319372 756.3499772721607 771.969517991967 652.6877468370351 773.1542068625015 806.3174301774193 623.2025014225507 810.4200448824821 855.0574234931465 0.6627810884407919 0.7367451907130108 1.016601160984955 0.8845604476273201 0.9028276894413215 0.7633262151805252 0.9042131974060319 0.9429979882326373 0.7288428639992338 0.9477960457575956 1.0 9.7398775007755 -11.080513001460567 1.4045095374147851 0.9999473314919084 0.8316702233785134 0.20280408067338918 0.1020370143040085 0.483665990624722 1.7046412851574262 0.07606964893157742 0.01674964108081109 8.307818472389825e-12 11.080513001460567 -0.16827710811339502 S(ph)IDAALFR ddPTM_A549_PD325901_60min_R1 2 SIDAALFR 8 0 Q5FWE3-2;Q5FWE3 Q5FWE3-2 PRRT3 Proline-rich transmembrane protein 3 1 S(1)IDAALFR;S(1)IDAALFR 109.66 0.0016547999999999999 3923500.0 864.1700000000001 888.8299999999999 693.42 802.13 863.75 860.9300000000001 829.28 779.9300000000001 997.44 947.64 879.74 True False 951.8999022316699 963.7348234491559 740.4796510731978 851.6757483305952 803.0831797757342 853.9188715204318 860.8387041994276 764.3736843067511 955.5210654910339 887.8058486747454 771.5375571313389 1.233770013440354 1.2491094108657879 0.9597454384805093 1.1038681661813312 1.040886697417149 1.1067755077217443 1.1157443940903151 0.9907148099812226 1.2384634508834098 1.1506968655883776 1.0 9.591592576212124 -11.201368013798952 1.6416661486665858 1.000036631585804 1.1285488156876353 0.0 0.10228503085193844 0.5287570785767574 2.565580532588046 0.07217234729245425 0.01507967616971128 6.2897297591155885e-12 11.201368013798952 0.1285121841018313 S(ph)IDDLEEK ddPTM_A549_MK2206_60min_R1 1 SIDDLEEK 8 0 H7BYY1;P09493-2;P09493-8;P09493-7;P09493-9;P09493-3;Q6ZN40 H7BYY1;P09493-9 TPM1 Tropomyosin alpha-1 chain 1 S(1)IDDLEEK 154.84 0.00044079 11661000.0 5203.2 5224.0 5413.8 4394.1 7760.0 5341.5 5745.4 5989.3 9534.4 7988.8 8473.0 True False 6081.372953973552 5489.879286491926 6181.5582467005015 5470.654697258642 6618.514279609843 5906.733984599266 6789.264810337804 6838.301616461984 7374.873623308181 6184.1245315374335 6368.920257096391 0.9548514832160998 0.8619795922825352 0.9705818250452851 0.8589610917428459 1.0391893778596692 0.927430984556268 1.065999343102633 1.073698733916883 1.157947238402135 0.970984763806227 1.0 12.636833093286638 -7.578356719660406 1.3498413289766888 1.077123193284599 0.9218465665314954 0.4025755728617344 0.06712031054394076 0.2646689389131041 0.969761798225094 0.011732447877280727 0.020436511609371835 2.6402392336807616e-08 7.578356719660406 -0.1552766267531036 S(ph)IDISATIPK ddPTM_A549_MK2206_60min_R1 1 SIDISATIPK 10 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 S(1)IDISATIPK 58.676 0.010718 709410.0 652.39 734.67 723.87 803.14 1480.0 676.13 566.67 780.98 1249.9 754.75 1274.0 True False 762.497482595865 772.0615649707157 826.5256507516145 999.9093360543241 1262.2939605441454 747.67762782123 669.6266039047106 891.6863066509411 966.7996456801574 584.2514508033597 957.6306393887413 0.7962333818836139 0.8062206170257095 0.8630944090084549 1.0441492731399753 1.3181428294210298 0.7807578382187886 0.6992535288262449 0.9311380296061823 1.0095746793328049 0.6101010418550197 1.0 9.903325501817045 -6.070719911648531 4.41642127729495 0.985846299633121 0.8068391298265376 0.0 0.18666896442502245 0.27326537241163273 10.142406586162245 0.021396903037102913 0.061355055377504894 8.497283113140003e-07 6.070719911648531 -0.17900716980658338 S(ph)IDQDYER ddPTM_A549_MK2206_60min_R1 2 SIDQDYER 8 0 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(1)IDQDYER;S(1)IDQDYER 107.11 0.0018535000000000001 12003800.0 2435.6 2369.2 2349.17 2066.95 3599.6 2760.1000000000004 2313.0 2407.42 3686.3999999999996 3234.5 3379.5 True False 2846.669735297121 2489.782160328611 2682.3176302045536 2573.3528427889114 3070.1036083612844 3052.171949993901 2733.2421600430516 2748.6791574145404 2851.4362859711437 2503.824203542188 2540.276880544939 1.1206139602728875 0.980122355715218 1.0559154597467124 1.0130206130273787 1.208570464060078 1.2015115255228204 1.075962301974231 1.0820391975637298 1.1224903504847294 0.9856501166144805 1.0 11.31077003851733 -4.889919736256712 19.658994785053185 1.0726364784776525 8.121025638028566 0.0323327865775519 0.07562280735892521 1588.052344978548 288195.48758816684 0.010615620214268377 8140.8123382205395 1.2884876603753052e-05 4.889919736256712 7.048389159550914 S(ph)IDQDYER ddPTM_A549_PD325901_60min_R1 2 SIDQDYER 8 0 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(1)IDQDYER;S(1)IDQDYER 103.21 0.0021573 12903100.0 2670.6000000000004 2880.6000000000004 2732.8 2821.0 3499.8 3463.1 3002.3 2762.1 3681.8 3562.7 3380.8 True False 2941.71734600819 3123.3582714665804 2918.2642416613844 2995.2467630441565 3253.986121654546 3434.897661787146 3116.554169421599 2707.0077486744694 3527.0667498043895 3337.750513985815 2964.9830326569586 0.9921531805097987 1.053415226011496 0.984243150641672 1.01020705010918 1.0974720886475389 1.158488134317953 1.0511204061187547 0.9129926609558658 1.1895740079981978 1.1257233101245827 1.0 11.533808133523854 -6.753128055479855 24.113602582367754 1.0806760236729132 1.0112652715670623 0.15949126338722341 0.07298688261460332 202.33122473962771 587013.9365136012 0.01239741923725437 0.025453232438795614 1.7655171659414994e-07 6.753128055479855 -0.0694107521058509 S(ph)IDRGLER ddPTM_A549_MK2206_60min_R1 5 SIDRGLER 8 1 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(1)IDRGLER;S(1)IDRGLER;S(1)IDRGLER;S(1)IDRGLER;S(1)IDRGLER 87.184 0.00075756 92248500.0 3011.3399999999997 3227.6699999999996 3223.58 2644.9799999999996 5954.0 3200.47 3357.94 2729.65 5586.96 5570.42 5318.16 True False 3519.580571805566 3391.9446165067748 3680.7321166091833 3293.0002187376617 5078.174487216108 3539.141611099955 3968.034232120605 3116.586246702528 4321.52248054181 4312.058253175289 3997.5140982508865 0.8804423162248657 0.8485134844154574 0.9207552559275998 0.8237620025351543 1.2703331026244697 0.8853356171147733 0.992625450365971 0.7796310832440069 1.0810524676905313 1.0786849394882763 1.0 11.964887406407913 -5.149293748210793 0.3817727268224439 1.024783869162855 0.6912710811708599 0.12485630725704944 0.12760832452487073 8.014876108296942 0.7343128543277077 0.03219381077719478 1.2423221428855964 7.090979858502656e-06 5.149293748210793 -0.33351278799199513 S(ph)IDRGLER ddPTM_A549_PD325901_60min_R1 4 SIDRGLER 8 1 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(1)IDRGLER;S(1)IDRGLER;S(1)IDRGLER;S(1)IDRGLER 91.855 0.00072492 108199000.0 3422.49 3404.26 3170.2799999999997 3256.03 3788.5800000000004 3755.19 3787.62 3812.58 4310.7 3610.21 3668.21 True False 3769.9386652960284 3691.148937451511 3385.434265242335 3457.147578119341 3522.4832106914632 3724.6089776692775 3931.7599517651893 3736.5351009888514 4129.5362698630515 3382.260724477707 3217.0434246990567 1.171864400819735 1.1473730535038722 1.0523433532946578 1.0746350364986899 1.09494425336238 1.1577739203249027 1.222165644883389 1.1614810892204201 1.2836433099280764 1.05135687585383 1.0 11.651519694751325 -7.2621825722408095 24.999986733338677 1.1481976727181122 1.1054350957696282 0.055378067017537225 0.07715079995224221 227.42151224969268 7650263.5154652335 0.01604739156568364 0.026591523292957442 5.467860522109213e-08 7.2621825722408095 -0.042762576948484066 S(ph)IEDDEEGHLICQSGDVLR ddPTM_A549_MK2206_60min_R1 2 SIEDDEEGHLICQSGDVLR 19 0 A0A087WX74;B7ZL31;Q9HAZ1 A0A087WX74 CLK4 Dual specificity protein kinase CLK4 1 S(1)IEDDEEGHLICQSGDVLR;S(1)IEDDEEGHLICQSGDVLR 70.453 0.00032777 13833300.0 0.0 0.0 0.0 120.86 418.96000000000004 143.75 0.0 217.59 420.3 131.47 209.75 True False 0.0 0.0 0.0 150.47070542561158 357.3315389929559 158.96152958647266 0.0 248.43404884142777 325.1027210811825 101.77083569011948 157.66328619449646 0.0 0.0 0.0 0.9543801163701994 2.2664219909265677 1.0082342783999483 0.0 1.5757254262413047 2.062006500867485 0.6454948272774996 1.0 7.300702940000568 -6.372136105611082 3.7904338747562316 1.413796821854631 2.004102365992744e-09 0.40817874030539647 0.613239011894209 0.1566903126727841 4.018007728594793 0.09181302998618152 0.2262385046322878 4.2448651125383323e-07 6.372136105611082 -1.4137968198505286 S(ph)IEDDEEGHLICQSGDVLR ddPTM_A549_PD325901_60min_R1 2 SIEDDEEGHLICQSGDVLR 19 0 A0A087WX74;B7ZL31;Q9HAZ1 A0A087WX74 CLK4 Dual specificity protein kinase CLK4 1 S(1)IEDDEEGHLICQSGDVLR;S(1)IEDDEEGHLICQSGDVLR 103.31 6.1438e-10 19218200.0 145.06 230.72 449.27 245.98000000000002 372.53999999999996 262.51 129.74 320.22 0.0 175.01 434.88 True False 159.7863844124721 250.16358411191044 479.76016387997987 261.1736259388876 346.37407559322975 260.37220559491305 134.67732669645216 313.8329608922699 0.0 163.95983873260653 381.3925169314535 0.4189552162639573 0.6559215847354225 1.257917086942232 0.6847895916789252 0.9081826732732737 0.6826882910282924 0.3531200029303598 0.8228608243739458 0.0 0.4298978911588728 1.0 8.575132727468942 -7.528075138827368 23.13853510718102 0.5301436910634005 0.798339910279861 0.144414384833498 0.3058926171011076 110.8232333366441 493471.01141961664 0.06135723558311118 0.09122937030279928 2.9643184779104732e-08 7.528075138827368 0.2681962192164604 S(ph)IEDLHR ddPTM_A549_MK2206_60min_R1 6 SIEDLHR 7 0 Q96PY5-3;Q96PY5 Q96PY5-3 FMNL2 Formin-like protein 2 1 S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR 143.28 0.0014652 567370500.0 2994.9399999999996 3683.4100000000003 2809.31 2979.29 4086.4000000000005 2677.25 2927.2899999999995 2522.23 3825.31 3596.22 4619.74 True False 3500.4126527470694 3870.879835883848 3207.712401277879 3709.2161837454096 3485.2959732213476 2960.554817985279 3459.140701544495 2879.7638265054206 2958.88339276483 2783.8314043167393 3472.5310596622785 1.0080291846511238 1.1147142442723927 0.9237390094330346 1.0681592532987019 1.0036759681453535 0.8525639561228887 0.9961439198418327 0.8292982199518447 0.8520826284711753 0.8016721395682724 1.0 11.761771882949487 -7.073781208359491 7.33415028822929 0.9208802546206666 1.0283947499881467 0.40605346891672267 0.0764741271869269 0.25797827401574996 22.616075275801496 0.011159867873584238 0.019440778784254466 8.437597253579594e-08 7.073781208359491 0.10751449536748015 S(ph)IEDLHR ddPTM_A549_PD325901_60min_R1 6 SIEDLHR 7 0 Q96PY5-3;Q96PY5 Q96PY5-3 FMNL2 Formin-like protein 2 1 S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR 159.28 0.0004064 664823000.0 3165.72 3537.8699999999994 3465.7999999999997 3442.15 4069.0799999999995 3647.85 2932.3499999999995 3573.9500000000007 3422.38 3767.6200000000003 4062.59 True False 3487.101563920109 3836.0187210558447 3701.0100295484585 3654.763787810155 3783.28185836393 3618.1431190408125 3043.942183893489 3502.664763540465 3278.54927024704 3529.731830213947 3562.9171848798583 0.978720914064045 1.0766511041387552 1.0387583649865992 1.0257784837997557 1.0618495075942953 1.0155002014628125 0.8543398642020726 0.9830890199763582 0.9201867739616274 0.9906859034482357 1.0 11.798843235056772 -7.539931323749942 24.989029252045214 0.9549690753331413 1.0381906559600222 0.474291387608225 0.0438595234217504 169.68016999142128 248650.2258395758 0.006914721329640521 0.010257507091439978 2.8844875994806227e-08 7.539931323749942 0.0832215806268809 S(ph)IEEGDGAFGR ddPTM_A549_MK2206_60min_R1 2 SIEEGDGAFGR 11 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(1)IEEGDGAFGR;S(1)IEEGDGAFGR 60.49 0.008289200000000002 3736000.0 809.35 1138.35 902.7 662.25 999.33 907.25 605.82 799.64 1184.1599999999999 1271.21 1073.95 True False 945.9484932922995 1196.2871527140276 1030.7164337981708 824.5012797295319 852.3298808044458 1003.2545928161907 715.8896521389024 912.991418794795 915.9496507149496 984.0427781063123 807.2585754878639 1.1718035856362614 1.4819132172006417 1.2768107581579555 1.0213595801459865 1.0558325506661148 1.2427921155373014 0.8868157909703925 1.13097766504745 1.134642205765852 1.2189932792124376 1.0 9.65688705140909 -6.159426603872008 4.724918406605008 1.067184476088187 1.3372006245956507 0.41411725637607866 0.11717943980211555 0.1258510491192727 4.542442632304775 0.014320708623724943 0.03942740566518997 6.927449940241836e-07 6.159426603872008 0.2700161485074637 S(ph)IEEGDGAFGR ddPTM_A549_PD325901_60min_R1 2 SIEEGDGAFGR 11 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(1)IEEGDGAFGR;S(1)IEEGDGAFGR 93.839 0.00028933 6211300.0 964.51 1005.81 935.8199999999999 835.24 1221.22 946.38 1253.3 1143.17 1065.1100000000001 1590.1799999999998 1662.9299999999998 True False 1062.4263451652655 1090.5731385905017 999.3303727428114 886.8308778323293 1135.445720180287 938.6729950512891 1300.9950173320744 1120.3685775504837 1020.3471307197983 1489.775763418183 1458.4001521818004 0.7284875440912777 0.7477873181506317 0.6852237167198523 0.6080847403270013 0.778555678619228 0.6436319919790275 0.8920699955946629 0.7682175402096512 0.6996345476194139 1.0215137191184764 1.0 10.510170901694776 -11.510522545454918 0.41652470192257196 1.1855226663397807 0.7131823658963413 0.7079143743389186 0.07041108486105736 1.6892754207924772 0.23788269595724004 0.3767195816932168 0.01908516139418579 3.0865794084575066e-12 11.510522545454918 -0.47234030044343933 S(ph)IEEREEEYQR ddPTM_A549_PD325901_60min_R1 2 SIEEREEEYQR 11 1 H7C0E9;B5MCU0;H7C2F9;Q9UBL0;Q15032-2;Q15032-4;Q15032;Q15032-3 H7C0E9;Q15032-2 R3HDM2;R3HDM1;ARPP21 cAMP-regulated phosphoprotein 21;R3H domain-containing protein 1 1 S(1)IEEREEEYQR;S(1)IEEREEEYQR 116.96 5.0956e-06 8828700.0 818.37 935.0 879.74 856.53 1255.92 870.29 895.48 768.78 1042.84 996.28 1139.74 True False 901.4503199478478 1013.7957313827854 939.4444467063762 909.4359127792313 1167.7085118887878 863.2026467837301 929.5579814254584 753.4460798037569 999.0130613737874 933.3747107737914 999.5592054071345 0.9018478496035404 1.0142428041266973 0.9398587313532141 0.9098369639933488 1.168223458472541 0.8635833096371069 0.9299679062500719 0.7537783412207861 0.9994536151231536 0.9337863187339811 1.0 9.965148212289977 S(ph)IELEHFEER ddPTM_A549_PD325901_60min_R1 1 SIELEHFEER 10 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 S(1)IELEHFEER 97.463 0.00015828 1865600.0 576.07 354.33 404.26 286.74 445.84 438.33 324.34 463.15 501.53 455.58 400.42 True False 634.5522023196803 384.19063262124325 431.69551461286255 304.4512785662111 414.5257364645017 434.76038580784814 336.6829361856582 453.91210991585353 480.45243821755554 426.8146010502307 351.1708784715153 1.8069613433824383 1.0940275978846756 1.2293032853174892 0.8669604948204901 1.1804103411670717 1.2380308632087016 0.9587438959946895 1.2925676294444555 1.3681443071496793 1.2154043151526617 1.0 8.456029401314554 -14.99999825053598 0.021843887526708752 8.313713839950556e-09 2.052865162397635 0.0738520300235822 0.22999738748562992 4860.071291340317 8.240416352854835 531.8238022637704 280.28051022468543 1.0000040282978886e-15 14.99999825053598 2.0528651540839213 S(ph)IEVENDFLPVEK ddPTM_A549_MK2206_60min_R1 2 SIEVENDFLPVEK 13 0 Q5JPT2;Q96B97-2;Q96B97;Q5VSN0;Q5JPT1 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK 151.9 4.4658999999999997e-13 60962000.0 3192.44 4279.0 5071.299999999999 4300.43 5858.7 4823.1 4635.8 4542.799999999999 6268.9 5940.799999999999 5787.0 True False 3731.2458243356664 4496.782822913273 5790.486596566597 5354.03554305364 4996.8929909729595 5333.477240685329 5478.064853232848 5186.755811741522 4849.004159376217 4598.76915393521 4349.9281869251545 0.8577718215098126 1.0337602437735705 1.3311683199670783 1.2308330880373135 1.148729996507167 1.2261069634934407 1.259346043849322 1.192377342534452 1.1147320026917147 1.057205764398137 1.0 12.086775868331005 -9.765106213244897 0.9366213369922365 1.0170081194070741 1.1662689962708066 0.13564248873456697 0.121090374322765 0.5954759363782481 1.0823710241056037 0.041909899747650636 0.02506331553184965 1.7174882982054537e-10 9.765106213244897 0.14926087686373246 S(ph)IEVENDFLPVEK ddPTM_A549_PD325901_60min_R1 5 SIEVENDFLPVEK 13 0 Q5JPT2;Q96B97-2;Q96B97;Q5VSN0;Q5JPT1 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK 163.99 7.0686e-19 211153600.0 6970.4 7168.799999999999 7374.5 6908.6 9770.400000000001 8512.6 7366.6 8697.8 8751.2 8166.299999999999 8032.0 True False 7678.029876662726 7772.939934905786 7874.977916470975 7335.328531431008 9084.160810050176 8443.276207943532 7646.939994158198 8524.3155557079 8383.417497117762 7650.678424330522 7044.11491904303 1.089992137394859 1.1034658043258854 1.1179513689053815 1.041341405660591 1.289609967249696 1.1986284018618174 1.0855785406744989 1.2101329483798318 1.1901307110214894 1.0861092574806965 1.0 12.782202730427047 -10.831321953831601 1.0693329679585937 0.9997116101367574 1.1502688461415875 0.2114031305963835 0.07149785605829109 0.42687291298017027 0.8638753585047633 0.04807517259271148 0.011754064444831794 1.4746129589144443e-11 10.831321953831601 0.15055723600483017 S(ph)IGEDVYEKPISELDRLEEK ddPTM_A549_MK2206_60min_R1 1 SIGEDVYEKPISELDRLEEK 20 2 A0A075B6G6;Q7Z7B0-2;Q7Z7B0 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 S(0.969)IGEDVY(0.03)EKPIS(0.002)ELDRLEEK 43.955 0.010425 982950.0 848.85 772.66 960.52 677.2 1419.9 839.61 1072.6 801.91 1364.4 1380.7 1000.6 True False 992.1151276100192 811.9850937023061 1096.7361792309948 843.1140304006636 1211.0345909301566 928.4569729119885 1267.4775360407154 915.5831982463773 1055.3655784990844 1068.7989110622043 752.1234048448779 1.3190855665695425 1.0795902487169302 1.4581864786632877 1.1209783194747838 1.6101541091915987 1.234447654375918 1.6851989020367304 1.217331082038608 1.403181408397667 1.421041951596546 1.0 9.554825581666085 -10.750703991518963 0.8869214261511392 0.9890552472491431 1.3496810249379698 0.0 0.21700663413718302 0.5453281293256338 0.7237603786644552 0.13235481217866174 0.029960595903586795 1.7753991535236974e-11 10.750703991518963 0.36062577768882675 S(ph)IGEDVYEKPISELDRLEEK ddPTM_A549_PD325901_60min_R1 2 SIGEDVYEKPISELDRLEEK 20 2 A0A075B6G6;Q7Z7B0-2;Q7Z7B0 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 S(0.933)IGEDVY(0.067)EKPISELDRLEEK;S(0.994)IGEDVY(0.005)EKPISELDRLEEK 68.762 0.00023552 4818500.0 1326.37 1133.91 1344.73 1254.2 1516.0 1332.24 1175.24 1185.25 1325.4 2007.04 1419.0500000000002 True False 1461.0221059780129 1229.468575157491 1435.9914643183952 1331.669085505134 1409.5213899160797 1321.3906791427642 1219.9644013160037 1161.6092589393625 1269.698047202655 1880.3151518764114 1244.5158460991051 1.1739682628851529 0.9879091367227028 1.1538555084047055 1.0700298350392305 1.1325861332615241 1.0617708752239843 0.980272292345608 0.933382457588137 1.0202345363319258 1.5108808439604837 1.0 10.281368884561633 -7.583038822295396 4.633791272220908 1.0010847347985903 1.0982438122963945 0.0 0.16189877580309242 0.13405387971835342 5.878269468956525 0.007227642940217785 0.010905876289511514 2.6119278594517073e-08 7.583038822295396 0.09715907749780417 S(ph)IGS(ph)DSQGR ddPTM_A549_PD325901_60min_R1 1 SIGSDSQGR 9 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 S(1)IGS(0.867)DS(0.133)QGR 66.663 0.0060652 4804100.0 406.83 413.24 422.53 470.17 628.18 470.2 467.11 326.58 438.26 534.59 536.18 True False 448.1310821075831 448.0651850659064 451.20542667929755 499.21133306645544 584.0588039033523 466.37084709431304 484.88612666240005 320.06610570294606 419.8414562902036 500.8358961662998 470.23325912506107 0.9529974186457965 0.9528572817235393 0.9595353325684202 1.061624892282848 1.242061875823247 0.9917861785490575 1.0311608489042285 0.6806539084421137 0.8928365830000649 1.0650796949117964 1.0 8.8772327727424 S(ph)IGSAVDQGNESIVAK ddPTM_A549_MK2206_60min_R1 2 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK 358.04 1.0336999999999994e-236 58168000.0 9922.5 11183.099999999999 9726.7 9567.8 14296.0 11533.6 10548.2 10559.6 16834.8 14573.3 14979.3 True False 11597.17541816624 11752.272023117881 11106.09231929176 11911.911429514868 12193.077337796687 12754.077896615945 12464.671401887637 12056.455637418734 13021.744679651416 11281.18140840358 11259.526402351472 1.0299878523970825 1.0437625529847776 0.986372954103321 1.0579407164964905 1.0829120961295717 1.1327366214934536 1.1070333650342947 1.0707782198459812 1.156509094106473 1.00192326082628 1.0 13.458858525675561 -6.506625092381867 5.001867492351143 1.082573000783009 1.0219599649452187 0.23027228982042813 0.04658355034046301 0.2566773668243887 18.02185825011403 0.008343366254755732 0.018918876321688382 3.1144037068380685e-07 6.506625092381867 -0.06061303583779032 S(ph)IGSAVDQGNESIVAK ddPTM_A549_PD325901_60min_R1 4 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(0.998)IGS(0.002)AVDQGNESIVAK 329.08 1.6224e-186 94022700.0 24479.499999999996 24133.6 25101.6 25318.0 30397.399999999998 29052.6 25476.800000000003 28533.2 28178.5 26516.800000000003 31010.4 True False 26964.640819144548 26167.423168876576 26805.145524183037 26881.835358650103 28262.39148933709 28816.005257958837 26446.333565439905 27964.082942137637 26994.25563837334 24842.524722614613 27196.31739112201 0.9914813256278185 0.9621678844437479 0.9856167340116913 0.9884365950011097 1.0391992078516883 1.0595554112545238 0.9724233316262543 1.0282304967975648 0.9925702531764601 0.9134517870689444 1.0 14.731123691273083 -6.533258691022519 24.988894240668113 1.0046728693612574 0.9795015800024733 0.05468879453528541 0.03664338864525265 279.85019456890615 673715.3040082607 0.0035699380499968855 0.007438141737723582 2.929147954821364e-07 6.533258691022519 -0.0251712893587841 S(ph)IGSDSQGR ddPTM_A549_PD325901_60min_R1 1 SIGSDSQGR 9 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 S(0.943)IGS(0.052)DS(0.004)QGR 97.28399999999999 9.5613e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)IHEVDISNLEAALR ddPTM_A549_MK2206_60min_R1 4 SIHEVDISNLEAALR 15 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR 108.52 3.662e-06 45380300.0 2936.11 3074.02 3217.58 2405.5 4613.91 3372.51 3859.33 4060.4 5795.110000000001 4455.969999999999 4198.25 True False 3431.653587002479 3230.474487798985 3673.8812263878604 2994.847607986998 3935.209951009617 3729.3867697090445 4560.520305023325 4635.974134453483 4482.526837889059 3449.3632821944293 3155.7086591944926 1.0874430936468078 1.0236922468703358 1.1642016495038656 0.9490253795328004 1.247013072497667 1.181790580966047 1.445165190308606 1.469075455031655 1.4204501498668898 1.0930550487112753 1.0 11.623748303911784 -6.786632334318578 23.89736586685516 1.244101339223458 1.0614986680785807 0.31621359596237475 0.1457679017954053 185.7388979515795 176186.5816354162 0.027651174038762858 0.05227419562707169 1.634435044859685e-07 6.786632334318578 -0.18260267114487716 S(ph)IHEVDISNLEAALR ddPTM_A549_PD325901_60min_R1 4 SIHEVDISNLEAALR 15 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR 151.44 3.8846e-14 50647000.0 6493.610000000001 6672.0 7500.49 6963.3099999999995 8509.6 8587.68 7219.110000000001 7933.5 9712.36 8253.810000000001 9296.36 True False 7152.836506856974 7234.2728553860325 8009.518355510391 7393.417843875576 7911.915052526298 8517.744781316234 7493.837181498574 7775.260118789649 9304.1832848417 7732.663027995971 8152.966654481431 0.8773292974190301 0.8873178515221302 0.9824053862783567 0.9068377386054493 0.9704338785903613 1.0447417660704275 0.9191546462881025 0.953672503310906 1.14120217574145 0.9484477682421978 1.0 12.993109399088885 -7.4405554393711455 0.6420934836980171 1.060284262578696 0.90265043429615 0.1449077822576198 0.0674620162509075 0.571046288814694 0.4620463238229771 0.01545370929158178 0.03895854504424297 3.626139942107526e-08 7.4405554393711455 -0.1576338282825459 S(ph)IHRDHIESPK ddPTM_A549_MK2206_60min_R1 2 SIHRDHIESPK 11 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.999)IHRDHIES(0.001)PK;S(1)IHRDHIESPK 67.93 0.0018394000000000001 13239400.0 1836.95 1935.67 1701.1100000000001 1417.27 1743.92 1525.23 1331.23 1608.17 2633.9 3040.3999999999996 3590.6000000000004 True False 2146.982250884403 2034.187335084958 1942.352977399365 1764.5012136236685 1487.3916781568553 1686.6288262342655 1573.0972592797712 1836.1330223140717 2037.3258554740103 2353.5715283504933 2698.954924481331 0.7954865164326511 0.7536944454438697 0.7196685501417311 0.6537720202803163 0.5510991179086451 0.6249192274148082 0.5828542170196042 0.6803125927221362 0.7548573105071517 0.8720306912138551 1.0 11.398185167072526 -9.944198916394475 0.7145617610575198 0.9858419626184107 0.6667819576711815 0.6204218334919424 0.07692184579412703 0.2562905104022914 0.2662702608040386 0.03934391802312097 0.01725526937157335 1.1371063468942529e-10 9.944198916394475 -0.3190600049472292 S(ph)IHRDHIESPK ddPTM_A549_PD325901_60min_R1 1 SIHRDHIESPK 11 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.982)IHRDHIES(0.018)PK 76.548 0.00051466 13474000.0 1401.8 1955.8 1506.8 1784.7 2109.9 1950.6 1373.5 1605.2 2029.7 2155.1 2041.7 True False 1544.1097040493823 2120.622129880698 1609.0605091244777 1894.936865652217 1961.7079027598513 1934.7149603193684 1425.7692941080388 1573.1830267449607 1944.3987674718815 2019.0266182083324 1790.5838434026577 0.8623498473632494 1.1843188118188683 0.8986233820063795 1.058278769036169 1.0955688615127932 1.0804939223861294 0.7962594431761656 0.8785866311378254 1.0859021065313135 1.1275800491819268 1.0 10.806214358544885 S(ph)IKLDGK ddPTM_A549_PD325901_60min_R1 2 SIKLDGK 7 1 Q13576;F5H7S7;Q13576-3;Q13576-2 Q13576 IQGAP2 Ras GTPase-activating-like protein IQGAP2 1 S(1)IKLDGK;S(1)IKLDGK 54.416000000000004 0.011855 7087500.0 3207.1 3867.1 3307.8 3800.3999999999996 4988.9 3641.3 3623.0 3638.2 3774.0 3607.5 3837.4 True False 3532.682431057766 4192.994088588631 3532.287199417274 4035.142076665373 4638.496874770665 3611.646460069168 3760.8752475816727 3565.633246887312 3615.3919044385284 3379.7218343401964 3365.424127282833 1.049699026764265 1.2459036157127568 1.049581587884188 1.1989995685694614 1.3782800322750648 1.0731623484809116 1.1175040961681457 1.0594900113722436 1.0742752674556695 1.004248411646382 1.0 11.716572616472291 -8.12536562610242 1.220434340602464 1.03287623035421 1.1768360359929686 0.3279600152477281 0.09048758196029465 0.37708938889108345 1.1070491609419382 0.016334388346641148 0.022657129172864377 7.492631501632376e-09 8.12536562610242 0.14395980563875854 S(ph)IKRPSPAEK ddPTM_A549_MK2206_60min_R1 1 SIKRPSPAEK 10 2 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 S(0.918)IKRPS(0.082)PAEK 53.251999999999995 0.0070756 21028000.0 2336.4 3118.9 3845.5 2915.9 4065.8 3059.3 3507.2 2146.6 5070.2 4971.7 5208.3 True False 2730.72720050427 3277.6386881010076 4390.849724350135 3630.295630899726 3467.7262059326913 3383.0330954010146 4144.41284206787 2450.887123686792 3921.8077954456608 3848.5895170043887 3914.9353682326396 0.6975152700252701 0.837213997119106 1.1215637836525365 0.9272938859623086 0.8857684430939057 0.8641351075300773 1.0586159035209886 0.6260351431531351 1.0017554382299096 0.983053142647869 1.0 11.934772774885955 -2.0000000049149333 0.07722732957500175 1.109348058544398 0.4195318017782046 0.06616008912289262 0.13752095247235907 286.74684253672683 1.574191599198435 2.1716512116033364 21.200321324008264 0.009999999886829479 2.0000000049149333 -0.6898162567661934 S(ph)IKRPSPAEK ddPTM_A549_PD325901_60min_R1 1 SIKRPSPAEK 10 2 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 S(0.551)IKRPS(0.449)PAEK 40.113 0.021126 5688300.0 1523.5 1661.3 1791.2 2211.2 1709.4 1973.5 1680.9 2076.8 1697.6 1868.2 2480.4 True False 1678.164598458577 1801.3035813328563 1912.7616033606073 2347.7808020004404 1589.337641109859 1957.42847031184 1744.8675693237735 2035.376594781919 1626.2557755630207 1750.2415331709926 2175.326524551088 0.7714541148276083 0.8280612409231681 0.8792986164480917 1.0792774213447984 0.7306202646693895 0.8998320243972502 0.8021175440242718 0.9356648630954152 0.7475915717520264 0.8045879611255978 1.0 11.087016255735517 -11.084063193780935 1.4176346051130397 0.9997645745543483 0.844112077404425 0.0 0.1098968511832875 0.4592285438528722 1.6524338867326984 0.06715153115845336 0.014840772954094571 8.240182041765337e-12 11.084063193780935 -0.15565249714992335 S(ph)IKSDVPVYLK ddPTM_A549_MK2206_60min_R1 2 SIKSDVPVYLK 11 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.5)IKS(0.5)DVPVYLK;S(0.539)IKS(0.461)DVPVYLK 81.64699999999999 0.00021385 22163200.0 2609.7 2682.6 2750.6 1962.0 3308.1000000000004 2546.8 2356.1000000000004 1994.1599999999999 3441.4 3016.2 3198.3 True False 3050.1535589607893 2819.13288168898 3140.6764404622245 2442.6900880775274 2821.482872213571 2816.300685570981 2784.172872147615 2276.8382868588706 2661.928394786536 2334.8383251581236 2404.0738414105276 1.268743707627213 1.1726482078582607 1.3063976598237574 1.0160628371732303 1.173625711329291 1.1714701258587756 1.1581062212773274 0.94707502225597 1.1072573350012906 0.9712007530468441 1.0 11.231265493939436 -2.0000000000000795 0.12893153456155154 0.9719589263936672 1.9134389453148906 0.5288136186105954 0.07852703542134258 46.99468328678743 0.39470661409294827 0.21293912725303243 8.0895657006343 0.00999999999999817 2.0000000000000795 0.9414800189212233 S(ph)ILGTPLSK ddPTM_A549_MK2206_60min_R1 1 SILGTPLSK 9 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 S(1)ILGTPLSK 90.05 0.0010728 3056200.0 1654.4 2016.8 2010.5 2117.5 2478.3 1950.1 2182.6 1724.9 2959.0 2838.3 2594.9 True False 1933.6222738033991 2119.4465055507108 2295.619131661929 2636.2875950581856 2113.745352984158 2156.458287628385 2579.150167967992 1969.4098572847035 2288.7912245520324 2197.1260587150405 1950.514714403332 0.9913394959416647 1.0866088268393583 1.176929922502105 1.3515855971712747 1.0836859303728754 1.1055842192341787 1.3222920847110662 1.0096872598508706 1.1734293556725002 1.1264339830356767 1.0 10.929639166550142 -10.855490219332212 0.7267120093939275 0.9818031094513234 1.1513692871208874 0.02358592997754061 0.11360756875288092 1.1815849322660452 0.9029350009120612 0.12599875158780394 0.02020019340419453 1.3947930691697202e-11 10.855490219332212 0.16956617766956394 S(ph)ILGTPLSK ddPTM_A549_PD325901_60min_R1 1 SILGTPLSK 9 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 S(0.998)ILGT(0.002)PLSK 102.4 0.00069386 9343100.0 2694.7 3041.6 2688.6 3029.0 3733.8 3073.1 3390.5 3381.9 3726.6 3888.5 3579.5 True False 2968.2639602667064 3297.9263064961297 2871.064563865191 3216.0944506418828 3471.5507689107217 3048.073692483059 3519.5273328527906 3314.4453514507745 3569.9839616005856 3642.9794463844373 3139.2441923200363 0.9455345868054411 1.0505478721802843 0.9145719122102925 1.024480497092216 1.1058555997025183 0.9709578184264798 1.1211384388201124 1.0558099811283739 1.1372112976538515 1.1604638642947107 1.0 11.616201540834998 -6.519921249496839 23.935420896852456 1.0649876201999795 0.9767969440791806 0.35766798538743527 0.06222597483557068 66.22310377683817 535947.3935921467 0.008866373731825848 0.01876155778564293 3.0204993770978345e-07 6.519921249496839 -0.0881906761207989 S(ph)ILREPTFR ddPTM_A549_PD325901_60min_R1 1 SILREPTFR 9 1 Q9UMN6;A0A669KBI7;Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q9UMN6;Q03164-2 KMT2B;KMT2A Histone-lysine N-methyltransferase 2B;Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(1)ILREPTFR 81.92 0.00043347 3232000.0 278.86 507.89 573.39 415.14 569.74 612.74 445.51 522.51 488.13 611.84 430.71 True False 307.16966191411825 550.6916727401103 612.3036934741735 440.78225494865325 529.7234278962972 607.7500485932994 462.4641268424262 512.0881281488345 467.61559361780013 573.2083179827325 377.73540049564514 0.8131873833139968 1.4578767889308781 1.6209857288216563 1.1669074552458711 1.4023663845147187 1.608930610675729 1.2243070843654165 1.3556794716007516 1.2379448497657852 1.517486360109743 1.0 8.561232185960161 -9.787166468188213 0.6691251034631959 1.0150893307864608 1.3519282639202943 0.0 0.2592544562781438 0.6411197490094613 0.6026641070254659 0.0979200898357929 0.04682340115155995 1.6324261073282013e-10 9.787166468188213 0.3368389331338335 S(ph)INEKDYHSR ddPTM_A549_MK2206_60min_R1 2 SINEKDYHSR 10 1 F8WBF5;P49759;P49759-3;A0A087WVK0;P49759-2 F8WBF5 CLK1 Dual specificity protein kinase CLK1 1 S(1)INEKDYHSR;S(1)INEKDYHSR 68.83 0.0016451 14579900.0 2377.11 2128.79 1854.44 1599.64 2366.0 1688.2 1864.4299999999998 1451.19 2414.19 2696.5 2282.92 True False 2778.308053240327 2237.1363182027458 2117.427477005296 1991.5518718105693 2017.9645342212486 1866.844203463536 2203.1727974271776 1656.900626582985 1867.3798196692364 2087.3587771994166 1716.0079586133022 1.6190531281017275 1.3036864467753198 1.2339263733464145 1.1605726312714382 1.1759645542972634 1.0878995019184665 1.2838942770449333 0.9655553275649832 1.0882116311268493 1.2164039022792186 1.0 10.74484052853994 -2.0000000000000004 0.3675007208682556 1.0407187934896003 7.993224192881847 0.6927592849281563 0.09403580030501278 16.31296791349591 0.19743772532975504 0.018543925537319143 81.04253692206198 0.00999999999999999 2.0000000000000004 6.952505399392247 S(ph)INKLDSPDPFK ddPTM_A549_MK2206_60min_R1 1 SINKLDSPDPFK 12 1 B1AUU8;P42566-2;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 S(0.995)INKLDS(0.005)PDPFK 72.898 0.00046576 2884100.0 1518.0 1737.4 1898.5 2164.3 2164.4 1720.0 1489.3 1603.1 1993.3 2302.9 2368.1 True False 1774.2012884632254 1825.8262389645997 2167.7358475305505 2694.553597159118 1846.0196271633417 1902.0092583564028 1759.8865321885503 1830.3443342878477 1541.8207326460176 1782.6732905664892 1780.035413764898 0.996722466723663 1.025724670894525 1.2178048991427868 1.513764038806369 1.0370690453056113 1.0685232684969574 0.9886806288119114 1.02826287619556 0.8661741899757827 1.0014819237758938 1.0 10.797690228524976 -7.552253380502681 1.598584721171822 0.9436413715058085 1.1749575488905712 0.28332075815964186 0.1366538517100475 0.32252723814186424 1.6540244257143766 0.023279125981261608 0.039609596413374346 2.8037973407110895e-08 7.552253380502681 0.23131617738476273 S(ph)INKLDSPDPFK ddPTM_A549_PD325901_60min_R1 2 SINKLDSPDPFK 12 1 B1AUU8;P42566-2;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 S(0.989)INKLDS(0.011)PDPFK;S(0.971)INKLDS(0.029)PDPFK 71.344 0.00071072 8017700.0 3510.4 3495.8999999999996 3506.3999999999996 3143.1000000000004 4903.3 3505.3 3479.7 3812.1000000000004 4174.2 3946.4 4785.6 True False 3866.7732237801033 3790.511761862116 3744.3653896960896 3337.2421485019822 4558.909123466695 3476.7539989785128 3612.121887664903 3736.064674965402 3998.7728901715127 3697.223630503162 4197.0015384178705 0.9213180382196733 0.9031475750402066 0.8921524939701572 0.795149136342707 1.0862300339268522 0.8283899748793356 0.8606434509496398 0.8901747213497029 0.9527689836584898 0.8809202466713634 1.0 12.035143276708265 -9.087483376615369 1.6453107019531772 0.9844899484393276 0.8967147267870729 0.006480069638486463 0.07662431703228906 0.34867983556165894 1.931986863767146 0.01382203884038952 0.013165297797214304 8.175543306737323e-10 9.087483376615369 -0.08777522165225471 S(ph)INYSK ddPTM_A549_MK2206_60min_R1 2 SINYSK 6 0 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-4 A0A087WSW7 HELLS Lymphoid-specific helicase 1 S(0.998)INY(0.001)S(0.002)K;S(0.999)INYS(0.001)K 73.985 0.046647 39158000.0 6267.700000000001 7256.0 6332.9 6311.8 9429.8 6550.9 6967.8 6469.700000000001 11345.8 9954.3 10143.400000000001 True False 7325.534529447267 7625.299407118185 7231.000447103619 7858.191283347464 8042.688911580529 7244.1118898645145 8233.759067335917 7386.79978762528 8775.994415519583 7705.616716438403 7624.513836401694 0.9607870989062921 1.0001030322369855 0.9483883959368892 1.0306481766522773 1.0548461297535252 0.9501080390567295 1.0799061086394133 0.9688223991880641 1.1510234755716986 1.010637121497439 1.0 12.896429634267836 -8.11724591425483 1.5278994187845192 1.0679389497108935 0.9950071067152945 0.05702193517061338 0.05761663771837796 0.48215270020104956 2.2190654265678647 0.011699996806518728 0.016016625005836522 7.634033927811031e-09 8.11724591425483 -0.07293184299559907 S(ph)INYSK ddPTM_A549_PD325901_60min_R1 2 SINYSK 6 0 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-4 A0A087WSW7 HELLS Lymphoid-specific helicase 1 S(0.998)INY(0.001)S(0.002)K;S(1)INYSK 80.688 0.042709 74738000.0 23737.0 23204.0 27371.0 23886.0 28040.0 26126.0 25604.0 26271.0 30447.0 27996.0 28722.0 True False 26146.762765744188 25159.482514445088 29228.56065519384 25361.38397095806 26070.56713274858 25913.23851804769 26578.374231046408 25747.004295799197 29167.418472294605 26228.327782172735 25189.376083759205 1.0380075583770514 0.9988132469333613 1.1603527041719341 1.006828588633037 1.034982646892851 1.0287368147540261 1.055142221175647 1.022137436440894 1.1579254037617959 1.0412456304975093 1.0 14.620527767917197 S(ph)IPLSIK ddPTM_A549_MK2206_60min_R1 2 SIPLSIK 7 0 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 S(1)IPLSIK;S(1)IPLSIK 59.8 0.029432999999999997 1516480.0 786.49 863.8199999999999 838.99 943.4300000000001 1213.8400000000001 699.27 768.79 1065.8600000000001 1429.9 1140.01 1067.05 True False 919.2302841656406 907.7847483264644 957.9713977980811 1174.5703923521828 1035.2857439641252 773.2662872621412 908.4691916210538 1216.9489190593517 1106.029933081092 882.4809492286688 802.0720359181765 1.146069483788132 1.131799523826152 1.1943707733201767 1.4644200766924715 1.2907640431310836 0.9640858334836973 1.132652867745325 1.5172563866613833 1.3789658329316492 1.100251485788859 1.0 9.647588004004634 -10.97900263834348 1.2956300368479519 1.0022133179138932 1.259075608212418 0.18026566914863884 0.15616269471725922 0.5072712243874447 1.5357936655473685 0.11192767366279006 0.026728442734886546 1.0495360526905527e-11 10.97900263834348 0.2568622902985247 S(ph)IPMPASR ddPTM_A549_MK2206_60min_R1 2 SIPMPASR 8 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(1)IPMPASR;S(0.997)IPMPAS(0.003)R 72.243 0.0057469999999999995 8310500.0 3205.0 3347.1000000000004 3441.8 3036.8 3735.3 3188.3 2629.0 2899.3 3967.8 3817.4 3844.5 True False 3745.9256452731465 3517.4530933800015 3929.8989939587304 3780.8161363271315 3185.842318121989 3525.6837897777455 3106.6552696727977 3310.2846537338655 3069.0996352746024 2955.0466887005555 2889.804547197816 1.2962557100636765 1.217194116740803 1.3599186137932657 1.3083293608881994 1.1024421430893085 1.220042301198719 1.0750399270723194 1.1455046871400976 1.062044018946072 1.0225766623441725 1.0 11.49675620357348 -7.601704738879863 0.43477938665815696 1.0083295276373536 1.3228629679597026 0.7517778192766176 0.05856820478886237 0.383800898157937 0.1466158501111386 0.018414212672899166 0.046407843635115936 2.5020458341091518e-08 7.601704738879863 0.314533440322349 S(ph)IPMPASR ddPTM_A549_PD325901_60min_R1 2 SIPMPASR 8 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.999)IPMPAS(0.001)R;S(0.999)IPMPAS(0.001)R 60.518 0.011266 12059400.0 3001.0 2900.1 3481.2 3411.7 3526.0 3238.1 3643.3999999999996 3774.5 3692.5 3928.5 3716.6 True False 3305.6593107805656 3144.5016049018336 3717.4551661561813 3622.4329604671193 3278.3459240396405 3211.729987188634 3782.0515807449774 3699.2146364620316 3537.3170660146407 3680.453839557997 3259.481761468541 1.0141671445620297 0.9647244056015506 1.1405049753925613 1.111352425188921 1.0057874729639844 0.9853498875666685 1.1603229769388232 1.1349088312724203 1.085239103906175 1.1291530706095405 1.0 11.670426887280103 -10.781886591189844 1.1370396503915972 1.0015957820956087 1.068563896830005 0.0 0.07409074530083717 0.8126247721265861 1.9317236321172713 0.04056151072509722 0.011259041087929944 1.6523932370180934e-11 10.781886591189844 0.06696811473439634 S(ph)IQDLTVTGTEPGQVSSR ddPTM_A549_MK2206_60min_R1 2 SIQDLTVTGTEPGQVSSR 18 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 S(0.999)IQDLT(0.001)VTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR 199.99 1.1308e-48 36005000.0 3329.6 3637.1 2803.5 2523.2 4577.2 3259.3999999999996 2901.3 3375.8 5057.3 3954.6000000000004 4345.6 True False 3891.5550790956245 3822.21285468985 3201.078455913563 3141.3841132707507 3903.899943380175 3604.3075445853838 3428.4286549645067 3854.3299879539118 3911.829624848595 3061.2531134110186 3266.467587541377 1.1913649760182503 1.1701364707453823 0.9799816989223422 0.9617068068430538 1.1951442464238822 1.1034266981042644 1.0495829403116888 1.1799688454447548 1.1975718478789414 0.9371754139202035 1.0 11.673515608918114 -5.5510959579906 24.79209399665874 1.0904140958319652 1.1860580984538387 0.15059529439746533 0.09182671346304425 255.19167947012758 224215.16356079152 0.012902312419066995 0.049972333992814616 2.8112796054977522e-06 5.5510959579906 0.09564400262187345 S(ph)IQDLTVTGTEPGQVSSR ddPTM_A549_PD325901_60min_R1 2 SIQDLTVTGTEPGQVSSR 18 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR 279.5 7.154699999999999e-116 49068000.0 8648.599999999999 8311.599999999999 8004.599999999999 8142.599999999999 9979.4 9400.3 8815.1 9709.2 9591.099999999999 11373.0 11121.099999999999 True False 9526.599505237189 9012.047701562731 8547.840291570074 8645.549908813668 9278.481371061027 9323.747073459528 9150.56345430781 9515.542389279952 9188.019420948685 10654.906839071675 9753.275202461333 0.9767590176101111 0.9240021956202419 0.876407167247054 0.8864253011779961 0.9513195494288434 0.9559606265500015 0.9382041687902519 0.9756253352595458 0.9420445163517994 1.0924439860348456 1.0 13.251671049667918 -11.569055096171171 0.19303814563319552 1.0688141309904073 0.9131373425851861 0.4749074361969756 0.04034643226390837 9.230474580285591 0.35735780737590495 0.3548679329429741 0.040043050940321456 2.697397209156478e-12 11.569055096171171 -0.15567678840522126 S(ph)IQEAPVSEDLVIR ddPTM_A549_PD325901_60min_R1 2 SIQEAPVSEDLVIR 14 0 Q5JTV8;A0A0A0MSK5;H0YDU3;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 S(1)IQEAPVSEDLVIR;S(1)IQEAPVSEDLVIR 78.932 0.00061801 1429700.0 1035.2 1420.7 1290.0 1664.4 1586.9 1205.9 1182.9 1059.0 1188.8 1170.3 1637.3 True False 1140.2927419260388 1540.4273749470835 1377.5471574001692 1767.2062078733416 1475.4416185078014 1196.07955021487 1227.9159068077172 1037.8774142305717 1138.8388701633596 1096.4070582753523 1435.9224796998456 0.7941185948731697 1.0727789255511084 0.9593464667313526 1.230711429660705 1.027521777370751 0.832969444468123 0.8551408061139844 0.7227948784864221 0.7931060946976844 0.7635558839531066 1.0 10.487762149998945 -7.2500406532323165 23.27157382038557 0.876803350186165 1.0286816053906327 0.33470696528813426 0.12199331639283185 337.150199628506 688321.4987721619 0.019233373680352918 0.0330932669740879 5.622886882733732e-08 7.2500406532323165 0.15187825520446774 S(ph)IQEDTK ddPTM_A549_PD325901_60min_R1 2 SIQEDTK 7 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.999)IQEDT(0.001)K;S(1)IQEDTK 125.74 3.6941e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)IQEDTKK ddPTM_A549_MK2206_60min_R1 2 SIQEDTKK 8 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.999)IQEDT(0.001)KK;S(1)IQEDTKK 67.153 0.0034058 43112000.0 10436.3 14798.4 12161.3 10259.4 8209.0 5184.299999999999 4148.3 5785.8 6587.4 15465.0 14882.1 True False 12197.692296962297 15551.57535092306 13885.95520809759 12772.953460561965 7001.466974396545 5732.899184940173 4901.992413535059 6605.954868269374 5095.364417916209 11971.445759091035 11186.463844935006 1.0903975077419263 1.3902137052867234 1.2413176675473596 1.1418222628364627 0.625887418173408 0.5124853809397425 0.43820750520322627 0.5905311061511552 0.4554937546437682 1.0701724803331352 1.0 13.449466437345086 -6.68831214748109 4.530011390706381 0.6775250720063805 1.2446379643712342 0.6284912268548108 0.2022940056155275 0.12235119465340173 4.756453101833569 0.033837202621991795 0.0714618035889029 2.049688443617825e-07 6.68831214748109 0.5671128923648537 S(ph)IQEDTKK ddPTM_A549_PD325901_60min_R1 4 SIQEDTKK 8 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(1)IQEDTKK;S(1)IQEDTKK;S(0.995)IQEDT(0.005)KK;S(0.998)IQEDT(0.002)KK 62.14 0.0043927 113667000.0 17456.4 20462.6 21366.199999999997 21326.9 25208.3 22164.2 21362.6 21529.5 19011.8 21471.3 20901.1 True False 19228.56087727753 22187.055115500953 22816.23881739807 22644.214176095855 23437.75597191392 21983.70210371709 22175.565433063253 21100.077232933996 18212.800161315416 20115.598453685023 18330.397202989334 1.0489985931205965 1.2103968544600152 1.244721462646602 1.2353367974155531 1.2786278285389079 1.1993030953051018 1.2097700441235855 1.1510976548556722 0.9935845884640874 1.0973902109663263 1.0 14.161950427651702 -8.65464099516197 3.1759793537335677 0.9961886222243083 1.2087105024596805 0.5789614523338538 0.06259146946172556 0.08500459334407838 1.7007054571442115 0.00941560597571261 0.010602735847291865 2.2149248967681507e-09 8.65464099516197 0.21252188023537222 S(ph)IQEIQELDKDDESLR ddPTM_A549_MK2206_60min_R1 1 SIQEIQELDKDDESLR 16 1 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 1 S(1)IQEIQELDKDDESLR 76.533 0.00012709 2904800.0 858.22 991.83 848.43 729.91 1195.5 1384.4 943.31 949.65 1451.2 1221.7 1169.5 True False 1003.066554535513 1042.3099105515473 968.7501317462974 908.737982766905 1019.6435336692739 1530.8962891096548 1114.6972165975837 1084.2657956811524 1122.505517090203 945.7171214925004 879.0808734420201 1.1410401304808622 1.1856814794188477 1.1020034231357798 1.0337364970856018 1.1598973023686479 1.7414737771684954 1.26802578724414 1.2334084706401764 1.2769081332586154 1.0758021816463457 1.0 9.779852085913173 -4.271523618073902 16.415961876663694 1.1809466726227122 1.1676070964716767 0.0 0.19247011823295226 0.0 0.0 0.02711020530185521 0.0 5.351510500611103e-05 4.271523618073902 -0.013339576151035537 S(ph)IQEIQELDKDDESLR ddPTM_A549_PD325901_60min_R1 1 SIQEIQELDKDDESLR 16 1 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 1 S(1)IQEIQELDKDDESLR 71.07300000000001 0.00034246 3853900.0 1331.4 1387.9 1213.8 1195.6 1953.9 1506.8 1349.2 1573.2 1518.9 1226.9 1454.6 True False 1466.5627478751235 1504.8632038354742 1296.1757671723456 1269.4494965953897 1816.6648045890686 1494.5291203779477 1400.5445443105689 1541.8212918484744 1455.0659151170314 1149.4333246159356 1275.6934214691228 1.149620060113025 1.1796433049740378 1.0160558527295962 0.9951054659617651 1.4240606512628626 1.1715425471558893 1.0978692221346287 1.2086142845142775 1.1406078377682143 0.9010263008899249 1.0 10.317065942550729 -10.37650808702788 0.7600931875793334 1.000128499075665 1.154312233627449 0.3066129347086093 0.11142072042548382 0.8122726125279701 0.858612698177581 0.07004620140545005 0.021416372713706344 4.202347023847116e-11 10.37650808702788 0.15418373455178402 S(ph)ISADDDLQESSR ddPTM_A549_MK2206_60min_R1 2 SISADDDLQESSR 13 0 E9PD43;A0A0A0MSN9;A0A0A0MT02;A0A0G2JI50;A2ABK4;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.913)IS(0.087)ADDDLQESSR;S(0.753)IS(0.247)ADDDLQESSR 203.32 9.451e-31 182727000.0 2373.2 2615.33 2391.5 2530.9 3332.4 2366.8999999999996 2094.23 2626.9 3658.3 4173.3 3708.5 True False 2773.7381408306483 2748.4391260223815 2730.650660715994 3150.9706136164177 2842.2083744035886 2617.363786978937 2474.724482847798 2999.271119543853 2829.7008911046632 3230.5486315172716 2787.577100606867 0.9950354880683996 0.9859598593430958 0.9795785236295419 1.1303617801030286 1.0195981211729814 0.938938616768349 0.8877689812809267 1.0759419421586218 1.015111255752756 1.1589091583561824 1.0 11.444795993237591 -3.8971470561831514 15.60578067003143 1.0048482874085725 1.0069608957171963 0.0 0.0762962895986198 0.0 0.0 0.007670536054392264 0.0 0.0001267222699715571 3.8971470561831514 0.002112608308623809 S(ph)ISCEEATCSDTSESILEEEPQENQK ddPTM_A549_MK2206_60min_R1 2 SISCEEATCSDTSESILEEEPQENQK 26 0 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.523)IS(0.473)CEEAT(0.001)CS(0.001)DT(0.001)SESILEEEPQENQK;S(0.144)IS(0.135)CEEAT(0.144)CS(0.144)DT(0.144)S(0.144)ES(0.144)ILEEEPQENQK 75.717 2.0141999999999997e-06 5541400.0 644.1700000000001 616.7 634.13 478.94000000000005 926.34 737.02 609.4 792.49 843.01 905.54 857.98 True False 752.8901475555705 648.0873958613261 724.0591693413477 596.280321500434 790.0766131151778 815.0109672057188 720.1200917986317 904.8278843988378 652.0695810103442 700.9778850751568 644.9198869566347 1.1674165470512088 1.0049114765550784 1.1227118034120018 0.924580453417664 1.2250771438349266 1.2637398593052243 1.1166039478125964 1.4030081917130888 1.0110861739547974 1.0869224212995798 1.0 9.332976147413303 -8.946250044769133 24.999969380626236 1.0048891229975043 1.1486208897070953 0.15239807815033035 0.12190173265389068 99.44013186854751 46251.158428010945 0.02056764999442048 0.021894625740834728 1.1317485721056066e-09 8.946250044769133 0.14373176670959098 S(ph)ISESFLTVK ddPTM_A549_MK2206_60min_R1 2 SISESFLTVK 10 0 F5H527;Q76I76;J3KSQ9;K7EP00;Q76I76-3;Q76I76-4 F5H527 SSH2 Protein phosphatase Slingshot homolog 2 1 S(0.978)IS(0.022)ESFLTVK;S(1)ISESFLTVK 119.76 5.619e-05 3280500.0 1824.4 2035.29 2056.0299999999997 1863.31 4030.5 2279.3999999999996 2338.2 2159.44 3091.2 2967.7 2985.1000000000004 True False 2132.314117702442 2138.8775675735355 2347.6059702914085 2319.8210336471643 3437.618789171064 2520.604595056735 2763.020673848967 2465.5472330076427 2391.048135632051 2297.2945088428355 2243.817285431188 0.9503064850900645 0.9532316117987805 1.0462554083766566 1.033872521042359 1.5320404257026956 1.1233555474515198 1.2313928998536996 1.0988181831988364 1.0656162385220997 1.0238331453094993 1.0 11.131739486395515 -3.9406861073528714 12.506072768324488 1.0751158088429549 1.0992695018682583 0.0 0.15880837625042538 0.0 0.0 0.02122975896021658 0.0 0.00011463411768418872 3.9406861073528714 0.024153693025303458 S(ph)ISESFLTVK ddPTM_A549_PD325901_60min_R1 2 SISESFLTVK 10 0 F5H527;Q76I76;J3KSQ9;K7EP00;Q76I76-3;Q76I76-4 F5H527 SSH2 Protein phosphatase Slingshot homolog 2 1 S(1)ISESFLTVK;S(1)ISESFLTVK 121.08 4.6448e-05 4591600.0 2746.8999999999996 2439.7 2352.7 2862.2 3294.6 2558.4 3104.4 2596.8 3087.6000000000004 2991.9 3289.7 True False 3025.7632658390976 2645.302081127893 2512.368369934404 3038.9915934721685 3063.198661752977 2537.565238634815 3222.5396407928624 2545.004786849808 2957.8389094182303 2802.9909233991534 2885.0877551264753 1.0487595257588467 0.9168879097100218 0.8708117683665633 1.0533445951764286 1.0617350048746417 0.8795452526966808 1.1169641668842736 0.8821238738154921 1.0252162708612536 0.9715444247470653 1.0 11.494399486361377 -6.275876179622911 24.97937272474898 1.0067035677623297 0.9426265440091224 0.07734993671147905 0.0784847750905463 1121.9205492962801 1941208.2685484511 0.009846124194803805 0.022966808166114572 5.298144761522029e-07 6.275876179622911 -0.06407702375320734 S(ph)ISESS(ph)R ddPTM_A549_PD325901_60min_R1 1 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 2 S(0.966)IS(0.035)ES(0.35)S(0.649)R 53.516999999999996 0.051488 40067000.0 1514.1 1475.0 1366.0 1546.2 1521.5 1492.6 1517.0 1270.3 1825.8 1700.0 1561.5 True False 1667.8103173784916 1599.3034265129502 1458.7049744252956 1641.7052623250174 1414.6350888900488 1480.444760469953 1574.7302651342516 1244.9628699689276 1749.0679753905306 1592.6617098761853 1369.4453991640546 1.2178728106988177 1.1678475297293394 1.0651793604299429 1.1988103091420492 1.032998533387004 1.0810542438374362 1.1499036515771335 0.9091000420527066 1.2772089901928236 1.1629975980410667 1.0 10.419376030496847 -11.244265482732832 1.7332706088667413 0.9998083379002128 1.1416275202938044 0.0 0.1079403158595279 0.4876247196348825 2.6399869934627165 0.07703769570306347 0.015689552848936812 5.69815839318106e-12 11.244265482732832 0.1418191823935916 S(ph)ISESSR ddPTM_A549_MK2206_60min_R1 2 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 1 S(0.999)IS(0.001)ESSR;S(0.999)IS(0.001)ESSR 188.98 4.1915e-09 315160000.0 7369.0 6510.099999999999 6437.4 5526.6 5916.8 5076.200000000001 5070.2 4998.299999999999 6412.900000000001 6422.0 6663.700000000001 True False 8612.707045247367 6841.436283114679 7350.320118458346 6880.617248098504 5046.446557937567 5613.360114691151 5991.389710268167 5706.824331651766 4960.388389296969 4971.265739727298 5008.919381236076 1.7194740800803159 1.3658507479164863 1.4674462811267028 1.3736729870067383 1.0074920704138446 1.120672881204551 1.1961441688825187 1.1393324382560663 0.9903110854367292 0.9924826816638669 1.0 12.29028367620861 -2.000000127877784 0.2691503667234583 0.9748306680614267 6.105885898262883 0.8350114674286024 0.09249648638766855 11.962475290725582 0.14780833536739077 0.037418151262320565 28.96212286635848 0.009999997055505644 2.000000127877784 5.131055230201457 up S(ph)ISESSR ddPTM_A549_PD325901_60min_R1 2 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 1 S(0.992)IS(0.008)ESSR;S(0.944)IS(0.056)ESSR 156.01 0.0018365999999999999 407070000.0 7446.799999999999 7344.700000000001 6838.0 7235.2 7734.8 6787.3 7779.799999999999 7867.5 8263.8 8210.3 7761.7 True False 8202.793653955585 7963.663645226892 7302.06780023439 7682.101871668585 7191.534331611402 6732.026479122141 8075.864546269908 7710.576540565647 7916.5012241386 7691.900256821436 6807.0601054701565 1.2050420485289701 1.1699123442185104 1.072719747893286 1.1285491464215578 1.0564816852185985 0.9889770877316452 1.1863953632171016 1.1327322546145029 1.1629838875341936 1.129988590910226 1.0 12.732816133262435 -10.892039255312381 1.1263429889593455 0.9995725027425265 1.1223345163226657 0.0 0.07074190700145494 0.4616698686756634 1.0342246980438847 0.044424230703746424 0.010489981632149871 1.2822146797036277e-11 10.892039255312381 0.12276201358013916 S(ph)ISGPSVGVMEMRSPLLAGGS(ph)PPQPVVPAHK ddPTM_A549_PD325901_60min_R1 1 SISGPSVGVMEMRSPLLAGGSPPQPVVPAHK 31 1 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 2 S(0.3)IS(0.284)GPS(0.256)VGVMEMRS(0.21)PLLAGGS(0.951)PPQPVVPAHK 44.05 0.0087599 2720100.0 1335.1 1027.1 1325.6 1585.0 1540.0 1653.5 1514.1 1533.7 1663.6 1440.9 1572.0 True False 1470.638369151326 1113.657321607764 1415.5631874803596 1682.901850203824 1431.8357127115842 1640.0344442161786 1571.719904047311 1503.1091503356254 1593.6846773248362 1349.9213280944678 1378.653965729039 1.066720443061755 0.8077859631868223 1.026771925855813 1.2206847345583902 1.0385751234933143 1.1895910685237976 1.1400394465308614 1.0902729674743101 1.155971488815243 0.9791589199691764 1.0 10.429044678734881 -5.994511994171016 24.973477608735923 1.0957053823978409 0.9322595920858457 0.3321392124451791 0.09027294663039798 118.86077284399832 540867.9410061293 0.011991679568927606 0.03711445392833088 1.0127167796220028e-06 5.994511994171016 -0.16344579031199513 S(ph)ISGTSTSEKPNSMDTANTSPFK ddPTM_A549_MK2206_60min_R1 4 SISGTSTSEKPNSMDTANTSPFK 23 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.849)IS(0.145)GT(0.005)STSEKPNSMDTANTSPFK;S(0.925)IS(0.048)GT(0.01)S(0.006)T(0.006)S(0.006)EKPNSMDTANTSPFK;S(0.897)IS(0.076)GT(0.026)STSEKPNSMDTANTSPFK;S(0.974)IS(0.017)GT(0.003)S(0.003)T(0.002)SEKPNSMDTANTSPFK 180.36 3.3234e-42 95517000.0 11360.2 14237.6 12541.0 11965.7 17924.699999999997 14659.3 13604.0 15988.8 18294.800000000003 18780.5 17814.5 True False 13277.524029775968 14962.23302629353 14319.502377603698 14897.29703716069 15288.000374706513 16210.537395944208 16075.670706971747 18255.2613636464 14151.057010792343 14537.972006376282 13390.667994812198 0.9915505361584602 1.1173627060345448 1.0693643052871857 1.1125133595226309 1.1416906446063317 1.2105846700272518 1.200512977634855 1.3632823523605275 1.0567849950633332 1.0856793710372457 1.0 13.70894031099323 -8.980680863310893 24.90852522384263 1.0250520510648777 1.1528962632718023 0.20162483268874243 0.09054878022282684 115.4481281937112 148851.6001597884 0.016433034801678917 0.016724155431578014 1.04548820291984e-09 8.980680863310893 0.12784421220692455 S(ph)ISGTSTSEKPNSMDTANTSPFK ddPTM_A549_PD325901_60min_R1 2 SISGTSTSEKPNSMDTANTSPFK 23 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.856)IS(0.091)GT(0.031)S(0.008)T(0.01)S(0.003)EKPNSMDTANTSPFK;S(0.816)IS(0.079)GT(0.088)S(0.006)T(0.009)S(0.002)EKPNSMDTANTSPFK 144.78 9.12e-28 141943000.0 10082.3 10319.9 11232.8 10131.0 13914.5 11956.2 11918.7 11957.4 12577.900000000001 11875.400000000001 11458.5 True False 11105.847673803028 11189.5941906922 11995.125356313667 10756.768860829618 12937.193522419058 11858.832671265474 12372.272650662893 11718.90027660116 12049.294603825481 11125.585217331556 10049.17714141616 1.1051499558139901 1.1134836249005886 1.1936425428185138 1.070412901420279 1.2873883443750214 1.180079971164116 1.2311727096214125 1.1661552096940844 1.1990329590435957 1.107114051306663 1.0 13.294789753331754 -10.730912585310483 0.9013200566612607 0.9960649045509737 1.1740106391637999 0.2828886222498709 0.06507403888150298 0.36300199780011627 0.5053132298098956 0.04344397721101739 0.010265861980193807 1.8581784311640323e-11 10.730912585310483 0.17794573461282615 S(ph)ISLYYTGEK ddPTM_A549_MK2206_60min_R1 2 SISLYYTGEK 10 0 P19338;H7BY16 P19338 NCL Nucleolin 1 S(0.999)IS(0.001)LYYTGEK;S(0.999)ISLYYTGEK 184.55 4.8376999999999995e-14 9579200.0 6324.4 6500.0 5104.2 5043.700000000001 10068.6 7482.0 6513.9 7107.7 10118.7 9008.5 9040.8 True False 7391.804103265361 6830.822236255266 5828.052311280185 6279.406726420297 8587.522277793772 8273.740273850359 7697.391312712674 8115.238241418338 7826.830606243542 6973.47359332503 6795.719846613606 1.087714660125195 1.0051653673832879 0.8576063232189269 0.9240237779297811 1.263666318156574 1.2174928426417209 1.1326822597827342 1.1941690394229927 1.1517294389561619 1.0261567208071418 1.0 12.730410663341932 -6.724714728852294 24.99808130541973 1.1096059800708717 0.9633072107124666 0.42235298347540084 0.09232084271290016 170.99633252862466 116394.58578498029 0.015300381406909092 0.03184954111508679 1.884886791742712e-07 6.724714728852294 -0.14629876935840513 S(ph)ISNEGLTLNNSHVSK ddPTM_A549_MK2206_60min_R1 1 SISNEGLTLNNSHVSK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.549)IS(0.451)NEGLTLNNSHVSK 114.02 6.0329e-08 6140000.0 1341.7 1855.7 1593.9 1705.3 2127.8 1704.8 1486.4 1874.8 2118.6 2096.2 2679.1 True False 1568.1461585843927 1950.1472036644461 1819.9389872946776 2123.098576553826 1814.8034386796166 1885.2008044453478 1756.4596397267587 2140.5586413342003 1638.7404827090004 1622.666964125872 2013.8055306015517 0.7786979103766617 0.9683890395722123 0.9037312489409226 1.0542718968100298 0.9011810778658005 0.936138458156986 0.8722091647062266 1.0629420809539567 0.8137530947288072 0.8057714309887504 1.0 10.975708656396613 -5.251795568658169 23.931541320878626 0.9292909145601619 0.7786977607074388 0.22463443355654933 0.08166786797603665 864.3721962281497 2144894.382303766 0.011155755814363812 0.1939335262098921 5.600211529315585e-06 5.251795568658169 -0.1505931538527231 S(ph)ISSDTSSNK ddPTM_A549_MK2206_60min_R1 2 SISSDTSSNK 10 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 S(0.999)IS(0.001)SDTSSNK;S(0.997)IS(0.001)S(0.001)DTSSNK 107.85 0.00025551 6094800.0 3145.3 3506.1 2890.2 3142.3999999999996 4514.6 3259.2 2695.2 2540.8 5321.0 4876.5 4487.4 True False 3676.149744798011 3684.5455142360884 3300.073819611693 3912.2881410676964 3850.5083204544553 3604.0863807181327 3184.882952766119 2900.9661808736605 4115.801995890963 3774.895263123664 3373.0547340604717 1.0898577208596536 1.0923467908866824 0.9783635546402994 1.1598650035417888 1.1415493148014313 1.0684932990635305 0.9442132440383403 0.8600412414243535 1.2202001806642415 1.1191325254836462 1.0 11.719840013607197 S(ph)ISSTVQR ddPTM_A549_MK2206_60min_R1 1 SISSTVQR 8 0 Q6PJF5-2;Q6PJF5 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 S(0.993)IS(0.004)S(0.002)T(0.001)VQR 55.248999999999995 0.021262 26453000.0 4693.9 4689.2 4893.9 3010.5 3733.2 3407.4 2700.9 2627.7 4203.6 5501.4 5833.0 True False 5486.115565163062 4927.860250807413 5587.928609022786 3748.0726351464796 3184.0512253401375 3767.968806350938 3191.6185689841236 3000.184521993747 3251.4913117698293 4258.6299191117605 4384.505117389743 1.2512508067111456 1.1239262171830122 1.274471909465916 0.8548450816674711 0.7262053846651045 0.8593829190451826 0.7279313134623986 0.6842698187520573 0.7415868438318899 0.971290899449806 1.0 12.09819829837451 -6.270241416933988 22.94484531155336 0.8375759782526115 1.207287303368659 0.7459589645747529 0.10250175351557879 94.99296591112898 247625.76993223053 0.01764030088142585 0.04165810241624914 5.367333524638926e-07 6.270241416933988 0.36971132511604754 S(ph)ISSTVQR ddPTM_A549_PD325901_60min_R1 2 SISSTVQR 8 0 Q6PJF5-2;Q6PJF5 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 S(0.943)IS(0.039)S(0.013)T(0.005)VQR;S(0.996)IS(0.003)STVQR 74.77199999999999 0.0049632 12122000.0 4218.7 4024.6 4177.6 4039.0 5837.9 5352.3 4797.5 4946.2 8768.1 9314.9 8521.0 True False 4646.979318357206 4363.767166334929 4461.117057949572 4288.4798567654525 5427.866043661665 5308.712643349409 4980.071487792731 4847.5441607811645 8399.607248889091 8726.75562430922 7472.971019069429 0.6218382630548286 0.583940062821002 0.5969669956655462 0.5738654473330843 0.7263330782109161 0.7103884960617011 0.666411187074679 0.6486769650800552 1.1239983705884962 1.1677759223259934 1.0 12.867466212056883 -8.755322618905378 24.998790728699515 1.0585547934298383 0.6414388444470593 0.9136116519330755 0.06216701018318718 30.191738077277527 123391.45581145537 0.01117734640170695 0.012517353546787315 1.7566182121726269e-09 8.755322618905378 -0.41711594898277893 S(ph)ISTSGPLDKEDTGR ddPTM_A549_MK2206_60min_R1 2 SISTSGPLDKEDTGR 15 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.972)IS(0.02)T(0.007)S(0.001)GPLDKEDTGR;S(0.97)IS(0.02)T(0.007)S(0.003)GPLDKEDTGR 81.357 9.5667e-05 50983000.0 4294.5 5524.5 5249.5 5161.4 7713.2 6371.200000000001 5968.4 5816.6 9275.8 9234.5 9187.5 True False 5019.306609555547 5805.6734529526475 5993.958036139913 6425.943231704049 6578.598497614257 7045.396155139721 7052.781023779051 6641.120862590416 7174.846110408833 7148.420036361215 6905.990187899582 0.726804769915571 0.8406721259357031 0.8679360776738869 0.9304883234504657 0.9525930849338639 1.0201862388226963 1.0212555812976205 0.9616464376428944 1.038930828917239 1.0351042851011298 1.0 12.753632569059198 -5.32920952111552 0.5535847142611481 1.0175679025220898 0.5579361560437222 0.9376662729615173 0.023373911999055988 0.5873021575210243 0.1249910861133708 0.004477781361262922 0.1703403515709576 4.6858726227374645e-06 5.32920952111552 -0.4596317464783677 S(ph)ISTSGPLDKEDTGR ddPTM_A549_PD325901_60min_R1 2 SISTSGPLDKEDTGR 15 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.988)IS(0.008)T(0.002)S(0.002)GPLDKEDTGR;S(0.843)IS(0.112)T(0.04)S(0.004)GPLDKEDTGR 116.73 2.5363000000000003e-07 109708000.0 7302.299999999999 7314.4 7288.5 8277.9 8716.099999999999 7736.5 8706.8 8016.8 9023.5 8571.6 8924.0 True False 8043.624120330867 7930.810157889036 7783.14143931096 8789.207082525072 8103.911204912622 7673.496509028395 9038.142038543778 7856.898634942066 8644.273675066514 8030.387713161595 7826.404573896914 1.0277547045240207 1.0133401721066582 0.9944721571473256 1.1230197723025146 1.035457741597114 0.9804625401837125 1.1548268369218122 1.0038963052263943 1.1045012551353919 1.0260634544686096 1.0 12.934133974720416 S(ph)ITST(ph)PLSGK ddPTM_A549_MK2206_60min_R1 2 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 2 S(1)IT(0.001)S(0.015)T(0.982)PLS(0.002)GK;S(1)IT(0.001)S(0.042)T(0.943)PLS(0.015)GK 149.23 4.6596e-08 31073000.0 11687.400000000001 13813.4 14400.7 13221.6 23202.0 18166.1 16228.599999999999 14867.599999999999 24339.0 22401.0 22895.0 True False 13659.947390504018 14516.443058198227 16442.935801703024 16460.892593540186 19789.016535503553 20088.424644318762 19177.12655359908 16975.12783011541 18826.255361396383 17340.59854182982 17209.539630145402 0.7937427545462241 0.8435114111228308 0.9554547161099218 0.9564981369232077 1.1498864560467243 1.1672842548984 1.1143311771110436 0.986378961606888 1.0939429970816321 1.0076154803963986 1.0 14.070920884121655 -5.965459799610806 1.4531509097860034 1.0599720626286997 0.7940912390480942 0.7032241635338223 0.06212857011413869 0.22406758509540983 0.8200673877597139 0.009993795064486803 0.05858053751254112 1.082779937815357e-06 5.965459799610806 -0.2658808235806055 S(ph)ITST(ph)PLSGK ddPTM_A549_PD325901_60min_R1 2 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 2 S(0.998)IT(0.002)S(0.15)T(0.85)PLSGK;S(0.993)IT(0.007)S(0.06)T(0.937)PLS(0.003)GK 157.47 2.0467e-08 24266000.0 4601.5 5252.7 3943.5 4726.1 5900.1 5961.4 6586.700000000001 10943.8 15490.8 18239.6 18815.8 True False 5068.640892554741 5695.363463352253 4211.129624191915 5018.020463248136 5485.697330240013 5912.852334895873 6837.360472880539 10725.51732375498 14839.775546708093 17087.948543210397 16501.575883183505 0.3071610207677264 0.3451405795222448 0.2551956039837026 0.30409340894295567 0.3324347546606382 0.3583204644667645 0.4143459098260055 0.6499692756426485 0.8992944462856468 1.035534343154732 1.0 14.010316186462424 -8.475286181594296 1.3082018727097624 0.9672655879334872 0.3085087133773941 0.9858241081583405 0.03441476270287838 0.02906443284312649 0.09639711724684721 0.006402425380395509 0.007660860574708036 3.3474478388773058e-09 8.475286181594296 -0.658756874556093 down S(ph)ITSTPLSGK ddPTM_A549_MK2206_60min_R1 2 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 S(0.889)IT(0.109)S(0.002)TPLSGK;S(0.452)IT(0.26)S(0.26)T(0.028)PLSGK 152.85 2.1000999999999997e-08 68772000.0 12374.4 14572.5 16105.599999999999 13711.4 24980.0 17241.8 16137.1 19131.9 26332.0 25185.0 24258.0 True False 14462.896194966617 15314.178005819971 18389.616258092192 17070.693615528144 21305.475090805896 19066.31583181944 19069.002187994254 21843.905413986464 20367.8440435634 19495.69100825786 18234.06911325909 0.7931798494966641 0.8398661818542801 1.0085305777809075 0.9361977027450781 1.16844325632798 1.0456424023289004 1.0457897285322908 1.1979720641786118 1.117021325138705 1.0691903648693186 1.0 14.154348928553595 -5.760761987204354 1.1242792820043734 1.070588709968944 0.749345061229426 0.692048378506084 0.0665741063737513 0.3958718529480028 0.6712043554738237 0.010887853309238646 0.12121049263120333 1.7347544602964893e-06 5.760761987204354 -0.32124364873951794 S(ph)ITSTPLSGK ddPTM_A549_PD325901_60min_R1 2 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 S(0.996)IT(0.003)STPLSGK;S(0.909)IT(0.09)S(0.001)TPLSGK 148.28 3.3018e-08 28482000.0 6462.0 6836.8 7199.7 6470.1 7953.200000000001 8384.4 9143.0 12575.099999999999 15683.0 13768.1 14489.7 True False 7118.017482927027 7412.961129751684 7688.314937313182 6869.743382336758 7394.5946690505025 8316.120226238963 9490.941868241574 12324.279765524892 15023.898049101597 12898.77981632135 12707.558757776116 0.5601404344143843 0.5833505294803758 0.60501903503759 0.5406029209294796 0.5819052116934372 0.6544231181421918 0.7468737346922593 0.969838503243852 1.182280431314791 1.0150478201352577 1.0 13.63339928114881 -8.150342695330242 1.8130658804559703 1.086449064416488 0.5817966289950243 0.9437906534130752 0.052078700861551294 0.06635417646520654 0.4283217411901745 0.012107590629678883 0.016228055471168297 7.073873752175755e-09 8.150342695330242 -0.5046524354214637 down S(ph)IVVIHPDTGR ddPTM_A549_MK2206_60min_R1 2 SIVVIHPDTGR 11 0 O60437;K7EKI8;K7EQ71 O60437 PPL Periplakin 1 S(1)IVVIHPDTGR;S(1)IVVIHPDTGR 73.887 0.00044807 6892500.0 654.51 850.47 690.79 715.8 870.33 793.46 619.07 804.53 1010.27 1163.25 1196.4 True False 764.9752867668416 893.7552903489258 788.7544093313827 891.1710321334831 742.3056099191797 877.4234105438796 731.5470056281242 918.5745912697909 781.4454580696797 900.4710170877878 899.3008610397886 0.8506333307435764 0.9938334644932387 0.8770751185753453 0.9909598341795139 0.8254252187203646 0.9756728238082483 0.8134619206105238 1.0214319045660842 0.8689477481052978 1.001301184173944 1.0 9.812660039792735 -11.005999333239622 1.2371983298634024 1.0008566797443033 0.9111780029644315 0.19021236815928033 0.06946835214649294 0.593479175643941 1.5911493106848973 0.04568092733121318 0.009966357605722433 9.862809998401519e-12 11.005999333239622 -0.08967867677987174 S(ph)IVVIHPDTGR ddPTM_A549_PD325901_60min_R1 1 SIVVIHPDTGR 11 0 O60437;K7EKI8;K7EQ71 O60437 PPL Periplakin 1 S(1)IVVIHPDTGR 90.412 9.1949e-05 4284600.0 193.25 153.15 154.9 128.41 116.69 197.96 122.57 185.27 204.53 168.09 259.14 True False 212.8685977368691 166.0564879799717 165.41244548936925 136.34159405973062 108.49409695864594 196.34787939342885 127.23446842287755 181.57464450849662 195.93431537223415 157.4767687135811 227.26742282380619 0.936643690908133 0.7306656005366439 0.7278317474370654 0.5999170156711474 0.4773851685851089 0.863950833576582 0.5598447275988109 0.79894708292295 0.8621311094117361 0.6929139546571452 1.0 7.828247088629729 -9.03141932844588 1.0011481193824994 0.9637951922498733 0.6942725740258474 0.059240212611416765 0.1498092968250833 0.3027320319084679 0.6267627813711993 0.030010625922265537 0.02765494422897446 9.302092879824652e-10 9.03141932844588 -0.2695226182240259 S(ph)KDETRVSTNGSDDPEDAGAGENRR ddPTM_A549_PD325901_60min_R1 1 SKDETRVSTNGSDDPEDAGAGENRR 25 3 A0A590UK95;A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 A0A590UK95 ITCH E3 ubiquitin-protein ligase Itchy homolog 1 S(0.308)KDET(0.277)RVS(0.296)T(0.09)NGS(0.029)DDPEDAGAGENRR 42.355 0.011656999999999999 7423500.0 697.86 856.04 1030.9 630.63 729.4 777.88 857.39 656.32 818.82 863.14 1232.9 True False 768.7062334626207 928.1814950726415 1100.8630733052987 669.582582835355 678.1694602933957 771.545203185292 890.0184456318107 643.2291827269203 784.4078429232521 808.6411930956059 1081.2611159970304 0.7109348723354368 0.8584249274670029 1.0181287914808566 0.6192607622053745 0.6272023013313078 0.7135604820800853 0.8231299844821711 0.5948879259694814 0.7254564427760356 0.7478685593442045 1.0 10.07849924923698 -10.62229713425922 0.9222743919053134 0.9986148002268115 0.745838426234137 0.007891183782964162 0.1369493284991588 0.48308131545534533 0.7391628119672451 0.07943017123696369 0.022053138765383083 2.3861781562913596e-11 10.62229713425922 -0.2527763739926745 S(ph)KDEYEK ddPTM_A549_PD325901_60min_R1 1 SKDEYEK 7 1 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.997)KDEY(0.003)EK 55.31399999999999 0.011247 9026300.0 3185.6 3963.6 4451.5 3090.7 4416.5 3695.4 3409.8 3575.4 3734.8 4512.1 5312.2 True False 3508.999766885228 4297.626482255412 4753.605559044075 3281.605519511016 4106.300276097866 3665.305887605967 3539.5618049141544 3504.0858421529624 3577.839344116854 4227.205235960197 4658.833076810306 0.7531928508775169 0.9224684403584179 1.020342536568976 0.7043835796232871 0.8814010307725525 0.7867433383372984 0.7597528708492671 0.7521380964677217 0.767968992477069 0.9073527997818661 1.0 12.185752925138049 -10.826835669192631 1.0886506079571978 0.9993515137416301 0.8169159525283377 0.23352324601418872 0.09116063657102892 0.4436835099283344 0.9386874581949818 0.06079780129999753 0.015228300740769482 1.4899247372298723e-11 10.826835669192631 -0.1824355612132924 S(ph)KDRDPNR ddPTM_A549_PD325901_60min_R1 2 SKDRDPNR 8 2 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 S(1)KDRDPNR;S(1)KDRDPNR 48.44 0.011643 27294000.0 3138.0 2899.7 2384.87 2163.69 2757.2 1800.21 1647.89 2009.92 2393.8 3548.1 3335.8 True False 3456.5674499264965 3144.0678954980335 2546.721619588329 2297.3362172034776 2563.5437838236226 1785.5496866177232 1710.601355710008 1969.830568848262 2293.196910663736 3324.0723604774676 2925.5177473784543 1.1815233228456445 1.0747047760402142 0.8705199692842187 0.7852750916524476 0.8762701187237044 0.6103363031100214 0.5847174768441831 0.673327164264657 0.7838601945651027 1.1362338729464747 1.0 11.514476254819687 -5.6843605684938225 2.5754231760984156 0.8288940622469498 1.1719110850132537 0.38916306004135626 0.15432005908322788 0.24651156788045248 3.090904608427275 0.022257466973417867 0.12338215878654604 2.068423348659782e-06 5.6843605684938225 0.34301702276630386 S(ph)KDVEFQDGWPR ddPTM_A549_MK2206_60min_R1 2 SKDVEFQDGWPR 12 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR 80.387 0.0002295 15721800.0 3133.7 2451.5 1822.51 1905.77 3530.2000000000003 3039.7 2511.4 2802.0 3329.5 3278.7 3502.2 True False 3662.5919483907833 2576.270878796888 2080.969322877484 2372.6837355532666 3010.9122564276636 3361.359036410442 2967.688871911855 3199.19208076511 2575.3735661189576 2538.0393928439566 2632.5070841972147 1.3912942420467194 0.9786377762331926 0.790489543359416 0.9013019375318485 1.1437432683474977 1.2768660933862184 1.1273241731149433 1.2152643766733515 0.9782969176336784 0.9641149336613976 1.0 11.362221698276779 S(ph)KDVEFQDGWPR ddPTM_A549_PD325901_60min_R1 2 SKDVEFQDGWPR 12 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR 90.348 7.603199999999999e-05 19020400.0 4232.9 4005.8 3664.9 3765.2 4597.299999999999 3718.3999999999996 3843.1 3293.4 5376.0 5150.2 5570.3 True False 4662.620891903714 4343.382824356325 3913.6221528340157 3997.767852610372 4274.401507824005 3688.1185832315887 3989.3512735250106 3227.7105533776794 5150.0654155435905 4825.015493061367 4885.188413041007 0.9544403404087447 0.8890921817389207 0.8011200023292048 0.8183446603488892 0.8749716789660545 0.7549593324560745 0.8166217832817748 0.6607136266763649 1.0542204271580384 0.9876825794847527 1.0 12.25419849011429 -8.788569637279881 24.999446736475296 1.025604131221936 0.8221966481286452 0.5783806226923082 0.07308087581321869 99.96957204172496 92117.49077786601 0.0125834417022787 0.013397712983486361 1.6271603864503573e-09 8.788569637279881 -0.2034074830932907 S(ph)KEEDKHLK ddPTM_A549_MK2206_60min_R1 3 SKEEDKHLK 9 2 P10451-4;P10451;P10451-3;P10451-5;P10451-2 P10451-4 SPP1 Osteopontin 1 S(1)KEEDKHLK;S(1)KEEDKHLK;S(1)KEEDKHLK 68.44 0.0011417999999999999 34322300.0 9269.7 7382.349999999999 6750.49 6085.29 12302.5 9245.900000000001 7336.31 7329.110000000001 14407.8 12670.9 12251.4 True False 10834.198737593917 7758.0800824337 7707.810988357394 7576.186323179047 10492.818547023204 10224.295001068298 8669.222564265207 8368.033786958029 11144.45630452882 9808.53488967776 9209.0392585614 1.1764743784235308 0.842441851382186 0.8369831827127511 0.8226901971490311 1.1394042584049477 1.110245565688412 0.9413818663228805 0.9086760900903412 1.2101649250944513 1.0650986073882813 1.0 13.16883493835032 -6.7663675478412415 24.98679578498509 1.0777383769589333 0.9082281304496751 0.19971784369956325 0.1222705203892184 126.65402854494205 642165.6066517725 0.019222451708432373 0.037152810641782566 1.7125073816207055e-07 6.7663675478412415 -0.16951024650925817 S(ph)KEITVR ddPTM_A549_MK2206_60min_R1 1 SKEITVR 7 1 P17844-2;P17844;J3KTA4;J3QRQ7;J3QR02;J3KRX8;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 S(0.984)KEIT(0.016)VR 45.161 0.020499 6517200.0 1322.3 1689.6 1198.9 1145.9 1754.6 1192.2 1407.3 1375.2 1790.4 2202.6 2109.3 True False 1545.4719128688553 1775.5934231349065 1368.922047724192 1426.6455514414054 1496.5006643045656 1318.3578126816888 1662.9881936137424 1570.138811373369 1384.877258681297 1705.031130227864 1585.5025962815332 0.9747520543286642 1.119893103486044 0.8633994362006812 0.8998065060172755 0.9438651616303226 0.8315078233070213 1.0488713153254592 0.9903098330181251 0.8734626243622929 1.0753884189320535 1.0 10.63072452453804 -5.761378059779025 24.99999999891736 0.9361661363246465 1.0473225666779342 0.1759718515124138 0.08044534215454045 1.5566316414532846 632953.9495032163 0.009869999569588108 0.033906484579433745 1.7322953524382699e-06 5.761378059779025 0.1111564303532877 S(ph)KEITVR ddPTM_A549_PD325901_60min_R1 1 SKEITVR 7 1 P17844-2;P17844;J3KTA4;J3QRQ7;J3QR02;J3KRX8;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 S(1)KEITVR 74.16199999999999 0.0052171000000000006 8509600.0 2186.3 2644.9 2056.4 1970.4 2891.8 2519.2 2513.3 2351.6 2441.1 2838.3 2595.6 True False 2408.2515665310057 2867.7950052773563 2195.9596701377586 2092.1071328969197 2688.6899441684163 2498.6844704380987 2608.9450068305323 2304.6954932054887 2338.5090561539178 2659.0892536126935 2276.3576548640553 1.0579407683960045 1.2598174101286477 0.9646813036806827 0.9190590628087663 1.1811368650366962 1.0976677874405991 1.1461050513111655 1.0124487636118524 1.0273030036194264 1.1681333326205696 1.0 11.152511532272047 -8.29935294113034 22.508162521491727 1.0132199776355097 1.0885225796478097 0.0 0.1003087676077093 259.2813035517071 153926.69549478765 0.014504417142059264 0.01753540557708271 5.019345131006999e-09 8.29935294113034 0.07530260201229999 S(ph)KFSPQKEAS(ph)PAAK ddPTM_A549_PD325901_60min_R1 1 SKFSPQKEASPAAK 14 2 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 2 S(0.533)KFS(0.468)PQKEAS(1)PAAK 56.327 0.011791 5012100.0 2056.2 2112.2 1892.9 2476.4 2342.4 1906.1 1942.9 2609.6 1996.7 2116.0 2176.7 True False 2264.9439103055647 2290.2025067665445 2021.3635769323892 2629.3616036875405 2177.87790484131 1890.5773535654416 2016.8381226956753 2557.549480808403 1912.7856427112895 1982.3953988811813 1908.9796992381682 1.1864683061896646 1.199699770343558 1.058871174868476 1.3773648848842452 1.1408596464962162 0.990360114526063 1.056500560744858 1.3397468196382942 1.001993705577194 1.038458082960396 1.0 10.89858604535881 -8.915817344146607 24.999999999952113 1.0008713600001444 1.1629703409255072 0.2805030728240797 0.10995259885068191 21.672226622968445 6433.5467521827295 0.018584925190075274 0.019785119626787858 1.2138992856626074e-09 8.915817344146607 0.1620989809253628 S(ph)KGESDDFHMDFDSAVAPR ddPTM_A549_MK2206_60min_R1 3 SKGESDDFHMDFDSAVAPR 19 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.5)KGES(0.5)DDFHMDFDSAVAPR;S(0.5)KGES(0.5)DDFHMDFDSAVAPR;S(0.553)KGES(0.445)DDFHMDFDS(0.002)AVAPR 131.77 6.1826e-17 20719200.0 3201.75 3429.95 3546.67 3177.21 4125.38 3322.08 4137.36 3823.0299999999997 5509.46 4917.26 5325.07 True False 3742.127124728018 3604.519804499037 4049.641136877104 3955.6265926303768 3518.5420668578395 3673.620300581767 4889.064757144707 4364.9562100383455 4261.576106799743 3806.44755081461 4002.70815454459 0.93489881856095 0.9005202641133209 1.011725307097203 0.9882375731388866 0.8790403724195983 0.9177837001208335 1.2214392277372925 1.0905007413749281 1.0646732018074412 0.950968045595043 1.0 11.96676071444189 S(ph)KGESDDFHMDFDSAVAPR ddPTM_A549_PD325901_60min_R1 4 SKGESDDFHMDFDSAVAPR 19 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.741)KGES(0.259)DDFHMDFDSAVAPR;S(0.5)KGES(0.5)DDFHMDFDSAVAPR;S(0.5)KGES(0.5)DDFHMDFDSAVAPR;S(0.5)KGES(0.5)DDFHMDFDSAVAPR 110.14 2.0827000000000002e-10 24555000.0 4898.5 4889.52 5647.6 5463.599999999999 6864.6 6662.3 5461.9800000000005 5891.7 6613.6 6646.9 7046.200000000001 True False 5395.792113914895 5301.577010171935 6030.880097777672 5801.074163264111 6382.454177584377 6608.0444376785235 5669.838637810137 5774.185421550764 6335.653391413523 6227.213599632949 6179.562069541961 0.8731673949048689 0.8579211520995204 0.9759397235449551 0.9387516620079999 1.032832764807467 1.069338630037957 0.9175146351803526 0.9344004245884621 1.0252592853854339 1.0077111500062204 1.0 12.59328888614342 -5.899263123107329 1.4223498100114924 1.003211676703948 0.8521223981133487 0.5078056826661334 0.04538700637633414 0.29327035283731595 0.9945636311140018 0.006737605211465707 0.04488127910248126 1.2610632710833082e-06 5.899263123107329 -0.1510892785905994 S(ph)KGKNSDEEAPK ddPTM_A549_PD325901_60min_R1 1 SKGKNSDEEAPK 12 2 Q9UNL4-8;Q9UNL4-3;Q9UNL4-4;Q9UNL4-7;Q9UNL4-5;Q9UNL4-6;Q9UNL4-2;Q9UNL4 Q9UNL4-8 ING4 Inhibitor of growth protein 4 1 S(0.556)KGKNS(0.444)DEEAPK 63.631 0.0014192999999999999 10192000.0 3868.8 3771.4 3068.9 3739.1 3560.1 3365.8 2393.2 2849.7 3406.1 3964.6 4973.1 True False 4261.557727939972 4089.229113729452 3277.1740087948697 3970.055714887775 3310.050857678255 3338.3900407274323 2484.2745356092887 2792.8604979535985 3262.9534620318145 3714.2744793971297 4361.440227078297 0.9770987348357552 0.9375868751659593 0.7513972078416468 0.9102625527777306 0.7589352794812091 0.7654329457505371 0.5695995832260872 0.6403528083714034 0.7481366915849373 0.8516165041852013 1.0 12.09058890254519 -4.167792310855531 15.412361173086857 0.8342944950595411 11.151229708219438 0.0 0.13381965635826987 0.0 0.0 0.02071579855550212 0.0 6.795285203659314e-05 4.167792310855531 10.316935213159896 S(ph)KGPSAAGEQEPDKESGASVDEVAR ddPTM_A549_MK2206_60min_R1 2 SKGPSAAGEQEPDKESGASVDEVAR 25 2 G3V1U3;P50579-3;P50579;F8VSC4 G3V1U3 METAP2 Methionine aminopeptidase 2 1 S(0.994)KGPS(0.006)AAGEQEPDKESGASVDEVAR;S(0.981)KGPS(0.019)AAGEQEPDKESGASVDEVAR 125.42 2.6463e-18 34430000.0 5134.6 5494.5 4906.1 4980.6 7430.9 6850.2 5488.6 6534.5 8551.7 9026.3 7729.4 True False 6001.194951082528 5774.146581093008 5601.858752472813 6200.847223587633 6337.824453653703 7575.08361720525 6485.807574410845 7460.785386066959 6614.753604258739 6987.25256096239 5809.976659412352 1.032912058495174 0.9938330082167717 0.9641792180692531 1.0672757546352718 1.0908519646780714 1.3038062046141559 1.1163224836546675 1.2841334524090116 1.1385163817384054 1.2026300569801451 1.0 12.504316652522926 -6.488114997337083 3.4918597219482153 1.1070082568892257 0.9971817527985569 0.2850923599960443 0.092723247399907 0.33293204341231447 8.34077448175663 0.01520615915236865 0.03615595697051788 3.2500122854041355e-07 6.488114997337083 -0.10982650409066874 S(ph)KGPSAAGEQEPDKESGASVDEVAR ddPTM_A549_PD325901_60min_R1 2 SKGPSAAGEQEPDKESGASVDEVAR 25 2 G3V1U3;P50579-3;P50579;F8VSC4 G3V1U3 METAP2 Methionine aminopeptidase 2 1 S(0.997)KGPS(0.003)AAGEQEPDKESGASVDEVAR;S(0.976)KGPS(0.024)AAGEQEPDKESGASVDEVAR 184.42 1.1970999999999998e-57 100724000.0 13795.0 13710.8 13466.5 13192.0 16031.599999999999 14482.2 12843.2 15774.1 15067.099999999999 16036.1 16537.1 True False 15195.458244657744 14866.257234056779 14380.417670642937 14006.839878794235 14905.595722017559 14364.261764758105 13331.955004068712 15459.473200957938 14433.882184251652 15023.577909262047 14503.14153731405 1.047735637521187 1.0250370373762467 0.9915381183893596 0.9657797135025596 1.0277494488809935 0.9904241593313675 0.9192460109258342 1.065939621507755 0.9952245275353477 1.0358843889518008 1.0 13.82407781698951 -5.564777984832916 3.314212250728126 0.9961168468164838 1.0450543317848446 0.14412586759697132 0.036166135705066146 0.282044875655244 6.033809742601992 0.004313565559330155 0.024219974136674968 2.724093532813348e-06 5.564777984832916 0.04893748496836081 S(ph)KGPSAGEQEPDKESGASVDEVAR ddPTM_A549_PD325901_60min_R1 2 SKGPSAGEQEPDKESGASVDEVAR 24 2 F8VQZ7;P50579-2 F8VQZ7 METAP2 Methionine aminopeptidase 2 1 S(0.999)KGPS(0.001)AGEQEPDKESGASVDEVAR;S(0.5)KGPS(0.5)AGEQEPDKESGASVDEVAR 141.17 2.8450999999999997e-28 34523000.0 6936.5 6990.900000000001 6475.0 7562.700000000001 8160.4 7250.7 6484.4 7054.7 7482.0 8217.7 8427.3 True False 7640.688373618588 7580.047677565683 6914.4324373380605 8029.830802862119 7587.241655851694 7191.652703161924 6731.167390399831 6913.988474194913 7167.557559355872 7698.833019558547 7390.795525056188 1.0338113600511902 1.025606465754315 0.9355464393375291 1.086463666277802 1.0265798357063887 0.9730552927328144 0.910750049514955 0.9354863696005646 0.9697951370805081 1.0416785302012554 1.0 12.851513945147667 -7.265230299991733 23.77887682831522 0.9741754993218311 1.0206466599848851 0.22961263671097099 0.045297682750093674 203.28014936788261 1275093.2750101828 0.006398554041282636 0.010467494697980034 5.429623301804607e-08 7.265230299991733 0.04647116066305401 S(ph)KGQESFK ddPTM_A549_PD325901_60min_R1 2 SKGQESFK 8 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 S(1)KGQESFK;S(1)KGQESFK 46.352 0.011333 4565300.0 3056.2 2574.4 2966.6 2838.7 3761.3 3060.1 3156.6 3510.9 3238.7 3332.7 3377.3 True False 3366.463174144471 2791.3537228575865 3167.931315614996 3014.04005184454 3497.1192637805716 3035.1795601729227 3276.726140357797 3440.872345252231 3102.5887018826315 3122.272753237861 2961.91351046863 1.1365838881675627 0.9424156758770252 1.069555645165942 1.0175989410871293 1.180695942477828 1.0247360530431897 1.1062869083707165 1.1617058813806553 1.047494699260055 1.0541404204418714 1.0 11.532313798401686 -9.571367347867971 1.4753110147931776 1.0117288945777052 1.07499240536805 0.0666932199270408 0.0671021650686319 0.48885302491456345 2.162533804684866 0.015499277697365501 0.011965186330777023 2.683074008158167e-10 9.571367347867971 0.06326351079034476 S(ph)KGRDHENVK ddPTM_A549_MK2206_60min_R1 2 SKGRDHENVK 10 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)KGRDHENVK;S(1)KGRDHENVK 62.258 0.0018219000000000002 16819700.0 1961.74 1282.9 805.78 650.1 1405.52 1772.52 1236.04 1200.17 1420.0500000000002 1920.58 2027.2600000000002 True False 2292.833752061822 1348.1941302910586 920.0517204230537 809.3745291840984 1198.7698698810855 1960.0868898964484 1460.612468439089 1370.2977728664755 1098.4109423538746 1486.719644099261 1523.8353924703454 1.5046466064453492 0.8847373784286843 0.6037736916790757 0.5311430179292473 0.7866793721976202 1.2862851851202115 0.9585106604403227 0.8992426476228745 0.7208199440578686 0.9756432036199693 1.0 10.573491353311763 -4.387129553422923 17.056553385861665 0.8866080682792705 0.8802319772404429 0.0 0.2716370683241794 0.0 0.0 0.0352403496384525 0.0 4.10081754160857e-05 4.387129553422923 -0.006376091038827636 S(ph)KGRDHENVK ddPTM_A549_PD325901_60min_R1 2 SKGRDHENVK 10 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)KGRDHENVK;S(1)KGRDHENVK 72.937 0.00048426 17258000.0 1395.8700000000001 1376.95 1180.6200000000001 1014.0799999999999 1003.6700000000001 844.27 797.9699999999999 885.45 976.52 1258.95 1382.92 True False 1537.5776948148168 1492.9904089064462 1260.7439728447978 1076.7174184572207 933.1756816735297 837.3945450368266 828.3371850159389 867.7890051279123 935.4802603397745 1179.4596821462487 1212.8296070521642 1.2677606861461497 1.2309976605330613 1.039506263298677 0.8877730327463145 0.7694202683109412 0.6904469846115902 0.6829790270615581 0.7155077680178931 0.7713204352040024 0.972485891907749 1.0 10.244161162137598 -5.984225989373988 1.9250725280182288 0.8374873253728046 1.2695662575096143 0.7362570620518821 0.1023419093618883 0.18320174431154282 1.286419904431745 0.01890348638811967 0.0844753561530428 1.0369886682203492e-06 5.984225989373988 0.4320789321368097 S(ph)KGRDHENVKEK ddPTM_A549_MK2206_60min_R1 2 SKGRDHENVKEK 12 3 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)KGRDHENVKEK;S(1)KGRDHENVKEK 79.02199999999999 0.00016395 41828000.0 4672.700000000001 4270.1 4334.8 2828.7 6783.9 4440.299999999999 4523.9 3586.8 7705.6 9094.3 9004.1 True False 5461.3375234533005 4487.42985092825 4949.539821899092 3521.7316269851667 5785.997296577986 4910.169598767407 5345.834071689908 4095.2398841143126 5960.293903314681 7039.8913137343425 6768.133469482077 0.8069193002884475 0.6630232502302654 0.731300563769445 0.5203401562432046 0.8548881789443719 0.7254835651376643 0.7898535239877578 0.6050767028428143 0.8806407158177372 1.0401525539467622 1.0 12.724542303749569 -8.987249688269934 3.2114424886223856 0.952405846511296 0.7126275681336202 0.5992064688049397 0.09535627625707944 0.11878513754428735 2.467708742857408 0.01667302034103481 0.016956588433742457 1.0297938923677906e-09 8.987249688269934 -0.23977827837767585 S(ph)KGRDHENVKEK ddPTM_A549_PD325901_60min_R1 2 SKGRDHENVKEK 12 3 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)KGRDHENVKEK;S(1)KGRDHENVKEK 48.659 0.0057382 53671000.0 2621.8999999999996 2583.4 2940.1 2397.4 2847.1 2495.2 2511.1000000000004 2837.3 3246.2 2638.0 2745.1 True False 2888.0733578592335 2801.1121844430877 3139.63286625755 2545.4819531095563 2647.1295179617855 2474.8799184809236 2606.661284626645 2780.7078256812097 3109.7735029645833 2471.436229796102 2407.470102622637 1.1996299994392616 1.1635086065623939 1.3041212278554626 1.0573265065001525 1.0995482415661442 1.0280002712327982 1.0827387977890208 1.155033170568547 1.2917184307198144 1.0265698531847942 1.0 11.233302166607922 -11.142853692889902 1.5324394057027395 1.0004246049767795 1.1684167360571736 0.2750239377114142 0.08494006217588125 0.4155900304876361 1.7562123763480284 0.06975963669875133 0.015097420653027473 7.196913900939556e-12 11.142853692889902 0.167992131080394 S(ph)KGSDKDFVIVR ddPTM_A549_PD325901_60min_R1 1 SKGSDKDFVIVR 12 2 H0Y9I9;D6RF40;D6RAG5;D6R9R7;A0A0A0MTL5;Q13309-2;Q13309 H0Y9I9 SKP2 S-phase kinase-associated protein 2 1 S(0.5)KGS(0.5)DKDFVIVR 46.318999999999996 0.008031 4260800.0 1513.7 1407.7 1614.1 1611.1 2054.0 1953.8 1396.0 1453.7 1775.2 1895.1 1928.7 True False 1667.3697096729566 1526.3318193235798 1723.6425323717945 1710.6139879264244 1909.7341259153206 1937.8889005803242 1449.1255439205122 1424.7048130944113 1700.594517424291 1775.4430625802097 1691.482127036641 0.9857447992040402 0.9023635514243399 1.01901315114189 1.0113107082741106 1.129030035487896 1.145675067803034 0.8567193946407694 0.8422819196974874 1.0053872223903508 1.0496374949528213 1.0 10.724072217707773 -5.924735540957314 0.002812729692070899 1.1972747373892993 0.7894471885876844 0.0017625277665012096 0.09321050837145932 1944738.829821226 997.6229940489544 71080.4903134241 73583.05539326026 1.189226173726358e-06 5.924735540957314 -0.407827548801615 S(ph)KGSLEITESQSADAEPPPPPKPDLSR ddPTM_A549_MK2206_60min_R1 4 SKGSLEITESQSADAEPPPPPKPDLSR 27 2 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.608)KGS(0.39)LEIT(0.003)ESQSADAEPPPPPKPDLSR;S(0.54)KGS(0.46)LEIT(0.001)ESQSADAEPPPPPKPDLSR;S(0.805)KGS(0.184)LEIT(0.01)ES(0.001)QSADAEPPPPPKPDLSR;S(0.954)KGS(0.045)LEIT(0.001)ESQSADAEPPPPPKPDLSR 231.24 1.3086999999999997e-96 139708900.0 6167.42 6803.849999999999 6356.5599999999995 6422.21 7373.96 6371.16 6668.76 7036.369999999999 10063.65 8725.630000000001 10011.21 True False 7208.3297170578835 7150.136903406981 7258.015790876373 7995.651738303965 6289.260252225747 7045.351922366272 7880.38737017237 8033.796995479375 7784.249343346754 6754.504122786778 7525.150261660099 0.9578984427438765 0.9501653328885971 0.9645011114070705 1.0625238646782942 0.835765404482208 0.936240696516274 1.047206646533315 1.0675929006242946 1.0344310841215676 0.8975905979180658 1.0 12.877504674453032 -7.757336526888904 24.974422042615004 1.0234488885373503 0.9515563710621754 0.15421251439364136 0.06409476283703187 98.0544042806931 596861.481342589 0.00802024013657263 0.011656329781805677 1.7484912894816163e-08 7.757336526888904 -0.07189251747517489 S(ph)KGSLEITESQSADAEPPPPPKPDLSR ddPTM_A549_PD325901_60min_R1 6 SKGSLEITESQSADAEPPPPPKPDLSR 27 2 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.594)KGS(0.403)LEIT(0.003)ESQSADAEPPPPPKPDLSR;S(0.774)KGS(0.223)LEIT(0.004)ESQSADAEPPPPPKPDLSR;S(0.786)KGS(0.193)LEIT(0.016)ES(0.005)QSADAEPPPPPKPDLSR;S(0.53)KGS(0.347)LEIT(0.123)ESQSADAEPPPPPKPDLSR;S(0.662)KGS(0.334)LEIT(0.004)ESQSADAEPPPPPKPDLSR;S(0.659)KGS(0.34)LEIT(0.002)ESQSADAEPPPPPKPDLSR 221.13 7.929199999999999e-84 326029000.0 18888.0 19392.309999999998 20310.7 20810.6 25127.699999999997 21097.4 21162.7 23267.6 23368.5 23730.299999999996 25053.8 True False 20805.495855389312 21026.56802101786 21689.106240160967 22096.023497698236 23362.817037859004 20925.589769220667 21968.058129173784 22803.509464920924 22386.40321114776 22231.964808161658 21972.341429123542 0.9468948005610536 0.9569561846125287 0.9871094671509538 1.0056289890166534 1.0632829966355992 0.952360486328715 0.9998050594669861 1.0378279228219027 1.018844681772303 1.011815917747118 1.0 14.423400994790669 -5.882775527995503 2.223954881412055 1.0100849830645708 0.9482569752433873 0.4439353349133397 0.025671038882023118 0.21712220940646418 2.0771828554316927 0.0035103657540577066 0.016120367859716867 1.3098587693853136e-06 5.882775527995503 -0.061828007821183584 S(ph)KLS(ph)PSPSLR ddPTM_A549_PD325901_60min_R1 1 SKLSPSPSLR 10 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.37)KLS(0.661)PS(0.601)PS(0.367)LR 43.297 0.020040000000000002 21758000.0 2685.9 3176.6 3143.0 2708.0 3283.0 3076.6 2593.3 3190.1 4056.4 2942.8 3119.1 True False 2958.5705907449255 3444.3032302786683 3356.3028803943694 2875.2670096857764 3052.4134057351516 3051.5451896434797 2691.9894506082114 3126.470952914963 3885.923614510979 2756.991105778609 2735.4704736039744 1.0815582252829135 1.259126451378146 1.2269563545946267 1.0511051160781204 1.1158641393462405 1.1155467474752443 0.98410473685776 1.1429371960267758 1.4205686561080975 1.007867250764466 1.0 11.417573268159945 -8.540666511406478 24.998527277164584 1.2029782203261843 1.1213723128186137 0.0 0.12868832813651349 630.95513901521 886725.7489511238 0.027661426131091692 0.03136782052835387 2.8796087768481065e-09 8.540666511406478 -0.08160590750757057 S(ph)KLSPSPSLR ddPTM_A549_MK2206_60min_R1 1 SKLSPSPSLR 10 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.512)KLS(0.381)PS(0.107)PSLR 82.85 0.00028381 76450000.0 2205.9 2465.7 2045.1 1827.4 3011.5 2094.7 2220.5 2044.7 3343.9 2798.9 3417.3 True False 2578.201990922944 2591.1935981437846 2335.125931938229 2275.1130820351036 2568.5123393099275 2316.359763650674 2623.936107382445 2334.5424866311278 2586.5119891110317 2166.626546079529 2568.6900973180122 1.0037030133042764 1.0087606912368559 0.9090726570621931 0.8857094456083143 0.9999307981884346 0.9017669223972178 1.0215074641048039 0.9088455197723697 1.006938124537338 0.8434752593711944 1.0 11.326817129734785 -8.80822153961175 24.99967575568996 1.0032763730190146 0.9548211957440624 0.0 0.06683715785747806 142.21708621571975 75998.0348482886 0.007661764485776005 0.008156580066050854 1.5551721144615922e-09 8.80822153961175 -0.04845517727495219 S(ph)KPLTR ddPTM_A549_MK2206_60min_R1 3 SKPLTR 6 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 S(0.998)KPLT(0.002)R;S(0.945)KPLT(0.055)R;S(0.978)KPLT(0.022)R 64.711 0.016246 1533770000.0 15050.3 15690.599999999999 12738.7 10683.4 22288.5 17940.2 18042.2 19051.6 22599.9 21921.399999999998 22752.4 True False 17590.422695492805 16489.18452002875 14545.23921039633 13300.833479596056 19009.89117539741 19838.62005625904 21320.23419798043 21752.222643078014 17481.058734624352 16969.34051492649 17102.351145705183 1.0285382720556635 0.9641472321289337 0.8504818481667648 0.7777195875747306 1.1115367129022642 1.1599937276016579 1.2466259180589014 1.271884927268642 1.022143598017181 0.9922226698747152 1.0 14.06190705279407 -6.7811595651199505 24.994425612337608 1.0662925691917338 0.9055206634973496 0.41332675880300407 0.11093745858468027 250.98773967927679 318114.9573378445 0.018776805571943545 0.03551952592949381 1.6551617250183243e-07 6.7811595651199505 -0.16077190569438415 S(ph)KPLTR ddPTM_A549_PD325901_60min_R1 1 SKPLTR 6 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 S(0.998)KPLT(0.002)R 48.794 0.02852 14818000.0 2563.4 2444.6 2375.2 2245.2 2535.3 1994.9 1676.5 2229.3 2098.0 2780.6 2693.6 True False 2823.634480924659 2650.6150213244455 2536.3953552378935 2383.8809047808377 2357.2292743101816 1978.6541958069877 1740.3001249160002 2184.8348626479838 2009.828355991529 2605.0324414598363 2362.3042761372394 1.1952882232181246 1.12204640532533 1.0736954510302634 1.009133721198219 0.9978516730980328 0.8375949769867989 0.7366960058852708 0.9248744476814614 0.850791481983825 1.1027505930436268 1.0 11.205979087416559 -6.2775052938620926 1.1644188789830978 0.9080677777353826 1.1722925774680653 0.5209648031871855 0.09112913307715914 0.30879856294857455 0.7337807027740687 0.013083092697425996 0.06271490981580709 5.278307727132985e-07 6.2775052938620926 0.26422479973268265 S(ph)KS(ph)PFR ddPTM_A549_MK2206_60min_R1 2 SKSPFR 6 1 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 2 S(1)KS(1)PFR;S(1)KS(1)PFR 46.158 0.032787000000000004 54768000.0 6034.0 4593.9 4318.1 3864.0 10373.2 6777.4 5755.0 6648.799999999999 10332.5 7073.9 7452.200000000001 True False 7052.391682863706 4827.709887866621 4930.471510783076 4810.680173461554 8847.31602129495 7494.579969525986 6800.609006073396 7591.287761096024 7992.205247611986 5475.901076963082 5601.613069743154 1.258993007024506 0.8618427991649881 0.8801878047262464 0.8588026544436305 1.5794229110688323 1.3379324627057165 1.2140447620001749 1.3551967382574144 1.4267685304401874 0.9775578942681531 1.0 12.451626617656473 -6.724457837376649 24.999983858703725 1.250938684364266 0.9515362508055386 0.3616655822136956 0.19367013844687878 163.74735801866254 110694.51768346145 0.030187226146372773 0.06283843924523155 1.8860020593935582e-07 6.724457837376649 -0.2994024335587274 S(ph)KS(ph)PFR ddPTM_A549_PD325901_60min_R1 1 SKSPFR 6 1 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 2 S(1)KS(1)PFR 51.066 0.027518 39025000.0 2737.7 2289.8 2721.3 2198.5 3253.3 2200.4 2492.5 2363.9 2737.5 2904.1 2705.7 True False 3015.6292886117785 2482.7694820537986 2905.9837825062655 2334.2963518442316 3024.799431275712 2182.480671940294 2587.353451448333 2316.7501600563255 2622.4523949126847 2720.734630383193 2372.916052845459 1.2708537602902623 1.0462946968042168 1.2246466869409829 0.9837247925585412 1.2747182639051025 0.9197462629675389 1.0903687251581164 0.9763304341416618 1.1051602064759083 1.146578542936928 1.0 11.212445347568243 -2.0000000000000004 0.30739292658646145 1.0372372829787553 2.641702682942505 0.19289936462861512 0.10539344878314631 49.903858896967186 0.6240923853721445 0.028968718218230802 45.149856340541376 0.00999999999999999 2.0000000000000004 1.60446539996375 S(ph)KSATTTPSGSPR ddPTM_A549_MK2206_60min_R1 2 SKSATTTPSGSPR 13 1 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 S(0.499)KS(0.499)AT(0.002)TTPSGSPR;S(0.864)KS(0.112)AT(0.02)T(0.003)T(0.001)PSGSPR 57.52 0.0037356000000000004 8433600.0 2508.4700000000003 2871.23 2614.3999999999996 2470.79 3125.2 2172.76 1960.6100000000001 1899.51 3269.0 3466.7 3554.4 True False 2931.8384097966705 3017.363342985109 2985.1612324381736 3076.133660917977 2665.4872199274064 2402.6800210386386 2316.8274584530936 2168.7713595054015 2528.57671952031 2683.5700622722848 2671.7443835505046 1.097349891646642 1.1293607882410173 1.1173079471289715 1.1513577720448227 0.9976580231022015 0.8992926253842054 0.8671591012663574 0.8117435832777169 0.9464141611332076 1.0044262013965815 1.0 11.383566270683387 -6.89102815689357 4.367334357536911 0.9468790704771105 1.123280461951675 0.7295522180053993 0.05630900221369901 0.11252099572132457 3.799692505385864 0.00964056835428605 0.018717740456272385 1.2852033328278693e-07 6.89102815689357 0.17640139147456446 S(ph)KSDATASISLSSNLK ddPTM_A549_MK2206_60min_R1 2 SKSDATASISLSSNLK 16 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.62)KS(0.347)DAT(0.032)AS(0.001)ISLSSNLK;S(0.389)KS(0.389)DAT(0.076)AS(0.146)ISLSSNLK 151.96 1.4804999999999999e-15 57644000.0 5130.6 5499.200000000001 6372.1 4913.6 7783.3 6387.3 5986.3 6013.7 8733.9 7396.5 7683.4 True False 5996.519848873137 5779.085791017683 7275.759596549605 6117.432220579889 6638.386880475167 7063.199846453407 7073.933222077698 6866.16039118385 6755.685595172351 5725.625512907652 5775.39972894777 1.0382865481703467 1.00063823496951 1.2597845929315767 1.0592223062791246 1.1494246618466746 1.222980257288661 1.2248387218327674 1.188863232577463 1.169734721790968 0.9913816846666669 1.0 12.495705086950654 -10.69361105984054 0.9806650158776221 1.0010147382515935 1.148565192679393 0.3462976043279008 0.07890194717941214 0.5243445484453982 0.9059772562116657 0.05288688042194095 0.014263596890992093 2.0248317410553767e-11 10.69361105984054 0.14755045442779946 S(ph)KSDATASISLSSNLK ddPTM_A549_PD325901_60min_R1 1 SKSDATASISLSSNLK 16 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.478)KS(0.478)DAT(0.017)AS(0.027)IS(0.001)LSSNLK 70.453 0.00039081 70963000.0 3961.5 4347.6 4144.7 3767.9 4381.1 4864.8 3977.0 4109.4 3934.8 4286.1 4394.1 True False 4363.668563697839 4713.987509903524 4425.984266105805 4000.6346254782256 4073.3866499744972 4825.182681719299 4128.346911297902 4027.434793238066 3769.4340396355874 4015.4749145295973 3853.6535564948913 1.1323458374568665 1.2232515042662926 1.1485163887257888 1.0381407064305546 1.0570194207284853 1.2521059848742777 1.071281279122781 1.04509518933021 0.9781455401673662 1.0419916724901164 1.0 11.912011163822275 -8.278065631965477 2.269874040726594 0.9905133976397921 1.1375269574006817 0.4564453710956292 0.062206786203411094 0.17298826959227798 1.7481087877395367 0.010375662226306672 0.013213734003397131 5.271501907869545e-09 8.278065631965477 0.1470135597608896 S(ph)KSDATASISLSSNLKR ddPTM_A549_PD325901_60min_R1 1 SKSDATASISLSSNLKR 17 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.543)KS(0.451)DAT(0.005)AS(0.001)ISLSSNLKR 46.982 0.0081601 43574000.0 3228.1 2960.4 3408.4 3602.7 4901.2 3934.1 3569.6 3716.8 4595.5 4107.3 4420.0 True False 3555.8143355983807 3209.8832975247037 3639.7145203742175 3825.2305966746467 4556.956620222089 3902.061993946698 3705.443081360068 3642.6655082268085 4402.367116281733 3847.964377043799 3876.3680206885188 0.9173056625740088 0.8280646420549527 0.9389496820087101 0.9868079027220978 1.175573783474946 1.006628362715059 0.9559059051111223 0.9397109585017678 1.1356937970765186 0.9926726142891678 1.0 11.920489830755068 -6.234270534114565 2.5755012059284286 1.049877168589627 0.8764524911137382 0.3757901873606959 0.07297645885881582 0.20092170890387373 2.6051048902904466 0.011387040234812545 0.03415927602034316 5.83081773263478e-07 6.234270534114565 -0.17342467747588886 S(ph)KSDGEAKPEPSPSPR ddPTM_A549_MK2206_60min_R1 2 SKSDGEAKPEPSPSPR 16 2 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 S(0.5)KS(0.5)DGEAKPEPSPSPR;S(0.535)KS(0.465)DGEAKPEPSPSPR 67.251 0.00047185 30547800.0 4155.4 4579.2 4209.0 2887.1000000000004 4774.7 3529.9 3350.5 3581.3 4650.3 5173.6 4852.7 True False 4856.729930224034 4812.2617206554005 4805.89949025867 3594.439629606845 4072.347955006843 3903.431675042019 3959.242480425525 4088.960242271267 3597.014475003147 4004.880166778749 3647.640662293364 1.3314715948940226 1.3192806436228863 1.317536439358881 0.9854149469172025 1.1164334242415357 1.0701250579293171 1.0854255797050605 1.1209876796637184 0.9861208402972492 1.0979371428162497 1.0 11.832747897864945 -5.059007638567795 0.3855246533230997 0.9946681950556806 1.7293676139977028 0.6476197216375572 0.07529148614249796 2.1953388944327386 0.19487102773142526 0.017388304908165758 0.7675444869930977 8.729560143078345e-06 5.059007638567795 0.7346994189420222 S(ph)KSDGEAKPEPSPSPR ddPTM_A549_PD325901_60min_R1 2 SKSDGEAKPEPSPSPR 16 2 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 S(0.5)KS(0.5)DGEAKPEPSPSPR;S(0.499)KS(0.499)DGEAKPEPS(0.001)PSPR 102.37 3.7491999999999997e-07 25272000.0 2657.0 2971.3 2405.9 2701.3 3149.8 3269.8 2844.6000000000004 3264.8 3446.3999999999996 3677.0 3659.0 True False 2926.73668401998 3221.7018787782586 2569.178841851993 2868.1531659025827 2928.5689142200963 3243.1718328987336 2952.8528096248483 3199.6810028139485 3301.5597931788398 3444.8335924792527 3208.9661963120584 0.912049708527178 1.0039687805003483 0.8006250875452199 0.8937935118166221 0.9126206806372059 1.010659394488476 0.9201881942597117 0.9971064844781534 1.028854650127881 1.0735026116629922 1.0 11.647892876815362 -7.704194720682656 0.987290600916882 1.012952010297976 0.9037396691960099 0.4613348794145917 0.05465879295080592 0.3427069951990605 0.6734734376153451 0.009252120866656246 0.01637637611292147 1.976083442826304e-08 7.704194720682656 -0.1092123411019662 S(ph)KSDSYTLDPDTLRK ddPTM_A549_PD325901_60min_R1 1 SKSDSYTLDPDTLRK 15 2 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.476)KS(0.476)DS(0.024)Y(0.001)T(0.024)LDPDTLRK 54.368 0.0032961999999999996 3557900.0 1186.3 1489.5 1184.6 1312.6 1446.5 1428.8 1534.8 1770.4 1586.2 1287.0 1565.6 True False 1306.7323026920972 1615.025392400704 1264.9940795784817 1393.67632086911 1344.902830154096 1417.1643265171308 1593.2076538747867 1735.0879831480677 1519.5375301590855 1205.7386003592055 1373.041125156097 0.9517066013179603 1.1762396353693314 0.9213082233313793 1.015028825673861 0.979506589798028 1.032135382220265 1.1603495515792797 1.2636824573996723 1.1066948413408475 0.8781518472158863 1.0 10.423159122215717 -7.538600524059868 24.61146624885151 1.0793211017696218 1.0127793979498272 0.09460955146997341 0.10786911180297089 388.79096318169354 608626.1454371721 0.015159106113918163 0.022489133400393307 2.8933400320178524e-08 7.538600524059868 -0.06654170381979463 S(ph)KSEDMDNVQSK ddPTM_A549_MK2206_60min_R1 1 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 S(0.5)KS(0.5)EDMDNVQSK 66.965 0.0011431 52471000.0 3313.3 3659.1 3480.9 2941.9 3934.0 2753.7 3007.7 2640.0 3981.3 4107.8 4116.7 True False 3872.50403759236 3845.33256072025 3974.5439619010253 3662.665632066908 3355.313811338288 3045.0947062418786 3554.1601577005968 3014.228084660919 3079.541906829673 3179.8451270089977 3094.4097748599943 1.2514515915292992 1.2426707645383621 1.2844271609376146 1.1836394978530678 1.0843146368648278 0.9840631744965493 1.148574499271482 0.9740882119587078 0.9951952491389108 1.027609579326923 1.0 11.59544854189292 -6.778735795825294 1.5982850608525847 1.0059114778898017 1.2617056264641173 0.8283527970908048 0.04705596489899699 0.09822725801529932 0.506137122106093 0.006877436317778503 0.017075132136398746 1.664424899642239e-07 6.778735795825294 0.2557941485743156 S(ph)KSEDMDNVQSK ddPTM_A549_PD325901_60min_R1 4 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 S(0.5)KS(0.5)EDMDNVQSK;S(0.5)KS(0.5)EDMDNVQSK;S(0.6)KS(0.4)EDMDNVQSK;S(0.5)KS(0.5)EDMDNVQSK 81.428 0.00016723 116962900.0 20376.9 19486.9 19858.2 20750.8 24011.0 21764.100000000002 20885.300000000003 23160.0 24718.0 26897.5 25296.4 True False 22445.547887319048 21129.129452281497 21205.896869057407 22032.52978751388 22324.550193453142 21586.860385464366 21680.101520374687 22698.055631331485 23679.18841916043 25199.18725964392 22185.10316709165 1.0117396217752879 0.9524016766180049 0.9558619903338222 0.9931227103868469 1.006285615410991 0.9730340320204285 0.9772369033890247 1.0231214820312724 1.0673463287871943 1.135860720135087 1.0 14.43730364166884 -8.317387923254547 4.866722854274091 1.032333897021274 0.9803306369484166 0.4259704699116357 0.03847962169376503 0.15914908088079383 8.125171978437605 0.004806094892411706 0.005875091031012469 4.8151750138011735e-09 8.317387923254547 -0.05200326007285749 S(ph)KSEEAHAEDSVMDHHFR ddPTM_A549_PD325901_60min_R1 2 SKSEEAHAEDSVMDHHFR 18 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(0.5)KS(0.5)EEAHAEDS(0.001)VMDHHFR;S(0.583)KS(0.417)EEAHAEDSVMDHHFR 105.24 1.1637e-09 28720000.0 3126.0 2587.5 2091.6 3092.6 3742.1000000000004 3894.3 2973.7 3713.4 4439.1 4138.6 4004.2 True False 3443.349218760427 2805.557705832039 2233.548553812556 3283.6228781958043 3479.267805544168 3862.586111951051 3086.8657807710774 3639.333323894055 4252.540064386079 3877.288089702105 3511.708784715152 0.9805338169690315 0.7989152511857867 0.6360289792633609 0.9350498801289844 0.9907620531314599 1.0999164078647712 0.8790210037366367 1.0363425747984554 1.210960340132822 1.1041029673582705 1.0 11.777957496201916 -6.725394818412904 2.2669612944620154 1.0773100736782637 0.8043973715764695 0.46846565150747244 0.109706398519051 0.19636284895273057 2.055068550310312 0.018310077879055576 0.04183538215360932 1.8819374366189396e-07 6.725394818412904 -0.2729127021017942 S(ph)KSETGDSSIFR ddPTM_A549_MK2206_60min_R1 1 SKSETGDSSIFR 12 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 S(0.68)KS(0.32)ET(0.001)GDSSIFR 91.20700000000001 7.539399999999999e-05 6414700.0 2134.8 1751.2 1539.4 1611.2 2266.0 1884.4 1595.9 1714.8 2989.3 2613.9 2726.7 True False 2495.1020491510503 1840.3286000200344 1757.7100677843198 2005.9440723295163 1932.674401752048 2083.8059572365155 1885.8543723357984 1957.878151354752 2312.2283229311897 2023.4181745676092 2049.585136908384 1.2173693125598524 0.8979029789394383 0.8575930982967941 0.9787073667773097 0.9429588295450437 1.0166964619873027 0.9201151678824336 0.9552558301179117 1.1281445602298714 0.9872330444490609 1.0 11.001116203419587 -8.73712796574164 24.91886773507401 1.0605127152734628 0.9657923467589951 0.06925510386107536 0.09471949519798228 283.2296697254852 290306.3745583522 0.015790146045188417 0.01790006235027596 1.8317746067781088e-09 8.73712796574164 -0.09472036851446775 S(ph)KSISSSNPDLAVAPGSVDDEVSR ddPTM_A549_PD325901_60min_R1 2 SKSISSSNPDLAVAPGSVDDEVSR 24 1 Q96HP0;K7EP20;K7ESB7;K7EKT0 Q96HP0;K7ESB7 DOCK6 Dedicator of cytokinesis protein 6 1 S(0.464)KS(0.464)IS(0.022)S(0.022)S(0.028)NPDLAVAPGSVDDEVSR;S(0.548)KS(0.368)IS(0.028)S(0.028)S(0.028)NPDLAVAPGSVDDEVSR 134.15 2.681e-23 36206000.0 3848.1000000000004 4127.8 4107.0 5300.0 5320.7 5071.4 4093.2 5020.6 5189.8 4778.5 5296.700000000001 True False 4238.756279178508 4475.66419251536 4385.725717397287 5627.368962826668 4946.992387418522 5030.100199817312 4248.968965884981 4920.460194415492 4971.690754015649 4476.784694496086 4645.239478547711 0.9124946730418544 0.9634948237188911 0.9441333945539534 1.2114270940851495 1.0649596022474932 1.0828505662726187 0.914693200535138 1.0592479068385567 1.07027652222787 0.9637360388351193 1.0 12.181537259226376 -6.066168030351903 24.999999387193963 1.0438245714850567 0.941944557934917 0.2985849017910407 0.07219877583753039 168.5950052003983 63699.26205113218 0.009524384001858162 0.025199176254141732 8.586812298669314e-07 6.066168030351903 -0.10188001355013965 S(ph)KSKITVTSEVPFSK ddPTM_A549_MK2206_60min_R1 1 SKSKITVTSEVPFSK 15 2 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;P35268 K7EJT5 RPL22 60S ribosomal protein L22 1 S(0.312)KS(0.312)KIT(0.312)VT(0.032)S(0.032)EVPFSK 60.317 0.0011588 3648700.0 1004.6 1260.5 1560.5 933.84 1877.6 874.89 1104.4 1091.6 1734.8 1440.3 1880.2 True False 1174.1519198881133 1324.6540659691937 1781.8023650626421 1162.63084192167 1601.4075272416794 967.4702790950199 1305.0551844148483 1246.3376428847946 1341.870569906342 1114.935229668207 1413.2944491198673 0.8307907249047213 0.9372810222201929 1.2607439066729966 0.8226387945170954 1.1331025380018722 0.6845496914655785 0.9234135075161264 0.8818669341416819 0.9494628460063615 0.7888909705705954 1.0 10.464846356158429 -5.297862781836261 5.282423325211059 0.964816190728995 0.8281247403554841 0.01451812699451649 0.152572279843072 0.30508887636537235 22.746302095277265 0.017732076659429746 0.12586172570855214 5.036597182116608e-06 5.297862781836261 -0.13669145037351094 S(ph)KSKITVTSEVPFSK ddPTM_A549_PD325901_60min_R1 1 SKSKITVTSEVPFSK 15 2 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;P35268 K7EJT5 RPL22 60S ribosomal protein L22 1 S(0.462)KS(0.462)KIT(0.06)VT(0.008)S(0.008)EVPFSK 57.745 0.0020111 7130900.0 2688.1 2542.2 2693.3 3312.8 3805.2 3225.8 3605.2 3246.8 3683.4 2749.6 2704.2 True False 2960.9939331253695 2756.440115851676 2876.0835341285883 3517.4241320853175 3537.93587922735 3199.530154310581 3742.397858841135 3182.040026934673 3528.5995073685376 2575.9897867503278 2371.6005433361747 1.248521358896336 1.1622699799073837 1.2127183653292422 1.4831435850226664 1.4917924897463843 1.3491016281391732 1.5780051448194703 1.3417268080308489 1.4878557509540755 1.0861819854057864 1.0 11.211645317025427 -10.853575276534466 1.0633517969580337 0.9967847370205558 1.3805272778923945 0.5003283991416814 0.12612493777897305 0.3378315480089157 0.6687525026553285 0.0977649477386703 0.023027285369498298 1.4009567351858975e-11 10.853575276534466 0.3837425408718387 S(ph)KSLQLTGK ddPTM_A549_MK2206_60min_R1 1 SKSLQLTGK 9 1 A0A087WV04;B4DYM4;Q9UBS9;Q9UBS9-2 A0A087WV04 SUCO SUN domain-containing ossification factor 1 S(0.549)KS(0.451)LQLTGK 87.618 0.0003184 8561200.0 3190.4 3555.7 3445.4 2806.7 3525.6 2819.4 3013.8 3081.8 4117.3 4313.1 4380.1 True False 3728.8615222088774 3736.669942377359 3934.009528091527 3494.341625997552 3006.988910334078 3117.747036633746 3561.3684487409187 3518.654587616675 3184.7381239770484 3338.7677144219538 3292.400285389819 1.1325662735348054 1.1349379232406847 1.1948758313346282 1.0613355980753183 0.9133120670890876 0.9469526079404424 1.081693639909053 1.0687201684530494 0.9672997958691334 1.0140831688169547 1.0 11.684924031916223 -6.497520921017915 5.600087140981892 0.9909049998935255 1.149740497274676 0.6586490307198065 0.048668713291155886 0.082456453420234 7.905930098429997 0.007145287916784742 0.016266825956576067 3.180380478002486e-07 6.497520921017915 0.15883549738115055 S(ph)KSMDLGIADETK ddPTM_A549_MK2206_60min_R1 2 SKSMDLGIADETK 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.5)KS(0.5)MDLGIADETK;S(0.5)KS(0.5)MDLGIADETK 82.007 0.00012834 16633300.0 5031.7 4892.1 4368.9 3762.3999999999996 6240.9 5073.5 5079.5 5661.9 6922.7 6720.5 7320.5 True False 5880.927946745991 5141.086994151443 4988.475714656951 4684.188168900551 5322.8718772702405 5610.374402483263 6002.37939988702 6464.491663841535 5354.719503280281 5202.334382410044 5502.617814478244 1.0687509372852233 0.9342983953245749 0.9065640905554979 0.8512654025463522 0.9673344681989244 1.0195827861643407 1.0908225143483208 1.1748029541198466 0.9731221908945193 0.945428986313004 1.0 12.425902414109935 -7.068011020748513 5.082819227393745 1.0129148786447673 0.9343124533436394 0.22728432695594292 0.07655550101413792 0.2989702728113869 14.878527190238385 0.011819079236483994 0.02097387016247446 8.55045014806461e-08 7.068011020748513 -0.07860242530112782 S(ph)KSMDLGIADETK ddPTM_A549_PD325901_60min_R1 3 SKSMDLGIADETK 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.5)KS(0.5)MDLGIADETK;S(0.597)KS(0.403)MDLGIADETK;S(0.499)KS(0.499)MDLGIADET(0.001)K 104.03 3.2636e-05 20018700.0 8256.8 8151.2 7716.2 8843.5 9359.6 9138.199999999999 8764.9 9647.8 9557.0 9002.6 9994.2 True False 9095.024257665098 8838.130230638884 8239.867733279994 9389.74290995427 8702.213984867105 9063.781528960551 9098.453065837319 9455.36706044731 9155.35252536274 8434.174299606671 8764.976758453666 1.0376552623363327 1.0083461113704224 0.9400900835627187 1.0712798412041455 0.9928393679394498 1.0340907658675413 1.0380464565478762 1.0787669289970192 1.0445381405640994 0.9622586039913977 1.0 13.097534550146833 -6.2774865052325985 24.988359302648362 1.0284017862354515 0.9966620375518468 0.12304983404014858 0.0384052072309935 1160.9842799177413 1807866.6160292525 0.004827202385419486 0.011251037324645176 5.278536084428824e-07 6.2774865052325985 -0.03173974868360474 S(ph)KSMDLGIADETKLNTVDDQK ddPTM_A549_PD325901_60min_R1 2 SKSMDLGIADETKLNTVDDQK 21 2 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.5)KS(0.5)MDLGIADETKLNTVDDQK;S(0.5)KS(0.5)MDLGIADETKLNTVDDQK 66.447 0.00047614 18856300.0 3423.3 4414.2 4628.5 4488.4 5300.1 5859.299999999999 5409.2 5179.4 4828.8 5399.4 5575.200000000001 True False 3770.830895899736 4786.200125636245 4942.6178434315425 4765.6382741040015 4927.8392603523835 5811.5838034447215 5615.050066027814 5076.092803839301 4625.862328604334 5058.480962532628 4889.485744104671 0.7712121669331556 0.9788759751282721 1.0108666027692041 0.9746706552626738 1.0078440797775015 1.188587943108708 1.1483927676439118 1.0381649665222208 0.9460836109772502 1.034562984181254 1.0 12.255467021118877 -5.253002384583929 3.2321468161442684 1.0080984252587035 0.7349558267272631 0.4914964939778853 0.07318406411752952 0.2785077320677272 4.497840337147712 0.011620389946026556 0.19205503869136306 5.584671283488142e-06 5.253002384583929 -0.2731425985314404 S(ph)KSMSDVSAEDVQNLR ddPTM_A549_MK2206_60min_R1 1 SKSMSDVSAEDVQNLR 16 1 E9PMS6;E9PJ10 E9PMS6 LMO7 1 S(0.5)KS(0.5)MSDVSAEDVQNLR 102.48 3.1577e-07 8734500.0 2161.5 2387.4 2290.4 1930.2 2102.5 1771.5 1740.4 1867.0 2445.9 2525.7 3285.0 True False 2526.3083563987243 2508.908462590127 2615.2131604866872 2403.0990866499696 1793.2250351649093 1958.95895417347 2056.6081518975034 2131.6529674477033 1891.907555299701 1955.1426158251684 2469.2438386122567 1.0231101185286497 1.0160634698597293 1.059114988804211 0.9732125475305585 0.7262243635576802 0.7933436639754571 0.8328898587242566 0.8632816792389838 0.7661890355725155 0.7917981145693497 1.0 11.269853594770437 -6.535099084762669 24.295998992808784 0.8634735673933437 1.028604751516031 0.5957398590076997 0.07326813405726787 127.55561155041534 253600.55255940335 0.014073795543589455 0.029314851998302083 2.91676147575068e-07 6.535099084762669 0.16513118412268735 S(ph)KSMSDVSAEDVQNLR ddPTM_A549_PD325901_60min_R1 1 SKSMSDVSAEDVQNLR 16 1 E9PMS6;E9PJ10 E9PMS6 LMO7 1 S(0.699)KS(0.301)MSDVSAEDVQNLR 136.14 5.5978e-11 7707800.0 3042.4 3292.7 2900.1 2824.3 2802.3 3250.9 2921.6 3341.2 3536.7 3607.7 3417.7 True False 3351.262208303495 3570.187384731657 3096.9182257180087 2998.7505965493137 2605.4761154101757 3224.4257482324606 3032.783086760865 3274.5571448793066 3388.0647982055475 3379.909206306065 2997.3445665853283 1.118077062498477 1.1911167720029365 1.0332206247632443 1.000469091868736 0.8692614604461102 1.075760786457004 1.0118233053919155 1.0924860562860772 1.1303554606220467 1.1276345215647217 1.0 11.54946922634805 -14.999979867138622 0.003977480759185857 7.331440815833253e-07 2.0538020302172715 0.0 0.08456004990259587 301900.0798703835 93.57035165702627 25610.286213941767 22783.396831391477 1.0000463587010198e-15 14.999979867138622 2.05380129707319 S(ph)KSNPDFLKK ddPTM_A549_PD325901_60min_R1 1 SKSNPDFLKK 10 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.5)KS(0.5)NPDFLKK 52.555 0.004713 4633700.0 1318.7 3249.1 1727.5 4946.2 2567.1 2143.8 2292.9 2050.6 4645.1 2501.9 2129.5 True False 1452.5734532243694 3522.913059717442 1844.7385383013898 5251.715540364768 2386.7957520142254 2126.3416035746245 2380.157564223025 2009.6991743354201 4449.882600770374 2343.929607023074 1867.585000012715 0.7777817091133629 1.886346838132378 0.9877668423599624 2.812035618367578 1.2780118452429075 1.1385514466865754 1.2744574218612916 1.0760951572869442 2.3826934788724894 1.2550591309135144 1.0 10.866958191026612 -5.247229598718759 23.276354254132716 1.5908624378849923 0.7777802285141848 0.1018334562078298 0.5798696045861468 1595.7937654325362 2613873.6837903773 0.08668971603205503 2.302048879796789 5.659400140967303e-06 5.247229598718759 -0.8130822093708074 S(ph)KSPASVNGTPSSQLSTPK ddPTM_A549_PD325901_60min_R1 1 SKSPASVNGTPSSQLSTPK 19 1 G5E9L9;Q8N568-2;Q8N568 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 S(0.565)KS(0.423)PAS(0.011)VNGT(0.001)PSSQLSTPK 110.94 1.4694e-10 3811500.0 1820.7 2155.1 2073.4 1631.7 1949.2 1895.2 1887.4 2218.3 1911.7 2034.6 1934.0 True False 2005.5361236715003 2336.717840324107 2214.1133923670636 1732.4864031404302 1812.2949163749474 1879.7661195515575 1959.22603982491 2174.0542662773146 1831.3578971158265 1906.1350087729913 1696.1302606361082 1.1824186916630766 1.3776759335970787 1.305391126938973 1.0214347584900036 1.0684880509680155 1.1082675447619097 1.155115314722427 1.2817731731653488 1.0797271528125458 1.1238140448352851 1.0 10.728031255953116 -2.00000000342274 0.08728964156868163 0.8751001440364338 1.9764765717983679 0.1862415904616418 0.10435192015990716 104.65824246362948 0.6400023028437217 1.0757593865844903 13.850607265647957 0.009999999921188503 2.00000000342274 1.101376427761934 S(ph)KSPEILSSTK ddPTM_A549_MK2206_60min_R1 2 SKSPEILSSTK 11 1 Q4KMZ1;Q4KMZ1-3 Q4KMZ1 IQCC IQ domain-containing protein C 1 S(0.5)KS(0.5)PEILSSTK;S(0.5)KS(0.5)PEILSSTK 65.805 0.0015291999999999999 5889800.0 1773.0 1510.6 1472.4 1414.5 2210.1 1579.2 1504.0 1914.6 2422.8 2139.2 2567.1 True False 2072.239054311792 1587.483087705723 1681.2084603128706 1761.052563499317 1884.9972177017657 1746.3098958118799 1777.2573319086678 2186.0004132165895 1874.0396684165812 1655.9532342610753 1929.6182216442996 1.073911425103542 0.822692836281868 0.8712648136584501 0.9126430004369769 0.9768757345665452 0.9050028011881978 0.921040914712238 1.13286679649709 0.9711971245895689 0.8581766152943849 1.0 10.914099720640285 S(ph)KSPEKVSSFSNSSSNK ddPTM_A549_MK2206_60min_R1 2 SKSPEKVSSFSNSSSNK 17 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(0.497)KS(0.497)PEKVS(0.002)S(0.003)FSNSSSNK;S(0.604)KS(0.396)PEKVSSFSNSSSNK 146.06 4.6978999999999996e-17 25831100.0 4639.1 4351.2 4868.2 4428.8099999999995 6425.3 3733.5299999999997 3550.48 3557.23 6799.4 7373.0 6551.8 True False 5422.066664894435 4572.657494522136 5558.583962574787 5513.868648816836 5480.146881543444 4128.609666483361 4195.556257842475 4061.4782460599845 5259.346756410639 5707.434179229108 4924.807239518964 1.1009703326833238 0.9284947150477256 1.1286906658945148 1.1196110590016533 1.1127637316579975 0.8383291905018049 0.8519229390696479 0.8246979117210472 1.0679294641640331 1.1589152431043348 1.0 12.265851542219444 S(ph)KSPEKVSSFSNSSSNK ddPTM_A549_PD325901_60min_R1 2 SKSPEKVSSFSNSSSNK 17 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(0.5)KS(0.5)PEKVSSFSNSSSNK;S(0.536)KS(0.459)PEKVS(0.004)S(0.001)FSNSSSNK 71.535 0.00032661 14515400.0 2991.1000000000004 2895.6 2663.4 2611.5 3545.7 3376.7 3301.9 3485.9 3084.0 3735.2 3202.0 True False 3294.7542700685617 3139.6223741090835 2844.154340325283 2772.806423853177 3296.6622640009514 3349.201274741317 3427.5556113690104 3416.3709898643547 2954.3902048988925 3499.3588345467806 2808.174299150371 1.1732727099829268 1.1180297373489223 1.0128126096680672 0.9874053845917274 1.173952152826972 1.192661465406416 1.2205636994847637 1.2165808193950058 1.0520679595254325 1.24613306075963 1.0 11.455416768992531 -8.948546004402298 7.2277100598976 1.0226876541647658 1.1333644016064148 0.0 0.09900774423077906 0.20802472678893336 23.158761691624846 0.014283354373167963 0.015044461133352649 1.1257812096434356e-09 8.948546004402298 0.11067674744164901 S(ph)KSPPKVPIVIQDDSLPAGPPPQIR ddPTM_A549_MK2206_60min_R1 2 SKSPPKVPIVIQDDSLPAGPPPQIR 25 2 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 S(0.5)KS(0.5)PPKVPIVIQDDSLPAGPPPQIR;S(0.5)KS(0.5)PPKVPIVIQDDSLPAGPPPQIR 182.97 1.3717e-57 148787000.0 5271.4 6448.9 7701.0 8094.2 8824.900000000001 6645.4 6002.5 5592.0 9451.3 8663.9 8742.7 True False 6161.083446643638 6777.1214645210075 8793.117599069139 10077.279363362448 7526.768900274344 7348.611817140488 7093.076552381499 6384.683124781762 7310.595640624746 6706.718972660122 6571.646303755065 0.9375251134747119 1.0312669232743907 1.3380387794219413 1.533448225538896 1.145339927374594 1.1182299651369645 1.0793454523455541 0.9715500240987602 1.1124450864690394 1.0205538555579103 1.0 12.682039118944259 -7.4176113581744065 2.424403449770624 1.0494188900598291 1.2147349202824473 0.20505934642395685 0.14925002477872346 0.3911071672619419 4.503277412155323 0.024548414322538396 0.04129664824449527 3.822862184413677e-08 7.4176113581744065 0.1653160302226182 S(ph)KSPPKVPIVIQDDSLPAGPPPQIR ddPTM_A549_PD325901_60min_R1 4 SKSPPKVPIVIQDDSLPAGPPPQIR 25 2 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 S(0.587)KS(0.413)PPKVPIVIQDDSLPAGPPPQIR;S(0.58)KS(0.42)PPKVPIVIQDDSLPAGPPPQIR;S(0.59)KS(0.41)PPKVPIVIQDDSLPAGPPPQIR;S(0.5)KS(0.5)PPKVPIVIQDDSLPAGPPPQIR 170.36 3.1139999999999996e-48 269372900.0 15844.2 16983.6 18631.600000000002 18516.6 24366.1 25277.9 21280.199999999997 23103.5 22281.100000000002 18806.4 20779.2 True False 17452.69152011644 18414.867575949378 19896.05241691242 19660.328327750238 22654.709194481635 25072.045163261042 22090.029655972252 22642.682568154876 21344.702851612405 17618.96069447969 18223.490130201564 0.9577030193130959 1.0105016900923192 1.0917805686375597 1.0788453906075555 1.2431597368352765 1.3758091882580414 1.2121733816160012 1.2424997849687114 1.1712741466706256 0.9668269123311349 1.0 14.153511667522423 -5.750530674175001 1.66777633572192 1.1358780520114085 0.9548212794077656 0.2586986206257087 0.11175832122662431 0.6342082767943142 2.974803359150398 0.018422248918823676 0.13644544898614883 1.7761078175440424e-06 5.750530674175001 -0.18105677260364283 S(ph)KSPRDPDANWDS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 SKSPRDPDANWDSPSR 16 2 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 2 S(0.5)KS(0.5)PRDPDANWDS(0.567)PS(0.433)R 59.538999999999994 0.0041284 6872200.0 2135.5 2136.2 1977.3 1644.9 3493.7 2925.4 2139.2 2564.2 3356.5 3164.3 3356.2 True False 2495.9201920376936 2244.9234555520748 2257.7108724372706 2047.9005738423668 2979.781358076406 3234.963886276642 2527.8649497466886 2927.6832025331537 2596.2581092290957 2449.4824322982067 2522.762913592226 0.9893597922302138 0.8898669960053722 0.894935810366127 0.8117689390503642 1.1811579050975582 1.2823099106329792 1.0020224001736244 1.1605066757400326 1.0291328191170441 0.9709522916722787 1.0 11.300788914497236 -6.751965521502437 24.99898494747036 1.0547542414420217 0.8958998246703652 0.4437296125844845 0.09920186740244634 179.73078027121954 474258.0859059957 0.014985929036531464 0.030874021780274732 1.7702494922698809e-07 6.751965521502437 -0.15885441677165646 S(ph)KSPRDPDANWDSPSR ddPTM_A549_PD325901_60min_R1 2 SKSPRDPDANWDSPSR 16 2 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.5)KS(0.5)PRDPDANWDSPSR;S(0.5)KS(0.5)PRDPDANWDSPSR 140.17 3.5982e-12 65527000.0 4552.0 4768.1 3962.4 3904.8999999999996 4920.9 3885.9 4340.2 3966.7 5174.3 5258.5 5601.8 True False 5014.1156889947115 5169.9245206484065 4231.31229184685 4146.09680432865 4575.272960183398 3854.2545187660376 4505.3686860485695 3887.58105668405 4956.842165112951 4926.477412578776 4912.814112735965 1.020619867541117 1.0523346501643345 0.8612807638859382 0.8439352088613166 0.9312937259975853 0.7845309084205485 0.9170647581329945 0.7913145027421038 1.0089618803737856 1.0027811554700168 1.0 12.262333937203595 -8.854688334355613 24.99999991883643 1.0042332230142024 0.8999023587487539 0.25383021129135663 0.07911829412324003 16.618484925541658 4447.139530610017 0.013968083205201697 0.014870116920177373 1.3973708058446873e-09 8.854688334355613 -0.10433086426544846 S(ph)KSPSGQK ddPTM_A549_MK2206_60min_R1 2 SKSPSGQK 8 1 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 1 S(0.488)KS(0.488)PS(0.023)GQK;S(0.533)KS(0.385)PS(0.082)GQK 42.001000000000005 0.023271 8531500.0 7428.8 5022.0 3277.5 2332.4 3699.6000000000004 2632.8 2847.3 2707.7 4103.7 6715.8 8688.9 True False 8682.59982327774 5277.59834930368 3742.298783398146 2903.8381047054168 3155.393740830485 2911.401148488804 3364.6175539518276 3091.524766983473 3174.218502262309 5198.6961156743355 6531.206328559522 1.329402163473331 0.8080587388926772 0.5729873770843681 0.4446097640504135 0.48312571707199714 0.4457677497888698 0.5151601993094443 0.47334667004239606 0.4860079964679959 0.7959779333477165 1.0 12.673133770077898 -5.297252218331722 2.9098054258460544 0.6490212286260143 1.4182535987627356 0.5879152767114922 0.17532566897451912 0.28315195798424686 3.5351008449990236 0.03397839385055479 0.48702986185839214 5.043682984985753e-06 5.297252218331722 0.7692323701367213 S(ph)KSPTISDK ddPTM_A549_MK2206_60min_R1 1 SKSPTISDK 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 S(0.496)KS(0.329)PT(0.153)IS(0.022)DK 50.354 0.007894700000000001 125540000.0 5846.8 6291.8 5902.3 5056.6 7761.7 6168.1 5594.8 5592.2 7709.4 7889.3 7708.4 True False 6833.596899464284 6612.025745549363 6739.334892219945 6295.467226999399 6619.964211861818 6820.804247946585 6611.302739735784 6384.911475394238 5963.233209382034 6107.1016506431915 5794.191538982867 1.1793874699323244 1.1411472508397713 1.1631191076232512 1.0865134824494476 1.142517323999943 1.1771796292988845 1.141022469701848 1.1019503639872885 1.0291743324779423 1.0540041021348863 1.0 12.500391661326548 -8.670849148230705 1.8854904206163587 1.0110278480330868 1.1467549870074112 0.7859587440963772 0.027020170212347986 0.0814033952615666 0.5681751402695042 0.00455728430780498 0.005071056532715721 2.1337859529315395e-09 8.670849148230705 0.13572713897432442 S(ph)KSPVGNPQLIQFSR ddPTM_A549_PD325901_60min_R1 1 SKSPVGNPQLIQFSR 15 1 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 S(0.552)KS(0.448)PVGNPQLIQFSR 159.42 3.7433e-20 56365000.0 7885.2 7976.5 8528.9 9025.8 10419.0 9447.4 9065.0 9834.3 11155.0 9595.7 9759.5 True False 8685.69969922256 8648.70764852918 9107.7224424421 9583.303166920938 9687.205383598703 9370.463506675482 9409.973535558334 9638.147171640894 10686.194142557433 8989.825864387596 8559.143370567788 1.0147860975305028 1.0104641637701006 1.0640927541605043 1.1196568105021951 1.131796134752219 1.0947898756898464 1.0994059952210036 1.1260644616356659 1.2485121092028795 1.0503184109873414 1.0 13.063250698475887 -6.008784035988241 2.4932164221909563 1.1186640341923857 1.0112885036470929 0.2824605311731697 0.057910163920014586 0.37239369502550684 4.547298339771627 0.012187085862242878 0.04509626884308558 9.799771829204048e-07 6.008784035988241 -0.10737553054529281 S(ph)KSQSSSNCSNPISVPLRR ddPTM_A549_MK2206_60min_R1 2 SKSQSSSNCSNPISVPLRR 19 2 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.454)KS(0.454)QS(0.03)S(0.03)S(0.03)NCS(0.003)NPISVPLRR;S(0.498)KS(0.498)QS(0.001)S(0.001)S(0.001)NCSNPISVPLRR 102.94 4.2526999999999997e-10 27945700.0 2596.6000000000004 2993.8999999999996 2678.7 2598.0 4454.1 3687.1 3932.0 3048.0 4970.1 5231.4 4795.7 True False 3034.8425992250395 3146.276722019176 3058.5799393100283 3234.510116628651 3798.9077903105926 4077.2664747011004 4646.393503367606 3480.0633341085145 3844.3802856188086 4049.6231066349073 3604.7953354133347 0.8418904034331417 0.8728031494909866 0.8484753376322609 0.8972798219230314 1.0538483982683584 1.1310673964333653 1.2889479349137138 0.9653983126089132 1.0664628440488155 1.1233988978102603 1.0 11.815701636509294 -6.702237165082019 3.9819880581223552 1.0560908384839858 0.8589059142626786 0.6138232046726713 0.08345173035044598 0.13661837559377996 4.371545954029524 0.012601544674549041 0.026711211873434955 1.9850106213478274e-07 6.702237165082019 -0.19718492422130718 S(ph)KSQSSSNCSNPISVPLRR ddPTM_A549_PD325901_60min_R1 1 SKSQSSSNCSNPISVPLRR 19 2 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.577)KS(0.417)QS(0.003)S(0.003)S(0.001)NCSNPISVPLRR 88.036 2.1087000000000002e-06 18278000.0 3548.9 3671.6 4877.7 3683.4 4074.8 4250.7 3969.0 4226.2 3765.0 4194.1 4404.9 True False 3909.181715437901 3981.0186174813225 5208.730053992874 3910.9152523916487 3788.6001052968613 4216.0837085150915 4120.0424669201375 4141.905125610237 3606.7701431401815 3929.2838102304145 3863.1252249617337 1.0119220806456315 1.0305176212662783 1.3483202719747376 1.0123708201642334 0.9807085933473434 1.0913660476944167 1.0665050255938697 1.0721643447763887 0.9336404939283086 1.017125664175004 1.0 11.91555272860603 -8.742833328869153 18.657703769737928 0.9686637051080537 1.0790477879998248 0.15622553679565665 0.09457979768411202 14.290885455827846 14329.569227653099 0.01591405620455201 0.01799983295412198 1.8078678063875408e-09 8.742833328869153 0.11038408289177115 S(ph)KSSDPDLRR ddPTM_A549_MK2206_60min_R1 2 SKSSDPDLRR 10 2 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(0.333)KS(0.333)S(0.333)DPDLRR;S(0.462)KS(0.462)S(0.077)DPDLRR 71.548 0.00052827 34144000.0 3754.4 4109.9 4125.9 3031.77 4413.9 3314.02 3614.7000000000003 3286.21 5771.5 5464.8 6119.9 True False 4388.050933732764 4319.076355197769 4711.014660693336 3774.5537861013254 3764.6211570579735 3664.7073967315646 4271.4442005653345 3752.040331096044 4464.264465191638 4230.297884531568 4600.159929352558 0.9538909518631351 0.9388969995670673 1.024098016817511 0.8205266434361922 0.818367451322028 0.7966478237741069 0.9285425433385991 0.8156325842402004 0.9704585348666245 0.9195980030039858 1.0 12.167468303499783 -8.91620782661793 8.049142253440756 0.9870510735484243 0.8872585455198108 0.17061545232837372 0.0705842965237776 0.23273632049188273 19.63431187054635 0.012327612339475866 0.013083859816278158 1.2128083361283823e-09 8.91620782661793 -0.09979252802861349 S(ph)KSTAALSGEAASCSPIIMPYK ddPTM_A549_PD325901_60min_R1 2 SKSTAALSGEAASCSPIIMPYK 22 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 S(0.328)KS(0.267)T(0.328)AALS(0.075)GEAAS(0.001)CS(0.001)PIIMPYK;S(0.538)KS(0.386)T(0.076)AALSGEAASCSPIIMPYK 125.52 2.0375999999999998e-16 12898600.0 3165.8 2888.9 3199.8 2670.3 3580.1 3579.8 3904.6000000000004 3540.0 2900.5 2856.1000000000004 3518.6000000000004 True False 3487.1896854612173 3132.357741595432 3416.9576699605136 2835.238366308688 3328.646126674507 3550.647295678909 4053.1916896791045 3469.3919229237245 2778.6020717604524 2675.765358574926 3085.834506243129 1.1300637407502196 1.015076387038313 1.1073042520742673 0.9187914518981994 1.0786858854355708 1.1506279058372673 1.3134831701048322 1.1242961720418247 0.9004378122478386 0.8671123980114395 1.0 11.591444976698892 -8.754034981841938 24.992645649718092 0.9529845210189442 1.1032985435973968 0.4050227303764311 0.09646875214251277 149.36800022048013 504173.12554596504 0.01729294859149642 0.01941842679817799 1.7618341273042179e-09 8.754034981841938 0.1503140225784526 S(ph)KSTDNLAFLK ddPTM_A549_PD325901_60min_R1 1 SKSTDNLAFLK 11 1 A0A0A0MRY4;Q96N96-6 A0A0A0MRY4 SPATA13 Spermatogenesis-associated protein 13 1 S(0.43)KS(0.43)T(0.14)DNLAFLK 80.632 0.00023903 6704200.0 3324.1 3817.6 4153.4 4032.3 5281.6 5074.5 4064.7 3962.8 5015.5 4573.9 3933.3 True False 3661.560184926916 4139.322549868366 4435.27470042315 4281.366012982257 4910.638636530849 5033.174954445114 4219.384382789187 3883.758845243541 4804.715976871074 4285.103173413345 3449.52903524302 1.0614666951684197 1.1999674470276636 1.2857623910710707 1.2411450865438605 1.423567851251582 1.4590904738073978 1.2231769437742768 1.1258808972367236 1.3928614392812557 1.2422284693456591 1.0 11.752183688610717 -10.951885562802136 1.1511160504631963 0.9962774749415061 1.2817173716019685 0.04766481483381868 0.13532605862847225 0.3976191632758398 0.9160068947913108 0.0923102835054428 0.02035814056405597 1.117157581571173e-11 10.951885562802136 0.28543989666046243 S(ph)KSVKEDSNLTLQEK ddPTM_A549_MK2206_60min_R1 1 SKSVKEDSNLTLQEK 15 2 P46940;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(0.5)KS(0.5)VKEDSNLTLQEK 173.09 5.1591999999999995e-28 31978000.0 4736.2 5967.8 4946.0 4876.6 6049.6 4457.7 4770.4 4283.0 5994.8 6465.7 5969.8 True False 5535.5547710273595 6271.535529465257 5647.417172444614 6071.367218918891 5159.711853856659 4929.410855218222 5637.119930942223 4890.128366137392 4636.9873717284645 5005.093879376324 4487.333901901811 1.2335954693902529 1.3976083943312687 1.2585239467139138 1.3530009916012131 1.149839072967109 1.098516616543523 1.2562292118607692 1.0897625345118331 1.03335019704311 1.115382538672925 1.0 12.131642823411164 -7.63938700035572 0.4813631293213568 0.9990766556002657 1.340219637119575 0.6041629175805947 0.0772660274625831 0.3426490871379001 0.16092156624961118 0.01911860022286268 0.0455449451124709 2.294103458552516e-08 7.63938700035572 0.3411429815193092 S(ph)KSVKEDSNLTLQEK ddPTM_A549_PD325901_60min_R1 2 SKSVKEDSNLTLQEK 15 2 P46940;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(0.63)KS(0.365)VKEDS(0.006)NLTLQEK;S(0.5)KS(0.5)VKEDSNLTLQEK 145.77 2.5647000000000004e-14 71579000.0 12566.2 12713.7 13418.6 12954.699999999999 15341.9 13243.8 14257.3 15252.6 14335.400000000001 15212.8 14818.4 True False 13841.911373252498 13785.128117734033 14329.26688859683 13754.88239674163 14264.337870681728 13135.946883767894 14799.869353393919 14948.37492756678 13732.932990696358 14252.261211767303 12995.830741577098 1.0651040051613296 1.0607346611272617 1.1026049179567812 1.0584073207983637 1.0976087757934812 1.0107816225816584 1.1388167211231233 1.1502438916615756 1.056718363279469 1.0966795040020452 1.0 13.665761238711331 -9.752821009266981 1.1308692173152308 1.0102899632652824 1.0830341584485963 0.0 0.045876956252185574 0.31878252076277713 0.8331239775361916 0.011313899603702143 0.0074192030689606515 1.7667658279854585e-10 9.752821009266981 0.07274419518331388 S(ph)KSVPGLNVDMEEEEEEEDIDHLVK ddPTM_A549_MK2206_60min_R1 1 SKSVPGLNVDMEEEEEEEDIDHLVK 25 1 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 S(0.606)KS(0.394)VPGLNVDMEEEEEEEDIDHLVK 216.8 2.815199999999999e-81 5140900.0 1491.8 2370.2 1582.2 1302.6 2645.2 2126.3 1919.9 2128.1 3220.1 2751.4 2365.1 True False 1743.5793689917266 2490.8330560572663 1806.5797513630969 1621.7370584759367 2256.09458407525 2351.303654676293 2268.72097841187 2429.764692032918 2490.7524914430546 2129.85682906971 1777.7803965606859 0.9807619503313655 1.4010915301327769 1.0161996132132667 0.9122257516245357 1.269051334146735 1.3226063574697704 1.2761536704988778 1.3667406259702088 1.4010462126040386 1.1980427015564774 1.0 10.795861408402336 S(ph)KSVPGLNVDMEEEEEEEDIDHLVK ddPTM_A549_PD325901_60min_R1 2 SKSVPGLNVDMEEEEEEEDIDHLVK 25 1 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 S(0.599)KS(0.401)VPGLNVDMEEEEEEEDIDHLVK;S(0.535)KS(0.465)VPGLNVDMEEEEEEEDIDHLVK 201.88 1.7999999999999998e-68 12922000.0 2230.61 2221.23 2749.08 2240.1800000000003 2643.08 2653.3 2504.2 3104.72 3046.3900000000003 3082.69 2808.43 True False 2457.059885111708 2408.420847507362 2935.6491003609776 2378.5508307820837 2457.4391789309952 2631.6924044988127 2599.49870135082 3042.793923994277 2918.3608224065933 2888.0484273048337 2463.010914104584 0.9975838397796789 0.9778360435657801 1.1918944749898597 0.96570860370986 0.9977378357758457 1.068485888319968 1.055415015201366 1.2353960376584325 1.184875310821572 1.1725682621892766 1.0 11.266207305389612 -7.7570543070906615 2.811301949892161 1.101721704351768 1.030886872471857 0.22958878723745002 0.08382901999450715 0.4943611530822901 8.047325635897685 0.015439569345374108 0.02287788557285516 1.7496278897556096e-08 7.7570543070906615 -0.07083483187991102 S(ph)KSYDEGLDDYREDAK ddPTM_A549_MK2206_60min_R1 1 SKSYDEGLDDYREDAK 16 2 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 S(0.843)KS(0.156)YDEGLDDYREDAK 72.771 0.00015475 18320000.0 2045.4 2187.0 1786.0 1676.3 2935.5 1909.5 1867.4 1941.7 2820.3 3125.3 3039.4 True False 2390.613514771199 2298.3089585677317 2039.2816558807287 2086.9935752519664 2503.6918386333355 2111.5620225764833 2206.682407982876 2216.9419212068583 2181.5065530936467 2419.292559384882 2284.633096827427 1.0463883754861742 1.0059860210198723 0.8926079459816076 0.913491789184918 1.0958835543922156 0.9242455716450575 0.9658804343888752 0.970371095597552 0.9548607853589324 1.0589413953358424 1.0 11.157746777346132 -11.038384361197595 1.3562200975396377 0.9998919918935305 0.9707939471937539 0.07129175328215687 0.05885037655991782 1.4541079645636026 4.7965801863248325 0.03814057998203462 0.008686801621799483 9.154099713828504e-12 11.038384361197595 -0.029098044699776615 S(ph)KSYNTPLLNPVQEHEAEGAAAGGTSIR ddPTM_A549_MK2206_60min_R1 2 SKSYNTPLLNPVQEHEAEGAAAGGTSIR 28 1 P85299-2;P85299-4;P85299-3;P85299;P85299-5 P85299-2 PRR5 Proline-rich protein 5 1 S(0.485)KS(0.485)YNT(0.03)PLLNPVQEHEAEGAAAGGTSIR;S(0.438)KS(0.438)YNT(0.124)PLLNPVQEHEAEGAAAGGTSIR 138.69 3.5849e-28 58168000.0 3113.1000000000004 3616.5 2916.5 3234.7 3823.9 2834.4 2632.2 2587.3 4341.9 4524.0 5175.2 True False 3638.515172012428 3800.564402679565 3330.10355508183 4027.201645211203 3261.4093754896994 3134.3343266775532 3110.4366682513264 2954.0576982739385 3358.466582589545 3502.0252579455423 3890.055011746166 0.9353377165684793 0.9769950273720086 0.8560556457495995 1.0352557053951468 0.8383967233475497 0.8057300776501396 0.7995868076053544 0.7593871267511774 0.8633468093506467 0.9002508312532975 1.0 11.925574842087489 S(ph)KTAVYK ddPTM_A549_PD325901_60min_R1 1 SKTAVYK 7 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.545)KT(0.455)AVYK 46.158 0.018001 8719200.0 3689.5 4267.3 3768.8 3681.2 4432.8 4393.7 3805.7 4330.1 4355.6 5197.2 4457.6 True False 4064.055323933652 4626.920347090655 4024.573431635473 3908.5793633882126 4121.455420329811 4357.919163926593 3950.5279960589473 4243.732758602264 4172.549279007007 4869.0479050403 3909.343459054556 1.039574897038213 1.1835543219857279 1.0294755305559118 0.9998045462941932 1.0542576940340138 1.1147445113406642 1.0105348986180793 1.0855359226044 1.0673273716441647 1.24548992843362 1.0 11.932710624190165 -10.773866143002838 0.6006515145996824 0.9889783338587553 1.0668895156570637 0.0 0.0884317240557838 1.5627072351872273 0.7804580486304203 0.06712454559266888 0.010249001465824826 1.6831927699673764e-11 10.773866143002838 0.07791118179830836 S(ph)KTFDWAEFR ddPTM_A549_MK2206_60min_R1 1 SKTFDWAEFR 10 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.576)KT(0.424)FDWAEFR 45.79 0.011781999999999999 5570700.0 1486.2 1584.3 1393.8 1131.6 2402.1 1797.4 1532.0 1816.8 1928.2 2150.8 1760.8 True False 1737.0342258985797 1664.9341029075715 1591.461798413528 1408.8420507994542 2048.7542720426277 1987.5996749824412 1810.3445694707968 2074.3369637166497 1491.4657787026786 1664.9327862045266 1323.5447643922257 1.3124106359154608 1.2579356193306483 1.2024238554140103 1.0644460910594113 1.547929716592109 1.501724557004425 1.367800030777282 1.5672586372015829 1.126872183569524 1.2579346244998875 1.0 10.37019127456494 -8.943277683862007 7.732362715865406 1.0554467522180109 1.3475501932834206 0.26989130675589235 0.15587568832043464 0.1644518867674236 19.069623016823027 0.027000356208216884 0.028530358280412494 1.1395209554561986e-09 8.943277683862007 0.29210344106540975 S(ph)KTFDWAEFR ddPTM_A549_PD325901_60min_R1 3 SKTFDWAEFR 10 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.5)KT(0.5)FDWAEFR;S(0.5)KT(0.5)FDWAEFR;S(0.5)KT(0.5)FDWAEFR 68.809 0.0010909000000000001 13535200.0 3283.5699999999997 3344.63 3349.8 3241.0200000000004 2867.84 2775.3999999999996 2531.8199999999997 2406.21 3398.54 3009.97 3449.6400000000003 True False 3616.915609163527 3626.493708080004 3577.1375719837897 3441.2104445095274 2666.412811910903 2752.798062580938 2628.1697955650643 2358.2162539147707 3255.7111825412035 2819.9199805153057 3025.35614906967 1.1955338250922185 1.1986997660408314 1.1823856087435518 1.1374563109099525 0.8813550142619916 0.9099087601396793 0.8687141830799838 0.7794838484189531 1.0761414597558605 0.9320952117926551 1.0 11.562889273083028 -6.599106143826509 6.225360981724556 0.9857050206899249 1.1877546392045963 0.626266128842798 0.08761941007172877 0.14746575555381122 9.40268103110371 0.01510243231907096 0.031738824232882906 2.5170616696335427e-07 6.599106143826509 0.2020496185146714 S(ph)KTFDWAEFRPIQQALAQER ddPTM_A549_PD325901_60min_R1 1 SKTFDWAEFRPIQQALAQER 20 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.801)KT(0.199)FDWAEFRPIQQALAQER 300.5 2.686899999999999e-145 588660000.0 16202.0 17696.0 18657.0 17862.0 16758.0 22035.0 17883.0 18020.0 22388.0 22052.0 22703.0 True False 17846.815112718006 19187.30402411741 19923.176213655013 18965.29517245471 15580.975891961518 21855.554265680963 18563.54735095308 17660.57696358348 21447.110216367175 20659.632956582136 19910.67492617453 0.896344055582798 0.9636691922931161 1.0006278685944516 0.9525189498987285 0.7825438338847469 1.0976802316705847 0.9323414409498233 0.8869903722031504 1.077166409269876 1.0376159036890822 1.0 14.281254505486894 -8.766845566517054 24.990902957662094 1.036439693397423 0.9422509779899942 0.25666777901665294 0.07500542777841389 135.60631035372654 626858.5739349182 0.012803793265786977 0.013824472469059657 1.7106234982267164e-09 8.766845566517054 -0.09418871540742868 S(ph)KTFNPGAGLPTDK ddPTM_A549_MK2206_60min_R1 1 SKTFNPGAGLPTDK 14 1 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 S(0.76)KT(0.24)FNPGAGLPTDK 106.39 5.4126e-06 8479700.0 3170.1 4326.9 4680.6 3945.4 4793.4 3659.6 3099.1 3817.7 5868.7 5325.4 6063.5 True False 3705.135378496224 4547.120728315832 5344.379461654727 4912.023177115734 4088.297209778584 4046.8564429541243 3662.166354599835 4358.870666215904 4539.448820388139 4122.388441349073 4557.765605913371 0.8129280219432696 0.9976644526028877 1.17258760624302 1.0777261495726633 0.8969959324969048 0.8879035897992695 0.8035003708502341 0.9563613057592486 0.9959811918582503 0.9044757448694977 1.0 12.154111017101723 -5.258948627703048 23.626999101741987 0.9859524180196433 0.812927892432735 0.16024891526216656 0.09630437401554114 132.47226634789033 1256438.5011977323 0.013389717742635957 0.12441515286651914 5.508728547975947e-06 5.258948627703048 -0.17302452558690828 S(ph)KTFNPGAGLPTDK ddPTM_A549_PD325901_60min_R1 2 SKTFNPGAGLPTDK 14 1 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 S(0.707)KT(0.293)FNPGAGLPTDK;S(0.831)KT(0.169)FNPGAGLPTDK 148.64 7.610900000000001e-14 35326000.0 14700.3 14572.599999999999 15194.4 16956.7 19540.8 17682.0 15506.6 17849.0 19109.7 15521.2 17245.699999999997 True False 16192.66363421111 15800.684144544151 16225.583355349729 18004.076847540182 18168.32162010033 17538.00365444842 16096.712148537104 17492.987692730378 18306.585764771837 14541.18878313544 15124.588229499555 1.0706184782358796 1.04470177334983 1.0727950479803974 1.1903845958876662 1.201244050047205 1.1595690003805625 1.0642744056424283 1.1565926574193544 1.2103857299774943 0.9614270856494307 1.0 13.884608244756807 -6.021477445615731 23.273571062293414 1.1197930545315802 1.0579321526194652 0.0938314643372059 0.07723003540674292 591.836191972301 641335.1503341134 0.011952430569387851 0.03202273615166803 9.517492743947927e-07 6.021477445615731 -0.06186090191211502 S(ph)KTFPACDGSHNK ddPTM_A549_PD325901_60min_R1 1 SKTFPACDGSHNK 13 1 D6RCF4;Q8N5K1 D6RCF4 CISD2 CDGSH iron-sulfur domain-containing protein 2 1 S(0.49)KT(0.49)FPACDGS(0.02)HNK 44.294 0.02613 3179800.0 1556.5 1136.5 1715.4 1511.0 1877.4 1611.4 1934.6 1444.7 1612.2 1932.9 2086.5 True False 1714.5147341652605 1232.2768435470975 1831.817359538179 1604.3310382700172 1745.5379006783958 1598.277292657967 2008.2222616537404 1415.8843251547744 1544.4448405765215 1810.8563641292233 1829.873727413257 0.9369579487809412 0.6734217913981784 1.0010621673483828 0.8767441240538105 0.9539116686187522 0.8734358380658982 1.0974649406506316 0.7737606720854419 0.8440171676543916 0.9896072810931511 1.0 10.83752838173967 -10.933652936156113 1.2174019041123507 0.9994314685529584 0.8882202294319236 0.1196968047132353 0.10654343914045496 0.7569297521607812 2.010223983743013 0.06917381189989863 0.016615662041294565 1.1650567056034807e-11 10.933652936156113 -0.11121123912103481 S(ph)KTPPPPPQTAQTK ddPTM_A549_MK2206_60min_R1 1 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.575)KT(0.425)PPPPPQTAQTK 85.80799999999999 4.1639e-05 61043000.0 2292.4 2564.5 2166.3 2425.8 3440.9 2482.1 2180.8 2695.0 4018.3 3792.2 4317.2 True False 2679.301076200988 2695.022096134864 2473.5139144089712 3020.1211088983 2934.7481681326685 2744.7541745153667 2577.0231312675674 3077.024503091354 3108.1614659065344 2935.5393862027177 3245.1200913415046 0.8256400382068413 0.8304845491929901 0.762225694207342 0.9306654372996742 0.9043573382578483 0.8458097380860593 0.7941225775106056 0.9482005030572963 0.9577955140087427 0.9046011560666746 1.0 11.664056153326253 -8.419843073785975 4.548717364362824 0.9790274963497757 0.844616796300097 0.5150320745480097 0.049970757468366 0.10793793649947231 3.700513504934229 0.007861069177884655 0.009496672140579693 3.8032679724393855e-09 8.419843073785975 -0.1344107000496787 S(ph)KTPSSPCPASK ddPTM_A549_MK2206_60min_R1 1 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 S(0.47)KT(0.47)PS(0.046)S(0.014)PCPASK 44.806999999999995 0.015697 3496300.0 739.54 769.38 1114.7 803.1 980.93 931.05 966.5 766.21 1099.6 1535.9 1571.1 True False 864.3562719829337 808.5381557123197 1272.7812216182808 999.8595360525287 836.6364964301135 1029.5730930190286 1142.1005394213607 874.8226139197131 850.5423557003764 1188.9391232711237 1180.952509845881 0.7319145052629895 0.6846491700312634 1.0777581748688472 0.8466551598954766 0.7084421172357709 0.8718158303871102 0.9671011576667121 0.7407771325486078 0.720217238719765 1.0067628574042193 1.0 10.20573523484389 -10.998120092689023 1.2923535425486656 0.9994276176101148 0.8112754192657431 0.27750497112137174 0.1155387111816126 0.506717510801108 1.5138575318376983 0.08270308939574471 0.019119920856547127 1.0043380286733595e-11 10.998120092689023 -0.1881521983443717 S(ph)KTPSSPCPASK ddPTM_A549_PD325901_60min_R1 1 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 S(0.431)KT(0.431)PS(0.079)S(0.059)PCPASK 69.729 0.00096531 7958700.0 1398.5 1433.5 1446.0 1507.2 1598.3 1679.2 1670.1 1552.5 1166.9 1889.9 1962.2 True False 1540.4746904787141 1554.3060758686881 1544.134255504376 1600.2963209004438 1486.0409218356658 1665.5251519369865 1733.6565694137876 1521.534169587311 1117.8592510040578 1770.5713914676473 1720.8618394106372 0.895176274584773 0.9032137503851028 0.8973028631009755 0.9299388737962341 0.8635445843488556 0.9678436198616605 1.0074350710266968 0.8841698588123773 0.6495926781588135 1.028886428252738 1.0 10.748915558915089 -8.528303790870698 24.998039928898542 0.8309694295240285 0.9231005002442758 0.0 0.10233132392167552 267.01470962999815 1230370.0948891318 0.02151052127658806 0.024428845573181365 2.962758202315139e-09 8.528303790870698 0.09213107072024729 S(ph)KTSPVVSGSSSK ddPTM_A549_MK2206_60min_R1 4 SKTSPVVSGSSSK 13 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.333)KT(0.333)S(0.333)PVVSGSSSK;S(0.394)KT(0.394)S(0.212)PVVSGSSSK;S(0.371)KT(0.371)S(0.257)PVVS(0.001)GSSSK;S(0.399)KT(0.399)S(0.202)PVVSGSSSK 92.211 5.0026000000000005e-05 92343200.0 8483.3 9237.1 8700.7 7975.6 11570.099999999999 8804.599999999999 8419.2 7623.1 12729.9 11944.0 12184.8 True False 9915.073643227977 9707.228935155927 9934.590091445381 9929.622358038285 9868.153616818789 9736.296927979529 9948.859660110005 8703.697769764638 9846.597975473105 9245.842104531737 9158.977876627896 1.0825524176152346 1.0598594150911829 1.0846832720053525 1.084140882507964 1.07742957235442 1.0630331308938796 1.0862412590271397 0.950291384803423 1.075076073783287 1.0094840525955961 1.0 13.160970890124162 S(ph)KTSPVVSGSSSK ddPTM_A549_PD325901_60min_R1 2 SKTSPVVSGSSSK 13 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.333)KT(0.333)S(0.333)PVVS(0.002)GSSSK;S(0.333)KT(0.333)S(0.333)PVVSGSSSK 94.01 4.8485e-05 187934000.0 5690.0 5272.1 5128.1 5172.8 6283.4 6051.4 6152.1 5662.5 6260.0 5770.1 6418.0 True False 6267.644611243387 5716.3983694365625 5476.123703770397 5492.312107718831 5842.075660553227 6002.119404735275 6386.221532058293 5549.556995354686 5996.913969736397 5405.7749012685745 5628.626687054051 1.1135299887020558 1.0155938006306917 0.9729058273425001 0.9757819114831782 1.0379220341597912 1.066355922758257 1.13459674750623 0.985952223145083 1.0654311083606618 0.9604074318344757 1.0 12.458567250758081 -5.255146181688178 23.999731767622848 1.029978124941317 1.1135300555742054 0.2014788791951453 0.05015145772044594 500.0071772082451 1906732.1547622473 0.006543839488926563 0.0803237647542261 5.557171737330389e-06 5.255146181688178 0.08355193063288846 S(ph)KVGSTENIKHQPGGGR ddPTM_A549_MK2206_60min_R1 2 SKVGSTENIKHQPGGGR 17 2 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.497)KVGS(0.497)T(0.006)ENIKHQPGGGR;S(0.493)KVGS(0.493)T(0.014)ENIKHQPGGGR 55.763000000000005 0.0021605 23687600.0 1719.63 2367.5 2148.4 2186.0 3004.5 1655.63 2168.1000000000004 1911.45 3900.2000000000003 4232.8 4649.4 True False 2009.8615030830135 2487.995637589897 2453.0754252486895 2721.5700981332707 2562.5420300370824 1830.827667681751 2562.01570565903 2182.403891070119 3016.8109273395853 3276.607540192727 3494.8256630879237 0.5750963558242731 0.7119083689546843 0.7019163934721783 0.7787427358332297 0.7332388728577942 0.5238680964887062 0.7330882718182027 0.6244671698850385 0.8632221513086925 0.9375596542053586 1.0 11.771004774233695 -9.075531902552644 1.4477813639914923 0.9578746423220563 0.6760616295783419 0.6878590833992904 0.07769553157842754 0.1403163632195688 0.6016855120454503 0.016851880382287233 0.015950739320157885 8.403652729927733e-10 9.075531902552644 -0.2818130127437144 S(ph)KVGSTENIKHQPGGGR ddPTM_A549_PD325901_60min_R1 1 SKVGSTENIKHQPGGGR 17 2 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.458)KVGS(0.458)T(0.084)ENIKHQPGGGR 51.348 0.0036414999999999998 42767000.0 1672.1 1280.1 1277.4 2052.1 1389.1 2173.0 1954.0 2885.6 2095.0 1691.4 2721.0 True False 1841.850361065039 1387.978519511341 1364.0920456302144 2178.8535563427545 1291.5344081348446 2155.3038084558534 2028.3605392698266 2828.0444442905937 2006.9544355587468 1584.60471534387 2386.3342498401503 0.7718325130640924 0.58163625636447 0.5716265630942475 0.9130546387157231 0.541221083434292 0.9031860514092808 0.8499901216293138 1.1850998846787837 0.8410198343728184 0.6640330102331706 1.0 11.220580417725953 -7.392566413655754 5.977841389326202 0.9388953815361473 0.6785886747570785 0.3504781989871725 0.15405872171682589 0.1552067995881867 6.950483171943224 0.01926846046709853 0.030913530324575642 4.04980009604968e-08 7.392566413655754 -0.26030670677906875 S(ph)LAADDEGGPELEPDYGTATR ddPTM_A549_MK2206_60min_R1 1 SLAADDEGGPELEPDYGTATR 21 0 C9JJX6;E9PDC3;O00192-2;O00192 C9JJX6 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome 1 S(1)LAADDEGGPELEPDYGTATR 49.606 0.013133 508540.0 188.24 230.28 196.65 187.51 0.0 280.3 311.29 343.03 277.03 365.18 358.45 True False 220.01030997385874 242.00026839459417 224.5379270038888 233.44995841764373 0.0 309.9611599519185 367.847363596974 391.6555529853164 214.28314732600518 282.6855843714753 269.4369722832766 0.816555753686794 0.8981702338169224 0.8333597468123918 0.8664362445856266 0.0 1.150403217959398 1.3652445708535952 1.4536073118188972 0.795299715217685 1.0491714703291335 1.0 8.073804021532302 S(ph)LAALSQIAYQR ddPTM_A549_MK2206_60min_R1 2 SLAALSQIAYQR 12 0 E7EX44;Q05682-3;Q05682-5;E9PGZ1 E7EX44;Q05682-5 CALD1 Caldesmon 1 S(1)LAALSQIAYQR;S(1)LAALSQIAYQR 234.83 2.2188e-50 12130200.0 3422.0 3043.0 3314.1 3072.6000000000004 5594.2 4246.4 3918.6000000000004 3560.3999999999996 5300.4 5765.4 5298.5 True False 3999.5499401325146 3197.8757022961177 3784.0892137482233 3825.3871379342554 4771.300590591928 4695.75122946781 4630.558896820018 4065.097603267702 4099.867862999526 4462.9921357558005 3982.7362188392813 1.004221650736923 0.8029343462841982 0.9501229822473779 0.9604922163409347 1.1979956312503328 1.1790264208952126 1.1626576911913933 1.0206795981212193 1.0294098423104658 1.1205844149669757 1.0 11.959544216190826 -6.5349698998134755 24.89659905987008 1.0505797596766626 0.9154488434306595 0.4181291862045553 0.08598890779645949 197.4999557269147 406666.57129558316 0.013354820862949876 0.02781578572033943 2.9176292227424187e-07 6.5349698998134755 -0.13513091624600315 S(ph)LAALSQIAYQR ddPTM_A549_PD325901_60min_R1 2 SLAALSQIAYQR 12 0 E7EX44;Q05682-3;Q05682-5;E9PGZ1 E7EX44;Q05682-5 CALD1 Caldesmon 1 S(1)LAALSQIAYQR;S(1)LAALSQIAYQR 242.48 9.4011e-51 22561000.0 5325.6 4618.700000000001 5345.799999999999 5404.799999999999 5373.1 6840.1 5904.2 6434.3 6089.6 6474.6 6040.8 True False 5866.250991500494 5007.934058329062 5708.598134906843 5738.642220808601 4995.711992188712 6784.39649342793 6128.887561902209 6305.962838889296 5833.675289154441 6065.792651037851 5297.819895786244 1.1072952850221212 0.9452820512664558 1.0775372223293815 1.0832082505056422 0.9429750520892903 1.2806015732667833 1.1568697468890885 1.190293925224771 1.1011463968026551 1.1449601478265492 1.0 12.371183083471047 -4.030622184457627 12.971184970947004 1.071317532975997 1.1054204134411039 0.0 0.10022917669866957 0.0 0.0 0.013145672400035549 0.0 9.31918247473499e-05 4.030622184457627 0.0341028804651069 S(ph)LADVPR ddPTM_A549_MK2206_60min_R1 2 SLADVPR 7 0 Q9H4B6;H0YJH0 Q9H4B6 SAV1 Protein salvador homolog 1 1 S(1)LADVPR;S(1)LADVPR 104.2 0.010163 6617900.0 792.25 861.47 753.11 946.6300000000001 1512.4099999999999 1150.8 828.85 1111.88 1472.81 1811.94 1728.63 True False 925.9624313471604 905.3151433641269 859.9123224301997 1178.5543924958358 1289.9364924774125 1272.576892160785 979.4413161918208 1269.49239498969 1139.220886594281 1402.621495553017 1299.3634632390583 0.712627726994045 0.6967374171868383 0.6617950610113408 0.9070244206789768 0.9927449316312571 0.9793848512474719 0.753785483355262 0.9770109987740415 0.8767530554956707 1.0794681667103034 1.0 10.343589328432264 -6.3058996011189095 5.61374427273587 0.9347845591588789 0.6907756755987385 0.6683354546378482 0.07993256387229085 0.08218521838666208 6.6124907807032205 0.010156830644363516 0.024368631309019166 4.944249734418743e-07 6.3058996011189095 -0.2440088835601404 S(ph)LASIEAK ddPTM_A549_PD325901_60min_R1 2 SLASIEAK 8 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.996)LAS(0.004)IEAK;S(0.988)LAS(0.012)IEAK 132.88 0.0010764000000000001 65639000.0 15662.3 14534.6 13530.6 12233.6 21344.7 17201.3 16422.0 14716.9 14939.0 15706.2 18292.7 True False 17252.32516602413 15759.481751183135 14448.867882107554 12989.241687478547 19845.52190721751 17061.218315872837 17046.94819646321 14423.359884315296 14311.165781771897 14714.50785156314 16042.813866979384 1.0753927153349487 0.982339001240959 0.9006442387172103 0.8096610604087388 1.2370349785124146 1.0634804129336446 1.0625909106600442 0.8990542434705061 0.8920608255156718 0.9172024292976264 1.0 13.969639588418264 -8.262869818137903 24.977578396405725 0.9438564404365177 1.0148688316951178 0.1413433148721709 0.10549866819009861 259.7486438015451 4535565.148862743 0.018152267143321216 0.022561374430931914 5.459214791594077e-09 8.262869818137903 0.07101239125860004 S(ph)LDDLSAPPHHR ddPTM_A549_PD325901_60min_R1 1 SLDDLSAPPHHR 12 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(1)LDDLSAPPHHR 105.43 1.2613e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LDEADSENKEEVSPLGSK ddPTM_A549_MK2206_60min_R1 1 SLDEADSENKEEVSPLGSK 19 1 Q6ZV73-2;Q6ZV73;F8VQX5 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 S(1)LDEADSENKEEVSPLGSK 102.21 6.1671e-10 9404600.0 2575.7 4383.5 3295.8 3722.4 5617.8 4106.4 2973.0 4650.4 5923.9 4650.0 4271.1 True False 3010.4151901809823 4606.601426557683 3763.193998573184 4634.388167104885 4791.429061854658 4540.9365223922905 3513.155616864672 5309.608441252706 4582.146108524426 3599.561770434744 3210.467993636779 0.9376873390881623 1.4348691330011927 1.172163686425755 1.4435241766279396 1.4924394422717748 1.4144157585101396 1.0942814642064107 1.6538425088729967 1.4272517644176317 1.1211953452173198 1.0 11.648567900665817 -10.767577616873433 1.0501006201489091 1.0026975032301175 1.3529962236406865 0.2267914585114882 0.19503372578680186 0.47727528094625166 0.9460214131518464 0.12074669684581191 0.031630616349125625 1.7077424859772608e-11 10.767577616873433 0.350298720410569 S(ph)LDEADSENKEEVSPLGSK ddPTM_A549_PD325901_60min_R1 2 SLDEADSENKEEVSPLGSK 19 1 Q6ZV73-2;Q6ZV73;F8VQX5 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 S(1)LDEADSENKEEVSPLGSK;S(0.997)LDEADS(0.003)ENKEEVSPLGSK 156.31 5.2461999999999995e-27 42776000.0 10832.5 12876.4 11849.400000000001 11476.7 14784.1 13198.2 13468.8 12948.4 12604.2 13816.7 12088.0 True False 11932.207425534978 13961.539417729738 12653.57154023068 12185.589693523169 13745.715818376195 13090.718235049271 13981.362554410163 12690.134004176709 12074.489306286192 12944.311204027228 10601.25263214543 1.1255469367227215 1.3169707299866762 1.1935921139981278 1.1494480998003638 1.2966124188660528 1.234827495324016 1.3188406162509008 1.1970409954855064 1.1389681696362532 1.2210171432739096 1.0 13.371947121641103 -9.509193222230822 0.7693020796617732 1.019453468944536 1.235115121371964 0.09010223675164164 0.08659928166731412 0.23935191657777766 0.3050663625678113 0.021620376587054492 0.013873453212508696 3.096041530964574e-10 9.509193222230822 0.21566165242742796 S(ph)LDFFR ddPTM_A549_PD325901_60min_R1 1 SLDFFR 6 0 Q6P3S1 Q6P3S1 DENND1B DENN domain-containing protein 1B 1 S(1)LDFFR 86.95299999999999 0.039055 1185200.0 351.54 468.17 433.76 383.74 432.63 449.59 403.13 400.83 450.62 477.16 484.93 True False 387.22808200993 507.62432894275764 463.1975620107733 407.44274826322754 402.2435612924756 445.92868810108934 418.4713327512002 392.835131204948 431.6820084732614 447.032036167365 425.2866842245439 0.910510712828903 1.193605038136442 1.0891419345878537 0.9580425707570589 0.9458174361276218 1.0485366804140213 0.9839746887778285 0.923694876366122 1.0150376780791495 1.0511310434806371 1.0 8.732291874496322 -6.24998723766058 24.720552791412732 0.9955875114280757 1.0773378167443524 0.16364411731002326 0.07196290586456758 721.0924331437723 1556544.3356436158 0.00886383342010008 0.023213498179538293 5.623578506048131e-07 6.24998723766058 0.0817503053162767 S(ph)LDGAAAVDSADR ddPTM_A549_MK2206_60min_R1 1 SLDGAAAVDSADR 13 0 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0 P11171 EPB41 Protein 4.1 1 S(1)LDGAAAVDSADR 58.268 0.011824 2853600.0 428.97 711.8 769.3 652.11 853.53 785.14 514.08 673.71 968.82 798.66 1011.8 True False 501.3696486904283 748.0275796563844 878.398307877405 811.8769792743308 727.9768676643537 868.2229936662479 607.4816816406967 769.2104556503438 749.3838168876309 618.24215130654 760.5421357406033 0.6592266557357837 0.9835452166341416 1.1549633696784405 1.067497698183071 0.9571815070514955 1.1415843420966898 0.7987482258943368 1.0113975538006181 0.9853284672490807 0.8128966460280417 1.0 9.570884368480653 -5.265862386511096 5.575820356749276 1.0037412763631535 0.6480310761397768 0.4381450490519303 0.10745931800137888 0.07430653929340476 9.17590259925223 0.01147467222294653 0.10018310242285314 5.421726596846485e-06 5.265862386511096 -0.3557102002233766 S(ph)LDGAEFSR ddPTM_A549_PD325901_60min_R1 2 SLDGAEFSR 9 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 S(1)LDGAEFSR;S(1)LDGAEFSR 130.23 4.9687e-05 82534000.0 13492.8 14430.2 14580.7 14445.5 18287.5 12470.0 13927.9 14649.5 14369.8 13851.5 14786.2 True False 14862.579123125628 15646.283596791314 15570.233982871836 15337.765726889182 17003.049088450072 12368.448454415324 14457.933856139323 14357.304230189566 13765.887278325572 12976.913926088224 12967.591137444475 1.1461326136516823 1.206568238538305 1.2007036478742854 1.1827767828521927 1.3111956498499586 0.9537969175092896 1.1149282625353154 1.1071681762646135 1.0615608660405695 1.000718929872552 1.0 13.662622888682236 -7.265358775394552 24.99984201012508 1.0387056690099272 1.207343303649952 0.6837343192073346 0.0574853756927107 152.37506230590108 971923.4658717343 0.00859812021084377 0.014069325173095705 5.4280173180766736e-08 7.265358775394552 0.16863763464002468 S(ph)LDGLSR ddPTM_A549_MK2206_60min_R1 1 SLDGLSR 7 0 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 S(0.995)LDGLS(0.005)R 84.615 0.013977000000000002 4770200.0 615.46 537.85 697.77 478.57 914.79 602.11 709.19 501.59 1112.0 830.32 867.56 True False 719.3346014476789 565.2242676569067 796.724278288856 595.8196714838235 780.225602814985 665.8248805517293 838.0406430959491 572.6919185549507 860.1337754991073 642.7501353177154 652.1209085620852 1.1030693725704925 0.8667476540557731 1.2217431887678907 0.9136644196819192 1.1964431634853854 1.0210144649707078 1.2851000973788949 0.8781989827894431 1.318978987187647 0.9856303131500074 1.0 9.34899566651813 -6.781033931181691 24.993059302904452 1.1359270230701661 1.0288688423010233 0.010957766977606642 0.15444279597761412 456.0592541576111 581707.5241781037 0.022709271620483067 0.042959948217392 1.6556406041543082e-07 6.781033931181691 -0.10705818076914286 S(ph)LDGVTNDR ddPTM_A549_PD325901_60min_R1 2 SLDGVTNDR 9 0 E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7 E9PRL8 DHCR7 7-dehydrocholesterol reductase 1 S(1)LDGVTNDR;S(1)LDGVTNDR 82.48899999999999 0.001509 5282200.0 1311.51 1367.2 830.24 1250.88 1365.6999999999998 1168.56 1338.38 1367.85 1507.15 1207.8 1510.3 True False 1444.6535297173677 1482.418742188817 886.5850790386953 1328.1440166454 1269.7779434092283 1159.043634794833 1389.3127832896373 1340.5671586924334 1443.8097267553069 1131.5393018755624 1324.5426745805132 1.090681000651711 1.119192888714064 0.6693518420004697 1.0027189324541976 0.9586538567444578 0.8750519383317761 1.0488999788018434 1.0120981259565647 1.0900439483481088 0.8542867841037469 1.0 10.37127861037331 -7.794608030644683 24.59467475061767 1.041270109819472 0.9498576460083274 0.0 0.12635118400722456 248.60869565640556 184343.28859504146 0.017537830545756604 0.024232907695171776 1.6046930414502758e-08 7.794608030644683 -0.09141246381114465 S(ph)LDSDES(ph)EDEEDDYQQKR ddPTM_A549_PD325901_60min_R1 1 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 S(0.569)LDS(0.431)DES(1)EDEEDDYQQKR 195.39 4.4642e-49 173540000.0 7474.0 6257.9 6425.8 6346.5 8241.2 8623.9 8726.3 9188.5 8617.0 8439.5 9445.3 True False 8232.754977932005 6785.275195101956 6861.893429474432 6738.508891052726 7662.366542596568 8553.669817644932 9058.38412171458 9005.22815926119 8254.85745642469 7906.628529705924 8283.587978689884 0.9938634078748665 0.819122729493253 0.8283721313912689 0.8134770715767149 0.9250057538241337 1.032604451072392 1.0935338823005096 1.0871168607646562 0.9965316331112671 0.9544932159888064 1.0 13.016040081112388 -7.05682589894629 3.854699596070308 1.0154657194301315 0.8583193581167254 0.6228126254836368 0.05949160157711158 0.118630432096656 3.5502523559864483 0.008705172767260128 0.015911819793572167 8.77352465896781e-08 7.05682589894629 -0.1571463613134061 S(ph)LDYLNLDK ddPTM_A549_MK2206_60min_R1 3 SLDYLNLDK 9 0 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 S(1)LDYLNLDK;S(0.998)LDY(0.002)LNLDK;S(0.999)LDY(0.001)LNLDK 85.958 0.0012317 5375100.0 2804.89 2366.38 2736.38 2278.16 3951.0 3238.98 3009.91 3089.15 4180.5 3585.09 3708.47 True False 3278.2868590234634 2486.8186343738053 3124.4398306376856 2836.3093022704884 3369.813133858051 3581.726713739086 3556.7716860938963 3527.0464726251043 3233.6234248867086 2775.2156790468593 2787.5545504348243 1.1760440198424424 0.8921147871297773 1.1208533408432533 1.017490151655708 1.2088779153514329 1.2848992365657492 1.2759469354739923 1.2652833904451946 1.1600215767552613 0.9955735856770802 1.0 11.444784322474131 -4.947101549199557 19.661660017099877 1.1108832683617569 1.8905868215324473 0.007824675977853413 0.1263678758068776 1013.7871467281218 325907.90822516964 0.018217891711547373 61160.53731508385 1.1295317702656534e-05 4.947101549199557 0.7797035531706904 S(ph)LDYLNLDK ddPTM_A549_PD325901_60min_R1 2 SLDYLNLDK 9 0 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 S(1)LDYLNLDK;S(1)LDYLNLDK 117.98 0.0001717 8577000.0 2705.0 2672.1000000000004 2870.0 2782.1000000000004 3268.3 2782.1 2780.8 2667.7 3558.7 3335.2 3933.6 True False 2979.609608684248 2897.2872447357677 3064.7754587120044 2953.9439983924685 3038.745883022903 2759.443500002317 2886.6248657121496 2614.490630729835 3409.1402147126073 3124.614902811208 3449.792137144879 0.8637069974744148 0.839844004958984 0.8883942385144624 0.856267241897425 0.8808489793642563 0.7998868889202382 0.8367532740976045 0.7578690329132824 0.9882161240978664 0.9057400500069566 1.0 11.752293721409528 -8.814391824928597 11.470569672394419 0.9945034635256639 0.8424448219005445 0.5937437335778684 0.043880273930940086 0.19396446270885243 41.45572434952728 0.0059844580510889705 0.006369582327006658 1.5332330600319903e-09 8.814391824928597 -0.1520586416251194 S(ph)LEDLRAPK ddPTM_A549_MK2206_60min_R1 3 SLEDLRAPK 9 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 S(1)LEDLRAPK;S(1)LEDLRAPK;S(1)LEDLRAPK 84.479 0.00037642 116854700.0 6003.3 6803.5 6098.6 5562.4 7872.9 5814.0 5995.7 6009.9 9361.9 9494.5 9715.4 True False 7016.510273406642 7149.769089901952 6963.473183960928 6925.188249705629 6714.80683916757 6429.233620979143 7085.041080402127 6861.821729546839 7241.444597882277 7349.6858557833675 7302.79804860077 0.960797522636001 0.9790451608163888 0.9535349516196935 0.9482924494992037 0.9194841202618412 0.8803794899149643 0.9701817075113606 0.9396154301242902 0.9915986379042415 1.0064205263339552 1.0 12.834233619532839 -8.792283962104936 5.666652821042141 0.9962546651723811 0.9434341825714077 0.48439072780732406 0.025419897380399594 0.12025417054158948 10.440903721431534 0.004634176512460441 0.004981855003634904 1.6133033584794783e-09 8.792283962104936 -0.052820482600973495 S(ph)LEDLRAPK ddPTM_A549_PD325901_60min_R1 4 SLEDLRAPK 9 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 S(1)LEDLRAPK;S(1)LEDLRAPK;S(1)LEDLRAPK;S(1)LEDLRAPK 107.85 0.0001307 177864000.0 10389.0 10127.2 11263.2 11271.199999999999 11865.5 11693.5 11651.7 12285.2 11620.900000000001 12701.900000000001 12238.1 True False 11443.68363202242 10980.654685411493 12027.58848312372 11967.396425247538 11032.108213752792 11598.272012967576 12095.111819554892 12040.162048447044 11132.513985768333 11899.899866280182 10732.891283707735 1.0662256170798683 1.023084497471791 1.1206289307505894 1.1150207440760862 1.0278785018999737 1.0806288544610032 1.126920183931703 1.1218004291838597 1.0372334622141581 1.1087319857924898 1.0 13.389751148913309 -9.001353136445449 3.504703012182607 1.015010946074722 1.0846670380555818 0.0 0.04475767227539926 0.15744725309931237 3.981198506966917 0.006766555588895113 0.006861433756702219 9.968891369848375e-10 9.001353136445449 0.06965609198085976 S(ph)LEDNGSTR ddPTM_A549_PD325901_60min_R1 1 SLEDNGSTR 9 0 A0A494C067;A0A2R8Y4T1;C9J8K5;E7ERH1 A0A494C067 TNS1 1 S(1)LEDNGSTR 60.641000000000005 0.0079938 5130300.0 278.15 362.66 341.06 488.31 517.55 341.97 471.45 399.29 423.04 388.02 293.08 True False 306.38758323679247 393.22263095538096 364.2063825603893 518.4717996675267 481.1990734505715 339.18510969979206 489.39128773733876 391.3258477130546 405.261099961228 363.52035098009253 257.03301798719264 1.1920164406740112 1.5298526003961652 1.4169634135429903 2.0171408472251646 1.8721294144184564 1.3196168817373217 1.9040016398271602 1.5224730689368222 1.576688874973336 1.4142943728661581 1.0 8.005809887040988 -10.488099672854904 0.6759234044554133 0.96931474785801 1.6140280165024206 0.18216141631054195 0.2673904310783668 0.5718024757862078 0.44023147320838646 0.20346628020046076 0.049229156675854494 3.250126967114671e-11 10.488099672854904 0.6447132686444106 S(ph)LEDVTAEYIHK ddPTM_A549_MK2206_60min_R1 2 SLEDVTAEYIHK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 S(1)LEDVTAEYIHK;S(0.992)LEDVT(0.008)AEYIHK 70.889 0.00086268 3128900.0 740.76 782.77 802.76 773.65 858.06 820.49 715.25 788.64 1200.54 1008.3299999999999 1007.96 True False 865.7821781567976 822.6096495190054 916.6034390116537 963.1942847304681 731.8405106652086 907.3137072028176 845.2016666540384 900.4321351087075 928.6196068684338 780.5475526844011 757.6557137192117 1.1427118709457231 1.0857301471151655 1.2097888558276593 1.2712822820305811 0.9659275280492767 1.1975277039078325 1.1155484626454903 1.188444987352671 1.2256485235358254 1.030214038580686 1.0 9.565398612121513 -10.94585944021912 1.2061817602921125 0.999985713433953 1.1606290853654453 0.3215064918532661 0.07836361379131242 0.4084085982154269 1.0559856250311161 0.054088868851174955 0.012635353074839272 1.1327669248983964e-11 10.94585944021912 0.16064337193149225 S(ph)LEDVTAEYIHK ddPTM_A549_PD325901_60min_R1 1 SLEDVTAEYIHK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 S(0.987)LEDVT(0.013)AEYIHK 67.964 0.001371 2388300.0 290.22 196.97 423.96 222.83 319.87 319.96 269.87 372.64 441.49 273.6 215.89 True False 319.6829207513283 213.56935316627508 452.7324750785858 236.59370301635218 297.40343469159376 317.3543518423999 280.1400505285305 365.20740286957516 422.93571062283115 256.3248493071319 189.33689863946708 1.6884343360882048 1.12798590608031 2.3911476227392594 1.249591097754648 1.5707632100698217 1.6761357882316539 1.4795850810991131 1.9288760167398669 2.233773309175091 1.3538029361895403 1.0 7.564811785690477 -11.08489113318418 1.4343204922461685 1.0030577600227668 1.7593249708043293 0.20255293909442718 0.3740531165150052 0.37222930759934725 1.376804587042593 0.2655714831749324 0.059330678617650026 8.224487915477176e-12 11.08489113318418 0.7562672107815624 S(ph)LEEDLETLK ddPTM_A549_PD325901_60min_R1 2 SLEEDLETLK 10 0 P48681 P48681 NES Nestin 1 S(1)LEEDLETLK;S(1)LEEDLETLK 67.02199999999999 0.004786600000000001 1154120.0 1168.71 910.54 1305.44 1017.8 1399.6399999999999 1029.45 895.88 1280.65 1139.8000000000002 1492.0900000000001 1713.58 True False 1287.356578841171 987.274401340408 1394.0350086484327 1080.6671944084874 1301.334114895872 1021.0665005130594 929.9732036443467 1255.1064310995107 1091.8981697612699 1397.879182758328 1502.8205232786054 0.8566269617030711 0.6569476434794328 0.927612437450054 0.7190926512308112 0.8659278301954757 0.6794334284745229 0.618818541029427 0.8351672150186816 0.7265659157882319 0.930170410308655 1.0 10.553457008063491 -10.751225467602614 0.869967359110996 1.0087938651922665 0.761548939781543 0.3931271579960326 0.09446882175108233 0.43389821476484164 0.5490613212013226 0.07161810887619596 0.01588806499209216 1.7732686346763004e-11 10.751225467602614 -0.24724492541072352 S(ph)LEEMSLR ddPTM_A549_MK2206_60min_R1 3 SLEEMSLR 8 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(1)LEEMSLR;S(0.983)LEEMS(0.017)LR;S(1)LEEMSLR 104.05 0.0020923 8405800.0 1347.02 1989.5899999999997 1335.04 990.4300000000001 3787.1 2310.23 2123.89 2123.33 3250.35 2331.98 2199.9 True False 1574.3640445228818 2090.8516327740163 1524.3687468460287 1233.085394462092 3230.022606741036 2554.6970051934377 2509.773320922541 2424.3185299254055 2514.1509147423776 1805.1840983695513 1653.6041158487387 0.9520803857668281 1.2644209171557688 0.9218462461697624 0.7456956490636159 1.9533227909771953 1.5449266125478882 1.5177594787458302 1.4660815770170512 1.52040678336843 1.0916664279364179 1.0 10.691398169435022 S(ph)LEEMSLR ddPTM_A549_PD325901_60min_R1 2 SLEEMSLR 8 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(1)LEEMSLR;S(0.996)LEEMS(0.004)LR 99.788 0.0024009 5937400.0 1787.6100000000001 1689.2600000000002 1742.6 1677.65 1786.41 1531.28 1759.12 1534.95 2002.96 1622.44 2309.0 True False 1969.0868512310708 1831.619868658486 1860.8633151050658 1781.2746302804085 1660.9387243799367 1518.809763374265 1826.0642742274001 1504.3342181050205 1918.782556681025 1519.9988615126574 2025.0076379569673 0.9723849008380457 0.904500227222061 0.9189413808742436 0.8796384748837484 0.8202135603081774 0.7500266838038172 0.9017567341472937 0.7428782933494241 0.9475433675978068 0.7506138905462036 1.0 10.98371163425039 -8.97056815290576 15.99767549381888 0.9768634805271436 0.8605141602896786 0.0 0.0950235705246946 2.756285299679151 1498.1440424857046 0.01187135686349519 0.012433937270584066 1.0701184383324782e-09 8.97056815290576 -0.11634932023746491 S(ph)LEGELQR ddPTM_A549_MK2206_60min_R1 1 SLEGELQR 8 0 Q5TZA2;Q5TZA2-2 Q5TZA2 CROCC Rootletin 1 S(1)LEGELQR 70.056 0.006776399999999999 1354300.0 200.48 280.05 256.5 323.27 431.87 393.55 364.66 422.53 324.38 458.43 457.68 True False 234.31612273458984 294.3033488097366 292.8755569615939 402.4711645121416 368.3424950947296 435.1951997826526 430.91400176450463 482.42492144385534 250.90844792841781 354.87034460653746 344.02542467459915 0.6811011801125476 0.8554697638644213 0.8513195129069718 1.1698878502739272 1.0706839340235712 1.2650088294906912 1.2525644061687886 1.402294385364579 0.729331118959428 1.0315236001589014 1.0 8.426371378819933 -4.211427986723673 13.781997794269813 0.965297358491183 0.9473568388319304 0.0 0.23029034951929564 0.0 0.0 0.03369463186085689 0.0 6.145709293786765e-05 4.211427986723673 -0.017940519659252585 S(ph)LEGELQR ddPTM_A549_PD325901_60min_R1 1 SLEGELQR 8 0 Q5TZA2;Q5TZA2-2 Q5TZA2 CROCC Rootletin 1 S(1)LEGELQR 71.45100000000001 0.0061201 1778200.0 290.99 271.8 477.49 493.3 444.96 214.83 374.33 423.32 462.67 223.28 199.28 True False 320.5310905844841 294.70553988218296 509.8953427806257 523.7700206344142 413.70754462866637 213.08049570665955 388.57533299123554 414.8765505118846 443.22558887826517 209.18206269479683 174.7698233400019 1.8340185076511426 1.6862495724382287 2.91752507976541 2.996913372255678 2.367156621906224 1.2192064489996481 2.2233548421874336 2.3738454533124558 2.5360533094778166 1.1969003498266886 1.0 7.449312292942387 -7.057397298763113 23.589613762081427 1.80563452415739 2.3919982862445703 0.20157979906450485 0.5912921941420384 239.4342840524992 98404.13008244277 0.10677798798471282 0.18494560052556275 8.761988951933433e-08 7.057397298763113 0.5863637620871804 S(ph)LEGGGCPAR ddPTM_A549_MK2206_60min_R1 2 SLEGGGCPAR 10 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 S(1)LEGGGCPAR;S(1)LEGGGCPAR 95.36200000000001 0.00055887 124901000.0 4685.0 5241.2 5016.299999999999 4480.700000000001 5374.299999999999 4695.4 4385.2 4336.0 6060.3 6867.4 6893.8 True False 5475.713462747178 5507.954693024783 5727.686769537792 5578.471701146268 4583.747589292161 5192.264111445729 5181.934077051787 4950.641278443082 4687.6517263104715 5316.04957038356 5181.8792007991415 1.0567041898434686 1.0629261083846484 1.1053300448714585 1.0765344935647987 0.8845724517440049 1.0020040819641234 1.0000105900293155 0.955375663268955 0.9046238911913557 1.0258922225673897 1.0 12.339259668678867 -6.736680293134501 24.69504000498168 0.9570482491395292 1.076624423705741 0.5922549040067526 0.042494355716451916 100.90753474260039 100645.88082374333 0.006312663607976477 0.013136115033203787 1.833663781384989e-07 6.736680293134501 0.11957617456621172 S(ph)LEGGGCPAR ddPTM_A549_PD325901_60min_R1 2 SLEGGGCPAR 10 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 S(1)LEGGGCPAR;S(1)LEGGGCPAR 129.0 1.3922e-06 169961000.0 10097.5 10906.9 12580.5 11271.7 10389.400000000001 10449.9 10916.0 11369.099999999999 8085.799999999999 9850.5 12482.7 True False 11122.590766613384 11826.062740768883 13434.28838269212 11967.927309111952 9659.684385484246 10364.7994790533 11331.414353464404 11142.334381613588 7745.981945126931 9228.53774890315 10947.407034354883 1.0160023037152766 1.0802615362392778 1.2271662449868692 1.0932202732167076 0.8823719037001605 0.9467812283334986 1.0350774679250017 1.017805800647312 0.7075631627488301 0.8429884556171503 1.0 13.418301577990878 -7.168542377873957 0.8331559990604619 0.8760779121988173 1.112663907795378 0.36134509984128227 0.10594213171046683 0.5569430164407149 0.7504747796508836 0.02427772339027568 0.06558068135182073 6.783559242059782e-08 7.168542377873957 0.23658599559656068 S(ph)LEHSEGPVGR ddPTM_A549_MK2206_60min_R1 2 SLEHSEGPVGR 11 0 Q9HBR0;I3L0Q8;H0YF92 Q9HBR0 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 1 S(0.981)LEHS(0.019)EGPVGR;S(0.999)LEHS(0.001)EGPVGR 117.03 5.5801999999999995e-06 13884200.0 959.96 879.6600000000001 863.8199999999999 948.71 1434.25 1170.92 1191.1399999999999 983.23 1496.3600000000001 1438.33 1251.0900000000001 True False 1121.97777923133 924.4309366683553 986.3226651639922 1181.14399258921 1223.2737249394868 1294.8259772062104 1407.5547196341026 1122.605863515589 1157.4368491959037 1113.4102540364304 940.409824672575 1.1930732216903115 0.9830085909515215 1.0488221616648918 1.255988571791508 1.3007879042154809 1.3768741491583558 1.496746081022893 1.1937411052744473 1.2307791973556759 1.183962805178146 1.0 9.87714580100339 -3.926317879571173 12.689943433511434 1.1670164628498065 1.1626735724378292 0.0 0.15375364561469165 0.0 0.0 0.02350819636692693 0.0 0.00011849011484993056 3.926317879571173 -0.004342890411977329 S(ph)LEHSEGPVGR ddPTM_A549_PD325901_60min_R1 2 SLEHSEGPVGR 11 0 Q9HBR0;I3L0Q8;H0YF92 Q9HBR0 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 1 S(1)LEHSEGPVGR;S(0.997)LEHS(0.003)EGPVGR 93.766 8.900600000000001e-05 14048100.0 1068.4 854.04 752.14 689.29 1083.75 833.77 727.31 678.31 844.6400000000001 836.75 885.8 True False 1176.8631814854898 926.012948053641 803.1847433852433 731.8658778088293 1007.6311387345324 826.9800535555622 754.9881800493033 664.7805749260993 809.1427181147213 783.9174621993521 776.8522155488445 1.5149125637159166 1.192006574119654 1.033896444277751 0.9420915113072923 1.2970692733657754 1.0645268649601554 0.9718556051435159 0.8557362154865366 1.0415658241291925 1.0090947113351747 1.0 9.60149636347423 -7.500668523353924 10.989426933908534 1.0026607959080223 1.1735102795243637 0.33519154789741223 0.14438244355410026 0.8116153822433756 397.4787134863899 0.021673190098617897 0.03407242590506999 3.157413609915109e-08 7.500668523353924 0.17084948361634145 S(ph)LEHSEGPVGRDPAGPPDGGPDTEPR ddPTM_A549_MK2206_60min_R1 2 SLEHSEGPVGRDPAGPPDGGPDTEPR 26 1 Q9HBR0;I3L0Q8;H0YF92 Q9HBR0 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 1 S(1)LEHSEGPVGRDPAGPPDGGPDTEPR;S(0.995)LEHS(0.005)EGPVGRDPAGPPDGGPDTEPR 159.75 5.1926e-41 25427000.0 460.58 614.82 589.98 624.6700000000001 828.25 653.69 496.82 607.5899999999999 707.55 682.04 815.3800000000001 True False 538.3146439001265 646.1117118914553 673.6480354627729 777.7141780425022 706.4155221761405 722.8630419156966 587.0857630577555 693.7177431663363 547.2910547251738 527.9666903026479 612.898642656823 0.8783094078437079 1.0541901497622164 1.0991181715505365 1.2689115685935097 1.1525813128153393 1.1794169404294885 0.957883934140933 1.13186372898327 0.892955240286958 0.8614257783538107 1.0 9.259504699536121 -8.756520030633054 24.986470883877306 0.9494510838834456 1.0959642640590361 0.3330932503961489 0.10576976516065666 116.13423630250654 589871.2480721499 0.018231700663195613 0.020354179079951726 1.7517816362573615e-09 8.756520030633054 0.14651318017559056 S(ph)LEHSEGPVGRDPAGPPDGGPDTEPR ddPTM_A549_PD325901_60min_R1 2 SLEHSEGPVGRDPAGPPDGGPDTEPR 26 1 Q9HBR0;I3L0Q8;H0YF92 Q9HBR0 SLC38A10 Putative sodium-coupled neutral amino acid transporter 10 1 S(1)LEHSEGPVGRDPAGPPDGGPDTEPR;S(1)LEHSEGPVGRDPAGPPDGGPDTEPR 162.49 3.3446e-41 30273000.0 817.1700000000001 774.8299999999999 675.4 608.02 807.39 940.9100000000001 819.6700000000001 779.05 946.26 811.4200000000001 610.39 True False 900.1284968312414 840.1276433661216 721.2367055101358 645.5760144863906 750.6817117442891 933.247540917716 850.8629903906344 763.5112365970975 906.4919829077896 760.186802722197 535.3158995810104 1.6814903079392343 1.5694053623732942 1.3473104499131165 1.2059720531216807 1.4023153661825563 1.7433585321268528 1.5894595902281279 1.426281635189044 1.6933776553569533 1.4200714070274993 1.0 9.064246692989979 -10.896029850087826 1.1008225244887921 0.9946967403470299 1.5219156646421739 0.1672718959738293 0.19598833780885014 0.30561727293248325 0.6467227021156587 0.12549741423783414 0.028777551328563848 1.2704867786436349e-11 10.896029850087826 0.5272189242951439 S(ph)LELNGAVEPSEGAPR ddPTM_A549_MK2206_60min_R1 2 SLELNGAVEPSEGAPR 16 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16;M0R2A7;M0QYS2;M0R0P4;Q9NRL3-2 F5GYK2 STRN4 Striatin-4 1 S(1)LELNGAVEPSEGAPR;S(1)LELNGAVEPSEGAPR 131.48 4.1255e-10 9955600.0 3423.6 4394.0 3532.7 3662.7 5297.5 3490.8 3716.6 4210.9 6155.9 5382.1 5377.1 True False 4001.419981016272 4617.635831708558 4033.689980811787 4560.061664424852 4518.244767555814 3860.194138994495 4391.8581115503675 4807.8079703404 4761.598478952297 4166.27987196921 4041.817669589643 0.9900050690368047 1.1424651503830394 0.99798910058734 1.1282205277923447 1.1178744656273774 0.9550638981165155 1.0866047087166757 1.1895162927595708 1.1780834436887728 1.0307936212254234 1.0 11.980788526441117 -7.982222514046328 24.964197538366413 1.0964326797022586 1.0592947028125415 0.06959474325203063 0.0759559239193246 742.785325706627 1043060.5139093462 0.013777126576180717 0.019034203330242853 1.041783526999948e-08 7.982222514046328 -0.037137976889717095 S(ph)LELNGAVEPSEGAPR ddPTM_A549_PD325901_60min_R1 1 SLELNGAVEPSEGAPR 16 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16;M0R2A7;M0QYS2;M0R0P4;Q9NRL3-2 F5GYK2 STRN4 Striatin-4 1 S(1)LELNGAVEPSEGAPR 154.74 3.6618000000000005e-20 9117400.0 3388.5 4569.0 3628.1 4741.6 4204.1 3587.4 3853.9 4118.1 4943.2 4287.5 4233.1 True False 3732.4980255181413 4954.045664906895 3874.3246835376403 5034.477863045079 3908.8185193576433 3558.1854037986786 4000.5622734350013 4035.9612649130495 4735.454494441049 4016.7865182906708 3712.455535831805 1.0053987150803265 1.3344390571392801 1.0436016394387786 1.3561045551800972 1.052893019628272 0.9584452579851409 1.0776054379163478 1.0871406339978589 1.27555857537834 1.0819756572224315 1.0 11.85815803148617 -11.174785844758015 1.5919833876377782 1.0002423251087138 1.1532962547119072 0.03832404545381163 0.13024069505625435 0.5904453690362871 2.694501115018027 0.09334213192344329 0.019842775535432407 6.686735663541016e-12 11.174785844758015 0.15305392960319342 S(ph)LELSSLAGPGEDPLSADSLGKPTR ddPTM_A549_MK2206_60min_R1 2 SLELSSLAGPGEDPLSADSLGKPTR 25 1 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 S(0.959)LELS(0.02)S(0.02)LAGPGEDPLSADSLGKPTR;S(0.999)LELS(0.001)S(0.001)LAGPGEDPLSADSLGKPTR 97.257 2.0526e-09 24060000.0 1366.1399999999999 1432.6 1483.88 1003.48 1802.19 1867.63 1191.22 1501.21 2321.1 2175.1000000000004 2079.28 True False 1596.711033083761 1505.5132208706598 1694.3164969363365 1249.3326450479296 1537.0902383466573 2065.2613669675416 1407.6492545985664 1714.0111147628104 1795.3745560350533 1683.743399327444 1562.937390791384 1.0216090820344865 0.9632588162142262 1.0840590972607225 0.7993491309433307 0.9834624517930056 1.3213973759510667 0.9006434057386085 1.0966601252625552 1.148718155066964 1.077294208487066 1.0 10.610044271698365 -7.0282083670154 24.998440689842607 1.0787038546048355 0.9646848083370522 0.2093147921019165 0.11554412615421908 924.2146718520386 819043.9230575499 0.01676468083736099 0.029080066878446616 9.371122887086204e-08 7.0282083670154 -0.11401904626778336 S(ph)LELSSLAGPGEDPLSADSLGKPTR ddPTM_A549_PD325901_60min_R1 2 SLELSSLAGPGEDPLSADSLGKPTR 25 1 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 S(1)LELSSLAGPGEDPLSADSLGKPTR;S(0.996)LELS(0.002)S(0.002)LAGPGEDPLSADSLGKPTR 100.98 2.8596e-12 56413000.0 1529.54 1756.5800000000002 1625.35 1751.3200000000002 1852.6 1931.8000000000002 1861.45 1678.3 2024.88 2281.86 2419.07 True False 1684.817774812165 1904.6131613180462 1735.6560250235395 1859.4950588636991 1722.4797671230388 1916.068061286249 1932.288498374525 1644.8249898991194 1939.781335309879 2137.782970175337 2121.539725748185 0.7941485866912037 0.8977504112709286 0.8181114894803305 0.8764837331565531 0.8119007842361221 0.9031497445142235 0.9107953411963953 0.7752977565947078 0.9143271331512745 1.007656347053046 1.0 11.050895977951738 -9.659206300094292 0.6004486961450299 0.998411964504384 0.8482576735973655 0.6057628232382141 0.046529310651677744 0.34755995002192264 0.2703654988718311 0.022432793959121188 0.011153076211032929 2.1917635487885773e-10 9.659206300094292 -0.15015429090701848 S(ph)LEPAENVHGAGGGAFPASQTPSK ddPTM_A549_MK2206_60min_R1 1 SLEPAENVHGAGGGAFPASQTPSK 24 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 S(1)LEPAENVHGAGGGAFPASQTPSK 149.74 1.4128e-28 9421100.0 2348.9 2534.6 2849.1 2496.6 3237.2 2642.5 2616.4 3233.7 3402.0 3356.6 3890.1 True False 2745.336894908609 2663.600313848092 3253.1452215956238 3108.267112076634 2761.012168292909 2922.127596050464 3091.7660127698405 3692.086877790912 2631.4524318776644 2598.341728740055 2924.08080870184 0.9388717598838914 0.9109188453073601 1.1125360188112836 1.0629894710251064 0.9442325123424594 0.9993320250775686 1.0573462961656128 1.2626487157275355 0.8999246614685422 0.888601204524714 1.0 11.513767466233723 S(ph)LEPAENVHGAGGGAFPASQTPSK ddPTM_A549_PD325901_60min_R1 1 SLEPAENVHGAGGGAFPASQTPSK 24 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 S(1)LEPAENVHGAGGGAFPASQTPSK 142.47 3.8269e-28 6793900.0 2173.1 2330.2 2082.3 2576.6 2762.6 3140.8 2046.2 3068.5 2893.3 2967.4 2623.6 True False 2393.7115122483333 2526.5741318376113 2223.617399887112 2735.7507301168303 2568.5645064526125 3115.2223661289227 2124.0692607236033 3007.2963603083163 2771.7046627217787 2780.0378575803466 2300.913832370679 1.0403307931710086 1.0980742069921106 0.9664062028763907 1.1889844337621849 1.1163236407710964 1.3539065749886188 0.9231415930665822 1.3070008611360457 1.2046103699007427 1.2082320591362679 1.0 11.167991241305703 -6.266312252723477 24.958352175509454 1.1259184032971048 1.0412507826560458 0.1282991344380614 0.12344014205247374 816.2312243444313 4180658.8958149534 0.01789663654026852 0.042888586533948184 5.41611338071285e-07 6.266312252723477 -0.08466762064105904 S(ph)LEPAENVHGAGGGAFPASQTPSKPASADGHR ddPTM_A549_PD325901_60min_R1 1 SLEPAENVHGAGGGAFPASQTPSKPASADGHR 32 1 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 S(1)LEPAENVHGAGGGAFPASQTPSKPASADGHR 230.43 1.7925999999999995e-115 15238000.0 2681.7 2567.5 2283.5 2682.6 3434.4 3395.5 3126.3 3570.7 3975.8 3213.9 3720.3 True False 2953.944209836801 2783.872235642032 2438.4720418009983 2848.298109373362 3193.179592036795 3367.8481737744364 3245.2730572770024 3499.479587340039 3808.71095221693 3010.9738055123935 3262.7266849247726 0.9053606063558183 0.8532348874040667 0.7473724517189282 0.8729809096587059 0.9786843644583177 1.0322189073744275 0.994650600760274 1.072562897624606 1.167339872449275 0.9228397277113073 1.0 11.6718624241548 -7.020358587644874 1.374766191358275 1.0748269373979924 0.8316381990029633 0.5657172459770118 0.07234259615067551 0.18354172169198063 0.6861373389336878 0.011563634191951264 0.02638764913153491 9.542043945540122e-08 7.020358587644874 -0.24318873839502908 S(ph)LEQDALR ddPTM_A549_PD325901_60min_R1 1 SLEQDALR 8 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 S(1)LEQDALR 52.79 0.026391 931700.0 163.62 369.17 171.04 180.94 253.05 254.21 334.62 339.63 286.88 375.46 488.03 True False 180.23058194932221 400.2812515022275 182.64780294707376 192.11625285544474 235.27664097510814 252.1397980430569 347.35414721108975 332.8558132154193 274.82343125207325 351.7533915235955 428.0054038770629 0.4210941738508757 0.9352247608939099 0.4267418151559978 0.44886408235777037 0.5497048374713681 0.5891042397106735 0.8115648635849027 0.7776906791369071 0.6421027135699704 0.8218433420168464 1.0 8.741485201582044 -14.116389234260122 0.18690409148996165 2.1591315621036022 0.5381851098010375 0.34834774346957764 0.15876687417564594 22.804870374423206 0.3466304197224906 9.904627476908702 0.1613272006098177 7.649107521692895e-15 14.116389234260122 -1.6209464523025647 S(ph)LESDAEDHKPLKK ddPTM_A549_MK2206_60min_R1 1 SLESDAEDHKPLKK 14 2 Q92823-5 Q92823-5 NRCAM Neuronal cell adhesion molecule 1 S(0.539)LES(0.461)DAEDHKPLKK 40.856 0.020699000000000002 8069400.0 1657.8 2210.4 1703.9 1826.2 2445.6 1723.1 1863.6 2432.1 2973.8 2784.9 2399.7 True False 1937.5961106813793 2322.899918618251 1945.538641352281 2273.6190819812323 2085.8554796667313 1905.4372982987895 2202.191997170871 2776.857622993872 2300.2390481827765 2155.7891558029487 1803.7882616492639 1.074181572126304 1.287789685744127 1.0785848221306253 1.2604689421264923 1.1563749049789047 1.0563530868953457 1.220870566680223 1.5394587502498207 1.2752267530999404 1.1951453513905443 1.0 10.81681428190452 -10.78306080023262 1.1451373796150446 1.0054112750810964 1.221034788123127 0.03727573552769059 0.14049772574614636 0.5007511363613887 1.2096504289233332 0.08069067249106762 0.022514616066982695 1.647931668716878e-11 10.78306080023262 0.21562351304203053 S(ph)LESINSR ddPTM_A549_MK2206_60min_R1 2 SLESINSR 8 0 E5RJH3;A0A0C4DH44;E5RI99;P62888 E5RJH3 RPL30 60S ribosomal protein L30 1 S(1)LESINSR;S(1)LESINSR 146.11 0.00083729 88760000.0 2802.2 3611.1 2957.6000000000004 2935.0 4072.4 3085.7 2757.1 3141.2 4820.9 3949.1 4170.9 True False 3275.1428527876487 3794.889565744827 3377.0321530978954 3654.075131757155 3473.355354675659 3412.226725878115 3258.0293815195405 3586.474719521543 3728.9738473953685 3056.995567230935 3135.150419016094 1.0446525413653003 1.210433012313259 1.0771515563064151 1.1655182825020292 1.1078751863413634 1.0883773566912225 1.0391939607612224 1.1439561871634498 1.1894082736118399 0.9750714188030295 1.0 11.614318947326607 -11.011322301954928 1.3041421672971467 1.0002167670507416 1.126246804816506 0.45248246164477546 0.05427904223306389 0.34401882424252034 1.0448229223145855 0.037999810661523026 0.008683314297113286 9.742663393456508e-12 11.011322301954928 0.12603003776576438 S(ph)LESINSR ddPTM_A549_PD325901_60min_R1 2 SLESINSR 8 0 E5RJH3;A0A0C4DH44;E5RI99;P62888 E5RJH3 RPL30 60S ribosomal protein L30 1 S(1)LESINSR;S(1)LESINSR 143.5 0.0009586 104914000.0 7667.0 8121.1 7840.400000000001 8368.1 8729.8 7669.3 8296.7 7633.9 8354.8 9340.6 9123.8 True False 8445.348195852917 8805.493598002928 8372.496692155264 8884.978531666009 8116.648964175053 7606.843763548311 8612.435458628446 7481.635875821305 8003.676810599631 8750.832921923231 8001.6304405334695 1.0554534177274333 1.1004624199334885 1.0463488353252501 1.1103960121249548 1.0143743858825247 0.950661720768144 1.0763350697878837 0.9350139239025519 1.0002557441363193 1.0936312276551243 1.0 12.966078283262915 -6.893293770091151 6.131856468590582 0.9973943881310169 1.0770822662088673 0.307111896351956 0.04737472379656488 0.11915983376775091 6.104026624339297 0.004777141357080276 0.009110232293065304 1.278516184082398e-07 6.893293770091151 0.07968787807785038 S(ph)LESLR ddPTM_A549_MK2206_60min_R1 1 SLESLR 6 0 Q5VT97-2;Q5VT97 Q5VT97-2 SYDE2 Rho GTPase-activating protein SYDE2 1 S(0.999)LES(0.001)LR 89.75200000000001 0.037860000000000005 3846000.0 484.58 726.44 508.6 540.79 903.25 467.06 641.88 479.32 731.92 631.77 694.41 True False 566.3652571564622 763.4126931238886 580.7271277608837 673.2835742769859 770.3831215280394 516.4839791906642 758.5012873707019 547.2650778559362 566.1412886360675 489.0527182166789 521.9688322589761 1.0850557009416584 1.462563750827788 1.1125705058817659 1.2898922936895483 1.475917859298181 0.9894919912275708 1.4531543657272807 1.0484631342593445 1.084626616853581 0.9369385449705054 1.0 9.027819853106527 -8.37264229442819 10.290446302981278 1.0414012732295446 1.2667259887835023 0.3702726685098424 0.15537067503071783 0.34459755143615933 29.87273009811491 0.022420184516717144 0.027103984942498497 4.239920422649078e-09 8.37264229442819 0.22532471555395772 S(ph)LESLR ddPTM_A549_PD325901_60min_R1 2 SLESLR 6 0 Q5VT97-2;Q5VT97 Q5VT97-2 SYDE2 Rho GTPase-activating protein SYDE2 1 S(1)LESLR;S(1)LESLR 89.75200000000001 0.037860000000000005 11457000.0 3514.1 3643.2 3953.8 4271.0 4598.0 4486.1 3661.0 4895.200000000001 3762.3 4500.1 4133.7 True False 3870.8488450563095 3950.2252498115135 4222.128644130845 4534.809969855228 4275.052342238872 4449.566688961715 3800.32135837607 4797.5613957898895 3604.1836147506797 4215.962918008131 3625.28110568329 1.0677375718500965 1.0896328131958688 1.1646348299754983 1.250885059022343 1.17923333877115 1.227371494581815 1.0482832220702478 1.3233625906329956 0.9941804537861805 1.16293407189827 1.0 11.82387715125217 -8.812916134673749 24.99734124680716 0.9972516897917808 1.1671155236937956 0.1810005468124315 0.09179155454438738 56.10230510948636 27243.270126061874 0.012615323306738764 0.013429922376317233 1.5384516974891314e-09 8.812916134673749 0.16986383390201476 S(ph)LETAR ddPTM_A549_MK2206_60min_R1 2 SLETAR 6 0 Q9H6A9 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 S(1)LETAR;S(0.989)LET(0.011)AR 84.568 0.04043 12496900.0 335.76 448.86 341.33 362.53 1329.1100000000001 592.97 616.01 538.3199999999999 857.3 615.78 706.6 True False 392.42807945613475 471.70505676392884 389.73572654074434 451.34986627458994 1133.5996796613701 655.7176918183702 727.9310432374058 614.6285085358584 663.1229188267853 476.6748703222161 531.1317188320918 0.7388526528203716 0.8881131366079275 0.7337835657748631 0.8497889511608635 2.1343098886167975 1.2345669982960745 1.370528284091293 1.1572054289797795 1.2485093533576372 0.8974701630894477 1.0 9.052925878564036 -6.556459057782432 24.999978191148948 1.2205443949148762 0.7961587892016452 0.3585086617049078 0.3061639630421348 173.72982501484788 129338.41564337342 0.04356471716569968 0.09068755753948404 2.7767766086609444e-07 6.556459057782432 -0.42438560571323103 S(ph)LETAR ddPTM_A549_PD325901_60min_R1 2 SLETAR 6 0 Q9H6A9 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 S(0.991)LET(0.009)AR;S(0.995)LET(0.005)AR 93.992 0.03605 11209000.0 2294.7 2371.8 2662.3 2656.6 3571.7 2957.8 2645.8 2788.6 3223.6000000000004 2888.9 3087.5 True False 2527.6562547311432 2571.6799098328233 2842.979687710444 2820.6921484236464 3320.8361136960825 2933.712657455464 2746.487366837314 2732.9791853856204 3088.1233023709683 2706.4943609772417 2707.7570732750705 0.9334870840809613 0.9497454314549496 1.0499389756082587 1.041707978999748 1.226415820854817 1.0834475095312361 1.0143034594737106 1.0093147617854963 1.1404728041706635 0.9995336685442385 1.0 11.402882597835678 -5.7793049302509925 2.748938969525729 1.0708146915398409 0.9327787879735165 0.3371677946264624 0.06548175227705964 0.23961286001378396 3.5628315976571376 0.010006311901339729 0.04579257387711828 1.6622451319433053e-06 5.7793049302509925 -0.13803590356632434 S(ph)LETDEEDSPSEGNSSR ddPTM_A549_PD325901_60min_R1 1 SLETDEEDSPSEGNSSR 17 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 S(0.569)LET(0.431)DEEDSPSEGNSSR 77.75399999999999 0.00038199999999999996 949440.0 0.0 0.0 0.0 221.59 292.49 121.78 163.92 213.87 0.0 163.23 234.39 True False 0.0 0.0 0.0 235.27711103259648 271.94651143572173 120.7882640560303 170.15806530046575 209.60419507223068 0.0 152.92362994299393 205.5615159206294 0.0 0.0 0.0 1.1445581629366888 1.3229446680122978 0.5876015435820613 0.8277719909701703 1.0196665175069162 0.0 0.7439312230118024 1.0 7.683426386274983 -6.228329296276779 23.313543770607783 0.6690287929348969 2.671363787423851e-07 0.48600770061547005 0.35307257730849834 282.86984742449016 199173.6207779871 0.0644591691375281 0.1705229852469487 5.911132628079043e-07 6.228329296276779 -0.6690285257985181 S(ph)LEVIPEK ddPTM_A549_MK2206_60min_R1 1 SLEVIPEK 8 0 Q9UPR0;Q9UPR0-3 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 S(1)LEVIPEK 93.096 0.0025686999999999997 3064800.0 1388.0 1543.4 1434.6 1100.4 2342.5 1792.6 1157.2 1521.6 1862.2 1725.5 1818.6 True False 1622.260466658074 1621.9524676055955 1638.0478519185301 1369.998049398833 1997.9213530909872 1982.2917421684244 1367.448260960578 1737.2914597045649 1440.4146733223374 1335.7083515882043 1366.9914291933792 1.186737847811761 1.1865125361924627 1.198286848722302 1.0021994433478107 1.4615463640982014 1.4501127803984226 1.0003341877333265 1.2708868706877618 1.0537115614340633 0.9771153813132288 1.0 10.416788482178868 -8.853477250635711 1.4308937994062818 1.0161585336662797 1.2247976016584288 0.2930571228744574 0.14136359841157015 0.3502763552651122 1.422616962804483 0.028515195416870903 0.029427410731019225 1.401272984985419e-09 8.853477250635711 0.20863906799214904 S(ph)LEVIPEK ddPTM_A549_PD325901_60min_R1 2 SLEVIPEK 8 0 Q9UPR0;Q9UPR0-3 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 S(1)LEVIPEK;S(1)LEVIPEK 99.568 0.0024064 5904800.0 1597.7 1500.1 1342.3 1493.4 2288.9 1528.4 1617.3 1807.9 1766.1 2098.9 1914.2 True False 1759.8973278354238 1626.5186916014086 1433.3965499056187 1585.6439262425183 2128.1355602763288 1515.9532171394048 1678.8472365205184 1771.8400162298865 1691.8769587781876 1966.3750957994846 1678.7655351135672 1.0483282453832172 0.9688778197911811 0.8538396339001864 0.9445297113126943 1.2676788483940147 0.9030166425455308 1.0000486675507938 1.0554422158243932 1.0078101577560283 1.1713220546110752 1.0 10.713185034919482 S(ph)LEVIPEKANDETGE ddPTM_A549_MK2206_60min_R1 2 SLEVIPEKANDETGE 15 1 Q9UPR0;Q9UPR0-3 Q9UPR0 PLCL2 Inactive phospholipase C-like protein 2 1 S(1)LEVIPEKANDETGE;S(0.974)LEVIPEKANDET(0.026)GE 113.35 1.1075e-06 3211600.0 1335.9 1598.1 1531.5 1187.1 1611.4 1385.0 1023.6 1371.9 1808.6 1811.5 1978.4 True False 1561.3672603807786 1679.4364639630062 1748.6897289929093 1477.9395532909436 1374.3651946086723 1531.5597807114063 1209.5748703069887 1566.3710262675427 1398.9549877407248 1402.2808918586109 1487.1086789377443 1.0499348719396069 1.1293300131653077 1.1758990810557401 0.9938342598784708 0.9241861163707242 1.0298909571326111 0.8133735532839466 1.0532996333438227 0.9407214197283896 0.9429579100165518 1.0 10.53829436906332 -6.38210353358787 5.5382394478796515 0.9669446786453413 1.1186214521777844 0.53011437893692 0.06568997491398612 0.12774573743108872 5.280238022613039 0.008521291414680148 0.02009491812905897 4.148551314989257e-07 6.38210353358787 0.15167677353244313 S(ph)LFINHHPPGQIAR ddPTM_A549_MK2206_60min_R1 3 SLFINHHPPGQIAR 14 0 Q8ND76;Q8ND76-3;R4GNF3;Q8ND76-2;R4GN48 Q8ND76 CCNY Cyclin-Y 1 S(1)LFINHHPPGQIAR;S(1)LFINHHPPGQIAR;S(1)LFINHHPPGQIAR 111.22 1.1503e-05 46272000.0 4490.48 4838.360000000001 4801.74 3589.49 6964.38 4871.88 4980.75 4499.5 8163.1 6503.36 6209.21 True False 5248.3632423045765 5084.611857693539 5482.698935223255 4468.915211138329 5939.928927658399 5387.4191079077855 5885.687803127724 5137.317904140836 6314.170883792057 5034.246459220318 4667.291791521954 1.1244986336269198 1.0894137510171613 1.174706699328821 0.957496426355007 1.2726714319529293 1.1542923280892634 1.2610498906065746 1.1007063911180088 1.3528553957696896 1.0786226111607014 1.0 12.188369949740522 -6.779552215585785 24.972395114032658 1.1775693266729141 1.0930332649614627 0.13844731130276222 0.10468727577150672 493.26301728209535 680067.5110793464 0.01950762013480551 0.03691878530402219 1.661298926410875e-07 6.779552215585785 -0.08453606171145145 S(ph)LFS(ph)SRVAEIK ddPTM_A549_PD325901_60min_R1 1 SLFSSRVAEIK 11 1 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 2 S(0.999)LFS(0.547)S(0.455)RVAEIK 63.727 0.020777 3049100.0 2473.3 2577.8 2920.4 3277.4 3799.0 3200.8 3218.5 3263.7 3278.6 2850.6 2523.1 True False 2724.3875952527733 2795.040252789887 3118.5959057918276 3479.8375544845508 3532.1713458385134 3174.7337460218587 3340.981778730776 3198.602943176882 3140.8118436386217 2670.612629513559 2212.7746952486896 1.2312087629629118 1.2631382032664458 1.4093598921246406 1.5726126848596569 1.5962634394829516 1.434729777432246 1.5098608032279985 1.445516775858374 1.4193997474675712 1.206906710948904 1.0 11.111640848049118 -10.487078939202624 0.7182026221854156 0.9855013023139454 1.4403996920552282 0.4984502675187068 0.12076098631225841 0.35859330069610934 0.31899189163875596 0.09235601529243079 0.02367021578405663 3.2577748092675866e-11 10.487078939202624 0.4548983897412828 S(ph)LGDEGLNR ddPTM_A549_MK2206_60min_R1 1 SLGDEGLNR 9 0 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 S(1)LGDEGLNR 104.43 3.445e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LGDEGLNR ddPTM_A549_PD325901_60min_R1 1 SLGDEGLNR 9 0 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 S(1)LGDEGLNR 116.55 1.5933e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LGEISALTSK ddPTM_A549_MK2206_60min_R1 2 SLGEISALTSK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LGEISALTSK;S(1)LGEISALTSK 122.42 8.5112e-06 3429600.0 1777.5900000000001 1568.3899999999999 1516.13 1374.69 2657.9 1999.88 1650.02 1813.9099999999999 2518.2 1970.65 2819.6000000000004 True False 2077.6037340970647 1648.214351864675 1731.1400318759504 1711.489111712179 2266.92643089884 2211.505974187095 1949.8072757951734 2071.0372973663975 1947.8317207390755 1525.4787963241342 2119.4155029988187 0.9802720283764116 0.7776740094297563 0.8168006836915712 0.8075288254193416 1.069599815463888 1.043450881178313 0.9199740555999227 0.977173798359043 0.9190419330155108 0.7197639132891558 1.0 11.049450734737771 -6.742121260718558 24.998335027175987 0.9714221067094031 0.8386643509639192 0.18107917708010846 0.09982678146679215 164.8590370820569 213332.3333424924 0.009397943710580087 0.01953996257602873 1.810834413295114e-07 6.742121260718558 -0.13275775574548387 S(ph)LGEISALTSK ddPTM_A549_PD325901_60min_R1 2 SLGEISALTSK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LGEISALTSK;S(1)LGEISALTSK 113.24 3.2095e-05 4150700.0 2653.0 2819.5 2779.3 2614.5 3549.3999999999996 2530.6000000000004 3085.6000000000004 2833.8 3144.6 3245.0 3421.3 True False 2922.3306069646255 3057.109160036111 2967.9200112885983 2775.991727039684 3300.102388765258 2509.9916326177567 3203.024196505109 2777.277635926905 3012.443397641066 3040.110146204835 3000.501789407609 0.9739472968425001 1.0188659679618715 0.989141223566661 0.9251758278696943 1.099850165200801 0.8365239579188206 1.0674961794098727 0.9256043924823737 1.003979870392217 1.0132005776290658 1.0 11.550988074901028 S(ph)LGEQDQMTLRPPEK ddPTM_A549_MK2206_60min_R1 2 SLGEQDQMTLRPPEK 15 1 P48681 P48681 NES Nestin 1 S(1)LGEQDQMTLRPPEK;S(1)LGEQDQMTLRPPEK 94.85600000000001 5.8675e-06 22471000.0 4057.3999999999996 4341.2 4151.1 3740.7999999999997 5152.5 4335.4 4584.9 4189.7 5771.1 5496.4 5357.299999999999 True False 4742.189926093996 4562.148537235594 4739.788399622897 4657.296167930893 4394.57407547548 4794.169150394393 5417.91698209312 4783.602805418127 4463.955064552967 4254.759422584415 4026.934556041841 1.177617828176278 1.1329085371876084 1.1770214622712256 1.1565363437414904 1.0912951314001484 1.1905257171863957 1.345419675113495 1.1879017994571115 1.1085243632418706 1.0565752592628443 1.0 11.975466311094975 -9.506881551695262 1.0755205083301145 1.0229199904157817 1.1795590863664027 0.46193910424622275 0.062332173186299314 0.2631647058722695 0.6346872761980996 0.01836025460433637 0.013510509081816642 3.1125651339646153e-10 9.506881551695262 0.15663909595062098 S(ph)LGEQDQMTLRPPEK ddPTM_A549_PD325901_60min_R1 4 SLGEQDQMTLRPPEK 15 1 P48681 P48681 NES Nestin 1 S(1)LGEQDQMTLRPPEK;S(1)LGEQDQMTLRPPEK;S(0.995)LGEQDQMT(0.005)LRPPEK;S(0.996)LGEQDQMT(0.004)LRPPEK 92.59200000000001 7.439600000000001e-06 55334000.0 16181.3 16125.3 15753.0 17245.4 19153.1 16900.0 17617.199999999997 18113.2 18743.8 18951.9 20922.199999999997 True False 17824.013663956535 17484.235622745266 16822.0933104844 18310.609190854917 17807.85233060795 16762.372003177137 18287.632186501753 17751.918016469484 17956.0632693203 17755.273799648516 18348.902036753258 0.9713940173779685 0.9528763948776855 0.9167901859625919 0.9979130715384692 0.9705132380639685 0.9135354240598013 0.9966608437862505 0.9674648641598281 0.9785906117627042 0.9676477515703288 1.0 14.163406117085362 -9.073108460381777 0.39074133877889705 1.0013029237147903 0.9531970000820046 0.09306727673900739 0.026734395337630574 0.978855612348526 0.3916083328682571 0.01686565975678681 0.011896954969975837 8.450677722061757e-10 9.073108460381777 -0.04810592363278576 S(ph)LGEQDQMTLRPPEKVDLEPLK ddPTM_A549_MK2206_60min_R1 1 SLGEQDQMTLRPPEKVDLEPLK 22 2 P48681 P48681 NES Nestin 1 S(0.954)LGEQDQMT(0.046)LRPPEKVDLEPLK 51.119 0.0020922 6156900.0 1269.0 1260.2 1160.2 780.64 1692.3 1021.5 1087.8 1452.3 1859.8 1623.2 1527.8 True False 1483.1761759287435 1324.3387972505977 1324.7338057966533 971.8968350442617 1443.364911776255 1129.5944519831787 1285.4391792887284 1658.1679724822159 1438.5582694903235 1256.5179926386393 1148.4050948650854 1.2915095749405283 1.1531982948980046 1.153542257623198 0.8463013960752587 1.256843006209252 0.9836202025173734 1.119325562936258 1.443887683794208 1.2526575125124513 1.094141778242681 1.0 10.165415920807705 -8.017837217546113 24.737989592976096 1.1533978784674235 1.1069947632589863 0.033907748445454966 0.15528945337846065 3143.8012504827843 4360058.123531069 0.027395362649616888 0.035759997161646025 9.597603018957163e-09 8.017837217546113 -0.04640311520843721 S(ph)LGEQDQMTLRPPEKVDLEPLK ddPTM_A549_PD325901_60min_R1 3 SLGEQDQMTLRPPEKVDLEPLK 22 2 P48681 P48681 NES Nestin 1 S(0.921)LGEQDQMT(0.079)LRPPEKVDLEPLK;S(0.823)LGEQDQMT(0.177)LRPPEKVDLEPLK;S(0.993)LGEQDQMT(0.007)LRPPEKVDLEPLK 66.012 0.00019549 44158700.0 4189.8 3931.9399999999996 4950.299999999999 4318.4 5406.8 5450.799999999999 5597.799999999999 5970.9 5533.299999999999 5615.4 5689.8 True False 4615.1454116322575 4263.2983829446275 5286.257126572137 4585.137760202017 5027.045020447401 5406.410492006978 5810.8273422336915 5851.805715419563 5300.754643569079 5260.842685669843 4989.990670613923 0.9248805691783893 0.8543700107599821 1.0593721462653085 0.9188670005344726 1.0074257352927916 1.0834510220320357 1.1644966345235233 1.172708748711871 1.0622774657245848 1.054279062414078 1.0 12.284821402935723 -6.96490557432849 4.099435981630382 1.0564999480531856 0.9423295165207887 0.4815251115017797 0.06844512823276308 0.2023089809101011 7.538918283953687 0.011422875305393064 0.02181307736506558 1.0841626104402995e-07 6.96490557432849 -0.11417043153239692 S(ph)LGGAVGSVASGAR ddPTM_A549_PD325901_60min_R1 1 SLGGAVGSVASGAR 14 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 S(1)LGGAVGSVASGAR 77.33800000000001 0.00043678 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LGHPEPLSNGR ddPTM_A549_MK2206_60min_R1 2 SLGHPEPLSNGR 12 0 P49768;P49768-2;P49768-7;G3V4M0;G3V2G7;G3V3P0;G3V3Z0;G3V499;H0YM52;G3V5B1;G3V4P4;G3V2B1;G3V449;P49768-4;P49768-3;P49768-5;P49768-6;G3V519 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 1 S(1)LGHPEPLSNGR;S(1)LGHPEPLSNGR 70.27199999999999 0.00096977 11591500.0 1328.1 1511.21 1335.75 1014.31 1975.8 1216.44 1563.12 1557.22 2180.78 1963.3899999999999 2468.46 True False 1552.2508110724698 1588.1241341002021 1525.1794355222182 1262.8159955341062 1685.1624373264342 1345.1628733924783 1847.1186706469914 1777.96070378624 1686.836811990057 1519.8588353664243 1855.473255969806 0.8365794581399936 0.8559132442305843 0.8219894469592061 0.6805897047942446 0.908211655384731 0.7249702301364608 0.9954973291606686 0.9582249154310487 0.9091140530119863 0.8191219304705284 1.0 10.857571491433017 -7.772088386093092 24.99989211557049 0.9587146565507961 0.8068847813784348 0.4215118393102465 0.07473915908703792 111.94613666197316 262807.44551911263 0.009728581837585008 0.013516126550950422 1.6900969340265377e-08 7.772088386093092 -0.15182987517236135 S(ph)LGHPEPLSNGRPQGNSR ddPTM_A549_MK2206_60min_R1 2 SLGHPEPLSNGRPQGNSR 18 1 P49768;P49768-2;P49768-7;G3V4M0;G3V2G7;G3V3P0;G3V3Z0;G3V499;H0YM52;G3V5B1;G3V4P4;G3V2B1;G3V449;P49768-4;P49768-3;P49768-5;P49768-6;G3V519 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 1 S(1)LGHPEPLSNGRPQGNSR;S(1)LGHPEPLSNGRPQGNSR 92.01 2.0619e-06 132860000.0 4604.5 4137.7 3859.1000000000004 3461.2 5776.4 4403.9 3990.8 4450.9 6202.299999999999 6020.200000000001 6736.4 True False 5381.627030783215 4348.291256454371 4406.378408851803 4309.194155379173 4926.6992119508095 4869.917774927772 4715.876702248078 5081.82870530958 4797.488953037875 4660.232638789514 5063.565964818147 1.0628136511255049 0.8587409123661995 0.8702125023091417 0.8510196539987078 0.9729702834290511 0.9617565582761536 0.9313350976395236 1.0036066954826546 0.9474526423415859 0.9203459915737231 1.0 12.305938030810468 -6.797451653359939 24.507660059429202 0.9723048701364039 0.9040938316479543 0.13579452477645404 0.05882802225239182 145.0222443118098 98692.49502217249 0.007880766110546698 0.014893675241849131 1.594220343034169e-07 6.797451653359939 -0.06821103848844956 S(ph)LGHPEPLSNGRPQGNSR ddPTM_A549_PD325901_60min_R1 2 SLGHPEPLSNGRPQGNSR 18 1 P49768;P49768-2;P49768-7;G3V4M0;G3V2G7;G3V3P0;G3V3Z0;G3V499;H0YM52;G3V5B1;G3V4P4;G3V2B1;G3V449;P49768-4;P49768-3;P49768-5;P49768-6;G3V519 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 1 S(1)LGHPEPLSNGRPQGNSR;S(1)LGHPEPLSNGRPQGNSR 125.45 3.3517e-11 180792000.0 6795.700000000001 8543.8 7634.8 9504.8 10118.8 9157.7 8529.2 10145.2 9805.2 10540.6 10391.3 True False 7485.594461270071 9263.81601046871 8152.943439782025 10091.889909033001 9408.090395964924 9083.122727425754 8853.78337335733 9942.846027244563 9393.121542501496 9875.06471712995 9113.235975877968 0.8213980721100455 1.0165232234729042 0.8946266135719778 1.1073881918283972 1.0323545248764998 0.9966956579932835 0.9715301344980654 1.0910335311806376 1.0307119850033912 1.0835958536867127 1.0 13.153747709423879 -4.4064547965980765 1.0851922429157392 1.019329599879534 1.0946933041945145e-18 0.5057689593617802 0.057153813481079487 5.255273122729703 1.2424668160661265 0.007274359475594014 9.626688241899167 3.922339697550671e-05 4.4064547965980765 -1.019329599879534 S(ph)LGLDINMDSR ddPTM_A549_MK2206_60min_R1 4 SLGLDINMDSR 11 0 Q96H22-5;Q96H22-4;Q96H22;Q96H22-3 Q96H22-5 CENPN Centromere protein N 1 S(1)LGLDINMDSR;S(1)LGLDINMDSR;S(1)LGLDINMDSR;S(0.973)LGLDINMDS(0.027)R 84.29700000000001 0.00053101 7712500.0 2656.5299999999997 2651.78 2499.08 2893.95 3606.7200000000003 2884.43 3226.43 2938.7799999999997 4044.69 4058.8300000000004 4062.24 True False 3104.8873180772157 2786.744275331844 2853.48712238433 3602.967879914353 3076.1762657930954 3189.658468070326 3812.630567413619 3355.3610646362945 3128.5741730427044 3141.937484020142 3053.473695879532 1.0168377485180446 0.9126472185080152 0.9345052247330407 1.179957071441725 1.0074349977025179 1.0445999493542606 1.248620734004855 1.0988668640454118 1.0245950955020557 1.0289715245492328 1.0 11.576235701813905 S(ph)LGLDINMDSR ddPTM_A549_PD325901_60min_R1 4 SLGLDINMDSR 11 0 Q96H22-5;Q96H22-4;Q96H22;Q96H22-3 Q96H22-5 CENPN Centromere protein N 1 S(0.999)LGLDINMDS(0.001)R;S(0.986)LGLDINMDS(0.014)R;S(1)LGLDINMDSR;S(1)LGLDINMDSR 123.28 6.9876e-06 13553100.0 3549.14 3300.58 3258.94 3515.77 4095.59 3933.2000000000003 3550.9500000000003 4177.98 3295.9700000000003 3815.28 3776.64 True False 3909.446080061224 3578.731459986518 3480.111265998225 3732.9311280070024 3807.929887418465 3901.169323248303 3686.083345404399 4094.6469113380977 3157.451842944423 3574.382569680241 3312.1372220934586 1.1803394056210728 1.0804900944667253 1.050714699495028 1.1270460363497796 1.1496896511466508 1.177840488378843 1.1129017604755473 1.2362552143144747 0.9532974122819508 1.0791770781226957 1.0 11.693546729701236 -8.780041760779536 24.99943050509877 0.9779459821045535 1.1348171660575344 0.4733442486663162 0.05747820371766553 99.5793537368786 133822.51837524216 0.008680068300425553 0.009248510384551756 1.6594273329694988e-09 8.780041760779536 0.15687118395298083 S(ph)LGLGPGER ddPTM_A549_MK2206_60min_R1 2 SLGLGPGER 9 0 Q8N5C6-2;Q8N5C6 Q8N5C6-2 SRBD1 S1 RNA-binding domain-containing protein 1 1 S(1)LGLGPGER;S(1)LGLGPGER 91.75200000000001 0.0010244000000000002 11811200.0 1759.92 2071.69 2046.99 1834.08 2872.2 2528.5 2040.26 2356.0 3206.6 2843.5 2913.4 True False 2056.951470087087 2177.1301720965644 2337.283962357946 2283.4296823349805 2449.7031847803314 2796.0641917175376 2410.9488324467925 2689.9702149473947 2480.310219887985 2201.151375103483 2189.9223742505183 0.9392805399282979 0.9941586047503935 1.0672907815546937 1.0426989144382182 1.1186255794197824 1.2767868964645224 1.1009289008574648 1.2283404410021672 1.1326018899354136 1.005127579399616 1.0 11.096664016466322 -5.62356956173638 1.3319523048214437 1.0972464880896728 0.9195830429976465 0.32610025824761246 0.0806213612028483 0.8456834816468485 2.0005018512660615 0.013404876981321525 0.1690933581171711 2.3791971900981133e-06 5.62356956173638 -0.17766344509202636 S(ph)LGLGPGER ddPTM_A549_PD325901_60min_R1 1 SLGLGPGER 9 0 Q8N5C6-2;Q8N5C6 Q8N5C6-2 SRBD1 S1 RNA-binding domain-containing protein 1 1 S(1)LGLGPGER 87.777 0.0011374 10908000.0 4151.7 4640.9 4661.6 4808.5 4615.7 4807.3 4294.5 4339.4 5319.5 5152.6 5044.1 True False 4573.177527679996 5032.004930239966 4977.964208478013 5105.51012410416 4291.509155300559 4768.150942655236 4457.929547540571 4252.847262806553 5095.93991405955 4827.263956651782 4423.707677184381 1.0337883651911535 1.1375084651711787 1.1252923049486865 1.1541246611832487 0.9701159001609336 1.0778630259063788 1.0077360153187092 0.9613761968813955 1.1519612700319821 1.0912258017293444 1.0 12.111040338722416 -6.727697537493349 24.999976418668684 1.0544913004600476 1.1153529874491723 0.23157938101060394 0.06111596144902352 301.7926905192836 223602.50744192605 0.010289902745339379 0.021419204915950726 1.8719854226017828e-07 6.727697537493349 0.06086168698912475 S(ph)LGPGAGPR ddPTM_A549_PD325901_60min_R1 1 SLGPGAGPR 9 0 P78549-3;P78549-2;P78549;H3BUV2 P78549-3 NTHL1 Endonuclease III-like protein 1 1 S(1)LGPGAGPR 62.271 0.007255500000000001 8102000.0 2947.8 3391.5 3122.7 3314.9 3834.9 3790.5 3194.1 3646.1 3378.6 3885.0 3386.1 True False 3247.0584859443343 3677.313607470287 3334.6252003205523 3519.6538443158706 3565.549853686787 3759.6314247362716 3315.653223378588 3573.375675189886 3236.609191397988 3639.7004369817523 2969.6311662564244 1.0934214736295484 1.238306510672159 1.122908877779676 1.1852158221900722 1.200670943315021 1.2660263898953272 1.1165202133699201 1.2033062273166246 1.0899027556604348 1.2256405705662197 1.0 11.536068041393106 -9.263410914229262 0.8675622306156539 1.0174060773280824 1.1836095595351848 0.0 0.08132824568651281 0.21643065052771024 0.34703168034684734 0.013983717978974384 0.011001628375369965 5.452417283280805e-10 9.263410914229262 0.16620348220710235 S(ph)LGPSLATDK ddPTM_A549_MK2206_60min_R1 1 SLGPSLATDK 10 0 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 S(0.991)LGPS(0.009)LATDK 47.062 0.033914 2707500.0 3729.8 4441.1 3705.7 3978.8 5413.5 4738.0 3962.6 4882.8 6255.7 5438.1 5252.2 True False 4359.29905514502 4667.13302052819 4231.22398219329 4953.6061786151195 4617.18132122009 5239.372015170138 4682.55312727479 5574.951852947857 4838.793938300151 4209.629433075524 3947.933786654279 1.1041976108822629 1.1821710476262584 1.0717565721331634 1.2547338547977798 1.1695184293181806 1.3271174995085981 1.1860769152471202 1.4121188840080352 1.2256522524915094 1.0662867364457551 1.0 11.946882078289587 -10.545586663546025 0.9792078572238608 1.0070553196052978 1.2155177154636634 0.35793766027873286 0.09234642617353354 0.38640221026705374 0.6933380287246488 0.05170549358020069 0.01659724318978841 2.8471695902520593e-11 10.545586663546025 0.20846239585836557 S(ph)LGPSLATDKS ddPTM_A549_MK2206_60min_R1 2 SLGPSLATDKS 11 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 S(1)LGPSLATDKS;S(0.999)LGPS(0.001)LATDKS 110.8 6.1801e-05 42425000.0 7122.3 8319.3 6226.5 5438.299999999999 8788.3 6815.9 7486.0 6562.4 9212.7 9591.8 10685.599999999999 True False 8324.370116483286 8742.716835396677 7109.51132717881 6770.683744134566 7495.5527117906095 7537.154013971751 8846.10929964647 7492.640296507126 7126.038159658839 7425.005718205581 8032.070612442962 1.0363915505906416 1.0884760925598451 0.8851405409913902 0.842956202805998 0.9332030398461387 0.9383824393046911 1.1013485471532625 0.9328404415294641 0.8871981464679191 0.9244198758291616 1.0 12.971556237189503 S(ph)LGPSLATDKS ddPTM_A549_PD325901_60min_R1 1 SLGPSLATDKS 11 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 S(0.999)LGPS(0.001)LATDKS 163.11 1.114e-13 30826000.0 15139.0 14831.0 12945.0 15313.0 16975.0 13886.0 15548.0 16020.0 15934.0 16469.0 17249.0 True False 16675.90013525725 16080.860419399032 13823.52554460868 16258.849231653734 15782.734560570867 13772.917019888622 16139.68764819206 15700.46853255312 15264.34939197761 15429.144529382876 15127.482350419981 1.1023579303527846 1.0630229172901717 0.9138021267778839 1.074788841594804 1.0433153511583964 0.910456657680797 1.066911682613464 1.0378771674532632 1.0090475756895416 1.0199413340551358 1.0 13.884884280997126 -5.534117639352458 24.99830243945064 1.0066852649641163 1.0925242233281622 0.25133642229433584 0.051159231983481115 160.33492699405897 356628.3153700914 0.006300247173889108 0.02444383637369931 2.9233604064484713e-06 5.534117639352458 0.08583895836404598 S(ph)LGRGEFR ddPTM_A549_MK2206_60min_R1 2 SLGRGEFR 8 1 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 S(1)LGRGEFR;S(1)LGRGEFR 59.067 0.0037073 7560300.0 784.1 1280.78 934.76 904.55 1385.7 1048.95 1017.3999999999999 865.97 1538.5 1703.25 1600.62 True False 916.4369105955298 1345.9662313463107 1067.323023880778 1126.1647906067922 1181.8653656256909 1159.9491927633421 1202.2484105610883 988.7238994219006 1190.0322064796558 1318.484642041501 1203.141879135328 0.7617031095735385 1.1187094844654792 0.8871131845629378 0.9360199409035137 0.9823158732327328 0.9641000890077672 0.9992573871878836 0.8217849586721019 0.989103801569027 1.095867964457415 1.0 10.23259106537695 -8.06991146795286 0.009823793716528346 1.9221366496028132 5.7646911536681893e-05 0.13827584202317966 0.09386256778091888 2429.182242698823 14.551876247246808 1405.3248900682256 1440.3598814570885 8.513115625666818e-09 8.06991146795286 -1.9220790026912764 S(ph)LGRGEFR ddPTM_A549_PD325901_60min_R1 2 SLGRGEFR 8 1 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 S(1)LGRGEFR;S(1)LGRGEFR 51.927 0.007860800000000001 16578800.0 1262.32 1018.67 1353.46 1767.17 1548.05 1702.3899999999999 1976.92 1945.3600000000001 1899.7799999999997 1512.22 2070.7 True False 1390.4697971291305 1104.5168959226764 1445.3139346161502 1876.3240773657365 1439.320308482576 1688.5263002656052 2052.1527724121333 1906.558268694603 1819.93885326291 1416.7381711229193 1816.0170272488044 0.7656700219576897 0.6082084470298039 0.7958702550304525 1.033208416667929 0.7925698310566451 0.9297965134300845 1.1300294774884712 1.0498570443378303 1.00215957557405 0.7801348499849822 1.0 10.826562014280038 -6.206045763398787 0.8798868816279255 1.0086114413348044 0.6490706543330889 0.44430569196656 0.11335732237281007 0.38592789687905477 0.45157793926889894 0.01402925600594914 0.09725419752546562 6.222347142791239e-07 6.206045763398787 -0.35954078700171554 S(ph)LGSLPK ddPTM_A549_PD325901_60min_R1 1 SLGSLPK 7 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 S(1)LGSLPK 66.692 0.023683000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LGSVQAPSYGAR ddPTM_A549_MK2206_60min_R1 1 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.5)LGS(0.5)VQAPSYGAR 129.29 4.7689000000000004e-08 28348000.0 4343.8 6173.1 3673.0 4371.9 5567.5 3996.4 4215.3 3731.8 7943.1 5847.2 8360.1 True False 5076.92724428627 6487.284422558055 4193.886630487075 5443.0156962620495 4748.528125222655 4419.296395404379 4981.165446273011 4260.794078158189 6144.000532524244 4526.313458943231 6284.056442977877 0.8079060540519947 1.0323402536919086 0.6673852580005923 0.8661627637581695 0.7556469564382893 0.7032553630772563 0.7926672033379359 0.6780324328435046 0.9777124996052289 0.7202852966098297 1.0 12.617480423543492 -8.839111600345394 8.785238514110636 0.9899207131998456 0.7910436703884057 0.013793115725537874 0.1257990845926112 0.17429818388218749 17.92300541867895 0.016121907911119587 0.01714386680005556 1.4483996114971911e-09 8.839111600345394 -0.19887704281143992 S(ph)LGSVQAPSYGAR ddPTM_A549_PD325901_60min_R1 5 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.689)LGS(0.311)VQAPSYGAR;S(0.899)LGS(0.101)VQAPSYGAR;S(0.827)LGS(0.173)VQAPSYGAR;S(0.721)LGS(0.279)VQAPSYGAR;S(0.5)LGS(0.5)VQAPSYGAR 268.2 8.840899999999998e-83 3154786000.0 45229.0 53558.7 50631.49999999999 51817.299999999996 57591.3 53328.1 52746.6 48958.6 55616.6 56155.7 60661.0 True False 49820.61478417 58072.27961327401 54067.65806194314 55017.93693537328 53546.28576719915 52893.81363447519 54753.90072704703 47982.082315721316 53279.22771393633 52610.0195184083 53200.08156176162 0.9364762857803463 1.0915825297345854 1.0163078039490283 1.034170161402878 1.0065075878696843 0.9942430928995688 1.029207082389179 0.9019174577771546 1.0014877073465165 0.9889086252120065 1.0 15.69914083709281 -6.980244829740621 3.7761347256692375 0.9945443328219447 1.0244926841876307 0.09036260597221246 0.045038839209888375 0.4310343391917611 13.501843898884248 0.0061125993919709945 0.011644487067510626 1.0465384047900537e-07 6.980244829740621 0.029948351365686077 S(ph)LHLDK ddPTM_A549_MK2206_60min_R1 5 SLHLDK 6 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(1)LHLDK;S(1)LHLDK;S(1)LHLDK;S(1)LHLDK;S(1)LHLDK 73.665 0.014398 34651400.0 5500.7300000000005 6102.360000000001 5701.81 5379.210000000001 8566.96 6176.43 6036.360000000001 5711.28 8731.539999999999 8602.24 8856.349999999999 True False 6429.118744063448 6412.944058713031 6510.412395474412 6697.116691481919 7306.771532583286 6830.015723017587 7133.088476090566 6520.871430061445 6753.86013140421 6658.988009484853 6657.073872174631 0.965757458533847 0.9633277595908889 0.9779690777785661 1.0060150781073136 1.0975950804938899 1.0259786588167246 1.0715050806189172 0.9795401936754092 1.0145388591276008 1.0002875343352013 1.0 12.700672462296067 -6.241601987882541 3.6824521146649616 1.0176275571990547 0.9667326549665771 0.35935748971917114 0.03240146991836697 0.22419618597949043 6.6533541288277105 0.004733803994208976 0.012881190007420157 5.733212144025816e-07 6.241601987882541 -0.05089490223247761 S(ph)LHLDK ddPTM_A549_PD325901_60min_R1 3 SLHLDK 6 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(1)LHLDK;S(1)LHLDK;S(1)LHLDK 91.318 0.011433 64167000.0 7293.5 6974.300000000001 7580.0 7708.599999999999 9421.6 9681.0 7597.2 8515.099999999999 8731.4 7521.6 8349.3 True False 8033.9307508090815 7562.048737307984 8094.42438224286 8184.742714499177 8759.85931875549 9602.161145725322 7886.315603347359 8345.259650533275 8364.449622261405 7046.684892355715 7322.389030573452 1.0971734385136738 1.0327297150880501 1.1054348995178893 1.1177694438693582 1.1963116521370434 1.3113426650281828 1.0770140141993716 1.1396908325532817 1.142311558063495 0.9623477888068254 1.0 12.838098709160793 -10.610962943931236 0.7887180718473829 0.9956338985585815 1.1369992184225326 0.4120564477727858 0.06976048998331098 0.6658788936656542 0.7043977261552329 0.057486790864638745 0.013891487003748346 2.449272216472591e-11 10.610962943931236 0.14136531986395107 S(ph)LIAQDHR ddPTM_A549_MK2206_60min_R1 2 SLIAQDHR 8 0 O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39;H0YAN8 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 S(1)LIAQDHR;S(1)LIAQDHR 100.58 0.00072615 13319200.0 865.53 1091.08 712.8199999999999 783.26 1109.58 927.82 933.99 1058.68 1135.56 1114.54 900.0899999999999 True False 1011.6103038231722 1146.6113116205224 813.9085945940096 975.1587351618772 946.3622518517374 1026.0012965629292 1103.6838932376172 1208.751132071523 878.3574731166966 862.7646399183529 676.5728117797586 1.4951979834396254 1.6947345380378265 1.202987439671101 1.4413211973396824 1.3987589145982444 1.5164684106415414 1.6312862030833335 1.786579524074937 1.2982453001712164 1.2751985076799162 1.0 9.402101393068877 -9.488995826687304 1.2245142764196693 1.0691387301851014 1.507637832878947 0.40078859830621916 0.16964675919856234 0.2112770586300098 0.6548497102217806 0.04259123258478816 0.032782029735204464 3.243427340759085e-10 9.488995826687304 0.4384991026938456 S(ph)LIAQDHR ddPTM_A549_PD325901_60min_R1 2 SLIAQDHR 8 0 O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39;H0YAN8 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 S(1)LIAQDHR;S(1)LIAQDHR 96.009 0.00076718 25146000.0 1884.71 1553.52 1648.85 1655.22 1615.23 2079.46 1574.8899999999999 1491.8899999999999 2129.87 1986.42 2663.2 True False 2076.0443717498306 1684.4405824789148 1760.750876340519 1757.459180122634 1501.7818170409946 2062.5255672027647 1634.8233007628746 1462.1330835849358 2040.3589707224382 1860.9971021954416 2335.643283415762 0.8888533563711488 0.7211891449517515 0.7538612119593486 0.7524518802171012 0.6429842380916633 0.8830653130329147 0.6999456262739003 0.6260087291440493 0.8735747385784505 0.7967813901247051 1.0 11.189604236729176 -9.20547183334294 1.7749074102273197 0.9595612579124312 0.7464939012508475 0.2327961943870379 0.0964548653748917 0.16610713598940896 1.0811368439365465 0.017245012875641272 0.01580151316284186 6.23057555217178e-10 9.20547183334294 -0.21306735666158372 S(ph)LIKTPERLSLEGER ddPTM_A549_MK2206_60min_R1 1 SLIKTPERLSLEGER 15 2 A0A494C1F2;P35658-2;P35658;P35658-5;A0A494BZU9;H0YDS4;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(0.546)LIKT(0.454)PERLSLEGER 57.745 0.0020111 3820500.0 565.56 755.37 536.45 533.44 672.22 601.73 458.15 335.02 981.47 999.45 865.77 True False 661.012701385548 793.8151065538677 612.5266765381955 664.1328239470316 573.3373284844495 665.4046692039524 541.3899246103433 382.51011095572005 759.16861208553 773.6735508518293 650.7754149635722 1.0157309052963361 1.2197988557977446 0.9412259013694951 1.0205253743093647 0.8810064352485452 1.0224797278815443 0.8319151463960085 0.5877759088012435 1.1665600676202945 1.1888487688108753 1.0 9.346015939586493 -4.121273112572746 15.644751308242121 1.0156497548863281 0.9921032408943982 0.0 0.17458162611387534 0.0 0.0 0.02320241761816337 0.0 7.563570989702372e-05 4.121273112572746 -0.023546513991929974 S(ph)LIVEGK ddPTM_A549_MK2206_60min_R1 1 SLIVEGK 7 0 A0A494C198;B4DFG0;H0Y993;P35659;A0A494C028;H0Y8X0;D6R9L5 A0A494C198 DEK Protein DEK 1 S(1)LIVEGK 75.294 0.018198 5221500.0 1590.5 2240.4 2060.9 1510.4 3885.1 2525.7 1973.4 2116.4 4396.0 2507.5 2687.5 True False 1858.9375160084062 2354.4267904778926 2353.166609521049 1880.4480678044326 3313.6069365608478 2792.9678975760285 2331.941235896651 2416.4061812031696 3400.3130189694953 1941.0540084656175 2020.119578773346 0.9202116228867935 1.1654888231455804 1.1648650081149827 0.9308597805612456 1.6403023718887628 1.3825755301436018 1.154358019396381 1.1961698736024609 1.6832236342336866 0.960860945491287 1.0 10.98022497892493 -6.733331300013129 24.99347342819866 1.3298337067112098 1.0624735556082536 0.1918724679172349 0.22889121343766444 293.8869565247031 261320.44081265733 0.03832255987436371 0.0797623690048611 1.8478584488771916e-07 6.733331300013129 -0.2673601511029562 S(ph)LIYTDTLVR ddPTM_A549_MK2206_60min_R1 2 SLIYTDTLVR 10 0 Q5SYE7-2 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(0.991)LIY(0.002)T(0.006)DTLVR;S(0.999)LIYTDTLVR 84.479 0.00090216 14564300.0 2627.8 2658.7 2196.17 2325.9 3694.7 3007.3 2346.7 2819.8 3962.9 3696.2 4089.5 True False 3071.308396458276 2794.016473774132 2507.619929560795 2895.7456044136193 3151.2145243394934 3325.5304899158205 2773.0650138231836 3219.5152852753254 3065.3094774509113 2861.225852877613 3073.964285541803 0.9991360052242576 0.9089293870184544 0.815760918679253 0.94202317770365 1.0251304932724925 1.0818377121547063 0.9021136084326419 1.0473496066360017 0.9971844799461077 0.930793459876944 1.0 11.585884688021595 -6.5763878478392215 5.589433899845563 1.0025727860360316 0.9034452294746478 0.29811320658626694 0.061059877116981756 0.14277329580924905 9.584290367607293 0.007623860148527327 0.016192328348150105 2.6522359177019477e-07 6.5763878478392215 -0.09912755656138383 S(ph)LIYTDTLVR ddPTM_A549_PD325901_60min_R1 2 SLIYTDTLVR 10 0 Q5SYE7-2 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(1)LIYTDTLVR;S(1)LIYTDTLVR 177.44 6.2703e-11 23926000.0 4046.3 4229.1 4563.0 4259.9 5177.6 4550.200000000001 5104.0 4756.8 4850.4 4649.9 5776.3 True False 4457.077397271377 4585.501099027739 4872.672619548045 4523.024348065158 4813.943237750325 4513.144679814003 5298.235513015967 4661.92189236259 4646.5545557203595 4356.304520443101 5065.851718982599 0.8798278442635733 0.9051787050625849 0.9618664125697404 0.8928457836846319 0.9502732225089949 0.8908955354738258 1.0458726008822143 0.9202641828014003 0.9172306679070249 0.8599352610577398 1.0 12.30658913363921 S(ph)LKDHK ddPTM_A549_MK2206_60min_R1 1 SLKDHK 6 1 Q8NHV4-2;Q8NHV4;Q8NHV4-3;G3V2S2;G3V4I9;G3V4L2;G3V2V3;E9PK05;O14523;O14523-2 Q8NHV4-2;E9PK05 NEDD1;C2CD2L Protein NEDD1;C2 domain-containing protein 2-like 1 S(1)LKDHK 50.04 0.027339 7521300.0 2821.7 2627.5 1665.0 1306.3 3061.5 3037.3 3179.5 3247.8 2687.7 3427.9 3561.1 True False 3297.933976058421 2761.2285270401094 1901.1220364173653 1626.3435586420358 2611.157405544526 3358.705070003434 3757.17399388538 3708.185595970354 2078.9402413749563 2653.535009220056 2676.7805886399124 1.2320524102926644 1.0315483229214186 0.7102270707153239 0.6075744741814607 0.9754842875901419 1.25475546417871 1.4036167214565844 1.3853154837223713 0.7766569476025966 0.9913158442950053 1.0 11.386283173116293 -6.978005752284794 24.99538732362682 1.0026012473780024 0.8793150997601996 0.04978493492380476 0.24718094094834875 754.2600316039309 857175.4144019049 0.041977072213559834 0.07932534206011203 1.0519479405487544e-07 6.978005752284794 -0.12328614761780277 S(ph)LKEGLTVQER ddPTM_A549_MK2206_60min_R1 2 SLKEGLTVQER 11 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)LKEGLTVQER;S(1)LKEGLTVQER 102.15 6.5732e-05 35914000.0 5151.5 6031.2 6316.3 5595.700000000001 7961.1 5299.9 5610.6 5040.5 8270.1 7518.0 8656.0 True False 6020.947257917197 6338.162318661962 7212.04631749129 6966.646751200518 6790.032736005399 5860.7319002111035 6629.973395217268 5755.006310883848 6396.935554635947 5819.678578522235 6506.476306553336 0.9253775737034325 0.9741313147145639 1.108441186549362 1.0707249858396775 1.0435806442830606 0.9007535913576081 1.0189806406486943 0.8845043061307076 0.9831643509087923 0.8944439823227578 1.0 12.667660723387561 S(ph)LKEGLTVQER ddPTM_A549_PD325901_60min_R1 2 SLKEGLTVQER 11 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)LKEGLTVQER;S(1)LKEGLTVQER 124.25 1.4622e-06 61290000.0 4738.9 5430.700000000001 5169.3 5435.5 5748.200000000001 6065.6 5682.3 6562.0 5862.700000000001 5318.0 5682.7 True False 5219.989639406204 5888.364148043306 5520.11978352612 5771.238490083841 5344.466262213464 6016.203764643272 5898.543035973874 6431.115762210589 5616.311107088431 4982.220572424443 4983.763925603316 1.047399057685962 1.1815094446574297 1.1076206389246004 1.1580079988209304 1.072375486077319 1.2071606629952827 1.1835518543868062 1.2904134020417233 1.1269215779333972 0.9996903237789928 1.0 12.283020016060169 -10.111403643357137 0.9789047649209748 1.0129269920879524 1.1543142623652092 0.4512503212446525 0.0640549150267931 0.3357117871594793 0.643657599819835 0.025542831408969936 0.012270745355379047 7.737423294549861e-11 10.111403643357137 0.14138727027725673 S(ph)LLDASEEAIK ddPTM_A549_MK2206_60min_R1 2 SLLDASEEAIK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LLDASEEAIK;S(1)LLDASEEAIK 78.692 0.0010299 2149680.0 3219.6 2889.8 2396.1 2160.35 4420.799999999999 3778.9 3360.8 3242.7 4948.4 3757.3 4340.9 True False 3762.9897683374156 3036.8784766662266 2735.903009885673 2689.635846981795 3770.5061761983475 4178.780689769192 3971.413857100164 3702.3626553522563 3827.595300971031 2908.52332044182 3262.934727254779 1.1532531548687615 0.9307199593358886 0.8384792337502515 0.8242996173094397 1.1555567277224104 1.280681668212513 1.217129421538093 1.1346726075845175 1.1730529786574435 0.8913826244047678 1.0 11.67195441226725 -6.774356620790067 24.989563292708542 1.1175299818378022 0.9292467840771732 0.3307527218796519 0.12640155533311567 194.8072971257594 376872.3345000042 0.01794709723245035 0.0340683764069086 1.6812929008919307e-07 6.774356620790067 -0.18828319776062896 S(ph)LLDASEEAIK ddPTM_A549_PD325901_60min_R1 1 SLLDASEEAIK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LLDASEEAIK 148.18 1.4838e-11 1382700.0 1829.8 1227.5 968.94 1556.4 1394.0 1326.3 1399.7 988.57 1085.6 1282.0 1225.1 True False 2015.559948972435 1330.945732911625 1034.6980951095516 1652.5352931591376 1296.0902490389274 1315.4990525333637 1452.9663494452295 968.8521958318371 1039.9760072756922 1201.0543012125117 1074.4204665487568 1.8759508141601187 1.2387568687953947 0.9630290257157879 1.5380713087748559 1.20631567379037 1.224380113270736 1.3523256440864666 0.9017439875693869 0.9679413596953278 1.1178624557204564 1.0 10.069342976583235 -2.0000000000000004 0.25287318529885866 0.9667055054876523 5.175425633433195 0.4314719397299791 0.2082498322547448 28.79571960790714 0.35076511519793846 0.09270557359182459 52.58789286494138 0.00999999999999999 2.0000000000000004 4.2087201279455435 S(ph)LLDASEEAIKK ddPTM_A549_MK2206_60min_R1 3 SLLDASEEAIKK 12 1 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK 115.82 1.0662e-05 44355000.0 3021.1400000000003 3492.66 3297.0 2713.56 6231.700000000001 5283.389999999999 3901.66 4138.64 7101.6 4065.98 3770.98 True False 3531.0345722185716 3670.4214756429697 3764.5641766174494 3378.382321816337 5315.02518508307 5842.47482296956 4610.541118094925 4725.304894053435 5493.09893892488 3147.4722940542492 2834.541592246592 1.24571626744766 1.2948906749799636 1.328103347262491 1.1918619684598488 1.8750916196189962 2.0611709628642103 1.6265561707424858 1.6670437671398812 1.9379143893849788 1.1103990510012718 1.0 11.468899723157108 -6.719060334985785 24.999358642175537 1.556285382487294 1.2717648514708617 0.2144674401399933 0.3072507754148819 274.00715746022246 161635.20250599514 0.0571600112091983 0.11898735026788072 1.909587947884053e-07 6.719060334985785 -0.28452053101643227 S(ph)LLDASEEAIKK ddPTM_A549_PD325901_60min_R1 2 SLLDASEEAIKK 12 1 P18206;P18206-2 P18206 VCL Vinculin 1 S(1)LLDASEEAIKK;S(1)LLDASEEAIKK 130.06 3.1474e-08 56587000.0 3320.4 3856.6 3768.1000000000004 3535.3 4542.2 2784.5 4235.2 4053.7999999999997 3811.2000000000003 3504.0 4422.7 True False 3657.484563650715 4181.609216738878 4023.8259254260315 3753.667451751157 4223.1715417393225 2761.823955198032 4396.372853590365 3972.94377885542 3651.028517805011 3282.7568420036196 3878.735937805231 0.9429578662476027 1.0780855628715542 1.0374065133454016 0.9677553491499492 1.0888009932764304 0.7120422734322048 1.133455054452105 1.0242882842660066 0.9412933946390102 0.8463470817921046 1.0 11.921370845995087 S(ph)LLGIDTEDAIQGR ddPTM_A549_MK2206_60min_R1 2 SLLGIDTEDAIQGR 14 0 P49454 P49454 CENPF Centromere protein F 1 S(1)LLGIDTEDAIQGR;S(1)LLGIDTEDAIQGR 96.464 4.6155e-05 4562500.0 1023.13 1049.11 971.79 783.9100000000001 1501.03 1488.06 1253.05 1375.38 1751.28 1263.48 1195.76 True False 1195.8093308731086 1102.5052178888861 1109.6044346967149 975.9679851910571 1280.2304754024178 1645.5255215057157 1480.7129652580818 1570.3443269245972 1354.6178762194936 978.0589904750303 898.8197907028897 1.3304216743358186 1.2266143105579725 1.2345126867188678 1.085832772360115 1.4243461132528688 1.8307624492990877 1.6473969315919752 1.7471181021688074 1.507107309197279 1.0881591622611853 1.0 9.811888080686154 -6.782850066520556 24.826245503883758 1.3711938474051844 1.2209478743256041 0.11648007879088917 0.25198456341145536 607.9313601607083 704910.9148395199 0.046541165998070524 0.0880126236976783 1.6487314924317681e-07 6.782850066520556 -0.1502459730795802 S(ph)LLGIDTEDAIQGR ddPTM_A549_PD325901_60min_R1 2 SLLGIDTEDAIQGR 14 0 P49454 P49454 CENPF Centromere protein F 1 S(1)LLGIDTEDAIQGR;S(0.992)LLGIDT(0.008)EDAIQGR 172.85 1.1721e-22 22092000.0 3267.5 3637.5 3519.5 4257.1 3947.1000000000004 3472.6000000000004 4038.3 3899.6 3798.2 3944.5 4808.5 True False 3599.214194593636 3944.0448908073595 3758.354434472791 4520.051398424418 3669.8693127557754 3444.3202969368604 4191.979716342553 3821.8194188229827 3638.574862596294 3695.4435968274183 4217.084983592932 0.8534839133185137 0.9352538320076861 0.8912209379453138 1.0718426154583587 0.8702384056839821 0.8167538264790479 0.9940467722732517 0.9062704293824344 0.8628175331425855 0.8763028516629328 1.0 12.042030380069194 -11.014800059903727 1.3056218529834993 0.9999022829246259 0.9088275385006674 0.0 0.07641202536914408 0.5885713441518096 1.7899014615691262 0.04709001323586292 0.010713175538914866 9.664957310021334e-12 11.014800059903727 -0.09107474442395846 S(ph)LLKKPDGVK ddPTM_A549_PD325901_60min_R1 1 SLLKKPDGVK 10 2 Q13557-12;Q13557-8;Q13557;D6R938;H0Y9J2;E9PBG7;E9PF82;Q13557-10;Q13557-6;Q13557-11;Q13557-5;Q13557-3;Q13557-9;Q13557-4;H0Y9C2 Q13557-12 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 1 S(1)LLKKPDGVK 40.766999999999996 0.031473 8652700.0 2306.0 2224.7 2321.9 2355.3 3155.0 2558.8 2559.9 3251.7 3162.5 2413.1 3182.1 True False 2540.1034224125224 2412.18327658533 2479.4780967189563 2500.781531725593 2933.403684159122 2537.961981167438 2657.318395331031 3186.8422925906975 3029.5911228899963 2260.7364541777783 2790.7218729938763 0.9101958339142943 0.864358179125012 0.888471947245313 0.8961056119299928 1.0511272056688963 0.9094284907885577 0.9521975016737405 1.1419419195549805 1.0855940723465438 0.8100902049950497 1.0 11.446422635348231 -7.124523088269197 0.8216651161067348 1.0450081324157767 0.879805757533847 0.1026642487840762 0.09231468037126991 0.3888611461576428 0.5062329480212677 0.011466277909393937 0.03234189899606643 7.507181428522774e-08 7.124523088269197 -0.16520237488192968 S(ph)LLNARTPENHENLFLQPPK ddPTM_A549_MK2206_60min_R1 2 SLLNARTPENHENLFLQPPK 20 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.5)LLNART(0.5)PENHENLFLQPPK;S(0.5)LLNART(0.5)PENHENLFLQPPK 51.645 0.005295 5279400.0 1296.46 1701.5700000000002 1571.1100000000001 1799.46 2274.1 1809.48 1440.9299999999998 1559.98 2515.6000000000004 2167.07 2568.6 True False 1515.2707525962014 1788.172645006904 1793.9170226040158 2240.327780780829 1939.5829024820544 2000.9579725643875 1702.7283292999696 1781.1119422383867 1945.8206165877298 1677.5273819045212 1930.745730246406 0.784811137405866 0.926156467417744 0.9291316792786961 1.1603432527052195 1.004577077186917 1.0363653490037867 0.8819019007141161 0.922499485217599 1.0078078050906267 0.8688494583336105 1.0 10.914942465591459 -5.36071639931003 1.765732642641599 0.9996903942154474 0.7429151344580569 0.32261401135507306 0.07859753829320024 0.48597632937650215 1.7445827888859586 0.009469859079159947 0.19422675124123376 4.357963622277868e-06 5.36071639931003 -0.25677525975739046 S(ph)LLNARTPENHENLFLQPPK ddPTM_A549_PD325901_60min_R1 1 SLLNARTPENHENLFLQPPK 20 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.579)LLNART(0.421)PENHENLFLQPPK 100.08 2.5383e-08 6645100.0 1383.2 1660.3 1583.1 1829.2 2131.7 1768.2 1574.5 2096.2 1937.8 2286.3 2045.2 True False 1523.621445741979 1800.2193078233577 1690.5386859536507 1942.1855295853845 1981.9767459657678 1753.8003654448407 1634.4184590994594 2054.389646562911 1856.3610048810215 2141.9426278175997 1793.653365590986 0.849451446400272 1.0036606528096963 0.9425113672376935 1.0828098487945352 1.1049943004526583 0.9777811025749593 0.9112231440331501 1.1453660367013085 1.034960846110516 1.1941786907705307 1.0 10.808685392275855 -4.392558974896017 1.1380105603219792 1.0236032318950092 8.415721177957274e-10 0.2939045529800475 0.08278074931227872 7.813172421181854 1.8685583568491473 0.009190956155692154 15.369795123925867 4.0498694631477004e-05 4.392558974896017 -1.023603231053437 S(ph)LLRPGQAAELR ddPTM_A549_MK2206_60min_R1 2 SLLRPGQAAELR 12 1 Q96BY6;Q96BY6-2;F8WB48;F8WE73 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 S(1)LLRPGQAAELR;S(1)LLRPGQAAELR 118.08 5.6893e-06 48691800.0 3371.0299999999997 3176.3 3185.38 2434.98 3506.64 2699.94 2654.83 3035.43 4256.12 3932.1299999999997 4182.45 True False 3939.977450229371 3337.960102925786 3637.1147822000853 3031.5502093104046 2990.8179012179176 2985.6458587248767 3137.1782463238605 3465.711498114504 3292.115615627034 3043.8591020171098 3143.8322352523082 1.2532403625262682 1.0617487999189938 1.1569048568866107 0.9642849816593688 0.9513287215778833 0.9496835821092291 0.9978834783695404 1.1023843636606656 1.0471664418705298 0.9682002327878112 1.0 11.61830851758073 -4.826399576970652 0.9841079041809359 1.0161424609483696 1.5806035389534856 0.5934840834551954 0.05888329438246752 2.201505237347072 0.9138921257168906 0.008785744895502342 1.6133853614687326 1.4914215808293924e-05 4.826399576970652 0.564461078005116 S(ph)LLRPGQAAELR ddPTM_A549_PD325901_60min_R1 3 SLLRPGQAAELR 12 1 Q96BY6;Q96BY6-2;F8WB48;F8WE73 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 S(1)LLRPGQAAELR;S(1)LLRPGQAAELR;S(1)LLRPGQAAELR 169.64 3.5128e-16 171116000.0 2259.34 2830.7 2941.0 2223.42 3799.2 3303.9 2807.0 3346.9 2828.3999999999996 3507.2 4371.5 True False 2488.7065335618017 3069.2530233425127 3140.593945669691 2360.7556036468063 3532.357298528474 3276.994133804554 2913.8219210493394 3280.1434539077427 2709.5321840259494 3285.754793457502 3833.833213221688 0.6491431408593973 0.8005703046125278 0.8191785534223993 0.6157689895077597 0.9213643635686816 0.8547565717004145 0.7600283473471099 0.8555780263459446 0.7067423211530494 0.8570416631912845 1.0 11.904571860141836 -10.897231465784342 1.0368433432165154 1.0058605742048863 0.7758636019761093 0.2303044351228135 0.09584537485395124 0.38446514226585177 0.7023569316926496 0.06733061468971994 0.014487403394406411 1.2669764258786126e-11 10.897231465784342 -0.22999697222877702 S(ph)LLSGR ddPTM_A549_MK2206_60min_R1 2 SLLSGR 6 0 Q14126 Q14126 DSG2 Desmoglein-2 1 S(0.996)LLS(0.004)GR;S(0.995)LLS(0.005)GR 91.064 0.020828 3329400.0 693.49 1002.8 908.83 583.68 1403.3 1212.8 971.92 1167.9 1671.4 1083.5 1192.4 True False 810.5341577973403 1053.8382366948895 1037.7157599742904 726.6816262023904 1196.876428940269 1341.1376910085148 1148.505283263745 1333.453401543745 1292.8305686773456 838.7365974765689 896.2941714341728 0.9043171133204998 1.1757727209233417 1.1577847910288506 0.810762414129746 1.3353611649902069 1.4963141943258893 1.2813932298879125 1.487740793193007 1.4424176903980859 0.9357827197899712 1.0 9.807828504664553 -6.789637627311299 24.9995139012279 1.269834534655082 1.0342475371348994 0.30397981486407144 0.19528726902114085 252.89552288737985 224207.1471273519 0.031349694141051966 0.059253561075719344 1.6231638906139252e-07 6.789637627311299 -0.23558699752018253 S(ph)LLVSSPSTK ddPTM_A549_MK2206_60min_R1 2 SLLVSSPSTK 10 0 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 S(0.999)LLVSSPSTK;S(1)LLVSSPSTK 91.961 2.7425999999999998e-05 1497100.0 2025.4 2082.2 2136.3 1981.6 2601.1 2126.9 1907.5 2079.3 2982.1 2940.8 2975.2 True False 2367.2380037242547 2188.175086204724 2439.2594633023523 2467.092088957403 2218.4816356563333 2351.9671462780443 2254.068058920068 2374.0471425891856 2306.6591114351518 2276.471237525697 2236.3757286572863 1.0585153350530851 0.9784469837358224 1.0907198786166745 1.103165294339265 0.9919986195648365 1.0516869397836646 1.0079111618124224 1.0615600554807294 1.0314273589528105 1.0179287891361992 1.0 11.12694687728537 -10.36803626376535 0.37307854327647827 0.9893607646859673 1.0456065741318188 0.10293903021089501 0.036784513393382276 2.954177068280016 0.6288988374952562 0.06593231278818014 0.01323953169866824 4.285127379161528e-11 10.36803626376535 0.05624580944585145 S(ph)LMSVSGAETVNGEVPATPVKR ddPTM_A549_PD325901_60min_R1 1 SLMSVSGAETVNGEVPATPVKR 22 1 Q8IUW5 Q8IUW5 RELL1 RELT-like protein 1 1 S(0.845)LMS(0.076)VS(0.076)GAET(0.003)VNGEVPATPVKR 70.449 0.00013503 9060600.0 5932.0 6189.7 5444.7 5851.1 7324.1 6682.0 6061.2 7717.3 6640.0 7652.4 7699.7 True False 6534.212273092407 6711.327741754036 5814.210083640861 6212.509158187756 6809.68048277332 6627.584007410037 6291.862282815906 7563.372397395272 6360.943891221997 7169.226158033249 6752.685712419774 0.9676464374870071 0.9938753301386927 0.8610218705939717 0.9200056722263104 1.008440311422864 0.9814737853444525 0.9317570150264353 1.120053963637676 0.9419872569402612 1.061685152153218 1.0 12.721245696953197 -6.753410076237772 24.999345588386657 0.9829659737648606 0.9344675053190914 0.18027090690606284 0.060652742150574056 282.8876547629536 880766.5991432633 0.007990502262171188 0.016406598503947257 1.7643710522362217e-07 6.753410076237772 -0.048498468445769216 S(ph)LNDDGSSDPR ddPTM_A549_MK2206_60min_R1 1 SLNDDGSSDPR 11 0 P54259 P54259 ATN1 Atrophin-1 1 S(0.862)LNDDGS(0.069)S(0.069)DPR 45.358999999999995 0.046072 536710.0 0.0 0.0 185.44 0.0 225.42 0.0 0.0 0.0 0.0 0.0 149.82 True False 0.0 0.0 211.738180440382 0.0 192.26101661206835 0.0 0.0 0.0 0.0 0.0 112.61555917835267 0.0 0.0 1.8801858463007393 0.0 1.707233156899561 0.0 0.0 0.0 0.0 0.0 1.0 6.815262356435389 -11.061705160984665 1.411034172437338 0.9957989486477027 0.37066574628618487 0.0 0.7363688622074345 0.795385685353358 2.856239578020235 0.46014119014407084 0.10507336990132513 8.675506490060414e-12 11.061705160984665 -0.6251332023615178 S(ph)LNERAETPPLPIPPPPPDIQPLER ddPTM_A549_MK2206_60min_R1 1 SLNERAETPPLPIPPPPPDIQPLER 25 1 U3KPW8;A0A669KB72;Q8IX15;Q8IX15-3 U3KPW8 HOMEZ Homeobox and leucine zipper protein Homez 1 S(0.535)LNERAET(0.465)PPLPIPPPPPDIQPLER 45.22 0.007895699999999999 3281300.0 1299.3 1228.0 1734.6 950.93 1666.8 1304.0 1248.7 1195.5 1646.2 1618.9 2025.1 True False 1518.5900751648676 1290.499954787917 1980.59236298472 1183.9078926888694 1421.6159279966082 1441.9884144748546 1475.5726265653948 1364.9657860652003 1273.3383284412148 1253.1893656251202 1522.2117800833119 0.9976207614697042 0.8477795085236345 1.3011279960507995 0.7777550457690409 0.9339146803336406 0.9472981574192872 0.9693609298468545 0.8966990033348018 0.8365053700816347 0.823268734365288 1.0 10.571953374660586 S(ph)LNERAETPPLPIPPPPPDIQPLER ddPTM_A549_PD325901_60min_R1 1 SLNERAETPPLPIPPPPPDIQPLER 25 1 U3KPW8;A0A669KB72;Q8IX15;Q8IX15-3 U3KPW8 HOMEZ Homeobox and leucine zipper protein Homez 1 S(0.54)LNERAET(0.46)PPLPIPPPPPDIQPLER 53.615 0.0015885 7986600.0 838.88 869.98 760.55 796.09 1097.5 716.8 929.76 916.39 1035.2 966.53 890.96 True False 924.0424800491837 943.2962677950752 812.1654965586815 845.2626712484312 1020.4153861694565 710.9626184542827 965.1425255841941 898.1118825559521 991.694144004972 905.5031308509579 781.3775682607793 1.1825812738724424 1.2072220986516171 1.03940211435354 1.0817595815168457 1.3059184543021076 0.9098835791213857 1.2351807433280253 1.1493955278944141 1.269161266316262 1.1588547811354017 1.0 9.609876029090202 -11.091482751140436 1.441232947867509 1.0005359169695498 1.1645980124076636 0.0 0.11617720147054002 0.4779754915111633 1.7834442291790598 0.07439276979676328 0.01651692768324537 8.100601141721933e-12 11.091482751140436 0.1640620954381138 S(ph)LNLEDYKK ddPTM_A549_MK2206_60min_R1 1 SLNLEDYKK 9 1 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 S(1)LNLEDYKK 57.163999999999994 0.0058797 7642100.0 6371.0 3459.9 2834.8 2406.3 3094.7 2559.8 2265.9 2339.1 3523.6 4709.1 8994.1 True False 7446.269044004748 3635.9941315722435 3236.8172665681345 2995.843608022913 2639.473729524301 2830.6763369422792 2677.5846997153244 2670.674588193316 2725.5102260329636 3645.3110393880133 6760.616745468036 1.1014186019339638 0.5378198866264122 0.47877544141781553 0.4431317024487699 0.3904190740132793 0.4187009031150622 0.3960562771895385 0.3950341645950566 0.4031452053335227 0.5391980016958717 1.0 12.722939148779245 -10.742428041670351 0.963973015468384 1.0039806225679304 0.4899205629168953 0.03665844131049234 0.23582820149438558 0.38807890723093735 0.6327761082602689 0.13832606201729272 0.03442740604803825 1.8095557110224655e-11 10.742428041670351 -0.5140600596510352 S(ph)LNLEDYKK ddPTM_A549_PD325901_60min_R1 4 SLNLEDYKK 9 1 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 S(1)LNLEDYKK;S(1)LNLEDYKK;S(1)LNLEDYKK;S(1)LNLEDYKK 98.531 0.00034792 28701000.0 18890.1 14877.699999999999 13922.9 13787.400000000001 17208.9 15799.8 14801.3 14771.900000000001 15478.400000000001 15534.2 21084.9 True False 20807.80904584336 16131.495992292692 14867.791719199085 14639.016384542729 16000.206231482069 15671.131667207 15364.571571082144 14477.262866168636 14827.896675585931 14553.367960916843 18491.59096819353 1.1252579121847246 0.8723692850463586 0.804029882813893 0.7916580249759242 0.8652693139818651 0.8474734107066363 0.8308950591385016 0.7829106154830192 0.8018724133088744 0.787026275129564 1.0 14.17458173534511 -10.862451526463067 1.1288642772818505 0.9993784549622173 0.8484628491770784 0.0 0.1094012971223798 0.5201975654612992 1.1846797436321024 0.060709951240574135 0.014996510496944752 1.3726141560232435e-11 10.862451526463067 -0.15091560578513896 S(ph)LNLLPEAK ddPTM_A549_MK2206_60min_R1 2 SLNLLPEAK 9 0 Q99767-2;Q99767 Q99767-2 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 1 S(1)LNLLPEAK;S(1)LNLLPEAK 63.623999999999995 0.0066426 1624280.0 1375.06 1223.57 1208.49 890.06 1447.12 1343.1 1443.33 919.48 1659.5500000000002 1777.51 1955.4099999999999 True False 1607.1365110106992 1285.8444867099772 1379.8720539279414 1108.1247399563117 1234.2505649882726 1485.2259505223756 1705.5643782338684 1049.8191057894016 1283.664574756785 1375.96925646569 1469.827730429466 1.0934182814343236 0.8748266617165189 0.9387984900276437 0.7539147051148171 0.8397246421712559 1.0104762073637095 1.1603838619479052 0.7142463596619293 0.8733435546094327 0.9361432145953923 1.0 10.521431360118948 -7.250564627723843 24.27791523155891 0.9427111157084357 0.8927549084628956 0.03287857710365427 0.1268867529825045 1715.8567004042598 3830652.9086681292 0.01907243558570638 0.03281050056196318 5.616106983808534e-08 7.250564627723843 -0.04995620724554006 S(ph)LNLLPEAK ddPTM_A549_PD325901_60min_R1 2 SLNLLPEAK 9 0 Q99767-2;Q99767 Q99767-2 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 1 S(1)LNLLPEAK;S(1)LNLLPEAK 72.652 0.0031081 725030.0 569.59 803.25 1045.1 770.21 1115.5 831.48 878.63 686.06 1057.2 776.63 1013.9 True False 627.4143574900041 870.9426965061207 1116.0267706968357 817.7841224261753 1037.151128266086 824.7087025563156 912.0667454547844 672.3759950963419 1012.769560512032 727.5934492594954 889.1967276416493 0.7055967908856894 0.9794713244346474 1.2550954541373436 0.9196886324527122 1.1663910763783907 0.9274760881583871 1.02571986277299 0.7561611218246775 1.1389713086305724 0.8182592520209084 1.0 9.796358828846047 -5.295540084602352 4.170887487695394 1.042668981067959 0.687956721559208 0.2094198382822935 0.14571934451155458 0.15531350834563465 5.601524613891125 0.016908722682091825 0.15147889429644823 5.0636061119002155e-06 5.295540084602352 -0.35471225950875107 S(ph)LNPALDGLTCGLTSHDKR ddPTM_A549_MK2206_60min_R1 2 SLNPALDGLTCGLTSHDKR 19 1 A0A0A0MRE6;O94967-2;O94967;O94967-3;O94967-4 A0A0A0MRE6 WDR47 WD repeat-containing protein 47 1 S(1)LNPALDGLTCGLTSHDKR;S(1)LNPALDGLTCGLTSHDKR 85.80799999999999 1.0032e-05 4617300.0 674.05 699.76 510.06 514.45 917.3900000000001 828.36 574.25 530.75 1360.51 948.87 1122.9 True False 787.8131610597078 735.3747950833817 582.3941777147395 640.490273094538 782.443146259185 916.0165053791345 678.5837917876016 605.9854378537057 1052.3566572880316 734.5196079811644 844.0529395365915 0.9333693707556295 0.8712425022619114 0.6899972151444554 0.7588271340494175 0.9270071930426166 1.0852595405710608 0.8039588040060177 0.7179471920166626 1.2467898729975453 0.8702293109534529 1.0 9.7211896782945 -8.761670491086527 24.999999917075893 1.1165396625982378 0.8499706412045445 0.22281847853598657 0.13927239640020794 4.229847960238833 457541.0167113837 0.023854581149596207 0.02618464813109179 1.7311293075013945e-09 8.761670491086527 -0.2665690213936933 S(ph)LNPALDGLTCGLTSHDKR ddPTM_A549_PD325901_60min_R1 2 SLNPALDGLTCGLTSHDKR 19 1 A0A0A0MRE6;O94967-2;O94967;O94967-3;O94967-4 A0A0A0MRE6 WDR47 WD repeat-containing protein 47 1 S(1)LNPALDGLTCGLTSHDKR;S(1)LNPALDGLTCGLTSHDKR 115.11 1.467e-14 10691900.0 733.03 734.37 1042.75 1054.64 1023.6700000000001 874.9300000000001 1184.91 1002.02 962.42 1038.0700000000002 1189.4099999999999 True False 807.4466659718355 796.2579371717394 1113.5172855651367 1119.7827175387765 951.7709506697844 867.8048601621173 1230.002398457631 982.033925030517 921.9728343057042 972.5260830418657 1043.1201102912062 0.7740687366734996 0.7633425233738896 1.0674871230833407 1.073493556965524 0.9124269978881723 0.8319318663311491 1.1791570177994681 0.9414389726954494 0.8838606649509599 0.9323241623348314 1.0 10.02668957151763 -5.742370519637727 24.96925727708836 0.9644291141448249 0.7687054241732569 0.4193781990942501 0.09451176184455504 187.275971567134 245220.0258614978 0.013126235718995308 0.050670897682217594 1.8097954014181985e-06 5.742370519637727 -0.19572368997156797 S(ph)LPAEEGSSGK ddPTM_A549_MK2206_60min_R1 1 SLPAEEGSSGK 11 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(1)LPAEEGSSGK 154.28 4.0945e-13 17149000.0 4204.6 4340.7 4289.2 4083.1 6034.9 4989.4 4416.9 4908.0 6162.5 6586.2 6184.1 True False 4914.233687399526 4561.623089371265 4897.473056217032 5083.459683297321 5147.1742043836875 5517.374996304326 5219.393556720339 5603.724030119619 4766.703589490331 5098.372845685445 4648.4172975226975 1.0571842786185508 0.9813282236520185 1.0535786145592103 1.0935893569638149 1.1072960698099963 1.1869362501608292 1.1228324013642095 1.205512257495909 1.025446573402666 1.0967975806308405 1.0 12.18252387277693 -8.971199324206406 24.991051487628383 1.0112263602483451 1.100040397306704 0.10944580953728333 0.06383596019288583 170.58336749587207 148020.60325708555 0.0111032763824526 0.011653489285101694 1.068564337361986e-09 8.971199324206406 0.088814037058359 S(ph)LPAPQDNDFLSR ddPTM_A549_MK2206_60min_R1 2 SLPAPQDNDFLSR 13 0 O43353-2;O43353 O43353-2 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 1 S(1)LPAPQDNDFLSR;S(1)LPAPQDNDFLSR 91.845 0.00018053 6953800.0 3991.0 4842.799999999999 4027.9 4042.0 6001.5 4750.4 4647.1 5268.6 6482.3 6514.4 5942.5 True False 4664.583229418136 5089.277834728765 4599.116787078378 5032.290181452276 5118.687300138976 5253.084174939684 5491.417916963279 6015.4401844108 5014.069400105994 5042.792515552708 4466.813245343482 1.0442754091590518 1.1393531708616167 1.0296192239227415 1.1265951596920436 1.145937163474442 1.1760250286747194 1.2293815781727424 1.3466961464488614 1.122516014147896 1.1289463513635067 1.0 12.125030222390542 -10.046861153967543 1.1240327926642237 1.016732723968659 1.151850466873261 0.07711100031123042 0.08850660189652036 0.41261573188825346 1.0475519031230713 0.03005533963567406 0.016415914861814655 8.97715752666607e-11 10.046861153967543 0.135117742904602 S(ph)LPAPQDNDFLSR ddPTM_A549_PD325901_60min_R1 2 SLPAPQDNDFLSR 13 0 O43353-2;O43353 O43353-2 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 1 S(1)LPAPQDNDFLSR;S(1)LPAPQDNDFLSR 89.45100000000001 0.00018789 10536700.0 5584.6 6091.2 5458.200000000001 6279.4 6484.5 5606.6 5289.6 6760.799999999999 6087.2 5650.4 6929.299999999999 True False 6151.54448083477 6604.526801068261 5828.626274822954 6667.264276447884 6029.051090310566 5560.941708462303 5490.898622580188 6625.950540255003 5831.376152808212 5293.632779696706 6077.040028451798 1.0122599903956784 1.086799950328918 0.95912257407129 1.0971236400011755 0.9921032381033275 0.91507406277181 0.903548207165432 1.0903253079185404 0.9595750769299817 0.8710873640641997 1.0 12.56915307936861 -6.9796047085973765 24.931074059608548 0.9780048954399546 1.037566760861462 0.22233810970766898 0.06546311689500371 287.56181600717804 351511.9183435371 0.007865644316633643 0.014863621393016918 1.0480820700519319e-07 6.9796047085973765 0.05956186542150743 S(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_A549_MK2206_60min_R1 2 SLPEEDVAEIQHAEEFLIKPESK 23 1 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK 343.81 1.3838999999999992e-242 234685000.0 33676.0 35345.0 34004.0 31933.0 49639.0 42675.0 38305.0 41719.0 55362.0 47800.0 44522.0 True False 39359.685500848194 37143.9095292988 38826.278514315934 39756.58643352685 42337.168856385666 47190.84017462764 45264.52267204885 47632.79600907911 42822.59539494747 37001.946801458216 33465.95865531047 1.176111101619451 1.1099012555376089 1.1601723086499682 1.1879709421447626 1.2650816100158986 1.4101146977643586 1.3525541921048825 1.4233208287765757 1.2795866939300204 1.1056592516164676 1.0 15.030406721432309 -10.573576029499499 0.9735856159261208 1.0071423602320613 1.262700515147049 0.37792989646079767 0.10104161789831395 0.39155708787210536 0.688728756212389 0.06488922145524702 0.020078423663304708 2.669463398233714e-11 10.573576029499499 0.2555581549149877 S(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_A549_PD325901_60min_R1 3 SLPEEDVAEIQHAEEFLIKPESK 23 1 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK 364.82 6.674499999999997e-269 161084000.0 18564.0 18791.0 21732.899999999998 19791.600000000002 24167.0 19778.7 22195.199999999997 21174.8 20898.1 23455.5 21156.800000000003 True False 20448.603613905496 20374.583517020244 23207.825284544295 21014.082182015154 22469.593291623944 19617.62882480709 23039.850481679467 20752.452002690752 20019.825532100363 21974.515727059326 18554.64772400517 1.1020744730954934 1.0980851709009016 1.2507823177111064 1.1325508570463494 1.210995413432387 1.05728920950769 1.2417293405075829 1.118450337154187 1.0789655416739392 1.1843132811748123 1.0 14.179492990034886 -9.25609598286962 0.8014249671372322 1.0141993815425436 1.1571950789618728 0.0 0.07798268820296145 0.3088499462043101 0.42640755658775775 0.016886465029212563 0.013002980285308795 5.545031493806735e-10 9.25609598286962 0.14299569741932916 S(ph)LPELDR ddPTM_A549_MK2206_60min_R1 2 SLPELDR 7 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LPELDR;S(1)LPELDR 71.61399999999999 0.020382 3930400.0 491.71000000000004 494.16999999999996 403.39 334.08000000000004 601.44 508.68 341.61 454.98900000000003 737.77 549.69 547.46 True False 574.6986268446987 519.3211422292712 460.59676772997045 415.9296149974211 512.9689727227506 562.5081799655438 403.6761151285371 519.4850840953737 570.666272976598 425.5146472237148 411.51057287265354 1.3965585934593847 1.2619873618410793 1.1192829494383543 1.0107385870888306 1.2465511375366154 1.3669349393353696 0.9809617097091187 1.2623857522517024 1.3867596863743203 1.0340308980478978 1.0 8.684785687821362 -11.08648639896964 1.4320458251948072 1.0007575137101536 1.2378292749968518 0.2612969416549604 0.13403306373304247 0.4496300122376798 1.6557352745718614 0.10060998604990072 0.022379066500560943 8.194332854047356e-12 11.08648639896964 0.23707176128669816 S(ph)LPELDR ddPTM_A549_PD325901_60min_R1 2 SLPELDR 7 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LPELDR;S(1)LPELDR 66.27 0.024399 5872400.0 1274.5 1257.3500000000001 1606.71 1369.6799999999998 1365.89 1300.56 1345.76 1403.26 1551.99 1516.45 1701.43 True False 1403.8863017626886 1363.3112971702096 1715.7510025321133 1454.2820228310245 1269.954598464692 1289.9686705592935 1396.9736332281286 1375.2708784638269 1486.765257490607 1420.7010882010243 1492.164896253409 0.940838579762616 0.9136465417416463 1.149840079229912 0.9746121400406198 0.851081942520795 0.8644947175732398 0.9362059359094356 0.9216614610871193 0.9963813391024278 0.9521072984414664 1.0 10.543191258500487 -8.781990421226674 21.600304749810288 0.9982912506338714 0.9449008786096473 0.039693251063065205 0.07501424969433895 93.97631466168461 98773.22321007143 0.013443680780655906 0.01432676927593541 1.6519982342022405e-09 8.781990421226674 -0.05339037202422403 S(ph)LPELDRDK ddPTM_A549_MK2206_60min_R1 2 SLPELDRDK 9 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LPELDRDK;S(1)LPELDRDK 114.86 5.9219e-05 9990000.0 2611.7 1767.36 1913.48 1773.3899999999999 3032.5 2707.5 2087.76 2584.0 3168.3999999999996 3195.2 2923.3 True False 3052.4911100654854 1857.3110749950936 2184.8402367831227 2207.870629610501 2586.42326712846 2994.005852906956 2467.0789675968354 2950.28991316811 2450.7624588951203 2473.4021008372238 2197.363931024417 1.3891604694914628 0.8452450906160137 0.9943005825914982 1.004781501342468 1.1770573051695912 1.3625443699310849 1.1227448183545436 1.3426496501162994 1.1153193261675904 1.1256224178050092 1.0 11.101558115735354 -4.462406258760743 15.88534660188673 1.09765464919004 1.1050991773230932 0.0 0.1694235664596763 0.0 0.0 0.02193746527396295 0.0 3.448210271874822e-05 4.462406258760743 0.007444528133053074 S(ph)LPELDRDK ddPTM_A549_PD325901_60min_R1 3 SLPELDRDK 9 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LPELDRDK;S(1)LPELDRDK;S(1)LPELDRDK 81.625 0.00044004 10474100.0 4073.7 4234.1 3393.27 3663.2000000000003 4517.900000000001 3642.06 3722.8599999999997 4078.8 3708.8 3961.88 4501.08 True False 4487.259025100564 4590.922466575243 3623.557707590137 3889.4675442691787 4200.578289908876 3612.4002708811468 3864.535474527158 3997.4451342432994 3552.9320336994206 3711.7262206613314 3947.475694696989 1.136741394286155 1.163002085799453 0.9179430065796221 0.9853050012427592 1.0641175816615929 0.915116532758902 0.9789890485503805 1.0126585806756045 0.9000516554091528 0.9402784229039429 1.0 11.946714667847518 -5.75544653167742 24.999999999933312 0.9629917614873272 1.1498718256895202 0.6915247843607956 0.046671230191458066 61.223142102250236 255393.01842958102 0.007046925934645655 0.025930215099001955 1.756117085882267e-06 5.75544653167742 0.18688006420219294 S(ph)LPELDRDKSDSDTEGLLFSR ddPTM_A549_MK2206_60min_R1 2 SLPELDRDKSDSDTEGLLFSR 21 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LPELDRDKSDSDTEGLLFSR;S(1)LPELDRDKSDSDTEGLLFSR 102.27 2.3786e-10 21049200.0 986.8699999999999 1361.08 1003.34 1025.89 1787.92 1306.33 1305.54 891.6700000000001 2046.8000000000002 2391.8999999999996 2065.02 True False 1153.4295293449948 1430.3531583572799 1145.62869911051 1277.2330960539523 1524.9193364433024 1444.5649735283264 1542.7397188165178 1018.0669531248496 1583.2030680679618 1851.5681287533032 1552.218542347362 0.7430844935022529 0.9214895450187126 0.7380588930332057 0.8228436017279116 0.9824127819895928 0.9306453531625546 0.9938933705066364 0.6558786184742164 1.0199614454249097 1.1928527319054223 1.0 10.600115978633214 -6.753011871858154 0.22629840938178936 1.0382498594502068 0.6992477260799875 0.3490760303106336 0.11982284283836749 5.018743839546651 0.3963155449558497 0.10934068598846265 0.4884877097648514 1.7659895450003939e-07 6.753011871858154 -0.3390021333702192 S(ph)LPELDRDKSDSDTEGLLFSR ddPTM_A549_PD325901_60min_R1 1 SLPELDRDKSDSDTEGLLFSR 21 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(1)LPELDRDKSDSDTEGLLFSR 249.41 1.2156999999999997e-98 68444000.0 3142.6 3120.0 3787.9 3361.4 3884.4 3601.2 3930.1 4022.2 4499.0 4385.9 3911.7 True False 3461.634438540153 3382.9333496409517 4044.9696724931046 3569.0260437067113 3611.5731444525177 3571.873021174052 4079.66210613324 3941.974065645139 4309.922675693939 4108.973525497624 3430.5856983093404 1.00905056540232 0.9861095588744883 1.179090111197789 1.0403547258608339 1.0527570106271857 1.0411846067376602 1.1892027965206573 1.1490673640911582 1.2563226966806142 1.1977469408569523 1.0 11.744239191063341 -7.7380984362605165 24.879355580277622 1.1313110604597607 1.0538159413209731 0.30216601380177743 0.07602306337775337 383.9945625168068 409302.6955612693 0.015676403674039194 0.023243679452591044 1.827685909803449e-08 7.7380984362605165 -0.0774951191387876 S(ph)LPHLPGTPR ddPTM_A549_PD325901_60min_R1 1 SLPHLPGTPR 10 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 S(1)LPHLPGTPR 67.51899999999999 0.0013967 3788100.0 177.74 131.82 0.0 142.39 193.01 311.87 200.0 145.97 266.23 269.67 113.11 True False 195.78403395472768 142.92893402233022 0.0 151.18510690884708 179.45364344835252 309.33023412016894 207.61110944419931 143.05851383875026 255.041278939764 252.64299017783006 99.19818706336616 1.973665444406399 1.4408421993743654 0.0 1.524071269692384 1.8090415637709236 3.118305316634203 2.092892174648119 1.442148471396628 2.571027621471024 2.5468508816239344 1.0 6.6322418491830675 -6.51821514482555 20.45195466804174 1.863928737238506 1.1007034073995203 0.22231450359712135 0.7140693568776205 26.943985715111236 118155.14083222326 0.1143572967437019 0.24436715040357426 3.032388599273846e-07 6.51821514482555 -0.7632253298389857 S(ph)LPLDQTLPR ddPTM_A549_PD325901_60min_R1 2 SLPLDQTLPR 10 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 S(0.988)LPLDQT(0.012)LPR;S(1)LPLDQTLPR 83.182 0.00099426 3940700.0 1490.74 1154.3400000000001 1488.74 1238.78 1567.1100000000001 1788.2600000000002 1184.98 1281.0 1548.9499999999998 1085.4 1460.28 True False 1642.0788273752146 1251.620282956583 1589.7748489208761 1315.2966271264938 1457.0415998360065 1773.6970034557128 1230.075062345936 1255.4494500749406 1483.8530181187223 1016.867658764477 1280.6748174776085 1.2821981075644324 0.9773131054624383 1.2413571557939 1.027034036412987 1.1377139457663161 1.3849706258370498 0.9604897711416449 0.9803030659630277 1.1586493291414048 0.7940092558134931 1.0 10.322688484956686 -14.999999999963137 0.24499045386474913 0.224365203386154 1.1429323680530032 0.23553143748928806 0.14314369702801547 71.63260963391913 0.9159152588246613 27.041201274665948 0.06674815600601694 1.0000000000848801e-15 14.999999999963137 0.9185671646668492 S(ph)LPNLSR ddPTM_A549_MK2206_60min_R1 2 SLPNLSR 7 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 S(0.998)LPNLS(0.002)R;S(1)LPNLSR 83.499 0.014482 26796000.0 2011.6999999999998 2223.52 2438.8999999999996 2212.2 3006.8999999999996 2466.5 2173.1 2466.8 3356.7 3100.7 3448.8999999999996 True False 2351.225778657094 2336.687670578202 2784.772693464449 2754.1890993094325 2564.5889932163436 2727.5033928698067 2567.9241409379833 2816.4764542581634 2596.4128095484302 2400.2497164703254 2592.4429452023783 0.9069537221670837 0.9013458425006106 1.074188613723592 1.0623914036011417 0.9892557126329119 1.0520977512416902 0.9905422010116868 1.0864179130616494 1.001531321780253 0.9258640468490429 1.0 11.34009652304317 -5.742709786348974 24.999911237855798 1.0162158246982258 0.9041496673720987 0.501823051877822 0.044469212165933115 123.88733136237151 165359.85827556739 0.004895073298421184 0.01889264150182003 1.808382158572375e-06 5.742709786348974 -0.11206615732612712 S(ph)LPNLSR ddPTM_A549_PD325901_60min_R1 4 SLPNLSR 7 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 S(1)LPNLSR;S(1)LPNLSR;S(0.995)LPNLS(0.005)R;S(0.964)LPNLS(0.036)R 87.806 0.012863999999999999 49717700.0 5613.299999999999 4894.700000000001 4992.599999999999 5061.18 6137.9 5328.299999999999 5140.9 5372.799999999999 5134.5 5108.29 6007.200000000001 True False 6183.158083706949 5307.1935469511445 5331.427858942701 5373.797593826243 5706.795078605476 5284.9080913922335 5336.539762708421 5265.635289119939 4918.714820704723 4785.751697613777 5268.3524827783 1.173641684742821 1.0073725257183932 1.0119725049473414 1.0200148170405516 1.0832219554899563 1.0031424641134115 1.0129428090001604 0.9994842422432358 0.9336343452309794 0.9083962611191837 1.0 12.363136157998401 -7.847448070121168 1.2474517010362072 0.9696116127544949 1.0516105724204001 0.421349232964946 0.0505095139496544 0.35705617870836426 1.123374240494546 0.008465736219573994 0.01324277092480838 1.4208620993969698e-08 7.847448070121168 0.0819989596659052 S(ph)LPPGLLR ddPTM_A549_MK2206_60min_R1 2 SLPPGLLR 8 0 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 S(1)LPPGLLR;S(1)LPPGLLR 70.256 0.0066825 3899100.0 1492.77 1470.8899999999999 1218.16 1045.92 1790.83 1204.27 1114.4 1165.29 1961.4 1673.44 1976.46 True False 1744.7130812775022 1545.752018320846 1390.9134053346404 1302.1704469531328 1527.4012792981569 1331.7050520702703 1316.8720549727514 1330.4734260509558 1517.1460317121846 1295.4087417454439 1485.650434479021 1.1743765833376056 1.040454727738764 0.9362319513758279 0.8764985468535 1.028102737932276 0.896378462365048 0.8863942852307274 0.8955494476851941 1.0211998707786252 0.8719472035154152 1.0 10.536878982119756 -5.361190403421635 2.991522604318511 0.9755224509682026 1.1869419434661221 0.46623634936125324 0.06641920253723578 0.22526392286496333 3.1335195194711383 0.009324288366549846 0.0987761932997917 4.353209783841546e-06 5.361190403421635 0.21141949249791958 S(ph)LPPGLLR ddPTM_A549_PD325901_60min_R1 2 SLPPGLLR 8 0 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 S(1)LPPGLLR;S(1)LPPGLLR 94.85 0.0025247 7544000.0 2986.2 3272.9 3025.3999999999996 3300.6000000000004 3998.2 3701.8999999999996 3477.0 3495.9 4061.1 3293.7 3916.7 True False 3289.3568256757476 3548.7187692435486 3230.721837208118 3504.4705657935274 3717.380225041206 3671.752953761031 3609.3191376874056 3426.1715320195035 3890.4260898556686 3085.735219893643 3434.9707300069517 0.9576084002523918 1.0331147040767845 0.9405383891587279 1.0202330212538477 1.0822159829681235 1.068932821373299 1.0507568830666867 0.9974383484812314 1.1325936654627025 0.8983294072748613 1.0 11.746082090298263 -6.5285865298315295 6.169796781870289 1.0594642597830517 0.9820923645070184 0.03337704745665515 0.06347301959709453 0.14244393694024252 22.63109227582955 0.007460982549442691 0.016253389381902097 2.960829984045233e-07 6.5285865298315295 -0.07737189527603328 S(ph)LPQGTSAQK ddPTM_A549_MK2206_60min_R1 1 SLPQGTSAQK 10 0 A0A087X0J2 A0A087X0J2 UBXN8 1 S(0.98)LPQGT(0.01)S(0.01)AQK 48.568000000000005 0.0095009 5648800.0 362.79 319.29 370.3 278.75 586.5 473.88 266.43 521.57 577.74 497.23 475.26 True False 424.02008263608246 335.5404972021452 422.81410815936965 347.04376251356285 500.22662693185225 524.0256670639144 314.8368822742195 595.504144741135 446.8828124611998 384.90539765876713 357.2398254912818 1.186933965307377 0.9392583728331652 1.183558153343931 0.9714587729302097 1.4002543704188992 1.4668735949113907 0.8813039863101794 1.6669590069421525 1.2509322325601284 1.077442575528748 1.0 8.480749112439971 -4.927509447314753 19.988385702915007 1.1627633434736528 1.8679773810794773 0.0 0.23565137950654455 4680.596218109576 1976099.510813731 0.030980372438797657 77917.38967148245 1.1816546074416968e-05 4.927509447314753 0.7052140376058245 S(ph)LPRDER ddPTM_A549_MK2206_60min_R1 1 SLPRDER 7 1 Q8IV16 Q8IV16 GPIHBP1 Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 1 S(1)LPRDER 48.283 0.016012000000000002 3502700.0 294.12 380.73 529.62 269.84 558.7 344.61 394.66 415.97 523.99 384.73 451.89 True False 343.7602654563927 400.10753077068705 604.7280798362552 335.950812113578 476.51597010541457 381.0764014663954 466.36461343821463 474.93502135469777 405.3071016400874 297.8192257934105 339.6732414704696 1.0120322224035962 1.1779188994652423 1.7803229869339852 0.9890411463064418 1.402865789611637 1.1218911440203196 1.3729801364961487 1.3982114672874153 1.193226466369515 0.8767815342301617 1.0 8.408003760896197 -9.803801004587536 0.8408040981689264 1.0220735483461507 1.2850056154646161 0.24553988859054188 0.2154292729154808 0.6094758558307273 0.8957920882604604 0.07533523936968588 0.0412819928465174 1.5710825155229303e-10 9.803801004587536 0.2629320671184654 S(ph)LPRPAK ddPTM_A549_MK2206_60min_R1 2 SLPRPAK 7 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;H0Y6F6;Q8NEY1-5 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(1)LPRPAK;S(1)LPRPAK 94.11399999999999 0.0033637 32449000.0 2769.2400000000002 2919.6099999999997 3204.1000000000004 2703.33 4763.9 3220.16 3316.8999999999996 3077.05 4527.1 4993.5 5197.6 True False 3236.6200105822822 3068.2056783374187 3658.489559690619 3365.6459713570957 4063.1366207001724 3560.915193830788 3919.5377953509715 3513.2312605704087 3501.719078293175 3865.464881863632 3906.8924735376163 0.8284384667622001 0.7853314876514166 0.9364193113761144 0.8614636809570466 1.039991924072863 0.911444381423287 1.0032366700386575 0.8992393019174252 0.8962926678968555 0.9893962805594001 1.0 11.931805834519798 -5.9166926650184575 1.6174978530866746 0.9501912841006601 0.7999121679672074 0.48580314751531195 0.05458295461670944 0.28835304312245735 1.3460167733491164 0.008035063362547076 0.04578049151304023 1.2114551346136079e-06 5.9166926650184575 -0.15027911613345268 S(ph)LPRPAK ddPTM_A549_PD325901_60min_R1 4 SLPRPAK 7 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;H0Y6F6;Q8NEY1-5 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(1)LPRPAK;S(1)LPRPAK;S(1)LPRPAK;S(1)LPRPAK 94.302 0.003357 56130300.0 5376.7 5524.38 5897.0 5625.639999999999 6903.8 6283.1 6599.7 6944.099999999999 7377.4 7004.900000000001 6998.599999999999 True False 5922.538625882662 5989.9388904132975 6297.205881541706 5973.123006044567 6418.9009048170365 6231.932516755167 6850.855194994414 6805.594477958936 7067.353533599572 6562.609418536289 6137.816567780696 0.9649259733456202 0.975907120107881 1.025968406191494 0.9731674024602402 1.045795493223411 1.0153337832656184 1.1161713810342069 1.1087973064694723 1.1514442400736289 1.0692091146850922 1.0 12.58350981533004 -7.178395340822465 1.4841639777448346 1.078663769332288 0.9868525877154498 0.5213660415459827 0.04195499143245322 0.3708505954193194 1.5988141577267934 0.009512470529098097 0.019437957863813523 6.631391361033292e-08 7.178395340822465 -0.09181118161683821 S(ph)LPRPHDFFDAQTLDAIR ddPTM_A549_PD325901_60min_R1 3 SLPRPHDFFDAQTLDAIR 18 1 Q6ZN18-2;Q6ZN18;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(1)LPRPHDFFDAQTLDAIR;S(0.993)LPRPHDFFDAQT(0.007)LDAIR;S(1)LPRPHDFFDAQTLDAIR 150.09 1.0997e-17 16595700.0 2433.8900000000003 2599.0 2822.34 2498.2799999999997 2840.6099999999997 3140.46 2918.14 3129.3900000000003 2612.6 2759.7 3463.8 True False 2680.976721064882 2818.0268511912923 3013.880964509143 2652.5930815944525 2641.095353172502 3114.885134976196 3029.1914145674796 3066.971861491036 2502.801507561234 2585.4520710266506 3037.7745588373064 0.8825463078771102 0.9276616143200167 0.992134507065821 0.8732027443832829 0.8694178261152364 1.0253839034613559 0.9971745288850165 1.0096114119360144 0.8238931030218283 0.8511007057798983 1.0 11.568799092317853 -5.273472826731367 5.637476060135413 0.9325806313640735 0.8811767217502151 0.045472402812886004 0.06927362307921708 0.44898763746191833 56.27068575734925 0.010768973235897749 0.08611607313789663 5.327545570739259e-06 5.273472826731367 -0.051403909613858434 S(ph)LPRPSK ddPTM_A549_MK2206_60min_R1 2 SLPRPSK 7 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8;A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;E9PNV5;Q8IVL1-5 Q8IVL0-3;A0A0A0MTL4 NAV3;NAV2 Neuron navigator 3;Neuron navigator 2 1 S(0.999)LPRPS(0.001)K;S(1)LPRPSK 88.49600000000001 0.0035625 43049000.0 8226.5 8835.9 8618.3 8668.0 11936.1 8549.6 8695.5 9131.4 14341.4 13362.099999999999 12307.5 True False 9614.932081385192 9285.60956881968 9840.50453240587 10791.660389121309 10180.315501656058 9454.312997234829 10275.35979362488 10425.80391373967 11093.0957985098 10343.592329618517 9251.20808028017 1.0393163787852024 1.003718594181536 1.0636994052032882 1.1665136375134355 1.1004309289460659 1.0219544210001714 1.110704645756243 1.126966751073653 1.1990969938462186 1.118080172865949 1.0 13.175426058682977 -5.994425911554059 9.558418295340397 1.0992023757607126 1.0244066066679203 0.2631892371499377 0.054129289470120474 0.2039635787402489 230.51171068972513 0.01042284922906847 0.03130853240401469 1.0129175326931304e-06 5.994425911554059 -0.07479576909279229 S(ph)LPRPSK ddPTM_A549_PD325901_60min_R1 4 SLPRPSK 7 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8;A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;E9PNV5;Q8IVL1-5 Q8IVL0-3;A0A0A0MTL4 NAV3;NAV2 Neuron navigator 3;Neuron navigator 2 1 S(0.993)LPRPS(0.007)K;S(1)LPRPSK;S(0.999)LPRPS(0.001)K;S(0.997)LPRPS(0.003)K 80.688 0.004393 71246000.0 12347.5 11939.130000000001 13759.07 12574.34 14589.369999999999 15528.509999999998 14508.599999999999 15334.8 17875.1 16531.57 15188.810000000001 True False 13601.009110250921 12945.282385480388 14692.843230209266 13351.028423401873 13564.662981794161 15402.050963021074 15060.73271241055 15028.935384082115 17123.871709334686 15487.763848904617 13320.682659799551 1.0210444507695815 0.9718182405581898 1.103009778511634 1.0022780937266753 1.018315902287119 1.1562508736510089 1.1306276935687607 1.1282406290961269 1.285510070817374 1.1626854452170903 1.0 13.70138039924621 -7.257401538184136 23.456689495958717 1.1384043172506233 1.0236947407519448 0.4346875689405316 0.06832035880809727 178.6837542687031 1038005.4021653034 0.015289902113433786 0.025852600053527106 5.528387315154829e-08 7.257401538184136 -0.11470957649867852 S(ph)LPS(ph)SPERR ddPTM_A549_MK2206_60min_R1 1 SLPSSPERR 9 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 S(0.981)LPS(0.685)S(0.334)PERR 54.198 0.033223 10050000.0 1521.6 1732.2 1552.0 1373.0 2468.2 1874.9 1879.8 1690.4 2535.2 2132.3 2510.5 True False 1778.4088804516743 1820.3615811755942 1772.0969372490981 1709.3850616363115 2105.1310496047695 2073.3006735421045 2221.335327474677 1930.0193766328864 1960.981247882498 1650.611949053335 1887.073563724832 0.9424162971905197 0.9646479163125167 0.9390714656355075 0.9058391228067512 1.1155532513790936 1.098685665146877 1.1771323440566126 1.0227578901711099 1.0391652374228497 0.8746940134094437 1.0 10.88193494922861 -6.747918465219346 24.978531693634213 1.0431911111517593 0.9399745476196071 0.33853293191465816 0.07306749768293937 186.96183674173346 345390.9656924122 0.008727708631533508 0.018088191860269786 1.7868230028916062e-07 6.747918465219346 -0.10321656353215225 S(ph)LPS(ph)SPERR ddPTM_A549_PD325901_60min_R1 1 SLPSSPERR 9 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 S(0.932)LPS(0.582)S(0.486)PERR 54.471000000000004 0.032285 13424000.0 1651.7 1889.0 1673.7 1907.1 1906.5 1675.7 1755.8 1830.2 1917.0 1561.4 1704.1 True False 1819.379368082726 2048.1926594460756 1787.2873467757095 2024.8972356616496 1772.5940170679448 1662.0536547765644 1822.6179298106256 1793.6952252358751 1836.4351565470743 1462.8129375298095 1494.5065031799331 1.2173780202438365 1.3704809280441657 1.1959046969503395 1.3548935594145484 1.186073137384355 1.1121086801831461 1.2195449975845232 1.2001923186144348 1.228790341587409 0.9787932902381571 1.0 10.545453459419832 -14.999999762503148 0.18094450187703698 2.7852798603132205e-10 1.2865531340703884 0.6762845039327833 0.06638686570551705 23.09177778793642 0.2572787912357539 8.173085664363052 0.07386106503424054 1.0000005468568616e-15 14.999999762503148 1.2865531337918603 S(ph)LPSHMEEAPNVFQLYQR ddPTM_A549_MK2206_60min_R1 2 SLPSHMEEAPNVFQLYQR 18 0 Q5THJ4-2;Q5THJ4;H3BLS7 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 S(0.802)LPS(0.198)HMEEAPNVFQLYQR;S(0.764)LPS(0.236)HMEEAPNVFQLYQR 128.05 6.233899999999999e-13 4682000.0 725.55 787.54 946.5799999999999 863.24 1230.9 853.24 905.6500000000001 709.1 1116.8400000000001 1290.28 1158.65 True False 848.0051020055951 827.6224221446878 1080.8192776167868 1074.7338387523164 1049.836240563371 943.5292904651272 1070.19488207652 809.617096527673 863.8775232269998 998.8048518616214 870.9252278867857 0.9736830153183138 0.9502795368011466 1.2410012283595095 1.2340139019282428 1.2054263752477294 1.0833642892105768 1.228802252833165 0.9296057463992967 0.9919077959460578 1.1468319206748931 1.0 9.766405053274571 -8.269948973991914 24.977912044002824 0.9910789391861913 1.1332229673950485 0.1940511147124765 0.10687678170933841 569.0556523547784 1670325.312563364 0.016309358751821254 0.019879480793194078 5.370948968695169e-09 8.269948973991914 0.1421440282088572 S(ph)LPSHMEEAPNVFQLYQR ddPTM_A549_PD325901_60min_R1 2 SLPSHMEEAPNVFQLYQR 18 0 Q5THJ4-2;Q5THJ4;H3BLS7 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 S(0.798)LPS(0.202)HMEEAPNVFQLYQR;S(0.785)LPS(0.215)HMEEAPNVFQLYQR 109.37 9.3818e-10 6626200.0 1663.65 1560.19 1622.79 2167.62 2373.05 1880.62 1990.02 2163.62 2320.0299999999997 2269.8500000000004 2049.64 True False 1832.5425232855996 1691.6726867872803 1732.922288029009 2301.5089643778015 2206.375154578069 1865.3048542375727 2065.751300080727 2120.4649017729457 2222.5272072216517 2126.531283624975 1797.5472737384648 1.0194683333553465 0.941100527091568 0.9640482413711149 1.2803607437768343 1.2274365113020593 1.03769446372233 1.1492055481714607 1.1796434690492952 1.2364221179003159 1.1830182797931665 1.0 10.811813997296742 -6.215952188861978 24.78631445940782 1.1334393073962135 0.9714950565544294 0.4781228404743525 0.08318772252727548 366.4267179165172 199668.03895914264 0.014604072252138835 0.038638625987970694 6.082019540681472e-07 6.215952188861978 -0.1619442508417841 S(ph)LPSHMEEAPNVFQLYQRPTSASR ddPTM_A549_MK2206_60min_R1 1 SLPSHMEEAPNVFQLYQRPTSASR 24 1 Q5THJ4-2;Q5THJ4;H3BLS7 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 S(0.853)LPS(0.147)HMEEAPNVFQLYQRPTSASR 108.57 2.2161e-11 2012900.0 445.21 470.32 381.57 503.7 539.79 391.42 333.84 334.74 651.45 483.93 682.89 True False 520.3505636605486 494.25727910085755 435.6823636250892 627.1065226119523 460.38760605548936 432.83980459643254 394.49440670504606 382.19042009825586 503.8976151518827 374.6098768960186 513.3095661948018 1.0137168639149707 0.9628834365289932 0.8487711749750383 1.221692646916236 0.8969004989881125 0.8432334659279838 0.7685311801793594 0.7445612653032341 0.9816641814944331 0.7297932895991529 1.0 9.003685337081826 -5.296163781769706 4.998954669178401 0.9506623442866579 1.015401057446338 0.0 0.14338858125824136 0.6917893131654081 44.14127716498565 0.017990266711403437 0.13436328908790032 5.0563394063217414e-06 5.296163781769706 0.06473871315968005 S(ph)LPSS(ph)PER ddPTM_A549_MK2206_60min_R1 1 SLPSSPER 8 0 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 S(0.986)LPS(0.238)S(0.775)PER 64.374 0.010884999999999999 4079300.0 884.41 885.32 596.73 526.17 897.13 811.74 626.23 718.23 1144.2 1191.2 987.56 True False 1033.6767862514898 930.3790064925403 681.3552869617625 655.0816736206692 765.1633654209246 897.637788010597 740.0078849475825 820.0413019871253 885.0405269119414 922.1070926756698 742.3215967305694 1.3924918671424156 1.2533368429400924 0.9178707583918848 0.8824769163471281 1.0307707182317718 1.2092303281543897 0.99688314095511 1.1046981599334564 1.1922602424743582 1.2421935408277698 1.0 9.535900532269876 -5.557956654355406 6.172150136114727 1.0685729222471705 1.3609231899073175 0.46393873690052956 0.11132350322176882 0.1008504896306593 10.818198223819243 0.015493552827185694 0.06410776718386478 2.7672178194352274e-06 5.557956654355406 0.29235026766014705 S(ph)LPSS(ph)PER ddPTM_A549_PD325901_60min_R1 2 SLPSSPER 8 0 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 S(1)LPS(0.076)S(0.925)PER;S(1)LPS(0.06)S(0.94)PER 91.095 0.0030161999999999997 9575000.0 1921.6599999999999 2052.91 2038.07 2187.2 2132.29 2219.7 1915.22 2055.97 2357.9 2360.7 2768.3 True False 2116.745508548678 2225.91593038827 2176.3856861105137 2322.2983765083936 1982.5253064011595 2201.6234991391884 1988.1047451485983 2014.9620654727362 2258.805662818125 2211.6449991204186 2427.8166496995545 0.8718720620070828 0.9168385638444856 0.8964374168781832 0.9565377915979697 0.8165877380594204 0.9068326882969693 0.818885868253119 0.8299482029345545 0.9303856051475942 0.910960471168246 1.0 11.24544375709701 -9.448529636168946 1.25894401710251 0.9830975048520617 0.8798978664812989 0.23613169105909915 0.04833026957478567 0.23319041853890293 0.7644466936673531 0.011026871788028088 0.00870568379119699 3.560166946986745e-10 9.448529636168946 -0.10319963837076285 S(ph)LPSS(ph)PERR ddPTM_A549_MK2206_60min_R1 1 SLPSSPERR 9 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 S(0.897)LPS(0.16)S(0.943)PERR 47.99100000000001 0.0082495 12372000.0 659.01 778.44 1029.1 781.59 1067.4 905.98 771.07 1166.4 1302.2 1111.3 1180.8 True False 770.2347767524043 818.0592710139301 1175.0418544607273 973.0795850869085 910.3868739762302 1001.850202259148 911.1634381082557 1331.7407719501878 1007.2537791860956 860.25655816863 887.5747715778857 0.8677970593768902 0.9216792739158478 1.3238792855409771 1.0963353356213772 1.0257016119980407 1.1287502014935702 1.026576540124541 1.500426572042698 1.1348382259620229 0.9692215075461296 1.0 9.79372485073378 -5.549969643732043 24.582820895202786 1.1089588388805616 0.8812673914337433 0.2663458157154214 0.1495317501118167 156.33480408073203 141861.0918428958 0.020176633646326762 0.07814780664868855 2.818579937169848e-06 5.549969643732043 -0.22769144744681824 S(ph)LPSS(ph)PERR ddPTM_A549_PD325901_60min_R1 2 SLPSSPERR 9 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 S(0.875)LPS(0.223)S(0.902)PERR;S(0.922)LPS(0.172)S(0.906)PERR 53.6 0.0053373000000000006 48262000.0 2020.79 2273.7 1616.5900000000001 2333.5 2310.0 2379.2 1979.37 2063.6499999999996 2478.3999999999996 2163.04 2010.3400000000001 True False 2225.939113173028 2465.3126785508434 1726.3015187453814 2477.6349952369874 2147.7535690673762 2359.824584021245 2054.696008502825 2022.488881847893 2374.241466868161 2026.465285253285 1763.0809245952391 1.2625280451514442 1.3982980838595482 0.9791391277979475 1.405287165593827 1.218182069300335 1.3384664033858817 1.1654008502046118 1.1471333241905546 1.3466434998797514 1.1493886962213675 1.0 10.783882979871981 -10.926629308083147 1.0907098554426833 0.9947451573455802 1.2564470161485366 0.19521621977057968 0.12620051498072557 0.42223005387138024 0.8621537848671218 0.08699325773495205 0.01886322265004792 1.1840517715420192e-11 10.926629308083147 0.2617018588029564 S(ph)LPSSPER ddPTM_A549_MK2206_60min_R1 1 SLPSSPER 8 0 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 1 S(0.999)LPSSPER 78.516 0.0042661999999999995 4776600.0 980.12 1226.9 1121.3 914.56 1405.9 1111.6 859.91 965.23 1394.9 1400.6 1518.6 True False 1145.5402943666516 1289.3439694863969 1280.3172008617362 1138.627241056158 1199.0939723844679 1229.2287741796383 1016.1445161446688 1102.054308392901 1078.9573771975763 1084.2034872410538 1141.4897087721681 1.0035485082023563 1.1295274583537567 1.1216195739853814 0.9974923403215881 1.0504641112132858 1.0768636499595303 0.8901915701348498 0.9654526886434347 0.9452186637391116 0.9498145089781549 1.0 10.156702137505222 -7.733640808749605 24.952293027481044 0.9669618404174364 1.0653477826207594 0.58413589001301 0.046531983185650425 134.8603170303618 121051.76501037185 0.007325968106321774 0.010864878323583573 1.846542004372858e-08 7.733640808749605 0.09838594220332297 S(ph)LPSTSSTSSTK ddPTM_A549_PD325901_60min_R1 2 SLPSTSSTSSTK 12 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 S(0.989)LPS(0.009)T(0.002)SSTSSTK;S(0.997)LPS(0.003)TSSTSSTK 92.039 0.00026817 9866000.0 6093.1 6153.0 5412.799999999999 6904.7 7712.0 6757.0 5403.6 6692.200000000001 7019.8 6569.1 7409.5 True False 6711.667026496853 6671.5349039553785 5780.145157810571 7331.187637288545 7170.335724955671 6701.973232276211 5609.236954963376 6558.718821070666 6724.782218012077 6154.325904910382 6498.178472690408 1.0328535996208266 1.026677696218029 0.8895023708724711 1.1281911797435213 1.1034377949282415 1.0313618286174013 0.86320143076049 1.0093165105628736 1.0348718869871003 0.9470847762607445 1.0 12.665819652541469 -7.553957774629794 24.998526510218078 1.0032419290735362 1.036058160045164 0.09473226565497328 0.07287486287891211 566.3410707476188 455536.3424720316 0.011133031105684674 0.01651297501870174 2.7928153665156047e-08 7.553957774629794 0.03281623097162778 S(ph)LPTTVPES(ph)PNYR ddPTM_A549_MK2206_60min_R1 2 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR 238.67 1.8806999999999999e-56 624890000.0 14006.0 17710.5 16731.6 17896.0 28644.0 22231.6 21314.2 23068.5 31730.0 30362.0 29155.0 True False 16369.870386176513 18611.888802338286 19104.39247118365 22280.520803381958 24430.505544477357 24584.13315585826 25186.71424452642 26338.53051931832 24543.20566239811 23503.203112675194 21915.008862934657 0.7469707399417592 0.8492758966580656 0.87174924685955 1.016678612485779 1.1147841964051046 1.1217943515157758 1.1492906255276616 1.201848955848029 1.1199267961013049 1.0724706186373798 1.0 14.41963164187126 -6.177353213000101 1.705686860218304 1.0848410883661654 0.7882163037008378 0.838903998304187 0.055161465447358685 0.15474608159296108 0.8419467716299349 0.010642531744292465 0.041577148183085305 6.64732307522247e-07 6.177353213000101 -0.2966247846653276 S(ph)LPTTVPES(ph)PNYR ddPTM_A549_PD325901_60min_R1 2 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 S(1)LPTTVPES(1)PNYR;S(1)LPT(0.008)T(0.002)VPES(0.99)PNYR 213.95 1.8165999999999998e-37 1025020000.0 27284.0 29303.0 28039.0 29829.0 35065.0 33298.0 31608.0 33794.0 34319.0 34781.0 37575.0 True False 30053.851594580778 31772.466648887446 29941.895152204164 31671.469583425787 32602.155367682913 33026.83212791672 32810.85973656126 33119.95215911984 32876.6917775373 32584.92172423741 32953.51320755003 0.9120075120759839 0.9641602231839732 0.9086101067167591 0.9610953886449196 0.9893377729514249 1.002224919689288 0.9956710694216334 1.0050507194945053 0.9976687939301376 0.9888148046312655 1.0 15.008144660167364 -6.6365012497277265 2.634802277956268 0.9991446091779846 0.9316990659935591 0.8161301674905893 0.01433486593378365 0.07045415503805467 0.9871360200438376 0.0017469728815007843 0.004032557392976822 2.309397813376323e-07 6.6365012497277265 -0.06744554318442553 S(ph)LPTTVPESPNYR ddPTM_A549_MK2206_60min_R1 4 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 S(0.999)LPT(0.001)TVPESPNYR;S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR 253.42 2.6007999999999995e-122 180466200.0 8059.7 10434.2 10307.1 10190.3 14348.699999999999 11466.599999999999 10518.5 10136.8 16944.1 17413.2 17314.0 True False 9419.980319253662 10965.25621192841 11768.801766701155 12686.923957459943 12238.025237607957 12679.988001086931 12429.575296330662 11573.722442648035 13106.288404167659 13479.546026007372 13014.455957909473 0.7238089974501557 0.8425443404927218 0.9042868795102206 0.9748332161168463 0.9403409007020656 0.974300273641537 0.9550591539538499 0.8892974458616659 1.007056187869488 1.0357364203007844 1.0 13.667827383705529 -4.11866314124304 0.5169527935939584 0.9922789840464374 6.3395006555522125e-15 0.816055493246887 0.03638754843178207 3.196811678677357 0.23765046100379222 0.006759948544009575 2.518024131189955 7.609162497146759e-05 4.11866314124304 -0.9922789840464311 S(ph)LPTTVPESPNYR ddPTM_A549_PD325901_60min_R1 2 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR 300.89 1.1353999999999998e-116 627200000.0 18883.1 18368.3 19710.5 20444.0 23641.2 19125.2 22933.8 22363.5 21010.8 19495.2 21556.9 True False 20800.0984109965 19916.26110455446 21048.173058865166 21706.779448307258 21980.72366971241 18969.45071213985 23806.558308856904 21917.44244867365 20127.78914302517 18264.269744928362 18905.53796044804 1.1002119302033107 1.053461750002615 1.1133337280800841 1.1481704193617577 1.1626605767949008 1.0033806365005598 1.2592372858504322 1.1593133448266197 1.0646504312722642 0.9660804036964584 1.0 14.206521281602884 -9.230236967403844 1.7395556111490738 1.0204687578743117 1.1234384835041633 0.3818647132286963 0.06515517128159068 0.26690477493731557 1.6687563273490273 0.013380420963962775 0.012124695903669309 5.885224477493101e-10 9.230236967403844 0.10296972562985163 S(ph)LPVSVPVWGFK ddPTM_A549_MK2206_60min_R1 2 SLPVSVPVWGFK 12 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK 235.21 1.0349999999999997e-98 289150000.0 19285.0 19743.0 16489.0 16145.0 40436.0 32371.0 30854.0 29424.0 45837.0 43208.0 43064.0 True False 22539.836527017975 20747.834370828878 18827.388143234803 20100.5257247766 34487.917965245295 35796.47773386926 36459.77241935506 33594.942107220784 35454.992686648024 33447.28279074074 32370.020294063394 0.6963182698761465 0.6409583368297732 0.5816304090080449 0.6209611715462223 1.0654277523443605 1.10585280480761 1.1263438233321628 1.0378412432871424 1.0953033814795108 1.0332796361229009 1.0 14.982370649580176 -6.761662277361418 24.999999351807723 1.0575364715056281 0.6315851746463576 0.9599543434170551 0.04235227600027699 0.9652200501631584 108278.71387138632 0.007369155346065955 0.014577292409588678 1.731162048315091e-07 6.761662277361418 -0.4259512968592706 S(ph)LPVSVPVWGFK ddPTM_A549_PD325901_60min_R1 1 SLPVSVPVWGFK 12 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(1)LPVSVPVWGFK 227.57 4.165899999999999e-84 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LQEEHVAVAQLR ddPTM_A549_MK2206_60min_R1 2 SLQEEHVAVAQLR 13 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR 90.714 5.6565e-05 25858000.0 621.6800000000001 418.33 667.24 585.02 851.56 568.64 590.4100000000001 707.37 1186.83 873.79 927.6400000000001 True False 726.604385383279 439.62121016810204 761.8646652126863 728.3499262625462 726.2966520547111 628.8131073673168 697.679854609173 807.641863729771 918.0148999780624 676.4002321264892 697.2813864384401 1.042053322396306 0.630478912413811 1.0926215442292577 1.0445566745769557 1.0416119893354312 0.9018068165839845 1.0005714596409467 1.1582725129879459 1.316563037294141 0.970053475228118 1.0 9.44559715992464 -8.186214422057995 4.1820722703108935 1.154425764537738 0.9576817949912605 0.17037536307427648 0.1460508750864936 0.24803799510772098 8.318630036008091 0.025737054893023702 0.03333730552851485 6.513067482184383e-09 8.186214422057995 -0.19674396954647755 S(ph)LQEEHVAVAQLR ddPTM_A549_PD325901_60min_R1 2 SLQEEHVAVAQLR 13 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR 138.17 3.1131e-09 30332000.0 1837.04 2179.12 1893.2 2453.3 2591.6 1889.69 2295.2 2210.04 2002.44 2521.38 2496.5 True False 2023.5349484426295 2362.762090022306 2021.683936736436 2604.834769151445 2409.5749565346364 1874.3009911647237 2382.5450919816317 2165.9590184571593 1918.2844104726767 2362.179636498598 2189.4463266173966 0.9242222217746286 1.0791596310436506 0.9233767972105776 1.1897230534880507 1.1005407747342815 0.8560616300014262 1.0881952496467746 0.9892724896359875 0.8761504619463982 1.0788936032736949 1.0 11.096350367806368 -8.528062851686109 24.261675567071837 0.9410521205454712 1.0253631348552499 0.0 0.10246456021607339 145.96065488993116 683092.8663428049 0.016010384613289953 0.01818774198734347 2.9644023461534304e-09 8.528062851686109 0.08431101430977872 S(ph)LQHQEQLEDSK ddPTM_A549_MK2206_60min_R1 1 SLQHQEQLEDSK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L427 I3L419 FAM64A Protein FAM64A 1 S(1)LQHQEQLEDSK 53.361999999999995 0.007032600000000001 19259000.0 971.26 1116.1 715.49 954.93 1415.6 1058.2 704.67 860.35 1651.6 1236.3 1559.7 True False 1135.1849429728534 1172.904722751461 816.9572407424992 1188.8878928684367 1207.3671152339805 1170.1780216236896 832.6994176037771 982.3072472113713 1277.5152370632431 957.0189713523596 1172.3834444698753 0.9682710450471755 1.0004446312203097 0.696834508023873 1.0140776880434579 1.0298397857195296 0.9981188553484027 0.7102620064549824 0.8378719879105321 1.0896735561127837 0.8163020177968322 1.0 10.195228785275866 -8.767154711221357 24.994649401356337 1.0423458482561334 0.9072246321433545 0.0 0.131469818057833 154.5613348597882 675935.695227407 0.020023008161564437 0.021601264684180044 1.7094062549894906e-09 8.767154711221357 -0.13512121611277894 S(ph)LQHQEQLEDSK ddPTM_A549_PD325901_60min_R1 2 SLQHQEQLEDSK 12 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L427 I3L419 FAM64A Protein FAM64A 1 S(1)LQHQEQLEDSK;S(1)LQHQEQLEDSK 127.49 2.8777e-08 42789000.0 5545.8 6066.2 6284.5 6679.200000000001 7432.4 6183.7 6702.1 6448.3 7689.5 8129.9 8595.8 True False 6108.80553339782 6577.419963330755 6711.003961768503 7091.759014436204 6910.373864388035 6133.341997399201 6957.1520830298405 6319.683597906506 7366.337055956554 7616.576726542587 7538.5710932656975 0.8103399779375822 0.8725022132120568 0.8902222820135675 0.9407298713109389 0.9166689255688204 0.8135947676978459 0.9228741092917137 0.838313192211182 0.9771529597349022 1.0103475356684735 1.0 12.880075376853698 -8.84475470533232 6.445724106714842 0.98985261624803 0.8792047555768459 0.6280129612791336 0.04110718103396597 0.10101982575351157 6.343846901207401 0.006967167694210147 0.007400840584678478 1.4297012427047661e-09 8.84475470533232 -0.11064786067118415 S(ph)LQLMDNR ddPTM_A549_MK2206_60min_R1 7 SLQLMDNR 8 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR 117.09 0.0012711999999999999 218425600.0 10084.189999999999 9874.67 9208.859999999999 8250.17 12202.49 9125.17 7393.0599999999995 7999.9 11406.4 12188.48 13949.449999999997 True False 11786.15473722528 10377.248524874272 10514.81482059003 10271.462020364203 10407.519885540754 10090.789432602383 8736.283304681307 9133.910323666241 8822.868612277898 9435.093902733002 10485.416579765524 1.1240521201579998 0.9896839525574986 1.0028037265473304 0.9795950348969248 0.9925709490288547 0.9623641899049884 0.8331841885557845 0.8711060980917645 0.8414418774075255 0.899830143223932 1.0 13.356096559593688 -4.9540632445187525 0.5650828889203396 0.9168451610964897 1.2903591940628572 0.5811649552101382 0.053071403529839814 3.707947593406642 0.6240072044028591 0.012640797583357925 0.9784258826758983 1.111569842151327e-05 4.9540632445187525 0.3735140329663674 S(ph)LQLMDNR ddPTM_A549_PD325901_60min_R1 5 SLQLMDNR 8 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR 140.78 0.0010695 235214900.0 17170.010000000002 16539.84 20150.8 17021.43 20193.690000000002 18323.690000000002 18196.29 20478.489999999998 19461.42 20030.52 19716.53 True False 18913.0967753067 17933.710363373524 21518.35446460414 18072.805072627678 18775.354878848575 18174.467943840067 18888.759773341946 20070.030451885374 18643.52419631108 18765.789548770063 17291.52180338141 1.0937786153447864 1.0371389266540167 1.2444453824993102 1.0451830254230998 1.0858127521880114 1.0510623732542728 1.0923711624761792 1.1606861836741644 1.0781887452303522 1.085259571838284 1.0 14.077777223751005 -10.127075746719216 0.7368172264911861 1.0022800136369212 1.0998793311088313 0.05208895478455566 0.06118662542875398 0.593470706118786 0.629493755351053 0.029695620682538202 0.01132923464739807 7.463185791966512e-11 10.127075746719216 0.09759931747191009 S(ph)LQLPASPAPDPSPR ddPTM_A549_MK2206_60min_R1 2 SLQLPASPAPDPSPR 15 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR 185.02 2.5445e-33 37626000.0 7761.099999999999 8588.5 7137.200000000001 7445.0 9647.900000000001 7051.3 6756.6 7808.1 11497.5 9906.8 10591.7 True False 9070.983939322748 9025.617965550515 8149.362281272079 9269.02533421875 8228.706690495846 7797.463885725876 7984.186761152997 8914.922086303382 8893.3346077347 7668.846999428589 7961.4885739511255 1.1393577790215936 1.1336596016831666 1.0235978115871007 1.1642326994659895 1.0335638384785253 0.979397736151765 1.0028509978995808 1.1197556843165934 1.117044196588116 0.9632428569350687 1.0 12.958822483958441 -10.98019657401798 1.2621021566084092 1.000163859497828 1.080447201739707 0.2689531076024434 0.05998174581529786 0.6281708312133181 1.786043342288832 0.04298498224519188 0.009975803006541002 1.0466546951756937e-11 10.98019657401798 0.08028334224187916 S(ph)LQLPASPAPDPSPR ddPTM_A549_PD325901_60min_R1 2 SLQLPASPAPDPSPR 15 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR 189.81 1.2362e-33 69915000.0 19836.6 23235.9 18959.6 20514.5 24861.3 19801.0 20209.1 20026.9 19706.1 23653.4 20716.7 True False 21850.39702906691 25194.07083939814 20246.312469336644 21781.634073190122 23115.128054828907 19639.747221000616 20978.168359343857 19627.447768700877 18877.92114680869 22159.920287285517 18168.677233981405 1.2026410479789622 1.3866761192871508 1.1143525865201336 1.1988563500072145 1.2722515655457851 1.0809673686242731 1.1546337737844656 1.080290409474119 1.0390366290123072 1.2196771400528363 1.0 14.14916576789187 -7.65619663999781 0.4488340055077752 1.000728466501018 1.2784037619128832 0.22383406687470642 0.09421753301691395 0.4486915381177968 0.18511086764751558 0.02003067760348991 0.047795678189492284 2.2070052182098427e-08 7.65619663999781 0.2776752954118651 S(ph)LQLPASPAPDPSPRPAYK ddPTM_A549_MK2206_60min_R1 2 SLQLPASPAPDPSPRPAYK 19 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)LQLPASPAPDPSPRPAYK;S(1)LQLPASPAPDPSPRPAYK 114.88 1.8928999999999998e-14 24331000.0 3030.1000000000004 3979.4 3763.3 3303.2 4735.4 3263.6000000000004 3549.2 3159.9 5454.6 5249.2 5557.4 True False 3541.5068011676035 4181.93446260834 4296.992528317999 4112.484148286283 4038.8289329464487 3608.95198579765 4194.043698411065 3607.825501787894 4219.141809206326 4063.4020742722682 4177.3442035627895 0.8477890804753675 1.0010988462577817 1.0286421991879826 0.9844733753993294 0.9668413078103061 0.8639345502627322 1.003997634390298 0.8636648851466053 1.0100057844426342 0.9727237872346401 1.0 12.028370307816605 S(ph)LQLPASPAPDPSPRPAYK ddPTM_A549_PD325901_60min_R1 2 SLQLPASPAPDPSPRPAYK 19 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)LQLPASPAPDPSPRPAYK;S(1)LQLPASPAPDPSPRPAYK 134.81 2.6726e-17 41770000.0 5135.1 5123.2 4813.1 5535.4 6536.6 6737.9 5924.700000000001 6562.1 6676.8 6963.6 7286.3 True False 5656.411571739181 5554.950043871965 5139.745909521517 5877.309086194479 6077.491766045806 6683.028776343628 6150.16770062024 6431.213767632137 6396.197315197446 6523.91710758459 6390.131291661261 0.8851792417974981 0.8693013946553559 0.8043255568517941 0.9197477826260028 0.9510746319056964 1.0458359102988355 0.9624477839204715 1.006429050374049 1.000949279953622 1.0209363172393517 1.0 12.64162985775654 -6.710015670598859 2.2479830875809115 1.000330723191981 0.8554293723733816 0.8318233226528184 0.02912397538176475 0.0766733217982184 0.7881898632359307 0.0037640128576611727 0.00868768042300101 1.9497742450043465e-07 6.710015670598859 -0.14490135081859934 S(ph)LQNQRPLSESGPDNELSILGK ddPTM_A549_MK2206_60min_R1 1 SLQNQRPLSESGPDNELSILGK 22 1 Q8IUD6-2;Q8IUD6-3;Q8IUD6 Q8IUD6-2 RNF135 E3 ubiquitin-protein ligase RNF135 1 S(0.528)LQNQRPLS(0.441)ES(0.03)GPDNELSILGK 56.303000000000004 0.0014203 1999600.0 901.9 1255.7 1019.1 1007.7 1432.8 1272.6 1116.2 1073.5 1518.6 1788.6 1524.3 True False 1054.1186706620442 1319.6097664716524 1163.6237040918534 1254.5865452373719 1222.0370180186824 1407.2656873164872 1318.9990916731745 1225.6719124558697 1174.6395247058852 1384.5540177633518 1145.774241460171 0.9200055582665908 1.1517188279516093 1.015578516243248 1.0949683627365638 1.0665600375701607 1.2282224860659046 1.1511858479138493 1.0697324726849133 1.0251928191446584 1.2084003703896158 1.0 10.162107094192251 -8.738005762113856 3.046635178015838 1.0108480868789782 1.0946966823976023 0.0 0.09589113854805405 0.29428662969000496 5.486588745051956 0.012931273889006748 0.014177205392039777 1.8280759615133494e-09 8.738005762113856 0.08384859551862411 S(ph)LQQLAEER ddPTM_A549_MK2206_60min_R1 1 SLQQLAEER 9 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 S(1)LQQLAEER 97.69 0.00085575 17101000.0 3375.2 3394.0 2799.1 2680.4 4569.9 3414.8 3382.0 3899.9 4665.9 4400.0 4651.2 True False 3944.851244282662 3566.7401030539013 3196.05446975126 3337.0981203277297 3897.673763709923 3776.1518694392134 3996.4656226829225 4452.722767942851 3609.08109991123 3406.0369440672835 3496.1786734104508 1.1283322772616025 1.0201824438150409 0.9141565029437052 0.9544987347778936 1.114838264232023 1.080079773427499 1.1430953609657633 1.2735970280372744 1.0322930939884274 0.9742170701890256 1.0 11.77156320080962 -5.252354223385062 21.879975332484133 1.0400450886968637 1.1283325567050488 0.040888980301493794 0.09625738990425989 504.67406839677443 1215251.7662353946 0.013713686365071552 0.20830068844092192 5.593012328294694e-06 5.252354223385062 0.0882874680081851 S(ph)LQQLAEER ddPTM_A549_PD325901_60min_R1 1 SLQQLAEER 9 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 S(1)LQQLAEER 79.639 0.0017369 25218000.0 3729.2 3920.9 4182.9 3739.5 5459.9 4173.7 4216.6 4794.1 4878.5 4648.8 5461.2 True False 4107.785638708057 4251.328003399745 4466.776747821063 3970.4804219793073 5076.415459632454 4139.710770985824 4377.065020412053 4698.477914601305 4673.473610440742 4355.273974630828 4789.507021399128 0.8576635591836081 0.8876337344125727 0.9326172250847253 0.8289956365528903 1.0599035426718122 0.8643291997464317 0.913886335452831 0.9809940550476047 0.9757734124952824 0.9093365883319136 1.0 12.225661453278258 -2.000000000005421 0.13112623309266253 1.0271603278188777 0.4732014275767961 0.1356062891363098 0.0618452548738938 53.48588265510735 0.45491045240248734 0.13778459323960057 5.526174272502676 0.009999999999875176 2.000000000005421 -0.5539589002420815 S(ph)LQSVAEER ddPTM_A549_PD325901_60min_R1 1 SLQSVAEER 9 0 E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;P61313;P61313-2 E7EX53 RPL15 Ribosomal protein L15;60S ribosomal protein L15 1 S(1)LQSVAEER 66.498 0.0053411000000000005 2859000.0 532.71 587.88 647.17 795.56 698.46 599.38 490.05 679.36 747.33 622.26 630.65 True False 586.7903270396254 637.4227107650393 691.0908479493547 844.699934352148 649.4025791561907 594.4988480038058 508.6991209156496 665.8096318523899 715.9223190100802 582.970397404444 553.0840480197319 1.0609424175956184 1.1524879682342575 1.249522293083201 1.5272541983022667 1.174148091020377 1.0748797585689842 0.9197501224940431 1.2038127554686524 1.2944186721229372 1.0540358187724226 1.0 9.111354922400425 -6.991299870637526 24.9711617729288 1.125349081289403 1.2546270414441152 0.18894397350933534 0.1422721085553453 339.534769670123 974526.5474759995 0.023751643765537917 0.04483993826945857 1.0202347911174203e-07 6.991299870637526 0.12927796015471227 S(ph)LRLS(ph)AQK ddPTM_A549_MK2206_60min_R1 2 SLRLSAQK 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 2 S(1)LRLS(1)AQK;S(1)LRLS(1)AQK 69.45100000000001 0.0020551 16152800.0 1913.27 1718.22 2080.23 1746.6100000000001 3069.5 2827.3 2376.6 2563.0 3637.6000000000004 2224.74 2787.5 True False 2236.1832010395474 1805.6700588890026 2375.23789418408 2174.5295284083018 2617.9806161420634 3126.48300939015 2808.3974567913156 2926.31309885831 2813.6894080535553 1722.169688850965 2095.2868189137507 1.067244436825523 0.8617770333825262 1.1336099061681029 1.0378195046039722 1.2494616930293534 1.4921503734801316 1.3403403445487523 1.3966169559427593 1.3428659898277042 0.8219255107726879 1.0 11.032932029255775 -6.731868716323796 6.730952292478894 1.2276657560938002 1.0198600147765247 0.22600421190131093 0.1863091795051228 0.2221401903059968 32.23430368122014 0.026693875636801905 0.055024440525653626 1.8540920155886522e-07 6.731868716323796 -0.20780574131727558 S(ph)LRLS(ph)AQK ddPTM_A549_PD325901_60min_R1 2 SLRLSAQK 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 2 S(1)LRLS(1)AQK;S(1)LRLS(1)AQK 88.441 0.0007815000000000001 28025000.0 3256.8999999999996 3134.1000000000004 3631.4 2836.2 3562.3 3159.2 2713.3 3367.7 3390.0 3136.8 3050.3999999999996 True False 3587.5380903969394 3398.221606124908 3877.8486413821515 3011.3856325224538 3312.0963372678416 3133.4725226294213 2816.5561162747326 3300.5285815904585 3247.530089042554 2938.741912670363 2675.220138078793 1.3410253755690278 1.2702586818015424 1.449543753871046 1.1256590026587785 1.2380649689809904 1.1712952059637687 1.0528315319491577 1.2337409301803217 1.2139300399311308 1.0985047065251303 1.0 11.385441897315028 -13.247477441781681 0.03926906632286174 2.384485026873089e-10 1.9457895636022242 0.5020534621970092 0.08725491119812122 241.44012253679574 1.014122851578894 37.696186147290035 16.43425148036035 5.656171357342818e-14 13.247477441781681 1.9457895633637756 S(ph)LRQS(ph)FR ddPTM_A549_MK2206_60min_R1 2 SLRQSFR 7 1 J3QRV5;Q6P1M3;Q6P1M3-2;A0A087WW77;Q15334 J3QRV5;A0A087WW77 LLGL2;LLGL1 Lethal(2) giant larvae protein homolog 2;Lethal(2) giant larvae protein homolog 1 2 S(1)LRQS(1)FR;S(1)LRQS(1)FR 50.353 0.015247 14380600.0 1433.01 1384.76 1128.4 777.31 1724.52 1105.69 885.64 1059.84 1536.06 1387.77 1289.75 True False 1674.8670542692278 1455.238369211821 1288.4240876236365 967.7509848947718 1470.8453924578296 1222.6933819023798 1046.5493240901542 1210.0755656238746 1188.144862583776 1074.2717931518757 969.4694797108552 1.7276119458332588 1.5010667170727712 1.3289991222909974 0.998227386367443 1.5171652364925505 1.2611984260371443 1.079507241839411 1.2481832496519438 1.2255619051959643 1.1081027465374957 1.0 9.92105167071342 -2.0000000000000004 0.2761366549755965 1.0871650227757714 5.3529385189457805 0.5941454053751443 0.1410337994464362 24.027782829308457 0.29818580013434204 0.05673674769859995 50.05701611412106 0.00999999999999999 2.0000000000000004 4.265773496170009 S(ph)LRQS(ph)FR ddPTM_A549_PD325901_60min_R1 2 SLRQSFR 7 1 J3QRV5;Q6P1M3;Q6P1M3-2;A0A087WW77;Q15334 J3QRV5;A0A087WW77 LLGL2;LLGL1 Lethal(2) giant larvae protein homolog 2;Lethal(2) giant larvae protein homolog 1 2 S(1)LRQS(1)FR;S(1)LRQS(1)FR 68.657 0.006578399999999999 18332800.0 1850.19 1702.98 2018.6 2399.96 2076.86 1775.62 2268.9 2231.75 2051.01 2622.9 2481.2 True False 2038.0199267621117 1846.4961012088293 2155.594334827893 2548.2000784953766 1930.9885183780405 1761.159939424934 2355.24423108972 2187.2359954759936 1964.813182279402 2457.289646373086 2176.028129622705 0.9365779325267629 0.8485626063708045 0.9906095906957072 1.1710326919979668 0.8873913402548013 0.8093461272167912 1.0823592760715317 1.0051506070628011 0.902935562060071 1.1292545408404937 1.0 11.087481491160666 S(ph)LS(ph)PGVSR ddPTM_A549_PD325901_60min_R1 2 SLSPGVSR 8 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 S(1)LS(0.964)PGVS(0.036)R;S(1)LS(0.997)PGVS(0.003)R 56.548 0.021366999999999997 8399400.0 1623.47 1483.4099999999999 1499.44 1823.6 1761.77 1996.3899999999999 1455.92 1559.35 2008.6599999999999 1581.9 2070.97 True False 1788.2834792645522 1608.4221667278482 1601.2010152652033 1936.2396303039081 1638.0293529765513 1980.132061740996 1511.3258323099935 1528.2475409635892 1924.2430055033105 1482.0185640312575 1816.2538189604768 0.9845999829958054 0.8855712510757004 0.8815954017823578 1.066062248619031 0.9018724893385599 1.0902287120168668 0.8321115785320098 0.8414283978426945 1.0594571008828715 0.8159754702564 1.0 10.826750116017546 -8.791807620072815 24.99986369971559 1.028076972283965 0.9369283283281055 0.0 0.1027991246943791 226.98064994129996 186854.94702811938 0.0137545975209335 0.01464373836238078 1.615073829507883e-09 8.791807620072815 -0.09114864395585964 S(ph)LS(ph)PKPR ddPTM_A549_PD325901_60min_R1 2 SLSPKPR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)LS(1)PKPR;S(1)LS(1)PKPR 56.431999999999995 0.010948000000000001 69411000.0 6965.299999999999 7583.2 7766.3 6693.6 7877.4 7082.1 6593.8 7350.8 8056.4 8696.3 8493.099999999999 True False 7672.412128417153 8222.262877242718 8293.367820555768 7107.048469731433 7324.118599554699 7024.425725662774 6844.730667265813 7204.182527408956 7717.817524885674 8147.21413388016 7448.502542196754 1.0300610203127303 1.1038813279128938 1.1134275344034241 0.9541580243101297 0.9833008122186435 0.9430654934825452 0.9189405022673359 0.9671987740618074 1.0361569296866338 1.0938056458630594 1.0 12.862734697875196 -6.256400283181037 24.987199016458494 0.9957735916007284 1.0845990993969608 0.4175672194493808 0.0493794786004768 313.44347150121206 1554251.8875357662 0.00656168679435984 0.016807476410782295 5.541147576619086e-07 6.256400283181037 0.08882550779623233 S(ph)LS(ph)PSHLTEDR ddPTM_A549_PD325901_60min_R1 1 SLSPSHLTEDR 11 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.997)LS(0.54)PS(0.37)HLT(0.094)EDR 47.711999999999996 0.034083999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LS(ph)SSPVKK ddPTM_A549_MK2206_60min_R1 1 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(0.979)LS(0.502)S(0.283)S(0.237)PVKK 45.433 0.011677 41840000.0 10498.0 11206.0 10263.0 9471.4 15086.0 13053.0 10401.0 11648.0 17189.0 16839.0 14593.0 True False 12269.805748542114 11776.337535304072 11718.447723574422 11791.893425187302 12866.86938430335 14434.25979611984 12290.727067275297 13299.139670503933 13295.718945192591 13035.058204806588 10969.155353689088 1.1185734318564098 1.0735865393084725 1.0683090307070302 1.0750046876874175 1.1730045723143152 1.315895283702531 1.120480718065657 1.2124123728479457 1.2121005233753979 1.1883374594036273 1.0 13.421164819241433 -6.734231302733103 24.05057761547919 1.1333072506619737 1.0820225778186001 0.11399634812230708 0.07976578536114758 397.3075713841163 351196.437091089 0.014867493938793828 0.030941972787267465 1.8440330362507516e-07 6.734231302733103 -0.05128467284337357 S(ph)LS(ph)SSPVKK ddPTM_A549_PD325901_60min_R1 1 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(1)LS(0.846)S(0.122)S(0.032)PVKK 79.492 0.00043374 125050000.0 13947.0 13568.0 15188.0 14131.0 16334.0 13649.0 13808.0 14888.0 14411.0 15252.0 16891.0 True False 15362.889172761255 14711.422976900138 16218.749012863396 15003.839776170498 15186.75618924093 13537.847069311532 14333.470996027527 14591.047160589937 13805.35578560243 14288.986117077393 14813.514080871002 1.0370860748429485 0.9931082453890737 1.0948616867220589 1.0128481124910982 1.025196054516997 0.9138849158548568 0.9675942465627811 0.9849821643219456 0.9319433397258232 0.9645912535722403 1.0 13.854626298749631 -7.105597760859203 7.857036637550695 0.9651645809074002 1.0337823465280402 0.557992774067825 0.03188566480461992 0.1957299889403378 13.058932713647728 0.005182513114138335 0.00900384607838254 7.841555834766398e-08 7.105597760859203 0.06861776562064004 S(ph)LSAPLHPEFEEVYR ddPTM_A549_MK2206_60min_R1 1 SLSAPLHPEFEEVYR 15 0 Q53HC0-2;Q53HC0 Q53HC0-2 CCDC92 Coiled-coil domain-containing protein 92 1 S(0.546)LS(0.454)APLHPEFEEVYR 85.63600000000001 3.2316e-05 2987200.0 421.31 275.24 444.05 346.92 462.13 563.31 235.61 483.16 344.98 499.42 517.57 True False 492.41682795944735 289.2485403549077 507.0229671298086 431.91541557383056 394.1512891799094 622.9190903050848 278.4172872147613 551.6494096154432 266.8425808198581 386.6006751377464 389.04308479468676 1.2657128405696119 0.743487165457665 1.3032565979096749 1.110199441796451 1.0131301765405196 1.601157081699122 0.7156464106326244 1.417964824915395 0.6858946765772262 0.9937220072727181 1.0 8.603786125905554 -8.777104132928798 24.97274447466893 0.8516725018500261 1.133284727659438 0.14961200387218443 0.26239640561395833 268.9397257741957 428742.0607838084 0.04296221316954784 0.045811963433030116 1.670689976709751e-09 8.777104132928798 0.2816122258094119 S(ph)LSDIK ddPTM_A549_PD325901_60min_R1 1 SLSDIK 6 0 O14545;F8VNX8 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 S(0.998)LS(0.002)DIK 63.419 0.059947 18420000.0 2123.0 1952.3 1750.0 1946.9 2239.3 2187.6 1888.0 2261.8 2227.1 2165.5 2408.6 True False 2338.5253971300035 2116.827172597446 1868.765523604881 2067.155591269291 2082.019293165618 2169.784910896469 1959.8488731532411 2216.686624652226 2133.502731948871 2028.7699604334575 2112.3574693733863 1.1070689649056928 1.0021159786110376 0.8846824226958305 0.9786012174740936 0.9856377641343215 1.027186421974363 0.9278017104437415 1.049389914723945 1.0100102671456253 0.9604292785895162 1.0 11.044638283966787 -8.292407391529228 24.960656745964883 1.0082088573200831 0.9852887061344213 0.01964219434081438 0.05591359561604706 1972.7870174717605 1590087.5867141066 0.008670514454717946 0.01048244486767276 5.100263434284648e-09 8.292407391529228 -0.02292015118566182 S(ph)LSDSESDDSK ddPTM_A549_MK2206_60min_R1 2 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.997)LS(0.003)DSESDDSK;S(0.952)LS(0.046)DS(0.001)ESDDSK 150.51 9.0674e-12 247190000.0 4266.4 4635.5 4094.2999999999997 3820.6000000000004 6056.6 3682.3 4515.0 4668.7 5003.6 5182.8 5162.4 True False 4986.464016534586 4871.427150178658 4674.933305527695 4756.647171513254 5165.682163129508 4071.958541887084 5335.317056893376 5330.502522294101 3870.292589107317 4012.0018803890725 3880.433605008193 1.2850275314848632 1.2553821675730934 1.2047450829964206 1.2258030044307924 1.331212614090997 1.0493565813448538 1.3749280621648752 1.3736873413874187 0.9973866281624333 1.0339055602474616 1.0 11.9220021548176 -8.777875943625663 24.994503504595897 0.9987658667743116 1.2580618150048861 0.6280072101633144 0.08623002114256409 98.45214002216336 149712.1404175594 0.014268791884912662 0.01521142745490352 1.667723530341537e-09 8.777875943625663 0.25929594823057456 S(ph)LSDSESDDSK ddPTM_A549_PD325901_60min_R1 2 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.981)LS(0.019)DSESDDSK;S(0.986)LS(0.014)DSESDDSK 269.04 2.6930999999999993e-76 273920000.0 5686.9 6076.5 6547.3 6036.6 6583.2 6427.2 5571.799999999999 5974.5 6517.400000000001 7731.8 7083.3 True False 6264.229901525491 6588.587980478601 6991.639150113285 6409.467071886691 6120.818742807078 6374.859014131365 5783.837898005949 5855.3339105954165 6243.496342869014 7243.612828482756 6212.099004738232 1.00839183289698 1.0606057590925715 1.1254873988293594 1.0317715585340668 0.9853060516483187 1.026200485418695 0.9310601607595709 0.9425693161247598 1.0050542237183977 1.166049160349464 1.0 12.600865107385799 -6.5504113647875535 5.298046304015888 0.9934852160137655 1.0667424587491945 0.10616594940687174 0.0636107850030372 0.1272659459185272 9.751190999078212 0.005326187728095074 0.011515431314576543 2.8157146160268793e-07 6.5504113647875535 0.073257242735429 S(ph)LSEEKEDHSDGLAGLK ddPTM_A549_MK2206_60min_R1 2 SLSEEKEDHSDGLAGLK 17 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.543)LS(0.456)EEKEDHSDGLAGLK;S(0.5)LS(0.5)EEKEDHSDGLAGLK 128.01 2.447e-12 21503000.0 2533.4 3461.2 2263.1 2137.48 3370.5 2952.3 2276.92 2813.2 3497.6000000000004 3560.8999999999996 4073.7 True False 2960.9759843166885 3637.3602960194967 2584.041609979663 2661.162695955123 2874.703914874353 3264.7104264218665 2690.6068910701347 3211.9797150636728 2705.399184519495 2756.4902168475446 3062.087861599621 0.9669794330362185 1.1878693428866394 0.8438822551060867 0.8690680399238915 0.9388051698074464 1.0661713752120738 0.878683765025793 1.048950866284336 0.8835145517693298 0.9001995832371598 1.0 11.580299963866702 -5.764127359810215 24.999999570284206 0.9440270962471926 1.077424370253769 0.28806808375750126 0.08473751638758668 60.8504841048856 565978.2631879839 0.01116829848552238 0.037150189050445856 1.7213636993496415e-06 5.764127359810215 0.1333972740065763 S(ph)LSEEKEDHSDGLAGLK ddPTM_A549_PD325901_60min_R1 1 SLSEEKEDHSDGLAGLK 17 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.549)LS(0.45)EEKEDHS(0.001)DGLAGLK 119.87 4.0654e-10 20010000.0 1932.0 1799.4 1959.1 1543.9 2544.1 1743.3 2249.0 1827.8 2005.2 2219.8 2444.2 True False 2128.1352177367726 1951.04175299485 2092.056307025329 1639.2631965486962 2365.4111926685323 1729.1031427892724 2334.586925700021 1791.3430951186392 1920.9284172708358 2079.6414491665623 2143.5788950603796 0.9927953772267514 0.9101795868072743 0.9759642212592322 0.7647319164814421 1.1034868826705369 0.8066431082960291 1.0891070681278847 0.8356786397023102 0.896131428471042 0.9701725716552101 1.0 11.065805801615301 -10.946301773899696 1.249400136913 0.9994060051463722 0.9266682686308552 0.0373470544081147 0.10237062400856388 1.0017906463154378 2.816429392262034 0.06078685718418003 0.014706713734555447 1.1316137767407158e-11 10.946301773899696 -0.07273773651551707 S(ph)LSEINKPNFYNNDFDDDFSHR ddPTM_A549_MK2206_60min_R1 1 SLSEINKPNFYNNDFDDDFSHR 22 1 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 S(0.498)LS(0.498)EINKPNFY(0.004)NNDFDDDFSHR 47.391999999999996 0.0058379 1400200.0 557.69 508.51 584.4 291.5 751.6 590.61 476.81 475.24 699.41 588.95 685.49 True False 651.8144377885743 534.390986978179 667.2767075569417 362.9175130859324 641.0406356384995 653.1079581848117 563.4402050713906 542.6067253614605 540.9947517282653 455.90578595646076 515.2639144384524 1.2650108410928371 1.0371209238678625 1.295019287900564 0.7043332609104774 1.2441015519922867 1.267521244713178 1.0934982817212067 1.0530656429779426 1.0499372002750378 0.8848005326616329 1.0 9.009167749306945 -8.352967629629134 2.5048334185931957 1.0240570724718225 1.126345391257874 0.12980289620544827 0.16201704625090121 0.5730899205335773 7.036834101660135 0.025333495994457732 0.031392762160188305 4.436417097706081e-09 8.352967629629134 0.10228831878605149 S(ph)LSELESLKLPAESNEK ddPTM_A549_MK2206_60min_R1 1 SLSELESLKLPAESNEK 17 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 S(0.699)LS(0.263)ELES(0.038)LKLPAESNEK 48.354 0.0063058 1830100.0 973.3 982.41 864.14 882.47 1327.9 1016.4 844.03 857.04 1611.8 1229.9 1475.3 True False 1137.5692450996428 1032.4104727876208 986.6880459757965 1098.6751896155836 1132.567669058494 1123.9547733682843 997.3793256987182 978.5280445749221 1246.7298735157033 952.0647357973528 1108.942293791374 1.0258146447011196 0.9309866514856263 0.8897559877551418 0.9907415343131264 1.0213044226010597 1.0135376562522331 0.8993969580588076 0.8823976234411827 1.1242513523884512 0.8585340654132048 1.0 10.11496857836091 -8.764500686953252 24.999918927387796 1.0586742467512114 0.956917656403808 0.0 0.08261985776576115 68.31380196220775 557877.0240616805 0.011514676083208091 0.012515524714607595 1.719884620777088e-09 8.764500686953252 -0.10175659034740336 S(ph)LSELESLKLPAESNEK ddPTM_A549_PD325901_60min_R1 2 SLSELESLKLPAESNEK 17 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 S(0.994)LS(0.006)ELESLKLPAESNEK;S(0.925)LS(0.073)ELES(0.002)LKLPAESNEK 107.47 2.5958999999999997e-09 5270900.0 3326.1000000000004 4231.6 3648.0 3547.0 4082.7 3935.0 3954.7 3907.9 4300.3 3681.5 4194.299999999999 True False 3663.7632234545936 4588.2117828014925 3895.575217206061 3766.090134178525 3795.9452365503803 3902.9546646450917 4105.198272594876 3829.9538688117586 4119.573345696076 3449.04946171128 3678.427689858338 0.9960133873382436 1.2473296119022506 1.0590327024631783 1.0238314985943255 1.031947765893576 1.0610388442338528 1.1160198374738128 1.0411931922356903 1.1199277770374567 0.9376423169117967 1.0 11.844873515952324 -10.983931755419272 1.2326741782836013 0.9996165319839724 1.0826692809427372 0.24724126073466746 0.06765026877751076 0.6416193681420469 1.7212318463967897 0.04514882972025096 0.010166177497586486 1.0376914647586255e-11 10.983931755419272 0.0830527489587648 S(ph)LSESYELSSDLQDK ddPTM_A549_PD325901_60min_R1 1 SLSESYELSSDLQDK 15 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A2R8Y695 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 S(0.464)LS(0.464)ES(0.073)YELSSDLQDK 79.013 9.307e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LSFEMQQDELIEKPMSPMQYAR ddPTM_A549_PD325901_60min_R1 1 SLSFEMQQDELIEKPMSPMQYAR 23 1 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 S(0.521)LS(0.479)FEMQQDELIEKPMSPMQYAR 51.22 0.0020299 3873500.0 1308.8 1721.8 1581.9 1662.1 1806.3 2004.8 1806.8 2205.2 2088.7 1840.8 1924.4 True False 1441.668412512363 1866.902128657626 1689.2572467374648 1764.7641420970208 1679.431719396711 1988.4735734893218 1875.5587627188975 2161.2155560540673 2000.9192026499077 1724.5715738471072 1687.7109997766945 0.85421521380326 1.1061740599573273 1.0009161799389676 1.0456554127635131 0.9950943731592204 1.1782073908106434 1.1113032758375443 1.2805602122282922 1.1855816564060164 1.0218405722752828 1.0 10.720852165671134 -7.242135520622211 24.032089872838412 1.1133863747021917 1.008828398527718 0.3176897000445623 0.09224046395736145 663.9314948276846 826551.9412843437 0.015252387368333698 0.026385845534430966 5.7261731914961195e-08 7.242135520622211 -0.10455797617447371 S(ph)LSFSEPQQPAPAMK ddPTM_A549_MK2206_60min_R1 1 SLSFSEPQQPAPAMK 15 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 S(0.521)LS(0.421)FS(0.058)EPQQPAPAMK 89.01299999999999 7.5828e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LSGSS(ph)PCPK ddPTM_A549_MK2206_60min_R1 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)LSGS(0.357)S(0.643)PCPK 140.16 1.1404999999999999e-07 12651000.0 7406.3 8839.0 8744.3 8668.2 11787.0 9583.6 9015.3 10360.0 12652.0 14388.0 14220.0 True False 8656.302373349927 9288.867345578508 9984.373227053671 10791.90938913028 10053.147914144482 10597.73019092118 10653.263314066624 11828.561726169366 9786.34220109237 11137.740807100015 10688.781547965391 0.8098493111216829 0.8690295805836394 0.9340983518326461 1.0096482317186584 0.940532638732625 0.9914815962291285 0.9966770549347107 1.1066333120467722 0.9155713546185439 1.0420028472955445 1.0 13.383809784067523 -5.681057549487968 1.922133714745643 0.976037592101617 0.8091979388534967 0.5733282222794128 0.05142986768007226 0.24961398046210242 1.5912767746988945 0.007481921173772301 0.05500036980747722 2.0842146801056582e-06 5.681057549487968 -0.16683965324812033 S(ph)LSGSSPCPK ddPTM_A549_MK2206_60min_R1 2 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.98)LS(0.019)GS(0.001)SPCPK;S(0.999)LS(0.001)GSSPCPK 121.29 4.4878999999999995e-05 36358000.0 17873.3 19789.2 17406.0 15948.8 25276.0 18577.3 16346.4 19119.3 28070.7 26764.9 27995.8 True False 20889.876079769278 20796.38575349273 19874.43253206045 19856.25671596883 21557.933882914735 20543.137555386293 19316.329288771183 21829.51932540057 21712.731269696775 20718.690500969646 21043.670215227117 0.9926916676661016 0.9882489860748981 0.9444375590755737 0.9435738401565008 1.0244379265797228 0.9762145740395304 0.9179163658815545 1.0373437286431535 1.0317939336449744 0.9845568899847937 1.0 14.361098725792361 -8.291789061527627 24.99810583617616 1.0171080499556389 0.970749049566319 0.32725025417447773 0.029999389977467532 556.139043214854 458073.18239400606 0.0048304060032867925 0.005839975234011582 5.107530144105358e-09 8.291789061527627 -0.04635900038931984 S(ph)LSGSSPCPK ddPTM_A549_PD325901_60min_R1 2 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.995)LS(0.004)GSSPCPK;S(0.966)LS(0.022)GS(0.006)S(0.006)PCPK 95.618 0.00055351 49141000.0 18454.4 17158.0 16846.5 17556.3 18807.8 17946.3 18202.8 20528.6 17300.0 22298.3 24115.2 True False 20327.87710258876 18603.96487600624 17989.80479623407 18640.712777749774 17486.805011387627 17800.15128287681 18895.517514954365 20119.14096862485 16572.94116237056 20890.38153254832 21149.18327884791 0.9611660570798226 0.879654057119679 0.850614634099197 0.8813916136607056 0.826831219949606 0.8416472186270856 0.8934395842061891 0.9512963552000023 0.7836208587281844 0.9877630382749376 1.0 14.368314331201695 -11.065503898009174 1.3774439525286137 1.00000680994792 0.8634357766282481 0.4499151194890293 0.04973067622778185 0.306806169312964 1.0386633496406348 0.03856839950366041 0.00853504810823835 8.59995347967847e-12 11.065503898009174 -0.1365710333196719 S(ph)LSKSDSDLLTCSPTEDATMGSR ddPTM_A549_MK2206_60min_R1 4 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.269)LS(0.243)KS(0.221)DS(0.267)DLLT(0.001)CSPTEDATMGSR;S(0.341)LS(0.318)KS(0.318)DS(0.019)DLLT(0.004)CSPTEDATMGSR;S(0.356)LS(0.326)KS(0.299)DS(0.019)DLLTCSPTEDATMGSR;S(0.339)LS(0.306)KS(0.339)DS(0.015)DLLTCSPTEDATMGSR 80.342 1.7238e-05 26975000.0 6274.860000000001 7151.4 6667.5 5939.300000000001 9417.2 6919.6 6100.0 6713.6 10209.300000000001 9395.900000000001 10374.2 True False 7333.902962402075 7515.375713900906 7613.051758446115 7394.428766625314 8031.942354889403 7651.827479141267 7208.291040321054 7665.273359537702 7896.909850902015 7273.359664264047 7797.999826645748 0.9404851404769393 0.96375684546964 0.9762826273004437 0.9482468493213564 1.0300003248838598 0.9812551486594023 0.924376917230793 0.9829794216390568 1.0126840249365345 0.9327211882476573 1.0 12.928888407325653 -2.0000000000000018 0.16015090676583582 1.0129448855272016 0.7593162660777244 0.0 0.03497789184771241 55.33474472491766 0.5409475228854791 0.04169384181675414 3.3431429115775892 0.009999999999999959 2.0000000000000018 -0.25362861944947723 S(ph)LSLESTDR ddPTM_A549_MK2206_60min_R1 2 SLSLESTDR 9 0 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6;H0Y7V8 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 S(0.806)LS(0.194)LESTDR;S(0.955)LS(0.044)LES(0.001)TDR 141.89 3.8623e-05 28823000.0 3511.2 3767.2 3326.6 3492.2 4427.9 4209.6 3497.4 3620.2 5495.5 4963.6 5444.2 True False 4103.804719401892 3958.9343889878223 3798.3619017093147 4347.789156770813 3776.5617756036613 4655.057077893672 4132.832308921128 4133.374436397524 4250.778024510202 3842.3193126300866 4092.2548877238514 1.0028223637077662 0.9674212622639976 0.9281831180906713 1.0624433902720787 0.9228559508677668 1.137528625564879 1.0099156632005017 1.010048139669165 1.0387373565761742 0.9389247292871385 1.0 11.998680291378513 -6.259664529305238 24.999686222956512 1.021535644573315 0.966270151167322 0.12093379964323359 0.05681288596124968 187.1786134918343 2636478.430976264 0.006538712759224338 0.01636923438683944 5.499655305991075e-07 6.259664529305238 -0.05526549340599307 S(ph)LSLESTDR ddPTM_A549_PD325901_60min_R1 1 SLSLESTDR 9 0 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6;H0Y7V8 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 S(0.953)LS(0.047)LESTDR 136.5 4.4481e-05 15517000.0 2119.4 1841.5 2234.2 2122.0 2411.9 2264.2 2257.0 2282.6 2454.6 2298.1 2721.2 True False 2334.559927780183 1996.6896677448124 2385.8262473360146 2253.071120588339 2242.496464603293 2245.7611058931166 2342.8913700777894 2237.071752334941 2351.4416981014315 2152.9975738037992 2386.5096511080546 0.9782319240553872 0.8366568586126399 0.9997136387980988 0.9440863226939978 0.9396553094022074 0.9410232658604215 0.9817229815056422 0.9373822357249928 0.9853057568862791 0.9021533069452136 1.0 11.220686455360847 -8.12940514027782 0.3227359177556048 1.005034459470604 0.9204041286892725 0.0 0.0495956847438708 1.2598109705243108 0.35063482070043633 0.023907563633405286 0.037891320971341985 7.423263208644164e-09 8.12940514027782 -0.08463033078133153 S(ph)LSLGDKEISR ddPTM_A549_PD325901_60min_R1 1 SLSLGDKEISR 11 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.529)LS(0.471)LGDKEISR 56.648 0.0041133 4850100.0 1669.1 1584.5 1133.9 1679.3 2221.9 2098.4 1464.5 1925.1 1946.4 1762.9 1980.3 True False 1838.545803273522 1718.0313758032328 1210.8532726946148 1783.0265470329862 2065.841409138876 2081.3113261223016 1520.2323489051494 1886.7023702882645 1864.5995767883282 1651.5901931416042 1736.7356541559896 1.0586215575605313 0.989230209958552 0.6972006763361229 1.0266539658849192 1.1894967459183208 1.1984042137568525 0.8753389413450745 1.08634976530447 1.073623134485874 0.9509738509653826 1.0 10.762162465042769 -6.495894156337441 24.93412098217591 1.0509301787750498 0.9123535107331727 0.20177909492839596 0.12050324238242452 824.0942472251716 761473.5098486122 0.016136493392442334 0.037395823343648736 3.1923157724747977e-07 6.495894156337441 -0.13857666804187707 S(ph)LSMDSQVPVYSPSIDLK ddPTM_A549_MK2206_60min_R1 2 SLSMDSQVPVYSPSIDLK 18 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.526)LS(0.453)MDS(0.021)QVPVYSPSIDLK;S(0.348)LS(0.306)MDS(0.341)QVPVY(0.003)S(0.001)PSIDLK 59.306000000000004 0.0015258 4607100.0 1707.67 1441.62 1206.52 1522.09 1496.18 1179.44 1527.27 1414.48 2309.9 2362.45 2604.4 True False 1995.8829474769404 1514.9923003431256 1377.6226783052725 1895.0021183292165 1276.0939039776613 1304.2475579510904 1804.755189696908 1614.9868716633234 1786.7113381523288 1828.7709042072167 1957.655602216671 1.0195271043675835 0.7738809107320441 0.7037104364758429 0.9679956557136448 0.6518480076540167 0.6662293186167573 0.9218961637855849 0.8249596455242992 0.9126790923435254 0.9341637528769019 1.0 10.93491126784868 -9.009431454544703 0.8966299086951786 0.9787688784131743 0.8011185797318742 0.21618477708864015 0.11392208210065845 0.4438854035502782 0.7427781302009057 0.02792902252206025 0.025526883560295692 9.785173837021541e-10 9.009431454544703 -0.1776502986813001 S(ph)LSMDSQVPVYSPSIDLK ddPTM_A549_PD325901_60min_R1 2 SLSMDSQVPVYSPSIDLK 18 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.556)LS(0.444)MDSQVPVYSPSIDLK;S(0.535)LS(0.462)MDS(0.003)QVPVYSPSIDLK 112.3 1.3997999999999999e-09 2389000.0 2796.1 2458.2 2447.8999999999996 2613.8999999999996 2726.1 2839.4 2386.1000000000004 2928.6 2710.6 3116.6000000000004 2656.2 True False 3079.958013619972 2665.3611410536496 2614.029214418508 2775.354666402381 2534.628140534449 2816.2768678000707 2476.9043412240208 2870.186775557745 2596.6829083654125 2919.8173441177187 2329.5042390391054 1.322151710224155 1.1441752697359682 1.122139711364838 1.1913928379658945 1.0880547448928253 1.2089597522955158 1.06327530970526 1.2321019758013685 1.1146933604364315 1.253407182174569 1.0 11.185807240407934 -14.999999998234122 0.10982395902981212 0.44863773415087094 1.2577598155453253 0.0 0.10088581475304627 53.83334357415341 0.4188212879496142 6.606269171006002 0.31363480285640244 1.0000000040660846e-15 14.999999998234122 0.8091220813944544 S(ph)LSPGGAALGYR ddPTM_A549_MK2206_60min_R1 1 SLSPGGAALGYR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(0.864)LS(0.136)PGGAALGYR 176.87 4.5023e-16 288890000.0 2486.3 2648.8 2419.0 2652.9 2833.1 2630.4 2103.6 2289.2 3404.1 3414.8 4163.1 True False 2905.92665580113 2783.6126060604515 2762.0505742303926 3302.8606190932087 2416.3547429848745 2908.747182081792 2485.7968905605526 2613.701110380974 2633.0767852306753 2643.3943083184004 3129.287374285142 0.9286224971476016 0.8895356268442246 0.8826452300058759 1.0554673393803335 0.7721741259180037 0.9295238289664174 0.7943651679253046 0.8352384417803913 0.84143016293995 0.8447272468615192 1.0 11.61161843746228 -10.855697674564487 1.1305832399658058 0.9992631954422698 0.8782443548373052 0.0 0.08552987869972578 0.5097843393983384 1.1679850755874503 0.047577028748836445 0.011883518733309669 1.394126958885889e-11 10.855697674564487 -0.1210188406049646 S(ph)LSPGGAALGYR ddPTM_A549_PD325901_60min_R1 2 SLSPGGAALGYR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(0.854)LS(0.146)PGGAALGYR;S(0.889)LS(0.111)PGGAALGYR 243.85 7.1087e-51 931490000.0 9557.2 9354.1 9716.5 10346.099999999999 10474.0 10962.6 11112.099999999999 9625.2 10750.2 10892.4 11607.9 True False 10527.439908361224 10142.402835216804 10375.920120061044 10985.155099302068 9738.342373338399 10873.324220238448 11534.977046274442 9433.217835176678 10298.406478827514 10204.65200509138 10180.201888540789 1.0341091486811573 0.9962870035645823 1.019225378205963 1.079070456516915 0.9565961932739504 1.0680853227948124 1.1330793998553839 0.9266238468016097 1.0116112226045124 1.0024017319910044 1.0 13.313478552034619 -8.28496242880122 24.977487663701982 0.9997218462471462 1.037639371185899 0.21272749338193842 0.048499093998540674 1239.373435707381 1316001.9256622547 0.007725865179762331 0.009342459077094597 5.188449227194729e-09 8.28496242880122 0.03791752493875289 S(ph)LSPIIGK ddPTM_A549_PD325901_60min_R1 2 SLSPIIGK 8 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 S(0.896)LS(0.104)PIIGK;S(0.684)LS(0.316)PIIGK 145.9 0.00084675 322628000.0 22504.5 22105.4 22372.5 19792.1 26265.8 19904.2 20348.5 19435.5 20470.6 22393.3 22899.0 True False 24789.14027306273 23968.29963690806 23890.83238677155 21014.613065879574 24420.980820090874 19742.106794416475 21122.873302626445 19047.843705645217 19610.291870429075 20979.38321633552 20082.568168720918 1.234361067010962 1.1934877768391825 1.1896303394095828 1.0464106427688038 1.2160287775408694 0.9830469205211154 1.0518013993611548 0.9484764869521365 0.9764832717447252 1.0446563925529908 1.0 14.293656153188918 -6.890045407283787 0.7185955648781301 0.9843736789114197 1.2217778662578203 0.6825846564799594 0.05740872689351672 0.2814189123337782 0.2605928698920376 0.009132984915656275 0.03485584637492954 1.2881148669169482e-07 6.890045407283787 0.23740418734640056 S(ph)LSPILPGR ddPTM_A549_MK2206_60min_R1 1 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.5)LS(0.5)PILPGR 141.25 3.9819e-05 45133000.0 2635.3 2953.0 2299.7 2396.1 3554.4 2509.2 2831.6 2779.2 4563.1 3963.1 3783.0 True False 3080.074213100882 3103.295086717201 2625.8320403297384 2983.144607565015 3031.5524684852085 2774.7218785278424 3346.065067175919 3173.1601109430394 3529.5651357733627 3067.8329575075113 2843.5766945114665 1.0831690311170055 1.091335110710054 0.923425784645792 1.0490818177413452 1.066105399701919 0.9757858417828067 1.1767099771334921 1.1159045286408904 1.2412414064955442 1.0788641514149744 1.0 11.473491000610121 -7.7616120111585145 24.999999999542634 1.121274848045239 1.0316662325876493 0.28562168781430786 0.07169444723136258 6.592958894246691 954832.3172800825 0.014930719775061843 0.021347018636278768 1.7313624284315368e-08 7.7616120111585145 -0.08960861545758969 S(ph)LSPILPGR ddPTM_A549_PD325901_60min_R1 3 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.963)LS(0.037)PILPGR;S(0.999)LS(0.001)PILPGR;S(0.5)LS(0.5)PILPGR 162.8 5.649199999999999e-06 75755000.0 6616.9 5961.66 5696.5 5398.5 7046.6 6582.7 6171.099999999999 6928.7 6673.799999999999 6700.1 7295.9 True False 7288.642816895678 6464.070010647593 6083.098745837262 5731.953084116936 6551.67112545029 6529.092673687231 6405.944587455495 6790.50164304 6393.323394764666 6277.054542553781 6398.550552520675 1.13910842105082 1.010239734388143 0.9506994898150577 0.8958205513995452 1.023930509210292 1.0204018269598776 1.0011555796698217 1.06125623097014 0.9991830715858062 0.9810119481014288 1.0 12.64352941672479 S(ph)LSPKPR ddPTM_A549_MK2206_60min_R1 2 SLSPKPR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.991)LS(0.009)PKPR;S(0.995)LS(0.005)PKPR 49.715 0.015041999999999998 4552000.0 1735.81 1639.14 1816.11 1410.6100000000001 1821.86 1284.1399999999999 1469.8899999999999 1776.47 2177.24 2477.6 2300.13 True False 2028.7722915199936 1722.5652246669922 2073.6617066414055 1756.20951332469 1553.866807403348 1420.0268424568562 1736.9499864356599 2028.2900627112053 1684.09861633784 1917.908439232069 1728.9442406414641 1.173416842388907 0.996310455927656 1.1993803258062539 1.0157698970518043 0.8987373744492999 0.8213259913633797 1.004630424513416 1.173137927200405 0.9740618446509381 1.1092945591585397 1.0 10.755675626720821 -6.502259304041935 22.927472091845704 0.9840779642172204 1.109898696937697 0.22275060144946668 0.10041465344189486 274.03522895944207 304707.6576216537 0.013049604615457554 0.029945011668829593 3.145869450168902e-07 6.502259304041935 0.12582073272047656 S(ph)LSPQLLQQMPSKPEGAAK ddPTM_A549_MK2206_60min_R1 2 SLSPQLLQQMPSKPEGAAK 19 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.498)LS(0.498)PQLLQQMPS(0.004)KPEGAAK;S(0.542)LS(0.458)PQLLQQMPSKPEGAAK 107.9 3.1035e-10 38491000.0 5485.1 6617.2 6872.0 5770.5 8824.0 7059.3 7029.2 6719.3 9450.099999999999 9781.7 9671.5 True False 6410.85078218026 6953.987215653588 7846.552933489564 7184.272759047589 7526.001289082116 7806.310440415911 8306.314652561441 7671.781351993228 7309.667438708735 7572.0071763143105 7269.7996301791345 0.8818469707977756 0.9565583055116795 1.0793355157845275 0.9882353193372073 1.035241914761916 1.073799944638028 1.142578210557471 1.0552947456963389 1.005484031274273 1.0415702717418265 1.0 12.827699885872903 -5.508907479693756 4.253108794301804 1.025317406190843 0.8927879363890957 0.5206276808293644 0.04572179821825602 0.14339424140672796 6.016851306087204 0.007068546627445489 0.039114048862008644 3.0980792309484637e-06 5.508907479693756 -0.1325294698017473 S(ph)LSPQLLQQMPSKPEGAAK ddPTM_A549_PD325901_60min_R1 2 SLSPQLLQQMPSKPEGAAK 19 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.5)LS(0.5)PQLLQQMPSKPEGAAK;S(0.5)LS(0.5)PQLLQQMPSKPEGAAK 130.78 3.7111e-17 40442000.0 11638.7 11751.7 11256.4 11206.7 14048.9 11959.2 13566.9 14102.6 12887.300000000001 13629.0 13845.3 True False 12820.252256041911 12742.05700159473 12020.326994231995 11898.91240673767 13062.153730073882 11861.80824026013 14083.195803592545 13821.312579724321 12345.69159779296 12768.462614060309 12142.415872587952 1.055823848447178 1.0493840052341228 0.989945256394028 0.9799460446417421 1.0757458702730056 0.9768902963568143 1.1598347438738277 1.1382671063776157 1.0167409622053807 1.0515586641111252 1.0 13.567767870389519 -8.976934186071851 24.98310322442218 1.0073856640518972 1.052008301510919 0.03685087410394605 0.05748149717411102 270.1324238629116 292589.97961259313 0.010251629818630733 0.010560470249654105 1.0545466925770417e-09 8.976934186071851 0.04462263745902173 S(ph)LSPVAAPPLR ddPTM_A549_MK2206_60min_R1 1 SLSPVAAPPLR 11 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.573)LS(0.427)PVAAPPLR 143.0 2.7697e-11 3894900.0 1515.4 1340.9 1258.0 1231.5 1611.3 1228.0 1189.1 1159.0 1719.3 1982.4 1768.4 True False 1771.1624720271218 1409.1460825530287 1436.4033164042303 1533.217555284136 1374.2799044762037 1357.9461449195712 1405.1440780402895 1323.2917992886385 1329.8812951579287 1534.574463163405 1329.257474642897 1.3324449971612473 1.0601001758004736 1.0806057846619352 1.1534391075709638 1.0338703604773047 1.0215824780555636 1.0570894690043247 0.9955120242179859 1.0004692999865954 1.1544599089620813 1.0 10.37640486362745 -2.0000000000000004 0.45987829342013903 1.0042920955594326 7.671080256360401 0.5290447011774135 0.06575327591846399 27.044581539987583 0.282309739613785 0.008974048013206178 171.8689750172949 0.00999999999999999 2.0000000000000004 6.6667881608009685 S(ph)LSQIHEAAVR ddPTM_A549_MK2206_60min_R1 1 SLSQIHEAAVR 11 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;H0YD14 Q9NZM1-5 MYOF Myoferlin 1 S(0.552)LS(0.448)QIHEAAVR 81.619 0.00023652 10483000.0 416.92 533.77 549.84 628.83 679.77 568.46 523.04 338.26 989.85 832.03 804.3 True False 487.2859032846427 560.936613083996 627.815579882116 782.8933782292511 579.7767334858739 628.6140598867916 618.0695976605782 386.2093908778041 765.6505554656401 644.0738451300688 604.570112449266 0.8060039576063801 0.9278272305117768 1.038449580874378 1.2949587849415058 0.9589900683926503 1.0397703209973734 1.022329064790554 0.6388165457157192 1.2664379857677657 1.065341855092312 1.0 9.2397658493771 S(ph)LSQIHEAAVR ddPTM_A549_PD325901_60min_R1 1 SLSQIHEAAVR 11 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;H0YD14 Q9NZM1-5 MYOF Myoferlin 1 S(0.633)LS(0.367)QIHEAAVR 82.90799999999999 2.318e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)LSQPTPPPMPILSQSEAK ddPTM_A549_PD325901_60min_R1 2 SLSQPTPPPMPILSQSEAK 19 0 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 S(0.714)LS(0.284)QPT(0.002)PPPMPILSQSEAK;S(0.831)LS(0.169)QPTPPPMPILSQSEAK 64.454 0.00076934 1418700.0 459.78 587.31 817.78 881.57 605.12 596.59 572.83 820.86 928.94 746.22 611.71 True False 506.45652712785335 636.8046748646238 873.2794685106287 936.0225767092652 562.6184587506712 591.7315688387843 594.6293591146037 804.4873033477875 889.8998822758672 699.1035418492985 536.47354794918 0.9440475286506201 1.1870197091711001 1.6278145900184333 1.7447692999728934 1.0487347622290744 1.1030023215512554 1.10840387450181 1.4995842878426437 1.6587954535275002 1.3031463424838319 1.0 9.067363227143545 -11.156283656333764 1.5619287591083533 1.001073412901149 1.374233989358264 0.0 0.27801245757421716 0.5492719541212637 2.4148544096486573 0.20785141456470013 0.0447982461187357 6.977765074768493e-12 11.156283656333764 0.3731605764571151 S(ph)LSRPSSLIEQEK ddPTM_A549_MK2206_60min_R1 1 SLSRPSSLIEQEK 13 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.425)LS(0.425)RPS(0.075)S(0.075)LIEQEK 43.297 0.020536000000000002 6260800.0 1276.8 1289.6 1535.5 1287.7 1507.4 1120.7 1072.6 1321.2 1550.6 1569.4 1484.0 True False 1492.2926252370526 1355.235131673045 1753.2569891404587 1603.186557807049 1285.663456840705 1239.2917301395476 1267.4775360407154 1508.4841460053062 1199.3915757993857 1214.8714500043623 1115.4818436835885 1.3378009097029715 1.214932488006917 1.5717485668352824 1.4372143902521466 1.1525633197176353 1.1109922919472262 1.13626012222234 1.3523161802651398 1.0752228578088794 1.0891001560299407 1.0 10.123451316181548 -7.893616370479979 0.3686249701630463 0.9941643737703427 1.411984019134583 0.4351542514512827 0.12656425581756373 0.7822611042897897 0.24548643037713208 0.060257461513217724 0.11857071872275891 1.2775668359182218e-08 7.893616370479979 0.4178196453642402 S(ph)LSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SLSSPR 6 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.594)LS(0.5)S(0.906)PR 69.812 0.059457 6914400.0 1257.2 949.62 1137.8 1264.4 1021.5 987.87 886.25 1327.2 1032.1 1159.9 1087.8 True False 1384.8300184982756 1029.6478100916797 1215.0179501472198 1342.4991163392526 949.753363983691 979.8251142472546 919.976728724608 1300.7279548317413 988.7244262244307 1086.663716050228 954.0074961323461 1.4515923869702625 1.0792869178344908 1.2735937139624578 1.4072207207824838 0.9955407770212479 1.0270622801388627 0.9643286163413782 1.3634357802271355 1.0363906261039153 1.1390515488145379 1.0 9.897856792054226 -2.000000000001411 0.191949192306524 0.9863123529826955 2.6361784388016725 0.22852941426070728 0.15241450180892488 41.93980148192135 0.45633460817740806 0.1274578048996384 20.808414813211147 0.009999999999967514 2.000000000001411 1.649866085818977 S(ph)LSS(ph)SPVKK ddPTM_A549_MK2206_60min_R1 2 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(0.952)LS(0.058)S(0.95)S(0.04)PVKK;S(0.983)LS(0.052)S(0.779)S(0.186)PVKK 127.42 1.6372e-09 43275000.0 2818.1 2858.5 3088.0 2763.7 4679.5 2929.9 3020.6 2769.6 4808.9 4013.4 3850.9 True False 3293.72638406997 3003.985440359336 3525.9248339079995 3440.8066240672088 3991.1517488961667 3239.940073289783 3569.4039207202914 3162.199281544273 3719.6918282353067 3106.7701525726447 2894.6152505668 1.1378805467928836 1.0377840162940895 1.2180979262157834 1.1886922185577022 1.3788194296684686 1.1192990407465602 1.2331186053211596 1.0924420027584243 1.2850384269574158 1.0732929538612437 1.0 11.499155884003468 -10.985045972260314 1.2295655678450934 0.9989132958657694 1.1964392902306666 0.2755179722824571 0.09175388265472188 0.3948948383079672 1.052434307506748 0.06606853803697854 0.014811551203412723 1.035032597461877e-11 10.985045972260314 0.19752599436489726 S(ph)LSS(ph)SPVKK ddPTM_A549_PD325901_60min_R1 3 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(0.997)LS(0.005)S(0.915)S(0.083)PVKK;S(0.964)LS(0.056)S(0.668)S(0.312)PVKK;S(0.987)LS(0.213)S(0.791)S(0.008)PVKK 145.41 5.2502e-05 239802000.0 33529.7 34491.7 37056.0 34918.0 42164.0 35084.0 38550.6 40049.0 38933.0 40825.0 42783.0 True False 36933.610460739445 37398.43660763169 39570.842995829975 37074.805555468214 39202.54609790341 34798.28753606311 40017.664178697756 39250.19127716728 37296.78140315453 38247.30253276194 37520.96222378214 0.9843460367690035 0.9967344756400519 1.0546329478391827 0.9881091357504916 1.0448171841673992 0.9274359044557418 1.0665415225767616 1.046087012456442 0.9940251846610288 1.0193582537848516 1.0 15.195409205741717 S(ph)LSSDR ddPTM_A549_PD325901_60min_R1 1 SLSSDR 6 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.976)LS(0.007)S(0.017)DR 82.279 0.041775 4045100.0 1156.2 1106.6 795.81 836.69 1280.3 884.87 787.97 684.03 959.2 1228.0 1131.7 True False 1273.5765728505469 1199.857065613037 849.818452194286 888.3704410391409 1190.376144795221 877.663912097714 817.9566295437287 670.3864850388461 918.8881597078524 1150.4638704282083 992.5080744373755 1.283190137845983 1.2089141605152198 0.8562332882541271 0.8950762859463212 1.1993616731733001 0.8842889390045886 0.8241309573298987 0.6754468828063379 0.925824366949099 1.1591481218733393 1.0 9.954935028960673 -5.675771480347194 5.508081359981234 0.9359542801483439 1.2615454401029833 0.4242192242787427 0.1401103100292427 0.12865601744849237 6.233280099418821 0.017548832844829776 0.07063365326184289 2.1097379723920225e-06 5.675771480347194 0.3255911599546394 S(ph)LSSLPK ddPTM_A549_PD325901_60min_R1 1 SLSSLPK 7 0 A6NM62 A6NM62 LRRC53 Leucine-rich repeat-containing protein 53 1 S(0.717)LS(0.254)S(0.028)LPK 70.85600000000001 0.020950999999999997 29256000.0 6903.8 6611.7 6703.0 7880.5 8435.1 7686.4 7414.0 7850.0 9155.8 8167.1 8878.9 True False 7604.668693691058 7168.891162763172 7157.905888413445 8367.260587085959 7842.647675515252 7623.804506817795 7696.143827096467 7693.425591794131 8771.013566152165 7651.427912193994 7786.851587984455 0.9766037798158995 0.920640528686224 0.9192297820929952 1.074537056799324 1.0071654232651477 0.9790612317026498 0.9883511635141531 0.9880020833664679 1.1263876634924346 0.9826086738317413 1.0 12.926824414420407 -8.617751075089643 10.811607026234855 1.0596651627471219 0.9812067996573425 0.1373319415997274 0.05301881551691415 0.38066565485723647 40.60525109147623 0.010096802733444368 0.011448021877561974 2.4112871120122633e-09 8.617751075089643 -0.07845836308977938 S(ph)LSSLR ddPTM_A549_MK2206_60min_R1 2 SLSSLR 6 0 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9;C9J1G1;Q70YC5-2;Q70YC5;Q70YC5-4;Q70YC5-3;Q8TF61 H0Y9X0 FRYL;ZNF365;FBXO41 Protein furry homolog-like;Protein ZNF365;F-box only protein 41 1 S(0.994)LS(0.006)SLR;S(0.999)LS(0.001)SLR 86.833 0.039106 54698000.0 3346.5 3267.0 2705.0 2626.8999999999996 3947.8999999999996 3351.2 3504.9 3332.7 4467.5 4330.0 3625.5 True False 3911.3073859302926 3433.2763455147606 3088.609674780163 3270.4906179260233 3367.169139751507 3705.821759653475 4141.694961839554 3805.1204309656996 3455.618383131531 3351.8499926843974 2725.18829129033 1.4352429879545516 1.2598308735170598 1.1333564306918986 1.200097119299416 1.2355730246284045 1.359840628809847 1.519783045845442 1.396277990451823 1.268029219916894 1.229951707702866 1.0 11.412140198047483 -10.241953392589643 0.8594691174157152 1.0146871773990658 1.3075181655610761 0.20990922875938034 0.12358711583271362 0.36693187303406405 0.5269859247575964 0.059269264895876306 0.02310591219086846 5.728575053386797e-11 10.241953392589643 0.29283098816201036 S(ph)LSSLR ddPTM_A549_PD325901_60min_R1 1 SLSSLR 6 0 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9;C9J1G1;Q70YC5-2;Q70YC5;Q70YC5-4;Q70YC5-3;Q8TF61 H0Y9X0 FRYL;ZNF365;FBXO41 Protein furry homolog-like;Protein ZNF365;F-box only protein 41 1 S(0.997)LS(0.003)SLR 117.18 0.018919 44512000.0 3505.3 3731.0 3958.9 3545.9 4174.3 3543.4 3867.4 3423.1 3744.3 3600.5 4230.6 True False 3861.1554755345287 4045.424463945639 4227.574760799636 3764.92218967681 3881.111568553225 3514.5437252105276 4014.5760233224814 3354.8235851299996 3586.9400921539927 3373.163815534827 3710.2630199829987 1.0406689376841596 1.090333607660024 1.139427242227967 1.0147318854214442 1.046047557181272 0.9472492128675644 1.0820192535409194 0.9042010140686393 0.9667616750713347 0.9091441219577698 1.0 11.857305747566107 -6.773976271700765 1.5060131134141705 0.982936182207136 1.0875494215628205 0.4482894094401756 0.053861619070733974 0.25636893010989037 1.1682423704899563 0.00701810812755399 0.017939603477876327 1.682765998882375e-07 6.773976271700765 0.10461323935568456 S(ph)LSSPTVTLSAPLEGAK ddPTM_A549_MK2206_60min_R1 1 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.532)LS(0.397)S(0.068)PT(0.002)VTLSAPLEGAK 137.69 4.0775999999999997e-13 3188000.0 365.36 552.21 512.95 545.34 736.39 458.34 601.99 542.48 984.42 835.86 790.38 True False 427.0238358056151 580.3151303203875 585.6940231713438 678.9483244812429 628.0680064899346 506.84123457853144 711.3637907152254 619.3782012753239 761.4504417957123 647.0386454700184 594.1068326217215 0.7187660743122758 0.9767858210947131 0.9858395679220637 1.1428051104632582 1.057163412375425 0.8531146365408767 1.1973667893635613 1.0425367413165119 1.281672588136251 1.0890947720879007 1.0 9.214578570354874 -4.51140646970065 0.6595648067987846 1.1159878884802452 1.9522684266962797e-16 0.46194486130800017 0.10886164834705653 5.252840384364891 0.7784227558208149 0.02137821402790115 5.558003550483239 3.080303648805586e-05 4.51140646970065 -1.115987888480245 S(ph)LSSPTVTLSAPLEGAK ddPTM_A549_PD325901_60min_R1 1 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.539)LS(0.395)S(0.065)PTVTLSAPLEGAK 148.15 5.1752e-17 7711600.0 911.36 912.79 889.79 628.98 848.72 1028.1 960.34 1095.0 949.0 1304.1 1017.0 True False 1003.880596292228 989.7140167367837 950.1765001419362 667.8306660827767 789.108835125049 1019.7274944654688 996.8862642182116 1073.1593659891175 909.1168302363973 1221.758903440901 891.9154472941685 1.1255333667980878 1.109650045572492 1.0653212734733053 0.7487600625247552 0.8847350245126855 1.1433006318693635 1.1176914440068242 1.2032075117039336 1.0192858897044705 1.3698147141047827 1.0 9.800763140333775 -7.261234641605356 24.99999979197598 1.0429300761032245 0.9847628213719299 0.02531989086477371 0.15321217345769045 55.235465760553225 6744912.471715206 0.019172869735757582 0.03188151832226754 5.479808206096287e-08 7.261234641605356 -0.05816725473129458 S(ph)LSSS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 SLSSSPVK 8 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(0.998)LS(0.018)S(0.441)S(0.544)PVK;S(0.998)LS(0.003)S(0.193)S(0.806)PVK 94.69200000000001 0.0029124000000000003 17398200.0 7342.7 7090.8 6218.6 6706.3 7063.8 6729.5 6509.8 6649.6 6977.4 7807.7 8407.7 True False 8088.125498589952 7688.366601164769 6640.631591479608 7120.532919887638 6567.663056787072 6674.697183158613 6757.534001299244 6516.968511489718 6684.164142562105 7314.720489529582 7373.606200801555 1.096902286117575 1.0426874438085665 0.9005948257390979 0.9656784924469649 0.8906989169116636 0.9052147621381019 0.9164489962272001 0.8838237809311386 0.9064986602939951 0.9920139875024012 1.0 12.848154653721776 -5.611394236288608 4.473976172028146 0.9378972300405728 1.0856834421790185 0.6596944118820764 0.03925527533661436 0.10699045246214796 3.741780567295589 0.006448738666737732 0.028077439506381394 2.446841082574797e-06 5.611394236288608 0.14778621213844567 S(ph)LSSS(ph)PVKK ddPTM_A549_MK2206_60min_R1 3 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(0.955)LS(0.048)S(0.201)S(0.796)PVKK;S(0.955)LS(0.095)S(0.174)S(0.776)PVKK;S(0.669)LS(0.332)S(0.064)S(0.935)PVKK 91.93700000000001 0.00016459 79998000.0 17053.8 18281.8 16571.3 14311.6 25117.9 20699.6 17877.5 19945.3 27213.5 24008.9 25602.9 True False 19932.064514620648 19212.26553211869 18921.35952077061 17817.942642472142 21423.090183480923 22890.017932717572 21125.610339891762 22772.607354919484 21049.68570102965 18585.272815094784 19244.99332590738 1.035701295244844 0.9982994125674945 0.9831834805210818 0.925848211050603 1.1131773246520908 1.1894011884069247 1.097719805984693 1.183300350863893 1.0937746428154285 0.9657198888230069 1.0 14.232195550376975 -6.770500493791474 24.99567436253183 1.0751761715954777 0.9864700023291328 0.3440637414572215 0.0680360938374461 211.50015533091994 583438.5384780781 0.010745478350267141 0.02051608712249266 1.696287673585183e-07 6.770500493791474 -0.08870616926634489 S(ph)LSSSGTK ddPTM_A549_MK2206_60min_R1 3 SLSSSGTK 8 0 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 S(1)LSSSGTK;S(0.459)LS(0.459)S(0.078)S(0.003)GTK;S(1)LSSSGTK 85.355 0.0029933000000000004 20041600.0 10035.9 10141.6 8341.8 7204.9 12712.7 11139.8 10963.7 11641.599999999999 14930.7 13464.999999999998 14823.6 True False 11729.714565802418 10657.764121724062 9524.792674706534 8970.100823440252 10842.678670411855 12318.60624199922 12955.662373568528 13291.832450904754 11548.920289428532 10423.24714815136 11142.491009452864 1.0527012815941585 0.9564974396373684 0.8548171738820398 0.8050355002153793 0.9730928803275085 1.1055522711706551 1.1627258539026362 1.1928959547401448 1.0364756210824733 0.9354503530053266 1.0 13.443784176432438 -7.004000201285274 24.773036483674122 1.0494870113049428 0.9122873194819378 0.38576348832628593 0.08976306172224638 142.48532081696635 882416.6829531727 0.01362286801593095 0.025322350389206306 9.9083148566558e-08 7.004000201285274 -0.13719969182300507 S(ph)LSSSGTK ddPTM_A549_PD325901_60min_R1 2 SLSSSGTK 8 0 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 S(0.922)LS(0.062)S(0.013)S(0.002)GTK;S(0.963)LS(0.03)S(0.005)S(0.002)GT(0.001)K 77.14 0.004522399999999999 20489000.0 10435.900000000001 11675.6 10969.8 10279.2 12367.3 13157.0 11016.900000000001 12116.7 12994.400000000001 12605.6 13969.900000000001 True False 11495.344885496474 12659.54378752177 11714.276594766188 10914.122838243 11498.663512868821 13049.853754189442 11436.154158178999 11875.022913132741 12448.29055724324 11809.680264714849 12251.690862492442 0.9382659923854706 1.0332895213898954 0.9561355021312606 0.8908258427949486 0.9385368633541878 1.065147162188079 0.9334347631305209 0.9692558395745327 1.0160467397486066 0.9639224819873008 1.0 13.580693249642074 -8.740861528318073 12.03894334016122 1.0075774749791497 0.9663936774892615 0.041125141417111544 0.04742416833298234 1.0271457529203496 596.2007750281736 0.007652832773101418 0.008625290395452406 1.8160946192192182e-09 8.740861528318073 -0.04118379748988821 S(ph)LSSSLDDTEVKK ddPTM_A549_MK2206_60min_R1 2 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 S(0.999)LS(0.001)SSLDDTEVKK;S(0.999)LS(0.001)SSLDDTEVKK 90.75399999999999 7.0361e-06 7454300.0 2502.3 2444.4 2192.5 2392.6 3363.6 3166.2 2769.5 2684.4 4065.3 3883.9 3664.5 True False 2924.6270646386884 2568.8095191234397 2503.429468375419 2978.787107407894 2868.8188957339758 3501.2451824465384 3272.682301011339 3064.921920630216 3144.5160409501104 3006.5242925143025 2754.5035149450896 1.06176196500406 0.9325853117216474 0.9088496183768073 1.0814243261066505 1.0415012651712536 1.2710984623725683 1.1881205753613202 1.1126948664254344 1.1415908616158712 1.0914940845788816 1.0 11.427576588549158 -6.354357975474949 6.276777308479656 1.0940989116193978 0.9646566288832461 0.3935401499256992 0.07865966393908652 0.23414331932673157 13.10220907520948 0.01306246683796438 0.030668704641469643 4.4222371080120186e-07 6.354357975474949 -0.12944228273615166 S(ph)LSSSLDDTEVKK ddPTM_A549_PD325901_60min_R1 2 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 S(0.999)LS(0.001)SSLDDTEVKK;S(0.996)LS(0.004)S(0.001)SLDDTEVKK 115.8 7.4623000000000005e-06 17765600.0 7193.7 7128.6 7800.5 7309.7 8011.7 7611.0 7542.9 8122.0 7736.9 8823.0 9029.7 True False 7923.99912827796 7729.3521398238745 8329.888838217075 7761.203567466809 7448.985830864541 7549.018539419004 7829.949187133258 7960.000338414258 7411.744998794501 8265.914274257402 7919.104143984415 1.000618123490302 0.9760387032787438 1.0518726217970886 0.9800608031354718 0.940634912160236 0.9532667334793749 0.9887417875519567 1.0051642450567984 0.9359322549665774 1.0437941115519278 1.0 12.951121517980493 -6.505090396383351 24.671571875281806 0.9699642975735255 1.0077967093075237 0.06412288021376766 0.034699496731363834 724.2985187686278 1004566.0299758061 0.004330393192403293 0.009869433894312492 3.1254287559070047e-07 6.505090396383351 0.037832411733998206 S(ph)LSVEHLETK ddPTM_A549_PD325901_60min_R1 1 SLSVEHLETK 10 0 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 S(0.546)LS(0.453)VEHLETK 70.41199999999999 0.00096149 33310000.0 1286.7 1106.1 1184.8 1363.4 1803.1 1377.8 1252.3 1392.3 1435.5 926.11 1361.6 True False 1417.3248367815243 1199.314928858288 1265.2076527811794 1447.6141214939391 1676.4564763573094 1366.5796536081343 1299.9569617848545 1364.5294842617798 1375.1709270857189 867.635256549079 1194.131831893549 1.186908177913703 1.0043404729915961 1.0595209163588954 1.212273287446362 1.4039123918997558 1.144412716509812 1.088620977236238 1.1426958463187682 1.1516072935641404 0.7265824705244308 1.0 10.221746403274874 -10.604642687373394 0.614112551814142 0.9834550881528104 1.1573472374832954 0.35575161000721844 0.1278985153776788 1.2240711583064283 0.7077339917123611 0.11503226165044107 0.022223587277034985 2.4851769256533986e-11 10.604642687373394 0.17389214933048502 S(ph)LSVLSPR ddPTM_A549_MK2206_60min_R1 1 SLSVLSPR 8 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 S(0.5)LS(0.5)VLSPR 46.461999999999996 0.039591 1605200.0 308.0 317.47 336.71 289.46 394.58 503.16 230.11 258.52 363.43 610.04 390.22 True False 359.9828701229734 333.6278669759938 384.4605410703246 360.37771299435315 336.5378046969654 556.4040572294236 271.9180084079146 295.16600168429557 281.11368527845394 472.23154030881955 293.31760447588283 1.2272801380817628 1.1374287185119343 1.310731218323228 1.2286262655059428 1.1473494927053933 1.8969337289646804 0.9270429195472045 1.0063016920232781 0.9583934990222098 1.609966579239697 1.0 8.196319851827203 S(ph)LSVPVDLSR ddPTM_A549_PD325901_60min_R1 1 SLSVPVDLSR 10 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.925)LS(0.075)VPVDLSR 166.87 9.9615e-10 8330800.0 2287.8 2598.7 2714.2 2821.3 3166.2 2343.9 2690.0 2622.0 3061.0 2664.1 2927.8 True False 2520.0557718106556 2817.7015691384418 2898.401933810498 2995.565293362807 2943.817034797025 2324.812055517568 2792.369422024482 2569.702153080793 2932.3568149142375 2495.8882713418493 2567.6991608533585 0.9814451047190167 1.097364368885799 1.1287934264258717 1.1666340586282895 1.1464805066254982 0.905406712344343 1.0874986698583706 1.0007800727818787 1.1420172813156535 0.9720329816645485 1.0 11.326260466651334 S(ph)LSYS(ph)PVER ddPTM_A549_MK2206_60min_R1 1 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.89)LS(0.111)Y(0.001)S(0.998)PVER 94.465 0.0010911 20036000.0 3083.9 3190.3 2741.0 2787.7 3626.3 3029.4 2913.5 2863.5 4370.0 4005.2 4157.4 True False 3604.386925883886 3352.6726431269485 3129.7150161081045 3470.686625144608 3092.8760737305643 3349.9690972470307 3442.8452370451487 3269.4098941009624 3380.2019774560263 3100.422538267792 3125.002841597138 1.1534027674809226 1.072854270242344 1.001507894472364 1.1106187101483713 0.9897194436309203 1.071989136347446 1.1017094740578113 1.0462102147817633 1.081663649217183 0.9921343100869683 1.0 11.609641786294807 -10.815905409093098 0.9021099106307768 0.9970608193386404 1.0680946525204185 0.2887699612805794 0.0443555067889974 0.723437870623361 0.9721923666354211 0.03568517059767488 0.007501232265971113 1.527898803878664e-11 10.815905409093098 0.07103383318177803 S(ph)LSYS(ph)PVER ddPTM_A549_PD325901_60min_R1 2 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.762)LS(0.164)Y(0.091)S(0.984)PVER;S(0.444)LS(0.225)Y(0.343)S(0.987)PVER 79.889 0.0019774000000000003 104977000.0 23398.7 23634.7 23906.9 24501.0 26684.0 26319.0 26263.9 26347.0 26691.0 27013.0 27720.0 True False 25774.118798787462 25626.479114986858 25529.365997868306 26014.371124191748 24809.807894802554 26104.666790036634 27263.387086657523 25821.48841617833 25569.270090452745 25307.394569932585 24310.615731557864 1.0602001645449814 1.0541271104754808 1.0501324310238827 1.0700827741858558 1.0205339169010303 1.0737970225965892 1.1214601632350527 1.0621486802845221 1.0517738576757234 1.0410017931829176 1.0 14.56929881350085 -10.132346379023472 0.8000554578813954 1.0029316217756048 1.0632325728785716 0.2513079792386975 0.025454548464546454 0.3813672750389857 0.48112678362700245 0.012019636298769698 0.004883031900985512 7.373159365691401e-11 10.132346379023472 0.06030095110296685 S(ph)LSYSPVER ddPTM_A549_MK2206_60min_R1 2 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.598)LS(0.104)YS(0.299)PVER;S(0.805)LS(0.155)YS(0.04)PVER 148.9 2.5481e-05 78433000.0 5364.5 5079.2 4210.5 4413.4 5869.6 4695.3 4245.9 5006.3 7539.299999999999 6400.700000000001 6538.9 True False 6269.896450567174 5337.70958498273 4807.612212814005 5494.683198125057 5006.189615412102 5192.153529512106 5017.325070180193 5715.958356150743 5831.6605877881475 4954.7774245207875 4915.110665540848 1.2756368833207643 1.0859795329542963 0.9781289862951613 1.1179164767636895 1.0185303965808534 1.0563655394198073 1.0207959518299263 1.1629358411448447 1.186475948277849 1.0080703694543518 1.0 12.263008184407923 -5.263951575282888 6.383911517785985 1.0784995447485595 1.2796724498775967 0.4414836991518204 0.06671863959610452 0.10322370495538177 24.154779398118375 0.010766446495444924 0.09010447242819526 5.445633693794551e-06 5.263951575282888 0.20117290512903718 S(ph)LT(ph)NSHLEK ddPTM_A549_MK2206_60min_R1 1 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 2 S(0.998)LT(0.808)NS(0.194)HLEK 84.71799999999999 0.0020309 7629500.0 3052.4 2906.1 2386.7 2363.5 4131.2 3088.7 3249.5 3507.5 5331.5 4106.1 4762.7 True False 3567.5704959849445 3054.0080770432955 2725.169948538933 2942.557606101547 3523.50595256755 3415.5441838868724 3839.892087790703 4004.6988662682497 4123.923762656018 3178.5291581896986 3579.9901461669992 0.9965308144226732 0.8530772299228648 0.7612227512572068 0.821945727770247 0.9842222488629123 0.9540652472308633 1.0725985075411377 1.1186340472350111 1.151937182584537 0.887859750561846 1.0 11.805739901175203 -7.298891382209378 1.4891896753084912 1.0774139554625601 0.8558478223003173 0.4193612549074043 0.08995154255272701 0.20646071428333268 0.8959103332303712 0.013055653885357394 0.025184899220847965 5.0246824197307296e-08 7.298891382209378 -0.22156613316224283 S(ph)LT(ph)RS(ph)PPAIR ddPTM_A549_PD325901_60min_R1 1 SLTRSPPAIR 10 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)LT(1)RS(1)PPAIR 48.659 0.012381999999999999 8079800.0 0.0 153.05 175.94 0.0 140.26 182.08 91.66799999999999 211.73 147.99 165.14 0.0 True False 0.0 165.94806062902174 187.88034641316742 0.0 130.40862147073165 180.5972008484316 95.15647590265431 207.5068790510283 141.77049494908786 154.71303221703124 0.0 0.0 S(ph)LT(ph)RSPPAIR ddPTM_A549_MK2206_60min_R1 1 SLTRSPPAIR 10 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.997)LT(0.769)RS(0.235)PPAIR 42.788999999999994 0.039555 4631900.0 187.48 380.48 269.34 283.96 418.83 332.65 280.07 296.43 286.03 459.62 371.67 True False 219.12204055407474 399.8448068385236 307.5364620352271 353.53021274744896 357.22066182074605 367.85080220480097 330.95509371519995 338.44986027880174 221.24466169605182 355.7915227800466 279.37408142983816 0.7843320304897536 1.43121654232245 1.10080527320664 1.2654366895385545 1.2786463940838342 1.316696238685201 1.1846306286587855 1.2114576217901583 0.7919298045248878 1.2735308907651832 1.0 8.126054372558212 -8.748609001445622 24.841029681980185 0.9017446346050555 1.20990325283036 0.04964013837489567 0.19581687338406498 138.02177654032147 267225.18944096344 0.02617011350139218 0.029579707626637128 1.7839841788916157e-09 8.748609001445622 0.30815861822530444 S(ph)LTAEEVK ddPTM_A549_MK2206_60min_R1 1 SLTAEEVK 8 0 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 S(0.999)LT(0.001)AEEVK 74.16199999999999 0.0050767 1050800.0 1115.7 991.31 1113.9 922.76 1223.7 980.42 942.14 1022.2 1583.1 1301.6 1515.1 True False 1304.0028837538994 1041.7634447726464 1271.8677695887702 1148.8362414242702 1043.6953510255873 1084.167393649875 1113.3146427423087 1167.0999803562083 1224.5303776912208 1007.5676559995405 1138.858855367255 1.1450083367296549 0.9147432448393285 1.116791394820057 1.0087608626916262 0.9164395975030816 0.9519769623253768 0.9775703437659894 1.024797739294784 1.07522575946985 0.8847168823871715 1.0 10.153373242173817 -13.2549056230186 12.461658893319756 0.41714958259391677 1.0210795479648123 0.0 0.0828913638335667 0.0 0.0 0.0 0.009125161218173411 5.560250745243931e-14 13.2549056230186 0.6039299653708955 S(ph)LTAHSLLPLAEK ddPTM_A549_MK2206_60min_R1 2 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.496)LT(0.496)AHS(0.007)LLPLAEK;S(0.986)LT(0.014)AHSLLPLAEK 142.85 2.3729e-12 5252600.0 1832.31 1851.2 1811.57 1546.26 3237.4500000000003 1800.8 2074.54 2400.69 3009.46 2685.06 2616.94 True False 2141.55913232151 1945.4181728854994 2068.477866373936 1925.0937694142485 2761.225393624082 1991.3594607257055 2451.4570647192863 2740.9951593047817 2327.822115120094 2078.5030811448423 1967.0815741302772 1.0886986897167068 0.9889870346356348 1.051546561961209 0.9786547719890096 1.4037167700302038 1.0123420842911217 1.2462406729640434 1.3934323799035542 1.1833887042276394 1.056643053587561 1.0 10.941841071537795 S(ph)LTAHSLLPLAEK ddPTM_A549_PD325901_60min_R1 5 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.5)LT(0.5)AHSLLPLAEK;S(0.998)LT(0.002)AHSLLPLAEK;S(0.498)LT(0.498)AHS(0.003)LLPLAEK;S(0.994)LT(0.006)AHSLLPLAEK;S(0.493)LT(0.493)AHS(0.013)LLPLAEK 173.68 7.994400000000001e-22 77687750.0 5591.862 6743.740000000001 5482.66 6290.8099999999995 7723.63 7262.85 5936.92 6928.790000000001 6547.76 6913.79 7001.29 True False 6159.543713728769 7312.0586369575885 5854.746277512879 6679.379046233895 7181.148873876993 7203.703757590242 6162.852739407282 6790.589847919402 6272.580417648754 6477.252119485214 6140.175714834014 1.003154306944012 1.1908549488726243 0.9535144512832804 1.087815619037941 1.169534750695831 1.1732080794018414 1.0036932207849496 1.1059276091259174 1.0215636667359314 1.0548968661982847 1.0 12.584064226787238 -8.832133330203021 1.3535702367938904 1.0063764611687156 1.090852248570306 0.09191199585466803 0.07419236126678518 0.44477574678284826 1.6153034130088155 0.014235016790894787 0.014770526242210629 1.4718605657789182e-09 8.832133330203021 0.08447578740159045 S(ph)LTALS(ph)EPR ddPTM_A549_MK2206_60min_R1 1 SLTALSEPR 9 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 2 S(0.841)LT(0.191)ALS(0.968)EPR 57.348 0.015747 1902500.0 524.15 496.87 404.83 392.64 684.76 639.37 505.74 647.08 717.82 566.64 613.26 True False 612.6137057628451 522.158560696639 462.2409813830883 488.8368176262793 584.032711096087 707.027709020543 597.626411595405 738.805571599389 555.2349161229943 438.63563045142854 460.9706168850388 1.3289647611436035 1.1327371888149216 1.0027558470139244 1.0604511431326002 1.2669629900548274 1.5337804257421213 1.2964522893754131 1.6027172764107855 1.2044909063292075 0.9515479173389909 1.0 8.848530983324679 -9.961629883687372 1.1534199629734911 1.0314641355819179 1.2648804184627598 0.28560862717752744 0.17390787184733864 0.48798898416774594 1.3092238707921326 0.05987641030227621 0.03499953364657828 1.0923708848916653e-10 9.961629883687372 0.23341628288084193 S(ph)LTEEQQQR ddPTM_A549_MK2206_60min_R1 1 SLTEEQQQR 9 0 H3BU04;Q9BVW5 H3BU04 TIPIN TIMELESS-interacting protein 1 S(0.965)LT(0.035)EEQQQR 100.69 0.00076469 3881300.0 1064.4 1261.0 1376.7 961.59 1359.4 1178.3 882.49 926.75 1561.9 1899.8 1720.4 True False 1244.044697918483 1325.179513833521 1571.9367612827539 1197.1795931674153 1159.4340607862905 1302.986923907762 1042.8270098644145 1058.119650552843 1208.132143841778 1470.6338605315977 1293.1771993755035 0.9620063658091502 1.0247470450866842 1.2155617668188612 0.925766085069821 0.8965778714210243 1.0075857543243074 0.8064068948694834 0.8182325292031335 0.9342355745409098 1.1372253247596624 1.0 10.336704260618033 S(ph)LTEEQQQR ddPTM_A549_PD325901_60min_R1 2 SLTEEQQQR 9 0 H3BU04;Q9BVW5 H3BU04 TIPIN TIMELESS-interacting protein 1 S(0.948)LT(0.052)EEQQQR;S(0.865)LT(0.135)EEQQQR 98.75399999999999 0.0008255000000000001 8134000.0 3371.1 3195.3 2755.4 3814.8999999999996 3995.1000000000004 3382.7 2605.0 3120.7 3153.7 3021.5 3529.7 True False 3713.3315903273433 3464.5791449063245 2942.398013566223 4050.5377087334823 3714.497958346788 3355.152412730611 2704.1347005106977 3058.45519035821 3021.1609562871713 2830.7219743475835 3095.569276611824 1.199563394811721 1.1192058181616245 0.9505191939321576 1.308495254600438 1.1999401810875951 1.0838563485172288 0.8735500513399717 0.9880105780432618 0.9759629607107051 0.9144431028356366 1.0 11.59598903078082 -7.532394544564929 20.57121474915529 0.9803788332549825 1.149759475417716 0.5381323061033428 0.08895782457696627 15.80682146312626 34170.48461061835 0.013005034065793867 0.019320708916478687 2.9349820901194398e-08 7.532394544564929 0.16938064216273352 S(ph)LTFTGGAK ddPTM_A549_MK2206_60min_R1 2 SLTFTGGAK 9 0 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 S(0.494)LT(0.146)FT(0.359)GGAK;S(0.777)LT(0.114)FT(0.108)GGAK 116.12 0.00019601 43276000.0 6929.4 6730.5 7145.200000000001 7052.200000000001 8541.0 6411.299999999999 6353.6 6082.9 9458.5 10378.1 9199.0 True False 8098.913312435494 7073.053701710162 8158.496801567183 8779.989316585285 7284.630214194288 7089.739510523492 7507.966877669483 6945.169703099959 7316.164852120778 8033.6800020965175 6914.634420515729 1.1712713673489386 1.0229107240614779 1.1798883795448263 1.2697691277119503 1.0535090897330421 1.0253238391733661 1.0858082179143609 1.004416037165122 1.0580696544727957 1.161837273458822 1.0 12.755437262190972 -6.973903837774219 24.995152423855554 1.0312190974153033 1.1535998211959124 0.3109988514376617 0.07010909828519293 143.59131018814844 137532.45195193816 0.008457830091026018 0.015983562633922015 1.0619306656700423e-07 6.973903837774219 0.12238072378060916 S(ph)LTFTGGAK ddPTM_A549_PD325901_60min_R1 1 SLTFTGGAK 9 0 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 S(0.928)LT(0.014)FT(0.058)GGAK 125.97 6.7248e-05 35296000.0 12715.0 13942.0 14472.0 15298.0 15989.0 14046.0 15808.0 16508.0 15303.0 15478.0 16285.0 True False 14005.817439711725 15116.941269453248 15454.15694720562 16242.922715721212 14865.987799055538 13931.614032936452 16409.582090469517 16178.734989724526 14659.868127615991 14500.716438507992 14282.04823912049 0.9806588806602592 1.058457513681117 1.082068670295803 1.1372964468240359 1.0408862615612484 0.9754633088814144 1.1489655976319573 1.132802152663842 1.0264541809528833 1.0153107030396762 1.0 13.80191527575954 -8.972205166101467 17.201492497898617 1.0116692107016063 1.071006504323429 0.1742134605832636 0.054704481717154536 7.171859820735785 4438.792666055053 0.009721361961934767 0.010154772976679827 1.066092366988761e-09 8.972205166101467 0.05933729362182261 S(ph)LTIAEFK ddPTM_A549_MK2206_60min_R1 2 SLTIAEFK 8 0 A0A494C0X0;Q99426;K7EK42;K7EL99 A0A494C0X0 TBCB Tubulin-folding cofactor B 1 S(1)LTIAEFK;S(1)LTIAEFK 108.67 0.0017324000000000003 7841000.0 1859.81 2147.8 2223.8999999999996 1611.37 2745.9 2249.4 1848.5900000000001 2049.6 3008.7 2892.8 2868.8 True False 2173.7004600110604 2257.1138460044713 2539.282460533681 2006.1557223371472 2341.981747471735 2487.430014969124 2184.454874463459 2340.137076636751 2327.2342539066235 2239.3144708631467 2156.3977851478967 1.0080238789811116 1.0467056966716681 1.1775575350813692 0.9303272968255042 1.0860620260334344 1.1535116721512138 1.0130110916959776 1.085206585146002 1.0792230774560039 1.0384514797252786 1.0 11.074407617541757 -10.779087488707068 0.9683389651249096 0.9990050149760177 1.0662310200351355 0.05491965747045757 0.06557798223304302 0.9511459409198282 1.5458742186568097 0.045082614372969995 0.010725934849852264 1.6630775893214014e-11 10.779087488707068 0.0672260050591178 S(ph)LTIAEFK ddPTM_A549_PD325901_60min_R1 2 SLTIAEFK 8 0 A0A494C0X0;Q99426;K7EK42;K7EL99 A0A494C0X0 TBCB Tubulin-folding cofactor B 1 S(0.924)LT(0.076)IAEFK;S(1)LTIAEFK 125.48 0.0010960999999999998 13609500.0 2832.3 3366.8 3555.8 3399.6000000000004 4018.0 3596.0 3676.4 3686.8999999999996 3846.3999999999996 3721.0 3726.6 True False 3119.8330109709427 3650.5320517856276 3797.1179707624237 3609.5855709482153 3735.7895413474957 3566.715368250001 3816.3074138032716 3613.361887182901 3684.749184216307 3486.055424970169 3268.251824863764 0.9545877056462723 1.1169678003431693 1.161819276554892 1.1044392428660788 1.1430543732667298 1.0913220765657121 1.1676907467074857 1.1055946973527728 1.1274373523435284 1.0666422331502818 1.0 11.674303434756775 -10.718543338787844 0.8876369146198295 0.9973090768700156 1.112626931359646 0.1669895433840497 0.057295689656805586 0.5164776743992775 0.6961950009652311 0.03962707746555402 0.009374742564956467 1.9118625279393256e-11 10.718543338787844 0.11531785448963039 S(ph)LTLTPTR ddPTM_A549_MK2206_60min_R1 1 SLTLTPTR 8 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802;A0A2R8Y4W8;A0A2R8YG73 Q3V6T2 CCDC88A Girdin 1 S(0.996)LT(0.003)LTPTR 70.55199999999999 0.006543300000000001 4692200.0 1004.9 1987.2 1378.9 1468.8 2941.2 1966.9 1886.3 1986.4 2840.6 2697.9 2893.3 True False 1174.5025525538176 2088.339991982532 1574.4487543639061 1828.6560659369375 2508.5533761840807 2175.036052477448 2229.016293337312 2267.9782830948675 2197.208635506085 2088.442516227075 2174.8137589822977 0.5400474167973929 0.960238541510685 0.7239464748929435 0.8408334085547884 1.1534566423554153 1.0001022126580872 1.0249228395448347 1.0428379320885692 1.0102973766977945 0.9602856831310281 1.0 11.086676145165079 -4.6869029460130545 0.6138720075433826 1.0150518946938218 1.9738917683676036e-12 0.6246530222898912 0.09984849425743716 2.8265804125727594 0.4418501777972868 0.015830878155345642 2.3798102691299423 2.056350087606292e-05 4.6869029460130545 -1.0150518946918479 S(ph)LTLTPTR ddPTM_A549_PD325901_60min_R1 2 SLTLTPTR 8 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802;A0A2R8Y4W8;A0A2R8YG73 Q3V6T2 CCDC88A Girdin 1 S(0.997)LT(0.003)LTPTR;S(0.999)LT(0.001)LTPTR 123.86 0.0011299 15864800.0 3335.8 3527.6000000000004 3688.7 3185.7 3873.3 3649.2 3612.1000000000004 3677.1 3346.0 4213.799999999999 3724.2 True False 3674.4479603138325 3824.883232113275 3939.0373639550444 3382.473453750361 3601.252770159599 3619.4821250884015 3749.5604421169614 3603.757355870854 3205.379256028435 3947.739948868393 3266.1470096489097 1.1250099733596537 1.1710689141712656 1.2060196164833579 1.0356158016641006 1.102599717502217 1.108181020142591 1.1480072486143285 1.1033665494004312 0.9813946667308748 1.208684096951518 1.0 11.673374012891234 -8.698155726454099 4.669483052359586 0.9910827321805071 1.1271214265625549 0.0 0.07723389607012564 0.08511714242923785 3.672308959427581 0.0071837105452642255 0.008069250141189106 2.003753405838453e-09 8.698155726454099 0.13603869438204774 S(ph)LTNDWEDHLAVK ddPTM_A549_PD325901_60min_R1 1 SLTNDWEDHLAVK 13 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 1 S(0.57)LT(0.43)NDWEDHLAVK 120.9 3.0208999999999997e-06 7129500.0 1436.1 1454.6 1197.7 1354.4 1111.8 1271.5 1093.1 1127.0 1753.5 1927.0 2025.3 True False 1581.8918147990557 1577.1842469191442 1278.9831243551814 1438.0582119344233 1033.7110035017793 1261.145325564482 1134.6985186672716 1104.5211008856038 1679.8064929605068 1805.328891136123 1776.2009394344927 0.8906040863274731 0.887953728603076 0.7200666861275191 0.8096258593311366 0.5819786379748748 0.710024016745541 0.6388345448283217 0.6218446777971312 0.9457299879006504 1.0163990182951395 1.0 10.794579085903793 -8.861407226504214 6.556166927895485 0.9760455259160248 0.7313921148336194 0.5816222023750579 0.09629266975853422 0.11761909340747978 6.682415047640793 0.017714009128336632 0.01880257421662071 1.3759187010798433e-09 8.861407226504214 -0.24465341108240535 S(ph)LTNLSFLTDSEKK ddPTM_A549_PD325901_60min_R1 1 SLTNLSFLTDSEKK 14 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.976)LT(0.02)NLS(0.004)FLTDSEKK 81.317 0.00019048 1627400.0 2446.1 2347.5 2097.5 2524.4 2421.8 2417.8 2621.8 2594.2 2496.5 2487.2 3259.6 True False 2694.4262712763552 2545.332063551968 2239.848963292137 2680.326454671632 2251.701122756438 2398.110238419036 2721.5740337040097 2542.4566458894706 2391.5807868126085 2330.157767531792 2858.6898643068553 0.9425388549204063 0.8903841215280389 0.7835228967152167 0.937606589696126 0.7876689076597004 0.8388843674025144 0.9520354298257913 0.8893782699670145 0.8366002960564222 0.8151138731856749 1.0 11.48113839693741 -10.865504155829365 0.9548416386766291 1.0052582144722497 0.8696677113522394 0.0 0.07755237175211319 0.4645336575480358 0.7022554684688512 0.0457109908968945 0.009472341065696168 1.362999963393308e-11 10.865504155829365 -0.1355905031200103 S(ph)LTNS(ph)HLEK ddPTM_A549_MK2206_60min_R1 3 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 2 S(0.93)LT(0.092)NS(0.978)HLEK;S(0.892)LT(0.149)NS(0.959)HLEK;S(0.939)LT(0.189)NS(0.872)HLEK 58.04 0.005958 39103100.0 4861.2 6122.1 5281.799999999999 5182.030000000001 7935.799999999999 6291.5 5423.1 6848.000000000001 8957.0 7692.2 7574.700000000001 True False 5681.6517150707705 6433.688740396669 6030.838661831374 6451.627582630165 6768.454332490688 6957.2623540403 6408.407072256579 7818.724971120442 6928.2538013898475 5954.526677535082 5693.692938915151 0.9978851645191329 1.1299676342613787 1.059213892728901 1.1331182857675193 1.1887634976290655 1.2219244045440047 1.125527340692455 1.373225612094597 1.2168295473113315 1.0458109949760706 1.0 12.475148975239714 -4.0819092708823765 0.9445468070180411 1.1396048409207882 1.2333164003149955e-10 0.16616688921764222 0.09723689283650183 28.752225485267754 3.441011520297973 0.017535285869963283 56.02925105971012 8.281151484316653e-05 4.0819092708823765 -1.1396048407974566 S(ph)LTNS(ph)HLEK ddPTM_A549_PD325901_60min_R1 4 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 2 S(0.997)LT(0.016)NS(0.988)HLEK;S(0.993)LT(0.198)NS(0.809)HLEK;S(0.998)LT(0.004)NS(0.998)HLEK;S(0.991)LT(0.309)NS(0.7)HLEK 99.941 0.00027632 94058000.0 23946.5 23588.3 23793.399999999998 22413.2 26467.1 23038.5 22805.6 24494.800000000003 24862.600000000002 26216.6 27692.0 True False 26377.531051518436 25576.16882414604 25408.16320533735 23797.612459929558 24608.142202538176 22850.882094390327 23673.479587703154 24006.231998201136 23817.71138402047 24561.279401847067 24286.059554051255 1.086118190265176 1.0531213911924866 1.046203611120558 0.9798877585293487 1.0132620381569144 0.9409052976887097 0.9747764776338155 0.9884778526863391 0.9807153495202289 1.0113324208558117 1.0 14.56784080929299 -6.012103353246425 1.6152713241341827 0.9863052504698272 1.0779924127675442 0.7418760057940128 0.020093735699621168 0.1491022703863041 0.7075606830028964 0.0027303783763960475 0.01356032269760608 9.725157572816826e-07 6.012103353246425 0.091687162297717 S(ph)LTNSHLEK ddPTM_A549_MK2206_60min_R1 2 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.994)LT(0.006)NSHLEK;S(0.998)LT(0.002)NSHLEK 138.75 4.2609e-05 40904000.0 10501.7 12399.9 10710.3 9437.8 15761.4 11346.2 11951.8 12202.3 19613.1 16597.8 16792.5 True False 12274.130218085806 13031.001945744865 12229.18158957411 11750.061423678935 13442.918939000332 12546.847353001995 14123.287353394951 13932.013392976492 15170.764165684855 12848.345452327267 12622.45880057727 0.9724040626319546 1.032366367886177 0.9688430584550473 0.9308853060500037 1.065000025065286 0.9940097687170255 1.1189014419875978 1.103747979144866 1.2018866058799134 1.0178956141048896 1.0 13.623705348021861 -7.755429830542347 24.807500852269232 1.100128527186771 0.9948918252578972 0.37740061961410853 0.059627295658945347 128.18847098881525 529160.6743658475 0.011941270931395003 0.017456827530772764 1.756184620041283e-08 7.755429830542347 -0.10523670192887369 S(ph)LTNSHLEK ddPTM_A549_PD325901_60min_R1 2 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.999)LT(0.001)NSHLEK;S(0.991)LT(0.009)NSHLEK 178.71 3.7752e-08 77065000.0 25834.0 26307.0 27084.0 24869.0 34186.0 30130.0 28267.0 29478.0 30459.0 32307.0 33049.0 True False 28456.64866201438 28523.983214424534 28922.083109322633 26405.101648403095 31784.893295297534 29884.63126956967 29342.716153295903 28890.038164956375 29178.914154025733 30267.130506452904 28984.182514872155 0.9817992502432287 0.9841223984767731 0.9978574725881036 0.9110176433250895 1.0966289381799297 1.0310669018950416 1.0123699758735574 0.9967518714779182 1.0067185486102173 1.0442637287052154 1.0 14.822978175205975 -6.735488948889049 24.999985241668476 1.0109918858725218 0.9718836493944214 0.33001931314720423 0.03543871484169138 260.59766069293784 251051.7621071304 0.00474774650099309 0.009880505579306312 1.8387007410745827e-07 6.735488948889049 -0.039108236478100356 S(ph)LTNSHLEKK ddPTM_A549_PD325901_60min_R1 3 SLTNSHLEKK 10 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.828)LT(0.14)NS(0.032)HLEKK;S(0.852)LT(0.136)NS(0.012)HLEKK;S(0.995)LT(0.005)NSHLEKK 84.566 0.00019742 26720800.0 6532.0 6956.599999999999 6976.2 7467.200000000001 7977.300000000001 8399.7 8456.7 8802.9 7441.799999999999 8755.0 9326.0 True False 7195.123831395754 7542.857096189825 7449.646883298505 7928.431984758354 7417.001968190984 8331.29562811166 8778.524346183802 8627.319253758544 7129.047025556608 8202.207805862348 8178.961122384869 0.8797112156094659 0.9222267942496877 0.9108304553385985 0.9693690758670015 0.9068391275135799 1.0186251656472445 1.0733055475906343 1.0548184695665774 0.8716323404503332 1.002842253818013 1.0 12.997701890816169 -5.951726352996527 1.2176234205699195 0.9616983584767872 0.8874780274469176 0.20067149801953243 0.0599659733871769 1.1570648481648045 2.716251579608952 0.010933656602331006 0.07863104207126 1.1175672000546145e-06 5.951726352996527 -0.07422033102986958 S(ph)LTPAVPVESKPDKPSGK ddPTM_A549_MK2206_60min_R1 3 SLTPAVPVESKPDKPSGK 18 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;H0YA91;H0Y944;E7EQK6;P20810-5;F8W7E0;E9PCH5;P20810-3;P20810-2;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 S(0.533)LT(0.467)PAVPVESKPDKPSGK;S(0.879)LT(0.121)PAVPVESKPDKPSGK;S(0.98)LT(0.02)PAVPVESKPDKPSGK 141.1 2.6734999999999998e-17 42802200.0 7065.5 8901.7 9017.7 8278.4 12151.0 9944.0 8838.4 8438.4 12611.099999999999 12238.5 11642.1 True False 8257.98366510996 9354.758507765153 10296.545458138668 10306.608371631499 10363.603996332375 10996.267479707018 10444.222873897317 9634.569041516168 9754.705985788487 9473.81434999261 8751.045264385919 0.943656833626199 1.0689875580733381 1.1766074962544717 1.1777574061439549 1.1842704137880622 1.256566175524022 1.193482899283142 1.1009620851495217 1.114690381672137 1.0825923148344507 1.0 13.095239633913495 -10.062088912666932 0.731271653048022 1.0057148758263212 1.1439376192405004 0.1472832803312718 0.0809692450751071 0.6241273123254876 0.6621127393214761 0.04326260568756556 0.01741080767931561 8.667844017040936e-11 10.062088912666932 0.13822274341417917 S(ph)LTPAVPVESKPDKPSGK ddPTM_A549_PD325901_60min_R1 2 SLTPAVPVESKPDKPSGK 18 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;H0YA91;H0Y944;E7EQK6;P20810-5;F8W7E0;E9PCH5;P20810-3;P20810-2;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 S(0.858)LT(0.142)PAVPVESKPDKPSGK;S(0.87)LT(0.13)PAVPVESKPDKPSGK 156.29 2.9499e-23 61360000.0 8104.5 7377.0 9042.0 7589.3 10670.4 8596.1 8945.5 10185.2 10129.2 8256.9 9940.3 True False 8927.26287378244 7998.6856795837475 9655.64449396305 8058.073824449139 9920.947914881619 8526.096211627868 9285.925897665426 9982.048195865169 9703.504949241846 7735.557924868626 8717.706116753418 1.024038061644026 0.917521831139974 1.1075900431430157 0.9243341902709226 1.1380227530056157 0.9780206051271538 1.0651799651539091 1.1450315096860146 1.1130800716709124 0.8873386899338888 1.0 13.089732854372713 -6.758962511362647 24.99999980631435 1.0615853412654306 0.9961117487616972 0.065017087646423 0.0858878696757262 95.43907026294612 963285.1032484157 0.010096770496846602 0.020273638033425082 1.741957234004755e-07 6.758962511362647 -0.06547359250373341 S(ph)LTRS(ph)PPAIR ddPTM_A549_MK2206_60min_R1 1 SLTRSPPAIR 10 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.982)LT(0.219)RS(0.8)PPAIR 58.486999999999995 0.0032294000000000003 4587300.0 425.76 634.04 474.31 263.05 591.29 470.43 442.23 449.76 523.33 526.62 675.26 True False 497.61787916739286 666.3099277961978 541.5742901460181 327.4972618087631 504.31202427712645 520.2105903538389 522.5774666821608 513.5148573322332 404.7965905862843 407.6561762465259 507.5743057720895 0.9803842974487222 1.3127337617743473 1.0669852354370264 0.6452203314558944 0.9935728001637107 1.0248954378463424 1.0295585508160219 1.0117038066990158 0.7975119819560876 0.8031458086248583 1.0 8.987475229258285 -6.008748038965061 24.814663518225434 0.917965594994149 1.1573841823451152 0.3240187213659411 0.13573537443192785 310.2306645611647 880009.8579617798 0.01847797176142088 0.053645055691378805 9.80058412880346e-07 6.008748038965061 0.23941858735096622 S(ph)LTRS(ph)PPAIR ddPTM_A549_PD325901_60min_R1 1 SLTRSPPAIR 10 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.85)LT(0.197)RS(0.954)PPAIR 58.486999999999995 0.0032294000000000003 5071100.0 686.71 629.33 930.92 556.18 875.98 654.87 620.22 677.41 815.8 909.25 876.94 True False 756.4242936708167 682.3658477338272 994.0978292767179 590.5339754235727 814.454186766944 649.5369558414563 643.8228114974066 663.8985261321357 781.5147630209191 851.8397998264246 769.0819393806767 0.9835418762790701 0.887247265594769 1.2925772643643683 0.7678427293444383 1.0589953359492545 0.8445614473335741 0.837131622172615 0.8632351016677849 1.0161657984716872 1.1076060380671413 1.0 9.586993503489252 -4.076696740648595 15.676170501857014 0.9771760753139536 0.9625436854249273 0.0 0.14376597288611703 0.0 0.0 0.01667372971908137 0.0 8.381143166961572e-05 4.076696740648595 -0.014632389889026265 S(ph)LVGGLLQSK ddPTM_A549_MK2206_60min_R1 1 SLVGGLLQSK 10 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 S(1)LVGGLLQSK 63.091 0.0067107 1708100.0 1689.4 2169.3 1882.8 1602.8 2732.9 1940.4 1914.2 1958.6 3156.8 2511.3 2534.7 True False 1974.5294181355544 2279.708104170546 2149.809351451419 1995.4860719524254 2330.89403025074 2145.731840066725 2261.9853621938646 2236.2375479609364 2441.7898403737267 1943.9955858264022 1905.2640358388082 1.0363547419117958 1.1965313265186814 1.1283524545745953 1.047354085531718 1.2233968554518715 1.1262123252759815 1.1872293391598119 1.1737152992427184 1.2816018118447865 1.020328704714432 1.0 10.895775228207164 -6.749616920846983 24.994795695232323 1.1478394478412144 1.110761579016923 0.04924159533352401 0.08614386951677215 887.2460934865609 1875785.0422203718 0.015468902576700387 0.03201485577013337 1.7798486731321085e-07 6.749616920846983 -0.03707786882429143 S(ph)LVGTPYWMAPELISR ddPTM_A549_MK2206_60min_R1 3 SLVGTPYWMAPELISR 16 0 O96013;O96013-4;O96013-2;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 S(0.861)LVGT(0.139)PYWMAPELISR;S(0.965)LVGT(0.033)PY(0.001)WMAPELISR;S(0.996)LVGT(0.004)PYWMAPELISR 266.45 2.4070999999999992e-91 114489000.0 16674.4 18307.9 15731.900000000001 14072.1 25711.9 20403.6 19609.2 20190.9 28184.9 24329.1 25732.9 True False 19488.63107006009 19239.693910636583 17962.919978807422 17519.765131720575 21929.713570347973 22562.695409186457 23171.937814403875 23053.02190703795 21801.065152036703 18833.139412706223 19342.710738089914 1.007543944276788 0.9946741266594826 0.9286661121098507 0.9057554222335771 1.1337456195921753 1.1664701868676404 1.1979674476945672 1.1918196068373004 1.127094617048983 0.9736556405002615 1.0 14.239502371590367 -6.765190451669662 24.999998113902524 1.0944994052812629 0.9595184995038837 0.4955028591407009 0.07316074694471163 80.33900610849113 535445.1677025225 0.012255550831258113 0.023811358846191986 1.7171551959341535e-07 6.765190451669662 -0.1349809057773792 S(ph)LVGTPYWMAPELISR ddPTM_A549_PD325901_60min_R1 2 SLVGTPYWMAPELISR 16 0 O96013;O96013-4;O96013-2;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 S(0.839)LVGT(0.139)PY(0.022)WMAPELISR;S(1)LVGTPYWMAPELISR 281.56 4.9108999999999984e-107 71657000.0 19997.1 22576.7 22181.7 20256.4 23833.1 24560.0 21827.9 21498.6 27922.0 25038.1 25994.5 True False 22027.190870913037 24479.317741935552 23687.083551397962 21507.591822377748 22159.14527573147 24359.991502842055 22658.5726791852 21069.793557674566 26748.53544137058 23457.190092971116 22797.341292712157 0.9662175333557286 1.073779500320991 1.039028334368545 0.943425443617554 0.9720056822071306 1.0685452829812854 0.9939129474904462 0.9242215259728619 1.173318199606089 1.0289441120254623 1.0 14.476577961506248 -8.755103158393712 24.999994277737184 1.0818447051527853 1.0011368747555387 0.19650060159203042 0.06066886171209412 181.07953419972554 714460.8940418676 0.012692348439137281 0.01422042329048463 1.7575061022285913e-09 8.755103158393712 -0.0807078303972466 S(ph)LYAS(ph)SPGGVYATR ddPTM_A549_MK2206_60min_R1 1 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(0.99)LY(0.01)AS(0.535)S(0.433)PGGVYAT(0.031)R 59.248000000000005 0.009835 2804100.0 1072.7 1150.9 936.72 1057.6 1953.3 1321.8 1287.7 1246.4 2157.3 1711.0 2078.2 True False 1253.7455350029663 1209.4758941086436 1069.5609813530773 1316.7120474774679 1665.972157520864 1461.6719986601713 1521.658421741217 1423.081016939913 1668.6749945002027 1324.4839116588917 1562.1255845978671 0.8025894635902234 0.7742501025741763 0.6846830958398334 0.8428976904673287 1.0664777364553117 0.935694295690346 0.9740948082179529 0.9109901476367229 1.0682079667300015 0.8478728757264732 1.0 10.609294725973932 -6.601625275075549 4.410234986242907 1.0133567186794221 0.7563166719606772 0.6037007321027117 0.07364204560429362 0.06813020379037596 2.4976393354799886 0.008478276458195988 0.01827239023782271 2.502503680753293e-07 6.601625275075549 -0.2570400467187449 S(ph)LYASS(ph)PGGVYATR ddPTM_A549_MK2206_60min_R1 1 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(0.833)LY(0.165)AS(0.187)S(0.787)PGGVY(0.002)AT(0.026)R 76.358 0.00091385 4159800.0 1697.8 1549.1 1466.3 1311.9 2749.3 1875.3 1831.0 1833.0 2701.7 2214.5 2108.6 True False 1984.3471327752727 1627.942573258927 1674.2433885878563 1633.3155588934292 2344.8816119756884 2073.743001276607 2163.6689991521075 2092.833363327071 2089.7692637283635 1714.2429119629548 1584.9764256005492 1.2519726481252877 1.0271083827900456 1.0563206881474492 1.0304983295095789 1.4794425797766741 1.3083746658824051 1.3651111550963864 1.3204192374874562 1.3184860228672157 1.081557355853685 1.0 10.630245667031748 -4.890490100293662 19.204297509697444 1.1868760755184486 9.507721816980823 0.004161074683823873 0.15963563335656977 2143.6479198870047 376193.60330938024 0.02462803805726598 562.0727224637383 1.2867965851157337e-05 4.890490100293662 8.320845741462374 S(ph)LYASSPGGVYATR ddPTM_A549_MK2206_60min_R1 1 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.775)LYAS(0.197)S(0.028)PGGVYATR 148.62 2.7408000000000003e-13 130470000.0 11631.0 13398.0 10617.0 9871.9 16206.0 13584.0 10471.0 11977.0 19826.0 20012.0 18315.0 True False 13594.028449351634 14079.900972515075 12122.650246632535 12290.51594316643 13822.118867958383 15021.449863670574 12373.445161180618 13674.776428024174 15335.442655616287 15491.275301062391 13766.88003171491 0.9874443895810033 1.0227372462082225 0.8805662734552385 0.8927597186038256 1.0040124440771052 1.0911295681422004 0.898783539384071 0.993309769281162 1.1139374077705233 1.1252567949582601 1.0 13.748914020156667 -8.540166944126325 22.2969612962727 1.0537943447596467 0.9684142195587206 0.3278328782473685 0.06711362622956968 74.1877786684174 95680.48536735857 0.012007056875904849 0.013617564641070012 2.8829230856545437e-09 8.540166944126325 -0.08538012520092608 S(ph)LYASSPGGVYATR ddPTM_A549_PD325901_60min_R1 4 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.651)LYAS(0.349)SPGGVYATR;S(0.801)LYAS(0.197)S(0.002)PGGVYATR;S(0.994)LYAS(0.006)SPGGVYATR;S(0.966)LYAS(0.034)SPGGVYATR 222.55 7.095699999999999e-47 464010000.0 51019.7 52516.0 54578.0 52941.0 60434.0 58116.0 54470.0 56038.0 60708.0 64233.0 63587.0 True False 56199.18238528194 56941.707624918025 58281.99128417557 56211.04533226538 56189.32432598177 57642.7225642984 56542.8856571277 54920.278129039434 58156.653877756806 60177.31741792766 55766.20211120386 1.0077642058753558 1.0210791746472188 1.0451131523705874 1.0079769323393128 1.0075874310740072 1.0336497803697042 1.0139274958042697 0.984830884117273 1.0428656009564023 1.0791001563622276 1.0 15.76710340089729 -11.240889827177853 1.7252787889193348 0.9999717324466657 1.0219972967462134 0.0 0.029014580424116254 0.5442905041313116 2.919133017067641 0.013302705633483632 0.002714032065109285 5.742621238658506e-12 11.240889827177853 0.022025564299547717 S(ph)LYESDR ddPTM_A549_MK2206_60min_R1 1 SLYESDR 7 0 E9PD43;A0A0A0MSN9;A0A0G2JI50 E9PD43 NELFE 1 S(0.993)LY(0.006)ESDR 64.84100000000001 0.025474 2640100.0 1202.5 1333.4 1173.9 1003.8 1378.5 1020.4 1049.0 1138.2 1666.9 1700.3 1569.9 True False 1405.4526016976465 1401.2643645881185 1340.3766718020092 1249.7310450622938 1175.7244760879084 1128.3780507132985 1239.5897215240643 1299.5433355913092 1289.349811492323 1316.201049090364 1180.0505029641954 1.1910105526562282 1.1874613510762895 1.1358638197560926 1.0590487796268602 0.9963340324287644 0.9562116603305539 1.0504548054598604 1.1012607785234252 1.0926225684863284 1.1153768807217734 1.0 10.204632889009254 -6.12529680208688 2.3950619441256937 1.039824097421117 1.1888001832885173 0.6091338498607128 0.0457434641289158 0.15653962263223853 1.7273161823863419 0.007061660486862565 0.023852222923930362 7.49381897665385e-07 6.12529680208688 0.1489760858674003 S(ph)LYESDR ddPTM_A549_PD325901_60min_R1 1 SLYESDR 7 0 E9PD43;A0A0A0MSN9;A0A0G2JI50 E9PD43 NELFE 1 S(0.998)LY(0.001)ES(0.001)DR 48.091 0.057892 2916700.0 601.16 1041.5 741.16 997.11 911.97 860.53 691.82 1004.5 988.24 919.98 1049.6 True False 662.1893206493987 1129.2708601445677 791.4595745571395 1058.6992200988861 847.9163733257037 853.5221289878118 718.1475886784298 984.464459484994 946.707709497173 861.8923057952309 920.5058539625957 0.7193754583947561 1.226793784399393 0.8598093875775613 1.1501276342148128 0.921141750131834 0.9272316143494013 0.7801662374953363 1.0694820193126087 1.0284646267286444 0.9363246329015236 1.0 9.846283086206997 S(ph)LYLETR ddPTM_A549_MK2206_60min_R1 1 SLYLETR 7 0 Q9P0U3;Q9P0U3-2;F8VRZ8 Q9P0U3 SENP1 Sentrin-specific protease 1 1 S(0.9)LY(0.088)LET(0.013)R 57.55 0.034901999999999996 1593900.0 580.33 784.36 467.0 573.04 978.36 789.45 739.11 752.19 954.37 1167.2 950.15 True False 678.275516293718 824.2805737275655 533.2276222263718 713.4348257247433 834.4445400256554 872.9890750055022 873.3967198051963 858.8152359852643 738.2067188157226 903.5287093443947 714.2015321940447 0.9496976493596128 1.154128822988317 0.7466066623916129 0.9989264844238767 1.1683600530262392 1.2223287624764094 1.2228995324640373 1.202483048932929 1.0336112225185703 1.2650892900897766 1.0 9.48018741875104 -4.9700934036680255 12.800133251348774 1.0517842854059596 0.7032686476966039 0.0 0.15062853469051246 364974.5756739709 5060731.397050608 0.01939324806046313 2565116.6505900426 1.071288878474428e-05 4.9700934036680255 -0.3485156377093557 S(ph)LYYYIQQDTK ddPTM_A549_MK2206_60min_R1 2 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 1 S(0.958)LY(0.019)Y(0.001)Y(0.022)IQQDTK;S(0.999)LY(0.001)YYIQQDTK 114.82 2.2106999999999997e-05 1638960.0 1726.18 1625.38 2184.74 1845.7800000000002 2759.0 1639.4 1313.15 2135.6 2643.4 2539.6 3037.8 True False 2017.5169829508902 1708.1048994407058 2494.568983689173 2297.9961828602122 2353.1547548252006 1812.8802198543547 1551.732357311081 2438.3278400007025 2044.674120642394 1965.9025961711993 2283.4304209851794 0.8835465116035541 0.7480433315343802 1.0924655118735338 1.0063788945531997 1.0305349062529958 0.793928382136642 0.6795619183533478 1.067835401329502 0.8954396428511385 0.8609426317982645 1.0 11.15698711430435 -10.82259365987626 0.7887024189912092 1.007399177345008 0.9103728073082579 0.0 0.13288481877739883 2.0871910133643805 1.9966568176628803 0.13200996808707832 0.0240085401473463 1.504549013020612e-11 10.82259365987626 -0.09702637003675008 S(ph)LYYYIQQDTK ddPTM_A549_PD325901_60min_R1 1 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 1 S(0.771)LY(0.21)Y(0.015)Y(0.003)IQQDTK 88.021 0.00030594 1448400.0 1713.2 1461.6 1637.3 1496.7 2021.4 1582.0 1843.8 1929.6 1897.5 1757.4 2438.4 True False 1887.122802808819 1584.7741614856468 1748.4170238847282 1589.1477597476746 1879.423837451427 1569.116716510428 1913.966817966074 1891.1126142580838 1817.7546737339962 1646.4374640802398 2138.4922582911513 0.8824548209105049 0.7410707966518545 0.8175933380660781 0.7431159750924454 0.8788546370297626 0.733749075044253 0.8950075973132147 0.8843205332757453 0.8500169531530344 0.7699057397551171 1.0 11.062378269082235 -11.12190984785126 0.24998694235663657 1.1268073967648675 0.7858317315735446 0.0 0.0879181512602902 2.974177717199309 0.2047944447606986 0.30740173482384914 0.03611824264933261 7.552489882404923e-12 11.12190984785126 -0.34097566519132294 S(ph)MDAPSR ddPTM_A549_PD325901_60min_R1 2 SMDAPSR 7 0 O15042-2;O15042;E7ET15;E7EW00;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 S(1)MDAPSR;S(1)MDAPSR 52.255 0.016954 5002600.0 1397.38 1334.02 1227.95 1402.6 1607.72 1206.3200000000002 1136.88 1697.94 1509.25 1758.2 1481.06 True False 1539.2409889032147 1446.4425471435961 1311.286071263209 1489.235416464281 1494.7992935329019 1196.4961298741218 1180.1445905246064 1664.0732546918382 1445.8214710582524 1647.1869519437114 1298.8990092128827 1.185035155147263 1.113591231407685 1.0095365859566192 1.1465367252583707 1.1508202584885583 0.9211617850098941 0.9085730161883486 1.2811413688738178 1.1131130756150187 1.2681408949121358 1.0 10.343073548725998 -10.80090718719528 1.1502529278335303 1.001940222599042 1.089819920118688 0.0 0.13162557381419474 0.9877529878745632 2.39854414383184 0.06552598362665085 0.017937149957610758 1.5815860029211248e-11 10.80090718719528 0.08787969751964608 S(ph)MDAPSRR ddPTM_A549_PD325901_60min_R1 2 SMDAPSRR 8 1 O15042-2;O15042;E7ET15;E7EW00;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 S(1)MDAPSRR;S(1)MDAPSRR 43.77 0.017486 27365000.0 3194.3 2936.5 2358.8 2129.05 2795.1000000000004 2716.8 2632.6000000000004 2468.8 2516.7 2903.3 3991.6 True False 3518.582984480625 3183.9691606476467 2518.8823526166834 2260.5565830766263 2598.7818185715246 2694.67528155217 2732.7850336139954 2419.5578472638667 2410.9318510600006 2719.985142519721 3500.6585048371717 1.0051203165400697 0.9095343508223018 0.7195452938743152 0.645751814966531 0.7423694184909942 0.7697623969400892 0.7806488493058843 0.6911722020072932 0.6887080952708187 0.7769924254997382 1.0 11.773410615949304 -10.87111646795243 1.1169998867906465 1.000117359658319 0.7626596143057711 0.006941246275705915 0.11762501653289024 0.4010115801979716 0.8876464584241816 0.0736796370837421 0.017785887938587604 1.3454994731565709e-11 10.87111646795243 -0.23745774535254793 S(ph)MDELNHDFQALALEGR ddPTM_A549_MK2206_60min_R1 5 SMDELNHDFQALALEGR 17 0 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR 101.48 4.0438000000000004e-09 10436100.0 1391.77 1031.6000000000001 1271.339 1251.8200000000002 1772.19 1517.5299999999997 1561.98 1786.1299999999999 2687.8199999999997 1889.52 2086.92 True False 1626.6667504904246 1084.1040336801436 1451.63398718127 1558.5159561963353 1511.503198605898 1678.1140173451122 1845.7715474033905 2039.3193972937136 2079.0330615665566 1462.6761196713665 1568.68016793811 1.0369652040852488 0.6910930958635766 0.9253855673392705 0.9935205327704661 0.9635509069975903 1.0697617345101285 1.176639818064056 1.3000224258423672 1.3253390359994544 0.9324246902374776 1.0 10.615335521502844 -7.144698573215156 1.3170242964691656 1.1715820440307925 0.8827206900684751 0.3881957278283631 0.13436169613981633 0.314323004896823 1.0705666960118443 0.023393939185518894 0.050670108537464224 7.166406298268088e-08 7.144698573215156 -0.2888613539623174 S(ph)MDELNHDFQALALEGR ddPTM_A549_PD325901_60min_R1 4 SMDELNHDFQALALEGR 17 0 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR 137.64 4.1465e-13 35560400.0 1823.3600000000001 2229.01 2172.5099999999998 2696.7 2818.1899999999996 2437.71 2555.0499999999997 2484.64 2141.0800000000004 2889.87 2816.33 True False 2008.4661649133118 2416.856495411277 2319.9495929639083 2863.2690343499394 2620.2500566277013 2417.8580979801745 2652.283825927009 2435.0819060376266 2051.0978534062647 2707.4031150116994 2469.9392641868085 0.8131641915391673 0.9785084720320003 0.9392739435346876 1.1592467377098152 1.0608560682525043 0.9789139891163352 1.073825524531768 0.9858873622300757 0.8304244088696484 1.0961415749237349 1.0 11.270259851033249 -8.543145018198222 24.909813128997968 0.9193033229697163 1.0067099690701653 0.0 0.10443026055485306 343.00313882766784 421592.37837310636 0.016952475681558662 0.01922329181278693 2.8632217325926744e-09 8.543145018198222 0.08740664610044901 S(ph)MDLGIADETK ddPTM_A549_MK2206_60min_R1 2 SMDLGIADETK 11 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(1)MDLGIADETK;S(1)MDLGIADETK 144.88 8.169e-12 19166800.0 4766.9 5415.299999999999 5369.9 4742.7 7307.1 5776.9 5324.6 5765.9 8227.2 6868.9 6709.0 True False 5571.436180484419 5690.91563938356 6131.4325665811475 5904.661712907897 6232.235269656839 6388.207723604133 6292.010897261232 6583.233982328182 6363.752336138726 5317.210719341765 5042.9701410196785 1.1047926171852935 1.1284848968455063 1.215837570940165 1.1708698540328828 1.2358263276166639 1.2667550163825578 1.2476795859015337 1.3054279121702403 1.26190561478359 1.0543807658291302 1.0 12.300057967912833 -10.760000032635698 1.0203632320346063 1.0005429933719867 1.2186310712579207 0.5945229993919837 0.059334742853755146 0.2793842072620469 0.5186260204589056 0.04343429663000183 0.0111729957064168 1.737800698159778e-11 10.760000032635698 0.21808807788593398 S(ph)MDLGIADETK ddPTM_A549_PD325901_60min_R1 2 SMDLGIADETK 11 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(1)MDLGIADETK;S(1)MDLGIADETK 152.0 5.3684e-12 52487000.0 8989.9 9110.5 8669.2 8763.900000000001 11184.099999999999 9071.0 9075.3 9910.599999999999 10477.599999999999 8908.7 8948.7 True False 9902.548029985399 9878.27380830253 9257.544044134542 9305.22619873899 10398.567399050404 8997.128783480463 9420.66550769471 9712.9253082847 10037.26290883548 8346.203161631742 7848.066630483116 1.2617818497516773 1.2586888304354824 1.179595495300307 1.185671151490488 1.3249845966726053 1.1464134043579868 1.200380418675776 1.2376201382590437 1.2789472084563076 1.0634725155382583 1.0 12.938121574825189 -10.810342226144925 0.9376394813855983 0.9927935567852996 1.2310180800180164 0.6847569884596462 0.05143379366215465 0.23620657008234558 0.3501632105473987 0.03965310701802382 0.008739863201074243 1.5475966246956793e-11 10.810342226144925 0.2382245232327168 S(ph)MDLGIADETKLNTVDDQK ddPTM_A549_MK2206_60min_R1 2 SMDLGIADETKLNTVDDQK 19 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(1)MDLGIADETKLNTVDDQK;S(1)MDLGIADETKLNTVDDQK 143.71 3.5892e-21 9978100.0 3824.1 5011.0 4978.299999999999 3964.8999999999996 6786.5 4866.4 5193.5 5004.1 8048.5 6762.2 7909.6 True False 4469.514589731369 5266.038496288478 5684.297798136078 4936.300677991127 5788.214840022188 5381.35921794512 6137.091724247119 5713.446499413522 6225.527600813463 5234.6143234481315 5945.428026145364 0.7517565716171182 0.8857290800814961 0.9560788177300354 0.8302683433864574 0.9735572972321215 0.9051256182532663 1.032237157233912 0.9609815263574482 1.0471117593950083 0.8804436451721578 1.0 12.537564961574763 -3.1496857609293967 0.28431959876884444 1.026751340646581 6.564351816499138e-17 0.39854801615077473 0.06586943284880975 10.088610223391733 0.22509430162058874 0.01857773619236978 4.618156398801656 0.0007084582125575614 3.1496857609293967 -1.026751340646581 S(ph)MDLGIADETKLNTVDDQK ddPTM_A549_PD325901_60min_R1 4 SMDLGIADETKLNTVDDQK 19 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(1)MDLGIADETKLNTVDDQK;S(1)MDLGIADETKLNTVDDQK;S(1)MDLGIADETKLNTVDDQK;S(1)MDLGIADETKLNTVDDQK 227.3 2.0994999999999997e-75 37536000.0 14836.300000000001 16698.7 17219.4 18160.5 18828.7 22667.1 19061.2 20842.899999999998 21307.4 22041.899999999998 21005.0 True False 16342.470254093207 18105.958053092745 18388.012032663955 19282.23283951202 17506.237067488702 22482.506652853037 19786.584396688864 20427.17200856125 20411.92407647945 20650.170672305798 18421.518161665692 0.8871402514533854 0.9828700270084356 0.9981811418197084 1.0467233303082173 0.9503145676624174 1.2204480898668857 1.074101722943976 1.108875600224374 1.1080478762578698 1.120980936048899 1.0 14.169104341850154 -5.240268502548403 0.7953119343742704 1.065023244178897 0.7887295588905856 0.44687465823466455 0.06630174428218277 2.101531175027123 0.9230503717504689 0.01094998980762627 0.5162482560157744 5.750842815692292e-06 5.240268502548403 -0.27629368528831133 S(ph)MDLVADETK ddPTM_A549_MK2206_60min_R1 1 SMDLVADETK 10 0 F5GZI3 F5GZI3 PARD3 1 S(1)MDLVADETK 72.29 0.0022083000000000003 1229000.0 966.67 1102.3 1106.6 499.0 1239.5 689.99 1048.8 1073.8 1424.3 1375.5 1510.9 True False 1129.8202631875797 1158.4023616960278 1263.5325198194923 621.255022400961 1057.171191955722 763.0042838217066 1239.3533841129054 1226.0144383745815 1101.6983241397293 1064.7735946737607 1135.7018312813582 0.9948212040063873 1.0199881076083657 1.1125565575551717 0.5470229996019542 0.9308527668419502 0.6718350387450246 1.0912665190603787 1.0795214065925454 0.9700594766997387 0.937546779749776 1.0 10.149368402079464 S(ph)MEAGSSTEGKYEDEAK ddPTM_A549_PD325901_60min_R1 1 SMEAGSSTEGKYEDEAK 17 1 Q9UGH3-2;Q9UGH3 Q9UGH3-2 SLC23A2 Solute carrier family 23 member 2 1 S(0.259)MEAGS(0.22)S(0.259)T(0.259)EGKY(0.004)EDEAK 41.912 0.018974 10873000.0 5054.8 5714.8 5057.4 4794.2 6593.4 5378.5 4998.5 5687.5 6235.7 6143.2 6202.6 True False 5567.9595748529155 6196.4062520923435 5400.6255766167615 5090.326845581814 6130.302329995171 5334.69927923599 5188.720652784155 5574.0583507425645 5973.635214230872 5755.317303594932 5439.719521520952 1.0235747546954603 1.1391039974722486 0.9928132425303318 0.935770093557793 1.1269519146606903 0.980693813004609 0.9538581230624521 1.024695911009774 1.098151327581801 1.058017289462332 1.0 12.409316550964428 -11.369223738144559 2.058670829752324 0.9996565159194493 1.0421338209647182 0.0 0.06665562466168595 0.948551972768934 7.266329738655969 0.05233072185913474 0.009808190187590441 4.273426726936116e-12 11.369223738144559 0.04247730504526892 S(ph)MESSPRK ddPTM_A549_MK2206_60min_R1 1 SMESSPRK 8 1 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 S(0.333)MES(0.333)S(0.333)PRK 40.431999999999995 0.040376 1638100.0 423.56 495.82 503.96 128.57 251.05 315.76 117.3 158.69 315.4 525.12 734.93 True False 495.04657295222927 521.0551201815518 575.4291059897267 160.06965577172662 214.120877563924 349.17351361547554 138.61189164420662 181.18479346774294 243.96240359030435 406.495027288321 552.4265979638676 0.8961309516537953 0.943211500137856 1.0416390306162695 0.2897573295017128 0.38760059409364095 0.6320722334921206 0.2509145869425946 0.32797985132423624 0.44161958256445344 0.7358353648911534 1.0 9.109638973213517 -6.231784500162388 24.558830934169514 0.6109409280051848 0.9586156600776098 0.38817781527893613 0.2276045649611715 709.2675293807333 587382.0676428269 0.0422295202544699 0.11170894923383619 5.864290823781035e-07 6.231784500162388 0.34767473207242494 S(ph)MGETESGDAFLDLK ddPTM_A549_MK2206_60min_R1 5 SMGETESGDAFLDLK 15 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B1AKL5;B1AKL6 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.91)MGET(0.079)ES(0.011)GDAFLDLK;S(0.481)MGET(0.481)ES(0.038)GDAFLDLK;S(0.89)MGET(0.101)ES(0.01)GDAFLDLK;S(0.99)MGET(0.009)ES(0.001)GDAFLDLK;S(0.881)MGET(0.109)ES(0.01)GDAFLDLK 80.69 0.00013492 8854600.0 4083.6299999999997 5221.0 4273.01 4279.67 5841.400000000001 4317.67 4444.0599999999995 4580.9800000000005 7705.9 6368.200000000001 6828.6 True False 4772.846908832066 5486.72659930596 4878.9870707698265 5328.189342121685 4982.137798055789 4774.562973562611 5251.488177155608 5230.3479436628695 5960.525953793678 4929.619197093017 5132.8701602276 0.9298592716828884 1.0689392928385841 0.9505377923982953 1.038052624710348 0.9706339031640093 0.9301936001729876 1.0231094910304042 1.0189908921115096 1.1612461971041517 0.9604020836705578 1.0 12.32555005162691 -8.535366426712194 24.67381959257704 1.076879545007619 0.9905155465193486 0.04504796652943677 0.06422902196599159 200.4543367241238 396066.51469357766 0.011378520464712414 0.012906193961490734 2.9149665352767576e-09 8.535366426712194 -0.08636399848827037 S(ph)MGETESGDAFLDLK ddPTM_A549_PD325901_60min_R1 3 SMGETESGDAFLDLK 15 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B1AKL5;B1AKL6 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(1)MGETESGDAFLDLK;S(1)MGETESGDAFLDLK;S(1)MGETESGDAFLDLK 207.72 9.298e-41 15554200.0 6529.3 7569.0 7354.999999999999 7144.799999999999 8588.5 7532.200000000001 7902.499999999999 7698.400000000001 7219.799999999999 7659.6 8214.0 True False 7192.149729383384 8206.866193407806 7854.154529207947 7586.118068981887 7985.273388716521 7470.860260492947 8203.23396191393 7544.849372722028 6916.376913530804 7175.971548804488 7203.73007283609 0.99839245178045 1.1392523193441624 1.0902899539260202 1.0530819439761785 1.108491477051241 1.0370822039354521 1.1387481039644698 1.0473531484990304 0.9601105043637267 0.9961466457306231 1.0 12.814528408455331 -8.599131952348687 4.903778860434166 0.9814448364459143 1.0824592395917383 0.5098558969057327 0.040703029660661756 0.10314822827911771 4.583655449182371 0.006420051407607596 0.007303944737575447 2.5169120943696293e-09 8.599131952348687 0.101014403145824 S(ph)MGGAAIAPPTSLVEKDKELPR ddPTM_A549_PD325901_60min_R1 3 SMGGAAIAPPTSLVEKDKELPR 22 2 Q96I25;Q5W012;Q5W011;Q5W010;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 S(1)MGGAAIAPPTSLVEKDKELPR;S(1)MGGAAIAPPTSLVEKDKELPR;S(1)MGGAAIAPPTSLVEKDKELPR 72.771 0.00010765 9389000.0 4788.200000000001 5437.6 5596.4 5260.4 7371.400000000001 7285.400000000001 5931.5 6193.7 7209.500000000001 6236.6 5709.5 True False 5274.294539113464 5895.845635258857 5976.2053578870655 5585.3229607647945 6853.658293949461 7226.070117866675 6157.226478341338 6070.161794636349 6906.509786711597 5842.820011655184 5007.267695502514 1.0533278546003826 1.1774576463236541 1.1935062635566387 1.1154432517721162 1.3687421385729708 1.4431163974630459 1.2296579397725647 1.2122702766797386 1.379297095083406 1.166867914192636 1.0 12.289807870631046 -3.8538404725634154 11.57760630176371 1.2051192195818086 0.6753769039112817 0.0 0.1314000874128654 0.0 0.0 0.021463051640580204 0.0 0.00014001015211153773 3.8538404725634154 -0.5297423156705269 S(ph)MGYDDLDYGMMSDYGTAR ddPTM_A549_MK2206_60min_R1 10 SMGYDDLDYGMMSDYGTAR 19 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 S(0.889)MGY(0.071)DDLDY(0.035)GMMS(0.005)DYGTAR;S(0.931)MGY(0.004)DDLDY(0.051)GMMS(0.014)DYGTAR;S(0.821)MGYDDLDY(0.012)GMMS(0.166)DYGT(0.001)AR;S(0.994)MGYDDLDY(0.003)GMMS(0.003)DYGTAR;S(0.986)MGY(0.003)DDLDY(0.007)GMMS(0.004)DYGTAR;S(0.851)MGY(0.148)DDLDYGMMSDYGTAR;S(0.774)MGY(0.038)DDLDY(0.176)GMMS(0.012)DYGTAR;S(0.999)MGY(0.001)DDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR 247.4 3.698199999999999e-86 91100100.0 11807.26 12758.869999999999 11681.539999999999 11411.75 22688.499999999996 17376.93 15008.090000000002 16989.140000000003 26497.600000000002 17521.59 19072.199999999997 True False 13800.03682820836 13408.241985460028 13338.158026000541 14207.629262292929 19351.051705274214 19215.745198727407 17734.865685136414 19397.402622059162 20495.935907972267 13563.450649727247 14336.046374058042 0.9626110622228717 0.9352817112619745 0.9303930580286598 0.9910423621398511 1.3498178786789594 1.3403796763310896 1.237082053335761 1.3530510515897853 1.4296784045747037 0.9461081734690218 1.0 13.807359588876476 -6.660906279142176 6.1003845696596946 1.2402214610803515 0.9458904191576336 0.484427226652815 0.1401746798437975 0.16459978195009126 8.559211419205974 0.0237995750305005 0.049872495374885945 2.1832009963321875e-07 6.660906279142176 -0.29433104192271786 S(ph)MGYDDLDYGMMSDYGTAR ddPTM_A549_PD325901_60min_R1 5 SMGYDDLDYGMMSDYGTAR 19 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 S(1)MGYDDLDYGMMSDYGTAR;S(0.904)MGY(0.034)DDLDY(0.041)GMMS(0.02)DYGTAR;S(0.99)MGY(0.01)DDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR 194.51 2.2796e-54 113971500.0 16430.0 15609.599999999999 16739.2 14463.2 18017.0 13100.3 14619.900000000001 14464.400000000001 17765.8 18032.3 19305.0 True False 18097.961504873278 16925.075773895962 17875.222772986766 15356.559015689556 16751.548075275725 12993.615500190615 15176.268294816255 14175.896194897714 17019.165208233702 16893.737500588428 16930.607384477807 1.0689493350052943 0.9996732774875569 1.0557933550201508 0.9070294211516972 0.9894239287973657 0.7674630451889944 0.8963806170787497 0.8372940127295346 1.0052306347755182 0.9978222940824213 1.0 14.047346110305496 -6.243985537290427 24.230885624034258 0.960312250687056 1.0372921242748108 0.22388169266400504 0.07854214013574154 918.3035653128397 1274861.8860853862 0.012378765175031295 0.032651479302712304 5.701832599905361e-07 6.243985537290427 0.07697987358775482 S(ph)MPAETIK ddPTM_A549_MK2206_60min_R1 4 SMPAETIK 8 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK 169.76 6.3548000000000005e-06 203712000.0 33079.200000000004 36444.9 33958.3 31142.3 47851.0 35986.799999999996 33254.8 36663.4 52065.0 49598.7 51326.2 True False 38662.16025120736 38299.78974124608 38774.0975671302 38772.164898030984 40812.181287836414 39794.899289895475 39296.76670289653 41860.549226953444 40272.36063072037 38394.3192222068 38580.488008943794 1.002116931290362 0.9927243463682305 1.005018328387695 1.0049682339176933 1.057845128303594 1.0314773436943088 1.018565827725836 1.0850186554729235 1.043853064310238 0.9951745352030323 1.0 15.235583771864157 -6.551062562241161 24.892076900387615 1.0289991015074307 1.0001907976158806 0.28121472898829336 0.024071353963483103 241.02804637623572 212876.41593058815 0.00375515335480042 0.0078170881739265 2.811495791525944e-07 6.551062562241161 -0.02880830389155009 S(ph)MPAETIK ddPTM_A549_PD325901_60min_R1 4 SMPAETIK 8 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK;S(1)MPAETIK 180.67 1.2336e-07 393573000.0 36714.6 38002.3 40451.9 40029.2 42792.7 39973.4 40963.3 43858.2 42746.7 42978.2 44806.1 True False 40441.83916413999 41204.88719008343 43197.209191035596 42501.71277109079 39787.08837880065 39647.86988353855 42522.18079747787 42983.41379490768 40950.20485465349 40264.549117294504 39295.23374926968 1.0291792491218255 1.0485975844551183 1.0992989497571937 1.0815996932931007 1.0125169030083732 1.008974017981899 1.0821205713852806 1.0938582034953932 1.0421163318672095 1.0246675048228422 1.0 15.262066713323486 -9.97928402899576 0.8847621710954943 1.0041855862287925 1.0562686299201318 0.21823049913006132 0.030448499567698472 0.4858048616410493 0.7721946807881447 0.012748548068041205 0.006337341781780834 1.0488562513309746e-10 9.97928402899576 0.052083043691339315 S(ph)MPAETIKELR ddPTM_A549_PD325901_60min_R1 1 SMPAETIKELR 11 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(1)MPAETIKELR 69.345 0.0010083 2928700.0 922.4 1108.1 1531.6 1632.0 1030.8 2371.3 2140.7 1861.5 1861.3 1442.3 1845.9 True False 1016.0413689650094 1201.483475877288 1635.5435862589916 1732.8049334590792 958.4001640669486 2351.9889190020103 2222.1655099359878 1824.3709221815002 1783.0760338451064 1351.2329318555423 1618.8660021241951 0.6276253671593638 0.7421759888099209 1.0103020164194645 1.0703819409298725 0.5920194523878961 1.4528620132338612 1.3726679706783471 1.1269437493823775 1.1014352216338121 0.8346786763589586 1.0 10.660767859511077 -7.2473701310028416 24.936860339944836 1.107976402554859 0.8305763689034157 0.39078129398782546 0.20703141695422925 762.2853756166958 1351102.7075966427 0.030055857595040005 0.051890824734971204 5.6575691258469735e-08 7.2473701310028416 -0.2774000336514434 S(ph)MPVDER ddPTM_A549_MK2206_60min_R1 3 SMPVDER 7 0 P55042 P55042 RRAD GTP-binding protein RAD 1 S(1)MPVDER;S(1)MPVDER;S(1)MPVDER 58.981 0.011152 15139400.0 996.5799999999999 1194.94 1169.57 1103.27 1441.5 1112.46 1279.02 1239.47 1815.98 1653.2800000000002 1504.25 True False 1164.7783399582877 1255.757341998594 1335.4326126922867 1373.571199527672 1229.4572595435027 1230.179778808817 1511.401378096957 1415.1686682176783 1404.6634295241638 1279.8028997471733 1130.7032098120208 1.0301362283670636 1.1105985470823625 1.1810637850000463 1.2147937563173876 1.0873386127097842 1.0879776126339415 1.336691507533818 1.2515827813498026 1.242291891749108 1.131864567679029 1.0 10.143004580990599 -10.899007151538239 1.1867419530151981 1.00134113715504 1.1787631911123448 0.10632954184850407 0.09250209099580223 0.4265867152650664 1.0798322094217447 0.060590017361002224 0.014928752125270742 1.2618067562157621e-11 10.899007151538239 0.17742205395730481 S(ph)MPVDER ddPTM_A549_PD325901_60min_R1 2 SMPVDER 7 0 P55042 P55042 RRAD GTP-binding protein RAD 1 S(1)MPVDER;S(1)MPVDER 53.968 0.015475999999999998 8780600.0 631.12 636.56 541.26 775.34 750.8 528.39 457.39 607.9 367.03999999999996 537.37 654.71 True False 695.1908377940118 690.2051452075144 577.9931584607875 823.2309908750997 698.0663981193882 524.0869670271464 474.7962267434115 595.7749576116755 351.61458521598223 503.44036649186216 574.1848205486383 1.2107440198954602 1.2020609401481874 1.0066325994276726 1.4337386872897402 1.2157520943385094 0.9127496030396224 0.8269048740956612 1.0376013720502184 0.6123717880246496 0.8767914937403269 1.0 9.16537138098044 -7.338059731519963 3.699816374937231 0.83436707885414 1.2150403940264702 0.5874681175102978 0.138862055884987 0.14640471229157442 3.8762044897281824 0.025879762017326738 0.04282477912092117 4.59134860505264e-08 7.338059731519963 0.3806733151723303 S(ph)MPVDERDLQAALTPGALTAAAAGTGTQGPR ddPTM_A549_MK2206_60min_R1 3 SMPVDERDLQAALTPGALTAAAAGTGTQGPR 31 1 P55042 P55042 RRAD GTP-binding protein RAD 1 S(0.841)MPVDERDLQAALT(0.158)PGALT(0.002)AAAAGTGTQGPR;S(0.992)MPVDERDLQAALT(0.008)PGALTAAAAGTGTQGPR;S(0.992)MPVDERDLQAALT(0.008)PGALTAAAAGTGTQGPR 62.605 0.00030827 6896700.0 1662.29 1568.44 1559.13 1924.26 2453.7799999999997 1404.6799999999998 1762.78 1663.77 2652.79 2200.83 2589.0 True False 1942.8439129114183 1648.2668966511078 1780.2380784621064 2395.703786383313 2092.8322125027103 1553.3223052488802 2083.0543082060917 1899.6144925819317 2051.9373006351425 1703.6609744571813 1946.079847235049 0.9983372037235634 0.8469677639347286 0.9147816216233021 1.2310408484970852 1.07540922099171 0.7981801504474799 1.070384810348688 0.9761236134688233 1.0543952261519451 0.8754322063802821 1.0 10.926355189460857 -6.065178471605168 24.99972650453325 1.0258353569204361 0.9122017768530769 0.10221856408041863 0.11144859982235501 223.92304207277564 85887.03503834097 0.01353578997579907 0.035812372864664745 8.606400028874555e-07 6.065178471605168 -0.11363358006735924 S(ph)MPVDERDLQAALTPGALTAAAAGTGTQGPR ddPTM_A549_PD325901_60min_R1 4 SMPVDERDLQAALTPGALTAAAAGTGTQGPR 31 1 P55042 P55042 RRAD GTP-binding protein RAD 1 S(0.999)MPVDERDLQAALT(0.001)PGALTAAAAGTGTQGPR;S(0.988)MPVDERDLQAALT(0.012)PGALTAAAAGTGTQGPR;S(1)MPVDERDLQAALTPGALTAAAAGTGTQGPR;S(1)MPVDERDLQAALTPGALTAAAAGTGTQGPR 155.86 1.1145999999999998e-46 17835400.0 6157.31 5967.74 6414.139999999999 6902.47 8301.2 7284.65 9107.0 7518.57 8350.0 7409.200000000001 7394.6 True False 6782.395578427949 6470.662393585347 6849.442111757153 7328.8198952532475 7718.152349585332 7225.326225618013 9453.571868541618 7368.60622314594 7999.07853790718 6941.3818475380185 6485.111078231525 1.0458410806862375 0.997772022025239 1.0561796134454153 1.1300993625003257 1.190134179118803 1.1141407045241147 1.4577347642161875 1.1362343889343745 1.2334528185272826 1.0703566621762348 1.0 12.6629155701092 -6.198690623644671 3.028551439186722 1.1466369383232098 1.0227024246536645 0.21129025094544462 0.11121089429865681 0.4125299597352166 7.431657295450381 0.018333405459714756 0.053768559785005055 6.32862520188884e-07 6.198690623644671 -0.12393451366954533 S(ph)MPVLGSVSSVTK ddPTM_A549_MK2206_60min_R1 5 SMPVLGSVSSVTK 13 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 S(0.998)MPVLGS(0.002)VSSVTK;S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK 140.1 1.9265e-09 17280500.0 10963.3 13613.0 12947.099999999999 12058.900000000001 15998.8 11846.5 11354.7 11529.0 17998.0 16236.7 17123.9 True False 12813.637013049329 14305.843554175828 14783.193464083632 15013.331041344596 13645.397713482202 13100.088766929734 13417.70201238254 13163.271056081714 13921.48173690013 12568.8181931221 12871.563034402572 0.9954996901931474 1.111430174869965 1.1485157959893242 1.1663953321921818 1.0601197132789046 1.017754310950144 1.0424298880035214 1.0226629835785659 1.0815688583967138 0.9764795588172697 1.0 13.651899634744506 -6.986264483446841 24.260907027269383 1.0371949560346518 1.1094990272071952 0.370357057572656 0.04806668169434285 151.56758040930666 267709.65047990024 0.007000888054044473 0.013225731428983388 1.0321326500402015e-07 6.986264483446841 0.07230407117254334 S(ph)MPVLGSVSSVTK ddPTM_A549_PD325901_60min_R1 2 SMPVLGSVSSVTK 13 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK 192.39 6.9982e-26 9786300.0 6332.4 6445.6 6362.299999999999 7199.9 7267.4 6744.1 7721.4 7030.4 8085.9 7533.8 7658.1 True False 6975.260586333507 6988.793332835167 6794.083937617905 7644.621470840707 6756.962895168936 6689.1782855992315 8015.2421023122 6890.173156757895 7746.077742474689 7058.114582273644 6716.202248695645 1.0385721465859927 1.0405870868752445 1.0115960904747003 1.1382357451080884 1.0060690022372698 0.9959763029617428 1.193418811035484 1.0259031669417098 1.1533419417169959 1.0509085821000108 1.0 12.713429960261163 S(ph)MS(ph)IDDTPR ddPTM_A549_PD325901_60min_R1 2 SMSIDDTPR 9 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0C4DGY6;A0A1B0GVW2 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 2 S(1)MS(0.999)IDDT(0.001)PR;S(0.999)MS(0.979)IDDT(0.022)PR 70.942 0.0038332 4644400.0 1242.71 985.1999999999999 1001.75 1177.2199999999998 1199.38 1070.19 1118.2 1236.3000000000002 1120.27 973.56 1259.1599999999999 True False 1368.8690043652507 1068.2262615597 1069.7347790121091 1249.9342057393976 1115.1396864363774 1061.4747274603635 1160.7537129025184 1211.6410266414118 1073.1889477438654 912.0892554512104 1104.2913024728866 1.239590496909542 0.9673410079093945 0.968707058197965 1.1318881195028583 1.0098238426212336 0.9612271011130468 1.051129996499287 1.0972114186973423 0.9718350088791133 0.825949867945831 1.0 10.10890507742817 -5.255922416842804 24.93419361216317 1.0042969263238153 1.2395906010118647 0.4487074370221612 0.07657664249120477 303.69669646460466 1372528.1572314156 0.00752508707578344 0.09143434892162085 5.547248011557576e-06 5.255922416842804 0.2352936746880494 S(ph)MSAPSDLEMIGNEDLEFTR ddPTM_A549_PD325901_60min_R1 1 SMSAPSDLEMIGNEDLEFTR 20 0 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;Q9Y4D8-2 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 S(0.533)MS(0.467)APS(0.001)DLEMIGNEDLEFTR 68.567 0.00041775 3887600.0 678.13 1019.4 1048.7 874.17 1249.0 928.76 871.82 985.56 926.15 1196.3 1171.1 True False 746.9732583870796 1105.308415584611 1119.8710883453944 928.1654955158845 1161.2745488160836 921.1964864893966 904.9975871782092 965.9022326431372 887.2271362733815 1120.7654138381642 1027.0621242145528 0.7272912132343781 1.0761845749398045 1.0903635349242553 0.90370920476276 1.1306760530227613 0.8969238225914357 0.8811517490924002 0.9404516142407766 0.8638495329110589 1.0912342957786232 1.0 10.004307733684868 S(ph)MSDVSAEDVQNLR ddPTM_A549_MK2206_60min_R1 1 SMSDVSAEDVQNLR 14 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10;E9PK58;E9PLU6 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.996)MS(0.004)DVSAEDVQNLR 73.02199999999999 0.0011485999999999998 1286500.0 1221.8 1239.2 1310.7 1022.2 1489.9 1535.1 1215.7 1449.0 1872.4 1716.3 1376.6 True False 1428.0099698579497 1302.2699869488506 1496.5769688481912 1272.6390458883013 1270.737683658595 1697.54326308309 1436.5769537243136 1654.4001873763914 1448.3043896083896 1328.5866379778813 1034.752227772795 1.3800501526163458 1.25853315605018 1.4463143240284968 1.2298973722700117 1.2280598674271386 1.6405311508600364 1.3883294137152116 1.5988370384447774 1.3996629828241354 1.2839659604672091 1.0 10.015069639288086 -10.518503101170822 0.8928453566787986 1.0064614556230778 1.3942559406596098 0.23073272708239445 0.15075051969156286 0.33522215092762814 0.49081544878921635 0.08037146177533934 0.02443004652701225 3.030378658656807e-11 10.518503101170822 0.387794485036532 S(ph)MSDVSAEDVQNLR ddPTM_A549_PD325901_60min_R1 1 SMSDVSAEDVQNLR 14 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10;E9PK58;E9PLU6 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.602)MS(0.398)DVSAEDVQNLR 128.35 4.1485e-09 17897000.0 7096.4 6636.7 7429.7 7281.1 8401.3 6950.1 7095.9 6666.1 6938.2 7851.5 8147.3 True False 7816.821303906431 7195.998000500674 7933.92412041554 7730.837010422124 7811.221670911578 6893.500689898316 7365.938357525472 6533.139406045718 6646.61158224043 7355.754950054627 7145.233749989952 1.0939909843981555 1.0071046311831007 1.1103799256989593 1.0819571872554898 1.0932072965314203 0.9647690937903899 1.0308883677228657 0.9143352946367787 0.9302161153579862 1.029463164877562 1.0 12.802765493244923 -7.2665760669164525 24.160160382087035 0.9670644138949824 1.0755201030784574 0.567716990417947 0.04241206058767153 136.4017277729035 641559.1477834564 0.006205098916956461 0.010107777333113951 5.412824336647265e-08 7.2665760669164525 0.10845568918347492 S(ph)MSENAVR ddPTM_A549_MK2206_60min_R1 5 SMSENAVR 8 0 A0A0A0MS29;Q9GZY8-2;H7C433;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.58)MS(0.42)ENAVR;S(0.728)MS(0.272)ENAVR;S(0.587)MS(0.413)ENAVR;S(0.566)MS(0.434)ENAVR;S(0.911)MS(0.089)ENAVR 107.55 0.0018191 3133922000.0 10653.3 12800.5 11106.7 10925.1 16278.2 13035.5 13386.6 13081.900000000001 20389.3 19975.5 20847.3 True False 12451.316591821664 13451.990774643928 12681.79707019625 13601.749990446375 13883.698343601149 14414.907957735399 15818.771941042924 14936.29938663851 15771.15610502154 15463.020676412738 15670.340053790358 0.794578582792779 0.858436430126489 0.8092866540652233 0.8679932881964721 0.8859857728641278 0.9198848211496665 1.0094721548315515 0.9531573236680146 1.006433558613605 0.9867699503223305 1.0 13.935748866864339 -7.23183674221638 0.8695357414882274 1.0026268446456095 0.8188470261762134 0.9029960802803991 0.023570882469268563 0.1018452474366615 0.1509061111387532 0.003664868819419232 0.00920598786822909 5.863585440256962e-08 7.23183674221638 -0.18377981846939606 S(ph)MSENAVR ddPTM_A549_PD325901_60min_R1 3 SMSENAVR 8 0 A0A0A0MS29;Q9GZY8-2;H7C433;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.915)MS(0.085)ENAVR;S(0.919)MS(0.081)ENAVR;S(0.797)MS(0.203)ENAVR 108.47 0.0017477999999999999 2208440000.0 11055.5 10477.4 10581.2 10638.699999999999 11344.400000000001 11842.599999999999 10597.4 11015.0 10005.6 11574.800000000001 10982.6 True False 12177.846221371052 11360.367268438502 11299.303861924553 11295.828336759256 10547.608480055387 11746.157792001513 11000.689856119789 10795.297183899671 9585.099427411269 10843.965152632276 9631.809824437492 1.264336240368227 1.1794634108758433 1.1731236463220394 1.1727628080965504 1.0950806413654848 1.2195172045651868 1.1421207495406753 1.1207963384524287 0.9951504028964825 1.1258491758339482 1.0 13.233591191704727 -8.594917707641986 2.211073038143698 0.9964663049100979 1.1767377798411567 0.49595474365389525 0.05600035968470398 0.08857363719170676 0.859877067587903 0.006925296965276178 0.007928257725588736 2.541454227780132e-09 8.594917707641986 0.18027147493105877 S(ph)MSFQGIR ddPTM_A549_PD325901_60min_R1 1 SMSFQGIR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 S(0.819)MS(0.181)FQGIR 60.167 0.0040569000000000004 13915000.0 2481.2 2895.6 2280.5 2321.7 3401.8 2736.7 2538.9 2644.2 3060.7 2839.8 3154.3 True False 2733.0895974371 3139.6223741090835 2435.2684437605344 2465.1061360367316 3162.869303572902 2714.413222549993 2635.519228839389 2591.4593566652275 2932.0694228709576 2660.4945433567004 2766.341096755158 0.987979971321302 1.134936822430095 0.8803211023459967 0.8911070796469146 1.1433403159439957 0.9812286799100534 0.952709422540402 0.936782293298877 1.0599088544468338 0.9617377070663438 1.0 11.433763340014337 -8.78426418437814 24.992684411921832 1.028290284140953 0.9902953215275743 0.0 0.08359524223137572 643.1033833632213 704181.7151405474 0.01414274521726308 0.01506074574574297 1.6433717445450173e-09 8.78426418437814 -0.03799496261337865 S(ph)MSIDDTPR ddPTM_A549_MK2206_60min_R1 3 SMSIDDTPR 9 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0C4DGY6;A0A1B0GVW2 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.981)MS(0.019)IDDTPR;S(0.999)MS(0.001)IDDTPR;S(0.809)MS(0.191)IDDTPR 143.5 3.5595e-05 60149900.0 3360.19 3788.9900000000002 3762.1099999999997 3460.94 5035.48 4214.26 4008.46 4091.47 6017.380000000001 5300.09 5454.49 True False 3927.3079232419254 3981.8334069152074 4295.633768424103 4308.870455367502 4294.7675624600215 4660.210196000613 4736.745295653335 4671.448402101366 4654.453037781312 4102.79598792763 4099.9895967343 0.9578824117919914 0.971181343993359 1.0477182117353754 1.0509466801573297 1.0475069414519649 1.1366395172593942 1.155306662101343 1.1393805500926737 1.1352353287648949 1.0006844873937157 1.0 12.001404533719912 -5.8190779894788 1.2108652665533703 1.0821549382564024 0.9407366523371968 0.43876926297779795 0.05186090981496518 0.6310104173493153 1.3558131795561548 0.009471665874282416 0.08672043629612537 1.5167779639410342e-06 5.8190779894788 -0.14141828591920558 S(ph)MSIDDTPR ddPTM_A549_PD325901_60min_R1 3 SMSIDDTPR 9 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0C4DGY6;A0A1B0GVW2 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.999)MS(0.001)IDDTPR;S(0.918)MS(0.082)IDDTPR;S(0.908)MS(0.089)IDDT(0.003)PR 164.33 3.861e-06 65384800.0 4715.490000000001 4734.360000000001 4444.09 4458.76 5818.240000000001 4738.46 5271.53 5284.11 6093.2 5226.08 5814.48 True False 5194.203073439734 5133.341132437868 4745.692671884122 4734.16747862133 5409.586894238341 4699.871552791404 5472.140958841899 5178.714280745897 5837.123993673775 4896.10441691161 5099.335821025565 1.0186038448425014 1.006668576576599 0.9306491744114396 0.9283890382550265 1.0608414672227608 0.9216634710373278 1.0731085676450618 1.0155664311012895 1.1446831898393834 0.9601455147793971 1.0 12.316093635645759 -7.7837504728522795 24.99435627759858 1.065588395559128 0.9784997681831593 0.13550373380070124 0.06138395308756616 221.8745768224001 248557.77549054028 0.009995382300891684 0.013816220249232831 1.6453167807748508e-08 7.7837504728522795 -0.08708862737596879 S(ph)MSPFR ddPTM_A549_MK2206_60min_R1 1 SMSPFR 6 0 Q99640-4;Q99640-3;Q99640;B4DZM6;I3L4K3;I3L3P0;I3L136;A6NHV6;Q99640-2;I3L1H7 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 S(0.782)MS(0.218)PFR 62.717 0.060860000000000004 10962000.0 750.16 790.22 818.44 747.32 1057.2 776.74 590.24 925.45 916.03 860.14 859.96 True False 876.7686683488627 830.4388226974821 934.5070987900466 930.4134335484695 901.6872804643713 858.9341112417166 697.4789678096888 1056.63537157176 708.5506675993238 665.833776606826 646.4081983114143 1.3563699696866618 1.2846972313575284 1.4456919037091753 1.4393589623073322 1.3949193138636116 1.3287797300304591 1.0790069953191879 1.6346255730233086 1.0961350265207679 1.0300515654754323 1.0 9.336301685494718 -8.94110386876394 11.667228984946545 1.0423480450680687 1.3624508411962233 0.5724564706790205 0.12702235050449984 0.3283977564607403 64.14241550461179 0.021082459865369125 0.022406073396542246 1.1452390056922338e-09 8.94110386876394 0.3201027961281546 S(ph)MSPFRGPK ddPTM_A549_MK2206_60min_R1 2 SMSPFRGPK 9 1 Q99640-4;Q99640-3;Q99640;B4DZM6;I3L4K3;I3L3P0;I3L136;A6NHV6;Q99640-2 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 S(0.576)MS(0.424)PFRGPK;S(0.588)MS(0.412)PFRGPK 50.284 0.0064747 52768000.0 10130.2 10757.7 11136.2 9822.599999999999 14940.1 11221.4 9982.099999999999 11171.099999999999 16348.1 15514.2 15373.9 True False 11839.930100388785 11305.220980148197 12715.480613784413 12229.137440953265 12742.431081030792 12408.84109983752 11795.718359604722 12754.637635058942 12645.281452551231 12009.531444920158 11556.136331945505 1.0245578418505472 0.9782872627502945 1.1003228283690325 1.0582375535971598 1.1026549631303606 1.0737880502097243 1.0207320181051276 1.1037112464483765 1.0942482062620635 1.0392341436576253 1.0 13.496371508663396 -5.748442419894529 24.999883129353584 1.0572321937342788 1.0014225500743468 0.3085441614005755 0.035326829494364 286.40393163975773 550893.528030122 0.005948901153007076 0.02276666627393536 1.7846685897360948e-06 5.748442419894529 -0.05580964365993202 S(ph)MSPFRGPK ddPTM_A549_PD325901_60min_R1 1 SMSPFRGPK 9 1 Q99640-4;Q99640-3;Q99640;B4DZM6;I3L4K3;I3L3P0;I3L136;A6NHV6;Q99640-2 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 S(0.593)MS(0.407)PFRGPK 51.927 0.0056923 47202000.0 3505.8 3973.4 3352.0 3323.6 4270.0 4215.1 3745.7 3980.1 4256.2 3792.0 3947.8 True False 3861.7062351664467 4308.252362648511 3579.4868772134655 3528.8912235567373 3970.0899307003006 4180.773623111949 3888.244663225685 3900.7137831719506 4077.326715334197 3552.5724728532296 3462.245627166093 1.1153761607397332 1.2443520265703645 1.0338627765538797 1.0192492398193005 1.146680610858302 1.207532357123369 1.1230412518155968 1.1266427062729085 1.1776537988356297 1.0260890922869244 1.0 11.75749236422626 -10.883042291632947 1.0885350505774156 0.9986769911315925 1.1352398680591314 0.34547887007906086 0.0631986840803754 0.4521416467513664 0.9360632275712135 0.0476046028052039 0.0110009395315555 1.3090544409615283e-11 10.883042291632947 0.13656287692753888 S(ph)MSPTSTPK ddPTM_A549_PD325901_60min_R1 1 SMSPTSTPK 9 0 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(0.866)MS(0.132)PT(0.001)STPK 141.91 3.8577e-05 17945000.0 9814.3 9279.3 8628.6 9632.4 12236.0 10473.0 10173.0 11006.0 11915.0 11567.0 12454.0 True False 10810.640511094203 10061.299176706181 9214.188683986906 10227.37147123238 11376.58557190841 10387.71136031208 10560.139081879206 10786.47669596003 11414.253985528634 10836.657645963438 10922.236952410596 0.9897826386844901 0.9211756914398015 0.8436173582512587 0.9363806622941965 1.0415984950223531 0.9510607951074945 0.9668476455776329 0.9875702882988082 1.0450472769691603 0.9921646722351807 1.0 13.414980740353547 -7.258891222213093 0.7419117856281003 1.0187866657440212 0.9192938555428604 0.2880445941601104 0.04600667894583844 0.5224628550194977 0.5578304218965829 0.00906999296594763 0.024494510106113736 5.509456745490105e-08 7.258891222213093 -0.09949281020116085 S(ph)MSTLTPR ddPTM_A549_PD325901_60min_R1 1 SMSTLTPR 8 0 Q9NS62-2;Q9NS62 Q9NS62-2 THSD1 Thrombospondin type-1 domain-containing protein 1 1 S(0.387)MS(0.387)T(0.076)LT(0.15)PR 45.161 0.052363 3851500.0 1137.9 1127.8 979.1 1465.7 1499.6 1276.7 1387.4 1185.6 1425.4 1551.7 1788.5 True False 1253.4187703222938 1222.8436640144448 1045.5476138065937 1556.2329601537833 1394.2732693391501 1266.3029784885364 1440.1982662144108 1161.9522779147933 1365.4953949620237 1453.725397185221 1568.5258382356146 0.7991062306835985 0.7796133376992904 0.6665797835901112 0.9921627825425821 0.888906790918742 0.80732044549101 0.9181858730707583 0.7407925643238602 0.8705597075136655 0.9268099777179769 1.0 10.6151935794715 -14.99999998610898 0.12966874595017377 1.6007923967364899 0.7559037465180451 0.26119947271898236 0.08594776200338611 55.174157688356125 0.48984524409948665 8.513023069104094 0.2479975959325287 1.000000031985256e-15 14.99999998610898 -0.8448886502184447 S(ph)MSYSSQK ddPTM_A549_PD325901_60min_R1 1 SMSYSSQK 8 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 S(0.835)MS(0.161)Y(0.002)S(0.001)SQK 54.405 0.0081704 18385000.0 2952.5 2872.3 3357.0 3500.2 3822.9 2904.1 3540.2 3678.8 3356.4 3609.9 4079.7 True False 3252.235626484376 3114.3588013377266 3584.8262072809052 3716.399404469036 3554.3926922890364 2880.4499724512857 3674.924248271771 3605.423448037232 3215.3421801954096 3381.970297930614 3577.9227633490837 0.9089731225612453 0.8704376833508161 1.0019294558291023 1.0387030828441732 0.9934235385679421 0.8050620885273291 1.0271111176340457 1.0076862153006363 0.8986617076064873 0.9452328967450795 1.0 11.80490652891721 -11.191251884956053 1.6173946668696293 0.9999979730063575 0.9446575856911831 0.0 0.07159734298187206 0.896169517454188 4.215835724017675 0.052064253571770296 0.010914208173505996 6.437957643318044e-12 11.191251884956053 -0.05534038731517443 S(ph)MTLPSYRPAPLVSGDLR ddPTM_A549_MK2206_60min_R1 2 SMTLPSYRPAPLVSGDLR 18 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 S(0.499)MT(0.499)LPS(0.002)YRPAPLVSGDLR;S(0.52)MT(0.479)LPS(0.001)YRPAPLVSGDLR 54.271 0.0033061999999999996 2974300.0 1742.49 1699.6 1376.67 1231.38 1994.3700000000001 1940.5900000000001 1408.18 1479.09 2480.7 2616.1 2781.1000000000004 True False 2036.5797122096753 1786.102380421453 1571.9025068316487 1533.0681552787482 1701.0008149259638 2145.941945740614 1664.0280782228378 1688.755537023151 1918.8254108638814 2025.1211930396425 2090.476115544763 0.9742181204873308 0.8543998025808621 0.751935166894754 0.7333583693584759 0.8136906240053813 1.0265326304296936 0.7960043484109379 0.8078329737735718 0.9178891816058129 0.9687368241047377 1.0 11.029615844819086 -9.42819779132799 0.6454571950582924 0.9937014899403466 0.8368779174060754 0.2719731359466686 0.084999936915981 0.5630341034232473 0.5184082405709811 0.03533254454161617 0.022041938026716144 3.730802066709571e-10 9.42819779132799 -0.15682357253427115 S(ph)NDHFIVK ddPTM_A549_MK2206_60min_R1 2 SNDHFIVK 8 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 S(1)NDHFIVK;S(1)NDHFIVK 54.471000000000004 0.0070347 7608500.0 1032.73 1324.13 1208.26 1253.13 2700.8 1815.66 1607.17 1892.46 2464.9 1513.6599999999999 1616.73 True False 1207.0295761756433 1391.5225611834906 1379.6094364694573 1560.1469062551437 2303.515897728125 2007.7919360624344 1899.1719854545574 2160.722000415683 1906.6040856364673 1171.7231547174736 1215.2513215219462 0.993234530832679 1.1450492063162598 1.1352461931427267 1.283805973813927 1.8955057747588104 1.6521619030604573 1.5627812550543771 1.7780042384234203 1.5688969449123416 0.9641817572763803 1.0 10.247038987644473 -6.342440106751959 3.95096429701513 1.406910317150374 1.0939314803904516 0.24821597742781742 0.2809446083621539 0.3525397199760159 10.34580664592054 0.04723481276509939 0.11693426077815665 4.545272164176836e-07 6.342440106751959 -0.31297883675992244 S(ph)NDHFIVK ddPTM_A549_PD325901_60min_R1 2 SNDHFIVK 8 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 S(1)NDHFIVK;S(1)NDHFIVK 70.942 0.001955 8383900.0 1909.31 1475.79 2050.58 1975.0700000000002 2396.0 1898.89 1780.19 2018.71 2141.83 2276.8 2258.6000000000004 True False 2103.1417456402673 1600.1600025854555 2189.7446899392557 2097.0655881905795 2227.7132257512703 1883.426069414972 1847.9361046073473 1978.4452454026411 2051.8163335144586 2133.042459438882 1980.8065184450447 1.0617603112954501 0.8078325609719818 1.1054813630451044 1.0586927944061895 1.1246495833929555 0.9508379803260556 0.9329210538230649 0.9988079234289591 1.0358489405240636 1.0768555331256402 1.0 10.95187225196062 -5.780035694998802 24.999074095876864 1.02042269428474 0.934796238434043 0.17153981780702154 0.0789752643763204 269.52301700254844 362321.4470760453 0.009921949675290361 0.030924965697828568 1.6594505103135796e-06 5.780035694998802 -0.08562645585069706 S(ph)NDRNSMDIQCEVDALLER ddPTM_A549_MK2206_60min_R1 1 SNDRNSMDIQCEVDALLER 19 1 H7BYN4;H0YME6;A0A2R8Y531;Q02241;A0A2U3TZL8;Q02241-2 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 S(0.564)NDRNS(0.436)MDIQCEVDALLER 42.325 0.016978999999999998 27677000.0 292.63 224.04 212.52 184.36 173.54 207.56 200.92 170.55 268.93 289.54 340.87 True False 342.018789883395 235.44267904778906 242.65853163929032 229.52820827623484 148.01249588704792 229.5238614328227 237.42456324939454 194.72598478746963 208.01778439296305 224.13271290573675 256.2225714665937 1.3348503526668705 0.9188990560048534 0.9470614952083881 0.8958157236594619 0.5776715729603307 0.8957987585521834 0.9266340661964277 0.759987629789509 0.8118636199858934 0.8747578779762546 1.0 8.001253762677376 -5.027485091415666 1.882631322744015 0.8769409264515173 1.7468080493730758 0.606253661074738 0.1093652350752664 1.0814651151088914 2.278620504947868 0.017111337572106703 2.02413368509632 9.386742591956562e-06 5.027485091415666 0.8698671229215584 S(ph)NFSNSADDIK ddPTM_A549_MK2206_60min_R1 2 SNFSNSADDIK 11 0 P45973 P45973 CBX5 Chromobox protein homolog 5 1 S(1)NFSNSADDIK;S(0.999)NFS(0.001)NSADDIK 100.4 0.00026799 39080000.0 6674.299999999999 7257.799999999999 6075.6 6081.4 8062.799999999999 5975.6 6322.5 5269.9 8693.599999999999 8221.9 8781.5 True False 7800.758669031689 7627.191019429764 6937.211438112516 7571.34327300442 6876.772800726578 6607.934025717749 7471.216410234407 6016.9244633918815 6724.5134808264775 6364.567079642457 6600.811192929537 1.1817878804634612 1.155492983589598 1.0509634702994253 1.147032243720964 1.0418072263743337 1.001079084460989 1.131863371313696 0.9115431857582768 1.0187404675397236 0.9642098362788906 1.0 12.688427617027521 -5.060246343609568 0.36557777848251727 1.0009762962911992 1.3492983194874455 0.5611638025289187 0.05535666227160917 3.5766526735858832 0.28941920728502096 0.013686446851617046 0.5630810639632358 8.704696958728882e-06 5.060246343609568 0.3483220231962463 S(ph)NFSNSADDIK ddPTM_A549_PD325901_60min_R1 2 SNFSNSADDIK 11 0 P45973 P45973 CBX5 Chromobox protein homolog 5 1 S(0.999)NFS(0.001)NSADDIK;S(1)NFSNSADDIK 219.95 8.550000000000001e-32 53428000.0 13682.7 15313.3 14611.5 15654.8 17010.0 16918.2 15065.0 16440.6 18297.3 20474.6 19757.5 True False 15071.75763132864 16603.805533031027 15603.124256087278 16621.761441369603 15815.27628131432 16780.423788411335 15638.306818884319 16112.6793355988 17528.32811157474 19181.8302617829 17327.45275311163 0.8698195774114625 0.9582369532099488 0.9004857481596826 0.9592732225678526 0.9127294419241307 0.96842992605465 0.9025162002577686 0.9298931334673711 1.0115928960433633 1.1070196257403309 1.0 14.080771964194241 -8.757147652354867 23.664438656384124 1.0054744279932055 0.9268607860472295 0.5698920192249604 0.04144300231263428 22.722529002477668 125290.67560696573 0.004207210392208414 0.004685133431419291 1.74925187317211e-09 8.757147652354867 -0.07861364194597598 S(ph)NGDLSPK ddPTM_A549_MK2206_60min_R1 2 SNGDLSPK 8 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 S(1)NGDLSPK;S(1)NGDLSPK 98.182 0.0020935 13826000.0 2930.7 3459.5 2668.4 2841.3 4042.0 3640.8 2698.1 3141.8 4922.9 4066.7 4085.4 True False 3425.330511264276 3635.573773280783 3046.8192444300867 3537.4186275508023 3447.427154405023 4026.0670394325552 3188.309845227909 3587.1597713589663 3807.871010255896 3148.0296455541884 3070.882428696049 1.115422224978744 1.1838856933459716 0.9921640815548318 1.1519225205417105 1.1226177603513339 1.3110456466228486 1.0382389815495874 1.1681201917203121 1.2399924447360837 1.0251221655825156 1.0 11.584437563246102 -3.698098891874032 13.361987436284751 1.1255604438611169 0.5394036044459091 0.0 0.09760398285060871 0.0 0.0 0.013873466223529838 0.0 0.00020040156471059508 3.698098891874032 -0.5861568394152078 S(ph)NGDLSPK ddPTM_A549_PD325901_60min_R1 1 SNGDLSPK 8 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 S(1)NGDLSPK 98.182 0.0024411 16312000.0 4672.2 5454.0 5171.7 5716.7 5925.5 5661.8 4919.9 5245.3 5744.2 5919.9 6545.3 True False 5146.518304508147 5913.627720814667 5522.682661958496 6069.807575432305 5509.313321865255 5615.692177963807 5107.129486772584 5140.678376641756 5502.791249993585 5546.1165037035435 5740.269594075239 0.8965638669340675 1.0302003458022873 0.9620946492928968 1.0574081018245547 0.9597656053561728 0.9782976367103012 0.8897020258497711 0.8955465056811364 0.9586294092655917 0.9661770083809149 1.0 12.48690277990832 -4.318699717899943 16.02123949048436 0.9711335360062804 0.9744719710823988 0.0 0.052322221097409305 0.0 0.0 0.006778378454574465 0.0 4.8006526307748144e-05 4.318699717899943 0.003338435076118418 S(ph)NLDITVGSR ddPTM_A549_MK2206_60min_R1 2 SNLDITVGSR 10 0 P42356;P42356-2 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 S(1)NLDITVGSR;S(1)NLDITVGSR 152.4 2.2199e-08 8962800.0 1325.1 1332.66 1277.53 1576.06 2149.24 1857.56 1721.9299999999998 1803.56 2182.86 2001.7 2103.56 True False 1548.7444844154286 1400.4867017489141 1458.70296407464 1962.1947707520228 1833.0896430810114 2054.1257662514654 2034.7823919770544 2059.2201531708524 1688.4456953111362 1549.514579758974 1581.1879966974734 0.9794815592138268 0.8857180200419061 0.9225360723211534 1.240962349101014 1.1593116358773712 1.299102807851936 1.286869364191339 1.302324680855037 1.0678336155078871 0.9799685951293244 1.0 10.626793193015505 -6.229307492737597 23.39022785760212 1.1095415350410749 0.9248923419054998 0.37808536180116337 0.12035579355911255 340.5890645561562 247928.3409625792 0.020177953320127662 0.0533787270032207 5.897833490672253e-07 6.229307492737597 -0.18464919313557504 S(ph)NMSVAR ddPTM_A549_MK2206_60min_R1 1 SNMSVAR 7 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 S(0.996)NMS(0.004)VAR 56.916000000000004 0.036443 2435900.0 1105.5 832.58 865.21 875.55 1419.5 884.89 957.79 789.94 1339.3 1094.7 1334.2 True False 1292.081373119958 874.9547657632937 987.9097880652665 1090.0597893049332 1210.6934304002789 978.5284724575569 1131.8080451654268 901.9164140897901 1035.9506884226207 847.4065096978306 1002.8813179532642 1.288369171894546 0.8724409858874925 0.9850714839134181 1.08692800413272 1.2072150599745233 0.975717121198939 1.1285563155920417 0.8993251723249478 1.032974360851438 0.8449718770584588 1.0 9.969935170640928 -8.225139745848617 24.996219915967682 1.0072877936084705 1.067702567445088 0.14890297567363808 0.12223743635891833 1324.7435612664694 912230.6484177394 0.01682269008172378 0.021717491360500555 5.954705041596809e-09 8.225139745848617 0.06041477383661742 S(ph)NPDFLK ddPTM_A549_MK2206_60min_R1 2 SNPDFLK 7 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)NPDFLK;S(1)NPDFLK 100.48 0.011217 8359800.0 2011.64 2318.2 2162.3599999999997 1741.52 2991.4 2483.1 2660.7 3059.6000000000004 3584.6 3003.2 2993.3999999999996 True False 2351.1556521239554 2436.1864781672225 2469.015163163635 2168.1924781798034 2551.369022683617 2745.859993851618 3144.114749341351 3493.307669632025 2772.6938234299487 2324.775034187016 2250.056166362841 1.0449319831533534 1.082722518036186 1.0973126804895434 0.9636170468067168 1.1339134821722432 1.2203517560587083 1.3973494512466917 1.552542430653573 1.2322776048350554 1.0332075567451084 1.0 11.135745299402965 -6.988757084357587 21.928818701062678 1.1799177079563363 1.052707270145672 0.21051470837296815 0.1523406914868015 100.73435467573127 196470.21119206503 0.026765849170866808 0.05052666117031404 1.0262257686511897e-07 6.988757084357587 -0.12721043781066443 S(ph)NPDFLK ddPTM_A549_PD325901_60min_R1 1 SNPDFLK 7 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)NPDFLK 93.556 0.012134 4473600.0 2396.2 2459.6 2152.6 2709.5 3391.6 2506.4 2178.8 1901.9 2452.4 2580.8 2468.2 True False 2639.4604600107928 2666.8791239669513 2298.6883806353544 2876.8596612790307 3153.385716384812 2485.9887093942725 2261.715426285107 1863.965112488313 2349.334156450726 2417.8478475579177 2164.6270472089154 1.2193603805395163 1.232027072472204 1.0619327627820685 1.3290324839045473 1.4567801508582314 1.1484605223794662 1.044852243346667 0.8611021999802331 1.0853297612999768 1.1169812604326028 1.0 11.079902762966698 -7.604975438136135 4.019788107383411 1.0256999452376145 1.2552285751521215 0.5258755610353072 0.10726646355177226 0.14091184086772923 4.407658531700692 0.01664723723348104 0.025192246118296402 2.483273544800432e-08 7.604975438136135 0.22952862991450695 S(ph)NPDFLKK ddPTM_A549_MK2206_60min_R1 2 SNPDFLKK 8 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)NPDFLKK;S(1)NPDFLKK 64.439 0.0039402000000000005 30992000.0 4263.9 4361.1 4545.1 3648.5 5945.9 3882.7 3943.9 3979.8 5233.0 6038.700000000001 6960.4 True False 4983.542077653721 4583.06136223582 5189.6635241564945 4542.38266378739 5071.265986486103 4293.564736872332 4660.455579331513 4543.948837626338 4047.733855383843 4674.5534759407055 5231.940582732652 0.9525226823296239 0.8759773337949642 0.9919194306763178 0.86820226490701 0.9692896748910272 0.8206447816022016 0.8907699744742416 0.8685016134592694 0.7736582232494896 0.8934645571795041 1.0 12.353130441422453 -7.242122050834407 24.70465015493325 0.8838514273117318 0.9283240597593538 0.16297264463063754 0.06228012167558635 1840.1266469103077 2353311.1613897374 0.012767804238058273 0.02209236005601457 5.726350793416378e-08 7.242122050834407 0.04447263244762201 S(ph)NPDFLKK ddPTM_A549_PD325901_60min_R1 2 SNPDFLKK 8 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)NPDFLKK;S(1)NPDFLKK 54.776 0.009305299999999999 65976000.0 4464.9 4626.1 5174.2 4422.4 5862.7 4777.8 4584.8 5306.4 4751.7 5253.799999999999 5106.799999999999 True False 4918.173361114345 5015.95768229936 5525.352326992214 4695.561604000881 5450.9241772170135 4738.89118087454 4759.277072898829 5200.559689209727 4552.002573481859 4922.074171380885 4478.695974672431 1.0981261931881987 1.1199594057433704 1.233696673817279 1.048421600964846 1.2170784103325278 1.0580961975703518 1.0626479448065058 1.1611772084150216 1.0163678443957764 1.0989971632849855 1.0 12.128863020353524 -8.636827767991342 0.7435335154754412 0.9996293469455702 1.1370544610296212 0.14772432486479103 0.0673324257273706 0.35607898988129455 0.4056490336126228 0.014397524092632528 0.015773209425501786 2.3076621773010677e-09 8.636827767991342 0.137425114084051 S(ph)NPEGAEDR ddPTM_A549_PD325901_60min_R1 2 SNPEGAEDR 9 0 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 S(1)NPEGAEDR;S(1)NPEGAEDR 122.46 0.00011311 46094000.0 5481.6 5984.2 5934.200000000001 6785.8 6905.3 5437.200000000001 5884.4 6046.4 6233.4 7061.2 5853.700000000001 True False 6038.08799665936 6488.509535551727 6336.9304972434775 7204.943454330037 6420.2955499917525 5392.921245897918 6108.334062067236 5925.79980869096 5971.431875232409 6615.354626928067 5133.732009661627 1.1761595629253232 1.2638972044782282 1.2343711135130242 1.4034514152219892 1.2506097976888602 1.05048748858501 1.1898427986835736 1.1542869393140645 1.1631756125941597 1.2886053682736152 1.0 12.325792271182477 -10.638397786775721 0.1939137537200896 0.846412435441009 1.2951638341095641 0.0 0.11380414847930731 4.532834275643852 0.2664114059109109 0.5318354889248945 0.12129997393396688 2.299334804717072e-11 10.638397786775721 0.4487513986685552 S(ph)NRFSGGFGAR ddPTM_A549_PD325901_60min_R1 1 SNRFSGGFGAR 11 1 O15523-2;O15523 O15523-2 DDX3Y ATP-dependent RNA helicase DDX3Y 1 S(0.93)NRFS(0.07)GGFGAR 70.889 0.00078118 61638000.0 2100.2 2170.2 1685.5 2142.4 2193.7 2016.9 1993.2 2061.9 2232.6 2139.4 2179.7 True False 2313.410757914475 2353.0903703175636 1799.888165734873 2274.7311822565753 2039.6220798541583 2000.4750351010648 2069.05231672089 2020.773786970742 2138.771586075636 2004.3179188877123 1911.6107182567334 1.2101892586290568 1.2309464201285873 0.9415558034620436 1.189955235410578 1.0669651830128695 1.0464866178012278 1.0823607008270664 1.0571052817770128 1.1188321794021217 1.0484969035513265 1.0 10.900573046463773 -2.0000000000000164 0.01295739600436208 5.2183143650218846e-12 2.397538374748489 0.23538724436983038 0.07482938642135428 6273.94194484733 6.107805438010595 463.47543906419344 687.5195476979924 0.009999999999999622 2.0000000000000164 2.3975383747432706 S(ph)NRNSIERER ddPTM_A549_PD325901_60min_R1 1 SNRNSIERER 10 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.629)NRNS(0.371)IERER 43.382 0.013958000000000002 8424400.0 457.27 505.49 626.88 658.49 986.22 671.17 672.3 708.42 623.2 622.74 852.42 True False 503.69171377561776 548.0894163173091 669.4238465356733 699.1634317607046 916.9513094742977 665.7042140457046 697.8847443966757 694.2900073552609 597.009071236378 583.4200901225267 747.5777439355903 0.6737649934894461 0.733153736535703 0.895457164109141 0.9352384249429221 1.2265631459907402 0.8904815846190577 0.9335279842905596 0.9287194716367578 0.7985912850929053 0.7804139366845476 1.0 9.546079809163171 -5.733204178180069 2.879269730003225 0.9301041325168126 0.682276415663797 0.39681639555843573 0.11047317308587172 0.21177464384630706 3.444077349181957 0.01608082090950989 0.0763601488081441 1.8483994125447387e-06 5.733204178180069 -0.24782771685301552 S(ph)NS(ph)LRRDSPPPPAR ddPTM_A549_PD325901_60min_R1 1 SNSLRRDSPPPPAR 14 2 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 2 S(0.985)NS(0.985)LRRDS(0.031)PPPPAR 52.555 0.006842399999999999 32620000.0 574.03 513.13 720.6 481.53 604.03 646.74 555.75 545.31 530.47 564.83 534.38 True False 632.3051030214489 556.3732659298919 769.5042493198156 511.2730144660238 561.6050165903753 641.4731638659634 576.899370368069 534.4333642625808 508.1761906591161 529.1665374055091 468.654647713921 1.3491920033350961 1.187171126209585 1.641943066335578 1.0909376807847602 1.1983344651117034 1.3687545125073322 1.2309690583079917 1.140356479701046 1.084329779162502 1.1291182963548163 1.0 8.872381379974712 -8.394583189206774 0.5376890412101344 1.0081826769195041 1.334442366215043 0.34701094444038394 0.13708935080383255 0.48003201559134645 0.30810364998898787 0.04005649054840595 0.05114832057221282 4.031037244376671e-09 8.394583189206774 0.32625968929553895 S(ph)NSAPLIHGLSDTSPVFQAEAPSAR ddPTM_A549_MK2206_60min_R1 2 SNSAPLIHGLSDTSPVFQAEAPSAR 25 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.5)NS(0.5)APLIHGLS(0.001)DTSPVFQAEAPSAR;S(0.5)NS(0.5)APLIHGLSDTSPVFQAEAPSAR 109.71 9.8515e-13 10955300.0 1726.0900000000001 1722.38 1727.5900000000001 1498.68 2129.7 1684.87 2027.88 1377.3200000000002 2268.2 2047.8600000000001 2350.6800000000003 True False 2017.4117931511773 1810.0417851202067 1972.5882395761403 1865.8566672783024 1816.4239511965304 1863.1618250738095 2396.3195466961106 1572.5593278655983 1754.4563215711125 1585.2470036994605 1766.9412805324387 1.141753727403586 1.0243927203821852 1.1163858478543969 1.0559811397445291 1.0280047057642918 1.054455994435976 1.3561964809458857 0.8899895798414611 0.9929341404273695 0.8971701669801797 1.0 10.78703838131887 S(ph)NSAPLIHGLSDTSPVFQAEAPSAR ddPTM_A549_PD325901_60min_R1 2 SNSAPLIHGLSDTSPVFQAEAPSAR 25 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.5)NS(0.5)APLIHGLSDTSPVFQAEAPSAR;S(0.5)NS(0.5)APLIHGLSDTSPVFQAEAPSAR 136.12 1.9134000000000003e-24 20682800.0 3804.7000000000003 3612.0 3359.0 4564.4 4235.7 4746.5 4383.4 5162.6 4124.0 4439.4 5286.2 True False 4190.950343127896 3916.395916315101 3586.9619393078824 4846.3326214954795 3938.1990443717236 4707.846077697058 4550.21268568852 5059.627893018649 3950.6826215963147 4159.095526367255 4636.030911982729 0.9039953405607295 0.8447734690880533 0.7737139823715751 1.0453624476422676 0.8494764420557848 1.0154906572190252 0.981488858050451 1.091370611861334 0.8521691715611737 0.8971242007073893 1.0 12.178674470595666 -6.252535540122029 24.98193876192654 0.9504721202372083 0.8412221899373918 0.3237539775802656 0.07846195632037262 701.9733498515722 1969556.6468587618 0.011614151648305449 0.03024446705918118 5.590677748594706e-07 6.252535540122029 -0.10924993029981644 S(ph)NSAWQIYLQR ddPTM_A549_PD325901_60min_R1 1 SNSAWQIYLQR 11 0 Q8N4C8-4;Q8N4C8 Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 S(0.918)NS(0.082)AWQIYLQR 160.18 2.2845e-13 9527900.0 4131.7 4054.7 4148.3 4673.1 5110.7 4347.6 4464.5 4316.7 5422.4 4899.5 6247.4 True False 4551.147142403221 4396.4037989708895 4429.8285837543635 4961.746773619871 4751.742062957853 4312.194587042184 4634.39899056814 4230.600032114358 5194.515384903941 4590.144733846097 5479.009405531554 0.8306514564126185 0.8024085146728026 0.8085090307167665 0.9055919430637481 0.8672629870210737 0.7870390919001955 0.845846146182793 0.7721468825812173 0.9480756466049518 0.8377690918383771 1.0 12.41969936490793 -8.895450626101722 5.146436168103709 0.9776191745486075 0.8294056079635949 0.3164773938399029 0.05561819402640535 0.0732785711494975 3.0138004092870156 0.0068727770425759775 0.007256395854929928 1.272182373228126e-09 8.895450626101722 -0.1482135665850126 S(ph)NSDESNFSEK ddPTM_A549_PD325901_60min_R1 1 SNSDESNFSEK 11 0 A0A087WWW9;O95999 A0A087WWW9 BCL10 B-cell lymphoma/leukemia 10 1 S(0.981)NS(0.019)DESNFSEK 165.64 6.1105e-14 13115000.0 5607.5 5780.7 6848.0 5535.4 7025.1 6465.7 6380.6 6535.6 7317.9 7359.4 7756.7 True False 6176.769271976682 6267.859876368417 7312.746460369272 5877.309086194479 6531.681211279322 6413.045482896 6623.417224598291 6405.242330920985 7010.354111682746 6894.726228036937 6802.67507377254 0.9079912247743518 0.9213816341947474 1.0749810010128653 0.863970279699853 0.960163632754117 0.9427240627178061 0.9736489179285703 0.9415769916185117 1.0305290250758714 1.0135316112067878 1.0 12.731886465841301 -8.757210468329511 24.99757962516501 1.014416485420693 0.9498727542129286 0.26321626919592 0.04941152039968042 101.7398723470301 601396.0077878863 0.007952198515037208 0.008864217230610713 1.7489988812053004e-09 8.757210468329511 -0.06454373120776435 S(ph)NSDVTISDIDAEDVLDQNAVNPNTGAALHR ddPTM_A549_MK2206_60min_R1 2 SNSDVTISDIDAEDVLDQNAVNPNTGAALHR 31 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.5)NS(0.5)DVT(0.001)ISDIDAEDVLDQNAVNPNTGAALHR;S(0.494)NS(0.494)DVT(0.011)IS(0.001)DIDAEDVLDQNAVNPNTGAALHR 86.413 1.5925999999999998e-07 39171000.0 1305.25 1264.1599999999999 1643.48 1248.78 2461.5 2087.3 1558.1 1593.15 2194.08 2408.61 2665.5 True False 1525.544289701334 1328.50034433607 1876.5501768235508 1554.7311560598641 2099.4166107293336 2308.176700562397 1841.186601626924 1818.983891317252 1697.124383225793 1864.5033281477047 2003.5827859424571 0.7614081636181255 0.6630623669044761 0.9365972746371186 0.7759755009716459 1.0478312278680302 1.1520246214716119 0.9189471054278676 0.9078656016010976 0.8470448015091573 0.930584621324079 1.0 10.96836640631058 -5.944175886411365 1.5888788808937315 0.9435477147285654 0.7060635005673379 0.4261380909843786 0.09993750048632423 0.35365367798839514 1.5935469284173058 0.015586720519636568 0.08658896127226408 1.1371666475322062e-06 5.944175886411365 -0.23748421416122745 S(ph)NSDVTISDIDAEDVLDQNAVNPNTGAALHR ddPTM_A549_PD325901_60min_R1 2 SNSDVTISDIDAEDVLDQNAVNPNTGAALHR 31 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.592)NS(0.403)DVT(0.005)ISDIDAEDVLDQNAVNPNTGAALHR;S(0.606)NS(0.38)DVT(0.014)ISDIDAEDVLDQNAVNPNTGAALHR 195.07 4.3558e-78 93787000.0 1930.29 2115.96 1998.3 2090.31 2529.8 2274.04 2126.83 2105.8 1863.55 1853.75 2388.2 True False 2126.2516197956074 2294.2793751622653 2133.9166547540767 2219.4237012615486 2352.115575336212 2255.5209721955575 2207.767679496032 2063.7981670318577 1785.2314741696914 1736.703908637045 2094.4665400471313 1.0151757400468002 1.095400347198021 1.0188353998274222 1.0596606146840644 1.123014156761503 1.0768952041338422 1.0540954640632985 0.9853574299570412 0.8523561680434001 0.8291867525360249 1.0 11.032367121411925 -8.391204168372202 3.4327450115679246 0.929952711172193 1.0657494296826922 0.647613330944212 0.05288598994529944 0.1459720041500569 3.192418455621924 0.009867173226628587 0.012004139348635465 4.062522989456902e-09 8.391204168372202 0.13579671851049913 S(ph)NSEDKLNSK ddPTM_A549_MK2206_60min_R1 1 SNSEDKLNSK 10 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 S(0.559)NS(0.438)EDKLNS(0.003)K 45.864 0.011562000000000001 22696000.0 3976.9 3202.8 3929.2 3369.6 4762.9 3504.8 4298.9 3802.8 5243.3 6052.4 7111.2 True False 4648.1034941300395 3365.8088397351307 4486.4196429376025 4195.152151267094 4062.2837193754776 3875.6756097020475 5079.95448413708 4341.858545586569 4055.7009218295607 4685.1586364256445 5345.29278086438 0.8695694856547037 0.6296771716199333 0.8393215913258375 0.7848311258618657 0.7599740343350418 0.725063297482335 0.9503603810670231 0.8122770301993547 0.758742521335514 0.8765017798834237 1.0 12.384053256355822 -11.191009922110718 0.5271762686086736 1.0827707485057907 0.7828214283066465 0.24656956908126426 0.08651882530496369 1.3137367741195425 0.3719824262690564 0.21386337237792424 0.01682980417352681 6.441545486674429e-12 11.191009922110718 -0.2999493201991442 S(ph)NSELEDEILCLEK ddPTM_A549_PD325901_60min_R1 2 SNSELEDEILCLEK 14 0 Q96PC5;Q96PC5-11;G3V599;Q96PC5-10;Q96PC5-9;Q96PC5-7;Q96PC5-14;Q96PC5-13;Q96PC5-6;Q96PC5-12;Q96PC5-5;Q96PC5-8;Q86UF2;A0A5F9ZHA4;G3V5K6;P0CG41;A4D2H0;A0A2R8YE69;Q8IX94;A4FU28 Q96PC5 MIA2;CTAGE6;CTAGE5;CTAGE8;CTAGE15;CTAGE4;CTAGE9 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 8;cTAGE family member 15;cTAGE family member 4;cTAGE family member 9 1 S(0.97)NS(0.03)ELEDEILCLEK;S(0.984)NS(0.016)ELEDEILCLEK 243.61 1.0236e-57 38035000.0 21054.5 22612.0 22589.0 21867.0 24350.0 21804.8 23792.0 25413.0 19222.4 23820.0 24546.0 True False 23191.937340496308 24517.5925968209 24122.02537869181 23217.67492643977 22639.740002939663 21627.22893815841 24697.417579481964 24906.117778887157 18414.54937569664 22316.001134853377 21526.997609914128 1.0773419387483651 1.1389229952591937 1.1205475940398935 1.0785375344561292 1.0516905521703162 1.004656075596818 1.147276458474066 1.1569712706901958 0.8554165197294364 1.036651814583557 1.0 14.393859499085478 -8.75825434255357 24.999999225751644 0.9317244663054158 1.095648818553005 0.46205431891287285 0.0612392139420374 43.88271445689682 344443.621511913 0.01136253759160822 0.012622576735429611 1.7448000195887156e-09 8.75825434255357 0.16392435224758928 S(ph)NSFIGVPNGEVEMPLK ddPTM_A549_PD325901_60min_R1 1 SNSFIGVPNGEVEMPLK 17 0 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 S(0.5)NS(0.5)FIGVPNGEVEMPLK 70.281 0.00047461 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)NSFNNPLGNR ddPTM_A549_PD325901_60min_R1 1 SNSFNNPLGNR 11 0 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.578)NS(0.422)FNNPLGNR 181.98 1.5734000000000002e-18 55261000.0 5487.4 6415.7 6108.2 6350.6 7138.5 5794.2 6609.8 6419.6 6075.9 6501.4 7325.3 True False 6044.476808389626 6956.37355490111 6522.739183590476 6742.8621387409485 6637.116386488079 5747.013956260889 6861.3395560213485 6291.556041921224 5820.551052511403 6090.900494464135 6424.334538902625 0.9408720501379922 1.082816206531076 1.0153174844946136 1.0495814154617067 1.0331212277780604 0.8945695342388827 1.0680233905118786 0.9793319454058067 0.9060161822621464 0.9480982750167543 1.0 12.649331305949634 -7.198580778008821 24.998098927430583 0.9621128632779111 1.0284911940525845 0.22082558959508847 0.054039067250543193 250.09798208674135 99460.56754919185 0.0083069243455872 0.014388014393743076 6.330226096697037e-08 7.198580778008821 0.06637833077467337 S(ph)NSFSDEREFSGPSTPTGTLEFEGGEVSLEGGK ddPTM_A549_MK2206_60min_R1 1 SNSFSDEREFSGPSTPTGTLEFEGGEVSLEGGK 33 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.467)NS(0.387)FS(0.13)DEREFS(0.011)GPS(0.003)T(0.001)PTGTLEFEGGEVSLEGGK 71.244 9.9777e-05 4437300.0 1484.0 1449.2 1447.0 1368.7 2228.0 1139.7 1801.3 1584.2 2460.7 2024.6 2170.4 True False 1734.4629196834155 1522.958089966327 1652.2063583759323 1704.0315614432777 1900.264151413753 1260.3022975283675 2128.572893595134 1808.765201409026 1903.3553789304433 1567.2414538542318 1631.42978000732 1.0631551176389789 0.9335112725228625 1.0127351962206543 1.0445019346377458 1.1647845188931312 0.7725139708573376 1.3047284778543047 1.1086993896855986 1.166679315441884 0.9606551707344706 1.0 10.67192117695525 -7.77202031146409 24.999595148424742 1.098845660828284 1.0058699269154148 0.1619116809408525 0.12274111522246821 347.41962908200486 820848.272364308 0.01849728892324267 0.025702294198920495 1.690361873472347e-08 7.77202031146409 -0.09297573391286917 S(ph)NSFSDEREFSGPSTPTGTLEFEGGEVSLEGGK ddPTM_A549_PD325901_60min_R1 2 SNSFSDEREFSGPSTPTGTLEFEGGEVSLEGGK 33 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.493)NS(0.374)FS(0.128)DEREFS(0.005)GPSTPTGTLEFEGGEVSLEGGK;S(0.41)NS(0.348)FS(0.151)DEREFS(0.025)GPS(0.025)T(0.025)PT(0.007)GT(0.008)LEFEGGEVSLEGGK 97.613 6.599299999999999e-10 40261000.0 3373.1 3072.2 3324.7 3166.8 4173.6 3898.8 3507.7 3239.8 3358.8 3499.0 3289.6 True False 3715.5346288550236 3331.1050758868378 3550.3341350452274 3362.406043675375 3880.4607341383567 3867.0494654430195 3641.1874429870886 3175.1796474260664 3217.641316541631 3278.0725428569253 2885.0000544925233 1.2878802629723323 1.1546291206128885 1.2306183944491251 1.1654786759672446 1.3450470228226519 1.3403984029120721 1.2621100083922112 1.1005821793596418 1.115300261963988 1.136246960464458 1.0 11.49435563078279 -8.807412253733373 0.999383599800114 1.035527064098734 1.2519348264536059 0.5179270712041893 0.07169676709971538 0.22242486865047167 0.4464366523800476 0.01624723312504546 0.016682014299131964 1.5580728011177946e-09 8.807412253733373 0.2164077623548719 S(ph)NSGLGGEVSGVMSKPNVDPQPWFQDGPK ddPTM_A549_MK2206_60min_R1 1 SNSGLGGEVSGVMSKPNVDPQPWFQDGPK 29 1 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 S(0.386)NS(0.386)GLGGEVS(0.114)GVMS(0.114)KPNVDPQPWFQDGPK 41.748999999999995 0.019093000000000002 2870000.0 468.39 780.06 435.53 655.13 1046.9 581.69 787.98 708.01 1277.7 1027.7 1228.1 True False 547.4427809639594 819.7617220943505 497.29470301552834 815.6368794099028 892.9023968200445 643.244049705428 931.1457662216698 808.3725856896885 988.3029900676348 795.5418562313517 923.128876164296 0.5930296355137817 0.8880252186461248 0.53870560856231 0.8835568905600326 0.9672564902640183 0.69680850238179 1.008684475444734 0.8756876819286245 1.0706013164425585 0.8617885072958799 1.0 9.85038826345718 -7.092387850647422 0.4925768173694159 1.0362687410926972 0.6576909551429692 0.3409057288960855 0.1340195149154209 0.6964960694957608 0.29071836667293655 0.028993877854743624 0.11373670510500193 8.083736512604722e-08 7.092387850647422 -0.378577785949728 S(ph)NSGLGGEVSGVMSKPNVDPQPWFQDGPK ddPTM_A549_PD325901_60min_R1 4 SNSGLGGEVSGVMSKPNVDPQPWFQDGPK 29 1 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 S(0.544)NS(0.433)GLGGEVS(0.022)GVMS(0.001)KPNVDPQPWFQDGPK;S(0.395)NS(0.349)GLGGEVS(0.128)GVMS(0.128)KPNVDPQPWFQDGPK;S(0.539)NS(0.435)GLGGEVS(0.017)GVMS(0.009)KPNVDPQPWFQDGPK;S(0.487)NS(0.487)GLGGEVS(0.013)GVMS(0.013)KPNVDPQPWFQDGPK 109.59 2.1829999999999998e-15 15146700.0 4062.7300000000005 4001.92 4072.1600000000003 3684.65 5437.05 5571.0 4149.12 3917.92 4295.450000000001 4931.84 5475.070000000001 True False 4475.175358776252 4339.175843139461 4348.521265487345 3912.242462052697 5055.170364804236 5525.631623059166 4307.017032085582 3839.774012051221 4114.92717432975 4620.44278072692 4801.6710993283 0.9320037266613864 0.9036803548969572 0.9056266402952201 0.8147668553558314 1.052793966981911 1.1507726182728633 0.8969829342722131 0.7996745159384953 0.8569781414027675 0.9622572402706357 1.0 12.229320871150305 -6.732471126115062 24.999619489899658 0.9418021756527044 0.891252935061962 0.0974290110871846 0.09393867017398666 607.7397280319414 524477.1019984505 0.01522799865920596 0.03169522949130451 1.8515219877695436e-07 6.732471126115062 -0.050549240590742395 S(ph)NSGRELTDEEILASVMIK ddPTM_A549_MK2206_60min_R1 4 SNSGRELTDEEILASVMIK 19 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.449)NS(0.449)GRELT(0.101)DEEILASVMIK;S(0.355)NS(0.355)GRELT(0.291)DEEILASVMIK;S(0.422)NS(0.422)GRELT(0.157)DEEILASVMIK;S(0.494)NS(0.494)GRELT(0.011)DEEILASVMIK 105.16 3.7374e-10 21054300.0 2857.65 3249.8 3269.54 3076.1900000000005 4202.29 3715.51 3509.29 3543.4399999999996 4704.28 4153.45 4369.95 True False 3339.9514571653076 3415.200938981903 3733.209935704525 3829.8566880954195 3584.1387077399004 4108.682802044072 4146.882568014473 4045.73347132988 3638.7680911914968 3215.182760303696 3284.770810515565 1.0167989335734149 1.0397075278581969 1.13652067406145 1.1659433516137159 1.09113813854713 1.2508278473770256 1.2624572024139469 1.2316638525824204 1.107769248174843 0.9788149450217056 1.0 11.681576997046024 -9.846474560090131 1.082224583254983 1.0174514179178735 1.1483815094811893 0.3588485220580663 0.07806012041915567 0.41015958952953 0.9786751301715255 0.026758166354240946 0.016312280088266032 1.4240506616122266e-10 9.846474560090131 0.1309300915633158 S(ph)NSGRELTDEEILASVMIK ddPTM_A549_PD325901_60min_R1 2 SNSGRELTDEEILASVMIK 19 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.452)NS(0.452)GRELT(0.096)DEEILASVMIK;S(0.434)NS(0.434)GRELT(0.131)DEEILASVMIK 95.13799999999999 6.1045e-07 71009000.0 3336.5 3288.1000000000004 3297.1000000000004 3772.6000000000004 4726.5 3824.7 3447.2 4052.6000000000004 4144.5 4093.0 4976.0 True False 3675.2190237985187 3565.1997265879545 3520.8610330729443 4005.624933803755 4394.526945539807 3793.552911275243 3578.385082380219 3971.7677137968044 3970.3210778869843 3834.5672814842524 4363.983545462916 0.842170687746868 0.8169599379664414 0.8067997957355874 0.9178826849538116 1.0069989723285382 0.869286712874816 0.8199813416117354 0.9101243559742831 0.9097928616194695 0.8786850916225202 1.0 12.091429946606878 -14.999999998127175 0.0740668747734719 1.4316309134072178 0.734039555152871 0.08643549028573572 0.06271329879431514 122.39074756327291 0.6751082106169473 8.856677024739277 1.068800270769856 1.00000000431234e-15 14.999999998127175 -0.6975913582543468 S(ph)NSKSKPNLPSESR ddPTM_A549_PD325901_60min_R1 3 SNSKSKPNLPSESR 14 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 S(0.54)NS(0.452)KS(0.007)KPNLPS(0.001)ESR;S(0.555)NS(0.441)KS(0.004)KPNLPSESR;S(0.491)NS(0.491)KS(0.013)KPNLPS(0.004)ES(0.001)R 71.085 0.00067331 58769400.0 6167.5 5946.3 5922.0 6905.799999999999 6850.900000000001 7763.000000000001 6755.3 7592.400000000001 8192.5 6839.5 8067.4 True False 6793.620059726473 6447.415569541661 6323.902531878918 7332.355581790265 6369.7164183219475 7699.780701814451 7012.376638141999 7440.963625877421 7848.1977151861765 6407.652802763624 7075.160943462122 0.9602071407300198 0.9112747570073956 0.8938174809609932 1.0363517721198705 0.9002927946406578 1.0882834699229726 0.9911260951062689 1.0517023832162182 1.1092606624642776 0.9056547058035032 1.0 12.788547250937876 -7.113258768510353 1.1368580776858017 1.051481795140998 0.9302335565104334 0.16145840944890488 0.06834623527645488 0.33111292153487226 0.8409124706544892 0.009278731232610487 0.0218275876864436 7.704442734447697e-08 7.113258768510353 -0.12124823863056466 S(ph)NSLPHSAVSNAGSK ddPTM_A549_MK2206_60min_R1 2 SNSLPHSAVSNAGSK 15 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.612)NS(0.387)LPHS(0.001)AVSNAGSK;S(0.498)NS(0.498)LPHS(0.005)AVSNAGSK 128.74 9.6247e-10 18267400.0 4618.2 5094.0 4264.5 4089.8999999999996 6103.1 4575.5 4362.0 4346.200000000001 8478.3 8182.8 8816.3 True False 5397.639255850375 5353.2628417668175 4869.270224805916 5091.92568360259 5205.342074727682 5059.676373028908 5154.518937357451 4962.287159679277 6557.978587063024 6334.299796798582 6626.969392498401 0.814495878306062 0.807799542250279 0.7347657634148475 0.7683641468702948 0.7854785146012636 0.7634977730176876 0.7778093774195283 0.74880188299896 0.9895893882483487 0.9558365855693983 1.0 12.69413354082115 -8.766421246419219 24.99796206464116 0.9950838976310676 0.7746917852244799 0.9313485154398117 0.024919865191555333 16.084986811840803 80710.86230450014 0.003799333594278308 0.00410655517009369 1.7122956508019618e-09 8.766421246419219 -0.22039211240658774 S(ph)NSLRRDS(ph)PPPPAR ddPTM_A549_MK2206_60min_R1 2 SNSLRRDSPPPPAR 14 2 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 2 S(0.5)NS(0.5)LRRDS(0.999)PPPPAR;S(0.807)NS(0.247)LRRDS(0.946)PPPPAR 67.449 0.0011844000000000002 57694000.0 2287.21 2974.27 2647.79 2256.29 3222.3 2592.4799999999996 1739.1799999999998 2271.8599999999997 3863.34 3695.0 3882.99 True False 2673.235131084303 3125.6476388656843 3023.2864365198398 2809.081151288708 2748.3039385550005 2866.8145128510514 2055.16649368944 2593.9031122794536 2988.2996584862613 2860.2969337110476 2918.736417927857 0.9158878186685159 1.0708906839503936 1.0358203015352128 0.9624305689388019 0.9416074441234217 0.9822108276862948 0.7041288418734624 0.8887075572658194 1.023833341075653 0.9799778137354731 1.0 11.511128216050993 -4.147209048979237 24.15477649722877 0.9782330661303078 0.9655293460709329 0.0 0.09681275391041165 0.0 0.0 0.013293626771712827 0.0 7.125099787078375e-05 4.147209048979237 -0.012703720059374923 S(ph)NSLRRDS(ph)PPPPAR ddPTM_A549_PD325901_60min_R1 3 SNSLRRDSPPPPAR 14 2 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 2 S(0.708)NS(0.401)LRRDS(0.891)PPPPAR;S(0.788)NS(0.236)LRRDS(0.976)PPPPAR;S(0.504)NS(0.504)LRRDS(0.992)PPPPAR 74.657 0.00075226 169233000.0 5653.37 5878.2 5568.7 5744.6 6907.7 6472.5 5988.62 5813.89 6545.9 6555.4 6515.5 True False 6227.29596060897 6373.5765435446965 5946.625469313429 6099.430895066806 6422.526982271303 6419.790105950534 6216.520211198605 5697.927403041531 6270.79858698043 6141.4909252484385 5714.134805157477 1.089805573888163 1.1154053519689489 1.040686940732674 1.067428596462507 1.1239719049810382 1.1234929389758437 1.0879197679389159 0.9971636297237304 1.0974187345598703 1.0747892961337275 1.0 12.480319356714826 -12.180354442608769 0.35754429472488897 0.8933088467992548 1.088939925095503 0.037281472935996374 0.04203084309129933 5.457727188772111 0.40069109288034416 0.48317551493393757 0.011404100962557373 6.601544534204083e-13 12.180354442608769 0.19563107829624815 S(ph)NSLSTPRPTR ddPTM_A549_MK2206_60min_R1 2 SNSLSTPRPTR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.487)NS(0.399)LS(0.108)T(0.006)PRPTR;S(0.583)NS(0.407)LS(0.006)T(0.004)PRPTR 50.088 0.0075726 44976000.0 2163.49 2606.8999999999996 2244.2 2040.71 2551.2 2232.4 1657.5 1942.08 2972.1000000000004 3420.8 3250.2 True False 2528.634219747895 2739.5800750298217 2562.4613057824918 2540.684041610952 2175.9218595542034 2468.631086252811 1958.6462949724835 2217.37578737056 2298.9240954684337 2648.038904151219 2443.0856390433964 1.0350166115085493 1.1213606396960032 1.0488626615585352 1.039948825783189 0.8906449388348897 1.0104562225740958 0.8017100439178227 0.9076127958571217 0.9409920220269438 1.0838911505321087 1.0 11.254488720865591 -6.598267648174334 6.035518284453377 0.9517917456705196 1.0691991386474515 0.372430975075405 0.07128995615069451 0.15027020593936385 9.217951956431248 0.009015588632382792 0.018974986725135833 2.521926074061901e-07 6.598267648174334 0.11740739297693192 S(ph)NSRLEDQVIGVALQASK ddPTM_A549_MK2206_60min_R1 2 SNSRLEDQVIGVALQASK 18 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 S(0.5)NS(0.5)RLEDQVIGVALQASK;S(0.5)NS(0.5)RLEDQVIGVALQASK 85.35 1.9215e-05 2591700.0 873.25 961.12 1191.28 908.79 1009.54 880.39 1113.93 896.78 1326.54 967.67 1570.6100000000001 True False 1020.6332510872929 1010.0369027245632 1360.2214171431094 1131.443590797133 861.0380033295518 973.552285444415 1316.3166620565307 1023.9013112735682 1026.0808080490879 749.0726749239972 1180.5841903691921 0.8645154317779917 0.8555399191045449 1.1521596072853908 0.9583760311437918 0.7293321478922127 0.8246360516990879 1.1149705991276169 0.8672836038515592 0.8691297210478586 0.6344932288901373 1.0 10.20528521203735 -11.01014551582375 1.304491657319092 0.9998201185050298 0.9126876915513462 0.0 0.16002648795792712 1.0939175030458665 3.3260410038640202 0.08349141708874414 0.019119814072293146 9.769098401940007e-12 11.01014551582375 -0.08713242695368362 S(ph)NSRLEDQVIGVALQASK ddPTM_A549_PD325901_60min_R1 2 SNSRLEDQVIGVALQASK 18 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 S(0.605)NS(0.395)RLEDQVIGVALQASK;S(0.5)NS(0.5)RLEDQVIGVALQASK 151.94 5.7914e-18 5766500.0 2188.01 2334.81 2009.48 2681.8 2838.7 2097.4 2307.2 2460.1 2459.2 2503.1 2111.4 True False 2410.1351644721703 2531.5726327164075 2145.8553967848793 2847.448695190295 2639.31950498336 2080.3194697907543 2395.001758548284 2411.0313755888837 2355.8483760983618 2345.0538388182813 1851.7111852673613 1.3015718561554082 1.3671530705534318 1.1588499404538877 1.5377391019967097 1.4253408015150477 1.1234578514955533 1.2933991961616191 1.3020558469223507 1.272254763508495 1.2664252705692265 1.0 10.854643381059732 -10.877285148584747 0.3588478892933113 0.8675047573035549 1.338192864734747 0.09365247279214439 0.13279261869075512 1.7597818535415526 0.26226566169315285 0.32629686231407407 0.037922442246075334 1.3265232046171624e-11 10.877285148584747 0.47068810743119205 S(ph)NSSEALLVDR ddPTM_A549_MK2206_60min_R1 2 SNSSEALLVDR 11 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 S(0.999)NS(0.001)SEALLVDR;S(0.996)NS(0.003)S(0.001)EALLVDR 106.32 0.00015915 9024700.0 558.36 867.23 560.34 760.78 1004.95 727.24 570.56 654.85 1047.11 1194.77 1061.8600000000001 True False 652.5975174086474 911.3683027611777 639.8046377694332 947.1711341527115 857.1231862492153 804.196054097158 674.2233665517351 747.6769928940163 809.9412568910703 924.8706271961979 798.1708561548897 0.8176163190829495 1.1418210721844764 0.8015885732180571 1.1866771717469315 1.0738592866924792 1.0075487571311412 0.8447105796367215 0.9367380268629166 1.0147467182563936 1.1587376563104195 1.0 9.640553792041077 -8.568409478918902 0.002777532301653407 1.9889672085766998 0.0001668209354714028 0.023948864905115275 0.1286801272664798 107766.33589328476 242.5183827665963 86794.32538616474 86848.25284603045 2.7014101112898115e-09 8.568409478918902 -1.9888003876412284 S(ph)NSSEALLVDR ddPTM_A549_PD325901_60min_R1 2 SNSSEALLVDR 11 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 S(0.987)NS(0.006)S(0.006)EALLVDR;S(0.998)NS(0.002)SEALLVDR 93.348 0.00029073 11122800.0 534.25 654.3399999999999 931.5799999999999 771.8 1152.33 656.51 585.88 950.23 889.06 828.76 892.53 True False 588.486666705937 709.4835282064292 994.8026208456201 819.4723331150228 1071.3943161226875 651.1636002251965 608.1759840058377 931.2769172089862 851.6958999894324 776.431952162934 782.7544682138291 0.7518151484319308 0.9063934567188136 1.2708999580873228 1.046908534402851 1.368748898447692 0.8318874266040149 0.7769690352501432 1.1897433422948975 1.0880754241274675 0.9919227340019885 1.0 9.612416028528685 -5.527252468801925 24.892351153925798 1.055360973026253 0.7904596410190531 0.24878948109071963 0.1651155208178633 97.72330644995775 556182.9687450198 0.021675446416955887 0.0846528848337319 2.969939012483478e-06 5.527252468801925 -0.2649013320071999 S(ph)NSSSEAVLGQEELSAQAK ddPTM_A549_MK2206_60min_R1 1 SNSSSEAVLGQEELSAQAK 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.439)NS(0.439)S(0.099)S(0.023)EAVLGQEELSAQAK 115.87 1.9182e-14 3348600.0 742.96 748.05 910.98 850.51 1229.4 1075.9 1105.8 1284.1 1591.1 1101.5 862.58 True False 868.353484371962 786.1225498201153 1040.1706623035982 1058.8849881808446 1048.556888576332 1189.751023875381 1306.7095462929547 1466.1251073913204 1230.718390464595 852.6703849750256 648.3775800030933 1.3392712998617555 1.2124456089557645 1.6042668568191945 1.633130171120033 1.6172010274805146 1.8349663229714157 2.0153527614059707 2.261221165889675 1.8981507510773636 1.3150830800950237 1.0 9.3406903951003 -5.767100305297901 24.381372740940442 1.5904500176913416 1.2758584323196027 0.13649046954015853 0.33305377275363357 199.14761150437496 857746.4818997603 0.06185689857814028 0.20052438683241197 1.7096204130213128e-06 5.767100305297901 -0.3145915853717389 S(ph)NSWVNTGGPK ddPTM_A549_MK2206_60min_R1 1 SNSWVNTGGPK 11 0 Q96N67-2;Q96N67-6;Q96N67;A0A0U1RRC1;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.867)NS(0.132)WVNT(0.001)GGPK 150.26 9.6784e-12 22852000.0 6677.3 6869.2 4562.4 5169.5 9191.7 7902.4 6555.5 7528.3 9261.6 10598.0 10295.0 True False 7804.2649956887335 7218.812939274564 5209.416924294647 6436.027732067672 7839.613106171364 8738.626722811416 7746.54949423356 8595.459579451819 7163.862387736091 8203.904439369338 7738.467372454545 1.0085026685604954 0.9328478872922931 0.6731845821096077 0.8316928174921341 1.0130705123958852 1.1292451466445395 1.0010444085876467 1.110744436301144 0.9257469267411027 1.0601458976969445 1.0 12.917832149080361 -6.761939996085981 24.999708344177687 0.993592161764836 0.8531940095290924 0.3790410036396077 0.09768501953484081 13.012039556945528 649851.0848766615 0.014609863183928378 0.02885744348912 1.7300553742778467e-07 6.761939996085981 -0.1403981522357436 S(ph)NTPILVDGKDVMPEVNK ddPTM_A549_PD325901_60min_R1 1 SNTPILVDGKDVMPEVNK 18 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.546)NT(0.454)PILVDGKDVMPEVNK 41.49100000000001 0.01991 80944000.0 5274.2 5217.8 5850.5 6146.2 7171.6 7217.1 6147.0 6489.1 9178.3 6279.9 7097.8 True False 5809.632901339173 5657.522317870693 6247.550111914491 6525.836814967035 6667.891556676881 7158.326330421883 6380.927448767464 6359.669809899527 8792.567969398016 5883.38604226556 6224.815596661304 0.9333020088908633 0.9088658499225455 1.003652239154744 1.0483582547356398 1.0711789695831668 1.1499660061032602 1.0250789520881376 1.0216639691801557 1.4125025605760808 0.9451502539964605 1.0 12.60381538421666 -6.632962338208592 0.6663836329984718 1.1779174659802525 0.902320731850437 0.0505110446868684 0.12886043381150133 1.0369270574005771 0.7376128607675723 0.02923278981061448 0.1546270187836794 2.3282931572812242e-07 6.632962338208592 -0.27559673412981545 S(ph)NVCINGNHVYLEQPEAK ddPTM_A549_MK2206_60min_R1 1 SNVCINGNHVYLEQPEAK 18 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 S(1)NVCINGNHVYLEQPEAK 143.38 3.2940000000000005e-17 8269500.0 2542.1 2752.2 2457.6 2770.2 3629.6 3519.7 2972.8 3015.4 4807.5 3795.7 4316.5 True False 2971.1443316221125 2892.275224403346 2806.1246346542443 3448.899124359003 3095.690648102046 3892.1523178122306 3512.9192794535174 3442.8421842752005 3718.608925999964 2938.248733771862 3244.5939206605203 0.9157214752523668 0.8914136237469584 0.8648615830738491 1.0629678809411351 0.9541072700622698 1.199580721959771 1.08269921147432 1.0611011018520067 1.1460937845938346 0.9055828882197087 1.0 11.66382221271427 -6.436161136302397 1.7496404208607923 1.0761755373891293 0.8877086863563228 0.3972370704927368 0.08217976385645698 0.21501584266145826 1.2738984008053433 0.010617981139234168 0.032241210397686015 3.663016405163644e-07 6.436161136302397 -0.18846685103280647 S(ph)NVCINGNHVYLEQPEAK ddPTM_A549_PD325901_60min_R1 1 SNVCINGNHVYLEQPEAK 18 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 S(1)NVCINGNHVYLEQPEAK 169.88 9.420399999999999e-31 8144900.0 3705.1 4938.0 4852.5 4794.6 5132.3 3854.8 4895.9 4817.1 4633.9 5215.0 5370.4 True False 4081.239024449538 5354.142589912508 5181.819830452963 5090.7515526733505 4771.824953473809 3823.407786854867 5082.216153639277 4721.019161558157 4439.153297821327 4885.72401000253 4709.874845770505 0.8665281261378982 1.1367908416336283 1.1002032962948618 1.0808676916850295 1.013153238617144 0.8117854321093712 1.0790554568988466 1.0023661596438511 0.942520436993716 1.0373362711304184 1.0 12.201473008664648 -7.000007260377558 24.994797003519693 0.9710269886671606 1.0552615769625642 0.10284433457000308 0.08995044819812535 0.349477281613561 1199501.4181490343 0.011920247630122944 0.022364406974954017 9.999832825026048e-08 7.000007260377558 0.08423458829540353 S(ph)NVDIPR ddPTM_A549_MK2206_60min_R1 2 SNVDIPR 7 0 Q9BZ72-3;Q9BZ72;Q9BZ72-2 Q9BZ72-3 PITPNM2 Membrane-associated phosphatidylinositol transfer protein 2 1 S(1)NVDIPR;S(1)NVDIPR 105.4 0.0098228 14092600.0 2628.4 2391.3999999999996 2517.3199999999997 2101.2 4066.8999999999996 2327.3 2227.11 2931.0 4208.0 3162.2 3566.5 True False 3072.009661789684 2513.112045504743 2874.313828657154 2615.994094326453 3468.664397389852 2573.5733412632917 2631.747058821219 3346.4782258110413 3254.894718795184 2447.8568237567188 2680.839619607493 1.1459132576679327 0.9374346854336226 1.0721692590763738 0.9758114865183414 1.2938724017730332 0.9599878047311512 0.9816876174064222 1.2482948257460496 1.2141325780882555 0.913093348014274 1.0 11.388469197784163 S(ph)PAAAAAGAGER ddPTM_A549_MK2206_60min_R1 2 SPAAAAAGAGER 12 0 A8CG34;Q96HA1 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 1 S(1)PAAAAAGAGER;S(1)PAAAAAGAGER 107.17 0.00013488 34692000.0 2117.9300000000003 2179.58 2322.8999999999996 2293.8 2512.7 2320.9 2027.4699999999998 1910.3400000000001 2969.0 3298.7 3203.4 True False 2475.3848055829494 2290.5113122611147 2652.3221491855234 2855.7811029725967 2143.085158553563 2566.4960975112654 2395.8350550032346 2181.1365451708853 2296.526240518752 2553.5213789533527 2407.907370657689 1.0280232685640351 0.9512456086030796 1.1015050585027593 1.1860012298531968 0.8900197676492043 1.0658616393579374 0.9949863870173888 0.9058224463905087 0.9537435984887928 1.0604732599227398 1.0 11.233564179059051 -6.778981621402871 24.999992880345737 0.9750793580311772 1.0609340826062597 0.23266586256580624 0.07350959622908439 250.84706685802539 357489.4971577776 0.009931853527638375 0.018799944405289058 1.6634830446282205e-07 6.778981621402871 0.08585472457508248 S(ph)PAAAAAGAGER ddPTM_A549_PD325901_60min_R1 1 SPAAAAAGAGER 12 0 A8CG34;Q96HA1 A8CG34;Q96HA1 POM121C;POM121 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121 1 S(1)PAAAAAGAGER 63.966 0.0067201000000000006 21988000.0 848.8 1120.9 1025.3 1228.2 1245.0 1045.8 1212.8 1089.8 1043.6 998.72 1217.1 True False 934.9695511464655 1215.362176798892 1094.883023629763 1304.0631245554182 1157.5554950168328 1037.2833515338855 1258.9537676696243 1068.0630840684385 999.7411212167584 935.6606487573787 1067.4044158325783 0.8759281274072553 1.138614529574441 1.0257433896558799 1.2217141930579756 1.0844582220637868 0.9717810195911563 1.1794534002256651 1.0006170746776857 0.9366095046898956 0.8765755836109793 1.0 10.05989116951634 -8.506997416373276 24.466831684295848 0.9699891571043465 1.0755521646965074 0.25880883491182805 0.0953725010356176 577.1050691252623 889091.4401701974 0.014120864847105646 0.016813604606568496 3.111734848824992e-09 8.506997416373276 0.10556300759216086 S(ph)PAAER ddPTM_A549_PD325901_60min_R1 1 SPAAER 6 0 H7C3M7;O94887-3;O94887-2;O94887 H7C3M7;O94887-3 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 S(1)PAAER 69.628 0.051863 7074000.0 525.32 789.76 410.73 539.09 562.52 339.93 314.29 283.05 429.69 888.62 850.59 True False 578.6500996798553 856.3158468629605 438.60460772013306 572.3883649377792 523.0105357886497 337.1617227834325 326.25047793608724 277.4043457015705 411.6316235872259 832.5123815471622 745.972822334264 0.7756986345282257 1.147918290351941 0.5879632536044297 0.76730458241989 0.7011120514445406 0.45197587993675353 0.43734901348711225 0.371869238926868 0.551805121129168 1.1160089974083809 1.0 9.542979260204548 -5.77220502092063 24.98020034768609 0.6935804149799969 0.9618085068742945 0.1841793430372063 0.2346923209113552 266.2752816923625 617860.881123054 0.03483196789913156 0.10986818751006659 1.6896430998080212e-06 5.77220502092063 0.26822809189429764 S(ph)PAAPR ddPTM_A549_PD325901_60min_R1 1 SPAAPR 6 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 S(1)PAAPR 91.626 0.03706 4505300.0 863.35 930.55 800.92 878.32 815.75 592.16 826.59 708.84 929.59 994.4 1219.4 True False 950.9966564353219 1008.9707142655087 855.2752475232121 932.5718315905505 758.4545341847241 587.3376452900219 858.0463347774037 694.7016301257775 890.5225650363033 931.6134142946343 1069.4215304134802 0.8892626802338919 0.9434733503779386 0.7997550294246734 0.8720339034412199 0.7092194355685694 0.5492106045994175 0.8023462314674452 0.6496050531703608 0.8327142662743964 0.8711377018325375 1.0 10.062614912245381 -9.960095343551984 0.9524376826846088 0.9797946264507326 0.7798555437088356 0.19562893346819932 0.11226342412152075 0.42021151212062663 0.7745610653148524 0.04254468422977426 0.02248775678270375 1.0962375054236957e-10 9.960095343551984 -0.19993908274189698 S(ph)PAFALK ddPTM_A549_MK2206_60min_R1 2 SPAFALK 7 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 S(1)PAFALK;S(1)PAFALK 88.37 0.012792 61753000.0 10497.6 11547.0 10632.7 9900.599999999999 20221.4 14654.7 12714.2 13491.3 20772.4 15746.099999999999 16867.199999999997 True False 12269.33823832118 12134.69297877532 12140.576742711663 12326.247444454815 17246.8588471266 16205.450626997439 15024.205564729502 15403.73309037342 16067.484566706533 12189.045073858608 12678.608728962154 0.9677196055663375 0.957099729014876 0.9575637991713202 0.97220820580239 1.3603116253385947 1.2781726270942337 1.185004276566184 1.2149387539017729 1.2672908290010607 0.9613866422121522 1.0 13.630108821402915 -6.574978585346515 23.862301857673483 1.1655030861314966 0.9611683441022603 0.4716355522641147 0.1099408842336819 50.61963817144556 23184.091123067134 0.017794752987674457 0.03704274352999971 2.66085626089012e-07 6.574978585346515 -0.2043347420292363 S(ph)PAFALK ddPTM_A549_PD325901_60min_R1 2 SPAFALK 7 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 S(1)PAFALK;S(1)PAFALK 97.635 0.011616 85016000.0 22835.0 22778.0 22772.0 21533.0 26488.0 22332.0 23287.0 24324.0 24814.0 25999.0 26701.0 True False 25153.19238976147 24697.581999397942 24317.44485916022 22863.044505008813 24627.57425863926 22150.13559615099 24173.199528135356 23838.83873819116 23771.15387300944 24357.418702982894 23416.946271584668 1.0741448563805116 1.0546884172240367 1.0384549965282306 0.9763461144697595 1.051698798511727 0.9459019694224226 1.0322951271177645 1.0180165450146008 1.0151261226513804 1.04016204420896 1.0 14.515265330448846 -5.912815502541071 2.750458363574265 1.0069724552004997 1.0665086253788134 0.35298626494326224 0.02848681089425327 0.17358642753898565 2.602415335466293 0.003306380568663663 0.012903379208846273 1.2223188167053207e-06 5.912815502541071 0.059536170178313697 S(ph)PAFTSR ddPTM_A549_MK2206_60min_R1 1 SPAFTSR 7 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(1)PAFTSR 92.838 0.012225 12878000.0 1873.0 1749.3 1525.4 1764.0 2752.1 2140.5 1591.2 2271.0 2440.8 2877.6 2441.2 True False 2189.116609546521 1838.3318981355885 1741.724657267898 2196.1800791889705 2347.2697356848257 2367.006289251093 1880.3004431735856 2592.9212046458147 1887.9626971566752 2227.5481614200044 1834.9826663075323 1.1929903479424138 1.001825211697937 0.9491777166335342 1.1968396865613244 1.2791781518068233 1.2899338684294672 1.0246965694543833 1.4130494267084572 1.0288722241479002 1.2139341707801616 1.0 10.841550719746774 -8.963173713090507 24.999962187986785 1.01273744637713 1.1633326966294097 0.012307663137064329 0.14321570810018083 185.28267222069059 125781.99183048685 0.02264252008527252 0.024038890089209015 1.0884946201843957e-09 8.963173713090507 0.15059525025227982 S(ph)PAFTSR ddPTM_A549_PD325901_60min_R1 2 SPAFTSR 7 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(1)PAFTSR;S(1)PAFTSR 88.13600000000001 0.011187 15697000.0 4407.8 3960.6 3842.7 3908.3 4350.0 4055.8 4356.6 3993.0 4322.5 4867.4 4976.8 True False 4855.276611149145 4294.373661726908 4103.488730032274 4149.706814606692 4044.471006685317 4022.770909496205 4522.392797022996 3913.356482552096 4140.840356898654 4560.071533324317 4364.6851505345285 1.1124001946748747 0.9838908222740855 0.9401568700848293 0.9507459694082382 0.9266352250379398 0.92166348104251 1.0361326512793605 0.8965953665805289 0.9487145610930353 1.0447652868537058 1.0 12.091661872504151 -5.272048249997297 3.7050349070608757 0.9636739820698006 1.126770030471779 0.4807543920783194 0.04446736582794025 0.14534600773653067 3.7241925888008685 0.005298438245802057 0.06386617162879832 5.345049727428892e-06 5.272048249997297 0.16309604840197833 S(ph)PAGASGHR ddPTM_A549_MK2206_60min_R1 2 SPAGASGHR 9 0 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 S(1)PAGASGHR;S(1)PAGASGHR 50.354 0.0087036 5171100.0 458.3 139.44 245.084 125.18 454.69 391.59999999999997 386.35 479.5 566.8100000000001 376.483 444.22999999999996 True False 535.6498356407749 146.5369004036052 279.84059650048863 155.84910561954376 387.80570332420103 433.0388520769581 456.54479400459707 547.4705934071632 438.42844000957666 291.4352288212007 333.9154308757148 1.6041481947569736 0.43884435055697396 0.8380582944806971 0.466732265744112 1.1613889849509367 1.2968518733659171 1.3672467690614922 1.6395486485047612 1.3129924509920663 0.8727815544699238 1.0 8.383338954435041 -6.9333226017505165 11.674672370532322 1.2201972242833667 0.8087691614991548 0.24136381269857088 0.3395818768696477 0.6641517033377771 113.94325173815436 0.0464996435033414 0.08790793929310702 1.1659432117267434e-07 6.9333226017505165 -0.41142806278421196 S(ph)PAGGESATVAAK ddPTM_A549_MK2206_60min_R1 2 SPAGGESATVAAK 13 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 S(1)PAGGESATVAAK;S(1)PAGGESATVAAK 174.02 7.6189e-22 51959000.0 8837.1 8480.8 7731.700000000001 7895.7 13700.4 11605.6 8719.0 11790.1 14018.7 11137.5 12425.0 True False 10328.586433648461 8912.43649557441 8828.171320701587 9830.146854451443 11685.089308810131 12833.696888826202 10303.129439435948 13461.382780666936 10843.486833263793 8621.531014670309 9339.52958744514 1.1059000709771165 0.954270385047566 0.94524796329882 1.0525312610675621 1.2511432400747526 1.3741266911427925 1.1031743454494911 1.4413341330127252 1.1610313701281463 0.9231226191798764 1.0 13.189134170897756 -6.531465812097849 24.051900544091257 1.1413001895779038 0.9973587222695932 0.2008965869372914 0.14834158935220848 175.65392493681694 491996.123070831 0.02215982323937145 0.04619653827391052 2.9412652226615023e-07 6.531465812097849 -0.1439414673083106 S(ph)PAGGESATVAAK ddPTM_A549_PD325901_60min_R1 2 SPAGGESATVAAK 13 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 S(1)PAGGESATVAAK;S(1)PAGGESATVAAK 119.73 1.1665e-05 53084000.0 18131.6 17647.1 16482.3 16592.5 19858.3 17004.4 16767.6 17822.0 17842.3 19874.0 20672.4 True False 19972.306684221545 19134.28304950284 17600.887994121564 17617.3810406984 18463.521515415872 16865.92180419086 17405.70019358279 17466.526228911476 17092.450179269606 18619.152248281946 18129.825853140588 1.101627056211452 1.0554035766531233 0.97082498953362 0.971734708507781 1.0184058945175956 0.9302859244656901 0.9600588739559041 0.9634138998574986 0.9427807149238955 1.0269901321228958 1.0 14.146077446825833 -5.6231401820920475 2.761441231970481 0.9706676188850678 1.0981262903125386 0.6639675236854783 0.028651329758126492 0.10942936253188748 1.5587820706771114 0.003746887975479817 0.021829639075541366 2.3815506255232607e-06 5.6231401820920475 0.1274586714274708 S(ph)PAGPAATPAQAQAAST(ph)PR ddPTM_A549_MK2206_60min_R1 2 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 S(1)PAGPAAT(0.36)PAQAQAAS(0.099)T(0.541)PR;S(0.999)PAGPAAT(0.01)PAQAQAAS(0.198)T(0.793)PR 66.874 0.00263 3827900.0 635.76 719.52 717.47 736.3299999999999 1157.58 690.46 672.46 968.73 1289.42 1060.6599999999999 1147.6599999999999 True False 743.0607451603297 756.1404946815977 819.2180345155356 916.7308830551095 987.301515436953 763.5240189097453 794.6372775367702 1106.0504441112014 997.3684287806285 821.0561693396378 862.664348195356 0.8613555744070911 0.8765176122826914 0.9496370589897362 1.0626738950935641 1.1444793302311969 0.8850765891821002 0.9211430601010758 1.282133017812774 1.1561488901993755 0.9517678237859718 1.0 9.752655523931834 -6.0592599837919146 2.372984117309478 1.0705312568938639 0.8668761204402394 0.2847078476393311 0.11021055574398807 0.2676356758031546 2.9199978930921975 0.016164693272270676 0.05829232059493786 8.724489337337613e-07 6.0592599837919146 -0.20365513645362443 S(ph)PAGPAATPAQAQAAST(ph)PR ddPTM_A549_PD325901_60min_R1 2 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 S(1)PAGPAAT(0.008)PAQAQAAS(0.203)T(0.789)PR;S(1)PAGPAAT(0.032)PAQAQAAS(0.204)T(0.764)PR 139.11 3.6879e-17 6047700.0 1072.2 886.39 972.03 1200.0700000000002 1235.0700000000002 1123.81 862.84 814.94 1334.6100000000001 1222.45 1026.31 True False 1181.0489546880785 961.0891960859757 1037.9978010912305 1274.195598343283 1148.3229439601926 1114.6580639580184 895.6758483641645 798.6853823919381 1278.520982931293 1145.2642983753783 900.0803763151205 1.3121594312757134 1.0677815241574558 1.153227898758038 1.4156464598859158 1.2758004442462834 1.238398362290007 0.9951065170768549 0.8873489561695724 1.4204520135918168 1.2724022526344005 1.0 9.813910028254352 -7.580394713402322 24.99996243595254 1.1594860177560864 1.241238584257816 0.11137761284439796 0.1600692881584037 250.65635737084824 108949.38624020114 0.030370181853790174 0.04504626252304527 2.6278785293913174e-08 7.580394713402322 0.08175256650172957 S(ph)PAGPAATPAQAQAASTPR ddPTM_A549_MK2206_60min_R1 2 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(1)PAGPAATPAQAQAASTPR;S(1)PAGPAATPAQAQAASTPR 142.94 1.3839e-20 9370100.0 2253.1000000000004 2670.2 2819.1 2375.1 2928.2 2151.3 2203.2 2274.8 2996.3 3261.0 3247.5 True False 2633.368196993739 2806.101774653661 3218.8907704890053 2956.9996066222893 2497.4656589630827 2378.9491380826353 2603.4929213172713 2597.259866282827 2317.6428341078936 2524.3378351371384 2441.0561235596074 1.078782323592666 1.1495441450816521 1.3186467690858088 1.2113607622877267 1.0231086597555232 0.9745573299697812 1.0665436555062875 1.0639902299728525 0.9494426661228298 1.0341170818539345 1.0 11.25328974989599 -6.817417792098885 4.949965844228648 0.9908726495646414 1.1962646358511426 0.6100593493489022 0.06505307089043455 0.08962795717726321 4.519355577988695 0.009780926008097676 0.01910863699063309 1.5225873172045112e-07 6.817417792098885 0.20539198628650124 S(ph)PAGPAATPAQAQAASTPR ddPTM_A549_PD325901_60min_R1 1 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(1)PAGPAATPAQAQAASTPR 146.78 9.0324e-21 9134200.0 1884.8 1374.7 1685.7 2019.4 1784.9 1246.3 1726.4 1771.0 1922.6 2030.7 2015.5 True False 2076.1435084835753 1490.550793510069 1800.1017389375704 2144.133751609844 1659.5347815707194 1236.1505460094488 1792.0990967223288 1735.6760156773767 1841.7998080215973 1902.4812554385703 1767.6062773071747 1.1745508799880682 0.8432595044756345 1.0183838799666973 1.2130154656818048 0.9388599728775038 0.6993359108752648 1.013856490401509 0.9819358744989062 1.0419740140476597 1.0763037447099748 1.0 10.787581244327354 -5.209671121891753 21.439067985110825 0.996044719700188 1.1745565496197192 0.1560704415760733 0.12479359752317984 10752.657301631752 4452291.802026853 0.01646461206410484 15.300530820176782 6.17062107493568e-06 5.209671121891753 0.17851182991953118 S(ph)PAKPK ddPTM_A549_MK2206_60min_R1 1 SPAKPK 6 1 P16401 P16401 HIST1H1B Histone H1.5 1 S(1)PAKPK 62.842 0.016925 78930000.0 13939.0 10328.0 9284.9 6683.4 4287.9 3267.9 3833.0 3974.4 3082.4 9714.6 9768.9 True False 16291.562424169226 10853.651085545289 10601.638435994948 8320.833300029226 3657.155590146781 3613.707008943543 4529.406484844362 4537.7833710895275 2384.2413215813385 7520.065112917286 7343.012522075886 2.218648323857626 1.478092411379538 1.4437723487631804 1.1331634359894713 0.4980456698326445 0.4921286730860619 0.61683218859116 0.6179729855351909 0.3246952547627289 1.0241117103244903 1.0 12.84215634487202 -5.84975862599976 0.9579030991719715 0.6393072482660981 2.2595435680312095 0.8021226525101643 0.2393814089665243 0.35638279936128736 0.4223525000871153 0.04334005605703085 0.4805061248293099 1.413322828840407e-06 5.84975862599976 1.6202363197651115 up S(ph)PAKPK ddPTM_A549_PD325901_60min_R1 2 SPAKPK 6 1 P16401 P16401 HIST1H1B Histone H1.5 1 S(1)PAKPK;S(1)PAKPK 50.607 0.026802 161421000.0 14962.4 16288.5 15439.0 17101.7 16381.8 12475.900000000001 9467.900000000001 11722.400000000001 11838.8 16229.4 15835.9 True False 16481.371833263293 17661.189059495722 16486.783382249017 18158.033168221285 15231.198882141967 12374.300406771457 9828.206115533674 11488.587535955108 11341.25640653599 15204.672914273277 13888.184692041024 1.1867189412240722 1.271670088720588 1.1871085925072113 1.3074446783982652 1.0967019246849872 0.8909948046603141 0.7076667205589494 0.8272202444527494 0.8166118652666956 1.0947919581589882 1.0 13.761570418253807 -7.0920353459285055 3.197069697861591 0.8857004326706339 1.2357442407816546 0.729238828703074 0.09969056374116254 0.09977599642287768 1.9569082272844411 0.01469971748078653 0.02707880963902368 8.090300519634929e-08 7.0920353459285055 0.35004380811102065 S(ph)PAKSPNPSTPR ddPTM_A549_MK2206_60min_R1 3 SPAKSPNPSTPR 12 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 S(0.996)PAKS(0.003)PNPSTPR;S(1)PAKSPNPSTPR;S(0.979)PAKS(0.021)PNPSTPR 85.619 0.00010618 141128100.0 5116.31 5636.27 5001.920000000001 5294.89 8261.11 5063.01 4653.15 5469.330000000001 9605.33 8726.289999999999 8924.69 True False 5979.818046230097 5923.13206854438 5711.267469307355 6592.138287696644 7045.911662426249 5598.774357645966 5498.567123650807 6244.624276620649 7429.738091560109 6755.0150283283865 6708.443164086585 0.8913868538445466 0.8829369085593002 0.8513551251179148 0.9826629109697798 1.0503050394980298 0.8345862401605797 0.8196487603990137 0.9308604282512261 1.1075204648576216 1.006942276039711 1.0 12.711762282078299 -8.646580443185387 6.156609999908162 1.0505136249354476 0.9035032001128427 0.4316104912255473 0.06791293942980739 0.14361678825503713 7.28600341358971 0.012754803409150061 0.014453292290345697 2.256418006618156e-09 8.646580443185387 -0.14701042482260496 S(ph)PAKSPNPSTPR ddPTM_A549_PD325901_60min_R1 5 SPAKSPNPSTPR 12 1 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 S(0.999)PAKS(0.001)PNPSTPR;S(0.999)PAKS(0.001)PNPSTPR;S(0.991)PAKS(0.009)PNPSTPR;S(0.992)PAKS(0.003)PNPS(0.002)T(0.002)PR;S(0.987)PAKS(0.013)PNPSTPR 91.65700000000001 7.506e-05 184399500.0 11072.64 11112.03 10746.68 11653.749999999998 11190.61 14232.36 11750.899999999998 12951.39 12021.71 13480.74 13438.78 True False 12196.72626155326 12048.479765772672 11476.014329836633 12373.57566991345 10404.620159108688 14116.456378883924 12198.086929839215 12693.064366281104 11516.479335322649 12629.563775762515 11785.895255445363 1.0348578531544377 1.0222795557432083 0.9737074767005454 1.0498630270955926 0.8828027004822996 1.1977415438476586 1.034973302024164 1.07697074266943 0.9771408183864321 1.071582896507362 1.0 13.524773729273376 -8.794536668438269 24.971483192063943 0.989205379947886 1.032698578966218 0.0 0.07544358610370046 373.23617532822544 281600.35854956164 0.011730351815919504 0.012488245978150821 1.60495674234842e-09 8.794536668438269 0.04349319901833193 S(ph)PALSDANK ddPTM_A549_MK2206_60min_R1 2 SPALSDANK 9 0 P52701;P52701-2;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 S(1)PALSDANK;S(1)PALSDANK 138.25 4.3031e-05 56323000.0 12514.6 10758.099999999999 11036.7 10490.6 17359.1 14232.400000000001 11842.6 12844.900000000001 18787.9 15721.099999999999 15701.3 True False 14626.758527405713 11305.64133843965 12601.870017614137 13060.797470940935 14805.599385460722 15738.463121297485 13994.247126902646 14665.703910856448 14532.470648111228 12169.692591221858 11802.233876165179 1.2393211896050214 0.9579238521337552 1.0677529482841241 1.1066377440051791 1.2544743258613857 1.3335156112336997 1.1857286742270272 1.2426210211334734 1.2313322037669336 1.0311346749193615 1.0 13.526772332106663 -4.903397817946425 19.95826898416955 1.1363320726021053 9.965451205658734 0.056476501382003885 0.11388534854999989 1278.5485349516896 264352.13261904905 0.017452798032683764 388.05584765957695 1.2491143052217068e-05 4.903397817946425 8.82911913305663 S(ph)PALSDANK ddPTM_A549_PD325901_60min_R1 2 SPALSDANK 9 0 P52701;P52701-2;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 S(1)PALSDANK;S(1)PALSDANK 122.77 0.00010911 87172000.0 27448.0 28446.0 27060.0 26841.0 32217.0 28083.0 28187.0 28473.0 31537.0 32140.0 33125.0 True False 30234.500753850378 30843.24425124568 28896.454324998922 28498.907609666152 29954.189062616304 27854.301358888966 29259.671709518247 27905.083678363597 30211.609562871698 30110.67491495328 29050.834996675858 1.0407446380563574 1.061699061482223 0.9946858439113849 0.9810013245033108 1.031095631710545 0.9588124183720087 1.0071886647274093 0.9605604686253127 1.0399566679005496 1.036482253208856 1.0 14.826292010588924 -5.759469472559137 24.999745437758428 1.0076318591947246 1.0512218587497995 0.31299472390141003 0.02727238571502135 50.603964543989825 642148.1062075152 0.00386432522366132 0.013602673179468288 1.739924996600439e-06 5.759469472559137 0.04358999955507481 S(ph)PAMSR ddPTM_A549_MK2206_60min_R1 1 SPAMSR 6 0 Q9BQI6 Q9BQI6 ANKRD32 Ankyrin repeat domain-containing protein 32 1 S(0.997)PAMS(0.003)R 42.869 0.049482 111610000.0 2176.9 2509.7 1761.6 1200.5 1847.5 1649.6 1626.6 1818.6 2145.2 3140.6 3326.5 True False 2544.307499904873 2637.4330102045906 2011.4213689806772 1494.6225538924932 1575.7351973684504 1824.1595770841413 1922.1321649485637 2076.392119228919 1659.3156251804721 2431.136278758572 2500.438243270524 1.0175446271278308 1.0547883025316716 0.8044275336109793 0.5977442386009728 0.6301836094569646 0.7295359451462303 0.7687181117636614 0.8304112788296819 0.6636099210393295 0.9722840727226656 1.0 11.287965257942881 -5.767950440770864 16.518822062601604 0.7930758733577625 1.036169144384279 0.39671748964686726 0.12181577211879972 2.0437273407557117 5194.676118065217 0.020763909859645293 0.06800791004080736 1.7062770885815281e-06 5.767950440770864 0.24309327102651657 S(ph)PAPAQTR ddPTM_A549_MK2206_60min_R1 1 SPAPAQTR 8 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(1)PAPAQTR 68.657 0.0074351 14777000.0 1059.6 1119.7 1044.7 732.94 1065.9 954.5 699.66 881.85 1266.3 1480.4 1254.2 True False 1238.434575267216 1176.6879473746178 1192.8541690361692 912.5103329029264 909.1075219891925 1055.5045564541786 826.7791654542672 1006.8549380523605 979.4850718655754 1145.9766118175473 942.747525840942 1.313643941056772 1.2481474786422782 1.2652954649465975 0.9679265210364316 0.9643170595205305 1.1196046953426433 0.8769889528129712 1.0680006157048612 1.0389685944726963 1.215571062671655 1.0 9.880727648918713 -6.254187371102064 24.558169723837725 1.0128724915814558 1.272940847061272 0.6097786045569136 0.08609524670532208 135.49506901689935 458837.7716778506 0.007725593403951769 0.01997414609842643 5.569454097283453e-07 6.254187371102064 0.2600683554798162 S(ph)PAPAQTR ddPTM_A549_PD325901_60min_R1 2 SPAPAQTR 8 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(0.999)PAPAQT(0.001)R;S(0.999)PAPAQT(0.001)R 76.85 0.0045763999999999996 42535000.0 3251.2 3335.8 2619.8 2860.1 3783.7 2608.2200000000003 2451.05 2392.4 2739.8 3238.2 3189.4 True False 3581.2594305930606 3616.919572991119 2797.5953821371813 3036.761881241616 3517.945965056376 2586.9795210725847 2544.326049016026 2344.681705198508 2624.6557339111487 3033.739499365329 2797.124019272392 1.2803363046893586 1.2930851646442112 1.0001685169701242 1.0856729484706795 1.257701103282324 0.9248712260336345 0.9096221803128609 0.8382473172599703 0.9383408514699655 1.0845924165187666 1.0 11.449728506306961 -7.2706706555519895 24.86530053234205 0.9511713919562772 1.1738788196830854 0.584220046056607 0.09818581184113226 344.100345909319 926865.362257346 0.014282502142331786 0.023023187192893365 5.362031295915549e-08 7.2706706555519895 0.22270742772680818 S(ph)PAPGAPTR ddPTM_A549_MK2206_60min_R1 2 SPAPGAPTR 9 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.998)PAPGAPT(0.002)R;S(1)PAPGAPTR 45.68 0.044518 6777600.0 922.1800000000001 877.0799999999999 904.8199999999999 874.72 1226.69 703.16 997.04 831.41 1358.13 1165.0900000000001 1440.85 True False 1077.8214388636477 921.7196256884256 1033.1370816763729 1089.0264392676725 1046.2455259864175 777.5679244801677 1178.1892621051977 949.2649135863385 1050.5157234879528 901.8953598098532 1083.0471795630042 0.9951749648602889 0.851042912147491 0.9539169679507689 1.0055207749186705 0.9660202673798239 0.7179446465055257 1.0878466647968024 0.8764760497039057 0.9699630295993408 0.8327387549024009 1.0 10.08088037547446 -9.209721772582215 1.0593957830721379 0.9930857830678206 0.9300800513920295 0.0 0.1033022429821905 0.8396211109940062 1.9697453144497614 0.02117526421192086 0.01805386125277694 6.16990145263788e-10 9.209721772582215 -0.06300573167579104 S(ph)PAPGAPTR ddPTM_A549_PD325901_60min_R1 2 SPAPGAPTR 9 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(1)PAPGAPTR;S(1)PAPGAPTR 70.1 0.0037093000000000004 8387500.0 1179.3600000000001 1287.5700000000002 1047.0900000000001 1215.5 1597.72 1257.76 1344.15 1297.8600000000001 1153.8000000000002 1371.77 1381.5300000000002 True False 1299.0877590010562 1396.0780426273077 1118.1518240636772 1290.5786743992098 1485.5016590347748 1247.5172195689984 1395.3023637971023 1271.9731641485268 1105.309798447582 1285.1562080922674 1211.6105682402285 1.0721990985006689 1.1522498063507354 0.9228640401244659 1.0651761450658823 1.2260553827888379 1.0296354722135854 1.1516096016095931 1.0498201299085483 0.9122649037742875 1.0607007249522908 1.0 10.242710351831148 -8.600453176259807 5.693528442363846 0.9589069914734395 1.0876907220524261 0.18790776550803745 0.08146004263554936 0.16175578673816035 8.981658646653015 0.012985583612079405 0.014747914594267988 2.5092667030927987e-09 8.600453176259807 0.12878373057898662 S(ph)PAPPADKEAEKPVFFPAFAAEAQK ddPTM_A549_MK2206_60min_R1 2 SPAPPADKEAEKPVFFPAFAAEAQK 25 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8 C9J0Q5 NCOR2 1 S(1)PAPPADKEAEKPVFFPAFAAEAQK;S(1)PAPPADKEAEKPVFFPAFAAEAQK 120.0 1.1093e-17 4422100.0 3117.6 3573.0 2683.4 2902.1 4395.9 3410.5 2995.4 3113.4 4478.8 3108.0 3861.7 True False 3643.7746619979916 3754.850438483084 3063.9464699833957 3613.1146302802185 3749.268933213515 3771.3968462933217 3539.6254069143747 3554.7339843876175 3464.3589511739224 2405.9006414002556 2902.733312501964 1.255290882667171 1.29355680809914 1.055538397822181 1.2447284132919372 1.291633963432174 1.2992570933230607 1.21941116383973 1.2246161123646844 1.193481652707487 0.8288397115360654 1.0 11.503196315667426 -10.257683527818275 0.5840030849711674 0.9880313647194121 1.2382378330229813 0.6546150146010831 0.08384129658055853 0.4441317220204662 0.26898723927471874 0.05479378457148888 0.01511431677124676 5.5247988700458066e-11 10.257683527818275 0.2502064683035692 S(ph)PAPPADKEAEKPVFFPAFAAEAQK ddPTM_A549_PD325901_60min_R1 2 SPAPPADKEAEKPVFFPAFAAEAQK 25 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8 C9J0Q5 NCOR2 1 S(1)PAPPADKEAEKPVFFPAFAAEAQK;S(1)PAPPADKEAEKPVFFPAFAAEAQK 165.49 1.0075e-41 7272700.0 4931.1 4782.0 5679.5 5612.1 5812.0 6160.8 5505.3 6140.700000000001 5687.2 6273.7 6223.8 True False 5431.701641916045 5184.99592243046 6064.945023607959 5958.746670996138 5403.785170311513 6110.62848740673 5714.807204115753 6018.218921214044 5448.18676177074 5877.577511323656 5458.312055918829 0.9951247906440365 0.9499266200451121 1.1111392975473646 1.0916830349658468 0.9900103026267637 1.1195088197239562 1.04699166071291 1.1025787568682646 0.9981449770470507 1.0768122912559 1.0 12.414239161622463 -8.837296234059592 24.99927038924329 0.9991237797462102 1.0510054293142201 0.0 0.05699808531652542 47.06427743040876 15508.7906645378 0.008916574683308275 0.009492347372457305 1.4544666444434339e-09 8.837296234059592 0.05188164956800989 S(ph)PAQSDSTTQR ddPTM_A549_MK2206_60min_R1 2 SPAQSDSTTQR 11 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.997)PAQS(0.002)DSTTQR;S(0.992)PAQS(0.004)DS(0.001)T(0.001)T(0.001)QR 49.448 0.028367000000000003 9041600.0 726.0899999999999 643.73 654.97 486.11 956.66 698.62 411.7 722.41 892.47 998.89 1166.21 True False 848.6362408038619 676.4931074068616 747.854594710079 605.2069718223074 815.9365812798391 772.5475046935758 486.50056086888185 824.8138297878384 690.3269699817347 773.2400552407655 876.6078712414002 0.9680910571816718 0.7717168982852641 0.8531232940573664 0.6903964608089238 0.9307885635619013 0.8812920007203903 0.5549808264668312 0.9409153817199768 0.7874980280568716 0.8820820353184243 1.0 9.77578782294935 -10.769771293084972 0.8299555933267356 1.0101336511670722 0.8143299482792852 0.10377935046617837 0.11943387265928856 0.74309846921101 0.8297171395690918 0.09568743708519586 0.019733438096650006 1.6991382121900593e-11 10.769771293084972 -0.19580370288778703 S(ph)PAQSDSTTQR ddPTM_A549_PD325901_60min_R1 2 SPAQSDSTTQR 11 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(1)PAQSDSTTQR;S(0.998)PAQS(0.002)DSTTQR 66.498 0.0051186999999999995 11737700.0 695.5 677.8299999999999 741.28 625.64 922.23 743.48 684.98 860.73 712.51 745.9100000000001 877.8199999999999 True False 766.1066479999611 734.9531129445921 791.587718478758 664.2843618684676 857.4557463207826 737.4253453800081 711.0472887354383 843.5620649203773 682.5656825202685 698.8131153022034 769.8537049594562 0.9951327675175734 0.9546659426459445 1.028231355359193 0.8628709033795605 1.1137905043477578 0.9578772442471315 0.9236135179383012 1.0957433334230728 0.8866173899315265 0.9077219617186956 1.0 9.588440506774502 S(ph)PARTPPSEEDSAEAER ddPTM_A549_PD325901_60min_R1 1 SPARTPPSEEDSAEAER 17 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.5)PART(0.5)PPS(0.001)EEDSAEAER 53.342 0.0040353 56924000.0 666.86 723.69 859.42 934.66 1141.0 1164.6 999.91 1110.8 674.04 907.49 908.13 True False 734.559136283615 784.6778960902758 917.74540931229 992.3918254331271 1060.8600962363096 1155.1158837218998 1037.9621222217472 1088.644222594257 645.7124428372401 850.190926526788 796.4357671103764 0.9223080713071665 0.9852368872598973 1.1523156633736433 1.2460412583348903 1.33200961087586 1.4503566155910907 1.3032590512448672 1.3668951942528516 0.8107526928128934 1.0674946576187125 1.0 9.637414202237052 -8.766134344283854 24.999105623441228 0.9106332084372142 1.22481620835174 0.32965715407428176 0.16121219586087404 85.60091573559868 455794.6932460375 0.030286451804787763 0.03275609565740298 1.7134271954162246e-09 8.766134344283854 0.3141829999145258 S(ph)PASAEAPGDSGER ddPTM_A549_MK2206_60min_R1 2 SPASAEAPGDSGER 14 0 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(1)PASAEAPGDSGER;S(1)PASAEAPGDSGER 118.24 3.0198000000000003e-06 17144700.0 1266.31 1446.54 1601.12 1238.4099999999999 1550.27 1415.97 1329.25 1358.08 2702.3 2285.5 2370.8 True False 1480.0321696929293 1520.1627073281059 1828.182891861003 1541.8205055943363 1322.2273366302513 1565.8070055551843 1570.757518909307 1550.5919989455688 2090.2333646863667 1769.2039626513138 1782.0649292486871 0.8305152889782227 0.8530344110239584 1.0258789463029045 0.8651876148218477 0.7419636147531943 0.8786475620814352 0.881425526718341 0.8701097100874396 1.1729277257970632 0.9927831099830938 1.0 10.799334186840994 -8.745221628994374 24.823941246884917 1.0816603091610273 0.8695474791081341 0.530222496215637 0.077256308356189 118.376557331605 181194.6851698759 0.014725000597664477 0.016671312499455936 1.7979531502060721e-09 8.745221628994374 -0.21211283005289316 S(ph)PASAEAPGDSGER ddPTM_A549_PD325901_60min_R1 3 SPASAEAPGDSGER 14 0 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.992)PAS(0.007)AEAPGDSGER;S(1)PASAEAPGDSGER;S(1)PASAEAPGDSGER 169.3 1.6911000000000002e-22 19272210.0 2857.0 3196.19 2928.3199999999997 3086.18 3769.66 3057.5 2825.08 3130.95 2472.7 2824.3500000000004 3207.01 True False 3147.0405367877606 3465.54414832978 3127.0534046186567 3276.8063293766795 3504.8920862210066 3032.600733710894 2932.5899653430947 3068.5007460672414 2368.7810180458778 2646.0200589934134 2812.5681009113778 1.118920653252094 1.2321636397734914 1.1118142894408045 1.1650584845625147 1.246153678940357 1.0782319307142172 1.0426734074075665 1.0909960704855224 0.8422128578071776 0.9407843522565741 1.0 11.457672313492264 -8.105263488813415 1.2902432634268517 0.9291961058163555 1.169343789676185 0.6669844122506694 0.06610716327866652 0.1902399190373631 0.6253585426643962 0.014043717327535449 0.019554022971590177 7.847593723893773e-09 8.105263488813415 0.24014768385982943 S(ph)PASPLNNQGIPTPAQLTK ddPTM_A549_MK2206_60min_R1 1 SPASPLNNQGIPTPAQLTK 19 0 J3QLL6;J3KSG1;J3QRK1;Q719H9;A0A2U3U043 J3QLL6;A0A2U3U043 KCTD1 BTB/POZ domain-containing protein KCTD1 1 S(1)PASPLNNQGIPTPAQLTK 163.45 6.7412e-27 3104400.0 1380.8 1556.1 1334.3 1185.6 2143.9 1429.5 1445.6 1596.3 2503.4 1834.3 1857.3 True False 1613.8452826811726 1635.2988433595106 1523.5238037187316 1476.072053223607 1828.5351500071579 1580.768741174698 1708.2468078505121 1822.5804134637215 1936.383897108334 1419.9303560233222 1396.0811511277159 1.1559824308046511 1.1713494176456443 1.0912859918551805 1.0572967424073283 1.309762794612704 1.1322900104322708 1.2236013690684366 1.3054974719710895 1.3870138534168852 1.0170829646087132 1.0 10.447167089337702 -6.740841630693667 24.998689859462953 1.2027133524870224 1.1207414009483272 0.09336330584895358 0.115062798523205 595.7172817951748 722995.1662108524 0.021091438438409323 0.04386708553665315 1.8161778272679951e-07 6.740841630693667 -0.08197195153869519 S(ph)PASPLNNQGIPTPAQLTK ddPTM_A549_PD325901_60min_R1 1 SPASPLNNQGIPTPAQLTK 19 0 J3QLL6;J3KSG1;J3QRK1;Q719H9;A0A2U3U043 J3QLL6;A0A2U3U043 KCTD1 BTB/POZ domain-containing protein KCTD1 1 S(0.825)PAS(0.175)PLNNQGIPTPAQLTK 179.1 7.7643e-35 2225900.0 1482.4 1624.2 1607.1 1938.7 1677.9 1761.8 1969.5 1711.8 2105.5 1435.7 1505.2 True False 1632.8921567147993 1761.0770341303962 1716.1674702773735 2058.4490958928427 1560.0500924407581 1747.452484922928 2044.4504002517522 1677.656806118879 2017.0131570734804 1345.0496569819056 1320.06994224895 1.2369739696768693 1.3340785800562358 1.3000579858318781 1.5593485087509424 1.1817935114733116 1.3237574987472738 1.5487439981920235 1.2708847860445356 1.527959309214462 1.0189230236470643 1.0 10.366398655656793 -10.943372980853573 1.1790235440967174 0.998110477217634 1.3785080481056173 0.5512794201427504 0.12295827632119728 0.2837710451228393 0.6953157930835013 0.08818449968128986 0.020201110002189004 1.1392709384515268e-11 10.943372980853573 0.3803975708879833 S(ph)PASPRVPPVPDYVAHPER ddPTM_A549_MK2206_60min_R1 2 SPASPRVPPVPDYVAHPER 19 1 Q9Y5U2-2;Q9Y5U2;A6NCC9;E9PME3;C9JHT9;C9JJV1 Q9Y5U2-2 TSSC4 Protein TSSC4 1 S(0.5)PAS(0.5)PRVPPVPDYVAHPER;S(0.5)PAS(0.5)PRVPPVPDYVAHPER 74.062 0.00021383 3608700.0 794.4300000000001 910.02 901.64 873.5899999999999 1290.17 1113.82 680.24 1038.82 1131.78 1609.65 1736.98 True False 928.5103620512783 956.3361309903105 1029.5061098590706 1087.6195892169446 1100.3877020778643 1231.6836931061214 803.8308028308188 1186.0759162528245 875.433637081277 1246.0289470495236 1305.6399277907817 0.7111534675738445 0.7324654452077661 0.7885069136948458 0.8330164895135062 0.8427956886549755 0.9433563319331092 0.6156604020152379 0.9084249730779401 0.6705015819809994 0.9543434759672804 1.0 10.35054136683364 -10.997056213204601 1.2557668429705444 1.0007993754230264 0.7760442486777583 0.3840219170558693 0.09428321271626408 0.3484023820618033 0.9720559126527955 0.0672386848698418 0.015115888345995051 1.0068013443940402e-11 10.997056213204601 -0.2247551267452681 S(ph)PATAPK ddPTM_A549_PD325901_60min_R1 1 SPATAPK 7 0 Q07960;H0YE29 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.999)PAT(0.001)APK 58.676 0.032164 4159700.0 2757.4 2848.1 2662.9 3246.8 3214.8 2762.7 2364.3 2724.6 3001.0 3354.5 3705.5 True False 3037.329218109408 3088.11938240782 2843.6204073185363 3447.3474619821923 2989.0035384579237 2740.2014871702663 2454.274730294604 2670.255715592648 2874.878406258617 3142.69629751745 3249.7469910998457 0.9346355966873141 0.9502645562455543 0.8750282453084571 1.0608048784793154 0.9197649991350016 0.8432045616704676 0.7552202485350954 0.8216811102235764 0.8846468399331118 0.9670587606125715 1.0 11.666111686220322 -4.281093717791821 16.264676758797968 0.9210507283174831 0.9079694330417217 0.0 0.08301040746969253 0.0 0.0 0.012020234549688726 0.0 5.234874593673427e-05 4.281093717791821 -0.013081295275761406 S(ph)PAVKPAAAPK ddPTM_A549_MK2206_60min_R1 3 SPAVKPAAAPK 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 S(1)PAVKPAAAPK;S(1)PAVKPAAAPK;S(1)PAVKPAAAPK 90.70700000000001 8.316799999999999e-05 214979600.0 16485.3 19011.4 18899.4 16319.300000000001 23737.5 19316.6 17069.300000000003 19207.8 25370.6 21851.7 24206.0 True False 19267.615613111207 19978.999055745142 21579.61910814796 20317.529232601213 20245.74519487612 21360.669790678658 20170.57086140201 21930.564471420446 19624.199608523086 16915.38579333525 18194.982148386083 1.058952158126754 1.0980499399675039 1.1860203506746556 1.1166556288379432 1.1127103632070308 1.1739868506863786 1.1085787662172104 1.2053083807705585 1.07855008861681 0.929673118411697 1.0 14.15125301526063 -9.550079789773608 1.0589251140946045 1.015514485195669 1.13166479758662 0.5799373276227558 0.05003028622539891 0.22904001883239392 0.5348733931575942 0.01196954711717318 0.008564246761052533 2.8178651777836976e-10 9.550079789773608 0.11615031239095108 S(ph)PAVKPAAAPK ddPTM_A549_PD325901_60min_R1 2 SPAVKPAAAPK 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 S(1)PAVKPAAAPK;S(1)PAVKPAAAPK 109.1 3.0135e-05 305620000.0 21493.6 20902.0 23139.0 20307.1 25816.0 20402.5 22766.3 22857.0 20500.4 24892.0 24300.0 True False 23675.61444924796 22663.484895575377 24709.35168611049 21561.423446229706 24002.77322036511 20236.348804427307 23632.684004697367 22401.099204030394 19638.839480061364 23320.314871904713 21311.25405039164 1.1109442172321564 1.0634514910284638 1.1594508529476426 1.0117388397344675 1.126295672868862 0.949561614561834 1.1089297677563497 1.0511394191567403 0.9215243473530108 1.0942722946647128 1.0 14.37932786985678 -8.638311791532779 5.878939804193322 0.963146830295348 1.0735247096283473 0.0871733487898615 0.06906712914649765 0.1421217307297431 6.857929877750133 0.009539266126146773 0.010811875191764896 2.2997901442188335e-09 8.638311791532779 0.11037787933299936 S(ph)PCGLTEQYLHK ddPTM_A549_MK2206_60min_R1 2 SPCGLTEQYLHK 12 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 S(0.995)PCGLT(0.005)EQYLHK;S(0.997)PCGLT(0.003)EQYLHK 69.45100000000001 0.0011126 3593000.0 1870.92 1972.57 2003.35 1536.27 2146.2 1887.78 1742.26 1855.18 2530.9 2567.8 2708.3999999999996 True False 2186.6855563976396 2072.9653874723153 2287.455154148184 1912.6562189657802 1830.4968230539487 2087.543626593054 2058.806089821273 2118.157446250472 1957.6551910168087 1987.732196585448 2035.829531962691 1.0741005187647084 1.018241141965272 1.1235985716067827 0.9394972363534965 0.8991405195351566 1.025401976844548 1.0112860912457788 1.0404394930888003 0.9616007432260223 0.9763745762490863 1.0 10.991401048586376 -6.26719437021269 24.998767637503008 0.9827210253663289 1.066606184215502 0.4541495996679291 0.043953933776528904 337.009656862777 1463916.071978021 0.006217724527325501 0.014817556717698835 5.405123603597574e-07 6.26719437021269 0.08388515884917302 S(ph)PCGLTEQYLHK ddPTM_A549_PD325901_60min_R1 2 SPCGLTEQYLHK 12 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 S(0.988)PCGLT(0.011)EQY(0.001)LHK;S(0.999)PCGLT(0.001)EQYLHK 116.96 7.0453999999999995e-06 5190100.0 1827.63 1618.95 1503.3400000000001 1719.69 2163.16 1635.5 1779.15 2034.0700000000002 2286.0 2089.61 2653.6 True False 2013.1696521699057 1755.3845982055198 1605.3656927178083 1825.9113456006396 2011.2271040968778 1622.1810302482968 1846.856526838236 1993.4988781529553 2189.927369779138 1957.6716679849271 2327.2240225563473 0.8650519385574804 0.7542826050228337 0.6898200075102305 0.7845877010133991 0.8642172324637825 0.697045499069061 0.7935877719281834 0.8565994759555591 0.9410041098551418 0.8412046494065131 1.0 11.184394378376934 -8.658455714565198 1.460780566268248 0.9788679219707709 0.7726746797636737 0.44810052126966626 0.06747274598223066 0.13675593146105508 0.5694547396567666 0.010393042474966238 0.011572671652734538 2.1955548206065764e-09 8.658455714565198 -0.20619324220709723 S(ph)PCLEPHILK ddPTM_A549_MK2206_60min_R1 2 SPCLEPHILK 10 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 S(1)PCLEPHILK;S(1)PCLEPHILK 72.79 0.00060369 3050600.0 814.42 934.12 730.36 863.09 1435.92 1010.34 833.4000000000001 1136.19 1648.25 1295.74 1662.26 True False 951.8741853427003 981.6627180508877 833.9360303410131 1074.5470887455829 1224.698070151722 1117.2535081905871 984.8179922956671 1297.2484119359424 1274.924006714392 1003.0314340694873 1249.4749659578727 0.7618193331412402 0.7856601731098513 0.6674291626977104 0.85999889395288 0.9801701542798369 0.8941783858263044 0.788185453192082 1.038234816446639 1.0203677876307105 0.8027623292960842 1.0 10.287106281044498 -6.941162606712802 0.5040287399214897 1.0142663733847035 0.7089179720901831 0.3128747297052774 0.0973213597385068 0.5927933193468072 0.24611467081808375 0.01784187846924782 0.08072646646039792 1.1450841235923634e-07 6.941162606712802 -0.30534840129452034 S(ph)PCPQEK ddPTM_A549_MK2206_60min_R1 2 SPCPQEK 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PCPQEK;S(1)PCPQEK 78.556 0.01672 28778000.0 8665.0 9126.599999999999 6842.3 5320.8 5393.1 3837.3 3408.6 3983.2 5637.0 11748.400000000001 13660.4 True False 10127.44016108949 9591.104957139583 7812.641026894016 6624.39623885979 4599.782134196368 4243.360539006411 4027.898498366944 4547.830798038396 4360.228500439274 9094.428280381833 10268.145672139688 0.986296891810566 0.9340639744879056 0.7608619196055882 0.6451404616155383 0.44796619380623376 0.413254805151413 0.3922712656186544 0.44290672758742755 0.4246364085260085 0.8856933443257945 1.0 13.325888047948107 -5.883964748998946 2.2618957336867926 0.6318375830491034 0.979780806166804 0.3446731940548091 0.19496988140477894 0.4040018914285599 4.009423214363434 0.037405534509949316 0.16948698136963386 1.30627691227439e-06 5.883964748998946 0.34794322311770054 S(ph)PCPQEK ddPTM_A549_PD325901_60min_R1 2 SPCPQEK 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PCPQEK;S(1)PCPQEK 80.098 0.016022 49869000.0 9719.3 9507.2 8861.900000000001 7702.799999999999 9502.900000000001 8396.3 6911.5 7793.0 7944.4 10325.7 13493.5 True False 10705.996181029506 10308.405109521296 9463.321824933775 8178.584461671933 8835.449087225274 8327.923316584396 7174.5209146179195 7637.562501509765 7610.524495395187 9673.73353980501 11833.885042344007 0.9046898920110606 0.8710922129660514 0.7996800535979619 0.6911157605813579 0.746622859323905 0.7037353571363437 0.6062692758080757 0.645397726459319 0.6431129310588373 0.8174604962943663 1.0 13.530636165076551 -10.860277706561991 1.1244120332751324 0.998983307806901 0.7264641674797641 0.2386415451858228 0.10318784394576558 0.3280367333795846 0.7406400436579785 0.06896760737533035 0.017021652124532726 1.3795018697122417e-11 10.860277706561991 -0.272519140327137 S(ph)PDAPGRLEEEAEEAEGAEEPEGPRPR ddPTM_A549_MK2206_60min_R1 1 SPDAPGRLEEEAEEAEGAEEPEGPRPR 27 2 E7EUN2 E7EUN2 AGAP1 1 S(1)PDAPGRLEEEAEEAEGAEEPEGPRPR 79.021 1.004e-06 3928900.0 302.67 279.42 221.59 100.29 390.93 217.59 340.39 322.14 396.55 442.29 373.21 True False 353.7532964289621 293.64128450068404 253.01479402385814 124.86105450218916 333.4247148618394 240.61522937544757 402.234456920473 367.8043315123746 306.7320581602258 342.3763818162546 280.53165692800025 1.261010255679467 1.0467313661361521 0.9019117371441454 0.4450872171415411 1.188545772384663 0.8577115039719121 1.4338291133528234 1.3110974195927316 1.0933955244806828 1.2204554222703183 1.0 8.132019772430622 S(ph)PDAPGRLEEEAEEAEGAEEPEGPRPR ddPTM_A549_PD325901_60min_R1 3 SPDAPGRLEEEAEEAEGAEEPEGPRPR 27 2 E7EUN2 E7EUN2 AGAP1 1 S(1)PDAPGRLEEEAEEAEGAEEPEGPRPR;S(1)PDAPGRLEEEAEEAEGAEEPEGPRPR;S(1)PDAPGRLEEEAEEAEGAEEPEGPRPR 163.92 5.294e-42 10006900.0 1125.92 1253.32 1454.21 1596.55 1458.5 1094.4099999999999 1121.74 838.82 1161.44 1255.8 1235.77 True False 1240.222569541504 1358.9416749269221 1552.9014354751182 1695.1652674718716 1356.0599915518474 1085.4974878104788 1164.428429539681 822.08907705844 1112.6287158163977 1176.5085736838312 1083.7781241914602 1.1443509901685434 1.2538928813872714 1.4328591810557552 1.5641257464359042 1.251233957654866 1.0015864535190737 1.0744158823176 0.7585400172860565 1.026620385649933 1.085562208188647 1.0 10.081853716729807 -7.176271407149783 3.734076341514283 0.9955787744365427 1.3532845598316152 0.640816784757244 0.12715339526203248 0.11565788001672975 3.0563424818449603 0.018680784018579907 0.033138462250971584 6.663901864694903e-08 7.176271407149783 0.3577057853950725 S(ph)PDASSAFSPASPATPNGTK ddPTM_A549_MK2206_60min_R1 1 SPDASSAFSPASPATPNGTK 20 0 Q53GS7-2;Q53GS7 Q53GS7-2 GLE1 Nucleoporin GLE1 1 S(0.916)PDAS(0.024)S(0.019)AFS(0.03)PAS(0.011)PATPNGTK 104.2 1.3842000000000002e-09 1717200.0 839.22 689.6 569.77 462.05 1088.5 533.66 403.9 753.26 1196.6 929.6 965.08 True False 980.8598190409141 724.6976944802507 650.5719535672806 575.2522707422124 928.3830919272311 590.1315469851617 477.2834018337172 860.0369117620015 925.5720105775468 719.6027143647613 725.4240011470073 1.3521193364019157 0.9989987832417894 0.8968161413719783 0.792987645615047 1.279779950014494 0.813498789745132 0.6579371527259348 1.1855644566517656 1.2759048626928178 0.9919753319809633 1.0 9.502680668420302 S(ph)PDEEDYDYESYEK ddPTM_A549_MK2206_60min_R1 2 SPDEEDYDYESYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)PDEEDYDYESYEK;S(1)PDEEDYDYESYEK 182.57 5.5983e-26 8833400.0 3062.1 2874.2 2469.9 1882.01 5364.1 3296.1000000000004 2837.1000000000004 3321.3 5243.6 3353.1000000000004 3570.0 True False 3578.9076188427175 3020.484503299214 2820.1689596079573 2343.1025344866407 4575.0479957803045 3644.891114225896 3352.5643459827684 3792.1044460546623 4055.932972308563 2595.6323811709126 2683.4704730124085 1.3336862301395513 1.1255888721996932 1.0509409318903717 0.8731612879855251 1.7048996967887073 1.358275095955953 1.2493390106950752 1.413134403449472 1.5114505686196191 0.9672669803059578 1.0 11.389884298477208 S(ph)PDEEDYDYESYEK ddPTM_A549_PD325901_60min_R1 2 SPDEEDYDYESYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)PDEEDYDYESYEK;S(1)PDEEDYDYESYEK 193.16 5.5788999999999994e-27 15120100.0 6779.5 7429.1 7696.5 8010.1 8540.5 7775.8 6097.200000000001 6570.7 7240.9 8013.0 8681.3 True False 7467.749849195885 8055.176329428719 8218.830772814272 8504.865684742996 7940.64474312551 7712.476462858271 6329.232282515865 6439.6422338855655 6936.590153908035 7507.057812492868 7613.555135294856 0.9808492506446761 1.0580045965762563 1.079499737870615 1.1170689032402497 1.0429614814653847 1.0129927905959248 0.8313110196279873 0.8458127798973604 0.9110842478504487 0.9860121426968738 1.0 12.894354559467159 -7.532249036535858 24.768066232279097 0.9374131331459095 1.057283981198145 0.5650478883212198 0.05778972156896692 134.3376592077407 355087.44519836403 0.01029433526799379 0.0152801150044144 2.935965604826023e-08 7.532249036535858 0.11987084805223547 S(ph)PDGAPVQVFVPEK ddPTM_A549_PD325901_60min_R1 2 SPDGAPVQVFVPEK 14 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 S(1)PDGAPVQVFVPEK;S(1)PDGAPVQVFVPEK 76.655 0.00051382 1298700.0 1804.8 1616.0 2086.0 1911.8 2008.3 2291.0 1725.7 1933.6 2387.7 1719.1 2300.0 True False 1988.0219673764634 1752.1859913524943 2227.5685041370193 2029.8875439871745 1867.243936258879 2272.342855578629 1791.372457839275 1895.0328311201442 2287.353272450417 1610.5557326165595 2017.114580901266 0.985577114061709 0.8686596229796727 1.1043341440433794 1.0063322942617376 0.9257004802496528 1.1265313716404373 0.8880866138198619 0.93947703767697 1.133972900750341 0.798445337645097 1.0 10.978077322308012 -8.74880045049524 24.99653655085977 1.063264985940181 0.9817913548902771 0.0 0.1137103927455801 308.69067849683927 610510.4259490378 0.014414758897198886 0.01629007529768076 1.7831979225142885e-09 8.74880045049524 -0.0814736310499039 S(ph)PDKPGGS(ph)PSASR ddPTM_A549_MK2206_60min_R1 2 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 S(1)PDKPGGS(0.597)PS(0.385)AS(0.018)R;S(1)PDKPGGS(0.545)PS(0.406)AS(0.05)R 76.34100000000001 0.0031582 9660600.0 2148.46 2311.24 2032.82 2063.5699999999997 3521.0 2621.03 2224.98 2582.6400000000003 3858.3999999999996 2829.6 2932.7 True False 2511.0675231961127 2428.8722438957857 2321.104443285253 2569.144742637176 3003.0655642404977 2898.385654901096 2629.2300653923835 2948.737129003285 2984.478560598703 2190.391394757452 2204.429651597615 1.1391007743777481 1.101814359163383 1.0529274280098169 1.1654464640208597 1.3622868672919946 1.3148007026672641 1.1927030937398722 1.337641746411027 1.3538552062370255 0.9936317964014008 1.0 11.106189722645166 -6.516297076664587 24.55732385560817 1.2104549925723767 1.1001429752218204 0.16055752285717473 0.12286340559349995 445.58190697978387 1662538.3379245636 0.02139783191356148 0.045899944220201556 3.0458108073530654e-07 6.516297076664587 -0.11031201735055629 S(ph)PDKPGGS(ph)PSASR ddPTM_A549_PD325901_60min_R1 2 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 S(1)PDKPGGS(0.593)PS(0.399)AS(0.008)R;S(1)PDKPGGS(0.492)PS(0.492)AS(0.017)R 82.663 0.0012423 29525600.0 6407.1 6778.599999999999 7043.200000000001 6928.1 8226.8 7055.400000000001 6970.0 7002.799999999999 8023.0 8174.5 8697.8 True False 7057.544075342272 7349.856411498767 7521.193906202228 7356.033002143292 7648.977948919259 6997.9431616104175 7235.247164130344 6863.12366040967 7685.821210734045 7658.360674931106 7628.025739896972 0.9252124096054236 0.9635332472800542 0.9859948252224715 0.96434297064166 1.0027467407343293 0.9173989968346562 0.9485084884136832 0.8997247642353089 1.0075767272958696 1.0039767740787073 1.0 12.897093996529728 -8.850654369704325 24.999999998849212 1.0035783291236944 0.9534884745812823 0.4091281038227542 0.02820074899612988 14.51827905150069 4064.4948236168666 0.004863053157187793 0.005177113778946254 1.4104108176982033e-09 8.850654369704325 -0.050089854542412104 S(ph)PDKPGGSPS(ph)ASR ddPTM_A549_MK2206_60min_R1 1 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 S(1)PDKPGGS(0.087)PS(0.902)AS(0.011)R 69.422 0.00096645 9234100.0 3019.1 3800.1 3360.0 2744.0 5782.2 3801.1 3226.4 3965.6 4845.7 4925.0 5477.3 True False 3528.650270091783 3993.5088584605564 3836.4985239413504 3416.2801231828425 4931.6460396340235 4203.329879034026 3812.595116801946 4527.735944140657 3748.1566869928292 3812.4390794389483 4117.135244210326 0.8570644539923499 0.9699727168487803 0.9318368954083746 0.8297711686753422 1.197834354984839 1.0209355849907797 0.926031060593252 1.099729709027104 0.9103797822195983 0.9259931610942698 1.0 12.007425125341385 -3.931836753421032 0.8292003880388695 0.9775664063782685 7.495615278653139e-08 0.12796848780456116 0.09487005305842715 30.97778568241576 2.760328224889728 0.01432884827090899 45.79897528827063 0.00011699390757704573 3.931836753421032 -0.9775663314221157 S(ph)PDKPGGSPS(ph)ASR ddPTM_A549_PD325901_60min_R1 1 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 S(1)PDKPGGS(0.243)PS(0.741)AS(0.016)R 82.59 0.0016392 4774500.0 1693.9 1718.3 1857.3 2001.2 1830.2 1857.0 1739.5 1705.9 2085.2 2310.9 2120.4 True False 1865.8634810167264 1863.1071713743738 1983.3475468521985 2124.809578945042 1701.6530658472345 1841.8772076863888 1805.6976243909241 1671.87448624734 1997.56629547833 2164.9893796193387 1859.6042423230626 1.0033658982654527 1.0018836959884192 1.0665428168600823 1.1426138586835437 0.9150619401262972 0.9904673079178778 0.9710117794392655 0.8990485438766228 1.0741889322552425 1.164220499365382 1.0 10.860779906861685 -4.182914251353678 12.540342335005397 1.0190008182414383 1.0169949764379758 0.0 0.08027358581213798 0.0 0.0 0.009018282614099085 0.0 6.562748307471386e-05 4.182914251353678 -0.002005841803462527 S(ph)PDKPGGSPSASR ddPTM_A549_MK2206_60min_R1 1 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 S(1)PDKPGGSPSASR 82.663 0.00014319999999999998 15420000.0 2347.9 2552.6 2491.8 2261.8 3828.6 2997.4 2629.9 2611.3 3687.6 3648.2 3641.1 True False 2744.168119356262 2682.5164369638755 2845.17470891579 2815.941101536061 3265.418011715753 3314.582878486911 3107.7187880230085 2981.4597717708557 2852.364487887149 2824.0690862150614 2736.914380752234 1.0026503344989675 0.9801243531142514 1.0395556137688897 1.0288743854537776 1.1931019964235274 1.21106560796977 1.1354826478601276 1.089350764035011 1.0421825790192178 1.031844147583043 1.0 11.418334588054682 -4.211456849326421 13.738641375272627 1.0511391014715794 1.0704026490150242 0.0 0.07710429065407644 0.0 0.0 0.011459320969863775 0.0 6.145300872129987e-05 4.211456849326421 0.019263547543444837 S(ph)PDKPGGSPSASR ddPTM_A549_PD325901_60min_R1 2 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 S(1)PDKPGGSPSASR;S(0.992)PDKPGGS(0.005)PS(0.002)AS(0.001)R 84.94 9.4305e-05 39880700.0 7449.400000000001 6352.0 8078.700000000001 6418.7 8696.5 7388.1 7512.799999999999 6597.7 7072.700000000001 7818.0 8879.0 True False 8205.657604041566 6887.305332345936 8626.969163169579 6815.168521074629 8085.687841296297 7327.933763116751 7798.703715161908 6466.103697704474 6775.459014976784 7324.3701457717725 7786.939288618409 1.053771873633992 0.8844688621641881 1.1078767720430258 0.8752050412202206 1.0383653373430748 0.9410544363466976 1.0015107895551072 0.8303780802754553 0.8701055400393284 0.9405967960322049 1.0 12.926840662907457 S(ph)PDNSIK ddPTM_A549_MK2206_60min_R1 1 SPDNSIK 7 0 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 S(1)PDNSIK 109.66 0.008613500000000001 31099000.0 14496.0 13064.0 12807.0 10074.0 13196.0 9924.0 9977.8 9414.0 13292.0 16553.0 17633.0 True False 16942.570406826682 13728.90179914443 14623.225177415728 12542.13045223904 11254.8858806355 10974.151092981954 11790.63710526483 10748.46332916587 10281.383222962359 12813.665803442218 13254.239453957365 1.2782755635041798 1.0358121148207673 1.1032866297771329 0.9462731147877589 0.8491536553064981 0.8279729011312953 0.8895747769023788 0.8109453104800113 0.775705257074755 0.9667597939477695 1.0 13.69416626835259 -5.620555230822498 0.8982003724756027 0.877236174852373 1.3288855772192176 0.7187569903383075 0.07495528269512924 0.6932465772716033 0.5817605556865045 0.01457015381853767 0.2694210076030782 2.395768051759038e-06 5.620555230822498 0.4516494023668446 S(ph)PDNSIKMPEEEDEAPVLDVR ddPTM_A549_MK2206_60min_R1 1 SPDNSIKMPEEEDEAPVLDVR 21 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 S(0.998)PDNS(0.002)IKMPEEEDEAPVLDVR 84.10700000000001 1.8667e-05 1211500.0 585.82 759.27 663.43 639.28 813.28 757.85 516.51 560.15 1257.8 1089.2 948.93 True False 684.6920940761049 797.9135998956208 757.5143499221451 795.9036286983695 693.6475893455017 838.0451839798837 610.3531811862673 639.5529778874294 972.9103082938649 843.1489635177463 713.2844918643312 0.9599144547311079 1.1186470601794414 1.0620087196094914 1.1158291506073466 0.972469747004447 1.1749101425007322 0.8556938895320302 0.8966309869093217 1.3639863468094513 1.1820654635487515 1.0 9.47833379679513 -8.745392761427203 24.99972930756281 1.1718824737708529 1.0255957333722305 0.2631908362677231 0.12045654218941144 331.04526239373416 515749.7451876587 0.026158349085449267 0.02961523455698769 1.7972448117497852e-09 8.745392761427203 -0.14628674039862233 S(ph)PDNSIKMPEEEDEAPVLDVR ddPTM_A549_PD325901_60min_R1 1 SPDNSIKMPEEEDEAPVLDVR 21 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 S(0.911)PDNS(0.089)IKMPEEEDEAPVLDVR 62.032 0.00050695 3274100.0 1432.0 1379.6 1437.4 1317.2 1420.0 1959.1 1631.5 1667.6 1817.9 1723.5 2036.4 True False 1577.3755858173172 1495.8637337066202 1534.950607788376 1398.560452421753 1320.2640987340587 1943.1457391375359 1693.5876252910568 1634.3384097931082 1741.4999849175413 1614.6779158656495 1785.9357098031905 0.8832208108942193 0.8375798330789096 0.8594657687636063 0.7830967513247573 0.7392562293743213 1.0880267013372333 0.9482914843993402 0.9151160373926404 0.9751190792357548 0.9041075258210647 1.0 10.802464431852732 -7.256957827491449 24.99919392306411 0.9847886169953118 0.8215555859566244 0.6211761887290683 0.05833101302840715 166.25450968617653 927407.1364099382 0.007803856167192111 0.01322914595284602 5.53403845323977e-08 7.256957827491449 -0.16323303103868747 S(ph)PDPGIVPQEAPVGNSLSELSEENFDGK ddPTM_A549_MK2206_60min_R1 1 SPDPGIVPQEAPVGNSLSELSEENFDGK 28 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 S(0.994)PDPGIVPQEAPVGNS(0.004)LS(0.001)ELSEENFDGK 50.261 0.0029658 1332700.0 372.12 393.89 318.56 274.12 524.75 379.35 595.13 367.41 979.12 728.58 757.93 True False 434.92475853948326 413.93731855978257 363.7365981508204 341.2794123057146 447.5599701321217 419.4925652078501 703.2574175125037 419.491492645935 757.3508833333508 563.9932719792142 569.715063196161 0.7634075112908371 0.7265690259926619 0.6384535387044535 0.5990352622784825 0.7855856357760026 0.7363199471231336 1.2344020071492512 0.7363180644944578 1.3293502879922696 0.9899567492829714 1.0 9.154096741166912 -7.685353207164717 1.4619885829615382 1.1351201118542518 0.6823105002294855 0.4788878534725889 0.16530817252857952 0.20983801564429624 0.9110039292308616 0.028997750804120023 0.04742254378562203 2.0637010865857356e-08 7.685353207164717 -0.4528096116247663 S(ph)PDPGIVPQEAPVGNSLSELSEENFDGK ddPTM_A549_PD325901_60min_R1 1 SPDPGIVPQEAPVGNSLSELSEENFDGK 28 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 S(1)PDPGIVPQEAPVGNSLSELSEENFDGK 76.891 2.1025e-06 1593900.0 1749.2 1618.3 1674.6 1662.3 1792.0 1775.4 1863.7 1990.9 2009.2 1646.2 2174.0 True False 1926.7774963070196 1754.6798204243432 1788.2484261878487 1764.9764956427862 1666.1361020643885 1760.9417310319948 1934.6241233557726 1951.189937669164 1924.7603111812102 1542.2586510577503 1906.6117821214568 1.0105767279813642 0.9203131108693448 0.9379195297944152 0.925713620461804 0.8738727609301277 0.9235974242604452 1.0146922102847529 1.023380824542113 1.0095187332995288 0.8089001995685264 1.0 10.896795401503583 -7.760346512280164 24.99967936308031 1.0070213011911786 0.9288090174942472 0.0 0.06710226969343427 14.686452338551508 335951.00335843867 0.004627108910634593 0.00665020179108554 1.7364148356295625e-08 7.760346512280164 -0.07821228369693145 S(ph)PDPYR ddPTM_A549_MK2206_60min_R1 2 SPDPYR 6 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6 P18583-5 SON Protein SON 1 S(1)PDPYR;S(1)PDPYR 104.75 0.029158999999999997 221644000.0 4109.1 3731.5 3793.2 3236.1 4822.0 3750.8 3775.2 3775.8 5764.5 4434.299999999999 4547.1 True False 4802.6156221503525 3921.417411474848 4331.132797920929 4028.9446452740517 4112.690187664776 4147.707166420464 4461.10497301968 4311.031212902539 4458.849954014933 3432.588550244899 3417.9295764242897 1.4051242176776122 1.147307843474437 1.2671802332603934 1.1787676004398497 1.203269434230801 1.2135145191492331 1.305206814028837 1.2612990164099807 1.3045470523355884 1.0042888460668475 1.0 11.738906956459603 -10.799425059060104 0.9767218771148731 0.9956076700062876 1.2509802926544524 0.6717545191481487 0.06764071578543691 0.26818880905259945 0.4414690547210395 0.048855832991638044 0.011399394990544764 1.586992743446544e-11 10.799425059060104 0.25537262264816485 S(ph)PDPYR ddPTM_A549_PD325901_60min_R1 2 SPDPYR 6 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6 P18583-5 SON Protein SON 1 S(1)PDPYR;S(1)PDPYR 101.41 0.03228 297500000.0 2966.6 3169.7 3258.5 3440.9 3523.0 3532.6 3529.2 3597.0 3062.3 3798.2 4091.8999999999996 True False 3267.7670481045075 3436.821743063118 3479.6414049522905 3653.436578149111 3275.5566336902016 3503.8316768297977 3663.50563725234 3525.2550132080873 2933.6021804351085 3558.3810037951334 3588.622240691256 0.9105909814221783 0.9576995048665535 0.9696315665373647 1.0180610644171257 0.9127616154603249 0.9763723908022357 1.020866893068873 0.9823421850411976 0.8174731090865739 0.9915730230523518 1.0 11.809214349313748 S(ph)PDREASGSGGR ddPTM_A549_MK2206_60min_R1 3 SPDREASGSGGR 12 1 Q8N5F7;A0A494C050 Q8N5F7 NKAP NF-kappa-B-activating protein 1 S(0.999)PDREAS(0.001)GSGGR;S(0.999)PDREASGSGGR;S(1)PDREASGSGGR 81.992 0.00019167 31471500.0 2717.02 2746.5699999999997 2551.9 2531.87 3378.3999999999996 2513.15 2125.3500000000004 2514.41 3831.55 4150.87 4514.49 True False 3175.586551238706 2886.35868145102 2913.7977926327153 3152.1782636599623 2881.4418353394162 2779.089864906044 2511.4985840239956 2870.835317557675 2963.7100427280616 3213.1855840955855 3393.417539414507 0.9358077850291936 0.8505757537721179 0.8586617351943834 0.9289096396324493 0.84912681739618 0.8189649026761212 0.7401089181784934 0.846001202095809 0.8733702847659042 0.9468877751630829 1.0 11.728523240493894 -10.227489126755223 0.8162506849816696 0.9941730545855028 0.8531028346384666 0.4276366622187163 0.05154365074962076 0.36270721148838314 0.4677731664218733 0.027759589991248123 0.010505917608475744 5.922579147980422e-11 10.227489126755223 -0.14107021994703617 S(ph)PDREASGSGGR ddPTM_A549_PD325901_60min_R1 3 SPDREASGSGGR 12 1 Q8N5F7;A0A494C050 Q8N5F7 NKAP NF-kappa-B-activating protein 1 S(1)PDREASGSGGR;S(1)PDREASGSGGR;S(1)PDREASGSGGR 101.39 6.3499e-05 83904000.0 3405.04 3691.3700000000003 3538.8999999999996 3013.91 3337.08 3147.35 2967.46 3186.28 4422.3 3634.3900000000003 3781.29 True False 3750.7171541420385 4002.454704764141 3779.071035134464 3200.0723756137595 3102.6950131010203 3121.7190251005673 3080.3883141564174 3122.727145811697 4236.446109962508 3404.913995151123 3316.215301572237 1.1310234146630351 1.2069345144347394 1.139573487084142 0.964977266131239 0.9356132611866348 0.9413499249040139 0.9288867078973996 0.9416539222683141 1.2774942893345869 1.0267469646909937 1.0 11.695321959899609 -6.016042541890499 22.847423961674522 1.0686964612147747 1.170047783022085 0.12428106271614647 0.110095641498798 465.08584868258544 662375.2672494506 0.020708739240059643 0.056747971596521805 9.637346151009518e-07 6.016042541890499 0.10135132180731032 S(ph)PDSPKTPK ddPTM_A549_PD325901_60min_R1 1 SPDSPKTPK 9 1 O00716 O00716 E2F3 Transcription factor E2F3 1 S(0.573)PDS(0.355)PKT(0.073)PK 60.255 0.0022776999999999997 14837000.0 6217.6 6575.9 7691.4 6487.6 8776.3 7331.3 7342.6 7067.5 8638.9 7660.1 9384.8 True False 6848.806174844803 7130.0741711230585 8213.384656145474 6888.324317591374 8159.88296459135 7271.5963234847695 7622.02666102489 6926.533168153504 8275.83707558399 7176.439978719157 8230.529095148782 0.8321222239383868 0.8662959681809094 0.9979169700021577 0.8369236337007147 0.9914165748348946 0.8834907500382662 0.9260676407203816 0.8415659659396775 1.0055048685098402 0.8719293614974372 1.0 13.006769461167053 -8.783364327936411 24.848343294400813 1.0025995433503085 0.9009836930258474 0.050935626570566495 0.0668638867968373 139.1212097426231 157670.41339730835 0.008616298013837318 0.009176596555676313 1.6467803343459554e-09 8.783364327936411 -0.10161585032446119 S(ph)PDSTANVR ddPTM_A549_MK2206_60min_R1 2 SPDSTANVR 9 0 B7ZM87;O75044;E9PDX4;A0A087WW56;A0A286YEY3;A0A075B7B5;P0DMP2 B7ZM87 SRGAP2;SRGAP2B SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B 1 S(1)PDSTANVR;S(1)PDSTANVR 119.53 0.00015141 26710000.0 4697.0 5367.0 5182.1 4425.200000000001 7197.7 5722.0 4700.8 4932.6 6847.2 7019.200000000001 6714.1 True False 5489.738769375339 5640.157375689539 5916.999702653712 5509.374198654776 6138.927864735532 6327.4982420438 5554.874511859216 5631.811155453959 5296.320132731558 5433.557844953883 5046.803670266837 1.0877654705924162 1.1175701977309789 1.1724251802212202 1.0916561369551911 1.2163991836858896 1.253763501703495 1.1006718063129086 1.1159164341251642 1.0494404931847743 1.0766334892251908 1.0 12.301154248960069 -8.76027898322482 1.3118529461907704 1.016670479022865 1.1535745077434536 0.43316911461430785 0.052408633824575473 0.20887263110378557 0.7077055497617388 0.010438997775693046 0.011131124412609945 1.7366848541889379e-09 8.76027898322482 0.1369040287205887 S(ph)PDSTANVR ddPTM_A549_PD325901_60min_R1 2 SPDSTANVR 9 0 B7ZM87;O75044;E9PDX4;A0A087WW56;A0A286YEY3;A0A075B7B5;P0DMP2 B7ZM87 SRGAP2;SRGAP2B SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B 1 S(1)PDSTANVR;S(1)PDSTANVR 151.22 2.114e-05 34209000.0 6853.299999999999 6306.799999999999 6014.299999999999 5869.9 7326.6 6513.8 7194.4 6788.4 6103.7 7481.3 8015.6 True False 7549.041970867195 6838.296169716526 6422.466564923906 6232.470391489859 6812.004891397851 6460.753772443511 7468.186828926742 6653.000036603218 5847.182715188512 7008.929441233353 7029.732015074863 1.0738733645434422 0.9727676894442329 0.9136147083774018 0.8865871953759658 0.9690276779811651 0.919061175957887 1.0623714834237832 0.9464087709654132 0.8317788932280148 0.9970407728492494 1.0 12.779253977104743 -8.528341717152935 24.996969104129537 0.9189060247991662 0.9664910241415638 0.0003682191048871575 0.06906675722139928 323.33253849883585 1479468.1230594025 0.01340281161936275 0.015220608866596612 2.962499480405898e-09 8.528341717152935 0.04758499934239768 S(ph)PEAKPLPGK ddPTM_A549_PD325901_60min_R1 2 SPEAKPLPGK 10 1 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 S(1)PEAKPLPGK;S(1)PEAKPLPGK 62.14 0.002001 41561000.0 4669.4 5189.7 4699.8 5293.8 5422.799999999999 5024.5 5387.8 4789.799999999999 4507.2 5409.299999999999 5026.9 True False 5143.434050569402 5627.054232253737 5018.756690193268 5620.786002907894 5041.9212356443995 4983.582137867664 5592.835677317288 4694.263681474591 4317.778058210209 5067.755874843084 4408.623168144594 1.1666758201822132 1.276374509146793 1.1383954805793604 1.274952698049139 1.1436498524246368 1.13041690064997 1.2686127763718757 1.064791319746707 0.9793937684239367 1.1495098767935503 1.0 12.106112450959575 -8.470398088301662 4.187972175968977 0.9910525800234058 1.1981090764932025 0.4785135783063458 0.07057344762450898 0.06929925231379493 2.5239625065514204 0.008042470322005646 0.009611758799699385 3.3853370298600994e-09 8.470398088301662 0.20705649646979674 S(ph)PEAKPLPGKLPK ddPTM_A549_MK2206_60min_R1 2 SPEAKPLPGKLPK 13 2 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 S(1)PEAKPLPGKLPK;S(1)PEAKPLPGKLPK 44.294 0.012731000000000001 15227300.0 4654.2 5972.299999999999 5877.8 4919.700000000001 8542.7 6420.5 5818.5 5890.8 9260.3 7588.799999999999 8587.7 True False 5439.7151757348765 6276.264560244204 6711.360423816211 6125.026720853728 7286.080146446262 7099.9130484170255 6875.64613411608 6725.838939818389 7162.85683566042 5874.484809349501 6455.137081537437 0.8426955317948547 0.9722898957785371 1.0396929358807279 0.9488608287455477 1.1287258588644746 1.0998857125317656 1.065143318765663 1.041935880657778 1.1096366731153018 0.9100480338599347 1.0 12.656232017646815 -4.399035647596299 0.822231882539191 1.0579315943944703 0.1710233501144959 0.4321189783095776 0.06429304963539403 4.338402978116397 0.7592473418577276 0.00825846956611922 4.916970966723574 3.989921510943611e-05 4.399035647596299 -0.8869082442799744 S(ph)PEAKPLPGKLPK ddPTM_A549_PD325901_60min_R1 2 SPEAKPLPGKLPK 13 2 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 S(1)PEAKPLPGKLPK;S(1)PEAKPLPGKLPK 56.215 0.003315 29041000.0 10974.4 9940.3 11069.8 11987.3 13676.9 13387.9 11928.8 14567.8 14172.1 11428.4 14035.2 True False 12088.513009073718 10778.003966485887 11821.063196115043 12727.72829586643 12716.281726743544 13278.873381144092 12382.757011689828 14277.233800781989 13576.495921805314 10706.80887361706 12308.959376463241 0.9820905764128971 0.8756226775023084 0.9603625159994325 1.0340214722134793 1.0330915342087463 1.0787974007401053 1.0059954406355178 1.1599058347761235 1.1029767429215676 0.8698386716662858 1.0 13.587421178262506 -6.2517225804140475 2.4931314084143033 1.056006202439548 0.926256725466283 0.22801024388031033 0.07399492526688678 0.18811560726349436 2.279690766391992 0.007838829953590393 0.02346056713849053 5.601152789158288e-07 6.2517225804140475 -0.129749476973265 S(ph)PEAQPK ddPTM_A549_MK2206_60min_R1 1 SPEAQPK 7 0 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 S(1)PEAQPK 95.50200000000001 0.011887 65551000.0 3219.9 2760.9 2195.7 2064.3 1676.8 854.91 1075.1 1095.0 1626.7 3462.5 4233.9 True False 3763.340401003123 2901.418017242639 2507.0832764934567 2570.0535926699486 1430.144941243529 945.37600875667 1270.4317536801918 1250.2196032968582 1258.2550473061137 2680.3188451893107 3182.5057803045484 1.1825085831086823 0.9116772183725584 0.7877702193061037 0.8075566142173695 0.4493770129481656 0.29705398010815326 0.39919228475324825 0.39284126710281075 0.39536614673036213 0.8422039205009139 1.0 11.63594741912152 -3.3589509711255774 11.80252397538288 0.6742056239513341 0.9425915485558742 0.0 0.2868560650085933 0.0 0.0 0.04351187130200657 0.0 0.0004375715011974332 3.3589509711255774 0.26838592460454014 S(ph)PEAQPK ddPTM_A549_PD325901_60min_R1 2 SPEAQPK 7 0 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 S(1)PEAQPK;S(1)PEAQPK 116.05 0.0071797 226830000.0 13674.3 13241.5 11832.8 11479.9 13191.400000000001 10214.1 8373.3 10321.0 11719.0 13728.0 16844.3 True False 15062.504869512393 14357.407676048295 12635.844964406773 12188.987350255451 12264.88157185948 10130.919756074061 8691.950513545566 10115.139558332135 11226.491183920274 12861.211737164858 14772.557884815304 1.019627405555481 0.9718972020956681 0.8553593130540477 0.825110143097459 0.8302476570064103 0.6857932008164694 0.5883849351830946 0.6847249905671026 0.7599558093767886 0.8706150849058364 1.0 13.850632031531266 -5.721156212632233 2.444641189756228 0.8269609895670582 1.017061677180604 0.3059989905114827 0.1101647075689717 0.4214563410973348 4.78394124031281 0.020588673153283978 0.11188970609081533 1.9003945985699153e-06 5.721156212632233 0.19010068761354582 S(ph)PEASQTDSPVESPR ddPTM_A549_MK2206_60min_R1 2 SPEASQTDSPVESPR 15 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 S(0.99)PEAS(0.005)QT(0.005)DS(0.001)PVESPR;S(1)PEASQTDSPVESPR 77.64 0.00054976 3664300.0 854.27 854.3599999999999 1018.8199999999999 1086.1599999999999 1538.06 1081.93 1141.9299999999998 1157.54 2046.71 1200.67 1826.92 True False 998.449891103742 897.8432747333915 1163.3039958815257 1352.2692487595746 1311.8134114557624 1196.4191144729903 1349.4038996186594 1321.624839817575 1583.1334529242617 929.4378130984697 1373.2453435730608 0.7270732034713223 0.6538112646333714 0.8471202915967757 0.9847251658913997 0.9552651444224395 0.8712347870483328 0.9826386129281398 0.962409846137782 1.1528409401375366 0.6768184705292036 1.0 10.423373684608467 -5.687277065751576 0.44377010476221235 1.0648822115667378 0.4815060778016624 0.13242788874920042 0.13705320891240738 1.4350394493882308 0.237942605881254 0.019683560877494812 0.40847442410156426 2.054579422950688e-06 5.687277065751576 -0.5833761337650754 S(ph)PEAVGPELEAEEK ddPTM_A549_MK2206_60min_R1 5 SPEAVGPELEAEEK 14 0 Q96N64-3;Q96N64-2;Q96N64 Q96N64-3 PWWP2A PWWP domain-containing protein 2A 1 S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK 178.67 3.2400999999999997e-23 74272940.0 8075.4800000000005 8337.7 7619.3 7516.57 10802.080000000002 8814.85 7843.59 8666.093 13121.510000000002 11698.38 14299.89 True False 9438.423597469699 8762.05331680393 8699.831310555452 9358.129987431648 9213.108341428855 9747.631576176136 9268.668773926533 9894.538221546736 10149.50893574577 9055.707833122231 10748.832656113553 0.8780882445035982 0.815163245826549 0.8093745236239489 0.8706182603102559 0.8571264095537637 0.9068549011814814 0.8622953831786416 0.9205221197595885 0.9442429015743482 0.842482911664986 1.0 13.391892368417015 -8.485854544829477 0.40023362087623576 1.0005716141832082 0.8270723096258049 0.10273492666691164 0.051371275899406585 0.23999332471752916 0.09918380462637802 0.011441558575495723 0.013489332051292623 3.2669723223786165e-09 8.485854544829477 -0.17349930455740326 S(ph)PEAVGPELEAEEK ddPTM_A549_PD325901_60min_R1 4 SPEAVGPELEAEEK 14 0 Q96N64-3;Q96N64-2;Q96N64 Q96N64-3 PWWP2A PWWP domain-containing protein 2A 1 S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK 202.4 1.5e-31 90208600.0 10480.0 10579.1 10557.099999999999 12326.3 11913.4 10795.8 11814.1 10893.5 10678.2 11328.9 13173.899999999998 True False 11543.921885031757 11470.637884354686 11273.568290999476 13087.66755594158 11076.643882998822 10707.882584136083 12263.692040423577 10676.220596714575 10229.432388440771 10613.591320597836 11553.593816232695 0.9991628638365884 0.992819902344026 0.9757629072228776 1.132778922654657 0.9587184783522714 0.9268010243783718 1.061461241885897 0.9240605794635589 0.885389650280808 0.9186398180006844 1.0 13.496054060142662 -7.6411148527384745 1.1245577262731803 0.9461299901684599 1.0135162159891813 0.20034975701845759 0.060321350090536886 0.6609263589534483 1.6850702425260027 0.011642271416507267 0.020571991493475557 2.2849944379401868e-08 7.6411148527384745 0.0673862258207214 S(ph)PEDGPSAR ddPTM_A549_MK2206_60min_R1 1 SPEDGPSAR 9 0 H0YEB0;Q8TDY4-2;Q8TDY4-3;Q8TDY4 H0YEB0 ASAP3 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 1 S(0.998)PEDGPS(0.002)AR 53.683 0.021345 1715800.0 229.26 162.0 256.28 89.569 243.38 120.39 86.685 77.704 339.3 178.56 333.62 True False 267.9534831311457 170.24510804205423 292.6243576534788 111.51340902090519 207.57912440353653 133.12958989158577 102.4345424311854 88.71877995851969 262.44909175076185 138.22317198469415 250.77294655641447 1.068510327013549 0.678881475772569 1.166889657244783 0.4446787843433457 0.8277572491530263 0.5308770013660011 0.40847525156842024 0.3537813036724889 1.0465606252774986 0.5511885308314114 1.0 7.970237908033896 -8.812581747791638 24.999973493397214 1.0219872923445172 0.6832364677651894 0.0 0.28447052935427825 95.98135242370566 46918.18509513176 0.042454850054200785 0.04519624271643008 1.5396366910489684e-09 8.812581747791638 -0.3387508245793278 S(ph)PEDQLGK ddPTM_A549_MK2206_60min_R1 1 SPEDQLGK 8 0 Q9UK61-2;Q9UK61-3;Q9UK61 Q9UK61-2 FAM208A Protein FAM208A 1 S(1)PEDQLGK 81.33800000000001 0.0037411000000000002 10733000.0 1910.0 1626.6 1640.4 1666.9 2384.9 1582.0 1877.1 1747.7 3027.2 2195.2 2382.4 True False 2232.3613049833734 1709.3869922296642 1873.0333865099365 2075.290574829985 2034.084369257927 1749.4061899533897 2218.144772424042 1995.4418271067746 2341.5440334450527 1699.3027953673864 1790.784329104974 1.246583002040842 0.95454654390683 1.0459290692174363 1.1588724231617584 1.1358622790018233 0.9768938456300514 1.2386442836098868 1.1142837217612283 1.3075522246809843 0.9489153817962492 1.0 10.806375883255482 -7.772525324109292 24.99416165527231 1.1524774361387096 1.0841487056237389 0.0 0.12136439529562086 529.7193400994121 1194293.4563420024 0.020427531552439426 0.028366722349817883 1.688397404616121e-08 7.772525324109292 -0.06832873051497068 S(ph)PEDQLGK ddPTM_A549_PD325901_60min_R1 2 SPEDQLGK 8 0 Q9UK61-2;Q9UK61-3;Q9UK61 Q9UK61-2 FAM208A Protein FAM208A 1 S(1)PEDQLGK;S(1)PEDQLGK 117.02 0.0012725999999999998 29972000.0 10123.2 10654.099999999999 9826.900000000001 10843.3 11937.8 10888.8 10254.9 9550.5 11052.1 10984.1 13414.1 True False 11150.899811694037 11551.958397567194 10493.812527950176 11513.066014078951 11099.330111174258 10800.125222970133 10645.155831196595 9360.007785277692 10587.618671713051 10290.562051441764 11764.250738985938 0.9478631541523254 0.981954452847964 0.892008574177562 0.9786484723523805 0.9434795600192218 0.9180461605752113 0.9048732526517189 0.7956314424903622 0.8999824048824795 0.874731615277421 1.0 13.522121818295135 -4.318163441668802 16.00781826958093 0.9367917707470403 0.9397816089972678 0.0 0.05757413292590773 0.0 0.0 0.00814262885165228 0.0 4.8065842420914244e-05 4.318163441668802 0.0029898382502274723 S(ph)PEEEAHLAR ddPTM_A549_PD325901_60min_R1 1 SPEEEAHLAR 10 0 H3BSZ2 H3BSZ2 PRDM11 1 S(1)PEEEAHLAR 114.72 2.8784e-05 3606200.0 147.92 160.8 148.48 105.98 229.93 0.0 0.0 172.24 183.99 223.95 254.97 True False 162.9367295070514 174.3511803276491 158.55674568277306 112.52614390195664 213.780510015438 0.0 0.0 168.80453808033394 176.25754014246013 209.80975878045385 223.61030638799824 0.7286637728778528 0.7797099478282679 0.7090761970857137 0.5032243178751631 0.9560405039850711 0.0 0.0 0.7549049988216202 0.7882353143268191 0.9382830432529424 1.0 7.804842874521961 -8.727026726714172 2.658219544108698 0.9076576702975585 0.5330833482932119 0.2512492938548765 0.28845814439065837 0.3004261078798902 4.212198988534466 0.055116665824834 0.060485027206203655 1.8748791234552776e-09 8.727026726714172 -0.3745743220043466 S(ph)PEGTPQK ddPTM_A549_MK2206_60min_R1 1 SPEGTPQK 8 0 C9J0I9;Q86WB0;Q86WB0-3;F8WAU5;F8WBD7;F8WDK5;F8WF13 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(0.94)PEGT(0.06)PQK 45.137 0.052601 27773000.0 2145.2 2587.7 2276.7 1380.8 1619.2 1466.3 1261.9 1248.0 1946.6 3531.3 3844.3 True False 2507.2573148954607 2719.4028770396544 2599.5702944813297 1719.0960619864666 1381.0178249412706 1621.4628927488336 1491.1708957018263 1424.9078218397076 1505.698208081442 2733.576877405637 2889.654212717535 0.8676669007180432 0.9410824537660615 0.8996129305162088 0.5949141092455373 0.47791802176998605 0.5611269630853 0.516037832187359 0.49310668922551565 0.5210651853965009 0.9459875390539835 1.0 11.496681149206545 -4.974182532103893 18.47639557013141 0.7148791070421141 1.3258060565137928 0.049951534470074166 0.20010591373170683 62480601.39896231 1075786301.6998186 0.033087842556875045 1188572643.9860265 1.0612494248801352e-05 4.974182532103893 0.6109269494716787 S(ph)PEGTPQK ddPTM_A549_PD325901_60min_R1 2 SPEGTPQK 8 0 C9J0I9;Q86WB0;Q86WB0-3;F8WAU5;F8WBD7;F8WDK5;F8WF13 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(0.985)PEGT(0.015)PQK;S(0.561)PEGT(0.439)PQK 66.692 0.00836 115177000.0 15520.9 13863.0 12495.7 13602.599999999999 14160.2 10997.2 10678.3 11635.5 12391.0 15997.300000000001 17297.5 True False 17096.570342117313 15031.283662202735 13343.733344748305 14442.80170825396 13165.636402038035 10907.642449310044 11084.668549889975 11403.420824626826 11870.249360863218 14987.227747883711 15170.0171578868 1.1269974294807512 0.9908547568377708 0.8796122776836135 0.9520623185811782 0.8678722156351222 0.7190263752364464 0.7306958479033179 0.7517078396116551 0.7824809449666277 0.9879506128371083 1.0 13.888935096880223 -5.1437031028270415 1.0458542448982409 0.8594022437286432 1.3168951345387534 0.4513586993190787 0.09416440347115396 1.9722480304537449 1.433385576021768 0.01712484871745953 1.0602111767581788 7.182851654730986e-06 5.1437031028270415 0.45749289081011024 S(ph)PEIHR ddPTM_A549_MK2206_60min_R1 2 SPEIHR 6 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;Q9Y2W1;A0A3B3ITZ9 Q9NYF8-2;Q9NYF8-4;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 S(1)PEIHR;S(1)PEIHR 104.75 0.029158999999999997 158586000.0 4064.3999999999996 3584.2 3837.0 4130.6 5420.1 4823.4 4281.8 4790.5 6326.9 4947.0 5582.5 True False 4750.371354960432 3766.620470644019 4381.144296536594 5142.5971854296795 4622.810469963053 5333.8089864862095 5059.74763548307 5469.568045290956 4893.867251983189 3829.469264159287 4196.211180838031 1.1320620317330474 0.8976241443338849 1.0440714510611522 1.2255334547778036 1.1016629694599462 1.2711011807134518 1.2057895604940885 1.3034539515712888 1.16625857019089 0.912601653998381 1.0 12.034871570270582 -4.916301143355837 21.168025372415805 1.1109342999136003 2.3838699747083036 0.001589085253829059 0.13129030553347956 10200.403414358403 2658287.4338041977 0.01751678979064713 18944.65011285671 1.2125477683241713e-05 4.916301143355837 1.2729356747947034 S(ph)PEIHR ddPTM_A549_PD325901_60min_R1 2 SPEIHR 6 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;Q9Y2W1;A0A3B3ITZ9 Q9NYF8-2;Q9NYF8-4;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 S(1)PEIHR;S(1)PEIHR 101.41 0.03228 190433000.0 7184.4 6676.5 6923.6 7112.1 8203.099999999999 7136.0 7423.6 7006.2 7104.0 7868.200000000001 8192.599999999999 True False 7913.754999124257 7239.152086178786 7393.477130989009 7551.398264248967 7626.942555158697 7077.88678193326 7706.109160349795 6866.455844742424 6805.443584825458 7371.400509204587 7184.962137170305 1.1014330831590124 1.0075421342484379 1.029021028898675 1.051000425622699 1.061514648170778 0.9850972972170434 1.07253302289283 0.9556704285496318 0.9471787679462546 1.0259484139895145 1.0 12.810764838747543 -8.269034888197508 24.98164311359032 0.9729057270643366 1.0407154023732692 0.39803124602897966 0.035770157524472324 368.3017400845858 1211343.1361358392 0.0054226301749576876 0.0066252191924139085 5.382265434032209e-09 8.269034888197508 0.06780967530893256 S(ph)PEIMSTISGTR ddPTM_A549_MK2206_60min_R1 2 SPEIMSTISGTR 12 0 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.998)PEIMS(0.001)TISGTR;S(1)PEIMSTISGTR 52.816 0.024033000000000002 8090100.0 4245.8 4325.9 4161.6 3718.8999999999996 6636.9 5253.5 5073.200000000001 4969.4 7760.799999999999 6740.6 6358.0 True False 4962.387240156232 4546.069832587177 4751.777457510212 4630.030666947762 5660.620801848264 5809.421883008936 5994.934771435544 5673.8276681492325 6002.991191450968 5217.893778449984 4779.13312812686 1.0383446342916998 0.9512331443189928 0.9942760182896663 0.9688013584929078 1.184445097068659 1.2155806769262123 1.2543979442952253 1.1872085409709103 1.2560836935303763 1.0918075806971905 1.0 12.222533240698722 -6.757726093944417 24.99648949066779 1.1498382801383744 0.9859624479127463 0.5782262574695326 0.07340409227378322 83.60575427392948 562795.6120270176 0.01517988332236247 0.03066328037403751 1.7469235762795302e-07 6.757726093944417 -0.16387583222562807 S(ph)PEPDGPAPAFLR ddPTM_A549_MK2206_60min_R1 2 SPEPDGPAPAFLR 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR 86.911 0.00019569 4007600.0 1557.9099999999999 2203.6 1734.35 1743.42 2530.6 2280.6 1660.92 1569.51 2926.2 2935.8 2813.2 True False 1820.8471207574064 2315.7538276634014 1980.3069092254998 2170.5579782650984 2158.3520922655503 2521.9315782602416 1962.6876647032868 1791.9928489227864 2263.4203721811937 2272.6007409983476 2114.604799629833 0.86108152269216 1.0951236978506718 0.9364903123137513 1.0264603478839451 1.020688164825586 1.1926254866638495 0.9281581433310188 0.8474362912807534 1.0703751228491543 1.0747165339812774 1.0 11.04617234664129 -5.242870562297192 23.33759747562548 1.0212430961540002 0.861081173208491 0.20753331236968564 0.08874841029179643 1860.7782568226382 2338564.7985901227 0.011579690055922345 0.48812098726432457 5.7164898630627994e-06 5.242870562297192 -0.16016192294550924 S(ph)PEPDGPAPAFLR ddPTM_A549_PD325901_60min_R1 1 SPEPDGPAPAFLR 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(1)PEPDGPAPAFLR 47.915 0.033573 5674300.0 1079.2 1193.2 1579.7 1534.3 1303.9 1677.7 1536.6 1488.7 1474.7 1582.4 1896.9 True False 1188.75958953495 1293.7551515357636 1686.9079415077892 1629.0702263518785 1212.318562210802 1664.037367439662 1595.076153859784 1459.006710637443 1412.7234874073918 1482.4869939459263 1663.593325439831 0.7145734305111248 0.7776871497087262 1.0140146126528815 0.9792478735277295 0.7287349279850481 1.0002669173968424 0.9588137494108231 0.8770212577353914 0.84920002130562 0.8911354543659145 1.0 10.700087086484064 -14.999999198610007 0.01599198443810244 2.0475773186175736 4.399107606913641e-06 0.12293936627788882 0.09925949949905709 5208.332255642549 6.477574479768828 523.5989117780357 327.39960697878826 1.000001845270353e-15 14.999999198610007 -2.0475729195099666 S(ph)PEPEATLTFPFLDK ddPTM_A549_MK2206_60min_R1 2 SPEPEATLTFPFLDK 15 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(1)PEPEATLTFPFLDK;S(1)PEPEATLTFPFLDK 308.03 1.2538999999999996e-142 85462000.0 30099.0 27760.0 28163.0 26267.0 45905.0 36989.0 32290.0 36866.0 44690.0 39464.0 39696.0 True False 35178.97535010187 29172.865427453267 32156.93688385719 32702.416179170454 39152.43530998578 40903.15142868899 38156.67503147001 42091.86839738994 34567.7863552654 30549.054991061643 29838.38764613462 1.1789837898516307 0.9776957714145266 1.0777035698181543 1.0959846948501875 1.3121498310937636 1.370823112621762 1.2787780453818514 1.4106616247692152 1.1585004781497785 1.0238172167127497 1.0 14.864881959453177 -3.9739666058351997 12.731053031139819 1.1394874496477494 1.134516409309384 0.0 0.14860254568022926 0.0 0.0 0.02197116961931824 0.0 0.00010617771971941991 3.9739666058351997 -0.004971040338365373 S(ph)PEPEVLSTQEDLFDQSNK ddPTM_A549_MK2206_60min_R1 2 SPEPEVLSTQEDLFDQSNK 19 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(1)PEPEVLSTQEDLFDQSNK;S(0.999)PEPEVLSTQEDLFDQSNK 99.569 1.0765999999999999e-07 3957400.0 795.51 887.12 678.09 725.96 1402.74 1130.52 932.19 1037.53 1389.6399999999999 997.6700000000001 1336.31 True False 929.772639647813 932.2706188041188 774.2533583629134 903.8202325895827 1196.3988041984421 1250.150876021559 1101.556856537194 1184.6030548023655 1074.8887587990832 772.2956540880924 1004.467346720227 0.9256374960158673 0.9281243654640999 0.7708098833585729 0.8998005117246709 1.1910778464874014 1.2445908571378994 1.0966577063296108 1.1793345584307096 1.0701082143772969 0.7688608859310176 1.0 9.97221495028581 -6.6439542059036665 7.416893690456154 1.0751631690641603 0.8731784819631151 0.37037825975675087 0.12406942552873336 0.15024117851774477 9.17942011618657 0.013956385949316792 0.0291413465424405 2.270104209956558e-07 6.6439542059036665 -0.20198468710104522 S(ph)PEPEVLSTQEDLFDQSNK ddPTM_A549_PD325901_60min_R1 1 SPEPEVLSTQEDLFDQSNK 19 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(1)PEPEVLSTQEDLFDQSNK 141.08 4.9689e-21 2900100.0 984.43 1395.8 1359.7 1313.2 1342.1 1408.2 1154.2 979.36 1617.1 1463.8 1298.8 True False 1084.3686089009364 1513.428964560526 1451.9774185403187 1394.313381506411 1247.835525993648 1396.7320860872214 1198.1237126024746 959.825896506943 1549.1389106167303 1371.3754181863285 1139.0558337715493 0.95198898662453 1.3286696926430577 1.2747201458357391 1.2240957292582169 1.0954998771762716 1.2262191586012736 1.0518568774941828 0.8426504373616571 1.3600201716954885 1.203958030437842 1.0 10.153622750875 -6.74519238477579 24.154093738613007 1.139418624964399 1.2101295508441243 0.04128621400309096 0.1544859111258284 557.1533311182703 828301.0055380134 0.02528042711976354 0.05248448475245489 1.7980742235962423e-07 6.74519238477579 0.07071092587972538 S(ph)PEPGQTWTR ddPTM_A549_MK2206_60min_R1 2 SPEPGQTWTR 10 0 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(1)PEPGQTWTR;S(1)PEPGQTWTR 152.96 2.0729000000000003e-08 93223000.0 6653.299999999999 4711.0 4815.9 4291.2 11583.1 7099.299999999999 6325.4 6699.1 10529.5 8098.2 8513.3 True False 7776.214382432392 4950.769777692082 5498.867036145575 5342.544192639285 9879.241334039792 7850.54321386606 7474.643302696201 7648.717940133316 8144.585062156344 6268.810995555837 6399.21265487298 1.2151829923187236 0.7736529546212356 0.8593036882370529 0.8348752386859584 1.543821383481729 1.2267983011766137 1.1680567135090103 1.195259222133967 1.272747992826003 0.9796222338043661 1.0 12.643678694651816 S(ph)PEPGQTWTR ddPTM_A549_PD325901_60min_R1 2 SPEPGQTWTR 10 0 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(1)PEPGQTWTR;S(1)PEPGQTWTR 133.49 8.7241e-07 74488000.0 11032.6 9842.5 9357.3 8904.8 9340.3 9179.9 8561.599999999999 8963.9 11815.5 12324.2 15484.7 True False 12152.621430229148 10671.962017256757 9992.34264801598 9454.829271731873 8684.269550285719 9105.141937986142 8887.416373087282 8785.107982456482 11318.935624508054 11546.04790873887 13580.180065600793 0.8948792557627631 0.7858483441091711 0.7358033987580941 0.6962226734887986 0.6394811783301286 0.6704728430700176 0.6544402452806578 0.6469065903411366 0.8334893624260129 0.8502131674958809 1.0 13.729214988589165 -9.480946325090637 1.0327884545643653 0.9658498516809153 0.7140035309656279 0.45388127220594443 0.0836432229868474 0.21023293564301362 0.469702154254896 0.023143155540188323 0.01704470805872029 3.3041037427727313e-10 9.480946325090637 -0.25184632071528745 S(ph)PEPSPR ddPTM_A549_PD325901_60min_R1 1 SPEPSPR 7 0 G5E9Y3;Q8WWN8;Q05CH1 G5E9Y3 ARAP3 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 1 S(0.999)PEPS(0.001)PR 52.683 0.04673 8094600.0 465.52 395.34 393.04 486.24 525.63 522.56 497.75 318.32 453.96 559.09 600.02 True False 512.779247702289 428.65668924585077 419.7140579415216 516.2739404688376 488.7115621250587 518.3044446142158 516.6921486292509 311.97085788279077 434.88163988842456 523.7889619851036 526.2213438401641 0.9744554334497728 0.8145938857547598 0.7975998367504582 0.9810965414311512 0.9287186235332585 0.9849551917294465 0.9818912795490721 0.5928510151377472 0.8264234147456335 0.9953776450090186 1.0 9.039525956005372 -10.875823483838735 1.2412643025854075 0.9970455887437347 0.8710826439172823 0.1462310342834302 0.11263500964586477 0.7078616384612884 2.00594600606893 0.07150317686879261 0.019026578033610828 1.3309952824118124e-11 10.875823483838735 -0.12596294482645243 S(ph)PERPTGDLR ddPTM_A549_MK2206_60min_R1 3 SPERPTGDLR 10 1 Q5T200;Q5T200-2;Q5T9K0 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.997)PERPT(0.003)GDLR;S(0.999)PERPT(0.001)GDLR;S(1)PERPTGDLR 118.61 1.8063e-05 785493000.0 2951.08 2947.45 3535.6000000000004 3134.7 4146.32 3361.7 2947.2 3587.58 4800.08 4104.68 4216.41 True False 3449.1501570211176 3097.462615423167 4037.0012444187623 3902.7016407220303 3536.4018205968914 3717.432862684142 3482.6680908252815 4096.130451502961 3712.869544152657 3177.429937175931 3169.3590300039896 1.088280035290535 0.977315156187675 1.2737595224147518 1.2313851487873615 1.1158097858646325 1.1729289195359676 1.0988556543626733 1.2924160414535946 1.1714890957456414 1.0025465424066933 1.0 11.629975384415967 -10.610328187851763 0.95591659476503 1.0025470194226194 1.1587460484794045 0.32905765058354686 0.08564432409743904 0.5232164785848016 0.873587832450568 0.053520026944783555 0.015599006181412136 2.4528546408421793e-11 10.610328187851763 0.15619902905678518 S(ph)PERPTGDLR ddPTM_A549_PD325901_60min_R1 3 SPERPTGDLR 10 1 Q5T200;Q5T200-2;Q5T9K0 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(1)PERPTGDLR;S(0.905)PERPT(0.095)GDLR;S(1)PERPTGDLR 122.52 9.9618e-06 767468000.0 4961.43 4807.67 4880.55 5090.860000000001 5126.139999999999 4807.6 5666.629999999999 5962.67 6210.75 5899.79 5811.799999999999 True False 5465.110721188277 5212.82922341933 5211.773472131318 5405.310860018071 4766.097610622963 4768.448499554702 5882.276705548913 5843.739869225876 5949.733775964912 5527.276252535539 5096.985444035645 1.072224117803476 1.022727900767157 1.0225207682768636 1.0604917199328519 0.9350816601213021 0.9355428913642694 1.1540697477235677 1.1465090362508417 1.1673044471663403 1.0844206469146207 1.0 12.315428517864651 -7.766084517555824 24.998308147839605 1.0922664833828615 1.0084813300580218 0.4093532437276116 0.05942382569156124 142.2609281997435 765593.4786750611 0.012199702432497846 0.017164825988238656 1.7136237886775447e-08 7.766084517555824 -0.08378515332483971 S(ph)PESCSKPEK ddPTM_A549_MK2206_60min_R1 1 SPESCSKPEK 10 1 Q03111 Q03111 MLLT1 Protein ENL 1 S(0.989)PES(0.008)CS(0.003)KPEK 44.614 0.015281999999999999 35822000.0 11298.0 13644.0 10990.0 10295.0 12154.0 9832.9 8321.4 9119.9 13077.0 16631.0 16975.0 True False 13204.826190419977 14338.421321764132 12548.547255391493 12817.275462160105 10366.16270030644 10873.41095144924 9833.290666053708 10412.673753522397 10115.080379677907 12874.045549268858 12759.639013833503 1.0348902642232918 1.1237325214466471 0.983456290713777 1.004517090825541 0.8124181796262301 0.8521723020267824 0.7706558669405018 0.8160633496161906 0.7927403250759314 1.008966283083034 1.0 13.639299893580201 -6.432454000753146 2.072271778814318 0.8747923555562142 1.064150018343403 0.5034041307609698 0.08093305431121026 0.24666161136599873 2.060109884223458 0.013852299474896137 0.03895693570346627 3.6944177251682914e-07 6.432454000753146 0.1893576627871888 S(ph)PESCSKPEK ddPTM_A549_PD325901_60min_R1 2 SPESCSKPEK 10 1 Q03111 Q03111 MLLT1 Protein ENL 1 S(0.978)PES(0.019)CS(0.003)KPEK;S(0.998)PES(0.002)CSKPEK 85.288 0.00070167 8398800.0 4366.700000000001 4044.5 4286.4 4249.9 4301.5 4308.6 4054.2 4018.7999999999997 3271.5 4523.9 4929.200000000001 True False 4810.004169405363 4385.344209173985 4577.300880217124 4512.406670776802 3999.377479369402 4273.512190111777 4208.484799543367 3938.6418813123883 3134.010231947704 4238.260181946397 4322.939648773271 1.112669747950404 1.014435676986243 1.0588398756656328 1.0438282829271734 0.9251522816202888 0.9885662390231332 0.9735238382838903 0.9111026757984152 0.7249720066846291 0.9804116009690527 1.0 12.077796980016126 -7.331614642268633 0.885741827604627 0.873755804391101 1.0588523039935422 0.34134250315912495 0.07822364895880285 0.49408460738959364 0.7663632272756243 0.01884141608096205 0.04370266926926884 4.6599940023517156e-08 7.331614642268633 0.18509649960244123 S(ph)PESDRPR ddPTM_A549_MK2206_60min_R1 2 SPESDRPR 8 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(1)PESDRPR;S(0.999)PES(0.001)DRPR 81.33800000000001 0.0010432 12561200.0 772.78 722.66 679.56 598.41 1444.18 755.1600000000001 377.5 767.27 1602.92 947.3 1123.15 True False 903.2063713429591 759.4403072695736 775.9318264671381 745.0204768636457 1231.7430350936781 835.0705299653612 446.08686356085263 876.0328721658271 1239.8611793372575 733.3042720715772 844.2408576369425 1.0698444207865787 0.8995540791466451 0.9190882192541551 0.8824738463250668 1.458994816409818 0.9891377826734786 0.528388148388677 1.037657517095147 1.4686107265735386 0.8685960474882958 1.0 9.721510841012794 -8.538963069362506 24.464858945943387 1.2229645242391165 0.9627763559028416 0.01472546598259128 0.25137274503888873 245.49112314473768 373399.3151146784 0.04419505426875687 0.05012028208153926 2.8909257044848334e-09 8.538963069362506 -0.2601881683362749 S(ph)PESDRPR ddPTM_A549_PD325901_60min_R1 3 SPESDRPR 8 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(0.97)PES(0.03)DRPR;S(1)PESDRPR;S(0.989)PES(0.011)DRPR 116.37 0.00035864 16908000.0 1217.0 1506.81 1720.0300000000002 1066.74 1882.0700000000002 1236.8700000000001 1373.92 1313.1100000000001 1265.79 1546.81 1599.24 True False 1340.5489440919525 1633.7941668501546 1836.761579180632 1132.6301070576826 1749.8798959890207 1226.7973408029422 1426.2052774378715 1286.918990935133 1212.5932482032965 1449.1441526197543 1402.5436184176274 0.9557983983445604 1.1648793986838197 1.3095931955776865 0.8075542836489709 1.247647397920689 0.8746946082055082 1.0168705334433303 0.9175607617729964 0.8645672279136417 1.033225729018469 1.0 10.453829923300987 -7.283624891680976 24.7306260349246 0.9359170639390935 1.0965802953346662 0.21621087631065716 0.1366884793896694 712.8369658479969 794611.8873219843 0.019063005038948488 0.03048954312037652 5.2044532088095606e-08 7.283624891680976 0.1606632313955727 S(ph)PFLKPDER ddPTM_A549_MK2206_60min_R1 1 SPFLKPDER 9 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 S(1)PFLKPDER 51.013000000000005 0.007509899999999999 20730000.0 978.26 986.89 1027.0 985.66 1502.9 1382.7 1337.1 1450.7 1931.4 1245.7 1576.8 True False 1143.3663718392859 1037.1184856519935 1172.6440428832632 1227.1467442479584 1281.8254008795916 1529.0163962380227 1580.0337622972604 1656.3411675824216 1493.9409838120298 964.2955048237767 1185.237042533884 0.9646731673142074 0.8750304356289506 0.9893751214325038 1.0353597636675924 1.081492861663532 1.2900511386053062 1.3330951578423096 1.3974767140599804 1.260457554227445 0.813588733914557 1.0 10.21095990571687 -6.619323561804755 1.7787754726174656 1.1756905769270072 0.9334545893812574 0.3017887391307703 0.15573189476346266 0.32784203555847863 2.076669832243992 0.02244325183241428 0.05913534377768989 2.402572148110558e-07 6.619323561804755 -0.24223598754574982 S(ph)PFLKPDER ddPTM_A549_PD325901_60min_R1 2 SPFLKPDER 9 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 S(1)PFLKPDER;S(1)PFLKPDER 118.87 4.4631999999999996e-05 63299000.0 13278.8 11477.4 13584.5 12449.5 15875.7 12100.2 12864.0 12397.6 13548.0 12806.8 14773.7 True False 14626.854000664109 12444.640777938797 14506.42586023458 13218.477340134083 14760.645600191761 12001.659983008522 13353.546559450899 12150.320142270948 12978.6246744391 11998.176462377838 12956.628558200444 1.128908954591166 0.9604844903933283 1.119614241858716 1.020209638700178 1.1392350667372901 0.92629497936888 1.0306343582721016 0.9377686554563478 1.0016976728274527 0.926026119254921 1.0 13.661402743209075 -7.263875741020859 24.9999145905245 0.9933969824038273 1.066981417841881 0.3972576741102489 0.059536215765581144 192.79767914687852 1978326.2379202887 0.007327131863858862 0.012054483245744778 5.4465846652821365e-08 7.263875741020859 0.07358443543805371 S(ph)PFNDRFPLK ddPTM_A549_MK2206_60min_R1 2 SPFNDRFPLK 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(1)PFNDRFPLK;S(1)PFNDRFPLK 60.563 0.0022161999999999998 4310700.0 1761.1399999999999 1919.5900000000001 2127.1000000000004 2032.43 3636.8 2573.3 1903.87 1854.79 3732.7999999999997 2740.1 2421.8999999999996 True False 2058.377376260952 2017.2889317681909 2428.75476496299 2530.375441239251 3101.8315376398273 2845.604897981706 2249.7785349075493 2117.7121625561467 2887.326760056717 2121.1095069179005 1820.4753889604342 1.1306812433407132 1.108111070328803 1.334132161132872 1.3899531169625965 1.7038579903082895 1.5631108858915488 1.2358192527899345 1.163274260887123 1.5860289996589838 1.1651404461606816 1.0 10.830099521756113 -11.033599236430963 1.3175482741633253 0.9993019740538203 1.3831625868215705 0.2098731472523605 0.19313599401440792 0.4369392510396589 1.3475773978579006 0.14935762343117945 0.0332700101517447 9.255518720512789e-12 11.033599236430963 0.3838606127677502 S(ph)PFNDRFPLK ddPTM_A549_PD325901_60min_R1 2 SPFNDRFPLK 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(1)PFNDRFPLK;S(1)PFNDRFPLK 64.878 0.0016274 5341300.0 1673.9099999999999 1601.56 1251.62 1467.6399999999999 1684.26 1378.08 1464.81 1515.9099999999999 1553.91 1747.58 1662.0900000000001 True False 1843.8441109325884 1736.5290818753085 1336.5624598024808 1558.2927895477228 1565.9633879815674 1366.8573733809685 1520.5541461247874 1485.6739858416104 1488.6045665675863 1637.2375005561316 1457.6634668566016 1.2649312772506889 1.1913100117821231 0.9169211482570316 1.06903467431212 1.07429693038717 0.9377043497759787 1.0431448552413864 1.019216039656542 1.021226504206563 1.1231930673866546 1.0 10.50944196541161 -5.616828913419236 5.5917889657386315 1.012019028442694 1.2474237754484723 0.6609209717972173 0.05716115624800978 0.055913225342750936 2.6062299946305068 0.005746682339601423 0.02337443659550784 2.4164125719451145e-06 5.616828913419236 0.2354047470057783 S(ph)PGAFDMSGVR ddPTM_A549_MK2206_60min_R1 3 SPGAFDMSGVR 11 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 S(1)PGAFDMSGVR;S(1)PGAFDMSGVR;S(1)PGAFDMSGVR 130.44 9.365500000000001e-08 26209400.0 8524.8 8940.6 7590.6 7736.299999999999 12152.4 9102.2 8391.400000000001 9639.9 13167.1 11149.2 10761.7 True False 9963.577828650396 9395.638351609816 8667.061218996783 9631.693847295697 10364.798058186941 10065.388762448642 9916.008759959039 11006.385345955598 10184.772873538037 8630.58797654431 8089.272882189809 1.231702524288339 1.1614935592414293 1.0714264860663922 1.1906748588617704 1.2813015717404177 1.2442884433543657 1.2258220119871543 1.3606149163527923 1.2590467674742312 1.0669176454099252 1.0 12.981794314090706 -10.706307101243492 1.0033605543151978 1.0021305564416636 1.2242027730618037 0.5122721770056891 0.07119051378874844 0.3230015106469009 0.5866026963090819 0.04967395392146312 0.013478774779832932 1.9664952365630774e-11 10.706307101243492 0.2220722166201401 S(ph)PGAMER ddPTM_A549_MK2206_60min_R1 3 SPGAMER 7 0 H0YBP1;E7ESA6;Q05397;Q05397-7;Q05397-5;E5RIK4;E5RH08;E5RGA6;E5RJP0;E5RI72;E5RG66;E5RH01;E5RH48;E5RG54;E5RFW9 H0YBP1 PTK2 Focal adhesion kinase 1 1 S(1)PGAMER;S(1)PGAMER;S(1)PGAMER 81.95 0.015183000000000002 74010000.0 4251.9 4954.900000000001 3897.2000000000003 2985.92 6664.5 5180.700000000001 4316.22 5262.799999999999 7438.5 5758.799999999999 4826.2 True False 4969.516771025554 5207.083245910957 4449.881561757208 3717.4705340430437 5684.160878409763 5728.918235329662 5100.4213039433735 6008.818016649047 5753.691626843627 4457.8830803397 3627.7213436561588 1.3698727934866908 1.4353592110972493 1.2266326821211808 1.0247398247783917 1.5668681080893179 1.5792057031469333 1.4059572995766456 1.6563615138623429 1.5860346156148897 1.2288383417693467 1.0 11.824847926976974 -10.889591854968206 1.1663982415784007 1.0024460901703842 1.4369079882419242 0.277305332027762 0.18364678094623188 0.3716517864359198 0.9059841852722724 0.12792611429628498 0.0314045621384057 1.2894608030918001e-11 10.889591854968206 0.43446189807154 S(ph)PGAMER ddPTM_A549_PD325901_60min_R1 2 SPGAMER 7 0 H0YBP1;E7ESA6;Q05397;Q05397-7;Q05397-5;E5RIK4;E5RH08;E5RGA6;E5RJP0;E5RI72;E5RG66;E5RH01;E5RH48;E5RG54;E5RFW9 H0YBP1 PTK2 Focal adhesion kinase 1 1 S(1)PGAMER;S(1)PGAMER 78.264 0.016853 24370000.0 3964.6000000000004 4217.2 4212.6 4536.1 4936.5 3708.5 3989.8 4489.9 4469.200000000001 4735.6 5479.0 True False 4367.083273415736 4572.5982442646855 4498.492368421675 4816.284594769445 4589.777270000479 3678.299205549257 4141.634022302334 4400.345422241589 4281.3750660616515 4436.593407817446 4805.117734242626 0.9088400149479515 0.9516100327113858 0.936187751730649 1.0023239514918105 0.9551851845985853 0.7654961665843601 0.8619214452931883 0.915762248838043 0.8910031559791685 0.9233058695317761 1.0 12.230356064782255 -4.166779060576889 19.17617639973009 0.9311547643744259 0.9234326748840748 0.0 0.06429377716259045 0.0 0.0 0.009470323936899156 0.0 6.811157758392676e-05 4.166779060576889 -0.007722089490351136 S(ph)PGAPCQECSR ddPTM_A549_MK2206_60min_R1 1 SPGAPCQECSR 11 0 Q9NWF9-3;Q9NWF9;Q9NWF9-1 Q9NWF9-3 RNF216 E3 ubiquitin-protein ligase RNF216 1 S(1)PGAPCQECSR 57.802 0.01257 3351500.0 652.6 528.88 543.35 640.84 628.46 661.3 506.34 498.07 1027.6 912.84 1092.8 True False 762.7429254618579 555.7977329708742 620.4052002927178 797.8458287684009 536.0143665159279 731.2783270645867 598.3354238288791 568.6729477754031 794.8502407400032 706.6288100050865 821.4276002543303 0.928557702743002 0.6766241270670577 0.7552767889715759 0.9712917225101421 0.6525400002994387 0.8902529289716689 0.7284092032500766 0.6922983201432855 0.9676449153813456 0.86024478576846 1.0 9.681989612963473 -8.84245037012587 7.4676906355922945 0.9854963278377245 0.7855326933364378 0.27635219781355236 0.1063563831242533 0.13990754331310468 11.05176366790461 0.01594295367474406 0.01694413347660205 1.4373072951494324e-09 8.84245037012587 -0.19996363450128662 S(ph)PGAPCQECSR ddPTM_A549_PD325901_60min_R1 2 SPGAPCQECSR 11 0 Q9NWF9-3;Q9NWF9;Q9NWF9-1 Q9NWF9-3 RNF216 E3 ubiquitin-protein ligase RNF216 1 S(1)PGAPCQECSR;S(1)PGAPCQECSR 85.845 0.00039326 10943700.0 1614.1399999999999 1733.54 1807.41 1568.4 1389.5900000000001 1292.69 1261.71 1661.1 796.87 1606.3899999999999 1490.75 True False 1778.0063045329355 1879.6314996591584 1930.0717114392578 1665.2765059051599 1291.9899922252537 1282.1627612300035 1309.7250644842043 1627.968057392259 763.3803250900706 1504.9622612517676 1307.3972006428535 1.3599587819667054 1.4376897080205882 1.47627034117117 1.27373418352612 0.988215357651046 0.9806987200213967 1.0017805329858487 1.245197753667959 0.5838931923020126 1.1511132657403353 1.0 10.352481797900445 -6.903299481179738 0.7290762536068293 0.8331372910488839 1.4788300526490148 0.4251791533861238 0.18786313208693942 0.40570871850584184 0.3896782483510899 0.03670982705927097 0.13681802389539402 1.2493971726647134e-07 6.903299481179738 0.6456927616001309 S(ph)PGAPGPLTLK ddPTM_A549_MK2206_60min_R1 2 SPGAPGPLTLK 11 0 Q15942;Q15942-2;H0Y2Y8;C9JJK5 Q15942 ZYX Zyxin 1 S(1)PGAPGPLTLK;S(1)PGAPGPLTLK 125.38 3.2319e-06 578130000.0 36090.0 38061.0 34654.0 32505.0 45796.0 32117.0 31491.0 36018.0 44286.0 42402.0 43983.0 True False 42181.109684214636 39998.14232832486 39568.45828829269 40468.72645920489 39059.469065594385 35515.59962246082 37212.50707389352 41123.66180049884 34255.291710209975 32823.35875053205 33060.8072309537 1.2758644817577807 1.2098356234591867 1.1968388434038628 1.2240695206412082 1.181443296067627 1.0742508304276606 1.125577691250464 1.2438795433281546 1.0361299248052818 0.9928178256881961 1.0 15.012834330249731 -8.043324086278083 0.29900036353153864 0.9753089544604306 1.274407221664929 0.6984899725179867 0.053053174126983876 0.6592021739685058 0.15862275977064888 0.041615268269005176 0.07041031809568876 9.050569625384844e-09 8.043324086278083 0.2990982672044983 S(ph)PGAPGPLTLK ddPTM_A549_PD325901_60min_R1 4 SPGAPGPLTLK 11 0 Q15942;Q15942-2;H0Y2Y8;C9JJK5 Q15942 ZYX Zyxin 1 S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK 140.75 3.327e-11 828973000.0 13184.599999999999 14591.5 14143.300000000001 14207.6 16948.7 13852.8 13179.9 15782.7 15531.4 15007.500000000002 16435.1 True False 14523.090886010466 15821.176913873698 15103.149388571954 15085.17118419927 15758.281781840791 13739.987389681204 13681.468306818018 15467.901667211365 14878.66926989839 14059.923888804036 14413.686890682777 1.0075902852724246 1.0976495489228884 1.0478338750604368 1.046586574178363 1.0932859789001785 0.9532597380454364 0.9491997717573513 1.0731398416327504 1.0322597807724119 0.9754564529837666 1.0 13.815151790604286 -7.242584024494571 24.998778895148575 1.0110377832533228 1.059494929797002 0.3308216969793629 0.0409561362160047 908.6930868211895 1204762.4710734822 0.005850430599448143 0.01012304347809035 5.720262719928276e-08 7.242584024494571 0.048457146543679164 S(ph)PGAPSAGEAEAR ddPTM_A549_MK2206_60min_R1 2 SPGAPSAGEAEAR 13 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(1)PGAPSAGEAEAR;S(1)PGAPSAGEAEAR 88.09200000000001 0.00019206 8298200.0 2066.32 1873.44 2023.94 2114.18 2046.1399999999999 1600.17 1974.99 1558.1100000000001 2239.8 2337.4 2195.42 True False 2415.064299326307 1968.7900938907785 2310.965125757695 2632.1541949091466 1745.155516505268 1769.4989272931202 2333.820118315358 1778.9768640117513 1732.4888762256303 1809.3797166051972 1650.2366234904473 1.463465460012733 1.1930350265324694 1.400384098172375 1.5950162282435754 1.0575183532250398 1.0722698200397582 1.4142336226783343 1.078013200463945 1.049842702291511 1.0964365296766614 1.0 10.688457188563811 -7.737683933134795 0.473061579496099 1.0001757950573695 1.4028828711353336 0.40166569000798125 0.15327550248984462 0.6470521666244937 0.30104020944420967 0.045201610186359355 0.09931309404649705 1.8294311384394548e-08 7.737683933134795 0.4027070760779641 S(ph)PGAPSAGEAEAR ddPTM_A549_PD325901_60min_R1 2 SPGAPSAGEAEAR 13 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(1)PGAPSAGEAEAR;S(1)PGAPSAGEAEAR 91.62 0.00018122 12637600.0 2607.8 2228.0 2372.7 2492.8999999999996 2678.7 2532.6 2384.3 2658.3 2532.0 2691.8999999999996 2797.7 True False 2872.5419362391067 2415.76137916668 2533.7256902041713 2646.880771213322 2490.5573530133265 2511.975345280853 2475.0358412390215 2605.278121103993 2425.5888452671834 2521.9329745974724 2453.60063608151 1.1707455133475435 0.9845780701397027 1.0326561107559151 1.0787740809525088 1.0150622380791512 1.02379144688052 1.008736224160646 1.0618183264187269 0.9885833943786947 1.0278498209982092 1.0 11.260684730389896 S(ph)PGASNFSTLPK ddPTM_A549_MK2206_60min_R1 2 SPGASNFSTLPK 12 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 S(1)PGASNFSTLPK;S(0.623)PGAS(0.377)NFSTLPK 183.23 3.6176000000000005e-19 101710000.0 18599.0 18953.8 17188.6 15161.5 19947.3 14123.5 14181.699999999999 15081.3 21436.0 26456.0 24269.8 True False 21738.05649810772 19918.46746177461 19626.20194304114 18876.068180625596 17013.078594028517 15618.03939557945 16758.33131910182 17219.120459544207 16580.780226257986 20479.571225510026 18242.938847595662 1.1915874234798904 1.0918453231782759 1.0758245755797062 1.034705446217805 0.9325843130955167 0.856114221839747 0.9186201553983991 0.9438786482482568 0.9088875627318819 1.1226026352771084 1.0 14.155050538839577 -6.155903522324534 1.2898267368723793 0.9434815363173277 1.1580466131502576 0.5397105330253456 0.06781816632862506 0.21171669386982206 0.6154431087117924 0.007598067496655513 0.038378625235579444 6.983875322793814e-07 6.155903522324534 0.2145650768329299 S(ph)PGASNFSTLPK ddPTM_A549_PD325901_60min_R1 3 SPGASNFSTLPK 12 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 S(0.998)PGAS(0.002)NFSTLPK;S(0.999)PGAS(0.001)NFSTLPK;S(1)PGASNFSTLPK 166.03 1.2627e-14 147217000.0 38738.9 40799.5 40291.6 42089.0 48414.0 43263.0 43237.4 46150.0 48854.0 48259.0 50209.0 True False 42671.6446099291 44237.8170508577 43026.03026907341 44688.74193894558 45013.567659232904 42910.68047180193 44882.82291741315 45229.50204602539 46800.83627436135 45211.918504067544 44033.611301074634 0.9690698389048028 1.0046374972151804 0.9771179105635464 1.0148779675005888 1.0222547351716835 0.9744983253452731 1.0192855319208804 1.0271585888510026 1.0628434709650803 1.0267592679359494 1.0 15.426317547524079 -7.954351090930428 7.0619581840444186 1.0300014365845591 0.9957214712092014 0.40012060736439237 0.020573560731424224 0.2142432617865998 26.18187604268886 0.004151493810901791 0.005735089364669625 1.1108333479212647e-08 7.954351090930428 -0.03427996537535771 S(ph)PGDPAKPASSPR ddPTM_A549_PD325901_60min_R1 1 SPGDPAKPASSPR 13 1 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 S(0.976)PGDPAKPAS(0.01)S(0.013)PR 64.52 0.0016544 37186000.0 7096.1 7223.8 6924.6 6186.2 8290.4 6739.0 6309.1 7124.7 6977.4 8499.1 9368.0 True False 7816.490848127281 7832.574977928307 7394.5449970024965 6568.307524120441 7708.11090432735 6684.119818308328 6549.196252971993 6982.592269280979 6684.164142562105 7962.465375534515 8215.795388644812 0.9513979448576073 0.9533556530331609 0.9000400627336241 0.7994731140941762 0.9382062891903149 0.8135694113739202 0.7971469520801049 0.8498985112180053 0.8135748063785034 0.9691654914555895 1.0 13.00418453697749 -10.911940516102867 1.1737085736588884 0.9997574336263894 0.8633141950997422 0.3675761214370835 0.0580841360129354 0.38755226962512285 0.9510344520447679 0.04245428874026403 0.010150233986929469 1.2247839424346153e-11 10.911940516102867 -0.1364432385266472 S(ph)PGDTAKDALFASQEK ddPTM_A549_MK2206_60min_R1 2 SPGDTAKDALFASQEK 16 1 Q5QNY5;P40855;E9PS71;B7Z8B3 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 S(0.999)PGDT(0.001)AKDALFASQEK;S(0.999)PGDT(0.001)AKDALFASQEK 131.09 1.2003e-10 12545900.0 5973.1 6996.3 7161.7 6931.299999999999 9384.7 6922.299999999999 6235.299999999999 4873.3 9438.7 10373.2 10446.2 True False 6981.213251725754 7352.381786386568 8177.336749675817 8629.468811157882 8004.223061836913 7654.813191349146 7368.173298969491 5564.105198855326 7300.849520506683 8029.886915499718 7852.120239546835 0.8890863917958364 0.936356240363799 1.0414176681211584 1.0989985568096585 1.0193709237314044 0.9748721310705405 0.9383673548273028 0.7086118180962094 0.9297933930935363 1.0226393216774203 1.0 12.938866549629921 -7.56899425358009 4.161288004467581 0.9407951234418803 1.0015656239421316 0.12159874452956498 0.09173523872455124 0.46687726211734265 17.373430377173193 0.015122474126206773 0.023067237464724628 2.697775128146323e-08 7.56899425358009 0.060770500500251234 S(ph)PGDTAKDALFASQEK ddPTM_A549_PD325901_60min_R1 1 SPGDTAKDALFASQEK 16 1 Q5QNY5;P40855;E9PS71;B7Z8B3 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 S(0.98)PGDT(0.02)AKDALFASQEK 160.77 5.3646e-21 11108000.0 5165.0 4819.7 6329.8 6204.7 5969.6 7320.1 6558.8 7587.4 6683.9 6077.6 7332.9 True False 5689.346997727963 5225.873033738624 6759.378292179532 6587.950227103893 5550.315890001999 7260.487532571424 6808.398723113077 7436.063354799847 6402.998926888358 5693.859298790293 6430.999787082997 0.8846753515923477 0.812606625214802 1.0510618124659405 1.0244052939227488 0.8630564568125321 1.1289827045484433 1.0586843334667972 1.1562841861285043 0.9956459553534927 0.8853770000469773 1.0 12.650827326374142 -5.761779912565875 24.999999989964834 1.0166744125672016 0.8486409545368446 0.3722662625836839 0.08488807061001774 5.848825817723045 429568.1200098132 0.010191768288977917 0.0348756553676825 1.7306932004889336e-06 5.761779912565875 -0.16803345803035696 S(ph)PGEPGGAAPER ddPTM_A549_MK2206_60min_R1 2 SPGEPGGAAPER 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 S(1)PGEPGGAAPER;S(1)PGEPGGAAPER 180.61 3.0982e-17 400790000.0 5292.7 5226.3 5229.5 4234.0 9409.0 6996.9 5803.8 6706.1 9865.5 7308.1 7662.0 True False 6185.97836590864 5492.296346667829 5971.121735402167 5271.33019007148 8024.948564026933 7737.307313833674 6858.27533439596 7656.710211569918 7630.980001966231 5657.195134304116 5759.31393955772 1.074082508928778 0.953637256851743 1.0367765671514537 0.9152705071111795 1.3933861998575476 1.34344253413417 1.1908146363215328 1.3294483148383307 1.3249807324363783 0.9822689288472013 1.0 12.491681249984625 -6.740340135455661 24.999908272017116 1.201627599145647 0.9949795808810507 0.40125333193688595 0.13259402644594895 244.85018997640208 290114.76127216924 0.021972231667316443 0.04570251767331527 1.8182762435300889e-07 6.740340135455661 -0.20664801826459644 S(ph)PGEPGGAAPER ddPTM_A549_PD325901_60min_R1 2 SPGEPGGAAPER 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 S(1)PGEPGGAAPER;S(1)PGEPGGAAPER 177.42 3.8882e-16 450760000.0 7590.1 7494.1 7889.599999999999 6853.1 8481.5 7031.8 8110.0 7899.900000000001 7891.7 8920.4 9049.9 True False 8360.641364463701 8125.654107546237 8425.035700018903 7276.400422480649 7885.788699586561 6974.535352185862 8418.63048796228 7742.330297148343 7560.039293126002 8357.16442163501 7936.8196720427695 1.0533994357858265 1.023792204347118 1.0615128033834336 0.9167904429165211 0.9935703500186651 0.878756937965149 1.0607057783631744 0.9754953012754579 0.9525275369120498 1.0529613581965196 1.0 12.954345311864463 -6.2392315640365625 24.833878568171077 0.9737496493135094 1.0439905603840514 0.25398381853723273 0.05084980478587908 641.3850037916867 717227.5962586654 0.005905175318391449 0.015609488577477562 5.764590158516517e-07 6.2392315640365625 0.07024091107054198 S(ph)PGETSKPR ddPTM_A549_MK2206_60min_R1 5 SPGETSKPR 9 1 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 S(0.999)PGET(0.001)SKPR;S(1)PGETSKPR;S(0.998)PGET(0.002)SKPR;S(0.999)PGET(0.001)SKPR;S(0.992)PGET(0.006)S(0.002)KPR 97.734 0.0007098 394996000.0 13192.499999999998 12856.0 12275.599999999999 9278.9 11793.9 9893.599999999999 8724.6 10060.300000000001 11606.3 16751.3 17633.0 True False 15419.071474341952 13510.315487584261 14016.464666813816 11552.230916545655 10059.032933284852 10940.534185159835 10309.746886948376 11486.378333376608 8977.4915814526 12967.16969571688 13254.239453957365 1.1633312894266616 1.0193203114004734 1.0575080309590204 0.8715876121505006 0.7589294706971279 0.8254365875284743 0.7778452262585431 0.8666191955621474 0.6773298168211499 0.9783412877639861 1.0 13.69416626835259 -6.2697072778113 3.1934860120709474 0.832901114842262 1.0817705907784905 0.565637594637697 0.09226235803378048 0.177047717582741 3.717514832516912 0.016795065857891717 0.045963293227243684 5.37393887346459e-07 6.2697072778113 0.24886947593622843 S(ph)PGETSKPR ddPTM_A549_PD325901_60min_R1 4 SPGETSKPR 9 1 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 S(1)PGETSKPR;S(1)PGETSKPR;S(1)PGETSKPR;S(1)PGETSKPR 100.88 0.00027303 914074000.0 25866.6 25437.6 25774.7 23324.300000000003 26996.9 20443.899999999998 21063.9 21711.600000000002 23307.800000000003 27918.5 27997.8 True False 28492.558190015505 27581.31582526497 27523.926137862152 24764.989037671345 25100.73087824893 20277.41165655345 21865.498241108344 21278.54510557929 22328.254221057854 26155.72114539899 24554.24809267716 1.1603922092207284 1.1232808156520409 1.1209435546132909 1.0085826674145657 1.0222561400988186 0.8258209162023089 0.890497569242583 0.8665932275859514 0.909343838865782 1.0652218323557396 1.0 14.58368502413216 -6.460907425134264 1.5493541769910424 0.9361647461157064 1.1442652850342194 0.6407530079769727 0.06483567695229717 0.18751929163498152 0.8683313391754616 0.009341360795599819 0.029791074704498873 3.4601312664475017e-07 6.460907425134264 0.208100538918513 S(ph)PGETSKPRPFAGGGYR ddPTM_A549_MK2206_60min_R1 3 SPGETSKPRPFAGGGYR 17 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 S(1)PGETSKPRPFAGGGYR;S(0.998)PGET(0.002)SKPRPFAGGGYR;S(1)PGETSKPRPFAGGGYR 129.2 1.0796e-12 487517000.0 15014.4 16267.4 14889.3 12177.199999999999 21547.5 16196.9 15388.9 15637.8 24870.7 23718.6 25283.9 True False 17548.46365316353 17095.34117631675 17000.82662872617 15160.614546655273 18377.891293800647 17910.845207367922 18184.863932851935 17854.506038753974 19237.52616034682 18360.55178671688 19005.209829859497 0.9233501660998638 0.8995081522045544 0.8945350659594298 0.7977083485201044 0.9669922857114023 0.9424176511446775 0.956835735866557 0.9394532445888797 1.0122238234971932 0.9660799302447173 1.0 14.21410733312747 -7.820224542146765 0.7865821289314259 1.005812211751657 0.8868294098633989 0.4673120178716348 0.04092949967171604 0.29116293910217317 0.36355604766890987 0.007874296500945906 0.013892666680067138 1.512778898065071e-08 7.820224542146765 -0.11898280188825816 S(ph)PGETSKPRPFAGGGYR ddPTM_A549_PD325901_60min_R1 5 SPGETSKPRPFAGGGYR 17 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 S(1)PGETSKPRPFAGGGYR;S(0.999)PGETSKPRPFAGGGYR;S(1)PGETSKPRPFAGGGYR;S(0.999)PGET(0.001)SKPRPFAGGGYR;S(1)PGETSKPRPFAGGGYR 177.0 6.3374999999999995e-31 651366000.0 29193.199999999997 28768.6 28669.8 29270.300000000003 31218.1 31689.1 29817.2 30816.4 35504.2 35877.0 39364.1 True False 32156.872173102045 31193.03088541049 30615.505033512694 31078.259953325567 29025.448352598374 31431.034476087636 30951.90986259792 30201.74272700187 34012.08194318131 33611.720097192876 34522.56524958937 0.9314740066566907 0.9035548389840908 0.8868259010351746 0.9002303197528241 0.8407674268337757 0.9104489845655805 0.8965703921137808 0.8748406298503878 0.9852130540497963 0.9736159481251955 1.0 15.075252049609725 -8.792762749547046 7.872474701285977 0.9931728156277839 0.8924169531169142 0.7721535029744618 0.022459819075348393 0.058646541007978024 12.147150284690092 0.0037159397326139714 0.0039760465344106264 1.6115257541234205e-09 8.792762749547046 -0.10075586251086976 S(ph)PGEYINIDFGEPGAR ddPTM_A549_MK2206_60min_R1 2 SPGEYINIDFGEPGAR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR 126.88 4.1478e-09 68214000.0 1706.48 2029.96 1843.67 1786.7 2669.5 2004.39 1883.81 1896.6100000000001 2629.5 2566.0 2837.8 True False 1994.4921045696485 2133.2762933398053 2105.130129058021 2224.44158020801 2276.820086265267 2216.4932193935997 2226.0738925683945 2165.4602756245254 2033.9224484486551 1986.3388178356015 2133.095940704372 0.935022221227914 1.0000845497063642 0.9868895668906873 1.0428230337700959 1.0673781909281754 1.0390968249940455 1.043588265342308 1.0151724703528648 0.9535072518946481 0.9311999427366077 1.0 11.058733140197885 -11.831842722271755 22.598101472342375 1.0000005193891954 0.9960345306623964 0.0 0.04484883573007758 834.3878899429127 972796.5326489643 0.2651734383277867 0.006374079374344571 1.4728457901209271e-12 11.831842722271755 -0.003965988726798986 S(ph)PGEYINIDFGEPGAR ddPTM_A549_PD325901_60min_R1 4 SPGEYINIDFGEPGAR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR 190.55 1.7499e-34 113511900.0 7160.0 6808.8 6951.700000000001 7083.6 7390.2 6642.700000000001 6898.6 7897.8 7352.400000000001 8146.300000000001 8840.400000000001 True False 7886.877929086583 7382.601471485682 7423.484165968031 7521.137883977164 6871.137846805939 6588.604053580164 7161.129998058772 7740.272183295755 7043.404196659728 7631.941227743743 7753.086843912845 1.0172564925257843 0.9522144689094975 0.9574875550112542 0.9700830179507417 0.8862454381251581 0.8498039795275932 0.9236488823391893 0.9983471537369465 0.9084645043270335 0.9843745312534172 1.0 12.920555109596775 -4.592701405461188 1.3758040937230285 0.9452217242773479 1.280853915517807 0.18166541714348572 0.04525547399605469 11.006078627614464 4.816134810658544 0.0074138512066047905 8.082348892810218 2.5544569886970125e-05 4.592701405461188 0.33563219124045907 S(ph)PGGGGGGGSGNDNNQAATK ddPTM_A549_MK2206_60min_R1 1 SPGGGGGGGSGNDNNQAATK 20 0 Q9NS37;E9PIM0;J3KN20 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 S(0.999)PGGGGGGGS(0.001)GNDNNQAATK 65.107 0.00028656 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PGGGSEANGLALVSGFK ddPTM_A549_MK2206_60min_R1 1 SPGGGSEANGLALVSGFK 18 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 S(1)PGGGSEANGLALVSGFK 249.06 2.2623999999999995e-86 7519300.0 2087.3 2966.0 2620.9 2034.9 3137.3 2816.7 3077.4 2497.1 3943.3 3534.8 3500.8 True False 2439.585210414553 3116.95673118971 2992.583030177941 2533.450591350131 2675.807325956181 3114.7613244258623 3636.523745489184 2851.0715720480234 3050.1488461561426 2736.2862249747823 2631.4547428352475 0.9270861363118236 1.1844994635291963 1.13723522638037 0.9627566646350443 1.0168547770930485 1.1836651695821598 1.3819442479071595 1.0834583341441588 1.1591112689514755 1.0398378434685085 1.0 11.36164486746594 -5.242010125682954 23.25439641687779 1.101268105538079 0.9270857171680061 0.17982619382620257 0.11192222519152481 2488.842311715971 2978711.338678133 0.016338882078937834 0.7417056732708246 5.727826762607848e-06 5.242010125682954 -0.17418238837007294 S(ph)PGGGSEANGLALVSGFK ddPTM_A549_PD325901_60min_R1 2 SPGGGSEANGLALVSGFK 18 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 S(1)PGGGSEANGLALVSGFK;S(1)PGGGSEANGLALVSGFK 176.48 1.2259e-30 26559000.0 6329.1 5814.3 6152.7 5758.3 6026.8 6077.700000000001 6677.200000000001 5974.7 7191.2 5905.700000000001 6972.4 True False 6971.625572762839 6304.291466287626 6570.2592211907195 6113.9771129518485 5603.498359331281 6028.205226255014 6931.304499904039 5855.529921438525 6888.9788720716315 5532.8130941269355 6114.839001685208 1.1401159655784079 1.030982412545973 1.074477875767457 0.9998590496441325 0.9163770882253801 0.9858322066359689 1.1335219942820767 0.9575934738142379 1.1266002048742536 0.904817460051218 1.0 12.578098799027494 S(ph)PGGPGSHVR ddPTM_A549_MK2206_60min_R1 2 SPGGPGSHVR 10 0 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 S(0.999)PGGPGS(0.001)HVR;S(0.999)PGGPGS(0.001)HVR 49.333 0.0090311 31461000.0 1721.06 1665.62 1055.85 725.03 1479.0 1440.98 1426.5700000000002 1706.31 1961.29 1856.68 2026.1599999999999 True False 2011.5328521228703 1750.3929435617683 1205.5854066974616 902.6623825478334 1261.441059219453 1593.4635471548909 1685.7593031788215 1948.184667855216 1517.0609465365503 1437.254698479737 1523.0085528288018 1.3207626762086755 1.1492994837820365 0.7915815078373883 0.5926837251644114 0.8282560573126664 1.046260406217173 1.1068613502187694 1.2791685668716053 0.9960948306684131 0.9436944367844898 1.0 10.57270832831858 -7.294364262106344 23.618003028387903 1.0335960102802877 0.9211841418399712 0.08056264936046287 0.19574938158493527 785.357315129031 563358.3955921913 0.03114643874011508 0.0497940361574064 5.077334053181899e-08 7.294364262106344 -0.11241186844031648 S(ph)PGGPGSHVR ddPTM_A549_PD325901_60min_R1 3 SPGGPGSHVR 10 0 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 S(1)PGGPGSHVR;S(1)PGGPGSHVR;S(1)PGGPGSHVR 76.24 0.00045717 46322200.0 3865.84 3694.8999999999996 3822.14 3841.3999999999996 4761.7 3665.9 3799.0 3671.6000000000004 4387.76 4683.0 4590.6 True False 4258.297230919008 4006.282190252675 4081.5334047949486 4078.6745535476143 4427.254618973213 3636.046125825272 3943.573023892568 3598.3670576855225 4203.3577060464195 4387.314580794219 4025.985302211025 1.0577031238987384 0.9951060149306731 1.0137973932874065 1.0130872935148703 1.0996698414526787 0.9031444113391067 0.9795299107840266 0.893785443207987 1.0440568930388254 1.089749279110571 1.0 11.975126190039578 -4.33505375061255 13.761399739285883 1.0082151468268088 1.009127480102826 0.0 0.06324308305758393 0.0 0.0 0.007427881026450526 0.0 4.623237981872596e-05 4.33505375061255 0.000912333276017252 S(ph)PGGSGGASR ddPTM_A549_MK2206_60min_R1 2 SPGGSGGASR 10 0 E7ER77;Q7Z2K6 E7ER77 ERMP1 Endoplasmic reticulum metallopeptidase 1 1 S(1)PGGSGGASR;S(1)PGGSGGASR 69.554 0.0035475000000000003 73320000.0 4292.4 3609.0 2423.15 2363.02 2928.8 2239.8 2187.8500000000004 2585.8 2876.9 5097.7 4781.4 True False 5016.852180895618 3792.6826847146517 2766.7891066334746 2941.9600060800003 2497.977399757901 2476.814149341088 2585.3540250108895 2952.345068680379 2225.286743465273 3946.126029493592 3594.0464200732545 1.395878515334636 1.0552681410935556 0.7698256458738453 0.8185648325655284 0.6950320357039202 0.6891436169293009 0.7193435261635253 0.8214543507816473 0.6191591547167375 1.097961898169685 1.0 11.811393327226412 -5.414559625711761 2.150569219239441 0.7896761126438719 1.4626339614414956 0.6359543562608133 0.1340032586123434 0.23351806434424896 1.5175560695896728 0.019821113699182567 0.2646035016176689 3.8498195561657535e-06 5.414559625711761 0.6729578487976237 S(ph)PGGSGGASR ddPTM_A549_PD325901_60min_R1 2 SPGGSGGASR 10 0 E7ER77;Q7Z2K6 E7ER77 ERMP1 Endoplasmic reticulum metallopeptidase 1 1 S(1)PGGSGGASR;S(1)PGGSGGASR 87.667 0.00071991 118535000.0 3760.9 4104.4 3345.9 3583.7 3593.7 2596.5 2052.9700000000003 2783.1000000000004 3129.0 4280.799999999999 3998.0 True False 4142.703799371751 4450.292192393053 3572.9728945311854 3805.057009826778 3341.2909095919604 2575.35496486683 2131.0968967782896 2727.588887200287 2997.4990113906065 4010.5095574341003 3506.2713454101136 1.1815126073441977 1.2692378181793347 1.0190234989109976 1.08521464398578 0.9529470427227142 0.7344996183019605 0.607795771302185 0.7779172284457787 0.8548964743742621 1.1438103792748557 1.0 11.775721933220902 -6.371040189734536 1.3685653684250543 0.8794138346412035 1.2087839702151035 0.4713274287322897 0.14173545717755856 0.3171912661697307 1.1083345506691886 0.021359495569424163 0.08057391676528158 4.255590299581704e-07 6.371040189734536 0.32937013557390005 S(ph)PGHMVILDQTK ddPTM_A549_MK2206_60min_R1 19 SPGHMVILDQTK 12 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK 136.6 2.7172e-08 388638500.0 41884.64 44766.5 41248.799999999996 39527.490000000005 62717.43 46961.36000000001 44724.76 48855.87 66946.0 57687.35 63009.0 True False 48953.74325086846 47044.92363681869 47098.50009355712 49211.72682445643 53491.77912827714 51930.77994477215 52850.66996532943 55781.33918732682 51782.837890794326 44655.737569395416 47362.1263400669 1.0336052671996507 0.9933026084814975 0.9944338173371503 1.039052310935306 1.129420979628289 1.0964621725786055 1.1158846540346181 1.1777625604646371 1.0933385363441261 0.9428575323827477 1.0 15.531446232294329 -6.522758497404012 24.999999611010832 1.0703197679897314 1.0075678110900919 0.2088432221469585 0.0607317446724632 5.772720034000994 1199975.1114225285 0.008824909659596982 0.018518580916564237 3.000830757907695e-07 6.522758497404012 -0.06275195689963953 S(ph)PGHMVILDQTK ddPTM_A549_PD325901_60min_R1 12 SPGHMVILDQTK 12 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK 174.37 7.3063e-16 637656300.0 48368.4 50367.39000000001 52392.8 50292.6 57269.700000000004 47751.200000000004 48485.2 49340.1 53373.0 53753.9 58697.79999999999 True False 53278.72436106584 54612.0267196706 55948.49047150048 53399.05967921819 53247.27384173935 47362.330059059925 50330.33081811944 48355.972998940364 51129.91841960717 50359.869580302024 51478.34271601143 1.034973574323993 1.060873832340459 1.086835502458759 1.037311165470161 1.0343626277070828 0.9200438001732466 0.9776991286563907 0.9393459549718584 0.993231633381704 0.978272938158098 1.0 15.651677988005535 -7.020728663628538 18.213905438964783 0.9852176730145691 1.0549607872061526 0.670095050703684 0.02780010830227206 13.421402520825088 11793.832750359123 0.004389513299322189 0.007698621264243811 9.533916333249963e-08 7.020728663628538 0.06974311419158352 S(ph)PGIISQASAPR ddPTM_A549_PD325901_60min_R1 1 SPGIISQASAPR 12 0 Q08495-2;Q08495;Q08495-3;Q08495-4;E5RGQ0;E5RFK4;E5RGQ7;E5RJC0 Q08495-2 DMTN Dematin 1 S(1)PGIISQASAPR 65.12 0.0060673 9050600.0 3031.9 3587.8 3388.7 3359.3 3967.2 3549.7 3799.8 3713.3 3655.5 4846.0 5043.1 True False 3339.6962560331895 3890.156497385194 3618.6775599084945 3566.796331476156 3688.557558097013 3520.7924200992843 3944.4034683303457 3639.235318472505 3501.8720473436774 4540.022732976464 4422.830670844862 0.7551038021980686 0.8795626120233279 0.8181813479233299 0.8064510258076003 0.8339811836821721 0.7960495624008894 0.8918278274435667 0.822829447770228 0.7917716747394129 1.026497071864887 1.0 12.110754294023073 -10.801973718043252 0.8625434518840581 1.0093580008628715 0.8224696899695911 0.7861509340586735 0.03818721384234351 0.24723175070934864 0.299135750798853 0.03127823150827377 0.006408299971777208 1.5777067440088245e-11 10.801973718043252 -0.1868883108932804 S(ph)PGKAEAESDALPDDT(ph)VIESEALPSDIAAEAR ddPTM_A549_PD325901_60min_R1 1 SPGKAEAESDALPDDTVIESEALPSDIAAEAR 32 1 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 S(0.994)PGKAEAES(0.006)DALPDDT(0.997)VIES(0.003)EALPSDIAAEAR 80.13600000000001 5.5599e-06 6224800.0 1177.2 601.95 723.26 1050.0 1266.1 806.02 768.1 1308.7 979.66 1072.6 993.87 True False 1296.708477391164 652.6784390437086 772.3447729156957 1114.8561152769814 1177.1735038078807 799.4560403550797 797.330465820448 1282.5969518447107 938.4882970594184 1004.8758529489384 871.6302906610175 1.4876817514083642 0.7488019244360329 0.8860921668176232 1.279047007913767 1.3505422154559918 0.9171962573131746 0.9147576379152418 1.4714919451365427 1.0767045467725747 1.1528693572441953 1.0 9.767572523249079 -9.633419488532937 1.8376913178418643 1.0201017481341024 1.1143060241412945 0.0 0.24005254016709268 1.032116053523004 6.99722974724497 0.05382167196163521 0.04192768612990634 2.325843621275054e-10 9.633419488532937 0.09420427600719217 S(ph)PGKAEAESDALPDDTVIESEALPSDIAAEAR ddPTM_A549_MK2206_60min_R1 2 SPGKAEAESDALPDDTVIESEALPSDIAAEAR 32 1 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 S(0.994)PGKAEAES(0.006)DALPDDTVIESEALPSDIAAEAR;S(1)PGKAEAESDALPDDTVIESEALPSDIAAEAR 220.77 2.1184999999999996e-102 623390000.0 2965.2 3747.3 2786.3 2814.3999999999996 4383.1 3730.6 3368.8 3557.8999999999996 5809.799999999999 3790.8999999999996 3955.1 True False 3465.653267820262 3938.0215639875933 3181.439237279101 3503.9281263432176 3738.3517962574583 4125.369615828139 3980.8673535464895 4062.2432206117737 4493.889576344166 2934.533057105605 2972.9395147931004 1.1657328548312063 1.324622160791474 1.0701325141155826 1.1786072703154444 1.2574597557924505 1.3876399419835628 1.3390340885638687 1.3664062791719738 1.5115980510141374 0.9870813188440639 1.0 11.537674396210464 -5.224073316408797 20.257393350427286 1.2590585877900524 1.16573038336243 0.008676234120033044 0.16118272082817453 5549.240737183296 3007724.5528846784 0.026335993610993896 4.8841255984841485 5.969345052237381e-06 5.224073316408797 -0.09332820442762246 S(ph)PGKAEAESDALPDDTVIESEALPSDIAAEAR ddPTM_A549_PD325901_60min_R1 4 SPGKAEAESDALPDDTVIESEALPSDIAAEAR 32 1 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 S(0.991)PGKAEAES(0.009)DALPDDTVIESEALPSDIAAEAR;S(0.534)PGKAEAES(0.466)DALPDDTVIESEALPSDIAAEAR;S(1)PGKAEAESDALPDDTVIESEALPSDIAAEAR;S(0.868)PGKAEAES(0.132)DALPDDTVIESEALPSDIAAEAR 173.71 4.6815999999999995e-63 1134572900.0 4218.1 4515.26 3823.1 4458.21 4975.8099999999995 4238.78 3843.6499999999996 4983.97 4572.37 5272.05 5731.8 True False 4646.318406798903 4895.77680650635 4082.5585561678968 4733.583506370466 4626.326271212616 4204.260781043029 3989.922204075982 4884.5608085011745 4380.209189744988 4939.17186326632 5026.82493687386 0.9243047977892004 0.9739302378711825 0.8121545125275053 0.9416646821431267 0.9203277077100063 0.8363650681771352 0.7937261102546533 0.9716990087860194 0.8713669651820029 0.9825629349125393 1.0 12.295431731582433 -10.818489818266873 0.8718078041157206 1.0057259474562288 0.8920914813709686 0.29277205206715906 0.05812664868471957 0.6531718004356797 0.8051294862471421 0.05078775696013169 0.010272486869398521 1.5188335496143112e-11 10.818489818266873 -0.11363446608526018 S(ph)PGKCDQEKPAPSFACLK ddPTM_A549_MK2206_60min_R1 1 SPGKCDQEKPAPSFACLK 18 2 H3BUE0;H3BTR1;H3BU23;Q01850 H3BUE0 CDR2 Cerebellar degeneration-related protein 2 1 S(1)PGKCDQEKPAPSFACLK 59.434 0.00084356 5089200.0 1735.7 2653.7 2247.6 1876.8 2490.7 2311.9 2367.1 2184.4 3066.1 2442.3 2996.1 True False 2028.6437262092365 2788.7619951308607 2566.3434769079086 2336.616084252753 2124.321329410338 2556.5437234849824 2797.171429761309 2494.0453894444363 2371.6332455555876 1890.5827337489836 2252.085681846632 0.9007844339855753 1.2383019072543338 1.1395407810610458 1.0375342746004268 0.9432684318069411 1.1351893687227324 1.2420359723914793 1.1074380559976769 1.0530830441632801 0.8394808194858606 1.0 11.137046001255959 -9.253881002296344 1.655496855716871 1.0164411716950252 1.0975767777691436 0.16613660730844315 0.11380987499770226 0.5524944633229123 3.128652494824095 0.021520695648361485 0.019233190606618766 5.573384400480435e-10 9.253881002296344 0.0811356060741184 S(ph)PGKCDQEKPAPSFACLK ddPTM_A549_PD325901_60min_R1 2 SPGKCDQEKPAPSFACLK 18 2 H3BUE0;H3BTR1;H3BU23;Q01850 H3BUE0 CDR2 Cerebellar degeneration-related protein 2 1 S(1)PGKCDQEKPAPSFACLK;S(1)PGKCDQEKPAPSFACLK 101.29 1.5637e-09 14328900.0 6658.9 7414.1 8084.599999999999 6555.6 7763.5 6921.9 6803.9 8693.400000000001 6106.700000000001 6471.1 7522.6 True False 7334.906625976913 8038.91222678621 8633.269572649158 6960.524523152169 7218.218542621025 6865.530341348632 7062.826137736943 8520.003317159631 5850.056635621293 6062.513641635164 6597.367889690373 1.111792876889446 1.218502948630244 1.3085930202771114 1.0550456848145906 1.094105810576495 1.0406468846579426 1.0705521134836116 1.2914246195780195 0.8867258478586749 0.9189291461385655 1.0 12.687674840968183 -8.77760829147506 24.984308614627494 0.9465094182884211 1.1453146259772171 0.5267910292220236 0.08994941838698489 148.99760144660286 230231.1533023335 0.016639571672145158 0.017740161972710916 1.668751651543637e-09 8.77760829147506 0.19880520768879606 S(ph)PGKHHQNNDPK ddPTM_A549_MK2206_60min_R1 2 SPGKHHQNNDPK 12 1 Q9NQS3-3 Q9NQS3-3 PVRL3 Nectin-3 1 S(1)PGKHHQNNDPK;S(1)PGKHHQNNDPK 106.36 6.235e-05 23583000.0 1635.78 1722.5700000000002 1060.52 1090.57 5037.0 4247.2 3981.7999999999997 3744.8 4994.8 2188.5 2329.3 True False 1911.859673018693 1810.2414553086521 1210.9176829197254 1357.7596989575475 4296.063972473551 4696.635884936811 4705.241518745966 4275.636867969019 3863.485775056605 1694.116330020739 1750.8705245904207 1.0919480602176066 1.0339093781546869 0.6916089259101521 0.7754769298404671 2.453673136954844 2.682457565521865 2.6873726255952923 2.4420063093867057 2.206608496056775 0.9675851561993951 1.0 10.773856686287493 -6.743403707494144 24.843239189965395 1.8716792112513427 0.89316738910354 0.45752616363510046 0.586971868209372 228.75330071511064 315094.38385660585 0.10314109385977803 0.21435410120680198 1.8054950101576463e-07 6.743403707494144 -0.9785118221478027 S(ph)PGKHHQNNDPK ddPTM_A549_PD325901_60min_R1 2 SPGKHHQNNDPK 12 1 Q9NQS3-3 Q9NQS3-3 PVRL3 Nectin-3 1 S(1)PGKHHQNNDPK;S(1)PGKHHQNNDPK 110.56 3.3878e-05 11360100.0 2507.5 2666.6 2278.3 2079.68 2408.4 1557.25 1474.96 1748.77 2059.92 3090.3 3189.6000000000004 True False 2762.059554076064 2891.3237404335123 2432.919138530858 2208.1371103040315 2239.2422925289484 1544.5682723045916 1531.090409929081 1713.8894104664746 1973.3487259647616 2895.1779306061017 2797.299420540295 0.9874021829034575 1.0336125332893598 0.8697385487825049 0.7893817494437304 0.8005014679824448 0.5521640840315407 0.5473459146655644 0.6126943000386561 0.7054478013596455 1.034990358682054 1.0 11.449818971586243 -5.9392480221244455 2.9603821752122528 0.7880645979460874 1.0121688986374515 0.27558126537036864 0.1534514468072227 0.3310280476764752 5.813202632904651 0.025304253336160386 0.09303108166445105 1.1501433636240472e-06 5.9392480221244455 0.2241043006913641 S(ph)PGKHHQNNDPKR ddPTM_A549_MK2206_60min_R1 1 SPGKHHQNNDPKR 13 2 Q9NQS3-3 Q9NQS3-3 PVRL3 Nectin-3 1 S(1)PGKHHQNNDPKR 70.529 0.00069904 3123600.0 278.65 327.01 199.86 153.71 625.55 478.27 327.32 264.91 609.32 436.06 509.95 True False 325.67930766157934 343.6534122273592 228.20315327229696 191.36895690030408 533.5324236610741 528.8802139500683 386.78980710129326 302.46180375285 471.30999288409754 337.5537431431773 383.31534109598806 0.8496380727428914 0.8965292420720075 0.5953405168178525 0.49924679861008314 1.3918890439802913 1.379752275079511 1.009064249803754 0.7890678283004304 1.2295620403204115 0.8806163149589379 1.0 8.5823879287955 -6.756186929159041 24.999983175173913 1.1157561785788845 0.7152952777710148 0.45272974268392485 0.20397282016724422 90.50788921682896 430783.53659699816 0.02934157393611807 0.0596826052934926 1.753125758518744e-07 6.756186929159041 -0.4004609008078698 S(ph)PGKHHQNNDPKR ddPTM_A549_PD325901_60min_R1 2 SPGKHHQNNDPKR 13 2 Q9NQS3-3 Q9NQS3-3 PVRL3 Nectin-3 1 S(1)PGKHHQNNDPKR;S(1)PGKHHQNNDPKR 53.403 0.0056419 8877300.0 1048.06 847.0999999999999 668.55 653.18 811.31 578.99 393.33 554.51 510.24 1264.1799999999998 1244.69 True False 1154.4582796590066 918.4880898977085 713.9218233177394 693.5254451205889 754.3263844675554 574.2748974035229 408.29838838843466 543.4498630453206 488.7963872073963 1184.359459053692 1091.601020739999 1.057582631130554 0.8414137330826817 0.6540135175338788 0.6353286887277242 0.691027555064208 0.5260849765550976 0.37403628306581116 0.497846605783599 0.4477793423791781 1.0849746716532125 1.0 10.092229933430243 -5.437246774266156 2.2669977670507926 0.6649894764768336 1.0881681967457433 0.25580643637415634 0.20683148452056305 0.532743535341336 4.081281425096666 0.03296475681885343 0.3827945603040723 3.653871128079593e-06 5.437246774266156 0.4231787202689097 S(ph)PGKNSSIQLK ddPTM_A549_PD325901_60min_R1 2 SPGKNSSIQLK 11 1 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 S(0.998)PGKNS(0.001)S(0.001)IQLK;S(0.995)PGKNS(0.004)S(0.002)IQLK 58.751999999999995 0.0030036 9707000.0 5111.8 5332.7 5522.8 5755.700000000001 6613.700000000001 6346.6 6746.200000000001 6870.7 7286.6 6874.0 7045.5 True False 5630.7461728917315 5782.105344112275 5897.6104192943085 6111.216516856877 6149.176528026369 6294.915393808526 7002.930332662289 6733.658498540124 6980.3695418340685 6439.974466875824 6178.948165104295 0.9112790757319275 0.9357750202157066 0.9544683434311934 0.9890383206918723 0.9951817629340116 1.0187681180688903 1.1333531445062845 1.08977423318884 1.129701909664142 1.0422444556576278 1.0 12.59314555545522 -6.839937662980837 1.1260773661705277 1.0692456805494885 0.9302940478616308 0.6971928467327925 0.039049517947259915 0.2947481933732441 0.7311289129531591 0.008630380541006047 0.024684736908030438 1.4456472587002487e-07 6.839937662980837 -0.1389516326878577 S(ph)PGLCSDSLEK ddPTM_A549_MK2206_60min_R1 2 SPGLCSDSLEK 11 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(1)PGLCSDSLEK;S(1)PGLCSDSLEK 158.42 2.8263000000000003e-13 12037700.0 6809.8 7877.0 6029.7 7294.6 10011.900000000001 7933.900000000001 6455.4 7616.1 11214.9 9437.5 11624.3 True False 7959.127756374754 8277.905654612725 6884.802127919392 9081.777327467042 8539.16277268373 8773.460031903418 7628.262619948946 8695.705498328038 8674.743056515232 7305.562195371588 8737.665495640935 0.9108986559791539 0.9473818445833643 0.7879452619643195 1.0393825824526903 0.9772819498461879 1.0040965789180578 0.8730321186768423 0.9951978022809606 0.9927987127503228 0.8361000085224368 1.0 13.093032160755808 -5.860908614696747 0.31546700432002633 1.000886431181754 0.8432897631471662 0.0 0.07933296762750458 5.538476951206068 0.5092632208356269 0.0232200513980854 0.31632895265728783 1.3774992951585405e-06 5.860908614696747 -0.15759666803458783 S(ph)PGLCSDSLEK ddPTM_A549_PD325901_60min_R1 2 SPGLCSDSLEK 11 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(1)PGLCSDSLEK;S(1)PGLCSDSLEK 142.83 2.8108e-11 21017000.0 14345.8 15183.900000000001 16892.699999999997 13050.1 14926.1 13852.7 13642.400000000001 16168.199999999999 12637.7 15320.699999999999 16640.2 True False 15802.175055180218 16463.500540901685 18039.14020605725 13856.175038072517 13877.7422282496 13739.888204048042 14161.568997407727 15845.712567292465 12106.58141778558 14353.348387352973 14593.56089091881 1.0828183178386226 1.1281345700312586 1.2361027127575515 0.9494718349854456 0.9509496915783834 0.9415034690126941 0.9703984588312575 1.0858016549718743 0.8295837807014728 0.9835398292876336 1.0 13.83304432948515 -6.284919497042248 19.320522219553794 0.9388486542607043 1.1469297252787551 0.5683901565562275 0.06937897705590104 23.19462323890351 19085.817331643142 0.01148488531294449 0.02673631611472941 5.188962151652994e-07 6.284919497042248 0.20808107101805084 S(ph)PGLIYR ddPTM_A549_MK2206_60min_R1 2 SPGLIYR 7 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 S(0.999)PGLIY(0.001)R;S(1)PGLIYR 73.665 0.018935 12664500.0 1748.79 1808.45 1241.7199999999998 1881.8200000000002 2296.5 1850.5 1903.33 1494.0900000000001 2500.5 2259.4 2667.8999999999996 True False 2043.9429981894625 1900.4923804855118 1417.8145676037052 2342.865984478109 1958.687892155155 2046.3186817375142 2249.1404238974233 1705.8818329587236 1934.1407424779854 1748.9999707785498 2005.3867997058278 1.0192263150875884 0.947693672245323 0.7070030419127551 1.1682863300096453 0.9767132667086852 1.0204109661226906 1.121549430876553 0.850649776496465 0.9644726607164795 0.8721509341914051 1.0 10.969664815704904 -6.267521881331941 24.997397718407473 0.9954046498072401 0.89694627862682 0.14944789706290684 0.11180534300519784 670.278435737304 2754665.1868353966 0.013928354894382367 0.03315902878700001 5.401049016342465e-07 6.267521881331941 -0.09845837118042011 S(ph)PGLIYR ddPTM_A549_PD325901_60min_R1 2 SPGLIYR 7 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 S(1)PGLIYR;S(1)PGLIYR 95.741 0.011857 18696900.0 3058.3 3573.3 3488.2 3782.6 4478.9 4240.1 4009.8 3890.5 4090.1000000000004 3854.1000000000004 3858.8 True False 3368.776364598536 3874.4345314974385 3724.9302282505987 4016.2426110921024 4164.317515366178 4205.570031400675 4162.395133246753 3812.9009254617918 3918.2073207058866 3610.751468255181 3384.1920629486126 0.9954447921207389 1.1448624839932053 1.1006852326830128 1.186765566606994 1.2305204426659666 1.2427102106422425 1.2299523950836584 1.1266798262447462 1.1577969712782765 1.066946379251646 1.0 11.724595732670943 -10.487514952891534 0.7508627741463402 0.9968343666392432 1.1628347226308628 0.3047332816727176 0.06958889646308812 0.5408923322560875 0.5343859334088276 0.05174572680972306 0.013825096130924735 3.254505779424342e-11 10.487514952891534 0.16600035599161966 S(ph)PGLLDTTPIR ddPTM_A549_MK2206_60min_R1 2 SPGLLDTTPIR 11 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 S(1)PGLLDTTPIR;S(0.999)PGLLDTTPIR 99.5 0.00027317 10811600.0 1425.0500000000002 1729.0 1623.85 1269.7199999999998 2674.3999999999996 1641.9299999999998 1799.79 1950.03 2782.9 2471.7 2387.3 True False 1665.5636008725435 1816.9987148439 1854.136347649451 1580.8014569998963 2280.9993027562577 1815.6779427750755 2126.7885461408914 2226.4527242164136 2152.577593378117 1913.3412533297978 1794.4675238718553 0.9281659203722 1.0125559201670198 1.0332515484308407 0.8809306582428755 1.2711287735286683 1.01181989566323 1.1851919958696158 1.2407316903749142 1.1995634163016675 1.0662445699777576 1.0 10.809340098274149 -6.7458637563015795 24.999987520865492 1.118394285809113 0.9721799963601873 0.4465417587516549 0.09197986324106332 237.3248515462435 380921.2260603931 0.015036717461512175 0.03121413919315768 1.7952967459047154e-07 6.7458637563015795 -0.14621428944892567 S(ph)PGLLDTTPIR ddPTM_A549_PD325901_60min_R1 2 SPGLLDTTPIR 11 0 Q8IY92;Q8IY92-2 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 S(1)PGLLDTTPIR;S(1)PGLLDTTPIR 128.85 1.0835000000000001e-07 18694400.0 2270.7 2153.98 2389.0 2427.3 2917.3999999999996 2314.1 1963.98 2491.0 2643.5 2534.0 2795.3 True False 2501.2197923990097 2335.503453993467 2551.1319062240373 2577.2288082017317 2712.491888483622 2295.254736837409 2038.720333631093 2441.3150508483036 2532.4028880188785 2374.0028075448545 2451.495820866657 1.0202831149492941 0.9526850644060308 1.0406429758147238 1.0512882731697357 1.1064640067486213 0.936267040433292 0.8316230100324465 0.9958471191622287 1.0330031430049997 0.9683894980924719 1.0 11.259446586885282 -4.230064026884143 15.90243062525422 1.0046297535781075 1.0054609895844615 0.0 0.06981093408241278 0.0 0.0 0.009205673519869863 0.0 5.8875685009540845e-05 4.230064026884143 0.0008312360063540414 S(ph)PGLPMSDLK ddPTM_A549_MK2206_60min_R1 4 SPGLPMSDLK 10 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)PGLPMSDLK;S(0.997)PGLPMS(0.003)DLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK 72.652 0.0020312999999999998 10455800.0 6070.4 6583.8 6507.9 5873.27 9705.3 6935.300000000001 6520.4 6414.4 10146.3 7874.5 9278.7 True False 7094.935112969143 6918.887298316525 7430.818078558901 7312.221413661109 8277.66322653317 7669.188842720443 7705.072278575319 7323.6608432761395 7848.179250311686 6095.644980922231 6974.54271090763 1.01726169113184 0.9920202062130805 1.0654201123376437 1.0484158914426571 1.1868395634867306 1.09959737298998 1.1047422889138234 1.0500560605676006 1.1252607626931237 0.873984895294874 1.0 12.767882913742543 -5.822774029981617 5.553256879336381 1.073740372543601 1.0047021416274393 0.05892346286514105 0.07626404948331977 0.24102878710509343 14.462338612926452 0.008083962361833489 0.02660437636371547 1.5039242772029423e-06 5.822774029981617 -0.06903823091616168 S(ph)PGLPMSDLK ddPTM_A549_PD325901_60min_R1 3 SPGLPMSDLK 10 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK 91.961 0.00063004 9304800.0 6494.700000000001 6862.0 6799.2 7156.9 7159.200000000001 7013.6 6985.6 8268.0 7817.5 9134.599999999999 9669.8 True False 7154.037162854558 7440.284822191097 7260.634598911035 7598.965458500792 6656.362489899201 6956.483566951669 7251.440830666992 8103.088253879476 7488.957661088549 8557.839797079407 8480.47590191264 0.8435891152336246 0.87734284116214 0.856158862178184 0.8960541302625438 0.7849043575960121 0.8202940079557024 0.8550747522354898 0.9554992370241805 0.8830822406322186 1.0091225888808102 1.0 13.049929511958155 -10.430434824762367 0.36504438358474334 1.0361532834871379 0.8469534392430992 0.6905729037957924 0.037965671584318086 1.0754118204468532 0.21160128817288135 0.0797942756909569 0.015012861481080206 3.711634263770646e-11 10.430434824762367 -0.18919984424403868 S(ph)PGLQK ddPTM_A549_MK2206_60min_R1 2 SPGLQK 6 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4;Q3KQU3-3 MAP7D1 MAP7 domain-containing protein 1 1 S(1)PGLQK;S(1)PGLQK 73.248 0.047148 158842000.0 14202.0 15447.800000000001 14116.900000000001 10546.4 17267.5 12531.7 11950.8 13628.9 17433.9 19693.0 19453.4 True False 16598.95039443657 16234.027037111404 16118.888694234405 13130.268473445893 14727.473624118933 13857.796176130783 14122.10566633916 15560.838311755755 13485.149486217524 15244.337622617511 14622.583893473267 1.1351584997125883 1.1102023524281093 1.1023283444062857 0.8979444788349983 1.0071731324237765 0.9476981822833758 0.9657736121891908 1.0641647485230892 0.9222138566246536 1.0425200999819026 1.0 13.835910645759197 -6.162219648124805 6.5120365316513755 0.9685390539645522 1.1179642048620626 0.6058564119353962 0.04780116850509887 0.10429071074279622 5.830361263998493 0.006135495323183814 0.016446922876349503 6.883040926542255e-07 6.162219648124805 0.1494251508975104 S(ph)PGLVPPS(ph)PEFAPR ddPTM_A549_MK2206_60min_R1 2 SPGLVPPSPEFAPR 14 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 2 S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR 80.387 0.00059757 4341000.0 2614.81 2661.74 2426.0699999999997 2087.35 3884.3 3326.48 3011.3700000000003 3256.48 4557.6 3721.83 4012.4 True False 3056.1260020332857 2797.2111967892456 2770.1232065411864 2598.750843704701 3312.9246155010956 3678.4859056612836 3558.4969491953507 3718.096012551738 3525.3108769916685 2881.0660180768045 3016.0103433935515 1.0133009022093065 0.9274541126546278 0.918472714329057 0.8616518339856358 1.0984460390720883 1.2196529477157987 1.1798689473960506 1.2327862272409233 1.1688656455418727 0.9552573400113374 1.0 11.558425660993132 -6.814164454643509 8.49555796409599 1.1129800368843463 0.9293496652438445 0.5291974095534567 0.08681402571199096 0.19005616949517845 27.923210617654064 0.013838950647117954 0.02627634014778109 1.5340359781541216e-07 6.814164454643509 -0.18363037164050178 S(ph)PGLVPPS(ph)PEFAPR ddPTM_A549_PD325901_60min_R1 2 SPGLVPPSPEFAPR 14 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 2 S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR 78.69 0.00011835 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PGMLEPLGSSR ddPTM_A549_MK2206_60min_R1 9 SPGMLEPLGSSR 12 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR 172.21 9.722000000000001e-16 188588700.0 25833.7 28613.500000000004 24848.100000000002 22376.199999999997 38493.49999999999 29278.2 24943.200000000004 26889.7 41319.0 36518.5 39955.1 True False 30193.79698667483 30069.804931860013 28371.93421807946 27858.37000450578 32831.157142031116 32376.39969070374 29475.056569989563 30701.39732125254 31960.31247288457 28268.945486800247 30033.145965338404 1.0053491239819443 1.0012206169331683 0.9446873880886082 0.9275874740747254 1.0931641054161267 1.078022253415267 0.9814175512617647 1.0222504614296941 1.064167986589561 0.941258219149794 1.0 14.874267984343678 -6.752108840498561 24.999796944936705 1.0338707155947333 0.9701744245737173 0.24150861927221168 0.04637596500213642 175.25565904557334 469568.2287761937 0.005880090026172381 0.01211453102156906 1.7696653989126018e-07 6.752108840498561 -0.06369629102101604 S(ph)PGMLEPLGSSR ddPTM_A549_PD325901_60min_R1 6 SPGMLEPLGSSR 12 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR 186.51 2.5504e-19 276084000.0 33364.8 32571.8 33267.600000000006 32634.4 37326.7 34529.5 34576.799999999996 36505.200000000004 31542.900000000005 37174.8 39845.899999999994 True False 36751.969934132416 35316.73989674205 35525.33939033018 34650.15276990012 34705.001362124356 34248.30320021923 35892.639045150936 35777.075148224605 30217.261606389515 34827.57678370895 34945.10690397121 1.0517057519705533 1.0106347647981757 1.0166041125000258 0.9915595011661685 0.9931290654652549 0.9800600494464993 1.0271148731575936 1.0238078608985126 0.8647065149757943 0.9966367216850923 1.0 15.092802839740195 -8.725139570223302 24.999989171874933 0.9361113606150671 1.010098369839938 0.27761821034518863 0.03888093083361909 151.57886099647052 104393.53276547676 0.008489520644896342 0.009626069106801957 1.8830438340815073e-09 8.725139570223302 0.07398700922487089 S(ph)PGNKSDNIKPK ddPTM_A549_PD325901_60min_R1 1 SPGNKSDNIKPK 12 2 B4DP61;Q16637-2;Q16637;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-3;A0A0G2JRX5;A0A0G2JRY6;H0YBZ9 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 S(0.901)PGNKS(0.099)DNIKPK 46.746 0.012114 2914100.0 1083.3 966.31 929.92 952.09 1262.5 1208.8 1078.6 1034.0 992.63 1165.8 1287.2 True False 1193.2758185166904 1047.74433496524 993.0299632632293 1010.898436946725 1173.826355388555 1198.9559335763624 1119.6467132325663 1013.3760588426917 950.9132130638092 1092.191189043328 1128.8825602330915 1.057041591882067 0.9281251849164025 0.8796574579539865 0.8954859190472346 1.039812640161775 1.06207321807576 0.9918185936023158 0.8976806751567231 0.8423491039382031 0.9674976189000675 1.0 10.140679692312359 -8.256475962374132 24.47302218388475 0.921383147522758 0.9756614707748514 0.1158596739962875 0.06841455871843352 636.9169089496041 3140433.44205817 0.013438750620899326 0.017063639435026003 5.540182072659096e-09 8.256475962374132 0.054278323252093474 S(ph)PGNLTEREELAGSLAR ddPTM_A549_MK2206_60min_R1 2 SPGNLTEREELAGSLAR 17 1 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 S(1)PGNLTEREELAGSLAR;S(1)PGNLTEREELAGSLAR 117.64 3.5134e-10 66755000.0 1569.23 1260.52 1199.3600000000001 1138.87 1840.15 1531.56 1281.8 1823.53 2184.76 1668.67 2004.65 True False 1834.0776600099794 1324.6750838837675 1369.4472826411602 1417.893201125817 1569.4663726319645 1693.628662632751 1514.6864681120542 2082.020961826412 1689.9153483448124 1291.7162880583542 1506.840079474601 1.217168089031371 0.8791079437876711 0.9088205850740668 0.9409712553041477 1.0415613401915882 1.1239604558589116 1.0052071807382432 1.3817132887468475 1.1214961503639094 0.8572351543162726 1.0 10.557310596892158 -6.95753623641306 5.071297814267102 1.0855415810774776 0.9740403234515532 0.08342228649349515 0.14457236092901687 0.3118530183757743 18.784495573108376 0.018947183395838153 0.03601222055237003 1.1027162222094235e-07 6.95753623641306 -0.11150125762592433 S(ph)PGNLTEREELAGSLAR ddPTM_A549_PD325901_60min_R1 2 SPGNLTEREELAGSLAR 17 1 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 S(1)PGNLTEREELAGSLAR;S(0.975)PGNLT(0.025)EREELAGSLAR 169.51 2.5184999999999997e-30 65544000.0 3217.1 3011.4 2388.48 3216.2 3276.24 2546.58 2517.4700000000003 3041.8900000000003 3649.2 3279.38 3982.5 True False 3543.6976236961523 3265.1812465092175 2550.576615897022 3414.8573694798356 3046.128204814417 2525.8414967959066 2613.273698462442 2981.2171176334587 3495.8368144348337 3072.3193871375065 3492.677747147519 1.0146076678818428 0.9348647321316436 0.7302639408917946 0.977718992904158 0.8721469386353207 0.7231819479649302 0.7482149478567587 0.8535620327607459 1.0009044828970823 0.8796458217900806 1.0 11.770117822888947 -8.759993135170566 9.91393257704929 1.0004609495851369 0.8516237393133351 0.14634447594281252 0.09831867485456884 0.08180259589615083 138.09703561706718 0.01584216613313819 0.017432220301148257 1.7378282981303204e-09 8.759993135170566 -0.14883721027180175 S(ph)PGNTSQPPAFFSK ddPTM_A549_MK2206_60min_R1 4 SPGNTSQPPAFFSK 14 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;H7C184;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(1)PGNTSQPPAFFSK;S(1)PGNTSQPPAFFSK;S(1)PGNTSQPPAFFSK;S(1)PGNTSQPPAFFSK 203.99 1.056e-31 104455500.0 11900.3 13333.999999999998 14441.8 13150.0 22330.3 16831.0 14309.0 14783.900000000001 22167.100000000002 19455.1 19699.399999999998 True False 13908.779705598752 14012.643645881179 16489.864399719096 16371.750590325935 19045.54245076953 18612.04524848641 16908.760081303946 16879.563098794908 17146.287243584786 15060.179397846225 14807.495304218663 0.939306710543824 0.9463209920376587 1.113616047882259 1.105639424762243 1.2862095890952907 1.2569340638712767 1.1419054832647242 1.1399337127586942 1.1579464920512115 1.0170646073786411 1.0 13.854040008172213 -5.758987666443021 7.1823648447993405 1.115209624863492 0.94162241028801 0.4304981083364189 0.082838246213514 0.11209814110525974 32.9970290342259 0.013731653272389444 0.048519464750181956 1.7418563397796556e-06 5.758987666443021 -0.17358721457548199 S(ph)PGNTSQPPAFFSK ddPTM_A549_PD325901_60min_R1 2 SPGNTSQPPAFFSK 14 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;H7C184;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(1)PGNTSQPPAFFSK;S(1)PGNTSQPPAFFSK 223.07 6.790100000000001e-47 133019000.0 14859.2 13683.8 13915.0 15140.5 15171.2 14111.0 15588.2 15252.800000000001 15740.7 16459.1 16935.3 True False 16367.695045235112 14836.981849300271 14859.355577692537 16075.69429842965 14105.6272497987 13996.084694487145 16181.41748119035 14948.570938409877 15079.173118758743 15419.86961707241 14852.365461711826 1.1020261444165025 0.9989642314922015 1.000470639912459 1.082365926146341 0.9497226072279088 0.9423471790111748 1.0894841985207482 1.0064774514838097 1.015270810406033 1.0382096816041568 1.0 13.858405099673782 -5.257723111636504 24.40258260886052 1.0086756133009258 1.1020261950961898 0.2548606960980543 0.04368554671367812 249.70129323304863 1639542.427144808 0.005408041836690626 0.056432382429067306 5.524295334594036e-06 5.257723111636504 0.09335058179526401 S(ph)PGNTTTGER ddPTM_A549_PD325901_60min_R1 1 SPGNTTTGER 10 0 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 S(1)PGNTTTGER 74.92 0.0015809 5657400.0 832.3 768.0 746.11 599.22 809.78 973.85 723.09 630.9 860.53 805.45 874.28 True False 916.7944832931232 832.7220552962343 796.7455113239072 636.2324584726412 752.9038463893424 965.9192884789386 750.6075856400302 618.3162045685249 824.3649166736841 754.593749541043 766.7491025175474 1.195690324622378 1.0860424258236117 1.0391215440720694 0.8297792020670551 0.9819429118563747 1.259759268458789 0.9789481111558943 0.806412687720589 1.075142982191907 0.9841468963751071 1.0 9.582610762588518 S(ph)PGPGPSQSPR ddPTM_A549_PD325901_60min_R1 1 SPGPGPSQSPR 11 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 S(1)PGPGPSQSPR 53.327 0.021032 3687000.0 568.66 497.32 567.61 673.78 606.01 621.27 462.2 505.65 578.53 461.72 571.8 True False 626.3899445746337 539.230901744692 606.13142791621 715.3978603345946 563.4459482210044 616.2105831014123 479.7892739255446 495.56441407524886 554.2163959922683 432.56692040237175 501.4722249388451 1.2491019710035234 1.0752956493461858 1.2087038878177712 1.4265951826580983 1.1235835609633555 1.2288030173088045 0.9567614118290504 0.9882190666405967 1.105178648847113 0.8625939760773861 1.0 8.97002598622001 -7.746908484912354 24.984217825092557 1.039008550386421 1.2168376757687789 0.5307310594212489 0.10459681839237941 162.39543191972191 279219.67131152545 0.014254994725026773 0.021091740393230564 1.7909832125440764e-08 7.746908484912354 0.17782912538235784 S(ph)PGPIVSR ddPTM_A549_MK2206_60min_R1 2 SPGPIVSR 8 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(1)PGPIVSR;S(1)PGPIVSR 60.717 0.011173 34763000.0 3416.1000000000004 3636.5 3324.1 3200.2 4852.9 4280.700000000001 3546.7 4248.4 5829.1 5090.1 4717.0 True False 3992.654164373663 3821.5823172526557 3795.5073641170934 3984.2491436624364 4139.044838597758 4733.680832701314 4191.0894807715895 4850.623710179339 4508.818157159937 3940.2428747720196 3545.6387174228375 1.126074730838832 1.077826203350574 1.0704721114044788 1.1237042071106458 1.1673622634644063 1.335071396146647 1.1820407590251893 1.3680535713760016 1.2716518846108469 1.1112928272725997 1.0 11.791829825090343 -6.60230230234256 3.6139223802597242 1.171679839205467 1.0907511419498377 0.1616701064202286 0.10016975222728512 0.5434328731226975 14.050648833134964 0.019318983009069184 0.0427468785415957 2.498605534726158e-07 6.60230230234256 -0.08092869725562934 S(ph)PGPIVSR ddPTM_A549_PD325901_60min_R1 2 SPGPIVSR 8 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(1)PGPIVSR;S(1)PGPIVSR 72.365 0.0056897 32986000.0 6672.0 5751.9 6916.0 6364.4 7774.6 5651.299999999999 5592.1 6779.0 6194.3 7025.5 8975.3 True False 7349.336528333195 6236.6327992948045 7385.3613492864915 6757.514533398873 7228.538916913952 5605.277686482544 5804.9104256145365 6643.787526977376 5933.975112258494 6581.908731020669 7871.394999114406 0.9336764994210115 0.792316076120748 0.9382531749603981 0.8584900813844492 0.918330094948509 0.712107280490076 0.7374690796571173 0.844041942721062 0.7538657522492662 0.8361807191433266 1.0 12.942403623057768 -10.943324333271391 1.2031278064871909 1.0000022511180913 0.8244159029311466 0.009409883108795758 0.08823175584708058 0.3766430329530111 0.9689147384819792 0.054403881461116264 0.012725090301417526 1.1393985612584634e-11 10.943324333271391 -0.17558634818694463 S(ph)PGPLPGAR ddPTM_A549_MK2206_60min_R1 2 SPGPLPGAR 9 0 Q96A47 Q96A47 ISL2 Insulin gene enhancer protein ISL-2 1 S(1)PGPLPGAR;S(1)PGPLPGAR 72.643 0.0025574 19044100.0 3172.7 3293.0 2605.9 2710.7 4377.3 3653.0 3119.9 3617.3999999999996 4631.4 4457.9 4464.9 True False 3708.1741949323264 3460.599634459783 2975.4558046246293 3374.8216216879487 3733.404968574246 4039.5580353348482 3686.7454453602736 4130.1775278228815 3582.3952948260517 3450.857293853988 3356.1421050288805 1.1048918904166654 1.031124286803703 0.8865702677387151 1.0055657704812555 1.1124096810382584 1.2036314044277 1.0985069553032374 1.2306324936700916 1.0674146632403172 1.0282214476804141 1.0 11.712588088008374 -3.7991976726930035 8.903946636921905 1.055910589708997 1.1031549946403234 0.0 0.09322752273201164 0.0 0.0 0.01298305432336642 0.0 0.00015878238730489502 3.7991976726930035 0.04724440493132631 S(ph)PGPLPGAR ddPTM_A549_PD325901_60min_R1 2 SPGPLPGAR 9 0 Q96A47 Q96A47 ISL2 Insulin gene enhancer protein ISL-2 1 S(1)PGPLPGAR;S(1)PGPLPGAR 70.028 0.0037419000000000003 24412000.0 5469.8 5954.8 5319.1 5100.9 7031.1 5567.9 5116.9 5219.1 6182.6 7534.8 7374.2 True False 6025.0900693460635 6456.631894372418 5680.086112346698 5415.971008015574 6537.259791978195 5522.556868431358 5311.626429575116 5115.000956195255 5922.76682257065 7059.051442102987 6467.220148905265 0.9316352204843309 0.9983627811812408 0.8782886590474567 0.8374496125560777 1.0108299457046914 0.853930551500738 0.8213152339454903 0.7909118351353933 0.9158133921841556 1.0915124705160846 1.0 12.658930006278435 -10.009812031223362 1.079944903248627 0.9885661383847287 0.8932457107128023 0.3468173891153018 0.0729712825920831 0.47095197577662995 1.1072687630804667 0.023680935553154165 0.01298790597018676 9.776602745522288e-11 10.009812031223362 -0.09532042767192639 S(ph)PGPPALK ddPTM_A549_MK2206_60min_R1 1 SPGPPALK 8 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(1)PGPPALK 89.029 0.0026706 100060000.0 7661.4 6648.4 6491.2 5939.5 9761.0 7828.7 7391.0 7915.3 11138.0 9893.5 9749.4 True False 8954.45701675373 6986.775162387618 7411.74976744288 7394.677766634291 8325.169830318517 8657.127837729517 8733.849029346387 9037.318014589613 8615.260783731168 7658.551478665832 7328.35491024851 1.2218918333541895 0.9533893005941617 1.0113797514197551 1.0090501698127408 1.136021649098352 1.1813194016603579 1.1917884895465871 1.2331987363154537 1.1756063795003915 1.0450573931613971 1.0 12.839273659119954 -6.765872332978167 24.992189796544285 1.115273199500221 1.0394215848798227 0.1539319792373638 0.08985726284111605 202.33373924355192 1140728.5113483008 0.015116116046186553 0.029287432709836844 1.7144612236281953e-07 6.765872332978167 -0.07585161462039824 S(ph)PGPPALK ddPTM_A549_PD325901_60min_R1 2 SPGPPALK 8 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(1)PGPPALK;S(1)PGPPALK 99.65299999999999 0.0024043000000000003 299810000.0 22501.0 22560.0 22256.5 20964.7 26499.0 21177.2 21028.9 22771.0 23708.0 22605.0 24462.0 True False 24785.284955639276 24461.210374326878 23766.959929206892 22259.641904711752 24637.801656587195 21004.73990447829 21829.16629695562 22316.814541496067 22711.635206790837 21177.716442206576 21453.329077394235 1.1553118337123716 1.1402058061050349 1.1078448404658359 1.037584508418656 1.1484372223865478 0.9790899971143112 1.0175188297445832 1.0402494858017959 1.0586531873378338 0.987152919987692 1.0 14.388913918685978 -2.00000000000381 0.26232946770729326 1.0168988546035036 2.0593846954987134 0.6057177265389994 0.03960757717056159 23.49763115866494 0.2888128194479394 0.016416846617529283 11.16654752848336 0.009999999999912275 2.00000000000381 1.0424858408952098 S(ph)PGPPALKHPATK ddPTM_A549_MK2206_60min_R1 2 SPGPPALKHPATK 13 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(1)PGPPALKHPATK;S(1)PGPPALKHPATK 97.095 6.9316e-05 37581000.0 6127.1 7181.6 6569.799999999999 5914.0 9707.5 7378.1 6457.4 6633.0 9799.400000000001 8491.9 9145.5 True False 7161.204686787235 7547.112764906277 7501.496429342221 7362.930265489551 8279.539609447495 8158.845644813592 7630.625994060526 7573.248062710561 7579.851546426225 6573.5738921193115 6874.419947040607 1.0417176637383183 1.0978544841670983 1.0912188209525322 1.071062041919514 1.2043982871619272 1.186841320092166 1.1100028879302697 1.1016563027940698 1.102616890562425 0.956236881476697 1.0 12.74702227093837 -10.34201051906952 0.6846769326427223 0.9979480066756244 1.1157767660649887 0.5339921861364563 0.04686447529816829 0.5455460831962812 0.4594519563517887 0.03434433861425487 0.009905228881234957 4.549770399937404e-11 10.34201051906952 0.11782875938936421 S(ph)PGPPALKHPATK ddPTM_A549_PD325901_60min_R1 4 SPGPPALKHPATK 13 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(1)PGPPALKHPATK;S(1)PGPPALKHPATK;S(1)PGPPALKHPATK;S(1)PGPPALKHPATK 100.45 6.4332e-05 95806400.0 9569.5 11042.2 12352.4 12530.3 13530.7 16930.8 14450.2 16323.1 17357.5 13951.7 14304.8 True False 10540.988595306442 11972.764946604266 13190.708145015391 13304.268172623964 12580.350310380923 16792.921178188855 15000.110268452858 15997.52296527577 16628.024637332208 13070.787280987986 12545.400285598442 0.8402273626459752 0.9543549567205492 1.0514378054686493 1.060489730877433 1.002785883589749 1.338571970275542 1.1956661347563626 1.2751703892334316 1.3254279862572769 1.0418788546741442 1.0 13.614870883045418 -5.86432241907747 0.8250000580934789 1.1764963096258003 0.8078583427224839 0.4831526040894518 0.11116268352019262 1.0058245086350024 0.8164779336128923 0.022289757902988695 0.27820541121261383 1.3667138041457499e-06 5.86432241907747 -0.3686379669033164 S(ph)PGPPPPVGVK ddPTM_A549_PD325901_60min_R1 1 SPGPPPPVGVK 11 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 S(1)PGPPPPVGVK 83.005 0.000646 3646700.0 4880.5 4955.7 4987.7 4779.5 4735.3 4763.9 5493.6 4383.6 5203.5 5570.7 6782.9 True False 5375.964767165798 5373.334231030661 5326.19531547661 5074.718859967934 4402.70886389816 4725.104377866013 5702.66195421327 4296.165659132325 4984.814990658681 5218.965051298391 5948.646300345735 0.9037290999892441 0.9032868924680163 0.8953625827723278 0.8530880142719179 0.7401194560251927 0.7943159063922477 0.9586486851440188 0.7222089601936214 0.8379746817975989 0.8773365884932619 1.0 12.53834568451544 -10.570983658948574 0.905786541240178 0.9984029999694414 0.8448783720928218 0.1131866771489537 0.07661622645269608 0.4509366865152216 0.6721529470894503 0.04387542212351637 0.012728209405386557 2.6854454881056865e-11 10.570983658948574 -0.15352462787661958 S(ph)PGPQR ddPTM_A549_MK2206_60min_R1 1 SPGPQR 6 0 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(1)PGPQR 68.214 0.053703 22431000.0 575.49 319.07 269.09 237.55 241.74 254.66 181.29 214.65 383.9 669.34 640.82 True False 672.6186426203567 335.3093001418413 307.25100827600505 295.74976066402456 206.1803662310416 281.60795217037315 214.22804634423028 245.07729483805537 296.94726296232693 518.1356291231809 481.686708267734 1.3963819866220966 0.6961149111788811 0.6378648258345276 0.6139877966066674 0.4280383134766534 0.584628862156288 0.44474560469946944 0.5087898225786937 0.6164738571056354 1.0756693515304303 1.0 8.911951304314533 -5.261041230443999 24.900344604053338 0.7040171040938947 1.3963822072654615 0.5172690340540556 0.20038421796424843 22.410862163863033 1401043.1369562722 0.031151688654605783 0.2533981706764236 5.482249158375256e-06 5.261041230443999 0.6923651031715667 S(ph)PGPQR ddPTM_A549_PD325901_60min_R1 1 SPGPQR 6 0 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(1)PGPQR 91.906 0.03694 24637000.0 782.97 706.82 814.73 443.62 825.88 651.96 545.43 668.42 710.31 972.93 1278.2 True False 862.4565380079504 766.3862019850061 870.0224771694883 471.0213998658805 767.8730379313268 646.6506539166488 566.1866371207485 655.0878387346544 680.458140869563 911.4990337587269 1120.9895031773906 0.769370752860182 0.6836693829984326 0.776120092742574 0.4201835954135102 0.6849957432739806 0.5768570107781997 0.5050775547102982 0.5843835619136839 0.6070156223058621 0.8131200436535105 1.0 10.130557053630739 -10.585500891088936 0.8169059110885956 1.0067520895334097 0.6191042026069972 0.45324345885522077 0.11374139880664878 0.3152387008379792 0.3665037202871579 0.07506443107112563 0.0193701540249509 2.597162412517669e-11 10.585500891088936 -0.3876478869264125 S(ph)PGREEVAR ddPTM_A549_MK2206_60min_R1 1 SPGREEVAR 9 1 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 S(1)PGREEVAR 65.695 0.0015907 15682000.0 813.38 1088.2 784.82 883.63 1107.6 692.41 725.45 797.21 1325.5 899.45 1170.8 True False 950.6586587682599 1143.5847319219963 896.1192772498952 1100.119389667658 944.673507228848 765.6803666154399 857.2548746231007 910.2169588532321 1025.27636638855 696.2636203048454 880.0580475638448 1.080222675538108 1.2994423891556242 1.0182501935304276 1.2500532126408952 1.0734218155766773 0.870033935528432 0.9740890126465326 1.034269229595562 1.1650099322728713 0.7911564722716024 1.0 9.781454875082133 -6.973960871269741 22.938116508230024 1.0511433898937872 1.1615672472930534 0.2198129745438948 0.1265605209159118 117.66028287251771 103646.29315360489 0.015698752465987495 0.02966663243729653 1.0617912173378883e-07 6.973960871269741 0.11042385739926619 S(ph)PGREEVAR ddPTM_A549_PD325901_60min_R1 2 SPGREEVAR 9 1 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 S(1)PGREEVAR;S(1)PGREEVAR 103.43 0.00018161 48717000.0 2089.0299999999997 2465.64 2383.48 2471.7 2352.3 2439.8 2707.0 2261.29 2146.85 2315.64 2877.6 True False 2301.1067877373944 2673.428135964331 2545.2372858295785 2624.3712953620156 2187.0825629944557 2419.9310777131104 2810.0163663272383 2216.1867970023122 2056.6253603719806 2169.430095210404 2523.673442609341 0.9118084570237326 1.0593399648411532 1.0085446250121577 1.0399013006407671 0.8666266110615054 0.9588923181800548 1.1134627479464358 0.8781590991863416 0.8149332340897252 0.8596318598841106 1.0 11.301309525724292 S(ph)PGRLFEDSSR ddPTM_A549_PD325901_60min_R1 2 SPGRLFEDSSR 11 1 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 S(1)PGRLFEDSSR;S(1)PGRLFEDSSR 86.463 9.4323e-05 10601200.0 642.36 973.0 780.37 971.9200000000001 860.81 1377.98 1044.9099999999999 1041.1599999999999 1182.9 1077.3 1261.38 True False 707.5719143195613 1054.9981247437975 833.3306009460242 1031.9532910095277 800.3496752332845 1366.7581877478126 1084.674621846691 1020.3932470257805 1133.1868266455572 1009.2790941468315 1106.2382565466253 0.6396198198102534 0.953680745083988 0.7533011953025883 0.9328490358225405 0.7234876126339712 1.2355007428638922 0.9805072419324476 0.9223991676179871 1.0243605479556077 0.9123523690977079 1.0 10.111446424773543 -7.235049008797365 24.998845961478402 1.0157628889647277 0.8138136773300951 0.45576109232977846 0.11487420765737998 493.49880841975806 467477.6199029992 0.014574667750893385 0.02523872858862775 5.820375329182296e-08 7.235049008797365 -0.20194921163463253 S(ph)PGRPPK ddPTM_A549_MK2206_60min_R1 2 SPGRPPK 7 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(1)PGRPPK;S(1)PGRPPK 57.598 0.009699 34431000.0 4071.7 3574.5 2705.3 2025.4099999999999 3615.9 2678.1 2381.0 2864.5 3486.1000000000004 4422.2 4970.5 True False 4758.903416492568 3756.4267820760665 3088.952219291228 2521.6355409241087 3084.0058999537664 2961.4947644210956 2813.5968798367935 3270.551647163334 2696.503916157771 3423.2219486487147 3736.1876711787613 1.2737324340538658 1.0054170487883762 0.8267658081310109 0.6749220764192867 0.825441913355698 0.7926515006904749 0.7530662609753509 0.8753713504256279 0.7217260355947346 0.916233939492845 1.0 11.867351209056228 -5.394469565387357 2.4105299935691344 0.836150547959791 1.3129146234444908 0.7034344025186119 0.08736883454448634 0.22928767292762872 1.9439612835176625 0.015964505397588237 0.1986123147001998 4.032092016629178e-06 5.394469565387357 0.4767640754846998 S(ph)PGRPPK ddPTM_A549_PD325901_60min_R1 1 SPGRPPK 7 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(1)PGRPPK 56.563 0.010401 6223500.0 2003.7 2086.1 1538.1 1619.4 1612.6 1285.7 1451.8 1355.9 1091.6 1858.3 2568.8 True False 2207.1141489540228 2261.902968168587 1642.4847153466671 1719.4266600757562 1499.3365391679883 1275.2296854724766 1507.0490434554436 1328.8555108170267 1045.7238481412544 1740.9666208605377 2252.8538849648567 0.9796969806536977 1.0040167199764363 0.7290684612563273 0.7632215615717033 0.6655276443689011 0.5660507740795491 0.6689510817870697 0.5898542820222697 0.46417739522311147 0.7727827501283758 1.0 11.137538031314682 -5.779783919692918 6.203694370736084 0.7088329232430909 0.9936484509269907 0.4330762375704297 0.13151597095724488 0.15985117472044347 21.819864143149907 0.027323455459522136 0.09280502357913972 1.660412829223011e-06 5.779783919692918 0.28481552768389984 S(ph)PGSISYLPSFFTK ddPTM_A549_PD325901_60min_R1 1 SPGSISYLPSFFTK 14 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.937)PGS(0.049)IS(0.012)Y(0.001)LPSFFTK 60.55 0.006599600000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PGSNSKVPEIEVTVEGPNNNNPQTSAVR ddPTM_A549_MK2206_60min_R1 1 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR 29 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 S(0.628)PGS(0.299)NS(0.073)KVPEIEVTVEGPNNNNPQTSAVR 115.69 5.997e-21 8279800.0 1383.4 2190.9 2168.7 1872.9 2722.7 2138.0 1737.0 1997.0 3737.1 3217.2 3754.1 True False 1616.884099117277 2302.407451909487 2476.2542704975017 2331.760584077677 2322.1944367388796 2364.2417409104587 2052.590415907815 2280.0808655560045 2890.6528169224066 2490.4322855575606 2821.8533621108922 0.5729865771294947 0.8159203035933685 0.8775276220041198 0.8263223792512732 0.8229323564147777 0.8378329549845509 0.7273908855321849 0.808008274338673 1.0243809461311089 0.8825519848042666 1.0 11.462427304754588 -8.74323007148082 7.149887487646088 1.0116350758320996 0.7920477720057347 0.45241719903921107 0.08603719857504094 0.07133647879958689 15.761831218690872 0.012681170975697246 0.014143345887849254 1.8062170125024456e-09 8.74323007148082 -0.21958730382636482 S(ph)PGSNSKVPEIEVTVEGPNNNNPQTSAVR ddPTM_A549_PD325901_60min_R1 1 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR 29 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 S(0.919)PGS(0.061)NS(0.019)KVPEIEVTVEGPNNNNPQTSAVR 124.45 1.3984000000000001e-21 12648000.0 991.4 1024.4 1023.1 1517.9 1166.7 1779.0 1416.2 1539.8 1645.5 1239.9 1547.5 True False 1092.0461981698936 1110.729783132113 1092.5337184000882 1611.6572355989802 1084.7550168964972 1764.51241382557 1470.094265974376 1509.087481050269 1576.345357380391 1161.6125023973427 1357.1673104107435 0.8046511213413977 0.8184177253694338 0.8050103403016946 1.187515513552427 0.7992787687821619 1.3001436155219097 1.083207836423245 1.11193916142406 1.1614967036770978 0.855909579818706 1.0 10.406382870577902 -6.2477657873121375 24.230745935830896 1.082995797885455 0.8102654753302735 0.40044624810395957 0.13623346217278 316.70798571915344 561230.893892793 0.01590731810665749 0.04181399071816403 5.65241724464367e-07 6.2477657873121375 -0.2727303225551815 S(ph)PGSQAPDEGAGGALR ddPTM_A549_MK2206_60min_R1 2 SPGSQAPDEGAGGALR 16 0 P10075 P10075 GLI4 Zinc finger protein GLI4 1 S(0.999)PGS(0.001)QAPDEGAGGALR;S(0.991)PGS(0.009)QAPDEGAGGALR 87.088 1.3668e-05 35094000.0 2317.4 2632.7 2162.3 2345.6 3720.6000000000004 2280.2 2422.3 2558.3999999999996 3298.5 2968.5 3559.2 True False 2708.520465009671 2766.693184829112 2468.9466542614214 2920.2721052979846 3173.304668649018 2521.48925052574 2862.4005552409344 2921.061034771398 2551.39501662213 2297.913788287211 2675.352411077245 1.0123976392026315 1.0341415857491043 0.9228491334595007 1.0915467036068423 1.1861258559844345 0.9424886381642891 1.0699153290569199 1.0918415916635138 0.9536668911572651 0.8589200356456754 1.0 11.38551322784917 -8.774862519910908 24.99695418754951 0.9781204752531127 1.043366226326929 0.22820552573300334 0.07791991102709067 316.9859393401627 590298.2727754881 0.012007004622556243 0.012815248442559709 1.6793355437826102e-09 8.774862519910908 0.06524575107381625 S(ph)PGSQAPDEGAGGALR ddPTM_A549_PD325901_60min_R1 2 SPGSQAPDEGAGGALR 16 0 P10075 P10075 GLI4 Zinc finger protein GLI4 1 S(1)PGSQAPDEGAGGALR;S(0.999)PGS(0.001)QAPDEGAGGALR 186.96 3.4125999999999996e-34 49430000.0 3143.0 3466.5 2777.8 2938.3 3912.8 2934.3 3077.3 3322.5 3413.6 3459.1000000000004 3684.8 True False 3462.0750462456917 3758.6341206828097 2966.318212268366 3119.7921176365294 3637.9784264272007 2910.4040336640646 3194.4083354631753 3256.2301310491744 3270.1382631137667 3240.6918356663023 3231.592959871733 1.0713215090006591 1.1630902057764094 0.9179120789971346 0.9654037981814265 1.1257539150511078 0.9006097209035828 0.988493407161639 1.0076238472738903 1.0119276479806305 1.0028156008221192 1.0 11.658029777381758 -5.750907827357686 24.999150140956445 0.99866620912733 1.117205866417089 0.40156342998781247 0.05876249937998932 148.6424205628844 352830.8130775405 0.0072893221546354355 0.027643387416586344 1.7745660665804501e-06 5.750907827357686 0.11853965728975902 S(ph)PGSTPTTPTSSQAPQK ddPTM_A549_MK2206_60min_R1 2 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(0.858)PGS(0.14)T(0.002)PTTPTSSQAPQK;S(0.955)PGS(0.037)T(0.007)PTTPTSSQAPQK 218.78 1.3874999999999999e-55 61356000.0 4405.0 4017.9 4595.0 3818.0 8191.5 6320.799999999999 5449.9 6113.299999999999 9422.7 8105.0 8328.3 True False 5148.456308089926 4222.393948161545 5246.640094497172 4753.410171396533 6986.541201214432 6989.66286059253 6440.076285351759 6979.8789961960565 7288.4734949599315 6274.074870833033 6260.153260613233 0.8224169750734813 0.6744873124316971 0.838100902019006 0.7593121084276613 1.1160335714416747 1.1165322268656144 1.028740993590451 1.11496934749363 1.1642643864354794 1.002223844950792 1.0 12.611982262206574 -6.759138515191781 24.999683268449928 1.0835736609978968 0.771109954615541 0.8457505518240531 0.06240696052611301 18.57241913448199 201791.14612640522 0.010124909079488924 0.020311284024193722 1.7412514248374914e-07 6.759138515191781 -0.31246370638235577 S(ph)PGSTPTTPTSSQAPQK ddPTM_A549_PD325901_60min_R1 2 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(0.92)PGS(0.079)T(0.002)PTTPTSSQAPQK;S(0.601)PGS(0.396)T(0.002)PTTPTSSQAPQK 263.45 9.446399999999998e-100 108331000.0 15538.599999999999 16050.8 15156.7 15277.2 18923.5 16104.7 16088.2 15044.4 14571.400000000001 14024.5 15227.1 True False 17116.067233087266 17403.457246287504 16185.324806641205 16220.837946961421 17594.378642530944 15973.54866269627 16700.445254800834 14744.327639896523 13959.01473140847 13138.990676563859 13354.26323253985 1.2816931144041825 1.3032135838000505 1.2119968376243333 1.2146561487148682 1.3175102464402049 1.1961385203021986 1.250570320802683 1.1040914338104069 1.0452852761951736 0.9838798627653644 1.0 13.70501276285441 -8.440754402329787 1.3931020967693095 1.0164000056658857 1.259259218865309 0.8901357617887937 0.03821421399044408 0.08329464482063505 0.31325480278927775 0.006877823390851442 0.008340328822363925 3.6244790821980157e-09 8.440754402329787 0.24285921319942316 S(ph)PGSTSR ddPTM_A549_MK2206_60min_R1 2 SPGSTSR 7 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.997)PGS(0.002)T(0.001)SR;S(0.999)PGSTSR 73.57300000000001 0.018977 28789000.0 4079.0 2888.3999999999996 2561.9 1990.6 1301.6100000000001 1068.08 1129.02 1008.46 1030.3 4290.4 4938.4 True False 4767.435478024703 3035.4072226461085 2925.2159430015895 2478.2970893614283 1110.1448932323408 1181.1035166658762 1334.148319728407 1151.4122932792243 796.9386950510171 3321.1956601877887 3712.058987093689 1.284310269475892 0.8177152446121668 0.7880305655627124 0.6676340807024137 0.29906445374175344 0.3181801584437123 0.35940924547994907 0.31018157235176597 0.21468912477464977 0.8947044407793956 1.0 11.858003920696373 -5.206855717858094 1.0590092170844247 0.5379701828812633 1.6912472386504347 0.46456358950137344 0.24680614151625294 1.8366856150043678 1.4909071978806845 0.04856111677516944 2.440680920416481 6.210753347928263e-06 5.206855717858094 1.1532770557691714 S(ph)PGSTSR ddPTM_A549_PD325901_60min_R1 1 SPGSTSR 7 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.999)PGS(0.001)TSR 62.104 0.027531 22582000.0 2339.0 1698.1 1696.9 1770.9 1589.7 1635.2 823.78 1277.9 1538.3 2236.0 2610.5 True False 2576.4535581192085 1841.2048464824688 1812.0618382886432 1880.284470994291 1478.0449561672756 1621.8834733488327 855.1293986897125 1252.4112820068428 1473.6506005823494 2094.8185784018533 2289.4250493229374 1.1253714372004253 0.8042214996411335 0.7914920992170208 0.8212911235291832 0.6455965687124743 0.70842392234176 0.3735127292953329 0.5470418358431189 0.6436771542349286 0.914997666781607 1.0 11.160769619824203 -4.7751308788192715 1.452771366801936 0.7539609711283408 1.9225111904705718 0.3134044364848495 0.1668117607926133 5.236052784901265 3.7498129189655387 0.02950125607594307 12.571583347576295 1.6782981706093888e-05 4.7751308788192715 1.168550219342231 S(ph)PGTKDVVVSVEYSK ddPTM_A549_MK2206_60min_R1 2 SPGTKDVVVSVEYSK 15 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 S(0.986)PGT(0.014)KDVVVSVEYSK;S(0.999)PGT(0.001)KDVVVSVEYSK 136.58 2.9413e-10 10661700.0 3953.4 4974.6 3973.5 3797.1000000000004 5807.6 4804.2 4335.6 4484.5 7502.6 5771.799999999999 5941.3 True False 4620.637268649877 5227.785891765452 4537.002049071709 4727.389670458298 4953.309733281198 5312.577255230133 5123.322399084586 5120.191608205264 5803.273079190296 4467.946371310806 4465.911238461796 1.0346460155444948 1.1705978047082886 1.0159185453570276 1.0585498497472519 1.1091375239663916 1.189584156862902 1.1472064995293603 1.146505457633955 1.2994600137169612 1.000455703828478 1.0 12.124738862042008 -7.003302570112129 5.757925045563691 1.1487250441604435 1.0740986793033567 0.0752639546171362 0.08686891578823076 0.3271863981238146 40.36085668225899 0.016126628319673625 0.029652064259984304 9.924243919592293e-08 7.003302570112129 -0.07462636485708685 S(ph)PGTKDVVVSVEYSK ddPTM_A549_PD325901_60min_R1 2 SPGTKDVVVSVEYSK 15 1 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 S(0.989)PGT(0.011)KDVVVSVEYSK;S(0.985)PGT(0.015)KDVVVSVEYSK 136.58 2.9413e-10 13709900.0 6095.700000000001 7315.2 7921.799999999999 7735.6 8163.0 9506.400000000001 8359.4 8667.4 8499.1 8624.4 7678.3 True False 6714.530976582837 7931.677576696633 8459.420985653229 8213.410443177736 7589.65904082121 9428.983030236874 8677.521541439202 8494.521907556238 8141.912383416392 8079.85391215069 6733.917776753995 0.9971210221428478 1.177869679976996 1.2562406114989708 1.2197075633342398 1.1270792564502792 1.4002224771419771 1.2886289718883528 1.2614531672602218 1.2090899611995418 1.1998741564744035 1.0 12.7172303901767 -10.407131259058936 0.8345423289942695 1.004294480577219 1.2208396955357557 0.04100795992278239 0.11125013930376278 0.46036850125846407 0.5961821205281744 0.05796699409688208 0.01869447778607497 3.9162349683208524e-11 10.407131259058936 0.21654521495853674 S(ph)PGTPRPPGASK ddPTM_A549_MK2206_60min_R1 2 SPGTPRPPGASK 12 1 A0A2R8Y4Z8;Q9Y3X0;M0QYB4 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(0.998)PGT(0.002)PRPPGASK;S(0.989)PGT(0.011)PRPPGASK 96.48899999999999 7.147e-05 292920000.0 21278.0 22770.3 20269.4 18974.5 28714.0 20892.2 20958.2 20275.4 31511.0 33021.0 33014.0 True False 24869.206202846184 23929.211010185114 23143.905708683575 23623.253351797663 24490.208637205793 23102.998736880025 24766.03365266504 23149.50004080833 24373.808812726962 25561.5331659195 24815.71265995285 1.0021556319428078 0.9642765991887731 0.9326311126269927 0.9519474083015332 0.9868831483017472 0.9309826823616969 0.9979980825870868 0.9328565477052196 0.9821925788196676 1.0300543658038983 1.0 14.598966266230278 S(ph)PGTPRPPGASK ddPTM_A549_PD325901_60min_R1 2 SPGTPRPPGASK 12 1 A0A2R8Y4Z8;Q9Y3X0;M0QYB4 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(0.999)PGT(0.001)PRPPGASK;S(0.999)PGT(0.001)PRPPGASK 102.63 5.7934e-05 498780000.0 27190.0 25327.0 26348.0 27938.0 31183.0 29043.0 27871.0 28928.0 27555.0 28176.0 30719.0 True False 29950.308783779918 27461.39517511422 28136.133723395084 29663.666808198388 28992.813655509974 28806.48343717596 28931.646156596405 28351.008346423016 26396.95917509369 26396.962551453755 26940.757743785205 1.1117099626007723 1.0193252705169036 1.0443705403900763 1.101070247923569 1.076169198032232 1.069252903393972 1.0738987533960682 1.0523463599669216 0.9798150232497836 0.9798151485751401 1.0 14.717502808591213 -8.66843836074803 4.560414084627537 0.990483454842781 1.0687033417056022 0.6987145025926966 0.024103023328403222 0.08688626563999127 3.2092905393348246 0.004072643246001979 0.004597112098513348 2.145663627434731e-09 8.66843836074803 0.07821988686282122 S(ph)PGVAAAVAEDGGLK ddPTM_A549_MK2206_60min_R1 2 SPGVAAAVAEDGGLK 15 0 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLK;S(1)PGVAAAVAEDGGLK 138.19 6.2872e-10 12347800.0 4233.200000000001 5299.700000000001 5242.6 4846.5 6342.7 4803.8 5144.0 4684.700000000001 7330.1 6225.4 6433.0 True False 4947.660668196658 5569.43209315108 5986.079512385389 6033.892717567651 5409.697232123885 5312.134927495635 6078.598214985495 5348.770571292048 5669.8440537643955 4819.077816271925 4835.508558232163 1.0231934466900203 1.1517779414679055 1.2379420779215555 1.2478300151687896 1.1187442162446803 1.0985679920785258 1.2570752676338557 1.1061443707272707 1.1725434844100993 0.9966020653748477 1.0 12.239451912907384 -10.73402580347142 0.6937967012912937 0.9835853982816274 1.1628907698105637 0.44503186087580837 0.06802492487601444 0.6880391643838033 0.5009404358690364 0.07330112285294951 0.013346700483477065 1.8449058014192934e-11 10.73402580347142 0.17930537152893633 S(ph)PGVAAAVAEDGGLK ddPTM_A549_PD325901_60min_R1 2 SPGVAAAVAEDGGLK 15 0 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLK;S(1)PGVAAAVAEDGGLK 201.16 1.1906e-38 31677000.0 6040.9 6288.6 7115.8 6838.7 7066.9 6290.5 7399.6 7328.2 5588.4 8060.5 6974.3 True False 6654.167720924463 6818.562391843623 7598.720978781495 7261.110967185417 6570.5453234814895 6239.2722536086285 7681.195827216484 7182.03330213831 5353.538982184487 7551.558654386468 6116.505313730301 1.0879035298125581 1.1147807517696988 1.2423304794199923 1.1871339261139382 1.0742319325272165 1.0200714188219113 1.2558144615641504 1.174205356450213 0.8752610694487405 1.2346198142646532 1.0 12.578491884215337 -8.755061870950877 24.993965646604675 0.941095502364673 1.1454593001686169 0.0 0.11407141655323728 77.70786852128614 304543.0290248504 0.013701511301870785 0.015353365269745666 1.7576731924981261e-09 8.755061870950877 0.20436379780394387 S(ph)PGVAAAVAEDGGLKK ddPTM_A549_MK2206_60min_R1 2 SPGVAAAVAEDGGLKK 16 1 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK 132.01 1.6246e-10 40945000.0 9496.3 10763.5 9494.0 8921.8 14559.2 10820.400000000001 10393.2 10229.4 15181.900000000001 15508.1 17066.9 True False 11099.043277755813 11311.316175374397 10840.391960208079 11107.641400514825 12417.560966455612 11965.40754599978 12281.509908240141 11679.448776223637 11743.223890512503 12004.809439156788 12828.71770752254 0.8651716820651157 0.8817183785049408 0.8450097825327826 0.8658419067091557 0.9679502854111574 0.9327048750151755 0.9573450899958983 0.9104143564851386 0.9153856338756661 0.9357762570546995 1.0 13.647089352825743 -12.02072655095771 0.015459607573750934 1.9797957686569034 1.2894572800560119e-06 0.47039741217342845 0.03362233544400092 1020.842788237859 2.282134424868072 164.69474666799448 129.2745891336232 9.533962712093695e-13 12.02072655095771 -1.9797944791996234 S(ph)PGVAAAVAEDGGLKK ddPTM_A549_PD325901_60min_R1 2 SPGVAAAVAEDGGLKK 16 1 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK 187.43 1.3363999999999998e-34 76585000.0 15857.9 15963.3 15757.1 16476.4 20500.5 18132.6 16777.5 17142.7 19557.3 18019.8 19015.9 True False 17467.78233403104 17308.58331420623 16826.471561139708 17494.10980738062 19060.615602885606 17984.934117444376 17415.976943500278 16800.775400312006 18735.37469334275 16882.02675272169 16677.064851721905 1.0474134680976246 1.0378674825635832 1.0089588132411906 1.048992131584495 1.1429238761350502 1.0784232283888633 1.0443070827119845 1.007418004888152 1.1234215888660002 1.012290046409373 1.0 14.025577777655803 -6.518135136261663 24.966312652826034 1.0622753584125282 1.0315448046023536 0.06351992020559749 0.04370838925777313 475.85677508070796 2504499.781476329 0.007490208507661743 0.015940471924524732 3.0329472971544486e-07 6.518135136261663 -0.030730553810174532 S(ph)PGVFRPEQDPVPR ddPTM_A549_PD325901_60min_R1 1 SPGVFRPEQDPVPR 14 1 E9PD50;Q92540-2;Q92540;Q92540-5;Q92540-4 E9PD50 SMG7 Protein SMG7 1 S(1)PGVFRPEQDPVPR 58.246 0.0029274 7200100.0 1110.1 869.4 1051.8 895.03 1206.8 896.27 1049.9 1070.2 1215.5 1242.6 1363.5 True False 1222.796534787572 942.6673891595649 1123.1814729872078 950.3139703393874 1122.0385312339863 888.9710742773715 1089.8545190273248 1048.854021444341 1164.4167620151104 1164.142023936558 1195.7981439386422 1.022577715968018 0.7883164846323213 0.9392734707613325 0.794711026402253 0.9383176725281482 0.7434123215389317 0.9114034208462918 0.8771162815069221 0.9737569571565232 0.9735272042672543 1.0 10.223758161391538 -8.78726238394858 2.574400940602202 0.9897693093377585 0.8704092587136555 0.2736427966020252 0.07590803285629462 0.20867924879444144 2.7101911702647823 0.012219751280672349 0.013139622098755903 1.63206561897535e-09 8.78726238394858 -0.11936005062410304 S(ph)PGVPR ddPTM_A549_MK2206_60min_R1 1 SPGVPR 6 0 H0Y4E4;P09848 REV__A8MXZ1 LCT Lactase-phlorizin hydrolase;Lactase;Phlorizin hydrolase 1 S(1)PGVPR 63.053999999999995 0.060422000000000003 77452000.0 760.1 696.11 584.88 628.77 1056.8 761.59 594.17 802.57 1000.6 934.18 1023.5 True False 888.3862973391947 731.5390256737925 667.8247787746476 782.8186782265578 901.3461199344946 842.1809482974728 702.1229979389449 916.3367552675426 773.9656976298623 723.1480891838129 769.3367028370307 1.154743162601177 0.9508697855908158 0.8680526696724017 1.0175241546904115 1.1715886121260843 1.0946844797496589 0.9126342150969448 1.1910737546882006 1.0060168646260625 0.9399630701578501 1.0 9.587471326584156 -5.24264634377916 23.142003104596945 1.0153616343767957 1.1547435065428302 0.14538210885134106 0.0972338859325169 2131.0965291833527 2624146.688075225 0.012524858567106669 0.5379980007238118 5.719441947112536e-06 5.24264634377916 0.13938187216603448 S(ph)PGVQPQLVLGGAAQTASLGTATAVQTGTPQR ddPTM_A549_PD325901_60min_R1 1 SPGVQPQLVLGGAAQTASLGTATAVQTGTPQR 32 0 O00268 O00268 TAF4 Transcription initiation factor TFIID subunit 4 1 S(1)PGVQPQLVLGGAAQTASLGTATAVQTGTPQR 88.29299999999999 1.9711e-09 1824100.0 880.66 1005.6 1109.1 1133.0 1020.0 1531.7 888.35 1028.1 1178.1 892.12 1062.8 True False 970.0639548923729 1090.3454411535074 1184.370195560099 1202.9828367703042 948.358718808972 1519.226343033516 922.156645373773 1007.5937389711528 1128.588553953108 835.7913909498483 932.0823376442897 1.0407492082127385 1.1697951963226831 1.2706712140404166 1.2906400949627244 1.0174623855718783 1.6299271874125973 0.9893510563716907 1.0810136597134838 1.2108249543763063 0.8966926602881419 1.0 9.86431359407942 -11.098320351067558 0.47062352093859644 0.9247597134476635 1.2030189711225519 0.21654564104522767 0.17197343746744825 3.334536737843417 0.7750896042514974 0.4556722585492508 0.03979099028144188 7.974062750274603e-12 11.098320351067558 0.27825925767488835 S(ph)PGYEPR ddPTM_A549_MK2206_60min_R1 2 SPGYEPR 7 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYEPR;S(1)PGYEPR 100.84 0.011115 198004000.0 2311.8900000000003 2274.56 2451.4300000000003 2045.04 3617.6000000000004 2589.41 2543.5 2457.55 3724.3 3158.8999999999996 3596.7 True False 2702.0805117162363 2390.325388568733 2799.0796358766474 2546.0748918053328 3085.4558322057414 2863.4196474887535 3005.6210264027236 2805.915238431228 2880.751996485005 2445.30229604867 2703.5401261298966 0.9994601099500787 0.8841464439406976 1.0353386690374429 0.9417559100371207 1.1412650407458738 1.0591370994695475 1.111735312286729 1.0378670585695655 1.0655480821765297 0.9044815989282569 1.0 11.400634053820674 -6.715225465065895 24.999999652361925 1.0468966984918227 0.9643991002617679 0.25044776726632045 0.0670040606994221 110.11536773246726 59567.67556503125 0.0076155393289008555 0.015852967592580734 1.9265244935216328e-07 6.715225465065895 -0.08249759823005476 S(ph)PGYEPR ddPTM_A549_PD325901_60min_R1 2 SPGYEPR 7 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYEPR;S(1)PGYEPR 74.26899999999999 0.018662 236900000.0 2325.8 2738.04 2201.26 2156.06 2293.35 1939.13 1775.65 2135.41 2186.42 2393.66 2446.3 True False 2561.913503836535 2968.7842399522146 2350.6507408517036 2289.2349294324663 2132.273007627994 1923.3383681965017 1843.2233324229628 2092.817572353262 2094.532370880362 2242.5238990954285 2145.420608373378 1.1941311152869623 1.383777254849387 1.0956596257523263 1.0670331591380238 0.9938717840715848 0.8964854540363275 0.8591431093879833 0.9754812479125021 0.9762805310555871 1.0452607243274654 1.0 11.06704479957955 -6.115244049165916 1.773849840661094 0.9723075333674986 1.289546866234415 0.738752628269746 0.07076467272138293 0.12874911901967642 0.759249576460101 0.009570087212495207 0.03888515380125546 7.66930396335398e-07 6.115244049165916 0.3172393328669163 S(ph)PGYES(ph)ESSRYESQNTELK ddPTM_A549_MK2206_60min_R1 1 SPGYESESSRYESQNTELK 19 1 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 2 S(0.994)PGY(0.016)ES(0.92)ES(0.035)S(0.033)RYES(0.001)QNTELK 72.033 0.00022586 8048700.0 1841.9 1680.7 1394.4 1486.2 2079.0 1662.9 1769.5 1570.9 2327.9 2145.3 2686.7 True False 2152.7676898685213 1766.240451149881 1592.1468874356606 1850.3190667180522 1773.1818540346471 1838.8669742563152 2090.995245221003 1793.5798856794831 1800.6343668924223 1660.6752400244418 2019.5182408522223 1.0659808098391172 0.8745850447998628 0.7883795527213391 0.9162180510621338 0.8780222026052991 0.9105473459255938 1.0353930966915248 0.8881226469747583 0.8916157975045412 0.8223125725884252 1.0 10.979795461586075 -7.540836619995923 24.985491627744278 0.9489933617313338 0.8968654373191073 0.0 0.08241096898628339 457.2707865672378 636216.1990092588 0.011687061040324452 0.01733654070188142 2.8784810851865507e-08 7.540836619995923 -0.05212792441222647 S(ph)PGYESESSR ddPTM_A549_MK2206_60min_R1 2 SPGYESESSR 10 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYESESSR;S(1)PGYESESSR 180.81 1.4353e-12 71449000.0 8028.900000000001 8805.2 7521.299999999999 7143.5 12706.6 10329.5 8561.2 9560.8 12944.1 10897.7 11519.5 True False 9383.982032241362 9253.34706994998 8587.933436940493 8893.657820683897 10837.47597233124 11422.560833832835 10116.659222032238 10916.072678722008 10012.282017480215 8435.902001218643 8658.89022797379 1.0837395769177276 1.0686527749313313 0.9918053250283667 1.0271128962868308 1.2516010351210152 1.3191714565142088 1.1683551766655864 1.2606780304774006 1.1563008369287437 0.9742474819654426 1.0 13.079966417559245 S(ph)PGYESESSR ddPTM_A549_PD325901_60min_R1 2 SPGYESESSR 10 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(0.994)PGYES(0.006)ESSR;S(1)PGYESESSR 166.65 1.2955999999999997e-09 69097000.0 10095.4 10781.4 9702.5 9449.7 12525.8 9636.8 8870.3 9937.6 10749.5 11431.7 10649.6 True False 11120.277576159318 11689.986415326586 10360.96999587221 10033.386507174184 11646.031019664135 9558.32109587086 9207.864120514409 9739.386772103613 10297.735897393199 10709.90051105388 9339.76671337657 1.1906376162728638 1.25163580355642 1.1093392708656262 1.0742652161540822 1.2469295408614964 1.0234004112952064 0.9858773139726019 1.0427869422214477 1.1025688556700897 1.1466989315391551 1.0 13.189170799730004 -7.278736261370035 24.870293369747245 1.0423145315519855 1.1696479258524695 0.476762678104666 0.06447717110578931 491.4175653975018 706582.507504673 0.00942770378343468 0.015093267514372009 5.2633680350626705e-08 7.278736261370035 0.12733339430048396 S(ph)PGYESESSRYESQNTELK ddPTM_A549_MK2206_60min_R1 1 SPGYESESSRYESQNTELK 19 1 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYESESSRYESQNTELK 135.68 2.2680999999999998e-17 13975000.0 2983.3 2955.8 2680.5 2376.7 4618.4 2653.3 2763.2 3160.2 4740.6 4498.5 5575.3 True False 3486.808105317747 3106.2375947574315 3060.6352063764243 2958.9916066941173 3939.0394779574854 2934.0704448820047 3265.237672559862 3608.1680277066034 3666.861669182615 3482.285725656063 4190.799139547921 0.8320150857179672 0.7412041215348045 0.7303225720110718 0.70606858218772 0.9399256196235656 0.7001219450471002 0.779144397961315 0.8609737445197222 0.8749791023337317 0.8309359646455667 1.0 12.033009660980907 -9.368702511744315 0.43266901756475024 1.0065307827743188 0.7589986509809915 0.23633444400546755 0.08119648010325507 0.45805184831230517 0.20451553525320823 0.04373979526225643 0.024206478934788684 4.2785586365004873e-10 9.368702511744315 -0.24753213179332734 S(ph)PHIPYK ddPTM_A549_MK2206_60min_R1 2 SPHIPYK 7 0 Q9UPT9-2;Q9UPT9 Q9UPT9-2 USP22 Ubiquitin carboxyl-terminal hydrolase 22 1 S(0.997)PHIPY(0.003)K;S(0.973)PHIPY(0.027)K 57.59 0.010699 26514000.0 4559.4 4534.1 4184.8 3966.2 5756.8 5443.7 4912.1 5610.4 6735.6 5990.0 5327.0 True False 5328.915253372354 4764.866323293078 4778.267566365999 4937.919178049483 4909.982345986844 6019.748720764389 5804.564986747718 6405.691381129404 5209.9973545429775 4636.8548397643235 4004.158882279298 1.3308451063108069 1.1899793348311793 1.1933261658303762 1.233197613586866 1.2262206596537253 1.50337409122431 1.4496340323647623 1.5997595423793662 1.3011465098451032 1.158009703432366 1.0 11.967283505121895 -10.28817405873822 0.9663536309242651 1.0215801208762554 1.3322682641554227 0.3368556124516484 0.13379092509945253 0.3642601239274627 0.6657209349107627 0.06511450241051765 0.026729882171982428 5.1502219001533746e-11 10.28817405873822 0.3106881432791673 S(ph)PHIPYK ddPTM_A549_PD325901_60min_R1 2 SPHIPYK 7 0 Q9UPT9-2;Q9UPT9 Q9UPT9-2 USP22 Ubiquitin carboxyl-terminal hydrolase 22 1 S(0.974)PHIPY(0.026)K;S(0.999)PHIPY(0.001)K 68.22399999999999 0.0070488999999999994 40029000.0 3901.3 3897.4 4469.6 4167.0 4781.2 3754.6 3770.9 4330.5 4854.3 4950.3 5039.5 True False 4297.3571040147335 4225.8475759264875 4772.9339338882155 4424.386126056361 4445.385006244565 3724.023782433661 3914.4036630156584 4244.124780288471 4650.290652282974 4637.73721317652 4419.6734480225805 0.9723245743274149 0.9561447526891804 1.0799290920517417 1.0010662955282112 1.005817524422192 0.8426015691498289 0.8856771227672972 0.9602801723252535 1.0521796931317573 1.049339338690623 1.0 12.10972406325563 -8.74626764217798 24.5907181520387 1.0246404093094137 0.9627586434906524 0.2129616259162358 0.05995963504979943 269.8964024193805 437453.9858197551 0.011074116949623323 0.012532671347646249 1.7936279290723379e-09 8.74626764217798 -0.06188176581876126 S(ph)PHKDLGHR ddPTM_A549_MK2206_60min_R1 2 SPHKDLGHR 9 1 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 S(1)PHKDLGHR;S(1)PHKDLGHR 73.848 0.00092746 65120000.0 1154.51 1204.04 1042.67 1009.3399999999999 1490.82 1145.23 1209.96 1130.3200000000002 1455.1599999999999 1616.0900000000001 1676.93 True False 1349.3630629405002 1265.3204931293521 1190.536284511287 1256.6283453109938 1271.5223528773115 1266.4174784578518 1429.7940700240763 1290.5463214598215 1125.5685834130227 1251.0141465767497 1260.5020000864697 1.0704965663266974 1.0038226778240351 0.9444937686966121 0.9969268951773101 1.0087428284842752 1.0046929543713348 1.134305276727838 1.023835203253379 0.8929526358036792 0.9924729564022357 1.0 10.299782692039454 -8.727154379409912 24.81558401213553 0.9494498531690463 1.0218311358411876 0.20633565850100344 0.05223342028311363 180.13184774681136 130379.7931451308 0.010059286308818255 0.011405861848891492 1.874328118978037e-09 8.727154379409912 0.07238128267214128 S(ph)PHKDLGHR ddPTM_A549_PD325901_60min_R1 4 SPHKDLGHR 9 1 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 S(1)PHKDLGHR;S(1)PHKDLGHR;S(1)PHKDLGHR;S(1)PHKDLGHR 85.274 0.00054237 111514000.0 5720.66 5796.85 5889.15 5286.22 6393.96 5278.879999999999 5366.130000000001 5562.070000000001 6540.61 6115.7 6873.789999999999 True False 6301.417191872695 6285.3708935468485 6288.82313333582 5612.737803523319 5944.870307564521 5235.890551487085 5570.341013609007 5451.130150490499 6265.730907283962 5729.553658288109 6028.357406544917 1.0452958852491594 1.0426340824986413 1.043206749239539 0.931055912084714 0.9861509374195772 0.8685434851295546 0.9240230195312165 0.9042480037053329 1.0393761492112812 0.9504336375390748 1.0 12.557549237988741 -6.138051754199516 14.995243790400384 0.9863183584685489 1.0437012173000026 0.21443346132624308 0.05379663850549303 1.7697482932417836 208.37045234468277 0.008924812874810784 0.023615649434194627 7.276930813142478e-07 6.138051754199516 0.057382858831453776 S(ph)PHQLLSPSSFSPSATPSQK ddPTM_A549_PD325901_60min_R1 1 SPHQLLSPSSFSPSATPSQK 20 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 S(1)PHQLLSPSSFSPSATPSQK 97.94 2.7976999999999997e-07 5142400.0 2177.2 1889.7 1927.6 2823.5 3241.9 2071.6 2213.8 2530.2 2759.7 2922.8 2546.6 True False 2398.227741230073 2048.951650902728 2058.4185276004405 2997.9011823662463 3014.2001279478463 2054.72957643679 2298.0473704378423 2479.733176096498 2643.719406115262 2738.253909191831 2233.384344227462 1.0738087904254703 0.9174200832017876 0.9216588863984614 1.3423131536292892 1.349611022275914 0.9200071549474081 1.0289529325203306 1.110302927709583 1.1837279207890823 1.2260558359645015 1.0 11.125015831298002 S(ph)PHS(ph)KSPAEQR ddPTM_A549_MK2206_60min_R1 1 SPHSKSPAEQR 11 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 2 S(0.999)PHS(0.566)KS(0.435)PAEQR 53.403 0.060714 12660000.0 762.21 765.97 942.22 634.55 850.49 805.99 807.0 838.38 998.52 1397.4 1672.2 True False 890.8524137546477 804.9546012776067 1075.8409640559578 790.0147784860324 725.3840476372907 891.2793268271379 953.6214540228028 957.2229324310681 772.356814308785 1081.7263694635512 1256.9465896278293 0.7087432521841849 0.6404047776731282 0.8559162122986504 0.6285189720908895 0.5771001358554705 0.7090828951539124 0.7586809669495675 0.7615462266495295 0.6144706709753459 0.8605985157920201 1.0 10.295707632498349 -10.85847513343549 0.9532047099815025 1.0120192204000091 0.6911240625250897 0.5118703535801626 0.08502504515635728 0.2815454718930979 0.42523418414747577 0.06533684523672631 0.013657259442992006 1.385239498839235e-11 10.85847513343549 -0.3208951578749194 S(ph)PHS(ph)KSPAEQR ddPTM_A549_PD325901_60min_R1 2 SPHSKSPAEQR 11 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 2 S(1)PHS(0.649)KS(0.351)PAEQR;S(1)PHS(0.65)KS(0.35)PAEQR 92.95200000000001 0.00084836 34626000.0 2913.1000000000004 3208.0 3408.4 3182.1 3446.7 2770.8 2712.3 2861.5 3349.9 3402.2 3856.3 True False 3208.835767489126 3478.3494184769775 3639.7145203742175 3378.6510899265527 3204.61568246949 2748.235523455811 2815.51806072751 2804.425137696677 3209.1153525910477 3187.3845113769166 3381.999547099806 0.9487984024837689 1.0284890255114894 1.0762019538102576 0.9990099179119865 0.947550594800514 0.8126067094871517 0.8325010164894684 0.8292210269813841 0.9488810710643019 0.9424556292771301 1.0 11.723660751211607 -6.704254903331347 4.183502871765968 0.9387217291368242 1.0210340747197835 0.3010214420174674 0.06842417633615074 0.3063186011447929 10.882015967488933 0.012091781200967199 0.025528048952582164 1.9758096247124675e-07 6.704254903331347 0.0823123455829593 S(ph)PHSKS(ph)PAEQR ddPTM_A549_PD325901_60min_R1 2 SPHSKSPAEQR 11 1 P10398;Q96II5 P10398 ARAF Serine/threonine-protein kinase A-Raf 2 S(1)PHS(0.433)KS(0.567)PAEQR;S(1)PHS(0.187)KS(0.813)PAEQR 67.846 0.0012825999999999998 132129000.0 7902.0 9625.6 9263.2 7766.5 9683.4 8732.2 9135.5 9347.3 9695.7 10555.3 12410.099999999999 True False 8704.205222855055 10436.783093046144 9891.856456146706 8246.219065998737 9003.271389916463 8661.087858351688 9483.156451637415 9160.86076868501 9288.223446704982 9888.83655662123 10883.736374105561 0.799744216844868 0.9589338380041249 0.9088658633519715 0.757664351887283 0.8272224795279794 0.7957825842748296 0.8713144204962197 0.841701824979922 0.8534039347740356 0.9085883943448517 1.0 13.40988629670937 -10.516289493382072 0.6753827585965639 1.008749412993533 0.8455101004007973 0.29641203947885164 0.058542193052725164 0.5245258597675884 0.3980278797660938 0.04757206532055261 0.01112603737259604 3.0458639911867487e-11 10.516289493382072 -0.16323931259273572 S(ph)PIALPVK ddPTM_A549_PD325901_60min_R1 2 SPIALPVK 8 0 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(1)PIALPVK;S(1)PIALPVK 68.422 0.0075459 2970700.0 2187.0 2080.8 2136.8 2434.3 2536.7 2338.4 2268.64 2304.2 2220.9 2485.5 2274.8 True False 2409.022630015692 2256.156318568235 2281.8160976222343 2584.6611823035787 2358.53094313992 2319.356845694048 2354.974336647441 2258.240923390068 2127.5632963877897 2328.5651058219164 1995.0140211453056 1.2075216537238724 1.130897474732038 1.1437594289749804 1.2955604095553004 1.1822127153702535 1.1625767143042645 1.1804299677530525 1.1319423820859404 1.0664402725181799 1.1671923511019358 1.0 10.962183170541145 -8.814730888027404 0.8732135848470582 1.0162795772511861 1.191114323878714 0.275700383396141 0.06131425160773474 0.18175119064754813 0.28286611898586317 0.010361141938584817 0.010452393891723323 1.5320364989589565e-09 8.814730888027404 0.17483474662752796 S(ph)PIKASDLTK ddPTM_A549_MK2206_60min_R1 2 SPIKASDLTK 10 1 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 S(1)PIKASDLTK;S(1)PIKASDLTK 69.34899999999999 0.0010172 28355000.0 4228.200000000001 4696.2 4492.2 3949.5 7701.5 5078.2 4628.4 4960.1 8715.3 5594.5 6659.799999999999 True False 4941.816790434923 4935.216520907996 5129.2615087051545 4917.12767729979 6568.619552115363 5615.571753363659 5469.32036902 5663.209364669178 6741.298465474259 4330.698564451003 5005.987858870594 0.9871811378203884 0.9858626628833724 1.0246252394751856 0.9822492215171189 1.312152513609435 1.121770949446648 1.0925556599839494 1.1312870754638347 1.3466469866739088 0.865103689130412 1.0 12.28943907669344 -6.723905662465061 24.991303553434758 1.1645876929583105 0.9964457194573703 0.14660120437956392 0.12828415521173045 174.5768009030078 116238.74075306422 0.01845198825242639 0.03841021634874837 1.8884015035031766e-07 6.723905662465061 -0.1681419735009403 S(ph)PIKASDLTK ddPTM_A549_PD325901_60min_R1 1 SPIKASDLTK 10 1 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 S(1)PIKASDLTK 77.078 0.00039809 20686000.0 2874.9 3494.8 3620.6 3934.1 4496.0 4957.6 4388.0 4821.5 4571.3 5533.0 4584.7 True False 3166.7577316104803 3789.3190610016673 3866.315688436476 4177.100422010641 4180.216470357977 4917.226949287041 4554.987741205735 4725.33140010642 4379.184158123963 5183.645435732314 4020.8109648078403 0.7875917966120608 0.9424265637374384 0.9615760905639225 1.038870133057914 1.0396451131240276 1.2229440757909498 1.132852994351955 1.1752184923551237 1.0891295801898635 1.2892039643500244 1.0 11.973270795248249 -5.416025049294887 0.9948389156705026 1.072643787832936 0.6994695103734112 0.5347414267070139 0.09212579601448255 0.8862601425615203 0.7921125563981126 0.011838714995335666 0.33095961007634356 3.836851146129817e-06 5.416025049294887 -0.3731742774595248 S(ph)PILEEK ddPTM_A549_MK2206_60min_R1 2 SPILEEK 7 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;A0A0A0MR81 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(1)PILEEK;S(1)PILEEK 130.66 0.005698699999999999 68515000.0 5216.5 5103.5 4846.1 5142.9 10495.3 8427.7 6700.0 8650.900000000001 10547.5 6337.9 6139.799999999999 True False 6096.917668819774 5363.246351189038 5533.349850259578 6402.91073087355 8951.455273039843 9319.513620145508 7917.303273795262 9877.191567270134 8158.508090896434 4906.163988137279 4615.118210140496 1.3210750821990687 1.1621037873753115 1.198961672986298 1.3873774060228523 1.9395939313908361 2.019344509891069 1.7155147307817797 2.1401817066283657 1.7677787912279865 1.0630635586662305 1.0 12.172151885729098 -3.6133976670236287 16.20010334252195 1.4858186938730484 1.3028979463972354 0.0 0.391925969864709 0.0 0.0 0.059185364010236045 0.0 0.0002435579628911485 3.6133976670236287 -0.182920747475813 S(ph)PILEEK ddPTM_A549_PD325901_60min_R1 2 SPILEEK 7 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;A0A0A0MR81 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(1)PILEEK;S(1)PILEEK 110.76 0.0083039 75967000.0 7449.3 7466.0 8096.6 7131.5 9770.7 7062.1 6273.299999999999 7581.1 7970.700000000001 8404.3 8374.5 True False 8205.547452115186 8095.186021929284 8646.08396481102 7571.996558188376 9084.439739085119 7004.588599031796 6512.0338643814775 7429.889013242106 7635.719197855898 7873.651063713183 7344.489590329411 1.117238625121008 1.1022121990054048 1.1772205349974811 1.0309765525651404 1.2369055231621164 0.9537202705351823 0.8866557415992475 1.011627686561792 1.0396528041798783 1.072048774373719 1.0 12.842446517977738 -7.279378973660919 24.99880315460143 1.0035009370823667 1.1280038742424991 0.5268691095701874 0.06515174079687645 526.1066761114769 733127.3504177324 0.00925883302129868 0.014819496170592398 5.255584538893203e-08 7.279378973660919 0.1245029371601325 S(ph)PILEEKDIPPLEFPK ddPTM_A549_PD325901_60min_R1 1 SPILEEKDIPPLEFPK 16 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;A0A0A0MR81 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(1)PILEEKDIPPLEFPK 116.24 4.5466e-08 29920000.0 10160.0 11185.0 11210.0 10740.0 12404.0 11816.0 11554.0 13415.0 12642.0 12776.0 13148.0 True False 11191.435720603318 12127.599203760918 11970.77801120613 11403.38540769026 11532.785831476936 11719.774413582314 11993.693792591397 13147.427301136086 12110.700703739221 11969.3211796342 11530.879352039068 0.9705622076970457 1.0517497264088822 1.0381496194467834 0.9889432591863636 1.0001653368645758 1.0163816701030561 1.040136959760184 1.140192946239712 1.0502842267270467 1.0380232776884966 1.0 13.493214917556585 -7.691036934293254 5.859942928845877 1.03603377621351 1.0123408042397426 0.16694315542526594 0.039356476553026556 0.5154608969409645 31.666085200063392 0.006862275341481622 0.010179248629881177 2.0368688461463376e-08 7.691036934293254 -0.023692971973767296 S(ph)PILLPK ddPTM_A549_MK2206_60min_R1 2 SPILLPK 7 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 S(1)PILLPK;S(1)PILLPK 89.355 0.012667 176247000.0 3966.0 3773.5 3891.8 3503.9 5657.9 3814.3 4487.700000000001 5044.0 6639.0 6069.299999999999 5639.8 True False 4635.363840609457 3965.555032078347 4443.7157605580205 4362.355657296048 4825.630404974809 4217.926694272579 5303.057000270298 5759.002446602149 5135.277100304472 4698.240914688082 4239.282009438479 1.0934313476407393 0.9354308166452014 1.0482236734108237 1.0290317198958583 1.138313137515 0.9949625160302255 1.2509328203368861 1.3584853363801024 1.211355387273392 1.1082633578581849 1.0 12.049604226541184 -6.732300880163882 6.282510881940858 1.127677169623123 1.0207651782701408 0.22476141360050694 0.10585115786457522 0.2902896449467495 34.85511043698171 0.018262305990675624 0.03763465742061177 1.8522479373867508e-07 6.732300880163882 -0.10691199135298213 S(ph)PILLPK ddPTM_A549_PD325901_60min_R1 2 SPILLPK 7 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 S(1)PILLPK;S(1)PILLPK 101.54 0.010915000000000001 269330000.0 6338.2 5941.6 5897.9 6026.9 6784.1 6218.3 5619.0 5753.7 5959.200000000001 6566.1 6638.4 True False 6981.649398063768 6442.3194840470105 6298.166960953844 6399.167924916991 6307.608219874452 6167.660226470793 5832.834119834784 5638.937939809669 5708.755547676224 6151.515325422366 5821.918884284764 1.1992007337837514 1.106562906851366 1.0818025956965196 1.0991509933589778 1.0834242704584427 1.0593861489756058 1.0018748518773568 0.9685703376993073 0.9805625363633964 1.0566130253080799 1.0 12.507279023460562 -6.712941536647911 0.5628203943467541 0.986576395094544 1.1676101234911593 0.7291524855967821 0.03355000591011367 0.35420508772647286 0.17344946176880505 0.005760219061159872 0.03136857860755747 1.936682656504534e-07 6.712941536647911 0.18103372839661536 S(ph)PIRQDR ddPTM_A549_MK2206_60min_R1 7 SPIRQDR 7 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR 65.404 0.0077908000000000005 815826000.0 9558.61 9892.72 8349.08 7179.700000000001 11512.690000000002 8484.16 8724.539999999999 9139.28 13590.43 11055.54 12032.55 True False 11171.869682422583 10396.217192776494 9533.105088175069 8938.72682230898 9819.188551768231 9381.948179870384 10309.675985725027 10434.80092787115 10512.219304457136 8558.085835594009 9044.535753514134 1.2352065365081786 1.1494472990210893 1.0540181771597408 0.9883013419274678 1.0856487076136678 1.0373056656031407 1.1398789574931294 1.1537132708903106 1.1622729558421783 0.9462161540208273 1.0 13.142830737393423 -10.972189124427414 1.2657019427347516 1.0005393555775404 1.1120796394858785 0.36830008175664175 0.0675534157718877 0.512013532584284 1.4702472939641493 0.04851190363325763 0.011432461070933032 1.0661317463104599e-11 10.972189124427414 0.11154028390833814 S(ph)PIRQDR ddPTM_A549_PD325901_60min_R1 7 SPIRQDR 7 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR 102.52 0.002966 909186000.0 18638.35 19358.71 17532.12 19233.81 22417.5 17470.71 18202.54 17340.65 17353.31 20956.98 20630.399999999998 True False 20530.501571171924 20990.13643109865 18721.955092402062 20421.838760548155 20842.972136176595 17328.434330155436 18895.24762051208 16994.77713227324 16624.010728461086 19633.752706259405 18092.991586880635 1.1347212246568856 1.1601252523832906 1.0347628252907326 1.1287154289816939 1.151991478915515 0.957742905419821 1.0443407067194552 0.939301665546359 0.9188093991330478 1.0851578972985312 1.0 14.143143349737851 -7.267021058147306 24.93169428203931 0.9655493181123886 1.119697342494432 0.5527089650029562 0.05627359259661592 180.73046311213645 807268.4641309488 0.007182925927778367 0.011677027051934935 5.407281033904317e-08 7.267021058147306 0.15414802438204345 S(ph)PISDNSGCDAPGNSNPSLSVPSSAESEK ddPTM_A549_MK2206_60min_R1 2 SPISDNSGCDAPGNSNPSLSVPSSAESEK 29 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 S(0.705)PIS(0.202)DNS(0.061)GCDAPGNS(0.013)NPS(0.016)LS(0.003)VPSSAESEK;S(0.812)PIS(0.172)DNS(0.014)GCDAPGNS(0.001)NPSLSVPSSAESEK 61.89 0.00027839 13872200.0 1524.87 1558.2800000000002 1044.71 1065.76 2519.8 1783.23 1659.37 1766.06 2242.8 2124.3999999999996 1970.13 True False 1782.2307765078508 1637.5897960479774 1192.865587186537 1326.8712478437847 2149.140757958875 1971.9302149877262 1960.8560497668122 2016.4044133319167 1734.8093810156474 1644.4965645401214 1480.8923481781337 1.2034843577255554 1.105812855379137 0.8055045923183131 0.8959943978886559 1.4512471217795495 1.3315824188123406 1.3241043835354767 1.3616144453799064 1.1714621816703252 1.1104767787903433 1.0 10.532251053989448 -5.250142962244325 20.923366502269918 1.1263116772520292 1.2034848281985382 0.0 0.19466424766315174 970.9222624954638 1797979.2128903463 0.028851551697944608 0.514186580818059 5.6215624260091145e-06 5.250142962244325 0.077173150946509 S(ph)PISDNSGCDAPGNSNPSLSVPSSAESEK ddPTM_A549_PD325901_60min_R1 1 SPISDNSGCDAPGNSNPSLSVPSSAESEK 29 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 S(0.668)PIS(0.146)DNS(0.182)GCDAPGNS(0.003)NPS(0.001)LSVPSSAESEK 69.444 9.7304e-05 7939800.0 1485.2 1573.7 1596.6 1585.8 1719.5 1562.9 1312.6 1529.9 1483.1 2063.4 2170.5 True False 1635.9764106535474 1706.3212219006307 1704.9548771357454 1683.7512643868918 1598.728251952967 1550.1722605778427 1362.5517112822802 1499.384944316669 1420.7704646191776 1933.1165718579537 1903.5422599331298 0.8594379253292849 0.8963926138212307 0.8956748232086212 0.8845357940443312 0.8398701124760578 0.8143618837400013 0.7157979835604731 0.7876814588657156 0.7463824126862769 1.0155364619674179 1.0 10.894470883729156 -4.425641182273496 16.700701698255056 0.8580949395206924 7.328556436992953 0.0 0.08966384503097817 1185129.110326475 125622.41454079903 0.013840524256110988 0.0 3.752829360876033e-05 4.425641182273496 6.47046149747226 S(ph)PISFLSK ddPTM_A549_MK2206_60min_R1 1 SPISFLSK 8 0 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(0.999)PIS(0.001)FLSK 64.297 0.009487200000000001 2736400.0 1964.8 1594.7 1981.9 1700.4 1935.6 1945.4 1797.2 1561.3 2995.4 1923.3 2887.2 True False 2296.4102052520057 1675.863418485581 2262.9632216069535 2116.9980763338563 1650.875804073816 2151.2609367479936 2123.727976666395 1782.619056280717 2316.9466826708867 1488.8251942101385 2170.2285573337317 1.058142100974515 0.7722059562908384 1.0427303677116628 0.9754724078162198 0.7606921393118268 0.9912600815606992 0.9785734177581435 0.8213969216545475 1.0676049187728909 0.6860223035859679 1.0 11.083631272570615 -8.786743271971476 24.956445508313106 1.0319245524827985 0.9240784453798109 0.0 0.14283501706990917 241.03734211572151 237726.5110084819 0.01585086406541893 0.01687766121367921 1.634017592557917e-09 8.786743271971476 -0.10784610710298759 S(ph)PISPELHSAPLTPVAR ddPTM_A549_PD325901_60min_R1 1 SPISPELHSAPLTPVAR 17 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 S(0.533)PIS(0.467)PELHSAPLTPVAR 74.36399999999999 0.00016056 5531900.0 557.75 810.7 459.35 603.73 773.74 637.54 615.85 1044.6 495.85 492.33 852.1 True False 614.3723694061515 879.0205341518977 490.52425329594405 641.0210309296875 719.3951716580916 632.3480856157137 639.2865087560506 1023.764633527153 475.01114886482316 461.24419977843655 747.2971019069432 0.8221259895674745 1.1762664834492522 0.6563979065946202 0.8577860522862168 0.962662868385744 0.846180299645343 0.8554649912661609 1.3699566489883654 0.6356389549119028 0.6172166312453768 1.0 9.54553811716952 S(ph)PKGEFKDEEETVTTK ddPTM_A549_MK2206_60min_R1 2 SPKGEFKDEEETVTTK 16 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 S(1)PKGEFKDEEETVTTK;S(1)PKGEFKDEEETVTTK 170.91 1.139e-28 55774000.0 7778.9 8608.6 9790.7 7403.1 10622.6 7686.1 7322.8 6347.4 12721.3 13372.599999999999 12483.9 True False 9091.788144154534 9046.740969696471 11179.168481652556 9216.85983233779 9060.02961167313 8499.43800037974 8653.257972141479 7247.163388097242 9839.945861741731 10351.720372325944 9383.803091887838 0.9688809595774931 0.964080435310631 1.1913259871487272 0.982209424269104 0.965496560718052 0.9057562181507604 0.9221482897080497 0.7723055691953202 1.0486095845562045 1.1031476546300143 1.0 13.195957025081212 S(ph)PKGEFKDEEETVTTK ddPTM_A549_PD325901_60min_R1 3 SPKGEFKDEEETVTTK 16 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 S(1)PKGEFKDEEETVTTK;S(0.997)PKGEFKDEEET(0.002)VTTK;S(1)PKGEFKDEEETVTTK 156.23 6.6390000000000004e-21 100098000.0 16680.6 16850.800000000003 18904.2 15542.699999999999 20627.0 18500.0 18784.0 19645.5 19713.7 19874.1 22101.0 True False 18374.002232391296 18270.876053887736 20187.15269218937 16502.737278967183 19178.23067928692 18349.342133655442 19498.835398999203 19253.655090903383 18885.201745238424 18619.24593426488 19382.71710978213 0.9479580250964014 0.9426375028022637 1.0415027252294393 0.8514150614435027 0.9894500637172273 0.9466857525560665 1.0059908158675273 0.9933413866514302 0.9743320112590088 0.9606107249467135 1.0 14.242483204484138 -7.751826551339049 24.952235086357458 0.9893025956743797 0.9538160303795098 0.12600392917995962 0.04380888490280886 288.447549484627 748727.2751348668 0.00607511525595828 0.008944957409119016 1.77081604615526e-08 7.751826551339049 -0.03548656529486993 S(ph)PKPAAPAAPPFSSSSGVLGTGLCELDR ddPTM_A549_MK2206_60min_R1 2 SPKPAAPAAPPFSSSSGVLGTGLCELDR 28 1 H3BQC4;O43294-2;O43294;H3BSN4;H3BS04;H3BN49 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 S(0.998)PKPAAPAAPPFS(0.001)S(0.001)SSGVLGTGLCELDR;S(0.997)PKPAAPAAPPFS(0.002)S(0.001)SSGVLGTGLCELDR 72.91199999999999 1.0502e-05 14623600.0 1654.0300000000002 1930.01 1671.35 1282.21 2610.41 1758.38 1586.9099999999999 2440.08 3164.2 2456.7 2575.8 True False 1933.1898268490315 2028.2392652607732 1908.3725619015986 1596.351507560594 2226.4221469892173 1944.450604481822 1875.2310057042444 2785.968812431598 2447.513752189098 1901.7297637477484 1936.157771536515 0.9984670956411119 1.0475588792803716 0.9856493050084104 0.8244945381149108 1.1499177286685431 1.004283139043326 0.9685321275321899 1.438916215087514 1.2641086321425015 0.9822183872126057 1.0 10.918980802842363 S(ph)PKPAAPAAPPFSSSSGVLGTGLCELDR ddPTM_A549_PD325901_60min_R1 2 SPKPAAPAAPPFSSSSGVLGTGLCELDR 28 1 H3BQC4;O43294-2;O43294;H3BSN4;H3BS04;H3BN49 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 S(0.816)PKPAAPAAPPFS(0.109)S(0.046)S(0.02)S(0.009)GVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR 79.069 1.4875e-06 21830000.0 2601.1000000000004 2794.1 2913.5 2932.3 3280.0 3217.2 3187.3 3541.9 3101.6 3075.5 3377.5 True False 2865.1617571713873 3029.5686128948023 3111.2276302987566 3113.4215112635184 3049.624115385711 3191.0001898592604 3308.594445657481 3471.2540259332045 2971.250538104539 2881.312405131886 2962.088911736533 0.9672774324291562 1.0227811193954706 1.0503491701316927 1.0510898234443158 1.0295518487991164 1.0772803534747806 1.116980125933427 1.1718939334262495 1.003092961298935 0.972729884547155 1.0 11.532399230689322 -8.939047546056539 24.999999941893122 1.001362721151245 1.0620197314275341 0.2653194951770088 0.05042831943959307 77.60012647357051 31827.892357717166 0.009036893325009952 0.00962038554864299 1.150674407547886e-09 8.939047546056539 0.060657010276289114 S(ph)PKPAESPQSATK ddPTM_A549_PD325901_60min_R1 2 SPKPAESPQSATK 13 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(0.994)PKPAES(0.006)PQSATK;S(0.997)PKPAES(0.003)PQSATK 73.156 0.00015301 6084700.0 3630.2 3854.1 3659.5 3447.3 4203.0 4556.9 4022.2 3391.9 4580.8 4540.0 4622.7 True False 3998.735231588005 4178.898532965129 3907.8556763611814 3660.2318916136574 3907.7957795628477 4519.790117235378 4175.267022032291 3324.245893605927 4388.284906161105 4253.343625198754 4054.137205709689 0.9863344600070125 1.030773829528939 0.9639179628300467 0.9028386820403437 0.9639031885894883 1.1148586956726283 1.029878075204758 0.8199638356896723 1.0824214089204518 1.049136575646357 1.0 11.985179199970927 S(ph)PKRDPIDPVSAGASAAK ddPTM_A549_MK2206_60min_R1 2 SPKRDPIDPVSAGASAAK 18 2 E7ER60;A0A1W2PR85;O15056-2;O15056 E7ER60 SYNJ2 Synaptojanin-2 1 S(0.995)PKRDPIDPVS(0.005)AGASAAK;S(1)PKRDPIDPVSAGASAAK 89.26100000000001 1.3400999999999999e-06 10594400.0 3200.2 3561.0 2631.0 2865.5 3803.8 2715.5 2783.6000000000004 3553.7 4585.0 4420.6 4755.9 True False 3740.315522621879 3742.239689739228 3004.1153620505042 3567.5476286371836 3244.26605886339 3002.852407596986 3289.344088497982 4057.447857749814 3546.504820740477 3421.9833897599615 3574.8787738374544 1.0462775828918072 1.046815829707736 0.8403404848399197 0.9979492604745304 0.9075177828703913 0.8399871988871872 0.9201274495154516 1.1349889365323416 0.9920629607625773 0.9572306101128661 1.0 11.803678604777213 S(ph)PKSPNSVK ddPTM_A549_MK2206_60min_R1 1 SPKSPNSVK 9 1 A0A0C4DFM7;Q5TAX3;X6R5G7;E9PRG2;E9PKY2;Q5TAX3-2 A0A0C4DFM7 ZCCHC11 Terminal uridylyltransferase 4 1 S(0.61)PKS(0.385)PNS(0.005)VK 50.95 0.0075466000000000005 12207000.0 4435.0 5141.6 4704.8 3505.1 6319.0 4715.8 4756.7 3873.3 5831.4 6172.9 6502.5 True False 5183.519574660342 5403.285478450781 5372.0113855474 4363.84965734992 5389.483470728684 5214.8228259053085 5620.930818277897 4422.352136483766 4510.597210832282 4778.437602734756 4887.749790129744 1.0605124642689099 1.1054750571238534 1.0990765927494013 0.8928136350519045 1.1026512612433914 1.0669168942395644 1.1500037971724184 0.904782840032893 0.9228371754914545 0.9776354780648283 1.0 12.2549547183911 -8.271909965864738 24.936434672974244 0.9581354424307545 1.0653570223709472 0.42190162063937875 0.06559164030074954 566.2146447758491 1348476.4651042246 0.011110916311807937 0.013500625972635025 5.346751920946834e-09 8.271909965864738 0.10722157994019266 S(ph)PLAGNKDNK ddPTM_A549_MK2206_60min_R1 2 SPLAGNKDNK 10 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(1)PLAGNKDNK;S(1)PLAGNKDNK 44.309 0.016189 8251600.0 4342.299999999999 4784.0 3887.6000000000004 3675.3 5782.6 3844.4 2774.8 4103.0 5931.4 5653.1 5538.9 True False 5075.174080957748 5027.485165883873 4438.920137403093 4575.748664990486 4931.987200163898 4251.211856293812 3278.9452424070278 4684.6128149105125 4587.947370499465 4376.06078375154 4163.438264136813 1.2189862702359442 1.207532055702572 1.0661669168098964 1.0990312272443783 1.1845947717412413 1.0210819967989118 0.7875570704749808 1.1251788828629965 1.101961186747815 1.0510689737965428 1.0 12.023559716360749 -5.588920492912503 0.6893994695338995 1.0383459680538623 1.3005267223741421 0.32182965560220267 0.09481081196391396 2.0621207149130356 0.8733369116407542 0.016522121120335766 0.3839326688383363 2.576792852018661e-06 5.588920492912503 0.2621807543202799 S(ph)PLAIR ddPTM_A549_PD325901_60min_R1 1 SPLAIR 6 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PLAIR 72.492 0.048132999999999995 7532300.0 933.02 944.7 1121.6 1210.4 1345.6 950.39 918.2 1182.3 1139.4 1403.3 1188.1 True False 1027.739503546979 1024.3131844249385 1197.7185207287052 1285.16365898215 1251.0896980679922 942.6503389408007 953.1426034583188 1158.718099003593 1091.514980370233 1314.6953985113234 1041.9712319864323 0.9863415341973294 0.9830532292836626 1.1494736936694054 1.23339648881869 1.2006950476769813 0.9046798126506003 0.9147494424018128 1.1120442325404631 1.047548096207368 1.2617386720024555 1.0 10.025099731142765 -7.253825558242258 24.99816204966547 1.0141058303309967 1.1124890720276273 0.0591438366107182 0.11697345077708395 763.5525145777626 2506940.5630187565 0.014194028173220814 0.024296597624508 5.5740959700829845e-08 7.253825558242258 0.0983832416966306 S(ph)PLAQMEEER ddPTM_A549_MK2206_60min_R1 4 SPLAQMEEER 10 0 A0A0U1RRM2;G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 A0A0U1RRM2;G3V1Q4 SEPT7 Septin-7 1 S(1)PLAQMEEER;S(1)PLAQMEEER;S(1)PLAQMEEER;S(1)PLAQMEEER 80.815 0.00041251 90693000.0 4459.389999999999 5050.38 3791.92 3602.5299999999997 6275.200000000001 5821.23 5067.67 5424.84 6369.25 5213.459999999999 5229.13 True False 5212.026010382093 5307.4227700829015 4329.671274673712 4485.150011723719 5352.126392707173 6437.22869478026 5988.40004201702 6193.827682875736 4926.625044602239 4035.7357650947783 3930.592704353887 1.3260152863482326 1.3502856106672947 1.1015313975110597 1.1410874514562532 1.3616588629950552 1.6377246840278803 1.5235361413518413 1.5757999235115054 1.2534051261900157 1.0267499251765326 1.0 11.940531161308328 -9.761948067597539 1.0877609995557105 1.0443376759656071 1.3664930498277401 0.4143066835438569 0.15963031096250052 0.3490072290701701 0.84585891094702 0.05452553024544283 0.03502565531939721 1.7300232209054981e-10 9.761948067597539 0.322155373862133 S(ph)PLAQMEEER ddPTM_A549_PD325901_60min_R1 4 SPLAQMEEER 10 0 A0A0U1RRM2;G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 A0A0U1RRM2;G3V1Q4 SEPT7 Septin-7 1 S(1)PLAQMEEER;S(1)PLAQMEEER;S(1)PLAQMEEER;S(1)PLAQMEEER 92.925 0.00060987 97011000.0 3705.3900000000003 3502.5099999999998 3617.49 3713.9599999999996 4076.55 3745.55 3774.4999999999995 2883.37 3537.7799999999997 4141.35 3623.1000000000004 True False 4081.5584650360533 3797.678809759912 3862.9946251345254 3943.3628741848565 3790.227191334032 3715.0474826331465 3918.1406629856515 2825.858923389993 3389.09940956135 3879.864454232786 3177.4816687232064 1.2845262036322393 1.195185120072122 1.2157409634047631 1.2410340279852505 1.1928399866605814 1.1691798316891464 1.2330962288635519 0.8893391742289721 1.0665992011601997 1.2210501455990508 1.0 11.633668086833813 -8.237741235403686 24.973225059956146 1.0216700768408158 1.2157225914732148 0.5239999481584515 0.07893621650003019 267.3163755857063 281699.67364564724 0.008197908911649392 0.010580513306522814 5.7844059556504065e-09 8.237741235403686 0.19405251463239903 S(ph)PLAQMEEERR ddPTM_A549_MK2206_60min_R1 6 SPLAQMEEERR 11 1 A0A0U1RRM2;G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 A0A0U1RRM2;G3V1Q4 SEPT7 Septin-7 1 S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR 114.5 9.482400000000001e-06 144503500.0 8994.32 9582.7 9042.99 9106.81 13106.029999999999 9023.210000000001 8959.8 9137.12 15329.600000000002 13325.5 13694.050000000001 True False 10512.341325988502 10070.41849897898 10325.421960421543 11337.978858820235 11178.150348452955 9978.040093077963 10587.679682470263 10432.33474125643 11857.470076340936 10315.260295038313 10293.439448446943 1.021266154878347 0.9783336803422288 1.0031070772927533 1.1014762281941524 1.0859490070774638 0.9693591867957637 1.028585220275203 1.0134935745729232 1.1519444142773845 1.0021198790453527 1.0 13.32943750426062 S(ph)PLAQMEEERR ddPTM_A549_PD325901_60min_R1 4 SPLAQMEEERR 11 1 A0A0U1RRM2;G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 A0A0U1RRM2;G3V1Q4 SEPT7 Septin-7 1 S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR 134.97 2.1648e-08 120853000.0 9277.43 8889.58 9625.400000000001 9561.55 11767.21 9685.43 10042.96 9432.62 10703.0 11011.51 12065.21 True False 10219.26786391701 9638.736104583724 10278.637526232249 10152.145227644398 10940.721764270704 9606.555069274085 10425.150338518584 9244.478994352758 10253.190130685094 10316.241379363946 10581.265657667718 0.9657888001811592 0.910924686745674 0.971399628246157 0.9594452644979802 1.0339709934739711 0.90788336481399 0.9852460637318935 0.8736647669037345 0.9689946800697813 0.9749534425391048 1.0 13.369224582505367 -9.645402362685632 1.4703744253958724 0.9927151630887764 0.9527920777077382 0.0900925750599203 0.04142987778220015 0.4795718768156562 2.097583945498429 0.009778654025708686 0.007299046152802699 2.2625471444277297e-10 9.645402362685632 -0.03992308538103817 S(ph)PLEATR ddPTM_A549_MK2206_60min_R1 1 SPLEATR 7 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(1)PLEATR 64.04 0.026075 5373100.0 921.15 935.57 848.91 761.25 2325.8 1263.8 1307.4 1142.1 2271.1 870.0 1208.9 True False 1076.6176000447304 983.1865168574365 969.2982029640025 947.7562841738107 1983.6779009686306 1397.534477157456 1544.9376567402862 1303.9961725345593 1756.6994762014597 673.4663957587585 908.696766057339 1.1847930357625984 1.081974266424755 1.0666904947506322 1.0429841060026477 2.182992143325687 1.537954716424369 1.7001685429601279 1.4350179523498785 1.9332075801517836 0.7411343595738764 1.0 9.827655134259912 S(ph)PLELEPEAK ddPTM_A549_MK2206_60min_R1 2 SPLELEPEAK 10 0 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(1)PLELEPEAK;S(1)PLELEPEAK 190.15 2.0666e-14 28905000.0 5109.2 5041.299999999999 5558.1 4628.2 7021.299999999999 5241.4 5875.5 5822.700000000001 7680.099999999999 7116.799999999999 7262.7 True False 5971.508052052904 5297.880636866715 6346.322156523339 5762.109207767791 5988.476071059866 5796.04146904026 6943.002296296129 6648.085556270888 5940.569612599546 5509.109937167738 5459.171149677092 1.0938488441429641 0.9704551280060312 1.1625065385427091 1.0554915846718997 1.0969570117643375 1.061707228098737 1.271805207408968 1.2177829516600007 1.0881816029803222 1.0091476867314555 1.0 12.414466212176867 -9.98760714288219 1.1338741430223482 1.013021805962336 1.1123473422837453 0.22011933334184908 0.07785494157647924 0.5087302662280149 1.3181128221604141 0.02670819276502536 0.015234543144204145 1.0289466489752742e-10 9.98760714288219 0.09932553632140939 S(ph)PLELEPEAK ddPTM_A549_PD325901_60min_R1 2 SPLELEPEAK 10 0 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(1)PLELEPEAK;S(1)PLELEPEAK 162.1 7.291800000000001e-09 36627000.0 21385.0 18956.4 20286.1 21963.0 25254.0 25423.0 22583.0 21285.0 24091.0 24963.0 25510.0 True False 23555.989457195057 20553.92235549158 21662.83673622913 23319.60462840793 23480.24616157035 25215.963516968794 23442.408422891764 20860.453977240526 23078.53904870921 23386.831919787775 22372.43172121361 1.0529025074578369 0.918716508407188 0.9682826170249683 1.0423366095825968 1.0495169436278269 1.127099808871422 1.0478256773788073 0.932417818375129 1.0315614921209513 1.0453415261789496 1.0 14.44943445496611 -6.251654329934576 24.028929618028098 1.0236171013280144 0.9738421348968915 0.14884226721126725 0.053126243223274666 618.1271558493243 1517913.4672320317 0.007401633022311799 0.019311037189523567 5.602033093696339e-07 6.251654329934576 -0.04977496643112289 S(ph)PLELGEK ddPTM_A549_MK2206_60min_R1 1 SPLELGEK 8 0 Q15742-2;Q15742-3;Q15742 Q15742-2 NAB2 NGFI-A-binding protein 2 1 S(1)PLELGEK 54.549 0.022719999999999997 1386700.0 829.58 936.96 652.29 722.82 1226.2 766.03 665.19 607.88 1260.3 1374.5 1478.9 True False 969.5928227162857 984.6472619202664 744.7945304112205 899.9109324486227 1045.8276043373176 847.0907861504392 786.0464126411744 694.0488515544237 974.8440622855439 1063.999495368292 1111.6483144364283 0.8722118408534983 0.8857542885939178 0.6699911480447021 0.8095284459679588 0.9407899879446316 0.76201328707082 0.7070999006009161 0.6243421076082728 0.8769356725735333 0.9571367864734335 1.0 10.118484728058343 -9.420808194933795 1.547535117701559 0.9661780320319153 0.7880662391694538 0.37469036508111064 0.09308400483816498 0.25819347464561315 1.2681160080814862 0.022533997711162476 0.01868906132223413 3.7948254548189064e-10 9.420808194933795 -0.17811179286246148 S(ph)PLELGEK ddPTM_A549_PD325901_60min_R1 1 SPLELGEK 8 0 Q15742-2;Q15742-3;Q15742 Q15742-2 NAB2 NGFI-A-binding protein 2 1 S(1)PLELGEK 79.148 0.0041486000000000006 2012300.0 1118.7 1144.3 1339.1 1401.3 1899.7 1579.0 1464.9 1816.5 1515.3 1681.9 2112.3 True False 1232.2696004565869 1240.734176921199 1429.9793786624552 1487.8551184167936 1766.2716256092185 1566.141147515782 1520.6475711240373 1780.268482483318 1451.6172105976946 1575.7045469651503 1852.5004909729314 0.6651925904804484 0.6697618613151172 0.7719184883516179 0.8031604448511501 0.9534527165936536 0.8454200984817263 0.8208621690164275 0.9610083728227908 0.7835988263815826 0.8505825259660751 1.0 10.855258209554394 -2.0372222095473767 0.12885521345925963 0.9905802480273043 5.168015151130204e-47 0.5173247180893663 0.07290525930522275 49.085483104520904 0.41578410876548105 0.2388972749981466 8.86971152632868 0.009178628459269268 2.0372222095473767 -0.9905802480273043 S(ph)PLGFYVHLK ddPTM_A549_MK2206_60min_R1 2 SPLGFYVHLK 10 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.999)PLGFY(0.001)VHLK;S(0.996)PLGFY(0.004)VHLK 90.61399999999999 0.00020235 4470300.0 1379.32 935.1800000000001 1068.6100000000001 1082.15 1526.45 1275.65 943.88 1144.6399999999999 1629.13 1562.37 1495.15 True False 1612.115494863699 982.776667523261 1220.1549665681437 1347.276798579559 1301.9112270760882 1410.6384362920626 1115.3707782193842 1306.8962253129819 1260.1346561860266 1209.42953188691 1123.8629909592441 1.4344413045292288 0.8744630577117212 1.0856794612719758 1.1987909642167554 1.158425215127758 1.2551694002202605 0.9924437295220375 1.1628608076127807 1.121252916345676 1.076136096317784 1.0 10.134250453395683 -10.629378542868103 0.46552870969381527 0.9700045161417159 1.1412215889824613 0.07239013840404185 0.13638747037179963 2.6832341888055162 0.7990747629162123 0.2118082269723326 0.03327643902575505 2.3475857093421228e-11 10.629378542868103 0.1712170728407454 S(ph)PLGFYVHLK ddPTM_A549_PD325901_60min_R1 2 SPLGFYVHLK 10 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(1)PLGFYVHLK;S(0.996)PLGFY(0.004)VHLK 91.961 0.00019368 12290600.0 1434.97 1564.96 1341.51 2090.89 1905.99 1765.94 1777.6000000000001 1366.75 1905.4499999999998 2178.6000000000004 1636.73 True False 1580.6470980309196 1696.8446714275985 1432.552935754962 2220.039526544274 1772.1198377085395 1751.5587701355414 1845.2475407400445 1339.4890990553668 1825.3705628808655 2041.0428241977988 1435.4225860863164 1.101171956852482 1.1821220370051793 0.9980008323965568 1.5466104184672318 1.2345631557465102 1.2202391038803222 1.2855082249828025 0.9331670770957334 1.2716607503423387 1.4219107627132352 1.0 10.487259811180047 -10.973237661680466 0.9292231233124685 0.983656578604052 1.2048140547435124 0.0 0.19767548337426033 0.9243880138415149 1.2319222482333776 0.15258145996434302 0.025967978186354053 1.0635608399064819e-11 10.973237661680466 0.22115747613946046 S(ph)PLGSVR ddPTM_A549_MK2206_60min_R1 2 SPLGSVR 7 0 Q92620;J3KSA8;H3BMS7;Q92620-2 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 S(1)PLGSVR;S(1)PLGSVR 96.66799999999999 0.011739 33292000.0 3256.5 3469.0 2948.0 2723.6 5150.6 3978.6 3314.3 3584.5 5532.9 4585.0 5377.5 True False 3806.117586219034 3645.5572827030005 3366.07072874378 3390.8821222670517 4392.953562958564 4399.61281121906 3916.465409005917 4092.613852070855 4279.706984225732 3549.245315579206 4042.1183385502027 0.9416145860747324 0.9018927644781826 0.8327491792214815 0.838887394742448 1.0867948919412875 1.088442356884851 0.9689140893412453 1.0124923392368477 1.0587782508516923 0.8780656621874715 1.0 11.980895843871169 -6.757392650269198 24.99997015255432 1.0307267002612057 0.8771481080719503 0.5005947484418396 0.06315050196763679 42.31176895615425 261390.6381842598 0.006639998351836244 0.013434249584146619 1.7482653485469543e-07 6.757392650269198 -0.1535785921892554 S(ph)PLGSVR ddPTM_A549_PD325901_60min_R1 2 SPLGSVR 7 0 Q92620;J3KSA8;H3BMS7;Q92620-2 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 S(1)PLGSVR;S(1)PLGSVR 103.8 0.0057477 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PLHIK ddPTM_A549_MK2206_60min_R1 1 SPLHIK 6 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(1)PLHIK 57.281000000000006 0.022574 1232000.0 126.0 265.91 201.88 204.61 266.53 370.6 202.91 261.11 357.25 335.09 258.68 True False 147.26571959576182 279.4436832065596 230.5096196468093 254.73945918529202 227.32379007015598 409.81664601563 239.77612049041733 298.123142115838 276.3334454110217 259.3929362698877 194.442616795196 0.757373676732992 1.4371524504882291 1.1854891867126138 1.310100961321694 1.169104766315675 2.1076482757238595 1.2331459247072907 1.5332191421279184 1.4211567914768415 1.3340333541340017 1.0 7.603200644833898 -4.060489261883436 16.32124902356753 1.2758322627809735 1.237765569487011 0.0 0.3269874216897238 0.0 0.0 0.042944678923968166 0.0 8.6998294349921e-05 4.060489261883436 -0.038066693293962395 S(ph)PLHIK ddPTM_A549_PD325901_60min_R1 1 SPLHIK 6 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(1)PLHIK 46.426 0.033964 3102300.0 537.71 444.48 287.3 390.42 595.03 426.84 429.01 437.46 448.47 407.53 579.45 True False 592.2979233588195 481.93788950269584 306.797905675247 414.5353566918468 553.2371455420607 423.36395655835105 445.3362103132799 428.7345171192691 429.62236549643495 381.79848625049493 508.18132343619084 1.1655247763807097 0.9483581298186173 0.6037173967763294 0.8157233207408446 1.0886609169365258 0.8330962533130366 0.8763332884845737 0.8436644507520998 0.8454115601719471 0.7513036560825813 1.0 8.989199544542 -10.866513714567635 1.1178298224735832 0.9999071635662876 0.8818063588527585 0.0 0.15769824331179158 1.0600368810271947 2.3546403155182922 0.09667927065424999 0.023510534407598652 1.3598352204258152e-11 10.866513714567635 -0.11810080471352913 S(ph)PLHIKDDVLPK ddPTM_A549_MK2206_60min_R1 2 SPLHIKDDVLPK 12 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK 99.344 0.00010486 36304000.0 2463.1 2444.3 2277.3999999999996 1641.4 3477.5 2530.8 2326.65 2805.1000000000004 3861.8999999999996 2969.1 3141.2 True False 2878.811062986675 2568.7044295505757 2600.36956500715 2043.5430736852452 2965.964356616393 2798.6075761909215 2749.3721883545886 3202.731515258465 2987.185816187054 2298.3782478704925 2361.1533472903557 1.2192393460129898 1.0879024153591736 1.1013132916552486 0.8654851138874152 1.2561506689178468 1.1852714180561739 1.1644191562186126 1.3564267305780453 1.265138420431324 0.9734133746578114 1.0 11.205276026436636 S(ph)PLHIKDDVLPK ddPTM_A549_PD325901_60min_R1 4 SPLHIKDDVLPK 12 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK 75.911 0.00033498 108621000.0 7185.59 6856.249999999999 7305.97 6775.7 7106.63 6513.03 6410.54 6714.12 7599.669999999999 8094.52 7717.02 True False 7915.0658070482195 7434.050249511463 7801.797058566602 7194.2196002688015 6607.48482534255 6459.990043068213 6654.496607682092 6580.201609474758 7280.282298464314 7583.430625780577 6767.875462220301 1.16950523856885 1.0984318921070415 1.1527690044117784 1.0629952694059521 0.9763011837654098 0.9545078184622678 0.9832474969181815 0.9722699015676074 1.0757116231089616 1.120503866850517 1.0 12.724487305884393 -6.4469123663705 4.0480753064047885 1.0178708188471266 1.135107898322749 0.5666562610368593 0.04882543962537503 0.13266214833932516 4.09220983036252 0.0066955300590326545 0.015979453508215224 3.5734493732860205e-07 6.4469123663705 0.11723707947562234 S(ph)PLHVGETR ddPTM_A549_MK2206_60min_R1 2 SPLHVGETR 9 0 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 S(1)PLHVGETR;S(0.999)PLHVGET(0.001)R 74.962 0.00064886 7387600.0 1114.1 1129.9 1020.22 1075.62 1300.76 1015.92 1123.55 1124.92 1661.9699999999998 1626.41 1123.45 True False 1302.132842870144 1187.4070838068953 1164.9025369331673 1339.1469482864172 1109.4199271063524 1123.423980086882 1327.6844915332329 1284.380854923015 1285.5364486207297 1259.0028514091975 844.4663593573638 1.5419594024575034 1.4061034766506368 1.3794540469553511 1.5857907582079454 1.3137526614448176 1.3303359780273594 1.5722171485239467 1.5209378570159087 1.52230628772355 1.490885738026669 1.0 9.721896141925141 -10.719872751602928 0.8895450890071761 0.9889229116651398 1.4617418265093656 0.0 0.16899492564836013 0.23064698409470946 0.3123635747303891 0.07265714185221839 0.01719541421208785 1.9060191002523163e-11 10.719872751602928 0.4728189148442258 S(ph)PLIESTANMDNNQSQK ddPTM_A549_MK2206_60min_R1 1 SPLIESTANMDNNQSQK 17 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(1)PLIESTANMDNNQSQK 155.92 2.0515999999999996e-41 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PLLLGAQR ddPTM_A549_MK2206_60min_R1 2 SPLLLGAQR 9 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 S(1)PLLLGAQR;S(1)PLLLGAQR 82.749 0.0014882 4073300.0 1349.0700000000002 1473.55 1307.37 1214.04 2017.87 1868.79 1448.88 1359.92 2523.5 1812.33 2376.2 True False 1576.7600344051932 1548.547400959068 1492.7747247753566 1511.479854500327 1721.0439960562264 2066.5441173975946 1712.1227413935048 1552.6928245803315 1951.9312792014366 1402.9233942821502 1786.1239602162696 0.8827830931814352 0.8669876422079714 0.8357621072361667 0.846234577311931 0.9635635792309941 1.1569992696068927 0.9585688225055755 0.8693085469791954 1.0928308016007413 0.785456903065272 1.0 10.802616494227236 -6.914931232257535 4.356309555969175 1.0313082138948155 0.8579618588293486 0.13061371856774695 0.1019408244458099 0.12816372037667678 4.535850990016345 0.010864485810889885 0.02100364578331015 1.2163785911373803e-07 6.914931232257535 -0.17334635506546692 S(ph)PLLLGAQR ddPTM_A549_PD325901_60min_R1 2 SPLLLGAQR 9 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 S(1)PLLLGAQR;S(1)PLLLGAQR 79.469 0.0017504999999999999 6549300.0 2283.5 2165.55 2209.41 2607.8999999999996 2624.3 2355.8 2152.16 2310.2 2728.0 2791.2 3019.6000000000004 True False 2515.319238976148 2348.0484984983873 2359.353848861635 2768.9840600293696 2439.978221343515 2336.6151458630006 2234.061626507141 2264.1212486831582 2613.3516468755442 2614.9631556508284 2648.2083428215064 0.9498192412973924 0.8866555023373588 0.8909245585820811 1.045606576814566 0.9213694337749367 0.8823381106689959 0.8436124871228534 0.8549634151030857 0.9868376307927402 0.9874461587356615 1.0 11.370800912597055 -8.870284123339356 8.219336733983246 0.9941747954734509 0.9099559825582223 0.3339202658679543 0.05161616237641579 0.20722260271087395 14.47747811521229 0.00940164773886899 0.009990968872205911 1.348080655184972e-09 8.870284123339356 -0.08421881291522859 S(ph)PLPAGPSSCTSPR ddPTM_A549_MK2206_60min_R1 2 SPLPAGPSSCTSPR 14 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PLPAGPSSCTSPR;S(1)PLPAGPSSCTSPR 82.925 0.00034586 23788000.0 7630.200000000001 8264.5 7362.4 6448.5 9841.5 7653.4 6914.0 8110.6 10235.6 10599.3 10939.9 True False 8917.991219520494 8685.127749466401 8406.4990275791 8028.382789484168 8393.828386956222 8463.277708084246 8170.184303734397 9260.302387670781 7917.252942894487 8204.91076846645 8223.220904120008 1.0844888302894056 1.0561710369613162 1.022287875468269 0.976306350406053 1.0207470387607775 1.0291925520137692 0.9935503860343776 1.1261162135424543 0.9627921996997278 0.9977733620600678 1.0 13.005487869839982 S(ph)PLPAGPSSCTSPR ddPTM_A549_PD325901_60min_R1 2 SPLPAGPSSCTSPR 14 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PLPAGPSSCTSPR;S(1)PLPAGPSSCTSPR 97.20299999999999 4.3367e-05 25406000.0 10332.2 11602.900000000001 10072.3 11133.2 12578.599999999999 11389.5 10990.400000000001 11647.400000000001 9961.7 11592.3 14641.4 True False 11381.117337836376 12580.717103381101 10755.866847660263 11820.872478668272 11695.122529814234 11296.74768817669 11408.645686177639 11415.083469791463 9543.04439174491 10860.360199645698 12840.600619481658 0.8863383945272026 0.9797607975045759 0.8376451512199162 0.9205856352804663 0.9107924836530221 0.8797678568896032 0.8884822466067928 0.8889836081711465 0.7431929918656826 0.8457828820848493 1.0 13.648425065692049 -7.286182996200929 6.625606977502621 0.8775983362975667 0.9079849031981859 0.059342370633654884 0.06399298216193473 0.7614781496022124 134.01471507897207 0.014082771615431757 0.022951579751749 5.173887768411005e-08 7.286182996200929 0.03038656690061925 S(ph)PLPAPPRPFLYR ddPTM_A549_MK2206_60min_R1 2 SPLPAPPRPFLYR 13 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PLPAPPRPFLYR;S(1)PLPAPPRPFLYR 106.42 2.5994000000000002e-05 72582000.0 4136.3 4912.200000000001 4214.6 3661.5 6914.4 5706.1 4974.9 5593.6 7689.200000000001 6002.8 6327.4 True False 4834.406317174205 5162.209998297405 4812.293654465241 4558.5676643709785 5897.300919450295 6309.9157145973695 5878.774933851348 6386.509929681558 5947.60847712926 4646.763310874338 4756.131952643895 1.0164575678954402 1.0853798947751596 1.0118082724324178 0.9584611423232083 1.2399363554604563 1.3266906337806164 1.2360411763982673 1.3427949420392657 1.2505137654608243 0.9770047082674483 1.0 12.215573025982874 -6.760077974639232 24.999953543755016 1.1702146899701855 1.0223934833583637 0.3447188781455558 0.11458063359135624 45.152283535149095 829117.1108161424 0.019564305704734313 0.03903690150214503 1.7374888463627594e-07 6.760077974639232 -0.14782120661182185 S(ph)PLPAPPRPFLYR ddPTM_A549_PD325901_60min_R1 2 SPLPAPPRPFLYR 13 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PLPAPPRPFLYR;S(1)PLPAPPRPFLYR 94.728 4.787e-05 89382000.0 2756.96 3475.3999999999996 3417.1 2827.7 3663.2 2836.3 3319.1000000000004 3105.5 3454.3 3793.8 3884.6 True False 3036.844549633318 3768.2841549173613 3649.0049546915684 3002.360606827352 3405.9094693539446 2813.2021131722695 3445.410166781212 3043.558366282378 3309.1277836518307 3554.2588205460415 3406.8188265082863 0.8914018338761612 1.1061005432976159 1.0710886432524218 0.8812797978765806 0.9997330773367618 0.825756301239997 1.011327676121973 0.8933725335203043 0.9713248494177834 1.0432779086726103 1.0 11.734209512094024 -6.233377993766094 24.861443422574574 0.9651507936233489 1.0311873521147352 0.11793083240909563 0.07922697974204582 1048.1982750983893 928667.497735452 0.009909473237494582 0.026212469267028006 5.842813260371536e-07 6.233377993766094 0.06603655849138634 S(ph)PLPTK ddPTM_A549_MK2206_60min_R1 1 SPLPTK 6 0 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 S(1)PLPTK 64.265 0.058846 33967000.0 3688.2 3219.6 3352.3 2875.8 5876.7 4304.7 3704.6 4161.6 5625.0 4715.4 4536.7 True False 4310.677992167369 3383.4638879765284 3827.7065481573145 3580.3711290995666 5012.245214817414 4760.2204967714 4377.677866880885 4751.519544365484 4350.946481279207 3650.187865012472 3410.1121834496907 1.2640868570507438 0.9921855076784586 1.1224576618723383 1.0499276670357633 1.469818277282302 1.3959131666911706 1.2837342677836476 1.393361651685845 1.2758954096570987 1.070401109596318 1.0 11.735603485449468 -4.0575024456104645 16.15801298597886 1.1851172168359878 1.183211115882118 0.0 0.1651200185751592 0.0 0.0 0.024330432284616763 0.0 8.759867847394961e-05 4.0575024456104645 -0.0019061009538698936 S(ph)PLPTK ddPTM_A549_PD325901_60min_R1 1 SPLPTK 6 0 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 S(1)PLPTK 69.423 0.052128 268650000.0 5633.0 5774.2 5344.5 5229.2 6697.5 5059.9 5409.3 5231.9 5123.2 5841.3 5773.9 True False 6204.858013204572 6260.812098556664 5707.209909089307 5552.195807625137 6227.09070512067 5018.6938520045005 5615.153871582535 5127.54565015385 4907.889720407913 5472.479321117503 5063.74690376775 1.2253491596485129 1.2363990968620926 1.1270725053107966 1.0964599758123672 1.2297397210921654 0.991102823142735 1.108893074297316 1.0125991183205918 0.9692209768138551 1.0807173867725557 1.0 12.305989582436988 -7.139887455192586 0.5555886581129125 0.982075453099257 1.2273862591840716 0.5666488629218509 0.06241994681379559 0.3822732201420064 0.21190764124348146 0.011844943437149105 0.04201293547157013 7.246237176314894e-08 7.139887455192586 0.2453108060848146 S(ph)PLPTKR ddPTM_A549_MK2206_60min_R1 2 SPLPTKR 7 1 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 S(1)PLPTKR;S(1)PLPTKR 83.78299999999999 0.0060033000000000005 44595000.0 5947.8 5798.9 6567.2 5428.6 9853.0 7551.7 7115.5 6778.9 10390.900000000001 7896.4 9805.8 True False 6951.643230251368 6094.039240895489 7498.5277102463115 6758.607243699114 8403.63675219017 8350.81588158724 8408.29424547615 7739.829834510573 8037.377740857621 6112.597755712025 7370.749233687696 0.9431392942360837 0.8267869449475965 1.017335887100135 0.9169498282222366 1.1401333142337424 1.1329670318208889 1.1407652029520146 1.0500736884570716 1.0904424348237391 0.8293048049680835 1.0 12.84759556080557 -6.743042727006886 24.988795075672616 1.0642997584959868 0.9254827091764563 0.3041208661290923 0.0929898504684244 162.45115450074812 220661.71672155277 0.009698150143384664 0.02015901991390079 1.8069963403232065e-07 6.743042727006886 -0.13881704931953054 S(ph)PLPTKR ddPTM_A549_PD325901_60min_R1 2 SPLPTKR 7 1 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 S(1)PLPTKR;S(1)PLPTKR 98.009 0.004838800000000001 94126000.0 9419.0 8951.4 9199.5 8689.9 10862.0 10041.1 9853.0 10265.400000000001 10343.5 10648.5 10497.7 True False 10375.209946098676 9705.765892941028 9823.833391087495 9226.655386805183 10099.090591865735 9959.32861071609 10227.961306768475 10060.648543949492 9908.79866549017 9976.151892715616 9206.549450403136 1.1269379480326764 1.0542240548673785 1.0670483490052107 1.0021838731774984 1.0969463256859515 1.081765613096228 1.1109440471555403 1.0927708147495974 1.076277134975502 1.0835929298439582 1.0 13.168444830386752 -10.497112227036855 0.8299156628189426 1.000210856869587 1.07717685676401 0.0 0.03923994708717731 0.4466143555336631 0.5558902039995566 0.020599097799282488 0.005987761843779042 3.18337479222051e-11 10.497112227036855 0.07696599989442299 S(ph)PLQDLR ddPTM_A549_MK2206_60min_R1 2 SPLQDLR 7 0 Q8NG31-4;Q8NG31-2;Q8NG31;E9PPJ1;Q8NG31-3;H0YN41 Q8NG31-4 CASC5 Protein CASC5 1 S(1)PLQDLR;S(1)PLQDLR 118.71 0.0068465 11598300.0 1675.56 1584.8600000000001 1816.0700000000002 1316.65 2062.1800000000003 1823.96 1466.9099999999999 1921.8500000000001 2400.3 2008.75 2074.9 True False 1958.3535644910673 1665.522604515618 2073.61603403993 1639.2293091066651 1758.836053753327 2016.97023655334 1733.4285590094028 2194.278122918782 1856.6358824914637 1554.9719798625356 1559.6450656732334 1.2556405348839599 1.0678856626886974 1.3295435478743602 1.051027150462005 1.1277155889273507 1.2932238757045011 1.111425026860938 1.4069086430069295 1.1904220539370167 0.9970037504599287 1.0 10.60700203153513 -10.396470367707945 0.9349607190852639 1.0088376372425978 1.19980047732527 0.34776449064744175 0.10697671140857397 0.4562582705587803 0.7627085626173217 0.051984021696746596 0.01874657467243506 4.013558821911257e-11 10.396470367707945 0.19096284008267217 S(ph)PLQDLR ddPTM_A549_PD325901_60min_R1 2 SPLQDLR 7 0 Q8NG31-4;Q8NG31-2;Q8NG31;E9PPJ1;Q8NG31-3;H0YN41 Q8NG31-4 CASC5 Protein CASC5 1 S(1)PLQDLR;S(1)PLQDLR 90.26299999999999 0.012551999999999999 18396700.0 2884.6 3211.9 2879.0 2827.4 3603.5 2736.3 2608.6 3328.1000000000004 2828.5 3506.5 3391.2 True False 3177.442468469717 3482.578085164029 3074.3862528334043 3002.0420765087038 3350.4025914001268 2714.016480017374 2707.871700480693 3261.718434656058 2709.6279813737083 3285.0989915769665 2974.1038985879873 1.0683696927932709 1.170967190089576 1.0337185107396645 1.0093938136909006 1.1265250662529962 0.9125493165541073 0.910483222111476 1.096706283934674 0.9110737465023182 1.1045676625946492 1.0 11.538239332644007 -6.743346997994548 0.893073247203829 0.9627035073784149 1.1086333151105234 0.12476489224189691 0.0818570642737638 0.5047881830101361 0.7420276403835957 0.011711672060538919 0.0432521496709059 1.8057307842878423e-07 6.743346997994548 0.1459298077321085 S(ph)PLQSVVVR ddPTM_A549_PD325901_60min_R1 2 SPLQSVVVR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(1)PLQSVVVR;S(1)PLQSVVVR 86.014 0.0012272000000000001 7912400.0 1820.15 1637.73 1780.15 1713.2199999999998 1735.0700000000002 2031.85 1554.49 1640.95 1814.0700000000002 2043.5 2100.2799999999997 True False 2004.9302880763894 1775.7472547139357 1900.9616839115604 1819.0417083950756 1613.204668866552 2015.3032872577198 1613.646967599568 1608.219964949628 1737.8309464983565 1914.4730612541082 1841.9588747718733 1.088477226900465 0.964053692530927 1.0320326419594978 0.9875582638186555 0.8758092761796039 1.0941087311231719 0.8760494002882764 0.8731030789972476 0.9434689179548522 1.0393679725836527 1.0 10.847025135545728 -6.520083309154356 24.93233068836779 0.9601163119011127 1.0197779504594962 0.15611697907145483 0.07123828388598537 162.79106746281485 1451921.41107067 0.009405803078447097 0.019862985583707304 3.019372469443784e-07 6.520083309154356 0.05966163855838347 S(ph)PLRNPLQAK ddPTM_A549_PD325901_60min_R1 2 SPLRNPLQAK 10 1 F5H212;P15822;C9JZF8;C9JAW2;C9J2N3 F5H212 HIVEP1 Zinc finger protein 40 1 S(1)PLRNPLQAK;S(1)PLRNPLQAK 74.76 0.00044398 9503700.0 2513.1 2342.5299999999997 2633.3999999999996 2410.48 2725.3 2716.19 2457.87 2714.7 2721.83 3393.8999999999996 3156.6000000000004 True False 2768.2280619535604 2539.943224209749 2812.1183599206274 2559.3698750027224 2533.884329774598 2694.0702491899233 2551.4055878480713 2660.5531788590497 2607.440950518792 3179.6085747934035 2768.358211336058 0.9999529867984697 0.9174908123555037 1.0158072565917868 0.9245082029205772 0.9153021886397068 0.9731653361035666 0.9216313038538168 0.9610581347328676 0.94187267378971 1.148553883588233 1.0 11.434814917044857 -10.776407329596003 0.9198186186491065 1.001368127083956 0.9507347484484416 0.2707278337112804 0.05557986475069632 0.6601905978972641 0.9475421194706749 0.023064070783429327 0.005228633335688119 1.67337266505958e-11 10.776407329596003 -0.050633378635514426 S(ph)PLRVK ddPTM_A549_MK2206_60min_R1 1 SPLRVK 6 1 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 1 S(1)PLRVK 47.067 0.030157 1875900.0 584.29 708.43 823.71 677.25 1367.0 785.17 835.67 636.37 1306.8 1189.2 1115.0 True False 682.9038674810131 744.4860610508177 940.5244640344431 843.1762804029074 1165.9161108539508 868.2561682463354 987.5004219123107 726.5773963013893 1010.8118865307862 920.5588940647307 838.1147275654995 0.8148095302711925 0.888286575291848 1.1221905940806178 1.0060392123786088 1.3911175552786517 1.0359633826843597 1.1782401495088113 0.8669187790219407 1.2060543184426862 1.0983685929714058 1.0 9.711003934368412 -5.67398793566185 3.95657484024134 1.1000297544881523 0.8301992196574235 0.3631631020939785 0.12823055493933505 0.17357697619953028 5.005049052287309 0.017602933675998023 0.07695291623173908 2.118419982369751e-06 5.67398793566185 -0.26983053483072883 S(ph)PLSALAR ddPTM_A549_MK2206_60min_R1 2 SPLSALAR 8 0 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(1)PLSALAR;S(1)PLSALAR 129.63 0.0010683 45828000.0 1857.29 2265.35 1832.8899999999999 1554.3899999999999 3299.7 2282.5 2052.84 2399.1 3321.9 2424.6000000000004 2991.2 True False 2170.7551456191454 2380.646638907824 2092.8213629603747 1935.215619779218 2814.3185010861594 2524.0326349991215 2425.814455608635 2739.179771935609 2569.4949539842487 1876.881176042167 2248.4024870797516 0.9654655508047159 1.0588169389546587 0.9308037039571828 0.8607069378813471 1.2516969347162683 1.1225893270903473 1.0789057873527386 1.218278216500856 1.1428091583911808 0.8347620974569725 1.0 11.134684600531552 -6.746175056996154 24.999912377998154 1.0962451872177557 0.9597857517100186 0.2579771590539699 0.11295727942190903 225.20998761353113 368846.89246909344 0.01335793742016134 0.027725720248224832 1.7940103448691096e-07 6.746175056996154 -0.1364594355077371 S(ph)PLSALAR ddPTM_A549_PD325901_60min_R1 2 SPLSALAR 8 0 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(1)PLSALAR;S(1)PLSALAR 139.02 0.0010918 69894000.0 5248.1 5709.9 4878.1 5664.8 5794.2 5380.1 4691.4 5132.1 5046.4 6655.4 5618.3 True False 5780.88324855298 6191.093311895794 5209.157200398269 6014.7018303057575 5387.235380904846 5336.286249366469 4869.933794232584 5029.736239445437 4834.317357328715 6235.176908182327 4927.284717338082 1.173239132744098 1.256491895041225 1.0572064532963432 1.2206929729758222 1.093347693497048 1.083007489010975 0.9883605420844278 1.0207926937420215 0.9811321315201789 1.265438728604833 1.0 12.266577123152823 -7.2964600910151205 1.0960657573466408 0.9912130569856602 1.1806848129096252 0.1274661700406432 0.096203197969148 0.1661098437348817 0.3938429413565347 0.007429307679163595 0.01593994760721502 5.0528907575704844e-08 7.2964600910151205 0.18947175592396504 S(ph)PLSGIPVR ddPTM_A549_MK2206_60min_R1 2 SPLSGIPVR 9 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 S(0.999)PLS(0.001)GIPVR;S(1)PLSGIPVR 116.13 0.00019579 52252000.0 3671.4 3700.8 2926.3 2533.0 4761.9 3623.7 3942.7 3647.9 5839.1 4627.9 4564.9 True False 4291.042562887935 3889.1549126051495 3341.2933424433227 3153.5851137106915 4061.4308180507846 4007.157528782616 4659.037554864561 4165.000996225214 4516.553173126656 3582.45417578386 3431.309345169285 1.2505554385322362 1.1334317373863232 0.973766281710307 0.9190617331399796 1.1836387831859598 1.1678217046865884 1.357801668748903 1.2138226482228558 1.316276884066199 1.0440487334164033 1.0 11.744543480689881 S(ph)PLSGIPVR ddPTM_A549_PD325901_60min_R1 4 SPLSGIPVR 9 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 S(0.999)PLS(0.001)GIPVR;S(1)PLSGIPVR;S(1)PLSGIPVR;S(1)PLSGIPVR 130.53 4.9433999999999995e-05 77615300.0 7639.800000000001 6906.499999999999 7409.4 7727.199999999999 8718.800000000001 8057.2 7632.1 7081.300000000001 7386.699999999999 8850.5 8721.099999999999 True False 8415.386871876492 7488.534993363855 7912.246440341719 8204.491594255516 8106.421566227123 7991.584834556145 7922.543741945374 6940.057916327618 7076.262686941194 8291.677919564223 7648.459987607842 1.1002720659467706 0.9790905627403295 1.0344888321519976 1.0726985049995117 1.05987631227218 1.0448619522759144 1.0358351556759933 0.9073797767880085 0.9251879068997247 1.08409770502801 1.0 12.900953576009618 -8.134519798092418 6.911974079135744 0.9594683305246924 1.045826570088008 0.25553371752112075 0.05183019856697916 0.15857177402564326 8.302070780117356 0.006583235252674904 0.008518704543523391 7.336352695772599e-09 8.134519798092418 0.08635823956331568 S(ph)PLSPTETFSWPDVR ddPTM_A549_MK2206_60min_R1 1 SPLSPTETFSWPDVR 15 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.981)PLS(0.005)PT(0.011)ET(0.002)FS(0.002)WPDVR 58.831 0.0077785 2071300.0 903.79 897.18 820.71 599.52 1427.3 1302.2 1043.2 989.32 1571.0 1543.9 1405.0 True False 1056.3276564559806 942.8426298343841 937.0990189237812 746.4024269134751 1217.3460607328768 1439.9979396695985 1232.7359366004803 1129.5591396654324 1215.1710083714906 1195.1319177148814 1056.09972397267 1.0002158247731123 0.8927590912416365 0.887320579347137 0.7067537373324705 1.1526809761427221 1.3635056491188544 1.1672533460792585 1.0695572719368152 1.150621461958584 1.1316468422311692 1.0 10.044530354669034 -6.781678685612838 24.99561602544173 1.107124908127828 0.8743733410949857 0.5815923951717256 0.10922897009957629 165.33891787436315 204193.82048520923 0.017941831274136556 0.03393597802209981 1.65318446054736e-07 6.781678685612838 -0.2327515670328424 S(ph)PLSPTETFSWPDVR ddPTM_A549_PD325901_60min_R1 2 SPLSPTETFSWPDVR 15 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(1)PLSPTETFSWPDVR;S(1)PLSPTETFSWPDVR 148.7 8.036100000000001e-14 12535800.0 6435.299999999999 6451.4 6566.9 7121.700000000001 7566.5 8123.1 6754.2 8041.9 8881.8 8364.7 8757.3 True False 7088.606918582532 6995.082119190272 7012.569323977655 7561.591234445788 7035.055143007923 8056.948166805219 7011.234777040058 7881.497995751491 8508.528833291499 7836.551414471368 7680.207617098546 0.922970741416036 0.9107933623587245 0.9130702805957329 0.9845555760252261 0.9159980424677178 1.049053432991568 0.9128965161606902 1.0262089762006967 1.1078514094265957 1.0203567149701465 1.0 12.906929596143662 -7.694902094440999 0.8870326226956959 1.0492332184487285 0.9257460686284039 0.4466447792517101 0.04831081583165997 0.3637408722877183 0.5764861342700216 0.01044342459921035 0.019193710999854376 2.0188214271721788e-08 7.694902094440999 -0.1234871498203246 S(ph)PLTGYVR ddPTM_A549_MK2206_60min_R1 2 SPLTGYVR 8 0 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 S(1)PLTGYVR;S(1)PLTGYVR 155.42 0.00042106 78815000.0 3007.6 3916.4 3564.8999999999996 3205.0 4557.1 3217.7 3470.8 3773.1 4922.4 4320.8 4669.0 True False 3515.209351239785 4115.728031703094 4070.4564249995565 3990.225143877917 3886.756626753865 3558.1948782636064 4101.399433237102 4307.948479634131 3807.484259457563 3344.728279074075 3509.5584421554418 1.0016101481646429 1.1727196168801692 1.1598201004738453 1.1369593097379131 1.1074773909069775 1.0138582778744936 1.168636881487055 1.2274901673922112 1.0848898293652993 0.9530339312485892 1.0 11.777073812802934 -9.79639991868837 1.0511115728479152 1.013696746960472 1.1229921684456796 0.3788446802616582 0.06708211086830283 0.38202964768274494 0.8646700114306511 0.020331940410530137 0.012609317321184114 1.5980857586777786e-10 9.79639991868837 0.10929542148520754 S(ph)PLTGYVR ddPTM_A549_PD325901_60min_R1 4 SPLTGYVR 8 0 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 S(1)PLTGYVR;S(1)PLTGYVR;S(0.998)PLT(0.002)GYVR;S(1)PLTGYVR 129.63 0.0010683 125927000.0 6154.5599999999995 6052.719999999999 6150.21 5786.499999999999 7212.0 6615.299999999999 6664.4 6693.48 7318.2 7695.1 6798.1 True False 6779.366400452391 6562.80395642269 6567.600234817132 6143.918962905006 6705.454000049318 6561.427190095721 6918.017388899608 6559.973290466517 7010.641503726023 7209.230072746019 5961.9767967064745 1.1371004335671786 1.1007765008492025 1.101580978719209 1.030517087268612 1.124703136005755 1.100545576380035 1.1603563087869229 1.100301714372721 1.1758921147762356 1.2092012965781005 1.0 12.541575045207264 -10.998334437982844 1.2816836338270143 1.0001227328771176 1.1188463569804459 0.0 0.07123273301327027 0.2739291250075626 0.802264492767135 0.0281378855271487 0.006447679016739672 1.003842461671649e-11 10.998334437982844 0.11872362410332826 S(ph)PLYLVSR ddPTM_A549_MK2206_60min_R1 2 SPLYLVSR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 S(1)PLYLVSR;S(1)PLYLVSR 77.66199999999999 0.0044251 6865600.0 886.6500000000001 963.54 1048.76 783.72 1674.17 1295.54 1078.85 1391.26 1829.24 967.6199999999999 1475.76 True False 1036.294843488748 1012.580070387907 1197.4899380859313 975.7314351825274 1427.901810759588 1432.6331828901493 1274.8630801394047 1588.4753655550576 1414.9200606960326 749.0339699587237 1109.2880630960203 0.9341981383955864 0.9128197661857087 1.0795121465056965 0.8796014918426719 1.2872236331240394 1.2914888661937582 1.1492624166361847 1.4319773360957537 1.2755208568160321 0.675238465893315 1.0 10.115418341987665 -6.75672301540561 24.99988037790627 1.1790761703381902 0.9579090283328858 0.20647696104642532 0.19257049657712436 108.93787856640259 577436.514719912 0.02144134671228731 0.04351343593333643 1.7509630628552612e-07 6.75672301540561 -0.2211671420053044 S(ph)PLYLVSR ddPTM_A549_PD325901_60min_R1 2 SPLYLVSR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 S(0.998)PLY(0.001)LVS(0.001)R;S(1)PLYLVSR 83.883 0.0032673000000000003 8134000.0 1622.25 1362.29 1474.58 1484.6399999999999 1703.46 1105.44 1323.09 1221.37 1488.52 1671.96 1678.33 True False 1786.939625762669 1477.0949592571708 1574.6538661698787 1576.3428409379217 1583.8148462179709 1096.4376631474643 1373.4409139726276 1197.0088172037713 1425.962680867735 1566.392160261522 1471.9060498104438 1.2140310354677841 1.0035252993541233 1.0698059610344473 1.0709534356088335 1.0760298501537777 0.7449100866788791 0.9331036543735269 0.8132372425250411 0.9687864799872072 1.064193030841368 1.0 10.523469873313667 -7.05635054904185 24.999975517093272 0.9495837931230526 1.0809547972252054 0.4105156594556749 0.09569271539932891 261.8560592204274 116172.21880273777 0.013708555570859992 0.02374396736314816 8.783132833807756e-08 7.05635054904185 0.13137100410215274 S(ph)PMLER ddPTM_A549_MK2206_60min_R1 1 SPMLER 6 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PMLER 58.246 0.024897 12384000.0 1456.0 1812.8 1398.5 1764.2 3129.0 2305.8 1934.6 2248.7 3438.9 2329.9 2724.7 True False 1701.737204217692 1905.0637769051605 1596.8283290868978 2196.429079197949 2668.728244961236 2549.798225533835 2286.0917781319868 2567.460111354927 2659.994640794857 1803.5739718141751 2048.081792105577 0.8308931854074941 0.9301697736136878 0.7796701944433784 1.0724323060066172 1.303037923215747 1.2449689438000704 1.1162111722997734 1.253592567079751 1.2987736383614783 0.8806161837706541 1.0 11.000057616557044 -6.425643498031008 4.666610384883389 1.1688764927666313 0.8579690656271215 0.5321933937953194 0.1262118849169292 0.12962986343346183 4.66379616082264 0.01767722452516574 0.041943952794239174 3.7528093499848547e-07 6.425643498031008 -0.3109074271395098 S(ph)PMLER ddPTM_A549_PD325901_60min_R1 1 SPMLER 6 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PMLER 52.299 0.032070999999999995 11675000.0 1487.0 1504.0 1451.8 1189.1 1490.7 1229.5 1488.3 1202.0 1318.0 1884.9 1511.6 True False 1637.9591453284577 1630.7473582884593 1550.3278783826102 1262.54800635796 1385.998374635818 1219.4873596394252 1544.9380709290103 1178.0251670492423 1262.6090434684622 1765.8870923209527 1325.6827828218927 1.235558888259711 1.2301188334189541 1.1694561462754538 0.9523756532995459 1.0454977560208902 0.9198937901596517 1.165390462143895 0.888617686156909 0.9524216953175105 1.332058555186201 1.0 10.372519884848874 -6.140664380924446 3.5659180850219006 0.983439288240117 1.228149667450208 0.23453324324045266 0.12595098201496616 0.09575158591231739 2.2084235950523774 0.00902432899543013 0.02629247555603614 7.23328569825689e-07 6.140664380924446 0.24471037921009098 S(ph)PMVER ddPTM_A549_MK2206_60min_R1 3 SPMVER 6 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PMVER;S(1)PMVER;S(1)PMVER 91.064 0.016184999999999998 208293000.0 5336.469999999999 5501.0 4595.25 3479.8100000000004 6660.4 4962.35 3981.94 4824.21 6671.0 7352.9 7346.5 True False 6237.135671834878 5780.977403329266 5246.925548256396 4332.363606214609 5680.663982978527 5487.462583258665 4705.406954933776 5508.056541023506 5160.029151397977 5691.874783189166 5522.161296914748 1.1294736492611306 1.04686862489133 0.9501579664447456 0.784541300638052 1.028703016362875 0.9937164614015406 0.8520951674415422 0.9974457906727349 0.9344220268033288 1.03073316354762 1.0 12.431017312910503 -5.546191807972251 3.0968284513461595 0.955075073948364 1.1219488849735848 0.36881982264939284 0.07189893466862188 0.1983006100040913 3.62597124280583 0.009323188414233817 0.057823673472246755 2.843205116693923e-06 5.546191807972251 0.1668738110252208 S(ph)PMVER ddPTM_A549_PD325901_60min_R1 4 SPMVER 6 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(1)PMVER;S(1)PMVER;S(1)PMVER;S(1)PMVER 74.486 0.038869 298505000.0 4898.71 5193.21 4726.42 4556.969999999999 5939.7 4829.2 4457.9 4760.1900000000005 5229.08 5649.4400000000005 5508.24 True False 5396.0234329603 5630.8600322720795 5047.183283472333 4838.443687270234 5522.515962852593 4789.87259631616 4627.547823956482 4665.244276153186 5009.31995221553 5292.733394260539 4830.761399610255 1.1170130309883761 1.165625781626552 1.0448007810693236 1.001590285055395 1.143197832809161 0.9915357435584805 0.9579334272915719 0.9657368456512004 1.0369628176253296 1.0956313004172709 1.0 12.238034881770739 -5.8453147757251855 0.7488635391938483 1.0104079849392866 1.17420825610116 0.3567314333383096 0.055451913607539385 0.9841222599733378 0.6155492065341617 0.008123915455298142 0.11371491475122181 1.4278586744126301e-06 5.8453147757251855 0.16380027116187335 S(ph)PNELVDDLFK ddPTM_A549_PD325901_60min_R1 2 SPNELVDDLFK 11 0 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 S(1)PNELVDDLFK;S(1)PNELVDDLFK 155.98 3.5745e-13 23614100.0 7044.3 8294.4 7547.400000000001 7676.9 7941.7 9554.3 8709.0 9496.5 9041.8 9263.0 9393.6 True False 7759.432150260423 8993.398197199333 8059.611950203134 8151.0846774951 7383.902389377655 9476.492948518062 9040.425760747656 9307.08485763987 8661.804589706477 8678.132599166533 8238.246750936582 0.9418790653943786 1.091664096632806 0.9783164056462452 0.989419827291338 0.8962953663093669 1.1503045775414178 1.0973725398210337 1.1297409678317507 1.051413589757037 1.0533955660140846 1.0 13.008121622936873 -7.254089221804322 24.953938792400493 1.047600258075328 0.9862291534849564 0.3271985807128006 0.06276276273260431 826.3924447813517 2805615.139668181 0.010097645456766996 0.017249879865451186 5.5707129200527766e-08 7.254089221804322 -0.06137110459037165 S(ph)PNLAGK ddPTM_A549_MK2206_60min_R1 2 SPNLAGK 7 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(1)PNLAGK;S(1)PNLAGK 78.49600000000001 0.016747 65829000.0 7916.1 7985.1 7386.3 6569.6 10851.2 7837.6 8603.2 8387.3 12152.900000000001 11011.900000000001 11379.7 True False 9252.144149936588 8391.507482880292 8433.788406960704 8179.152294920546 9255.002854497718 8666.969629822184 10166.290078375434 9576.225460028987 9400.287554193439 8524.304141903307 8553.80642625751 1.0816405806817653 0.9810261145401875 0.9859690512836031 0.9562003028047382 1.081974783306734 1.013229572651691 1.1885106549954303 1.1195279601643744 1.0989595842778832 0.9965509759183186 1.0 13.062350843870927 -6.77507477813797 24.906627294536385 1.063697494906968 0.9986788023260862 0.22928847754555526 0.06071252725652731 291.01766495290684 531577.1020127024 0.009498925451400955 0.018020105659372926 1.6785149814513604e-07 6.77507477813797 -0.06501869258088178 S(ph)PNLAGK ddPTM_A549_PD325901_60min_R1 2 SPNLAGK 7 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(1)PNLAGK;S(1)PNLAGK 92.538 0.012263 87621000.0 15983.5 15666.199999999999 16473.3 15358.599999999999 17754.3 16058.3 15454.0 16636.0 17591.199999999997 18036.0 18647.0 True False 17606.133153569197 16986.445654533676 17591.27720000017 16307.265840088616 16507.299217009913 15927.526528912393 16042.110426753285 16304.181929310462 16851.903039045836 16897.203881956975 16353.53721307214 1.0765948017347462 1.0387016235824273 1.075686377252907 0.9971705587371924 1.0094023697707957 0.9739499364199191 0.9809566100433661 0.9969819811384765 1.0304744973200861 1.0332445917847215 1.0 13.997315098931795 -6.264528168537955 24.99771942129042 1.0068788605862808 1.0611650043184635 0.6534910654491737 0.0195578914313727 144.5941811422721 1170214.4858984337 0.0029523789834511012 0.007123058239010624 5.438408568107082e-07 6.264528168537955 0.05428614373218266 S(ph)PNREWEGK ddPTM_A549_MK2206_60min_R1 2 SPNREWEGK 9 1 H0Y459 H0Y459 NCOR1 1 S(1)PNREWEGK;S(1)PNREWEGK 57.019 0.0040043 10236700.0 5333.299999999999 5491.7 4476.5 4750.3 7563.0 6287.2 5268.2 6629.4 8068.0 7629.4 6922.3 True False 6233.430653333936 5771.204073052774 5111.335012626026 5914.123713249072 6450.492718645517 6952.50733089441 6225.363747314652 7569.137751686025 6240.610881948566 5905.913241151574 5203.301864239156 1.1979759806315615 1.1091426604934553 0.9823252899768908 1.136609765790295 1.239692196791033 1.3361722060903396 1.1964256369786734 1.4546797301357046 1.1993559176027333 1.1350318307959932 1.0 12.345211690882731 -4.02993116560747 16.10793884912823 1.1470959471142566 1.1422843747551545 0.0 0.13388173999542144 0.0 0.0 0.020141606980897092 0.0 9.334022305698563e-05 4.02993116560747 -0.004811572359102012 S(ph)PNREWEGK ddPTM_A549_PD325901_60min_R1 1 SPNREWEGK 9 1 H0Y459 H0Y459 NCOR1 1 S(1)PNREWEGK 48.004 0.0092662 6935300.0 1907.0 1138.2 905.41 1221.9 1491.6 1241.9 1382.9 1334.7 1738.5 1826.0 2344.5 True False 2100.5972361407976 1234.1201085132468 966.8565672726261 1297.3739878637562 1386.8351617406486 1231.7863781506328 1435.527016251917 1308.0783614481059 1665.4368907966025 1710.7060483728903 2056.141363010007 1.0216210198046458 0.6002117027141585 0.47022864510504014 0.6309750930570828 0.6744843456241968 0.5990766978917286 0.6981655260076253 0.6361811424936251 0.8099817068796048 0.8319982658529712 1.0 11.005723740197094 -9.411746100789134 0.7367576356728656 0.9741981724564204 0.6484385899879197 0.30776623283739213 0.13708435291202173 0.33937379451718974 0.4004857855335599 0.044439162737278604 0.029884078097419074 3.8748411143588095e-10 9.411746100789134 -0.3257595824685007 S(ph)PNREWEVLQPAPHQVITNLPEGVR ddPTM_A549_MK2206_60min_R1 1 SPNREWEVLQPAPHQVITNLPEGVR 25 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(1)PNREWEVLQPAPHQVITNLPEGVR 55.985 0.0015612 3204000.0 1441.4 1559.0 1456.4 1252.9 1638.8 1357.3 1238.7 1105.6 2137.7 1768.3 1848.1 True False 1684.6730811534221 1638.3464409726093 1662.939419722672 1559.8605562448192 1397.7346909052326 1500.9285850971787 1463.755756007491 1262.3221857579977 1653.514363205434 1368.8398018623125 1389.1657650347984 1.2127228611275354 1.1793743282548925 1.1970777437644498 1.1228757542882184 1.006168396951691 1.0804531920347034 1.0536940895392886 0.9086908254799791 1.1902930556052205 0.9853682233725528 1.0 10.44000304677812 -6.439859282424997 3.763399935310442 1.0693172649599016 1.193895092136506 0.4560185096014866 0.07231747101777575 0.23248025284518062 6.15820561913577 0.012066157805874727 0.029098355723453997 3.6319571627308336e-07 6.439859282424997 0.12457782717660426 S(ph)PNREWEVLQPAPHQVITNLPEGVR ddPTM_A549_PD325901_60min_R1 3 SPNREWEVLQPAPHQVITNLPEGVR 25 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR 104.1 3.2607e-12 22804900.0 3822.1 4011.5000000000005 3554.0 3534.9 3918.5200000000004 3514.4 3517.2000000000003 3819.1 4527.5 4348.6 4625.7 True False 4210.116778318694 4349.563183360473 3795.1958119381425 3753.242744659621 3643.2966733601274 3485.779891595608 3651.0489706856893 3742.925054474008 4337.224919805359 4074.0286538632827 4056.768224728256 1.0378006691769308 1.0721744360073295 0.9355219725899833 0.9251804729147506 0.8980785865833326 0.859250442346655 0.8999895405486854 0.9226371454151115 1.0691330338685763 1.0042547240016855 1.0 11.98611516408893 -8.754604143111717 24.997432242694725 1.0326461558150852 0.9414031694119691 0.2556167851099934 0.060743766166234496 156.59397245746408 572685.8905748437 0.011654809821291572 0.013069949001717983 1.7595266815663812e-09 8.754604143111717 -0.09124298640311612 S(ph)PNVFR ddPTM_A549_MK2206_60min_R1 2 SPNVFR 6 0 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(1)PNVFR;S(1)PNVFR 87.181 0.038958 8742400.0 2074.88 2165.86 2003.16 1818.29 2621.6 2350.6 1882.72 2359.21 3053.9 2905.1 3190.8 True False 2425.069018054399 2276.093022863973 2287.238209291177 2263.771131626139 2235.96611281252 2599.3389317980013 2224.785853677583 2693.635242277608 2362.1965260761913 2248.8358923204255 2398.4362983999986 1.0111042013799436 0.9489904002796985 0.9536372555806456 0.943852931652304 0.9322599538308093 1.0837640063786664 0.9275984753740351 1.123079751617559 0.9848902502234548 0.9376258580728737 1.0 11.227878407252208 S(ph)PNVFR ddPTM_A549_PD325901_60min_R1 2 SPNVFR 6 0 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(1)PNVFR;S(1)PNVFR 88.294 0.038482999999999996 14417200.0 2765.8 3628.1000000000004 3899.1 3236.1 3749.7 2747.1000000000004 3613.6 3989.4 3917.8999999999996 3669.2 3933.2000000000003 True False 3046.581979925655 3933.852719818057 4163.716373193023 3435.9865472836586 3486.334007762746 2724.728528398103 3751.117525437795 3909.8282873762428 3753.2442878642564 3437.5260858104098 3449.4413346090687 0.8832102605597523 1.1404318375699778 1.207069774289959 0.9960994300177206 1.0106952603552128 0.7899042958232834 1.0874565361648383 1.133467106150785 1.0880730888816865 0.9965457453416846 1.0 11.752147009146128 -14.999530659277003 0.003049612455182599 0.4068471109013925 1.645661849916509 0.0 0.11470146777785986 1434645.8180755945 340.71459526768797 72374.57082362579 66162.04936329507 1.0010812811156754e-15 14.999530659277003 1.2388147390151165 S(ph)PPADAIPK ddPTM_A549_MK2206_60min_R1 2 SPPADAIPK 9 0 M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754;P18754-2 M0R1Q8 RCC1 Regulator of chromosome condensation 1 S(1)PPADAIPK;S(1)PPADAIPK 100.88 0.00075677 44979000.0 12701.7 14736.1 13553.9 11740.5 19098.5 15392.400000000001 14022.5 14410.3 21191.3 19077.9 19408.1 True False 14845.436433249906 15486.10454702788 15476.046828466857 14616.923027051065 16289.135949629976 17021.21355135182 16570.20673982 16453.004154692884 16391.504385552365 14768.189139823002 14588.53313368967 1.0176099472925735 1.0615258165514547 1.0608363902418418 1.0019460416685646 1.1165712001580925 1.16675291445473 1.135837756131492 1.1278038719806271 1.1235882480671786 1.012314878026938 1.0 13.832547208169117 -6.764039865138171 24.99995150319827 1.0826130799983507 1.0391512024189111 0.21806841407473776 0.05167432034927135 136.6628712025463 1313845.0681795052 0.009425731249738693 0.01841382805305298 1.7217105269767332e-07 6.764039865138171 -0.043461877579439534 S(ph)PPADAIPK ddPTM_A549_PD325901_60min_R1 2 SPPADAIPK 9 0 M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754;P18754-2 M0R1Q8 RCC1 Regulator of chromosome condensation 1 S(1)PPADAIPK;S(1)PPADAIPK 104.79 0.00059487 86219000.0 10669.9 12368.8 12922.0 12268.2 12549.1 13518.099999999999 13424.5 12426.8 13373.7 14564.1 16780.4 True False 11753.100393234776 13411.16218430737 13798.96462629844 13025.97885089626 11667.694508044764 13408.013075511777 13935.376693668271 12178.93772536399 12811.64989729452 13644.52024047515 14716.517179719824 0.7986332805312931 0.9113000053292972 0.9376515148104593 0.885126466528832 0.7928298771752527 0.9110860206780964 0.9469208321159026 0.8275692935110518 0.8705626297878198 0.9271568859565533 1.0 13.845148662216946 -10.66333034387207 0.7881750062656747 1.0055594123697524 0.8777218133552904 0.2467504003333798 0.05359453020855964 0.5215213022615824 0.5385264909459788 0.04137992472427551 0.009350322400004461 2.171049153228354e-11 10.66333034387207 -0.127837599014462 S(ph)PPAPGLQPMR ddPTM_A549_MK2206_60min_R1 6 SPPAPGLQPMR 11 0 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR 102.4 0.00023121 227096000.0 26122.5 29102.4 25592.299999999996 24307.8 39704.1 29972.699999999997 26393.7 28253.4 46055.7 37097.899999999994 41131.0 True False 30531.33936619277 30583.587853599274 29221.672968530987 30263.212091218607 33863.67948570323 33144.39121973198 31189.093644413428 32258.40597240866 35624.157485840136 28717.45862438947 30917.037542149406 0.9875247369535062 0.9892146947101403 0.9451640678280667 0.9788522606656788 1.0953080300638975 1.07204292049476 1.0087995527350615 1.043386059496501 1.1522500316297601 0.9288554437092741 1.0 14.916114466987949 -6.747855348100909 23.02448459411259 1.067756510702239 0.974046042215446 0.16565700334317157 0.058106439234797566 76.29720317898703 129318.65408928003 0.008243450516852128 0.017066530528085617 1.7870827052811905e-07 6.747855348100909 -0.0937104684867931 S(ph)PPAPGLQPMR ddPTM_A549_PD325901_60min_R1 3 SPPAPGLQPMR 11 0 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR 115.29 2.1266999999999998e-05 202733000.0 22073.2 22816.5 23491.6 24723.3 27056.2 25393.9 26891.7 26293.5 29196.1 29921.2 30207.7 True False 24314.05501456899 24739.3265295137 25085.881242466538 26250.402090311803 25155.865850822833 25187.100497720716 27915.078359202893 25769.055515648273 27969.089449172676 28031.970325616057 26492.344402387473 0.9177766469160736 0.9338292660608853 0.9469105814661618 0.9908674631281833 0.9495522732429752 0.950731279767406 1.0537035882972745 0.9726981925135317 1.0557423316092827 1.058115880566985 1.0 14.693287898154674 -7.746059883804763 24.951757646239646 1.0239833053652925 0.9495528039916253 0.6515017269789356 0.02897420791388443 124.21389032618278 201524.5189471604 0.004597603396429034 0.0068049835625299225 1.7944861724595958e-08 7.746059883804763 -0.07443050137366714 S(ph)PPASPESWK ddPTM_A549_MK2206_60min_R1 1 SPPASPESWK 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 S(0.786)PPAS(0.212)PES(0.002)WK 92.611 0.00061644 6125800.0 2698.8 3637.0 2903.6 1981.2 4973.2 4275.8 3523.7 3847.6 5311.8 5151.5 5775.9 True False 3154.291460674936 3822.107765116986 3315.3741411059827 2466.5940889394487 4241.6488679582035 4728.262317953671 4163.910678488414 4393.009082780815 4108.685781201583 3987.772572127867 4341.584623269571 0.7265299963909247 0.8803485585957838 0.763632274570116 0.5681322150717173 0.9769817327121202 1.089063724017177 0.9590762451504737 1.011844629086722 0.9463562587678883 0.9185062409597226 1.0 12.08400598882448 -6.849027151801161 10.818996425236993 0.9849300748761771 0.7472780592176306 0.6992168482197314 0.07913993627999183 0.16948285095788942 19.736511933786726 0.010905245613280988 0.020623914766813033 1.415705268241732e-07 6.849027151801161 -0.23765201565854654 S(ph)PPAVVEEK ddPTM_A549_MK2206_60min_R1 2 SPPAVVEEK 9 0 Q5T7W0-2;Q5T7W0-4;Q5T7W0 Q5T7W0-2 ZNF618 Zinc finger protein 618 1 S(1)PPAVVEEK;S(1)PPAVVEEK 123.67 9.727600000000001e-05 35474000.0 12724.9 13793.2 13482.2 11653.5 19479.2 16672.7 14741.2 14032.8 21532.6 18502.5 18880.6 True False 14872.552026064353 14495.214964479408 15394.178690322044 14508.608023145496 16613.83548394021 18436.994047557455 17419.485226816527 16021.992373647625 16655.500480496474 14322.77239945567 14192.025941949034 1.0479512993351998 1.0213633362685874 1.0847062113112171 1.0223070393537474 1.1706457944691848 1.2991093817733994 1.2274135699912803 1.1289432840091946 1.1735815977665218 1.009212670413755 1.0 13.792792931440792 -6.748203133080663 24.976434862531253 1.1203513688987268 1.0453609370253087 0.21543184859065745 0.08439730259059171 429.34433094217025 810156.0170161999 0.01470929413034288 0.0304743597622524 1.785652174255448e-07 6.748203133080663 -0.07499043187341803 S(ph)PPAVVEEK ddPTM_A549_PD325901_60min_R1 2 SPPAVVEEK 9 0 Q5T7W0-2;Q5T7W0-4;Q5T7W0 Q5T7W0-2 ZNF618 Zinc finger protein 618 1 S(1)PPAVVEEK;S(1)PPAVVEEK 99.75200000000001 0.00079716 46840000.0 7625.9 7836.1 7312.8 7459.1 9140.5 7915.6 7399.4 7892.200000000001 7879.3 7961.2 9335.400000000001 True False 8400.075754109132 8496.475647795342 7809.090583438732 7919.831666154793 8498.502813013136 7851.137978008816 7680.988216107044 7734.783879688876 7548.16042200384 7458.528473333106 8187.204981976384 1.0260004204855466 1.037774877568083 0.9538164246076595 0.9673425404139512 1.0380224791882033 0.9589521693047385 0.9381697701494289 0.9447404696372591 0.9219459435327 0.9109981354751209 1.0 12.99915530101383 -7.3523901904109845 12.381992693430464 0.9583927789103555 1.0015397225261888 0.4009930732030359 0.03383192813304837 1.0636662358060907 142.11642286225424 0.0057087790377126114 0.009126549673999658 4.4423196940888866e-08 7.3523901904109845 0.04314694361583338 S(ph)PPEGDTTLFLSR ddPTM_A549_MK2206_60min_R1 1 SPPEGDTTLFLSR 13 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(1)PPEGDTTLFLSR 50.675 0.027774 2258200.0 466.11 614.2 569.53 582.12 738.6 810.3 577.67 596.58 1067.5 991.53 1099.5 True False 544.7779727046072 645.46015653969 650.2979179584278 724.7394261323594 629.952918417504 896.045408166392 682.6251615184041 681.1470419496251 825.7129544472097 767.5426843525078 826.4638053437378 0.659167369680547 0.7809902289323295 0.7868437961272361 0.8769161110823603 0.7622268686715177 1.0841919541699885 0.825958931419254 0.8241704446649379 0.9990914896796771 0.9287069553315478 1.0 9.690807828415714 -3.456844313097952 0.20920276801888466 1.02534695196937 6.833841966112994e-18 0.48489268725808565 0.08594062525015833 12.91544230569884 0.2485956365024373 0.061569335764806755 3.9237147694923604 0.0003492654985524281 3.456844313097952 -1.02534695196937 S(ph)PPEGDTTLFLSR ddPTM_A549_PD325901_60min_R1 2 SPPEGDTTLFLSR 13 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR 131.08 4.0114e-08 30543000.0 7922.5 8226.4 7337.5 8222.8 9808.3 8601.900000000001 8373.8 7729.200000000001 8838.7 9122.1 9134.5 True False 8726.786367763758 8919.667598553306 7835.466873971899 8730.703680666247 9119.39884479807 8531.84897835086 8692.469541319182 7575.035042559901 8467.24017640721 8546.129049212674 8011.014408366357 1.0893484798441855 1.1134254844477611 0.9780867284159265 1.0898374707138558 1.138357563715547 1.0650148087913267 1.0850647743488193 0.9455775082177934 1.0569498124437762 1.0667973634259684 1.0 12.967769222584177 S(ph)PPGAAASAAAKPPPLSAK ddPTM_A549_MK2206_60min_R1 2 SPPGAAASAAAKPPPLSAK 19 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 S(0.999)PPGAAAS(0.001)AAAKPPPLSAK;S(1)PPGAAASAAAKPPPLSAK 109.68 2.1472e-10 32526000.0 8222.4 9086.4 9729.4 8105.2 14704.099999999999 11650.3 9584.5 10852.5 17319.7 12483.8 12477.3 True False 9610.140101620565 9548.858948847672 11109.175219891351 10090.97436385626 12541.146368403488 12883.127013156749 11325.879586222487 12390.875109387354 13396.8156038776 9663.70090962435 9378.842054038576 1.0246616849126264 1.0181277063660419 1.1844932621621114 1.0759296622882177 1.3371742797399182 1.3736372719497083 1.2075989254287 1.321151911717266 1.428408275423389 1.030372497366358 1.0 13.195194098019071 -6.010233523144379 1.370866569804129 1.2337191413149282 1.0091759468573263 0.25223336774636607 0.13307854867410185 0.6903215759853527 2.2246236827090313 0.024985421036474675 0.14509061337387752 9.767118949966597e-07 6.010233523144379 -0.22454319445760196 S(ph)PPGAAASAAAKPPPLSAK ddPTM_A549_PD325901_60min_R1 4 SPPGAAASAAAKPPPLSAK 19 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 S(0.995)PPGAAAS(0.005)AAAKPPPLSAK;S(1)PPGAAASAAAKPPPLSAK;S(1)PPGAAASAAAKPPPLSAK;S(1)PPGAAASAAAKPPPLSAK 109.68 2.1472e-10 42338900.0 17267.800000000003 16562.9 17436.0 16347.7 22065.0 17233.8 16680.9 17432.1 20391.6 20098.9 21661.199999999997 True False 19020.814344117505 17958.713710502616 18619.311811185555 17357.460300679533 20515.230520117606 17093.453646648177 17315.70077763872 17084.403090282107 19534.61196569917 18829.85202390028 18997.009721660223 1.001253072078504 0.9453442396266318 0.9801180335216642 0.9136943421621093 1.0799189357010395 0.8997970679121342 0.9114961265664624 0.899320647859785 1.0282993087815278 0.9912008415951195 1.0 14.213484724461079 -8.78976498305329 24.999273706493998 1.0133635706528157 0.9541065142710324 0.16863477844674202 0.051431856829239356 229.5570020515964 202598.63636786933 0.008629979449829621 0.00918816284892719 1.62268797175404e-09 8.78976498305329 -0.059257056381783246 S(ph)PPGSGASTPVGPWDQAVQR ddPTM_A549_MK2206_60min_R1 2 SPPGSGASTPVGPWDQAVQR 20 0 Q8TE77;C9JUG3;Q8TE77-4;Q8TE77-2 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 S(1)PPGSGASTPVGPWDQAVQR;S(0.998)PPGS(0.002)GASTPVGPWDQAVQR 135.27 4.79e-17 12470500.0 2308.8999999999996 2933.3 2681.2 2764.0 3977.7 3028.8 2659.0 2963.8999999999996 4989.1 4096.9 4562.7 True False 2698.5858728147173 3082.5924408627034 3061.434476902244 3441.1801240806753 3392.5855992273277 3349.305605645279 3142.1058813465074 3384.0419015630687 3859.0768159555732 3171.407444579375 3429.6556658861923 0.7868387195999826 0.8988052274531149 0.8926361055290362 1.0033602376789932 0.9891913153184473 0.9765719745453946 0.9161578267463231 0.9867001912825154 1.125208240098477 0.9247014142336389 1.0 11.743848023143226 -3.4296900513276234 0.3244273513123787 1.0526303258823206 5.353804572298142e-10 0.4096776461088528 0.06290020569631323 10.321331940368589 0.2969592117638745 0.01963033495651725 5.5134167107913 0.00037180048218771834 3.4296900513276234 -1.0526303253469402 S(ph)PPKADEKER ddPTM_A549_MK2206_60min_R1 2 SPPKADEKER 10 2 E9PG73;Q13427;C9JM79;Q13427-2 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)PPKADEKER;S(1)PPKADEKER 69.979 0.00068599 100027000.0 6649.4 7020.6 6758.6 6239.4 7019.1 4695.4 4770.9 5407.3 7159.4 9820.599999999999 10425.2 True False 7771.656157778239 7377.91855259288 7717.071108306548 7768.053280097305 5986.599688145544 5192.264111445729 5637.710774470119 6173.801334161741 5537.80733121251 7602.119639297079 7836.33511911735 0.9917462742014029 0.9415011533381048 0.9847806392914658 0.9912865085550686 0.7639540164050371 0.6625883187127611 0.7194320672576247 0.7878429444779961 0.706683321608158 0.9701116049454184 1.0 12.935963380117347 -6.7519518105502625 24.955952824850577 0.8209925990130822 0.9753018557031784 0.4111402066432015 0.09948219541168653 224.48133897353088 590467.6048506688 0.018554698732186944 0.038224742636009626 1.770305381051063e-07 6.7519518105502625 0.1543092566900962 S(ph)PPKADEKER ddPTM_A549_PD325901_60min_R1 3 SPPKADEKER 10 2 E9PG73;Q13427;C9JM79;Q13427-2 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)PPKADEKER;S(1)PPKADEKER;S(1)PPKADEKER 62.042 0.001484 167091000.0 11200.8 12050.099999999999 12658.0 11835.3 13901.8 13505.2 13894.099999999999 14057.599999999999 12459.6 14759.3 14578.5 True False 12337.896970406842 13065.604216829628 13517.04799873748 12566.339601083484 12925.38552660643 13395.218128834791 14422.847578643255 13777.21014002613 11935.966341426145 13827.395279162103 12785.436920725695 0.9649961160425129 1.0219130013186934 1.0572222195102159 0.9828635250401927 1.0109459384726909 1.0476934196218681 1.1280684162825327 1.0775705379057272 0.9335595189615675 1.081495717737057 1.0 13.642213842639269 -8.76401333602599 24.999998353305262 0.9686253288242715 1.0374175345650978 0.0 0.0559573864808039 63.989162021738345 621504.6120831368 0.008584682350431751 0.009345777272883675 1.7218157018032645e-09 8.76401333602599 0.06879220574082623 S(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_A549_MK2206_60min_R1 2 SPPKVPIVIQDDSLPAGPPPQIR 23 1 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR 130.57 1.5349e-22 24547000.0 2085.9 3178.3 2803.8 2536.9 3698.7 3214.7 3048.6 2809.7 4577.9 4143.5 4209.5 True False 2437.948924641267 3340.061894383092 3201.421000424629 3158.440613885768 3154.6261296382613 3554.8774202548448 3602.4911582824207 3207.983579345372 3541.0129594041064 3207.4804722142694 3164.1649737102875 0.7704872991443734 1.0555903128105701 1.0117743629121383 0.9981908782025967 0.996985351853876 1.123480428419764 1.1385282335826357 1.0138483947579078 1.1190987160356334 1.0136893932092266 1.0 11.62760910588524 -5.261198302531075 23.03011414046067 1.053777794760144 0.77048706302847 0.693960387593294 0.052643109060545874 2.9825107909665065 284352.2998877503 0.00805854248723917 0.06481579621996206 5.4802667417144225e-06 5.261198302531075 -0.2832907317316741 S(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_A549_PD325901_60min_R1 2 SPPKVPIVIQDDSLPAGPPPQIR 23 1 Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422 Q7Z422-2 SZRD1 SUZ domain-containing protein 1 1 S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR 202.03 2.0608e-61 46962000.0 4416.200000000001 4746.700000000001 4489.4 5619.0 5949.0 5295.5 5931.8 5740.1 5604.0 5647.9 6461.6 True False 4864.52937296539 5146.721067545101 4794.077680955287 5966.072868325107 5531.162762935856 5252.37520371743 6157.537895005508 5625.609202478665 5368.483368434947 5291.290630123356 5666.864163457227 0.8584164420834909 0.9082132408843909 0.8459842238446259 1.0527996959583623 0.9760535286170364 0.9268574386496453 1.0865864642940255 0.9927199664949454 0.9473464006872816 0.9337246275010866 1.0 12.468334905663372 -6.248361050330305 24.984654885953713 0.9846339985778696 0.8746054908236068 0.5498946717767345 0.04762256712332005 460.1866459580709 879132.5773195119 0.006295570866722336 0.016546758680921834 5.644675101335604e-07 6.248361050330305 -0.11002850775426276 S(ph)PPLGLISR ddPTM_A549_MK2206_60min_R1 2 SPPLGLISR 9 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 S(1)PPLGLISR;S(1)PPLGLISR 47.082 0.035162 6734000.0 812.05 999.5899999999999 673.73 590.71 1114.65 767.44 930.46 797.25 1231.69 1229.51 1247.18 True False 949.1041872836377 1050.4648614059074 769.2750448020844 735.4339765179797 950.686461567927 848.6499914145569 1099.5125379306774 910.2626289757268 952.7141816047629 951.7628370682193 937.4707855830853 1.0124093485145957 1.12053077019626 0.8205856189146342 0.78448735451586 1.0140971603468387 0.9052548671015024 1.1728499221944348 0.9709770618713887 1.0162601291219935 1.015245329993131 1.0 9.872629922242744 S(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A549_MK2206_60min_R1 1 SPPLIGSESAYESFLSADDKASGR 24 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.997)PPLIGS(0.002)ES(0.001)AY(0.001)ESFLSADDKASGR 82.089 3.6705000000000003e-06 6882700.0 687.51 726.53 954.0 785.39 1271.5 999.94 829.83 710.78 1684.5 1240.7 1244.4 True False 803.544879994303 763.5072737394671 1089.2915451904896 977.810585257497 1084.4640343458655 1105.7529870935475 980.5993695064953 811.5352416724578 1302.9634395937474 960.4250082964268 935.3811363071825 0.859056109648138 0.816252588494289 1.1645429899205946 1.0453605993358204 1.1593819805125123 1.1821416363590362 1.0483420409543762 0.8675984688726358 1.3929759635069758 1.0267739758876426 1.0 9.869410524207765 -5.761795873564565 24.999985721784608 1.1463082637584665 0.8376542556879342 0.3160192783404344 0.13372632324119185 7.393503103384781 518697.2269140095 0.022631107494911897 0.07740380437701991 1.7306295959867863e-06 5.761795873564565 -0.30865400807053234 S(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A549_PD325901_60min_R1 2 SPPLIGSESAYESFLSADDKASGR 24 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)PPLIGSESAYESFLSADDKASGR;S(1)PPLIGSESAYESFLSADDKASGR 83.088 2.9126e-06 30788000.0 2268.1 2375.0 2053.0 2476.2 2620.9 2239.66 2430.8 2838.6 2339.3 2821.0 2803.2 True False 2498.355842313029 2575.149585063224 2192.3289256918993 2629.1492501417733 2436.8170256141507 2221.420951516905 2523.3054241847994 2781.9818961613805 2240.9873561348822 2642.8815785651277 2458.424170948884 1.0162427915556707 1.0474797699655254 0.8917618658320142 1.0694449237891257 0.9912109775074358 0.9035954729730378 1.026391399011861 1.1316118386061964 0.9115543943215962 1.0750307492889026 1.0 11.263518141190087 S(ph)PPLMAK ddPTM_A549_MK2206_60min_R1 2 SPPLMAK 7 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(1)PPLMAK;S(1)PPLMAK 60.151 0.028999 30849000.0 8757.400000000001 9156.3 8496.9 8122.2 13460.900000000001 10520.099999999999 10549.7 10447.0 13823.2 11933.7 12662.2 True False 10235.435022126389 9622.316560280622 9701.888186927756 10112.13936461941 11480.819441546404 11633.329999322796 12466.443932471318 11927.894242595688 10692.267271114444 9237.868881685401 9517.826281058182 1.075396284810992 1.0109783763788998 1.0193386494388832 1.0624421024308874 1.2062438525900452 1.2222675278781632 1.3097994819763943 1.253216216641176 1.123393824952822 0.970585993996346 1.0 13.216416407395096 -6.5340993679486825 24.51782934298257 1.1157340634445352 1.0341582341249564 0.16435560781757685 0.10139151850202203 340.90845618056704 744906.8816001591 0.01723482128833108 0.035902076385100685 2.923483399081835e-07 6.5340993679486825 -0.08157582931957874 S(ph)PPLMAK ddPTM_A549_PD325901_60min_R1 2 SPPLMAK 7 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(1)PPLMAK;S(1)PPLMAK 57.708 0.034517 58080000.0 15738.900000000001 16000.0 15756.1 16012.1 18742.2 16656.0 17135.5 17297.2 17360.8 20655.6 19333.6 True False 17336.701541634207 17348.376152004883 16825.40369512621 17001.13105088243 17425.81252907991 16520.359058279195 17787.600829405394 16952.19377660911 16631.185949808256 19351.401890893245 16955.68976578813 1.0224710277853073 1.0231595642312992 0.9923160854874331 1.0026800021539666 1.0277265490101357 0.9743253908556813 1.049063829021915 0.9997938161627565 0.9808616564432174 1.1412925193959962 1.0 14.049481854649486 -8.516894729624939 24.95243507578645 0.9909290417469352 1.0122961632430403 0.0 0.049117450110886175 296.09330352801834 1234666.0607738558 0.0030372488994765408 0.0035009486027895585 3.041622207290682e-09 8.516894729624939 0.02136712149610509 S(ph)PPLPAVIR ddPTM_A549_MK2206_60min_R1 2 SPPLPAVIR 9 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(1)PPLPAVIR;S(1)PPLPAVIR 86.882 0.0011628 176317000.0 2790.0 2920.0 3312.5 2668.3 4040.4 2892.0 2879.4 3271.5 4776.0 4355.8 3869.1000000000004 True False 3260.8837910490124 3068.615527671595 3782.2623096892003 3322.0336197845404 3446.062512285516 3198.0295204457657 3402.5497084426984 3735.245143548558 3694.2436257048025 3371.8217547655167 2908.2956882723533 1.121235300866574 1.055125013610455 1.3005081721714544 1.1422613021023198 1.184907891649978 1.099623237534532 1.169946275464154 1.2843416020629754 1.270243476480665 1.1593806531991653 1.0 11.505958241098996 -10.96112952013667 1.253858259004867 1.0010056952554542 1.188580158736699 0.07062920348966828 0.08723405108105535 0.34319915158153863 0.967739838072242 0.05419268332338781 0.012866309771318784 1.0936301630667084e-11 10.96112952013667 0.18757446348124485 S(ph)PPLPAVIR ddPTM_A549_PD325901_60min_R1 4 SPPLPAVIR 9 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR 74.165 0.0021744 302178000.0 4332.67 4446.71 3812.04 4801.41 5587.700000000001 3639.3900000000003 3820.1499999999996 4151.93 4072.85 5420.28 5001.49 True False 4772.519468856927 4821.449857430103 4070.7479580587174 5097.982190906712 5195.239228518521 3609.752014475911 3965.5278987162924 4069.116499023924 3901.6822782173977 5078.0425957692305 4386.338437057338 1.0880417772912814 1.0991969558702517 0.9280514981852744 1.162240958845573 1.1844136751116383 0.822953373588196 0.9040633675719391 0.927679557201193 0.8895078057029541 1.1576951182945967 1.0 12.098801415102088 -7.258357036480407 24.998745943217415 0.9334785904655177 1.0875179981647713 0.32553248673275414 0.10012938704447354 188.029788370166 1524976.8164128175 0.0118833307223479 0.02003706387021596 5.5162375913338135e-08 7.258357036480407 0.15403940769925362 S(ph)PPLPQK ddPTM_A549_MK2206_60min_R1 2 SPPLPQK 7 0 Q9NQS3-3 Q9NQS3-3 PVRL3 Nectin-3 1 S(1)PPLPQK;S(1)PPLPQK 67.563 0.023427 62979000.0 10092.7 10291.3 10248.400000000001 9662.900000000001 18363.5 14287.599999999999 12622.5 14122.0 18936.0 14318.5 13351.3 True False 11796.101017175757 10815.08321230366 11701.777224035874 12030.310933784063 15662.253475981344 15799.504348658696 14915.844861713531 16123.836746811176 14647.026234578327 11083.940905369867 10035.803732865703 1.1754017247811805 1.0776499322008397 1.166002996423133 1.1987391597134027 1.5606376821310175 1.5743138037781435 1.486263109437508 1.6066313347687449 1.4594771504559803 1.1044397838383067 1.0 13.292868541340809 -6.5363128664983 24.831128901750056 1.3218650302661012 1.1416295985153622 0.2185977271023547 0.1917615202234936 400.5984902027782 740450.0062502258 0.03622116630276806 0.07543090398546735 2.9086209875231067e-07 6.5363128664983 -0.18023543175073908 S(ph)PPLSPVGTTPVK ddPTM_A549_MK2206_60min_R1 2 SPPLSPVGTTPVK 13 0 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 1 S(1)PPLSPVGTTPVK;S(1)PPLSPVGTTPVK 80.763 0.00065983 4816700.0 3237.3 3906.6 4239.8 3462.6 5096.4 3981.1000000000004 3008.6000000000004 3264.8999999999996 6147.700000000001 5325.7 5262.7 True False 3783.6770956139653 4105.42925356228 4841.067393394804 4310.937155442021 4346.726311160259 4402.377359559697 3555.2236760508113 3727.7095733369047 4755.255765859593 4122.62067114071 3955.826346869017 0.9564821010428566 1.0378183705691912 1.2237815740386184 1.0897690589613647 1.0988162598696056 1.1128843820568917 0.8987309766174956 0.9423339768914114 1.202089108290437 1.0421642179525168 1.0 11.949763380625217 -11.358250200932883 2.0271808820813164 0.9993612855859992 1.0881730178026183 0.0 0.10028572418366473 0.7532733109075571 5.5951879988150255 0.08565489260295586 0.016193348203923204 4.382781290808014e-12 11.358250200932883 0.08881173221661909 S(ph)PPPESMDTPTSTR ddPTM_A549_MK2206_60min_R1 1 SPPPESMDTPTSTR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.992)PPPES(0.005)MDT(0.002)PT(0.001)STR 41.621 0.032504000000000005 2538300.0 258.43 415.6 307.44 402.23 470.36 455.33 315.16 429.21 509.68 357.0 475.6 True False 302.04666599311685 436.75226482887524 351.0396149406332 500.7763680567909 401.17066708212417 503.5127183764079 372.42049250288255 490.0518319004976 394.23829379171315 276.35345205273177 357.4953941077593 0.8448966643247755 1.221700396781128 0.9819416437986888 1.400791104754325 1.1221701697258788 1.4084453301365747 1.0417490648582297 1.3707920157225355 1.1027786659340246 0.7730266084754954 1.0 8.481780844419038 -9.424630941717396 1.586211860247103 1.0283899573608943 1.1783070518537877 0.1861785857653716 0.18667135800454746 0.4806355192109273 2.4768009675544693 0.035689603263238584 0.02965856316330458 3.7615692218415666e-10 9.424630941717396 0.14991709449289337 S(ph)PPPESVDTPTSTK ddPTM_A549_MK2206_60min_R1 2 SPPPESVDTPTSTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)PPPESVDTPTSTK;S(1)PPPESVDTPTSTK 128.76 1.1298e-08 16118600.0 8507.4 8807.2 7551.7 7774.4 12504.3 10089.9 9194.3 10324.2 12410.4 11681.2 10680.0 True False 9943.241134039556 9255.448861407287 8622.644614061868 9679.128349006083 10664.934034346044 11157.606520866444 10864.7852970531 11787.68696653647 9599.464215336438 9042.408807054268 8027.861246995102 1.2385915536048155 1.1529158983498478 1.0740898912882182 1.2056920331836907 1.3284900805103004 1.3898604095882738 1.3533847886471484 1.4683471230832126 1.1957685764598387 1.1263783128338098 1.0 12.970799966135662 -9.873800082040386 1.059013760441342 1.02998008126633 1.2678667695318915 0.3208875749882758 0.1119527725133603 0.3344888901710897 0.763855609063651 0.03984163699146888 0.023640648269711836 1.3372109306746036e-10 9.873800082040386 0.23788668826556147 S(ph)PPPESVDTPTSTK ddPTM_A549_PD325901_60min_R1 1 SPPPESVDTPTSTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)PPPESVDTPTSTK 97.214 4.3327e-05 10162000.0 7067.7 6346.7 6365.7 6343.0 8026.6 6466.2 6576.3 6685.9 7540.9 7625.6 8081.7 True False 7785.207701034259 6881.558682745585 6797.714682063766 6734.7927040018 7462.8393062667565 6413.541411061774 6826.56469518944 6552.544479512915 7223.982197186136 7144.118314606963 7087.70213411729 1.0984106772150404 0.970915333704641 0.9590858297137456 0.9502082023993744 1.0529278975119043 0.9048830339793227 0.963156262214965 0.9244949005364734 1.0192276792238275 1.0079597279092907 1.0 12.791102259511344 S(ph)PPPETIK ddPTM_A549_MK2206_60min_R1 2 SPPPETIK 8 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(1)PPPETIK;S(1)PPPETIK 80.755 0.0038494999999999996 50089000.0 5844.299999999999 6153.5 5283.200000000001 5001.9 7325.799999999999 6119.799999999999 5572.0 5496.6 8215.7 8116.4 8367.4 True False 6830.674960583416 6466.686866276423 6032.4372028830185 6227.3657245438235 6248.184524428581 6767.39317400553 6584.360274863762 6275.759882631517 6354.8570677769985 6282.899602915388 6289.543651508126 1.086036656879794 1.0281647166445567 0.9591216051798198 0.9901140797473609 0.9934241449982422 1.0759752295196845 1.0468740881200411 0.9978084628010645 1.0103844443870282 0.9989436358246524 1.0 12.618739628381881 S(ph)PPPETIK ddPTM_A549_PD325901_60min_R1 2 SPPPETIK 8 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(1)PPPETIK;S(1)PPPETIK 75.38 0.0048501 99567000.0 10367.900000000001 10874.4 9780.7 9947.2 11920.099999999999 11318.8 11175.2 10550.9 11490.2 12557.2 14175.2 True False 11420.441575555427 11790.82385171011 10444.477118127004 10561.615952269703 11082.873298112567 11226.623445536183 11600.47835130409 10340.454022479069 11007.306852246833 11764.336248974838 12431.74026399636 0.9186518808336303 0.948445157421571 0.8401460210985359 0.8495685823534509 0.8914981380531046 0.9030612936830474 0.9331339060308641 0.8317784801558412 0.8854196289899301 0.946314514231415 1.0 13.601740646535214 -10.586379114527562 0.8166698499831103 1.0021290580178996 0.8884485595457229 0.38771066096360707 0.038624995975539436 0.3875057693258683 0.45006220358079646 0.02706458352197782 0.006974512602133522 2.5919157783454298e-11 10.586379114527562 -0.11368049847217676 S(ph)PPPRSPPPR ddPTM_A549_MK2206_60min_R1 1 SPPPRSPPPR 10 1 Q96HA1 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.924)PPPRS(0.076)PPPR 44.863 0.014538999999999998 4093800.0 844.12 945.83 938.01 778.79 915.06 589.67 714.47 606.8 867.84 1582.0 1259.8 True False 986.5868192474167 993.9687070334332 1071.0339227506615 969.5935849612115 780.4558861726521 652.0684880087327 844.279950750522 692.8157582470628 671.2756256557062 1224.6251012532825 946.9568912888037 1.0418497698503222 1.049645148767698 1.1310271170770927 1.0239046717761346 0.8241725609182223 0.6885936350505573 0.891571684537256 0.7316233343042089 0.7088766466888512 1.2932215948991868 1.0 9.88715494055872 -6.691205662204188 4.523367536126564 0.8360368186253654 1.0717242874010342 0.20702477696794996 0.16329993208750726 0.151680266714252 5.952744617195472 0.01747202883679525 0.03687531941215423 2.0360776551751095e-07 6.691205662204188 0.23568746877566882 S(ph)PPPTVDESADNAFHLGPLR ddPTM_A549_MK2206_60min_R1 2 SPPPTVDESADNAFHLGPLR 20 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 S(0.49)PPPT(0.49)VDES(0.02)ADNAFHLGPLR;S(0.828)PPPT(0.143)VDES(0.029)ADNAFHLGPLR 52.784 0.0034356 1461800.0 709.51 416.16 528.08 469.35 642.14 576.52 590.38 652.02 1086.5 1133.1 830.78 True False 829.2579421459442 437.3407664369218 602.9696846794487 584.3407710699223 547.6820566377144 637.5269637369968 697.6444039974994 744.445831727505 840.4094847839751 877.1319230278729 624.4743976384448 1.3279294479996664 0.7003341819789565 0.9655634994159573 0.9357321505568611 0.8770288401075631 1.0209016833162616 1.1171705463598818 1.1921158570195232 1.345786933719181 1.404592288082418 1.0 9.286498614839015 -7.720758500293335 2.6064115224707307 1.169224245790957 0.9458400299750443 0.3162900668520632 0.17282840415556341 0.29358392017435336 4.089449836440818 0.027608270625689286 0.04159260449546801 1.902135713391114e-08 7.720758500293335 -0.2233842158159126 S(ph)PPPVSK ddPTM_A549_PD325901_60min_R1 1 SPPPVSK 7 0 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(1)PPPVSK 54.608000000000004 0.042052 39332000.0 7116.9 7270.5 6849.5 6395.9 8874.1 7929.1 6071.9 6778.6 7428.5 9197.9 8345.6 True False 7839.402448815129 7883.210550821965 7314.348259389504 6790.9602168571855 8250.813829983033 7864.528038484729 6302.96947717117 6643.395505291171 7116.305978304612 8617.14302427657 7319.144107117221 1.0710818552120052 1.0770672684468992 0.9993447529304617 0.927835292961861 1.1272921682140191 1.0745147142050626 0.8611620955846585 0.9076738219747655 0.9722866327204341 1.177342992317525 1.0 12.83745923581999 S(ph)PPRASYVAPLTAQPATYR ddPTM_A549_MK2206_60min_R1 2 SPPRASYVAPLTAQPATYR 19 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 S(0.988)PPRAS(0.01)Y(0.002)VAPLTAQPATYR;S(0.987)PPRAS(0.01)Y(0.003)VAPLTAQPATYR 62.646 0.00069703 20185300.0 6440.799999999999 7999.5 6546.6 6196.200000000001 10598.1 6904.4 6234.5 6121.5 12681.3 9185.4 10672.400000000001 True False 7527.849577558594 8406.640381372925 7475.006320486435 7714.269278157993 9039.133529218178 7635.0190252302045 7367.227949324857 6989.241371307506 9809.00579787485 7110.411760462641 8022.148536744437 0.9383832202904535 1.047928786517399 0.9317960501788409 0.9616213465537017 1.126772146865091 0.9517424154213757 0.9183609497605537 0.8712430765017838 1.2227404856624058 0.8863475573774655 1.0 12.969772963758995 -8.757202096553987 24.999970229504004 1.1051830051362135 0.9727255312019651 0.0 0.10393640508121053 106.25927145046992 626929.6852474464 0.01709356188091395 0.01904859346448678 1.7490325965016314e-09 8.757202096553987 -0.13245747393424834 S(ph)PPRASYVAPLTAQPATYR ddPTM_A549_PD325901_60min_R1 1 SPPRASYVAPLTAQPATYR 19 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 S(0.978)PPRAS(0.014)Y(0.008)VAPLTAQPATYR 63.115 0.00025287 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PPREGSQGELTPANSQSR ddPTM_A549_MK2206_60min_R1 3 SPPREGSQGELTPANSQSR 19 1 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 S(0.916)PPREGS(0.082)QGELT(0.002)PANSQSR;S(0.989)PPREGS(0.01)QGELT(0.001)PANSQSR;S(0.979)PPREGS(0.02)QGELT(0.001)PANSQSR 48.832 0.0050428 49158400.0 2367.78 2705.38 2959.94 2675.33 3616.63 3180.13 3142.7400000000002 3221.96 3941.6899999999996 4071.67 4478.450000000001 True False 2767.4033773369274 2843.0722863877336 3379.704000284215 3330.785970100129 3084.628517920791 3516.649245800551 3713.735177714527 3678.68269683867 3048.903508585502 3151.876919102374 3366.3272660679045 0.8220838791379425 0.8445620587889638 1.0039736879866512 0.9894421150533916 0.9163186684234191 1.0446545947115333 1.1032008726983986 1.0927881949919913 0.9057062096481265 0.936295454952595 1.0 11.716959723416128 -5.72937635087831 7.313619700217575 0.9816787970942226 0.8315408513695374 0.48822230837323266 0.06346746339750148 0.15016557437734662 25.33882855625343 0.009941887249241842 0.0379558964593836 1.8647630242540898e-06 5.72937635087831 -0.1501379457246852 S(ph)PPRGPAS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 SPPRGPASPQR 11 1 Q6NT89;H0YES3 Q6NT89 TRNP1 TMF-regulated nuclear protein 1 2 S(1)PPRGPAS(1)PQR 46.891999999999996 0.0096624 9421100.0 903.73 706.72 880.52 843.85 1036.5 830.79 847.08 815.2 989.61 1093.7 798.03 True False 995.4760043091366 766.2777746340554 940.277382196898 895.9726979776012 963.6998157308813 824.0243216875461 879.3160929399619 798.940196487972 948.0201331614763 1024.6435953479902 699.877369128973 1.4223577561138296 1.0948743428977001 1.3434887648490663 1.2801852688745703 1.3769552470745645 1.177383864709155 1.25638594949042 1.141543121307504 1.3545517757508398 1.464033044279175 1.0 9.450958348334833 -10.903655737872446 1.0050136415066355 0.990106348006591 1.2722488477502 0.0 0.1676045295803695 0.3582806615783832 0.6040574715051112 0.07618273294113978 0.01571448643781498 1.2483726982348822e-11 10.903655737872446 0.28214249974360905 S(ph)PPRGPASPQR ddPTM_A549_MK2206_60min_R1 1 SPPRGPASPQR 11 1 Q6NT89;H0YES3 Q6NT89 TRNP1 TMF-regulated nuclear protein 1 1 S(0.999)PPRGPAS(0.001)PQR 41.967 0.023219 3493400.0 1219.9 1029.9 946.02 930.33 1147.5 1173.3 1176.0 712.9 1466.1 1515.7 1935.0 True False 1425.7892963084896 1082.31751094143 1080.1798611961299 1158.2608917641005 978.7042700840586 1297.4578272264928 1389.663977609436 813.9557581646853 1134.0306908806135 1173.302317300632 1454.4860967168083 0.9802701445733337 0.7441236553477759 0.7426539611718567 0.796336860406316 0.6728866451822911 0.8920386589842465 0.9554329743998967 0.5596174208897676 0.7796779174723262 0.8066782624798624 1.0 10.506293790592517 -10.558676225643316 0.9244349160557305 0.9964497051179477 0.7880311255637696 0.028448719285464774 0.12762692496733316 0.5168361580831451 0.8105016772585396 0.06837326298712278 0.020510729158397766 2.762636684073683e-11 10.558676225643316 -0.20841857955417809 S(ph)PPRPPR ddPTM_A549_MK2206_60min_R1 2 SPPRPPR 7 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;J3KS35;E7ESP2;Q9UQ88-9;P21127-10;Q9UKB5;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A;AJAP1 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A;Adherens junction-associated protein 1 1 S(1)PPRPPR;S(1)PPRPPR 84.615 0.0038972 495600000.0 2084.4 2343.5 2010.18 1611.99 2874.6 2547.8999999999996 2678.1 2148.15 3324.8 2998.7 2926.7 True False 2436.1957613127443 2462.774140102187 2295.2537508501264 2006.9276223649817 2451.750147959595 2817.5170868408622 3164.6761041121026 2452.6568409334686 2571.7381086145992 2321.291587312402 2199.9196171891913 1.1074021715509041 1.1194836942491753 1.04333528048754 0.9122731606572094 1.114472605636457 1.2807363800140876 1.438541699153339 1.1148847538653237 1.1690145805874832 1.0551710931503426 1.0 11.103235094775124 -4.9575809801574255 15.84490568424742 1.109766283076898 1.0963047882889232 0.0 0.13464534846457613 85018.47219820815 9485.034180487053 0.01978761196853723 34440.514272165565 1.1026026193126402e-05 4.9575809801574255 -0.01346149478797476 S(ph)PPRPPR ddPTM_A549_PD325901_60min_R1 2 SPPRPPR 7 1 P21127;P21127-8;P21127-2;P21127-3;P21127-9;A0A0D9SEI3;P21127-6;A0A0D9SEN2;A0A0D9SER5;J3KS35;E7ESP2;Q9UQ88-9;P21127-10;Q9UKB5;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q5QPR4 P21127;Q5QPR3 CDK11B;CDK11A;AJAP1 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A;Adherens junction-associated protein 1 1 S(1)PPRPPR;S(1)PPRPPR 85.73100000000001 0.0037563 690280000.0 3929.5 4023.1000000000004 3965.73 4432.7 5433.9 4005.7 4106.4 4405.8 4327.1 4927.5 5187.0 True False 4328.419947254992 4362.140756070677 4234.868285671766 4706.49781160788 5052.24160993732 3973.0789072856023 4262.671299108303 4317.922862716765 4145.247034895587 4616.376809067588 4549.031883102115 0.9515035415191063 0.9589162855231536 0.9309383610615383 1.0346152615660247 1.1106190811070007 0.8733899892071643 0.9370502139020986 0.9491959989896246 0.911237190993004 1.0148042325699305 1.0 12.151343830839712 S(ph)PPSDVR ddPTM_A549_MK2206_60min_R1 2 SPPSDVR 7 0 I3L229;H7C0J3 I3L229 CHD3 1 S(0.998)PPS(0.002)DVR;S(0.997)PPS(0.003)DVR 64.265 0.025907 7581200.0 1632.79 1753.54 1333.32 1412.13 2115.6400000000003 1696.08 1332.3200000000002 1829.37 2551.1400000000003 2210.1 2217.68 True False 1908.3650341171733 1842.7876960250867 1522.4048249825835 1758.1019133929246 1804.4321585713612 1875.5580598332142 1574.3852981705818 2088.68879971066 1973.3108633334489 1710.8368750188868 1666.9688511457014 1.1448114539186267 1.105472183693502 0.9132773080530212 1.0546699251066316 1.082463033026191 1.125130837654315 0.9444599382217087 1.2529861000552662 1.1837718875053962 1.0263160429440747 1.0 10.703011431147496 -6.797785201269032 4.541099112525725 1.0934425993774053 1.0478415754805475 0.02449758590502249 0.0957949610429189 0.6371037231097417 29.49566777175532 0.015242818005716504 0.030318610764524943 1.592996416093033e-07 6.797785201269032 -0.04560102389685783 S(ph)PPSLALR ddPTM_A549_PD325901_60min_R1 1 SPPSLALR 8 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(1)PPSLALR 66.50399999999999 0.0088411 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PPSLR ddPTM_A549_PD325901_60min_R1 1 SPPSLR 6 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(1)PPSLR 100.39 0.033236 44020000.0 3292.4 3052.2 2842.0 3073.3 4067.0 2992.3 3346.6 3085.8 3190.2 4644.9 3817.1 True False 3626.6420242632225 3309.419605696833 3034.8752103343277 3263.1307610292833 3781.34795038832 2967.931700893904 3473.9566943297855 3024.251298236729 3056.1269882193387 4351.620221296408 3347.620898590531 1.0833490810713273 0.9885885247909099 0.9065767308395403 0.9747611392924387 1.129562774560406 0.8865793919925371 1.0377389792830025 0.9034031599904421 0.9129250535824048 1.2999142833433133 1.0 11.70892044376579 -8.254114579734615 24.901657781624657 0.9535715110235421 0.9964437834949462 0.0 0.1257466878502017 1189.4684670743645 4043763.594342325 0.011457583807442695 0.01463524458597792 5.5703876623490165e-09 8.254114579734615 0.04287227247140413 S(ph)PPSSSEIFTPAHEENVR ddPTM_A549_MK2206_60min_R1 3 SPPSSSEIFTPAHEENVR 18 0 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 S(0.994)PPS(0.006)SSEIFTPAHEENVR;S(1)PPSSSEIFTPAHEENVR;S(0.973)PPS(0.009)S(0.009)S(0.009)EIFT(0.001)PAHEENVR 231.5 5.0936e-65 110809300.0 5969.45 6612.1 6739.7 5910.75 9099.6 6924.62 6234.8099999999995 7670.4 10485.800000000001 9880.1 9674.8 True False 6976.947220959686 6948.627647437455 7695.49080410938 7358.884015343652 7761.060894167232 7657.378692209251 7367.5942723121525 8757.702689614818 8110.7830423817895 7648.178547972543 7272.2801491037635 0.9593892256501595 0.955495044878573 1.0581950428653073 1.0119087637528048 1.067211484574574 1.0529543052811225 1.013106497722057 1.2042581570092727 1.1153012364878934 1.051689207671009 1.0 12.828192062018326 -5.665513402740539 0.9445885957065273 1.0644839432128748 0.9215996369385574 0.3508243583307392 0.054622294750107374 1.2521790101269057 1.2431499312349221 0.009756688074327143 0.15723023698025143 2.1601633690511062e-06 5.665513402740539 -0.14288430627431736 S(ph)PPSSSEIFTPAHEENVR ddPTM_A549_PD325901_60min_R1 2 SPPSSSEIFTPAHEENVR 18 0 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 S(0.994)PPS(0.006)SSEIFTPAHEENVR;S(0.996)PPS(0.003)SSEIFTPAHEENVR 177.29 3.0734e-31 145954000.0 4992.9 5526.5 5883.5 6022.3 7370.8 6261.2 5659.1 6230.799999999999 5700.1 8354.7 7995.6 True False 5499.775532421288 5992.237550253437 6282.789690359612 6394.28379336435 6853.100435879579 6210.210863094243 5874.460147278345 6106.521806031956 5460.544619631701 7827.182816177983 7012.191888284423 0.7843161767449639 0.8545455751524614 0.8959808559797893 0.9118808919144897 0.9773121650206628 0.8856304793184446 0.8377494855913832 0.8708435113183924 0.7787215048628193 1.1162248467922278 1.0 12.775649760578206 -11.060849472845058 1.3884109451999231 0.9995631952013553 0.8601033869540755 0.5238560940285031 0.06511769773919324 0.3388561667949313 1.1713659636126266 0.04348915453586185 0.009779832419083999 8.69261664548002e-12 11.060849472845058 -0.13945980824727977 S(ph)PPSTGSTYGSSQK ddPTM_A549_MK2206_60min_R1 2 SPPSTGSTYGSSQK 14 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(1)PPSTGSTYGSSQK;S(0.814)PPS(0.092)T(0.092)GS(0.001)TYGSSQK 121.08 2.0589e-06 30983000.0 12784.800000000001 14187.6 13117.0 10732.8 19285.7 14673.4 12535.6 14412.1 19646.8 18476.4 18183.0 True False 14942.561681649966 14909.6882398608 14977.187838850787 13362.336481813692 16448.7990776123 16226.129448585385 14813.156256565351 16455.05931020517 15196.831169492694 14302.568407582907 13667.659274729576 1.093278767146148 1.0908735680459665 1.095812204401556 0.9776609303188878 1.2034832553972743 1.1871915389774326 1.0838107651654523 1.2039412879299147 1.1118825004359332 1.0464533919152659 1.0 13.738478567490356 -10.420696468264065 0.9154347905904153 1.0042984091865346 1.1159135954175063 0.23340624026992318 0.06329990379572122 0.5078349432975305 0.8062651147661416 0.03396919943907456 0.011736254039843012 3.795801837825397e-11 10.420696468264065 0.11161518623097177 S(ph)PPSTGSTYGSSQK ddPTM_A549_PD325901_60min_R1 2 SPPSTGSTYGSSQK 14 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.998)PPS(0.002)TGSTYGSSQK;S(0.681)PPS(0.251)T(0.068)GS(0.001)TYGSSQK 112.13 7.718600000000001e-06 53657000.0 16362.1 18689.5 17662.199999999997 18776.4 21758.0 19495.6 19017.5 19207.3 17456.4 21708.0 19695.3 True False 18023.16834685861 20264.529755805943 18860.863103436644 19936.175583701624 20229.7931410251 19336.83429734557 19741.221369275314 18824.19533366463 16722.768214266216 20337.353175289532 17272.902958793355 1.0434359754035036 1.1731976844974747 1.091933599605785 1.154187899466687 1.1711866377809088 1.1194895463418035 1.1429011913266947 1.0898107503163814 0.9681504176895133 1.177413734321718 1.0 14.076222948363107 -8.637655418881547 3.980540541351446 0.9849789781996857 1.1300214225335017 0.021351787266430722 0.06817154947966261 0.07024418628128899 2.072433752872123 0.005809154681491406 0.006579989777406487 2.303268568884683e-09 8.637655418881547 0.14504244433381597 S(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_A549_MK2206_60min_R1 2 SPPSTGSTYGSSQKEESAASGGAAYTK 27 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.936)PPS(0.015)T(0.015)GS(0.015)T(0.015)Y(0.003)GS(0.001)S(0.001)QKEESAASGGAAYTK;S(0.991)PPS(0.004)T(0.004)GSTYGSSQKEESAASGGAAYTK 117.49 5.948099999999999e-18 31420000.0 2358.67 2508.5 2530.0 1813.55 4659.6 2926.3 2296.69 2427.8 4145.4 3522.8 3476.2 True False 2756.755832055042 2636.171935330204 2888.7920433248837 2257.8698314133535 3974.1790125347957 3235.9591236792685 2713.968844163111 2771.948084825674 3206.473518843526 2726.997033309143 2612.9636017607086 1.0550303227329463 1.008881996501542 1.1055615322686898 0.864103055202116 1.5209469469290928 1.2384248756847447 1.0386554341340009 1.0608445073470736 1.2271405222341747 1.0436414160042622 1.0 11.351471312907828 S(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_A549_PD325901_60min_R1 2 SPPSTGSTYGSSQKEESAASGGAAYTK 27 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.967)PPS(0.029)T(0.004)GSTYGSSQKEESAASGGAAYTK;S(0.966)PPS(0.015)T(0.015)GS(0.002)T(0.002)YGSSQKEESAASGGAAYTK 150.04 1.626e-33 59062000.0 3069.0 3363.3 2987.5 3454.0 4433.0 3870.1000000000004 3719.3999999999996 3878.1000000000004 3557.9 4282.2 4584.4 True False 3380.562620721612 3646.737094502378 3190.249715296905 3667.3457353968515 4121.641373019773 3838.583188727564 3860.943802333773 3800.748253189403 3408.373835930533 4011.821161195174 4020.547862905985 0.8408213845458856 0.907024917710239 0.7934863168103279 0.912150746725884 1.025144212570254 0.9547413237242499 0.9603029074607626 0.9453309307061166 0.8477386545690858 0.9978294744874637 1.0 11.973176389360557 -6.5087864482652025 24.153377951551132 0.9391393325799918 0.853054969574448 0.4434354171114344 0.052431749691007085 438.66496799021724 751844.3715764871 0.009058252683552055 0.02029897209231362 3.098942739982444e-07 6.5087864482652025 -0.08608436300554378 S(ph)PPSYSVLYPSSDPK ddPTM_A549_MK2206_60min_R1 2 SPPSYSVLYPSSDPK 15 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.977)PPS(0.022)YS(0.001)VLYPSSDPK;S(0.995)PPS(0.004)YSVLYPSSDPK 97.417 1.4666e-05 20809000.0 2468.8 2636.8999999999996 2705.9 2456.9 3937.6 2688.7 3067.3999999999996 2811.7 4624.5 4100.700000000001 4059.7 True False 2885.4730836350527 2771.1069468894616 3089.6373083133617 3058.8406102944336 3358.384256107178 2973.216449385384 3624.7068749312803 3210.267085470117 3577.0581338090124 3174.349021940163 3051.5644479799657 0.9455717330647039 0.9080938627148584 1.0124765054064642 1.0023844039470589 1.1005450854332495 0.9743253010283149 1.187819211005265 1.0520069755024204 1.1722046821514474 1.040236598654004 1.0 11.575333344612714 -6.218382508588272 0.9815729839044001 1.0840139600392715 0.9153644769340669 0.42372097549668974 0.06366228563116616 0.5693512394135642 0.8795262696683529 0.011578436080140024 0.07069024075554077 6.04807950312043e-07 6.218382508588272 -0.16864948310520467 S(ph)PPSYSVLYPSSDPK ddPTM_A549_PD325901_60min_R1 2 SPPSYSVLYPSSDPK 15 0 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.996)PPS(0.003)YS(0.001)VLYPSSDPK;S(0.901)PPS(0.048)Y(0.001)S(0.048)VLYPS(0.001)S(0.001)DPK 98.439 1.2121e-05 11532000.0 3074.0 3236.5 3818.8 3848.4 3766.5 3500.1000000000004 3917.9 4043.2 3696.8 3965.3 4074.3 True False 3386.070217040806 3509.2512134977364 4077.9667323099006 4086.106927649461 3501.9540337195967 3471.596346054457 4066.997828457144 3962.5552041709593 3541.436351968293 3714.930281277667 3573.1869291156636 0.9476331029451158 0.9821068091632836 1.1412687925955125 1.1435469256742024 0.9800646042848655 0.9715686346456133 1.1381990108935316 1.1089694669715087 0.9911142132283495 1.039668608156776 1.0 11.802995674279064 -8.810714990856383 24.97883883731897 0.9958038844805382 1.053227656590253 0.051990496069658554 0.07162352973693303 179.32971040381085 90905.03880787891 0.012638300324361161 0.013454507319289972 1.5462688576492778e-09 8.810714990856383 0.05742377210971472 S(ph)PPTQVAISSDSAR ddPTM_A549_MK2206_60min_R1 1 SPPTQVAISSDSAR 14 0 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 S(0.998)PPT(0.002)QVAISSDSAR 65.374 0.004711 4053400.0 2798.8 3803.4 2655.4 3253.4 4335.2 3558.0 3072.5 3236.2 4522.2 4181.9 4306.5 True False 3271.169015909667 3996.9768143651204 3031.975648950554 4050.4831460506757 3697.4978228047125 3934.5051983907465 3630.7334789158103 3694.941260446845 3497.928920469482 3237.205885544311 3237.077196646479 1.0105316670540037 1.2347486857915764 0.9366398960431328 1.2512778966923812 1.1422334402884233 1.2154499134178152 1.1216085556060102 1.1414436653765008 1.0805824847468073 1.0000397546582964 1.0 11.660476055489083 -9.507333140241174 0.8520725096668138 1.013272790774799 1.1357996355148121 0.23454888506069416 0.08878907379331125 0.49994305626488966 0.7733753725662024 0.025998615949572597 0.017518993957762123 3.1093303053193507e-10 9.507333140241174 0.12252684474001319 S(ph)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK ddPTM_A549_MK2206_60min_R1 2 SPPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK 37 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 S(1)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK;S(0.995)PPVQPHT(0.005)PVTISLGTAPSLQNNQPVEFNHAINYVNK 218.53 1.896899999999999e-113 71292000.0 3987.7 4569.200000000001 5422.6 4745.0 6450.7 5427.1 5173.0 5546.6 6988.9 8079.3 7823.7 True False 4660.726270095391 4801.752763368857 6191.606219025105 5907.525213011145 5501.810575190617 6001.39211978258 6112.867139603413 6332.847535750099 5405.925308979957 6254.180518682456 5880.859366864758 0.7925246939853532 0.8165052866973758 1.0528403814434377 1.00453434514973 0.9355453398852109 1.020495772028992 1.0394513383615132 1.0768575034172783 0.9192407047580868 1.0634807140468527 1.0 12.521811275391023 -5.7057724659187725 8.34458804678735 0.9834969842839096 0.8025358677436998 0.665184944770465 0.05379226833949609 0.13416429704529909 17.87035472899952 0.00758150746962575 0.02944069643632433 1.968917568096963e-06 5.7057724659187725 -0.18096111654020985 S(ph)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK ddPTM_A549_PD325901_60min_R1 2 SPPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK 37 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 S(1)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK;S(0.662)PPVQPHT(0.337)PVT(0.001)ISLGTAPSLQNNQPVEFNHAINYVNK 296.38 5.365499999999998e-218 142563000.0 9963.7 11041.900000000001 11993.4 11400.5 15080.3 13671.900000000001 12678.900000000001 14747.4 11704.4 14736.7 14404.7 True False 10975.20748911174 11972.43966455142 12807.344246173028 12104.682992585924 14021.111752210716 13560.560579304003 13161.402477660296 14453.251537888507 11212.5047711474 13806.222247019054 12633.01321891673 0.868771946876254 0.9477105308988227 1.0137996394237325 0.9581786057549847 1.109878657549051 1.073422495830081 1.041826067113771 1.1440858398094718 0.8875558488577963 1.0928685031648313 1.0 13.62491117049649 -4.289722216089033 12.962083712007837 0.9814401401634328 0.9977343511809293 0.0 0.09147893121514775 0.0 0.0 0.012319248696179457 0.0 5.1318952588212696e-05 4.289722216089033 0.016294211017496507 S(ph)PPWEP ddPTM_A549_MK2206_60min_R1 2 SPPWEP 6 0 Q9UBL3;H0YAQ0;F5H8F7;Q9UBL3-2;Q9UBL3-3 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 1 S(1)PPWEP;S(1)PPWEP 81.297 0.016155000000000003 25303000.0 1889.0500000000002 1876.54 1454.94 1516.08 2326.2 1769.4 1318.92 1510.26 2489.8 2932.1000000000004 2175.6 True False 2207.875457161696 1972.047870649608 1661.2723697688182 1887.5196680594172 1984.0190614985058 1956.636733567338 1558.5506916229924 1724.3439799772725 1925.8642753935962 2269.7365735681105 1635.3384764946193 1.3501030452694547 1.2058958429674644 1.0158584254250465 1.154207337006681 1.2132161567868753 1.1964720219641796 0.9530447146108719 1.0544263495062125 1.1776548421472506 1.3879307594066619 1.0 10.675373555138696 -7.674464506887822 24.99865382538169 1.074407121041842 1.1816573372051677 0.03479337812334893 0.13074675108891354 28.219224851691834 8105.844655980564 0.015754664009929698 0.023367940733421282 2.1160966180981913e-08 7.674464506887822 0.10725021616332575 S(ph)PPWEP ddPTM_A549_PD325901_60min_R1 2 SPPWEP 6 0 Q9UBL3;H0YAQ0;F5H8F7;Q9UBL3-2;Q9UBL3-3 Q9UBL3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 1 S(1)PPWEP;S(1)PPWEP 76.774 0.017168 46719000.0 11559.599999999999 11258.0 9796.9 10802.3 10548.099999999999 11760.5 10323.0 10557.5 12200.7 12504.2 15722.2 True False 12733.122082272243 12206.751169954438 10461.776547545525 11469.5335371967 9807.237844969526 11664.726387181354 10715.847413962356 10346.922380301468 11687.947008077137 11714.682678019879 13788.469071237343 0.9234616269933442 0.8852869094378027 0.7587337284143258 0.8318206668151485 0.7112637229195633 0.8459769048265044 0.7771600573348308 0.7504040025650912 0.8476609656729853 0.8495999532287911 1.0 13.751174663381557 -10.11469265748419 0.7795165801905998 0.9922177273969173 0.8098546781371897 0.16810817840925374 0.07260867393997128 0.3266496969304361 0.39162119111803456 0.030786562197467084 0.012442106095868632 7.679047297000853e-11 10.11469265748419 -0.18236304925972757 S(ph)PQFINLK ddPTM_A549_MK2206_60min_R1 2 SPQFINLK 8 0 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 S(1)PQFINLK;S(1)PQFINLK 98.29899999999999 0.0024381999999999997 21010000.0 2933.3 3156.0 2886.5 2892.6 4276.4 3193.5 3255.6 3703.7 4905.3 4157.3 4454.299999999999 True False 3428.369327700382 3316.6269196340936 3295.8491039752075 3601.2871298537502 3647.3472249128226 3531.434050326266 3847.100378831024 4228.710817105545 3794.2573821544734 3218.1630426297547 3348.1743775739947 1.023951843925314 0.9905777135888724 0.9843719986780675 1.0755972430752412 1.0893540221031144 1.0547342079850264 1.1490143418451637 1.2629900179122586 1.1332317120542865 0.9611694851334347 1.0 11.709158952069453 -6.323882878220289 5.226109797450942 1.0869100981615882 0.9987571796358081 0.22444900121620492 0.07531147405324135 0.27437456208974886 15.307004333278131 0.011536306677242807 0.027635981184434767 4.7436989744415885e-07 6.323882878220289 -0.08815291852578011 S(ph)PQFINLK ddPTM_A549_PD325901_60min_R1 2 SPQFINLK 8 0 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 S(1)PQFINLK;S(1)PQFINLK 117.25 0.0012678 36906000.0 9491.3 10123.3 10043.9 9024.4 11694.2 9703.5 10851.8 9786.6 10873.5 9590.9 10596.4 True False 10454.849788874228 10976.426018724445 10725.539452877178 9581.816692100563 10872.839734799874 9624.477913185166 11264.771187332808 9591.398585560824 10416.524608614818 8985.328937206763 9293.109976113985 1.1250108753416515 1.1811359218751394 1.1541388706735374 1.0310667490999934 1.1699893536981976 1.0356573781998593 1.2121637660897773 1.0320978241098544 1.1208868328673973 0.9668807277974425 1.0 13.1819457656919 -14.999999999972447 0.19867093034394523 0.4384438181208849 1.1407853423844045 0.4464234019324179 0.05885062274290658 34.543976243465 0.4050867909492931 7.538727750097848 0.046770508793356994 1.0000000000634432e-15 14.999999999972447 0.7023415242635196 S(ph)PQKPIVR ddPTM_A549_MK2206_60min_R1 1 SPQKPIVR 8 1 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8YES9;H7C5K3;A0A2R8Y467 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(1)PQKPIVR 43.512 0.019124000000000002 5431800.0 1226.4 1048.9 1005.7 865.15 1339.7 1279.2 1123.9 999.81 1717.5 1212.9 1303.0 True False 1433.3863373987485 1102.2845297858687 1148.3233825975635 1077.1117888380595 1142.6319046898586 1414.564094935762 1328.0980820027598 1141.536129289709 1328.4889922839193 938.9050476043657 979.4291390294585 1.4634916200462729 1.125435711335024 1.1724415139776898 1.0997342696025945 1.166630498478044 1.4442740557397442 1.355992005015091 1.165511708607002 1.3563911255492695 0.9586247847748851 1.0 9.93579730812888 -10.923539429730347 1.1399309124649348 0.9978355844079102 1.2611088379178788 0.4338916459628366 0.12295519073677161 0.43427657011255455 0.9888340593377513 0.09138503130173593 0.020841067664414566 1.1925059929528665e-11 10.923539429730347 0.26327325350996855 S(ph)PQKPIVR ddPTM_A549_PD325901_60min_R1 1 SPQKPIVR 8 1 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8YES9;H7C5K3;A0A2R8Y467 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(1)PQKPIVR 48.74100000000001 0.0097139 6935400.0 1460.0 1498.1 1523.3 1523.4 1926.9 1670.8 1750.7 2262.8 2060.3 2842.9 2846.9 True False 1608.2181252048065 1624.3501445824077 1626.6802983470377 1617.4969581075754 1791.5611914441254 1657.1935587519738 1817.3238465197999 2217.66667886774 1973.7127558862478 2663.39880882765 2496.7493479860063 0.6441247802876447 0.6505859892955149 0.651519264302279 0.6478411456930282 0.717557488455652 0.663740459204983 0.7278759671994057 0.8882215912689083 0.7905129753927185 1.0667465722885123 1.0 11.28583527910865 -10.049770250441892 0.18380446068883038 1.1823661819465787 0.5624118268025282 0.8979003473435307 0.046223596391554427 1.361512077950121 0.10150006763841098 0.23663158907903467 0.08672092348239206 8.917225505749178e-11 10.049770250441892 -0.6199543551440505 S(ph)PQLSDFGLER ddPTM_A549_MK2206_60min_R1 4 SPQLSDFGLER 11 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 S(1)PQLSDFGLER;S(0.997)PQLS(0.003)DFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER 120.92 1.1193e-05 48191300.0 2565.92 3053.3199999999997 2667.2 2646.66 4185.54 3146.02 3066.1600000000003 3048.15 4254.52 4113.370000000001 4145.08 True False 2998.984565279026 3208.7209462158335 3045.449066385822 3295.091818813081 3569.852610551312 3478.9297482409384 3623.241582982101 3480.23459706787 3290.8780130723594 3184.1568601404656 3115.742237611841 0.9625265303004308 1.0298415919910175 0.9774393496427684 1.057562393652534 1.1457470927657796 1.1165653263112914 1.1628823267996806 1.116984118601353 1.0562099692799867 1.0219577286281112 1.0 11.605360170211531 -6.273102153022273 21.830459908971008 1.0598782609516348 0.993926408354684 0.31323734047862317 0.053976144466438294 184.69659523680204 345719.29330065066 0.009494884468516724 0.02229676376095208 5.332094613254637e-07 6.273102153022273 -0.0659518525969508 S(ph)PQLSDFGLER ddPTM_A549_PD325901_60min_R1 2 SPQLSDFGLER 11 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 S(1)PQLSDFGLER;S(1)PQLSDFGLER 136.33 3.9167e-08 68538000.0 2584.0 2736.8 2554.2 2571.5 2765.7 2693.9 2351.5 2720.6 3383.0 3701.9 4158.9 True False 2846.325777759739 2967.4397408004365 2727.5433716523353 2730.3357146997705 2571.4467731470318 2671.961771559699 2440.9876192901743 2666.3354987305866 3240.824274699401 3468.161402229796 3647.381665439248 0.7803750851549452 0.8135808130304545 0.7478085985618568 0.7485741732407817 0.7050117067574163 0.7325698313609084 0.6692438146574414 0.731027280198132 0.8885344534705045 0.9508633097249862 1.0 11.832645457197758 -9.035881046266178 1.6511263618855851 0.9627709468568445 0.7394400222811929 0.830261004606305 0.04154713551893251 0.10226762531893498 0.5662888714454347 0.010125548144686579 0.009837454244546734 9.207017184281288e-10 9.035881046266178 -0.22333092457565162 S(ph)PQMVSAIVR ddPTM_A549_PD325901_60min_R1 4 SPQMVSAIVR 10 0 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y7Z0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(0.999)PQMVS(0.001)AIVR 96.745 0.00052993 38131500.0 3583.52 4174.9400000000005 4347.21 3420.34 4682.889999999999 4232.59 4047.9500000000003 4130.81 4356.9 4172.91 4782.92 True False 3947.316312352006 4526.776845753205 4642.237812497358 3631.6066336442586 4353.979961493475 4198.121190350742 4201.996952373232 4048.417753992247 4173.794644527881 3909.4317504467217 4194.651161427951 0.9410356571840062 1.079178380166467 1.1067041414993468 0.8657708338273309 1.0379838022123595 1.0008272508938765 1.0017512280908671 0.9651381242901919 0.995027830420833 0.9320040213107652 1.0 12.03433512188167 S(ph)PQNVMAQQK ddPTM_A549_PD325901_60min_R1 1 SPQNVMAQQK 10 0 Q6ZVL6;A0A590UJI0;H0YDE5 Q6ZVL6 KIAA1549L UPF0606 protein KIAA1549L 1 S(1)PQNVMAQQK 50.284 0.0097525 1856500.0 859.86 1021.8 1079.2 1042.7 1313.6 1047.0 1000.7 984.39 968.17 1407.0 1285.9 True False 947.1523542045237 1107.9106720074112 1152.441001756793 1107.1052108564843 1221.3372676739846 1038.4735791317441 1038.782186104052 964.7555692109836 927.4811818018673 1318.1617798798786 1127.7424519917129 0.8398658333130513 0.9824146196241202 1.0219008779189431 0.9817003952464669 1.0829930765814246 0.9208428549423582 0.921116505164324 0.8554750843218882 0.822422868061619 1.1688500131850716 1.0 10.139221914757867 -7.492512715424158 24.79541320048264 0.9093656613347317 0.9858238191939669 0.0 0.10367072690224031 894.2748521443172 730221.7874811324 0.01249724365199766 0.019961247130274255 3.2172683350207666e-08 7.492512715424158 0.07645815785923515 S(ph)PQPDPVGTPTIFKPQSK ddPTM_A549_MK2206_60min_R1 1 SPQPDPVGTPTIFKPQSK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.999)PQPDPVGT(0.001)PTIFKPQSK 103.67 1.7471e-09 9417900.0 2656.9 2680.3 2958.9 2719.5 4174.9 3249.1 2770.0 2802.7 4873.2 3879.5 3681.7 True False 3105.319765031583 2816.7158215130758 3378.5165126458487 3385.777622082995 3560.77774045659 3592.9176054219724 3273.2731445392346 3199.9913079087705 3769.4279809013055 3003.118255570232 2767.4322802492397 1.1220942196829158 1.017808400088257 1.2208127139217924 1.2234364852382462 1.2866720410357793 1.2982856458906333 1.182783466067122 1.156303383011986 1.3620669267331897 1.0851641346395533 1.0 11.43433229899721 -5.769149650130971 24.934943014301986 1.1961594524282408 1.069951304579619 0.21053430493780034 0.09793462526242122 244.17808146753512 789681.5098343645 0.01849249872742006 0.059066394337496365 1.7015720759810856e-06 5.769149650130971 -0.1262081478486219 S(ph)PQPDPVGTPTIFKPQSK ddPTM_A549_PD325901_60min_R1 2 SPQPDPVGTPTIFKPQSK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)PQPDPVGTPTIFKPQSK;S(1)PQPDPVGTPTIFKPQSK 133.95 2.9847e-13 26436000.0 10187.099999999999 11083.3 10486.6 11209.4 12886.8 11833.4 12152.5 12498.8 12727.3 12984.7 13768.7 True False 11221.286892653348 12017.328587844726 11198.283737048543 11901.779179605519 11981.675625046526 11737.032713751269 12614.970037603156 12249.501628881088 12192.415841377966 12164.84382601724 12075.237186980548 0.9292808678534344 0.9952043510003878 0.9273758820342236 0.9856352297939083 0.992251782678447 0.9719918981306694 1.0446974947377883 1.0144315543622142 1.0097040457742528 1.0074206939084647 1.0 13.559763906922703 -6.783765133513556 1.204202471517662 1.0072765900502814 0.9542390539244486 0.5178381644979284 0.02326798454659109 0.2925549331350194 0.8342150909435593 0.0033972198247380465 0.009730287602439144 1.6452612400625327e-07 6.783765133513556 -0.05303753612583273 S(ph)PQPDPVKTPTSSK ddPTM_A549_MK2206_60min_R1 1 SPQPDPVKTPTSSK 14 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.617)PQPDPVKT(0.281)PT(0.073)S(0.025)S(0.004)K 83.087 9.3353e-05 13729000.0 3608.4 3709.8 2992.1 3140.5 3685.5 3482.3 2888.9 3356.9 4721.7 4550.0 5232.6 True False 4217.409703090053 3898.6129741630425 3416.4247718705087 3909.9226409824023 3143.3678321523275 3850.7946746363396 3413.775735472706 3832.7508550750895 3652.2424890055177 3522.1518398877615 3933.2010075867565 1.0722588789525596 0.9912061363360283 0.8686117910781987 0.9940815720937087 0.7991881996595346 0.9790485325333073 0.8679382845900501 0.9744609664449112 0.9285674650140439 0.8954924584565799 1.0 11.941488202251932 -10.750421724562464 0.8609065683304851 1.002432625096641 0.9376545612156345 0.0 0.07777449154077093 1.3049026955507386 1.6097713600618315 0.05615634249776452 0.012340791058826713 1.776553438063493e-11 10.750421724562464 -0.0647780638810066 S(ph)PQPPSR ddPTM_A549_MK2206_60min_R1 2 SPQPPSR 7 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(1)PQPPSR;S(1)PQPPSR 86.47200000000001 0.013134999999999999 1093750000.0 4953.0 5495.6 4812.7 4307.200000000001 7347.6 5800.1 4823.6 4807.2 7050.7 7021.9 7022.799999999999 True False 5788.945310776255 5775.302566394526 5495.21322802754 5362.464193357557 6266.777773306864 6413.86273220522 5699.985682310269 5488.6353214325645 5453.7277076542805 5435.647913078647 5278.844940580263 1.0966310577290646 1.094046639255839 1.0409878088640152 1.0158404449682703 1.1871494320911053 1.2150125272480903 1.0797789566601124 1.039741720625202 1.033128983526232 1.029704030761159 1.0 12.366006573943716 -8.313137261402078 2.7847482815003297 1.016360380219815 1.1062509752904806 0.3354071347153098 0.05405347447450501 0.24307622715268215 3.733599485052555 0.009882783394812269 0.01236063235563203 4.862534980387144e-09 8.313137261402078 0.08989059507066566 S(ph)PQPPSR ddPTM_A549_PD325901_60min_R1 2 SPQPPSR 7 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(1)PQPPSR;S(1)PQPPSR 76.679 0.01757 1258730000.0 5607.0 6338.0 6310.4 6220.1 6442.6 6181.4 5642.4 6142.0 6063.8 6862.9 6812.6 True False 6176.218512344762 6872.125503212931 6738.661691517851 6604.301450127958 5990.094001763412 6131.060727836639 5857.124619639751 6019.492991694212 5808.959573432525 6429.575322770159 5974.693388629547 1.0337297850461644 1.1502055513495117 1.1278673654353901 1.1053791417475278 1.0025776407477534 1.0261716089907935 0.9803222087992762 1.0074982262939087 0.9722606995176638 1.0761347745486485 1.0 12.544648962934772 -6.779057298837388 4.221616658250345 0.9910727005078196 1.1105028987759402 0.54743552937823 0.039395008742013356 0.06904503536007217 2.803526438752059 0.004175772148268758 0.008461953686543129 1.6631932017524232e-07 6.779057298837388 0.11943019826812062 S(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_A549_MK2206_60min_R1 2 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.951)PQPPVEEEDEHFDDT(0.038)VVCLDT(0.005)Y(0.005)NCDLHFK;S(0.996)PQPPVEEEDEHFDDT(0.004)VVCLDTYNCDLHFK 75.954 1.5030999999999999e-05 9471300.0 1491.79 1487.99 1631.8000000000002 1357.78 2363.82 1811.8700000000001 1845.55 2029.9099999999999 1986.72 1739.4099999999999 1984.63 True False 1743.567681236202 1563.7223352808423 1863.2137771927057 1690.43616095306 2016.1052093334188 2003.6008807780324 2180.8625458138577 2317.655958838653 1536.7310921399164 1346.476072927289 1491.7915979984923 1.1687743003617346 1.0482176849493308 1.248977256402666 1.1331583870167155 1.351465722181562 1.3430836341123147 1.4619083179848167 1.5536057194236828 1.0301245121649154 0.9025899292728485 1.0 10.542830291076875 -8.95279557327397 24.97403980041089 1.013290067599543 1.2843163367416892 0.4880008930775305 0.14066064160969025 83.03901755880189 43932.83985204323 0.025606233061677787 0.02725264158934454 1.1148191665611138e-09 8.95279557327397 0.2710262691421461 S(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_A549_PD325901_60min_R1 1 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.997)PQPPVEEEDEHFDDT(0.003)VVCLDTYNCDLHFK 93.56299999999999 2.9598e-09 38330000.0 1331.7 1482.6 1761.3 1533.8 1526.0 1511.4 1551.7 2105.0 1048.0 1402.3 1575.1 True False 1466.8932036542756 1607.543905185153 1880.832409557302 1628.5393424874608 1418.8190244142065 1499.0916595030722 1610.7507926228204 2063.0141236594463 1003.9562045181705 1313.7585386819856 1381.3726853815585 1.0619098083940286 1.1637293267755053 1.361567685144856 1.1789282933719154 1.027108063905509 1.085218837296611 1.1660508490349248 1.4934522344993428 0.7267815667289387 0.9510529291514861 1.0 10.431886886528249 -8.781253344098804 24.999983254556625 0.8709801860741891 1.1865500182698168 0.4678714564143215 0.14170890348138737 154.99013863356018 195555.7474777148 0.027291269375519116 0.029072471642807192 1.6548043577813305e-09 8.781253344098804 0.3155698321956276 S(ph)PQQTVPYVVPLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 2 S(0.998)PQQT(0.002)VPY(0.001)VVPLS(0.999)PK;S(0.994)PQQT(0.006)VPYVVPLS(1)PK 130.05 3.2069999999999998e-09 10347900.0 3988.0 3796.6 4270.1 4242.4 4038.1000000000004 4072.9 4420.1 3850.2 4727.5 4217.2 4365.299999999999 True False 4392.858824189568 4116.552806168859 4559.894664197263 4504.4434128105395 3754.4777866887316 4039.731652765689 4588.309324271526 3773.404740576529 4528.819615324093 3950.925272288144 3828.3957739166513 1.147441143394493 1.0752683497916957 1.1910719093528437 1.1765877090085322 0.980692177195594 1.0552022025227632 1.1984939894491218 0.9856360113771979 1.1829549197027953 1.0320054418632216 1.0 11.902524265884212 -11.060908029748143 1.3576637384550776 0.9997431877804557 1.1162906882397798 0.18206986895961208 0.07568759340872916 0.5078485064435075 1.6638933346710545 0.05407682868991016 0.011878398456371368 8.691444679411954e-12 11.060908029748143 0.11654750045932416 S(ph)PQQTVPYVVPLSPK ddPTM_A549_MK2206_60min_R1 3 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 S(0.997)PQQT(0.003)VPYVVPLSPK;S(1)PQQTVPYVVPLSPK;S(0.977)PQQT(0.023)VPYVVPLSPK 121.79 4.6826e-07 3452200.0 1310.9 1357.67 1879.81 1654.3200000000002 2052.91 1457.25 1825.7399999999998 1866.6599999999999 2747.4 2529.8999999999996 2372.8 True False 1532.1478715720964 1426.7696039225664 2146.3953244911268 2059.6284742652465 1750.9296584734318 1611.4552277557382 2157.4533252386495 2131.2647714064974 2125.1182866962663 1958.3938329081413 1783.568274051497 0.8590351677941198 0.7999523341383293 1.2034276207523267 1.1547797212083506 0.981700383409532 0.9035007244747675 1.2096275520408575 1.1949443160732973 1.1914981431402765 1.0980201102475973 1.0 10.800550727128014 -7.758552120115527 24.997530348457637 1.1103551450706364 0.9930476428460147 0.26444825011081896 0.1242192113749806 120.31976724522846 1041705.3118594515 0.02185214503839754 0.031634937263182485 1.7436040932364063e-08 7.758552120115527 -0.11730750222462172 S(ph)PQQTVPYVVPLSPK ddPTM_A549_PD325901_60min_R1 2 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 S(1)PQQTVPYVVPLSPK;S(0.999)PQQT(0.001)VPYVVPLSPK 140.46 2.5784000000000002e-11 9597300.0 2924.5 2830.1 3420.4 2904.2 3716.7 3258.3 3387.8 3446.4 3257.6 2943.5 3286.3 True False 3221.39308709689 3068.602459236813 3652.5289125360778 3083.5858380832487 3455.651813918926 3231.7654850859212 3516.7245828752907 3377.6588483515043 3120.6944006091544 2757.6469076591457 2882.1059335721 1.1177219579518631 1.0647084215372917 1.2673125126976545 1.0699071821629516 1.1990023592352725 1.1213208534220847 1.2201926868512567 1.1719412562206597 1.0827826847923476 0.9568166372848415 1.0 11.492907648290785 -9.351406124848923 1.0992912065722797 1.019342216209675 1.1538006257445694 0.5071785243266976 0.06295170437159878 0.2562279026485011 0.6478589812010507 0.014662949673951558 0.011751400060679202 4.4523969353837567e-10 9.351406124848923 0.1344584095348944 S(ph)PQREPQR ddPTM_A549_MK2206_60min_R1 3 SPQREPQR 8 1 O96013;O96013-4;O96013-2;O96013-3 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 S(1)PQREPQR;S(1)PQREPQR;S(1)PQREPQR 92.866 0.00071785 435469000.0 9452.3 9766.3 9371.300000000001 7923.7 10489.2 8023.5 6972.6 8571.199999999999 12134.5 12966.8 13094.5 True False 11047.617153452527 10263.36295475997 10700.291255182017 9865.006855708416 8946.25257495922 8872.541444431752 8239.431165203703 9786.193848199111 9386.055124814675 10037.59087416629 9842.77426018514 1.1224088718707164 1.0427307061461468 1.0871214733091672 1.002258773282367 0.9089157526600578 0.9014268954965204 0.8371045548136671 0.9942515788241836 0.9535985360125617 1.0197928560415328 1.0 13.264849292025719 -6.412762867985848 3.6927839263714177 0.9580119664175026 1.0797556626260882 0.5623443636521348 0.052768336808354355 0.1590527156740688 3.9036690869451474 0.007924623232563191 0.01934208020943173 3.865779974581018e-07 6.412762867985848 0.1217436962085856 S(ph)PQREPQR ddPTM_A549_PD325901_60min_R1 4 SPQREPQR 8 1 O96013;O96013-4;O96013-2;O96013-3 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 S(1)PQREPQR;S(1)PQREPQR;S(1)PQREPQR;S(1)PQREPQR 87.184 0.00075756 727015000.0 7926.08 7751.570000000001 8489.67 7801.210000000001 9251.84 8036.2699999999995 8599.630000000001 8410.86 8684.61 10188.24 9525.15 True False 8730.729806728303 8404.82200803728 9065.830058732947 8283.073023866607 8602.022675515283 7970.825281536825 8926.893625548106 8243.098799107975 8319.626043244803 9544.95278766408 8353.61693490074 1.0451436634892863 1.0061296889162596 1.0852580540121055 0.9915552853831009 1.0297363097386862 0.9541765373793186 1.068626164584141 0.9867700258877051 0.9959309970853554 1.1426131772676857 1.0 13.028185273172372 -6.304326329601991 24.99237714467438 1.0010474966457625 1.0415724663886359 0.0 0.05319454381137431 425.59264115981 248013.4990712602 0.003944723758092965 0.009166748889851556 4.962193213012582e-07 6.304326329601991 0.04052496974287334 S(ph)PQSDPADT(ph)PTNTK ddPTM_A549_MK2206_60min_R1 2 SPQSDPADTPTNTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 S(0.966)PQS(0.118)DPADT(0.796)PT(0.116)NT(0.003)K;S(0.996)PQS(0.032)DPADT(0.945)PT(0.024)NT(0.002)K 74.141 0.0014413 3704200.0 1190.55 987.03 1416.67 1245.35 1933.49 1464.99 1398.88 1296.74 2073.02 1898.39 1893.9099999999999 True False 1391.4857338470968 1037.2656110540051 1617.5751083071398 1550.460805905885 1649.076182278716 1620.0142694183414 1653.038388603988 1480.556866099697 1603.484279932698 1469.542380510885 1423.5998777431173 0.9774415940896735 0.7286215932375736 1.136256846882804 1.089112769779023 1.1583846051553854 1.137970222353915 1.161167835462734 1.0400091270356637 1.1263588210437034 1.0322720614732013 1.0 10.475327998725678 -5.772648835275013 24.999953766116864 1.0838301339919545 0.8530315733792772 0.60996446069099 0.07484382540488059 98.20954644671843 219034.17486570167 0.010766559167441054 0.033915719985812595 1.6879173011613036e-06 5.772648835275013 -0.23079856061267734 S(ph)PQSDPADT(ph)PTNTK ddPTM_A549_PD325901_60min_R1 2 SPQSDPADTPTNTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 S(0.986)PQS(0.014)DPADT(0.761)PT(0.232)NT(0.007)K;S(0.979)PQS(0.021)DPADT(0.981)PT(0.018)NT(0.001)K 107.82 2.5149e-05 5493600.0 1898.13 1449.59 1627.49 1759.73 2013.7799999999997 2428.83 1548.6 1729.93 1837.28 1869.33 1579.06 True False 2090.826760270548 1571.7520366365468 1737.9412582924047 1868.4245254632012 1872.3390399638524 2409.05041375602 1607.5328204264358 1695.4251890461678 1760.065510913306 1751.3001847781452 1384.8456304860667 1.5097904880103419 1.1349655167593502 1.2549711101607801 1.3491933572461814 1.3520200365629782 1.7395804707203848 1.1608028974768894 1.2242701653693278 1.2709470804305756 1.2646176196284467 1.0 10.435509451879183 -10.16208992563046 0.49437743347613805 0.9730547079430554 1.35157746566477 0.12651004497264362 0.17568773004865137 0.920940403528365 0.4005426292000884 0.15785618636704474 0.04299389907300286 6.885097177863122e-11 10.16208992563046 0.37852275772171473 S(ph)PQSDPADTPTNTK ddPTM_A549_MK2206_60min_R1 2 SPQSDPADTPTNTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.978)PQS(0.021)DPADTPTNTK;S(0.971)PQS(0.029)DPADTPTNTK 166.04 7.3677e-20 26912000.0 5657.1 5782.9 5705.5 5121.1 8906.4 6646.1 6446.7 6562.4 9376.099999999999 7978.2 8923.5 True False 6611.880177184001 6077.224909237011 6514.6256929605215 6375.769729894919 7596.280358236734 7349.385890675868 7617.981942563565 7492.640296507126 7252.428320555016 6175.919078899455 6707.548673928915 0.9857371893376247 0.906027701723304 0.9712379305247159 0.9505364835705831 1.1324972396789554 1.0956887900406393 1.1357326368980887 1.1170459821826901 1.0812337968927388 0.9207415971358042 1.0 12.711569903231906 -6.735904154336893 24.754277966064098 1.0625686449066283 0.9512773123149537 0.4434018764501443 0.062026261277398104 141.85516504616362 137515.95676894838 0.008144786397690954 0.016949447154540213 1.8369436988565192e-07 6.735904154336893 -0.11129133259167456 S(ph)PQSDPADTPTNTK ddPTM_A549_PD325901_60min_R1 2 SPQSDPADTPTNTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.91)PQS(0.09)DPADTPTNTK;S(1)PQSDPADTPTNTK 169.64 1.6405000000000001e-22 39618000.0 12381.8 11030.5 12728.8 11625.9 14283.3 13022.5 11339.5 13095.1 14408.3 12520.6 13484.1 True False 13638.791221000594 11960.078946543115 13592.65291249246 12344.005438665383 13280.090282709982 12916.449077596108 11771.03087771249 12833.90795759278 13802.76925721293 11730.04717922103 11825.641182752506 1.1533236135130276 1.011368327663001 1.1494220653605751 1.0438339239202439 1.1229911408168518 1.0922409092231318 0.9953820427834675 1.0852610661239084 1.1671899260180523 0.9919163788200425 1.0 13.529630787731408 -11.128198276274448 1.5027995450621154 1.000229985898263 1.0981979687699688 0.30477417256155925 0.05435833416683228 0.4142021336880912 1.6812953394030934 0.03991796594998203 0.008687071268674294 7.443920456200478e-12 11.128198276274448 0.09796798287170572 S(ph)PQSPGGNICHLGAPK ddPTM_A549_MK2206_60min_R1 2 SPQSPGGNICHLGAPK 16 0 Q9H609 Q9H609 ZNF576 Zinc finger protein 576 1 S(0.5)PQS(0.5)PGGNICHLGAPK;S(0.563)PQS(0.437)PGGNICHLGAPK 67.43 0.00069069 8034500.0 3040.2 4666.6 4249.8 3335.2 4810.4 3501.4 2691.8 3200.8 5111.5 4764.799999999999 5646.8 True False 3553.31143424631 4904.110007339817 4852.485543763676 4152.324149722818 4102.796532298346 3871.9158239587878 3180.865216776431 3654.523202038891 3953.7534113882084 3688.4283707026793 4244.543716248308 0.83714803564022 1.1553915650736872 1.1432290178065876 0.9782733851526918 0.9666048476760066 0.9122101414898653 0.7494009790969837 0.8609931823882998 0.9314907975274372 0.8689811243039403 1.0 12.051393758655564 -6.487890905018669 5.423460808455936 0.9386077233395246 1.0577514623555169 0.22725294189379752 0.10338044215468095 0.24497589166644348 19.315894803812885 0.014939827134407899 0.03435157836765845 3.2516896972747876e-07 6.487890905018669 0.11914373901599229 S(ph)PQTLAPVGEDAMK ddPTM_A549_MK2206_60min_R1 2 SPQTLAPVGEDAMK 14 0 Q92797 Q92797 SYMPK Symplekin 1 S(0.977)PQT(0.023)LAPVGEDAMK;S(0.998)PQT(0.002)LAPVGEDAMK 91.65700000000001 6.4284e-05 10944800.0 6338.1 6685.7 5321.5 6001.9 9670.8 7222.8 6532.5 8102.5 11314.7 8276.0 9501.7 True False 7407.816328332526 7025.97357306643 6076.168718795797 7472.365769435532 8248.238130831294 7987.111901893393 7719.370691950376 9251.054187865568 8751.93851586309 6406.44585206837 7142.165656420726 1.037194694815428 0.9837315334110402 0.8507459797342267 1.0462324915017842 1.1548651386174755 1.1183039271447128 1.0808165286688287 1.2952729792187017 1.2253900199017642 0.8969892551160652 1.0 12.802145881051068 -6.520188677957472 6.161171802267841 1.124357049546112 0.9575446893826697 0.2729208851397833 0.10784113659796032 0.13464697680588864 21.77489469312783 0.015029822709935959 0.0331096896197013 3.0186399962371285e-07 6.520188677957472 -0.16681236016344225 S(ph)PQVKPASTMGMGPLGK ddPTM_A549_MK2206_60min_R1 4 SPQVKPASTMGMGPLGK 17 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(0.977)PQVKPAS(0.011)T(0.011)MGMGPLGK;S(1)PQVKPASTMGMGPLGK;S(0.999)PQVKPAS(0.001)TMGMGPLGK;S(0.998)PQVKPAS(0.001)T(0.001)MGMGPLGK 74.12 0.00014846 34388200.0 11923.3 14246.2 13577.7 12902.8 20269.0 14669.0 13928.199999999999 13965.1 21908.1 19528.0 20981.7 True False 13935.661543302744 14971.270729559954 15503.222026344783 16063.98657922871 17287.45695018193 16221.263843505863 16458.773650458974 15944.69569132507 16945.950330046773 15116.611237214976 15771.364824539061 0.883605299753126 0.949269191101697 0.9829981234232139 1.018553990599111 1.0961294182532602 1.0285263212139253 1.0435858807127685 1.0109902261924928 1.0744758312660516 0.958484659088899 1.0 13.945019893222186 -5.655165773491394 1.315992644207823 1.0378578639620961 0.8715620173047408 0.6095230662237998 0.03569957042288126 0.30585461155033145 0.7216853170791984 0.004726015826764082 0.05598729091428485 2.212250115805818e-06 5.655165773491394 -0.1662958466573553 S(ph)PQVKPASTMGMGPLGK ddPTM_A549_PD325901_60min_R1 7 SPQVKPASTMGMGPLGK 17 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(0.964)PQVKPAS(0.016)T(0.02)MGMGPLGK;S(0.896)PQVKPAS(0.047)T(0.057)MGMGPLGK;S(1)PQVKPASTMGMGPLGK;S(0.989)PQVKPAS(0.005)T(0.006)MGMGPLGK;S(0.998)PQVKPAS(0.001)T(0.001)MGMGPLGK;S(0.987)PQVKPAS(0.006)T(0.006)MGMGPLGK;S(0.98)PQVKPAS(0.011)T(0.009)MGMGPLGK 78.078 0.00010278 124996600.0 40876.4 39281.6 39474.1 41914.200000000004 49964.1 45958.0 40733.0 45087.0 52541.7 44901.299999999996 46215.5 True False 45026.14203638474 42591.99829078718 42153.04980304655 44503.144939945196 46454.793982787574 45583.73328532635 42283.11660495284 44187.70441493273 50333.55506768356 42066.224255096175 40531.2864841924 1.1108984180392443 1.0508424968795027 1.040012628750056 1.0979948775448285 1.1461465453583715 1.124655475791632 1.0432216757157133 1.090212234742817 1.2418444967769315 1.0378704429108712 1.0 15.306748347554706 -6.506130925161445 20.575395569233365 1.1123729473494042 1.0661758011424756 0.011560888138640646 0.06355057463895268 192.15958005602576 236070.0064319711 0.012415645528226129 0.028077964239240295 3.117949485623947e-07 6.506130925161445 -0.04619714620692861 S(ph)PREPGYK ddPTM_A549_MK2206_60min_R1 2 SPREPGYK 8 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(1)PREPGYK;S(1)PREPGYK 60.518 0.0031414000000000004 10210300.0 3390.6000000000004 3547.3999999999996 3274.1 3702.3 6026.0 3907.6 3832.2 3859.3999999999996 6746.8 5342.2 5846.7 True False 3962.8503877888065 3727.9475078295286 3738.4166122727283 4609.363666202563 5139.583382593927 4321.099638345046 4528.461135199729 4406.481768916801 5218.660572425699 4135.393309680965 4394.803029288975 0.9017128552471091 0.8482627055148508 0.850644861068451 1.048821445576436 1.1694684263074808 0.9832294211019842 1.0304127636710896 1.0026573977377355 1.187461767375275 0.9409735276236079 1.0 12.101582791319508 -6.303211468478953 5.199668007463343 1.076760895802594 0.8644397626667766 0.4930066315173828 0.07614981298986305 0.10558820387680692 7.202351012081505 0.011382334000857919 0.02760334722207688 4.974947837592581e-07 6.303211468478953 -0.21232113313581746 S(ph)PRGSPDGSLQTGKPSAPK ddPTM_A549_PD325901_60min_R1 1 SPRGSPDGSLQTGKPSAPK 19 2 Q8IZL8;C9JFV4;E7EV54 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 S(0.814)PRGS(0.186)PDGSLQTGKPSAPK 67.413 0.00053335 4645900.0 1057.2 1439.1 830.49 1208.6 1534.6 1572.1 1733.7 1769.3 1354.8 1689.1 1566.5 True False 1164.5261657304939 1560.3780075218883 886.852045542068 1283.2524770702478 1426.8149900825954 1559.2973388280946 1799.6769022170415 1734.0099235110017 1297.8624674439104 1582.4499377363902 1373.8304308616666 0.8476491272653663 1.135786464231411 0.6455323929502962 0.9340690439251601 1.038567029839117 1.1349998542761228 1.3099701839391371 1.2621717240776436 0.9447035371242221 1.1518524427675383 1.0 10.423988230847328 -6.669116170625617 4.749494283369534 1.0374271820534091 0.8861139674104999 0.23866083710758268 0.15945391547996568 0.3315945405176549 12.92136733140517 0.024460768183490692 0.051728919984984086 2.1423174700761434e-07 6.669116170625617 -0.15131321464290926 S(ph)PRPDHPGTPPHK ddPTM_A549_MK2206_60min_R1 2 SPRPDHPGTPPHK 13 1 P30291 P30291 WEE1 Wee1-like protein kinase 1 S(0.894)PRPDHPGT(0.106)PPHK;S(0.987)PRPDHPGT(0.013)PPHK 76.15100000000001 0.00042793 15914900.0 4990.200000000001 4367.6 3443.7599999999998 2573.7 2859.6000000000004 2036.73 1920.2800000000002 2116.76 3178.8999999999996 6417.200000000001 5817.7 True False 5832.423761323574 4589.892184472079 3932.136951431029 3204.2566155377813 2438.956628089214 2252.2554167280446 2269.1700194930695 2416.8172123056233 2458.8842256601733 4967.550063061042 4373.00452964826 1.3337337571412717 1.0495969426405474 0.8991842850314422 0.7327357183861672 0.5577301856317515 0.5150361499646567 0.5189041090875771 0.5526674385814135 0.5622871435392618 1.135958133448493 1.0 12.094409127455252 -5.580176735893905 1.4323525465735705 0.7130820182144472 1.3943315795274647 0.5088610552721613 0.1948909811945499 0.4880369682546784 1.339537592770016 0.030731477242206186 0.3996721884101416 2.629197823589928e-06 5.580176735893905 0.6812495613130175 S(ph)PRPPPR ddPTM_A549_MK2206_60min_R1 1 SPRPPPR 7 1 Q9HB15 Q9HB15 KCNK12 Potassium channel subfamily K member 12 1 S(1)PRPPPR 64.711 0.0071301 252650000.0 1125.9 928.16 1349.9 1017.3 1474.3 1462.4 1327.1 1286.3 1766.2 1535.7 1524.9 True False 1315.9243943878423 975.3993795081053 1541.336118294174 1266.538545668332 1257.432422993401 1617.1501973374438 1568.2168917393562 1468.636964128538 1366.1585200418374 1188.7843034100285 1146.225244901014 1.1480504379411771 0.8509665825693266 1.344706134462499 1.1049647975409127 1.097020353187205 1.410848526091482 1.3681576973771719 1.2812812932377586 1.1918761396324127 1.0371297515024542 1.0 10.162674860842984 -4.142162980448507 16.259524400738144 1.1430838730157706 1.1347705250432623 0.0 0.1665473574200866 0.0 0.0 0.022877190403715202 0.0 7.208369153705771e-05 4.142162980448507 -0.008313347972508378 S(ph)PRPPPR ddPTM_A549_PD325901_60min_R1 1 SPRPPPR 7 1 Q9HB15 Q9HB15 KCNK12 Potassium channel subfamily K member 12 1 S(1)PRPPPR 80.755 0.004384600000000001 343950000.0 1572.2 1121.8 1497.8 1298.2 1401.6 1264.2 1497.7 1402.4 1781.1 1844.8 1659.9 True False 1731.8085866075328 1216.3380229574418 1599.449715003082 1378.3868655738836 1303.156451257505 1253.9047743441738 1554.695793072886 1374.4280318384824 1706.2465609420929 1728.3190131644624 1455.7428229730494 1.1896391033346652 0.8355445781785319 1.0987172251596895 0.9468615223936447 0.8951831537084836 0.8613504765789167 1.0679742111987514 0.94414206283463 1.1720796654572831 1.1872419948701745 1.0 10.507539790752894 -8.7390369261076 24.980858884738453 1.0812598601185008 0.9741289291053085 0.21735172119747548 0.11146023453194542 307.38993674532844 342768.7543266757 0.018350351947817214 0.020799583393513323 1.8237406312592506e-09 8.7390369261076 -0.10713093101319238 S(ph)PRPTGSDLLPGAPILSLR ddPTM_A549_MK2206_60min_R1 1 SPRPTGSDLLPGAPILSLR 19 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 S(0.998)PRPT(0.001)GS(0.001)DLLPGAPILSLR 92.833 1.0866e-06 5641300.0 356.75 338.72 307.61 133.19 389.34 258.33 268.57 471.13 592.18 472.41 427.04 True False 416.9606782999047 355.9594012099052 351.23372349690425 165.82155597912634 332.06860175557944 285.6663091344241 317.36569257361106 537.9141202751133 458.0521755171418 365.6922528970059 320.99418229557944 1.2989664651179158 1.108927889796236 1.0942058855555192 0.5165874184798581 1.0345003743706558 0.8899423257190857 0.9886960888324537 1.6757752942070103 1.4269796799474577 1.139248849564094 1.0 8.326403339927987 -8.054648885572524 24.999931707556158 1.2470817330911896 0.9775926783257999 0.2740013331468668 0.2424110639035098 399.8175649659124 182901.5532392358 0.04379446507456804 0.056538564441935384 8.817614633517527e-09 8.054648885572524 -0.26948905476538976 S(ph)PRPTGSDLLPGAPILSLR ddPTM_A549_PD325901_60min_R1 2 SPRPTGSDLLPGAPILSLR 19 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 S(0.994)PRPT(0.003)GS(0.003)DLLPGAPILSLR;S(0.982)PRPT(0.014)GS(0.004)DLLPGAPILSLR 132.84 3.5903000000000004e-17 13846500.0 2713.2 2521.5 2699.8 2894.1 2734.4 2957.4 2816.6 2013.54 2650.3999999999996 2928.6000000000004 3002.7 True False 2988.642066647726 2733.99565420502 2883.0246632162616 3072.8619840220126 2542.345177167893 2933.3159149228445 2923.787254302659 1973.3783651084286 2539.012905014275 2743.6876962019974 2633.38693568358 1.1349042657386497 1.0382050648000667 1.0947972074099626 1.1668858618470943 0.9654278840370817 1.1138947623591093 1.1102763572963867 0.7493689356350418 0.9641624899894147 1.0418855121607056 1.0 11.362703803455165 S(ph)PRPTSAPAITQGQVAEGGVLDASAK ddPTM_A549_MK2206_60min_R1 1 SPRPTSAPAITQGQVAEGGVLDASAK 26 1 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0;A0A2R8Y5C8;A0A1B0GWG0;A0A2R8Y6D0 P11171;A0A1B0GWG0 EPB41 Protein 4.1 1 S(0.493)PRPT(0.097)S(0.41)APAITQGQVAEGGVLDASAK 165.26 9.759499999999999e-42 17149000.0 4346.3 3943.1 3936.3 4119.0 5379.8 3977.1 3638.3 4243.9 5021.6 4931.7 5571.7 True False 5079.849183167137 4143.7869476581745 4494.526529699505 5128.155184908934 4588.438546577966 4397.954082214681 4299.3320150819845 4845.485821398662 3884.215617847411 3817.625544785598 4188.093118902866 1.2129265130804636 0.9894209202167171 1.0731677644447681 1.2244606409927035 1.0955913386615377 1.0501089534911752 1.026560750446795 1.1569670692202778 0.9274425156203164 0.9115426606812607 1.0 12.032077804458476 -8.766842990248584 24.999963934248527 0.9657367392726591 1.098230742336357 0.4755688177562837 0.07264077144006599 92.31153064313904 427080.75872540526 0.01222945923753801 0.013205987807011174 1.7106336458077635e-09 8.766842990248584 0.13249400306369796 S(ph)PRSPQLSDFGLER ddPTM_A549_PD325901_60min_R1 1 SPRSPQLSDFGLER 14 1 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 S(0.499)PRS(0.499)PQLS(0.003)DFGLER 46.621 0.009270100000000002 3153500.0 249.12 386.34 285.88 215.73 389.98 474.68 346.75 456.51 484.4 348.51 426.46 True False 274.41047900754893 418.89822766034797 305.28153593609335 229.0551521416221 362.58915015796345 470.8143634596522 359.94576099888064 447.4045499248331 464.0423525463755 326.5050191229113 374.0081235526755 0.733701921768287 1.1200244093129976 0.8162430618785673 0.6124336283550319 0.9694686487388454 1.258834591578978 0.9624009168030428 1.1962428667991762 1.2407280038157233 0.8729891105611939 1.0 8.546925795935444 -7.001941165250735 24.986450197304688 1.1194497299456414 0.8353361592464245 0.3709909157458682 0.1598681708138333 55.05162157353453 708637.6351902288 0.021728194195572197 0.04062367271140949 9.955402760653418e-08 7.001941165250735 -0.28411357069921694 S(ph)PS(ph)ASITDEDSNV ddPTM_A549_PD325901_60min_R1 1 SPSASITDEDSNV 13 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;H0YFE4 Q86W92-2 PPFIBP1 Liprin-beta-1 2 S(0.85)PS(0.896)AS(0.247)IT(0.006)DEDS(0.001)NV 43.382 0.043432 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PS(ph)HSGNAGDLK ddPTM_A549_MK2206_60min_R1 2 SPSHSGNAGDLK 12 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 2 S(0.963)PS(0.854)HS(0.183)GNAGDLK;S(0.946)PS(0.82)HS(0.235)GNAGDLK 53.169 0.0081262 17102800.0 1746.19 2139.8 2051.3999999999996 1781.24 3109.6000000000004 2297.3599999999997 2344.6400000000003 2612.2 3569.7 3456.1 3183.5 True False 2040.9041817533605 2248.7066801752326 2342.319366670618 2217.6438799629022 2652.181959262213 2540.4651103358538 2770.6307384882566 2982.4873495269903 2761.1686496395378 2675.364609634304 2392.9490898697486 0.8528824079013104 0.9397219062013695 0.9788421227123196 0.9267409362577002 1.1083319617997283 1.0616461173748308 1.157831042130138 1.2463647313488524 1.1538768882834158 1.118019861333501 1.0 11.224573988444583 -6.7592929575166645 24.956310728426466 1.0953489939136336 0.9295089806826428 0.6538952016918961 0.06705660824445221 38.43237380479385 446839.01302027557 0.012200475184044888 0.024447532238140446 1.7406323170237751e-07 6.7592929575166645 -0.16584001323099085 S(ph)PS(ph)PAPPPR ddPTM_A549_MK2206_60min_R1 4 SPSPAPPPR 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR 74.16199999999999 0.0025047 45371700.0 2451.85 2426.3 1989.29 2304.14 2976.73 2087.85 2145.62 2249.88 3379.69 2963.57 3587.3 True False 2865.6623380227657 2549.788306434792 2271.4012347295497 2868.654403436775 2538.8569602503876 2308.784901197335 2535.451380644863 2568.8073799685258 2614.1956112559164 2294.097478711246 2696.4744055566975 1.062744126967205 0.945600781961948 0.8423596493439033 1.0638537482593053 0.9415468416902073 0.856223554890623 0.9402838667483696 0.9526540933134449 0.9694865287312845 0.8507766563568108 1.0 11.396858624777325 -9.381792991409913 1.0781262704330246 0.9928911146136828 0.9472267679714848 0.0 0.07788417049291105 0.8471685661911014 2.062174364696034 0.01654230393204383 0.012992782262452948 4.1515187965567326e-10 9.381792991409913 -0.045664346642198095 S(ph)PS(ph)PAPPPR ddPTM_A549_PD325901_60min_R1 4 SPSPAPPPR 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR 70.808 0.0039027999999999997 62734900.0 4577.280000000001 4565.39 4816.01 4051.73 5111.12 4024.34 4994.6900000000005 5001.71 5252.74 4709.599999999999 5938.12 True False 5041.96209598456 4950.1314375376005 5142.853399620768 4301.996159953527 4752.132563606774 3991.5671093056753 5184.765661149243 4901.946970284412 5031.985604695393 4412.235052254635 5207.7688848440985 0.9681616460857013 0.9505282486601341 0.9875348759403954 0.8260727876141749 0.9125083444921415 0.7664639498350488 0.9955829023515617 0.9412758282246925 0.9662459521465557 0.8472409490166385 1.0 12.346449709339256 S(ph)PS(ph)PAPPPRR ddPTM_A549_PD325901_60min_R1 2 SPSPAPPPRR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(1)PAPPPRR;S(1)PS(1)PAPPPRR 60.301 0.0020033 18629200.0 1434.6999999999998 1119.87 941.97 1059.8600000000001 1511.3600000000001 1027.76 1093.26 1368.67 1389.01 1222.74 1928.28 True False 1580.3496878296817 1214.245375084106 1005.8977487257658 1125.3251450832965 1405.2072875089482 1019.3902633127418 1134.8646075548263 1341.370803149157 1330.63474011239 1145.5359877258868 1691.11378437404 0.9345022803504867 0.7180151840188298 0.5948137600321763 0.6654343164140382 0.8309359786982523 0.6027922383058723 0.6710752511398236 0.7931877887481479 0.7868392726778701 0.6773855185326296 1.0 10.723758017520284 -10.028601483735242 0.5691219006924134 1.0056415748519398 0.7124764868814312 0.0 0.13274862731332068 0.4951888747727877 0.310402577305282 0.06774747622257875 0.0231620353024369 9.362644128037558e-11 10.028601483735242 -0.29316508797050866 S(ph)PS(ph)PASGR ddPTM_A549_MK2206_60min_R1 1 SPSPASGR 8 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)PS(0.998)PAS(0.002)GR 52.278 0.031625 3529800.0 275.25 310.51 167.84 238.69 440.7 209.13 144.46 245.4 334.66 398.55 367.56 True False 321.70547078359874 326.31363270455734 191.64223579116543 297.1690607152012 375.87361379175974 231.25999779074118 170.7065120794722 280.1862015059807 258.86004434220445 308.51727819500377 276.2847078600673 1.1643983964054072 1.1810774299887372 0.6936404018720733 1.0755899702770066 1.3604575392646496 0.8370350989815541 0.61786449710395 1.0141212797339818 0.9369322187506373 1.1166643300115677 1.0 8.110011902106134 S(ph)PS(ph)PASGR ddPTM_A549_PD325901_60min_R1 2 SPSPASGR 8 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)PS(0.998)PAS(0.002)GR;S(0.999)PS(0.98)PAS(0.021)GR 59.908 0.013307 11427300.0 923.66 914.24 1072.85 924.31 1033.4 741.16 997.8599999999999 729.16 871.48 1419.8500000000001 1230.3 True False 1017.4292832374463 991.2862133255593 1145.6600525711415 981.4025294396828 960.8175490364616 735.1242386908148 1035.8341083499442 714.6163317850459 834.8547262533351 1330.200428686883 1078.9808995142726 0.942953933378677 0.9187245240131767 1.0617982700962418 0.9095643211863 0.8904861517650546 0.6813134866629682 0.9600115338614874 0.6623067489950438 0.7737437489664216 1.2328303765948985 1.0 10.075453610637284 -6.590246537495219 3.577053740280831 0.8619132066588172 0.9709928809156891 0.04434321494790361 0.15360164032402773 0.3725675761049504 9.603565012308048 0.017772467446390043 0.03959909399358103 2.568937051121637e-07 6.590246537495219 0.10907967425687193 S(ph)PS(ph)PKPTK ddPTM_A549_PD325901_60min_R1 1 SPSPKPTK 8 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 S(0.995)PS(0.706)PKPT(0.299)K 64.374 0.0092754 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PS(ph)PPPTR ddPTM_A549_MK2206_60min_R1 3 SPSPPPTR 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.999)PS(0.931)PPPT(0.07)R;S(1)PS(1)PPPTR;S(1)PS(1)PPPTR 93.667 0.002942 59430200.0 5770.98 5651.55 5641.76 4709.65 7505.26 5899.76 5547.200000000001 5397.45 8729.58 8054.549999999999 8450.91 True False 6744.980337085312 5939.189755278226 6441.846402509328 5863.51446142422 6401.2461961578065 6524.068687256269 6555.054435880162 6162.555066497379 6752.34406827473 6235.02156087208 6352.315813749383 1.0618143894052023 0.9349644963216471 1.014094165243825 0.9230514718321832 1.0077027628731108 1.0270378360495134 1.031915702568181 0.9701273121778246 1.062973609350388 0.9815351981361784 1.0 12.633066924410581 -6.992022087896349 24.968471722599773 1.0251510250716735 0.9800991538279472 0.046806047393815775 0.04281780434370368 227.6314351998079 712411.8923420189 0.005808500890268474 0.010962649248707967 1.0185395845663472e-07 6.992022087896349 -0.04505187124372634 S(ph)PS(ph)PPPTR ddPTM_A549_PD325901_60min_R1 2 SPSPPPTR 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(1)PPPTR;S(1)PS(1)PPPTR 86.882 0.0031379000000000003 85835000.0 8431.8 8823.9 8906.900000000001 8807.1 10543.4 8696.9 9388.0 8695.400000000001 9694.900000000001 9171.400000000001 10727.3 True False 9287.790128836914 9567.521020479744 9511.375795540751 9351.09456462467 9802.867956755399 8626.075329848009 9745.265477310722 8521.96342559066 9287.457067922915 8592.316238799083 9407.910105957457 0.9872320232902227 1.016965607953802 1.0109977336537024 0.9939608754024116 1.0419814652084993 0.9168960197000224 1.0358586941790227 0.9058295976057658 0.9871966210690867 0.9133076466534361 1.0 13.199658559726991 S(ph)PS(ph)PSPTPEAK ddPTM_A549_PD325901_60min_R1 1 SPSPSPTPEAK 11 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 S(0.993)PS(0.835)PS(0.14)PT(0.032)PEAK 46.068999999999996 0.044098000000000005 8815400.0 7127.4 7890.6 6102.5 9057.2 9001.7 7387.6 6902.4 7291.4 9996.9 7863.1 9240.3 True False 7850.968401085435 8555.56855406311 6516.652347313597 9616.642673606359 8369.451646179137 7327.437834950971 7165.074609138207 7145.967307007357 9576.765058156207 7366.622524074957 8103.801679087807 0.9688006582571216 1.0557475235531868 0.8041475600433418 1.1866828748317595 1.0327809067411966 0.9041975760413442 0.8841621368434985 0.881804317280841 1.1817620219988159 0.9090329225460723 1.0 12.98438315276739 -8.758406204792516 24.999965636251545 1.0858320637636514 0.9674229805925867 0.0002267576745340616 0.11789695204321494 99.8860995727214 823276.8554202737 0.019553446463501305 0.021709436303646464 1.7441900120310088e-09 8.758406204792516 -0.11840908317106469 S(ph)PS(ph)PYYSR ddPTM_A549_MK2206_60min_R1 2 SPSPYYSR 8 0 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 S(1)PS(0.986)PYYS(0.013)R;S(0.999)PS(0.864)PY(0.015)Y(0.003)S(0.118)R 99.568 0.0027716 79785000.0 4725.6 5702.4 4701.0 4130.1 7512.200000000001 5372.200000000001 5139.799999999999 5755.5 7964.5 8044.0 7649.4 True False 5523.165750172474 5992.627803080308 5367.672488407225 5141.974685407233 6407.165331351169 5940.682638222249 6073.635129351177 6571.359750479515 6160.553466693022 6226.854813199371 5749.842867300031 0.9605768153393036 1.0422246209824308 0.9335337699285228 0.8942809054226839 1.1143200743431443 1.0331904323868648 1.0563132366438373 1.1428764058669392 1.0714298823240451 1.0829608663937857 1.0 12.489306815038308 -6.762462321121558 24.999990943426372 1.049196505674187 0.9619719151722461 0.502091750200212 0.051532660063937474 23.656998622915214 578183.4891160905 0.008088190366912695 0.01593013929687074 1.7279758911606421e-07 6.762462321121558 -0.08722459050194087 S(ph)PS(ph)PYYSR ddPTM_A549_PD325901_60min_R1 2 SPSPYYSR 8 0 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 S(1)PS(0.568)PYYS(0.432)R;S(1)PS(0.999)PYYS(0.001)R 114.45 0.0015274000000000002 130746000.0 9467.9 9808.0 9558.4 9677.6 9630.9 11055.2 9896.4 9714.900000000001 10592.599999999999 10496.2 11421.4 True False 10429.074238100402 10634.554581178994 10207.090503328513 10275.363372575735 8954.458808801292 10965.170116539879 10273.012917517868 9521.12869830839 10147.429858758751 9833.468140707306 10016.640206219876 1.0411748873264335 1.0616887860837232 1.0190133910360857 1.0258293360876838 0.8939583158074283 1.0946954159071232 1.0255946810527143 0.9505311663681605 1.0130572377410203 0.9817132230227429 1.0 13.29011105867599 -6.002915359138474 2.6024664275592064 1.0031494444261644 1.051122580447828 0.14911390965062365 0.047609647379089404 0.40879154008108004 5.473019270536698 0.006174701916798074 0.022509186307916595 9.93309618436526e-07 6.002915359138474 0.04797313602166353 S(ph)PSAGDVHILTGFAK ddPTM_A549_MK2206_60min_R1 6 SPSAGDVHILTGFAK 15 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 S(0.5)PS(0.5)AGDVHILTGFAK;S(0.5)PS(0.5)AGDVHILTGFAK;S(0.5)PS(0.5)AGDVHILTGFAK;S(0.5)PS(0.5)AGDVHILTGFAK;S(0.5)PS(0.5)AGDVHILTGFAK;S(0.5)PS(0.5)AGDVHILTGFAK 76.378 0.00019058 38169000.0 3284.31 3589.1099999999997 3064.9799999999996 3144.9200000000005 4797.82 3431.52 3370.16 4039.08 5498.749999999999 5011.370000000001 5627.150000000001 True False 3838.6212343298102 3771.7803686717098 3499.640251758853 3915.4255411808253 4092.067033633724 3794.6411687413774 3982.4744479423634 4611.631959163721 4253.291904699386 3879.298036452379 4229.7733535607185 0.9075240949017688 0.8917216251070615 0.8273824527294771 0.9256821143583809 0.9674435700411536 0.8971263591575097 0.9415337690824088 1.0902787392335207 1.0055602390891392 0.9171408754529835 1.0 12.04636464529945 -8.025363434239319 10.093259390683198 1.0096052487373732 0.9041966795755582 0.48282841051805936 0.048378853744017 0.2629163314869767 102.93641018560025 0.0064443403672629 0.008429657189007388 9.43271180493149e-09 8.025363434239319 -0.10540856916181507 S(ph)PSAGDVHILTGFAK ddPTM_A549_PD325901_60min_R1 4 SPSAGDVHILTGFAK 15 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 S(0.5)PS(0.5)AGDVHILTGFAK;S(0.5)PS(0.5)AGDVHILTGFAK;S(0.5)PS(0.5)AGDVHILTGFAK;S(0.5)PS(0.5)AGDVHILTGFAK 94.01 7.116e-06 10757100.0 3961.84 3783.8199999999997 3836.75 4539.93 4907.55 4228.95 4752.96 5026.31 4339.87 4807.38 5172.0 True False 4364.043080247544 4102.695790717443 4097.134927252019 4820.351165170883 4562.8606181284 4194.510833303904 4933.8364937195065 4926.056303986085 4157.480356204456 4503.841206367397 4535.876788009284 0.9621167602665075 0.9044989496987734 0.9032729764800731 1.0627165133571563 1.0059489777567259 0.9247409110389 1.0877360043734523 1.0860207484048623 0.9165770038540004 0.9929372901559906 1.0 12.14716573628653 -6.1903995695698395 24.9999145241015 0.9840064240734749 0.9214164106706761 0.22218522718425116 0.05916857832307479 235.92695918461393 83024.98980627317 0.009188814285880167 0.024311348969889644 6.450604726052852e-07 6.1903995695698395 -0.0625900134027988 S(ph)PSAGILR ddPTM_A549_MK2206_60min_R1 2 SPSAGILR 8 0 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 S(0.996)PS(0.004)AGILR;S(0.991)PS(0.009)AGILR 76.345 0.0046703000000000005 54142000.0 1667.0100000000002 1649.08 1355.28 1225.8200000000002 2142.02 2000.3600000000001 1461.7199999999998 1724.96 2884.2 2030.46 2029.13 True False 1948.3605335184996 1733.0111282098192 1547.4790831926282 1526.1459550291513 1826.9316955167355 2212.036767468499 1727.2956031898514 1969.4783624684476 2230.933305120978 1571.7776757842857 1525.2410198609703 1.2774115750546087 1.1362211648148486 1.014580032297902 1.000593306340701 1.1977986899954114 1.4502867013569645 1.1324738717998148 1.2912571435090112 1.462675915524704 1.0305110178111767 1.0 10.574821521228348 -6.985062095241664 23.462351216673824 1.2404407189726956 1.1022256210377694 0.11647861595306175 0.15356428291825389 215.31087535576992 338174.99657726806 0.0272835379984446 0.051541642958675034 1.0349941730696705e-07 6.985062095241664 -0.13821509793492615 S(ph)PSAGILR ddPTM_A549_PD325901_60min_R1 2 SPSAGILR 8 0 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 S(0.997)PS(0.003)AGILR;S(0.991)PS(0.009)AGILR 107.56 0.0018184000000000002 53860000.0 4181.9 4018.9 3647.8 3475.6 4807.1 3592.0 3735.6000000000004 3596.5 3577.1000000000004 4134.8 4372.2 True False 4606.44340944793 4357.586807330778 3895.3616440033666 3690.2799183396933 4469.465879594713 3562.747942923803 3877.7603021987547 3524.764986100331 3426.766926700332 3873.728022350616 3834.447117659354 1.201331839532533 1.1364315828642233 1.0158861302489932 0.9624020895592208 1.165608950247563 0.9291425422235571 1.0112958095940152 0.9192368229221894 0.893679537505819 1.0102442160462601 1.0 11.90480285766709 -3.379891178347608 0.4040290900146112 0.9497941075156549 2.3487065162883174 0.5203272581775671 0.06794004182597024 11.203035920964727 0.3729730076828032 0.015572803251583561 10.589848299756307 0.0004169738519842406 3.379891178347608 1.3989124087726625 S(ph)PSAGILRTPIQVESSPQPGLPAGEQLEGLK ddPTM_A549_MK2206_60min_R1 2 SPSAGILRTPIQVESSPQPGLPAGEQLEGLK 31 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 S(0.296)PS(0.296)AGILRT(0.296)PIQVES(0.057)S(0.057)PQPGLPAGEQLEGLK;S(0.306)PS(0.306)AGILRT(0.29)PIQVES(0.049)S(0.049)PQPGLPAGEQLEGLK 58.42100000000001 0.00068886 3808900.0 815.6600000000001 1349.74 1121.63 1070.69 1840.0099999999998 1076.6799999999998 1024.44 1173.65 1891.45 1658.07 1579.98 True False 953.3234670276122 1418.4360007943349 1280.69399982391 1333.0090980651 1569.3469664465076 1190.6135629576581 1210.5674874338538 1340.018481652381 1463.0395950249883 1283.5108354203724 1187.6273607703479 0.8027126172044775 1.194344326889096 1.0783635019937525 1.1224135971408162 1.3214136170023563 1.0025144269035478 1.0193159297446852 1.1283156029540997 1.231901220325537 1.0807353196947485 1.0 10.213866520547084 -5.252270902035761 24.061662210020927 1.1163531508250966 0.8027123351400575 0.47380865231468683 0.0954839326804656 547.7772631225881 1437528.231043323 0.01474698155385545 0.2452602809095253 5.594085475801491e-06 5.252270902035761 -0.3136408156850391 S(ph)PSAGILRTPIQVESSPQPGLPAGEQLEGLK ddPTM_A549_PD325901_60min_R1 1 SPSAGILRTPIQVESSPQPGLPAGEQLEGLK 31 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 S(0.328)PS(0.328)AGILRT(0.328)PIQVES(0.009)S(0.009)PQPGLPAGEQLEGLK 67.209 0.00017832 3533300.0 1209.5 1044.8 1170.5 951.13 1119.7 1130.4 1047.0 1255.0 1434.9 1356.4 894.53 True False 1332.2875496131596 1132.8489627259187 1249.9371687882933 1009.8791399270436 1041.0561347552987 1121.194397182925 1086.844157940384 1229.9680404715455 1374.5961429991626 1270.7566725153276 784.5084808928734 1.6982449292286068 1.4440238573795763 1.5932742592734002 1.2872762557998976 1.3270170560430914 1.4291679752229816 1.3853822927489745 1.567819941311126 1.7521749942520597 1.6198125367224074 1.0 9.615645233240826 -10.989920422837994 1.272673179916099 1.0007821262045287 1.5122725357213103 0.0 0.22732433853848186 0.2570321045961148 0.7426672436625934 0.11296086931261451 0.02604113804516839 1.0234805106962164e-11 10.989920422837994 0.5114904095167816 S(ph)PSAIPEQNHSLNDQAK ddPTM_A549_MK2206_60min_R1 4 SPSAIPEQNHSLNDQAK 17 0 Q13129 Q13129 RLF Zinc finger protein Rlf 1 S(0.909)PS(0.091)AIPEQNHSLNDQAK;S(0.963)PS(0.037)AIPEQNHSLNDQAK;S(0.98)PS(0.02)AIPEQNHSLNDQAK;S(0.968)PS(0.032)AIPEQNHSLNDQAK 180.52 8.8917e-32 54647400.0 12001.699999999999 15221.4 12546.6 13885.2 19656.4 14658.900000000001 11851.5 14171.300000000001 25457.800000000003 20192.5 21712.6 True False 14027.293546606774 15996.104244143977 14325.896541810273 17287.074623330318 16764.969598675623 16210.095068209697 14004.764141699188 16180.125172786089 19691.648947752852 15631.000225699696 16320.76218272527 0.8594753964036055 0.9801076729783534 0.8777712940988464 1.059207555982149 1.0272173205501718 0.993219243484063 0.8580949826303178 0.9913829385929024 1.206539788233389 0.9577371479773381 1.0 13.994420812567308 -8.54306186639319 23.311053769011657 1.097607929791309 0.9554386198171232 0.17013052388298455 0.08719379800942818 94.29057710613168 108902.70598365045 0.015834962315582297 0.01795668066095461 2.8637699892681194e-09 8.54306186639319 -0.14216930997418586 S(ph)PSAIPEQNHSLNDQAK ddPTM_A549_PD325901_60min_R1 2 SPSAIPEQNHSLNDQAK 17 0 Q13129 Q13129 RLF Zinc finger protein Rlf 1 S(0.978)PS(0.022)AIPEQNHSLNDQAK;S(0.996)PS(0.004)AIPEQNHSLNDQAK 197.46 1.3148999999999998e-48 80217000.0 12357.4 13950.0 13512.699999999999 16111.6 18737.2 15382.5 12974.099999999999 14889.0 19694.4 16913.2 18043.7 True False 13611.914150962933 15125.615457529258 14429.753080466107 17106.77693990153 17421.163711830846 15257.230020051615 13467.836475199925 14592.027214805454 18866.712857120867 15845.297665575223 15824.439288438332 0.8601830309973816 0.9558389514995549 0.9118650473137957 1.0810352662795515 1.1009024328943595 0.964156122182406 0.8510782739101416 0.9221197003464568 1.1922515871323973 1.0013181116093086 1.0 13.949866760712018 -8.743027297804117 24.99996921970913 1.0907854832543247 0.9602137428525402 0.21348869562234252 0.08876583160913946 247.92763867100047 336636.74081422796 0.017381464511207992 0.01969159339240262 1.8070605387170638e-09 8.743027297804117 -0.13057174040178443 S(ph)PSAPAATSSASSSTSSYK ddPTM_A549_MK2206_60min_R1 2 SPSAPAATSSASSSTSSYK 19 0 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.998)PS(0.002)APAATSSASSSTSSYK;S(0.892)PS(0.108)APAATSSASSSTSSYK 252.05 4.281799999999999e-97 18023500.0 4184.200000000001 3597.9 3078.2 3028.9 4831.0 3797.7999999999997 3445.3 4407.4 5521.1 4540.2 4983.9 True False 4890.390666131637 3781.017742126587 3514.7350465465047 3770.9806359724885 4120.366299587002 4199.680675224389 4071.26641331445 5032.162447096417 4270.579665385002 3514.5656666941545 3746.260081357572 1.3054060743052986 1.0092779625584403 0.9381983552174608 1.0065987288864253 1.0998612509823027 1.1210328658501751 1.0867548768368218 1.343249624375481 1.1399581376201267 0.938153142165331 1.0 11.871235345764635 -6.8215067074859075 24.902232919835182 1.0965958133569107 1.0518507945472015 0.01567509401779188 0.12753796742635448 256.4217554218806 106303.83077068113 0.01840429541494248 0.03478085802479758 1.5083193150368573e-07 6.8215067074859075 -0.04474501880970916 S(ph)PSAPAATSSASSSTSSYK ddPTM_A549_PD325901_60min_R1 2 SPSAPAATSSASSSTSSYK 19 0 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.999)PS(0.001)APAATSSASSSTSSYK;S(0.999)PS(0.001)APAATSSASSSTSSYK 224.19 1.0720999999999997e-74 32103000.0 6184.7 6890.9 6409.700000000001 5622.8 7727.7 7096.4 6332.4 7482.9 7745.1 8305.5 7243.6 True False 6812.566191064498 7471.620326615648 6844.700786657264 5970.107585694679 7184.933011117735 7038.609271203921 6573.382947222241 7333.6476892785095 7419.600381310768 7781.089312574499 6352.683120963656 1.072391942324849 1.176136159217439 1.0774503711778045 0.939777330620114 1.1310076190338663 1.1079742428796315 1.0347411986488484 1.1544173618667837 1.1679475018715035 1.2248508487535208 1.0 12.633150342331257 -5.883493966568451 17.730053999961296 1.07877246937346 1.1249676672994824 0.0 0.08059063465605813 3.223280801638845 481.57636908636414 0.010887607367999583 0.033852257760811834 1.3076937059151648e-06 5.883493966568451 0.04619519792602245 S(ph)PSAPAATSSASSSTSSYKR ddPTM_A549_MK2206_60min_R1 1 SPSAPAATSSASSSTSSYKR 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.989)PS(0.011)APAATSSASSSTSSYKR 145.05 2.544e-21 8079000.0 1494.7 2093.3 1792.6 1681.0 3118.9 2051.9 1411.0 1558.9 3724.3 3434.4 3141.6 True False 1746.9688180935318 2199.840028792791 2046.8176351241855 2092.845075462958 2660.1139415818475 2269.0306960590133 1667.3604357201664 1779.878848931025 2880.751996485005 2658.566654705609 2361.45401625092 0.7397852365836222 0.9315616622869033 0.8667615888509842 0.8862527328758195 1.126472894782463 0.9608616896387254 0.7060736411743866 0.7537215786046884 1.2199060310556162 1.1258176684407302 1.0 11.20545972733978 -8.762985412599539 24.999998497793133 1.103844513435652 0.879748577022845 0.4447713917936703 0.1208756717965312 33.12313667143083 535612.6407625085 0.023748149079559588 0.02594359364376582 1.7258958616682018e-09 8.762985412599539 -0.224095936412807 S(ph)PSAPAATSSASSSTSSYKR ddPTM_A549_PD325901_60min_R1 2 SPSAPAATSSASSSTSSYKR 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.986)PS(0.014)APAATSSASSSTSSYKR;S(0.973)PS(0.027)APAATSSASSSTSSYKR 185.55 4.0853e-44 17419600.0 3919.7000000000003 3008.0 4366.2 3573.7 4450.1 4818.5 4356.0 4937.3 4233.9 4581.4 5181.6 True False 4317.625058469371 3261.4947165769186 4662.5165880935065 3794.4393325384276 4137.5403280115725 4779.259733568581 4521.769963694662 4838.821678263079 4055.963906783859 4292.129622133382 4544.296048868695 0.9501196691496906 0.7177117603041883 1.026015149090967 0.8349894662965577 0.9104909283015606 1.0517051886965816 0.9950429978743042 1.0648121570925615 0.8925395403747063 0.9445092432307333 1.0 12.149841110332574 -7.011361414629038 24.217117034287455 0.9684488826545437 0.8797322055019556 0.2529316232192471 0.08467111759621637 466.46568292872183 994286.4356579853 0.012315682662352098 0.02217824353340979 9.741786006164237e-08 7.011361414629038 -0.08871667715258802 S(ph)PSASITDEDSNV ddPTM_A549_MK2206_60min_R1 2 SPSASITDEDSNV 13 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;H0YFE4 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.904)PS(0.096)ASITDEDSNV;S(0.917)PS(0.083)ASITDEDSNV 265.72 1.2065999999999998e-82 7696400.0 1303.6 1731.79 1187.54 1363.54 1868.67 1592.21 1597.88 1669.12 2248.3999999999996 1897.71 2249.7 True False 1523.6158100399598 1819.9307139268458 1355.951028905152 1697.6073612116356 1593.7911184121797 1760.6966053765407 1888.194112706264 1905.7228714656173 1739.1409899570085 1469.0159929831648 1691.0374014386598 0.9009947436666598 1.0762214439364435 0.8018456763591206 1.0038851652644623 0.9424931211197651 1.041193177559892 1.1165892079618533 1.1269548916211507 1.0284462002303583 0.8687069793568084 1.0 10.723692853501264 -7.260428590400396 24.67582252808106 1.033537240926288 0.9476818162868341 0.1844623923190134 0.08901420648155922 86.51594003582726 2112051.069944359 0.010896854698695686 0.01819568274041141 5.489988182388057e-08 7.260428590400396 -0.08585542463945384 S(ph)PSASITDEDSNV ddPTM_A549_PD325901_60min_R1 1 SPSASITDEDSNV 13 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;H0YFE4 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.919)PS(0.081)ASITDEDSNV 272.32 3.473299999999999e-83 6206300.0 1369.0 1200.3 621.29 1434.4 1315.2 707.92 1112.3 1015.3 1327.8 1258.8 1231.8 True False 1507.9798721954667 1301.4534934532167 663.4544755202726 1522.9996302412396 1222.8248891936848 702.1549342301282 1154.6291851739154 995.0490450125579 1271.9971835488805 1179.3191531718473 1080.2964090235557 1.3958945522724453 1.204718892502436 0.6141411467987264 1.409797919830011 1.1319346051505956 0.6499650728866005 1.068807760101273 0.9210889129141417 1.1774520149507826 1.0916625690145494 1.0 10.07721149441867 -5.525115691567895 24.986830706188876 1.0416418881344938 1.3481007928131001 0.2190640080011853 0.21744278320611235 66.35039894602613 741155.4683417869 0.028240624144154982 0.11081598773684234 2.9845874497157e-06 5.525115691567895 0.30645890467860637 S(ph)PSASSLSSMSSVASSVSSRPSR ddPTM_A549_MK2206_60min_R1 1 SPSASSLSSMSSVASSVSSRPSR 23 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 S(0.917)PS(0.07)AS(0.008)S(0.003)LS(0.001)S(0.001)MSSVASSVSSRPSR 57.141999999999996 0.00098141 5556600.0 1430.2 1889.3 1460.9 1554.2 2227.0 1760.8 1504.0 1543.2 2689.5 2120.9 2422.0 True False 1671.582794967131 1985.4573001472415 1668.0775873886648 1934.9790697706903 1899.4112500890606 1947.126687275555 1777.2573319086678 1761.9533258517922 2080.3325442489668 1641.7872169709779 1820.550556200575 0.9181743342825179 1.0905807000992167 0.9162489784792816 1.062853796166432 1.043316948062714 1.0695262928260227 0.9762197077447502 0.9678134561277588 1.1426941905917447 0.9018080884264648 1.0 10.830159089255075 -2.4681554080133834 0.39235488081840253 1.056366864304216 1.1651196721569861e-11 0.0 0.07966429228695188 61.8490579269787 1.044634272544541 0.016735346048716043 48.37422796743936 0.003402863997668097 2.4681554080133834 -1.0563668642925648 S(ph)PSASSLSSMSSVASSVSSRPSR ddPTM_A549_PD325901_60min_R1 1 SPSASSLSSMSSVASSVSSRPSR 23 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 S(0.906)PS(0.074)AS(0.009)S(0.003)LS(0.003)S(0.003)MS(0.001)SVASSVSSRPSR 43.841 0.013285 8521000.0 2387.7 2292.7 2314.6 2357.7 2550.9 2265.4 2531.2 2511.7 2456.5 2560.0 2669.9 True False 2630.0975462681636 2485.9138752313506 2471.6826748204903 2503.3297742748 2371.7335841272607 2246.9513334909766 2627.526201125788 2461.602173109467 2353.2618477088618 2398.3611631076656 2341.5192258905595 1.1232440533422687 1.0616670782559443 1.0555893146170625 1.0691049411830895 1.0129037412559403 0.9596125919642554 1.122145900863338 1.0512842029615348 1.0050149585313937 1.0242756653836516 1.0 11.19322916851717 -2.0000000000000004 0.21196748058295298 0.9977240418338811 1.5347131791579285 0.2777378261516822 0.040877850799834435 37.88898354587577 0.432850522822515 0.027930296158503762 6.9736210852674505 0.00999999999999999 2.0000000000000004 0.5369891373240474 S(ph)PSDRELR ddPTM_A549_PD325901_60min_R1 2 SPSDRELR 8 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(0.999)PS(0.001)DRELR;S(0.982)PS(0.018)DRELR 61.353 0.0030318000000000003 36854000.0 781.8399999999999 819.8399999999999 735.02 813.71 840.3800000000001 1027.21 677.96 1088.92 932.1600000000001 900.3699999999999 898.0699999999999 True False 861.2118212398126 888.9307940287298 784.90287723432 863.9710186305074 781.3546079536114 1018.8447423303903 703.7601387939474 1067.2006363587861 892.9845568737195 843.5204845418949 787.6130833347822 1.0934452962530925 1.128638938125513 0.9965589625695562 1.0969485359136277 0.9920538707220655 1.2935853452517128 0.8935353585217268 1.3549808388659823 1.1337858344008085 1.0709833322859477 1.0 9.621343266358828 -4.876929846536474 16.47500916481472 1.0837393057815872 2.1280425495977107 0.0 0.12850949887873256 2231.097364590558 316984.1086816935 0.01605588953432297 5369.005331063499 1.327608894808967e-05 4.876929846536474 1.0443032438161235 S(ph)PSDSGYSYETIGK ddPTM_A549_MK2206_60min_R1 2 SPSDSGYSYETIGK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.999)PS(0.001)DSGYSYETIGK;S(1)PSDSGYSYETIGK 256.96 6.694799999999998e-70 58243000.0 18064.0 18947.0 17435.7 15991.1 33606.0 22914.8 19378.7 22357.8 34456.0 26524.1 26723.2 True False 21112.761577601916 19911.321370819758 19908.34443865601 19908.920217867766 28662.601917599008 25339.628926386817 22899.558948044225 25527.086617890876 26651.771014925587 20532.287388212513 20087.091917200327 1.0510611324242172 0.9912495772357143 0.9911013759840838 0.9911300401239268 1.4269164514080597 1.261488175134441 1.1400136486872756 1.2708204215480465 1.3268108258171512 1.0221632615038203 1.0 14.293981094426215 S(ph)PSDSGYSYETIGK ddPTM_A549_PD325901_60min_R1 2 SPSDSGYSYETIGK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.99)PS(0.01)DSGYSYETIGK;S(0.989)PS(0.011)DSGYSYETIGK 128.9 1.1171e-08 55115000.0 9641.3 10907.4 11636.8 9926.4 12860.4 9815.7 11154.599999999999 10370.2 10864.3 11392.4 13655.5 True False 10620.077678450074 11826.604877523636 12426.543225763024 10539.531183509931 11957.129869971472 9735.764193584964 11579.094407031327 10163.358225735486 10407.711252620953 10673.081919760854 11975.96006934663 0.886782990002861 0.9875287500160193 1.0376239695028455 0.8800573083478004 0.9984276668203533 0.812942272453328 0.9668614741517794 0.848646636001181 0.8690502633905964 0.891208876612691 1.0 13.547853695783564 -6.277543849823124 24.926773606556708 0.9248319460117778 0.9723336008802519 0.11323736542082108 0.06688936531932836 1558.7693384077038 2412686.8940996747 0.010130635017109573 0.023617577738633204 5.277839148318069e-07 6.277543849823124 0.04750165486847413 S(ph)PSDSSTASTPVAEQIER ddPTM_A549_PD325901_60min_R1 1 SPSDSSTASTPVAEQIER 18 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 S(0.785)PS(0.204)DS(0.011)STASTPVAEQIER 245.18 6.647299999999999e-75 22237000.0 3627.4 3846.5 3123.4 3103.2 4108.5 3573.7 3112.9 3266.3 4027.8 4069.0 3772.4 True False 3995.6509776492567 4170.658054292924 3335.372706529994 3294.8776161214546 3819.933133555547 3544.596972056459 3231.3631129442424 3201.15108413722 3858.5255730518015 3812.0826455801166 3308.4187152138857 1.2077222750781538 1.2606197743695498 1.0081470918998734 0.9959070781971575 1.15460993978466 1.0713870513899886 0.9767092351656397 0.9675773714544077 1.166274859741371 1.1522370575556575 1.0 11.691926118970176 -5.756012533623754 24.99968671733418 1.0613691893235504 1.234171084689808 0.481462786327859 0.07154384235376306 93.67238823072873 431503.3966979394 0.010852241124946316 0.039705528693613 1.7538298860452574e-06 5.756012533623754 0.17280189536625756 S(ph)PSEGQTATTSPR ddPTM_A549_MK2206_60min_R1 2 SPSEGQTATTSPR 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.992)PS(0.007)EGQTATTSPR;S(0.993)PS(0.006)EGQTATTSPR 67.115 0.0045502 4157400.0 812.47 1007.64 882.1 670.28 913.1300000000001 1015.0799999999999 934.98 1038.22 1086.65 1109.37 1444.76 True False 949.595073015624 1058.9245720215774 1007.1950440382933 834.498630090013 778.8097866159967 1122.4950918444297 1104.8537634228494 1185.3908644154014 840.5255100234757 858.7625465090739 1085.986218652494 0.8744080327224539 0.9750810404716783 0.9274473531423209 0.7684246961489712 0.7171451840174861 1.0336181735687553 1.0173736502786992 1.0915339845529992 0.7739743797728951 0.7907674441528713 1.0 10.084790079878157 -7.281042467108198 24.909190019995833 0.9264171562024308 0.8588039695232459 0.13877179547486707 0.11313474935970592 1933.2078086456015 2456477.09267125 0.01939722634133284 0.03103660378484182 5.2354923927562825e-08 7.281042467108198 -0.06761318667918492 S(ph)PSELFAQHIVTIVHHVK ddPTM_A549_MK2206_60min_R1 2 SPSELFAQHIVTIVHHVK 18 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.5)PS(0.5)ELFAQHIVTIVHHVK;S(0.5)PS(0.5)ELFAQHIVTIVHHVK 93.75399999999999 4.6375e-06 5948500.0 902.51 1036.75 943.28 660.99 1245.81 1113.44 1012.69 934.1800000000001 1337.24 1216.87 1595.19 True False 1054.8316237489762 1089.5161466827149 1077.0512879950581 822.9325796729686 1062.5529993145274 1231.2634817583455 1196.682664528316 1066.6028758062644 1034.3572751334773 941.978221847081 1199.0602979957039 0.8797152449398801 0.9086416658977883 0.8982461430800515 0.6863145923925146 0.8861547672712072 1.0268570177967455 0.9980170859869498 0.8895323092501274 0.8626399163265293 0.7855970408007422 1.0 10.227688495067298 -7.004555463476885 24.99838610964127 0.9414259806091421 0.8436318908198039 0.1634510762479766 0.08547967054388934 226.82387418231028 1244724.0178526498 0.011787669125201006 0.02188331203693696 9.895654790100824e-08 7.004555463476885 -0.09779408978933812 S(ph)PSELFAQHIVTIVHHVK ddPTM_A549_PD325901_60min_R1 2 SPSELFAQHIVTIVHHVK 18 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.5)PS(0.5)ELFAQHIVTIVHHVK;S(0.848)PS(0.152)ELFAQHIVTIVHHVK 121.19 3.3317e-10 6486700.0 1011.24 1219.28 1281.94 1544.73 1519.8899999999999 1407.01 1713.5900000000001 1519.01 1663.8 1555.45 1584.71 True False 1113.900340364458 1322.0330046635313 1368.9401573314533 1640.1444637636296 1413.138169735851 1395.5517770526785 1778.8016051624272 1488.7121539097072 1593.8762720203551 1457.2386215452423 1389.800716304368 0.8014820594757217 0.9512392598119833 0.984990251675517 1.180129240489207 1.0167919422962595 1.0041380470457686 1.279896883268599 1.0711695111716129 1.146837998658287 1.0485234353743889 1.0 10.440662314221543 -5.465031264830801 1.3911021397157173 1.0832607587700538 0.750102604743196 0.5292205516744439 0.08292638982093216 0.5646420453209918 1.2577145675261825 0.012675754038123774 0.23506518851879146 3.4274311160453135e-06 5.465031264830801 -0.3331581540268578 S(ph)PSFGAGEGLLR ddPTM_A549_PD325901_60min_R1 3 SPSFGAGEGLLR 12 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.763)PS(0.237)FGAGEGLLR;S(0.843)PS(0.157)FGAGEGLLR;S(0.5)PS(0.5)FGAGEGLLR 142.91 9.8025e-12 18464000.0 4057.76 4755.6 4025.82 3782.31 5318.3 4860.64 4362.68 4575.1 4132.87 4678.89 4761.47 True False 4469.700808034969 5156.3711017796495 4299.036354422287 4015.9346984507447 4944.760955138973 4821.056559380053 4528.704174750097 4483.84604140348 3959.1798463425666 4383.464086895639 4175.839375445196 1.070371823762604 1.2348106903010168 1.0295023270534578 0.961707177260044 1.1841358133205975 1.1545119737432594 1.0845015259398672 1.0737592225815549 0.94811593319977 1.0497204736061736 1.0 12.027850504063798 -8.638826845348634 4.447755022232439 0.9756271519182135 1.103218164515311 0.2548180421081432 0.07409889632688654 0.16345086419815777 5.652706351060785 0.012316815218443702 0.013953407072342447 2.2970643127264554e-09 8.638826845348634 0.1275910125970975 S(ph)PSFGDPQLS(ph)PEAR ddPTM_A549_MK2206_60min_R1 1 SPSFGDPQLSPEAR 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 2 S(0.937)PS(0.067)FGDPQLS(0.995)PEAR 60.918 0.0078165 1477500.0 526.46 738.29 453.48 462.94 778.56 553.27 527.45 413.07 617.67 759.8 603.95 True False 615.3135772887675 775.8658075084458 517.7902829276557 576.360320782166 664.0348553521953 611.8166641690974 623.2808375766134 471.62393747382066 477.76873121630746 588.1606522959821 453.97254682796734 1.3553982098436017 1.709058869153292 1.1405762012386005 1.2695928967717456 1.4627202900087062 1.3476952922462622 1.372948302560695 1.0388820662597078 1.0524176727306764 1.2955863882202228 1.0 8.826461245544898 -8.263734371466585 5.369566247676204 1.0257624700858756 1.3819527462157586 0.41385399331773065 0.15388314379666418 0.08314035988627186 8.460586912646008 0.020785263892542302 0.02602040276333349 5.448357901214264e-09 8.263734371466585 0.35619027612988297 S(ph)PSFGDPQLS(ph)PEAR ddPTM_A549_PD325901_60min_R1 2 SPSFGDPQLSPEAR 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 2 S(0.978)PS(0.022)FGDPQLS(1)PEAR;S(0.977)PS(0.029)FGDPQLS(0.993)PEAR 77.562 0.00081933 3271700.0 1168.15 998.41 1037.92 1149.76 765.84 1219.52 967.74 969.6800000000001 1180.29 1280.75 1112.51 True False 1286.7397280534221 1082.5495146201993 1108.3594927199877 1220.778063905583 712.0500404045716 1209.588633450568 1004.5678752676477 950.3389717007559 1130.6865158690382 1199.8832264258383 975.6783227819426 1.318815533776084 1.1095352734019301 1.1359886417889582 1.2512095794285865 0.7298000004492361 1.2397412192183168 1.0296097103021953 0.974028990406452 1.158872232238513 1.2297938761257114 1.0 9.930261765204426 -2.0000003313484167 0.7689786889523499 1.0638557744359236 51.02108174151297 0.17930833336552543 0.1443534997522994 447.7005658412378 1.669116520930136 0.02007851391241361 38869.656777926706 0.009999992370423661 2.0000003313484167 49.95722596707705 S(ph)PSFGDPQLS(ph)PEARPR ddPTM_A549_MK2206_60min_R1 2 SPSFGDPQLSPEARPR 16 1 O95425-3;O95425-2 O95425-3 SVIL Supervillin 2 S(0.895)PS(0.122)FGDPQLS(0.983)PEARPR;S(0.962)PS(0.038)FGDPQLS(1)PEARPR 117.23 4.3149e-08 21192500.0 3235.0 3037.3 3390.4 3164.3 4681.3 3356.9 2778.5 2924.2 4964.8 4514.1 4981.9 True False 3780.9889118435653 3191.8855966427873 3871.2097010627244 3939.553642050825 3992.6869712806124 3712.124929870122 3283.317484513451 3338.714304986918 3840.2807271564498 3494.361674821391 3744.7567365547648 1.0096754416475486 0.8523612670176735 1.0337680050812321 1.0520185740223214 1.0662073005452277 0.9912860009393655 0.8767772422873468 0.8915704116093233 1.0255087305589758 0.9331344919446647 1.0 11.870656287360791 S(ph)PSFGDPQLS(ph)PEARPR ddPTM_A549_PD325901_60min_R1 2 SPSFGDPQLSPEARPR 16 1 O95425-3;O95425-2 O95425-3 SVIL Supervillin 2 S(0.939)PS(0.061)FGDPQLS(1)PEARPR;S(0.942)PS(0.058)FGDPQLS(1)PEARPR 100.28 3.8279000000000005e-07 48353000.0 4523.700000000001 4258.8 4077.2 4771.3 4772.0 4324.8 3940.3 4437.1 4849.700000000001 4951.4 5202.0 True False 4982.942693828071 4617.704022259897 4353.9033101953255 5066.012364591488 4436.831182506285 4289.580262682869 4090.2502727148944 4348.5985596623905 4645.883974286044 4638.767758988791 4562.186978194948 1.092226758272761 1.0121689541288628 0.9543456528644885 1.1104350586253002 0.9725228719717531 0.9402464833609391 0.8965547208530288 0.9531828880417643 1.0183458057486743 1.0167859803116053 1.0 12.155509860419265 -5.290753100883817 3.834616273320936 0.994474199769448 1.099257768899003 0.23974847363509055 0.05301787580506011 0.27144532928169235 7.640268906871997 0.00740985281181323 0.07546939340504982 5.119728125520068e-06 5.290753100883817 0.10478356912955511 S(ph)PSFGDPQLSPEAR ddPTM_A549_MK2206_60min_R1 2 SPSFGDPQLSPEAR 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 S(0.998)PS(0.002)FGDPQLSPEAR;S(0.993)PS(0.007)FGDPQLSPEAR 115.0 4.116e-06 7316300.0 2520.91 2908.7 2993.0 2363.1 3519.1 2853.2 2310.2 2050.1000000000004 4051.8 3915.6 4048.6 True False 2946.37797766787 3056.7404059377986 3417.4524054037083 2942.0596060835906 3001.4450517235796 3155.1237301991237 2729.933436286836 2340.707953167935 3134.0737693950414 3031.063240497693 3043.220884324378 0.9681774966926174 1.0044425042175085 1.1229721848344942 0.9667584831709493 0.986272494114382 1.0367711875438148 0.8970539898528941 0.769154800831223 1.029854186903963 0.9960050077569759 1.0 11.571383336606688 S(ph)PSFGDPQLSPEAR ddPTM_A549_PD325901_60min_R1 2 SPSFGDPQLSPEAR 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 S(0.996)PS(0.004)FGDPQLSPEAR;S(0.974)PS(0.026)FGDPQLSPEAR 85.81299999999999 0.00014902 15474800.0 5302.0 5189.5 5729.200000000001 5331.1 5961.8 6071.6 5507.0 5759.8 6173.9 5847.1 6355.5 True False 5840.255136873896 5626.837377551836 6118.017964478334 5660.389939193442 5543.063735093459 6022.154902632561 5716.571898546032 5644.916270524314 5914.432453315584 5477.91310812767 5573.81379083391 1.047802340738068 1.0095129813638772 1.0976358726836843 1.0155326588954057 0.994483121091878 1.0804370451944312 1.0256122850653686 1.0127565222590198 1.0611105205993459 0.9827944229382136 1.0 12.44444909056132 -11.032384581774487 1.309383500633673 0.999878977173519 1.040057749592502 0.2439138342266246 0.0307294445711864 0.5885621344471912 1.7891977264399117 0.020999992128282238 0.004656847314644555 9.281441212001674e-12 11.032384581774487 0.040178772418983044 S(ph)PSFGDPQLSPEARPR ddPTM_A549_MK2206_60min_R1 1 SPSFGDPQLSPEARPR 16 1 O95425-3;O95425-2 O95425-3 SVIL Supervillin 1 S(0.938)PS(0.061)FGDPQLSPEARPR 52.81399999999999 0.0046933 3014300.0 411.88 310.71 382.99 490.33 564.78 491.33 354.36 434.7 784.15 448.96 1052.3 True False 481.3952745008124 326.52381185028804 437.3037409774694 610.4608720117502 481.70161015954216 543.3222144815419 418.74262508986396 496.32005621291694 606.5412770302383 347.53962418373794 790.9848679974665 0.6086023816353896 0.4128066478401125 0.5528598063886982 0.7717731358847 0.6089896654775007 0.6868933104334458 0.5293939770933838 0.627470987491137 0.7668178009091586 0.4393758189882984 1.0 9.627506285137986 -9.769733339128926 0.3400456095157103 1.0746141071042379 0.547470277881212 0.0 0.18957649788870687 0.6331815279440112 0.15415434744320264 0.12703282870023963 0.046354713838659876 1.6992867101280007e-10 9.769733339128926 -0.5271438292230258 S(ph)PSFGGASEASAR ddPTM_A549_MK2206_60min_R1 1 SPSFGGASEASAR 13 0 H7C2F7;Q8WVT3 H7C2F7 TRAPPC12 Trafficking protein particle complex subunit 12 1 S(0.999)PS(0.001)FGGASEASAR 70.488 0.0027527 5409700.0 2464.8 2540.3 1766.5 2144.2 2758.7 1914.4 1808.9 2005.2 3055.6 2977.1 3359.4 True False 2880.797981425664 2669.590419501424 2017.016262661426 2669.5290962567947 2352.898884427792 2116.980537324127 2137.553715219141 2289.4432406674528 2363.5114787905327 2304.5710423142514 2525.168265276717 1.1408340667983072 1.0571930814316963 0.798765092369159 1.0571687966165129 0.9317790488587313 0.8383522660388497 0.8464995163341719 0.9066497754424168 0.93598177645858 0.9126405847895875 1.0 11.302163810107531 -5.533442698483513 24.883152545918254 0.9422858459486754 1.1199238711166606 0.46424173465673935 0.0737567094051823 119.02294889572788 280356.7399846962 0.010448176759808935 0.04055064627919555 2.927907158692098e-06 5.533442698483513 0.17763802516798521 S(ph)PSFGGASEASAR ddPTM_A549_PD325901_60min_R1 1 SPSFGGASEASAR 13 0 H7C2F7;Q8WVT3 H7C2F7 TRAPPC12 Trafficking protein particle complex subunit 12 1 S(0.997)PS(0.003)FGGASEASAR 49.31 0.052592999999999994 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PSFGPK ddPTM_A549_MK2206_60min_R1 2 SPSFGPK 7 0 Q9H5Y7 Q9H5Y7 SLITRK6 SLIT and NTRK-like protein 6 1 S(0.592)PS(0.408)FGPK;S(0.73)PS(0.27)FGPK 72.547 0.01968 18768400.0 6774.5 7400.9 7351.900000000001 6047.200000000001 10146.0 7415.3 7250.7 7360.2 11435.6 10469.9 11035.2 True False 7917.86997937689 7777.574198200243 8394.509969691784 7528.764271469121 8653.53684032493 8199.982124122233 8568.058335419 8403.530889667154 8845.454858900712 8104.742318338654 8294.855283973817 0.9545519130001838 0.9376383230249967 1.0120140354842002 0.9076426307298173 1.0432414483522225 0.9885624092761588 1.0329364457958692 1.0131015674141182 1.0663784425498886 0.9770806169454851 1.0 13.01800109611272 -6.778852058619774 24.97611902673685 1.028133427519206 0.9560852103912002 0.43237219840368435 0.03400677601968611 142.51296370841092 204415.30587749713 0.0047854942776318615 0.009058830246837075 1.6639793844480097e-07 6.778852058619774 -0.0720482171280058 S(ph)PSGAGEGASCSDGPR ddPTM_A549_PD325901_60min_R1 1 SPSGAGEGASCSDGPR 16 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 S(0.94)PS(0.06)GAGEGASCSDGPR 67.095 0.0023405 6359800.0 458.37 422.93 316.28 500.13 526.93 360.88 486.09 449.59 454.55 517.73 479.92 True False 504.9033849658404 458.5717953729643 337.7446627461439 531.0218942223589 489.9202546098152 357.94111292938254 504.5884209486541 440.622574753468 435.4468442402048 485.04043944364565 420.89288246353703 1.199600672766381 1.0895213829440118 0.8024480261326432 1.2616556761763789 1.1640022319746834 0.8504328009404907 1.198852349308539 1.0468758040631398 1.0345787785516394 1.152408272158572 1.0 8.717309302871653 -9.071317976413269 0.011253333352840228 5.852045440025829e-05 2.0784175303371017 0.0 0.1419441392864466 2180.192099124992 16.050882207058173 1498.6720359805618 1463.6433000183044 8.485589600336974e-10 9.071317976413269 2.0783590098827016 S(ph)PSGGAAGPLLTPSQSLDGSR ddPTM_A549_MK2206_60min_R1 1 SPSGGAAGPLLTPSQSLDGSR 21 0 Q96CX2 Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 1 S(0.993)PS(0.007)GGAAGPLLTPSQSLDGSR 153.36 8.602799999999999e-23 6868900.0 1438.3 1653.2 1252.7 1315.8 2254.4 1614.8 1623.3 1458.9 2022.6 2187.8 2022.2 True False 1681.0498769411436 1737.3408186118784 1430.3516967087282 1638.1710590685066 1922.7807463856216 1785.6770641825124 1918.2325976644536 1665.7035426938687 1564.4843294285033 1693.57446050691 1520.0319301192415 1.1059306345027047 1.1429633708257627 0.941001085810429 1.0777214784823614 1.2649607605511193 1.1747628643843238 1.261968620299953 1.0958345740560858 1.029244385218786 1.114170319023532 1.0 10.569885914213087 -8.70299983198771 3.562525722539151 1.0130155655180055 1.1373032963572884 0.13514572322949414 0.08904419729363246 0.2236486048568424 5.7177363481369685 0.015501147526207886 0.01725820370923879 1.9815277923839285e-09 8.70299983198771 0.1242877308392829 S(ph)PSGHPHVR ddPTM_A549_MK2206_60min_R1 5 SPSGHPHVR 9 0 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 1 S(0.995)PS(0.005)GHPHVR;S(0.997)PS(0.003)GHPHVR;S(0.998)PS(0.002)GHPHVR;S(0.988)PS(0.012)GHPHVR;S(0.988)PS(0.012)GHPHVR 117.02 5.661e-05 505704300.0 2692.03 3248.2000000000003 2780.98 2782.08 3566.1499999999996 2764.02 3032.58 2649.14 3908.15 4026.7 4369.49 True False 3146.3788501855465 3413.5195058160534 3175.3647812828594 3463.6897248923165 3041.5740590503374 3056.506761792014 3583.56053164866 3024.6637076509965 3022.960265033129 3117.065673335392 3284.4250412109195 0.9579694499666592 1.0393050421261978 0.96679471793095 1.054580232896807 0.9260598189596537 0.9306063385344074 1.0910769728900416 0.9209111700524142 0.920392527490476 0.9490445463739905 1.0 11.681425124679048 -6.772435144150536 24.972800119894977 0.9637619824822486 1.004432014670766 0.1256825958460036 0.05332837539764838 369.65522056569745 839535.3454360128 0.00787995036146996 0.014993688593911328 1.688748031722566e-07 6.772435144150536 0.04067003218851728 S(ph)PSGHPHVR ddPTM_A549_PD325901_60min_R1 6 SPSGHPHVR 9 0 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 1 S(0.994)PS(0.006)GHPHVR;S(0.951)PS(0.049)GHPHVR;S(0.998)PS(0.002)GHPHVR;S(0.933)PS(0.067)GHPHVR;S(0.999)PS(0.001)GHPHVR;S(0.993)PS(0.007)GHPHVR 102.53 0.00021164 572169400.0 3676.0200000000004 4240.63 3823.7200000000003 3976.79 5145.61 3826.83 4031.24 4674.110000000001 3812.7999999999997 4366.38 5405.25 True False 4049.2068442571035 4598.002772592276 4083.2206330962645 4222.427286354616 4784.200104990813 3795.6655652614436 4184.651044179172 4580.881209281642 3652.561275369161 4090.6860216289256 4740.438516702857 0.8541840232691111 0.9699530447217678 0.8613592642767339 0.8907250397778524 1.009231548544246 0.8006992500561876 0.8827561056713683 0.9663412347066591 0.7705112644113876 0.8629340950664081 1.0 12.210804807205461 -4.248108857438005 17.55178105138983 0.896412027694601 0.9045494051868476 0.0 0.07575110203835915 0.0 0.0 0.01174641290855912 0.0 5.6479538911958725e-05 4.248108857438005 0.008137377492246523 S(ph)PSGLRPR ddPTM_A549_MK2206_60min_R1 4 SPSGLRPR 8 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 S(0.993)PS(0.007)GLRPR;S(0.984)PS(0.016)GLRPR;S(0.999)PS(0.001)GLRPR;S(0.995)PS(0.005)GLRPR 66.429 0.0023656 66207000.0 4196.28 3519.06 3322.94 3165.2299999999996 4230.34 3002.12 2584.7400000000002 3326.46 4018.58 4086.5899999999997 3941.3199999999997 True False 4904.509474803996 3698.165122879453 3794.182858674307 3940.7114920925756 3608.062589897511 3319.8023457540285 3054.3538005835157 3797.995891856498 3108.3780463536 3163.426480739984 2962.581469101754 1.6554850983696423 1.2482914517117822 1.2807016104859024 1.3301613924181426 1.2178779309625078 1.1205775707361672 1.0309771503126248 1.2819886748998126 1.0492126811608158 1.0677939201783793 1.0 11.532639112412394 -2.000000000000061 0.22841767007933517 0.9953791291046823 4.013196371705966 0.7102699052060153 0.09666465331197674 15.959873658890869 0.18808174005740252 0.05212897438923778 18.236325778159557 0.009999999999998599 2.000000000000061 3.017817242601284 S(ph)PSGLRPR ddPTM_A549_PD325901_60min_R1 2 SPSGLRPR 8 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 S(0.998)PS(0.002)GLRPR;S(0.995)PS(0.005)GLRPR 55.531000000000006 0.0057646 74033000.0 4760.4 4494.1 5302.1 4636.9 5773.7 4904.9 5346.8 5822.7 5749.5 5841.3 7326.0 True False 5243.672303578737 4872.833579045322 5661.932390117399 4923.310781836036 5368.175230183686 4864.956120614409 5550.275399881222 5706.561680680214 5507.8685094248285 5472.479321117503 6424.948443340294 0.8161423161323582 0.7584237635550526 0.881241684668491 0.7662802005733192 0.8355203590385236 0.7571976901475564 0.8638630253343583 0.8881879334915573 0.8572626781361874 0.8517545890644365 1.0 12.649469162184834 -10.801898086769466 0.2699896891415749 1.0971552375145408 0.7905469728091895 0.22561514704647379 0.059356495156439315 1.6351781635734939 0.14956635048280395 0.16117715235278704 0.023768147132737977 1.5779815215302253e-11 10.801898086769466 -0.3066082647053513 S(ph)PSGPVK ddPTM_A549_MK2206_60min_R1 2 SPSGPVK 7 0 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 1 S(0.993)PS(0.007)GPVK;S(0.962)PS(0.038)GPVK 64.485 0.025741000000000003 30863000.0 12013.2 12021.0 11901.8 11118.7 17072.199999999997 14680.3 12822.3 13603.900000000001 19480.300000000003 20699.1 22016.0 True False 14040.734465458772 12632.817554157626 13589.654206025345 13842.781999137409 14560.901995406593 16233.759602005523 15151.945935460439 15532.294485196462 15068.043153646835 16023.158933850706 16548.81958931125 0.8484432614473343 0.7633666852176612 0.8211857125328017 0.8364815341922243 0.879875565554619 0.9809617848810666 0.9155907376769615 0.9385741624271888 0.910520721573348 0.9682357613107303 1.0 14.014440694262843 -2.0000000004127476 0.13165158761429022 1.0207419738622754 0.2221259139026993 0.7143159862873736 0.037762759909763126 29.047290849278582 0.24778695466277384 0.10699446005881871 4.347173453672375 0.009999999990496135 2.0000000004127476 -0.7986160599595761 S(ph)PSHS(ph)GNAGDLK ddPTM_A549_MK2206_60min_R1 1 SPSHSGNAGDLK 12 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 2 S(0.998)PS(0.18)HS(0.823)GNAGDLK 75.462 0.0014273 3423800.0 1760.9 2073.4 1587.9 1663.5 2215.0 2094.5 1946.9 2141.1 3215.0 2261.6 3019.4 True False 2058.096870128389 2178.9272037925634 1813.0880970733526 2071.0575746773516 1889.1764341927585 2316.1385997834236 2300.6265289182084 2444.6074818437464 2486.807633300027 1750.7029892505848 2269.5996487993452 0.9068105342795394 0.9600491456478903 0.7988581149245884 0.9125211029059572 0.8323831188430802 1.0205053569728468 1.0136706401656683 1.077109561211372 1.0957032155938111 0.7713708407457389 1.0 11.1482221171426 -7.372276768689442 4.958567020223641 1.0458954038351065 0.8838791550504861 0.17676757411275046 0.09497557711064854 0.09857396586303985 3.700973220187626 0.007842875081981029 0.012656312406364705 4.24349047129149e-08 7.372276768689442 -0.1620162487846204 S(ph)PSHSGNAGDLK ddPTM_A549_MK2206_60min_R1 4 SPSHSGNAGDLK 12 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.962)PS(0.038)HSGNAGDLK;S(0.836)PS(0.164)HSGNAGDLK;S(0.973)PS(0.027)HSGNAGDLK;S(0.987)PS(0.013)HSGNAGDLK 213.94 1.256e-31 488811000.0 21352.7 22182.9 19398.2 18432.0 29107.0 21504.0 19033.1 22388.0 32674.2 28238.4 28016.800000000003 True False 24956.513736606525 23311.914859173365 22149.156448547354 22947.84082744392 24825.398857809734 23779.539006800052 22491.167901563083 25561.56756037449 25273.545869975664 21859.325827579447 21059.455335656603 1.185050293981329 1.106957159509393 1.051744031150024 1.0896692465065807 1.1788243552423154 1.129162109265854 1.067984311231563 1.213781038158911 1.200104440839171 1.0379815374697061 1.0 14.36218050372369 -10.965866267226406 1.257473323187071 1.00067204299734 1.1390679199799085 0.4198287798779452 0.05249851044690971 0.33188952341809624 0.9405971257243506 0.03880155997085958 0.00917239698844159 1.081767009711209e-11 10.965866267226406 0.1383958769825686 S(ph)PSHSGNAGDLK ddPTM_A549_PD325901_60min_R1 4 SPSHSGNAGDLK 12 0 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.72)PS(0.279)HS(0.001)GNAGDLK;S(0.993)PS(0.007)HSGNAGDLK;S(0.998)PS(0.002)HSGNAGDLK;S(0.806)PS(0.193)HS(0.001)GNAGDLK 194.19 1.3655000000000001e-21 614420000.0 60767.0 58926.399999999994 58531.8 57973.799999999996 68640.4 61348.100000000006 60807.5 63927.9 63028.4 65628.8 71416.5 True False 66936.02110569908 63892.33453021881 62504.119928306434 61554.709957947314 63819.335100524775 60848.50141349772 63121.56268764075 62652.80788403262 60379.535535165145 61484.98636771894 62632.723246493566 1.068706861783252 1.0201110732287337 0.9979467072239377 0.9827883375866687 1.0189455574103212 0.9715129449828651 1.0078048568832516 1.0003206732279548 0.9640253912884977 0.981675124131875 1.0 15.934628987676206 -2.000000000002428 0.6989044421201955 0.9862043928742729 11.406655154529355 0.6852040586588817 0.0153836667414742 119.13172681870361 0.5898509238885927 0.0028070868442384407 1942.5573792474438 0.009999999999944097 2.000000000002428 10.420450761655083 S(ph)PSKAVAAR ddPTM_A549_PD325901_60min_R1 1 SPSKAVAAR 9 1 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 S(0.976)PS(0.024)KAVAAR 52.576 0.006597800000000001 15071000.0 2265.7 2859.3 3665.5 4079.5 2730.6 6480.0 5694.5 4911.8 4793.0 3420.4 3896.8 True False 2495.7121960798145 3100.263245714224 3914.2628724421097 4331.4814497832795 2538.8120760586053 6427.229028437156 5911.207313649963 4813.830295767444 4591.566878106478 3204.4353602708834 3417.5183038504565 0.7302703231370964 0.907168000306308 1.1453524237257136 1.267434747870429 0.7428817786281265 1.8806714279176535 1.7296783186179023 1.408574839334083 1.3435383427012642 0.9376498018051589 1.0 11.73873334942936 -5.505754345210426 1.088436179112156 1.2569065583455334 0.5795494063257329 0.2550751958119941 0.3121322538262127 1.4520348991253587 1.7925472030546443 0.049033827834724805 1.0157627357017867 3.120654255131521e-06 5.505754345210426 -0.6773571520198005 S(ph)PSKPDFLYK ddPTM_A549_MK2206_60min_R1 2 SPSKPDFLYK 10 1 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 S(0.936)PS(0.064)KPDFLYK;S(0.948)PS(0.051)KPDFLYK 58.223 0.0032408999999999997 12080600.0 3530.7 3803.3999999999996 4158.8 3487.0 5751.200000000001 3320.7 3977.0 4502.6 5821.9 5264.3 5168.6 True False 4126.595842672666 3996.9768143651204 4748.58037540693 4341.315156537376 4905.206098568571 3672.0942698977374 4699.56942087817 5140.857338634189 4503.248945663896 4075.0909737848638 3885.0939738968978 1.0621611395756103 1.0287979753436955 1.2222562458750317 1.1174286093736032 1.2625707721680828 0.9451751475175996 1.209641118710012 1.3232259948342284 1.159109400163869 1.0489040937399492 1.0 11.923733780086666 -10.572805069624087 1.0286187083223546 1.0057555975394905 1.1483876018960644 0.16806148550578348 0.10400248188111692 0.595510050923631 1.1864510464848002 0.055894582269293926 0.018190033260265755 2.674206440250934e-11 10.572805069624087 0.14263200435657386 S(ph)PSKPDFLYK ddPTM_A549_PD325901_60min_R1 2 SPSKPDFLYK 10 1 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 S(0.975)PS(0.025)KPDFLYK;S(0.926)PS(0.074)KPDFLYK 95.508 0.00015498 24308000.0 4959.6 5334.6 5570.0 5610.7 6869.8 5159.6 5214.2 5656.799999999999 6848.8 5781.1 6803.1 True False 5463.094940935454 5784.165463780331 5948.013695130963 5957.260196175767 6387.288947523404 5117.58192825993 5412.629234319721 5543.970686326251 6560.968753343559 5416.080359391301 5966.361828404086 0.9156492847831108 0.9694627362765075 0.9969247367489895 0.9984745088397106 1.0705500489620674 0.8577391173121003 0.9071909129868377 0.9292045715251537 1.0996598835338356 0.9077693433889548 1.0 12.542635756839971 -8.751879500213265 24.996069090299013 1.0470616131451942 0.9578643239963341 0.0 0.07108737691086212 189.68167799886467 495957.8369932044 0.011004356822985136 0.012400606609509701 1.770600162683366e-09 8.751879500213265 -0.08919728914886005 S(ph)PSKPLPEVTDEYK ddPTM_A549_MK2206_60min_R1 2 SPSKPLPEVTDEYK 14 1 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 SSB Lupus La protein 1 S(0.989)PS(0.011)KPLPEVTDEYK;S(0.976)PS(0.024)KPLPEVTDEYK 106.67 5.2537999999999996e-06 12467300.0 5929.5 6776.1 5501.7 5645.6 7662.5 6100.5 6065.2 6775.5 8818.0 8687.0 8048.0 True False 6930.254637643412 7120.974546936816 6281.923788442893 7028.772253440611 6535.356400452374 6746.050860815837 7167.168330779549 7735.947874098504 6820.7370794524595 6724.600666616476 6049.459486499677 1.1455989833652689 1.1771257519499707 1.0384272846957645 1.1618843417542386 1.0803207154353298 1.11514935770224 1.18476177033241 1.2787833179745218 1.127495290227831 1.1116035542718292 1.0 12.562590529366272 -10.257397433250869 0.9588271659037114 1.0094972133234525 1.1436904804847883 0.15322762917437327 0.06619867227789007 0.3623292181344619 0.6542215903726438 0.027590785331706776 0.011571380592493925 5.528439569487314e-11 10.257397433250869 0.13419326716133573 S(ph)PSKPLPEVTDEYK ddPTM_A549_PD325901_60min_R1 1 SPSKPLPEVTDEYK 14 1 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 SSB Lupus La protein 1 S(0.992)PS(0.008)KPLPEVTDEYK 135.28 1.4094000000000001e-09 15269000.0 5514.5 5221.2 5185.4 5184.2 5771.7 5733.0 4824.7 4996.9 5404.3 6692.5 6403.2 True False 6074.327980439659 5661.208847802994 5537.312426343288 5504.416259827551 5366.31570328406 5686.3123487700905 5008.3065986771435 4897.232909507782 5177.176064959495 6269.934407850806 5615.646993229127 1.0816790990893073 1.008113375828075 0.9860506604171724 0.9801927126944253 0.9556006119605294 1.012583653428744 0.8918485447386093 0.8720692229074322 0.9219197843457214 1.1165114928717144 1.0 12.455236533494654 -4.297714689941071 0.6835205226075904 0.9529883766827072 1.4619882291597677 0.19265478216289866 0.06321905408718531 7.158400179417966 0.8860507980515359 0.0076887137126507256 3.8567423408401678 5.0383149253479586e-05 4.297714689941071 0.5089998524770605 S(ph)PSKPLPEVTDEYKNDVK ddPTM_A549_MK2206_60min_R1 2 SPSKPLPEVTDEYKNDVK 18 2 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 SSB Lupus La protein 1 S(0.983)PS(0.017)KPLPEVTDEYKNDVK;S(0.988)PS(0.012)KPLPEVTDEYKNDVK 199.46 2.482e-49 163175000.0 20750.9 19687.3 18720.7 17661.3 26951.0 19499.7 20487.3 20463.7 27036.0 24724.0 26752.0 True False 24253.14460920393 20689.299478742814 21375.576761056185 21988.31929284588 22986.543601773825 21563.145311146727 24209.577218093367 23364.4921424529 20912.389167620393 19138.831228436247 20108.740082360775 1.206099661633132 1.0288709980836295 1.062999306446189 1.093470759619289 1.1431120750293766 1.0723270191383967 1.203933071835257 1.1619073122809938 1.0399651635044291 0.9517668014031707 1.0 14.295535071641629 -8.91605915412594 5.169842163825331 1.0171653555912414 1.1172848812689458 0.4763201194851082 0.05727008614606269 0.14949579924326717 6.632088467564307 0.009606831356015155 0.010113445663139334 1.213223589169221e-09 8.91605915412594 0.10011952567770432 S(ph)PSKPLPEVTDEYKNDVK ddPTM_A549_PD325901_60min_R1 2 SPSKPLPEVTDEYKNDVK 18 2 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 SSB Lupus La protein 1 S(0.922)PS(0.078)KPLPEVTDEYKNDVK;S(0.982)PS(0.018)KPLPEVTDEYKNDVK 211.71 3.8983e-56 257130000.0 49045.0 49180.0 53158.0 47474.0 57238.0 51038.0 54223.0 56409.0 54653.0 56294.0 61085.0 True False 54024.01229497929 53324.57119722503 56765.62154502187 50406.36115872327 53217.80034038027 50622.36344959499 56286.4859369641 55283.878242995546 52356.12447092707 52739.58723280585 53571.93224971909 1.0084387481704578 0.9953826370991994 1.059614973012655 0.9409098951996003 0.9933895998432897 0.9449419000536504 1.050671192418288 1.03195602475745 0.9773051348395522 0.9844630390960445 1.0 15.70918971213517 -6.249533119257186 24.995597535340174 0.9910367310157471 1.0185691627825708 0.1397552186478046 0.0337244685447538 1235.7090997460477 2594195.2957438785 0.004552436279755378 0.011938546288097674 5.6294618553302e-07 6.249533119257186 0.02753243176682374 S(ph)PSKPTLAYPESNSR ddPTM_A549_PD325901_60min_R1 2 SPSKPTLAYPESNSR 15 1 F5GXS6;F5H6R3;F5H0C6;F5H1B0;F5GYW0;Q86XR8-3;Q86XR8-2;Q86XR8-4;Q86XR8-5;Q86XR8 F5GXS6 CEP57 Centrosomal protein of 57 kDa 1 S(0.976)PS(0.024)KPTLAYPESNSR;S(0.935)PS(0.063)KPT(0.002)LAYPESNSR 93.196 7.02e-06 58027000.0 13738.6 16153.1 15461.2 15208.199999999999 17001.9 17215.0 14392.7 16095.9 16459.3 17895.8 19764.7 True False 15133.332558177237 17514.37842630938 16510.490007748453 16147.575973671808 15807.745197370838 17074.80674761506 14940.422074487633 15774.854647510732 15767.572859757562 16765.85613388366 17333.767198756203 0.8730550251801663 1.0104196177023848 0.9525044278276205 0.9315676037711231 0.9119624727915542 0.9850603479225379 0.8619258527690214 0.9100649885642095 0.9096448959398148 0.9672367201912522 1.0 14.081297613293195 -10.821234811625859 1.0853688220211002 0.9997057335069423 0.9284126804097981 0.1950432455665312 0.04249344001960952 0.5132014167798912 1.0801285006733534 0.02738193049855755 0.006891209095371587 1.5092639141450167e-11 10.821234811625859 -0.07129305309714418 S(ph)PSLAK ddPTM_A549_MK2206_60min_R1 2 SPSLAK 6 0 O15018-2;O15018;A6PVK7;Q5VXU9-3;Q5VXU9;Q5SW96 O15018-2;Q5SW96 PDZD2;C9orf84;LDLRAP1 PDZ domain-containing protein 2;Processed PDZ domain-containing protein 2;Uncharacterized protein C9orf84;Low density lipoprotein receptor adapter protein 1 1 S(0.746)PS(0.254)LAK;S(0.993)PS(0.007)LAK 85.212 0.040050999999999996 42649000.0 9294.3 12410.4 10671.6 8421.5 12997.7 8819.8 7286.2 8647.4 11504.5 12113.2 12642.9 True False 10862.950616181663 13042.036350895734 12184.993347646581 10484.767878055502 11085.755547949073 9753.105381890586 8610.00822589956 9873.195431551834 8898.749118911408 9376.81970701724 9503.319003711078 1.1430691332091076 1.3723664696305338 1.2821829239751186 1.1032743269968275 1.16651409298373 1.0262841201144532 0.9060001271700259 1.0389207631245798 0.936383290452148 0.9866889350294944 1.0 13.2142157427316 -6.912600536020278 1.1282760005998111 0.9700878987799455 1.2720108750268522 0.7411204768026034 0.07002188773548665 0.16393166123318592 0.4095599944986304 0.010723587329137621 0.028996973895191576 1.2229239882530227e-07 6.912600536020278 0.30192297624690667 S(ph)PSLAK ddPTM_A549_PD325901_60min_R1 2 SPSLAK 6 0 O15018-2;O15018;A6PVK7;Q5VXU9-3;Q5VXU9;Q5SW96 O15018-2;Q5SW96 PDZD2;C9orf84;LDLRAP1 PDZ domain-containing protein 2;Processed PDZ domain-containing protein 2;Uncharacterized protein C9orf84;Low density lipoprotein receptor adapter protein 1 1 S(0.921)PS(0.079)LAK;S(0.938)PS(0.062)LAK 75.21300000000001 0.045926 63540000.0 12456.0 13483.2 13616.599999999999 13766.1 17564.0 15939.099999999999 15396.400000000001 15931.3 14478.9 16433.8 17841.4 True False 13720.523950377454 14619.476583294512 14540.70435926756 14616.400731918533 16330.365232510565 15809.297254191764 15982.318427233351 15613.537723636928 13870.402184731045 15396.16706339015 15647.020905952984 0.8768777157546593 0.9343297149767635 0.9292953877076676 0.934133137532759 1.0436724876041803 1.0103710699445057 1.021428840882599 0.9978600921851317 0.8864564231171944 0.9839679486548525 1.0 13.933600382820389 -5.3992769798930915 1.1907774981561954 0.9644770382284912 0.8561155066024406 0.29648387514266583 0.04466914211774364 1.7578494843206052 2.418460105432041 0.008476390652110267 0.22003935135560226 3.987704974752812e-06 5.3992769798930915 -0.10836153162605056 S(ph)PSLDNPTPFPNLGPSENPLKR ddPTM_A549_MK2206_60min_R1 1 SPSLDNPTPFPNLGPSENPLKR 22 1 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653-3;Q14653-2;Q14653;Q14653-4 M0R0R8 IRF3 Interferon regulatory factor 3 1 S(0.958)PS(0.042)LDNPTPFPNLGPSENPLKR 122.79 1.0153999999999999e-15 5626100.0 1536.2 1350.3 1116.5 1300.7 1568.5 1201.9 1310.9 1494.2 1785.1 1931.4 1593.2 True False 1795.4730035159475 1419.024502402382 1274.8364886846769 1619.3715583906414 1337.7757277793853 1329.0842602433504 1549.0735614355535 1706.007425795585 1380.777700218936 1495.0953985844444 1197.5644699169097 1.4992704348021633 1.184925353121772 1.0645243080509297 1.3522207773106343 1.117080342131563 1.1098227223921948 1.2935199735368172 1.4245641622233103 1.1529881980506136 1.2484466900459883 1.0 10.225887609037569 -9.657734334495313 1.103716943491187 1.0290138319779325 1.2397164506067095 0.02397458437726896 0.14728776250072945 0.37757451610055776 0.9478546415938192 0.03743104384223389 0.025635232118587804 2.1992047532809803e-10 9.657734334495313 0.21070261862877704 S(ph)PSLESLSRPPSLGFGDTR ddPTM_A549_MK2206_60min_R1 4 SPSLESLSRPPSLGFGDTR 19 1 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 S(0.591)PS(0.407)LES(0.001)LSRPPSLGFGDTR;S(0.958)PS(0.041)LES(0.001)LS(0.001)RPPSLGFGDTR;S(0.534)PS(0.463)LES(0.002)LS(0.001)RPPSLGFGDTR;S(0.889)PS(0.067)LES(0.022)LS(0.021)RPPSLGFGDTR 62.082 0.00072594 14861800.0 3209.1 3807.5199999999995 3858.26 3299.15 4598.36 4395.6 3546.59 3684.9700000000003 5095.799999999999 5232.8 5201.1 True False 3750.7176250377715 4001.306504767176 4405.419284220817 4107.441898104474 3921.947335410659 4860.739474436868 4190.959495195455 4207.325782247328 3941.609436320463 4050.706845662567 3909.523326942529 0.9593797789079948 1.0234768206118947 1.1268430741571012 1.0506247321247546 1.0031778831916693 1.2433074490025473 1.0719873357228502 1.0761735972394613 1.0082071666274024 1.0361127193555977 1.0 11.932777000691297 -8.778347877204888 6.778735039896834 1.003736306649483 1.0728715936653461 0.10113992301706776 0.06988499250169215 0.2044978126026688 38.37032020089296 0.01182641758898335 0.012786447905130605 1.6659122541472145e-09 8.778347877204888 0.06913528701586302 S(ph)PSLESLSRPPSLGFGDTR ddPTM_A549_PD325901_60min_R1 2 SPSLESLSRPPSLGFGDTR 19 1 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 S(0.929)PS(0.066)LES(0.005)LSRPPSLGFGDTR;S(0.947)PS(0.037)LES(0.006)LS(0.009)RPPS(0.001)LGFGDTR 78.354 9.4387e-05 11370200.0 2412.7 2888.1 3208.3 2885.2 3488.4 3087.7 2567.4 2357.4 2477.7 3438.0 3323.3 True False 2657.635527864136 3131.4903227878303 3426.034531075167 3063.412251235379 3243.386818326682 3062.5547949236734 2665.103811935188 2310.3798076554767 2373.570885433846 3220.924093267251 2914.5551681344236 0.9118494502765788 1.0744316515347572 1.1754913986644953 1.0510736886123988 1.1128239581077273 1.0507794906088475 0.914411859852045 0.7927040918337898 0.8143853001599362 1.1051168728876493 1.0 11.509059994606613 -7.75181088065727 4.5736434425921795 0.8988304252193492 1.071651540322595 0.30489354736387175 0.09986513552290788 0.1447946294548347 7.444523751246747 0.0147824973570159 0.021504825597144474 1.770879943802048e-08 7.75181088065727 0.17282111510324583 S(ph)PSLGKK ddPTM_A549_PD325901_60min_R1 1 SPSLGKK 7 1 O76021;O76021-2 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 S(0.998)PS(0.002)LGKK 48.283 0.024018 20281000.0 5721.3 5497.1 5848.1 5808.6 5195.8 5932.8 5082.2 5570.9 5910.7 7511.0 7106.7 True False 6302.12216420155 5960.35990907413 6244.987233482117 6167.384029712264 4830.864932536913 5884.485243813573 5275.605902086552 5459.7840292134915 5662.293834012933 7036.75417816472 6232.6209530830565 1.0111512013391595 0.956316765280865 1.0019841220077634 0.9895329871875937 0.775093651435237 0.9441429677995622 0.8464506251542374 0.876001295492345 0.9084932128291866 1.1290200753639426 1.0 12.60562326024808 S(ph)PSLGSDLTFATR ddPTM_A549_MK2206_60min_R1 2 SPSLGSDLTFATR 13 0 Q13425 Q13425 SNTB2 Beta-2-syntrophin 1 S(0.995)PS(0.003)LGS(0.002)DLTFATR;S(0.948)PS(0.051)LGSDLTFATR 147.7 1.3419e-12 59845000.0 2830.33 3567.6 3072.3999999999996 2984.9 4337.8 3932.9 3393.8 3931.2 5462.9 4432.4 5236.4 True False 3308.020509075177 3749.175601548351 3508.112519332557 3716.2006339972518 3699.7153662489113 4349.076867552268 4010.4095299412497 4488.459638795079 4225.561872458702 3431.117761564506 3936.057362712094 0.8404401166541496 0.9525205697116735 0.8912757605024673 0.9441429053352636 0.9399546361538964 1.1049322880181776 1.0188900110891483 1.1403440613737292 1.0735519031021257 0.8717143693252313 1.0 11.94253553082126 -7.109014261523784 4.900559225023427 1.0472820994940153 0.9125805927383724 0.4199339468536071 0.07066765534845768 0.11610645369233091 4.304206694110727 0.007480273206816034 0.013201597614756637 7.780110020055546e-08 7.109014261523784 -0.13470150675564285 S(ph)PSLGSDLTFATR ddPTM_A549_PD325901_60min_R1 5 SPSLGSDLTFATR 13 0 Q13425 Q13425 SNTB2 Beta-2-syntrophin 1 S(0.955)PS(0.045)LGSDLTFATR;S(0.975)PS(0.025)LGSDLTFATR;S(0.98)PS(0.018)LGS(0.002)DLT(0.001)FATR;S(0.563)PS(0.373)LGS(0.063)DLTFATR;S(0.845)PS(0.122)LGS(0.027)DLT(0.005)FATR 160.84 1.3500999999999998e-18 98125400.0 12768.8 14946.8 13462.2 14838.7 16360.7 15309.4 14850.0 14864.0 16084.7 16708.4 18176.7 True False 14065.079176106254 16206.419291799171 14375.825846784943 15755.252797867193 15211.580873350917 15184.725322215383 15415.124876231795 14567.525859417581 15408.715995050965 15653.428772526615 15941.081131594796 0.882316516677758 1.0166449287858201 0.9018099668467555 0.988342802336079 0.9542377174909404 0.9525530418460555 0.9670062368404506 0.9138355008146302 0.9666042012992019 0.9819552791499153 1.0 13.960461856449848 -9.817095158245777 0.8610405673365569 0.9961614696671135 0.9504571611752017 0.15663402725969489 0.03685681777719657 0.5577412627187052 0.8571991939130049 0.012080075260593482 0.006651857028505304 1.523718855243693e-10 9.817095158245777 -0.04570430849191176 S(ph)PSLLQSGAK ddPTM_A549_MK2206_60min_R1 2 SPSLLQSGAK 10 0 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.835)PS(0.159)LLQS(0.006)GAK;S(0.998)PS(0.002)LLQSGAK 110.08 0.00019651 12601400.0 4999.5 5806.8 5923.9 5539.4 8332.9 6360.4 6018.6 6315.299999999999 9235.5 8285.9 9479.9 True False 5843.293373960404 6102.341317151859 6763.99809701671 6896.553248673117 7107.141448525884 7033.453306308183 7112.101713979729 7210.51311479511 7143.673996062958 6414.109435192527 7125.779198070119 0.8200216722324134 0.8563753026201768 0.9492292574612204 0.9678314549152628 0.997384461540812 0.9870433970523615 0.9980805630219227 1.011891179107534 1.002511275959503 0.9001274466839593 1.0 12.798832064963982 -5.695261953024577 1.1007444421441503 1.000902721374428 0.7841335879050393 0.7462349193180204 0.031617927502162614 0.07417324319302299 0.11286095558329996 0.0011883256933608913 0.015521302440655372 2.017149314479209e-06 5.695261953024577 -0.21676913346938864 S(ph)PSLLQSGAK ddPTM_A549_PD325901_60min_R1 3 SPSLLQSGAK 10 0 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.999)PS(0.001)LLQSGAK;S(0.9)PS(0.1)LLQSGAK;S(0.767)PS(0.233)LLQSGAK 108.56 0.00023654 26340500.0 17392.9 17851.9 16772.9 19066.7 21145.4 17353.2 17961.9 18413.3 19813.1 20229.4 20809.899999999998 True False 19158.614404023756 19356.342264248502 17911.20985764132 20244.40675538249 19660.22005166982 17211.881292635124 18645.449933628817 18046.032286545586 18980.424308911224 18952.112231629002 18250.4142248249 1.049763263891484 1.0605974212858837 0.9814138811862043 1.1092573848458347 1.0772478810331465 0.9430953774858915 1.021645300974406 0.9888012438643005 1.0399996446707132 1.0384483331808232 1.0 14.155641588381494 S(ph)PSLNLLQNK ddPTM_A549_MK2206_60min_R1 1 SPSLNLLQNK 10 0 O43353-2;O43353 O43353-2 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 1 S(0.99)PS(0.01)LNLLQNK 72.006 0.0023477 1882900.0 1393.2 1546.5 1804.8 1411.9 1837.1 1822.7 1067.6 1413.1 2200.4 1873.3 2365.0 True False 1628.3380995302805 1625.2102443644264 2060.747778574211 1757.8155633825986 1566.8650235916548 2015.576904189661 1261.5691007617638 1613.4112524372522 1702.012913316759 1450.1202289366463 1777.705229320545 0.9159775606626561 0.9142180703296893 1.1592179314012863 0.9888116063282616 0.8813975442883322 1.133808277629938 0.7096615794081603 0.9075808665162742 0.9574213346761002 0.8157259173338289 1.0 10.795800407787503 -6.536768253711601 24.890296084569012 0.9583738668184739 1.0025407096240357 0.017428118242766577 0.12175393086217014 736.727475888666 1320228.7203448708 0.01576844196402806 0.03283469932200171 2.9055726996349105e-07 6.536768253711601 0.04416684280556182 S(ph)PSLNLLQNK ddPTM_A549_PD325901_60min_R1 4 SPSLNLLQNK 10 0 O43353-2;O43353 O43353-2 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 1 S(0.684)PS(0.316)LNLLQNK;S(1)PSLNLLQNK;S(0.957)PS(0.043)LNLLQNK;S(0.995)PS(0.005)LNLLQNK 105.46 0.00031863 9930900.0 9997.0 10475.4 9921.800000000001 9903.800000000001 12133.300000000001 11454.3 10963.4 11123.5 11587.0 10690.8 11594.4 True False 11011.888080597577 11358.198721419496 10595.153012630246 10515.535232838252 11281.098865612643 11361.019978461069 11380.618186402671 10901.633066283062 11100.038684877905 10015.781063496655 10168.362302957235 1.0829559129098911 1.1170135743605658 1.041972413743449 1.0341424626244926 1.1094312465962974 1.1172910287782503 1.1192183999082015 1.0721129658325188 1.0916250182833978 0.9849945119071726 1.0 13.311799719742146 -10.63511318212592 0.7680485126074358 0.9960615135013793 1.0878293809407151 0.618553846427565 0.028401141767146844 0.4461036360483068 0.4379150046355169 0.024900543677911318 0.005687541085938048 2.316790789018386e-11 10.63511318212592 0.09176786743933585 S(ph)PSLSSK ddPTM_A549_MK2206_60min_R1 2 SPSLSSK 7 0 Q9UPU5;A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 Q9UPU5;A9Z1X7 USP24;SRRM1 Ubiquitin carboxyl-terminal hydrolase 24;Serine/arginine repetitive matrix protein 1 1 S(0.983)PS(0.016)LS(0.001)SK;S(0.826)PS(0.008)LS(0.083)S(0.083)K 96.03399999999999 0.01182 228670000.0 17785.4 18839.1 17378.8 17142.4 23758.0 19578.3 17865.5 19759.5 27223.0 25949.0 27727.0 True False 20787.14070871795 19797.929721697932 19843.375163057106 21342.288769551567 20263.229672032307 21650.06271097628 21111.430095222262 22560.469635930844 21057.03396619802 20087.10287763682 20841.620673729707 0.99738600150801 0.9499227546470357 0.9521032684405939 1.0240225126279618 0.972248271343579 1.0387897875075325 1.0129457025303528 1.0824719434783543 1.010335726565633 0.9637975468460599 1.0 14.34717984752297 -6.262101576026565 24.996845967945696 1.012213097284756 0.9648158818005746 0.294467199501359 0.03208056787330733 49.48516882075979 1868032.5461994475 0.003996232708957249 0.009786090734249412 5.468880376889024e-07 6.262101576026565 -0.04739721548418141 S(ph)PSLSSK ddPTM_A549_PD325901_60min_R1 3 SPSLSSK 7 0 Q9UPU5;A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 Q9UPU5;A9Z1X7 USP24;SRRM1 Ubiquitin carboxyl-terminal hydrolase 24;Serine/arginine repetitive matrix protein 1 1 S(0.994)PS(0.005)LS(0.001)SK;S(0.499)PS(0.015)LS(0.243)S(0.243)K;S(0.977)PS(0.013)LS(0.009)S(0.002)K 68.37100000000001 0.02282 235242000.0 38363.5 39336.7 40496.0 40231.0 46055.0 39845.0 42339.0 42893.0 44116.0 47056.0 45593.0 True False 42258.134278284 42651.74176116067 43244.30208223047 42715.977498769775 42820.25568112467 39520.515530567645 43950.23381378978 42037.46546609243 42261.95793752251 44084.87612937282 39985.35003783974 1.056840423762539 1.0666842161140924 1.081503651745118 1.0682906979267641 1.0708986076300981 0.9883748796288591 1.0991584110730035 1.0513216822238818 1.0569360502666183 1.10252570222978 1.0 15.287183897071492 -11.509632050216888 0.33247805604913083 0.9537222409549515 1.0652369786159264 0.0 0.04054070177378787 3.6336281923410088 0.33577757037683276 0.15762767052361285 0.009317006299862497 3.092914750516111e-12 11.509632050216888 0.11151473766097486 S(ph)PSMPCSVIRPILK ddPTM_A549_MK2206_60min_R1 1 SPSMPCSVIRPILK 14 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.81)PS(0.188)MPCS(0.003)VIRPILK 50.145 0.0073473 4231200.0 1403.8 1250.8 1270.5 855.42 1881.8 1415.7 1388.9 1193.4 2089.8 2080.2 1934.8 True False 1640.727120385162 1314.4603774012435 1450.6760043653221 1064.997938401263 1604.9897128053854 1565.508434334395 1641.2451517871996 1362.5681046342204 1616.463636724852 1610.281375238356 1454.3357622365288 1.1281625350819908 0.9038218075445109 0.9974835536839316 0.7322916523509478 1.1035895248406569 1.0764422322441558 1.12851873302162 0.9369006387760246 1.1114789849071698 1.1072280673082044 1.0 10.506144667119246 S(ph)PSMPCSVIRPILK ddPTM_A549_PD325901_60min_R1 2 SPSMPCSVIRPILK 14 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.866)PS(0.132)MPCS(0.002)VIRPILK;S(0.868)PS(0.129)MPCS(0.003)VIRPILK 50.07899999999999 0.0073831999999999995 16767600.0 4130.0 4566.200000000001 4398.700000000001 4466.5 4774.700000000001 4416.6 5210.8 4402.9 4436.799999999999 4882.8 5667.2 True False 4549.274559654694 4951.009699080298 4697.222233531885 4742.38556084251 4439.34154382078 4380.632673919063 5409.099845459169 4315.0807054917705 4250.336725387614 4574.499174696141 4970.170327340721 0.9153156250258275 0.9961448749241004 0.945082748511181 0.9541696256876399 0.8931970639718579 0.881384818910806 1.0883127718388066 0.8681957400442945 0.8551692287096623 0.9203908263529708 1.0 12.279079578340827 -6.573593727001144 24.99898203228842 0.9309551285861009 0.9554193730078893 0.027600128024160564 0.06507274256836883 410.2210877212706 202209.12189094519 0.010531511363631682 0.021923093552304783 2.669354619807343e-07 6.573593727001144 0.024464244421788406 S(ph)PSMPENLNRPR ddPTM_A549_MK2206_60min_R1 2 SPSMPENLNRPR 12 1 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;H0Y999 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 S(0.5)PS(0.5)MPENLNRPR;S(0.589)PS(0.411)MPENLNRPR 118.52 5.4124e-06 84923000.0 3137.5 3253.1 2616.8 2099.3999999999996 3588.6 2973.8 2454.1 2455.6 3776.2 4244.8 3911.9 True False 3667.0332954897044 3418.66889488646 2987.901588526704 2613.7530942456456 3060.721693789675 3288.485542151323 2899.9782036150673 2803.688819959602 2920.896729352274 3285.8967318583673 2940.4672670524487 1.2470920307729092 1.162627767767456 1.01613155909122 0.8888903894739476 1.0408963663988582 1.118354752320617 0.9862303981781888 0.953484111649386 0.9933444123253947 1.1174743445289836 1.0 11.521829715334029 -5.661402838888159 3.0377301602790205 0.9974439825281444 1.233740659741979 0.5775933502803994 0.0640927693243796 0.1008760898662155 1.7697044074766626 0.007290529520763986 0.03708466668581701 2.180706213978197e-06 5.661402838888159 0.23629667721383474 S(ph)PSMPENLNRPR ddPTM_A549_PD325901_60min_R1 2 SPSMPENLNRPR 12 1 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;H0Y999 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 S(0.5)PS(0.5)MPENLNRPR;S(0.874)PS(0.126)MPENLNRPR 77.372 0.00030055 110125000.0 6382.799999999999 6614.599999999999 6230.6 6243.900000000001 7616.599999999999 6567.099999999999 6396.2 7519.0 7795.599999999999 7593.5 8032.4 True False 7030.777157230984 7172.035555940722 6653.445983641472 6629.571522074236 7081.636291843543 6513.619714915066 6639.610891134943 7369.027646458612 7467.978041929246 7114.045114085183 7044.465721578838 0.9980568342740425 1.0181092277830393 0.9444926338785946 0.9411035249651816 1.005276563437713 0.9246435389645423 0.9425286676882065 1.0460733202073176 1.0601198638887674 1.0098771709958367 1.0 12.782274576000672 -8.266699762274587 24.987018528279183 1.0305094383277067 0.9675484021535042 0.46276683954273123 0.03174303003719165 331.49230622127396 1574599.4165541048 0.0058433106587083995 0.007174621351970925 5.411282880486234e-09 8.266699762274587 -0.06296103617420246 S(ph)PSPAHLPDDPK ddPTM_A549_MK2206_60min_R1 4 SPSPAHLPDDPK 12 0 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.5)PS(0.5)PAHLPDDPK;S(0.5)PS(0.5)PAHLPDDPK;S(0.5)PS(0.5)PAHLPDDPK;S(0.5)PS(0.5)PAHLPDDPK 89.911 8.418e-05 378282000.0 14098.7 14963.4 13699.3 13696.8 20067.3 17211.6 14641.8 17335.8 20767.100000000002 23510.8 22809.9 True False 16478.21587987909 15724.973146151076 15642.066734830272 17052.516614872708 17115.426752991574 19032.92008786457 17302.02553347097 19793.202738660893 16063.38500824417 18199.693951040248 17145.572308785922 0.9610770397810019 0.9171448385011396 0.9123093970339382 0.9945726108036924 0.9982417877192177 1.1100778524675734 1.009124992847563 1.1544206505441783 0.9368824043285388 1.0614806915318984 1.0 14.065548440910604 -6.275129832584347 19.479157848811074 0.9988404423877274 0.928873896706186 0.2300281879408521 0.06460808300766643 55.479351516440346 78939.91363387488 0.009696902937942297 0.022746425228997485 5.307257597426194e-07 6.275129832584347 -0.06996654568154137 S(ph)PSPAHLPDDPK ddPTM_A549_PD325901_60min_R1 2 SPSPAHLPDDPK 12 0 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.5)PS(0.5)PAHLPDDPK;S(0.5)PS(0.5)PAHLPDDPK 83.69200000000001 0.00016715 671380000.0 7058.900000000001 7143.2 6891.0 7532.4 8906.3 7993.9 7624.3 8107.6 7962.4 7908.9 8630.2 True False 7775.514331512472 7745.182533062584 7358.664698949284 7997.6592406784175 8280.752213066997 7928.800328769098 7914.446908677044 7945.88755771084 7627.768017991867 7409.530704258685 7568.740111345266 1.027319503262803 1.0233119936900512 0.9722443353443875 1.0566698186254562 1.094072737502831 1.0475720149096037 1.0456756068045692 1.0498296203618147 1.007798907847043 0.9789648733151859 1.0 12.885837454570957 -8.834973207056775 6.0728712265195695 1.0034674502153242 1.0396216411226826 0.3091768851737666 0.028666864744423374 0.22347340876719998 14.06654801007248 0.005185891220812918 0.005512712747695704 1.4622673833820475e-09 8.834973207056775 0.036154190907358386 S(ph)PSPAHLPDDPKVAEK ddPTM_A549_MK2206_60min_R1 1 SPSPAHLPDDPKVAEK 16 1 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.5)PS(0.5)PAHLPDDPKVAEK 75.533 0.00021035 68963000.0 2072.3 2724.0 2426.7 1884.3 2982.6 1950.1 1833.9 1659.0 3588.1 3530.2 4636.5 True False 2422.053577129344 2862.6399648552847 2770.842550014427 2345.953584589442 2543.8634910263295 2156.458287628385 2167.0958916139 1894.1683304744192 2775.401079018299 2732.725368169621 3485.1290891098106 0.6949681102767982 0.8213870682151618 0.7950473222563386 0.6731324793448777 0.7299194451577965 0.6187599461858666 0.6218122302515431 0.5435001924012627 0.7963553165622356 0.7841102290037778 1.0 11.766996379140124 -9.729005460412079 1.0059369864847378 0.9664499754860997 0.6957267339218131 0.3251717554416249 0.09780207882592265 0.22291739308220546 0.46607347034587215 0.028476328650563994 0.018032503689638518 1.8663562248719062e-10 9.729005460412079 -0.2707232415642866 S(ph)PSPAVPLR ddPTM_A549_MK2206_60min_R1 2 SPSPAVPLR 9 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 S(0.958)PS(0.042)PAVPLR;S(0.902)PS(0.098)PAVPLR 63.733999999999995 0.006592799999999999 39962000.0 3609.6 4161.700000000001 3651.8 3503.3 5765.1 4069.2 3525.6000000000004 4101.4 5659.7 5568.7 5364.6 True False 4218.812233752873 4373.512753942085 4169.6801517050635 4361.608657269111 4917.061426981791 4499.800043083649 4166.155883894412 4682.786010010716 4377.786986683723 4310.726802369882 4032.4217645720896 1.0462229598149595 1.084587131328062 1.0340386981190544 1.0816350352012234 1.2193817299028433 1.115905107600062 1.0331647151836345 1.1612837851319457 1.08564709801587 1.0690168474545283 1.0 11.977430827724644 -10.297936035952066 0.8067311288043916 1.0024870010325202 1.0970874821831387 0.11021610314939256 0.05624665289542627 0.5798301322777722 0.7166967722443749 0.030411126795802972 0.01064180590775358 5.035747711598019e-11 10.297936035952066 0.09460048115061848 S(ph)PSPAVPLR ddPTM_A549_PD325901_60min_R1 1 SPSPAVPLR 9 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 S(0.671)PS(0.329)PAVPLR 118.91 0.00015951 28568000.0 4179.8 4410.5 3946.0 4631.0 4791.8 4351.4 4702.5 4686.8 4394.9 4582.8 5982.0 True False 4604.130218993869 4782.188313651097 4213.799289225636 4917.046352235906 4455.240498812578 4315.96364110207 4881.456210806737 4593.318097276526 4210.197636676436 4293.4412258944585 5246.251923022336 0.8776037229149025 0.9115437809353435 0.8032018574506598 0.9372493781052023 0.8492235150320305 0.8226756367078285 0.9304654603766258 0.8755427998261931 0.802515338274294 0.8183825879678747 1.0 12.357071371595627 -10.974128809004505 1.2308075275961872 1.0003324397903184 0.8628630230833063 0.0 0.06909824968165512 0.28097721293817485 0.7540524865348455 0.03254019813058602 0.007429364690823036 1.0613807116848247e-11 10.974128809004505 -0.13746941670701207 S(ph)PSPEEK ddPTM_A549_MK2206_60min_R1 1 SPSPEEK 7 0 P25686 P25686 DNAJB2 DnaJ homolog subfamily B member 2 1 S(0.913)PS(0.087)PEEK 80.23899999999999 0.015958 7824300.0 3318.5 2748.2 2781.0 1982.0 1036.6 789.34 619.88 622.42 1445.4 4295.2 4545.6 True False 3878.581670464566 2888.0716414887265 3175.387617583598 2467.5900889753602 884.1175131757168 872.8674348785138 732.5041721433147 710.6499410813062 1118.0192078295056 3324.9113368540457 3416.8020678221856 1.1351496497239921 0.8452557637702253 0.9293449121586194 0.7221928692369829 0.2587558470248875 0.25546327166526955 0.21438296910485102 0.20798686226921625 0.3272121667094732 0.9731062177017735 1.0 11.738430960862924 -6.400218925350186 3.5142509252969822 0.5444436941370077 0.9588680310262965 0.36266243607321613 0.28220380151271285 0.3036272093325028 6.82940588978172 0.05035741695210604 0.12444777552096344 3.979065375920157e-07 6.400218925350186 0.4144243368892888 S(ph)PSPGLFR ddPTM_A549_MK2206_60min_R1 2 SPSPGLFR 8 0 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 S(0.884)PS(0.116)PGLFR;S(0.616)PS(0.384)PGLFR 96.948 0.0024721 82197000.0 2859.6000000000004 2873.3 2604.2 2599.2 3052.8999999999996 2532.2 2642.0 2833.7 3846.0 3700.1000000000004 3470.3 True False 3342.2305694923843 3019.5386971434223 2973.5147190619236 3236.0041166825217 2603.8224541521763 2800.1557232616765 3122.017201398073 3235.3856528422903 2974.8871407999723 2864.244840168944 2608.528734592425 1.2812703671499324 1.1575639007155567 1.139920246853837 1.2405476212582869 0.9981958103900344 1.0734617127762607 1.1968498410602633 1.2403105282824534 1.1404463755178031 1.0980307796442481 1.0 11.349020610312836 -10.341982422461195 0.7309140123481704 0.9988878193439183 1.1604529835073354 0.19281327540116655 0.08104178986527882 0.5873131115583529 0.5743603855695828 0.0518493211832337 0.015866580166825864 4.55006475608832e-11 10.341982422461195 0.16156516416341704 S(ph)PSPKPT(ph)K ddPTM_A549_PD325901_60min_R1 1 SPSPKPTK 8 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 S(0.999)PS(0.353)PKPT(0.648)K 63.864 0.020146 21288000.0 7119.4 7278.1 6814.7 5706.5 6782.3 5741.1 5098.0 5749.9 7297.3 6786.4 8033.3 True False 7842.156246974727 7891.4510294941765 7277.18652212011 6058.9775445981895 6305.934645664788 5694.34638505564 5292.007179732639 5635.213733790712 6990.6198580443215 6357.90554582573 7045.255027284409 1.1131117633931107 1.1201086403448384 1.0329202412031206 0.860008263878791 0.8950612321688245 0.8082526981639334 0.751144871156274 0.7998594390078172 0.9922451112091045 0.9024379559296638 1.0 12.782436215460908 -5.997611409440177 4.17047067810158 0.9367192741247452 1.1125934192421643 0.4613537013804089 0.0883708407082213 0.1982586081587503 8.210187528477189 0.015636246705960335 0.049143021236935126 1.0055150854142283e-06 5.997611409440177 0.17587414511741906 S(ph)PSPLGTSVR ddPTM_A549_MK2206_60min_R1 1 SPSPLGTSVR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.996)PS(0.004)PLGTSVR 48.74100000000001 0.030561 1409800.0 799.67 1029.1 639.88 687.14 835.75 833.51 747.08 753.68 906.54 906.8 1211.7 True False 934.6347459455782 1081.476794358507 730.6246058034496 855.4893308468863 712.8122821113302 921.7114749608409 882.8147656398447 860.5164480481976 701.2101374469071 701.953250200048 910.80144878127 1.02616739048472 1.1873902877576834 0.8021776939212028 0.9392709376907602 0.7826209357320784 1.0119784901464193 0.9692724652789323 0.9447903812621752 0.7698825450763018 0.7706984339334565 1.0 9.830992776097625 -5.758974800203329 24.999999743711804 0.8976025279058499 1.1067788559617675 0.4358497037718121 0.09554001187024784 46.94112149874125 476125.87792222016 0.013890040600187255 0.04921074795327125 1.7419079441036483e-06 5.758974800203329 0.20917632805591757 S(ph)PSPLGTSVR ddPTM_A549_PD325901_60min_R1 1 SPSPLGTSVR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.806)PS(0.193)PLGT(0.001)SVR 74.306 0.0016245 61394000.0 8675.0 8822.2 8224.4 9255.3 10658.0 9575.1 9551.9 8094.5 9444.7 10103.0 10281.0 True False 9555.679613802535 9565.677755513596 8782.55724133485 9826.978860688614 9909.418848103944 9497.12356021429 9915.402781500236 7933.048847487593 9047.772103828973 9465.094855811236 9016.502176628657 1.0597989582447458 1.0609078296801653 0.9740536928055973 1.0898881482179157 1.0990313820130586 1.0533046378928885 1.099695046622579 0.8798366253435347 1.0034680773749902 1.0497524062430061 1.0 13.138352153716605 S(ph)PSPPLPLSCSNSTR ddPTM_A549_MK2206_60min_R1 1 SPSPPLPLSCSNSTR 15 0 Q96HJ3-2;Q96HJ3 Q96HJ3-2 CCDC34 Coiled-coil domain-containing protein 34 1 S(0.716)PS(0.284)PPLPLSCSNSTR 79.02199999999999 0.00047294 6302900.0 2432.0 2492.1 1937.7 2345.0 3293.8 2586.9 1957.8 2346.5 3979.2 3326.4 3675.4 True False 2842.4621433086713 2618.9372453802685 2212.494996976533 2919.525105271051 2809.286383270477 2860.644040954758 2313.506917826321 2679.123560854866 3077.917553476664 2574.9639297148683 2762.696744120393 1.028872296374199 0.9479640684247826 0.8008461303924123 1.0567664045952283 1.0168638267117942 1.035453510068674 0.8374089276175377 0.9697494184103309 1.1140989542290982 0.9320472596910754 1.0 11.431861493658372 -8.643394493844212 8.104658958417275 1.0537720198754637 0.9586046996146834 0.02169022316021918 0.0878683876542279 0.28355263121289875 19.08014242923414 0.014325380862860636 0.016239565376532143 2.273031771496656e-09 8.643394493844212 -0.09516732026078023 S(ph)PSPPLPTHIPPEPPR ddPTM_A549_MK2206_60min_R1 1 SPSPPLPTHIPPEPPR 16 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.484)PS(0.484)PPLPT(0.032)HIPPEPPR 58.672 0.002003 2244900.0 495.13 637.1 460.61 371.86 539.1 521.32 444.88 635.68 826.04 695.66 1051.6 True False 578.6958392337267 669.5256687258816 525.931424140662 462.9657166934295 459.79910414145183 576.4857363757908 525.7089373800052 725.7895866883537 638.9432589148229 538.5099228431467 790.4586973164835 0.7321012991549497 0.8470090480360889 0.6653496582758072 0.5856924824347495 0.5816864381433425 0.729305324026282 0.6650681928919584 0.91818786883151 0.8083196011176319 0.6812625690264729 1.0 9.626546271291428 -9.364958645793227 0.49368215068097476 0.9901185927095045 0.6826529531548593 0.04900242721807191 0.12428170077898004 0.4388846552658785 0.24847530973204257 0.05226599226501033 0.03037782150227918 4.3156016871246814e-10 9.364958645793227 -0.30746563955464523 S(ph)PSPPLPTHIPPEPPR ddPTM_A549_PD325901_60min_R1 3 SPSPPLPTHIPPEPPR 16 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.495)PS(0.495)PPLPT(0.01)HIPPEPPR;S(0.531)PS(0.469)PPLPTHIPPEPPR;S(0.497)PS(0.497)PPLPT(0.007)HIPPEPPR 94.281 2.1238e-06 5848700.0 1060.96 1234.08 1110.6399999999999 1370.6799999999998 1364.75 1152.5700000000002 1271.52 1239.9 1553.95 1516.92 1794.1 True False 1168.6678781625285 1338.0802526041361 1186.0147092208715 1455.3437905598591 1268.8946681319053 1143.183852053366 1319.9083894024423 1215.1692218172675 1488.6428855066893 1421.1414123208126 1573.4370737369406 0.7427484058113121 0.8504186630267787 0.753773207087377 0.9249456586804531 0.8064476738928352 0.7265519995269238 0.8388695114877627 0.7723023958824228 0.9461089422350627 0.9032082922423944 1.0 10.619703766938095 -8.861242312344112 4.345180045329948 0.9769377371297181 0.8050192551455232 0.548997298211453 0.058543628336202115 0.08897121028746252 2.9270121069353916 0.009386941934386226 0.009936044527144106 1.3764412763685464e-09 8.861242312344112 -0.1719184819841949 S(ph)PSPPTQHTGQPPGQPSAPSQLSAPR ddPTM_A549_MK2206_60min_R1 2 SPSPPTQHTGQPPGQPSAPSQLSAPR 26 0 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7;I3L460;Q68EM7-2 Q68EM7-3;Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 S(0.551)PS(0.447)PPT(0.002)QHTGQPPGQPSAPSQLSAPR;S(0.475)PS(0.475)PPT(0.028)QHT(0.021)GQPPGQPSAPSQLSAPR 126.52 8.8096e-19 78401000.0 4317.0 4364.299999999999 3996.1 4644.5 6047.799999999999 4986.7 4374.0 3802.7 6834.0 7066.4 7724.200000000001 True False 5045.604059483363 4586.424228567514 4562.807068905367 5782.402708499531 5158.176631472218 5514.38928409644 5168.699182026933 4341.744370280334 5286.109911655485 5470.095332172056 5806.067962925053 0.869022562550478 0.7899363662041786 0.7858686977213163 0.9959240479827937 0.8884113421355075 0.9497631304540108 0.8902236789221086 0.7477942728202231 0.9104457518255407 0.9421342235574287 1.0 12.503345744191435 -14.999999998520876 0.14634092257668344 1.490709891836666 0.8279621726401741 0.18274349214978902 0.07289000928975274 55.25319881489477 0.5363170748898622 7.719985715947024 0.15156153147786056 1.0000000034058098e-15 14.999999998520876 -0.6627477191964918 S(ph)PSPPTQHTGQPPGQPSAPSQLSAPR ddPTM_A549_PD325901_60min_R1 2 SPSPPTQHTGQPPGQPSAPSQLSAPR 26 0 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7;I3L460;Q68EM7-2 Q68EM7-3;Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 S(0.548)PS(0.444)PPT(0.007)QHTGQPPGQPSAPSQLSAPR;S(0.555)PS(0.441)PPT(0.004)QHTGQPPGQPSAPSQLSAPR 136.44 1.1355e-24 142050000.0 6466.6 7788.6 7416.9 8290.4 8816.7 8165.900000000001 7665.3 8079.9 7403.1 8934.3 10305.0 True False 7123.084471540689 8444.97265609408 7920.255435442884 8802.479179135511 8197.445407963785 8099.399617795516 7957.007186113105 7918.7400559410735 7091.973451973731 8370.186773262823 9037.550328777199 0.7881654001814514 0.9344316046798384 0.8763719312547953 0.973989505884888 0.9070428500809155 0.8961941370335232 0.8804384923618683 0.8762042553418894 0.7847229828852628 0.9261565876552444 1.0 13.141716060902894 -11.114410455999131 1.4825346127249261 0.9995817951789746 0.8716860716699478 0.20036105360076217 0.05682711189583037 0.34219670067529867 1.3526907666324932 0.042494230437267924 0.009340475859555998 7.684038709180989e-12 11.114410455999131 -0.12789572350902678 S(ph)PSPRHPDVSMVDPEALAIEQNLGK ddPTM_A549_MK2206_60min_R1 1 SPSPRHPDVSMVDPEALAIEQNLGK 25 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.434)PS(0.434)PRHPDVS(0.132)MVDPEALAIEQNLGK 49.445 0.0038813000000000003 1460000.0 401.58 321.0 214.54 199.17 324.78 117.14 147.27 191.14 377.8 263.23 599.44 True False 469.3568863116349 337.33752889814446 244.96499801380259 247.9666589410811 277.0052922334643 129.5356770487611 174.027052706243 218.23468034169994 292.2289032226285 203.7661601788252 450.5825042976353 1.0416669130179943 0.74866983444904 0.5436629156199756 0.5503246499275637 0.6147715226210527 0.2874849240999279 0.38622683092747934 0.48433900175925065 0.6485580341787854 0.4522283005560866 1.0 8.815647485920028 -10.13659884879128 0.8604692702394935 0.9743307579527147 0.5761339299901662 0.0 0.24291123646197904 0.43161355457644024 0.6334820784317857 0.09123573176603413 0.03911881545869968 7.301316103441746e-11 10.13659884879128 -0.3981968279625485 S(ph)PSPRHPDVSMVDPEALAIEQNLGK ddPTM_A549_PD325901_60min_R1 1 SPSPRHPDVSMVDPEALAIEQNLGK 25 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.356)PS(0.356)PRHPDVS(0.288)MVDPEALAIEQNLGK 69.35600000000001 5.3213e-05 1246900.0 157.69 427.51 558.86 559.74 548.33 817.82 599.56 541.86 763.24 502.18 582.35 True False 173.69857271475752 463.5377680464754 596.7876002981852 594.3138685382263 509.8171924358074 811.1599450673573 622.3765838918206 531.0521772190535 731.1636770385956 470.47226909742477 510.72464182080546 0.3401021969402095 0.9076079947775729 1.1685114667084657 1.1636678943459893 0.9982232120585314 1.5882530010211717 1.2186147542694634 1.0398013601336673 1.4316201278871015 0.9211857634676187 1.0 8.99640185872328 -5.244003329617272 1.6062035135773964 1.2088399280914537 4.2057618849863846e-17 0.6174903692193919 0.1894503583083046 0.5244379875597531 1.2178065995170984 0.027612354888595095 0.999362497776856 5.701599010036284e-06 5.244003329617272 -1.2088399280914537 S(ph)PSPSFR ddPTM_A549_MK2206_60min_R1 1 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 S(0.926)PS(0.069)PS(0.006)FR 78.77 0.016623 100300000.0 1739.0 2090.4 1703.3 1653.7 2371.0 1442.7 1716.5 1896.9 2524.8 2690.7 2428.6 True False 2032.5006855319816 2196.7924311796937 1944.8535523301491 2058.856574237413 2022.2290408447088 1595.365556413246 2028.365831264113 2165.7913840126125 1952.9368312771112 2082.86900122769 1825.511594049841 1.1133868950253785 1.2033845407172559 1.0653745277046154 1.1278244306681742 1.1077601738800553 0.8739279233357137 1.1111218564020435 1.1864024260771038 1.0698024803800787 1.1409782375618387 1.0 10.834085116198562 -5.348058752852404 0.013531784592536737 2.4657609550941546e-07 2.2486720744611604 0.0 0.08935339316733408 3183.131405055493 6.484907607835171 486.18784074383416 595.8131486818936 4.486846862183441e-06 5.348058752852404 2.248671827885065 S(ph)PSPSPTPEAK ddPTM_A549_MK2206_60min_R1 2 SPSPSPTPEAK 11 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 S(1)PSPSPTPEAK;S(0.925)PS(0.075)PSPTPEAK 118.77 1.5047999999999999e-05 13889700.0 4787.4 5538.6 4722.7 4126.5 5785.8 4719.6 4192.0 4737.9 6259.6 7454.0 6948.5 True False 5595.396079307542 5820.491082726679 5392.449874707678 5137.492685245622 4934.716484402915 5219.024939383069 4953.632137873094 5409.511834210217 4841.810594527169 5770.136222972167 5222.995681155941 1.0713001543338787 1.1143970698131043 1.0324438701266996 0.98362951050892 0.9448057753918676 0.9992397577912617 0.9484273854074425 1.0357105700330573 0.927017920385412 1.1047560777793204 1.0 12.350661795422328 -6.062425535790805 2.5612071719125455 0.970285037188798 1.0928202928318782 0.2969858239673303 0.05081026442597379 0.12450674109967402 1.587883164639813 0.004799539294351502 0.016623990653229913 8.661128144869312e-07 6.062425535790805 0.12253525564308021 S(ph)PSPSPTPEAK ddPTM_A549_PD325901_60min_R1 1 SPSPSPTPEAK 11 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 S(0.693)PS(0.307)PSPTPEAK 96.334 0.00028221 9039800.0 8121.7 7148.0 6621.8 7773.0 7813.2 8541.1 7448.4 8127.5 7549.6 8510.9 8729.3 True False 8946.209005120467 7750.387045908183 7071.195168118173 8253.120556236165 7264.4277860767215 8471.544113392682 7731.852937920869 7965.390636599595 7232.316566441205 7973.52032152072 7655.651439591919 1.1685757999449018 1.0123745976503489 0.9236568858854811 1.0780428839215925 0.9488974051911575 1.1065739055962367 1.0099536269291032 1.0404588949028988 0.9447029587891896 1.0415208143208967 1.0 12.902309430340294 -8.74869558759875 24.993414646750487 0.9738875077672856 1.0315033826877056 0.03789887094233213 0.06879702857378985 322.96748772910826 633410.8574497364 0.010652810892878442 0.012039864319754293 1.783628537877463e-09 8.74869558759875 0.057615874920419974 S(ph)PSPSVR ddPTM_A549_MK2206_60min_R1 3 SPSPSVR 7 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.925)PS(0.048)PS(0.027)VR;S(0.896)PS(0.037)PS(0.067)VR;S(0.969)PS(0.027)PS(0.004)VR 91.064 0.01245 98907000.0 9182.0 9641.8 8023.9 8755.400000000001 10074.5 8528.4 7540.3 8624.2 12389.6 12637.1 12245.0 True False 10731.697121653058 10132.526436542466 9161.809674480057 10900.47339304485 8592.554395609455 9430.86962730625 8910.274906775883 9846.706760504812 9583.375382125676 9782.37033315288 9204.22855519242 1.165952915804002 1.1008555878185318 0.9953913703404906 1.184289734623715 0.9335442230801735 1.0246235815152565 0.9680631954482805 1.0698025045184203 1.0411926784151146 1.062812627315117 1.0 13.168081093012086 -2.000000008183135 0.5418305808670499 1.0183371218327888 7.378523055424913 0.3034556219029121 0.062200946293215154 89.34898599658699 0.7579361025599195 0.009886174226301728 662.5680683826613 0.009999999811576354 2.000000008183135 6.360185933592124 S(ph)PSPSVR ddPTM_A549_PD325901_60min_R1 2 SPSPSVR 7 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.744)PS(0.235)PS(0.021)VR;S(0.948)PS(0.045)PS(0.007)VR 93.429 0.01215 242280000.0 11140.4 10890.2 10383.599999999999 10526.0 12445.2 11700.0 11693.599999999999 13019.0 13426.8 13382.5 14293.9 True False 12271.365206870985 11807.955373160225 11088.29353765923 11176.167113719532 11571.092085609222 11604.719079122644 12138.606346983446 12759.325831792085 12862.518288954743 12537.52666612826 12535.840916497647 0.97890243571306 0.9419356429149083 0.8845273014805581 0.8915370885898263 0.9230407567139131 0.9257232248257385 0.9683120923310836 1.0178276764026515 1.0260594701730121 1.0001344743956024 1.0 13.613771156365035 -7.9742950085949875 2.482341618244103 1.0130764033927728 0.9211886683444188 0.7322925285241715 0.024465781595504787 0.11105386796743053 1.384991731425114 0.004262191183716464 0.005952746705279486 1.0609746109906168e-08 7.9742950085949875 -0.09188773504835401 S(ph)PSPVANTDASVNQDIAYYQALSAER ddPTM_A549_PD325901_60min_R1 1 SPSPVANTDASVNQDIAYYQALSAER 26 0 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F5GZ83 Q8NF91 SYNE1 Nesprin-1 1 S(0.5)PS(0.5)PVANTDASVNQDIAYYQALSAER 90.98 4.6766e-09 5101000.0 493.19 644.78 393.87 438.69 493.66 386.8 556.84 451.03 285.11 511.37 585.5 True False 543.2582857327113 699.1178734556065 420.6003867327168 465.7868849627229 458.9870246345459 383.6500290431315 578.03085091454 442.03385282380975 273.12781819673256 479.0820109290498 513.4872117903008 1.0579782188510831 1.3615098047293028 0.8191058649080489 0.9071051318663457 0.8938626203255636 0.7471462194852235 1.1256966826870027 0.860846857865525 0.5319077319266778 0.9329969664847243 1.0 9.00418453697749 -5.775712606376692 24.908127968679356 0.8195047455312723 1.2097439675150894 0.3689507222392061 0.16184682570769118 153.3841578087657 267671.3540372038 0.027489330643550667 0.08604964259647886 1.676051633400447e-06 5.775712606376692 0.3902392219838171 S(ph)PSPVKK ddPTM_A549_PD325901_60min_R1 1 SPSPVKK 7 1 Q9HCE3;K7EQN0 Q9HCE3 ZNF532 Zinc finger protein 532 1 S(0.682)PS(0.318)PVKK 40.001999999999995 0.050138 5637100.0 4245.4 4222.3 3088.0 3896.3 3911.4 3244.7 2668.5 3014.8 3525.5 4254.9 5023.6 True False 4676.389882701704 4578.128039163138 3297.570249652498 4136.965601860672 3636.676757597462 3218.2762389768573 2770.0512277592293 2954.667448935152 3377.3354952564973 3986.244887854224 4405.729047224172 1.0614338359386992 1.039130638786692 0.7484732298120174 0.9389968283381307 0.8254426721699439 0.7304752980677581 0.6287384444362276 0.6706421155873712 0.7665781211362479 0.9047866641653227 1.0 12.105165056540189 -5.739337904563043 19.906378131357695 0.8370169363852518 1.0502862110204099 0.39598002631919005 0.11166184783141057 24.504231267521174 22065.35351983068 0.01916536157253821 0.07389097330813585 1.8224771648760759e-06 5.739337904563043 0.2132692746351581 S(ph)PSPVLR ddPTM_A549_MK2206_60min_R1 1 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.779)PS(0.221)PVLR 76.827 0.017503 160480000.0 2787.8 2973.4 2745.1 2746.9 3775.5 2645.0 2772.0 2806.8 4049.3 5134.3 4330.1 True False 3258.3124848338466 3124.733359581753 3134.396457759344 3419.8906233130256 3220.1289513746083 2924.892144391097 3275.636518650816 3204.6724954644937 3132.140015403361 3974.458064073787 3254.816665319615 1.001074044984309 0.9600335997035065 0.9630024606782434 1.050716822164606 0.9893426519795699 0.898634990890917 1.0063966285883437 0.9845938573470475 0.9623091981728539 1.2211004405937884 1.0 11.668360567382265 -7.020707369788817 24.99063350484629 0.977388204939921 0.9929735281823082 0.0 0.08124766428446577 2293.944945201684 2768446.468887729 0.005214974574837002 0.009095859174183669 9.534383800997822e-08 7.020707369788817 0.015585323242387261 S(ph)PSPVLR ddPTM_A549_PD325901_60min_R1 1 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.802)PS(0.198)PVLR 95.605 0.011874 167000000.0 4103.5 4537.6 3825.7 3891.2 5084.4 3897.3 4301.9 4160.6 4274.3 4238.5 3905.2 True False 4520.084299162964 4919.999476708587 4085.335007802967 4131.550586443611 4727.28928422778 3865.561680945695 4465.611158590006 4077.613569072443 4094.6660352786416 3970.880386653065 3424.8851571024443 1.3197768952308728 1.436544366022204 1.192838539222519 1.2063325912916236 1.3802767296954297 1.128668992865173 1.3038717953299337 1.1905840289612009 1.1955630181605423 1.1594200110384283 1.0 11.741839897244276 -14.999999999274642 0.0993319664504357 0.10204233968871189 1.4547184015824106 0.4027913268547506 0.09071293444045148 45.198900128469695 0.3232661555319624 8.346885762565153 0.517359441510675 1.0000000016701975e-15 14.999999999274642 1.3526760618936988 S(ph)PSPYYSR ddPTM_A549_MK2206_60min_R1 4 SPSPYYSR 8 0 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 S(1)PSPYYSR;S(0.999)PS(0.001)PYYSR;S(0.942)PS(0.057)PY(0.002)YSR;S(0.868)PS(0.118)PY(0.001)Y(0.001)S(0.012)R 134.51 0.0010664000000000001 61604300.0 12985.7 16480.199999999997 12743.4 11502.6 16450.1 12679.400000000001 13078.0 13344.4 18097.5 17829.5 18945.0 True False 15177.36869011654 17318.97178737446 14550.605741069701 14320.737516371344 14030.312081315697 14021.125692095455 15454.103315626031 15236.009565511045 13998.445145768981 13801.803566874461 14240.433644599458 1.0657939967911305 1.2161828929937473 1.021781085057608 1.005639145111451 0.9852447215774607 0.9845996296196238 1.0852270163476971 1.0699119103925006 0.9830069431261843 0.9691982639944857 1.0 13.797705458956816 -5.877674987226738 7.181783174962007 1.0041460729830483 1.1400397678686902 0.5234571977074276 0.04738437940322797 0.10715257761243745 6.257356385558304 0.006220426544146097 0.01961644917305453 1.3253330030414887e-06 5.877674987226738 0.13589369488564196 S(ph)PSPYYSR ddPTM_A549_PD325901_60min_R1 2 SPSPYYSR 8 0 P62995;H7BXF3;P62995-3;H7C2L4;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 S(0.998)PS(0.002)PYYSR;S(0.982)PS(0.017)PYYSR 100.57 0.0023634 74669000.0 13949.599999999999 13333.4 12272.5 12619.8 15281.900000000001 14522.9 12703.8 12484.400000000001 13214.7 14164.8 16489.4 True False 15365.753122847242 14457.052411571376 13105.385650537657 13399.296384354715 14208.55206369296 14404.630317452142 13187.250060786095 12235.388848177668 12659.332114357125 13270.43211062011 14461.308334918851 1.06254239014768 0.9997057027449447 0.9062378968086083 0.9265618347961118 0.9825218946050976 0.9960807130202838 0.9118988237698823 0.8460775861222467 0.8753932784760143 0.9176508655566659 1.0 13.819910460394013 -7.764973212224776 24.979791799129707 0.9290246776485411 0.9743626649623408 0.2610989644485694 0.05317106973065495 173.28903196276087 1224940.8986074699 0.010390131130458708 0.014666137034255906 1.71801435295943e-08 7.764973212224776 0.04533798731379968 S(ph)PSQES(ph)IGAR ddPTM_A549_MK2206_60min_R1 1 SPSQESIGAR 10 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 2 S(0.963)PS(0.053)QES(0.985)IGAR 51.013000000000005 0.029972000000000002 2463500.0 674.82 538.3 521.8 406.69 656.74 715.28 381.07 526.96 604.28 626.77 1001.0 True False 788.7131182350156 565.6971707348015 595.7990862477964 506.329068257008 560.1344159782177 790.9704548355633 450.3054863500239 601.6581937473176 467.4115448368711 485.18222168932994 752.4240738054394 1.0482295100501526 0.7518328964060745 0.7918394785463192 0.6729304469170051 0.7444397853265077 1.0512295956124487 0.5984729915306553 0.7996264536093157 0.6212075890566648 0.6448254894815972 1.0 9.555402198396738 -11.072778377097872 1.4095843014259344 0.9992074178213639 0.7636204964940699 0.0 0.1758566425031027 0.4504138453991617 1.6063419260891334 0.09882650374248465 0.022130493203870005 8.457103057596947e-12 11.072778377097872 -0.23558692132729397 S(ph)PSQES(ph)IGAR ddPTM_A549_PD325901_60min_R1 1 SPSQESIGAR 10 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 2 S(0.827)PS(0.175)QES(0.998)IGAR 57.802 0.014356 3617400.0 924.13 792.12 753.12 900.6 916.79 907.0 728.77 801.47 771.63 909.46 984.58 True False 1017.9469972914511 858.8747323453819 804.2312520784619 956.2280165889991 852.3978331538011 899.6136927148917 756.5037411482456 785.4840521089479 739.2010745156066 852.0365403905859 863.4829017668561 1.1788849497871134 0.9946632765836532 0.9313806335167105 1.107408165966423 0.9871623762434986 1.0418430878875597 0.8761073781545528 0.9096694914302216 0.8560691508807593 0.9867439629055205 1.0 9.75402380032523 -7.747983125984764 24.992951452970107 0.924460109709507 1.0338473804436246 0.38158213318902967 0.07232814742030594 216.7074754792399 402500.2211325465 0.011917074154278107 0.017620544761656722 1.786556988131405e-08 7.747983125984764 0.10938727073411758 S(ph)PSQGSYSR ddPTM_A549_MK2206_60min_R1 1 SPSQGSYSR 9 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(0.999)PS(0.001)QGSYSR 51.346000000000004 0.026236000000000002 11621000.0 563.56 395.78 464.33 379.05 605.55 365.66 377.86 491.91 694.71 567.79 722.91 True False 658.6751502808529 415.9235114869395 530.1789760778826 471.917267016201 516.4743971672344 404.3538984945365 446.5122709009371 561.639748911194 537.3592942239073 439.525844652719 543.3914956989915 1.212155794660655 0.7654214590751303 0.9756850820712366 0.8684664201620422 0.9504646304831614 0.7441299720276188 0.8217137633458288 1.0335821472302007 0.9888989770306863 0.8088566864436018 1.0 9.08584817673892 -8.275776306495164 24.823745207106345 0.9975232013224089 0.8968568796390917 0.0009009321000845727 0.13229793757374209 1015.566980785126 1758405.3992287237 0.017891977457769406 0.0216795324645985 5.299363296773512e-09 8.275776306495164 -0.10066632168331724 S(ph)PSQGSYSR ddPTM_A549_PD325901_60min_R1 1 SPSQGSYSR 9 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(0.998)PS(0.002)QGSYSR 62.408 0.0071937 10385000.0 609.24 727.91 770.13 788.12 831.94 879.42 733.23 730.58 610.61 902.63 875.42 True False 671.0895963012172 789.2535303003667 822.3956529679015 836.8003824496135 773.5074044371917 872.2582950907714 761.1334688888513 716.0080087710774 584.9481851534738 845.6377877562005 767.7488897446025 0.8741003800402242 1.0280099923855546 1.0711779124050282 1.0899402052251506 1.0075005184240706 1.1361244630141176 0.9913833534061485 0.9326070259890091 0.761900398642141 1.101451007031099 1.0 9.584490710670288 -8.254026282861053 3.2690426070237617 0.8865579874341323 1.037895715046955 0.01897663082282075 0.1034394704025983 0.22939680339573468 5.118406873775081 0.016983796881094373 0.021574760315877704 5.571520298930993e-09 8.254026282861053 0.15133772761282271 S(ph)PSRDKEEEEEERPGTSPPPAPGR ddPTM_A549_MK2206_60min_R1 4 SPSRDKEEEEEERPGTSPPPAPGR 24 3 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 S(0.978)PS(0.022)RDKEEEEEERPGTSPPPAPGR;S(0.745)PS(0.231)RDKEEEEEERPGT(0.012)S(0.012)PPPAPGR;S(0.986)PS(0.014)RDKEEEEEERPGTSPPPAPGR;S(0.929)PS(0.057)RDKEEEEEERPGT(0.007)S(0.007)PPPAPGR 159.59 4.1473e-34 105727000.0 7191.029999999999 7446.13 6707.79 6939.67 9135.9 7710.0 7167.69 6919.49 10631.699999999999 11554.9 11445.4 True False 8404.700060196112 7825.106212007292 7659.055486282305 8639.88946153362 7792.0212122535495 8525.867082516206 8469.966492917843 7900.348897549389 8223.636925336212 8944.640064773419 8603.191303029747 0.9769281844559549 0.9095585505871012 0.8902574889372795 1.00426564483007 0.9057128846489172 0.9910121467964672 0.9845144894005802 0.918304454623386 0.955882141367719 1.0396886166675645 1.0 13.070656202967728 S(ph)PSRDKEEEEEERPGTSPPPAPGR ddPTM_A549_PD325901_60min_R1 2 SPSRDKEEEEEERPGTSPPPAPGR 24 3 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 S(0.981)PS(0.019)RDKEEEEEERPGTSPPPAPGR;S(0.977)PS(0.023)RDKEEEEEERPGTSPPPAPGR 155.15 6.491099999999999e-34 100348000.0 8725.6 8998.5 8847.0 8793.1 9334.2 9168.6 7902.0 9638.2 9066.2 10342.9 10451.7 True False 9611.41648855278 9756.835175238495 9447.410621332792 9336.229816420982 8678.597993241867 9093.933961439647 8202.714934140315 9445.958539978374 8685.179142559771 9689.847528869643 9166.207158785119 1.0485707252798626 1.0644353772745911 1.0306782792136835 1.018548856107066 0.9468036062139491 0.9921152559511811 0.8948864881674238 1.0305198623975167 0.9475215857668765 1.057127267692467 1.0 13.162109176044693 -6.426780521976262 2.226175644006748 0.9724831030924671 1.0524317716210658 0.3073795839578307 0.042434178244780386 0.1959395426185657 1.8881517030428199 0.00486991686377906 0.013370044717098285 3.7429969913366167e-07 6.426780521976262 0.07994866852859872 S(ph)PSSDSWTCADTSTER ddPTM_A549_MK2206_60min_R1 1 SPSSDSWTCADTSTER 16 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 S(0.984)PS(0.013)S(0.003)DSWTCADTSTER 53.169 0.004067800000000001 4663900.0 1490.8 1539.7 1518.6 1202.5 2359.1 1729.4 1199.1 1872.3 2599.8 2944.1 3019.8 True False 1742.410593439379 1618.0641534095744 1733.9603150170622 1497.1125539822756 2012.0795150808738 1912.403960117188 1416.9609485981928 2137.7042586782736 2010.9494510274992 2279.0257652337477 2269.900317759906 0.7676154674311468 0.7128348944443479 0.7638927143409776 0.6595499116277183 0.8864175661539765 0.8425057017501455 0.6242392837746052 0.9417612931954242 0.8859197187178874 1.0040201974520393 1.0 11.14841322789144 -8.893476734690724 0.38740131924386834 1.0062302951429225 0.7260615694189058 0.5697608211119456 0.08186920679742618 0.5382233649125563 0.21669116104902125 0.050851846397184916 0.04199247826688559 1.2779776694491303e-09 8.893476734690724 -0.28016872572401674 S(ph)PSSEWLVR ddPTM_A549_MK2206_60min_R1 2 SPSSEWLVR 9 0 Q9NWQ4-4;Q9NWQ4 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 1 S(0.998)PS(0.001)S(0.001)EWLVR;S(0.994)PS(0.003)S(0.004)EWLVR 119.22 0.00015539 12421700.0 2950.8999999999996 2725.5 2153.25 2156.15 4216.4 2998.5 2832.8 3057.1 4443.6 3767.0 3261.7 True False 3448.939777421692 2864.2163084482654 2458.613228177591 2684.4068467932516 3596.1731454313035 3315.799279756788 3347.4830916428696 3490.453286976097 3437.131694971076 2916.0320837048757 2451.729871659542 1.4067372663233704 1.168243019574386 1.0028075509449945 1.094903185633666 1.466790117051967 1.3524325489872868 1.3653555925298593 1.4236696005231022 1.4019210414255503 1.1893773932488958 1.0 11.259584318223647 -4.015558117699978 16.126873609983512 1.2345823089090653 1.2192454180724142 0.0 0.16868675187543647 0.0 0.0 0.026655249719782594 0.0 9.64810191350265e-05 4.015558117699978 -0.01533689083665113 S(ph)PSSEWLVR ddPTM_A549_PD325901_60min_R1 2 SPSSEWLVR 9 0 Q9NWQ4-4;Q9NWQ4 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 1 S(1)PSSEWLVR;S(0.997)PS(0.003)S(0.001)EWLVR 121.5 0.00012561 15034900.0 2590.9 2806.7 2605.9 2666.2 2478.3 2618.3 2836.6 2400.6 3045.2 3164.6 3876.4 True False 2853.9262606802295 3043.2304591145075 2782.7520445496907 2830.885118620463 2304.2327576708567 2596.9774328946 2944.5483652470803 2352.7181497657325 2917.220833968256 2964.7866159259856 3399.6273745242047 0.8394820803205384 0.8951658884498844 0.8185461928571366 0.8327045310419233 0.6777897998286786 0.7639006122716788 0.8661385619237711 0.6920517723196082 0.8581001717508926 0.8720916410260765 1.0 11.731160909146624 -9.890207120186961 0.8397076333427249 0.9854962679297923 0.801161868198585 0.2817582788614419 0.0739670402508743 0.3053876758386959 0.4428288863138277 0.027267032741706835 0.014007745856753202 1.2876353166894112e-10 9.890207120186961 -0.18433439973120724 S(ph)PSSKPSLAVAVDSAPEVAVK ddPTM_A549_MK2206_60min_R1 4 SPSSKPSLAVAVDSAPEVAVK 21 1 Q5SRN1;O60508 Q5SRN1 CDC40 Pre-mRNA-processing factor 17 1 S(0.691)PS(0.094)S(0.094)KPS(0.122)LAVAVDSAPEVAVK;S(0.935)PS(0.02)S(0.019)KPS(0.026)LAVAVDSAPEVAVK;S(0.954)PS(0.039)S(0.006)KPS(0.001)LAVAVDSAPEVAVK;S(0.952)PS(0.027)S(0.009)KPS(0.012)LAVAVDSAPEVAVK 144.7 3.5108e-22 27639700.0 6951.599999999999 7824.8 7822.5 7060.199999999999 10213.0 8961.3 7691.6 8099.0 10646.7 10199.2 10289.3 True False 8124.860129697595 8223.048897576953 8931.848126050949 8789.949316944423 8710.681229079291 9909.578817970483 9089.064158316958 9247.058052147271 8235.239449286291 7895.1936363479645 7734.18283976654 1.0505130662184923 1.063208495058693 1.154853500505111 1.1365065319828607 1.1262574740658997 1.2812703065434135 1.1751809268826796 1.1956089277592508 1.0647846863592993 1.0208180747620241 1.0 12.917033155483955 -9.018011466248915 2.69100094320914 1.0248354756097398 1.1493311013831469 0.44002371171517174 0.060288594121398725 0.18084063294643926 2.657613035504017 0.012345772171215089 0.012363703676768615 9.593753017415777e-10 9.018011466248915 0.12449562577340711 S(ph)PSSKPSLAVAVDSAPEVAVK ddPTM_A549_PD325901_60min_R1 2 SPSSKPSLAVAVDSAPEVAVK 21 1 Q5SRN1;O60508 Q5SRN1 CDC40 Pre-mRNA-processing factor 17 1 S(0.928)PS(0.024)S(0.024)KPS(0.024)LAVAVDSAPEVAVK;S(0.943)PS(0.026)S(0.026)KPS(0.005)LAVAVDSAPEVAVK 139.4 5.8426e-19 55126000.0 5416.6 4895.2 5256.9 4908.799999999999 5899.5 5236.200000000001 4947.0 5667.2 5155.7 4824.9 4857.2 True False 5966.489244509834 5307.735683705894 5613.664846307718 5212.0054273063315 5485.139472170126 5193.558123256581 5135.260792102273 5554.163250167608 4939.023858429707 4520.254990577416 4259.795192327665 1.4006516687131116 1.246007247781696 1.317825057978964 1.223534276176868 1.2876533317961938 1.2192037149135058 1.2055182374381315 1.303856875600788 1.1594510147636683 1.0611437373136778 1.0 12.056568353114091 -10.799122728803455 0.1745788913360437 0.7621096618056942 1.3732321435767691 0.7626158315412879 0.05337485736822959 2.9183573809146823 0.13696187676826954 0.4292683745801563 0.09679787859648924 1.5880978990150008e-11 10.799122728803455 0.611122481771075 S(ph)PSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVK ddPTM_A549_MK2206_60min_R1 1 SPSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVK 35 2 Q5SRN1;O60508 Q5SRN1 CDC40 Pre-mRNA-processing factor 17 1 S(0.339)PS(0.307)S(0.307)KPS(0.047)LAVAVDSAPEVAVKEDLETGVHLDPAVK 201.3 3.244799999999999e-89 29809000.0 3149.6 3684.3 3781.8 2995.0 6017.4 4261.4 3633.7 3939.5 6293.5 5429.2 4612.1 True False 3681.1754796731057 3871.815133082348 4318.116106500415 3728.7751344506573 5132.2484312015795 4712.338519511618 4293.896254625346 4497.936189212761 4868.032298654345 4202.739949256842 3466.7882825155543 1.0618402912686635 1.1168305698416923 1.245566718994194 1.0755704792405152 1.480404343433843 1.359280733489809 1.238580468349117 1.2974360770450597 1.4041908250370647 1.2122863027006858 1.0 11.759384018205589 -5.5449405764215625 1.5572214238059618 1.2321539479168286 1.0360649054216153 0.1765656473987527 0.13196484325699198 1.2896353248434884 4.246262628907988 0.025003165914855418 0.32568479169130526 2.8514083928814228e-06 5.5449405764215625 -0.1960890424952133 S(ph)PSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVK ddPTM_A549_PD325901_60min_R1 2 SPSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVK 35 2 Q5SRN1;O60508 Q5SRN1 CDC40 Pre-mRNA-processing factor 17 1 S(0.944)PS(0.027)S(0.027)KPS(0.001)LAVAVDSAPEVAVKEDLETGVHLDPAVK;S(0.506)PS(0.416)S(0.075)KPS(0.002)LAVAVDSAPEVAVKEDLETGVHLDPAVK 278.3 2.678599999999999e-184 55702000.0 8869.5 8995.0 11068.900000000001 9687.3 12884.3 10103.0 9720.1 11012.4 11884.400000000001 10879.7 11437.9 True False 9769.9251106192 9753.040217955244 11820.102116702903 10285.662519545425 11979.351216421986 10020.724517638977 10090.003724542816 10792.749042939331 11384.939997114257 10192.753885258782 10031.110810822 0.9739624349557557 0.9722791824244668 1.178344287050529 1.0253762233838355 1.1942198069926753 0.9989645919201872 1.0058710261337438 1.075927606272243 1.134963037675916 1.0161141749388707 1.0 13.292193753448688 -5.626466200977777 23.085263938623616 1.0696219055000558 0.9729934798922567 0.23351090296220578 0.06767648772773238 6.14582925685807 1346.2785647129353 0.009568204054922444 0.03705753108230119 2.363381322443196e-06 5.626466200977777 -0.09662842560779905 S(ph)PSSQTPNSR ddPTM_A549_MK2206_60min_R1 1 SPSSQTPNSR 10 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 S(0.993)PS(0.005)S(0.001)QTPNSR 93.839 0.00059074 38594000.0 996.43 912.91 878.05 1096.7 1231.9 1224.4 854.04 983.07 1440.7 1400.5 1475.0 True False 1164.6030236254353 959.373219646122 1002.5706931388996 1365.3915492327335 1050.6891418880618 1353.965195309058 1009.2080131271802 1122.4231830256097 1114.3837503251486 1084.1260773105066 1108.7167920709528 1.0504062281316164 0.8653005226466585 0.9042622068221906 1.2315061510724865 0.9476623330701954 1.2212002244324358 0.910248695018047 1.0123623914174285 1.0051112766530852 0.9778205625311098 1.0 10.114675178697311 S(ph)PSSQTPNSR ddPTM_A549_PD325901_60min_R1 2 SPSSQTPNSR 10 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 S(0.994)PS(0.004)S(0.002)QTPNSR;S(0.991)PS(0.006)S(0.002)QT(0.001)PNSR 105.94 0.00030586 95922000.0 2791.5 2639.2 2698.4 2221.04 2947.8 2614.4 2397.2799999999997 2762.9 2972.3999999999996 2651.8 2340.8 True False 3074.8910250063122 2861.614646273204 2881.5296507973785 2358.228596452177 2740.7566973579264 2593.109193201558 2488.509802241952 2707.7917920468813 2847.480364799436 2484.364895440981 2052.896439553777 1.497830560646634 1.3939400892990064 1.4036410192341293 1.1487323719869513 1.3350681722423683 1.2631466172571293 1.2121945141971513 1.3190104185847067 1.3870550457081858 1.2101754611552589 1.0 11.0034451357274 -10.826321556095966 0.8540485974402897 0.9796330400143456 1.3268579845578221 0.32339122821437427 0.10990411973755751 0.37633796400014446 0.438881569169391 0.08878072916659192 0.017387857238001056 1.4916895383419517e-11 10.826321556095966 0.3472249445434765 S(ph)PSSVPR ddPTM_A549_PD325901_60min_R1 1 SPSSVPR 7 0 Q96NG3-2 Q96NG3-2 TTC25 Tetratricopeptide repeat protein 25 1 S(0.958)PS(0.041)S(0.001)VPR 53.775 0.044077 5521800.0 1638.5 1717.8 2174.8 2019.0 2010.9 1762.2 1594.6 1375.1 1580.1 2165.3 2117.2 True False 1804.8393138000529 1862.565034619625 2322.395006134799 2143.7090445183094 1869.661321228392 1747.8492274555483 1655.283375598601 1347.6725517549191 1513.693891945764 2028.582588467591 1856.797822036591 0.9720171428359666 1.0031059992178946 1.2507527629408393 1.154519366124108 1.006927786665374 0.9413244709316039 0.8914720579449178 0.7258046814578616 0.8152173995365309 1.092516678117697 1.0 10.858601020223787 -7.164657702513672 2.4174917831994476 0.8934654786086452 1.097998925555429 0.3644704408032443 0.11242182836312095 0.22993662019589475 2.6244650951832207 0.017236433733675754 0.03200215638676429 6.84450897784062e-08 7.164657702513672 0.20453344694678377 S(ph)PSTASLTR ddPTM_A549_MK2206_60min_R1 2 SPSTASLTR 9 0 Q9UF83;A8MUU9 Q9UF83 Uncharacterized protein DKFZp434B061;Putative uncharacterized protein ENSP00000383309 1 S(0.989)PS(0.008)T(0.002)ASLTR;S(0.993)PS(0.005)T(0.001)ASLTR 71.221 0.0032015 23786000.0 4804.2 4899.0 4494.6 4243.6 4708.4 4238.2 3439.2 3845.2 5774.1 6589.4 7298.3 True False 5615.0315085869715 5148.338174679161 5132.001864793688 5283.282190502447 4015.8005971797656 4686.683510910529 4064.058122274127 4390.268875431122 4466.275569342982 5100.849963462943 5485.930687167077 1.0235330755676322 0.9384621258016207 0.9354842701164062 0.963060324998514 0.7320181070777466 0.8543096473810394 0.7408147047466249 0.8002778609108253 0.8141327012735841 0.9298057621098037 1.0 12.421520679011595 -5.878173188818053 1.335007799451198 0.8757104775912687 1.0041426352394047 0.26895578584379165 0.08283953090159386 0.8847071799315978 2.5326466582597025 0.015301086585939578 0.11300735871114134 1.3238135169299484e-06 5.878173188818053 0.12843215764813598 S(ph)PSTASLTR ddPTM_A549_PD325901_60min_R1 2 SPSTASLTR 9 0 Q9UF83;A8MUU9 Q9UF83 Uncharacterized protein DKFZp434B061;Putative uncharacterized protein ENSP00000383309 1 S(0.997)PS(0.002)TASLTR;S(0.854)PS(0.055)T(0.085)AS(0.006)LTR 71.524 0.0030642 27886000.0 9109.7 8884.4 7875.200000000001 8068.9 9642.3 8763.099999999999 8097.6 7993.200000000001 8941.6 9298.9 10327.3 True False 10034.510037793309 9633.11956780451 8409.658429424662 8567.297627198515 8965.058112129163 8691.73621899654 8405.758599176741 7833.769355455903 8565.815647251602 8711.765867039794 9057.107570148537 1.107915519394537 1.0635977869529185 0.928514800590664 0.9459198271460975 0.9898367710324253 0.9596591573720258 0.9280842182863559 0.8649305857065611 0.9457562009624141 0.9618706413240624 1.0 13.14483467704744 -5.636202111359621 4.625863247556312 0.9594857557636137 1.0977915873784105 0.6853112570723752 0.03582839552896354 0.1030195338907211 3.5945304028065763 0.005792634444700477 0.024552922981537443 2.3109890550231517e-06 5.636202111359621 0.13830583161479681 S(ph)PSTLLPK ddPTM_A549_MK2206_60min_R1 3 SPSTLLPK 8 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.625)PS(0.315)T(0.06)LLPK;S(0.982)PS(0.014)T(0.004)LLPK;S(0.905)PS(0.093)T(0.002)LLPK 111.61 0.0015034 239642100.0 16709.91 16345.199999999999 16632.72 14580.36 24920.5 20407.8 16492.5 19901.7 27518.4 23688.1 24496.7 True False 19530.134289923928 17177.10086400607 18991.48980033623 18152.548854537225 21254.727461986724 22567.339850398734 19488.97376762214 22722.82692140008 21285.5263378549 18336.941757900047 18413.493315474243 1.0606425383450346 0.9328539984083771 1.0313898332575628 0.9858286281442464 1.1543017448038921 1.225587098751854 1.0584071926886405 1.234031290646212 1.155974370162943 0.9958426379903772 1.0 14.16847573306068 -6.748101390352519 24.956124786743118 1.102741274050368 0.9997420342937839 0.31082694046877724 0.08042334999628048 269.6557789099821 504537.7839876302 0.012723170474320042 0.02636819413941742 1.786070550297108e-07 6.748101390352519 -0.10299923975658398 S(ph)PSTLLPK ddPTM_A549_PD325901_60min_R1 4 SPSTLLPK 8 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.851)PS(0.146)T(0.002)LLPK;S(0.706)PS(0.253)T(0.041)LLPK;S(0.986)PS(0.013)T(0.001)LLPK;S(0.996)PS(0.004)TLLPK 129.63 0.0010683 431141400.0 25450.5 26326.9 26919.0 26345.199999999997 30694.8 28105.7 26570.5 28465.600000000002 28084.2 29319.6 28360.5 True False 28034.216024332138 28545.560257263594 28745.885217097028 27972.48316970966 28538.903139311387 27876.816497615124 27581.654917435506 27897.831277168814 26903.918739436278 27468.355452285774 24872.338292021883 1.1271242653258888 1.1476830172585721 1.1557371437939004 1.1246422769459592 1.1474153657867223 1.1207959690125704 1.1089289070293271 1.1216408746787347 1.0816803158417176 1.1043736672356452 1.0 14.602254523764001 -9.682188218197043 0.3790762723166305 0.9847611223169774 1.1473995566311057 0.3781504550998147 0.032360714798235636 0.18363971276796093 0.05737043235638599 0.011760487808167778 0.004704467238540928 2.0787955659351722e-10 9.682188218197043 0.16263843431412828 S(ph)PSTPAKSPK ddPTM_A549_PD325901_60min_R1 1 SPSTPAKSPK 10 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.778)PS(0.075)T(0.147)PAKSPK 51.218 0.020066999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PSTTYLHTPTPSEDAAIPSK ddPTM_A549_MK2206_60min_R1 2 SPSTTYLHTPTPSEDAAIPSK 21 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.25)PS(0.25)T(0.25)T(0.25)YLHTPTPSEDAAIPSK;S(0.706)PS(0.098)T(0.098)T(0.098)YLHTPTPSEDAAIPSK 186.96 5.0171e-45 76888000.0 6021.700000000001 7326.799999999999 5935.6 5744.299999999999 8142.9 6171.299999999999 5811.4 6035.6 9440.3 9609.7 10426.8 True False 7038.015743569828 7699.702824706936 6777.357332948297 7151.653757871429 6945.090196834402 6824.342869822604 6867.2561560199665 6891.164783249793 7302.087123061353 7438.862095773493 7837.537794959602 0.8979881089818853 0.9824134857325588 0.8647304179262628 0.9124873072345153 0.8861316370685777 0.8707253538491906 0.8762007068643888 0.8792512347030171 0.9316812644600447 0.949132532484564 1.0 12.936184779702035 -9.73701710375146 0.8511616774557063 0.9910976666847393 0.8976032611128406 0.4100078078954412 0.03403255931336514 0.2737028586277438 0.4149974554725667 0.011774105224986309 0.006812475019930913 1.8322422620406674e-10 9.73701710375146 -0.0934944055718987 S(ph)PSTTYLHTPTPSEDAAIPSK ddPTM_A549_PD325901_60min_R1 2 SPSTTYLHTPTPSEDAAIPSK 21 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.5)PS(0.167)T(0.167)T(0.167)YLHTPTPSEDAAIPSK;S(0.298)PS(0.234)T(0.234)T(0.234)YLHTPTPSEDAAIPSK 198.54 5.2731e-56 126448000.0 10171.6 10457.0 11941.8 12913.0 15075.199999999999 13766.0 12320.2 14983.3 14778.8 13387.1 14398.4 True False 11204.21334406385 11338.248088844695 12752.242359877011 13710.606682449203 14016.369958616671 13653.894260102756 12789.05195287212 14684.446327328535 14157.698430661387 12541.836221343214 12627.488078977727 0.8872875803950788 0.8979021019802536 1.009879580176122 1.085774668461153 1.1099887698133057 1.0812834805074014 1.0127946170199411 1.1628952833283792 1.1211808985376241 0.9932170312021829 1.0 13.624280059338139 -5.870638178271704 2.77013205191716 1.0695770073841069 0.88634932665558 0.6513988294054697 0.04996946085809937 0.13538089496949943 2.0469279216592433 0.00786919524137163 0.03200645820647414 1.3469820916003568e-06 5.870638178271704 -0.1832276807285269 S(ph)PSVPK ddPTM_A549_PD325901_60min_R1 1 SPSVPK 6 0 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 S(0.993)PS(0.007)VPK 62.842 0.060698 13055000.0 5434.7 4909.6 5957.5 5523.3 5991.5 5007.5 5428.5 5828.5 5149.8 5541.1 5726.4 True False 5986.426743185316 5323.349222242698 6361.811775357765 5864.461696675571 5570.677709552896 4966.7205802313365 5635.084538089183 5712.245995130205 4933.371814911902 5191.234000349958 5022.08910264044 1.1920192216497834 1.0599870120671229 1.266766010187463 1.167733502297329 1.109235140138001 0.988975001980751 1.1220598485850146 1.1374242627688356 0.9823345850869326 1.0336801865224947 1.0 12.294071910005297 -7.826753713766233 0.5316327027318715 0.9876580314509368 1.174293507297593 0.39238985748720734 0.0684672436206643 0.519771857746101 0.30586762365391756 0.018551894877037366 0.03673317176907692 1.49020592647901e-08 7.826753713766233 0.1866354758466563 S(ph)PSVS(ph)PSKQPVSTSSK ddPTM_A549_PD325901_60min_R1 1 SPSVSPSKQPVSTSSK 16 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 S(0.99)PS(0.201)VS(0.698)PS(0.111)KQPVSTSSK 74.047 0.00016381 8649000.0 3213.0 3111.3 3475.6 3605.7 4435.0 4068.8 3787.5 3892.2 4124.9 4059.7 4816.0 True False 3539.1813947144155 3373.5001701082983 3711.4751164806453 3828.415899861156 4123.500899919398 4035.665041806339 3931.635385099524 3814.56701762817 3951.544797726148 3803.369849167266 4223.662531139345 0.8379413290293605 0.7987144203015402 0.8787338214446465 0.906420878002398 0.9762855979895418 0.9554894625347131 0.9308592616273614 0.9031419980893169 0.9355730408367183 0.9004909414818459 1.0 12.044278853235976 -2.0000000000000004 0.22203188834754212 0.9832762968022212 0.029170843344462016 0.5095543155531189 0.03912904120485653 19.375207902626748 0.22579543262701743 0.021932908871773606 6.739406521710013 0.00999999999999999 2.0000000000000004 -0.9541054534577591 S(ph)PSWQRPNQGVPSTGR ddPTM_A549_MK2206_60min_R1 1 SPSWQRPNQGVPSTGR 16 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;A0A0A0MSP3 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.995)PS(0.005)WQRPNQGVPSTGR 70.414 0.00039389 31977000.0 1874.1 1975.3 1484.3 1836.5 2437.9 1694.7 1902.9 1856.4 2965.3 2931.2 2864.7 True False 2190.4022626541037 2075.834332811541 1694.7960592518275 2286.442582443618 2079.288139466602 1874.0320291491835 2248.632298463433 2119.550384986565 2293.664284611065 2269.039884193188 2153.31592830214 1.0172228951007694 0.9640175440713467 0.7870633551613352 1.0618240233082967 0.9656214920149186 0.870300546481738 1.0442649259723114 0.9843192803843703 1.0651777820728738 1.0537422095708429 1.0 11.072344287751616 -7.791074432183855 24.999836277281084 1.0282561947046502 0.9443943233504399 0.26381657954879423 0.07082001748209182 217.37816318020896 183377.2860628665 0.010781515527962802 0.014897907805982229 1.6178027444334866e-08 7.791074432183855 -0.0838618713542103 S(ph)PSWQRPNQGVPSTGR ddPTM_A549_PD325901_60min_R1 2 SPSWQRPNQGVPSTGR 16 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;A0A0A0MSP3 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.901)PS(0.099)WQRPNQGVPSTGR;S(0.987)PS(0.013)WQRPNQGVPSTGR 88.945 3.3246e-06 86691000.0 9347.8 8882.1 7399.9 7547.3 8935.5 7655.700000000001 7795.5 8147.9 9749.099999999999 11339.5 11925.7 True False 10296.781774513354 9630.625738732666 7902.101713213575 8013.479579838063 8307.901305801533 7593.354517439242 8092.162018361282 7985.383742596099 9339.379230408487 10623.52203478882 10458.914503240972 0.9844981304056576 0.9208054751521643 0.755537461441615 0.7661865461616378 0.7943368600275975 0.726017457651675 0.7737095485247261 0.763500240882705 0.8929587508832234 1.0157384909778964 1.0 13.352445506272403 -9.39129925986278 1.1495667586304783 0.9746626236392727 0.8077795706642266 0.47246052797872784 0.0766376571251869 0.2828762070853665 0.7793765509541624 0.020637203925217514 0.016394808353327253 4.061633572038271e-10 9.39129925986278 -0.16688305297504613 S(ph)PSYGR ddPTM_A549_MK2206_60min_R1 2 SPSYGR 6 0 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 S(1)PSYGR;S(1)PSYGR 104.21 0.029662 1523990000.0 5299.200000000001 5412.4 4227.4 3673.0 9064.8 6785.1 5460.4 7507.0 8946.5 7303.1 7104.799999999999 True False 6193.575406998894 5687.868041770459 4826.9088869374 4572.885164887236 7731.379928067951 7503.094778415136 6452.483999437558 8571.1402392233 6920.132034624792 5653.324637776772 5340.48207749539 1.159740884273053 1.0650476790735695 0.9038339267681152 0.8562682354383735 1.4476932636189763 1.404947094576522 1.2082212627635447 1.6049375533609211 1.2957878959627998 1.058579460756865 1.0 12.382754262421454 -6.747339980785918 24.994260049596516 1.2219170461191373 0.9945395915773053 0.33366309002062045 0.18398615909437335 304.3875110260705 539590.0926868101 0.03072605927327602 0.06371423440192564 1.7892046541829132e-07 6.747339980785918 -0.227377454541832 S(ph)PSYGR ddPTM_A549_PD325901_60min_R1 3 SPSYGR 6 0 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 S(1)PSYGR;S(1)PSYGR;S(1)PSYGR 127.12 0.013568 2040170000.0 9405.7 8826.5 9204.4 8474.400000000001 11243.2 7988.6 8048.099999999999 7843.0 8771.5 10831.2 10213.8 True False 10360.559739889619 9570.34013160445 9829.065934553584 8997.844441241197 10453.516418934341 7923.543490211888 8354.3748495893 7686.565212285526 8402.86435871291 10147.316183535846 8957.567350612757 1.1566264962753408 1.0684083922572767 1.0972918818055228 1.0044964317935812 1.1670039431207013 0.8845642103567175 0.9326611257930207 0.8581085591011174 0.9380743710666154 1.132820528872909 1.0 13.128891270547692 -7.263352541325244 24.999262677375363 0.9521272927639141 1.0917598966786959 0.44559092677795586 0.07803420702595715 97.30376467209909 1271470.2498161949 0.008887084191617534 0.014649042085935622 5.4531501841909005e-08 7.263352541325244 0.13963260391478183 S(ph)PT(ph)PDGSER ddPTM_A549_PD325901_60min_R1 1 SPTPDGSER 9 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 2 S(1)PT(1)PDGSER 51.927 0.014129 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PT(ph)PKSPPSR ddPTM_A549_PD325901_60min_R1 1 SPTPKSPPSR 10 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 S(0.993)PT(0.946)PKS(0.045)PPS(0.017)R 52.693000000000005 0.047123000000000005 5072700.0 1832.2 1995.2 1664.1 1745.7 2012.2 1555.8 1620.1 1900.1 1937.7 1937.3 2237.1 True False 2018.2035952056485 2163.3425061550083 1777.0358330462198 1853.5279242276442 1870.870013713149 1543.1300806238457 1681.7537920527363 1862.2010149003854 1856.2652075332626 1814.9785473783145 1961.950882145314 1.028671825361308 1.1026486574370715 0.9057493993443418 0.9447371700767995 0.9535763768292855 0.786528396132168 0.8571844521478573 0.9491578162569207 0.9461323544978413 0.9250886777520694 1.0 10.938073208496307 -5.760727315799932 24.999994676999638 0.9452061222783854 1.0656602587071635 0.416138971848774 0.060837644962659365 16.192204712836286 568370.7344994908 0.009586620409030935 0.03325111492651588 1.734892957967758e-06 5.760727315799932 0.12045413642877811 S(ph)PT(ph)SSPTPQR ddPTM_A549_PD325901_60min_R1 1 SPTSSPTPQR 10 0 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 S(0.999)PT(0.411)S(0.411)S(0.168)PT(0.011)PQR 74.84100000000001 0.002421 5449700.0 207.07 326.62 281.88 242.56 334.79 248.63 172.45 376.84 346.36 299.2 331.23 True False 228.09159396312285 354.1454136729897 301.01007188213936 257.54238030627107 311.2755053627994 246.6052397130138 179.01267911826088 369.323630574739 331.80369369934493 280.30846093820844 290.490809839968 0.7851938382793555 1.2191277716086413 1.036212030418334 0.8865766887708142 1.0715502687822782 0.8489261324613647 0.6162421427957716 1.2713780197666156 1.1422175244791266 0.9649477761194268 1.0 8.182348712068798 S(ph)PTAALNESLVECPK ddPTM_A549_MK2206_60min_R1 2 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 S(0.993)PT(0.007)AALNESLVECPK;S(0.999)PT(0.001)AALNESLVECPK 209.66 2.3992e-45 12764000.0 6065.7 5784.9 4417.6 4130.1 7292.8 5675.8 4390.4 5368.6 7975.299999999999 6016.3 7167.7 True False 7089.441867873116 6079.326700694321 5044.082106953363 5141.974685407233 6220.038780713744 6276.409388708881 5188.078849741895 6129.615490647961 6168.907283937082 4657.21365149818 5387.762271543707 1.3158416259969543 1.128358378543021 0.936210963426218 0.9543803950974898 1.1544753586411622 1.1649380712023432 0.9629375960300864 1.1376922703183223 1.144985055580331 0.8644059289876186 1.0 12.395470479702945 -10.998404552164388 1.289801204497364 1.0002446692579372 1.0978219041819477 0.19656125101974087 0.11469101610158279 0.8947745401901207 2.660326091532029 0.0757001664951961 0.017457560795113382 1.003680410541973e-11 10.998404552164388 0.09757723492401049 S(ph)PTAALNESLVECPK ddPTM_A549_PD325901_60min_R1 1 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 S(0.98)PT(0.019)AALNESLVECPK 66.498 0.003339 1933600.0 2120.5 2240.6 2381.1 2243.4 2467.3 2380.3 2155.6 2164.2 2324.5 3471.5 2899.2 True False 2335.771598970406 2429.423225386384 2542.695764717477 2381.969722868933 2294.005359722918 2360.915625985951 2237.6325375895817 2121.0333332179453 2226.809348666495 3252.3088975501023 2542.6167795430224 0.9186486999390479 0.9554814728403616 1.0000310645218304 0.9368182189441218 0.9022222216810877 0.9285377352108374 0.8800510385964436 0.834193084181232 0.8757943259804624 1.2791187896331868 1.0 11.312098321635148 -4.925816089446079 14.658728626039094 0.9307922384430651 0.7701529714975439 0.0 0.11572426134332676 6757712.81999252 28116388.65369926 0.008315204924400556 33158098.111584313 1.1862709916380404e-05 4.925816089446079 -0.16063926694552122 S(ph)PTASESRN ddPTM_A549_PD325901_60min_R1 1 SPTASESRN 9 1 Q8NFG4 Q8NFG4 FLCN Folliculin 1 S(0.996)PT(0.003)AS(0.001)ESRN 47.082 0.028261 4114900.0 930.01 1164.3 865.19 1045.6 1161.6 1001.3 871.63 757.88 1073.9 1130.6 1194.1 True False 1024.4239305628232 1262.419647111205 923.906996210119 1110.1843372701067 1080.0132233024526 993.1457447799568 904.8003566242378 742.763488854642 1028.767717587847 1059.2137230505973 1047.2332700235656 0.9782194281697819 1.2054808448578005 0.8822361002619107 1.0601117908000808 1.0313014819307158 0.9483519796478661 0.8639912257599277 0.7092626925784432 0.9823672977508602 1.0114400997084079 1.0 10.032367121411925 -7.256392970465328 20.32029943954303 0.954597553818133 1.0344377118468646 0.17014153076517124 0.10902539245321168 60.932320588250704 245344.3471841934 0.016769677629845502 0.02838237802738648 5.541240880079688e-08 7.256392970465328 0.07984015802873157 S(ph)PTDDEVTPSAVVR ddPTM_A549_MK2206_60min_R1 2 SPTDDEVTPSAVVR 14 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(0.934)PT(0.066)DDEVTPSAVVR;S(0.985)PT(0.015)DDEVTPSAVVR 79.46600000000001 0.00058157 2717500.0 960.89 1036.58 687.6 696.6800000000001 1058.93 731.21 1072.38 1112.62 1118.8899999999999 1330.65 1496.04 True False 1123.0647404950118 1089.3374944088434 785.1120193637114 867.3666312751534 903.162799756089 808.5861568620853 1267.2175648884422 1270.3372922558449 865.4632015001769 1030.0552408234396 1124.5319793964936 0.9986952448410856 0.9687029932163084 0.6981678011371986 0.7713134416512067 0.8031455007982898 0.7190423853450855 1.1268844177899895 1.1296586629200185 0.7696207999034833 0.9159857253470398 1.0 10.1351089736664 -7.702516440332635 24.99999773348899 0.9261968792937685 0.8235699524820181 0.2122834945808021 0.13255263010427729 149.30777478471236 63347.88353703392 0.023438986058484705 0.03476562850945487 1.9837345606179365e-08 7.702516440332635 -0.10262692681175034 S(ph)PTDDEVTPSAVVR ddPTM_A549_PD325901_60min_R1 2 SPTDDEVTPSAVVR 14 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(0.983)PT(0.017)DDEVTPSAVVR;S(0.99)PT(0.01)DDEVTPSAVVR 115.8 3.8448e-06 3268900.0 1322.6 1450.3 1224.79 1055.33 1357.17 999.71 1160.1399999999999 1053.92 1105.6999999999998 1162.39 1203.73 True False 1456.86937835334 1572.5218708282928 1307.911614660585 1120.5153372716734 1261.847061182326 991.5686932127941 1204.2897625529674 1032.8987388157548 1059.2312741753253 1088.9964970252815 1055.678841073166 1.3800308594537498 1.489583583232304 1.238929458253618 1.061416875735235 1.1952944513878638 0.9392711633822273 1.1407728522139637 0.9784213708079497 1.0033650699094698 1.0315604089575632 1.0 10.043955288996903 -6.082838115689705 0.9237851567182663 1.0081658874573023 1.497204130785949 0.7891302304394608 0.07766737549066684 0.23268636249192196 0.2890874075168608 0.01086400404695184 0.08537029598142114 8.263459145988913e-07 6.082838115689705 0.48903824332864665 S(ph)PTDDKVK ddPTM_A549_MK2206_60min_R1 2 SPTDDKVK 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.993)PT(0.007)DDKVK;S(0.993)PT(0.007)DDKVK 72.006 0.0016337 32578000.0 10216.3 11044.9 10097.0 9813.599999999999 9163.2 6317.2 6364.2 6646.2 9853.900000000001 14212.3 14840.2 True False 11940.561675445882 11607.038233417808 11528.906427451124 12217.93244054924 7815.3054184176435 6985.681910982023 7520.492760460861 7588.319203133868 7622.007383444835 11001.731559128966 11154.968771316178 1.0704253790606544 1.040526286659276 1.0335220710878623 1.0952906001822578 0.7006120392298968 0.6262394861153681 0.6741832195710858 0.6802635990023054 0.6832836146564588 0.9862628739417679 1.0 13.445398854267285 -6.753972144779714 24.99819626351114 0.7946862751084999 1.0566672847251994 0.5764869399506252 0.12006855483960407 136.27238391481578 456197.5552646063 0.021908902747998515 0.044909819943023684 1.7620890614439857e-07 6.753972144779714 0.26198100961669957 S(ph)PTDDKVK ddPTM_A549_PD325901_60min_R1 1 SPTDDKVK 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.993)PT(0.007)DDKVK 63.073 0.002806 26884000.0 3987.7 3814.3 4294.6 3661.3 4957.2 3960.6 4565.9 3975.5 4317.4 4170.4 5194.0 True False 4392.528368410416 4135.744447287017 4586.05738152773 3887.450185584394 4609.0233734116 3928.3461867327437 4739.657823056347 3896.2055337805828 4135.954692162929 3907.0802322750847 4555.1709274787745 0.9642949602423857 0.9079229985286403 1.0067805258113665 0.8534147779468827 1.011822266779928 0.8623927069421806 1.040500542902719 0.8553368459297487 0.907969153739775 0.8577241764312016 1.0 12.153289475154683 -10.901983989974662 1.1977778881407886 0.9993995368106343 0.9323471362660891 0.0 0.07511539337309256 0.6851133797170443 1.7708290003654155 0.03694182462228397 0.009147012961729825 1.2531873721477037e-11 10.901983989974662 -0.0670524005445452 S(ph)PTDSDVSLDSEDSGAK ddPTM_A549_MK2206_60min_R1 2 SPTDSDVSLDSEDSGAK 17 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.993)PT(0.007)DSDVSLDSEDSGAK;S(0.992)PT(0.008)DSDVSLDSEDSGAK 218.78 1.3874999999999999e-55 21289100.0 2680.9 3037.9 2752.8 2955.6000000000004 3657.7 3137.6000000000004 2899.7 2725.3999999999996 4822.1 3889.2 4726.200000000001 True False 3133.37037828792 3192.5161340799805 3143.1884335433756 3679.722132681928 3119.6571753258895 3469.6187494296805 3426.53795567524 3111.7337961874487 3729.902049311376 3010.62701883329 3552.5541035157544 0.8820049707862316 0.8986537688252333 0.8847686317944451 1.0357962258872633 0.8781448739200194 0.9766547245532453 0.9645280144457747 0.8759145407829112 1.0499212511978664 0.8474542346459549 1.0 11.794640905778138 -8.770833766400168 24.999427450155203 1.023573928054821 0.9275981148817646 0.0 0.07237086477739575 129.37107700673852 344268.7118391153 0.008425949703581667 0.009028693717037344 1.694986461194367e-09 8.770833766400168 -0.09597581317305648 S(ph)PTDSDVSLDSEDSGAK ddPTM_A549_PD325901_60min_R1 2 SPTDSDVSLDSEDSGAK 17 0 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.995)PT(0.005)DSDVSLDSEDSGAK;S(0.991)PT(0.009)DSDVSLDSEDSGAK 201.3 2.6868999999999997e-48 34955000.0 2628.7 2909.6 3378.8999999999996 2694.5 3128.0 3100.3 2970.0 3175.3999999999996 3212.2 3274.3999999999996 3751.0 True False 2895.5636888533377 3154.802203242087 3608.2124729763054 2860.9331453465015 2908.3000710141805 3075.0521847011896 3083.0249752463606 3112.06415594689 3077.202404726401 3067.6538251873994 3289.650779548108 0.8802039738853663 0.9590082396756581 1.0968375413611404 0.8696768554075827 0.8840756256242152 0.9347655391930698 0.9371891370396066 0.9460165727300657 0.9354191708911757 0.9325165589791863 1.0 11.683718724137744 -10.671795911282121 0.781690956231081 1.002918919195947 0.9395132325323026 0.0 0.06102206952562888 1.2724384776778543 1.282748051322671 0.05002029661380328 0.011088865845568653 2.1291393608749382e-11 10.671795911282121 -0.06340568666364432 S(ph)PTEDFR ddPTM_A549_MK2206_60min_R1 2 SPTEDFR 7 0 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.994)PT(0.006)EDFR;S(0.997)PT(0.003)EDFR 120.87 0.0065764 141417000.0 2136.19 2405.46 2098.3 1672.19 3758.6 2748.6 2484.0 2701.3999999999996 3539.0 2618.1 2771.1 True False 2496.726647168811 2527.887639449629 2395.870491900636 2081.8766250674607 3205.714918987312 3039.4550276269842 2935.3106465831997 3084.3317226905315 2737.4221506217123 2026.66939165058 2082.9593915307246 1.198643937716912 1.2136038992060887 1.1502242922460237 0.9994801787938515 1.5390194028849968 1.4592003281414672 1.4092020509464178 1.4807450088712093 1.3141985205050186 0.9729759494548869 1.0 11.024418998160513 -10.511035130238009 0.9494488017440235 1.0098100526451832 1.307072315661323 0.38478733559234746 0.15433921900556943 0.502972321950102 0.848693745792619 0.09381355461012479 0.03042315205165699 3.082938560145624e-11 10.511035130238009 0.2972622630161399 S(ph)PTEDFR ddPTM_A549_PD325901_60min_R1 2 SPTEDFR 7 0 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.995)PT(0.005)EDFR;S(0.996)PT(0.004)EDFR 90.709 0.012495000000000001 133894000.0 1886.52 2021.4 1772.73 2046.34 2029.7400000000002 1810.71 1924.45 2026.69 1761.51 1917.7600000000002 2406.4 True False 2078.0381216173773 2191.750472103918 1893.038118091476 2172.737774224665 1887.1780646228658 1795.9641780989862 1997.6859978494474 1986.2660780424517 1687.4798605160324 1796.6723063130316 2110.4280554264387 0.984652434028358 1.0385336123960156 0.8969924908001489 1.0295246827476598 0.894215777586191 0.8509952156298873 0.946578582820152 0.9411673963181377 0.7995912754178468 0.8513307533480412 1.0 11.04331993326655 -6.777663564382041 24.796566000829277 0.9044279753992044 0.9846168428568589 0.3260985200981176 0.061519868960060425 278.47265683139454 425609.1575247739 0.011392696529678108 0.021577146056884836 1.6685392820814627e-07 6.777663564382041 0.08018886745765452 S(ph)PTFLER ddPTM_A549_MK2206_60min_R1 2 SPTFLER 7 0 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 S(0.981)PT(0.019)FLER;S(0.998)PT(0.002)FLER 58.433 0.032754000000000005 8730000.0 876.24 787.6800000000001 816.1700000000001 641.65 1425.51 846.26 995.89 978.79 1361.27 896.43 1241.49 True False 1024.1278899888118 827.7695475466995 931.9151786563133 798.8542788047633 1215.8193673616781 935.810671498076 1176.8303219910397 1117.536479918659 1052.9445185015027 693.9258404023265 933.193769619096 1.097443985729601 0.8870285834469 0.9986298762332023 0.8560433050585343 1.302858427631747 1.002804242767339 1.2610782029453427 1.1975395853476463 1.1283235623522065 0.743603164737767 1.0 9.866032865110512 -6.728128397285071 24.999999311725244 1.0973864844978045 0.9573640607613311 0.1430678903097159 0.1537803795243245 210.30918263444175 157836.7265720022 0.016303368833608636 0.03393661796379032 1.8701291630291822e-07 6.728128397285071 -0.14002242373647344 S(ph)PTFLER ddPTM_A549_PD325901_60min_R1 2 SPTFLER 7 0 Q9Y6R1-4;Q9Y6R1;Q9Y6R1-2 Q9Y6R1-4 SLC4A4 Electrogenic sodium bicarbonate cotransporter 1 1 S(0.994)PT(0.006)FLER;S(0.994)PT(0.006)FLER 76.1 0.017833 12163800.0 1412.23 1551.73 1328.26 1718.4 1680.88 1627.71 1490.91 1797.87 1909.57 1424.99 1726.0900000000001 True False 1555.5985499712215 1682.4997328969087 1418.4037110762395 1824.5416652304434 1562.8207875212004 1614.4544694255308 1547.6473959072566 1762.0100724482688 1829.3174136085531 1335.0158882096855 1513.7918725860281 1.0276171897486637 1.1114471965176262 0.9369872680404632 1.2052790732147067 1.0323881478181116 1.0664969859215452 1.0223647146839232 1.1639711537347646 1.2084338981708953 0.8819018732932304 1.0 10.563951151129483 -8.244889791107068 24.71981938118056 1.1060930936029256 1.0600130953137454 0.0 0.10335114934619252 1912.0650797232065 2856018.7639904353 0.015161789981714628 0.019549343631131522 5.689973043269186e-09 8.244889791107068 -0.04607999828918019 S(ph)PTFSEELPVLGDGQQLR ddPTM_A549_MK2206_60min_R1 1 SPTFSEELPVLGDGQQLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 S(0.986)PT(0.014)FSEELPVLGDGQQLR 95.34700000000001 2.9082999999999998e-06 4917200.0 1331.3 1681.3 1536.6 1521.3 2520.2 1580.8 1631.7 1670.0 1867.5 2209.7 1982.0 True False 1555.990892839981 1766.8709885870726 1754.512985681035 1894.0185682937524 2149.481918488751 1748.0792067498865 1928.1587689330947 1906.7276141605066 1444.5142317846974 1710.5272352966997 1489.8146995827985 1.0444190765977233 1.1859669454744002 1.1776719522047685 1.2713115052658195 1.442784743022527 1.1733534427062715 1.2942272414636855 1.2798421271413543 0.9695932200086448 1.1481476426401944 1.0 10.540917186747233 -8.764931477858298 24.999339806659158 0.9856412258306696 1.238468239776822 0.3749202461964509 0.10568583167910324 43.93601243657972 314529.38215955585 0.01628360519160795 0.01767501541445257 1.7181794567975074e-09 8.764931477858298 0.2528270139461525 S(ph)PTFSEELPVLGDGQQLR ddPTM_A549_PD325901_60min_R1 2 SPTFSEELPVLGDGQQLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 S(0.993)PT(0.007)FSEELPVLGDGQQLR;S(0.987)PT(0.013)FSEELPVLGDGQQLR 168.69 3.3954e-30 21951000.0 3530.0 3711.3 3404.1000000000004 3673.68 4046.6 3130.8999999999996 4026.7000000000003 4056.2000000000003 3429.6099999999997 4587.5 3895.5 True False 3888.363001351347 4024.0642758084846 3635.1226965162186 3900.5948700673744 3762.380776012139 3105.402988446586 4179.938271994791 3975.295908972657 3285.475418490042 4297.84446709235 3416.37819560908 1.138153558745015 1.1778743585767046 1.0640281866885466 1.1417339201733099 1.1012775988465682 0.9089751809204915 1.223499868184114 1.1635994849990345 0.9616837570011184 1.2580119123275577 1.0 11.738251975875839 -8.769814763824064 24.99935297380701 0.981906209818761 1.1124938542377159 0.0 0.1134530013318282 139.86663657846034 417481.4901692313 0.013226781123252181 0.014194976310433796 1.6989681453334604e-09 8.769814763824064 0.13058764441895487 S(ph)PTGNTPPVIDSVSEK ddPTM_A549_MK2206_60min_R1 2 SPTGNTPPVIDSVSEK 16 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.898)PT(0.1)GNT(0.002)PPVIDSVSEK;S(0.847)PT(0.067)GNT(0.086)PPVIDSVSEK 80.53399999999999 0.00028338 2812500.0 971.86 1429.8 1218.5 1220.7 1725.0 1520.3 1590.8 1529.3 2581.8 2251.0 1839.8 True False 1135.8862083042625 1502.5707128304273 1391.301622447183 1519.7715547993062 1471.2547850936821 1681.1771369065361 1879.8277683512688 1746.082958284827 1997.0264222874077 1742.4975366126039 1382.9268841031446 0.8213638923079488 1.0865149344499685 1.0060558070280552 1.0989529325586205 1.0638702609703188 1.215665959084173 1.3593110307999936 1.262599619948235 1.4440578495098957 1.260006987095813 1.0 10.433509167303608 -6.580339288203758 1.0084011169086384 1.2299317354540729 0.9504965664663435 0.504615763138571 0.12089862627142918 0.5996932411169569 1.119577466226073 0.02769367681781661 0.1085087900790075 2.628213923898545e-07 6.580339288203758 -0.27943516898772935 S(ph)PTGPSNSFLANMGGTVAHK ddPTM_A549_MK2206_60min_R1 5 SPTGPSNSFLANMGGTVAHK 20 0 Q96I25;Q5W012;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 S(0.928)PT(0.072)GPSNSFLANMGGTVAHK;S(0.777)PT(0.222)GPSNSFLANMGGTVAHK;S(0.921)PT(0.065)GPS(0.006)NS(0.008)FLANMGGTVAHK;S(0.997)PT(0.003)GPSNSFLANMGGTVAHK;S(0.946)PT(0.054)GPSNSFLANMGGTVAHK 217.7 2.2085999999999994e-67 84038300.0 10779.3 12733.2 13284.3 11561.900000000001 17214.0 12888.699999999999 12237.099999999999 13926.4 20741.800000000003 17480.7 18198.5 True False 12598.582311417422 13381.265492105465 15168.213494522039 14394.566019033413 14681.843403247905 14252.573679173365 14460.42267041194 15900.5098478113 16043.815417848376 13531.797729126583 13679.310196951345 0.9209954398303812 0.9782120077288471 1.108843448692502 1.0522874188671791 1.073288286606732 1.0419073384526203 1.0571017443287951 1.16237658323992 1.1728526648532323 0.9892163811112612 1.0 13.739707861196594 -5.612263474772667 3.883392565400056 1.0830424847563023 0.9311987020294848 0.4233317065388742 0.0560063772817148 0.16456066932034452 4.567594338206365 0.009272225568727945 0.04314606715434175 2.441948638709333e-06 5.612263474772667 -0.15184378272681742 S(ph)PTGPSNSFLANMGGTVAHK ddPTM_A549_PD325901_60min_R1 8 SPTGPSNSFLANMGGTVAHK 20 0 Q96I25;Q5W012;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 S(0.95)PT(0.05)GPSNSFLANMGGTVAHK;S(0.934)PT(0.066)GPSNSFLANMGGTVAHK;S(0.907)PT(0.093)GPSNSFLANMGGTVAHK;S(0.81)PT(0.19)GPSNSFLANMGGTVAHK;S(0.491)PT(0.491)GPS(0.014)NS(0.005)FLANMGGTVAHK;S(0.875)PT(0.124)GPS(0.001)NS(0.001)FLANMGGTVAHK;S(0.992)PT(0.008)GPSNSFLANMGGTVAHK;S(0.996)PT(0.004)GPSNSFLANMGGTVAHK 259.53 1.5128999999999997e-98 154335400.0 24204.8 24210.699999999997 24463.3 27184.9 34283.100000000006 29041.5 28392.2 30832.199999999997 28880.7 33253.2 32379.800000000003 True False 26662.05347736803 26251.020656459023 26123.526647773302 28864.04953161258 31875.17332627436 28804.995652678634 29472.68070780797 30217.227583606993 27666.944614339624 31153.587276973398 28397.289872463836 0.9388942957976274 0.9244199279000213 0.9199302738077358 1.0164367677776658 1.1224723721675618 1.0143572073971094 1.0378694882565858 1.0640884295408735 0.9742811633995957 1.0970619878477303 1.0 14.793465630613106 -6.261743080643209 24.961683913140444 1.0096700226329054 0.9274153390387953 0.438983471194908 0.048362930571860634 21.543033837580605 1770729.3975403996 0.006583699739365604 0.016230109316168258 5.473396616130038e-07 6.261743080643209 -0.08225468359411015 S(ph)PTGSTTSR ddPTM_A549_MK2206_60min_R1 1 SPTGSTTSR 9 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.977)PT(0.01)GS(0.005)T(0.007)TSR 53.567 0.021587000000000002 100420000.0 1303.9 837.64 595.0 446.49 1153.0 740.66 719.35 1024.9 992.02 1275.5 1278.2 True False 1523.9664427056653 880.2722981502865 679.3799469479474 555.8800700436975 983.3952273698638 819.0361495896824 850.0465835827791 1170.1827136246125 767.3290539304178 987.363664126778 960.7876634746385 1.5861636245352277 0.9161985854052576 0.7071072753900745 0.5785670353357643 1.0235302395676753 0.8524632244211805 0.884739277884387 1.2179410270451514 0.7986458226944882 1.0276606389345475 1.0 9.90807381671521 -5.262936242429502 6.183282691028792 0.8929022911160449 1.6024948919386648 0.5903796152491796 0.16412354056743178 0.06395636055568503 12.768050117757644 0.022126460508312015 0.19027663309458712 5.458379881733429e-06 5.262936242429502 0.7095926008226199 S(ph)PTGSTTSR ddPTM_A549_PD325901_60min_R1 1 SPTGSTTSR 9 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.994)PT(0.005)GS(0.001)TTSR 76.332 0.0020012 111440000.0 1225.9 1108.2 1157.3 887.27 894.34 833.45 766.75 944.77 946.85 926.96 1400.0 True False 1350.3524655401186 1201.591903228238 1235.8413374102452 942.0746527636255 831.524643705505 826.662659529467 795.9290908316992 925.9258211922723 907.0571872595706 868.4315874040166 1227.8088753312056 1.0998067310564572 0.9786473508786979 1.0065421111057473 0.7672811882138396 0.677242737377345 0.6732828505629362 0.6482516186544055 0.7541286268536711 0.7387608979572564 0.707301930171953 1.0 10.261870288308604 -2.18408439869069 10.005618895379698 0.8473326773168791 1.1384409248707874 0.0 0.15811115815275853 0.0 0.0 0.02283163271701405 0.0 0.006545089675977753 2.18408439869069 0.2911082475539083 S(ph)PTKAPHLQLIEGK ddPTM_A549_MK2206_60min_R1 2 SPTKAPHLQLIEGK 14 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 S(0.865)PT(0.135)KAPHLQLIEGK;S(0.961)PT(0.039)KAPHLQLIEGK 131.25 3.7597e-09 43420000.0 3730.6000000000004 4589.1 5357.9 4513.3 7433.6 5452.6 5536.1 6079.799999999999 7336.1 6282.1 5564.700000000001 True False 4360.234075586896 4822.665588369082 6117.730786138493 5619.058702609736 6340.127287230378 6029.590512857051 6541.937709560884 6941.63026860661 5674.48506334443 4862.969246892064 4182.831412093037 1.0424120998472393 1.1529667618030723 1.4625812478244866 1.3433624616962578 1.5157501373113809 1.4415093315558511 1.5639974613003538 1.6595529641805726 1.3566133808163663 1.1626022585640605 1.0 12.030264136376108 -10.269194036678718 0.9331869454924527 1.0241888946739452 1.3991893173979357 0.3129642187433692 0.17301466809629748 0.39609195684971205 0.6743467481753712 0.08422140937929196 0.03422603230522953 5.3802934484875075e-11 10.269194036678718 0.3750004227239905 S(ph)PTKAPHLQLIEGK ddPTM_A549_PD325901_60min_R1 2 SPTKAPHLQLIEGK 14 1 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 S(0.87)PT(0.13)KAPHLQLIEGK;S(0.5)PT(0.5)KAPHLQLIEGK 130.27 4.1547e-09 58796000.0 4787.7 4959.9 5381.4 5187.1 6599.299999999999 5362.1 5173.700000000001 6126.6 6141.5 5244.7 5379.200000000001 True False 5273.74377948154 5377.888179770561 5746.614164987032 5507.495386241171 6135.787934349067 5318.432835398587 5370.587984657273 6004.4001567752775 5883.39411264155 4913.548746933896 4717.5925015583025 1.1178887913145383 1.1399645429303509 1.2181243214815238 1.167437709895874 1.3006184684926283 1.1273616433894653 1.1384171021306473 1.2727678693723377 1.2471179125153695 1.0415373403512207 1.0 12.20383509082508 -10.830849174903095 1.0594066855774404 0.9991819511092039 1.195850200675587 0.5459731984952512 0.059869736827446986 0.2916981360898061 0.5773465731947585 0.04276216573012723 0.010364378438861014 1.476219116887152e-11 10.830849174903095 0.19666824956638296 S(ph)PTKGEDWETLK ddPTM_A549_MK2206_60min_R1 1 SPTKGEDWETLK 12 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 S(0.871)PT(0.128)KGEDWET(0.001)LK 44.61600000000001 0.016303 4365500.0 955.34 1066.6 980.56 875.07 1545.4 795.49 918.87 1106.7 1568.1 1357.1 1681.6 True False 1116.5780361794853 1120.8853841830557 1119.6181525702175 1089.462189283385 1318.0737071790018 879.6682237964743 1085.8167849540675 1263.5781141266052 1212.9278537411424 1050.5301674531165 1264.0123102010264 0.8833600963917089 0.8867677752321828 0.8857652283403438 0.861907894797416 1.0427696760084382 0.6959332727199258 0.8590239004724417 0.9996564937928871 0.9595854755150608 0.8311075445824115 1.0 10.303794798635561 -8.26045266265847 24.926632200372833 0.9817877017936529 0.87383566679245 0.09823498225627258 0.08780056035256435 75.66907781846749 1911573.1620707777 0.011687141372733592 0.01464440346825435 5.489683889436366e-09 8.26045266265847 -0.10795203500120298 S(ph)PTKSSLDYR ddPTM_A549_MK2206_60min_R1 2 SPTKSSLDYR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 S(0.965)PT(0.033)KS(0.001)S(0.001)LDYR;S(0.836)PT(0.061)KS(0.049)S(0.049)LDY(0.004)R 47.915 0.0089817 25793000.0 3448.1 4820.6 5123.8 4272.2 5803.8 3723.2 3866.3 2634.3 6793.1 7610.5 7715.0 True False 4030.05498204878 5065.947949552637 5850.431886003179 5318.889191786346 4950.0687082473705 4117.1865527398595 4568.756663802182 3007.7200922054 5254.47369635161 5891.2827642782 5799.152576832138 0.6949386015724127 0.8735669362781237 1.0088425521645876 0.9171838680422956 0.8535848372093375 0.7099634814210951 0.7878317742586322 0.518648208053944 0.9060761252158559 1.0158868362619267 1.0 12.501626381018843 -8.984571443720414 19.184397592161908 0.958566068319998 0.8021684684249614 0.2959241450730453 0.12405124655777332 7.984172470971363 9929.422862228324 0.023294841724039377 0.02360750724032009 1.0361641359742647e-09 8.984571443720414 -0.15639759989503665 S(ph)PTKSSLDYR ddPTM_A549_PD325901_60min_R1 3 SPTKSSLDYR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 S(0.945)PT(0.046)KS(0.003)S(0.006)LDYR;S(0.963)PT(0.022)KS(0.006)S(0.008)LDY(0.001)R;S(0.895)PT(0.084)KS(0.011)S(0.01)LDYR 50.46 0.007564499999999999 98220100.0 14008.9 14232.1 17628.8 18754.6 15223.2 29682.6 23792.4 25322.8 21151.1 18063.600000000002 21950.1 True False 15431.073215192897 15431.489014559304 18825.196378586148 19913.029047213015 14153.974949188954 29440.87474683465 24697.832801700843 24817.716888647705 20262.19282193156 16923.061213246732 19250.376853148216 0.801598500273998 0.8016200998182345 0.977913135010002 1.0344228167126208 0.7352570319616474 1.5293661506694023 1.2829791847769332 1.2892068076365477 1.0525608395358697 0.8791028530165697 1.0 14.232599068413942 -6.074656269838714 1.0918509768517095 1.0876594090066647 0.7764515716258723 0.25533058298841327 0.20127056713497377 0.808976020483778 1.52687297464177 0.03094009611493623 0.20656207539772972 8.420613425327605e-07 6.074656269838714 -0.3112078373807924 S(ph)PTKTDPK ddPTM_A549_PD325901_60min_R1 2 SPTKTDPK 8 1 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 S(0.998)PT(0.002)KTDPK;S(0.994)PT(0.006)KTDPK 94.69200000000001 0.00070508 132168000.0 19943.7 19838.6 16836.1 14409.8 18651.8 11848.9 10589.900000000001 13471.0 14598.2 20433.4 24176.0 True False 21968.369742224037 21510.46844557275 17978.69898969381 15299.86061896976 17341.761913216837 11752.406486890273 10992.904439515642 13202.310337204935 13984.688420607969 19143.23163681415 21202.50526429086 1.0361214143511164 1.0145248487121266 0.8479516342803808 0.7216062643662068 0.8179109825490167 0.5542932941365005 0.518471958973161 0.6226769041034124 0.6595771700696569 0.9028759289618041 1.0 14.371947121641103 -5.84602566259617 2.9647434712565413 0.7695659970039718 1.0347376718869858 0.3760741558729823 0.1410853020501849 0.2911157845204528 5.038851943948903 0.025675143323503336 0.10349092169750276 1.4255233564943875e-06 5.84602566259617 0.2651716748830141 S(ph)PTKTDPKNEEEEK ddPTM_A549_MK2206_60min_R1 4 SPTKTDPKNEEEEK 14 2 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 S(0.983)PT(0.017)KTDPKNEEEEK;S(0.982)PT(0.018)KT(0.001)DPKNEEEEK;S(0.956)PT(0.036)KT(0.008)DPKNEEEEK;S(0.936)PT(0.033)KT(0.031)DPKNEEEEK 141.07 1.3527000000000001e-13 465968000.0 26624.7 25749.5 26356.5 23453.8 35484.3 28734.4 27217.699999999997 30264.600000000002 36446.8 32384.0 35057.299999999996 True False 31118.298448581594 27060.03956499307 30094.24801972029 29199.982052881085 30264.60647576799 31775.055135648967 32162.803778384667 34554.69973145032 28191.657993579942 25068.431908335217 26351.604877741687 1.180888169542424 1.0268839294812655 1.1420271425343012 1.1080912220851233 1.1484919653349646 1.2058110040382506 1.2205254263489471 1.311293937950531 1.0698269848980806 0.9513056993925132 1.0 14.685603207774463 -8.97386682108039 14.597722343973969 1.0307906530077855 1.164533907977908 0.49758056963801434 0.07186350003526819 1.338608734580201 747.4094028226791 0.012940943287648778 0.013464434449526923 1.062021182218707e-09 8.97386682108039 0.13374325497012252 S(ph)PTKTDPKNEEEEK ddPTM_A549_PD325901_60min_R1 3 SPTKTDPKNEEEEK 14 2 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 S(0.931)PT(0.066)KT(0.003)DPKNEEEEK;S(0.973)PT(0.017)KT(0.01)DPKNEEEEK;S(0.907)PT(0.089)KT(0.004)DPKNEEEEK 133.93 2.084e-09 399598000.0 20673.1 20566.800000000003 21112.300000000003 19444.0 26391.1 19661.4 22594.4 22688.7 20848.4 25698.1 24142.3 True False 22771.81789326814 22300.036415190883 22545.107636573335 20645.011719472022 24537.48018035239 19501.28407711641 23454.242256130095 22236.156079559183 19972.21425026397 24075.51758033481 21172.95015064896 1.0755146416178651 1.0532323675502242 1.0648070994434526 0.9750654288882479 1.1589070018945993 0.9210470878343179 1.10774559469745 1.0502152945784757 0.9432891547072296 1.1370884741631946 1.0 14.369934682016304 -8.747068081884223 24.684568291207036 0.9732198802419155 1.0500136197134744 0.0 0.07791944521922921 191.53335271340404 328982.9698418122 0.009428001015977829 0.01066520958137753 1.7903251729061932e-09 8.747068081884223 0.07679373947155888 S(ph)PTKTDPKNEEEEKR ddPTM_A549_MK2206_60min_R1 4 SPTKTDPKNEEEEKR 15 3 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 S(0.998)PT(0.002)KTDPKNEEEEKR;S(0.946)PT(0.023)KT(0.031)DPKNEEEEKR;S(0.992)PT(0.008)KTDPKNEEEEKR;S(0.979)PT(0.01)KT(0.01)DPKNEEEEKR 106.94 7.727700000000001e-07 228861000.0 13148.400000000001 15424.5 14252.300000000001 13197.0 22074.2 13745.4 12991.6 13258.8 20900.8 21770.800000000003 20285.8 True False 15367.528472483442 16209.541166633744 16273.490450228954 16430.265592435844 18827.11442151593 15199.929104541927 15352.005554005756 15138.27550337205 16166.802171719204 16852.761159522746 15248.27600040199 1.0078207183604435 1.0630409081135739 1.0672347778725895 1.077516277381305 1.2347044623942793 0.9968293533079551 1.0068027069814995 0.9927860371213743 1.0602380342074738 1.1052240370700568 1.0 13.89635851755157 S(ph)PTKTDPKNEEEEKR ddPTM_A549_PD325901_60min_R1 3 SPTKTDPKNEEEEKR 15 3 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 S(0.987)PT(0.011)KT(0.002)DPKNEEEEKR;S(0.534)PT(0.423)KT(0.043)DPKNEEEEKR;S(0.977)PT(0.019)KT(0.004)DPKNEEEEKR 106.39 8.198700000000001e-07 250449000.0 11654.400000000001 12505.2 11987.699999999999 13174.599999999999 13651.099999999999 13994.800000000001 14809.0 15158.599999999999 12452.7 13179.0 15172.4 True False 12837.546108484177 13559.057091003218 12801.25740989613 13988.365120312497 12692.293829738383 13880.830988761152 15372.564598795734 14856.249831308349 11929.356324430753 12346.87569085779 13306.290985767988 0.9647726870105903 1.0189959850949886 0.9620455034079725 1.0512595234294844 0.9538566264117989 1.0431780729586986 1.1552854672453632 1.1164831617764974 0.8965200247905323 0.9278976165532259 1.0 13.699820867993907 -8.774411003773405 24.998884639545093 0.9511344619496649 1.0327417506384826 0.28938082416014976 0.0635477837790559 260.81779080444124 502646.1066401732 0.012459218305095696 0.013304237215178991 1.6810823801436079e-09 8.774411003773405 0.08160728868881773 S(ph)PTLGIAR ddPTM_A549_PD325901_60min_R1 2 SPTLGIAR 8 0 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 S(0.994)PT(0.006)LGIAR;S(0.99)PT(0.01)LGIAR 74.173 0.0050747 13432600.0 3555.5 3306.3 3590.0 4135.6 4144.6 3563.3 3564.7 3529.7 3949.3 4486.3 4563.200000000001 True False 3916.4517425792387 3584.9335044608597 3833.638988423727 4391.046619370938 3853.4975940937898 3534.2816662083505 3700.356609178689 3459.2973645039156 3783.324655060697 4203.03425236325 4001.9553285081106 0.9786345476373054 0.8957954825041207 0.9579414745373657 1.097225295867527 0.9629037002595268 0.8831387099780286 0.9246371599450475 0.8644017937585294 0.9453690370079875 1.0502451695107 1.0 11.9664893480328 -10.444400994256211 1.0883914880689518 0.9962810954495074 0.9456583333212192 0.17148034691187153 0.061102275797593364 0.887564622095849 2.0446476801478513 0.02830374595104836 0.011014931229876943 3.594173234782976e-11 10.444400994256211 -0.0506227621282882 S(ph)PTLLR ddPTM_A549_MK2206_60min_R1 1 SPTLLR 6 0 Q5JT35;P55197-1;P55197;H0Y5P4 Q5JT35 MLLT10 Protein AF-10 1 S(0.983)PT(0.017)LLR 66.429 0.056027 20151000.0 707.85 822.51 604.16 401.86 981.44 721.02 654.05 670.78 757.09 922.17 896.57 True False 827.317774729047 864.3722457757415 689.8389726858352 500.3157180401811 837.0714761057061 797.3178578256599 772.8824188396704 765.8651191775951 585.6103238242982 713.8511565251198 673.9269249268164 1.2276075404152873 1.2825904616729864 1.0236109393622266 0.7423886767760641 1.242080476598566 1.183092451621877 1.146834159984927 1.13642160722509 0.8689522590121939 1.0592411879116403 1.0 9.396448355720139 -8.75117894003001 24.96430636017698 0.9381163442681063 1.119149223004497 0.1548578960918131 0.1455717416695475 218.75689801266276 532249.0197985461 0.025307649763506787 0.028539025542346795 1.7734586216743437e-09 8.75117894003001 0.18103287873639073 S(ph)PTLLR ddPTM_A549_PD325901_60min_R1 2 SPTLLR 6 0 Q5JT35;P55197-1;P55197;H0Y5P4 Q5JT35 MLLT10 Protein AF-10 1 S(0.999)PT(0.001)LLR;S(0.996)PT(0.004)LLR 96.19 0.035111 105380000.0 4157.4 5083.1 5239.4 5557.0 5181.6 5097.9 5361.7 5765.0 4966.8 6120.6 5501.9 True False 4579.456187483878 5511.4706761410025 5594.9771910716645 5900.243269137317 4817.662291549575 5056.384392603359 5565.7424275348185 5650.012552444992 4758.062668512264 5734.144271451871 4825.201179417687 0.9490705189698504 1.1422260898987295 1.1595324180342002 1.2227973611349752 0.9984376013376872 1.0479116216276751 1.153473652306141 1.1709382349788044 0.9860858628668566 1.1883741336861475 1.0 12.236373379270281 -8.779556538258 24.930322943475492 0.9934294175024945 1.108584707305134 0.0 0.09631098320711959 198.06503924711342 272548.5211788901 0.013062281627367006 0.013919663229284587 1.6612823910523325e-09 8.779556538258 0.11515528980263956 S(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A549_MK2206_60min_R1 4 SPTMEQAVQTASAHLPAPAAVGR 23 0 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.779)PT(0.221)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQT(0.001)ASAHLPAPAAVGR 100.94 1.1924e-10 19280800.0 2999.3099999999995 3929.1800000000003 3730.12 3409.12 5306.570000000001 3646.7799999999997 3274.6900000000005 3609.16 5918.21 4948.219999999999 4965.72 True False 3505.520201910825 4129.158479115304 4259.107105394078 4244.354553041211 4525.980582570774 4032.679839063352 3869.6587847260603 4120.769482588938 4577.744884439368 3830.413665311958 3732.594677100051 0.9391644432806067 1.1062434677004238 1.141058023664945 1.137105665150538 1.212556136978453 1.0803958607679431 1.0367208656399034 1.1039959703823161 1.2264243188590562 1.0262066998091273 1.0 11.865963139382362 -5.262756790893564 5.639505775033738 1.1133479280629166 0.9334414849973242 0.32950465146992314 0.06839007677279958 0.15243644182924565 19.804312455416557 0.011674340351259352 0.10518331521904412 5.4606357636088076e-06 5.262756790893564 -0.17990644306559245 S(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A549_PD325901_60min_R1 2 SPTMEQAVQTASAHLPAPAAVGR 23 0 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.965)PT(0.035)MEQAVQTASAHLPAPAAVGR 176.85 2.8180999999999997e-41 11209700.0 3243.7 3803.2 3494.2 3575.7 3767.1000000000004 4135.3 3468.6 4080.5 3335.5 3875.4 4493.9 True False 3572.9980361142666 4123.709011331559 3731.3374243315293 3796.562867996097 3502.5118917894883 4101.623487854345 3600.599471090751 3999.111226409676 3195.3205345137017 3630.7065826200987 3941.178789179216 0.9065810579119589 1.046313611210304 0.9467566999437272 0.9633064296448128 0.8886965243510093 1.0407098249680122 0.9135844029650344 1.0146992664706096 0.8107524944787279 0.9212235163216801 1.0 11.944411482605615 S(ph)PTNSLLK ddPTM_A549_MK2206_60min_R1 2 SPTNSLLK 8 0 Q14106-2;Q14106 Q14106-2 TOB2 Protein Tob2 1 S(0.924)PT(0.076)NS(0.001)LLK;S(0.995)PT(0.005)NSLLK 68.657 0.0074351 7417900.0 2922.0 4361.1 3624.5 3352.8999999999996 4465.200000000001 3231.6000000000004 3032.7 3032.4 5623.9 5052.2 5318.799999999999 True False 3415.162163958855 4583.06136223582 4138.508601198043 4174.3606505174 3808.3749950146716 3573.5657670375303 3583.702334095357 3462.2519863355183 4350.095629522868 3910.904511094714 3997.9951685877845 0.8542186821014084 1.1463398951166563 1.0351459735905315 1.0441134805052588 0.9525711849121387 0.8938394411066345 0.8963748536397635 0.8659970411016011 1.0880692562366092 0.9782164175241278 1.0 11.965061013308246 -8.795227428407161 24.999944420041036 1.041588248965041 0.9678060597325078 0.07289790244661432 0.08749580494593229 294.08807771819136 217595.8920901342 0.01581329865274981 0.016835015395438566 1.602406033743211e-09 8.795227428407161 -0.07378218923253321 S(ph)PTNSLLK ddPTM_A549_PD325901_60min_R1 2 SPTNSLLK 8 0 Q14106-2;Q14106 Q14106-2 TOB2 Protein Tob2 1 S(0.995)PT(0.005)NSLLK;S(0.998)PT(0.002)NSLLK 86.014 0.0028706 26312000.0 11214.7 11666.3 12041.2 12088.900000000001 13394.900000000001 13332.900000000001 12222.3 12461.2 12115.0 13409.4 13825.4 True False 12353.208088174204 12649.46004388341 12858.388241617771 12835.603897116096 12454.088433896362 13224.321282908906 12687.426314799182 12212.651590377713 11605.848681047366 12562.728195537473 12124.963446431468 1.0188243571002198 1.0432575817460554 1.0604888252592761 1.0586096983982067 1.02714441069608 1.0906689608867228 1.0463888300243291 1.0072320336744647 0.9571862820306577 1.0361044180495937 1.0 13.565692777510531 -8.404683775687248 3.3345123695464407 0.9798447268155329 1.0506646032940774 0.4068310166308444 0.026211353769756748 0.10900038274704019 2.274013377499887 0.003807943803541108 0.004621335207426139 3.93836736756964e-09 8.404683775687248 0.07081987647854449 S(ph)PTPDGSER ddPTM_A549_MK2206_60min_R1 2 SPTPDGSER 9 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 S(0.989)PT(0.011)PDGSER;S(0.984)PT(0.015)PDGSER 53.683 0.021345 4730400.0 680.5999999999999 554.78 514.14 339.78999999999996 545.44 570.81 518.54 406.99 821.64 706.45 624.3199999999999 True False 795.4686409275829 583.0159323430299 587.0527830652396 423.03856525375267 465.206498539999 631.212735326988 612.7520059095218 464.6820788546011 635.5398518894663 546.8624543491668 469.2841136445675 1.6950683345101796 1.2423517340384593 1.2509538805949636 0.9014551163224739 0.9913109884055081 1.3450545564494945 1.3057164904875 0.9901934997240244 1.3542752320203613 1.165312096550868 1.0 8.874317812395047 -2.000040864711539 0.019072000844889355 2.1985020420290232e-10 2.784103164868879 0.13281572739910774 0.20310081069109812 5096.494464436487 7.288968836847343 397.2611908180519 709.3138665231053 0.00999905909951127 2.000040864711539 2.7841031646490286 S(ph)PTPDGSER ddPTM_A549_PD325901_60min_R1 2 SPTPDGSER 9 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 S(0.989)PT(0.011)PDGSER;S(0.993)PT(0.007)PDGSER 68.893 0.004256 6338100.0 753.24 584.13 462.03 645.03 1046.04 754.15 781.1800000000001 760.1700000000001 879.68 782.84 683.3199999999999 True False 829.7083702940192 633.3566851044133 493.38613421209345 684.8720381305822 972.5697590420941 748.008452437636 810.9082323780989 745.007813008172 842.7101087696035 733.4113487996902 599.2759719223712 1.3845180003337387 1.0568698142071626 0.8233037153640552 1.1428324682093192 1.6229079833157043 1.2481869580690135 1.3531465808262741 1.2431798502087756 1.4062137450068932 1.2238290590010417 1.0 9.22707671972615 -5.209968755735044 20.630061081517045 1.2065107653224805 1.3845257193432736 0.05560300274884955 0.20317773981907924 11828.632300273794 4739853.607779832 0.03132890500281469 23.666350705361985 6.166393628916516e-06 5.209968755735044 0.17801495402079315 S(ph)PTPPLFSLPEAR ddPTM_A549_PD325901_60min_R1 2 SPTPPLFSLPEAR 13 0 A0A087WWS1;Q96FV9;J3KRD7;J3QQZ3;J3KT14;Q96FV9-2 A0A087WWS1 THOC1 THO complex subunit 1 1 S(0.997)PT(0.003)PPLFSLPEAR;S(0.998)PT(0.002)PPLFSLPEAR 98.94200000000001 0.00015873 6394800.0 1999.18 2248.6 2140.4 1739.71 2483.6 2595.8 2542.6 2463.2 2360.2 2609.4 2600.8 True False 2202.135281881469 2438.0974134623857 2285.660415270793 1847.1679355319213 2309.160503954864 2574.6606654347465 2639.360034364105 2414.069543656983 2261.009001816591 2444.642038677009 2280.9180878295706 0.9654600459488363 1.0689105524970344 1.0020791309720967 0.8098352787800511 1.0123820387395708 1.1287826069566091 1.1571481012172662 1.0583762549553517 0.9912714594534501 1.0717798467735558 1.0 11.155398922279268 -6.976345928223971 24.997907946585478 1.0246499587268731 0.9645039098871419 0.18694241938772138 0.07961026897090845 452.030488070388 477708.97542796115 0.012539257396010585 0.023696144544225754 1.0559760584028894e-07 6.976345928223971 -0.06014604883973129 S(ph)PTPPPSSKPSSIPR ddPTM_A549_MK2206_60min_R1 2 SPTPPPSSKPSSIPR 15 1 H7C5F9;B4E2D5;R4GND2;F6S7C4;Q8NEM7-2;Q8NEM7;Q8NEM7-3 H7C5F9 SUPT20H Transcription factor SPT20 homolog 1 S(0.983)PT(0.017)PPPSSKPSSIPR;S(0.983)PT(0.017)PPPSSKPSSIPR 79.393 0.00012612 28438000.0 4944.1 5491.1 5031.3 4384.4 6851.2 4847.3 4341.3 4786.1 7124.700000000001 6877.299999999999 7287.7 True False 5778.5432083603655 5770.573535615583 5744.813995091106 5458.578196823195 5843.397555729756 5360.23806862267 5130.058015302595 5464.544331816528 5510.966825808 5323.713153507712 5477.962959712195 1.0548708070607258 1.0534159464120878 1.0487135523444524 0.9964613191013584 1.0667099428574378 0.97850936708493 0.9364900882009837 0.9975504347155404 1.006024842872895 0.9718417580880127 1.0 12.419423795681611 -6.601232292670748 1.108644411133971 0.9970384674439783 1.0541539512343887 0.4587009296545933 0.028853870924508765 0.4208328896649987 0.9772531668340965 0.004466546589846665 0.015871873427469763 2.504769159673769e-07 6.601232292670748 0.057115483790410426 S(ph)PTPPPSSKPSSIPR ddPTM_A549_PD325901_60min_R1 2 SPTPPPSSKPSSIPR 15 1 H7C5F9;B4E2D5;R4GND2;F6S7C4;Q8NEM7-2;Q8NEM7;Q8NEM7-3 H7C5F9 SUPT20H Transcription factor SPT20 homolog 1 S(0.996)PT(0.004)PPPSSKPSSIPR;S(0.908)PT(0.09)PPPS(0.001)S(0.001)KPSSIPR 87.083 1.1264000000000001e-05 49394000.0 4459.700000000001 5649.4 5008.3 5527.4 5622.7 5776.4 5402.7 5578.3 5956.1 6646.4 6109.9 True False 4912.445460942381 6125.494764571024 5348.193355354472 5868.814944363799 5227.780949261962 5729.358913559316 5608.30270497088 5467.03643040831 5705.785829895683 6226.74516971828 5358.421033847239 0.9167710842265306 1.1431529411142671 0.9980912887531304 1.0952508037895088 0.9756196678536325 1.0692252208941764 1.0466334521951945 1.0202700377359273 1.0648259615760434 1.1620485083919583 1.0 12.387592228959011 -6.143938156509786 17.04084315956957 1.0343539026301425 1.0317660649781426 0.0 0.07000222621499226 59.55475876866274 8422.795830004894 0.0073891279005795125 0.019550755293336646 7.178965123836668e-07 6.143938156509786 -0.0025878376519998803 S(ph)PTPPPTLHLVPEPAAPPPPPPR ddPTM_A549_MK2206_60min_R1 2 SPTPPPTLHLVPEPAAPPPPPPR 23 0 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 S(0.498)PT(0.498)PPPT(0.004)LHLVPEPAAPPPPPPR;S(0.41)PT(0.375)PPPT(0.215)LHLVPEPAAPPPPPPR 125.05 2.0265e-16 22696700.0 3688.2 3857.0 2747.3 3040.3 5253.5 3826.7000000000003 3284.0 3621.5 5907.5 5572.200000000001 5429.200000000001 True False 4310.677992167369 4053.3048254210084 3136.9084508404944 3785.1736364842513 4480.71710926937 4231.638854042123 3880.660291215469 4134.858715378605 4569.46068233901 4313.436149939027 4080.979801702792 1.0562850593793027 0.9932185461270266 0.7686655174160913 0.9275158957917128 1.0979513075266354 1.0369173727045815 0.9509138686734643 1.0132024455630317 1.1196969611151713 1.0569609161356894 1.0 11.99469985483778 -6.745648612225882 24.606094850053598 1.047164112410103 0.9284955951774275 0.2826937010531143 0.07789801760947812 194.70987813337757 303406.08098789584 0.012033396349870579 0.024980507069073843 1.7961863338732237e-07 6.745648612225882 -0.11866851723267546 S(ph)PTPPPTLHLVPEPAAPPPPPPR ddPTM_A549_PD325901_60min_R1 2 SPTPPPTLHLVPEPAAPPPPPPR 23 0 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 S(0.483)PT(0.483)PPPT(0.034)LHLVPEPAAPPPPPPR;S(0.846)PT(0.153)PPPT(0.001)LHLVPEPAAPPPPPPR 133.58 1.1826e-22 38415000.0 5272.299999999999 4944.799999999999 5235.3 4842.7 6007.799999999999 5390.700000000001 5113.2 5075.9 5678.1 6630.5 6535.799999999999 True False 5807.540014737874 5361.515649777109 5590.598940416366 5141.822580430321 5585.83285378484 5346.799926480887 5307.785624050399 4974.657192533481 5439.469203124643 6211.849098431789 5731.938033849782 1.013189601918518 0.9353757172730836 0.9753418315762064 0.8970478309544603 0.9745103350381454 0.9328083965502638 0.9260019198926149 0.8678839797562007 0.9489755770215984 1.083725794268519 1.0 12.484807297831432 -10.162950032955358 1.0437896604540122 0.9946089936965198 0.9401180756716148 0.3362660691881205 0.04612048202230787 0.4664161335800771 1.013289624842315 0.014117340238567807 0.006793912733599018 6.871474941027751e-11 10.162950032955358 -0.05449091802490502 S(ph)PTPRPGSIPTR ddPTM_A549_MK2206_60min_R1 2 SPTPRPGSIPTR 12 1 Q309B1-2;J3QLP0 Q309B1-2 TRIM16 1 S(0.978)PT(0.022)PRPGSIPTR;S(0.97)PT(0.029)PRPGS(0.001)IPTR 82.65100000000001 0.00017613 14456600.0 1835.87 2180.31 1900.1 1907.66 3613.3 1948.69 2411.0 2409.8 3651.1000000000004 3139.2 3565.8999999999996 True False 2145.7199732878667 2291.278466143032 2169.5627515895694 2375.0367856381126 3081.7883565095685 2154.8990823642685 2849.0474915105046 2751.396529702987 2824.131679608625 2430.052539730912 2680.3886161666514 0.8005257000220217 0.8548306959383732 0.809420969222128 0.8860792689959873 1.1497543072380965 0.8039502441426162 1.0629232919161775 1.0264916486766338 1.0536276950942833 0.9066045591576356 1.0 11.388226469662753 -6.560472963581277 9.640047662435691 1.0190391108236663 0.8286556309747106 0.45517579350562576 0.08601309882918846 0.18400922987052007 45.34006744356719 0.010362419544084078 0.021629795648654197 2.751230873836128e-07 6.560472963581277 -0.19038347984895565 S(ph)PTPRPGSIPTR ddPTM_A549_PD325901_60min_R1 1 SPTPRPGSIPTR 12 1 Q309B1-2;J3QLP0 Q309B1-2 TRIM16 1 S(0.914)PT(0.085)PRPGSIPTR 40.624 0.028964999999999998 9101800.0 2333.6 2568.9 2312.8 2050.3 2413.8 1781.8 2247.2 2824.2 2547.1 2424.5 3026.7 True False 2570.5053540944773 2785.3902185553343 2469.7605159962104 2176.9423744308524 2244.2630151579374 1767.2896115539068 2332.7184257150234 2767.8691154579587 2440.0542447788466 2271.416656232241 2654.435087832113 0.9683813199567892 1.049334463413145 0.930427919415906 0.8201151289816506 0.8454766987693926 0.6657874662880752 0.8788003279523264 1.042733773429166 0.9192367355163498 0.8557062354413479 1.0 11.374189146557807 -9.493269605552829 0.701743195952158 0.9868271332756783 0.8908541729223607 0.0 0.1078804116085618 1.0617091444448978 1.1385501767978519 0.04203076660392748 0.026045302100104632 3.2116661503040267e-10 9.493269605552829 -0.0959729603533176 S(ph)PTPSAASSSASNSELEAGSEEDRK ddPTM_A549_MK2206_60min_R1 2 SPTPSAASSSASNSELEAGSEEDRK 25 1 Q8WYL5;Q8WYL5-2;F8VS18 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 S(0.479)PT(0.447)PS(0.04)AAS(0.006)S(0.006)S(0.006)AS(0.004)NS(0.012)ELEAGSEEDRK;S(0.859)PT(0.081)PS(0.04)AAS(0.004)S(0.004)S(0.004)AS(0.004)NS(0.004)ELEAGSEEDRK 41.434 0.03307 7412800.0 1725.01 1670.45 1823.46 2288.4 2865.2 1974.3899999999999 1982.52 1787.56 2852.5 3284.3999999999996 3079.9 True False 2016.149515554644 1755.4687699311712 2082.054047162528 2849.058102730179 2443.7328755074886 2183.3186393059873 2342.7182218454595 2040.9521041729072 2206.4133045064796 2542.451758885132 2315.0758290842887 0.8708783920706896 0.7582770066868756 0.8993459397768709 1.2306543340557028 1.0555735776802133 0.9430873113860737 1.0119401673214758 0.8815919023180294 0.9530630819031143 1.098215327093964 1.0 11.17684373363451 -6.002331063982796 24.899440784738097 0.9921701811459828 0.8181360811340751 0.41547372352693146 0.09299233717124848 66.94361972031433 715101.6636136542 0.012076332119870756 0.03668734633255256 9.946469059684917e-07 6.002331063982796 -0.17403410001190767 S(ph)PTPTLPLSTSSFDEQN ddPTM_A549_PD325901_60min_R1 1 SPTPTLPLSTSSFDEQN 17 0 Q96HE9 Q96HE9 PRR11 Proline-rich protein 11 1 S(0.478)PT(0.478)PT(0.043)LPLSTSSFDEQN 54.276 0.012947 1218700.0 1017.3 787.14 759.44 572.22 974.58 773.77 901.93 1117.4 888.17 955.56 1244.0 True False 1120.5755471033217 853.4750502680707 810.9801652837099 607.5647297940897 906.1288629184781 767.4686736626259 936.2534397050338 1095.1125804166575 850.8433035943733 895.2257785231102 1090.995886365729 1.0271125318685912 0.782289888471646 0.743339342905505 0.5568900280806548 0.8305520435433807 0.7034569820599226 0.8581640420513725 1.0037733359972987 0.7798776459448075 0.8205583446379818 1.0 10.091429946606878 -7.949984315885024 6.99087222652281 0.9026159989787842 0.7662982203051416 0.19538134000440566 0.12145961516278961 0.2668871339937415 29.61138209008113 0.02034928023768865 0.02812689710155782 1.1220589756185925e-08 7.949984315885024 -0.1363177786736426 S(ph)PTS(ph)SPTPQR ddPTM_A549_MK2206_60min_R1 2 SPTSSPTPQR 10 0 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 S(0.999)PT(0.15)S(0.636)S(0.202)PT(0.013)PQR;S(0.998)PT(0.053)S(0.917)S(0.032)PT(0.001)PQR 98.75399999999999 0.0005618999999999999 300960000.0 2185.6 2403.0 2375.1000000000004 2045.1100000000001 3191.3999999999996 2520.7 1892.67 2003.2 3500.2 3278.5 3858.2 True False 2554.4758472102935 2525.302435957139 2711.9248941110427 2546.1620418084763 2721.949287622015 2787.4388008947585 2236.5436398826973 2287.15973454271 2707.410288670841 2537.8845729828618 2900.102459097052 0.8808226203172251 0.8707631787407238 0.9351134769753623 0.8779558921519017 0.9385700422699876 0.9611518352226178 0.7711946979207921 0.7886479070311254 0.933556771478272 0.8751016933977681 1.0 11.501888155460927 -9.319081655150303 1.905254542478051 0.979191629101391 0.8815658326225086 0.04453721643749875 0.06490224701266238 0.25452284943626324 1.8975266418547663 0.01292510931630003 0.011420810784310367 4.796432586247712e-10 9.319081655150303 -0.09762579647888237 S(ph)PTS(ph)SPTPQR ddPTM_A549_PD325901_60min_R1 3 SPTSSPTPQR 10 0 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 2 S(1)PT(0.009)S(0.644)S(0.345)PT(0.001)PQR;S(0.999)PT(0.035)S(0.745)S(0.213)PT(0.008)PQR;S(1)PT(0.085)S(0.457)S(0.457)PT(0.001)PQR 101.93 0.00047457 417189900.0 4112.55 4223.81 4383.469999999999 3992.0099999999998 4558.53 4934.23 4404.57 4879.33 4161.96 5138.61 4736.2 True False 4530.053048500704 4579.765292162487 4680.95863414645 4238.58739118749 4238.354578874764 4894.047266818744 4572.188321623188 4782.0079353896635 3987.0472948057663 4814.15728763933 4153.67742524547 1.0906126270103875 1.1025808755218482 1.126943225224048 1.0204421184529038 1.020386068767555 1.1782444243439343 1.1007567159245606 1.1512708970430128 0.9598837094505825 1.1590108703144728 1.0 12.020173465440505 -8.771459339911916 24.999893974676905 0.9810561885246962 1.0974354774658857 0.0 0.07053220994360142 107.95299440545405 269342.8270029167 0.00821386893253517 0.008793770375725863 1.6925466988476393e-09 8.771459339911916 0.11637928894118943 S(ph)PTSAPTQR ddPTM_A549_MK2206_60min_R1 1 SPTSAPTQR 9 0 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;H0YID7 F8VV64 TNS2 Tensin-2 1 S(0.998)PT(0.002)SAPTQR 60.59 0.008017100000000001 9267000.0 597.49 758.4 651.65 649.57 1069.8 667.12 388.57 717.51 781.14 944.62 1202.3 True False 698.3317047719974 796.999320611691 744.0637687876134 808.7146791603055 912.4338371554906 737.7141956015838 459.1681392684513 819.219239782218 604.2130372242564 731.2296859329177 903.7357282080726 0.7727167168179238 0.8818942260830845 0.8233200763932872 0.894857483131518 1.0096246155551076 0.816294158320291 0.5080778870819791 0.9064809702794047 0.6685727014713584 0.8091189305780796 1.0 9.819757148982585 -2.0143194390927195 24.791328135256737 0.8340390653576016 0.004228522765032605 0.0 0.13752724441539882 0.0 0.0 0.020390757073112446 0.0 0.009675659151983415 2.0143194390927195 -0.829810542592569 S(ph)PTSAPTQR ddPTM_A549_PD325901_60min_R1 2 SPTSAPTQR 9 0 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5;H0YID7 F8VV64 TNS2 Tensin-2 1 S(0.997)PT(0.001)S(0.002)APTQR;S(0.997)PT(0.003)S(0.001)APTQR 76.22800000000001 0.0020095 22043100.0 1976.8 1704.71 1647.3 1851.74 1856.54 1643.69 1539.26 1537.03 1663.78 2053.52 2082.6 True False 2177.483280756756 1848.3718943802662 1759.095684019612 1966.1177741933307 1726.1430351153022 1630.3043336036824 1597.8373816153917 1506.3727308732914 1593.857112550803 1923.8603967440843 1826.4534026891201 1.1921920797709966 1.012000575354879 0.9631210308621418 1.0764675251493305 0.9450791531685784 0.8926065845443174 0.8748306303696919 0.8247528946839989 0.8726513965284516 1.0533312231845335 1.0 10.834829232138715 -6.8523908458310085 5.040163450042641 0.9205082351484066 1.0502588873874015 0.4131771252560137 0.07882738009695393 0.17318017948087946 7.379015909350019 0.01146259025155327 0.02215917258157401 1.4047827127503234e-07 6.8523908458310085 0.12975065223899485 S(ph)PTSPLNMK ddPTM_A549_MK2206_60min_R1 3 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 S(0.562)PT(0.248)S(0.191)PLNMK;S(0.999)PT(0.001)SPLNMK;S(0.999)PT(0.001)SPLNMK 72.485 0.0026292 65954600.0 7385.0 8305.7 8474.800000000001 7801.5 10814.2 7886.6 7746.799999999999 7596.8 12056.7 10527.5 11781.800000000001 True False 8631.407454084923 8728.424653486976 9676.654074612547 9712.867850222647 9223.44550548412 8721.15477729861 9154.29328379659 8673.669664224268 9325.876700593612 8149.330438333717 8856.053898862065 0.9746335729950778 0.9855884746375033 1.0926597991748812 1.0967489540088138 1.0414847979492607 0.9847675812383224 1.0336763290219864 0.9794056995677012 1.0530510323330253 0.9201988302466004 1.0 13.112448287199843 S(ph)PTSPLNMK ddPTM_A549_PD325901_60min_R1 3 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 S(0.95)PT(0.038)S(0.013)PLNMK;S(0.999)PT(0.001)SPLNMK;S(1)PTSPLNMK 80.763 0.0016469999999999998 17304000.0 13915.5 16701.1 14776.5 18060.1 18718.1 16213.8 15417.1 15009.2 15969.2 16687.199999999997 19907.2 True False 15328.19131595033 18108.560309515542 15779.322148312876 19175.631359536965 17403.40522993941 16081.760188468263 16003.806177060835 14709.82973151039 15298.070058388896 15633.567344144638 17458.740602138114 0.8779666108375043 1.0372203082791578 0.903806437583501 1.0983398972769312 0.9968305060794633 0.9211294534325565 0.9166644113551295 0.8425481577811476 0.876241328456154 0.8954579084719345 1.0 14.091661872504151 -7.26233760668525 24.180467202184165 0.9285954691564475 0.987880996896343 0.19858618091215052 0.06769263896761364 85.38063810583077 2298471.416821962 0.010985011655454461 0.018181044973075433 5.4659089536125565e-08 7.26233760668525 0.05928552773989548 S(ph)PTSSPTPQR ddPTM_A549_MK2206_60min_R1 2 SPTSSPTPQR 10 0 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 S(0.971)PT(0.019)S(0.006)S(0.001)PT(0.002)PQR;S(0.996)PT(0.003)S(0.001)SPTPQR 72.2 0.0022524 126540000.0 1305.44 1583.31 875.31 1179.67 1704.08 1188.72 1137.02 1336.06 1486.0900000000001 1853.2400000000002 2147.7 True False 1525.7663570562802 1663.8937161362037 999.4421199378285 1468.6892029573985 1453.4120893811264 1314.509561391525 1343.6018161747286 1525.450596512146 1149.4929877980833 1434.5917968689216 1614.3668164954483 0.9451175169522459 1.0306788389941457 0.6190923337407724 0.9097617641483152 0.9002985409079884 0.814257049860038 0.8322778952378924 0.9449219229020537 0.7120395290913267 0.8886405383277193 1.0 10.656752709753263 -11.159650953565114 1.5610947345725938 0.9997196370323239 0.8368827464172617 0.030639549988698556 0.11466103871036205 0.4909326433204918 2.1524692251909596 0.08123776155839713 0.01739211139492103 6.9238722528160166e-12 11.159650953565114 -0.16283689061506224 S(ph)PTSSPTPQR ddPTM_A549_PD325901_60min_R1 4 SPTSSPTPQR 10 0 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 S(0.988)PT(0.011)S(0.001)SPTPQR;S(0.999)PT(0.001)SSPTPQR;S(0.99)PT(0.008)S(0.001)SPTPQR;S(0.988)PT(0.01)S(0.002)SPTPQR 115.89 8.4978e-05 146477000.0 5979.139999999999 5385.06 5875.37 6231.92 6982.75 6054.74 6269.3 6672.42 5365.29 6246.55 7452.68 True False 6586.137891189768 5838.877905069715 6274.107939669951 6616.85154468279 6492.305729179753 6005.432204882647 6507.881642192592 6539.333348687768 5139.805519598565 5852.14176695711 6536.0476064309805 1.007663696437814 0.893334665941646 0.9599238435008794 1.012362813601955 0.9933075950658332 0.9188170843452474 0.9956906733343442 1.000502710881964 0.7863782256636843 0.8953640057944257 1.0 12.674202776302318 S(ph)PTTAR ddPTM_A549_MK2206_60min_R1 1 SPTTAR 6 0 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 S(0.999)PT(0.001)T(0.001)AR 66.429 0.056027 8526200.0 1714.7 1627.2 1129.8 923.53 1140.7 698.75 636.23 752.17 670.46 2084.1 2373.1 True False 2004.0994396099427 1710.017529666857 1290.022628675278 1149.7948914588378 972.9045410761527 772.6912612072889 751.8247555054863 858.7924009240169 518.6018805046149 1613.3003625296888 1783.7937757719176 1.123503998517256 0.9586408209810382 0.723190452953024 0.6445783739554066 0.5454131269491277 0.43317297756177847 0.4214751535278467 0.4814415279324448 0.2907297287099208 0.9044208946359567 1.0 10.800733119724926 -5.68489530110668 1.6117127616313467 0.6008318073787557 1.1521344758536447 0.4436952847248724 0.19693194970071995 0.5109162754038262 2.1011746131358096 0.03875402152027812 0.3422533770378406 2.065878133780395e-06 5.68489530110668 0.551302668474889 S(ph)PTTTQS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SPTTTQSPK 9 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 S(0.92)PT(0.325)T(0.069)T(0.066)QS(0.62)PK 45.879 0.0489 2961600.0 1079.9 1247.8 1167.6 661.21 1192.7 590.74 1023.7 985.24 1366.9 1063.5 1396.2 True False 1262.1607189798663 1311.3076902152804 1333.1832370696181 823.2064796828447 1017.2554099601356 653.2517146985241 1209.6930390125683 1124.9007871709557 1057.299332490765 823.2546113671721 1049.485006840314 1.2026476898225114 1.2494772975968815 1.2703213751318227 0.7843908910726353 0.9692900835456314 0.6224497829323641 1.1526539503928623 1.07185979774756 1.0074458668771054 0.7844367532660098 1.0 10.035465840799887 -6.235793156659451 24.76999911859242 0.9777180807725196 1.2416816964869517 0.4450198407008431 0.149017936982064 496.4980156197038 479534.1062713492 0.01862972921306551 0.049270343054871976 5.810410866214459e-07 6.235793156659451 0.26396361571443205 S(ph)PTTTQSPK ddPTM_A549_MK2206_60min_R1 2 SPTTTQSPK 9 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.733)PT(0.137)T(0.116)T(0.014)QSPK;S(0.945)PT(0.026)T(0.026)T(0.004)QSPK 121.29 0.00012842 28435000.0 9400.599999999999 8219.099999999999 8206.2 7011.4 11561.1 8200.9 7289.7 7785.1 11858.400000000001 10778.900000000001 10093.5 True False 10987.191457396179 8637.417083385482 9369.962555704611 8729.193314753704 9860.47750489657 9068.71379468316 8614.144130594823 8888.661765868836 9172.491333973581 8343.939003728834 7587.005383571639 1.4481591750530534 1.1384487879879892 1.2350014375887568 1.1505452907223814 1.2996534213943942 1.1952955528830793 1.1353813125330419 1.1715639196876952 1.208973879712151 1.0997671125680502 1.0 12.88931484608933 -14.999999999937529 0.1613811551181843 0.16565685121824653 1.2785319664202794 0.41078731907246224 0.08435933557496107 31.36992497454154 0.32555103040340305 8.30367639128218 0.11554706418919121 1.0000000001438445e-15 14.999999999937529 1.1128751152020329 S(ph)PTTTQSPK ddPTM_A549_PD325901_60min_R1 1 SPTTTQSPK 9 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.968)PT(0.029)T(0.003)T(0.001)QSPK 97.214 0.00086926 20913000.0 9065.8 9025.3 9386.2 8465.4 10275.0 8566.7 8827.9 9893.3 8640.5 10752.0 12003.0 True False 9986.153342110772 9785.8937052931 10023.2039758058 8988.28853168168 9553.319446825662 8496.935635480333 9163.850565312232 9695.970370356292 8277.369833148143 10073.116885052197 10526.70709328604 0.9486493025420993 0.9296253442384245 0.9521689819030515 0.853855669396789 0.9075316109934124 0.8071788794142186 0.8705334426144485 0.9210829449734006 0.78632090356418 0.9569105320197288 1.0 13.361766590543033 -6.243650373542652 23.72867931219952 0.8882259061751168 0.9420956326597087 0.15241396204749436 0.05831796961540168 893.2901867361066 1191549.8982287543 0.010926526572077384 0.028826821042132838 5.706234647989354e-07 6.243650373542652 0.053869726484591984 S(ph)PTVEPSTLPR ddPTM_A549_MK2206_60min_R1 2 SPTVEPSTLPR 11 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.991)PT(0.009)VEPSTLPR;S(0.993)PT(0.006)VEPSTLPR 107.34 0.00014040000000000002 19499200.0 5631.200000000001 6034.5 6340.6 5443.0 8152.799999999999 6361.299999999999 6280.200000000001 6615.9 9474.7 10029.3 9208.0 True False 6581.608890378202 6341.6302745665225 7239.792422887654 6776.535244345555 6953.5339199488535 7034.448543710811 7421.231047774477 7553.724085344001 7328.695577986871 7763.674164348636 6921.39947212836 0.9509072430917398 0.9162352642848461 1.0460012389172773 0.9790700958142705 1.004642767398399 1.016333267865507 1.0722153919389972 1.0913579133471396 1.0588459180110386 1.1216913856239643 1.0 12.756848057692975 -5.736096325724483 0.7963794683930877 1.0351826927921781 0.907157080638791 0.4407104080052504 0.04400388431948911 1.0552512448636253 0.7138923571244201 0.006351139479124466 0.10270066153153999 1.836131047661703e-06 5.736096325724483 -0.12802561215338715 S(ph)PTVPSQNPSR ddPTM_A549_MK2206_60min_R1 2 SPTVPSQNPSR 11 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.999)PT(0.001)VPSQNPSR;S(0.999)PT(0.001)VPSQNPSR 110.93 7.4487e-05 11341500.0 2137.36 3188.3999999999996 2286.5 2600.2 3426.9 2427.4 2524.0 2779.3999999999996 4060.1 3724.8999999999996 3358.1 True False 2498.094114565059 3350.6759412425063 2610.7600818428264 3237.2491167274147 2922.807549586981 2684.2658568222873 2982.5781288148123 3173.388461555515 3140.4938326474175 2883.4425029445956 2524.1910911548916 0.9896612516059977 1.3274256267616702 1.0342957357671074 1.2824897164367528 1.1579184950889398 1.0634162628290385 1.1815975974505937 1.2571902629224463 1.2441585122664185 1.1423233815571927 1.0 11.301605416783655 -10.906992476665971 1.1744480846542824 1.0005526725300076 1.1796383328275017 0.055865381843824946 0.10942955601740872 0.4506828781577826 1.1096793636812983 0.06465210898197152 0.015580722228975214 1.2388180465341856e-11 10.906992476665971 0.17908566029749418 S(ph)PTVPSQNPSR ddPTM_A549_PD325901_60min_R1 1 SPTVPSQNPSR 11 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.996)PT(0.004)VPSQNPSR 103.44 1.2510999999999999e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PVDSGTILR ddPTM_A549_PD325901_60min_R1 1 SPVDSGTILR 10 0 P49454 P49454 CENPF Centromere protein F 1 S(1)PVDSGTILR 55.401 0.019518 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)PVFTPR ddPTM_A549_MK2206_60min_R1 2 SPVFTPR 7 0 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 S(1)PVFTPR;S(1)PVFTPR 78.113 0.016921000000000002 9482500.0 2238.3 2265.3 2329.4 2426.2 3788.8999999999996 2545.2 2325.6000000000004 2891.1000000000004 3825.2 3505.3 3531.2 True False 2616.0703188189973 2380.594094121394 2659.7439469252913 3020.619108916258 3231.557829125478 2814.5313746329743 2748.1314169460084 3300.9222786224177 2958.798307589195 2713.450295463422 2654.305583837932 0.9855950026056725 0.8968801891601452 1.0020488835650552 1.1380072917409394 1.2174776893822759 1.0603644854498508 1.0353485422625721 1.2436104941050252 1.1147165291009895 1.0222825555526172 1.0 11.374118758952998 -6.026606523263054 5.446571373890602 1.0838287704987148 0.9420619751526318 0.40067013460766654 0.07686390267335666 0.15672288387957214 13.888509775446657 0.01187272986885037 0.034130175958494574 9.405750985365287e-07 6.026606523263054 -0.14176679534608305 S(ph)PVFTPR ddPTM_A549_PD325901_60min_R1 2 SPVFTPR 7 0 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 S(1)PVFTPR;S(1)PVFTPR 90.135 0.012568000000000001 14407500.0 2555.7 2896.1 2917.3 2944.2 3001.4 3175.7 2686.3 2668.9 2746.5 3333.5 3347.1 True False 2815.152782593097 3140.164510863834 3115.285521150013 3126.0565472366566 2790.592018267888 3149.8381520999797 2788.528616499763 2615.666695788453 2631.0741562110256 3123.02224110133 2935.4279190150537 0.9590263703486497 1.0697467618000571 1.0612713400216307 1.0649406606058192 0.9506593570876154 1.0730422408589984 0.9499564266035253 0.8910682762280558 0.8963170715817985 1.063906976175801 1.0 11.519355115643211 -7.8252750827068125 8.915961942709687 0.9441522764813043 1.0309732810876726 0.2310490279773706 0.059973187866019594 0.25226375848118254 32.60426629935086 0.008626757834530792 0.011939134868760309 1.495288238504298e-08 7.8252750827068125 0.08682100460636832 S(ph)PVGLSSDGISSSSSSSR ddPTM_A549_MK2206_60min_R1 2 SPVGLSSDGISSSSSSSR 18 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 S(0.999)PVGLSS(0.001)DGISSSSSSSR;S(1)PVGLSSDGISSSSSSSR 92.45700000000001 4.6252e-06 11518900.0 4365.5 4966.1 4809.3 4510.700000000001 7334.9 6267.299999999999 5446.700000000001 5230.700000000001 7569.9 7128.1 7762.2 True False 5102.289673772206 5218.853278071887 5491.33105690212 5615.821702493022 6255.9459264832785 6930.501526102957 6436.29488677323 5972.1677433469185 5855.329736646306 5517.857259319547 5834.631514178408 0.8744836175812337 0.894461503762465 0.9411615872498454 0.9624980924410276 1.0722092579935953 1.1878216317965473 1.103119343720808 1.0235723933609675 1.0035474772344406 0.9457079244697654 1.0 12.510425830148424 -6.258919660351764 1.987159632117872 1.0288270499540684 0.8891986717411212 0.49746188491575205 0.06282499701289515 0.2604473277550044 1.96468893296497 0.009919028790320854 0.03263398823008575 5.509095991274208e-07 6.258919660351764 -0.13962837821294716 S(ph)PVISRPK ddPTM_A549_MK2206_60min_R1 2 SPVISRPK 8 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 S(1)PVISRPK;S(1)PVISRPK 92.611 0.00071963 64695000.0 5791.5 5867.9 5538.8 4878.3 10984.8 8434.8 6569.7 8635.900000000001 12343.8 8350.1 8442.400000000001 True False 6768.9636114194755 6166.551046172654 6324.285126311412 6073.4837189952095 9368.950471476574 9327.364937432907 7763.329450425785 9860.065271334555 9547.949008998097 6463.806610603689 6345.919081613432 1.066664028388223 0.9717349003140496 0.9965908869899236 0.9570692031974418 1.4763740840348918 1.469820969583093 1.2233577753802654 1.5537647336069815 1.5045809576523244 1.018576903908501 1.0 12.631613409872994 -6.743972057325802 24.815080967599815 1.2980644925251301 0.9960358161737679 0.42859259058271904 0.17811151190746405 222.12519256582289 315561.86197282554 0.031334739674826924 0.06510625024958602 1.8031337514473402e-07 6.743972057325802 -0.3020286763513622 S(ph)PVISRPK ddPTM_A549_PD325901_60min_R1 1 SPVISRPK 8 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 S(1)PVISRPK 82.831 0.00096567 48491000.0 4775.3 4199.9 4301.5 3899.7 4924.6 4181.8 4044.2 4793.0 4564.8 5400.2 5033.4 True False 5260.084940609939 4553.840312550329 4593.425657020798 4140.575612138707 4578.713084947706 4147.744807271369 4198.104244071154 4697.3998549642365 4372.957330519606 5059.230450396104 4414.323709351494 1.191594746317935 1.0316054309527136 1.040572907530521 0.937986401714748 1.0372399910880943 0.939610477248102 0.951018665708115 1.0641267302198663 0.990629056327642 1.146094120754763 1.0 12.107976713271965 -4.854884718064344 1.3429039383043637 0.9936275900565781 1.502941694443815 0.40036452882664364 0.06009390071797612 1.340597289977979 1.004985595824821 0.0050767989098662765 1.2124925337330132 1.3967390713030436e-05 4.854884718064344 0.5093141043872369 S(ph)PVLEEAPFSR ddPTM_A549_MK2206_60min_R1 2 SPVLEEAPFSR 11 0 Q9BZL4-3;K7EL81 Q9BZL4-3 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(1)PVLEEAPFSR;S(1)PVLEEAPFSR 144.1 2.4953000000000002e-11 15054300.0 2170.19 2479.3599999999997 1939.41 2172.19 3641.3 3039.7 2213.95 2764.3999999999996 3461.3999999999996 2970.3 2976.77 True False 2536.46501594862 2605.5488337972088 2214.447500689612 2704.376647513314 3105.669593600943 3361.359036410442 2616.1960571670174 3156.262165619939 2677.3984267199726 2299.3071670370573 2237.5558543274906 1.1335873520399642 1.16446203063848 0.989672501987744 1.2086297833785824 1.387974109157766 1.5022458679230228 1.1692204474392123 1.410584750103845 1.1965727789730098 1.0275976631332524 1.0 11.127707980337545 -10.08872058342779 0.9321216442467414 1.018953864439671 1.2423273838060465 0.282648429065405 0.13792150360094507 0.5094173489741138 0.8868901955728643 0.06019343230105563 0.028474779669457783 8.152286174714529e-11 10.08872058342779 0.2233735193663755 S(ph)PVPAQIAITVPK ddPTM_A549_MK2206_60min_R1 2 SPVPAQIAITVPK 13 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK 193.47 3.0983000000000003e-26 54024000.0 9945.1 10941.2 11731.0 9572.1 17009.5 13295.2 12714.7 13308.8 19894.8 16153.199999999999 15671.5 True False 11623.589745649288 11498.060346356322 13394.632197724979 11917.264929707897 14507.425082348398 14702.089239360494 15024.796408257405 15195.36315649062 15388.659565467315 12504.18090111538 11779.83403860334 0.9867362908134335 0.9760799947330645 1.1370815712538762 1.0116666237108423 1.23154749335233 1.2480726970499516 1.275467579510891 1.2899471339489463 1.3063562283677004 1.0614904132043206 1.0 13.524031593304363 -6.163480448305425 1.2484190074101988 1.1794195141825852 0.9804702934395874 0.3671110375129697 0.1020907732596757 0.6294568548202987 1.6990906737017901 0.020187833998498484 0.10418095435810908 6.86308774953035e-07 6.163480448305425 -0.1989492207429978 S(ph)PVPAQIAITVPK ddPTM_A549_PD325901_60min_R1 2 SPVPAQIAITVPK 13 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK 171.91 9.9532e-22 76209000.0 12835.2 14295.2 14974.599999999999 14879.5 17247.4 15705.3 15359.7 16325.8 14745.3 15970.8 16884.1 True False 14138.220055225154 15499.906673008762 15990.866405584948 15798.57292120366 16036.002124299852 15577.401243875625 15944.221788650339 16000.169111657668 14125.606319162001 14962.400962406222 14807.462737128286 0.954803689613544 1.0467631726091897 1.0799194088457431 1.06693315402309 1.0829675825616716 1.0519966533372926 1.0767693339299609 1.08054765328153 0.953951839685769 1.0104635228889987 1.0 13.854036835155407 -8.760853624858077 24.999881977694802 0.9782550336297657 1.0575817107977432 0.38713191621184406 0.036852165500171 9.569285885717866 408415.16720018483 0.006339369530899249 0.006979245703266227 1.7343884596567372e-09 8.760853624858077 0.07932667716797748 S(ph)PVPSAFSDQSR ddPTM_A549_MK2206_60min_R1 2 SPVPSAFSDQSR 12 0 Q9UQ35;Q9UQ35-2;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PVPSAFSDQSR;S(1)PVPSAFSDQSR 135.13 3.8874e-08 115021000.0 38973.0 38924.0 35938.0 32604.0 58536.0 50217.0 41900.0 52830.0 64261.0 56003.0 49891.0 True False 45550.68960163196 40905.06534215381 41034.54879565603 40591.98146364916 49925.43194217034 55530.92960865323 49512.68763761516 60318.81428508956 49705.986103730356 43351.88340422728 37501.687778448766 1.2146303886570338 1.0907526504889968 1.0942053871836006 1.082404122807942 1.3312849340839847 1.4807581444525115 1.3202789146484442 1.6084293230064488 1.3254333084255232 1.1559981956102912 1.0 15.194667905686085 -4.724058510806544 14.70504817078762 1.2137106491290188 11.620472951256335 0.0 0.18101336123559567 38601.14906926643 2065785.6277469564 0.028697869951376236 57215.79448000613 1.887737004498179e-05 4.724058510806544 10.406762302127316 S(ph)PVPTTLPGLR ddPTM_A549_MK2206_60min_R1 2 SPVPTTLPGLR 11 0 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5 F8VV64 TNS2 Tensin-2 1 S(0.996)PVPT(0.003)T(0.001)LPGLR;S(0.998)PVPT(0.001)T(0.001)LPGLR 84.507 0.0005122999999999999 11522400.0 2051.63 2334.55 1989.3 1954.29 3274.1000000000004 2385.3 2256.6000000000004 2233.8900000000003 3242.3 2371.8999999999996 3106.1 True False 2397.8949864623223 2453.368623330728 2271.4126528799165 2433.0911377314133 2792.484227174043 2637.710862766007 2666.595010096475 2550.550748501206 2507.9242268891708 1836.0861426439062 2334.769646001076 1.0270370743295234 1.0507968644927284 0.972863707034364 1.0421118596854895 1.1960427153731963 1.129752079518337 1.142123384490517 1.0924207246182565 1.0741634538485065 0.786409976585356 1.0 11.189064501849433 -3.8034966716324234 11.402927199047818 1.0576539729191836 0.6328095463630043 0.0 0.10369474411024181 0.0 0.0 0.009422017769312657 0.0 0.00015721838413972183 3.8034966716324234 -0.42484442655617927 S(ph)PVPTTLPGLR ddPTM_A549_PD325901_60min_R1 2 SPVPTTLPGLR 11 0 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4;Q63HR2-5 F8VV64 TNS2 Tensin-2 1 S(0.999)PVPTTLPGLR;S(1)PVPTTLPGLR 81.525 0.00077777 9825300.0 2076.27 2371.7 2489.9 2089.76 2380.8999999999996 2038.32 2288.1000000000004 2228.6000000000004 2383.2 3430.8 3423.7 True False 2287.051401930812 2571.5714824818747 2658.8795869850246 2218.839729010689 2213.673797659098 2021.7205977228414 2375.174897596364 2184.1488246971226 2283.0423918012443 3214.1787024960086 3002.6066046224632 0.7616886602493761 0.8564463551512153 0.8855237921916655 0.7389711744438389 0.737250692198966 0.6733218379691951 0.7910376583931513 0.7274175782250867 0.7603534836320344 1.070462809729331 1.0 11.551999752984306 -10.606194768416534 0.8249007939734685 1.0044632539129812 0.7706355198777137 0.7225198544176226 0.06192581814243417 0.3151631998118117 0.3720976133155616 0.045759163243616015 0.011622747104982968 2.4763112551509872e-11 10.606194768416534 -0.23382773403526746 S(ph)PVQLEEAPFSR ddPTM_A549_MK2206_60min_R1 2 SPVQLEEAPFSR 12 0 Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(1)PVQLEEAPFSR;S(1)PVQLEEAPFSR 145.43 7.6011e-12 8978900.0 1845.06 1914.5 1489.26 1389.19 2752.6 1809.38 1489.1100000000001 1834.1599999999999 2982.4 2206.35 2755.3 True False 2156.4610206139373 2011.9398725093395 1700.4594618347905 1729.5416123631087 2347.696186347171 2000.8473906307613 1759.6620116479487 2094.15779687942 2306.891161914154 1707.9340026233754 2071.082967588539 1.0412238690393019 0.9714433965201971 0.8210484507121011 0.8350904524008022 1.1335596994845196 0.966087511675326 0.8496337612668446 1.0111414316335903 1.1138574349825192 0.8246574518509052 1.0 11.016169633744886 -8.514945613023484 23.983665811934294 1.0542256706473097 0.9443666430632264 0.0 0.11349857852372171 253.30826973162468 765810.0150387316 0.015965366933214323 0.018516155075932694 3.0553037069016124e-09 8.514945613023484 -0.10985902758408328 S(ph)PVQLEEAPFSR ddPTM_A549_PD325901_60min_R1 1 SPVQLEEAPFSR 12 0 Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(1)PVQLEEAPFSR 104.95 0.00017041 2947900.0 2062.9 1578.4 1716.7 2065.2 2391.3 2262.1 1842.4 1801.2 1811.4 2453.6 2183.1 True False 2272.324089373286 1711.4173073952825 1833.2055853557142 2192.7627135904963 2223.343337537151 2243.678207596865 1912.5135401999646 1765.2736529859346 1735.273157313182 2298.679277266005 1914.5925398111108 1.1868447422225243 0.8938806935726005 0.9574912401656877 1.1452894900587198 1.1612618827797694 1.171882873740969 0.9989141294725031 0.922010096811561 0.9063407076078861 1.2006101713384862 1.0 10.902821677678611 -7.9902849666255245 23.889282985300714 0.952406834663576 1.0782780744571332 0.03500972675854641 0.11577145626278333 121.39408615339049 298505.53233650397 0.014812083113531374 0.020449790404747467 1.0226217686883301e-08 7.9902849666255245 0.1258712397935572 S(ph)PVREPIDNLTPEER ddPTM_A549_MK2206_60min_R1 4 SPVREPIDNLTPEER 15 1 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 S(0.998)PVREPIDNLT(0.002)PEER;S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER 108.71 9.9535e-07 39140800.0 1197.21 1674.9 1699.96 1668.51 1955.43 1437.92 1532.56 1764.08 2696.38 2204.79 2477.6 True False 1399.2697790257305 1760.1452559236832 1941.0398901069452 2077.29502490226 1667.7888373424576 1590.0797399859537 1811.0063142220388 2014.1437422684219 2085.6542352340684 1706.7264077068435 1862.343541718639 0.7513489040450791 0.9451238273145655 1.0422566227043601 1.115419888097153 0.8955323225721076 0.8538058120676112 0.9724340722607901 1.0815103106109498 1.119908431775885 0.9164401569711534 1.0 10.862903512348046 -8.148551589183038 4.911589659925236 1.0599048131435154 0.9436689466305561 0.13158173038146537 0.10226569423796138 0.26427284412012936 9.777241741035356 0.016193077509024923 0.021037307668643944 7.103107882496857e-09 8.148551589183038 -0.11623586651295925 S(ph)PVREPIDNLTPEER ddPTM_A549_PD325901_60min_R1 4 SPVREPIDNLTPEER 15 1 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 S(0.998)PVREPIDNLT(0.002)PEER;S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER 165.69 8.1816e-21 49217700.0 3761.56 4396.25 3384.5 3752.3100000000004 4728.98 4542.98 3161.7 5070.219999999999 3739.76 4725.73 4877.37 True False 4143.430802085883 4766.737416140719 3614.192522651841 3984.081666585688 4396.8327588953425 4505.983477100218 3282.0202236486234 4969.090484589355 3582.590892565718 4427.346601301872 4277.48441019583 0.9686606436740213 1.114378676583532 0.8449341192306947 0.9314076416244123 1.0279015274526855 1.0534190297362012 0.7672781263271437 1.1616852355428835 0.8375462185265339 1.0350351226877252 1.0 12.062546881311516 S(ph)PVREPVDNLSPEER ddPTM_A549_MK2206_60min_R1 1 SPVREPVDNLSPEER 15 1 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 S(1)PVREPVDNLSPEER 75.23899999999999 0.00019053 2060300.0 215.5 337.72 358.98 123.83 385.28 311.25 231.64 330.77 473.13 395.1 429.02 True False 251.87113153084653 354.9085054812505 409.88876194180517 154.16835555893994 328.60582237733 344.1862684089713 273.72598960327383 377.65766044064077 365.96681043335667 305.8466355911328 322.4824936503593 0.7810381539778382 1.100551231367145 1.2710419015371828 0.47806736363832436 1.0189880965557458 1.067302179764659 0.848808834565922 1.1710950760945904 1.1348424104849046 0.9484131436999387 1.0 8.333077034002606 -8.261726975962238 24.999995377643494 1.073511214333439 0.9474363114524871 0.08174659949821284 0.1999347034683842 52.02892440100769 4522702.185654283 0.03117177631211764 0.03887936326950047 5.473599586566863e-09 8.261726975962238 -0.12607490288095202 S(ph)PVREPVDNLSPEER ddPTM_A549_PD325901_60min_R1 2 SPVREPVDNLSPEER 15 1 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 S(0.979)PVREPVDNLS(0.021)PEER;S(1)PVREPVDNLSPEER 67.43 0.00083415 6659600.0 610.54 797.4 821.71 833.76 655.9300000000001 881.63 887.37 582.93 789.27 932.6 892.94 True False 672.5215713442069 864.5996964755434 877.476181943639 885.2594615936536 609.8597396356558 874.4502975834953 921.1393509374959 571.3030038502617 756.0997266603591 873.7154768414882 783.1140408130332 0.858778589445276 1.1040533707937497 1.1204960404395745 1.130434924490145 0.7787623613573526 1.1166321276472535 1.1762518649022868 0.7295272132487012 0.9655039844201648 1.1156937959309121 1.0 9.613078604743531 S(ph)PVSTRPLPSASQK ddPTM_A549_MK2206_60min_R1 10 SPVSTRPLPSASQK 14 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(1)PVSTRPLPSASQK;S(1)PVSTRPLPSASQK;S(0.99)PVS(0.007)T(0.002)RPLPSASQK;S(0.998)PVS(0.001)TRPLPSASQK;S(0.999)PVS(0.001)TRPLPSASQK;S(0.991)PVS(0.007)T(0.002)RPLPSASQK;S(0.999)PVS(0.001)TRPLPSASQK;S(0.985)PVS(0.007)T(0.007)RPLPSASQK;S(0.999)PVSTRPLPSASQK;S(1)PVSTRPLPSASQK 158.81 3.7431e-19 6131022000.0 60857.09999999999 65221.5 65073.1 57084.8 83617.9 60912.8 61291.700000000004 62219.50000000001 94048.79999999999 89497.99999999999 90793.39999999998 True False 71128.29066675591 68540.99576644963 74301.4440768714 71070.57856263396 71317.81767796245 67358.55206535578 72427.60851738465 71039.3046642273 72746.89696507233 69280.33964093961 68246.8930096372 1.0422202027088885 1.0043093940814405 1.0887154095993676 1.0413745656171927 1.0449972816768611 0.9869834229060657 1.0612586935958694 1.0409163191384518 1.0659371255889947 1.0151427645381081 1.0 16.058475747316443 -11.013652161779003 1.3089059525385058 1.0000860145667443 1.0438340866157592 0.18983269538714087 0.026621273244196407 0.47617940879021853 1.457504551276947 0.018303725278539622 0.00418269889727345 9.690536868894373e-12 11.013652161779003 0.043748072049014874 S(ph)PVSTRPLPSASQK ddPTM_A549_PD325901_60min_R1 9 SPVSTRPLPSASQK 14 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(1)PVSTRPLPSASQK;S(0.994)PVS(0.005)T(0.002)RPLPSASQK;S(1)PVSTRPLPSASQK;S(1)PVSTRPLPSASQK;S(0.997)PVS(0.003)T(0.001)RPLPSASQK;S(0.995)PVS(0.002)T(0.002)RPLPSASQK;S(1)PVSTRPLPSASQK;S(0.992)PVS(0.004)T(0.004)RPLPSASQK;S(1)PVSTRPLPSASQK 204.67 7.182599999999999e-32 10693356200.0 63546.09999999999 60528.6 64973.49999999999 66158.09999999999 78363.0 74795.7 72104.5 74163.3 73432.79999999999 76243.2 81847.4 True False 69997.25329183365 65629.55754714008 69382.99242739538 70244.53558105337 72859.05321767386 74186.5886176352 74848.47620459652 72684.05480151677 70346.67478544067 71429.19134025412 71780.68867341672 0.9751543846326519 0.9143066019572107 0.9665969177736615 0.9785993542169475 1.01502304539266 1.033517370600395 1.0427383407414412 1.012585085832906 0.9800222885224683 0.9951031769176552 1.0 16.13130814417679 -6.284704563248119 2.393613454572784 1.0005841124347035 0.9451136386659157 0.536230338691941 0.023060853115189937 0.2137818200359328 2.3771566502293977 0.003734552271576009 0.01105507304065733 5.191530821975989e-07 6.284704563248119 -0.055470473768787776 S(ph)PVVELSK ddPTM_A549_MK2206_60min_R1 2 SPVVELSK 8 0 P25098 P25098 ADRBK1 Beta-adrenergic receptor kinase 1 1 S(1)PVVELSK;S(1)PVVELSK 81.548 0.0037018999999999997 6423000.0 3434.3999999999996 4411.7 3488.2 3084.8 4701.0 4166.4 3523.2 4270.4 5618.9 4917.799999999999 5283.1 True False 4014.0427569816206 4636.236686105747 3982.8792116703007 3840.5761384819343 4009.489127377043 4607.285682567512 4163.3198349605145 4875.742277551509 4346.228121539511 3806.865564439563 3971.160463857663 1.0107984286996805 1.1674765420085835 1.002950963054576 0.9671168348486032 1.009651753906249 1.160186228811289 1.048388719834349 1.227787776879486 1.0944478726295286 0.9586279877347236 1.0 11.95534494210832 -5.796276087298004 24.99988294438208 1.0560240191943198 1.0891385164756604 0.025741170744023933 0.08509758610805887 597.92265152764 429086.3255204669 0.011486425631375538 0.035714826534808015 1.5985414895360358e-06 5.796276087298004 0.03311449728134064 S(ph)PVVELSK ddPTM_A549_PD325901_60min_R1 2 SPVVELSK 8 0 P25098 P25098 ADRBK1 Beta-adrenergic receptor kinase 1 1 S(1)PVVELSK;S(1)PVVELSK 91.65799999999999 0.0033404000000000003 4189400.0 3172.8 2884.7 2792.5 2502.3 3557.3 3030.5 2783.8 3083.5 3961.0 3360.4 3453.2 True False 3494.9003203080883 3127.8037928555286 2982.015842666649 2656.8613878643723 3307.4475200187803 3005.8206127590715 2889.73903235381 3021.9971735410463 3794.5329447485415 3148.223770510547 3028.478291638372 1.154012009911878 1.0327971646656324 0.9846581535353891 0.8772925317642085 1.0921153138692268 0.9925184608580956 0.9541884583859753 0.9978599423627305 1.2529503530618813 1.0395398174729509 1.0 11.564377354742438 S(ph)PYGGGRPGR ddPTM_A549_PD325901_60min_R1 1 SPYGGGRPGR 10 1 P46781 P46781 RPS9 40S ribosomal protein S9 1 S(0.999)PY(0.001)GGGRPGR 59.198 0.0026978 27468000.0 8066.6 8002.0 6985.0 7204.8 6935.8 12221.0 7438.5 8320.8 10738.0 9830.6 13511.0 True False 8885.515293682944 8676.356623021442 7459.0441042172 7649.824132711993 6448.653335211042 12121.476227859628 7721.576188003384 8154.835116458679 10286.71920240087 9209.894238299306 11849.232653285648 0.7498810727814597 0.7322294090170973 0.6294959616772229 0.6455965847367163 0.5442253961840229 1.0229756291010532 0.6516520026182696 0.6882163052303174 0.8681337858235476 0.7772565960839257 1.0 13.532506013935059 -9.166124698958274 0.5334857184114247 0.9963504746328836 0.6837008897896673 0.17270163642481628 0.13236581482905269 0.4505889228117636 0.2982367533000012 0.05086609861381575 0.035975382222881 6.821428023825958e-10 9.166124698958274 -0.31264958484321637 S(ph)PYGSR ddPTM_A549_MK2206_60min_R1 1 SPYGSR 6 0 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.999)PY(0.001)GSR 73.208 0.047201 4360700.0 504.51 490.84 415.64 413.26 968.18 678.59 518.44 770.56 1012.1 697.49 873.61 True False 589.6589539147445 515.8216594528512 474.58400193184013 514.5087185519466 825.7620045402905 750.3979433884144 612.6338372039424 879.78923974103 782.8609659915891 539.9265245721571 656.6685265905797 0.8979552544968942 0.7855129925763233 0.7227147072144272 0.783513595852193 1.257502028957659 1.1427347482061878 0.9329422873131057 1.3397767733880777 1.1921706832154724 0.8222208050315025 1.0 9.359021499865028 -6.7456969476981605 24.943899665747793 1.1133344888924306 0.7912368299163174 0.5033681720185679 0.14316224371895012 122.9172528360534 194761.36188870438 0.017582204066984162 0.03650264175315348 1.7959864356769773e-07 6.7456969476981605 -0.3220976589761132 S(ph)PYKFPS(ph)SPLR ddPTM_A549_PD325901_60min_R1 3 SPYKFPSSPLR 11 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 S(0.995)PY(0.005)KFPS(0.533)S(0.467)PLR;S(0.987)PY(0.013)KFPS(0.55)S(0.45)PLR;S(0.816)PY(0.184)KFPS(0.564)S(0.436)PLR 60.549 0.0024031999999999994 67902900.0 4473.8 4378.299999999999 4979.299999999999 4689.5 5774.4 5211.3 4725.41 4661.1 5617.0 5256.0 5642.9 True False 4927.9768825625115 4747.274706645187 5317.225240963307 4979.159764372769 5368.826064598553 5168.860900601006 4905.238063393568 4568.13070393779 5380.93702364367 4924.135263005429 4948.859073290328 0.9957804030346065 0.959266496851139 1.0744345640515613 1.00612276297096 1.0848613761452301 1.044455060055773 0.9911856431450659 0.9230674457053382 1.0873085985990845 0.9950041393543946 1.0 12.272880244393777 -5.746210525041144 24.98293533482311 1.033227128939597 0.9775234381070925 0.08742046374604273 0.047943136904600454 342.85021971542903 562435.5110000116 0.006908967324807562 0.026551011784967056 1.7938638372709873e-06 5.746210525041144 -0.05570369083250437 S(ph)PYKFPSSPLR ddPTM_A549_PD325901_60min_R1 1 SPYKFPSSPLR 11 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 S(0.444)PY(0.027)KFPS(0.444)S(0.086)PLR 43.03 0.019968 18937000.0 3897.9 3791.8 4547.3 4050.1 4743.0 4756.1 3819.4 4086.3 4482.5 3955.0 4713.5 True False 4293.611938517683 4111.34829332326 4855.907123136274 4300.265478555529 4409.868042461715 4717.367898479932 3964.749357055875 4004.7955408596667 4294.116113313645 3705.280625035475 4133.76938133831 1.0386675071669391 0.9945761154175002 1.1746923147328967 1.0402770647943875 1.0667910170242776 1.1411782959582233 0.959112372101485 0.9687999429622539 1.0387894720734088 0.8963443006188914 1.0 12.013242189226071 -7.769825573407009 24.999865375956276 1.0102442631290263 1.0747674323784242 0.3466840944749695 0.061502062158301514 187.73895862376477 559663.6085502332 0.0079144234596993 0.011030838895271228 1.6989258585688307e-08 7.769825573407009 0.06452316924939794 S(ph)PYQEFTDHLVK ddPTM_A549_MK2206_60min_R1 4 SPYQEFTDHLVK 12 0 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 1 S(0.999)PY(0.001)QEFTDHLVK;S(0.999)PY(0.001)QEFTDHLVK;S(0.97)PY(0.03)QEFTDHLVK;S(0.998)PY(0.001)QEFTDHLVK 119.56 5.2515e-06 13412200.0 2241.92 2238.76 1905.06 1337.581 3306.05 2662.59 2239.12 2577.03 3651.4300000000003 2961.56 4433.4 True False 2620.3012863184927 2352.703321482898 2175.226154172531 1665.288405046293 2819.7344244979545 2944.3435065158023 2645.9391203612595 2942.331894323382 2824.3869351355274 2292.541539107251 3332.4644243846537 0.786295351615745 0.7059950300646733 0.6527379972178371 0.4997167840295225 0.8461408931675615 0.8835333649689242 0.7939887072762487 0.8829297239584755 0.8475370102884313 0.6879417893652604 1.0 11.702373758614657 -8.34312820819433 0.28319235537943344 1.0109218765436923 0.6391855866000199 0.06557085123717998 0.12623433882545776 0.8965900373835713 0.22473948419166123 0.09081997378937792 0.11780036107545103 4.5380762819813876e-09 8.34312820819433 -0.37173628994367236 S(ph)PYQEFTDHLVK ddPTM_A549_PD325901_60min_R1 2 SPYQEFTDHLVK 12 0 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 1 S(0.919)PY(0.081)QEFTDHLVK;S(0.955)PY(0.045)QEFTDHLVK 96.303 7.8945e-05 20154900.0 1904.8000000000002 1580.1100000000001 1342.37 1908.08 1642.06 1685.76 1643.74 1911.49 1928.5900000000001 1999.57 2023.9299999999998 True False 2098.173893760354 1713.2714150965269 1433.4713005265635 2025.9377680359082 1526.7273703994708 1672.031729471946 1706.2934251890404 1873.3638324151034 1847.5380691523844 1873.3168089512487 1774.9994407493473 1.1820701717373912 0.9652236365625215 0.807589719533319 1.1413737500562946 0.8601283670010262 0.9419900035382931 0.9612923734041846 1.0554165761450776 1.0408668457790688 1.0553900840444181 1.0 10.793602854728269 -8.244606396884446 23.613368821758385 1.0225463250255586 0.9728965193438889 0.058734271096759105 0.10283838927599637 1003.2615878671828 1407379.0118801624 0.015413141968238713 0.019862928427055376 5.693687186046997e-09 8.244606396884446 -0.04964980568166977 S(ph)PYSGPK ddPTM_A549_MK2206_60min_R1 2 SPYSGPK 7 0 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23 G3XAC6 RBM39 RNA-binding protein 39 1 S(1)PYSGPK;S(1)PYSGPK 69.954 0.02163 28489000.0 5145.5 5235.1 5129.200000000001 4897.6 6808.3 5530.6 5407.3 5435.8 7831.9 7449.0 7714.400000000001 True False 6013.934604603113 5501.544229079993 5856.597687202372 6097.512219861615 5806.808088900473 6115.84442108484 6389.736416775095 6206.34129643933 6057.987154974333 5766.265726444816 5798.701573391294 1.0371174526724167 0.9487545029606494 1.009984323745293 1.051530612963682 1.0013979880507005 1.0546920450517459 1.1019253768974597 1.0702984483489522 1.0447144206856294 0.9944063603660314 1.0 12.501514177430243 -6.00232744889937 24.949013522599827 1.0333486523641506 0.9895443355297342 0.19572865430094855 0.03638162741822202 118.75924141022345 1273103.3860122673 0.005238860790477542 0.015910048704701134 9.946551854808027e-07 6.00232744889937 -0.043804316834416435 S(ph)PYSGPK ddPTM_A549_PD325901_60min_R1 2 SPYSGPK 7 0 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23 G3XAC6 RBM39 RNA-binding protein 39 1 S(0.995)PY(0.005)SGPK;S(1)PYSGPK 81.635 0.015326 24883000.0 9774.5 9113.5 9599.0 10537.6 11649.5 10562.8 11013.9 11184.6 11942.6 11698.7 13224.900000000001 True False 10766.800044393407 9881.526628831027 10250.445863476152 11188.483619374025 10831.27930859325 10476.78005888518 11433.039991537335 10961.514378851038 11440.694053510208 10960.042085487365 11598.321139548329 0.9283067708550012 0.8519790502382866 0.8837870360843736 0.9646640651484613 0.933866132716433 0.9033014289594999 0.9857495627149507 0.9450949190804964 0.9864094911546604 0.9449679788668258 1.0 13.501628369476592 -7.314648987464288 0.3797122732559422 1.0016008458129353 0.8729774523680577 0.40861585853309745 0.03353800839130431 0.7156150932723679 0.1884318480713255 0.010476895492104978 0.03492566029224654 4.845638514186016e-08 7.314648987464288 -0.1286233934448776 S(ph)QAEPSER ddPTM_A549_MK2206_60min_R1 1 SQAEPSER 8 0 O43290;E9PQI8 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 S(1)QAEPSER 44.318000000000005 0.060662 841860.0 201.24 159.92 0.0 0.0 128.09 0.0 86.564 0.0 99.396 150.0 174.97 True False 235.20439215437378 168.0592449264526 0.0 0.0 109.24813067979697 0.0 102.29155829743476 0.0 76.88296470279613 116.11489582047557 131.52012007366412 1.7883529305070307 1.2778215594110087 0.0 0.0 0.8306571695540375 0.0 0.7777635713846786 0.0 0.5845718864895665 0.8828679273972673 1.0 7.039139711042 -5.556138499553182 6.75924782734077 0.5992341997595819 1.6690571995452146 0.5072929525263208 0.40211462097331285 0.10632934369488911 14.989175322945574 0.0599927300202254 0.2440519752321162 2.778826939057749e-06 5.556138499553182 1.0698229997856328 S(ph)QDLGVQFPGDR ddPTM_A549_MK2206_60min_R1 2 SQDLGVQFPGDR 12 0 I3L2J0 I3L2J0 CIC 1 S(1)QDLGVQFPGDR;S(1)QDLGVQFPGDR 151.9 1.9413e-12 5724700.0 1966.83 2073.91 1827.15 1817.7199999999998 2110.8199999999997 2064.7799999999997 1504.23 1450.3600000000001 2676.8999999999996 2578.8 2506.1 True False 2298.7828196232704 2179.463160614177 2086.2673446486424 2263.0614816005514 1800.321174186345 2283.273649109963 1777.529119931499 1655.9529715412164 2070.5864241309014 1996.2472889456155 1883.7662051586533 1.2203121668326478 1.1569711541940628 1.1074980212169876 1.201349443154467 0.9557030852640864 1.212079101354121 0.9436038904741861 0.8790650172014046 1.099173782001527 1.0597107451439225 1.0 10.879404207368513 -6.7495482977331696 24.99642532232246 1.034446716658583 1.1659186969753974 0.4007755379910597 0.0873192722006896 203.21332343692725 427175.0803160797 0.01252025495982146 0.0259003672009053 1.7801299302359222e-07 6.7495482977331696 0.1314719803168145 S(ph)QEADVQDWEFR ddPTM_A549_MK2206_60min_R1 3 SQEADVQDWEFR 12 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR 231.37 1.3063e-40 55262080.0 10802.05 12984.95 9029.75 7867.6 20409.370000000003 17230.74 14319.3 15623.53 23071.35 16991.58 17425.88 True False 12625.171955233325 13645.828491794276 10310.30432933315 9795.162353189984 17407.178709128955 19054.08546996047 16920.931457978575 17838.21322255394 17845.7260623753 13153.170276835188 13098.553066178567 0.9638600455673576 1.0417813649225742 0.7871330731907419 0.7478049143062846 1.328939053129126 1.454671013942718 1.2918168420960687 1.361846085779774 1.3624196483544648 1.004169713279068 1.0 13.677119832568543 -6.765777722483687 24.997004287575674 1.2296866720915782 0.8893323211762548 0.5700243145342638 0.1544188897932896 79.31391779679026 457000.94886321825 0.02683675147694458 0.05199761930162638 1.7148347574868173e-07 6.765777722483687 -0.3403543509153234 S(ph)QEADVQDWEFR ddPTM_A549_PD325901_60min_R1 3 SQEADVQDWEFR 12 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR 130.12 7.478e-08 42227180.0 7835.93 8624.009999999998 9411.78 9066.11 9426.62 9831.74 8509.21 8090.45 11253.92 10117.76 10308.09 True False 8631.42784509322 9350.785588665727 10050.519988430828 9626.10302407028 8764.526731273554 9751.673569143013 8833.032642968376 7929.0796279147535 10780.956878961008 9478.922906892274 9040.260278366315 0.9547764753796473 1.0343491559687181 1.1117511751826552 1.064803747642743 0.9694993795972222 1.0786938947409663 0.9770772489931686 0.8770853253959227 1.1925493898400519 1.0485232299755456 1.0 13.142148594570552 -8.779240238896085 24.99338993559186 1.0909260736274615 1.0146760842839477 0.14472335988426477 0.07555152278500202 373.0702258251695 523809.09799778694 0.01579843577767321 0.01683659778208206 1.6624927540144113e-09 8.779240238896085 -0.07624998934351379 S(ph)QEDLNEPIKR ddPTM_A549_MK2206_60min_R1 2 SQEDLNEPIKR 11 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(1)QEDLNEPIKR;S(1)QEDLNEPIKR 145.69 8.7889e-12 34703000.0 6397.8 6252.6 5089.2 5090.799999999999 8746.1 8434.1 7647.3 9004.3 11267.2 8980.0 8187.3 True False 7477.592228807658 6570.830632986103 5810.925085726881 6338.046228534693 7459.560275888611 9326.59086389753 9036.715421745446 10280.687099512243 8715.197190021174 6951.411763119141 6154.167452015264 1.2150452985089024 1.0677042320053216 0.9442260274903661 1.029878741186871 1.2121152591397035 1.5154918901082899 1.468389590014528 1.6705244339988987 1.4161456050675494 1.1295454368637319 1.0 12.587347983924268 -6.888985429633336 4.85055444999594 1.2859290198859785 1.0571371357289463 0.3128084207855245 0.1898387593104802 0.31259231910067226 12.082897707161484 0.03571650257742722 0.06887708616177485 1.2912625941129654e-07 6.888985429633336 -0.22879188415703222 S(ph)QEDQLSR ddPTM_A549_PD325901_60min_R1 1 SQEDQLSR 8 0 F5H875;F8VVT7;Q9HD42-2;Q9HD42 F5H875 CHMP1A Charged multivesicular body protein 1a 1 S(1)QEDQLSR 70.942 0.0063597 2077600.0 299.01 251.14 407.05 382.46 301.78 408.95 230.2 374.22 379.13 344.53 239.06 True False 329.36527508047214 272.3044491759066 434.6748607904955 406.0836855703186 280.5840138844817 405.61964678694034 238.9603869702735 366.75588853008907 363.1964845600896 322.77631700214215 209.6571355261985 1.5709709772282712 1.2988084020726296 2.0732652847686124 1.9368941798767203 1.3382993771248022 1.9346808577199825 1.1397674892892606 1.7493126938398895 1.732335432555335 1.5395436754014433 1.0 7.7118881218578 -10.786583958580872 0.7888004677976717 0.9509089664176972 1.6483217244419346 0.08000512242365188 0.3190857798393366 0.5839743664521331 0.5695211259332837 0.2626389207070854 0.05029052728947185 1.6346171134976567e-11 10.786583958580872 0.6974127580242374 S(ph)QEELREDK ddPTM_A549_MK2206_60min_R1 2 SQEELREDK 9 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(1)QEELREDK;S(1)QEELREDK 98.902 0.00022901 50074000.0 4507.0 4393.2 3943.1000000000004 3939.6000000000004 6856.4 5502.1 5214.8 5279.4 7630.299999999999 5820.200000000001 5882.6 True False 5267.671414429349 4616.7951151256375 4502.290871950337 4904.802176855363 5847.8326426181575 6084.328570001611 6162.261658535448 6027.771117484416 5902.049233085286 4505.412777695548 4421.788068499382 1.191298934464092 1.0441014005206348 1.0182059389106533 1.1092350200582772 1.322504053117754 1.3759882825108904 1.3936130730541163 1.363197653100108 1.3347652898905802 1.0189119668108713 1.0 12.110414164666514 -6.5841992797239 9.08397903127939 1.221543190007123 1.0777048471806376 0.2339785812107058 0.13626792184847333 0.5019775746892142 69.31144341998807 0.024471238001618104 0.051024417083482015 2.604957968556256e-07 6.5841992797239 -0.14383834282648533 S(ph)QEELREDK ddPTM_A549_PD325901_60min_R1 2 SQEELREDK 9 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(1)QEELREDK;S(1)QEELREDK 103.13 0.00018501 57586000.0 9234.1 9059.599999999999 9239.9 9468.3 9265.3 8833.5 8814.900000000001 8809.7 9337.8 9671.4 9636.7 True False 10171.539034214871 9823.084286668964 9866.97517803242 10053.135386930522 8614.537291549765 8761.56290473759 9150.355843198367 8633.983622424048 8945.364739074204 9060.746153468544 8451.446992074447 1.2035263362301725 1.162296148325938 1.1674894473438004 1.1895164693523013 1.0192973226511697 1.0366938244958481 1.082696945479199 1.0215982695650554 1.0584417967080597 1.072094064124816 1.0 13.044982654408516 -6.761006391910239 24.99999964662675 1.032188465659014 1.178447934177233 0.8695537939230102 0.025761043628839627 2.951104121617502 170370.82207568243 0.00396965057222438 0.007882142362307762 1.7337784799581855e-07 6.761006391910239 0.14625946851821903 S(ph)QEEPKDTFEHDPSESIDEFNK ddPTM_A549_MK2206_60min_R1 2 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.946)QEEPKDT(0.054)FEHDPSESIDEFNK;S(0.998)QEEPKDT(0.002)FEHDPSESIDEFNK 159.65 4.2344e-33 13260700.0 1833.4099999999999 2226.8 1825.9 1677.76 3755.0 2289.69 1578.19 2620.2 3943.7 2492.0 3232.3 True False 2142.8447854290916 2340.1346085681894 2084.8400758525318 2088.8112753175083 3202.644474218421 2531.9834760267863 1864.9266945777529 2991.6213740259604 3050.458246794811 1929.0554692308351 2429.630703058266 0.88196316532048 0.9631647334809258 0.8580892862558357 0.8597237731183772 1.31816101524694 1.0421268848964105 0.7675761967571041 1.2313070337233951 1.2555234188286666 0.7939706502731718 1.0 11.246521329622714 -6.722710665673122 24.998694797200294 1.1099605961157328 0.8935767130434293 0.1416677449769389 0.17067067712110306 158.50006328174385 102308.23615366087 0.022308355148371456 0.04643790789127459 1.89360475000626e-07 6.722710665673122 -0.2163838830723035 S(ph)QEGLRPR ddPTM_A549_MK2206_60min_R1 6 SQEGLRPR 8 1 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 S(1)QEGLRPR;S(1)QEGLRPR;S(1)QEGLRPR;S(1)QEGLRPR;S(1)QEGLRPR;S(1)QEGLRPR 111.86 0.00041381 1056967700.0 10059.99 10437.830000000002 7928.42 8160.99 11518.43 9650.42 8926.1 11589.720000000001 12587.58 12497.349999999999 12113.640000000001 True False 11757.870368858466 10969.07096342343 9052.78917475806 10160.432916360758 9824.084205371953 10671.621038969657 10547.856828690135 13232.598302028913 9736.513228234764 9674.189955213475 9105.488868543987 1.2912947935697832 1.2046657924449737 0.9942123158298524 1.1158580349772544 1.0789189188194432 1.1719986914525877 1.1584064272626793 1.4532551182114477 1.0693015354585438 1.0624569526007697 1.0 13.152520761423833 -8.982174054176415 24.832759174721815 1.0305740067189006 1.1766389507547763 0.23646999837164184 0.11252321812993892 107.43010863140019 149659.95908565927 0.02045444247246707 0.020734408504370097 1.0418997787899683e-09 8.982174054176415 0.14606494403587567 S(ph)QEGLRPR ddPTM_A549_PD325901_60min_R1 5 SQEGLRPR 8 1 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 S(1)QEGLRPR;S(1)QEGLRPR;S(1)QEGLRPR;S(1)QEGLRPR;S(1)QEGLRPR 61.48 0.0030151 1296978700.0 10868.48 11695.87 10397.630000000001 10705.439999999999 12710.88 9542.42 9897.449999999999 10187.92 11546.720000000001 13029.77 11744.32 True False 11971.840088647903 12681.522011559335 11103.275697828474 11366.69071498172 11818.111638955472 9464.709695299267 10274.102875842447 9984.71394333137 11061.451513200433 12207.068098525539 10299.843093378413 1.1623322782795 1.2312344854760031 1.0780043537718136 1.10357901687737 1.1474069587092184 0.9189178523878642 0.9975009116835466 0.9694044708069743 1.0739436914637703 1.18517029704785 1.0 13.330334739275509 -6.3994627189674205 1.017706121765582 1.0226718828260506 1.191524318938779 0.3482855533382154 0.07589537138780653 0.3826697938361279 0.6914529463146054 0.009536238585117984 0.045003567498958084 3.9859998776385335e-07 6.3994627189674205 0.16885243611272838 S(ph)QEGLRPRPK ddPTM_A549_MK2206_60min_R1 3 SQEGLRPRPK 10 2 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 S(1)QEGLRPRPK;S(1)QEGLRPRPK;S(1)QEGLRPRPK 72.705 0.00041196 163399000.0 5229.9 5719.4 4710.4 4859.2 6456.6 5604.5 5492.3 4586.200000000001 8569.3 7527.7 7864.799999999999 True False 6112.579261221224 6010.493030467437 5378.405549753967 6049.704218137777 5506.842693006303 6197.564470033988 6490.179816517271 5236.307894648448 6628.367232360168 5827.187341785294 5911.7531025624585 1.033970660677916 1.016702309144504 0.9097818289168214 1.023335060375834 0.9315075574822896 1.0483462963545693 1.0978435167909995 0.8857453624676516 1.1212185484348276 0.9856953158716135 1.0 12.529370302937298 -7.301770848189794 22.87713657833081 1.047111027912577 0.9830950767344848 0.017173351185874264 0.06972060252827644 274.23816507481513 155554.93566655077 0.010689611211877012 0.0170887972236156 4.991477890986941e-08 7.301770848189794 -0.06401595117809222 S(ph)QEGLRPRPK ddPTM_A549_PD325901_60min_R1 4 SQEGLRPRPK 10 2 Q27J81-2 Q27J81-2 INF2 Inverted formin-2 1 S(1)QEGLRPRPK;S(1)QEGLRPRPK;S(1)QEGLRPRPK;S(1)QEGLRPRPK 110.15 3.997e-05 329530000.0 12919.900000000001 12975.7 14516.7 13991.9 14434.599999999999 15862.8 15642.000000000002 16591.7 17634.2 16186.099999999999 18498.2 True False 14231.51873687231 14069.207777223106 15501.890558008563 14856.147885089513 13420.763492666641 15733.618616094576 16237.264869630832 16260.76552756314 16893.095898582364 15164.1068836629 16223.038669751228 0.8772412509505867 0.8672362843747601 0.9555479015723924 0.9157438496888773 0.827265703168816 0.9698317889996032 1.0008769133926882 1.0023255111807294 1.0413028189398632 0.9347266681880771 1.0 13.98575644960974 -7.513069566776491 3.852663345084377 1.0167212682566822 0.8924042802830113 0.5994802227185977 0.0404314904059195 0.08223503556825712 2.714351718906815 0.005154305700457548 0.008097404829860697 3.0685304213167777e-08 7.513069566776491 -0.12431698797367086 S(ph)QEIEELER ddPTM_A549_PD325901_60min_R1 2 SQEIEELER 9 0 K7EQS5;K7EQS9;K7EPK6;K7EK08;O43310;O43310-2 K7EQS5 CTIF CBP80/20-dependent translation initiation factor 1 S(1)QEIEELER;S(1)QEIEELER 104.24 0.00061764 10671600.0 554.78 704.09 503.69 524.82 704.51 629.5 633.79 537.36 551.97 602.21 628.23 True False 611.1008571925496 763.4261353040702 537.8734323340243 557.2369394473008 655.0276480275575 624.3735607100598 657.9092252731955 526.6419332492351 528.7726204273803 564.1863578261987 550.9616926780882 1.109153077815882 1.3856247093935787 0.9762446999165312 1.0113896244559402 1.1888805641706786 1.133243143774905 1.1941106505522405 0.9558594367774631 0.95972665151573 1.0240028759237847 1.0 9.105808204207147 -8.267780920661243 24.939976885793012 0.9785664483423283 1.141973929750731 0.3579473946458759 0.10151151523942986 391.0856168885687 1538056.9406610278 0.016210136328108648 0.019833739836099092 5.397828466676227e-09 8.267780920661243 0.16340748140840267 S(ph)QEMVHLVNK ddPTM_A549_MK2206_60min_R1 7 SQEMVHLVNK 10 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK 112.15 4.352e-05 287456900.0 20645.789999999997 20869.699999999997 19913.91 18759.6 32959.0 27829.799999999996 26303.670000000002 28327.399999999998 39401.6 29636.100000000002 29835.5 True False 24130.2946108967 21931.878588304073 22738.00188122049 23355.702842150436 28110.77476052329 30774.730964073846 31082.70635878062 32342.895699024113 30477.200511425937 22941.284426834634 22426.521932090105 1.075971329123874 0.9779438227076019 1.0138889101963104 1.0414322342480922 1.2534611851826916 1.3722471570608679 1.3859797989586777 1.442171719581032 1.3589802557754673 1.022953291477978 1.0 14.452918273696188 -6.729584609481749 6.604540199323795 1.2312671708756016 1.021347392659967 0.39230971249518387 0.1372422217263943 0.2104328845860832 27.82517218347791 0.025212128226785452 0.0520465468108281 1.863869022925084e-07 6.729584609481749 -0.20991977821563457 S(ph)QEMVHLVNK ddPTM_A549_PD325901_60min_R1 7 SQEMVHLVNK 10 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK 127.71 2.4801e-12 332401800.0 27505.3 30019.199999999997 29660.100000000002 27261.8 33106.799999999996 27221.7 27822.300000000003 30417.199999999997 32229.5 33759.1 33430.2 True False 30297.617807668343 32549.02333639155 31673.012746670393 28945.699469960015 30781.492580259677 27000.015500525875 28881.092851446745 29810.505084168206 30875.006196105318 31627.544664635967 29318.497331498045 1.0333959979292113 1.1101872980857999 1.0803081886684143 0.9872845508648386 1.0499000761266806 0.9209208505893878 0.9850809379789947 1.0167814791838454 1.0530896535046854 1.0787573560483 1.0 14.839523542095161 -6.246569315665085 24.228633435510275 1.0144321572098876 1.0781861881217794 0.29557828322609847 0.043150371418298826 500.5553489980379 815579.9931103021 0.005716636246199536 0.015040698728198946 5.668010998908884e-07 6.246569315665085 0.0637540309118918 S(ph)QEQEVLER ddPTM_A549_MK2206_60min_R1 1 SQEQEVLER 9 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(1)QEQEVLER 87.001 0.0011594 3000000.0 379.25 413.49 265.1 243.72 499.6 392.16 218.64 272.51 667.27 393.68 337.53 True False 443.25812822771934 434.5348748414137 302.69516627882507 303.43141094100673 426.10950181611827 433.6581109052603 258.36405787799936 311.1391270268739 516.1344104112319 304.7474145773656 253.7119856459041 1.747091794261377 1.7127092901628898 1.1930660883372095 1.1959679798671163 1.67950087470768 1.7092535451222237 1.0183360365110539 1.2263477668773544 2.0343319969580804 1.2011549781597217 1.0 7.98704786535893 -11.191711843225155 1.6243477802861348 1.0005221454750135 1.5639520083349983 0.1748654916400606 0.3056016612040807 0.425185048468712 2.0203442982748285 0.2519019889644643 0.053003086725528614 6.431142856480825e-12 11.191711843225155 0.5634298628599848 S(ph)QERDNLGMLVWSPNQNLSEAK ddPTM_A549_MK2206_60min_R1 1 SQERDNLGMLVWSPNQNLSEAK 22 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 S(0.999)QERDNLGMLVWS(0.001)PNQNLSEAK 66.874 0.00024144 1989600.0 500.35 442.21 739.89 672.96 730.11 729.68 540.8 612.29 1116.8 763.11 796.41 True False 584.7968476169798 464.7166001683757 844.8175276425494 837.8352302103222 622.7117861708685 806.8942532776161 639.0563597714143 699.0839825594829 863.8465831631323 590.7229209970878 598.6394172021883 0.9768766152254 0.7762880071283702 1.411229370078742 1.3995657588436854 1.0402118007550945 1.3478802599547008 1.0675146697792126 1.1677880915806282 1.443016544417374 0.9867758520778683 1.0 9.225543465486595 -5.7522423119840544 24.999647391588493 1.221663806737628 0.876582235701256 0.3584648499174846 0.16963236055910397 165.0451389289911 448618.778215421 0.025400212103473513 0.09567094041784066 1.7691216121789702e-06 5.7522423119840544 -0.34508157103637194 S(ph)QERDNLGMLVWSPNQNLSEAK ddPTM_A549_PD325901_60min_R1 2 SQERDNLGMLVWSPNQNLSEAK 22 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 S(0.997)QERDNLGMLVWS(0.003)PNQNLSEAK;S(1)QERDNLGMLVWSPNQNLSEAK 88.571 5.9129e-07 3626000.0 2039.77 1852.15 1844.5700000000002 2079.3999999999996 2799.5 2079.9 2432.8999999999996 2596.0 2268.38 2594.9 3159.8 True False 2246.8459488006915 2008.2371806209915 1969.7536125004904 2207.839815339958 2602.8727777507 2062.9619839886464 2525.4853408339627 2544.2207434773977 2173.0478771039398 2431.057571151595 2771.164631622531 0.8107948272582968 0.7246906797612953 0.7108035336562409 0.7967191086901454 0.9392703515513277 0.7444386235475197 0.9113443900138398 0.9181052307194552 0.7841641208561504 0.8772692691766198 1.0 11.436276706838353 -14.999999999999998 0.1889610857870229 1.812523316097824 0.7707839533988649 0.27326479808224124 0.07836490250013559 32.332114764858154 0.3691922627053101 9.801561427684256 0.07459398586756981 1.000000000000004e-15 14.999999999999998 -1.041739362698959 S(ph)QESGYYDR ddPTM_A549_MK2206_60min_R1 2 SQESGYYDR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.998)QES(0.002)GYYDR;S(0.999)QES(0.001)GYYDR 153.75 1.6386e-05 26737000.0 3278.3999999999996 3669.9 3192.6000000000004 2970.1000000000004 6958.0 4459.4 3562.3 4476.0 7435.0 3779.5 3910.0 True False 3831.7137708154396 3856.6822345897235 3645.3586867664135 3697.7746333328546 5934.487417206866 4931.290748089849 4209.5237988419185 5110.4867071751005 5750.984371255275 2925.7083250232517 2939.03908948978 1.3037301152332168 1.3122255666423435 1.2403233083229428 1.2581576905718501 2.0191930887986587 1.677858169945581 1.4322789424255993 1.73882910419619 1.9567566800391385 0.9954642439040025 1.0 11.52112883175546 S(ph)QESGYYDR ddPTM_A549_PD325901_60min_R1 2 SQESGYYDR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.998)QES(0.002)GYYDR;S(0.998)QES(0.001)GYYDR 132.79 4.7561999999999996e-05 23154000.0 4708.1 4995.9 4899.5 4656.4 5046.7 3904.6000000000004 4363.0 4341.3 4658.4 6132.6 5140.7 True False 5186.062846079966 5416.922026112571 5232.009533086923 4944.015252548321 4692.237202169841 3872.802232166004 4529.036352525206 4254.709365816037 4462.623648022373 5745.386589403938 4508.426489582234 1.1503044040007235 1.2015105577588159 1.160495695155881 1.096616583185423 1.040770480124794 0.8590141684942657 1.0045714093355178 0.9437237971268978 0.9898406147542387 1.2743662567594232 1.0 12.138408283158347 -6.64424512477708 2.1322878215563517 0.9826390294914518 1.1730069962118463 0.30041133327567293 0.09803364032893451 0.10321237375537785 0.9480133708888817 0.006334480130536408 0.015387278556847945 2.268584054759575e-07 6.64424512477708 0.19036796672039458 S(ph)QEVTRDEESTR ddPTM_A549_PD325901_60min_R1 1 SQEVTRDEESTR 12 1 C9J9Y9;A0A0U1RQD7;C9JYK5;F1LLU6;J3QTA2;Q99933-4;Q99933-3;Q99933-2;Q99933 C9J9Y9 BAG1 BAG family molecular chaperone regulator 1 1 S(0.987)QEVT(0.013)RDEESTR 54.598 0.0056485 5378100.0 260.53 358.26 338.9 329.78 390.29 236.97 262.14 392.22 332.18 426.42 396.16 True False 286.978813807951 388.45182751357925 361.89979197125405 350.1497616152791 362.87737682740556 235.04019488715315 272.1158811485121 384.3968644093623 318.2196297870667 399.4957684267076 347.43483146515035 0.8259932160449968 1.1180566608001223 1.041633593399672 1.0078142140748518 1.0444473149025768 0.6765015294982851 0.7832141642246564 1.106385513474113 0.9159117076578601 1.1498437469323777 1.0 8.440598585915815 S(ph)QGGEEEGPLSDK ddPTM_A549_MK2206_60min_R1 2 SQGGEEEGPLSDK 13 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 S(1)QGGEEEGPLSDK;S(1)QGGEEEGPLSDK 223.29 5.0642999999999996e-46 60284000.0 3909.9 5401.7 5610.9 6180.299999999999 10128.0 8325.1 6807.9 8462.5 11767.5 11461.7 10067.099999999999 True False 4569.795532122772 5676.6234574738555 6406.609990470987 7694.473777444212 8638.184616480474 9206.056556245865 8044.807307115035 9662.08529031933 9102.180038836104 8872.494009503635 7567.161232174569 0.6038982640798779 0.7501655222222045 0.8466332081350307 1.0168243468539202 1.1415356897315807 1.216579939793397 1.0631209062798317 1.276844115497027 1.202852662916027 1.172499664970658 1.0 12.885536469369443 -6.011795942884871 1.3244818899570423 1.121596275061096 0.6199201590427521 0.8526040407843355 0.07798725219317193 0.18841467003761006 0.5588081913271772 0.014535607474846089 0.08717039916888682 9.732043850819386e-07 6.011795942884871 -0.5016761160183438 S(ph)QGGEEEGPLSDK ddPTM_A549_PD325901_60min_R1 2 SQGGEEEGPLSDK 13 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 S(1)QGGEEEGPLSDK;S(1)QGGEEEGPLSDK 220.64 1.2562e-38 83039000.0 6414.6 6673.9 6143.7 6497.9 7908.0 6776.7 6540.5 7955.2 7916.4 7426.1 7557.5 True False 7065.805469821067 7236.332975054086 6560.648427069317 6899.260525198374 7352.569361118964 6721.512802007726 6789.402306598929 7796.527295266329 7583.70123802256 6957.214778653849 6627.975410939703 1.0660578882291432 1.0917863338947016 0.9898419985446446 1.0409303139252608 1.109323572471813 1.0141125132892974 1.024355385415701 1.1763060077739411 1.144195741207096 1.049674198726013 1.0 12.694352534991344 S(ph)QGLSGDK ddPTM_A549_MK2206_60min_R1 2 SQGLSGDK 8 0 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(0.994)QGLS(0.006)GDK;S(0.999)QGLS(0.001)GDK 105.65 0.0019676 135057000.0 20657.7 21462.8 20129.1 15598.800000000001 24634.0 21232.6 18301.5 22561.5 25456.0 31193.0 30889.0 True False 24144.214727725157 22555.164844969157 22983.709059008284 19420.506700256752 21010.371232462487 23479.419638940795 21626.645651546856 25759.66171669595 19690.256644878846 24146.479635520645 23218.408806969263 1.03987378844316 0.9714345643788895 0.9898916523560163 0.8364271152994547 0.9049014257237125 1.0112415469182878 0.9314439172530797 1.1094499166955791 0.8480450494509597 1.0399713363765397 1.0 14.5029814850452 S(ph)QGLSGDK ddPTM_A549_PD325901_60min_R1 2 SQGLSGDK 8 0 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(1)QGLSGDK;S(1)QGLSGDK 96.82 0.0024753 171714000.0 22791.0 23729.0 25530.0 25155.0 27299.0 21528.0 23251.0 25867.0 26551.0 28175.0 29647.0 True False 25104.725542152577 25728.726106932732 27262.619324361498 26708.767218849964 25381.612416437354 21352.683105585646 24135.829528435403 25351.06239273106 25435.15380358965 26396.025691624436 26000.60694781732 0.9655438272090049 0.9895432886843663 1.0485378044857572 1.0272362976931233 0.9761930737762285 0.8212378714250802 0.9282794658169139 0.9750181002932015 0.978252309826362 1.0152080582042071 1.0 14.666257680894939 -5.2189905185202345 18.9108316812571 0.979424709164161 0.9655430506925219 0.0 0.05763434305966033 6923.438816537871 3082792.187506126 0.008121603255907625 1.8612095202543877 6.039618148748289e-06 5.2189905185202345 -0.013881658471639136 S(ph)QGLSGDKTSGFRPIAK ddPTM_A549_MK2206_60min_R1 2 SQGLSGDKTSGFRPIAK 17 2 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(0.976)QGLS(0.021)GDKT(0.002)S(0.001)GFRPIAK;S(0.964)QGLS(0.011)GDKT(0.013)S(0.013)GFRPIAK 62.611000000000004 0.00064036 18006200.0 6487.299999999999 9003.3 8830.4 8441.0 11281.7 7564.0 8208.6 7155.5 12422.2 12074.599999999999 13961.8 True False 7582.197640742745 9461.52951379646 10082.683501729674 10509.045378930887 9622.176874777617 8364.417459423163 9699.99636616056 8169.814037799697 9608.591534177169 9346.939473826093 10494.699733922873 0.7224787590858068 0.9015531414598922 0.96074054116466 1.001366941920372 0.9168606171432491 0.797013508865449 0.9242757403345683 0.7784704893834877 0.9155661217365311 0.89063429262423 1.0 13.357373269516588 -9.902262501212014 0.9949407039832848 0.9885256305174229 0.8843768431046485 0.03650545237903269 0.08439006394691526 0.5287230785026271 1.0671776467039846 0.027520388735628037 0.01552629500897136 1.2523839659581093e-10 9.902262501212014 -0.10414878741277445 S(ph)QGLSGDKTSGFRPIAK ddPTM_A549_PD325901_60min_R1 4 SQGLSGDKTSGFRPIAK 17 2 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(0.996)QGLS(0.004)GDKTSGFRPIAK;S(0.989)QGLS(0.01)GDKTSGFRPIAK;S(0.996)QGLS(0.003)GDKTSGFRPIAK;S(0.996)QGLS(0.002)GDKT(0.001)S(0.001)GFRPIAK 78.234 7.4387e-05 53689600.0 18789.1 18179.0 21073.2 21892.1 23758.9 28195.2 25129.3 26343.699999999997 25772.4 23211.800000000003 24534.5 True False 20696.555600195636 19711.008129206053 22503.354075445946 23244.325296433515 22090.15682775536 27965.587639288773 26085.60926278058 25818.254237267127 24689.27565393522 21746.202986649423 21516.91203700962 0.9618738769111965 0.9160704888927664 1.045844963103424 1.0802816527042869 1.0266415919607677 1.299702652090006 1.2123305248407712 1.1999051812294947 1.1474358221788077 1.0106563130083637 1.0 14.393183426377423 -5.998912629678211 1.7726801830564738 1.105969330520421 0.9330831979955162 0.3703544938368807 0.08974751140469286 0.3927823484947257 2.298212049739095 0.01496993448763876 0.06997797222385267 1.00250689972491e-06 5.998912629678211 -0.1728861325249048 S(ph)QLDSLK ddPTM_A549_MK2206_60min_R1 1 SQLDSLK 7 0 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 S(1)QLDSLK 69.979 0.02161 2036700.0 1409.9 1377.2 1391.5 1046.4 1423.3 1587.9 1415.9 1498.2 1884.3 1649.1 1787.1 True False 1647.8566512544803 1447.293597503192 1588.8356238286858 1302.7680469746804 1213.9344554341094 1755.9305240372862 1673.1507022935393 1710.5744380450722 1457.5090586087854 1276.5671646503079 1343.313748549153 1.2267101807260212 1.0774054825734811 1.182773291455335 0.969816655551792 0.9036864669517604 1.3071633681511712 1.245539773638606 1.2733990401665876 1.0850101550609224 0.9503119922870329 1.0 10.391580589138107 -9.456228030811173 1.666948963667728 1.0237394400297313 1.1405716235805043 0.20109246389825852 0.12182638461587988 0.4821062745307956 2.730898066221199 0.028692635906697368 0.02370370388950186 3.497614729271478e-10 9.456228030811173 0.11683218355077307 S(ph)QLDSLKR ddPTM_A549_MK2206_60min_R1 1 SQLDSLKR 8 1 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 Q14693 LPIN1 Phosphatidate phosphatase LPIN1 1 S(0.994)QLDS(0.006)LKR 41.163999999999994 0.038350999999999996 2758200.0 1209.2 1031.3 1087.8 1143.0 1134.6 1101.2 1007.9 966.45 1828.9 1381.1 1676.5 True False 1413.2833978983751 1083.7887649615468 1242.066397126011 1423.0350513112191 967.701842995532 1217.7282530825998 1191.0223835310808 1103.447247128995 1414.6570701531643 1069.1085507843925 1260.1787809538653 1.121494361957611 0.8600277844237277 0.9856271315613293 1.1292326714421292 0.7679083774629588 0.9663138845750653 0.9451217569538521 0.8756275409539623 1.1225844233644136 0.8483784737076383 1.0 10.299412707354529 -8.765889994296007 24.998685659617177 1.0578870853661568 0.9536097388003945 0.0 0.1209964567169794 142.43590268499918 800047.3340604183 0.01756242394982956 0.019005423724019366 1.7143915035875803e-09 8.765889994296007 -0.10427734656576237 S(ph)QMEEVQDELIHR ddPTM_A549_MK2206_60min_R1 1 SQMEEVQDELIHR 13 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 S(1)QMEEVQDELIHR 45.723 0.027045 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)QMEEVQDELIHR ddPTM_A549_PD325901_60min_R1 2 SQMEEVQDELIHR 13 0 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 S(1)QMEEVQDELIHR;S(1)QMEEVQDELIHR 44.567 0.018068999999999998 981420.0 155.48 0.0 153.29 0.0 0.0 0.0 0.0 0.0 0.0 95.803 0.0 True False 171.26421514167347 0.0 163.69318120765277 0.0 0.0 0.0 0.0 0.0 0.0 89.75398223015772 0.0 0.0 S(ph)QPKAPPVDDAEVDELVLQTK ddPTM_A549_PD325901_60min_R1 1 SQPKAPPVDDAEVDELVLQTK 21 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(1)QPKAPPVDDAEVDELVLQTK 148.04 2.2477e-22 3173600.0 1640.7 1457.9 1316.5 1739.4 1532.7 1640.2 1932.2 1625.3 2100.4 1883.8 1967.7 True False 1807.2626561804977 1580.7623495004952 1405.8456067576146 1846.8387875359813 1425.0484395279523 1626.842755006576 2005.7309283404106 1592.8821164768149 2012.1274923377543 1764.8565465086804 1725.685374278009 1.0472723957208125 0.9160200190963856 0.8146592812990556 1.0702059686335699 0.8257869370447455 0.9427226881882876 1.1622807715917316 0.9230431805352953 1.1659874519012985 1.0226989072368187 1.0 10.75295374202686 -7.656034382285989 8.308713425660072 1.0718757904958967 0.9297809165879505 0.26052282445192976 0.0975093815104361 0.2298736191009729 16.549143274991216 0.01510955331805253 0.022420534753959564 2.2078299363121413e-08 7.656034382285989 -0.14209487390794617 S(ph)QQGPR ddPTM_A549_MK2206_60min_R1 1 SQQGPR 6 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(1)QQGPR 67.169 0.055063 6388000.0 1516.4 1170.2 1061.4 741.58 608.48 450.5 427.37 437.7 568.8 1033.9 1095.1 True False 1772.33124757947 1229.7581816716784 1211.9224801521866 923.2671332907909 518.973398048582 498.171610982302 505.0175970331166 499.74531540003215 439.9677081869536 800.341271925265 823.1564467775598 2.15309162008957 1.4939543831380497 1.472286932692495 1.12161805560187 0.6304675132901234 0.6051967556501712 0.6135135052517989 0.6071085482673472 0.5344885652166256 0.9722833066039752 1.0 9.685022841005301 -5.882700882099114 1.0055309402755985 0.7265638836378248 2.1548558184071385 0.8564598936936306 0.18494764967178282 0.27667921250414806 0.38059289638886257 0.03370242034579111 0.33499571349774687 1.3100839253320314e-06 5.882700882099114 1.4282919347693137 up S(ph)QQGPR ddPTM_A549_PD325901_60min_R1 1 SQQGPR 6 0 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(1)QQGPR 82.426 0.041688 7963000.0 718.74 682.9 787.4 547.79 716.08 597.6 430.19 457.03 741.68 604.83 669.13 True False 791.7059556915774 740.450379637758 840.8376990208479 581.6257441786453 665.7850111418905 592.7333437336482 446.5611158590008 447.9141781169008 710.509768861676 566.6409305790663 586.8312519645498 1.3491203016900744 1.261777345972856 1.4328441033192325 0.9911294639328122 1.134542526344712 1.0100575621174568 0.7609702352491229 0.7632759445196676 1.210756527507839 0.9655943317301323 1.0 9.196801894210852 -6.26630227708983 24.962838360079232 1.0436141217804813 1.3393002637730396 0.542934445490113 0.14187327589730503 299.41786461260637 1537012.6465594699 0.02302855654310642 0.05513928931331515 5.416237788886685e-07 6.26630227708983 0.29568614199255827 S(ph)QS(ph)PVHLR ddPTM_A549_MK2206_60min_R1 2 SQSPVHLR 8 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 2 S(1)QS(1)PVHLR;S(1)QS(1)PVHLR 50.284 0.036417000000000005 7881600.0 1033.3400000000001 1006.5899999999999 857.6200000000001 762.71 1699.5 1190.52 820.64 1192.3600000000001 1632.68 1091.3400000000001 1440.3899999999999 True False 1207.7425292625749 1057.8211315064898 979.2434119352913 949.5739842393527 1449.5058013140358 1316.5000361967823 969.7396654637829 1361.3806814493532 1262.880586854211 844.8055360314519 1082.701410258359 1.115489938241032 0.9770201844052904 0.9044445704579067 0.8770414218013822 1.338786287318263 1.2159400770362285 0.8956667611916931 1.2573925447501677 1.1664163128344471 0.7802756401969225 1.0 10.080419712895537 S(ph)QS(ph)PVHLR ddPTM_A549_PD325901_60min_R1 2 SQSPVHLR 8 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 2 S(1)QS(1)PVHLR;S(1)QS(1)PVHLR 56.358999999999995 0.010723 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)QSAAVT(ph)PSSTTSSTR ddPTM_A549_MK2206_60min_R1 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 2 S(0.5)QS(0.5)AAVT(0.249)PS(0.188)S(0.164)T(0.143)T(0.103)S(0.073)S(0.066)T(0.015)R 48.907 0.036183 2268400.0 417.21 569.96 593.48 188.84 754.51 397.11 429.85 259.5 429.78 702.42 509.29 True False 487.6248481948237 598.9685295040078 677.6443880918785 235.1058084773498 643.5225784933534 439.1319166197162 507.9481809314766 296.28491968542005 332.4355162176318 543.7428341481233 382.8192373110612 1.273773104037095 1.5646249486080912 1.7701419417991682 0.614143140059374 1.6810089874622909 1.1470999203284498 1.326861691954998 0.7739551485618593 0.8683876979450489 1.4203644465920686 1.0 8.580519519274537 -8.24501045723348 22.119932868579834 0.92382111791714 1.342691682186907 0.16300345707067865 0.33006299455030524 156.74981151694914 211047.582320161 0.04433110292050008 0.057101727590542925 5.688392337867877e-09 8.24501045723348 0.4188705642697671 S(ph)QSAAVTPSSTTSSTR ddPTM_A549_MK2206_60min_R1 2 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 S(0.999)QS(0.001)AAVTPSSTTSSTR;S(1)QSAAVTPSSTTSSTR 155.79 3.3573e-20 10930900.0 1733.6499999999999 1845.6799999999998 1958.17 1856.2599999999998 2196.78 1947.3200000000002 1986.47 1553.43 2329.7 3179.7 2509.27 True False 2026.247736326924 1939.6172284633258 2235.867950781616 2311.0437833306787 1873.6365720568685 2153.3841098736016 2347.385885715833 1773.6334596798529 1802.02666976643 2461.403561602442 1886.1490066711042 1.074277657364453 1.028347824908377 1.1854142715520322 1.2252710550209807 0.9933661473351361 1.1416829223233773 1.2445389401438507 0.9403464166440212 0.9553999516437234 1.304988923407814 1.0 10.881227938773625 -8.283625012739273 24.973892314064724 0.9754559556170161 1.1251068790561174 0.0 0.12370768145913204 504.2357112048903 567606.049559666 0.01212076681985697 0.014659498480656839 5.2044517580838805e-09 8.283625012739273 0.14965092343910125 S(ph)QSAAVTPSSTTSSTR ddPTM_A549_PD325901_60min_R1 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 S(0.998)QS(0.002)AAVTPSSTTSSTR 90.654 1.0317e-05 5636300.0 1284.0 1434.8 1182.8 1239.2 1493.8 1397.2 880.07 1218.3 1299.5 1354.2 938.1 True False 1414.3507347691582 1555.7156314310387 1263.0719207542018 1315.742569572606 1388.8806413302373 1385.8216664401834 913.5615454427822 1194.0000507621392 1244.886534132979 1268.6955808907826 822.7196471058596 1.7191162745955102 1.8909426034782226 1.535239768732157 1.5992599352660275 1.6881578630290441 1.6844397375402282 1.1104165904588321 1.4512842314661616 1.5131357790131867 1.5420752200992949 1.0 9.684257086235109 -12.385504110492205 0.11863294359283057 1.4613482110000322e-16 1.9719348372674448 0.25554425987104434 0.21491478771068334 17.283705199608637 0.28043188625794657 5.588142006820448 0.827289759415229 4.116194514058016e-13 12.385504110492205 1.9719348372674446 S(ph)QSES(ph)SDEVTELDLSHGK ddPTM_A549_MK2206_60min_R1 1 SQSESSDEVTELDLSHGK 18 0 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 2 S(0.556)QS(0.451)ES(0.483)S(0.483)DEVT(0.027)ELDLSHGK 55.864 0.00088528 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)QSESSDEVTELDLSHGK ddPTM_A549_PD325901_60min_R1 1 SQSESSDEVTELDLSHGK 18 0 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.583)QS(0.393)ES(0.018)S(0.006)DEVTELDLSHGK 134.81 2.8618e-13 16547000.0 2298.6 2032.2 2232.9 2330.5 2127.2 2125.5 2204.5 1949.7 2179.4 2258.5 2053.0 True False 2531.9521798601154 2203.460626006521 2384.438021518479 2474.449692050482 1977.7928104416105 2108.190632707278 2288.3934538486883 1910.811703989938 2087.8073970676546 2115.8979245619785 1800.494015039261 1.4062541495340124 1.2238089144431137 1.324324325213869 1.374317088189002 1.0984723047793543 1.1708956625780882 1.2709808723239706 1.061270789033015 1.159574749834494 1.175176316548789 1.0 10.814177088584877 -2.0000000123362502 0.06787204479723537 0.7437544944588012 2.3026478658971596 0.4582532394345272 0.0904876422844089 92.18563065689689 0.45030087575053424 1.8358071257456943 13.783921684016683 0.009999999715947346 2.0000000123362502 1.5588933714383586 S(ph)QSESSDEVTELDLSHGKK ddPTM_A549_PD325901_60min_R1 1 SQSESSDEVTELDLSHGKK 19 1 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.344)QS(0.285)ES(0.2)S(0.168)DEVT(0.003)ELDLSHGKK 57.745 0.0024849 6730900.0 2806.7 3281.1 2872.4 2825.1 3537.3 3279.2 3169.5 3897.7 3443.0 3119.4 4460.9 True False 3091.634117816666 3557.609812021451 3067.3383371443792 2999.6000107323825 3288.8522510225225 3252.4952824152933 3290.1170569169494 3819.9573158135 3298.302683355022 2922.4405516398674 3912.2375799749834 0.790247027338364 0.9093542350881972 0.7840368266090817 0.7667223550241453 0.8406575990826081 0.8313644598332628 0.8409808938387602 0.9764124079187252 0.8430732070663544 0.746999764686723 1.0 11.933778268716086 -14.999999999952573 0.1741130554305761 1.6594517364714914 0.8020020509000515 0.0 0.09175014022855725 27.37333172087353 0.2980671766077681 6.145762963356113 0.06444505100173831 1.0000000001092047e-15 14.999999999952573 -0.8574496855714399 S(ph)QSFSKER ddPTM_A549_MK2206_60min_R1 1 SQSFSKER 8 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 S(0.589)QS(0.369)FS(0.042)KER 43.083999999999996 0.020298 14388000.0 2510.1 3140.1 3731.1 3290.8 2760.0 2595.0 2184.6 1902.9 3900.6 4357.8 4735.4 True False 2933.7435139469976 3299.9176775484857 4260.226084130229 4097.046147729626 2354.0076561498922 2869.601177578412 2581.51354207957 2172.6419023868416 3017.1203279782562 3373.3699533764557 3559.469489608671 0.8242080800275475 0.9270813212986071 1.1968710777174265 1.1510271852843037 0.6613366578986163 0.8061878844462005 0.725252330330659 0.6103836284394454 0.8476320240379301 0.9477170581808596 1.0 11.797446519746003 -5.245945873781653 20.172388584392298 0.9006696087048607 0.8242072874326065 0.005299108871533398 0.17767411931094382 940.1161856601937 1223692.5032168895 0.02579530462441183 0.6320084104713408 5.676153430274997e-06 5.245945873781653 -0.07646232127225416 S(ph)QSFTHSPSGDPK ddPTM_A549_MK2206_60min_R1 2 SQSFTHSPSGDPK 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.484)QS(0.484)FT(0.032)HS(0.001)PSGDPK;S(0.435)QS(0.435)FT(0.125)HS(0.006)PSGDPK 52.861999999999995 0.007126 9287500.0 3212.5 4008.6 3713.5 3392.4 4331.799999999999 3486.5 3672.9 3804.5 5745.799999999999 5670.5 6880.2 True False 3754.6914619157506 4212.620617885054 4240.1301394810125 4223.538152290625 3694.5979583007584 3855.439115848606 4340.218387212332 4343.799525792603 4444.385474157169 4389.530111666712 5171.6564561400455 0.7260133177365243 0.8145592526517541 0.8198785390021259 0.8166702850643205 0.7143935390206264 0.7454940498360517 0.8392317672337672 0.8399242220808055 0.8593736865256344 0.8487667633945882 1.0 12.33641072734997 -9.76855268982488 0.4275345162173888 1.0156158795938182 0.7729293985692872 0.4063383339046813 0.05743392227194983 0.37355128218256567 0.14235985102066112 0.03722666295349302 0.014106760246537172 1.7039125833202669e-10 9.76855268982488 -0.24268648102453094 S(ph)QSGGYSDR ddPTM_A549_PD325901_60min_R1 1 SQSGGYSDR 9 0 F6WMK9;K7EMY9;K7EPM4;K7EQR7;D6W5Y5;Q14011;Q14011-3;Q14011-2 F6WMK9 CIRBP Cold-inducible RNA-binding protein 1 S(0.978)QS(0.022)GGYS(0.001)DR 104.24 0.00061764 44823000.0 1131.9 959.15 961.4 979.93 1360.8 1220.2 1044.1 1259.2 1490.2 1278.0 1404.1 True False 1246.809654739261 1039.9809366372172 1026.646385367848 1040.458050517498 1265.2221025051451 1210.263095756021 1083.8337968534424 1234.0842681767092 1427.5720763100937 1197.3068618951563 1231.404601323247 1.0125101476796985 0.8445485224918526 0.8337197897950283 0.8449359775003592 1.0274625424864892 0.9828313898254823 0.8801605870960466 1.002176105928614 1.159303834642203 0.9723098814220363 1.0 10.266089149178649 -8.501948944607292 5.574016385090124 1.0756885082888528 0.9169813607581659 0.32094557025170223 0.07855883631960621 0.12947819989564271 12.7777316335415 0.014259322993507063 0.016858508898812987 3.1481183832130473e-09 8.501948944607292 -0.15870714753068682 S(ph)QSHLPYFTPKPPQDSAVIK ddPTM_A549_MK2206_60min_R1 2 SQSHLPYFTPKPPQDSAVIK 20 1 Q5RGS4;Q9HB21-2;Q9HB21 Q5RGS4;Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 S(0.561)QS(0.438)HLPYFTPKPPQDSAVIK;S(0.54)QS(0.454)HLPY(0.006)FTPKPPQDSAVIK 86.006 1.2533e-05 6293900.0 2316.0 2629.0 3283.5 2667.5 3730.1 2866.4 2742.2 2954.3 4415.6 4094.3 4025.8 True False 2706.884179236382 2762.804870633091 3749.1496736194695 3321.0376197486244 3181.4072312335925 3169.720545437672 3240.4222443882645 3373.0810721642993 3415.473650264264 3169.3947863851567 3026.082753572367 0.8945175659987609 0.9129971304887582 1.2389448600483592 1.097470852648711 1.0513285624716842 1.0474665776062262 1.0708306772387055 1.114669143856787 1.128678204927546 1.0473589271951027 1.0 11.563235725797707 -5.578737941287403 19.160133849354185 1.0760025508111677 0.899137293966951 0.5811800949243078 0.05980951362957699 4.876375988758879 1672.3765620297936 0.009209900786610024 0.03567020017256619 2.6379226611479035e-06 5.578737941287403 -0.17686525684421672 S(ph)QSHLPYFTPKPPQDSAVIK ddPTM_A549_PD325901_60min_R1 2 SQSHLPYFTPKPPQDSAVIK 20 1 Q5RGS4;Q9HB21-2;Q9HB21 Q5RGS4;Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 S(0.533)QS(0.458)HLPY(0.007)FT(0.001)PKPPQDSAVIK;S(0.935)QS(0.064)HLPY(0.001)FTPKPPQDSAVIK 95.35700000000001 8.159e-07 15032500.0 3209.6 3597.2 3518.0 3773.8999999999996 4376.7 4938.2 4275.5 4240.4 4360.700000000001 4344.4 4468.7 True False 3535.436229217361 3900.3486683744995 3756.7526354525558 4007.0052318512394 4069.295690795317 4897.984936454993 4438.206492143369 4155.8218954705535 4177.4349437427345 4070.093842580057 3919.078229423257 0.9021091242002705 0.9952209269750877 0.9585806701300296 1.0224356334017148 1.0383297940429645 1.2497798333501993 1.1324618270752174 1.06040799703101 1.0659228265411527 1.0385334520814156 1.0 11.93629865578403 -6.390081337722889 2.2491746524363325 1.0587903970974186 0.95262692022452 0.39244613295180364 0.06777061001422156 0.3424814648701239 3.3526966483110425 0.011265970571371854 0.031595633663957345 4.073039879068034e-07 6.390081337722889 -0.10616347687289862 S(ph)QSIEQESQEK ddPTM_A549_MK2206_60min_R1 2 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(1)QSIEQESQEK;S(0.995)QS(0.005)IEQESQEK 119.96 1.2907999999999999e-05 5708600.0 2539.1000000000004 2780.9 2724.8 2630.1 3065.5 2211.3 2578.9 3255.2 3539.0 3269.0 3251.7 True False 2967.63800496507 2922.435931815734 3111.217612510534 3274.4746180696757 2614.569010843293 2445.2982982578583 3047.452748177701 3716.6345686319005 2737.4221506217123 2530.5306295808996 2444.2131476455024 1.214148613767085 1.1956551066877703 1.272891284259539 1.3396845611537438 1.0696976298330994 1.0004439672593206 1.2468031894490446 1.520585294376685 1.1199604884126642 1.0353150387144208 1.0 11.255154385548138 -9.143081495434974 3.348058401237019 1.0457849884813828 1.227042945855525 0.27874136034259844 0.12987112001541004 0.22210311458380724 5.181497811795451 0.026064468254928457 0.0251947727627443 7.193139859440344e-10 9.143081495434974 0.1812579573741422 S(ph)QSIEQESQEK ddPTM_A549_PD325901_60min_R1 2 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(0.96)QS(0.04)IEQESQEK;S(1)QSIEQESQEK 154.65 3.981e-13 7424000.0 3109.5 3141.2 3306.3 3574.9 3775.1000000000004 3612.7999999999997 3537.6000000000004 3081.5 3753.3999999999996 2920.2 3658.3999999999996 True False 3425.1741509070866 3405.9199480423567 3530.6854003970407 3795.7134538130285 3509.9499993879895 3583.37855462002 3672.225303848996 3020.037065110016 3595.6576508000962 2735.818073635549 3208.439992508343 1.0675512582142146 1.061550147733829 1.1004367881715524 1.1830401885888344 1.0939740208897992 1.1168600824659811 1.1445516551419332 0.9412789617888304 1.1206872059929125 0.8526941691362909 1.0 11.647656285395875 -12.331104933710039 0.38536526965259765 0.8603904770382671 1.1002740091252816 0.38098668086904175 0.07221684834780337 7.846170523695564 0.5952730133812638 0.9429958932793961 0.01609989685267616 4.665466402570541e-13 12.331104933710039 0.23988353208701452 S(ph)QSKLDR ddPTM_A549_MK2206_60min_R1 1 SQSKLDR 7 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.992)QS(0.008)KLDR 44.863 0.021244 9472700.0 3125.7 3288.2 2904.8 2393.2 4772.3 2815.6 3008.6 3018.3 4936.7 5455.9 5441.1 True False 3653.241743972003 3455.55533496224 3316.7443191502484 2979.53410743483 4070.3009918275848 3113.5449231559815 3555.2236760508067 3446.15326815608 3818.5453322899693 4223.408400712885 4089.924703279498 0.8932295846529054 0.8448946094756732 0.8109548609759792 0.7285058585664661 0.9952019382077675 0.7612719424050501 0.8692638456644588 0.8425957733140634 0.9336468539941766 1.0326372016889096 1.0 11.997858567632237 -9.058175728607022 0.9134868849724296 0.985171089769567 0.8369227567248069 0.478261437280573 0.06834775629905572 0.29850629483890495 0.5201562396784547 0.016051107633363267 0.014346387039327243 8.746298020993083e-10 9.058175728607022 -0.14824833304476015 S(ph)QSLPGADSLLAKPIDK ddPTM_A549_PD325901_60min_R1 2 SQSLPGADSLLAKPIDK 17 1 H0Y4W2;F2Z2U4;Q9Y4A5-2;Q9Y4A5 H0Y4W2 TRRAP Transformation/transcription domain-associated protein 1 S(0.553)QS(0.446)LPGADS(0.001)LLAKPIDK;S(0.561)QS(0.439)LPGADSLLAKPIDK 89.87299999999999 1.7671e-06 4531100.0 5295.3 6039.5 5796.6 5972.7 6760.1 6056.6 5694.1 5765.6 5089.4 5693.4 6138.5 True False 5832.874957806175 6548.4698606270895 6189.992133787463 6341.62011401412 6285.293897078951 6007.277057659334 5910.792091431077 5650.600584974303 4875.510216865247 5333.917752358275 5383.503415157577 1.0834719527405454 1.2163955988565882 1.14980741283811 1.1779727112569311 1.1675099674651135 1.1158676041228996 1.0979452664205407 1.049614005828379 0.9056389196555452 0.9907893319692728 1.0 12.394329623746547 -8.274019334000268 1.707913477534156 0.9559723789320055 1.1566477758997322 0.7828700057694183 0.04156545013855309 0.11395998653981852 0.6473007939905094 0.008188557590721965 0.010532057917867344 5.320845713023763e-09 8.274019334000268 0.20067539696772674 S(ph)QSLPTTLLSPVR ddPTM_A549_MK2206_60min_R1 2 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.988)QS(0.012)LPTTLLSPVR;S(0.991)QS(0.003)LPT(0.003)T(0.003)LLSPVR 58.486999999999995 0.011366 3661200.0 1083.43 1293.49 1165.0 940.03 1423.0 1271.0 839.94 1015.13 1888.96 1464.4 1788.82 True False 1266.2864966796526 1359.3231160575115 1330.2145179737122 1170.33739219955 1213.6785850367014 1405.496376378482 992.5462256405366 1159.0277862052415 1461.1135760492757 1133.5910229300305 1344.606625079567 0.9417523854642024 1.0109448300368693 0.989296418121543 0.8703938909495522 0.9026272535024004 1.0452844349887922 0.7381684777745333 0.861982801948976 1.0866476103840514 0.8430651774179309 1.0 10.39296844773768 -8.765392557666342 24.999934583615754 1.0409169286119406 0.9212688919362534 0.0 0.10061454716612458 93.81127185712587 593261.7608213373 0.014638265354168865 0.015869616483768313 1.716356275760757e-09 8.765392557666342 -0.11964803667568724 S(ph)QSPINCIRPSVLGPLK ddPTM_A549_PD325901_60min_R1 1 SQSPINCIRPSVLGPLK 17 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.571)QS(0.423)PINCIRPS(0.006)VLGPLK 46.027 0.0086959 4586200.0 3096.2 3248.6 3288.1 3074.7 3456.6 3252.5 3668.3 3814.9 3695.3 3468.8 3711.1 True False 3410.523944698028 3522.3709229626916 3511.2502389515507 3264.6172358496533 3213.820340622639 3226.012718362938 3807.899163870783 3738.8088267688454 3539.999391751903 3249.779376010888 3254.658226601167 1.047890041671021 1.0822552408647517 1.078838389313259 1.0030599247463494 0.9874524809871742 0.9911986124982027 1.1699843420571272 1.1487562030970226 1.0876716218061144 0.9985009637723548 1.0 11.668290337830042 S(ph)QSREEQAVLLVR ddPTM_A549_MK2206_60min_R1 1 SQSREEQAVLLVR 13 1 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 S(0.5)QS(0.5)REEQAVLLVR 58.07899999999999 0.0034082 4659300.0 219.92 354.09 218.3 325.61 375.96 224.37 333.71 301.1 356.12 338.47 353.58 True False 257.0371194722217 372.11166855932726 249.25822255249898 405.3844646171884 320.6567820312003 248.11268447524793 394.3407873877933 343.7818470800768 275.45938860678245 262.0093919223759 265.7763276884388 0.9671181843310673 1.4000933484021272 0.9378495997758556 1.5252843176176616 1.2064911304181165 0.9335394413534925 1.4837317936383956 1.2935006291571662 1.0364331202954042 0.9858266693695958 1.0 8.054068801358783 -8.825530051885018 7.090722890080769 1.016464625707465 1.2241693991153755 0.18437204461821277 0.1972819444368045 0.25327390119970594 23.03402016093225 0.03162422407349686 0.03364026463769176 1.4944106300226589e-09 8.825530051885018 0.2077047734079105 S(ph)QSREEQAVLLVR ddPTM_A549_PD325901_60min_R1 2 SQSREEQAVLLVR 13 1 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 S(0.93)QS(0.07)REEQAVLLVR;S(0.81)QS(0.19)REEQAVLLVR 95.197 4.7468e-05 15001900.0 1359.85 1855.19 1827.8 1648.1599999999999 2097.3199999999997 1800.6100000000001 1795.98 2172.24 2285.12 2205.45 2033.33 True False 1497.9009709313407 2011.5333720898718 1951.8454994542876 1749.963099957057 1950.0114785612086 1785.946429150342 1864.3270016979661 2128.9129691106855 2189.0843531188566 2066.1975106155487 1783.2433003408562 0.839986877082351 1.1280195875152759 1.0945480625561326 0.9813372631892474 1.0935195877020683 1.0015158496930672 1.0454697916664604 1.1938432454526853 1.2275859119731034 1.1586739230819527 1.0 10.800287838016953 -8.031767088482432 22.53787373430727 1.1170807169925774 1.0317163155133164 0.2648970490676952 0.09085145765249729 322.4031560256142 228735.70258977314 0.01718801231872903 0.022207587970471135 9.294647237585447e-09 8.031767088482432 -0.08536440147926094 S(ph)QSSDLLER ddPTM_A549_MK2206_60min_R1 1 SQSSDLLER 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(1)QSSDLLER 96.06700000000001 0.00090183 13375000.0 1097.9 1086.1 740.7 783.34 1291.1 702.38 657.19 726.04 1268.2 1009.6 1203.7 True False 1283.1986789221187 1141.3778508918217 845.7423978224281 975.2583351654694 1101.1809003098274 776.7053853978903 776.5929161948521 828.9583934042475 980.9547248992519 781.5306588023474 904.7880695700376 1.4182312102456267 1.261486406904341 0.9347408816125654 1.077885935906427 1.217059483148487 0.8584390218219685 0.8583147173502135 0.9161906763405657 1.084181763543157 0.8637720645164308 1.0 9.821436096019324 -5.586963672899105 3.994145731379749 1.0174472683805391 1.3912177023160603 0.5967091526137431 0.11354680002874092 0.10454769565365465 3.2387730109874022 0.014926483833605016 0.07060939237661935 2.58842941848905e-06 5.586963672899105 0.37377043393552123 S(ph)QSSDLLER ddPTM_A549_PD325901_60min_R1 1 SQSSDLLER 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.574)QS(0.213)S(0.213)DLLER 55.401 0.017749 3331700.0 300.89 240.29 372.57 325.82 264.87 421.81 167.72 406.85 633.89 998.14 1138.2 True False 331.43613129648924 260.5400815978282 397.854840645412 345.9451614090915 246.26644495189427 418.37491921065964 174.10267637990557 398.73505758234944 607.2498077118539 935.1172700563618 998.2086156442696 0.33203092630348796 0.2610076466126962 0.3985688306132544 0.3465659943095257 0.2467083945102473 0.4191257344945171 0.17441512089888667 0.39945062718677854 0.608339577714343 0.9367954307355011 1.0 9.963197545721544 -9.482002988489466 0.6419657928817112 0.966143243582587 0.3008375239675326 0.9011786126395044 0.08184209554604455 0.13491854549815 0.12242942262260362 0.03661423600884772 0.02185050885450584 3.2960744405800285e-10 9.482002988489466 -0.6653057196150544 down S(ph)QSTSEQEKR ddPTM_A549_PD325901_60min_R1 1 SQSTSEQEKR 10 1 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 S(0.52)QS(0.392)T(0.056)S(0.033)EQEKR 49.928999999999995 0.01179 19618000.0 3694.2 4370.0 3138.3 2928.5 4316.0 2650.0 2454.3 2403.7 3347.5 4119.4 5381.0 True False 4069.232464473698 4738.275236516334 3351.2839101309714 3109.386793893944 4012.859049391685 2628.4192786047 2547.699729544494 2355.756317833828 3206.8162162448243 3859.3003809787983 4719.171112969439 0.8622769480196322 1.004048194712498 0.7101424868703791 0.6588840962660979 0.8503313300853544 0.5569663010059457 0.5398616978610483 0.4991885781296703 0.6795295486174908 0.8177919996103755 1.0 12.204317767931048 -2.10892292474768 0.8007688075260359 0.7672436491521873 36.64139569178652 0.05431277901203435 0.16404885083581608 1018.6532955212322 4.039196120111675 0.031998000670564256 66153.44603202381 0.007781746432504427 2.10892292474768 35.874152042634336 S(ph)QSTTFNPDDMSEPEFK ddPTM_A549_MK2206_60min_R1 1 SQSTTFNPDDMSEPEFK 17 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.524)QS(0.393)T(0.069)T(0.014)FNPDDMSEPEFK 66.965 0.00073883 5119700.0 870.4 513.84 619.91 756.49 1019.4 992.35 648.95 1040.0 1310.1 1512.3 1070.1 True False 1017.3022407631038 539.9922612119083 707.8225595168101 941.8300839601262 869.4476103910143 1097.3598183313818 766.8558148551393 1187.4231848664224 1013.3644417998025 1170.6703796620357 804.3646367424583 1.2647277046924974 0.6713276995850865 0.8799772232446377 1.1708994166804496 1.0809122761937062 1.3642566669458578 0.9533683852149152 1.4762249987459504 1.2598321650535986 1.4553976221568543 1.0 9.65170584586135 -6.263817303714244 24.387891713072797 1.1551558342286117 0.9119425492362426 0.21434504228196505 0.21359200043093154 163.12195865754958 1672988.9098594922 0.0269476838555443 0.06552047168059723 5.447317589981726e-07 6.263817303714244 -0.24321328499236905 S(ph)QSWDDRGER ddPTM_A549_PD325901_60min_R1 1 SQSWDDRGER 10 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.558)QS(0.442)WDDRGER 61.641000000000005 0.0020691 28809000.0 817.87 1030.6 955.75 871.32 642.54 952.72 799.73 728.85 1270.3 1028.8 1232.4 True False 900.8995603159286 1117.4522788910142 1020.612942391638 925.1394574887039 597.4102070426635 944.9613641933097 830.1641627790474 714.3125149782364 1216.9137085872437 963.8413924238939 1080.82261282727 0.8335313765866819 1.0338905437664063 0.9442927361797765 0.8559586434527658 0.5527365915114674 0.8742982918551568 0.768085486856592 0.6608970857018822 1.1259143675796899 0.8917664943210517 1.0 10.077914048628264 -8.775622997017692 24.999352754393865 1.0594595748871736 0.8200111414706155 0.2591275655415106 0.13522184933376774 170.62752548899954 300738.6578502546 0.02331785678136352 0.02488136775174453 1.6763974941341802e-09 8.775622997017692 -0.23944843341655808 S(ph)QTDVR ddPTM_A549_MK2206_60min_R1 1 SQTDVR 6 0 Q8N7R7-3;Q8N7R7;Q8N7R7-2;H7BZD2;A0A494C0K2;Q8ND76;Q8ND76-3;R4GNF3;R4GN48 Q8N7R7-3;Q8ND76 CCNYL1;CCNY Cyclin-Y-like protein 1;Cyclin-Y 1 S(0.983)QT(0.017)DVR 67.032 0.05524199999999999 19571000.0 329.45 291.18 321.88 314.56 528.35 431.25 354.52 263.66 434.33 398.58 620.16 True False 385.0531057208231 305.9998182696629 367.5274240732863 391.62721412113484 450.6304149010126 476.884588759418 418.93169501879026 301.0346124248855 335.9549484824886 308.54050117416773 466.157156454727 0.8260156481330762 0.6564305921996105 0.7884195683456817 0.8401184207909281 0.9666920450781016 1.0230124801392657 0.8986919737645962 0.6457792361579283 0.7206903161962213 0.6618808633567188 1.0 8.864672605201102 -10.98943484795066 1.3040293234388876 0.9986032182784909 0.8107808327015058 0.0 0.14945523929054888 0.5261068727202486 1.61113208782022 0.08555062950480061 0.020234539018280876 1.0246254811875465e-11 10.98943484795066 -0.18782238557698505 S(ph)QTDVR ddPTM_A549_PD325901_60min_R1 1 SQTDVR 6 0 Q8N7R7-3;Q8N7R7;Q8N7R7-2;H7BZD2;A0A494C0K2;Q8ND76;Q8ND76-3;R4GNF3;R4GN48 Q8N7R7-3;Q8ND76 CCNYL1;CCNY Cyclin-Y-like protein 1;Cyclin-Y 1 S(0.997)QT(0.003)DVR 71.501 0.049423 27341000.0 653.72 670.64 759.12 542.16 669.35 366.62 714.78 618.58 645.99 835.43 653.84 True False 720.0851731567711 727.1571864112851 810.638448159393 575.6479918653027 622.3371651321424 363.6343682724738 741.9813440426238 606.2419366333775 618.8412867907376 782.6808072246246 573.4218250332536 1.255768688460737 1.2681016917504249 1.4136860732714225 1.0038822499159672 1.0853042872863308 0.6341481129557391 1.2939537904745693 1.0572355466208851 1.0792077660365473 1.364930271322051 1.0 9.163453005877443 -6.271816276096659 24.44586531407583 1.03071344927688 1.3080771060451457 0.2561686345406362 0.181269868866088 351.3451898576914 827698.6295945045 0.019793995911966445 0.046489156482226415 5.34790549301679e-07 6.271816276096659 0.2773636567682658 S(ph)QTPPRR ddPTM_A549_PD325901_60min_R1 1 SQTPPRR 7 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.516)QT(0.484)PPRR 51.346000000000004 0.020905 141270000.0 2083.2 1880.2 1711.1 1845.5 2456.1 1373.4 1543.7 1877.4 1582.7 2315.3 2415.1 True False 2294.6849304292145 2038.6510525624728 1827.2255356801782 1959.4923435654002 2283.592009085013 1362.2154857493192 1602.4463482450533 1839.9537842081922 1516.1846229875073 2169.1115628684306 2118.0580105802806 1.0833909736969591 0.9625095452432614 0.862689089039434 0.9251362964457057 1.0781536660836695 0.6431436150212503 0.7565639563413251 0.8686984846576999 0.7158371562127899 1.0241039442891193 1.0 11.048526387887701 -4.011876336672027 0.6468429801823921 0.8521102011119085 2.0757645608115145 0.19285300222720736 0.12650845448957826 16.209996329954894 1.3745622983997632 0.0226832272841583 21.333713488416773 9.730242484504655e-05 4.011876336672027 1.223654359699606 S(ph)QTPPRRS(ph)R ddPTM_A549_PD325901_60min_R1 1 SQTPPRRSR 9 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.5)QT(0.5)PPRRS(1)R 62.14 0.006051300000000001 21820000.0 1067.7 1329.8 1076.2 1232.4 1433.2 1004.0 1066.9 1069.3 1469.4 1538.7 1596.0 True False 1176.092118000803 1441.8669129335055 1149.237403716328 1308.5225490165258 1332.5369762715864 995.8237568751391 1107.5014633300814 1047.9719726503774 1407.6462279761442 1441.546219403815 1399.7021178775735 0.8402445798854405 1.0301241203520277 0.8210585588446235 0.9348578760462926 0.9520146888769215 0.7114540616578819 0.79124082844815 0.7487107144193372 1.005675571964281 1.0298950047955142 1.0 10.45090411269862 -8.794166971860205 24.684630426937964 1.0026801950846262 0.8576622137911882 0.3902606601234909 0.0877308586350708 131.55947449591088 99227.48602084041 0.01546780753662398 0.016467359503447434 1.606323556014362e-09 8.794166971860205 -0.14501798129343801 S(ph)QVIEK ddPTM_A549_MK2206_60min_R1 2 SQVIEK 6 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)QVIEK;S(1)QVIEK 86.898 0.039077999999999995 79776000.0 16534.9 17409.300000000003 17056.1 15362.5 22644.0 18754.6 18392.8 20472.4 25815.0 21087.8 22155.0 True False 19325.58688050764 18295.359008867497 19474.91145065357 19126.31318964884 19313.097596325428 20739.199323704062 21734.533679740518 23374.425394095535 19967.943718084054 16324.051333886828 16653.302053106407 1.1604657634191389 1.098602484391664 1.1694324277881476 1.1484997466962497 1.1597158049939338 1.2453505771749032 1.3051185651008046 1.4035910307490886 1.1990381039392337 0.980229103022955 1.0 14.023520645934052 -10.378604076515396 0.9922901289137651 1.0123376695592043 1.2082509033773075 0.5095615691876301 0.08178237581527235 0.36908146596948216 0.7041307953024651 0.04340974117989176 0.016733666213008105 4.1821145434392056e-11 10.378604076515396 0.1959132338181031 S(ph)QVIEK ddPTM_A549_PD325901_60min_R1 2 SQVIEK 6 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)QVIEK;S(1)QVIEK 107.21 0.026858 120845000.0 11788.7 12834.400000000001 13153.9 12797.7 15072.7 12942.7 13291.400000000001 13917.8 13706.400000000001 12464.4 14451.1 True False 12985.480145617741 13915.999930330725 14046.602754826436 13588.184863314502 14014.045549992139 12837.2989423385 13797.211500333155 13640.198560697116 13130.367673289938 11677.395656812181 12673.706313070566 1.0246000518589924 1.0980213353988615 1.1083263575659776 1.0721555737251716 1.105757479604783 1.0129080337848146 1.0886485105074513 1.0762596373745692 1.036032187344314 0.921387585316627 1.0 13.629550869107703 -9.244921298580218 0.5614654398379423 1.001780588162076 1.0796977899300846 0.4973944767744094 0.038680360900835285 0.4256880801704298 0.30711247447996004 0.012333603599040389 0.008344942050295488 5.689560258448354e-10 9.244921298580218 0.07791720176800854 S(ph)RADLTAEMISAPLGDFR ddPTM_A549_MK2206_60min_R1 3 SRADLTAEMISAPLGDFR 18 1 Q9H3Q1;Q9H3Q1-2;J3KRZ9;J3QQS6;J3QR93 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.828)RADLT(0.172)AEMISAPLGDFR;S(0.785)RADLT(0.215)AEMISAPLGDFR;S(0.991)RADLT(0.009)AEMISAPLGDFR 174.28 5.1253e-31 20958900.0 1306.66 1838.08 1180.73 1481.43 2112.37 2043.03 1903.6399999999999 1713.88 2380.7200000000003 2044.5900000000001 2500.21 True False 1527.1922632301432 1931.6304209255493 1348.1752685039494 1844.38041650392 1801.6431712396186 2259.2220785464438 2249.506746884718 1956.8277385373694 1841.4907212286284 1582.7156989705759 1879.3388547143838 0.8126220874958929 1.0278244479860512 0.7173667830694859 0.9813985444281272 0.9586579699132687 1.2021366305917158 1.1969670829939771 1.0412319915743784 0.9798609317362794 0.8421662197853682 1.0 10.876009500404086 -6.499732387467307 19.25692460043701 1.022497790312035 0.8666687057256647 0.3014793406259414 0.11799959244271273 40.68311928894465 33845.08793193723 0.01525144374360876 0.03504894860520811 3.1642268581368253e-07 6.499732387467307 -0.15582908458637024 S(ph)RADLTAEMISAPLGDFR ddPTM_A549_PD325901_60min_R1 4 SRADLTAEMISAPLGDFR 18 1 Q9H3Q1;Q9H3Q1-2;J3KRZ9;J3QQS6;J3QR93 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.798)RADLT(0.202)AEMISAPLGDFR;S(0.759)RADLT(0.241)AEMISAPLGDFR;S(0.999)RADLT(0.001)AEMISAPLGDFR;S(0.992)RADLT(0.008)AEMISAPLGDFR 223.6 1.6195999999999996e-64 55285600.0 3710.4399999999996 4074.59 4867.459999999999 4424.44 4935.59 4540.88 4766.32 4947.22 4784.47 4456.65 5387.200000000001 True False 4087.1211373184383 4417.969999074846 5197.795106014754 4697.727610167703 4588.931185261148 4503.900578803968 4947.704915830379 4848.543816080989 4583.395364342605 4175.256358423351 4724.608552274479 0.8650708502296668 0.9350975747923045 1.1001535997119758 0.9943104403657239 0.971282834225914 0.9532854476665035 1.0472200735971025 1.0262318586683432 0.9701111348444111 0.8837253525296475 1.0 12.205979087416559 -5.525520580291516 24.994973057045613 0.9962425022356707 0.8825774935847376 0.3522070591550128 0.05259724809440168 40.306667421011674 381357.90751892474 0.005474637291699596 0.02146988289499279 2.981806243123622e-06 5.525520580291516 -0.1136650086509331 S(ph)RAS(ph)PVSR ddPTM_A549_MK2206_60min_R1 2 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RAS(0.998)PVS(0.002)R;S(1)RAS(0.996)PVS(0.004)R 73.435 0.0015168 95366000.0 1441.71 1429.41 890.4100000000001 946.57 2619.06 1685.38 1229.22 1938.6799999999998 2496.1000000000004 1963.5300000000002 1808.08 True False 1685.0354015746477 1502.160863496251 1016.6835269948258 1178.4796924931422 2233.7997434478034 1863.7257929352995 1452.5533627185982 2213.493826958497 1930.7373354526296 1519.9672092691894 1359.083835530609 1.239831831946395 1.1052746153145017 0.7480653513901118 0.8671133168418887 1.643607027800232 1.3713103961741036 1.0687739230976119 1.628666141919282 1.4206168044805254 1.1183763426012414 1.0 10.408418736627429 -6.703367585678184 24.999999404099803 1.2649446688881654 0.9810137217612823 0.3030419728043592 0.2318021713919517 99.4205344638083 42799.88274402347 0.03726303743352991 0.07756918029402085 1.9798505762459397e-07 6.703367585678184 -0.28393094712688305 S(ph)RAS(ph)PVSR ddPTM_A549_PD325901_60min_R1 2 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RAS(1)PVSR;S(0.997)RAS(0.946)PVS(0.056)R 76.332 0.0013599 98021000.0 2605.14 2031.21 2565.8199999999997 2591.96 2943.17 2649.49 2367.99 2483.92 2714.55 3193.91 3062.12 True False 2869.6118949972943 2202.3871952321156 2739.9519747290715 2752.0594824317377 2736.4518925852954 2627.9134318756082 2458.1051552638482 2434.376267002456 2600.4669036019086 2992.2459775239076 2685.498652377993 1.0685583075814504 0.820103630765897 1.0202768012200865 1.0247852777713389 1.0189734745024666 0.9785569728544107 0.9153254100824854 0.9064894763014796 0.9683367002620578 1.114223600475201 1.0 11.39097428219051 -10.348383517139702 1.1578569949394153 0.9970268965328388 0.9669796283759824 0.08000500004794331 0.07453008474605789 1.3787038112762178 3.650125997626654 0.0253442390485089 0.011228022887098975 4.483492863947672e-11 10.348383517139702 -0.030047268156856433 S(ph)RASPATHRR ddPTM_A549_MK2206_60min_R1 1 SRASPATHRR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.5)RAS(0.5)PATHRR 42.095 0.01678 59115000.0 174.97 364.39 91.60799999999999 214.37 297.1 154.99 157.88 151.96 581.88 527.09 599.71 True False 204.5006583942098 382.9358945644703 104.59939189917232 266.8906596234351 253.39698356599004 171.39093892596452 186.56475236817846 173.50079535798227 450.0851090714213 408.02000292009643 450.7854558460144 0.4536540736666225 0.8494859130842919 0.2320380805162952 0.5920569445226365 0.5621232457254542 0.38020512131276624 0.4138659531906191 0.38488552172199875 0.9984463856020406 0.9051312495305386 1.0 8.816297158884415 -8.76859136964025 24.98518652761744 0.999266398741142 0.48782398730144755 0.6702223012751872 0.15084275425143218 58.19119717239315 203288.00312755778 0.02418981856635815 0.026014452366655033 1.7037608335467702e-09 8.76859136964025 -0.5114424114396945 S(ph)RASPVSR ddPTM_A549_PD325901_60min_R1 2 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.917)RAS(0.083)PVSR;S(0.809)RAS(0.191)PVS(0.001)R 57.203 0.0047918 307646700.0 1120.63 1315.68 929.45 883.72 1271.88 1035.69 1223.9 1203.31 1092.5 1293.5 1419.35 True False 1234.395532635796 1426.556970979362 992.5280662368899 938.3053773262607 1182.5475365477994 1027.2556840219247 1270.4761842437786 1179.309038071566 1046.5860242710892 1211.8281892499085 1244.7789480009617 0.9916584262757329 1.146032372470891 0.797352869624626 0.7537927748803281 0.9500060540442926 0.8252514919790651 1.0206440157781307 0.9474043885185106 0.840780626915198 0.9735288271030209 1.0 10.281673851101852 -6.898047720725759 0.0033537357000209475 1.8353596949041047 2.0373022464873131e-07 0.0 0.1104082504019294 207797.5674389883 191.29078730082875 51650.21204722713 53037.185436978405 1.2645973845712204e-07 6.898047720725759 -1.83535949117388 S(ph)RDAT(ph)PPVSPINMEDQER ddPTM_A549_MK2206_60min_R1 1 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 2 S(0.985)RDAT(0.985)PPVS(0.031)PINMEDQER 40.844 0.051032 623440.0 157.52 333.01 223.22 266.43 422.4 217.43 152.96 297.61 323.24 343.12 416.9 True False 184.10552500574923 349.958786599287 254.87595253398442 331.7053619604971 360.2655195498964 240.43829828164706 180.75085205369007 339.7971288924 250.02665610821177 265.6089536928105 313.3722241453426 0.5874979044740122 1.1167511337474998 0.8133329404962595 1.0585027529646391 1.1496408800506983 0.7672610389685697 0.5767928301452061 1.0843243360802821 0.797858383237721 0.8475829484160682 1.0 8.291733501481772 -5.235031261794609 23.835110484209608 0.9142362988143536 0.5874970832819281 0.24108033692527508 0.16980297506457415 5319.975367964819 4801499.010236675 0.022616845494150786 2.3656555023856116 5.820613177766249e-06 5.235031261794609 -0.3267392155324256 S(ph)RDAT(ph)PPVSPINMEDQER ddPTM_A549_PD325901_60min_R1 1 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 2 S(0.995)RDAT(0.995)PPVS(0.01)PINMEDQER 54.805 0.0058861 1207800.0 242.77 326.04 144.0 319.6 366.01 141.34 137.61 325.2 175.24 218.25 329.44 True False 267.4158316821719 353.5165350374796 153.77270594234454 339.34096613573655 340.3027202659527 140.18897390112764 142.8468238530814 318.7136308855352 167.87527221351547 204.46965775322198 288.920968492223 0.9255674071623157 1.2235752111809615 0.5322310344757263 1.1745113824954894 1.177840161764212 0.4852156443775079 0.4944148726849033 1.1031169961418503 0.5810421898057366 0.7077009980282057 1.0 8.174531101333804 -5.7421002419763045 24.986619754395782 0.813264108960327 1.0745712196762278 0.1308015135559425 0.2662937078995997 400.01892150864063 516825.4953104634 0.03717119507013411 0.143518953299164 1.8109220551704687e-06 5.7421002419763045 0.26130711071590085 S(ph)RDAVETNEK ddPTM_A549_PD325901_60min_R1 1 SRDAVETNEK 10 1 A0A0A0MTH9;O14981 A0A0A0MTH9 BTAF1 TATA-binding protein-associated factor 172 1 S(1)RDAVETNEK 50.897 0.007320999999999999 4564600.0 843.89 684.0 647.2 439.0 1005.9 753.2 606.44 762.38 1009.3 839.87 555.56 True False 929.5610915610171 741.6430804982085 691.1228839297598 466.1160329586617 935.2490541666119 747.0661889226637 629.5184060567016 747.1737328244603 966.8826309352949 786.8404648668892 487.2296419850034 1.9078500392010802 1.522163301634747 1.418474625464253 0.956666000573521 1.919524129025381 1.5332937993654703 1.2920363455146222 1.5335145246508992 1.984449523629465 1.6149273300804379 1.0 8.928458096097573 -11.097251174261695 1.4487950230355098 1.0017035239006267 1.5984197304282555 0.0 0.33629224962951093 0.38514317450720675 1.4516085550851743 0.21916686177403474 0.048445438705383266 7.993718045191213e-12 11.097251174261695 0.5967162065276288 S(ph)RDDLYDQDDSRDFPR ddPTM_A549_MK2206_60min_R1 2 SRDDLYDQDDSRDFPR 16 2 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(1)RDDLYDQDDSRDFPR;S(1)RDDLYDQDDSRDFPR 104.61 3.1366e-07 12212600.0 758.12 855.1 628.35 603.5699999999999 924.38 950.8499999999999 558.25 757.25 916.09 1097.07 1190.5500000000002 True False 886.0721217455472 898.6209375725962 717.4594784281384 751.4446770952866 788.404926518782 1051.468315876853 659.6767988949556 864.592506480864 708.5970776951236 849.2411250517943 894.9035774915749 0.9901313884890455 1.00415392247223 0.8017170748598252 0.8396934552453067 0.8809942728452267 1.174951516926696 0.7371484654738305 0.966129232497122 0.7918138842190456 0.9489750029072708 1.0 9.805588435538587 -5.695044871132003 24.999835698307503 0.9008906212376239 0.9971440128700942 0.08781001640199682 0.11452835659323232 108.45222492270071 40833.19535037797 0.015977221302832002 0.06187950215065746 2.0181578376495043e-06 5.695044871132003 0.09625339163247038 S(ph)RDDLYDQDDSRDFPR ddPTM_A549_PD325901_60min_R1 2 SRDDLYDQDDSRDFPR 16 2 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(1)RDDLYDQDDSRDFPR;S(1)RDDLYDQDDSRDFPR 108.49 2.0776e-07 14549500.0 1304.81 1070.71 1024.0700000000002 1280.51 1170.5 1254.9099999999999 1051.26 1219.84 1446.02 995.97 1829.26 True False 1437.2733506496459 1160.942489357071 1093.5695484331725 1359.6041944507879 1088.288118005785 1244.6904290240846 1091.2662745715456 1195.5093342540329 1385.2488080700045 933.0842842266966 1604.2726166345437 0.8959034367019052 0.7236566137945468 0.6816606710692797 0.8474894979526464 0.678368568235494 0.7758596737973414 0.6802249588108117 0.7452033537554124 0.8634746948283584 0.5816245160277861 1.0 10.647703606783816 -9.383162844887147 0.907049058761412 0.9738364642833661 0.7483334259129928 0.0 0.13675474881552535 0.21089380824484472 0.3686265445825354 0.01951086259532562 0.014528253340016308 4.138444688590391e-10 9.383162844887147 -0.22550303837037333 S(ph)RDFNEECPR ddPTM_A549_PD325901_60min_R1 1 SRDFNEECPR 10 1 A0A0A0MTH3;Q13418-3;Q13418;Q13418-2 A0A0A0MTH3 ILK Integrin-linked protein kinase 1 S(1)RDFNEECPR 43.544 0.055014 1797400.0 363.78 449.33 494.33 649.77 789.61 656.97 547.44 707.88 401.18 592.07 721.67 True False 400.71067779931803 487.19661602377215 527.878206447772 689.9048171652609 734.1505176066198 651.6198541377091 568.2731287706624 693.760778078883 384.31979974103 554.6865991567018 632.9091650430508 0.6331250990370182 0.7697733623285938 0.8340505014046768 1.0900534472720633 1.1599618999934729 1.0295629928085899 0.8978747032870161 1.096145886956295 0.6072274205649848 0.8764079109503363 1.0 9.30585464907225 -5.538078554199998 2.2904160926113004 0.8925659693264255 0.6340366330778999 0.23223832813578116 0.15561712255072235 0.5948158814515488 5.219816566280853 0.02839561445884149 0.24197994569541723 2.896819570163395e-06 5.538078554199998 -0.2585293362485256 S(ph)RDKEER ddPTM_A549_MK2206_60min_R1 3 SRDKEER 7 2 P08621-4;P08621;P08621-2 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 S(1)RDKEER;S(1)RDKEER;S(1)RDKEER 52.79 0.015257 85517400.0 21203.0 15458.900000000001 9122.9 7114.4 2136.4 1518.65 1513.6 1878.19 2274.18 22645.1 23210.1 True False 24781.54803642013 16245.691979699473 10416.664400019205 8857.428319377555 1822.1383900719675 1679.352535001717 1788.6015276442545 2144.429184215641 1759.0818611192087 17529.55618229501 17446.391603827808 1.4204397447425723 0.9311777672200768 0.5970669830507386 0.5076939988802155 0.1044421351674912 0.0962578722945357 0.10251985443521903 0.12291534163116828 0.10082783311669212 1.0047668641376224 1.0 14.090641057613068 -5.460502857709953 1.5203453267957843 0.43030131853682146 1.593041741862178 0.48350115723601683 0.32896404450253175 0.6486270424423863 1.8120609331584274 0.058439608603620345 1.0019003494370622 3.4633560567081915e-06 5.460502857709953 1.1627404233253567 S(ph)RDKEER ddPTM_A549_PD325901_60min_R1 3 SRDKEER 7 2 P08621-4;P08621;P08621-2 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 S(1)RDKEER;S(1)RDKEER;S(1)RDKEER 66.27 0.008010300000000001 262963000.0 16564.800000000003 15001.5 15922.4 10288.2 15637.0 9228.4 8107.5 9444.199999999999 12747.4 16266.4 17347.1 True False 18246.44630163876 16265.729052768838 17002.98981316935 10923.678747802516 14538.711064721458 9153.246970066266 8416.035349094234 9255.828022168429 12211.671108277607 15239.336727958811 15213.516672327116 1.1993575643709282 1.0691629951906954 1.1176238984966065 0.7180245687489419 0.9556443377202125 0.6016522785107088 0.5531946051896551 0.6083950359093815 0.8026856230085339 1.0016971786463191 1.0 13.893066056563347 -6.245380128842094 22.902385924545737 0.8299635758588315 1.1227597879952174 0.47212761823515115 0.15784366889509016 243.2355640824131 346879.50426486396 0.025314405154015653 0.06666376212376003 5.683552436557613e-07 6.245380128842094 0.29279621213638585 S(ph)RDS(ph)GDENEPIQER ddPTM_A549_MK2206_60min_R1 2 SRDSGDENEPIQER 14 1 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 2 S(1)RDS(1)GDENEPIQER;S(1)RDS(1)GDENEPIQER 73.983 0.0030159 8463300.0 1250.25 1456.96 914.6199999999999 1357.53 2046.33 1723.8799999999999 1593.16 1413.94 2423.83 1550.45 2032.96 True False 1461.261634322232 1531.1130408206868 1044.3268690378682 1690.1249109418366 1745.3175677569595 1906.299837381068 1882.6165498029336 1614.3703250096441 1874.8363750611531 1200.2022681657086 1528.1199251583487 0.9562480079374736 1.0019586916007446 0.6834063556429655 1.1060158846935395 1.1421338986703573 1.2474805190329097 1.2319822016638196 1.0564421668949562 1.226890863861275 0.7854110455639401 1.0 10.577542053586809 -6.439900251629329 11.936359418362844 1.1278198953279401 0.8927296981608753 0.29609262907203293 0.1457417668974448 0.6409526517431875 90.77519198658372 0.016467308484059015 0.03827254481630597 3.6316145579244434e-07 6.439900251629329 -0.2350901971670648 S(ph)RDS(ph)GDENEPIQER ddPTM_A549_PD325901_60min_R1 3 SRDSGDENEPIQER 14 1 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 2 S(1)RDS(1)GDENEPIQER;S(1)RDS(1)GDENEPIQER;S(1)RDS(1)GDENEPIQER 100.23 0.00010091 19091300.0 2446.83 2255.33 2293.66 2304.91 2336.136 2148.06 2154.86 2248.01 2416.24 2790.41 2642.13 True False 2695.230380338957 2445.3945741813227 2449.32156049804 2447.279055869589 2172.053866591682 2130.5669115470228 2236.864376484637 2203.1716770202715 2314.693835500938 2614.223036385649 2317.1647598420277 1.163158713203762 1.0553391008535953 1.0570338384850209 1.0561523713300522 0.9373756688496167 0.9194714801774707 0.9653454149014138 0.9508049298878827 0.9989336432247233 1.1281990308552219 1.0 11.178144913999123 -5.386104849326644 0.9027106083978612 0.9856060497246423 1.2211054482945196 0.44151586797087283 0.05595489876389424 0.880839020491505 0.6013665797743035 0.00612186316347604 0.1944962462654091 4.1105047147122995e-06 5.386104849326644 0.23549939856987734 S(ph)RDSDESGDK ddPTM_A549_MK2206_60min_R1 1 SRDSDESGDK 10 1 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 S(0.5)RDS(0.5)DESGDK 51.875 0.006776300000000001 4877400.0 793.16 964.07 567.81 705.17 0.0 225.2 120.36 378.26 294.66 1191.7 1063.1 True False 927.0260170997973 1013.1370451240942 648.333996094981 877.9366816562843 0.0 249.0305145243384 142.22785403492503 431.8795133726663 227.91998047533016 922.4941423284055 799.1029299326302 1.1600833664543713 1.2678429863966443 0.8113272668761706 1.098652812761305 0.0 0.31163759410234343 0.1779843981386926 0.540455424696136 0.28521980327934143 1.1544121636572875 1.0 9.642237533903284 -6.684070861947029 24.99999421632816 0.5433449283600724 1.0780701171809097 0.4102896488384311 0.33646445743338255 32.353744370976116 10452.974888530138 0.052039977989493724 0.10832984362050867 2.0698036003608162e-07 6.684070861947029 0.5347251888208373 S(ph)REDAGDNDDTEGAIGVR ddPTM_A549_MK2206_60min_R1 1 SREDAGDNDDTEGAIGVR 18 1 Q9H0S4;Q9H0S4-2 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 S(1)REDAGDNDDTEGAIGVR 60.765 0.00089901 1925400.0 0.0 0.0 0.0 172.6 168.46 106.84 0.0 134.4 0.0 150.7 160.1 True False 0.0 0.0 0.0 214.88700774830846 143.6797571576126 118.1457378853478 0.0 153.4516115827377 0.0 116.65676533430451 120.34275146478609 0.0 0.0 0.0 1.7856248517899918 1.1939211577662427 0.9817436982892886 0.0 1.2751213489384088 0.0 0.969370933557555 1.0 6.9110054371896394 -6.0946352917079905 23.385718000838715 0.6887192237348553 3.2644722722418976e-10 0.3189053072196071 0.5233205822344352 34.02536654451683 8403.43266098344 0.08125254039010961 0.21497428553355802 8.042011842344294e-07 6.0946352917079905 -0.6887192234084081 S(ph)REDAGDNDDTEGAIGVR ddPTM_A549_PD325901_60min_R1 1 SREDAGDNDDTEGAIGVR 18 1 Q9H0S4;Q9H0S4-2 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 S(1)REDAGDNDDTEGAIGVR 60.765 0.00089901 2669900.0 230.05 182.78 258.3 113.03 0.0 159.29 238.23 178.72 104.69 0.0 283.34 True False 253.40450664614096 198.1835120664658 275.82979128408056 120.01160639024495 0.0 157.99279505243115 247.29597301445807 175.15528939687226 100.29024336928171 0.0 248.4909762402455 1.0197734762052082 0.7975481245438002 1.1100193474124527 0.4829616278468623 0.0 0.6358089836617685 0.9951909592699573 0.7048758552404294 0.40359712407552106 0.0 1.0 7.957049652146495 S(ph)REDLSALTR ddPTM_A549_MK2206_60min_R1 3 SREDLSALTR 10 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 S(1)REDLSALTR;S(1)REDLSALTR;S(0.999)REDLS(0.001)ALTR 131.32 3.1322e-07 27161300.0 2237.8599999999997 2346.55 2135.4 1860.8 3173.71 2338.3900000000003 2199.9900000000002 2434.31 3421.2799999999997 3117.33 3731.67 True False 2615.556057575964 2465.9793720745843 2438.231829769154 2316.6960835344867 2706.8614631882165 2585.836877702343 2599.6997058681845 2779.380897261712 2646.3655426615005 2413.122987920289 2804.9933501473975 0.9324642632177795 0.8791391152299884 0.8692469198335281 0.825918565337329 0.9650152871292816 0.9218691650611085 0.9268113615069978 0.9908689791067279 0.9434480629062592 0.8602954398424807 1.0 11.453781635274856 -7.949169482328425 0.3805276605111106 0.9903837262451523 0.8725186253963612 0.02257733264163142 0.05236782056729949 0.7225631474652506 0.24348402440936565 0.016423785578727312 0.03077326373445687 1.1241661853301646e-08 7.949169482328425 -0.1178651008487911 S(ph)REDLSALTR ddPTM_A549_PD325901_60min_R1 2 SREDLSALTR 10 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 S(1)REDLSALTR;S(1)REDLSALTR 125.89 2.9802999999999997e-06 31376000.0 3000.3 2936.0 2917.7 3225.0 3340.4 2922.9 3123.7 2752.9 3177.9 3571.6 3320.7 True False 3304.888247295877 3183.427023892897 3115.712667555408 3424.200925493587 3105.7818277543997 2899.0968714844053 3242.5741128542286 2697.9912498917274 3044.343914444939 3346.0885664669327 2912.2749516516665 1.1348132652864882 1.0931066182770448 1.0698552572408604 1.1757821573651852 1.0664452633474693 0.9954749876347398 1.1134162009721082 0.9264205113468389 1.0453490707387951 1.1489603907657253 1.0 11.50793085333696 -6.999366698006381 24.976407992834847 1.020479504870679 1.1141163337112763 0.24127862147585588 0.06200167219907156 14.555075053098427 573970.5531086822 0.00655972464576872 0.012318036022902676 1.0014592954667552e-07 6.999366698006381 0.09363682884059732 S(ph)REDLSAQPVQTK ddPTM_A549_MK2206_60min_R1 5 SREDLSAQPVQTK 13 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.997)REDLS(0.003)AQPVQTK;S(1)REDLSAQPVQTK;S(1)REDLSAQPVQTK;S(0.999)REDLS(0.001)AQPVQTK;S(0.555)REDLS(0.445)AQPVQTK 180.27 5.6673e-23 1270417000.0 17921.2 17003.8 17661.7 15630.699999999999 25177.6 19069.0 18786.300000000003 18972.1 28049.1 25543.6 26643.9 True False 20945.86042872671 17869.220790898027 20166.394636992532 19460.222201688783 21474.008392565054 21086.86892302225 22199.52753619403 21661.45327461948 21696.02363520864 19773.283019199345 20027.48429576899 1.0458557909418378 0.8922349171270144 1.006935985527293 0.9716758188046589 1.0722269494976788 1.0528965401549244 1.108453124134213 1.0815863317988312 1.0833124777330194 0.9873073785596053 1.0 14.289693591416112 -6.7534720589292805 24.9466031470227 1.051693258716375 0.974948441471159 0.3650884031158025 0.04791959508745395 150.70202962957399 471861.6558178981 0.0069601695029313125 0.014283781989942486 1.7641192584244676e-07 6.7534720589292805 -0.07674481724521598 S(ph)REDLSAQPVQTK ddPTM_A549_PD325901_60min_R1 4 SREDLSAQPVQTK 13 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.995)REDLS(0.005)AQPVQTK;S(1)REDLSAQPVQTK;S(0.979)REDLS(0.021)AQPVQTK;S(1)REDLSAQPVQTK 223.9 3.9788e-46 1636757000.0 29413.7 28754.7 31632.9 27625.699999999997 33185.299999999996 31130.500000000004 30594.899999999998 30402.899999999998 32066.199999999997 32017.4 34097.799999999996 True False 32399.757170778503 31177.959483628434 33779.6988180805 29332.07674648313 30854.479011069972 30876.9835292844 31759.205661671676 29796.490308886343 30718.569127214258 29995.81589987635 29903.98676376313 1.0834594539762064 1.0426021028543617 1.1296051956193967 0.9808751247183862 1.0317848002948766 1.03253735942327 1.0620391826870608 0.996405280147895 1.0272399252275692 1.0030707991158054 1.0 14.868050215173144 -2.000000000000543 0.18119258053676526 1.0012813656255468 1.3510582547570458 0.3421240549007424 0.033554428775483106 43.168764239553646 0.45501533861234306 0.032644945489153476 4.212037072433786 0.009999999999987495 2.000000000000543 0.34977688913149896 S(ph)REDLSAQPVQTKFPAYER ddPTM_A549_PD325901_60min_R1 1 SREDLSAQPVQTKFPAYER 19 2 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.948)REDLS(0.052)AQPVQT(0.001)KFPAYER 44.258 0.010209000000000001 5232800.0 671.31 571.57 488.21 639.11 794.84 1033.9 855.78 801.86 1064.2 608.45 1325.2 True False 739.4608970076974 619.7382098250893 521.3428664452225 678.5863731758778 739.0131804491399 1025.4802611884527 888.3471762007844 785.8662732529989 1019.4753748551881 570.0323631612736 1162.2088011349385 0.6362547730541942 0.5332417111450994 0.4485793481654179 0.5838764708314151 0.6358695440332813 0.8823545822291438 0.764361081531375 0.6761833781378805 0.8771877943615931 0.49047328036460963 1.0 10.182653569669927 -7.8461833779545405 0.3340681358152683 1.0080643943227352 0.46820112420111093 0.0 0.17206213900302736 0.5110913049050344 0.13398473384247678 0.048717833986549025 0.09943858925226609 1.4250057673514149e-08 7.8461833779545405 -0.5398632701216243 S(ph)REDLTAVVSVSTK ddPTM_A549_MK2206_60min_R1 1 SREDLTAVVSVSTK 14 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IS03;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.967)REDLT(0.033)AVVSVSTK 89.846 1.9829e-05 3766900.0 1046.4 1471.6 841.97 1002.2 1478.2 1243.5 732.95 1064.6 1524.6 1610.1 1286.7 True False 1223.0067379762306 1546.498154288191 961.3740066080053 1247.7390449904674 1260.7587381596986 1375.0863446315045 866.1175275415283 1215.5103102007631 1179.2805342859172 1246.3772917369854 967.176878886573 1.2645119674326504 1.5989817251096206 0.9940001954086742 1.290083615756904 1.3035451587832632 1.421752705890284 0.89551099333414 1.2567611330825803 1.219301825787565 1.2886756486278204 1.0 9.917635946030096 -14.99999999986524 0.07314391824183321 0.12644154060236318 1.5556889965180685 0.02598743960954919 0.19004264426496648 180.01116750666554 0.9816280396116305 26.40674034236143 3.2672998681176497 1.0000000003102958e-15 14.99999999986524 1.4292474559157053 S(ph)REEDFR ddPTM_A549_MK2206_60min_R1 4 SREEDFR 7 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(1)REEDFR;S(1)REEDFR;S(1)REEDFR;S(1)REEDFR 86.898 0.010781 44107400.0 1981.46 1966.65 1998.25 1631.541 2584.97 2213.2999999999997 2255.37 2017.52 2767.75 2668.62 2674.69 True False 2315.882005954113 2066.744084758678 2281.6318974600595 2031.2686182426596 2204.724337289052 2447.509936930365 2665.141535017854 2303.509638395869 2140.859044188538 2065.776888562918 2010.4906553113594 1.1518989157377897 1.0279799507143728 1.1348632193004196 1.0103347721992184 1.09661008941502 1.2173694667341417 1.3256174695351224 1.1457450112043075 1.064844066065549 1.027498876010939 1.0 10.973331915221006 -9.048481635441822 2.2855244494026796 1.0239711335246942 1.1373226397299525 0.2625358343738877 0.08165421794720505 0.2975502168799847 3.170041100479394 0.017383783905041788 0.017122123226320677 8.943723505245153e-10 9.048481635441822 0.11335150620525836 S(ph)REEDFR ddPTM_A549_PD325901_60min_R1 4 SREEDFR 7 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(1)REEDFR;S(1)REEDFR;S(1)REEDFR;S(1)REEDFR 70.056 0.012594 64898000.0 3291.0299999999997 2795.93 3274.42 2971.17 3607.6 2647.5699999999997 3184.6800000000003 2757.41 3046.37 3300.09 3381.7799999999997 True False 3625.132942871763 3031.552833417188 3496.641831887025 3154.692422883341 3354.2146215443586 2626.009067719036 3305.874740123766 2702.411294403703 2918.3416629370395 3091.7217542031167 2965.842498869689 1.2222944894252936 1.0221557060337971 1.1789708432661643 1.0636749672599353 1.1309483301364391 0.8854175731583297 1.1146494601057428 0.9111782892832704 0.9839840328841628 1.042443000726236 1.0 11.534226270137385 -7.230891323823592 24.75713846837137 0.988984918441664 1.1177186057947104 0.4384505775469709 0.07537284262471364 404.38721368158457 327728.64003147074 0.009378409854061917 0.01624259710259735 5.8763638199513065e-08 7.230891323823592 0.12873368735304636 S(ph)REEDFRHPPDEDFRGPPDEDFR ddPTM_A549_MK2206_60min_R1 1 SREEDFRHPPDEDFRGPPDEDFR 23 3 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(1)REEDFRHPPDEDFRGPPDEDFR 54.605 0.0010193 3917200.0 0.0 0.0 0.0 0.0 148.04 0.0 98.381 164.23 188.39 183.17 171.48 True False 0.0 0.0 0.0 0.0 126.26351210740216 0.0 116.2555542357092 187.5101054332813 145.71996579701155 141.7917697829101 128.89678339276406 0.0 0.0 0.0 0.0 0.9795706982280697 0.0 0.9019275049049478 1.4547306806091147 1.1305166968595735 1.1000411806309662 1.0 7.010072451602993 -7.350262057952205 0.8977373048277562 1.0948101276046058 1.1257151156809507e-06 0.6958982162516469 0.30915381516740376 0.23414555945789828 0.3737069982057741 0.053667440513903465 0.12210622022835602 4.4641413978004945e-08 7.350262057952205 -1.09480900188949 S(ph)RENLSAVMLYNPGLEFER ddPTM_A549_PD325901_60min_R1 1 SRENLSAVMLYNPGLEFER 19 1 A0A1B0GTU3;Q96L93-5;Q96L93-6;Q96L93-4;Q96L93;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(0.499)RENLS(0.499)AVMLY(0.001)NPGLEFER 42.806000000000004 0.015567 1177300.0 847.82 703.77 686.89 733.2 838.58 906.25 904.02 734.94 792.93 911.98 971.74 True False 933.8900622679034 763.07916778103 733.5064860051187 778.4880987819832 779.6810337439484 898.8698004662302 938.4229757987255 720.2810451507237 759.6059095883516 854.3974271605192 852.2221403673899 1.0958293830119301 0.8953993702300076 0.8606986972773398 0.9134802558008875 0.9148800492414229 1.0547365034176779 1.1011483172617116 0.8451799255534632 0.8913238387128597 1.0025524880076355 1.0 9.735085722379 -5.248797954133645 23.578506329286437 0.9451644101048124 1.0958295967768055 0.22799246485367364 0.07808218849567819 1073.1697403505573 2001571.5735222674 0.011092885702200598 0.25482310682468196 5.638999367380103e-06 5.248797954133645 0.15066518667199302 S(ph)RENSVCSDTSESSAAEFDDRR ddPTM_A549_MK2206_60min_R1 3 SRENSVCSDTSESSAAEFDDRR 22 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.307)RENS(0.272)VCS(0.272)DT(0.039)S(0.039)ES(0.035)S(0.035)AAEFDDRR;S(0.323)RENS(0.323)VCS(0.323)DT(0.007)S(0.007)ES(0.008)S(0.008)AAEFDDRR;S(0.495)RENS(0.495)VCS(0.01)DTSESSAAEFDDRR 55.67 0.0018765000000000001 8372000.0 996.41 1236.48 1349.3899999999999 1026.56 1563.97 1062.41 1273.17 831.68 1254.38 1592.32 1611.1599999999999 True False 1164.5796481143886 1299.4115505669092 1540.7537926253617 1278.06724608403 1333.9120847785316 1174.8335210293176 1504.4885088205835 949.5731869131796 970.2649328332477 1232.6138060857315 1211.0645062461263 0.9616165300097644 1.0729499080066576 1.2722309874320041 1.0553254921536663 1.1014376838713484 0.9700833563943576 1.2422860228015173 0.7840814275504797 0.801167012846184 1.017793684587785 1.0 10.242059995576158 -8.267684935686589 24.997295766835673 0.8943312639185935 1.0961468222801518 0.4176684494373356 0.11112182215457375 377.3268823060725 1510215.6934521045 0.0189478873007673 0.02320056156306448 5.3990215918691375e-09 8.267684935686589 0.2018155583615583 S(ph)RENSVCSDTSESSAAEFDDRR ddPTM_A549_PD325901_60min_R1 1 SRENSVCSDTSESSAAEFDDRR 22 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.833)RENS(0.159)VCS(0.008)DTSESSAAEFDDRR 53.865 0.0015382 3901200.0 372.55 447.95 361.28 298.53 476.46 506.31 442.66 538.27 372.64 344.69 554.64 True False 410.3710017431856 485.70031858066164 385.7986333531266 316.9695200891784 442.9950932977672 502.1867792265453 459.5056685328465 527.533782585354 356.97923669050664 322.9262145748367 486.4227961526427 0.8436508424132501 0.9985147127608008 0.7931343604876208 0.6516337692152718 0.9107202557150558 1.0324079858069721 0.9446631041293767 1.0845169814364752 0.7338867329287013 0.6638796888818104 1.0 8.926067031890337 S(ph)RERPSQPEGLR ddPTM_A549_MK2206_60min_R1 3 SRERPSQPEGLR 12 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.996)RERPS(0.004)QPEGLR;S(0.5)RERPS(0.5)QPEGLR;S(0.5)RERPS(0.5)QPEGLR 74.76899999999999 0.00026660000000000003 210241000.0 2006.57 1760.51 1544.01 962.48 1879.55 1287.79 1143.01 1117.39 2015.73 2466.9300000000003 2478.4300000000003 True False 2345.229960073554 1850.1124392538077 1762.9738351043702 1198.287643207369 1603.07068482483 1424.063083034181 1350.6801216389133 1275.7834543633585 1559.170373459367 1909.648799642705 1862.967429811805 1.2588679343204978 0.9930997234024129 0.9463256345187226 0.6432144889019443 0.8604931353989214 0.7644057862987108 0.7250154243305035 0.6848125382912554 0.8369284124397562 1.0250575340630703 1.0 10.863386736579995 -5.31889957969981 1.8115230284387773 0.8595934307964673 1.3562785131525517 0.522618220151033 0.11960852918991025 0.549411380284367 1.972938534362935 0.01889352378565442 0.4449015899148984 4.798443884460138e-06 5.31889957969981 0.49668508235608433 S(ph)RERPSQPEGLR ddPTM_A549_PD325901_60min_R1 4 SRERPSQPEGLR 12 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(1)RERPSQPEGLR;S(0.5)RERPS(0.5)QPEGLR;S(0.979)RERPS(0.021)QPEGLR;S(0.5)RERPS(0.5)QPEGLR 85.90899999999999 9.8206e-05 343965000.0 2805.54 2954.95 2631.16 2832.2000000000003 3247.4900000000002 2869.0299999999997 2024.06 2580.0 3168.3900000000003 3574.8900000000003 3913.46 True False 3090.356355470611 3203.974006897926 2809.726340050413 3007.1385616071134 3019.397505632301 2845.665570903863 2101.0867109081296 2528.539876029153 3035.2335866730214 3349.170835305457 3432.1292294669015 0.9004195788835794 0.9335237086616304 0.8186540051951471 0.876172882940716 0.8797447018337627 0.8291254147635544 0.6121817013383505 0.7367263022383049 0.8843587708218293 0.9758288838750019 1.0 11.744888160110564 -9.67478504475455 1.2167298300867202 0.9761292477063739 0.8269945403933495 0.3368481803277372 0.08525257021078142 0.355328928427225 1.074646415242853 0.025714694365062327 0.018030336426587436 2.1145353759580821e-10 9.67478504475455 -0.14913470731302436 S(ph)RERPSQPEGLRK ddPTM_A549_MK2206_60min_R1 3 SRERPSQPEGLRK 13 3 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(1)RERPSQPEGLRK;S(0.99)RERPS(0.01)QPEGLRK;S(1)RERPSQPEGLRK 101.05 4.3176e-05 222539000.0 7654.049999999999 8053.719999999999 7741.59 7410.05 16280.7 11045.509999999998 11698.099999999999 10799.810000000001 19093.6 14401.599999999999 15612.9 True False 8945.866516443974 8463.619947780577 8839.463871416401 9225.51258264978 13885.830596912876 12214.338536783867 13823.493347340946 12330.716140530998 14768.930086213813 11148.268557654405 11735.786035881076 0.7622724621165398 0.7211804920355437 0.753205950107693 0.7861009526284505 1.1832041377082232 1.0407772005590135 1.1778924142854086 1.0506936734217016 1.2584525690106467 0.9499379524788206 1.0 13.518626853033034 -6.720770807433292 6.741154704251959 1.1207545487983441 0.7502891292699374 0.7755119410697225 0.08696280393521474 0.0698159563624117 8.325747647192781 0.013687927518491008 0.02838629480910531 1.902081810982211e-07 6.720770807433292 -0.3704654195284067 S(ph)RERPSQPEGLRK ddPTM_A549_PD325901_60min_R1 4 SRERPSQPEGLRK 13 3 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(1)RERPSQPEGLRK;S(0.956)RERPS(0.044)QPEGLRK;S(1)RERPSQPEGLRK;S(0.98)RERPS(0.02)QPEGLRK 122.31 2.2434e-06 357817000.0 15872.7 15411.1 16380.099999999999 16179.2 18895.1 17055.0 17642.5 18352.200000000004 19353.5 19582.399999999998 20358.2 True False 17484.084819135845 16709.847482260157 17491.75208754304 17178.552438370796 17567.973360556265 16916.109734567228 18313.894991846435 17986.15097397763 18540.13969860917 18345.963922046718 17854.27046126268 0.9792662689338103 0.9359020027457572 0.9796957050412014 0.9621537029833872 0.9839647830289355 0.9474545471498865 1.0257431146000042 1.0073864968608537 1.0384148564812312 1.0275392636092768 1.0 14.123981565088036 -7.767909975952084 24.99999295346831 1.018141883396396 0.9648648726844484 0.7372562719579987 0.016357844756151162 67.16320995005637 259493.8068380777 0.0028195472248409986 0.003944639818826915 1.7064360761181104e-08 7.767909975952084 -0.05327701071194757 S(ph)RERS(ph)PSPLRGNVVPS(ph)PLPTR ddPTM_A549_MK2206_60min_R1 2 SRERSPSPLRGNVVPSPLPTR 21 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 S(0.851)RERS(0.851)PS(0.329)PLRGNVVPS(0.962)PLPT(0.006)R;S(0.861)RERS(0.861)PS(0.283)PLRGNVVPS(0.976)PLPT(0.019)R 54.31100000000001 0.002542 18270200.0 1430.1 1823.08 1704.1 1087.1399999999999 2039.64 1710.08 1664.5 1538.1999999999998 2580.8 2289.1 2237.6 True False 1671.4659174118954 1915.866984995731 1945.7670043596577 1353.4893488035693 1739.6116578947704 1891.0395305407656 1966.9181043630163 1756.2445605399344 1996.2529206907357 1771.9907201510046 1681.9421653816714 0.9937713387621752 1.1390801802991701 1.156857259665714 0.8047181268545173 1.0342874408526481 1.1243189982764032 1.1694326623393005 1.04417654583349 1.1868736998086613 1.0535384370656402 1.0 10.715912383149576 -7.192527383319739 7.917622238144194 1.0956227202782054 1.026788030199776 0.11186017070821586 0.0991474099911777 0.6847400623864415 71.94290062005747 0.016125375170589398 0.02797883675315921 6.419077463927387e-08 7.192527383319739 -0.06883469007842935 S(ph)RERSPS(ph)PLRGNVVPSPLPTR ddPTM_A549_PD325901_60min_R1 1 SRERSPSPLRGNVVPSPLPTR 21 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 S(0.772)RERS(0.413)PS(0.814)PLRGNVVPSPLPTR 58.26 0.0012943 19073000.0 2414.1 2593.1 2090.8 2236.7 2831.7 2002.6 2112.6 1916.6 2647.0 2464.6 2850.4 True False 2659.1776548335097 2811.6296374852423 2232.694261001763 2374.8558790857373 2632.81116083467 1986.2914895599135 2192.996149059077 1878.3719094563853 2535.755795190457 2308.9847353887335 2499.8188701743347 1.0637481325389233 1.1247333440959113 0.8931424142926233 0.9500111817781891 1.0532007707626674 0.7945741642559053 0.877262018950253 0.7514032043951206 1.0143758115617456 0.9236608151644632 1.0 11.287607849722212 -5.7515172844758 24.98189434029267 0.9607332859335831 1.0942407803963736 0.2567499888480804 0.09500358981496851 246.75008166372533 621254.713000664 0.014160556158318922 0.05354856740970094 1.772077516860524e-06 5.7515172844758 0.13350749446279053 S(ph)RERSPS(ph)R ddPTM_A549_PD325901_60min_R1 1 SRERSPSR 8 2 Q8N684-2;Q8N684;Q8N684-3;F5H669 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 2 S(1)RERS(0.387)PS(0.613)R 62.162 0.00868 72341000.0 2140.7 2674.2 2014.8 1492.6 2225.7 1533.1 1018.1 1504.1 1890.7 2448.0 2981.3 True False 2358.0222880999518 2899.564219105717 2151.5364439766377 1584.7945120594502 2069.3745102481644 1520.6149418976852 1056.8443526256967 1474.099545556377 1811.2404540863597 2293.4328622217054 2614.6190000178017 0.9018607636844592 1.1089815453364238 0.8228871755165815 0.6061282779818628 0.7914631195727083 0.5815818449599471 0.4042058719142258 0.5637913384498241 0.6927359030413333 0.8771575752360441 1.0 11.352385018196854 -5.917767006446475 6.268240846473438 0.7601009185065475 1.0019856137515366 0.2798323707796976 0.17036005105461702 0.2783631794035039 16.89233871552959 0.02952079221535658 0.09376194314313548 1.2084619859581063e-06 5.917767006446475 0.24188469524498912 S(ph)RES(ph)LNVDVVK ddPTM_A549_MK2206_60min_R1 1 SRESLNVDVVK 11 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 2 S(1)RES(1)LNVDVVK 42.556000000000004 0.022354 2123500.0 249.05 383.61 251.89 220.17 454.79 569.01 431.58 536.05 593.38 304.23 410.93 True False 291.0835513120988 403.1341104692127 287.61178964154345 274.1116598838071 387.89099345667006 629.222260521731 509.9924995379936 612.0367290842746 458.9803774331478 235.50423170308864 308.8847399089603 0.9423694786537264 1.305127959989319 0.9311298114834461 0.8874237683758605 1.255779076593411 2.0370778456300105 1.6510770318025654 1.9814404857445025 1.485927655631114 0.7624340126757327 1.0 8.27092478783161 -6.989901589358465 20.034270450456333 1.3936169483471452 1.036099218725503 0.24152418892478622 0.36952011795396955 29.259589886668046 58041.229559515356 0.05718477202878188 0.10785348989702608 1.023524895596342e-07 6.989901589358465 -0.3575177296216423 S(ph)RES(ph)LNVDVVK ddPTM_A549_PD325901_60min_R1 2 SRESLNVDVVK 11 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 2 S(1)RES(1)LNVDVVK;S(1)RES(1)LNVDVVK 66.335 0.0015145999999999998 12485700.0 2169.83 2539.5 2842.8 2510.3 3002.8 2109.81 2322.05 2450.7 2697.9 2435.9 2696.5 True False 2390.1095442555807 2753.512577376025 3035.7295031451185 2665.355529695053 2791.893687097627 2092.628406865276 2410.4168834245165 2401.8188659630405 2584.5166451999744 2282.096858286706 2364.8475945218543 1.010682273898853 1.1643509644150047 1.2836892788259824 1.1270728548720528 1.180580809336306 0.884889331436338 1.019269440029972 1.0156336803804311 1.0928893055040763 0.96500800456366 1.0 11.207531494986835 -7.191065348854619 24.999986707740447 1.030546830537252 1.159680252878251 0.4621886012611516 0.07964771144441504 131.20774544149492 46610.49326414734 0.01166717921043073 0.020208146368494703 6.440723438214973e-08 7.191065348854619 0.129133422340999 S(ph)RESASPTIPNLDLLEAHTK ddPTM_A549_MK2206_60min_R1 2 SRESASPTIPNLDLLEAHTK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(0.311)RES(0.311)AS(0.311)PT(0.067)IPNLDLLEAHTK;S(0.318)RES(0.318)AS(0.318)PT(0.045)IPNLDLLEAHTK 122.04 7.2089e-15 8270300.0 965.99 922.22 821.4200000000001 879.15 1210.48 1339.11 897.7 817.36 1720.12 1723.4899999999998 1615.25 True False 1129.025495811983 969.1570588798965 937.9097075999715 1094.5417894665427 1032.4199955131605 1480.813731370723 1060.8004699829858 933.2232830600184 1330.515566467199 1334.1524119842104 1214.1388463678682 0.929898173663989 0.7982258880680394 0.7724896624515029 0.9014963920649574 0.8503310791856097 1.2196411767901345 0.8737060618366683 0.7686297871547254 1.0958512450593894 1.098846656603869 1.0 10.245717699264123 -7.062063071810251 24.99188520899622 1.0204712919288061 0.8455538852303834 0.3056046312163675 0.1185896558826284 199.79917373878226 80455.77475937664 0.017626317928757185 0.030529707088978935 8.668359775790039e-08 7.062063071810251 -0.1749174066984227 S(ph)RESASPTIPNLDLLEAHTK ddPTM_A549_PD325901_60min_R1 1 SRESASPTIPNLDLLEAHTK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(0.355)RES(0.355)AS(0.254)PT(0.035)IPNLDLLEAHTK 132.1 3.2302e-17 10368000.0 729.95 379.73 507.32 567.91 590.09 693.63 603.5 657.81 557.6 698.82 657.92 True False 804.0539866392112 411.73117976255105 541.7497859629877 602.9885108828103 548.6441140999865 687.9813072522932 626.4665227478719 644.6894635080379 534.1660111062329 654.6963859386331 577.0000108985049 1.3935077494836396 0.7135722218122715 0.9389077568982616 1.0450407270250066 0.9508563322999551 1.1923419311222683 1.0857305215165207 1.117312740608318 0.9257642998557818 1.1346557600911293 1.0 9.172427535895428 -8.779768348938441 24.958131408319666 0.9649442565917368 1.0412753321276975 0.0 0.1684881866262049 611.649821952169 832865.9616972873 0.026395020456736414 0.02812481003525941 1.6604723610500232e-09 8.779768348938441 0.07633107553596075 S(ph)RESLNVDVVK ddPTM_A549_MK2206_60min_R1 7 SRESLNVDVVK 11 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 1 S(0.5)RES(0.5)LNVDVVK;S(0.987)RES(0.013)LNVDVVK;S(0.973)RES(0.027)LNVDVVK;S(0.5)RES(0.5)LNVDVVK;S(0.998)RES(0.002)LNVDVVK;S(0.5)RES(0.5)LNVDVVK;S(0.5)RES(0.5)LNVDVVK 161.8 4.9914e-14 246251400.0 19763.5 19858.57 18609.3 16660.87 25336.829999999998 19819.85 18804.93 18231.68 26904.65 25145.600000000002 27081.899999999998 True False 23099.09562881617 20869.286390189503 21248.378565946947 20742.783897934878 21609.815870495757 21917.173371648347 22221.542366043403 20816.076472178316 20810.78973289755 19465.191495622348 20356.716807583947 1.1347161650453643 1.0251793836624281 1.0438018451988686 1.0189650960908931 1.0615570317530263 1.0766556109619332 1.0916073832576336 1.022565508423403 1.0223058035146628 0.9562048575716562 1.0 14.313217277536408 -8.443949928439094 6.010047671910647 1.0110818402365127 1.0608935239972839 0.4329797712643477 0.03468693041132579 0.18666311437102776 11.28052596099572 0.004980296746448587 0.006008915264067459 3.5979081449739727e-09 8.443949928439094 0.049811683760771164 S(ph)RESLNVDVVK ddPTM_A549_PD325901_60min_R1 4 SRESLNVDVVK 11 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 1 S(0.998)RES(0.002)LNVDVVK;S(0.998)RES(0.002)LNVDVVK;S(0.896)RES(0.104)LNVDVVK;S(0.994)RES(0.006)LNVDVVK 147.14 4.8582e-12 488791000.0 39844.9 43856.399999999994 41737.5 41922.4 53195.0 42855.2 41893.5 45042.3 46145.7 45557.6 48452.8 True False 43889.924915734926 47552.3327420492 44570.057737976415 44511.85143532162 49458.76671278747 42506.201459796255 43487.780067502805 44143.89599149923 44206.35670499442 42681.08536109132 42493.412767605616 1.032864203112298 1.1190518634525912 1.0488698091096582 1.0475000367411003 1.1639160870244767 1.0003009570509336 1.0234005045755052 1.0388409194836863 1.0403108111545856 1.0044165102603566 1.0 15.374951594821772 S(ph)RESMIQLF ddPTM_A549_PD325901_60min_R1 1 SRESMIQLF 9 1 G3V5D8;G3V232;P30520;Q8N142;Q8N142-2 G3V5D8 ADSSL1;ADSS Adenylosuccinate synthetase isozyme 2;Adenylosuccinate synthetase isozyme 1 1 S(0.5)RES(0.5)MIQLF 50.353 0.023518999999999998 2056000.0 292.97 314.03 502.48 574.56 479.54 209.67 540.53 432.9 388.17 373.48 362.43 True False 322.712098726885 340.49441018838087 536.5813144577032 610.0492662795643 445.8587647231905 207.962517035867 561.1001649393655 424.26546989651985 371.85656479753646 349.8984090615046 317.85340763306357 1.0152859493626396 1.0712309574527341 1.688140827098332 1.9192786725880178 1.4027182154293558 0.6542717870621138 1.7652796901492116 1.3347834558574263 1.1698995696368788 1.1008169195575668 1.0 8.312217745089617 -9.188154678962421 1.0390599636741455 1.0403904588360289 1.3698471621402892 0.10380259638191092 0.34447479451276836 0.6747860091435894 1.5227149574043441 0.08777262349315107 0.07533674952235725 6.484034560879791e-10 9.188154678962421 0.32945670330426036 S(ph)REYEHVR ddPTM_A549_MK2206_60min_R1 2 SREYEHVR 8 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(1)REYEHVR;S(1)REYEHVR 72.321 0.0015923 27831000.0 2277.1 2367.6000000000004 2246.7 2561.2 2703.2 2008.77 1817.1 2504.79 3137.8 3248.7 3002.7 True False 2661.4188102500725 2488.1007271627645 2565.3158433747117 3188.6941149766385 2305.5628609073883 2221.336708086392 2147.243549076622 2859.8516530976613 2427.0933100369607 2514.8164136798605 2257.046719695899 1.1791598228895572 1.1023700597114785 1.136580745532971 1.41277275616442 1.0214954084858403 0.984178434899957 0.9513509535885588 1.2670768523050249 1.0753403059215243 1.114206627507778 1.0 11.140220566539636 -2.000012402898511 0.03830651987181505 0.6423891983065426 1.8744913809878627 0.05551788363240351 0.1256708466182779 861.4191448702693 2.4471877922824925 21.871897517669595 69.56147529405487 0.009999714416785755 2.000012402898511 1.23210218268132 S(ph)REYEHVR ddPTM_A549_PD325901_60min_R1 2 SREYEHVR 8 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(1)REYEHVR;S(1)REYEHVR 91.656 0.00072631 34341000.0 2997.8 3448.1 3045.3 3174.5 4659.7 3644.5 3336.5 3544.8999999999996 3041.7 3977.3 3234.3 True False 3302.1344491362815 3738.683488108003 3251.972370876541 3370.581655187407 4332.418747092317 3614.8204003301253 3463.4723333028555 3474.1941885797496 2913.867926796678 3726.1725992297343 2836.5016039169413 1.1641574411861235 1.318061475073814 1.1464729532977784 1.188288295177747 1.5273810320112828 1.2743939207855195 1.2210366207867207 1.2248165782040155 1.0272752614604206 1.313650799310052 1.0 11.469896964451761 -8.7149233422194 2.629890429628607 1.0100087767316264 1.2675489764623178 0.06724165915503844 0.13373139140565096 0.14003141714141215 1.92301962149715 0.017517482999834452 0.019296884305947754 1.9278651726909737e-09 8.7149233422194 0.2575401997306914 S(ph)RFTPELQPK ddPTM_A549_MK2206_60min_R1 2 SRFTPELQPK 10 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.5)RFT(0.5)PELQPK;S(0.5)RFT(0.5)PELQPK 81.431 0.0003119 7402300.0 1548.76 1688.6799999999998 1769.37 1536.76 2372.3 1859.32 1750.6599999999999 1696.72 2494.3 2098.5 2480.3999999999996 True False 1810.15282445343 1774.6265990645445 2020.2932718172926 1913.2662689877789 2023.3378125668075 2056.0720082832736 2068.732261089912 1937.2352559870744 1929.3450325786187 1624.4473925284542 1864.4482244425708 0.9708785691780881 0.9518240173148916 1.0835877582072928 1.026183641843851 1.0852207028552596 1.102777744819379 1.1095680931061616 1.0390394490929162 1.03480751424752 0.8712751425500852 1.0 10.864533018819987 -5.744374757437628 24.9997045229779 1.038807618292732 0.9613512378781897 0.18657648502005486 0.06265981990574153 225.85459788896415 330871.9527626022 0.006168819706184085 0.023770394065119774 1.801462568301421e-06 5.744374757437628 -0.07745638041454228 S(ph)RFTPELQPK ddPTM_A549_PD325901_60min_R1 1 SRFTPELQPK 10 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.994)RFT(0.006)PELQPK 113.99 2.7626999999999998e-05 11615000.0 1745.4 2046.0 2069.7 1742.8 2316.4 1909.1 2272.3 2204.2 2342.7 2133.9 2147.1 True False 1922.5917231044305 2218.4236004376253 2210.1622881171556 1850.4487978140228 2153.704055146178 1893.5529225600883 2358.77361995027 2160.2355018385515 2244.2444659587013 1999.165189826347 1883.020311588307 1.0210148617476915 1.1781198464961906 1.1737325797898102 0.9827025159665906 1.1437497736439985 1.0055934664681854 1.2526543688531273 1.147218374939576 1.1918323196767355 1.0616800984690775 1.0 10.878832846626803 -10.992603904434063 1.2927975797183364 1.0005949594096444 1.1298939467452656 0.1344056127775678 0.0829730317195848 0.49088928710018714 1.4709283935311335 0.05489676154626918 0.012806658446251451 1.0171759789333784e-11 10.992603904434063 0.12929898733562117 S(ph)RGEQEGDEEEEGHIVDAEAEEGDADASDAK ddPTM_A549_MK2206_60min_R1 1 SRGEQEGDEEEEGHIVDAEAEEGDADASDAK 31 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 S(0.999)RGEQEGDEEEEGHIVDAEAEEGDADAS(0.001)DAK 42.59 0.021657 2828300.0 0.0 0.0 0.0 0.0 276.43 0.0 133.73 141.67 244.48 269.08 144.96 True False 0.0 0.0 0.0 0.0 235.76751318460674 0.0 158.02700997084185 161.7521563461789 189.10567035433624 208.29464111582388 108.96243130752902 0.0 0.0 0.0 0.0 2.163750481293784 0.0 1.4502889489023598 1.4844763870003905 1.7355125806675125 1.911618881997462 1.0 6.767686989832256 -6.73455051312361 24.671445393551103 1.3167218583161622 7.687419636964843e-07 0.6101631469783902 0.533155034036443 99.24151712029297 91056.84395232827 0.07177416782697904 0.14937598061945578 1.842678153199587e-07 6.73455051312361 -1.3167210895741985 S(ph)RGEYRDYDR ddPTM_A549_MK2206_60min_R1 2 SRGEYRDYDR 10 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 S(1)RGEYRDYDR;S(1)RGEYRDYDR 87.49799999999999 0.00023751 35593000.0 2374.84 2126.26 2372.24 2062.16 2698.92 1613.4299999999998 1673.1000000000001 1760.4699999999998 3251.7799999999997 3173.29 3870.1000000000004 True False 2775.654932736499 2234.47755200925 2708.659303105544 2567.3892925738783 2301.912443237705 1784.1620916918448 1977.080613042814 2010.0220137132605 2515.25702202562 2456.441585054379 2909.047360673758 0.9541456664678144 0.7681131569792413 0.9311155740270236 0.8825532809404832 0.7912942478545844 0.6133149002010814 0.6796316346616327 0.6909554106564026 0.864632544670248 0.8444144355509731 1.0 11.50633106905251 -9.617900527026913 1.1821687213115066 0.9715443246262639 0.7900822527685646 0.13943324981716831 0.10898828280054278 0.34986030048634215 1.0047928897238274 0.03003537546042857 0.02148980421749193 2.4104574686579043e-10 9.617900527026913 -0.18146207185769936 S(ph)RGEYRDYDR ddPTM_A549_PD325901_60min_R1 2 SRGEYRDYDR 10 2 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 S(1)RGEYRDYDR;S(1)RGEYRDYDR 77.185 0.00046623 49785000.0 2046.8200000000002 2030.88 1957.7799999999997 1996.5 1814.3700000000001 2714.3 2012.2599999999998 2687.9 2287.55 2283.98 2894.8999999999996 True False 2254.611659610754 2202.0293849739787 2090.646723887522 2119.8192706195164 1686.934910436699 2692.195640723297 2088.837655450923 2634.2877258832423 2191.4122286694083 2139.769113013535 2538.845652283077 0.8880459738004461 0.867334878350634 0.823463498857243 0.8349539755255512 0.6644495733404311 1.0604014617045816 0.8227509433558986 1.037592704193868 0.8631529950230584 0.8428118153182453 1.0 11.309956974466571 -7.272117037631004 24.99933934080058 0.9408194315740855 0.8200275535215408 0.31522518042805625 0.08946742712937908 658.0692581714989 1540720.1014325072 0.012772686000389735 0.02054369963738691 5.344203195359352e-08 7.272117037631004 -0.12079187805254477 S(ph)RGPKSDDDGFEIVPIEDPAK ddPTM_A549_MK2206_60min_R1 3 SRGPKSDDDGFEIVPIEDPAK 21 2 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 S(0.5)RGPKS(0.5)DDDGFEIVPIEDPAK;S(0.74)RGPKS(0.26)DDDGFEIVPIEDPAK;S(0.656)RGPKS(0.344)DDDGFEIVPIEDPAK 154.71 4.7784e-28 43065700.0 3609.5 4140.799999999999 3266.08 3099.37 4613.8 4398.0 3859.1000000000004 3980.4 5973.0 6079.5 5921.0 True False 4218.695356197636 4351.549033213197 3729.259255676894 3858.7157891360057 3935.1161318639047 4863.393440843877 4560.248517000492 4544.633889463757 4620.125036921015 4706.136727603878 4450.652288713298 0.9478824861012178 0.977732869460186 0.8379129650577665 0.867000057254883 0.8841661573615232 1.092737227120006 1.0246247563677635 1.0211163655693332 1.038078182076253 1.0574038191072532 1.0 12.11980107798337 -7.24576844155394 24.88114485995214 1.023887155506919 0.9014849649756392 0.7091362032175867 0.042790110690661756 364.81773207421526 579230.2637427177 0.006420993303739969 0.0110956109767997 5.678472912449841e-08 7.24576844155394 -0.12240219053127965 S(ph)RGPKSDDDGFEIVPIEDPAK ddPTM_A549_PD325901_60min_R1 1 SRGPKSDDDGFEIVPIEDPAK 21 2 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 S(0.833)RGPKS(0.167)DDDGFEIVPIEDPAK 104.53 1.9066e-10 40304000.0 1725.9 1311.8 1675.9 1531.4 1710.8 1647.8 1756.1 1848.4 1909.6 1693.5 1765.5 True False 1901.1120974595729 1422.3499897625002 1789.6366520053846 1625.991099938257 1590.6393099395955 1634.3808631263496 1822.9293464747932 1811.5322119582506 1829.3461528128792 1586.5721209854821 1548.3546924266027 1.2278272586755454 0.918620259763203 1.1558311934332317 1.0501412291972851 1.027309387002744 1.0555597313202993 1.1773331752674017 1.1699723718466553 1.1814774494246554 1.024682605830441 1.0 10.596520282235875 S(ph)RGPPRPR ddPTM_A549_MK2206_60min_R1 1 SRGPPRPR 8 2 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(1)RGPPRPR 54.416000000000004 0.0075503 35034000.0 712.06 686.59 646.09 635.94 900.27 361.75 519.16 530.43 1124.6 871.45 836.27 True False 832.23831980443 721.534498337 737.7152771825197 791.7453285484319 767.8414755804579 400.0301448897844 613.4846518841117 605.6200768737463 869.8798956171735 674.5888397516899 628.6010791221531 1.3239530561523345 1.147841647590916 1.173582581520136 1.2595354269103565 1.2215083637030264 0.6363815751771059 0.9759522728482242 0.96344103913964 1.3838345566189105 1.0731588954536302 1.0 9.296000938594243 -2.000074755462897 0.829521754840872 1.1234364640359773 60.63503515035335 0.08872056823646024 0.19049104404516992 1442.8681880767047 4.146744415137643 0.03450382068665355 161879.62997668108 0.009998278839991727 2.000074755462897 59.51159868631738 S(ph)RGPPRPR ddPTM_A549_PD325901_60min_R1 1 SRGPPRPR 8 2 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(1)RGPPRPR 46.426 0.013105 51661000.0 631.63 801.26 707.27 690.53 700.28 844.96 603.75 748.1 796.66 654.41 718.8 True False 695.7526126185701 868.7849922222148 755.269595360014 733.1824697925847 651.0947486348493 838.0789259055955 626.7260366346768 733.1785586269028 763.1791506597768 613.0904409176906 630.392156848622 1.103682215998197 1.378165928594887 1.1980948480318407 1.163057728157373 1.0328408143428072 1.3294564610308848 0.99418438162005 1.1630515238198993 1.2106418875434095 0.9725540431571611 1.0 9.300105775098855 -14.673524459128371 0.26021049989588957 1.6629587312166563e-11 1.1976733384392195 0.31997972988491685 0.10657903234307405 35.11633935755111 0.5321789785934883 18.12620096358049 0.048810169425400486 2.120681954563954e-15 14.673524459128371 1.19767333842259 S(ph)RGSPRY(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SRGSPRYSPR 10 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 S(0.47)RGS(0.529)PRY(0.618)S(0.383)PR 42.041000000000004 0.037605 2081900.0 441.96 357.99 329.54 324.73 405.81 265.02 204.38 282.16 575.58 667.23 606.51 True False 516.5520431154196 376.21016190108037 376.273727255843 404.28886457768346 346.1158865732565 293.06424049396156 241.51320046242913 322.1570440787594 445.2120490123886 516.5022795886398 455.896828175562 1.1330459244092388 0.8252089917067925 0.825348420961032 0.8867990290601347 0.7591978385951178 0.6428301808257043 0.5297540705183946 0.7066446269608602 0.9765631640695276 1.1329367691712457 1.0 8.832563561707595 -8.780717803370653 19.58786737849394 0.9889333022514499 0.7798544174220214 0.3377085931476409 0.15028240872564408 18.459009032600154 18754.739614019323 0.026089153402318734 0.027825722409647768 1.6568462021996235e-09 8.780717803370653 -0.2090788848294285 S(ph)RGSTNLFSK ddPTM_A549_MK2206_60min_R1 1 SRGSTNLFSK 10 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 S(0.827)RGS(0.138)T(0.035)NLFSK 82.55 0.00028976 9725100.0 2184.2 2372.2 1462.9 1694.1 2399.3 2469.3 2081.5 2002.7 2914.8 3181.6 2821.1 True False 2552.839561437007 2492.934847514575 1670.3612174624393 2109.154576051038 2046.366148333492 2730.599687011318 2459.6816066275865 2286.588858011523 2254.6024539791356 2462.8743502828343 2120.543011600925 1.203861250383087 1.1756115456637255 0.7877044739598955 0.9946294720325954 0.9650198732769714 1.2876888948127605 1.1599300712936849 1.0783034560026394 1.0632193931671308 1.1614356968045947 1.0 11.050218030503313 -3.1731149196591626 1.4756326808113633 1.0425614148088742 95.47813516222855 0.07297196264232342 0.12762317320436362 1036.0963125315689 5.708485813394664 0.01759326998562137 329613.90695023484 0.0006712512081014071 3.1731149196591626 94.43557374741968 S(ph)RGVSQEKEAQISSAIVSSVQSK ddPTM_A549_PD325901_60min_R1 1 SRGVSQEKEAQISSAIVSSVQSK 23 2 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 S(0.498)RGVS(0.498)QEKEAQIS(0.003)S(0.001)AIVSSVQSK 94.006 1.3202e-07 4504700.0 2686.2 2441.5 2289.4 3143.7 2918.0 2747.5 2148.1 2738.0 3047.0 3159.5 2867.7 True False 2958.9010465240767 2647.253773444996 2444.7724512805817 3337.8792091392816 2713.049746553509 2725.1252709307214 2229.847120985423 2683.3884420805534 2918.9451862279248 2960.008630796357 2514.9910798480696 1.1765055829553175 1.0525897267217807 0.972079969137811 1.3271932596042935 1.0787512402300068 1.0835526586024098 0.8866222782468587 1.0669574391662084 1.1606185046208028 1.176945975878042 1.0 11.296337567761766 -6.981599990333398 24.9881330106521 1.0623682464948845 1.1259824383423336 0.08192046773917594 0.1087692702707439 569.4495227841198 773336.6109065351 0.01590733023731672 0.03005856772243014 1.0432779046814271e-07 6.981599990333398 0.0636141918474491 S(ph)RIESPERTDVYVEQK ddPTM_A549_MK2206_60min_R1 1 SRIESPERTDVYVEQK 16 2 A0A0C4DFQ2;Q8NCN2 A0A0C4DFQ2 ZBTB34 Zinc finger and BTB domain-containing protein 34 1 S(0.558)RIES(0.43)PERT(0.012)DVYVEQK 68.567 0.00039623 3862200.0 750.43 703.14 475.76 554.56 795.78 574.36 510.41 638.58 736.65 818.51 710.74 True False 877.0842377479958 738.9268226462349 543.2299219495051 690.4272248951444 678.721816163392 635.1383939706881 603.1448901459463 729.1006705692312 569.7999511883252 633.608022520117 534.2436425739047 1.6417307906975498 1.3831270299936518 1.016820563988943 1.2923452332886376 1.2704349889750925 1.1888553149845411 1.128969709850146 1.3647343879592744 1.066554481477993 1.1859907578263165 1.0 9.061354024888782 -2.0000000000000004 0.17513867866371557 0.9786724764718518 3.0583041371317234 0.37242131186909055 0.1424223699349805 31.0512086038732 0.3208790320748034 0.15288510593663604 17.239810447335493 0.00999999999999999 2.0000000000000004 2.0796316606598717 S(ph)RKESYSVYVYK ddPTM_A549_PD325901_60min_R1 1 SRKESYSVYVYK 12 2 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053 P62807 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S 1 S(0.524)RKES(0.409)Y(0.013)S(0.052)VY(0.002)VYK 46.408 0.012501 4964900.0 3492.6 3279.2 3990.1 3790.1 4573.2 3794.3 3223.6 4330.6 4014.0 4047.2 4194.2 True False 3847.166180883774 3555.5496923533988 4260.892180420477 4024.2058690583694 4251.994208683518 3763.4004787961544 3346.2758620216055 4244.222785710023 3845.3055390610075 3791.6591013005263 3678.339989224387 1.0458973863628591 0.9666180132258846 1.1583736666275177 1.0940277083812777 1.1559546483303984 1.0231246947864934 0.909724460442603 1.1538418955679401 1.0453915489937695 1.0308071337636284 1.0 11.844839118979303 S(ph)RKS(ph)PSPAGGGSS(ph)PYSR ddPTM_A549_PD325901_60min_R1 1 SRKSPSPAGGGSSPYSR 17 2 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 3 S(0.657)RKS(0.692)PS(0.627)PAGGGS(0.296)S(0.674)PY(0.015)S(0.039)R 43.768 0.01763 30320000.0 8010.9 7587.6 7915.8 7574.3 8378.5 8240.9 8070.3 9226.0 9428.5 10043.0 9241.7 True False 8824.16067068711 8227.033680684515 8453.013789572296 8042.147308516612 7790.023064255846 8173.788842661685 8377.419682737609 9041.98019234301 9032.252933491955 9408.883266050903 8105.029487963141 1.0887265350227235 1.0150528993019166 1.0429343658929249 0.9922415853588298 0.9611344506303013 1.0084835415837363 1.033607551357956 1.115601146889267 1.1144009959378731 1.160869714295812 1.0 12.984601719271135 -8.008045364826591 22.9194637923732 1.0608388106679598 1.0157989230336526 0.25465893362339675 0.05154641036149631 201.44822495761534 573886.8102364347 0.00848867827458531 0.011435692636516923 9.816453985460146e-09 8.008045364826591 -0.04503988763430722 S(ph)RLFSDEDDRQINTR ddPTM_A549_MK2206_60min_R1 2 SRLFSDEDDRQINTR 15 2 H0Y322;Q5TKA1;Q5TKA1-2;B1B047 H0Y322 LIN9 Protein lin-9 homolog 1 S(0.54)RLFS(0.46)DEDDRQINTR;S(0.571)RLFS(0.428)DEDDRQINT(0.001)R 65.95100000000001 0.00072771 6855300.0 1360.94 1563.0 1661.75 1472.07 2141.1099999999997 1354.8300000000002 1394.52 1300.91 2482.5 2348.77 2228.61 True False 1590.633400211556 1642.5500238872264 1897.4111375474815 1832.727216083733 1826.1555553112655 1498.1972113366319 1647.8862330407412 1485.3179763697865 1920.2177137378922 1818.1812257083895 1675.1846304930482 0.9495272170348132 0.9805188001299794 1.132657919019366 1.0940449086763149 1.0901219615259858 0.8943475149337273 0.983704245516942 0.8866592668848811 1.146272284728833 1.085361692444166 1.0 10.710104395645894 -5.542017359493018 23.9847122290074 1.0474123210028148 0.9572750193638412 0.08174680001873647 0.08427014223904093 209.6467477875206 262731.73947178316 0.01278371384598886 0.049528497483739546 2.8706658343095836e-06 5.542017359493018 -0.0901373016389736 S(ph)RLSAIEIDIPVVSHTT ddPTM_A549_MK2206_60min_R1 3 SRLSAIEIDIPVVSHTT 17 1 P56749 P56749 CLDN12 Claudin-12 1 S(0.5)RLS(0.5)AIEIDIPVVSHTT;S(0.5)RLS(0.5)AIEIDIPVVSHTT;S(0.894)RLS(0.106)AIEIDIPVVSHTT 76.155 0.00012497 8640800.0 579.73 702.78 338.43 656.97 790.9100000000001 605.1999999999999 518.5 617.49 1104.32 765.75 492.99 True False 677.5742509623099 738.5485001839187 386.4244629337712 817.9276794925038 674.5681867121418 669.2418623007529 612.70473842729 705.0210984838147 854.1932832366675 592.766543163528 370.56697716817547 1.8284798503640123 1.9930229774595947 1.0427924956691408 2.2072330506700855 1.8203677830850011 1.8059943371506333 1.6534250922991025 1.9025470209771362 2.3050982301885106 1.5996205266140353 1.0 8.533590512050768 -11.003122398688589 1.2912799449814067 1.001348047151136 1.877220324226294 0.19460116331132626 0.3535914572307199 0.29969002594568467 0.891801660804859 0.22826761897496303 0.05231091981517114 9.928361945905662e-12 11.003122398688589 0.8758722770751579 S(ph)RLSAIEIDIPVVSHTT ddPTM_A549_PD325901_60min_R1 3 SRLSAIEIDIPVVSHTT 17 1 P56749 P56749 CLDN12 Claudin-12 1 S(0.5)RLS(0.5)AIEIDIPVVSHTT;S(0.576)RLS(0.424)AIEIDIPVVSHTT;S(0.5)RLS(0.5)AIEIDIPVVSHTT 113.59 1.5689e-09 22548800.0 1808.99 1804.58 1779.8600000000001 1293.19 1615.97 1809.51 1489.55 1763.9099999999999 1877.35 1835.17 2183.77 True False 1992.6373330919484 1956.6582897740602 1900.6520027676486 1373.0674092524189 1502.4698419938568 1794.7739505011286 1546.2356403630354 1728.7274312893749 1798.4515081604834 1719.2970530079292 1915.1801340585905 1.0404438191770573 1.0216575741246703 0.9924142220188163 0.7169390413123474 0.7845057575915165 0.9371306221194448 0.8073578108218471 0.9026448220439239 0.9390508371394082 0.8977208057001135 1.0 10.903264377225417 -9.441762690588225 1.0976874704880635 0.9862298605918514 0.897011011282264 0.007923085290103216 0.09943797815736244 0.6925762520614361 1.7423350788202174 0.027092067044172427 0.020741951678949055 3.6160740002977975e-10 9.441762690588225 -0.08921884930958734 S(ph)RLSLQENQLPK ddPTM_A549_MK2206_60min_R1 4 SRLSLQENQLPK 12 1 Q5RGS4 Q5RGS4 PLEKHA1 1 S(0.981)RLS(0.019)LQENQLPK;S(0.984)RLS(0.016)LQENQLPK;S(0.563)RLS(0.437)LQENQLPK;S(0.714)RLS(0.286)LQENQLPK 107.63 3.5507e-05 51962600.0 7709.71 8299.7 8464.0 7519.3 9556.3 7693.0 6722.300000000001 7395.1 10843.300000000001 10090.9 9976.499999999998 True False 9010.920563687623 8722.119279115046 9664.322472214162 9361.528837554208 8150.580929154061 8507.068153799893 7943.654895139383 8443.37807154392 8387.309863191978 7811.358681565585 7499.059712607361 1.2016067225786367 1.1630950563643982 1.2887379008286304 1.2483603540075403 1.0868803878773452 1.1344179776963073 1.0592867905538308 1.125924901937903 1.1184482034582681 1.0416450836407116 1.0 12.872493995870364 -7.843760151231432 0.023835823649598915 1.634188696451233e-07 2.2728634704962727 0.6180710008014844 0.051716484543312465 111.86291026431589 1.35765869821313 61.84141279314309 67.2832568756996 1.4329790752863154e-08 7.843760151231432 2.272863307077403 S(ph)RLSLQENQLPK ddPTM_A549_PD325901_60min_R1 2 SRLSLQENQLPK 12 1 Q5RGS4 Q5RGS4 PLEKHA1 1 S(0.993)RLS(0.007)LQENQLPK;S(0.986)RLS(0.014)LQENQLPK 159.4 1.8028e-14 71982000.0 9287.6 8337.3 10397.7 10172.0 11019.0 10305.1 10685.3 11101.8 9664.1 11365.5 11547.400000000001 True False 10230.470314830245 9039.913530756892 11103.350448449413 10800.301337711868 10245.06345348633 10221.17868224502 11091.934938720515 10880.365889806379 9257.951484813022 10647.88039035164 10127.143004999689 1.010203006887485 0.8926420340163025 1.0963951474732587 1.066470704756499 1.0116439995394975 1.0092855089731532 1.0952679283036209 1.0743766415103282 0.914172089822613 1.051419969590127 1.0 13.305939608588186 -8.76034017463081 24.999998329305896 0.9594701543883537 1.0313520065819408 0.03483620992470193 0.06332652416302516 33.344494924234525 758379.2857704569 0.010630701982228999 0.011725703472715303 1.7364401752760838e-09 8.76034017463081 0.07188185219358711 S(ph)RLSPAGEMKPMPLSEGK ddPTM_A549_MK2206_60min_R1 2 SRLSPAGEMKPMPLSEGK 18 2 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.5)RLS(0.5)PAGEMKPMPLSEGK;S(0.5)RLS(0.5)PAGEMKPMPLSEGK 62.19 0.00060069 12904000.0 3147.2 3660.8999999999996 3400.5 2889.0 4030.1 3588.7 3260.7 3014.2 5034.9 4684.299999999999 5103.299999999999 True False 3678.370418347474 3847.224173031828 3882.7420329352854 3596.8051296921362 3437.2776286411886 3968.453852013738 3853.126982815551 3441.4720806003565 3894.5031890831433 3626.1133766123594 3836.009766085217 0.9589053841490556 1.0029234563075828 1.0121825203009742 0.9376423286228498 0.8960554947046059 1.0345265246974813 1.0044622453471495 0.8971489361228868 1.0152485073200481 0.9452826238012777 1.0 11.90539067797558 S(ph)RLSPAGEMKPMPLSEGK ddPTM_A549_PD325901_60min_R1 5 SRLSPAGEMKPMPLSEGK 18 2 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.5)RLS(0.5)PAGEMKPMPLSEGK;S(0.5)RLS(0.5)PAGEMKPMPLSEGK;S(0.5)RLS(0.5)PAGEMKPMPLSEGK;S(0.55)RLS(0.449)PAGEMKPMPLS(0.001)EGK;S(0.5)RLS(0.5)PAGEMKPMPLS(0.001)EGK 84.762 1.9275e-05 27183000.0 8674.5 7721.299999999999 8806.3 9079.6 10909.6 9815.0 9696.2 9568.2 10287.300000000001 9972.5 10208.599999999999 True False 9555.128854170618 8372.001048904705 9403.948474583813 9640.426270732263 10143.347332076817 9735.069894152875 10065.194196964236 9377.354744892313 9854.960556049406 9342.834648082498 8953.006917647243 1.067253598937418 0.9351049458481576 1.050367609573463 1.076780835691085 1.1329542605494136 1.0873519906439602 1.1242249994384306 1.0473972410775914 1.100743096336084 1.0435415424137413 1.0 13.128156585655148 -5.977145143840395 24.553097552691543 1.0644582916665546 0.9990684607232426 0.25158398796782144 0.046593323970648276 235.98418403267848 253515.37548734952 0.007404461754759491 0.023019467758695754 1.0540345727961958e-06 5.977145143840395 -0.06538983094331197 S(ph)RLSSSSSNDSGNK ddPTM_A549_PD325901_60min_R1 2 SRLSSSSSNDSGNK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.531)RLS(0.384)S(0.069)S(0.016)SSNDSGNK;S(0.829)RLS(0.153)S(0.012)S(0.003)S(0.003)SNDSGNK 88.897 2.0827e-05 52505000.0 7576.8 7263.6 7423.1 6677.0 8226.3 7249.9 7566.2 5890.200000000001 5493.8 4981.7 6002.299999999999 True False 8345.99115825464 7875.729063606422 7926.876204726515 7089.423125432769 7648.513067194355 7190.859218096686 7854.135881383508 5772.71534022749 5262.914691204125 4667.154611817761 5264.055151714641 1.585468031340084 1.4961334630092333 1.50584976339857 1.3467607996324957 1.4529697821845642 1.366030372184538 1.4920314576919296 1.0966289626253563 0.9997833494373355 0.8866082283156829 1.0 12.361958888987596 -8.354710723104175 3.4991051001187086 1.0012444761836774 1.4590310185603923 0.9078232130849444 0.07214151936001997 0.046148645139085356 1.072078518758554 0.010611636052208008 0.013006793866408477 4.418646686354341e-09 8.354710723104175 0.4577865423767149 S(ph)RLTPVSPESSSTEEK ddPTM_A549_MK2206_60min_R1 4 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.499)RLT(0.499)PVS(0.001)PESSSTEEK;S(0.5)RLT(0.5)PVSPESSSTEEK;S(0.496)RLT(0.496)PVS(0.009)PESSSTEEK;S(0.492)RLT(0.492)PVS(0.015)PESSSTEEK 119.38 3.2404000000000003e-08 26832300.0 4675.25 4910.1900000000005 4832.900000000001 4421.7699999999995 5958.200000000001 5081.6 4822.63 4228.93 6462.4 7061.599999999999 7590.099999999999 True False 5464.317901111788 5160.097697882803 5518.277891772665 5505.103848500797 5081.756672779812 5619.33153910692 5698.839445866154 4828.393778054962 4998.676718332224 5466.379655505803 5705.268693896773 0.9577669684439679 0.904444290836439 0.967224891209043 0.964915789924127 0.8907129436718793 0.9849372291822497 0.9988731033759205 0.8463043613038156 0.8761509731661845 0.9581283457084989 1.0 12.47807911757816 S(ph)RLTPVSPESSSTEEK ddPTM_A549_PD325901_60min_R1 2 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.706)RLT(0.294)PVSPESSSTEEK;S(0.498)RLT(0.498)PVS(0.004)PESSSTEEK 103.4 2.9441e-07 17118000.0 3083.4100000000003 3919.1000000000004 3122.56 3074.9 3899.3 3185.6000000000004 3404.41 3757.33 3479.6 3749.0 3412.9900000000002 True False 3396.4355133135314 4249.376311082647 3334.475699078664 3264.8295893954196 3625.426619854727 3159.6575297823138 3533.966685514631 3682.387105581636 3333.3645126349484 3512.287500191659 2993.2138667261784 1.1347119399217456 1.4196701272570253 1.1140118439734947 1.0907438408222798 1.2112153629102453 1.0556070065378198 1.1806595996362599 1.2302452379085227 1.1136406087416697 1.173416821041664 1.0 11.547479648510521 -14.99999999994509 0.08203138449309884 0.38662540216638397 1.3490126907491373 0.003142623171338732 0.10500650070291709 112.33891152069883 0.6796203305175958 12.270244441982893 1.1958286841865642 1.0000000001264367e-15 14.99999999994509 0.9623872885827534 S(ph)RLTVADIR ddPTM_A549_PD325901_60min_R1 1 SRLTVADIR 9 1 P11413;P11413-2;P11413-3;E7EUI8;E7EM57;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 S(0.725)RLT(0.275)VADIR 42.843 0.020599 2881300.0 509.1 394.2 378.57 568.77 592.08 529.97 538.5 631.98 761.64 512.28 609.41 True False 560.7834572203884 427.4206174450205 404.26203672634296 603.9016311296082 550.4943433651138 525.6541000309937 558.9929121785067 619.3746631212807 729.6309194744459 479.93455337374803 534.4564333682787 1.0492594385779777 0.7997295771169007 0.7563984854267392 1.1299361246784296 1.030007890251709 0.9835303070788943 1.0459092215535566 1.1588870943471032 1.3651831541742863 0.8979862967484177 1.0 9.06192854010546 -7.180514636282415 0.8417615059268422 1.1693784320173755 0.8885465435182313 0.12693625694819333 0.15086826919157834 0.5548661849027384 0.7649103784704278 0.029108575299629087 0.07742192744975573 6.599109940398543e-08 7.180514636282415 -0.2808318884991442 S(ph)RLVLYPETSR ddPTM_A549_MK2206_60min_R1 1 SRLVLYPETSR 11 1 Q9NXH8 Q9NXH8 TOR4A Torsin-4A 1 S(0.997)RLVLY(0.003)PETSR 47.201 0.0090946 1233300.0 335.96 208.88 204.73 337.83 274.86 270.41 189.06 234.83 323.66 453.85 349.25 True False 392.66183456660417 219.51109980138457 233.76379250193824 420.5983651657648 234.4284581048402 299.0246067163694 223.40975476772118 268.1178716367133 250.35152677881402 351.3249697874855 262.5215861903596 1.4957316092166124 0.8361640007851115 0.8904555084183877 1.6021477367608947 0.8929873596560227 1.1390476914897991 0.8510147984772664 1.0213174296543208 0.9536416810969562 1.3382707871219885 1.0 8.036292244970209 S(ph)RNSLPNQVAFPEGEEQDAVSGGK ddPTM_A549_MK2206_60min_R1 1 SRNSLPNQVAFPEGEEQDAVSGGK 24 1 Q96RV3-4 Q96RV3-4 PCNX Pecanex-like protein 1 1 S(0.5)RNS(0.5)LPNQVAFPEGEEQDAVSGGK 53.482 0.0016439 2124200.0 1305.2 1333.1 1293.7 1256.1 1573.6 1178.7 1277.5 1273.8 1929.9 1706.5 2220.5 True False 1525.4858509237158 1400.949095869521 1477.1661132211084 1563.8445563884711 1342.125524535316 1303.4292516422636 1509.6052137721554 1454.3650508488943 1492.7807314170225 1321.0004647842766 1669.0885673176617 0.9139633934317067 0.8393497644771127 0.8850136188968176 0.9369452208888323 0.804106834601475 0.7809227605800227 0.9044488371268357 0.8713528325139495 0.8943687954294853 0.7914501906314138 1.0 10.704844795527858 -10.116839015847221 0.6006921006471706 1.0025603735375108 0.8635530067874082 0.0 0.07502734677104227 0.4766217742416952 0.32533754339837256 0.03204701380373372 0.010450155406799874 7.64118974488058e-11 10.116839015847221 -0.1390073667501026 S(ph)RNSPLLER ddPTM_A549_PD325901_60min_R1 1 SRNSPLLER 9 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.639)RNS(0.361)PLLER 76.357 0.00055745 18200000.0 1493.9 1382.2 1528.2 1655.8 1647.9 1830.7 1457.0 1339.9 1606.9 1549.6 2001.0 True False 1645.5596282489462 1498.6828448313229 1631.912841813132 1758.0750054053576 1532.1571889463767 1815.7913861666495 1512.4469323009923 1313.174643368785 1539.3675811452758 1451.7579915436093 1754.8896853841013 0.9376997551209463 0.8540040193485432 0.9299233196278929 1.001815111256158 0.8730789186962632 1.034704005208862 0.8618472972390602 0.7482946958465734 0.8771876625443535 0.8272645304344904 1.0 10.777164628382016 -10.774246045948574 1.1553027264505442 0.9972098847176846 0.900985050704578 0.0 0.08866289092920977 0.6210780178179713 1.5348821807417832 0.044581901156353985 0.012686237707463249 1.6817210259837627e-11 10.774246045948574 -0.09622483401310655 S(ph)RNTDEMVELR ddPTM_A549_MK2206_60min_R1 5 SRNTDEMVELR 11 1 P61978-3;P61978;P61978-2;Q5T6W2;S4R457 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 S(0.5)RNT(0.5)DEMVELR;S(0.5)RNT(0.5)DEMVELR;S(0.772)RNT(0.228)DEMVELR;S(0.5)RNT(0.5)DEMVELR;S(0.5)RNT(0.5)DEMVELR 110.44 2.33e-05 40241800.0 2304.0699999999997 1749.9899999999998 1734.1299999999999 1816.79 2785.94 2118.9 1684.2 1688.0300000000002 3435.36 3089.37 2907.9100000000003 True False 2692.9406868968786 1839.0570161883613 1980.055709917384 2261.9036315588023 2376.1319165124023 2343.120591588015 1990.1973393620856 1927.3134218750658 2657.256445142639 2391.47917133935 2185.7956927668097 1.2320184799559732 0.8413672980846888 0.9058741018063783 1.0348193287432341 1.0870786891819073 1.0719760311276216 0.9105138901810474 0.8817445419317514 1.2156929643223189 1.094100047526484 1.0 11.093942842667762 -8.760181934630612 24.99999986952424 1.1018550050956524 0.9915935567832178 0.14575809578747734 0.11568041868980056 50.43556468043081 1002732.9941074605 0.02165591385834499 0.02390034803024243 1.7370729817466683e-09 8.760181934630612 -0.11026144831243456 S(ph)RNTDEMVELR ddPTM_A549_PD325901_60min_R1 5 SRNTDEMVELR 11 1 P61978-3;P61978;P61978-2;Q5T6W2;S4R457 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 S(0.5)RNT(0.5)DEMVELR;S(0.5)RNT(0.5)DEMVELR;S(0.5)RNT(0.5)DEMVELR;S(0.856)RNT(0.144)DEMVELR;S(0.972)RNT(0.028)DEMVELR 121.76 2.7035e-06 51946300.0 2322.5 2144.0099999999998 2225.72 2007.31 2540.29 2523.44 2411.92 1958.9389999999999 2311.8 2585.97 2553.9700000000003 True False 2558.278490265865 2324.693247103749 2376.770743541633 2131.2969797682263 2361.868793924747 2502.8899412838664 2503.7069354532678 1919.8664248870834 2214.643085501055 2422.691412875599 2239.8478809497433 1.142166176562446 1.0378799680440929 1.0611304293280093 0.9515364850868849 1.054477321434554 1.1174374664330273 1.1178022207435099 0.8571414341196327 0.9887470949866466 1.0816321204136086 1.0 11.129185039779069 -8.206566087839404 24.99975603913598 0.9842213667918184 1.064221209924 0.27183541333062167 0.06821236072961104 305.8765391921369 139354.60616188656 0.009889898862635102 0.01276779944419047 6.214896666877274e-09 8.206566087839404 0.07999984313218167 S(ph)RPDSPRVK ddPTM_A549_MK2206_60min_R1 1 SRPDSPRVK 9 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(0.561)RPDS(0.439)PRVK 43.628 0.013506 5495600.0 976.85 1201.3 987.69 1131.5 957.05 456.57 625.28 482.23 862.72 1669.6 1818.7 True False 1141.7183983104753 1262.4410388328379 1127.759293783224 1408.7175507949653 816.269212796469 504.88393435336224 738.8852822445824 550.5875792674376 667.3152974807465 1292.4362004124403 1367.0665964335199 0.83515931212792 0.9234671098879638 0.824948321263489 1.0304673923495071 0.5970954267524332 0.36931919459559015 0.5404896031928714 0.4027511027654698 0.48813664178590577 0.9454083683883583 1.0 10.416867809979228 -6.770489262746317 24.996175164928967 0.6697689462247166 0.8993244252636695 0.3033929145663772 0.19748728810745 277.5605053188411 766635.8884582745 0.03651463672840762 0.06971407834286872 1.6963315408931777e-07 6.770489262746317 0.2295554790389529 S(ph)RPETGRPR ddPTM_A549_PD325901_60min_R1 1 SRPETGRPR 9 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 S(1)RPETGRPR 48.283 0.010718 7348200.0 554.0 448.65 413.65 708.37 391.64 643.26 323.07 581.61 404.28 527.68 489.72 True False 610.2416721667556 486.45931003731204 441.72277647951984 752.1244060750054 364.1325574846526 638.0215038321733 335.3646056406875 570.0093322857813 387.2895175215705 494.3621947455679 429.4875445908555 1.420859998974109 1.1326505649907257 1.0284879783890357 1.7512135463474376 0.8478303086333683 1.4855413430905762 0.7808482687435494 1.3271847797793335 0.9017479607948018 1.1510512958333032 1.0 8.746472482680806 -7.951512630529421 0.9204604807700619 0.9601401717222067 1.2691046829127444 0.08675541013706611 0.27376231752560176 0.5955999912733646 1.0113368675715568 0.046888731364412545 0.07360003527401622 1.118117306052484e-08 7.951512630529421 0.3089645111905377 S(ph)RPETGRPRPK ddPTM_A549_PD325901_60min_R1 1 SRPETGRPRPK 11 3 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 S(0.998)RPET(0.002)GRPRPK 40.496 0.029278 13459000.0 1023.1 971.37 1113.4 1193.4 1144.3 1208.5 1284.3 1231.9 1065.6 1346.2 1210.0 True False 1126.9643588335873 1053.230758923311 1188.962019418101 1267.1136075919524 1063.928315620692 1198.6583766768974 1333.174739295926 1207.328788093145 1020.8165377238191 1261.2007022560706 1061.17767082197 1.061994037210244 0.9925112333993011 1.1204174872028276 1.1940635790145 1.00259206810919 1.1295548423558868 1.2563162380370025 1.1377253981964857 0.9619657158193992 1.188491557006817 1.0 10.051450508638231 -8.762756894104296 24.999986170837104 0.9820393598535074 1.1126993418757438 0.0 0.09568120001813989 26.675368332178316 506167.79224856955 0.013010450377956203 0.014221634117714757 1.726804238180011e-09 8.762756894104296 0.1306599820222364 S(ph)RPRSQYNTK ddPTM_A549_MK2206_60min_R1 1 SRPRSQYNTK 10 2 Q7Z6B7 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 S(0.812)RPRS(0.188)QYNTK 73.881 0.00033989 9632900.0 1358.8 1415.5 1622.2 1208.5 1969.5 1239.0 1384.6 1210.1 2500.5 2380.9 2186.9 True False 1588.1322205295326 1487.542903910666 1852.2523528385877 1504.5825542516257 1679.7891589808733 1370.1101576183635 1636.1638974473005 1381.6353807758253 1934.1407424779854 1843.0530363931355 1643.832374630486 0.9661156727653122 0.9049237178121936 1.1267890701172936 0.9152895255453514 1.021873753617044 0.8334853229340662 0.9953350005137177 0.8404965141816243 1.1766046053891337 1.1211928082432565 1.0 10.682847476249199 -8.766834798409715 24.99995457777306 1.0833966124974874 0.9536874048886608 0.3589832005184691 0.08774285665377109 125.6052671485883 581997.6789707539 0.016297203848253873 0.017594479419168776 1.7106659127785347e-09 8.766834798409715 -0.12970920760882665 S(ph)RPRSQYNTK ddPTM_A549_PD325901_60min_R1 1 SRPRSQYNTK 10 2 Q7Z6B7 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 S(0.889)RPRS(0.111)QYNTK 63.727 0.0013146 14469000.0 1308.3 1182.2 1409.4 1195.2 1312.2 1464.4 1247.4 1804.4 1196.9 1801.3 1847.8 True False 1441.117652880445 1281.8281429312615 1505.050359410698 1269.024789503855 1220.0355988442473 1452.4744119202735 1294.8704896034722 1768.4098264755846 1146.598455331868 1687.565610588218 1620.5323141692868 0.8892865882894702 0.790992028806503 0.9287382585654969 0.7830913203075368 0.7528610125060412 0.8962946306102123 0.799040215540068 1.0912524304596187 0.7075443329987743 1.0413649859572802 1.0 10.662252073615878 S(ph)RPTSFADELAAR ddPTM_A549_MK2206_60min_R1 4 SRPTSFADELAAR 13 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 S(0.968)RPT(0.027)S(0.005)FADELAAR;S(0.979)RPT(0.018)S(0.003)FADELAAR;S(0.958)RPT(0.021)S(0.021)FADELAAR;S(0.654)RPT(0.144)S(0.202)FADELAAR 127.75 1.5115e-08 40438500.0 3338.1099999999997 3244.9700000000003 2989.4100000000003 2446.41 3656.12 2575.59 2591.4 2749.25 3175.2999999999997 3115.81 3415.25 True False 3901.501359046097 3410.125112612501 3413.353289421283 3045.7805598235186 3118.3095912328777 2848.1372242617254 3062.22383637508 3138.9646067250133 2456.0996199121546 2411.946356975973 2567.1491688951346 1.5197797643855846 1.3283704561975929 1.3296279510280047 1.1864447133527423 1.2146974663630299 1.1094552894592893 1.1928499806238444 1.2227433624653685 0.9567420739205528 0.9395427372122832 1.0 11.32595141344363 -2.0000005301975454 0.19323956401102976 0.9373177871058042 3.5158530033504634 0.8354478917482054 0.06788853867590106 14.324579990411161 0.1564136847848566 0.06674924139563955 11.205490232473084 0.009999987791757807 2.0000005301975454 2.578535216244659 S(ph)RPTSFADELAAR ddPTM_A549_PD325901_60min_R1 2 SRPTSFADELAAR 13 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 S(0.96)RPT(0.035)S(0.005)FADELAAR;S(0.9)RPT(0.054)S(0.046)FADELAAR 94.20299999999999 4.8318999999999996e-05 37176000.0 1498.1599999999999 1950.26 1685.56 1637.08 1777.8 1624.04 1798.88 2060.15 1880.51 2538.4 2613.9700000000003 True False 1650.2521003128984 2114.6152546380654 1799.952237695682 1738.1987135215627 1652.9334610770486 1610.8143566887452 1867.337362784907 2019.0586920935914 1801.47870434968 2378.124990793946 2292.46826132108 0.7198582105393722 0.922418552228713 0.7851590654774973 0.7582214955158819 0.7210278497485122 0.7026550307660451 0.8145532020185167 0.8807357232200324 0.7858249271078425 1.037364412375116 1.0 11.16268604485029 -10.853464011862888 0.4989377076302973 1.0554593490352402 0.7808777905970395 0.6621461206664263 0.06381526459290676 0.9329860776488216 0.2863209353377097 0.12687348178649616 0.015575587205319274 1.4013157012027274e-11 10.853464011862888 -0.27458155843820065 S(ph)RQT(ph)PSPDVVLR ddPTM_A549_MK2206_60min_R1 1 SRQTPSPDVVLR 12 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 2 S(0.788)RQT(0.932)PS(0.28)PDVVLR 65.22399999999999 0.012490000000000001 7535000.0 1076.4 910.15 1010.0 760.69 1179.7 999.65 770.36 927.51 1639.4 1274.2 1716.6 True False 1258.0700045466508 956.4727474350358 1153.2331872561792 947.0590841486719 1006.1676927391409 1105.4322994860347 910.3244402986447 1058.987382880246 1268.078517583847 986.3573350296671 1290.3208442501675 0.9750055655946112 0.7412673767901984 0.8937569228576999 0.7339717779255344 0.7797810112289134 0.8567111849831618 0.7055023906303345 0.8207163261751738 0.9827621736365533 0.7644279633433807 1.0 10.333514127717722 -8.757818018105295 5.220633993424827 0.9924637377580007 0.8069706062263757 0.044365829408800184 0.10045128860526889 0.0842161508266581 6.605195258388529 0.011481874114252697 0.012606435819308023 1.7465538559702804e-09 8.757818018105295 -0.18549313153162494 S(ph)RQTPS(ph)PDVVLR ddPTM_A549_PD325901_60min_R1 2 SRQTPSPDVVLR 12 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 2 S(0.536)RQT(0.525)PS(0.939)PDVVLR;S(0.588)RQT(0.43)PS(0.982)PDVVLR 95.428 0.00081815 38021000.0 1938.47 1815.1 1970.48 2050.2599999999998 1867.564 1837.27 1470.15 1781.4 1970.0100000000002 2187.77 2267.35 True False 2135.2620473738084 1968.0648470940032 2104.208622258827 2176.899903721698 1736.3927473860376 1822.3078822649268 1526.0973627469486 1745.868579518734 1887.2173305943136 2049.633828832837 1988.480323915862 1.0738160301072996 0.9897331260579662 1.0581993681059232 1.094755566620235 0.8732260141084046 0.9164324435840048 0.7674691795499616 0.8779913778983947 0.9490751846504903 1.0307538898833795 1.0 10.957450571356656 -6.753893205933287 24.999959696189688 0.9413577562538588 1.0498174852629054 0.43354502087472313 0.07216247760583326 172.84400625290894 572615.7394150735 0.011398948880994636 0.023365717611069977 1.7624093738720082e-07 6.753893205933287 0.10845972900904666 S(ph)RRSPLLK ddPTM_A549_MK2206_60min_R1 1 SRRSPLLK 8 2 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 S(0.987)RRS(0.013)PLLK 51.268 0.0097068 35338000.0 2558.9 2980.6 2867.1 2904.6 3001.4 2452.3 2703.6 2777.4 4217.1 4119.8 4219.8 True False 2990.7797609015474 3132.299808828066 3273.6978922595945 3616.2271303924467 2559.8980359305374 2711.800758295004 3194.8091240347576 3171.1049554307706 3261.9335833248992 3189.134318674636 3171.9071994447495 0.942896362612718 0.9875130676510281 1.0320913212191907 1.140079738469485 0.8070532569107489 0.8549432842075934 1.0072202379041912 0.9997470783463906 1.0283824141815716 1.0054311548688757 1.0 11.631134847362446 -7.962636385848577 24.99980400605329 1.0123118391798553 0.9634430156346983 0.07548426754117465 0.0818866534959544 378.57665160056376 253303.1093429495 0.01325955311147598 0.01832068257387463 1.0898421845753312e-08 7.962636385848577 -0.04886882354515709 S(ph)RRSPLLK ddPTM_A549_PD325901_60min_R1 4 SRRSPLLK 8 2 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 S(0.702)RRS(0.298)PLLK;S(0.721)RRS(0.279)PLLK;S(0.923)RRS(0.077)PLLK;S(0.612)RRS(0.388)PLLK 44.318000000000005 0.019916 106730000.0 18868.4 17375.0 17488.7 19384.899999999998 21697.9 21057.1 20941.2 21770.8 19995.600000000002 20413.3 22876.0 True False 20783.90607781808 18839.252227567795 18675.588350096397 20582.26124669786 20173.91435769135 20885.617959059262 21738.128825464344 21336.564315137784 19155.254468572064 19124.400754244423 20062.397022911886 1.0359632527500182 0.9390329682964991 0.9308752253665546 1.0259123684568834 1.0055585249684824 1.0410330298621462 1.0835260014363548 1.063510222171895 0.9547839396606579 0.9532460519250895 1.0 14.292206366679562 -4.910334289562225 18.69053435023743 0.993634342114194 3.042991265595193 0.029969638580203628 0.049077811934945384 552.5203734072265 119915.59155469657 0.007035136921056214 1965.8632231095507 1.2293221601953422e-05 4.910334289562225 2.049356923480999 S(ph)RS(ph)FDYNYR ddPTM_A549_MK2206_60min_R1 4 SRSFDYNYR 9 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 2 S(0.905)RS(0.827)FDY(0.233)NY(0.035)R;S(0.836)RS(0.887)FDY(0.235)NY(0.042)R;S(0.997)RS(0.997)FDY(0.005)NYR;S(0.996)RS(0.996)FDY(0.008)NYR 80.737 0.00078422 253519000.0 20789.11 19024.37 14205.14 9998.02 40685.700000000004 31320.32 24422.29 29326.18 45532.399999999994 28241.28 28599.61 True False 24297.803523059116 19992.62917334579 16219.64245308934 12447.535348828167 34700.8874260209 34634.61547365419 28859.503965757798 33483.25582265959 35219.38410030177 21861.555233579213 21497.537527918877 1.1302598491340476 0.9299962447969373 0.7544883888224347 0.5790214499061829 1.6141796417824512 1.6110968723126624 1.342456266364365 1.5575391264778509 1.6382985285901848 1.0169329954739041 1.0 14.39188379286553 -6.763225906531809 24.999999558169783 1.372620799036939 0.8475558852067334 0.5383341792214085 0.24378861113872843 35.24638346074295 493236.77046492265 0.04205733522343688 0.08249788699716071 1.724940398042607e-07 6.763225906531809 -0.5250649138302056 S(ph)RS(ph)FDYNYR ddPTM_A549_PD325901_60min_R1 4 SRSFDYNYR 9 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 2 S(0.989)RS(0.992)FDY(0.019)NYR;S(1)RS(0.999)FDY(0.001)NYR;S(0.991)RS(0.992)FDY(0.014)NY(0.003)R;S(0.999)RS(0.996)FDY(0.005)NYR 87.02600000000001 0.00033721 333205000.0 30773.0 34227.3 35305.2 28217.9 30336.2 23157.699999999997 24503.7 25175.1 30884.5 35069.1 35702.600000000006 True False 33897.05230611475 37111.75469171981 37701.22317941431 29960.855595499357 28205.48996620854 22969.11136911096 25436.201712439135 24672.962881016112 29586.531868741844 32854.83104106997 31311.406537428495 1.0825783972877574 1.185247128625723 1.2040731269720402 0.9568671263517102 0.9008055876535838 0.7335700918339307 0.812362155690248 0.7879864116459593 0.9449122585207151 1.049292723461545 1.0 14.934400696681266 -6.331510747620884 5.2416494230424435 0.924414662436709 1.1598044664336702 0.5883819809475028 0.0948529930060626 0.13655150889234563 7.125356552198302 0.015062638288262042 0.0359721098255847 4.661108928676347e-07 6.331510747620884 0.2353898039969612 S(ph)RS(ph)GSSPGLR ddPTM_A549_PD325901_60min_R1 1 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.879)RS(0.586)GS(0.464)S(0.072)PGLR 58.132 0.037268 11862000.0 1809.5 1447.9 1814.5 1743.5 1855.4 1668.8 1783.2 2074.2 1653.4 1622.1 2624.8 True False 1993.1991079165064 1569.9196144054915 1937.642881474891 1851.1920352242062 1725.0831047825154 1655.2098460888774 1851.060651804481 2032.8284538215776 1583.9133478533809 1519.6803291706822 2301.966239978105 0.8658680884631325 0.6819907204288208 0.8417338394560125 0.8041786204656997 0.7493954840966406 0.7190417554102013 0.8041215460319207 0.8830835216075595 0.6880697554749744 0.6601662104241531 1.0 11.168650960107332 -10.941909247057445 1.1330268057501518 1.0033094494550963 0.7738649344012255 0.0 0.11873064699005133 0.2663093127772887 0.5928388055031274 0.04916522936190868 0.010832546075033103 1.1431171828845382e-11 10.941909247057445 -0.22944451505387076 S(ph)RS(ph)IEDDEEGHLICQSGDVLR ddPTM_A549_PD325901_60min_R1 1 SRSIEDDEEGHLICQSGDVLR 21 1 A0A087WX74;B7ZL31;Q9HAZ1 A0A087WX74 CLK4 Dual specificity protein kinase CLK4 2 S(1)RS(1)IEDDEEGHLICQS(0.001)GDVLR 42.711000000000006 0.018537 2202600.0 380.68 380.2 452.81 354.88 320.9 390.97 512.88 399.02 423.35 355.91 409.11 True False 419.32635335819583 412.2407883120162 483.5404095677296 376.8001316090432 298.3610910449009 387.78606994569043 532.3979290587046 391.06123307486536 405.55807173928207 333.4377818600193 358.79206356196397 1.168716914179395 1.1489685257233164 1.3476898144493696 1.0501908204665993 0.8315710444731547 1.0808100549824986 1.4838620558471707 1.0899383592617522 1.1303429281936765 0.9293343296107609 1.0 8.487004168141066 -10.27738261571869 0.7969086825398498 1.0041608762106975 1.1478833591059334 0.15425909855192832 0.1589250043110746 1.1570697211875292 1.3995195520119235 0.09126283346244024 0.0322433194847814 5.279798937554523e-11 10.27738261571869 0.14372248289523593 S(ph)RS(ph)PAYSR ddPTM_A549_MK2206_60min_R1 1 SRSPAYSR 8 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.998)RS(0.837)PAY(0.136)S(0.029)R 57.347 0.053305 11964000.0 1007.8 1013.1 862.62 824.87 2533.7 1388.1 975.06 1179.0 2323.8 1156.0 1359.5 True False 1177.8920016556242 1064.6624627000324 984.952487119728 1026.9631870298213 2160.996086372095 1534.9878206537921 1152.2157806189266 1346.1268605360692 1797.4630103460677 894.8587971231316 1021.8986297087866 1.152650534418753 1.0418474315827513 0.9638455894597028 1.0049560271183433 2.114687331548649 1.5020940199237003 1.1275245382678287 1.3172802285875251 1.7589445352894697 0.8756825492349882 1.0 9.997036375585505 S(ph)RS(ph)PESQVIGENTK ddPTM_A549_MK2206_60min_R1 2 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.946)RS(0.907)PES(0.147)QVIGENTK;S(0.81)RS(0.986)PES(0.204)QVIGENTK 91.889 1.8453e-05 27710000.0 2926.2 3219.5 2608.3999999999996 2446.5 4624.9 2821.9 3174.9 3799.8999999999996 5322.8 4222.1 4389.7 True False 3420.071021278713 3383.3587984036667 2978.3103422168483 3045.89260982756 3944.583336567981 3120.511584974382 3751.738233428742 4338.547461705691 4117.1942987649745 3268.324677624202 3299.616340443296 1.0365056626005296 1.0253794530394162 0.9026232249221796 0.9231050811859998 1.195467269397155 0.9457195210019927 1.1370225645460057 1.3148642187663602 1.247779703446322 0.9905165753861888 1.0 11.688082570976317 -7.112034048966911 1.3069990616530245 1.1339020746646058 0.9790073463971111 0.21433123116842934 0.11677809118228613 0.531452415942562 1.785022102796496 0.020971312744593924 0.046381469335348396 7.726200088151426e-08 7.112034048966911 -0.15489472826749473 S(ph)RS(ph)PESQVIGENTK ddPTM_A549_PD325901_60min_R1 2 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.718)RS(0.897)PES(0.386)QVIGENTK;S(0.985)RS(0.897)PES(0.118)QVIGENTK 132.87 2.1424e-09 60684000.0 11784.0 13302.3 12245.2 12221.6 15343.8 12615.6 11423.8 12854.2 13676.7 13159.5 14216.4 True False 12980.303005077692 14423.331505425906 13076.232908369437 12976.500474732524 14266.104421236361 12512.862736288856 11858.538960343227 12597.812897075182 13101.9158610054 12328.606924185677 12467.872925184674 1.0411000403170558 1.156839790714523 1.0487942078681196 1.040795054024046 1.144229212700694 1.0036084592275 0.9511276728197466 1.0104219839799644 1.050854138442491 0.9888300111947977 1.0 13.605927735491573 -7.2894687655615416 24.71583763698769 1.0160916324325715 1.085650229962436 0.47540549610463556 0.04314182309881481 509.69941109898394 449443.28204234777 0.006513098287787593 0.010413073594213897 5.134891062870656e-08 7.2894687655615416 0.06955859752986449 S(ph)RS(ph)PLAIR ddPTM_A549_MK2206_60min_R1 2 SRSPLAIR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RS(1)PLAIR;S(1)RS(1)PLAIR 63.415 0.0028818000000000003 252100000.0 3221.0 2369.1 2291.59 1823.99 4552.9 3454.3999999999996 2456.6 2852.1000000000004 4483.0 3431.0 3752.6000000000004 True False 3764.6260541107026 2489.6770707557466 2616.5719203805825 2270.8676318820235 3883.174441190161 3819.942315154861 2902.9324212545444 3256.393909189926 3467.607657879948 2655.934717067013 2820.725853508784 1.3346302510851147 0.8826370232537004 0.9276236175613279 0.8050649902957511 1.3766578685269133 1.3542408988108936 1.0291437637030558 1.1544524630563449 1.2293316819734497 0.9415784641968016 1.0 11.461850741793462 -6.747505601972127 24.999784270700303 1.1424864119863996 0.9757235286718218 0.16638101805969074 0.1783234306426748 339.4101460860349 608961.262077923 0.025101496982439752 0.05204678268839707 1.7885224587764663e-07 6.747505601972127 -0.16676288331457778 S(ph)RS(ph)PLAIR ddPTM_A549_PD325901_60min_R1 2 SRSPLAIR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RS(1)PLAIR;S(1)RS(1)PLAIR 55.578 0.0059875 365280000.0 3115.5 3501.0 3620.6 3600.2 3741.8999999999996 2646.1 2931.6000000000004 3149.2 3099.6000000000004 3541.9 4046.1 True False 3431.7832664901184 3796.04155676057 3866.315688436476 3822.576177352558 3479.081852854205 2624.5510389116607 3043.1636422330757 3086.3867355003904 2969.3345911493525 3318.2638295355664 3548.455350341136 0.9671203179040139 1.0697729524469377 1.08957709953002 1.077250747141307 0.9804496631244741 0.7396319749829585 0.8576023485656982 0.869783167823621 0.8367963798287306 0.9351290919347653 1.0 11.792975437910794 -7.003670009497302 16.806855965336872 0.898217079861759 1.0517660325969458 0.5817744347520892 0.06919690949912527 1.706497467442941 7822.12029832822 0.01245109760020628 0.02297458367431675 9.91585096028317e-08 7.003670009497302 0.15354895273518676 S(ph)RS(ph)PLLNDR ddPTM_A549_MK2206_60min_R1 2 SRSPLLNDR 9 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)RS(1)PLLNDR;S(1)RS(1)PLLNDR 75.378 0.00060459 123136000.0 2484.67 2652.4 1762.6 2125.45 2739.7 2474.2 2053.45 2169.19 2857.3 2960.2 3200.4 True False 2904.021551650804 2787.395830683608 2012.563184017566 2646.185345415075 2336.693759258644 2736.018201758963 2426.5352847126683 2476.6793253657656 2210.1261121705033 2291.4887640518127 2405.6523534534754 1.2071659263159478 1.1586860531539873 0.8365976825905026 1.099986596823227 0.9713347632729075 1.1373290067582813 1.0086807768500774 1.0295250358225394 0.9187221540958398 0.9525436045496045 1.0 11.232212454945465 -8.436045160254796 2.446906825317938 0.9621423354033576 1.057265076265123 0.17103078990945264 0.0970341124234084 0.40245646309906047 4.732764220827492 0.016646295808780746 0.020108082816353425 3.6639947249696294e-09 8.436045160254796 0.09512274086176542 S(ph)RS(ph)PLLNDR ddPTM_A549_PD325901_60min_R1 3 SRSPLLNDR 9 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)RS(1)PLLNDR;S(1)RS(1)PLLNDR;S(1)RS(1)PLLNDR 93.09100000000001 0.00059626 188726000.0 8818.4 8978.199999999999 10172.9 9198.2 10803.2 7592.8 8279.8 9494.2 8936.7 10048.5 10106.2 True False 9713.637476237036 9734.82442299564 10863.294168617205 9766.35192337212 10044.42050101674 7530.966754184818 8594.892319880408 9304.83073294418 8561.121577211386 9414.035995112257 8863.20146848016 1.0959513343774534 1.0983417738629995 1.2256625562726846 1.1018988971540133 1.1332722760209504 0.849689221323343 0.9697277389491902 1.04982728487382 0.9659175194941638 1.0621484830950767 1.0 13.113612192069201 -7.216477511077957 23.80221283716213 0.9794542336683852 1.1328492156950272 0.5904477722069581 0.061388684931593426 121.19241855757932 64157.503294994596 0.00802762667945993 0.013904192673090694 6.074667182896549e-08 7.216477511077957 0.15339498202664192 S(ph)RS(ph)PLLNDRR ddPTM_A549_MK2206_60min_R1 1 SRSPLLNDRR 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)RS(1)PLLNDRR 43.798 0.052545 57849000.0 1424.6 1277.7 1240.4 1060.8 1674.1 1221.9 1207.9 1510.4 2269.9 2351.2 2728.5 True False 1665.0376518739865 1342.729472502054 1416.3073717550144 1320.6960476211223 1427.8421076668592 1351.2006469684247 1427.3597946891484 1724.5038254060046 1755.771274285453 1820.0622870206819 2050.938147230913 0.8118419632118344 0.6546903787980874 0.6905656192836682 0.643947283053986 0.6961897459436646 0.6588207688236513 0.695954578940524 0.8408365838503489 0.8560820211258047 0.8874291452806856 1.0 11.002068267933389 -8.942065659562779 0.6763544437818543 0.9730860424434399 0.6811478889489873 0.7440343337159406 0.05698532655528386 0.16726522521287016 0.1658405591125866 0.01607752313152408 0.014394626092991957 1.1427055598119839e-09 8.942065659562779 -0.2919381534944526 S(ph)RS(ph)PLSPR ddPTM_A549_MK2206_60min_R1 1 SRSPLSPR 8 1 Q9NXX6-2;Q9NXX6 Q9NXX6-2 NSMCE4A Non-structural maintenance of chromosomes element 4 homolog A 2 S(0.999)RS(0.996)PLS(0.005)PR 42.599 0.022576 2704300.0 137.57 100.29 170.0 0.0 362.27 0.0 280.88 165.08 429.99 271.22 272.94 True False 160.78845273642025 105.39433262677544 194.10855627084203 0.0 308.98056289616727 0.0 331.91226023038985 188.4805955362972 332.5979515529329 209.95121362952924 205.1614652392175 0.7837166328917642 0.5137140763928842 0.9461258041051334 0.0 1.5060360508533954 0.0 1.6178099519974738 0.9186939434095458 1.6211521552798667 1.0233462379727445 1.0 7.680615969798831 -7.780221902064138 24.99946017582055 1.2888396301723133 0.6461204205629097 0.31201772224362645 0.44827377241091265 203.20148728806313 270459.58198842563 0.06560526297389488 0.09072881141964816 1.6587391607832918e-08 7.780221902064138 -0.6427192096094035 S(ph)RS(ph)PLSPR ddPTM_A549_PD325901_60min_R1 1 SRSPLSPR 8 1 Q9NXX6-2;Q9NXX6 Q9NXX6-2 NSMCE4A Non-structural maintenance of chromosomes element 4 homolog A 2 S(0.997)RS(0.997)PLS(0.007)PR 40.067 0.029825 2089300.0 196.78 384.35 337.68 438.03 456.28 277.02 359.24 424.24 323.31 398.47 225.6 True False 216.75696073822044 416.7405233764425 360.59699543479803 465.0861182616915 424.23246688054667 274.7640409656883 372.91107478367087 415.77820039015853 309.72240504081077 373.31053619668455 197.85263019622852 1.095547532136635 2.106317833445645 1.8225534584865568 2.350669373464599 2.1441841155197006 1.3887307977315224 1.8847921021510854 2.101453996228371 1.5654197001759884 1.8868110867489525 1.0 7.628282433987706 -9.744557935230436 0.6659889658995729 1.032754310502777 1.8911506948690366 0.0 0.42710686880121995 0.4148093245235416 0.38946177459032083 0.1592038153089632 0.07863425160675974 1.8007029032145805e-10 9.744557935230436 0.8583963843662596 S(ph)RS(ph)PMHYMYRPR ddPTM_A549_MK2206_60min_R1 2 SRSPMHYMYRPR 12 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LNQ0 Q14966-3 ZNF638 Zinc finger protein 638 2 S(1)RS(1)PMHYMYRPR;S(1)RS(1)PMHYMYRPR 71.03 0.00086221 8849500.0 1127.73 1092.61 1059.98 842.72 1670.79 1375.33 1227.22 1572.19 2129.3 2257.2 2023.3999999999999 True False 1318.0632536486378 1148.2191820853634 1210.3011027998066 1049.1864378311386 1425.0190042821291 1520.866507729833 1450.1899886070184 1795.0527471299436 1647.0169497933914 1747.2969523065158 1520.9339370009259 0.8666144015746526 0.7549434950143166 0.7957617838328699 0.6898303813905231 0.9369368186313681 0.9999556658777529 0.9534865080771326 1.1802305829729478 1.0828984150627108 1.148831589458742 1.0 10.570741774456234 -7.046369578643937 2.52540097578954 1.0432844010445388 0.7769960844701053 0.7509395152162004 0.07549280661783461 0.10588900691051781 1.3400971187499688 0.010541812088318312 0.020385260498789772 8.987324470383127e-08 7.046369578643937 -0.2662883165744335 S(ph)RS(ph)PPPVSK ddPTM_A549_PD325901_60min_R1 2 SRSPPPVSK 9 1 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 2 S(0.995)RS(0.976)PPPVS(0.029)K;S(0.998)RS(0.991)PPPVS(0.011)K 49.31 0.0088757 62493000.0 9060.3 9363.9 9542.2 10312.4 12234.599999999999 9941.0 9077.0 10273.7 10213.900000000001 11127.2 11849.0 True False 9980.094986159665 10153.028715609904 10189.791073909999 10949.37352684033 11375.283903078664 9860.043791928048 9422.430202124991 10068.782993938266 9784.645302794033 10424.626693020167 10391.648116999606 0.9603957787825125 0.9770373863026264 0.9805750694387553 1.0536705442256409 1.0946563793350486 0.9488431171758106 0.9067310686464566 0.9689303256397638 0.9415874356626278 1.0031735655065737 1.0 13.343136863595037 S(ph)RS(ph)PQRPGWSR ddPTM_A549_PD325901_60min_R1 1 SRSPQRPGWSR 11 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.998)RS(0.998)PQRPGWS(0.004)R 40.801 0.030376999999999998 14794000.0 1663.0 1701.5 1593.1 1147.7 1184.3 1287.7 1102.3 1404.6 1697.5 1786.3 2065.2 True False 1831.826535764105 1844.8913764147703 1701.217346088535 1218.590822384182 1101.1188536132006 1277.213398135574 1144.248629701705 1376.5841511126164 1626.1599782152618 1673.5127131481354 1811.193492381432 1.0113919597599392 1.018605347344215 0.9392797363972991 0.6728109544949439 0.6079520814561917 0.7051777755982555 0.6317649850857181 0.7600425669057737 0.8978389029419047 0.9239833955828385 1.0 10.822724964350272 -9.111409917407832 1.9078674975463172 0.9649414771953962 0.7884438939984286 0.18224419181822105 0.13806218628392844 0.3659759076119791 2.7380314876821488 0.03143776302873047 0.029989766811020068 7.737311516396183e-10 9.111409917407832 -0.17649758319696762 S(ph)RS(ph)PSSPELNNK ddPTM_A549_MK2206_60min_R1 4 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.975)RS(0.556)PS(0.382)S(0.086)PELNNK;S(0.755)RS(0.814)PS(0.424)S(0.007)PELNNK;S(0.707)RS(0.811)PS(0.435)S(0.047)PELNNK;S(0.99)RS(0.964)PS(0.046)S(0.001)PELNNK 88.009 8.1168e-05 64210800.0 11368.900000000001 13437.6 12324.300000000001 10560.7 16308.7 11803.1 10389.8 11809.7 17175.8 16840.4 17556.8 True False 13287.6923770814 14121.516443369803 14072.071059110229 13148.071974087834 13909.711834004262 13052.096207736317 12277.492172250453 13483.761140689412 13285.50872411653 13036.14194383425 13196.962016970378 1.0068750944341849 1.0700581258937105 1.0663114011402413 0.9962953562479248 1.0540086283583554 0.9890227910751146 0.9303271583613297 1.0217322080150137 1.006709628097155 0.9878138564823233 1.0 13.687918234323382 -7.266108498792735 24.930723157382033 0.9978349818300453 1.03962837256888 0.3792340253842411 0.030429025794794944 357.23978990688806 1907470.263465237 0.0044643709490528975 0.007280078863940288 5.4186550047706215e-08 7.266108498792735 0.0417933907388347 S(ph)RS(ph)PSSPELNNK ddPTM_A549_PD325901_60min_R1 2 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.89)RS(0.832)PS(0.227)S(0.052)PELNNK;S(0.992)RS(0.922)PS(0.023)S(0.063)PELNNK 83.53 0.0017596 18178900.0 7227.8 8302.4 7592.9 8633.1 9451.599999999999 9284.0 8758.099999999999 8006.400000000001 8898.0 9281.3 9724.599999999999 True False 7961.560935174864 9002.072385275329 8108.1998538168655 9166.346979807347 8787.75222224988 9208.394182100388 9091.394288116207 7846.706071100704 8524.048003628512 8695.277134043432 8528.535849318454 0.9335202519915656 1.0555237785621452 0.9507141667775039 1.0747855366686256 1.0303940063700547 1.079715714959006 1.0659970771938225 0.9200531263203593 0.9994737847422778 1.0195509859688638 1.0 13.05808237037502 -5.235116803233333 22.564458045040006 1.0100584035825184 0.9335198721189291 0.17976921889776654 0.04915422891778735 2839.036390163596 2433557.5734769045 0.006462396566184967 0.5560659494630753 5.8194668252006725e-06 5.235116803233333 -0.07653853146358935 S(ph)RS(ph)PVDLR ddPTM_A549_PD325901_60min_R1 1 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)RS(1)PVDLR 55.754 0.005880699999999999 40873000.0 560.45 395.57 468.58 374.25 708.85 413.63 401.24 519.0 591.59 577.11 629.51 True False 617.3464714185163 428.9060721530356 500.3806566004431 397.36657251658113 659.0628213997447 410.2615344185893 416.5094077669527 508.6481378523767 566.7275296096418 540.6711761097914 552.0842607926762 1.118210598020196 0.7768851652050671 0.9063483459608183 0.7197571108910926 1.1937721616143702 0.7431139837776584 0.7544308674348609 0.9213233811847227 1.0265236121673547 0.9793272775671996 1.0 9.108744662123518 -8.643716975044931 4.777670581283361 1.0123309755623768 0.8809760604767626 0.1043880117488567 0.14407282388973075 0.28794450191880216 10.917024427445167 0.02271692598596983 0.025727522301951765 2.2713445800446635e-09 8.643716975044931 -0.13135491508561425 S(ph)RS(ph)RAS(ph)PVSR ddPTM_A549_PD325901_60min_R1 1 SRSRASPVSR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.999)RS(0.999)RAS(0.914)PVS(0.088)R 48.351000000000006 0.0092317 56417000.0 1937.9 1889.5 2134.1 1923.7 2778.8 1960.7 2085.6 2042.6 2023.7 2000.7 2478.2 True False 2134.6341813934205 2048.7347962008257 2278.9328593858168 2042.5225799603134 2583.62667433958 1944.7327092680123 2164.968649284112 2001.8587406112995 1938.6509266063192 1874.3754605584024 2173.3971106041367 0.9821648197554006 0.942641722584853 1.0485579686596456 0.9397834247569031 1.188750395283912 0.8947894058474372 0.9961219874274693 0.9210736182744096 0.8919911217087404 0.8624173886185872 1.0 11.085736084195881 S(ph)RS(ph)RDKEER ddPTM_A549_MK2206_60min_R1 2 SRSRDKEER 9 3 P08621-4;P08621;P08621-2 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 2 S(1)RS(1)RDKEER;S(1)RS(1)RDKEER 50.354 0.010740999999999999 106849000.0 10539.3 6683.9 4027.1000000000004 2547.73 341.46000000000004 353.76 0.0 478.1 500.66999999999996 10890.4 11250.2 True False 12318.076178854066 7024.081960754855 4598.20333504887 3171.923964371945 291.2316863293268 391.19464839311706 0.0 545.8721391198428 387.2690444057 8430.251076288718 8456.464850275688 1.4566460568274562 0.8306168221731405 0.5437500677246905 0.37508864762425376 0.03443894008733832 0.04625983260373438 0.0 0.06455086715130695 0.04579561924071318 0.9969001498319814 1.0 13.045838968236367 -10.948386898517144 1.2449703835112678 0.9953551001496456 0.32716741611825234 0.23174904979803668 0.42665638666281797 0.5595751020840322 1.5588031683421604 0.31190329212063855 0.0749560720260839 1.1261937205957282e-11 10.948386898517144 -0.6681876840313932 S(ph)RS(ph)RDKEER ddPTM_A549_PD325901_60min_R1 2 SRSRDKEER 9 3 P08621-4;P08621;P08621-2 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 2 S(1)RS(1)RDKEER;S(1)RS(1)RDKEER 51.773999999999994 0.0085 312490000.0 3388.9 3789.17 3105.67 2293.11 2876.91 2246.3599999999997 1855.41 2240.21 2454.1 3345.2000000000003 4239.1 True False 3732.938633223679 4108.496653993273 3316.4394421108404 2434.7501966693308 2674.845766400703 2228.0663889382854 1926.0186428693098 2195.5272541392537 2350.962711362636 3133.983501104596 3717.7175738689402 1.0040941946375175 1.1051126322427065 0.8920633093329629 0.65490456127778 0.7194860053925652 0.5993102877418388 0.5180648084746653 0.5905578383821181 0.6323672158119438 0.8429859016544751 1.0 11.860201460983228 -5.980226523559355 4.328518087251071 0.7512209581324562 1.0500508763101049 0.4893865225457442 0.13610251286734604 0.19229312068319387 8.625283634431353 0.026131863195523103 0.0833143293738123 1.0465825189253146e-06 5.980226523559355 0.2988299181776487 S(ph)RS(ph)RDS(ph)GDENEPIQER ddPTM_A549_MK2206_60min_R1 2 SRSRDSGDENEPIQER 16 2 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 3 S(1)RS(1)RDS(1)GDENEPIQER;S(1)RS(1)RDS(1)GDENEPIQER 80.752 7.9938e-06 9148100.0 239.51 376.17 203.39 179.27 499.54 394.13 252.45 348.14 549.85 484.21 668.05 True False 279.9334325427055 395.31544624802217 232.23376035250925 223.1911580477362 426.05832773663667 435.83657499767986 298.31689723427087 397.48991113403514 425.3098529300218 374.82662470154975 502.1547477579659 0.5574644744325526 0.7872382926040972 0.46247448896857557 0.4444668880345075 0.8484602199599096 0.8679327974964188 0.594073636794642 0.7915685611034424 0.8469696937626434 0.7464364847192739 1.0 8.971988214149356 -8.522080272152772 0.29189502819671465 1.032976431879074 0.5457927028931068 0.27022215059133714 0.14744649189631306 0.8436225024518538 0.22940747124365368 0.1251353492031647 0.13960696556909927 3.0055207304828538e-09 8.522080272152772 -0.4871837289859672 S(ph)RS(ph)RDS(ph)GDENEPIQER ddPTM_A549_PD325901_60min_R1 4 SRSRDSGDENEPIQER 16 2 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 3 S(1)RS(1)RDS(1)GDENEPIQER;S(1)RS(1)RDS(1)GDENEPIQER;S(1)RS(1)RDS(1)GDENEPIQER;S(1)RS(1)RDS(1)GDENEPIQER 88.04 3.7627e-06 159897000.0 6915.4 7934.390000000001 8284.41 7077.049999999999 7321.0 5503.69 6076.94 6772.720000000001 7729.200000000001 7959.04 8415.900000000001 True False 7617.446317151586 8603.048891044129 8846.639880804301 7514.183305353297 6806.798216078899 5458.8697733826 6308.201277129162 6637.632786503942 7404.368603017027 7456.504856101738 7380.797652785638 1.0320627492445391 1.1655988005303455 1.1986021426106201 1.0180719833875025 0.9222307040906206 0.739604312458333 0.8546774446185149 0.8993110363889717 1.0031935505266822 1.0102573199913598 1.0 12.849561023377749 -6.461718856104237 4.900465075932536 0.95790756506553 1.1340404823025978 0.5018089942225059 0.08806086988852559 0.17750667896355052 8.617603319628232 0.014422925774727287 0.033792186735008924 3.453672431437463e-07 6.461718856104237 0.1761329172370678 S(ph)RS(ph)RDSGDENEPIQER ddPTM_A549_MK2206_60min_R1 2 SRSRDSGDENEPIQER 16 2 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 2 S(0.976)RS(0.869)RDS(0.155)GDENEPIQER;S(0.727)RS(0.81)RDS(0.463)GDENEPIQER 51.876000000000005 0.01529 78819000.0 1206.37 1308.17 1220.19 1062.1100000000001 1295.95 856.9000000000001 846.3799999999999 1052.72 1232.53 2018.4099999999999 1375.71 True False 1409.9757630852307 1374.7502653541615 1393.2312898595226 1322.3269976799297 1105.3174717345837 947.576589235815 1000.1562902798261 1201.9462838197887 953.3639229459665 1562.449779153375 1034.0832393355463 1.3635031585960289 1.3294386883569567 1.347310580872337 1.2787432842733197 1.0688863620348485 0.91634459702169 0.9671912784530575 1.1623303019514206 0.9219411810199667 1.5109516523614988 1.0 10.014136605849888 -6.788374634023985 2.5893165932022884 0.9762483356478266 1.3429910282763675 0.23213047950815524 0.172963743641636 0.07069359292713295 0.9680621199733617 0.009707158153234604 0.020909248152147234 1.6278911643744438e-07 6.788374634023985 0.36674269262854087 S(ph)RS(ph)RT(ph)PPVTR ddPTM_A549_PD325901_60min_R1 2 SRSRTPPVTR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.999)RS(0.995)RT(0.987)PPVT(0.019)R;S(1)RS(0.999)RT(0.994)PPVT(0.007)R 47.622 0.013444999999999999 180681000.0 4001.7999999999997 3218.4 3648.8 2995.2 4684.7 3203.7 2756.3 3060.5 3071.6000000000004 3667.1 4596.7 True False 4408.059790030542 3489.625862975784 3896.4295100168515 3180.20670140725 4355.662833337636 3177.6101293833503 2861.192504805232 2999.455926584198 2942.5113337767307 3435.558680168799 4031.335040882108 1.0934491292160131 0.8656253641999969 0.9665357680527249 0.788871842492997 1.08045170871845 0.7882277451908458 0.7097382072662376 0.744035386830036 0.7299098943492603 0.8522136327862878 1.0 11.9770419740115 -7.299757102074723 24.963447029886186 0.839961578501221 0.9447687210151046 0.2909371192048419 0.11211488085929744 910.5068384932762 593180.2402779866 0.02054287755973649 0.03284044522956431 5.014676226123375e-08 7.299757102074723 0.10480714251388357 S(ph)RS(ph)RTS(ph)PVTR ddPTM_A549_PD325901_60min_R1 1 SRSRTSPVTR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.971)RS(0.946)RT(0.252)S(0.826)PVT(0.006)R 40.278 0.029779000000000003 112490000.0 1067.7 948.19 998.51 1046.6 937.84 841.54 973.18 1107.9 1026.7 1300.9 1384.4 True False 1176.092118000803 1028.0972989730947 1066.2748931284063 1111.2461049989415 871.969353772359 834.6867772516978 1010.2148974445302 1085.802065369264 983.5513694454248 1218.7609519870175 1214.1275764346583 0.9686726014859591 0.846778640834557 0.8782231075416076 0.9152630469543959 0.7181859391851861 0.6874786418267461 0.8320500390997402 0.8943064027569261 0.8100889795565543 1.0038162180336645 1.0 10.24570430775436 -10.769151342562704 0.8345113640386007 1.008776017657159 0.8341987535472227 0.39327168244841404 0.07759468717414308 0.6274790833321495 0.710432105852232 0.07221095979071862 0.014986891586884215 1.7015654450219394e-11 10.769151342562704 -0.17457726410993624 S(ph)RSAEPRPELGPGQETGTNSR ddPTM_A549_MK2206_60min_R1 2 SRSAEPRPELGPGQETGTNSR 21 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(0.5)RS(0.5)AEPRPELGPGQETGTNSR;S(0.5)RS(0.5)AEPRPELGPGQETGTNSR 129.82 3.9822e-18 34819000.0 2402.5 3124.3 2922.6000000000004 2293.19 4198.6 3241.5 2818.1 2815.2 4856.4 4860.8 4913.6 True False 2807.983264514427 3283.313525035743 3337.0686268068393 2855.0216529452114 3580.991501851789 3584.5133784664454 3330.1122919227496 3214.2632211884147 3756.433154077217 3762.741904027784 3693.417511538872 0.7602669494422994 0.88896354522014 0.9035178439429776 0.7730026849186782 0.969560438446007 0.9705139934133654 0.9016344026958516 0.8702680406822416 1.0170616082101396 1.018769714572569 1.0 11.850740641649258 -6.151114687034847 0.2624115207931763 1.0228198623055902 0.7095426328103993 0.5321079439063985 0.058898742161165744 3.251167674916712 0.2466111484790064 0.03682721140124606 0.31614916738859455 7.061310569104759e-07 6.151114687034847 -0.3132772294951909 S(ph)RSAEPRPELGPGQETGTNSR ddPTM_A549_PD325901_60min_R1 1 SRSAEPRPELGPGQETGTNSR 21 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(0.554)RS(0.446)AEPRPELGPGQETGTNSR 78.921 6.2175e-05 16534000.0 2545.2 2735.7 3172.3 2834.2 3482.4 3127.1 3427.2 2978.0 3283.8 3293.5 3662.5 True False 2803.5868303227885 2966.2470399399845 3387.5913545895824 3009.2620970647818 3237.8082376278066 3101.633934386701 3557.6239714357994 2918.6014538041954 3145.7933057221076 3085.5478479277717 3212.035718500384 0.8728379993332422 0.9234788464073643 1.0546555678313443 0.9368706828919474 1.0080237336649094 0.9656287184237083 1.107591659378172 0.9086453917663203 0.9793768131541192 0.9606206525524983 1.0 11.649272220673247 -5.5554567076972114 7.242010677254855 0.991682452711198 0.8848805906159671 0.34106437403785383 0.0518609323268582 0.11355935539638821 19.293103836574478 0.006182213822901334 0.024877842789985335 2.7831928004033393e-06 5.5554567076972114 -0.1068018620952309 S(ph)RSAPDGGDEENQEQLQDQIAEGSSIEEEEKTDNATLLR ddPTM_A549_MK2206_60min_R1 1 SRSAPDGGDEENQEQLQDQIAEGSSIEEEEKTDNATLLR 39 2 Q8IZQ1;Q8IZQ1-2;H0Y9T6 Q8IZQ1 WDFY3 WD repeat and FYVE domain-containing protein 3 1 S(0.5)RS(0.5)APDGGDEENQEQLQDQIAEGSSIEEEEKTDNATLLR 84.60799999999999 4.102e-07 6160700.0 660.89 626.2 479.92 647.02 821.89 806.9 653.58 474.92 614.36 750.45 712.7 True False 772.4320747908179 658.0709052835454 547.9798725029557 805.5399290458311 700.9910697510992 892.2856224231289 772.3270259234483 542.2413643815017 475.20844093132337 580.9228237898392 535.7169204806565 1.4418661148462055 1.2283929816760506 1.0228907311930648 1.503667138837212 1.3085102279803953 1.6655916367594874 1.4416700245915328 1.0121789020495962 0.8870513936818653 1.084383937824146 1.0 9.06532705370239 -8.336493479647965 5.123242683823665 0.9475531823880234 1.3676477945898466 0.5532137313601104 0.1614998953078721 0.11380682130421177 5.498797841058785 0.026879849426131166 0.032686073847178615 4.6079368684056954e-09 8.336493479647965 0.4200946122018232 S(ph)RSAPPNLWAAQR ddPTM_A549_MK2206_60min_R1 1 SRSAPPNLWAAQR 13 1 Q92934;F5H3B1;F5H1R6 Q92934 BAD Bcl2-associated agonist of cell death 1 S(0.5)RS(0.5)APPNLWAAQR 89.624 5.2242e-05 4607300.0 712.56 558.47 657.91 945.29 1171.0 777.5 946.27 972.84 1479.3 1423.9 1623.5 True False 832.8227075806033 586.8937375817658 751.2115309185277 1176.886092435681 998.7474512143204 859.7745339372698 1118.195010282723 1110.7430491975492 1144.240911956682 1102.2400010585018 1220.3401436794525 0.6824512918747032 0.48092635534566625 0.6155755301579663 0.9643918529855512 0.8184172719279668 0.7045367952454307 0.9162978175177035 0.9101913552139188 0.9376409666461326 0.9032235862823733 1.0 10.253067608846834 -5.379269602639103 0.2816048026435352 1.0005031465251562 0.22206872390221954 0.5821951820714537 0.10308184803111091 3.364827016277917 0.20397977407111242 0.04522516035545283 0.8947297415177058 4.175710651439857e-06 5.379269602639103 -0.7784344226229366 S(ph)RSAVTLPR ddPTM_A549_PD325901_60min_R1 1 SRSAVTLPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.617)RS(0.383)AVTLPR 76.52199999999999 0.00055376 10284000.0 898.44 560.62 795.01 898.37 883.83 881.35 929.61 839.88 876.65 861.68 1091.2 True False 989.6489674034292 607.865414896061 848.9641593834954 953.8602745536966 821.7528298479734 874.1725778106609 964.9868172521108 823.1279345268863 839.8074491324949 807.2733777447714 956.9893176867221 1.0341274966325158 0.6351851621138477 0.88711978670321 0.9967303259553731 0.8586854781559647 0.9134611658192282 1.008356937133552 0.8601223851866899 0.8775515396164666 0.8435552652731267 1.0 9.902359010613084 -14.999999999999348 0.22369839205749031 1.5808328735918604 0.8758912326939822 0.0 0.11200586345824151 67.0147837509155 0.8297741392688417 17.182082309347006 0.06411630874696539 1.000000000001501e-15 14.999999999999348 -0.7049416408978783 S(ph)RSDIDVNAAAGAK ddPTM_A549_MK2206_60min_R1 1 SRSDIDVNAAAGAK 14 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.5)RS(0.5)DIDVNAAAGAK 139.21 3.5976e-10 395980000.0 10916.0 10035.0 10865.0 10724.0 13034.0 10155.0 10659.0 11043.0 15563.0 15549.0 16519.0 True False 12758.353929423303 10545.738637049468 12405.820375780588 13351.38048141865 11116.715866035398 11229.595359656565 12595.602327669209 12608.37906776914 12038.005349004152 12036.470100750497 12416.876398793273 1.0275010815653458 0.8493068867202664 0.9991095970792011 1.0752608025248762 0.8952908532709378 0.9043816656456295 1.0143937914122512 1.0154227732342151 0.9694874107125734 0.9693637686463767 1.0 13.600014673015995 S(ph)RSDIDVNAAAGAK ddPTM_A549_PD325901_60min_R1 2 SRSDIDVNAAAGAK 14 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.688)RS(0.312)DIDVNAAAGAK;S(0.703)RS(0.297)DIDVNAAAGAK 186.38 1.0551000000000002e-26 1229870000.0 18056.3 16894.8 19251.9 19492.5 21332.0 19484.7 20390.5 21651.0 20924.3 20399.1 22263.6 True False 19889.362283654482 18318.58408830576 20558.44970507934 20696.50745432054 19833.71391140489 19326.02306333169 21166.47163560973 21219.153820119085 20044.924437213307 19111.097344667814 19525.31834058845 1.0186447123020408 0.9381964364814387 1.0529123954073139 1.0599830995481119 1.0157946500762225 0.9897929819232462 1.084052575553133 1.0867507228299351 1.0266119142111358 0.978785442127232 1.0 14.253058449793492 -5.771645646546129 24.99998424426648 1.0263874618494302 0.9784205644311778 0.21348270077697795 0.038672120400071716 224.01847109491587 548732.4237319656 0.005282283020674372 0.01669941054713029 1.6918207742395035e-06 5.771645646546129 -0.04796689741825244 S(ph)RSDIDVNAAASAK ddPTM_A549_MK2206_60min_R1 1 SRSDIDVNAAASAK 14 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.618)RS(0.382)DIDVNAAASAK 141.78 1.7350999999999998e-13 319450000.0 9982.6 10058.0 8177.2 8174.7 11488.0 9769.3 9063.2 9682.3 13343.0 14670.0 12233.0 True False 11667.41882886232 10569.909238808528 9336.84991963488 10177.501866976232 9798.130418061579 10803.0808416635 10709.866124038985 11054.795675800162 10320.831804392623 11356.036811242519 9195.20848637557 1.268858541505589 1.1495018578936884 1.0154038305351292 1.1068266567371599 1.0655691420786544 1.1748598041763052 1.1647224899693862 1.2022343693652973 1.1224141159697332 1.2349950333446622 1.0 13.166666570430374 -10.308154325952948 0.8354065331414576 1.0044230947428197 1.1370182034091199 0.0 0.09364826697255033 0.48661608787379773 0.6478482504754306 0.03622065591140561 0.012937411060477643 4.918647211641397e-11 10.308154325952948 0.1325951086663002 S(ph)RSDITQVDWR ddPTM_A549_PD325901_60min_R1 1 SRSDITQVDWR 11 1 C9J119;Q6ZWE6-3;Q6ZWE6-2;Q6ZWE6 C9J119 PLEKHM3 Pleckstrin homology domain-containing family M member 3 1 S(0.68)RS(0.32)DITQVDWR 135.14 1.3988000000000001e-08 9739800.0 1627.4 1169.0 1513.0 916.6 1135.3 1102.0 974.84 1563.2 1844.4 1392.2 1984.0 True False 1792.6124499714401 1267.515732605856 1615.681278408107 973.2163002503631 1055.5604445723777 1093.0256773669357 1011.938069652917 1532.0207496933233 1766.8862820737736 1304.2962544056609 1739.9805776122223 1.0302485401483301 0.7284654489334988 0.9285628237444515 0.5593259561471136 0.6066507052744949 0.6281826886061547 0.5815800950155438 0.8804815234177599 1.0154632211461085 0.7496039158066629 1.0 10.76485548686315 -8.517036112765718 4.350603438293518 1.0060081013014504 0.7167461908102709 0.20180903951304496 0.15750432928174957 0.13093481341726843 6.080899377835019 0.023189227441895756 0.027191045521454613 3.0406321783399423e-09 8.517036112765718 -0.28926191049117944 S(ph)RSDVDMDAAAEATR ddPTM_A549_MK2206_60min_R1 2 SRSDVDMDAAAEATR 15 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.5)RS(0.5)DVDMDAAAEATR;S(0.5)RS(0.5)DVDMDAAAEATR 147.35 2.8129000000000002e-14 35624000.0 1114.0 1225.03 1071.26 1232.7 1392.87 1086.74 1205.46 1082.01 1752.1399999999999 1664.18 2122.42 True False 1302.0159653149096 1287.3787944738137 1223.1807764158964 1534.7115553380058 1187.9806681237317 1201.7381054803705 1424.4764782730208 1235.3882310166523 1355.2830875926315 1288.2405821767936 1595.3645381879537 0.8161244243235874 0.8069496116141855 0.7667092674663617 0.9619817406002776 0.7446452767923897 0.7532686584881272 0.8928846318039444 0.774361095188834 0.8495131082279093 0.8074897939250941 1.0 10.639670399778101 -10.267029068655164 0.5797450593777282 1.0106822327966325 0.8125655968994092 0.0 0.08303919949623663 0.5165404540927382 0.3064294716430029 0.0504007788323167 0.01368646013429951 5.407181298196062e-11 10.267029068655164 -0.19811663589722328 S(ph)RSDVDMDAAAEATR ddPTM_A549_PD325901_60min_R1 2 SRSDVDMDAAAEATR 15 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.5)RS(0.5)DVDMDAAAEATR;S(0.5)RS(0.5)DVDMDAAAEATR 69.03 0.00054503 54609000.0 1106.8899999999999 1049.5700000000002 1071.8200000000002 1006.9399999999999 1328.12 1096.31 1502.57 1175.67 1225.4299999999998 1040.35 1444.06 True False 1219.260657950649 1138.020947366235 1144.5601505772484 1069.1363968733372 1234.837432965266 1087.3820148404222 1559.7511235878533 1152.2203395547276 1173.929438647616 974.6621234527582 1266.4497746505574 0.9627390539724096 0.8985914563254127 0.9037548693102012 0.8441996029162202 0.9750386139916098 0.8586065050550117 1.2315933523840095 0.9098034226210445 0.9269451202449226 0.7696018768069108 1.0 10.306574147895391 S(ph)RSDVDMDPSSATAVLGPAR ddPTM_A549_MK2206_60min_R1 6 SRSDVDMDPSSATAVLGPAR 20 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 S(0.5)RS(0.5)DVDMDPSSATAVLGPAR;S(0.493)RS(0.493)DVDMDPS(0.01)S(0.003)ATAVLGPAR;S(0.5)RS(0.5)DVDMDPSSATAVLGPAR;S(0.5)RS(0.5)DVDMDPSSATAVLGPAR;S(0.5)RS(0.5)DVDMDPSSATAVLGPAR;S(0.56)RS(0.44)DVDMDPSSATAVLGPAR 130.29 2.1158e-17 128643000.0 12077.0 14536.7 12823.500000000002 11747.640000000001 18472.600000000002 13158.56 12658.4 12301.0 20825.5 18475.7 22323.7 True False 14115.30234569854 15276.555938734133 14642.065125524377 14625.812327371592 15755.305010505244 14550.990085254783 14958.26742701641 14044.704420232561 16108.557501489811 14302.026538069076 16780.109187223283 0.8411925207522617 0.9103966945796761 0.8725846156396374 0.8716160404074119 0.9389274428858696 0.8671570561849624 0.8914284919198225 0.836985282010351 0.9599793017887628 0.8523202309648218 1.0 14.034464482892922 -8.914660870547074 5.083798175075708 0.9828345245669453 0.8815637562166491 0.06108548851843376 0.04830166127491981 0.07696749324724923 3.306083140751185 0.004989247790642093 0.0052514292954599934 1.217136060078044e-09 8.914660870547074 -0.10127076835029625 S(ph)RSDVDMDPSSATAVLGPAR ddPTM_A549_PD325901_60min_R1 3 SRSDVDMDPSSATAVLGPAR 20 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 S(0.5)RS(0.5)DVDMDPSSATAVLGPAR;S(0.5)RS(0.5)DVDMDPSSATAVLGPAR;S(0.617)RS(0.383)DVDMDPSSATAVLGPAR 202.44 1.3869000000000001e-55 170184000.0 7925.7 9366.7 9006.9 9837.7 10387.5 11046.5 9752.3 10330.1 10584.1 11456.0 11217.7 True False 8730.311229408038 10156.06468143651 9618.162396889606 10445.352385962255 9657.917834929593 10956.540966455403 10123.429113163333 10124.05805169332 10139.287084199203 10732.666204906809 9837.994014859185 0.8874076581284643 1.0323308457086795 0.9776548331257827 1.0617359972150546 0.9816958437200096 1.1136966489211904 1.02901354665118 1.0290774762011512 1.0306254576781555 1.090940509690931 1.0 13.264148462031155 -5.258772807281003 24.570856454705297 1.0221835659947132 0.8874075961437745 0.4879935400242549 0.04161417930961624 107.84772382795387 993678.1983056859 0.004640200363402914 0.04375437780087764 5.510959161301831e-06 5.258772807281003 -0.13477596985093865 S(ph)RSEDEDDDLQYADHDYEVPQQK ddPTM_A549_PD325901_60min_R1 1 SRSEDEDDDLQYADHDYEVPQQK 23 1 E7EWZ1;P10243-2;P10243 E7EWZ1 MYBL1 Myb-related protein A 1 S(0.565)RS(0.435)EDEDDDLQYADHDYEVPQQK 94.73 1.5839e-07 8522900.0 2374.6 2953.5 2307.8 2912.9 3178.8 3068.4 3133.2 3395.1 2837.7 3220.3 3045.4 True False 2615.6676439118733 3202.4018103091535 2464.4211859287693 3092.823217324114 2955.532054264665 3043.411967724776 3252.435640552826 3327.382067095575 2718.441337367568 3016.9697084201644 2670.835106381182 0.9793444895428017 1.1990264028872273 0.9227155881097838 1.1579985637955388 1.1065947303161032 1.139498264214601 1.2177598058307977 1.2458208517425002 1.0178244740278592 1.129597892888256 1.0 11.383075193413273 -8.958924380637459 24.847309287555486 1.0078636355279162 1.122297409060979 0.055264312194948206 0.09873056596126435 137.31489828110017 83064.34363285845 0.015332854013746166 0.016305331510571057 1.0991972150085634e-09 8.958924380637459 0.11443377353306272 S(ph)RSESDLSQPESDEEGYALSGR ddPTM_A549_MK2206_60min_R1 1 SRSESDLSQPESDEEGYALSGR 22 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 S(0.448)RS(0.448)ES(0.102)DLS(0.002)QPESDEEGYALSGR 83.21600000000001 1.6939e-05 21323000.0 569.07 799.72 629.28 368.14 549.03 308.69 567.5 750.04 703.2 581.99 682.2 True False 665.1151035742872 840.4223321197012 718.521366412444 458.3343165264326 468.268414295643 341.3553709081619 670.6074041610166 856.3604669011654 543.9263227796513 450.5180547903908 512.7909122378329 1.2970493191303012 1.6389181478510924 1.401197543218537 0.8938035085806214 0.9131761174395768 0.6656813971575241 1.3077599235026776 1.669999304714637 1.0607175552428234 0.8785609183757144 1.0 9.002226884286786 -6.139500012127389 5.586791622951901 1.0540416014250262 1.4786851309652704 0.3198336275996432 0.25829283117226304 0.20348886021775595 8.467590753611224 0.036373926224501606 0.09867115708087439 7.252704578385446e-07 6.139500012127389 0.4246435295402442 S(ph)RSESDLSQPESDEEGYALSGR ddPTM_A549_PD325901_60min_R1 2 SRSESDLSQPESDEEGYALSGR 22 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 S(0.625)RS(0.362)ES(0.013)DLSQPESDEEGYALSGR;S(0.396)RS(0.396)ES(0.208)DLSQPESDEEGYALSGR 185.48 5.4964e-50 45106000.0 1644.9099999999999 1709.96 1405.83 1586.71 1795.1399999999999 1636.63 1474.95 1754.76 1487.25 2103.3999999999996 2458.5 True False 1811.900052281259 1854.0643303051418 1501.2380777425435 1684.717473020132 1669.0555592968005 1623.3018279029475 1531.0800293736086 1719.7599352174109 1424.7460545511924 1970.590965031509 2156.120085715548 0.8403521048225598 0.8599077308302318 0.6962683051321467 0.7813653256984652 0.7741013918261856 0.7528809914890361 0.7101088847124633 0.7976178815878323 0.660791606177336 0.9139523248666979 1.0 11.07422181629689 -10.936793111695334 1.172775267015504 1.0011332468080314 0.7553855660188146 0.5855452453994512 0.0612750616320263 0.22280339205828847 0.5404207162170936 0.04449901207549413 0.010240704069166323 1.1566631197470704e-11 10.936793111695334 -0.24574768078921683 S(ph)RSESDSEK ddPTM_A549_PD325901_60min_R1 1 SRSESDSEK 9 1 Q9HCI7-2;Q9HCI7 Q9HCI7-2 MSL2 E3 ubiquitin-protein ligase MSL2 1 S(0.568)RS(0.382)ES(0.045)DS(0.004)EK 53.448 0.0060888999999999995 4377800.0 2021.7 2002.6 1497.6 1729.0 1612.4 1272.7 1442.3 1429.0 1402.4 1840.8 2322.7 True False 2226.941495703122 2171.366130125311 1599.2361418003823 1835.796403156096 1499.1505864780256 1262.3355531623395 1497.187515756844 1400.4974739711865 1343.462004977368 1724.5715738471072 2037.0226248084223 1.0932335598936027 1.0659509146735782 0.7850851150712119 0.9012155195520957 0.735951858472371 0.6196963832353406 0.7349881623910051 0.6875218060491107 0.6595223777171929 0.846613853397578 1.0 10.992246288784074 -5.748140489696405 7.606347408222074 0.7989848481008904 1.081632196482761 0.5388446293071282 0.1069211813337843 0.11976604874766913 36.76576870650498 0.02015881836481336 0.07367520437783986 1.78590975837807e-06 5.748140489696405 0.28264734838187067 S(ph)RSESDSEKVQPLPISTIIR ddPTM_A549_MK2206_60min_R1 1 SRSESDSEKVQPLPISTIIR 20 2 Q9HCI7-2;Q9HCI7 Q9HCI7-2 MSL2 E3 ubiquitin-protein ligase MSL2 1 S(0.455)RS(0.455)ES(0.089)DS(0.001)EKVQPLPISTIIR 59.428999999999995 0.00063964 1102400.0 370.05 316.81 383.39 478.68 561.63 331.29 297.83 267.08 357.31 627.34 592.93 True False 432.5053931461242 332.9342757950817 437.76046699222417 595.9566214887615 479.01497098676214 366.3468879074958 351.94185582603615 304.93940789819624 276.3798555068222 485.62345829344775 445.6891169644951 0.9704194620946485 0.7470101088907769 0.9822103576899712 1.3371576706824482 1.0747737666318693 0.8219785360760336 0.7896577287393645 0.6841975634834463 0.620118026190977 1.0896013382622802 1.0 8.799893922784868 -7.306055354218591 7.281025174624457 0.8022890080675732 1.0221928361801982 0.20463884823858502 0.1786913393125362 0.30119031600974616 42.660123915926654 0.029449127422167258 0.04738684772296706 4.942476872498555e-08 7.306055354218591 0.219903828112625 S(ph)RSESDSEKVQPLPISTIIR ddPTM_A549_PD325901_60min_R1 1 SRSESDSEKVQPLPISTIIR 20 2 Q9HCI7-2;Q9HCI7 Q9HCI7-2 MSL2 E3 ubiquitin-protein ligase MSL2 1 S(0.33)RS(0.33)ES(0.33)DS(0.009)EKVQPLPISTIIR 63.45399999999999 0.00040706 3418100.0 512.97 582.23 864.94 675.76 746.4 831.34 868.45 707.24 849.2 954.04 997.54 True False 565.0463367714451 631.2965654363624 923.6400297067464 717.5001604376885 693.9754389402118 824.5698426698981 901.4993399840747 693.1335433809527 813.5110771725487 893.8017515825154 874.848903927065 0.6458787731630424 0.7216063969475953 1.0557709171957186 0.8201418064501633 0.7932517670480703 0.9425282914209852 1.0304629015792097 0.79228943451787 0.9298875194571542 1.021664138310483 1.0 9.772890058858783 -4.427179441436511 0.602450024606512 0.9504576985399691 7.125555983546603e-94 0.44265468367607386 0.09878916189607503 5.291928773515006 0.6326532632437334 0.016473328755194427 4.4108522119749205 3.73956045496295e-05 4.427179441436511 -0.9504576985399691 S(ph)RSESDVSSVEQDSFIEPYATTSQLRPR ddPTM_A549_MK2206_60min_R1 2 SRSESDVSSVEQDSFIEPYATTSQLRPR 28 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 S(0.444)RS(0.444)ES(0.112)DVSSVEQDSFIEPYATTSQLRPR;S(0.494)RS(0.494)ES(0.013)DVSSVEQDSFIEPYATTSQLRPR 215.43 1.4663999999999994e-90 27002000.0 2483.1000000000004 2978.1 1844.8000000000002 1984.21 3455.7 2507.1000000000004 2188.7 2390.8 3170.8999999999996 3595.8 3550.9 True False 2902.1865740336216 3129.6725695064315 2106.4203800497025 2470.341539074571 2947.37110773811 2772.3996579217087 2586.358459008313 2729.703221517926 2452.6962128867995 2783.506282608441 2669.113530145592 1.0873222668334068 1.1725513111972115 0.7891835084043067 0.9255288361375251 1.1042509336713526 1.0386967907545255 0.9689952974264211 1.0227003050593464 0.9189179048344985 1.042857956835058 1.0 11.382144956157184 -8.735431412966815 24.75972396601766 0.9617112185743029 1.0108964874552886 0.0 0.09985558264140217 528.9629945093521 503575.37489094026 0.0169128285584138 0.019174111244513254 1.8389443507801153e-09 8.735431412966815 0.04918526888098573 S(ph)RSESDVSSVEQDSFIEPYATTSQLRPR ddPTM_A549_PD325901_60min_R1 2 SRSESDVSSVEQDSFIEPYATTSQLRPR 28 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 S(0.494)RS(0.494)ES(0.012)DVSSVEQDSFIEPYATTSQLRPR;S(0.494)RS(0.494)ES(0.011)DVSSVEQDSFIEPYATTSQLRPR 253.88 1.6030999999999996e-138 52690000.0 3216.5 3516.4 3052.7 3075.5 4766.2 3489.2 3501.8 3490.7 4123.9 4290.9 4894.0 True False 3543.0367121378504 3812.7393688068746 3259.8745793763565 3265.46665003272 4431.438554497371 3460.7851120405744 3635.062915258487 3421.075250098824 3950.586824248554 4019.971841710426 4292.069025622082 0.8254845602405779 0.8883220064836365 0.7595112193946782 0.7608141039995112 1.0324714090205223 0.8063209355164032 0.8469255488573205 0.7970690195512365 0.9204387908640321 0.9366046579662779 1.0 12.067457562555663 -9.334600622652077 0.9736839884582181 0.9837062401651414 0.8409165348490764 0.29561806014046166 0.07447987730611379 0.33486513783550864 0.6701553186883064 0.019578823366075075 0.015323576862156725 4.6280642270772275e-10 9.334600622652077 -0.14278970531606505 S(ph)RSESETSTMAAK ddPTM_A549_MK2206_60min_R1 2 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.434)RS(0.328)ES(0.078)ET(0.111)S(0.032)T(0.016)MAAK;S(0.499)RS(0.499)ES(0.002)ETSTMAAK 195.77 7.0986e-31 109583000.0 3746.8 4124.55 4200.66 3884.5 6217.3 4714.5 4729.7 5415.2 6798.2 7122.7 6754.6 True False 4379.168239534924 4334.471977622561 4796.376752851032 4836.202674381832 5302.743406007509 5213.385260768179 5589.025267771562 6182.821183354475 5258.418554494636 5513.677123070009 5077.246402523703 0.8625085119678668 0.8537052634412351 0.9446807132438831 0.9525247133914838 1.0444132479707346 1.0268135220257986 1.1007985086155112 1.2177508620186785 1.0356831513792355 1.0859581524996251 1.0 12.309830561486157 -6.237243414732579 1.272378526892626 1.041873857511337 0.8526239160767558 0.6359085437948957 0.06119320366703916 0.3109669761700436 0.8953568353361235 0.010248367518348027 0.04747428092620744 5.79104027409054e-07 6.237243414732579 -0.1892499414345813 S(ph)RSESETSTMAAK ddPTM_A549_PD325901_60min_R1 4 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.494)RS(0.494)ES(0.012)ET(0.001)STMAAK;S(0.494)RS(0.494)ES(0.011)ETSTMAAK;S(0.714)RS(0.284)ES(0.002)ETSTMAAK;S(0.699)RS(0.299)ES(0.003)ETSTMAAK 139.81 8.803e-10 565983000.0 19374.800000000003 19484.199999999997 19190.199999999997 20018.8 22045.1 21394.1 20453.5 20934.8 21078.800000000003 22867.2 23328.0 True False 21341.715433026082 21126.20191380584 20492.562372047094 21255.31581000652 20496.728227466323 21219.873542791243 21231.86913508465 20517.2389909671 20192.93133950153 21423.36108945923 20458.803888375962 1.0431555798407042 1.0326215564248638 1.001650071228764 1.0389324774789552 1.0018536928794703 1.0372001050778779 1.0377864341887513 1.0028562325984434 0.9870044920355538 1.0471463144348971 1.0 14.320434180803211 -8.427867460112841 4.909920572236266 0.993895799545276 1.0265107489344607 0.0 0.0210270255459107 0.12343141941378316 4.867222524486969 0.0022079144426344036 0.002665283879816458 3.733640852929437e-09 8.427867460112841 0.032614949389184744 S(ph)RSFDYNYR ddPTM_A549_MK2206_60min_R1 5 SRSFDYNYR 9 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.5)RS(0.5)FDYNYR;S(0.866)RS(0.134)FDYNYR;S(0.959)RS(0.04)FDYNYR;S(0.5)RS(0.5)FDYNYR;S(0.939)RS(0.061)FDYNYR 120.55 3.8493e-05 84202100.0 6249.0199999999995 6072.299999999999 5046.11 4341.79 8773.9 6591.669999999999 6228.780000000001 6703.27 8917.5 7919.9 8123.2 True False 7303.7018021294225 6381.354133109668 5761.724275787402 5405.528744910362 7483.270932715045 7289.196144203576 7360.46869936574 7653.47905040341 6897.700488321307 6130.789089390568 6105.985251085264 1.1961545109908804 1.0450981898417557 0.9436190948485056 0.8852836229746207 1.2255632178910005 1.1937788652384986 1.2054514376787115 1.2534388367615361 1.1296621601068106 1.0040622171992464 1.0 12.576008389403006 -5.248140770811044 22.5461617502737 1.0827774047004801 1.1961547924329525 0.06279348106407512 0.11751915624426322 1324.510154893627 2245382.747578027 0.017220568367719548 0.40097892659296214 5.6475388763969244e-06 5.248140770811044 0.11337738773247241 S(ph)RSFDYNYR ddPTM_A549_PD325901_60min_R1 3 SRSFDYNYR 9 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.962)RS(0.038)FDYNYR;S(0.704)RS(0.296)FDYNYR;S(0.859)RS(0.141)FDYNYR 140.14 1.156e-05 94591000.0 4630.2 5226.3 5242.5 4287.9 4924.9 4329.200000000001 4434.9 4407.0 4679.3 5687.4 5584.4 True False 5100.254495426912 5666.738642701445 5598.287575713483 4552.753844472539 4578.992013982652 4293.944430541686 4603.672546370399 4319.098927775382 4482.6452937040785 5328.296593382245 4897.554202428271 1.041388065271057 1.157054809090587 1.1430782272787874 0.9295974391085297 0.9349548416865561 0.8767528143767541 0.9399942003883975 0.8818889489030907 0.9152824263755007 1.0879505102241454 1.0 12.257845743901607 -6.263759040276616 24.998147653718913 0.9428256984240011 1.118161817351785 0.5973567595596089 0.06137834732747774 83.0675980759824 895194.6106055491 0.007142338511834085 0.017359792377769332 5.448048432191528e-07 6.263759040276616 0.175336118927784 S(ph)RSFTLDDESLK ddPTM_A549_MK2206_60min_R1 2 SRSFTLDDESLK 12 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.333)RS(0.333)FT(0.333)LDDESLK;S(0.471)RS(0.471)FT(0.054)LDDES(0.003)LK 53.169 0.0064928 5602000.0 1594.58 1783.75 1655.8600000000001 1367.3 2188.3900000000003 1706.83 1745.32 1640.0900000000001 2435.0 2336.5 2306.7 True False 1863.7061202619836 1874.5352559877435 1890.685846980216 1702.2885613804283 1866.4807299427039 1887.445617697941 2062.422052211992 1872.5777800649712 1883.4763878959786 1808.6830272302743 1733.8827283186881 1.0748743786548833 1.0811199773617004 1.0904346736376898 0.9817783714998441 1.076474607802682 1.088565902913261 1.189481859717169 1.0799910221614428 1.0862766882292834 1.0431403448975576 1.0 10.759790609407272 -10.556365664759957 0.8948172972110112 1.0009339973094489 1.0830093515069663 0.19179498413680163 0.04612169988467647 0.5713678066236932 0.8315606287198561 0.02943780136914234 0.008586704150866669 2.7773738058556032e-11 10.556365664759957 0.08207535419751744 S(ph)RSGALEPPTSAPPTLALVPGGAAAR ddPTM_A549_MK2206_60min_R1 2 SRSGALEPPTSAPPTLALVPGGAAAR 26 1 Q9P244 Q9P244 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 1 S(0.485)RS(0.485)GALEPPT(0.015)S(0.015)APPTLALVPGGAAAR;S(0.497)RS(0.497)GALEPPT(0.003)S(0.003)APPTLALVPGGAAAR 56.728 0.00092855 5818900.0 2428.0 2619.2 3361.0 3026.3999999999996 3915.7000000000003 3326.9 3764.1000000000004 3191.3999999999996 5540.8 4024.6 4050.8 True False 2837.7870410992814 2752.506092492275 3837.6403389782367 3767.8681358602594 3339.705717096425 3678.9503497825117 4447.988246700408 3643.790723252596 4285.8176468394395 3115.440064793908 3044.87456360747 0.9319881597149152 0.9039801262719979 1.2603607336886558 1.2374460941327612 1.0968286697300424 1.2082436477855458 1.4608116537420097 1.1966964967304101 1.4075514630598576 1.0231751751056812 1.0 11.572167080876145 -5.757791560725099 24.9764551484654 1.2152852514342434 0.9179840161735445 0.4133772119957122 0.13411181943817704 76.0570336445239 520734.39075818215 0.022078743246456898 0.07929865258419795 1.746660259917133e-06 5.757791560725099 -0.29730123526069885 S(ph)RSGALEPPTSAPPTLALVPGGAAAR ddPTM_A549_PD325901_60min_R1 2 SRSGALEPPTSAPPTLALVPGGAAAR 26 1 Q9P244 Q9P244 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 1 S(0.5)RS(0.5)GALEPPTSAPPTLALVPGGAAAR;S(0.497)RS(0.497)GALEPPT(0.003)S(0.003)APPTLALVPGGAAAR 96.219 1.8403e-09 20524100.0 5660.6 5851.4 6534.6 6288.9 7106.799999999999 7176.4 6327.9 7091.0 6062.0 6730.1 6874.5 True False 6235.259944886528 6344.518013490083 6978.07725174198 6677.351069871817 6607.642885129013 7117.95777772784 6568.711697259748 6949.564442218117 5807.235221172849 6305.16033743395 6028.980081045977 1.0342147197482137 1.0523368676297504 1.157422508938086 1.107542400225239 1.095980214945849 1.180623867062592 1.08952287268465 1.152693216563493 0.9632201704281204 1.0458087856777356 1.0 12.557698247571743 -8.767925494422878 24.99547898481009 0.9826317393619047 1.109814626405278 0.49725201237481953 0.04613833059743748 66.55612404673955 256486.05355353825 0.007349820659363052 0.007914573831591927 1.7063751018105953e-09 8.767925494422878 0.12718288704337322 S(ph)RSGEGEVSGLMR ddPTM_A549_MK2206_60min_R1 5 SRSGEGEVSGLMR 13 1 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 S(0.807)RS(0.193)GEGEVSGLMR;S(0.5)RS(0.5)GEGEVSGLMR;S(0.5)RS(0.5)GEGEVSGLMR;S(0.87)RS(0.13)GEGEVSGLMR;S(0.498)RS(0.498)GEGEVS(0.005)GLMR 129.84 1.0321e-08 304405100.0 9761.6 12327.43 10774.130000000001 10320.37 13980.56 11375.0 9735.73 11269.130000000001 16508.199999999997 17294.2 15140.1 True False 11409.11943179356 12954.843532289262 12302.063643378628 12848.861113299017 11924.038143935844 12578.694949886101 11504.586119669657 12866.563687763224 12769.119058178381 13387.428208656458 11380.395324497245 1.002523999077122 1.1383474091100232 1.0809873728109791 1.129034690529667 1.0477701172883127 1.105295079056649 1.0109126960559165 1.1305902230010303 1.1220277234738756 1.1763588018633155 1.0 13.474263053431702 -10.914173053556793 1.166647378618506 0.9999707555292936 1.0895037183322946 0.0 0.06880414136791281 0.41355287004135904 0.9994328261456868 0.02969947466305362 0.007034025523727902 1.2185039642429156e-11 10.914173053556793 0.08953296280300105 S(ph)RSGEGEVSGLMR ddPTM_A549_PD325901_60min_R1 6 SRSGEGEVSGLMR 13 1 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 S(0.5)RS(0.5)GEGEVSGLMR;S(0.835)RS(0.165)GEGEVSGLMR;S(0.5)RS(0.5)GEGEVSGLMR;S(0.5)RS(0.5)GEGEVSGLMR;S(0.5)RS(0.5)GEGEVSGLMR;S(0.931)RS(0.069)GEGEVSGLMR 148.19 3.4475e-13 456415000.0 17116.2 19542.239999999998 19837.199999999997 18858.1 20394.4 20909.8 19462.0 21477.5 21541.7 21562.0 22687.3 True False 18853.82402371954 21189.13314829723 21183.47168277415 20022.92200714746 18961.967700860478 20739.51752142209 20202.63706001503 21049.114413727202 20636.377262279657 20200.571640206053 19896.905926644034 0.9475756729830189 1.0649461391845236 1.0646615991890112 1.006333451088728 0.9530108736890807 1.0423488756435095 1.0153657626214934 1.0579089277162557 1.0371651420759542 1.015261956541463 1.0 14.280256481105242 -11.02045854892028 1.3675912299513526 1.0002538529766656 1.024328259269165 0.006918682105257701 0.038698313217493986 1.1765275867152265 3.985893333902248 0.025332330234108517 0.005989373718694281 9.539847912297333e-12 11.02045854892028 0.02407440629249935 S(ph)RSGS(ph)QGRTDSVEK ddPTM_A549_PD325901_60min_R1 2 SRSGSQGRTDSVEK 14 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 2 S(0.815)RS(0.246)GS(0.927)QGRT(0.006)DS(0.005)VEK;S(0.847)RS(0.267)GS(0.844)QGRT(0.02)DS(0.022)VEK 66.893 0.0033123000000000007 31699000.0 2718.5 3621.5 4129.2 3471.0 3998.1 4353.5 3497.0 3813.0 3763.8 3461.1 4596.5 True False 2994.4801187460735 3926.696514655355 4409.432342896729 3685.3957867870486 3717.2872486962247 4318.046539398326 3630.080248631825 3736.946723759366 3605.620574967071 3242.56555532498 4031.1596396142018 0.7428334242383557 0.974086085817022 1.0938371925451034 0.9142271991837455 0.9221384368325299 1.0711673377965205 0.900505207722123 0.9270153151555681 0.8944375557679833 0.8043753771148856 1.0 11.976979201743253 -5.2588520087567785 24.463504121993804 0.9584015175082449 0.742833320868827 0.359413982363889 0.07888673826046065 120.70768466297216 1141192.9974264316 0.009064596569172547 0.0853294519877459 5.509954229580498e-06 5.2588520087567785 -0.21556819663941784 S(ph)RSGS(ph)SPGLR ddPTM_A549_PD325901_60min_R1 1 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.937)RS(0.093)GS(0.8)S(0.17)PGLR 59.248000000000005 0.0027872 6342000.0 1509.1 1585.8 1129.4 1274.7 1904.6 1535.0 1437.0 1375.6 1036.4 1655.0 1990.2 True False 1662.3027210592968 1719.4409313655833 1206.047875633916 1353.435323946255 1770.8274665133 1522.4994689276284 1491.685821356572 1348.1625788626768 992.8437121780839 1550.503017555932 1745.4180169172605 0.9523808651839397 0.9851169832671043 0.690979389432467 0.7754218822243388 1.0145578018272765 0.872283575722824 0.8546295540085992 0.772400975465916 0.5688286144379524 0.8883276112242812 1.0 10.76935687909809 -8.112493102471266 4.221997364150095 0.7891137460993757 0.878012454053486 0.060188788341263844 0.12946357600931957 0.6180694819236858 18.682123976948596 0.02835800668256952 0.037125623444289976 7.71803773388534e-09 8.112493102471266 0.08889870795411037 S(ph)RSGSESEEAELSLSLAR ddPTM_A549_MK2206_60min_R1 2 SRSGSESEEAELSLSLAR 18 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 S(0.316)RS(0.316)GS(0.316)ES(0.052)EEAELSLSLAR;S(0.333)RS(0.333)GS(0.333)ES(0.001)EEAELSLSLAR 91.729 1.4103e-06 2976400.0 489.6 815.74 656.12 629.06 847.6899999999999 476.56 391.9 420.36 1018.75 779.72 1066.1100000000001 True False 572.2325104292458 857.2576816927493 749.1676820024995 783.1797282395765 722.9959239281528 526.9892628850741 463.10315716423327 479.94731729850935 788.0047516094569 603.5807104609414 801.365463860857 0.7140718389239245 1.0697462273487706 0.9348639488319394 0.9773065643062976 0.9022049945163202 0.6576141431727293 0.577892582159796 0.5989119059189251 0.9833275666921929 0.7531903203726567 1.0 9.646316525609938 -8.949483070910677 24.9983418074977 0.9926450051818408 0.8124905986766845 0.017811740594338543 0.16735546514784275 125.17228834851262 61941.65308447556 0.028696629404830247 0.030546067833556845 1.123354757940537e-09 8.949483070910677 -0.18015440650515635 S(ph)RSGSESEEAELSLSLAR ddPTM_A549_PD325901_60min_R1 1 SRSGSESEEAELSLSLAR 18 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 S(0.333)RS(0.333)GS(0.333)ESEEAELSLSLAR 121.47 7.3633e-11 3774700.0 563.98 836.16 646.08 705.96 817.42 794.67 785.27 681.57 691.7 710.8 737.89 True False 621.2348344198678 906.6261377037748 689.926873994653 749.5655458485122 760.0072391459114 788.1984709919986 815.1538795662318 667.9755516686789 662.6302544515446 665.9199666941133 647.1342078701024 0.9599783582211229 1.4009862663383723 1.066126416443651 1.158284536241006 1.1744198187997283 1.217983010952516 1.2596365168967478 1.0322055974558526 1.0239456458845593 1.0290291543787184 1.0 9.337921130663169 -8.36698814572311 6.244128953999082 1.012300028145 1.1816593077705568 0.33937395345407406 0.10414494885886161 0.17268127786167864 8.804065672156867 0.015234083041544628 0.018434850135417104 4.295481513283862e-09 8.36698814572311 0.16935927962555675 S(ph)RSGSSPGLR ddPTM_A549_PD325901_60min_R1 2 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.995)RS(0.005)GSSPGLR;S(0.764)RS(0.16)GS(0.034)S(0.042)PGLR 72.705 0.00055921 58013000.0 9717.5 9665.3 9225.3 9576.8 10009.7 11629.8 8222.6 10808.8 10948.9 11401.2 13821.3 True False 10704.013446354593 10479.828751373303 9851.384334235498 10168.33718550914 9306.65320359036 11535.090764647899 8535.515542579371 10593.210004660434 10488.755808825377 10681.326286259038 12121.367720439428 0.8830697734138658 0.8645747734970444 0.8127287746269578 0.8388770491932996 0.7677890332373294 0.951632772034221 0.7041709928646516 0.8739286068186706 0.8653112462827862 0.8811981067324485 1.0 13.565264874743763 -10.213628935255016 0.6241340532868699 1.0039211441502236 0.834246204226747 0.1783392937244095 0.06949843521722665 0.4877948241281716 0.34955266816709424 0.041449518794185854 0.012632356619195453 6.114642418124553e-11 10.213628935255016 -0.1696749399234766 S(ph)RSLGPGAGPR ddPTM_A549_MK2206_60min_R1 1 SRSLGPGAGPR 11 1 P78549-3;P78549-2;P78549;H3BUV2 P78549-3 NTHL1 Endonuclease III-like protein 1 1 S(0.628)RS(0.372)LGPGAGPR 114.7 6.2201e-06 20279000.0 955.55 1599.8 1792.6 1099.1 1707.1 1442.0 869.4 1121.1 2199.0 1823.2 2353.9 True False 1116.8234790454783 1681.2229867017181 2046.8176351241855 1368.3795493404741 1455.987851381696 1594.5914828778684 1027.3587263041188 1280.0193582247568 1700.93001108142 1411.3378537326075 1769.3616656649594 0.6312013539785576 0.9501861712765676 1.1568113375819933 0.7733747011107598 0.8228887737513564 0.9012241611319136 0.5806380607426679 0.7234356791287786 0.9613241001478228 0.7976536855749049 1.0 10.789013256337284 -8.898101863338276 7.651262204330013 0.983032017124779 0.8269607655451396 0.03635430436710663 0.15863046540386147 0.3001390562827924 20.11926224670107 0.026558082102023744 0.02819366008253892 1.2644397396061292e-09 8.898101863338276 -0.1560712515796393 S(ph)RSLGPGAGPR ddPTM_A549_PD325901_60min_R1 1 SRSLGPGAGPR 11 1 P78549-3;P78549-2;P78549;H3BUV2 P78549-3 NTHL1 Endonuclease III-like protein 1 1 S(0.5)RS(0.5)LGPGAGPR 109.83 2.6389e-05 13397000.0 4404.0 3902.4 3974.4 4118.2 4081.3 3639.6 3477.7 4248.2 4275.1 4335.7 4488.2 True False 4851.090837946555 4231.2689434739905 4244.126684008708 4372.571860889207 3794.6435677206414 3609.9603043055354 3610.0457765704596 4163.466318351571 4095.432414060719 4061.9431620648106 3936.179853043939 1.232436275541397 1.0749683961219028 1.0782349492304388 1.1108668872200531 0.9640422209839207 0.9171228041101499 0.917144518632381 1.0577429065218822 1.0404586596554084 1.031950600256138 1.0 11.942580426875452 -4.2718873591296225 0.726783060173584 1.007714035038198 1.9543189400051362 0.6006037606165593 0.054783839862109954 5.490991837928855 0.7081994313419326 0.009360256404187578 5.978015714333895 5.34703024764783e-05 4.2718873591296225 0.9466049049669383 S(ph)RSLSNSNPDISGTPTSPDDEVR ddPTM_A549_MK2206_60min_R1 1 SRSLSNSNPDISGTPTSPDDEVR 23 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.421)RS(0.421)LS(0.126)NS(0.031)NPDISGTPTSPDDEVR 83.557 8.8315e-06 4625600.0 1121.7 1477.0 1107.6 1038.2 1908.3 1153.6 1208.6 1065.2 2065.4 1698.7 1925.6 True False 1311.0155370679838 1552.172991222927 1264.6743348563805 1292.5590466065685 1627.5915979097235 1275.6731863022953 1428.1869756282022 1216.1953620381862 1597.5901977660576 1314.9624902016135 1447.4203761436113 0.9057600394993378 1.0723719361740713 0.8737436308765223 0.8930087401770295 1.124477466764801 0.8813425645568808 0.9867119457260557 0.8402502701243697 1.103749970704811 0.9084869274157189 1.0 10.49926827114788 -8.784990109058347 24.999916781545114 1.0489930357503128 0.9521551527117952 0.008039067039947168 0.09525954039772792 259.46221608583534 275426.8666978358 0.014584470908822396 0.015530654194367227 1.6406271376220303e-09 8.784990109058347 -0.09683788303851759 S(ph)RSLSSSGTK ddPTM_A549_MK2206_60min_R1 1 SRSLSSSGTK 10 1 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 S(0.601)RS(0.398)LS(0.001)SSGTK 59.227 0.0026816999999999995 16259000.0 1483.0 1803.9 1744.4 1809.9 2374.4 2093.3 2316.9 2099.5 3746.0 3569.4 3779.8 True False 1733.2941441310693 1895.7108049201333 1991.7821503462176 2253.325581249499 2025.1289053486603 2314.8116165799183 2737.850739560633 2397.1105544490906 2897.5369811327837 2763.070060944036 2841.171342826973 0.6100632221661214 0.6672286096740283 0.7010426018039408 0.7930973916579892 0.7127795760933064 0.8147384783476925 0.9636345046464054 0.8437050304977239 1.0198388733041797 0.9725108863708212 1.0 11.472270123578769 -7.399954847545472 0.5476977155664403 1.0164650903383246 0.6311336561889127 0.8593025067886256 0.051831592243868664 0.2058791762891061 0.11857146545427308 0.01189857121042082 0.03344761202618753 3.9814856286017076e-08 7.399954847545472 -0.38533143414941184 S(ph)RSMLEVPR ddPTM_A549_MK2206_60min_R1 1 SRSMLEVPR 9 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 S(0.935)RS(0.065)MLEVPR 86.31299999999999 0.00033555 6642400.0 406.13 590.28 421.1 339.51 709.86 553.62 454.47 522.78 828.09 777.99 750.93 True False 474.67481507481534 620.3227307102701 480.8183120332447 422.68996524118285 605.4405343458561 612.2037009367865 537.0413162450346 596.8856659466041 640.5289371880004 602.241518662479 564.4533563863328 0.8409460404553434 1.0989796122067848 0.8518300167643168 0.7488483511680604 1.0726139325699575 1.0845957314456496 0.9514361287232097 1.0574579089544354 1.1347774443024106 1.0669464745821844 1.0 9.140710558566784 -6.804036676384166 24.99606589907909 1.0580345796036754 0.8980441229886017 0.4400447932362418 0.09027682850933114 107.30156990089722 62964.18807682926 0.01371945149976469 0.025927469442769663 1.5702301920163625e-07 6.804036676384166 -0.15999045661507372 S(ph)RSMLEVPR ddPTM_A549_PD325901_60min_R1 1 SRSMLEVPR 9 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 S(0.5)RS(0.5)MLEVPR 66.435 0.0012216 8375500.0 1411.3 1083.6 1084.2 1476.4 1395.1 1712.4 1226.3 1273.3 1545.5 1698.7 1509.6 True False 1554.5741370558526 1174.9187748945308 1157.780331824236 1567.593874852319 1297.1129888337214 1698.4547821444105 1272.9675175571076 1247.9030326154732 1480.548009621023 1591.4437920980454 1323.928770142848 1.174212821803184 0.8874486312188536 0.8745034913768926 1.1840469896905257 0.9797452990569627 1.2828898506081654 0.961507557102002 0.9425756587197877 1.1182988413049415 1.2020614915153882 1.0 10.370609789189357 -6.249775495861582 24.970717429793456 1.0597927442230377 0.9695943658062287 0.09659137818962449 0.1278906873806487 1341.5337045158553 2872026.633505756 0.015912771673931816 0.041742623292370176 5.626320969981797e-07 6.249775495861582 -0.090198378416809 S(ph)RSPAPPADK ddPTM_A549_MK2206_60min_R1 2 SRSPAPPADK 10 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.5)RS(0.5)PAPPADK;S(0.5)RS(0.5)PAPPADK 59.248000000000005 0.0026704999999999997 48487000.0 3268.2 3393.1000000000004 3192.8999999999996 3159.7 3618.6 3223.6 3261.0 3336.2 4477.3 4886.4 4675.6 True False 3819.7922601814957 3565.7942968981138 3645.701231277479 3933.8266418443236 3086.308733530433 3564.719212347502 3853.4814889322884 3809.1165666839984 3463.198698778916 3782.5588462478145 3514.519480004711 1.0868604604167325 1.0145894245814036 1.0373256577518222 1.119307109898008 0.8781595182753962 1.0142835265612822 1.096446188691241 1.083822863511029 0.9853974970069802 1.0762662912435312 1.0 11.779111736064106 -2.000000046556082 0.13021617206985198 0.9812083671772024 1.236440793114825 0.0 0.06786269126651859 147.0425988626149 1.2441767582213483 0.17702826504290622 6.9424744830189935 0.009999998928006652 2.000000046556082 0.2552324259376225 S(ph)RSPAPPADK ddPTM_A549_PD325901_60min_R1 1 SRSPAPPADK 10 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.591)RS(0.409)PAPPADK 58.885 0.0028721999999999997 27878000.0 4814.1 4149.7 4479.7 4236.0 5084.4 4800.3 4655.2 4389.9 4688.0 5412.1 6072.1 True False 5302.823888046889 4499.4097823734155 4783.719380624453 4497.6480993459945 4727.28928422778 4761.207948334391 4832.356183423185 4302.34000069007 4490.9796629591465 5070.379082365237 5325.270194213295 0.99578494511118 0.8449167118811547 0.8983054767479558 0.844585896173562 0.8877088132287989 0.8940781922217126 0.9074386852096753 0.8079101799126001 0.8433336711889792 0.9521355532109834 1.0 12.378639011495844 -10.827303518426595 1.0840376574644923 0.9997153308232091 0.8762389114211263 0.3526829152403006 0.04844531967678204 0.33233853061931523 0.6959208250753064 0.03078486027773502 0.007673276999779296 1.4883205611411703e-11 10.827303518426595 -0.12347641940208276 S(ph)RSPAPPADKEAEKPVFFPAFAAEAQK ddPTM_A549_MK2206_60min_R1 2 SRSPAPPADKEAEKPVFFPAFAAEAQK 27 3 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8 C9J0Q5 NCOR2 1 S(0.6)RS(0.4)PAPPADKEAEKPVFFPAFAAEAQK;S(0.573)RS(0.427)PAPPADKEAEKPVFFPAFAAEAQK 218.46 3.5751999999999993e-82 106777000.0 6335.200000000001 6852.8 7099.4 5880.5 8772.900000000001 7525.5 6587.200000000001 6813.9 10007.2 9878.5 10437.8 True False 7404.426879230719 7201.57824932463 8106.201672877742 7321.222763985679 7482.418031390363 8321.843414977391 7784.00897390211 7779.791191693575 7740.585178214634 7646.93998908379 7845.806191375043 0.9437432812666803 0.9178888789327196 1.0331891299824552 0.9331383653134279 0.9536837705239066 1.0606740992564485 0.9921235350497355 0.9915859507523854 0.9865888844825048 0.9746531844605252 1.0 12.937705982784777 S(ph)RSPAPPADKEAEKPVFFPAFAAEAQK ddPTM_A549_PD325901_60min_R1 3 SRSPAPPADKEAEKPVFFPAFAAEAQK 27 3 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8 C9J0Q5 NCOR2 1 S(0.5)RS(0.5)PAPPADKEAEKPVFFPAFAAEAQK;S(0.559)RS(0.441)PAPPADKEAEKPVFFPAFAAEAQK;S(0.574)RS(0.426)PAPPADKEAEKPVFFPAFAAEAQK 162.2 1.1304000000000001e-41 373789000.0 10642.6 10464.1 10891.0 10775.1 12410.1 12130.8 11977.7 13355.5 12853.599999999999 12089.7 12998.400000000001 True False 11723.028917331974 11345.946430762147 11630.128752903296 11440.65345497239 11538.457388520796 12032.010786753925 12433.517927948938 13089.11407531293 12313.407891598055 11326.354278758894 11399.679203646532 1.0283648081589882 0.9952864662308044 1.020215441604975 1.0035943337171058 1.0121738675619811 1.0554692436349544 1.0906901594188458 1.1482002117327985 1.080153894827079 0.9935678080428629 1.0 13.476705605885066 -7.2579524689309025 18.856287606025717 1.0534320788020786 1.0109999890636132 0.25639381416431517 0.04069362855590145 15.360556755765614 83052.89222114095 0.007092578391804563 0.011933270740039744 5.521378643333763e-08 7.2579524689309025 -0.04243208973846535 S(ph)RSPAPPADKEAFAAEAQK ddPTM_A549_MK2206_60min_R1 3 SRSPAPPADKEAFAAEAQK 19 2 Q9Y618;Q9Y618-4;Q9Y618-5 Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.59)RS(0.41)PAPPADKEAFAAEAQK;S(0.6)RS(0.4)PAPPADKEAFAAEAQK;S(0.5)RS(0.5)PAPPADKEAFAAEAQK 102.46 4.4420000000000003e-10 78320900.0 9396.3 11183.5 9675.5 9068.599999999999 12956.8 10463.9 9393.7 10597.8 14138.8 14560.599999999999 14915.3 True False 10982.165722521087 11752.69238140934 11047.63138940313 11290.407407104918 11050.871883769174 11571.182952625328 11100.413695977697 12100.070604401322 10936.384375024081 11271.350347224108 11211.41936866162 0.9795517731874925 1.0482787232329118 0.9853909684516562 1.0070453201192426 0.985680003609426 1.0320890310257527 0.9900988742786477 1.0792630448044498 0.9754683163127122 1.0053455299986376 1.0 13.452681314829555 S(ph)RSPAPPADKEAFAAEAQK ddPTM_A549_PD325901_60min_R1 2 SRSPAPPADKEAFAAEAQK 19 2 Q9Y618;Q9Y618-4;Q9Y618-5 Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.599)RS(0.401)PAPPADKEAFAAEAQK;S(0.616)RS(0.384)PAPPADKEAFAAEAQK 156.2 3.9034e-27 145112000.0 8510.7 9271.2 8741.9 8866.3 9819.5 7415.4 8787.2 9161.8 9411.5 8350.2 9878.7 True False 9374.699998753798 10052.516561279232 9335.17790331515 9413.951214171713 9129.812195435974 7355.011440968035 9121.601704540342 8979.060711706936 9015.967384372861 7822.966946945956 8663.68252623884 1.0820687358246994 1.160305277903959 1.0775069233022585 1.086599282194449 1.0538027181611762 0.8489474791686604 1.0528550275145296 1.0364023248212226 1.0406622538472632 0.9029609433694401 1.0 13.080764662163661 -6.841478858177778 3.739196681645208 1.01140179311158 1.1051669872912795 0.38829901367644615 0.06509555181219152 0.1882119931885981 5.153217353934739 0.008120173269549202 0.016210786941436746 1.4405261345685315e-07 6.841478858177778 0.09376519417969953 S(ph)RSPASAEAPGDSGER ddPTM_A549_MK2206_60min_R1 3 SRSPASAEAPGDSGER 16 1 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.592)RS(0.408)PASAEAPGDSGER;S(0.5)RS(0.5)PASAEAPGDSGER;S(0.492)RS(0.469)PAS(0.021)AEAPGDS(0.019)GER 87.352 3.7419e-06 44140300.0 1442.25 1924.6499999999999 1865.18 1846.6399999999999 1974.45 1934.79 1402.98 1767.74 2716.08 2670.7599999999998 2477.63 True False 1685.6665403729164 2022.6064641551848 2129.6905705014665 2299.066882898819 1684.0110205380986 2139.528193590341 1657.8833055327273 2018.3225584767006 2100.8922166885027 2067.4334610766223 1862.3660918906803 0.9051209360570037 1.0860412853102517 1.1435402415104097 1.2344870822711331 0.9042320024353993 1.1488225665762013 0.8902026904117646 1.083741036343554 1.1280769263553707 1.1101112021309176 1.0 10.862920981103775 -6.757716935832417 24.99981339532187 1.0482528102024518 1.095510673924984 0.05019749842900112 0.1076954629144871 288.05677018859404 1934550.0356793462 0.015085373769477321 0.03047400416103125 1.7469604146256684e-07 6.757716935832417 0.04725786372253227 S(ph)RSPASAEAPGDSGER ddPTM_A549_PD325901_60min_R1 2 SRSPASAEAPGDSGER 16 1 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.55)RS(0.435)PAS(0.014)AEAPGDSGER;S(0.5)RS(0.5)PASAEAPGDSGER 82.406 5.6519e-05 25051000.0 1288.45 1215.49 1314.9099999999999 1206.43 1541.9899999999998 1040.51 1485.86 1636.47 1634.43 1546.42 1519.66 True False 1419.2524954932414 1317.9236080625262 1404.1476997961681 1280.948441098675 1433.6859419767118 1032.0364315399906 1542.405215393791 1603.8293220641208 1565.740590983428 1448.778777286312 1332.7514539184422 1.0649041059534967 0.9888742602288518 1.0535705631142347 0.9611307774848338 1.0757339170492073 0.7743652640600655 1.1573089722460574 1.2033971655770312 1.1748181451087305 1.0870584856814347 1.0 10.380192040608234 S(ph)RSPAVNGENK ddPTM_A549_MK2206_60min_R1 2 SRSPAVNGENK 11 1 Q8IZD2-6;Q8IZD2-5;Q8IZD2-7;Q8IZD2;Q8IZD2-8;Q8IZD2-2 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 S(0.614)RS(0.386)PAVNGENK;S(0.5)RS(0.5)PAVNGENK 67.234 0.0013189 15307400.0 2607.6000000000004 2789.5 2611.2 2990.4 2745.8 2066.6 2080.67 1891.85 3163.9 4088.4 4305.3 True False 3047.699130300861 2931.4736350821627 2981.5074243201343 3723.048134244155 2341.896457339267 2285.2862403019444 2458.7008063712815 2160.025531047635 2447.2817017100974 3164.8276004828845 3236.175189764796 0.9417596241204625 0.9058451607792041 0.921305939724737 1.1504470295734344 0.7236618291698463 0.7061688895983528 0.7597551622506503 0.6674624840704699 0.7562265817531235 0.9779531128266585 1.0 11.660073994581893 -6.781219622314881 24.99926588729122 0.833011747536313 0.9703732967414967 0.3251914216797076 0.11886796924317648 324.12990833813 409651.1370321933 0.020664909397992686 0.03908986849257028 1.654932853822252e-07 6.781219622314881 0.13736154920518373 S(ph)RSPAYSR ddPTM_A549_MK2206_60min_R1 4 SRSPAYSR 8 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.849)RS(0.151)PAYSR;S(0.621)RS(0.379)PAYSR;S(0.795)RS(0.205)PAYSR;S(0.968)RS(0.032)PAYSR 61.958 0.0029524 142542800.0 3224.8199999999997 2970.69 2330.25 2578.66 3549.13 2694.24 2310.7799999999997 2217.14 3774.93 3826.17 3933.5899999999997 True False 3769.090776720669 3121.885432157099 2660.7144897066446 3210.4318157604475 3027.057678504082 2979.342688508229 2730.618814779196 2531.426384706481 2919.9143823245026 2961.835539609528 2956.7710414389 1.2747320383949843 1.0558428056836782 0.8998716682546443 1.085789792569838 1.0237714168869083 1.00763388397444 0.9235137846352662 0.856145555144024 0.9875348281629338 1.0017128475961277 1.0 11.52980681686924 -5.313319458064712 3.267646911018663 0.9841824721150385 1.2996172478971897 0.6657155989689998 0.06090753635705273 0.12712223663625355 2.199443476542781 0.008282893137364186 0.09318968276050414 4.860495461414393e-06 5.313319458064712 0.3154347757821512 S(ph)RSPAYSR ddPTM_A549_PD325901_60min_R1 2 SRSPAYSR 8 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.569)RS(0.431)PAYSR;S(0.5)RS(0.5)PAYSR 68.355 0.0021128 223124000.0 3169.8 3680.9 3409.8 3133.8 3490.3 3053.6 3475.6000000000004 3549.8 2982.8500000000004 4630.6 4159.5 True False 3491.5957625165734 3991.102361119674 3641.2095327931 3327.3677086238135 3245.1533688813247 3028.7324940178523 3607.8658599212977 3478.996454235773 2857.491187640291 4338.223125736861 3647.9078692429625 0.9571502043556741 1.094079813465227 0.9981637868361921 0.912130412250332 0.8895930174779276 0.8302656214413645 0.9890232947878767 0.9536963593759172 0.7833232883245201 1.1892359350175028 1.0 11.832853578236909 -6.210606336606873 3.574419079337998 0.9011890619985949 1.0292738829917651 0.0 0.1094910907212735 0.23903971903954285 6.236743013025375 0.012160698561612246 0.03408835478796891 6.157347485665553e-07 6.210606336606873 0.1280848209931702 S(ph)RSPDIQAK ddPTM_A549_MK2206_60min_R1 2 SRSPDIQAK 9 1 Q9HCS5 Q9HCS5 EPB41L4A Band 4.1-like protein 4A 1 S(0.5)RS(0.5)PDIQAK;S(0.5)RS(0.5)PDIQAK 57.836000000000006 0.0065674999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)RSPES(ph)QVIGENTK ddPTM_A549_PD325901_60min_R1 1 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.794)RS(0.371)PES(0.835)QVIGENTK 89.35799999999999 4.7932999999999995e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)RSPFSTTR ddPTM_A549_MK2206_60min_R1 2 SRSPFSTTR 9 1 K7EPI8;Q8NG27-2;Q8NG27-3;Q8NG27 K7EPI8 PJA1 E3 ubiquitin-protein ligase Praja-1 1 S(0.503)RS(0.496)PFSTTR;S(0.538)RS(0.41)PFS(0.035)T(0.013)T(0.004)R 74.267 0.00060404 34396100.0 3786.7 3706.5 3782.8 3406.4 4455.4 3984.6 3539.1 3386.9 4552.7 5187.0 5108.5 True False 4425.80238407358 3895.145018258482 4319.257921537299 4240.968152919106 3800.016562032689 4406.247727236588 4182.108659147585 3867.003446946237 3521.5207191679733 4015.2530974720453 3839.918462572518 1.1525771776696931 1.0143822209310573 1.1248306347222936 1.1044422412235047 0.9896086594210917 1.1474847109864574 1.0891139225768403 1.0070535311199222 0.9170821603354471 1.0456610307246117 1.0 11.90685996152227 -8.413572985683908 3.661618200134228 0.9608391012385107 1.086288214034395 0.37868170268585266 0.05669273901167723 0.1360383603727267 3.331274424429797 0.008730954616964097 0.010565494618231142 3.858575605647147e-09 8.413572985683908 0.12544911279588433 S(ph)RSPFSTTR ddPTM_A549_PD325901_60min_R1 2 SRSPFSTTR 9 1 K7EPI8;Q8NG27-2;Q8NG27-3;Q8NG27 K7EPI8 PJA1 E3 ubiquitin-protein ligase Praja-1 1 S(0.826)RS(0.174)PFSTTR;S(0.514)RS(0.485)PFS(0.001)TTR 55.578 0.0048454 81871000.0 4742.6 4905.9 5344.8 5651.6 6431.6 5775.5 5604.9 5369.299999999999 6238.0 6338.7 6636.2 True False 5224.0652606824115 5319.33741025755 5707.530268893355 6000.686496285135 5979.866603815468 5728.466242860923 5818.197536618968 5262.205099365636 5975.838553229338 5938.473400230693 5819.9894703378195 0.8976073388633093 0.9139771536302781 0.9806770781944496 1.031047655132068 1.0274703475483038 0.9842743310888525 0.9996921070513985 0.904160587606732 1.026778241384425 1.020358100387765 1.0 12.506800827640122 -5.795172145028074 3.168764522205332 1.004312530714882 0.9008220508014511 0.5243117055659315 0.033774673252308665 0.133585071256835 2.6899955954533117 0.0047817317534416615 0.019770544829955043 1.602610024497033e-06 5.795172145028074 -0.10349047991343086 S(ph)RSPGRPPK ddPTM_A549_MK2206_60min_R1 3 SRSPGRPPK 9 2 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.5)RS(0.5)PGRPPK;S(0.5)RS(0.5)PGRPPK;S(0.588)RS(0.412)PGRPPK 50.909 0.0089137 455590000.0 4264.6 4159.61 3903.44 3985.7 5171.1900000000005 4564.22 3595.15 4264.25 5581.799999999999 5790.700000000001 5878.0 True False 4984.360220540366 4371.316381869194 4457.006487587385 4962.1966789248745 4410.51480123397 5047.202730915968 4248.342218624632 4868.720496217926 4317.531212302984 4482.57684818419 4418.3303754529215 1.128109443384351 0.9893593304283163 1.0087535582104357 1.1230931725915134 0.9982311023497986 1.1423325786041023 0.9615266079302944 1.1019367232625368 0.9771861416905465 1.014540893792869 1.0 12.109285583212078 -8.784692530238772 24.975377359871512 0.9892267805363499 1.0527774719682041 0.15856857168001726 0.05971127262643159 247.60700100968677 265944.60415262415 0.009199855707363107 0.009797049901673733 1.6417516814705816e-09 8.784692530238772 0.06355069143185421 S(ph)RSPGRPPK ddPTM_A549_PD325901_60min_R1 1 SRSPGRPPK 9 2 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.549)RS(0.451)PGRPPK 56.258 0.0032771999999999996 176540000.0 701.44 881.43 923.97 602.79 946.19 982.18 817.79 690.86 938.63 862.25 931.49 True False 772.6496724271641 955.7111994788536 986.6761604829728 640.0229692645827 879.7328785782953 974.1814517207415 848.911445961859 677.0802553308143 899.1826452737508 807.8073878474945 816.9226352016178 0.945805195171845 1.169891931373627 1.2077963297460348 0.783456035719495 1.0768864035223797 1.192501480241531 1.0391576991281999 0.8288180865054741 1.1006949820307417 0.9888419698985649 1.0 9.67405564746531 -9.23899665153147 0.004417343993874992 4.102921333017381e-05 2.0794248879835564 0.005533407059785778 0.1330495479547379 42833.00840418375 108.20916988837577 25627.896517300844 25304.50730948461 5.767709103559519e-10 9.23899665153147 2.079383858770226 S(ph)RSPGSPVGEGTGSPPK ddPTM_A549_MK2206_60min_R1 1 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.365)RS(0.365)PGS(0.263)PVGEGT(0.006)GS(0.001)PPK 57.768 0.0020201 32121000.0 4046.9 4981.3 4757.2 3687.8 4716.7 4531.0 3892.8 3587.8 6175.8 6788.5 7134.2 True False 4729.917782794353 5234.826893147438 5431.8424934802915 4591.311165551631 4022.8796781747105 5010.46741256562 4600.071370780627 4096.3816371766825 4776.991160726067 5254.97313518199 5362.581246096674 0.8820225868348708 0.9761767053800395 1.0129156546456115 0.8561755906064014 0.7501759868165899 0.9343387414806348 0.8578091705610869 0.763882438174408 0.8908007061344112 0.9799335234327667 1.0 12.388711885074333 -10.327963265270164 0.9781969908116194 0.9926476066990144 0.8821322814210726 0.2362997794722944 0.07508483826223517 0.5683789674735159 1.0597854145549912 0.03681969616547041 0.014715647657662551 4.699338562048258e-11 10.327963265270164 -0.11051532527794183 S(ph)RSPIER ddPTM_A549_MK2206_60min_R1 1 SRSPIER 7 1 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;E7ERW0;G5E9M9;E7EWF5;F8W708;E7EQU6;Q14135-5;F8WBN7;E7EUJ2;C9JX59;C9JBN2 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 S(0.5)RS(0.5)PIER 51.268 0.01399 116750000.0 681.22 793.59 748.14 550.94 656.31 410.69 676.31 721.95 866.92 1056.9 1055.1 True False 796.1932817700381 833.9803413030485 854.2375016968697 685.9203247326365 559.7676684086001 454.14894320604174 799.1867727015634 824.2886233791476 670.5640041867682 818.1455559510712 793.089550721398 1.0039134685935742 1.051558856808107 1.0771009414004398 0.8648712167607303 0.7058063845368191 0.5726326148074271 1.0076879363429 1.0393386505084712 0.8455085602588257 1.0315929080226591 1.0 9.631339965019846 -11.044951790584884 1.2999505281827075 1.000830921236186 0.8995119321060502 0.06703031518947322 0.14973996194915667 1.3331228211131603 3.9607751100478326 0.12049516379618563 0.025970584904755206 9.016712232195912e-12 11.044951790584884 -0.10131898913013593 S(ph)RSPIER ddPTM_A549_PD325901_60min_R1 2 SRSPIER 7 1 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;Q14135-6;E7ERW0;G5E9M9;E7EWF5;F8W708;E7EQU6;Q14135-5;F8WBN7;E7EUJ2;C9JX59;C9JBN2 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 S(0.5)RS(0.5)PIER;S(0.85)RS(0.15)PIER 48.091 0.016142 241360000.0 1519.83 1582.53 1779.9 1921.64 1871.7800000000002 1562.46 2019.52 1778.29 1955.54 1640.77 2283.6000000000004 True False 1674.1220227602878 1715.895356989517 1900.6947174081893 2040.3353384389127 1740.3126300904487 1549.735843791963 2096.373938723747 1742.8206109084833 1873.355454373533 1537.171502184439 2002.7316769331012 0.8359192806716712 0.8567774588841411 0.9490511081938011 1.0187761855164723 0.8689694431535082 0.7738110210376075 1.0467572680200703 0.870221723150335 0.9354001217189066 0.7675374189608858 1.0 10.967753428584091 -14.999999999801334 0.10241601939778323 1.3162286208960865 0.8444891711490768 0.0 0.10218378254686947 124.32418627459228 0.9125306099380719 8.262612656546752 0.47323962484275633 1.0000000004574453e-15 14.999999999801334 -0.47173944974700965 S(ph)RSPIIHS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SRSPIIHSPK 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 S(0.5)RS(0.5)PIIHS(1)PK 55.755 0.048115 14593000.0 1920.2 1953.8 1175.1 1091.0 1881.0 1732.3 1727.7 1591.7 2180.0 2352.1 2543.0 True False 2244.282815617316 2053.240074645466 1341.7468498462727 1358.2950489768505 1604.3073917456334 1915.610836192325 2041.6007262889668 1817.3283493768124 1686.2334807446534 1820.758976395604 1911.5029167704638 1.1740933251669283 1.0741495901635718 0.7019329335438266 0.7105901001039155 0.8392911031787251 1.0021490521337009 1.068060481821449 0.950732710597815 0.8821506187359582 0.9525274381855643 1.0 10.900491686250852 -7.26362625965844 24.20484883695697 0.9575068952805026 0.888157991276164 0.059086171064246074 0.13708654584988636 351.5993379090011 3891593.3258029567 0.02202206394441126 0.036260838171872624 5.449714365941664e-08 7.26362625965844 -0.06934890400433857 S(ph)RSPIIHS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SRSPIIHSPK 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 S(0.66)RS(0.347)PIIHS(0.993)PK 54.073 0.057878 24127000.0 3001.0 2655.1 2692.0 2344.3 3281.2 2292.3 2251.8 2619.7 2669.9 2673.9 2969.8 True False 3305.6593107805656 2878.8545950742587 2874.6953083110516 2489.102086708409 3050.739831525487 2273.632268809643 2337.49348123224 2567.4480283851053 2557.6933878273494 2505.0694976693726 2604.5334271132956 1.2691944270588051 1.1053244950152181 1.1037275538049771 0.9556806070510588 1.1713191313911218 0.8729518481663707 0.8974711005429382 0.9857612122224542 0.9820159577149828 0.9618112294476625 1.0 11.346809237711968 -4.408125521455176 0.6322881575079699 0.9818518111070357 1.9211540971612955 0.6006314682012113 0.07275598816024961 4.078434759192191 0.5125340616102014 0.011500182578443036 3.5728325990440157 3.907279497820085e-05 4.408125521455176 0.9393022860542598 S(ph)RSPIIHSPK ddPTM_A549_MK2206_60min_R1 1 SRSPIIHSPK 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(0.5)RS(0.5)PIIHSPK 56.122 0.006669400000000001 3319900.0 295.34 418.96 407.48 218.02 598.87 231.57 249.52 317.52 437.07 592.62 459.39 True False 345.1861716302564 440.2832744771546 465.2667912308394 271.4349097872897 510.77701631829217 256.0745836962746 294.8545541608048 362.5294323642178 338.07434285736946 458.74673040753476 345.3107844809999 0.9996391284131748 1.2750348215706548 1.3473856367681438 0.7860597525074543 1.4791806085233827 0.7415771392172219 0.8538816840139223 1.0498642053971683 0.979043684851874 1.3285039188597263 1.0 8.431751581812232 -7.276399243693581 24.997087360082112 0.9679687866885066 1.1705766954989578 0.1482504276251959 0.21670936236549107 886.363049092789 1481060.4101341264 0.025792536890742266 0.041333725115692964 5.2917675195963e-08 7.276399243693581 0.2026079088104512 S(ph)RSPIIHSPK ddPTM_A549_PD325901_60min_R1 1 SRSPIIHSPK 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(0.5)RS(0.5)PIIHSPK 77.527 0.0005884999999999999 6824100.0 886.97 1056.7 1416.3 845.31 1342.6 1009.7 909.41 1016.5 1065.2 1158.9 1106.1 True False 977.0145414471973 1145.751817488972 1512.4186349037686 897.5228788616996 1248.3004077185542 1001.477337964968 944.0180951982471 996.225110071176 1020.4333483327819 1085.726856220889 970.0567121456048 1.0071726005443566 1.1811183852898235 1.5591033142366997 0.9252272239594401 1.2868324007134804 1.0323905040045194 0.9731576343719487 1.0269761526289438 1.051931640239623 1.119240599675292 1.0 9.921925283403887 -7.334602516498783 8.226205430870818 1.0212895150527588 1.1967345163908163 0.20313865516296958 0.1545531786557618 0.35632364132060523 37.11099026114482 0.02117669031318834 0.03389992734573737 4.6280440453216615e-08 7.334602516498783 0.17544500133805752 S(ph)RSPIQR ddPTM_A549_MK2206_60min_R1 1 SRSPIQR 7 1 Q9Y252 Q9Y252 RNF6 E3 ubiquitin-protein ligase RNF6 1 S(0.6)RS(0.4)PIQR 40.001999999999995 0.033425 40851000.0 294.84 286.61 237.54 232.17 320.38 226.35 228.44 313.61 346.11 348.9 385.26 True False 344.6017838540824 301.1972247897108 271.2267438622107 289.05166042250715 273.2525264048196 250.3022067610302 269.9445910247445 358.06517789034496 267.71663762409713 270.0832476784263 289.5893093649187 1.1899672146385802 1.0400840605968802 0.9365910104106473 0.998143408872411 0.9435863741105419 0.8643351072246185 0.9321635236353999 1.2364585511654305 0.92447003037236 0.9326423280981263 1.0 8.177864533870912 -5.338417729326173 2.7404290613770503 0.9725475623390926 1.2130338900596367 0.322591295415654 0.09086189140527758 0.3200418990803434 3.526407414704439 0.01222251820222668 0.15811639393504903 4.587565422170986e-06 5.338417729326173 0.24048632772054412 S(ph)RSPIQR ddPTM_A549_PD325901_60min_R1 2 SRSPIQR 7 1 Q9Y252 Q9Y252 RNF6 E3 ubiquitin-protein ligase RNF6 1 S(0.885)RS(0.115)PIQR;S(0.5)RS(0.5)PIQR 60.828 0.0079441 114429000.0 2525.17 1984.19 1806.7 1798.6799999999998 2196.74 1950.0700000000002 1551.31 1892.7 1786.16 2220.5299999999997 2299.5299999999997 True False 2781.5233994680984 2151.4046548154115 1929.3135265696797 1909.7803785013332 2042.4485607415886 1934.1892764636484 1610.3459509594043 1854.9486137055744 1711.0939067387162 2080.3253568419796 2016.7023879216893 1.3792433708250798 1.0667933293977698 0.9566674478716376 0.9469817608881078 1.0127664711333197 0.9590851322672976 0.7985045094427368 0.9197929376268503 0.848461288580157 1.0315480208192032 1.0 10.97778248058654 S(ph)RSPITTNHRPSPDPEQRPLR ddPTM_A549_MK2206_60min_R1 1 SRSPITTNHRPSPDPEQRPLR 21 3 P41212 P41212 ETV6 Transcription factor ETV6 1 S(0.5)RS(0.5)PITTNHRPSPDPEQRPLR 72.805 6.8552e-05 10381000.0 438.14 286.82 412.64 250.45 555.45 388.06 295.03 357.68 663.31 760.53 743.49 True False 512.087320505453 301.4179128927286 471.1585568211778 311.8102612431277 473.74404080016586 429.12425162662004 348.6331320698231 408.38223534905984 513.0713440884109 588.7257447889755 558.8609137198868 0.9163054848421951 0.5393433419532464 0.8430694386641838 0.5579389318312816 0.8476957847111432 0.7678551873851505 0.623828082284827 0.7307403780142512 0.9180662513563678 1.053438754323151 1.0 9.126345467379902 -8.836667343344502 3.073344972917893 0.9661705839788359 0.7207578939030738 0.5002383176653469 0.11659700665102472 0.14124639423205967 2.572192592380904 0.01864086213493731 0.01979306156885337 1.4565743460221184e-09 8.836667343344502 -0.24541269007576216 S(ph)RSPITTNHRPSPDPEQRPLR ddPTM_A549_PD325901_60min_R1 2 SRSPITTNHRPSPDPEQRPLR 21 3 P41212 P41212 ETV6 Transcription factor ETV6 1 S(0.842)RS(0.158)PITTNHRPSPDPEQRPLR;S(0.5)RS(0.5)PITTNHRPSPDPEQRPLR 88.571 5.5698e-07 31083000.0 2071.59 2580.9 1636.49 1578.25 2246.3 2450.8 1392.5900000000001 1973.4900000000002 1885.6 2288.7 2858.9 True False 2281.8962917760446 2798.401500669338 1747.5520524138021 1675.7349180341876 2088.5276373143056 2430.84149736015 1445.585774504488 1934.1271937770455 1806.3547893506309 2144.1910914080136 2507.273424060272 0.9101106683772636 1.1161134138045519 0.6969930106720554 0.6683494915048024 0.8329875861453312 0.9695159187798718 0.5765568926916276 0.7714065706662837 0.7204458724032676 0.8551883774748891 1.0 11.29190361869841 -10.930553220006258 1.209004726989133 0.9991293145034335 0.7990315324442073 0.05917157386530347 0.1493420501014974 0.6189360486053775 1.6187490009355958 0.10137707569923149 0.02429348777233093 1.1734018807979058e-11 10.930553220006258 -0.20009778205922613 S(ph)RSPLAR ddPTM_A549_MK2206_60min_R1 2 SRSPLAR 7 1 Q8N3Y1 Q8N3Y1 FBXW8 F-box/WD repeat-containing protein 8 1 S(0.785)RS(0.215)PLAR;S(0.774)RS(0.226)PLAR 68.846 0.0062633 93402000.0 1322.72 1395.1399999999999 1508.4499999999998 1463.0 1722.71 1173.95 1513.67 1269.84 1974.29 2052.36 2344.0 True False 1545.9627986008422 1466.1466668752569 1722.3708923926577 1821.435065676566 1469.3016410601385 1298.176609795058 1788.6842457381595 1449.8437087219022 1527.1164672932857 1588.7304505740744 1761.9201088910604 0.8774307023340916 0.832130049187099 0.9775533429133204 1.0337784650309507 0.8339206946136203 0.7367965228639799 1.0151903237337725 0.8228770994812149 0.8667342290874026 0.9017040231035275 1.0 10.782932793982994 -10.767335498544103 0.9995185925189647 1.0004870064355054 0.8886295177636355 0.027095879876594897 0.08939516789783496 0.7483148314022577 1.3188022050016075 0.05942502466825853 0.014830271178918447 1.7086948145290896e-11 10.767335498544103 -0.11185748867186984 S(ph)RSPLAR ddPTM_A549_PD325901_60min_R1 1 SRSPLAR 7 1 Q8N3Y1 Q8N3Y1 FBXW8 F-box/WD repeat-containing protein 8 1 S(0.646)RS(0.354)PLAR 57.59 0.009705 49018000.0 1485.5 1706.0 1747.5 1961.8 1816.0 1982.8 1757.9 1705.2 1849.8 2042.5 1752.2 True False 1636.3068664326995 1849.7706072075214 1866.0958585711612 2082.975930428935 1688.4504248598932 1966.652734195244 1824.7978464597911 1671.1884482964788 1772.0593388527782 1913.5362014247705 1536.690508110957 1.064825257783495 1.2037365998189393 1.2143602428215294 1.355494759312025 1.0987576326839512 1.2797975414143976 1.1874855976711944 1.0875244165794056 1.1531660601139253 1.2452320043136516 1.0 10.585610917892694 -10.160336161337737 0.4162934512648239 0.9733129751964082 1.2067572189600642 0.0 0.1064084382048638 1.0155797865678122 0.30411687271832955 0.09910197919683351 0.02513316551329136 6.912956732129892e-11 10.160336161337737 0.2334442437636559 S(ph)RSPLELEPEAK ddPTM_A549_MK2206_60min_R1 2 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.598)RS(0.402)PLELEPEAK;S(0.5)RS(0.5)PLELEPEAK 90.561 7.5874e-05 196171000.0 3119.1000000000004 3195.6000000000004 2882.3 3101.5 4098.1 3021.9 2813.8999999999996 3075.3 4180.200000000001 4132.6 4483.9 True False 3645.5278253265137 3358.242390488819 3291.053480820282 3861.367639231624 3495.2749187202435 3341.6754522251267 3325.14920628843 3511.233192711258 3233.3913744077076 3199.04278978465 3370.4238806555563 1.0816229514186355 0.9963857690907507 0.9764509145894621 1.1456623190316875 1.0370431264688296 0.9914703819316525 0.9865670681284395 1.0417779237988054 0.9593426491444169 0.9491514726516914 1.0 11.718714327720136 -7.2480068973254115 4.873539814124141 0.9864546325892765 1.0465576391551683 0.28801637298046223 0.04661208744957139 0.19722270687639992 13.637505918748802 0.006783352474848163 0.011559537248013235 5.649280027360435e-08 7.2480068973254115 0.06010300656589185 S(ph)RSPLELEPEAK ddPTM_A549_PD325901_60min_R1 1 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.605)RS(0.395)PLELEPEAK 82.59 0.00017758 14427000.0 2440.0 2634.8 2226.9 2480.4 3377.6 2432.0 2719.0 2651.2 3202.6 3026.3 3426.3 True False 2687.707003766937 2856.843842831404 2378.030825437549 2633.6086746028814 3140.3690280874316 2412.19459832703 2822.4730328938904 2598.319736173833 3068.0058593414997 2835.218901528413 3004.8868211052213 0.8944453364730645 0.9507325942414809 0.7913878182483061 0.8764418866312639 1.045087291152077 0.802757222463309 0.9392942899113126 0.8646980371853574 1.0210054627658365 0.9435360032913309 1.0 11.553094937593487 -8.767923031375016 24.998884150887775 1.0099192545176523 0.89667448258168 0.24671110785707617 0.06923982284167166 109.21504199978395 421097.0075071088 0.010766286268664134 0.011594222699087714 1.7063847793350376e-09 8.767923031375016 -0.11324477193597227 S(ph)RSPLELEPEAKK ddPTM_A549_MK2206_60min_R1 4 SRSPLELEPEAKK 13 2 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.5)RS(0.5)PLELEPEAKK;S(0.599)RS(0.401)PLELEPEAKK;S(0.5)RS(0.5)PLELEPEAKK;S(0.5)RS(0.5)PLELEPEAKK 112.8 6.1357e-06 86754300.0 9203.1 10315.1 10197.2 8583.2 13853.0 7805.2 7844.500000000001 6081.699999999999 15056.300000000001 16902.800000000003 16152.9 True False 10756.358285807588 10840.09453064564 11643.316294147238 10686.084385314492 11815.24205095814 8631.14108332756 9269.744109147297 6943.799599425113 11646.072089970517 13084.44574049557 12141.689132639243 0.8859029553715377 0.8927995447935937 0.9589535827307355 0.8801151362530112 0.9731135365009841 0.7108682316800023 0.7634641282511843 0.5718973302288572 0.9591805524540725 1.077646248191449 1.0 13.567681520563564 -8.970139873790002 24.997654274231795 0.9819916189197522 0.8319292296978363 0.33264955622605596 0.11339487268657603 183.41545308115417 153549.02391751 0.020103876380722186 0.021154867629403766 1.0711742551863085e-09 8.970139873790002 -0.15006238922191584 S(ph)RSPLELEPEAKK ddPTM_A549_PD325901_60min_R1 2 SRSPLELEPEAKK 13 2 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.5)RS(0.5)PLELEPEAKK;S(0.5)RS(0.5)PLELEPEAKK 99.569 3.221e-05 148907000.0 7395.700000000001 7405.099999999999 6764.4 7513.9 8355.4 9098.0 9243.1 9091.8 9800.5 8828.6 9871.5 True False 8146.50601957342 8029.1537652007055 7223.472861641633 7978.016537694966 7768.545528565173 9023.90890443229 9594.851228518393 8910.456916620878 9388.619067156798 8271.160689301703 8657.368080594282 0.9409910660763088 0.9274358777927283 0.8343728480059935 0.9215290909922035 0.8973333992785373 1.0423385976460466 1.108287315405418 1.0292339234823458 1.08446573828848 0.9553897457405938 1.0 13.079712783726526 -7.263955605490987 21.22435594416209 1.0457809376208942 0.9026846752608253 0.6715869962016536 0.04581180123045327 10.866280775569013 91659.91376969103 0.0063951362850558505 0.010531980707848627 5.44558315910875e-08 7.263955605490987 -0.1430962623600689 S(ph)RSPLGFYVHLK ddPTM_A549_MK2206_60min_R1 3 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.5)RS(0.5)PLGFYVHLK;S(0.642)RS(0.358)PLGFYVHLK;S(0.588)RS(0.412)PLGFYVHLK 101.04 7.7907e-05 49375000.0 7958.6 7577.799999999999 7040.599999999999 6044.799999999999 10651.6 9158.2 8402.400000000001 8482.5 12373.7 11071.400000000001 11610.7 True False 9301.817110911346 7963.477652599247 8039.062948708767 7525.776271361384 9084.763750089196 10127.314645278846 9929.00731757274 9684.920351566761 9571.076706738591 8570.363050578759 8727.442750981836 1.0658124465915166 0.9124640378423975 0.9211246842959094 0.8623117316369374 1.0409422335159015 1.1603988630162627 1.1376765910559228 1.109708837732245 1.096664507557136 0.9820016349708618 1.0 13.091343272888642 -6.915284491133222 7.324437894388848 1.0681965911737736 0.9376515489960726 0.47783680950930496 0.0680793858622933 0.17247652149668236 12.741622731685295 0.010436969758164164 0.01980569041728522 1.2153895805941798e-07 6.915284491133222 -0.13054504217770102 S(ph)RSPLGFYVHLK ddPTM_A549_PD325901_60min_R1 3 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.5)RS(0.5)PLGFY(0.001)VHLK;S(0.632)RS(0.368)PLGFYVHLK;S(0.5)RS(0.5)PLGFYVHLK 92.8 7.421e-05 85481000.0 5662.15 5523.9 5978.41 6337.0599999999995 6955.29 6587.98 5467.210000000001 6343.81 6649.070000000001 6865.150000000001 7470.98 True False 6236.9672997454745 5989.418439128739 6384.14085369981 6728.485803692522 6466.774424847893 6534.3296751178095 5675.26766832211 6217.27773292733 6369.632710663772 6431.683257386175 6552.096822444235 0.9519040192417055 0.9141223949273706 0.9743660734424602 1.0269209973582907 0.9869778484798836 0.9972883264994553 0.8661757941185265 0.9488989405086353 0.972151798618813 0.981622132834548 1.0 12.677740960967634 -9.741919625501007 1.1724899460965121 0.9946691271030889 0.959956294415521 0.07797158066670362 0.040721079767885436 0.7164329612064255 2.008816892552235 0.012200109263068647 0.008156387065408876 1.811675346764069e-10 9.741919625501007 -0.03471283268756786 S(ph)RSPLLK ddPTM_A549_MK2206_60min_R1 1 SRSPLLK 7 1 A0A0U1RQD2;Q6ZUS6-6;Q6ZUS6;Q6ZUS6-5;Q6ZUS6-4 A0A0U1RQD2 CCDC149 Coiled-coil domain-containing protein 149 1 S(0.5)RS(0.5)PLLK 40.352 0.032548 3390100.0 738.13 770.12 990.73 832.69 1074.6 581.38 634.88 686.75 1143.8 1121.2 1126.3 True False 862.7082984541237 809.3158185515234 1131.230411495361 1036.6990873808743 916.5277635140118 642.9012457111894 750.229477980169 784.0989155836688 884.7311262732728 867.9201412927813 846.6086257013654 1.0190166651555441 0.9559503576768461 1.3361905101760607 1.2245316854904829 1.0825873203863503 0.7593842375260275 0.8861585568640385 0.926164572129287 1.0450296623665098 1.0251728070615398 1.0 9.725551377454433 -7.01016741550897 24.863056742027158 0.9835990141705729 1.1378954863486102 0.33612160225087195 0.12169248594862608 528.418714415845 1292182.028758391 0.019005001032248156 0.034427065358701305 9.76860579889107e-08 7.01016741550897 0.15429647217803721 S(ph)RSPLLNDR ddPTM_A549_MK2206_60min_R1 2 SRSPLLNDR 9 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.805)RS(0.195)PLLNDR;S(0.882)RS(0.118)PLLNDR 91.961 0.00028399999999999996 9670600.0 805.12 1024.07 807.79 646.05 1323.54 807.44 666.94 571.91 1035.6100000000001 1198.06 1083.1 True False 941.004572705871 1076.1907888433739 922.3467686471969 804.3322790022868 1128.8490192828365 892.882764864706 788.1143649888077 652.9799939009191 801.0459885293445 927.4174139111932 814.1363779607113 1.1558316249949983 1.3218802377300338 1.1329143293627737 0.9879576699631303 1.3865601020193112 1.0967238278938505 0.9680372801457602 0.8020523484487149 0.9839211343630704 1.1391425798147403 1.0 9.669126673857768 -7.589550948517409 4.515688293896503 0.9739037954383624 1.1934059142643965 0.42590660924933543 0.12042815539590052 0.13803335693599084 5.5768640632457975 0.01652890934274478 0.024936617612690552 2.573054893167605e-08 7.589550948517409 0.2195021188260341 S(ph)RSPLLNDR ddPTM_A549_PD325901_60min_R1 1 SRSPLLNDR 9 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.881)RS(0.119)PLLNDR 66.498 0.0014892999999999998 5258100.0 592.64 826.22 918.58 885.25 852.97 735.84 634.06 697.6 667.37 691.06 849.41 True False 652.8043765214911 895.8484590193426 980.9203626702697 939.929881951379 793.0603297867535 729.847563006975 658.1895002709455 683.6858207433866 639.3227597416902 647.4263536629627 744.9379548536278 0.8763204670511923 1.2025813065134627 1.316781292024528 1.261755929909713 1.0645991718096592 0.979742753408748 0.8835494231197718 0.9177755224966666 0.8582228299366357 0.8691010431736894 1.0 9.540976459708489 -7.145618218444181 2.6387357981701256 0.9276511396764958 1.176638956706391 0.5156465839555933 0.11153368692331012 0.18128067817250995 2.4557534692338234 0.017279140531010165 0.031950904942021165 7.151247048933768e-08 7.145618218444181 0.24898781702989525 S(ph)RSPLLVTVVESDPRPQGQPR ddPTM_A549_MK2206_60min_R1 1 SRSPLLVTVVESDPRPQGQPR 21 2 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 S(0.621)RS(0.379)PLLVTVVESDPRPQGQPR 144.45 2.6544e-22 53878000.0 830.51 914.1 790.66 560.74 1576.5 1148.6 1210.9 793.98 1244.9 1324.6 1608.9 True False 970.6797839799697 960.6237855632212 902.7874770653176 698.1213251725749 1344.5989383769227 1270.1440896210258 1430.9048558565194 906.5290964617711 962.9321376967981 1025.3719400253465 1209.3657266189525 0.8026354332809796 0.7943203320709741 0.7464966611789622 0.5772623696921909 1.1118216010106754 1.05025639611269 1.1831862143612488 0.7495905303982545 0.796229061649437 0.847859268256261 1.0 10.240034883418138 -6.758186402254697 24.99925869975804 0.9346100057389372 0.7359258420930217 0.39176064769400754 0.1364808591798365 86.91216272572068 667911.9540360864 0.021612941104897695 0.04356738197235349 1.7450729945227797e-07 6.758186402254697 -0.19868416364591546 S(ph)RSPLLVTVVESDPRPQGQPR ddPTM_A549_PD325901_60min_R1 3 SRSPLLVTVVESDPRPQGQPR 21 2 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 S(0.612)RS(0.388)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.544)RS(0.453)PLLVT(0.003)VVES(0.001)DPRPQGQPR 144.18 2.7295999999999994e-22 97004600.0 2178.45 2353.8999999999996 1652.67 2100.56 2859.22 2453.31 2157.68 2823.7999999999997 2536.6900000000005 2409.5 2626.71 True False 2399.604640309872 2552.2714140127678 1764.8301245120456 2230.3068204821116 2658.398250973518 2433.331056752337 2239.7916931277996 2767.477093771753 2430.0817408770963 2257.363758792157 2303.6413220865925 1.0416572307950953 1.1079291682877832 0.7661045613270635 0.9681658334127919 1.1539983353682828 1.0562977115501098 0.9722831725813291 1.2013489544739662 1.0548871986182191 0.9799111246830222 1.0 11.169700390709044 -6.583244606507419 24.99975416017389 1.0461453999664125 0.965769866931132 0.1411386440137491 0.10167071931301887 114.38350271211836 47369.80984009767 0.014120569700718746 0.029394313433491272 2.6106905280622417e-07 6.583244606507419 -0.08037553303528056 S(ph)RSPNRFDAHDPR ddPTM_A549_MK2206_60min_R1 2 SRSPNRFDAHDPR 13 2 Q96T58;A0A669KB49;F6WRY4 Q96T58 SPEN Msx2-interacting protein 1 S(0.5)RS(0.5)PNRFDAHDPR;S(0.5)RS(0.5)PNRFDAHDPR 68.48100000000001 0.00078525 120610000.0 1066.8 923.45 1137.4 775.08 1474.0 723.65 788.85 659.91 1199.8 1439.5 1444.4 True False 1246.8497592441163 970.4496606261417 1298.7004229556228 964.9746347946639 1257.1765525959934 800.2261626800064 932.1738339602072 753.4542633896161 928.0472156868973 1114.3159502238316 1085.7156165879899 1.1484128442054766 0.8938341180685166 1.196169975925157 0.8887913372999358 1.1579243527387428 0.7370495095159696 0.8585801104065273 0.6939701813974541 0.8547792824454463 1.0263423802687137 1.0 10.084430549622024 -7.251456434191106 24.983769741666034 0.891820348156781 1.0463440666614006 0.3416809138610887 0.1310006386782136 776.1680488468103 1942472.5697836298 0.019102105916041015 0.03283062307709554 5.604586363819913e-08 7.251456434191106 0.15452371850461954 S(ph)RSPPPVSK ddPTM_A549_PD325901_60min_R1 1 SRSPPPVSK 9 1 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.5)RS(0.5)PPPVSK 51.218 0.0073902 7501400.0 2134.6 2579.2 2271.8 2155.3 2974.3 2263.3 2173.3 2533.1 2231.6 3021.7 2497.1 True False 2351.303020590534 2796.5582357031885 2425.9780094431817 2288.4279859585513 2765.395428777963 2244.8684351947245 2256.0061207753915 2482.575333321494 2137.813612598044 2830.909346313451 2189.9725304211097 1.0736678145174734 1.276983248354005 1.1077664106483978 1.0449573929215037 1.262753477664035 1.0250669376035775 1.0301527025736639 1.1336102616977208 0.9761828438035084 1.292668883736681 1.0 11.096697058381784 -7.910917908211485 0.6959890267645464 0.9879289543140785 1.1567835462389107 0.0 0.12154907652771466 0.4473675829993139 0.44072480816291937 0.016759471624795876 0.028855515829527414 1.2276712677368743e-08 7.910917908211485 0.1688545919248322 S(ph)RSPPRPK ddPTM_A549_MK2206_60min_R1 2 SRSPPRPK 8 2 Q8WUQ7-2;Q8WUQ7 Q8WUQ7-2 CACTIN Cactin 1 S(0.899)RS(0.101)PPRPK;S(0.625)RS(0.375)PPRPK 77.192 0.0014815999999999998 114891000.0 10314.400000000001 11395.8 10917.0 9335.7 14653.3 11245.2 10318.8 10038.2 14196.5 15825.5 15241.1 True False 12055.218557131155 11975.797544602732 12465.194757698728 11622.946919095504 12497.81898110913 12435.159600040372 12193.592391289327 11461.145590698196 10981.015417152055 12250.508558712909 11456.314237039047 1.0522772252663783 1.045344715308538 1.0880632723391874 1.014545051629059 1.090910979091585 1.0854415602390384 1.0643556155143343 1.0004217197223457 0.9585120650452902 1.0693237201111485 1.0 13.483855349715405 -8.345536751008762 3.8073453664555736 0.9804222631385394 1.0635064712824325 0.2874384631564628 0.0350608884364711 0.09423666266119823 2.5888978030254415 0.004078430625791715 0.0049952469460276165 4.512978338531168e-09 8.345536751008762 0.08308420814389306 S(ph)RSPPRPK ddPTM_A549_PD325901_60min_R1 4 SRSPPRPK 8 2 Q8WUQ7-2;Q8WUQ7 Q8WUQ7-2 CACTIN Cactin 1 S(0.937)RS(0.063)PPRPK;S(0.66)RS(0.34)PPRPK;S(0.947)RS(0.053)PPRPK;S(0.637)RS(0.363)PPRPK 68.893 0.0023581 382354000.0 13788.4 14085.3 15283.1 15569.199999999999 17480.800000000003 16492.1 15412.4 16915.7 16313.0 17696.4 18755.4 True False 15188.188217516416 15272.31766336465 16320.303070746148 16530.87412378131 16253.008913486148 16357.793805538318 15998.92731598889 16578.303093390066 15627.421339985598 16579.04628391349 16448.604700276348 0.923372437618447 0.928487123476684 0.992199847229106 1.0050016049995765 0.9881086699842137 0.9944791125817193 0.9726616699421379 1.0078850696139314 0.9500758042852745 1.0079302522015712 1.0 14.005677587986055 -5.753623098437932 24.443963175090307 0.9825084757358433 0.9259297297816994 0.6398149936433957 0.017920611978929964 77.35292975196157 241898.54046124985 0.0028701224081094196 0.010700606124915774 1.7635058373726162e-06 5.753623098437932 -0.056578745954143916 S(ph)RSPPTSELMMK ddPTM_A549_PD325901_60min_R1 2 SRSPPTSELMMK 12 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 S(0.566)RS(0.417)PPT(0.013)S(0.005)ELMMK;S(0.499)RS(0.499)PPT(0.002)SELMMK 47.711999999999996 0.0097178 11753900.0 2812.5 2747.6 2727.1 3013.8 3336.3999999999996 3767.0 3171.2 3277.7 4128.3 3432.6 3175.1 True False 3098.022929546929 2979.1498947030377 2912.1774053845006 3199.955581163587 3102.06277395515 3736.3228009448676 3291.8817513472254 3212.3237021940936 3954.8019075499665 3215.8650501888183 2784.58282861722 1.112562678225434 1.0698729677157552 1.0458217925701432 1.1491687545716263 1.1140134680409508 1.3417890689214178 1.1821813010970559 1.1536103969258773 1.4202493339060986 1.154882166599356 1.0 11.443245491521488 -6.816582284227121 2.276826052898741 1.2066918142587937 1.0819374386566087 0.20400468536812988 0.10506843843856865 0.5269800529999147 5.5676820861051155 0.022862496516132803 0.04986374366067997 1.525519332715448e-07 6.816582284227121 -0.12475437560218494 S(ph)RSPRPSK ddPTM_A549_PD325901_60min_R1 2 SRSPRPSK 8 2 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 S(0.588)RS(0.412)PRPSK;S(0.5)RS(0.5)PRPSK 50.284 0.0079487 20006200.0 3243.1400000000003 3247.9 2467.86 2480.33 2497.82 2468.23 1800.13 2143.26 2593.76 3450.76 3833.31 True False 3572.381185326519 3521.611931506043 2635.343820047739 2633.5343508618607 2322.3817402112013 2448.129553219048 1868.6349322189333 2100.510997945056 2484.753287243369 3232.8784246896153 3361.8371713541865 1.0626276655414346 1.0475260258031764 0.7838998992881598 0.7833616610887323 0.6908073240429189 0.7282118164672781 0.5558374296475 0.6248104506200537 0.7391057807366922 0.961640394792641 1.0 11.715034134825503 -5.757456143957582 23.251064971842023 0.8031286315173964 1.0550771720185697 0.4099532036490626 0.12793346053870094 40.78220405657297 238027.73246381397 0.022096926930064445 0.07941956765298593 1.7480097714997746e-06 5.757456143957582 0.2519485405011732 S(ph)RSPS(ph)SPELNNK ddPTM_A549_PD325901_60min_R1 1 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.703)RS(0.506)PS(0.782)S(0.009)PELNNK 86.411 9.136100000000001e-05 41654000.0 4771.1 5253.1 6031.6 4794.3 6758.0 5894.6 6227.9 6352.0 5472.2 5752.4 6093.1 True False 5255.458559701816 5695.7971727560525 6440.9406469572605 5090.433022354698 6283.341393834343 5846.596331948401 6464.906142537644 6225.3043769523965 5242.222464088103 5389.192482289275 5343.687327343262 0.9834891597811148 1.0658926736995014 1.2053363627769598 0.9526068256852005 1.1758437589869712 1.0941127303672484 1.2098211864787047 1.1649829033031112 0.9810122005574745 1.008515684425091 1.0 12.383619879209029 -8.775906620573561 24.97942185708501 0.9910335254852856 1.1086623445701198 0.2734361589931803 0.07966599299783603 196.2248173511588 338804.45477494557 0.01322633797632992 0.014111301824033912 1.6753030510400842e-09 8.775906620573561 0.11762881908483425 S(ph)RSPSLNR ddPTM_A549_PD325901_60min_R1 1 SRSPSLNR 8 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.707)RS(0.282)PS(0.011)LNR 49.358000000000004 0.027868 8994700.0 1799.9 1490.2 2118.6 1567.4 1791.0 1278.1 1639.2 1603.4 1977.2 1991.4 1853.8 True False 1982.6245229836527 1615.7843838573556 2262.380936176743 1664.2147381763255 1665.206338614577 1267.6915773527044 1701.5806530046577 1571.4189291570335 1894.1051598982137 1865.6626641455491 1625.7943522064206 1.219480508277671 0.9938430292026293 1.3915541858700573 1.0236317624783007 1.0242416799853369 0.7797367333896056 1.0466149366894928 0.9665545504106393 1.1650336694352883 1.1475391470105645 1.0 10.666929066173893 S(ph)RSPSSPELNNK ddPTM_A549_MK2206_60min_R1 2 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.529)RS(0.392)PS(0.066)S(0.014)PELNNK;S(0.606)RS(0.36)PS(0.031)S(0.002)PELNNK 60.301 0.0024515 16221800.0 4180.9 4442.6 4186.5 3614.1 5473.299999999999 4251.8 3948.2 4130.8 5764.7 5938.9 6220.799999999999 True False 4886.533706808892 4668.709364121173 4780.208651928706 4499.554662243112 4668.184820436666 4701.722653883579 4665.536833671411 4716.353550044439 4459.004654334267 4597.298365254819 4676.0036746542255 1.0450234958744413 0.9984400545763917 1.022285050338885 0.9622649970598748 0.9983278768021632 1.0055002050936703 0.9977615840980731 1.0086291368009237 0.9535930603527584 0.9831682533044146 1.0 12.191060348279164 -2.000000000001669 0.4791610811454977 0.9824166508666513 2.571013044758731 0.35751191934838167 0.019398571613613285 70.65729960741487 0.7064329021744963 0.004364401831714058 112.62616374094353 0.009999999999961573 2.000000000001669 1.5885963938920797 S(ph)RSPSSPELNNK ddPTM_A549_PD325901_60min_R1 2 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.482)RS(0.482)PS(0.026)S(0.01)PELNNK;S(0.499)RS(0.499)PS(0.001)SPELNNK 78.673 0.00026989 43718000.0 8685.8 8794.9 8532.2 8568.1 10216.7 8003.700000000001 8942.3 8581.2 8378.6 9889.8 10116.400000000001 True False 9567.576021851992 9536.077088704238 9111.246400286609 9097.332077433057 9499.114237701593 7938.52052081828 9282.60411991432 8410.041234178829 8026.476579366364 9265.356340196167 8872.146933143287 1.078383405273736 1.0748330883791763 1.0269494485320265 1.0253811333363467 1.07066692078962 0.8947688288572746 1.046263569558086 0.9479150083461546 0.9046825576549246 1.0443195328048485 1.0 13.11506754307896 -7.243766676903502 24.92621019883382 0.9571938916346955 1.0531003196467865 0.385659203978424 0.049515316961812585 533.285675726243 752165.3013434839 0.007027763989343261 0.012156182820667293 5.7047067321622506e-08 7.243766676903502 0.09590642801209104 S(ph)RSPSSPR ddPTM_A549_PD325901_60min_R1 2 SRSPSSPR 8 1 O95382-2;O95382-3;O95382 O95382-2 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 1 S(0.499)RS(0.499)PS(0.001)SPR;S(0.678)RS(0.309)PS(0.013)SPR 81.97200000000001 0.0030095 25703600.0 1428.3400000000001 1772.16 1542.3799999999999 1422.21 1864.96 1420.8899999999999 1195.61 1235.94 1369.28 1815.37 1856.82 True False 1573.3440253116664 1921.506142596062 1647.0551818843983 1510.056681626739 1733.971643362724 1409.3187429345778 1241.1095928128962 1211.288207123827 1311.7339233994655 1700.7472283870175 1628.4429113517783 0.966164680593946 1.1799653087015562 1.0114294891167968 0.9273009640683281 1.0648034581226713 0.8654394533024775 0.7621449816638921 0.7438321593468271 0.8055142211344632 1.0444008915088212 1.0 10.669277428434377 -7.266424036839064 24.150454666533555 0.8774892236332762 1.0315381948897953 0.36969503175872886 0.10359148212058629 251.01572221232345 1216161.326653434 0.016822886626106464 0.027427311586146974 5.4147194934800176e-08 7.266424036839064 0.15404897125651906 S(ph)RSPSWYK ddPTM_A549_MK2206_60min_R1 1 SRSPSWYK 8 1 Q86Y07-4;Q86Y07-3;Q86Y07 Q86Y07-4 VRK2 Serine/threonine-protein kinase VRK2 1 S(0.5)RS(0.5)PSWYK 51.927 0.007860800000000001 6970400.0 1335.2 1034.3 891.77 682.29 1126.4 1165.5 1109.9 943.84 1307.3 1489.2 1592.1 True False 1560.5491174941367 1086.941452147511 1018.236395444993 849.451080629162 960.7080521330571 1288.8324364037148 1311.5544632216959 1077.6322103887737 1011.1986373291222 1152.7886857056822 1196.737630275365 1.304002713723525 0.9082537597630398 0.850843467845747 0.7098056074610993 0.8027724940110738 1.0769548845114523 1.0959415247266118 0.9004749103952003 0.8449626816668655 0.9632760402465406 1.0 10.224891178806153 -11.245800951731661 1.7431394156270086 1.0000453074934226 0.9210188731317798 0.0 0.15741929694885667 1.3365963179321299 7.329634978886725 0.11800246312310761 0.02410633281694282 5.6780478523540155e-12 11.245800951731661 -0.0790264343616428 S(ph)RSPSWYK ddPTM_A549_PD325901_60min_R1 2 SRSPSWYK 8 1 Q86Y07-4;Q86Y07-3;Q86Y07 Q86Y07-4 VRK2 Serine/threonine-protein kinase VRK2 1 S(0.655)RS(0.345)PSWYK;S(0.665)RS(0.335)PSWYK 82.749 0.00096988 18853700.0 4056.2 3444.8999999999996 3707.6 2800.7 3504.7 3878.8999999999996 3054.3 3327.8999999999996 4527.2 4068.3 4907.2 True False 4467.982437983381 3735.2138128776005 3959.220031609977 2973.692878148802 3258.541962558628 3847.311524445194 3170.53305787709 3261.522423812953 4336.937527762083 3811.4268436995803 4303.645509303781 1.0381855169819005 0.8679185599284783 0.919968901493115 0.6909706832777378 0.7571585428014901 0.893965712586674 0.7367086929030082 0.7578510861924088 1.0077357715421333 0.8856275070657877 1.0 12.071343532855932 -8.775353701136453 24.974379120189624 1.0036530266017398 0.8284958086381279 0.23166709453937218 0.09979767331953775 159.19309986774226 285729.7161974138 0.01617478766936317 0.01726183742232058 1.6774373114795568e-09 8.775353701136453 -0.17515721796361194 S(ph)RSPTPQNQDGDTMVEK ddPTM_A549_MK2206_60min_R1 2 SRSPTPQNQDGDTMVEK 17 1 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;E9PRD6;A0A0J9YXZ1 J3KNL5 GRAMD1B GRAM domain-containing protein 1B 1 S(0.632)RS(0.363)PT(0.005)PQNQDGDTMVEK;S(0.624)RS(0.376)PTPQNQDGDTMVEK 156.05 1.1673e-22 51672000.0 5311.200000000001 5334.1 4958.3 5401.7 6409.6 5509.7 5794.1 4858.7 8061.2 7917.4 7929.0 True False 6207.600713627063 5605.582906216799 5661.461497398327 6725.1167424915275 5466.7563307457785 6092.732796957135 6846.812969954798 5547.435604144699 6235.3510710911905 6128.85384112689 5960.010470732602 1.0415419140805682 0.9405323923076536 0.9499079783835385 1.1283733099993831 0.9172393836539363 1.0222688075593631 1.1487921042382314 0.9307761507108243 1.0461980061462448 1.028329374792782 1.0 12.541099149923472 S(ph)RSPTPQNQDGDTMVEK ddPTM_A549_PD325901_60min_R1 2 SRSPTPQNQDGDTMVEK 17 1 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;E9PRD6;A0A0J9YXZ1 J3KNL5 GRAMD1B GRAM domain-containing protein 1B 1 S(0.5)RS(0.5)PTPQNQDGDTMVEK;S(0.498)RS(0.498)PT(0.003)PQNQDGDTMVEK 197.69 1.1668e-48 61978000.0 12924.8 15166.599999999999 15016.5 15250.0 17807.0 16599.4 16223.9 17051.5 17983.9 16574.6 17694.6 True False 14236.916181265125 16444.742609187335 16035.60999155011 16191.957864737115 16556.297750815058 16464.219989913523 16841.309392558735 16711.394455857022 17228.09922369688 15528.076927361059 15518.276375311098 0.9174289616284602 1.0597016196560467 1.0333370539180542 1.0434121337404336 1.0668902493034218 1.060956744919647 1.0852564411955263 1.076884703667485 1.110181234502695 1.0006315490079525 1.0 13.921680704929926 -5.260684969898131 24.750536488066775 1.0567080698569644 0.9174289115348917 0.5979437778588286 0.03204477365493898 34.65096825250878 1136567.7757161371 0.005427623888776271 0.045210443731814175 5.486748203299135e-06 5.260684969898131 -0.13927915832207272 S(ph)RSPVDLR ddPTM_A549_MK2206_60min_R1 1 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.845)RS(0.155)PVDLR 49.35 0.009359399999999999 3586400.0 381.29 334.87 320.89 122.62 346.6 355.41 250.45 322.0 362.06 337.23 287.43 True False 445.64243035450795 351.91345265458466 366.3970271867675 152.66190550462102 295.6155991382435 393.01925029793574 295.95352312269 367.64448608364256 280.0539880910135 261.0495087835934 216.05319833556206 2.0626513922851557 1.628827785775297 1.6958648611056413 0.7065940549860079 1.368253751463144 1.8190855461788613 1.3698178291396137 1.7016387117428236 1.2962269952423888 1.2082649587910546 1.0 7.755242777743339 -2.0000000033483527 0.046369420345874275 3.4056305936940206e-11 4.033779476222461 0.23542552737863598 0.32470518061330084 417.12438391840357 1.424822752742499 30.448497831382134 122.88931561413357 0.00999999992290133 2.0000000033483527 4.033779476188404 S(ph)RSPVDLR ddPTM_A549_PD325901_60min_R1 2 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.839)RS(0.161)PVDLR;S(0.878)RS(0.122)PVDLR 78.655 0.0011824000000000001 10145200.0 1644.02 1865.31 1606.4 1483.27 1991.51 1133.1 1637.58 1446.48 1505.6399999999999 1857.4099999999999 1822.29 True False 1810.9197001364423 2022.506220006013 1715.4199640679333 1574.8882191494179 1851.633207936524 1123.872409278108 1699.89900301816 1417.6288216583923 1442.36318680414 1740.1328156124273 1598.1598824480725 1.133127993028121 1.2655218305867646 1.073371934127292 0.9854384636016473 1.1586032338017267 0.7032290208389866 1.0636601642222698 0.8870381726056461 0.9025149502531111 1.0888352502922798 1.0 10.642196029646811 -6.262541606136257 1.1274861364170685 0.9455179352964843 1.206636952397341 0.3412702435791982 0.11864106165098871 0.39562245161940185 0.8678019360909547 0.01570916129613953 0.07904009450927482 5.463342076456659e-07 6.262541606136257 0.2611190171008567 S(ph)RSPVEQR ddPTM_A549_MK2206_60min_R1 1 SRSPVEQR 8 1 P35612-2;P35612-8;P35612-9 P35612-2 ADD2 Beta-adducin 1 S(0.909)RS(0.091)PVEQR 60.434 0.0031525 3790600.0 265.27 293.58 373.99 225.2 298.82 289.62 246.88 177.21 283.07 446.96 313.88 True False 310.0410907711724 308.52196801843394 427.0274056454836 280.3740101096123 254.86397384446053 320.26739616580346 291.7349003335186 202.3300601828642 218.95509696990325 345.99142557279856 235.93493335269875 1.3140957397253779 1.3076570037096835 1.80993717029229 1.1883531028043297 1.0802299185744775 1.35743949238342 1.2365057441383833 0.8575672000229034 0.9280316986488288 1.4664696772799497 1.0 7.8822452346490515 -7.54106796035432 0.7905369557303699 0.9563485740585369 1.4225975545287968 0.165808099179226 0.23505543829969025 0.35780548361211556 0.4474098287738326 0.03440743151556816 0.07294375078653732 2.876948181715138e-08 7.54106796035432 0.46624898047025987 S(ph)RSPYSSR ddPTM_A549_MK2206_60min_R1 1 SRSPYSSR 8 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YCQ1 Q14004 CDK13 Cyclin-dependent kinase 13 1 S(0.862)RS(0.138)PYSSR 46.843999999999994 0.010817 8136500.0 1077.6 956.76 1227.2 759.79 1360.1 955.61 785.02 877.26 1562.9 1453.0 1319.0 True False 1259.4725352094672 1005.4549973476287 1401.2354132681025 945.9385841082695 1160.0310917135757 1056.73201591742 927.6479725365308 1001.6142914960745 1208.9056454384486 1124.7662908476739 991.4558974519226 1.2703263336739001 1.0141197404056845 1.4133108864139374 0.9540904305873471 1.170027930334468 1.0658386506482633 0.9356421954023568 1.0102459363752432 1.219323671930723 1.1344592268182214 1.0 9.95340478881229 -6.28462452686972 24.993877673997776 1.0810199393855284 1.21073915676322 0.26841492321778027 0.12143113475227892 1002.3489326838476 1080542.9542892065 0.017794486367444646 0.0413740837638884 5.192487660325113e-07 6.28462452686972 0.12971921737769154 S(ph)RSPYSSR ddPTM_A549_PD325901_60min_R1 1 SRSPYSSR 8 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YCQ1 Q14004 CDK13 Cyclin-dependent kinase 13 1 S(0.871)RS(0.128)PYSSR 51.113 0.0083341 12814000.0 2122.6 1777.3 1773.7 2274.3 1976.4 2646.5 1815.5 2121.6 2529.2 1945.3 2437.0 True False 2338.084789424469 1927.079308434893 1894.0739481245603 2414.778345689941 1837.5844822098547 2624.94778144428 1884.5898459797197 2079.2830236369987 2422.906519529921 1822.4734260130242 2137.2644494158208 1.0939613907223968 0.901656932983479 0.8862141269613445 1.129845371427936 0.8597833940072892 1.228181090160255 0.8817766311018906 0.9728711972003885 1.1336484449512902 0.8527131148937426 1.0 11.061549712199616 -7.145649274883848 0.7802708229472062 1.0535780542708988 0.9703830778509609 0.0 0.1318124393801042 1.4560327758221692 1.7028971403247357 0.020865304273577162 0.059838390469978874 7.150735680862003e-08 7.145649274883848 -0.0831949764199379 S(ph)RSQPCDLDAR ddPTM_A549_MK2206_60min_R1 1 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.601)RS(0.399)QPCDLDAR 80.706 0.00023719 14033000.0 916.74 1238.3 956.32 716.04 1306.7 1103.5 932.23 1007.4 1223.5 1543.6 1771.7 True False 1071.463299858878 1301.3241807930601 1091.940556076069 891.4698321442565 1114.4861609750237 1220.2716375559833 1101.6041240194263 1150.20203503311 946.3792035280195 1194.8996879232404 1331.7379935675308 0.8045601349771399 0.9771623150188901 0.8199364750050574 0.6694033184081049 0.8368659348596631 0.9163000856400098 0.827192833230199 0.8636849294596509 0.7106346804695483 0.8972483278953989 1.0 10.379094558841672 -11.051825680439737 1.3645831482373694 0.9997159442899772 0.8150008986952102 0.2022599659193095 0.08563464750244291 0.3690603909185235 1.2286704332376068 0.06205703166812235 0.013913401108972248 8.875121751792682e-12 11.051825680439737 -0.18471504559476704 S(ph)RSQPCDLDAR ddPTM_A549_PD325901_60min_R1 1 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.627)RS(0.373)QPCDLDAR 93.90899999999999 1.5428999999999999e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)RSQTNDNYEGDLTSGVYLLSR ddPTM_A549_MK2206_60min_R1 2 SRSQTNDNYEGDLTSGVYLLSR 22 1 A0A1B0GV68 A0A1B0GV68 1 S(0.333)RS(0.333)QT(0.333)NDNYEGDLTSGVYLLSR;S(0.332)RS(0.332)QT(0.332)NDNY(0.003)EGDLTSGVYLLSR 55.413000000000004 0.0016642 13724200.0 1410.6399999999999 1768.88 1407.29 1436.4099999999999 2607.2 1780.7800000000002 1608.08 1696.94 2829.3999999999996 2327.7 2275.3 True False 1648.7215451632171 1858.908436502649 1606.8648832611368 1788.3305144828962 2223.6843337369546 1969.2209576139053 1900.2473206753252 1937.4864416607948 2188.5454176233598 1801.87095334214 1710.280214914603 0.9640066760905261 1.08690284801983 0.9395331064748182 1.0456359717475832 1.3001871356197539 1.151402524826747 1.1110736732519633 1.1328473689661063 1.2796414286606463 1.0535530596850822 1.0 10.740017002491507 -6.5379909737847255 24.8999156419379 1.145578238953178 1.0036166191519733 0.3692175742968935 0.08818230576768978 235.03303008243307 387255.1294697085 0.01587564213732102 0.03305736951740847 2.8974038056405454e-07 6.5379909737847255 -0.14196161980120459 S(ph)RSQTNDNYEGDLTSGVYLLSR ddPTM_A549_PD325901_60min_R1 3 SRSQTNDNYEGDLTSGVYLLSR 22 1 A0A1B0GV68 A0A1B0GV68 1 S(0.427)RS(0.427)QT(0.114)NDNY(0.031)EGDLT(0.001)SGVYLLSR;S(0.333)RS(0.333)QT(0.333)NDNY(0.002)EGDLTSGVYLLSR;S(0.581)RS(0.39)QT(0.03)NDNYEGDLTSGVYLLSR 134.15 1.7338e-22 11185400.0 3203.62 3066.35 3049.01 3101.02 3244.83 3183.06 2540.12 3183.59 3138.32 3487.19 3908.4 True False 3528.8491440196035 3324.762075856262 3255.934153786584 3292.5629624725957 3016.924334855797 3157.138214700179 2636.7856566069977 3120.0907999719607 3006.4273242017794 3267.0082282724297 3427.691577388916 1.029511863698001 0.9699711892949652 0.9498912257055606 0.960577370552325 0.8801621344105803 0.9210683468508465 0.7692598931598157 0.9102600772350488 0.8770997204164911 0.9531219931873542 1.0 11.743021586705972 -5.349094312969585 1.0713867888180477 0.9212054647473836 1.0690089710251414 0.2884482760073144 0.0567841436841135 2.0400260227862286 2.03030820204629 0.010182057493662884 0.32867515320405555 4.476160876828425e-06 5.349094312969585 0.14780350627775773 S(ph)RSRDDLYDQDDSRDFPR ddPTM_A549_MK2206_60min_R1 1 SRSRDDLYDQDDSRDFPR 18 3 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(0.573)RS(0.426)RDDLY(0.001)DQDDSRDFPR 67.76 0.00051624 17248000.0 506.25 630.44 361.96 210.86 543.16 452.58 335.84 146.79 622.55 606.64 406.56 True False 591.6926233758287 662.5267031730414 413.2913707517292 262.5207094658651 463.261883519701 500.4717152017101 396.8577808166268 167.59793202552135 481.5434190080661 469.5996026702218 305.59993151482496 1.9361673952048157 2.1679543574796303 1.3523935319719795 0.8590339276732788 1.5159096444274813 1.6376695921393938 1.298618683745925 0.5484226753414406 1.5757314362641013 1.5366482588607553 1.0 8.255500409839376 -5.813153412750962 5.876707558504923 1.245308671131358 2.052215449094532 0.47320227878997667 0.32363122075755935 0.11341081489152867 8.484541198471929 0.04603870498038261 0.15089379579206863 1.5376113894183346e-06 5.813153412750962 0.8069067779631742 S(ph)RSRDDLYDQDDSRDFPR ddPTM_A549_PD325901_60min_R1 1 SRSRDDLYDQDDSRDFPR 18 3 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(0.578)RS(0.422)RDDLYDQDDSRDFPR 116.24 1.4912e-10 15055000.0 453.99 407.77 678.02 614.58 458.58 473.12 736.69 638.82 624.74 871.76 981.55 True False 500.0787305902259 442.1342089689394 724.0345144654751 652.5412107875494 426.3709228151157 469.267067582436 764.7251410822363 626.0782339554047 598.4843503918717 816.7169248245075 860.8255725581039 0.5809292225185047 0.5136164898715254 0.8410931756056821 0.7580411544331813 0.4953046661335524 0.5451360676796826 0.8883624806936355 0.727299761895893 0.6952446226862937 0.9487600634324567 1.0 9.749577126468933 -14.999998554716129 0.1787795459725927 2.409253033147262 0.5970412812256689 0.5085641062108726 0.11926026284514676 30.446966615386458 0.336839665510226 14.9458409867161 0.14155248690341435 1.0000033278946344e-15 14.999998554716129 -1.812211751921593 S(ph)RSRDKEER ddPTM_A549_PD325901_60min_R1 1 SRSRDKEER 9 3 P08621-4;P08621;P08621-2 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 S(0.597)RS(0.403)RDKEER 66.262 0.0016047000000000001 19158000.0 1389.8 1703.3 907.05 894.51 1138.7 760.4 680.79 742.2 1113.4 1439.6 1486.6 True False 1530.8914728833154 1846.8430687318705 968.6078675347471 949.7618511203935 1058.7216403017405 754.2075545098169 706.6978359925823 727.3962387553634 1066.6076699527976 1348.7034103163273 1303.757624333835 1.1742147806541388 1.4165539930595068 0.7429355345320912 0.7284803811641613 0.812054035613178 0.5784875504718026 0.5420469440043927 0.5579229031370244 0.8181027286400636 1.0344740350074328 1.0 10.348459974267302 -3.287355993908457 10.294156577118311 0.8641532182071437 1.0851755572209139 0.0 0.2638557572128656 0.0 0.0 0.036110365866490315 0.0 0.0005159932329853211 3.287355993908457 0.2210223390137701 S(ph)RSRDS(ph)GDENEPIQER ddPTM_A549_PD325901_60min_R1 2 SRSRDSGDENEPIQER 16 2 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 2 S(0.871)RS(0.141)RDS(0.989)GDENEPIQER;S(0.819)RS(0.184)RDS(0.997)GDENEPIQER 133.98 2.4758000000000004e-10 118517000.0 3590.8 3278.0 3906.3 3517.8 3483.0 3686.1000000000004 3293.8 3458.4 3293.1 3754.7 3901.2999999999997 True False 3955.335372592753 3554.248564142 4171.405008490144 3735.086516496539 3238.3660956976923 3656.081623722558 3419.1473614365204 3389.419498937684 3154.70245906373 3517.627601218888 3421.4648323783076 1.1560356649474444 1.0388090301285933 1.2191868725391932 1.0916629863181229 0.9464852787765348 1.0685720306472257 0.999322667028503 0.9906340310333254 0.9220327005000525 1.0281057306012806 1.0 11.740398403328292 -6.649083558812972 4.804276736105071 0.9745424682753306 1.1319891349245588 0.5622683415398191 0.05553893798685429 0.10362462326735408 3.9328546870385743 0.007938037160276027 0.016824990444795133 2.2434502395645139e-07 6.649083558812972 0.15744666664922813 S(ph)RSRENSVCSDTSESSAAEFDDR ddPTM_A549_MK2206_60min_R1 1 SRSRENSVCSDTSESSAAEFDDR 23 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.252)RS(0.225)RENS(0.252)VCS(0.252)DT(0.008)S(0.009)ES(0.002)S(0.002)AAEFDDR 43.801 0.015816999999999998 2745700.0 451.04 326.96 451.81 572.63 487.87 209.58 479.96 471.38 758.5 651.35 665.32 True False 527.1645251307335 343.6008674409262 515.883451816054 712.9243757063375 416.1049692774811 231.75761649205535 567.1625192971302 538.1995585407062 586.7009610756052 504.20958261777844 500.1026821021329 1.0541125732716505 0.6870606372208072 1.0315550591482296 1.4255559932404869 0.8320390675139441 0.46342006309161304 1.13409213666505 1.0761781086204874 1.173160996876611 1.0082121145569196 1.0 8.966080532162882 S(ph)RSSDIVSSVR ddPTM_A549_MK2206_60min_R1 2 SRSSDIVSSVR 11 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.499)RS(0.499)S(0.002)DIVSSVR;S(0.676)RS(0.318)S(0.007)DIVSSVR 167.69 1.6113e-15 83266000.0 6462.1 6430.599999999999 5550.4 5165.6 7115.8 4815.0 4268.9 4644.9 7596.2 7686.299999999999 6877.299999999999 True False 7552.744496823585 6757.890072686632 6337.530180739304 6431.172231892594 6069.07524624326 5324.5201040616785 5044.50387246337 5303.328799409661 5875.67282863878 5949.959491632813 5169.476606175976 1.4610269224935302 1.3072677540726227 1.2259519993122427 1.2440664155843688 1.1740212227660598 1.0299921074602547 0.9758248768234484 1.0258927940739246 1.1366088438468047 1.1509790922594358 1.0 12.335802504100027 -5.394952393314527 0.5270644155506803 1.0506035154609903 1.6753234943219668 0.8023001012046496 0.06272071061131056 1.188563466967959 0.23818695876455806 0.013157507968634338 0.44223942725309867 4.027611819599073e-06 5.394952393314527 0.6247199788609765 S(ph)RSSDIVSSVR ddPTM_A549_PD325901_60min_R1 2 SRSSDIVSSVR 11 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.675)RS(0.316)S(0.009)DIVSSVR;S(0.684)RS(0.302)S(0.014)DIVSSVR 151.38 1.9287e-12 116300000.0 8166.1 8681.3 7022.299999999999 7015.7 9202.7 8760.5 8444.3 8642.6 8911.6 8616.3 8937.1 True False 8995.116460434914 9412.903618025004 7498.87550652032 7449.043855189253 8556.334099591493 8689.157392534516 8765.652457398262 8470.216563011465 8537.076442923784 8072.265347533045 7837.893356944656 1.1476446604705226 1.2009481616236628 0.9567463047804863 0.950388518438967 1.0916624799456187 1.108608780041082 1.1183684260811713 1.080675147934559 1.0892054859817182 1.0299024214689942 1.0 12.936250228302164 -10.680206396398225 0.876342548607953 0.9984747416244343 1.0807996462539378 0.1160152017736259 0.07035726629235373 1.0289356197648203 1.3653892734102224 0.05528753619688962 0.013578386926312204 2.0883034386554606e-11 10.680206396398225 0.08232490462950348 S(ph)RSTAVMPK ddPTM_A549_PD325901_60min_R1 1 SRSTAVMPK 9 1 H3BPM0;H3BS25;Q9BY12-2;Q9BY12;H3BT27;Q9BY12-3 H3BPM0 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum 1 S(0.486)RS(0.486)T(0.028)AVMPK 41.242 0.020576 4737300.0 1816.5 1510.9 1895.7 1810.4 2446.5 1906.8 1643.8 2373.7 2298.0 2152.9 2180.4 True False 2000.9097427633783 1638.2288455040118 2024.3536017701576 1922.2242962832838 2274.666279966814 1891.2716529975241 1706.355708521874 2326.3546913683726 2201.423051510263 2016.9655265837885 1912.2246226944014 1.0463779824903707 0.8567136026078785 1.058637974715419 1.005229340460428 1.189539269064383 0.9890426211187713 0.8923406216355222 1.2165697814781014 1.1512366410219996 1.0547743725534728 1.0 10.901036286544185 -5.894406241738041 9.969190775955374 1.0681348971022615 0.951754323592936 0.1545982404430788 0.09890572719548489 0.398795429287652 34.86055705723373 0.013996571852910703 0.04363641857266143 1.2752453783318793e-06 5.894406241738041 -0.11638057350932551 S(ph)RSTCGDSEVEEESPGK ddPTM_A549_MK2206_60min_R1 2 SRSTCGDSEVEEESPGK 17 1 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 S(0.449)RS(0.449)T(0.098)CGDS(0.005)EVEEESPGK;S(0.471)RS(0.282)T(0.044)CGDS(0.203)EVEEESPGK 186.01 7.1430999999999995e-40 13083200.0 2687.0 2518.4 2038.7800000000002 1893.92 2469.0 2072.5 1851.5 2227.0 2724.1000000000004 3194.7 3685.2 True False 3140.4999091572367 2646.5758030438847 2327.9096609051035 2357.930485021299 2105.813370664523 2291.81057438584 2187.8935837958097 2542.6840699014638 2107.0956994938124 2473.0150511844877 2770.0631336541537 1.1337286399730602 0.955420752289003 0.8403814456872037 0.851219041318677 0.7602041069318952 0.8273495815102876 0.7898352774760156 0.9179155662590474 0.7606670309763728 0.8927648691971102 1.0 11.435703142370414 -5.350463933638 2.4714219116370235 0.8634032990542063 1.16690266876994 0.5961111877134706 0.06848421113322518 0.3169037091811567 2.708499427323597 0.013041511076975924 0.1847994350676259 4.462066786630624e-06 5.350463933638 0.30349936971573366 S(ph)RSTCGDSEVEEESPGK ddPTM_A549_PD325901_60min_R1 2 SRSTCGDSEVEEESPGK 17 1 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 S(0.35)RS(0.237)T(0.35)CGDS(0.063)EVEEESPGK;S(0.455)RS(0.455)T(0.085)CGDS(0.004)EVEEESPGK 179.58 2.8846999999999996e-31 14218100.0 2409.9 2583.2 3024.1 2318.6 2688.1800000000003 2145.14 2154.05 2987.8 2187.1 2928.2 3086.0 True False 2654.551273925386 2800.8953297411886 3229.3336113905866 2461.8146560773425 2499.37151051755 2127.6706910589005 2236.0235514913884 2928.205985116244 2095.1837928451237 2743.3129522702598 2706.4415637657844 0.98082711611619 1.034899614031932 1.1932027850242006 0.9096130834807074 0.9234899227012632 0.7861506117643371 0.8261857863208955 1.0819394825735285 0.7741470648750505 1.0136235671954328 1.0 11.402181523047009 -6.396298598936585 8.167630758633402 0.8947317073238678 1.0658372700315286 0.2987226499299943 0.1029345186730012 0.2563339156814275 15.862705388254131 0.015345067277651853 0.03574129672716003 4.015146547402126e-07 6.396298598936585 0.17110556270766086 S(ph)RSTCGDSEVEEESPGKR ddPTM_A549_MK2206_60min_R1 2 SRSTCGDSEVEEESPGKR 18 2 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 S(0.464)RS(0.464)T(0.071)CGDSEVEEESPGKR;S(0.379)RS(0.379)T(0.239)CGDS(0.004)EVEEESPGKR 70.335 0.00024873 20214100.0 2957.3 2848.1000000000004 2177.0 2268.84 2568.0 2788.7 1922.9700000000003 2135.8999999999996 3081.5 3254.4 4409.5 True False 3456.4199409567173 2993.0561247813266 2485.731335303666 2824.705901852099 2190.250601809029 3083.7983830107582 2272.3487576731463 2438.670365919416 2383.5451701443358 2519.2287797210397 3314.4994539910967 1.042818075228442 0.9030190429439625 0.7499567792387222 0.8522269926612233 0.660808858837396 0.9303964070042179 0.6855782567521431 0.7357582644893585 0.719126734890311 0.7600631150165236 1.0 11.694575299865889 -10.926351911841241 1.2057756699022861 0.9990488687760779 0.7973461413663667 0.0 0.13083231052025268 0.46009893651947037 1.1975636480237242 0.07573367472653826 0.018213287365301145 1.1848083006791317e-11 10.926351911841241 -0.20170272740971118 S(ph)RSTSSLR ddPTM_A549_PD325901_60min_R1 1 SRSTSSLR 8 1 Q08499-10 Q08499-10 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 S(0.824)RS(0.166)T(0.01)S(0.001)SLR 91.65799999999999 0.0021636 24943000.0 1551.6 1958.9 1782.8 1931.5 1928.7 1808.1 2051.3 2065.2 3093.0 3662.0 4146.4 True False 1709.11728977245 2123.983377760147 1903.7915288473052 2050.804368245228 1793.2347656537886 1793.375433073644 2129.3633440144304 2024.0079658819411 2963.011966197236 3430.7806950391696 3636.419086195222 0.4700000877953526 0.5840865223217345 0.5235346872076944 0.5639626015688364 0.4931320409304216 0.493170723881017 0.5855659904816909 0.5565937032850788 0.8148158658185433 0.9434503047416322 1.0 11.828302759973612 -8.996501459865298 0.9529424000607936 0.9555867081451409 0.5200119792969558 0.9280060965030267 0.04831403436105555 0.08278677727582746 0.155301452984892 0.012904661274745903 0.01200360875873574 1.0080882207062637e-09 8.996501459865298 -0.43557472884818516 down S(ph)RSTTELDDYSTNK ddPTM_A549_MK2206_60min_R1 3 SRSTTELDDYSTNK 14 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.49)RS(0.3)T(0.158)T(0.051)ELDDYSTNK;S(0.706)RS(0.147)T(0.147)T(0.001)ELDDYSTNK;S(0.492)RS(0.492)T(0.013)T(0.002)ELDDYSTNK 190.19 1.6390000000000004e-26 91098300.0 10535.3 9786.3 8954.5 8685.5 13110.7 12431.0 11204.6 10945.400000000001 17955.1 16912.4 16455.1 True False 12313.401076644672 10284.380869333065 10224.38274780738 10813.447889906916 11182.133397639273 13746.440168970023 13240.330785308415 12496.943968881675 13888.298518402897 13091.87709382808 12368.844532343548 0.9955174911000056 0.8314746654338021 0.8266239195643077 0.8742488323489399 0.9040564272918848 1.1113762593607002 1.0704581782628118 1.0103566211219777 1.1228452651406602 1.0584559503188724 1.0 13.594423113063536 -7.166318637516191 5.238858867478259 1.0596250089504584 0.8765553265371608 0.726367890460768 0.05372700459252989 0.1028749950033814 4.460694675638055 0.009004879138571077 0.01576191954156709 6.818382526755756e-08 7.166318637516191 -0.18306968241329757 S(ph)RSTTELDDYSTNK ddPTM_A549_PD325901_60min_R1 2 SRSTTELDDYSTNK 14 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.472)RS(0.472)T(0.052)T(0.005)ELDDYSTNK;S(0.422)RS(0.422)T(0.151)T(0.005)ELDDYSTNK 147.84 8.750700000000001e-14 121269000.0 15654.8 14615.900000000001 16037.2 14555.3 15992.2 15133.5 14931.400000000001 15550.0 16955.0 16757.4 19712.1 True False 17244.06377154534 15847.633187505513 17125.580831517844 15454.34782351528 14868.963042094938 15010.257793495939 15499.622597775595 15239.843051260983 16242.44031260075 15699.334904164223 17287.63666529732 0.9974795343865918 0.9167032772800908 0.9906259116317049 0.8939537614495261 0.8600922919639123 0.8682654595365876 0.8965726720118471 0.8815457743771874 0.9395408190875121 0.9081249917566 1.0 14.077453036019499 -9.777935975488305 0.959350626331769 0.9909260028147445 0.9126047754093836 0.0 0.04963834113512922 0.4031793516856163 0.7665561942774519 0.015017106866153351 0.009016757511474138 1.6674930193981348e-10 9.777935975488305 -0.07832122740536096 S(ph)RSVPSSLQASAR ddPTM_A549_PD325901_60min_R1 1 SRSVPSSLQASAR 13 1 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 1 S(0.586)RS(0.414)VPSSLQASAR 57.93600000000001 0.0034919000000000005 11574000.0 3017.5 2978.4 2780.1 2843.9 2638.0 3042.5 2793.8 2711.8 3965.1 3204.3 3342.1 True False 3323.8343786339074 3229.4002206957102 2968.774304099389 3019.5612440344844 2452.7159806059462 3017.7228887376605 2900.1195878260223 2657.7110216340534 3798.460636006678 3001.979951150742 2931.042887317444 1.134010830416731 1.1017922100932918 1.0128730346953325 1.0302002939295283 0.8368065821277445 1.0295730921561328 0.9894497280728214 0.9067458661672637 1.295941677429058 1.0242019876748447 1.0 11.517198362504459 -8.745313756655193 24.999726960826933 1.1397502608336656 1.0041683449453662 0.13528746541621306 0.10565099071200341 297.3017266566478 460909.9483227667 0.021747445775545625 0.024622351106668796 1.7975717876577284e-09 8.745313756655193 -0.13558191588829938 S(ph)RSVS(ph)PCSNVESR ddPTM_A549_PD325901_60min_R1 1 SRSVSPCSNVESR 13 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.501)RS(0.501)VS(0.988)PCS(0.005)NVES(0.005)R 67.449 0.0012725 10660000.0 770.97 849.88 912.42 775.11 1096.5 981.78 702.15 956.73 1042.6 1142.2 1106.1 True False 849.238306841884 921.5023702541197 974.3423080271801 822.9867842974676 1019.485622719644 973.7847091881217 728.8707024812228 937.6472696098343 998.783147739165 1070.081297070929 970.0567121456048 0.8754522248122065 0.9499469038422599 1.0044178817876497 0.8483903817099075 1.0509546606452633 1.0038430712306203 0.7513691656945308 0.9665901569155826 1.029613150688914 1.1031121002235904 1.0 9.921925283403887 -8.527432184586878 21.929374973073745 1.0131481309253696 0.9295941400985746 0.2564415577516289 0.0831652964653464 33.58057501724997 161720.2930732602 0.012866607933587881 0.014631254209103602 2.9687102736354625e-09 8.527432184586878 -0.08355399082679504 S(ph)RSYDR ddPTM_A549_MK2206_60min_R1 1 SRSYDR 6 1 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 S(0.904)RS(0.095)Y(0.001)DR 45.081 0.033858 28559000.0 598.27 384.01 227.79 179.49 279.0 378.17 270.5 305.17 240.18 887.5 909.74 True False 699.2433497028285 403.55446876067447 260.0940472525594 223.4650580576123 237.95946958906507 418.1876983910706 319.64634859128637 348.42878204392895 185.7796134886472 687.0131336044806 683.8264504533076 1.0225450466844344 0.590141648503299 0.38035096051073103 0.3267862158731614 0.3479822540226721 0.6115406885970184 0.467437824874123 0.5095280853979193 0.27167655384709694 1.0046600758848396 1.0 9.417486417166963 -10.936641645080572 1.176321862550966 1.002024897517806 0.4750912853285827 0.48423426457610597 0.19632901328805308 0.33762156751001837 0.8249487867474093 0.14472755573416513 0.03341779012482922 1.1570665934477297e-11 10.936641645080572 -0.5269336121892234 S(ph)RSYER ddPTM_A549_PD325901_60min_R1 3 SRSYER 6 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4;Q96S94;Q96S94-3;A0A0A0MSF3 O75494-2;Q5JRI1;Q96S94 SRSF10;CCNL2 Serine/arginine-rich splicing factor 10;Cyclin-L2 1 S(0.919)RS(0.081)YER;S(0.874)RS(0.126)YER;S(0.91)RS(0.09)YER 66.07300000000001 0.015752000000000002 159824000.0 4275.42 4307.59 3886.76 4358.84 5206.21 4047.33 3931.22 3758.49 4485.0 4805.2 4769.05 True False 4709.4574910021465 4670.605726788421 4150.5389065865775 4628.0756471561135 4840.543770049466 4014.3698863679856 4080.824728346125 3683.523968471635 4296.5110470076315 4501.798851939436 4182.487083498776 1.125994509243659 1.1167053558193702 0.992361440388365 1.1065367459030118 1.1573362148915964 0.959804491018259 0.9756933247794737 0.8807018156742893 1.027262239244854 1.076344950281005 1.0 12.030145369551887 -7.270844314978613 24.996974514825926 0.9957440483789743 1.0951336865070125 0.47179136606549565 0.05909581228142041 505.84501390118106 1344462.7683401543 0.008531702431281882 0.013742564123200898 5.3598876326338186e-08 7.270844314978613 0.09938963812803814 S(ph)RT(ph)GSESSQTGTSTTSSR ddPTM_A549_PD325901_60min_R1 2 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.484)RT(0.596)GS(0.447)ES(0.438)S(0.033)QT(0.001)GTSTTSSR;S(0.6)RT(0.6)GS(0.6)ES(0.157)S(0.039)QT(0.002)GTSTTSSR 62.765 0.0014925999999999997 18274100.0 247.96 0.0 505.32 433.28999999999996 168.51 490.61 300.5 306.23 333.89 510.33 417.92999999999995 True False 273.13271666149575 0.0 539.614053936011 460.0533392270126 156.67443892794094 486.6146348212273 311.9356919399097 300.1220024172125 319.8577644337518 478.1076767065371 366.52725947655057 0.7451907316568088 0.0 1.4722344381879027 1.2551681418839888 0.42745644389913257 1.3276355911867985 0.8510572784829024 0.818825870811973 0.8726711483630195 1.3044259719982032 1.0 8.517776688677268 -5.753333567756062 24.999956593278537 0.9640892943819569 0.3725955171730281 0.3596968753847253 0.3303013093262089 134.93380377595938 416152.85084580985 0.038757775541383196 0.14499604182714385 1.7646819040822785e-06 5.753333567756062 -0.5914937772089288 S(ph)RT(ph)PLLPR ddPTM_A549_MK2206_60min_R1 2 SRTPLLPR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(1)PLLPR;S(1)RT(1)PLLPR 63.283 0.005305600000000001 140136000.0 2769.8999999999996 2545.5 1851.94 1560.49 6293.6 3899.3 2892.3 3584.0 6464.8 3352.1 4229.7 True False 3237.391402446828 2675.0550772904257 2114.5729394130776 1942.8101200530575 5367.819777081509 4311.921337854142 3417.7934714623952 4092.042975539671 5000.533122164239 2594.8582818654413 3179.3487562186497 1.0182561432163268 0.8413845986723381 0.6650962513241359 0.6110717222365167 1.688339401766578 1.3562278530847665 1.0749979739647497 1.287069550811573 1.5728167953840995 0.8161603148412159 1.0 11.634515565142333 -6.744984080986164 24.999849107522817 1.2932481418948765 0.7795647320474318 0.443337488907245 0.2525847521126354 166.37917579246542 252771.5912093778 0.0367568493257641 0.07634445907735597 1.7989368537419084e-07 6.744984080986164 -0.5136834098474446 S(ph)RT(ph)PLLPR ddPTM_A549_PD325901_60min_R1 2 SRTPLLPR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(1)PLLPR;S(1)RT(1)PLLPR 50.878 0.016175 190134000.0 3082.6 3175.5 3608.5 2973.7 3449.3 3348.8 2879.6 3666.2 3091.3999999999996 4140.7 4269.4 True False 3395.5432827098207 3443.110529418221 3853.3945096732673 3157.3786952372943 3207.0330674390066 3321.5284830911014 2989.1847537775816 3593.074764921739 2961.4792086330845 3879.2554953437166 3744.2908659564628 0.9068588430408822 0.9195627830955632 1.0291386667389513 0.8432514482100085 0.8565128036920775 0.8870914685851019 0.7983313425128385 0.959614221638175 0.7909319320139375 1.03604544471007 1.0 11.870476796125482 -6.28482750718744 24.853679615260372 0.8887987245579481 0.9486244024730734 0.08230044241534973 0.07920959239763445 1348.5659032778904 1433067.8894259648 0.011878012677070027 0.02761760726092185 5.190061365323191e-07 6.28482750718744 0.059825677915125386 S(ph)RT(ph)PPAIR ddPTM_A549_PD325901_60min_R1 2 SRTPPAIR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(1)PPAIR;S(1)RT(1)PPAIR 47.302 0.020146999999999998 247930000.0 1681.88 1980.42 1820.29 1758.74 2733.7 1445.48 1715.9 1533.67 1584.4499999999998 2166.46 2258.43 True False 1852.623219465384 2147.316943684594 1943.8258256929885 1867.373375411655 2541.694342753024 1433.7084901273658 1781.1995134765077 1503.0797487091602 1517.8610765732965 2029.6693458696232 1980.6574273673248 0.9353577220710383 1.0841435343712074 0.9814043553592745 0.9428048230903584 1.2832579261984873 0.7238548525945956 0.8992971166367043 0.7588792124981667 0.766342051684741 1.02474527791888 1.0 10.951763659298154 -7.285267508702333 24.99915951844707 0.86663389886423 1.0382921615240133 0.347792994498336 0.12466981258413605 754.8994495188892 791996.8869017628 0.019225162506329017 0.03074337556298824 5.184805764511211e-08 7.285267508702333 0.17165826265978323 S(ph)RT(ph)PPSAPSQSR ddPTM_A549_MK2206_60min_R1 4 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.951)RT(0.937)PPS(0.111)APSQSR;S(0.996)RT(0.992)PPS(0.01)APS(0.001)QS(0.001)R;S(0.999)RT(0.999)PPS(0.002)APSQSR;S(0.999)RT(0.999)PPS(0.002)APSQSR 67.646 0.0024703000000000004 174983400.0 1940.1 2134.6000000000004 2090.54 1677.06 2468.4399999999996 1462.81 1983.1999999999998 1683.3899999999999 2547.16 2962.64 3671.1600000000003 True False 2267.5414491090264 2243.242022386228 2387.01000721439 2087.939775286084 2105.335745922694 1617.6035832653079 2343.5217690433965 1922.0156876656604 1970.2323269786923 2293.3775663571582 2759.5096531384406 0.8217189769675602 0.8129132724123462 0.8650123780141882 0.7566343436818321 0.7629383515757074 0.5861923988653484 0.8492529701347725 0.6965062381571004 0.7139791392785712 0.8310815523869822 1.0 11.430196216943136 -10.771673846706097 0.9786640067751347 1.002527873339091 0.7605072725871468 0.2358368822625082 0.08913063701105636 0.3243899498839151 0.5425120411240488 0.05540746416306014 0.013459682831948141 1.6917109223543848e-11 10.771673846706097 -0.2420206007519442 S(ph)RT(ph)PPSAPSQSR ddPTM_A549_PD325901_60min_R1 2 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(0.994)PPS(0.006)APSQSR;S(0.996)RT(0.994)PPS(0.01)APSQSR 85.57600000000001 0.00020469999999999996 267190000.0 2223.48 2353.8 1992.63 1815.4299999999998 2593.9 2377.5 2142.7 2389.5 2299.8 2738.4 2771.3 True False 2449.2060527605363 2552.1629866618173 2127.8618544575966 1927.564987959325 2411.713412469208 2358.138428257612 2224.241621030431 2341.8395479735145 2203.147403769932 2565.496956661732 2430.4476687181227 1.0077180777368093 1.0500793822925183 0.8755020245220432 0.7930905128173238 0.9922918495674521 0.9702485918988544 0.9151571743997065 0.9635424691981366 0.9064780254791192 1.0555656020418813 1.0 11.247006355676614 -11.004571550326792 1.276081630231067 1.0001059917647945 0.9370287508921158 0.16207487810814147 0.06876455263988125 0.8995211443211559 2.600338985476414 0.04918696621550918 0.011109027646441748 9.895288248568044e-12 11.004571550326792 -0.06307724087267874 S(ph)RT(ph)PPTSR ddPTM_A549_MK2206_60min_R1 2 SRTPPTSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.999)RT(0.711)PPT(0.268)S(0.021)R;S(0.998)RT(0.986)PPT(0.015)S(0.001)R 66.321 0.0077916 196783000.0 4642.17 5057.21 4926.110000000001 3998.48 5919.6 4551.1 3958.3599999999997 4543.93 6398.700000000001 6457.570000000001 7533.5 True False 5425.654805840141 5314.6003879096115 5624.706471360928 4978.10777949859 5048.834681646702 5032.694381224321 4677.542774158237 5188.045992702004 4949.404666624227 4998.800452022855 5662.724035977306 0.958135125669028 0.9385236423572929 0.9932863469286445 0.8791012501882303 0.8915911581722249 0.8887408867622398 0.82602343756117 0.9161749645118669 0.8740324683277683 0.882755440714344 1.0 12.46728050870831 -4.07972664016639 15.754937416753807 0.9255993610710822 0.9177359897408867 0.0 0.052672836878226395 0.0 0.0 0.008117535906477832 0.0 8.322874765330973e-05 4.07972664016639 -0.007863371330195545 S(ph)RT(ph)PPTSR ddPTM_A549_PD325901_60min_R1 1 SRTPPTSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.995)RT(0.968)PPT(0.015)S(0.022)R 53.753 0.012981999999999999 242260000.0 824.32 842.24 945.59 974.55 823.08 667.0 1020.1 1036.2 862.45 790.73 979.75 True False 908.0043595676893 913.2185206415367 1009.763423694594 1034.745740136364 765.2697002718513 661.5681731431451 1058.9204637201392 1015.5321781168259 826.204225750664 740.8031728531743 859.2469611469629 1.0567443361750652 1.0628126277252468 1.175172528217865 1.2042471919308706 0.8906283465353588 0.7699394970917943 1.2323819711932908 1.1818862609199643 0.9615445420345835 0.8621539631217499 1.0 9.746929034078484 -6.698280620726888 0.3290315309990438 0.9849517075628196 1.133830834663744 0.08550195918090853 0.14056278334148842 6.636948556653166 0.9861495121856448 0.05991245684926493 0.35481433828236086 2.003177249903055e-07 6.698280620726888 0.14887912710092444 S(ph)RT(ph)PPVTR ddPTM_A549_MK2206_60min_R1 2 SRTPPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.972)RT(0.735)PPVT(0.293)R;S(0.989)RT(0.915)PPVT(0.096)R 49.28 0.01795 1166440000.0 1803.97 1564.9099999999999 1434.74 1433.69 4052.6 2086.7 2163.11 2303.75 3648.3 1815.65 3024.0 True False 2108.436033167986 1644.5572347289583 1638.2077060236938 1784.9441143607896 3456.4679084467593 2307.5132089606445 2556.119087250637 2630.313617438482 2821.9658751379447 1405.4934039763104 2273.057341845803 0.9275771421832505 0.7235001090617097 0.7207067221161307 0.7852613664868445 1.5206250387154707 1.0151583800727448 1.1245290825681407 1.1571699354062817 1.2414846837283957 0.6183272978212684 1.0 11.150418363781817 -6.591984607174111 24.99980588465388 1.1370732087077773 0.7787267733103723 0.31844997909174744 0.21103583317812408 26.225127230534397 9486.85862354758 0.02085380473868762 0.043410659925599476 2.558676573217988e-07 6.591984607174111 -0.35834643539740496 S(ph)RT(ph)PPVTR ddPTM_A549_PD325901_60min_R1 2 SRTPPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.984)RT(0.974)PPVT(0.041)R;S(0.995)RT(0.99)PPVT(0.014)R 55.801 0.010708 950210000.0 1358.83 1247.16 1336.5700000000002 1158.5 1195.07 923.12 906.8299999999999 971.07 1192.8 1495.05 1712.01 True False 1496.7774212822242 1352.2625501084005 1427.2776776483295 1230.0579138556022 1111.132405967684 915.602416779461 941.3399118864158 951.7012470603227 1142.670764073734 1400.6522878531705 1501.4436233255549 0.9968921896427949 0.9006415752815731 0.9506035761016755 0.8192501501529181 0.7400427087009976 0.6098147160207645 0.626956548525903 0.6338574637603741 0.76104806489026 0.9328703829390935 1.0 10.552134589809825 -6.268913591972763 10.062817764514318 0.814258605476117 0.944545632724845 0.2422314727878816 0.12470362946994978 0.3779427642979075 470.46909541713705 0.022835710294056188 0.05535325101049505 5.383768883148049e-07 6.268913591972763 0.1302870272487281 S(ph)RT(ph)PTTR ddPTM_A549_MK2206_60min_R1 1 SRTPTTR 7 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(0.997)PT(0.002)T(0.002)R 74.165 0.038891 81368000.0 2507.3 2180.4 1364.8 1143.4 4924.7 2906.0 1884.8 2436.4 5222.6 2974.8 2725.2 True False 2930.4709424004254 2291.3730467586133 1558.349162343795 1423.533051329176 4200.28315371064 3213.51099115332 2227.243762753628 2781.767161162068 4039.689438778454 2302.7906139116712 2048.4576283062775 1.430574351114805 1.11858454629261 0.7607426879667909 0.6949292148679654 2.050461330353976 1.5687466251427136 1.0872784147335162 1.3579813039443298 1.9720639484833198 1.1241582847948304 1.0 11.000322336101426 -6.738647208851294 24.99986651233361 1.4750878411263932 0.9924157942502553 0.2609737881450168 0.36304964135583895 289.00694966990403 316999.11813216377 0.06174948021376157 0.12847344654376094 1.825377912448188e-07 6.738647208851294 -0.48267204687613796 S(ph)RT(ph)SPITR ddPTM_A549_MK2206_60min_R1 2 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.741)RT(0.67)S(0.587)PIT(0.002)R;S(0.855)RT(0.629)S(0.516)PITR 55.353 0.011205 99426000.0 1232.22 1091.5 1231.89 971.89 2195.2 1344.76 1243.17 1521.78 2502.6 1771.19 1774.7 True False 1440.18861111341 1147.0526878265575 1406.590525791103 1210.0030936297999 1872.2889879638553 1487.061610620557 1469.0378971468742 1737.4969752557931 1935.765095830995 1371.0769488551205 1333.9930107717423 1.0796073138945692 0.8598640911641389 1.054421210930754 0.9070535481514916 1.403522336957896 1.1147446790296611 1.101233578650465 1.3024783197706677 1.4511058755181299 1.0277991996839055 1.0 10.38153539245043 -6.743229478539082 24.998916402344 1.2193134567294726 0.9726516554897974 0.34508507277913036 0.14751908216430484 242.90249119487294 333459.71626338287 0.02566313636837591 0.05333925738780454 1.8062194785300628e-07 6.743229478539082 -0.24666180123967518 S(ph)RT(ph)SPVSR ddPTM_A549_MK2206_60min_R1 1 SRTSPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.821)RT(0.63)S(0.538)PVS(0.011)R 45.82899999999999 0.024381 26630000.0 2080.5 1755.6 1190.4 1245.5 2807.7 1882.2 1290.3 1711.8 2489.3 2187.2 2342.8 True False 2431.6375366585903 1844.952541226113 1359.2166199106493 1550.6475559126195 2394.691049337701 2081.3731546967574 1524.7308080862729 1954.4528921676376 1925.4775245952596 1693.110000923628 1761.0181020093742 1.3808134816354354 1.0476624511247028 0.771835688889139 0.8805403840785534 1.3598332956403383 1.1819146846485273 0.8658234724257006 1.1098425904523914 1.093388831380116 0.9614381584106029 1.0 10.7821940237829 -5.263159228628254 7.40011127037219 1.0389791924317258 1.384644304687859 0.2974087153395748 0.15531935049947768 0.0958492649665636 48.86317986342905 0.02077329220425608 0.16788683768681134 5.455578024888729e-06 5.263159228628254 0.34566511225613317 S(ph)RT(ph)SPVSR ddPTM_A549_PD325901_60min_R1 1 SRTSPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.868)RT(0.623)S(0.508)PVS(0.001)R 48.998000000000005 0.018262999999999998 53634000.0 1666.7 1668.1 1303.5 1024.4 1568.3 1094.2 705.48 1050.9 1394.4 1569.3 2447.4 True False 1835.9021570403095 1808.6766411974588 1391.9633485822649 1087.6748614188 1458.1480183412837 1085.2891979808542 732.3274274534692 1029.9389750848989 1335.79821715662 1470.2141301815866 2146.3853153468503 0.8553460293980965 0.8426616732164799 0.6485151284951496 0.5067472525281578 0.6793505378160168 0.505635772953224 0.34119103509386756 0.47984812778989006 0.6223478177965257 0.6849721341594269 1.0 11.067693374102591 -10.405324110194238 0.8901607758886961 0.9865551545997929 0.6050240134934978 0.1398971796231251 0.17015672625814066 0.3938537222191669 0.5896701846611927 0.08887566059508317 0.03043582532737089 3.9325648202440425e-11 10.405324110194238 -0.38153114110629516 S(ph)RT(ph)SPVTR ddPTM_A549_MK2206_60min_R1 1 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.988)RT(0.684)S(0.328)PVTR 59.04 0.007109100000000001 197510000.0 1538.2 1408.4 969.26 838.9 1842.0 1159.3 943.19 1215.8 1836.5 1798.0 1755.0 True False 1797.8105546206416 1480.0815442372173 1106.7156426533902 1044.4305376596524 1571.0442400826462 1281.9763565189414 1114.555414150889 1388.1433732313426 1420.53568228787 1391.8305512347679 1319.1850644640824 1.3628190638672826 1.1219665717171372 0.8389388816367416 0.7917240467575725 1.1909202752540875 0.9717941713051027 0.8448817714621989 1.0522734153265103 1.0768282029215979 1.0550684575861216 1.0 10.365431254752668 -5.368147264421302 3.5558738278145747 1.0046086382871917 1.370635226706954 0.47802858105255 0.11531427799357974 0.1692009044126091 3.423639689428286 0.015853739668593193 0.13389355973390946 4.2840322900242e-06 5.368147264421302 0.3660265884197622 S(ph)RT(ph)SVQTEDDQLIAGQSAR ddPTM_A549_PD325901_60min_R1 2 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 2 S(0.552)RT(0.552)S(0.552)VQT(0.343)EDDQLIAGQSAR;S(0.635)RT(0.635)S(0.635)VQT(0.094)EDDQLIAGQSAR 66.38600000000001 0.00096534 14223000.0 719.54 754.87 735.6 1102.78 869.65 712.29 703.44 1115.71 928.6199999999999 828.94 891.3199999999999 True False 792.5871711026484 818.4855441164956 785.5222395221436 1170.8962160049048 808.568784129629 706.4893463989966 730.2097941371381 1093.4562887924371 889.5933307630373 776.6005869322144 781.6932905430073 1.0139362595169183 1.0470673779839281 1.0048982753535938 1.497897231779405 1.0343811235324183 0.9037935401853459 0.9341384952017359 1.3988303366821302 1.1380337295016012 0.9934850360462283 1.0 9.610458844609406 -10.774693882013867 1.1833568890415116 1.0036754084227901 1.1108134380480417 0.05539113575347099 0.17542384086309298 1.2664410316065584 3.305964841908917 0.10191492556268891 0.029635299411568405 1.6799877616142762e-11 10.774693882013867 0.10713802962525154 S(ph)RTGSESSQTGTSTTSSR ddPTM_A549_MK2206_60min_R1 3 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.452)RT(0.452)GS(0.078)ES(0.014)S(0.003)QTGTSTTSSR;S(0.333)RT(0.333)GS(0.333)ESSQTGTSTTSSR;S(0.333)RT(0.333)GS(0.333)ES(0.001)SQTGTSTTSSR 101.6 2.0731e-09 170503000.0 266.6 456.92999999999995 347.49 210.201 428.89 276.83 257.82 273.8 894.5899999999999 1136.15 1087.13 True False 311.59556225579445 480.1857852941722 396.7693071679701 261.7002544362813 365.80084914714746 306.123966855118 304.6625567238649 312.61198847733306 691.966793366679 879.4929259095553 817.1656177383696 0.38131261948854706 0.5876235794442252 0.48554332017307533 0.3202536288305627 0.4476459131498423 0.374616797635665 0.37282840847742094 0.38255646308582386 0.8467889230114729 1.0762725533456559 1.0 9.674484693696746 -8.839459892892673 3.8720729015414683 0.9349360428910679 0.4206045697915288 0.8964655449718308 0.08404113280577928 0.049553558668687964 1.4003999272109706 0.015119121949862055 0.01606899126487421 1.4472384994388661e-09 8.839459892892673 -0.5143314730995391 down S(ph)RTGSESSQTGTSTTSSR ddPTM_A549_PD325901_60min_R1 3 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.321)RT(0.321)GS(0.321)ES(0.017)S(0.021)QTGTSTTSSR;S(0.5)RT(0.5)GSESSQTGTSTTSSR;S(0.313)RT(0.313)GS(0.313)ES(0.028)S(0.032)QTGTSTTSSR 123.14 5.1959e-11 247990000.0 707.44 631.99 568.76 366.016 657.41 868.1400000000001 618.48 618.23 618.71 718.9599999999999 810.5 True False 779.2587880101976 685.2500152690982 607.3594738317215 388.62397703735184 611.235789541378 861.0701556709 642.0165948452423 605.8989176579475 592.7077703219819 673.5647429015188 710.8136381828153 1.0962912726356253 0.9640361108165142 0.854456697516985 0.5467311770084538 0.8599100477362722 1.2113866552591945 0.9032136700226353 0.8524019308449389 0.8338441167747297 0.9475968196438622 1.0 9.473327551993815 -7.036217253450174 24.994596565646308 0.9347422506676932 0.8506047664368453 0.0698907746341646 0.15506388080078706 1472.5693754644562 1016261.658079513 0.024158566049704795 0.04185337132986483 9.19989237015611e-08 7.036217253450174 -0.08413748423084788 S(ph)RTPLDKDLINTGICESSGK ddPTM_A549_MK2206_60min_R1 2 SRTPLDKDLINTGICESSGK 20 2 O95714 O95714 HERC2 E3 ubiquitin-protein ligase HERC2 1 S(0.583)RT(0.417)PLDKDLINTGICESSGK;S(0.5)RT(0.5)PLDKDLINTGICESSGK 138.62 3.6048e-18 7523200.0 1739.4699999999998 2607.3 2074.98 2075.8599999999997 2802.5 2176.8 2722.43 1996.9299999999998 3637.3 3150.5 3793.3999999999996 True False 2033.0500100415845 2740.0004333212855 2369.243365240421 2584.4457931888974 2390.255962449302 2407.1475311571053 3217.0602912952872 2280.000942841639 2813.457357574555 2438.799861882722 2851.394087486068 0.7130021132343805 0.9609336167688441 0.8309070204074332 0.9063797265103661 0.8382762568455318 0.8442002253288555 1.1282412015280598 0.7996091991801112 0.9866953747017971 0.8553008763628636 1.0 11.477451730732366 -2.000000000009436 0.1507848454738856 1.031875781738262 0.17106752811748333 0.09868338860733572 0.10399302317636813 51.37203574097854 0.4825524266129394 0.1516254873928408 9.769532427613605 0.009999999999782728 2.000000000009436 -0.8608082536207786 S(ph)RTPLDKDLINTGICESSGK ddPTM_A549_PD325901_60min_R1 2 SRTPLDKDLINTGICESSGK 20 2 O95714 O95714 HERC2 E3 ubiquitin-protein ligase HERC2 1 S(0.5)RT(0.5)PLDKDLINTGICESSGK;S(0.5)RT(0.5)PLDKDLINTGICESSGK 142.21 1.6457000000000001e-21 12711200.0 3103.1000000000004 3111.8 3621.5 3819.8999999999996 3411.1000000000004 3667.1 3870.5 3722.8 3225.5 3482.2999999999997 4424.0 True False 3418.1244276185166 3374.0423068630507 3867.276767848616 4055.846547377657 3171.516103656161 3637.2363534231304 4017.7939955188685 3648.5458335198973 3089.9434519783968 3262.4269837069637 3879.876046046611 0.8809880488582632 0.8696263145573998 0.996752659608589 1.045354670933457 0.8174271719035375 0.9374619988515567 1.0355469988822938 0.9403769064317333 0.7964026209360183 0.8408585596519778 1.0 11.921794846710982 -8.572477605255042 24.99992078520878 0.9019901360343141 0.9425729424259541 0.0846702980671118 0.08058700688343613 334.6593906055954 168680.9391092689 0.01627978731628771 0.018459544685561574 2.676223591267569e-09 8.572477605255042 0.040582806391640025 S(ph)RTPLLPR ddPTM_A549_MK2206_60min_R1 2 SRTPLLPR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.618)RT(0.382)PLLPR;S(0.871)RT(0.129)PLLPR 73.067 0.0014944000000000001 8911600.0 1337.83 1207.96 1187.6799999999998 992.76 2450.1 1506.55 1368.99 1403.8899999999999 2558.24 2028.08 1920.2800000000002 True False 1563.6229971968094 1269.4400043856783 1356.1108830103149 1235.9862445666895 2089.6935356278436 1665.9721210330458 1617.7177625064144 1602.8957067328101 1978.8027246698175 1569.935319437268 1443.421478968142 1.083275411915441 0.8794659237668835 0.9395113643311981 0.8562892146029712 1.447736206005263 1.1541827146870494 1.1207521753541254 1.1104834797655023 1.370911236601802 1.0876485782652803 1.0 10.495276912856394 -6.728138219821958 24.999994615033568 1.1838709931774822 0.9353287041675749 0.4464301446762412 0.1311491967787955 163.05858415641777 122411.35328347562 0.022423907623043002 0.046676928837369416 1.87008686637168e-07 6.728138219821958 -0.24854228900990738 S(ph)RTPLLPR ddPTM_A549_PD325901_60min_R1 1 SRTPLLPR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.856)RT(0.144)PLLPR 44.425 0.01662 3559200.0 859.54 764.86 876.25 741.89 906.67 933.6 823.67 908.24 823.6 803.4 1065.8 True False 946.7998680400958 829.3174364764038 935.7175943193013 787.7148603455613 842.9886270416963 925.9970711340932 855.0152125795179 890.124440699504 788.9869561461503 752.6731868908979 934.713356662856 1.0129307143105257 0.8872425226031432 1.0010743803426867 0.8427341438212529 0.9018686007134441 0.9906749106914637 0.914735203562428 0.95229669540345 0.8440950913154993 0.8052449251159909 1.0 9.868380199348946 -5.2433430966719445 23.09217648092331 0.9260777347870695 1.0129309280558985 0.13806230972931854 0.06497552987389313 2078.7556980556487 2652522.0680706115 0.008633418921646407 0.33632529352490487 5.7102734153142086e-06 5.2433430966719445 0.08685319326882901 S(ph)RTPPKK ddPTM_A549_MK2206_60min_R1 1 SRTPPKK 7 2 Q5VV67-2;Q5VV67;X6R7H2 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 S(0.5)RT(0.5)PPKK 51.727 0.010076 7632500.0 2423.7 2326.4 1251.4 1071.1 1447.3 1551.1 1144.6 1295.3 1574.7 3524.4 3500.4 True False 2832.761306224188 2444.8038231421924 1428.8673371607747 1333.5195480835057 1234.4040872267162 1715.23637246315 1352.5590040576196 1478.9127416898816 1218.032964279177 2728.235592197895 2631.1540738746867 1.0766231192431126 0.9291754699647553 0.5430572657634595 0.5068192552174415 0.4691492982046884 0.651895071251856 0.5140554167798376 0.5620775903525889 0.4629272669256798 1.0368969340439438 1.0 11.361480016292717 -10.931174878821551 1.1951337519063625 0.9994604984237604 0.6129863109579989 0.3720207277340769 0.18888882664268614 0.445218069380424 1.1325082526232093 0.14035099014271446 0.03321057647434639 1.1717234487133662e-11 10.931174878821551 -0.38647418746576145 S(ph)RTPPKK ddPTM_A549_PD325901_60min_R1 1 SRTPPKK 7 2 Q5VV67-2;Q5VV67;X6R7H2 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 S(0.5)RT(0.5)PPKK 47.823 0.012025 9929500.0 1235.1 1501.3 882.99 974.79 869.15 1090.9 704.86 653.28 971.33 1352.0 1748.6 True False 1360.4864427674358 1627.819819812808 942.9150112502145 1035.000564391285 808.1039024047233 1082.0160720867427 731.6838330141918 640.2498179117545 930.5083779910636 1266.6344892662357 1533.5332852886759 0.8871580785488687 1.061483200546497 0.6148643921170045 0.6749123571820315 0.5269555673534689 0.7055706468627849 0.47712289001699626 0.41749978566081947 0.6067741645502677 0.8259582634541913 1.0 10.582643765254474 -4.423735019011075 16.380004729229558 0.7426035965851686 0.7050877267486442 0.0 0.2043121847550397 110834064.39781497 0.0 0.03201362201649408 0.0 3.7693371165259965e-05 4.423735019011075 -0.03751586983652444 S(ph)RTPPSAPSQSR ddPTM_A549_MK2206_60min_R1 6 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.5)RT(0.5)PPSAPSQSR;S(0.644)RT(0.356)PPSAPSQSR;S(0.603)RT(0.397)PPSAPSQSR;S(0.5)RT(0.5)PPSAPSQSR;S(0.5)RT(0.5)PPSAPSQSR;S(0.5)RT(0.5)PPSAPSQSR 109.16 2.866e-05 920021100.0 5881.129999999999 6112.61 5502.009999999999 3894.3100000000004 6373.03 4653.12 4658.47 4549.38 7262.289999999999 8533.68 8080.49 True False 6873.720964176369 6423.715739931736 6282.27775110433 4848.416124822221 5435.565729301792 5145.510069908925 5504.853698787616 5194.268546891932 5617.392910494076 6605.915761101841 6073.881322821297 1.131685095385359 1.0575965183573823 1.0343102568533944 0.7982401807235424 0.8949081222378891 0.8471535409451915 0.9063156499459938 0.8551811059224338 0.9248440349645846 1.0875938152234783 1.0 12.56840300471671 -6.028340466695769 11.851587306661578 0.929108656216639 1.0825335195231236 0.4676916900886757 0.07639420594073182 0.7769405643154558 325.2613631690941 0.010065904667594548 0.02711202408729708 9.368272899027721e-07 6.028340466695769 0.15342486330648464 S(ph)RTPPSAPSQSR ddPTM_A549_PD325901_60min_R1 3 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.5)RT(0.5)PPSAPSQSR;S(0.5)RT(0.5)PPSAPSQSR;S(0.5)RT(0.5)PPSAPSQSR 126.31 5.2997e-07 1048831000.0 4211.69 5002.61 4658.599999999999 4956.870000000001 5869.83 4933.24 5166.71 4848.63 5101.73 5054.86 6202.74 True False 4639.257668317692 5424.197501361323 4974.7606104375445 5263.044602031442 5457.553390614178 4893.065329050507 5363.331976382195 4751.920270973348 4887.322029843974 4735.695276932197 5439.842302408486 0.8528294407107472 0.9971240340845475 0.9145045635302651 0.9674994805825958 1.003255809124807 0.8994866132211418 0.9859351941153852 0.8735400783345206 0.8984308290849011 0.8705574562033667 1.0 12.409349113926142 -8.851456043935077 0.005417339174649507 1.8911285927272097 1.1156554138406615e-05 0.0 0.05794735317653968 7814.711116186404 32.209350654694596 5637.547988198607 5604.3100803211955 1.4078097092043067e-09 8.851456043935077 -1.8911174361730714 S(ph)RTPPTS(ph)R ddPTM_A549_PD325901_60min_R1 1 SRTPPTSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.706)RT(0.509)PPT(0.023)S(0.761)R 48.568000000000005 0.010243 251720000.0 763.85 535.77 700.57 885.72 693.93 652.07 474.42 883.13 680.84 725.07 956.28 True False 841.3954896833501 580.9212181849784 748.1148930696411 940.4289127839313 645.1907507285385 646.7597581131196 492.4743127125851 865.5152793479178 652.226662484877 679.28895645878 838.6636223583749 1.0032574052959313 0.6926748730932092 0.8920321248296127 1.1213422017034504 0.7693081391967634 0.7711789815020119 0.5872131562445935 1.0320171953017758 0.7776975715851064 0.8099659247751521 1.0 9.71194846925458 -10.954525512199346 1.14646142441375 1.002363654812342 0.8407901305051939 0.0 0.15897048961888674 0.8385440056686201 1.9105662152062544 0.11017133384275361 0.024095080813753077 1.1103873048148759e-11 10.954525512199346 -0.1615735243071481 S(ph)RTPPVTR ddPTM_A549_MK2206_60min_R1 2 SRTPPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.593)RT(0.407)PPVTR;S(0.669)RT(0.331)PPVTR 68.786 0.0020563 36863000.0 2079.46 2045.3400000000001 1760.45 1343.46 4070.8 3123.8 2167.98 2423.96 4037.1 2876.4 2532.0299999999997 True False 2430.422010084148 2149.439069646515 2010.1082816882583 1672.6077603102106 3471.9907125561526 3454.3584425893823 2561.8739032123353 2767.563753066168 3122.7032959239637 2226.6192422534405 1903.2570705270614 1.2769804183157984 1.1293477391634117 1.056141239570757 0.8788133700966743 1.8242363400728983 1.8149720792224777 1.3460472276101336 1.4541197802038153 1.6407154578751708 1.1698993671080027 1.0 10.894254722430961 -6.7294583439401645 24.99998767777738 1.3935800078172174 1.0863813708132128 0.31550906876976736 0.2553337799194734 277.6934141677762 217075.24589155283 0.045565616420365974 0.09484631294891484 1.8644109976821662e-07 6.7294583439401645 -0.3071986370040045 S(ph)RTPPVTR ddPTM_A549_PD325901_60min_R1 2 SRTPPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.85)RT(0.15)PPVTR;S(0.85)RT(0.15)PPVTR 61.833 0.0029689 40489000.0 3188.1000000000004 2851.3999999999996 3091.5 3034.9 3111.7 2685.0 2939.9 3077.2 3570.3 3357.1000000000004 3422.7 True False 3511.7535650448244 3091.697484989169 3301.307780699708 3222.358880242011 2893.144926782231 2663.1342502089115 3051.7795032750078 3015.8228319833015 3420.2527070526967 3145.132133073729 3001.729598282939 1.1699100302217864 1.0299720157197683 1.0998018550998514 1.0735007184142358 0.963825965016029 0.8871999169186617 1.01667368873622 1.0046950377237256 1.1394273185063581 1.0477733020565276 1.0 11.551578306661815 -2.721461620983794 1.334679501364115 1.0421164905386493 138.80111053764227 0.2438681176294838 0.0664091994672317 2314.019838462706 4.835354436500955 0.011824901682732621 975445.9138855265 0.0018990586563050066 2.721461620983794 137.7589940471036 S(ph)RTPSAS(ph)NDDQQE ddPTM_A549_PD325901_60min_R1 1 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 S(0.671)RT(0.329)PS(0.205)AS(0.795)NDDQQE 63.29 0.020801 34698000.0 320.19 362.52 430.84 388.35 438.62 337.18 493.03 483.03 604.02 689.11 665.23 True False 352.6954530885802 393.0708326640507 460.07939325138716 412.3374974931581 407.81284435685416 334.43411787167264 511.7925264463681 473.3955877202952 578.6351399361314 645.5994769957514 583.4109272404124 0.6045403618969948 0.6737460926954386 0.7886026328433805 0.7067702681599615 0.6990147515505865 0.5732393794089132 0.8772419276875631 0.8114273586878121 0.9918140249328703 1.10659476340201 1.0 9.188368597827608 -8.356345820556761 1.3181143881262467 0.9990085005228452 0.6853106931608082 0.7805763848732106 0.07753527425924753 0.12367200372213463 0.41664345180885337 0.012637375637417837 0.01586495669902698 4.4020419755813815e-09 8.356345820556761 -0.313697807362037 S(ph)RTPSASNDDQQE ddPTM_A549_PD325901_60min_R1 2 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.697)RT(0.103)PS(0.135)AS(0.065)NDDQQE;S(0.387)RT(0.286)PS(0.309)AS(0.017)NDDQQE 51.875 0.020978 4258400.0 218.62 231.91 314.88 401.16999999999996 194.32 132.25 442.61 284.65 594.23 776.05 848.73 True False 240.81414146046222 251.45386958821575 336.24965032726 425.9493597768252 180.67163356760713 131.1729998473478 459.45376575548545 278.97243244639475 569.2565795904891 727.0500705584785 744.3415905427526 0.3235263815970131 0.3378205286162537 0.4517410481954614 0.5722498449485204 0.2427267747269994 0.1762268849597672 0.6172619823923381 0.3747908702011076 0.7647786806799328 0.9767693755071976 1.0 9.539821039448391 -8.972538979367608 0.9409015422393862 0.9440775198115433 0.3666074319181848 0.7674263963669126 0.13025680195339556 0.15789256922793646 0.2882844604421239 0.03221538937059048 0.03027135045627558 1.0652732475758337e-09 8.972538979367608 -0.5774700878933585 down S(ph)RTPSNDGK ddPTM_A549_MK2206_60min_R1 2 SRTPSNDGK 9 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.5)RT(0.5)PSNDGK;S(0.5)RT(0.5)PSNDGK 84.479 0.00037642 27371000.0 6466.5 5620.3 4574.7 3111.5 3024.1 2334.3 1869.8500000000001 2279.8 2721.4 8555.2 7827.5 True False 7557.887109253914 5906.3492637577665 5223.461249248358 3873.8176396805447 2579.258896001048 2581.3140766170663 2209.577541269561 2602.9686315946847 2105.007245182799 6622.574378155553 5883.715721990089 1.2845432149290785 1.0038468108992904 0.8877827373144384 0.6583964662334633 0.43837245337350317 0.43872175315498946 0.3755411793624524 0.4424021748478128 0.3577683465085577 1.1255768788087461 1.0 12.522511827586777 -5.7566749721035935 1.4418879108429166 0.610345835146839 1.2831662315178547 0.4474554738916888 0.24125168711713751 0.46038128985943944 1.496824622076548 0.039900584950445434 0.34164590199847067 1.7511567717414565e-06 5.7566749721035935 0.6728203963710156 S(ph)RTPSNDGK ddPTM_A549_PD325901_60min_R1 1 SRTPSNDGK 9 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.499)RT(0.499)PS(0.002)NDGK 65.179 0.0016558 30732000.0 5250.5 6123.8 4550.3 4110.2 4431.2 3873.3 3025.8 3856.2 4046.5 5558.7 6840.5 True False 5783.526894786193 6639.8741174779725 4859.1107211767385 4364.07771905852 4119.967798810113 3841.757128988524 3140.9484747812935 3779.285065869623 3876.4396770828002 5207.722733346321 5999.161865502225 0.9640558172040621 1.1068002941644433 0.8099649301211101 0.7274479030402321 0.6867572322896819 0.6403823092489451 0.5235645487152306 0.6299688440817286 0.6461635415063569 0.8680750494986605 1.0 12.550545242558993 -5.855531227421948 5.50457150920765 0.7634892676539388 1.0336712992951462 0.43476762668074553 0.13116471052314715 0.19862493600521114 9.216864493410242 0.02455479681295472 0.079850075440588 1.3946613725873985e-06 5.855531227421948 0.27018203164120747 S(ph)RTPVQDHR ddPTM_A549_MK2206_60min_R1 3 SRTPVQDHR 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR 104.59 0.0001682 1273062000.0 3044.81 3597.84 3379.48 2722.82 4683.92 2831.18 3159.94 3146.8900000000003 4416.82 5446.5 5688.5599999999995 True False 3558.6994895426305 3780.954688382869 3858.7410808599147 3389.9110222320346 3994.9215727513038 3130.7735884148137 3734.060195074119 3592.9712944464413 3416.4173222122004 4216.131867241469 4275.933555730942 0.8322625791911527 0.8842407486232653 0.9024324233682552 0.7927885169517214 0.9342805543357885 0.7321848077406874 0.8732736714464232 0.8402776253692854 0.7989874673410791 0.9860143550618736 1.0 12.062023719675064 -10.850845719417013 1.0418287511286497 1.0020648645505488 0.8420823073695627 0.5353801585776509 0.053615527769396924 0.31385744565103635 0.591893900176158 0.0375327682209886 0.008692373860836771 1.4097895289876416e-11 10.850845719417013 -0.15998255718098608 S(ph)RTPVQDHR ddPTM_A549_PD325901_60min_R1 5 SRTPVQDHR 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR 75.736 0.00057129 137429500.0 4319.07 4312.41 4695.920000000001 4048.56 5000.46 5059.6900000000005 4186.93 4834.42 4581.280000000001 4957.08 5325.16 True False 4757.538806868714 4675.831925104211 5014.613370060936 4298.6303562531175 4649.2449402505 5018.485562174871 4346.26591232601 4737.993700570878 4388.74473343035 4644.089122819437 4670.199078970518 1.0187014999620636 1.0012061254859685 1.0737472397357288 0.92043835467517 0.995513223662269 1.0745763675841262 0.9306382530665236 1.014516430767509 0.9397339726249505 0.9944092412958043 1.0 12.189268334408993 -7.78381534151718 24.998480716348286 0.9719361912653075 1.0110661077377878 0.14635104875468252 0.045147723849908165 347.6649430985367 388410.5427716335 0.007020110595984069 0.009703686662017558 1.6450710453651434e-08 7.78381534151718 0.03912991647248032 S(ph)RTS(ph)PAPWK ddPTM_A549_MK2206_60min_R1 1 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.858)RT(0.234)S(0.908)PAPWK 49.732 0.0086184 22257000.0 4357.4 2525.5 1477.6 1370.0 5607.6 3669.7 3093.7 3946.5 4911.8 4242.2 4601.0 True False 5092.822591798191 2654.037162717333 1687.1458985046831 1705.6500615016369 4782.729468342802 4058.0252182502886 3655.7852444985647 4505.928460649365 3799.2851425328413 3283.8840736641437 3458.4447188599675 1.4725759715127023 0.7674077160302862 0.48783370435391243 0.49318413337654354 1.3829133778721692 1.173367090738974 1.0570604828703603 1.302877110071225 1.0985530929016056 0.9495262583658225 1.0 11.75590768066399 -6.761549545228756 24.999999999765805 1.0972291149134716 0.7798747535025017 0.24814389502958112 0.2713700558118931 3.322539019444452 754238.7517540954 0.03822862910299219 0.07566923762397255 1.7316114735992294e-07 6.761549545228756 -0.31735436141096995 S(ph)RTS(ph)PAPWK ddPTM_A549_PD325901_60min_R1 1 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.607)RT(0.528)S(0.865)PAPWK 48.229 0.009533799999999999 26945000.0 8506.1 7938.8 8747.1 7762.1 8364.6 7668.3 6408.5 7163.3 9287.9 10057.0 11005.0 True False 9369.633010140144 8607.830537221022 9340.730806585292 8241.547287991863 7777.099352303457 7605.851907216758 6652.378974365755 7020.422361999865 8897.56186254229 9421.999303661636 9651.454766442797 0.9708000748982919 0.8918687125954982 0.9678054793420507 0.8539176204448422 0.805795555230047 0.788052380835021 0.689261788543573 0.727395250963535 0.9218881586098583 0.9762258158657121 1.0 13.236530701255194 -9.041318179048869 3.631181457767189 0.9687303887820438 0.835545152753574 0.3232253147082298 0.0841633646051112 0.2025350296857224 5.604910702714102 0.01742181345121375 0.017427111121280175 9.092468830667509e-10 9.041318179048869 -0.13318523602846977 S(ph)RTS(ph)PVTR ddPTM_A549_MK2206_60min_R1 1 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.912)RT(0.212)S(0.869)PVT(0.007)R 47.153999999999996 0.011101999999999999 26467000.0 1796.1 1329.7 778.78 943.63 1985.2 969.85 698.75 1358.1 1830.1 2008.2 2252.2 True False 2099.237769571014 1397.3760503920957 889.2227144270967 1174.8193923611605 1693.1797097785386 1072.478883265673 825.7038302334981 1550.6148340068157 1415.5852720691692 1554.5462252445268 1692.9165824421702 1.2400125271043727 0.8254252246594849 0.5252607976373652 0.6939617725679004 1.0001554284121836 0.6335095859942105 0.4877404113097841 0.9159428468530489 0.8361813492470326 0.9182651061294272 1.0 10.725295171621601 -9.833629326118915 0.7831378231573206 0.982709914390673 0.775519755137417 0.08396860281110896 0.2056917054499566 0.8693589865829808 1.1075853791442427 0.08472363229744734 0.04339767015747141 1.4667992319469424e-10 9.833629326118915 -0.207190159253256 S(ph)RTSPAPWK ddPTM_A549_MK2206_60min_R1 2 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.372)RT(0.372)S(0.256)PAPWK;S(0.333)RT(0.333)S(0.333)PAPWK 51.841 0.0070266999999999994 65811000.0 7342.2 6078.4 4663.4 4104.3 9490.2 6680.1 5719.799999999999 6490.5 9461.0 8493.0 8758.9 True False 8581.383860444457 6387.764597054458 5324.740243020262 5109.853684249027 8094.20415159192 7386.983748108498 6759.0136217095705 7410.548251322611 7318.098606112464 6574.425401355329 6583.8233966578055 1.3034043204744357 0.9702211332547477 0.8087610985621666 0.776122531907976 1.2294078476802461 1.1219899597942447 1.0266091926373204 1.1255691115719297 1.1115271727712812 0.9985725626681835 1.0 12.684709922337921 -6.767721714350887 24.99998699510786 1.0729304797586472 0.9538935378034534 0.1429072350025592 0.1411757669908958 232.89176963318855 926775.2930447134 0.020372674399417826 0.03918557799061325 1.707175956641429e-07 6.767721714350887 -0.11903694195519376 S(ph)RTSPAPWKR ddPTM_A549_MK2206_60min_R1 1 SRTSPAPWKR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.363)RT(0.363)S(0.274)PAPWKR 42.629 0.015609999999999999 10243000.0 1448.6 1143.5 688.46 775.28 1857.9 1378.8 1041.2 977.28 2044.9 2498.6 2204.3 True False 1693.088265130322 1201.6992657165983 786.0939802954344 965.2236348036413 1584.6053711452475 1524.7037008266338 1230.3725624889 1115.812432794478 1581.7334150342854 1934.1645246469361 1656.911474414916 1.0218338705923806 0.7252646168926672 0.474433301014478 0.5825438773936178 0.9563609134306943 0.9202083058571568 0.7425698846846153 0.6734291179850092 0.9546275944481721 1.16733123918399 1.0 10.694280808866397 -8.843790600028022 6.528574943734221 0.9798171599820583 0.7566334373475386 0.35234858061589525 0.16262861899277659 0.2011181123116896 12.974727095341404 0.027853526405771063 0.029589943939977187 1.4328786112908533e-09 8.843790600028022 -0.2231837226345197 S(ph)RTSPITR ddPTM_A549_MK2206_60min_R1 3 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.752)RT(0.111)S(0.136)PIT(0.001)R;S(0.683)RT(0.193)S(0.124)PITR;S(0.493)RT(0.24)S(0.24)PIT(0.028)R 68.132 0.0021421 437709000.0 6351.6 6784.8 5792.1 4084.76 7248.700000000001 5202.33 5194.389999999999 5754.360000000001 7201.299999999999 7522.3 8619.1 True False 7423.594798289208 7130.117339776112 6613.506875154964 5085.5263833718445 6182.425832294826 5752.837107572829 6138.143425726774 6570.05815198841 5570.217048113063 5823.007205535759 6478.739594941523 1.145839354939564 1.1005408128061163 1.0208014658157685 0.7849561336502129 0.9542636714588663 0.8879562179138262 0.9474286372798992 1.014095111511842 0.8597686272901265 0.898787043406136 1.0 12.661497456260552 -5.903201226957006 3.493801944721603 0.9287192462909633 1.1247682317256205 0.6131585819360064 0.06277532218181547 0.12930089513249526 3.06007620134119 0.009560118371969342 0.03410168754975139 1.2496798666445238e-06 5.903201226957006 0.1960489854346572 S(ph)RTSPITR ddPTM_A549_PD325901_60min_R1 1 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.45)RT(0.09)S(0.45)PIT(0.009)R 49.777 0.009111399999999999 261730000.0 2052.1 2624.8 2301.6 2147.4 2793.4 2642.8 2533.6 2619.0 2334.9 3123.5 2716.3 True False 2260.427681323823 2846.0011077364 2457.8004166451415 2280.040020900752 2597.2012207068456 2621.2779130175463 2630.0175344391187 2566.7619904342473 2236.772272833471 2926.2816769401566 2382.212320044395 0.94887750445422 1.1946882667802516 1.031730209757012 0.9571103304756066 1.0902475815667196 1.100354444044138 1.1040231436592125 1.0774698664921745 0.9389474875991686 1.228388272664807 1.0 11.218086287043082 -8.753591844356544 24.990291466309507 0.9711696461600661 1.066388608981202 0.0 0.10211650039148412 156.23909385940428 497539.22497818136 0.011053472286499519 0.012422385242258558 1.763632752957679e-09 8.753591844356544 0.09521896282113596 S(ph)RTSPVSR ddPTM_A549_PD325901_60min_R1 1 SRTSPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.351)RT(0.109)S(0.322)PVS(0.217)R 60.717 0.0092806 41477000.0 2062.5 2124.0 2272.0 1668.2 2696.7 1798.3 1861.1 2085.5 1940.1 2269.1 2111.8 True False 2271.8834816677504 2302.996934178647 2426.1915826458794 1771.240925242915 2507.2930951099547 1783.655241024465 1931.9251789329965 2043.9030664568986 1858.5643438794864 2125.82863875297 1852.0619878031703 1.226677884773475 1.24347724284885 1.3099948050463013 0.9563615780181735 1.3537846527933923 0.9630645479313324 1.0431212300969235 1.103582428621237 1.0035108738903653 1.1478172181885387 1.0 10.854916670517055 -6.874870490888215 0.5237017184194078 0.9989750900509351 1.2817935226601855 0.26389810066545827 0.11673014370172571 0.8027470173693276 0.35455837805280455 0.021881271873227144 0.10419741294875216 1.3339191552211181e-07 6.874870490888215 0.28281843260925044 S(ph)RTSPVTR ddPTM_A549_MK2206_60min_R1 2 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.772)RT(0.111)S(0.111)PVT(0.006)R;S(0.515)RT(0.414)S(0.07)PVTR 49.418 0.009979700000000001 250904000.0 3243.3 3665.2 3274.1 2496.8 3558.0 2798.6000000000004 3113.8999999999996 2757.5 4286.4 3914.3999999999996 4644.8 True False 3790.689748928049 3851.7430246650465 3738.4166122727283 3108.51611208561 3034.6229132540993 3094.7459944396696 3679.6553230255304 3148.3840694895753 3315.5372439742596 3030.1343213311306 3491.367970041465 1.085731948466901 1.1032188694276477 1.0707598409423253 0.8903433092011473 0.8691787686927938 0.8863992626944204 1.0539293923183437 0.9017623168067798 0.949638443276113 0.8678931431266877 1.0 11.769576701300045 -6.127479672265152 6.023619865998054 0.9574434374767049 1.0924841613587204 0.5479538049147208 0.060213663835979744 0.1440855977796106 6.4455743723571555 0.008110062374492553 0.0218868651905556 7.456247711770062e-07 6.127479672265152 0.1350407238820155 S(ph)RTSPVTR ddPTM_A549_PD325901_60min_R1 2 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.609)RT(0.09)S(0.299)PVT(0.002)R;S(0.731)RT(0.134)S(0.134)PVT(0.001)R 49.16 0.028212 283331000.0 2097.15 2077.55 1986.99 1834.6399999999999 2256.0 2153.3 1975.2800000000002 2327.3999999999996 2394.7 2504.5 2287.8999999999996 True False 2310.0511241597665 2252.6324296623598 2121.839090141522 1947.9615460302487 2097.54634277749 2135.764238724339 2050.4503613146917 2280.9781811900198 2294.0590867935716 2346.3654425793547 2006.502804193045 1.151282280459508 1.1226659763220719 1.0574812483229306 0.970824233068371 1.045374239395125 1.0644212578528038 1.0219025645166346 1.1367929197125446 1.1433121757914377 1.1693805947722022 1.0 10.97046745702349 S(ph)RTSVQTEDDQLIAGQSAR ddPTM_A549_MK2206_60min_R1 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.333)RT(0.333)S(0.333)VQTEDDQLIAGQSAR 117.82 1.4387e-14 18557000.0 2064.9 2136.1 1579.4 1475.9 2105.9 1479.1 1604.1 1654.8 2834.6 2400.7 2595.6 True False 2413.4046380419736 2244.8183659792107 1803.3826692598122 1837.4955662556692 1796.1248996688619 1635.6173802528824 1895.5442061932802 1889.3729676124572 2192.5676259260536 1858.3802026414373 1951.0408850843155 1.236983118340791 1.1505747435334752 0.9243182359973342 0.9418026963470121 0.920598288534195 0.8383306535281541 0.9715553480630228 0.9683922987245891 1.123793787556277 0.9525070524399217 1.0 10.930028295356518 -5.580917052861569 5.340932638227874 1.009596695829285 1.2181098693051833 0.5044635351381714 0.07933124088446888 0.1411324587123278 8.064662752788742 0.013678749204856452 0.05735194557769619 2.624719798215042e-06 5.580917052861569 0.20851317347589826 S(ph)RTSVQTEDDQLIAGQSAR ddPTM_A549_PD325901_60min_R1 2 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.475)RT(0.315)S(0.21)VQTEDDQLIAGQSAR;S(0.333)RT(0.333)S(0.333)VQT(0.001)EDDQLIAGQSAR 149.2 1.6746e-21 126937000.0 6019.3 5447.9 6619.4 6387.200000000001 7794.1 7131.200000000001 6616.9 7631.799999999999 6939.299999999999 6524.8 6451.6 True False 6630.374904825547 5907.01365240671 7068.632289685803 6781.722837616321 7246.669304185301 7073.125871541826 6868.709750406616 7479.577761968718 6647.665353065786 6112.823014470667 5658.094100062003 1.1718389244803986 1.0439935335013215 1.2492956399591062 1.198587849138459 1.2807615384314464 1.250089826442497 1.2139617385174535 1.3219253037673506 1.1748948030031772 1.0803678599837496 1.0 12.466100455133244 -10.141271803775307 0.84466755853087 1.0115784336429667 1.212981978836449 0.45025771040703644 0.07154546877429131 0.32022490176959295 0.4518453095447872 0.034175408045797044 0.014384497733638398 7.223175986869141e-11 10.141271803775307 0.20140354519348236 S(ph)RVSVS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.766)RVS(0.241)VS(0.993)PGR;S(0.825)RVS(0.21)VS(0.965)PGR 56.951 0.0044585 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)RVSVS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.584)RVS(0.436)VS(0.98)PGR 59.11600000000001 0.0029019000000000002 147700000.0 1300.7 1148.6 932.71 1092.5 1466.4 894.7 1400.2 1341.5 1250.9 1415.3 1513.8 True False 1432.7461064752683 1245.39655301205 996.009309440863 1159.9812437524783 1363.4051228053677 887.4138598368401 1453.485377218839 1314.7427301136092 1198.3290231219273 1325.9377164633906 1327.6121967688418 1.0791902258523254 0.9380725456146838 0.7502260915235354 0.8737350007597507 1.0269603775286482 0.6684285230255027 1.0948117083861904 0.9903063057973146 0.9026197755929288 0.9987387278381996 1.0 10.374618073286369 S(ph)RVSVSPGR ddPTM_A549_MK2206_60min_R1 1 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.587)RVS(0.092)VS(0.321)PGR 66.56 0.0020974 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)RVSVSPGR ddPTM_A549_PD325901_60min_R1 1 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.749)RVS(0.251)VSPGR 101.95 0.00019862 34538000.0 1957.8 2524.1 2229.9 2401.2 2289.6 2164.2 2093.1 1849.0 2184.0 2012.5 2286.5 True False 2156.554414743814 2736.8147653297215 2381.2344234780135 2549.516670479132 2128.7863946911966 2146.575472738224 2172.7540658882685 1812.1202444875605 2092.2140750645844 1885.4304065446006 2005.274995317716 1.0754407349512325 1.3648077055367163 1.187485222245406 1.271405007508801 1.0615932476402876 1.0704643890491041 1.0835192534498328 0.9036766771235024 1.0433551906595702 0.9402353347780477 1.0 10.969584380283239 -6.8632751002588135 4.339412268522268 1.0211332138216498 1.2320116801221621 0.6046388191523843 0.08193464860859474 0.10136355348728675 3.4096033622384345 0.010399828016719228 0.020310844997825477 1.3700136673869992e-07 6.8632751002588135 0.21087846630051232 S(ph)S(ph)DGSLSHEEDLAK ddPTM_A549_MK2206_60min_R1 1 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 2 S(0.5)S(0.5)DGS(0.5)LS(0.5)HEEDLAK 41.644 0.031866000000000005 1629000.0 229.01 354.67 307.51 357.58 308.75 229.04 318.76 287.66 450.68 421.0 383.26 True False 267.66128924305883 372.721188081947 351.1195419932153 445.1871160523763 263.3332839986518 253.27686077555265 376.6745659037279 328.436685921803 348.6016995880734 325.8958076028013 288.0859645621108 0.929102150637233 1.2937846126883734 1.2188012787326006 1.545327335641146 0.9140788389289184 0.8791711222743259 1.3075075228891186 1.1400648636979767 1.2100613791371135 1.1312450021581624 1.0 8.17035556443464 -10.845732613362262 0.987551464326234 0.9956371731785361 1.1679667257946182 0.01682096173000247 0.1914930107688844 1.1634570771182182 1.9292245491560116 0.14642880813762646 0.03234333611128212 1.4264855826310563e-11 10.845732613362262 0.17232955261608218 S(ph)S(ph)SPVTELASR ddPTM_A549_PD325901_60min_R1 1 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.998)S(0.679)S(0.3)PVT(0.023)ELASR 111.52 7.3252e-05 5026000.0 552.45 628.63 398.99 719.32 805.31 654.1 387.34 747.87 497.49 795.44 818.2 True False 608.5343173078054 681.6068562771769 426.0678607217781 763.7507627057512 748.747803768679 648.7732264661641 402.0804356605807 732.9531461573345 476.58222536807705 745.2157826493601 717.5665869971372 0.8480527498561373 0.9498865591408819 0.5937676982770074 1.0643622160584216 1.0434541091190277 0.9041296490422464 0.5603388493090257 1.0214426917850046 0.664164460837665 1.0385318884034567 1.0 9.486968903476958 -7.602815630415107 19.102042301590924 0.8301401937829924 0.9030121405458099 0.004443950761438109 0.17985722762103082 15.237684222683233 3634.622238094446 0.02824276372701327 0.04189078267390037 2.495653973728228e-08 7.602815630415107 0.0728719467628175 S(ph)SADDEIEETR ddPTM_A549_MK2206_60min_R1 2 SSADDEIEETR 11 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 S(0.897)S(0.103)ADDEIEETR;S(0.5)S(0.5)ADDEIEETR 57.019 0.014049 1575750.0 0.0 152.43 158.42 116.37 291.9 424.06 251.24 97.477 536.88 114.67 291.90999999999997 True False 0.0 160.1880359188292 180.88633814368706 144.8806552240478 248.9618966775917 468.93374773175407 296.88705589676425 111.29466326079257 415.277537221188 88.76596735822626 219.42069069385215 0.0 0.7300498207907493 0.8243814089349926 0.6602871167979016 1.1346327271613463 2.137144615892383 1.3530495002907335 0.5072204581475729 1.892608832412282 0.4045469325501187 1.0 7.777555763619615 -5.898794067516508 0.7816387061200524 1.3924387790786774 4.384187089969972e-09 0.2325678073852283 0.530744767499373 0.9952086578115112 0.7197465334606029 0.08032039024092352 0.9923204747643688 1.262426006149175e-06 5.898794067516508 -1.3924387746944904 S(ph)SADDEIEETR ddPTM_A549_PD325901_60min_R1 2 SSADDEIEETR 11 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 S(0.977)S(0.023)ADDEIEETR;S(0.877)S(0.123)ADDEIEETR 99.5 0.00027317 1971690.0 204.47 92.822 229.08 298.09 296.64 294.78200000000004 258.6 308.09000000000003 337.181 355.95 478.03 True False 225.22764387714162 100.64443569883737 244.6267463699465 316.50234228849075 275.8050297524443 292.3813931266605 268.44116451134965 301.94490325807067 323.0104551485127 333.475256253193 419.23534048183996 0.5372343934990801 0.2400666784989158 0.5835069774623235 0.7549514836338105 0.6578763837882874 0.697415901986263 0.6403113921713328 0.7202276957639978 0.7704752532963154 0.7954368920089602 1.0 8.711616527329612 -6.8749146757621435 0.12177744300697618 1.2156073084669614 3.862233584812418e-14 0.5834592227409567 0.11612808675214194 6.36468709719022 0.23142792334868847 0.6768137058905899 1.6630008724532348 1.3337834499472796e-07 6.8749146757621435 -1.2156073084669228 S(ph)SAEAQTPEDTPNK ddPTM_A549_MK2206_60min_R1 2 SSAEAQTPEDTPNK 14 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 S(0.5)S(0.5)AEAQTPEDTPNK;S(0.5)S(0.5)AEAQTPEDTPNK 115.8 3.8448e-06 2862700.0 1041.23 1328.55 1292.2 1345.54 1940.56 1230.21 1414.83 1538.12 1869.35 1603.75 1730.1100000000001 True False 1216.964168370595 1396.1675203041427 1475.4533906657769 1675.1973604035857 1655.1061946442876 1360.3900056526936 1671.8862971438434 1756.1532202949438 1445.9452097385406 1241.461761147252 1300.4759383931364 0.9357836869125558 1.0735819703279113 1.1345487810323058 1.2881417571427378 1.2726926702614207 1.0460708772002247 1.2855957175260162 1.35039270504677 1.111858487382047 0.9546210925526218 1.0 10.344823991223242 -9.607187207275496 1.3839197334914082 1.026111947064436 1.1739112553648552 0.24995799862374768 0.12081267605474091 0.4256381367849155 1.6586962953339446 0.031141865830874936 0.023345242881138095 2.4706589115274484e-10 9.607187207275496 0.1477993083004192 S(ph)SASAPDVDDPEAFPALA ddPTM_A549_MK2206_60min_R1 2 SSASAPDVDDPEAFPALA 18 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(0.333)S(0.333)AS(0.333)APDVDDPEAFPALA;S(0.333)S(0.333)AS(0.333)APDVDDPEAFPALA 66.797 0.0019552 3256300.0 498.28 1068.97 681.79 828.8699999999999 1359.72 1104.27 1384.85 925.71 1586.1 1332.0900000000001 1440.83 True False 582.3774822236202 1123.3760070599678 778.478073999396 1031.9431872093878 1159.7069892101931 1221.1231184448993 1636.459319211249 1056.9322273679766 1226.8508824812357 1031.169943823316 1083.032146114977 0.5377287131436574 1.0372508434673073 0.718794983871837 0.9528278462565917 1.070796461000961 1.1275040383845285 1.5109979192044398 0.9759010673500087 1.1327926755287563 0.9521138846361121 1.0 10.080860349725024 -6.548627336023579 2.5799200125737114 1.0980230515450806 0.7902662872729231 0.4153916721516223 0.17846037598153838 0.225832456971016 3.017046461395635 0.02465489649569182 0.05999990513250025 2.8273050179376957e-07 6.548627336023579 -0.3077567642721575 S(ph)SASGYGSR ddPTM_A549_MK2206_60min_R1 2 SSASGYGSR 9 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 S(0.87)S(0.13)ASGYGSR;S(0.909)S(0.089)AS(0.002)GYGSR 150.15 2.3134000000000002e-05 32149000.0 3050.8 3524.9 3183.9 2759.0 3883.7000000000003 2853.8 2913.8 3241.8999999999996 4541.8 5248.0 5137.0 True False 3565.7004551011933 3704.302353934798 3635.424895945496 3434.9551238562176 3312.4128747062823 3155.7872218008765 3443.1997431618865 3701.4492529023596 3513.0895517642525 4062.4731551057066 3861.3411260125326 0.9234357542461842 0.9593305105783536 0.9414928071117269 0.889575671187428 0.8578400008203604 0.8172774999187249 0.8917108410770106 0.9585916219540832 0.9098107204509261 1.0520886455066651 1.0 11.914886297907705 -10.468052595162016 0.6081441992255248 1.0070880064716636 0.902182394871382 0.5166132128156732 0.043471659022135255 0.7931548277085478 0.4796057229600594 0.04353999330148508 0.00982702402843163 3.403669671191843e-11 10.468052595162016 -0.10490561160028167 S(ph)SATLWNSPSR ddPTM_A549_MK2206_60min_R1 2 SSATLWNSPSR 11 0 Q3KQU3-4;Q3KQU3;C9JIR3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.987)S(0.013)ATLWNSPSR;S(0.965)S(0.033)AT(0.002)LWNSPSR 139.78 7.2199999999999995e-09 10683300.0 4111.1 5187.700000000001 4265.6 4079.2999999999997 6241.3 5236.5 4470.5 5614.1 6808.9 7453.3 7421.3 True False 4804.953173255051 5451.731771541763 4870.526221346494 5078.7286831267365 5323.213037800113 5790.6229542926185 5282.731982910701 6409.915867460178 5266.695021579024 5769.594353458336 5578.386392539768 0.861351802320638 0.9772954736216577 0.8731066438603234 0.9104297059663621 0.9542567802257459 1.0380462282133565 0.9470000124006362 1.1490627246675584 0.944125173656385 1.0342765716577609 1.0 12.445632152211257 -6.921513222964331 3.8403381327352952 0.9896753656136311 0.9086062823256681 0.38089593920491105 0.06183403267730097 0.2316784932734441 6.7373220936480624 0.00875034972481502 0.017032690561469617 1.1980826446117623e-07 6.921513222964331 -0.08106908328796303 S(ph)SAVDPEPQVK ddPTM_A549_MK2206_60min_R1 1 SSAVDPEPQVK 11 0 Q5SSJ5;Q5SSJ5-2;Q5SWC8;Q5SSJ5-3;B0QZK4 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 S(0.5)S(0.5)AVDPEPQVK 109.39 0.00010283 4517900.0 2631.0 2891.2 2774.1 2471.1 2949.2 2389.1 2369.6 2407.3 3736.1 3744.9 3822.2 True False 3075.0484782257895 3038.3497306863424 3167.509093829074 3076.5196109318927 2515.3765867816164 2641.9129762437688 2800.1256474007837 2748.5421470470574 2889.8793153257357 2898.9244890539944 2873.042252646507 1.070310913594537 1.0575374336689833 1.102493042318232 1.0708229606083768 0.8755097786900188 0.9195524269822926 0.9746204201561754 0.9566661069864997 1.0058603602727105 1.0090086515030003 1.0 11.488363494809008 -6.569488698688425 24.99984584765892 0.9829944822726258 1.0768235159109618 0.6079687449539183 0.04145449718582058 77.8183561746374 41738.62210131883 0.0065810606600963314 0.013699573661183831 2.6947054536874246e-07 6.569488698688425 0.09382903363833606 S(ph)SAVSPR ddPTM_A549_MK2206_60min_R1 1 SSAVSPR 7 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 S(0.499)S(0.499)AVS(0.001)PR 52.403 0.047412 435560000.0 2867.1 3718.1 2704.9 2532.4 3449.8 2763.4 3023.8 3201.1 4473.4 4368.8 4827.4 True False 3350.9963861349884 3907.335408710878 3088.4954932764763 3152.838113683757 2942.3389899224253 3055.8211538035366 3573.185319298824 3654.8657279576037 3460.1820425518963 3381.8850457366257 3628.623350537842 0.9234897266585403 1.0768093106526817 0.8511479960626648 0.868879960554858 0.8108692211018005 0.8421433856866397 0.9847220210301517 1.0072320477725725 0.9535798313261202 0.9320022275762945 1.0 11.82520659815829 -7.785901402240278 24.696753245732364 0.9806257270816343 0.8967147854232527 0.25492545155682456 0.06778663978991885 214.46258656986086 216519.72196513708 0.010989725817399184 0.015188383135683783 1.6371881696295716e-08 7.785901402240278 -0.08391094165838164 S(ph)SAVSPR ddPTM_A549_PD325901_60min_R1 2 SSAVSPR 7 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 S(0.495)S(0.495)AVS(0.009)PR;S(0.5)S(0.5)AVS(0.001)PR 52.403 0.047412 1176000000.0 9484.5 9398.2 9722.599999999999 9536.7 11191.4 9668.8 9432.7 8688.4 10047.4 10229.0 11192.0 True False 10447.359457880126 10190.219296985768 10382.43410274333 10125.760299582842 10405.354672234042 9590.060498480425 9791.6665602715 8515.103046082058 9625.14271877468 9583.139194307943 9815.45495193347 1.0643785243823243 1.0381810468172417 1.0577639196131376 1.0316139546428509 1.0600990706176459 0.9770367797970845 0.9975764351445284 0.8675199558024291 0.980610961581429 0.9763316363058887 1.0 13.260839423641029 -7.265603774547643 24.245926175545232 0.9800519403716551 1.0490926939644294 0.5593911065104744 0.03598772918244062 169.38610909538036 986200.6522540528 0.005627445055852359 0.009197374768519131 5.4249560666354776e-08 7.265603774547643 0.06904075359277428 S(ph)SDEDAAGEPK ddPTM_A549_MK2206_60min_R1 2 SSDEDAAGEPK 11 0 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 S(0.989)S(0.011)DEDAAGEPK;S(0.992)S(0.008)DEDAAGEPK 289.89 4.061899999999999e-109 112958000.0 11428.699999999999 13087.4 11945.3 11640.900000000001 13793.9 10107.199999999999 8524.7 9859.1 13150.7 16082.7 15698.2 True False 13357.585155111767 13753.492759194942 13639.323160129932 14492.92102257986 11764.835582668837 11176.737195383625 10073.527644495885 11256.657617227454 10172.08744735262 12449.606900079756 11799.903691720829 1.1320079810891892 1.1655597468007142 1.1558842780809895 1.2282236703972875 0.9970281020957318 0.9471888489416709 0.8536957510563224 0.9539618213261747 0.8620483448936678 1.0550600433133008 1.0 13.526487464217603 -6.912002333725832 4.235938401782408 0.9301503121261485 1.1683343120080014 0.7630398005304431 0.05841949470537351 0.07312560136686899 2.455817779040109 0.008420111626612815 0.016316953661443607 1.2246096186822899e-07 6.912002333725832 0.2381839998818529 S(ph)SDEDAAGEPK ddPTM_A549_PD325901_60min_R1 2 SSDEDAAGEPK 11 0 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 S(0.993)S(0.007)DEDAAGEPK;S(0.993)S(0.007)DEDAAGEPK 217.09 2.7824e-31 138982000.0 7768.4 8218.8 9013.5 8829.7 10163.0 8310.6 9325.9 9118.1 9903.6 9648.7 10401.3 True False 8557.042249206179 8911.427119881111 9625.210312578625 9375.090515296344 9449.185940446645 8242.921228970647 9680.802227828293 8936.232342488927 9487.38613269671 9039.479435342555 9122.006039273192 0.9380658390671239 0.9769152839314652 1.0551637733124684 1.0277443881240094 1.0358670998204602 0.9036303191953831 1.0612580375576712 0.9796345566989927 1.0400547962641593 0.9909530202484702 1.0 13.155135410002087 S(ph)SDEENGPPSSPDLDR ddPTM_A549_PD325901_60min_R1 1 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(0.499)S(0.499)DEENGPPS(0.001)S(0.001)PDLDR 45.438 0.04077 171360000.0 530.57 773.07 781.76 750.06 867.73 635.51 453.93 676.27 791.17 778.65 803.55 True False 584.4330758150097 838.219321989401 834.8149347047727 796.3895026901455 806.7836383059895 630.3346172626686 471.20455455002735 662.7812643264484 757.9198762677871 729.4859061147594 704.7184441231354 0.829314289541841 1.1894386034303068 1.18460775600036 1.130081821089661 1.1448311663104709 0.8944488717717317 0.6686422903778771 0.9404908724237118 1.075493174030444 1.0351451876961182 1.0 9.460903163029707 -5.2164823739694635 22.00977743964203 1.0278063002348845 0.829311020961809 0.1317468728343245 0.14534437855737012 11310.485644346614 5536720.176627302 0.02089149826761589 11.372789334415382 6.074599163883429e-06 5.2164823739694635 -0.19849527927307553 S(ph)SDGGSEEPPDR ddPTM_A549_MK2206_60min_R1 1 SSDGGSEEPPDR 12 0 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 S(0.499)S(0.499)DGGS(0.002)EEPPDR 52.693000000000005 0.024294999999999997 1017800.0 411.25 309.16 228.53 199.97 369.82 252.16 179.72 110.48 218.0 116.98 354.41 True False 480.65894590283335 324.89492347087355 260.93899037985614 248.96265897699442 315.4199678975918 278.8434038297389 212.37279766663949 126.14087833081001 168.62334807446533 90.55413675386157 266.40021578160435 1.804273861012481 1.2195745507099114 0.9794999212529717 0.9345437587073679 1.1840079294686983 1.046708626010782 0.7971945407159253 0.47350141200418794 0.6329700131050315 0.3399176554274945 1.0 8.057451440753436 -2.000000000024082 0.5629626129060582 0.8169487240869608 47.78087071200334 0.6443964877355084 0.22694239946814618 59.44365727951919 0.4735627390832797 0.036995258588055226 3407.018468075597 0.00999999999944549 2.000000000024082 46.96392198791638 S(ph)SDGGSEEPPDRR ddPTM_A549_MK2206_60min_R1 2 SSDGGSEEPPDRR 13 1 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 S(0.49)S(0.49)DGGS(0.021)EEPPDRR;S(0.495)S(0.495)DGGS(0.01)EEPPDRR 171.26 4.466100000000001e-22 43387000.0 1372.68 1206.54 1397.38 1081.28 1437.49 1229.33 813.5 930.22 1605.6100000000001 1918.82 1771.01 True False 1604.3548251961142 1267.9477324509885 1595.5494962455844 1346.1936485405033 1226.037125231489 1359.4168846367886 961.3024198854393 1062.0815336792725 1241.941898632305 1485.357229321633 1331.2193396105613 1.205176921231821 0.9524709375255302 1.1985624372857677 1.0112485662462827 0.9209880661665848 1.0211817423224008 0.7221217355260641 0.7978260997845605 0.9329355889583353 1.115786997021966 1.0 10.378532582506718 -6.516683025512671 5.133748816997726 0.9375337425028302 1.1034916344298755 0.3287413659290551 0.1172414321359472 0.1643670001970219 13.004358989903931 0.015364688714843444 0.034410311897406634 3.04310525837086e-07 6.516683025512671 0.16595789192704535 S(ph)SDGGSEEPPDRR ddPTM_A549_PD325901_60min_R1 3 SSDGGSEEPPDRR 13 1 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 S(0.492)S(0.492)DGGS(0.016)EEPPDRR;S(0.497)S(0.497)DGGS(0.006)EEPPDRR;S(0.477)S(0.477)DGGS(0.045)EEPPDRR 115.09 7.9289e-06 21855300.0 1198.52 1029.0 1232.78 862.99 1056.077 881.1500000000001 1283.62 1565.31 2083.3599999999997 2757.71 2912.53 True False 1320.1928680962085 1115.7174412758145 1316.4438641083582 916.2949323075071 981.9017947878649 873.9742065443517 1332.4688615238156 1534.0886640880603 1995.803624279556 2583.5877199662673 2554.3072740488556 0.5168496686005826 0.43679844340234003 0.5153819501213145 0.35872541319395757 0.3844102096735776 0.34215703624372773 0.5216556657303438 0.6005889266628296 0.7813482913964339 1.0114631650682335 1.0 11.31871637120685 -8.848962868632983 0.8811430920771784 0.9449412590162142 0.42107295405771344 0.9154175525130405 0.06670459028234835 0.10268828555190536 0.16319377651968786 0.017812648821624383 0.017670752039707693 1.4159148328556398e-09 8.848962868632983 -0.5238683049585007 down S(ph)SDIVSSVR ddPTM_A549_MK2206_60min_R1 2 SSDIVSSVR 9 0 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.921)S(0.079)DIVSSVR;S(0.973)S(0.027)DIVSSVR 145.99 3.0938e-05 16053700.0 3191.8 3364.8 3386.1000000000004 2939.1 4183.6 3048.5 3059.2 3773.4 4220.0 4604.6 4181.1 True False 3730.4978079821603 3536.0539477771886 3866.299896404107 3659.179631941214 3568.1979819814096 3371.0902465694744 3615.0170410737996 4308.2910055528455 3264.1767379552466 3564.4176619664154 3142.817477510413 1.1869915560407533 1.1251222742270983 1.2302018567959605 1.16429912272215 1.135350050556535 1.0726331613886428 1.1502472119180909 1.3708371664541155 1.0386147974908706 1.1341472062800075 1.0 11.617842773172645 -8.9679920981997 24.99760066680054 1.0170358027357538 1.1748235655888917 0.28162814958160853 0.08024250902079051 106.02879100597211 82807.20270336403 0.012404079510902919 0.013104899289206684 1.0764847996270899e-09 8.9679920981997 0.1577877628531379 S(ph)SDIVSSVR ddPTM_A549_PD325901_60min_R1 2 SSDIVSSVR 9 0 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.954)S(0.046)DIVSSVR;S(0.98)S(0.017)DIVS(0.004)SVR 126.03 6.650699999999999e-05 27780000.0 8474.4 10193.2 9471.3 10183.2 11482.0 9066.8 9427.4 10457.7 10227.5 11379.099999999999 11973.5 True False 9334.714849476442 11052.216737038512 10114.079373553664 10812.193136274815 10675.543930749618 8992.962986887958 9786.164865871231 10249.112969593063 9797.673742089302 10660.621684030646 10500.835406270131 0.8889497347899207 1.0525083299981206 0.9631690224869602 1.0296507580548087 1.0166375833655261 0.8564045277310213 0.9319415539098761 0.9760283418472817 0.9330375501590126 1.0152165300738936 1.0 13.358216487301778 S(ph)SDKLNLVTK ddPTM_A549_MK2206_60min_R1 2 SSDKLNLVTK 10 1 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.978)S(0.022)DKLNLVTK;S(0.973)S(0.027)DKLNLVTK 143.93 1.2397e-08 36079000.0 6941.799999999999 7334.9 9436.3 8396.8 13933.099999999999 10923.4 10424.4 10799.2 17584.9 13321.1 13735.5 True False 8113.406129284591 7708.21508010904 10774.509232579683 10454.016376946682 11883.559447065967 12079.306937633914 12318.378544380796 12330.019671162949 13601.948227314986 10311.854258094245 10324.596269485131 0.7858327742329426 0.7465875545071977 1.0435768093348399 1.0125351252565737 1.1509950739854526 1.169954410065885 1.1931099505351497 1.194237464529722 1.3174314880976252 0.9987658586294027 1.0 13.333797747499284 -5.94244036064966 1.1532022937233808 1.16132655972077 0.7143385336517252 0.6730403653130227 0.09528350656576351 0.34394346665614167 0.6995879968201326 0.017762381820366654 0.13751318805929622 1.1417200801975982e-06 5.94244036064966 -0.44698802606904486 S(ph)SDKLNLVTK ddPTM_A549_PD325901_60min_R1 4 SSDKLNLVTK 10 1 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.943)S(0.057)DKLNLVTK;S(0.954)S(0.046)DKLNLVTK;S(0.949)S(0.051)DKLNLVTK;S(0.912)S(0.088)DKLNLVTK 102.63 0.00010972 59748000.0 16584.6 16220.300000000001 16841.899999999998 18141.0 21349.1 18025.0 16961.8 18054.800000000003 20984.3 20436.0 19621.0 True False 18268.256383062755 17587.241606147796 17984.892612572035 19261.528368799743 19849.612866396677 17878.210376169707 17607.2905808531 17694.6828502834 20102.40284586894 19145.667472370424 17207.741387766848 1.0616301100416257 1.0220540400874887 1.0451628838028488 1.1193525015719352 1.1535280789672933 1.0389632185476416 1.0232191537565933 1.028297813846896 1.1682185588958196 1.1126194333662678 1.0 14.070770127566373 -6.033460012072044 23.495859749767778 1.0780437975412682 1.039783642218658 0.09004725852341311 0.05276137132626072 720.2676559371076 505778.7539070159 0.009521513787049905 0.02521580323155761 9.258486292706679e-07 6.033460012072044 -0.03826015532261029 S(ph)SDSEEAFETPESTTPVK ddPTM_A549_MK2206_60min_R1 1 SSDSEEAFETPESTTPVK 18 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;E9PGB3 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 S(0.5)S(0.5)DSEEAFETPESTTPVK 187.78 7.075399999999999e-40 4159900.0 1353.7 1375.4 1551.2 1329.2 1904.5 1140.2 1708.0 1508.6 2151.1 1487.4 2381.0 True False 1582.1714652125609 1445.4019851916137 1771.1834852195902 1654.8540596700545 1624.3505728758937 1260.8552071964955 2018.3214912898964 1722.4486698937355 1663.8792846008366 1151.3953069558356 1789.731987743009 0.8840270364770101 0.807608063715941 0.9896361563348879 0.9246379184164629 0.907594312444695 0.7044938660265729 1.1277227568777806 0.9624059254066734 0.9296806985604127 0.643333926443274 1.0 10.80552784483108 -7.768782780890021 24.99999995395657 0.9765237206783585 0.8765212940738507 0.004759687585023875 0.1304871635192014 179.73599354950093 611896.0682922341 0.012828055793445276 0.0179168758244649 1.7030100822762634e-08 7.768782780890021 -0.10000242660450775 S(ph)SDTEEESR ddPTM_A549_PD325901_60min_R1 2 SSDTEEESR 9 0 C9J8Q2;C9JVB3;F8WDM0;C9J367;C9J713;Q96IZ7-2;Q96IZ7 C9J8Q2 RSRC1 Serine/Arginine-related protein 53 1 S(0.457)S(0.457)DT(0.085)EEESR;S(0.497)S(0.497)DT(0.006)EEESR 98.249 0.00083986 32646900.0 679.3100000000001 640.3 537.74 188.14 417.83 361.58 237.28 567.36 457.83000000000004 394.25 536.19 True False 748.2730511184095 694.2603281330457 574.2342700933079 199.76098050305836 388.48306223524776 358.635412361467 246.30982024459817 556.0435597146904 438.58899724671164 369.3569877168742 470.24202918845657 1.5912508977765742 1.4763893591799946 1.2211462065275644 0.4248046072100483 0.8261342843082138 0.7626613320387371 0.5237937167583244 1.1824624878263437 0.9326877863376617 0.7854614534441132 1.0 8.87725967940784 -5.956690872788155 4.100165867195955 0.8948109175987645 1.5204526209748042 0.6266523009692385 0.2137922322107602 0.1135117919216952 4.113223938345853 0.030292195197195924 0.09975774854523063 1.1048647736663983e-06 5.956690872788155 0.6256417033760396 S(ph)SEDEEMK ddPTM_A549_MK2206_60min_R1 1 SSEDEEMK 8 0 Q13129 Q13129 RLF Zinc finger protein Rlf 1 S(0.613)S(0.387)EDEEMK 95.09 0.0025186999999999996 22777000.0 12334.0 13773.0 12498.0 12309.0 5634.5 1823.4 1346.1 1447.2 2766.7 16253.0 15353.0 True False 14415.677662651797 14473.986870760582 14270.404331017548 15324.70555257201 4805.672513977018 2016.350977725038 1590.668945799374 1652.345031864122 2140.0468675120333 12581.43601180127 11540.426378756163 1.2491460184858032 1.2541986227999837 1.2365578066757377 1.3279150223411174 0.41642070719530705 0.17472066555849058 0.1378345039943678 0.14317885471768965 0.18543915079701667 1.0902054741202125 1.0 13.494408907098995 -6.76107219756781 24.99995155024988 0.48865580010530624 1.2638721632934187 0.6129974287594795 0.3113951807225226 6.425786947121838 437445.2158282475 0.05400240819958859 0.10717714817064951 1.7335157923249687e-07 6.76107219756781 0.7752163631881124 S(ph)SEDLAGPLPSSVSSSSTTSSKPK ddPTM_A549_PD325901_60min_R1 2 SSEDLAGPLPSSVSSSSTTSSKPK 24 1 Q9NRF2-2;Q9NRF2-3;Q9NRF2 Q9NRF2-2 SH2B1 SH2B adapter protein 1 1 S(0.834)S(0.166)EDLAGPLPSSVSSSSTTSSKPK;S(0.958)S(0.042)EDLAGPLPSSVSSSSTTSSKPK 204.41 2.9928999999999996e-62 69462000.0 6356.2 6054.9 5729.9 6845.299999999999 7460.5 6720.1 6420.9 7210.4 7057.4 7193.3 6501.0 True False 7001.476744812873 6565.167672673395 6118.7654706877765 7268.118634195736 6936.500217327774 6665.373733642051 6665.250863151299 7066.582915550622 6760.802020769599 6739.113810383746 5701.418213234405 1.2280237097080005 1.1514972989411676 1.0732006041031343 1.274791352320837 1.2166271544905156 1.1690729366546144 1.1690513857902232 1.2394430036981554 1.1858105769326133 1.1820065742135162 1.0 12.477105115291105 -10.537721048342048 0.7508039884407305 0.9939737137631665 1.1891870118187118 0.028178947013896116 0.07299963195309046 0.3508750787933079 0.3398075398309993 0.04007208382209659 0.010093238256807505 2.8992051780511806e-11 10.537721048342048 0.19521329805554533 S(ph)SEEHLR ddPTM_A549_MK2206_60min_R1 1 SSEEHLR 7 0 P05305 P05305 EDN1 Endothelin-1;Endothelin-1;Big endothelin-1 1 S(0.5)S(0.5)EEHLR 50.607 0.015916999999999997 2286900.0 0.0 104.11 0.0 0.0 0.0 90.97399999999999 0.0 75.987 108.75 112.92 99.171 True False 0.0 109.40875431023625 0.0 0.0 0.0 100.6008082963462 0.0 86.75838995042773 84.11829863806472 87.41129357365402 74.54410371963962 0.0 1.4677050075177318 0.0 0.0 0.0 1.3495474930479525 0.0 1.1638531503004723 1.1284366494556517 1.1726117722524092 1.0 6.220022337793784 -8.28286297020106 24.123616800462244 1.0700855124315174 0.4334234416172783 0.30825522328381316 0.5113193405692811 503.30864119922893 566739.2918301536 0.07909490108412592 0.09567367509619136 5.213591858516536e-09 8.28286297020106 -0.6366620708142391 S(ph)SEGSLGGQNSGIGGR ddPTM_A549_MK2206_60min_R1 1 SSEGSLGGQNSGIGGR 16 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 S(0.954)S(0.045)EGSLGGQNSGIGGR 48.883 0.023753 2821100.0 1008.1 1371.4 632.09 794.79 1328.8 978.71 1082.4 1041.8 1611.8 1336.2 1654.4 True False 1178.2426343213292 1441.1984022769961 721.7298666660976 989.5135856794786 1133.3352802507156 1082.2764425848811 1279.058069187461 1189.4783403786919 1246.7298735157033 1034.3514919687966 1243.5668208828367 0.9474703043981727 1.1589231700905755 0.5803707967648453 0.7957060039419516 0.9113585705399689 0.8703001916829433 1.02853988037364 0.9565053685931036 1.0025435325064567 0.8317618921631301 1.0 10.280268314988318 -7.754203854676095 24.7455055270264 0.9990323801550609 0.8744884183232138 0.06298344662721123 0.1384952264239209 198.4207990073799 678596.2035461043 0.019577558313415643 0.0286992232762687 1.7611491817276834e-08 7.754203854676095 -0.12454396183184713 S(ph)SEKSDDDKKPK ddPTM_A549_PD325901_60min_R1 2 SSEKSDDDKKPK 12 3 Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766 RREB1 Ras-responsive element-binding protein 1 1 S(0.346)S(0.346)EKS(0.308)DDDKKPK;S(0.346)S(0.346)EKS(0.308)DDDKKPK 44.806999999999995 0.016583 16000400.0 4166.0 4721.700000000001 3369.0 3231.0 3666.0 2585.9 2004.7599999999998 2548.68 3632.3 4057.6000000000004 5391.200000000001 True False 4588.929253152893 5119.614229807589 3597.64059944277 3430.5715318665966 3408.5128070134224 2564.841287752412 2081.0522388467657 2497.844577999218 3479.6470626635037 3801.4024435256542 4728.116577632569 0.9705617824361326 1.0828020303109889 0.7609035311147418 0.7255683051673675 0.7209028692604932 0.5424657462732576 0.44014402028318356 0.5282958947788724 0.7359478146382358 0.8039993052432449 1.0 12.207049892068174 -5.767615081628524 24.820135128781935 0.7726546295942813 1.0266819317900995 0.3036650491795734 0.1619791346794646 155.9864920410739 626922.4418093782 0.029429757232290993 0.09495767179198653 1.7075951725825702e-06 5.767615081628524 0.25402730219581815 S(ph)SEMLVK ddPTM_A549_MK2206_60min_R1 2 SSEMLVK 7 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 S(0.994)S(0.006)EMLVK;S(0.987)S(0.013)EMLVK 128.36 0.0057607 12186100.0 4787.6 5519.7 4729.3 4094.3999999999996 7832.799999999999 5571.6 5575.4 5907.6 7362.0 8112.7 7594.099999999999 True False 5595.629834418006 5800.629153455103 5399.985853951137 5097.5281838045985 6680.605496047416 6161.183013871243 6588.3780108534465 6745.0203912662255 5694.518754698231 6280.035435485145 5708.275383502389 0.980266272820344 1.0161789268646058 0.9459925268423023 0.8930067036599313 1.170336931423312 1.0793422881590142 1.15418012766074 1.181621407187214 0.9975900551602825 1.1001633617108264 1.0 12.478839220882522 -6.726391386115681 24.998682747376467 1.040927217506396 0.9620361342306366 0.2856821741174794 0.07757229325236004 276.9519275517102 197540.3093688731 0.012697607154448547 0.02643133405354251 1.8776239397218247e-07 6.726391386115681 -0.07889108327575933 S(ph)SEMLVK ddPTM_A549_PD325901_60min_R1 2 SSEMLVK 7 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 S(0.985)S(0.015)EMLVK;S(0.976)S(0.024)EMLVK 115.71 0.0072218000000000004 13146500.0 3981.4 4204.4 4276.200000000001 3644.2 4917.9 4685.1 4023.6000000000004 4297.2 4143.7 4716.5 4761.9 True False 4385.588797048234 4558.719543343084 4566.408646879542 3869.2939574213115 4572.483669833963 4646.946098939956 4176.720299798402 4211.488974911817 3969.5546991049055 4418.699385077077 4176.21648817119 1.0501344481230976 1.091590811026034 1.093431976003529 0.9265070353466559 1.0948866474679102 1.1127167645887304 1.0001206382927321 1.0084460388585061 0.9505145890660511 1.0580628177664404 1.0 12.027980785438563 -7.939955141979557 7.242793753916613 0.9795452007546831 1.059772490119663 0.17293825619534675 0.05419180400416465 0.18482665894078837 18.552006598789596 0.007795522844202743 0.010783227964809914 1.1482722197309517e-08 7.939955141979557 0.08022728936497991 S(ph)SEMSPVPMR ddPTM_A549_MK2206_60min_R1 1 SSEMSPVPMR 10 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.401)S(0.401)EMS(0.199)PVPMR 65.347 0.001586 5597900.0 641.84 648.31 760.53 863.08 966.36 820.32 637.16 730.04 1316.5 1320.6 934.23 True False 750.1669005186014 681.3062098440996 868.384590003903 1074.5346387451334 824.2097241293508 907.1257179156543 752.9237244673717 833.5254056537335 1018.3148520185025 1022.2755428034668 702.2349075636926 1.068256351882595 0.9701970131445015 1.2366012863368525 1.5301640906361142 1.173695177001145 1.2917696174671838 1.0721821378540366 1.1869609395316665 1.450105713985945 1.4557458363186633 1.0 9.455809903050222 -11.16928315327911 1.5812624353287457 1.0004362036014618 1.2520345430857163 0.0 0.20700020734732436 0.4872616082348513 2.193431493211963 0.12589052887281843 0.026842414188944032 6.771998398338563e-12 11.16928315327911 0.2515983394842545 S(ph)SEMSPVPMR ddPTM_A549_PD325901_60min_R1 1 SSEMSPVPMR 10 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.362)S(0.362)EMS(0.276)PVPMR 43.512 0.01883 17844000.0 724.78 767.87 803.78 757.75 860.26 460.17 650.21 755.74 887.92 633.58 1043.4 True False 798.3591320451644 832.5810997399992 858.3293443217893 804.5544965248878 799.8383053358879 456.4225280888772 674.9540973585646 740.6661728334392 850.6038102249747 593.5756506725608 915.0684146575571 0.8724584077617099 0.9098566690792984 0.9379947232065692 0.8792287916810826 0.8740748697300502 0.49878514084619846 0.73759960080269 0.8094107074066327 0.9295521477957397 0.6486680571252069 1.0 9.837735799616656 -8.916181649272513 2.6244955587058096 0.9721746127466181 0.8129355963545812 0.0 0.14991237078219113 0.28153879605213955 3.775289600346536 0.023126801298151353 0.02391128662720503 1.2128814410396778e-09 8.916181649272513 -0.15923901639203686 S(ph)SENVLDEEGGR ddPTM_A549_PD325901_60min_R1 1 SSENVLDEEGGR 12 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 S(0.913)S(0.087)ENVLDEEGGR 51.773999999999994 0.026242 883820.0 213.04 292.76 176.38 195.03 286.77 255.86 83.473 324.29 222.49 204.02 253.99 True False 234.6676639682411 317.43191264130934 188.3502074591023 207.07656015473307 266.62826450279294 253.77636099011266 86.64961069317825 317.8217815494165 213.13951902981654 191.13814238172898 222.75084017526635 1.0534984459928334 1.4250537164822605 0.8455645209279719 0.9296331272726049 1.1969798376203773 1.1392835187083228 0.38899790737040546 1.426803963115676 0.9568516952039895 0.8580804554152809 1.0 7.7992870631129625 -5.767868337988075 24.999467383910574 0.9847802951996996 1.2392760879914164 0.1373156808020326 0.2572149875368811 187.46236669470207 728973.9536571918 0.03139293389971949 0.10106414623403046 1.7065996884435482e-06 5.767868337988075 0.25449579279171686 S(ph)SESSCGVDGDYEDAELNPR ddPTM_A549_MK2206_60min_R1 1 SSESSCGVDGDYEDAELNPR 20 0 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 S(0.291)S(0.291)ES(0.208)S(0.208)CGVDGDY(0.002)EDAELNPR 51.606 0.012605 1022800.0 210.03 298.53 221.13 173.43 286.78 404.36 0.0 363.87 442.29 406.49 292.29 True False 245.47792925950668 313.7239018752745 252.48955910688997 215.92035778556863 244.59504189516878 447.14910680755526 0.0 415.4496868051397 342.1120211919969 314.6636266804343 219.70632620638563 1.1173002320784882 1.4279238440342932 1.1492138777547476 0.9827680500321117 1.1132817434915525 2.0352127065631995 0.0 1.890931836049539 1.5571332291571205 1.4322010299550891 1.0 7.779432600979614 S(ph)SFSQHAR ddPTM_A549_MK2206_60min_R1 1 SSFSQHAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.495)S(0.495)FS(0.011)QHAR 93.111 0.00078951 6276200.0 611.94 610.18 506.58 491.13 652.62 508.07 319.15 496.97 847.61 918.44 782.47 True False 715.2205115034168 641.235555710498 578.4206613863715 611.4568720476635 556.6204625204864 561.8336301704288 377.1354238554863 567.4170194067945 655.6276883550347 710.9637661157177 588.1611039266157 1.2160282390803152 1.0902379491427647 0.9834391589732538 1.039607801273364 0.9463741461385984 0.9552376490379552 0.6412110922291473 0.9647306080233257 1.114707660839872 1.2087908591188035 1.0 9.200067569328441 -5.394371850283716 2.3191189027245294 1.0032703916093313 1.23836327050617 0.20716905202406832 0.13313471753988146 0.5782785820844362 4.442434642491439 0.018555489401922073 0.24227193247730422 4.032999328679179e-06 5.394371850283716 0.23509287889683872 S(ph)SFSSDPDEK ddPTM_A549_MK2206_60min_R1 1 SSFSSDPDEK 10 0 P46013 P46013 MKI67 Antigen KI-67 1 S(0.969)S(0.031)FSSDPDEK 195.8 3.1890999999999998e-19 31069000.0 6163.4 7204.0 6635.8 7197.4 10007.0 9404.3 8079.5 10841.0 10979.0 12340.0 11007.0 True False 7203.631239337447 7570.652829228146 7576.85622177679 8960.763323103558 8534.983556192743 10399.456783930886 9547.440567258029 12377.744949170085 8492.274029860346 9552.3854294978 8273.658122254223 0.8706706432504564 0.9150308989520421 0.9157806752247598 1.0830473281221498 1.0315852347386236 1.2569357629074323 1.1539563789296088 1.4960425928014622 1.0264231255843286 1.1545540422807774 1.0 13.014309629530445 -6.230587868839927 4.170766800334143 1.0803184134904251 0.8977281487633536 0.29885628835749156 0.14392882894679457 0.2767106381053547 11.145997193742634 0.02245247841943679 0.060575346621198324 5.88047125188768e-07 6.230587868839927 -0.18259026472707152 S(ph)SFSSDPDESEGIPLK ddPTM_A549_MK2206_60min_R1 1 SSFSSDPDESEGIPLK 16 0 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.485)S(0.485)FS(0.001)S(0.029)DPDESEGIPLK 183.96 4.801199999999999e-34 4694400.0 2284.6 2268.7 2113.8 2384.5 3403.4 2816.0 2371.2 2374.9 4162.7 3793.4 3878.6 True False 2670.184626892679 2384.167139598817 2413.568624972388 2968.702607044272 2902.764368456717 3113.9872508904823 2802.0163466900494 2711.54934782622 3219.8550964659485 2936.46830536928 2915.4365760856926 0.9158781394166726 0.8177736257942658 0.827858388266803 1.018270344618539 0.9956534099445272 1.068103239299881 0.961096656903467 0.9300663132472549 1.1044161011346618 1.007213921049116 1.0 11.509496222630862 -6.28748327853228 7.240016619792421 1.0314719885865236 0.8501266674054965 0.6193957869813349 0.05290531249957017 0.0926233877631782 20.3626167191822 0.00853130805663754 0.02034690550187321 5.15842025950333e-07 6.28748327853228 -0.18134532118102709 S(ph)SFSSDPDESEGIPLK ddPTM_A549_PD325901_60min_R1 2 SSFSSDPDESEGIPLK 16 0 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.499)S(0.499)FS(0.002)SDPDESEGIPLK;S(0.497)S(0.497)FS(0.005)S(0.001)DPDESEGIPLK 257.04 1.0220999999999998e-77 18229700.0 7375.0 8899.4 7175.700000000001 8788.4 9049.099999999999 7252.1 7740.2 8068.6 8255.3 9070.8 9765.4 True False 8123.7045708119485 9649.383670447021 7662.686152989454 9331.239508095447 8413.522433700256 7193.041302026092 8034.757546599956 7907.665443305752 7908.358449579058 8498.068139967585 8564.31770797097 0.948552453075283 1.1266961361634402 0.8947223134725198 1.0895484995156928 0.98239261089878 0.8398849210523093 0.9381666842090478 0.923326961112844 0.9234078789742471 0.9922644663285057 1.0 13.064122600611142 -5.773555078067945 24.99999606016489 0.9566464624139623 1.037624335608858 0.16622827659470552 0.07221555814011454 257.5163862033971 531373.2928216779 0.009627765233674163 0.03024928501315239 1.684398794507885e-06 5.773555078067945 0.08097787319489558 S(ph)SFSSDPDESEGIPLKR ddPTM_A549_MK2206_60min_R1 1 SSFSSDPDESEGIPLKR 17 1 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.643)S(0.356)FSS(0.001)DPDESEGIPLKR 266.24 2.993399999999999e-100 36828000.0 5809.2 7280.0 7202.0 7215.9 12622.0 10464.0 10302.0 10280.0 16221.0 15738.0 15736.0 True False 6789.650938696022 7650.5209046058935 8223.351895662374 8983.79582393406 10765.320520262296 11571.293534558961 12173.740048752059 11737.22148117964 12546.969399614227 12182.774869484301 11828.316908493907 0.5740166577563016 0.6467970856540087 0.6952258685051962 0.7595159897586784 0.9101312218420294 0.9782705032403741 1.029203067767833 0.9922985300428625 1.0607569527160923 1.029966897550391 1.0 13.529957181839276 -6.619334150430106 0.9575983918420031 1.028599456847417 0.5924456289760646 0.9815932565386192 0.022836906066741436 0.06350352416207723 0.10636393895457065 0.004417703533781532 0.01738723330380756 2.4025135712064327e-07 6.619334150430106 -0.4361538278713525 down S(ph)SFSSDPDESEGIPLKR ddPTM_A549_PD325901_60min_R1 1 SSFSSDPDESEGIPLKR 17 1 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.5)S(0.5)FS(0.001)SDPDESEGIPLKR 211.06 2.4214999999999996e-55 62298000.0 11937.0 12038.0 12279.0 12300.0 15095.0 13175.0 13070.0 13608.0 14029.0 15234.0 14555.0 True False 13148.835452445053 13052.484507364672 13112.326779625346 13059.743064673215 14034.77927492296 13067.707168157327 13567.386002178435 13336.577764730508 13439.409917161647 14272.122640149295 12764.82727174693 1.030083304107692 1.0225351451683509 1.0272232048644758 1.023103782499199 1.0994883813263092 1.023727692507111 1.0628726666915307 1.0447910873223536 1.0528469857878773 1.118081924362466 1.0 13.639886395486403 -2.567371505905951 22.777906987941346 1.0331819942123446 0.2140157582888319 0.0 0.03625417523010975 0.0 0.0 0.003788925528095282 0.0 0.002707874260338904 2.567371505905951 -0.8191662359235127 S(ph)SGDGEELER ddPTM_A549_PD325901_60min_R1 1 SSGDGEELER 10 0 Q9BS91 Q9BS91 SLC35A5 Probable UDP-sugar transporter protein SLC35A5 1 S(0.5)S(0.5)GDGEELER 49.5 0.029044 9697300.0 356.98 253.64 207.68 247.56 223.37 286.75 327.22 238.91 286.56 315.27 392.3 True False 393.22034680521347 275.01513294965747 221.77441368129246 262.85121895044733 207.68126178466656 284.4148030716593 339.6725361616546 234.1447526287307 274.5168797392433 295.363798395685 344.0495869945941 1.1429176539351344 0.799347371267092 0.6446001450505363 0.7639922525312532 0.6036375849157167 0.8266680554862232 0.9872778488962165 0.6805552498233626 0.797899169527434 0.8584919429080028 1.0 8.426472701666007 -10.568362852411507 0.7246397682274232 1.0100706909363948 0.7946204273978447 0.05821854033432994 0.15107934554441035 0.9716713388782345 0.8531283050093633 0.12170286221641546 0.02855581272501877 2.7017001543032603e-11 10.568362852411507 -0.21545026353855012 S(ph)SGDPEQIKEDSLSEESADAR ddPTM_A549_MK2206_60min_R1 1 SSGDPEQIKEDSLSEESADAR 21 1 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 S(0.877)S(0.123)GDPEQIKEDSLSEESADAR 72.848 0.0001078 4951100.0 1295.3 1517.1 1484.5 1369.0 2060.6 1871.0 1394.8 1527.0 2339.1 2253.5 2216.2 True False 1513.9149729554779 1594.3139099419786 1695.0244222592066 1704.4050614567461 1757.4884696603149 2068.987978130716 1648.2171054163628 1743.4569262413725 1809.2975847751463 1744.4327848762773 1665.8563759916235 0.9087908146068712 0.9570536409496537 1.0175093403536788 1.023140461579214 1.0550059987099105 1.241996613843209 0.989411289694911 1.046582977601269 1.0861065880893468 1.0471687775831695 1.0 10.702048306868168 -5.6752435448955 1.4126677860893357 1.0531279273993939 0.8969042306344793 0.3832500607489079 0.0634848757336173 0.568310256767806 1.6458193629261197 0.009655263631288595 0.10096467248847524 2.1123041636983643e-06 5.6752435448955 -0.15622369676491454 S(ph)SGDPEQIKEDSLSEESADAR ddPTM_A549_PD325901_60min_R1 2 SSGDPEQIKEDSLSEESADAR 21 1 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 S(0.957)S(0.043)GDPEQIKEDSLSEESADAR;S(0.805)S(0.195)GDPEQIKEDSLSEESADAR 125.0 7.545200000000001e-16 10750900.0 2570.3 3055.4 2733.6000000000004 2394.0 2808.8 2901.3 2587.1000000000004 2911.8 3023.3 2933.9 2920.3 True False 2831.2349638451465 3312.889280927231 2919.118534472174 2541.8719428315194 2611.5195778339607 2877.6727747229497 2685.5535062154395 2853.7218647370905 2896.2412148089543 2748.653053297494 2561.1216133069433 1.1054668193555364 1.2935306405265148 1.1397813049193637 0.9924838905050789 1.0196780833308197 1.1235986451292614 1.0485849216460394 1.114246918190011 1.1308487655411652 1.073222387807039 1.0 11.32256004472327 -14.999861960758468 0.015586104415411162 3.915425592374957e-06 1.9504097783274068 0.16075219145440256 0.07403320029791173 4631.4259945206895 5.614682234394986 440.973735487328 279.0349969355137 1.0003178976185426e-15 14.999861960758468 1.9504058629018144 S(ph)SGENVENNSQR ddPTM_A549_PD325901_60min_R1 1 SSGENVENNSQR 12 0 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 S(0.859)S(0.141)GENVENNSQR 47.915 0.034421 2161500.0 218.61 213.18 393.9 255.92 314.6 265.47 170.33 256.24 284.46 299.18 309.24 True False 240.8031262678239 231.14542675527503 420.6324227131217 271.72759716350953 292.50358131108067 263.3081003362981 176.8120013581524 251.12909218360858 272.5051354362964 280.28972374162197 271.20544043387287 0.8878993204656532 0.8522890484257615 1.5509733950771651 1.0019253180496723 1.078531392449706 0.9708805985420474 0.6519485784477244 0.9259736522315103 1.0047922895659627 1.0334959479176233 1.0 8.083242309282326 -7.2599872413011735 6.313024732779031 0.9647023903450894 1.0847958778151174 0.10292540136801753 0.19631704776415942 0.329493414935816 66.99914956022982 0.029143530227070197 0.04882337844341529 5.495570185009171e-08 7.2599872413011735 0.12009348747002802 S(ph)SGFISELPSEEGK ddPTM_A549_MK2206_60min_R1 1 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.651)S(0.349)GFISELPSEEGK 222.56 7.0907e-47 16769000.0 3068.9 3646.0 3196.2 2782.0 4419.0 2474.9 2474.0 2981.1 4924.2 3153.7 3752.3 True False 3586.8552925986774 3831.5658266748756 3649.4692208992087 3463.5901248887258 3768.970953813905 2736.79227529434 2923.493776025296 3403.68005423586 3808.8765623315685 2441.2769796602265 2820.5003517883647 1.2717088619841506 1.358470253068905 1.2939084437926869 1.2280055638683414 1.336277427309716 0.9703215507699019 1.0365160118386894 1.2067646267364316 1.3504258419668391 0.8655474827763492 1.0 11.46173540154576 -11.003177423779618 1.2683642891694706 0.999333146563216 1.236587839969592 0.42417904247475435 0.1263996613686088 0.4590596448090806 1.3085976532835972 0.09415178724078567 0.021178288837199424 9.927104102586424e-12 11.003177423779618 0.23725469340637595 S(ph)SGGREDLESSGLQR ddPTM_A549_MK2206_60min_R1 2 SSGGREDLESSGLQR 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 S(0.955)S(0.045)GGREDLESSGLQR;S(0.858)S(0.142)GGREDLESSGLQR 86.479 1.6232e-05 112419000.0 1016.69 972.0799999999999 1347.28 1027.97 1547.1 947.84 1016.3 1195.99 1593.0 1413.15 1910.33 True False 1188.2824163159924 1021.5547199106182 1538.3445628975305 1279.8226961473276 1319.5236394309768 1048.1397996747294 1200.9485547997206 1365.5252450657615 1232.1880434982713 1093.9184335247003 1435.942338574171 0.8275279476026216 0.711417647121526 1.0713136047127356 0.8912772203778995 0.9189252269984651 0.7299316772813366 0.8363487324931242 0.9509610576854147 0.8581041246557164 0.7618122289025299 1.0 10.487782102400134 -10.844587326578013 0.5799630630367592 1.0266351730392183 0.8636862561004625 0.0 0.11798344917222099 1.6819242471553608 0.7402833961124795 0.1497407105165482 0.02026223711893564 1.4302523612264424e-11 10.844587326578013 -0.1629489169387558 S(ph)SGGREDLESSGLQR ddPTM_A549_PD325901_60min_R1 3 SSGGREDLESSGLQR 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 S(0.873)S(0.127)GGREDLES(0.001)SGLQR;S(0.812)S(0.188)GGREDLESSGLQR;S(0.5)S(0.5)GGREDLESSGLQR 139.6 2.0993999999999998e-10 194625000.0 2345.52 2769.59 2927.87 3169.12 3364.73 3032.54 3099.35 2996.6499999999996 2920.92 3270.5 3473.75 True False 2583.6354637194377 3002.9930691769514 3126.5728649125845 3364.8693448062727 3128.4029724883435 3007.8439996754323 3217.2974602793965 2936.8794649235515 2798.163890172914 3064.0000718529786 3046.500771915554 0.8480665711746793 0.9857187947760648 1.0262832997566198 1.1045030337184314 1.0268840242312796 0.9873110906137025 1.0560632348884817 0.9640173053614308 0.9184845498704755 1.0057440654861287 1.0 11.5729373905642 -8.475279668557466 23.119417498238697 0.9604405006130899 1.009116855887657 0.045516281929762314 0.06342545240816909 301.6334547919781 146506.58251117662 0.010798639051763656 0.013054597989638827 3.347498040331505e-09 8.475279668557466 0.04867635527456715 S(ph)SGKTPETLVPTAPK ddPTM_A549_MK2206_60min_R1 3 SSGKTPETLVPTAPK 15 1 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.713)S(0.127)GKT(0.127)PET(0.031)LVPT(0.002)APK;S(0.354)S(0.354)GKT(0.288)PET(0.005)LVPTAPK;S(0.318)S(0.318)GKT(0.318)PET(0.047)LVPTAPK 93.37100000000001 6.8986e-06 8041500.0 4269.1 4777.9 4939.8 4776.5 6575.5 4606.0 4263.7 4580.4 6583.599999999999 6489.8 7780.9 True False 4989.619710525927 5021.074701939083 5640.337919215915 5946.7427144252315 5608.2526605121775 5093.403862784647 5038.359099773264 5229.6857268866925 5092.42511184885 5023.749672638148 5848.687788084663 0.8531178088683607 0.8584959368438765 0.9643766471355826 1.016765286487053 0.9588907569895736 0.8708626699413274 0.8614511976580019 0.8941639417889525 0.8706953245518556 0.8589532993833019 1.0 12.513897262524385 -10.909980374831486 1.1695708930280426 0.9998670220390258 0.904986926021221 0.0 0.06517953696230033 0.5151702263550679 1.254503658686381 0.039157953498007596 0.009355806270270271 1.23032436621707e-11 10.909980374831486 -0.09488009601780478 S(ph)SGKTPETLVPTAPK ddPTM_A549_PD325901_60min_R1 2 SSGKTPETLVPTAPK 15 1 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.807)S(0.162)GKT(0.029)PET(0.002)LVPTAPK;S(0.329)S(0.21)GKT(0.231)PET(0.231)LVPTAPK 96.447 4.7631e-06 7219800.0 3915.4 3919.9 4256.5 3998.7 4645.6 5076.1 3931.3999999999996 4145.2 5230.7 5022.6 5023.8 True False 4312.888525634864 4250.243729890247 4545.371686413814 4245.690617293395 4319.3090824499595 5034.7619245755905 4081.0115783446263 4062.520734153508 5010.87186924923 4705.472178837721 4405.904448492079 0.9788883476832891 0.9646699740265346 1.0316546215543707 0.9636365624648268 0.9803456096121748 1.1427306205650325 0.9262596649687564 0.9220628321941721 1.1373083388052598 1.0679923347970401 1.0 12.105222492097292 -8.75992760704022 24.99970444067918 1.064840045442168 0.9913347308711674 0.23486586478609006 0.06381755588250908 52.100043955808204 861563.5161714475 0.012471203809520564 0.013775862920326063 1.7380905285649753e-09 8.75992760704022 -0.07350531457100062 S(ph)SGPYGGGGQYFAK ddPTM_A549_MK2206_60min_R1 2 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;Q32P51 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 1 S(0.999)S(0.001)GPYGGGGQYFAK;S(0.986)S(0.014)GPYGGGGQYFAK 288.96 1.9577999999999997e-116 26057000.0 10121.599999999999 10492.5 9505.3 8640.1 13237.6 11487.900000000001 11025.4 12056.8 13857.599999999999 14357.8 14428.1 True False 11829.878630638586 11026.523432908978 10853.294470124913 10756.924887868834 11290.366575742688 12703.541952949145 13028.572464910783 13765.888322401426 10718.875726039954 11114.36300807483 10845.204574697575 1.0907934976384224 1.0167188047917906 1.0007459421693357 0.9918600256711891 1.0410468975461928 1.1713510672345608 1.2013210424178737 1.269306468825674 0.988351639861884 1.0248181978978264 1.0 13.404769646586196 S(ph)SGPYGGGGQYFAK ddPTM_A549_PD325901_60min_R1 1 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;Q32P51 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 1 S(0.644)S(0.356)GPYGGGGQYFAK 99.069 3.6331e-05 28892000.0 4918.1 6601.9 5603.8 6523.3 8336.5 6238.6 7137.6 6286.7 7958.8 7497.9 7504.0 True False 5417.38189148614 7158.265282370065 5984.10756638688 6926.229425510796 7750.972999363714 6187.794910001235 7409.225273844582 6161.306836679261 7624.319313472538 7024.481314400384 6581.055571775258 0.8231782625754043 1.0877077703264406 0.9092929699684409 1.0524496184496475 1.17777048299151 0.9402435281870839 1.125841469204601 0.9362186308080714 1.1585252897987393 1.0673791214477635 1.0 12.68410328899165 -4.358278819117299 0.9477958197211634 1.0633637424312756 6.579506232715691e-22 0.30316602017887684 0.08991700021487616 8.632253606569293 1.6570163743006552 0.01359956403216292 14.208037036760167 4.382492493422858e-05 4.358278819117299 -1.0633637424312756 S(ph)SGPYGGGGQYFAKPR ddPTM_A549_MK2206_60min_R1 1 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-2;P09651;P09651-3;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.818)S(0.182)GPYGGGGQYFAKPR 139.39 1.4786e-11 26495000.0 6002.3 6928.0 5968.3 5590.8 9454.4 7459.4 6211.3 6260.8 9978.7 8803.1 9513.5 True False 7015.341497854297 7280.605608119455 6814.694684654509 6960.546250980553 8063.670284167944 8248.748756851024 7339.8128096305245 7148.287572895867 7718.540382709481 6814.473595981525 7151.035390757292 0.9810245809888762 1.0181190848991788 0.9529661527703382 0.9733620197121461 1.1276227627946342 1.1535041159931227 1.0263986134255785 0.9996157454534519 1.0793598354562317 0.9529352357547031 1.0 12.803936427946995 S(ph)SGPYGGGGQYFAKPR ddPTM_A549_PD325901_60min_R1 2 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-2;P09651;P09651-3;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.835)S(0.165)GPYGGGGQYFAKPR;S(0.988)S(0.012)GPYGGGGQYFAKPR 273.82 9.163099999999999e-93 233080000.0 15677.9 14957.9 17633.1 17268.1 18771.2 18501.8 18763.4 19080.1 20105.7 17850.6 21500.4 True False 17269.508866540014 16218.454727754613 18829.78820244413 18334.71131829947 17452.77566912448 18351.127475052246 19477.451454726455 18699.53243745111 19260.727348455137 16723.510069597538 18855.98710226503 0.9158634216749945 0.8601222858179836 0.9986105792457955 0.972354892844462 0.9255827114470188 0.9732254999711928 1.03295846295879 0.9917026531697657 1.0214648134831132 0.886907165289091 1.0 14.20273505642875 -5.680994056566592 0.4571678966159148 1.0110962706537838 0.8361415852172169 0.14188338777651777 0.04991874734605974 1.7200329651951423 0.3027986032942774 0.007134407085042191 0.15059790569064302 2.0845194100946204e-06 5.680994056566592 -0.1749546854365669 S(ph)SGQLSGR ddPTM_A549_MK2206_60min_R1 4 SSGQLSGR 8 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.97)S(0.03)GQLSGR;S(0.988)S(0.012)GQLSGR;S(0.942)S(0.057)GQLS(0.001)GR;S(0.952)S(0.047)GQLS(0.001)GR 106.62 0.0018920000000000002 41862800.0 7956.599999999999 9259.099999999999 8309.4 7748.5 12704.7 9400.8 8571.9 9620.0 13126.1 12831.0 12281.5 True False 9299.479559806652 9730.34864118633 9487.797867511379 9646.882847843379 10835.855459814318 10395.586416253995 10129.303273529189 10983.664460014405 10153.059308074497 9932.468188483484 9231.664597843668 1.0073459083401735 1.0540188649682036 1.0277450796606646 1.0449776143401805 1.173770487973031 1.126079300875185 1.0972347582791506 1.1897815766162008 1.0998080790809979 1.0759130255667553 1.0 13.172375094020516 -6.540107685218552 24.898299439710897 1.0775738390974128 1.0328392118400254 0.19361568713908328 0.054123562197171494 472.7058701982695 683125.7341905603 0.009933633285619662 0.020682768174095305 2.8833164835360903e-07 6.540107685218552 -0.044734627257387416 S(ph)SGQLSGR ddPTM_A549_PD325901_60min_R1 3 SSGQLSGR 8 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.982)S(0.018)GQLSGR;S(0.909)S(0.082)GQLS(0.009)GR;S(0.961)S(0.039)GQLS(0.001)GR 109.16 0.0016942999999999997 38305100.0 9833.6 9482.2 9583.6 10981.900000000001 10507.8 10372.6 9124.7 10883.8 10465.400000000001 12191.3 12171.599999999999 True False 10831.899832886294 10281.298271783795 10234.000726868426 11660.227021295506 9769.768377942068 10288.128984624564 9471.945451727433 10666.714070824077 10025.575632408842 11421.539237419727 10674.570362129505 1.0147387169150106 0.963158040370324 0.9587271786765207 1.0923368927955026 0.9152376204856515 0.9637979455476793 0.8873373944239797 0.999264018031742 0.9392017938236539 1.0699764814835326 1.0 13.381890383924603 -5.255738559952403 22.338877079233534 0.9697173529999467 1.014738803515516 0.008494252455525708 0.058591059839451565 324.6280138018125 1271874.4879626299 0.006605851218161601 0.07624164912704226 5.549596914728068e-06 5.255738559952403 0.04502145051556938 S(ph)SGREEDDEELLR ddPTM_A549_MK2206_60min_R1 2 SSGREEDDEELLR 13 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 S(0.925)S(0.075)GREEDDEELLR;S(0.937)S(0.063)GREEDDEELLR 86.02799999999999 0.00021141 83320000.0 238.57 543.38 448.51 255.5 487.19000000000005 149.74 246.42000000000002 218.23 185.84 438.71 407.38399999999996 True False 278.83478352349897 571.0357210363668 512.1154621943258 318.09751146983086 415.52499637669064 165.5853874106325 291.1913242878549 249.16477080134553 143.74753672549832 339.60510630267225 306.21930957358165 0.9105721775409384 1.8647933137578714 1.672381349521883 1.0387898526477313 1.3569522998249848 0.5407411689393934 0.9509241095649599 0.8136807935081362 0.46942675471925827 1.1090257723315398 1.0 8.25842144892758 -6.940779655110604 1.5145092451614137 0.7520607785165804 1.4816283002093995 0.40650433929143603 0.31424288065252326 0.24000910120145869 1.0992983777813095 0.047768367981467934 0.10984101246179635 1.1460942796272018e-07 6.940779655110604 0.7295675216928191 S(ph)SGREEDDEELLR ddPTM_A549_PD325901_60min_R1 3 SSGREEDDEELLR 13 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 S(0.5)S(0.5)GREEDDEELLR;S(0.933)S(0.067)GREEDDEELLR;S(0.5)S(0.5)GREEDDEELLR 91.743 0.00015022 119763000.0 512.31 413.61 432.46000000000004 625.5 489.03999999999996 354.78 331.78 723.51 599.21 510.38 288.44 True False 564.3193340573113 448.46636626442097 461.80933619323844 664.1357143864308 454.69151749641094 351.8907893069339 344.40606945698244 709.0790254673847 574.0272875089054 478.1545196980043 252.96370857180906 2.23083120200666 1.7728486382350548 1.8255952160115654 2.625418950947669 1.7974575090771852 1.3910722265009896 1.361484109327151 2.80308598205935 2.269208064468092 1.890209953030753 1.0 7.982786613354275 -10.820072190856546 1.0800838701249325 1.0029541226296506 2.008591038775776 0.0683754728562247 0.5022510196167321 0.4091224211594873 0.8514740466020156 0.3072351942842078 0.07707139358111698 1.5133096767338897e-11 10.820072190856546 1.0056369161461254 S(ph)SGRNSPSAASTSSNDSK ddPTM_A549_MK2206_60min_R1 1 SSGRNSPSAASTSSNDSK 18 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.327)S(0.327)GRNS(0.327)PS(0.013)AAS(0.001)T(0.001)S(0.001)S(0.001)NDSK 45.618 0.028577999999999996 3932800.0 374.81 385.77 333.83 231.18 550.23 433.52 416.41 429.9 298.55 471.14 635.01 True False 438.0687647752974 405.40404524310657 381.17211376408954 287.8191103780645 469.2918958852736 479.39479865271403 492.06630690165434 490.83964151353354 230.92890168638377 364.70914677905915 477.31949161557657 0.9177684391068385 0.8493347796691503 0.7985680879570655 0.6029904821273634 0.9831819234887474 1.0043478363519436 1.0308950619974986 1.0283251577516677 0.48380362784842906 0.764077631828177 1.0 8.898811440648323 -4.346877984406995 17.017545436919203 0.8184214295955641 0.8551114541879024 0.0 0.1800107267717842 0.0 0.0 0.029760433668549507 0.0 4.499062388747815e-05 4.346877984406995 0.03669002459233828 S(ph)SGRNSPSAASTSSNDSKAETVK ddPTM_A549_PD325901_60min_R1 1 SSGRNSPSAASTSSNDSKAETVK 23 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.344)S(0.344)GRNS(0.303)PS(0.007)AASTSSNDSKAETVK 52.402 0.0016112000000000001 5954700.0 1315.0 1246.4 1233.4 1517.6 1498.9 1718.0 1472.6 1294.7 1565.9 1901.3 1660.6 True False 1448.497831948164 1351.438502241181 1317.10594103672 1611.3387052803298 1393.622434924282 1704.0091776010838 1528.640598837639 1268.8761928274987 1500.0906685639338 1781.251593522111 1456.3567274107133 0.994603729076377 0.9279584299678633 0.9043841500141451 1.10641759326725 0.9569238145396095 1.1700493055919594 1.0496333556651607 0.8712674367106882 1.0300296900684325 1.223087420819647 1.0 10.508148064533096 -6.233932486257216 24.847548801366962 1.0187729170120912 0.9408797377116432 0.14409827317362722 0.09709901166267798 898.7959281138866 811900.039976241 0.00994343704921827 0.026300191924427736 5.835358114465296e-07 6.233932486257216 -0.07789317930044792 S(ph)SGSEGSSPNWLQALK ddPTM_A549_MK2206_60min_R1 1 SSGSEGSSPNWLQALK 16 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.232)S(0.232)GS(0.205)EGS(0.166)S(0.166)PNWLQALK 57.678999999999995 0.0082644 2926400.0 736.58 807.58 941.88 576.43 1089.9 731.92 815.1 857.33 1083.7 815.78 1218.2 True False 860.8966963479854 848.6823725469267 1075.4527469434154 717.655375876926 929.5771537818002 809.3712885908252 963.193119174704 978.8591529630103 838.2436803132938 631.4947314161836 915.6873193903959 0.9401644842271197 0.9268255162820462 1.1744759637595295 0.7837340986164288 1.0151687525831976 0.8838948311850066 1.051879936282108 1.0689884333165933 0.9154256726754073 0.6896401403009392 1.0 9.838711233757058 -11.380191212978843 2.0941681558670853 1.0003107931561397 0.9643091744997256 0.0 0.136276288414677 1.5449527711857762 12.253925386531117 0.07332620055174201 0.013645986774940933 4.166858828853899e-12 11.380191212978843 -0.03600161865641405 S(ph)SGSETEQVVDFSDR ddPTM_A549_PD325901_60min_R1 1 SSGSETEQVVDFSDR 15 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 S(0.841)S(0.138)GS(0.019)ET(0.001)EQVVDFSDR 86.54799999999999 5.4413e-05 31415000.0 803.12 893.2 850.83 1127.7 825.1 814.76 1019.0 1209.5 900.97 940.52 1276.2 True False 884.6521511743045 968.4730986856727 908.572440256424 1197.3554678074781 767.1478224404729 808.1248646928175 1057.7786026181957 1185.375573665605 863.1053641075725 881.1354066898526 1119.2354904983465 0.7904075225316592 0.8652987748400062 0.8117795119701543 1.0697976234423627 0.6854212799300132 0.7220329158191677 0.9450902974379531 1.0590939831061015 0.7711561788692651 0.787265427311925 1.0 10.128297900270741 S(ph)SGSETEQVVDFSDRETK ddPTM_A549_PD325901_60min_R1 1 SSGSETEQVVDFSDRETK 18 1 O95251-4;O95251 O95251-4 KAT7 Histone acetyltransferase KAT7 1 S(0.467)S(0.467)GS(0.067)ETEQVVDFSDRETK 130.83 4.3968999999999997e-13 20310000.0 4923.4 5005.1 5352.6 5347.1 5176.2 6888.4 5760.1 5914.0 5749.2 6466.7 5980.4 True False 5423.219943584483 5426.8973423999805 5715.859623798565 5677.378222854805 4812.641568920585 6832.303154241738 5979.303757547661 5796.040630556754 5507.581117381554 6058.391458386075 5244.848712879102 1.0340088419075613 1.034709986786434 1.0898044799200521 1.0824674902278109 0.9175939731307785 1.302669252873687 1.1400335996088986 1.1050920527648702 1.050093419064175 1.1551127191732453 1.0 12.356685443674944 -9.341734595477568 1.4538884689049976 1.0140905859947105 1.0883322848654404 0.0 0.0975718280173112 0.57764398879464 2.5225207564279426 0.020049870956673425 0.017024373006646755 4.5526619583752547e-10 9.341734595477568 0.07424169887072996 S(ph)SGSNQPFPIKPLSESK ddPTM_A549_MK2206_60min_R1 2 SSGSNQPFPIKPLSESK 17 1 B4DRN8;Q5W0Z9 B4DRN8 ZDHHC20 Palmitoyltransferase;Probable palmitoyltransferase ZDHHC20 1 S(0.488)S(0.488)GS(0.024)NQPFPIKPLSESK;S(0.485)S(0.485)GS(0.03)NQPFPIKPLSESK 110.75 1.4868e-09 13451600.0 6231.5 7516.4 7154.8 6562.3 11234.5 7056.9 6829.5 6993.5 10392.400000000001 10414.4 9375.6 True False 7283.224854452299 7898.952654859854 8169.4582259212975 8170.063794592846 9581.919932252164 7803.6564740089025 8070.3317475201075 7984.8500416955085 8038.537993252632 8061.779806885073 7047.379766603677 1.033465641934929 1.120835390806046 1.159219241261122 1.1593051694630359 1.3596429097888605 1.1073131763083197 1.145153520144327 1.133023947359037 1.1406420910287656 1.143940027907743 1.0 12.782871244246817 -10.43787041446911 0.5772907980983878 0.9863570876340526 1.1592718192212252 0.01780589299881541 0.08521935999180076 0.8711913020671251 0.4728547042959084 0.0764167508864206 0.01712135965465779 3.648627990715763e-11 10.43787041446911 0.17291473158717263 S(ph)SGSSPAMETR ddPTM_A549_MK2206_60min_R1 1 SSGSSPAMETR 11 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.25)S(0.25)GS(0.25)S(0.25)PAMETR 40.589 0.034913 5303800.0 229.03 251.28 186.56 97.384 190.94 252.67 294.65 116.52 319.64 312.01 382.34 True False 267.6846647541057 264.06907869634193 213.01701328169582 121.2430843717339 162.8529789366885 279.40737169122843 348.18409098862304 133.03706682753423 247.2420503601931 241.5267242996439 287.3944259528191 0.9314191250113212 0.9188385537431876 0.7412009212616613 0.4218699926756342 0.5666532271694917 0.9722087363555829 1.211519986284576 0.4629076099387349 0.8602882590380589 0.8404015613695124 1.0 8.166888270608911 -7.2783599942319315 24.66812448525597 0.9187401126272726 0.7123252661740327 0.13440514352718347 0.215235016090581 955.0946043364106 1392405.2561846448 0.033172028962742774 0.05311634553533915 5.2679301252302195e-08 7.2783599942319315 -0.20641484645323993 S(ph)SIDSQASLSGPLSGGAPGAGAR ddPTM_A549_MK2206_60min_R1 1 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.5)S(0.5)IDSQASLSGPLSGGAPGAGAR 162.85 3.3145e-33 6446400.0 1071.2 1317.1 1326.6 1269.8 1818.9 1349.5 1484.9 1551.0 1669.4 1872.8 1828.7 True False 1251.9923716744443 1384.134764211047 1514.7318279346994 1580.9010570034884 1551.3422194822608 1492.303194274399 1754.687109143072 1770.858999738289 1291.2835654840019 1449.7331792839116 1374.5833204475605 0.9108159200322604 1.0069486102598544 1.1019570843050146 1.1500947476132268 1.128590894713569 1.085640406133045 1.2765229164658791 1.2882878566878742 0.9393999958209617 1.054671010275232 1.0 10.424778643206864 -8.816298031184798 24.999966221263154 0.9713832134194058 1.1198789366650086 0.1969481885582467 0.10471642067175622 83.7926224149045 38185.182977897646 0.018760919041123543 0.01997235629496903 1.5265181376063707e-09 8.816298031184798 0.14849572324560278 S(ph)SIEDAQCPGLPDLIEENHVVNK ddPTM_A549_MK2206_60min_R1 2 SSIEDAQCPGLPDLIEENHVVNK 23 0 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 S(0.5)S(0.5)IEDAQCPGLPDLIEENHVVNK;S(0.5)S(0.5)IEDAQCPGLPDLIEENHVVNK 117.83 9.0986e-16 13319900.0 1719.98 1998.12 1898.9699999999998 1617.44 2609.6 1847.99 1915.3200000000002 1653.2 2787.8 2581.7 2459.3 True False 2010.2705745263358 2099.8157733394414 2168.2725005978864 2013.7128726096398 2225.7312969162163 2043.5430752035181 2263.3088516963494 1887.5461627126645 2156.36775120181 1998.4921769314797 1848.5879367729465 1.0874627787713667 1.1359025619333316 1.1729344639038426 1.0893249017544437 1.2040169973204755 1.1054616524063778 1.2243447047736205 1.0210745862637873 1.1664945487884932 1.0810912140972957 1.0 10.85220795838941 -10.90382760699907 0.795258263217207 0.9853123770540629 1.1376871999795646 0.2253247602571372 0.05992003546306894 0.5587292883323154 0.5214691785686292 0.05711523143318315 0.009280184289020122 1.2478787608601466e-11 10.90382760699907 0.15237482292550164 S(ph)SIEDAQCPGLPDLIEENHVVNK ddPTM_A549_PD325901_60min_R1 2 SSIEDAQCPGLPDLIEENHVVNK 23 0 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 S(0.5)S(0.5)IEDAQCPGLPDLIEENHVVNK;S(0.5)S(0.5)IEDAQCPGLPDLIEENHVVNK 149.04 6.6299999999999995e-28 22048000.0 2360.4 2420.2 2542.4 1864.08 2406.4 1880.7 2377.2 2193.5 1865.0900000000001 2032.7800000000002 2431.0 True False 2600.026070365361 2624.1587476926393 2714.942552693171 1979.219987967157 2237.382765629324 1865.384202744098 2467.665646853754 2149.7489217325383 1786.706753325186 1904.4299238835954 2132.002411378685 1.2195230439181461 1.2308422981546703 1.2734237720385695 0.9283385316094792 1.0494278776084935 0.8749446964920762 1.1574403638962154 1.0083238697382042 0.8380416193665515 0.8932588038922868 1.0 11.057993354505003 -6.262759459184438 24.997480352911744 0.9505412824582827 1.2402209755653668 0.6599671807863156 0.0864106696573654 54.81694477827028 1038046.9111259584 0.013490337124044776 0.033028514250772835 5.460602213747092e-07 6.262759459184438 0.2896796931070841 S(ph)SIHNFMTHPEFR ddPTM_A549_PD325901_60min_R1 2 SSIHNFMTHPEFR 13 0 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 S(0.5)S(0.5)IHNFMTHPEFR;S(0.5)S(0.5)IHNFMTHPEFR 100.23 4.7582e-05 8142100.0 2475.8999999999996 2159.2200000000003 2189.7799999999997 2925.2 2872.0 2408.0 2475.6 2810.3 3135.5 2414.6 3374.2 True False 2727.2515453387537 2341.185047183248 2338.3916390168565 3105.8829603887866 2670.2806278621233 2388.3900463698546 2569.8103127003 2754.2463618622987 3003.725838994965 2262.141743921787 2959.1947908161096 0.9216194735820723 0.7911561126185878 0.7902121368536056 1.0495702986595965 0.9023673048321678 0.8071080868965594 0.8684153948485351 0.9307418255838141 1.0150483666425265 0.7644450277292886 1.0 11.53098895060755 -8.564613040239724 3.0864404636048177 1.007178562095891 0.874773398808818 0.0 0.10066785461129357 0.1807485824381227 3.5283552432524106 0.012106850823629816 0.014000270004150021 2.7251283372043906e-09 8.564613040239724 -0.13240516328707308 S(ph)SIIIKPSDPVER ddPTM_A549_PD325901_60min_R1 2 SSIIIKPSDPVER 13 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.5)S(0.5)IIIKPSDPVER;S(0.498)S(0.498)IIIKPS(0.004)DPVER 66.673 0.0013345 7995300.0 2914.8999999999996 3104.6 3120.9 3107.2 3842.5 3878.5 3493.3 3650.0 3859.8999999999996 3372.8 3609.3 True False 3210.818502164033 3366.2355375946477 3332.703041496271 3299.1246870367963 3572.616055905364 3846.914781912575 3626.2394431071084 3577.1978866303907 3697.681826163824 3159.840832394351 3165.378981237798 1.014355159744084 1.0634541890710054 1.052860672055465 1.042252667561057 1.1286534968107733 1.2153093846627703 1.145594086711568 1.130100979324616 1.168164017035923 0.9982503994383378 1.0 11.628162524164182 -6.747271427501972 24.630716873810805 1.1034025110049892 1.0453630441610553 0.21221042231441267 0.06248742895100324 356.23740964132423 619306.8919728447 0.010942782416403313 0.0226915273911055 1.7894871020170785e-07 6.747271427501972 -0.05803946684393391 S(ph)SIRVEEIIPAAR ddPTM_A549_MK2206_60min_R1 2 SSIRVEEIIPAAR 13 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 S(0.5)S(0.5)IRVEEIIPAAR;S(0.5)S(0.5)IRVEEIIPAAR 109.35 2.1776e-10 8060500.0 314.4 337.29 313.3 295.38 694.81 661.14 594.32 846.42 651.19 677.37 701.86 True False 367.46303365799616 354.456620317929 357.73065105679314 367.74811326011206 592.6043694092417 731.1013959707861 702.3002509973132 966.4026270525354 503.696504736748 524.3516465461034 527.5687916494365 0.6965215522114719 0.6718680595372696 0.6780739435673463 0.6970619170067901 1.123274118540015 1.3857934880586997 1.3312012805033087 1.8318040080253628 0.9547503808213291 0.9939019419756147 1.0 9.043215414212044 -6.756242375590739 10.330406417492066 1.110629713545852 0.6840632962302994 0.4852891968795361 0.25141141780347015 0.13274281100703803 195.05625958307633 0.04189770919532527 0.08403831572834015 1.752901951017422e-07 6.756242375590739 -0.42656641731555267 S(ph)SIRVEEIIPAAR ddPTM_A549_PD325901_60min_R1 3 SSIRVEEIIPAAR 13 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 S(0.5)S(0.5)IRVEEIIPAAR;S(0.827)S(0.173)IRVEEIIPAAR;S(0.5)S(0.5)IRVEEIIPAAR 114.63 5.4895000000000006e-06 22406100.0 2794.5000000000005 2702.55 2585.4799999999996 3558.91 3428.9700000000003 3038.58 2470.27 3530.5299999999997 3501.71 3116.21 3591.3500000000004 True False 3078.195582797832 2930.3033731000514 2760.946220554257 3778.7357878289545 3188.1309765043134 3013.834811917989 2564.27747663361 3460.110809502795 3354.5453062245438 2919.451968784276 3149.636717443374 0.9773176588112891 0.9303623357168125 0.8765919590864354 1.1997370258295164 1.0122218092162025 0.9568833114075397 0.8141502359405716 1.0985745722165188 1.065057848623094 0.9269170481204118 1.0 11.620969720840609 S(ph)SITEPEGPGGPNIQK ddPTM_A549_MK2206_60min_R1 1 SSITEPEGPGGPNIQK 16 0 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 S(0.5)S(0.5)IT(0.001)EPEGPGGPNIQK 155.98 3.3045e-20 3116800.0 2175.9 2117.1 1734.6 1473.7 3077.8 2394.0 2016.5 2191.5 3317.5 3084.5 3565.5 True False 2543.1387243525246 2224.851347134771 1980.59236298472 1834.756566156906 2625.059697137007 2647.3314909914147 2382.8719480012155 2502.151836187273 2566.091546958895 2387.709307721714 2680.08794720609 0.9489012205751193 0.8301411710963107 0.739002749909542 0.684588193484316 0.9794677446587347 0.98777784279474 0.8891021469968129 0.9336081074487462 0.9574654255782789 0.8909070727364855 1.0 11.388064628224337 -6.785895792650745 24.98502035085383 0.9695141274848762 0.7983602744448348 0.48502334049227125 0.07108357759177591 118.23284431918692 120788.07989305082 0.009979464979762293 0.01886556680285489 1.6372093166008455e-07 6.785895792650745 -0.17115385304004138 S(ph)SITEPEGPNGPNIQK ddPTM_A549_MK2206_60min_R1 1 SSITEPEGPNGPNIQK 16 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.498)S(0.498)IT(0.003)EPEGPNGPNIQK 336.37 7.214299999999997e-187 7196900.0 2267.4 2474.9 2251.8 1957.6 2606.7 2157.0 2486.9 2225.9 3058.6 2573.9 3110.5 True False 2650.081687392303 2600.861838847409 2571.139100062835 2437.212087880003 2223.25788307461 2385.2523082992793 2938.737539044991 2541.428141532855 2365.8319835805496 1992.4542023488136 2338.077004567254 1.1334449986957538 1.1123935754754122 1.0996811033341982 1.0424002644562589 0.9508916424615813 1.0201769674993049 1.2569036577086181 1.0869736696303716 1.0118708575291055 0.8521764674374315 1.0 11.191106730475985 -2.0000254830574224 0.03155000678152971 0.6797797525093514 1.6372103115380727 0.2674239420712262 0.0861073203402235 1263.1090930901862 2.969368321799623 27.772794788953796 72.2075141954876 0.009999413248133113 2.0000254830574224 0.9574305590287213 S(ph)SKELLLQPVTISR ddPTM_A549_MK2206_60min_R1 1 SSKELLLQPVTISR 14 1 F8WCF6;P59998;F8WDD7;H7C0A3;A0A0A6YYG9;P59998-3;P59998-2 F8WCF6 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 1 S(0.5)S(0.5)KELLLQPVTISR 50.787 0.006997 1488200.0 288.02 378.37 463.44 409.09 542.65 460.73 451.54 492.9 625.09 630.15 565.65 True False 336.63073458707373 397.62741685106215 529.1627606950531 509.3170683647476 462.82690384410836 509.48414279217775 533.5789731715688 562.770084442942 483.5081130636127 487.7986773418177 425.183493854193 0.7917304868436722 0.935190153424487 1.2445515132732725 1.1978759188130814 1.0885345045939725 1.1982688654581068 1.2549381170345892 1.3235934427782166 1.1371751727253572 1.1472662612558924 1.0 8.731941780536204 -5.56066022560572 5.0444743354891415 1.1240474762557422 0.8210011437344809 0.5883631872069499 0.09588903268279475 0.11531965967298563 6.975568746254847 0.016503480552202996 0.0725314293262089 2.7500448352686653e-06 5.56066022560572 -0.30304633252126134 S(ph)SKSAEDLTDGSYDDVLNAEQLQK ddPTM_A549_MK2206_60min_R1 2 SSKSAEDLTDGSYDDVLNAEQLQK 24 1 Q8N2F6-6;Q8N2F6-4;Q8N2F6-5;Q8N2F6-2 Q8N2F6-6 1 S(0.375)S(0.375)KS(0.249)AEDLTDGSYDDVLNAEQLQK;S(0.319)S(0.319)KS(0.319)AEDLT(0.035)DGS(0.004)Y(0.004)DDVLNAEQLQK 226.19 8.9562e-89 14612000.0 1599.6 1690.0 1803.7 1534.7 2162.6 1529.7 2032.6 1308.3 2976.0 3106.9 2491.3 True False 1869.5733735347665 1776.0137814263692 2059.491782033633 1910.7015688953002 1844.4844047788968 1691.5718386673204 2401.897109599441 1493.7555315007128 2301.940751695453 2405.049132164239 1872.6414536178743 0.9983616297304642 0.9484003347224723 1.099779019659514 1.0203242939025488 0.9849639936227091 0.9033079105448969 1.2826251949934486 0.797673002813663 1.2292479947232762 1.284308390972427 1.0 10.870858984240773 S(ph)SKSAEDLTDGSYDDVLNAEQLQK ddPTM_A549_PD325901_60min_R1 2 SSKSAEDLTDGSYDDVLNAEQLQK 24 1 Q8N2F6-6;Q8N2F6-4;Q8N2F6-5;Q8N2F6-2 Q8N2F6-6 1 S(0.861)S(0.085)KS(0.053)AEDLT(0.001)DGSYDDVLNAEQLQK;S(0.386)S(0.386)KS(0.227)AEDLT(0.001)DGSYDDVLNAEQLQK 243.55 1.3149999999999997e-99 38325000.0 4351.299999999999 5381.6 4992.1 4618.8 5439.0 5060.4 5005.2 5716.5 5264.6 4960.1 6421.4 True False 4793.040772742245 5835.126318726841 5330.893925935959 4904.092785944114 5056.98340353137 5019.189780170272 5195.675624950532 5602.479922992502 5043.347170139659 4646.91843950404 5631.608508608429 0.8510962303959241 1.036138486865221 0.946602363745136 0.8708156432478856 0.8979643019931709 0.8912533199880605 0.9225917634381842 0.994827661480481 0.8955429274656507 0.8251494102263679 1.0 12.459331330583257 -10.946670699119517 1.0610831081150762 1.002553650645563 0.9231678423104613 0.0 0.07281701068679823 0.6700163645932279 1.2661609704889745 0.041788250880601736 0.00853195492426304 1.1306528997143054e-11 10.946670699119517 -0.07938580833510167 S(ph)SKTFKPK ddPTM_A549_PD325901_60min_R1 1 SSKTFKPK 8 2 D6RCK3;Q9H8S9-2;Q9H8S9;Q7L9L4;Q7L9L4-2 D6RCK3 MOB1B;MOB1A MOB kinase activator 1A;MOB kinase activator 1B 1 S(0.483)S(0.483)KT(0.034)FKPK 71.016 0.0020764 23447000.0 4331.2 4550.3 4643.6 4784.5 4987.9 4915.1 4528.7 5046.6 5097.8 4731.5 5236.7 True False 4770.900235539083 4933.769750279239 4958.7426202352135 5080.027698612114 4637.567111320852 4875.0730551962115 4701.042156699731 4945.941604018885 4883.557194077031 4432.75228251716 4592.619098176376 1.038819055870211 1.0742823745688657 1.0797199842251706 1.1061286795217302 1.009787010893702 1.061501716336979 1.0236081103626486 1.0769326822646377 1.0633490584960945 0.9651904910375225 1.0 12.165101419198608 -10.836212259348045 0.6078429131910443 0.988992447495823 1.0610018254072382 0.5080581624542706 0.0280211125078786 0.9379255892956131 0.4650160123733972 0.037961807112308586 0.005375494778295834 1.458101445998872e-11 10.836212259348045 0.07200937791141515 S(ph)SLAELMAR ddPTM_A549_PD325901_60min_R1 2 SSLAELMAR 9 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.926)S(0.074)LAELMAR;S(0.899)S(0.101)LAELMAR 150.15 2.3134000000000002e-05 7941900.0 1660.25 2363.3 2392.0 2389.1 2356.6099999999997 2242.7 2345.8 2462.0 2349.8 2801.4 3038.8 True False 1828.7973577885487 2562.4635850020713 2554.3355042645007 2536.6692809602237 2191.0898434631476 2224.436194764815 2435.0707026710147 2412.893478598364 2251.046077649617 2624.519125910085 2665.0468645403325 0.6862158343710701 0.9615078890719789 0.9584580062178654 0.9518291459380204 0.8221580913328768 0.8346705734754446 0.9137065224145752 0.9053850086852187 0.844655344564786 0.9847928608050059 1.0 11.37994518749474 -10.875664722081225 1.020845413315667 1.0029746364688117 0.8791810804774347 0.25717047789066017 0.07632504166178251 0.6263595722990851 1.1120265694877203 0.058125664817043274 0.0127121177326788 1.3314819332616335e-11 10.875664722081225 -0.12379355599137698 S(ph)SLEGPTILDIEK ddPTM_A549_MK2206_60min_R1 2 SSLEGPTILDIEK 13 0 Q7L576-2;Q7L576;A0A0G2JR96;A0A0G2JQT1 Q7L576-2 CYFIP1 Cytoplasmic FMR1-interacting protein 1 1 S(0.5)S(0.5)LEGPTILDIEK;S(0.5)S(0.5)LEGPTILDIEK 100.22 0.0001548 2453860.0 2577.3900000000003 3325.31 3063.82 2858.32 4355.8 3372.3999999999996 3277.09 3082.0 5094.4 4527.8 3937.7 True False 3012.3904208644476 3494.554075452614 3498.3157463160646 3558.6085283148614 3715.0675900933684 3729.2651295820547 3872.494833659956 3518.88293822915 3940.5265340851197 3504.9668353063316 2959.8604150086703 1.0177474605185473 1.1806482689969613 1.181919163679824 1.2022893073842595 1.2551495912628994 1.2599462835044302 1.3083369790087254 1.1888678670067765 1.3313217454795336 1.184166259170051 1.0 11.531313425609847 -4.187779935537327 16.14839764795077 1.1812597594600904 1.1881834052533773 0.0 0.10019038678818638 0.0 0.0 0.017242217529919758 0.0 6.489631910271005e-05 4.187779935537327 0.006923645793286859 S(ph)SLETLEDIEENAPLRR ddPTM_A549_MK2206_60min_R1 2 SSLETLEDIEENAPLRR 17 1 Q8TDN4;Q8TDN4-2;V9GYB4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.932)S(0.055)LET(0.013)LEDIEENAPLRR;S(0.893)S(0.066)LET(0.041)LEDIEENAPLRR 65.47 0.0010195 5686900.0 404.64 459.18 316.02 244.72 783.07 544.6700000000001 136.91 570.06 885.04 485.99 599.81 True False 472.9333395018178 482.55030068364493 360.83638795712653 304.6764109858982 667.8814403265566 602.3066178773156 161.78477480825507 650.8677507355312 684.5798531184627 376.20452146528646 450.8606230861547 1.0489568511540766 1.0702870820267545 0.8003280159779544 0.6757662909224117 1.4813479069316096 1.335904239661713 0.3588354505231203 1.4436118778355973 1.5183846582841782 0.8344142340268154 1.0 8.81653770427661 S(ph)SLETLEDIEENAPLRR ddPTM_A549_PD325901_60min_R1 2 SSLETLEDIEENAPLRR 17 1 Q8TDN4;Q8TDN4-2;V9GYB4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.5)S(0.5)LETLEDIEENAPLRR;S(0.962)S(0.038)LETLEDIEENAPLRR 140.95 1.571e-16 18924100.0 1079.21 931.45 1020.16 1075.3899999999999 1343.25 1031.38 923.0 1258.8600000000001 1271.13 1175.32 1221.87 True False 1188.7706047275888 1009.9465604240594 1089.3941923204318 1141.814397912108 1248.9047539609326 1022.980783232949 958.1252700849799 1233.751049743435 1217.7088265736465 1101.1100946186336 1071.5877360720997 1.1093544324098206 0.9424767813469145 1.0166168906650626 1.0655351488973024 1.1654713019941676 0.9546402490408118 0.8941174276564455 1.1513299454748749 1.1363594277750444 1.0275501086404255 1.0 10.065534259934852 S(ph)SLGSLQTPEAVTTR ddPTM_A549_MK2206_60min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.5)S(0.5)LGSLQTPEAVTTR 259.58 2.6358e-77 17990000.0 4462.7 5745.9 4805.1 4341.9 6556.8 5108.4 5141.5 5334.5 8358.0 7905.5 8717.9 True False 5215.894657460368 6038.341767276788 5486.535433747197 5405.665694915295 5592.303405740438 5648.9674973185165 6075.643997346021 6090.681711221086 6464.9263449834025 6119.642059391802 6553.0048282002435 0.7959546489290307 0.9214615165994307 0.8372549048241815 0.8249140412124402 0.8533952823709947 0.8620423218686964 0.9271539021610445 0.9294486836039562 0.9865590693848105 0.9338680833953448 1.0 12.677940879356413 -8.19374744902952 1.0215408368876613 0.9961478274483787 0.8470675946473308 0.6900282178339995 0.035469870531840836 0.13021425193787964 0.26735077526811507 0.005493167134160851 0.007505667118342145 6.401069623371914e-09 8.19374744902952 -0.14908023280104787 S(ph)SLGSLQTPEAVTTRK ddPTM_A549_PD325901_60min_R1 1 SSLGSLQTPEAVTTRK 16 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.499)S(0.499)LGS(0.001)LQTPEAVTTRK 63.336999999999996 0.0031793000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)SLQVDWHEEEWEK ddPTM_A549_PD325901_60min_R1 2 SSLQVDWHEEEWEK 14 0 Q96PE3-2;Q96PE3-4;Q96PE3-3;Q96PE3 Q96PE3-2 INPP4A Type I inositol 3,4-bisphosphate 4-phosphatase 1 S(0.5)S(0.5)LQVDWHEEEWEK;S(0.5)S(0.5)LQVDWHEEEWEK 157.98 1.5186e-19 9424700.0 3725.0 3400.3 3511.5 3453.1000000000004 3293.3 2795.5 3271.0 3140.0 3919.1 3975.1000000000004 4701.700000000001 True False 4103.159257799933 3686.8552143538896 3749.8115063648797 3666.3901444408984 3061.9899692682197 2772.7343748450694 3395.4796949598804 3077.370236717654 3754.393856037369 3724.11150760519 4123.420706531951 0.9950862523681074 0.894125406246689 0.909393383125997 0.8891622769980599 0.7425849039409662 0.6724354782554092 0.823461862521345 0.7463148816813093 0.9105046812443847 0.9031606941551681 1.0 12.009625949444478 -9.29303348183866 1.6148997199209498 0.9733214180464175 0.8328073821109256 0.18595265110470882 0.09017538771897117 0.3079268256596825 1.6579219397228755 0.020803193266124512 0.01826069011820345 5.092916058180187e-10 9.29303348183866 -0.14051403593549183 S(ph)SLS(ph)GDEEDELFK ddPTM_A549_PD325901_60min_R1 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 2 S(0.952)S(0.049)LS(0.999)GDEEDELFK;S(0.532)S(0.532)LS(0.936)GDEEDELFK 141.88 2.9714e-12 10922000.0 7905.8 7787.5 7842.8 6982.8 8632.3 7634.0 7786.2 8208.4 7864.7 9621.4 9361.9 True False 8708.39099605764 8443.779955233622 8375.059570587635 7414.111696910577 8025.997027818315 7571.831235044637 8082.508101772123 8044.677022634766 7534.174009230967 9013.903162001607 8210.445649973719 1.060647785432392 1.0284192010041076 1.0200493283351122 0.9030096553814115 0.9775348829991957 0.9222192750364133 0.9844177096279779 0.9798100329256204 0.9176327729853596 1.0978579660935286 1.0 13.00324481599013 -6.067402149072103 6.900675702661671 0.9585959527124753 1.0398103884867993 0.20510696398404915 0.05156269531395875 0.15076806917856778 13.133029566862078 0.004923290850940449 0.013260996568442427 8.562446105367283e-07 6.067402149072103 0.08121443577432397 S(ph)SLS(ph)RERGEK ddPTM_A549_PD325901_60min_R1 1 SSLSRERGEK 10 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;H7C044 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 2 S(0.755)S(0.261)LS(0.984)RERGEK 49.298 0.024362 68058000.0 7530.9 6015.1 7206.6 7005.9 6997.4 8180.8 7532.3 7641.5 6952.3 8145.6 9556.9 True False 8295.431424044435 6522.013586995285 7695.683212806254 7438.638531446671 6505.926763719507 8114.178277135592 7818.945798332713 7489.084287859218 6660.119008274498 7631.285425863207 8381.461886180567 0.9897356256814841 0.7781474968882031 0.9181791097201037 0.8875108701158169 0.7762281630662237 0.9681101444265141 0.9328856832511121 0.8935296001533206 0.7946249829347509 0.9104957499652587 1.0 13.032986183956957 -7.3003523354926765 24.998241300331873 0.906525848791211 0.8685132276772057 0.08119352984821315 0.07393875916574683 1639.7394497019845 1053388.2655922126 0.013476511175985263 0.02154395808204701 5.0078079410979475e-08 7.3003523354926765 -0.038012621114005274 S(ph)SLSIALSSGLEK ddPTM_A549_PD325901_60min_R1 1 SSLSIALSSGLEK 13 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.5)S(0.5)LSIALSSGLEK 83.499 0.00044916 946190.0 1688.4 1848.1 1748.2 1882.4 2099.8 1848.3 1816.7 2017.4 2040.2 1930.6 1777.2 True False 1859.805125065613 2003.8458729075141 1866.8433647806028 1998.6715727594183 1952.3172919167441 1833.2480576019118 1885.835512636384 1977.1613743803152 1954.4574889866146 1808.7015865217418 1558.6156665990131 1.1932416470083431 1.285657468899962 1.1977573463342377 1.2823376638582311 1.252596989594497 1.1762027656260905 1.2099426132109803 1.268536828386046 1.2539701293079843 1.1604538728065208 1.0 10.606049507598916 -10.695991679063274 0.7617254514429338 0.9850457732880588 1.2379743733081032 0.4294362981239419 0.05858983605365345 0.21266471502561352 0.19891507816376802 0.0331868485126308 0.0069487841011957475 2.013762832513759e-11 10.695991679063274 0.25292860002004447 S(ph)SLSLAK ddPTM_A549_MK2206_60min_R1 1 SSLSLAK 7 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.639)S(0.36)LSLAK 71.223 0.020675 1684800.0 1216.4 1298.0 1281.0 1180.2 1436.2 1080.6 997.97 1171.6 1697.3 1464.4 1836.1 True False 1421.6985818752757 1364.062655793744 1462.665062252639 1469.3490529811918 1224.9368825226359 1194.9483747557729 1179.2882310670834 1337.6778878745201 1312.8642600311462 1133.5910229300305 1380.1456962179507 1.0301076080381901 0.9883468531849359 1.0597903295723186 1.0646332898096826 0.8875417181529185 0.8658132094534086 0.8544664771978189 0.9692294744969273 0.9512504829227975 0.8213560539560711 1.0 10.430604858995972 -6.745631005889909 24.998445423996987 0.9527532743305941 1.034055106106193 0.3796751853808843 0.06392097026517454 245.24751652817142 387817.93228803517 0.008625210754539316 0.01790774834837414 1.7962591528990563e-07 6.745631005889909 0.0813018317755988 S(ph)SLSSR ddPTM_A549_MK2206_60min_R1 1 SSLSSR 6 0 Q8WUM0;Q6AWC2-7;Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6 Q8WUM0;Q6AWC2-7 NUP133;WWC2 Nuclear pore complex protein Nup133;Protein WWC2 1 S(0.911)S(0.089)LSSR 85.212 0.040050999999999996 6657700.0 2101.5 2225.0 1505.5 1784.4 1949.2 2443.6 1923.7 1744.0 2533.6 2857.2 2610.6 True False 2456.1818232578826 2338.242996256609 1719.0025380338386 2221.5780801047586 1662.4752620896259 2702.1801300695965 2273.2113892238717 1991.2173407760017 1959.743645327824 2211.75653558842 1962.3159711053756 1.2516749898714383 1.1915731363789863 0.8760070056737712 1.1321204703100594 0.8472005969319767 1.3770362010290598 1.1584329041277528 1.014728193673288 0.9986891378272263 1.127115392299709 1.0 10.938341646935068 -8.365646777466166 6.029158198960175 0.9998775686621301 1.112331293309631 0.05054546147229666 0.14792297136126592 0.3833884789481615 18.892503747262758 0.022792325054595993 0.027588577416863137 4.308769109564936e-09 8.365646777466166 0.11245372464750092 S(ph)SLVTSK ddPTM_A549_MK2206_60min_R1 2 SSLVTSK 7 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.747)S(0.235)LVT(0.018)SK;S(0.499)S(0.499)LVT(0.002)SK 87.913 0.01285 16077500.0 5176.0 7205.8 6616.9 6951.5 8114.1 6636.1 4576.799999999999 6470.3 8713.7 10062.7 7635.9 True False 6049.5822589497075 7572.544441539717 7555.275917579619 8654.617812064693 6920.526638683273 7338.327697313328 5408.345316941215 7387.484839462703 6740.06086291958 7789.529081151329 5739.695289881079 1.053990142928833 1.3193286505800925 1.316320037215104 1.5078531829594752 1.2057306684701479 1.2785221735116485 0.942270459283087 1.2870865902039488 1.1742889687545117 1.3571328594540635 1.0 12.486758433506228 -7.646713106271874 9.455245270862303 1.0935342039745137 1.2918124962229969 0.09486162060250314 0.15288923568182217 0.2560545734785035 20.256210845072054 0.020695683825800976 0.030702930151608358 2.255728848283499e-08 7.646713106271874 0.19827829224848315 S(ph)SLVTSK ddPTM_A549_PD325901_60min_R1 1 SSLVTSK 7 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.913)S(0.085)LVT(0.003)SK 91.087 0.012447 23240000.0 8406.9 8291.6 8135.8 7415.2 10482.0 10602.0 9883.7 9920.8 11081.0 9379.4 8837.8 True False 9260.362299167316 8990.362231372728 8687.944312539774 7873.220062858927 9745.780480936903 10515.66082708189 10259.82961206817 9722.921861282955 10615.30410521551 8787.18308330158 7750.806627430086 1.1947611060757104 1.1599260133204534 1.1209084073641007 1.0157936381738153 1.2573891917838085 1.356718253022465 1.3237112090706349 1.2544399994283895 1.3695741121508531 1.1337120774247882 1.0 12.920130744318255 -4.089316353822518 11.316901164251746 1.1940032346097402 1.2727839510611672 0.0 0.12110531671032718 0.0 0.0 0.020420892800020272 0.0 8.14111043772793e-05 4.089316353822518 0.07878071645142692 S(ph)SLYEGLEKPESR ddPTM_A549_MK2206_60min_R1 1 SSLYEGLEKPESR 13 1 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6;Q01814-6;Q01814;Q01814-8;A0A2R8Y4R4;Q01814-5 P20020-6 ATP2B1;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 1 S(0.888)S(0.112)LYEGLEKPESR 225.7 1.1120999999999998e-46 29481000.0 2149.6 3346.8 2751.0 2139.9 3187.0 2544.7 2310.6 3261.8 3207.4 3239.3 3098.1 True False 2512.3999273257905 3517.1378246614036 3141.1331664769777 2664.175596063762 2718.1965217933707 2813.9784649648495 2730.4061111091532 3724.1701388435563 2480.9290211653224 2507.5398802084455 2328.756266789842 1.0788591159817247 1.5103074009156523 1.3488458243880481 1.1440336775717155 1.1672310067641243 1.2083610917530152 1.1724739725007718 1.59920992675514 1.0653450756292535 1.0767721448432448 1.0 11.185343936192698 -8.969374012258752 24.99935419610128 1.0288284872160136 1.2782429891242941 0.3178432767959999 0.15110152982739533 138.83750561621466 113331.01883020614 0.02533837215730865 0.02670498519268208 1.0730648961254e-09 8.969374012258752 0.24941450190828052 S(ph)SLYFPR ddPTM_A549_MK2206_60min_R1 1 SSLYFPR 7 0 B8ZZW8;E7ENZ2;E9PG19;O94868-2;O94868 B8ZZW8 FCHSD2 F-BAR and double SH3 domains protein 2 1 S(0.57)S(0.43)LYFPR 103.74 0.010293 4551600.0 738.0 844.5 772.96 572.25 1167.3 938.93 1025.9 902.67 1131.5 862.98 1348.4 True False 862.556357632319 887.481442848857 882.5773509124127 712.4512756892786 995.59171631296 1038.286949388708 1212.2927505353075 1030.626236810936 875.217056634209 668.0322186343601 1013.555066053202 0.851020715619454 0.8756124581417392 0.8707739524692838 0.7029231065496758 0.9822768882107298 1.0244011244813884 1.19607980970979 1.0168428646153478 0.8635120931735034 0.659098100348595 1.0 9.985208756657594 -6.804555798520806 24.999720711650635 0.9699874318815518 0.831955254704671 0.205441254482984 0.12994428216301623 137.160365294192 79527.79233261949 0.015375507989681833 0.0290571150653438 1.56835438124327e-07 6.804555798520806 -0.13803217717688077 S(ph)SLYFPR ddPTM_A549_PD325901_60min_R1 1 SSLYFPR 7 0 B8ZZW8;E7ENZ2;E9PG19;O94868-2;O94868 B8ZZW8 FCHSD2 F-BAR and double SH3 domains protein 2 1 S(0.5)S(0.5)LYFPR 118.06 0.0069282 8855900.0 2197.5 2382.2 2516.2 2769.4 3141.4 2728.1 2612.4 3178.2 3325.2 2731.4 2909.0 True False 2420.588582286002 2582.956354331626 2686.9644631397746 2940.4595482362597 2920.7589012416697 2705.8832580986714 2711.8163115601337 3114.8083077503306 3185.453407694485 2558.938937856361 2551.2114416703416 0.9487996732647068 1.0124430739619528 1.0532111996881577 1.152573832261848 1.1448517569086223 1.0606268119929183 1.0629523947982298 1.2209134283714986 1.2486042339199017 1.0030289516814648 1.0 11.316966757576582 -5.778982628796611 1.7855259263351426 1.1229448786730676 0.954804503218278 0.30153218710713414 0.07691608838918762 0.4462782655845734 2.5130848273912703 0.013792631484027072 0.09014783717800227 1.6634791860011091e-06 5.778982628796611 -0.16814037545478955 S(ph)SLYGIAK ddPTM_A549_MK2206_60min_R1 2 SSLYGIAK 8 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.94)S(0.06)LYGIAK;S(0.864)S(0.136)LYGIAK 162.49 0.00017781 40520000.0 12175.6 12389.3 10656.6 12968.900000000001 14393.6 10613.599999999999 10496.5 10303.599999999999 14787.099999999999 15515.0 15902.5 True False 14230.543615159984 13019.862451021123 12167.866122093263 16146.281082196048 12276.320507086626 11736.724107262511 12403.578181103274 11764.16685345161 11437.845460146445 12010.150724364523 11953.47036332768 1.1904947419134604 1.089211923841385 1.0179358589806131 1.3507609582344877 1.0270089048574065 0.9818675037895163 1.0376549909017627 0.984163301190185 0.9568639995324595 1.0047417494095048 1.0 13.54514190563136 -6.980948053381521 24.999955609565564 0.9853060661514883 1.1518830384288374 0.5028018181904957 0.07808442650760054 144.65221785395116 189811.6605528051 0.010565741400329103 0.019965425418137867 1.0448451872567186e-07 6.980948053381521 0.16657697227734913 S(ph)SLYGIAK ddPTM_A549_PD325901_60min_R1 1 SSLYGIAK 8 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.883)S(0.117)LYGIAK 178.55 1.3372999999999999e-06 32441000.0 10782.0 10600.0 10620.0 10462.0 11959.0 11419.0 10334.0 10571.0 11669.0 11687.0 12250.0 True False 11876.580702711111 11493.299200703237 11340.737063247914 11108.213979074073 11119.041096310284 11326.007449957388 10727.266024981787 10360.15311221093 11178.592510040588 10949.080825484109 10743.32765914804 1.105484360108676 1.0698081232695709 1.0556074824350326 1.0339639943509802 1.034971793571084 1.054236434864126 0.9985049665545128 0.9643337186490041 1.040514900476103 1.0191517165690154 1.0 13.39115330525357 -2.0000000000003824 0.36422066266290765 1.0131882529037586 2.228346203606651 0.6533063925794387 0.021598555312516643 29.058527966983448 0.3528352781027388 0.006025519700249109 24.936454463385214 0.009999999999991196 2.0000000000003824 1.2151579507028922 S(ph)SMEMEGIFNHK ddPTM_A549_MK2206_60min_R1 10 SSMEMEGIFNHK 12 0 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2 E7EPJ7 TRIO Triple functional domain protein 1 S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.832)S(0.168)MEMEGIFNHK;S(0.849)S(0.151)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK 155.39 2.9547e-14 62740900.0 9906.18 12152.419999999998 10124.43 9568.529999999999 13689.6 11227.14 10440.550000000001 10848.609999999999 15585.519999999999 14597.54 14697.25 True False 11578.10100115193 12770.92627081741 11560.226413912953 11912.820279547628 11675.877974503459 12415.188502827617 12337.46279033181 12386.433689974738 12055.424604961203 11299.945575568167 11047.517201535466 1.0480274246183314 1.1559996728534092 1.0464094513748508 1.0783255696485268 1.056878008108524 1.1237989745878887 1.1167633926487173 1.1211961442570264 1.091233838792815 1.022849330707321 1.0 13.431434556994274 -10.46414706342228 0.8215928488857932 1.000535423082232 1.0941998823526895 0.46043077516656017 0.03372858781783408 0.3748064027652012 0.4605557089519196 0.02072810752790115 0.006193229247599264 3.434416299263978e-11 10.46414706342228 0.09366445927045741 S(ph)SMEMEGIFNHK ddPTM_A549_PD325901_60min_R1 7 SSMEMEGIFNHK 12 0 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2 E7EPJ7 TRIO Triple functional domain protein 1 S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.837)S(0.163)MEMEGIFNHK;S(0.862)S(0.138)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK 177.36 1.2159e-16 111071600.0 12045.009999999998 12209.039999999999 12457.38 13173.310000000001 14809.9 14303.150000000001 12076.21 12996.18 13908.109999999999 14577.52 15041.52 True False 13267.810548132296 13237.938648429605 13302.812719111422 13986.995439942299 13769.70371538136 14186.669888594264 12535.77677990567 12736.960994594014 13323.600503455358 13657.092899384876 13191.508396051311 1.005784187053531 1.0035197076016107 1.0084375736055649 1.0603029630886718 1.0438308722528746 1.0754395526777545 0.9502913846954814 0.9655424241254048 1.0100134194997432 1.035294258196654 1.0 13.687321919960048 -7.757378280331033 24.99999981450236 0.9975746694959046 1.032183432434847 0.30966593041282986 0.029733682578892896 117.16431611722649 721256.4248246397 0.004555653681204549 0.006623654211372066 1.7483231961172823e-08 7.757378280331033 0.03460876293894233 S(ph)SPAFGDRR ddPTM_A549_MK2206_60min_R1 1 SSPAFGDRR 9 1 P13716;P13716-2 P13716 ALAD Delta-aminolevulinic acid dehydratase 1 S(0.5)S(0.5)PAFGDRR 93.561 0.00040698 15501000.0 1036.5 1126.5 767.95 740.53 1106.4 692.88 909.11 742.46 1314.2 1327.6 1348.1 True False 1211.435860007993 1183.83403832947 876.856857577607 921.9598832436553 943.6500256392171 766.2001017034795 1074.283519289553 847.7059786883881 1016.5357983461573 1027.6942379417558 1013.3295643327801 1.1955003610357056 1.1682616199093703 0.8653224858340804 0.9098322161859685 0.9312370415843506 0.7561213337419783 1.060152152964083 0.8365550641429812 1.0031640584921533 1.014175717470983 1.0 9.9848877416277 -5.703738224942152 8.706105649523813 0.9605259074454697 1.1840487432475615 0.5250532270403435 0.08850494623196449 0.19085795431468341 26.11814032027794 0.012271965450902152 0.047645042022939794 1.978161636246349e-06 5.703738224942152 0.22352283580209176 S(ph)SPAFGDRR ddPTM_A549_PD325901_60min_R1 2 SSPAFGDRR 9 1 P13716;P13716-2 P13716 ALAD Delta-aminolevulinic acid dehydratase 1 S(0.5)S(0.5)PAFGDRR;S(0.5)S(0.5)PAFGDRR 141.1 1.6774000000000002e-05 38714000.0 4774.5 4761.5 4070.8 4225.1 4558.5 4074.3999999999996 3954.0 3995.3 4486.200000000001 5435.0 5709.1 True False 5259.203725198871 5162.768315485704 4347.068967709002 4486.074831101691 4238.326685971273 4041.219437263012 4104.47163371182 3915.610607247783 4297.660615180742 5091.833172457099 5006.916892966701 1.0503876612345138 1.0311272237687688 0.8682127266412993 0.8959754929032984 0.8464943150793895 0.8071273247893888 0.819760287908401 0.7820402636896382 0.8583447073423042 1.016959794081999 1.0 12.289706793788596 -5.747615678964599 15.680364624958813 0.8943407199670677 1.0407754415334736 0.42154924774963165 0.07162715956336645 2.5874508744868967 2926.8229755872153 0.011518337400197575 0.04325082232304861 1.7880691943823989e-06 5.747615678964599 0.1464347215664059 S(ph)SPAPHSGPCPSR ddPTM_A549_PD325901_60min_R1 2 SSPAPHSGPCPSR 13 0 P85299-2;P85299-4;P85299-3;P85299;P85299-5 P85299-2 PRR5 Proline-rich protein 5 1 S(0.5)S(0.5)PAPHSGPCPSR;S(0.5)S(0.5)PAPHSGPCPSR 88.507 1.4164e-06 3318900.0 555.57 729.78 563.97 753.25 576.23 658.04 397.6 607.99 626.88 827.72 874.45 True False 611.9710574109826 791.2811217631323 602.2443956271113 799.7765417451293 535.7575926855819 652.6811404124667 412.73088557506816 595.863162491072 600.5344136339226 775.4576179404213 766.8981935952658 0.7979821344238989 1.0317942177612363 0.7852990144672954 1.0428718549925484 0.6986032789749022 0.8510662117388196 0.5381821068584872 0.7769781797211296 0.7830692765340604 1.0111610959794135 1.0 9.582891261187756 -4.300456264744536 15.788599745619932 0.8586525418548145 0.8318589152503775 0.0 0.15284351673232754 0.0 0.0 0.020068413419957652 0.0 5.0066096862613983e-05 4.300456264744536 -0.02679362660443707 S(ph)SPATSLFVELDEEEVK ddPTM_A549_PD325901_60min_R1 1 SSPATSLFVELDEEEVK 17 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.5)S(0.5)PATSLFVELDEEEVK 201.24 2.7114999999999996e-48 23786000.0 3045.0 3282.4 3191.3 3265.7 3882.2 2946.6 3796.6 3072.5 3713.7 2885.4 3303.8 True False 3354.126158389476 3559.019367583804 3407.880808845862 3467.4148720571798 3609.52766486293 2922.6038665421156 3941.0816905792362 3011.2165771703776 3557.626103739628 2703.215351574555 2897.4535445137394 1.1576117120981753 1.2283266367886119 1.17616408908388 1.1967111185001218 1.2457585978203123 1.0086801467709456 1.3601880513465288 1.0392631084187858 1.2278457787445496 0.9329624479029284 1.0 11.50056981504416 -10.888407306285316 0.8516804316192756 0.9850866823943332 1.1856632831038405 0.430183287347942 0.0937797041391672 0.5941867053976092 0.6658155968936661 0.08255809508592131 0.014700072249288711 1.2929826393220249e-11 10.888407306285316 0.20057660070950734 S(ph)SPAVSR ddPTM_A549_MK2206_60min_R1 2 SSPAVSR 7 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.5)S(0.5)PAVSR;S(0.614)S(0.386)PAVSR 80.219 0.015967 6039900.0 1658.52 1383.87 1067.49 985.96 1953.22 1777.85 1829.21 1756.99 1895.1 2039.2599999999998 2469.3999999999996 True False 1938.4376290790701 1454.303072013318 1218.8761337268306 1227.520244261426 1665.903925414888 1965.9809069586809 2161.553779322243 2006.0487130562074 1465.86287585284 1578.589749672421 1856.179828027125 1.044315642164571 0.783492552851978 0.6566584311081193 0.661315367038612 0.8974905880673881 1.0591543326102515 1.1645174388193251 1.0807404987200908 0.7897202920316505 0.8504508700270998 1.0 10.858120771224188 -6.977893616795918 17.58761787370551 0.9466020651960761 0.7772655254920237 0.2918359121432039 0.1395452277226156 10.55781453876664 8397.144606333706 0.022855584194438186 0.0431730304524182 1.0522195901589308e-07 6.977893616795918 -0.1693365397040525 S(ph)SPEIQEPIKPLEK ddPTM_A549_PD325901_60min_R1 2 SSPEIQEPIKPLEK 14 1 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 S(0.5)S(0.5)PEIQEPIKPLEK;S(0.5)S(0.5)PEIQEPIKPLEK 90.385 1.9262e-05 7834400.0 3452.8999999999996 4260.4 3664.5 3902.1 4338.4 4157.4 4034.0 4169.1 4887.2 4013.4 4946.2 True False 3803.4358661093684 4619.438859875099 3913.195006428623 4143.123854687912 4033.685750667492 4123.543512781576 4187.516077489503 4085.944029904321 4681.807979695803 3759.993239068871 4337.848756545149 0.8768023228957825 1.0649146890852463 0.9021049893738715 0.9551102602267019 0.9298816019302837 0.9505964232984797 0.9653439556119109 0.9419286515555108 1.079292580828613 0.8667875368857934 1.0 12.082764037537169 -8.747546176549179 24.986032333017764 1.0374437189043277 0.9509333424474803 0.0 0.06999853817872552 167.53208134812877 301295.3835539052 0.008097266715621228 0.009159099056001966 1.7883553713380282e-09 8.747546176549179 -0.08651037645684745 S(ph)SPELLPSGVTDENEVTTAVTEK ddPTM_A549_MK2206_60min_R1 1 SSPELLPSGVTDENEVTTAVTEK 23 0 B1AUU8;P42566-2;P42566 B1AUU8 EPS15 Epidermal growth factor receptor substrate 15 1 S(0.499)S(0.499)PELLPS(0.002)GVTDENEVTTAVTEK 69.398 0.00011818 2181000.0 411.67 694.01 590.58 596.61 925.84 538.57 677.68 731.25 927.2 752.48 1068.4 True False 481.14983163481975 729.3321446436177 674.3331244849053 742.7794767828409 789.6501624528319 595.5611199261674 800.8056839679961 834.9069268592038 717.1906804341485 582.4942453799431 803.0867936600716 0.5991255682863085 0.9081610485956109 0.8396765204065043 0.9249056050313318 0.9832687683158102 0.7415899808436582 0.9971595726513203 1.03962228422922 0.8930425529294894 0.7253191684615096 1.0 9.649412105308492 -4.7609501679542 1.1710454681456153 0.9428444970733113 2.8466050370423826e-29 0.3801801987325856 0.10368125023437912 2.3557392141147364 1.1792561873054486 0.011740461804278114 3.6099445436017485 1.7340029502180392e-05 4.7609501679542 -0.9428444970733113 S(ph)SPELTR ddPTM_A549_MK2206_60min_R1 1 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.99)S(0.01)PELTR 139.74 0.0054536 148860000.0 3275.6 3547.4 3150.7 2711.5 4337.4 3735.7 3390.3 3631.6 5322.1 4645.7 5315.8 True False 3828.4411992688656 3727.9475078295286 3597.516636720835 3375.8176217238592 3699.3742057190375 4131.0092944430335 4006.2736252459804 4146.390421308559 4116.652847647303 3596.233143421222 3995.740151383574 0.9581306727223543 0.9329804658440267 0.9003379850602024 0.8448541431191268 0.9258295248348629 1.0338533382889328 1.0026361758931595 1.037702719450568 1.0302604002469635 0.9000167696530472 1.0 11.964247050350076 -7.1911587250436595 5.18987635090245 1.0168053061425433 0.9077863214877209 0.4696907970250509 0.04508344327996957 0.08153036364683312 4.191633277929034 0.004382749888515923 0.007649498279499941 6.439338788891928e-08 7.1911587250436595 -0.1090189846548224 S(ph)SPELTR ddPTM_A549_PD325901_60min_R1 1 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.985)S(0.015)PELTR 161.86 0.00091462 220700000.0 4579.5 5505.9 5386.2 4632.1 6479.7 4692.5 4791.3 5129.2 4585.2 4343.0 4309.1 True False 5044.40746875028 5969.9015159577275 5751.7399218517785 4918.214296737623 6024.588225751465 4654.285835793419 4973.635543399959 5026.894082220442 4392.499989462514 4068.782238818985 3779.1080176354976 1.3348143120572804 1.5797117965664713 1.5219834667362888 1.3014219952926454 1.5941825948444082 1.2315831709688734 1.3160871613592697 1.3301800474508945 1.1623113096965145 1.0766514796168039 1.0 11.883830040169174 -8.608182231693092 0.4204985497670935 0.9986894748882528 1.4965007047711165 0.6858523390655924 0.1038933126346579 0.31949256181391095 0.14379599859651002 0.04625428902441203 0.04932159701268549 2.465004794377963e-09 8.608182231693092 0.49781122988286375 S(ph)SPEQPIGQGR ddPTM_A549_MK2206_60min_R1 2 SSPEQPIGQGR 11 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 S(0.878)S(0.122)PEQPIGQGR;S(0.97)S(0.03)PEQPIGQGR 202.03 3.8135e-24 196488000.0 2333.6 1957.4699999999998 2183.3 2248.8900000000003 2794.3999999999996 2517.3999999999996 2094.1800000000003 2237.12 3486.4 2836.8 3083.0 True False 2727.454628957696 2057.0968619696287 2492.924770036055 2799.868150956509 2383.347461719296 2783.7895970851223 2474.665398495008 2554.2386108926644 2696.7359666367697 2195.964909756834 2317.4060135286413 1.1769429323283263 0.8876721860393173 1.075739320379236 1.20819059526528 1.028454853316898 1.2012524265639293 1.067860091864918 1.1021972826433661 1.1636873085224002 0.9475961039788221 1.0 11.17829511366792 -4.92751389623545 21.211931973066076 1.0819512312940591 4.452394066051187 0.0793313021208365 0.09670503588052227 1462.135972862441 418498.41240323667 0.012278811259986182 5124.560467857018 1.1816425026120667e-05 4.92751389623545 3.3704428347571276 S(ph)SPEQPIGQGR ddPTM_A549_PD325901_60min_R1 2 SSPEQPIGQGR 11 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 S(0.883)S(0.117)PEQPIGQGR;S(0.993)S(0.007)PEQPIGQGR 234.63 3.5737e-42 225010000.0 2743.18 2978.0 3060.3 3176.0 3576.4 3266.06 3047.8 3099.3 3213.1000000000004 3083.5 3521.5 True False 3021.665614177618 3228.96651129191 3267.9903610788692 3372.1743067806588 3325.206001910201 3239.4622902187434 3163.7856968201554 3037.4820301461855 3078.0645808562354 2888.8072837665986 3088.3778246277434 0.9783989478495344 1.0455218547235594 1.0581575657676454 1.0918917626884341 1.0766836801488184 1.0489203310508846 1.0244166602904232 0.9835202176120752 0.9966606275665928 0.9353801405806946 1.0 11.592633543865613 -7.950057292356184 3.0470790778735117 0.9973254556190229 1.053295992621141 0.47429375542775964 0.032774865155065655 0.16850601752194375 3.2073792716077403 0.004382598373304755 0.006111066275726691 1.1218704468009135e-08 7.950057292356184 0.05597053700211807 S(ph)SPEQPR ddPTM_A549_MK2206_60min_R1 2 SSPEQPR 7 0 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 1 S(0.654)S(0.346)PEQPR;S(0.5)S(0.5)PEQPR 91.064 0.01245 4540900.0 1544.18 1352.11 1264.06 972.18 1238.77 1283.5700000000002 810.38 815.54 1437.55 2375.5 2339.4300000000003 True False 1804.7998324236778 1420.9266236712465 1443.3227155277684 1210.3641436428181 1056.5485739886958 1419.3965254351924 957.615556271374 931.1452924865021 1111.947220295632 1838.872900143599 1758.484966016643 1.0263379370890775 0.8080402455131358 0.8207762610545447 0.6882993980804739 0.6008288921468642 0.8071701225006428 0.5445685205035246 0.5295156401568515 0.6323325145135804 1.045714314128629 1.0 10.780117285507622 -3.5227748838607074 17.021033154012365 0.774379344005126 99.1480050627964 0.0 0.1816213620466957 0.0 0.0 0.025472596493015934 0.0 0.0003000717535065481 3.5227748838607074 98.37362571879127 S(ph)SPEQPR ddPTM_A549_PD325901_60min_R1 2 SSPEQPR 7 0 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 1 S(0.586)S(0.414)PEQPR;S(0.624)S(0.376)PEQPR 99.13600000000001 0.011426 10866400.0 2457.6000000000004 2487.4 2264.0 2025.38 2253.3 1582.24 1745.72 1917.73 2456.2 2705.1000000000004 3049.4 True False 2707.093742810503 2697.0219275310596 2417.6486545379726 2150.4831226282777 2095.0359814629956 1569.3547620300008 1812.1543298946385 1879.4793707199176 2352.974455665582 2534.299524344745 2674.3431317392683 1.0122462262536727 1.0084801368689895 0.904015878084293 0.8041163817410758 0.7833833873443463 0.5868187755732621 0.6776072630276496 0.7027816843748064 0.8798326690918367 0.9476343907659128 1.0 11.384968867034095 -5.8450576620565275 3.661531482271474 0.8614398494768184 1.0128818787516236 0.2024719475397222 0.12465193557154942 0.37478157891233027 9.655772998211102 0.02203732392640194 0.08073969773422995 1.428704254293914e-06 5.8450576620565275 0.1514420292748052 S(ph)SPEQPRPSTSK ddPTM_A549_MK2206_60min_R1 6 SSPEQPRPSTSK 12 1 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 1 S(0.578)S(0.422)PEQPRPSTSK;S(0.635)S(0.365)PEQPRPSTSK;S(0.569)S(0.431)PEQPRPSTSK;S(0.5)S(0.5)PEQPRPSTSK;S(0.5)S(0.5)PEQPRPSTSK;S(0.5)S(0.5)PEQPRPSTSK 161.25 4.1585e-14 503195900.0 18944.07 21415.9 19842.500000000004 19136.59 26471.57 21200.199999999997 21125.1 21123.41 28576.239999999998 30922.93 31188.059999999998 True False 22141.36587795622 22505.87783529524 22656.464869436382 23825.055409074168 22577.637119676747 23443.591092446182 24963.257222276443 24117.718055230052 22103.76726687826 23937.418636092396 23443.203955333163 0.944468423349583 0.9600171494551756 0.9664406329699741 1.0162883646138368 0.9630781339741104 1.000016513831205 1.0648398260681207 1.0287722659915453 0.9428646062625672 1.0210813625006578 1.0 14.516882134232466 -6.019687700749789 12.455531658460217 0.9867243918060108 0.9549773908353958 0.16294102662106436 0.034239880551389774 2.2189536667041114 1407.2939861821058 0.005415251534934355 0.014861885861216322 9.556795639580537e-07 6.019687700749789 -0.031747000970615 S(ph)SPEQPRPSTSK ddPTM_A549_PD325901_60min_R1 3 SSPEQPRPSTSK 12 1 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 1 S(0.587)S(0.413)PEQPRPSTSK;S(0.589)S(0.411)PEQPRPSTSK;S(0.642)S(0.358)PEQPRPSTSK 171.62 8.627900000000001e-16 741853000.0 29092.9 27591.600000000002 33201.6 31417.1 36695.7 33341.4 35592.2 33951.6 35697.7 35811.0 36597.7 True False 32046.38979093899 29916.84096472864 35454.86023343992 33357.662913589 34118.320625292516 33069.87869270594 36946.68064779918 33274.40870348505 34197.4498110957 33549.887348456505 32096.41491193488 0.9984414109447068 0.9320929158852636 1.1046361511315153 1.039295603733772 1.0629947524951082 1.0303293618132126 1.1511154983873526 1.0367017249366421 1.0654601115085773 1.0452845727633324 1.0 14.970124540522507 -5.750240683518738 24.999985516935222 1.046232305333776 0.9652671594746098 0.39547643656729115 0.0424193749926346 191.76822156026316 428095.05465848703 0.006184989970032961 0.02352427647681133 1.7772941707896079e-06 5.750240683518738 -0.08096514585916625 S(ph)SPESDR ddPTM_A549_MK2206_60min_R1 1 SSPESDR 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.744)S(0.256)PESDR 116.37 0.0071396 5855400.0 1280.2 918.7 721.06 364.49 123.44 0.0 0.0 70.785 0.0 1279.8 1533.4 True False 1496.2664621150345 965.4579059150321 823.3171504979613 453.79006636257805 105.2821395199792 0.0 0.0 80.81899051997088 0.0 990.6922911402975 1152.614460312948 1.2981500003989026 0.8376243220589991 0.7143040269288494 0.39370499155404387 0.09134202558190524 0.0 0.0 0.07011797379153789 0.0 0.8595174928408525 1.0 10.170694309179103 -10.99352743196443 1.3049559421989907 0.9955849939293926 0.3248278512584962 0.20485721798561862 0.4063506265485842 0.5272826722495777 1.6149630837411022 0.30697373279090084 0.07219594824884232 1.015015251685603e-11 10.99352743196443 -0.6707571426708964 S(ph)SPESDR ddPTM_A549_PD325901_60min_R1 1 SSPESDR 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.691)S(0.308)PES(0.001)DR 136.27 0.0055473 8130800.0 1151.9 1294.0 755.33 833.46 960.61 929.84 657.63 696.39 1159.1 1182.8 1770.1 True False 1268.8400400160394 1403.049921293395 806.5912359682716 884.9409312750025 893.1400675245942 922.2676913274694 682.6564695189442 682.4999551426135 1110.3870578788271 1108.1178061420887 1552.3889215884042 0.8173467501415576 0.9038005243285262 0.5195806442260407 0.5700510477551792 0.5753326728270731 0.5940957697532427 0.4397457750603181 0.43964495343362775 0.7152763347104276 0.71381455428596 1.0 10.60027432733863 -9.89877146959275 0.9370781934510428 0.9639650731316353 0.6115715755500071 0.20240636013665037 0.15748778870252386 0.315906562223502 0.5674933174203572 0.055002176630741494 0.030068515569064203 1.2624916964815439e-10 9.89877146959275 -0.3523934975816282 S(ph)SPFKVSPLTFGR ddPTM_A549_PD325901_60min_R1 2 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 1 S(0.885)S(0.115)PFKVSPLTFGR;S(0.617)S(0.383)PFKVSPLTFGR 197.47 6.093899999999999e-31 353630000.0 9887.0 10379.5 12431.3 12118.2 11245.5 17957.2 14425.1 16376.5 14552.099999999999 13248.0 14107.3 True False 10890.72096157529 11254.216891858412 13274.96277347963 12866.713691570962 10455.654874868913 17810.962516890693 14974.0550742176 16049.857860384272 13940.525843290912 12411.519019082169 12372.19153354279 0.8802580312508889 0.9096381074724403 1.072967771109047 1.039970457674168 0.8450931952130009 1.4395964101107401 1.2102993260022514 1.297252618250437 1.1267628540583245 1.0031787000251942 1.0 13.594813452582754 -5.737499070637979 0.9450175402633697 1.1059499575357443 0.8304501296648393 0.24781733588941723 0.15100190762117757 1.4386833322861783 1.5156536252742443 0.024447466718774676 0.33988126983760597 1.8302100228376e-06 5.737499070637979 -0.275499827870905 S(ph)SPGAVAGLSNAPGTPR ddPTM_A549_PD325901_60min_R1 1 SSPGAVAGLSNAPGTPR 17 0 V9GYB2;U3KPY3;Q9BWG4-2;Q9BWG4 V9GYB2 SSBP4 Single-stranded DNA-binding protein 4 1 S(0.807)S(0.193)PGAVAGLSNAPGTPR 193.72 1.8629e-40 19995000.0 9368.0 9807.1 10830.0 9764.8 12374.0 10109.0 10654.0 10261.0 10114.0 11324.0 10662.0 True False 10319.032463642901 10633.578735020448 11564.988926080501 10367.949518530162 11504.892927982562 10026.675655628267 11059.443800092498 10056.336305401219 9688.943752382416 10609.000707434072 9350.64159198665 1.1035641097062416 1.1372031138626095 1.2368123419457666 1.1087955213057603 1.2303854034831225 1.0722981473507622 1.1827470544449339 1.0754701916945826 1.0361795666177265 1.1345746281758693 1.0 13.190849643226109 -8.571068033492809 1.2787071269780543 1.0122008648467842 1.1571558917061258 0.2654311307637168 0.061346084016243786 0.18014567676542917 0.5725251371448301 0.008888327141648934 0.010227760537482188 2.6849238115941355e-09 8.571068033492809 0.14495502685934158 S(ph)SPGEIVEER ddPTM_A549_MK2206_60min_R1 1 SSPGEIVEER 10 0 H0YA93;Q86UW6-2;Q86UW6 H0YA93 N4BP2 NEDD4-binding protein 2 1 S(0.5)S(0.5)PGEIVEER 47.559 0.032922 3190900.0 489.61 458.48 500.34 419.13 798.87 723.17 652.67 461.22 1102.0 871.9 1063.9 True False 572.2441981847693 481.8146736735866 571.2957355561947 521.8168688154607 681.3572812566899 799.6953693986052 771.2516907026793 526.5993474270108 852.3987595323894 674.9371844391512 799.704267853754 0.7155697689604159 0.6024910620605798 0.7143837522456119 0.6525122970969163 0.8520115605801584 0.9999888728177321 0.9644211262903026 0.658492606073365 1.0658924727512795 0.8439834718533482 1.0 9.643322777050567 -7.05030300891565 0.5145450317614995 1.025182327802877 0.6031513331667239 0.36772360443992513 0.12480756481383905 0.5878060850624787 0.26641086433182015 0.027317506959831317 0.10971510790432033 8.906293258324174e-08 7.05030300891565 -0.42203099463615323 S(ph)SPGGQDEGGFMAQGK ddPTM_A549_MK2206_60min_R1 2 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.834)S(0.166)PGGQDEGGFMAQGK;S(0.5)S(0.5)PGGQDEGGFMAQGK 144.4 8.8709e-15 25937000.0 5212.799999999999 5363.5 5180.4 4810.0 7585.700000000001 6598.0 5527.4 6859.7 8254.0 7025.9 7182.3 True False 6092.593199276083 5636.479240639248 5915.058617091004 5988.450215929102 6469.8535787160245 7296.195980602068 6531.657032175513 7832.083481950195 6384.482178929527 5438.744310300529 5398.736688604207 1.1285220137030365 1.044036700759434 1.0956375460163972 1.1092317631585324 1.1984013949731533 1.3514635740622554 1.209849157111645 1.4507252221584281 1.1825881770463185 1.0074105525058799 1.0 12.398406138917561 -4.161697557108592 16.246338125234818 1.1398460979542966 1.1336576804797132 0.0 0.1351360379669185 0.0 0.0 0.01954611148443194 0.0 6.891320411709975e-05 4.161697557108592 -0.00618841747458343 S(ph)SPGGQDEGGFMAQGK ddPTM_A549_PD325901_60min_R1 1 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.805)S(0.195)PGGQDEGGFMAQGK 150.35 3.3770000000000002e-15 45432000.0 7745.7 7049.9 8759.3 7581.3 9694.2 7081.2 8807.6 8434.4 8345.5 8635.9 9063.6 True False 8532.03776191704 7644.019814626205 9353.758771949855 8049.579682618453 9013.31283517444 7023.5330549643795 9142.778037703656 8266.169275341199 7994.767657258003 8090.627800188085 7948.834658894221 1.0733696356824145 0.9616528890902329 1.1767459223074437 1.0126741878586574 1.1339162558991132 0.8835927977323706 1.1502035744917012 1.0399221558963867 1.0057785826897765 1.0178382300524023 1.0 12.956527653855689 -8.705994597546987 4.580254598906879 1.0026101932330647 1.0543875555760953 0.06249838153539533 0.08014524142514362 0.38329150564350595 16.538798303869562 0.012365663996742484 0.01385493633191907 1.967910769592693e-09 8.705994597546987 0.05177736234303065 S(ph)SPGNKDKEAPCSR ddPTM_A549_MK2206_60min_R1 1 SSPGNKDKEAPCSR 14 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;H7C1R1;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 S(0.5)S(0.5)PGNKDKEAPCSR 42.338 0.027246 5551300.0 1032.2 1335.6 947.46 896.13 1130.4 1096.0 859.5 804.08 1288.6 1579.9 1705.4 True False 1206.4101251328998 1403.5763351911583 1081.8240748492465 1115.6818902288041 964.119657431825 1211.9779925340808 1015.6600244517955 918.0608023917239 996.7341574713575 1222.9994927117962 1281.9021133544418 0.9411093971723029 1.0949169367685363 0.8439209699236416 0.8703331390173953 0.7521008409206429 0.9454528391115717 0.7923070052471072 0.7161707534667923 0.777543111199914 0.9540506096144026 1.0 10.32407038595586 -5.774923178384746 24.979153593856665 0.863883278108014 1.0180131731129158 0.3243621937508846 0.09168726199969605 215.51332088763866 399247.4410335626 0.014966686789061219 0.04690572865919933 1.6791010051875997e-06 5.774923178384746 0.15412989500490182 S(ph)SPGNKDKEAPCSR ddPTM_A549_PD325901_60min_R1 2 SSPGNKDKEAPCSR 14 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;H7C1R1;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 S(0.5)S(0.5)PGNKDKEAPCSR;S(0.5)S(0.5)PGNKDKEAPCSR 43.791000000000004 0.021523 20175000.0 1869.75 1799.3600000000001 2229.7 1952.77 2098.2 2517.8 1941.8600000000001 2688.8 1697.8600000000001 2134.8 2230.12 True False 2059.5656435628 1950.9983820544685 2381.0208502753153 2073.388167837552 1950.8296703970432 2497.2958715739283 2015.758544926566 2635.1697746772074 1626.5048486671951 2000.0083636727534 1955.8293778954496 1.0530395272919841 0.9975299502627476 1.2173970169306838 1.0601068739792632 0.9974436893346053 1.2768475102164167 1.0306413062961568 1.3473413399244238 0.8316189883686987 1.0225883639322577 1.0 10.933564803009075 -8.792734856315624 24.9999959141596 0.9204867425618899 1.1173671498883477 0.2796721040771529 0.11933667278620187 150.49383810683378 120219.42827948666 0.020176122353847782 0.021480134102036294 1.6116292601687874e-09 8.792734856315624 0.19688040732645784 S(ph)SPGPAPR ddPTM_A549_MK2206_60min_R1 3 SSPGPAPR 8 0 Q9H330;Q9H330-4 Q9H330 TMEM245 Transmembrane protein 245 1 S(0.982)S(0.018)PGPAPR;S(0.985)S(0.015)PGPAPR;S(0.972)S(0.028)PGPAPR 120.87 0.0011923 1095945000.0 7220.4400000000005 7102.01 8014.04 5992.2 9263.17 8152.16 7647.49 7203.000000000001 10993.48 10234.0 10712.0 True False 8439.073749190653 7463.471973862655 9150.551378216343 7460.289269000081 7900.569963847098 9014.816160234155 9036.939942286044 8224.047308262348 8503.474332980157 7922.132292178311 8051.9147638400345 1.0480828469632208 0.9269188997603416 1.1364441436104271 0.9265236267158643 0.9812038745525966 1.1195866355563486 1.1223342779123313 1.0213778398642936 1.0560810170480206 0.9838817876904811 1.0 12.975116184885056 S(ph)SPGPAPR ddPTM_A549_PD325901_60min_R1 4 SSPGPAPR 8 0 Q9H330;Q9H330-4 Q9H330 TMEM245 Transmembrane protein 245 1 S(0.84)S(0.16)PGPAPR;S(0.823)S(0.177)PGPAPR;S(0.957)S(0.043)PGPAPR;S(0.95)S(0.05)PGPAPR 117.76 0.0012572000000000002 1263425000.0 8920.6 8955.96 8277.7 8027.620000000001 9367.109999999999 8323.53 8356.849999999999 8890.279999999999 8659.710000000001 9235.83 10621.480000000001 True False 9826.212745001369 9710.710180144353 8839.474499853786 8523.467855352192 8709.196508375197 8255.745931337575 8674.874499793783 8712.956391110256 8295.772503652712 8652.678117603395 9315.10529510921 1.0548686712280655 1.0424691801651293 0.9489398369436416 0.9150157282524054 0.9349541666424169 0.8862751058404204 0.9312696126310486 0.935357799517832 0.8905720591272664 0.9288867751335441 1.0 13.1853563617059 -5.764157533535721 4.320669603931625 0.9377785382016128 1.052132058718354 0.7063453165861575 0.029260473025848985 0.11544514276338864 5.04160422705085 0.0058419285558972195 0.022279506655284297 1.7212441073363042e-06 5.764157533535721 0.11435352051674119 S(ph)SPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR ddPTM_A549_MK2206_60min_R1 1 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 36 1 P40222 P40222 TXLNA Alpha-taxilin 1 S(0.5)S(0.5)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 84.713 9.6603e-07 48927000.0 340.76 394.71 381.26 349.03 620.3 303.63 431.53 0.0 669.92 528.06 495.31 True False 398.27195721787126 414.7990530572794 435.3284009636546 434.542365668552 529.0546917064412 335.7599250667181 509.93341518520407 0.0 518.1841896424121 408.77087924640216 372.31085713943276 1.0697296347409926 1.1141202172944813 1.169260559061863 1.1671493251828893 1.4210025884587805 0.9018268434244825 1.369644224461149 0.0 1.391805207142667 1.0979289789911093 1.0 8.540363877714968 -7.283734235399057 24.782033233131298 1.0882615032522518 1.181906595511382 0.028518155547268775 0.3659350231798958 3706.0372939981658 4119467.541279258 0.05599395590661843 0.08955100929717627 5.2031430318321363e-08 7.283734235399057 0.09364509225913031 S(ph)SPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR ddPTM_A549_PD325901_60min_R1 1 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 36 1 P40222 P40222 TXLNA Alpha-taxilin 1 S(0.5)S(0.5)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 114.47 4.008e-21 68798000.0 647.41 719.67 549.73 669.69 685.06 476.76 594.25 628.67 767.91 386.75 617.3 True False 713.1345866019483 780.3191165820849 587.0379835950355 711.0552303236585 636.9437489287001 472.8774246292744 616.8645089360775 616.1306836679256 735.6374131789587 362.33053899683205 541.3760133871092 1.3172629909113163 1.4413625600071058 1.0843442802761856 1.3134221183442436 1.176527465529315 0.873473173794172 1.1394381976339807 1.1380827159539544 1.3588289746648665 0.6692770459664764 1.0 9.080487157611902 -11.09869184375566 1.4443879046273573 1.0003707639347517 1.218041792611375 0.3105860891245429 0.1799692427899392 0.5441778389482357 2.0349305806354017 0.11295321062300404 0.024826223664077093 7.96724470509545e-12 11.09869184375566 0.21767102867662325 S(ph)SPGQTPEEGAQALAEFAALHGPALR ddPTM_A549_MK2206_60min_R1 2 SSPGQTPEEGAQALAEFAALHGPALR 26 0 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 1 S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR 285.24 4.6468999999999985e-154 128075000.0 6319.6 6620.6 6632.2 5698.700000000001 8836.4 6975.7 6179.799999999999 6226.9 10068.2 9371.3 8787.900000000001 True False 7386.193980614097 6957.560261131016 7572.74568764399 7094.881755824362 7536.577265508296 7713.863943905093 7302.589667373121 7109.582144081467 7787.768775611617 7254.31682134949 6605.621896298531 1.1181678419639731 1.0532786118184714 1.1464091960648533 1.0740671911300264 1.1409337960641415 1.1677725526838838 1.1055113026473915 1.076292627052319 1.1789607243453493 1.0982034599065464 1.0 12.689478677242452 -10.989483162073364 1.246192979772041 0.9995806772911505 1.1225368525616712 0.13548670517818617 0.04700700247366637 0.2746451840023535 0.7546502677462952 0.028803785079127595 0.00650207450076882 1.0245115006287314e-11 10.989483162073364 0.12295617527052072 S(ph)SPGQTPEEGAQALAEFAALHGPALR ddPTM_A549_PD325901_60min_R1 3 SSPGQTPEEGAQALAEFAALHGPALR 26 0 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 1 S(0.5)S(0.5)PGQT(0.001)PEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR 261.75 4.709399999999998e-138 125884000.0 9666.61 10414.630000000001 11237.1 10883.3 12835.099999999999 11174.35 12424.84 10923.599999999999 13948.14 12127.36 13493.3 True False 10647.957131017836 11292.307420247163 11999.717180171674 11555.536723232348 11933.606854691197 11083.349798443933 12897.67408533333 10705.720228601582 13361.948181763439 11361.636419931801 11833.709641076102 0.8997987489956328 0.9542491545550794 1.0140283600097253 0.9764931770103445 1.008441749598819 0.936591325510676 1.089909629062056 0.9046799822974239 1.1291428121053988 0.9601077569534339 1.0 13.530614781362425 -8.083930976972544 1.121410786712978 1.0556983596687572 0.9690134684511732 0.0 0.06944024702438752 0.5197176772891933 1.2942319284655057 0.012949737343459245 0.01844860891241096 8.242691068416276e-09 8.083930976972544 -0.08668489121758405 S(ph)SPIMR ddPTM_A549_MK2206_60min_R1 2 SSPIMR 6 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.958)S(0.042)PIMR;S(0.954)S(0.046)PIMR 143.56 0.006853699999999999 78957000.0 7327.3 7752.799999999999 6551.9 6279.5 10450.599999999999 9238.5 7959.400000000001 8671.5 10766.8 10434.8 10858.7 True False 8563.969104714484 8147.38440511382 7481.057940181938 7817.97778189747 8913.330583826106 10216.111937980022 9405.51995185761 9900.711680354985 8328.13699104658 8077.571432716657 8162.185105126006 1.049225053636207 0.9981866743008694 0.9165508799210755 0.9578290226458638 1.0920274986447398 1.2516393351045312 1.1523286755590443 1.21299769030442 1.0203317964225478 0.9896334533804911 1.0 12.994739713613795 -4.192151157983615 10.776771349778814 1.0417629690442123 1.050639245068838 0.0 0.1034492388151754 0.0 0.0 0.01464927302456572 0.0 6.424640661329054e-05 4.192151157983615 0.008876276024625707 S(ph)SPIMR ddPTM_A549_PD325901_60min_R1 2 SSPIMR 6 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.5)S(0.5)PIMR;S(0.972)S(0.028)PIMR 123.45 0.015541999999999999 178946000.0 12173.8 12233.1 12129.2 11289.3 14105.900000000001 10677.0 11055.9 12316.4 12889.9 13168.8 15147.099999999999 True False 13409.675214122108 13264.026269068192 12952.360450804765 11986.61442113945 13115.150246713212 10590.050051948067 11476.63832452062 12070.739739971108 12348.182328834699 12337.319720598529 13284.102725378072 1.009452839332847 0.9984886855570964 0.9750271221601182 0.9023277423352133 0.9872816040226721 0.7971972417615183 0.8639377880295629 0.9086605237485145 0.9295458326473656 0.928728117784666 1.0 13.697413163842704 -5.981410812163273 4.016045082132122 0.9403608464158695 1.002512707860191 0.20588612934538353 0.05634857633403964 0.3420372685360532 12.547933074357028 0.009163408662841106 0.02957680402809573 1.0437324543141703e-06 5.981410812163273 0.0621518614443215 S(ph)SPKGPPLPAENK ddPTM_A549_PD325901_60min_R1 1 SSPKGPPLPAENK 13 1 Q9BYV8 Q9BYV8 CEP41 Centrosomal protein of 41 kDa 1 S(0.5)S(0.5)PKGPPLPAENK 106.36 2.618e-05 6996900.0 2589.9 2505.0 2367.9 2603.5 3263.6 3844.2 3349.5 3772.8 3372.9 3176.1 3920.4 True False 2852.8247414163907 2716.105141298266 2528.599933339427 2764.3122820224958 3034.3759948087827 3812.894109740446 3476.967055416727 3697.548544295657 3231.1487425757027 2975.560503963382 3438.215653463185 0.8297399084152409 0.7899752124513876 0.735439596638583 0.8039961889063324 0.8825438252403889 1.108974681649146 1.0112707886471604 1.0754265924451993 0.9397748914676392 0.8654374256501951 1.0 11.747444321748132 -6.962971157077163 3.7529492310889316 0.991805574516073 0.7872149976545948 0.7000285338178207 0.06425455333081674 0.08740941555179339 2.6349713277052746 0.00838606981175425 0.016110737400737294 1.0890024151586931e-07 6.962971157077163 -0.2045905768614782 S(ph)SPKSEIEVISEPPEEK ddPTM_A549_MK2206_60min_R1 2 SSPKSEIEVISEPPEEK 17 1 B7ZM87;O75044;A0A075B7E9;A0A075B7E6;Q5VZB4 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 S(0.499)S(0.499)PKS(0.002)EIEVISEPPEEK;S(0.5)S(0.5)PKSEIEVISEPPEEK 160.3 7.322499999999999e-23 31506000.0 7039.9 8222.7 7601.3 6217.9 10547.2 7456.9 8013.700000000001 7951.0 10479.4 10838.3 11628.6 True False 8228.063010969865 8641.200308008645 8679.278639891481 7741.285779132138 8995.720851791359 8245.984208510383 9469.685558987032 9078.078598916276 8105.832632163084 8389.920502473742 8740.897686966971 0.941329289695066 0.9885941487329181 0.9929504898372891 0.8856396741349238 1.0291529742081684 0.943379559379293 1.0833767764044089 1.0385750896560721 0.9273455567669217 0.9598465515714077 1.0 13.093565736245019 S(ph)SPKSEIEVISEPPEEK ddPTM_A549_PD325901_60min_R1 1 SSPKSEIEVISEPPEEK 17 1 B7ZM87;O75044;A0A075B7E9;A0A075B7E6;Q5VZB4 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 S(0.5)S(0.5)PKSEIEVISEPPEEK 192.64 1.4495e-40 25104000.0 4103.7 4949.6 4796.1 4306.3 5545.5 4130.4 4544.5 4535.0 4352.4 4804.8 5253.7 True False 4520.304603015728 5366.720162622714 5121.592187292211 4572.290370683108 5156.003210936425 4096.763391829754 4717.443434345817 4444.545867361322 4169.4837638787085 4501.424108007702 4607.5282059482515 0.9810693284915937 1.1647720692614225 1.1115704469655356 0.992352117298023 1.1190388816893404 0.8891455914563675 1.0238555736361346 0.9646269471825432 0.9049285381467586 0.976971579294171 1.0 12.169777282304752 -7.25418882596286 24.99827429173651 0.9564600111057009 1.0763946214246072 0.461426294597174 0.06114702555231259 391.305497375832 1349131.6258431645 0.009122726121820244 0.015592930366530361 5.569435439973291e-08 7.25418882596286 0.11993461031890629 S(ph)SPKSNDSDLQEYELEVK ddPTM_A549_MK2206_60min_R1 2 SSPKSNDSDLQEYELEVK 18 1 Q53EP0;Q53EP0-2 Q53EP0 FNDC3B Fibronectin type III domain-containing protein 3B 1 S(0.499)S(0.499)PKS(0.001)NDS(0.001)DLQEYELEVK;S(0.5)S(0.5)PKSNDSDLQEYELEVK 172.24 6.709799999999999e-31 16460200.0 4702.8 6637.0 5695.5 5459.2 7957.5 5672.1 5234.4 4756.4 9272.599999999999 9734.9 9315.1 True False 5496.517667578956 6974.794951080949 6503.207542591651 6796.704245072798 6786.962291236509 6272.317857164742 6185.4227248289435 5430.634265864086 7172.370905299478 7535.779328818317 7001.903586318731 0.7850033351385755 0.9961283906721095 0.9287770764651059 0.9706937779539153 0.9693024486223714 0.8958018030154611 0.8833915875269779 0.7755939793965738 1.0243458535067278 1.0762472284740887 1.0 12.773531481176079 S(ph)SPKSNDSDLQEYELEVK ddPTM_A549_PD325901_60min_R1 1 SSPKSNDSDLQEYELEVK 18 1 Q53EP0;Q53EP0-2 Q53EP0 FNDC3B Fibronectin type III domain-containing protein 3B 1 S(0.499)S(0.499)PKSNDS(0.001)DLQEYELEVK 223.15 1.685e-64 10635000.0 4998.8 5046.3 6331.8 7313.8 7244.6 6913.0 7359.6 7818.1 7263.0 6836.9 7443.9 True False 5506.27449607794 5471.569410991392 6761.514024206509 7765.556815155031 6735.76428851321 6856.702819997844 7639.673605327645 7662.1618623192 6957.761367762859 6405.216967207346 6528.347490769967 0.8434407794411872 0.8381247197284322 1.035716011405061 1.1895133992383644 1.0317717152826955 1.0502968522573466 1.1702308457276385 1.1736755546717241 1.0657768106860142 0.9811390977982241 1.0 12.67250213576257 -5.787621461057826 5.22091444210003 1.0631803958237562 0.8382894267020682 0.6359495731228688 0.06859268676444295 0.08723167223175401 6.247687080821176 0.010185562657987274 0.035373941706713034 1.6307167756761037e-06 5.787621461057826 -0.22489096912168804 S(ph)SPLKLEFDFTEDTGNIEAR ddPTM_A549_PD325901_60min_R1 2 SSPLKLEFDFTEDTGNIEAR 20 1 E5RFM9;R4GMT7;O75410-7;H0YAY0;E7EVI4;E7ET87;O75410-3;O75410-9;O75410;O75410-2 E5RFM9;O75410-9 TACC1 Transforming acidic coiled-coil-containing protein 1 1 S(0.5)S(0.5)PLKLEFDFTEDTGNIEAR;S(0.5)S(0.5)PLKLEFDFTEDTGNIEAR 64.152 0.00052194 2594800.0 2216.5 2199.8 2398.7 2512.3 2570.3 2367.0 2229.6000000000004 2813.7 2277.41 3137.0 2757.1000000000004 True False 2441.51744829894 2385.1848661987724 2561.4902065548754 2667.4790651527255 2389.7709950536264 2347.723936776348 2314.448648083936 2757.57854619505 2181.6983776066095 2938.929284636229 2417.9941786969057 1.0097284227601868 0.9864311863166624 1.0593450675449112 1.1031784479275593 0.9883278529402874 0.9709386223756638 0.9571770968163488 1.140440523178245 0.9022761083661336 1.2154410091342995 1.0 11.239595055975668 S(ph)SPLLR ddPTM_A549_MK2206_60min_R1 4 SSPLLR 6 0 P56524-2;P56524;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UQL6-2;Q9UKV0-5;Q9UKV0-7;Q9UQL6;Q9UQL6-3 P56524-2 HDAC4;HDAC9;HDAC5 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 1 S(0.913)S(0.087)PLLR;S(0.983)S(0.017)PLLR;S(0.98)S(0.02)PLLR;S(0.985)S(0.015)PLLR 114.43 0.020398 39979000.0 6761.9 7012.15 6719.219999999999 5854.18 8075.7 5643.719999999999 6330.889999999999 5757.219999999999 7829.120000000001 8951.51 8947.210000000001 True False 7903.143407417315 7369.038483685748 7672.106432153929 7288.454362804124 6887.775227815102 6240.934704401864 7481.130764632489 6573.323565746794 6055.836820535586 6929.3576739063 6725.370826566207 1.1751238126823775 1.0957073853202204 1.140770766401159 1.0837252771272705 1.0241480217874936 0.9279688608023294 1.1123744634393866 0.9773919885251823 0.9004465295228239 1.0303309442111823 1.0 12.71539810250214 -6.672374350129335 0.6654146085648829 0.9576528825330318 1.1664253306451564 0.5172003159975076 0.057939928604402766 0.5024813640376552 0.36170696919853335 0.011082273822955836 0.056189318348136556 2.1263054379004738e-07 6.672374350129335 0.2087724481121246 S(ph)SPLLR ddPTM_A549_PD325901_60min_R1 2 SSPLLR 6 0 P56524-2;P56524;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UQL6-2;Q9UKV0-5;Q9UKV0-7;Q9UQL6;Q9UQL6-3 P56524-2 HDAC4;HDAC9;HDAC5 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 1 S(0.99)S(0.01)PLLR;S(0.986)S(0.014)PLLR 134.08 0.010835 78833000.0 7993.1 8143.2 7650.3 7489.5 9866.599999999999 9018.1 8367.6 8734.099999999999 9246.400000000001 8935.8 9602.0 True False 8804.55362779078 8829.456042562882 8169.495362991102 7952.109405111385 9173.604053922147 8944.659583541528 8686.033596926416 8559.891523731094 8857.805963222147 8371.592063006836 8421.014872093025 1.0455454314620427 1.0485026064760221 0.9701319243675189 0.9443172261177715 1.089370366073474 1.0621830883096817 1.0314711146885223 1.0164916763296907 1.051869174649796 0.9941310151048451 1.0 13.039778397134869 S(ph)SPLPAK ddPTM_A549_MK2206_60min_R1 1 SSPLPAK 7 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 S(0.893)S(0.107)PLPAK 105.14 0.009896799999999999 28852000.0 3349.2 3974.9 3641.5 3401.9 4862.1 4496.4 4106.2 4018.0 5578.4 4960.0 5847.7 True False 3914.4630799216307 4177.205431829393 4157.919456825126 4235.365652717095 4146.891530784926 4972.206063531242 4852.243388486284 4587.563804608927 4314.901306874303 3839.5325551303954 4395.55470169038 0.8905504186800955 0.9503249795123656 0.9459373705953726 0.9635565793523894 0.9434284890574045 1.1311896679659341 1.1038978508492403 1.0436825647613273 0.9816511452388341 0.8735035315688011 1.0 12.101829523951265 -7.057905851165011 24.9999946779216 1.0145645976730593 0.940896563658853 0.2851839723687921 0.06521701938709394 270.18638445621224 116648.49992469639 0.008447205257335168 0.014631019813891465 8.751734797629819e-08 7.057905851165011 -0.0736680340142063 S(ph)SPLPAK ddPTM_A549_PD325901_60min_R1 2 SSPLPAK 7 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 S(0.949)S(0.051)PLPAK;S(0.944)S(0.056)PLPAK 117.4 0.0070109 75668000.0 7566.9 8647.400000000001 8168.2 8417.9 9173.5 8370.3 8736.8 8940.6 8712.0 9103.0 8562.0 True False 8335.086117542634 9376.146746052944 8722.543171376801 8937.854564562003 8529.185006856955 8302.135051964124 9069.283704960404 8762.272719234981 8345.864936796088 8528.2350264723 7508.92827898984 1.1100234025226214 1.2486664404942616 1.1616229170523156 1.190296968153276 1.1358724827245743 1.1056351510499436 1.2078000172589844 1.1669138915272408 1.1114588695896879 1.1357459692795981 1.0 12.874391296673194 -9.913087020218276 0.46718007810470463 0.9872484513210916 1.1757262131382333 0.1721660820434855 0.05658868007996835 0.43289227356183774 0.18627770510438782 0.03504212992843058 0.011938478925437134 1.2215548709115332e-10 9.913087020218276 0.1884777618171417 S(ph)SPLSWR ddPTM_A549_MK2206_60min_R1 2 SSPLSWR 7 0 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.673)S(0.327)PLSWR;S(0.552)S(0.448)PLSWR 125.31 0.006019699999999999 8900100.0 2615.5 2252.9 2128.4 1737.49 3761.3 2950.8 2689.5 2823.5 4662.9 4123.5 4285.2 True False 3056.932457164404 2367.5629870860744 2430.2391245109425 2163.17512799889 3208.01775256398 3263.0516974174857 3178.1473365481133 3223.739771606102 3606.7605951212145 3191.998486104876 3221.066574496573 0.9490435501607656 0.7350245430602766 0.754482736790614 0.6715710706280502 0.9959489126875211 1.013034540562849 0.9866754576610489 1.000829910542891 1.1197410893889774 0.9909756325367972 1.0 11.653322763980604 -6.875730397888391 5.769831965865266 1.043060902643264 0.7738569586201669 0.7007358752553967 0.07377310900518438 0.08222756665686254 3.8689553169692994 0.011244530252202563 0.021513801035158858 1.3312805962824976e-07 6.875730397888391 -0.2692039440230971 S(ph)SPLSWR ddPTM_A549_PD325901_60min_R1 1 SSPLSWR 7 0 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.548)S(0.452)PLSWR 127.46 0.0057849 5922000.0 1792.9 1523.1 1413.1 1268.7 1341.9 1236.6 1150.6 1273.4 1991.6 1893.8 1997.9 True False 1974.9138881367792 1651.4569823199151 1509.0014636606054 1347.0647175732445 1247.6495733036859 1226.5295395934234 1194.3867126324792 1248.0010380370247 1907.8999779755604 1774.2251448020702 1752.1709657315823 1.127123966074963 0.9425204586873084 0.8612181648784217 0.7687975339842512 0.7120592668779647 0.7000056293486815 0.6816610570497543 0.7122598550284436 1.0888777495402435 1.0125867734951763 1.0 10.774927835502648 -8.76844733389704 24.9994476313146 1.0419700608191345 0.8061066604598083 0.37589566869144164 0.1262434944511604 122.22311834751532 436004.8618717506 0.023576828869150402 0.02535951610857467 1.7043259873008701e-09 8.76844733389704 -0.23586340035932618 S(ph)SPNPFITGLTR ddPTM_A549_MK2206_60min_R1 1 SSPNPFITGLTR 12 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 S(0.986)S(0.014)PNPFITGLTR 172.33 9.5838e-16 10653000.0 1363.3 1394.3 1482.8 691.24 1361.4 1224.8 1165.4 1156.0 1989.6 1467.4 1700.8 True False 1593.3917105150963 1465.263914463187 1693.0833366964976 860.5938310309425 1161.1398634356747 1354.4075230435592 1377.1380948180602 1319.866540101523 1538.958776738332 1135.913320846439 1278.4444203079836 1.246351961183608 1.1461303214966494 1.3243308115722585 0.6731570159488209 0.9082443045556492 1.05941838497545 1.0771982519868175 1.032400407194519 1.2037744874099332 0.8885120876610278 1.0 10.320173726204487 -2.2068622767556945 0.003992345369239687 0.02615251697964815 2.195603046519969 0.004256313347842489 0.17505114076813874 555075.9829878844 171.88140649419233 44021.59377087114 49532.4448927514 0.006210659551231949 2.2068622767556945 2.169450529540321 S(ph)SPNPFITGLTR ddPTM_A549_PD325901_60min_R1 3 SSPNPFITGLTR 12 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 S(0.832)S(0.168)PNPFITGLTR;S(0.917)S(0.083)PNPFITGLTR;S(0.874)S(0.126)PNPFITGLTR 158.11 7.4731e-14 23417700.0 4785.5 4462.2 4974.7 4892.3 5401.3 5172.700000000001 4850.6 5406.599999999999 4777.0 5321.6 4819.299999999999 True False 5271.320437101097 4838.24525409226 5312.313057301261 5194.4862597805495 5021.931321473431 5130.575246203217 5035.19223735017 5298.761121604348 4576.239302464982 4985.593267810064 4226.556652059772 1.2471902948543632 1.1447250450870894 1.256889116750004 1.2290113885611982 1.1881850250430313 1.213890092707708 1.191322547373479 1.253682739357592 1.0827346417407644 1.1795874699515463 1.0 12.045267072351331 -8.979450632170465 2.2476045183065683 1.0306621314301792 1.2135862140958187 0.4178106420608486 0.05760705843650513 0.08036886180524146 0.8114929883059702 0.007288265023650725 0.007344459880689537 1.0484539683741113e-09 8.979450632170465 0.18292408266563953 S(ph)SPPLPPPAEER ddPTM_A549_MK2206_60min_R1 2 SSPPLPPPAEER 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 S(0.981)S(0.019)PPLPPPAEER;S(0.995)S(0.005)PPLPPPAEER 174.29 7.391600000000001e-16 79282000.0 15604.5 17834.2 14715.8 15309.1 21742.0 16117.1 16086.8 15686.3 23686.0 23392.0 23476.0 True False 18238.1581066037 18741.884603972874 16802.721719826208 19059.830187251624 18543.78060145324 17822.600824334884 19009.563329087996 17909.881062279015 18321.158818769654 18107.730953550432 17646.26129536115 1.033542335191316 1.062088126786366 0.9521972636913921 1.0801058574522 1.0508617259525694 1.009993024925914 1.077257273419454 1.0149391286066451 1.0382459214511304 1.0261511291522467 1.0 14.10707493233806 -10.70127404732431 0.7336365185683285 0.9973595920630554 1.035866910243503 0.038658940790511465 0.034807265412979425 1.31359539962591 1.1169064220506757 0.03068314458746447 0.006151844820278866 1.9894175859466297e-11 10.70127404732431 0.038507318180447614 S(ph)SPPLPPPAEER ddPTM_A549_PD325901_60min_R1 2 SSPPLPPPAEER 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 S(0.981)S(0.019)PPLPPPAEER;S(0.892)S(0.108)PPLPPPAEER 166.71 7.2321e-15 113705000.0 79555.0 87329.0 90946.0 85442.0 98155.0 99209.0 95879.0 102004.0 105127.0 102291.0 114003.0 True False 87631.36503470426 94688.52131115204 97118.14246272533 90719.55828713896 91260.93141636733 98401.07479663903 99527.72781200171 99969.45019941001 100708.87777899006 95832.32880290861 99981.35372455961 0.8764770806776776 0.9470618048642462 0.9713625475633968 0.9073647726061389 0.9127795135459325 0.9841942635396385 0.9954628948733021 0.9998809425487237 1.0072765973586908 0.9585020129545233 1.0 16.609371440462535 -7.396902682903202 3.7668395472037792 1.0023219193145037 0.9262680422560847 0.6135028169449246 0.026204695734995086 0.09606558692346606 2.4277814860747147 0.003371542622793198 0.005492771058580981 4.009565542656789e-08 7.396902682903202 -0.07605387705841893 S(ph)SPPLRTPDVLESSGPAVR ddPTM_A549_PD325901_60min_R1 1 SSPPLRTPDVLESSGPAVR 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 S(0.582)S(0.418)PPLRTPDVLESSGPAVR 207.24 2.5618999999999998e-56 39156000.0 2898.4 2864.6 3405.9 3509.1 3671.4 4094.0 3330.0 4261.6 3403.5 3574.8 3862.7 True False 3192.6434343106916 3106.0098953145734 3637.0448553404954 3725.8491372556714 3413.533529642409 4060.6598213613743 3456.72497224592 4176.599044839476 3260.462730990072 3349.0865179208154 3387.612387672747 0.9424464988758655 0.9168728708801211 1.0736307579271505 1.0998451743811486 1.0076517437661956 1.1986789976733447 1.0204015621222393 1.232903463229084 0.9624662912600738 0.9886274268295498 1.0 11.72605309487723 -4.180043570766326 16.11971059569632 1.0198775149767052 1.0347670182954967 0.0 0.09911300153595427 0.0 0.0 0.013218075630843323 0.0 6.606271669999974e-05 4.180043570766326 0.014889503318791464 S(ph)SPPPR ddPTM_A549_PD325901_60min_R1 1 SSPPPR 6 0 Q96JH8-1;Q96JH8;A0A087WYG1;F8WEM1 Q96JH8-1 RADIL;ADAM10 Ras-associating and dilute domain-containing protein 1 S(0.936)S(0.064)PPPR 89.369 0.022576 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)SPQAGR ddPTM_A549_PD325901_60min_R1 1 SSPQAGR 7 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.869)S(0.131)PQAGR 65.47399999999999 0.024998 5845300.0 1512.9 1638.2 1324.2 1120.8 1353.8 1199.5 781.34 1071.1 1477.6 1634.6 2211.2 True False 1666.4884942618858 1776.2568632633997 1414.0681750614772 1190.029270478515 1258.7137583564568 1189.7316696929577 811.0743212656537 1049.7360702383048 1415.5016104924125 1531.3910770374196 1939.2364179516878 0.8593529282118726 0.9159568409609208 0.7291881288796557 0.6136586851723214 0.6490770009806072 0.6135052223027081 0.41824416752772636 0.541314127829285 0.7299273040610136 0.7896876641038675 1.0 10.921272981977172 -10.101583641763575 0.928893305265521 0.9745201951249143 0.6704755294023967 0.22667696460388098 0.14317713788739034 0.3824294944990156 0.6600964382644323 0.0617680653145693 0.028851707319912205 7.914370152877764e-11 10.101583641763575 -0.30404466572251754 S(ph)SPQAGRR ddPTM_A549_PD325901_60min_R1 1 SSPQAGRR 8 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.5)S(0.5)PQAGRR 61.998999999999995 0.0044205 25855000.0 1294.8 1205.5 759.11 1009.1 962.17 519.27 675.17 814.75 929.62 1526.2 1738.3 True False 1426.2471428186188 1307.0917157026186 810.6277694992583 1071.4298151676214 894.5904985063022 515.0412372834196 700.8639638172001 798.4991720909899 890.5513042406313 1429.8354715370776 1524.5001199915964 0.9355506923977682 0.8573903659055295 0.5317334901250954 0.7028073013031495 0.5868090705766776 0.3378427003903802 0.4597336232555124 0.5237777036681319 0.5841595501124266 0.9379044663800744 1.0 10.574120548562568 -10.584271635016727 0.9031956553163286 0.9967850635595413 0.6062336675993312 0.41085032784205444 0.16299034325448955 0.45398260302115123 0.6694498231069873 0.1128436695839455 0.032139976609811834 2.604524007720115e-11 10.584271635016727 -0.39055139596021016 S(ph)SPQLDPLR ddPTM_A549_MK2206_60min_R1 1 SSPQLDPLR 9 0 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.5)S(0.5)PQLDPLR 94.309 0.00095179 95896000.0 1854.5 2069.2 1887.9 1330.4 2338.4 1877.1 1692.2 1771.1 2461.4 2551.1 2390.1 True False 2167.494261828098 2174.5134417322142 2155.632608139546 1656.348059723926 1994.424457659748 2075.733476081863 1999.6508358084093 2022.158848766271 1903.8968300481147 1974.8047381841016 1796.5722065957848 1.2064609782287297 1.2103679628065533 1.1998585975144984 0.9219490614643533 1.1101276365834811 1.1553854993755268 1.1130367198529838 1.125565029528057 1.05973855270515 1.0992069959303439 1.0 10.811031204975292 -2.000000000000485 0.10059275394920622 0.9403042633728764 1.679080597493956 0.19970330459532382 0.07622625500687352 84.5172003066827 0.5830939599516686 0.4706601832021028 8.657843904309745 0.009999999999988834 2.000000000000485 0.7387763341210796 S(ph)SPQLDPLRK ddPTM_A549_MK2206_60min_R1 4 SSPQLDPLRK 10 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.5)S(0.5)PQLDPLRK;S(0.5)S(0.5)PQLDPLRK;S(0.5)S(0.5)PQLDPLRK;S(0.5)S(0.5)PQLDPLRK 74.46 0.00067487 711641400.0 6031.0 6610.700000000001 6975.4 5659.1900000000005 10101.400000000001 7393.400000000001 6856.7 7571.3 10950.0 8745.9 8726.900000000001 True False 7048.885356206665 6947.156393417338 7964.616608303714 7045.691804050697 8615.49744124367 8175.764680658274 8102.473635437608 8644.554961133794 8469.842483556866 6770.195115708647 6559.769879812883 1.074562901649796 1.059054893799949 1.2141609773254582 1.0740760625968293 1.3133840971704065 1.246349312621236 1.2351765052570305 1.3178137525428528 1.2911798186125498 1.0320781429457349 1.0 12.679429489890211 -5.751885705400678 24.654606644482445 1.1771819760908884 1.066808828725585 0.15990045052989887 0.10618954687388606 311.5918521133359 804085.2266096973 0.017810915722573036 0.06715588040456849 1.7705748645784845e-06 5.751885705400678 -0.11037314736530335 S(ph)SPQLDPLRK ddPTM_A549_PD325901_60min_R1 3 SSPQLDPLRK 10 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.615)S(0.385)PQLDPLRK;S(0.5)S(0.5)PQLDPLRK;S(0.652)S(0.348)PQLDPLRK 174.23 9.7337e-11 1214820000.0 14528.6 14896.9 14501.5 13353.4 16306.1 13126.6 13290.900000000001 15346.599999999999 13468.0 16719.2 17400.4 True False 16003.532776609967 16152.314043675087 15485.658994603547 14178.209190228232 15160.81578899114 13019.70132171036 13796.692472559545 15040.500023825201 12901.9867962316 15663.54685868347 15260.261110223644 1.0487063531231695 1.0584559416780759 1.014770250833316 0.9290934858728931 0.993483380099841 0.8531768380416364 0.9040928181311669 0.9855991267245608 0.8454630430660119 1.0264271853244795 1.0 13.89749202712176 -6.151487218387749 1.5694210491358849 0.9258336583527244 1.0601271800625154 0.3548214687006087 0.057344757150983645 0.32223429427426975 1.4593375477860742 0.009103298275439977 0.038944690246970254 7.055256078927705e-07 6.151487218387749 0.13429352170979103 S(ph)SPRPGQPPK ddPTM_A549_MK2206_60min_R1 2 SSPRPGQPPK 10 1 P57739 P57739 CLDN2 Claudin-2 1 S(0.914)S(0.086)PRPGQPPK;S(0.893)S(0.107)PRPGQPPK 120.57 1.3990999999999999e-05 357840000.0 19826.3 19839.9 18976.2 17174.3 24645.0 20185.2 19873.2 20255.6 27585.0 31287.0 28372.0 True False 23172.494733503583 20849.66616693552 21667.3105029809 21382.004270983613 21019.753147034095 22321.18446614866 23483.903197132535 23126.89333017338 21337.04154419323 24219.244970234813 21326.449372635292 1.08656130838343 0.9776435731345158 1.0159830229772322 1.0026049764486162 0.9856189738740697 1.0466432586190249 1.1011632919667138 1.0844230526178587 1.0004966683095184 1.1356435638701006 1.0 14.380356171815553 S(ph)SPRPGQPPK ddPTM_A549_PD325901_60min_R1 2 SSPRPGQPPK 10 1 P57739 P57739 CLDN2 Claudin-2 1 S(0.918)S(0.082)PRPGQPPK;S(0.924)S(0.076)PRPGQPPK 124.12 6.6416999999999994e-06 512160000.0 13164.599999999999 13954.4 15674.7 14743.1 17779.3 14557.7 15310.1 15759.3 19428.4 17350.6 17734.9 True False 14501.060500733698 15130.38626097106 16738.479401628243 15653.747802990541 16530.54330325524 14439.146917790053 15892.73423350818 15444.968398568313 18611.891912080944 16255.080154928082 15553.619730793846 0.932327056448716 0.9727887477546563 1.076179030434218 1.006437605774716 1.0628100461095389 0.9283464021691811 1.0218029313165564 0.9930144021709353 1.1966276811585008 1.0450994968550922 1.0 13.924962751542083 -8.655887534754775 22.315495058278884 1.0929756885485569 1.0016441882835627 0.24692737553192023 0.06215277726670479 5.4322259761566105 1129.795009559126 0.013466873099360656 0.015269992039475568 2.2085765937261945e-09 8.655887534754775 -0.09133150026499415 S(ph)SPRPTAEK ddPTM_A549_MK2206_60min_R1 2 SSPRPTAEK 9 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.5)S(0.5)PRPTAEK;S(0.499)S(0.499)PRPT(0.001)AEK 64.64 0.0017239 54112000.0 4983.35 5134.7 4567.799999999999 3967.8399999999997 5008.48 3856.4300000000003 3600.8999999999996 4179.72 5382.4 6965.200000000001 7011.5 True False 5824.417648789994 5396.03429792306 5215.582725493835 4939.960978123107 4271.739226693337 4264.5148629089435 4255.136919195426 4772.208109855659 4163.294993926616 5391.756482458514 5270.3510424443975 1.1051289756381426 1.0238472265825334 0.9896082222019956 0.9373115639431763 0.8105227132483563 0.8091519575384972 0.8073725801046236 0.9054820203479844 0.7899464305883642 1.0230355509597722 1.0 12.363683343360787 -5.98562728212457 1.4996835898677974 0.8802023835740768 1.0852192060059231 0.484943562571143 0.07517633953956954 0.348195078802944 1.3819726385711715 0.012721447892388882 0.07018168483399244 1.0336481171426906e-06 5.98562728212457 0.20501682243184638 S(ph)SPRPTAEK ddPTM_A549_PD325901_60min_R1 2 SSPRPTAEK 9 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.5)S(0.5)PRPTAEK;S(0.5)S(0.5)PRPTAEK 72.321 0.0022456999999999998 114328000.0 4632.5 4483.3 4969.299999999999 4445.7 4453.0 4226.7 4325.0 4520.3 4575.0 5056.0 4968.5 True False 5102.787989733743 4861.1234251427195 5306.546580828421 4720.300792082738 4140.2366420160315 4192.279156557919 4489.59024173081 4430.139070393252 4382.728659991062 4736.76329713764 4357.405997916497 1.1710609459328905 1.1156002969351666 1.217822388679356 1.0832823001436542 0.9501608626774036 0.962104325041657 1.0303355353798835 1.0166918282371513 1.0058114075407878 1.0870603518245794 1.0 12.089253826166802 -6.52854180851372 5.186622624676371 1.0000710097843064 1.1619789927076614 0.7494489203532253 0.040640207128127555 0.04497415242058396 3.667884200496795 0.004209897521388967 0.009301014165290559 2.9611348901446645e-07 6.52854180851372 0.16190798292335495 S(ph)SPRPTAEKK ddPTM_A549_MK2206_60min_R1 2 SSPRPTAEKK 10 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.5)S(0.5)PRPTAEKK;S(0.5)S(0.5)PRPTAEKK 72.958 0.00038652 16292100.0 4415.4 4364.7 3900.0 2765.7 3450.8 2843.1 2693.0 3359.7 3837.5 6906.5 6840.0 True False 5160.611573834336 4586.844586858978 4453.078643860491 3443.2966241569907 2943.191891247118 3143.9549549029607 3182.2832412433804 3835.9477636497295 2968.31237722826 5346.31685322743 5141.439225603607 1.0037289847043709 0.8921324138224118 0.8661151962440434 0.6697145435484062 0.5724451388223082 0.6114931669806637 0.6189479446525558 0.7460844318741097 0.5773310248318221 1.0398483029038956 1.0 12.327956549334006 -5.866615670420332 2.283669266345066 0.743456335164501 0.9668584328248209 0.24230150486614432 0.15252473131721977 0.42735006732747477 4.320824113531055 0.025396457385303554 0.11695628760381033 1.3595160202231836e-06 5.866615670420332 0.22340209766031982 S(ph)SPRPTAEKK ddPTM_A549_PD325901_60min_R1 4 SSPRPTAEKK 10 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.498)S(0.498)PRPT(0.004)AEKK;S(0.5)S(0.5)PRPTAEKK;S(0.5)S(0.5)PRPTAEKK;S(0.5)S(0.5)PRPTAEKK 82.36200000000001 0.0002162 94330000.0 11956.7 11555.4 10755.9 10941.4 12360.8 10804.0 9582.6 10176.4 12022.2 14069.3 14113.599999999999 True False 13170.535381942682 12529.214111679827 11485.860054480992 11617.225428277674 11492.620050445032 10716.015806054782 9947.271086799918 9973.423718768632 11516.948742326676 13180.961996918242 12377.716673481778 1.0640520969557699 1.0122395302941953 0.9279465960865372 0.9385596499527742 0.9284927384924724 0.8657506136824854 0.803643462619492 0.8057563427781359 0.930458261902276 1.0648944667765219 1.0 13.595457583628084 -5.590842594078208 2.713416028519961 0.9314542891011542 1.0613556973381297 0.2805060861412989 0.07337157847189921 0.32584188440511874 4.424606627079739 0.01074552842483252 0.06780975808116198 2.565413677928381e-06 5.590842594078208 0.1299014082369755 S(ph)SPSARPPDVPGQQPQAAK ddPTM_A549_MK2206_60min_R1 2 SSPSARPPDVPGQQPQAAK 19 1 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.981)S(0.019)PSARPPDVPGQQPQAAK;S(0.975)S(0.025)PSARPPDVPGQQPQAAK 219.79 1.4932e-67 143481000.0 14708.1 17895.0 16172.1 15254.400000000001 22364.0 17900.5 16007.8 16939.8 23764.6 21528.9 23054.4 True False 17190.46770147955 18805.779064275077 18465.546958045194 18991.728684796028 19074.285225411648 19794.719028609776 18916.210051680566 19341.06852596175 18381.956044268074 16665.50653752958 17329.356210929203 0.9919853624243663 1.0851977901184078 1.0655645099152282 1.0959281149070272 1.1006920853402482 1.1422651128912527 1.0915702707842414 1.1160869619474847 1.060740850411686 0.9616921906780964 1.0 14.080930438631952 -9.801900315186144 0.9051611219876858 1.0081661366942498 1.0873131352861853 0.48341254554799007 0.038868981007382265 0.3439623745257771 0.5833305588822238 0.012929568372154619 0.007407478341775045 1.5779734247399945e-10 9.801900315186144 0.07914699859193552 S(ph)SPSDTRPK ddPTM_A549_MK2206_60min_R1 2 SSPSDTRPK 9 1 A0A0D9SGE8;Q8IWS0-3;Q5JRC6;Q8IWS0-2;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 1 S(0.498)S(0.498)PS(0.003)DTRPK;S(0.499)S(0.499)PS(0.002)DTRPK 70.942 0.00092802 74484300.0 6465.6 5943.01 5199.5199999999995 4389.23 5579.68 5024.38 4944.71 5541.11 6222.93 7850.53 8742.19 True False 7556.835211256803 6245.483824351905 5936.890120596288 5464.59154704002 4758.9164633574 5556.056556686479 5843.099801637042 6326.579311437673 4813.446290977212 6077.089820570123 6571.262950830351 1.1499821674769406 0.9504236660568758 0.9034625710490093 0.8315892375528069 0.7242011922161872 0.8455081767781657 0.8891897714880977 0.9627645946869682 0.7324994186039961 0.9247978457173467 1.0 12.681954957766115 -5.22643086813111 1.6902260285068142 0.8643831600117728 1.2664152298764528 0.5104898034996732 0.08069005246111659 0.8397861473330639 2.1460569497216864 0.014826373734072848 0.5600807570704989 5.937028474829319e-06 5.22643086813111 0.40203206986468 S(ph)SPSDTRPK ddPTM_A549_PD325901_60min_R1 1 SSPSDTRPK 9 1 A0A0D9SGE8;Q8IWS0-3;Q5JRC6;Q8IWS0-2;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 1 S(0.677)S(0.323)PSDTRPK 103.7 0.00053173 197590000.0 2107.9 2240.9 1634.0 1626.7 1978.9 1770.2 1627.2 1354.3 2000.5 1564.1 2210.7 True False 2321.8924562460347 2429.748507439233 1744.893066040215 1727.177564496253 1839.908890834386 1755.7840781079392 1689.1239864380066 1327.2874240722035 1916.425941926145 1465.342459069024 1938.7979147819256 1.1975938485095798 1.25322422152106 0.8999870758765899 0.8908497122509669 0.9489946718048423 0.9056044803439085 0.8712223040677233 0.6845929707024137 0.9884609052417426 0.7557994816772043 1.0 10.920946720630909 -5.759311627220254 24.998759463404504 0.9449552289448725 1.225409129475102 0.5632281600461542 0.10530879701476961 30.35422994030845 356601.5805983156 0.013938031878263174 0.04918210414787954 1.7405574913184551e-06 5.759311627220254 0.28045390053022945 S(ph)SPSIICMPK ddPTM_A549_MK2206_60min_R1 2 SSPSIICMPK 10 0 F8VQD8;A0A087X050;F8VVY1;F8VX63;F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8 F8VQD8 CNOT2 CCR4-NOT transcription complex subunit 2 1 S(0.496)S(0.496)PS(0.008)IICMPK;S(0.461)S(0.461)PS(0.077)IICMPK 58.37 0.01133 3196700.0 4411.9 5176.299999999999 4732.8 4525.5 5769.5 5382.2 4751.9 4239.7 7296.0 6759.3 6232.0 True False 5156.520859401119 5439.751560235092 5403.9822065802455 5634.247703157416 4920.814192810433 5951.740831584787 5615.258720410101 4840.690458536703 5643.467649317885 5232.369435462275 4684.42240554995 1.1007805046128722 1.1612427508224392 1.1536069420592354 1.2027625212624173 1.0504633798566958 1.270538887469533 1.1987088768419618 1.0333590866617006 1.2047307353477965 1.1169721648635134 1.0 12.193655457622414 -10.908724845841078 0.9925407736255214 0.9935500334309929 1.1571676565688866 0.12645425498834573 0.07461724001022982 0.4437837849959379 0.7234947267549885 0.05454056453587826 0.011018576597472234 1.2338863338986585e-11 10.908724845841078 0.16361762313789374 S(ph)SPSILAVQR ddPTM_A549_MK2206_60min_R1 1 SSPSILAVQR 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.735)S(0.265)PS(0.001)ILAVQR 185.96 4.1411e-14 16554000.0 1458.5 1887.1 1528.2 1457.4 2093.3 1617.6 1633.9 1233.5 2710.3 2313.9 3072.3 True False 1704.6591430985593 1983.145329544202 1744.9217393711815 1814.4630654251719 1785.378342977742 1788.7733583240233 1930.7584804558323 1408.3524024353192 2096.421377459742 1791.1883829266574 2309.36311883362 0.7381511938059894 0.8587412318881323 0.7555856959612665 0.7856984683905384 0.7731042071371935 0.7745743160683503 0.8360566879716137 0.6098445025599221 0.907792005667161 0.7756200695849534 1.0 11.17327932159063 -8.957553278761724 9.066323062234993 0.9595465352322092 0.7716278036147979 0.253716296826621 0.08256267932973663 0.12852817679498615 25.44474002388626 0.010763420680604829 0.011341266000699998 1.1026729508661435e-09 8.957553278761724 -0.18791873161741135 S(ph)SPSILAVQR ddPTM_A549_PD325901_60min_R1 2 SSPSILAVQR 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.953)S(0.047)PSILAVQR;S(0.932)S(0.068)PSILAVQR 213.8 2.0853e-26 50585000.0 3277.2 4363.2 3527.3999999999996 4051.9 3861.9 4220.0 3846.0 3676.1000000000004 4410.7 3926.2000000000003 4144.2 True False 3609.8989314528717 4730.90217665173 3766.790575979349 4302.176660467429 3590.653466831732 4185.63371913654 3992.3616346119547 3602.7773016553383 4225.333617622418 3678.299061950518 3634.4896722482704 0.9932340595206075 1.3016689008020281 1.0364015076838113 1.183708594171388 0.9879388279044355 1.1516427604944426 1.0984655328907036 0.9912746015389514 1.1625658616904684 1.0120537939718914 1.0 11.827537090621705 -11.019120829244857 1.2567742725562963 0.9989799657702565 1.1087161404904688 0.1295625845734838 0.09280344932829457 0.6616167773558398 1.8320651707697821 0.06310483260222369 0.013699994048715237 9.569277981688934e-12 11.019120829244857 0.10973617472021235 S(ph)SPSKCPSLDDR ddPTM_A549_MK2206_60min_R1 1 SSPSKCPSLDDR 12 1 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;A0A2R8Y7V5 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.582)S(0.385)PS(0.014)KCPS(0.018)LDDR 44.36600000000001 0.017095 15620000.0 3406.6 2904.9 3154.3 2703.8 3852.3 3044.6 3050.0 3404.4 4668.2 3799.5 4485.5 True False 3981.550796626367 3052.747002168912 3601.6271708536297 3366.231121378194 3285.6317731109516 3366.7775511580853 3604.145520160527 3886.9841255377414 3610.8601535835737 2941.190311132647 3371.626556497802 1.180899109052608 0.9054226353406948 1.068216515234337 0.9983997530482105 0.9744945705148984 0.9985618201605478 1.0689634393864333 1.1528513198019341 1.0709549509938223 0.8723357293127206 1.0 11.719229035970388 -7.7559452461833445 24.969617275470263 1.047624652565046 1.0147507594522058 0.0 0.09026884733278576 382.24895758485843 1737227.9062288576 0.01110801061329856 0.016216191677424382 1.754101636830347e-08 7.7559452461833445 -0.03287389311284028 S(ph)SPSKCPSLDDR ddPTM_A549_PD325901_60min_R1 1 SSPSKCPSLDDR 12 1 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;A0A2R8Y7V5 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.658)S(0.325)PS(0.016)KCPS(0.001)LDDR 80.128 0.00023559999999999998 33094000.0 6559.9 6627.1 7214.8 6704.0 6311.3 6283.7 6738.2 6759.6 5141.5 6731.6 7888.9 True False 7225.856218856858 7185.588974809477 7704.439714116854 7118.090854111319 5868.016060803001 6232.527630554093 6994.625888284516 6624.774475196386 4925.420635047876 6306.565627177954 6918.6153118573875 1.044407860988153 1.038587730480482 1.1135811671611067 1.0288317146224422 0.8481489136628496 0.9008345383609562 1.0109863857146182 0.9575289529167195 0.7119084402057305 0.9115358121399698 1.0 12.756267611164146 -6.673852697763946 5.078711999662313 0.8815462684049489 1.0635629440730525 0.43082635881824205 0.08065993720272295 0.18094631093923172 7.898996558406833 0.016306942973020277 0.03434893817447863 2.1190797542250147e-07 6.673852697763946 0.18201667566810364 S(ph)SPSPALEQPFR ddPTM_A549_MK2206_60min_R1 1 SSPSPALEQPFR 12 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.5)S(0.5)PSPALEQPFR 71.085 0.0011417 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)SPSQRR ddPTM_A549_MK2206_60min_R1 1 SSPSQRR 7 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.5)S(0.5)PS(0.001)QRR 41.448 0.044701 4103400.0 350.27 294.46 162.48 275.1 221.37 0.0 181.19 176.39 306.88 528.47 749.66 True False 409.3870127206943 309.44675625965004 185.5221071934495 342.49951234970825 188.80676624706572 0.0 214.10987763865126 201.39382267171948 237.37216998666017 409.0882599616448 563.4987324365491 0.7265091989657528 0.5491525329996981 0.3292325191065796 0.6078088425660731 0.33506156336975557 0.0 0.3799651451083972 0.35739889209847825 0.4212470345057763 0.7259790242877057 1.0 9.13826855490237 -10.481583767589711 0.7702953415178437 1.007704058089058 0.40132570067305123 0.4271386386250987 0.19273774554283674 0.3758711759379405 0.39521330860103393 0.13237624711386672 0.03648509650521743 3.299257650307346e-11 10.481583767589711 -0.6063783574160067 S(ph)SPSTGSLDSGNESK ddPTM_A549_MK2206_60min_R1 2 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 S(0.566)S(0.433)PSTGSLDSGNESK;S(0.497)S(0.497)PS(0.004)T(0.001)GSLDSGNESK 133.66 1.8279999999999999e-09 9267800.0 3317.8 3641.1 3402.5 2864.9 4507.5 3326.7 3761.8 3364.0 4641.4 5318.799999999999 5589.5 True False 3877.7635275779244 3826.4164376044673 3885.0256630090603 3566.80062861025 3844.4527210491437 3678.72918591526 4445.270366472091 3840.8573018179272 3590.1303107927697 4117.2793859329695 4201.4728876478575 0.9229533621360204 0.910732150349931 0.9246818358463914 0.8489405320444848 0.915024998102847 0.8755808461195976 1.0580266695379583 0.9141692460065317 0.8544932710020794 0.9799609556062082 1.0 12.036679459029582 S(ph)SPSTGSLDSGNESK ddPTM_A549_PD325901_60min_R1 1 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 S(0.856)S(0.144)PSTGSLDSGNESK 191.01 9.0664e-34 4660600.0 3289.9 4529.9 3813.0 3110.6 4813.5 3722.9 4149.9 4089.9 3891.3 4492.3 4200.5 True False 3623.8882261036247 4911.6505706854305 4071.773109431664 3302.7346973148374 4475.416365673516 3692.581936723562 4307.826715412416 4008.32373603552 3727.762193360265 4208.655411339284 3683.865129163379 0.9837190285320311 1.3332872943154914 1.1052991807972026 0.8965406119699344 1.2148697655198635 1.0023662124574475 1.1693768811755443 1.0880755932956283 1.011916034560922 1.1424564319745025 1.0 11.847004528217022 -8.7385640069014 4.2428843379295325 1.0051548499127891 1.1042419222225013 0.0 0.11905135301969393 0.2937598968075779 11.877152971851546 0.01819289275957395 0.0200977516221618 1.8257276510632056e-09 8.7385640069014 0.09908707230971214 S(ph)SPSVLIHSLGK ddPTM_A549_MK2206_60min_R1 2 SSPSVLIHSLGK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 S(0.489)S(0.489)PS(0.021)VLIHSLGK;S(0.499)S(0.499)PS(0.002)VLIHSLGK 113.52 1.0056e-05 6541400.0 1132.35 1624.17 1455.1999999999998 1494.62 2159.9 1948.86 1368.1599999999999 1472.75 2141.8 1846.1999999999998 1945.3200000000002 True False 1323.4629967004832 1706.8333156090328 1661.5692416784077 1860.8019670960423 1842.1815712022294 2155.087071651431 1616.7369622501085 1681.5168226077158 1656.6857197517888 1429.1421377584143 1462.2433558992993 0.9050907917352345 1.1672703512195528 1.136315124958472 1.2725665393443515 1.2598324100910432 1.4738224406744003 1.1056551946210031 1.1499568904339867 1.1329753785975691 0.9773627159888667 1.0 10.51396771847794 -9.69276414083863 0.7335315058724589 1.014905558103764 1.1955546321479984 0.2358378912528344 0.13086945683625348 0.6721830191442743 0.7686884557486168 0.05399118605312041 0.02954692186878777 2.028784224269603e-10 9.69276414083863 0.18064907404423436 S(ph)SPSVLIHSLGK ddPTM_A549_PD325901_60min_R1 2 SSPSVLIHSLGK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 S(0.498)S(0.498)PS(0.005)VLIHSLGK;S(0.5)S(0.5)PSVLIHSLGK 115.35 8.1606e-06 9185400.0 1949.8400000000001 1980.5700000000002 1822.56 1783.0500000000002 2198.2599999999998 1981.22 1818.56 2448.9 2666.1000000000004 2340.9 2016.6100000000001 True False 2147.7863214036574 2147.47958471102 1946.2498815436065 1893.1849488996388 2043.861801185303 1965.085601191398 1887.7662959542167 2400.0547683751156 2554.0530886124957 2193.095174499506 1768.5797543440447 1.2144130430805808 1.214239606348715 1.1004592112756932 1.0704549479600989 1.1556514746734499 1.1111094064967606 1.0673911036906434 1.3570520427365635 1.4441266119546745 1.2400318216426216 1.0 10.788375563696539 -8.231607066395954 24.839607245509736 1.2266359108572964 1.1328104327337234 0.2074003490667965 0.11255330972401345 1525.2940837687088 1270023.9236064348 0.02734506944661413 0.03529989713745949 5.866687206504798e-09 8.231607066395954 -0.093825478123573 S(ph)SPTPESR ddPTM_A549_MK2206_60min_R1 1 SSPTPESR 8 0 K7EQ92;Q8NCA9 K7EQ92 ZNF784 Zinc finger protein 784 1 S(0.871)S(0.124)PT(0.005)PESR 106.68 0.001887 34066000.0 1626.0 1637.2 1527.2 1197.3 903.59 659.06 583.56 785.68 1277.4 2314.0 2098.2 True False 1900.4290481167343 1720.5264869534024 1743.7799243342945 1490.6385537488395 770.6731079784354 728.8012917513787 689.5852982770093 897.0525460440878 988.0709395886329 1791.265792857203 1577.159032625948 1.2049698279015948 1.0909023448882955 1.105646220997083 0.9451415633507465 0.48864641550781046 0.46209752895872186 0.43723257072488075 0.5687774837458894 0.626487829793238 1.1357547056461201 1.0 10.623112426092256 -6.526213433813376 5.178514259247922 0.7226077617717428 1.1169279057276593 0.47181323583909296 0.2119675293945959 0.14797948784809292 12.06422644312086 0.033640848863041035 0.07451583430387818 2.977052998599153e-07 6.526213433813376 0.3943201439559165 S(ph)SPTQETQAPFIAK ddPTM_A549_MK2206_60min_R1 1 SSPTQETQAPFIAK 14 0 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 S(0.5)S(0.5)PT(0.001)QETQAPFIAK 155.57 6.199300000000001e-19 7278600.0 2324.2 3055.7 2648.5 2380.6 4325.4 2758.9 3170.3 2508.3 4011.3 4381.9 4518.9 True False 2716.46813876563 3211.222078050033 3024.097125196031 2963.8471068691942 3689.13938982273 3050.8449667903983 3746.302472972107 2863.859206346586 3102.74695472983 3392.0257466382814 3396.7324147046984 0.799729801207138 0.9453856489102357 0.8902959538715789 0.8725583134068752 1.0860847836739158 0.8981705340058791 1.1029136286255858 0.8431218172938009 0.9134505094654545 0.9986143541816713 1.0 11.72993185578356 -3.9980259799865725 0.7492409189839289 0.9597684328647664 2.5423176162948815e-15 0.24688508930728204 0.07999687761300837 15.895974895951893 1.482902721345514 0.011920761198407978 19.858574575798542 0.00010045556948243147 3.9980259799865725 -0.9597684328647639 S(ph)SPTQETQAPFIAK ddPTM_A549_PD325901_60min_R1 1 SSPTQETQAPFIAK 14 0 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 S(0.994)S(0.006)PTQETQAPFIAK 258.39 4.6085999999999994e-70 10331000.0 5583.1 5345.7 6367.6 5324.5 6059.3 6725.4 6415.4 6307.9 5717.8 5961.9 6420.1 True False 6149.892201939008 5796.200899735781 6799.743627489395 5653.382272183133 5633.715671450196 6670.630572199262 6659.541557641582 6182.083986048178 5477.500750185107 5585.464616535779 5630.468400367054 1.0922523251419176 1.0294349399701672 1.2076692637234436 1.0040696208888387 1.000576731961222 1.184738124409756 1.1827686586798787 1.0979697507307145 0.9728321625653783 0.9920070976993067 1.0 12.4590392301963 -8.75617904634832 24.448404218900357 0.9871707405887876 1.1002565361023648 0.35161686212813914 0.06752066488569117 77.23100567715018 358945.2739003909 0.011566876916737912 0.012921994185901233 1.7531575795169809e-09 8.75617904634832 0.11308579551357723 S(ph)SPVDLVTATDQKVEK ddPTM_A549_PD325901_60min_R1 2 SSPVDLVTATDQKVEK 16 1 E5RG13;E5RIP7;H0YBL1;P29218;P29218-3;E5RG94;E5RIF4;E5RHE9;E5RI82;E5RGY4;P29218-2 E5RG13 IMPA1 Inositol monophosphatase 1 1 S(0.5)S(0.5)PVDLVTATDQKVEK;S(0.5)S(0.5)PVDLVTATDQKVEK 139.11 1.8395e-11 7570500.0 3797.7 4001.3 3716.3999999999996 4108.2 4781.9 4522.5 4702.0 5133.1 4716.8 4919.299999999999 5032.5 True False 4183.239708281024 4338.503593563571 3968.617252528675 4361.954183600853 4446.035840659432 4485.670259430098 4880.937183033129 5030.716293660951 4518.56929911384 4608.694558467008 4413.534403645925 0.9478207997711179 0.9829998356826283 0.8991925494565731 0.9883131714114515 1.007364038441993 1.0163442377892382 1.1059021493071615 1.1398384681232316 1.0237983633663643 1.044218564300726 1.0 12.107718728284977 -6.68811157963151 2.3245352054151343 1.0297359563056312 0.9471037626266158 0.4774089383325122 0.046091511431866176 0.2700259479079905 2.963346866748099 0.007683406961004068 0.017787538774462444 2.0506352586560072e-07 6.68811157963151 -0.08263219367901542 S(ph)SPVESLKK ddPTM_A549_MK2206_60min_R1 2 SSPVESLKK 9 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.893)S(0.107)PVESLKK;S(0.922)S(0.078)PVESLKK 117.79 7.2814e-05 146123000.0 18456.8 22428.0 21714.0 18196.9 31014.0 22195.0 22601.0 22352.0 33725.0 28591.0 29305.0 True False 21571.85661456393 23569.48940226663 24793.371710970976 22655.14131688989 26451.881683997366 24543.660168151382 26707.309147917425 25520.464450129122 26086.34134775845 22132.273242688127 22027.759723145267 0.9793032467072762 1.069990307616322 1.1255512145849218 1.0284814071712165 1.2008430279091673 1.11421499401787 1.2124387356493274 1.1585592348419327 1.1842484971519234 1.0047446277268515 1.0 14.427035156446804 -5.257143165253151 2.0333131167591705 1.1094646228121805 0.9397360120130791 0.22944913788928079 0.07190448410768621 1.0214273157382394 4.450411716069631 0.011597818189933166 0.3210612787170639 5.531677273166457e-06 5.257143165253151 -0.1697286107991014 S(ph)SPVESLKK ddPTM_A549_PD325901_60min_R1 2 SSPVESLKK 9 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.843)S(0.157)PVESLKK;S(0.836)S(0.164)PVESLKK 120.32 5.902e-05 215450000.0 25278.0 24368.8 22414.4 20814.4 28007.0 24215.2 23985.0 22789.1 23299.9 22624.8 25559.0 True False 27844.20395131995 26422.44429831104 23935.575972736733 22100.05821506782 26039.884938904757 24017.99943972398 24897.762300095605 22334.55352279689 22320.686230584837 21196.266266827475 22415.40503185021 1.242190534222153 1.1787627419967295 1.0678181339452266 0.9859316922297718 1.1616959364287418 1.0714952241816122 1.1107433599668708 0.9963930382280206 0.9957743881437437 0.945611566541383 1.0 14.452202947738513 -2.0000000000000497 0.2701790883158643 0.9941112939200022 2.6635110371811748 0.6211055906302889 0.05564856048728894 21.913336684225165 0.2709525817881018 0.02198556534000489 17.349916771986965 0.009999999999998855 2.0000000000000497 1.6693997432611725 S(ph)SPVGGGPR ddPTM_A549_MK2206_60min_R1 2 SSPVGGGPR 9 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.987)S(0.013)PVGGGPR;S(0.982)S(0.018)PVGGGPR 158.08 1.1165e-05 65546000.0 3039.8 3262.6000000000004 3189.4 2844.5 4155.700000000001 3390.9 3279.1000000000004 4155.200000000001 4381.6 4670.1 5037.7 True False 3552.843924025372 3428.65240430868 3641.7048786483765 3541.402627694456 3544.4020350225023 3749.7227873027473 3874.8700246420954 4744.212324766305 3389.174595977418 3615.121166474689 3786.7000565531107 0.9382427630825851 0.9054459960131229 0.961709357556902 0.9352213206234402 0.9360134106446332 0.9902349621839279 1.0232841172451463 1.252861925664316 0.8950206103893148 0.9546890729352872 1.0 11.886725434941454 -7.25448750774775 21.29435234062885 0.9830345855106234 0.9351263785050504 0.11782440653991877 0.08786068801881859 196.7232418860389 602574.0852691301 0.014433948127234007 0.024581794830804294 5.5656064320205704e-08 7.25448750774775 -0.04790820700557297 S(ph)SPVGGGPR ddPTM_A549_PD325901_60min_R1 4 SSPVGGGPR 9 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.987)S(0.013)PVGGGPR;S(0.985)S(0.015)PVGGGPR;S(0.836)S(0.164)PVGGGPR;S(0.906)S(0.094)PVGGGPR 158.08 1.1165e-05 104601000.0 12333.9 12172.7 13478.6 12980.5 14280.8 12542.699999999999 12170.7 14055.1 13276.1 14134.400000000001 14859.2 True False 13586.02844826272 13198.53614909436 14393.338849406146 13782.276004145575 13277.765874085446 12440.556409718929 12633.86264856258 13774.760004487354 12718.15168588137 13241.951571808211 13031.612600229606 1.0425439172450035 1.0128091245485469 1.1044940707608626 1.0576032626923504 1.0188889342713812 0.9546444320712647 0.9694780712204398 1.0570265113808444 0.9759461147315941 1.0161406709999112 1.0 13.669728001168634 -6.9450234775840585 4.229695160353318 0.9901931086648965 1.0544660576378295 0.4112733498044068 0.03243370862875609 0.14380339393631908 5.376111822451196 0.004569659328191037 0.008780002308838037 1.1349494596277641e-07 6.9450234775840585 0.06427294897293301 S(ph)SPVKKPSLLK ddPTM_A549_MK2206_60min_R1 1 SSPVKKPSLLK 11 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 S(0.5)S(0.5)PVKKPSLLK 69.71600000000001 0.00070258 21514000.0 3047.7 3337.4 3349.2 3108.2 4661.5 4416.1 3700.7 4059.5 5849.2 4505.1 4587.2 True False 3562.077250888916 3507.2594048120473 3824.166921542966 3869.7091395323982 3975.7995250517124 4883.408770830068 4373.069287363301 4634.946556697348 4524.36553925304 3487.394781072165 3448.0716397205915 1.033063585412501 1.0171654684924853 1.1090740915849564 1.1222821170403448 1.153050151061793 1.4162724215398803 1.2682652056839703 1.3442141118253947 1.3121437174140802 1.011404386410823 1.0 11.751574033913906 -6.227719330277043 1.573974768857982 1.1948233330945415 1.0265174585435122 0.2535594660647955 0.12292356469943891 0.603397800624774 2.776632418551428 0.02226914285913341 0.08745111694485921 5.919440638616278e-07 6.227719330277043 -0.1683058745510293 S(ph)SPVKKPSLLK ddPTM_A549_PD325901_60min_R1 1 SSPVKKPSLLK 11 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 S(0.499)S(0.499)PVKKPS(0.001)LLK 44.426 0.011566 46174000.0 2824.2 2727.9 2866.3 2925.2 3531.4 3359.2 3499.2 3039.5 3524.3 3249.5 3182.2 True False 3110.910704933844 2957.7897065658817 3060.8243544620987 3105.8829603887866 3283.3666466686295 3331.8437889392117 3632.3639708357114 2978.874788058376 3376.1859270833847 3044.3260154368622 2790.8095736278283 1.1146983063018199 1.059832148533514 1.0967514170030859 1.1128967700764292 1.1764925409799698 1.1938628204604023 1.3015449012215943 1.0673873331264512 1.2097514495389288 1.0908397492271331 1.0 11.446467972464363 -4.329357604880282 16.267238239391602 1.1199219519044639 1.128526903674411 0.0 0.08086742854609638 0.0 0.0 0.012746699590865761 0.0 4.684275127489883e-05 4.329357604880282 0.008604951769947133 S(ph)SPVKVGEK ddPTM_A549_MK2206_60min_R1 1 SSPVKVGEK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 S(0.574)S(0.426)PVKVGEK 95.417 0.00025662 153450000.0 6212.3 7303.2 7067.6 6041.2 9115.6 7053.7 7115.8 6834.8 9286.2 8885.1 9119.1 True False 7260.784363847228 7674.901685510685 8069.891954704728 7521.294271199769 7774.707315362301 7800.117852132886 8408.648751592882 7803.653830697137 7182.890527014224 6877.949739030052 6854.575795643542 1.0592609346389974 1.1196756610946668 1.177299981106575 1.0972661905613421 1.1342360996727987 1.1379431907500808 1.2267205152121943 1.1384590474084169 1.0478971625901845 1.0034099766467484 1.0 12.74285167036635 -8.877766668722055 2.9821129338725596 1.0195592709083907 1.1391112179838039 0.6305013870983369 0.04100726683531584 0.12166119041859316 2.0664275687407314 0.007802847057482164 0.008184857758295257 1.3250532488839231e-09 8.877766668722055 0.11955194707541317 S(ph)SPVKVGEK ddPTM_A549_PD325901_60min_R1 2 SSPVKVGEK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 S(0.871)S(0.129)PVKVGEK;S(0.832)S(0.168)PVKVGEK 109.6 0.00011049 491440000.0 37951.0 35722.0 42710.0 38800.0 45686.0 37872.0 43810.0 40391.0 42292.0 39326.0 41992.0 True False 41803.75758195045 38732.4183063699 45608.55743609399 41196.587878806546 42477.1729681438 37563.58298842157 45477.213523751874 39585.369818873485 40514.61431439166 36842.949648582864 36827.250209219965 1.135131114716911 1.0517325645093363 1.238445911030185 1.1186441465155248 1.153416905330318 1.0199942372840332 1.2348794239426089 1.074893444229051 1.1001259687927647 1.0004262995274886 1.0 15.168486058687051 -10.243678717668747 0.4417732881954796 0.9814639678427618 1.1353206794985407 0.3768127971800499 0.06342282274819262 1.1242367788691234 0.3665842837398236 0.07487528072345496 0.017733808473247657 5.705862244094437e-11 10.243678717668747 0.15385671165577885 S(ph)SPVLQHK ddPTM_A549_MK2206_60min_R1 1 SSPVLQHK 8 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.5)S(0.5)PVLQHK 142.92 0.00030302 196360000.0 3139.9 3602.9 3936.3 2988.7 5630.5 3901.1 3499.0 4517.3 5906.0 5898.4 5034.2 True False 3669.838356815335 3786.2722207698584 4494.526529699505 3720.931634167839 4802.260908678249 4313.9118126594 4134.7230082103915 5157.641108651051 4568.300429944004 4565.947343383288 3784.0692031481954 0.9698126962800192 1.000582182170408 1.1877495596434222 0.9833149010784928 1.2690732253741444 1.1400192705435717 1.0926658013469908 1.362988051159344 1.2072454769440684 1.2066236366884098 1.0 11.885722757622107 -5.6598246202493945 6.237835913422651 1.1279848687604785 0.9785560434896138 0.23967854298941305 0.10875223270786252 0.2631113706716334 13.671356738247477 0.016332167233967663 0.06490059690044372 2.1886452791337225e-06 5.6598246202493945 -0.14942882527086476 S(ph)SPVLQHK ddPTM_A549_PD325901_60min_R1 2 SSPVLQHK 8 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.5)S(0.5)PVLQHK;S(0.5)S(0.5)PVLQHK 142.92 0.00030302 583220000.0 11982.8 11791.3 12605.7 12356.8 14995.2 12565.4 13530.9 13952.3 13545.099999999999 13288.4 13619.099999999999 True False 13199.285034728873 12784.994232570953 13461.198606232032 13120.051471671053 13941.988882631662 12463.071548445088 14045.82580389259 13674.010431132388 12975.846551354074 12449.368156187462 11944.03703858801 1.1050941145012771 1.070408120074145 1.1270225102904885 1.098460380630406 1.167276092462607 1.0434555341866587 1.1759697126285074 1.1448399219589904 1.086386998753651 1.0423082343069483 1.0 13.5440029239544 -9.988963103677532 0.7969658482043551 1.0065503953271777 1.1149361748054087 0.4428384283599829 0.03931531869836659 0.3085487980746972 0.3969517471562914 0.016629059963426805 0.0076189651613735865 1.025739066183726e-10 9.988963103677532 0.10838577947823103 S(ph)SPVNRPSSATNK ddPTM_A549_PD325901_60min_R1 3 SSPVNRPSSATNK 13 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 S(0.588)S(0.412)PVNRPSSATNK;S(0.848)S(0.152)PVNRPSSATNK;S(0.5)S(0.5)PVNRPSSATNK 130.21 1.2209999999999998e-08 127960000.0 11408.599999999999 12570.4 13221.1 12654.8 15240.8 12843.099999999999 13575.1 14802.7 13263.400000000001 13656.9 15403.7 True False 12566.79267343257 13629.75172382263 14118.363350932865 13436.458254863945 14170.338785905662 12738.51005171623 14091.707859079748 14507.448536006506 12705.985422715932 12794.601003298872 13509.142552099498 0.9302435461738114 1.0089279664684854 1.0450969257659277 0.9946196217150542 1.0489443524084663 0.9429547436181653 1.0431237811529135 1.0738985453782082 0.9405471423307511 0.947106817028178 1.0 13.721648486848768 -8.797808719857573 24.999997679270408 0.9719250526050415 1.0115700056939188 0.1847116789079788 0.0441139744887407 248.38273060616322 170735.20963588386 0.007726985834136881 0.008226140038882791 1.5929101520155371e-09 8.797808719857573 0.03964495308887728 S(ph)SPVPPVPER ddPTM_A549_MK2206_60min_R1 1 SSPVPPVPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.868)S(0.132)PVPPVPER 176.65 7.7e-11 50492000.0 4410.9 3388.3 3381.2 2799.4 4640.5 4214.7 3693.4 3952.2 5896.7 5192.9 5379.5 True False 5155.352083848776 3560.7499974005696 3860.705002723358 3485.2531256698426 3957.8885972331796 4660.696756508566 4364.442971856031 4512.43645310488 4561.1068650949555 4019.820283374316 4043.6216833530098 1.2749343256003882 0.8805843563604501 0.9547641458688649 0.8619137492555529 0.9787979457937965 1.1526045514336722 1.0793400851083066 1.1159393253038261 1.1279756669305527 0.9941138410458426 1.0 11.98143231130912 -7.151299863897294 9.868901196956699 1.0737808152731405 0.9746635696952249 0.12837194239301342 0.11073118835877101 0.5862142416405655 49.049066867241876 0.01578091238602269 0.027356796756915935 7.058300370584959e-08 7.151299863897294 -0.09911724557791557 S(ph)SPVPPVPER ddPTM_A549_PD325901_60min_R1 2 SSPVPPVPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.895)S(0.105)PVPPVPER;S(0.928)S(0.072)PVPPVPER 149.33 3.0255e-08 139513000.0 18631.6 18784.1 15667.8 15637.900000000001 20481.4 17275.9 16341.900000000001 17250.7 18095.8 21198.0 19114.4 True False 20523.066316141023 20367.102029804693 16731.111126135183 16603.8175667523 19042.85712099418 17135.210798206397 16963.799947130818 16906.62125558764 17335.296455839612 19859.554662326686 16763.449976164862 1.224274618012508 1.2149707881589822 0.9980708714449794 0.9904773534302583 1.1359748230865543 1.022176868280105 1.0119515953607894 1.0085406810427655 1.0341126964012677 1.1846937647419848 1.0 14.033031470788387 -5.756499346109738 24.99927104441158 1.0214121042530742 1.21962280946806 0.5266597153486229 0.061942875122129724 35.50286927832546 179657.49998711178 0.005139427106780265 0.018718757105715748 1.751865071881149e-06 5.756499346109738 0.19821070521498574 S(ph)SPVRPSSEK ddPTM_A549_MK2206_60min_R1 1 SSPVRPSSEK 10 1 B3KV94;A0A3B3ISE6;A0A3B3ITA8;A0A3B3ITJ7;A0A3B3ITE7;A0A3B3IT25;A0A3B3IS40;Q9UGL1;Q9UGL1-2 B3KV94 KDM5B Lysine-specific demethylase 5B 1 S(0.5)S(0.5)PVRPSSEK 62.14 0.002001 4683400.0 1344.0 1389.5 1348.0 1461.9 1854.5 1673.3 1360.4 1447.4 2042.7 1942.6 1978.1 True False 1570.834342354792 1460.2196149656454 1539.166669724089 1820.065565627184 1581.7055066412959 1850.3674953533537 1607.5670706971753 1652.5733824765955 1580.031711521608 1503.7653108057052 1486.8831772173232 1.0564611708732772 0.9820674800413182 1.0351631475208518 1.2240810801514386 1.0637725484267238 1.2444605761269592 1.0811656862684464 1.111434581948367 1.06264684121224 1.0113540416941005 1.0 10.538075585535912 -9.569294681464113 0.9511522931972817 1.0113351331676192 1.1001548973353 0.18814104419908995 0.07321183840625513 0.5768881711647692 1.0962786037482144 0.02266017353392003 0.015406834490995542 2.6959095584920963e-10 9.569294681464113 0.08881976416768067 S(ph)SPVRPSSEK ddPTM_A549_PD325901_60min_R1 2 SSPVRPSSEK 10 1 B3KV94;A0A3B3ISE6;A0A3B3ITA8;A0A3B3ITJ7;A0A3B3ITE7;A0A3B3IT25;A0A3B3IS40;Q9UGL1;Q9UGL1-2 B3KV94 KDM5B Lysine-specific demethylase 5B 1 S(0.5)S(0.5)PVRPSSEK;S(0.5)S(0.5)PVRPS(0.001)SEK 79.492 0.0003503 14562000.0 4959.0 5650.7 5178.2 4960.2 5841.4 5116.7 4600.0 5133.9 5387.0 6097.700000000001 6604.700000000001 True False 5462.434029377149 6126.904320133375 5529.623791046172 5266.58028856846 5431.120215736006 5075.0312916364755 4775.055517216585 5031.500337033363 5160.603123797124 5712.69018136001 5792.363770642865 0.9430405695619668 1.0577554453996907 0.9546402833108784 0.9092281661004775 0.9376345186160905 0.8761589383177195 0.8243707933914215 0.8686437068290244 0.8909321527685017 0.986245064633775 1.0 12.499936493716948 -5.99147441738282 23.87095525346014 0.9250959206811222 1.001848021868727 0.2608631785334864 0.05496874519324861 143.65822239766175 402217.49392602063 0.00888111036032195 0.02753793879101748 1.019824832232947e-06 5.99147441738282 0.07675210118760467 S(ph)SPVTK ddPTM_A549_MK2206_60min_R1 2 SSPVTK 6 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.903)S(0.097)PVTK;S(0.87)S(0.13)PVTK 113.5 0.020963 117383000.0 25352.0 18538.6 14102.2 9894.099999999999 9672.4 11483.8 11433.5 12541.8 6574.9 22311.0 24188.0 True False 29630.797803109133 19482.135555237215 16102.104013192169 12318.154944163023 8249.6027729508 12699.008093670509 13510.818952378824 14319.638557651637 5085.695647957808 17270.929604337547 18181.452045160826 1.6297266978187073 1.0715390336726476 0.8856335551855938 0.6775121653411408 0.4537372896542944 0.6984595103915519 0.7431100067706014 0.7875959808976286 0.2797188934814157 0.9499202572730915 1.0 14.150179803212298 -5.235809936809147 1.1831340770516534 0.6574304109993112 2.122169770640903 0.657033822263736 0.1964960270963969 0.9134428331074204 0.9979369400830465 0.03768332259737082 1.6663180910470279 5.810186369508563e-06 5.235809936809147 1.4647393596415919 S(ph)SPVTK ddPTM_A549_PD325901_60min_R1 2 SSPVTK 6 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.929)S(0.071)PVTK;S(0.977)S(0.023)PVTK 107.29 0.026774 223758000.0 21969.5 19068.1 18597.2 16772.7 19730.6 15499.5 12310.5 14542.599999999999 16208.7 19810.3 21777.2 True False 24199.8274669089 20675.03570650277 19859.317826048395 17808.71158543451 18344.790722874786 15373.277210842842 12778.982814064086 14252.536434550993 15527.504706272583 18559.474277153047 19098.742457044813 1.2670900988029443 1.0825338764059056 1.0398233219131678 0.9324546694887517 0.9605234880848439 0.8049366205874049 0.6691007453922914 0.7462552294532756 0.813011890243332 0.9717642048368033 1.0 14.221190027720795 -5.576492688939777 0.9207797303991573 0.8730807070527051 1.3503699725936995 0.6456355715397164 0.09622091880888575 0.8529707669940794 0.7339212064613071 0.018139594664933943 0.36216938314348324 2.6515957304930042e-06 5.576492688939777 0.4772892655409944 S(ph)SPVTVNQTDKEKEK ddPTM_A549_MK2206_60min_R1 1 SSPVTVNQTDKEKEK 15 2 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.5)S(0.5)PVTVNQTDKEKEK 82.102 6.196600000000001e-05 6134700.0 2063.6 2293.0 2028.6 1983.7 2769.9 1973.5 1829.2 1995.6 3155.8 3475.4 3034.6 True False 2411.885229823922 2409.703905805126 2316.2859838295904 2469.706589051678 2362.4513792643415 2182.334460096723 2161.5419624516844 2278.482411268686 2441.016338777055 2690.304726229873 2281.025069300687 1.0573690146085744 1.0564127234883434 1.01545836343645 1.082717863249454 1.0356972446552803 0.9567340970810898 0.9476186787874131 0.9988853002686287 1.0701400750169825 1.179427952124464 1.0 11.155466587145996 -5.752086037409023 23.335961595417213 1.0232584863336611 1.0568909239312732 0.008598364075919185 0.06151135130340353 186.644473096602 465638.915068755 0.006308104452303099 0.023705649752448994 1.7697583194991047e-06 5.752086037409023 0.03363243759761203 S(ph)SPVVNDGVVR ddPTM_A549_MK2206_60min_R1 1 SSPVVNDGVVR 11 0 H0Y8R1;F5H5I6;H0YAK1;Q12849-5;Q12849;H0YAM1 H0Y8R1 GRSF1 G-rich sequence factor 1 1 S(0.5)S(0.5)PVVNDGVVR 51.841 0.023842 6475000.0 273.02 374.0 489.13 216.69 929.79 353.25 409.53 394.72 789.52 752.38 489.45 True False 319.09910130186427 393.03500251684153 558.4959889926884 269.7790597275838 793.0191226853655 390.6306805316279 483.93629995781697 450.6727687793025 610.6949806043664 582.4168354493963 367.9060568672051 0.867338537503454 1.068302614704456 1.5180396695515026 0.7332824635310637 2.1554935230968595 1.0617674627537463 1.3153800839231433 1.2249669728649557 1.65992097494822 1.5830585677463267 1.0 8.523193617486402 -5.555383206435563 5.544945917773482 1.3231787366422303 0.9104922737353367 0.15153284901117492 0.3623906269668246 0.23173392302039278 19.136825290647515 0.048788764979219384 0.20908365167857196 2.783663875912239e-06 5.555383206435563 -0.4126864629068936 S(ph)SPYGR ddPTM_A549_MK2206_60min_R1 2 SSPYGR 6 0 P79522-2;P79522 P79522-2 PRR3 Proline-rich protein 3 1 S(0.929)S(0.071)PYGR;S(0.5)S(0.5)PY(0.001)GR 94.539 0.035816 9274700.0 2591.1 2505.7 2089.9 2296.27 2954.3999999999996 2342.8 2473.8 2436.5 3610.3 3900.3 4062.3999999999996 True False 3028.414333687129 2633.2294272899703 2386.27924559078 2858.8562530834774 2519.8116736700126 2590.7135409752213 2923.257438614136 2781.8813364683074 2792.572814464415 3019.2195211240073 3053.5939634637566 0.9917541002248819 0.8623377760096965 0.7814657987088672 0.9362267175301251 0.8251953939585788 0.848414547570208 0.9573170086104777 0.9110187437339443 0.9145200206306212 0.9887429557593317 1.0 11.57629252432089 -9.961622442923506 0.3874746258284962 1.0150109845499888 0.8732343405737227 0.345208992511955 0.05654099512982007 1.2140341113911455 0.3464028303875563 0.06905361924108275 0.02110165379751673 1.0923896006335805e-10 9.961622442923506 -0.1417766439762661 S(ph)SPYGR ddPTM_A549_PD325901_60min_R1 2 SSPYGR 6 0 P79522-2;P79522 P79522-2 PRR3 Proline-rich protein 3 1 S(0.91)S(0.09)PYGR;S(0.848)S(0.15)PY(0.003)GR 78.149 0.044201 13760600.0 5605.4 5232.9 4749.0 5283.8 5933.7 5555.4 4976.5 4841.5 6032.6 6661.1 6232.7 True False 6174.456081522617 5673.894847864147 5071.295698056902 5610.168325619537 5516.937382153718 5510.158664287 5165.883430745292 4744.932484416726 5779.070800931603 6240.517009209563 5466.117412340574 1.1295871668586668 1.038011886655505 0.9277692584150675 1.0263534246362411 1.0092972700693201 1.0080571361030402 0.9450736310717622 0.8680626716331292 1.0572533235170707 1.1416726971727074 1.0 12.416300733982084 -4.110350609746687 14.068330923363387 1.0104375724187773 1.0099804061115993 0.0 0.07752868827352931 0.0 0.0 0.008805267269656974 0.0 7.756206984094377e-05 4.110350609746687 -0.0004571663071779586 S(ph)SPYGTLKPEEMSGPGLAEPK ddPTM_A549_MK2206_60min_R1 4 SSPYGTLKPEEMSGPGLAEPK 21 1 Q5JSZ5;Q5JSZ5-5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(0.432)S(0.432)PY(0.061)GT(0.073)LKPEEMS(0.002)GPGLAEPK;S(0.496)S(0.496)PY(0.002)GT(0.003)LKPEEMS(0.003)GPGLAEPK;S(0.481)S(0.481)PY(0.017)GT(0.02)LKPEEMS(0.001)GPGLAEPK;S(0.5)S(0.5)PYGTLKPEEMSGPGLAEPK 147.39 2.4962e-22 18767700.0 5295.9 5501.9 6479.3 6327.5 8874.6 6127.700000000001 7013.200000000001 6165.5 10081.1 9697.6 10001.7 True False 6189.718447676147 5781.923209485054 7398.162168503918 7877.737784052268 7569.158096111534 6776.129146761938 8287.407659668797 7039.478506051855 7797.74694620868 7506.905424724295 7518.001857122742 0.8233196220631221 0.7690771190761434 0.984059635672305 1.0478499385563071 1.0068044993817507 0.901320493867937 1.102341794690713 0.9363496630933229 1.0372100319210351 0.9985240184015206 1.0 12.876133556422564 -5.809339576784468 5.729800551618142 1.010638155262194 0.795866274956126 0.6950569945424498 0.052316342260433246 0.05968549065866886 4.418617515296683 0.006516499757520746 0.021531351572557603 1.5511736660808385e-06 5.809339576784468 -0.21477188030606786 S(ph)SPYGTLKPEEMSGPGLAEPK ddPTM_A549_PD325901_60min_R1 3 SSPYGTLKPEEMSGPGLAEPK 21 1 Q5JSZ5;Q5JSZ5-5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(0.5)S(0.5)PYGTLKPEEMSGPGLAEPK;S(0.5)S(0.5)PYGTLKPEEMSGPGLAEPK;S(0.5)S(0.5)PYGTLKPEEMSGPGLAEPK 115.88 3.9744999999999994e-15 24211200.0 7495.6 8158.6 9169.8 7577.0 9924.1 9676.3 8323.7 9202.099999999999 9778.9 9163.8 10719.6 True False 8256.547794030921 8846.15385460919 9792.117770486886 8045.014081384469 9227.065452286384 9597.499420967037 8640.462958403416 9018.556896592203 9367.926840040776 8585.196104096107 9401.157157143136 0.8782480343664371 0.9409643628697084 1.041586435245016 0.8557472178062411 0.9814818854799726 1.0208849039051238 0.919085046018858 0.9593028545150712 0.9964652950113582 0.9132063171152234 1.0 13.198622628912547 -2.0000000000396283 0.17109698983865174 1.0085403478684078 0.6279200190050134 0.0 0.05687396357872095 61.23891802747152 0.624021784401902 0.05865062310008329 6.039033397210762 0.009999999999087525 2.0000000000396283 -0.3806203288633945 S(ph)SQEVR ddPTM_A549_PD325901_60min_R1 2 SSQEVR 6 0 I3L3R5 I3L3R5 CCER2 Coiled-coil domain-containing glutamate-rich protein 2 1 S(0.983)S(0.017)QEVR;S(0.944)S(0.056)QEVR 73.26 0.040570999999999996 4876100.0 882.49 1140.4 1059.7 1090.0 1180.0 980.15 910.91 886.44 1318.9 1072.5 1295.5 True False 972.0797351451982 1236.505510234148 1131.6176144937674 1157.3268244303902 1097.1208707790065 972.1679833676963 945.5751785190786 868.7592588012732 1263.4712195982963 1004.7821669660054 1136.1617128511257 0.8555821976308512 1.0883182352019378 0.9960004827605436 1.0186286083573015 0.9656379530919514 0.8556598698684383 0.8322540425572146 0.7646440193985916 1.11205227680811 0.8843654522071233 1.0 10.149952476656368 -8.806009637535702 24.99999924770145 1.0529135755950432 0.9295551352324749 0.028946242645333742 0.10494949259307135 139.29999029325242 78134.44318115493 0.01764244615989328 0.018781860812936143 1.5631129548319027e-09 8.806009637535702 -0.12335844036256827 S(ph)SQPSPT(ph)AVPASDS(ph)PPTKQEVK ddPTM_A549_PD325901_60min_R1 1 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 3 S(0.527)S(0.356)QPS(0.582)PT(0.697)AVPAS(0.229)DS(0.554)PPT(0.056)KQEVK 40.067 0.038945999999999995 9075200.0 2216.0 2137.9 2060.9 2371.4 3030.9 2032.0 2262.5 2435.0 2514.9 2984.9 2784.3 True False 2440.9666886670225 2318.0683359607037 2200.7650671984575 2517.8759921598407 2818.0200400373656 2015.4520657074522 2348.6006755875064 2386.432014779455 2409.2074988003315 2796.4329045937784 2441.8487511319126 0.9996387726862767 0.9493087296607413 0.9012700177184596 1.031135114733329 1.1540518382766662 0.8253795673352802 0.9618125096809614 0.9773054181481268 0.9866325658718827 1.1452113499239047 1.0 11.253758126777058 -9.129525281242563 1.7352946795381223 0.9955154936076519 0.9742853761258741 0.0374962213094886 0.08890187041951336 1.5800160459851151 9.787904113167027 0.015753460196338238 0.014828263647281641 7.421209959765243e-10 9.129525281242563 -0.021230117481777833 S(ph)SRGQEEISGALPVASPASSR ddPTM_A549_PD325901_60min_R1 1 SSRGQEEISGALPVASPASSR 21 1 H0Y9D5;H0Y8S9;Q9UBK8;Q9UBK8-1 H0Y9D5 MTRR Methionine synthase reductase 1 S(0.5)S(0.5)RGQEEISGALPVASPASSR 139.57 4.9948e-19 32801000.0 3333.7 3444.1 3743.6 3305.8 4368.3 3845.9 4340.3 3722.0 3937.2 3867.7 4269.9 True False 3672.1347698597683 3734.346394070002 3997.663208095565 3509.991757983472 4061.4856778168923 3814.580265504081 4505.472491603291 3647.761790147484 3771.7331759818126 3623.492761934186 3744.729369126225 0.9806141934140903 0.9972273096310174 1.0675439568623242 0.9373152001108359 1.0845872364775395 1.018653122693925 1.2031503608108731 0.9741055842971728 1.0072111504447352 0.9676247345958868 1.0 11.870645743819384 -3.6930840270682843 15.309103994536205 1.0176746379953114 0.5317959774537184 0.0 0.07035028442373044 0.0 0.0 0.008413504794133556 0.0 0.00020272904424835695 3.6930840270682843 -0.485878660541593 S(ph)SRS(ph)SPELTR ddPTM_A549_MK2206_60min_R1 2 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.805)S(0.302)RS(0.479)S(0.412)PELT(0.001)R;S(0.783)S(0.228)RS(0.585)S(0.389)PELT(0.014)R 50.155 0.008072 16433000.0 1942.7 2156.62 1853.5700000000002 2088.86 2413.67 1666.13 1247.24 1411.15 2553.0 3506.4 3417.9 True False 2270.5802655451303 2266.382746331205 2116.434097923204 2600.630793772488 2058.6223403693157 1842.4387707124158 1473.8473634639402 1611.1848339656265 1974.7495763032578 2714.3018046994375 2569.141100758855 0.8837896310461353 0.8821558090607701 0.8237905256733724 1.0122568951173339 0.801288158038986 0.7171419157041274 0.5736731871319195 0.6271297569019179 0.7686419308460598 1.0565016471449178 1.0 11.327070411870423 -4.3398811380428075 15.497314645157598 0.841715643393832 0.8086763688456529 0.0 0.14905302426963846 0.0 0.0 0.020892478765630156 0.0 4.572133070976124e-05 4.3398811380428075 -0.03303927454817912 S(ph)SRSQLDLFDDVGTFASGPPK ddPTM_A549_PD325901_60min_R1 1 SSRSQLDLFDDVGTFASGPPK 21 1 A0A0D9SF70;G5E9L0;Q8N6H7-2;Q8N6H7;H0YDN9;E9PQP3;Q8N6H7-3 A0A0D9SF70 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 S(0.333)S(0.333)RS(0.333)QLDLFDDVGTFASGPPK 96.679 2.7097e-07 2056200.0 1725.5 1393.5 1703.9 1894.2 1865.9 1762.9 1732.8 1965.0 1808.5 1936.9 2311.4 True False 1900.6714897540369 1510.9351354886755 1819.5369003830617 2011.2004319596736 1734.8456210055492 1748.5435268876327 1798.7426522245432 1925.80653348732 1732.49503422816 1814.603803446579 2027.1124531718206 0.937625086748423 0.7453632545764873 0.8976003761093936 0.9921504003454522 0.85582110567721 0.8625784544669383 0.8873423126625524 0.9500245191005623 0.8546615317356109 0.8951668175128964 1.0 10.985210408559775 -10.894658017395514 0.8963205784236687 1.0077546371448043 0.8838562598210179 0.02201533541435885 0.06791346074178689 0.6473724868933363 0.8227388430175284 0.05713740931871813 0.01061427300063422 1.2745062883698297e-11 10.894658017395514 -0.12389837732378639 S(ph)SRSS(ph)PELTR ddPTM_A549_MK2206_60min_R1 1 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.585)S(0.442)RS(0.357)S(0.61)PELT(0.007)R 54.806000000000004 0.058241999999999995 151190000.0 6234.7 7437.9 7198.6 6014.1 4739.5 3019.1 1815.9 2438.0 4141.3 8433.1 9224.8 True False 7286.964936219807 7816.457340160466 8219.469724536966 7487.554769983207 4042.325828377685 3338.5791580836176 2145.825524609675 2783.593966061865 3203.3021622971705 6528.056852957682 6934.0275684719445 1.0508993314870305 1.1272607821319902 1.185381748683802 1.0798276609150033 0.5829693909435226 0.4814776297203765 0.3094630794902582 0.40143970276646695 0.46196847801155827 0.9414523937920071 1.0 12.759477857115538 -6.731859177131008 7.60159297640085 0.6506236483344683 1.1193522419468809 0.5840047174887723 0.20546582373741945 0.1558802869457631 30.95696763137685 0.038263049396170486 0.07892760812565368 1.8541327408019891e-07 6.731859177131008 0.4687285936124126 S(ph)SS(ph)PVTELAS(ph)RSPIRQDR ddPTM_A549_MK2206_60min_R1 1 SSSPVTELASRSPIRQDR 18 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.815)S(0.34)S(0.822)PVT(0.039)ELAS(0.538)RS(0.446)PIRQDR 42.746 0.021022 9989600.0 602.86 563.45 454.34 232.96 1083.4 755.73 562.44 807.07 1296.8 674.6 736.03 True False 704.6080294881026 592.1271983104663 518.7722438593786 290.0352104579717 924.0332951713016 835.7008469870259 664.6280676587173 921.4746440482147 1003.0768705640671 522.2073914699522 553.2534376054122 1.2735718959791418 1.0702639298063963 0.9376755906022476 0.5242357132262931 1.670180847263591 1.5105208394259613 1.2013085188143722 1.6655561112038184 1.8130513113584577 0.9438845852095682 1.0 9.111796699923692 -6.77649021525731 24.99990725770936 1.4260578372265422 0.9589413730745976 0.3287238074231482 0.3073625477555215 232.68887309060608 386503.3589748062 0.05091688731391142 0.09649125812121838 1.6730533302046052e-07 6.77649021525731 -0.46711646415194463 S(ph)SS(ph)PVTELASR ddPTM_A549_MK2206_60min_R1 1 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.994)S(0.015)S(0.979)PVT(0.012)ELASR 85.522 0.00048609 4528000.0 402.82 240.67 305.47 201.46 782.38 472.06 298.6 332.07 954.14 427.41 485.02 True False 470.8061679965458 252.91907501531614 348.7902393179656 250.8177090438831 667.2929384125187 522.0130758719323 352.8517548589949 379.1419394217241 738.028813448488 330.8577841508632 364.57614812898555 1.291379511283817 0.6937345635837767 0.9567006539181632 0.6879707033251797 1.83032527453341 1.4318355124187834 0.9678410303851184 1.0399526720754788 2.024347498419936 0.9075135217946487 1.0 8.510076367987624 -6.748950532971398 24.989054853272716 1.4363028546999388 0.8956993762610556 0.1663019494266792 0.3804093558271051 250.57931086555035 501383.4147587366 0.06256859949030401 0.12953823313001084 1.7825817955929236e-07 6.748950532971398 -0.5406034784388832 S(ph)SS(ph)PVTELASR ddPTM_A549_PD325901_60min_R1 1 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.967)S(0.066)S(0.965)PVT(0.003)ELASR 81.92 0.00085532 4050200.0 912.34 854.81 1101.3 1223.1 1195.1 855.97 658.92 862.6 773.91 1556.8 1171.4 True False 1004.9600851707904 926.8478386559563 1176.0408406548895 1298.648109138358 1111.1602988711777 848.9992641159486 683.9955611748593 845.3947663033906 741.3852540445203 1458.5033823148494 1027.3252261164096 0.9782297364290703 0.902195152123065 1.1447600144120558 1.2641061234791522 1.0816051924196286 0.8264172265344 0.665802361108724 0.8229086026624992 0.721665578920099 1.4197094992288077 1.0 10.004677260698429 -7.259379136199247 23.58495036789556 0.8421682445963385 1.0790972393022058 0.08801518806355124 0.20991868417424184 69.42377823397696 794730.7045693906 0.02181204025184977 0.036594170114742725 5.50327054772477e-08 7.259379136199247 0.23692899470586726 S(ph)SSALDSPAGPR ddPTM_A549_MK2206_60min_R1 1 SSSALDSPAGPR 12 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.911)S(0.081)S(0.008)ALDSPAGPR 149.41 4.1195e-12 5283000.0 2218.7 2123.2 2100.5 1404.8 2302.8 2114.0 1503.6 2098.0 3115.9 2872.7 3229.0 True False 2593.1623179929907 2231.261811079566 2398.3824849817875 1748.976063063869 1964.061170500713 2337.7020768403695 1776.7846570863514 2395.397924855534 2410.153625069848 2223.7550748232015 2427.1501841336303 1.068397965212284 0.919292850382892 0.9881475405436803 0.7205883156703651 0.8092046315633259 0.9631468592763701 0.7320456182321382 0.986917884403832 0.992997318758893 0.9162000313618703 1.0 11.245047665174726 -8.481118092186557 24.972148232910726 0.9963387227831698 0.8829219516063153 0.1350726659529995 0.10190439132228045 534.8035088590514 319803.8851998341 0.01577201472031639 0.0190665191349996 3.3027972005294342e-09 8.481118092186557 -0.11341677117685456 S(ph)SSAPNVHINTIEPVNIDDLIR ddPTM_A549_MK2206_60min_R1 1 SSSAPNVHINTIEPVNIDDLIR 22 0 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.353)S(0.353)S(0.295)APNVHINTIEPVNIDDLIR 123.24 6.680500000000001e-16 16929000.0 6279.9 8170.2 7931.0 7761.4 13210.0 9629.8 10474.0 11330.0 14526.0 12205.0 13530.0 True False 7339.793591185907 8586.028282254276 9055.73505755323 9662.943348422481 11266.826499181187 10648.819044256104 12376.990222347995 12936.062196669782 11235.884193255435 9447.882023259368 10170.127590996606 0.7217012299514971 0.8442399768765242 0.8904249210767106 0.9501300020047807 1.1078353145889206 1.0470683822770595 1.216994586508932 1.271966559015621 1.1047928448019 0.9289836276610112 1.0 13.312050158424645 -6.11616548140729 1.148376525953859 1.0842462411255542 0.7463703418123754 0.6448659009064622 0.09275437537792688 0.31292514499238444 0.6806265529765461 0.01458631773115676 0.08710611049846635 7.653049433621527e-07 6.11616548140729 -0.33787589931317885 S(ph)SSAPNVHINTIEPVNIDDLIR ddPTM_A549_PD325901_60min_R1 1 SSSAPNVHINTIEPVNIDDLIR 22 0 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.36)S(0.36)S(0.28)APNVHINTIEPVNIDDLIR 170.53 1.2915e-40 10395000.0 981.25 991.16 747.5 777.87 1146.9 1107.8 1009.1 1045.9 839.59 1358.1 688.09 True False 1080.8657776419288 1074.688531676322 798.2298450826562 825.9172632290532 1066.345700590206 1098.7784440899197 1047.5018527007082 1025.038704007323 804.3049520528732 1272.3493342252038 603.4592921618924 1.791116305077892 1.7808799129204744 1.3227567384421215 1.3686379080686706 1.7670549023613893 1.8207996104485304 1.735828524485941 1.6986045576249604 1.3328238747827568 2.108426120454643 1.0 9.237112643477518 -9.270105766958837 1.0681171334905037 1.0794543973331254 1.6564000345924352 0.0 0.3535769046793506 0.2015734767399014 0.4816671715403822 0.04770216806706701 0.03953933069475321 5.369010249551433e-10 9.270105766958837 0.5769456372593098 S(ph)SSASSPEMK ddPTM_A549_MK2206_60min_R1 1 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.463)S(0.074)S(0.463)ASSPEMK 76.332 0.00052548 47362000.0 2058.9 2514.9 2197.1 1587.8 1883.0 2168.4 1799.0 1951.9 2539.0 2779.4 3120.9 True False 2406.3919847278876 2642.897667993595 2508.681817545099 1976.81107127905 1606.0131943950173 2397.858648732574 2125.8550133668177 2228.587802443047 1963.9205539498514 2151.531609622866 2345.8943975418547 1.0257887086688238 1.1266055585293844 1.069392475711533 0.8426683969024571 0.6846059209135237 1.0221511468057427 0.9062023489183464 0.9499949378702949 0.8371734703862823 0.9171476822986356 1.0 11.195922355329552 -6.237466991086011 17.07116180930085 0.9080170355474635 1.0792001153725947 0.4381464077281466 0.08930758730573553 12.22213653216849 8701.370822276467 0.013579596697089977 0.03581463955662954 5.788059793080835e-07 6.237466991086011 0.17118307982513126 S(ph)SSDMDLQKK ddPTM_A549_MK2206_60min_R1 2 SSSDMDLQKK 10 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7;Q5HYK7-3 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 S(0.333)S(0.333)S(0.333)DMDLQKK;S(0.333)S(0.333)S(0.333)DMDLQKK 52.343999999999994 0.0097725 8680300.0 3162.1 3640.0 3742.7 3601.0 5104.4 3757.6000000000004 3088.5 3971.5 6240.4 5992.9 6191.9 True False 3695.7851740774468 3825.2604523029468 4273.471138558121 4483.245161655031 4353.549521757793 4155.226737906989 3649.6404718084564 4534.4722872086495 4826.959363871074 4639.09972775019 4654.280342253648 0.7940615739291526 0.821880112715926 0.9181808624120963 0.9632520673398456 0.9353861825284382 0.8927753449193796 0.784147108345705 0.9742585219980568 1.0371011217458836 0.996738354076861 1.0 12.184342396178497 -8.482137455494538 8.410013647055552 1.0169435905291395 0.879118701815844 0.5696947085269466 0.05443239066573107 0.18807667658627686 36.411825696862 0.009482995366282406 0.011400322555772502 3.2950540623117345e-09 8.482137455494538 -0.13782488871329557 S(ph)SSDMDLQKK ddPTM_A549_PD325901_60min_R1 1 SSSDMDLQKK 10 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7;Q5HYK7-3 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 S(0.333)S(0.333)S(0.333)DMDLQKK 51.013000000000005 0.010884 8402400.0 3359.8 3394.4 3522.4 3088.3 4034.7 3854.1 3590.9 3826.7 4056.3 3773.8 4132.4 True False 3700.8844226459637 3680.458000647836 3761.451245911904 3279.0572769618097 3751.316590959368 3822.7134874227845 3727.5536645158786 3750.3734665119255 3885.827817163219 3535.5216239592614 3624.1409974419103 1.0211756179624971 1.0155394073369874 1.0378876673305244 0.9047819274350317 1.0350912377877197 1.0547916016846575 1.0285343939838327 1.0348310038597053 1.0722065780293923 0.975547481859784 1.0 11.823423369282771 -6.937813626742531 24.99994317361062 1.0361501875651837 0.9957159386370777 0.12463593494912306 0.040198875928627385 87.40541629347014 35137.65453732738 0.005689065810291248 0.01075132369922819 1.1539483573061423e-07 6.937813626742531 -0.04043424892810599 S(ph)SSDPPAVHPPLPPLR ddPTM_A549_MK2206_60min_R1 2 SSSDPPAVHPPLPPLR 16 0 O43150 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 S(0.333)S(0.333)S(0.333)DPPAVHPPLPPLR;S(0.333)S(0.333)S(0.333)DPPAVHPPLPPLR 107.98 2.0756000000000001e-07 11894800.0 1498.81 1566.3500000000001 1146.88 1452.62 1657.3000000000002 1352.19 1427.6999999999998 1573.69 2486.81 2331.73 2682.64 True False 1751.7724856136792 1646.0705245782206 1309.5248295053143 1808.5119652105907 1413.5133654120355 1495.2778482889216 1687.094609551865 1796.7653767235004 1923.5515056195468 1804.9905735431832 2016.466450902523 0.8687337618880924 0.8163143621067824 0.6494156294637095 0.8968718345902275 0.7009853125894457 0.7415337099308894 0.8366589033984478 0.891046501626303 0.9539218987544327 0.8951255165863592 1.0 10.97761368766886 -8.455864210844666 1.4094067745295014 0.9823159510388582 0.7770353688479416 0.5009182492967343 0.07197794328851136 0.17139187096088984 0.6599200790915937 0.012065676276503597 0.014542817240227069 3.5005460012076513e-09 8.455864210844666 -0.2052805821909166 S(ph)SSDPPAVHPPLPPLR ddPTM_A549_PD325901_60min_R1 2 SSSDPPAVHPPLPPLR 16 0 O43150 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 S(0.355)S(0.355)S(0.289)DPPAVHPPLPPLR;S(0.366)S(0.366)S(0.268)DPPAVHPPLPPLR 139.08 2.0615999999999997e-11 12884500.0 2345.2 2840.8999999999996 2032.75 2727.51 2776.9 2394.36 2410.84 2651.6 2637.4 3028.9 2880.1 True False 2583.2829775550094 3080.3126131394174 2170.7046389187553 2895.982098075354 2581.8601237849352 2374.861126007529 2502.585835462268 2598.711757860041 2526.559249805557 2837.6547370846924 2525.8659584581446 1.0227316176080514 1.2195075525780164 0.8593902743136104 1.146530396190595 1.0221683043549037 0.9402166089039844 0.9907833102077643 1.0288399307801603 1.0002744766978195 1.1234383707427102 1.0 11.302562365514097 -5.748069693753843 24.99999328965672 1.001621084669811 1.121119500116529 0.18519924234077179 0.0855377013121619 205.23256249198067 383757.71122902527 0.009106767167121332 0.03487077547186172 1.7862009098336701e-06 5.748069693753843 0.11949841544671802 S(ph)SSEDAESLAPR ddPTM_A549_MK2206_60min_R1 1 SSSEDAESLAPR 12 0 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 S(0.789)S(0.106)S(0.106)EDAESLAPR 262.15 1.4878999999999997e-76 141010000.0 9370.9 9686.3 9212.5 8071.3 12382.0 8794.5 8837.4 9030.4 13096.0 12462.0 12712.0 True False 10952.478823491461 10179.291296467589 10518.971027324304 10048.768862334426 10560.624202336216 9725.128152683365 10443.04118684153 10310.48685444013 10129.776910014667 9646.825544765108 9555.259566648107 1.14622514931151 1.0653076690870458 1.1008566490480234 1.0516479214660872 1.1052158372753427 1.0177774957185015 1.092910256806854 1.079037862082584 1.0601257704575466 1.0095827829143025 1.0 13.222079348909265 -14.999999999621526 0.1025614081305564 0.7363680186688831 1.1320665568207426 0.5444561287551515 0.028914276665918073 53.2526742199946 0.3913386362670457 2.973066008775781 0.1696508707112015 1.000000000871469e-15 14.999999999621526 0.3956985381518595 S(ph)SSEDKITVHFINR ddPTM_A549_MK2206_60min_R1 2 SSSEDKITVHFINR 14 1 P10109 P10109 FDX1 Adrenodoxin, mitochondrial 1 S(0.333)S(0.333)S(0.333)EDKITVHFINR;S(0.36)S(0.36)S(0.28)EDKITVHFINR 117.18 1.4252000000000001e-06 11168500.0 1401.8200000000002 1874.0700000000002 2070.9 1582.94 2582.2 1556.81 1685.75 2020.55 2405.26 2885.3 2618.1 True False 1638.412944791514 1969.452158199832 2364.5847598899227 1970.7603710608767 2202.361800619655 1721.5506008731586 1992.0289542985602 2306.9691501748553 1860.4724504109572 2233.508726072122 1967.9535141159051 0.8325465683205246 1.0007615241280738 1.2015450278317181 1.0014262821376818 1.1191127152254186 0.8747923101458817 1.0122337443491245 1.1722681118366007 0.9453843482917668 1.1349397788369593 1.0 10.942480427216001 S(ph)SSEDKITVHFINR ddPTM_A549_PD325901_60min_R1 1 SSSEDKITVHFINR 14 1 P10109 P10109 FDX1 Adrenodoxin, mitochondrial 1 S(0.333)S(0.333)S(0.333)EDKITVHFINR 188.04 1.2628e-26 9510200.0 1254.0 1373.6 1323.0 1332.5 1446.3 1317.5 1172.5 1649.6 1335.0 1686.4 1872.9 True False 1381.305156853992 1489.3580926496186 1412.7867358452913 1414.8054986729312 1344.7168774641334 1306.7707168157333 1217.120129116619 1616.6974339138342 1278.894592587555 1579.9204161971754 1642.5451732912968 0.8409541358830104 0.906737980097847 0.8601204757214559 0.8613495212664223 0.8186787793297755 0.7955767293737525 0.7409964419290702 0.9842636051672968 0.7786054310000702 0.961873342595117 1.0 10.68171733276656 -10.94459662184659 1.1115868964466085 1.0032561925093375 0.8390290539275267 0.4145089284325849 0.06271317719778396 0.3657525830495993 0.776084785413848 0.04804096643392288 0.010332644286986301 1.136065517665901e-11 10.94459662184659 -0.16422713858181082 S(ph)SSEEVLER ddPTM_A549_PD325901_60min_R1 3 SSSEEVLER 9 0 A0A087WXD1;Q96T83 A0A087WXD1 SLC9A7 Sodium/hydrogen exchanger;Sodium/hydrogen exchanger 7 1 S(0.333)S(0.333)S(0.333)EEVLER;S(0.333)S(0.333)S(0.333)EEVLER;S(0.941)S(0.03)S(0.03)EEVLER 52.79 0.023214 3442120.0 369.03999999999996 146.74 463.65 352.3 389.78 495.74 311.82 511.81 443.71000000000004 786.0699999999999 767.96 True False 406.504669127111 159.10629478407483 495.1160771539449 374.0607708686482 362.403197468001 491.7028578020729 323.68648073445115 501.601548042822 425.06241174308906 736.4374060484544 673.5057884995373 0.6035652195844347 0.23623597228249232 0.7351326233691087 0.5553935500717752 0.5380847554040732 0.7300647837006834 0.4805994042836256 0.7447620445257191 0.6311191663104483 1.0934388666341215 1.0 9.39554653487387 -14.9999999999981 0.15104774333866608 2.58902150188748 0.4418267006202697 0.6628213497566771 0.13126043873788304 26.864200565331362 0.2666116556394638 12.639573968980635 0.22254082562296407 1.0000000000043765e-15 14.9999999999981 -2.14719480126721 S(ph)SSEITLSECDAEDAGEPR ddPTM_A549_MK2206_60min_R1 2 SSSEITLSECDAEDAGEPR 19 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(0.367)S(0.367)S(0.265)EITLSECDAEDAGEPR;S(0.333)S(0.333)S(0.333)EITLSECDAEDAGEPR 187.43 4.3462999999999996e-44 4156400.0 675.19 672.71 747.54 408.76 822.1800000000001 681.87 561.71 554.79 765.72 835.0 861.2 True False 789.1455651893843 706.9480656232734 853.5524126747372 508.90621834993397 701.23841113526 754.0250308113259 663.7654361079901 633.4331814731174 592.285642603576 646.3729200673146 647.3402720891557 1.2190583518658302 1.092081083325383 1.3185529303160373 0.7861494800988439 1.0832609083197609 1.1648047608375536 1.0253733078676313 0.9785165681548653 0.9149525653519093 0.9985056514115532 1.0 9.338380448840617 -5.1879953323274 0.3791078980638606 0.9618578048958877 1.4170381949587625 0.2597503852365486 0.12039495911578314 5.378600165343483 0.4968055848428637 0.03091172586119571 1.1236554811660422 6.486414049226605e-06 5.1879953323274 0.4551803900628748 S(ph)SSEITLSECDAEDAGEPR ddPTM_A549_PD325901_60min_R1 1 SSSEITLSECDAEDAGEPR 19 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(0.333)S(0.333)S(0.333)EITLSECDAEDAGEPR 168.81 1.6119999999999999e-34 5876600.0 362.64 448.32 344.21 356.51 415.65 267.79 275.68 326.83 368.74 218.26 428.86 True False 399.45494583854196 486.101499779177 367.570160502878 378.5308130070443 386.4561779146558 265.6092070254915 286.17115325788427 320.3111192568251 353.2431401278913 204.4790263515153 376.11293876752916 1.0620611647860385 1.2924349302421378 0.9772866674232356 1.006428585646211 1.0275003544972956 0.706195346259176 0.7608649524146341 0.8516354696715327 0.9391943315893916 0.5436638979280138 1.0 8.555022127566575 -5.890022837121916 6.215681719713113 0.9360301201106193 1.1753541906171503 0.2869998792546301 0.16204302736683387 0.15512513776694967 7.87819541028258 0.01642871203543296 0.0523453782540865 1.288181811623216e-06 5.890022837121916 0.23932407050653104 S(ph)SSERRPATPAEVR ddPTM_A549_MK2206_60min_R1 1 SSSERRPATPAEVR 14 2 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 S(0.344)S(0.344)S(0.311)ERRPAT(0.001)PAEVR 59.434 0.0016791 11641000.0 942.44 1365.2 945.77 958.86 1535.8 1243.9 962.27 1145.8 1551.2 1517.5 1200.1 True False 1101.5008315542038 1434.6828487593361 1079.8944074369074 1193.7807430448618 1309.8858544619584 1375.5286723660063 1137.1020031753683 1308.2206588653341 1199.8556767573891 1174.6956960504785 902.0820489249828 1.2210650160557677 1.590412812746975 1.1971132877811113 1.323361599388324 1.4520695274038078 1.524837650860288 1.260530574275877 1.4502235804651578 1.3300959465796545 1.302204935183414 1.0 9.817114849634287 -10.349375171185786 0.6348713174870059 0.9832824702305418 1.3841478238509075 0.15102165168661308 0.14678287230338427 0.4340372360168634 0.30620421776790535 0.09047348686470268 0.02421665871442295 4.473267079659673e-11 10.349375171185786 0.4008653536203657 S(ph)SSESTSSTVNGVPSR ddPTM_A549_MK2206_60min_R1 1 SSSESTSSTVNGVPSR 16 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 S(0.348)S(0.348)S(0.301)ES(0.001)T(0.001)SSTVNGVPSR 61.732 0.0038404000000000003 2910400.0 655.98 553.1 494.61 728.93 1057.4 840.45 676.68 834.32 1326.8 1107.0 1179.2 True False 766.6933868287919 581.2504275188901 564.7531353948302 907.5178827229106 901.8578607293106 929.3858611544416 799.6239969122053 952.5874149978404 1026.281918464223 856.9279311551098 886.3720957356386 0.8649791555006927 0.6557634545528932 0.6371513026096756 1.0238565576342091 1.0174709527388943 1.048527887583266 0.9021312840952678 1.0747037497917247 1.1578454730261643 0.9667812595610968 1.0 9.791768653768452 -6.311145126464835 6.489164144198912 1.0556639041590445 0.7132090290932949 0.7089687468910597 0.0851884979908645 0.08129654240764532 8.395598319426073 0.012856089868313604 0.030383237424719583 4.884890956017671e-07 6.311145126464835 -0.3424548750657497 S(ph)SSFREMDGQPER ddPTM_A549_PD325901_60min_R1 2 SSSFREMDGQPER 13 1 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 S(0.333)S(0.333)S(0.333)FREMDGQPER;S(0.581)S(0.209)S(0.209)FREMDGQPER 43.955 0.015004 26082000.0 3975.7 4668.2 4177.1 4444.4 4735.5 4537.1 4548.5 4651.9 5208.3 4985.4 5397.9 True False 4379.310137244347 5061.6055970493235 4460.583124942829 4718.920494035254 4402.894816588124 4500.151361870711 4721.595656534704 4559.114205155047 4989.4132633511335 4670.620993186311 4733.992520107367 0.9250775362748195 1.069204392603165 0.9422454948960635 0.996816212529256 0.9300595211942299 0.9506038175507399 0.9973813090071418 0.9630590217011255 1.0539546148750512 0.9866135135085472 1.0 12.208841711222039 -8.748925824796222 24.97249041351006 1.0254785689335133 0.9736550846100259 0.14893762339810335 0.04165893142452565 223.45171924263624 445927.7390158745 0.0067191424800346865 0.007592855127851435 1.7826832143261349e-09 8.748925824796222 -0.05182348432348738 S(ph)SSFVLPK ddPTM_A549_MK2206_60min_R1 2 SSSFVLPK 8 0 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 S(0.981)S(0.019)SFVLPK;S(0.982)S(0.016)S(0.002)FVLPK 90.15 0.0026425 2855700.0 1427.63 2017.1799999999998 1457.96 1593.56 2453.3999999999996 1982.23 1800.62 1955.91 2722.7 2527.2 2380.1 True False 1668.5790417975993 2119.8458459275976 1664.7206511802174 1983.9822715376274 2092.508109999327 2191.9882629022186 2127.769346397197 2233.1662322231596 2106.0127972584705 1956.3037647833737 1789.0554825817446 0.9326591925420398 1.1848966488554604 0.9305025290651676 1.1089551390964065 1.1696161077015215 1.225220952756038 1.1893255223849526 1.2482375499056793 1.1771646087908532 1.0934841226725271 1.0 10.804982413921303 -5.245760873238139 23.386295230954016 1.1129856871774417 0.9326588637105291 0.25350105125478406 0.0932626545050084 1572.9022750292684 2346068.931873899 0.01469859873895161 0.4621531013360166 5.678571870305695e-06 5.245760873238139 -0.18032682346691264 S(ph)SSFVLPK ddPTM_A549_PD325901_60min_R1 2 SSSFVLPK 8 0 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 S(0.91)S(0.026)S(0.064)FVLPK;S(0.984)S(0.016)SFVLPK 111.61 0.0015034 4093600.0 2914.5 3226.2 3118.5 3634.0 3885.3 3685.1000000000004 3041.7 3611.7 4009.4 3788.4 3701.7000000000003 True False 3210.3778944584997 3498.0831963498854 3330.1401630638998 3858.463926587192 3612.4099315573512 3655.089767391013 3157.4535579821054 3539.661810176161 3840.8988610640768 3549.1997774676097 3246.414367009661 0.9888996078512444 1.0775220908019951 1.0257902370396914 1.1885309422596297 1.1127384009468935 1.125885162576394 0.9725972106544429 1.090329640648004 1.1831203373468335 1.0932676412274662 1.0 11.664631439531608 -4.972157512282733 1.4188924486781074 1.0891524873888485 0.8822525702086332 0.16498130410089795 0.06462137402093665 4.3394070566590575 4.551559296877102 0.011290321185345129 1.5491955982987882 1.0662093524948633e-05 4.972157512282733 -0.20689991718021528 S(ph)SSGMGGR ddPTM_A549_MK2206_60min_R1 1 SSSGMGGR 8 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 S(0.333)S(0.333)S(0.333)GMGGR 61.602 0.010756 12708000.0 1338.5 1408.5 993.73 1126.9 1961.1 1320.8 1540.1 1719.9 1992.1 1934.8 1792.8 True False 1564.4060768168813 1480.1866338100826 1134.6558566060228 1402.9905505884642 1672.6247878534602 1460.5661793239183 1819.916234622698 1963.7010919728464 1540.8925307300112 1497.7273362230417 1347.5982812371547 1.1608845889746071 1.098388632887841 0.8419837516892339 1.041104437518618 1.2411894636121952 1.0838290606775294 1.3504886878839997 1.4571858092384047 1.143436105688265 1.111404902392768 1.0 10.396174778183775 -5.252656057038522 19.16417622371731 1.1084396991027625 1.1608853229292357 0.0 0.16154546090709562 295.71789626581125 644769.2988335053 0.02383640910289667 0.3213017934189245 5.589126548212996e-06 5.252656057038522 0.05244562382647322 S(ph)SSKESLVR ddPTM_A549_MK2206_60min_R1 1 SSSKESLVR 9 1 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 S(0.456)S(0.259)S(0.236)KES(0.049)LVR 77.062 0.00054173 186540000.0 5510.5 6484.7 6236.0 4999.9 6969.0 5583.4 5646.1 5726.0 8825.8 8079.9 8831.7 True False 6440.537681209882 6814.743531606845 7120.358570029243 6224.875724454042 5943.869331778476 6174.231682039038 6671.9232856978215 6537.678035139554 6826.770391906499 6254.64497826574 6638.545147480024 0.9701730632433365 1.0265417166280335 1.0725781646197157 0.9376867349944875 0.8953572205552831 0.9300579486731008 1.005027929685839 0.9848058407226832 1.028353387714464 0.9421710388819136 1.0 12.69665139091963 -8.355446674726801 2.203777905126719 1.012935096426888 0.9750985899593325 0.0 0.05077511534693524 0.5675287809957741 5.3891702307955125 0.008752241786529653 0.010872309664967102 4.411165227205095e-09 8.355446674726801 -0.03783650646755543 S(ph)SSKGSVEEIMSQPK ddPTM_A549_MK2206_60min_R1 1 SSSKGSVEEIMSQPK 15 1 Q8IWB9;A0A087WVA8;Q8IWB9-2;J3KRZ8 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 S(0.323)S(0.323)S(0.269)KGS(0.085)VEEIMSQPK 119.31 1.9076e-07 10433000.0 2406.1 2920.2 2750.8 2432.9 4273.3 2673.6 2647.7 3260.3 4189.6 3848.7 4256.2 True False 2812.1908565028757 3068.825706817325 3140.904803469601 3028.960609217031 3644.7032308062808 2956.5185774079546 3128.752817616075 3722.457509249996 3240.662289416424 2979.2759969617637 3199.268074855858 0.8790106957915923 0.9592274342173063 0.9817573051020784 0.9467667411251557 1.1392303319159935 0.9241234270564088 0.9779589407358557 1.1635341028487305 1.0129386514640324 0.9312367476726671 1.0 11.643526169288629 -4.876459948900627 0.8247726986549458 1.0163996891369018 0.7122806682999814 0.22932361991452987 0.07301354287852438 4.045038226872145 1.2983999769022625 0.010064848770353683 1.3006282300282541 1.3290461175228043e-05 4.876459948900627 -0.30411902083692044 S(ph)SSKGSVEEIMSQPK ddPTM_A549_PD325901_60min_R1 3 SSSKGSVEEIMSQPK 15 1 Q8IWB9;A0A087WVA8;Q8IWB9-2;J3KRZ8 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 S(0.338)S(0.338)S(0.281)KGS(0.043)VEEIMSQPK;S(0.331)S(0.331)S(0.276)KGS(0.061)VEEIMSQPK;S(0.328)S(0.328)S(0.28)KGS(0.065)VEEIMSQPK 107.75 1.1256e-06 29507900.0 8346.8 8479.7 8882.3 9108.3 11402.600000000002 10634.6 9112.900000000001 9266.8 10461.6 9775.9 10762.6 True False 9194.160991410607 9194.314078509738 9485.106291608941 9670.899004549836 10601.720712834496 10547.99534349039 9459.696396270218 9081.96640433603 10021.935333193986 9158.648005634464 9438.868429742597 0.9740744941882123 0.9740907129860769 1.004898665789285 1.0245824567356074 1.123198272308539 1.117506343265984 1.002206616892973 0.9621880495460725 1.0617729665151492 0.970312074355742 1.0 13.20439819841754 -6.022308558689957 2.612952261073876 1.035738747756912 0.9741187329158609 0.17256573187046753 0.049742254376327455 0.36679793209217726 4.931769929550873 0.007169240872942492 0.025575080729712547 9.499296453220551e-07 6.022308558689957 -0.06162001484105106 S(ph)SSKSEGSPSQR ddPTM_A549_MK2206_60min_R1 1 SSSKSEGSPSQR 12 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 S(0.333)S(0.333)S(0.333)KS(0.002)EGSPSQR 92.939 7.4107e-05 175300000.0 2235.7 1985.4 1783.1 1727.1 3523.8 3125.4 3116.4 3357.8 3521.1 7235.3 7780.8 True False 2613.0315023828934 2086.448379670954 2035.9703922737565 2150.239577532464 3005.453687949635 3456.127753527387 3682.6095406650056 3833.778432831226 2723.576472041284 5600.840704865916 5848.61262084452 0.44677800903927545 0.3567424473002074 0.3481116846442412 0.3676495122739 0.5138746370785722 0.5909312135342507 0.6296552326854653 0.6555021987894355 0.4656790676021912 0.957635779279424 1.0 12.51387872091208 -14.999999999999996 0.18455904567555736 3.248927617634939 0.3664710820766806 0.8546008825113298 0.08218455115484755 15.192327403107807 0.17120416905555605 12.359266791848384 0.103328985970707 1.0000000000000082e-15 14.999999999999996 -2.882456535558258 S(ph)SSLEMTPYNTPQLSPATTPANKK ddPTM_A549_PD325901_60min_R1 2 SSSLEMTPYNTPQLSPATTPANKK 24 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7;B4DGD8;A0A0A0MQV8;B0QZ65 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.346)S(0.346)S(0.3)LEMT(0.009)PYNTPQLSPATTPANKK;S(0.352)S(0.352)S(0.295)LEMT(0.002)PYNTPQLSPATTPANKK 134.97 2.2179000000000002e-23 30511200.0 4241.8 3965.3999999999996 4198.41 4479.0 4984.7 5203.7 4938.3 5193.2 5493.3 5294.1 5406.8 True False 4672.424413351882 4299.578174572511 4483.339349690268 4755.657657452953 4634.59186828145 5161.322792481239 5126.229708841446 5089.617552013412 5262.435704465331 4959.829622503242 4741.797876529117 0.9853697974937694 0.9067400776094866 0.9454935588633663 1.0029228957633218 0.9773912741455485 1.0884738082212826 1.0810730111916376 1.0733518560978585 1.1097975581188855 1.0459808181730679 1.0 12.211218452597167 -6.863123712498998 1.6123093955343013 1.059122080779476 0.9462092658996873 0.66251727854966 0.035934226536097756 0.22670101773663956 1.186913070983113 0.007183846969427979 0.016880405937004628 1.370491314378889e-07 6.863123712498998 -0.11291281487978855 S(ph)SSLGSNR ddPTM_A549_MK2206_60min_R1 1 SSSLGSNR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.423)S(0.319)S(0.259)LGSNR 54.722 0.022359 29369000.0 1662.0 1957.6 1540.5 1061.8 2314.4 1695.2 2058.8 2029.5 2467.7 2797.6 3211.7 True False 1942.5049680012394 2057.233478414354 1758.9660643248947 1321.9410476660128 1973.9548258671405 1874.5849388173124 2432.8573104611464 2317.187840083083 1908.7698901071483 2165.6202169824173 2414.1462515893422 0.8046343367649744 0.8521577667715797 0.7286079139434437 0.5475811777334197 0.817661657642985 0.7765001551099847 1.0077505904455812 0.9598373911926723 0.7906604203662136 0.8970542756291965 1.0 11.23729736342749 -7.620071814814813 6.882667269871292 0.9111094979308362 0.7485779527897957 0.4708435968371486 0.09236228880011954 0.19664927012172842 12.046785065473825 0.016860849926648835 0.02505528263759201 2.3984362814696102e-08 7.620071814814813 -0.1625315451410405 S(ph)SSLKER ddPTM_A549_MK2206_60min_R1 2 SSSLKER 7 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 S(0.498)S(0.251)S(0.251)LKER;S(0.333)S(0.333)S(0.333)LKER 67.563 0.0065323 119642000.0 14401.3 16666.0 12484.4 7451.2 12640.5 10406.7 9525.9 11571.7 11010.599999999999 18773.6 17755.7 True False 16831.887362019388 17514.228213758488 14254.875646515888 9276.744334497076 10781.099194769102 11507.930086591616 11256.63272475317 13212.023911844983 8516.716680315176 14532.63072116853 13346.469657609636 1.2611490374477046 1.3122742315435123 1.0680633914593523 0.6950710242095998 0.8077865886146259 0.8622452515021636 0.8434164999082793 0.9899264937310222 0.6381250547000852 1.0888745184298676 1.0 13.704170557341312 -5.9953850195940435 3.774000987252767 0.8321973079541621 1.2803323939843803 0.6125051508238746 0.1280787591526306 0.10278075075583877 3.2391748160217153 0.019101220417706517 0.06153901472274538 1.01068304563832e-06 5.9953850195940435 0.4481350860302181 S(ph)SSLKER ddPTM_A549_PD325901_60min_R1 1 SSSLKER 7 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 S(0.47)S(0.265)S(0.265)LKER 65.305 0.0070056 72443000.0 5824.0 5362.4 4631.8 3973.6 5606.9 3936.5 4159.8 4135.8 4152.7 5480.7 6894.3 True False 6415.2481925978045 5814.308267344434 4946.1418012760505 4219.040247299631 5213.090686754923 3904.442449142416 4318.1034653299 4053.3082245276632 3978.176460403253 5134.647666657884 6046.344806568524 1.0610126279315921 0.9616236674143999 0.8180383288598999 0.6977836002201235 0.8621887857092793 0.6457525288502857 0.7141675844617517 0.6703733171360489 0.6579473363942973 0.8492151590626775 1.0 12.561847538940654 -5.6372097356941895 2.70040893103855 0.793566340547453 1.0507800373510137 0.44076818835955867 0.10520814677490314 0.29719474973823645 4.051815062848382 0.020292797833954622 0.11744176005909954 2.305633450373492e-06 5.6372097356941895 0.25721369680356065 S(ph)SSLVDIREEETEGGSR ddPTM_A549_MK2206_60min_R1 3 SSSLVDIREEETEGGSR 17 1 Q96Q42;Q96Q42-3 Q96Q42 ALS2 Alsin 1 S(0.344)S(0.344)S(0.312)LVDIREEETEGGSR;S(0.333)S(0.333)S(0.333)LVDIREEET(0.001)EGGSR;S(0.333)S(0.333)S(0.333)LVDIREEETEGGSR 46.926 0.017516 37575100.0 1500.47 1510.8899999999999 1079.3300000000002 799.5300000000001 1852.24 1597.77 1341.52 1005.6600000000001 2439.39 1972.13 2104.54 True False 1753.7126530305761 1587.7878474670326 1232.3952237635767 995.414885892266 1579.7779496474902 1766.844960886112 1585.2568190838533 1148.2153847045834 1886.8720599053665 1526.62446329623 1581.9246356508495 1.108594311959146 1.003706378726298 0.7790480001321515 0.6292429256484293 0.9986429909775847 1.116895786984935 1.0021064109869133 0.7258344416844955 1.192769881309202 0.9650424735108399 1.0 10.627465154787151 -8.782773819226062 24.99998636265091 1.0910302097576734 0.9207284739716592 0.11046899032906743 0.15692642909459412 299.5039658143066 350961.23746053467 0.028798620612179998 0.030672584784603593 1.649020978844419e-09 8.782773819226062 -0.17030173578601415 S(ph)SSLVDIREEETEGGSR ddPTM_A549_PD325901_60min_R1 4 SSSLVDIREEETEGGSR 17 1 Q96Q42;Q96Q42-3 Q96Q42 ALS2 Alsin 1 S(0.353)S(0.353)S(0.295)LVDIREEETEGGSR;S(0.333)S(0.333)S(0.333)LVDIREEETEGGSR;S(0.349)S(0.349)S(0.303)LVDIREEETEGGSR;S(0.347)S(0.347)S(0.306)LVDIREEETEGGSR 98.26899999999999 3.3861e-07 50787600.0 2625.4199999999996 2316.22 2151.66 2387.2 3110.2999999999997 2065.53 2914.18 2754.51 2860.22 2802.3700000000003 2868.68 True False 2891.9507056679486 2511.415988174798 2297.6845865826735 2534.651922275438 2891.8432579524933 2048.7090085042882 3025.080714600486 2699.5691371787066 2740.0149000829792 2625.4278799445456 2515.8505460608008 1.1494922503230678 0.9982373524162846 0.9132834182778778 1.007473168962312 1.1494495420168753 0.8143206327228218 1.2024087517189816 1.0730244455122995 1.0891008229297103 1.043554786692443 1.0 11.29683050621906 S(ph)SSMAAGLER ddPTM_A549_MK2206_60min_R1 1 SSSMAAGLER 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.466)S(0.202)S(0.332)MAAGLER 93.166 0.00021465 53306000.0 3164.7 3424.6 3231.6 3315.2 4315.2 3582.8 3162.7 3548.2 4943.4 4718.2 4944.8 True False 3698.8239905135497 3598.897512350734 3689.889473205017 4127.424148824983 3680.4397963108718 3961.9295179298374 3737.3216513481007 4051.1682159067695 3823.727792987672 3652.3553430677875 3716.8696904626754 0.9951449199321057 0.9682603405724304 0.9927411452365714 1.1104570492249894 0.9901987701518616 1.0659317780486022 1.005502469171277 1.089940878557537 1.0287494885277226 0.9826428277643339 1.0 11.859872394379453 -6.019205073188296 24.916193863046935 1.0268682016516901 0.9814021371960131 0.21856315493003442 0.039698015560881775 802.8328132335067 1041578.8632587565 0.005118169366673965 0.013783686949340977 9.56742192419039e-07 6.019205073188296 -0.045466064455677024 S(ph)SSMADR ddPTM_A549_MK2206_60min_R1 1 SSSMADR 7 0 O95816 O95816 BAG2 BAG family molecular chaperone regulator 2 1 S(0.674)S(0.163)S(0.163)MADR 45.489 0.025044 9383000.0 1433.3 1253.0 1256.6 1040.4 1949.9 1521.1 981.23 1705.6 1976.2 2174.3 1917.0 True False 1675.2059991794074 1316.7723480042837 1434.8047753525882 1295.2980467053305 1663.0722930169102 1682.061792375538 1159.5067897531524 1947.3740231809322 1528.593855342929 1683.124119883068 1440.9559934915374 1.1625656902403145 0.9138185718036066 0.9957311547564722 0.8989157563144816 1.1541450957063368 1.1673234991026926 0.8046788347391416 1.3514458678660328 1.0608192493367121 1.168060737097696 1.0 10.492810561228897 -6.755777038715234 24.99670935969778 1.0548264331346044 0.9873316915012813 0.05969787441171415 0.14552089697719903 370.89479864571473 1637317.5030103663 0.01906024135747767 0.03882882135607339 1.7547811530424997e-07 6.755777038715234 -0.06749474163332314 S(ph)SSMEIR ddPTM_A549_MK2206_60min_R1 1 SSSMEIR 7 0 E9PK89;Q8TBN0;Q8TBN0-2 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 S(0.401)S(0.401)S(0.198)MEIR 72.485 0.019727 1730300.0 315.68 460.83 639.77 337.86 732.66 698.25 694.43 651.37 857.74 942.28 825.26 True False 368.95906636500047 484.2842786359254 730.4990061493921 420.635715167112 624.8866845488333 772.1383515391625 820.5989421524837 743.7036922369628 663.4632595293209 729.4182935581183 620.3251659826946 0.5947833275158362 0.7806942313371108 1.177606594425626 0.6780890704325329 1.0073534314199757 1.2447316244472713 1.3228528957913925 1.1988933111537026 1.0695410986241203 1.1758644233022575 1.0 9.27688084459243 -6.964733734772068 9.828695049482457 1.0864983611973922 0.8332406436622297 0.4639727638259076 0.16830078822901845 0.36575039527117076 97.81722219911543 0.025347042918247922 0.04787286236710405 1.0845916715779339e-07 6.964733734772068 -0.25325771753516246 S(ph)SSMEIR ddPTM_A549_PD325901_60min_R1 2 SSSMEIR 7 0 E9PK89;Q8TBN0;Q8TBN0-2 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 S(0.333)S(0.333)S(0.333)MEIR;S(0.361)S(0.361)S(0.278)MEIR 58.426 0.032772 5063400.0 1232.77 867.0 923.81 854.1200000000001 1531.3000000000002 918.09 893.8199999999999 1029.96 1152.35 1392.67 1053.71 True False 1357.9199028826913 940.0651327367641 986.5053019208145 906.8770525527389 1423.7467706982147 910.6133794317699 927.8348092170709 1009.416639812011 1103.92073690507 1304.7365785254503 924.1103500180317 1.469434795158603 1.0172650189649115 1.0675189406779888 0.9813514722944543 1.5406674870273165 0.9853946332426659 1.0040303186724038 1.0923117999839682 1.1945767482027767 1.4118839579061004 1.0 9.851921327041712 S(ph)SSMKS(ph)LR ddPTM_A549_MK2206_60min_R1 1 SSSMKSLR 8 1 Q99759;Q99759-2;J3KRN4;J3QRB6 Q99759 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 2 S(0.933)S(0.065)S(0.065)MKS(0.937)LR 48.56100000000001 0.010247 21001000.0 962.15 1235.9 999.54 637.91 1421.6 1876.4 1060.3 1687.0 1379.7 1150.1 1406.5 True False 1124.5373976909693 1298.8020310442896 1141.2898019703384 794.1979786368679 1212.4845231821332 2074.9594025464867 1252.9427852544952 1926.137416220823 1067.2001529281647 890.2916112208596 1057.2272325747763 1.0636666962808605 1.2284984637419725 1.0795123004832516 0.7512084007736675 1.146853283592821 1.9626427872966539 1.1851215582132446 1.8218764678714328 1.0094330906791913 0.8421005284291052 1.0 10.046069776875445 -8.932906944180562 24.999999999944738 1.004141794540052 1.2782276832545572 0.16178727822898875 0.3277925077017925 83.8596845495891 31246.830089498388 0.05709040271315635 0.06077707788680296 1.1670596549106046e-09 8.932906944180562 0.27408588871450523 S(ph)SSMSSLTGAYASGIPSSSR ddPTM_A549_MK2206_60min_R1 1 SSSMSSLTGAYASGIPSSSR 20 0 Q96HA1;Q96HA1-2;Q96HA1-3 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.282)S(0.282)S(0.282)MS(0.13)S(0.023)LT(0.001)GAYASGIPSSSR 72.184 0.0002158 1929300.0 523.24 490.38 663.55 614.75 581.68 686.06 400.66 406.01 863.14 734.17 820.58 True False 611.5501200102092 515.33824741767 757.6513677265717 765.3637775971758 496.1156425468364 758.6584138302294 473.4547357729568 463.563160853477 667.6401681513487 568.3204870967905 616.8073391441241 0.9914767240914971 0.835493053848465 1.2283436328398452 1.2408473911143587 0.8043283713764523 1.2299763081336492 0.7675893358044638 0.7515526023031969 1.0824128147984746 0.9213906045368828 1.0 9.268676121181757 -6.750813013605445 24.99249373060318 0.9979401588898821 1.0680226888487168 0.060874340573836894 0.17414594161957328 716.4879694071305 1685120.232579297 0.024849073992015167 0.05130638070546155 1.7749535263386855e-07 6.750813013605445 0.07008252995883468 S(ph)SSPAGETEGDREPQAR ddPTM_A549_MK2206_60min_R1 3 SSSPAGETEGDREPQAR 17 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.333)S(0.333)S(0.333)PAGET(0.001)EGDREPQAR;S(0.333)S(0.333)S(0.333)PAGETEGDREPQAR;S(0.329)S(0.329)S(0.329)PAGET(0.012)EGDREPQAR 63.578 0.00080512 153774000.0 542.29 783.07 421.78000000000003 482.14 681.68 505.65000000000003 488.83000000000004 561.72 948.76 671.92 825.81 True False 633.8152942824255 822.9249182376017 481.59474625832814 600.2643216440866 581.4057750160352 559.1575473766952 577.644083481991 641.345530195353 733.8673748583933 520.1328053312931 620.7385858034667 1.0210663696087665 1.3257189693990599 0.7758414850833952 0.9670162857157032 0.9366354667053279 0.9007939254379319 0.9305754414063121 1.033197460030962 1.1822486818803053 0.8379256859923533 1.0 9.27784201801553 -8.523172818005204 24.913959894050723 1.0872019410330562 0.9800972404406709 0.0 0.1514870042326637 17.03632054445614 1443214.1511838841 0.023436806551392752 0.02670149433112258 2.9979693051796163e-09 8.523172818005204 -0.1071047005923853 S(ph)SSPAGETEGDREPQARPGEGTAPLPPPGQK ddPTM_A549_MK2206_60min_R1 3 SSSPAGETEGDREPQARPGEGTAPLPPPGQK 31 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.331)S(0.331)S(0.331)PAGET(0.008)EGDREPQARPGEGTAPLPPPGQK;S(0.345)S(0.345)S(0.31)PAGETEGDREPQARPGEGTAPLPPPGQK;S(0.345)S(0.345)S(0.306)PAGET(0.005)EGDREPQARPGEGTAPLPPPGQK 95.09899999999999 7.6696e-10 24903100.0 2101.5299999999997 2417.91 2321.5600000000004 1866.46 3482.91 2442.01 2777.35 2306.02 3939.2000000000003 3576.1 3735.01 True False 2456.2168865244544 2540.971291271381 2650.7921170360937 2323.742783788574 2970.5785527829785 2700.4218773249563 3281.958544399293 2632.9053968900666 3046.9774896097906 2768.2565262906865 2807.5039359680864 0.8748756698278677 0.9050641955360965 0.9441810866498553 0.8276899469376161 1.0580852673884713 0.9618586256385048 1.1689951712454516 0.9378100465537498 1.0852976733438233 0.9860205326252316 1.0 11.455072329869498 -6.772748869485189 24.991216584999428 1.0381590332708914 0.8931912819728732 0.5112641180180272 0.0654843793349837 117.73772791576765 260171.88564972897 0.00876053346128391 0.01666067733269847 1.687528555652375e-07 6.772748869485189 -0.1449677512980182 S(ph)SSPAPADIAQTVQEDLR ddPTM_A549_MK2206_60min_R1 3 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.333)S(0.333)S(0.333)PAPADIAQTVQEDLR;S(0.333)S(0.333)S(0.333)PAPADIAQTVQEDLR;S(0.357)S(0.357)S(0.285)PAPADIAQTVQEDLR 107.78 1.2139000000000001e-09 23329900.0 1228.3400000000001 1388.54 1535.54 1084.8 2216.88 1442.6799999999998 1385.07 1392.69 2052.4 2090.06 2704.49 True False 1435.6537619703015 1459.210755066136 1753.3026617419332 1350.5760486985232 1890.7798886831777 1595.343440026522 1636.7192903635228 1590.108072434249 1587.5346770093238 1617.9139943902874 2032.8904928732018 0.7062130336106835 0.7178009637910938 0.8624678347842972 0.664362420618966 0.9300943141363355 0.7847660489433107 0.8051192605314675 0.782190717113767 0.7809248371099268 0.7958687396405676 1.0 10.989316787280123 -14.999999999999991 0.22668949500224944 2.2148602997006765 0.7554567173748036 0.0 0.09350099092288089 21.781311011728135 0.27111463131005925 11.76882702410864 0.04139694550699875 1.0000000000000204e-15 14.999999999999991 -1.4594035823258729 S(ph)SSPAPADIAQTVQEDLR ddPTM_A549_PD325901_60min_R1 5 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.333)S(0.333)S(0.333)PAPADIAQTVQEDLR;S(0.333)S(0.333)S(0.333)PAPADIAQTVQEDLR;S(0.344)S(0.344)S(0.311)PAPADIAQTVQEDLR;S(0.333)S(0.333)S(0.333)PAPADIAQTVQEDLR;S(0.344)S(0.344)S(0.312)PAPADIAQTVQEDLR 161.19 8.054899999999999e-23 34625900.0 4673.4800000000005 4727.21 5051.79 4355.5 5659.0 5524.400000000001 5115.06 4948.06 5675.1900000000005 5236.55 6176.81 True False 5147.928249165863 5125.588576844941 5394.63484828109 4624.529342941803 5261.531362490165 5479.411118008983 5309.716407368233 4849.367061622021 5436.681500304841 4905.913339324785 5417.101528024675 0.9503104607756975 0.9461865446546222 0.9958526382370062 0.8536907272306783 0.9712816596237512 1.0115023854845544 0.9801766461084589 0.8951958970188111 1.003614473935715 0.9056343718028315 1.0 12.40330541490341 -8.884249501101106 18.660664893443762 1.0017240476008107 0.952176551191668 0.0 0.05117079827671369 1.739013666550985 274.1564634452711 0.007133062336300847 0.007593504861357788 1.3054207117088963e-09 8.884249501101106 -0.04954749640914269 S(ph)SSPATEQSWMENDFDELREEGFRR ddPTM_A549_MK2206_60min_R1 4 SSSPATEQSWMENDFDELREEGFRR 25 2 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.333)S(0.333)S(0.333)PAT(0.001)EQS(0.001)WMENDFDELREEGFRR;S(0.333)S(0.333)S(0.333)PAT(0.002)EQSWMENDFDELREEGFRR;S(0.332)S(0.332)S(0.332)PAT(0.004)EQSWMENDFDELREEGFRR;S(0.325)S(0.325)S(0.325)PAT(0.022)EQS(0.002)WMENDFDELREEGFRR 76.294 2.2414e-06 27586300.0 832.3900000000001 560.9200000000001 688.8199999999999 675.6700000000001 983.77 1137.21 632.3699999999999 840.01 1327.83 1051.76 1374.7399999999998 True False 972.8770820183821 589.4684321169694 786.5050337087138 841.2091803319788 839.0587361922386 1257.548807381096 747.2634434701356 959.0839899227345 1027.0786251087952 814.1666855209559 1033.3541171061834 0.941475014144075 0.5704418479192046 0.7611185949607008 0.814057026924817 0.8119759938073777 1.2169582397394902 0.7231436262747766 0.9281271289735258 0.9939270653752635 0.7878873970144499 1.0 10.013119016548005 -7.0227134280065515 24.233580239198986 0.9835115923128147 0.7636793792370017 0.20834802278282671 0.14631905532757628 382.1101045878405 407683.8307933456 0.018216647022465667 0.03171771259881669 9.490444898150451e-08 7.0227134280065515 -0.21983221307581302 S(ph)SSPATEQSWMENDFDELREEGFRR ddPTM_A549_PD325901_60min_R1 3 SSSPATEQSWMENDFDELREEGFRR 25 2 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.356)S(0.356)S(0.287)PAT(0.001)EQSWMENDFDELREEGFRR;S(0.357)S(0.357)S(0.285)PATEQSWMENDFDELREEGFRR;S(0.295)S(0.295)S(0.295)PAT(0.097)EQS(0.017)WMENDFDELREEGFRR 162.47 2.5577e-41 86456000.0 3225.33 3348.41 2910.74 2850.4500000000003 3330.48 3950.7999999999997 3094.4400000000005 3597.9900000000002 3623.4 3203.0800000000004 3396.1400000000003 True False 3552.7631272375475 3630.5922619459166 3108.280320101526 3026.5158226583544 3096.5585743322563 3918.6259946835667 3212.2006075425415 3526.225266881451 3471.121098712919 3000.8369821589486 2978.4363099052293 1.1928283023619841 1.2189591732654637 1.0435946908666407 1.0161425351259752 1.0396591540447562 1.3156655328339901 1.0784855787783323 1.1839183047676622 1.1654172651499022 1.007520950566988 1.0 11.540339393863997 -10.770064259571056 0.992254222306341 0.9990773800081337 1.1381785463207004 0.268913844525953 0.08592234817119793 0.6276412339510156 1.085817052882297 0.06188932372951059 0.015276772652585707 1.697992393603734e-11 10.770064259571056 0.13910116631256664 S(ph)SSPCRTPEPDNDAHLR ddPTM_A549_MK2206_60min_R1 1 SSSPCRTPEPDNDAHLR 17 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 S(0.283)S(0.283)S(0.242)PCRT(0.193)PEPDNDAHLR 76.027 0.00019119999999999999 8861800.0 835.99 445.72 472.61 485.42 731.84 540.08 465.98 608.44 804.46 1095.5 920.61 True False 977.084674006832 468.40524417595316 539.6332045833101 604.3479217913319 624.187305462586 597.2309071239109 550.6425342571813 694.6882332693524 622.2510944586442 848.0257891422065 691.9971294565693 1.4119779294086727 0.676888998865928 0.779820004466042 0.8733387698673419 0.9020085183774752 0.8630540239277018 0.7957295064064863 1.0038888944740225 0.899210513990575 1.2254758770577094 1.0 9.434622243059613 -10.536282014558024 0.5852060986322342 1.0102720484495087 0.8938570327591596 0.08303407174178101 0.19159340660192922 3.016827886723052 1.609747276201322 0.18259672502086907 0.03685816314621784 2.9088276210223044e-11 10.536282014558024 -0.11641501569034907 S(ph)SSPCRTPEPDNDAHLR ddPTM_A549_PD325901_60min_R1 2 SSSPCRTPEPDNDAHLR 17 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 S(0.331)S(0.331)S(0.331)PCRT(0.008)PEPDNDAHLR;S(0.355)S(0.355)S(0.275)PCRT(0.014)PEPDNDAHLR 141.31 1.5405e-16 27477000.0 975.5699999999999 1118.02 1173.52 1197.0 1154.72 1082.6 982.9 1128.26 1128.0 1360.9499999999998 1347.06 True False 1074.6091482233237 1212.2394690915312 1253.1621241490284 1270.9359714157597 1073.6164507677406 1073.7836645348864 1020.3047973635178 1105.7559691971528 1080.5940827256645 1275.0193847388193 1181.3801597168954 0.9096218007257222 1.026121404799985 1.0607611054254837 1.0758060908355913 0.9087815145169027 0.9089230555490341 0.863654928493147 0.9359865747721164 0.9146878537257785 1.079262567812518 1.0 10.206257573092723 -6.770487712773833 24.998902139316616 0.9427881565086756 1.0217009834721513 0.22108210796342853 0.06628729994983071 190.9345350267521 527518.6502568373 0.00863614409621543 0.01648954501744579 1.696337595015468e-07 6.770487712773833 0.07891282696347568 S(ph)SSPEAMDPPPPK ddPTM_A549_PD325901_60min_R1 1 SSSPEAMDPPPPK 13 0 Q9UK33;K7ERU0;K7ENY2 Q9UK33 ZNF580 Zinc finger protein 580 1 S(0.333)S(0.333)S(0.333)PEAMDPPPPK 54.023 0.020742 6210000.0 5057.6 5474.3 5167.1 6580.8 5708.2 5701.5 5384.4 5507.9 5422.0 6250.7 6812.9 True False 5571.043828791665 5935.638473057524 5517.77047829645 6987.281069918823 5307.275724220954 5655.068874326299 5589.306288456737 5398.040613636036 5194.1321955129015 5856.029735248862 5974.956490531408 0.932399062255963 0.9934195307470117 0.923482955405706 1.1694279416078859 0.8882534513232796 0.9464619337877959 0.935455563118189 0.9034443384132389 0.8693171579984074 0.9800957955976732 1.0 12.544712492128173 S(ph)SSPEDPERDEEVLNHVLR ddPTM_A549_MK2206_60min_R1 4 SSSPEDPERDEEVLNHVLR 19 1 Q8TE67-3;Q8TE67;Q8TE67-2 Q8TE67-3 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 S(0.356)S(0.356)S(0.287)PEDPERDEEVLNHVLR;S(0.355)S(0.355)S(0.29)PEDPERDEEVLNHVLR;S(0.355)S(0.355)S(0.291)PEDPERDEEVLNHVLR;S(0.357)S(0.357)S(0.286)PEDPERDEEVLNHVLR 148.89 2.6967e-21 125991000.0 2529.2 2802.12 2478.1800000000003 2508.55 3290.0099999999998 3135.7700000000004 2774.8100000000004 2556.32 4486.26 4347.070000000001 4755.67 True False 2956.067126996831 2944.735939177783 2829.6231881133854 3123.14486261309 2806.0538872498923 3467.5951000443397 3278.9570592775863 2918.6861884016666 3470.1292730850973 3365.063867828765 3574.705889185129 0.8269399549596738 0.8237701311558948 0.7915681110085427 0.8736788310506366 0.7849747571511528 0.9700364750384526 0.9172662481681927 0.8164828880697077 0.9707453929520702 0.9413540504155566 1.0 11.803608832939446 -8.130218556999141 0.3926112701107918 1.0070915553629578 0.8011810964072238 0.48512525349126867 0.054161872092421647 0.4999144800215506 0.18673268161811746 0.022645237476859353 0.036221021007385064 7.409372736769664e-09 8.130218556999141 -0.205910458955734 S(ph)SSPEDPGAEV ddPTM_A549_MK2206_60min_R1 1 SSSPEDPGAEV 11 0 Q9Y5U2-2;Q9Y5U2 Q9Y5U2-2 TSSC4 Protein TSSC4 1 S(0.383)S(0.383)S(0.235)PEDPGAEV 137.98 2.391e-08 10184000.0 389.51 292.3 169.01 310.2 450.4 364.99 339.87 222.83 419.31 374.97 297.05 True False 455.24976539480315 307.1768214857558 192.97815938432356 386.19901392540714 384.14675664127236 403.61299953924663 401.6199796514621 254.41683488825478 324.33695450047725 290.26401657202507 223.2842868370688 2.0388795460873617 1.3757207273161305 0.8642711142729909 1.7296291619804742 1.720437931763579 1.8076193594122645 1.7986934295314982 1.1394300892919684 1.4525740216424046 1.2999751155074857 1.0 7.802737917872545 -10.189043767760596 0.5122371621739333 0.9612277550866265 1.56906359028687 0.18444880853850754 0.32340072203871606 1.1013719566275775 0.5118339418815634 0.3089429532587374 0.08354035193219071 6.470774006535852e-11 10.189043767760596 0.6078358352002434 S(ph)SSPELVTHLK ddPTM_A549_MK2206_60min_R1 1 SSSPELVTHLK 11 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.371)S(0.371)S(0.258)PELVTHLK 120.84 3.4873e-06 112790000.0 2422.3 2787.7 2498.2 2544.0 3034.7 2544.7 2307.1 2095.8 3856.6 3564.7 3447.3 True False 2831.125020450903 2929.582022770584 2852.4823251518687 3167.2801142044987 2588.2996500427826 2813.9784649648495 2726.2702064138866 2392.8860681183155 2983.086257724694 2759.4317942083303 2591.240269360134 1.0925752636400656 1.1305713551194534 1.100817380341285 1.222302752722583 0.9988651691809045 1.0859581406782155 1.0521101569199895 0.9234520227293324 1.1512194731603644 1.0649077304165733 1.0 11.33942707839051 -6.776127574136369 24.997941617507923 1.0570120695729206 1.1335849570567786 0.3268184421426247 0.06389228958328289 295.4751264193719 502871.1070422011 0.010666200764521357 0.02021438417386274 1.6744509333040235e-07 6.776127574136369 0.07657288748385804 S(ph)SSPGKLLGSGYGGLTGGSSR ddPTM_A549_PD325901_60min_R1 2 SSSPGKLLGSGYGGLTGGSSR 21 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.344)S(0.344)S(0.312)PGKLLGSGYGGLTGGSSR;S(0.333)S(0.333)S(0.333)PGKLLGSGYGGLTGGSSR 56.54 0.0029281999999999997 10169100.0 3639.53 3469.27 3379.8599999999997 4427.41 4620.16 4485.21 3533.34 4594.79 4757.9 4230.6 4679.8 True False 4009.0124063196217 3761.6375583041254 3609.237624349254 4700.881060322345 4295.655900286722 4448.6839368266355 3667.8031872178376 4503.143308906977 4557.942009042939 3963.4791940012874 4104.2142676964095 0.9768038764140299 0.9165305008345571 0.8793979526743926 1.1453790552121512 1.04664513597575 1.0839307225847075 0.8936675689879324 1.0971998573150705 1.1105516700036218 0.9657096183299141 1.0 12.002890335995392 -6.247361830870877 24.94664460665484 1.0519971505090167 0.9234727452182888 0.35206899820441717 0.07089877190267561 597.6964509746092 1059168.0949102873 0.009598622063487461 0.025264089230264734 5.657677252984284e-07 6.247361830870877 -0.12852440529072784 S(ph)SSPPPRK ddPTM_A549_MK2206_60min_R1 1 SSSPPPRK 8 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.364)S(0.364)S(0.272)PPPRK 65.305 0.0037695999999999997 36539000.0 2207.2 1873.3 1320.6 1193.5 1882.1 1675.9 1356.2 1480.5 2080.5 2595.0 2477.0 True False 2579.721399140994 1968.6429684887673 1507.880937713376 1485.9075535782513 1605.2455832027938 1853.2426256276153 1602.6039850628547 1690.3654088410944 1609.2700718758035 2008.787697694228 1861.8925382777973 1.3855372134028583 1.0573343670573552 0.8098646440186752 0.7980630047278011 0.8621580194352165 0.995354236363081 0.8607392489714912 0.9078748499656372 0.8643195237058832 1.0788956163669385 1.0 10.862554092807109 -5.346668177379903 3.0055186973709422 0.9116283442407025 1.420940819430225 0.7373856242899064 0.08281552670623031 0.10968855504567142 1.5330997565356537 0.01071355356523338 0.11849259238200881 4.501236404277215e-06 5.346668177379903 0.5093124751895226 S(ph)SSPQPK ddPTM_A549_MK2206_60min_R1 1 SSSPQPK 7 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.82)S(0.082)S(0.098)PQPK 60.59 0.028669 8942300.0 2038.7 1832.7 1376.2 1047.7 1058.8 658.75 704.65 879.4 834.41 1626.9 2044.5 True False 2382.782718570473 1925.9766019053873 1571.365853764311 1304.3865470330406 903.0519225838785 728.4584877571403 832.6757838626614 1004.0576430495503 645.4174672789665 1259.3821600688784 1536.794224670552 1.5504891157964098 1.253242998305948 1.0224959389739834 0.8487711146316069 0.5876205858188132 0.4740117291326381 0.541826466091233 0.6533455337944113 0.41997650493339594 0.819486525815684 1.0 10.585708287087112 -5.7907040884548575 1.2316695589447073 0.6749723094508299 1.5939551273085704 0.7754531146235415 0.15860751465728845 0.350925592047889 0.773679945226966 0.0337516745195896 0.3206125508854861 1.6191829107901578e-06 5.7907040884548575 0.9189828178577405 S(ph)SSPRGEASSLNGESH ddPTM_A549_MK2206_60min_R1 2 SSSPRGEASSLNGESH 16 1 Q8IY57;Q8IY57-5;Q8IY57-3 Q8IY57 YAF2 YY1-associated factor 2 1 S(0.332)S(0.332)S(0.332)PRGEAS(0.001)S(0.001)LNGESH;S(0.286)S(0.286)S(0.286)PRGEAS(0.071)S(0.071)LNGESH 48.111999999999995 0.020859 13975200.0 787.2 554.04 741.3199999999999 673.96 803.29 794.9300000000001 514.97 580.99 1227.47 1069.8000000000002 1469.96 True False 920.0601148078073 582.2382695038258 846.450323145298 839.0802302552142 685.1271051118288 879.0489649681718 608.5333831203498 663.3471117072526 949.4500048668078 828.1314369916319 1104.928363167876 0.8326875709570496 0.5269466228874099 0.7660680559583876 0.759397856209914 0.6200647281309176 0.7955710019497568 0.5507446486174534 0.6003530489573176 0.8592864809304875 0.7494888036155977 1.0 10.109737121742437 -9.034296457180295 2.3846856375797176 0.9476721747309501 0.6799064202518909 0.2890415064876385 0.11627384597598917 0.13520968708589762 1.5636178183255662 0.01891011960418129 0.01875030957412121 9.240671738178222e-10 9.034296457180295 -0.26776575447905926 S(ph)SSPRGEASSLNGESH ddPTM_A549_PD325901_60min_R1 3 SSSPRGEASSLNGESH 16 1 Q8IY57;Q8IY57-5;Q8IY57-3 Q8IY57 YAF2 YY1-associated factor 2 1 S(0.347)S(0.347)S(0.305)PRGEAS(0.001)S(0.001)LNGESH;S(0.354)S(0.354)S(0.29)PRGEAS(0.001)SLNGESH;S(0.341)S(0.341)S(0.302)PRGEAS(0.008)S(0.009)LNGESH 73.887 0.00047333 40878000.0 1327.08 1545.67 891.86 1709.79 1997.43 1770.12 1495.3400000000001 2083.1800000000003 1720.6 1579.21 2143.86 True False 1461.8041846553388 1675.9290354293378 952.386982789857 1815.399845085172 1857.1374075594156 1755.7047296014161 1552.2459819814446 2041.6293406769043 1648.2891655476762 1479.4984110903358 1880.1788110482562 0.777481469350428 0.891366834676196 0.506540642407768 0.9655463801727624 0.9877450999056869 0.9337966789565925 0.8255842331911085 1.0858697740235859 0.8766661744415178 0.7868923968276565 1.0 10.87665415802527 S(ph)SSPVQVEEEPVR ddPTM_A549_PD325901_60min_R1 1 SSSPVQVEEEPVR 13 0 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.482)S(0.482)S(0.037)PVQVEEEPVR 54.776 0.019161 1570900.0 325.39 482.71 311.12 464.53 645.67 639.34 352.87 545.36 377.53 469.45 592.63 True False 358.4233532605425 523.3896657708925 332.23447411654314 493.22296307582513 600.3203666405772 634.1334270125011 366.298660947873 534.4823669733565 361.66372699593995 439.8088468831619 519.7402669910946 0.6896201353332584 1.0070215817622237 0.6392317378830987 0.948979700824828 1.1550391700762013 1.220096781578339 0.7047725262244291 1.0283643598900036 0.6958547373858505 0.8462089139818326 1.0 9.02164702622507 -5.237762974005795 22.121574564454896 0.8958185404237783 0.6896190131497233 0.10410239242739516 0.18109468533586487 2590.211067323436 2419925.927015004 0.02615695783302564 1.6581322310553956 5.784116424565572e-06 5.237762974005795 -0.206199527274055 S(ph)SSQIPEGFGLTSGGSNYSLAR ddPTM_A549_PD325901_60min_R1 1 SSSQIPEGFGLTSGGSNYSLAR 22 0 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 S(0.345)S(0.345)S(0.31)QIPEGFGLT(0.001)SGGSNYSLAR 75.122 0.00019291 7532900.0 1792.3 1617.8 1625.5 2086.6 2113.8 2071.7 1804.2 1933.5 2279.3 2104.1 2184.7 True False 1974.252976578477 1754.1376836695947 1735.816204925562 2215.48454298757 1965.3339802141218 2054.8287620699457 1872.8598182961216 1894.9348256985938 2183.5089474792608 1971.2467669120472 1915.995749954345 1.0304057180844584 0.9155227425276872 0.9059603628906399 1.1563097376600973 1.0257506992178622 1.0724599791617015 0.9774864157922839 0.9890078439598559 1.139620976472046 1.0288367116466823 1.0 10.903878645565726 -6.241387285007762 24.79633863769884 1.057873691596168 0.9471189179589328 0.32213534534142707 0.062262711284031824 669.409971574077 827788.4616349578 0.009667169336094643 0.025542801322454997 5.736047182233063e-07 6.241387285007762 -0.11075477363723518 S(ph)SSQPSSCCSDPSKPGGNVEGATQSLAEQMR ddPTM_A549_MK2206_60min_R1 1 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.313)S(0.313)S(0.287)QPS(0.053)S(0.017)CCS(0.017)DPS(0.001)KPGGNVEGATQSLAEQMR 75.515 4.3147e-06 15689000.0 815.86 893.67 0.0 557.06 862.93 880.13 833.86 808.1 1126.7 775.1 910.63 True False 953.5572221380816 939.1539858268067 0.0 693.5397250073732 735.9941401164587 973.2647724169894 985.3615683413306 922.6506497024583 871.5042489701842 600.004371669671 684.4954388905575 1.3930804618415344 1.3720383401663045 0.0 1.0132130699533586 1.0752360034850943 1.4218718155295154 1.4395443889858819 1.3479281194304333 1.273206802345877 0.8765644554800377 1.0 9.418897117946143 -6.815814762843748 3.645552034228174 1.1950576124957057 0.9045816132956173 0.10221528915581557 0.37762271340535436 0.4108421024450029 11.133483371711973 0.054572189378833444 0.11038320159996343 1.5282177412736031e-07 6.815814762843748 -0.2904759992000885 S(ph)SSSSNASGNGGDGKEERPEGSPTLFK ddPTM_A549_MK2206_60min_R1 1 SSSSSNASGNGGDGKEERPEGSPTLFK 27 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 S(0.321)S(0.321)S(0.291)S(0.032)S(0.032)NAS(0.004)GNGGDGKEERPEGSPTLFK 84.524 2.9416e-07 5853300.0 1953.2 2210.4 1899.0 1577.6 2422.1 2029.5 1723.2 1807.7 3133.8 2893.0 2532.9 True False 2282.852408844776 2322.899918618251 2168.3067550489945 1964.112070821154 2065.8122985364694 2244.2603429269325 2036.28313453791 2063.9470108490696 2423.9993036502733 2239.4692907242406 1903.9110255162814 1.1990331366591764 1.2200674755735252 1.1388697927525355 1.0316196736601952 1.0850361549727805 1.178763247257502 1.069526415492937 1.0840564412874238 1.2731683735026222 1.1762468207341603 1.0 10.894750344166273 -11.151157387038653 1.5440821027477087 1.0002795731716898 1.156290201955054 0.0 0.08647584285528145 0.37612373708226443 1.612552660163866 0.059093083219114294 0.012699972265436994 7.060616332409292e-12 11.151157387038653 0.15601062878336425 S(ph)SSSSNASGNGGDGKEERPEGSPTLFK ddPTM_A549_PD325901_60min_R1 1 SSSSSNASGNGGDGKEERPEGSPTLFK 27 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 S(0.174)S(0.174)S(0.163)S(0.163)S(0.163)NAS(0.163)GNGGDGKEERPEGSPTLFK 47.806999999999995 0.0037919000000000004 4440500.0 1185.5 856.06 808.48 1192.4 959.8 759.69 895.17 907.63 1248.9 1063.6 1369.0 True False 1305.851087281027 928.2031805428313 863.3483145851859 1266.0518398631175 892.386959130246 753.5033365144171 929.2361842058201 889.5266076280388 1196.4130761667398 996.4441144848878 1200.621678806015 1.0876457674657847 0.7731021327766658 0.7190843958804424 1.0544969012405063 0.7432707362220047 0.6275943120265455 0.7739625234236314 0.7408883442056855 0.9964946471369227 0.8299401319121805 1.0 10.229565907734175 -8.77508920755195 24.354847203202613 0.9983447318027229 0.8083882175076527 0.10416405650730443 0.14103800771001937 148.94564691584856 265756.7900832334 0.022239163778118128 0.02374202290022783 1.6784592137955443e-09 8.77508920755195 -0.1899565142950702 S(ph)SSTGNLLDKDDLAIPPPDYGAASR ddPTM_A549_MK2206_60min_R1 3 SSSTGNLLDKDDLAIPPPDYGAASR 25 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.254)S(0.254)S(0.238)T(0.254)GNLLDKDDLAIPPPDYGAASR;S(0.314)S(0.314)S(0.314)T(0.059)GNLLDKDDLAIPPPDYGAASR;S(0.326)S(0.326)S(0.326)T(0.023)GNLLDKDDLAIPPPDYGAASR 66.378 5.9933000000000004e-05 5510300.0 2270.87 2388.05 2498.7799999999997 2369.02 3170.23 2962.98 3127.94 2631.65 3778.0999999999995 3543.8 3438.3 True False 2654.1373385589495 2509.591544813752 2853.144577873264 2949.4300063493497 2703.8933665782884 3276.5205769330564 3696.2462092888286 3004.694446590118 2922.366382385951 2743.2531187240097 2584.475217747496 1.0269540680185618 0.9710255790345674 1.1039550924229513 1.141210403603688 1.0462059562462631 1.2677701664281051 1.4301728195754566 1.1625936383359343 1.1307387907294173 1.0614352576825623 1.0 11.335655653166183 -5.805718403906891 7.588112448336447 1.1144298213774066 0.9991546937419694 0.14899761873780548 0.11627670189412122 0.35644634700327227 51.37037412640515 0.018737631562144374 0.05963634041707368 1.5641615146177707e-06 5.805718403906891 -0.11527512763543724 S(ph)SSTKGKLELVDNK ddPTM_A549_MK2206_60min_R1 1 SSSTKGKLELVDNK 14 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.431)S(0.302)S(0.253)T(0.014)KGKLELVDNK 84.035 5.5499e-05 14989000.0 3629.7 4976.8 4712.9 4845.3 5564.1 3250.0 3828.9 3238.7 6589.7 6329.9 6412.3 True False 4242.304622355053 5230.09786236849 5381.260087346186 6032.398717513781 4745.628260718699 3593.9128428246013 4524.5615679156235 3697.7956431027706 5097.14347158855 4899.971193693525 4819.9489395230985 0.880155511102738 1.0850940389600834 1.1164558286541986 1.2515482618599372 0.984580608687578 0.7456329699584318 0.9387156637313462 0.7671856464663384 1.057509848246002 1.016602303297085 1.0 12.234802147904254 -5.233881443881881 22.038681266224227 1.0079208577097516 0.8801546353809534 0.04906755214050351 0.13875077063265423 4180.220617005312 3342743.2323969426 0.019528338082183207 1.8047004029174407 5.83604398098051e-06 5.233881443881881 -0.1277662223287982 S(ph)SSTKGKLELVDNK ddPTM_A549_PD325901_60min_R1 1 SSSTKGKLELVDNK 14 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.337)S(0.337)S(0.282)T(0.044)KGKLELVDNK 98.796 7.6742e-06 23054000.0 4735.2 4552.3 4368.2 4794.6 5261.5 5831.6 5840.5 6217.8 6183.6 5217.3 5956.2 True False 5215.914018130002 4935.938297298242 4664.65232012048 5090.7515526733505 4891.950391189613 5784.109383060819 6062.763423544233 6093.781101230262 5923.724796048241 4887.878787610014 5223.625159462662 0.9985237950470678 0.9449258219374199 0.892991395385713 0.9745629514497974 0.9365048681427273 1.1072979408912664 1.1606428942477738 1.1665808543308858 1.13402562688047 0.9357254087720213 1.0 12.350835659343764 -7.258329452661525 24.712812838477966 1.0842343779713848 0.9475003650064511 0.49072072781039067 0.06823434109846857 159.25146171740107 1265478.9128726523 0.010293097425906802 0.017349215926241276 5.516587961272164e-08 7.258329452661525 -0.1367340129649337 S(ph)SSVGSSSSYPISPAVSR ddPTM_A549_PD325901_60min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.333)S(0.333)S(0.333)VGSSSSYPISPAVSR;S(0.333)S(0.333)S(0.333)VGSSSSYPISPAVSR 122.3 6.9325e-11 30078000.0 2983.9 3031.8 2638.7 2658.1 2904.3 3166.8 2714.8 3121.3 3085.0 2937.5 3441.1 True False 3286.82333136892 3287.300426103025 2817.778049792116 2822.284800016898 2700.3119872910756 3141.0106307491924 2818.113199595561 3059.0432228875184 2955.3481783764864 2752.025748683114 3017.866514930151 1.0891215085585038 1.0892795986303292 0.9336987026602579 0.935192059043811 0.8947751578580256 1.0408050240823497 0.9338097578715429 1.0136443105596804 0.9792839291451857 0.9119110255765605 1.0 11.559313279225403 -5.746547859452912 24.857798686854306 0.9783518692547867 1.089200658451674 0.5148149760753591 0.045582699421500596 129.7368004544556 216560.1376882378 0.005559705809737923 0.02135218467524937 1.79247101034616e-06 5.746547859452912 0.11084878919688734 S(ph)SSVKSLSQEMRCTIR ddPTM_A549_MK2206_60min_R1 1 SSSVKSLSQEMRCTIR 16 2 A2A2Y4-2;A2A2Y4 A2A2Y4-2 FRMD3 FERM domain-containing protein 3 1 S(0.312)S(0.312)S(0.282)VKS(0.072)LS(0.01)QEMRCT(0.011)IR 45.257 0.021051 9840700.0 462.69 860.48 702.9 786.66 904.63 782.74 726.2 547.78 1142.7 785.98 1207.0 True False 540.7807603155794 904.274756592758 802.5817894280879 979.3917353145093 771.5601253561147 865.5690272592392 858.1411399149434 625.4294925058929 883.8802745169337 608.4265721131828 907.2685884946716 0.5960536572888916 0.9967001702253564 0.884613222154777 1.079494813040429 0.8504208512677347 0.9540383500936368 0.9458512625668659 0.6893542887267788 0.9742211796216339 0.6706135094158571 1.0 9.825385900315768 -5.257380927808382 24.74981704628422 0.9553308280923003 0.5960534962626405 0.24467561576661 0.13051868296934782 210.91655413126148 1286181.4243651868 0.013210322002731876 0.13937310330638464 5.528649682853146e-06 5.257380927808382 -0.3592773318296598 S(ph)SSVKSLSQEMRCTIR ddPTM_A549_PD325901_60min_R1 1 SSSVKSLSQEMRCTIR 16 2 A2A2Y4-2;A2A2Y4 A2A2Y4-2 FRMD3 FERM domain-containing protein 3 1 S(0.342)S(0.342)S(0.304)VKS(0.009)LS(0.002)QEMRCT(0.002)IR 54.805 0.006518600000000001 6547500.0 881.87 1032.6 1129.9 1087.3 883.69 1204.7 1102.2 1009.1 853.58 1008.6 1235.3 True False 971.3967932016184 1119.620825910015 1206.58180864066 1154.4600515625345 821.6226629649999 1194.8893226170114 1144.144824146982 988.9727088763647 817.7070010044088 944.9168238712476 1083.3659312118843 0.8966469825343187 1.03346504966939 1.113734310706026 1.0656233672320878 0.7583980991961867 1.1029415714414923 1.056101905352616 0.9128704165268251 0.7547837507588024 0.8722046693994119 1.0 10.08130491262681 -8.421034194086454 6.041289802960434 0.881775305533629 1.0054295721885507 0.21877698221790876 0.10928012124624008 0.32109087473230347 16.083974560895033 0.020920019260273794 0.02527834773999811 3.792851208622661e-09 8.421034194086454 0.12365426665492163 S(ph)SSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK ddPTM_A549_MK2206_60min_R1 1 SSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK 34 1 A0A2R8YFC5;A0A2R8YHG5;Q9BZV2 A0A2R8YFC5 SLC19A3 Thiamine transporter 2 1 S(0.333)S(0.333)S(0.333)VNPVLEETHEGEAPGCEEQKPTSEILSTSGK 124.88 7.726e-22 25423000.0 944.69 1245.0 1095.1 1046.0 1581.8 998.31 1228.1 1373.9 1720.2 1752.2 2193.9 True False 1104.1305765469858 1308.3651821750468 1250.4016468952893 1302.2700469567249 1349.1193153977886 1103.950501575454 1451.229873216113 1568.6545323922862 1330.577446594932 1356.3768030442498 1649.0940814403139 0.669537650382349 0.7933841961474536 0.7582354827222424 0.7896881455176445 0.8180972393154621 0.6694284540826603 0.880016422076182 0.9512219769912873 0.8068535698295696 0.8224981329504223 1.0 10.68745799208244 -14.999999999968018 0.10930672058610652 1.6834193147458791 0.663665694500812 0.2893938573753606 0.08189442520917323 46.30230943302034 0.3588317708165346 7.125038482308307 0.34269245620622246 1.0000000000736402e-15 14.999999999968018 -1.019753620245067 S(ph)SSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK ddPTM_A549_PD325901_60min_R1 1 SSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK 34 1 A0A2R8YFC5;A0A2R8YHG5;Q9BZV2 A0A2R8YFC5 SLC19A3 Thiamine transporter 2 1 S(0.336)S(0.336)S(0.327)VNPVLEETHEGEAPGCEEQKPTSEILSTSGK 276.06 9.012799999999997e-184 43959000.0 1936.9 1987.3 2593.0 2224.5 2095.0 2701.6 2118.5 2186.6 1931.1 2270.9 2854.6 True False 2133.532662129583 2154.776745429956 2768.9765729756887 2361.9023127939477 1947.8544273576417 2679.5990653126264 2199.120676787681 2142.9865476454847 1849.9425825811438 2127.514986445782 2503.5022968003277 0.8522191750558428 0.8607049205362942 1.1060411554303977 0.9434392434201655 0.7780517836341323 1.0703401665488241 0.8784176789445449 0.8559954390233193 0.7389418355819029 0.8498154721746863 1.0 11.289732063663113 -7.963104537490274 24.99681993735149 0.8715082502274065 0.9362243311333314 0.10058775565796307 0.10420725698292409 425.82443137638336 288496.9022387584 0.019489975565052428 0.026929240221445924 1.088668012361672e-08 7.963104537490274 0.06471608090592484 S(ph)SSVPHPFQVTLLR ddPTM_A549_MK2206_60min_R1 2 SSSVPHPFQVTLLR 14 0 Q5VV41;Q5VV41-2 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 S(0.455)S(0.455)S(0.09)VPHPFQVTLLR;S(0.468)S(0.468)S(0.064)VPHPFQVTLLR 96.096 1.4615e-05 5670200.0 527.09 525.27 609.87 440.42 789.02 454.39 496.76 622.58 733.44 614.57 676.78 True False 616.0499058867464 552.0039993904314 696.3587365464615 548.3229197712049 672.9562032084741 502.47324820032907 587.0148618344083 710.8326215712857 567.3170110630087 475.73821016259774 508.7168478222234 1.2109878187129193 1.0850908550670515 1.3688533012569137 1.0778548462047834 1.3228502379847384 0.9877267685380922 1.1539127598139762 1.3973050521410957 1.115192102427211 0.9351729006011801 1.0 8.990719064331225 -9.52341609930306 1.350387142515701 1.0276391006074572 1.1929665150272315 0.30313139767956543 0.12541497910207863 0.361551388408648 1.3513601991617703 0.028662487995072785 0.02220297377562185 2.996290385345465e-10 9.52341609930306 0.16532741441977428 S(ph)SSVPHPFQVTLLR ddPTM_A549_PD325901_60min_R1 2 SSSVPHPFQVTLLR 14 0 Q5VV41;Q5VV41-2 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 S(0.459)S(0.459)S(0.082)VPHPFQVTLLR;S(0.464)S(0.464)S(0.073)VPHPFQVTLLR 90.714 2.0855e-05 17186900.0 1664.38 1828.28 1384.1 1637.02 1962.63 1934.01 1704.6299999999999 2133.3 2050.0 1992.58 1956.71 True False 1833.3466323482032 1982.3555719492178 1478.0333492694374 1738.1350074578334 1824.781639505933 1918.2600637789717 1769.500627459327 2090.7496579585254 1963.8456290670329 1866.768158744169 1716.04707460666 1.0683545104777674 1.155187174806145 0.861301167748106 1.0128714026427486 1.063363392827785 1.1178365047000016 1.0311492345656772 1.2183521588052892 1.1444007907050984 1.0878303901844046 1.0 10.744873414055524 -6.904181456240099 4.860226470631381 1.0825877960489514 1.0225557293842533 0.13082132394946921 0.08464466676618286 0.45240639743561095 18.14590299549119 0.013617127699310973 0.0262069731255862 1.2468624432811756e-07 6.904181456240099 -0.06003206666469807 S(ph)SSVTSIDKESR ddPTM_A549_MK2206_60min_R1 1 SSSVTSIDKESR 12 1 H0Y332;Q5JRH0;Q5T5C0-2;Q5T5C0;Q5T5C0-3 H0Y332 STXBP5 Syntaxin-binding protein 5 1 S(0.437)S(0.119)S(0.437)VT(0.003)S(0.003)IDKES(0.001)R 43.316 0.044233999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)STDFSELEQPR ddPTM_A549_PD325901_60min_R1 2 SSTDFSELEQPR 12 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.46)S(0.46)T(0.034)DFS(0.046)ELEQPR;S(0.864)S(0.135)TDFSELEQPR 228.02 2.7936999999999994e-84 600330.0 322.79 547.56 400.88 665.77 529.55 429.63 519.81 421.35 450.72 350.73 524.28 True False 355.5594031745612 593.7048028619871 428.08612748727154 706.8931008266245 492.35623484832456 426.1312357233724 539.5916540009465 412.94584370731934 431.77780582102105 328.5848479440438 459.7968836847459 0.7732966790143496 1.291232768052107 0.9310331206611299 1.5374029835993779 1.0708124659363776 0.9267814786138134 1.1735435213843486 0.8981049205858702 0.9390620535763878 0.7146304370547539 1.0 8.844852877866924 -7.00210549732897 24.992962217869827 0.9793529736158075 1.151836082557892 0.1437886190106823 0.20874994947705905 115.1205827919338 1366557.7425609082 0.025192200796622308 0.047088875545295464 9.951636462410735e-08 7.00210549732897 0.1724831089420844 S(ph)STDSLPGPISR ddPTM_A549_PD325901_60min_R1 1 SSTDSLPGPISR 12 0 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 S(0.494)S(0.494)T(0.012)DSLPGPISR 128.1 8.9301e-08 7141000.0 3009.0 4018.0 3860.0 4167.6 4590.9 3993.5 3229.9 3419.6 4292.9 3870.3 4375.3 True False 3314.471464891278 4356.610961172224 4121.962812065626 4425.023186693663 4268.4510217452025 3960.978260040707 3352.8156119690993 3351.3933953756955 4112.484341961882 3625.928597490472 3837.165837311873 0.8637811357179265 1.1353720808231338 1.0742206583787548 1.1532009233652547 1.1123968060591998 1.0322666332335457 0.873773966026424 0.8734033235643301 1.071750483644169 0.944949671508234 1.0 11.905825402351624 -7.5132325736934815 24.558180857827917 1.006793146491911 1.0762186036415544 0.15734001980077195 0.09508135675475847 686.438764057802 1747604.4610615682 0.014788911966046498 0.02266692551133249 3.067378903519628e-08 7.5132325736934815 0.06942545714964332 S(ph)STGEASENGLEDIDR ddPTM_A549_MK2206_60min_R1 1 SSTGEASENGLEDIDR 16 0 H3BS87;H3BMJ8;Q9H7D3;H3BSP8;H3BTU3;Q9BQ70 H3BS87 TCF25 Transcription factor 25 1 S(0.482)S(0.482)T(0.036)GEASENGLEDIDR 99.566 1.9738e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)STGEASENGLEDIDR ddPTM_A549_PD325901_60min_R1 1 SSTGEASENGLEDIDR 16 0 H3BS87;H3BMJ8;Q9H7D3;H3BSP8;H3BTU3;Q9BQ70 H3BS87 TCF25 Transcription factor 25 1 S(0.497)S(0.497)T(0.007)GEASENGLEDIDR 89.541 4.6766e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)STLEPEDDDEDEEDTVTR ddPTM_A549_MK2206_60min_R1 1 SSTLEPEDDDEDEEDTVTR 19 0 Q9NVM1 Q9NVM1 EVA1B Protein eva-1 homolog B 1 S(0.466)S(0.466)T(0.068)LEPEDDDEDEEDTVTR 51.147 0.014931 2473500.0 153.13 252.5 0.0 0.0 320.79 247.17 0.0 150.44 0.0 0.0 165.53 True False 178.97460033094444 265.3511714853007 0.0 0.0 273.60221594794336 273.325365341833 0.0 171.76533070317745 0.0 0.0 124.42433260441007 1.438421220228437 2.132630860307268 0.0 0.0 2.1989446133323756 2.1967195613645214 0.0 1.38048022527299 0.0 0.0 1.0 6.959124838385878 -7.780090160621577 24.999992768065386 0.557316462675242 1.2832605365287877 0.20457920233337 0.8266735087075545 368.80263446235074 494351.243112126 0.13446350875852628 0.1859615662072285 1.6592424088018956e-08 7.780090160621577 0.7259440738535456 S(ph)STLEPEDDDEDEEDTVTR ddPTM_A549_PD325901_60min_R1 2 SSTLEPEDDDEDEEDTVTR 19 0 Q9NVM1 Q9NVM1 EVA1B Protein eva-1 homolog B 1 S(0.5)S(0.5)T(0.001)LEPEDDDEDEEDTVTR;S(0.5)S(0.5)TLEPEDDDEDEEDTVTR 186.83 1.5375999999999997e-43 6726700.0 232.99 798.73 720.36 554.2 819.78 652.46 679.13 540.64 871.24 461.21 669.79 True False 256.64297328182727 866.0417802431791 769.2479614765791 588.4316753204791 762.2014808874696 647.1465820824234 704.9746637841956 529.8565110761247 834.6248126187129 432.0891218894088 587.410076148634 0.4369059771063379 1.4743393336413286 1.3095586758064637 1.001739158406242 1.2975628301864672 1.1016947246214315 1.2001405702918415 0.9020214882082711 1.420855457725457 0.7355834355488245 1.0 9.198224202943424 -5.247506082873339 24.57682195520313 1.1913950918467469 0.43690533161206707 0.4494693449609005 0.2195386152896654 1077.0646335642653 1899785.363688515 0.025897415741751778 0.727418571888486 5.655798353338976e-06 5.247506082873339 -0.7544897602346798 S(ph)STPEEVK ddPTM_A549_MK2206_60min_R1 1 SSTPEEVK 8 0 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 S(0.881)S(0.115)T(0.004)PEEVK 53.166000000000004 0.039472 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)STPLHSPSPIR ddPTM_A549_MK2206_60min_R1 2 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.364)S(0.364)T(0.271)PLHSPSPIR;S(0.363)S(0.363)T(0.274)PLHSPSPIR 85.45 0.00012146 13595700.0 1087.77 1514.58 1204.02 1270.15 1520.7 1207.03 904.23 889.19 1945.01 1777.73 1889.39 True False 1271.3589825768397 1591.6656527057692 1374.7681407130547 1581.3368070192012 1297.0070444591092 1334.7571134383313 1068.5168864572968 1015.2354055301671 1504.4683405427336 1376.1395583128947 1420.2023184887714 0.8951956816474466 1.1207316253359245 0.9680086582142303 1.113458826557819 0.9132551239877192 0.9398358924372396 0.7523694846480036 0.714852660295945 1.0593338153000829 0.968974307672752 1.0 10.471880751778606 -4.259468313596863 14.167565847515686 0.9829945605816005 0.9612933698290758 0.0 0.12864798425393478 0.0 0.0 0.017729788358517143 0.0 5.502140630161927e-05 4.259468313596863 -0.021701190752524746 S(ph)STPLPTISSSAENTR ddPTM_A549_MK2206_60min_R1 1 SSTPLPTISSSAENTR 16 0 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 S(0.767)S(0.232)T(0.001)PLPTISSSAENTR 190.18 1.9206999999999998e-34 13015000.0 1245.5 1936.9 1402.0 1317.3 2062.2 1828.0 1452.7 1575.6 2510.3 2334.0 2325.9 True False 1455.7099504485816 2035.4799368312042 1600.8246817160034 1640.038559135845 1758.8531117798207 2021.4377466718065 1716.6367859466231 1798.9461250726301 1941.7210581253685 1806.7477789666011 1748.3148384256472 0.8326360438371869 1.1642525088125137 0.9156386747581127 0.9380682032148714 1.0060276748343926 1.1562206658911078 0.9818808078597846 1.0289600508639372 1.110624365502659 1.0334224358546156 1.0 10.771749294978326 -7.006622733655442 24.489419931646296 1.0533102464991115 0.9734858220289702 0.1827893857189581 0.08719849652868684 337.69610829727986 1248736.35021787 0.012206349422903894 0.022477188347822336 9.848662756479361e-08 7.006622733655442 -0.07982442447014138 S(ph)STPLPTISSSAENTR ddPTM_A549_PD325901_60min_R1 2 SSTPLPTISSSAENTR 16 0 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 S(0.828)S(0.172)TPLPTISSSAENTR;S(0.811)S(0.188)T(0.001)PLPTISSSAENTR 244.01 1.2774e-65 45036000.0 8437.7 9045.0 9042.2 8990.3 10919.099999999999 8717.7 10435.1 9233.6 10773.6 10158.9 11631.2 True False 9294.289092493558 9807.253893430265 9655.85806716575 9545.610412547281 10152.180084850042 8646.705941544225 10832.213440805817 9049.428604380932 10320.823058203207 9517.465320271285 10200.63613625165 0.9111479880615425 0.9614355185728701 0.9465937161360127 0.9357857965959104 0.9952497029837775 0.8476634031494397 1.0619154821442585 0.8871435549220811 1.011782296745634 0.9330266459017716 1.0 13.316371504491164 -8.811466169711784 24.998248841218143 1.005563912234523 0.9463148309365388 0.03748023205663742 0.057127490496672664 108.20132118139415 54067.41881868978 0.008027207341270241 0.008545618620405227 1.5435966603715885e-09 8.811466169711784 -0.05924908129798423 S(ph)STPPGESYFGVSSLQLK ddPTM_A549_MK2206_60min_R1 4 SSTPPGESYFGVSSLQLK 18 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.333)S(0.333)T(0.333)PPGESYFGVSSLQLK;S(0.316)S(0.316)T(0.316)PPGES(0.047)Y(0.006)FGVSSLQLK;S(0.328)S(0.328)T(0.328)PPGES(0.008)Y(0.008)FGVSSLQLK;S(0.36)S(0.36)T(0.281)PPGESYFGVSSLQLK 134.29 3.1244000000000003e-13 27444900.0 2805.69 3475.96 3264.75 2873.08 4350.09 3459.11 3519.72 3085.27 4005.54 4418.9 4436.620000000001 True False 3279.221879465339 3652.8715169744405 3727.7406416778317 3576.984728977463 3710.197523529378 3825.1507242286166 4159.207564006365 3522.6164707431044 3098.2915855329984 3420.6674209406624 3334.8848095171725 0.9833088897424639 1.095351631501571 1.117801919586403 1.0725961864617872 1.1125414325979504 1.1470113490314005 1.2471817773545644 1.0562932970548724 0.929055053623148 1.025722810928486 1.0 11.703421214705111 -8.56967592592335 5.960136022077788 0.9672007173052635 1.1132990895320847 0.42456854188814874 0.06324858199057767 0.11111300036881074 9.314101876652575 0.010818442596638422 0.012325817123951489 2.6935439986465917e-09 8.56967592592335 0.1460983722268212 S(ph)STPPGESYFGVSSLQLK ddPTM_A549_PD325901_60min_R1 2 SSTPPGESYFGVSSLQLK 18 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.36)S(0.36)T(0.279)PPGESYFGVSSLQLK;S(0.333)S(0.333)T(0.333)PPGES(0.001)YFGVSSLQLK 120.66 9.261200000000001e-11 22818000.0 671.07 850.46 822.58 710.67 899.41 1153.2 691.05 969.46 1014.1 937.75 844.03 True False 739.196532384377 922.1312488896295 878.4052253753732 754.5664718513257 836.238544396056 1143.8087215422413 717.3482859070696 950.1233597733426 971.4809036277447 878.5403049625837 740.2196607469979 0.9986178043939168 1.245753521271043 1.1866818350770694 1.01938182929355 1.1297167432058748 1.545228777614416 0.9691019084566769 1.2835694728974356 1.3124224539609877 1.1868643208909078 1.0 9.53180964490151 -5.243272615116356 22.568731703438885 1.1702435425770672 0.9986172521290572 0.09713682184522787 0.15775765991713972 2047.166291037852 2543053.8988751085 0.022759590002465715 0.8592745139414351 5.711200209528695e-06 5.243272615116356 -0.17162629044801003 S(ph)STPTPR ddPTM_A549_MK2206_60min_R1 1 SSTPTPR 7 0 A0A669KBK8;Q04724;A0A669KAE5;F6T2C8 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 S(0.325)S(0.325)T(0.325)PT(0.025)PR 53.166000000000004 0.045556 121650000.0 623.89 490.48 836.77 586.25 676.8 449.64 677.91 529.4 821.66 1192.9 1039.4 True False 729.187379353967 515.4433369905358 955.436568416191 729.8812763177627 577.2436165515389 497.2206063531238 801.0774719908279 604.4440712195038 635.5553219213998 923.4230614949687 781.2882940193554 0.9333140979274706 0.6597351335431201 1.2228988655403064 0.9342022425075281 0.738835614164774 0.6364111815821034 1.0253289062730822 0.7736504896418294 0.8134709386873967 1.1819235851396133 1.0 9.609711188341286 S(ph)STSSEPTPTVK ddPTM_A549_MK2206_60min_R1 1 SSTSSEPTPTVK 12 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.606)S(0.384)T(0.009)SSEPTPTVK 161.48 4.8310000000000004e-14 4893200.0 2419.4 2428.0 1878.9 2093.6 2529.2 1694.4 1630.1 1709.7 2602.1 2437.2 2558.1 True False 2827.7355713490974 2551.574829173504 2145.3562728075585 2606.5320939852745 2157.1580304109807 1873.7002833483095 1926.2680696438297 1952.0552107366564 2012.7285046998445 1886.6348272910877 1922.8531700316628 1.4705936029959763 1.3269733066157559 1.1157150770759225 1.3555544097744883 1.1218527051524478 0.974437524690175 1.0017759544334375 1.015186828178104 1.0467406123717193 0.9811642702079126 1.0 10.909032886677016 -4.979129349774488 0.44117046605025984 1.0103544070492938 1.8946051091201093 0.7794430272856108 0.0782933803948617 2.0006514551698737 0.2159504922006673 0.01673156569932407 0.9738770183161363 1.0492298806759853e-05 4.979129349774488 0.8842507020708155 S(ph)STVTEAPIAVVTSR ddPTM_A549_MK2206_60min_R1 2 SSTVTEAPIAVVTSR 15 0 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.952)S(0.033)T(0.015)VTEAPIAVVTSR;S(0.928)S(0.054)T(0.018)VTEAPIAVVTSR 92.38 2.7206e-05 15201900.0 2400.9 2894.5 2174.1 2180.13 3150.3999999999996 2332.3 2012.33 2521.9 3614.3 3372.8 3153.5 True False 2806.11322363067 3041.8176865909027 2482.4200716966925 2714.261947869756 2686.9803333096443 2579.1024379445585 2377.9443129785695 2879.387047994838 2795.6668208511005 2610.8821374886675 2370.398917827628 1.183814758995231 1.2832513817457367 1.0472583551344714 1.1450654687090662 1.1335561761782065 1.0880457371741457 1.0031831752428644 1.214726781361205 1.1794077358984 1.101452636453881 1.0 11.210914157431889 -10.841040757204372 1.0385566211001334 0.9983274108859604 1.1420875922548546 0.12265782968111805 0.07908421041268694 0.515597137371564 0.9687987612182047 0.05510102662481613 0.012900918046978889 1.4419800197749994e-11 10.841040757204372 0.14376018136889412 S(ph)STVTEAPIAVVTSR ddPTM_A549_PD325901_60min_R1 4 SSTVTEAPIAVVTSR 15 0 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.77)S(0.137)T(0.093)VTEAPIAVVTSR;S(0.999)S(0.001)TVTEAPIAVVTSR;S(0.367)S(0.367)T(0.264)VT(0.002)EAPIAVVTSR;S(0.983)S(0.014)T(0.003)VTEAPIAVVTSR 271.43 5.920799999999999e-91 78130000.0 39036.8 42294.700000000004 42796.1 43930.700000000004 48804.299999999996 44883.6 45474.0 49786.5 48158.2 57237.7 53083.5 True False 42999.78719862669 45859.02280226256 45700.50069985539 46644.199565141396 45376.45433369478 44518.082842710166 47204.537954327636 48793.469200746316 46134.27832865169 53623.70185375297 46554.56602403147 0.9236427459431197 0.9850596132415912 0.9816545315074957 1.0019253437152364 0.9746939604220874 0.9562559947337911 1.0139615076630861 1.0480920212113916 0.9909721487863763 1.1518462405185437 1.0 15.506635052321155 -7.767303129525708 24.996621535647918 1.0016307110342055 0.973319546020139 0.16639781891593775 0.051148717443012255 157.2938450545579 670527.7030813888 0.0037923959677385512 0.005316427147678108 1.7088221724334334e-08 7.767303129525708 -0.028311165014066497 S(ph)SVGAGEPR ddPTM_A549_MK2206_60min_R1 1 SSVGAGEPR 9 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 S(0.554)S(0.446)VGAGEPR 54.066 0.020543000000000002 2862900.0 691.6 697.44 555.42 727.69 882.59 528.67 393.35 539.81 1193.6 1171.9 953.52 True False 808.3251720034038 732.9367169929031 634.1869077879476 905.9740826672456 752.762180159903 584.6135084972558 464.8166033951294 616.3297205987917 923.2515057875314 907.1669760801021 716.7346681867764 1.127788577673153 1.022605365032942 0.8848280067048223 1.2640299442459153 1.0502661773906798 0.8156623844863456 0.6485197717183693 0.8599133653713262 1.2881356892128708 1.2656942887597287 1.0 9.485295328595276 -8.750398861807701 24.999221003848202 1.1360640831495068 0.9568917539158237 0.24216366446258875 0.17179717445450152 302.42482197328115 684784.8322040613 0.032795093521096955 0.03701239962393767 1.7766469644065534e-09 8.750398861807701 -0.1791723292336831 S(ph)SVGAGEPR ddPTM_A549_PD325901_60min_R1 1 SSVGAGEPR 9 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 S(0.658)S(0.342)VGAGEPR 68.557 0.004408 4153600.0 1016.4 865.18 851.96 847.93 942.26 818.31 773.47 876.62 954.21 857.18 1035.0 True False 1119.584179765867 938.0917549494734 909.7791288516657 900.3047103112478 876.0789082205309 811.645954669816 802.9048241090247 859.1351264049136 914.1078720546602 803.0575085127459 907.7015614055699 1.2334276235376287 1.0334803803761716 1.0022888221574486 0.9918510098375637 0.9651618389461933 0.8941771053175094 0.8845471444003378 0.9464951509773196 1.007057727915737 0.8847153543166948 1.0 9.826074228862963 -5.018068645855654 1.556832010126251 0.9801210161236884 1.4737210009997408 0.7008289220599717 0.05093500872081668 0.9116715166244771 1.267361456773715 0.007235165994593805 0.8189301420028168 9.592489978310484e-06 5.018068645855654 0.4935999848760524 S(ph)T(ph)SPDHTR ddPTM_A549_PD325901_60min_R1 1 STSPDHTR 8 0 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 2 S(0.992)T(0.733)S(0.269)PDHT(0.006)R 73.196 0.0080854 12885000.0 2821.0 2720.8 2263.6 2343.9 2614.9 2933.7 2116.3 2587.2 2550.0 3156.0 2839.9 True False 3107.385843289561 2950.091364648431 2417.221508132578 2488.6773796168727 2431.2384449152732 2909.8089198651364 2196.836954583797 2535.596266380865 2442.8323678638694 2956.7296213936697 2490.6103036093486 1.2476403228503439 1.1844853289064172 0.9705338103795617 0.9992239155239683 0.976161722848398 1.168311604448232 0.8820476456714964 1.0180622246307756 0.9808167758415517 1.1871506421975486 1.0 11.282283590852789 -5.677085259558028 4.3865223739513235 0.9956377931675295 1.2321509968727253 0.416364815465607 0.08632105334362529 0.08450117399641091 2.9133023449693156 0.00792769368386191 0.033436655810604315 2.1033654720173156e-06 5.677085259558028 0.2365132037051958 S(ph)TAALEEDAQILK ddPTM_A549_MK2206_60min_R1 2 STAALEEDAQILK 13 0 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 S(0.983)T(0.017)AALEEDAQILK;S(0.979)T(0.021)AALEEDAQILK 206.63 2.4275e-31 43736000.0 2432.51 2619.5 2813.2 2626.3 3687.8 3285.2 2855.2 3224.2 4006.6000000000004 2836.8 3154.2 True False 2843.058218840369 2752.8213612108725 3212.154061771369 3269.7436178990856 3145.329505199119 3632.83768346073 3373.95288169257 3681.2402236983835 3099.1114972254722 2195.964909756834 2370.9250885086103 1.1991345625469534 1.161074795046556 1.3548104397477692 1.3791003493728524 1.326625425849129 1.532244819150277 1.4230533465799617 1.552659863249414 1.3071317656750239 0.9262059440006044 1.0 11.211234364966415 -10.18345174726708 0.8839201113605648 1.021539171924408 1.3626652806121753 0.6122910349344863 0.11879699893535764 0.3127623850184245 0.4816942288198412 0.05791769723822554 0.024345467103545123 6.55463107687387e-11 10.18345174726708 0.34112610868776727 S(ph)TAALEEDAQILK ddPTM_A549_PD325901_60min_R1 2 STAALEEDAQILK 13 0 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 S(0.993)T(0.007)AALEEDAQILK;S(0.986)T(0.014)AALEEDAQILK 306.27 8.902499999999998e-135 58370000.0 13494.9 13737.400000000001 14551.5 13822.4 15678.599999999999 14189.5 14496.0 15257.3 14337.0 13649.7 15546.3 True False 14864.892313579692 14895.098909409495 15539.052295277957 14676.17825505195 14577.389224233659 14073.945416513725 15047.653212515565 14952.981182379695 13734.465748260513 12787.855612527619 13634.203656115376 1.090264799360857 1.0924803006539048 1.1397110302300784 1.0764235759724194 1.0691778993410614 1.032252837898685 1.1036693885503324 1.096725673132571 1.0073537182422947 0.9379246441571126 1.0 13.734942817615288 -8.767289856897644 23.991187966962155 1.0034725748791986 1.087194388516875 0.6778482175100858 0.031537090699153565 34.04002485725944 139588.3554375197 0.004419340486091646 0.0047693504529679655 1.7088743971533963e-09 8.767289856897644 0.0837218136376765 S(ph)TAGDTHLGGEDFDNR ddPTM_A549_MK2206_60min_R1 1 STAGDTHLGGEDFDNR 16 0 P11142;E9PKE3;P11142-2;E9PN89;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 1 S(0.414)T(0.414)AGDT(0.173)HLGGEDFDNR 75.97 0.00014756 1441000.0 253.8 270.78 188.85 0.0 218.9 206.78 173.35 182.06 88.98299999999999 279.67 435.44 True False 296.63523518574846 284.5615454051076 215.6317697161677 0.0 186.7000999750765 228.66132235054488 204.84545112125494 207.8675625353663 68.82849257665207 216.4923527607494 327.3082304673732 0.9062871250202725 0.8693992967997586 0.6588033836126291 0.0 0.5704106484229922 0.6986115870781268 0.6258487628885775 0.635081990570619 0.2102864705796423 0.6614326576866506 1.0 8.354506070511114 -11.11089259363295 1.4721263541547323 0.9987678528586945 0.5270776688221402 0.05106496933776561 0.27125467937784964 0.4359156997364748 1.6969916646830607 0.19876266567791093 0.04363424717055468 7.746533554170333e-12 11.11089259363295 -0.47169018403655427 S(ph)TAGDTHLGGEDFDNR ddPTM_A549_PD325901_60min_R1 1 STAGDTHLGGEDFDNR 16 0 P11142;E9PKE3;P11142-2;E9PN89;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 1 S(0.439)T(0.439)AGDT(0.122)HLGGEDFDNR 60.062 0.0013241 2059200.0 275.21 334.08 388.62 229.48 369.63 212.66 203.62 108.37 213.9 197.51 330.15 True False 303.1491166011059 362.23409405386195 414.9940901619025 243.65445841310634 343.66846395427456 210.92816746719825 211.36887052513944 106.20847533537963 204.91052685728695 185.03918489273252 289.5436429932838 1.0469893708152926 1.2510517941582446 1.4332695612713853 0.8415120287022088 1.1869314774154658 0.7284848849956995 0.7300069458960365 0.3668133557946676 0.7077016947736615 0.6390718268921713 1.0 8.177637012201625 -6.862932518076129 1.4729420719522697 0.8013592351266297 1.2147973996829442 0.488985614245685 0.21255664595433849 0.32665638825352294 1.4205994922231593 0.035558738797165285 0.08665259405354139 1.3710947942608158e-07 6.862932518076129 0.41343816455631455 S(ph)TAYEDYYYHPPPR ddPTM_A549_MK2206_60min_R1 1 STAYEDYYYHPPPR 14 0 O43390-4;O43390;O43390-2;B4DT28;O43390-3;A0A286YEZ8 O43390-4 HNRNPR Heterogeneous nuclear ribonucleoprotein R 1 S(0.499)T(0.499)AY(0.001)EDYYYHPPPR 103.39 7.8456e-06 2084600.0 352.77 219.99 222.98 343.71 403.79 341.25 377.52 323.96 298.69 507.25 511.72 True False 412.3089516015624 231.18655134673782 254.60191692513146 427.9189654297283 344.3930258973784 377.36084849658283 446.11049730196817 369.88232208589073 231.0371919099178 392.6618726995751 384.64580124647324 1.0719185033749092 0.6010375015080385 0.6619126378087973 1.1125013299066964 0.8953510600696725 0.9810606206377842 1.1597955725925357 0.961617989556261 0.6006491976806315 1.0208401376724383 1.0 8.587386749896536 -4.946008903668759 19.107636798900618 0.8541925238707575 3.4139502573549065 0.015904663437647515 0.19160112882621985 27370856.875266235 177198944.58421853 0.02915468736773513 2768744453.224083 1.1323771476184932e-05 4.946008903668759 2.5597577334841493 S(ph)TCGDSEVEEESPGKR ddPTM_A549_MK2206_60min_R1 1 STCGDSEVEEESPGKR 16 1 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 S(0.664)T(0.334)CGDS(0.002)EVEEESPGKR 43.261 0.028428 2765000.0 359.63 844.31 638.48 597.68 846.71 816.32 737.43 826.85 1032.5 1080.6 900.37 True False 420.326751890665 887.2817726604125 729.0260647518073 744.1116268308749 722.1600806299546 902.7024405706393 871.4114855514686 944.058519621924 798.640398563695 836.491709490706 676.783280052152 0.6210655083829423 1.3110279151577735 1.0771927827407757 1.0994828754834705 1.067047756520087 1.333813152861989 1.2875783300738735 1.3949199802175611 1.1800533820843695 1.2359816416065228 1.0 9.402550116855805 -5.249602902545817 24.294194658879086 1.1439716259319228 0.621065036335894 0.5894609118119305 0.13156302358023866 773.5388131890018 1587633.9774334074 0.020255419087058826 0.44594314609380437 5.628557375033519e-06 5.249602902545817 -0.5229065895960288 S(ph)TDISTFR ddPTM_A549_MK2206_60min_R1 2 STDISTFR 8 0 K7EQ41;K7EL54;K7ESN3;Q8N2G8-2;Q8N2G8-3;Q8N2G8 K7EQ41 GHDC GH3 domain-containing protein 1 S(0.96)T(0.037)DIS(0.003)T(0.001)FR;S(0.942)T(0.033)DIS(0.013)T(0.013)FR 53.751000000000005 0.024386 3010900.0 1370.0500000000002 1276.32 1137.95 1059.97 1676.79 1350.78 1002.52 1189.61 1781.24 1785.7 1829.9 True False 1601.2809454934395 1341.2792363965102 1299.3284212259107 1319.6626975838617 1430.1364122302812 1493.7186430248032 1184.6649071709282 1358.2408605278317 1377.791984055783 1382.3091297774893 1375.485327329245 1.1641570532799632 0.9751316206337497 0.944632701934228 0.9594160485493706 1.0397322194684193 1.0859575259338679 0.8612704793232296 0.98746299472718 1.0016769766137867 1.0049610143508356 1.0 10.425725034783504 -5.25801223654398 24.438922299364254 0.9917104413774072 1.1641571429217692 0.470508914277302 0.05401931935002397 159.53643475273458 1137579.0642883577 0.0070196171064696765 0.07021848693316966 5.520618843405549e-06 5.25801223654398 0.17244670154436204 S(ph)TDSPVPGSEDDLVAGATLHSPEWSEER ddPTM_A549_PD325901_60min_R1 1 STDSPVPGSEDDLVAGATLHSPEWSEER 28 0 Q9H694;Q9H694-2 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.355)T(0.355)DS(0.28)PVPGS(0.01)EDDLVAGATLHSPEWSEER 112.13 6.1226e-16 22909000.0 1083.1 1334.5 997.51 1377.4 1164.3 1576.1 909.8 1566.1 1353.2 1147.9 1626.8 True False 1193.0555146639224 1446.962998428158 1065.2070271149178 1462.4788696976334 1082.5235846169462 1563.264764154289 944.4229368616625 1534.8629069183164 1296.3297098797593 1075.4213980981608 1426.7139131348613 0.8362261723813076 1.0141928140651577 0.7466157141303691 1.0250680646158326 0.7587530861308842 1.0957100437321663 0.6619567722491189 1.075802859135104 0.9086122297857081 0.7537750828651979 1.0 10.478480357051046 -12.122537281349807 0.22724196039660094 1.1233480002323037 0.8836914336775736 0.0 0.15373677138785638 24.88744906674296 0.963712640919382 1.7187657401231322 0.09311629702218446 7.541586534652339e-13 12.122537281349807 -0.2396565665547301 S(ph)TDSSSVSGSLQQETK ddPTM_A549_MK2206_60min_R1 2 STDSSSVSGSLQQETK 16 0 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 S(0.989)T(0.011)DSSSVSGSLQQETK;S(0.445)T(0.445)DS(0.076)S(0.013)S(0.02)VSGSLQQETK 345.71 8.027799999999997e-211 38367000.0 4784.6 5395.6 4730.0 4829.0 7310.0 5868.8 6317.2 5613.9 9589.2 9115.9 7425.4 True False 5592.123507760971 5670.212993529064 5400.785124476959 6012.1052167820435 6234.708683498448 6489.832520605851 7464.953468838723 6409.6875168477 7417.261510805799 7056.611858732491 5581.468249385529 1.0019090421909351 1.0158998923183529 0.9676280296087931 1.0771547822463963 1.1170373824458888 1.1627464729052834 1.3374533608895025 1.1483873472814883 1.3289086633472071 1.2642931113169662 1.0 12.446428968987782 -6.694845631671468 1.8849228525809987 1.1731001596808983 0.9975310801359112 0.476152244978548 0.0919897313202664 0.358116767588531 2.575824864024906 0.018913617247180103 0.04643569942485032 2.019083911877518e-07 6.694845631671468 -0.17556907954498713 S(ph)TDSSSVSGSLQQETK ddPTM_A549_PD325901_60min_R1 2 STDSSSVSGSLQQETK 16 0 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 S(0.99)T(0.009)DSSSVSGSLQQETK;S(0.803)T(0.098)DS(0.098)S(0.001)SVSGSLQQETK 379.99 7.452599999999997e-265 50781000.0 10206.8 11794.9 10861.9 11226.3 13190.6 11473.4 10064.2 11251.599999999999 12886.2 13099.1 12414.7 True False 11242.986822150968 12788.897617205148 11599.053851910776 11919.723054222832 12264.13776109963 11379.964434393643 10447.19863834155 11027.178011290558 12344.63782696761 12272.020590493603 10887.770603267367 1.0326252482557818 1.1746112297192652 1.065328640229613 1.0947808774227648 1.1264140482000256 1.0452061169417521 0.9595351536159659 1.012804036115654 1.1338076707147966 1.1271380558670872 1.0 13.410420955378447 -7.276886414715459 23.760490456757523 1.0506981891906884 1.100888937713567 0.16494997193483185 0.05811091103731925 705.123170494672 1084611.3938031134 0.009722869511641528 0.01557980999516773 5.285834793068518e-08 7.276886414715459 0.05019074852287875 S(ph)TEDLSPQK ddPTM_A549_MK2206_60min_R1 2 STEDLSPQK 9 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 S(0.976)T(0.024)EDLSPQK;S(0.977)T(0.023)EDLSPQK 133.89 4.6646e-05 9269300.0 5100.5 6061.799999999999 4760.0 5846.700000000001 8585.400000000001 6173.299999999999 5676.3 6448.1 9959.400000000001 8149.0 7539.8 True False 5961.339704747483 6370.319727958789 5435.039575583579 7279.141762468335 7322.499033010607 6826.554508495104 6707.610234782689 7362.137921478054 7703.611801893721 6308.135240273702 5667.4595721061505 1.051853944241215 1.1240167921641548 0.9589904447370942 1.2843747131950425 1.2920249257798249 1.204517548231616 1.1835303189097115 1.2990190450960948 1.35927071095646 1.113044594322437 1.0 12.468486479436265 -6.26382871195153 24.991130153832618 1.200649361776836 1.0528600350821322 0.35657052211143125 0.10104695263769557 278.7405348330176 2915494.982351099 0.01982418938196904 0.048255401789310454 5.447174499341582e-07 6.26382871195153 -0.14778932669470368 S(ph)TEEVKPIDENLGQTGK ddPTM_A549_MK2206_60min_R1 2 STEEVKPIDENLGQTGK 17 1 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3;Q5T8D3;X6RDD7;Q5T8E0 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 S(0.979)T(0.021)EEVKPIDENLGQTGK;S(0.979)T(0.021)EEVKPIDENLGQTGK 163.64 3.8937e-23 13892200.0 5229.4 6349.7 5931.1 4944.4 10588.0 6882.299999999999 6507.6 7073.700000000001 10943.3 7369.3 8346.0 True False 6111.994873445054 6672.872608238468 6772.2191652822985 6155.778221962553 9030.519225838792 7610.5804178989965 7689.9466842612 8076.418637297707 8464.66002285916 5704.570011798875 6273.457862118082 0.9742625212089152 1.0636673992077368 1.0795034116951607 0.9812416624544288 1.439480335138468 1.2131396408757367 1.2257907605782299 1.2873950562522627 1.3492814025216504 0.9093182957752209 1.0 12.61504514482414 S(ph)TEFPR ddPTM_A549_MK2206_60min_R1 3 STEFPR 6 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.969)T(0.031)EFPR;S(0.889)T(0.111)EFPR;S(0.973)T(0.027)EFPR 95.352 0.035469 44656600.0 2609.4 2631.5 2727.32 2937.33 4101.6900000000005 3260.99 3072.6400000000003 3154.59 4710.400000000001 4223.2 4668.2 True False 3049.802926295085 2765.432109954728 3114.0949864034865 3656.9759818617526 3498.3368344758883 3606.06579733003 3630.8989151036208 3601.762793026702 3643.5019209631264 3269.176186860217 3508.957104234319 0.8691479649650989 0.7881065592445211 0.8874702351435572 1.0421831539202393 0.99697338284768 1.0276745170177566 1.0347515820931958 1.026448225508483 1.0383432492139757 0.931666044852827 1.0 11.776826596070823 -6.120979570837203 3.7119436027297468 1.0206768608302907 0.8295265595504209 0.8141231817685373 0.03528600433617491 0.042589634053888284 1.0437393085444029 0.003198294836328998 0.009312623899287688 7.568684971912196e-07 6.120979570837203 -0.19115030127986987 S(ph)TEFPR ddPTM_A549_PD325901_60min_R1 4 STEFPR 6 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.9)T(0.1)EFPR;S(0.957)T(0.043)EFPR;S(0.932)T(0.068)EFPR;S(0.984)T(0.016)EFPR 89.14200000000001 0.03812 55807100.0 7150.719999999999 7805.24 7460.9800000000005 7053.24 8731.869999999999 7321.33 7518.77 7835.47 8831.130000000001 8019.91 8554.29 True False 7876.655830318161 8463.014967292165 7967.3269693174625 7488.90261572973 8118.573574516173 7261.707515859224 7804.900906778811 7679.185404042696 8459.988317181826 7513.531513913598 7502.166560112125 1.049917482797188 1.128076123008082 1.062003476659466 0.9982319848171705 1.0821638668596603 0.9679480530955704 1.0403529226178847 1.0235956963248127 1.1276726862027155 1.0015148895602903 1.0 12.873091578157375 -5.986758551589458 24.341300833654085 1.0484358942744285 1.090507574781247 0.11564609579021612 0.04738978430536591 337.76115655550416 620881.9737959983 0.007595371516796018 0.023594308281227667 1.03095912855232e-06 5.986758551589458 0.04207168050681842 S(ph)TEFPRK ddPTM_A549_MK2206_60min_R1 2 STEFPRK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.985)T(0.015)EFPRK;S(0.908)T(0.092)EFPRK 105.52 0.0040938 9842100.0 2424.5 2810.8 2421.3999999999996 2575.4 3878.1 3167.6 2613.3 2792.5 4640.4 4159.5 4583.4 True False 2833.696326666067 2953.8577141025075 2764.7909303189213 3206.373115614098 3307.636627288004 3502.793329517291 3088.1027828968904 3188.345426672584 3589.356809196095 3219.866061101787 3445.215284595256 0.8225019607153431 0.8573797194358862 0.8025016441443452 0.9306742397059761 0.9600667459237124 1.0167124664689275 0.8963453740336232 0.9254415655615991 1.0418381763384557 0.9345906699935175 1.0 11.750378421528861 -6.335644646693614 0.44872188413047415 1.016932298102273 0.7631940056060684 0.5092876379818378 0.05170631412426237 0.9564210152983295 0.23008884963683937 0.011959064766034462 0.10934617666591535 4.6169519347372694e-07 6.335644646693614 -0.2537382924962046 S(ph)TEFPRK ddPTM_A549_PD325901_60min_R1 2 STEFPRK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.991)T(0.009)EFPRK;S(0.99)T(0.01)EFPRK 103.56 0.0043258 15349800.0 5383.3 4943.200000000001 5879.6 5248.1 6543.4 5809.1 5395.9 5639.4 6888.8 6292.299999999999 5798.5 True False 5929.808653023998 5359.780812161908 6278.625012907005 5572.263217700123 6083.814157504534 5761.7926156009635 5601.243927249777 5526.917742976285 6599.287692447305 5895.003104149364 5085.321259719996 1.1660637254116173 1.0539709368247512 1.2346565127829727 1.0957544141482496 1.1963480470139491 1.1330243108216558 1.1014533086859861 1.086837480014115 1.297713036287243 1.1592194087800758 1.0 12.31212320233673 -11.158311630194998 1.5582049030154292 1.000288088910159 1.1689138636455607 0.0 0.08296811184009646 0.33241234742780573 1.4518739990903862 0.056878253383189234 0.012182875355613404 6.945257782718168e-12 11.158311630194998 0.16862577473540163 S(ph)TELLIR ddPTM_A549_MK2206_60min_R1 3 STELLIR 7 0 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 1 S(0.752)T(0.248)ELLIR;S(0.964)T(0.036)ELLIR;S(0.959)T(0.041)ELLIR 124.98 0.006061199999999999 10670100.0 2225.09 2186.75 1860.99 1698.42 2364.2299999999996 2141.15 1673.63 2149.38 3121.8999999999996 3148.91 2982.3199999999997 True False 2600.630793772488 2298.046234635569 2124.9063654969077 2114.532976244971 2016.4548988765428 2367.7250718196606 1977.706907182382 2454.061197200184 2414.7946346498775 2437.5690439870264 2241.7276361552845 1.1601011433452935 1.0251228550569482 0.9478878393725237 0.9432604309913131 0.8995093187747376 1.0562055058037605 0.8822244394391658 1.0947187149858517 1.0772025092180308 1.0873618207105762 1.0 11.130395289907312 -8.309858129543004 24.999845597501086 1.0418450202122518 0.9851889404133656 0.16371774629520797 0.07757283960988666 683.4853511830956 352899.43546262674 0.012703491557589975 0.015357782030379753 4.899388409629563e-09 8.309858129543004 -0.056656079798886205 S(ph)TELLIR ddPTM_A549_PD325901_60min_R1 1 STELLIR 7 0 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 1 S(0.5)T(0.5)ELLIR 106.42 0.0095319 3772900.0 451.9 312.35 312.92 247.84 388.23 274.96 511.66 515.94 356.14 367.45 644.65 True False 497.7765553288026 338.6728306924202 334.15663294082265 263.148513914521 360.9620641207911 272.7208169226975 531.1315012910952 505.6491719528999 341.1726743102111 344.24914429059083 565.3621367730441 0.880456123521104 0.5990369864976918 0.5910488361461755 0.46545125115118546 0.6384616879034009 0.4823825282664394 0.9394536116667993 0.8943810330826681 0.6034586544078554 0.6089002462306462 1.0 9.143031456532624 -7.762247907568698 24.999999818719086 0.824048652513053 0.602932319561866 0.2956652873286414 0.15256718559502794 22.24421150658002 687812.8841030842 0.026841822529590924 0.038283969218734136 1.728829212903995e-08 7.762247907568698 -0.22111633295118704 S(ph)TELVLSPDMPR ddPTM_A549_MK2206_60min_R1 4 STELVLSPDMPR 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 S(0.964)T(0.033)ELVLS(0.002)PDMPR;S(0.866)T(0.134)ELVLSPDMPR;S(0.98)T(0.02)ELVLSPDMPR;S(0.98)T(0.02)ELVLSPDMPR 222.79 4.717399999999999e-40 21415500.0 7636.2300000000005 7848.52 6326.66 6894.969999999999 10913.0 8331.4 7800.8 7641.900000000001 11079.199999999999 9215.4 9965.6 True False 8925.038936101138 8247.976144260638 7223.875521273447 8584.23795952696 9307.712156363685 9213.023218064269 9218.104384809269 8725.162727337221 8569.778889846864 7133.634739626741 7490.866483432061 1.1914561494109008 1.1010710393120897 0.9643577998954952 1.145960614638262 1.2425414572466398 1.2299008717404312 1.2305791866932123 1.1647734940457313 1.1440303880467086 0.9523110250869605 1.0 12.870916892404663 -10.359300078895872 0.8166909007784368 1.0034694943422564 1.1561401671436822 0.44458818442642334 0.0760636719987059 0.5519014036368093 0.6897756148121279 0.04787849030073342 0.01591738855765015 4.372199005301315e-11 10.359300078895872 0.15267067280142577 S(ph)TELVLSPDMPR ddPTM_A549_PD325901_60min_R1 2 STELVLSPDMPR 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 S(0.99)T(0.01)ELVLSPDMPR;S(0.989)T(0.011)ELVLSPDMPR 199.8 1.3559999999999998e-24 10957200.0 3226.8 2561.2 2712.7 3129.2 4146.799999999999 3518.8 2785.9 3611.2 3660.1000000000004 3905.5 4511.0 True False 3554.382360555391 2777.041312532183 2896.8001347902627 3322.4835770711707 3855.5430736833746 3490.144059454421 2891.9189490029744 3539.171783068405 3506.278725340607 3658.9060634832 3956.1755975850488 0.8984389779677822 0.7019509736189061 0.7322223352670554 0.8398220693488175 0.9745631806729957 0.8822015032863796 0.7309885210272962 0.8945942099306226 0.8862798525628968 0.9248593681525891 1.0 11.949890747195628 -14.999999999999206 0.09299307321073973 1.577470840150115 0.6981169330095334 0.2760924725227081 0.08077521430383848 85.3841558451848 0.5769918399560005 9.59550614088681 0.7007137483716218 1.0000000000018283e-15 14.999999999999206 -0.8793539071405816 S(ph)TENVNKLPELSSFGK ddPTM_A549_MK2206_60min_R1 1 STENVNKLPELSSFGK 16 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.99)T(0.01)ENVNKLPELSSFGK 213.13 7.9278e-47 14068000.0 5842.8 4995.9 5428.3 4477.6 6924.1 6029.5 5142.4 4943.1 7417.2 7315.8 6825.6 True False 6828.9217972549 5250.169970785793 6198.1145647353615 5574.612201007104 5905.574062299807 6667.537687941825 6076.707515696228 5643.799562608859 5737.216042834515 5663.155698956236 5130.615143023385 1.3310142364782271 1.0233022404584329 1.2080646066707152 1.0865387571678353 1.1510460047525124 1.2995591175861922 1.1844013527226536 1.1000239552723619 1.1182316121753912 1.1037966288812366 1.0 12.324916095013954 -9.805605940537182 0.553114736973369 1.000243933577135 1.174885507327126 0.2037290830625853 0.08831061050013021 0.65162170345394 0.41450323664681865 0.05020202533783787 0.020827536825194667 1.5645666168252125e-10 9.805605940537182 0.17464157374999112 S(ph)TENVNKLPELSSFGK ddPTM_A549_PD325901_60min_R1 2 STENVNKLPELSSFGK 16 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.989)T(0.011)ENVNKLPELSSFGK;S(0.966)T(0.034)ENVNKLPELSSFGK 181.26 1.6880000000000002e-34 65519000.0 10361.099999999999 10272.9 10981.7 9977.2 11636.9 10766.1 10256.0 11010.3 11579.6 11260.3 11874.099999999999 True False 11412.951244561318 11138.63333574569 11726.9842003267 10593.468984134759 10819.564289125605 10678.424451089082 10646.297692298547 10790.69092908675 11092.949681143713 10549.322736305177 10413.660976121622 1.0959595545438876 1.0696174343764808 1.1261154196604355 1.0172665509685244 1.038977964995664 1.0254246297795326 1.0223395707532978 1.036205322396192 1.0652305377119238 1.0130272879532591 1.0 13.346189724227813 S(ph)TENVNKLPELSSFGKPSSSVQGTGLIR ddPTM_A549_MK2206_60min_R1 3 STENVNKLPELSSFGKPSSSVQGTGLIR 28 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.981)T(0.019)ENVNKLPELSSFGKPSSSVQGTGLIR;S(0.966)T(0.034)ENVNKLPELSSFGKPSSSVQGTGLIR;S(0.477)T(0.477)ENVNKLPELS(0.021)S(0.021)FGKPS(0.001)S(0.001)SVQGTGLIR 173.7 9.2344e-58 163527000.0 5860.2 5538.490000000001 6590.64 5389.58 8700.1 6513.7 6291.799999999999 6389.89 10470.3 8750.400000000001 8858.4 True False 6849.25849186574 5820.375484196526 7525.291854710954 6710.027341947441 7420.326814952778 7202.975410555878 7434.938617621642 7295.676475717404 8098.793767633373 6773.678562583266 6658.614800597508 1.0286311337984477 0.8741120576120782 1.1301587612540185 1.0077212067208512 1.114394966095188 1.0817528309205575 1.1165893868728478 1.0956748053758463 1.2162880734453405 1.0172804352604137 1.0 12.701006367640147 -5.772688258683252 24.99993716992883 1.099136578736079 0.951371583989101 0.35280028120782836 0.0689939458188452 163.11641098121154 362519.18395143823 0.011413323988799481 0.03594896651512003 1.687764086152972e-06 5.772688258683252 -0.1477649947469779 S(ph)TENVNKLPELSSFGKPSSSVQGTGLIR ddPTM_A549_PD325901_60min_R1 2 STENVNKLPELSSFGKPSSSVQGTGLIR 28 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.995)T(0.005)ENVNKLPELSSFGKPSSSVQGTGLIR;S(0.5)T(0.5)ENVNKLPELSSFGKPSSSVQGTGLIR 169.75 1.4322e-57 158133000.0 7042.6 6982.7 6649.7 6947.4 8192.7 7824.0 6991.299999999999 7975.299999999999 8782.1 8022.1 7644.8 True False 7757.5595675119 7571.15663478778 7100.9886298945 7376.525119309807 7617.273015280649 7760.28393803893 7257.3577472861525 7816.2263849981855 8413.018877575409 7515.583236939847 6704.538064379998 1.1570610074878112 1.129258505520607 1.0591316749502508 1.100228688162717 1.1361368884979335 1.1574673547261844 1.0824545520657398 1.1658113221139554 1.2548245377667793 1.1209695828067239 1.0 12.710922220045244 -5.303911479178546 4.957682281753567 1.121446282213041 1.1578566827697383 0.028603387046601148 0.06171902614723085 0.8581888403260478 49.36041798996326 0.012296776352056355 0.08932518376568196 4.9669355055257866e-06 5.303911479178546 0.0364104005566972 S(ph)TEPELIQVK ddPTM_A549_MK2206_60min_R1 2 STEPELIQVK 10 0 Q15758;M0QXM4;Q15758-3;Q15758-2 Q15758 SLC1A5 Neutral amino acid transporter B(0);Amino acid transporter 1 S(0.989)T(0.011)EPELIQVK;S(0.994)T(0.006)EPELIQVK 216.03 1.4577000000000002e-26 51212000.0 8505.400000000001 9741.1 10632.3 8901.8 15225.1 11499.8 11270.1 11676.4 16740.7 12487.2 13731.400000000001 True False 9940.903582934858 10236.880382397872 12140.1200166969 11082.741399616993 12985.507958568014 12716.701203050565 13317.731287462686 13331.565457475284 12948.958179404593 9666.332847262956 10321.514412639377 0.9631245169566942 0.9918002313557917 1.176195617363138 1.0737514822481324 1.258101034346898 1.2320576898558726 1.2902884940173356 1.2916288176810469 1.2545599087230588 0.9365227292058899 1.0 13.333367043654906 -5.7282023727913804 5.755726590269244 1.161661237175723 0.972965760823679 0.29511445305681216 0.11337892102341757 0.18650864675879672 16.448764534910968 0.01689525001922398 0.06525085355950959 1.869810641897215e-06 5.7282023727913804 -0.18869547635204387 S(ph)TEPELIQVK ddPTM_A549_PD325901_60min_R1 2 STEPELIQVK 10 0 Q15758;M0QXM4;Q15758-3;Q15758-2 Q15758 SLC1A5 Neutral amino acid transporter B(0);Amino acid transporter 1 S(0.954)T(0.046)EPELIQVK;S(0.977)T(0.023)EPELIQVK 203.51 1.1338e-19 91964000.0 8988.9 8824.8 9429.2 9841.8 9643.7 8901.7 9137.7 9743.099999999999 9799.7 10511.5 10242.2 True False 9901.446510721571 9568.496866638292 10069.122214385803 10449.70563365047 8966.359780958906 8829.20750654923 9485.440173841298 9548.766227185906 9387.852688374729 9847.80209609619 8982.4743306552 1.1023072425523244 1.065240658020377 1.1209742264469504 1.1633437791175125 0.998206001030106 0.9829371264014743 1.0559941308676593 1.0630440873733507 1.0451299210882308 1.0963351225494535 1.0 13.132897192085256 -2.0000000748463567 0.11409029199616404 0.9797652035056285 1.385731176792044 0.0750280555549303 0.0510866299720443 78.91648542746879 0.6031460311844468 0.19479899192555916 5.091472230143766 0.009999998276599097 2.0000000748463567 0.4059659732864155 S(ph)TEPSVTPDLLNFKK ddPTM_A549_MK2206_60min_R1 1 STEPSVTPDLLNFKK 15 1 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.817)T(0.108)EPS(0.074)VTPDLLNFKK 112.3 7.691199999999999e-07 4717600.0 2605.5 3463.9 2374.9 2429.7 4235.4 2359.6 2869.0 2590.6 4789.4 3831.1 3960.4 True False 3045.244701640933 3640.197714486862 2711.696531103665 3024.976609073377 3612.3782706004517 2609.291305824285 3390.2601630624763 2957.825483379763 3704.608547100204 2965.6518491854936 2976.923378520543 1.0229503129349415 1.2228053099223366 0.910905719196344 1.0161419104366454 1.2134602780390384 0.8765060346030934 1.1388469678206334 0.9935846870367652 1.2444420215280456 0.996213698539782 1.0 11.539606373940082 S(ph)TFHAGQLR ddPTM_A549_MK2206_60min_R1 1 STFHAGQLR 9 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.5)T(0.5)FHAGQLR 87.94200000000001 0.00034819999999999995 10672000.0 864.85 765.17 821.24 752.81 1025.5 673.87 597.37 625.78 979.8 1075.8 1014.0 True False 1010.8155364475762 804.1138846946834 937.7041808933317 937.2484837949253 874.6503084716356 745.1784761212961 705.9043965174736 714.4862313708751 757.8768644190874 832.7760328244506 762.1958150236927 1.3261887779010635 1.0549964573994515 1.230266766636843 1.2296688925873873 1.147540161243797 0.9776732716619971 0.9261457260763505 0.937405083165755 0.9943335419593309 1.0926011615513316 1.0 9.574017876564087 -7.165422441930951 3.685685465445133 0.9849416020577969 1.1994415660833286 0.6822876972833334 0.07190827870043881 0.0939297677071423 2.3739649383551966 0.009009242017835442 0.016040341009044015 6.832467240544127e-08 7.165422441930951 0.21449996402553173 S(ph)TFHAGQLR ddPTM_A549_PD325901_60min_R1 2 STFHAGQLR 9 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.806)T(0.194)FHAGQLR;S(0.79)T(0.21)FHAGQLR 118.6 5.0279e-05 45280000.0 1555.6 1813.63 1719.9299999999998 1624.81 1816.89 1677.5900000000001 1514.81 1666.27 1861.02 1854.1599999999999 2030.95 True False 1713.523366827807 1966.4709650350396 1836.6547925792818 1725.1708234887549 1689.2779143302266 1663.928263243193 1572.4569234858375 1633.034937686472 1782.8078012713804 1737.0880211670742 1781.1560252527934 0.9620287849766628 1.104041946440905 1.0311588465803334 0.9685680530114745 0.9484165847236619 0.9341844508018534 0.8828294103334737 0.9168399143779113 1.0009273617780636 0.9752587625896139 1.0 10.798598183470615 -4.923266871059278 20.729123826582832 0.9867102705737214 0.0004706053303801993 0.0 0.05758778727269679 1980.3132474857168 814218.5883164045 0.008261459620045323 47441.51793792288 1.1932546321265306e-05 4.923266871059278 -0.9862396652433412 S(ph)TFS(ph)TNYR ddPTM_A549_MK2206_60min_R1 1 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 S(0.994)T(0.006)FS(0.866)T(0.134)NYR 106.4 0.0021988000000000003 23768000.0 3198.2 3892.0 3442.7 3108.3 5251.1 3572.5 3586.0 3419.9 5328.7 4849.9 5149.5 True False 3737.9779715171862 4090.0861759239233 3930.92662749193 3869.833639536888 4478.670146090108 3950.5395787664233 4237.529782064152 3904.6812980045006 4121.757958185337 3754.304221598165 3870.73703103008 0.965701865446136 1.0566685732291843 1.0155499058653004 0.999766609954138 1.1570587488084265 1.020616886938224 1.0947604417695256 1.0087694582975553 1.064850937984918 0.96991973143654 1.0 11.918392582239157 -5.25262521888656 23.471081116874004 1.0394282937760695 0.9657017755124042 0.14924126658960857 0.05014995709416061 644.7060946015696 1716685.7235797339 0.00615199847448531 0.09598737230089185 5.589523432033824e-06 5.25262521888656 -0.07372651826366527 S(ph)TFS(ph)TNYR ddPTM_A549_PD325901_60min_R1 1 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 S(0.972)T(0.343)FS(0.408)T(0.277)NYR 97.81299999999999 0.0028222 47564000.0 6422.5 6731.9 7793.5 7508.8 8706.4 7166.9 8168.7 7626.0 7783.6 7936.8 7335.9 True False 7074.507472005389 7299.220838605101 8322.413776122656 7972.601522277906 8094.8924994494355 7108.535142578118 8479.564348584157 7473.893447518732 7456.482360198126 7435.669093497235 6433.6308061015625 1.099613528537576 1.1345414523448603 1.2935796328614007 1.2392071852672686 1.2582152665291824 1.1049025591951105 1.3180060535245917 1.1616913796841744 1.1589851181896396 1.1557500449738822 1.0 12.651417433974355 -10.097732144383588 0.6002224338447988 0.9965261735203573 1.2074675399030133 0.16661050930071408 0.08221738321358049 0.4756869568109076 0.32642849271282426 0.04831628934446019 0.016048591511786153 7.984870105572702e-11 10.097732144383588 0.21094136638265593 S(ph)TFST(ph)NYR ddPTM_A549_MK2206_60min_R1 1 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 S(0.984)T(0.017)FS(0.335)T(0.663)NYR 88.948 0.0040784 21548000.0 3118.4 3026.1 3276.2 2684.7 4624.0 3687.0 3054.7 3279.2 5029.1 4505.8 3874.2 True False 3644.709682439869 3180.1155644818527 3740.814423850194 3342.451620520761 3943.815725375759 4077.155892767477 3609.699449322744 3744.036642128818 3890.0168798224486 3487.9366505859925 2912.1292175195144 1.2515617990139702 1.0920241949945486 1.2845633364567988 1.1477689933579889 1.354272228598088 1.4000600894490203 1.2395395876002384 1.2856698183598816 1.3357981700880281 1.1977272950672628 1.0 11.507858657141888 -10.829347807269977 1.027530786266957 0.9969403550710615 1.2682354017516253 0.21309991120181027 0.10065062939173275 0.32086361300794974 0.5902565710128836 0.06412197522208776 0.015100814002934167 1.4813312771813195e-11 10.829347807269977 0.2712950466805638 S(ph)TFST(ph)NYR ddPTM_A549_PD325901_60min_R1 1 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 S(0.991)T(0.012)FS(0.307)T(0.69)NYR 103.31 0.0032804 38851000.0 6361.1 7517.6 7042.4 7711.7 8496.3 6472.6 7080.9 8099.2 6985.4 8572.5 8665.8 True False 7006.874189205683 8151.134535019496 7520.339613391441 8188.034194458569 7899.549198643789 6419.889291583688 7350.367524317158 7937.65510230051 6691.82793038285 8031.2308870080005 7599.961537032253 0.9219617961305937 1.0725231299265856 0.9895233780785813 1.0773783728458126 1.039419628658874 0.8447265502991773 0.9671585163294708 1.0444335887257825 0.8805081312287767 1.0567462542901442 1.0 12.891776401840252 S(ph)TFSTNYR ddPTM_A549_MK2206_60min_R1 12 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.991)T(0.009)FSTNYR;S(0.993)T(0.007)FSTNYR;S(0.991)T(0.009)FSTNYR;S(0.943)T(0.056)FSTNYR;S(0.982)T(0.014)FS(0.004)T(0.001)NYR;S(0.992)T(0.008)FSTNYR;S(0.912)T(0.071)FS(0.016)T(0.001)NYR;S(0.987)T(0.013)FSTNYR;S(0.991)T(0.007)FS(0.001)TNYR;S(0.684)T(0.011)FS(0.27)T(0.034)NYR;S(0.988)T(0.008)FS(0.003)T(0.001)NYR;S(0.984)T(0.01)FS(0.005)T(0.001)NYR 205.73 1.4636e-15 17658066000.0 100263.9 112126.7 95038.09999999999 103302.20000000001 141975.3 111142.2 98896.49999999999 99388.6 171070.6 154739.2 152387.2 True False 117185.99510299615 117833.47009814205 108515.93165719938 128611.24363741202 121090.92144354254 122903.1938337787 116864.71391296899 113477.23841482212 132323.38224361296 119783.50724895828 114545.25256723705 1.0230541421540715 1.0287067116026902 0.9473629786053462 1.1227985512705414 1.0571448290487921 1.072966282575837 1.020249301422339 0.9906760504824238 1.1552061676754373 1.045730875477763 1.0 16.80555814050292 -6.2608885602932585 24.99999861701926 1.0665402232355106 1.0026078237698988 0.19601563139389966 0.05051216793931741 70.56626670826417 3202675.853505163 0.008929454380864123 0.022157756037453784 5.484176705169184e-07 6.2608885602932585 -0.0639323994656118 S(ph)TFSTNYR ddPTM_A549_PD325901_60min_R1 11 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.449)T(0.031)FS(0.449)T(0.071)NYR;S(0.987)T(0.013)FSTNYR;S(0.993)T(0.007)FSTNYR;S(0.992)T(0.008)FSTNYR;S(0.95)T(0.05)FSTNYR;S(0.999)T(0.001)FSTNYR;S(0.99)T(0.01)FSTNYR;S(0.999)T(0.001)FSTNYR;S(0.99)T(0.01)FSTNYR;S(0.991)T(0.007)FS(0.002)TNYR;S(0.987)T(0.009)FS(0.004)TNYR 191.79 3.8047000000000003e-10 24793536000.0 93726.9 96020.99999999999 104603.40000000001 102215.59999999999 106110.9 106356.00000000001 103099.40000000001 107291.9 124344.69999999998 119132.5 129858.2 True False 103241.985889903 104113.02665572887 111702.4157553433 108529.22546352942 98658.03644673225 105489.87199821953 107022.90408515635 105151.8788856327 119118.9246793422 111610.4536187204 113886.46463895349 0.9065342946346086 0.9141826202594954 0.9808225771997214 0.9529598254506559 0.86628412568167 0.9262722513394976 0.9397333074166784 0.9233044437632563 1.0459445295538572 0.9800150875922914 1.0 16.797236767939165 -8.753779968522895 24.993187224009453 1.0216960287136825 0.927017824522395 0.5693611917041377 0.03135265649967578 75.51593615497603 246413.54192742347 0.00537556275319601 0.00603922054957641 1.762868962243567e-09 8.753779968522895 -0.09467820419128747 S(ph)TGQLELGR ddPTM_A549_MK2206_60min_R1 2 STGQLELGR 9 0 E7EUN2 E7EUN2 AGAP1 1 S(0.965)T(0.035)GQLELGR;S(0.964)T(0.036)GQLELGR 77.744 0.0018882999999999999 3382900.0 1146.42 1220.41 1155.47 1068.6100000000001 1718.44 1355.08 1851.38 1640.71 1947.98 2090.7 2496.9 True False 1339.9076687220092 1282.5236562074294 1319.3330206721762 1330.4194979717254 1465.6597524037038 1498.4736661706954 2187.751781349115 1873.285666963643 1506.765640284849 1618.4094179457895 1876.850819065738 0.7139127175749593 0.6833380912212544 0.7029503928974579 0.7088573500124979 0.7809143579846598 0.798397853973609 1.1656503325278338 0.998100460587555 0.8028158791197317 0.8623005097184038 1.0 10.8740982671978 S(ph)TGSPTQETQAPFIAK ddPTM_A549_MK2206_60min_R1 2 STGSPTQETQAPFIAK 16 0 O15231-3;O15231-2;H0Y704 O15231-3 ZNF185 Zinc finger protein 185 1 S(0.351)T(0.351)GS(0.291)PT(0.006)QETQAPFIAK;S(0.38)T(0.38)GS(0.237)PT(0.003)QETQAPFIAK 84.41 0.00011637 10875900.0 2704.6 3831.3 3126.0 2315.88 4060.5 3254.1000000000004 2838.0 2757.3999999999996 5296.5 4202.9 4035.8 True False 3161.070358878549 4026.296805194582 3569.313805309717 2883.2707039638026 3463.205828911824 3598.4467021032383 3353.6278643329792 3148.269894183341 4096.851206772504 3253.4619709591775 3033.5994775864065 1.0420196806578965 1.3272341437762858 1.1765936247291076 0.9504454115537333 1.1416160420976935 1.1861970338174754 1.1054946076801127 1.037800117465793 1.3504917959809388 1.0724757816571415 1.0 11.566814905565629 S(ph)TGVVNIPAAECLDEYEDDEAGQKER ddPTM_A549_MK2206_60min_R1 1 STGVVNIPAAECLDEYEDDEAGQKER 26 1 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 S(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER 60.943000000000005 0.00014806 6942900.0 770.6 1174.5 1210.7 974.82 1456.4 1047.2 1202.3 879.9 1549.3 1373.2 1778.7 True False 900.6584406388411 1234.2770333048936 1382.3954651594622 1213.650943761333 1242.1654892814136 1158.0140089248996 1420.7423471767233 1004.6285195807361 1198.3860237237122 1062.9931662711806 1336.9997003773583 0.6736414678212993 0.9231692669463786 1.0339534592036868 0.9077421209733922 0.9290693849301698 0.8661288469982893 1.0626347536022105 0.7514051942548582 0.8963248259408559 0.7950586421007863 1.0 10.384783426784342 -10.562913340323087 0.9643083585210399 0.9974837688805767 0.9012112167756332 0.0 0.12067984186886249 0.9364362980968116 1.6159481159714044 0.05804232163474121 0.018019792008501918 2.7358145797884546e-11 10.562913340323087 -0.09627255210494345 S(ph)TGVVNIPAAECLDEYEDDEAGQKER ddPTM_A549_PD325901_60min_R1 1 STGVVNIPAAECLDEYEDDEAGQKER 26 1 Q96IZ0;H0YI16 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 S(0.5)T(0.5)GVVNIPAAECLDEYEDDEAGQKER 94.542 2.6092e-09 10466000.0 2820.8 3012.4 3046.9 3214.2 2888.5 2718.2 3186.4 2949.4 2479.3 3532.5 3085.5 True False 3107.1655394367954 3266.265520018719 3253.6809564981218 3412.7338340221636 2685.6217247840336 2696.063880416338 3307.6601956649843 2890.5719032404613 2375.1036429979963 3309.457347139779 2706.003060596024 1.1482490854065817 1.2070442815017701 1.202393672009176 1.2611714612290479 0.9924681031929427 0.9963269885668582 1.2223416314009783 1.0682071817774603 0.8777165397864909 1.2230057664498124 1.0 11.401947755722365 -7.702233902879079 0.652475266698809 0.945533799071843 1.1971411132969771 0.0 0.12312970427458578 0.4524769953566818 0.3892871096887203 0.02245782904524348 0.04581421122929828 1.9850255318108346e-08 7.702233902879079 0.25160731422513416 S(ph)TKADIGPNLDQLKDDEILR ddPTM_A549_PD325901_60min_R1 2 STKADIGPNLDQLKDDEILR 20 2 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 S(0.846)T(0.154)KADIGPNLDQLKDDEILR;S(0.5)T(0.5)KADIGPNLDQLKDDEILR 88.22200000000001 9.7905e-07 5725300.0 1266.98 1630.92 1585.72 1580.01 1858.38 2136.8999999999996 1915.47 1968.1100000000001 2166.0 1793.95 1964.0900000000001 True False 1395.602876898621 1768.3633521142385 1693.3364949089894 1677.6036292369376 1727.8537998629583 2119.4977948869378 1988.3642590354018 1928.8545020975725 2074.9705524678975 1680.6796908425777 1722.5193813923343 0.8102102606070751 1.0266144876029482 0.9830580214082956 0.973924385037055 1.0030968699268348 1.2304638297734107 1.1543349122888718 1.1197868209404152 1.20461376219214 0.9757101771964174 1.0 10.750304500556123 -7.047402306247687 8.474513547531277 1.1141735304763711 0.9603487081719627 0.4466406054536657 0.08696487622607367 0.2906489863817486 49.29349967532389 0.013877745855799975 0.024202013861663176 8.965978513198045e-08 7.047402306247687 -0.15382482230440842 S(ph)TKDLIK ddPTM_A549_PD325901_60min_R1 1 STKDLIK 7 1 Q53EZ4;Q53EZ4-2 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 S(0.927)T(0.073)KDLIK 49.368 0.015277 4117000.0 1552.1 1547.1 1840.4 1861.6 2026.3 2176.6 1913.8 2151.2 2006.3 2132.0 2175.4 True False 1709.6680494043703 1677.4795465479215 1965.3006112242426 1976.5868039996453 1883.9796783555096 2158.874491249429 1986.6307062715427 2108.2926284162477 1921.9821880961883 1997.3851561506044 1907.8395909967883 0.8961277758740297 0.8792560729235571 1.0301183707994197 1.036034063517331 0.9874937532726152 1.1315807164487464 1.0412986058401212 1.1050680771933916 1.0074128858454032 1.046935583880525 1.0 10.89772416093109 -5.761987003969924 24.999710484609164 1.0238281367178108 0.8876918832471237 0.6265994706662779 0.04424932353533202 7.327788116169715 334610.96997656004 0.006446478363682405 0.022002501686021917 1.7298681238189174e-06 5.761987003969924 -0.13613625347068714 S(ph)TMVGTPYWMAPEVVTR ddPTM_A549_MK2206_60min_R1 1 STMVGTPYWMAPEVVTR 17 0 Q13177;H7C1X3;H0YCG5;A0A087X294;O75914-2;O75914;O75914-4;O75914-3;E9PM17;B3KNX7;Q13153;Q13153-2 Q13177;E9PM17 PAK2;PAK1;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 3;Serine/threonine-protein kinase PAK 1 1 S(0.485)T(0.485)MVGT(0.025)PY(0.005)WMAPEVVTR 43.798 0.021105000000000002 973810.0 695.12 652.99 709.95 546.41 798.03 648.16 730.48 685.11 1087.6 1029.7 1003.8 True False 812.4392619476657 686.2244018542035 810.6315854381431 680.2804745292774 680.6408441439488 716.7478609862134 863.1987605137257 782.2264405613793 841.2603365403147 797.0900548422911 754.5287565293708 1.0767505610848653 0.9094741531265834 1.074354792210744 0.9015964847494806 0.9020740936034215 0.9499278255252466 1.1440236744378143 1.0367085863757008 1.1149480112724741 1.056407788231546 1.0 9.559432075432891 -7.729721232845075 24.99822053647834 1.0601811509100338 0.9650014732226105 0.35433717800371656 0.0673879697921286 190.86909086781225 150430.3979487921 0.010789553063879222 0.016002748508404663 1.8632827663295067e-08 7.729721232845075 -0.0951796776874233 S(ph)TNTAVSR ddPTM_A549_MK2206_60min_R1 2 STNTAVSR 8 0 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 S(0.974)T(0.024)NT(0.002)AVSR;S(0.975)T(0.021)NT(0.003)AVSR 93.44200000000001 0.00256 29317000.0 1642.51 1913.21 1816.1799999999998 1013.4 4624.700000000001 2291.4 1721.2 2093.22 4456.200000000001 2376.8 2291.7 True False 1919.7255324859887 2010.5842170193746 2073.7416336939887 1261.6830454932551 3944.412756303045 2533.8744270917805 2033.91976042633 2389.940345217396 3446.877815089142 1839.8792292407086 1722.607642297628 1.1144299406018212 1.1671747922455755 1.2038386355513988 0.7324262440925968 2.2897917433141974 1.4709527375090932 1.1807214309774403 1.3873968084976531 2.000965124299384 1.0680779441955004 1.0 10.750378421528861 S(ph)TNTAVSR ddPTM_A549_PD325901_60min_R1 2 STNTAVSR 8 0 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 S(0.981)T(0.019)NTAVSR;S(0.973)T(0.027)NTAVSR 96.95700000000001 0.0024719 17933000.0 3019.8999999999996 2911.4 3386.9 2441.3 3059.8 2029.52 2471.8 2611.0 2772.8 3254.8999999999996 2771.1 True False 3326.478024867119 3156.753895559189 3616.7554010842136 2592.0935564054253 2844.8902037369535 2012.9922620052118 2565.86570162086 2558.921556710126 2656.2688586717386 3049.3850585152904 2430.272267450218 1.3687676353881033 1.298930139572871 1.488209962943298 1.0665856624883376 1.17060554977313 0.8282990712465291 1.0557935158075533 1.0529361631546261 1.0929922931880511 1.2547503830567226 1.0 11.246902235076043 -6.319145892013444 7.1798846620511245 1.0406849404028395 1.3762105267114988 0.6238286548140481 0.10944202352095411 0.09091018887221816 9.863981250647525 0.012102415653858369 0.02837804919372198 4.795723194322807e-07 6.319145892013444 0.33552558630865925 S(ph)TPAPKEEEKVNEEQWSLR ddPTM_A549_MK2206_60min_R1 2 STPAPKEEEKVNEEQWSLR 19 2 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 S(0.956)T(0.044)PAPKEEEKVNEEQWSLR;S(0.929)T(0.071)PAPKEEEKVNEEQWSLR 102.78 4.3164999999999995e-10 21623100.0 6782.9 5790.0 4099.8 3235.3999999999996 7206.9 5230.1 4672.4 4952.1 7552.1 7056.1 7509.7 True False 7927.687694016603 6084.68626891046 4681.213288230578 4028.073145242623 6146.7745569227045 5783.545710540599 5521.314599474769 5654.075340170201 5841.561408225553 5462.122109325718 5644.834232823884 1.40441461467872 1.0779211608250425 0.8292915425239608 0.7135857279599049 1.0889202948033638 1.0245731711500274 0.9781181114884001 1.001637091004831 1.0348508330426658 0.9676319771383681 1.0 12.462715499850908 -5.304380554463284 3.6761141141200975 0.988305562338306 1.4326859323067171 0.5993749815123925 0.10289912330467844 0.13052636755586416 3.155337047125201 0.014560685616764709 0.14559642256567257 4.961573685358769e-06 5.304380554463284 0.4443803699684111 S(ph)TPGAPR ddPTM_A549_MK2206_60min_R1 1 STPGAPR 7 0 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 S(0.788)T(0.212)PGAPR 96.367 0.010198 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)TPHLDGAGGGAAGEDGDLGLGSAR ddPTM_A549_MK2206_60min_R1 1 STPHLDGAGGGAAGEDGDLGLGSAR 25 0 Q9P244 Q9P244 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 1 S(0.812)T(0.188)PHLDGAGGGAAGEDGDLGLGSAR 158.98 6.516999999999999e-41 6875200.0 1618.9 1619.6 1536.1 1370.9 2192.1 1690.3 1600.8 2079.8 2298.8 2183.0 2673.3 True False 1892.1307416950701 1702.030722129081 1753.942078162591 1706.7705615420405 1869.6449938573105 1869.1664240696682 1891.6446389091727 2374.61801912037 1778.1254704292712 1689.8587838406556 2009.4458306734082 0.9416181878667397 0.8470149810202617 0.8728486488112037 0.8493737604113794 0.9304281634856275 0.9301900034017193 0.94137627898894 1.181727809166463 0.8848835053360873 0.8409576202779987 1.0 10.9725819713535 -7.150280829972703 1.9070156035077477 0.9640874507627577 0.8761390793782639 0.18269120864472677 0.08407747565372756 0.44201070475129145 3.1433544684350827 0.012520682862109766 0.024334358956251034 7.074881499035696e-08 7.150280829972703 -0.08794837138449385 S(ph)TPKEDDSSASTSQSTR ddPTM_A549_PD325901_60min_R1 1 STPKEDDSSASTSQSTR 17 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.688)T(0.311)PKEDDSSASTSQSTR 151.0 2.4089000000000002e-17 50189000.0 6416.6 6502.0 7190.3 6652.5 8444.6 7581.7 7667.2 8183.3 8106.1 8072.3 8469.4 True False 7068.008508348741 7049.946358770981 7678.276996786391 7063.409816076308 7851.48042828847 7519.957148904624 7958.97949165283 8020.077661825341 7765.42880672208 7562.613600372662 7427.71749195008 0.9515720698867209 0.9491403471404889 1.033733041827164 0.9509529439873559 1.0570515689103213 1.0124183044191584 1.0715242603503046 1.079749959596234 1.045466365022364 1.0181611792005791 1.0 12.858703229080088 -6.760129082519948 24.999877132391145 1.0316215267338773 0.9742191839997044 0.5020201664084549 0.03236421923366823 29.183366151340206 556790.6550863629 0.005109308799070938 0.010188817905471395 1.737284390281358e-07 6.760129082519948 -0.057402342734172884 S(ph)TPLEENVVDREQIDFLAAR ddPTM_A549_MK2206_60min_R1 2 STPLEENVVDREQIDFLAAR 20 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.53)T(0.47)PLEENVVDREQIDFLAAR;S(0.5)T(0.5)PLEENVVDREQIDFLAAR 61.703 0.00062938 3995500.0 672.78 1020.88 601.9200000000001 576.7 1533.62 1141.83 1153.67 1053.06 1484.05 1311.69 1177.49 True False 786.3288161082272 1072.8384314689658 687.2813070032073 717.9915258890469 1308.026529574129 1262.6576927145877 1363.2769056536395 1202.3344798609953 1147.915044540873 1015.3783179917313 885.086735929238 0.8884200657268618 1.2121280185524534 0.7765129439903333 0.8112103557119059 1.4778512392922185 1.4265920405969525 1.5402749248324883 1.358436897824126 1.2969520363851073 1.1472076992835083 1.0 9.78967503182168 -6.746088763409788 24.966162503400703 1.232305897831161 0.9323896439494971 0.47058797530353735 0.1891006314418064 249.0655441914269 405076.53095057607 0.032963880843460885 0.06842176236512745 1.7943668471377482e-07 6.746088763409788 -0.2999162538816639 S(ph)TPLEENVVDREQIDFLAAR ddPTM_A549_PD325901_60min_R1 3 STPLEENVVDREQIDFLAAR 20 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.563)T(0.437)PLEENVVDREQIDFLAAR;S(0.554)T(0.446)PLEENVVDREQIDFLAAR;S(0.973)T(0.027)PLEENVVDREQIDFLAAR 91.416 9.755500000000001e-07 19528500.0 3373.59 3335.8299999999995 3411.83 3123.23 3609.41 3411.0799999999995 2829.33 3448.95 3295.64 3516.87 3155.5 True False 3716.0743732943033 3616.9521011964043 3643.377300800482 3316.144823730027 3355.897493388519 3383.3012954199708 2937.001701418783 3380.1579866010643 3157.135711696817 3294.814228007212 2767.393504362585 1.3428066400518015 1.3069887225992816 1.3165374909845582 1.1982917566664724 1.2126564177079269 1.2225588049138851 1.0612880664744002 1.2214229675947792 1.1408336785931719 1.1905839277331498 1.0 11.4343120845292 -2.0000000000002025 0.06950285986734582 0.7588955314209549 2.2597888517351334 0.4926212075910422 0.0710245781553405 54.370307845619706 0.2714052711266764 1.015274137854973 7.9827686633697645 0.009999999999995337 2.0000000000002025 1.5008933203141785 S(ph)TPLSQPSANGVQTEGLDYDRLK ddPTM_A549_PD325901_60min_R1 1 STPLSQPSANGVQTEGLDYDRLK 23 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 S(0.828)T(0.171)PLS(0.001)QPSANGVQTEGLDYDRLK 73.655 3.4726e-05 2828700.0 2088.2 2063.1 2150.8 2214.5 2708.6 2673.2 2545.5 2437.9 2819.3 2236.0 2495.4 True False 2300.1925267484085 2236.964677450079 2296.7662218110745 2351.284635505596 2518.3572801627265 2651.4303454966357 2642.370395451046 2389.274172004448 2700.814625379846 2094.8185784018533 2188.481619643921 1.0510449373217325 1.0221537422891613 1.049479329044935 1.0743908536404174 1.1507326621150595 1.2115387772496071 1.2073989435108783 1.0917497092770634 1.234104321981596 0.9572018149929414 1.0 11.095714551956425 -6.546708254191498 3.5395256766960292 1.128915776423454 1.0406070791157298 0.15923905612571054 0.08127702569150998 0.3445577038777983 9.146981940411251 0.013190398796406365 0.03015620009421303 2.839826096512507e-07 6.546708254191498 -0.08830869730772428 S(ph)TPPPNNLVNPVQELETER ddPTM_A549_MK2206_60min_R1 2 STPPPNNLVNPVQELETER 19 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.582)T(0.418)PPPNNLVNPVQELETER 132.86 1.2851e-16 31340000.0 2051.1000000000004 2236.48 2162.7 1631.9899999999998 3707.6000000000004 3293.3 2250.6000000000004 2934.3 3845.8 3088.6 3635.5 True False 2397.2755354195792 2350.3072792215644 2469.4033802761755 2031.8276232628148 3162.2169514280213 3641.7948200843844 2659.504887761734 3350.246010916869 2974.7324404806373 2390.8831148741397 2732.705015304372 0.8772536816062336 0.8600662223177368 0.9036479848525218 0.7435224848213291 1.157174643336251 1.3326703027544877 0.9732133080106765 1.2259815794804017 1.088566978075132 0.874914453438671 1.0 11.416114019705734 -6.7661891766400375 24.999663808744344 1.0806382784214839 0.8512275183030743 0.4815270018911513 0.12285775170228805 77.16471193178555 406144.7985013036 0.01621972261137821 0.03137521384702818 1.7132108783238473e-07 6.7661891766400375 -0.22941076011840955 S(ph)TPPPNNLVNPVQELETER ddPTM_A549_PD325901_60min_R1 2 STPPPNNLVNPVQELETER 19 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.586)T(0.414)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER 198.96 1.5147000000000001e-54 33933000.0 4910.200000000001 5209.299999999999 6062.8 5567.299999999999 6343.299999999999 5274.2 4985.5 5103.700000000001 6061.3 6402.5 5670.6 True False 5408.6798893018085 5648.305993039939 6474.258066578099 5911.1794767443225 5897.768491197005 5231.248663855437 5175.225930670281 5001.902699724804 5806.564639738539 5998.24505734251 4973.152148895098 1.0875757924485525 1.1357597402876245 1.3018419450562166 1.1886182645865015 1.185921587479951 1.051897972801351 1.0406329377676646 1.0057811524700875 1.1675823433289896 1.2061253864262247 1.0 12.279944854370756 -7.256027862228378 23.772096188320806 1.0699548419578404 1.1847428963470248 0.30031139955996833 0.07618202238932745 211.03987062619075 927068.3775915721 0.011668186699374241 0.01981986585499073 5.5459013200251064e-08 7.256027862228378 0.11478805438918438 S(ph)TPPPNNLVNPVQELETERR ddPTM_A549_MK2206_60min_R1 1 STPPPNNLVNPVQELETERR 20 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.5)T(0.5)PPPNNLVNPVQELETERR 93.572 1.1056e-06 17824000.0 786.02 674.08 842.21 1145.8 1146.6 792.7 1061.2 747.09 1689.9 1400.0 1299.5 True False 918.6809596560375 708.3877927715307 961.6480422168581 1426.521051436917 977.9366588918356 876.5829878483263 1254.0063036047068 852.9922953671686 1307.1403482157757 1083.7390276577723 976.7982856245441 0.9405022236179013 0.7252140008810546 0.9844898955796189 1.460404949958353 1.001165412843209 0.897404306241035 1.2837924902815752 0.8732532682751214 1.3381886183184872 1.1094808862864176 1.0 9.931916858032945 -6.001134644389852 24.454610274947463 1.1402752855403404 0.8383564383618489 0.2747035297382532 0.1798355126600906 30.20309550109223 651049.9020067387 0.02568419194879049 0.07834354762869804 9.973907946510804e-07 6.001134644389852 -0.3019188471784915 S(ph)TPPPNNLVNPVQELETERR ddPTM_A549_PD325901_60min_R1 1 STPPPNNLVNPVQELETERR 20 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.5)T(0.5)PPPNNLVNPVQELETERR 91.12799999999999 1.5112e-06 23470000.0 3535.0 3319.9 3508.2 3415.0 3537.8 4224.4 3473.7 3119.0 3445.1 3767.3 3763.1 True False 3893.870597670542 3599.6796241900624 3746.287548520368 3625.9367939722792 3289.317132747429 4189.997886995357 3605.893554381575 3056.7890981918335 3300.314427657967 3529.4320350685616 3300.262556256327 1.1798669140092835 1.090725226502397 1.1351483358251326 1.0986813116121836 0.996683468868818 1.2695953172126724 1.09260808584634 0.9262260338642029 1.0000157173560453 1.0694397718077904 1.0 11.688365088994109 -8.07626201135466 7.270188896949712 0.9948750846959101 1.124631612718393 0.4333407650148291 0.0692312179762286 0.17054902503420918 14.280150328708254 0.0098631326169354 0.012775798003010215 8.389536901627867e-09 8.07626201135466 0.12975652802248294 S(ph)TPPYLFPEYPEASK ddPTM_A549_MK2206_60min_R1 2 STPPYLFPEYPEASK 15 0 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 S(0.498)T(0.498)PPY(0.003)LFPEYPEASK;S(0.499)T(0.499)PPY(0.003)LFPEYPEASK 88.97399999999999 3.5688e-05 5441400.0 1398.44 1697.63 1547.95 1399.9 2582.6 1910.3899999999999 1748.97 1769.31 3012.8 2346.2 2737.4 True False 1634.4624834245808 1784.0321158360027 1767.4725863497063 1742.8755628438994 2202.702961149534 2112.546201785749 2066.7352099656273 2020.115110784625 2330.4056104529773 1816.1917904933318 2057.628031603407 0.7943430291192746 0.8670333454029566 0.8589854722052959 0.8470314051299949 1.0705059064699256 1.0266900379168857 1.0044260567130412 0.9817688521722022 1.13256894572777 0.8826628343890046 1.0 11.006766486785333 -6.757759940602024 24.97074026304948 1.0509480532329147 0.8448712831887012 0.5750643896735719 0.0665696845816483 34.90815333861774 236902.5568223331 0.008139342836085731 0.01644004723406977 1.7467874354289557e-07 6.757759940602024 -0.20607677004421354 S(ph)TPPYLFPEYPEASK ddPTM_A549_PD325901_60min_R1 2 STPPYLFPEYPEASK 15 0 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 S(0.497)T(0.497)PPY(0.006)LFPEYPEASK;S(0.5)T(0.5)PPY(0.001)LFPEYPEASK 82.90799999999999 0.00025684 3934600.0 2162.9 2475.6000000000004 2533.0 2336.4 2184.3 2607.6 2364.4 2637.4 2605.4 2424.7 2629.4 True False 2382.476015757176 2684.227500118956 2704.9046121663805 2480.71412165061 2030.882303425918 2586.364570147025 2454.378535849326 2584.7949879997263 2495.9040985225583 2271.6040281981086 2306.0004691399095 1.0331637168511896 1.1640186270734443 1.1729852826852434 1.0757647948683486 0.8806946618633582 1.1215802445659022 1.0643443350056032 1.1208995932961807 1.082351947418935 0.9850839401803635 1.0 11.17117709115817 -14.999999999574317 0.2355048876479801 0.5250325801142489 1.0899864152678131 0.16148386840744589 0.07499665033708541 68.84440778910975 0.8690351787936887 15.156272881790127 0.04488153202837279 1.0000000009801704e-15 14.999999999574317 0.5649538351535642 S(ph)TPQKLDVIK ddPTM_A549_MK2206_60min_R1 1 STPQKLDVIK 10 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.5)T(0.5)PQKLDVIK 56.951 0.0039492 3799700.0 1226.3 1553.0 1096.3 1041.0 2193.1 1490.0 1339.8 1741.2 1754.9 1875.9 1799.8 True False 1433.2694598435123 1632.0410666006812 1251.7718249395537 1296.0450467322655 1870.497895182003 1647.6708110180473 1583.224317347894 1988.0204322013612 1357.4179519994461 1452.1328871308688 1352.8599880469828 1.0594366545739964 1.206363615614599 0.9252781780815602 0.9580038275825301 1.3826248922346305 1.2179167286902022 1.1702795051492874 1.4694945890677937 1.0033691320555966 1.073380024511774 1.0 10.40179682242261 -8.925337945755718 24.999999994893905 1.0014645167765799 1.1719228475560297 0.15022962481422786 0.1539394248886456 45.45022027333156 15217.45980438169 0.02672849136390177 0.028454576477441505 1.1875777555194276e-09 8.925337945755718 0.17045833077944983 S(ph)TPQKLDVIK ddPTM_A549_PD325901_60min_R1 1 STPQKLDVIK 10 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.5)T(0.5)PQKLDVIK 51.013000000000005 0.0072563 6551600.0 1686.1 1444.1 1749.6 1972.4 2141.6 1875.2 2059.7 1897.3 1916.9 2063.7 1666.8 True False 1857.2716307587832 1565.7993750693906 1868.338377199486 2094.23066835459 1991.1814041189145 1859.9289929205777 2138.0830106110875 1859.456863096944 1836.3393591993145 1933.3976298067548 1461.794166715752 1.2705425107363508 1.0711490103885895 1.278113170609462 1.432644017905577 1.3621489601320202 1.2723603878508591 1.462643003573321 1.272037408163032 1.2562229354937584 1.3226196094013465 1.0 10.51352446629146 -10.236824007850926 0.7090032083305027 1.001965146886389 1.3028083532535717 0.0 0.13422473975329358 0.41550945110453835 0.3927315599600584 0.0655992569456881 0.021774727612922762 5.796635498974116e-11 10.236824007850926 0.30084320636718265 S(ph)TPQPPSGK ddPTM_A549_MK2206_60min_R1 1 STPQPPSGK 9 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 S(0.5)T(0.5)PQPPSGK 71.221 0.0032015 4912900.0 1774.0 1764.6 1387.7 1493.1 2133.9 1425.4 1587.4 1503.7 2446.2 2731.5 2442.7 True False 2073.407829864138 1854.410602784005 1584.4967266885153 1858.909567027805 1820.0061367602361 1576.2348818960575 1875.8100323615818 1716.8540798881158 1892.1396057787024 2114.4522528908597 1836.1101749096385 1.129239333345657 1.009966955210227 0.8629638615049307 1.0124172244289689 0.9912292637067953 0.8584642160558963 1.0216217185626657 0.935049597430943 1.030515288044641 1.151593342156017 1.0 10.842436914234531 S(ph)TPSSS(ph)PSLR ddPTM_A549_MK2206_60min_R1 1 STPSSSPSLR 10 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6;S4R3I2;M0R0J9 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 2 S(0.762)T(0.238)PS(0.115)S(0.243)S(0.637)PS(0.006)LR 82.48899999999999 0.0012017999999999998 23675000.0 995.33 1099.1 1022.0 901.96 1183.0 966.27 1161.4 1094.2 1610.0 1433.0 1868.3 True False 1163.3173705178535 1155.0394953643327 1166.9349676988268 1122.940240490523 1008.9822671106243 1068.5200500418857 1372.411346594898 1249.3062008469617 1245.337570641694 1109.2843047382776 1404.3495475431607 0.8283673908344393 0.8224729358762685 0.8309433856694162 0.7996159093404136 0.7184694642981075 0.7608647376368711 0.9772576556854119 0.8895977522352326 0.8867717961104126 0.789891880322043 1.0 10.455686356872954 -7.760813287658663 24.999998646212028 0.9420921925046543 0.7933501353429946 0.41190622719802394 0.06307295012224035 8.234370078763934 328790.74639131327 0.008593392983594895 0.012328277699497344 1.7345495568502987e-08 7.760813287658663 -0.14874205716165967 S(ph)TPSSS(ph)PSLR ddPTM_A549_PD325901_60min_R1 2 STPSSSPSLR 10 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6;S4R3I2;M0R0J9 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 2 S(0.645)T(0.355)PS(0.305)S(0.232)S(0.462)PS(0.001)LR;S(0.828)T(0.172)PS(0.051)S(0.16)S(0.786)PS(0.003)LR 101.39 0.00049088 62707000.0 2593.02 3255.1 2580.1 2796.6 2957.6 2828.6000000000004 2250.7 2516.6000000000004 3058.0 3144.8 3904.9 True False 2856.261481519566 3529.4187007744426 2755.201101401689 2969.339630460576 2749.868379166091 2805.5648194193423 2336.3516201302978 2466.4044387654935 2929.4828944814562 2946.236791305075 3424.622055200587 0.8340369931280691 1.0306009375296503 0.8045270564142037 0.8670561546934427 0.8029698853893019 0.8192334144314838 0.6822217408143898 0.7201975572808227 0.8554178672162615 0.8603100557712514 1.0 11.741729064217175 -10.111956185898274 0.9778722086368643 0.9851821752676523 0.8252199517491895 0.11464837228826852 0.09216252083004467 0.41648787545242455 0.7967829330561604 0.03585270851377086 0.0172040890016658 7.727585414477469e-11 10.111956185898274 -0.1599622235184628 S(ph)TPSSSTPSSR ddPTM_A549_PD325901_60min_R1 1 STPSSSTPSSR 11 0 H3BUV9;Q96S82 H3BUV9 UBL7 Ubiquitin-like protein 7 1 S(0.591)T(0.394)PS(0.01)S(0.002)S(0.002)T(0.002)PSSR 60.434 0.008318700000000002 7500800.0 330.12 382.29 149.52 292.73 535.32 391.14 429.63 481.83 527.25 584.54 447.73 True False 363.6335393785007 414.50691994687185 159.66732633680107 310.8112672619343 497.7209699537436 387.95468552205386 445.97980475255673 472.219522661677 505.091516061265 547.6320446417797 392.66204839431487 0.9260725370976941 1.0556327550418627 0.4066278546391671 0.7915490395186212 1.2675555786178947 0.9880116683251908 1.1357853568387126 1.202610551726837 1.2863262903219193 1.3946650736458301 1.0 8.61714435503341 -6.747393056073938 24.56420440678599 1.1396571131033535 0.7858503462039264 0.4886830685372555 0.18724425694138888 134.9164825824147 235939.99583050326 0.026039336273346748 0.05398494674083495 1.788986008186159e-07 6.747393056073938 -0.35380676689942714 S(ph)TPVIVSATTK ddPTM_A549_MK2206_60min_R1 1 STPVIVSATTK 11 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(0.5)T(0.5)PVIVSATTK 79.97399999999999 0.00030063 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)TPVIVSATTK ddPTM_A549_PD325901_60min_R1 1 STPVIVSATTK 11 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(0.619)T(0.381)PVIVSATTK 116.13 1.9750999999999998e-05 17065000.0 4024.0 4793.4 5294.4 5718.8 6011.2 5076.9 5493.6 4607.1 4901.2 4959.0 5688.0 True False 4432.513517687767 5197.356640438763 5653.709821813536 6072.037287662858 5588.994049514206 5035.555409640832 5702.66195421327 4515.207776299971 4695.219608382116 4645.887893691766 4988.412059202787 0.8885620243641501 1.0418859907233422 1.133368646117232 1.217228491872672 1.1203954250738863 1.0094505726228198 1.1431818154823061 0.9051392953735983 0.9412252942738002 0.9313360320988078 1.0 12.28436492609569 -8.260807927199721 24.99995516326017 0.9664368296089958 1.084021077818557 0.36328028400348167 0.08382580472627306 54.710932322366816 2166080.1226817193 0.01390222784475364 0.017407628618440404 5.485195016948898e-09 8.260807927199721 0.11758424820956126 S(ph)TPVRDR ddPTM_A549_PD325901_60min_R1 1 STPVRDR 7 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.5)T(0.5)PVRDR 40.001999999999995 0.033425 41519000.0 271.57 315.19 310.43 121.86 295.15 287.87 139.9 261.32 100.19 412.89 434.76 True False 299.13958648073236 341.7521674594013 331.49764656723613 129.38701543585995 274.41968221222334 285.52568216299414 145.2239710562175 256.10776759842594 95.9793627201102 386.8200549357519 381.2872761707106 0.7845517151398492 0.8963114921946449 0.8694170177837706 0.3393425994575559 0.7197189609058963 0.748846604666551 0.3808780941098007 0.6716924051873184 0.2517245361136524 1.014510787825409 1.0 8.574734577875994 S(ph)TPVRPK ddPTM_A549_PD325901_60min_R1 2 STPVRPK 7 1 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 S(0.5)T(0.5)PVRPK;S(0.5)T(0.5)PVRPK 59.35 0.008512100000000002 13165200.0 4694.3 4559.7 4200.7 4299.5 4890.1 4604.5 4235.1 5004.6 4898.1 4858.0 5466.6 True False 5170.861880238987 4943.961921268544 4485.784762861159 4565.070350127032 4546.63624592917 4567.002478617109 4396.269048035641 4904.779326967251 4692.2498906015735 4551.265050928531 4794.2428556325485 1.0785565178793488 1.0312289281424483 0.9356607284904236 0.9521983945314176 0.948353344384197 0.9526014046725929 0.9169892265408822 1.0230560851135937 0.9787259494142755 0.9493188367755394 1.0 12.227087276198684 -5.546599705269452 5.245089238843818 0.9766355694532309 1.0688536940431073 0.5498466550306131 0.03132620258333543 0.09872143782566639 7.533903865422311 0.004543201852390531 0.020254330918287163 2.840535980246637e-06 5.546599705269452 0.09221812458987633 S(ph)TPYKPIDDR ddPTM_A549_MK2206_60min_R1 2 STPYKPIDDR 10 1 Q8NB90-3;Q8NB90-2;Q8NB90 Q8NB90-3 SPATA5 Spermatogenesis-associated protein 5 1 S(0.56)T(0.439)PY(0.001)KPIDDR;S(0.5)T(0.5)PYKPIDDR 111.94 4.1083e-05 28915000.0 5851.0 6225.9 6207.1 5537.9 7317.5 6174.4 6236.8 6427.200000000001 8467.4 8521.6 9123.7 True False 6838.50575678414 6542.771717031019 7087.360115463199 6894.685748605779 6241.105443433636 6827.770909764985 7369.945829553175 7338.275282474488 6549.5474196592995 6596.564641491767 6858.033488690004 0.9971525755979367 0.9540302956847758 1.0334391232051274 1.0053444270833936 0.9100430106861127 0.9955872803807496 1.0746441879742052 1.0700261663312787 0.9550182906602239 0.9618740783885876 1.0 12.743579233824674 -4.858654085677462 18.85296011732208 0.9903021212575224 4.165002520208681 0.0 0.04813695777394868 5268.327748475084 763959.5417544391 0.006631448896201352 63159.24289944152 1.3846688246559488e-05 4.858654085677462 3.1747003989511584 S(ph)TPYKPIDDR ddPTM_A549_PD325901_60min_R1 1 STPYKPIDDR 10 1 Q8NB90-3;Q8NB90-2;Q8NB90 Q8NB90-3 SPATA5 Spermatogenesis-associated protein 5 1 S(0.733)T(0.265)PY(0.002)KPIDDR 80.31 0.00033411 31322000.0 3148.1 3507.1 3393.9 2651.2 3536.1 3478.8 3142.2 3415.2 3691.9 3527.6 3448.9 True False 3467.6927944912704 3802.65562516852 3624.230463178634 2814.958602687934 3287.7365348827493 3450.469806192462 3261.7781404778175 3347.0811568274307 3536.7422819280855 3304.866733976016 3024.707164378424 1.1464557082846993 1.257197942978379 1.198208707891037 0.930654919537114 1.0869602762217736 1.1407616072154647 1.0783781580218235 1.106580232376067 1.1692841950387236 1.092623700203773 1.0 11.5625797599587 -10.915376259533023 1.1065318496865717 0.9982597350699386 1.1257032604368258 0.07937052564468106 0.08251155620089763 0.6155802724267214 1.3084599710711775 0.06178034819315873 0.013834089695628169 1.2151327903779455e-11 10.915376259533023 0.1274435253668872 S(ph)TQESLTAGGTDLKR ddPTM_A549_PD325901_60min_R1 1 STQESLTAGGTDLKR 15 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.778)T(0.17)QES(0.05)LT(0.002)AGGTDLKR 42.711000000000006 0.032042 5481300.0 2080.0 2472.4 2112.6 2079.4 2264.8 2602.0 2118.6 2417.3 2621.0 2993.2 3163.1 True False 2291.16006878493 2680.7578248885543 2255.9737400958124 2207.839815339958 2105.728261135843 2580.8101746903517 2199.2244823424026 2369.0850551648364 2510.848484773019 2804.208841177291 2774.058752542955 0.825923411566047 0.9663666360458759 0.8132393511953492 0.7958879073184917 0.7590784655175528 0.9303372440560409 0.7927822294053408 0.854014015742499 0.9051172699465527 1.010868583301164 1.0 11.437782627876867 -9.555625850128921 0.6891582030983774 0.9904101188088087 0.8398888164405894 0.5245775001279315 0.05859813053557893 0.36963654737744867 0.3809646335047166 0.0234332983589985 0.013726507562732236 2.7821090557134255e-10 9.555625850128921 -0.15052130236821926 S(ph)TQGVTLTDLK ddPTM_A549_PD325901_60min_R1 1 STQGVTLTDLK 11 0 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(0.5)T(0.5)QGVTLTDLK 75.911 0.0012774000000000001 6515100.0 3428.4 3405.5 3111.6 3269.2 3914.4 3620.3 3445.1 3579.3 3683.8 3319.2 4523.9 True False 3776.4486441453137 3692.4934366032903 3322.771887570828 3471.131059108104 3639.466047946899 3590.81747710664 3576.205165731056 3507.908053593469 3528.9826967595777 3109.625145541783 3967.4889793648867 0.9518485530235412 0.9306877614047923 0.8374999665664441 0.8748936864504563 0.9173222829038589 0.9050604792559389 0.9013774667884604 0.8841632760262923 0.8894751101046524 0.7837766309409055 1.0 11.954010500302832 -10.680900872162894 0.8038026878276331 1.0044368359982174 0.8973957902350503 0.0 0.0700733233817436 0.36876265869486624 0.3964223482165864 0.024852488047874616 0.005596432570932308 2.084966723028289e-11 10.680900872162894 -0.10704104576316709 S(ph)TQGVTLTDLKEAEK ddPTM_A549_MK2206_60min_R1 2 STQGVTLTDLKEAEK 15 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(0.5)T(0.5)QGVTLTDLKEAEK;S(0.5)T(0.5)QGVTLTDLKEAEK 69.737 0.00059454 8367600.0 2460.4 2757.1000000000004 3669.3999999999996 2966.3 3703.0 2806.7 2445.0 2371.7 4859.200000000001 4428.7 4876.2 True False 2875.6553689953366 2897.424613473753 4189.7760963542805 3693.043633162266 3158.2936053344383 3103.7031310633256 2889.2248514073763 2707.89573802663 3758.5989585478997 3428.2535941342667 3665.3049637263584 0.7845610112812499 0.7905002836457203 1.1430907217321187 1.0075679021828805 0.8616728039250345 0.8467789615813915 0.7882631540896464 0.7387913870265324 1.0254532694400122 0.9353256081177235 1.0 11.83971752431771 -8.81891579490355 24.999987271593717 1.0120197764200054 0.8773843651605496 0.165625125621625 0.1121094537371531 89.8395188125696 39076.124591544896 0.020235965308775975 0.021542828926703658 1.517344535961767e-09 8.81891579490355 -0.13463541125945577 S(ph)TQGVTLTDLKEAEK ddPTM_A549_PD325901_60min_R1 1 STQGVTLTDLKEAEK 15 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(0.5)T(0.5)QGVTLTDLKEAEK 78.021 0.00014739 5024600.0 1900.2 1381.9 2149.7 2000.1 2337.3 2754.5 2341.5 2457.2 2218.2 2378.4 2468.5 True False 2093.106905146695 1498.357562778472 2295.5915691962373 2123.6416344433246 2173.136111247265 2732.0682652515648 2430.607063817963 2408.1892183638897 2124.976767998287 2228.227418099717 2164.8901491107717 0.9668420848080622 0.6921171327764238 1.0603732342443108 0.9809466015241513 1.0038089517566886 1.2619893283609616 1.1227392137270034 1.1123840252832473 0.9815633226799617 1.0292565740644906 1.0 11.080078106217371 -5.782071653421068 24.999697345597045 1.0296122156761378 0.8294795465987742 0.40821239188006475 0.10199197431266381 167.84964377699237 203380.3270874879 0.014578959612470034 0.045398637992823586 1.6516892666748034e-06 5.782071653421068 -0.2001326690773636 S(ph)TQGVTLTDLQEAEK ddPTM_A549_MK2206_60min_R1 1 STQGVTLTDLQEAEK 15 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.925)T(0.075)QGVTLTDLQEAEK 274.08 1.5019e-91 22832000.0 3857.1 4026.1 4223.8 3200.9 5206.8 4191.3 3968.0 3968.1 6126.2 5394.8 5147.2 True False 4508.084182958833 4231.011293136512 4822.798352804606 3985.120643693862 4440.886617406254 4634.820584040228 4688.934237376058 4530.590326796585 4738.625481531146 4176.110933148679 3869.0081845068516 1.1651782493020078 1.0935648340262691 1.2465205868824818 1.030010910716595 1.1478100861066787 1.1979350683723062 1.2119215090194273 1.1709952811521538 1.2247649153358244 1.079375057895095 1.0 11.917748065326121 -10.894470787503408 1.1289263040741555 0.9994133716236402 1.1683135082854224 0.3579518073382989 0.06214861873862178 0.3135753223970214 0.7056778303429402 0.04159634616815552 0.009809955236832438 1.2750558627473181e-11 10.894470787503408 0.16890013666178216 S(ph)TQGVTLTDLQEAEK ddPTM_A549_PD325901_60min_R1 1 STQGVTLTDLQEAEK 15 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.694)T(0.306)QGVTLTDLQEAEK 385.05 4.771799999999997e-293 32711000.0 7147.4 10123.0 9390.5 9576.5 9463.8 8695.4 10224.0 11589.0 10082.0 10898.0 10847.0 True False 7872.998786362217 10976.100736671593 10027.795799663796 10168.018655190484 8799.09533633759 8624.58754535068 10613.079914787477 11357.848303605373 9658.288601099424 10209.898420135689 9512.887764798279 0.8276139676004224 1.1538137533050503 1.0541274161533678 1.068867719938468 0.9249657468784586 0.9066213917991667 1.115652804615269 1.1939432677461235 1.0152846159753077 1.0732701438901282 1.0 13.215667641682966 -14.99976789994101 0.003937957327243887 0.5252739209771915 1.4898704678626087 0.0 0.10651713068815763 748966.3560501315 229.9747054653531 29840.956162404753 26579.930739337167 1.0005345729691441e-15 14.99976789994101 0.9645965468854172 S(ph)TQKSPATAPK ddPTM_A549_MK2206_60min_R1 1 STQKSPATAPK 11 1 Q07960;H0YE29 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.395)T(0.395)QKS(0.21)PATAPK 66.289 0.0043434 2853100.0 322.64 416.27 389.15 641.67 743.18 579.84 811.43 663.79 549.45 979.14 1140.6 True False 377.0937442093378 437.4563649670737 444.3373216046949 798.879178805661 633.8592064845932 641.1982839333591 958.8563276799531 757.8842652716181 425.0004522913534 757.9515939577367 857.3575410414435 0.43983253911930026 0.5102379626073967 0.5182637351797857 0.9317923276621 0.7393172348080546 0.7478773478267737 1.1183855996825056 0.8839769046073895 0.49570970329962893 0.8840554350720972 1.0 9.743753162043092 -6.170458068972518 6.443295976346813 0.7976117066082992 0.4864316623690245 0.48625164172418855 0.15870866350058352 0.23609981070035937 13.999427523146515 0.028980123710486666 0.07768874172216082 6.753702576828168e-07 6.170458068972518 -0.31118004423927464 S(ph)TQKSPATAPK ddPTM_A549_PD325901_60min_R1 1 STQKSPATAPK 11 1 Q07960;H0YE29 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.395)T(0.395)QKS(0.21)PATAPK 66.289 0.0043434 2227700.0 614.44 699.19 935.13 850.09 673.07 618.88 766.55 510.14 950.32 665.55 803.96 True False 676.8174964731794 758.1131951075188 998.5935451935044 902.598128605533 625.7958851654456 613.8400464690098 795.7214797222551 499.9648575029119 910.3813552268206 623.5270594165266 705.0780167223396 0.9599185911645162 1.075218879510272 1.4162880156661464 1.2801393706775814 0.8875555191389333 0.8705987591593579 1.1285580614486963 0.7090915411418912 1.2911781868606034 0.8843376826795497 1.0 9.461639089996993 -6.723258388241564 24.99943335521997 1.0718625396804355 1.1918714373087083 0.08922373944471695 0.19616474984270404 389.55186290440435 255061.60345402724 0.0298767169089023 0.06219229307445612 1.8912180830155364e-07 6.723258388241564 0.12000889762827271 S(ph)TQS(ph)EDFSR ddPTM_A549_PD325901_60min_R1 2 STQSEDFSR 9 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 2 S(0.961)T(0.041)QS(0.986)EDFS(0.012)R;S(0.974)T(0.315)QS(0.711)EDFS(0.001)R 70.089 0.0042778 9041800.0 937.6199999999999 537.63 448.63 706.56 615.94 602.6700000000001 555.98 713.88 552.71 520.54 672.24 True False 1032.806492160637 582.9379669126494 479.07672963134746 750.2026064858136 572.6784992776447 597.7620553346018 577.1381231439298 699.6411033719739 529.4815208007996 487.6730155640877 589.5587416804641 1.7518296636849962 0.9887699489469989 0.8126021984947567 1.27248152465258 0.9713680059179441 1.01391432791032 0.9789323477739794 1.1867199210340496 0.8980979898484384 0.8271830796266988 1.0 9.203491755497213 -5.261544920519333 9.575653678949983 0.9854889772752055 1.7542267895323242 0.7357362269306886 0.1302822594197593 0.025622411717560356 62.39345634366865 0.01590409963059183 0.12749858769257624 5.4758945903786115e-06 5.261544920519333 0.7687378122571188 S(ph)TRSVENLPECGITHEQR ddPTM_A549_MK2206_60min_R1 1 STRSVENLPECGITHEQR 18 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.333)T(0.333)RS(0.333)VENLPECGITHEQR 88.22200000000001 1.9912e-06 3707800.0 1783.9 1683.7 1531.4 1564.3 1783.7 1369.5 1233.0 1340.0 2380.4 2497.8 2675.7 True False 2084.9787078323766 1769.3931383358438 1748.5755474892212 1947.5535702240957 1521.3200928531028 1514.4195809994735 1457.0201397894864 1529.9491035778915 1841.2432007176947 1933.5452452025597 2011.2498444367784 1.0366582319941682 0.8797480547879604 0.8693974805397112 0.9683300041569326 0.756405325306129 0.7529743682459128 0.7244351783641798 0.7606956976577576 0.9154721407738919 0.9613650191451084 1.0 10.97387659402334 -9.238353263031689 1.928367197489862 0.9724318011531732 0.8410664778452597 0.23353135094174393 0.09306870900503213 0.306983980370447 2.3571576641107406 0.020611438330809154 0.018780590749313923 5.776260047613379e-10 9.238353263031689 -0.1313653233079135 S(ph)TRSVENLPECGITHEQR ddPTM_A549_PD325901_60min_R1 1 STRSVENLPECGITHEQR 18 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.333)T(0.333)RS(0.333)VENLPECGITHEQR 48.286 0.0087863 16886000.0 1582.3 1618.9 1954.5 1609.0 2033.6 1919.7 2218.9 1640.8 1529.6 1917.6 1598.5 True False 1742.9339311723056 1755.3303845300447 2087.1441233632804 1708.3842756958693 1890.766951539142 1904.0665996745056 2303.341453728669 1608.072956817302 1465.316231327284 1796.5224087403371 1401.8946337263803 1.2432702781231195 1.2521129208292894 1.4888024200616536 1.2186253050664784 1.3487225830327123 1.3582094929725927 1.6430203799312293 1.1470711978851638 1.045239917519566 1.2814960308143812 1.0 10.453162205256795 -8.499136279918538 9.9981512761369 1.0252108129464972 1.3613107801246187 0.3915530408513084 0.1377487587181717 0.21107198735113505 86.88700543248558 0.018412630810668816 0.021953366764979054 3.1685730211408506e-09 8.499136279918538 0.3360999671781215 S(ph)TSATDTHHVEMAR ddPTM_A549_MK2206_60min_R1 3 STSATDTHHVEMAR 14 0 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874 H3BQP2 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial 1 S(0.818)T(0.175)S(0.007)ATDTHHVEMAR;S(0.534)T(0.233)S(0.185)AT(0.044)DT(0.005)HHVEMAR;S(0.621)T(0.185)S(0.149)AT(0.038)DT(0.008)HHVEMAR 90.45299999999999 4.4986000000000006e-05 18635300.0 1187.28 1354.6599999999999 981.711 748.2099999999999 1353.31 1104.22 770.45 1100.9 1549.8899999999999 1693.97 2449.69 True False 1387.663837790921 1423.6064077793158 1120.932381677674 931.5214835884227 1154.2398917189164 1221.0678274780862 910.4307921336657 1256.9559463648507 1198.8423896657482 1311.3010004867406 1841.364364995453 0.7536063280959321 0.7731258597387005 0.6087509908341481 0.5058865596058839 0.6268394857971343 0.6631321050253417 0.4944327203464231 0.682622065605117 0.6510620127422247 0.7121355367871359 1.0 10.846559416814127 -10.507447270125738 0.6812691833162667 1.0190695988679614 0.6322891254019962 0.21990264507356283 0.11647531982161097 0.3472331255599227 0.27008007683110363 0.07474573812097657 0.01780681175479826 3.1085133000402146e-11 10.507447270125738 -0.3867804734659652 S(ph)TSATDTHHVEMAR ddPTM_A549_PD325901_60min_R1 4 STSATDTHHVEMAR 14 0 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874 H3BQP2 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial 1 S(0.818)T(0.175)S(0.007)ATDTHHVEMAR;S(0.527)T(0.463)S(0.01)ATDTHHVEMAR;S(0.59)T(0.109)S(0.132)AT(0.16)DT(0.01)HHVEMAR;S(0.708)T(0.202)S(0.059)AT(0.029)DT(0.001)HHVEMAR 90.45299999999999 4.4986000000000006e-05 40537000.0 2607.2999999999997 2671.6499999999996 2462.7999999999997 3469.5499999999997 3038.87 3535.6800000000003 3098.9 3097.3 3076.43 3775.07 4712.01 True False 2871.9911766071878 2896.7993216564896 2629.940418019485 3683.8562235802397 2825.430254732373 3506.886594330967 3216.830335283146 3035.5219217151557 2947.1383456735057 3536.7114359425223 4132.462641892426 0.6949829739518186 0.7009862091166842 0.636409968080226 0.8914433215283101 0.6837158613582751 0.8486190676668811 0.7784293807457205 0.7345551998323847 0.7131675712678406 0.855836275466707 1.0 12.012786062050179 -10.78129125158493 0.7564978081111731 1.0225766570249417 0.7417184476969326 0.39099891270692544 0.08185227959236883 0.4015913475578437 0.353717356816634 0.0710715215016205 0.01316153287238129 1.654659924134923e-11 10.78129125158493 -0.2808582093280091 S(ph)TSDLDKDDASYLR ddPTM_A549_MK2206_60min_R1 2 STSDLDKDDASYLR 14 1 Q8TEP8;H0Y966 Q8TEP8 CEP192 Centrosomal protein of 192 kDa 1 S(0.986)T(0.012)S(0.002)DLDKDDASYLR;S(0.973)T(0.022)S(0.006)DLDKDDASYLR 106.93 5.1043e-06 15755900.0 4068.3999999999996 4480.2 3705.0 3370.3999999999996 5626.799999999999 4068.7 4339.8 4109.9 6811.1 6469.0 6414.9 True False 4755.046457169821 4708.22304351859 4230.424711667468 4196.148151303005 4799.105173776887 4499.247133415521 5128.285484718904 4692.490911040873 5268.396725091701 5007.648407084376 4821.903287766749 0.9861347632652557 0.9764241965332305 0.8773350395475844 0.8702265269294606 0.9952719678041446 0.9330853119410727 1.063539681048654 0.9731615569615015 1.0925969291955138 1.0385211208588248 1.0 12.235386999962019 -7.754885642727579 24.90207394419807 1.039772955617024 0.9379404921707705 0.4901553239161024 0.04743236766093804 101.86193556833494 387040.5878846094 0.008171798282482323 0.011963894998460237 1.7583865666966124e-08 7.754885642727579 -0.10183246344625363 S(ph)TSDLDKDDASYLR ddPTM_A549_PD325901_60min_R1 2 STSDLDKDDASYLR 14 1 Q8TEP8;H0Y966 Q8TEP8 CEP192 Centrosomal protein of 192 kDa 1 S(0.995)T(0.004)S(0.001)DLDKDDASYLR;S(0.971)T(0.027)S(0.001)DLDKDDASYLR 109.87 3.4323e-06 24066000.0 5263.4 5426.200000000001 5241.0 4941.1 5762.0 5360.0 5381.6 5404.9 6088.0 5933.0 7036.0 True False 5797.736493289709 5883.484917250557 5596.68577669325 5246.30052494771 5357.296997820874 5316.349937102339 5586.399732924515 5297.095029437973 5832.142531590289 5558.389367467887 6170.616604878828 0.9395716610728497 0.9534679099328179 0.9069897118981923 0.8502068530395644 0.8681947592701029 0.8615589458108516 0.9053227725261039 0.8584385270752033 0.9451474471739302 0.9007834586697736 1.0 12.591198943948235 -9.296175391535565 1.2204858950845208 0.9859327866136293 0.8928311619268732 0.130625510969674 0.042174794116829645 0.21928256106987287 0.6797675128318412 0.008819326834356891 0.00742084267797074 5.056204239667717e-10 9.296175391535565 -0.09310162468675609 S(ph)TSFER ddPTM_A549_PD325901_60min_R1 2 STSFER 6 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 S(0.98)T(0.019)S(0.001)FER;S(0.957)T(0.042)S(0.001)FER 95.815 0.035271 12956100.0 3059.7 3593.8 3363.0 2930.7 3252.3 3578.9 3576.3999999999996 3445.7 3648.7 3801.2 3576.0 True False 3370.318491567909 3896.6621384421956 3591.2334033618404 3111.7226828973785 3023.8696678259007 3549.754624980514 3712.5018590811724 3376.972810400643 3495.357827696041 3561.1915832831514 3136.1746701317084 1.0746590499777129 1.2424888752381096 1.1450999325911337 0.9922032444598173 0.9641904504314196 1.1318740179836466 1.1837675670421954 1.0767808446902678 1.114529066567982 1.13552080411822 1.0 11.614790197659593 -10.717555596621674 0.8049449413117601 0.9946745860216814 1.1041006535886733 0.0 0.08484926596940157 0.9971265179371913 1.0579077458039141 0.06955220189398244 0.01494129256705415 1.916215740850312e-11 10.717555596621674 0.10942606756699191 S(ph)TSFRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A549_MK2206_60min_R1 4 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.318)T(0.318)S(0.293)FRGGMGS(0.067)GGLAT(0.004)GIAGGLAGMGGIQNEK;S(0.608)T(0.163)S(0.145)FRGGMGS(0.024)GGLAT(0.061)GIAGGLAGMGGIQNEK;S(0.28)T(0.28)S(0.28)FRGGMGS(0.063)GGLAT(0.097)GIAGGLAGMGGIQNEK;S(0.335)T(0.335)S(0.314)FRGGMGS(0.008)GGLAT(0.009)GIAGGLAGMGGIQNEK 116.35 2.1914e-21 968771000.0 11217.600000000002 12649.2 12881.5 12231.099999999999 14848.1 12215.2 10937.8 11494.9 20294.7 17626.8 17132.3 True False 13110.85663601125 13292.990250898483 14708.290397663843 15227.720049074944 12663.964159159128 13507.804356206487 12925.056678823545 13124.337276654855 15697.98285397639 13644.893637655723 12877.877082574356 1.0180914565299082 1.0322345962507933 1.1421362623165818 1.1824712995343205 0.9833891159199925 1.048915459403205 1.0036636159785242 1.0191382626577479 1.2189884057224034 1.0595607917487622 1.0 13.652607164393816 S(ph)TSFRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A549_PD325901_60min_R1 4 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.287)T(0.287)S(0.269)FRGGMGS(0.074)GGLAT(0.084)GIAGGLAGMGGIQNEK;S(0.308)T(0.308)S(0.308)FRGGMGS(0.072)GGLAT(0.005)GIAGGLAGMGGIQNEK;S(0.281)T(0.281)S(0.281)FRGGMGS(0.157)GGLATGIAGGLAGMGGIQNEK;S(0.327)T(0.327)S(0.281)FRGGMGS(0.064)GGLATGIAGGLAGMGGIQNEK 122.96 1.1377e-21 48420800.0 5478.84 5807.76 6692.1 7359.9 8287.5 6614.030000000001 7398.499999999999 7048.0 7167.650000000001 7311.900000000001 7513.4 True False 6035.047803491165 6297.200317535491 7146.266148866413 7814.504307454335 7705.414590322896 6560.16753255466 7680.053966114543 6907.422110950965 6866.418596674302 6850.225386143343 6589.299431366773 0.9158861069149131 0.9556706874723564 1.0845259383491261 1.1859385643115972 1.169382977747699 0.9955789080287598 1.1655342189422286 1.0482786801385662 1.0420559375384233 1.0395984364490243 1.0 12.685909371956143 -9.447566600940947 1.043793415057332 1.0092106833940089 1.069573309090801 0.03573452828893209 0.08350272831082822 0.9046907833722314 2.0655106673067016 0.023667713516901286 0.01780306824373656 3.568070271837026e-10 9.447566600940947 0.06036262569679218 S(ph)TSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR ddPTM_A549_MK2206_60min_R1 12 STSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR 40 2 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.345)T(0.345)S(0.309)FRGGMGS(0.001)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.34)T(0.34)S(0.306)FRGGMGS(0.015)GGLAT(0.001)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.329)T(0.329)S(0.329)FRGGMGS(0.009)GGLAT(0.003)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.335)T(0.335)S(0.317)FRGGMGS(0.013)GGLAT(0.001)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.322)T(0.322)S(0.299)FRGGMGS(0.047)GGLAT(0.009)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.332)T(0.332)S(0.332)FRGGMGS(0.002)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.332)T(0.332)S(0.332)FRGGMGS(0.005)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.342)T(0.342)S(0.309)FRGGMGS(0.006)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.33)T(0.33)S(0.33)FRGGMGS(0.011)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.318)T(0.318)S(0.29)FRGGMGS(0.069)GGLAT(0.005)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.348)T(0.348)S(0.304)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.325)T(0.325)S(0.325)FRGGMGS(0.026)GGLATGIAGGLAGMGGIQNEKETMQSLNDR 179.89 4.421999999999999e-67 787027200.0 14397.089999999998 19599.34 18162.35 16896.629999999997 22780.999999999996 15616.129999999997 14467.530000000002 11662.38 24677.24 25821.600000000002 26393.199999999997 True False 16826.966816944016 20596.862690450354 20738.044335210176 21036.305108518547 19429.94507780821 17268.61851145185 17096.092930258386 13315.558079540835 19087.88454145468 19988.482626119956 19839.040024736983 0.8481744477536584 1.0381985552107589 1.0453149098621828 1.0603489424028942 0.9793792972634422 0.8704361949933002 0.8617399283907659 0.6711795562153148 0.9621375085515379 1.007532753661298 1.0 14.276054597559598 -7.007861108323112 23.628382393683545 0.9382255418168717 1.0062095216525293 0.11430589404288105 0.10505801410264615 415.3162545663364 1248343.6034106668 0.01673400804954852 0.030633437098085064 9.820619659472674e-08 7.007861108323112 0.06798397983565763 S(ph)TSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR ddPTM_A549_PD325901_60min_R1 15 STSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR 40 2 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.327)T(0.327)S(0.305)FRGGMGS(0.039)GGLAT(0.003)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.308)T(0.308)S(0.283)FRGGMGS(0.095)GGLAT(0.005)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.333)T(0.333)S(0.333)FRGGMGS(0.002)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.322)T(0.322)S(0.322)FRGGMGS(0.032)GGLAT(0.001)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.33)T(0.33)S(0.33)FRGGMGS(0.01)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.343)T(0.343)S(0.308)FRGGMGS(0.005)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.343)T(0.343)S(0.308)FRGGMGS(0.006)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.301)T(0.301)S(0.285)FRGGMGS(0.094)GGLAT(0.019)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.322)T(0.322)S(0.322)FRGGMGS(0.034)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.323)T(0.323)S(0.323)FRGGMGS(0.028)GGLAT(0.003)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.324)T(0.324)S(0.324)FRGGMGS(0.028)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.309)T(0.309)S(0.309)FRGGMGS(0.059)GGLAT(0.013)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.262)T(0.262)S(0.234)FRGGMGS(0.234)GGLAT(0.008)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.34)T(0.34)S(0.308)FRGGMGS(0.012)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.397)T(0.302)S(0.302)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR 180.49 1.7649999999999995e-67 1437280000.0 29184.85 30809.889999999996 33179.479999999996 34120.0 36103.3 48323.700000000004 39069.99999999999 46161.5 43260.76 40830.829999999994 40895.05 True False 32147.67448724896 33406.34755761836 35431.23903722154 36227.51490785772 33567.52875762349 47930.16780887167 40556.83022992432 45240.77266950381 41442.66070054533 38252.76442556697 35865.21810508102 0.896346828090099 0.9314413608120703 0.9878997231638751 1.0101016199515425 0.93593544194474 1.3363969422531246 1.1308123126728915 1.2614107779005688 1.1555111857712128 1.0665699651816063 1.0 15.130297783724915 S(ph)TSGSPRPAGAKPK ddPTM_A549_MK2206_60min_R1 1 STSGSPRPAGAKPK 14 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 S(0.257)T(0.257)S(0.257)GS(0.229)PRPAGAKPK 43.791000000000004 0.021523 19543000.0 600.22 455.78 475.81 392.51 697.94 472.22 677.94 484.48 754.56 796.9 805.24 True False 701.5224620299059 478.9772552062193 543.2870127013489 488.67496762044357 595.2739505555271 522.1900069657332 801.1129226025013 553.1565236577736 583.653364784718 616.8797365289131 605.276684506586 1.1590112092319866 0.7913360409655885 0.8975845701775704 0.8073579903689918 0.9834741132326731 0.8627294266115934 1.3235482930513978 0.9138903543074683 0.9642753136286836 1.0191698314495392 1.0 9.241450968718798 S(ph)TSGSPRPAGAKPK ddPTM_A549_PD325901_60min_R1 1 STSGSPRPAGAKPK 14 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 S(0.25)T(0.25)S(0.25)GS(0.25)PRPAGAKPK 54.233999999999995 0.0060239 36052000.0 398.71 610.59 453.42 619.05 558.37 741.21 567.62 469.63 603.82 548.5 562.96 True False 439.18674568521124 662.0465621657912 484.1918078359574 657.2873125354433 519.1520174719268 735.1738315073919 589.2210897135825 460.2628612323921 578.4435452406123 513.8676163924046 493.7194888974682 0.8895471124017511 1.3409366594869823 0.9807022382632956 1.3312970772193755 1.0515121018035005 1.4890516741583744 1.1934329167952844 0.9322355539584055 1.1716036296892847 1.0408088559354411 1.0 8.94754778437934 -10.842810974742601 0.4905760090628167 0.9585052615601719 1.1701072979554974 0.07760850438554323 0.17612120452360971 3.156162036952604 0.937546308685047 0.32652770057169345 0.04034785701673403 1.4361143614387536e-11 10.842810974742601 0.2116020363953255 S(ph)TSLEPVER ddPTM_A549_MK2206_60min_R1 2 STSLEPVER 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 S(0.982)T(0.009)S(0.009)LEPVER;S(0.954)T(0.043)S(0.002)LEPVER 82.26100000000001 0.0015272999999999999 10506900.0 749.86 884.01 899.38 672.21 1229.74 639.31 482.67 849.4300000000001 1284.15 1134.67 995.83 True False 876.4180356831581 929.0023330880023 1026.9256078757055 836.9014801766541 1048.8468750267275 706.9613598603677 570.3648912183221 969.8393037702741 993.2920753661688 878.3472589374607 748.5379274901809 1.1708398512574432 1.2410891939743276 1.3719085836023672 1.1180481969467504 1.4011940297313605 0.9444562979337362 0.7619719325789327 1.2956448406323355 1.3269762812108121 1.17341717323867 1.0 9.54793160748224 -11.104253929648351 1.4647685636686598 1.0006610897096888 1.1971314054224584 0.0013876064608606686 0.187750170240444 0.7145644679316645 2.7564091332083587 0.13493214201054177 0.029807987875779783 7.865857427604294e-12 11.104253929648351 0.19647031571276963 S(ph)TSLEPVER ddPTM_A549_PD325901_60min_R1 3 STSLEPVER 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 S(0.499)T(0.116)S(0.385)LEPVER;S(0.991)T(0.008)SLEPVER;S(0.974)T(0.026)S(0.001)LEPVER 106.62 0.0005195 9863500.0 1141.17 1552.0900000000001 1500.5300000000002 1415.73 1822.66 1591.37 1120.4299999999998 1595.95 2248.61 2158.03 2097.01 True False 1257.0207383150482 1682.8900713603289 1602.364989219905 1503.1764267438857 1694.6426494356467 1578.4104103370425 1163.0685767728219 1564.1175252514458 2154.108741451911 2021.7716175082974 1839.0910640416373 0.6835010853418997 0.9150661999639992 0.871280939019139 0.8173474691571083 0.9214566274447842 0.8582557118559884 0.6324148920700154 0.8504840004029479 1.171289874421978 1.0993319781920947 1.0 10.844777202361142 -8.691269118809789 7.101269577885735 1.0806871134917433 0.8209963621147941 0.6338983726415004 0.09190146314703401 0.1143608196642789 9.606971695199675 0.017111354209201637 0.0193705568292618 2.0357801769813687e-09 8.691269118809789 -0.2596907513769492 S(ph)TSLNERPK ddPTM_A549_MK2206_60min_R1 1 STSLNERPK 9 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9 P49815 TSC2 Tuberin 1 S(0.468)T(0.295)S(0.236)LNERPK 92.925 0.00027636 122010000.0 1831.2 2455.8 3566.8 5064.5 10242.0 7652.9 8220.3 8053.6 12062.0 11721.0 13467.0 True False 2140.2617914584057 2580.7897304301036 4072.625873569642 6305.302727354044 8735.415367495356 8462.724798416117 9713.822104713307 9195.222463115599 9329.976259055975 9073.217959411963 10122.772229708144 0.2114304009703193 0.25494890844783064 0.40232317601865697 0.6228829992686535 0.8629469446975013 0.8360086156616122 0.9596009753341425 0.9083699854600712 0.9216819313265309 0.8963175060665727 1.0 13.305316821197446 -6.353451693116644 0.948670672355605 0.9573442591159022 0.15912208430065583 0.9797607406528774 0.039825839813392154 0.06156436847584381 0.09254019698742473 0.006364486220861692 0.033891556620114616 4.43147503359244e-07 6.353451693116644 -0.7982221748152463 down S(ph)TSLSSPR ddPTM_A549_MK2206_60min_R1 1 STSLSSPR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 S(0.356)T(0.356)S(0.287)LS(0.001)SPR 86.67 0.0027485 5740700.0 1703.1 1604.2 1513.9 1644.4 1640.5 1128.6 1467.6 1655.8 2013.2 2065.9 2866.5 True False 1990.5416432027139 1685.8469279078001 1728.5937843436923 2047.2780738199206 1399.18462315721 1248.0277028959513 1734.2439230778982 1890.514720674829 1557.213414419787 1599.211755170136 2154.6689386246676 0.9238271399936193 0.7824157566330733 0.8022549326984123 0.9501589952499641 0.6493733668664264 0.5792201672023785 0.8048772096677052 0.8774038028698511 0.722715859733775 0.7422076433658148 1.0 11.073250503259358 -10.868468878608224 0.9849520641703264 1.0070608632778129 0.7813905590035385 0.0 0.1289448347486131 0.5293594870508059 0.8631685434802279 0.08796973157611282 0.01874033886247814 1.3537270948093391e-11 10.868468878608224 -0.22567030427427437 S(ph)TSPDHT(ph)R ddPTM_A549_PD325901_60min_R1 1 STSPDHTR 8 0 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 2 S(0.888)T(0.165)S(0.279)PDHT(0.669)R 54.784 0.033925 12677000.0 1184.8 681.06 647.16 591.95 1208.7 923.31 845.77 897.42 846.86 864.64 1106.9 True False 1305.0800237963392 738.4553163802778 691.08016928922 628.5134070840085 1123.8050817886306 915.7908694824542 877.9562401731026 879.5202540876292 811.2694192349788 810.0464828396146 970.7583172172223 1.3443923174796835 0.7606994483417204 0.711897242632205 0.6474458121416937 1.157656918160776 0.9433767944504068 0.9044024909205556 0.9060136168689893 0.8357068951627068 0.8344471208464074 1.0 9.922968352615804 -6.751332577815944 24.993684806614706 0.9332859029019854 0.8475644803738586 0.03061132139380429 0.18795559210334795 593.2566276142265 1467087.9869400263 0.02580772462478898 0.05324093549431251 1.772831346684633e-07 6.751332577815944 -0.08572142252812687 S(ph)TSPFGIPEEASEMLEAKPK ddPTM_A549_MK2206_60min_R1 3 STSPFGIPEEASEMLEAKPK 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 S(0.343)T(0.343)S(0.312)PFGIPEEAS(0.003)EMLEAKPK;S(0.33)T(0.33)S(0.33)PFGIPEEAS(0.009)EMLEAKPK;S(0.34)T(0.34)S(0.309)PFGIPEEAS(0.012)EMLEAKPK 52.06100000000001 0.0027423 15912800.0 3741.38 3799.02 3512.1400000000003 3800.7 6136.9 4422.2 3819.3 3928.7999999999997 6179.9 5252.4 5982.2 True False 4372.833476041203 3992.3738910736097 4010.2142636533845 4731.871670619908 5234.170139502271 4890.154268781214 4513.217372180034 4485.719431445385 4780.162517272422 4065.8791920497756 4496.6546396792255 0.9724637150148459 0.8878542407602845 0.8918217174756072 1.0523093387837903 1.16401426369619 1.08750941769681 1.0036833454707987 0.9975681458528423 1.0630486217668298 0.9042009044172047 1.0 12.1346363684121 -6.2645879778480325 24.93124004760988 1.041123285277101 0.9144273226240911 0.38790208523409475 0.06479530261631634 160.8609698128902 1273734.9642123682 0.007748419667904014 0.018748990704104056 5.43765966366162e-07 6.2645879778480325 -0.12669596265300997 S(ph)TSPFGIPEEASEMLEAKPK ddPTM_A549_PD325901_60min_R1 3 STSPFGIPEEASEMLEAKPK 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 S(0.346)T(0.346)S(0.307)PFGIPEEASEMLEAKPK;S(0.343)T(0.343)S(0.312)PFGIPEEAS(0.003)EMLEAKPK;S(0.333)T(0.333)S(0.333)PFGIPEEAS(0.001)EMLEAKPK 74.579 8.8029e-05 68601000.0 5412.200000000001 5420.7 5283.5 5664.3 5856.6 6416.400000000001 6033.5 6658.400000000001 6822.8 6535.400000000001 6612.6 True False 5961.642559748942 5877.5214129483065 5642.070082266512 6014.1709464413425 5445.252620173157 6364.1469657506395 6263.108144157882 6525.592988586253 6536.061442926123 6122.7537286616625 5799.292120725093 1.0279948717264393 1.013489455367086 0.9728894431965736 1.0370525956001304 0.9389512559150633 1.0974006539534211 1.0799780410742263 1.1252395728205444 1.1270446990535306 1.055776050111462 1.0 12.501661095894434 -7.279671462824518 24.94320129143475 1.0708307710567695 0.9996980150867534 0.4883998116158158 0.04150438139834464 803.6210601194128 1099426.174099259 0.008271217390017823 0.013237437696584215 5.2520461932128724e-08 7.279671462824518 -0.07113275597001611 S(ph)TSPIIGS(ph)PPVR ddPTM_A549_MK2206_60min_R1 1 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 S(0.934)T(0.012)S(0.054)PIIGS(1)PPVR 140.84 1.3371999999999999e-11 10649000.0 2240.1 2598.7 2369.7 1957.0 3623.6 3153.0 2863.2 2853.3 3965.0 3357.9 4047.4 True False 2618.174114813222 2730.962730054853 2705.7590929118487 2436.4650878530683 3090.573240153895 3486.6483672079908 3383.406378138894 3257.764012864775 3066.9338308039232 2599.3480578371677 3042.318877442696 0.8605850406496507 0.8976582797758658 0.8893739288717324 0.8008578936015759 1.0158610470023315 1.1460496113868208 1.1121143162293718 1.0708160926257597 1.0080908525216523 0.8543969789327674 1.0 11.570955660208037 -6.822495032419882 8.209200367169979 1.029259131994412 0.8668032649887294 0.5428625871349703 0.07391584495448883 0.1295149813446281 15.563266669806342 0.008793673874798255 0.016693995791502693 1.5048907320595036e-07 6.822495032419882 -0.1624558670056826 S(ph)TSPIIGS(ph)PPVR ddPTM_A549_PD325901_60min_R1 1 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 S(0.95)T(0.011)S(0.04)PIIGS(1)PPVR 146.84 7.3288e-12 19259000.0 4671.0 5564.0 4937.1 5120.2 5770.8 5419.8 4550.2 4694.9 5302.0 5799.3 6015.9 True False 5145.196481391545 6032.897806859698 5272.161295194096 5436.463125182098 5365.478916179227 5375.662945728962 4723.360350964981 4601.256536422202 5079.175378201662 5433.131208285269 5275.98243793214 0.9752110705296708 1.1434643458032856 0.9992757476388527 1.0304172140711023 1.016962997754436 1.0188932599699652 0.8952570268251778 0.8721136945682502 0.962697552153412 1.0297856886754009 1.0 12.3652240469865 -7.5437456750729215 24.587382790433523 0.9655854707625174 1.0352503997276619 0.30953667365909 0.057179441928483406 208.52008981384756 245697.04617109327 0.008713503927440934 0.012925051635404715 2.859264452149856e-08 7.5437456750729215 0.06966492896514442 S(ph)TSPSAAGGQQK ddPTM_A549_MK2206_60min_R1 1 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 S(0.472)T(0.472)S(0.054)PS(0.002)AAGGQQK 93.62299999999999 0.00026395 8303500.0 1354.6 2284.1 1565.4 1709.5 2867.9 1852.9 1943.2 2029.3 2321.7 2554.3 2676.6 True False 1583.2233632096743 2400.350933820101 1787.397258743389 2128.3275767423715 2446.035709084156 2048.9726481445223 2296.2542868117835 2316.9594894706083 1795.8386569930565 1977.2818559616046 2011.9263495980408 0.7869191451893772 1.1930610354100004 0.888400939279159 1.0578556104539245 1.2157680173396235 1.0184133472648653 1.1413212453182235 1.1516124782269042 0.89259661883341 0.9827804364491982 1.0 10.974361778168113 -8.771682521845676 24.98955218276685 0.9492817392291067 1.0624958592379123 0.10780645540013845 0.12425009393783873 277.93150902222305 678050.2565964251 0.020416008048326873 0.021853189081202453 1.691677130348235e-09 8.771682521845676 0.1132141200088056 S(ph)TSPVTDPSIPIRK ddPTM_A549_MK2206_60min_R1 1 STSPVTDPSIPIRK 14 1 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.333)T(0.333)S(0.294)PVT(0.038)DPS(0.001)IPIRK 63.681999999999995 0.0023001 4938600.0 1242.0 1190.6 1131.8 1041.1 1338.0 1331.0 1343.6 899.06 1488.3 1452.6 2170.0 True False 1451.6192360153668 1251.196454536233 1292.3062587490533 1296.1695467367545 1141.1819724378822 1471.8455365537047 1587.714728159897 1026.5045082557754 1151.202426326729 1124.4566511254852 1631.1291110467582 0.8899474763734717 0.7670738300619822 0.7922771103752362 0.7946455850481098 0.6996270035947932 0.9023476600262287 0.9733838464454844 0.6293214321930825 0.7057702658423882 0.6893731731658435 1.0 10.671655266892587 -10.92451762067142 1.2031706080396576 0.999028576490492 0.787267471626931 0.0 0.13079615559066604 0.38802376905982944 1.0054605338984202 0.06694384803804561 0.016108204364793283 1.1898230533765159e-11 10.92451762067142 -0.21176110486356103 S(ph)TSPVTDPSIPIRK ddPTM_A549_PD325901_60min_R1 1 STSPVTDPSIPIRK 14 1 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.332)T(0.332)S(0.332)PVT(0.004)DPSIPIRK 68.48100000000001 0.0013652999999999998 23773000.0 2435.0 2555.3 2763.3 2433.7 3464.5 2980.1 2669.9 2475.0 2951.7 3174.9 3212.8 True False 2682.199407447744 2770.6440988261297 2950.8341550727837 2584.024121666275 3221.1654718761565 2955.831053649004 2771.5045055253377 2425.63418340006 2827.650313813248 2974.4362721681764 2817.645967617213 0.9519291771478261 0.9833187457433372 1.0472693123927856 0.9170861603494834 1.1432115705438275 1.0490427426369144 0.9836241094082889 0.8608725905516569 1.0035506044091462 1.0556458498877896 1.0 11.460274635539685 -7.837667307874728 24.99998461166235 0.9876879529945929 1.016659810953605 0.052438679248466236 0.07028364269249493 108.62797545530981 35622.269632633805 0.01056453864217011 0.014597012999832602 1.4532244366765522e-08 7.837667307874728 0.028971857959012026 S(ph)TSRDRLDDIIVLTK ddPTM_A549_MK2206_60min_R1 3 STSRDRLDDIIVLTK 15 2 G5E9N8;Q7Z3D4-2;Q7Z3D4-3;Q7Z3D4 G5E9N8 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 1 S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK;S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK;S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK 105.38 1.7006e-06 35207700.0 1937.79 2486.75 2395.1099999999997 1692.1399999999999 3039.48 2237.26 2165.16 2089.6800000000003 2668.85 2679.6 2552.2799999999997 True False 2264.841577583105 2613.314953231965 2734.7726129991543 2106.714375963051 2592.3765183748087 2474.0053682270063 2558.5415457150066 2385.8985393766015 2064.359736277692 2074.276498936976 1918.4784366554914 1.180540544167613 1.3621810406103867 1.4254904098722732 1.0981173078159345 1.3512669565857267 1.2895664193859653 1.3336305985150116 1.2436410510487519 1.0760401038838452 1.081209180830351 1.0 10.905746834067209 -8.77648253463107 2.2892893410343707 1.0298993276974404 1.2951695311333038 0.5942662125705822 0.08647569919706619 0.12337161007772415 1.2664384528101955 0.015183657081199462 0.01634706530137253 1.6730829189087535e-09 8.77648253463107 0.2652702034358634 S(ph)TSRDRLDDIIVLTK ddPTM_A549_PD325901_60min_R1 7 STSRDRLDDIIVLTK 15 2 G5E9N8;Q7Z3D4-2;Q7Z3D4-3;Q7Z3D4 G5E9N8 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 1 S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK;S(0.353)T(0.353)S(0.294)RDRLDDIIVLTK;S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK;S(0.352)T(0.352)S(0.297)RDRLDDIIVLTK;S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK;S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK;S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK 103.1 2.0609e-06 77304700.0 6015.2699999999995 6264.849999999999 6131.93 6482.109999999999 7638.56 6015.34 6934.159999999999 6963.0599999999995 7178.339999999999 6637.630000000001 7139.7300000000005 True False 6625.935782192274 6792.810895992982 6548.079644090561 6882.495212760072 7102.053897201429 5966.35306541962 7198.043253317945 6824.176305885098 6876.659333149778 6218.528909014981 6261.588472477477 1.0581876805408514 1.084838284382704 1.0457537528811327 1.0991612181176968 1.1342255928217224 0.9528497587544199 1.1495554658305336 1.0898474621704142 1.0982292054765044 0.9931232204652601 1.0 12.612312978666372 -10.798613993649429 1.018022751884544 0.9994673334637698 1.0801530310850773 0.2923117388989046 0.04918468767570638 0.5598701198245533 1.0191911553321875 0.032721196527150186 0.007969665192367553 1.589959296406989e-11 10.798613993649429 0.0806856976213075 S(ph)TSSDPGSR ddPTM_A549_MK2206_60min_R1 1 STSSDPGSR 9 0 H7C120;A0A0B4J1X7;E9PCM6;E7EQN5;P98171;P98171-2 H7C120 ARHGAP4 Rho GTPase-activating protein 4 1 S(0.917)T(0.028)S(0.028)S(0.028)DPGSR 61.593 0.012137 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)TSSDPGSR ddPTM_A549_PD325901_60min_R1 1 STSSDPGSR 9 0 H7C120;A0A0B4J1X7;E9PCM6;E7EQN5;P98171;P98171-2 H7C120 ARHGAP4 Rho GTPase-activating protein 4 1 S(0.84)T(0.053)S(0.053)S(0.053)DPGSR 53.833 0.021031 53499000.0 20118.0 19758.0 22828.0 22152.0 25516.0 24721.0 22825.0 23773.0 24972.0 27892.0 27186.0 True False 22160.36454991115 21423.07600070703 24377.245355915573 23520.278729157795 23723.844185421287 24519.68037222142 23693.61786531926 23298.828865442287 23922.51368246923 26130.894359921505 23842.29434625297 0.929456042614198 0.8985324855732209 1.0224370608756734 0.9864939333262706 0.9950319311090001 1.0284111091043093 0.9937641705628436 0.9772058228575602 1.003364581237496 1.0959890847932683 1.0 14.54123545271082 -5.758988679541905 24.9999750548238 1.000858359881415 0.9139942405881037 0.5558029414099508 0.032487565754658575 15.489052292725894 157995.5309276586 0.0019208050866197385 0.0067957364297732 1.7418522764753103e-06 5.758988679541905 -0.08686411929331117 S(ph)TSTPNVHMVSTTLPVDSR ddPTM_A549_MK2206_60min_R1 2 STSTPNVHMVSTTLPVDSR 19 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.306)T(0.306)S(0.295)T(0.093)PNVHMVSTTLPVDSR;S(0.333)T(0.333)S(0.278)T(0.056)PNVHMVSTTLPVDSR 104.53 5.421e-10 28169600.0 4633.0 5393.6 5132.9 5034.0 6637.6 5418.6 4893.5 5495.6 9161.2 7602.1 8281.6 True False 5414.937134025115 5668.111202071754 5860.822402838853 6267.33022598485 5661.217832775554 5991.992655424424 5782.585607510019 6274.618129569145 7086.202827430244 5884.78033011225 6225.050159467666 0.8698624099903111 0.9105326152996751 0.9414899884662199 1.0067919238293814 0.9094252556608591 0.9625613451983539 0.9289219298442594 1.0079626619596134 1.138336663304287 0.9453386204707283 1.0 12.603869746665891 -8.457456414041658 4.139441386799372 1.0657489922213947 0.9359985666695152 0.31233310131699366 0.05713218345719304 0.13637648440094427 4.598382162124432 0.00971147846913377 0.011647130325209419 3.48773585427667e-09 8.457456414041658 -0.12975042555187954 S(ph)TSTQGLEHDLDDVNAR ddPTM_A549_PD325901_60min_R1 1 STSTQGLEHDLDDVNAR 17 0 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-8;A0A0U1RQJ2;F6QMI7 F8W9J4;F6QMI7 DST Dystonin 1 S(0.316)T(0.316)S(0.316)T(0.053)QGLEHDLDDVNAR 55.588 0.0033213 424650.0 235.69 0.0 106.61 239.96 280.8 242.88 234.71 177.32 231.11 152.6 257.43 True False 259.6170752941925 0.0 113.84519569800939 254.78178421129954 261.0775767074111 240.90206580660728 243.64201748824019 173.783213495151 221.39725040667412 142.96480995712108 225.767741983223 1.149929892612758 0.0 0.504258025074589 1.1285127891753135 1.156398936420297 1.0670349257623746 1.079171077975991 0.7697433298866273 0.9806416473046284 0.6332384276924067 1.0 7.818695556286803 -6.251793518767527 23.61707403090709 1.0058300183480615 0.49625624966556 0.29277351974237376 0.28852295318123783 213.33550614925335 522330.0797162948 0.03289852891575446 0.08570450250055238 5.600237962643152e-07 6.251793518767527 -0.5095737686825015 S(ph)TSVPENPK ddPTM_A549_MK2206_60min_R1 2 STSVPENPK 9 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 S(0.988)T(0.012)SVPENPK;S(0.983)T(0.016)SVPENPK 123.79 9.5688e-05 5059100.0 2780.2 3236.7 2649.0 3206.1000000000004 4726.200000000001 3289.3999999999996 3073.9 2924.5 4280.299999999999 3969.8 5030.1 True False 3249.429790636006 3401.4342049365264 3024.6680327144727 3991.594643927297 4030.982240759283 3637.482124672997 3632.3878407939164 3339.0568309056293 3310.8188842345585 3073.019422854161 3780.987346302443 0.8594130297245599 0.8996153367883936 0.7999677744683276 1.0557016668756678 1.0661189450161261 0.9620455694542897 0.9606982272358444 0.8831176952155123 0.8756492897211946 0.812755807252138 1.0 11.88454730577849 -5.013260450076116 0.007373244070641967 1.818811644841897 4.2985563266898397e-07 0.0 0.08914606085427007 28804.686792765544 29.070638980974667 3371.7984633603114 3810.2717920000664 9.699281186921547e-06 5.013260450076116 -1.8188112149862643 S(ph)TTELDDYSTNK ddPTM_A549_MK2206_60min_R1 2 STTELDDYSTNK 12 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.986)T(0.012)T(0.003)ELDDYSTNK;S(0.979)T(0.02)TELDDYSTNK 170.95 1.1136e-15 10062000.0 4092.6000000000004 5787.1 4589.8 5811.0 7876.1 6090.0 4705.5 5505.7 8020.9 7666.3 9477.3 True False 4783.330825536625 6081.638671297361 5240.702656305357 7234.695260865707 6717.536123406583 6734.439757785171 5560.4284410214295 6286.149835499098 6204.178956745321 5934.477505523413 7123.8248498264675 0.6714554226656968 0.8537041265754177 0.7356585495547406 1.0155633263557764 0.9429676143104808 0.945340445582294 0.7805397463073336 0.8824121827829927 0.8709056002263238 0.8330465207420104 1.0 12.79843633066463 -2.0000000015425594 0.03209113111190785 1.4471223540247258 7.126354582226302e-11 0.10430749466252631 0.09727654760964083 872.6396234932582 2.08589978580303 28.751027395886503 75.97150927452223 0.009999999964481258 2.0000000015425594 -1.4471223539534623 S(ph)TTELDDYSTNK ddPTM_A549_PD325901_60min_R1 1 STTELDDYSTNK 12 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.464)T(0.464)T(0.072)ELDDYSTNK 70.977 0.0027562 6987700.0 3535.4 3533.6 3244.2 4006.7 3719.0 3426.2 2885.3 3764.9 3502.0 3878.6 4840.2 True False 3894.3112053760783 3831.3888731702805 3464.370920959404 4254.184759124077 3457.790269853496 3398.2981631529883 2995.101670396742 3689.806115993089 3354.8231185330465 3633.7045340739824 4244.8860845557865 0.9174124176252436 0.9025893267454368 0.8161281249840511 1.0021905592713363 0.8145778711080164 0.8005628644587311 0.7055788095925241 0.8692356031455707 0.7903211185663932 0.8560193281262665 1.0 12.051510122904098 -10.886295838184601 1.1220539244415881 1.0004635960579622 0.841954617547593 0.02898473320144246 0.08467970143344336 0.4358961420378533 0.9697325642207035 0.05393620868923411 0.012794179403210386 1.2992842137320862e-11 10.886295838184601 -0.15850897851036916 S(ph)TTHLI ddPTM_A549_MK2206_60min_R1 1 STTHLI 6 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3 Q9H8V3-2 ECT2 Protein ECT2 1 S(0.428)T(0.428)T(0.145)HLI 65.672 0.057013 9888700.0 156.05 195.82 189.28 227.33 311.67 145.76 178.87 165.11 245.25 265.59 139.96 True False 182.3874249437987 205.78640158515478 216.1227501820293 283.0258602052313 265.8237558667526 161.18422645234267 211.3683636692176 188.51484812816835 189.7012665837736 205.5930345397342 105.20406930050883 1.733653708991241 1.956068837958528 2.0543193017057946 2.690255824580185 2.5267440473946277 1.5321101885510724 2.0091272616599753 1.7918969235846525 1.8031742293342647 1.9542308192705984 1.0 6.71704669902587 -10.171327932469795 0.385368213294555 0.8116463365504826 2.1448258615264546 0.09087539400943123 0.4117271625501059 0.8884878916329159 0.22487887592951597 0.4765133979464451 0.117664663361134 6.740188889471138e-11 10.171327932469795 1.333179524975972 S(ph)TTPAEQR ddPTM_A549_PD325901_60min_R1 2 STTPAEQR 8 0 R4GN18;P15529-16;P15529-7;P15529-4;P15529-6;P15529-3;P15529-5;P15529-2 R4GN18 CD46 1 S(0.823)T(0.172)T(0.005)PAEQR;S(0.858)T(0.125)T(0.017)PAEQR 61.78 0.010672 3945000.0 1213.1399999999999 1279.02 1218.83 1045.8 1509.05 1520.25 1098.1999999999998 1016.8700000000001 1337.44 1252.49 1363.09 True False 1336.297079733533 1386.80750412108 1301.5471332201935 1110.396690815874 1403.0595339398808 1507.869588037282 1139.9926019580985 996.5877301309175 1281.2320478728834 1173.40756764872 1195.4385713394383 1.1178299845522541 1.1600826151754673 1.0887611998012285 0.9288613546840149 1.1736776506782878 1.2613526317356298 0.9536187214377607 0.8336586705699843 1.0717673652083328 0.9815707772704427 1.0 10.22332428246495 -7.804420777358215 24.999995919132292 1.0110750867060887 1.1155952903501531 0.35079040577607945 0.09612832381700785 173.35076617335642 100828.3175978965 0.015912146959550302 0.021985882764520005 1.5688420548429997e-08 7.804420777358215 0.10452020364406445 S(ph)TTPGGTGIKPFLER ddPTM_A549_PD325901_60min_R1 1 STTPGGTGIKPFLER 15 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.356)T(0.356)T(0.276)PGGT(0.012)GIKPFLER 62.203 0.0013772 20936000.0 2081.6 1999.4 1723.4 1576.6 1967.5 1603.3 1691.0 2039.0 1549.3 1874.9 2173.4 True False 2292.9224996070716 2167.8964548949098 1840.3602876460882 1673.9830012816076 1829.3095875065208 1590.2432563724212 1755.3519303507062 1998.3305454354436 1484.1883088358798 1756.5184940275635 1906.0855783177444 1.2029483490613984 1.1373552581034856 0.9655181847975244 0.8782307679800065 0.959720596134522 0.8342979320875632 0.9209197899183145 1.0483949766825853 0.7786577505852498 0.9215318105380219 1.0 10.89639717864393 -5.756527677189581 2.4460147484652426 0.905314361924632 1.1981515619110474 0.6510228945586494 0.07071103613881914 0.16008906910095388 1.8405843400056197 0.012423496507023929 0.06375088421755865 1.751750793177512e-06 5.756527677189581 0.29283719998641544 S(ph)TTPPPAEPVSLPQEPPK ddPTM_A549_PD325901_60min_R1 1 STTPPPAEPVSLPQEPPK 18 0 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPK 112.3 1.3997999999999999e-09 25448000.0 4594.0 4753.8 4083.3 4961.1 6102.9 4787.7 4214.8 4474.8 5368.3 5092.2 5062.5 True False 5060.379498075949 5154.419409462549 4360.417292877607 5267.535879524416 5674.253357862034 4748.710558556873 4375.196520427056 4385.54660358731 5142.689019766119 4770.67762295971 4439.84459383159 1.1397650055379163 1.160945907121105 0.9821103420907269 1.1864234813179637 1.2780297233253266 1.0695668414057555 0.9854391134558288 0.9877702948612845 1.1583038349835515 1.0745145516101524 1.0 12.116293464022986 -7.484602258752275 24.99232100143926 1.0611276564700725 1.145944990076932 0.28273111021650366 0.08014700339001984 786.5730605748792 513587.0115006789 0.01377447455718452 0.022017055430349635 3.2764062163212656e-08 7.484602258752275 0.08481733360685961 S(ph)TTPPPAEPVSLPQEPPKPR ddPTM_A549_MK2206_60min_R1 1 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.352)T(0.352)T(0.296)PPPAEPVSLPQEPPKPR 94.389 6.467e-07 5745100.0 1233.3 1905.4 1857.8 1446.6 2682.5 1706.2 2033.3 1823.6 2336.4 2386.8 2476.9 True False 1441.450888709944 2002.3767213785811 2121.263975529237 1801.0170649403408 2287.907803486262 1886.748951516102 2402.7242905384933 2082.1008845407773 1807.2091304641333 1847.6202222954082 1861.8173710376566 0.7742171230825784 1.0754957776887568 1.13935126426873 0.9673435713711116 1.2288572655282135 1.0133909914400197 1.2905263039840316 1.1183163917846297 0.9706693892628748 0.9923745749915655 1.0 10.862495847988235 -8.768016829046037 24.77477600859015 0.9861494275267108 1.0845820425373673 0.082174650244209 0.12900255619085477 225.08938432371852 847824.8022573706 0.02120212541760198 0.022832121855465515 1.7060162790616534e-09 8.768016829046037 0.09843261501065659 S(ph)TTQANRMSVDAVEIETLR ddPTM_A549_PD325901_60min_R1 1 STTQANRMSVDAVEIETLR 19 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;P78347-5 P78347-2 GTF2I General transcription factor II-I 1 S(0.272)T(0.272)T(0.272)QANRMS(0.185)VDAVEIETLR 58.626999999999995 0.0013215 1752100.0 906.23 926.14 1105.3 957.46 1135.1 939.54 908.62 1023.3 1514.1 948.92 1024.6 True False 998.2298024687336 1004.1890680886132 1180.3123047088438 1016.60012965057 1055.3744918824148 931.8886977434942 943.1980313159419 1002.8894787366792 1450.467642424582 889.0050292563001 898.5806954745377 1.1108961137225093 1.1175279784508436 1.313529559062611 1.1313398282095373 1.17449050174072 1.0370673468022442 1.049653120822768 1.1160817095086337 1.6141762779119069 0.9893435656180208 1.0 9.811504258043476 S(ph)TVLGLPQHVQK ddPTM_A549_MK2206_60min_R1 3 STVLGLPQHVQK 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.5)T(0.5)VLGLPQHVQK;S(0.5)T(0.5)VLGLPQHVQK;S(0.5)T(0.5)VLGLPQHVQK 131.08 2.0874000000000002e-08 24192100.0 5907.72 7308.08 7756.74 7754.110000000001 10127.27 8006.92 7352.620000000001 6961.37 11757.28 9925.849999999999 9719.21 True False 6904.7987061132835 7680.030056666516 8856.762369225242 9653.867298095221 8637.56199851345 8854.206959836656 8688.49588014515 7948.165515801508 9094.274852518125 7683.5935911977795 7305.661920450118 0.9451297885528029 1.0512435615407363 1.2123148409637272 1.3214226723347233 1.1823106643266723 1.2119650561781168 1.189282500990661 1.0879459797548097 1.2448255820682443 1.0517313386333618 1.0 12.834799277210168 -10.965749362018448 1.1952529099151799 0.9987221321208226 1.1722430559287897 0.2073993154454986 0.09838018974169269 0.5185588840068288 1.3011524404743744 0.07470791781027579 0.016765751056198982 1.0820582434825599e-11 10.965749362018448 0.17352092380796713 S(ph)TVLGLPQHVQK ddPTM_A549_PD325901_60min_R1 4 STVLGLPQHVQK 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.5)T(0.5)VLGLPQHVQK;S(0.868)T(0.132)VLGLPQHVQK;S(0.5)T(0.5)VLGLPQHVQK;S(0.576)T(0.424)VLGLPQHVQK 156.6 2.6619e-14 78692700.0 5083.610000000001 5778.1 6323.6 6348.799999999999 7076.4 7875.1 6189.099999999999 6440.299999999999 7876.9 6562.599999999999 7281.2 True False 5599.6943448441125 6265.040765243714 6752.757522895907 6740.950956829049 6579.378076254712 7810.96779658108 6424.629587305473 6311.84316418239 7545.861285657609 6148.236316019679 6385.658559329699 0.8769172815641292 0.9811111425759279 1.0574880351267548 1.0556391160282528 1.0303366544147559 1.2232047366780907 1.006102898802636 0.9884404412698419 1.1816888133852395 0.9628194584624109 1.0 12.640619698839892 -5.109199896101414 1.0440848430854128 1.0804464101585467 0.7179702834747101 0.28844743297836584 0.07846697431024867 1.9592966656407917 1.3550626360235538 0.012187747895143897 0.847459734734238 7.776785205038654e-06 5.109199896101414 -0.36247612668383655 S(ph)VANPAFLK ddPTM_A549_MK2206_60min_R1 1 SVANPAFLK 9 0 Q99567;I3L4K7 Q99567 NUP88 Nuclear pore complex protein Nup88 1 S(1)VANPAFLK 59.426 0.009323399999999999 745440.0 773.26 1183.6 1012.2 996.23 1201.6 1040.0 1176.0 707.0 1786.6 1680.9 1490.4 True False 903.7673836080858 1243.8401844356515 1155.7451803373308 1240.3063947224637 1024.8462317498943 1150.0521097038718 1389.663977609436 807.2194150966933 1381.9379526139444 1301.1835225642496 1120.2925470525745 0.8067244453119374 1.1102815846701148 1.0316458708736662 1.107127239206972 0.9148023294863524 1.026564099466334 1.2404474003380297 0.7205434127187951 1.2335509651025922 1.161467623780582 1.0 10.12965980361502 S(ph)VAS(ph)SQPAKPTK ddPTM_A549_MK2206_60min_R1 1 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 S(0.999)VAS(0.839)S(0.161)QPAKPT(0.001)K 50.653 0.008328299999999999 7089500.0 3255.7 3586.8 3165.4 2772.1 4104.5 3471.0 3735.6 2848.6 4435.6 4618.0 5065.4 True False 3805.182565777154 3769.3527995385207 3614.301317763077 3451.264624444299 3500.7334871982725 3838.2989161366713 4414.310165610384 3252.397773471626 3430.9436821976997 3574.79059265971 3807.521382072003 0.9993857378435586 0.9899754778231314 0.9492530586384316 0.9064334190465311 0.9194258248113159 1.0080833516023278 1.15936582428545 0.8542034166336616 0.9010963663533323 0.9388760387510565 1.0 11.894636423205942 -5.676747462111395 5.4218779690338605 0.9576485349150865 0.9965927491845056 0.030491415189358606 0.07595186161795531 0.6624795267652676 31.563822762187616 0.010805950409723878 0.043583761248701225 2.105002121589416e-06 5.676747462111395 0.038944214269419075 S(ph)VASS(ph)QPAKPTK ddPTM_A549_PD325901_60min_R1 1 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 S(0.997)VAS(0.46)S(0.531)QPAKPT(0.012)K 56.215 0.0048981 15544000.0 3809.3 4429.1 3639.5 4046.3 4749.5 5415.6 4962.6 4414.8 5266.8 4488.6 4678.7 True False 4196.017331741554 4802.3558009278 3886.4983560914116 4296.230761185952 4415.9115048855 5371.497149136459 5151.454458638922 4326.7433506563975 5045.454711790366 4205.189029970735 4103.249560722934 1.0226083667702326 1.170378679107613 0.947175719774321 1.047031309601607 1.0761986175921212 1.309083707838155 1.2554572619588142 1.0544675108413555 1.2296241398735273 1.0248435947507517 1.0 12.002551186654731 -7.013987433529028 24.587820155685762 1.133709338780774 1.0501478851272636 0.16676343001239324 0.10296267141664751 991.5440306645448 1742990.4441076955 0.017251541142374434 0.030703271342855512 9.683058741434067e-08 7.013987433529028 -0.08356145365351031 S(ph)VASSQPAKPTK ddPTM_A549_MK2206_60min_R1 1 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.989)VAS(0.006)S(0.006)QPAKPTK 63.537 0.0020532 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)VASSQPAKPTK ddPTM_A549_PD325901_60min_R1 2 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.991)VAS(0.005)S(0.004)QPAKPTK;S(0.99)VAS(0.003)S(0.002)QPAKPT(0.005)K 67.997 0.0028748000000000003 1705700.0 802.64 704.64 636.97 855.18 849.43 917.21 845.55 841.23 710.57 712.26 852.32 True False 884.1234219276618 764.022485734295 680.1986146117727 908.0025263453036 789.768967174416 909.7405458600065 877.7278679527136 824.4510077178321 680.7072139737372 667.287782044948 747.4900433016375 1.1827895633532715 1.0221172744450673 0.9099768227110546 1.21473527906096 1.0565611866695028 1.2170604197504948 1.1742335243367528 1.1029591833441161 0.9106572322583418 0.8927045758329585 1.0 9.545910552262699 -8.748322341773193 23.96843641937631 0.9578103646190063 1.107866186570381 0.4195160698439445 0.09084153617201722 111.29155087006883 203359.8694374963 0.015516539789935212 0.01753607627603635 1.78516210114135e-09 8.748322341773193 0.15005582195137468 S(ph)VDEIAK ddPTM_A549_MK2206_60min_R1 1 SVDEIAK 7 0 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 S(1)VDEIAK 96.331 0.011781999999999999 1606700.0 892.07 1242.7 1203.8 874.65 1422.0 1030.7 949.18 968.27 1214.9 1295.2 1373.8 True False 1042.6296069824696 1305.948121999141 1374.5169414049394 1088.9392892645299 1212.8256837120102 1139.767989876712 1121.6337196150723 1105.5252377025108 939.727089796642 1002.6134204445331 1032.647545048864 1.009666475247499 1.2646600752218364 1.3310610653123651 1.0545120593038375 1.174481738253317 1.1037337912063492 1.0861728427989412 1.070573636671163 0.9100172602958881 0.9709154156727213 1.0 10.012132213815422 -8.060263756815553 1.0791931502352612 0.9585161608975824 1.177018161935032 0.4659030663818965 0.08778239310599513 0.2722090435495081 0.6293416564919655 0.01672240939838762 0.0241978723806463 8.704347947519258e-09 8.060263756815553 0.21850200103744954 S(ph)VDETLR ddPTM_A549_PD325901_60min_R1 2 SVDETLR 7 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 1 S(0.991)VDET(0.009)LR;S(1)VDETLR 76.679 0.01757 3396000.0 1011.62 894.69 724.05 758.48 795.09 621.3 650.74 697.12 1065.8000000000002 873.21 1119.9499999999998 True False 1114.3189176847175 970.0886662148279 773.1883870663513 805.3295869669383 739.245621311593 616.2403387913588 675.5042667985919 683.2153947199392 1021.0081324193376 818.0753715770494 982.2032499479876 1.1345094996821952 0.9876659095418374 0.7871979522642543 0.8199215254170503 0.7526401703015538 0.6274061288475595 0.68774387259904 0.6955947200908964 1.0395079964084877 0.8328982536154003 1.0 9.939877785954952 -8.776680666213295 24.98972939058884 1.0186565788251134 0.8046871625058396 0.12772454344151196 0.1470328819687529 209.04857055771674 342756.42359288805 0.025257102664852916 0.02693765942992607 1.6723198077577506e-09 8.776680666213295 -0.2139694163192738 S(ph)VDEVNYWDK ddPTM_A549_MK2206_60min_R1 1 SVDEVNYWDK 10 0 F5H5P2;P12694;P12694-2;F5GXU9 F5H5P2 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 1 S(1)VDEVNYWDK 137.16 1.5932e-16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)VDEVNYWDKQDHPISR ddPTM_A549_MK2206_60min_R1 2 SVDEVNYWDKQDHPISR 17 1 F5H5P2;P12694;P12694-2 F5H5P2 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 1 S(1)VDEVNYWDKQDHPISR;S(1)VDEVNYWDKQDHPISR 119.79 4.1132999999999996e-10 14560600.0 1121.16 1004.87 1065.15 1054.55 2501.4 1322.3600000000001 922.29 1692.51 2680.5 1682.83 1943.02 True False 1310.384398269717 1056.0135908532036 1216.204286540514 1312.914797340548 2133.4473735845436 1462.291257488474 1089.8581546848702 1932.4284755944905 2073.371029878919 1302.6775342238063 1460.5145093760698 0.8972073812738168 0.7230421773107419 0.8327231799019067 0.8989399207690334 1.4607505505001452 1.001216522055069 0.7462152191493506 1.3231148771127388 1.419616865541898 0.8919305668386059 1.0 10.512260975250216 -6.549096285604939 20.40741170580388 1.1773567193107801 0.8178017100912084 0.2681971887627649 0.2143884798671727 23.61894377563882 18384.438919867127 0.03244263994641007 0.06754188268879595 2.824253752066094e-07 6.549096285604939 -0.35955500921957173 S(ph)VDFDSLTVR ddPTM_A549_MK2206_60min_R1 2 SVDFDSLTVR 10 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 S(1)VDFDSLTVR;S(1)VDFDSLTVR 223.87 6.001499999999999e-35 62325000.0 2405.3 2955.2 2699.6000000000004 2775.5 3708.0 3304.8 3116.8999999999996 3293.1000000000004 3816.3 4485.1 4259.5 True False 2811.255836060999 3105.6070573202387 3082.4438735809713 3455.497624596931 3162.558111957898 3654.5117424513037 3683.200384192902 3759.9070096957867 2951.914143378819 3471.9127949627673 3201.748593780491 0.8780376577729939 0.9699721781257247 0.9627376364180269 1.0792532653280014 0.9877596629858066 1.1414112118454025 1.150371516160778 1.1743292452753904 0.9219693729585814 1.084380204525452 1.0 11.644644314332078 -3.905112094544802 12.472883277564868 1.0013661617876 0.5683644915157993 0.0 0.09948398248675254 0.0 0.0 0.013816565473048641 0.0 0.0001244193435005706 3.905112094544802 -0.4330016702718007 S(ph)VDFDSLTVR ddPTM_A549_PD325901_60min_R1 2 SVDFDSLTVR 10 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 S(1)VDFDSLTVR;S(1)VDFDSLTVR 181.68 6.258e-14 129518000.0 2110.24 2666.5 2229.3999999999996 2086.21 2523.5 2514.7 2251.4 2759.0 2755.7 2398.4300000000003 2578.1 True False 2324.470011323419 2891.2153130825654 2380.700490471269 2215.0704535733244 2346.2580656023906 2494.2211169461266 2337.0782590133526 2703.969580606372 2639.8875122048867 2246.9927204813766 2261.0100439224157 1.0280670877918403 1.2787273196128157 1.0529367159914131 0.9796818282729098 1.0377035130423773 1.1031446426567548 1.0336434662443927 1.1959122374863524 1.1675700067325627 0.9938004152264969 1.0 11.142751685546255 -11.057772530518506 1.403317546447159 1.0006847783565225 1.105927939168834 0.1704480976047753 0.08346999237854719 0.6106682474862032 2.1679330624269517 0.05923417695899603 0.013537511004557213 8.754421836262804e-12 11.057772530518506 0.10524316081231144 S(ph)VDIHDSIQPR ddPTM_A549_MK2206_60min_R1 1 SVDIHDSIQPR 11 0 Q9Y6D6;E5RHL7;E5RIF2 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 1 S(0.999)VDIHDS(0.001)IQPR 73.46600000000001 0.00045957 1679100.0 194.21 226.98 270.32 268.45 418.78 210.94 240.2 326.65 419.19 394.16 439.46 True False 226.98790002137218 238.5323124900338 308.6554407713765 334.22026205117845 357.17801675451153 233.26153078936034 283.84123080083896 372.9536378236702 324.2441343088766 305.1189822439912 330.32995352101744 0.6871550629965197 0.7221031878807715 0.9343852638290585 1.0117770383481541 1.0812765023193267 0.7061470759857051 0.8592657970473131 1.129033664214592 0.9815765444602539 0.9236794271657771 1.0 8.36776398542574 -5.77763984089453 3.5153779469844064 0.9786298135681215 0.6925440972541035 0.4523761805825186 0.10717039866282199 0.13633153285216426 3.485720999033337 0.01461215257353763 0.058872809082087245 1.668630429111008e-06 5.77763984089453 -0.286085716314018 S(ph)VEAAAELSAK ddPTM_A549_MK2206_60min_R1 2 SVEAAAELSAK 11 0 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 S(1)VEAAAELSAK;S(1)VEAAAELSAK 184.1 1.3040000000000001e-18 3645700.0 1678.87 2325.7 1628.8 1686.5100000000002 3499.8 2702.8999999999996 1802.15 2259.45 4012.6 2651.1000000000004 2830.4 True False 1962.2222115693369 2444.068196132132 1859.7883320820451 2099.7050257103106 2984.9840561570245 2988.919083960189 2129.5773275925553 2579.733956775423 3103.752506805503 2052.2146687310865 2127.5335649339827 0.9222990621208952 1.1487800880866343 0.8741522872941158 0.986919811897522 1.4030255998568222 1.4048751724642872 1.0009606253420664 1.212546772137751 1.458850077837344 0.9645980221208715 1.0 11.054966177363841 -6.729188033722391 24.11457947376271 1.229652072850243 0.9870986412739008 0.27059326979544673 0.1737229105421215 145.7400162479941 108969.80567443372 0.027927343759528333 0.058130798199812456 1.8655717911868214e-07 6.729188033722391 -0.24255343157634213 S(ph)VEAPTERPGER ddPTM_A549_MK2206_60min_R1 1 SVEAPTERPGER 12 1 Q9NWZ8 Q9NWZ8 GEMIN8 Gem-associated protein 8 1 S(1)VEAPTERPGER 82.90799999999999 0.00017009 10198000.0 903.96 1061.7 870.95 1228.0 1348.0 746.45 862.53 703.51 1211.7 1182.6 1321.7 True False 1056.5263482998798 1115.735995112648 994.463806377 1528.860055127014 1149.7109856848024 825.438843546592 1019.2405362308392 803.2346969090167 937.251884687292 915.44983864863 993.4854129357144 1.0634543140174366 1.1230522165551353 1.0009848090656857 1.5388852571164446 1.1572499915096357 0.830851497967594 1.0259240074990323 0.8085017519638125 0.9433977313443844 0.9214527226358643 1.0 9.956354974723448 -7.152113986503237 7.158947648839132 0.9546071178337011 1.1862211693643328 0.43398120821427155 0.14239672335642603 0.21029142330248496 12.27557043426639 0.020358301323265927 0.035396847327724905 7.045081369410788e-08 7.152113986503237 0.23161405153063164 S(ph)VEAPTERPGER ddPTM_A549_PD325901_60min_R1 2 SVEAPTERPGER 12 1 Q9NWZ8 Q9NWZ8 GEMIN8 Gem-associated protein 8 1 S(1)VEAPTERPGER;S(1)VEAPTERPGER 116.96 6.3905999999999994e-06 16730400.0 1633.45 2082.6800000000003 2161.7 1759.51 2283.1 2127.6 2240.3 2125.1 2518.1 2372.9 2382.2 True False 1799.2766415176663 2258.194752766097 2308.405961358098 1868.1909365628583 2122.7429322674134 2110.2735310035314 2325.555842439199 2082.7132133912996 2412.2730139286314 2223.0746890383525 2089.204502009997 0.8612257152359212 1.0808873667434262 1.1049210161749172 0.894211617276095 1.0160532060050365 1.01008471357077 1.1131298253482658 0.9968929376648134 1.1546370935003318 1.064077110163012 1.0 11.028738002340198 -7.627653327895473 7.066514118106891 1.0706276178184846 0.9988864477966944 0.1686800432009704 0.07834403155263393 0.34817099845325533 21.034938918302167 0.01301256071715686 0.019329393217092303 2.3569299337006706e-08 7.627653327895473 -0.07174117002179015 S(ph)VEDDEEGHLICQSGDVLSAR ddPTM_A549_MK2206_60min_R1 2 SVEDDEEGHLICQSGDVLSAR 21 0 F8WBF5;P49759;P49759-3 F8WBF5 CLK1 Dual specificity protein kinase CLK1 1 S(1)VEDDEEGHLICQSGDVLSAR;S(1)VEDDEEGHLICQSGDVLSAR 106.11 2.3598e-10 22766000.0 398.65 161.49 263.37 360.93 535.88 317.31 488.63 457.46999999999997 524.39 533.38 444.15999999999997 True False 465.9323739432573 169.70915122044042 300.71982626500983 449.3578662027633 457.05276187594365 350.88753358666884 577.4077460708328 522.3177734431179 405.61650227875634 412.8890875515021 333.8628138076163 1.3955803242338458 0.5083200170901121 0.9007287239791112 1.345935658655592 1.3689837351557033 1.050993159690024 1.729476066788186 1.5644682541497301 1.21491967809415 1.2367028326473746 1.0 8.38311160236428 -6.241841199391146 21.715165322168787 1.2100365150014625 0.8922203418962611 0.19585986739061623 0.28764566707405126 206.48400250098442 228784.20469747853 0.04196613674945332 0.11072313081486586 5.730055132477557e-07 6.241841199391146 -0.3178161731052014 S(ph)VEDDEEGHLICQSGDVLSAR ddPTM_A549_PD325901_60min_R1 2 SVEDDEEGHLICQSGDVLSAR 21 0 F8WBF5;P49759;P49759-3 F8WBF5 CLK1 Dual specificity protein kinase CLK1 1 S(1)VEDDEEGHLICQSGDVLSAR;S(1)VEDDEEGHLICQSGDVLSAR 106.12 2.3566e-10 24052000.0 561.75 543.54 316.23 618.6400000000001 596.66 457.78999999999996 528.36 455.96 515.01 542.28 739.98 True False 618.7784464615073 589.3460233537962 337.69126944546946 656.8519877666206 554.752659965256 454.06191001979056 548.4670289296859 446.86552010629964 493.3659206955182 508.04034825391614 648.9671511197039 0.9534819218413288 0.9081292055182769 0.5203518681382092 1.0121498239676885 0.8548239444910368 0.6996685567772868 0.8451383525088768 0.6885795672944223 0.7602325015130318 0.7828444742963679 1.0 9.3420016447078 -10.761625111140857 1.0285324256709236 0.9992033735929962 0.800330975332511 0.0 0.14481251066907022 0.5913879630217679 1.118189699540858 0.08412786832589111 0.021764683389945406 1.7313102047074988e-11 10.761625111140857 -0.1988723982604852 S(ph)VEDLTSGPVGLTSIEER ddPTM_A549_PD325901_60min_R1 2 SVEDLTSGPVGLTSIEER 18 0 Q8IY50-2 Q8IY50-2 1 S(1)VEDLTSGPVGLTSIEER;S(1)VEDLTSGPVGLTSIEER 199.49 1.2034e-48 14188900.0 2160.46 1533.1399999999999 1765.69 2294.1000000000004 2059.25 2086.3 2063.16 2195.06 1604.03 1956.63 1981.46 True False 2379.788308753409 1662.3430883552987 1885.520341356516 2435.801346720879 1914.6153840268382 2069.30986451056 2141.674682804471 2151.2778063087435 1536.618197264582 1833.0880478794345 1737.7529815098364 1.3694629409789556 0.9566049410031694 1.0850335815383223 1.40169596751579 1.101776492055468 1.19079632521341 1.232439078276643 1.2379652512174766 0.8842558255486348 1.054861115120497 1.0 10.763007304859041 -8.759593463271546 24.997989793287797 0.9453430223985502 1.189855682460684 0.36390203626801343 0.1254550483917998 31.174300960282434 422172.3479568765 0.020388143268784836 0.0225482338710316 1.7394283203685954e-09 8.759593463271546 0.2445126600621339 S(ph)VEDLVR ddPTM_A549_MK2206_60min_R1 3 SVEDLVR 7 0 Q7L9B9 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 S(1)VEDLVR;S(1)VEDLVR;S(1)VEDLVR 86.13600000000001 0.013288 13513000.0 1075.93 812.97 772.6899999999999 1031.96 2300.5 1347.4299999999998 1293.75 1635.5 2505.5699999999997 1232.38 1379.44 True False 1257.5206800370481 854.3467005243758 882.269060852453 1284.790246326445 1962.099497453922 1490.0141482483534 1528.8076284287486 1867.3371335086867 1938.0623955731103 953.9845020749183 1036.8869773927836 1.212784717577455 0.823953544746604 0.8508825745607183 1.2390841763265323 1.8922983316730944 1.4370072927282223 1.4744207052082787 1.800907113525566 1.86911634327427 0.9200467581082745 1.0 10.01804293094304 -6.521109355073098 24.79363418605549 1.487068748868103 0.96473183433525 0.35271711353557433 0.311067420126521 57.14464221625902 800736.9729129192 0.05123872437461969 0.10795516054123808 3.012247446702734e-07 6.521109355073098 -0.5223369145328529 S(ph)VEDLVR ddPTM_A549_PD325901_60min_R1 2 SVEDLVR 7 0 Q7L9B9 Q7L9B9 EEPD1 Endonuclease/exonuclease/phosphatase family domain-containing protein 1 1 S(1)VEDLVR;S(1)VEDLVR 77.732 0.017093 6808100.0 285.739 464.4 621.39 430.73 539.8299999999999 546.01 412.36 489.65 747.0699999999999 733.46 519.1500000000001 True False 314.747012930066 503.5366178119418 663.5612621216218 457.33521384119433 501.91420311239875 541.5634755890386 428.05258545205044 479.8835466270057 715.6732459059062 687.1492104269332 455.2978411629968 0.6912991551334556 1.105949934938689 1.457422377463166 1.0044748129553907 1.1023865209427015 1.189470774132572 0.9401594884760445 1.0539991698647375 1.57187928692527 1.5092301089583544 1.0 8.830666808475517 S(ph)VEEGKIDGIIDK ddPTM_A549_PD325901_60min_R1 1 SVEEGKIDGIIDK 13 1 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 S(1)VEEGKIDGIIDK 74.428 0.00031999 2157800.0 791.35 1031.2 1042.9 1343.4 1201.7 1201.7 1032.1 1245.0 1144.2 1218.8 1613.8 True False 871.68726943892 1118.1028429967143 1113.6774654671603 1426.3787669172345 1117.2967376399424 1191.9137536223654 1071.3771302867904 1220.1674983163941 1096.1132530626817 1141.844759998291 1415.3128307210704 0.6158972423042436 0.7900040321312326 0.7868772481203088 1.0078187210318204 0.7894344722860348 0.8421556900710861 0.7569896259196262 0.8621185873760121 0.7744671208161352 0.8067790634078732 1.0 10.46690525605708 -10.816267542571444 0.8228016557584196 1.0136285387175856 0.8065084427924653 0.0 0.10482259414604608 0.6065293023610012 0.6475111622400805 0.08352096054653868 0.015986630141347376 1.5266253069509497e-11 10.816267542571444 -0.20712009592512037 S(ph)VEKENVAVESEK ddPTM_A549_MK2206_60min_R1 2 SVEKENVAVESEK 13 1 A0A2R8Y4Z8;Q9Y3X0;M0QYB4 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(1)VEKENVAVESEK;S(1)VEKENVAVESEK 97.32 4.565e-05 14571000.0 8065.4 9630.0 7842.0 8489.7 11101.5 8417.4 8246.2 8043.5 12353.900000000001 11289.2 13097.599999999999 True False 9426.642339902042 10120.125866944341 8954.113519270251 10569.676881117111 9468.48405606812 9308.123680982088 9744.427799458286 9183.69075718564 9555.76137512448 8738.961879310084 9845.104444629496 0.9574954123563691 1.0279348404947466 0.909499088570332 1.0735972320621616 0.9617454146190575 0.9454570780160355 0.989773938332759 0.9328180121233091 0.9706104621710893 0.8876454209764313 1.0 13.265190796116467 S(ph)VEKENVAVESEK ddPTM_A549_PD325901_60min_R1 2 SVEKENVAVESEK 13 1 A0A2R8Y4Z8;Q9Y3X0;M0QYB4 A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(1)VEKENVAVESEK;S(1)VEKENVAVESEK 157.85 5.4675e-19 35093000.0 9077.4 10945.400000000001 10084.2 10691.4 12670.8 11539.7 10868.900000000001 12228.8 12028.8 12901.0 12471.4 True False 9998.930965571313 11867.80727088464 10768.574453220774 11351.783496068872 11780.84671988697 11445.724509175345 11282.521937190288 11984.886990691979 11523.271367278789 12086.42865830157 10937.496862718279 0.9141882362182726 1.0850569760012851 0.9845556609873602 1.0378776459139145 1.0771062947723757 1.0464665410044065 1.0315451587143367 1.0957614105969575 1.0535565414932542 1.10504522286992 1.0 13.41699498267577 -5.246340055009938 24.45302190325317 1.036131866993016 0.9141881176135314 0.4681324186423239 0.03905407954315735 1333.5638357120317 2159630.079573338 0.0048382889975201035 0.15254131469636648 5.671003887409102e-06 5.246340055009938 -0.1219437493794846 S(ph)VELDLNQAHMEETPK ddPTM_A549_MK2206_60min_R1 5 SVELDLNQAHMEETPK 16 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK 189.51 6.865899999999999e-35 72156300.0 9848.5 11607.4 9692.699999999999 10600.400000000001 16062.8 12483.800000000001 12357.500000000002 12879.599999999999 17424.699999999997 13711.3 14851.699999999999 True False 11510.686027292533 12198.167080786052 11067.270608037592 13197.498475870041 13699.983398262497 13804.827429924237 14602.697791929091 14705.32274212075 13478.033271528144 10613.907807088575 11163.613003932312 1.031089668124286 1.0926719760430001 0.9913699627655684 1.1821888192667827 1.2271997778350758 1.2365913638408617 1.3080619855583835 1.3172547934921153 1.2073182102228546 0.9507592034361898 1.0 13.446516397691573 -6.269415207405279 24.50773047554565 1.1541915348958913 1.0438066798143317 0.21810013884792612 0.11137604902469422 712.0307837869931 2187895.578400234 0.018006221751710964 0.04260272610372916 5.37755415404766e-07 6.269415207405279 -0.1103848550815596 S(ph)VELDLNQAHMEETPK ddPTM_A549_PD325901_60min_R1 4 SVELDLNQAHMEETPK 16 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK 207.07 6.572799999999999e-41 99415600.0 10310.5 11017.18 11845.41 11110.66 12459.98 12040.599999999999 12016.97 13634.990000000002 13095.42 11569.23 12839.17 True False 11357.214369811074 11945.636423396578 12649.31075483686 11796.940234060332 11584.833989397464 11942.545345648201 12474.282369288301 13363.02942800728 12545.06503794975 10838.746843382862 11260.033484204401 1.0086306036072628 1.0608881794316103 1.1233812734732398 1.0476825180501554 1.0288454297803549 1.0606136617978295 1.107837058103535 1.1867664023160291 1.1141232444422118 0.9625856671374449 1.0 13.458923497147326 -5.28365069814263 4.776951613332191 1.0698055628808694 1.0061408106426861 0.0808460328991859 0.05924171814318479 0.3504135648059505 21.179884393580295 0.00832484662337856 0.06970477694261915 5.204143961196648e-06 5.28365069814263 -0.06366475223818324 S(ph)VELDLNQAHMEETPKR ddPTM_A549_MK2206_60min_R1 3 SVELDLNQAHMEETPKR 17 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)VELDLNQAHMEETPKR;S(1)VELDLNQAHMEETPKR;S(1)VELDLNQAHMEETPKR 90.464 1.3169e-06 13789200.0 2791.3900000000003 3399.51 3194.0699999999997 3332.7000000000003 4143.900000000001 3602.98 2434.11 2927.57 4971.4 4496.9 4477.599999999999 True False 3262.508389066774 3572.5305385187903 3647.037154870637 4149.211649610589 3534.3377993911367 3984.2449521354397 2876.356279369817 3342.5620128071077 3845.385837694481 3481.04716676731 3365.6883445267117 0.9693435800056386 1.0614561340263264 1.0835932449899752 1.2327973433303903 1.050108458538261 1.18378309109179 0.854611593508755 0.9931287958502717 1.1425258205941302 1.0342749566899725 1.0 11.716685877069036 S(ph)VELDLNQAHMEETPKR ddPTM_A549_PD325901_60min_R1 2 SVELDLNQAHMEETPKR 17 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)VELDLNQAHMEETPKR;S(1)VELDLNQAHMEETPKR 123.43 1.0869e-10 13073000.0 1518.11 1528.6999999999998 1497.97 1777.63 1989.4499999999998 1653.6 1160.94 1541.44 1739.3000000000002 2040.79 2055.92 True False 1672.2274096264848 1657.5289139731162 1599.6312522253738 1887.4301678093527 1849.71789522991 1640.1336298493334 1205.120206990744 1510.6947699637124 1666.2032695786766 1911.9341711165991 1803.0548735506668 0.9274412188761899 0.9192892231333074 0.8871783525230705 1.04679574398783 1.0258799786760522 0.9096415499654202 0.6683768889504513 0.8378529084856834 0.9241001447157872 1.060386014404277 1.0 10.816227588584177 -10.024893128282725 1.1573894836840495 0.9889296969782455 0.905919949228202 0.17641131635376373 0.09636500789511646 0.7543889065209749 2.0313734314575993 0.03369647441292092 0.018947956900511136 9.442932205276072e-11 10.024893128282725 -0.08300974775004355 S(ph)VENLPECGITHEQR ddPTM_A549_MK2206_60min_R1 3 SVENLPECGITHEQR 15 0 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR 185.13 7.734299999999998e-34 277609000.0 5960.299999999999 6358.6 5779.950000000001 5403.2 8780.7 6774.4 7631.5 6214.6 10941.6 8888.599999999999 9892.8 True False 6966.252924655704 6682.225580223492 6599.633822456783 6726.984242558869 7489.070661722959 7491.26251151722 9018.044766263964 7095.538581414301 8463.345070144818 6880.659086599196 7436.144732609845 0.9368097549401484 0.8986142444107927 0.8875074463673767 0.9046333126168076 1.0071173882456883 1.0074121444497532 1.2127312055556136 0.9541958684986485 1.1381361410342614 0.9252992422841544 1.0 12.860339134933795 -6.9870879109312485 2.0397309094460763 1.0666426647659961 0.9033540208788066 0.36081397069456556 0.0787269382932932 0.1991146455387534 1.6565996045036242 0.010753325543083362 0.022160534907740254 1.0301775683189143e-07 6.9870879109312485 -0.16328864388718956 S(ph)VENLPECGITHEQR ddPTM_A549_PD325901_60min_R1 3 SVENLPECGITHEQR 15 0 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(1)VENLPECGITHEQR;S(0.997)VENLPECGIT(0.003)HEQR;S(1)VENLPECGITHEQR 180.14 2.4078e-28 432842000.0 10739.1 11791.9 12004.3 11213.7 12703.1 10833.6 11913.900000000001 12010.900000000001 11508.900000000001 12987.5 14354.8 True False 11829.325526292421 12785.644796676646 12818.983985720046 11906.34478083951 11810.87807931592 10745.374753468635 12367.289984036232 11771.33317713123 11025.22095627784 12167.46703353939 12589.250602574568 0.939636988707911 1.0156001497072364 1.0182483763647137 0.9457548472666515 0.9381716554995365 0.8535356942748562 0.9823690364466219 0.9350304913879409 0.8757646745091503 0.9664965308618988 1.0 13.619904786186408 -6.392659130928238 5.571260585572978 0.9360282572858128 0.9932886460245737 0.22887194972793434 0.044342386548832144 0.3020642022959487 12.444274171593587 0.007564671601856275 0.01781891175270477 4.048935598902415e-07 6.392659130928238 0.057260388738760826 S(ph)VENQESVEIINDLK ddPTM_A549_PD325901_60min_R1 2 SVENQESVEIINDLK 15 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 S(1)VENQESVEIINDLK;S(1)VENQESVEIINDLK 161.14 1.0561e-19 3505900.0 1761.63 1853.08 2657.7 2219.67 2743.8999999999996 2413.6 2272.2 1985.98 2645.7 2406.9 2340.64 True False 1940.469380756536 2009.2455549848266 2838.067504048395 2356.773974663675 2551.1779299411132 2393.9444418265284 2358.66981439555 1946.36807092883 2534.510429669582 2254.9279232358763 2052.756118539452 0.945299523519234 0.9788038319985214 1.382564386687931 1.1481022774105933 1.2428061506674701 1.1662098678969395 1.1490258356037724 0.9481730700253288 1.234686579072482 1.098487980559654 1.0 11.003346520255821 -11.072008613449077 1.367999015110307 0.9994775376569044 1.1476164361994508 0.03012005516400995 0.1313669141069578 0.6919466617362501 2.29772427009252 0.09450024204376684 0.020534515533673643 8.472106110769478e-12 11.072008613449077 0.14813889854254636 S(ph)VEPQDAGPLER ddPTM_A549_MK2206_60min_R1 2 SVEPQDAGPLER 12 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 S(1)VEPQDAGPLER;S(1)VEPQDAGPLER 175.6 5.9196e-16 37044000.0 2313.5299999999997 3039.99 2809.9 2696.8 3755.8 2954.6 2624.98 2864.15 3939.8999999999996 4047.2999999999997 4376.5 True False 2703.9973036220863 3194.7125061528686 3208.386072149643 3357.516121063953 3203.3267952781753 3267.2538108952513 3101.904887708518 3270.152033591504 3047.5189407274606 3133.012119028073 3289.6942647447645 0.8219600625506394 0.9711274814775941 0.9752839668213271 1.0206164618536218 0.973746049779708 0.9931785594515561 0.9429158572427956 0.9940595600744141 0.9263836379530263 0.9523718214802408 1.0 11.683737794691773 -5.2614509107141245 9.310000360275207 0.9716968648154123 0.8214090093677532 0.7403230752504597 0.02598584742970407 0.036154266917454624 72.33048294192061 0.004214044580439601 0.033927438318066445 5.477080061357813e-06 5.2614509107141245 -0.1502878554476591 S(ph)VEPQDAGPLER ddPTM_A549_PD325901_60min_R1 2 SVEPQDAGPLER 12 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 S(1)VEPQDAGPLER;S(1)VEPQDAGPLER 115.12 2.7059e-05 44655000.0 1252.04 1572.6 1328.58 1572.76 1851.79 1621.15 1523.19 1307.85 1968.96 1436.56 1434.76 True False 1379.1461790968674 1705.12852104018 1418.7454282005563 1669.9058132028808 1721.7266587286908 1607.94789189057 1581.1558289715495 1281.7639057615231 1886.21145844284 1345.8553564351369 1258.2936156930007 1.096044803769673 1.3551117956686816 1.1275153990344196 1.3271193562268742 1.3683027850224418 1.277879718880238 1.2565873411832686 1.018652474888062 1.499023308168035 1.0695876857754794 1.0 10.297252890884288 -11.137903147930563 1.5130959837909748 1.0003073608935562 1.2902043606101121 0.26655781146002466 0.13409848515416478 0.3548069993171214 1.457738621386855 0.10203922796779054 0.021983128614459575 7.279421249054694e-12 11.137903147930563 0.2898969997165559 S(ph)VEYEGDLK ddPTM_A549_MK2206_60min_R1 2 SVEYEGDLK 9 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(1)VEYEGDLK;S(1)VEYEGDLK 79.65899999999999 0.0017352999999999997 8099800.0 2534.4 2786.7 2980.1 2625.8 4387.2 3279.0 3398.1 3501.1 5172.2 3483.2 4504.700000000001 True False 2962.144759869036 2928.5311270419293 3402.7229914278587 3269.1211178766425 3741.8486916886955 3625.98160357596 4015.490784281146 3997.391646669069 4000.704958306193 2696.342700812536 3386.0586666047625 0.8748060950873041 0.8648790276213374 1.0049214518896112 0.9654649962561415 1.105074973624331 1.0708561075262677 1.185889312516703 1.1805441193602522 1.1815226350811407 0.7963071424028775 1.0 11.725391254140927 -6.207013017590293 1.0774583995348472 1.103413410157891 0.8572788006255113 0.28821112300003193 0.11029016071111461 0.3707369609007329 0.7154667631210156 0.012460633711951325 0.0702846361836594 6.208504245126429e-07 6.207013017590293 -0.24613460953237964 S(ph)VFLRPQR ddPTM_A549_MK2206_60min_R1 1 SVFLRPQR 8 1 Q9Y2L9-2;Q9Y2L9 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 S(1)VFLRPQR 47.187 0.010618 2805600.0 334.87 312.67 388.02 380.48 563.93 446.32 521.9 349.07 483.26 607.92 733.27 True False 391.3878692145456 328.5835674784512 443.0470706130125 473.6976170803963 480.97664403355395 493.54928615676147 616.7224744169769 398.55174148204054 373.8023816076427 470.59044978122336 551.1788217775373 0.7100923579616683 0.5961469390619504 0.8038172968696389 0.8594263755503774 0.8726326648081594 0.8954431241844124 1.1189154046740457 0.7230897228538672 0.6781871270056055 0.8537890629824663 1.0 9.106376645481108 -5.91019450301471 4.581825469915934 0.8604043811421657 0.6548252568829067 0.3453759306288894 0.11548389915340031 0.22449697457182582 8.340536944546383 0.019862704301425862 0.06577292976220274 1.229717906322055e-06 5.91019450301471 -0.20557912425925895 S(ph)VFLRPQR ddPTM_A549_PD325901_60min_R1 2 SVFLRPQR 8 1 Q9Y2L9-2;Q9Y2L9 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 S(1)VFLRPQR;S(1)VFLRPQR 66.435 0.0023649 6740800.0 994.46 1125.6399999999999 1067.42 1122.32 1257.39 1287.37 1180.51 1039.17 1392.6 1035.06 1045.84 True False 1095.4168471172409 1220.501633233924 1139.8615401178988 1191.643157426345 1169.0752641600122 1276.8860855461633 1225.4349540498586 1018.4429391369057 1334.0738648969507 969.7061349555548 917.2083101259909 1.194294507609477 1.330670055820004 1.2427509950943678 1.299206673413869 1.2746016921711318 1.3921440434515533 1.3360486822034228 1.1103725597481873 1.4544938703332264 1.0572365342201846 1.0 9.841105615913715 -11.001286671472165 1.2544703642274622 0.9984741277559859 1.3080462395185144 0.5546608478981456 0.09020007043135511 0.25434942197207683 0.7066245284620412 0.06774148459512523 0.015109814700410073 9.970417138261187e-12 11.001286671472165 0.3095721117625285 S(ph)VGDGETVEFDVVEGEK ddPTM_A549_MK2206_60min_R1 3 SVGDGETVEFDVVEGEK 17 0 P67809;H0Y449;Q9Y2T7;A0A0D9SEI8;P16989-2;P16989;P16989-3 P67809;P16989-2 YBX1;YBX2;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 1 S(0.999)VGDGET(0.001)VEFDVVEGEK;S(0.999)VGDGET(0.001)VEFDVVEGEK;S(0.992)VGDGET(0.008)VEFDVVEGEK 409.01 0.0 73313200.0 10405.94 10052.57 9174.050000000001 7165.61 12631.14 8770.88 8190.7699999999995 8909.26 13233.490000000002 9905.660000000002 10287.880000000001 True False 12162.208271193022 10564.202875001933 10475.068239155993 8921.184771676453 10773.11603836998 9699.008699961054 9678.926885955827 10172.174888464446 10236.125644541084 7667.9645262203485 7733.115464956557 1.572743653745683 1.366099203209205 1.3545728479840873 1.1536339800050524 1.3931145974981898 1.2542174940893038 1.251620634635151 1.315404500884637 1.3236742281848999 0.9915750722937674 1.0 12.916834039087899 -14.08187118167953 0.19697967473697697 7.363986702550836e-13 1.392530435896421 0.6769767565239153 0.09270882284624607 15.852265008287873 0.25452265625847675 6.286177446956237 0.08853141545119228 8.28187780321797e-15 14.08187118167953 1.3925304358956847 S(ph)VGDGETVEFDVVEGEK ddPTM_A549_PD325901_60min_R1 4 SVGDGETVEFDVVEGEK 17 0 P67809;H0Y449;Q9Y2T7;A0A0D9SEI8;P16989-2;P16989;P16989-3 P67809;P16989-2 YBX1;YBX2;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 2;Y-box-binding protein 3 1 S(1)VGDGETVEFDVVEGEK;S(0.939)VGDGET(0.061)VEFDVVEGEK;S(1)VGDGETVEFDVVEGEK;S(1)VGDGETVEFDVVEGEK 310.2 6.209599999999998e-152 64065100.0 12460.5 13566.2 16048.57 14764.2 15271.4 12992.34 16794.309999999998 18129.590000000004 22693.01 32298.730000000003 31684.239999999998 True False 13725.480787064716 14709.471284583042 17137.722468091204 15676.151102068969 14198.789547469934 12886.534690636596 17433.426657249067 17767.981105061786 21739.30170676802 30259.382675664252 27787.27934294571 0.4939483501665366 0.5293598953334487 0.6167470466100855 0.5641484691105118 0.5109816391965177 0.46375661796872064 0.6273887573550755 0.6394285991720345 0.7823472546004013 1.0889652888362433 1.0 14.762136966495753 -9.1223860766048 0.6229930718261375 0.9733096260404921 0.5257483799487789 0.9047491850352651 0.061174975418824676 0.12474366517955675 0.10822039529740639 0.019769544457894105 0.015263047484837946 7.544212684069506e-10 9.1223860766048 -0.4475612460917132 down S(ph)VGGSGGGSFGDNLVTR ddPTM_A549_MK2206_60min_R1 1 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.676)VGGS(0.311)GGGS(0.013)FGDNLVTR 289.95 1.3927999999999998e-132 61580000.0 9853.0 10270.0 8952.9 7999.7 11858.0 9372.3 7831.8 8841.5 12746.0 11948.0 11580.0 True False 11515.945517278094 10792.699133283311 10222.555843748361 9959.626859120184 10113.70390819761 10364.070565170769 9254.736683538764 10094.809700958152 9859.051351179525 9248.93850175362 8704.366408258737 1.3230078993861887 1.2399178328526195 1.1744169953655859 1.144210433245371 1.1619115549411718 1.1906748956865256 1.0632292173222204 1.1597408964057576 1.1326558291279212 1.0625630939637596 1.0 13.087523572437345 -2.0000000015757595 0.04500285324409585 0.6308120220039306 2.09438272623483 0.7283253226426314 0.0440349871309665 163.89242068777085 0.5439887465532682 4.437515504997781 17.20428150359141 0.009999999963716796 2.0000000015757595 1.4635707042308994 S(ph)VGGSGGGSFGDNLVTR ddPTM_A549_PD325901_60min_R1 1 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.744)VGGS(0.097)GGGS(0.159)FGDNLVTR 324.45 8.579999999999998e-173 82169000.0 11266.0 10606.0 11249.0 11826.0 13784.0 11058.0 13398.0 12540.0 14353.0 12155.0 13970.0 True False 12409.716026409144 11499.804841760233 12012.42478573218 12556.465161205317 12815.859392218492 10967.94731426822 13907.868221666908 12289.879862560309 13749.793323902013 11387.531225614726 12251.778563126385 1.0128909825189052 0.9386233013034261 0.9804637525759259 1.0248687646866173 1.0460407300201944 0.8952126630233056 1.1351713671617263 1.0031098586411442 1.1222691671300797 0.9294594386391586 1.0 13.5807035767731 -7.768487846340239 24.999997556108884 1.0595181412381245 0.9856498687882094 0.10604627212384543 0.06718037969107414 173.23453269350892 614440.5233161448 0.009439243206666673 0.013193045275294687 1.704167009482154e-08 7.768487846340239 -0.07386827244991512 S(ph)VHEEF ddPTM_A549_MK2206_60min_R1 1 SVHEEF 6 0 A0A5F9UP49;Q9BRK5-5;Q9BRK5-2;Q9BRK5 A0A5F9UP49 SDF4 45 kDa calcium-binding protein 1 S(1)VHEEF 67.98100000000001 0.054007000000000006 17872000.0 443.42 405.02 363.1 314.49 419.14 523.09 291.97 522.11 723.1 637.27 456.83 True False 518.258455421847 425.63378801970873 414.59303989378105 391.5400641179925 357.4850612314008 578.4430366009603 345.0171696791048 596.1206913948151 559.3190045534218 493.3102643967633 343.38650313340565 1.5092569180580273 1.2395181060868603 1.2073655665281395 1.1402313735257066 1.041057403157508 1.6845246721192044 1.004748778798291 1.7360050146269792 1.628832232628917 1.4366035353611795 1.0 8.423689524848113 S(ph)VHEEF ddPTM_A549_PD325901_60min_R1 1 SVHEEF 6 0 A0A5F9UP49;Q9BRK5-5;Q9BRK5-2;Q9BRK5 A0A5F9UP49 SDF4 45 kDa calcium-binding protein 1 S(1)VHEEF 66.682 0.055698000000000004 17627000.0 154.07 171.28 131.87 117.78 270.91 101.51 144.2 182.87 272.61 208.26 242.1 True False 169.71107297966066 185.71436670721224 140.81949119872903 125.05500310221228 251.88221618876324 100.68333621553323 149.68760990926768 179.22251439126026 261.15314972681136 195.110428058126 212.32323479834625 0.7993052344970326 0.874677549461764 0.6632316587135278 0.5889840705421766 1.1863148959085335 0.47419839053958046 0.7049987254170902 0.8441022225451522 1.2299791399412376 0.9189311204844439 1.0 7.730118445587848 -8.620286000918483 5.390810023561063 1.107906869256441 0.7574701505575314 0.30767208141363744 0.18653349069831981 0.14160029986174513 6.481115175092702 0.030415721053174843 0.034507708537855876 2.3972537081521173e-09 8.620286000918483 -0.3504367186989097 S(ph)VHREESCSDSGTK ddPTM_A549_MK2206_60min_R1 2 SVHREESCSDSGTK 14 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(1)VHREESCSDSGTK;S(1)VHREESCSDSGTK 106.67 5.2537999999999996e-06 42006000.0 8066.5 9257.8 8194.4 7528.6 4269.5 4019.1000000000004 2721.6000000000004 4055.0 6240.5 12543.1 12890.3 True False 9427.927993009625 9728.98247673907 9356.489138269344 9373.107337971702 3641.462205772449 4444.398494337338 3216.079491038982 4629.808667916675 4827.036714030742 9709.604998438717 9689.282755818447 0.9730264076923674 1.0040972816999052 0.9656534311222098 0.9673685425624635 0.3758237113666374 0.45869220729144905 0.3319213167876348 0.4778278005290391 0.49818307873532636 1.0020973939075177 1.0 13.242174159495235 -6.643604507595747 11.570457022312073 0.6571249934437223 0.9803732306192433 0.4018282287972398 0.21723261680510764 0.438222598579313 42.267272193424134 0.038210924201970205 0.07955852805593394 2.2719328569428434e-07 6.643604507595747 0.323248237175521 S(ph)VHREESCSDSGTK ddPTM_A549_PD325901_60min_R1 2 SVHREESCSDSGTK 14 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(1)VHREESCSDSGTK;S(1)VHREESCSDSGTK 104.84 6.2928e-06 55129000.0 8784.0 9989.3 9472.9 10646.900000000001 10937.1 10598.599999999999 9060.1 11926.0 9073.9 11444.6 12202.099999999999 True False 9675.745213560975 10831.133368451401 10115.78795917525 11304.534832135716 10168.91582694667 10512.288515554625 9404.887063376951 11688.126574233993 8692.555538337241 10721.986002852342 10701.31905548493 0.9041637917151624 1.0121306833572012 0.9452842127896778 1.0563683573513873 0.9502488220584939 0.9823357719781827 0.8788530661139856 1.0922136340046116 0.8122882322513221 1.0019312523306947 1.0 13.385501015196377 -8.770636512130162 24.999171882886536 0.9113583496419986 0.9763338696361441 0.019644145250163003 0.07590803422306476 323.77084921593126 880054.2029083229 0.014369475518819053 0.015399873477429979 1.6957564899904786e-09 8.770636512130162 0.06497551999414553 S(ph)VHS(ph)EHSAR ddPTM_A549_PD325901_60min_R1 2 SVHSEHSAR 9 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 2 S(1)VHS(0.998)EHS(0.003)AR;S(1)VHS(0.998)EHS(0.002)AR 54.343 0.006967 11860800.0 770.6500000000001 733.05 320.9 523.4 771.6800000000001 544.02 184.32 200.36 687.9200000000001 897.06 812.6600000000001 True False 848.8858206774552 794.826696139199 342.67820372846086 555.7292292723541 717.4798589514779 539.5896814892559 191.33439846377414 196.36366262062074 659.0091147062403 840.4194785067821 712.707971876184 1.1910710335437762 1.1152207180268234 0.48081152063778654 0.7797432485698347 1.0066954310371077 0.7570978616512468 0.26846114539745025 0.2755177020171373 0.9246551753468072 1.179191915441048 1.0 9.477167251256722 -5.551536923157831 24.793080285146313 0.8231019009421788 1.172108883417624 0.19064740033303518 0.2912896533853888 228.66669625988197 197826.28201888356 0.04257158667412987 0.16488473574320198 2.8084265938037024e-06 5.551536923157831 0.34900698247544526 S(ph)VIDPVPAPVGDSHVDGAAK ddPTM_A549_MK2206_60min_R1 4 SVIDPVPAPVGDSHVDGAAK 20 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 S(1)VIDPVPAPVGDSHVDGAAK;S(1)VIDPVPAPVGDSHVDGAAK;S(1)VIDPVPAPVGDSHVDGAAK;S(1)VIDPVPAPVGDSHVDGAAK 176.1 3.4709e-35 97079800.0 6305.380000000001 6521.900000000001 6923.1 6672.469999999999 10078.04 7472.33 7216.69 7279.030000000001 11725.1 9758.4 10433.2 True False 7369.57399225972 6853.836852712806 7904.899681874509 8307.225449538559 8595.573666298857 8263.04700086878 8527.86915865157 8310.854793594455 9069.383571137218 7553.970662496859 7842.348498328584 0.9397151878458825 0.8739520889913963 1.0079760780280622 1.0592777726352065 1.0960458679094414 1.0536444539068697 1.0874126749747335 1.0597405605432764 1.1564627066841198 0.9632281279143377 1.0 12.937070038431795 -5.987769891199608 2.861581189950066 1.0745882946546346 0.9066540386384271 0.5489320813798861 0.0513093870579453 0.1386403591151612 2.2818502913678325 0.007855922983304557 0.027888631693801055 1.0285611318441155e-06 5.987769891199608 -0.16793425601620748 S(ph)VIDPVPAPVGDSHVDGAAK ddPTM_A549_PD325901_60min_R1 2 SVIDPVPAPVGDSHVDGAAK 20 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 S(1)VIDPVPAPVGDSHVDGAAK;S(1)VIDPVPAPVGDSHVDGAAK 146.5 1.5660999999999998e-21 150647000.0 3593.8 3938.0 4147.200000000001 4302.9 4630.1 4110.3 4966.6 4675.5 4814.1 4511.4 5046.8 True False 3958.639930384269 4269.8690804122 4428.653931139524 4568.680360405068 4304.897748977862 4076.8270795656226 5155.606680827802 4582.243484641205 4611.780118483705 4226.549434079657 4426.075594301094 0.8943904924446652 0.9647076714889322 1.000582533394086 1.0322192341874117 0.9726218310687559 0.9210929620847066 1.1648257177229495 1.0352836021466036 1.0419569255486103 0.9549202999428338 1.0 12.111812376242035 S(ph)VIEPLPVTPTR ddPTM_A549_MK2206_60min_R1 4 SVIEPLPVTPTR 12 0 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 S(1)VIEPLPVTPTR;S(1)VIEPLPVTPTR;S(1)VIEPLPVTPTR;S(1)VIEPLPVTPTR 150.69 2.9983e-12 15380900.0 4464.38 4281.530000000001 4233.15 3671.53 5801.08 4420.27 3709.79 4493.07 6454.0 6163.889999999999 6026.700000000001 True False 5217.858200388311 4499.441589106767 4833.4743233995005 4571.055014821245 4947.748816644208 4888.020037462244 4383.810822700437 5129.976431949788 4992.1793049201815 4771.462967992473 4530.1040615417005 1.1518186181825925 0.9932313977740066 1.0669676143718774 1.0090397378786942 1.0921931923480745 1.0790083342586032 0.967706428626393 1.1324191149383744 1.102001021853177 1.0532788878957082 1.0 12.145328475628041 -11.02266342771458 1.3491987034723125 1.0004493948185083 1.0668704169376562 0.040221671752017185 0.056115446985545096 0.5992898385476096 1.9646669920980155 0.03549747133994081 0.008248660349728985 9.49153759527806e-12 11.02266342771458 0.06642102211914791 S(ph)VIEPLPVTPTR ddPTM_A549_PD325901_60min_R1 2 SVIEPLPVTPTR 12 0 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 S(1)VIEPLPVTPTR;S(1)VIEPLPVTPTR 159.65 6.2661e-14 26138000.0 5079.3 6242.8 6077.2 5998.6 7786.1 7485.700000000001 6307.799999999999 7347.799999999999 7757.6 7194.8 7594.5 True False 5594.9467968169665 6768.902665108502 6489.635337172338 6369.119898190953 7239.231196586798 7424.738941075924 6547.846780760598 7201.242364762406 7431.575049780684 6740.519100127753 6660.424645502025 0.8400285409122366 1.0162869524662719 0.9743575946850438 0.9562633371270406 1.086902349608543 1.1147545894224722 0.9830974944191504 1.0811986844751125 1.1157809667285161 1.0120254276399356 1.0 12.701398446107241 -3.9422427609333512 0.6172046968480721 1.0564147761005105 1.237107810663805e-10 0.5338014538185256 0.05313140296018372 8.753802070214322 0.6605038115261334 0.009885973858089704 9.548631446011589 0.00011422396697959918 3.9422427609333512 -1.0564147759767997 S(ph)VILDGR ddPTM_A549_MK2206_60min_R1 2 SVILDGR 7 0 Q2M1Z3 Q2M1Z3 ARHGAP31 Rho GTPase-activating protein 31 1 S(1)VILDGR;S(1)VILDGR 97.635 0.011616 4217700.0 845.88 804.98 728.63 733.77 1487.31 815.5899999999999 808.12 699.0 1382.05 1255.63 1137.6100000000001 True False 988.6438642195475 845.9500436524254 831.9606903271974 913.5436829401873 1268.5286692276427 901.8951924551741 954.944943525287 798.0853905977202 1069.0178816803427 971.9823109270924 855.1100405612456 1.1561598125671146 0.9892879319919947 0.9729282207716164 1.0683346465451267 1.483468336303305 1.0547124342771386 1.1167509422512634 0.9333130857332729 1.2501524142772318 1.1366751234602959 1.0 9.739966276155492 -6.531627396747837 24.99515933328132 1.1282232631070601 1.0321398136123219 0.08814016959569637 0.14200739707143303 414.2053484503644 1183395.619628924 0.02167563809695775 0.045176555402063764 2.9401710920002056e-07 6.531627396747837 -0.09608344949473824 S(ph)VILDGR ddPTM_A549_PD325901_60min_R1 1 SVILDGR 7 0 Q2M1Z3 Q2M1Z3 ARHGAP31 Rho GTPase-activating protein 31 1 S(1)VILDGR 83.647 0.014415 2956200.0 743.61 617.42 944.97 751.25 736.84 848.17 872.07 1043.4 745.09 884.73 1019.6 True False 819.1007397832515 669.4521502356783 1009.1013467662322 797.6530062874593 685.0869003600029 841.262784729867 905.2571010650144 1022.5885684685348 713.7764584202705 828.8679968110335 894.1956637769265 0.9160195838162677 0.7486640534668098 1.12850172243507 0.8920340800114286 0.7661487615208459 0.9408039188833904 1.0123702649612125 1.1435847990464403 0.7982329677214082 0.9269425366144584 1.0 9.804446739611114 S(ph)VIS(ph)LLEK ddPTM_A549_PD325901_60min_R1 1 SVISLLEK 8 0 Q5EBM4-2;Q5EBM4 Q5EBM4-2 ZNF542P Putative zinc finger protein 542 2 S(1)VIS(1)LLEK 47.302 0.040855 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)VKEDSNLTLQEK ddPTM_A549_MK2206_60min_R1 2 SVKEDSNLTLQEK 13 1 P46940;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(1)VKEDSNLTLQEK;S(0.995)VKEDS(0.002)NLT(0.003)LQEK 190.23 4.1355999999999997e-26 30669000.0 9621.0 11403.1 10502.8 9566.9 12691.900000000001 9694.9 8197.6 9743.9 12803.099999999999 12563.7 11899.599999999999 True False 11244.78958913353 11983.469083421913 11992.254969419999 11910.790929474464 10824.938322858265 10720.807883046224 9686.997808546874 11125.127664442247 9903.218292349484 9725.551444131399 8944.600907747465 1.257159453519467 1.3397432939732727 1.340725549759607 1.3316179282138572 1.2102203814909311 1.198578672611349 1.0829994438495711 1.2437813357112553 1.10717273967715 1.0873097128019995 1.0 13.126801397877417 -8.022389182722323 0.2916082959083933 0.9846742121784092 1.3782001756570434 0.7202988052334125 0.059011000510097625 0.5173700237084536 0.11892500104035732 0.042344862994856486 0.07266074046292073 9.49753313240624e-09 8.022389182722323 0.3935259634786342 S(ph)VKEDSNLTLQEK ddPTM_A549_PD325901_60min_R1 2 SVKEDSNLTLQEK 13 1 P46940;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(1)VKEDSNLTLQEK;S(1)VKEDSNLTLQEK 180.76 4.176000000000001e-24 58907000.0 11592.4 12263.5 13487.1 12783.4 15801.099999999999 12429.3 14524.900000000001 16093.2 13924.2 15127.7 14575.5 True False 12769.25191412617 13296.988183756997 14402.415710520798 13573.001584792164 14691.285246835714 12328.079901721287 15077.653017830255 15772.208501128842 13339.014296709842 14172.534440290574 12782.805901707125 0.9989396703912131 1.0402245239428383 1.1267022139949239 1.0618170759347532 1.1493005025503606 0.96442674609296 1.1795260863514057 1.2338612212693056 1.0435122303569075 1.1087185825451558 1.0 13.641916930713773 -8.984157158118045 20.94154602151371 1.019195932033043 1.0957425809748813 0.02452599781325704 0.07928889627970978 20.48265942208037 27076.930107338892 0.013303650283338254 0.013470693009455305 1.0371530333964887e-09 8.984157158118045 0.07654664894183827 S(ph)VKTSPTTQSK ddPTM_A549_MK2206_60min_R1 1 SVKTSPTTQSK 11 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.774)VKT(0.115)S(0.094)PT(0.013)T(0.003)QS(0.001)K 40.552 0.027544 51894000.0 1613.9 1901.0 2008.6 1639.7 2669.9 1393.0 1622.8 1393.4 2756.1 2356.5 2484.5 True False 1886.2868639333326 1997.7527801725012 2293.4496830918424 2041.4265736089312 2277.1612467951422 1540.4063354014368 1917.641754136559 1590.9187171085325 2131.847750587311 1824.1650133396706 1867.530081288327 1.0100436308003489 1.0697299069979849 1.228065724922456 1.093115765075463 1.2193438111712924 0.824836157037309 1.0268331275358424 0.8518838507870393 1.141533286101953 0.9767794541125995 1.0 10.866915766110855 S(ph)VLADQGK ddPTM_A549_MK2206_60min_R1 1 SVLADQGK 8 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09 Q9NYF8-2 BCLAF1 Bcl-2-associated transcription factor 1 1 S(1)VLADQGK 87.94200000000001 0.0026979 5077000.0 4350.4 4212.0 4324.7 4182.1 6148.6 3515.2 4295.6 4416.6 6371.5 6898.8 6400.0 True False 5084.6411629317645 4426.372809093411 4938.00749002653 5206.714687741603 5244.149085001167 3887.1761307990882 5076.054916852975 5042.666575270232 4928.365423194751 5340.356288575311 4810.703368985831 1.0569433974482787 0.9201092791606807 1.0264626835779187 1.0823187979763669 1.0901002790589254 0.8080265675616919 1.0551585760988387 1.048218147845042 1.024458388968124 1.1100988522809585 1.0 12.23203212933547 -11.215207463429158 1.6886500934182065 1.0000286234764983 1.012931325692974 0.0 0.08455277487868644 3.8965174428445994 20.093761838523946 0.05439011762726441 0.01140545887633325 6.092457896606923e-12 11.215207463429158 0.012902702216475603 S(ph)VNDLLDETSTFKPGHAR ddPTM_A549_PD325901_60min_R1 2 SVNDLLDETSTFKPGHAR 18 1 C9J119;Q6ZWE6-3;Q6ZWE6-2;Q6ZWE6 C9J119 PLEKHM3 Pleckstrin homology domain-containing family M member 3 1 S(1)VNDLLDETSTFKPGHAR;S(1)VNDLLDETSTFKPGHAR 85.945 1.8421e-05 5595000.0 1151.71 1042.3 1373.23 1161.83 1215.81 932.1800000000001 1358.42 1133.95 1302.2 1306.42 1376.87 True False 1268.63075135591 1130.1382789521688 1466.4256457028184 1233.5936003926247 1130.4156999167994 924.5886351432937 1410.1154164559468 1111.3324776834343 1247.4730625224827 1223.9324182449684 1207.5237186980553 1.0506052441965612 0.9359139381300742 1.21440732218818 1.021589540056967 0.9361436818281357 0.765689833521597 1.1677745079627295 0.92034008150305 1.0330836928549119 1.0135887182113532 1.0 10.23783581203534 -6.513907427957663 24.83839139112056 0.9958683023339197 1.0645575194855905 0.10043722569602787 0.10984298016685497 827.8092198175078 2291905.533763378 0.014784343633479483 0.03214987001249281 3.0626161760860014e-07 6.513907427957663 0.06868921715167087 S(ph)VNEGAYIR ddPTM_A549_MK2206_60min_R1 2 SVNEGAYIR 9 0 O95625 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 1 S(0.999)VNEGAY(0.001)IR;S(1)VNEGAYIR 78.324 0.001842 8138700.0 2400.6000000000004 3417.3999999999996 2490.2 2685.2 4794.7 3469.6000000000004 3372.5 3379.0 5907.3 5278.4 4584.200000000001 True False 2805.762590964967 3591.3310631044205 2843.34780485677 3343.0741205432096 4089.4059815006813 3836.7507690659186 3985.2395956529135 3857.9835977535026 4569.305982019676 4086.0057739919876 3445.816622516382 0.8142518590893553 1.0422293048437887 0.8251593501166508 0.9701834098478107 1.1867741175716728 1.1134518140039757 1.1565443063950995 1.1196137288745582 1.3260444424587057 1.185787353654384 1.0 11.75063021175436 -6.6528296947896415 4.440559528174465 1.1535214708407453 0.9072442439561361 0.6228516106240336 0.09171728805248 0.1508136735689482 5.1809791729515355 0.01770018107661155 0.03769963849625017 2.2241819153367745e-07 6.6528296947896415 -0.24627722688460918 S(ph)VNFSLT(ph)PNEIK ddPTM_A549_PD325901_60min_R1 2 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(1)VNFS(0.003)LT(0.997)PNEIK;S(1)VNFS(0.012)LT(0.988)PNEIK 83.823 0.0004444 1863800.0 1427.7 1626.5 1621.0 1394.9 1685.8 1450.4 1448.5 1844.8 1805.8 1374.0 1320.2 True False 1572.6390529828102 1763.570863202246 1731.0108078648636 1481.0598049522482 1567.3952236942791 1438.5884232785868 1503.623460149614 1808.004016782397 1729.9085058386568 1287.2454055116928 1157.8237694373265 1.3582715215348131 1.5231772828945267 1.4950555115189004 1.279175504983808 1.353742482291579 1.2424934271108503 1.2986634925281741 1.5615537221705527 1.4941034650544005 1.11178008215988 1.0 10.177199964321613 -10.800624699807319 1.0101825085008895 0.9962685046922897 1.4037594027476732 0.6069429546782321 0.1058416175123344 0.27282468826250267 0.48709994032147413 0.08036913225992495 0.019369307176498634 1.5826150821579562e-11 10.800624699807319 0.4074908980553835 S(ph)VNFSLTPNEIK ddPTM_A549_MK2206_60min_R1 1 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)VNFSLTPNEIK 175.6 5.9196e-16 44178000.0 6142.9 6073.4 5147.1 4888.7 8370.7 6611.9 6969.4 6641.6 8926.6 7823.8 8127.4 True False 7179.671340514328 6382.5101184111845 5877.036176362652 6086.431719462085 7139.381118599239 7311.566869375993 8235.649766625176 7583.067139046955 6904.739352851025 6056.398146134916 6109.142275171158 1.175233939090603 1.0447473361933395 0.9620067616117186 0.9962825295784363 1.168638868931763 1.196823799486835 1.3480860971427353 1.2412654342437135 1.1302305695045507 0.9913663609946349 1.0 12.576754124244383 -4.532505126400059 4.503303371752876 1.0960416103009216 11.306592823325554 0.01721491466814895 0.11754268705582008 4043.02650710947 497.46477703437785 0.017788112773162734 419310.8389242436 2.934234868124279e-05 4.532505126400059 10.210551213024631 S(ph)VNFSLTPNEIK ddPTM_A549_PD325901_60min_R1 2 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.999)VNFS(0.001)LTPNEIK;S(1)VNFSLTPNEIK 209.39 2.0399999999999995e-31 129145000.0 17400.7 16604.0 18122.3 17238.300000000003 20557.1 17947.9 16873.5 17641.9 18392.2 18637.800000000003 19872.2 True False 19167.206254281697 18003.277351743065 19352.188256242724 18303.070639980182 19113.24021414501 17801.73825300728 17515.630276033487 17290.01846469719 17619.23979459838 17461.00612725316 17428.045380254847 1.0997909310012033 1.0330061093448797 1.1104049727898826 1.0502078827908434 1.0966944254000743 1.0214420415255407 1.0050255145581541 0.9920801838332349 1.0109705024385665 1.0018912474852548 1.0 14.089123154501316 -7.409015460627345 4.375002305708957 1.0043883741746216 1.0755858002357683 0.7467623418411173 0.021256664107791232 0.08223287416344637 2.5991922904238813 0.0028192839710734665 0.004552292871290557 3.899281052189499e-08 7.409015460627345 0.07119742606114676 S(ph)VPADLSR ddPTM_A549_MK2206_60min_R1 4 SVPADLSR 8 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.998)VPADLS(0.002)R;S(1)VPADLSR;S(1)VPADLSR;S(1)VPADLSR 70.439 0.0065964 44417900.0 4999.45 5379.860000000001 4627.21 4861.83 7823.11 5785.8099999999995 5982.43 5451.93 7874.2300000000005 7157.84 7509.96 True False 5843.234935182784 5653.671894760035 5283.417956835309 6052.978568255842 6672.340882211152 6398.060573890157 7069.360093171785 6224.757773335384 6090.729477561453 5540.878972664223 5645.029667648254 1.0351114660513563 1.0015309444981857 0.9359415747829729 1.0722669187985936 1.1819850868898765 1.1333971565388812 1.252315844093148 1.1026970874944306 1.0789543786576554 0.9815500181370311 1.0 12.462765447813869 -6.3548460608263415 8.794594485246561 1.0772384533454784 0.9920644115412001 0.2500844849456203 0.07725728519597655 0.4920774545813555 42.61579520278206 0.012403760879993753 0.02887614380708201 4.4172699329431597e-07 6.3548460608263415 -0.08517404180427834 S(ph)VPADLSR ddPTM_A549_PD325901_60min_R1 2 SVPADLSR 8 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.999)VPADLS(0.001)R;S(0.998)VPADLS(0.002)R 47.853 0.036689 37139000.0 11384.0 12245.7 10727.7 11175.3 12537.6 10362.0 10211.3 10382.5 10732.400000000001 14595.900000000001 12831.6 True False 12539.695299542136 13277.688115287883 11455.74623290063 11865.572900052244 11657.002228371917 10277.61530751015 10599.896609337766 10175.412892586322 10281.354550926348 13674.312383048127 11253.394546214206 1.1143033551383532 1.1798829287252421 1.0179813909354576 1.0543994393268636 1.0358654164750218 0.9132902312545044 0.941928816750117 0.9042083125050894 0.913622508186664 1.2151277845002202 1.0 13.458072630439696 -6.344532018031982 0.9416607987153947 0.9503742400525749 1.1494226116452095 0.22069728307912773 0.09070153967304743 0.3089444415046025 0.4545361672803485 0.007823211319175613 0.04241636918149655 4.5234311244955813e-07 6.344532018031982 0.19904837159263467 S(ph)VPAFLQDESDDRETDTASESSYQLSR ddPTM_A549_MK2206_60min_R1 1 SVPAFLQDESDDRETDTASESSYQLSR 27 1 Q9HCH5-13;Q9HCH5;Q9HCH5-14;E9PS39;E9PK22;E9PRW5;E9PS29;Q9HCH5-2;A0A0U1RR07;Q9HCH5-7;A0A0U1RQP0;Q9HCH5-12;Q9HCH5-8 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 S(0.986)VPAFLQDES(0.014)DDRETDTASESSYQLSR 61.941 0.00017438 4079800.0 933.99 988.35 919.42 807.25 1482.6 1090.7 1192.9 802.45 1788.3 1373.3 1721.2 True False 1091.6246781368693 1038.6527934158291 1049.8075812149268 1005.0262862388291 1264.5115039883444 1206.1171500519356 1409.634488852293 916.1997449000585 1383.2529053282865 1063.0705762017276 1293.778537296627 0.8437492558949372 0.8028057070618224 0.811427575084464 0.7768147772329329 0.977378637483478 0.9322439005458681 1.089548518711517 0.7081580954453565 1.0691574063507172 0.8216789392897429 1.0 10.337374969621694 -7.165697560674281 0.5463097024527519 1.0245859784560907 0.784855141387001 0.019638810150935604 0.11931341673977644 0.758020585988249 0.40793200076359515 0.023065806877125335 0.08050375421706256 6.828140350352732e-08 7.165697560674281 -0.2397308370690897 S(ph)VPEDDGHALLAER ddPTM_A549_MK2206_60min_R1 2 SVPEDDGHALLAER 14 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(1)VPEDDGHALLAER;S(1)VPEDDGHALLAER 59.607 0.0078352 2903600.0 1029.01 1321.6399999999999 1032.4099999999999 1040.81 1909.08 1199.9299999999998 1463.6100000000001 1284.73 1633.59 1499.51 1735.49 True False 1202.681731120911 1388.9058308191402 1178.8212622328235 1295.8084967237369 1628.2568609429845 1326.9057961509295 1729.5289917252956 1466.8444118206146 1263.5844733071826 1160.7696495450764 1304.5199359126898 0.9219343438239378 1.0646873172140607 0.9036437311385948 0.993322111108361 1.2481655635287754 1.0171602285422934 1.3257972868887236 1.1244323459068923 0.9686202859162384 0.8898059873136086 1.0 10.349303276515883 -4.326506180039033 14.865708303392847 1.0280843952188081 1.0382609477100564 0.0 0.13457613112574063 0.0 0.0 0.017133432843024467 0.0 4.715131616254158e-05 4.326506180039033 0.01017655249124827 S(ph)VPEDDGHALLAER ddPTM_A549_PD325901_60min_R1 4 SVPEDDGHALLAER 14 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(1)VPEDDGHALLAER;S(1)VPEDDGHALLAER;S(1)VPEDDGHALLAER;S(1)VPEDDGHALLAER 125.52 1.6975999999999998e-07 29296500.0 1553.87 1777.75 1861.63 1664.2199999999998 2124.43 1782.0900000000001 1679.1000000000001 1745.834 1824.59 1914.48 1650.5100000000002 True False 1711.6177385013648 1927.567231514167 1987.9714066906038 1767.0150896821508 1975.2173656856312 1767.5772498900567 1742.9990693387763 1711.011971289722 1747.908827482642 1793.5994060727985 1447.507733444935 1.1824584414674404 1.3316455497800586 1.3733753269555355 1.2207292913570955 1.3645642921608412 1.2211176555743752 1.2041380015225198 1.1820399516745042 1.2075298715833318 1.239094869499728 1.0 10.499355340629865 -10.798920694581012 0.2521428874662837 0.847679738363609 1.3151566312365797 0.12514761107471084 0.09262634665724036 1.9121795220788345 0.15606440799918508 0.2740992856894084 0.04289736210033763 1.5888368555963888e-11 10.798920694581012 0.4674768928729707 S(ph)VPGPLK ddPTM_A549_MK2206_60min_R1 2 SVPGPLK 7 0 F5H5B4;Q13043-2;Q13043 F5H5B4 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit 1 S(1)VPGPLK;S(1)VPGPLK 62.2 0.027458999999999997 7159200.0 1851.5 2311.3 1878.3400000000001 1906.49 3343.2 2378.6000000000004 1997.54 2425.6000000000004 3068.3 2802.7 3284.0 True False 2163.987935171055 2428.935297639506 2144.716856386902 2373.5801355855874 2851.4197087102584 2630.301873213105 2360.4671614234317 2769.436228088455 2373.334949068267 2169.5681234403123 2468.492166210854 0.8766436307929573 0.9839752910246955 0.8688368088601437 0.9615506048897222 1.1551260918470727 1.065550018435193 0.9562384656244458 1.1219141247426163 0.9614512784585201 0.8789041963096883 1.0 11.26941435133855 -6.523775709113118 24.99993888372749 1.0085738572595482 0.9168941439741115 0.2690799150077825 0.07853581166169368 31.82526897875449 887032.6983149203 0.010085195012362524 0.02113507909336996 2.993810387362772e-07 6.523775709113118 -0.09167971328543667 S(ph)VPGPLK ddPTM_A549_PD325901_60min_R1 2 SVPGPLK 7 0 F5H5B4;Q13043-2;Q13043 F5H5B4 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit 1 S(1)VPGPLK;S(1)VPGPLK 61.961999999999996 0.027637000000000002 15591900.0 5114.0 5170.3 5049.0 4656.4 5827.5 5246.7 5106.6 5718.5 5543.0 6780.3 6642.700000000001 True False 5633.169515272181 5606.019326169431 5391.655502103457 4944.015252548321 5418.196503783609 5203.972614737838 5300.934457438744 5604.440031423537 5310.046986301738 6352.1907008667595 5825.6900115447115 0.9669531856499377 0.9622927610394715 0.9254964633234635 0.8486574539240528 0.9300523187890917 0.8932800414071428 0.9099238797350933 0.9620216695906021 0.9114880770825209 1.0903756788086367 1.0 12.50821322151533 -10.825382678028932 0.7143264486174407 1.0092548911322285 0.9209637187163653 0.4936342967338899 0.042986315024904236 0.7302826821882703 0.5437753874894193 0.03983974315913901 0.006565617976632664 1.4949178306393885e-11 10.825382678028932 -0.08829117241586326 S(ph)VPGTTLESFR ddPTM_A549_MK2206_60min_R1 1 SVPGTTLESFR 11 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(1)VPGTTLESFR 96.604 0.00028143 7798300.0 1059.4 1010.9 1231.5 1315.2 1744.9 1297.3 1508.5 1260.8 1899.4 1951.3 2226.6 True False 1238.200820156747 1062.3504920969922 1406.1452179267178 1637.4240590415707 1488.2275214550525 1434.579424921955 1782.5749236597244 1439.522261038063 1469.18893271853 1510.4999747632937 1673.6737689662252 0.7398101369071132 0.6347416753464279 0.8401548999571457 0.9783412331621563 0.8891980916772586 0.8571439975474127 1.065067133579302 0.8600972828338046 0.877822763289169 0.9025056153543478 1.0 10.708802631092064 -5.951155338970461 4.13210306964496 0.9356762201326825 0.6896071288577734 0.6649994217504995 0.06555621980122346 0.0908821542812218 3.287647652333483 0.009525182017673307 0.031461602994046566 1.1190375531837693e-06 5.951155338970461 -0.24606909127490906 S(ph)VPGTTLESFR ddPTM_A549_PD325901_60min_R1 2 SVPGTTLESFR 11 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.998)VPGT(0.001)T(0.001)LESFR;S(1)VPGTTLESFR 103.43 0.00021229 27318000.0 3555.4 3728.3 3212.3 2851.7 3467.5 2955.3 3052.0 2984.1 2820.4 3703.0 4451.200000000001 True False 3916.3415906528544 4042.49692546999 3430.3059951291193 3027.8430323193975 3223.9547622255955 2931.2330166265933 3168.1455301184824 2924.579784518837 2701.868396205199 3469.1919480420665 3903.730618481617 1.0032304924196185 1.0355471011066708 0.8787250787461766 0.775628066645925 0.8258650704437118 0.7508799410361765 0.8115686864045846 0.7491756143912339 0.6921247033321447 0.888686307302483 1.0 11.930637786131152 -5.866893624850793 4.069183843117829 0.827393059005417 1.0197945016624412 0.4983205829525591 0.07843488215471221 0.2033510990913025 6.087749664516116 0.016067661933358072 0.055819817505439226 1.3586461896880886e-06 5.866893624850793 0.1924014426570242 S(ph)VPGTTLESFRR ddPTM_A549_PD325901_60min_R1 1 SVPGTTLESFRR 12 1 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(1)VPGTTLESFRR 116.63 9.892599999999999e-06 9046900.0 1724.5 1388.3 1656.3 1819.4 1653.0 2227.7 1789.8 1823.8 2497.9 1992.1 1926.5 True False 1899.5699704901983 1505.2969132392743 1768.7064781410086 1931.7802058428008 1536.8989825404217 2209.5583497915795 1857.911818416139 1787.4228782565779 2392.92194968124 1866.318466026087 1689.5527130896915 1.124303465510968 0.8909440360026011 1.046848946728965 1.143367822072948 0.9096484357270443 1.3077771014027446 1.0996471456747678 1.057926671602871 1.4163049966670143 1.104622810266241 1.0 10.722425647135825 -7.260332122918769 24.998358087513278 1.1884815932930648 1.023694387657836 0.2123169624338317 0.13116189962176747 134.53146436700368 3037288.968147127 0.024852043807309793 0.041539167873100254 5.4912077791817646e-08 7.260332122918769 -0.16478720563522886 S(ph)VPTAYR ddPTM_A549_MK2206_60min_R1 1 SVPTAYR 7 0 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 S(0.992)VPT(0.003)AY(0.005)R 62.54600000000001 0.027198000000000003 2972800.0 1212.1 1311.2 1314.2 1119.4 1625.7 1429.2 1050.9 1395.7 1990.6 2070.1 2057.8 True False 1416.6728470001808 1377.9344794119852 1500.5733214772972 1393.653050251776 1386.5616835517671 1580.436995373821 1241.8349269300659 1593.5447491519874 1539.7322783350025 1602.4629722531101 1546.7914676092246 0.9158783692994119 0.890834031779196 0.9701199889579403 0.9009960808782165 0.8964115154416294 1.0217518188257142 0.802845731266859 1.0302259758485908 0.9954362372549591 1.0359916031408767 1.0 10.59506299604196 S(ph)VPVTVDDDDDDNDPENR ddPTM_A549_MK2206_60min_R1 2 SVPVTVDDDDDDNDPENR 18 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 S(1)VPVTVDDDDDDNDPENR;S(0.828)VPVT(0.172)VDDDDDDNDPENR 127.75 2.0755e-12 3265400.0 743.27 926.4100000000001 887.96 795.95 1228.27 905.91 633.04 763.77 1498.72 1140.1 1186.71 True False 868.7158047931897 973.5603119829599 1013.8860801544519 990.957785731553 1047.5931100794305 1001.7727949056101 748.0551737975155 872.0367364475263 1159.2623129640488 882.5506181661616 892.017155470183 0.9738779119503469 1.0914143366108193 1.1366217274375532 1.1109178558446204 1.1744091508276469 1.1230420724112362 0.838610747798023 0.977600857898159 1.2995964324845306 0.9893874941238865 1.0 9.800927646415547 S(ph)VPVTVDDDDDDNDPENR ddPTM_A549_PD325901_60min_R1 2 SVPVTVDDDDDDNDPENR 18 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 1 S(0.891)VPVT(0.109)VDDDDDDNDPENR;S(0.998)VPVT(0.002)VDDDDDDNDPENR 115.31 5.4934e-10 3997800.0 1299.7199999999998 1242.6999999999998 889.29 1327.6 1451.6 1015.8199999999999 1219.62 1556.7 1562.8400000000001 1610.58 1152.6000000000001 True False 1431.6666175967055 1347.4266902560294 949.6425671351919 1409.6028368016382 1349.6446237481396 1007.5474987140475 1266.0333065016723 1525.6503972924754 1497.1592697224978 1508.887703936697 1010.8375069333912 1.416317269370026 1.3329805047932572 0.9394611504040365 1.3944900413103918 1.3351746591226101 0.9967452649938517 1.2524597651134617 1.5092934193952576 1.481107754167607 1.4927104441486903 1.0 9.981335385975596 -11.042755727077207 1.3776083457130255 1.0019238059612399 1.3090578720483246 0.0 0.2245827890968493 0.4549987279066289 1.5550845993154203 0.12691837159038002 0.02916821211316318 9.062421818196445e-12 11.042755727077207 0.3071340660870847 S(ph)VQAHEVHQK ddPTM_A549_MK2206_60min_R1 6 SVQAHEVHQK 10 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 S(1)VQAHEVHQK;S(1)VQAHEVHQK;S(1)VQAHEVHQK;S(1)VQAHEVHQK;S(1)VQAHEVHQK;S(1)VQAHEVHQK 98.59200000000001 0.00015102 43750100.0 11042.800000000001 10858.390000000001 10254.86 8521.41 14722.4 11594.8 9203.26 11231.099999999999 17322.0 14853.6 16719.800000000003 True False 12906.554669460944 11411.03567106643 11709.153349174167 10609.155832540637 12556.754462645355 12821.754039994663 10875.373213072982 12823.14281880122 13398.594657549953 11498.161443726776 12567.8122169952 1.0269531758286194 0.9079572063971098 0.9316779362234673 0.8441529559292816 0.9991201528031353 1.0202057302110277 0.8653354319192034 1.0203162330402058 1.0661039826352037 0.9148896598071415 1.0 13.617445909308064 -8.45530303667821 12.33949459641271 1.0318462716674353 0.9419370798843476 0.08823247853130145 0.06686466085187975 1.0768744465353335 195.54502719955758 0.009414607252229602 0.011380200680980945 3.505072159780717e-09 8.45530303667821 -0.08990919178308765 S(ph)VQAHEVHQK ddPTM_A549_PD325901_60min_R1 3 SVQAHEVHQK 10 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 S(1)VQAHEVHQK;S(1)VQAHEVHQK;S(1)VQAHEVHQK 113.59 3.1876e-05 45283000.0 11183.5 10609.400000000001 11535.0 10342.9 11361.0 10565.8 11024.2 10330.3 10986.0 11966.3 12918.099999999999 True False 12318.84068714243 11503.491371692542 12317.834465589887 10981.7574425698 10563.042553322279 10479.75562787982 11443.731963673717 10124.254062536425 10524.296624844103 11210.74577581846 11329.255594582886 1.0873477594620353 1.0153792785108464 1.087258943251284 0.969327362322089 0.9323686331494742 0.925017141716773 1.0101044916971922 0.893638066333093 0.9289486442406969 0.989539487588126 1.0 13.467765449420531 -6.329627654287842 6.224459216901143 0.9582110433606512 1.0583347223102304 0.6125794594433256 0.037922210286929714 0.12695844609704462 9.212204727931878 0.005684579201669777 0.013396267020673994 4.6813632956206314e-07 6.329627654287842 0.10012367894957919 S(ph)VQEGENPDDGVR ddPTM_A549_MK2206_60min_R1 2 SVQEGENPDDGVR 13 0 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 S(1)VQEGENPDDGVR;S(1)VQEGENPDDGVR 301.75 1.3517999999999997e-117 195589000.0 6224.9 7498.2 6529.4 7120.299999999999 11814.099999999999 11431.5 9320.9 10819.2 14221.0 13094.5 13755.8 True False 7275.510935806803 7879.826352598347 7455.367101851973 8864.773819642409 10076.261540043635 12641.173742384439 11014.386878316154 12352.854732410391 10999.966206270507 10136.44335547478 10339.855219233634 0.7036376024176136 0.7620828517928108 0.7210320593255413 0.8573402268875719 0.9745070241699636 1.2225677704722613 1.0652360835602217 1.1946835299426906 1.063841414898051 0.9803273972946469 1.0 13.335928364432858 -6.666302187138433 2.286554367076897 1.060139925287195 0.7340901604522956 0.8139793359042887 0.07363389221327503 0.1030963894639473 1.0924039129844978 0.011398547620852368 0.026809010488450902 2.1562435477813345e-07 6.666302187138433 -0.32604976483489945 S(ph)VQEGENPDDGVR ddPTM_A549_PD325901_60min_R1 2 SVQEGENPDDGVR 13 0 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 S(1)VQEGENPDDGVR;S(1)VQEGENPDDGVR 316.6 1.2504999999999998e-155 225110000.0 9627.3 11482.4 11454.3 12141.0 13038.5 13000.0 12401.6 13823.6 12377.7 14785.7 15998.1 True False 10604.656408756327 12450.062145486301 12231.657678301377 12890.921995788416 12122.720740383107 12894.132310136267 12873.549674415915 13547.877453595589 11857.508313611219 13852.128378656658 14030.435120311535 0.7558323257846945 0.8873610860052826 0.8717946074668697 0.9187827665534427 0.8640302767826015 0.9190115773009585 0.9175445781990879 0.9656063648363009 0.8451276251899971 0.9872914317962423 1.0 13.776272130929323 -14.999999999999984 0.2999705324094778 2.0227337197034045 0.874194358069155 0.4353252925900002 0.05009974583619993 33.16845473358041 0.4387075300996898 20.587336337560995 0.01871682863020368 1.0000000000000368e-15 14.999999999999984 -1.1485393616342496 S(ph)VQEGENPDDGVRGS(ph)PPEDYR ddPTM_A549_MK2206_60min_R1 3 SVQEGENPDDGVRGSPPEDYR 21 1 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 2 S(1)VQEGENPDDGVRGS(1)PPEDYR;S(1)VQEGENPDDGVRGS(0.902)PPEDY(0.098)R;S(0.995)VQEGENPDDGVRGS(0.859)PPEDY(0.145)R 107.04 1.9599e-10 13753400.0 1083.79 969.32 815.2 843.9100000000001 1216.04 1155.41 990.42 1009.53 1970.98 1694.1100000000001 1691.17 True False 1266.7072558784967 1018.6542476995312 930.8076180705324 1050.66798788456 1037.1621268784472 1277.6747193009148 1170.366493795866 1152.6339690559612 1524.556177008301 1311.4093743895055 1271.205815082463 0.996461187361958 0.8013291283075599 0.7322241662418378 0.8265128867557952 0.815888438026982 1.0050887937592012 0.9206742762736218 0.9067249027500632 1.1992992471556647 1.031626317965226 1.0 10.31198191402963 -8.026239441994015 1.0904271713037728 1.0887722128921355 0.8339029648146824 0.4483618330450815 0.09443600975235876 0.28262283095910096 0.6690067236646946 0.020201385661667084 0.0296680722942513 9.413704424161927e-09 8.026239441994015 -0.25486924807745315 S(ph)VQEGENPDDGVRGS(ph)PPEDYR ddPTM_A549_PD325901_60min_R1 2 SVQEGENPDDGVRGSPPEDYR 21 1 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 2 S(1)VQEGENPDDGVRGS(0.944)PPEDY(0.056)R;S(1)VQEGENPDDGVRGS(0.999)PPEDY(0.001)R 123.31 1.4081e-15 16407400.0 1084.0900000000001 812.19 746.57 959.25 1281.15 820.06 1236.72 1175.44 898.86 1480.1599999999999 1543.6100000000001 True False 1194.1460187351233 880.6361016810527 797.2367296901119 1018.5006938851852 1191.166443727562 813.3817032500259 1283.7840563591512 1151.994927085158 861.0840400698505 1386.702444994314 1353.755755750002 0.8820985718162636 0.6505132834638745 0.5889073610981105 0.752351884421662 0.8798976024058616 0.6008334219782502 0.9483129071890185 0.8509621637375309 0.6360704554070733 1.0243372477674593 1.0 10.402751756401013 -10.966760371307398 1.173801914277236 1.0031566112818677 0.7429054447591349 0.402569087915841 0.11968457599734997 0.41933634205784276 1.0065031103237085 0.09006437671221164 0.019803169911854723 1.0795422120296568e-11 10.966760371307398 -0.26025116652273284 S(ph)VQPTSEER ddPTM_A549_MK2206_60min_R1 2 SVQPTSEER 9 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;Q9UHD8-3;K7ER14;Q9UHD8-9;K7ENQ5;K7ER52;K7EJZ2;K7ELJ9;K7EN52;K7EKN4;Q9UHD8-8;K7EIE4;K7EIR4;K7EQD7;K7EK18;K7EL40;Q9UHD8-4 Q9UHD8 SEPT9 Septin-9 1 S(1)VQPTSEER;S(1)VQPTSEER 147.62 2.7870999999999998e-05 20725000.0 2621.8999999999996 2999.0 2471.4 2504.1 3531.8 1878.4099999999999 1838.6599999999999 2115.21 3401.3 4226.3 4171.5 True False 3064.412620699426 3151.6362902353135 2821.881682163288 3117.6046124133195 3012.2768985471707 2077.1820994123555 2172.720721999461 2415.047495058949 2630.910980759996 3271.575894707174 3135.6014224569344 0.9772966036921467 1.005113809320132 0.8999491012962266 0.9942604918103675 0.9606695790394395 0.6624509366961433 0.6929199312255071 0.7702023215586542 0.8390450909728563 1.0433647182567276 1.0 11.614526469628588 -7.043172282947365 24.992037790616955 0.8713154839148691 0.9681161359975929 0.223019334468613 0.11267759585047081 797.3094892057562 461553.88331420894 0.018861835846895894 0.032671162664153694 9.05373371522938e-08 7.043172282947365 0.09680065208272381 S(ph)VQPTSEER ddPTM_A549_PD325901_60min_R1 2 SVQPTSEER 9 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;Q9UHD8-3;K7ER14;Q9UHD8-9;K7ENQ5;K7ER52;K7EJZ2;K7ELJ9;K7EN52;K7EKN4;Q9UHD8-8;K7EIE4;K7EIR4;K7EQD7;K7EK18;K7EL40;Q9UHD8-4 Q9UHD8 SEPT9 Septin-9 1 S(1)VQPTSEER;S(1)VQPTSEER 134.98 4.5746000000000006e-05 25580000.0 2353.82 2479.54 2511.02 2308.7 2702.42 2824.54 2565.7 2305.7799999999997 2464.79 2765.04 2977.2700000000004 True False 2592.7780736092996 2688.499537746388 2681.4329171899017 2451.3031555618736 2512.6113420428846 2801.5378827132517 2663.339117504911 2259.7894090505824 2361.203447838113 2590.4549025153215 2611.084664469528 0.9929888941904733 1.0296485496354395 1.0269421569042327 0.938806461896127 0.962286430705743 1.0729402691668048 1.0200125464127756 0.8654600288534439 0.9042998413526429 0.992099160078979 1.0 11.3504335224852 S(ph)VRPGASYK ddPTM_A549_MK2206_60min_R1 4 SVRPGASYK 9 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8 B7Z8L1 PPHLN1 Periphilin-1 1 S(1)VRPGASYK;S(1)VRPGASYK;S(1)VRPGASYK;S(1)VRPGASYK 97.911 0.00023686 46014400.0 11320.4 12124.3 11194.300000000001 10750.8 15306.7 12327.5 10915.9 11767.800000000001 17390.399999999998 15759.3 17633.300000000003 True False 13231.00676279255 12741.37508292764 12781.82006742758 13384.746482621747 13055.104706662878 13631.987867667765 12899.177732301741 13435.921687376052 13451.502166762299 12199.263184690806 13254.464955677786 0.9982301667427784 0.9612892806713895 0.9643407040698583 1.0098292558303648 0.9849590119494406 1.0284826972082537 0.9731949026562667 1.0136902343704592 1.0148657234934337 0.9203889576444226 1.0 13.694190813513964 -6.2663182719590536 24.85735203653837 1.005328182028474 0.9732869730269682 0.0 0.030531556658810875 250.27988461064948 1275145.5329960939 0.0021667705238818617 0.005196246946426093 5.416038314973387e-07 6.2663182719590536 -0.032041209001505866 S(ph)VRPGASYK ddPTM_A549_PD325901_60min_R1 2 SVRPGASYK 9 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8 B7Z8L1 PPHLN1 Periphilin-1 1 S(1)VRPGASYK;S(1)VRPGASYK 84.71799999999999 0.0003711 76257000.0 11515.0 10474.8 13059.1 12553.4 13307.9 11915.2 13450.8 12008.3 13559.0 13882.4 14301.900000000001 True False 12683.99432310504 11357.548157313802 13945.369056747722 13328.79500716006 12373.199013762664 11818.166561671966 13962.677554560181 11768.78503617089 12989.162382692633 13005.862894814789 12542.85696721384 1.011252408941609 0.905499296292834 1.1118175941254813 1.0626602090736272 0.9864737392848654 0.9422228597969214 1.1131975427175527 0.9382858360685831 1.035582436812076 1.0369139127402325 1.0 13.614578377049767 -4.37108739528799 15.145167067608009 1.0134539342487874 1.0129702925883177 0.0 0.06493184853920092 0.0 0.0 0.007654834838707209 0.0 4.2551277641675634e-05 4.37108739528799 -0.00048364166046965806 S(ph)VRPGVVVPR ddPTM_A549_MK2206_60min_R1 2 SVRPGVVVPR 10 1 A6NCL7 A6NCL7 ANKRD33B Ankyrin repeat domain-containing protein 33B 1 S(1)VRPGVVVPR;S(1)VRPGVVVPR 90.79299999999999 0.0001825 10205700.0 953.8699999999999 972.1099999999999 844.46 642.08 1350.9099999999999 901.8399999999999 697.65 984.0799999999999 1518.1100000000001 1376.74 1408.76 True False 1114.8599361175334 1021.5862467824779 964.2171260498548 799.3896288240668 1152.1929285396554 997.272110207057 824.4039744721287 1123.5763536186046 1174.2605089235174 1065.7334778125437 1058.9260122019498 1.0528213711544148 0.9647380789694392 0.9105613753361713 0.7549060270620812 1.0880768960843306 0.9417769501509473 0.7785284004477784 1.0610527465296842 1.108916482731158 1.0064286508520444 1.0 10.048386075542568 S(ph)VRPGVVVPR ddPTM_A549_PD325901_60min_R1 1 SVRPGVVVPR 10 1 A6NCL7 A6NCL7 ANKRD33B Ankyrin repeat domain-containing protein 33B 1 S(1)VRPGVVVPR 95.273 0.00015635 5294900.0 705.13 954.6 739.07 581.17 691.48 693.54 816.97 1061.8 668.27 1068.9 969.15 True False 776.7142785107299 1035.0474921689913 789.2277345889489 617.0675509671647 642.9128302764974 687.892040182454 848.0602404131382 1040.6215660340135 640.1849358715248 1001.4094715803849 849.9506939480269 0.9138345130384994 1.2177735715011755 0.9285570800854113 0.7260039380647854 0.7564119128959855 0.8093317001568534 0.9977758079988057 1.2243316858773525 0.7532024391883972 1.1781971339170638 1.0 9.731235342013447 -5.977269812188903 23.852674626050238 0.8886486366690693 1.0676446544446887 0.045154889787991315 0.17466910449053213 188.135228836484 197421.49837291052 0.02221654193776749 0.0690655160777674 1.0537320456026642e-06 5.977269812188903 0.17899601777561935 S(ph)VS(ph)EPR ddPTM_A549_PD325901_60min_R1 2 SVSEPR 6 0 Q96CG9;Q7RTN0;O75298-2;O75298 Q96CG9 RTN2 Reticulon;Reticulon-2 2 S(1)VS(1)EPR;S(1)VS(1)EPR 73.665 0.053943 16850300.0 2171.84 2159.0 1969.97 2126.63 2142.24 1711.67 1422.02 1600.91 1776.55 2279.82 2510.1000000000004 True False 2392.3235979758956 2340.946507011158 2103.6640105919478 2257.9871051728437 1991.7764527267937 1697.7307270223791 1476.1357492592015 1568.978594160401 1701.8877816190425 2135.871776123484 2201.3736128348996 1.0867412891785748 1.06340263795409 0.9556142575375369 1.025717348480905 0.9047880110463441 0.7712142623696048 0.6705521228439971 0.7127270832232295 0.7731026535869912 0.9702450159620731 1.0 11.104188302059537 -6.850417585955921 3.4563726856626578 0.8488446167489774 1.03131739638581 0.4908626601905084 0.09992511238160483 0.23091417389601454 5.447986365927648 0.018600614852283936 0.037374814450993915 1.4111800041172565e-07 6.850417585955921 0.18247277963683262 S(ph)VS(ph)GSPESDELQELR ddPTM_A549_MK2206_60min_R1 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 2 S(0.993)VS(0.892)GS(0.106)PES(0.009)DELQELR 59.607 0.007302500000000001 676670.0 309.91 290.58 259.23 246.06 619.71 207.55 423.64 469.58 473.82 645.08 389.36 True False 362.2152314279568 305.3692808324699 295.9927120122964 306.3447110460532 528.5514799248731 229.51280323946025 500.60990431501835 536.1444030284374 366.5005265350603 499.35597997248254 292.6711662106754 1.2376184375034096 1.0433869683378851 1.0113490708518587 1.0467198221554053 1.8059567902374176 0.7842002552251716 1.7104859040150922 1.8319003199737862 1.2522604507997206 1.706201490354632 1.0 8.193136809064523 -2.0000025451063683 6.8910022787105305 1.208669710034042 1.1568186844700477 0.0 0.3770052745353398 0.0 0.0 0.04521173960859856 0.0 0.009999941396931878 2.0000025451063683 -0.051851025563994346 S(ph)VS(ph)GSPESDELQELR ddPTM_A549_PD325901_60min_R1 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 2 S(0.963)VS(0.566)GS(0.417)PES(0.054)DELQELR 57.328 0.012167 1251300.0 155.68 296.59 375.44 325.47 308.29 286.9 468.75 398.95 306.1 366.92 321.44 True False 171.48451899444132 321.58468018269565 400.9196161041237 345.5735427039992 286.63677394276243 284.5635815213918 486.588537759842 390.9926292797797 293.2356814914235 343.7526085810411 281.9049177760449 0.6083062344115423 1.1407558361155434 1.4221802842851725 1.2258514162514003 1.0167852913104436 1.00943106550365 1.7260732505078358 1.3869663302234332 1.0401935652799792 1.2193920251300128 1.0 8.139064835434842 -8.963301035832258 23.589358741792513 1.0177322266083166 1.205540335955023 0.010928516261474064 0.27422110181751336 168.65258040279647 108407.30310173021 0.04676488473066215 0.049623268279521064 1.0881755514145885e-09 8.963301035832258 0.18780810934670633 S(ph)VS(ph)PCSNVESR ddPTM_A549_MK2206_60min_R1 2 SVSPCSNVESR 11 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)VS(1)PCSNVESR;S(1)VS(0.999)PCS(0.001)NVESR 99.844 0.00031349 37986000.0 7712.6 7328.0 5996.7 5577.9 9786.8 7595.6 6081.0 6400.5 10112.0 9500.900000000001 10497.5 True False 9014.29832503391 7700.9638995813175 6847.122231702112 6944.485750401448 8347.174684495567 8399.361350448778 7185.838986261047 7307.790475709169 7821.648145545839 7354.640091338382 7890.6810337388615 1.1423980118434265 0.975956811161628 0.8677479424684997 0.8800869938486063 1.0578522498634575 1.0644659585826508 0.9106741174223034 0.9261292459374068 0.9912513396628437 0.9320665808048149 1.0 12.945934107283124 -8.976252170575968 23.63083140000529 0.9961403600746699 0.9734405937405192 0.0 0.08210196352353408 416.867278782051 414820.395185978 0.014297623481195669 0.014771733898278828 1.0562040523641603e-09 8.976252170575968 -0.022699766334150717 S(ph)VS(ph)PCSNVESR ddPTM_A549_PD325901_60min_R1 2 SVSPCSNVESR 11 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)VS(0.992)PCS(0.005)NVES(0.003)R;S(1)VS(0.948)PCS(0.047)NVES(0.005)R 74.475 0.0016184 54384000.0 9186.0 9810.2 9352.1 10165.6 10767.8 8921.6 9341.2 10710.900000000001 9320.4 10486.2 12526.5 True False 10118.555957624218 10636.939982899896 9986.789744745834 10793.506024247314 10011.506874893377 8848.945447547056 9696.684477700775 10497.262696961505 8928.696000564085 9824.099542413918 10985.819912025967 0.9210560557749202 0.9682427045118263 0.9090618474287465 0.9824943527821596 0.9113117596196868 0.8054879397631746 0.8826545997796669 0.9555283794039217 0.8127473481328428 0.8942527386289725 1.0 13.423354926950264 -6.9759431922533395 23.60911640185785 0.9023089525873338 0.9446047614199912 0.15386466751780192 0.05562442856052763 294.45380642657625 288970.7369294025 0.010837454084305483 0.0204798654809658 1.056955754921259e-07 6.9759431922533395 0.04229580883265738 S(ph)VS(ph)PPPK ddPTM_A549_MK2206_60min_R1 2 SVSPPPK 7 0 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)VS(1)PPPK;S(1)VS(1)PPPK 81.594 0.017672999999999998 39553000.0 11683.7 10930.1 10262.9 10001.8 14225.0 10220.2 10346.4 10822.6 15992.8 16232.900000000001 16391.8 True False 13655.622920960326 11486.39540376825 11718.333542070734 12452.241448997867 12132.521343743558 11301.694780380305 12226.206954029147 12356.736692822451 12370.456335253715 12565.87661576132 12321.263669334678 1.1082972727015508 0.9322416687142036 0.95106588549318 1.0106302229363997 0.9846815772589248 0.9172512725710197 0.9922851488405277 1.0028790085529993 1.0039925016815823 1.0198529106259968 1.0 13.588862606036095 -7.994458742146585 24.991594333165327 1.001801579388747 0.979194150703996 0.03855824205799574 0.047533401518534205 384.5224657742852 1734215.5792269497 0.006835903434146002 0.009429477541781238 1.0128409638504483e-08 7.994458742146585 -0.022607428684750963 S(ph)VS(ph)PPPK ddPTM_A549_PD325901_60min_R1 2 SVSPPPK 7 0 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)VS(1)PPPK;S(1)VS(1)PPPK 80.23899999999999 0.01838 71051000.0 14098.8 15873.3 15618.2 13948.3 16100.8 16693.4 16495.4 17632.9 17397.4 17483.5 17978.7 True False 15530.099797011997 17210.998698351195 16678.144971866153 14809.8548121123 14969.935352744586 16557.454485079135 17123.141473629235 17281.197976757543 16666.247779088197 16379.588826247224 15767.433876369394 0.9849478310029199 1.0915535675177472 1.057758992530905 0.9392685536679362 0.9494211594684397 1.0501045772510733 1.0859814988215448 1.0960057363967655 1.057004450423975 1.0388240061558314 1.0 13.944660262564499 S(ph)VS(ph)PPPKR ddPTM_A549_MK2206_60min_R1 6 SVSPPPKR 8 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR 98.249 0.0006051 379294600.0 46588.3 50285.4 47265.1 40810.0 57781.6 46269.6 41467.2 45847.1 61596.799999999996 67415.5 65589.5 True False 54451.26606542246 52844.71207369086 53968.00189998222 50808.4518320305 49282.00318282268 51165.818360725236 49001.25347986907 52346.06682585516 47645.223149877165 52186.29172790179 49301.81697189005 1.1044474506176603 1.071861349528372 1.0946452933114543 1.0305594185504252 0.9995981123965741 1.0378079653717014 0.9939036021290584 1.061747214219322 0.9663989296184071 1.058506459460842 1.0 15.589353196295257 -5.938392789863186 0.4289088189267401 0.9866011187500731 1.1487273762553702 0.3530407834908411 0.034125247378041824 1.3425392205094664 0.23744161378555467 0.006730386696019226 0.09970521544307337 1.1524105093064136e-06 5.938392789863186 0.1621262575052972 S(ph)VS(ph)PPPKR ddPTM_A549_PD325901_60min_R1 5 SVSPPPKR 8 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR 96.89 0.00061356 636957000.0 52364.6 59226.1 59918.6 60059.799999999996 69194.4 60771.7 58103.7 63263.7 63881.9 63811.8 71086.4 True False 57680.61564321889 64217.291301016034 63985.03651581227 63769.55744029756 64334.424051721035 60276.7954239929 60314.86809906466 62001.85587408741 61197.165898291314 59782.712057810066 62343.22345381724 0.9252106716289328 1.0300604900320411 1.0263350685293207 1.0228787333644518 1.0319393269643626 0.9668540072947124 0.9674647019775108 0.994524383552565 0.9816169666559685 0.9589287936337787 1.0 15.927945130929295 -7.2621330711760015 24.999834744727252 0.9878671620101933 1.0104748418063203 0.139553194433369 0.030815485837581053 100.2985409136266 3614669.5410674405 0.004232086833461916 0.007035439997999008 5.468483786634049e-08 7.2621330711760015 0.02260767979612699 S(ph)VS(ph)PYSR ddPTM_A549_MK2206_60min_R1 2 SVSPYSR 7 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.998)VS(0.83)PY(0.065)S(0.107)R;S(0.994)VS(0.494)PY(0.295)S(0.217)R 54.982 0.047387 29230000.0 2372.48 2301.91 2086.4300000000003 1842.67 2748.71 1933.99 2347.6 2243.84 2785.94 3242.8700000000003 3230.56 True False 2772.896622432961 2419.067386747439 2382.3171474127835 2294.1242327205987 2344.3784001941203 2138.6435381213373 2774.128532173395 2561.911191471802 2154.9290382320005 2510.303414728971 2428.322793079821 1.1418978689056902 0.9961885601211016 0.9810545592216391 0.9447361113845085 0.9654311226147843 0.8807080937575493 1.1424051777955728 1.0550126197277718 0.8874145745257047 1.0337601829059861 1.0 11.245744494156124 -5.1427657085272385 1.940765469196241 0.9642497413054067 1.2368697618766327 0.21612438703495862 0.07360931602133709 1.0945016090974022 3.3037601098271403 0.010723778571439782 0.5897211055691687 7.198372082094311e-06 5.1427657085272385 0.2726200205712259 S(ph)VS(ph)PYSR ddPTM_A549_PD325901_60min_R1 1 SVSPYSR 7 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.99)VS(0.839)PY(0.031)S(0.14)R 58.083 0.038707 32817000.0 1884.0 1560.5 1549.2 1827.3 1696.6 1465.6 1488.2 1571.6 1810.8 1759.3 1741.7 True False 2075.262293072505 1692.0088115752271 1654.3380280963909 1940.1681709005973 1577.4366689522558 1453.6646395181317 1544.8342653742866 1540.2532051036512 1734.6983732266249 1648.2174977559841 1527.4819415459726 1.3586165810720623 1.107711171932243 1.0830491563271947 1.2701742116420327 1.032703972497196 0.9516738627016893 1.0113600844346164 1.008360991518337 1.135658842205969 1.0790422151163466 1.0 10.576939608734849 -2.000000000260453 0.6726968919855465 1.0539524415507098 30.200625815408532 0.5358790239512393 0.07964410730376177 152.02531807874965 0.8318776709638209 0.01411881606253553 6643.458522397157 0.009999999994002848 2.000000000260453 29.146673373857823 S(ph)VS(ph)SSSYR ddPTM_A549_MK2206_60min_R1 1 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(0.999)VS(0.589)S(0.293)S(0.074)S(0.045)Y(0.001)R 43.77 0.055561 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)VS(ph)SSSYR ddPTM_A549_PD325901_60min_R1 1 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(0.998)VS(0.657)S(0.111)S(0.181)S(0.053)YR 55.083999999999996 0.011609 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)VSANPK ddPTM_A549_MK2206_60min_R1 1 SVSANPK 7 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.528)VS(0.472)ANPK 93.598 0.012129000000000001 73487000.0 14723.0 13803.0 11192.0 8938.0 16226.0 13689.0 13197.0 15430.0 13595.0 18511.0 19351.0 True False 17207.882457209536 14505.51374262021 12779.193892842737 11127.810401242072 13839.176894452225 15137.560893977221 15594.724075265083 17617.249752393178 10515.754206753925 14329.352243552163 14545.612639569496 1.18302906062531 0.9972432307979795 0.8785600310899632 0.7650286500116381 0.951433070395708 1.0406960001669099 1.0721256272727635 1.2111727562761903 0.7229502439895277 0.9851322593708413 1.0 13.828296441436636 -8.780307528615223 24.999992953562234 0.8691709847259763 1.0000984668954878 0.09390057037690702 0.13790702060776108 377.7836962569891 500555.1788590055 0.027460059304638726 0.02925622185431057 1.65841215199403e-09 8.780307528615223 0.13092748216951144 S(ph)VSDNDIR ddPTM_A549_MK2206_60min_R1 2 SVSDNDIR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 S(1)VSDNDIR;S(0.942)VS(0.058)DNDIR 98.04799999999999 0.0024445 9133100.0 1433.6100000000001 1566.8899999999999 1546.1 1373.31 1911.07 1234.23 1233.88 1325.6100000000001 1908.14 2070.54 2053.54 True False 1675.5683196006357 1646.6380082716937 1765.3602285314632 1709.7710116502287 1629.9541345791201 1364.8353993844325 1458.0600243985814 1513.5192770103647 1475.9493366734418 1602.8035759475179 1543.5893431792433 1.0855013524190074 1.0667591192876513 1.1436722055203175 1.1076592483650545 1.055950626882404 0.8841959199934346 0.9445906262837355 0.9805193872957525 0.9561800508634718 1.0383613899836301 1.0 10.592073273433932 -7.039424585620658 7.044496167022506 0.9699645288038091 1.0993428767872357 0.7187046474441836 0.039520060855512754 0.08673816996462715 12.716191501818281 0.005418896386849075 0.009545453459211817 9.132200003755883e-08 7.039424585620658 0.12937834798342662 S(ph)VSDNDIR ddPTM_A549_PD325901_60min_R1 2 SVSDNDIR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 S(0.923)VS(0.077)DNDIR;S(0.944)VS(0.056)DNDIR 86.898 0.002724 8945200.0 1233.3200000000002 1779.63 1551.28 1354.97 1845.1599999999999 1663.87 1532.54 1778.74 1670.12 1829.0 2066.9700000000003 True False 1358.5257384778022 1929.6056657120275 1656.5591894044467 1438.6634195398588 1715.562327056432 1650.319994374341 1590.8616483380654 1743.2616353054646 1599.9306643987477 1713.5166278609063 1812.7457936023864 0.7494298115446548 1.0644656699919357 0.9138397646547246 0.7936377094997248 0.9463888059269324 0.9103979169052357 0.8775977602334518 0.9616691107257576 0.8826006768545738 0.9452602973391616 1.0 10.823960910779654 -10.890075043643943 0.814375732622688 1.0092281348638676 0.9028947136530774 0.09357807892881698 0.08028483395781673 1.091432642727913 1.0906339961331657 0.07855255625681554 0.013341125255196545 1.2880269686469909e-11 10.890075043643943 -0.10633342121079026 S(ph)VSDPVEDKKEQES(ph)DEEEEEEEEDEPSGATTR ddPTM_A549_PD325901_60min_R1 2 SVSDPVEDKKEQESDEEEEEEEEDEPSGATTR 32 2 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 S(0.909)VS(0.091)DPVEDKKEQES(1)DEEEEEEEEDEPSGATTR;S(0.941)VS(0.096)DPVEDKKEQES(0.963)DEEEEEEEEDEPSGATTR 132.7 2.7497e-30 26619000.0 2529.7 3357.6000000000004 2967.0 3216.2 3406.3 3266.1 3477.2 3600.9 2660.0 4043.9 3526.1000000000004 True False 2786.5132817332883 3640.556735498223 3168.358462020389 3414.8573694798356 3167.053239097057 3239.501964472002 3609.526748796848 3529.077224648598 2548.2094503991743 3788.5674638637092 3092.4120537895437 0.901080849920567 1.1772547358418697 1.0245589549225105 1.1042698418198043 1.0241368821519259 1.047564783775244 1.1672205016707313 1.1412053643769595 0.824020022582862 1.2251172864305304 1.0 11.594516851127803 -8.755168435174896 24.999998451100176 0.9168983427302684 1.0768960500042635 0.0 0.12465976732645595 111.16074762441426 443157.35958546464 0.01548208221174629 0.01734437487660935 1.757241959522119e-09 8.755168435174896 0.1599977072739951 S(ph)VSEAALAQPQGPLGTDSLK ddPTM_A549_MK2206_60min_R1 1 SVSEAALAQPQGPLGTDSLK 20 0 M0R201;M0QY29;Q05469-2;Q05469 M0R201 LIPE Hormone-sensitive lipase 1 S(0.5)VS(0.5)EAALAQPQGPLGTDSLK 91.475 3.4755e-06 957680.0 790.74 1095.3 1024.7 902.06 1506.4 925.87 1037.9 1173.5 1851.4 1528.2 1454.7 True False 924.197580263116 1151.0460915954443 1170.017868298423 1123.0647404950118 1284.8105555160128 1023.8449488572344 1226.4729952047908 1339.8472186930267 1432.0608560782803 1182.9785586190058 1093.4578423224511 0.8452064126223334 1.0526661815792353 1.0700164405180561 1.0270763965711536 1.1749977967025576 0.9363369205735793 1.1216463476999003 1.2253304762506951 1.3096626140031635 1.0818693806305482 1.0 10.09468188379087 -7.98029127164073 21.12814729093916 1.1570689389056874 1.029234771075768 0.2706522926592402 0.10627162172652674 55.748589470155366 59761.8019882876 0.020870390447414164 0.028832167006161685 1.046426497696031e-08 7.98029127164073 -0.1278341678299193 S(ph)VSGFLHFDTATK ddPTM_A549_MK2206_60min_R1 3 SVSGFLHFDTATK 13 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 S(0.884)VS(0.116)GFLHFDTATK;S(0.856)VS(0.144)GFLHFDTATK;S(0.519)VS(0.481)GFLHFDTATK 86.37799999999999 6.9954e-05 9633800.0 3074.34 3091.62 2636.4700000000003 2860.77 5088.599999999999 3204.04 3610.6600000000003 4250.5 6626.8 4236.7 4244.900000000001 True False 3593.2134316034458 3248.9702526233077 3010.361090302275 3561.6587784248445 4340.073680827661 3543.089386130379 4266.670184859938 4853.021391610314 5125.840380825079 3279.626527484059 3190.7741767199923 1.1261258969123122 1.0182388576189176 0.9434578956624327 1.116236556134508 1.3601945610858333 1.1104168424017253 1.3371896438142576 1.5209542019670772 1.6064566456076403 1.0278466434297784 1.0 11.639690791851935 -6.612250964916396 4.40170874154367 1.304950436441169 1.0278203958755094 0.26846763939264373 0.1826395989065282 0.25505379094298347 9.007163821685841 0.03395099889479976 0.07297350110786105 2.4420189800738727e-07 6.612250964916396 -0.2771300405656596 S(ph)VSGFLHFDTATK ddPTM_A549_PD325901_60min_R1 2 SVSGFLHFDTATK 13 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 S(0.956)VS(0.044)GFLHFDTATK;S(0.949)VS(0.051)GFLHFDTATK 115.04 5.854e-06 17289700.0 3468.6 3489.6 3868.0 4394.5 4923.4 4016.2 4177.0 4270.1 4970.9 4690.8 4398.4 True False 3820.729718551641 3783.680838752266 4130.505740173534 4665.938284366379 4577.597368807931 3983.493398766866 4335.958020742105 4184.929505671356 4761.990359770396 4394.622087463064 3857.4246837548376 0.9904871855676836 0.980882622203063 1.0707936197869916 1.209599322578226 1.1866977955748637 1.0326820937147403 1.1240551342460587 1.0849024540377348 1.2344998931087487 1.1392632255324597 1.0 11.913422273101865 -5.891658555862656 4.18305713302258 1.1178401493727719 0.9863218609348791 0.38762687738613444 0.06729211367514473 0.23001127237560165 7.192077594773998 0.0125302737093734 0.042652114085416526 1.2833391527402517e-06 5.891658555862656 -0.13151828843789282 S(ph)VSGKTPGDFYDRR ddPTM_A549_MK2206_60min_R1 1 SVSGKTPGDFYDRR 14 2 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;H0Y7U8;A0A2R8Y4Z5 Q3V6T2 CCDC88A Girdin 1 S(0.545)VS(0.451)GKT(0.004)PGDFYDRR 79.837 0.00011428 9999900.0 1599.2 2119.5 2176.6 1600.7 2441.4 1527.5 1524.5 1578.0 2530.2 2543.6 3167.3 True False 1869.105863313828 2227.3734968835442 2485.2746092889092 1992.8715718581527 2082.273294103025 1689.1390361275621 1801.4819165523688 1801.6863324223216 1957.1137398991384 1968.9989933930776 2380.7719969670015 0.7850839415513062 0.9355677484954963 1.0438944226725781 0.8370694776303582 0.8746210459278542 0.7094921472024414 0.7566797319723927 0.7567655931427245 0.8220500503166263 0.8270422349983516 1.0 11.217213747103385 -4.291245762307337 16.518858447861433 0.8795369617430739 0.8600213438199358 0.0 0.10468810047874512 0.0 0.0 0.015684178404008754 0.0 5.113923625222746e-05 4.291245762307337 -0.019515617923138162 S(ph)VSGKTPGDFYDRR ddPTM_A549_PD325901_60min_R1 3 SVSGKTPGDFYDRR 14 2 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;H0Y7U8;A0A2R8Y4Z5 Q3V6T2 CCDC88A Girdin 1 S(0.498)VS(0.479)GKT(0.021)PGDFY(0.002)DRR;S(0.501)VS(0.454)GKT(0.044)PGDFYDRR;S(0.343)VS(0.313)GKT(0.343)PGDFY(0.002)DRR 52.453 0.0059197 23995100.0 8302.1 7726.8 8487.1 9372.4 10231.400000000001 10679.2 9638.5 11583.8 10905.9 11400.2 12693.699999999999 True False 9144.923080317007 8377.964553206955 9063.085643078284 9951.311861735216 9512.781760413838 10592.232135877472 10005.29839188958 11352.7520216847 10447.562949288853 10680.389426429694 11132.455371994089 0.8214650564261757 0.7525711330748647 0.8141138087001258 0.8939008986974899 0.8545088610321437 0.9514731280687946 0.8987503706558666 1.0197886847356974 0.9384778649615593 0.9593920720579167 1.0 13.442484207837621 -6.676098409514045 0.515272001600402 0.9785946600456346 0.7519661082570305 0.7854550560396607 0.03678912692753922 0.4449751589257904 0.17397481075854085 0.00796918446258529 0.047342923146195225 2.1081503967690954e-07 6.676098409514045 -0.22662855178860408 S(ph)VSGS(ph)PEPAAK ddPTM_A549_MK2206_60min_R1 2 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.975)VS(0.122)GS(0.904)PEPAAK;S(0.994)VS(0.07)GS(0.936)PEPAAK 133.98 7.015500000000001e-08 32330000.0 6189.1 7061.6 6540.2 6325.0 9898.5 7730.900000000001 6836.799999999999 7486.2 10750.1 10809.9 11695.7 True False 7233.668771032774 7421.005277467719 7467.698704250359 7874.625283940044 8442.443762463658 8548.97870664391 8078.958063027376 8547.391775525972 8315.219514382155 8367.936082198397 8791.334905101177 0.8228180190059001 0.8441272409223856 0.8494385420258784 0.8957257764541297 0.960314201835824 0.9724323778955752 0.9189682966507801 0.9722518670704198 0.9458426512175352 0.9518390747852067 1.0 13.10186653020683 -2.1679279037787094 0.23229455854434208 0.9896278218921742 8.340433651869147e-15 0.8175653886958887 0.024414157153607542 11.796114638785514 0.14998839288843316 0.01395304791538314 4.449692508715541 0.0067931639499892674 2.1679279037787094 -0.9896278218921659 S(ph)VSGS(ph)PEPAAK ddPTM_A549_PD325901_60min_R1 2 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.999)VS(0.15)GS(0.85)PEPAAK;S(0.975)VS(0.027)GS(0.997)PEPAAK 139.19 1.4592000000000001e-08 57131000.0 12262.9 11908.5 13291.8 12827.3 16515.6 13626.7 14111.0 14182.5 16299.800000000001 15278.2 16945.4 True False 13507.820580530155 12912.071087884391 14193.861478086495 13619.613188088018 15355.601231726909 13515.728673117985 14648.001826835492 13899.61891154398 15614.776090081376 14313.53184460608 14861.223225741005 0.9089306025047365 0.8688430886038706 0.9550937538910944 0.9164530389731039 1.0332663064457301 0.9094627318232795 0.9856525000892125 0.9352944034558718 1.0507059784308432 0.9631462785522074 1.0 13.85926524839235 -6.644917559649459 0.40096111964476877 1.0227102313920449 0.8660451105054995 0.26705982920262883 0.04600651558722758 1.323963086630897 0.28858992397296496 0.012963028800852889 0.08433274204707104 2.2650742365917865e-07 6.644917559649459 -0.15666512088654538 S(ph)VSHGSNHTQKPDEQR ddPTM_A549_MK2206_60min_R1 1 SVSHGSNHTQKPDEQR 16 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.445)VS(0.445)HGS(0.109)NHT(0.001)QKPDEQR 44.382 0.022747999999999997 2969300.0 330.75 281.7 223.45 166.41 400.58 368.61 168.18 178.69 233.89 445.01 509.99 True False 386.57251393887486 296.0373267620167 255.1385699924686 207.1804574704288 341.65521264511716 407.6160655364849 198.73612904281896 204.01985471517415 180.91428844558124 344.48193192713245 383.3454079920444 1.0084182720845256 0.7722469621135004 0.6655579137594979 0.5404537348070397 0.891246394301944 1.0633127645158702 0.5184257458144467 0.5322089438447328 0.4719354521375557 0.8986202123341505 1.0 8.582501088004209 -11.109848448914107 1.4842617356581058 0.9984659337100478 0.684154595115393 0.14937832282962826 0.19628857841670927 0.4894554943461175 1.943846992441839 0.14899248505570228 0.033050640731395325 7.76518042525087e-12 11.109848448914107 -0.31431133859465477 S(ph)VSHGSNHTQKPDEQR ddPTM_A549_PD325901_60min_R1 2 SVSHGSNHTQKPDEQR 16 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.538)VS(0.457)HGS(0.006)NHTQKPDEQR;S(0.472)VS(0.472)HGS(0.055)NHTQKPDEQR 78.794 0.00015109 11621300.0 1365.04 1341.97 905.6400000000001 1185.6 1302.82 1147.31 1152.68 1049.63 1361.77 1438.38 1595.45 True False 1503.6178559106631 1455.062521544124 967.1021764557288 1258.831819307038 1211.314417685004 1137.9666877494187 1196.5458681706984 1028.6943062311948 1304.5395425827376 1347.560441324533 1399.2197643908369 1.0746116472742056 1.0399099259276106 0.6911724670189786 0.8996669796578252 0.8657070522530539 0.8132866020834425 0.8551522059807565 0.7351913776597104 0.9323335588749926 0.9630799075449065 1.0 10.450406857670126 -9.128996885610817 3.151378872514542 0.9742889908459941 0.8685259941096691 0.12910445279473803 0.10769188898670896 0.3141202819490194 6.4992139637929816 0.02076072076831456 0.02012263324939665 7.430244662146035e-10 9.128996885610817 -0.10576299673632494 S(ph)VSKEREHAK ddPTM_A549_PD325901_60min_R1 1 SVSKEREHAK 10 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 S(0.5)VS(0.5)KEREHAK 43.297 0.014145 39861000.0 5695.2 5283.8 5476.7 5967.3 6478.8 7253.0 6885.3 7577.6 6600.3 6630.3 7071.9 True False 6273.372511415354 5729.084369497713 5848.381796072492 6335.886568278411 6023.75143864663 7193.933972724484 7147.323859280733 7426.458823487799 6322.912344161531 6211.66172646592 6202.10113246768 1.0114914893236056 0.9237328200770947 0.9429678218977299 1.021570985856772 0.9712436656526933 1.1599188434810601 1.1524036300963976 1.1974101461536428 1.0194790779952636 1.0015415088844957 1.0 12.598541335623914 S(ph)VSNGALR ddPTM_A549_PD325901_60min_R1 1 SVSNGALR 8 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 S(0.931)VS(0.069)NGALR 97.28399999999999 0.0024636999999999997 33514000.0 4232.0 4119.9 4739.2 4431.2 4932.3 4920.9 4801.2 4453.2 5032.2 4628.6 5442.3 True False 4661.629524566263 4467.098431790307 5060.8306111247175 4704.9051600146295 4585.8722635112645 4880.825821919194 4983.912293317451 4364.37743253218 4820.714133946889 4336.349406078184 4772.931601582155 0.9766805631618528 0.9359234124179636 1.0603191148700157 0.9857474509911318 0.9608082927463525 1.0226054402919316 1.0442035858350367 0.9144018387117583 1.0100111496148185 0.9085295512386453 1.0 12.220659946682776 -5.716168928008425 24.999997406385237 1.0012038742949418 0.9563019747053776 0.024113521383495096 0.04739107979736507 161.10688197394555 88966.87721626672 0.004810675824305193 0.018631513842969162 1.922343847239673e-06 5.716168928008425 -0.044901899589564254 S(ph)VSPCSNVESR ddPTM_A549_MK2206_60min_R1 2 SVSPCSNVESR 11 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.917)VS(0.083)PCS(0.001)NVESR;S(0.999)VS(0.001)PCSNVESR 181.98 1.5734000000000002e-18 19021300.0 2085.6000000000004 2509.2 2319.3 2091.7 3697.6 3152.5 2443.5 2349.6 3954.3 3185.3999999999996 3261.6 True False 2437.598291975563 2636.907562340263 2648.211615052728 2604.1665938999795 3153.6879381811004 3486.095457539864 2887.452320823689 2682.662995348219 3058.657363719535 2465.8159276436186 2451.654704419403 0.9942665611032003 1.0755623773555547 1.0801731623458262 1.0622077363527807 1.2863507787194493 1.4219357445629504 1.1777565232243792 1.0942254594467955 1.2475889684652315 1.005776189933553 1.0 11.25954008616193 -6.569190623747045 24.98722558265048 1.1562941693159265 1.055661764520516 0.19089286464495236 0.11754218175239942 217.02226478719282 117092.1376592441 0.019562720750416946 0.04072306939650054 2.6965555805260294e-07 6.569190623747045 -0.10063240479541058 S(ph)VSPCSNVESR ddPTM_A549_PD325901_60min_R1 2 SVSPCSNVESR 11 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.997)VS(0.003)PCSNVESR;S(0.982)VS(0.018)PCSNVESR 132.14 7.7861e-08 18022000.0 1990.86 1485.24 1676.58 1669.74 1723.32 1602.55 1579.22 1893.38 1259.59 1395.8300000000002 1752.01 True False 2192.9706416063286 1610.4063872502338 1790.3628008945554 1772.876047545321 1602.279948331251 1589.4993641237597 1639.318081282343 1855.6150505721241 1206.6538126422165 1307.6970555861626 1536.5238769064467 1.4272284827890445 1.048084192803133 1.1652033709356826 1.1538226474649602 1.042795346309355 1.0344774904012366 1.0669004926775734 1.207670820129472 0.785314065585253 0.8510749980787857 1.0 10.585454470614684 -2.0000000000022737 0.24236954408566752 0.9043845639663126 3.472784482298652 0.4997467028923793 0.1166109611164388 29.66027442955613 0.3568407444157389 0.0675785013109035 31.226379219767267 0.009999999999947645 2.0000000000022737 2.5683999183323394 S(ph)VSPLLSTHVLGK ddPTM_A549_MK2206_60min_R1 2 SVSPLLSTHVLGK 13 0 X6RL08;X6R907;Q96H12-2;Q96H12 X6RL08 MSANTD3 Myb/SANT-like DNA-binding domain-containing protein 3 1 S(0.5)VS(0.5)PLLSTHVLGK;S(0.499)VS(0.499)PLLS(0.001)T(0.001)HVLGK 75.764 8.748299999999999e-05 1464100.0 251.05 662.11 500.41 540.74 673.37 330.95 480.78 441.03 642.3 508.55 699.2 True False 293.42110241679376 695.8085708995343 571.3756626087769 673.2213242747406 574.3181650078452 365.9709093331697 568.1315026828784 503.5473530977289 496.8200755423356 393.6682017966859 525.5693430617017 0.5582918910518458 1.3239139232248684 1.087155615432648 1.2809372029823751 1.0927543103297417 0.6963322997517472 1.0809829572121368 0.9580987927574242 0.945298811852519 0.7490318965398051 1.0 9.037737314173981 -7.064251757892196 24.998697925683036 0.9609957833207902 1.0959825518289787 0.09060784964673851 0.21458174598049914 365.9800641014247 142392.44804212282 0.027222454621823596 0.04715070131792951 8.62478429278765e-08 7.064251757892196 0.13498676850818858 S(ph)VSPLLSTHVLGK ddPTM_A549_PD325901_60min_R1 1 SVSPLLSTHVLGK 13 0 X6RL08;X6R907;Q96H12-2;Q96H12 X6RL08 MSANTD3 Myb/SANT-like DNA-binding domain-containing protein 3 1 S(0.57)VS(0.426)PLLS(0.004)THVLGK 95.98100000000001 5.1591e-05 2531500.0 925.08 1004.1 1097.8 1229.4 1344.2 1324.8 1505.8 1457.1 1332.1 1256.0 1503.7 True False 1018.9934405920975 1088.7190308892561 1172.303309607679 1305.3372458300198 1249.7880292382547 1314.0112680360398 1563.1040430053774 1428.0369974271625 1276.1164695025336 1176.6959456496998 1318.7544327396674 0.7726938505716893 0.8255661583843774 0.8889473889177827 0.9898258640300652 0.9477033769220117 0.9964032995181872 1.1852881811802385 1.082868016951772 0.9676680038537918 0.8922782865686024 1.0 10.36496022783227 -5.922586987977557 1.177003453960408 1.0073826302325444 0.7592477061446107 0.5818149639752108 0.07101529596780846 0.35924776680075826 0.7620747900188353 0.010386249168864613 0.0813321580433761 1.1951241216589486e-06 5.922586987977557 -0.2481349240879337 S(ph)VSPPK ddPTM_A549_MK2206_60min_R1 2 SVSPPK 6 0 O95696-2 O95696-2 BRD1 Bromodomain-containing protein 1 1 S(0.975)VS(0.025)PPK;S(0.996)VS(0.004)PPK 86.95299999999999 0.039055 22093000.0 4357.8 5027.1 4995.9 3818.7 6505.6 5253.6 4868.9 4476.1 7364.7 7098.4 7182.0 True False 5093.29010201913 5282.9579175198205 5704.393742785289 4754.281671427956 5548.634857916209 5809.532464942562 5753.516105937574 5110.60088248134 5696.607209009241 5494.866509947092 5398.511186883788 0.943461989000556 0.9785953450194351 1.056660539417733 0.8806653365800092 1.0278083467525567 1.076136042666243 1.0657597820518194 0.9466685731610681 1.0552181910541756 1.0178484992857677 1.0 12.398345877225404 S(ph)VSPPK ddPTM_A549_PD325901_60min_R1 1 SVSPPK 6 0 O95696-2 O95696-2 BRD1 Bromodomain-containing protein 1 1 S(0.72)VS(0.28)PPK 70.525 0.050371 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)VSPPPK ddPTM_A549_MK2206_60min_R1 2 SVSPPPK 7 0 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.928)VS(0.072)PPPK;S(0.901)VS(0.099)PPPK 103.56 0.010342 74527000.0 7673.5 8659.4 7967.700000000001 6570.299999999999 10442.4 7206.6 7983.9 7462.5 11190.7 10627.0 11392.7 True False 8968.599200937131 9100.126472712125 9097.639669406988 8180.023794951971 8906.336792963633 7969.197628646083 9434.47128472448 8520.332227947765 8656.024317875783 8226.353319227957 8563.578167475758 1.047295771176543 1.062654686480724 1.0623642934631672 0.9552109684733752 1.040025164573106 0.9305920344036659 1.1016973396186596 0.9949500152059988 1.0107952713914765 0.9606210346127777 1.0 13.063998016550917 -6.2122174235136915 24.93568264522232 1.0058750941787977 1.0579599377474769 0.25132591717309916 0.04365536599991946 369.82420804134205 187351.14512834605 0.00506132724018404 0.013390994664824398 6.134548106254943e-07 6.2122174235136915 0.05208484356867915 S(ph)VSPPPK ddPTM_A549_PD325901_60min_R1 2 SVSPPPK 7 0 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.883)VS(0.117)PPPK;S(0.748)VS(0.252)PPPK 91.069 0.01245 39643000.0 12437.2 12408.0 12763.0 12183.3 16081.300000000001 13795.8 12894.8 14056.099999999999 16088.5 14316.1 14472.599999999999 True False 13699.81538821727 13453.665705879781 13629.173930153771 12935.834770718135 14951.804965473246 13683.451578782902 13385.518670305315 13775.74005870286 15412.356294265826 13412.179002799088 12692.561949370285 1.0793577721239294 1.0599645492805538 1.07379219298039 1.019166565608917 1.177997399194498 1.0780685281163256 1.054595496456837 1.0853395960290204 1.214282534585579 1.0566959654244197 1.0 13.631695681084874 -6.7145703845934905 24.99981387083324 1.1012136827316867 1.0593286665311152 0.08312949876265785 0.057280088019809 315.766913393338 168427.80107030374 0.011362625637367002 0.023653152251561095 1.9294326144282756e-07 6.7145703845934905 -0.0418850162005715 S(ph)VSPPPKR ddPTM_A549_MK2206_60min_R1 1 SVSPPPKR 8 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.856)VS(0.144)PPPKR 65.347 0.0037614000000000002 36734000.0 10623.0 10891.0 9370.6 8443.6 11658.0 9460.0 9673.4 10397.0 13693.0 12971.0 14068.0 True False 12415.902692585536 11445.30538077786 10699.491984656197 10512.28237904761 9943.123643259218 10461.050920960222 11430.931565482246 11870.806589477112 10591.557363227776 10040.842091249258 10574.527342951971 1.174133111572203 1.0823467574090933 1.011817515587353 0.9941136883110102 0.9402901255805451 0.9892688894442755 1.0809874706221339 1.1225850768062104 1.0016104757899327 0.9495310537866811 1.0 13.368305559186052 -5.431292402281939 2.157023113129385 1.009350530402039 1.189545548587051 0.49786422237914163 0.049726004086298944 0.2899219588434017 1.9410034497022817 0.006916718591691149 0.08693161200251208 3.704312334426084e-06 5.431292402281939 0.18019501818501205 S(ph)VSPPPKR ddPTM_A549_PD325901_60min_R1 3 SVSPPPKR 8 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.999)VS(0.001)PPPKR;S(0.998)VS(0.002)PPPKR;S(0.998)VS(0.002)PPPKR 105.4 0.00083118 130677000.0 18854.0 19182.1 19910.3 19648.8 22987.0 19971.4 19806.1 21261.0 21217.0 22284.0 21468.0 True False 20768.044200418775 20798.64288658581 21261.532688360156 20862.46175033747 21372.472420844926 19808.75953989657 20559.83197381379 20836.93267606817 20325.323274104994 20876.98443698878 18827.57209686451 1.10306544537824 1.1046906515391623 1.1292763920368145 1.1080803006890008 1.135168799826518 1.0521143904261274 1.0920065459336503 1.1067243598306704 1.079550946321428 1.108851652755884 1.0 14.200559349249339 -10.71780083217818 0.3013034873916173 0.9524310240892022 1.1164331605067102 0.0 0.03809172023018839 1.164914189134512 0.13522709070794514 0.06630410202213015 0.009849503179493964 1.9151340057587297e-11 10.71780083217818 0.16400213641750794 S(ph)VSPYSR ddPTM_A549_PD325901_60min_R1 1 SVSPYSR 7 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.985)VS(0.014)PYSR 63.076 0.026801 9894300.0 5487.7 5419.5 4539.3 5498.6 5227.7 5561.1 5470.4 5315.8 5672.6 6024.5 6523.3 True False 6044.8072641687795 5876.220284736901 4847.364195028366 5838.236033773345 4860.524386585939 5515.8122453768265 5678.579065517737 5209.772198835574 5434.200348997879 5644.112041852399 5720.975454605755 1.0566042997619085 1.02713607694404 0.8472967999060239 1.0204966058844367 0.8495971404094914 0.9641384216980412 0.9925893076409048 0.910644039670083 0.9498730403786292 0.9865646316151425 1.0 12.482045439277835 -10.653970740117664 0.9882870218237224 0.9992867311828973 0.9550752731899398 0.040692187754952425 0.06478748322219864 1.2854831893821685 2.289666983402426 0.038299605450371324 0.010931818627673501 2.218345872200378e-11 10.653970740117664 -0.04421145799295756 S(ph)VSQDLIK ddPTM_A549_MK2206_60min_R1 2 SVSQDLIK 8 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.989)VS(0.011)QDLIK;S(0.997)VS(0.003)QDLIK 110.08 0.0016225999999999999 36833000.0 8545.8 8154.799999999999 7801.7 6036.9 8513.6 7695.299999999999 6335.6 7671.1 9428.1 8404.5 9162.099999999999 True False 9988.12211524969 8569.844488032992 8908.098373283701 7515.94077100674 7261.260717897725 8509.611538273273 7486.696510665258 8758.50191675848 7292.650403581962 6505.917612821245 6886.897708903912 1.4503078944146761 1.2443693590734237 1.2934849259873027 1.0913391034238178 1.0543587294043597 1.2356233383968216 1.0870927414800833 1.2717630327854026 1.058916614102379 0.9446804479773082 1.0 12.749638533500578 -2.0000000000000004 0.19754973462743836 0.9993773323906836 2.7942878117105208 0.6177867478426848 0.08953699583105416 23.277073870427902 0.2570828842279205 0.07084451040740243 13.047464231372068 0.00999999999999999 2.0000000000000004 1.7949104793198372 S(ph)VSQDLIK ddPTM_A549_PD325901_60min_R1 2 SVSQDLIK 8 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.998)VS(0.002)QDLIK;S(0.999)VS(0.001)QDLIK 99.215 0.0024151999999999997 29588000.0 6624.1 6825.0 6793.5 6535.8 7342.700000000001 7138.8 7187.2 7851.900000000001 7758.3 8719.2 9123.5 True False 7296.573755595318 7400.166702339586 7254.54776263415 6939.501522121236 6826.974082939835 7080.663979661594 7460.712828986743 7695.287694803607 7432.245631215005 8168.668223972024 8001.3673386316095 0.9119158572268693 0.9248627627193978 0.9066635058245957 0.8672894554679984 0.8532259292706565 0.8849317472871487 0.9324297352235639 0.9617465826934091 0.9288719435903395 1.0209090369508051 1.0 12.966030845174835 -9.729971282826748 0.39198611046310905 1.0075326626559515 0.8921228344723651 0.70700541110488 0.026722805279451915 0.6551543604874935 0.21374083666236332 0.030152533411089033 0.01158998223276755 1.862210268890257e-10 9.729971282826748 -0.11540982818358647 S(ph)VSQDLIKK ddPTM_A549_MK2206_60min_R1 1 SVSQDLIKK 9 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.979)VS(0.021)QDLIKK 47.99100000000001 0.013909999999999999 5626700.0 2959.8 3188.4 3020.4 2568.9 3707.5 2411.4 2519.8 2670.6 3182.2 3803.2 3393.2 True False 3459.3418798375847 3350.6759412425063 3448.7381374144175 3198.2806153223037 3162.1316612955507 2666.5727474422292 2977.615043180491 3049.165728369489 2461.43678092919 2944.054478562884 2550.574792444174 1.3562989370417773 1.3136944469021465 1.352141543792781 1.253945042034013 1.239772176320041 1.045479142717825 1.1674290250187453 1.195481793908707 0.9650517946860266 1.1542709852243325 1.0 11.316606691260983 -7.34574156444513 0.48386748858637635 0.9767076777892918 1.382381388163285 0.6067213440911448 0.08133227723913339 0.32800385024320006 0.14346810927861745 0.01767310368343753 0.05475168936715259 4.510850518077445e-08 7.34574156444513 0.40567371037399313 S(ph)VSQDLIKKEEER ddPTM_A549_PD325901_60min_R1 2 SVSQDLIKKEEER 13 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.977)VS(0.023)QDLIKKEEER;S(0.981)VS(0.019)QDLIKKEEER 88.28299999999999 3.9331999999999995e-05 23791000.0 2607.3 3342.9 3034.7 3518.5 4085.0 4923.3 4533.2 5101.6 5505.3 5744.799999999999 5960.0 True False 2871.9911766071878 3624.617914908572 3240.6529911335642 3735.829753906725 3798.0836924849514 4883.20627711491 4705.71340666222 4999.844585872225 5273.931386196454 5382.0723475863 5226.957783552845 0.5494575038742804 0.6934469465802462 0.6199883613620544 0.7147235368270801 0.7266337035351631 0.9342348798913999 0.9002776761406466 0.9565496399463461 1.0089867958741539 1.0296758784854811 1.0 12.351755791825799 -7.161278824343104 0.7869400877623798 1.0050746251497247 0.6038533951295683 0.9368065299909782 0.04137961650137973 0.095282530433033 0.11372265338776912 0.006685104780442122 0.01882774978054493 6.897968005297118e-08 7.161278824343104 -0.4012212300201564 S(ph)VSSSPWLPQDGFDPSDYAEPMDAVVKPR ddPTM_A549_PD325901_60min_R1 2 SVSSSPWLPQDGFDPSDYAEPMDAVVKPR 29 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 S(0.589)VS(0.127)S(0.137)S(0.147)PWLPQDGFDPSDYAEPMDAVVKPR;S(0.575)VS(0.144)S(0.144)S(0.135)PWLPQDGFDPSDYAEPMDAVVKPR 55.033 0.0011819 7600600.0 1045.31 1279.75 1383.42 1252.9299999999998 1250.4499999999998 1335.1100000000001 1153.9299999999998 1356.97 1672.58 1966.5700000000002 2273.3 True False 1151.4291016834497 1387.599023783016 1477.3072003802654 1330.320640489512 1162.6227058183122 1324.2373068143106 1197.8434376047244 1329.9041688276286 1602.2872791536277 1842.400434583065 1993.6985116360213 0.577534213404509 0.695992405915154 0.7409882646539134 0.6672626942966697 0.5831487052996135 0.6642114136543377 0.6008147323246877 0.6670538002941651 0.803675816479793 0.924111857349584 1.0 10.961231545625335 -9.44166328020914 0.7412801827885991 0.9735314658467734 0.6460413835372505 0.8258030938152247 0.05485373980483422 0.15467698458325863 0.18444062867853056 0.020606467420083565 0.013611060873655436 3.6169018174757563e-10 9.44166328020914 -0.3274900823095229 S(ph)VSSSS(ph)YRR ddPTM_A549_MK2206_60min_R1 1 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(0.969)VS(0.019)S(0.017)S(0.029)S(0.964)Y(0.002)RR 64.266 0.010413 25459000.0 2086.0 1767.9 1734.7 1433.3 2652.1 1723.9 2199.9 1988.4 3078.5 2560.2 2789.4 True False 2438.065802196501 1857.878558688567 1980.7065444884101 1784.4585643432815 2261.979603215627 1906.3219537677937 2599.593354033164 2270.2617892196113 2381.2246653543193 1981.8490418638778 2096.7149964764176 1.1628026728924685 0.8860901752554728 0.9446713300649051 0.8510734970380377 1.0788207300548431 0.9091946005877841 1.2398410649047897 1.0827708072078672 1.1356930576430404 0.9452162288124162 1.0 11.033915055913504 -7.7076967302899435 24.999999350869235 1.0793895788288812 0.9663006787167081 0.1998243587508991 0.10784899165622389 109.70542009673579 51032.297022136576 0.015443431057082764 0.022906301437722147 1.9602130208968786e-08 7.7076967302899435 -0.1130889001121731 S(ph)VSSSS(ph)YRR ddPTM_A549_PD325901_60min_R1 3 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(0.889)VS(0.036)S(0.204)S(0.156)S(0.672)Y(0.044)RR;S(0.92)VS(0.094)S(0.144)S(0.124)S(0.713)Y(0.005)RR;S(0.844)VS(0.128)S(0.088)S(0.09)S(0.777)Y(0.073)RR 54.7 0.021823 113266000.0 5915.5 5970.7 6518.2 6065.4 6152.799999999999 5593.8 6149.9 6783.400000000001 5939.2 6870.5 6468.0 True False 6516.037205239063 6473.871843173472 6960.564249120762 6440.045982477147 5720.648554007687 5548.245947418477 6383.937809854407 6648.099765525649 5689.5960781243475 6436.6954574731335 5672.477004030169 1.1487110834666343 1.1412777590061502 1.2270766799363726 1.1353146038144601 1.008492154299311 0.9780993282963635 1.12542330366765 1.1719923696124852 1.0030179186415416 1.1347239403350606 1.0 12.469763139949936 -6.243268742933709 0.2436604552366111 0.9832619728014089 1.2713055117925367 0.04519685056723699 0.07855081050893566 4.619292637195326 0.3230255790071998 0.05332171063495271 0.3913616985687427 5.711251130988343e-07 6.243268742933709 0.2880435389911278 S(ph)VSSSSYR ddPTM_A549_MK2206_60min_R1 6 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.999)VSS(0.001)SSYR;S(0.964)VS(0.033)S(0.003)SSYR;S(0.996)VS(0.003)SSSYR;S(0.952)VS(0.017)S(0.005)S(0.007)S(0.017)Y(0.002)R;S(0.999)VS(0.001)SSSYR;S(0.993)VS(0.004)S(0.001)S(0.001)SYR 143.21 0.00097204 2790340400.0 18111.6 18764.5 17359.800000000003 16781.3 22771.0 18237.999999999996 16996.4 17558.0 27100.7 27603.3 28584.5 True False 21168.395293893653 19719.532900340302 19821.680677356264 20892.71925334118 19421.41606456129 20167.93305459539 20084.42587503489 20046.900269119866 20962.43472092507 21367.695358675563 21486.179757933667 0.9852098200973733 0.9177775259493937 0.9225316413001341 0.972379431277291 0.9039027078506139 0.9386467618632148 0.9347602087159683 0.9330137090432582 0.9756240968422873 0.9944855530116118 1.0 14.39112137398465 -8.980586739096067 1.7349949695145883 0.9916320487758891 0.9367928722939609 0.5087786071356619 0.022533775767252216 0.17568008877299116 1.062926180516783 0.004268120372168924 0.004245640802714829 1.045714815102983e-09 8.980586739096067 -0.054839176481928154 S(ph)VSSSSYR ddPTM_A549_PD325901_60min_R1 4 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.99)VS(0.009)S(0.001)SSYR;S(0.995)VS(0.003)S(0.003)SSYR;S(0.997)VS(0.002)SSSYR;S(0.955)VS(0.043)S(0.002)SSYR 139.98 0.0010649000000000001 3433951000.0 20826.7 19569.6 19405.2 19178.0 21264.3 17899.9 20043.5 19926.9 20014.3 20448.500000000004 23485.3 True False 22941.01125219379 21218.79887151717 20722.15356494711 20362.581503601858 19770.76892585256 17754.12914909292 20806.26636072406 19529.442347149372 19173.16857260308 19157.378220237162 20596.75698558282 1.1138166687237165 1.0302009625287012 1.0060881710383858 0.9886304682749387 0.9598971789438294 0.8619866302991456 1.0101719593666076 0.9481804519429666 0.9308828853990844 0.9301162427486432 1.0 14.330129578650503 -5.231926436967902 0.9752936658314727 0.9609607424273185 1.1977257474511294 0.6138324575639572 0.03873415533690666 1.1573323881477335 0.8017069989754203 0.006166034620088466 0.29115679747893464 5.8623745601874645e-06 5.231926436967902 0.23676500502381082 S(ph)VSSSSYRR ddPTM_A549_MK2206_60min_R1 2 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.997)VS(0.003)SSSYRR;S(0.962)VS(0.038)S(0.001)SSYRR 133.42 1.9674000000000002e-05 80793000.0 2107.9 3768.7 3778.1000000000004 3504.3999999999996 5299.4 2570.7 2688.8 2038.58 7122.200000000001 7076.299999999999 7450.0 True False 2463.6619867929057 3960.5107325808017 4313.89139086393 4362.978157318492 4519.865280072731 2842.729767707445 3177.320155609061 2327.554957889416 5509.033071816319 5477.75891529621 5599.959390460063 0.43994283083372576 0.7072391880783669 0.7703433346700614 0.7791088922450298 0.8071246530417077 0.5076339968733061 0.5673827137071488 0.41563782799114124 0.9837630396394224 0.9781783283335892 1.0 12.45120064979763 -8.791262638714327 22.52749182391328 0.9923329617185765 0.6374025695108662 0.6115820355495962 0.12851667069386064 33.426908763459714 25249.294563702384 0.023048238448250352 0.024539768806760023 1.6171018028177296e-09 8.791262638714327 -0.3549303922077104 S(ph)VSSSSYRR ddPTM_A549_PD325901_60min_R1 2 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.59)VS(0.389)S(0.02)S(0.001)SYRR;S(0.994)VS(0.005)SSSYRR 101.79 0.00030083 169329000.0 4113.6 5112.799999999999 5064.0 6500.299999999999 5311.4 9887.5 7582.7 8604.599999999999 6713.5 6574.8 8486.7 True False 4531.209643727737 5543.673599373161 5407.673492305785 6901.808767747579 4938.345587335262 9806.979478190178 7871.2637979126475 8432.974502821884 6431.354941825131 6159.666005937616 7442.889701623814 0.6087970970118183 0.7448281274628722 0.7265556402274769 0.9273023038675169 0.6634984240405798 1.3176306342482262 1.0575548091483036 1.1330242474212755 0.8640938129745499 0.8275906607340645 1.0 12.861647141048975 -6.409980428104967 1.2057727655946513 0.9770171552687508 0.6682911260000387 0.40780951925766606 0.15832749693898032 0.42386402837065107 1.1325323898315467 0.023871596094826347 0.0958100148114513 3.890626780798595e-07 6.409980428104967 -0.30872602926871207 S(ph)VSTLKPCAK ddPTM_A549_MK2206_60min_R1 2 SVSTLKPCAK 10 1 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1 A0A286YFF8 MON2 Protein MON2 homolog 1 S(0.992)VS(0.007)T(0.002)LKPCAK;S(0.999)VSTLKPCAK 74.46 0.00044992 17239600.0 6954.799999999999 6884.9 7677.5 6521.799999999999 8896.2 7079.4 6504.8 6720.7 9615.9 8387.6 9582.6 True False 8128.600211465109 7235.312002214444 8766.28494570229 8119.641292774728 7587.580764724878 7828.537409074603 7686.637960504986 7673.379806280544 7437.914003436929 6492.835334558805 7202.975953694309 1.1285058097821443 1.0044892623171329 1.217036541848537 1.1272620296073976 1.053395265165825 1.0868476390039108 1.0671475248452846 1.0653068753262978 1.032616803284221 0.9014101083079025 1.0 12.814377372688366 -8.392985383911661 0.5197721736234314 1.0041993969791585 1.1136946749988477 0.4511383260829136 0.05792744412362467 0.5571613788887021 0.3384533574554738 0.015572872771852231 0.01992369991599816 4.045895078420774e-09 8.392985383911661 0.10949527801968917 S(ph)VSTLKPCAK ddPTM_A549_PD325901_60min_R1 1 SVSTLKPCAK 10 1 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1 A0A286YFF8 MON2 Protein MON2 homolog 1 S(0.997)VS(0.002)TLKPCAK 69.602 0.00098272 15534000.0 4813.2 5123.0 5529.5 5167.7 5163.5 5360.4 5625.2 5487.6 5079.4 5352.1 5386.7 True False 5301.832520709432 5554.733189170067 5904.765121584684 5486.897092301766 4800.833573107966 5316.746679634953 5839.2700642275495 5378.145513061078 4865.930482089311 5014.167492604901 4724.170049104717 1.122278086013053 1.1758114401963051 1.2499052871104213 1.161452072061122 1.0162279348978511 1.1254350762929324 1.2360414641158306 1.1384318212847349 1.0300074788822344 1.0613859028116783 1.0 12.205845180934976 -8.768674822085247 3.8661267821613667 1.012961246977459 1.1557310965544492 0.449153295334193 0.06015062838167416 0.1265109950344465 4.071473876173691 0.010826802148669346 0.011784806174398248 1.7034334765266733e-09 8.768674822085247 0.14276984957699024 S(ph)VSTMNLSK ddPTM_A549_PD325901_60min_R1 4 SVSTMNLSK 9 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 S(0.508)VS(0.379)T(0.098)MNLS(0.015)K;S(0.901)VS(0.088)T(0.01)MNLS(0.001)K;S(0.861)VS(0.067)T(0.065)MNLS(0.007)K;S(0.992)VS(0.006)T(0.002)MNLSK 91.12299999999999 0.0010423 24385800.0 11961.9 12235.7 13009.800000000001 13760.3 15233.699999999999 14305.1 13565.0 14703.5 15520.1 13966.6 15687.5 True False 13176.263282114644 13266.845380192892 13892.723262282745 14610.242479091288 14163.73746541198 14188.60400844079 14081.223498052816 14410.227157827392 14867.84416960159 13084.746492445127 13758.036951255917 0.9577139041563509 0.964297844757701 1.0097896459723152 1.0619423781790016 1.0294882558895169 1.0312956752994888 1.0234907456595685 1.047404306943073 1.0806661024590694 0.9510620256947828 1.0 13.747987015089134 -5.877654097157518 3.0778307567391 1.0386544199355592 0.9591073351050499 0.3449271041063323 0.03301237431101223 0.14840623179514312 2.7576863658101267 0.004070732419840879 0.015600737576661758 1.3253967546321933e-06 5.877654097157518 -0.07954708483050932 S(ph)VSVATGLNMMK ddPTM_A549_MK2206_60min_R1 1 SVSVATGLNMMK 12 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 S(0.798)VS(0.052)VAT(0.15)GLNMMK 203.39 7.444399999999999e-25 9793700.0 5350.6 5474.5 4868.4 5348.8 7506.3 6085.4 5593.2 6004.1 8564.2 7262.5 8190.2 True False 6253.650470389551 5753.128666519915 5558.812325582159 6659.256240116757 6402.1332135354805 6729.352988838409 6609.412040446511 6855.199561785086 6624.422374217136 5621.896205974697 6156.347301979331 1.0158053409980519 0.9345035918734187 0.9029400150629809 1.0816895008466685 1.0399239840606664 1.0930755947889508 1.07359310906997 1.113517354614004 1.0760312973388155 0.91318698088511 1.0 12.587858906307085 -6.267086823359635 24.99848303031586 1.0516798581246536 0.9494250425653846 0.3642810664957805 0.057438018868322 291.1171141538239 1288636.6614890639 0.006590222219354648 0.015735904650570554 5.4064622713448e-07 6.267086823359635 -0.10225481555926896 S(ph)VSVDESRPELIFR ddPTM_A549_MK2206_60min_R1 1 SVSVDESRPELIFR 14 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.959)VS(0.031)VDES(0.01)RPELIFR 47.478 0.0088026 17035000.0 335.7 357.76 387.09 413.99 502.57 148.21 345.73 411.71 275.55 311.68 424.58 True False 392.35795292299383 375.9684558834897 441.9851826287071 515.4175685847174 428.64261875045344 163.89348382616433 408.54466579839317 470.071153308995 213.13836496293078 241.271271528839 319.14506818812555 1.229403152461412 1.1780487726724596 1.3849036901556357 1.6149946214456168 1.3430964833139225 0.513539139917257 1.280122134168683 1.472907464864547 0.667841637575589 0.7559924798418552 1.0 8.318068543488808 -7.727415243183234 0.7252670604767435 0.868447372592219 1.339183952714411 0.23190097135798393 0.29523800135685735 0.6640155669819225 0.7050653334889312 0.06590792608470027 0.12701986611617017 1.87320262116393e-08 7.727415243183234 0.4707365801221919 S(ph)VSVDIRRTPEEEFSVGDK ddPTM_A549_MK2206_60min_R1 2 SVSVDIRRTPEEEFSVGDK 19 2 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 S(0.754)VS(0.131)VDIRRT(0.116)PEEEFSVGDK;S(0.854)VS(0.123)VDIRRT(0.022)PEEEFSVGDK 92.01 8.8947e-07 14263000.0 1946.01 2054.21 1722.23 1515.69 2135.5 1752.95 1570.65 1910.83 2721.3999999999996 2965.4 2993.6 True False 2274.4489126234 2158.76051475968 1966.4681109784242 1887.0341180419105 1821.3707788797446 1938.4460054859628 1856.0167741770933 2181.6960041714483 2105.007245182799 2295.5140804402554 2250.2065008431223 1.010773416471419 0.9593610692844508 0.8739056216581078 0.8386048646356963 0.8094238365222487 0.861452495475261 0.824820643563899 0.9695536846747158 0.9354729196605205 1.0201348541034598 1.0 11.135841687914168 -9.084443555544514 0.9233245503690263 0.9831467414569202 0.8839125123880898 0.348368202851272 0.06077482639074554 0.4531757364025404 0.8080391499567496 0.016524696536422932 0.014596858780079436 8.232968323441495e-10 9.084443555544514 -0.09923422906883039 S(ph)VSVDIRRTPEEEFSVGDK ddPTM_A549_PD325901_60min_R1 1 SVSVDIRRTPEEEFSVGDK 19 2 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 S(0.725)VS(0.103)VDIRRT(0.172)PEEEFSVGDK 107.56 2.4228e-10 10248000.0 2025.7 1812.4 1678.8 2573.6 1846.3 1553.9 1921.4 2255.2 2045.0 1916.6 2804.8 True False 2231.3475727584773 1965.137308618352 1792.7334634444996 2732.5654269303222 1716.6222573892192 1541.2455535939025 1994.5199284304244 2210.218266829825 1959.0557616790634 1795.5855489109967 2459.827381092117 0.9071155114013737 0.7988923628233898 0.7288045808517506 1.1108769045887743 0.6978628950081331 0.6265665491167997 0.8108373554021077 0.8985257599045547 0.7964200157855303 0.7299640465477666 1.0 11.26434136234845 -10.755466575103327 0.7489177726671216 1.0150816893534056 0.8151695751081038 0.0 0.14464993847027335 0.9724512174216925 0.8466207354712643 0.12097397128323034 0.022995127531002444 1.7560360399746266e-11 10.755466575103327 -0.19991211424530175 S(ph)VTLEEAIAEQNESER ddPTM_A549_PD325901_60min_R1 2 SVTLEEAIAEQNESER 16 0 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;H7C231 H7BYY2 BCOR BCL-6 corepressor 1 S(0.993)VT(0.007)LEEAIAEQNESER;S(0.99)VT(0.01)LEEAIAEQNESER 76.548 0.00045512 2192370.0 570.46 681.76 670.9 634.96 708.22 571.31 492.72 696.46 352.3 842.27 617.77 True False 628.3726792495437 739.2143078369282 716.431308449437 674.180037101212 658.4770704263627 566.6574407772265 511.4707292267294 682.5685589376998 337.4940561562515 789.0889284573027 541.7882063666848 1.159812398766499 1.3643971927595349 1.3223457063673196 1.2443608575800629 1.215377268623493 1.0459021331920801 0.9440418289219157 1.2598438853350273 0.6229261770379585 1.4564527599245 1.0 9.081585179103719 -7.7068170741760245 0.900943763279084 0.8394690024125083 1.2892522329041025 0.0 0.237601696581863 0.3187693683375038 0.521294264790779 0.033742272693159076 0.06126971369415019 1.9641874228377593e-08 7.7068170741760245 0.4497832304915942 S(ph)VTLESK ddPTM_A549_PD325901_60min_R1 1 SVTLESK 7 0 P82933 P82933 MRPS9 28S ribosomal protein S9, mitochondrial 1 S(0.999)VT(0.001)LESK 62.463 0.032029 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)VTPASTLTK ddPTM_A549_PD325901_60min_R1 1 SVTPASTLTK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.789)VT(0.211)PASTLTK 114.71 9.371299999999999e-05 21400000.0 11537.0 12976.0 12738.0 15615.0 17685.0 17374.0 16755.0 17667.0 15286.0 15753.0 15943.0 True False 12708.22774690949 14069.533059275962 13602.477279816563 16579.503085761975 16442.86660993791 17232.51190433134 17392.620693687808 17314.617825506615 14643.582578496907 14758.352891576202 13982.112071003863 0.908891852845597 1.0062523449839451 0.9728485375271317 1.1857652836401296 1.1759930492931154 1.2324684437387798 1.2439194168495233 1.2383406553730685 1.0473083396938867 1.0555167071062252 1.0 13.771294683339583 -3.8068912678606255 11.491033607744646 1.070596714684884 0.5915297180448782 0.0 0.11845614822261812 0.0 0.0 0.01733282537188661 0.0 0.00015599430090769068 3.8068912678606255 -0.47906699664000585 S(ph)VTPPEEQQEAEEPK ddPTM_A549_MK2206_60min_R1 2 SVTPPEEQQEAEEPK 15 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.683)VT(0.317)PPEEQQEAEEPK;S(0.979)VT(0.021)PPEEQQEAEEPK 144.4 1.4552999999999999e-13 21920000.0 2326.4 2668.8 2347.8 2267.99 3762.3 2620.6000000000004 2223.1 2665.1 4435.6 3896.0 3581.7999999999997 True False 2719.0394449807964 2804.6305206335455 2680.7533436040185 2823.647651813939 3208.8706538886727 2897.910152586507 2627.008493727499 3042.8860865264455 3430.9436821976997 3015.890894110485 2692.3402073489756 1.0099167399271989 1.0417073269485275 0.9956963597270027 1.0487707475104924 1.1918518488598813 1.076353628964278 0.975734227998695 1.1302011826813805 1.2743351203657851 1.1201745180190639 1.0 11.394645006810881 -6.547178008020306 15.592938160584442 1.1200639379203958 1.0190105698730936 0.21803794530855514 0.07825034308951961 4.966825298687852 3186.536658539019 0.015557529722590654 0.03240990855875404 2.8367560644768736e-07 6.547178008020306 -0.10105336804730225 S(ph)VTPPEEQQEAEEPK ddPTM_A549_PD325901_60min_R1 3 SVTPPEEQQEAEEPK 15 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(0.984)VT(0.016)PPEEQQEAEEPK;S(0.5)VT(0.5)PPEEQQEAEEPK;S(0.948)VT(0.052)PPEEQQEAEEPK 203.04 8.510299999999999e-39 28391600.0 2571.0699999999997 2514.79 2797.85 2882.29 4103.49 3015.3500000000004 3567.52 3370.12 3514.7799999999997 3976.86 3148.74 True False 2832.083133678304 2726.7201789562732 2987.7289258388105 3060.3225071444676 3815.2750186719854 2990.7939893361054 3703.283925821849 3302.900312792006 3367.0660195766955 3725.7603809048246 2761.464941507413 1.0255727281231903 0.9874179961407825 1.081936214699103 1.1082242838375185 1.3816126945248577 1.0830461558217384 1.341057737202458 1.1960681677128362 1.2193042790319475 1.3491970601919092 1.0 11.43121809628817 -6.049655638348033 2.6896076946180276 1.1477446424062405 1.0078758728414718 0.19992385375977473 0.12377779981455407 0.3971188121952154 5.622296921005821 0.018084105338604554 0.06200478417497392 8.919579108659109e-07 6.049655638348033 -0.13986876956476868 S(ph)VVADTDQK ddPTM_A549_MK2206_60min_R1 2 SVVADTDQK 9 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 S(1)VVADTDQK;S(1)VVADTDQK 150.46 2.2563e-05 17983000.0 5192.200000000001 6503.4 4890.200000000001 5668.8 9739.0 7355.7 6288.6 7998.3 9905.8 7694.5 9288.8 True False 6068.516422897734 6834.395281732688 5583.703893386302 7057.656254482104 8306.406001175292 8134.075291681514 7431.15721904312 9132.083518766452 7662.1521163121015 5956.3071059376625 6982.1346021618065 0.8691491597739753 0.9788403792182157 0.7997130120719067 1.010816413120554 1.189665693153991 1.1649840278305497 1.064310220651187 1.3079214365101153 1.0973939279170797 0.8530782411575785 1.0 12.769452454213813 -6.503315674386154 9.762098912998573 1.086521455939948 0.894210748425695 0.39721548730474265 0.11486257394299579 0.28048541280177347 133.71199931811256 0.014306078983152415 0.032189751094179764 3.1382267907376187e-07 6.503315674386154 -0.19231070751425305 S(ph)VVGTPAYLAPEVLR ddPTM_A549_MK2206_60min_R1 1 SVVGTPAYLAPEVLR 15 0 O94806;H0Y5M6;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 S(0.993)VVGT(0.007)PAYLAPEVLR 121.13 5.260199999999999e-07 3288100.0 1604.5 2262.5 1750.9 1337.6 1992.9 1759.4 1013.9 815.84 1835.3 2232.3 1539.5 True False 1875.300373741267 2377.6515860811605 1999.2039480859846 1665.3120600471452 1699.7470499786675 1945.5785402048 1198.1125058658229 931.4878184052142 1419.607480371863 1728.021879600319 1157.1996619615131 1.6205503988503904 2.0546597654988235 1.7276223056419069 1.439087924744426 1.4688450972216054 1.6812816354499656 1.0353550430830236 0.8049499572323537 1.2267610569169671 1.4932789356948417 1.0 10.176422091605563 -7.119142399441554 0.7474429036033199 1.0746121322034348 1.835762411003591 0.5495973840588861 0.23542296146635613 0.3082836752057694 0.3273684315059487 0.03835330640060345 0.11565642586955387 7.600770168332133e-08 7.119142399441554 0.7611502788001563 S(ph)VVGTPAYLAPEVLR ddPTM_A549_PD325901_60min_R1 2 SVVGTPAYLAPEVLR 15 0 O94806;H0Y5M6;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 S(0.999)VVGT(0.001)PAYLAPEVLR;S(1)VVGTPAYLAPEVLR 154.69 2.1351e-19 9231400.0 4262.799999999999 5288.0 4026.9 3666.7999999999997 5750.8 4730.9 5134.4 4765.8 4675.5 5244.5 4847.4 True False 4695.556317892498 5733.638318237618 4300.1896497168555 3893.2899080929856 5346.883647182971 4692.373118924896 5329.792401651485 4670.742380302226 4479.004994489223 4913.361374968029 4251.2005302003445 1.1045247770683762 1.3487103883964304 1.0115235964919778 0.9158095179079939 1.257734987846125 1.1037760005886526 1.2537146539639499 1.0986878523187684 1.0535859135955985 1.1557585533930292 1.0 12.053654597532896 -8.823615709681505 2.2239166398144743 1.0214171597842057 1.1407580054488677 0.02831716232839998 0.12023030996040888 0.37876089913989397 3.657633380408466 0.02100822343002681 0.022258710242766763 1.501012435647952e-09 8.823615709681505 0.11934084566466208 S(ph)VVSDLEADDVK ddPTM_A549_MK2206_60min_R1 2 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.977)VVS(0.023)DLEADDVK;S(0.991)VVS(0.009)DLEADDVK 194.12 6.6701e-21 17395700.0 2066.5299999999997 3368.7 2904.7 2208.5 4222.5 3273.9 2650.8999999999996 4071.4 3539.1000000000004 4251.3 3929.1 True False 2415.309742192297 3540.1524411189384 3316.630137646558 2749.5825991433326 3601.3758435119253 3620.3419249610656 3132.5342161946064 4648.533418139571 2737.499500781379 3290.9283773439192 2953.396032356597 0.8178076071515049 1.1986717671229998 1.1229886210012026 0.9309901445724378 1.219401598721011 1.2258233861282375 1.0606549822223028 1.5739620989571035 0.9268988888689783 1.1142861781113709 1.0 11.528159110692927 S(ph)VVSDLEADDVK ddPTM_A549_PD325901_60min_R1 2 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.998)VVS(0.002)DLEADDVK;S(0.999)VVS(0.001)DLEADDVK 198.33 1.6051e-24 25311000.0 5551.200000000001 6215.3 5171.4 5155.7 6318.4 4920.0 5298.0 4717.9 5242.200000000001 5047.7 5748.9 True False 6114.753737422547 6739.085143597248 5522.362302154446 5474.155879555747 5874.617381296671 4879.933151220799 5499.6182891768385 4623.797783379048 5021.888564241559 4728.987360554129 5041.821745279689 1.212806411322925 1.3366369308686072 1.0953108977572747 1.0857495873750043 1.165177524730356 0.9678908532991165 1.0907998273294277 0.9170887066183949 0.9960464328083808 0.937952113237949 1.0 12.299729396958687 -6.159038675092886 0.617209587139162 0.9933746180118409 1.3234257078964038 0.6782177352738709 0.06913039346915716 0.5889378654933929 0.2753294274466234 0.011081809584951283 0.111558230706238 6.933640573310825e-07 6.159038675092886 0.3300510898845629 S(ph)VVSFDK ddPTM_A549_MK2206_60min_R1 4 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.994)VVS(0.006)FDK;S(1)VVSFDK;S(0.998)VVS(0.002)FDK;S(1)VVSFDK 107.15 0.0093248 128535700.0 10648.7 12178.400000000001 10834.0 9754.8 14578.2 11599.199999999999 9834.5 11154.6 16921.7 15011.800000000001 15513.8 True False 12445.94022428086 12798.228541847862 12370.424109637082 12144.726437909609 12433.76609162476 12826.619645074186 11621.301350170066 12735.798709529801 13088.961968402213 11620.623953852111 11661.29530090193 1.0672862579269597 1.0974963082238385 1.0608104666280345 1.0414560410772111 1.0662422801918998 1.099930952274412 0.9965703680680508 1.0921427149301988 1.1224277947399086 0.996512278782043 1.0 13.509440427127117 -11.069589691100978 1.4043099205776435 1.0002566796417627 1.076666886352977 0.42518947465631074 0.032318613661921666 0.34561345273901184 1.2232188617076087 0.024518936493993015 0.005498580796910208 8.519425488486765e-12 11.069589691100978 0.07641020671121423 S(ph)VVSFDK ddPTM_A549_PD325901_60min_R1 2 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.999)VVS(0.001)FDK;S(0.995)VVS(0.005)FDK 111.61 0.0080628 191838000.0 9482.4 8673.4 9322.1 9321.4 11313.599999999999 9097.7 9708.3 9912.400000000001 9333.599999999999 8805.9 10493.5 True False 10445.046267426069 9404.33785729994 9954.753764341185 9897.16170756462 10518.971765801161 9023.611347532817 10077.754669085609 9714.689405872628 8941.34125046832 8249.893971175707 9202.866023777142 1.1349775429132127 1.0218922923578657 1.0817014763250292 1.0754434196905236 1.143010420734545 0.9805218639735501 1.0950669762058955 1.0556156506867649 0.9715822470268362 0.8964483400997827 1.0 13.167867510438146 -8.669389591389749 4.9850841651276285 0.986642739657869 1.073128937097149 0.48636734966417416 0.051423833029186274 0.13109762122273483 5.509441876701199 0.006923128826511545 0.007823245045289869 2.1409691459439406e-09 8.669389591389749 0.0864861974392801 S(ph)WADEEDEVMVYGGVR ddPTM_A549_PD325901_60min_R1 1 SWADEEDEVMVYGGVR 16 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 S(0.995)WADEEDEVMVY(0.005)GGVR 40.856 0.030129000000000003 3246700.0 1238.3 985.42 1331.7 1034.5 1229.5 1424.6 1067.1 985.18 1220.8 1122.8 1138.7 True False 1364.0113044117202 1068.4648017317904 1422.0771701626416 1098.3987154800348 1143.1441615447352 1412.9985299246252 1107.7090744395255 965.529812041241 1169.4940214463581 1051.906216381753 998.6471188140307 1.365859149557841 1.0699122659069737 1.4240036779472875 1.0998867315458405 1.1446927948906573 1.4149127387486666 1.1092097033785209 0.9668378287496399 1.1710783513151484 1.0533312484103208 1.0 9.963831168218833 -14.999999996315537 0.057842546685849115 0.2256226542157816 1.5399528631792287 0.28973061070847417 0.13097887766183275 264.57024921133586 1.159530464691827 29.744393086992943 5.603430628905821 1.0000000084837885e-15 14.999999996315537 1.3143302089634472 S(ph)WAGER ddPTM_A549_MK2206_60min_R1 2 SWAGER 6 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(1)WAGER;S(1)WAGER 77.318 0.044689 17704300.0 1934.21 1914.05 1545.3600000000001 1634.79 3285.2 2518.1 2225.4 2507.63 3301.6 3717.3 3562.1000000000004 True False 2260.657361105703 2011.4669694314439 1764.5152854041676 2035.3136233885118 2801.9514318781244 2784.5636706205005 2629.7263739558157 2863.094231794797 2553.792871571812 2877.559348223028 2677.532261041315 0.8443063017386443 0.7512391162185913 0.6590080392599761 0.7601453222442075 1.0464678512551038 1.039973901019426 0.9821455420795164 1.0693033557255125 0.9537860322843021 1.0747057617538922 1.0 11.386688242481288 -6.751743904851142 24.598069812118442 0.9937162171168333 0.7467387229297906 0.8312325822379103 0.05750819450033911 49.48013325727973 125533.236358398 0.007717529332692404 0.015902263708857455 1.77115306552653e-07 6.751743904851142 -0.24697749418704273 S(ph)WAGER ddPTM_A549_PD325901_60min_R1 2 SWAGER 6 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 S(1)WAGER;S(1)WAGER 96.311 0.03506 23325000.0 5956.4 5147.2 5309.6 5037.7 4490.700000000001 5508.6 4025.6 3928.1 6589.200000000001 5838.700000000001 6781.2 True False 6561.089343130078 5580.972608099969 5669.941385218561 5348.867287553189 4175.288724073971 5463.739787970512 4178.796410892844 3849.750963965165 6312.278838560236 5470.043485561224 5947.155389568547 1.1032315305966927 0.9384272383212197 0.9533871260811132 0.899399282039146 0.7020648445469454 0.9187148191140326 0.7026546537227785 0.6473264463070395 1.0613946374483714 0.919774770835114 1.0 12.537984056160834 S(ph)WASPVYTEADGTFSR ddPTM_A549_MK2206_60min_R1 2 SWASPVYTEADGTFSR 16 0 E9PMS6;Q8WWI1-3;E9PMP7;E9PJ10;E9PK58;E9PLU6 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.937)WAS(0.055)PVY(0.005)T(0.002)EADGTFSR;S(0.998)WAS(0.002)PVYTEADGTFSR 218.12 1.0882e-46 27974000.0 5362.8 4979.4 3684.7 3704.7 7267.8 6004.200000000001 4952.5 5551.9 7632.0 7710.8 7043.400000000001 True False 6267.909532128182 5232.830191262993 4207.245866418654 4612.351666310302 6198.716247596444 6639.560458734607 5852.305143801649 6338.898826980663 5903.364185799629 5968.924924616819 5294.329392049187 1.1838911159439907 0.9883839488947267 0.7946702131410502 0.8711871371730191 1.1708217960343437 1.2540890388697075 1.1053912045197656 1.1972996686795063 1.1150353045024108 1.127418504330447 1.0 12.37023224101649 -6.761515651212748 24.99999999802763 1.092504240131157 0.9498179598197765 0.3212627234350097 0.11289834033289496 2.3989861952214464 786699.0565340464 0.01793152474758668 0.03549149785415376 1.7317466205093503e-07 6.761515651212748 -0.14268628031138064 S(ph)WASPVYTEADGTFSR ddPTM_A549_PD325901_60min_R1 3 SWASPVYTEADGTFSR 16 0 E9PMS6;Q8WWI1-3;E9PMP7;E9PJ10;E9PK58;E9PLU6 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.999)WAS(0.001)PVYTEADGTFSR;S(0.968)WAS(0.032)PVYTEADGTFSR;S(1)WASPVYTEADGTFSR 251.28 2.0149999999999996e-85 16680000.0 7155.1 6702.0 6431.7 5880.3 6907.3 5020.1 5761.4 5402.0 7438.1 7702.9 8756.6 True False 7881.480484693775 7266.801060671043 6868.193838954014 6243.512775869745 6422.15507689138 4979.217970008854 5980.6532297590475 5294.252872212981 7125.502523689504 7216.537579414866 7679.5937126608815 1.0262887308348168 0.9462481131899866 0.8943433853318097 0.8130004020364311 0.8362623489187405 0.6483699732447978 0.7787720878904187 0.6893923129663314 0.9278488928316767 0.9397030428207936 1.0 12.906814272140538 -8.96635774208218 11.570892269683933 0.9682283133034301 0.8259846460259547 0.2411169217925868 0.10170803125762944 0.6409438444129621 218.1573870102363 0.01912041166802565 0.020078994158208883 1.0805435067885379e-09 8.96635774208218 -0.1422436672774754 S(ph)WDQQIK ddPTM_A549_PD325901_60min_R1 1 SWDQQIK 7 0 F8W8D3;Q14493;E7EUV9;H0YAE8;Q14493-2 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 S(1)WDQQIK 102.07 0.0067870000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)WGQQAQEYQEQK ddPTM_A549_MK2206_60min_R1 2 SWGQQAQEYQEQK 13 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK 260.18 1.5137e-69 13265700.0 6136.799999999999 6212.700000000001 4315.1 3885.8 7676.5 6633.5 5435.200000000001 5382.7 9423.9 7671.5 8869.0 True False 7172.541809645003 6528.899893412782 4927.046065672416 4837.821174440192 6547.297018998061 7335.452567039075 6422.705485631641 6145.714208827396 7289.401696875936 5938.502821911854 6666.582528052391 1.0758948500920194 0.979347344151182 0.739066237452224 0.7256823348519377 0.982106947817358 1.1003317721144437 0.9634179819428415 0.9218687660381871 1.0934240544091034 0.8907866657201284 1.0 12.702731670759158 -6.986604195337436 24.946770526554225 1.0321242851717447 0.8741359155578784 0.14941661305021514 0.11214983763440824 214.46364347995578 399389.1894217463 0.015712356114216966 0.029682107042682628 1.0313256155255733e-07 6.986604195337436 -0.1579883696138663 S(ph)WHEESPFEK ddPTM_A549_MK2206_60min_R1 1 SWHEESPFEK 10 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 S(1)WHEESPFEK 121.04 1.4359000000000001e-05 3919800.0 557.24 591.16 609.13 484.17 1134.0 887.01 619.84 867.97 1161.6 1082.8 1172.4 True False 651.2884887900184 621.2475189514865 695.513793419165 602.7916717352173 967.1901022007158 980.8728094504144 732.456904661083 991.0074055466434 898.4994546940324 838.1947279627402 881.2607234060914 0.7390417744623572 0.7049531454781641 0.7892259066431435 0.6840105949637862 1.097507328435682 1.113033615817258 0.8311466575182443 1.1245337267685989 1.0195614428625763 0.9511313799656245 1.0 9.783425097362924 -6.7575348917605425 24.999999250270196 1.017682387762222 0.7318480566099989 0.7465702155653225 0.08133974903292418 34.732681396919425 222386.19490717558 0.010483648167540967 0.02119437473947082 1.7476928449538885e-07 6.7575348917605425 -0.28583433115222323 S(ph)WHEESPFEK ddPTM_A549_PD325901_60min_R1 2 SWHEESPFEK 10 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 S(0.999)WHEES(0.001)PFEK;S(1)WHEESPFEK 82.54299999999999 0.00031959 9341100.0 1391.6399999999999 1451.55 1296.99 1378.5500000000002 1390.26 1887.73 1370.6599999999999 1380.84 1538.56 1557.8400000000001 2065.45 True False 1532.9182683287781 1573.8772127151672 1385.0115408344548 1463.6999025857938 1292.612933736628 1872.3569527548868 1422.8212163539308 1353.2980629519752 1473.8996736865236 1459.4777165373616 1811.4127439663132 0.8462556495943951 0.8688672517942915 0.7646029572486058 0.8080432841500502 0.7135938167831875 1.033644573271097 0.7854759888894715 0.7470953638035918 0.813674121812369 0.8057124039779326 1.0 10.822899597282456 -10.597252718914712 0.8183845560749424 1.0037370918008794 0.819717272411436 0.0 0.09771134858209231 0.5097255306329525 0.5925198560922756 0.05788739166527504 0.014750871706523153 2.5278266088750256e-11 10.597252718914712 -0.18401981938944345 S(ph)WITIPR ddPTM_A549_MK2206_60min_R1 1 SWITIPR 7 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 S(1)WITIPR 86.67 0.013046 7831900.0 424.27 493.36 388.71 315.12 1020.4 695.81 674.25 735.32 953.93 639.59 513.24 True False 495.87640359439575 518.469916689061 443.8349229884649 392.32441414627453 870.3005117157061 769.440152358703 796.7524973666351 839.5538618230552 737.8663781131866 495.10617478545345 385.78834329660725 1.2853587004653197 1.3439232306986624 1.1504622436122427 1.0169421159639396 2.255901524340743 1.9944619004912005 2.0652580908958793 2.1762032897338672 1.9126196810614615 1.2833621942921145 1.0 8.59166574238351 -4.306981560708341 17.212046951246165 1.5484849773501939 1.2491355118733183 0.0 0.4686711500985051 0.0 0.0 0.0713459576124196 0.0 4.931947435916191e-05 4.306981560708341 -0.2993494654768756 S(ph)WITIPR ddPTM_A549_PD325901_60min_R1 2 SWITIPR 7 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 S(0.983)WIT(0.017)IPR;S(0.999)WIT(0.001)IPR 85.676 0.013496000000000001 11268400.0 2018.17 1925.61 1927.5700000000002 1860.3400000000001 1640.75 1488.94 1646.0700000000002 1620.5900000000001 2204.0 2040.8 2395.8 True False 2223.0531327017698 2087.8879126288834 2058.3864916200355 1975.2489766613137 1525.5093802802146 1476.814566296483 1708.7120946140665 1588.2660611217393 2111.3735446164583 1911.9435397148925 2101.131788227501 1.0580265098826194 0.993696789666968 0.9796560611538198 0.9400880933449771 0.7260417403741831 0.7028662240850264 0.8132341360917313 0.7559097768263211 1.0048743998098268 0.9099588852195671 1.0 11.036950938943116 -5.741409319899243 1.8690502999167482 0.9277403052766335 1.0470784650200837 0.08343314797206236 0.1155332695555358 0.9227740695475992 5.695207283403116 0.020614812851020545 0.13812077780581053 1.8138053564420164e-06 5.741409319899243 0.11933815974345019 S(ph)WPSPK ddPTM_A549_MK2206_60min_R1 2 SWPSPK 6 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.776)WPS(0.224)PK;S(0.727)WPS(0.273)PK 77.923 0.044334 106194000.0 20548.5 17112.9 12230.099999999999 11472.2 25862.0 20772.0 20376.8 19464.5 28820.0 27358.0 29507.0 True False 24016.58443740881 17983.873514894258 13964.512082635438 14282.889515006631 22057.73405918425 22970.079252662326 24079.00079842854 22223.652482531234 22292.316016082994 21177.808799043796 22179.597548228885 1.0828232741908617 0.8108295687416713 0.6296107065184576 0.6439652245244264 0.9945056041355284 1.035640038224975 1.0856374082563698 1.0019862819515346 1.0050820790417412 0.9548328707494927 1.0 14.436945567391632 -6.852221233510758 8.444215710795012 1.0114207205186558 0.781977865111653 0.4602447824769129 0.11413171280345343 0.16903536415721987 13.979789226634649 0.0162180467224816 0.030735355223808755 1.4053314532912154e-07 6.852221233510758 -0.22944285540700282 S(ph)WPSPK ddPTM_A549_PD325901_60min_R1 1 SWPSPK 6 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.634)WPS(0.366)PK 73.248 0.047148 74539000.0 11554.0 9542.5 9455.1 10584.0 7986.0 10298.0 9272.8 6831.5 13978.0 11282.0 13723.0 True False 12726.953574394753 10346.679964406663 10096.779944135156 11237.749641991979 7425.090910204354 10214.136502291023 9625.681478270853 6695.240373291924 13390.553269804379 10569.652594601837 12035.157997264372 1.0574812210431825 0.8597045395464268 0.83894037339852 0.9337434244358366 0.616950015271266 0.8486915173538002 0.7997968518949896 0.5563068116607836 1.1126196492682598 0.8782313117122643 1.0 13.554967461151936 -8.802949372111765 24.99998296579111 1.0531815764319137 0.8144218742100574 0.2242435622692941 0.14140306144655698 102.37563702044687 61656.732793966425 0.022589107309634916 0.024048049055691946 1.5741663622467084e-09 8.802949372111765 -0.23875970222185627 S(ph)WSPPPEVSR ddPTM_A549_MK2206_60min_R1 1 SWSPPPEVSR 10 0 Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic 1 S(0.867)WS(0.133)PPPEVSR 152.69 2.1425e-08 53804000.0 7497.8 6958.5 5236.2 4738.4 9836.5 7395.1 6187.0 6484.6 11397.0 10854.0 11428.0 True False 8763.245336389706 7312.657927843425 5978.771896149309 5899.308212714859 8389.563880332753 8177.644573529904 7311.097814174818 7403.811908254622 8815.597697269184 8402.07386156961 8590.112203245315 1.0201549326770123 0.8512878242825196 0.6960062633280331 0.6867556643190436 0.9766535851724037 0.9519834409660467 0.8511062069029448 0.861899324837397 1.0262494236034172 0.978109908552223 1.0 13.068461260497116 -8.756827984743238 23.147699594191288 1.0123955715786133 0.8567111116335269 0.2821599948860307 0.09839467523636623 39.15894407890104 196563.8394211114 0.01740182666331625 0.019394658002113107 1.7505399047669848e-09 8.756827984743238 -0.1556844599450864 S(ph)WSTATSPLGGERPFR ddPTM_A549_PD325901_60min_R1 2 SWSTATSPLGGERPFR 16 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q6NVB9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.966)WS(0.024)T(0.004)AT(0.005)SPLGGERPFR;S(0.997)WS(0.003)T(0.001)ATSPLGGERPFR 82.609 5.4081999999999995e-05 9884600.0 3581.8 3931.0 3361.1 3184.8 3480.3 3897.7 3232.1000000000004 3019.3999999999996 5104.4 3993.7 4667.3 True False 3945.4216992182037 4262.279165845698 3589.204457936209 3381.51786279441 3235.8557343831976 3865.958423478314 3355.0993341729854 2959.1756983265223 4889.879819029151 3741.537100430895 4093.2516884523848 0.9638844614292277 1.0412941813155938 0.8768589696211057 0.8261201900518671 0.7905342697376717 0.9444712218368356 0.8196660233814044 0.7229400788313985 1.194619874664478 0.9140745268575289 1.0 11.999031663516947 -8.76952720868581 24.999858498661606 1.0919038280767384 0.8752084309895733 0.27740018100763875 0.10733051530432251 118.33271061569243 365770.8471512213 0.018955084052538117 0.02035032406211313 1.7000934389174362e-09 8.76952720868581 -0.216695397087165 S(ph)YDNLTTACDNTVPLASR ddPTM_A549_MK2206_60min_R1 2 SYDNLTTACDNTVPLASR 18 0 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 S(0.785)Y(0.058)DNLT(0.138)T(0.019)ACDNTVPLASR;S(0.998)Y(0.002)DNLTTACDNTVPLASR 84.035 0.00012465 2871500.0 1731.17 1578.3899999999999 1090.0900000000001 1321.55 2374.1 1665.1 1472.42 1810.01 2227.7 2272.47 2438.2 True False 2023.349172957103 1658.7233091512217 1244.681153560484 1645.3298093266344 2024.873034951253 1841.2997767960737 1739.9396546868084 2066.5844604231465 1723.1295069059004 1759.117448701041 1832.7276491033208 1.104009738679419 0.9050571752779348 0.679141362967627 0.8977492155649136 1.1048412108269012 1.004677251252769 0.9493716404279109 1.1276004164799076 0.9401994386612531 0.9598357123938768 1.0 10.839776696027453 -6.551247930236269 24.62085201488871 0.9919870816738061 0.8788810009825685 0.19166817421076487 0.107934360646142 217.7754239077489 189000.72179640914 0.015104038797422033 0.031442018864335675 2.8102960292605483e-07 6.551247930236269 -0.11310608069123762 S(ph)YDSSMESR ddPTM_A549_MK2206_60min_R1 1 SYDSSMESR 9 0 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 S(0.837)Y(0.004)DS(0.154)S(0.003)MES(0.002)R 72.27600000000001 0.00096658 41189000.0 1819.9 2396.0 1924.2 1674.1 2838.5 1883.8 2154.4 2398.7 3315.8 2937.5 3186.8 True False 2127.054627716879 2517.946165856556 2197.080493978554 2084.2545751532034 2420.9604101382124 2083.142465634763 2545.826592994702 2738.723070710663 2564.7765942445526 2273.9167098176476 2395.42960879438 0.8879637372385265 1.051145964219687 0.917196851000078 0.8700963566206436 1.0106581304873667 0.869632093544677 1.062784973371026 1.1433118554834356 1.0706958721844493 0.9492730245419778 1.0 11.226068704254136 -7.780520653015595 24.981778705323855 1.0462301932560962 0.9395080250992568 0.3894107918742835 0.06889782575141666 186.60263600459146 244305.0947073373 0.010085804243529693 0.013947162047345009 1.6575985073373962e-08 7.780520653015595 -0.10672216815683944 S(ph)YDSSMESR ddPTM_A549_PD325901_60min_R1 2 SYDSSMESR 9 0 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 S(0.962)Y(0.018)DS(0.008)S(0.008)MES(0.003)R;S(0.62)YDS(0.314)S(0.058)MES(0.008)R 75.229 0.00074151 104314000.0 4891.86 4583.1 4570.6 4623.299999999999 5975.400000000001 4822.22 5465.599999999999 4644.2 4763.700000000001 5667.1 5526.9 True False 5388.478026003006 4969.333921390847 4880.788401250555 4908.870740723871 5555.708518010907 4782.949439121948 5673.596398891083 4551.5677876955815 4563.4982552129895 5309.278338846664 4847.126337905744 1.111685079025846 1.025212378420882 1.0069447464328638 1.0127383522759188 1.1461860349221502 0.9867598048183898 1.1705072249761959 0.9390239639724635 0.9414853125500956 1.0953455653356456 1.0 12.242913970775792 -8.310252461900761 24.999943289649448 0.9690951810198866 1.0599210370975436 0.16529859146524317 0.0690857819339825 301.39795844050195 154362.18914350658 0.009120292353199983 0.011025906850699239 4.8949418632828305e-09 8.310252461900761 0.09082585607765703 S(ph)YDVPPPPMEPDHPFYSNISK ddPTM_A549_MK2206_60min_R1 5 SYDVPPPPMEPDHPFYSNISK 21 0 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 S(1)YDVPPPPMEPDHPFYSNISK;S(0.997)Y(0.003)DVPPPPMEPDHPFYSNISK;S(0.977)Y(0.023)DVPPPPMEPDHPFYSNISK;S(0.914)Y(0.086)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK 166.05 6.228e-29 108536900.0 20555.0 25718.5 25072.2 22211.300000000003 34793.9 24912.5 24924.1 23468.0 40965.4 37282.3 37575.399999999994 True False 24024.18147849908 27027.461797404772 28627.814967845912 27653.069497103148 29675.763401200624 27548.724214420876 29452.486347223956 26794.66086773577 31686.802308301383 28860.202536318124 28244.39115171719 0.8505823810982899 0.9569143003375227 1.0135752197336854 0.9790641033316063 1.0506781060280144 0.9753697315137905 1.042772923976919 0.9486719229954694 1.1218794605305167 1.021802961915272 1.0 14.78567678120113 -3.6470018639172874 0.5062979529442939 1.0461284610496036 2.924747264922849e-14 0.49101197374955996 0.04694960871844352 11.032312032368349 0.5339010781279284 0.010363064480394776 9.911626241940478 0.0002254229537365859 3.6470018639172874 -1.0461284610495742 S(ph)YDVPPPPMEPDHPFYSNISK ddPTM_A549_PD325901_60min_R1 9 SYDVPPPPMEPDHPFYSNISK 21 0 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 S(0.691)Y(0.309)DVPPPPMEPDHPFYSNISK;S(0.528)Y(0.472)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(0.644)Y(0.356)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(0.998)Y(0.002)DVPPPPMEPDHPFYSNISK;S(0.991)Y(0.009)DVPPPPMEPDHPFYSNISK;S(0.905)Y(0.095)DVPPPPMEPDHPFYSNISK;S(0.995)Y(0.005)DVPPPPMEPDHPFYSNISK 167.51 1.5325999999999997e-35 235964000.0 40907.50000000001 42337.2 42598.9 44369.9 51800.0 50600.2 50209.9 53015.6 50728.600000000006 52102.3 57199.7 True False 45060.399285490166 45905.10442641633 45489.917521995456 47110.52795164584 48161.74670029873 50188.12874764287 52120.66522041153 51958.162268066364 48596.65335545845 48812.55188616586 50164.49951877312 0.8982527428311562 0.9150914464767501 0.9068149380214929 0.939120860440671 0.9600762922447797 1.0004710348771826 1.0389950207896792 1.0357556193423598 0.9687459024139585 0.9730497135309539 1.0 15.614379136427164 -6.754768772583266 1.7713591173715817 0.9943002920637345 0.9076671981795809 0.7780722139190168 0.022017354480703622 0.15200381554023898 0.9665727044417234 0.0038525899219022807 0.009327828135080778 1.758859818265817e-07 6.754768772583266 -0.08663309388415363 S(ph)YEDLTESEDGAASGDSHK ddPTM_A549_MK2206_60min_R1 2 SYEDLTESEDGAASGDSHK 19 0 A0A0A0MSQ9;Q86VX9-5;Q86VX9 A0A0A0MSQ9 MON1A Vacuolar fusion protein MON1 homolog A 1 S(0.997)YEDLT(0.003)ESEDGAASGDSHK;S(1)YEDLTESEDGAASGDSHK 131.82 4.4807e-17 6052600.0 1003.58 1180.26 877.6600000000001 983.95 1071.48 921.25 820.14 1066.24 1662.66 1636.87 1621.1399999999999 True False 1172.959768824719 1240.3301927019436 1002.1253852745135 1225.0177941711938 913.8667113809729 1018.7360635237424 969.1488219358868 1217.3827852230525 1286.0701647224332 1267.099930144413 1218.5661968121392 0.9625736967702452 1.0178603312210208 0.8223807519822467 1.0052944168120965 0.7499524554117101 0.8360120822232165 0.7953189777225504 0.9990288491571631 1.0553962255697635 1.0398285570855665 1.0 10.250968910133313 -8.430729995031056 6.936769339043264 1.0262247063353078 0.8848380264572226 0.408769555785243 0.08117968589183108 0.19761985193411513 12.8536845687456 0.013474216118645427 0.016279812217631744 3.709112491309186e-09 8.430729995031056 -0.14138667987808518 S(ph)YEDLTESEDGAASGDSHK ddPTM_A549_PD325901_60min_R1 2 SYEDLTESEDGAASGDSHK 19 0 A0A0A0MSQ9;Q86VX9-5;Q86VX9 A0A0A0MSQ9 MON1A Vacuolar fusion protein MON1 homolog A 1 S(0.997)Y(0.001)EDLT(0.002)ESEDGAASGDSHK;S(0.991)Y(0.009)EDLTESEDGAASGDSHK 127.88 6.5015e-17 8961600.0 1274.4099999999999 929.77 1088.05 1382.37 1085.54 1146.74 832.33 1538.71 1139.42 1200.8899999999999 1764.85 True False 1403.7871650289435 1008.1249809280991 1161.8916159761668 1467.7558553099425 1009.2954153096971 1137.4013296404353 864.0047736184517 1508.0192219553558 1091.5341398397836 1125.0656004548298 1547.784638305912 0.9069654332306998 0.6513341429926043 0.750680415880006 0.9482946263870644 0.6520903427587933 0.7348576161638022 0.5582202796405358 0.9743081722311959 0.7052235258223614 0.7268876900640657 1.0 10.59598903078082 -10.874129880513307 0.8403610999810719 1.0193790712203268 0.7572317740574278 0.0 0.14828986036195527 0.6626448595027166 0.7234547086701351 0.11894270940535184 0.021352590277740446 1.3361958528080214e-11 10.874129880513307 -0.262147297162899 S(ph)YEQVPPQGFTSR ddPTM_A549_MK2206_60min_R1 3 SYEQVPPQGFTSR 13 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.996)Y(0.004)EQVPPQGFTSR;S(1)YEQVPPQGFTSR;S(0.989)Y(0.011)EQVPPQGFTSR 81.619 9.434e-06 3421000.0 1397.1 1635.7 870.93 1473.0 1935.4 1393.4 1257.0 1545.8 1881.3 2045.1 2236.4 True False 1632.8963241844342 1718.9501433604212 994.4409700762612 1833.8850661254817 1650.705223808876 1540.8486631359383 1485.3806291284543 1764.9218838139577 1455.1885538187696 1583.1104896163638 1681.0401584999854 0.9713606875647096 1.0225515045959779 0.5915628874467902 1.0909228175499874 0.9819546638801434 0.9166043150990861 0.8836080575575775 1.0498987040195524 0.8656477041674328 0.9417445987899506 1.0 10.715138474302645 -8.38002543650564 0.006749200835423847 1.8651678848021607 8.826302178575104e-07 0.009325074499845432 0.1268364315464922 9365.07888941166 48.121066492417405 6623.196042061707 6671.612803051327 4.168449682628116e-09 8.38002543650564 -1.8651670021719429 S(ph)YEQVPPQGFTSR ddPTM_A549_PD325901_60min_R1 1 SYEQVPPQGFTSR 13 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.992)Y(0.008)EQVPPQGFTSR 77.372 0.00092095 4877500.0 3462.7 3376.3 3225.1 4198.6 4773.3 5544.1 3238.4 3471.3 4687.9 3776.2 3844.9 True False 3814.2307548949893 3660.832650125881 3443.9746801017736 4457.937986287558 4438.039874991045 5498.950687740498 3361.639084120478 3402.0621983178316 4490.883865611385 3537.7700875496744 3372.0016748292505 1.1311473488779131 1.0856556440800866 1.021344297012002 1.3220450095159861 1.3161440304491472 1.6307674841291266 0.9969268726091907 1.0089147415652169 1.3318154315088802 1.049160240327822 1.0 11.71938953751007 -3.900608311113117 14.819043895353749 1.174901648857039 1.2065188836474747 0.0 0.19379546042713477 0.0 0.0 0.026707216840153904 0.0 0.00012571632843334438 3.900608311113117 0.031617234790435766 S(ph)YKYSPK ddPTM_A549_PD325901_60min_R1 1 SYKYSPK 7 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 S(0.675)Y(0.019)KY(0.023)S(0.283)PK 56.563 0.010401 106490000.0 8253.5 7741.3 8743.8 7902.4 10825.0 9795.7 9949.9 8975.6 10038.0 10873.0 11700.0 True False 9091.389244094438 8393.686519094717 9337.206848740781 8390.51330034744 10064.689344222663 9715.92706695398 10328.548889294196 8796.574616778016 9616.137768085306 10186.476924402215 10260.974172410793 0.8860161902111519 0.818020431399511 0.9099727464324203 0.8177111801828176 0.9808707414237635 0.9468815439646745 1.0065856044219557 0.8572845491054657 0.9371564148305438 0.9927397489987956 1.0 13.324880085834405 -2.0000000032790957 0.10421855263763474 1.0362232914303833 0.47911509059758883 0.40511530612743074 0.051928089587558665 72.90212864777419 0.5179024817167974 0.28891854536190426 5.846799931454917 0.009999999924496033 2.0000000032790957 -0.5571082008327944 S(ph)YMIPENEFHHK ddPTM_A549_MK2206_60min_R1 1 SYMIPENEFHHK 12 0 A0A0C4DG98;Q8NI27;H0Y815 A0A0C4DG98 THOC2 THO complex subunit 2 1 S(0.997)Y(0.003)MIPENEFHHK 42.317 0.020645 121120000.0 7183.4 7875.6 7897.3 6639.5 11813.0 9297.9 7547.4 8383.6 12963.0 13491.0 12004.0 True False 8395.782302731712 8276.434400592607 9017.255890810127 8266.177798058483 10075.323348586477 10281.797606553491 8918.664884871992 9572.000973698208 10026.90119765731 10443.373730093574 9023.075506454046 0.9304790031654238 0.9172520383623766 0.999355029708024 0.9161153303156814 1.1166174262178983 1.1395003399006363 0.9884284885450232 1.0608357390838108 1.1112509465852574 1.15740732997564 1.0 13.139403543159034 -6.75238721760966 24.99999973576896 1.0597582236991165 0.9433007901458936 0.5734056151593425 0.05653867762847707 128.2406112681146 354168.53546139895 0.00805890868187951 0.016587586726221216 1.768531429890407e-07 6.75238721760966 -0.11645743355322291 S(ph)YMIPENEFHHK ddPTM_A549_PD325901_60min_R1 1 SYMIPENEFHHK 12 0 A0A0C4DG98;Q8NI27;H0Y815 A0A0C4DG98 THOC2 THO complex subunit 2 1 S(1)YMIPENEFHHK 45.79 0.011006 155880000.0 8068.2 9119.6 8841.3 9125.5 9652.6 9741.2 10286.0 10667.0 11133.0 10735.0 11236.0 True False 8887.277724505084 9888.14069723898 9441.323785055907 9689.161409485805 8974.634675662232 9661.87089688457 10677.439358715177 10454.238316900384 10665.118726050378 10057.190267953434 9854.04323087244 0.9018914892377875 1.003460251347357 0.9581167409004769 0.9832675971148509 0.9107565763000668 0.9804981235128135 1.0835592161056349 1.060908509529119 1.082308903682994 1.0206156023797968 1.0 13.266500085602672 -7.5968804091100095 6.147564636938219 1.0447330081346082 0.9554678074115827 0.6372357081787346 0.035348375337964505 0.1245873774823622 8.012561336239294 0.006215838912079368 0.009261449664543927 2.52999458058824e-08 7.5968804091100095 -0.08926520072302557 S(ph)YPGHVQPATAR ddPTM_A549_MK2206_60min_R1 2 SYPGHVQPATAR 12 0 Q86VS8;H0YDK4 Q86VS8 HOOK3 Protein Hook homolog 3 1 S(0.998)Y(0.002)PGHVQPATAR;S(0.991)Y(0.009)PGHVQPATAR 116.78 2.1661e-08 9215600.0 1391.2 1243.9 1347.0 1166.0 1585.3 969.39 1135.6 1292.4 1391.4 1328.4 1743.6 True False 1626.000548425586 1307.2091968735267 1538.0248546872006 1451.6700523437296 1352.1044700342118 1071.9702063709967 1341.923820555507 1475.6016578090048 1076.2501216092248 1028.3135173861322 1310.6159990880774 1.2406384093868472 0.9974006099292843 1.1735129555547572 1.1076242418479534 1.0316557031006808 0.8179132614868659 1.023887867605167 1.125884056684585 0.8211788367897815 0.7846032080347177 1.0 10.356029333027381 -6.95295791316875 3.7296808524880207 0.9335859239967362 1.1225101844778056 0.42371966774124925 0.10908717743247387 0.17978497333221805 5.2521216696562565 0.015804572717889088 0.030501044544540487 1.1144025234474409e-07 6.95295791316875 0.18892426048106936 S(ph)YPGHVQPATAR ddPTM_A549_PD325901_60min_R1 1 SYPGHVQPATAR 12 0 Q86VS8;H0YDK4 Q86VS8 HOOK3 Protein Hook homolog 3 1 S(0.95)Y(0.05)PGHVQPATAR 103.6 5.9058e-05 19443000.0 2155.4 1899.1 2067.7 2176.8 2030.6 1861.4 1898.6 1968.3 2176.3 2077.6 1834.8 True False 2374.2146212783828 2059.1438218920302 2208.02655609018 2311.2559921285088 1887.9776611897028 1846.2413755452028 1970.8522619537848 1929.0407123985208 2084.837679287112 1946.419981434565 1609.1312317554978 1.4754636380329338 1.2796618332027443 1.3721855076302951 1.436337786823652 1.173290048649416 1.1473528939780924 1.224792747204132 1.1988088195230755 1.2956293670421384 1.2096092245447867 1.0 10.652066273670874 -14.999999999999998 0.11800366467520355 0.0788644375538605 1.442416951690419 0.39221601693489894 0.10161887944572125 43.63378092614013 0.35985109101688434 9.761544942509467 0.3779848236348601 1.000000000000004e-15 14.999999999999998 1.3635525141365585 S(ph)YQPHGR ddPTM_A549_PD325901_60min_R1 1 SYQPHGR 7 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 S(0.995)Y(0.005)QPHGR 57.59 0.010699 2409400.0 563.52 385.99 373.92 405.12 501.83 445.58 215.14 523.46 534.12 331.32 506.94 True False 620.7281355585015 418.5187319320226 399.2964597636216 430.14334230572445 466.5831920195158 441.9513442115782 223.3272704291252 513.019179653574 511.67279385233354 310.40039865657513 444.5895937574294 1.3961823314676465 0.9413597119872509 0.8981237198760887 0.9675065461392988 1.049469440065406 0.994065876523213 0.5023223070555579 1.1539163013641751 1.1508879223374382 0.6981728835199219 1.0 8.796330370235331 -11.70567613397614 4.099263200883272 0.9986029663639158 1.0313149524415635 0.0 0.22670024995933188 2.6778122317711466 80.57449491519539 0.2100270612926404 0.0286246466451981 1.9693543470550795e-12 11.70567613397614 0.03271198607764769 S(ph)YRDLDKPR ddPTM_A549_MK2206_60min_R1 1 SYRDLDKPR 9 2 Q8NAV1;Q8NAV1-2 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 1 S(0.981)Y(0.019)RDLDKPR 51.013000000000005 0.0055324 5745800.0 513.74 399.22 435.24 433.42 561.81 396.82 502.58 482.08 741.13 760.86 1093.4 True False 600.4467522629101 419.5385927935117 496.9635766548309 539.6079194569634 479.168493225207 438.8112290122023 593.8922804991075 550.416316308082 573.2652383414152 588.9811975597805 821.878603695173 0.7305783963267769 0.5104629697223687 0.6046678602174075 0.6565542855488411 0.5830161426162714 0.5339124623019792 0.7226034086165073 0.6697051289976472 0.6975059768729955 0.716627972685645 1.0 9.682781504872967 -10.40976574934846 0.4000240196809156 1.0843205791584247 0.5970305685421436 0.3093016866054066 0.10451758262751983 0.5082923492399817 0.12244311207199433 0.10250877714085388 0.019792503552492135 3.89255045568556e-11 10.40976574934846 -0.4872900106162811 S(ph)YS(ph)PAHNR ddPTM_A549_MK2206_60min_R1 3 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(0.976)Y(0.045)S(0.979)PAHNR;S(0.803)Y(0.354)S(0.843)PAHNR;S(0.99)Y(0.062)S(0.948)PAHNR 62.823 0.011726 10778100.0 1243.69 1226.37 1041.0 892.89 2399.2 1355.49 996.67 1287.31 2657.58 1728.2799999999997 1606.33 True False 1453.5944666988323 1288.786994750211 1188.6294533996854 1111.648090083355 2046.2808582010227 1498.927052098559 1177.7520378945558 1469.7901347215336 2055.6423732831995 1337.8603476574103 1207.4339285473443 1.2038708142379617 1.0673768264080024 0.9844260835288251 0.9206699131113298 1.6947352644487053 1.2414153823736824 0.9754173789960511 1.2172841096902323 1.7024884962080942 1.108019508170506 1.0 10.23772853081212 -6.702734287496168 24.99999964368795 1.3166479150439736 1.041487996793356 0.17190477625999567 0.23596604159362097 112.85941346757089 48061.03663268762 0.04205128143556373 0.08753670513795556 1.9827397458151147e-07 6.702734287496168 -0.2751599182506177 S(ph)YS(ph)PAHNR ddPTM_A549_PD325901_60min_R1 2 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(0.995)Y(0.301)S(0.703)PAHNR;S(0.984)Y(0.038)S(0.978)PAHNR 71.61399999999999 0.0069605000000000005 6948300.0 1410.97 1519.21 1437.51 1519.71 1468.45 1566.1999999999998 1261.9 1512.55 1520.2 1662.8600000000001 2078.4700000000003 True False 1554.2106356987858 1647.2391583679587 1535.068073049859 1613.5790351881722 1365.3111378774845 1553.4453864719549 1309.9222950381754 1482.3810036774794 1456.3112806379033 1557.8667358145378 1822.8313665068924 0.852635446293166 0.9036706239725166 0.8421338919526733 0.8852047780373056 0.7490057297476957 0.85221563278716 0.7186195712378983 0.8132299185295341 0.7989281440930245 0.8546411722110594 1.0 10.831965385832147 -10.707918808689177 0.9299736638973839 1.001653284550709 0.8232878871950874 0.15564883095352144 0.06646914252238134 0.3174761231649139 0.4809966182519189 0.03821116107320332 0.009603397758495792 1.9592109135589022e-11 10.707918808689177 -0.1783653973556215 S(ph)YSCSSPK ddPTM_A549_MK2206_60min_R1 1 SYSCSSPK 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.709)YS(0.29)CS(0.001)SPK 103.7 0.0021194000000000005 10703000.0 2158.8 2628.2 2290.4 1838.8 3312.7 3130.7 2721.8 3112.6 5081.4 4090.2 4918.4 True False 2523.1526624073867 2761.9641540501657 2615.2131604866872 2289.3060825468674 2825.406218307155 3461.98859600953 3216.315828450141 3553.8205819377163 3930.471013328386 3166.2209792327276 3697.025539065607 0.6824818048308893 0.7470773801438844 0.7073830388382064 0.619229177174002 0.7642376793050917 0.936425393719222 0.8699739275436649 0.9612648179963386 1.0631441335192346 0.8564238861149345 1.0 11.852149294364153 -7.554375749751498 1.0029610349287124 1.0271974566769282 0.6886213000957215 0.7189437607515796 0.07254638895948376 0.12052618496695665 0.24324034705249378 0.009767117587873084 0.018720468048995305 2.790128788997374e-08 7.554375749751498 -0.33857615658120666 S(ph)YSFDEIRK ddPTM_A549_MK2206_60min_R1 1 SYSFDEIRK 9 1 P43490 P43490 NAMPT Nicotinamide phosphoribosyltransferase 1 S(0.449)Y(0.101)S(0.449)FDEIRK 44.188 0.025077000000000002 4679000.0 894.47 861.28 730.5 606.25 971.3 767.23 814.72 622.34 1065.0 1039.3 1149.8 True False 1045.4346683081037 905.1154731756817 834.0958844461768 754.7812772155966 828.4230566733293 848.4177693539444 962.7440780935041 710.5586008363168 823.7792004555305 804.5214081748015 864.2729271343599 1.209611727367668 1.0472565375578085 0.9650838968330987 0.8733135720428025 0.9585201973410219 0.9816549179285462 1.1139352487710585 0.8221460820163506 0.9531470610642716 0.9308649882651371 1.0 9.755343160086886 -5.341991411721696 2.381282769852841 0.9676545084544641 1.2434135409861449 0.5262350465500885 0.07043465617420727 0.2749572454179353 2.1082204806133995 0.00934905963254929 0.14394499611700778 4.549970577378264e-06 5.341991411721696 0.27575903253168077 S(ph)YSGGTR ddPTM_A549_MK2206_60min_R1 2 SYSGGTR 7 0 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 S(0.996)YS(0.003)GGTR;S(0.996)Y(0.001)S(0.003)GGTR 78.516 0.016738 13452000.0 2452.4 4825.3 2758.8999999999996 1923.57 4024.3 2669.3 1607.17 2895.2 2990.0 3775.1 4412.5 True False 2866.3051645765568 5070.887159477312 3150.1535052683903 2394.844736352339 3432.330800957976 2951.7635542620624 1899.1719854545574 3305.6034661781405 2312.7697740488584 2922.3022880791837 3316.754471195306 0.8641897341118486 1.5288702264566012 0.9497698827652818 0.7220446243912878 1.0348462120926962 0.8899554006475171 0.5725995101380313 0.9966379769398044 0.6972990597086232 0.8810728419779689 1.0 11.69555650260665 -5.983278002681933 24.91602221788988 0.8511290910258413 1.2072277052809053 0.31618708306700505 0.19505841575279143 184.07593539379417 274272.2034554331 0.025673894474016443 0.07979628451246998 1.0392547001216987e-06 5.983278002681933 0.35609861425506395 S(ph)YSGGTR ddPTM_A549_PD325901_60min_R1 3 SYSGGTR 7 0 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 S(0.99)YS(0.009)GGT(0.001)R;S(0.976)Y(0.004)S(0.02)GGTR;S(0.98)Y(0.001)S(0.005)GGT(0.015)R 72.607 0.019635 20549000.0 3915.3 4754.9 4642.9 4397.2 5222.1 4228.9 3575.9 4238.8 4230.8 4937.9 5939.7 True False 4312.778373708477 5155.612110323003 4957.995114025772 4668.805057234233 4855.317711266989 4194.461240487323 3711.9828313075604 4154.253808725728 4052.994189003315 4626.120151292711 5209.154554860541 0.8279229053943743 0.9897214713110061 0.9517849896389774 0.8962692521529966 0.9320740362246701 0.8052095971261918 0.7125883465761245 0.797490987256174 0.7780522052703467 0.8880750422304491 1.0 12.346833526938452 -4.952269311237649 16.83463784051974 0.8814154448796556 0.48766479421881187 0.018684932152766787 0.08822122908558558 27974342.387069467 239901053.04677796 0.014879930778347874 359997915.286438 1.1161708821265795e-05 4.952269311237649 -0.39375065066084375 S(ph)YSPDGKES(ph)PSDKK ddPTM_A549_MK2206_60min_R1 1 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.479)YS(0.521)PDGKES(0.761)PS(0.239)DKK 131.54 2.7323e-09 106240000.0 7100.2 7828.0 7624.8 6761.4 10164.0 7887.1 6662.9 6993.9 11553.0 11655.0 11758.0 True False 8298.540176776409 8226.411763908647 8706.111293258336 8417.943303530785 8668.889064169382 8721.707686966742 7873.462684025436 7985.3067429204575 8936.263946349987 9022.127405250954 8838.164095708651 0.9389438900331964 0.9307828724183749 0.9850587971641721 0.9524538368345182 0.9808472631073392 0.986823461583107 0.8908482122263804 0.9035028832286225 1.0110995733479273 1.020814651951487 1.0 13.109531002119004 -8.789593286335913 24.99913270983855 1.005241478894935 0.9478199292416963 0.4750466271542012 0.03000519359193205 148.78100400086169 132108.74676829408 0.005392234200372293 0.00574100391585266 1.6233296222716112e-09 8.789593286335913 -0.05742154965323876 S(ph)YSPDGKES(ph)PSDKK ddPTM_A549_PD325901_60min_R1 2 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.407)YS(0.593)PDGKES(0.696)PS(0.304)DKK;S(0.97)YS(0.03)PDGKES(0.677)PS(0.323)DKK 184.6 3.8341000000000004e-26 1596060000.0 23713.6 24235.5 24556.2 24157.9 28810.7 29794.7 26341.0 28367.7 29091.8 27919.2 31391.6 True False 26120.987214970337 26277.91063949466 26222.73140042639 25650.078616428375 26787.135823519253 29552.0618416013 27343.42116934828 27801.883969469873 27869.17281545965 26156.376947279532 27530.632207747905 0.9487972167823718 0.9544971739551737 0.9524928887410935 0.9316923208617676 0.9729938499552723 1.0734247444301155 0.993199900496766 1.0098527254904677 1.0122968700884563 0.9500826842588228 1.0 14.74875011961406 -7.007119176353111 24.88860332576507 1.0100049402249627 0.9483821810871125 0.5057541141241851 0.02752444759692774 137.3191168268575 480070.1104460421 0.002874319782950222 0.005285929238083185 9.837411166845998e-08 7.007119176353111 -0.0616227591378502 S(ph)YSPDGKESPSDKK ddPTM_A549_MK2206_60min_R1 2 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.486)Y(0.007)S(0.486)PDGKES(0.017)PS(0.003)DKK;S(0.485)Y(0.015)S(0.485)PDGKES(0.013)PS(0.003)DKK 49.559 0.009027 10604600.0 1116.3600000000001 1607.69 1207.35 1202.69 1843.92 1310.15 1515.3999999999999 1166.27 2246.23 1689.7200000000003 2431.8 True False 1304.7742756184496 1689.5145540008034 1378.5703847858897 1497.3491039908065 1572.6818106260546 1448.7892033928156 1790.7285643446767 1331.5923440520792 1737.4624914922317 1308.0110784384933 1827.9169457343332 0.7138039168920115 0.9242840917600175 0.7541756139429374 0.8191559838017001 0.8603683084705238 0.7925902797573717 0.9796553221543024 0.7284752992522511 0.9505150086533264 0.7155746772252954 1.0 10.83598480544138 -8.949363060225293 0.6359525487838592 0.9980215497643874 0.8146608483172376 0.0 0.11614246772676375 0.39221497050967313 0.34933832827204914 0.023669812304003175 0.02077817338636971 1.1236652228640954e-09 8.949363060225293 -0.18336070144714978 S(ph)YSPDGKESPSDKK ddPTM_A549_PD325901_60min_R1 2 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.505)Y(0.029)S(0.458)PDGKES(0.007)PS(0.001)DKK;S(0.514)Y(0.015)S(0.47)PDGKES(0.001)PS(0.001)DKK 52.453 0.004485 29560200.0 4052.5 4343.6 3833.8 5131.9 5410.6 4822.5 4901.6 5545.4 5214.9 4873.6 5284.799999999999 True False 4463.906816707178 4709.650415865528 4093.984722512227 5448.885807609468 5030.578121556685 4783.227158894776 5088.133070258436 5434.792646717856 4995.735888303252 4565.880064266223 4634.803103107393 0.9631276059417415 1.0161489735578957 0.8833136233484059 1.1756455854524381 1.0853919809848978 1.032023810393989 1.0978099731673843 1.1726048606194537 1.0778744592092535 0.9851292412411303 1.0 12.178292335874437 -6.248425004607938 24.99833636233165 1.0621428504509847 0.9603919683922104 0.4010313228957545 0.06529810916925403 742.3745721189449 1425968.3809419007 0.009429248246863054 0.024777756968278598 5.643843926742369e-07 6.248425004607938 -0.10175088205877425 S(ph)YSSPDITQAIQEEEK ddPTM_A549_MK2206_60min_R1 2 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.438)Y(0.027)S(0.438)S(0.092)PDIT(0.004)QAIQEEEK;S(0.329)Y(0.006)S(0.329)S(0.329)PDIT(0.008)QAIQEEEK 71.592 0.00033292 2012090.0 612.71 575.39 615.66 699.05 758.78 783.61 585.64 733.35 785.45 1075.57 1192.19 True False 716.1204686787238 604.6748933106023 702.9698456100392 870.3172813815468 647.1644671497883 866.5310900817803 692.043207353053 837.3046082901835 607.5468291059118 832.5979899841932 896.1363202298779 0.799120013900367 0.6747577122591019 0.7844452118955658 0.9711884919007545 0.7221718978913575 0.9669634747752405 0.7722521582157604 0.934349595467124 0.6779625101570074 0.9290974723249853 1.0 9.807574401477531 -11.073911145623386 1.3934044279792805 0.9999379648332646 0.7986501545453237 0.2327771186647677 0.10315263352753726 0.39331104819443663 1.3639092243381967 0.07351196529747468 0.016233358006620055 8.435073172909882e-12 11.073911145623386 -0.20128781028794085 S(ph)YSSPDITQAIQEEEK ddPTM_A549_PD325901_60min_R1 1 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.52)YS(0.411)S(0.068)PDITQAIQEEEK 115.57 5.3211000000000006e-08 1718800.0 727.15 669.15 773.23 789.92 858.31 622.91 863.87 615.35 1147.1 866.39 1116.4 True False 800.9697327004625 725.5416188821288 825.7060376097161 838.7115643615168 798.0252666087532 617.8372274851524 896.7450455778028 603.0763615172635 1098.8913761477038 811.6859875409576 979.0898774426844 0.818075797895634 0.7410367889587356 0.8433403884905885 0.8566236702928376 0.8150684477436745 0.6310321878711491 0.9158965547882482 0.6159560786109418 1.122360062610322 0.829020916507712 1.0 9.93529749065498 -8.775214027819075 24.999718515377438 1.0577811580909642 0.7838029174408503 0.34434741616231523 0.11346979557005317 97.47918727046088 176915.1345537521 0.015352987671870554 0.016385669968819832 1.677976878347844e-09 8.775214027819075 -0.2739782406501139 S(ph)YSVVASEYDK ddPTM_A549_PD325901_60min_R1 1 SYSVVASEYDK 11 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.749)YS(0.25)VVASEYDK 117.2 1.7847e-05 6595300.0 3220.3 3376.0 3618.2 3581.5 4359.0 3925.3 3567.2 4398.9 3447.1 4471.2 4058.8 True False 3547.2224853404387 3660.5073680730316 3863.7528100041036 3802.721120823344 4052.838877733634 3893.3336582290694 3702.9517480467393 4311.160488629706 3302.2303746131556 4188.887668940232 3559.59333085307 0.9965246463955851 1.0283498781575078 1.0854478168937745 1.0683021253756557 1.1385679489298166 1.093757993218854 1.040273818908216 1.211138489125251 0.9276987755850649 1.176788267534019 1.0 11.797496713192437 -8.79891096836163 24.999986793528088 0.9658577369429654 1.0813931208764826 0.0 0.08488716717861941 106.62505541112513 71136.76326802513 0.009995696044980672 0.010641358993519243 1.5888724387076358e-09 8.79891096836163 0.11553538393351725 S(ph)YTLVVAK ddPTM_A549_MK2206_60min_R1 2 SYTLVVAK 8 0 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 S(0.999)YT(0.001)LVVAK;S(0.999)YT(0.001)LVVAK 116.3 8.0685e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 S(ph)YTLVVAK ddPTM_A549_PD325901_60min_R1 2 SYTLVVAK 8 0 O43491;O43491-4;E9PHY5;E9PK52;O43491-3;O43491-2;A0A2R8Y5B3;E9PII3;E9PQN0;E9PJP4;E9PQD2;E9PIG0;E9PRG1 O43491 EPB41L2 Band 4.1-like protein 2 1 S(0.999)YT(0.001)LVVAK;S(0.999)YT(0.001)LVVAK 127.4 0.0010627 17221200.0 5640.9 5541.9 6000.6 5364.1 7289.799999999999 5814.8 5647.0 6120.4 5916.6 6755.700000000001 5914.9 True False 6213.5600153889 6008.935362299745 6407.836800539115 5695.428274245008 6777.789596444744 5767.446196690795 5861.899675156971 5998.323820639083 5667.945877530737 6329.143949065029 5187.404797640388 1.1978166844074483 1.158370244217889 1.2352683182646298 1.0979340337649581 1.306585828722636 1.1118172615551907 1.1300254951808257 1.1563246082834253 1.0926361251215508 1.220098333552837 1.0 12.340797239048543 -9.216790770646655 0.41933891891667135 0.9946241502702108 1.1977046782777567 0.0 0.08364463407221513 0.43608052333624986 0.19071791570049618 0.03287761121175359 0.02069021566298156 6.070287063964798e-10 9.216790770646655 0.20308052800754595 S(ph)YTPSK ddPTM_A549_MK2206_60min_R1 2 SYTPSK 6 0 O60493-4;O60493;O60493-2 O60493-4 SNX3 Sorting nexin-3 1 S(0.816)YT(0.182)PS(0.001)K;S(0.869)YT(0.13)PS(0.001)K 84.743 0.040326999999999995 55436000.0 14336.9 15984.300000000001 12012.0 13593.0 18214.7 15275.9 13669.9 16480.2 20447.0 22974.0 21346.5 True False 16756.618216448223 16797.832595534623 13715.482223090314 16923.28561021296 15535.341758867193 16892.38559867824 16153.54388394834 18816.318818495783 15815.787147149515 17784.157443864045 16045.574916571255 1.0443139808684967 1.046882563128758 0.8547828478819721 1.0547011059563367 0.9682010049277129 1.0527753406474973 1.0067288936631107 1.1726796276438192 0.9856790566485453 1.108352772420591 1.0 13.969887862184239 S(ph)YTPSK ddPTM_A549_PD325901_60min_R1 2 SYTPSK 6 0 O60493-4;O60493;O60493-2 O60493-4 SNX3 Sorting nexin-3 1 S(0.835)YT(0.16)PS(0.004)K;S(0.837)YT(0.161)PS(0.002)K 88.35799999999999 0.038455 81170000.0 21550.9 22151.2 22793.3 21566.4 26781.0 22710.9 24015.9 23190.8 23849.2 24588.0 25665.0 True False 23738.731503065937 24017.95936364317 24340.19040524751 22898.507547151905 24899.994949434364 22525.949960174912 24929.838216504744 22728.24130116933 22846.901061827055 23035.509483785656 22508.36770383955 1.054662506647095 1.0670680201988219 1.0813840757140059 1.0173331024464205 1.106255028221653 1.0007811431093852 1.107580902557058 1.0097685269861782 1.0150403335524751 1.0234198137724657 1.0 14.458173816574206 -8.397152582319944 10.626820995066224 1.007382698346947 1.0606820491877618 0.37199754842650035 0.03107157802248503 0.287384793675106 23.45148170266005 0.004413583783653957 0.005335532982861406 4.007259043476631e-09 8.397152582319944 0.05329935084081483 S(ph)YTTPKK ddPTM_A549_MK2206_60min_R1 2 SYTTPKK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 S(0.789)Y(0.002)T(0.188)T(0.02)PKK;S(0.404)Y(0.003)T(0.342)T(0.251)PKK 77.67699999999999 0.0071598 115455000.0 16440.1 16003.8 14335.4 13970.7 19759.7 17085.6 15293.3 19286.7 20119.1 25452.0 23450.3 True False 19214.786958145094 16818.32506224339 16368.375279794289 17393.52212716855 16853.07430551631 18893.586851496613 18071.894650318365 22020.64878804156 15562.155973600804 19702.375522818304 17626.94331464507 1.0900804873060885 0.9541260082382038 0.9285997570659277 0.9867577047642411 0.9560973791476484 1.0718583769313637 1.0252426826211902 1.2492607705696794 0.8828618607215485 1.117742036785748 1.0 14.105494698385764 S(ph)YTTPKK ddPTM_A549_PD325901_60min_R1 1 SYTTPKK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 S(0.933)YT(0.034)T(0.034)PKK 86.13600000000001 0.0055577 149770000.0 10945.0 10774.0 12445.0 10931.0 12733.0 10156.0 10352.0 10815.0 10496.0 11991.0 10802.0 True False 12056.128342716851 11681.96279135629 13289.592537864437 11606.18304389779 11838.678006465332 10073.29290321107 10745.95102483176 10599.286340796636 10054.889620823205 11233.88621360314 9473.422479519773 1.2726264841223465 1.2331301403068506 1.4028290796272092 1.2251309459689728 1.2496727589272951 1.063321405224789 1.1343261686115043 1.118844468692368 1.0613787828591497 1.185831861493483 1.0 13.209670009428265 -7.477857373775902 0.5245850027829215 1.0173415859266575 1.319909248176374 0.5319569734412379 0.07545067202010901 0.3008423755010868 0.16134622192924633 0.013980337891477209 0.03732545713328699 3.327688196320998e-08 7.477857373775902 0.30256766224971643 S(ph)YVTTSTR ddPTM_A549_MK2206_60min_R1 2 SYVTTSTR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.998)YVT(0.002)TSTR;S(0.996)YVT(0.003)TSTR 146.88 0.00080111 352790000.0 9810.4 10195.7 8942.2 8992.1 15192.5 11461.0 9192.599999999999 10768.2 16061.099999999999 14795.1 12502.7 True False 11466.155678748099 10714.617580644272 10210.338422853667 11195.164903670715 12957.703375383062 12673.795412803916 10862.776429058255 12294.625326229443 12423.286494306405 11452.876634356793 9397.934533034238 1.2200718826508052 1.1401034496443683 1.0864449403178738 1.191236740830564 1.3787820429942395 1.348572430277616 1.1558684933242531 1.3082263217532728 1.3219166882507953 1.218658907880165 1.0 13.198128002476045 -10.882454380439473 1.1236512876773213 0.9995764977729884 1.2432775518466648 0.05985909678011869 0.10830597735504136 0.3616456361696961 0.8084995156999351 0.06870671583846887 0.016413255098526463 1.3108277283067063e-11 10.882454380439473 0.24370105407367637 S(ph)YVTTSTR ddPTM_A549_PD325901_60min_R1 2 SYVTTSTR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 S(0.988)YVT(0.012)TSTR;S(0.993)YVT(0.001)TS(0.002)T(0.004)R 135.43 0.0010827999999999999 422480000.0 10648.099999999999 10618.2 11876.0 11443.2 13125.900000000001 11159.0 12376.7 13083.5 12764.900000000001 13911.3 12187.8 True False 11729.08727328309 11513.032978576139 12681.976776189478 12150.020474607187 12203.98206589674 11068.124803754654 12847.70209129011 12822.539328692803 12228.435644135488 13032.938143882688 10688.777864829763 1.0973272549592736 1.0771140652532873 1.1864758475258537 1.1367081090332583 1.1417565431921444 1.0354902069929894 1.2019804559288343 1.199626326867915 1.144044323754898 1.2193104121628464 1.0 13.383809286944217 -10.593108830872008 0.9135222175198965 1.001166510459218 1.1358184871442756 0.0 0.08048710406714588 0.3721561366731752 0.5620072226000744 0.03212263044132156 0.009152650443344148 2.5520616954031325e-11 10.593108830872008 0.13465197668505757 SAAAGALGS(ph)PGLPLRK ddPTM_A549_PD325901_60min_R1 2 SAAAGALGSPGLPLRK 16 1 O75145-2;O75145;A0A0C4DGR8;A0A0C4DGR7 O75145-2 PPFIA3 Liprin-alpha-3 1 SAAAGALGS(1)PGLPLRK;SAAAGALGS(1)PGLPLRK 125.18 1.2377e-08 19355600.0 7179.5 8164.2 7646.3 7426.3 8572.1 8863.8 7955.5 8913.7 9314.5 8542.9 8879.3 True False 7908.357554731444 8852.225786262394 8165.223898937145 7885.005684649 7970.0252681395905 8791.616151583527 8258.250905916642 8735.90926083763 8923.043957046275 8003.499836059563 7787.202390520262 1.0155582400630385 1.136765855352448 1.0485439429283445 1.0125594904593462 1.023477350202415 1.128982619263368 1.0604900825448957 1.1218289730689772 1.1458600290020364 1.0277760143748942 1.0 12.926889407270634 -7.214468370214095 24.997736482273798 1.0779522543491586 1.0504768994741511 0.09277055933260814 0.051235119338689725 1274.877041837282 678483.1000876176 0.009395024970182096 0.01627258426589244 6.102835021405401e-08 7.214468370214095 -0.02747535487500752 SAADS(ph)ISESVPVGPK ddPTM_A549_MK2206_60min_R1 1 SAADSISESVPVGPK 15 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 SAADS(0.5)IS(0.5)ESVPVGPK 242.57 1.0206999999999998e-64 19810000.0 5624.8 5430.0 6937.0 6176.7 9369.6 7394.8 6831.0 6889.0 10657.0 10588.0 10546.0 True False 6574.128726843184 5706.363806594781 7920.770910887239 7689.991777282597 7991.344251834073 8177.312827729027 8072.104278103794 7865.536846677675 8243.206515732008 8196.163446314642 7927.137145206961 0.8293194133544346 0.7198517828148159 0.9991969062470969 0.9700843616578841 1.0080996588618294 1.0315593988017897 1.018287451098848 0.9922291872335612 1.0398718181274504 1.0339373844781208 1.0 12.952584220940578 -5.771842100615428 24.77286066605104 1.0132720823633767 0.7745856106152472 0.8991472382376817 0.030443330002956945 30.650371324257442 72991.03582279194 0.0040079978856244845 0.012660684852150966 1.6910556484371597e-06 5.771842100615428 -0.23868647174812951 SAADS(ph)ISESVPVGPK ddPTM_A549_PD325901_60min_R1 1 SAADSISESVPVGPK 15 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 SAADS(0.975)IS(0.025)ESVPVGPK 261.79 2.1974e-90 28369000.0 16211.0 15956.0 16313.0 16889.0 18704.0 18161.0 17698.0 18386.0 18166.0 17338.0 20044.0 True False 17856.72878609254 17300.66811758687 17420.098278037953 17932.195172298034 17390.295565297052 18013.10283726035 18371.507074717192 18019.276806462018 17402.54619396669 16243.2757210784 17578.71506938476 1.0158153605431588 0.9841827488129584 0.9909767698764822 1.0201084152919058 0.9892813835741691 1.0247110079525734 1.0450995423842533 1.0250622264106517 0.9899782848335207 0.9240308894572065 1.0 14.101541998905851 -4.846414211639438 18.17816442778682 1.0023198859730063 9.37518541987866 0.015438769399640728 0.03027089167838832 915.7471705791135 109198.5196981782 0.0027565162937161084 2399.4462908626892 1.4242485578000545e-05 4.846414211639438 8.372865533905653 SAADSIS(ph)ESVPVGPK ddPTM_A549_MK2206_60min_R1 3 SAADSISESVPVGPK 15 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 SAADS(0.005)IS(0.983)ES(0.012)VPVGPK;SAADS(0.322)IS(0.678)ESVPVGPK;SAADS(0.012)IS(0.988)ESVPVGPK 241.41 1.2338999999999998e-64 26795800.0 10302.9 12467.4 11696.8 10499.9 15392.900000000001 12401.2 11394.9 11839.0 18888.5 18119.6 17972.0 True False 12041.777638279153 13101.937407429066 13355.58212346345 13072.37597135842 13128.624800851336 13713.486752749674 13465.205832025309 13517.214505416907 14610.284908736414 14026.369775391257 13509.05639803333 0.8913855478486428 0.9698632547967204 0.9886391565740873 0.9676749867786115 0.9718387734884741 1.015132837460513 0.996753987494315 1.0006038991283481 1.0815177965252556 1.0382938202429326 1.0 13.721639286084184 -4.780253487361735 0.36816626056646173 1.03557298447805 0.7714445487919869 0.6379864148780494 0.02719155700928843 4.703224097402022 0.3316177236285275 0.009756959718082416 0.5906406185545879 1.658618528661337e-05 4.780253487361735 -0.26412843568606303 SAADSIS(ph)ESVPVGPK ddPTM_A549_PD325901_60min_R1 2 SAADSISESVPVGPK 15 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 SAADS(0.001)IS(0.996)ES(0.003)VPVGPK;SAADS(0.462)IS(0.538)ESVPVGPK 264.97 1.6684999999999994e-90 55990900.0 17902.9 15841.8 15978.5 18681.6 20912.8 20229.7 18253.5 18700.6 19253.5 20388.5 21360.9 True False 19720.3892285816 17176.844082801945 17062.897096526052 19835.520003008045 19443.95707324339 20064.956030335663 18948.146931198462 18327.601862663105 18444.34235084981 19101.166630476826 18733.644717901687 1.0526723190035194 0.9168981445659595 0.9108156663300503 1.0588179877273651 1.0379163994000022 1.0710652589221887 1.0114501057603489 0.9783254747619629 0.9845570698383416 1.019618281338705 1.0 14.193343989482985 -6.25533875446339 24.98284686400604 1.005241253061603 0.9558056585335878 0.21042346568934156 0.04534413104764475 652.3463084632835 2671430.576591099 0.006398444494444844 0.016425178287694076 5.5547081491412e-07 6.25533875446339 -0.04943559452801527 SAAEMYGS(ph)SFDLDYDFQR ddPTM_A549_MK2206_60min_R1 3 SAAEMYGSSFDLDYDFQR 18 0 G3V4C1;G3V5X6;G3V3K6;G3V251;P07910-2;B2R5W2;G3V2D6;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SAAEMY(0.021)GS(0.953)S(0.026)FDLDYDFQR;SAAEMY(0.002)GS(0.972)S(0.026)FDLDYDFQR;S(0.001)AAEMY(0.005)GS(0.919)S(0.076)FDLDYDFQR 88.133 2.5531e-06 6361310.0 3126.6 2807.3399999999997 2666.35 2426.96 3151.01 2599.16 2237.07 2887.2799999999997 4531.4 4302.71 3693.66 True False 3654.2936419691164 2950.221614881362 3044.4785236044677 3021.565308950374 2687.5006031177054 2874.2013860172265 2643.516661896889 3296.560781924157 3505.0451351588626 3330.7248226381244 2776.4222821700314 1.3161879824393814 1.0625983063986542 1.096547359944441 1.0882945754882576 0.9679725668449738 1.0352176628444185 0.9521306174760764 1.1873412784122985 1.2624322883690966 1.199646337672688 1.0 11.439011297124361 -5.255616668172712 23.775149030493772 1.0972123795587385 1.3161881752477516 0.32388256330104004 0.09450199671655612 375.6336789339791 1533682.8805005208 0.015790637508383037 0.19059146846641678 5.551154717578288e-06 5.255616668172712 0.21897579568901304 SAAEMYGS(ph)SFDLDYDFQR ddPTM_A549_PD325901_60min_R1 3 SAAEMYGSSFDLDYDFQR 18 0 G3V4C1;G3V5X6;G3V3K6;G3V251;P07910-2;B2R5W2;G3V2D6;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SAAEMY(0.009)GS(0.495)S(0.495)FDLDYDFQR;SAAEMY(0.007)GS(0.804)S(0.189)FDLDYDFQR;SAAEMYGS(0.5)S(0.5)FDLDYDFQR 174.52 1.7707e-30 9650800.0 3994.7 4363.9 4124.0 4147.8 5380.8 4403.200000000001 4843.299999999999 4572.6 5198.3 5352.400000000001 5272.5 True False 4400.239003257286 4731.6611681083805 4403.879439626593 4404.000185662728 5002.871170752267 4367.341799076309 5027.614431855454 4481.395905864692 4979.833528575195 5014.448550553703 4624.0159251312725 0.9516055036364015 1.0232796003993114 0.9523927925273246 0.9524189053344796 1.081932080631889 0.9444910808676169 1.0872831134794856 0.9691566764527241 1.076949908738435 1.0844358306165103 1.0 12.174930651157329 -6.741594357963155 24.999698372933963 1.0314349686968287 0.9724830502089095 0.28409262226323695 0.04935770846947118 258.524534365834 325673.71997697814 0.006576020857232574 0.013673836330057296 1.8130327204614948e-07 6.741594357963155 -0.05895191848791925 SAAETVTK ddPTM_A549_MK2206_60min_R1 2 SAAETVTK 8 0 P61604;B8ZZL8;S4R3N1 P61604;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 ; 140.5 0.0030021 26229000.0 10966.0 12364.0 12003.8 11592.599999999999 15519.4 11430.2 11041.5 11228.4 16118.1 16957.9 16439.6 False True 12816.792707040659 12993.274789086165 13706.119339787849 14432.78752041158 13236.516818424858 12639.736177247312 13047.597626509003 12820.060085532827 12467.376085316697 13127.098612226948 12357.19361012178 1.03719283774452 1.0514745660732685 1.1091611713974574 1.1679664473808746 1.071158811300231 1.0228646225057203 1.0558706157862343 1.037457248790851 1.0089164642613244 1.062304195143025 1.0 13.593063515633629 -7.969774779046244 0.8934404856211254 1.0033856202608455 1.0881994850029246 0.25528560487950014 0.03928390638208545 0.3426174370042969 0.5480262776470832 0.007339707167106165 0.011474013913056812 1.0720751289842112e-08 7.969774779046244 0.08481386474207908 SAAETVTK ddPTM_A549_PD325901_60min_R1 2 SAAETVTK 8 0 P61604;B8ZZL8;S4R3N1 P61604;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 ; 140.5 0.0030346 39572000.0 12873.900000000001 12666.0 13527.7 13342.6 14949.2 15067.9 13639.400000000001 14748.9 13524.099999999999 13975.400000000001 16517.4 False True 14180.848850735736 13733.408271330869 14445.771070668432 14166.742098756811 13899.219763940275 14945.192018146321 14158.45483076607 14454.721619211787 12955.729108324615 13092.99085894331 14485.864512425462 0.9789439103597791 0.9480558277727117 0.9972322368663162 0.9779700815650375 0.9595022618096432 1.0317086705682539 0.9773979881298385 0.9978501184249678 0.8943704462520444 0.9038460112416906 1.0 13.82235816637186 SAAGS(ph)EKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK ddPTM_A549_PD325901_60min_R1 1 SAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK 37 2 O00267;O00267-2;M0R2M5 O00267 SUPT5H Transcription elongation factor SPT5 1 S(0.282)AAGS(0.717)EKEEEPEDEEEEEEEEEY(0.001)DEEEEEEDDDRPPK 65.609 0.00011522 8647200.0 567.79 1080.8 630.06 778.1 612.3 739.71 764.67 984.51 660.42 705.63 923.77 True False 625.4316228150941 1171.8828090679294 672.8196604585668 826.1614698066852 569.2941603203267 733.6860470100689 793.7699352934798 964.8731757168464 632.6648440724141 661.0764013764309 810.1521462605058 0.7719927987625 1.4464971974426006 0.8304855619579146 1.019760885186906 0.7027003050575998 0.9056151371030879 0.979778846427004 1.1909777443292606 0.7809210245170166 0.8159904339299999 1.0 9.662049060788236 SAAKS(ph)PVDIVTGGISPVR ddPTM_A549_PD325901_60min_R1 1 SAAKSPVDIVTGGISPVR 18 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2;H0Y9N9;H0YAC6 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 S(0.315)AAKS(0.675)PVDIVT(0.01)GGISPVR 52.91 0.0038758000000000004 2289100.0 1412.7 1501.1 1690.4 1413.2 1625.9 1465.2 1488.2 1335.3 1517.0 1559.1 1944.3 True False 1556.116264025227 1627.602965110908 1805.120709200968 1500.4901543899339 1511.7023930504963 1453.2678969855126 1544.8342653742866 1308.6663939774148 1453.2457655096032 1460.6581599223284 1705.1634259331868 0.9125906880002481 0.9545143534967434 1.0586203537722945 0.8799685306226639 0.8865439934141123 0.852274846436013 0.9059743141797938 0.7674727091106939 0.8522618673422951 0.8566088960786573 1.0 10.735694301028548 -4.8329170852834356 14.321396537974978 0.9162844609306772 0.001588497968022915 0.0 0.07683583308267658 42930298.8756323 6976741.751816216 0.011699564093902708 1287254702.2935777 1.4692067491632592e-05 4.8329170852834356 -0.9146959629626542 SAAPS(ph)SPGSPRPALPATPPATPPAASPSALK ddPTM_A549_PD325901_60min_R1 1 SAAPSSPGSPRPALPATPPATPPAASPSALK 31 1 Q9H211;H3BSY1 Q9H211 CDT1 DNA replication factor Cdt1 1 SAAPS(0.492)S(0.427)PGS(0.081)PRPALPATPPATPPAASPSALK 132.6 2.2628e-28 9870300.0 3380.3 2754.0 3203.3 2646.5 4378.3 3814.6 3776.3 3747.9 4041.0 3633.8 3847.6 True False 3723.4655675546614 2986.089245163839 3420.695201007724 2809.968294362412 4070.7833123150194 3783.535162326601 3920.009162970652 3673.1451943293296 3871.1708229560395 3404.3612478518116 3374.369591945962 1.1034551687645395 0.8849324781408412 1.0137286707337374 0.832738743577266 1.2063833558811332 1.1212568923562038 1.1617011877795005 1.0885426430751668 1.1472278650791117 1.0088880767469677 1.0 11.720402284151698 -6.763956977292836 24.999569577703603 1.0914471968150559 0.9573733207520867 0.39121430835918725 0.08667097384384803 58.35074450198925 579427.9324193479 0.012817726551697418 0.025045383727202532 1.722039157666577e-07 6.763956977292836 -0.13407387606296917 SAAPSQLQGNS(ph)FKKPK ddPTM_A549_PD325901_60min_R1 1 SAAPSQLQGNSFKKPK 16 2 E5RJF7;E5RI14;E5RHN9;Q9Y620-2;Q9Y620 E5RJF7 RAD54B DNA repair and recombination protein RAD54B 1 SAAPS(0.002)QLQGNS(0.998)FKKPK 52.784 0.0034681999999999994 2549200.0 1145.4 1145.2 1331.8 1311.9 1921.0 1575.9 1543.2 1366.2 1389.3 1556.5 1303.7 True False 1261.6801648010864 1241.71002307975 1422.183956763989 1392.933083458926 1786.0755870902292 1563.06639288798 1601.9273204714427 1338.950069236834 1330.912552420892 1458.2223243660474 1143.3531648352084 1.1034912077957404 1.0860249144967538 1.24387109819123 1.2182876877414246 1.5621381407097048 1.3670897505350108 1.4010783104818962 1.1710730423611648 1.1640432662052558 1.2753909896040048 1.0 10.159055384153548 -9.378867112671502 0.9030047576011861 1.0334935339252938 1.2785271193777925 0.042791636371230846 0.1497978816897394 0.4142644021090314 0.7179929958214963 0.041542358783262505 0.030962740109860363 4.1795823577497406e-10 9.378867112671502 0.24503358545249876 SAAPSS(ph)PGSPRPALPATPPATPPAASPSALK ddPTM_A549_MK2206_60min_R1 1 SAAPSSPGSPRPALPATPPATPPAASPSALK 31 1 Q9H211;H3BSY1 Q9H211 CDT1 DNA replication factor Cdt1 1 S(0.005)AAPS(0.177)S(0.659)PGS(0.158)PRPALPAT(0.002)PPATPPAASPSALK 82.241 1.7412e-06 6073800.0 1179.0 1709.0 1445.7 1397.1 1824.0 1575.3 1044.3 1561.9 2674.0 2392.5 2115.3 True False 1377.986376217485 1795.9808002708082 1650.7219988279787 1739.3895627182017 1555.692016238189 1741.9972004004908 1234.0357923618487 1783.304108118141 2068.343269500553 1852.032588336587 1590.012630689957 0.8666512137199395 1.1295387002626986 1.0381816892307818 1.0939470096935175 0.9784148793605022 1.0955870203651041 0.7761169745087882 1.1215660012362976 1.3008344899769968 1.1647911171202026 1.0 10.634822510650578 -8.495660139456929 24.986842235043937 1.145699669948253 1.0060237391261269 0.2749920856770194 0.11706483137339685 941.1633584579932 863995.3148587227 0.022763203029286326 0.027482714714114787 3.194036395506307e-09 8.495660139456929 -0.13967593082212604 SAAPSSPGS(ph)PRPALPATPPATPPAASPSALK ddPTM_A549_MK2206_60min_R1 1 SAAPSSPGSPRPALPATPPATPPAASPSALK 31 1 Q9H211;H3BSY1 Q9H211 CDT1 DNA replication factor Cdt1 1 S(0.005)AAPS(0.159)S(0.367)PGS(0.468)PRPALPATPPATPPAASPSALK 101.25 1.0786e-14 6452700.0 1124.9 1392.7 1382.7 1324.5 2064.7 1637.0 1345.3 1510.6 2634.3 2724.9 1962.0 True False 1314.755618835496 1463.582481297339 1578.787651504078 1649.0025594590638 1760.9853650915506 1810.2262534473439 1589.7235961547412 1724.7321760184784 2037.6352561126785 2109.343197474761 1474.7812515547184 0.8914919534334174 0.9924064872362774 1.070523272410546 1.1181336606501342 1.1940654678347145 1.2274540726219556 1.0779385718925096 1.1694833889434524 1.3816525359029332 1.4302753003206987 1.0 10.526285265779984 -5.661181510817564 0.9986457865056984 1.1800508421430236 0.8387346394855005 0.43651442606949886 0.11681354648778706 1.0236258128054407 1.1707713900956698 0.020677756170503634 0.31978701538865256 2.18181784335857e-06 5.661181510817564 -0.34131620265752305 SAAPSSPGS(ph)PRPALPATPPATPPAASPSALK ddPTM_A549_PD325901_60min_R1 1 SAAPSSPGSPRPALPATPPATPPAASPSALK 31 1 Q9H211;H3BSY1 Q9H211 CDT1 DNA replication factor Cdt1 1 S(0.004)AAPS(0.33)S(0.292)PGS(0.373)PRPALPAT(0.002)PPATPPAASPSALK 109.05 4.013800000000001e-15 13390000.0 2498.0 2480.9 2809.5 2713.9 3296.6 3185.8 3059.7 3079.5 2753.9 3251.5 3274.3 True False 2751.595121069594 2689.974149719308 3000.1695648959535 2881.5314392859063 3065.058188652601 3159.8559010486233 3176.1385578320837 3018.0769566789854 2638.163159945221 3046.1997350955385 2871.5818574978334 0.9582158049526087 0.9367569107234958 1.0447793981781754 1.0034648435189455 1.067376220061285 1.100388586450389 1.1060588607422208 1.0510154703752033 0.9187142456193108 1.0608089500014668 1.0 11.487629972530188 -8.74790634524946 24.935746121708423 0.9616150588565623 1.0354331098466862 0.01297583618337561 0.06062742472614835 243.04755087730592 447834.9990391846 0.010379332848499399 0.011737444076865168 1.786872868925083e-09 8.74790634524946 0.07381805099012395 SAAQAAAQTNSNAAGK ddPTM_A549_MK2206_60min_R1 1 SAAQAAAQTNSNAAGK 16 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 76.655 0.00038479 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SAAQAAAQTNSNAAGK ddPTM_A549_PD325901_60min_R1 2 SAAQAAAQTNSNAAGK 16 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ; 223.72 2.4011000000000002e-54 5126800.0 2823.8 2428.47 2408.4 2124.7 2523.2 2876.3 2944.8999999999996 2638.3 2503.7 2599.8 2889.0 False True 3110.470097228309 2633.125689616205 2571.848506885713 2255.9378934561923 2345.9791365674464 2852.876366434225 3056.9697810111147 2585.6770367936892 2398.478195851283 2435.648184315355 2533.671314879893 1.227653357782029 1.0392530689171204 1.0150679339429747 0.8903830106957396 0.9259208654215891 1.1259851858761971 1.2065376290357648 1.0205258360105252 0.9466414138903337 0.9613118205234981 1.0 11.30701366504089 -5.233026950498176 2.3930459826001673 0.9961787038075659 1.29187976610768 0.3329490236276005 0.08624445348526313 0.5511147324647785 3.54244440272021 0.012868516594810439 0.34498848027562967 5.847537956449693e-06 5.233026950498176 0.29570106230011406 SAAQPS(ph)TSPAEVQSLKK ddPTM_A549_MK2206_60min_R1 1 SAAQPSTSPAEVQSLKK 17 1 Q14789;Q14789-2;Q14789-4;Q14789-3 Q14789 GOLGB1 Golgin subfamily B member 1 1 S(0.006)AAQPS(0.39)T(0.328)S(0.277)PAEVQSLKK 55.763000000000005 0.0043992 5908900.0 1937.6 2122.5 1639.1 1741.2 3277.7 2268.2 2094.0 2027.3 3138.9 2978.5 3284.5 True False 2264.619510228158 2230.526184069506 1871.5490269619831 2167.794078165439 2795.5546719429353 2508.2194184906957 2474.4526948249677 2314.675983345865 2427.9441617933 2305.6547813419106 2468.8680024115556 0.9172703878927952 0.9034610930559104 0.7580595743206523 0.8780518343013753 1.1323224527241946 1.015939052246091 1.0022620457667064 0.9375454585198245 0.983424046737905 0.9338914754007827 1.0 11.26963398977102 -6.552681490721041 24.988807849254467 0.9987400420069288 0.8563287699320445 0.5319880120556989 0.061740603444211166 106.45950969990591 89263.13895572958 0.008159835946653525 0.016986215184671232 2.8010348306741843e-07 6.552681490721041 -0.14241127207488424 SAAQPS(ph)TSPAEVQSLKK ddPTM_A549_PD325901_60min_R1 1 SAAQPSTSPAEVQSLKK 17 1 Q14789;Q14789-2;Q14789-4;Q14789-3 Q14789 GOLGB1 Golgin subfamily B member 1 1 SAAQPS(0.381)T(0.309)S(0.309)PAEVQSLKK 75.122 0.00020533 4256500.0 2685.2 2123.1 2574.0 2811.9 3109.2 3290.9 3184.6 2530.2 2979.1 2762.3 3307.8 True False 2957.7995272602384 2302.0210880200984 2748.687118719408 2985.5846767117578 2890.8205181576996 3264.1000014944157 3305.791695679988 2479.733176096498 2853.898787099314 2587.8879065829337 2900.9615698718303 1.0195927991527718 0.7935372574142049 0.9475089733232315 1.029170709367124 0.9965042447237318 1.1251786426245658 1.1395503235935813 0.8547969755442355 0.983776833426099 0.8920793482615046 1.0 11.50231546840118 -6.002161456000876 24.970103874411805 1.004074064091928 0.8975545497253653 0.14270411773029856 0.09277306237789816 98.5948152380852 1139073.247080773 0.011414235267633068 0.034690608585311006 9.950354280601927e-07 6.002161456000876 -0.1065195143665626 SAAS(ph)PVVSSMPER ddPTM_A549_MK2206_60min_R1 3 SAASPVVSSMPER 13 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 SAAS(0.987)PVVS(0.004)S(0.009)MPER;S(0.001)AAS(0.972)PVVS(0.013)S(0.013)MPER;S(0.001)AAS(0.998)PVVS(0.001)SMPER 110.25 1.9584e-05 57758000.0 8656.8 10341.400000000001 9500.0 8698.800000000001 12010.400000000001 9599.699999999999 9495.5 9236.0 13570.4 13620.2 14689.300000000001 True False 10117.856201560247 10867.733088309264 10847.242850429406 10830.006390503979 10243.686070080672 10615.533882234868 11220.709438257147 10545.231284063733 10496.726067475807 10543.387360360275 11041.541405944301 0.9163445419054643 0.984258690771067 0.982402950061819 0.9808418944725923 0.9277405838070673 0.9614177488407472 1.0162267228574073 0.9550506488511309 0.9506576737397201 0.9548836500929263 1.0 13.4306539668362 -7.573760704251494 24.999938604050538 0.9773557627201636 0.960570955812892 0.07928022523979128 0.027338749856672825 232.45021735900735 114209.2887898017 0.004457886620251036 0.006612114582403687 2.6683285054107257e-08 7.573760704251494 -0.016784806907271577 SAAS(ph)PVVSSMPER ddPTM_A549_PD325901_60min_R1 4 SAASPVVSSMPER 13 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 SAAS(0.999)PVVS(0.001)SMPER;S(0.016)AAS(0.933)PVVS(0.035)S(0.016)MPER;S(0.008)AAS(0.977)PVVS(0.008)S(0.008)MPER;S(0.006)AAS(0.741)PVVS(0.127)S(0.127)MPER 117.63 5.3118e-06 94381000.0 19966.899999999998 18561.7 20465.9 21150.4 26031.5 22843.4 20598.699999999997 22216.0 23950.9 23663.5 26265.800000000003 True False 21993.9249891451 20125.959601291823 21854.839045454373 22456.812171956444 24203.137243799756 22657.37092410514 21382.59480054114 21772.88445188516 22944.32696449834 22169.382571561826 23035.273112624564 0.9547933242037947 0.8737018008378515 0.9487553691506593 0.9748880363675353 1.0506989487585081 0.9835946295634622 0.9282544511626534 0.9451975822223897 0.9960518745455473 0.9624102333482566 1.0 14.491557082587873 -6.134133834207338 3.064993264296877 0.9909324512533454 0.9139877299205175 0.3018231847813452 0.036008507030772643 0.18258149795878137 3.2419036320609074 0.005000436221384633 0.015254068974680764 7.342875518206021e-07 6.134133834207338 -0.07694472133282793 SAASREDLVGPEVGAS(ph)PQSGRK ddPTM_A549_PD325901_60min_R1 1 SAASREDLVGPEVGASPQSGRK 22 2 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 SAASREDLVGPEVGAS(0.987)PQS(0.013)GRK 83.21600000000001 1.2478e-05 9885900.0 1790.1 2192.0 2428.2 2728.2 2199.3 2693.3 2724.0 2679.1 2780.3 2626.0 3206.1 True False 1971.829634198031 2376.72753282467 2592.992253952784 2896.7147178082473 2044.828755173109 2671.36665776077 2827.663310629997 2625.6632487867078 2663.453659753693 2460.1939118440355 2811.770025142412 0.7012769951191725 0.8452780673996595 0.922192153258143 1.0302103983989703 0.7272389764769405 0.9500658424671374 1.005652413015812 0.9338115227449022 0.9472516016379373 0.8749627067097816 1.0 11.457262885774348 -3.94969642540703 0.482847112000674 0.9695491611581141 4.822836286188593e-59 0.3679929682991462 0.08210137606339217 8.62010796742 0.5162921866590034 0.014592121504762037 6.343880078000176 0.00011228030264850892 3.94969642540703 -0.9695491611581141 SAAVETASLS(ph)PSLVPAR ddPTM_A549_MK2206_60min_R1 2 SAAVETASLSPSLVPAR 17 0 Q2KHT3;Q2KHT3-3 Q2KHT3 CLEC16A Protein CLEC16A 1 SAAVETASLS(0.5)PS(0.5)LVPAR;SAAVETASLS(0.5)PS(0.5)LVPAR 213.51 4.393899999999999e-55 12972100.0 5824.6 7787.6 5589.4 5826.299999999999 8431.099999999999 5641.4 5726.6 7163.7 9563.1 9322.7 9766.4 True False 6807.650082202174 8183.955576471 6382.060967177905 7253.743761552547 7190.896358610634 6238.369203541751 6767.049093688946 8179.176412911148 7397.0731191326595 7216.6955951036525 7341.133341072379 0.9273295778615738 1.1148081905396237 0.8693563610228098 0.9880959008017328 0.9795349061947703 0.8497828487379663 0.9217989619979343 1.11415717885821 1.0076200465869904 0.9830492459151343 1.0 12.841787091507914 SAAVETASLS(ph)PSLVPAR ddPTM_A549_PD325901_60min_R1 2 SAAVETASLSPSLVPAR 17 0 Q2KHT3;Q2KHT3-3 Q2KHT3 CLEC16A Protein CLEC16A 1 SAAVETAS(0.005)LS(0.901)PS(0.094)LVPAR;SAAVETAS(0.025)LS(0.971)PS(0.004)LVPAR 175.26 4.468399999999999e-30 17282500.0 5475.6 5856.700000000001 6183.2 5966.2 6386.299999999999 6328.5 5928.1 6910.200000000001 6672.6 6354.8 7900.0 True False 6031.478881076326 6350.264663090439 6602.829134602117 6334.718623776692 5937.748319538952 6276.962794207488 6153.697089480792 6772.370640052971 6392.173826591549 5953.5568434830475 6928.350082226087 0.8705505364905586 0.9165623254779429 0.9530160941983781 0.9143184955430744 0.8570219820115018 0.9059823363011548 0.8881908414627342 0.9774867839641557 0.9226112639703299 0.8593036975363351 1.0 12.758296114428102 -10.750649525759908 0.3332723737948001 1.035894228858808 0.9014729211112913 0.0 0.05187438224797044 1.903047202753175 0.26257404596966977 0.09518081750951748 0.013021342147519136 1.7756218239244993e-11 10.750649525759908 -0.1344213077475167 SADEADELPPDLPKPPS(ph)PAPSSEDPGLAQPR ddPTM_A549_MK2206_60min_R1 1 SADEADELPPDLPKPPSPAPSSEDPGLAQPR 31 1 Q8TBE0-3;Q8TBE0-2;Q8TBE0 Q8TBE0-3 BAHD1 Bromo adjacent homology domain-containing 1 protein 1 SADEADELPPDLPKPPS(0.991)PAPS(0.005)S(0.005)EDPGLAQPR 59.95399999999999 0.00038309 2170800.0 347.58 580.75 704.16 544.12 820.29 731.55 351.63 454.34 798.98 870.72 1047.7 True False 406.2430064848799 610.3076944161916 804.0204763745658 677.429424426475 699.6264276315925 808.9621354364106 415.51661942755663 518.7440863578946 618.0123057088821 674.0237472586965 787.5271749510085 0.5158463344584293 0.7749671552021787 1.020943152119904 0.860198156931686 0.8883838550398159 1.0272180582044492 0.5276219445423018 0.6586999190093539 0.784750450988981 0.8558736367422839 1.0 9.621185896754804 -10.542048037933885 0.9858884017222932 0.992826015720371 0.7943645547734196 0.07658128030593003 0.16633174226181108 0.7228808374012764 1.3182192644771904 0.09212117702059774 0.029868110171452664 2.870463058439165e-11 10.542048037933885 -0.19846146094695138 SADGS(ph)APAGEGEGVTLQR ddPTM_A549_PD325901_60min_R1 2 SADGSAPAGEGEGVTLQR 18 0 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 1 S(0.248)ADGS(0.752)APAGEGEGVTLQR;SADGS(1)APAGEGEGVTLQR 348.26 7.589799999999995e-220 131658000.0 11326.599999999999 10656.8 10571.900000000001 10231.3 12559.4 11079.400000000001 10434.0 11354.099999999999 10204.9 11323.7 13136.1 True False 12476.468093797777 11554.885936042854 11289.372707999117 10863.264164031794 11677.27107157784 10989.173039763366 10831.071579703877 11127.633568380861 9776.023541495688 10608.719649485263 11520.442976598753 1.0829851004115882 1.002989725266126 0.9799425882260773 0.9429554216012463 1.0136130264519905 0.9538845912510009 0.9401610338860075 0.9659032722078658 0.8485805243212895 0.9208603932187802 1.0 13.491908570969896 -2.000000001136705 0.46009700271375603 0.9335744775138066 4.494122242981642 0.5074114037339759 0.04002858379643426 63.4882167573116 0.662430269449126 0.011219825449308577 215.61017469503628 0.0099999999738264 2.000000001136705 3.5605477654678355 SADGSAPAGEGEGVT(ph)LQR ddPTM_A549_MK2206_60min_R1 1 SADGSAPAGEGEGVTLQR 18 0 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 1 SADGSAPAGEGEGVT(1)LQR 182.31 1.3749e-39 9505700.0 1601.3 1644.2 1259.2 1238.8 1644.5 1522.6 1314.2 1311.1 1831.8 2045.1 2405.4 True False 1871.560291973756 1727.8827570539859 1437.7734944484953 1542.306055611845 1402.5962284559778 1683.7205213799184 1552.973128719661 1496.952440075352 1416.900224783512 1583.1104896163638 1808.0727943372685 1.0351133526456042 0.9556488889526843 0.795196686190667 0.8530110405080025 0.7757410170922271 0.9312238570555285 0.8589107327887693 0.8279270861016662 0.7836522009628838 0.8755789559881285 1.0 10.82023704754531 -11.017557101752823 1.324783296346942 0.9994534539117955 0.8570220611156646 0.007694814044458376 0.08390573714349644 0.4403393205740394 1.384989433446623 0.05544440391181371 0.012748328540293206 9.603795378038275e-12 11.017557101752823 -0.14243139279613093 SADGSAPAGEGEGVT(ph)LQR ddPTM_A549_PD325901_60min_R1 2 SADGSAPAGEGEGVTLQR 18 0 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 1 SADGSAPAGEGEGVT(1)LQR;SADGSAPAGEGEGVT(1)LQR 233.79 4.822899999999999e-65 23854000.0 3312.0 3720.1000000000004 3546.2999999999997 3423.7 3897.4 3654.5 3305.4 3929.8999999999996 4286.6 3775.6 3670.8 True False 3648.2318018344636 4033.605882692085 3786.9732436342815 3635.1741732131445 3623.6600693000814 3624.7389636456146 3431.1888057842843 3851.5150615530897 4106.449109053045 3537.2079716520716 3219.3148711184226 1.1332323639927246 1.2529392259449195 1.176328938063349 1.1291763368117664 1.125599767145854 1.1259348988085602 1.0658133618946861 1.1963772466329254 1.275566160332252 1.0987455757700426 1.0 11.652537973868272 -11.05299636993949 1.3749395290875486 1.0005243802705621 1.1757064887228323 0.2744380859460658 0.06439245053759475 0.30033878834573563 1.0176068894108057 0.048044773062910266 0.010835763901183989 8.851230081211275e-12 11.05299636993949 0.17518210845227022 SADGSAPAGEGEGVTLQR ddPTM_A549_MK2206_60min_R1 2 SADGSAPAGEGEGVTLQR 18 0 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 0 ; 174.95 4.577799999999999e-30 10130300.0 2787.0 3277.3999999999996 3100.8 2900.5 4376.2 3431.5 3203.0 3254.2 4342.6 4447.8 4856.2 False True 3257.3774643919696 3444.2056610927693 3540.540066380159 3611.1226302083933 3732.4667771170843 3794.619052354653 3784.94363969645 3715.4928155695297 3359.008033707215 3443.0388908687432 3650.271515698279 0.8923658008406669 0.9435478008363741 0.9699388254144352 0.9892750757521672 1.022517574669533 1.0395443286987271 1.0368937278827077 1.0178675201531615 0.9202077213329303 0.9432281615385827 1.0 11.833788063663716 -5.402793281718202 1.7690377215976745 0.9819827084912038 0.8771301892438845 0.38866412405034434 0.03693407333910891 0.7321660906530303 2.811369256178079 0.006627627602500385 0.11630701712368702 3.955548540106312e-06 5.402793281718202 -0.10485251924731931 SADNT(ph)LER ddPTM_A549_MK2206_60min_R1 1 SADNTLER 8 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 S(0.004)ADNT(0.996)LER 51.268 0.031332 2780300.0 226.2 260.13 243.08 250.38 303.4 272.54 312.42 145.33 353.15 492.26 471.94 True False 264.3770299409628 273.3695058949356 277.55239916656654 311.72311123998554 258.7702619115497 301.3800019025897 369.1826699700174 165.9309725544588 273.16208886466734 381.05812411058224 354.74427311862075 0.7452608822033313 0.7706100608522728 0.7824013527450449 0.878726268079176 0.7294557841248677 0.8495697457018935 1.0407008595923652 0.4677481361312186 0.7700253663385465 1.0741769578424245 1.0 8.470635583827836 -10.585541181399604 0.9920298551511313 0.9939306447505293 0.7851077392710871 0.34204915692400195 0.13250534425153865 0.5318048067050987 0.9733609401673341 0.07276643671899734 0.022595510357616238 2.596921480083296e-11 10.585541181399604 -0.20882290547944216 SADNT(ph)LER ddPTM_A549_PD325901_60min_R1 1 SADNTLER 8 0 A0A087WT53;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 A0A087WT53 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 S(0.008)ADNT(0.992)LER 49.3 0.035681 3256800.0 409.67 500.09 446.76 548.62 470.0 423.22 370.17 442.04 556.25 483.43 717.98 True False 451.2593968168858 542.2343393660074 477.07982018612375 582.5070113935784 436.9888214119769 419.7734366381436 384.25702191479627 433.22316542632853 532.872746911481 452.90614729732033 629.6730116502135 0.716656722565017 0.8611363824295859 0.7576628049149167 0.9250944547662524 0.6939932525720609 0.6666530546354904 0.610248517572249 0.6880129168803985 0.8462689952598674 0.719271969605888 1.0 9.298459023248226 -9.517803548933331 1.1092011488894997 0.9670865631947723 0.7459539707881531 0.0 0.11517572214966579 0.2595966129232343 0.6638647438778985 0.025868781110082333 0.019108172660817706 3.0352638610434656e-10 9.517803548933331 -0.2211325924066192 SADS(ph)ENALSVQER ddPTM_A549_MK2206_60min_R1 1 SADSENALSVQER 13 0 Q99759;Q99759-2;J3KRN4;J3QRB6 Q99759 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 S(0.041)ADS(0.959)ENALSVQER 103.16 0.00012565 6090500.0 2222.4 1835.6 1572.1 1851.9 2894.0 2668.8 2576.7 2408.6 2796.3 3127.5 3713.9 True False 2597.4867875366745 1929.0241995184863 1795.0474194905348 2305.6155831349492 2468.2964336586188 2951.2106445939357 3044.8530366549635 2750.026426028139 2162.942514773521 2420.9955778569165 2791.636131574448 0.9304532056159212 0.691001301244278 0.6430090939101546 0.8259011828431275 0.8841755577459626 1.0571616448199106 1.0907055551461515 0.98509486781759 0.7747938530777105 0.8672317822779809 1.0 11.446895194195584 -6.6621099354296405 3.1373116753394044 0.9262028104856034 0.7474419683964046 0.38283948407726387 0.10838910056315092 0.2552186907314232 5.008393275423475 0.018644635625255895 0.0411755952318696 2.1771585860712649e-07 6.6621099354296405 -0.17876084208919873 SADS(ph)ENALSVQER ddPTM_A549_PD325901_60min_R1 2 SADSENALSVQER 13 0 Q99759;Q99759-2;J3KRN4;J3QRB6 Q99759 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 S(0.01)ADS(0.869)ENALS(0.12)VQER;S(0.028)ADS(0.969)ENALS(0.003)VQER 160.03 1.5172e-18 20438100.0 8422.3 7500.3 8612.400000000001 7443.799999999999 8725.2 8060.0 7896.6 8324.6 7623.299999999999 7279.700000000001 7418.299999999999 True False 9277.325695830443 8132.376603305134 9196.889254568387 7903.58661990361 8112.372052305922 7994.362032284481 8197.109434185324 8158.55932247764 7302.919211739859 6820.058499638623 6505.896128478198 1.4259873678617296 1.2500009902874654 1.4136237457451757 1.2148344307723136 1.2469261562286111 1.2287872222999128 1.2599508618504058 1.2540254503549872 1.122507809458079 1.0482888698122992 1.0 12.667532073514286 -8.692641470880847 0.18236983369015214 0.8803010611501201 1.459889899253077 0.7690602609052626 0.06002384540473946 0.8561640694714668 0.13497025025406786 0.18384657908971114 0.17575759607980013 2.0293573515751745e-09 8.692641470880847 0.579588838102957 SADS(ph)PSFR ddPTM_A549_MK2206_60min_R1 1 SADSPSFR 8 0 Q99759;Q99759-2 Q99759 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 S(0.096)ADS(0.481)PS(0.423)FR 48.423 0.035499 1484400.0 482.52 403.22 241.55 407.59 508.85 488.37 487.89 431.43 457.46 534.35 819.8 True False 563.9575795186265 423.7421757081304 275.80542216012884 507.4495682974102 433.9988390695191 540.0489892462307 576.533297649548 492.5865236989625 353.84604041350866 413.63996387780753 616.2210346710282 0.9151871614049938 0.6876463993708795 0.4475754747764632 0.823486281295662 0.7042908545003027 0.8763884367149813 0.9355949654612689 0.7993666168210756 0.5742193474495895 0.6712525873100562 1.0 9.267304119308161 SADS(ph)PSFR ddPTM_A549_PD325901_60min_R1 2 SADSPSFR 8 0 Q99759;Q99759-2 Q99759 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 S(0.063)ADS(0.469)PS(0.469)FR;S(0.027)ADS(0.839)PS(0.134)FR 53.493 0.024923 4402900.0 1173.7199999999998 1111.9 726.37 889.3 914.47 798.06 999.31 916.04 1059.97 700.79 1073.5 True False 1292.8751903530044 1205.6037152133888 775.6658362176444 944.230041253162 850.2407819502353 791.5608639559495 1037.3392888934143 897.7688635805222 1015.423147044967 656.5419998024302 941.4663054771778 1.3732569958493805 1.2805595996367964 0.8238912340304115 1.0029355652559264 0.9031027207280612 0.8407745018073169 1.1018336852402209 0.9535857612296514 1.0785549532017553 0.6973611227325496 1.0 9.878765652335048 -5.619963133465144 6.434242545492039 1.0018961247011182 1.3502042422078757 0.5446021818624799 0.12768433609457858 0.08429795125274335 4.594179002930331 0.012670227130100438 0.050390393456797425 2.3990365605918205e-06 5.619963133465144 0.3483081175067575 SAEEPGALDGGEPHGVPAFPDEVQS(ph)EHELALDYPDVDIMR ddPTM_A549_MK2206_60min_R1 2 SAEEPGALDGGEPHGVPAFPDEVQSEHELALDYPDVDIMR 40 0 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 SAEEPGALDGGEPHGVPAFPDEVQS(1)EHELALDYPDVDIMR;SAEEPGALDGGEPHGVPAFPDEVQS(1)EHELALDYPDVDIMR 86.932 2.5864000000000005e-09 26912000.0 583.6700000000001 729.3 582.0999999999999 656.88 1226.04 809.5899999999999 940.0 927.54 970.72 998.44 1105.33 True False 682.1792266385582 766.4182549078406 664.6505329721011 817.8156294884636 1045.691140125367 895.2602764376517 1110.785832442917 1059.021635472117 750.8534699213078 772.8917105533042 830.8460554439231 0.8210657343424086 0.9224551887633883 0.7999683318192763 0.9843166783183471 1.2585859116423819 1.0775284670026049 1.3369333887604742 1.2746303945636224 0.9037215318066654 0.9302465907963494 1.0 9.698437379619971 -6.427550076271048 5.794387538606978 1.0375070699295983 0.8578231179277871 0.31601314408920234 0.14658112909277302 0.3135185837474263 15.46165922391312 0.02431446293303695 0.05702479718673292 3.7363704072586643e-07 6.427550076271048 -0.1796839520018112 SAEEPGALDGGEPHGVPAFPDEVQS(ph)EHELALDYPDVDIMR ddPTM_A549_PD325901_60min_R1 4 SAEEPGALDGGEPHGVPAFPDEVQSEHELALDYPDVDIMR 40 0 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 SAEEPGALDGGEPHGVPAFPDEVQS(0.941)EHELALDY(0.059)PDVDIMR;SAEEPGALDGGEPHGVPAFPDEVQS(0.997)EHELALDY(0.003)PDVDIMR;SAEEPGALDGGEPHGVPAFPDEVQS(1)EHELALDYPDVDIMR;SAEEPGALDGGEPHGVPAFPDEVQS(1)EHELALDYPDVDIMR 139.81 1.4228999999999998e-30 148086000.0 2715.2799999999997 2543.89 1873.01 2093.4300000000003 2894.4100000000003 2775.3900000000003 2481.7799999999997 2924.31 2894.64 2488.81 2923.73 True False 2990.933226716511 2758.2725380827324 2000.1237219241025 2222.736416575517 2691.1166267724257 2752.7881440176225 2576.2254959821244 2865.9823429731837 2772.9883471817543 2331.666111857028 2564.1297450515053 1.1664515933675705 1.0757148866612158 0.7800399826818928 0.8668580132753264 1.0495243588847216 1.0735759956492872 1.0047172928569479 1.1177212652769313 1.0814539913720527 0.9093401441003105 1.0 11.3242535488834 -6.88752352392627 17.97414415150896 1.0461572932345522 0.9649131455005585 0.0618224953824984 0.10719162810631637 2.4468727512549875 379.4644539586101 0.01490832402449107 0.02817445200681191 1.2956165174568322e-07 6.88752352392627 -0.08124414773399369 SAEGS(ph)NPPKPLKK ddPTM_A549_PD325901_60min_R1 1 SAEGSNPPKPLKK 13 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 S(0.215)AEGS(0.785)NPPKPLKK 40.236999999999995 0.02249 10749000.0 2353.7 2196.5 2577.4 2770.1 2704.2 3452.0 3019.0 3289.3 3117.3 2712.1 3227.3 True False 2592.645891297638 2381.6067636174207 2752.317863165269 2941.2027856464424 2514.266320983549 3423.8880565069535 3133.8896970601895 3223.6923310940674 2986.29072170276 2540.857543150117 2830.362559540287 0.916011937254689 0.8414493597612619 0.9724259013701432 1.0391611405869354 0.8883195237686868 1.209699458808227 1.1072396666981075 1.138967981408596 1.0550912326185518 0.897714511727716 1.0 11.466771153743311 -6.136687887702076 1.2368085586805175 1.0488250036353024 0.871124103635241 0.317398079748047 0.09147566476325826 0.4457868287907732 1.1674668580817145 0.012346893302536037 0.06657193249488391 7.299819343471047e-07 6.136687887702076 -0.17770090000006145 SAENTILPEEET(ph)VVQNTSAGKDPLK ddPTM_A549_PD325901_60min_R1 1 SAENTILPEEETVVQNTSAGKDPLK 25 1 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 SAENT(0.001)ILPEEET(0.333)VVQNT(0.333)S(0.333)AGKDPLK 52.402 0.0026601 3628500.0 1890.7 1898.8 2019.6 2686.3 1727.5 2044.7 2061.8 2153.1 2161.9 1914.5 2514.2 True False 2082.642472140225 2058.8185398391793 2156.662200841381 2852.2266499700518 1606.1663595514683 2028.0486411181232 2140.262927260251 2110.154731425725 2071.0428612097658 1793.6181432693866 2204.9693388269397 0.9445221915186387 0.933717536831821 0.9780916962721765 1.2935448125040405 0.7284302467470867 0.9197627401916891 0.9706542805710338 0.9569995801158592 0.9392615238412232 0.8134435756932588 1.0 11.106542879206845 -5.760631980964293 23.335253446013557 0.9719758199734418 0.9391198539825566 0.0 0.13237588756987467 48.252321410601795 1393888.2118863857 0.0159291760750403 0.05522978616677548 1.7352738375247704e-06 5.760631980964293 -0.03285596599088525 SAENTILPEEETVVQNT(ph)SAGKDPLK ddPTM_A549_PD325901_60min_R1 1 SAENTILPEEETVVQNTSAGKDPLK 25 1 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 SAENTILPEEET(0.011)VVQNT(0.494)S(0.494)AGKDPLK 57.945 0.00081308 3865500.0 1433.6 1666.1 1599.3 1466.8 2494.8 1608.5 1806.9 1781.3 1897.0 2047.5 2156.0 True False 1579.1380166394597 1806.5080941784577 1707.8381153721646 1557.4009046555009 2319.573854592768 1595.4009092964761 1875.6625682736199 1745.7705740971828 1817.2756869952007 1918.220500571463 1890.8256680100567 0.8351579118879725 0.9554070080292825 0.903223467010329 0.8236618166361901 1.2267518332527898 0.8437588595756205 0.9919806992294563 0.9232847869758756 0.9611016593125364 1.014488291028034 1.0 10.88480063922878 -3.2762747192833857 0.4847506588552139 0.9787670084495776 8.764292638230312e-09 0.13586550151866217 0.1004443010385797 35.94970371411228 1.2189046702720037 0.01732521193781195 30.628700158529096 0.0005293285035328351 3.2762747192833857 -0.978766999685285 SAENTILPEEETVVQNTS(ph)AGKDPLKVENSQVTVAVR ddPTM_A549_PD325901_60min_R1 2 SAENTILPEEETVVQNTSAGKDPLKVENSQVTVAVR 36 2 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 SAENTILPEEETVVQNT(0.154)S(0.846)AGKDPLKVENSQVTVAVR;SAENTILPEEETVVQNT(0.138)S(0.862)AGKDPLKVENSQVTVAVR 176.15 2.6076999999999994e-64 27676000.0 4031.4 4058.6 3533.2 3698.7999999999997 4634.8 3858.7 4818.4 4046.2 4012.7 4315.5 4351.1 True False 4440.664760240178 4400.632465657941 3772.98419885758 3927.2664754157113 4309.267637191984 3827.276026547906 5001.766848729653 3965.4953668175044 3844.0601735401374 4043.018593512162 3815.9422838954347 1.1637138168942658 1.1532230149890097 0.9887424699217406 1.0291734474051408 1.1292800877462297 1.0029701032691987 1.3107553722284528 1.0391916522304947 1.0073685311655183 1.0595072704781374 1.0 11.897823635416534 -8.511272089923983 24.91865716951497 1.0045217057736833 1.1066753915128489 0.17586486849059546 0.08597100396618657 575.3317902275718 1235199.079525091 0.013530310358813878 0.01589521140946115 3.081256906513478e-09 8.511272089923983 0.10215368573916561 SAEPPRS(ph)PLLK ddPTM_A549_MK2206_60min_R1 2 SAEPPRSPLLK 11 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;Q9Y2H9;H7C1I9;O15021-2;O15021-3;O15021-6;O15021 Q6P0Q8;H7C1I9 MAST2;MAST1;MAST4 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 1;Microtubule-associated serine/threonine-protein kinase 4 1 S(0.005)AEPPRS(0.995)PLLK;S(0.003)AEPPRS(0.997)PLLK 82.069 0.00020337 40441000.0 4303.0 5039.0 4120.1 3944.7000000000003 6249.8 4948.700000000001 5026.6 4947.3 6686.9 6448.0 6692.6 True False 5029.2412017505 5295.463576690813 4704.392133479391 4911.151677084311 5330.462699059997 5472.368149318798 5939.868154635713 5648.594925470823 5172.327826785059 4991.392321669512 5030.642713636651 0.9997214050041058 1.052641556582086 0.9351473362890816 0.9762473617479465 1.0595987436377898 1.0878069584398737 1.1807374311307 1.122837626722939 1.0281644158040364 0.992197738101984 1.0 12.296527014820489 -6.760642679876938 24.999777750732875 1.0432939196292133 0.9913615588652948 0.21531777780283612 0.05984287737440003 38.45508059856134 1206602.95785676 0.010019644244382932 0.019934771741392757 1.735231089308306e-07 6.760642679876938 -0.051932360763918495 SAEPPRS(ph)PLLK ddPTM_A549_PD325901_60min_R1 2 SAEPPRSPLLK 11 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;Q9Y2H9;H7C1I9;O15021-2;O15021-3;O15021-6;O15021 Q6P0Q8;H7C1I9 MAST2;MAST1;MAST4 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 1;Microtubule-associated serine/threonine-protein kinase 4 1 S(0.004)AEPPRS(0.996)PLLK;S(0.001)AEPPRS(0.999)PLLK 88.09200000000001 8.525e-05 46815000.0 9672.2 8736.8 9209.3 9351.0 10295.8 9771.8 9689.2 10881.400000000001 9796.1 10341.400000000001 11038.3 True False 10654.114623702691 9473.080797802266 9834.298478019677 9928.590032338145 9572.658526581774 9692.221700629963 10057.927808133682 10664.361940706838 9384.403983855389 9688.44223912564 9680.65907754889 1.1005567429196441 0.978557422786633 1.0158707583068496 1.025610958179929 0.9888436778837107 1.0011944045326304 1.0389713889893863 1.1016152779761994 0.9693972185860189 1.000803990876489 1.0 13.240889556908119 SAEPPRS(ph)PLLKR ddPTM_A549_MK2206_60min_R1 2 SAEPPRSPLLKR 12 2 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;Q9Y2H9;H7C1I9;O15021-2;O15021-3;O15021-6;O15021 Q6P0Q8;H7C1I9 MAST2;MAST1;MAST4 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 1;Microtubule-associated serine/threonine-protein kinase 4 1 S(0.002)AEPPRS(0.998)PLLKR;S(0.009)AEPPRS(0.991)PLLKR 63.681000000000004 0.0014135 32688000.0 3150.2 3537.1 2730.4 2780.6 4528.5 3095.9 2989.6000000000004 2959.8 5171.1 4650.7 4755.0 True False 3681.8767450045148 3717.123281824383 3117.6117767171 3461.847124825879 3862.3636488676757 3423.5060831079027 3532.7716219907948 3379.360714007343 3999.854106549851 3600.103639948571 3574.202268676189 1.0301254568808178 1.0399868285017706 0.8722538743930123 0.9685649732711059 1.0806225721238256 0.9578378126808976 0.9884084213564278 0.9454867016406961 1.119090025095674 1.0072467558703597 1.0 11.80340556530867 -8.749713039522442 24.999736432315675 1.056236960066087 0.9852511498276457 0.14124519098168176 0.059549864664276655 265.56664746502764 566168.9283212404 0.011090032038342029 0.01252451721634458 1.7794547980679904e-09 8.749713039522442 -0.0709858102384413 SAEPPRS(ph)PLLKR ddPTM_A549_PD325901_60min_R1 2 SAEPPRSPLLKR 12 2 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;Q9Y2H9;H7C1I9;O15021-2;O15021-3;O15021-6;O15021 Q6P0Q8;H7C1I9 MAST2;MAST1;MAST4 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 1;Microtubule-associated serine/threonine-protein kinase 4 1 S(0.001)AEPPRS(0.999)PLLKR;SAEPPRS(1)PLLKR 77.74600000000001 0.00021491 49375000.0 7777.2 7241.299999999999 6917.4 10026.6 7911.8 12991.8 7259.1 9018.1 8313.5 8475.7 9355.9 True False 8566.735618727957 7851.549764344558 7386.856361705378 10645.920309939222 7356.102462228258 12885.999088217566 7535.3490228319415 8838.226920937412 7964.112505975014 7940.542855527992 8205.183611936589 1.0440638532775057 0.9569011658584242 0.9002670398453071 1.2974627763907614 0.8965189336563877 1.5704705339526472 0.9183644607135668 1.0771516323022796 0.9706196573577129 0.9677471256068411 1.0 13.002319902747995 SAEPRPELGPGQETGTNS(ph)R ddPTM_A549_MK2206_60min_R1 2 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SAEPRPELGPGQET(0.018)GT(0.006)NS(0.975)R;SAEPRPELGPGQET(0.002)GT(0.003)NS(0.995)R 134.34 2.8927e-17 207859000.0 3798.5 3584.8 3348.8 3241.7 4881.6 3655.3999999999996 3617.6000000000004 4318.8 5792.3 4814.3 5245.5 True False 4439.593935591281 3767.2510080812103 3823.7101955282105 4035.916645525444 4163.523106616419 4042.212001741857 4274.871093027124 4931.003125770295 4480.353298402412 3726.7462863234396 3942.8975815648682 1.1259724209801265 0.9554524128892167 0.9697716251637065 1.0235915496246946 1.0559551752201457 1.0251881815650845 1.0841953169198224 1.2506039083605272 1.136309834511156 0.945179581571672 1.0 11.945040520979617 -7.7522633321974 6.939933602488327 1.0843306533189268 1.021314724991293 0.10396955360657756 0.08311146855613266 0.25924125193800046 60.088481521418935 0.013176930137648155 0.019084602816137202 1.7690359872969176e-08 7.7522633321974 -0.0630159283276337 SAEPRPELGPGQETGTNS(ph)R ddPTM_A549_PD325901_60min_R1 2 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SAEPRPELGPGQET(0.002)GT(0.003)NS(0.995)R;SAEPRPELGPGQET(0.001)GT(0.011)NS(0.987)R 130.29 4.7763999999999993e-17 202536000.0 10805.4 11516.8 10550.599999999999 9997.3 13019.7 11619.5 10350.4 11377.2 11886.099999999999 12157.599999999999 12385.1 True False 11902.356253484944 12487.361154213118 11266.627161911802 10614.810515484352 12105.241187526637 11524.874644432952 10744.290135956206 11150.27282075926 11386.568552026174 11389.967061171006 10861.81121561751 1.0957984830717091 1.1496573551433422 1.0372696540437227 0.977259713391261 1.1144772218210972 1.061045383283965 0.9891803422718001 1.0265574128858905 1.0483121392916632 1.0486250253359306 1.0 13.406977073291603 -2.0000000000000036 0.29103176687494464 1.0176270559605067 1.8632384476809125 0.28834441192601434 0.04295092488098419 38.958111302035995 0.48638231010511507 0.014871863739719238 17.26426595842646 0.009999999999999919 2.0000000000000036 0.8456113917204058 SAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_A549_MK2206_60min_R1 2 SAEPSANTTLVSETEEEGSVPAFGAAAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 SAEPSANT(0.007)T(0.039)LVS(0.895)ET(0.059)EEEGSVPAFGAAAK;SAEPSANTT(0.001)LVS(0.438)ET(0.438)EEEGS(0.124)VPAFGAAAK 128.71 1.6605000000000002e-27 87939000.0 2917.2 3471.0 2730.3999999999996 2974.7 4827.799999999999 4097.2 4161.4 3769.2999999999997 5369.6 5344.8 6315.9 True False 3409.552041307589 3647.6590741603095 3117.6117767171 3703.501633539356 4117.63701534799 4530.762984498756 4917.4725139659095 4303.6098179971195 4153.394173489215 4137.405967875186 4747.487720027749 0.7181802760487521 0.768334599112768 0.6566866436673748 0.7800971486278451 0.8673296821763918 0.954349595341823 1.0358052098209887 0.9065025697363921 0.8748614885232265 0.8714937693090028 1.0 12.21294855333007 -6.816550713358285 2.2382143889256207 0.9449718281755929 0.7196978476925421 0.7775453475846018 0.05285696382304917 0.1128147489455893 1.1516676294812598 0.008746221821483224 0.019148312898445582 1.5256302337822773e-07 6.816550713358285 -0.2252739804830508 SAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_A549_PD325901_60min_R1 2 SAEPSANTTLVSETEEEGSVPAFGAAAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 SAEPSANT(0.018)T(0.028)LVS(0.663)ET(0.211)EEEGS(0.079)VPAFGAAAK;SAEPSANTTLVS(0.49)ET(0.49)EEEGS(0.02)VPAFGAAAK 105.73 3.1477e-15 142017000.0 2501.0 2660.3999999999996 2325.1000000000004 1921.11 2123.3199999999997 2420.27 2037.52 2683.7 2538.75 2417.2 2493.7 True False 2754.8996788611116 2884.6012446746126 2482.895267962122 2039.772601542631 1974.1853282563377 2400.5601235579597 2115.058938573725 2630.171498178078 2432.0551662409416 2264.577579478068 2186.9907088667337 1.2596759865928557 1.3189819385055233 1.135302156472682 0.9326846215087997 0.9026948858321082 1.097654468226751 0.9671092474232399 1.2026441116162738 1.1120555548684505 1.035476543314415 1.0 11.094731375966996 -5.924758244774413 4.334425405369356 1.044154417809787 1.2863497465008604 0.5868260704623747 0.08278426373306742 0.11816439114622786 4.24039187798736 0.01216836844388164 0.040482251494649256 1.1891640056147883e-06 5.924758244774413 0.2421953286910734 SAEPSPTVMS(ph)TSLGSNLSELDR ddPTM_A549_MK2206_60min_R1 1 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 SAEPSPTVMS(0.373)T(0.373)S(0.252)LGS(0.002)NLSELDR 99.021 2.2052e-07 3926000.0 504.91 490.81 488.6 547.41 1066.5 618.53 619.3 932.63 1085.9 1009.5 1117.1 True False 590.1264641356834 515.7901325809916 557.8908270231382 681.5254745741685 909.6192627840076 683.9824340530155 731.8187936509559 1064.8331585595888 839.9453838259726 781.4532488718005 839.693239608448 0.7027881567926657 0.6142601943794455 0.6643983787261223 0.8116362528915515 1.0832756772082222 0.8145622732082003 0.8715311248572224 1.268121628627288 1.0003002813475574 0.9306413485431834 1.0 9.71371856227913 -6.514592358150428 3.07408644228278 1.0014049880434437 0.6573360417624567 0.629617152575115 0.1131635698820377 0.11663007126361315 2.243767791626828 0.015689003949164806 0.037484221281845836 3.057789900115025e-07 6.514592358150428 -0.34406894628098694 SAEPSPTVMS(ph)TSLGSNLSELDR ddPTM_A549_PD325901_60min_R1 1 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 SAEPSPT(0.003)VMS(0.373)T(0.33)S(0.292)LGS(0.001)NLSELDR 95.958 7.774299999999999e-07 10312000.0 1066.4 1158.6 970.12 806.62 1287.6 1133.9 1057.5 1155.2 1268.1 1435.7 1370.6 True False 1174.6601429578125 1256.239288107053 1035.9581770054672 856.4430854330653 1197.163417978855 1124.665894343347 1097.7437411862036 1132.1586297631316 1214.806166936538 1345.0496569819056 1202.0248889492502 0.9772344597495326 1.0451025595694563 0.8618441985099408 0.7125002928863852 0.9959555987441784 0.9356427680349226 0.9132454338327354 0.9418761958854344 1.0106331225790677 1.118986527939268 1.0 10.231251053250212 -8.650093221862983 3.6745189067169037 1.0051325526641035 0.918701334554027 0.24574734754014593 0.08766125437461164 0.2998035371732694 7.776532756909088 0.014356391567105104 0.016212502986775654 2.2382406457992262e-09 8.650093221862983 -0.08643121811007648 SAEPSPTVMSTS(ph)LGSNLSELDR ddPTM_A549_MK2206_60min_R1 1 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 SAEPSPTVMS(0.17)T(0.125)S(0.637)LGS(0.034)NLS(0.033)ELDR 80.975 9.734299999999999e-05 3555000.0 591.82 627.75 723.78 627.38 1221.6 871.91 863.92 1309.5 1333.6 814.91 1075.1 True False 691.7047473901886 659.69979366296 826.4228873982939 781.088128164158 1041.904258243735 964.1749374729837 1020.8830812383887 1495.1256351755587 1031.5417293215914 630.8212650204247 808.1229987494789 0.8559399354560624 0.8163358729844408 1.0226449298895501 0.9665460943109455 1.2892892045592297 1.1931041920165442 1.2632768561446006 1.8501213769304605 1.2764662445170343 0.7806005595640542 1.0 9.65843108198575 -6.374721377951136 1.5373486089220383 1.212403161608234 0.852027650112801 0.27143099237355295 0.24907292192040711 0.44335810160223676 1.9864698021982836 0.03662102936689888 0.1266303068523931 4.2196713003315523e-07 6.374721377951136 -0.360375511495433 SAEPSPTVMSTS(ph)LGSNLSELDR ddPTM_A549_PD325901_60min_R1 1 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 SAEPSPTVMS(0.001)T(0.23)S(0.769)LGSNLSELDR 229.37 1.442e-87 11441000.0 2257.3 2042.5 1954.5 2064.9 2776.2 2105.1 2259.3 2542.6 1933.3 2505.7 2981.2 True False 2486.459434263568 2214.628643154375 2087.1441233632804 2192.4441832718476 2581.2092893700637 2087.9567635436792 2345.278897836398 2491.8858483688855 1852.0501242318496 2347.4896743745617 2614.53129938385 0.9510153635756955 0.8470461392740956 0.7982861493588331 0.8385610773864236 0.9872550732050371 0.7985969661314571 0.8970169522885784 0.9530908461322044 0.7083679299109215 0.8978625250834746 1.0 11.352336625910363 -11.19710684424009 1.635174850397644 0.9998846700102753 0.8420213779702412 0.041191896617326695 0.08478023161513003 0.38885066458119083 1.8726225108134 0.06492353024467525 0.01361795899233093 6.351746482605309e-12 11.19710684424009 -0.15786329204003402 SAES(ph)PSWT(ph)PAEHVAK ddPTM_A549_MK2206_60min_R1 1 SAESPSWTPAEHVAK 15 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 2 S(0.011)AES(0.864)PS(0.27)WT(0.855)PAEHVAK 70.942 0.0024099 2535000.0 659.92 396.06 365.3 633.31 740.59 834.41 595.26 689.04 929.97 850.19 741.3 True False 771.2983625050406 416.2177622909631 417.1050329749329 788.4709784303662 631.6501920536407 922.7067123634694 703.4110368297562 786.7135300965002 719.3332798569295 658.1314885174008 557.2147511608119 1.3842030579740416 0.7469611337888699 0.7485534654385999 1.4150217250849733 1.1335848355373972 1.6559265712927556 1.262369733328815 1.4118677376318327 1.2909444309548264 1.1811092350774188 1.0 9.122089640723324 -6.260864665817255 24.999435897896984 1.2203046495723968 0.9386114180780737 0.24872185026178584 0.23357530217818315 64.15321187970648 2790502.5586225674 0.034784627432294164 0.08638554908183693 5.484478447740404e-07 6.260864665817255 -0.2816932314943231 SAES(ph)PSWT(ph)PAEHVAK ddPTM_A549_PD325901_60min_R1 2 SAESPSWTPAEHVAK 15 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 2 S(0.011)AES(0.752)PS(0.239)WT(0.998)PAEHVAK;S(0.216)AES(0.752)PS(0.139)WT(0.892)PAEHVAK 99.021 1.5278e-05 11078900.0 4701.1 3633.7999999999997 4180.2 4366.0 4853.1 4432.4 4152.5 4585.6 5682.6 5594.2 5758.3 True False 5178.352211233094 3940.0330788222086 4463.893509584645 4635.677904094574 4512.2349982861 4396.304003957535 4310.525659835189 4494.13661066639 5443.7800837738105 5240.9812572878545 5050.0656048712 1.0254029583770459 0.7801944345082815 0.883927825666038 0.9179440955426569 0.8935002733298516 0.8705439390167411 0.8535583489603255 0.8899164807545131 1.077962250336479 1.0378045885646516 1.0 12.302086414547817 -8.750357013274519 24.624335465032885 1.0368155052839432 0.8848211042164248 0.5725286561912164 0.05731875447648452 86.30137714071768 191756.04772503732 0.009519067616520497 0.010742320525571787 1.7768181700166559e-09 8.750357013274519 -0.15199440106751838 SAES(ph)PSWTPAEHVAK ddPTM_A549_PD325901_60min_R1 2 SAESPSWTPAEHVAK 15 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 S(0.014)AES(0.564)PS(0.421)WTPAEHVAK;S(0.017)AES(0.756)PS(0.227)WTPAEHVAK 164.93 1.2936e-20 62025000.0 6766.700000000001 6453.200000000001 5469.5 6194.6 5797.6 6505.5 5752.7 5814.7 7336.1 6602.4 8909.9 True False 7453.650402618747 6997.033811507366 5840.6931607753695 6577.226373042658 5390.39657663421 6452.521364891649 5971.622146498225 5698.721246956095 7027.789228974955 6185.523337227366 7814.03878450965 0.9538793712407304 0.8954439572757312 0.7474615012602458 0.8417191870203131 0.6898348888823016 0.8257600893513558 0.7642171111738293 0.7292926749036738 0.899379875475748 0.7915910718909392 1.0 12.931852700931161 -9.266329780560207 1.490263135225604 0.9707402535923052 0.8048245384978484 0.02611692833285406 0.09214128930528649 0.22316109749472207 1.0254102851009743 0.01707876802591249 0.015009246730407074 5.415894794386473e-10 9.266329780560207 -0.1659157150944568 SAES(ph)PTSPVTSETGSTFK ddPTM_A549_MK2206_60min_R1 2 SAESPTSPVTSETGSTFK 18 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SAES(0.982)PT(0.018)SPVTSETGSTFK;SAES(0.975)PT(0.025)SPVTSETGSTFK 252.3 1.6753999999999995e-86 60371000.0 4585.6 4421.4 4017.2000000000003 5205.6 6985.5 5492.5 4528.6 4872.9 7521.299999999999 7179.7 6967.4 True False 5359.5371728438495 4646.430374673696 4586.899366183685 6480.972233688262 5957.942203635897 6073.712704373577 5351.388000852122 5563.6484976303755 5817.737559048055 5557.80078348179 5237.202289542478 1.023358823382791 0.8871970410521622 0.8758300925940358 1.237487474300795 1.1376192620118142 1.1597246714150078 1.0218028071089877 1.0623321747070449 1.1108483570827075 1.061215602570761 1.0 12.35458061533887 -6.227700364506076 24.991724894103115 1.0756008898107825 0.9246354735066424 0.49094778167911046 0.07440393206706394 488.31924174003206 361715.521745728 0.011344078580798507 0.03001192081308044 5.919699148018264e-07 6.227700364506076 -0.15096541630414007 SAES(ph)PTSPVTSETGSTFK ddPTM_A549_PD325901_60min_R1 2 SAESPTSPVTSETGSTFK 18 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SAES(0.99)PT(0.01)SPVTSETGSTFK;SAES(1)PTSPVTSETGSTFK 288.16 2.1574999999999993e-117 99044000.0 11860.1 11791.5 13679.6 11980.400000000001 15653.5 12885.3 13791.599999999999 14073.9 14018.0 13813.3 16588.6 True False 13064.128621055846 12785.211087272846 14607.979918117344 12720.402098537477 14554.052161643374 12780.366388907598 14316.446885053098 13793.185023739035 13428.87220890812 12941.12588060748 14548.30736379945 0.8979827202141272 0.8788108999598321 1.0041016836409697 0.8743561556988857 1.0003948774039666 0.8784778922604414 0.9840627178854298 0.948095519212126 0.9230539246320284 0.8895279400549978 1.0 13.828563690765279 -9.131193470569109 0.009572212102845803 1.9055064520767675 8.137545878945356e-07 0.0 0.0530846411221418 1339.6606715005098 7.998580752371389 804.7835943740141 786.6731808071529 7.392758672676251e-10 9.131193470569109 -1.9055056383221796 SAES(ph)PTSPVTSETGSTFKK ddPTM_A549_MK2206_60min_R1 3 SAESPTSPVTSETGSTFKK 19 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(0.002)AES(0.797)PT(0.177)S(0.024)PVTSETGSTFKK;S(0.017)AES(0.406)PT(0.222)S(0.345)PVT(0.009)SETGSTFKK;SAES(0.998)PT(0.002)SPVTSETGSTFKK 253.36 1.5438999999999996e-97 169735000.0 9405.400000000001 11121.5 11478.2 10033.4 13893.2 10188.8 8575.1 8466.8 16356.0 15943.9 14059.1 True False 10992.801580047442 11687.53684623276 13105.981356399883 12491.583450416441 11849.528684210758 11266.97205322193 10133.084672107725 9666.99482848753 12651.39211516494 12342.161916480545 10567.837458579474 1.0402129691276585 1.1059535020331204 1.240176280887044 1.1820378104202558 1.121282261451774 1.066156827012405 0.95886076142108 0.9147561993054126 1.1971599832749071 1.1678985378849285 1.0 13.367392561664627 -7.135244764584205 4.019266029723469 1.0676238904382374 1.146860859178386 0.1760218357085198 0.09030235681988741 0.4309270483470013 11.99170428892475 0.015621410844567815 0.027826328061318586 7.324116359836919e-08 7.135244764584205 0.07923696874014863 SAES(ph)PTSPVTSETGSTFKK ddPTM_A549_PD325901_60min_R1 2 SAESPTSPVTSETGSTFKK 19 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SAES(0.825)PT(0.171)S(0.004)PVTSETGSTFKK;S(0.004)AES(0.556)PT(0.429)S(0.01)PVTSETGSTFKK 147.93 3.1745999999999997e-21 70567000.0 8306.9 9973.7 8079.5 8983.0 10189.599999999999 10481.9 9680.900000000001 10102.0 10288.5 10736.400000000001 11819.7 True False 9150.210372783431 10814.218701703194 8627.823455980366 9537.859508126789 9473.917648211662 10396.538881662864 10049.31194709175 9900.507685134306 9856.110124222523 10058.501871714518 10365.95183125161 0.8827178171132416 1.04324415912296 0.8323233212379901 0.9201142030557906 0.9139457526369538 1.002950722799911 0.9694538534121638 0.9550987546831862 0.9508157364293359 0.9703404024500497 1.0 13.339564974451081 -7.246900050396654 23.81372343535827 0.9754530387560428 0.9207065188751634 0.24363340421645763 0.04932117717752301 493.9496640545779 809030.8833640965 0.006963406845663573 0.01202114895593451 5.6636961974172305e-08 7.246900050396654 -0.05474651988087942 SAES(ph)PVLVVTR ddPTM_A549_MK2206_60min_R1 2 SAESPVLVVTR 11 0 Q9C0G0-3;Q9C0G0-2;Q9C0G0 Q9C0G0-3 ZNF407 Zinc finger protein 407 1 S(0.006)AES(0.992)PVLVVT(0.002)R;S(0.002)AES(0.998)PVLVVTR 90.697 0.0002983 4534700.0 1063.8600000000001 1257.03 1145.99 1256.09 1422.24 865.89 1117.46 1067.6799999999998 1504.6399999999999 1791.9 1514.01 True False 1243.4135591202162 1321.007457790762 1308.5086141224845 1563.8321063880217 1213.0303800299362 957.5179050687362 1320.4880173634708 1219.0269096328668 1163.8414424163468 1387.1085454714014 1138.0395324497235 1.0925925889794588 1.1607746656631381 1.1497918805208922 1.3741456792996853 1.0658947650252437 0.8413749063774615 1.1603182312313984 1.0711639401566406 1.0226722440046372 1.2188579622410272 1.0 10.152334958544339 -6.984030647154308 24.98254051266248 1.0153084622610609 1.1926576282257866 0.22743775405071454 0.11358874904308477 166.39277015685315 260304.2680224366 0.013060975430611419 0.024677657899864636 1.0374552024273783e-07 6.984030647154308 0.17734916596472572 SAES(ph)PVLVVTR ddPTM_A549_PD325901_60min_R1 2 SAESPVLVVTR 11 0 Q9C0G0-3;Q9C0G0-2;Q9C0G0 Q9C0G0-3 ZNF407 Zinc finger protein 407 1 S(0.056)AES(0.944)PVLVVTR;SAES(1)PVLVVTR 117.2 1.7847e-05 5058100.0 3685.1 3582.3 3082.5 3310.1000000000004 3188.3999999999996 3917.2 3158.7 4034.9 3389.9 3350.8 3455.9 True False 4059.208639172765 3884.1929930829415 3291.6969865783126 3514.5573592174633 2964.457783382868 3885.2996219435186 3278.9060570069623 3954.4207541821856 3247.4342916947962 3139.2299161488936 3030.8462087550806 1.3392987831078647 1.2815539705917223 1.0860653295669451 1.1595960722339214 0.9780957459403783 1.2819190926679862 1.0818450792835748 1.3047249783770662 1.071461258018987 1.0357602134614186 1.0 11.565504933387613 -2.000000002216743 0.05945464450224708 0.746057733131301 1.9975192972581204 0.2978255426867732 0.10554099202176377 221.39160040604 0.9568407042205808 4.056784248786229 23.954350754845084 0.009999999948957611 2.000000002216743 1.2514615641268194 SAESPT(ph)SPVTSETGSTFK ddPTM_A549_PD325901_60min_R1 1 SAESPTSPVTSETGSTFK 18 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SAESPT(0.488)S(0.488)PVTS(0.023)ETGSTFK 272.24 8.342899999999997e-101 61206000.0 4918.9 5181.9 5565.2 4783.7 6263.9 5696.8 6361.4 5942.9 5542.0 5933.7 7216.0 True False 5418.263106897208 5618.596898879632 5942.887938266218 5079.178284429042 5823.94527328188 5650.407149568021 6603.486558091649 5824.36419738514 5309.08901282414 5559.045169348422 6328.477745992838 0.8561716299512985 0.8878275510152976 0.9390706860001564 0.8025908422677401 0.9202758557489713 0.8928540758709046 1.0434557603166015 0.9203420524111189 0.8389203890597277 0.8784174318805786 1.0 12.627642799731655 -7.546652326954176 24.997479927455014 0.9314915657334266 0.8830213712137677 0.15933769470542014 0.06066486535983612 446.73546723090567 469732.3107985909 0.011125940773148366 0.01650288325262484 2.840191824979121e-08 7.546652326954176 -0.04847019451965895 SAESPT(ph)SPVTSETGSTFKK ddPTM_A549_PD325901_60min_R1 2 SAESPTSPVTSETGSTFKK 19 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(0.05)AES(0.386)PT(0.559)S(0.006)PVTSETGSTFKK;SAES(0.389)PT(0.602)S(0.007)PVT(0.001)SETGSTFKK 148.89 3.9495999999999994e-21 78596000.0 9004.3 10427.3 8948.3 10644.400000000001 11587.2 11182.4 10467.6 11823.900000000001 10920.400000000001 11612.3 12872.7 True False 9918.409907384688 11306.045165612528 9555.585448499183 11301.880412813629 10773.355045669912 11091.33424191291 10865.95024609051 11588.063038829885 10461.453564713966 10879.09739623248 11289.43950676858 0.8785564510477344 1.0014709019729449 0.8464180566953864 1.0011019950137994 0.9542860864979834 0.9824521611779844 0.9624880171930442 1.0264515817532187 0.9266583658508294 0.9636525701484047 1.0 13.462686241136172 -6.2983158264027015 24.990364269148788 0.9711762125166885 0.918080593727875 0.3150921691697869 0.043651210769102645 602.853169020902 408539.5274126273 0.006053228916327664 0.014066725407478785 5.031345876062567e-07 6.2983158264027015 -0.053095618788813526 SAESPTS(ph)PVTSETGSTFK ddPTM_A549_MK2206_60min_R1 2 SAESPTSPVTSETGSTFK 18 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SAESPT(0.001)S(0.992)PVTS(0.007)ETGSTFK;SAESPT(0.056)S(0.855)PVTS(0.087)ET(0.001)GSTFK 256.18 9.720999999999999e-87 104577000.0 8469.599999999999 7489.1 6920.299999999999 6805.8 8739.7 6519.4 5982.200000000001 6866.2 8389.2 8749.3 9424.2 True False 9899.061418160823 7870.263201467585 7901.702599771223 8473.221305523977 7454.101707410588 7209.278580772527 7069.08830514896 7839.50487685561 6489.059594799567 6772.827053347247 7083.911045311914 1.3974005820855073 1.1110053685211185 1.1154435098391753 1.1961219235144829 1.0522579489960795 1.0176975027860606 0.9979075485183057 1.1066633709416416 0.9160278204077653 0.9560858415676267 1.0 12.790330380533234 -2.0000000000025344 0.3140679043524964 0.9629853437658794 4.469358314282485 0.7298520773684689 0.06596317740258344 18.302587445983008 0.2287292357510077 0.021229121267448522 37.24157633491038 0.009999999999941642 2.0000000000025344 3.5063729705166056 SAESPTS(ph)PVTSETGSTFK ddPTM_A549_PD325901_60min_R1 1 SAESPTSPVTSETGSTFK 18 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SAESPT(0.129)S(0.828)PVTS(0.041)ET(0.001)GSTFK 296.52 2.1892999999999996e-133 60112000.0 5265.1 4543.4 5569.9 6524.9 6362.0 5299.6 5262.6 6189.5 5366.2 6774.3 7725.0 True False 5799.6090760382385 4926.288263063684 5947.906908529615 6927.928253876932 5915.155067708508 5256.441814676778 5462.871122805216 6066.0455669311805 5140.677275463174 6346.56954189073 6774.87397280969 0.8560467839423163 0.7271409450323167 0.8779361700898012 1.0225914580376714 0.8731018601155414 0.7758730030658881 0.8063428404321509 0.8953739348180757 0.7587856683526205 0.9367804578154636 1.0 12.725978394155375 -10.998774562104376 1.2703552485390148 1.0001994413435291 0.8367183459874873 0.2617121761407665 0.07819386273676825 0.41351030537856365 1.1853540097225566 0.05832953751663823 0.01323468071601634 1.0028256597027777e-11 10.998774562104376 -0.16348109535604183 SAESPTS(ph)PVTSETGSTFKK ddPTM_A549_MK2206_60min_R1 1 SAESPTSPVTSETGSTFKK 19 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SAES(0.002)PT(0.13)S(0.79)PVT(0.063)S(0.012)ET(0.003)GSTFKK 110.44 2.608e-10 68189000.0 3040.3 3754.3 3587.6 2735.8 4263.0 2862.7 2881.2 2218.9 4355.0 4096.2 4143.7 True False 3553.4283118015423 3945.3778340881768 4096.375626336898 3406.0711228147284 3635.9183471619517 3165.6290138935333 3404.676745143122 2533.435870096254 3368.5994535059467 3170.8655750655475 3114.704929697901 1.140855519866594 1.266693931893845 1.315172935734304 1.0935453597349547 1.1673395808682923 1.0163495693316194 1.0930976840471838 0.813379092812485 1.0815147917824341 1.0180308076158897 1.0 11.604879781258072 -6.882167257369965 1.3260883837416355 1.0227824102678067 1.2358081986523102 0.5513765628874099 0.08704630355928267 0.25700387210756764 0.8991559559963144 0.013392124823931551 0.03384334696553924 1.311694636217242e-07 6.882167257369965 0.21302578838450348 SAESPTS(ph)PVTSETGSTFKK ddPTM_A549_PD325901_60min_R1 4 SAESPTSPVTSETGSTFKK 19 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SAESPT(0.015)S(0.982)PVT(0.002)SETGSTFKK;SAESPT(0.004)S(0.996)PVTSETGSTFKK;SAESPT(0.001)S(0.998)PVTSETGSTFKK;SAESPT(0.017)S(0.983)PVTSETGSTFKK 244.72 7.490099999999999e-86 180989000.0 21873.600000000002 21613.600000000002 22978.6 23564.199999999997 26135.9 26979.5 23281.5 27836.5 26350.6 29037.899999999998 32254.3 True False 24094.191769506742 23435.053924935804 24538.065977546925 25019.707115818906 24300.204547960184 26759.787897024707 24167.490222625627 27281.279170188187 25243.17591867986 27204.442038360994 28287.225576853798 0.8517693509405874 0.8284677428426097 0.8674610350484621 0.8844878423245383 0.8590522418658117 0.9460025630410737 0.8543605719466821 0.9644381382001375 0.892387832454493 0.9617218190751518 1.0 14.787863063077586 -14.999999999999714 0.09623465106985284 1.384865607714712 0.7911886500929747 0.6445174036362606 0.03247233464900535 44.95271722115661 0.3129034078389094 3.52857931698597 0.23688778202006283 1.0000000000006586e-15 14.999999999999714 -0.5936769576217372 SAFS(ph)PYQTPVAHFPPPPEEPTATAAFGAR ddPTM_A549_MK2206_60min_R1 1 SAFSPYQTPVAHFPPPPEEPTATAAFGAR 29 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 S(0.182)AFS(0.746)PY(0.019)QT(0.053)PVAHFPPPPEEPTATAAFGAR 52.155 0.0023484 2138400.0 282.02 501.57 530.3 360.61 535.23 426.7 509.78 640.65 686.77 918.5 902.28 True False 329.61808127298997 527.0977706213156 605.5045140613385 448.95946618839787 456.49837601489384 471.85311077946375 602.4004273007984 731.4640994083396 531.2176915463332 711.0102120740459 678.2189743388333 0.48600539611018784 0.7771793337618734 0.8927861604751164 0.6619683069558313 0.6730840529195082 0.6957238423467188 0.8882093395986935 1.0785072772719353 0.783253951371966 1.0483490420880355 1.0 9.405607336570412 -7.791358312854125 6.080442814814127 0.9114077871298562 0.707265731002813 0.5181002904493016 0.12167653473725132 0.14408268706142405 15.617543763924855 0.019669513939664006 0.02769128733240721 1.616745598007456e-08 7.791358312854125 -0.20414205612704317 SAFS(ph)PYQTPVAHFPPPPEEPTATAAFGAR ddPTM_A549_PD325901_60min_R1 2 SAFSPYQTPVAHFPPPPEEPTATAAFGAR 29 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 S(0.047)AFS(0.949)PYQT(0.004)PVAHFPPPPEEPTATAAFGAR;S(0.068)AFS(0.927)PYQT(0.005)PVAHFPPPPEEPTATAAFGAR 90.336 8.509e-10 7262500.0 3020.5 2075.6 2637.2 2670.7 3246.3999999999996 3411.3999999999996 2972.0 3678.5 3651.8 2785.8 3414.0 True False 3327.1389364254237 2250.5180963188322 2816.176250771882 2835.6630734002224 3018.384063472003 3383.618689446067 3085.1010863408005 3605.129431772577 3498.3275454765785 2609.9041125723975 2994.099643129096 1.1112318670023529 0.7516510352230108 0.9405753269549613 0.9470837351413951 1.0081107589049803 1.1300955521673586 1.0303935920838627 1.2040779738395417 1.1684071882859985 0.8716824500352365 1.0 11.547906519504012 -6.914852673571123 2.2790781343753097 1.0909222409496764 0.920377632798744 0.19682213972949003 0.11538695415374285 0.24924488275228018 2.6208512974674028 0.014932682614812095 0.031106197557083166 1.216598639402722e-07 6.914852673571123 -0.17054460815093242 SAFS(ph)SLQNIPESLRR ddPTM_A549_MK2206_60min_R1 1 SAFSSLQNIPESLRR 15 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.022)AFS(0.522)S(0.457)LQNIPESLRR 49.463 0.010513 1511400.0 386.25 418.18 368.79 365.62 490.55 463.64 273.11 389.12 605.9 716.65 763.89 True False 451.43955709415053 439.463575808804 421.08996745366943 455.19691641330564 418.39074482765574 512.7020770606762 322.73055180689903 444.27895163002125 468.6646174234796 554.7582672649588 574.1950307085289 0.7862129293196704 0.7653559371047277 0.7333570388689445 0.7927566280948386 0.7286561576671637 0.8929058066351195 0.5620573751895156 0.7737422441322812 0.8162115524496445 0.9661495443114755 1.0 9.165397034769168 -10.005793120352719 0.6925729427626514 0.9932838666623532 0.7539662650565575 0.5617029776783584 0.07594533154682845 0.3362969504707545 0.32276383509795903 0.03923121222809411 0.015910393211221167 9.867494196659425e-11 10.005793120352719 -0.23931760160579574 SAGAENPRPFS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 SAGAENPRPFSPPR 14 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 SAGAENPRPFS(1)PPR;SAGAENPRPFS(1)PPR 122.44 4.4521999999999996e-07 115725000.0 9926.5 10858.0 9842.8 9497.5 12572.4 10405.9 9791.5 10353.2 14598.4 13498.7 13245.0 True False 11601.850520375634 11410.62582173225 11238.65704507437 11824.387926358975 10723.016614557575 11507.045431122611 11570.488806771085 11820.79780534524 11291.88570885447 10449.334294745695 9955.900956596457 1.165324019489027 1.146116847835046 1.1288437976703656 1.1876763316457581 1.0770513549005178 1.1558015172397247 1.1621739566527984 1.1873157293226348 1.1341902413535796 1.0495618970397957 1.0 13.28133616281773 -10.380240131170428 0.7073710710627861 0.9970614435934884 1.150164249379463 0.680781196584048 0.032275059673859484 0.2546038660628636 0.22786478677308442 0.02129514898175772 0.006069298584306504 4.166389507396696e-11 10.380240131170428 0.15310280578597468 SAGAENPRPFS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 SAGAENPRPFSPPR 14 1 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 SAGAENPRPFS(1)PPR 134.93 1.5032000000000001e-09 110300000.0 4302.9 4588.1 4426.8 4533.3 5277.6 4352.3 4496.1 4750.8 3801.4 4859.8 4813.5 True False 4739.727240372438 4974.755288938353 4727.229268510907 4813.311645128704 4906.919582731594 4316.856311800466 4667.201545860325 4656.041567069497 3641.640377724591 4552.951398621344 4221.470015290543 1.1227670037225708 1.1784414601831454 1.1198064303165622 1.1401979944650695 1.1623722459139332 1.022595516766535 1.105586804822799 1.1029431809784025 0.8626474580026016 1.0785227378449085 1.0 12.04352975147924 -8.691145612249716 7.38014451177007 0.9352721088463739 1.1205193132693954 0.44254274156242357 0.06431078503804198 0.09989783577464718 8.888328447762419 0.010308957153422005 0.011673186637503169 2.036359203361589e-09 8.691145612249716 0.18524720442302145 SAGAENPRPFS(ph)PPRAPPPPPPPPPPPPR ddPTM_A549_MK2206_60min_R1 2 SAGAENPRPFSPPRAPPPPPPPPPPPPR 28 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 SAGAENPRPFS(1)PPRAPPPPPPPPPPPPR;S(0.017)AGAENPRPFS(0.983)PPRAPPPPPPPPPPPPR 125.02 1.0325e-21 44228000.0 7898.200000000001 11003.900000000001 9083.3 8632.4 11650.9 10125.3 8665.7 7855.1 12929.4 13087.400000000001 14077.6 True False 9231.223067549572 11563.951508542965 10371.448524558462 10747.33838752316 9937.068043853904 11196.752525369819 10240.145519362333 8968.584480234844 10000.911544009143 10130.947250405947 10581.743398005456 0.8723726063220885 1.092821010073127 0.9801266326788238 1.01564912163235 0.9390766407855754 1.0581198299970387 0.9677181853882877 0.8475526331441117 0.9451100038859577 0.9573986884160809 1.0 13.369289718197026 -7.973895669952844 24.96328734097473 0.961188287973642 0.997000372365943 0.09709869059740783 0.06545588641114983 512.8020800190162 490385.8759471481 0.010026779104942197 0.013853713543658256 1.0619506376980435e-08 7.973895669952844 0.03581208439230099 SAGAENPRPFS(ph)PPRAPPPPPPPPPPPPR ddPTM_A549_PD325901_60min_R1 2 SAGAENPRPFSPPRAPPPPPPPPPPPPR 28 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 SAGAENPRPFS(1)PPRAPPPPPPPPPPPPR;SAGAENPRPFS(1)PPRAPPPPPPPPPPPPR 164.56 9.1943e-47 88520000.0 9092.4 11014.8 10999.4 11979.400000000001 12988.7 12625.0 13022.0 12166.900000000001 13927.0 13155.6 13653.0 True False 10015.45375452889 11943.055852443968 11745.885428765456 12719.340330808649 12076.418520582436 12522.186185805416 13517.559335911817 11924.221634751604 13341.696622447105 12324.953170851257 11973.767553497813 0.8364496562824242 0.9974350845782977 0.9809682187570288 1.0622671831551496 1.008572988128088 1.0458016768621332 1.1289311635219632 0.9958621278954313 1.114243830343081 1.0293295836740086 1.0 13.54758954816562 -4.238025697867292 0.7987037101586556 1.0537919631306814 2.238564670022415e-10 0.6548018039007217 0.043423802124157314 5.236432330794672 0.7129751558524373 0.007644647980525068 7.215636328420064 5.7806184159234745e-05 4.238025697867292 -1.0537919629068249 SAGAGS(ph)PARPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SAGAGSPARPPSPR 14 1 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 2 S(0.437)AGAGS(0.563)PARPPS(1)PR;S(0.028)AGAGS(0.972)PARPPS(1)PR 61.096000000000004 0.0019510000000000003 10945200.0 1674.25 1692.8600000000001 1371.58 1276.02 1975.5 1302.56 1011.71 1533.24 1878.5900000000001 1714.1 1792.79 True False 1844.2186274822925 1835.5232532926861 1464.6636667805612 1354.8368573483178 1836.7476951050223 1291.9523832223922 1050.211177678955 1502.658325396489 1799.6393952727005 1605.8714334698636 1572.2881954321651 1.1729520280315935 1.167421633403644 0.9315491085131363 0.8616975318420693 1.1682003976377668 0.82170201810062 0.6679508125355416 0.9557143084595014 1.1445989358064503 1.0213594671353923 1.0 10.618649967915768 -5.742953557329217 23.436663372677355 1.0049748158655336 1.1701872382292886 0.19206861554661236 0.1420519782120989 181.2842942824632 229826.82157633197 0.021907276508298684 0.0844345368988665 1.8073673922952108e-06 5.742953557329217 0.165212422363755 SAGAGSPARPPS(ph)PR ddPTM_A549_MK2206_60min_R1 3 SAGAGSPARPPSPR 14 1 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 1 SAGAGSPARPPS(1)PR;SAGAGSPARPPS(1)PR;SAGAGS(0.022)PARPPS(0.978)PR 107.98 4.509100000000001e-06 58015300.0 5460.049999999999 5990.870000000001 5578.0 4953.070000000001 7115.42 5237.6 4919.41 4993.2300000000005 6214.75 8098.38 7912.7300000000005 True False 6381.572954593964 6295.779693925317 6369.044275757393 6166.57237235176 6068.751143739874 5791.839355562498 5813.203119125546 5701.035643625545 4807.119047916441 6268.950333430823 5947.780760761753 1.0729334538848492 1.0585090384399094 1.070827007911046 1.0367854197036654 1.0203387427754866 0.9737815814886756 0.977373469694103 0.9585147591915263 0.808220618962555 1.0539982197709548 1.0 12.53813575431349 -7.47050861697548 1.0412636202619503 0.9120667143604972 1.0632504022793823 0.27211714351586047 0.06197902169520809 0.3366865663369519 0.7286422420209858 0.012175974667453068 0.024152142542977234 3.384475565536575e-08 7.47050861697548 0.15118368791888503 SAGAGSPARPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SAGAGSPARPPSPR 14 1 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 1 SAGAGSPARPPS(1)PR;SAGAGSPARPPS(1)PR 107.03 5.0497e-06 67577000.0 11220.900000000001 11661.0 12078.0 12407.4 13719.9 11762.5 11659.7 12579.3 12337.300000000001 14039.1 14499.7 True False 12360.037507610014 12643.71339428306 12897.685710914144 13173.776918750105 12756.261555085495 11666.710099844446 12103.416263932655 12328.395993230059 11818.806185116435 13152.668830072209 12716.328821171339 0.9719815900821833 0.9942895919168604 1.0142617332638384 1.0359732831709387 1.0031402722024356 0.9174589823771001 0.9518011396325133 0.9694933314955325 0.9294196738165009 1.0343133631598462 1.0 13.634394607094233 -7.04713239041931 24.385703905938144 0.9617541546214808 1.0060739815480784 0.2244645774154479 0.03324330724492711 286.5895374286532 148277.35116592087 0.004698970377757368 0.008139032333832445 8.971552638158937e-08 7.04713239041931 0.04431982692659753 SAGEEEDGPVLT(ph)DEQK ddPTM_A549_PD325901_60min_R1 1 SAGEEEDGPVLTDEQK 16 0 H7BZV4;A0A0C4DG62;Q66PJ3-4;Q66PJ3-3;F5H7X4;Q66PJ3-7;Q66PJ3;F5GYV5;F8WCT1;Q66PJ3-2 H7BZV4;Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 SAGEEEDGPVLT(1)DEQK 155.98 3.5019e-20 1686400.0 1048.4 1077.4 576.53 1133.2 1070.2 734.98 800.63 952.66 716.13 831.47 1100.0 True False 1154.8327962087121 1168.1962791356295 615.6567927565274 1203.1951903160718 995.0328439895695 728.994566561842 831.0984127715462 933.6584489526882 686.033546509158 778.9708423004425 964.7069734745183 1.19708142261005 1.2109337977813281 0.638180099952174 1.2472131158984028 1.0314353180280522 0.7556642447978507 0.8615034778677266 0.9678155902511985 0.7111315304774033 0.8074688622752224 1.0 9.913946984888296 -7.131619683661082 6.711617960411669 0.8624176592745932 1.0622740593888822 0.280132504232641 0.17104999751208608 0.29690899584684616 15.008532868991745 0.02627387111012944 0.04575245165183829 7.385507038037208e-08 7.131619683661082 0.19985640011428896 SAGGSSPEGGEDS(ph)DREDGNYCPPVK ddPTM_A549_MK2206_60min_R1 2 SAGGSSPEGGEDSDREDGNYCPPVK 25 1 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7EID7;K7ENB9 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 SAGGSSPEGGEDS(1)DREDGNYCPPVK;SAGGSS(0.001)PEGGEDS(0.999)DREDGNYCPPVK 138.52 7.960599999999999e-25 23984000.0 3567.2 4155.0 3654.3999999999996 3484.8 4675.8 4017.8999999999996 3433.6000000000004 3960.8 4839.0 4792.4 5276.9 True False 4169.2561503333445 4366.471752560095 4172.64887080097 4338.576156438618 3987.996013994806 4443.071511133831 4057.4406747617045 4522.255529441278 3742.9742262951277 3709.7935115336477 3966.5000949689565 1.0511171184948567 1.1008374254417532 1.051972462094099 1.0938046268904915 1.0054193668249536 1.1201490999002748 1.0229271593635143 1.1401122957685623 0.9436465742286644 0.935281336874059 1.0 11.953650868191408 -8.775825273953924 24.996403410353192 0.9733886557118593 1.071804298658927 0.5923411206650191 0.04155202438843725 118.18823569213478 205358.71090050536 0.006630976865018032 0.007074277556753409 1.6756168772794294e-09 8.775825273953924 0.09841564294706762 SAGGSSPEGGEDS(ph)DREDGNYCPPVK ddPTM_A549_PD325901_60min_R1 2 SAGGSSPEGGEDSDREDGNYCPPVK 25 1 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7EID7;K7ENB9 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 SAGGSSPEGGEDS(1)DREDGNYCPPVK;SAGGSSPEGGEDS(1)DREDGNYCPPVK 185.44 1.457e-57 29661000.0 9695.4 8790.0 9715.2 8218.6 8563.400000000001 7743.2 9078.0 8703.599999999999 6002.4 8542.5 9205.7 True False 10679.669870623758 9530.764148507682 10374.531894243519 8726.244256205146 7961.936326126219 7680.141946449778 9423.468257672212 8529.999870157888 5750.140001908267 8003.1250921278315 8073.457259740341 1.3228124615063905 1.1805059272481007 1.2850172559874535 1.080855942561316 0.9861867190193425 0.9512829137955685 1.1672159713613557 1.0565485882602208 0.7122277132229722 0.9912884696915121 1.0 12.978970889191745 -6.5864611271724005 0.5289275021701716 0.8802847072805454 1.3468564163846268 0.4846461241371195 0.11700379409577714 0.8843409460065822 0.3531223880360692 0.030719823201936156 0.1993156044681094 2.5914263643479266e-07 6.5864611271724005 0.4665717091040814 SAGGSSPEGGEDS(ph)DREDGNYCPPVKR ddPTM_A549_MK2206_60min_R1 3 SAGGSSPEGGEDSDREDGNYCPPVKR 26 2 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7EID7;K7ENB9 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR 219.67 3.071399999999999e-82 89547800.0 4751.5 6111.77 5299.610000000001 4597.219999999999 6383.92 5897.16 5447.379999999999 4796.870000000001 7723.6 7455.9 7843.8 True False 5553.437036978271 6422.832987519665 6051.17438763834 5723.53910637705 5444.8538247276865 6521.1935569820025 6437.098433971169 5476.841012298267 5974.216932054777 5771.607011652559 5895.967982132977 0.9419042053497059 1.0893602215926697 1.0263241601677107 0.9707547808471056 0.9234876853516949 1.1060429053793535 1.091779747359216 0.9289129501542708 1.013271603604179 0.9789074549154134 1.0 12.525512974606706 -4.978661759649648 15.771471580324697 1.011022071128103 0.7920027959457756 0.10413250009751818 0.059624055848147714 99591331.27200584 1847102661.1899493 0.007652604393908963 528663671.2820306 1.0503601592253817e-05 4.978661759649648 -0.21901927518232744 SAGGSSPEGGEDS(ph)DREDGNYCPPVKR ddPTM_A549_PD325901_60min_R1 3 SAGGSSPEGGEDSDREDGNYCPPVKR 26 2 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7EID7;K7ENB9 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR 245.11 2.1754999999999994e-112 164766000.0 11576.6 12893.500000000002 14214.400000000001 12351.6 11904.3 12575.599999999999 12123.2 13603.0 9555.7 12265.6 12842.8 True False 12751.847909757505 13980.080494742193 15179.07466213098 13114.530279481101 11068.18303560552 12473.18848302689 12584.555010069584 13331.677493652945 9154.10715984187 11491.147922739612 11263.217017216857 1.1321674695839687 1.2412155846213708 1.3476677790127258 1.1643680717005047 0.9826839897239652 1.1074268092287027 1.1173144396341597 1.1836473960569398 0.8127435657014315 1.0202367498712261 1.0 13.459331330583257 -7.839241077289929 0.6895963252999531 0.9185909229255383 1.2170431925998704 0.33184439194883575 0.11198089653509613 0.43348957855026704 0.41867649540926766 0.02780041763927159 0.05041200343917177 1.4479678620465611e-08 7.839241077289929 0.298452269674332 SAGQGEVLVYVEDPAGHQEEAK ddPTM_A549_PD325901_60min_R1 2 SAGQGEVLVYVEDPAGHQEEAK 22 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 0 ; 163.64 5.2601000000000004e-33 10030800.0 4926.4 4425.0 5552.799999999999 5370.5 6196.0 5105.4 5026.2 6695.700000000001 5395.4 5851.0 6150.6 False True 5426.524501376003 4797.91027953885 5929.646399698965 5702.223587709553 5760.814335039596 5063.823315089974 5217.474791442171 6562.1490108249645 5168.6501010089105 5481.56686146209 5394.115191865793 1.0060082716733751 0.8894712309395975 1.0992806398796862 1.0571193578343265 1.0679813333847183 0.9387681083871008 0.9672531278735034 1.2165385382797425 0.9582016544257566 1.016212421590138 1.0 12.397170615460492 SAGS(ph)FK ddPTM_A549_PD325901_60min_R1 2 SAGSFK 6 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 S(0.004)AGS(0.996)FK;S(0.022)AGS(0.978)FK 75.21300000000001 0.045926 48266000.0 17699.4 18365.4 17700.6 15526.599999999999 21976.1 15864.9 15577.599999999999 16374.8 16779.0 20426.1 21769.2 True False 19496.230058390374 19913.116711376904 18901.869158354613 16485.64281853294 20432.574549429253 15735.701514390834 16170.414092389794 16048.191768217897 16073.836980544253 19136.39256005997 19091.72640632862 1.0211873794675619 1.0430233645489497 0.9900555222752893 0.8634967036332658 1.0702318959827626 0.8242157455794404 0.846985429616755 0.840583581948784 0.841926845086991 1.002339555511153 1.0 14.220659946682776 -6.057846420783912 4.762355239175514 0.9121136198152913 1.029666049919302 0.28392970000974904 0.07720652027589886 0.21593086172375056 10.135878818730337 0.011667998672339733 0.033220720629568 8.752932497681394e-07 6.057846420783912 0.11755243010401073 SAGS(ph)FKR ddPTM_A549_PD325901_60min_R1 1 SAGSFKR 7 1 H0Y465;P21359-2;P21359-6;P21359 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 S(0.001)AGS(0.999)FKR 67.563 0.009798399999999999 194660000.0 6275.5 5737.2 5708.2 6124.3 7501.9 6950.7 6367.6 7049.2 6287.3 5861.7 6647.8 True False 6912.584140221073 6220.69397870515 6095.5927781950795 6502.584101705542 6974.992424150023 6894.095803697241 6609.922502484417 6908.598176009581 6023.066645674706 5491.591261636021 5830.162743876275 1.1856588647515407 1.0669846198099822 1.0455270368906253 1.1153349207165006 1.1963632458589981 1.1824877120177253 1.1337457962776707 1.1849751850008035 1.0330872241947358 0.9419276104091823 1.0 12.509320440215857 -8.872917809200642 5.889580143242252 1.0144670433933958 1.1355935618241608 0.6074814525473733 0.0519137676632205 0.11685281340537879 5.623491484549835 0.008912170700104256 0.009446340339711907 1.3399302469856635e-09 8.872917809200642 0.12112651843076505 SAGS(ph)IPGER ddPTM_A549_MK2206_60min_R1 2 SAGSIPGER 9 0 Q04206;Q04206-4;Q04206-3;Q04206-2;A0A087X0W8;E9PKH5;Q2TAM5;E9PQS6;A0A087WVP0;E9PKV4;E9PMD5;E9PI38;E9PNV4;E9PRX2;E9PJR1;E9PM47;E9PN69;E9PNK5;E9PJZ9 Q04206 RELA Transcription factor p65 1 S(0.059)AGS(0.941)IPGER;S(0.046)AGS(0.954)IPGER 57.532 0.013288 9878600.0 2576.0 3328.7 3310.7 2978.9 4292.2 3403.5 3262.5 3539.6000000000004 4555.0 4459.5 4180.9 True False 3010.7658228466867 3498.116611972755 3780.207042622802 3708.730633727902 3660.823065842959 3763.656110939549 3855.2540195159736 4041.349139570374 3523.2997728403197 3452.0958527427383 3142.6671430301326 0.9580288607796155 1.113104395968547 1.2028658685685558 1.1801219998602765 1.164877761223298 1.1975993446479554 1.22674589578035 1.2859615592867846 1.1211177043214269 1.0984605418358933 1.0 11.617773761211815 -9.865626781060358 1.0401048678915912 1.0182867390848722 1.16696837801854 0.19182613735711773 0.08303281345970728 0.3648059081027249 0.8049654814172255 0.0269854028674228 0.01595451053260024 1.3626151678262776e-10 9.865626781060358 0.14868163893366781 SAGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 SAGSLR 6 0 Q8IV53-2;Q8IV53 Q8IV53-2 DENND1C DENN domain-containing protein 1C 1 S(0.007)AGS(0.993)LR;SAGS(1)LR 81.32 0.042338 275750000.0 7876.799999999999 7068.4 6036.2 5997.1 7399.4 5992.1 5284.5 5862.0 5876.700000000001 7443.6 10306.8 True False 8676.446937406312 7664.078874551956 6445.852830619307 6367.527246597699 6879.691670544219 5943.302324274427 5485.604539289356 5745.077811349959 5629.722735774742 6973.609825667276 9039.128940188337 0.9598764432743595 0.8478780339637758 0.7131055296667781 0.7044403602085387 0.7611011764592525 0.657508302359784 0.6068731373993498 0.6355786989393534 0.6228169520566041 0.7714913540686782 1.0 13.141968038030578 -10.868169966675858 1.1292608524372725 0.9991668817477792 0.7126698481570264 0.12352542161591273 0.1192167439513001 0.33700208267089793 0.7665265694690993 0.07487939401390717 0.018352702638421453 1.35465914548746e-11 10.868169966675858 -0.28649703359075285 SAGTDDGFTDFKTADS(ph)VSPLEPPTKDK ddPTM_A549_PD325901_60min_R1 1 SAGTDDGFTDFKTADSVSPLEPPTKDK 27 2 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.004)AGT(0.004)DDGFT(0.017)DFKT(0.087)ADS(0.443)VS(0.443)PLEPPT(0.002)KDK 40.111999999999995 0.019537 2942600.0 1085.3 1430.8 1677.0 2101.2 1460.1 2629.3 1722.6 1782.1 2288.5 2492.7 2130.0 True False 1195.478857044368 1551.378537393037 1790.8113046202213 2230.9863518285656 1357.5476130715476 2607.8878525416353 1788.154485642889 1746.554617469595 2192.3223034731236 2335.3104965931557 1868.0235031824773 0.6399699227593647 0.8304919797582928 0.9586663666539995 1.1943031487707316 0.7267294071829117 1.3960680088332296 0.9572441045824539 0.9349746480673607 1.1736053104996544 1.250150489335161 1.0 10.867296891589476 -5.455344800059297 1.2838293733641584 1.0694807438397722 0.5329811979021442 0.3897160329429935 0.17111851290215102 0.7119197113272223 1.2719304838180931 0.022005516359967354 0.4537548614288885 3.504735115143326e-06 5.455344800059297 -0.536499545937628 SAIRHS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 SAIRHSPSK 9 1 O94964-2;H0YDM2;O94964 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 S(0.003)AIRHS(0.939)PS(0.058)K 47.288000000000004 0.014643000000000002 1293400.0 474.8 282.64 417.39 366.62 498.06 282.88 372.65 427.18 521.68 472.02 524.24 True False 554.9346322545055 297.02516874695186 476.5821782463926 456.44191645819745 424.7960337760923 312.8141738394531 440.3556813402693 487.7340731838828 403.5203129517757 365.39035416787243 394.05673971205175 1.408260730827778 0.753762437774815 1.2094252685403744 1.1583152131638004 1.078007279069767 0.7938302846134166 1.1174930840214774 1.2377254949129501 1.0240157629244946 0.9272531525152276 1.0 8.622259566176162 -4.619254894560015 4.9635787755056135 1.0332257591403415 30.5689426073642 0.34477932220498453 0.14954147637606857 844.2149773779996 189.79327681379715 0.018701315577558993 276506.17095549457 2.4029520540494508e-05 4.619254894560015 29.535716848223856 SAKDGTS(ph)PEEEIEIER ddPTM_A549_MK2206_60min_R1 2 SAKDGTSPEEEIEIER 16 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 S(0.002)AKDGT(0.033)S(0.965)PEEEIEIER;SAKDGT(0.038)S(0.961)PEEEIEIER 124.4 1.1484e-08 54317000.0 7212.299999999999 8381.4 8458.0 7713.5 10884.3 6431.4 6655.1 6042.2 11938.5 12663.7 13897.099999999999 True False 8429.559916194541 8807.977460146138 9657.471581992835 9603.307846272171 9283.233888345023 7111.966479182193 7864.245524990277 6898.700353461444 9234.448811866994 9802.961374678385 10446.06652955203 0.8069601981135415 0.8431860389964279 0.9245079527946475 0.9193228684791844 0.8886822482015272 0.6808272242056248 0.7528427569116323 0.660411297778446 0.8840120619318902 0.9384356635050817 1.0 13.350672176726569 -9.57724663492498 1.3560320668755985 0.9727047468559867 0.8165716965588966 0.31898273605681793 0.08583268272227838 0.31187647777424826 1.1707092868684295 0.023741100019091424 0.017961374539853147 2.646996487935849e-10 9.57724663492498 -0.15613305029709013 SAKDGTS(ph)PEEEIEIER ddPTM_A549_PD325901_60min_R1 1 SAKDGTSPEEEIEIER 16 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 S(0.05)AKDGT(0.087)S(0.863)PEEEIEIER 69.581 0.00045878 22955000.0 7153.4 6250.8 6265.0 6551.2 7530.5 8155.6 6360.2 7207.4 10001.0 7901.1 9276.5 True False 7879.607901945245 6777.57685318451 6690.18057450548 6955.852745145293 7001.5836588146685 8089.183497580562 6602.240891434984 7063.642752904077 9580.692749414342 7402.223197589835 8135.549308578517 0.9685403656316858 0.8330816514181659 0.822339134181269 0.8549948480812113 0.8606159698930052 0.9943008383036822 0.8115298231274023 0.8682441080476065 1.1776331733755205 0.9098615123363055 1.0 12.990024043959698 -8.74590712564486 24.999189072097074 1.0838823287442583 0.8739267133766504 0.34721665387136 0.08439154428722581 119.02024083665947 191563.17763205306 0.013564656304455526 0.015354063799797323 1.7951174736445692e-09 8.74590712564486 -0.20995561536760787 SALAPNLLT(ph)SGK ddPTM_A549_MK2206_60min_R1 1 SALAPNLLTSGK 12 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.5)S(0.5)GK 129.37 8.4976e-08 5438000.0 3841.0 4181.0 3649.8 3775.4 5486.4 3561.4 3524.8 3974.2 5679.7 5727.7 4697.1 True False 4489.266896566042 4393.7950415051155 4167.396521631291 4700.373169484148 4679.357827790132 3938.2649841340076 4165.2105342497825 4537.555020477057 4393.25701861716 4433.808591939585 3530.6804366348947 1.2715019037080513 1.2444612647223487 1.1803380669600483 1.3312938550632727 1.325341647812807 1.1154407924517755 1.1797189264230497 1.2851786226231843 1.244308879679972 1.2557943635832036 1.0 11.785730532736213 -10.741019394922384 0.5987742760824127 0.961874862538145 1.2456851338773494 0.0 0.09773519235683854 0.5530644683159851 0.27929967884090046 0.08584207987808445 0.013655746977447727 1.8154345864514373e-11 10.741019394922384 0.28381027133920433 SALAPNLLT(ph)SGK ddPTM_A549_PD325901_60min_R1 1 SALAPNLLTSGK 12 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.5)S(0.5)GK 151.74 2.212e-12 11557000.0 5128.5 5672.5 5289.6 5785.2 6251.2 5240.9 6111.0 6093.5 5650.2 5848.2 6535.9 True False 5649.141544597844 6150.541482640483 5648.584064948794 6142.53866485752 5812.137277469259 5198.219848014854 6343.5574490675135 5971.960362241723 5412.74174309978 5478.943653939943 5732.025734483731 0.9855401574024244 1.0730135849947378 0.985442900398553 1.0716174262624387 1.0139761310741469 0.9068730827118389 1.1066868403791041 1.0418586096560158 0.9442982278563151 0.9558477068549689 1.0 12.484829371395557 -8.75346262741294 24.997564867564357 0.9736963847681429 1.0237545398736598 0.18224963536550076 0.05264163452001145 243.33783221844047 762572.1090635039 0.008811035377510231 0.009903860390033395 1.7641575699871811e-09 8.75346262741294 0.05005815510551692 SALAPNLLT(ph)SGKK ddPTM_A549_MK2206_60min_R1 1 SALAPNLLTSGKK 13 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.585)S(0.415)GKK 79.771 0.00045462 19815000.0 1992.1 2102.0 2303.1 2198.7 3134.0 2458.0 1868.0 2214.0 3366.1 2354.6 2446.3 True False 2328.3177778310874 2208.9828216320857 2629.714211455153 2737.381598703395 2672.9927515846957 2718.1039285116517 2207.391420216349 2527.841280090634 2603.683724557145 1822.6942246592794 1838.8161955546934 1.2662047372977003 1.2013070294748673 1.4301126006027367 1.4886651560503807 1.4536486887849964 1.4781814164366298 1.2004415805955375 1.3747112333476543 1.4159564892083862 0.991232418479678 1.0 10.84456156266402 -10.763842777497768 0.779216818756717 0.9727938759842754 1.3732849641556326 0.6743521827754839 0.09929463295938036 0.3986662784639145 0.3815178946066503 0.10163207406382771 0.019848756115294207 1.7224920355760368e-11 10.763842777497768 0.40049108817135726 SALAPNLLTS(ph)GK ddPTM_A549_MK2206_60min_R1 1 SALAPNLLTSGK 12 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.343)S(0.657)GK 117.93 2.0735e-05 5440600.0 2608.9 2852.3 3167.7 2740.9 3792.5 2495.8 2878.3 3204.8 3710.0 4279.1 4297.2 True False 3049.2185385189123 2997.4698868416767 3616.9274923479175 3412.420623043675 3234.628273894373 2759.9038994220437 3401.2498526813265 3659.090214288377 2869.6909236525994 3312.448338035981 3230.0866433134242 0.9440051847621718 0.9279843601244302 1.1197617561854847 1.056448634313788 1.001406039862847 0.8544364917069014 1.05299028424585 1.1328148803262073 0.8884253707537917 1.0254982927139287 1.0 11.657357148715064 SALAPNLLTS(ph)GK ddPTM_A549_PD325901_60min_R1 1 SALAPNLLTSGK 12 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.03)S(0.97)GK 141.37 1.1148e-11 10844000.0 4652.9 4267.5 4303.7 5165.9 5287.9 4863.6 5155.2 5925.7 5739.9 5340.0 5413.5 True False 5125.258982716061 4627.137201792555 4595.774962250473 5484.985910389863 4916.496146264664 4823.992454121439 5351.383957033684 5807.50726487828 5498.671964039929 5002.831488669899 4747.673819003918 1.0795305613036748 0.9746114367147801 0.9680056249556518 1.1552996518915524 1.0355589565957517 1.0160749533407358 1.1271591438344488 1.2232321524768774 1.1581823380599414 1.0537437236409628 1.0 12.213005105094664 -7.753760896511002 24.988904519693556 1.093674730611949 1.0373054182773673 0.18807031725353274 0.07219254017181613 353.663346178136 1150961.114018975 0.013515595964874628 0.019835068457750397 1.7629463802110248e-08 7.753760896511002 -0.056369312334581645 SALAPNLLTS(ph)GKK ddPTM_A549_MK2206_60min_R1 1 SALAPNLLTSGKK 13 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.154)S(0.846)GKK 87.932 8.0535e-05 17961000.0 1722.8 1937.7 1987.3 1579.0 2513.2 1804.1 1860.1 1537.8 2552.4 2497.1 2565.5 True False 2013.566521583956 2036.3206534141273 2269.129022806143 1965.8550708840041 2143.511609215908 1995.0086645353422 2198.056092475607 1755.7878593149844 1974.2854753452548 1933.003375688731 1928.4155458020546 1.0441559268526255 1.055955319301885 1.1766805280873116 1.0194146563293638 1.111540307731958 1.0345325564701309 1.1398249185765639 0.9104821121864209 1.0237863305152533 1.0023790670515302 1.0 10.913200249752162 -8.244096176678354 24.951982657329552 1.0039900026318616 1.0824783043528061 0.4329441191548109 0.052750983870373344 650.7163952511838 936197.9780721366 0.007789843622574982 0.010045339197986244 5.700380205399392e-09 8.244096176678354 0.07848830172094456 SALAPNLLTS(ph)GKK ddPTM_A549_PD325901_60min_R1 2 SALAPNLLTSGKK 13 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.036)S(0.964)GKK;SALAPNLLT(0.139)S(0.861)GKK 121.82 3.5083e-06 68433000.0 12936.5 12880.0 14585.2 13578.5 17593.5 15384.7 14528.4 14563.5 15322.9 15248.9 15531.0 True False 14249.80395665204 13965.442802363932 15575.039379932528 14417.213105989042 16357.793254280034 15259.41210398102 15081.286212245537 14273.019567655263 14678.931799820104 14286.08185160645 13620.785459120672 1.0461807800599463 1.0253037788663262 1.1434758609683011 1.0584714919164275 1.200943462722748 1.1203033885070923 1.1072258833756825 1.0478852053350451 1.0776861469461647 1.0488442017152753 1.0 13.733522280058358 -10.106470505838708 0.5733392179961151 0.9978640204673106 1.0982381967405157 0.21279924447476772 0.049346842838477394 0.7692423126053911 0.47573370932817405 0.036698147690991785 0.011673127490000235 7.825813505653229e-11 10.106470505838708 0.1003741762732051 SALLTQNGTGS(ph)LPR ddPTM_A549_MK2206_60min_R1 1 SALLTQNGTGSLPR 14 0 Q86UU1-2;Q86UU1;Q86UU1-3;A0A087WZL0 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 SALLT(0.002)QNGT(0.283)GS(0.715)LPR 98.507 3.845e-05 2994100.0 2381.5 2356.7 2293.9 2228.1 3283.1 2755.1 2162.7 1955.8 3297.8 2920.4 3462.5 True False 2783.4389779151334 2476.645963720429 2619.2095131157903 2773.9846000232083 2800.1603390962714 3046.6428533126323 2555.6345955577613 2233.0406393862986 2550.8535655044575 2260.6796116941136 2602.6656898614724 1.0694569758835537 0.9515805173780306 1.0063564918532424 1.0658244010473947 1.0758816816174768 1.1705855520286936 0.9819296444845307 0.8579821250516246 0.9800926701578132 0.8686016112251586 1.0 11.345774295384658 -7.951777782243159 24.99988904743961 0.9775122176898462 1.0529673373507429 0.36189779804327005 0.07000617143879499 130.233986780372 67516.97851954163 0.01019165815945399 0.014081796886147467 1.117434865340383e-08 7.951777782243159 0.07545511966089669 SALLTQNGTGS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 SALLTQNGTGSLPR 14 0 Q86UU1-2;Q86UU1;Q86UU1-3;A0A087WZL0 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 SALLTQNGT(0.063)GS(0.937)LPR;SALLTQNGT(0.03)GS(0.97)LPR 167.71 1.9224e-22 18306800.0 7686.4 8336.9 8144.1 8668.6 10675.5 9024.7 8566.1 9578.5 9488.3 8636.5 10368.7 True False 8466.717669571386 9039.4798213531 8696.807600451726 9204.039734180997 9925.689708475657 8951.205835329743 8892.087623049783 9387.449303312114 9089.539747452054 8091.1899160856865 9093.415632604769 0.9310822260464666 0.9940686961389645 0.9563851419337976 1.0121652969627366 1.0915249131345914 0.9843612342137835 0.9778600233741526 1.032334788443308 0.9995737701531185 0.8897855594628749 1.0 13.150606580251978 -6.263060020023483 24.809066735273877 1.0066633501489646 0.9638676878099306 0.09306579565821083 0.04768824101134985 130.01525710302133 1990322.510064466 0.004418334841865107 0.010746923337717389 5.456824419053944e-07 6.263060020023483 -0.04279566233903398 SALNLNQPVSVS(ph)SVSPVKATQK ddPTM_A549_MK2206_60min_R1 1 SALNLNQPVSVSSVSPVKATQK 22 1 Q86XJ1;G3V1N3;H0YIT6 Q86XJ1 GAS2L3 GAS2-like protein 3 1 SALNLNQPVS(0.038)VS(0.304)S(0.304)VS(0.304)PVKAT(0.051)QK 64.035 0.00014736 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SALNLNQPVSVSS(ph)VSPVK ddPTM_A549_PD325901_60min_R1 1 SALNLNQPVSVSSVSPVK 18 0 Q86XJ1;G3V1N3;H0YIT6 Q86XJ1 GAS2L3 GAS2-like protein 3 1 SALNLNQPVSVS(0.028)S(0.655)VS(0.317)PVK 185.33 9.720599999999999e-40 11667000.0 1723.7 1711.5 1693.7 1522.6 2105.1 2353.6 1474.5 1344.0 1970.7 2019.9 2090.2 True False 1898.6887550791264 1855.7341115097736 1808.6446670454798 1616.6475439245062 1957.2450382007496 2334.4330619335924 1530.6129043773597 1317.1928656523962 1887.8783322938543 1892.3631692817085 1833.1186508694902 1.03576970000198 1.0123371504782608 0.9866489908809766 0.881911022594033 1.067713231367966 1.2734762481557411 0.8349775414981212 0.7185529780233382 1.029872415186213 1.0323189763980183 1.0 10.840084453781058 -5.483258495804237 3.5500515661477015 0.9934771542173119 1.033774833662203 0.009170695886715707 0.13484228457214106 1.579608190320728 38.34097044872394 0.018556635823116556 0.12276627138071966 3.2865595380206464e-06 5.483258495804237 0.040297679444891155 SALNLNQPVSVSS(ph)VSPVKATQK ddPTM_A549_PD325901_60min_R1 1 SALNLNQPVSVSSVSPVKATQK 22 1 Q86XJ1;G3V1N3;H0YIT6 Q86XJ1 GAS2L3 GAS2-like protein 3 1 SALNLNQPVS(0.017)VS(0.081)S(0.511)VS(0.391)PVKATQK 105.46 1.5521e-10 4376200.0 1562.6 1599.0 1903.0 2050.7 2549.3 2273.7 2375.8 2524.7 2319.9 2165.9 2403.7 True False 1721.2340016746787 1733.7533416909887 2032.149023668623 2177.3670815223863 2370.2459626075597 2255.183741042832 2466.2123690876438 2474.3428779111637 2222.402670669566 2029.1447043651945 2108.0601383097264 0.8165013750768938 0.8224401715034266 0.963990062113707 1.0328771186140027 1.124373028801758 1.0697909893837618 1.1698965908368673 1.1737534584260618 1.0542406406164109 0.9625649038609461 1.0 11.0417003091342 -5.927789926675985 2.144309806582952 1.0578968719595319 0.8085182688104727 0.7049988370060656 0.06300472101478637 0.15301639068276776 1.3577079651325974 0.009864052216624597 0.04382526311120351 1.1808917086642525e-06 5.927789926675985 -0.24937860314905913 SALNLNQPVSVSSVS(ph)PVK ddPTM_A549_MK2206_60min_R1 4 SALNLNQPVSVSSVSPVK 18 0 Q86XJ1;G3V1N3;H0YIT6 Q86XJ1 GAS2L3 GAS2-like protein 3 1 SALNLNQPVSVS(0.013)S(0.299)VS(0.688)PVK;SALNLNQPVS(0.001)VS(0.021)S(0.166)VS(0.812)PVK;SALNLNQPVSVS(0.008)S(0.038)VS(0.954)PVK;SALNLNQPVSVS(0.002)S(0.146)VS(0.852)PVK 206.21 2.2660999999999996e-49 9598300.0 4630.92 4849.24 5063.219999999999 3660.67 5415.4 4594.9400000000005 3881.63 4568.04 6660.299999999999 6486.499999999999 7730.099999999999 True False 5412.506080876234 5096.045603221304 5781.260731068542 4557.53431433372 4618.801833737 5081.173500925681 4586.87192636745 5215.57365903578 5151.752684313585 5021.195144930099 5810.502830093338 0.9315039057969599 0.8770403788168266 0.9949673720364874 0.78436143094702 0.7949057024489575 0.8744808581125945 0.7894104969042357 0.8976114135980894 0.8866276869588632 0.8641584543982469 1.0 12.504447301836205 -10.228596079531897 0.6982050311393023 0.9992837857600257 0.8659474580082828 0.0 0.07156439811136864 0.560725084284254 0.5135708527284468 0.038966282443195624 0.012868271337390444 5.907502586706321e-11 10.228596079531897 -0.13333632775174298 SALNLNQPVSVSSVS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 SALNLNQPVSVSSVSPVK 18 0 Q86XJ1;G3V1N3;H0YIT6 Q86XJ1 GAS2L3 GAS2-like protein 3 1 SALNLNQPVS(0.001)VS(0.06)S(0.275)VS(0.665)PVK 166.6 1.0815e-23 7864900.0 1696.4 1320.7 1263.3 1445.6 1908.9 1183.9 1318.1 1885.7 1672.6 1516.2 1685.9 True False 1868.6172791763256 1432.0000239970527 1349.035134840027 1534.8914288041951 1774.8254493474965 1174.2587109207934 1368.261016791995 1848.088234196968 1602.3064386231792 1420.4668732436887 1478.5449878006289 1.2638217264906755 0.9685197513855748 0.9124072287085083 1.038109385557069 1.2003865042940574 0.794198837782766 0.9254104731891291 1.249937099949893 1.0837048935566367 0.9607194133177288 1.0 10.529962425779738 -12.735219307716955 14.689344407154497 1.043481684348571 1.039029858631753 0.0 0.14287894948729338 0.0 0.0 0.0 0.017333529910777037 1.8398426928752601e-13 12.735219307716955 -0.004451825716818014 SALNLNQPVSVSSVS(ph)PVKATQK ddPTM_A549_MK2206_60min_R1 1 SALNLNQPVSVSSVSPVKATQK 22 1 Q86XJ1;G3V1N3;H0YIT6 Q86XJ1 GAS2L3 GAS2-like protein 3 1 SALNLNQPVS(0.012)VS(0.108)S(0.093)VS(0.771)PVKAT(0.016)QK 72.22 2.2209e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SALPVS(ph)PSISSAPVPVEIENLPQS(ph)PGTDQHDRK ddPTM_A549_PD325901_60min_R1 1 SALPVSPSISSAPVPVEIENLPQSPGTDQHDRK 33 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 2 S(0.034)ALPVS(0.905)PS(0.048)IS(0.012)S(0.001)APVPVEIENLPQS(0.847)PGT(0.153)DQHDRK 75.649 6.2938e-06 3236100.0 854.87 793.02 887.99 696.63 1205.9 987.06 761.78 999.07 880.61 997.9 996.22 True False 941.6557730779674 859.8505785039315 948.254341317656 739.65925293848 1121.201744129155 979.0217106187 790.7699547620108 979.1427650947467 843.601024103765 934.8924236973207 873.6912555588958 1.0777900855555604 0.9841583889424297 1.0853426027608146 0.8465911135453951 1.2832928531623313 1.1205579824561993 0.9050908427098304 1.120696537666952 0.9655596513485966 1.0700489649507534 1.0 9.77097974093464 -8.799284778111451 24.99347558735239 0.9837364874950615 1.0498532654208996 0.008634041657032743 0.11329132672460258 334.709709306015 221044.10743276772 0.018204742237344522 0.019380646865992626 1.5875054388999753e-09 8.799284778111451 0.06611677792583814 SALPVSPSISSAPVPVEIENLPQS(ph)PGTDQHDR ddPTM_A549_MK2206_60min_R1 1 SALPVSPSISSAPVPVEIENLPQSPGTDQHDR 32 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 SALPVS(0.002)PS(0.005)IS(0.016)S(0.016)APVPVEIENLPQS(0.894)PGT(0.067)DQHDR 40.254 0.021736000000000002 1480400.0 250.95 423.26 410.11 201.18 272.32 229.43 343.44 403.77 395.17 444.25 721.77 True False 293.30422486155913 444.8021261103696 468.2697647778532 250.46910903131345 232.26208874012266 253.70813031669167 405.83860244063357 461.0056339937646 305.6646259568187 343.8936164549752 542.5345891613907 0.540618479855684 0.8198594799235038 0.8631150421241703 0.4616647749933692 0.42810558696199624 0.4676349404908075 0.748041895481629 0.8497257929791214 0.5634011767420989 0.6338648693100658 1.0 9.083571308937078 -10.921972563643056 0.7515564794483804 1.048128855693429 0.6343177213947341 0.0 0.18789452562245004 0.7670307155109011 0.6134617776324844 0.207201896459194 0.0310291115717751 1.1968161372357532e-11 10.921972563643056 -0.41381113429869487 SALPVSPSISSAPVPVEIENLPQS(ph)PGTDQHDR ddPTM_A549_PD325901_60min_R1 1 SALPVSPSISSAPVPVEIENLPQSPGTDQHDR 32 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 SALPVS(0.001)PS(0.003)IS(0.013)S(0.012)APVPVEIENLPQS(0.866)PGT(0.105)DQHDR 58.534 0.00075108 4157100.0 405.91 757.85 809.57 806.13 542.55 1052.0 735.91 931.47 770.59 752.2 865.88 True False 447.1176843848513 821.716679174806 864.5122885398877 855.9228192459361 504.4431596958899 1043.4328607894881 763.9154577554034 912.891100125921 738.2047820989093 704.7059636287448 759.3822492655601 0.588791329817471 1.082085708442004 1.1384415284608043 1.1271304011566583 0.6642809470247222 1.3740548476062602 1.0059696002826346 1.2021496433565937 0.9721122436202154 0.9279989943276977 1.0 9.568682465798025 -5.257051190484935 24.492976301584033 1.0280060237083009 0.5887910953396087 0.36921234547021364 0.1710165999275259 261.7177896090133 1460722.0168320374 0.021011939632088153 0.22760337566622116 5.532848894345491e-06 5.257051190484935 -0.43921492836869214 SALPVSPSISSAPVPVEIENLPQS(ph)PGTDQHDRK ddPTM_A549_MK2206_60min_R1 2 SALPVSPSISSAPVPVEIENLPQSPGTDQHDRK 33 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 SALPVSPSISSAPVPVEIENLPQS(0.802)PGT(0.198)DQHDRK;SALPVSPSISSAPVPVEIENLPQS(0.866)PGT(0.134)DQHDRK 166.13 3.3007e-52 20772300.0 2666.1 3937.2 3526.8 3243.2 4612.299999999999 3945.5 2835.1000000000004 3610.8 5304.9 4642.299999999999 4988.4 True False 3116.0725001131796 4137.58666285911 4026.953272094152 4037.78414559278 3933.8367798768627 4363.010191189064 3350.200971871184 4122.6419576112285 4103.34862018455 3593.601205782626 3749.642607163892 0.8310318679865001 1.103461608568782 1.073956559059907 1.0768450672814465 1.0491231277245083 1.1635802790520091 0.8934720779709635 1.099475973986081 1.0943305936264123 0.958384993523612 1.0 11.872537378018912 -5.253343627098147 24.414240717293776 1.0536585604917146 0.8310317139075832 0.4362595309712005 0.07192343096921654 470.708623704549 1419462.8427745253 0.008762486598082186 0.13310075546217398 5.580284907786186e-06 5.253343627098147 -0.22262684658413134 SALS(ph)PSKS(ph)PAK ddPTM_A549_MK2206_60min_R1 4 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 2 S(0.017)ALS(0.979)PS(0.231)KS(0.773)PAK;S(0.03)ALS(0.879)PS(0.113)KS(0.978)PAK;S(0.039)ALS(0.955)PS(0.13)KS(0.876)PAK;S(0.004)ALS(0.793)PS(0.287)KS(0.916)PAK 58.32 0.0033726999999999997 89278100.0 12834.4 13957.2 13625.4 13131.400000000001 18304.899999999998 13426.4 13320.5 13923.900000000001 20221.1 20308.2 19905.4 True False 15000.532949046397 14667.561863978757 15557.686603604305 16348.593589490942 15612.27345835441 14847.172736276982 15740.66242665518 15897.655465155376 15641.053136461333 15720.563515342546 14962.339818907898 1.0025526174783328 0.9802986726343008 1.0397896847620094 1.092649531247194 1.0434379680793768 0.9923028694692938 1.0520187762854922 1.062511322264284 1.0453614425128712 1.05067547626986 1.0 13.869048181859132 -5.764139041317616 24.99623343741497 1.0317926158146542 0.9914256399135442 0.2736938377760535 0.0279843700578746 77.93587173347859 721647.4509045023 0.004359904768776584 0.014518502844031656 1.7213173993085312e-06 5.764139041317616 -0.04036697590111005 SALS(ph)PSKSPAK ddPTM_A549_MK2206_60min_R1 2 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 S(0.016)ALS(0.964)PS(0.02)KS(0.001)PAK;S(0.001)ALS(0.898)PS(0.099)KS(0.002)PAK 85.288 0.00036781 10334100.0 1392.9 1398.63 1722.29 1491.85 1651.03 1590.12 1553.26 1265.35 2079.16 2031.1799999999998 2290.3 True False 1627.9874668645762 1469.8142929682613 1966.5366198806396 1857.3533169716923 1408.1656741062159 1758.3854429637693 1835.4672362769004 1444.717237471854 1608.233579736263 1572.3350272842233 1721.5553009356643 0.9456492428560186 0.8537711755000946 1.142302323260733 1.0788810071696342 0.8179613360900336 1.0213935282869437 1.0661680372854274 0.8391930463614217 0.9341748004622268 0.9133224047055939 1.0 10.749496809516598 SALS(ph)PSKSPAK ddPTM_A549_PD325901_60min_R1 4 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 S(0.005)ALS(0.766)PS(0.229)KSPAK;SALS(0.754)PS(0.238)KS(0.008)PAK;S(0.001)ALS(0.894)PS(0.101)KS(0.004)PAK;S(0.001)ALS(0.797)PS(0.169)KS(0.033)PAK 110.44 2.33e-05 192245200.0 13486.699999999999 12310.659999999998 13403.759999999998 13969.710000000001 15193.58 16390.8 15196.8 16451.1 14798.9 13876.96 16931.3 True False 14855.859855616214 13348.122522465032 14313.41975695666 14832.587259186677 14126.435355805494 16257.318759152422 15775.122540008042 16122.969904861713 14176.95369756103 13000.766377343192 14848.857436353741 1.0004715796681656 0.8989326336843579 0.9639408162081081 0.9989042808689623 0.9513483051713072 1.0948531783563638 1.0623795539572338 1.0858054213241097 0.9547504754710809 0.8755398476325891 1.0 13.858064304897194 -6.16392531900098 3.7404563483363833 0.9993599425850678 0.9461574861678083 0.10028983270864211 0.0642750441220473 0.3844429134296074 9.859618716317726 0.008076096342447946 0.02303838637616127 6.856061127015237e-07 6.16392531900098 -0.053202456417259514 SALSLSKS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 SALSLSKSPAK 11 1 J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 J3KNE0;Q99666 RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 SALSLS(0.003)KS(0.997)PAK;SALS(0.004)LS(0.005)KS(0.992)PAK 95.264 7.9541e-05 68148000.0 13557.599999999999 15957.9 13663.9 13683.5 16131.2 14464.7 14717.5 14470.5 18364.6 20377.0 19014.4 True False 15845.791428503959 16770.088948298137 15601.64648252446 17035.95811427565 13758.321848871434 15995.344953109221 17391.479243594295 16521.737689047663 14205.047422240024 15773.821547558884 14292.59970925689 1.1086710431161877 1.1733407000432994 1.091589130032078 1.1919425759361306 0.9626185668630025 1.1191347465464603 1.2168170659904756 1.1559644868768715 0.993874292375224 1.103635578441524 1.0 13.802980734508797 -8.768352764187709 24.994476200736077 0.9971072929927658 1.1271892596577315 0.22365584732019028 0.07090960247944512 99.78036074330115 360742.34210890695 0.010755887901469462 0.011571936419373078 1.7046971528804824e-09 8.768352764187709 0.13008196666496574 SALSLSKS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 SALSLSKSPAK 11 1 J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 J3KNE0;Q99666 RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 SALSLS(0.003)KS(0.997)PAK;SALSLS(0.002)KS(0.998)PAK 126.71 2.3878e-07 109753000.0 21867.9 22018.1 22863.0 23052.7 28298.0 22407.3 25246.0 24870.7 25826.3 23594.6 26218.0 True False 24087.913109702877 23873.642559528656 24414.620666387673 24476.612922519675 26310.44610280028 22224.822377916633 26206.750345141278 24374.634377813298 24740.910424377493 22104.83292932036 22993.35220959538 1.0476033633604205 1.0382845590285839 1.061812146564657 1.0645082413126918 1.1442631706315811 0.9665759988072539 1.1397533559375874 1.0600731096373799 1.076002759356369 0.9613575579508484 1.0 14.488929191999855 -10.716095304942469 0.8948909053569566 0.9985757134519471 1.0671347895786891 0.3097732511221478 0.0472097933242717 0.6900996145069295 0.949767424168574 0.031553785922544764 0.007550366943067801 1.9226697570788635e-11 10.716095304942469 0.06855907612674206 SALSPS(ph)KSPAK ddPTM_A549_PD325901_60min_R1 4 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 SALS(0.366)PS(0.628)KS(0.006)PAK;S(0.006)ALS(0.379)PS(0.614)KS(0.001)PAK;SALS(0.01)PS(0.573)KS(0.417)PAK;S(0.001)ALS(0.012)PS(0.64)KS(0.348)PAK 109.83 2.6389e-05 675878800.0 22902.5 21839.399999999998 23023.6 22390.300000000003 27497.6 27455.5 26442.0 27369.0 27463.1 26488.5 27275.2 True False 25227.544940070617 23679.882883380957 24586.119948153922 23773.29797893924 25566.26343757017 27231.911510842005 27448.264779617602 26823.10382443486 26308.921412502845 24816.011589444304 23920.523311738343 1.054640177027017 0.9899400015116183 1.027825337587366 0.993845229434138 1.0688003395404073 1.1384329329232814 1.1474776041437236 1.1213426844751408 1.0998472345123178 1.0374359818987122 1.0 14.54596133141788 -6.777817427357904 23.542256490076866 1.0698589386951893 1.0154655524064502 0.31612590273751584 0.045742334910903265 172.21190262725656 247542.38426341442 0.008646966890474178 0.01638247278064628 1.6679482523573912e-07 6.777817427357904 -0.05439338628873913 SALSPSKS(ph)PAK ddPTM_A549_MK2206_60min_R1 3 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 SALS(0.002)PS(0.071)KS(0.927)PAK;SALS(0.002)PS(0.149)KS(0.849)PAK;SALS(0.001)PS(0.024)KS(0.975)PAK 76.52199999999999 0.0010159 180791700.0 3584.6499999999996 4238.25 4062.7999999999997 3751.92 5286.08 3685.91 3636.78 3912.38 6080.17 5887.5 5293.9 True False 4189.651283721802 4453.9588219705975 4638.966131865748 4671.140568430089 4508.504634427834 4075.950549690961 4297.535850757181 4466.971846161243 4703.021203036341 4557.509660953666 3979.2785257928267 1.0528670603390502 1.1192880300036792 1.1657807066775971 1.1738662016626285 1.132995492827325 1.024293857107897 1.079978650125011 1.122558226876378 1.1818778636761338 1.1453105459728112 1.0 11.958291167286843 -10.993176502714991 1.2668770595552201 0.9999459698307456 1.1237200054928644 0.0 0.06326573190918804 0.3500942099685082 0.9992605575709298 0.037241547711763336 0.008501273276423233 1.0158357605941676e-11 10.993176502714991 0.12377403566211886 SALSPSKS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 SALSPS(0.02)KS(0.98)PAK;SALS(0.002)PS(0.077)KS(0.921)PAK 97.911 0.00023068 13879100.0 1768.27 1597.5700000000002 1929.3 1812.6799999999998 2144.5 2245.8 1992.6999999999998 1976.75 1717.1999999999998 1916.6399999999999 2171.3999999999996 True False 1947.783468668426 1732.2028305724036 2060.2338998233713 1924.6451267050268 1993.8777181233716 2227.510949392616 2068.53328894728 1937.3221705196245 1645.032055723857 1795.6230233041717 1904.331565638699 1.0228174041820042 0.9096119929049411 1.0818672215478315 1.0106670295408955 1.0470223537226508 1.1697075181577032 1.0862253854693151 1.0173239815356738 0.8638369942537424 0.9429151181989324 1.0 10.895068974682607 -8.575495285413156 8.520178884639265 0.9358040325555024 1.046656124933922 0.3516500483271554 0.06602126179715431 0.25631805843128197 37.908732418871615 0.013089420584183057 0.014851322954380124 2.6576924006084646e-09 8.575495285413156 0.11085209237841953 SALSPSKS(ph)PAKLNQSGTSVGTDEESDVTQEEER ddPTM_A549_MK2206_60min_R1 1 SALSPSKSPAKLNQSGTSVGTDEESDVTQEEER 33 2 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 S(0.001)ALS(0.025)PS(0.147)KS(0.816)PAKLNQS(0.005)GT(0.005)S(0.001)VGTDEESDVTQEEER 116.35 1.4408e-21 5344300.0 479.38 635.51 818.58 747.45 916.47 683.82 606.44 630.46 1454.7 933.44 827.02 True False 560.2876242842559 667.8547445173201 934.666952895211 930.5752835543062 781.6584770404683 756.1813785170208 716.6222981134925 719.8296357027735 1125.2127726785543 722.5752556977653 621.6481094091654 0.9012938603107336 1.0743292457722924 1.5035305967286685 1.4969486265127634 1.2573970148214269 1.216413863521149 1.1527780544440065 1.1579374646323997 1.8100477676156583 1.1623541433826998 1.0 9.279954348153936 SALSS(ph)SLRDLSEAGK ddPTM_A549_MK2206_60min_R1 1 SALSSSLRDLSEAGK 15 1 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SALS(0.015)S(0.492)S(0.492)LRDLSEAGK 91.725 8.0414e-06 13228000.0 4444.3 4009.3 4405.7 4028.6 5289.0 4076.9 3947.1 4039.6 6161.3 6707.5 6691.9 True False 5194.389187297175 4213.356244895114 5030.494508014402 5015.607180850726 4510.9951062959335 4508.314851972804 4664.236977910041 4612.225670756153 4765.77538757433 5192.271091438934 5030.1165429556695 1.0326578207360937 0.8376259692820892 1.0000751404178223 0.9971155018017896 0.8967973341717639 0.8962644927752991 0.9272622091513928 0.9169222286142169 0.9474483040056932 1.0322367378764514 1.0 12.29637611093472 -10.140372389645057 0.8378464368210797 0.9965467815167812 0.9362980229079579 0.2131233868820085 0.053943593399542994 0.7385954888090146 1.0248540600189333 0.023536016579607764 0.009850979765248048 7.238150522925084e-11 10.140372389645057 -0.06024875860882328 SALSS(ph)SLRDLSEAGKR ddPTM_A549_MK2206_60min_R1 2 SALSSSLRDLSEAGKR 16 2 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 S(0.003)ALS(0.207)S(0.395)S(0.395)LRDLSEAGKR;S(0.001)ALS(0.099)S(0.548)S(0.352)LRDLSEAGKR 66.12 0.00053682 35723000.0 2568.7 3266.6 3048.4 2896.0 4300.5 3007.3 2828.3 2509.3 4598.0 4566.3 4418.1 True False 3002.2337613145487 3432.855987223299 3480.7089584472624 3605.520130006381 3667.9021468379033 3325.5304899158205 3342.1654998918125 2865.0009594089547 3556.5603414972093 3534.769658566917 3320.9638366431714 0.9040248280298063 1.0336926735984058 1.0481020359335083 1.085684851555276 1.1044691623457776 1.001375098765684 1.006384189738745 0.8627016433593255 1.070942207275638 1.064380653461093 1.0 11.697386297481744 SALSS(ph)SLRDLSEAGKR ddPTM_A549_PD325901_60min_R1 2 SALSSSLRDLSEAGKR 16 2 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SALS(0.012)S(0.494)S(0.494)LRDLSEAGKR;S(0.001)ALS(0.105)S(0.81)S(0.084)LRDLSEAGKR 111.77 7.389999999999999e-08 35484000.0 3533.2 3468.0 4165.8 4265.8 4566.9 4515.7 4385.6 5225.200000000001 5166.5 4598.8 4948.1 True False 3891.8878629956303 3760.2605309470564 4448.516238990409 4529.288777665283 4246.136698949697 4478.925636375565 4552.496407892403 5120.979286909899 4949.369971987716 4308.43098316388 4339.515068590239 0.8968485652153692 0.866516297676698 1.025118283650892 1.043731547436865 0.9784818422877658 1.0321258402337143 1.0490795252316878 1.1800810012104719 1.1405352657516172 0.9928369679710648 1.0 12.083318118293034 -5.688889605805191 0.7086039418250167 1.0726759045802587 0.806589184373878 0.5072540697794826 0.06108629006065235 1.179043065594609 0.5749350894486228 0.011605776151265063 0.2215977773963256 2.046964892755346e-06 5.688889605805191 -0.2660867202063807 SALSSS(ph)LR ddPTM_A549_MK2206_60min_R1 1 SALSSSLR 8 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SALS(0.011)S(0.111)S(0.878)LR 93.598 0.0025561 27051000.0 1425.2 1155.4 1581.8 1512.1 2526.2 1986.9 1513.4 1802.4 2264.0 1973.5 2164.5 True False 1665.7389172053947 1214.20492488759 1806.1230253483398 1882.5645678807489 2154.5993264369035 2197.152439202522 1788.3651902330964 2057.895719618501 1751.20761486509 1527.6849793447245 1626.9949128390351 1.0238132301832175 0.7462868600915632 1.110097524642369 1.1570807954130329 1.3242815385803646 1.3504359613322865 1.0991830251715276 1.264844593783986 1.0763448619573794 0.9389611284518283 1.0 10.6679940247731 -5.786708156627326 24.5446969819464 1.1081301051145989 0.8850501046554822 0.317259244298858 0.13892578954610166 162.6720576656892 158010.8760757042 0.020591115444136155 0.06405907873713398 1.6341497181369581e-06 5.786708156627326 -0.2230800004591167 SALSSS(ph)LR ddPTM_A549_PD325901_60min_R1 1 SALSSSLR 8 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SALSS(0.008)S(0.992)LR 134.66 0.0010809 30102000.0 3463.5 3524.7 3520.7 3436.0 4233.3 2869.0 3339.5 3104.4 3697.0 4301.5 3798.3 True False 3815.1119703060613 3821.7388389357234 3759.635873688977 3648.2339162778158 3935.9676120921736 2845.635815213917 3466.5864999445193 3042.480306645313 3541.6279466638152 4029.9025559014167 3331.1331794075113 1.1452895350718557 1.1472789087392397 1.1286357137956522 1.0951930528717875 1.1815701745050735 0.8542545920424752 1.0406628355102574 0.9133469431523781 1.0631901385863363 1.209769270353277 1.0 11.701797319079596 -7.212614238794244 24.99994545850266 1.0107545468074512 1.1369450084550048 0.347201746037038 0.08598474811412089 250.3182904237835 128170.44235222253 0.00905892052731426 0.015690487122150293 6.128945523756696e-08 7.212614238794244 0.12619046164755354 SALSSS(ph)LRDLSEAGKR ddPTM_A549_PD325901_60min_R1 1 SALSSSLRDLSEAGKR 16 2 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SALS(0.055)S(0.446)S(0.499)LRDLSEAGKR 77.023 8.9286e-05 13392000.0 1751.1 1874.7 2094.1 1810.3 2103.3 2294.0 2364.0 2537.9 1983.9 2263.5 2486.1 True False 1928.8703829083133 2032.6875482602225 2236.218218846276 1922.118119510399 1955.571463991088 2275.3184245732746 2453.963313630435 2487.279593555965 1900.5235821980891 2120.5822237086722 2180.325460686364 0.8846708519842296 0.9322862962029232 1.0256350527330527 0.8815739458022559 0.8969172260069267 1.0435682496029777 1.1255032140283912 1.1407836299691572 0.8716696733889474 0.9725989362345544 1.0 11.090327789146832 -7.228652129774146 24.711967345297193 0.9767897346483667 0.9279303089075547 0.14649112927365504 0.08507904145445185 1586.521588827248 1195772.0333007365 0.015155728263190543 0.026249181982338998 5.9067402109480806e-08 7.228652129774146 -0.048859425740812035 SAMDSPVPASMFAPEPS(ph)SPGAAR ddPTM_A549_MK2206_60min_R1 3 SAMDSPVPASMFAPEPSSPGAAR 23 0 O00178;F8WAZ4 O00178 GTPBP1 GTP-binding protein 1 1 SAMDS(0.004)PVPAS(0.001)MFAPEPS(0.497)S(0.497)PGAAR;SAMDSPVPAS(0.002)MFAPEPS(0.499)S(0.499)PGAAR;SAMDSPVPASMFAPEPS(0.5)S(0.5)PGAAR 110.74 1.1275e-10 7940400.0 1718.29 2500.2000000000003 2295.2200000000003 1677.6899999999998 2904.59 2272.7299999999996 1792.1 1595.88 3082.7 3083.11 3099.36 True False 2008.2953438428685 2627.4495007823703 2620.716708964484 2088.7241253143666 2477.3286586871063 2513.228780083925 2117.701372681864 1822.100877177526 2384.4733720603417 2386.6333096871094 2329.7033740156126 0.8620390759795542 1.1278043076589381 1.1249143295213861 0.8965622613638233 1.0633665583000973 1.0787762974957524 0.9090004316865758 0.7821171130627015 1.023509429850859 1.0244365597382337 1.0 11.185930562254526 -7.739336471942917 24.99877568346548 0.983605417517856 1.030592521360682 0.0777810154401457 0.10348854937609006 695.6203270983192 786757.0470131104 0.016029202435609274 0.023764361840229984 1.8224831767456255e-08 7.739336471942917 0.046987103842825895 SAMDSPVPASMFAPEPS(ph)SPGAAR ddPTM_A549_PD325901_60min_R1 2 SAMDSPVPASMFAPEPSSPGAAR 23 0 O00178;F8WAZ4 O00178 GTPBP1 GTP-binding protein 1 1 SAMDSPVPASMFAPEPS(0.5)S(0.5)PGAAR;SAMDSPVPASMFAPEPS(0.638)S(0.361)PGAAR 131.98 1.6781999999999999e-22 13427700.0 5586.4 5620.1 5802.2 6185.9 6652.7 6864.0 6702.8 6071.8 7040.5 6418.700000000001 6727.5 True False 6153.527215509676 6093.725550742666 6195.972183462996 6567.988993801791 6185.437302569061 6808.101859751945 6957.878721912897 5950.693185765046 6744.612268998266 6013.4221865778045 5900.060149136206 1.042960081756214 1.0328243097038279 1.050154070780128 1.1132071246364112 1.0483685159505765 1.1539038056669102 1.1792894557069151 1.0085817831257624 1.1431429677857956 1.0192137087717987 1.0 12.526513947004055 -6.0215530724123 19.437630518715917 1.080002268467207 1.0387912869939018 0.09225633040297487 0.057728887415152946 96.86565987522611 87364.8474643308 0.009179077599739672 0.024711229027238896 9.515835539329337e-07 6.0215530724123 -0.041210981473305264 SAMDSPVPASMFAPEPSS(ph)PGAAR ddPTM_A549_PD325901_60min_R1 2 SAMDSPVPASMFAPEPSSPGAAR 23 0 O00178;F8WAZ4 O00178 GTPBP1 GTP-binding protein 1 1 SAMDSPVPASMFAPEPS(0.12)S(0.88)PGAAR;SAMDSPVPASMFAPEPS(0.006)S(0.994)PGAAR 224.4 1.5660999999999997e-87 12379300.0 2716.0 3076.7 3586.6000000000004 3297.1 3018.1 3066.9 2996.8 3747.3 3513.8 2957.3 3755.7000000000003 True False 2991.7263205864774 3335.9843066795893 3830.0082439778703 3500.7543787426034 2806.1190678797616 3041.9241832274543 3110.844863911883 3672.55716180002 3366.1272055686504 2770.575573304025 3293.772709343864 0.9082977438301881 1.0128155768659988 1.1628028349111033 1.0628403012787033 0.8519467842815283 0.9235379765574112 0.9444625171272303 1.1150001793935598 1.0219670580242315 0.8411556648837307 1.0 11.68552528829462 -4.613556213468722 0.12532467460064692 1.0120012979472377 0.9878229984914533 0.0 0.1008451449358745 775.7131419625182 12.457557059843008 0.37978834817643287 3.180480993223084 2.4346906422195856e-05 4.613556213468722 -0.024178299455784424 SAMPFTAS(ph)PASSTTAR ddPTM_A549_MK2206_60min_R1 5 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 S(0.006)AMPFT(0.071)AS(0.915)PAS(0.001)S(0.005)T(0.003)TAR;S(0.022)AMPFT(0.087)AS(0.535)PAS(0.054)S(0.196)T(0.074)T(0.033)AR;SAMPFT(0.062)AS(0.867)PAS(0.006)S(0.051)T(0.011)T(0.003)AR;SAMPFT(0.022)AS(0.96)PAS(0.012)S(0.001)T(0.002)T(0.003)AR;SAMPFT(0.005)AS(0.984)PAS(0.008)S(0.001)T(0.001)TAR 124.5 3.4803000000000004e-08 109489800.0 14748.52 17569.829999999998 15041.16 15027.000000000002 21612.2 16713.170000000002 16316.500000000002 16396.4 24720.9 24502.6 24266.499999999996 True False 17237.709609305428 18464.059300188426 17174.22266022787 18708.615674587676 18433.074009508233 18481.74655609565 19280.996845803034 18720.639911869053 19121.65562116537 18967.445642205246 18240.458328671037 0.94502612262821 1.0122585171648852 0.94154556594846 1.025665876234084 1.0105598048780624 1.0132281888468422 1.057045634401436 1.0263250832049131 1.0483100411522683 1.03985575912813 1.0 14.154854360159197 -6.282536117877143 24.05061746780241 1.0245573818877678 0.9708749158846627 0.5725638607351542 0.02340627551257883 302.17303871976355 344481.84909831337 0.0034808942392312485 0.008097785785703335 5.217517112220256e-07 6.282536117877143 -0.05368246600310511 SAMPFTAS(ph)PASSTTAR ddPTM_A549_PD325901_60min_R1 6 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 SAMPFT(0.053)AS(0.943)PASS(0.002)T(0.001)TAR;SAMPFT(0.004)AS(0.858)PAS(0.011)S(0.089)T(0.035)T(0.003)AR;SAMPFT(0.004)AS(0.832)PAS(0.021)S(0.128)T(0.011)T(0.003)AR;S(0.028)AMPFT(0.253)AS(0.631)PAS(0.012)S(0.045)T(0.013)T(0.018)AR;SAMPFTAS(1)PASSTTAR;SAMPFT(0.003)AS(0.997)PASSTTAR 315.08 7.007199999999997e-237 284184000.0 47859.9 51592.9 47352.0 47016.5 58434.6 53497.7 51294.5 51803.1 49693.8 53766.9 57069.8 True False 52718.60181540376 55940.814748298326 50565.59147070763 49920.60242278112 54330.355284426216 53062.03246830593 53246.54026692745 50769.84653175422 47605.34240084455 50372.04875808344 50050.57639526916 1.053306587302095 1.1176857246660183 1.0102898929948616 0.9974031473391718 1.0855090829595637 1.0601682595871447 1.0638546866357441 1.014370866197518 0.9511447385717672 1.0064229502628597 1.0 15.61109906315234 -8.494941533484434 4.0972655057411345 0.9769715306037405 1.0548215603961932 0.45217378890484095 0.03359064732257922 0.13274884512036492 4.997101782516456 0.005932288955752522 0.007026160172016958 3.1993257871426212e-09 8.494941533484434 0.0778500297924527 SAMPFTASPAS(ph)STTAR ddPTM_A549_MK2206_60min_R1 1 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 SAMPFT(0.003)AS(0.061)PAS(0.556)S(0.096)T(0.142)T(0.142)AR 79.81 0.00031456 4347000.0 1551.2 1608.4 1362.2 1200.1 2001.7 1648.4 1232.5 1430.5 2570.1 2564.5 2264.5 True False 1813.0046368011572 1690.2606899681496 1555.3804432478894 1494.1245538745354 1707.2525816359566 1822.8325938806365 1456.4292962615905 1633.277755722516 1987.9764536063467 1985.1776688773969 1702.1621529794388 1.06511863962414 0.9930080321722246 0.9137674930237257 0.8777803872910948 1.002990566232252 1.0708924474028387 0.8556348722195936 0.9595312367060045 1.1679124988924368 1.166268246184755 1.0 10.733152763610857 -8.728854397754349 24.704068259938293 1.0792920206438534 0.9643414375271459 0.38446838943242323 0.07828919363145914 164.29731347217128 124560.68292785693 0.014617955597651226 0.016574556864982888 1.867005521104566e-09 8.728854397754349 -0.11495058311670758 SAMPFTASPASS(ph)TTAR ddPTM_A549_MK2206_60min_R1 1 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 S(0.002)AMPFT(0.01)AS(0.244)PAS(0.067)S(0.396)T(0.201)T(0.081)AR 54.261 0.0050692 5491700.0 3071.7 2979.4 2779.4 3480.7 4470.0 4145.0 2833.4 3235.4 5119.0 4727.4 5240.6 True False 3590.1278641452486 3131.0387339536833 3173.560713524579 4333.47165625456 3812.4689213731936 4583.62114877168 3348.192103876344 3694.027857996944 3959.55467336325 3659.47705667811 3939.2143867979903 0.9113816897545152 0.7948383678855223 0.8056329008546863 1.100085253236761 0.9678246845742705 1.163587634157048 0.8499644282112653 0.9377575057547586 1.0051635388602937 0.9289865179571335 1.0 11.943692220617255 -6.245615094204653 24.885949718243758 1.0012452947268093 0.8330397076909922 0.4064967160412919 0.0840692878596025 495.2711493141853 778883.2930499434 0.010456446626321145 0.02755904967860363 5.680478308690098e-07 6.245615094204653 -0.16820558703581712 SANTS(ph)PESSSR ddPTM_A549_PD325901_60min_R1 1 SANTSPESSSR 11 0 P20749;H7C0A2 P20749 BCL3 B-cell lymphoma 3 protein 1 S(0.01)ANT(0.432)S(0.548)PES(0.005)S(0.005)S(0.001)R 47.187 0.032643 50521000.0 518.27 393.67 470.62 523.32 398.75 341.62 307.36 267.68 422.63 443.83 559.42 True False 570.8843888697913 426.8459524849851 502.5591032679596 555.6442878540473 370.7431756128207 338.8379599837499 319.0567529938454 262.3409124091024 404.86833083541427 415.80649805549854 490.6148864555594 1.1636100017146604 0.8700224234301733 1.024345402355585 1.1325467351149738 0.7556704573137798 0.6906393779277269 0.6503201631301215 0.5347186146437194 0.8252263476152957 0.8475211607611155 1.0 8.938447199230334 -6.764308938872281 24.999700628361726 0.8389191963425491 1.033281538622395 0.4135097527989826 0.14672358591796653 92.6902855055109 807531.2364144705 0.026045731246143327 0.05080597351162405 1.7206441454835112e-07 6.764308938872281 0.19436234227984595 SAPALPVSEDFKSEPVS(ph)PQDFSFSK ddPTM_A549_PD325901_60min_R1 1 SAPALPVSEDFKSEPVSPQDFSFSK 25 1 P48552 P48552 NRIP1 Nuclear receptor-interacting protein 1 1 SAPALPVS(0.001)EDFKS(0.014)EPVS(0.959)PQDFS(0.02)FS(0.005)K 78.311 1.31e-06 2992400.0 1454.1 1209.6 1268.0 1203.4 1611.3 1536.7 1770.3 1352.1 1844.8 1831.7 1995.5 True False 1601.719161548157 1311.537237091569 1354.0541051034231 1277.7312848803047 1498.1278466832316 1524.1856246912616 1837.6697352453311 1325.1313047980693 1767.26947146481 1716.0461494001229 1750.0661505167284 0.9152334962168315 0.7494215214118173 0.7737159562246387 0.7301045646206225 0.8560406966564613 0.8709302926870662 1.050057299092801 0.757189266478189 1.0098300975326002 0.9805607341719279 1.0 10.773193739987546 -7.846431560149304 0.6563522508663806 1.0053379334247303 0.7851528723284278 0.3921972829454895 0.08734371294998282 0.40770152099046997 0.3581094427988373 0.018916330048048317 0.0346534603536435 1.4241916653050242e-08 7.846431560149304 -0.22018506109630254 SAPAMQSSGS(ph)FNYARPK ddPTM_A549_MK2206_60min_R1 1 SAPAMQSSGSFNYARPK 17 1 Q8WX93-4;Q8WX93-3;Q8WX93;A0A3B3ISX8 Q8WX93-4 PALLD Palladin 1 SAPAMQS(0.141)S(0.141)GS(0.707)FNY(0.011)ARPK 43.12 0.015488 2986300.0 1150.4 1792.7 1453.1 1584.9 2188.5 1452.7 1614.4 1342.1 2212.8 1881.1 2137.1 True False 1344.559395420352 1883.9407727592018 1659.1714301009451 1973.2005711488648 1866.5745490884199 1606.4237497757836 1907.71558286792 1532.3467850088714 1711.60433311549 1456.1582035193105 1606.3990890405641 0.837002090323272 1.1727725604503436 1.0328513265603878 1.2283377054996814 1.161961907114407 1.0000153515620045 1.1875726249367582 0.953901677026024 1.065491349436559 0.9064734993027254 1.0 10.649614640937767 -9.569079609972363 0.5351116283522441 1.0052975316559432 1.0880079862306875 0.10572553750100055 0.11372023429061576 1.6850085139116115 1.0668884270077696 0.05759025379103518 0.029030482886262025 2.697244958562613e-10 9.569079609972363 0.08271045457474435 SAPAMQSSGS(ph)FNYARPK ddPTM_A549_PD325901_60min_R1 1 SAPAMQSSGSFNYARPK 17 1 Q8WX93-4;Q8WX93-3;Q8WX93;A0A3B3ISX8 Q8WX93-4 PALLD Palladin 1 SAPAMQS(0.037)S(0.287)GS(0.675)FNYARPK 49.089 0.0048722 5165900.0 1967.4 1867.1 1670.7 1911.6 2332.3 2120.6 1831.5 2090.8 2010.6 1797.7 2193.3 True False 2167.128999676668 2024.4470695880207 1784.0837487352437 2029.6751904414068 2168.4872939982 2103.33053668269 1901.1987347352558 2049.09735379913 1926.1014740498413 1684.192915202598 1923.5380044742367 1.1266369547343633 1.0524601358949315 0.9275011695039994 1.0551781070715995 1.1273430984748938 1.093469706234162 0.9883863642480581 1.0652752111124586 1.0013326846517416 0.8755703871122321 1.0 10.909546618754565 -8.634702527848628 1.3011492702679333 0.9995395659709794 1.0548561961572267 0.2305789671796853 0.06638694002553336 0.5788188049137761 1.9106030042412387 0.011185174220123691 0.012544620160205286 2.3189825046273544e-09 8.634702527848628 0.05531663018624733 SAPAS(ph)PT(ph)HPGLMSPR ddPTM_A549_MK2206_60min_R1 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.022)APAS(0.978)PT(0.971)HPGLMS(0.03)PR;S(0.034)APAS(0.963)PT(0.958)HPGLMS(0.045)PR 65.23100000000001 0.0054556000000000006 12398900.0 1949.71 2023.19 2219.98 1995.3200000000002 2451.9 2283.8999999999996 2004.13 2461.0 3141.2 3085.0 3356.9 True False 2278.773382167086 2126.161729256814 2534.8065455890833 2484.17348957332 2091.2287580122907 2525.5807820698774 2368.2544791210894 2809.854286496411 2429.7232154656435 2388.09635737445 2523.2890842732068 0.9030964372532251 0.8426151971680331 1.0045644636548625 0.9844981714763952 0.8287709763602595 1.000908218487907 0.9385585242220581 1.1135681218649367 0.9629190847015004 0.94642202205789 1.0 11.301089784894602 -7.3802678064744445 23.116907044129878 0.9904964054639822 0.9175876569251807 0.2758934607872279 0.06502306750525332 11.185121055554266 2139.1887817923284 0.009281910492118918 0.01483815014237527 4.166124013757644e-08 7.3802678064744445 -0.07290874853880147 SAPAS(ph)PT(ph)HPGLMSPR ddPTM_A549_PD325901_60min_R1 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.173)APAS(0.948)PT(0.594)HPGLMS(0.285)PR;S(0.148)APAS(0.635)PT(0.705)HPGLMS(0.512)PR 69.975 0.0029254000000000003 21360900.0 5050.2 4573.9 4452.4 4910.2 4959.0 4554.3 4888.0 5166.4 4683.9 4972.0 5848.4 True False 5562.892586239256 4959.358605103448 4754.5666384562155 5213.491902126698 4610.696947621264 4517.211290773353 5074.015514816235 5063.3520990376055 4487.05197170101 4658.06707147317 5129.083876062161 1.084578205515748 0.9669092424573452 0.9269816507868301 1.0164567451233302 0.8989318675679591 0.880705287713374 0.9892635093173394 0.9871844994909654 0.8748252280767791 0.9081674591466005 1.0 12.324485448605413 -5.269411404753093 3.174472013596403 0.943611346822244 1.1041131983037968 0.42444673549913126 0.04739839872434857 0.28584690085169223 4.478776108814395 0.007485137373749453 0.11220773239280582 5.37760123974282e-06 5.269411404753093 0.16050185148155283 SAPAS(ph)PTHPGLMSPR ddPTM_A549_PD325901_60min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 S(0.164)APAS(0.806)PT(0.03)HPGLMSPR 67.449 0.0009175 7898100.0 1449.6 1175.6 1086.0 1361.9 1529.5 1512.4 1445.3 1436.5 1325.3 1467.6 1819.4 True False 1596.7623248608822 1274.671937768559 1159.7024906485153 1446.0214699006867 1422.0731964885513 1500.0835158346213 1500.301682398507 1407.8478805875511 1269.6022498548964 1374.9354855378162 1595.6253341268543 1.000712567486684 0.7988541611280414 0.7268012520515154 0.9062412328091841 0.8912325256271562 0.9401226489396931 0.940259376879028 0.8823173275560598 0.7956769190742626 0.8616906839788914 1.0 10.639906219397485 -11.026054461025085 1.3187471372315867 0.9999411262185601 0.8656696823283593 0.0 0.08419210461033447 0.4636732594721706 1.4376405029877326 0.055221289360828596 0.012465097973860627 9.417714898949433e-12 11.026054461025085 -0.13427144389020085 SAPAS(ph)PVQSPAK ddPTM_A549_MK2206_60min_R1 1 SAPASPVQSPAK 12 0 P35612 P35612 ADD2 Beta-adducin 1 SAPAS(1)PVQSPAK 119.88 1.6357e-05 3308900.0 2036.8 2548.1 2480.1 2170.9 2720.3 2000.6 2210.1 1937.6 3082.2 4318.8 3677.4 True False 2380.5620450210126 2677.7874061849298 2831.8154729842076 2702.770597455404 2320.147473559621 2212.3021641091987 2611.6465620022236 2212.260733651134 2384.0866212620035 3343.1800804631343 2764.2000889232 0.8612119124662808 0.9687386296366366 1.0244611033520903 0.9777767565691217 0.839355834932861 0.8003408193836669 0.9448109680871895 0.8003258311567905 0.8624869924632445 1.209456614179286 1.0 11.432646334848922 -5.218255565605173 21.130982484337895 0.9215510415066246 0.8612104432490612 0.010515961386461603 0.11488945196959577 10376.80962348039 5076815.851853798 0.011637499052113273 4.507687802671221 6.049847597130928e-06 5.218255565605173 -0.06034059825756344 SAPASPT(ph)HPGLMS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.008)APAS(0.363)PT(0.63)HPGLMS(0.999)PR;S(0.003)APAS(0.434)PT(0.564)HPGLMS(0.998)PR 57.989 0.00265 25676000.0 2870.2 3180.5 2930.1000000000004 2977.8999999999996 4301.799999999999 3306.7 3192.4 3428.5 4765.8 4981.700000000001 5536.1 True False 3354.6195903472667 3342.3738649861352 3345.6322395834964 3707.4856336830085 3669.010918560002 3656.612799190184 3772.417756905072 3914.5003743408947 3686.3539094187477 3856.3305100590906 4161.33358141288 0.8061405135438064 0.8031977729243501 0.8039807850366006 0.8909368982681319 0.8816911326090513 0.8787117705542533 0.9065405796245344 0.9406841094944906 0.8858587847617674 0.9267054502152569 1.0 12.022830227204892 -2.0000000000138964 0.03246610825084484 1.4550674723226629 1.1238535179916488e-07 0.7370050622043407 0.030173489049144783 266.960210693025 0.6454196574994903 8.790903740653635 23.49121038347393 0.009999999999680022 2.0000000000138964 -1.4550673599373112 SAPASPT(ph)HPGLMS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.008)APAS(0.428)PT(0.568)HPGLMS(0.996)PR;S(0.011)APAS(0.34)PT(0.65)HPGLMS(0.999)PR 57.482 0.0029165 43230000.0 5006.7 5013.3 5028.3 5079.6 5709.1 5039.5 4839.1 5081.3 5406.3 6373.799999999999 5872.700000000001 True False 5514.976498262264 5435.788385177881 5369.550675624242 5393.355355391388 5308.11251132578 4998.459982840902 5023.254598557125 4979.949485297264 5179.092011914679 5971.3571802404895 5150.3951301125535 1.0707870675820834 1.0554119145920928 1.0425512101450942 1.047173123448011 1.0306223847353204 0.9705002930001739 0.9753144121288709 0.9669062973792528 1.005571782567583 1.1593978771314184 1.0 12.3304674024699 -7.012304590137362 3.7288363277820866 0.9954395134370174 1.052720232580909 0.06803383040232025 0.05166977967586033 0.0963068660295652 2.9248433734542956 0.002590893022240867 0.004857755152562913 9.72065231841305e-08 7.012304590137362 0.057280719143891656 SAPATGGVK ddPTM_A549_PD325901_60min_R1 2 SAPATGGVK 9 0 P68431;Q71DI3;Q16695;Q5TEC6 P68431;Q5TEC6 HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3.1;Histone H3.2;Histone H3.1t;Histone H3 0 ; 105.52 0.0015647 7951900.0 5030.799999999999 5415.700000000001 5441.2 5726.799999999999 6942.0 6472.200000000001 5881.1 6076.7 5840.5 6981.4 6591.4 False True 5541.523112520779 5872.100045400806 5810.472552593644 6080.531429493541 6454.4178685998795 6419.492549051075 6104.908478761406 5955.495451421069 5595.044095885854 6540.593212546821 5780.699586327217 0.9586249950832683 1.0158113144799592 1.0051504088427026 1.0518677434605839 1.1165461502040641 1.11050443863832 1.0560847156287143 1.0302378392932385 0.9678835601696923 1.1314535749300898 1.0 12.497028384420885 -8.616590898056783 4.861816299579676 0.9849524020849674 1.0475577468846178 0.0 0.061452434898770704 0.21063577903446015 8.544651145976939 0.007999528182371611 0.00908320633143572 2.417737251329132e-09 8.616590898056783 0.06260534479965041 SAPGST(ph)PVR ddPTM_A549_MK2206_60min_R1 2 SAPGSTPVR 9 0 A0A087WW42;A0A087WX51;F5H1D6;Q07864 A0A087WW42 POLE DNA polymerase;DNA polymerase epsilon catalytic subunit A 1 S(0.002)APGS(0.048)T(0.95)PVR;S(0.007)APGS(0.028)T(0.966)PVR 70.908 0.0035429000000000003 43400000.0 5464.4 5873.4 5308.1 4529.0 7329.3 5614.4 4541.5 5194.9 7732.799999999999 7818.1 8400.6 True False 6386.65712824667 6172.330972680253 6060.8683973015095 5638.605203314535 6251.169679065001 6208.512081462901 5366.631763871818 5931.292983714021 5981.333146744156 6051.985780093736 6314.499175234746 1.0114273438018528 0.9774854349317089 0.9598335876061291 0.8929615867920223 0.9899707808311828 0.9832152810807985 0.8498903262066402 0.9393132882139494 0.9472379330102288 0.9584268858295875 1.0 12.62445259807984 -10.519838547886886 0.964519402127669 0.9982431562080264 0.9489266241799363 0.031480000362924754 0.04497148787914689 0.7816441919138176 1.363725422385098 0.02437884349133574 0.007941864782579727 3.0210746179946863e-11 10.519838547886886 -0.049316532028090054 SAPGST(ph)PVR ddPTM_A549_PD325901_60min_R1 2 SAPGSTPVR 9 0 A0A087WW42;A0A087WX51;F5H1D6;Q07864 A0A087WW42 POLE DNA polymerase;DNA polymerase epsilon catalytic subunit A 1 SAPGS(0.035)T(0.965)PVR;SAPGS(0.041)T(0.958)PVR 56.013000000000005 0.01745 89297000.0 7534.200000000001 7623.099999999999 7890.5 7322.200000000001 9520.2 7568.9 8023.3 8381.3 8202.5 8238.6 9190.2 True False 8299.06643761511 8265.525390271774 8425.996779431041 7774.475664077251 8851.533994907031 7507.261387860797 8328.631072018221 8214.128396497348 7857.777449962114 7718.413389991731 8059.863661477742 1.0296782658099592 1.0255167751505518 1.0454267135687714 0.9645914609245181 1.0982237872351477 0.9314377641078325 1.0333463966425458 1.0191398690472788 0.9749268449190396 0.9576357261329396 1.0 12.976539719373946 -7.404036912360932 0.716147549245658 0.9897913582887442 1.0292689352922708 0.14099634330051958 0.04193486598676901 1.028405256836801 1.0386590597493361 0.0073938962990041665 0.018163363073785445 3.944237770544443e-08 7.404036912360932 0.03947757700352661 SAPGST(ph)PVRR ddPTM_A549_PD325901_60min_R1 1 SAPGSTPVRR 10 1 A0A087WW42;A0A087WX51;F5H1D6;Q07864 A0A087WW42 POLE DNA polymerase;DNA polymerase epsilon catalytic subunit A 1 SAPGS(0.006)T(0.994)PVRR 78.548 0.00081713 21540000.0 2368.1 2512.7 2503.2 2686.1 3231.5 2639.9 2644.1 2855.4 3053.4 3058.5 3107.6 True False 2608.507768696921 2724.454047321417 2673.082204964424 2852.014296424284 3004.5305880697947 2618.401529656057 2744.7226724070383 2798.446806982034 2925.0762164845246 2865.385788033124 2725.3849006994656 0.9571153667239632 0.9996584506732206 0.9808090608700377 1.0464629402226155 1.1024243171299168 0.9607455919287028 1.0070954277697106 1.0268079221631474 1.0732708674410754 1.0513692166188076 1.0 11.41224427789732 -6.251735505922534 23.08588620073492 1.0329742403989843 0.9812406922733717 0.30126637272423473 0.036805259499425015 271.9041024195686 646863.6852380089 0.00562880519409709 0.014664329992533446 5.600986089663856e-07 6.251735505922534 -0.051733548125612594 SAPGT(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SAPGTSPR 8 0 Q03111 Q03111 MLLT1 Protein ENL 1 S(0.009)APGT(0.495)S(0.495)PR 57.59 0.017357 156520000.0 2683.2 2668.7 2909.4 1723.8 2771.3 2127.2 1787.7 1995.7 2797.5 3888.8 4383.3 True False 3136.0585620583156 2804.5254310606806 3321.996668319929 2146.1310773843215 2363.645441118913 2352.298892078918 2112.501949636387 2278.596586574922 2163.8707166895274 3010.317379111104 3294.805637074311 0.9518189864586495 0.8511960157841102 1.008252696589946 0.6513680361704194 0.7173853943074346 0.7139416254512935 0.6411613255318531 0.691572383188663 0.656752159320384 0.9136555265166342 1.0 11.685977646799952 -6.248540416541026 24.905297813328488 0.7827122461159354 0.928499903914406 0.3155328933679691 0.11587520265973174 1129.9445647419352 2181690.608919981 0.021547854611248803 0.0566165274871986 5.642344298210526e-07 6.248540416541026 0.14578765779847058 SAPGT(ph)SPR ddPTM_A549_PD325901_60min_R1 2 SAPGTSPR 8 0 Q03111 Q03111 MLLT1 Protein ENL 1 S(0.001)APGT(0.833)S(0.166)PR;S(0.001)APGT(0.5)S(0.5)PR 67.89699999999999 0.0082582 60685400.0 5127.01 4738.29 4643.58 4958.52 5676.53 5011.98 4317.99 5114.4 5348.049999999999 5984.04 5885.83 True False 5647.500280894726 5137.6023273302 4958.721262914946 5264.7965187840155 5277.830115765386 4971.164096596672 4482.313472344793 5012.389279830818 5123.290056844851 5606.206693157346 5161.9102233504755 1.0940717750858258 0.9952909107348833 0.9606368666552197 1.019931825812879 1.0224567819662058 0.9630473761649433 0.8683439421453998 0.971033796201398 0.992518241341951 1.086072103268485 1.0 12.333689334762438 -5.2678220004667 4.451939568497433 0.9852368409099336 1.1009715165063565 0.2682094549103232 0.050451399058398606 0.163531719088491 8.006839780897142 0.005765896994777063 0.058729108613310314 5.397317911590628e-06 5.2678220004667 0.11573467559642292 SAPGTS(ph)PR ddPTM_A549_MK2206_60min_R1 3 SAPGTSPR 8 0 Q03111 Q03111 MLLT1 Protein ENL 1 S(0.001)APGT(0.03)S(0.97)PR;SAPGT(0.016)S(0.983)PR;S(0.001)APGT(0.315)S(0.684)PR 72.87899999999999 0.0054476 347784000.0 10629.0 12465.7 10658.800000000001 8832.02 13514.2 10547.32 10306.099999999999 11044.2 13313.400000000001 16025.5 15290.9 True False 12422.915345899615 13100.15088469034 12170.378115174417 10995.86529648445 11526.279082152492 11663.430401655614 12178.584965680788 12609.74917144398 10297.93615713113 12405.328419806878 11493.747522628975 1.080841154848868 1.1397632372643183 1.058869449778089 0.9566823418415715 1.0028303701172718 1.0147630595410737 1.0595834771647368 1.0970964123422593 0.8959598370206476 1.0793110250058282 1.0 13.488561643227117 -5.005791760154894 0.3287079257444688 0.959741203322666 1.2657026303599093 0.0 0.06800292335819658 6.736962713288741 0.44309059813475987 0.022417083972006292 0.8465977443059973 9.8675251014158e-06 5.005791760154894 0.30596142703724327 SAPGTS(ph)PR ddPTM_A549_PD325901_60min_R1 3 SAPGTSPR 8 0 Q03111 Q03111 MLLT1 Protein ENL 1 SAPGT(0.003)S(0.996)PR;SAPGT(0.027)S(0.973)PR;SAPGT(0.006)S(0.994)PR 83.62299999999999 0.0033155999999999997 588946000.0 13452.3 13437.2 12563.4 12631.8 14597.699999999999 13484.599999999999 11869.400000000001 13220.4 14001.4 14923.599999999999 15958.6 True False 14817.96759294016 14569.600001857501 13416.027873861465 13412.037597100734 13572.4079113311 13374.785888404882 12321.096512184897 12956.70875079683 13412.969849180063 13981.321349122489 13995.793369900417 1.0587443813516084 1.0409985069650372 0.9585757319563031 0.958290626521029 0.9697490919321617 0.9556289904342912 0.8803428420630194 0.9257573621129432 0.9583572359696462 0.998965973532515 1.0 13.772705649838555 -5.712937307996665 5.004607172254136 0.9647032011052314 1.0533660243411032 0.5478863019291986 0.032149211891233966 0.13180130255948982 7.076436129377758 0.005106888701724204 0.02040812508896055 1.936701513744817e-06 5.712937307996665 0.08866282323587171 SAPS(ph)EGDEWDR ddPTM_A549_MK2206_60min_R1 2 SAPSEGDEWDR 11 0 Q9BSQ5-3;Q9BSQ5;C9JUH3;A0A0A0MT72;Q9BSQ5-4;Q9BSQ5-2 Q9BSQ5-3 CCM2 Cerebral cavernous malformations 2 protein 1 S(0.012)APS(0.988)EGDEWDR;S(0.192)APS(0.808)EGDEWDR 79.82 0.00092948 2938600.0 1856.67 1285.4 995.1300000000001 1306.94 1909.37 1637.75 1353.45 1396.67 2107.8 2185.31 2601.5 True False 2170.030504776692 1350.8213696126952 1136.254397657665 1627.1403586707665 1628.5042023271449 1811.0556179495345 1599.354345659433 1594.6522496224868 1630.3866654649446 1691.6469532362898 1955.4757522525992 1.1097199759582483 0.6907891177155351 0.581062892929643 0.8320943672128849 0.8327918157262746 0.926145781078236 0.8178850306975506 0.8154804516422851 0.8337544782065591 0.8650820401570343 1.0 10.933303931537438 -11.03495706846425 0.36471216901278947 1.08764922963041 0.8035127953344722 0.03944700737990747 0.13101668726011834 3.8167790246374875 0.5393435965616535 0.43671501928560263 0.04222163989765373 9.226626310903133e-12 11.03495706846425 -0.28413643429593793 SAPS(ph)EGDEWDR ddPTM_A549_PD325901_60min_R1 2 SAPSEGDEWDR 11 0 Q9BSQ5-3;Q9BSQ5;C9JUH3;A0A0A0MT72;Q9BSQ5-4;Q9BSQ5-2 Q9BSQ5-3 CCM2 Cerebral cavernous malformations 2 protein 1 SAPS(1)EGDEWDR;S(0.003)APS(0.997)EGDEWDR 110.66 7.9453e-05 3810300.0 2544.2 1958.4299999999998 1421.1100000000001 1939.56 1751.4900000000002 2311.2 1617.88 1723.23 2129.89 2420.3 2437.8 True False 2802.48531105895 2123.473769210683 1517.555070428648 2059.3622161396393 1628.471384712477 2292.3783534759177 1679.449308737906 1688.8588258022176 2040.3781301919894 2267.4818449490185 2137.966054487437 1.3108184319282035 0.9932214614697292 0.7098125188860736 0.9632342907489977 0.7616918806051353 1.0722239245400462 0.7855360028812725 0.7899371565125762 0.9543547830936709 1.060578974202952 1.0 11.062023231541156 -4.115554268352284 15.77963910450807 0.9472569166771471 0.9328375505002695 0.0 0.16721059968195923 0.0 0.0 0.020197325133819954 0.0 7.663827689049757e-05 4.115554268352284 -0.014419366176877557 SAPS(ph)GPVR ddPTM_A549_PD325901_60min_R1 1 SAPSGPVR 8 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 S(0.056)APS(0.944)GPVR 55.461000000000006 0.020818 13108000.0 5411.0 5764.0 5679.1 5478.0 6600.0 6581.5 6164.2 7018.2 6715.4 7135.0 6733.0 True False 5960.320736632337 6249.752508759762 6064.517877202562 5816.363618559336 6136.438768763931 6527.902446089373 6398.782004179671 6878.216495328608 6433.175091432562 6684.494882333285 5904.883684003577 1.009388339482273 1.058403999674107 1.0270342654896718 0.9850090077669026 1.0392141652828217 1.1055090659573132 1.083642345320717 1.1648352217270266 1.089466860940908 1.1320282058123663 1.0 12.527692925967166 -7.004200050713049 24.75785985332997 1.061311284246924 1.0218230163842352 0.22137546377826034 0.04823921148812267 313.0498262731738 1845345.929312502 0.008006185096318097 0.014881518668759652 9.903756393219774e-08 7.004200050713049 -0.039488267862688664 SAPS(ph)SPAPR ddPTM_A549_MK2206_60min_R1 1 SAPSSPAPR 9 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 S(0.035)APS(0.726)S(0.24)PAPR 60.828 0.007909000000000001 20488000.0 1178.4 1196.3 1334.1 1177.9 1939.0 1136.0 1053.4 1150.0 1382.9 2083.1 2116.6 True False 1377.2851108860766 1257.1865601895645 1523.2954407113543 1466.4855528779406 1653.7756685777683 1256.2107659842288 1244.7891445695411 1313.0160217272942 1069.6753580375148 1612.5262632242182 1590.9898048117823 0.8656781499923015 0.7901914621874604 0.9574514155303236 0.9217441547662395 1.039463397927565 0.7895781369465416 0.7823991962769381 0.8252824862586892 0.6723332574491637 1.0135365156629548 1.0 10.635708875457 SAPS(ph)SPAPR ddPTM_A549_PD325901_60min_R1 1 SAPSSPAPR 9 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 S(0.035)APS(0.483)S(0.483)PAPR 69.27600000000001 0.0040828 15830000.0 1518.1 1595.0 2075.8 1681.5 1973.3 1745.5 1741.7 1592.8 1938.3 1794.4 1868.7 True False 1672.2163944338477 1729.416247652986 2216.6762707994353 1785.362436036424 1834.702215515434 1731.28522671868 1807.981346594811 1561.0303544725725 1856.8399916198184 1681.10127776578 1638.8617466653027 1.0203523255310667 1.0552545089126282 1.3525706334349734 1.0893917315900599 1.11949785834505 1.056394921805599 1.1031933293175136 0.9525088724835401 1.1330058776452925 1.0257737000612923 1.0 10.678478439396489 -7.120975198497643 2.016486676773021 1.0574251744837477 1.1393654166669467 0.15854161010071377 0.09153965135383227 0.5352487671532333 4.266133410415165 0.014535112955846296 0.02829382813787045 7.568761171423544e-08 7.120975198497643 0.08194024218319895 SAPSS(ph)PAPR ddPTM_A549_MK2206_60min_R1 1 SAPSSPAPR 9 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 SAPS(0.155)S(0.845)PAPR 93.098 0.00098619 17359000.0 1448.4 1557.6 1170.4 977.05 1867.6 1371.9 1285.2 1258.8 1694.8 2238.6 2343.0 True False 1692.8545100198514 1636.8751869524913 1336.380319172904 1216.4272938614406 1592.8785139947604 1517.073547406482 1518.7042041017412 1437.238754913319 1310.9305060394677 1732.8987052247787 1761.168436489656 0.961211020448466 0.9294256886723994 0.7588032419185097 0.69069333100587 0.9044441638811507 0.8614017353333328 0.862327630132191 0.8160711520460868 0.7443527142993783 0.9839483091570593 1.0 10.782317178423881 -10.991853170456986 1.2739107848118176 0.9997791163125607 0.826183834364871 0.3632771124309878 0.07831837531019174 0.39525082513796633 1.1438147163904195 0.05903525022790032 0.013581723962167775 1.0189358193079684e-11 10.991853170456986 -0.1735952819476897 SAPSS(ph)PAPR ddPTM_A549_PD325901_60min_R1 2 SAPSSPAPR 9 0 E9PAK5;O75064 E9PAK5 DENND4B DENN domain-containing protein 4B 1 SAPS(0.026)S(0.974)PAPR;SAPS(0.037)S(0.963)PAPR 106.2 0.00053684 26316000.0 5855.9 5558.2 5285.1 5968.0 5578.799999999999 5858.1 5880.0 6582.7 6104.5 6703.1 7721.3 True False 6450.386657114264 6026.609020504596 5643.778667888091 6336.629805688593 5186.964333815186 5810.393575846863 6103.766617659462 6451.402884471751 5847.949093970583 6279.865122041797 6771.629049353454 0.9525605449002169 0.8899792024313571 0.8334447481920102 0.9357615072393259 0.7659847129857815 0.8580495968546344 0.9013734469466016 0.9527106162272315 0.8635956062195901 0.9273787852631104 1.0 12.725287229053908 -11.027927089105157 0.5829412577730058 1.0320821034589014 0.8781903572750928 0.18491117966198378 0.05652121294343137 1.1979328461282839 0.4767962531593377 0.10452334498845962 0.010948279548870106 9.377194213674578e-12 11.027927089105157 -0.15389174618380863 SAPT(ph)SPTATNISSK ddPTM_A549_MK2206_60min_R1 1 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SAPT(0.5)S(0.5)PT(0.001)ATNISSK 131.53 9.1602e-09 6902500.0 2690.4 3441.7 3713.2 2988.0 3568.3 2602.1 2301.9 3056.4 4169.6 3993.2 4412.6 True False 3144.4737460352176 3616.867829310728 4239.787594969943 3720.060134136418 3043.407796898428 2877.4524948658113 2720.125433723777 3489.6540598324373 3225.1922574829864 3091.133346602156 3316.8296384354503 0.9480359526449682 1.0904593312235373 1.2782651076917693 1.1215710602161562 0.9175653044194348 0.8675309884842644 0.8200980243914068 1.0521053054381497 0.9723719964720017 0.9319542103646435 1.0 11.695589197874488 -6.750524136303542 24.86041275066328 0.9656601763868514 1.1202656777829174 0.41349275555003895 0.09461930873123664 172.32820668771834 392489.42281902453 0.01387102533210305 0.02865188002997074 1.7761345552819024e-07 6.750524136303542 0.154605501396066 SAPTAPT(ph)PPPPPPPATPR ddPTM_A549_MK2206_60min_R1 2 SAPTAPTPPPPPPPATPR 18 0 A6NHN7;A6NHB5;Q14202-2;Q14202 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 S(0.006)APT(0.006)APT(0.988)PPPPPPPATPR;S(0.001)APT(0.029)APT(0.97)PPPPPPPATPR 130.21 1.7766e-12 12854600.0 1622.92 2133.63 1771.96 1833.21 2742.7 2032.02 2041.69 1917.0 3428.3 2737.6 3162.8 True False 1896.8292194155065 2242.2226535294335 2023.250572762832 2282.346532295925 2339.2524632327195 2247.04700765429 2412.638644936574 2188.740620566282 2651.7955238701356 2119.1742586542277 2377.3894711606854 0.7978622108095059 0.943144857302131 0.8510387537701358 0.9600221419259678 0.9839584517427232 0.9451741226721427 1.0148268401974034 0.9206487397698865 1.1154232640626107 0.8913870799720535 1.0 11.215162553985543 -6.469551360873239 0.46720361918516873 1.048730640445813 0.8091077820923467 0.20454561158191553 0.07243869879931018 1.0581367017387082 0.29852057943014937 0.014860426994615214 0.11544559740098663 3.3919437309945855e-07 6.469551360873239 -0.2396228583534663 SAPTAPT(ph)PPPPPPPATPR ddPTM_A549_PD325901_60min_R1 2 SAPTAPTPPPPPPPATPR 18 0 A6NHN7;A6NHB5;Q14202-2;Q14202 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 SAPT(0.027)APT(0.973)PPPPPPPATPR;SAPT(0.03)APT(0.97)PPPPPPPATPR 165.58 2.5398000000000006e-23 22648000.0 5687.6 5449.6 5969.5 5866.1 5202.1 6245.200000000001 6614.9 6302.2 5429.4 5606.6 7020.799999999999 True False 6265.000965010175 5908.856917372867 6374.626167519627 6228.435674120283 4836.722442270738 6194.341161789461 6866.633639312172 6176.497677019745 5201.221199247097 5252.598319171655 6157.2861085180875 1.017493885226979 0.9596528102207985 1.035298028249957 1.011555345057584 0.7855282923396297 1.0060180820930362 1.115204575245052 1.0031201357486184 0.8447262491264852 0.8530703668138999 1.0 12.588078891992105 SAPTAPTPPPPPPPAT(ph)PR ddPTM_A549_MK2206_60min_R1 2 SAPTAPTPPPPPPPATPR 18 0 A6NHN7;A6NHB5;Q14202-2;Q14202 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 SAPTAPT(0.332)PPPPPPPAT(0.668)PR;SAPTAPT(0.013)PPPPPPPAT(0.986)PR 117.65 4.670599999999999e-10 4153900.0 1628.7 1529.8 2025.0 1724.3 1995.6 1635.1 1689.4 1646.0 2774.5 2393.9 2384.8 True False 1903.584742108073 1607.6602856958925 2312.175449696795 2146.7535774067683 1702.0498835553353 1808.1251967084634 1996.342112052195 1879.3255406635885 2146.0801799660735 1853.116327364244 1792.5883428683455 1.0619196257084438 0.8968374094876981 1.2898529988190435 1.197571983521726 0.9494928884965645 1.008667273722899 1.1136645621926897 1.0483865680262394 1.19719632703407 1.0337656912345234 1.0 10.807828504664553 SAPTS(ph)PTATNISSK ddPTM_A549_MK2206_60min_R1 1 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SAPT(0.066)S(0.934)PTATNISSK 188.4 2.8231e-26 6248000.0 3184.2 3360.3 3215.6 2801.8 4155.0 2633.2 2687.4 2664.4 4192.8 4728.6 4302.1 True False 3721.615113784322 3531.324916998239 3671.620432614823 3488.241125777583 3543.805004095217 2911.8434762233046 3175.6657937309537 3042.086859382784 3243.1374945257744 3660.405975844675 3233.769838080303 1.1508596159068711 1.0920149218456985 1.1353994305279456 1.0786918365990896 1.0958742215862103 0.9004485854045484 0.982032102697871 0.9407246067916479 1.0028968222583932 1.1319315100105085 1.0 11.659001284043626 -7.11141279161429 7.579935950156931 0.9884786773419386 1.1108830324134629 0.5219730238665121 0.05608298657041695 0.10833327387611152 6.631252806014472 0.005355088686745437 0.009307774702247307 7.737260310226013e-08 7.11141279161429 0.12240435507152425 SAPTS(ph)PTATNISSK ddPTM_A549_PD325901_60min_R1 2 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SAPTS(0.983)PT(0.014)AT(0.002)NISSK;SAPT(0.013)S(0.924)PT(0.063)ATNISSK 156.24 5.848899999999999e-19 19604000.0 5845.9 5503.799999999999 4683.7 5449.5 7082.1 6352.1 6071.200000000001 6511.200000000001 6853.1 7098.0 7446.8 True False 6439.371464475877 5967.624541587778 5001.564047376107 5786.103238287535 6584.677727918646 6300.370603632044 6302.242838288115 6381.329008062417 6565.0880392972085 6649.831068647743 6530.890809154586 0.9859866980855929 0.9137535316350325 0.7658318280815893 0.8859592676357326 1.0082357706376999 0.9647030991240254 0.9649897728276261 0.9770993260394857 1.0052362275135096 1.018211950401381 1.0 12.673064072497779 -6.755701913726894 24.170490348383073 0.9951178525936584 0.8810127648203896 0.4865139721046049 0.050786237703045745 55.157407195774496 232360.05046497597 0.007177173440701771 0.014615126450261057 1.75508472428671e-07 6.755701913726894 -0.11410508777326878 SAQGSS(ph)SPVPSMVQK ddPTM_A549_PD325901_60min_R1 1 SAQGSSSPVPSMVQK 15 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGSS(0.5)S(0.5)PVPSMVQK 226.19 3.9643999999999996e-54 11994000.0 3168.5 3473.1 3609.0 3186.7 4296.8 4167.5 3663.1 3555.9 3676.1 4335.3 4697.9 True False 3490.163787473582 3765.790325845508 3853.928442680008 3383.5352214791965 3995.0075911552844 4133.561261730221 3802.5012750252317 3484.974784950415 3521.606300982105 4061.5684181330744 4120.0880824417645 0.8471090223404013 0.9140072373437506 0.9353995267974909 0.8212288557369747 0.9696413065003331 1.0032701192350413 0.9229174714079619 0.8458495826344202 0.8547405372205125 0.9857965016432346 1.0 12.008459465454937 -10.972420545260047 1.2661195927317273 0.9995188943855707 0.8996822792269279 0.3003006993796754 0.05361922907316079 0.4610263096432628 1.3247609853952613 0.03910675057702512 0.009215819208851618 1.0655637921165842e-11 10.972420545260047 -0.09983661515864284 SAQGSSS(ph)PVPSMVQK ddPTM_A549_MK2206_60min_R1 2 SAQGSSSPVPSMVQK 15 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGSS(0.015)S(0.982)PVPS(0.003)MVQK;SAQGSS(0.073)S(0.926)PVPS(0.001)MVQK 179.56 4.2887e-28 16963700.0 7257.7 8106.5 7684.9 6642.299999999999 10396.7 8130.200000000001 6852.1 7240.3 10917.599999999999 12350.7 12115.8 True False 8482.622326271116 8519.086224338971 8774.734376975255 8269.663798184181 8867.359202425208 8990.53236761002 8097.037874980967 8266.634697488806 8444.781031824688 9560.668292066317 9107.112480931013 0.9314283033214436 0.9354321956796642 0.963503459010558 0.9080445438111884 0.9736740620028781 0.9871990036836489 0.8890894772558264 0.9077119355666192 0.9272731669348379 1.0498023728250843 1.0 13.15277798745106 -10.69266895913725 0.986291186194671 0.9994836822301437 0.9363078992932902 0.49269123587855634 0.03247720165079017 0.43612954903935747 0.7640218127047159 0.018863020193529593 0.005121772911165576 2.0292289093955143e-11 10.69266895913725 -0.06317578293685355 SAQGSSS(ph)PVPSMVQK ddPTM_A549_PD325901_60min_R1 1 SAQGSSSPVPSMVQK 15 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGSS(0.001)S(0.999)PVPSMVQK 233.78 4.107100000000001e-55 9070400.0 5209.2 4468.3 4525.1 3857.2 4773.7 4566.2 4451.7 4527.8 4392.3 4703.8 5373.6 True False 5738.034149189646 4844.859322500212 4832.200497636831 4095.4504836632127 4438.41178037097 4529.014381118783 4621.111879563713 4437.489477009617 4207.706905634697 4406.801265244469 4712.681266056973 1.2175731447228915 1.0280473151017553 1.0253611956405144 0.8690276834889392 0.9418018172242146 0.9610270937988001 0.9805695778424933 0.9416061105109269 0.8928477586508242 0.9350942736111603 1.0 12.202332395162665 -5.10170461261521 1.3048402820020417 0.9469497329777574 1.4125559388914743 0.8003369026982103 0.03960411796610235 0.7283596758317922 0.8115860356359482 0.00682742612951682 0.49550228336546764 7.912165946264813e-06 5.10170461261521 0.46560620591371693 SAQGSSSPVPS(ph)MVQKSPR ddPTM_A549_MK2206_60min_R1 1 SAQGSSSPVPSMVQKSPR 18 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGS(0.003)S(0.01)S(0.007)PVPS(0.57)MVQKS(0.41)PR 40.012 0.024243 11905000.0 1181.3 1378.7 1154.6 961.75 1379.4 991.47 1127.9 986.41 1413.2 1531.6 1975.2 True False 1380.674559987885 1448.8699410961747 1318.3396415900836 1197.3787931745983 1176.492087280131 1096.3866973154786 1332.8248302259215 1126.2366382539306 1093.112456416672 1185.6104962576023 1484.7033272532524 0.9299329601033334 0.975864951940688 0.8879481963774225 0.8064768032747569 0.792408870974027 0.7384550685582609 0.8977044812660918 0.7585600554539765 0.7362497519547991 0.7985504406803067 1.0 10.535958965816166 -4.954127814027692 18.80180777037921 0.8577590499134181 1.4557169964763055 0.04494673487487666 0.08838607364417961 1804.608238171747 127187.44814903564 0.0151922847108723 48141.83931962835 1.1114045898016274e-05 4.954127814027692 0.5979579465628874 SAQGSSSPVPS(ph)MVQKSPR ddPTM_A549_PD325901_60min_R1 2 SAQGSSSPVPSMVQKSPR 18 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGS(0.001)S(0.002)S(0.003)PVPS(0.698)MVQKS(0.296)PR;SAQGSSS(0.001)PVPS(0.796)MVQKS(0.204)PR 93.572 1.105e-06 49703000.0 6400.200000000001 6055.4 6164.0 5786.200000000001 7519.5 6603.9 6422.9 5984.2 6384.9 6506.8 7080.7 True False 7049.943592421787 6565.709809428146 6582.326107143141 6143.600432586354 6991.3562608667235 6550.120027916067 6667.326974245738 5864.840436485917 6116.564857087853 6095.959537542565 6209.818788255479 1.1352897456130637 1.0573110155558416 1.059986825958944 0.9893365075653475 1.125855117397202 1.0548005104922213 1.0736749656617253 0.9444463093799108 0.9849828256914684 0.981664641981461 1.0 12.600335453735921 -8.242190099760117 24.5189384440932 0.9890757448253582 1.06830977682522 0.5641942703683387 0.03886912035175868 390.7116620971695 497672.8446804831 0.005931688867276308 0.007651347894777963 5.7254536107235e-09 8.242190099760117 0.0792340319998619 SAQGSSSPVPSMVQKS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SAQGSSSPVPSMVQKSPR 18 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGSSSPVPS(0.001)MVQKS(0.999)PR;SAQGSSSPVPS(0.258)MVQKS(0.741)PR 119.52 9.874799999999999e-11 40623000.0 9417.599999999999 10025.8 8993.5 8480.1 11899.1 8479.900000000001 9125.8 8585.5 13927.0 13260.4 13174.599999999999 True False 11007.060641786073 10536.070396345856 10268.913534245987 10557.724880686153 10148.75815264246 9377.237389497948 10783.839733731464 9802.520916991034 10772.556736848992 10264.866430252227 9902.983219537611 1.1114893762588858 1.0639289356321666 1.036951523252754 1.0661155983640163 1.024818272197004 0.9469103583854996 1.0889486021198147 0.9898553496133998 1.087809248792404 1.0365428480178231 1.0 13.273647479319802 -14.999999760820177 0.004786953449398999 7.17367011259613e-06 2.0136248300436383 0.1011392853539862 0.04434267679494248 92083.15364530675 34.35583317201786 7751.491012068364 6733.941224280959 1.0000005507320457e-15 14.999999760820177 2.0136176563735257 SAQGSSSPVPSMVQKS(ph)PR ddPTM_A549_PD325901_60min_R1 3 SAQGSSSPVPSMVQKSPR 18 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SAQGS(0.001)S(0.002)S(0.003)PVPS(0.132)MVQKS(0.862)PR;SAQGS(0.005)S(0.02)S(0.006)PVPS(0.318)MVQKS(0.65)PR;SAQGSSSPVPS(0.018)MVQKS(0.982)PR 119.83 9.483399999999999e-11 62014000.0 8628.300000000001 7652.7 7843.0 8425.0 8984.1 10083.599999999999 9254.1 9665.1 9004.6 9396.0 10491.2 True False 9504.238664181259 8297.619886152988 8375.273143790335 8945.393115436736 8353.087809462435 10001.482504806921 9606.269839537821 9472.32199837573 8626.167976340002 8802.73495646861 9200.848909196247 1.0329741046700347 0.9018319905089973 0.9102717832285291 0.972235627790368 0.9078605563355708 1.0870173614969854 1.0440634265753843 1.0295052219483949 0.9375404445255208 0.9567307368421492 1.0 13.16755126111294 SAQIWSLAS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 SAQIWSLASPLR 12 0 P59923;A0A087X0J9 P59923 ZNF445 Zinc finger protein 445 1 SAQIWS(0.037)LAS(0.963)PLR 47.915 0.034421 869170.0 1124.0 1437.6 1120.8 1146.9 1265.1 1247.2 1116.6 1613.9 1266.4 1355.1 1751.4 True False 1238.1076525549338 1558.7515972576393 1196.864227917915 1217.741408201115 1176.2437403580682 1237.0432167078416 1159.092824026965 1581.7094984199425 1213.1776120246288 1269.5387547371874 1535.9889030393372 0.8060654931197934 1.014819569446928 0.7792141112150098 0.7928061236585173 0.7657892176372997 0.8053724960252271 0.7546231758142332 1.0297662276661868 0.7898348807234573 0.8265285981071142 1.0 10.584952077812336 -10.961067856586592 0.8423066955522349 1.0176232873368631 0.8349220888779654 0.0 0.10393460324894893 0.792711907796977 0.8278635122884791 0.10211964413550859 0.01604740773682093 1.0937854537943423e-11 10.961067856586592 -0.18270119845889776 SAQQEASADVAT(ph)PK ddPTM_A549_MK2206_60min_R1 2 SAQQEASADVATPK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SAQQEASADVAT(1)PK;SAQQEASADVAT(1)PK 139.6 9.680599999999999e-10 12412600.0 4288.6 4652.0 4172.700000000001 3416.5 5946.5 4183.7 3755.2 3878.3 5713.0 6272.5 6486.299999999999 True False 5012.410833796696 4888.766929701459 4764.451604419662 4253.542653372511 5071.77772728092 4626.416357084699 4437.471231903874 4428.060901795621 4419.014621786333 4855.537893559552 4875.5726972269995 1.0280660642487238 1.002706191312041 0.9772086071302888 0.8724190813095105 1.0402424581148206 0.9488970105431902 0.9101435887578299 0.9082134913738642 0.9063580621615311 0.995890779419853 1.0 12.251355976123726 -5.812198377065223 3.174898665578565 0.9487653608075683 1.0191266092423743 0.23363433702657765 0.04709565417303013 0.2845889677714687 5.712860314726743 0.006976228759162112 0.028213609805911834 1.5409963957157472e-06 5.812198377065223 0.07036124843480596 SAQQEASADVAT(ph)PK ddPTM_A549_PD325901_60min_R1 1 SAQQEASADVATPK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SAQQEASADVAT(1)PK 160.81 3.6735e-19 7253200.0 3169.2 3307.1 3203.2 3552.4 4657.5 4338.6 3259.3 3886.7 4402.7 4014.4 4161.3 True False 3490.9348509582683 3585.800923268461 3420.5884144063753 3771.823679914239 4330.3732675027295 4303.267880058247 3383.3344450573936 3809.176719442834 4217.66982980167 3760.930098898211 3649.4864806541023 0.9565550850684569 0.9825494469637748 0.9372793768490132 1.0335217570769601 1.1865705738212766 1.1791433953433819 0.9270713737377633 1.0437569065223966 1.1556885748610122 1.0305367943777488 1.0 11.833477761275585 -6.471763650270408 6.015627870141622 1.077368260831688 0.9638415256971335 0.31324208040077295 0.07476621658120718 0.22814119350586168 19.19784530150576 0.011933961497965367 0.027678979409565194 3.374709155506681e-07 6.471763650270408 -0.11352673513455436 SAQS(ph)PSTSK ddPTM_A549_MK2206_60min_R1 3 SAQSPSTSK 9 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 SAQS(0.699)PS(0.102)T(0.174)S(0.025)K;SAQS(0.864)PS(0.122)T(0.013)S(0.002)K;SAQS(0.577)PS(0.303)T(0.044)S(0.075)K 80.706 0.0016515999999999998 7356100.0 3465.2 2530.5 1759.6 1675.62 2212.3 1828.32 1769.4699999999998 1761.9 2118.2 4145.200000000001 4409.8 True False 4050.0410439939183 2659.2916413606085 2009.1377389069025 2086.1469752214393 1886.8736006160882 2021.7916088594075 2090.959794609328 2011.654720592453 1638.4310820703336 3208.79644103357 3314.7249557115174 1.2218332133456191 0.8022661538715155 0.606125022664402 0.6293574891113826 0.5692398693185281 0.6099424947387294 0.6308094404654748 0.6068843561593918 0.49428869784420426 0.9680430454733734 1.0 11.694673450175422 -3.9235400645485927 12.83238367119371 0.7261934546677755 49.54830677959867 0.0 0.21824965029697302 0.0 0.0 0.03145219329384755 0.0 0.00011925042498406686 3.9235400645485927 48.822113324930896 SAQS(ph)PSTSK ddPTM_A549_PD325901_60min_R1 1 SAQSPSTSK 9 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.005)AQS(0.988)PS(0.005)T(0.002)SK 112.64 2.8716e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SAQSPS(ph)TSK ddPTM_A549_MK2206_60min_R1 1 SAQSPSTSK 9 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.001)AQS(0.339)PS(0.557)T(0.084)S(0.019)K 66.595 0.0054361 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SARLS(ph)AK ddPTM_A549_PD325901_60min_R1 1 SARLSAK 7 1 A0A087WZE9;Q15651-2;Q15651;P05114;A6NEL0;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035;P05204;O00479 A0A087WZE9;Q15651;P05114;P05204;O00479 HMGN3;HMGN1;HMGN2;HMGN4 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-14;Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 4 1 S(0.001)ARLS(0.999)AK 44.98 0.020950999999999997 5541700.0 2265.3 1593.1 1590.1 1495.1 2353.2 1581.2 1186.9 1229.3 1243.7 1447.6 1569.0 True False 2495.2715883742817 1727.3561279849357 1698.0137480480705 1587.4489313815384 2187.919350099285 1568.3232314451889 1232.068128996602 1204.7806471328065 1191.4316140832527 1356.1982889510382 1376.0229467104728 1.8133938785973667 1.255325088956083 1.2340010405403126 1.1536500428110603 1.5900311512462317 1.1397507833676976 0.8953834177998194 0.8755527297077139 0.8658515593300933 0.9855927854932743 1.0 10.426288813444373 -7.531149450404068 4.344437645917463 0.9281030127966703 1.3777114677205742 0.6319641991245948 0.17545737483448914 0.10458480428163063 4.8161697643175865 0.02604690393519079 0.04030241125943836 2.9434085670542093e-08 7.531149450404068 0.4496084549239039 SARLS(ph)AKPAPPKPEPK ddPTM_A549_PD325901_60min_R1 1 SARLSAKPAPPKPEPK 16 3 A0A087WZE9;Q15651-2;Q15651;P05204 A0A087WZE9;Q15651;P05204 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 1 S(0.176)ARLS(0.824)AKPAPPKPEPK 46.353 0.005126100000000001 4767500.0 2252.3 2390.6 1889.4 1578.7 3103.7 2734.5 2172.9 2061.5 2261.7 2058.7 1921.4 True False 2480.9518379443734 2592.064251811431 2017.6260458851798 1676.2127135121634 2885.7068191837293 2712.2311386205847 2255.5908985565043 2020.3817652845366 2166.648614273613 1928.7133306600588 1685.0799807581284 1.4723050930960424 1.5382440485971738 1.1973473478555223 0.9947377766354001 1.712504363078025 1.6095563234929267 1.338566076573825 1.1989827120108292 1.28578384350565 1.1445826623566664 1.0 10.718601353876156 -9.977966128687473 0.46024828019899094 0.9717282778690359 1.4059142882440434 0.27769525089801683 0.19495771354812394 1.029652272823255 0.4173038665093502 0.19245329553962928 0.0610385506380307 1.05204392119059e-10 9.977966128687473 0.4341860103750075 SARPELKDS(ph)LDWTR ddPTM_A549_MK2206_60min_R1 1 SARPELKDSLDWTR 14 2 K7EJU9;B2WTI3;B2WTI4;Q6NYC1-2;Q6NYC1;Q6NYC1-3 K7EJU9 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 1 S(0.016)ARPELKDS(0.983)LDWT(0.001)R 51.193000000000005 0.004991300000000001 2130300.0 492.96 427.89 322.57 480.55 708.06 487.93 575.59 484.69 663.89 606.82 662.07 True False 576.1595962851324 449.66777333404065 368.3152764487382 598.2847715727091 603.90531196141 539.562428738279 680.1672524423607 553.3962918008714 513.519975014481 469.73894054520696 497.65974679757 1.15773799266006 0.9035646869726621 0.7400945702738452 1.202196431241745 1.2134903733876972 1.0841994599932019 1.36673150042619 1.111997294058772 1.031869622405612 0.9438957913875237 1.0 8.959015889138294 -4.900624953282166 18.07853179855382 1.0487952279376551 7.977625205489287 0.02548673841535165 0.16154008863015287 547.1112999849092 99830.58657621665 0.021818389717024624 465.9265944783256 1.2571151107463678e-05 4.900624953282166 6.928829977551631 SAS(ph)AADVSR ddPTM_A549_MK2206_60min_R1 1 SASAADVSR 9 0 A0A1B0GV45 A0A1B0GV45 1 S(0.391)AS(0.604)AADVS(0.004)R 57.203 0.013977000000000002 1653400.0 508.73 874.51 830.3 748.48 1168.9 693.95 930.01 690.35 1079.0 1286.7 1217.7 True False 594.5911867456498 919.0188236657837 948.0490251275298 931.857633600544 996.9563584324673 767.3833283932714 1098.9807787555712 788.2092266082064 834.608222808936 996.0335763480399 915.3114831896941 0.649605295755285 1.0040503594068002 1.0357665587497618 1.0180770707182538 1.089199006832358 0.8383849022838434 1.2006631610540088 0.8611377013008081 0.9118297302471047 1.0881908450192759 1.0 9.838118970092232 -5.258631514892062 24.494110823607176 0.9780937497740884 0.6496051363630321 0.4775428013381724 0.10342742073852941 121.69390803749818 1061503.8784407545 0.012480132785441357 0.11927171812076733 5.512752376032017e-06 5.258631514892062 -0.3284886134110563 SAS(ph)AADVSR ddPTM_A549_PD325901_60min_R1 1 SASAADVSR 9 0 A0A1B0GV45 A0A1B0GV45 1 S(0.312)AS(0.685)AADVS(0.003)R 79.07 0.0017823000000000001 3142500.0 1219.1 1468.0 1382.3 1396.4 1298.8 1186.7 1507.3 1207.8 1548.8 1280.3 1403.9 True False 1342.8621345460142 1591.7135119464485 1476.1111904451595 1482.652456545502 1207.5767686167565 1177.0359086491314 1564.6611263262082 1183.7094814992297 1483.7093220970833 1199.4616395026346 1231.229200055343 1.0906678744182265 1.2927840826670631 1.1988922861631361 1.2042050793457935 0.9807895788716484 0.9559844004643688 1.2708122307819516 0.9614046527210552 1.2050634618074292 0.9741984997177776 1.0 10.265883637064215 -11.023998154787972 1.2659452035969436 0.9987852312997716 1.136382797053344 0.1779361330628373 0.11533074917237583 0.7114359632595285 2.000741443465501 0.08552907101446884 0.01856138067546305 9.462411817067688e-12 11.023998154787972 0.1375975657535724 SAS(ph)ADNLT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 SASADNLTLPR 11 0 Q8ND76;Q8ND76-3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 2 S(0.173)AS(0.828)ADNLT(0.998)LPR;S(0.186)AS(0.814)ADNLT(1)LPR 60.157 0.012916999999999998 3265000.0 571.24 449.02 491.67 581.87 860.37 629.1700000000001 507.27 626.34 964.73 864.47 565.23 True False 667.6513465228811 471.87320008051364 561.3961991863819 724.4281761211372 733.8107127252472 695.7483517907552 599.4343927907642 715.1256130858027 746.2201953572431 669.1856265995104 424.8677914456034 1.5714331845471552 1.1106353778312432 1.3213432754604522 1.7050672955374802 1.7271507219421651 1.6375643571932967 1.4108727582083869 1.6831721007907032 1.7563585905588304 1.57504437868218 1.0 8.730870169145017 -10.909287951961222 1.1576896233532221 0.9994688622221367 1.5574925539326894 0.0 0.2505772448922235 0.33001518977188304 0.7844195975130421 0.1469662459804105 0.03478754123862293 1.2322875139154988e-11 10.909287951961222 0.5580236917105527 SAS(ph)ADNLT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 SASADNLTLPR 11 0 Q8ND76;Q8ND76-3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 2 S(0.082)AS(0.918)ADNLT(1)LPR;S(0.402)AS(0.598)ADNLT(0.999)LPR 67.456 0.0070389 5283300.0 960.8900000000001 970.3699999999999 1044.71 924.9 777.96 922.1099999999999 919.79 866.97 835.4 832.34 809.15 True False 1058.4388454301686 1052.1464854138114 1115.6103029515743 982.0289723996952 723.3187734163014 914.6006418845956 954.7931117784003 849.6776032251921 800.2910431817551 779.7859103519668 709.6296796244603 1.491536890044255 1.4826697862617764 1.5721020906875838 1.383861189288743 1.019290475278719 1.2888421498500555 1.3454808038520623 1.1973535318799602 1.1277586974734106 1.098863157421253 1.0 9.47092254010083 -2.0000000024565168 0.1301392042630484 0.8990815764984342 3.1413320051189557 0.6513758676899478 0.11188917927410101 29.258821531283647 0.24746002019844945 0.30983296983610603 12.127552785033407 0.00999999994343661 2.0000000024565168 2.2422504286205216 SAS(ph)ADNLTLPR ddPTM_A549_PD325901_60min_R1 1 SASADNLTLPR 11 0 Q8ND76;Q8ND76-3;Q8ND76-2 Q8ND76 CCNY Cyclin-Y 1 S(0.07)AS(0.827)ADNLT(0.102)LPR 96.53299999999999 0.00028164 178170000.0 5403.3 5234.5 5195.7 5387.0 6157.1 5957.8 5962.4 5273.6 6413.4 6400.7 6202.2 True False 5951.839038300777 5675.629685479348 5548.311446282219 5719.742755235334 5724.646536841884 5909.281652102294 6189.302394750473 5168.413910940835 6143.86710119927 5996.558709649704 5439.368718985142 1.0942150359336644 1.0434353651499264 1.0200285608358985 1.051545326440474 1.0524468615008633 1.08639107907449 1.1378714543009047 0.9501863502838873 1.1295184089571282 1.1024365178113023 1.0 12.409223509880887 -5.245980643154776 21.7365444752798 1.0571174385694424 1.0942152021203322 0.038249697284832296 0.05307471890277839 1464.1870111157973 2058571.2841762286 0.007773076903677033 0.21145768568253073 5.675699018798829e-06 5.245980643154776 0.037097763550889784 SAS(ph)AGPAGESKPK ddPTM_A549_MK2206_60min_R1 1 SASAGPAGESKPK 13 1 F5H5Z1;H0YGL7;F5H510;Q8N5U6;Q8N5U6-2 F5H5Z1 RNF10 RING finger protein 10 1 S(0.036)AS(0.964)AGPAGESKPK 84.84200000000001 9.641299999999999e-05 12638000.0 2387.4 2695.8 2581.6 2446.8 2770.2 2522.5 2031.3 1724.7 3070.3 3064.1 3363.8 True False 2790.334753673983 2833.0047053072226 2947.7096992282713 3046.2661098410263 2362.7072496617498 2789.429275700016 2400.360916426913 1969.1815066722288 2374.8819522616086 2371.917681890128 2528.4756238428954 1.1035640317675286 1.1204397932859995 1.1658050690432222 1.2047836574398803 0.9344394018997094 1.103205919565288 0.9493312467765587 0.7788018551981825 0.9392544384715689 0.9380820837359612 1.0 11.304052154671485 -6.766940796814459 24.996345398746364 0.9622164190947154 1.1478587584095978 0.613006215142255 0.07584087309440249 75.89290429381163 344830.0633594461 0.01146081049574147 0.022100121171031807 1.7102484409045335e-07 6.766940796814459 0.1856423393148824 SAS(ph)AGPAGESKPK ddPTM_A549_PD325901_60min_R1 2 SASAGPAGESKPK 13 1 F5H5Z1;H0YGL7;F5H510;Q8N5U6;Q8N5U6-2 F5H5Z1 RNF10 RING finger protein 10 1 SAS(1)AGPAGESKPK;S(0.024)AS(0.976)AGPAGESKPK 131.56 1.0627e-08 46918000.0 8069.5 8394.9 8289.3 8739.3 9624.7 9518.6 9950.5 10097.7 9485.7 10116.9 10306.4 True False 8888.709699548079 9102.367684904111 8851.861745610251 9279.106712609644 8948.694275412463 9441.083677481769 10329.171722622523 9896.29345200759 9087.049016410314 9478.117207439045 9038.778137652529 0.9833972650042914 1.0070351928416839 0.9793206128974837 1.026588613117517 0.9900336239181702 1.04450884109583 1.1427619491615404 1.0948707116488388 1.0053404207983272 1.0486060242983923 1.0 13.141912046916493 -6.4908318763589055 1.7628124205679803 1.02340672630827 0.9918539177790285 0.10641451937865265 0.0458334869254436 0.9286941816438053 5.644846686650088 0.007875540712763055 0.02283574676355842 3.2297441750395715e-07 6.4908318763589055 -0.03155280852924147 SAS(ph)APTLAETEK ddPTM_A549_MK2206_60min_R1 2 SASAPTLAETEK 12 0 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 SAS(1)APTLAETEK;S(0.001)AS(0.999)APTLAETEK 246.63 2.4552999999999998e-51 29470000.0 10336.3 12024.5 10136.6 11320.6 15564.0 15059.1 13192.599999999999 15219.2 16807.6 14651.5 14360.2 True False 12080.814741727554 12636.495689207912 11574.12230291187 14094.147508201051 13274.556217506128 16652.643966578442 15589.524652219596 17376.568206845244 13000.705436221944 11341.715974091323 10794.16601864223 1.1191985301007226 1.1706782781906315 1.0722572066172231 1.3057189859651535 1.229789887850539 1.5427448436329623 1.4442546673170922 1.6098110939589751 1.2044196294339808 1.0507264715498574 1.0 13.39796416137693 -9.678624289279508 1.3157907332758945 1.0442353411982388 1.305322388175527 0.29369533949233795 0.16337506101656463 0.3643852567734254 1.2817137712754814 0.047294545294650485 0.03385163655311037 2.0959248687521972e-10 9.678624289279508 0.26108704697728813 SAS(ph)APTLAETEK ddPTM_A549_PD325901_60min_R1 2 SASAPTLAETEK 12 0 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 SAS(0.997)APT(0.003)LAETEK;SAS(0.813)APT(0.183)LAET(0.004)EK 172.92 8.929e-16 42170000.0 12889.6 14679.5 13360.900000000001 16924.4 15666.800000000001 15087.0 13258.300000000001 15641.1 12827.4 15902.4 16480.4 True False 14198.142703177997 15916.592982709728 14267.651019618557 17969.7817498988 14566.418015525876 14964.136474078905 13762.851861720137 15329.125990294428 12288.3089864851 14898.319750079441 14453.415277863147 0.9823382522554288 1.1012340458443468 0.987147379724908 1.2432896588407947 1.0078184107693775 1.0353356757830088 0.9522214367423126 1.0605884972925754 0.8502010597665367 1.0307819614716052 1.0 13.819122814991825 -7.8429005013450315 1.2386859290091545 0.9348112920491346 1.0713340675486234 0.11740456652829623 0.08723320903927727 0.39008896373923235 1.210145494704441 0.01532940544057474 0.024057484702493828 1.4358183475729908e-08 7.8429005013450315 0.13652277549948877 SAS(ph)APTLAETEKETAEHLDLAGASSR ddPTM_A549_MK2206_60min_R1 3 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.028)AS(0.935)APT(0.037)LAETEKETAEHLDLAGASSR;S(0.145)AS(0.796)APT(0.059)LAETEKETAEHLDLAGASSR;S(0.161)AS(0.804)APT(0.028)LAET(0.006)EKET(0.001)AEHLDLAGASSR 274.69 1.4282999999999995e-139 49458100.0 3198.2799999999997 4839.400000000001 3486.4 4229.3 4943.4 4746.3 4999.4 5066.0 6819.0 7039.299999999999 7132.699999999999 True False 3738.0714735613724 5085.704789251346 3980.8239446039024 5265.478689860492 4216.232408482384 5248.550315661046 5907.726266718209 5784.121013974324 5274.507387705412 5449.117240993823 5361.453737494565 0.6972122966238989 0.9485682500037614 0.7424896566325987 0.9820990626174977 0.7863972375620369 0.9789416402040467 1.1018888823759432 1.0788344537086827 0.983783064436217 1.016350696619127 1.0 12.388408519582276 -7.370039792760213 5.534587190647048 1.008658008919921 0.8417529860311123 0.5622255535220084 0.08503474002673428 0.14458836615036585 6.26057671169522 0.011788653431201425 0.01896211557387066 4.26540434724849e-08 7.370039792760213 -0.16690502288880882 SAS(ph)APTLAETEKETAEHLDLAGASSR ddPTM_A549_PD325901_60min_R1 3 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.047)AS(0.924)APT(0.029)LAETEKETAEHLDLAGASSR;S(0.044)AS(0.954)APT(0.002)LAETEKETAEHLDLAGASSR;S(0.124)AS(0.845)APT(0.024)LAET(0.007)EKETAEHLDLAGASSR 321.2 4.397499999999998e-210 117228500.0 8986.4 9739.7 10124.1 10575.300000000001 12354.7 12542.5 10205.0 12034.0 11866.0 12908.0 13185.300000000001 True False 9898.69271256197 10560.498700480122 10811.182307158964 11228.512262751103 11486.94849340118 12440.358038452629 10593.356859390278 11793.97242950963 11367.31328512654 12092.986677106941 11563.591688503247 0.8560223310551034 0.9132542020641891 0.9349328996031273 0.971022893684037 0.9933720251314072 1.0758212823115398 0.916095720495078 1.0199229397934753 0.9830261731247523 1.0457811900371774 1.0 13.49730195268049 -5.720367975081488 1.1017330918088608 0.9943837863472137 0.8438490019545242 0.5930408885198664 0.039068372529305555 0.4242156943225556 0.6605136189699948 0.004938535894921698 0.06107079392460847 1.9038469164279668e-06 5.720367975081488 -0.15053478439268952 SAS(ph)APTLAETEKETAEHLDLAGASSRPK ddPTM_A549_MK2206_60min_R1 2 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.346)AS(0.648)APT(0.005)LAETEKETAEHLDLAGASSRPK;S(0.008)AS(0.992)APTLAETEKETAEHLDLAGASSRPK 186.88 5.997199999999999e-67 52636000.0 2501.48 3331.6 2833.91 2809.22 4046.0 3330.4399999999996 2208.84 2942.34 5381.4 5253.2 5324.2 True False 2923.6686686857647 3501.1642095858506 3235.8010511853063 3497.479026110677 3450.8387597037927 3682.864950232851 2610.157636311929 3359.4257055383378 4162.521492329943 4066.4984714941515 4002.0541995553695 0.7305419974098767 0.8748417774988735 0.8085350397165549 0.8739209545186192 0.8622668728692338 0.9202436465358264 0.6522044695451448 0.8394253395947441 1.0400962317782705 1.01610279839437 1.0 11.96652499036158 -8.735906588377365 7.502600940505664 1.0189799120080751 0.8222125993695072 0.6089651415989492 0.07084491460962478 0.08423480140934593 18.053615935625817 0.01167692717729672 0.013097803359519076 1.8369334035777086e-09 8.735906588377365 -0.19676731263856795 SAS(ph)APTLAETEKETAEHLDLAGASSRPK ddPTM_A549_PD325901_60min_R1 1 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.449)AS(0.551)APTLAETEKETAEHLDLAGASSRPK 199.03 9.021999999999999e-78 25318000.0 4835.6 5670.2 5408.9 6024.3 7502.3 7445.9 7331.8 7402.4 7091.3 7978.1 9220.4 True False 5326.506552219428 6148.0476535686275 5775.98048035797 6396.407328822018 6975.364329529951 7385.263059080275 7610.815661114906 7254.753324929538 6793.277321660023 7474.361404448937 8086.349252931322 0.6587034996402804 0.760299544487266 0.7142877829898533 0.7910129934720918 0.8626098269254651 0.9133000354150049 0.941193043122144 0.8971605230011148 0.8400920006265427 0.9243184001407634 1.0 12.981272800241864 -3.0155335820641715 0.18919182378318466 0.9732975417227931 1.0805124067053163e-13 0.8067693544311522 0.04379072250539747 14.096881385937706 0.21294354720177314 0.05572817800894854 3.7375521629713058 0.0009648647002173183 3.0155335820641715 -0.9732975417226851 SAS(ph)ASHQADIK ddPTM_A549_MK2206_60min_R1 5 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.002)AS(0.499)AS(0.499)HQADIK;SAS(0.975)AS(0.025)HQADIK;S(0.137)AS(0.727)AS(0.137)HQADIK;S(0.004)AS(0.99)AS(0.007)HQADIK;S(0.027)AS(0.965)AS(0.007)HQADIK 169.46 5.001699999999999e-15 48450000.0 14317.7 13155.48 13303.759999999998 13190.349999999999 15204.500000000002 11293.55 11471.310000000001 12428.77 18926.9 21209.600000000002 22995.800000000003 True False 16734.17772584316 13825.037740401747 15190.433215139874 16421.98634213732 12967.938191279363 12488.625964948229 13555.49853995826 14190.586209011777 14639.987370048622 16418.33662929307 17285.308208206938 0.9681156693461732 0.7998143610674944 0.8788060375994665 0.9500545864921448 0.7502289247652687 0.7224994668604591 0.784220817857457 0.8209622899448324 0.8469613149910549 0.9498434411194221 1.0 14.077258707563269 -10.341325120805395 0.7930770118015479 0.9969709947099804 0.8316161744433127 0.3424083583729304 0.07328001765759366 0.48161275621606014 0.5664689995128893 0.044603663704058966 0.014711212582146183 4.556956461178155e-11 10.341325120805395 -0.1653548202666677 SAS(ph)ASHQADIK ddPTM_A549_PD325901_60min_R1 3 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.019)AS(0.818)AS(0.163)HQADIK;S(0.025)AS(0.839)AS(0.135)HQADIK;S(0.091)AS(0.455)AS(0.455)HQADIK 169.52 4.9767e-15 267555000.0 25213.699999999997 26586.3 25447.2 28725.6 34558.9 32320.6 28858.4 41132.2 33505.7 34385.8 37494.6 True False 27773.376262655074 28826.820805627965 27174.200018444662 30499.91507142899 32131.602085732724 32057.39174946078 29956.62220392241 40311.78600341333 32097.571948210367 32214.67471968267 32883.00189785242 0.8446119471978302 0.8766480899516246 0.8263904890088336 0.9275283067578126 0.9771492938979891 0.9748924945795306 0.9110063094902193 1.2259156304718664 0.9761144085299175 0.9796756032114757 1.0 15.005054388589055 -6.618084033094724 1.500436984661174 1.0016050867815631 0.8480924292992222 0.45768643475223725 0.07526300263479759 0.2905371342872926 1.295277827282628 0.011060538565502804 0.03166931791368205 2.409439173119183e-07 6.618084033094724 -0.1535126574823409 SAS(ph)DAGIR ddPTM_A549_MK2206_60min_R1 2 SASDAGIR 8 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 S(0.066)AS(0.934)DAGIR;S(0.004)AS(0.996)DAGIR 109.88 0.0016381 13811300.0 2054.79 2672.43 2575.0 2448.8 3507.8 2827.0 2399.4 2968.3 4172.1 5059.0 4393.8 True False 2401.5883172077406 2808.445272128562 2940.173719984815 3048.7561099308077 2991.807266754562 3126.151263589275 2835.3399216633356 3389.0656150375003 3227.126011474664 3916.168386371905 3302.6981972890517 0.7271594840785126 0.8503487464987911 0.8902338464950242 0.9231107197240466 0.905867593112299 0.946544636187257 0.8584919820983531 1.026150563142385 0.9771180467302707 1.1857481829815413 1.0 11.689429425896849 -3.1458335637452164 0.2857872731336536 0.9965659929569122 2.3944653886602878e-14 0.6038544391253838 0.07011879644500431 8.033877258763646 0.17963844081061411 0.014116962180577218 3.594612107941892 0.0007147701975777835 3.1458335637452164 -0.9965659929568882 SAS(ph)DAGIR ddPTM_A549_PD325901_60min_R1 2 SASDAGIR 8 0 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 S(0.013)AS(0.987)DAGIR;S(0.006)AS(0.994)DAGIR 112.01 0.0014720999999999998 20217600.0 3856.5 3758.5 3908.9 4554.9 4534.9 4800.799999999999 4217.6 4785.8 4171.6 4135.0 4462.0 True False 4248.009040994752 4075.241985456897 4174.181460125211 4836.245828071544 4216.384268555693 4761.703876500169 4378.103075959277 4690.343464612533 3996.28215912977 3873.9153943164856 3913.202286948457 1.0855582537000352 1.041408464634932 1.066691970933163 1.2358793319225219 1.077476695395591 1.2168304951629216 1.1188031578539612 1.1985946855484684 1.0212306612562314 0.9899604237779878 1.0 11.934133974720416 -8.865856815539942 7.585994775353434 1.009397859976531 1.1292266607878019 0.4614782443028803 0.06081782805340794 0.15206078360044112 9.95869739367296 0.010414254354731622 0.011062740866576012 1.3618936171596923e-09 8.865856815539942 0.1198288008112709 SAS(ph)DTNLQK ddPTM_A549_PD325901_60min_R1 1 SASDTNLQK 9 0 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 UHRF1BP1L UHRF1-binding protein 1-like 1 S(0.002)AS(0.695)DT(0.302)NLQK 91.75200000000001 0.00040327 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SAS(ph)EPSLHR ddPTM_A549_MK2206_60min_R1 6 SASEPSLHR 9 0 P04049;P04049-2;H7C155;P10398;Q96II5 P04049;P10398 RAF1;ARAF RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase A-Raf 1 S(0.025)AS(0.974)EPS(0.001)LHR;S(0.012)AS(0.942)EPS(0.045)LHR;S(0.027)AS(0.965)EPS(0.008)LHR;S(0.433)AS(0.478)EPS(0.089)LHR;S(0.136)AS(0.863)EPSLHR;S(0.124)AS(0.873)EPS(0.002)LHR 91.855 0.00042543 70054800.0 5185.9 5004.490000000001 4451.360000000001 4363.37 6133.9 4360.52 4491.0 3968.6 6573.44 7278.040000000001 7612.34 True False 6061.153136917941 5259.197165094938 5082.629782598678 5432.395845879123 5231.611435528194 4821.947332121086 5306.956567554404 4531.161203327775 5084.566335626666 5633.925709181698 5721.985888103996 1.0592743944928409 0.9191209604394175 0.8882632502057477 0.9493899412043412 0.9142999542177673 0.8427052122141564 0.927467608507662 0.7918861199479809 0.8886016909264797 0.9846102069029259 1.0 12.482300224268746 -4.171320856119588 15.844772934690708 0.9280172794733577 0.9211312078476095 0.0 0.07089102836051886 0.0 0.0 0.009697037458414898 0.0 6.740298714319507e-05 4.171320856119588 -0.006886071625748169 SAS(ph)EPSLHR ddPTM_A549_PD325901_60min_R1 5 SASEPSLHR 9 0 P04049;P04049-2;H7C155;P10398;Q96II5 P04049;P10398 RAF1;ARAF RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase A-Raf 1 S(0.022)AS(0.978)EPSLHR;S(0.076)AS(0.91)EPS(0.014)LHR;S(0.02)AS(0.974)EPS(0.006)LHR;S(0.004)AS(0.922)EPS(0.074)LHR;S(0.208)AS(0.783)EPS(0.009)LHR 112.36 0.00024474 100830900.0 7037.119999999999 5994.6900000000005 5644.139999999999 5768.639999999999 7186.5 6582.77 5386.360000000001 5290.98 6254.4 6589.740000000001 6680.18 True False 7751.523241946062 6499.883564666382 6027.185281371 6124.955791268008 6681.745032079091 6529.162103630437 5591.340877329289 5185.447253206485 5991.5493182618775 6173.662691787937 5858.560209150008 1.3231106219305537 1.1094677416670982 1.028782681444091 1.0454711691281997 1.140509748733728 1.1144653072666337 0.954388224703508 0.8851060786416016 1.0226999645585557 1.0537849695810577 1.0 12.516330438330005 -7.747259952383309 23.81090818519149 0.9957315579293678 1.1186206546603013 0.42750547106656855 0.08195398747066919 115.85060360532938 194541.9010362148 0.012422886587873116 0.018369220752736812 1.7895343852522723e-08 7.747259952383309 0.1228890967309334 SAS(ph)EPSLNR ddPTM_A549_MK2206_60min_R1 1 SASEPSLNR 9 0 H7C560;P15056;A0A2U3TZI2;A0A2R8Y8E0 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.002)AS(0.499)EPS(0.499)LNR 137.85 4.336e-05 49498000.0 4969.7 5430.7 5206.6 4417.1 7352.2 5863.2 5651.4 5461.5 8555.4 8765.8 8492.8 True False 5808.4638625004545 5707.099433604839 5944.974171057451 5499.289698291155 6270.701119400446 6483.6399323228325 6678.186227093511 6235.684350142279 6617.6155601664295 6785.599691887499 6383.803370644196 0.9098751207173095 0.8939967449262037 0.9312589730434535 0.8614440920250676 0.9822829362564881 1.0156390408479268 1.046114023154759 0.9767976844050306 1.0366258444922372 1.062939958816864 1.0 12.640200500043576 -6.926003032283894 4.852356974717916 1.01607709675764 0.9015152056005389 0.8193914784658406 0.02703841567104134 0.057641125575374395 2.5431311022631253 0.0033636916483852516 0.006453289890039756 1.1857604690499366e-07 6.926003032283894 -0.11456189115710114 SAS(ph)FAFEFPKDR ddPTM_A549_PD325901_60min_R1 3 SASFAFEFPKDR 12 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 S(0.01)AS(0.99)FAFEFPKDR;S(0.028)AS(0.972)FAFEFPKDR;S(0.406)AS(0.594)FAFEFPKDR 124.09 1.9197e-06 45132900.0 3805.68 3825.3 4196.5 4438.9 5537.299999999999 5305.2 4283.6 4118.17 5495.1 4838.6 5128.1 True False 4192.029832006456 4147.671455891516 4481.299725604505 4713.080771526661 5148.379150647959 5261.996210133455 4446.6147420758625 4036.0298687081317 5264.160056725 4533.08997023936 4497.376209704254 0.932105662621923 0.9222424948444031 0.9964253637342902 1.0479623121937118 1.1447517198003134 1.1700146851800692 0.9887130928653778 0.8974187794206213 1.1704958205111264 1.0079410213577518 1.0 12.13486785649935 -6.05241920629356 2.3263558773396427 1.0720192366309287 0.9263078938575512 0.24821120487503945 0.08082296735005284 0.3056032716387777 3.2033849393885854 0.012977570146944471 0.047611005141495036 8.863000906150107e-07 6.05241920629356 -0.1457113427733775 SAS(ph)FNTDPYVR ddPTM_A549_MK2206_60min_R1 2 SASFNTDPYVR 11 0 Q9UKV8-2;Q9UKV8 Q9UKV8-2 AGO2 Protein argonaute-2 1 S(0.001)AS(0.923)FNT(0.077)DPYVR;S(0.016)AS(0.92)FNT(0.064)DPYVR 114.24 2.3139e-05 13784300.0 2586.4 2715.7 2430.63 2410.82 3249.7 2480.0 2612.2 2818.1000000000004 3740.1000000000004 3769.6 4157.6 True False 3022.921088591099 2853.9175303074508 2775.3298831093934 3001.4710082258216 2771.6734348515593 2742.431953909235 3086.8029271355203 3217.5743050692936 2892.9733217124203 2918.044741899099 3125.1531760774214 0.9672873354596204 0.9132088475386618 0.8880620330402129 0.960423646175692 0.886892026947128 0.8775352116824673 0.987728521841596 1.0295733117017565 0.9257060882191942 0.9337285494472058 1.0 11.609711188341286 -7.775107088656204 24.986102352441797 0.9714588293229033 0.9149460811106429 0.3812073761110275 0.037771655083083375 215.28723459526637 393568.3700212891 0.006385326416516655 0.008847958743740739 1.6783901084129196e-08 7.775107088656204 -0.05651274821226038 SAS(ph)ITNLSLDR ddPTM_A549_PD325901_60min_R1 2 SASITNLSLDR 11 0 Q9Y2I7;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4;E9PDH4 Q9Y2I7;E9PDH4 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 S(0.006)AS(0.925)IT(0.069)NLSLDR;S(0.007)AS(0.817)IT(0.176)NLSLDR 215.25 4.020599999999999e-31 69417000.0 17892.6 19275.8 20046.0 18849.5 22154.0 19615.8 20722.0 20259.9 20724.8 21942.0 22300.0 True False 19709.043580164056 20900.239314425977 21406.44210639054 20013.790804679484 20597.979467150937 19456.05542839776 21510.587049513506 19855.800400915923 19853.808728433374 20556.57837535486 19557.241371347067 1.0077619438209415 1.0686701113709478 1.0945532501200654 1.0233442654136946 1.0532149742411339 0.9948261648446212 1.099878384741329 1.0152659070826966 1.0151640689734904 1.0510980554482445 1.0 14.255415266171305 -8.496808453663514 24.728762978618168 1.0075847098920012 1.0491607287715048 0.10637020811153586 0.0335353196439032 587.2677170082004 557049.2036498851 0.004768053686150623 0.005753699443399127 3.1856022273315915e-09 8.496808453663514 0.04157601887950357 SAS(ph)LAK ddPTM_A549_MK2206_60min_R1 1 SASLAK 6 0 F5H527;Q76I76;A0A3B3IS79;K7EKN7 F5H527 SSH2 Protein phosphatase Slingshot homolog 2 1 S(0.012)AS(0.988)LAK 66.07300000000001 0.060869000000000006 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SAS(ph)LETK ddPTM_A549_MK2206_60min_R1 2 SASLETK 7 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.003)AS(0.997)LETK;SAS(1)LETK 107.57 0.0092056 8390400.0 3523.5 5262.2 3921.5 3335.9 4883.4 4705.200000000001 3389.9 4549.6 4662.2 5821.2 5916.200000000001 True False 4118.180658695767 5530.02350332653 4477.627667153571 4153.195649754241 4165.058329000864 5203.101140941018 4005.8009504236647 5194.519732565654 3606.2191440035413 4506.186877001019 4447.044261186557 0.9260489477559095 1.243527875715591 1.0068772434387359 0.9339227149149372 0.9365902573430979 1.1700133471468372 0.9007782956841629 1.1680836590503498 0.8109249497420861 1.0132993090108533 1.0 12.118631048487234 -8.770989645781569 24.99760823795153 0.9107145715612863 1.0349745646948516 0.09472382845430216 0.12002097389030979 248.7965975697251 651217.6463091478 0.02073508984089649 0.022214035444435596 1.694378196431037e-09 8.770989645781569 0.12425999313356528 SAS(ph)LETK ddPTM_A549_PD325901_60min_R1 2 SASLETK 7 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.011)AS(0.947)LET(0.042)K;S(0.021)AS(0.966)LET(0.013)K 73.985 0.01879 18728200.0 10996.8 10004.2 9178.2 9229.8 13407.0 9962.0 9307.8 10080.900000000001 11102.5 11085.8 11739.2 True False 12113.187040583714 10847.28904374295 9801.087845000186 9799.90378360332 12465.338571639102 9880.872774890575 9662.013422423599 9879.828541186946 10635.900534983764 10385.840696085537 10295.35282092006 1.1765684237620135 1.0536102290444445 0.9519914485188373 0.9518764392114867 1.2107733254473467 0.9597410547031214 0.9384829826123569 0.9596396270277622 1.0330778089869552 1.008789196129501 1.0 13.329705651410794 SAS(ph)LETKK ddPTM_A549_MK2206_60min_R1 1 SASLETKK 8 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.019)AS(0.955)LET(0.027)KK 50.284 0.013225 6062200.0 3951.0 5119.0 4401.1 3068.0 4234.5 3430.8 3315.6 4750.3 4689.3 6723.1 5909.2 True False 4617.832207324243 5379.535234983186 5025.242158844721 3819.6601377277534 3611.610659408229 3793.8449788192725 3918.0016021784413 5423.669572183624 3627.1810372733494 5204.347040604261 4441.782554376729 1.0396349102623321 1.2111207987168209 1.1313570840817224 0.8599385699248233 0.8130993841311553 0.8541266782816712 0.8820786596853603 1.2210569756143033 0.816604818644103 1.1716798327905842 1.0 12.116923052738123 -6.250696668456473 23.414627696494897 0.9171455228921785 1.1357459828654421 0.21404561071323625 0.1376294264613823 241.72501853354422 526855.5294476639 0.016725293223780958 0.04369295973773281 5.614399750137236e-07 6.250696668456473 0.2186004599732636 SAS(ph)LETKK ddPTM_A549_PD325901_60min_R1 2 SASLETKK 8 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.008)AS(0.802)LET(0.19)KK;S(0.01)AS(0.951)LET(0.039)KK 56.548 0.0077593 35301000.0 12587.1 12488.3 10910.900000000001 10609.9 15303.5 11397.5 10135.3 11355.400000000001 11168.1 13059.0 13359.0 True False 13864.93312586673 13540.732868692654 11651.37928657172 11265.249426168797 14228.634954208925 11304.682538829087 10521.004387748962 11128.907638861026 10698.743595113918 12234.452511337115 11715.927689678272 1.1834259730095236 1.1557542200112787 0.9944905427195988 0.9615328571969147 1.2144693387570449 0.9648986267462634 0.8980086482624815 0.9498955553187299 0.913179380966947 1.0442581104452926 1.0 13.516183573640335 -7.441463301553822 12.212557384833637 0.9520397449665692 1.0910963825223812 0.4317705754651172 0.07936355625024012 0.7556402889387491 111.9877062156668 0.01157870021937296 0.018509951167515082 3.6185676680599086e-08 7.441463301553822 0.139056637555812 SAS(ph)LSNLHSLDR ddPTM_A549_PD325901_60min_R1 1 SASLSNLHSLDR 12 0 B0QY53;B0QY54;A0A087WUW0;Q9Y3M2 B0QY53 CBY1 Protein chibby homolog 1 1 S(0.368)AS(0.464)LS(0.167)NLHSLDR 71.531 0.00075096 4722600.0 406.07 323.98 477.45 537.6 646.18 300.88 391.46 408.59 525.87 623.28 648.07 True False 447.29392746706543 351.28293160790895 509.852628140086 570.8063310218146 600.7945459999818 298.4297330364462 406.3572245151312 400.440351917346 503.76951266218566 583.9259944303698 568.3614984542106 0.7869884372597085 0.6180625052247617 0.8970569426795219 1.0043015450100916 1.057064117879167 0.5250702833462405 0.7149626173136513 0.7045522136992659 0.8863540440939478 1.0273848528066916 1.0 9.150665017630377 -9.32398274274055 1.5480614418270275 0.9671012735867076 0.7934080715346743 0.22850493012399553 0.15107645446860818 0.42802111517518937 2.116880024662298 0.03545083664562717 0.030581583801195966 4.74260830260418e-10 9.32398274274055 -0.1736932020520333 SAS(ph)LSYPDR ddPTM_A549_MK2206_60min_R1 1 SASLSYPDR 9 0 Q6P4Q7;Q6P4Q7-2 Q6P4Q7 CNNM4 Metal transporter CNNM4 1 S(0.003)AS(0.718)LS(0.279)YPDR 120.22 0.00014232 41221000.0 6959.4 8841.8 9374.5 6933.6 7560.5 6251.7 5252.8 6813.9 7116.0 11290.0 15939.0 True False 8133.976579005911 9291.809853618737 10703.945063300054 8632.33231126113 6448.360465333788 6913.250744457402 6207.165766655482 7779.791191693575 5504.237361916951 8739.581158754461 11980.906405978923 0.6789116201547781 0.7755514932477708 0.8934169670133123 0.7205074489984558 0.5382197512298246 0.5770223479091223 0.5180881609723512 0.6493491333686712 0.4594174410018035 0.7294590962160493 1.0 13.548449437754972 -10.986572965586568 1.2694261089220709 0.9993347259460229 0.6307433279778082 0.18348751699091603 0.14087376300532392 0.3080239590829763 0.8857564255901851 0.09729144192508934 0.022488022155429353 1.0313997799495603e-11 10.986572965586568 -0.3685913979682147 SAS(ph)LVTR ddPTM_A549_MK2206_60min_R1 1 SASLVTR 7 0 Q9H2K8 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 1 S(0.003)AS(0.987)LVT(0.011)R 95.35799999999999 0.011904999999999999 132280000.0 5221.8 4620.7 4315.5 3701.6 5310.1 4499.2 4176.7 3718.2 6283.2 6687.0 6868.7 True False 6103.112179247216 4855.873893394567 4927.5027916871695 4608.492166171136 4528.991324246937 4975.30235767275 4935.5523259195015 4245.266236509934 4860.06523220863 5176.402055676805 5163.0122235239005 1.1820836199922204 0.9405117948917613 0.9543852654921686 0.8925975703047456 0.8771994192870173 0.963643342737811 0.9559443426130122 0.8222460169990496 0.9413235959552889 1.0025934147689786 1.0 12.333997298371749 -5.260413584034205 24.613791198995578 0.9473347468815361 1.1820837120318675 0.6437870644626957 0.05210300571703409 36.74239046794015 881467.9179117865 0.007658366035952031 0.06476797802423545 5.490177883615772e-06 5.260413584034205 0.2347489651503314 SAS(ph)LVTR ddPTM_A549_PD325901_60min_R1 2 SASLVTR 7 0 Q9H2K8 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 1 S(0.005)AS(0.939)LVT(0.056)R;S(0.093)AS(0.523)LVT(0.384)R 90.64 0.012504000000000001 342830000.0 10098.7 9931.5 10093.2 10060.7 11661.5 11106.9 9830.099999999999 10344.1 11795.9 11775.2 11023.599999999999 True False 11123.912589729995 10768.46235960228 10778.185247342162 10682.126589492509 10842.436469990995 11016.44908888096 10204.189834737117 10137.778810710535 11300.159344347217 11031.711862431801 9667.767084357909 1.1506185960694146 1.1138520679739228 1.114857769461665 1.10492179799985 1.1215036911194993 1.1395029475529224 1.0554856923732803 1.048616368418007 1.1688489436852962 1.1410816754450679 1.0 13.238967000805557 -10.989218389749341 1.2173161194419022 0.9989356142784975 1.1163241088846383 0.0 0.05340645684689495 0.28056950033169287 0.7285483239730673 0.027859232215953825 0.006139822059637566 1.0251362955734444e-11 10.989218389749341 0.11738849460614076 SAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_A549_MK2206_60min_R1 2 SASPDDDLGSSNWEAADLGNEER 23 0 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.134)AS(0.866)PDDDLGSSNWEAADLGNEER;S(0.157)AS(0.843)PDDDLGSSNWEAADLGNEER 138.11 4.1394e-23 50700000.0 265.46 815.05 1042.67 969.56 1440.55 1068.58 604.4 917.12 1610.6399999999999 1305.1100000000001 1732.96 True False 310.26315812611847 856.5325636399778 1190.536284511287 1207.1022435252028 1228.6470032850466 1181.656426334004 714.2116565196799 1047.1245685622055 1245.832611663564 1010.2847445617393 1302.6182047371371 0.23818426381406843 0.6575469009454097 0.91395643035062 0.9266738627906639 0.9432134441365208 0.9071394995377462 0.5482893252392437 0.803861457451004 0.9564065718818722 0.7755800900737531 1.0 10.347198578970405 -5.336660349966224 1.863485145833731 0.9261560561200073 0.08147697484424937 0.6397784053851074 0.13097825144527636 0.2984799770977878 1.1880845869219525 0.01947745723702892 0.4135279479697861 4.60616668660757e-06 5.336660349966224 -0.8446790812757579 SAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_A549_PD325901_60min_R1 2 SASPDDDLGSSNWEAADLGNEER 23 0 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.13)AS(0.87)PDDDLGSSNWEAADLGNEER;S(0.214)AS(0.786)PDDDLGSSNWEAADLGNEER 152.14 2.481e-28 39675700.0 2483.43 2225.21 2502.2200000000003 2597.3900000000003 2615.4700000000003 2061.16 2110.24 2436.12 2758.68 3094.19 2919.46 True False 2735.5459853954617 2412.7362560751735 2672.035696271204 2757.824881199315 2431.7684100816673 2044.3745963354193 2190.546337967636 2387.5296755008303 2642.7422731681163 2898.8223153422314 2560.3849279817446 1.0684120014531526 0.9423334084289595 1.0436070245021594 1.077113386764546 0.9497667258956016 0.7984637676909476 0.8555535201085416 0.9324885681868275 1.0321660014032699 1.1321822291881964 1.0 11.322145005802936 -5.239401312764207 22.167309789537466 0.9849056310951193 1.0684124187247543 0.06947969504021245 0.09213977955609631 2648.1406306047684 2663469.454096627 0.012255431802134906 0.6643588117267268 5.762337445954953e-06 5.239401312764207 0.08350678762963504 SAS(ph)PDDDLGSSNWEAADLGNEERK ddPTM_A549_MK2206_60min_R1 2 SASPDDDLGSSNWEAADLGNEERK 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.043)AS(0.957)PDDDLGSSNWEAADLGNEERK;S(0.148)AS(0.768)PDDDLGS(0.042)S(0.042)NWEAADLGNEERK 197.35 1.3930999999999997e-61 183684000.0 3222.93 3620.7999999999997 2827.71 2585.8900000000003 5561.1 3755.2000000000003 3281.9399999999996 2705.13 6443.9 6115.0 5577.0 True False 3766.881790926734 3805.0832543127804 3228.7217979566053 3219.4331660850125 4743.069556744623 4152.572771499979 3878.226015880541 3088.5904616131797 4984.366938793793 4733.617252948055 4192.076982630308 0.898571711954396 0.9076844891157726 0.7701962085464261 0.7679804496493258 1.1314366545264625 0.9905764585683869 0.9251323465551338 0.7367685456184662 1.1889969958677538 1.129181852471125 1.0 12.033449495201383 -8.772474900958294 24.999962073623557 1.089248577380267 0.895934897276209 0.41205870825416946 0.11379484013878177 182.06730948343457 412455.42949854414 0.02191290339474333 0.023435892168745004 1.6885934450062659e-09 8.772474900958294 -0.19331368010405792 SAS(ph)PDDDLGSSNWEAADLGNEERK ddPTM_A549_PD325901_60min_R1 2 SASPDDDLGSSNWEAADLGNEERK 24 1 O00193;E9PM92;E9PQA1 O00193 SMAP;C11orf58 Small acidic protein 1 S(0.001)AS(0.999)PDDDLGSSNWEAADLGNEERK;S(0.004)AS(0.996)PDDDLGSSNWEAADLGNEERK 328.77 5.463199999999997e-219 441230000.0 14473.5 12870.599999999999 12056.3 13388.099999999999 13483.9 16961.0 13133.9 12307.7 18955.5 16683.9 21504.4 True False 15942.83906517244 13955.250631374633 12874.513018421449 14215.052530418818 12536.83738092969 16822.875239401637 13633.717751645845 12062.21326829613 18158.86625452688 15630.475706707824 18859.49512762313 0.8453481366964739 0.7399588661806038 0.6826541713497094 0.7537345212172892 0.66474936344225 0.8920109009048447 0.7229100068366522 0.6395830422113922 0.9628500726899072 0.8287854791942004 1.0 14.203003434850704 -8.833261178719061 7.599293284955475 0.9832329147384136 0.7428250995120111 0.4686093651004797 0.08425285813202595 0.08784499305558506 7.992703351777677 0.011809007320037469 0.012555622660156997 1.4680431511914368e-09 8.833261178719061 -0.24040781522640242 SAS(ph)PDGGPR ddPTM_A549_MK2206_60min_R1 2 SASPDGGPR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.056)AS(0.944)PDGGPR;S(0.007)AS(0.993)PDGGPR 95.64200000000001 0.00091392 213960000.0 2133.7 2222.8999999999996 1645.22 1312.96 1765.76 1551.42 1237.44 1466.79 1772.79 2611.9 2939.3999999999996 True False 2493.8163960434686 2336.036115226434 1878.5369349877346 1634.6352589410137 1506.0190430881278 1715.5902346507507 1462.2668303171952 1674.7119743559797 1371.2558955639054 2021.869975956669 2209.465856687021 1.1286965075725661 1.0572854557387 0.850222206105734 0.7398327763218139 0.6816213242354986 0.7764728427273317 0.6618191568299625 0.7579714206885835 0.6206277826895374 0.9150944649528812 1.0 11.10948192167739 -5.763742591017296 2.799511856833309 0.783992368042137 1.1181645533693867 0.5856699724322358 0.10404948108123079 0.19817888655886523 3.0583576417057974 0.02018423907872743 0.0933420468730643 1.7228894394767546e-06 5.763742591017296 0.3341721853272497 SAS(ph)PDGGPR ddPTM_A549_PD325901_60min_R1 3 SASPDGGPR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.001)AS(0.999)PDGGPR;S(0.282)AS(0.718)PDGGPR;S(0.018)AS(0.982)PDGGPR 114.97 0.00021099 323760000.0 2947.8 2621.7 2882.0 2666.2 2598.0 2331.7 2295.3 2352.4700000000003 2496.25 3041.8 3159.6 True False 3247.0584859443343 2842.6398598569494 3077.5898508738696 2830.885118620463 2415.525442613438 2312.7114082726707 2382.6488975363554 2305.548140372987 2391.34129344321 2849.740228883163 2770.989230354626 1.1718048018284004 1.0258574189742171 1.110646630149481 1.0216153450218106 0.8717195347252589 0.8346158054092091 0.8598549829915536 0.8320307113131317 0.8629919117863805 1.028419814002113 1.0 11.436185388356131 -6.569303563511891 3.898199348239335 0.9089479724989111 1.0927005093231001 0.6360882797564205 0.06829330704242795 0.12710693967843922 4.0691660880454945 0.010793209635672025 0.02397676823892415 2.695854423201081e-07 6.569303563511891 0.18375253682418902 SAS(ph)PDY(ph)NR ddPTM_A549_PD325901_60min_R1 1 SASPDYNR 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 S(0.392)AS(0.635)PDY(0.973)NR 61.582 0.039067000000000005 3430300.0 884.05 968.46 1008.6 834.41 1227.7 794.45 703.43 1041.2 1219.0 922.66 1184.2 True False 973.7981051967874 1050.0755230106663 1077.0496612045056 885.9496106173965 1141.4705873350724 787.9802625990583 730.1994135816659 1020.432449194402 1167.7696691866893 864.4030901378593 1038.550907262295 0.9376508155616549 1.0110968231482762 1.0370696839923779 0.8530632484379914 1.0990993116977599 0.7587305129569802 0.7030944833571339 0.9825540973088602 1.1244221742244929 0.832316532673874 1.0 10.020356220011536 -8.52515191123778 24.75929318060276 1.0584777295754524 0.9158615327520749 0.0 0.13164443632463552 71.13262161136156 774767.3184045894 0.020130584043106938 0.022898474037372975 2.984338548868328e-09 8.52515191123778 -0.14261619682337745 SAS(ph)PDYNR ddPTM_A549_MK2206_60min_R1 2 SASPDYNR 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.009)AS(0.991)PDYNR;S(0.002)AS(0.998)PDYNR 162.49 0.00017781 1058230000.0 5967.6 6944.8 5760.8 5621.0 8078.2 6474.0 6138.9 6273.3 9765.3 9536.3 9460.7 True False 6974.7849861878385 7298.260656360855 6577.768064500389 6998.145252336274 6889.907481126836 7159.0743829066 7254.258666791303 7162.559486175507 7553.475141979707 7382.043206752007 7111.347087963163 0.9807965916884478 1.026283848346267 0.9249679397078054 0.9840815201077027 0.9688610886099004 1.0067114281377463 1.0200962738930344 1.0072015045221216 1.0621721944587545 1.0380653785338407 1.0 12.795907157170886 -7.563505731497294 1.9586293767537797 1.028024237043697 0.9770457226237015 0.4268468909181412 0.02671178941261831 0.2741152469190799 2.1172460490252303 0.004887761145509543 0.00801176787582497 2.732085387598735e-08 7.563505731497294 -0.05097851441999546 SAS(ph)PDYNR ddPTM_A549_PD325901_60min_R1 2 SASPDYNR 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.338)AS(0.662)PDYNR;S(0.03)AS(0.97)PDYNR 152.38 0.00054515 1207250000.0 7822.0 7910.9 7920.6 7402.099999999999 8987.9 8715.5 7718.9 8073.700000000001 8465.8 9076.3 9592.3 True False 8616.083681747949 8577.579306305963 8458.139546437042 7859.3109056111825 8356.620910571724 8644.523857614817 8012.64696344415 7912.663719804879 8110.011866612523 8503.220869028955 8412.507910599657 1.0241991773810741 1.0196221385418631 1.0054242606749753 0.9342411310791812 0.9933566778632664 1.027579878614179 0.9524682827754982 0.9405832129839687 0.9640421088215568 1.010783105275301 1.0 13.038320241006442 -6.0122483664171575 22.87780386795217 0.9784672224285145 1.0195638349583052 0.2876258376028846 0.02769704540696485 182.58391177700204 341042.54430267453 0.0038595177881046968 0.01086738177427363 9.721910834552215e-07 6.0122483664171575 0.04109661252979069 SAS(ph)PERMD ddPTM_A549_MK2206_60min_R1 2 SASPERMD 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 1 S(0.004)AS(0.996)PERMD;S(0.049)AS(0.951)PERMD 69.27600000000001 0.0059342 21457000.0 2436.7 2658.2 1828.8000000000002 2108.69 2090.4300000000003 1654.22 1727.0500000000002 1888.3899999999999 2660.0 3143.8 3310.3 True False 2847.9553884047023 2793.4910259098074 2088.1513394595054 2625.319144662692 1782.9305161758768 1829.2684624176336 2040.832629702701 2156.0750654518315 2057.5142471471468 2433.613396536074 2488.2611503677795 1.144556465861213 1.122667942429159 0.8392010377009119 1.0550818366772534 0.7165367332574193 0.7351593550167582 0.8201842597594927 0.8664987053843408 0.8268883862302935 0.9780377739596874 1.0 11.280922193188792 -5.752755190598194 23.897401439817262 0.8862572931397813 1.133612513873554 0.4968970383088208 0.10100990625395162 76.58326486516685 210734.89536152256 0.015147360935089527 0.056737755241112235 1.767033607089067e-06 5.752755190598194 0.2473552207337727 SAS(ph)PERMD ddPTM_A549_PD325901_60min_R1 2 SASPERMD 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 1 S(0.081)AS(0.919)PERMD;S(0.008)AS(0.992)PERMD 89.82700000000001 0.0022018000000000003 29061000.0 2672.8199999999997 3337.3 2719.1 2904.3999999999996 3963.4 3843.5 3295.5 3387.9 3386.5 3143.1000000000004 3782.3 True False 2944.1627187739127 3618.545983255368 2903.6344772765897 3083.798191629012 3685.024456987724 3812.1998103083642 3420.9120558667937 3320.325676743867 3244.177181870977 2944.644129595199 3317.1010779751578 0.8875709993652361 1.0908760083561335 0.8753530293532814 0.9296666333458371 1.110917144326864 1.1492564503447171 1.031295693272936 1.0009721135090275 0.9780157751030321 0.8877161293477026 1.0 11.6957072589441 -5.224945536270214 22.810203778843746 1.0041680619601878 0.8875701583336627 0.14051559918590872 0.08372929521491362 8250.833275704152 5156817.327605136 0.010483740287755922 2.678558565566478 5.9573684863740525e-06 5.224945536270214 -0.11659790362652511 SAS(ph)PPKAK ddPTM_A549_MK2206_60min_R1 3 SASPPKAK 8 1 P52701;P52701-2;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 S(0.07)AS(0.93)PPKAK;S(0.007)AS(0.993)PPKAK;S(0.007)AS(0.993)PPKAK 85.355 0.00083466 1260968000.0 32885.87 33470.96 27246.870000000003 20200.68 40699.5 34306.5 31361.82 31653.23 43014.1 49913.3 50257.4 True False 38436.20087367204 35174.48889797086 31110.88587411362 25149.847506842976 34712.65746430164 37936.79105918835 37059.85674002653 36140.17228645134 33271.475029403045 38637.850863707616 37777.10054632321 1.0174470861399387 0.9311061036788423 0.8235382129437036 0.6657431921225297 0.9188809348069509 1.0042271775905438 0.9810137941789054 0.9566687692755927 0.8807313041032555 1.022784975684646 1.0 15.205224356342864 -6.987484709672576 24.994338980506768 0.9507936792365401 0.8532982802549226 0.24861833059951555 0.0880996937894841 297.43564463585335 594005.9306471752 0.013356341810914923 0.025230249218818303 1.02923676318344e-07 6.987484709672576 -0.09749539898161752 SAS(ph)PPKAK ddPTM_A549_PD325901_60min_R1 4 SASPPKAK 8 1 P52701;P52701-2;P52701-3;A0A087WWJ1;F8WAX8;F8W7G9 P52701 MSH6 DNA mismatch repair protein Msh6 1 S(0.034)AS(0.966)PPKAK;S(0.013)AS(0.987)PPKAK;S(0.059)AS(0.941)PPKAK;SAS(1)PPKAK 84.213 0.0011824000000000001 1676614000.0 42734.8 42534.3 37268.7 36549.3 39729.9 38419.6 30656.9 35042.4 38048.4 46197.7 54310.9 True False 47073.205436303004 46118.81473513885 39797.978096898994 38806.86725151713 36939.408884714256 38106.72351557778 31823.565105599395 34343.45184176899 36449.35806487515 43280.769337851205 47631.003605161124 0.9882891787567188 0.9682520048798967 0.835547754290582 0.81473965094685 0.7755328691145117 0.8000403231362665 0.6681271167284644 0.7210314551937692 0.7652443850863061 0.9086680116301697 1.0 15.539613326759362 -5.738053615755404 5.762588960868845 0.8398780375012546 0.9812414536947748 0.30832190785511393 0.08845903072576213 0.22915651099718365 22.651866341876744 0.016529119475193962 0.06276342229831908 1.8278745422551758e-06 5.738053615755404 0.14136341619352022 SAS(ph)PPPATSSSSSSR ddPTM_A549_PD325901_60min_R1 1 SASPPPATSSSSSSR 15 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 S(0.474)AS(0.526)PPPATSSSSSSR 67.726 0.0028815 1553700.0 440.02 218.2 244.34 222.81 278.92 407.43 196.3 314.51 283.0 389.17 256.35 True False 484.69050647439656 236.5884797729666 260.9223817357812 236.57246766177542 259.32962142176297 404.112025162986 203.77030391948165 308.2368513216778 271.1064941590098 364.59773978383214 224.82057513653888 2.155899237336407 1.0523435394170697 1.1605805277266852 1.0522723176831095 1.1534959434396337 1.797486839972539 0.9063685732310182 1.3710348847496643 1.2058793728926296 1.6217276357486554 1.0 7.8126302639862075 -5.257954486419357 24.39283761233655 1.1504346128813814 2.1558997791837027 0.47171519252218364 0.2686838591893275 116.89525065643122 818165.6766772716 0.030167842313951684 0.30390619717311956 5.521352994166535e-06 5.257954486419357 1.0054651663023213 SAS(ph)PPQKR ddPTM_A549_MK2206_60min_R1 2 SASPPQKR 8 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 S(0.197)AS(0.803)PPQKR;S(0.021)AS(0.979)PPQKR 55.06399999999999 0.009054099999999999 59015000.0 5620.0 5358.299999999999 4477.8 3369.9 5206.6 3506.8 3989.2 4606.7 6138.4 8172.2 8403.3 True False 6568.518604191914 5631.014582850245 5112.81937217398 4195.52565128056 4440.7160371413165 3877.8872483745563 4713.986002958812 5259.713832427068 4748.062201010541 6326.094344160607 6316.528690718533 1.0398937336964296 0.8914729685506569 0.8094349954725487 0.6642138200758019 0.7030310878927023 0.6139269586589069 0.7462937688996035 0.8326905631182612 0.7516885355064267 1.001514384547343 1.0 12.624916213864736 -10.708567877177035 0.8232804716106854 1.009388008444101 0.7753871049109965 0.36250903930217304 0.11018546482468668 0.6526655643616606 0.7349491310535928 0.09806610448336975 0.021804535217547247 1.9562849904370698e-11 10.708567877177035 -0.23400090353310443 SAS(ph)PPQKR ddPTM_A549_PD325901_60min_R1 2 SASPPQKR 8 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 S(0.004)AS(0.996)PPQKR;S(0.018)AS(0.982)PPQKR 63.076 0.004208600000000001 83985000.0 14039.099999999999 13093.8 12967.400000000001 11946.7 15171.8 10953.5 9510.400000000001 11283.0 12467.2 14434.7 16884.8 True False 15464.339096960828 14197.260478695103 13847.445743310835 12684.620526075734 14106.185107868589 10864.298327621344 9872.323476290567 11057.951713657725 11943.246939855855 13523.290578558695 14808.076641565956 1.044317872690688 0.9587511479271855 0.9351279088089907 0.8566014907344736 0.9526007630371677 0.7336738315579411 0.6666850608119602 0.7467513831349502 0.8065360025441396 0.91323747883632 1.0 13.854096646788523 -5.574017197309284 1.1569904335322303 0.8650807026235829 1.0713890328168794 0.29880342562343465 0.09688000386688253 1.3877616722048014 2.1547606326735647 0.018212460116534792 0.3002082176873768 2.666753063628192e-06 5.574017197309284 0.20630833019329642 SAS(ph)PQPAFHLKPDT(ph)PVSVK ddPTM_A549_MK2206_60min_R1 1 SASPQPAFHLKPDTPVSVK 19 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 2 S(0.113)AS(0.887)PQPAFHLKPDT(0.81)PVS(0.19)VK 117.73 2.4211e-13 7706500.0 993.11 1043.4 1032.4 925.39 1358.7 1064.3 940.99 1399.5 1803.9 1601.8 1527.0 True False 1160.7226887916427 1096.5046032782682 1178.8098440824551 1152.1105915423354 1158.8370298590069 1176.9235195748374 1111.9557026281493 1597.883410788999 1395.3195302363667 1239.9522675015853 1147.8037569439625 1.0112553489823704 0.9553066860468563 1.0270134044699823 1.003752239502892 1.009612508103668 1.0253699837230073 0.9687681329679048 1.3921224783610897 1.2156429370395312 1.0802824611787027 1.0 10.164660286357597 SAS(ph)PQPAFHLKPDT(ph)PVSVK ddPTM_A549_PD325901_60min_R1 3 SASPQPAFHLKPDTPVSVK 19 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 2 S(0.112)AS(0.888)PQPAFHLKPDT(0.81)PVS(0.19)VK;S(0.132)AS(0.868)PQPAFHLKPDT(0.55)PVS(0.451)VK;S(0.444)AS(0.556)PQPAFHLKPDT(0.955)PVS(0.045)VK 118.43 2.2408000000000002e-13 34381400.0 4496.61 4464.91 4886.5 6139.4 5776.02 4858.969999999999 4422.15 5073.1 5489.74 5740.700000000001 6248.1 True False 4953.102536970675 4841.1836353030085 5218.127274911571 6518.616794410952 5370.332281387254 4819.400159306369 4590.437338143332 4971.913040730042 5259.025318885095 5378.231222286012 5479.623309969219 0.9039129620387168 0.8834884008350208 0.9522784650941422 1.1896103848144937 0.9800550106458724 0.879513040711815 0.8377286317823768 0.9073457716855304 0.9597421248495704 0.9814965223067903 1.0 12.41986100494309 -9.838049271940198 1.244801869449882 0.9925223482405257 0.9452865688782903 0.04040342510238015 0.08751330284328473 1.1213694438681983 3.5116960498179153 0.027211867303458006 0.01763123855045901 1.451946880753093e-10 9.838049271940198 -0.04723577936223533 SAS(ph)PQPAFHLKPDT(ph)PVSVKK ddPTM_A549_PD325901_60min_R1 4 SASPQPAFHLKPDTPVSVKK 20 2 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 2 S(0.381)AS(0.619)PQPAFHLKPDT(0.891)PVS(0.109)VKK;S(0.467)AS(0.533)PQPAFHLKPDT(0.997)PVS(0.003)VKK;S(0.335)AS(0.665)PQPAFHLKPDT(0.885)PVS(0.115)VKK;S(0.156)AS(0.844)PQPAFHLKPDT(0.844)PVS(0.156)VKK 104.87 4.8382e-10 28505800.0 7921.8 7731.4 9470.6 8637.3 10524.599999999999 9944.2 9673.5 10067.400000000001 10728.4 9614.1 9471.3 True False 8726.015304279064 8382.952211350655 10113.331867344228 9170.806404268453 9785.388403898918 9863.217732189005 10041.63033604231 9866.597809277484 10277.522657015978 9007.064085247435 8306.390143517461 1.0505183543646923 1.0092172491913283 1.2175363416124818 1.1040664170374428 1.1780554771480014 1.1874252908631477 1.2089042487221815 1.1878322157763865 1.2373031460648214 1.084353603626095 1.0 13.02000592007748 -5.741447044296903 24.980014348939868 1.1398200084884837 1.0298677296039056 0.31679170616367247 0.068161704324578 328.46362781447334 410401.98768459616 0.012926244812767237 0.04992463374188914 1.8136478095569614e-06 5.741447044296903 -0.10995227888457815 SAS(ph)PQPAFHLKPDTPVS(ph)VK ddPTM_A549_MK2206_60min_R1 1 SASPQPAFHLKPDTPVSVK 19 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 2 S(0.471)AS(0.529)PQPAFHLKPDT(0.471)PVS(0.529)VK 88.001 1.8724000000000002e-05 8126800.0 946.06 863.64 940.46 959.97 1067.5 1033.3 769.14 931.55 1334.3 1183.2 1531.9 True False 1105.731799053702 907.5955870953068 1073.8313695910367 1195.1626930946902 910.4721641086987 1142.6431201509722 908.88278209058 1063.6000652522264 1032.0831804392615 915.9142982319121 1151.4869517108423 0.9602642890662731 0.7881944174415788 0.9325606060889987 1.0379298621829418 0.7906925586572635 0.9923196424008711 0.7893122720497971 0.9236753084105414 0.896304711838745 0.7954187382419541 1.0 10.169282347717537 -10.605056382937764 0.7728832866834604 1.0036831345394124 0.8992201456740866 0.0 0.09988537438833817 0.9359209497509743 0.945045918641894 0.059088174066625 0.014101701430636184 2.4828107497112923e-11 10.605056382937764 -0.10446298886532579 SAS(ph)PSVPGPTKPK ddPTM_A549_PD325901_60min_R1 1 SASPSVPGPTKPK 13 1 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.07)AS(0.515)PS(0.392)VPGPT(0.022)KPK 59.261 0.0027155 12081000.0 2796.0 3266.0 2925.6 2840.6 3973.0 3541.2 2727.0 3600.8 3031.8 3427.9 3659.6 True False 3079.8478616935877 3541.2372820279975 3124.1488090619655 3016.0574105293285 3693.9501861059234 3512.3616412811184 2830.7774772716593 3528.9792192270465 2904.383989368501 3211.461808990927 3209.4924001157706 0.9596059057757836 1.1033636602162573 0.9734090066545331 0.9397303481449388 1.1509452977588226 1.0943667108089812 0.882001614077525 1.0995443451119409 0.9049356182503301 1.0006136200462992 1.0 11.64812942944195 -8.774018135831032 24.99470285218925 0.955108492615526 1.025090584244525 0.08126068675820852 0.08181574758813023 339.11469242773376 673838.1811802743 0.014048475298629981 0.015005536018041951 1.6826037952564736e-09 8.774018135831032 0.06998209162899904 SAS(ph)PSVPGPTKPKPK ddPTM_A549_MK2206_60min_R1 3 SASPSVPGPTKPKPK 15 2 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.108)AS(0.708)PS(0.185)VPGPTKPKPK;S(0.121)AS(0.714)PS(0.164)VPGPT(0.001)KPKPK;S(0.191)AS(0.764)PS(0.045)VPGPTKPKPK 99.413 1.9921e-06 100419300.0 16479.7 16734.6 18390.1 15721.100000000002 21602.300000000003 17339.9 16561.47 17007.0 24987.7 23116.699999999997 24303.3 True False 19261.070470018065 17586.319660744215 20998.092709861245 19572.770205746994 18424.630286393764 19174.796708705933 19570.474723859992 19417.794331753117 19328.02584715743 17894.621414754583 18268.119873042713 1.0543542851632255 0.9626781400036358 1.149439179061169 1.0714167819004452 1.0085674067412929 1.0496316447431 1.0712911268301395 1.0629333761054918 1.0580194339363167 0.9795546306415867 1.0 14.157040541187904 -10.642134290459765 0.8458045051297824 0.9988895896237701 1.0541974325940278 0.23612543492065463 0.04349461392548182 0.8885215851782315 1.0986217698891003 0.03120085802130831 0.007766528800939921 2.2796370645510902e-11 10.642134290459765 0.0553078429702577 SAS(ph)PSVPGPTKPKPK ddPTM_A549_PD325901_60min_R1 3 SASPSVPGPTKPKPK 15 2 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.09)AS(0.745)PS(0.165)VPGPTKPKPK;S(0.083)AS(0.788)PS(0.129)VPGPTKPKPK;S(0.115)AS(0.874)PS(0.01)VPGPTKPKPK 101.96 2.2427e-06 198036400.0 6847.2 6235.0 7609.7 6351.5 8213.0 8024.6 7270.4 7672.800000000001 8056.5 7658.000000000001 8004.699999999999 True False 7542.322703357779 6760.445331734403 8126.140002843469 6743.817729696905 7636.14721331185 7959.250318147648 7547.079050515535 7519.759984804848 7717.913322233435 7174.472573077546 7020.172645974069 1.0743785208307024 0.96300271697896 1.1575413330473645 0.9606341709508173 1.0877435069479422 1.1337684583458387 1.0750560464981778 1.0711645374016951 1.0993908143640179 1.0219795060441947 1.0 12.777290795594752 -3.340573559824479 10.935051905486104 1.0559969930817705 1.1112146443120121 0.0 0.0619505352738832 0.0 0.0 0.007953263463977138 0.0 0.00045648492526189445 3.340573559824479 0.05521765123024158 SAS(ph)PTVPR ddPTM_A549_MK2206_60min_R1 1 SASPTVPR 8 0 Q92817;K7EKI0;K7EQ87 Q92817 EVPL Envoplakin 1 S(0.016)AS(0.814)PT(0.17)VPR 83.62299999999999 0.0033155999999999997 69901000.0 2167.2 2809.3 2753.0 2095.3 3181.2 2368.0 2023.6 2459.3 3346.4 3383.4 4172.4 True False 2532.970377047103 2952.2813705095255 3143.416796550752 2608.648594061592 2713.2496941101563 2618.5801882488154 2391.2619260973265 2807.9133062903798 2588.4457431027104 2619.087590126649 3136.2779276182 0.8076358140143306 0.941332827843989 1.002276223312254 0.831765760007976 0.8651177468097331 0.8349324417933386 0.7624521746111115 0.8953011726300698 0.8253240952623313 0.8350942265233734 1.0 11.614837697122168 -10.849288691043352 1.0515460238167365 1.001395472941782 0.8630415547276754 0.0 0.07871149599300174 0.4585049971648541 0.8849409231404407 0.047550065192370226 0.011141937316447852 1.4148529640293613e-11 10.849288691043352 -0.13835391821410659 SAS(ph)PTVPR ddPTM_A549_PD325901_60min_R1 1 SASPTVPR 8 0 Q92817;K7EKI0;K7EQ87 Q92817 EVPL Envoplakin 1 S(0.001)AS(0.728)PT(0.271)VPR 99.139 0.0024171999999999996 73617000.0 3860.1 3970.7 3717.0 3917.7 4402.8 4177.0 4600.2 4088.3 4001.7 4350.4 5696.6 True False 4251.974510344572 4305.324824172861 3969.2579721367706 4159.687431257744 4093.562516835433 4142.983896879938 4775.263128326027 4006.755649290697 3833.522465286606 4075.7150015560933 4995.9543137226765 0.8510835454730696 0.8617622487754093 0.7944944494856929 0.8326111829790136 0.819375490602748 0.8292677708241175 0.9558260201078173 0.802000057983939 0.7673253645968795 0.8158030969901169 1.0 12.286544568720227 -10.926604511846614 1.159745566788835 1.000828453842411 0.8305244213919127 0.0 0.07035927812423348 0.2598376193167846 0.6160288362178251 0.03564128586487215 0.008235180264701554 1.1841193774343233e-11 10.926604511846614 -0.1703040324504983 SAS(ph)PY(ph)PSHSLS(ph)SPQR ddPTM_A549_PD325901_60min_R1 1 SASPYPSHSLSSPQR 15 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 S(0.563)AS(0.734)PY(0.698)PS(0.006)HS(0.168)LS(0.491)S(0.339)PQR 72.64399999999999 0.0010053 9445400.0 659.32 944.43 637.02 748.82 964.46 740.53 610.31 681.67 765.68 644.53 714.94 True False 726.2536810342691 1024.020430577373 680.2520079124467 795.0729107063898 896.7196568063733 734.4993692019393 633.5356810244467 668.0735570902299 733.501132323924 603.8342658038221 627.0069123780661 1.158286562232284 1.6331884232241443 1.0849194713538908 1.2680448891558393 1.4301591244111813 1.1714374350614154 1.0104125943709596 1.065496318942337 1.169845368278245 0.963042438421681 1.0 9.292337537743963 -7.491826542820266 5.889096465442448 1.0764989726349592 1.316635621037586 0.4436725931982243 0.1434158417922651 0.14494331657627546 15.266410501363131 0.020504186389918248 0.03230735655510627 3.222355542836289e-08 7.491826542820266 0.24013664840262683 SAS(ph)QDCIETTPGAQEGKK ddPTM_A549_MK2206_60min_R1 1 SASQDCIETTPGAQEGKK 18 1 Q99767-2;Q99767 Q99767-2 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 1 S(0.133)AS(0.867)QDCIETTPGAQEGKK 114.84 2.389e-10 5920200.0 946.59 1699.7 1509.6 1333.9 2768.4 1866.7 2166.2 2359.0 3315.8 3217.4 2845.1 True False 1106.3512500964453 1786.2074699943187 1723.6839796850768 1660.7055598810466 2361.1720272773055 2064.2329549848237 2559.7705002530297 2693.39547413451 2564.7765942445526 2490.587105418655 2138.583149234623 0.5173290785969192 0.8352293763436713 0.8059934355612808 0.7765447700620836 1.1040824052702112 0.9652339006428586 1.19694691374013 1.2594298590159794 1.1992877598247513 1.164596806212567 1.0 11.062439585706766 -6.410414552324532 0.8843857257840204 1.115856279933897 0.6336310621018774 0.7524846891370254 0.10918837477410451 0.331511157387639 0.42997123351873084 0.01972006767291308 0.1049091685728406 3.8867396224536975e-07 6.410414552324532 -0.48222521783201955 SAS(ph)QS(ph)SLDKLDQELK ddPTM_A549_PD325901_60min_R1 2 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.074)AS(0.765)QS(0.664)S(0.497)LDKLDQELK;S(0.081)AS(0.89)QS(0.647)S(0.382)LDKLDQELK 85.80799999999999 2.7804e-05 44952000.0 4850.4 4842.6 4564.4 4238.0 4746.6 3950.9 4291.0 5361.6 5517.0 6683.7 6451.6 True False 5342.809037324246 5250.702897106176 4874.167631966927 4499.771634803665 4413.215190881046 3918.72518031672 4454.296353125296 5254.658681906169 5285.139675884299 6261.69004135262 5658.094100062003 0.944277161679884 0.9279985104964298 0.8614504364488237 0.7952804522558851 0.7799826430657426 0.6925874881214467 0.7872432438118137 0.9286976478260739 0.9340847964734951 1.1066783143963623 1.0 12.466100455133244 -8.453583575888858 3.3438916872285773 0.9682642210097325 0.8243485443997124 0.49499636031689764 0.07965646398828305 0.18048881538014358 3.9551008538576093 0.013060180898080026 0.015661891073835896 3.5189769660596446e-09 8.453583575888858 -0.14391567661002014 SAS(ph)QSS(ph)LDKLDQELKEQQK ddPTM_A549_PD325901_60min_R1 1 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.093)AS(0.896)QS(0.157)S(0.854)LDKLDQELKEQQK 86.08 2.8843e-05 21851000.0 4561.7 4159.3 4397.2 4350.6 4676.6 5359.8 5133.5 5587.4 5386.5 6768.8 7501.6 True False 5024.80042585395 4509.8188080646205 4695.62043451165 4619.326681070509 4348.131749394155 5316.151565836027 5328.858151658988 5475.954923769495 5160.124137058328 6341.416812829367 6578.950756560407 0.7637692713907781 0.6854921057993196 0.7137339384748039 0.7021372939239897 0.660915685538196 0.808054621861223 0.8099860219116476 0.8323447197577781 0.7843384649007669 0.9638948591469276 1.0 12.683641798864278 -13.620727127757263 0.16017980628691256 1.6126610305160722 0.6641512265903458 0.8342005694487535 0.04227842637779191 9.727975620309266 0.1502452729579513 2.0101384783467307 0.07496028751306585 2.394819976868147e-14 13.620727127757263 -0.9485098039257265 SAS(ph)QSSLDKLDQELK ddPTM_A549_MK2206_60min_R1 4 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.018)AS(0.982)QSSLDKLDQELK;S(0.004)AS(0.995)QSSLDKLDQELK;S(0.008)AS(0.989)QS(0.001)S(0.001)LDKLDQELK;S(0.001)AS(0.982)QS(0.006)S(0.01)LDKLDQELK 140.2 2.6243999999999997e-11 52193800.0 15630.5 15805.999999999998 14164.099999999999 11448.999999999998 17561.3 14671.4 14598.5 16554.600000000002 19230.3 17660.6 18483.899999999998 True False 18268.546270964718 16610.45788711549 16172.782363975493 14254.005513965132 14978.05603331344 16223.917809912882 17250.85848395525 18901.26524633624 14874.66775447886 13671.058194180614 13893.837500312062 1.3148668444232487 1.1955270015747927 1.164025587863126 1.0259228606671829 1.0780359301724254 1.1677060286294902 1.2416194218168874 1.3604063849106993 1.0705946254333814 0.983965603014542 1.0 13.762157508604236 -8.975376921518874 18.894355134479678 1.0311424025172873 1.1858806831654796 0.42504326762131517 0.09121252336176981 9.25016105911935 7098.634546225134 0.01710970447259298 0.01774128996505341 1.0583348041824393e-09 8.975376921518874 0.15473828064819228 SAS(ph)QSSLDKLDQELK ddPTM_A549_PD325901_60min_R1 2 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.003)AS(0.983)QS(0.01)S(0.004)LDKLDQELK;S(0.006)AS(0.987)QS(0.006)S(0.001)LDKLDQELK 147.9 2.5808999999999996e-14 62737000.0 5767.5 5441.7 5574.700000000001 5395.700000000001 6901.5 4987.5 5639.5 5692.8 6672.0 8289.599999999999 7898.9 True False 6353.012354190904 5900.291156647812 5953.03266539436 5728.980134476196 6416.762448882464 4946.883453600354 5854.114258552808 5579.252638084797 6391.59904250499 7766.193241288017 6927.385375252616 0.9170866077245247 0.8517342167401292 0.8593476965582091 0.8270046812961206 0.9262892276508392 0.7141054215451323 0.8450683687190321 0.8053908272544087 0.9226567739883986 1.1210857806513779 1.0 12.758095218853406 -9.207293988862451 1.4115156221977907 0.9774605427981359 0.8425104206590848 0.5250355640289707 0.07049915969411323 0.20381654659722367 0.8401546443758475 0.012171415203549463 0.010885976095542062 6.204488888616312e-10 9.207293988862451 -0.1349501221390511 SAS(ph)QSSLDKLDQELKEQQK ddPTM_A549_MK2206_60min_R1 4 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.103)AS(0.668)QS(0.115)S(0.115)LDKLDQELKEQQK;S(0.005)AS(0.774)QS(0.11)S(0.11)LDKLDQELKEQQK;S(0.018)AS(0.982)QSSLDKLDQELKEQQK;S(0.465)AS(0.532)QS(0.002)S(0.002)LDKLDQELKEQQK 135.68 2.6705e-17 168863000.0 10355.3 12163.1 11524.5 10499.8 14171.3 10088.8 9981.900000000001 9760.5 14937.0 14211.4 15839.2 True False 12103.021477222155 12782.149837199442 13158.847392607755 13072.251471353939 12086.720542607594 11156.390119596559 11795.482022193577 11144.08076527762 11553.793349487567 11001.034869754045 11905.889500318797 1.016557517764471 1.0735988971556625 1.1052384949696876 1.0979651265034762 1.015188368939923 0.9370480147071607 0.990726650190877 0.9360141268721855 0.9704267244524819 0.923999409658512 1.0 13.539387789301767 -6.943322331643736 4.8867000947222685 0.9787172689261621 1.074931658741064 0.7037797472163652 0.033220827919145296 0.08723287346657324 4.347530390110172 0.0043872902131674605 0.008383869175142809 1.1394038126651049e-07 6.943322331643736 0.09621438981490193 SAS(ph)QSSLDKLDQELKEQQK ddPTM_A549_PD325901_60min_R1 3 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.069)AS(0.921)QS(0.005)S(0.005)LDKLDQELKEQQK;S(0.069)AS(0.93)QS(0.001)SLDKLDQELKEQQK;S(0.087)AS(0.912)QS(0.001)SLDKLDQELKEQQK 190.57 2.5296999999999997e-44 177891000.0 9236.4 9543.3 10550.1 9684.9 11631.699999999999 12619.0 12373.5 10783.5 13036.9 14101.1 15231.8 True False 10174.0725285217 10347.547383214263 11266.093228905065 10283.11427699623 10814.729519186574 12516.235047816122 12844.380313539006 10568.414633007897 12489.004430040974 13210.754139491217 13358.385162335602 0.7616244332591805 0.7746106477293009 0.8433723905992903 0.7697872274254977 0.8095835977000463 0.9369571917349749 0.9615219322882044 0.7911446259841258 0.9349187254499985 0.9889484379249196 1.0 13.705457996710262 -5.41626568542321 0.13147173916106542 1.069761842131012 0.4854040938100071 0.6648730405332793 0.052243176715059556 11.287050699879652 0.2462255714869265 0.20538373349830572 1.1991684725406377 3.8347257927090516e-06 5.41626568542321 -0.584357748321005 SAS(ph)SDTSEELNSQDSPPK ddPTM_A549_MK2206_60min_R1 1 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 S(0.004)AS(0.443)S(0.443)DT(0.109)SEELNSQDSPPK 212.9 1.6601999999999998e-55 26150000.0 1840.1 1951.9 2102.0 1550.7 2247.0 1904.8 1828.0 2410.0 2502.0 2182.3 2162.3 True False 2150.663893874295 2051.243372761022 2400.095207537116 1930.6215696135687 1916.4692765829022 2106.3646716960925 2160.1239379847375 2751.6248803154613 1935.3009948729934 1689.316914326827 1625.341233555946 1.3232076129447845 1.2620385986721574 1.476671580087925 1.18782538076003 1.179118105796173 1.2959522764876616 1.3290279563379968 1.6929521158430312 1.1907044225038903 1.0393613842127871 1.0 10.666526922358624 -9.381150608628396 1.800581531588773 1.0567448368160985 1.332197784389997 0.41600171203680825 0.1412955994260702 0.22467284473952304 1.4901953760283635 0.031926979549946055 0.027410754665876825 4.157664021997494e-10 9.381150608628396 0.2754529475738985 SAS(ph)SDTSEELNSQDSPPK ddPTM_A549_PD325901_60min_R1 2 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 S(0.001)AS(0.675)S(0.313)DT(0.012)SEELNSQDSPPK;S(0.004)AS(0.939)S(0.058)DTSEELNSQDSPPK 368.44 7.513799999999997e-247 64208000.0 8238.2 8222.1 7957.7 8458.1 10983.3 7175.4 8160.4 9050.599999999999 7883.0 9048.2 8803.099999999999 True False 9074.535999357695 8915.00522246246 8497.757375537465 8980.537627261183 10211.870898328016 7116.9659213962905 8470.94848754222 8870.078682941652 7551.704923870936 8476.895107824528 7720.374507448668 1.1754010107414508 1.1547374047542907 1.1006923779848727 1.1632256464497546 1.322717037687166 0.9218420576009357 1.0972198925543566 1.1489181871143352 0.978152668187923 1.0979901427898302 1.0 12.914455117509595 -8.053562373015316 0.7289290530524035 0.988580022665932 1.165756503714101 0.1796787718392555 0.0949675462683272 0.45947983011488325 0.4949741665971648 0.019376799967241252 0.03005921470687269 8.839702050116595e-09 8.053562373015316 0.17717648104816885 SAS(ph)SEEASESPTAR ddPTM_A549_PD325901_60min_R1 1 SASSEEASESPTAR 14 0 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 S(0.003)AS(0.978)S(0.017)EEAS(0.003)ESPTAR 59.898 0.0072661 811880.0 466.33 579.67 319.74 561.76 513.58 304.94 143.77 539.3 559.6 325.05 236.0 True False 513.6714783059984 628.5208252520416 341.4394791528142 596.4586393504732 477.5079125548152 302.45666974253476 149.2412460239627 528.5432384273341 536.0819580614199 304.52628752662014 206.9734961272604 2.4818224937851983 3.0367213049616133 1.6496773043002357 2.8818116836743806 2.307096906075419 1.4613304379637346 0.7210645266976586 2.553675945553687 2.5900995445900126 1.471329871817878 1.0 7.693302225838116 -10.899647613308362 1.0874699272303723 0.9827031110138678 2.1990383676829124 0.22846148865976212 0.657287445078681 0.5358426248128554 1.0990918799923501 0.5061876727187219 0.11400682658323051 1.2599473188370745e-11 10.899647613308362 1.2163352566690446 SAS(ph)SGAEGDVS(ph)SEREP ddPTM_A549_MK2206_60min_R1 1 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 2 S(0.301)AS(0.35)S(0.35)GAEGDVS(0.538)S(0.462)EREP 53.828 0.0475 9092200.0 438.83 0.0 115.18 127.61 334.06 354.16 273.67 311.53 477.34 499.11 672.23 True False 512.8937756365727 0.0 131.51425594867996 158.87445572863055 284.9202165266063 391.6369761276187 323.39229655814177 355.6903315206123 369.2232521553455 386.36070435305066 505.29673839583506 1.015034803638068 0.0 0.2602713335656947 0.3144181302911416 0.5638671198059623 0.7750633367849319 0.6400047179897003 0.7039236640430768 0.7307057894882086 0.7646214095496233 1.0 8.980987057410502 -8.29751951042578 0.3505518498894958 0.9866813889539534 0.3340682484479549 0.2811780804031787 0.2524418475120729 0.8563523624561785 0.28266952348667485 0.14005287609615916 0.1929010824694946 5.040579740841234e-09 8.29751951042578 -0.6526131405059985 SAS(ph)SGAEGDVS(ph)SEREP ddPTM_A549_PD325901_60min_R1 1 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 2 S(0.045)AS(0.478)S(0.478)GAEGDVS(0.539)S(0.461)EREP 69.594 0.0051833999999999995 11739000.0 246.37 312.09 354.69 289.66 180.48 318.75 229.29 260.28 295.35 311.32 314.83 True False 271.381301031992 338.3909195799503 378.76139632423764 307.5516403344099 167.80370742219912 316.15420568122573 238.0157564223023 255.0885112142901 282.9374666072916 291.66320206979634 276.1079058718023 0.9828813129240679 1.2255749016367037 1.371787581120903 1.1138820504372193 0.6077468404693593 1.1450385844004665 0.8620389034887458 0.9238725360248411 1.024735114751333 1.0563377428432505 1.0 8.109088387366587 -6.530179513204669 24.99987399494089 0.9761833672267801 1.20433137845538 0.32757293533215626 0.1557694003696652 150.21839024272518 514389.5477143731 0.020647889300631658 0.043050932816731634 2.9499896128511836e-07 6.530179513204669 0.22814801122859985 SAS(ph)SGAEGDVSSER ddPTM_A549_MK2206_60min_R1 1 SASSGAEGDVSSER 14 0 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 S(0.038)AS(0.481)S(0.481)GAEGDVSSER 251.02 1.5372999999999998e-69 17140000.0 2612.1 2947.0 2531.8 2212.8 4388.9 3183.1 3372.9 3852.9 5189.7 3056.5 3973.1 True False 3052.9586202864252 3096.9897123452724 2890.8473103912825 2754.9360993363657 3743.2986239406728 3519.933529229225 3985.7122704752283 4399.060374011384 4014.2412362479513 2366.0345271685574 2986.469618018375 1.0222634115769669 1.0370069374421533 0.9679814899002585 0.9224725015499606 1.253419288566036 1.1786269339531474 1.3345899273269302 1.4729968614012927 1.3441426666551988 0.7922513300967389 1.0 11.54422532967716 -6.765132684708267 24.99872068986122 1.209609252071524 0.989582950180074 0.24888042988258174 0.17382929790335944 94.96806140323487 642812.7554724853 0.023985362851958122 0.046602500785968566 1.717383615680333e-07 6.765132684708267 -0.22002630189145 SAS(ph)SGAEGDVSSEREP ddPTM_A549_MK2206_60min_R1 2 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SAS(0.5)S(0.5)GAEGDVSSEREP;SAS(0.5)S(0.5)GAEGDVSSEREP 328.87 1.3694999999999995e-186 394770000.0 5124.700000000001 6275.8 5240.3 4886.4 6574.0 6100.1 4640.8 5411.9 6601.4 7029.9 7995.200000000001 True False 5989.624073114287 6595.211413890886 5983.453337800547 6083.568219358834 5606.973308525143 6745.6085330813385 5483.973288511801 6179.0533982486495 5106.193440269611 5441.84070752241 6009.771183705547 0.9966476077082793 1.097414728829054 0.9956208239714092 1.0122795083868374 0.9329761711606391 1.1224401606788104 0.912509498428267 1.0281678302498574 0.8496485613485867 0.9054988187032842 1.0 12.55309434740927 -7.807739287844828 24.999449056879428 0.93508801465293 1.023201737965197 0.305678093629817 0.06511828445759126 130.7973182264101 70623.01184559945 0.011381171112897714 0.01572538261173341 1.5568999767452496e-08 7.807739287844828 0.08811372331226697 SAS(ph)SGAEGDVSSEREP ddPTM_A549_PD325901_60min_R1 1 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SAS(0.5)S(0.5)GAEGDVSSEREP 302.15 3.186299999999999e-143 239560000.0 3354.2 3475.9 3920.0 3366.1 4346.2 4153.3 3763.4 3526.9 4123.7 4170.8 3866.3 True False 3694.715914768465 3768.8262916721087 4186.034772874937 3574.016352032234 4040.9379055760323 4119.476901822226 3906.6182464114986 3456.553212700473 3950.395229553036 3907.454976206819 3390.7696104950287 1.0896393265212325 1.1114958326885225 1.234538247576132 1.054042816996479 1.1917465265315044 1.2149091135746055 1.1521332013593102 1.0194007879514528 1.1650438346875198 1.1523799682858304 1.0 11.727397046882093 -11.059909401818507 0.6070843237683616 0.9627076517615027 1.1425128296597409 0.0 0.07747492967961714 1.1741409648777017 0.5049058265960265 0.12391159078278843 0.01268025273321356 8.711453006425571e-12 11.059909401818507 0.17980517789823813 SAS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 SASSPR 6 0 Q9UQ35;Q9UQ35-2;Q9Y566-3;H9KV90;Q9Y566;O75179-4;O75179-6;O75179-2;O75179;A0A1W2PQ15;O75179-5;O75179-3;H0YLQ3;O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 Q9UQ35;O75179-4;O14974-5 SRRM2;SHANK1;ANKRD17;PPP1R12A Serine/arginine repetitive matrix protein 2;SH3 and multiple ankyrin repeat domains protein 1;Ankyrin repeat domain-containing protein 17;Protein phosphatase 1 regulatory subunit 12A 1 S(0.01)AS(0.811)S(0.178)PR 77.923 0.044334 35887000.0 1366.9 1509.4 1664.6 1986.7 1848.8 1514.8 1131.4 1731.6 1307.4 2107.7 2234.9 True False 1505.6666817414048 1636.6024352397603 1777.5697660529624 2109.4139468769317 1718.946666013751 1502.4639710303402 1174.4560461258352 1697.0618795860794 1252.454524605969 1974.619462297667 1960.0214681983641 0.7681888725052596 0.8349920966652024 0.9069134164570607 1.0762198175389823 0.8770039991418016 0.7665548543258524 0.5992057052341297 0.8658384140792116 0.6390004114379497 1.0074478745953335 1.0 10.93665374098915 -5.2607020967200615 18.235614992226832 0.8339676386637936 0.7681885104437081 0.0079004638928718 0.14212930633307116 7.784462984066597 190205.9558437312 0.022041684319337368 0.1807170601694742 5.48653183235618e-06 5.2607020967200615 -0.06577912822008558 SAS(ph)SPSPR ddPTM_A549_MK2206_60min_R1 1 SASSPSPR 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 SAS(0.699)S(0.301)PSPR 136.99 0.0010867000000000001 81000000.0 1637.6 1867.8 1313.9 1080.3 1721.8 1496.8 1054.6 1486.1 2324.4 2375.0 2268.3 True False 1913.9868445239651 1962.8630419811661 1500.2307769662316 1344.9735484965095 1468.5255008546685 1655.1903825045733 1246.2071690364903 1696.7592259903763 1797.9271113040697 1838.4858504908632 1705.018508104775 1.1225607437255742 1.1512268240202272 0.8798911975646665 0.7888322279806358 0.8612959295597431 0.970775610139512 0.7309053615035067 0.9951558988508697 1.054491257870607 1.0782791164738996 1.0 10.735571684560245 -8.508222284223548 24.733344245074306 1.0256841822107474 0.9248052451253032 0.14726231132849543 0.12018150141679615 966.1693504791891 1630450.4214677452 0.02072026491452161 0.024583171117597603 3.1029709931279845e-09 8.508222284223548 -0.10087893708544426 SAS(ph)SSWLEGTSTQAK ddPTM_A549_MK2206_60min_R1 2 SASSSWLEGTSTQAK 15 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 SAS(0.875)S(0.062)S(0.062)WLEGTSTQAK;SAS(0.907)S(0.077)S(0.015)WLEGTSTQAK 264.92 1.6760999999999996e-90 18744800.0 6846.799999999999 6619.6 5888.4 5337.0 10174.0 6927.3 7818.400000000001 7450.6 10735.0 11217.2 9956.599999999999 True False 8002.372451811604 6956.509365402363 6723.463663207215 6644.565239587033 8677.418077416305 7660.342288030418 9238.902076991171 8506.745366505547 8303.539640272407 8683.226729316257 7484.101431819425 1.0692495985942543 0.9295049551073761 0.8983661865700697 0.8878240494359125 1.1594468830317255 1.0235486995755678 1.234470451951791 1.1366421799600748 1.1094905268078086 1.160223015203753 1.0 12.869613396179217 -6.754122382226376 24.999372473650602 1.0774579905174932 0.9416218186693702 0.46532836331615623 0.08138623002883073 144.6804139536014 494313.4602830529 0.012233619560260017 0.025065185831265324 1.7614795994596275e-07 6.754122382226376 -0.13583617184812302 SAS(ph)SSWLEGTSTQAK ddPTM_A549_PD325901_60min_R1 1 SASSSWLEGTSTQAK 15 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 SAS(0.485)S(0.485)S(0.03)WLEGTSTQAK 330.04 8.878199999999998e-186 22605000.0 6517.7 5730.4 5496.3 4964.4 6087.7 5457.0 5011.9 5207.9 7164.9 6647.9 7560.3 True False 7179.372105922857 6213.320918840547 5869.311969936862 5271.039713029566 5660.12095342488 5412.560001262587 5202.630597116912 5104.024348981485 6863.784169610918 6228.1504594622875 6630.431028690364 1.0827911601609586 0.9370915543733205 0.8852082081149651 0.7949769313972785 0.8536580697292709 0.8163209869527398 0.7846594851231762 0.7697877146894365 1.0351942641301626 0.9393281420940239 1.0 12.69488694425204 -8.77923631745727 24.995372338197097 1.0166195327864336 0.8615132492070529 0.28269127566965435 0.08669898976977276 175.09065047801727 245909.6971263324 0.015089285041600885 0.016080240820648795 1.6625077654716583e-09 8.77923631745727 -0.15510628357938072 SAS(ph)TDLGTADVVLGR ddPTM_A549_MK2206_60min_R1 2 SASTDLGTADVVLGR 15 0 H7C0E9;B5MCU0;A0A0U1RRA6;B5MCG9;Q9Y2K5-3;Q9Y2K5-2;Q9Y2K5 H7C0E9 R3HDM2 R3H domain-containing protein 2 1 S(0.021)AS(0.957)T(0.021)DLGTADVVLGR;S(0.009)AS(0.806)T(0.185)DLGTADVVLGR 93.478 2.4473e-05 15306300.0 1808.24 2666.9 1706.75 1459.75 2546.8999999999996 2410.6 1297.54 2040.29 2939.9 3136.4 2873.3 True False 2113.4267047765106 2802.633818749103 1948.7928142074088 1817.3888155306672 2172.2543838580273 2665.6880919732257 1533.2862223701945 2329.507355626071 2274.017344055599 2427.8850616755963 2159.780310954215 0.9785378142662923 1.2976476378335293 0.9023106675819312 0.8414692949616364 1.0057756211780173 1.234240389382703 0.7099269377507991 1.0785853282442734 1.052892894949539 1.1241351953074012 1.0 11.076668856117566 -3.630772585166803 12.357739966983793 1.017169253187291 1.0179907570037507 0.0 0.16029961283732289 0.0 0.0 0.018715408614110463 0.0 0.00023400622727916858 3.630772585166803 0.0008215038164598454 SAS(ph)TEKLEQGTSALIR ddPTM_A549_MK2206_60min_R1 2 SASTEKLEQGTSALIR 16 1 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 S(0.005)AS(0.641)T(0.354)EKLEQGTSALIR;S(0.005)AS(0.498)T(0.498)EKLEQGTSALIR 160.2 5.820300000000001e-21 105833000.0 30635.0 33064.0 31575.0 30560.0 40278.0 28515.0 29101.0 27668.0 43846.0 45607.0 45337.0 True False 35805.43904616002 34746.816372237554 36052.80978971668 38047.20137189054 34353.15955594396 31532.438373274897 34388.27501055461 31590.023729696324 33914.95100767436 35304.34702456288 34078.57166245476 1.0506731150826898 1.019608941254983 1.0579319505176619 1.1164552830659895 1.0080574941992573 0.9252863848168554 1.0090879204435983 0.9269761668004375 0.9951987232211185 1.035969094428291 1.0 15.05657724860273 -6.984465646004809 24.880771802197152 0.9873407270760619 1.0585038681985945 0.48940212949910145 0.037522253962737756 150.4330927591025 240941.30284461056 0.004974107152916333 0.00939814875475218 1.0364165848467725e-07 6.984465646004809 0.07116314112253264 SAS(ph)TEKLEQGTSALIR ddPTM_A549_PD325901_60min_R1 4 SASTEKLEQGTSALIR 16 1 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 SAS(0.5)T(0.5)EKLEQGTSALIR;S(0.008)AS(0.929)T(0.063)EKLEQGTSALIR;S(0.003)AS(0.499)T(0.499)EKLEQGTSALIR;S(0.014)AS(0.768)T(0.217)EKLEQGTSALIR 181.23 1.6918999999999998e-34 220877200.0 42693.7 42347.700000000004 43789.3 43965.9 51357.4 51870.9 51398.200000000004 51023.2 50842.5 51540.9 54267.4 True False 47027.932994559225 45916.489298266104 46761.10522445212 46681.57378919641 47750.23339741163 51448.4805881421 53354.18662717422 50005.50224907392 48705.76653455639 48286.598777975 47592.853829391875 0.9881301332158449 0.9647769697287936 0.9825236660965665 0.9808525867462756 1.0033067898929517 1.0810127245693577 1.1210545771941989 1.050693501766689 1.0233840296518888 1.0145766620986845 1.0 15.538457345543293 -6.976164881697859 5.38534876883074 1.0286699548637117 0.9793461605209718 0.41858696264530604 0.034554412032695936 0.2099344480099307 17.522895036009455 0.006127595553197198 0.011532783260357692 1.0564163602252405e-07 6.976164881697859 -0.049323794342739924 SAS(ph)TLCLPSVGAAR ddPTM_A549_PD325901_60min_R1 1 SASTLCLPSVGAAR 14 0 Q8IUC4;Q8IUC4-2;A8MT19 Q8IUC4 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.194)AS(0.403)T(0.403)LCLPSVGAAR 242.48 1.2818e-57 18886000.0 6328.4 6969.0 6181.5 6270.0 7028.2 5462.1 5364.5 6992.3 5454.3 6576.6 6595.6 True False 6970.85450927815 7556.302087707627 6601.01376237919 6657.283659796832 6534.563477973738 5417.618468553481 5568.648983067036 6852.833091146763 5225.074738839177 6161.352353630422 5784.3830129532125 1.2051163440712729 1.3063281028912646 1.141178540148061 1.1509064397860405 1.1296906624856298 0.9365940077656648 0.9627040551424285 1.1847128856787188 0.9033071854229652 1.0651701901193344 1.0 12.497947368174069 -6.705561755538887 0.7574815052733761 0.9662271379677434 1.2654965080391833 0.49736221998101804 0.0855666550714529 0.3788402629380963 0.37604460015521185 0.014450996542895016 0.0636255465741079 1.9698730765034892e-07 6.705561755538887 0.29926937007143994 SAS(ph)TLCLPSVGAARPQVK ddPTM_A549_MK2206_60min_R1 2 SASTLCLPSVGAARPQVK 18 1 Q8IUC4;Q8IUC4-2;A8MT19 Q8IUC4 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.097)AS(0.806)T(0.097)LCLPSVGAARPQVK;S(0.012)AS(0.883)T(0.104)LCLPSVGAARPQVK 155.93 4.1358999999999994e-23 62106000.0 6272.5 7182.9 7117.2 6845.1 7945.5 7223.7 6969.5 6804.4 10312.8 9778.7 9826.9 True False 7331.144652098534 7548.478929353526 8126.525980534334 8522.14980728822 6776.727475340206 7988.1071392960175 8235.767935330752 7768.944537601047 7976.967266157551 7569.684878397903 7386.609521357317 0.9924911599701575 1.0219138980513571 1.1001699706797354 1.1537295673539603 0.9174341023098994 1.0814308129053738 1.1149591583957723 1.0517605560627326 1.0799226956688721 1.0247847617382846 1.0 12.850696599081823 -10.89112286852746 1.1303925353799966 0.9998634805652817 1.0599448146557546 0.06795491365574613 0.06118131053195601 0.8909423345684104 2.013888896300153 0.04199211686899704 0.009965325243098183 1.2849230841930819e-11 10.89112286852746 0.06008133409047289 SAS(ph)TLCLPSVGAARPQVK ddPTM_A549_PD325901_60min_R1 4 SASTLCLPSVGAARPQVK 18 1 Q8IUC4;Q8IUC4-2;A8MT19 Q8IUC4 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.085)AS(0.786)T(0.13)LCLPSVGAARPQVK;S(0.07)AS(0.827)T(0.102)LCLPSVGAARPQVK;S(0.004)AS(0.972)T(0.024)LCLPSVGAARPQVK;SAS(0.89)T(0.11)LCLPSVGAARPQVK 149.73 1.2025999999999999e-17 150421000.0 17508.8 17403.1 19716.7 18644.1 18902.7 17489.3 19734.8 21459.0 16071.2 19133.4 19331.0 True False 19286.280486702693 18869.720313184753 21054.793828148788 19795.703713176732 17575.039562774855 17346.872939358935 20485.81861329693 21030.983410740162 15395.783353103452 17925.31385867353 16953.409549305372 1.1376048240097465 1.113033945077903 1.2419209107710998 1.1676532473072838 1.0366669613956772 1.0232085108844482 1.2083598024172248 1.240516448893424 0.9081231305318321 1.0573279555679689 1.0 14.049287826669785 -8.77073290719988 24.999992545946853 0.9566136922283306 1.143257913844382 0.43969173927051575 0.07694334373279563 106.20430955578901 285693.31493600266 0.013489535524823166 0.014456451984287981 1.6953801452927424e-09 8.77073290719988 0.18664422161605132 SAS(ph)VNKEPVSLPGIMR ddPTM_A549_MK2206_60min_R1 6 SASVNKEPVSLPGIMR 16 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.079)AS(0.916)VNKEPVS(0.005)LPGIMR;S(0.119)AS(0.839)VNKEPVS(0.042)LPGIMR;SAS(0.999)VNKEPVSLPGIMR;SAS(1)VNKEPVSLPGIMR;S(0.032)AS(0.968)VNKEPVSLPGIMR;S(0.165)AS(0.835)VNKEPVSLPGIMR 152.81 8.6266e-16 105755100.0 22992.600000000002 24422.4 23384.4 21822.2 33995.100000000006 26757.300000000003 27071.300000000003 27590.5 45032.299999999996 43718.899999999994 43553.00000000001 True False 26873.188764900882 25665.395843495473 26700.659548587537 27168.639979635784 28994.46582303665 29588.739725941745 31989.804793416966 31501.537867362535 34832.555951806185 33842.770125905285 32737.588098349977 0.8208664817997184 0.7839733265136001 0.8155964168274599 0.8298913132517884 0.8856628575059265 0.9038155051939535 0.977158265212253 0.9622436989776366 1.063992736641518 1.033758810338597 1.0 14.99866041648902 -7.4786031785616265 0.8542524337866287 1.0291697072206472 0.8018288987448653 0.9337946010884629 0.023753899754773294 0.1143831810233149 0.1666135507378064 0.005506489251147424 0.011774144739291637 3.3219785312702286e-08 7.4786031785616265 -0.22734080847578186 SAS(ph)VNKEPVSLPGIMR ddPTM_A549_PD325901_60min_R1 4 SASVNKEPVSLPGIMR 16 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.047)AS(0.953)VNKEPVSLPGIMR;S(0.047)AS(0.936)VNKEPVS(0.016)LPGIMR;S(0.034)AS(0.966)VNKEPVSLPGIMR;S(0.001)AS(0.999)VNKEPVSLPGIMR 153.65 2.553e-16 203878000.0 39676.5 42886.700000000004 45897.2 45283.6 52062.5 47339.4 47779.299999999996 51486.4 54457.4 59132.2 64350.9 True False 43704.42907170444 46500.91271988676 49012.05999428454 48080.66512548256 48405.80960587461 46953.88362172806 49597.567407336195 50459.46336170058 52168.74485870975 55398.582800435586 56436.14725396491 0.774404901791626 0.8239561873462198 0.8684515577175798 0.8519480415471604 0.8577093221485609 0.831982442217994 0.8788262456000968 0.894098300768672 0.9243852990876277 0.9816152500832447 1.0 15.78433188188362 -9.018511018629704 0.1687994612934893 1.0789296237864798 0.7526454166185502 0.8936769367906975 0.020833615238499897 0.7918742712021595 0.10215058753921566 0.09635537683805943 0.07429811076939874 9.582724033501772e-10 9.018511018629704 -0.3262842071679296 SAS(ph)VSSISLTK ddPTM_A549_MK2206_60min_R1 1 SASVSSISLTK 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 S(0.111)AS(0.431)VS(0.431)S(0.027)ISLTK 193.73 7.5986e-20 16210000.0 6161.2 5104.9 4616.6 4708.8 5433.1 3645.3 3113.0 3380.3 4840.3 4930.0 5132.8 True False 7201.05993312228 5364.717605209151 5271.30329929394 5862.4562113860675 4633.898187184051 4031.0432264456954 3678.591804675318 3859.467876734583 3743.9797783708 3816.3095759662974 3858.184101926635 1.8664376149200181 1.3904773498315461 1.3662653621587537 1.51948586602142 1.2010567833893806 1.0448032338406923 0.9534515998960146 1.000332740681635 0.9703994624054344 0.9891465713262809 1.0 11.913706271128303 -5.74984677274786 0.48121223662952295 0.9702992387247582 2.043004839518745 0.8526035805793539 0.10803968885452654 0.7973312348019844 0.16330647414767394 0.02280680672474504 0.44104005608282715 1.778906931116743e-06 5.74984677274786 1.0727056007939868 up SAS(ph)VSSISLTK ddPTM_A549_PD325901_60min_R1 1 SASVSSISLTK 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 SAS(0.858)VS(0.133)S(0.008)ISLTK 180.2 3.0281e-16 8354700.0 3021.0 3169.2 3191.4 3494.8 3752.4 3713.2 3518.1 4541.5 5795.3 6992.9 6760.0 True False 3327.6896960573413 3436.279606308366 3407.98759544721 3710.6658587333286 3488.8443690772383 3682.9609303075345 3651.9832206781894 4450.916219762174 5551.743694698617 6551.367100584219 5928.562855170679 0.5612978688680091 0.5796142657594272 0.5748421124480254 0.6258963511700006 0.5884806241084877 0.6212232239547547 0.6159980605574691 0.7507580384140222 0.9364400496920745 1.1050514704200787 1.0 12.533466707645822 -8.586590792736354 1.5831174743594925 0.9779460193054379 0.5902878663065012 0.9462258822124753 0.04349597441357617 0.031530692182593745 0.15406684762571896 0.004559502751417615 0.0052244779690431165 2.590652768048455e-09 8.586590792736354 -0.3876581529989367 SAS(ph)WGSTDQLK ddPTM_A549_MK2206_60min_R1 1 SASWGSTDQLK 11 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 S(0.013)AS(0.936)WGS(0.021)T(0.03)DQLK 63.727 0.0065808 2122800.0 2280.5 2159.1 2221.7 1614.6 2791.9 2298.7 1716.3 2115.9 3658.7 2906.9 3689.3 True False 2665.3926471280547 2268.9889677382685 2536.7704674525285 2010.1770724821483 2381.2152084075656 2541.9469082464343 2028.1294938529554 2415.8353046719835 2830.0102917433314 2250.2292710702714 2773.1449904999076 0.9611443528048532 0.818200626188407 0.9147630131647864 0.7248726912471241 0.858669567067357 0.9166296450255939 0.731346359747079 0.8711536226731827 1.0205057079374609 0.8114358530761958 1.0 11.437307332560147 -8.710844959925081 5.22799079217861 1.0098131108644977 0.8439114993285275 0.06763498641909171 0.09125782323917858 0.10089636706660364 5.962938778199226 0.010955781500730066 0.012303244373965414 1.94605468546379e-09 8.710844959925081 -0.16590161153597016 SAS(ph)WGSTDQLKEIAK ddPTM_A549_MK2206_60min_R1 1 SASWGSTDQLKEIAK 15 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 S(0.005)AS(0.988)WGS(0.006)T(0.001)DQLKEIAK 90.654 8.7845e-06 4301000.0 2544.1 2458.1 2353.7 2279.8 4293.6 2784.2 2487.7 2330.3 3909.6 4158.7 4804.7 True False 2973.481882726804 2583.2067906060092 2687.490052321651 2838.351102344113 3662.0171276975284 3078.8221959976154 2939.6828886896233 2660.6271612444466 3024.081842348303 3219.2467816574112 3611.5603870259692 0.8233233184771397 0.7152605837315699 0.7441354329768615 0.7859071421152187 1.0139708976908757 0.8524908532771203 0.8139647613951098 0.7366974039261205 0.8373338718665478 0.891372824118381 1.0 11.818406577797504 -14.999999999158495 0.18658738277222536 1.8346568623287105 0.7770580596850772 0.2106118465824638 0.08382380514295533 34.942610019311886 0.39620875964532215 10.57886935539087 0.08468628612247246 1.0000000019376361e-15 14.999999999158495 -1.0575988026436334 SAS(ph)WGSTDQLKEIAK ddPTM_A549_PD325901_60min_R1 2 SASWGSTDQLKEIAK 15 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 S(0.1)AS(0.868)WGS(0.016)T(0.016)DQLKEIAK;S(0.045)AS(0.954)WGSTDQLKEIAK 90.714 8.7431e-06 14554200.0 4382.799999999999 3528.5 3856.8999999999996 3574.2 3728.4 4955.8 3805.8 3586.2 5000.5 4649.6 5844.5 True False 4827.738629553168 3825.8590782718284 4118.652427423811 3794.9702164028463 3466.530046281735 4915.441607890255 3950.6318016136693 3514.670427680524 4790.346374707171 4356.023462494302 5125.6635513380215 0.9418758334797293 0.7464124478621139 0.8035354615401284 0.74038613311094 0.6763085426035853 0.9589863943775846 0.7707551933607468 0.6857005717363251 0.9345807282759871 0.8498457651121464 1.0 12.323523067866997 -8.914144553316097 6.25417981845542 0.9715745865589958 0.789112581894261 0.2772733596204735 0.09348425142633228 0.12773171947069073 7.439948919335943 0.014655321255846843 0.015498429711000242 1.218583930250381e-09 8.914144553316097 -0.18246200466473472 SASAPTLAET(ph)EKETAEHLDLAGASSR ddPTM_A549_PD325901_60min_R1 1 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.019)AS(0.316)APT(0.266)LAET(0.345)EKET(0.053)AEHLDLAGASSR 44.178000000000004 0.016759 5524300.0 1943.1 2358.8 2048.2 2658.0 2635.9 2750.7 2012.3 2236.6 2574.1 2413.9 2744.7 True False 2140.362081565383 2557.5843542093203 2187.2031688271545 2822.178623244015 2450.7634773613418 2728.299211191677 2088.879177672812 2191.989258421244 2465.919528673877 2261.48594204125 2407.119300086828 0.8891798929484622 1.0625083493439917 0.9086392887748684 1.1724298929189823 1.0181312896593615 1.1334291620250245 0.8677921271278343 0.9106275947113116 1.0244276337217386 0.9394989030912074 1.0 11.233091930163106 -5.2441875832940035 23.08005068937289 1.0104909340439088 0.8891796049440416 0.1129354279378888 0.09053165138633389 1770.2625730215107 2368206.804838667 0.011146684414683245 0.40501648819884767 5.699180564016194e-06 5.2441875832940035 -0.1213113290998672 SASAS(ph)HQADIK ddPTM_A549_MK2206_60min_R1 2 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.245)AS(0.3)AS(0.455)HQADIK;S(0.001)AS(0.24)AS(0.759)HQADIK 182.37 1.524e-18 122862000.0 7058.6 8090.400000000001 6986.4 6796.6 7024.1 5559.9 5439.9 6197.2 9692.6 11189.1 11510.1 True False 8249.919113798764 8502.166803107631 7977.176573709475 8461.767305110969 5990.864194769007 6148.244927637073 6428.259414793858 7075.672078129034 7497.241575901662 8661.47453883256 8651.824507400592 0.953546746901992 0.9827021798506261 0.9220224666931193 0.9780327025672964 0.6924394027692709 0.7106298703097816 0.7429946607556889 0.8178242718719793 0.8665503524127977 1.0011153753088395 1.0 13.078788686800788 SASDAGIRGT(ph)PK ddPTM_A549_MK2206_60min_R1 2 SASDAGIRGTPK 12 1 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 S(0.003)AS(0.006)DAGIRGT(0.991)PK;S(0.021)AS(0.02)DAGIRGT(0.96)PK 73.02199999999999 0.00063359 15879800.0 3255.0 3477.3 4108.4 3022.1 4610.4 3127.3 3523.3 3084.0 5171.5 5893.2 6234.7 True False 3804.3644228905137 3654.2797172508335 4691.0328975478105 3762.5146356672262 3932.2162673599505 3458.228810266267 4163.438003666094 3521.1664443538934 4000.1635071885203 4561.922026994845 4686.45192103374 0.8117792494180426 0.7797540183544165 1.000977493547626 0.8028492981610038 0.8390604093709725 0.7379204712940806 0.8883987446835303 0.7513501693146982 0.8535590622908091 0.9734276812955276 1.0 12.194280366647465 -10.262015111207244 0.7652821299726659 0.9968732086234475 0.82928022389366 0.4317222440808456 0.06906316046442453 0.42764405941468453 0.4750946880758516 0.03872051614812636 0.013403950318580044 5.469969298918982e-11 10.262015111207244 -0.16759298472978756 SASDAGIRGT(ph)PK ddPTM_A549_PD325901_60min_R1 1 SASDAGIRGTPK 12 1 Q5TCZ1;H0Y507;Q5TCZ1-2;Q5TCZ1-3 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 S(0.014)AS(0.014)DAGIRGT(0.971)PK 54.7 0.007936499999999999 13496000.0 3174.4 2957.9 2888.7 2836.3 3732.8 3480.2 3770.1 3698.8 3745.2 3631.9 4813.6 True False 3496.6627511302327 3207.1726137509518 3084.744553164242 3011.491809295337 3470.62100546091 3451.8584050566333 3913.5732185778775 3625.0245323475315 3587.8022682838273 3402.5812141760694 4221.557715924495 0.8282873257755485 0.7597130797603228 0.7307123959310129 0.7133603309355299 0.8221185730492532 0.8176740997844436 0.9270448213499858 0.858693585704933 0.8498763986454514 0.8060013490614862 1.0 12.043559723018767 -12.261592651348524 0.1214179808967718 1.3360402610939612 0.6800628397425488 0.14089943438828745 0.0732532797052413 14.234433037629337 0.246048823218773 1.5671762620890055 0.2381960552525679 5.475292799110273e-13 12.261592651348524 -0.6559774213514125 SASEPS(ph)LNR ddPTM_A549_MK2206_60min_R1 1 SASEPSLNR 9 0 H7C560;P15056;A0A2U3TZI2;A0A2R8Y8E0 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 SAS(0.083)EPS(0.917)LNR 139.32 4.2139e-05 52767000.0 4159.6 4479.8 4628.1 3840.2 6253.5 4471.0 4505.5 4749.9 6477.4 6020.9 6878.4 True False 4861.638787543892 4707.802685227131 5284.434172218142 4781.049172393126 5333.618433961357 4944.1182523903935 5324.091029863367 5423.212870958673 5010.2792422823 4660.774508303345 5170.303445817518 0.9403004752993138 0.9105466892925747 1.0220742800875544 0.924713456859234 1.031587118600544 0.9562530138129329 1.0297444019790085 1.0489157798553863 0.9690493594404661 0.9014508639862612 1.0 12.336033239656684 -5.752839468093516 24.999778772485474 0.9912327736561956 0.9254235622049779 0.21532517906518767 0.044833995825501564 150.42752895152233 437279.828629449 0.00460517414719669 0.017284114868207884 1.7666907367000473e-06 5.752839468093516 -0.06580921145121765 SASEPS(ph)LNR ddPTM_A549_PD325901_60min_R1 2 SASEPSLNR 9 0 H7C560;P15056;A0A2U3TZI2;A0A2R8Y8E0 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 SAS(0.318)EPS(0.681)LNR;SAS(0.064)EPS(0.936)LNR 147.78 2.7581999999999998e-05 128083000.0 9028.8 9117.599999999999 8534.4 10031.4 10954.900000000001 11383.400000000001 9787.5 10988.2 11462.7 11040.7 11723.9 True False 9945.397129348734 9885.972150219977 9113.595705516285 10651.016795037634 10185.465616353338 11290.697364554238 10159.968668425512 10769.031730923856 10980.96258161301 10343.588317782345 10281.934623925375 0.9672690493680497 0.9614894970462057 0.8863697386588665 1.0358961795237862 0.9906176209924968 1.0981102076141915 0.9881378398170266 1.0473740715939817 1.0679860340738836 1.0059963125726852 1.0 13.327824123628512 -6.283638852046954 24.496438339449575 1.0326499347849916 0.9406874369286318 0.538156519066604 0.037386462645375554 334.3345815135664 368927.4582411938 0.005342856841714709 0.012425189080328747 5.20428591471123e-07 6.283638852046954 -0.09196249785635979 SASFNT(ph)DPYVR ddPTM_A549_PD325901_60min_R1 1 SASFNTDPYVR 11 0 Q9UKV8-2;Q9UKV8 Q9UKV8-2 AGO2 Protein argonaute-2 1 SAS(0.013)FNT(0.987)DPYVR 184.24 1.3624000000000002e-18 11109000.0 5235.0 5063.5 4705.1 4487.8 5585.4 5034.1 5553.7 4915.7 4784.1 5183.5 5380.9 True False 5766.453346196687 5490.218915354796 5024.41638006476 4765.001213466702 5193.100772583952 4993.103958650536 5765.0490926012535 4817.652507207951 4583.040914155899 4856.212925378353 4719.08341233549 1.2219435094373232 1.1634078984498535 1.0647017526605151 1.0097302372344563 1.1004469128495165 1.0580664765532153 1.2216459402967221 1.0208873389723958 0.9711718386193428 1.029058505870952 1.0 12.204290956772407 -2.0000000000140017 0.1844194628740873 0.9700948417244742 1.9463517457587223 0.3556831238277921 0.06739312403838849 35.08046506319646 0.37346852408704495 0.07055805469501153 9.77493186228944 0.009999999999677598 2.0000000000140017 0.976256904034248 SASLAPRS(ph)PEIMSTISGTR ddPTM_A549_MK2206_60min_R1 2 SASLAPRSPEIMSTISGTR 19 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.004)AS(0.012)LAPRS(0.967)PEIMS(0.007)T(0.008)IS(0.001)GT(0.001)R;SAS(0.001)LAPRS(0.999)PEIMSTISGTR 83.881 3.382e-05 16401200.0 3226.3 3881.1000000000004 3550.7 3136.2 3738.6 2908.9 2768.7 3474.9 4751.4 5065.7 5146.7 True False 3770.8205645381436 4078.6314124815867 4054.2426514757553 3904.569140789367 3188.6568924934722 3216.7178672284567 3271.7369513667077 3967.477716434934 3675.2154864266704 3921.354851718557 3868.632348306151 0.9747167021930028 1.0542825074260112 1.0479782740923604 1.009289275704617 0.8242336323040879 0.8314870935298027 0.8457089371129337 1.0255504682868253 0.9500038141478689 1.013628202079086 1.0 11.917607914844572 -6.542868076225233 24.992194559263847 0.9484681191469788 1.0285402705339088 0.25838627086467536 0.07164375940603498 307.442976107323 384387.91368755396 0.011220585427013862 0.023359556994941383 2.8650481411391743e-07 6.542868076225233 0.08007215138693002 SASLAPRS(ph)PEIMSTISGTR ddPTM_A549_PD325901_60min_R1 2 SASLAPRSPEIMSTISGTR 19 1 Q9UPX8;Q9UPX8-3;H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.002)AS(0.002)LAPRS(0.984)PEIMS(0.002)T(0.002)IS(0.008)GT(0.001)R;SAS(0.003)LAPRS(0.996)PEIMSTISGTR 106.99 3.5945999999999997e-10 26359000.0 5030.0 5200.9 4983.9 5139.4 5626.3 6168.7 5649.0 5633.5 5245.9 5875.7 6120.0 True False 5540.641897109713 5639.19809556014 5322.137424625352 5456.849065575731 5231.128097681287 6118.464152425968 5863.9757862514125 5521.1354231047435 5025.433066108653 5504.707299246764 5367.2787978764145 1.032299998893646 1.0506624134731573 0.9915895233038904 1.0166882085079605 0.9746331976924701 1.139956462639273 1.0925416783960464 1.0286656667228098 0.9363093022290897 1.0256048747504458 1.0 12.38997511405629 -8.633089440961543 6.561059699835543 0.9700609943948544 1.0423952480941532 0.17968362712172448 0.047846432879369086 0.19458461865327084 10.658863701425055 0.008377424850714486 0.009496909087274739 2.3276118472899687e-09 8.633089440961543 0.0723342536992988 SASLS(ph)YPDR ddPTM_A549_MK2206_60min_R1 1 SASLSYPDR 9 0 Q6P4Q7;Q6P4Q7-2 Q6P4Q7 CNNM4 Metal transporter CNNM4 1 S(0.003)AS(0.031)LS(0.966)YPDR 113.15 0.00024943 39395000.0 11845.0 14759.0 15290.0 12314.0 12559.0 9070.9 8329.9 8894.5 12302.0 18780.0 29574.0 True False 13844.14641755396 15510.170059214068 17458.351914006907 15330.930552796468 10711.587736806703 10030.776617223893 9843.335006027926 10155.322613263848 9515.616642257213 14537.584956723555 22229.959599122965 0.6227697515968563 0.6977147209851874 0.7853523905952438 0.6896517505772397 0.481853675398911 0.4512278383816602 0.4427959017260775 0.456830457472559 0.42805370832219736 0.6539636247155889 1.0 14.440217705953133 -10.848081489875577 1.0958160461760158 0.9998745937173732 0.5554838001032825 0.21027707295182707 0.15278230525038008 0.2840910815612007 0.6058449734884028 0.0959879918280398 0.02348985317261737 1.418791278443337e-11 10.848081489875577 -0.44439079361409073 SASLS(ph)YPDR ddPTM_A549_PD325901_60min_R1 2 SASLSYPDR 9 0 Q6P4Q7;Q6P4Q7-2 Q6P4Q7 CNNM4 Metal transporter CNNM4 1 S(0.013)AS(0.224)LS(0.763)YPDR;S(0.008)AS(0.115)LS(0.877)YPDR 146.11 3.0713e-05 93007000.0 21539.0 21568.0 21986.0 23514.0 26688.0 28063.0 23441.0 22228.0 24608.0 25434.0 27164.0 True False 23725.623423826248 23385.611052902586 23478.102172558243 24966.40637583136 24813.52694860178 27834.464232257993 24333.0600824074 21784.645102471324 23573.81133662514 23828.092899406412 23823.000206783472 0.9959124886827018 0.9816400474296121 0.9855224769663133 1.047995893007729 1.0415785893137113 1.1683861810290492 1.0214103963059484 0.9144375147286555 0.9895399879110366 1.0002137720933022 1.0 14.540067493460294 -8.012359983619673 24.936030333453676 0.9878781001942952 1.0379016855641918 0.21537706088338238 0.052664506760782694 839.3694276180768 1693413.8542370342 0.008731603538943372 0.011585153015278639 9.719412545709762e-09 8.012359983619673 0.050023585369896595 SASLVT(ph)R ddPTM_A549_MK2206_60min_R1 1 SASLVTR 7 0 Q9H2K8 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 1 S(0.01)AS(0.329)LVT(0.661)R 71.877 0.021389 127850000.0 2102.9 1988.7 2159.8 2113.9 2839.3 1845.6 1915.8 1981.6 3076.6 2839.1 3121.9 True False 2457.818109031172 2089.9163355755145 2466.0921166692037 2631.8055948965775 2421.642731197968 2040.9001669898723 2263.876061483129 2262.497868395483 2379.7550123206433 2197.745338159414 2346.6460699432587 1.047374864284754 0.8905971643291092 1.050900750759075 1.12151790958413 1.0319590850172486 0.8697094091565418 0.9647283799971885 0.9641410766516612 1.014109048143841 0.9365474266907898 1.0 11.19638455019507 -4.890542501463966 20.880239131624048 0.9981144351935519 10.558480860809162 0.031269815949760416 0.06975723173623005 2620.6706337416804 514704.66561003635 0.008937915689318544 35432.30207317115 1.286641331982184e-05 4.890542501463966 9.56036642561561 SASNGSKT(ph)DT(ph)EEEEEQQQQQK ddPTM_A549_MK2206_60min_R1 1 SASNGSKTDTEEEEEQQQQQK 21 1 Q9UGU0-2;Q9UGU0;A9JX13 Q9UGU0-2 TCF20 Transcription factor 20 2 S(0.19)AS(0.202)NGS(0.202)KT(0.624)DT(0.783)EEEEEQQQQQK 41.086999999999996 0.022446999999999998 1993900.0 555.99 247.99 367.06 569.87 445.22 338.42 506.49 565.3 757.53 891.2 795.66 True False 649.8275193495841 260.6116317490682 419.1146274398546 709.4881755824365 379.72872777936783 374.23137977498493 598.5126768872477 645.4330061586433 585.9506645268339 689.8773010347193 598.0756629011354 1.0865306175432916 0.4357502702666376 0.7007719147219942 1.1862849796309436 0.6349175385893251 0.6257258119477218 1.0007307001659163 1.0791828629638391 0.9797266481042118 1.1534950238374089 1.0 9.224184201935737 -7.78785315812058 24.453474357342774 0.9989546848302023 0.7712576596723445 0.28216172209530044 0.20441481414483825 184.2558408786912 170580.55301949044 0.02955392220280038 0.04084197110220918 1.6298470167139495e-08 7.78785315812058 -0.22769702515785784 SASNGSKT(ph)DTEEEEEQQQQQK ddPTM_A549_MK2206_60min_R1 1 SASNGSKTDTEEEEEQQQQQK 21 1 Q9UGU0-2;Q9UGU0;A9JX13 Q9UGU0-2 TCF20 Transcription factor 20 1 S(0.01)AS(0.009)NGS(0.157)KT(0.792)DT(0.032)EEEEEQQQQQK 109.97 1.4886000000000002e-10 7262400.0 1422.9 1708.6 1626.5 1382.5 2221.8 1466.1 1350.6 1534.8 2348.1 2128.6 2213.8 True False 1663.0507334349952 1795.5604419793458 1857.162157497203 1721.2125620627835 1894.9761632006634 1621.2417288815839 1595.9865375504305 1752.3626001278715 1816.2590991451932 1647.7477816230958 1664.0523622282542 0.9993980785605101 1.0790288110735862 1.1160479078977807 1.0343500007163169 1.1387719558675367 0.9742732654822565 0.9590963444283208 1.053069386459309 1.0914675165107943 0.990201882479632 1.0 10.700485115700275 -7.266062261411613 24.977556023506953 1.0337062103468935 1.074012053441185 0.2065642654659704 0.051314800136543805 691.5484116521329 3736438.64715909 0.008320001924892177 0.013538438203652822 5.4192319353205307e-08 7.266062261411613 0.04030584309429153 SASNKS(ph)PLVLEANR ddPTM_A549_MK2206_60min_R1 2 SASNKSPLVLEANR 14 1 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 S(0.049)AS(0.044)NKS(0.907)PLVLEANR;S(0.009)AS(0.163)NKS(0.829)PLVLEANR 100.45 8.7851e-06 27519000.0 5426.299999999999 6912.0 6082.7 6222.9 9933.099999999999 6630.1 6627.2 7315.0 10388.9 8325.0 9902.1 True False 6342.126779702235 7263.791276460981 6945.318324874421 7747.510779356599 8471.954148298004 7331.692781295814 7831.276456133719 8351.92365124796 8035.8307376642815 6444.376718036395 7443.135285942899 0.8520773217275752 0.9759047763352324 0.9331173031331763 1.0408934517136272 1.1382238563227691 0.985027478291634 1.0521475366602382 1.1220975207882353 1.079629810416149 0.8658148039049137 1.0 12.861694743183136 -5.647909885012699 1.122271311958455 1.0486558207363248 0.8439153288190332 0.3175700371687894 0.07460972133797208 0.5644561154351203 0.8676181717307281 0.008090781126851656 0.11516555484039544 2.249521327298435e-06 5.647909885012699 -0.2047404919172916 SASNKS(ph)PLVLEANR ddPTM_A549_PD325901_60min_R1 2 SASNKSPLVLEANR 14 1 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 SAS(0.011)NKS(0.989)PLVLEANR;S(0.009)AS(0.028)NKS(0.963)PLVLEANR 124.08 2.9059e-07 67976000.0 8136.6 8240.7 7588.200000000001 7875.7 9969.0 8201.0 8966.099999999999 9002.6 9291.1 9515.8 9033.6 True False 8962.62164215167 8935.172709739161 8103.1808835534675 8362.164101987548 9268.811831182978 8134.213775032887 9307.309841938173 8823.036080596923 8900.627377670591 8914.970764023406 7922.524468708556 1.1312835545729352 1.1278188846282826 1.022802885059989 1.055492366734294 1.1699316130599315 1.0267199308958193 1.1747909241175685 1.11366473091312 1.1234584901347076 1.1252689466892398 1.0 12.951744495038605 -10.756460249414594 0.9694398615090783 0.9990079113532127 1.1045156555651292 0.0 0.060763391313355064 0.4607228142156197 0.7575078715840892 0.033970777922105976 0.008344461817826606 1.752022787948344e-11 10.756460249414594 0.10550774421191655 SASPQPAFHLKPDT(ph)PVSVK ddPTM_A549_MK2206_60min_R1 2 SASPQPAFHLKPDTPVSVK 19 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 1 SASPQPAFHLKPDT(0.99)PVS(0.01)VK;SASPQPAFHLKPDT(0.993)PVS(0.007)VK 115.11 3.7448e-14 11608900.0 3676.2 4420.1 3759.1000000000004 3435.8 4696.0 3875.2 3198.7 4190.9 6139.7 5650.9 5110.3 True False 4296.6526855392 4645.064210226443 4292.196905163074 4277.571154238925 4005.2246207535836 4285.271091850425 3779.8623853565505 4784.972909092971 4749.067753086214 4374.357765279501 3841.2714728950455 1.1185496041759706 1.2092517394313722 1.1173896287856429 1.113582100203674 1.042681999701253 1.115586628565138 0.9840133435057083 1.245674236475322 1.2363270304108422 1.1387786039456058 1.0 11.90736821123857 -11.100344923783371 1.4670903223570655 1.000695167876717 1.1428709322742725 0.0 0.08486252168096689 0.4237266434582478 1.6433312203520913 0.057787303558991185 0.012873455122814712 7.936976167003407e-12 11.100344923783371 0.14217576439755542 SASPQPAFHLKPDT(ph)PVSVK ddPTM_A549_PD325901_60min_R1 2 SASPQPAFHLKPDTPVSVK 19 1 Q5VT82;B7ZM79;Q9HC56-2;Q9HC56 Q5VT82 PCDH9 Protocadherin-9 1 SASPQPAFHLKPDT(0.995)PVS(0.005)VK;SASPQPAFHLKPDT(0.998)PVS(0.002)VK 126.46 2.1656999999999997e-15 16720700.0 3912.7999999999997 4381.0 4893.799999999999 5441.0 6179.6 5611.7 5494.0 5741.7 5604.5 5392.700000000001 5634.2 True False 4310.024575548884 4750.2022451208395 5225.922696810041 5777.078212592437 5745.566214462667 5566.000175753206 5703.077176432155 5627.177289223485 5368.962355173744 5052.204001676065 4941.229118136483 0.8722575846016125 0.9613402114234108 1.0576159436988275 1.1691581334263617 1.1627807731833186 1.1264404144554923 1.1541818928208278 1.138821365026218 1.0865641375477393 1.0224589633239745 1.0 12.270654237823678 -5.594473334613521 2.541621800270295 1.0793936699005262 0.8777480358588283 0.605289396395039 0.05742974930278239 0.2171641974739441 2.54313521992095 0.010272001803923354 0.06844096027153725 2.5440559916460143e-06 5.594473334613521 -0.20164563404169789 SASPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SASPSPR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.038)AS(0.117)PS(0.845)PR 65.305 0.025124 3117500.0 839.36 803.63 772.94 677.8 844.99 854.52 713.13 955.88 841.55 755.95 988.68 True False 924.5712092958263 871.3547204397298 825.3963564658042 719.6661666045126 785.6408174572474 847.5610724352034 740.268552389709 936.8142235266469 806.1825800689568 708.2191879887663 867.0786277588969 1.0663060761692722 1.0049316089036644 0.9519279221530034 0.8299895114063699 0.9060779406913321 0.9774904435435806 0.8537502006052798 1.080425919328669 0.9297687133088084 0.8167877344864004 1.0 9.760019014518754 -11.025573403241252 1.0389288562105776 1.0031114466708022 0.9506244711929508 0.0 0.09207624967424993 1.674798450986358 2.8766928846550393 0.07079505213620153 0.012406236042151469 9.428152459909669e-12 11.025573403241252 -0.052486975477851416 SASPS(ph)VPGPTKPK ddPTM_A549_MK2206_60min_R1 2 SASPSVPGPTKPK 13 1 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.289)AS(0.248)PS(0.464)VPGPTKPK;S(0.19)AS(0.32)PS(0.49)VPGPTKPK 73.834 0.00033275 12687000.0 4584.9 4664.5 4319.8 3878.6000000000004 6091.700000000001 4230.1 3817.4 3944.9 5719.4 5750.5 6217.0 True False 5358.71902995721 4901.903126309646 4932.412596345786 4828.85717411697 5195.618999626193 4677.7263742868745 4510.972166774031 4504.10165574957 4423.965032005031 4451.458056104301 4673.147319528888 1.1467044934713158 1.0489511224747392 1.0554797996060257 1.0333201253761841 1.111802955133453 1.0009798652695692 0.9652963748698583 0.9638261642056772 0.9466778446118028 0.9525610368630673 1.0 12.19017880309819 -7.43750401063819 4.771841528694528 0.9728400565011786 1.0733601373210635 0.7381429088044578 0.032211850931928424 0.10114822742839467 4.005528663882969 0.005042862980557863 0.008092964789561962 3.651707549473381e-08 7.43750401063819 0.10052008081988495 SASPS(ph)VPGPTKPK ddPTM_A549_PD325901_60min_R1 1 SASPSVPGPTKPK 13 1 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.188)AS(0.322)PS(0.485)VPGPT(0.005)KPK 46.926 0.0099407 9782400.0 2523.3 2235.2 2715.8 2603.0 2797.3 3241.8 2265.5 2870.6 3003.8 2810.9 3219.1 True False 2779.4635584447174 2423.568148435081 2900.11051943208 2763.7813981580794 2600.8272981611144 3215.3998556153633 2351.714842229169 2813.343631057864 2877.56073199588 2633.4192942888044 2823.171107556204 0.9845182784017222 0.8584559901269933 1.0272528334077762 0.978963475065621 0.9212432399864156 1.1389319786566818 0.8330047144272678 0.9965189936691983 1.019265436761556 0.9327877036005612 1.0 11.463100855370303 -5.016442559002004 0.28525150560451207 1.0089933267364035 0.8672864835942351 0.0 0.08141817876722521 18.03318800722394 0.9506369640265792 0.030897206573301608 0.9132031710350657 9.62847353425112e-06 5.016442559002004 -0.14170684314216841 SASPS(ph)VPGPTKPKPK ddPTM_A549_PD325901_60min_R1 1 SASPSVPGPTKPKPK 15 2 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.075)AS(0.394)PS(0.524)VPGPT(0.007)KPKPK 56.215 0.0041451 9012000.0 1025.7 1108.9 928.26 950.81 1111.8 1195.9 1081.1 1231.2 770.66 1190.0 1349.0 True False 1129.8283089195693 1202.3508946848883 991.2573056808385 1009.5393742538163 1033.7110035017793 1186.160986899382 1122.2418521006198 1206.6427501422847 738.271840242341 1114.8631969133298 1183.0815520155693 0.9549876819520391 1.0162874170732277 0.8378605041994549 0.8533134275772485 0.8737445036994167 1.0026028931636761 0.9485752272856429 1.0199151090527743 0.6240244715037407 0.9423384170042898 1.0 10.208333809424543 SASPT(ph)VPR ddPTM_A549_MK2206_60min_R1 1 SASPTVPR 8 0 Q92817;K7EKI0;K7EQ87 Q92817 EVPL Envoplakin 1 S(0.002)AS(0.194)PT(0.804)VPR 88.819 0.0028357 58066000.0 3211.0 2810.9 2724.2 2693.1 3859.2 2521.1 2778.2 3226.1 3667.8 3640.6 4254.9 True False 3752.9382985872326 2953.962803675372 3110.5325234883976 3352.9096208978526 3291.516792251327 2787.881128629262 3282.9629783967134 3683.4095545168893 2837.0491562730467 2818.1859314934914 3198.2909007340327 1.173419934292376 0.9236066684857887 0.9725608520396022 1.0483441703593421 1.0291486592091728 0.8716784104877457 1.0264741639490167 1.1516805909279604 0.8870516298632879 0.8811537220853475 1.0 11.643085449859239 -5.252882520853098 24.146882397433984 0.9708952612222636 1.1734201018828228 0.31478918983196225 0.08156285942298701 606.823488514078 1712351.6341084857 0.011123045964503227 0.1741788079462672 5.5862128456028874e-06 5.252882520853098 0.2025248406605592 SASPT(ph)VPR ddPTM_A549_PD325901_60min_R1 1 SASPTVPR 8 0 Q92817;K7EKI0;K7EQ87 Q92817 EVPL Envoplakin 1 S(0.006)AS(0.334)PT(0.66)VPR 88.819 0.0028357 74812000.0 4782.9 4822.1 5413.2 5063.4 5917.3 5760.5 4721.0 5900.0 5757.7 5184.1 6681.5 True False 5268.456487015119 5228.475290161425 5780.572304215972 5376.154718184256 5501.689261576794 5713.58839788769 4900.660238430326 5782.319871539539 5515.723891941096 4856.7750412759615 5859.717857518176 0.8990972970235328 0.8922742386739918 0.9864932825732116 0.9174767196830995 0.9389000281844591 0.9750620314520778 0.8363304100286411 0.9867915166121295 0.9412951316187131 0.8288411079459377 1.0 12.516615485937816 -14.99998455710244 0.166503172449812 1.282610821451458 0.9129117167937051 0.0 0.06692186092943068 49.58132976419452 0.5250563321857826 4.534638629125539 0.056260818255231 1.0000355592179278e-15 14.99998455710244 -0.3696991046577529 SASQS(ph)S(ph)LDKLDQELKEQQK ddPTM_A549_MK2206_60min_R1 1 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.057)AS(0.367)QS(0.799)S(0.777)LDKLDQELKEQQK 72.819 0.00052265 8402700.0 2658.7 2553.4 2664.5 2180.2 3690.5 2329.0 2642.6 2213.9 3938.1 3820.0 2897.2 True False 3107.423561025806 2683.3571535468 3042.3661657862285 2714.349097872896 3147.6323387757893 2575.4532341349213 3122.7262136315444 2527.7271047843965 3046.126637853449 2957.059346894779 2177.745281347773 1.42689945772844 1.2321721812599276 1.3970257182251153 1.246403388459199 1.445362947510449 1.1826237238089723 1.4339262908189783 1.1607083373956504 1.3987524913695362 1.3578536352353847 1.0 11.08861950463671 -10.866999670015383 0.8765007033539762 0.9786672282611744 1.325932949197866 0.0 0.1447294106449407 0.34611352884247365 0.42188783243887096 0.08386319649270454 0.015879936677649992 1.3583144786580894e-11 10.866999670015383 0.3472657209366916 SASQS(ph)SLDKLDQELKEQQK ddPTM_A549_PD325901_60min_R1 1 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.007)AS(0.045)QS(0.543)S(0.405)LDKLDQELKEQQK 70.345 0.00022311 12517000.0 2912.1 2636.6 3295.4 3200.9 3303.5 3305.5 3592.2 3044.7 3309.4 3224.4 3213.3 True False 3207.7342482252843 2858.795535148506 3519.045660850016 3398.6123232286577 3071.473556456312 3278.581103935032 3728.903136727265 2983.971069979055 3170.317426748506 3020.8108337204535 2818.084470786972 1.1382676003780325 1.014446360562842 1.2487367562361589 1.2060008699027993 1.0899153621177933 1.1634076756469485 1.3232048845171558 1.0588650201623508 1.1249902050889093 1.0719376459559669 1.0 11.460499141078627 -10.090084425054716 0.6306029188100055 1.000325838998814 1.158338480044237 0.2198769848872829 0.08366260392108983 0.6847240945541191 0.5247700619534201 0.05276972712404448 0.01835635046796345 8.12672520624082e-11 10.090084425054716 0.15801264104542279 SASQSS(ph)LDKLDQELK ddPTM_A549_MK2206_60min_R1 2 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.002)AS(0.014)QS(0.214)S(0.77)LDKLDQELK;SASQS(0.022)S(0.978)LDKLDQELK 224.89 1.2741999999999998e-54 123370000.0 7709.6 7749.4 6684.4 7150.200000000001 9752.900000000001 8259.7 8491.8 8886.6 10815.5 10273.9 10936.4 True False 9010.791998376866 8143.811359636389 7632.348432569511 8901.999320984678 8318.261329588511 9133.735971654873 10034.650140360385 10146.302764071108 8365.806518804491 7953.018854466557 8220.5900507151 1.0961247237469318 0.990660197065534 0.9284428958850199 1.0828905548221934 1.0118812978473382 1.1110803379448826 1.2206727349805604 1.2342548042750887 1.0176649689612924 0.9674510960164876 1.0 13.005026234857267 -4.85543603690734 16.04205062161856 1.0414184577573127 12.506616811798777 0.0 0.09527657118187034 3187937.5664594267 4003243.742721276 0.013836195860460386 1358864270.6667027 1.3949670939116292e-05 4.85543603690734 11.465198354041464 SASQSS(ph)LDKLDQELK ddPTM_A549_PD325901_60min_R1 3 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SASQS(0.023)S(0.977)LDKLDQELK;S(0.001)AS(0.005)QS(0.16)S(0.835)LDKLDQELK;SASQS(0.094)S(0.906)LDKLDQELK 253.31 3.0752999999999994e-77 246317900.0 14738.100000000002 14857.3 16479.0 14453.6 19745.5 13677.0 15039.3 14494.5 15467.699999999999 14472.800000000001 15279.6 True False 16234.301062384222 16109.376812698894 17597.36403627705 15346.36604549274 18358.644198277 13565.619046594891 15611.628791320743 14205.395826784712 14817.646359375667 13558.984938056496 13400.30606536477 1.211487333438179 1.20216484117002 1.3132061275645222 1.145225039684569 1.37001678235752 1.0123365078695776 1.1650203148472473 1.060079953210981 1.1057692478886165 1.011841436450609 1.0 13.709978332019158 -8.038837701369236 0.3557033465120749 1.0101448255010046 1.268456106710589 0.5123733637355669 0.08211866640452467 0.751338850609493 0.23429349613438877 0.04010548065658845 0.06934749899228207 9.144549152849235e-09 8.038837701369236 0.25831128120958446 SASQSS(ph)LDKLDQELKEQQK ddPTM_A549_MK2206_60min_R1 4 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SASQS(0.134)S(0.866)LDKLDQELKEQQK;SASQS(0.029)S(0.971)LDKLDQELKEQQK;SASQS(0.205)S(0.795)LDKLDQELKEQQK;SASQS(0.152)S(0.848)LDKLDQELKEQQK 222.69 2.5174999999999996e-75 653504000.0 43016.7 52510.0 53149.0 47571.3 75977.40000000001 56929.3 58948.5 51927.1 81666.59999999999 77378.70000000001 79139.5 True False 50276.86730265879 55182.53471165597 60686.32739552347 59226.27063555682 64801.2251066532 62953.52073938909 69658.67940825682 59287.92544507424 63169.24549476201 59898.79792815885 59486.97801091475 0.8451743387171883 0.9276405787755937 1.0201615450088701 0.9956174042777886 1.0893346287445194 1.0582739759924986 1.170990387097421 0.9966538463963661 1.0619003958004327 1.0069228582626695 1.0 15.860286269563606 -5.470061138560124 1.356290744991258 1.0427189758993547 0.8008341256368208 0.6297353564265873 0.049033334331530815 0.46253775434382377 0.9703725984856807 0.00731672041673014 0.13707790906900186 3.3879645812196405e-06 5.470061138560124 -0.24188485026253392 SASQSS(ph)LDKLDQELKEQQK ddPTM_A549_PD325901_60min_R1 5 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SASQS(0.026)S(0.974)LDKLDQELKEQQK;SASQS(0.202)S(0.798)LDKLDQELKEQQK;SAS(0.003)QS(0.228)S(0.769)LDKLDQELKEQQK;SASQS(0.009)S(0.991)LDKLDQELKEQQK;SAS(0.019)QS(0.379)S(0.602)LDKLDQELKEQQK 214.93 7.769499999999998e-67 1126902000.0 52257.600000000006 53351.6 57910.399999999994 53253.6 63894.6 62488.09999999999 68133.79999999999 64996.1 62752.7 57662.3 58802.5 True False 57562.753081988194 57847.7265694565 61840.547987524675 56542.95392429927 59406.86372040363 61979.217631463536 70726.66904324602 63699.70179704592 60115.42224739259 54021.49253729032 51570.165279759436 1.1162026099726456 1.121728547031842 1.1991535736224646 1.0964276266628834 1.1519618639601295 1.2018425245534263 1.3714648510348142 1.23520453059411 1.1657015625464178 1.047533825890083 1.0 15.654249048858292 -10.276877466267443 0.896929412301833 1.0097559706365535 1.1851248132009546 0.4165731295351627 0.07252626809442544 0.3878225910750658 0.6061367180806042 0.03836033240403883 0.014994459357090826 5.285943706506603e-11 10.276877466267443 0.1753688425644011 SASS(ph)DTSEELNSQDSPPK ddPTM_A549_MK2206_60min_R1 1 SASSDTSEELNSQDSPPK 18 0 J3QRP6;O14745;O14745-2 J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 SAS(0.154)S(0.648)DT(0.162)S(0.036)EELNSQDSPPK 370.22 2.6470999999999986e-273 24586000.0 2997.6 2702.8 2910.5 1926.7 3708.3 2493.4 2264.3 2685.7 3544.1 3118.3 2605.1 True False 3503.521595716315 2840.360975407806 3323.2526648605044 2398.74158649285 3162.813982355307 2757.249933015032 2675.694000426061 3066.4061996112996 2741.367008764736 2413.8738642465933 1958.1817728976541 1.7891707727071307 1.4505093524615602 1.697111427987026 1.2249841254232847 1.6151789512753338 1.4080663864698029 1.3664175805633485 1.5659456349007532 1.3999553293298965 1.2327118440463374 1.0 10.935298977431058 -13.102114204770626 0.16967787094216694 2.5305471935202766e-16 1.6467945525215641 0.4760708945368244 0.1581001975173723 11.86289734633912 0.2279131894000752 4.420017797835377 0.20474099642302945 7.904707335795092e-14 13.102114204770626 1.646794552521564 SASS(ph)GAEGDVS(ph)SEREP ddPTM_A549_PD325901_60min_R1 1 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 2 S(0.037)AS(0.359)S(0.604)GAEGDVS(0.556)S(0.444)EREP 85.469 0.00022332 13466000.0 461.31 388.27 433.79 450.43 305.16 443.37 517.11 233.06 189.06 243.73 391.26 True False 508.141851601527 420.9908755336833 463.2295979911781 478.2520380992481 283.72661434484877 439.759341718855 536.7889040234497 228.411435467967 181.11446567386005 228.34084620477793 343.137500401491 1.4808694794564021 1.2268868166291917 1.3499824340072777 1.3937620852855346 0.8268598273662073 1.2815834503786696 1.5643551153557254 0.6656557071165705 0.5278189223327252 0.6654499899824582 1.0 8.422642991819686 -8.273964884034113 24.964746720844477 0.7624426835155661 1.2866143196557844 0.646868376949111 0.20793251728502812 452.7945835157828 902468.9629905097 0.039892533659016495 0.04839340015362246 5.321512859496348e-09 8.273964884034113 0.5241716361402183 SASS(ph)GAEGDVSSER ddPTM_A549_MK2206_60min_R1 1 SASSGAEGDVSSER 14 0 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 S(0.001)AS(0.035)S(0.964)GAEGDVSSER 231.32 1.9547999999999995e-47 20241000.0 2484.5 2701.5 2574.8 2626.5 3925.3 2740.9 2949.9 3008.3 3916.1 3418.0 3573.3 True False 2903.8228598069063 2838.994810960555 2939.9453569774355 3269.992617908065 3347.893569813469 3030.9402187378278 3485.858645875915 3434.7357375323636 3029.1096027266703 2645.8714260959055 2685.9509919370394 1.0811153548683117 1.0569793788058448 1.0945640355326147 1.2174431431266843 1.246446260510157 1.1284421152271251 1.2978117085308405 1.278778260602335 1.1277605629513567 0.9850780725480662 1.0 11.391217266145825 -9.90274214705505 1.0304811733432093 1.0184188962209726 1.1722239570402735 0.42077916013867 0.0787389950721553 0.37158433379856093 0.8030189667588451 0.02875267011267434 0.01652088440357369 1.251001564855453e-10 9.90274214705505 0.1538050608193009 SASS(ph)GAEGDVSSEREP ddPTM_A549_PD325901_60min_R1 1 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SAS(0.173)S(0.827)GAEGDVSSEREP 343.7 8.015699999999996e-211 257090000.0 3127.6 2843.3 2673.0 2620.7 3428.8 3202.9 3055.2 3024.6 3371.6 3345.0 3982.1 True False 3445.111649582571 3082.9148695622193 2854.4058540547717 2782.5746869584605 3187.972916717843 3176.816644318109 3171.467307869589 2964.2719802472034 3229.903377054833 3133.7961291387273 3492.326944611711 0.9864802763950872 0.8827681137697686 0.8173363775286894 0.7967680950524054 0.9128506486589253 0.9096561389304054 0.9081243990522783 0.8487956675478966 0.9248571019498133 0.8973375571189981 1.0 11.769972912154739 -9.72534413112373 0.5670729644537946 0.9998339926617378 0.8763899864161387 0.060539005006170266 0.05757735399363948 0.5485730626927179 0.3753145314845811 0.029419519554242626 0.013333769762685464 1.8821570937360243e-10 9.72534413112373 -0.12344400624559904 SASS(ph)PKPDTK ddPTM_A549_PD325901_60min_R1 1 SASSPKPDTK 10 1 Q8N111 Q8N111 CEND1 Cell cycle exit and neuronal differentiation protein 1 1 S(0.179)AS(0.153)S(0.63)PKPDT(0.038)K 46.88 0.009558200000000001 8562800.0 2432.1 1901.0 1805.5 1872.5 2079.4 1798.9 1619.2 1759.3 2180.5 2327.0 2725.0 True False 2679.0050015826105 2061.2039415600802 1928.032087353494 1988.1600722439507 1933.3501175405647 1784.2503548233947 1680.819542060239 1724.20938135585 2088.8611678930065 2180.072822871696 2389.842275198238 1.1209965734497631 0.862485345979204 0.8067612274511142 0.8319210405126138 0.8089864915374773 0.7465975363061944 0.7033181894486382 0.7214741321005489 0.8740581709392244 0.9122245620543551 1.0 11.222699691027925 -9.800197012322947 1.0879565329616996 0.978646062917826 0.8219736131399735 0.1562300775540053 0.10833802881023623 0.43737336966647583 1.057613544476539 0.033655161798605004 0.021142921579058428 1.5841743883075123e-10 9.800197012322947 -0.15667244977785244 SASS(ph)SWLEGTSTQAK ddPTM_A549_PD325901_60min_R1 1 SASSSWLEGTSTQAK 15 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 SAS(0.319)S(0.639)S(0.042)WLEGTSTQAK 299.27 5.541599999999998e-124 22375000.0 5425.7 5371.7 4365.0 4773.5 5203.3 5342.9 4691.4 4758.4 7147.3 6174.8 6977.6 True False 5976.513069810766 5824.392010982787 4661.23514887732 5068.348253594925 4837.83815841051 5299.389193832849 4869.933794232584 4663.489979107412 6846.923836405268 5784.922074202042 6119.399434650731 0.9766502634178643 0.9517914418206659 0.7617144784639088 0.8282427561266402 0.7905740113999656 0.8659982487538527 0.7958189110285687 0.7620829509348059 1.1188882029231455 0.9453414727996458 1.0 12.579174356670519 -8.763840278473413 24.9999994529139 1.0561416574210294 0.8397586302481413 0.49605592794132825 0.07859666355302247 30.29418034946878 315445.4200184699 0.013655969188072227 0.014875679186383968 1.7225019471961735e-09 8.763840278473413 -0.21638302717288804 SASSASSLFS(ph)PSSTLFSSSR ddPTM_A549_MK2206_60min_R1 4 SASSASSLFSPSSTLFSSSR 20 0 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 SASSASS(0.003)LFS(0.944)PS(0.015)S(0.015)T(0.015)LFS(0.003)S(0.003)S(0.003)R;SASSASS(0.003)LFS(0.878)PS(0.035)S(0.035)T(0.035)LFS(0.004)S(0.004)S(0.004)R;SASSASSLFS(0.316)PS(0.316)S(0.316)T(0.049)LFS(0.001)SSR;SASSAS(0.001)S(0.021)LFS(0.722)PS(0.165)S(0.079)T(0.01)LFS(0.001)S(0.001)S(0.001)R 136.43 3.7446999999999995e-17 8539300.0 3617.38 4356.14 4340.07 4151.860000000001 5987.84 4249.41 4106.58 5089.84 7321.969999999999 5912.849999999999 6100.549999999999 True False 4227.905307550133 4577.8489194216945 4955.557187143491 5169.065886384075 5107.036668043684 4699.079745669931 4852.692429567484 5811.340406981262 5663.555485783452 4577.13307834733 4585.6150683853875 0.9219930684323215 0.9983064106236837 1.080674481665196 1.1272350184866526 1.1137081049940571 1.0247436114005302 1.0582424292486756 1.2672979132170066 1.2350699745449003 0.9981503048311807 1.0 12.162899540095552 -5.5776476563233235 1.6368334911903355 1.1158629663344921 0.9042162274206237 0.30914902922588394 0.08330248030985925 0.5857281721422434 2.2759024253083133 0.014327206899911146 0.16137022092408995 2.644553416840245e-06 5.5776476563233235 -0.21164673891386843 SASSASSLFS(ph)PSSTLFSSSR ddPTM_A549_PD325901_60min_R1 2 SASSASSLFSPSSTLFSSSR 20 0 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 SASSAS(0.003)S(0.012)LFS(0.703)PS(0.077)S(0.077)T(0.025)LFS(0.031)S(0.031)S(0.039)R;SASSASSLFS(0.79)PS(0.153)S(0.03)T(0.006)LFS(0.005)S(0.008)S(0.008)R 141.07 8.782799999999999e-21 16766700.0 1524.49 1702.37 2194.74 1648.83 1711.6399999999999 2012.15 1808.7199999999998 2226.96 1786.69 1614.54 2171.2 True False 1679.2551025297782 1845.834694368035 2343.68825444376 1750.6744843353752 1591.4203112374398 1995.763717526207 1877.551829369562 2182.5415357836764 1711.601632681841 1512.5976688608791 1904.1561643707944 0.8818893817381139 0.9693714879619492 1.2308277536775476 0.9193964849589238 0.835761446994189 1.0481092648121555 0.9860282809262004 1.1461988132180698 0.8988767122718736 0.7943663955528033 1.0 10.894936087007766 SASSEEAS(ph)ESPTAR ddPTM_A549_MK2206_60min_R1 1 SASSEEASESPTAR 14 0 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 SASSEEAS(0.518)ES(0.428)PT(0.055)AR 62.042 0.0062634 13277000.0 164.62 321.4 406.49 115.48 301.37 228.63 277.86 295.45 382.14 452.8 425.87 True False 192.40383142741518 337.75788718960627 464.1363943443212 143.77260518409418 257.0388722224249 252.8234748476887 328.34356532190304 337.3309422776773 295.58590015218425 350.51216551674247 320.1147255859368 0.6010464875529856 1.0551151202787548 1.4499064155663808 0.44912837083934 0.8029586010201246 0.7897902053237993 1.0257059081580961 1.0537813955925583 0.9233748919583281 1.0949579556990585 1.0 8.322445233547201 -7.772895004148321 24.947608174567502 0.9752952555938571 0.8727701793050083 0.08371031250091299 0.24452699095772246 638.6715178976333 1390871.916590761 0.03724264555266351 0.051695950408547124 1.6869608189162533e-08 7.772895004148321 -0.10252507628884877 SASSEEASES(ph)PTAR ddPTM_A549_MK2206_60min_R1 1 SASSEEASESPTAR 14 0 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 SASSEEAS(0.011)ES(0.929)PT(0.06)AR 115.78 3.8531000000000004e-06 14028000.0 274.85 438.26 454.6 138.57 376.22 396.59 450.64 171.1 342.33 517.13 514.28 True False 321.23796056265996 460.5655620401895 519.0691157689693 172.51965622064364 320.87853637562046 438.5568905648641 532.5154548213574 195.35394897177392 264.7928015886777 400.30997383761695 386.5700825940673 0.8309954003863982 1.1914154322279098 1.3427555290512165 0.4462830001301588 0.8300656228293053 1.1344822331359448 1.377539232337712 0.5053519601435706 0.6849800683275677 1.0355430796696643 1.0 8.594586178686223 -8.26990635342883 24.817219690992037 0.8211424442233634 1.0156004332860142 0.11833852978718296 0.2815412199774221 1107.9187065488659 3247371.704281138 0.04767891661047773 0.058107592951817735 5.371476085920263e-09 8.26990635342883 0.19445798906265088 SASSEEASES(ph)PTAR ddPTM_A549_PD325901_60min_R1 1 SASSEEASESPTAR 14 0 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 SASSEEAS(0.02)ES(0.96)PT(0.02)AR 92.45700000000001 6.1266e-05 15980000.0 291.64 252.46 282.73 324.06 446.0 436.83 366.17 305.8 214.46 374.08 340.87 True False 321.24707810597954 273.73569020844724 301.9177579936047 344.0764502063414 414.67449861647185 433.2726013105251 380.1047997259125 299.700579104541 205.44699200473937 350.46052495910794 298.9451509529629 1.0746020702524315 0.9156719529848397 1.0099436536473863 1.1509684940849891 1.3871256894269486 1.4493381141301662 1.2714867543903383 1.0025269791102818 0.687239754014492 1.1723238321207983 1.0 8.223736999592905 -8.506227854008955 5.979971808933192 0.8515682772291474 1.178316147565644 0.1846402404896912 0.18749711733594804 0.1373422105874417 18.11699767458197 0.03309618864956655 0.03902620004263443 3.1172536777340347e-09 8.506227854008955 0.32674787033649666 SASSEEASESPT(ph)AR ddPTM_A549_PD325901_60min_R1 1 SASSEEASESPTAR 14 0 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 SASSEEAS(0.013)ES(0.376)PT(0.61)AR 79.875 0.00058679 16723000.0 226.11 344.23 325.61 167.97 272.82 417.67 270.32 376.57 384.36 135.31 264.94 True False 249.06452074661567 373.2394701752899 347.7078526519918 178.345125412452 253.6580643779055 414.2686339980473 280.6071755247798 369.05901593654994 368.20668584790485 126.76650350785096 232.3540595930354 1.0719180942344988 1.6063393548148595 1.4964569728671702 0.7675576046522311 1.0916876805259341 1.782919716245253 1.207670638577432 1.5883476130477392 1.5846793746268657 0.5455747307788835 1.0 7.860181041008456 -11.025569995066475 1.3491660445517994 1.002276749193313 1.3824400977692928 0.2752613609251323 0.3193843288763988 0.5905273898720859 1.9336570967998892 0.20053561263686492 0.04638125102214025 9.42822644868648e-12 11.025569995066475 0.38016334857597966 SASSGAEGDVS(ph)SEREP ddPTM_A549_MK2206_60min_R1 2 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SASSGAEGDVS(0.657)S(0.343)EREP;SASSGAEGDVS(0.797)S(0.203)EREP 155.98 2.745e-20 57059000.0 2288.7 2610.8 2300.45 2142.42 2904.5 2218.8 1955.13 2057.75 3001.0 3175.3999999999996 3314.6 True False 2674.9766066573 2743.678568371577 2626.6884016074027 2667.312996176889 2477.251897567885 2453.5919432797614 2310.3518133873627 2349.4423640950768 2321.2782916122505 2458.074934588921 2491.4933416938184 1.0736438913534252 1.1012185031593593 1.054262661533614 1.0705679808734874 0.9942839726329545 0.9847876782250239 0.9272960014481483 0.9429856081806064 0.9316815151647772 0.986586997225456 1.0 11.282795003207656 -6.858233718761987 1.7819955820933446 0.9621986808939366 1.0802848990879057 0.8322337168162659 0.02370010194504672 0.12863660332719928 0.8263201914593228 0.004554892106464923 0.010371056902357402 1.386009736822993e-07 6.858233718761987 0.11808621819396914 SASSGAEGDVS(ph)SEREP ddPTM_A549_PD325901_60min_R1 2 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SASSGAEGDVS(0.5)S(0.5)EREP;SASSGAEGDVS(0.988)S(0.012)EREP 279.71 5.1776999999999985e-107 102708000.0 3328.94 3270.04 3660.7 4419.299999999999 4083.0 3679.9 3918.98 4669.6 4192.4 4216.1 4245.5 True False 3666.8915381638963 3545.6177470063767 3909.1371155773677 4692.270124041487 3796.2241655853218 3649.932114466957 4068.1189284481443 4576.461164769667 4016.208007463717 3949.8947264758735 3723.330414441882 0.9848418297610458 0.9522705084818146 1.0499033608230919 1.2602346828638487 1.019577567132023 0.9802869227801456 1.092602180206439 1.22913108839836 1.0786601135064013 1.0608499076942526 1.0 11.86237793365439 -5.818016925826512 6.338398941167565 1.065135027290877 0.9687443291146891 0.18976009076062406 0.08532638862201812 0.26566187806796 21.782555803421563 0.012561054946192435 0.04053524349625764 1.5204882703514667e-06 5.818016925826512 -0.09639069817618795 SASSGAEGDVSS(ph)EREP ddPTM_A549_MK2206_60min_R1 2 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SASSGAEGDVS(0.069)S(0.931)EREP;SASSGAEGDVS(0.13)S(0.87)EREP 173.06 3.6134999999999997e-28 55596000.0 2030.9700000000003 2159.38 1756.2 2113.3999999999996 2448.6 1827.87 1958.69 1913.21 2525.3999999999996 2795.7 2988.8999999999996 True False 2373.748083550827 2269.2832185422903 2005.2555677814862 2631.18309487413 2088.414183640807 2021.2939901580928 2314.558619305977 2184.413376459893 1953.400932235114 2164.149428302023 2246.6736405565225 1.0565611492031513 1.0100635791410129 0.892544218075557 1.1711461101321154 0.9295583238887722 0.8996829595852645 1.0302157721192824 0.9722878022990437 0.869463591405843 0.9632682688020243 1.0 11.133574853618404 SASSGAEGDVSS(ph)EREP ddPTM_A549_PD325901_60min_R1 2 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SASSGAEGDVS(0.128)S(0.872)EREP;SASSGAEGDVS(0.001)S(0.999)EREP 304.23 2.683799999999999e-143 48821000.0 4362.6 3329.9 3466.2 3864.4 4572.8 3187.8999999999996 3610.5 4097.8 4073.6000000000004 4566.7 4334.5 True False 4805.487940423624 3610.5223592850643 3701.4371759538535 4103.095211310827 4251.622303303594 3161.9387993448745 3747.8995532414074 4016.0661643380863 3902.400758325591 4278.357782642104 3801.3839786593626 1.2641416829768353 0.9497915442255298 0.97370778556794 1.0793687863013168 1.1184406329831003 0.8317862170976998 0.985930275468563 1.0564747436417712 1.0265736848035685 1.1254737239543364 1.0 11.89230904417628 -5.253324151524422 24.742943126838092 1.0079771047845039 1.264141829059705 0.4449574007101563 0.0797468439931452 517.8864995945455 1578968.9678687244 0.009295784937664916 0.14131960716514208 5.5805351566185105e-06 5.253324151524422 0.2561647242752012 SASSSAAGS(ph)PGGLTSLQQQK ddPTM_A549_PD325901_60min_R1 2 SASSSAAGSPGGLTSLQQQK 20 0 E5RJ10;E5RHB8;E5RJX6;E5RG91;Q8NEZ2-3;Q8NEZ2-2;Q8NEZ2 E5RJ10 VPS37A Vacuolar protein sorting-associated protein 37A 1 SASSSAAGS(1)PGGLTSLQQQK;SASSSAAGS(1)PGGLTSLQQQK 241.32 1.9508999999999998e-85 11927100.0 3246.1 2807.1000000000004 3393.3 2904.8999999999996 3869.1 3968.3 3064.6 3184.1000000000004 3317.9 3744.2 3530.7 True False 3575.64168234748 3043.6641685183067 3623.5897435705424 3084.3290754934296 3597.347763670382 3935.9834804856714 3181.225030013467 3120.590627621871 3178.460201308053 3507.7905730108287 3096.4462829513463 1.1547565678870404 0.9829539705811622 1.1702414356488544 0.9960867373916246 1.1617665655874405 1.2711292626507729 1.0273793695465998 1.0077974369532778 1.0264864657295252 1.1328439935561916 1.0 11.59639770310832 -7.968420486994671 24.999900828477408 1.0127457824046309 1.11751506002152 0.169861285267637 0.0838686048706786 178.64578484345998 141424.4701459854 0.011369168353816163 0.015708686905542703 1.0754234767723413e-08 7.968420486994671 0.10476927761688914 SAST(ph)DLGTADVVLGR ddPTM_A549_PD325901_60min_R1 2 SASTDLGTADVVLGR 15 0 H7C0E9;B5MCU0;A0A0U1RRA6;B5MCG9;Q9Y2K5-3;Q9Y2K5-2;Q9Y2K5 H7C0E9 R3HDM2 R3H domain-containing protein 2 1 S(0.003)AS(0.255)T(0.741)DLGT(0.001)ADVVLGR;SAS(0.191)T(0.809)DLGTADVVLGR 278.36 4.505599999999999e-106 27696000.0 5658.299999999999 6344.8 5874.5 4028.3 7278.1 6285.9 6491.3 7160.6 6562.200000000001 6420.9 7649.7 True False 6232.726450579695 6879.4985630775345 6273.178896238217 4277.11894206692 6766.9113640819405 6234.709714483504 6738.329973675653 7017.776215617971 6286.413554665208 6015.483278202351 6708.835395443661 0.929032549347191 1.0254385683318121 0.9350622763078489 0.6375352337563307 1.0086566393740592 0.9293281690467229 1.0043963782822907 1.046049843521892 0.9370349970033036 0.8966508974549886 1.0 12.71184663155817 SASVS(ph)SISLTK ddPTM_A549_MK2206_60min_R1 1 SASVSSISLTK 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 SAS(0.095)VS(0.855)S(0.05)ISLTK 220.5 4.8212999999999996e-32 15716000.0 5087.1 4888.6 4505.2 3225.5 5009.9 2939.8 2653.2 3203.4 4479.3 4556.5 4637.9 True False 5945.678112346034 5137.408859101151 5144.105104184691 4015.7476447981985 4272.9503465743965 3250.887684718694 3135.2520964229216 3657.4917600010576 3464.7457019722624 3527.1834853733153 3486.181430471777 1.7054987615895307 1.4736493098713792 1.4755701063695217 1.1519043758588194 1.2256821487331908 0.9325067411304405 0.8993370422487263 1.0491398204441982 0.9938512297976948 1.0117613083883559 1.0 11.767431937898122 -6.161630803643052 0.879327477731308 0.9895947432447338 1.7086411851078755 0.9145423890970089 0.07399569249604143 0.15898060580320508 0.18163086780416277 0.011019859204940552 0.08127843098595502 6.892379727207601e-07 6.161630803643052 0.7190464418631417 up SASVVSSDSIS(ph)TSADNFSPDLR ddPTM_A549_MK2206_60min_R1 1 SASVVSSDSISTSADNFSPDLR 22 0 Q13614 Q13614 MTMR2 Myotubularin-related protein 2 1 SASVVSSDSIS(0.33)T(0.33)S(0.33)ADNFS(0.009)PDLR 151.62 1.8444000000000003e-27 4766600.0 794.94 985.47 584.75 502.7 1232.9 1050.4 795.05 637.95 1137.9 1074.1 1254.5 True False 929.1064375829753 1035.6262137173037 667.6763428198525 625.8615225670607 1051.542043212754 1161.5526308009107 939.500293706108 728.3813661399365 880.1674668529085 831.4600640051518 942.9730275613628 0.9852948180137793 1.098256454265243 0.7080545501354802 0.6637109485364718 1.1151348050030268 1.2317983620431012 0.9963172500657461 0.7724307534263359 0.9333962278105911 0.8817432097240402 1.0 9.881072694969918 SASVVSSDSISTSADNFS(ph)PDLR ddPTM_A549_MK2206_60min_R1 1 SASVVSSDSISTSADNFSPDLR 22 0 Q13614 Q13614 MTMR2 Myotubularin-related protein 2 1 SASVVSSDSIS(0.001)T(0.001)S(0.001)ADNFS(0.997)PDLR 167.92 5.2588e-40 6324800.0 788.54 877.24 668.88 971.49 1190.1 1105.8 1037.1 952.23 1376.4 1151.0 1246.5 True False 921.6262740479523 921.8877690050109 763.7372418731811 1209.505093611843 1015.0378665159363 1222.8150220293664 1225.5276455601586 1087.2115185820714 1064.647597659147 890.9883005957826 936.9596483501308 0.9836349683476991 0.9839140571617363 0.8151228745208262 1.2908827992129979 1.0833314628898818 1.3050882438561697 1.3079833776386849 1.160361089718768 1.1362790270998957 0.950935616239933 1.0 9.871843107052246 -6.251486654665396 24.984169423428852 1.1205844223084487 0.9331929855302662 0.38613998785895154 0.1220122119317373 683.0177275766382 1714565.119007037 0.018061009594427472 0.04714817428274873 5.604196381049301e-07 6.251486654665396 -0.18739143677818249 SASVVSSDSISTSADNFS(ph)PDLR ddPTM_A549_PD325901_60min_R1 2 SASVVSSDSISTSADNFSPDLR 22 0 Q13614 Q13614 MTMR2 Myotubularin-related protein 2 1 SASVVSSDSISTSADNFS(1)PDLR;SASVVSSDSISTSADNFS(1)PDLR 380.65 2.9972999999999983e-296 27961000.0 5770.8 6487.7 5429.0 7009.6 6265.6 5792.4 5317.2 5883.4 6177.6 7047.0 6417.9 True False 6356.647367761573 7034.441247585129 5797.444587229085 7442.567072043359 5825.525871146562 5745.2286148641 5519.5489556834855 5766.050971561987 5917.976955182681 6602.051217351457 5628.538986420105 1.1293601027012807 1.2497810292434721 1.0300087822464223 1.3222911114233966 1.0349978715971808 1.0207317793703712 0.9806361773455636 1.0244312041674857 1.0514232857693442 1.1729600227128445 1.0 12.458544771694816 -6.958663506482455 24.548417595076618 1.0212762621802531 1.1769628899891778 0.3900916296835468 0.08329338109697652 65.1164146437824 38670.19268703042 0.008912928817701907 0.016843841905611116 1.0998576845694151e-07 6.958663506482455 0.15568662780892462 SAT(ph)FPNAGPR ddPTM_A549_MK2206_60min_R1 2 SATFPNAGPR 10 0 Q86X27;Q86X27-3 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.341)AT(0.659)FPNAGPR;S(0.331)AT(0.669)FPNAGPR 129.39 1.4279e-06 99289000.0 10477.9 9176.0 8297.7 7893.5 11476.5 8928.7 8063.6 9460.8 12607.8 13033.900000000001 13566.8 True False 12246.313359939944 9643.019206135119 9474.4386315798 9827.407854352681 9788.322052827623 9873.52910760862 9528.651743070961 10801.89737248486 9752.153430519465 10089.53293756332 10197.789135368277 1.2008792491567524 0.9455989997568112 0.9290679093098982 0.9636802373436976 0.959847465258864 0.9682029091349762 0.9343840725264073 1.0592391379246504 0.9563007531403798 0.9893843463158597 1.0 13.315968791631928 -5.257142834136291 24.993939135591646 0.9735608971833789 1.2008793391694035 0.7847886150837551 0.034639435050977475 145.6260492733151 847106.7359072383 0.004699620635570631 0.05045157437866136 5.531681490655706e-06 5.257142834136291 0.22731844198602458 SAT(ph)LETKPESK ddPTM_A549_MK2206_60min_R1 2 SATLETKPESK 11 1 A0A2R8YFL3;A0A2R8Y7R1;A0A2R8Y4U4;P15260 A0A2R8YFL3 IFNGR1 Interferon gamma receptor 1 1 S(0.001)AT(0.916)LET(0.082)KPES(0.001)K;S(0.001)AT(0.999)LETKPESK 113.72 9.5282e-06 25300000.0 8409.8 8092.9 7509.4 6830.4 10576.599999999999 8584.6 8079.9 9274.5 12424.8 11496.2 13005.7 True False 9829.16864013045 8504.794042429266 8574.345838001533 8503.848306628312 9020.796150737302 9493.016674003706 9547.91324208035 10589.18877696503 9610.602638328519 8899.200435542341 9776.025750940464 1.00543604226747 0.8699643657967141 0.8770788924299501 0.8698676254827001 0.9227467664832504 0.971050702591538 0.9766661305246492 1.0831793048362561 0.9830786950826075 0.9103086123403704 1.0 13.255032370013613 -7.340707554539165 2.1887576415117294 0.9988093370414081 0.9007278880039903 0.3656991590567771 0.05149527763660198 0.1899021666891952 1.7771415185054034 0.006618149633992203 0.011614867545575355 4.563441057607316e-08 7.340707554539165 -0.09808144903741778 SAT(ph)LETKPESK ddPTM_A549_PD325901_60min_R1 1 SATLETKPESK 11 1 A0A2R8YFL3;A0A2R8Y7R1;A0A2R8Y4U4;P15260 A0A2R8YFL3 IFNGR1 Interferon gamma receptor 1 1 S(0.101)AT(0.899)LETKPESK 75.764 0.00051103 20182000.0 3189.6 3579.6 3885.5 3659.7 3936.4 4228.3 4163.5 4600.7 4413.8 3614.8 5295.1 True False 3513.4058439405835 3881.265454607291 4149.193395409582 3885.751357218254 3659.92084384278 4193.8661266883955 4321.94427085462 4508.935429320671 4228.303335402958 3386.5609110943733 4643.836268404476 0.7565740135682508 0.8357886088737603 0.8934839980555898 0.8367545995658705 0.7881244368463171 0.903103788396338 0.9306840338579699 0.9709505608538274 0.910519469467797 0.7292593268491622 1.0 12.18110139146396 -7.564874197164269 2.4992318324315317 0.956659768249682 0.8278205467932644 0.10102726960992825 0.07865246265708124 0.1380338270729304 1.7449350585527863 0.007105580573050626 0.011307787870806106 2.7234901119291376e-08 7.564874197164269 -0.12883922145641757 SAT(ph)PEPVTDNR ddPTM_A549_MK2206_60min_R1 1 SATPEPVTDNR 11 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 SAT(1)PEPVTDNR 114.86 2.3341e-05 4209500.0 782.26 579.35 508.78 560.42 783.09 566.47 684.3 1046.1 791.91 757.97 960.91 True False 914.2863635792111 608.8364403960753 580.9326544675237 697.7229251582096 667.8984983530503 626.4134794076462 808.6284522773276 1194.3878785468892 612.5436494204125 586.7440505669728 722.2895272331522 1.2658170015028933 0.8429257485268028 0.8042933374555228 0.9659878744621302 0.9246963622905408 0.8672609193258348 1.1195350642489734 1.6536137290017021 0.8480583288627497 0.8123391361004382 1.0 9.496433442088819 -7.73370141781004 24.98458564675649 1.0054116702298086 0.9341294533949107 0.03176244036916143 0.24045864929676 983.4068788632316 885788.0136451181 0.03813102761328737 0.05655077171935395 1.8462843235329613e-08 7.73370141781004 -0.07128221683489788 SAT(ph)PEPVTDNR ddPTM_A549_PD325901_60min_R1 2 SATPEPVTDNR 11 0 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.019)AT(0.76)PEPVT(0.22)DNR;S(0.017)AT(0.953)PEPVT(0.029)DNR 73.781 0.0015546 8528600.0 1757.29 1567.97 1416.67 1619.1599999999999 1757.62 1392.41 1636.5700000000002 1210.8600000000001 1521.45 1626.06 1564.35 True False 1935.6887871514755 1700.1083346911942 1512.8137453287586 1719.1718358208348 1634.170834659827 1381.0706746120643 1698.8505669154672 1186.708447398706 1457.5087474848963 1523.3902940948647 1371.9448672316933 1.4109085819587657 1.23919581267261 1.1026782354463778 1.2530910511657622 1.191134479009534 1.006651730399914 1.2382790354713038 0.8649826066212437 1.0623668503719494 1.1103874000190384 1.0 10.422006791413635 -2.0000000000163256 0.2563494708992485 1.0059210485487466 3.41571783930934 0.5178954771626743 0.10024301495538614 22.67981438645713 0.27724569590446807 0.03981812397922229 24.154114416518286 0.009999999999624089 2.0000000000163256 2.4097967907605935 SAT(ph)PEPVTDNRDVEDMELS(ph)DVEDDGSK ddPTM_A549_PD325901_60min_R1 1 SATPEPVTDNRDVEDMELSDVEDDGSK 27 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 2 S(0.484)AT(0.513)PEPVT(0.011)DNRDVEDMELS(0.965)DVEDDGS(0.026)K 53.32 0.0032316000000000003 3119800.0 458.94 577.34 279.39 390.78 267.06 423.85 425.89 378.52 382.07 461.57 491.81 True False 505.53125094622885 625.9944679749065 298.3510855085531 414.9175930742272 248.30262690698436 420.39830612701985 442.0974770059502 370.97012165680445 366.012926584215 432.4263914279712 431.3204878404572 1.1720548065716316 1.4513441527184259 0.6917155431274374 0.9619705179126634 0.5756801123688564 0.974677340814199 1.0249860358348648 0.8600799918273857 0.8485869252739994 1.0025639950308205 1.0 8.752616435881489 -5.75569444505468 24.99999588710272 0.8989881190694138 1.3116995348528413 0.5580052951042762 0.14679861466977384 72.35173230842189 314840.1551040584 0.019027559313220036 0.06985006465799108 1.755114907182815e-06 5.75569444505468 0.4127114157834275 SAT(ph)PVNCEQPDILVSSTPINEGQTVLDK ddPTM_A549_MK2206_60min_R1 2 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 A0A2R8Y7M0;P82094;P82094-2;F8WF45 A0A2R8Y7M0 TMF1 TATA element modulatory factor 1 S(0.477)AT(0.523)PVNCEQPDILVSSTPINEGQTVLDK;S(0.475)AT(0.525)PVNCEQPDILVSSTPINEGQTVLDK 83.633 1.9418e-06 14093600.0 851.18 1052.21 889.47 857.81 1409.13 971.5 674.64 823.48 1280.85 1227.52 1227.21 True False 994.8383746469884 1105.762994647716 1015.6102208601517 1067.9734885085545 1201.8488436632233 1074.3034851704922 797.2133553183936 940.2108118017321 990.7395200971512 950.2223794503344 922.4598877270471 1.0784624761281305 1.1987111953153107 1.1009803617180887 1.1577451797281448 1.3028738264431141 1.1646072631055966 0.8642254974172779 1.0192430308470362 1.0740190801557192 1.030096150621459 1.0 9.849342368117997 -7.574088432135229 24.99991727453283 1.022409115269294 1.1720621625856096 0.5563700969372598 0.07391474853448801 66.45116214671789 32440.329354815647 0.01151572457006072 0.017080581961994034 2.6663156873326093e-08 7.574088432135229 0.14965304731631557 SAT(ph)PVNCEQPDILVSSTPINEGQTVLDK ddPTM_A549_PD325901_60min_R1 1 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 A0A2R8Y7M0;P82094;P82094-2;F8WF45 A0A2R8Y7M0 TMF1 TATA element modulatory factor 1 S(0.428)AT(0.572)PVNCEQPDILVSSTPINEGQTVLDK 92.238 1.3333000000000001e-09 9422100.0 738.25 1015.7 859.32 712.76 889.73 705.0 831.23 911.36 832.15 777.63 805.09 True False 813.1965965290747 1101.29660359946 917.6386227109408 756.7855664045919 827.2384342018685 699.2587137420048 862.8629125165095 893.182209851911 797.177629379576 728.5303090888343 706.0690338860006 1.1517239214605897 1.559757687627569 1.2996443388269303 1.0718294247227669 1.1716112653305109 0.9903545973309242 1.2220659327991776 1.2650069143184106 1.1290363847174263 1.0318117267927944 1.0 9.46366543556017 -2.0000000000131872 0.10537674134515601 0.9191511912219226 2.1699103938760786 0.3077156861395832 0.1309160394142971 82.65628996024066 0.5925428653154757 0.7219775877493818 15.060238081585627 0.009999999999696352 2.0000000000131872 1.250759202654156 SAT(ph)RPSPS(ph)PER ddPTM_A549_MK2206_60min_R1 3 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.455)AT(0.496)RPS(0.184)PS(0.866)PER;S(0.455)AT(0.502)RPS(0.152)PS(0.89)PER;S(0.041)AT(0.919)RPS(0.042)PS(0.999)PER 101.38 0.00051959 217265000.0 4717.36 4740.34 4877.31 3731.3 5566.349999999999 4610.6 4148.91 4370.12 6295.83 6131.889999999999 7062.67 True False 5513.535039621132 4981.6030583708125 5568.985897560829 4645.468667504425 4747.547288699255 5098.490631731417 4902.713242639087 4989.597892931203 4869.83455737459 4746.691790217443 5308.814119224238 1.0385624577917616 0.9383645662656502 1.0490075132588383 0.8750482806851888 0.8942764206995818 0.9603822091394763 0.9235044084300142 0.9398705211514015 0.9173111824993045 0.89411527388551 1.0 12.374173913038758 SAT(ph)RPSPS(ph)PER ddPTM_A549_PD325901_60min_R1 2 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.012)AT(0.883)RPS(0.107)PS(0.998)PER;S(0.214)AT(0.429)RPS(0.358)PS(1)PER 104.41 0.00040389 301020000.0 7187.4 7387.6 6890.099999999999 6595.2 8419.3 6421.5 6327.2 6449.5 7060.7 7948.0 8996.8 True False 7917.05955691577 8010.178978784452 7357.703619537136 7002.570525214046 7827.9574130082065 6369.205433041536 6567.9850583766865 6320.859662965127 6763.963333245655 7446.1619235858325 7890.250635414139 1.0033977274918624 1.0151995606872148 0.9325056908221964 0.8874965889909908 0.9921050388277479 0.8072247292696086 0.8324177978450173 0.8010974498826376 0.8572558269425155 0.9437167800684195 1.0 12.945855413129717 -5.851574593203658 3.89993615351004 0.9076302224665591 1.0101547680111786 0.3027379683216356 0.06548422256001661 0.2701298455887999 7.693917836977331 0.0111694559908623 0.039752446868363656 1.4074254721445834e-06 5.851574593203658 0.10252454554461954 SAT(ph)RPSPS(ph)PERSSTGPEPPAPTPLLAER ddPTM_A549_MK2206_60min_R1 1 SATRPSPSPERSSTGPEPPAPTPLLAER 28 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.325)AT(0.358)RPS(0.34)PS(0.877)PERS(0.034)S(0.033)T(0.031)GPEPPAPT(0.002)PLLAER 49.806000000000004 0.0049685 11927000.0 467.78 626.08 539.21 489.07 798.65 608.02 309.76 526.34 987.78 693.24 1075.1 True False 546.7298278770271 657.9447977961069 615.6780860400045 608.8921719551867 681.1696429652577 672.3602728289886 366.03938240161483 600.950306848647 764.0494071605292 536.6366025239098 808.1229987494789 0.6765428390518005 0.8141641789854221 0.7618618539414529 0.7534647236836597 0.8429034243788708 0.8320023979882086 0.4529500867665423 0.7436371787198 0.945461777901197 0.6640531247771964 1.0 9.65843108198575 -8.790177469023206 4.695412856354416 0.9758943472884024 0.7356879727246353 0.03225946113517708 0.13794174315498475 0.11191712025268094 5.77020495628385 0.017992675726255927 0.01940405711803953 1.6211475002812273e-09 8.790177469023206 -0.24020637456376714 SAT(ph)SPEGK ddPTM_A549_MK2206_60min_R1 1 SATSPEGK 8 0 P13639 P13639 EEF2 Elongation factor 2 1 SAT(0.712)S(0.287)PEGK 78.113 0.0046006 16133000.0 2682.8 2523.5 1673.4 1468.4 1407.5 907.96 921.95 1036.3 1765.3 3638.1 3971.8 True False 3135.5910518373803 2651.935371260023 1910.7132827272185 1828.1580659189813 1200.4586145039752 1004.0397245449304 1089.4563810859013 1183.1986985356477 1365.462368604833 2816.250683229816 2985.49244389655 1.050275996594025 0.8882740188077043 0.639999369830402 0.6123472426320864 0.40209735481265624 0.3363062353741872 0.3649168107302207 0.3963160921591154 0.45736587657300654 0.9433119447303486 1.0 11.543753202005346 -5.609063563334432 2.5815407132940256 0.6255500838774682 1.0420044779703757 0.31796890725305826 0.21840420728770135 0.38452147258460795 4.697012499675047 0.03905010406098048 0.2484824743428695 2.460007531129514e-06 5.609063563334432 0.4164543940929074 SAT(ph)SPEGK ddPTM_A549_PD325901_60min_R1 1 SATSPEGK 8 0 P13639 P13639 EEF2 Elongation factor 2 1 S(0.023)AT(0.489)S(0.489)PEGK 96.618 0.0026285 34258000.0 8799.0 8588.9 7353.9 6585.5 8147.7 6474.9 4672.3 6453.1 8197.8 8713.0 10778.0 True False 9692.268002518556 9312.71674574717 7852.97987659311 6992.271378244347 7575.433660039074 6422.170561146252 4850.1069332806655 6324.3878581409845 7853.274974617423 8162.85969303012 9452.374327371237 1.0253791975263462 0.9852251321427611 0.8307944231380299 0.7397370370740428 0.8014318305299118 0.6794240620104913 0.5131099092464221 0.6690792851725579 0.8308256425982514 0.8635777012546921 1.0 13.206461047866021 -5.713717359816709 4.606022355469067 0.8341372480346237 1.0136797833084912 0.21858999293713643 0.13243989067443784 0.3100151667598856 13.848610825007475 0.023556921825396766 0.09542943581929068 1.933226057160233e-06 5.713717359816709 0.17954253527386743 SAT(ph)TTGSPGTEK ddPTM_A549_PD325901_60min_R1 1 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SAT(0.484)T(0.484)T(0.033)GSPGTEK 207.47 5.4974e-26 13105000.0 3773.9 4611.4 4614.5 4972.2 4952.1 4700.5 4874.9 5396.7 5582.2 5920.6 5642.8 True False 4157.023549801658 5000.018861709709 4927.6677192427005 5279.321501314483 4604.281579817554 4662.220686445809 5060.416987147636 5289.058584870752 5347.599546623404 5546.772305584083 4948.771372656377 0.8400112344592455 1.0103555984292367 0.9957355772120973 1.0667943826389932 0.9303888244378707 0.9420966004221055 1.0225602692232134 1.068761958593314 1.080591351657643 1.120838262246638 1.0 12.272854677613854 -7.91905285643073 5.885039777279282 1.041617187256275 0.971141671342846 0.3566541626782813 0.061257747218670534 0.2318260971822162 13.151417184631988 0.009272535362758594 0.01285928889543266 1.2048892886745238e-08 7.91905285643073 -0.07047551591342893 SAT(ph)YSVGMQK ddPTM_A549_MK2206_60min_R1 5 SATYSVGMQK 10 0 Q8IUC4;Q8IUC4-2;A8MT19 Q8IUC4 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.016)AT(0.774)Y(0.121)S(0.088)VGMQK;S(0.002)AT(0.943)YS(0.054)VGMQK;S(0.002)AT(0.624)Y(0.011)S(0.363)VGMQK;S(0.001)AT(0.995)YS(0.005)VGMQK;S(0.114)AT(0.882)YS(0.004)VGMQK 156.51 1.5559e-08 289416000.0 31886.8 32977.7 34123.9 31833.1 46466.899999999994 36697.4 34154.9 35841.200000000004 52915.1 50669.3 48434.9 True False 37268.51228258837 34656.12407085463 38963.182137238764 39632.21092904218 39631.680564330214 40580.69451023739 40360.403221813394 40921.79985907155 40929.91433805109 39223.069938642846 36407.177594764355 1.0236583757579683 0.9519036179239135 1.0702060613136346 1.0885823496172802 1.088567782030694 1.114634453731267 1.1085836883883453 1.124003632321019 1.1242265136184888 1.0773444284866356 1.0 15.151935282159254 -5.808447380974835 9.813096774742409 1.0757797342924187 0.9878813645381569 0.4872279513395007 0.038060796936121716 0.32248949449163217 65.0688484329288 0.007386269520318511 0.023117231136931326 1.5543636057203544e-06 5.808447380974835 -0.0878983697542618 SAT(ph)YSVGMQK ddPTM_A549_PD325901_60min_R1 3 SATYSVGMQK 10 0 Q8IUC4;Q8IUC4-2;A8MT19 Q8IUC4 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.002)AT(0.971)YS(0.027)VGMQK;S(0.252)AT(0.747)YSVGMQK;S(0.009)AT(0.991)YSVGMQK 258.45 2.7381e-58 403610000.0 82901.0 85801.0 96177.0 91466.0 102744.0 93699.0 97465.0 102323.0 109153.0 101592.0 99170.0 True False 91317.0484915093 93031.75138863563 102704.14957928397 97115.64708564222 95527.61588755775 92935.94640980447 101174.08390989454 100282.08749415934 104565.67899978222 95177.4637822007 86972.71869042536 1.0499504886876923 1.0696658997147952 1.1808777640360282 1.1166219539637487 1.0983629961894497 1.068564347638768 1.1632852856999696 1.1530292372612605 1.2022813656311935 1.094336996880363 1.0 16.408275311748458 -11.033742124679332 1.3513984329274706 1.000547447173299 1.1314386879597147 0.13968689339824236 0.05429258397047508 0.31531717201443304 1.0332407303487252 0.03706134120534192 0.00847379686473669 9.252474041437957e-12 11.033742124679332 0.13089124078641579 SATDGNTST(ph)T(ph)PPTSAKK ddPTM_A549_MK2206_60min_R1 1 SATDGNTSTTPPTSAKK 17 1 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 2 S(0.001)AT(0.003)DGNT(0.014)S(0.061)T(0.629)T(0.655)PPT(0.333)S(0.304)AKK 51.695 0.007541199999999999 6102500.0 1016.6 700.49 1041.1 1237.8 1026.9 1318.1 512.64 823.67 1144.3 1613.1 1789.7 True False 1188.1772265162813 736.1419489652995 1188.743634903374 1541.0610555669537 875.8443703262041 1457.5804671160315 605.7800522803585 940.4277448835824 885.1178770716086 1248.6995896533947 1345.2680967928025 0.8832270900863293 0.5472083599695146 0.8836481276389503 1.1455419624095249 0.6510556315237596 1.0834869797261886 0.45030433244092644 0.699063441053584 0.6579490580218034 0.9282161619905855 1.0 10.393677998983208 -10.981204061527537 1.2884458225839721 0.9984288802831168 0.7662788164984954 0.10683366851425846 0.20296411339823267 0.6760810982679804 2.018420748005008 0.13475020694434786 0.03188896690354607 1.0442294528503414e-11 10.981204061527537 -0.23215006378462144 SATDGNTST(ph)TPPTS(ph)AK ddPTM_A549_MK2206_60min_R1 1 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 2 SATDGNT(0.01)S(0.076)T(0.895)T(0.019)PPT(0.168)S(0.832)AK 108.34 9.8464e-07 9003000.0 1252.0 1061.8 709.63 938.93 1699.7 940.86 984.35 1285.9 1698.4 1422.9 1041.2 True False 1463.3069915388392 1115.8410846855134 810.2662046263385 1168.9678921501693 1449.6763815789748 1040.4211807076779 1163.1936533672188 1468.1802629035901 1313.7151117874869 1101.4659017530314 782.6413043418825 1.8697032515672345 1.425737535822769 1.0352970129881987 1.4936189614131676 1.8522870867363657 1.3293716737612777 1.486241074824616 1.8759299499764743 1.6785660359341508 1.4073700118335133 1.0 9.612207441077496 -10.787787387446814 1.0498429562881166 1.0018124554227448 1.5535996871522173 0.1531845711410551 0.2694624424804145 0.4233862548685263 0.8329622003296155 0.1702516495637887 0.043397258442832175 1.6300938636308017e-11 10.787787387446814 0.5517872317294725 SATDGNTST(ph)TPPTSAK ddPTM_A549_PD325901_60min_R1 1 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SATDGNT(0.001)S(0.003)T(0.498)T(0.498)PPTSAK 243.01 1.6849999999999997e-65 140440000.0 26652.0 25670.0 27644.0 27900.0 32503.0 31866.0 31329.0 33042.0 30411.0 33643.0 32528.0 True False 29357.691419834602 27833.300988872845 29520.088076876207 29623.31963450265 30220.101409262727 31606.49386113863 32521.242238886618 32382.95138905246 29132.931427101226 31518.775238449718 28527.262211981022 1.0291100212029745 0.9756737531294986 1.0348027040771621 1.0384214024597602 1.059341102721408 1.1079399637538432 1.14000572495275 1.135158051565569 1.0212312422629126 1.1048650587020687 1.0 14.800053676321006 -4.473007382430649 16.369904183946108 1.0358068122818191 1.0459022925902102 0.0 0.05753846862734389 14440125.8370168 0.0 0.00824996331291586 0.0 3.3650584917338724e-05 4.473007382430649 0.010095480308391025 SATDGNTSTT(ph)PPT(ph)SAK ddPTM_A549_PD325901_60min_R1 2 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 2 SATDGNT(0.006)S(0.026)T(0.09)T(0.944)PPT(0.871)S(0.064)AK;SATDGNT(0.001)S(0.011)T(0.093)T(0.896)PPT(0.783)S(0.216)AK 110.84 1.6487e-06 22773000.0 5296.200000000001 6451.7 6107.2 6591.4 6919.2 6206.1 6563.799999999999 6193.0 7326.200000000001 7600.4 6671.700000000001 True False 5833.866325143627 6995.407401243123 6521.671317576988 6998.535807844469 6433.219261944151 6155.5595792259 6813.589000849178 6069.475756685482 7018.305291546772 7120.509446907618 5851.123195390861 0.9970506739183295 1.1955665891214964 1.1146016072118157 1.1961012568249232 1.0994845001745697 1.0520304176939659 1.1644924868812343 1.037318059114979 1.1994800070310163 1.2169474490840833 1.0 12.514497879081166 -11.050579422478899 1.3483248701301476 0.9998731900418475 1.1280343089667062 0.0 0.09157013924831514 0.39222041450139494 1.269495209246469 0.04554742696161039 0.010105894694676439 8.900626511240184e-12 11.050579422478899 0.1281611189248587 SATDGNTSTT(ph)PPTS(ph)AK ddPTM_A549_MK2206_60min_R1 1 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 2 SATDGNT(0.017)S(0.109)T(0.371)T(0.5)PPT(0.299)S(0.704)AK 86.777 2.1914e-05 10396000.0 1127.5 1082.1 1188.5 853.63 1511.2 1155.9 1172.2 675.98 1480.2 1576.1 1234.7 True False 1317.7944352715988 1137.1742679772037 1357.0471713405636 1062.7693883209074 1288.904481874535 1278.2165707756778 1385.1735667974328 771.8022351019268 1144.9370633936865 1220.0579153510103 928.0899140135625 1.4198995327648194 1.225284588062645 1.4621936418551926 1.14511468368934 1.3887711335000024 1.377255103708625 1.492499321328893 0.8316028689119536 1.2336488589153605 1.3145902104191827 1.0 9.858120771224188 -9.886567764767898 0.23114774021418297 0.8905499202795695 1.3934425793330334 0.07931679363320798 0.1874817149289967 3.1656152878828205 0.3675335460017768 0.5111788561966043 0.18623979776105276 1.2984709422191422e-10 9.886567764767898 0.5028926590534639 SATDGNTSTT(ph)PPTSAK ddPTM_A549_MK2206_60min_R1 4 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SATDGNTS(0.001)T(0.119)T(0.88)PPTSAK;SATDGNT(0.02)S(0.05)T(0.076)T(0.855)PPTSAK;SATDGNTS(0.001)T(0.012)T(0.985)PPT(0.002)SAK;SATDGNT(0.001)S(0.006)T(0.071)T(0.92)PPT(0.001)SAK 313.56 5.416199999999999e-144 205502100.0 29495.3 29576.659999999996 27536.699999999997 25929.8 39780.200000000004 27184.899999999998 24472.41 26829.8 39934.2 39082.5 40061.3 True False 34473.38554914977 31081.98566187103 31441.81812625468 32282.60216403295 33928.5852765123 30061.588074123836 28918.730120994 30633.0063128165 30889.167461813373 30253.73610602492 30112.9735743675 1.144801773362359 1.0321792228559044 1.0441286393921025 1.072049629516238 1.1267098944154983 0.9982935760190949 0.9603412313159916 1.0172693917843987 1.0257760624512544 1.0046744812932469 1.0 14.878097556863974 -7.28325266722029 24.866801165074772 1.0076935882496698 1.0782202782253307 0.5863893659844801 0.03427432129650504 471.3821192586849 537366.9513506934 0.005109766972205445 0.008172892007225145 5.208915745829144e-08 7.28325266722029 0.07052668997566092 SATDGNTSTT(ph)PPTSAK ddPTM_A549_PD325901_60min_R1 1 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SATDGNTS(0.001)T(0.075)T(0.923)PPT(0.001)SAK 176.23 2.7402999999999997e-28 130050000.0 8981.7 8385.3 10177.0 8842.0 9843.3 9240.1 9956.8 10005.0 9977.1 9854.5 10918.0 True False 9893.51557202193 9091.958659212905 10867.672419272501 9388.150258361016 9151.940565541516 9164.851689145387 10335.711472570018 9805.442426229332 9557.79718329985 9232.285188220512 9575.155214904356 1.033248584484774 0.9495364257971167 1.1349865537799593 0.9804697728291386 0.9558007531090379 0.957149151470641 1.0794301753439783 1.0240504938203527 0.9981871801328622 0.9641917003966531 1.0 13.225080158222692 SATDGNTSTT(ph)PPTSAKK ddPTM_A549_MK2206_60min_R1 1 SATDGNTSTTPPTSAKK 17 1 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SATDGNT(0.007)S(0.03)T(0.171)T(0.79)PPT(0.001)S(0.001)AKK 62.966 0.0018728999999999998 5246300.0 767.58 963.41 929.26 741.99 1019.0 595.42 571.87 546.38 1066.8 1324.2 1371.2 True False 897.1287384707526 1012.4434539431824 1061.0430411778982 923.7775833091972 869.1064498611377 658.4269491921917 675.7713765948204 623.8310382185729 825.1715033295395 1025.062300303159 1030.6931968052145 0.8704129815269329 0.9822937194903393 1.0294460509361636 0.8962682456550427 0.8432251736550326 0.6388195354670848 0.6556474600681108 0.6052538623057075 0.8005985737436516 0.9945367869706433 1.0 10.009399238785884 -6.543365928120397 4.093378848292975 0.8376869177840623 0.9636035806757217 0.19838987681240272 0.13233281752865755 0.38090468603460115 14.550250635862756 0.022983056692447483 0.05152534413470069 2.8617656854283703e-07 6.543365928120397 0.12591666289165937 SATDGNTSTT(ph)PPTSAKK ddPTM_A549_PD325901_60min_R1 2 SATDGNTSTTPPTSAKK 17 1 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SATDGNT(0.004)S(0.024)T(0.159)T(0.809)PPT(0.002)S(0.002)AKK;SATDGNT(0.003)S(0.011)T(0.05)T(0.929)PPT(0.003)S(0.004)AKK 83.77600000000001 8.2001e-05 18139100.0 5877.9 5776.700000000001 6256.200000000001 6462.0 7617.7 8045.0 7242.0 7660.4 6761.1 8165.3 8574.0 True False 6474.620080918724 6263.522782330417 6680.783353586778 6861.143063733193 7082.659031638333 7979.484187311244 7517.598272974462 7507.607312532452 6476.954479358591 7649.741564501181 7519.45235506411 0.8610494189192216 0.8329759251831864 0.8884667444016032 0.9124524951757202 0.9419115511608221 1.0611789011386337 0.9997534285740372 0.9984247466474496 0.8613598668520813 1.0173269545819152 1.0 12.876411878293247 -6.280562314211328 1.8326859130339046 0.9527799556243529 0.8487427754175104 0.4541668168975894 0.05384428867581572 0.3618363865039832 2.3099982879045795 0.009687950124926624 0.03269369800328525 5.241283916931883e-07 6.280562314211328 -0.1040371802068425 SATES(ph)TPGERGEEKPLDGQEHR ddPTM_A549_MK2206_60min_R1 2 SATESTPGERGEEKPLDGQEHR 22 2 Q12873;Q12873-3 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 S(0.013)AT(0.011)ES(0.553)T(0.423)PGERGEEKPLDGQEHR;S(0.003)AT(0.012)ES(0.493)T(0.493)PGERGEEKPLDGQEHR 95.12299999999999 1.909e-07 12785800.0 2082.8 2918.7 2705.4 2462.6 2356.8999999999996 1873.56 1844.8899999999999 1786.9299999999998 2440.0 3054.7 3893.2 True False 2434.32572042899 3067.249363224344 3089.0664007949176 3065.9371105503146 2010.2031321665504 2071.818875631526 2180.082632357035 2040.2327997436116 1887.3438958793367 2364.6411484187124 2926.410993146193 0.8318468342725296 1.048126654256016 1.0555818741898086 1.0476782371754683 0.6869175713440631 0.7079726260200068 0.7449680299393702 0.6971791742588253 0.6449346658072275 0.8080345358040362 1.0 11.51491668439652 -6.750705795834729 24.973428354185483 0.7936549216971318 1.0038149851960763 0.509229064991827 0.10931834627316972 208.2104015821211 484431.9150293891 0.021726407151969846 0.044865690647849794 1.7753917774824095e-07 6.750705795834729 0.21016006349894445 SATLPYIKQEEFS(ph)PR ddPTM_A549_MK2206_60min_R1 4 SATLPYIKQEEFSPR 15 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 SATLPYIKQEEFS(1)PR;SATLPYIKQEEFS(1)PR;SATLPYIKQEEFS(0.999)PR;SATLPYIKQEEFS(1)PR 115.98 2.7186e-07 11439100.0 6886.2 7477.0 7935.7 7625.6 9623.5 6829.6 6134.4 5944.8 10647.5 11480.0 11092.0 True False 8048.422208574082 7857.547363150862 9061.101588226593 9493.872342326193 8207.895898173367 7552.303738878427 7248.941075040244 6787.493605186448 8235.858250563628 8886.660026793727 8337.550276373562 0.9653221799910708 0.9424287833582362 1.0867822427294245 1.1386884669504596 0.9844493437637669 0.9058180746783239 0.869432967088888 0.8140872774609145 0.9878031289240794 1.0658598427857398 1.0 13.025407840600224 -6.985697911092146 24.95462674984832 0.962445172539366 1.0345008677877499 0.19518936531161968 0.08172420705613727 380.895296136162 664591.1681122533 0.012500652475781674 0.02361716832400174 1.0334800294365353e-07 6.985697911092146 0.07205569524838384 SATLPYIKQEEFS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SATLPYIKQEEFSPR 15 1 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 SATLPYIKQEEFS(1)PR;SATLPYIKQEEFS(1)PR 129.46 8.198999999999999e-10 25306000.0 5353.5 4922.9 5470.799999999999 5411.2 5763.5 6789.0 5922.8 6373.0 6337.1 6620.9 6539.6 True False 5896.9833789616 5337.770059919051 5842.081386592907 5745.437534273142 5358.691642995597 6733.7126348857755 6148.195395080521 6245.88551547822 6070.773724858871 6202.855244070135 5735.270657939963 1.0281961795120793 0.9306919199234986 1.018623485276161 1.0017726933809312 0.9343398006120206 1.1740880311487236 1.0719974281543105 1.089030647024715 1.0584982099239615 1.0815279023463076 1.0 12.485645855934392 SATLSS(ph)TESTASEMQEEMKGSVEEPKPEEPK ddPTM_A549_MK2206_60min_R1 1 SATLSSTESTASEMQEEMKGSVEEPKPEEPK 31 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(0.042)AT(0.04)LS(0.045)S(0.203)T(0.203)ES(0.189)T(0.189)AS(0.045)EMQEEMKGS(0.045)VEEPKPEEPK 42.973 0.0097362 2989500.0 1003.9 1171.8 1031.3 817.35 1129.8 1212.1 1271.8 1029.8 1225.3 1663.9 1765.5 True False 1173.33377700147 1231.4396148375256 1177.553847541879 1017.6007866922354 963.6079166370096 1340.363617473137 1502.8695975541507 1175.7773036302324 947.7715064020294 1288.0238343712629 1327.0776246788255 0.8841485646217839 0.927933371746475 0.8873285372638742 0.7667982398079475 0.7261126996020436 1.010011466207583 1.1324654787378166 0.8859898484949512 0.7141794035080696 0.9705715855792427 1.0 10.374037045320346 -5.989410555288624 22.688499234923107 0.8763460184318083 0.9064385080245363 0.0 0.12415278184819226 520.0896040684036 1114259.2436230502 0.020111782613289324 0.062391511611952236 1.024682796160969e-06 5.989410555288624 0.030092489592728033 SATPEPVTDNRDVEDMELS(ph)DVEDDGSK ddPTM_A549_MK2206_60min_R1 3 SATPEPVTDNRDVEDMELSDVEDDGSK 27 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.004)AT(0.014)PEPVT(0.049)DNRDVEDMELS(0.915)DVEDDGS(0.018)K;SATPEPVTDNRDVEDMELS(1)DVEDDGSK;S(0.004)AT(0.004)PEPVT(0.004)DNRDVEDMELS(0.981)DVEDDGS(0.006)K 132.37 9.3514e-25 11320000.0 2205.81 2343.34 2332.21 2135.14 4046.3900000000003 2718.0 2696.8999999999996 2275.32 3395.99 3690.6800000000003 3784.59 True False 2578.096801123232 2462.605996785602 2662.9524471789437 2658.249395850076 3451.1713912204214 3005.616955937618 3186.89182076096 2597.85357787526 2626.8036872816688 2856.9528247114176 2844.7718536297 0.9062578420247612 0.865660279098837 0.9360864716730203 0.9344332454844713 1.2131628013743894 1.056540598186351 1.1202627081306158 0.9132027844554942 0.9233793859180933 1.004281879781036 1.0 11.474097239888087 -6.301727521740724 3.2510288250970962 0.9944029947603336 0.8952020340937785 0.24280321537730043 0.08712763392197827 0.3559971240230531 7.622126685910118 0.013686513489845974 0.036333991779736556 4.991975879815962e-07 6.301727521740724 -0.09920096066655504 SATPEPVTDNRDVEDMELS(ph)DVEDDGSK ddPTM_A549_PD325901_60min_R1 2 SATPEPVTDNRDVEDMELSDVEDDGSK 27 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 SATPEPVTDNRDVEDMELS(1)DVEDDGSK;SATPEPVTDNRDVEDMELS(0.999)DVEDDGSK 110.59 2.0322000000000002e-13 17836000.0 3167.6 2305.8 2802.1 3130.4 3871.2 3195.0 3340.4 3221.7 3154.9 2920.6 3514.4 True False 3489.1724201361253 2500.117858205804 2992.2673563961384 3323.7576983457757 3599.3002669149914 3168.9809792988744 3467.520749937017 3157.4406661252438 3022.310524460281 2736.192817567285 3082.1510796171365 1.132057556558697 0.811160061146765 0.9708373402538842 1.0783889603356664 1.1677883964604665 1.028171850580577 1.1250326996844526 1.0244276106405075 0.980584807943844 0.8877542816321561 1.0 11.589721865681675 -4.92611303971419 21.433031396504603 1.0091789602236363 5.8444969010088155 0.12320445055408769 0.0954842751716984 1207.3401196826237 363482.83697735996 0.011935486873533057 10629.66018832946 1.1854601522180578e-05 4.92611303971419 4.835317940785179 SATRPS(ph)PS(ph)PER ddPTM_A549_MK2206_60min_R1 2 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.051)AT(0.408)RPS(0.541)PS(1)PER;S(0.077)AT(0.087)RPS(0.874)PS(0.963)PER 103.11 0.00068887 193269000.0 5630.5 5962.1 5501.4 4540.2 6852.5 4943.9 5112.4 4830.5 7995.9 8404.0 8474.5 True False 6580.790747491562 6265.545423811924 6281.581243931822 5652.5492038173215 5844.506327451862 5467.060216504781 6041.256904022521 5515.238167785821 6184.841416828524 6505.530563168513 6370.0477656984995 1.0330834225337953 0.983594731824571 0.9861121101409863 0.8873637077346936 0.9174980380717741 0.8582447757996203 0.9483848671517888 0.8658079767445911 0.9709254379743781 1.0212687255187571 1.0 12.63708847520928 -8.977869209402702 16.522100223755405 0.9871759000032464 0.9330686071876211 0.22256472274562267 0.05168507128628624 4.619644628366003 3449.3061160008374 0.009271153127805461 0.009559528469221252 1.0522787266666112e-09 8.977869209402702 -0.05410729281562532 SATRPS(ph)PS(ph)PERSSTGPEPPAPTPLLAER ddPTM_A549_MK2206_60min_R1 1 SATRPSPSPERSSTGPEPPAPTPLLAER 28 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.1)AT(0.116)RPS(0.446)PS(0.646)PERS(0.243)S(0.232)T(0.217)GPEPPAPTPLLAER 59.788999999999994 0.00031464 15820000.0 386.78 746.62 766.19 795.3 900.01 924.44 688.83 432.42 1147.9 1143.3 974.9 True False 452.05900813689465 784.6197689281393 874.8472631126851 990.148535702373 767.6197212360381 1022.2636272063921 813.9814946400584 493.71685923071 887.9024828196278 885.0277359436651 732.8054241287948 0.6168881851199871 1.0707068248859437 1.1938329525231866 1.3511752275571975 1.0475082415617116 1.395000082623192 1.110774385448594 0.6737352685641917 1.2116483497310655 1.207725416328409 1.0 9.517286371886918 -5.26584773112709 4.479750148323691 1.112308576751283 0.5852524509451833 0.3877869229030584 0.1838586311747012 0.15554321492169515 7.8049117296622 0.024863448880694996 0.25648882765354425 5.421909557554565e-06 5.26584773112709 -0.5270561258060997 SATRPS(ph)PS(ph)PERSSTGPEPPAPTPLLAER ddPTM_A549_PD325901_60min_R1 2 SATRPSPSPERSSTGPEPPAPTPLLAER 28 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.122)AT(0.133)RPS(0.573)PS(0.802)PERS(0.231)S(0.072)T(0.067)GPEPPAPTPLLAER;S(0.127)AT(0.152)RPS(0.725)PS(0.863)PERS(0.048)S(0.044)T(0.041)GPEPPAPTPLLAER 83.185 7.877100000000001e-07 74484000.0 2149.3 2210.5 2233.5 1941.81 2585.5 2487.19 2117.3999999999996 2503.5 2380.3 2376.2200000000003 3209.2 True False 2367.4953537689667 2396.786592750424 2385.078741126574 2061.7511935295197 2403.9033994907804 2466.935149265216 2197.978815685738 2453.565728542243 2280.264268716224 2226.185063671757 2814.488744794932 0.8411813186843873 0.8515886223325643 0.8474287721126967 0.7325490987812574 0.8541172544877002 0.8765127072643386 0.7809513609712041 0.8717624943712518 0.8101877376249261 0.7909731626352481 1.0 11.458657163508782 -10.779623645854082 0.7304679708320521 1.0167919718444185 0.8274418284658301 0.0 0.07361235664035903 0.3607757851951841 0.2913861399059477 0.04222982280707698 0.007580168450928342 1.6610257079504088e-11 10.779623645854082 -0.18935014337858835 SATRPS(ph)PSPER ddPTM_A549_MK2206_60min_R1 1 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SAT(0.001)RPS(0.798)PS(0.201)PER 100.54 7.3989e-05 16275000.0 1315.2 1428.8 1329.9 1086.6 1669.8 1311.9 1248.5 1476.7 1823.4 2268.5 2053.1 True False 1537.1736064471888 1501.5198171017732 1518.4998175564283 1352.8170487793282 1424.1746319706845 1450.7243872312595 1475.3362891542363 1686.0267472040832 1410.402811371468 1756.0442744583252 1543.258607322626 0.9960570439415893 0.9729541179794456 0.9839568108360327 0.8765977668035225 0.9228360206209779 0.9400397187792767 0.9559877276263976 1.0925108333781746 0.9139121626662123 1.1378807583680726 1.0 10.591764122487943 -8.008940886833145 24.86848456142915 0.9708678533213294 0.9470706853800263 0.033639812136415315 0.07186878516818071 1304.5048523203266 3628399.8385162423 0.008986384106909044 0.012072210830168217 9.796233158977053e-09 8.008940886833145 -0.023797167941303154 SATRPS(ph)PSPER ddPTM_A549_PD325901_60min_R1 2 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.041)AT(0.041)RPS(0.914)PS(0.005)PER;S(0.02)AT(0.02)RPS(0.945)PS(0.014)PER 57.175 0.011426 25897100.0 1473.8 2308.35 1911.9699999999998 1619.19 2414.6000000000004 2147.3 1723.6399999999999 2214.39 2164.83 2656.1 2305.3 True False 1623.4190910457837 2502.88275565503 2041.727781809614 1719.2036888527014 2245.006825917788 2129.8131007350466 1789.2340634119994 2170.2222542946497 2073.8497234991137 2488.393392707138 2021.7627145007348 0.8029721190336027 1.2379705777060517 1.0098750793877458 0.850348894319802 1.1104205304687214 1.053443653629251 0.8849871701456532 1.0734307437411499 1.0257631662829638 1.2308038796341318 1.0 10.981397968994406 SATRPSPS(ph)PER ddPTM_A549_MK2206_60min_R1 8 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.013)AT(0.012)RPS(0.092)PS(0.883)PER;S(0.002)AT(0.006)RPS(0.383)PS(0.609)PER;S(0.002)AT(0.002)RPS(0.352)PS(0.645)PER;S(0.014)AT(0.014)RPS(0.055)PS(0.917)PER;S(0.002)AT(0.012)RPS(0.382)PS(0.605)PER;SATRPS(0.146)PS(0.854)PER;S(0.096)AT(0.096)RPS(0.201)PS(0.607)PER;S(0.004)AT(0.03)RPS(0.393)PS(0.572)PER 92.45700000000001 8.1776e-05 351789000.0 11577.07 11619.679999999998 9519.84 8586.44 11695.740000000002 9884.27 9997.25 10217.14 13547.6 16346.4 15105.100000000002 True False 13530.996383813545 12211.072080333934 10869.89646076126 10690.118185459936 9975.312139253096 10930.216890752587 11813.620918499953 11665.450883678957 10479.090231071683 12653.736886932156 11354.0867904481 1.1917291662062 1.0754781344992705 0.9573554140792567 0.9415216197266747 0.8785657819389815 0.9626680764804348 1.0404730152704529 1.0274230855354038 0.9229355406977751 1.1144654009142698 1.0 13.470924054253608 -5.485285971490255 2.4545888548206456 0.9646504721461542 1.1984149940016204 0.48185570319982474 0.06294515473356276 0.15958080515982415 1.578787405233887 0.006889892983397126 0.06305813976910314 3.2712522059329607e-06 5.485285971490255 0.23376452185546626 SATRPSPS(ph)PER ddPTM_A549_PD325901_60min_R1 5 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)AT(0.002)RPS(0.098)PS(0.897)PER;SAT(0.001)RPS(0.272)PS(0.727)PER;SAT(0.001)RPS(0.195)PS(0.804)PER;S(0.098)AT(0.089)RPS(0.129)PS(0.684)PER;SATRPS(0.003)PS(0.997)PER 135.47 3.9116e-08 332783000.0 6171.24 6787.71 6357.89 6584.23 7563.429999999999 7096.88 6694.61 6984.379999999999 6162.799999999999 6956.360000000001 8203.849999999999 True False 6797.739741773224 7359.73414317032 6789.37464849842 6990.922933228722 7032.200769217003 7039.085362243067 6949.377046981156 6845.071061759881 5903.798947714292 6517.134242420179 7194.8284584899375 0.944809147430312 1.0229200300787982 0.9436464938211169 0.9716594319881796 0.9773965855876615 0.9783534663619265 0.9658850224261918 0.9513876670238967 0.8205614604678693 0.905808148174808 1.0 12.812744574819304 -8.533082300581118 24.979202102468616 0.9137235268902536 0.9723306955437445 0.2900272570054939 0.04309491402959807 305.2976758743761 747392.4854400915 0.010940836749870939 0.012412115133713007 2.9303378816129014e-09 8.533082300581118 0.058607168653490915 SATS(ph)PEGK ddPTM_A549_MK2206_60min_R1 1 SATSPEGK 8 0 P13639 P13639 EEF2 Elongation factor 2 1 SAT(0.021)S(0.979)PEGK 79.148 0.0041486000000000006 17245000.0 2397.5 2287.7 1856.6 1291.4 1399.4 660.59 1024.3 746.09 1496.5 2721.7 3170.5 True False 2802.1393867526886 2404.134158443258 2119.8937974849714 1607.7930579731485 1193.5501137739705 730.4931953358473 1210.4020512460431 851.8505423047975 1157.545139419438 2106.8660796972563 2383.1773486514967 1.1757997734991306 1.0087936425728532 0.8895241466962153 0.6746426399541379 0.5008230354527883 0.3065207026028472 0.5078942412451763 0.35744320194500456 0.48571506441785645 0.8840576136263677 1.0 11.218670601066323 -3.3432875271073 13.319577303773864 0.709600542751323 0.9204604594110443 0.0 0.28221626838478575 0.0 0.0 0.04206099231341185 0.0 0.0004536411815100708 3.3432875271073 0.21085991665972126 SATS(ph)PEGK ddPTM_A549_PD325901_60min_R1 1 SATSPEGK 8 0 P13639 P13639 EEF2 Elongation factor 2 1 S(0.023)AT(0.102)S(0.874)PEGK 105.35 0.0019912 35599000.0 8827.7 8232.7 7542.4 7075.1 8105.3 6693.4 5277.7 7277.2 7748.0 8640.8 10415.0 True False 9723.88160539073 8926.498521663169 8054.272620135686 7512.1128582820675 7536.0116897670205 6638.891169589694 5478.5457615682535 7132.050537147038 7422.378504395783 8095.218413351844 9134.021026124652 1.0645784126814455 0.9772802685840181 0.8817882723391236 0.8224321836786135 0.8250486470540096 0.7268311678505537 0.5997956153044537 0.7808226537631474 0.8126079941316844 0.8862710508546369 1.0 13.157034395404285 -5.595506619303821 2.1346536505909093 0.8538315625271458 1.0668932067720012 0.34915374920947395 0.10098033949498475 0.4721236756158379 3.655123191864129 0.018489316219232665 0.14721264050469318 2.5380103025588054e-06 5.595506619303821 0.2130616442448554 SATT(ph)T(ph)PSGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 3 S(0.389)AT(0.512)T(0.55)T(0.55)PS(0.101)GS(0.898)PR 52.928000000000004 0.055737 1232200.0 138.24 0.0 153.28 141.3 0.0 209.33 181.99 131.98 0.0 247.54 0.0 True False 152.27402303309074 0.0 163.68250254751788 150.0277800844167 0.0 207.62528588314035 188.9157290387492 129.34755536369292 0.0 231.91028215455924 0.0 0.0 SATT(ph)TGSPGTEK ddPTM_A549_MK2206_60min_R1 1 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SAT(0.373)T(0.557)T(0.07)GSPGTEK 174.73 7.3111e-16 4585300.0 674.78 659.42 946.52 1046.7 2147.7 2021.4 1820.8 1886.9 3950.7 3565.0 2931.4 True False 788.666367212922 692.9816613894533 1080.7507687145735 1303.1415469881485 1831.7761750409875 2235.303206303277 2151.615791183047 2154.373853388896 3055.8727579715155 2759.6640239999706 2203.4524774757915 0.3579230209295888 0.3144981198701921 0.4904806342602173 0.5914089640276645 0.8313209355617303 1.0144549197920405 0.9764747881687346 0.9777264885044771 1.3868566666217512 1.252427294080496 1.0 11.105550066573858 -6.8173258474586795 0.7788837598258537 1.1693490842724912 0.29240101952096753 0.8948251544121983 0.1095495347384584 0.21465278543316252 0.2347338152566418 0.026834764345886337 0.10316658230219589 1.5229096988349585e-07 6.8173258474586795 -0.8769480647515236 down SATT(ph)TGSPGTEK ddPTM_A549_PD325901_60min_R1 1 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SAT(0.461)T(0.501)T(0.038)GSPGTEK 227.93 2.8338999999999996e-40 14455000.0 2619.1 2819.7 2915.1 3470.1 3373.8 3086.8 3420.8 3391.3 3381.5 3532.4 3649.9 True False 2884.9891039204854 3057.326014738011 3112.936215920337 3684.4401958310973 3136.835926978146 3061.662124225277 3550.980415933585 3323.6578610766187 3239.3873144830104 3309.3636611568427 3200.985438622405 0.9012815457111502 0.9551202507355921 0.9724930886471131 1.1510331010492676 0.9799594490901942 0.9564748677966219 1.1093397592779446 1.0383233303638544 1.0119968917687836 1.0338577680569143 1.0 11.644300398698025 -5.729818316248616 2.6428085207316925 1.0186732363723938 0.9151086456424758 0.3419968447576611 0.05536319288984346 0.2557614138058235 3.4525973611593646 0.0074494492058672585 0.03763437438270924 1.8628662894388255e-06 5.729818316248616 -0.10356459072991797 SATT(ph)TPS(ph)GSPR ddPTM_A549_MK2206_60min_R1 1 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 2 S(0.01)AT(0.08)T(0.725)T(0.186)PS(0.534)GS(0.465)PR 77.67399999999999 0.0017097999999999998 16175000.0 715.27 807.94 589.53 565.47 1243.8 709.58 478.77 756.28 839.85 1193.6 1017.5 True False 835.9900893274641 849.0606950092431 673.1342186961735 704.0101753849128 1060.8386676518974 784.6672846189168 565.7563117007397 863.4850060103639 649.6253159648611 923.9649310087977 764.8266684286062 1.09304516152015 1.1101347927023806 0.8801134250184794 0.920483299610034 1.3870314823507266 1.0259413237133514 0.7397183375719998 1.1289943743521111 0.8493758687828774 1.208071016805877 1.0 9.578989018714354 -7.534627849784137 24.857961185501352 0.9302077757880082 1.074806455999801 0.01937532552942789 0.17194113475898085 282.67825661974615 598069.6391003913 0.022859560371163566 0.033920090607663676 2.9199280506306485e-08 7.534627849784137 0.14459868021179278 SATT(ph)TPSGSPR ddPTM_A549_MK2206_60min_R1 1 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 S(0.026)AT(0.079)T(0.483)T(0.365)PS(0.035)GS(0.013)PR 45.82899999999999 0.043366 4641700.0 252.64 387.59 416.79 425.91 551.92 350.99 425.06 546.38 496.22 607.2 547.65 True False 295.2794555450258 407.3166754692582 475.89708922426007 530.2579691198262 470.73329912400305 388.1315288316941 502.2878999342409 623.8310382185729 383.82696230051033 470.03309828128545 411.65339062892 0.7173011622566761 0.9894651295036433 1.15606260037647 1.2881175794755466 1.143518576161419 0.9428600314422542 1.2201719003622207 1.5154279119758736 0.9324032572988242 1.14181762857139 1.0 8.685286298829423 SATT(ph)TPSGSPR ddPTM_A549_PD325901_60min_R1 1 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 S(0.011)AT(0.07)T(0.472)T(0.323)PS(0.111)GS(0.013)PR 68.132 0.0045104 4930600.0 545.73 687.99 575.52 532.64 863.77 889.21 535.97 725.77 649.56 470.94 929.42 True False 601.1321078548076 745.9693318011149 614.5782480829041 565.5399630867915 803.1017750447304 881.9685685766357 556.3666316440379 711.293947994449 622.2612521057466 441.2047680288766 815.1072320788061 0.7374883747770368 0.9151793806302447 0.7539845358941504 0.6938227767216205 0.9852713157709844 1.0820276570572316 0.6825686360616751 0.8726384946682448 0.7634102945188753 0.5412843251355425 1.0 9.670846056494907 -10.941275529657199 1.1783206911809945 1.0007857124283106 0.8300987457585811 0.0 0.18059302374090455 0.6155453043327478 1.5073709999002491 0.08572288789672458 0.019688323303514613 1.1447864236056084e-11 10.941275529657199 -0.1706869666697295 SATTT(ph)GSPGTEK ddPTM_A549_MK2206_60min_R1 1 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SAT(0.229)T(0.229)T(0.541)GS(0.001)PGTEK 164.11 2.9317e-14 4998300.0 604.72 812.27 757.68 1088.3 2171.9 1595.9 1580.3 1585.1 2773.0 2753.7 2810.5 True False 706.7819520154688 853.6110735143178 865.1304171487741 1354.9335488556428 1852.4163870985326 1764.7770787273157 1867.420054265471 1809.7927791651607 2144.9199275710657 2131.637257472292 2112.575284146041 0.3345594153825239 0.40406184807722484 0.4095145974873424 0.6413658055283662 0.876852248059566 0.8353676633307225 0.8839543226126171 0.8566761112594985 1.0153105281822414 1.0090230977656998 1.0 11.044787039135663 -6.418777568418556 0.6004327689400932 1.00210206858808 0.2130195626406251 0.9452395160732496 0.057867369424816295 0.199900325894975 0.1001257516005336 0.011513734797612668 0.08450409686433791 3.812610429669207e-07 6.418777568418556 -0.7890825059474549 down SATTT(ph)GSPGTEK ddPTM_A549_PD325901_60min_R1 1 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SAT(0.001)T(0.023)T(0.968)GS(0.008)PGTEK 244.26 6.8069e-51 125590000.0 5045.2 4904.0 5743.1 5592.4 6176.0 5028.9 6028.0 6282.9 5961.8 5631.7 6757.4 True False 5557.384989920062 5317.277290589497 6132.861302065827 5937.829846738085 5742.219066043338 4987.94630572648 6257.398838648167 6157.582630660303 5711.246278717969 5276.113500888064 5926.2826386879215 0.9377522687899453 0.8972365333838924 1.0348580511549212 1.0019484740695257 0.9689411417128537 0.8416652748156492 1.0558724954828604 1.0390295242522538 0.9637147984528863 0.8902905619864588 1.0 12.532911718202206 SATTT(ph)PS(ph)GSPR ddPTM_A549_PD325901_60min_R1 2 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 2 SAT(0.002)T(0.025)T(0.972)PS(0.839)GS(0.161)PR;S(0.013)AT(0.015)T(0.144)T(0.662)PS(0.836)GS(0.33)PR 97.734 0.00042455 57769000.0 1122.17 1029.94 899.9 915.3900000000001 1224.78 1104.22 1085.05 1164.3899999999999 1030.19 1192.91 1423.23 True False 1236.0918723021082 1116.736658374744 960.972625538304 971.931561298473 1138.7556780616198 1095.2275984229743 1126.3421715121424 1141.1653280037153 986.8946968822278 1117.5894590167063 1248.181732598308 0.9903140224051888 0.8946907563292581 0.7698980047864279 0.7786779247884263 0.9123316327431754 0.8774584420035271 0.9023863609728247 0.9142621608699406 0.7906658710890075 0.8953739906850335 1.0 10.285612287476553 -11.014475684084589 1.2878781240197945 1.0002965224338896 0.8603806134918687 0.08072665943796042 0.07076660252450002 0.4002885642730123 1.1781817353719544 0.04896842700774948 0.010989288371024973 9.672178791449809e-12 11.014475684084589 -0.13991590894202088 SATTT(ph)PSGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 2 S(0.006)AT(0.008)T(0.099)T(0.88)PS(0.495)GS(0.511)PR 74.524 0.0021376999999999998 14916000.0 540.64 691.65 475.41 546.47 588.23 567.78 570.26 667.59 579.72 909.2 968.79 True False 631.8868146210526 726.8520307239932 542.8302866865944 680.3551745319705 501.70214622356934 627.8621027381388 673.8688604349974 762.2229269086295 448.4143456226106 703.8110885331758 728.2127057562157 0.8677228639740184 0.9981314868286877 0.7454282002988261 0.9342808346435713 0.6889500035605319 0.8621960284064704 0.9253736650134596 1.0467036909457599 0.61577385574034 0.9664910855988157 1.0 9.508216102723546 -5.752187931423739 24.942799041744816 0.8358371797826138 0.932927135096713 0.0 0.13265403304678683 478.88168679082503 1291081.0813373642 0.021314986956325072 0.08027476057739552 1.769343148146026e-06 5.752187931423739 0.09708995531409914 SATTT(ph)PSGSPR ddPTM_A549_MK2206_60min_R1 1 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 S(0.002)AT(0.008)T(0.033)T(0.591)PS(0.336)GS(0.029)PR 60.691 0.0086719 4449500.0 259.41 367.67 448.12 362.62 568.64 412.09 327.56 421.24 635.58 661.35 756.99 True False 303.19206603441717 386.38283255445737 511.6701543299398 451.4619162786304 484.99380927285284 455.69709027679676 387.0734119946829 480.95205999339623 491.6221448127003 511.95057567247665 569.008491138841 0.5328427795999915 0.6790458113922556 0.899231140304881 0.7934185927086127 0.852348983935482 0.8008616696821916 0.6802594654079336 0.8452458398833304 0.8639979059517092 0.8997239648354528 1.0 9.152306371361933 -5.3256271103913395 0.0575833141803061 1.401026521180703 1.3363691512009223e-13 0.47754967712919905 0.08955471722548104 77.33075565316696 0.6744774706121592 5.243000614598597 12.33645309535045 4.724685333919498e-06 5.3256271103913395 -1.4010265211805693 SATTT(ph)PSGSPR ddPTM_A549_PD325901_60min_R1 1 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 SAT(0.024)T(0.112)T(0.841)PS(0.016)GS(0.007)PR 84.31 0.00056148 4820700.0 689.49 688.49 706.38 500.13 847.41 687.66 404.68 782.19 690.88 713.74 832.8 True False 759.4865172242896 746.5114685558648 754.3191946080098 531.0218942223589 787.8908450057947 682.0599249529466 420.0803188493931 766.5886068338152 661.8447161999178 668.6743345923694 730.3708795541629 1.0398641820001089 1.0220991683178202 1.0327892523158446 0.7270578675679242 1.0787544616876614 0.933854215777734 0.5751602789884241 1.0495881315829028 0.9061762109189303 0.9155271017931949 1.0 9.51248543488833 SATTTGS(ph)PGTEK ddPTM_A549_MK2206_60min_R1 2 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SAT(0.001)T(0.064)T(0.064)GS(0.848)PGT(0.023)EK;SAT(0.001)T(0.003)T(0.05)GS(0.947)PGTEK 250.69 1.0097999999999998e-62 121563000.0 5783.0 5507.9 5964.7 4940.4 6871.0 5139.5 4871.4 4957.2 6919.0 7539.9 7261.700000000001 True False 6759.02901922453 5788.228583856978 6810.584150521715 6150.798221782983 5860.285001958659 5683.358478676011 5756.47032357705 5659.898280788297 5351.857547372596 5836.631353312029 5458.419477275686 1.2382758502463027 1.0604220888398816 1.247720916077505 1.1268460123648951 1.0736230563363638 1.0412095483567694 1.0546038734366605 1.0369115646665488 0.9804775117876657 1.069289631845061 1.0 12.414267554050793 -7.103553764859019 0.6838800153481835 0.991562414133907 1.1864300442594726 0.5705895284196456 0.05447013921696667 0.3025362403768074 0.26371179283847884 0.008789557450461677 0.028496443774897174 7.878548904256862e-08 7.103553764859019 0.19486763012556563 SATTTGS(ph)PGTEK ddPTM_A549_PD325901_60min_R1 1 SATTTGSPGTEK 12 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SATTT(0.001)GS(0.999)PGTEK 249.69 1.1023999999999998e-62 82426000.0 5443.0 5434.6 6275.2 6075.3 6263.1 5524.9 5318.2 6420.2 5970.0 5399.8 6848.3 True False 5995.5693530751805 5892.592814730362 6701.0728078430575 6450.557482992618 5823.201462522025 5479.90704617476 5520.587011230703 6292.144074450535 5719.1016612342355 5058.855706464367 6006.002514950496 0.9982628775380388 0.9811172739375603 1.1157292710354934 1.0740184452030297 0.9695636070791792 0.9124050535333362 0.9191782716521566 1.047642597349528 0.9522309800899866 0.8422999647222199 1.0 12.552189363670678 -6.776149401627219 24.72584138189721 0.9724183032149104 1.043159293909763 0.30205889468479763 0.06200116395516428 190.52521979694316 320250.67766856356 0.007248258722864139 0.01374169463695322 1.6743667780925455e-07 6.776149401627219 0.07074099069485251 SATTTPSGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 SATTTPS(0.025)GS(0.975)PR;SATTT(0.001)PS(0.017)GS(0.982)PR 125.97 2.1703e-06 46942000.0 1522.42 2617.8 1629.07 1298.38 2191.6000000000004 1318.18 1674.63 2017.2599999999998 2904.8 3078.7 3079.7 True False 1779.3672764046007 2751.034838472158 1860.0966221420026 1616.4831582864933 1869.218543194966 1457.6689326629325 1978.8885942381728 2303.212782599654 2246.8674380124185 2383.219531749989 2314.9254946040096 0.7686499114343974 1.1883902289230042 0.803523321367278 0.6982873367002286 0.807463802853281 0.6296828714620385 0.8548389997219676 0.9949403503345324 0.9706003252587474 1.029501613466684 1.0 11.176750046054707 -8.202131143363735 4.927208917599046 0.9864715377298774 0.8208361447873376 0.29341672689829945 0.13235137075075665 0.23229365432338195 11.852081360258406 0.021593246488319284 0.02786327954693114 6.2786873344493775e-09 8.202131143363735 -0.16563539294253982 SATTTPSGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SATTTPSGSPR 11 0 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 SATTTPS(0.012)GS(0.988)PR;SATTTPS(0.012)GS(0.988)PR 140.24 2.9362e-09 65022000.0 3088.6 3080.0 2454.3 2540.3 3626.3 3421.8 2764.6000000000004 3160.7 2804.5 2943.8999999999996 3826.3 True False 3402.152398292854 3339.56240926094 2620.8635569048365 2697.208561560112 3371.601198055858 3393.933995294175 2869.8083658471687 3097.657358978816 2686.63661791146 2758.0216515908837 3355.689356914137 1.0138460496300061 0.9951941476287224 0.7810209105037541 0.8037718259000116 1.0047417503378064 1.011396954340019 0.8552068027197308 0.9231061130841368 0.8006213722899749 0.8218942095781883 1.0 11.712393453365175 -5.555827008730458 24.997023520610455 0.9019895993958945 1.0091834183331003 0.21262274090064504 0.08299026967714711 221.050299407433 167704.8907824567 0.01285436385198728 0.04978525698987931 2.780820723485577e-06 5.555827008730458 0.10719381893720581 SAVATAEALGLDRPAS(ph)DKQSPLNINGASYLR ddPTM_A549_PD325901_60min_R1 1 SAVATAEALGLDRPASDKQSPLNINGASYLR 31 2 H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3;A0A5F9ZGX7 H7BYY2 BCOR BCL-6 corepressor 1 S(0.001)AVAT(0.001)AEALGLDRPAS(0.556)DKQS(0.436)PLNINGAS(0.004)Y(0.002)LR 44.099 0.0073402 4956100.0 2068.7 2281.1 1953.7 1995.3 2674.0 2496.3 2554.4 2513.6 2479.9 2459.5 1855.7 True False 2278.712901103549 2473.336302521145 2086.28983055249 2118.5451493449154 2486.1874647992063 2475.970960445629 2651.609089821315 2463.4642761189466 2375.678427084552 2304.2067502591044 1627.4606642515134 1.4001646559928091 1.5197518175707545 1.2819294969024624 1.3017489122044354 1.52764826788771 1.521370694132478 1.6292922760384003 1.5136859097309858 1.4597455282749656 1.4158294580464308 1.0 10.668406958513776 -10.518653199813633 0.80194401647731 0.9955294948989493 1.4632326031554388 0.1158999446788066 0.15414091064379556 0.27277724372078105 0.311088078264985 0.0761034907961464 0.02088605282453246 3.0293314956155634e-11 10.518653199813633 0.46770310825648953 SAVAVYSYSCEGPEEES(ph)EDDSHLEGR ddPTM_A549_MK2206_60min_R1 1 SAVAVYSYSCEGPEEESEDDSHLEGR 26 0 A0A1B0GTY1;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1;A0A1B0GTI3;A0A1B0GUC3 A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 SAVAVYSYSCEGPEEES(0.97)EDDS(0.03)HLEGR 130.87 2.668e-24 5519900.0 811.49 1030.2 1016.9 943.56 1080.7 754.4 813.28 1249.6 1754.8 1473.9 1185.5 True False 948.449672974323 1082.632779660026 1161.1117110107014 1174.7322423580185 921.730461594634 834.2301072698087 961.042448733166 1426.7346267395008 1357.3406018397793 1140.9449663319929 891.1076318644848 1.0643491751830922 1.21492930926291 1.3029982793226458 1.318283224552908 1.0343649056916686 0.9361721047370339 1.078480774227413 1.6010800218984897 1.5232061238211871 1.2803671807240251 1.0 9.799455887042754 SAVCIADPLPT(ph)PSQEK ddPTM_A549_MK2206_60min_R1 1 SAVCIADPLPTPSQEK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.917)PS(0.083)QEK 110.98 4.5037e-07 2131800.0 701.38 1242.8 808.58 880.57 1467.4 1253.8 1111.9 1121.8 1538.4 1433.9 1401.5 True False 819.7557969053607 1306.0532115720068 923.2488025263385 1096.3096895302897 1251.5474038530256 1386.4762837949183 1313.9178373332754 1280.8185853684156 1189.954856319988 1109.9809941132005 1053.4688705677565 0.7781490462680322 1.239764408860152 0.87638925868665 1.0406664308357252 1.1880250464150086 1.3161056036213874 1.2472298651075968 1.2158105674998552 1.1295586320255233 1.053643847601294 1.0 10.04093196859324 -5.245168170715812 23.980406245773935 1.1029414929972456 0.7781486039180785 0.37712888011467205 0.1257331302052139 1645.80951133432 2425515.7790492605 0.018573997312104903 0.6345136369553234 5.686326980547799e-06 5.245168170715812 -0.32479288907916715 SAVCIADPLPT(ph)PSQEKSQTELPDEK ddPTM_A549_PD325901_60min_R1 1 SAVCIADPLPTPSQEKSQTELPDEK 25 1 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.499)PS(0.499)QEKS(0.001)QTELPDEK 149.57 8.8269e-33 6057900.0 1914.3 2089.6 2425.6 1909.9 2196.2 2234.4 1814.8 2394.6 1629.6 2156.9 2313.8 True False 2108.6383267668234 2265.6979254518374 2590.215802317714 2027.8701853023886 2041.946488478688 2216.203787212958 1883.8632070966648 2346.837824472641 1561.1135790866508 2020.7129659011432 2029.2172683866727 1.0391387652852444 1.1165378694284316 1.27646055583642 0.9993361563075229 1.0062729705144564 1.0921471159049168 0.9283693946653768 1.1565236808468973 0.7693181028011913 0.9958090724842438 1.0 10.986707627451452 -7.902207029796903 0.9089257528598945 0.9006699009800129 1.1076805673748127 0.16161739848794843 0.11376616368413382 0.47040905350980594 0.780697974265384 0.02434131512521255 0.03937354228799108 1.2525439402397423e-08 7.902207029796903 0.2070106663947998 SAVCIADPLPTPS(ph)QEK ddPTM_A549_MK2206_60min_R1 1 SAVCIADPLPTPSQEK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.127)PS(0.873)QEK 56.482 0.0065046999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SAVCIADPLPTPS(ph)QEKSQTELPDEK ddPTM_A549_MK2206_60min_R1 2 SAVCIADPLPTPSQEKSQTELPDEK 25 1 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.01)PS(0.33)QEKS(0.33)QT(0.33)ELPDEK;SAVCIADPLPT(0.039)PS(0.739)QEKS(0.176)QT(0.046)ELPDEK 78.921 1.2164e-06 6283300.0 2324.5 2034.58 2023.89 2053.9 2488.71 1656.12 1919.8500000000001 2121.2 3043.6000000000004 2837.7 3071.7 True False 2716.818771431335 2138.1314316061894 2310.908035005849 2557.1055922030746 2122.6240557742026 1831.3695191565157 2268.661894059078 2421.886595902554 2354.229459630471 2196.6615991317567 2308.912115392776 1.1766661681573656 0.926034134149998 1.0008644415695889 1.1074936872458994 0.9193178214204644 0.7931741996359944 0.9825674519764687 1.0489297447731394 1.0196271412565159 0.9513838073295726 1.0 11.17299754521456 -5.2476336199890135 23.94882060650994 0.9928246937907022 1.1766663909969926 0.3297957428160001 0.07901574750128465 1242.8611921512859 2155921.2548302673 0.010812527690421814 0.2867780385684302 5.654137686820329e-06 5.2476336199890135 0.1838416972062904 SAVCIADPLPTPS(ph)QEKSQTELPDEK ddPTM_A549_PD325901_60min_R1 1 SAVCIADPLPTPSQEKSQTELPDEK 25 1 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.014)PS(0.674)QEKS(0.134)QT(0.179)ELPDEK 126.99 2.577e-19 5489400.0 2281.4 2023.1 1747.2 1702.2 1762.0 1906.1 1622.8 2130.5 1598.2 1820.0 2079.2 True False 2513.006048522086 2193.5937370700667 1865.7754987671146 1807.341028023313 1638.2431985700084 1890.5773535654416 1684.556542030233 2088.005506155084 1531.033211890211 1705.0848893968562 1823.4715811347446 1.3781437969865398 1.202976651659685 1.0231996583166074 0.9911539322694606 0.8984199235781516 1.0368011068145835 0.9238183690156196 1.1450715918784542 0.8396254856560202 0.935076206855817 1.0 10.832472000061113 -5.457787568602873 1.2334768576243977 0.9463425306902564 1.4948741414890643 0.7251301484970691 0.07752688470236278 0.42044420854879383 0.679352437534034 0.012534557427738017 0.26604246896173694 3.4850774290518398e-06 5.457787568602873 0.5485316107988079 SAVKKAESER ddPTM_A549_MK2206_60min_R1 1 SAVKKAESER 10 2 Q5TZA2;Q5TZA2-2;B1AKD8 Q5TZA2 CROCC Rootletin 0 42.395 0.026151 8205700.0 2217.5 1952.2 1859.2 1534.8 1937.1 1983.5 1863.2 1572.8 2777.3 2748.1 3405.9 False True 2591.759787330171 2051.558641479619 2122.8625165808808 1910.8260688997912 1652.155156060853 2193.39265345926 2201.719322348558 1795.7492164979906 2148.2459844367563 2127.3023013616603 2560.121031942005 1.0123583045463151 0.8013522079162753 0.8292039673493727 0.7463811456797865 0.6453425972629092 0.8567534995778854 0.8600059508430434 0.7014313753501752 0.8391189157206302 0.8309381762892569 1.0 11.32199630115884 -10.170810932507953 0.760366958718104 0.9944890526582056 0.8029367289236344 0.055285972446516785 0.10248315258414763 0.49058660677767413 0.5505302713860043 0.049209999656103294 0.01850196119243431 6.748217433490612e-11 10.170810932507953 -0.1915523237345712 SAVKKAESER ddPTM_A549_PD325901_60min_R1 2 SAVKKAESER 10 2 Q5TZA2;Q5TZA2-2;B1AKD8 Q5TZA2 CROCC Rootletin 0 ; 35.224000000000004 0.051651999999999997 27714000.0 1815.25 2053.25 1748.51 1505.32 2026.35 1985.76 1758.69 1610.52 1642.6899999999998 2464.63 2020.65 False True 1999.5328436835791 2226.284583381503 1867.1744032447837 1598.3001975702348 1884.0261665279984 1969.5886289366294 1825.6179103420945 1578.3969151715023 1573.653451908352 2309.0128411836135 1772.1228599557148 1.1283263078800005 1.2562811719708518 1.0536371069054682 0.9019127475225821 1.0631464720087636 1.1114289383896607 1.0301869873670704 0.8906814255592562 0.8880047131425626 1.3029643109740798 1.0 10.79126291299317 -5.530089832790417 0.48533427321575656 0.9494606057881674 1.3272455697897731 0.0 0.13421733078137055 2.4071658681329176 0.4406173070278383 0.018441794500568588 0.4910836850536458 2.9505988391214606e-06 5.530089832790417 0.37778496400160577 SAVLLVDETATT(ph)PIFANR ddPTM_A549_PD325901_60min_R1 1 SAVLLVDETATTPIFANR 18 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 SAVLLVDET(0.006)AT(0.204)T(0.79)PIFANR 109.48 3.17e-09 56325000.0 2779.8 3161.3 2410.6 2845.8 2415.9 2425.8 2546.6 3146.4 3386.9 3057.9 3342.0 True False 3062.0032496194 3427.7138455833137 2574.1978121153884 3021.5786027192694 2246.2155184025437 2406.0450890714264 2643.5122565529896 3083.642583696949 3244.560371262015 2864.823672135523 2930.9551866834913 1.0447117252189022 1.1694869512699466 0.8782794850671907 1.030919413728165 0.7663766162676265 0.8209081803785528 0.9019285823828114 1.0520947565855587 1.1069976047410612 0.977436872850042 1.0 11.517155194537462 -8.276584892333416 22.23358526824358 1.0520560477324936 0.9424539859722177 0.1256178445435474 0.10981822925070452 258.0338954739829 378792.14576301025 0.019065501838863963 0.02311376469509335 5.2895059216782625e-09 8.276584892333416 -0.10960206176027587 SAVQKPPS(ph)TGSAPAIESVD ddPTM_A549_MK2206_60min_R1 1 SAVQKPPSTGSAPAIESVD 19 1 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 TXLNG Gamma-taxilin 1 SAVQKPPS(0.465)T(0.465)GS(0.07)APAIESVD 134.85 7.9059e-17 5688700.0 1275.2 1510.4 1079.1 894.26 2101.3 1075.5 1040.3 1305.2 1907.8 1705.4 1421.2 True False 1490.422584353298 1587.2729085599926 1232.1326063050922 1113.3537401448575 1792.2015535752776 1189.3086961408799 1229.3090441386878 1490.2160970073596 1475.6863461305743 1320.14895554826 1068.276816875415 1.3951651489663606 1.4858254747141106 1.1533832681204634 1.0421959201560576 1.6776565074371432 1.11329636415725 1.1507401683903178 1.3949718588540259 1.3813707484983007 1.2357742250829158 1.0 10.061069818004604 -10.819532504691558 0.9848213837469305 0.99369292994798 1.3101532812750203 0.08821533372027224 0.18976989964799393 0.58031064660519 0.9666005075899137 0.13252576639439065 0.030310979850574307 1.5151913952301697e-11 10.819532504691558 0.3164603513270403 SAVQKPPS(ph)TGSAPAIESVD ddPTM_A549_PD325901_60min_R1 2 SAVQKPPSTGSAPAIESVD 19 1 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 TXLNG Gamma-taxilin 1 SAVQKPPS(0.848)T(0.147)GS(0.005)APAIESVD;SAVQKPPS(0.792)T(0.196)GS(0.012)APAIESVD 205.06 3.8686e-55 14147200.0 3322.4 3597.9 3459.7 3552.9 4006.1 3903.7 3548.8999999999996 3479.9 3491.6 4214.3 3864.6 True False 3659.687602178391 3901.1076598311483 3694.496046866179 3772.3545637786538 3724.7253562947276 3871.909561467609 3683.9553315325934 3410.490664571262 3344.8601943660747 3948.2083787830607 3389.278699717841 1.079783613688382 1.1510141258539517 1.0900537766852125 1.1130257786391848 1.0989728748493928 1.14239928448196 1.0869437594020475 1.006258548420697 0.9868944075459288 1.1649111001440369 1.0 11.726762558889998 -8.22149089395387 3.1935949265236783 0.9938701908425854 1.112830599184858 0.11917849223024768 0.05523859452112833 0.05187192803301996 1.075217529524567 0.002952587712929047 0.0037964672747656967 6.004945996136837e-09 8.22149089395387 0.1189604083422725 SAVQKPPST(ph)GSAPAIESVD ddPTM_A549_MK2206_60min_R1 1 SAVQKPPSTGSAPAIESVD 19 1 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 TXLNG Gamma-taxilin 1 SAVQKPPS(0.077)T(0.461)GS(0.461)APAIESVD 123.36 8.058099999999999e-14 3828500.0 1038.4 1014.3 846.44 1217.4 1433.8 1132.9 1166.5 1084.3 1502.3 1884.4 1849.3 True False 1213.6565335574535 1065.923537574418 966.477919822891 1515.6630546511635 1222.8899193433747 1252.7827260418426 1378.437950579428 1238.0028455294832 1162.0314486801342 1458.7127312273612 1390.0677719164837 0.8730916276723599 0.7668140784998069 0.6952739566722058 1.0903519132463029 0.8797340273973684 0.9012385952338378 0.9916336299768883 0.890606106076865 0.8359530895950805 1.0493824550843567 1.0 10.440939507052828 -14.999874491075708 0.016400196196866976 2.0171607641622264 0.022913594501399008 0.22779220764466068 0.0996398876463444 4968.39302542832 6.336246148834835 489.29315184708133 302.31695969607733 1.0002890367411836e-15 14.999874491075708 -1.9942471696608275 SAVRPAS(ph)LNLNR ddPTM_A549_MK2206_60min_R1 2 SAVRPASLNLNR 12 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.001)AVRPAS(0.999)LNLNR;S(0.058)AVRPAS(0.942)LNLNR 110.57 2.2341999999999997e-05 103119000.0 8107.5 9734.1 10041.2 7674.5 12046.8 8189.8 7468.5 7246.4 12608.6 11772.7 12826.6 True False 9475.847790655866 10229.52411229729 11465.193148392817 9554.752844521401 10274.73167829946 9056.439200050743 8825.429776170136 8273.599391169277 9752.772231796802 9113.238893504758 9641.401223849001 0.9828289032528154 1.0609997317603073 1.1891625379133146 0.9910128852315297 1.0656886317399437 0.9393281111098982 0.91536796065903 0.8581324642629408 1.0115513300776564 0.945219339172632 1.0 13.235027119062533 -7.242236947040402 23.59824420885534 0.9816647915216794 1.0616807500618737 0.34118108129923475 0.0684140157559115 483.2989489858612 593934.2716164673 0.010612324385080092 0.018357692934780033 5.724836040214955e-08 7.242236947040402 0.08001595854019428 SAVRPAS(ph)LNLNR ddPTM_A549_PD325901_60min_R1 2 SAVRPASLNLNR 12 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.013)AVRPAS(0.987)LNLNR;SAVRPAS(1)LNLNR 105.14 4.6698999999999995e-05 148368000.0 6575.200000000001 6954.099999999999 7729.799999999999 6971.2 9202.5 7745.4 6883.5 8709.5 7488.9 8342.0 8704.9 True False 7242.709463593591 7540.146412416074 8254.39071106344 7401.795191256091 8556.148146901527 7682.324030379189 7145.4553592957345 8535.78219002943 7174.167576351262 7815.284696345369 7634.2524849075835 0.9487123301085407 0.9876731778680949 1.0812310343916225 0.9695507459163756 1.1207578166711765 1.0062968241575243 0.9359731517161414 1.1180901086130057 0.9397341246617296 1.0237131548629907 1.0 12.89827118574274 SAVS(ph)S(ph)AQAS(ph)TNRK ddPTM_A549_MK2206_60min_R1 1 SAVSSAQASTNRK 13 1 F6VGH2 F6VGH2 KIF6 3 S(0.585)AVS(0.711)S(0.711)AQAS(0.585)T(0.409)NRK 41.644 0.03417 58040000.0 1656.5 2460.4 2772.2 2418.6 3666.1 2621.6 3331.5 3018.6 4133.6 3106.1 3725.0 True False 1936.0767024633285 2585.6238507819166 3165.339645258988 3011.1571085750807 3126.8215464533037 2899.0159719227595 3936.79042636551 3446.495794074793 3197.3462000027976 2404.429852719862 2799.9796952300317 0.6914609794355208 0.9234437861055615 1.1304866426893643 1.075421051697198 1.1167300790716699 1.0353703553141629 1.4060067767891737 1.2309002811506629 1.141917637992057 0.8587311746638673 1.0 11.45120064979763 -5.419619736290451 2.2141351206854387 1.1071908122612624 0.6503336220447369 0.4834241183022546 0.130568476070479 0.2749277796596932 1.9387926142386942 0.016886819197236162 0.21386429941817028 3.8052243196261245e-06 5.419619736290451 -0.4568571902165255 SAVS(ph)S(ph)AQAST(ph)NRK ddPTM_A549_MK2206_60min_R1 1 SAVSSAQASTNRK 13 1 F6VGH2 F6VGH2 KIF6 3 S(0.502)AVS(0.749)S(0.749)AQAS(0.041)T(0.958)NRK 53.136 0.010112000000000001 21267000.0 3023.0 4577.5 4733.0 4733.4 6439.6 4773.9 5160.9 4285.3 7559.1 6692.9 6770.4 True False 3533.208494745936 4810.475197916685 5404.210569587619 5893.083212490403 5492.343370486537 5279.070929341647 6098.568726228349 4892.754398180847 5846.975919402256 5180.969241579073 5089.122826465885 0.6942666968797754 0.9452464328233349 1.0619139592157467 1.1579762197610042 1.079231835774077 1.03732433060722 1.1983536130259738 0.9614140913904007 1.148916251145516 1.018047592531181 1.0 12.313201295980111 -5.324961298114405 2.043271623168542 1.0770188354557606 0.6153024193556202 0.7281409329113093 0.06815247930957007 0.24530085097526091 1.2212678620605737 0.009925679722094355 0.19898989210344384 4.73193425423651e-06 5.324961298114405 -0.46171641610014036 SAVS(ph)S(ph)AQAST(ph)NRK ddPTM_A549_PD325901_60min_R1 2 SAVSSAQASTNRK 13 1 F6VGH2 F6VGH2 KIF6 3 S(0.576)AVS(0.712)S(0.712)AQAS(0.186)T(0.814)NRK;S(0.505)AVS(0.748)S(0.748)AQAS(0.03)T(0.969)NRK 52.101000000000006 0.011085 158905000.0 9325.3 8383.3 11352.3 12744.0 11014.0 17274.4 10676.3 11010.5 12622.6 8607.3 9645.0 True False 10271.99759107697 9089.79011219391 12122.735344925537 13531.16793627604 10240.41463623727 17133.723013709066 11082.592438795526 10790.886939929846 12092.116018273911 8063.833609068987 8458.726144692479 1.2143669644066026 1.074605083165791 1.4331632372957341 1.5996697026024802 1.210633192406014 2.025567765243211 1.3101963876380394 1.2757106395625193 1.429543386489849 0.9533153658283084 1.0 13.04622469941274 -10.682706923205693 0.7343596842004521 0.9722193088996316 1.4060148451542696 0.30895953373985474 0.2408123788432832 0.8638909388734725 0.7431002693988277 0.22627428497653462 0.04653530830312075 2.076314212743626e-11 10.682706923205693 0.43379553625463796 SAYLPGQT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 SAYLPGQTSPK 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 SAYLPGQT(0.799)S(0.201)PK 111.63 6.5349e-05 8152500.0 3030.5 3292.4 2809.5 3171.2 4412.0 3739.3 3354.9 3472.1 4916.9 4949.5 4050.8 True False 3541.9743113885393 3459.9690970225893 3207.9293461348884 3948.1441423605784 3763.000644541058 4134.990244053544 3964.4419034710045 3964.2808078602943 3803.2300006758655 3831.404512422962 3044.87456360747 1.1632578739769566 1.1363256596433742 1.0535505746201368 1.296652476114794 1.2358475089636451 1.3580166137138143 1.3020049991071094 1.3019520919651748 1.24905966443817 1.2583127588295908 1.0 11.572167080876145 -10.598094443506866 0.9139231449776608 1.001939046966655 1.2336295668682586 0.0 0.11157546382409295 0.39831653203232475 0.6011968777308369 0.05928162329459541 0.016798098964595515 2.5229320653895504e-11 10.598094443506866 0.23169051990160372 SAYLPGQTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SAYLPGQTSPK 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 SAYLPGQT(0.172)S(0.828)PK 103.44 0.00021212 9491700.0 2214.5 3146.5 2675.7 2149.7 3309.3 2479.4 2248.5 2730.3 4199.7 3308.2 3618.4 True False 2588.253460673131 3306.643410211875 3055.1544941993648 2676.3765965037005 2822.5063538032014 2741.768462307481 2657.023344944573 3117.3283861930704 3248.4746555428087 2560.8753223553144 2719.851417240363 0.9516157552824136 1.2157441355994687 1.1232799243494005 0.9840157368666951 1.037742847242367 1.0080581773431416 0.9769001821579147 1.1461392215888024 1.1943573957575968 0.9415497133860532 1.0 11.409312125304794 -8.279917517466323 24.475672950092967 1.0984212652502832 1.0484965707198206 0.0 0.0952322985132492 1639.507297910599 2171644.6254751068 0.016348850323118974 0.01978252734052199 5.2490714275028835e-09 8.279917517466323 -0.049924694530462554 SAYLPGQTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SAYLPGQTSPK 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 SAYLPGQT(0.083)S(0.917)PK 134.56 5.5488e-08 12985000.0 6549.5 6308.1 6565.6 6009.8 7946.9 6545.0 6352.2 7148.5 7347.8 7328.8 6846.9 True False 7214.400418512936 6839.705725278875 7011.181098160118 6381.011696753904 7388.737159316677 6491.699689987832 6593.936447057214 7005.917559610232 7038.9975186628035 6866.058317259167 6004.774706075164 1.2014439794408884 1.1390445204145616 1.1676010244092505 1.0626563042070658 1.230476998885791 1.0810896341239973 1.0981155446824642 1.166724465536099 1.1722334081145946 1.1434331266937663 1.0 12.551894402945127 -10.792392204865614 0.902095813443472 0.9945244865692588 1.1457701008728343 0.006862179995240969 0.06356620876071478 0.3626122962995675 0.4926061873260848 0.03775493221708179 0.00820623214664651 1.612901311812103e-11 10.792392204865614 0.15124561430357542 SAYQEYDS(ph)DSDVPEELKR ddPTM_A549_MK2206_60min_R1 2 SAYQEYDSDSDVPEELKR 18 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 SAYQEYDS(0.865)DS(0.135)DVPEELKR;SAYQEYDS(0.893)DS(0.107)DVPEELKR 287.95 1.5888999999999996e-117 134031000.0 17450.5 17386.6 14800.3 13909.2 23903.5 21307.1 18716.3 18072.8 26008.1 25254.1 24686.3 True False 20395.717776236834 18271.50367582704 16899.205090443204 17316.954624407706 20387.326814774984 23561.803179491704 22116.80944228868 20634.674745628723 20117.306876401388 19549.181270265806 18556.01040278046 1.0991434760772019 0.9846676779772235 0.9107132796126802 0.9332261756984631 1.0986912796578363 1.2697666506999354 1.1918946455739572 1.1120210809181694 1.084139663630873 1.0535228664959428 1.0 14.179598939646752 -6.769823813338767 24.947145284805966 1.0789484136137046 0.9770451964721814 0.31344917520551396 0.08466212412415429 233.6101536423817 695089.0470640612 0.014597294280159583 0.027913129309899917 1.698932743831328e-07 6.769823813338767 -0.10190321714152328 SAYQEYDS(ph)DSDVPEELKR ddPTM_A549_PD325901_60min_R1 2 SAYQEYDSDSDVPEELKR 18 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 SAYQEYDS(0.97)DS(0.03)DVPEELKR;SAYQEYDS(0.991)DS(0.009)DVPEELKR 280.8 2.556099999999999e-116 239690000.0 37100.1 32670.6 39471.9 32634.3 43914.6 36098.6 36508.2 35529.9 38330.2 39437.4 43993.0 True False 40866.474840349896 35423.86611948067 42150.70049781689 34650.04659312723 40830.18999314556 35804.62497005268 37897.539529053596 34821.228271832675 36719.31499086106 36947.3158335712 38582.13989460409 1.059207056736251 0.9181415602205848 1.092492552589388 0.8980851421870774 1.0582665996412468 0.928010345404925 0.9822560291518138 0.9025219536022313 0.951717947505458 0.9576274393929733 1.0 15.23564554185088 -7.286038615123505 24.983420805214813 0.9677930452852713 0.9992943533821255 0.1280126120953471 0.06032746888335286 1735.7774963646646 1762881.9978154018 0.008302049902918645 0.013275331691775673 5.1756081118812755e-08 7.286038615123505 0.03150130809685414 SCDS(ph)DEDYEASGR ddPTM_A549_MK2206_60min_R1 1 SCDSDEDYEASGR 13 0 Q8IVE3;Q8IVE3-2 Q8IVE3 PLEKHH2 Pleckstrin homology domain-containing family H member 2 1 S(0.066)CDS(0.923)DEDY(0.011)EASGR 62.042 0.0072539 906280.0 332.99 105.88 282.13 200.76 332.27 311.41 362.37 404.94 503.4 389.27 257.4 True False 389.1905711761326 111.268839749955 322.1402763570158 249.94620901245887 283.3935231554074 344.36319950277203 428.2079384067447 462.3414850767397 389.3807037646139 301.33363664024347 193.48047612139882 2.011523741196171 0.5750907894197018 1.6649756234571684 1.291842019530853 1.4647137987069707 1.77983436058273 2.2131842291832418 2.389602787552811 2.0125064377053627 1.5574369191192834 1.0 7.596044182894085 -7.034042550645189 5.430374616093998 1.6450718527718882 1.3502194579061086 0.10186716513044725 0.48569643597389034 0.5178243893971126 41.77999917406841 0.08620931687404579 0.15468531084889117 9.246075797029907e-08 7.034042550645189 -0.2948523948657795 SCDS(ph)DEDYEASGR ddPTM_A549_PD325901_60min_R1 1 SCDSDEDYEASGR 13 0 Q8IVE3;Q8IVE3-2 Q8IVE3 PLEKHH2 Pleckstrin homology domain-containing family H member 2 1 S(0.017)CDS(0.982)DEDYEASGR 53.251999999999995 0.022362 664300.0 219.44 270.04 0.0 296.97 338.44 221.6 327.58 156.26 393.01 291.26 231.64 True False 241.71738725681018 292.79721850546247 0.0 315.31316243219544 314.6691419546162 219.79536307124587 340.0462361586539 153.1432717164014 376.49315642909005 272.86979389325757 203.1497484869431 1.189848321531867 1.4412876249476685 0.0 1.5521218449968266 1.5489516688958178 1.0819376578522941 1.6738698358787751 0.7538442595032021 1.8532789690029476 1.3431953321408887 1.0 7.666399768191304 SCEGQNPELLPKT(ph)PIS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 SCEGQNPELLPKTPISPLK 19 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 2 S(0.002)CEGQNPELLPKT(0.998)PIS(0.999)PLK 45.972 0.014691999999999998 1553900.0 1967.4 1871.2 2268.2 2014.6 2438.0 2304.4 2094.6 2017.7 2263.3 2033.3 2504.3 True False 2167.128999676668 2028.8925909769703 2422.1336917946255 2139.037266511436 2266.763290643405 2285.6337304213857 2174.3111492090998 1977.4553906449707 2168.181371837764 1904.9170909948514 2196.28697606567 0.9867239679027583 0.9237830088176535 1.1028311501138741 0.9739334111716181 1.0320888460140958 1.0406808196421433 0.9899941004540597 0.9003629362622255 0.9872031275811446 0.86733523977237 1.0 11.100850859905423 -7.976250707340981 24.74756899720572 0.9847881423746561 1.0101431282152358 0.08525358743303124 0.06066520490976586 519.5971867506188 541436.7978255596 0.007569891835434829 0.010459118732077893 1.0562076109572144e-08 7.976250707340981 0.025354985840579713 SCFES(ph)S(ph)PDPELK ddPTM_A549_PD325901_60min_R1 1 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.324)CFES(0.677)S(0.998)PDPELK 91.31299999999999 0.00031109 5186400.0 2669.0 2950.5 2459.2 3019.6 3347.2 3510.7 3131.7 3359.2 3358.3 3313.0 3655.1 True False 2939.9549151860488 3199.1489897806505 2626.096100370927 3206.1138339908325 3112.1042192131254 3482.1100231688733 3250.8785572319966 3292.198120758581 3217.1623298028376 3103.8166145998825 3205.545871587922 0.9171464184131896 0.9980044329223394 0.8192352271877006 1.0001771811808855 0.9708500030515835 1.0862767724000626 1.0141419550554172 1.0270319791517237 1.0036238627304874 0.9682646073201734 1.0 11.646354338596659 -6.482976933634554 24.88130514248428 1.0084927811915954 0.9183812200288223 0.4445922141118769 0.048362637153060634 329.70227610501274 205590.03773573923 0.006028577132008485 0.014007269647673215 3.288690973961762e-07 6.482976933634554 -0.09011156116277308 SCFES(ph)SPDPELK ddPTM_A549_PD325901_60min_R1 2 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SCFES(0.766)S(0.234)PDPELK;SCFES(0.5)S(0.5)PDPELK 281.26 2.0671999999999993e-92 839710000.0 46490.0 48669.8 51623.0 44635.2 48757.7 46182.1 48819.0 50206.8 35914.6 50427.4 54796.0 True False 51209.6305758709 52771.37485267797 55126.447214317064 47392.2149301058 45333.127356933524 45806.00828922645 50676.83375978186 49205.38598752733 34405.23425838576 47243.4053580061 48056.439380463366 1.0656143325651675 1.0981124597036083 1.1471188445294578 0.9861782425223207 0.9433309654514903 0.9531710813316769 1.0545274350971532 1.0239082758081126 0.7159339040081422 0.9830816841002209 1.0 15.552442139160682 -7.113953827356486 0.6591953314337283 0.8794725417199393 1.1063281677240644 0.2000196168097219 0.09558074588076827 0.7442317797956249 0.5994463475975012 0.02447326030359514 0.08049775478761266 7.6921221584439e-08 7.113953827356486 0.22685562600412512 SCFES(ph)SPDPELKS(ph)RTPSR ddPTM_A549_PD325901_60min_R1 1 SCFESSPDPELKSRTPSR 18 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.001)CFES(0.499)S(0.499)PDPELKS(0.517)RT(0.437)PS(0.046)R 60.765 0.0010197000000000001 15844000.0 1509.1 1272.9 1545.1 1409.1 1476.7 1673.4 1439.6 1390.7 1406.0 1850.8 1831.6 True False 1662.3027210592968 1380.1717502429383 1649.959777441087 1496.1369067017088 1372.9816863384394 1659.7723852140023 1494.3847657793474 1362.9613975169552 1346.910709496705 1733.9401721404952 1606.3248114690255 1.0348484373711928 0.8592108771455355 1.0271644723785074 0.9314037211026163 0.8547347812444062 1.0332732043752082 0.9303129448723972 0.8484967596749575 0.8385045788248271 1.079445551584777 1.0 10.64954793126246 -7.993945222291397 24.929582772669804 0.9146995779453496 0.9524169295759481 0.0 0.08644309737465262 442.46486841539485 1821764.5714628976 0.012741170505750457 0.017580720154706585 1.014039278785111e-08 7.993945222291397 0.03771735163059853 SCFESS(ph)PDPELK ddPTM_A549_MK2206_60min_R1 4 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SCFES(0.051)S(0.949)PDPELK;SCFES(0.011)S(0.989)PDPELK;SCFES(0.046)S(0.954)PDPELK;SCFES(0.21)S(0.79)PDPELK 289.86 1.0413999999999998e-109 512922000.0 45121.5 48531.6 45992.8 39809.6 61497.1 49727.3 43667.0 44934.8 69016.0 65897.4 66933.7 True False 52736.90608523942 51001.651144776275 52515.27062855047 49562.95378712085 52450.95805471574 54989.40987968975 51600.72866519665 51304.44550705357 53383.98619590502 51011.13157226811 50312.215013857356 1.0481928905478368 1.0137031559975849 1.0437876888164501 0.9851077670396714 1.0425094192388333 1.0929634058954505 1.0256103542844297 1.0197214631262592 1.0610541829891929 1.0138915879219044 1.0 15.618621085753325 -4.8219393384592015 10.701019671578063 1.0309200842572657 2.437873962808206 0.032208209381539454 0.02836794257274469 1401773.1816672604 698210.4346361567 0.00421012286398393 47601239.83635879 1.5068175212879189e-05 4.8219393384592015 1.4069538785509401 SCFESS(ph)PDPELKS(ph)RTPSR ddPTM_A549_PD325901_60min_R1 1 SCFESSPDPELKSRTPSR 18 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.001)CFES(0.469)S(0.529)PDPELKS(0.528)RT(0.415)PS(0.057)R 75.112 0.00015907 13794000.0 1494.0 1903.4 1796.0 2523.4 1767.0 2132.7 2241.5 2912.2 1944.6 1941.5 2260.0 True False 1645.66978017533 2063.8061979828803 1917.887360225352 2679.2646869427963 1642.8920158190704 2115.3319982944327 2326.8015090958656 2854.113886423296 1862.875224528658 1818.9133586615367 1982.034327320374 0.830293278724494 1.0412565360424704 0.9676357940875091 1.3517751181257531 0.8288918073584479 1.067252957800318 1.1739461204194188 1.4399921570893965 0.9398804041134777 0.9177002303086396 1.0 10.952766233778824 SCGTDSQSENEAS(ph)PVKRPR ddPTM_A549_MK2206_60min_R1 4 SCGTDSQSENEASPVKRPR 19 2 H0Y398;C9JQ48;Q9H8U3 H0Y398 ZFAND3 AN1-type zinc finger protein 3 1 SCGTDSQSENEAS(1)PVKRPR;SCGTDSQSENEAS(1)PVKRPR;SCGTDSQSENEAS(1)PVKRPR;SCGTDSQS(0.001)ENEAS(0.999)PVKRPR 147.67 1.6275999999999998e-21 37254900.0 2296.13 2941.4 2720.56 2606.18 3054.86 2651.8599999999997 2224.56 2354.5699999999997 3691.72 4198.71 3613.8099999999995 True False 2683.660609011243 3091.104696264806 3106.3763167541288 3244.694216995867 2605.4941407485735 2932.4780650377984 2628.733756828954 2688.3375080682044 2855.551314465438 3250.2184948692607 2716.4012409179195 0.9879470560484604 1.1379411294998039 1.1435631341798496 1.1944826736640086 0.9591713114768463 1.0795452530594718 0.9677266072594853 0.9896687822008828 1.0512258908777765 1.1965163488774415 1.0 11.407480881154866 -6.766942789959033 24.999997236953668 1.0182181275461966 1.1195218745298283 0.1792380507981527 0.0784346891824592 96.50686379334856 438397.4586708802 0.007936483290306998 0.015302617617682321 1.710240591934031e-07 6.766942789959033 0.10130374698363176 SCGTDSQSENEAS(ph)PVKRPR ddPTM_A549_PD325901_60min_R1 2 SCGTDSQSENEASPVKRPR 19 2 H0Y398;C9JQ48;Q9H8U3 H0Y398 ZFAND3 AN1-type zinc finger protein 3 1 SCGTDSQSENEAS(1)PVKRPR;SCGTDSQSENEAS(1)PVKRPR 182.77 4.8657e-44 67769000.0 3231.0 3787.2 3437.8 3584.3 3957.7 3002.3 3864.6 3951.1 3382.3999999999996 4090.7000000000003 4065.2999999999997 True False 3559.0087414635136 4106.360635179556 3671.10978117078 3805.694070464081 3679.7248053237904 2977.8502642093927 4011.6694677902647 3872.2922109220144 3240.249490612843 3832.4125038767706 3565.293872059964 0.9982371353324603 1.1517593731500662 1.0296794353868164 1.0674278774852346 1.032095792764962 0.835232766517741 1.125200225212401 1.0861074429987092 0.908830970710609 1.0749219114615285 1.0 11.79980528146874 -7.011362960365652 24.618819198187257 0.9715443005151511 1.063892141122569 0.011620220156284944 0.08736524742776043 548.1499753436705 1187618.5985212608 0.012197389606603864 0.02196673406040232 9.741751333357771e-08 7.011362960365652 0.09234784060741796 SCLLEEEEES(ph)GEEAAEAME ddPTM_A549_MK2206_60min_R1 4 SCLLEEEEESGEEAAEAME 19 0 Q969H6-2;Q969H6 Q969H6-2 POP5 Ribonuclease P/MRP protein subunit POP5 1 SCLLEEEEES(1)GEEAAEAME;SCLLEEEEES(1)GEEAAEAME;SCLLEEEEES(1)GEEAAEAME;SCLLEEEEES(1)GEEAAEAME 191.09 2.3584e-44 14778100.0 2038.09 2135.2200000000003 1558.3500000000001 1799.6399999999999 2880.41 2297.4500000000003 1633.1 1821.55 2655.94 2043.18 2810.35 True False 2382.0697654835394 2243.8935777379947 1779.3474627333337 2240.5518807889102 2456.7055046560554 2540.5646340761164 1929.8131308111992 2079.7602907629166 2054.3738306646587 1581.624218949862 2112.4625332858323 1.127626988857571 1.062216982493757 0.8423095958845933 1.0606350860594158 1.1629581429000637 1.202655476272231 0.9135372109106565 0.9845193739497718 0.9725019015931046 0.7487111340572383 1.0 11.044710038590841 -7.796402657265544 24.999912888542774 0.9814482796064566 1.068333389835556 0.24807677556707253 0.11318032858391877 244.8408888433643 175068.56364817565 0.014482894455956711 0.020011416118516916 1.5980756814892276e-08 7.796402657265544 0.0868851102290994 SCLLEEEEES(ph)GEEAAEAME ddPTM_A549_PD325901_60min_R1 4 SCLLEEEEESGEEAAEAME 19 0 Q969H6-2;Q969H6 Q969H6-2 POP5 Ribonuclease P/MRP protein subunit POP5 1 SCLLEEEEES(1)GEEAAEAME;SCLLEEEEES(1)GEEAAEAME;SCLLEEEEES(1)GEEAAEAME;SCLLEEEEES(1)GEEAAEAME 164.65 1.6764e-27 27221300.0 3126.99 3692.29 2715.29 3237.54 3799.44 2909.3999999999996 2999.0299999999997 3364.69 2406.1400000000003 3106.3900000000003 3362.21 True False 3444.439722831627 4003.452236392882 2899.5659077651985 3437.515492813181 3532.5804417564314 2885.706811008496 3113.1597277821847 3297.578618401758 2305.018303377243 2910.252005260166 2948.679484805236 1.1681295781996925 1.357710207916109 0.9833438739974544 1.1657813304317928 1.1980211684450888 0.9786437711791862 1.055780983936887 1.1183238583218098 0.7817120562798273 0.9869679021599025 1.0 11.52585329769844 -7.784693166112528 0.8628061951736549 0.904902509618306 1.1824632744212684 0.3618189887864489 0.11581944916711522 0.3759083715646951 0.5639069250040911 0.0245685106338299 0.04312797069558629 1.641749277695982e-08 7.784693166112528 0.27756076480296243 SCPETLTHAVGMS(ph)ESPIGPK ddPTM_A549_PD325901_60min_R1 1 SCPETLTHAVGMSESPIGPK 20 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 SCPETLTHAVGMS(0.6)ES(0.4)PIGPK 119.4 6.3219e-15 8751000.0 3482.4 4122.3 3564.5 3726.2 4809.7 4146.9 3881.2 4486.7 4714.5 4474.6 4898.0 True False 3835.930684392617 4469.700688213109 3806.4084050797705 3956.3589111857964 4471.883264564224 4113.129021300315 4028.901189874133 4397.20924875194 4516.365960115379 4192.072992359987 4295.577050980177 0.8929954320147333 1.0405355637127263 0.8861227164371812 0.9210308333971156 1.0410436622348136 0.9575265377585928 0.9379185013000306 1.0236597310595494 1.051399126709838 0.9759045042396407 1.0 12.068636235040254 -8.2730576217157 22.829279147249533 1.0249040942248655 0.9568376569980316 0.22247343690520638 0.05093460256525045 211.4230999285254 415435.04724125966 0.007850004993080006 0.009539925781871956 5.33264137892557e-09 8.2730576217157 -0.06806643722683392 SCPETLTHAVGMSES(ph)PIGPK ddPTM_A549_PD325901_60min_R1 1 SCPETLTHAVGMSESPIGPK 20 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 SCPETLTHAVGMS(0.058)ES(0.942)PIGPK 123.99 2.575e-15 10594000.0 3332.0 4062.5 3957.5 4424.2 4333.4 4634.5 4094.2 4689.8 4056.3 3987.2 5056.6 True False 3670.2621871112456 4404.8611323449895 4226.0797483807555 4697.472785912782 4029.0369334184275 4596.758168563576 4250.007021432203 4596.258259923075 3885.827817163219 3735.447511540189 4434.670256428409 0.8276291076638466 0.993278164472272 0.9529636938067075 1.0592608952386977 0.908531345161011 1.0365501610633188 0.9583591959901593 1.0364374337100783 0.8762382753329634 0.8423281316407595 1.0 12.114611120394443 -5.252796394385903 23.943536432844063 0.961883349355622 0.8276289819667297 0.2664972326478353 0.06579672008136063 624.1283334884299 1728941.8682695401 0.008375766831234444 0.13254007260620257 5.587320776988098e-06 5.252796394385903 -0.1342543673888923 SCS(ph)EEKIPEDGSLNTTK ddPTM_A549_MK2206_60min_R1 1 SCSEEKIPEDGSLNTTK 17 1 P37173;P37173-2 P37173 TGFBR2 TGF-beta receptor type-2 1 S(0.12)CS(0.88)EEKIPEDGSLNTTK 91.12799999999999 1.5536e-06 7429200.0 3798.7 3924.4 3276.0 3562.4 4627.9 3588.1 3263.5 3778.3 5832.0 6029.1 5936.3 True False 4439.827690701749 4124.135197532333 3740.5860608428147 4435.1881599222115 3947.1420405420595 3967.790360411984 3856.435706571766 4313.885595558468 4511.061311790282 4667.122122608195 4462.152876454776 0.9949967680688779 0.9242478489013579 0.8382917762814857 0.993957016427015 0.8845824313572381 0.8892098657911587 0.864254500763708 0.9667722543351971 1.0109607260642233 1.0459350568724284 1.0 12.123524226824365 -8.501557318618582 4.9361078384491535 1.0046850397222042 0.9114298159048771 0.4885061876430835 0.047245737030221516 0.12050852460527404 7.938545122446991 0.007284518122228349 0.008608664894934167 3.150958486118499e-09 8.501557318618582 -0.0932552238173271 SCS(ph)FGR ddPTM_A549_MK2206_60min_R1 1 SCSFGR 6 0 O14974-5;O14974-4;O14974-2;O14974;F8VZN8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.009)CS(0.991)FGR 77.741 0.024516 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SCS(ph)FGR ddPTM_A549_PD325901_60min_R1 1 SCSFGR 6 0 O14974-5;O14974-4;O14974-2;O14974;F8VZN8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.011)CS(0.989)FGR 71.342 0.04963 15321000.0 3807.9 3978.3 4487.6 3572.7 3668.9 3486.1 3663.1 4440.5 3024.3 4019.6 4092.7 True False 4194.475204772181 4313.565302845064 4792.155522131009 3793.377564809592 3411.2091210178796 3457.7103574127696 3802.5012750252317 4351.93074399514 2897.199188286549 3765.8017700107725 3589.3238457628736 1.1685975924751613 1.2017765707981862 1.3351137228222119 1.0568501834370838 0.9503765242706492 0.9633319549849281 1.0593920856469972 1.2124653363703888 0.8071712982116773 1.0491674565548683 1.0 11.809496380454277 -6.491012122509552 3.955165117010558 0.9492544484243733 1.230974215902104 0.3999356710742259 0.10903824008785688 0.13976552959473795 4.734691836836289 0.0176434269363699 0.04126889161279005 3.228404005659492e-07 6.491012122509552 0.28171976747773064 SCS(ph)FSSESR ddPTM_A549_MK2206_60min_R1 1 SCSFSSESR 9 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.002)CS(0.537)FS(0.219)S(0.219)ES(0.024)R 127.76 5.1733999999999996e-05 16485000.0 3348.4 4294.8 3391.2 3455.5 3750.7 3783.8 3352.6 2807.7 4332.6 4150.3 5243.3 True False 3913.528059479752 4513.386975426017 3872.123153092231 4302.097655123291 3198.9769985222456 4184.199204516837 3961.724023242685 3205.700073220631 3351.2730177404983 3212.744347491465 3941.2439022817807 0.9929677422942582 1.1451681467399148 0.9824621995229648 1.0915583409168343 0.8116668437267229 1.061644320488361 1.0051963596947266 0.8133726693150589 0.8503084561197243 0.8151599919079985 1.0 11.944435317498476 -6.735781425686648 24.999763693579574 0.9281039400739649 1.0545785754007633 0.3523472865671641 0.09197101528690167 221.65266547007295 215965.6265827474 0.012984319982785656 0.02702151663632549 1.8374628799371655e-07 6.735781425686648 0.12647463532679837 SCS(ph)SPAVSAVSQLPLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SCSSPAVSAVSQLPLSPK 18 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 2 S(0.295)CS(0.353)S(0.353)PAVSAVSQLPLS(1)PK 111.95 2.0997e-15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SCS(ph)SPAVSAVSQLPLS(ph)PKETVESHDK ddPTM_A549_PD325901_60min_R1 2 SCSSPAVSAVSQLPLSPKETVESHDK 26 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 2 S(0.256)CS(0.372)S(0.372)PAVSAVS(0.001)QLPLS(0.665)PKET(0.313)VES(0.021)HDK;S(0.27)CS(0.365)S(0.365)PAVSAVS(0.003)QLPLS(0.803)PKET(0.158)VES(0.037)HDK 132.96 1.9800999999999998e-23 25302000.0 3877.2 4901.5 3983.3999999999996 5185.3 5389.299999999999 5366.299999999999 4254.5 5016.1 5015.9 5044.3 4795.700000000001 True False 4270.810489756218 5314.566606815746 4253.737478130105 5505.5842043292705 5010.774160075677 5322.598631991094 4416.407325651729 4916.049950445676 4805.099166262112 4725.802037134375 4205.859302447045 1.0154430242760102 1.263610174435373 1.0113836845790833 1.3090271947818184 1.1913794066197885 1.2655198971811328 1.0500606435127735 1.1688574431354442 1.142477391829636 1.1236234256302435 1.0 12.038184873424823 -10.403399188931717 0.5325550778891796 0.9823077147432282 1.1685450677087388 0.07008299027835962 0.10201172755789899 1.0763779574190322 0.492566888645357 0.09712400171634207 0.02133404845137202 3.950033792872325e-11 10.403399188931717 0.18623735296551058 SCS(ph)VTDAVAEQGHLPPPSAPAGR ddPTM_A549_PD325901_60min_R1 1 SCSVTDAVAEQGHLPPPSAPAGR 23 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.201)CS(0.729)VT(0.07)DAVAEQGHLPPPSAPAGR 111.95 2.0332000000000003e-11 22824000.0 2803.8 3162.3 2667.3 3380.2 3111.2 2450.8 2858.1 2869.8 3083.9 3073.4 3256.7 True False 3088.4397119515324 3428.798119092817 2848.319017777888 3588.987277008812 2892.6800450573264 2430.84149736015 2966.86655951233 2812.5595876854513 2954.2944075511305 2879.3449994902753 2856.14654592224 1.0813309689451827 1.200497966040349 0.997259409481097 1.256583728917152 1.0127911850977136 0.8510913072127535 1.0387655226403443 0.9847392430549412 1.034363734511108 1.0081222910642158 1.0 11.479854289117085 -6.95763461475323 24.99925762683991 1.002594425940331 1.1296344631750397 0.43672189391945315 0.07782326281657989 108.08520335221857 63779.19294603407 0.010368947907052114 0.019595458935100667 1.1024664582589375e-07 6.95763461475323 0.1270400372347087 SCSFS(ph)SESR ddPTM_A549_MK2206_60min_R1 1 SCSFSSESR 9 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.001)CS(0.103)FS(0.446)S(0.446)ES(0.004)R 114.86 0.00021243 16516000.0 3187.7 3825.9 3275.6 3030.5 4379.0 3492.7 2452.4 2479.8 4138.6 4044.4 4161.2 True False 3725.705828217539 4020.621968259847 3740.1293348280583 3772.9726360443133 3734.854900826224 3862.295195733378 2897.969335620223 2831.3192440689963 3201.2137079861573 3130.767231042211 3127.859196722473 1.1911360435026996 1.2854229411838154 1.1957473465388573 1.2062475957990124 1.1940610705046415 1.2348046867904041 0.9265024904755494 0.9051939572714124 1.023451986374754 1.0009297203412433 1.0 11.610959854608396 -7.75299366388563 24.99483539267121 0.9959640682183416 1.2183517590507846 0.887653119619836 0.04329406303940832 51.35212070872943 151974.48547890026 0.0071887172698125775 0.010566426593449101 1.766063586381348e-08 7.75299366388563 0.22238769083244303 SCSQGSST(ph)PR ddPTM_A549_MK2206_60min_R1 2 SCSQGSSTPR 10 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 SCSQGSS(0.001)T(0.999)PR;SCSQGSS(0.005)T(0.995)PR 121.9 4.275e-05 20710000.0 1676.74 1299.93 1166.76 704.9399999999999 1549.95 1661.03 1859.4099999999999 1715.69 1788.3899999999999 2197.8 2568.7 True False 1959.732719642838 1366.090884550047 1332.2241124386333 877.6503316459589 1321.9544082063496 1836.799092097522 2197.2407284071105 1958.8943115802622 1383.322520471986 1701.3154535616093 1930.820897486546 1.014973849824149 0.7075181785780138 0.6899780886838657 0.45454776918379314 0.684659260694355 0.9513047504761226 1.1379826742435704 1.0145396261922899 0.7164426914338516 0.881135819369007 1.0 10.914998631088551 -7.254735863441072 23.743102027564547 0.9033327484021635 0.6948375079178594 0.341403572203249 0.15811632178463217 311.2966363120006 1102574.1470296052 0.02678375552920727 0.045673576416329464 5.5624245935440215e-08 7.254735863441072 -0.20849524048430412 SCSQGSST(ph)PR ddPTM_A549_PD325901_60min_R1 2 SCSQGSSTPR 10 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 SCSQGSS(0.005)T(0.995)PR;SCSQGSS(0.002)T(0.998)PR 117.67 7.5999e-05 26878000.0 2404.4 2865.8 2042.75 1799.44 2414.7 1772.88 1159.07 1614.6100000000001 1607.17 2555.3 2950.9 True False 2648.492917974272 3107.3110235259755 2181.383299053641 1910.5873219752482 2245.099802262769 1758.4422530764916 1203.1790431174402 1582.4053369129588 1539.626233984226 2393.9579219097736 2587.958007296326 1.023390994176597 1.2006806195330135 0.8428974863207156 0.7382605577790129 0.8675178638652853 0.6794709373640725 0.46491443822707823 0.61144938691108 0.5949193262191661 0.9250373905451322 1.0 11.337598492735609 -5.889038970318873 4.78527522043346 0.7584200984069545 1.1092052999613624 0.465103431212222 0.15257145879981793 0.17301051449090643 6.466370892004513 0.02640201829831192 0.08726938542907879 1.2911034145101907e-06 5.889038970318873 0.35078520155440795 SCSS(ph)PAVSAVSQLPLS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SCSSPAVSAVSQLPLSPK 18 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 2 S(0.022)CS(0.199)S(0.779)PAVSAVSQLPLS(1)PK 130.02 1.9681e-12 4400100.0 1638.1 2279.5 1563.5 1847.3 1746.7 1679.0 1983.5 2024.2 1750.2 1885.2 2061.2 True False 1804.3987060945171 2471.601464905945 1669.6085120892767 1961.4035254773016 1624.0178177878727 1665.3267806706754 2058.9831779128476 1983.8257430458198 1676.6451804844485 1766.168150269755 1807.6854670233427 0.998181784946118 1.3672740695182173 0.9236167146038781 1.0850358434905611 0.8983962350829154 0.9212480882600197 1.139016281025542 1.0974396703606417 0.9275093544040746 0.9770328867986349 1.0 10.81992795874194 -5.786916521740677 24.999537213027647 0.9838427061521265 1.182728256190125 0.2924011841042692 0.11023325769822347 152.68522313952963 149822.9728416317 0.014087226205661642 0.04382192147725794 1.6333658764436481e-06 5.786916521740677 0.19888555003799835 SCSS(ph)PAVSAVSQLPLS(ph)PKETVESHDK ddPTM_A549_MK2206_60min_R1 1 SCSSPAVSAVSQLPLSPKETVESHDK 26 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 2 S(0.291)CS(0.34)S(0.368)PAVS(0.282)AVS(0.168)QLPLS(0.448)PKET(0.083)VES(0.02)HDK 53.408 0.018059 5089900.0 1770.2 2133.1 2060.7 1874.5 2601.1 2453.5 1677.4 1944.1 3474.0 2754.7 3232.5 True False 2068.966482765218 2241.665678793247 2352.938246513671 2333.752584149504 2218.4816356563333 2713.1277414985093 1982.1618673827127 2219.682128556551 2687.144546838038 2132.41135677776 2429.7810375385457 0.8515032633809484 0.9225792958957874 0.9683746025515455 0.9604785567483389 0.913037677627007 1.1166140897399561 0.8157779803034074 0.9135317521471679 1.1059204534579012 0.8776146178743613 1.0 11.246610594258362 -8.750958076360734 24.98721969313228 1.0500179930898679 0.9360851201507926 0.0 0.09166556326484383 185.33052656888663 441824.1107014838 0.01316297328314448 0.014848944368983031 1.774360756540855e-09 8.750958076360734 -0.11393287293907528 SCSSPAVSAVSQLPLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SCSSPAVSAVSQLPLSPK 18 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SCSSPAVSAVS(0.002)QLPLS(0.998)PK 123.36 1.7615000000000003e-10 1611600.0 783.6 1063.2 959.7 796.47 1525.3 1060.0 1353.4 858.08 1416.0 1250.9 1220.3 True False 915.8525228193563 1117.3123387056305 1095.799890900748 991.6051857548966 1300.9303905526926 1172.168496428947 1599.2952613066418 979.7154677597883 1095.2782608873524 968.3208212122198 917.2658314333443 0.9984592158940669 1.2180900022839487 1.1946372069571387 1.081044503974805 1.41826975994497 1.2778939934972668 1.7435460980897326 1.0680823750175656 1.1940685277416703 1.0556599712202248 1.0 9.841196089475606 -9.889055217485165 0.839330706694726 1.0219644447973348 1.2564520974106206 0.16093540010207164 0.19180962005298544 0.6720809147471523 0.9738428336110624 0.07629894929382174 0.039219158522598885 1.2910551146114366e-10 9.889055217485165 0.23448765261328575 SCSSPAVSAVSQLPLS(ph)PKETVESHDK ddPTM_A549_PD325901_60min_R1 1 SCSSPAVSAVSQLPLSPKETVESHDK 26 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SCSSPAVSAVSQLPLS(0.717)PKET(0.126)VES(0.157)HDK 95.741 3.1141e-09 5651400.0 1533.4 1286.5 1298.6 1321.0 2232.6 1806.8 1493.3 1914.8 1743.8 1753.2 1740.9 True False 1689.0696391705821 1394.917869972143 1386.7308051161713 1402.595169791327 2075.7898780518717 1792.0860198426312 1550.1283486651143 1876.6078118684582 1670.5141502278493 1642.502652797016 1526.780336474354 1.1062951223690678 0.9136336358596888 0.9082713288791854 0.9186620604704696 1.359586463397408 1.1737680771949959 1.0152923191588095 1.2291275745677515 1.0941417768618935 1.075795000471311 1.0 10.576276795863423 SCT(ph)PS(ph)PDQISHR ddPTM_A549_MK2206_60min_R1 1 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.124)CT(0.891)PS(0.985)PDQISHR 67.13600000000001 0.0070547 7201200.0 253.02 253.17 213.15 128.4 238.75 237.14 285.06 267.64 379.43 283.91 314.62 True False 295.7235902549179 266.0552716234991 243.37787511252935 159.85800576409503 203.6301912702126 262.2339973992079 336.85171212359353 305.5787896131243 293.48971082520364 219.7745338159415 236.49117092973788 1.250463554695571 1.1250114352156715 1.0291203437139627 0.675957606094264 0.8610477527328564 1.1088532242800653 1.424373310848349 1.292136143652959 1.2410176230739716 0.9293139061044993 1.0 7.8856425133239565 -7.5059106148176635 23.91572093879316 1.1589827761577922 0.981239591763334 0.18969271113929476 0.18488389595324597 623.8501807508666 879285.1949321578 0.029892701317797733 0.04706615700141073 3.119531570618833e-08 7.5059106148176635 -0.17774318439445824 SCT(ph)PS(ph)PDQISHR ddPTM_A549_PD325901_60min_R1 1 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.207)CT(0.888)PS(0.904)PDQISHR 60.968 0.012047 10262000.0 588.49 559.22 716.42 632.44 574.2 605.11 385.42 547.57 575.53 639.69 865.03 True False 648.2330715765592 606.3474319827609 765.0405693834339 671.5043824245469 533.8701728824623 600.1821847835809 400.0873690099166 536.6482867896451 551.3424755594873 599.2998642298214 758.6367938769661 0.8544709099380804 0.7992591934330789 1.008441161248905 0.8851460776017276 0.7037230163253116 0.7911324491874263 0.5273767002062937 0.7073849978289841 0.7267541991232536 0.789969414964883 1.0 9.567265533798869 -4.328728804716298 18.91864148177974 0.8284535690822763 0.7999447905812624 0.0 0.13505763553470193 0.0 0.0 0.020806096083105352 0.0 4.691062241868552e-05 4.328728804716298 -0.028508778501013854 SCT(ph)PSPDQIS(ph)HRASLEDAPVDDLTR ddPTM_A549_PD325901_60min_R1 1 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.104)CT(0.727)PS(0.168)PDQIS(0.599)HRAS(0.401)LEDAPVDDLTR 80.79 1.5487999999999998e-05 2001200.0 179.62 0.0 160.57 0.0 119.0 0.0 194.33 192.14 0.0 161.09 148.63 True False 197.8548901707448 0.0 171.46724578584903 0.0 110.64185052771334 0.0 201.7253344914563 188.3076169690859 0.0 150.91874990820867 130.3494522431979 1.5178804879179657 0.0 1.3154427796592203 0.0 0.8488094780888275 0.0 1.5475733194113444 1.4446368107305374 0.0 1.1578011822146659 1.0 7.026240710142 -8.779482817004176 24.999969710680663 0.5277779402111502 0.7911620381642525 0.0 0.6453882653986573 761.6471304641242 1055291.1649890596 0.11123831291520346 0.11853743424080285 1.6615644167774516e-09 8.779482817004176 0.26338409795310225 SCT(ph)PSPDQISHR ddPTM_A549_MK2206_60min_R1 2 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.123)CT(0.488)PS(0.389)PDQISHR;S(0.198)CT(0.686)PS(0.116)PDQISHR 65.113 0.005405600000000001 74861000.0 3026.3 3365.5 3277.8999999999996 2425.05 3536.3999999999996 3451.7 2549.3 3294.5 4291.1 4173.4 4426.799999999999 True False 3537.065454068684 3536.789574787243 3742.7555094128998 3019.187358864632 3016.200244640751 3816.9566029469765 3012.474811326307 3761.505463983103 3319.1727014786175 3230.62604144782 3327.5033865353844 1.0629787691220045 1.0628958603314207 1.1247938994015205 0.907343136323064 0.9064454319853408 1.1470932286326578 0.9053258438492269 1.1304287410206377 0.9974964157540825 0.9708858763361219 1.0 11.700224419089357 -6.236198688333997 24.82214778820346 1.0006095970640596 1.0814901398198913 0.19580803317029383 0.07886247423884982 887.1453646947807 872433.0159670212 0.00991216199485609 0.02621286774156039 5.804987804297501e-07 6.236198688333997 0.08088054275583167 SCT(ph)PSPDQISHRAS(ph)LEDAPVDDLTR ddPTM_A549_PD325901_60min_R1 1 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.102)CT(0.706)PS(0.192)PDQIS(0.261)HRAS(0.739)LEDAPVDDLTR 99.37200000000001 9.896e-09 2517900.0 198.01 137.78 183.9 155.98 190.7 98.71700000000001 0.0 202.74 137.4 152.6 0.0 True False 218.11182943274224 149.39120413895205 196.3805598805359 165.61453034371763 177.3058898792851 97.91308148151704 0.0 198.69619165354686 131.62555582137085 142.96480995712108 0.0 0.0 SCTKPS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 SCTKPSPSK 9 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.033)CT(0.048)KPS(0.901)PS(0.018)K;S(0.006)CT(0.006)KPS(0.983)PS(0.006)K 50.292 0.023625 23031000.0 1455.29 1281.9 1023.38 800.49 1552.88 1067.52 1203.9 1136.66 1935.0700000000002 1794.3 1703.9899999999998 True False 1700.9073735755242 1347.143234562403 1168.5106724497314 996.6100859353613 1324.4534090876975 1180.484257837575 1422.633046465987 1297.785035875258 1496.7797346718144 1388.9663838045294 1280.8422552684633 1.327960072037923 1.0517635790209334 0.9122986594510911 0.7780896373741767 1.0340488093985418 0.9216468718001082 1.1107012129044762 1.0132278432703983 1.168590221407156 1.0844164284019528 1.0 10.322877093241548 -7.778689508454384 24.969338037108198 1.0777190692928182 0.9933465112015026 0.06275362448206967 0.13303117081245042 507.9955375447749 735314.8898293474 0.02186309659190074 0.03024669220717936 1.6646023045175503e-08 7.778689508454384 -0.08437255809131561 SCTKPS(ph)PSK ddPTM_A549_PD325901_60min_R1 4 SCTKPSPSK 9 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.092)CT(0.084)KPS(0.816)PS(0.008)K;S(0.004)CT(0.005)KPS(0.981)PS(0.01)K;S(0.119)CT(0.105)KPS(0.776)PS(0.001)K;S(0.009)CT(0.009)KPS(0.973)PS(0.009)K 60.434 0.0067182000000000006 1206059000.0 8181.99 8612.58 9583.8 8077.65 7586.9 6645.71 6288.5599999999995 7033.35 6281.599999999999 8389.59 9457.03 True False 9012.619601537317 9338.392342452144 10234.214300071124 8576.58809482582 7054.022317384101 6591.589541138125 6527.87459203207 6893.064316693665 6017.606196852426 7859.869855623617 8293.875263052481 1.0866596513317115 1.1259383637046934 1.2339484228394966 1.0340869403995943 0.8505098152136829 0.7947538794684204 0.7870717107493064 0.8311029643043774 0.725548191405727 0.9476715776806688 1.0 13.017830634446492 -6.616976155706639 3.4617557662759957 0.8510736269802764 1.1461662887665016 0.745128723479333 0.07832850869095087 0.12184257092685741 2.8721864984829963 0.015416337020039488 0.0341355090346401 2.415593455374403e-07 6.616976155706639 0.2950926617862252 SCTKPSPS(ph)KK ddPTM_A549_MK2206_60min_R1 1 SCTKPSPSKK 10 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.024)CT(0.019)KPS(0.268)PS(0.688)KK 43.512 0.013674 25645000.0 4914.6 5428.8 3944.0 2608.5 5536.9 5217.3 4776.8 4870.6 5284.8 6133.3 7035.5 True False 5744.064329566117 5705.102731720395 4503.318505483537 3247.582617100014 4722.429344687076 5769.391223036552 5644.682728099287 5561.022465586923 4087.801238091445 4747.783270238155 5288.391180078093 1.0861647964327203 1.078797414459826 0.8515479192326004 0.6140965194356248 0.8929803382315867 1.0909539454589583 1.0673723890478033 1.0515527834884566 0.7729763360718488 0.8977745988465332 1.0 12.36861318100197 -10.258566436347689 0.0028780442132386726 1.2431972588595845e-07 1.837306303607898 0.0 0.1492634272290549 457610.53250120213 375.23214366693145 121076.57452292755 118468.83310717638 5.5135785177318307e-11 10.258566436347689 1.8373061792881722 SCTPS(ph)PDQIS(ph)HRASLEDAPVDDLTR ddPTM_A549_MK2206_60min_R1 1 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.289)CT(0.331)PS(0.38)PDQIS(0.569)HRAS(0.432)LEDAPVDDLTR 66.20100000000001 0.00064007 2468900.0 0.0 0.0 0.0 0.0 167.65 0.0 132.73 135.01 107.1 136.67 196.42 True False 0.0 0.0 0.0 0.0 142.98890708461207 0.0 156.8453229150515 154.1480809507843 82.84202100355613 105.79615207856264 147.64349308378067 0.0 0.0 0.0 0.0 0.9684741541807917 0.0 1.0623246554187744 1.0440560415575686 0.5610949678395052 0.7165649489106056 1.0 7.2059739654635235 -6.959815433898393 1.0053388588445935 0.8142884301677018 5.275852122697205e-22 0.5691213426931797 0.3053512437272496 0.31117550322032805 0.6110342225584752 0.050505873284656125 0.141755520415652 1.0969442755496183e-07 6.959815433898393 -0.8142884301677018 SCTPS(ph)PDQISHR ddPTM_A549_MK2206_60min_R1 3 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPS(1)PDQISHR;SCT(0.005)PS(0.984)PDQIS(0.012)HR;S(0.001)CT(0.016)PS(0.982)PDQISHR 164.53 2.4381e-14 72063900.0 4980.9 6256.0 5970.299999999999 5926.0 7301.0 5644.9 6074.9 5564.8 7655.7 8764.6 7939.8 True False 5821.554148686748 6574.403678463532 6816.978314728282 7377.870266028247 6227.0325715762165 6242.239571218637 7178.630695220723 6353.62744148526 5921.696173640752 6784.6707727209405 5968.128532667766 0.975440478002658 1.1015854706340849 1.1422304793561606 1.2362116910927727 1.0433811097551413 1.0459291446305938 1.202827763498562 1.0645929300462258 0.9922199465422272 1.1368171338106516 1.0 12.543062891207914 -8.612222049366585 4.316034016767114 0.9965359473802513 1.1096926315106561 0.03047196142700681 0.0810285424730205 0.17398871640034003 6.014830800894363 0.011592164390307486 0.013182201818328939 2.4421815763654577e-09 8.612222049366585 0.1131566841304048 SCTPS(ph)PDQISHR ddPTM_A549_PD325901_60min_R1 3 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.001)CT(0.018)PS(0.981)PDQISHR;SCT(0.001)PS(0.999)PDQISHR;S(0.001)CT(0.002)PS(0.997)PDQISHR 194.83 2.2008e-24 99766000.0 10160.7 10952.2 11840.8 11623.400000000001 13672.800000000001 12698.199999999999 12471.1 12564.900000000001 12367.699999999999 12506.2 14240.800000000001 True False 11192.206784087999 11875.18033074925 12644.387892514678 12341.351019343305 12712.469696599324 12594.790069274793 12945.69453494778 12314.283212526643 11847.92857883528 11716.556397678554 12489.27187986903 0.8961456593901428 0.9508304763458941 1.0124199404206802 0.9881561661921899 1.017871163257328 1.0084487062513103 1.0365451772904744 0.9859888815756791 0.9486484634810853 0.938129661230613 1.0 13.608401750336624 -5.4219550536935515 3.154803884689154 0.9876507743895065 0.8952542305613881 0.5113618071307393 0.027970504991995323 0.19271913917364397 3.181822619328285 0.0041228652188351755 0.034827610961784154 3.7848175278693886e-06 5.4219550536935515 -0.09239654382811846 SCTPSPDQIS(ph)HRASLEDAPVDDLTR ddPTM_A549_PD325901_60min_R1 1 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPSPDQIS(0.707)HRAS(0.293)LEDAPVDDLTR 140.46 5.7025e-26 30715000.0 1058.5 983.85 1263.4 1428.5 1438.7 1120.2 1198.3 1210.7 940.69 1557.2 1442.8 True False 1165.9581407734843 1066.762492321875 1349.1419214413752 1516.7352006411115 1337.650675245556 1111.0774626011269 1243.9019622349197 1186.5516387242244 901.156070637594 1458.8781262465855 1265.3447466627601 0.9214549187868368 0.8430607509418844 1.0662247778715035 1.1986734877126353 1.0571432637417562 0.8780828035454368 0.9830538005674785 0.9377299284275326 0.7121822515281444 1.152949131131459 1.0 10.305314789376483 -7.944217903220291 1.5095540943835133 0.8666144548137431 1.0099529221654424 0.0 0.1410897964975477 0.5242321158041026 2.4071506723129463 0.024320844188340716 0.03561167787776889 1.1370566350763423e-08 7.944217903220291 0.1433384673516993 SCTPSPDQISHRAS(ph)LEDAPVDDLTR ddPTM_A549_MK2206_60min_R1 4 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPSPDQIS(0.041)HRAS(0.959)LEDAPVDDLTR;SCTPSPDQIS(0.01)HRAS(0.99)LEDAPVDDLTR;S(0.002)CT(0.008)PS(0.026)PDQIS(0.073)HRAS(0.892)LEDAPVDDLTR;SCTPSPDQIS(0.004)HRAS(0.996)LEDAPVDDLTR 210.51 6.817999999999999e-81 55534600.0 3431.46 4154.700000000001 3972.14 3210.08 4414.76 3760.96 3891.0099999999998 3301.77 5787.5199999999995 5834.23 5358.920000000001 True False 4010.6065568577205 4366.156483841499 4535.449180621544 3996.5497441059683 3765.35465219721 4158.942290876804 4597.956150950759 3769.806008746547 4476.655960770321 4516.273390951286 4028.152265332115 0.9956442290860255 1.0839104870534273 1.1259378697412779 0.9921545862359449 0.9347597618400262 1.0324689874983923 1.1414553989238698 0.9358648234802346 1.111342289440796 1.1211774266380485 1.0 11.975902503331424 SCTPSPDQISHRAS(ph)LEDAPVDDLTR ddPTM_A549_PD325901_60min_R1 3 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPSPDQISHRAS(1)LEDAPVDDLTR;SCTPSPDQIS(0.143)HRAS(0.857)LEDAPVDDLTR;SCTPS(0.002)PDQIS(0.024)HRAS(0.974)LEDAPVDDLTR 146.88 1.0002999999999999e-32 53066000.0 5527.0 6245.15 5750.5599999999995 5774.299999999999 6388.99 6104.27 5972.83 6966.5 6199.87 7625.7 7677.74 True False 6088.096971237649 6771.450707855827 6140.827582526447 6130.965396613216 5940.249383218952 6054.5588489842685 6200.129314107985 6827.547692386472 5939.311024528695 7144.212000589894 6733.426653203865 0.9041602864034826 1.005647058564731 0.9119914567725409 0.9105267959956186 0.8822030281405817 0.8991794461893217 0.9207985225706544 1.0139781784268525 0.8820636698704786 1.0610068793413785 1.0 12.717125166535286 -11.032649901451313 1.2877422505206184 1.0005536968501207 0.9223944156381645 0.39462481893122425 0.0465968445454406 0.46341481779961297 1.353085091072265 0.03198666510047343 0.006967246763894382 9.275772715101575e-12 11.032649901451313 -0.07815928121195626 SCVEEPEPEPEAAEGDGDKKGNAEGS(ph)SDEEGK ddPTM_A549_MK2206_60min_R1 1 SCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGK 32 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 SCVEEPEPEPEAAEGDGDKKGNAEGS(0.825)S(0.175)DEEGK 134.73 1.3247e-30 6965100.0 1036.3 1522.2 583.87 1035.6 1678.6 1337.9 1577.6 1343.3 1740.1 1228.1 1562.2 True False 1211.2021048975232 1599.6734781581174 666.6715455873916 1289.3220464898498 1431.680163627974 1479.475689973857 1864.2294992148352 1533.7168886837176 1345.970128368703 950.671357047507 1174.262625473385 1.031457596131229 1.3622791388027315 0.567736323310668 1.0979844018880192 1.2192163256927429 1.2599189124131667 1.5875745840614668 1.306110622455879 1.1462258094317672 0.8095900665017411 1.0 10.197539389954548 -4.968794876561722 17.401443954103957 1.125254603517381 0.7039786130609478 0.011477046522661793 0.2623210176786437 63991646.7975077 920170570.5183585 0.033924759534666345 818025364.6184026 1.07449679257242e-05 4.968794876561722 -0.42127599045643316 SCVEEPEPEPEAAEGDGDKKGNAEGS(ph)SDEEGK ddPTM_A549_PD325901_60min_R1 1 SCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGK 32 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 SCVEEPEPEPEAAEGDGDKKGNAEGS(0.828)S(0.172)DEEGK 77.433 3.0160000000000004e-06 7852800.0 1432.5 1360.2 1329.1 1265.2 1252.2 1398.4 1319.4 983.97 1440.2 1271.4 1141.8 True False 1577.926345449237 1474.828827622316 1419.3007185275708 1343.3485305223203 1164.249791855484 1387.0118940380419 1369.6104890033828 964.3439464404673 1379.6734024304087 1191.1235870215191 1001.3658384665506 1.5757740925789987 1.4728171972401283 1.4173648271255468 1.3415162360436297 1.1626617836677624 1.3851200438014277 1.367742373856838 0.9630286049274689 1.3777915617165275 1.189498923635697 1.0 9.967753428584091 -9.808884909670633 0.04326843765569338 9.344408452663696e-21 2.3859397432544913 0.48609331906966347 0.1321362292701336 64.07541325863549 1.0471156756850588 32.105548913874884 25.37633234726235 1.5527984552224517e-10 9.808884909670633 2.3859397432544913 SCVEEPEPEPEAAEGDGDKKGNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A549_MK2206_60min_R1 1 SCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAK 40 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 SCVEEPEPEPEAAEGDGDKKGNAEGS(0.943)S(0.057)DEEGKLVIDEPAK 125.56 1.3037999999999999e-22 46989000.0 3063.0 3131.5 3031.6 1849.9 3681.7 2355.4 2031.8 2461.8 4371.3 4362.0 3638.0 True False 3579.959516839828 3290.879974282057 3461.526465827557 2303.1255830451655 3140.1268071185 2604.646864612018 2400.951759954809 2810.767688946308 3381.2075295316977 3376.62117045943 2734.5841963078806 1.309142180252975 1.2034297494753547 1.2658328350252162 0.8422214924502043 1.1483013802822988 0.9524836968372382 0.8779951859578768 1.0278592601907404 1.2364612997094258 1.2347841309908834 1.0 11.417105767212231 SCVEEPEPEPEAAEGDGDKKGNAEGS(ph)SDEEGKLVIDEPAK ddPTM_A549_PD325901_60min_R1 1 SCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAK 40 3 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 SCVEEPEPEPEAAEGDGDKKGNAEGS(0.78)S(0.22)DEEGKLVIDEPAK 182.68 1.6442e-81 77854000.0 4406.9 4213.9 4621.0 4250.6 5275.5 4985.0 4761.9 5080.8 4519.0 4553.6 5534.7 True False 4854.285243811687 4569.020141683333 4934.608848330378 4513.149908186987 4904.967079486986 4944.40381277148 4943.116710311663 4979.459458189506 4329.082145245815 4266.084918877764 4853.966987354014 1.0000655662592066 0.9412960890724947 1.0166135989771787 0.9297858679189714 1.0105068889561553 1.018631528737851 1.018366363675301 1.0258535896849805 0.8918647688631431 0.8788862656034017 1.0 12.244948581172846 SCVEEPEPEPEAAEGDGDKKGNAEGSS(ph)DEEGK ddPTM_A549_MK2206_60min_R1 1 SCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGK 32 2 P51858-2;P51858;P51858-3 P51858-2 HDGF Hepatoma-derived growth factor 1 SCVEEPEPEPEAAEGDGDKKGNAEGS(0.456)S(0.544)DEEGK 77.044 3.1413999999999997e-06 6308300.0 743.06 934.43 783.03 829.81 1432.5 1000.2 1047.3 1019.3 1604.5 1147.7 1405.5 True False 868.470361927196 981.98849572677 894.0754283338676 1033.1134872515868 1221.7811476212755 1106.0405001209735 1237.5808535292203 1163.7888964753306 1241.0833118599978 888.4337728877321 1056.4755601733718 0.8220449148721212 0.9294947585589408 0.8462812222434624 0.9778867833743818 1.1564689176726213 1.0469153682452133 1.171424025489173 1.101576733383542 1.1747392544095683 0.8409411503489362 1.0 10.045043677941088 -6.523498903403873 4.0142978769110025 1.093965627988242 0.874932497674693 0.459783804084821 0.09468724657246429 0.10043258286963758 3.7063577713378457 0.010305267757440041 0.023508160409083625 2.99571915662698e-07 6.523498903403873 -0.21903313031354887 SCWPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SCWPSSPR 8 0 D6RC00 D6RC00 IRX4 1 S(0.051)CWPS(0.522)S(0.428)PR 52.716 0.026545 26232000.0 930.19 716.58 595.97 420.9 228.92 113.08 99.006 206.25 257.42 1097.5 1147.3 True False 1087.1833310379502 753.0508612393536 680.4875075337283 524.0205188949191 195.2461712484903 125.04605054357103 116.99410864557817 235.48656911413423 199.1147810152701 849.5739877531461 862.3937461308502 1.2606577168672939 0.873210021081361 0.7890682308246685 0.6076348782049377 0.2264002633651587 0.14499879098682367 0.13566205595816874 0.273061545460702 0.23088616065295375 0.9851346807241816 1.0 9.752202905830446 -5.600091736278347 1.3075452371444924 0.5032626999962241 1.3230233053091225 0.4106897007922248 0.29822452463259747 0.8035399147822617 1.7688726225490983 0.05430970271561885 0.7407326976527557 2.5113559002983376e-06 5.600091736278347 0.8197606053128984 SCWPSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SCWPSSPR 8 0 D6RC00 D6RC00 IRX4 1 S(0.015)CWPS(0.214)S(0.771)PR 55.37 0.021008000000000002 4801400.0 958.59 621.95 479.72 385.88 254.23 191.85 145.67 81.15100000000001 212.82 1057.9 1049.8 True False 1120.3765567246135 653.6045984367634 547.7515094955788 480.42061732281127 216.83310377644452 212.15143966027676 172.13635341697847 92.6544027645145 164.6166098037051 818.9196552565411 789.1056869939566 1.4198054521601666 0.8282852464625172 0.694142139036154 0.6088165694926624 0.2747833494933425 0.26885047612374074 0.21814106304659894 0.11741697505371558 0.2086116125088398 1.0377819711021963 1.0 9.62407472688416 -3.7412155697779936 15.491563603511187 0.5743557811817749 0.9308189132629354 0.0 0.4093527484831982 0.0 0.0 0.05777101184960381 0.0 0.0001814614722952484 3.7412155697779936 0.35646313208116054 SCWPSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SCWPSSPR 8 0 D6RC00 D6RC00 IRX4 1 S(0.001)CWPS(0.012)S(0.987)PR;S(0.005)CWPS(0.072)S(0.923)PR 81.296 0.0037488 106406000.0 4113.9 4064.1 3342.2 3317.6000000000004 3489.1000000000004 2927.8999999999996 1867.15 2330.6 3270.6 3990.2 4818.799999999999 True False 4531.540099506884 4406.595969960188 3569.0217902812783 3522.5206171837294 3244.03765274155 2904.0561531421495 1938.2054149936853 2284.1143546796693 3133.1480558178723 3738.258091028209 4226.118148890007 1.0722700927557114 1.0427053420448227 0.8445153837496673 0.8335121009593454 0.7676164126158183 0.6871687091627814 0.45862546826873646 0.540475744929089 0.741377298370325 0.8845607148986274 1.0 12.04511738568672 -5.786694123446688 2.5797817869126836 0.7978073201810021 1.0764178269478684 0.35537178088785715 0.14999478589947884 0.3375085402756752 4.3836023591029205 0.026891242783828317 0.1269663298148949 1.6342025226040766e-06 5.786694123446688 0.2786105067668663 SDADSGFLGLRPT(ph)SVDPALR ddPTM_A549_MK2206_60min_R1 2 SDADSGFLGLRPTSVDPALR 20 1 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADS(0.001)GFLGLRPT(0.499)S(0.499)VDPALR;SDADSGFLGLRPT(0.5)S(0.5)VDPALR 91.729 1.3363999999999998e-06 25308000.0 923.9300000000001 1099.51 1092.4699999999998 942.0500000000001 1692.3899999999999 1007.4200000000001 1165.88 1249.83 1297.88 1384.57 1769.36 True False 1079.8667960802552 1155.4703626130809 1247.3986733482745 1172.8522922902318 1443.4416728954768 1114.024515728726 1377.705304604839 1426.9972299438473 1003.9122522884737 1071.7946753743724 1329.9790801482445 0.81194269308348 0.8687883740880253 0.9379084919209667 0.8818576997162251 1.0853115619943325 0.837625593031548 1.0358849437325546 1.0729471246907047 0.754833115252139 0.8058733339286105 1.0 10.377187837754155 -5.463933153830533 2.902945011529031 0.9175675591354022 0.811298615592263 0.09999970271273484 0.10457007859896895 0.6798524456850887 9.868067646477556 0.016182485376716776 0.13254624365138828 3.436108320632029e-06 5.463933153830533 -0.1062689435431392 SDADSGFLGLRPT(ph)SVDPALR ddPTM_A549_PD325901_60min_R1 2 SDADSGFLGLRPTSVDPALR 20 1 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADSGFLGLRPT(0.5)S(0.5)VDPALR;SDADSGFLGLRPT(0.568)S(0.432)VDPALR 105.92 4.4817e-10 41367000.0 2259.8 1720.13 1933.98 2006.6 2316.1 2129.6 1876.8799999999999 2147.54 2428.2 2252.6 2317.0 True False 2489.2132324231648 1865.0913918967603 2065.231512766498 2130.5431246807525 2153.4251261112327 2112.2572436666296 1948.3056954681442 2104.705629987461 2326.1511982929587 2110.370451568879 2032.023688673144 1.2249922312906465 0.917849236843599 1.0163422426020228 1.0484834092027435 1.059744105403299 1.0394845569176785 0.9588006804882943 1.0357682549270755 1.1447461027444379 1.0385560283241055 1.0 10.988701505341096 -8.55760307917858 24.9981120958752 1.0695052103505445 1.0311985496264817 0.009672994923868528 0.07891221252549253 499.1502810777909 359337.00005526334 0.013918515213318288 0.015782153986356493 2.769471630990413e-09 8.55760307917858 -0.03830666072406275 SDADSGFLGLRPT(ph)SVDPALRR ddPTM_A549_MK2206_60min_R1 2 SDADSGFLGLRPTSVDPALRR 21 2 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADSGFLGLRPT(0.5)S(0.5)VDPALRR;SDADSGFLGLRPT(0.5)S(0.5)VDPALRR 104.41 3.2466e-10 24739000.0 672.46 1155.87 628.45 693.5699999999999 1272.27 755.83 687.79 700.78 1155.25 1391.1599999999999 1308.6399999999999 True False 785.9548079314759 1214.6988458800574 717.5736599318279 863.4946811355406 1085.120768365878 835.8114289206515 812.7525401020364 800.1177110487422 893.5877195551659 1076.8959897974194 983.6685713733776 0.7990036794955664 1.234865971354681 0.7294872285387409 0.8778309140546671 1.1031365644333384 0.8496880486419414 0.8262463229533583 0.8134017232365516 0.908423574321946 1.0947752333836178 1.0 9.942028498246872 -10.458945431104736 1.045218971839696 0.9946315183121519 0.909208018738913 0.10933636842844696 0.14122709082218646 1.17625267736149 2.4790296171795094 0.06314166120451743 0.02347080114020024 3.475798319402649e-11 10.458945431104736 -0.08542349957323891 SDADSGFLGLRPT(ph)SVDPALRR ddPTM_A549_PD325901_60min_R1 2 SDADSGFLGLRPTSVDPALRR 21 2 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADSGFLGLRPT(0.5)S(0.5)VDPALRR;SDADSGFLGLRPT(0.5)S(0.5)VDPALRR 127.28 8.2777e-18 38738000.0 1476.24 1821.5500000000002 1555.4699999999998 1769.3400000000001 1982.73 2017.23 1767.5 1856.4099999999999 1955.6000000000001 1812.14 2161.8999999999996 True False 1626.1067980495498 1975.058411230282 1661.033548000962 1878.62811333731 1843.469884847168 2000.8023476904748 1834.7631797131116 1819.3824462245277 1873.412932782189 1697.7211711382538 1896.0000054132367 0.857651262345401 1.0416974713034426 0.8760725439127499 0.990837609690755 0.972294240286872 1.0552754968238496 0.9677020962419363 0.9595898950580382 0.9880869870429537 0.8954225560607171 1.0 10.888743253017273 -5.245619571887362 24.432384665943548 0.9874647760688147 0.8576511289301346 0.2652380441500778 0.052211191548895884 1562.1411495143943 2412545.997834593 0.005513174159462523 0.19043812015367867 5.680419741866342e-06 5.245619571887362 -0.12981364713868004 SDAEEDGGT(ph)VSQEEEDR ddPTM_A549_MK2206_60min_R1 2 SDAEEDGGTVSQEEEDR 17 0 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 S(0.382)DAEEDGGT(0.427)VS(0.191)QEEEDR;SDAEEDGGT(0.581)VS(0.419)QEEEDR 71.555 0.0010490999999999999 4396000.0 287.1 401.52 278.46 466.87 692.53 474.01 556.52 610.05 805.6700000000001 297.92 475.36 True False 335.5554610789144 421.9556529694175 317.94981517163944 581.2531709585908 590.6597543889436 524.1694235776274 657.6324802884384 696.5264556997705 623.1870313906169 230.61966508557396 357.3149927314224 0.9391026626501965 1.1809066553403276 0.8898306022401584 1.626724830422922 1.6530505755545386 1.46696733761637 1.8404838690403094 1.9493345363857095 1.7440830753470187 0.6454239810164372 1.0 8.481052639621435 -6.260310536168996 24.995476549498587 1.4805895572174312 1.0210426307530553 0.26300457084040263 0.3628064458551111 112.64946216919236 2494302.6549960175 0.050834142339370926 0.1267612356887376 5.491480728250289e-07 6.260310536168996 -0.4595469264643759 SDAEEDGGT(ph)VSQEEEDR ddPTM_A549_PD325901_60min_R1 1 SDAEEDGGTVSQEEEDR 17 0 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGT(0.5)VS(0.5)QEEEDR 55.213 0.012098000000000001 1075900.0 0.0 142.78 142.44 0.0 0.0 135.33 172.44 0.0 110.48 0.0 0.0 True False 0.0 154.81257168645357 152.10683496130252 0.0 0.0 134.22791734851853 179.00229856278867 0.0 105.83690980454915 0.0 0.0 0.0 SDAEEDGGT(ph)VSQEEEDRKPK ddPTM_A549_MK2206_60min_R1 1 SDAEEDGGTVSQEEEDRKPK 20 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 S(0.002)DAEEDGGT(0.957)VS(0.04)QEEEDRKPK 92.01 1.1271e-06 27236000.0 735.76 1140.8 989.19 877.5 1195.6 1006.1 956.09 880.67 1536.1 891.02 1120.6 True False 859.9383003950609 1198.8618472492312 1129.4720163385548 1092.4875393924715 1019.7288238017431 1112.5648342048707 1129.799177170584 1005.5076694387614 1188.1758026476434 689.7379631597344 842.3240930133626 1.0209114372102126 1.4232785897888505 1.3408995726311688 1.296991916121222 1.2106133877207834 1.3208275097827709 1.3412879751887388 1.1937301541994596 1.410592208513255 0.8188510442485852 1.0 9.718231621903573 -10.932457092707269 1.1418099404485886 0.9969503079213009 1.2989518056960325 0.5523885542791136 0.12314052545765251 0.3127603824883644 0.7123387094305912 0.0758695735230218 0.01709805247884558 1.1682691464558172e-11 10.932457092707269 0.3020014977747316 SDAEEDGGTVS(ph)QEEEDR ddPTM_A549_MK2206_60min_R1 3 SDAEEDGGTVSQEEEDR 17 0 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGT(0.011)VS(0.989)QEEEDR;SDAEEDGGT(0.01)VS(0.99)QEEEDR;SDAEEDGGT(0.079)VS(0.921)QEEEDR 137.52 1.4072e-12 80454300.0 837.69 616.89 315.96 710.76 882.62 905.6700000000001 805.19 887.5899999999999 1053.17 710.55 607.51 True False 979.0715924458233 648.2870660497708 360.76787905491335 884.8962319072292 752.7877671996438 1001.507398264909 951.4826004518216 1013.4086006303726 814.6286765669021 550.0362615015932 456.648500576966 2.14403768151825 1.4196631878363193 0.7900340822297468 1.9378060604363772 1.6485059432988654 2.1931691377493303 2.0836214270924853 2.2192312015695914 1.7839293801197977 1.2045068817846412 1.0 8.83494028592495 -10.474127453114699 0.935203439423794 1.0268817943914312 1.7843188626767312 0.30500442545329254 0.40206774308690646 0.5027589920732082 0.8271118466236701 0.23442791608898156 0.07804618068333247 3.3563909923042295e-11 10.474127453114699 0.7574370682853 SDAEEDGGTVS(ph)QEEEDR ddPTM_A549_PD325901_60min_R1 5 SDAEEDGGTVSQEEEDR 17 0 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGT(0.004)VS(0.996)QEEEDR;SDAEEDGGT(0.012)VS(0.988)QEEEDR;SDAEEDGGT(0.015)VS(0.985)QEEEDR;SDAEEDGGT(0.008)VS(0.992)QEEEDR;SDAEEDGGT(0.001)VS(0.999)QEEEDR 186.83 2.3118999999999997e-39 167278400.0 1962.25 2084.32 2114.41 1742.26 2547.11 2296.4 2299.69 2042.2199999999998 1723.52 1656.13 1890.5700000000002 True False 2161.4561754678984 2259.972961321677 2257.906577580228 1849.875443240451 2368.20978065247 2277.6988797689946 2387.205961388654 2001.4863200094035 1651.0864481022495 1551.5616691630858 1658.0418753106553 1.3036197744178941 1.3630373243125975 1.3617910447268893 1.1156988679154156 1.4283172312573562 1.3737281993208035 1.4397742282241095 1.2071385830556296 0.9958050352575669 0.9357795434885388 1.0 10.695264728492202 -8.614888655252335 3.4235301667398383 0.9975772041324421 1.3383152608610103 0.7824760851621015 0.08347601110678879 0.07558921354052345 1.7579825518374763 0.013796323001530105 0.01570541709908193 2.4272323109721736e-09 8.614888655252335 0.34073805672856816 SDAEEDGGTVS(ph)QEEEDRKPK ddPTM_A549_MK2206_60min_R1 5 SDAEEDGGTVSQEEEDRKPK 20 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGT(0.002)VS(0.998)QEEEDRKPK 320.34 3.145699999999999e-184 3237397000.0 24136.4 24545.2 24433.510000000002 23416.56 32927.899999999994 24942.52 24824.579999999998 26690.01 35531.11 34017.2 35267.399999999994 True False 28210.034241675738 25794.445838974265 27898.549121936354 29153.618251209307 28084.249529325356 27581.9209108952 29334.884851431678 30473.400652227563 27483.370316523466 26332.69089402854 26509.5312492767 1.064146852556868 0.9730253468619161 1.0523969231895622 1.099740994175623 1.059401966230226 1.0404529846844335 1.106578783894267 1.1495261974147135 1.036735431422362 0.9933291783402248 1.0 14.694223539746215 -9.249599122976898 2.547017117599524 1.012797291314117 1.0661856598428574 0.2665579817434809 0.04299193507963419 0.29074451952086866 3.876397072316722 0.009059402065397732 0.008366506445087225 5.628606359337881e-10 9.249599122976898 0.053388368528740404 SDAEEDGGTVS(ph)QEEEDRKPK ddPTM_A549_PD325901_60min_R1 8 SDAEEDGGTVSQEEEDRKPK 20 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGT(0.005)VS(0.995)QEEEDRKPK;SDAEEDGGT(0.006)VS(0.994)QEEEDRKPK;SDAEEDGGT(0.002)VS(0.998)QEEEDRKPK;SDAEEDGGT(0.007)VS(0.993)QEEEDRKPK 296.49 1.0572999999999997e-144 3500750600.0 50949.4 47698.469999999994 51498.700000000004 50633.03 58530.3 50961.499999999985 52597.399999999994 54490.7 54271.17 51793.7 59491.600000000006 True False 56121.7455810341 51718.18746469503 54993.711468840396 53760.51726714556 54419.33364657327 50546.486440231485 54599.02283940162 53403.84024137278 51990.34145797749 48523.43694283187 52174.51034832423 1.0756544758418927 0.9912539115253268 1.054034069542671 1.0303981179359984 1.0430252873148649 0.9687965656558378 1.046469290749276 1.0235618865388747 0.9964701366794398 0.9300218941947459 1.0 15.671057535473913 -6.184854695334242 0.2586125262319875 0.9944657344453349 1.068493845507999 0.30657882934376113 0.03347345062590161 5.754564107843278 0.43245595589337615 0.015938993303098222 0.13077887421895795 6.533491112488606e-07 6.184854695334242 0.07402811106266416 SDAEEDGGTVS(ph)QEEEDRKPKAEEDEILNR ddPTM_A549_MK2206_60min_R1 2 SDAEEDGGTVSQEEEDRKPKAEEDEILNR 29 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGTVS(1)QEEEDRKPKAEEDEILNR;SDAEEDGGTVS(1)QEEEDRKPKAEEDEILNR 148.14 1.4444999999999998e-36 35599000.0 3972.0 4323.3 4159.2 3583.4 5252.5 4088.5 3774.6000000000004 4847.299999999999 5927.1 5733.0 5096.9 True False 4642.376493923537 4543.337503692674 4749.037101421681 4461.333160864938 4479.8642079446745 4521.142356273345 4460.395960786207 5534.419619233661 4584.621313633781 4437.911318258576 3831.1990627162295 1.2117293875699067 1.185878736478797 1.239569394249832 1.1644743819972534 1.1693112612030545 1.1800854725277476 1.1642297588222659 1.444565925350245 1.1966544255686347 1.1583609323375126 1.0 11.903580272400525 -10.325406118600641 0.9339669734607011 1.011335001085707 1.214886365458841 0.205842941032101 0.08776084669853308 0.32368258109336917 0.5469701626353746 0.038202477059114386 0.014748559729789829 4.727090113191743e-11 10.325406118600641 0.20355136437313415 SDAEEDGGTVS(ph)QEEEDRKPKAEEDEILNR ddPTM_A549_PD325901_60min_R1 1 SDAEEDGGTVSQEEEDRKPKAEEDEILNR 29 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGT(0.003)VS(0.997)QEEEDRKPKAEEDEILNR 89.266 5.3589e-10 27386000.0 1968.4 1742.3 2053.6 1740.6 1928.7 2126.6 2292.5 1905.1 2418.4 2589.4 2746.0 True False 2168.230518940507 1889.1297356023815 2192.9696452999915 1848.1129088105854 1793.2347656537886 2109.281674671982 2379.7423420041364 1867.1012859779626 2316.763058212543 2425.904842090232 2408.259408328206 0.9003309657765127 0.7844378097597883 0.9106035827022194 0.7674060786057637 0.7446186068878009 0.8758531856567012 0.9881586401259547 0.7752907678970054 0.9620072697321345 1.0073270486148647 1.0 11.233775086623375 -8.742972587754688 0.7080556370333688 0.9955974345432527 0.8284768075854838 0.4270347369790133 0.07267042183529232 0.3799058698410554 0.4006672082304657 0.019326993559281472 0.01978647158718471 1.80728819668412e-09 8.742972587754688 -0.16712062695776886 SDAES(ph)LAGVTK ddPTM_A549_MK2206_60min_R1 2 SDAESLAGVTK 11 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 SDAES(1)LAGVTK;SDAES(1)LAGVTK 142.91 2.7911e-11 7451600.0 2869.7 3298.9 2837.7 2784.7 4098.0 3052.8999999999996 2862.1000000000004 2995.7 4474.2 4122.0 4782.1 True False 3354.0352025710936 3466.7999192588445 3240.1285301751072 3466.9516250099337 3495.1896285877724 3375.955851648992 3382.1065223775263 3420.3496489464824 3460.800843829233 3190.8373371466682 3594.57259075424 0.9330831741159314 0.964454001617871 0.90139465774295 0.9644962057317841 0.9723519390254922 0.9391814371289755 0.9408925364525376 0.9515316668646825 0.9627850756807396 0.8876819862683989 1.0 11.811604523238422 -10.160304306598546 0.3675472241016833 1.0114383889811194 0.9416306284382574 0.0 0.03823788028766917 1.0355390876728001 0.23917564952955137 0.028376248842276217 0.007059665830021709 6.913463803988139e-11 10.160304306598546 -0.06980776054286197 SDAES(ph)LAGVTK ddPTM_A549_PD325901_60min_R1 2 SDAESLAGVTK 11 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 SDAES(0.999)LAGVTK;S(0.008)DAES(0.991)LAGVTK 124.12 5.4799e-06 12286200.0 8676.2 9261.4 9691.2 9005.7 9274.8 9126.400000000001 9943.2 10541.8 9535.1 10500.2 11901.900000000001 True False 9557.001436919143 10041.890680886128 10348.90310991979 9561.961635571346 8623.370044322986 9052.077624248273 10321.593917127811 10331.535529117888 9134.372906203442 9837.21558002466 10438.04175236034 0.9155933328929281 0.962047376234663 0.9914602140367571 0.9160685368411287 0.8261482612265846 0.8672199095391949 0.9888439002261898 0.9897963405618331 0.875104078227882 0.942438803504516 1.0 13.349563457438945 -11.067475441766936 1.3694855508041253 1.000157090723111 0.9211816855493052 0.055297253986780426 0.05471390369123536 0.5683311212580593 1.8958902102357036 0.04128411765373858 0.009050512200001068 8.561001206056324e-12 11.067475441766936 -0.07897540517380575 SDAGLES(ph)DTAMK ddPTM_A549_MK2206_60min_R1 5 SDAGLESDTAMK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.541)DT(0.459)AMK;S(0.005)DAGLES(0.856)DT(0.139)AMK;SDAGLES(0.99)DT(0.01)AMK;SDAGLES(0.991)DT(0.009)AMK;SDAGLES(0.857)DT(0.143)AMK 194.86 2.1955e-24 183964500.0 22638.000000000004 24548.0 21646.5 21036.800000000003 30275.3 23891.500000000004 21294.699999999997 23079.499999999996 31630.7 32647.800000000003 32658.899999999998 True False 26458.740954038527 25797.38834701448 24716.29919598107 26190.816944377828 25821.843475447404 26419.68267210584 25163.67134693849 26351.089803004426 24466.39695384859 25272.639305118148 24548.793790214266 1.0778020777780786 1.0508617477286373 1.006823366035751 1.066888139930448 1.0518579322516695 1.076211030891357 1.0250471596274244 1.0734168867192406 0.9966435484745275 1.0294859910873675 1.0 14.583364518727796 -8.774649383550804 24.998986373005867 0.9984150023597308 1.0521471460614054 0.4175827039850303 0.02270040697969991 108.43485903772009 205204.5621926326 0.0033820713026971516 0.00361041594201236 1.6801599044953264e-09 8.774649383550804 0.05373214370167456 SDAGLES(ph)DTAMK ddPTM_A549_PD325901_60min_R1 4 SDAGLESDTAMK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.81)DT(0.19)AMK;SDAGLES(0.941)DT(0.059)AMK;SDAGLES(0.864)DT(0.136)AMK;SDAGLES(0.733)DT(0.267)AMK 198.37 1.5988999999999998e-24 247049000.0 36410.8 44424.7 39334.5 43247.5 45562.2 44298.9 41462.899999999994 46181.299999999996 41604.5 46308.4 46486.0 True False 40107.19761178576 48168.52537749818 42003.975707563535 45918.79985280118 42362.06825305696 43938.14444565348 43040.793348869476 45260.17774297101 39856.007548546026 43384.47972095904 40768.516699033135 0.9837786816692535 1.1815128260146033 1.0303042423066548 1.1263299126575825 1.0390877982092888 1.0777469479701605 1.0557360638507172 1.1101747477617796 0.9776173080511229 1.064166254593902 1.0 15.315167847048512 -8.769833329446675 24.999860206804765 0.9894303891557837 1.0774910493067367 0.16352863307860732 0.05482821817067987 118.71803700516908 353579.6281115739 0.007580817727422158 0.008136107739899073 1.6988955178225522e-09 8.769833329446675 0.08806066015095293 SDAGLES(ph)DTAMKK ddPTM_A549_PD325901_60min_R1 1 SDAGLESDTAMKK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.979)DT(0.021)AMKK 86.37799999999999 9.517899999999999e-05 9916400.0 4071.1 4011.5 3979.9 3933.4 4660.4 4390.0 3573.5 4449.4 5231.4 5184.6 5043.0 True False 4484.39507501458 4349.563183360473 4249.999947082897 4176.357184600457 4333.069581507187 4354.249295499859 3709.4914979942314 4360.653226513226 5011.542450683547 4857.243471190627 4422.742970210907 1.013939789225584 0.9834537554311134 0.960942106676443 0.9442911814523329 0.9797244856172496 0.9845133042610926 0.8387309692150927 0.9859612588577086 1.1331299341694647 1.098242313402852 1.0 12.110725686433598 -8.550194550441265 15.472662384229196 1.0626953531401273 0.9569436244176777 0.4975834954910022 0.051817893193435986 2.556991893861935 1447.6908801180077 0.010409051440077251 0.011806296083400634 2.8171206659825457e-09 8.550194550441265 -0.10575172872244964 SDALETLGFLNHYQMK ddPTM_A549_PD325901_60min_R1 2 SDALETLGFLNHYQMK 16 0 P14866;M0QXS5;A0A3B3ITJ4;P14866-2;M0R076;M0QYT0 P14866;M0QYT0 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ; 105.46 5.488999999999999e-10 2468400.0 2390.5 2291.8 2871.1 2999.3 3165.9 2850.9 2939.9 2905.9 2933.5 3230.2 2975.4 False True 2633.1818002069126 2484.9380290727986 3065.9501113268443 3184.5599490954764 2943.538105762081 2827.6832156128835 3051.7795032750078 2847.9395448655514 2810.215196521043 3026.2446207306184 2609.444662614622 1.0090966242482056 0.9522861567728861 1.1749435254376352 1.2203975791173123 1.128032392460357 1.0836340989042434 1.169513018228627 1.091396796286901 1.0769399469484255 1.1597274562237199 1.0 11.34952709232354 -9.877077535582679 0.7621627394249784 1.0067058541324188 1.106265011086145 0.0 0.08492109143903831 0.710520791804075 0.8519194512546362 0.03363785509326291 0.016346742572955982 1.3271574961281966e-10 9.877077535582679 0.09955915695372619 SDAS(ph)GDRGFGLVDVR ddPTM_A549_MK2206_60min_R1 1 SDASGDRGFGLVDVR 15 1 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.1)DAS(0.9)GDRGFGLVDVR 41.912 0.024091 1236300.0 339.11 278.65 271.05 391.46 440.11 171.28 381.74 380.73 540.31 598.44 623.41 True False 396.3434775564983 292.8320947896197 309.4889657483044 487.36771757330695 375.3704020101917 189.40473591353765 451.09721667740337 434.69964343672393 417.9306476977726 463.2519883653696 468.6000917592896 0.8458032435898283 0.6249083172182596 0.6604543430334678 1.0400504100277852 0.8010463689858001 0.4041926991572828 0.9626485880184652 0.9276559076305524 0.8918706057626107 0.9885870628538689 1.0 8.872213426478247 SDAS(ph)GDRGFGLVDVR ddPTM_A549_PD325901_60min_R1 1 SDASGDRGFGLVDVR 15 1 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.092)DAS(0.908)GDRGFGLVDVR 50.787 0.006324499999999999 2466100.0 475.5 490.28 599.88 429.15 431.82 624.06 439.24 529.87 440.31 531.43 490.25 True False 523.7724099554011 531.5976162378099 640.591464171484 455.65762082963477 401.49045289812733 618.9778622664331 455.9555185613506 519.3013271750265 421.8053019192707 497.8754191055886 429.9523579508027 1.2182103441687224 1.2364105148101967 1.4899126666605782 1.0597863051649397 0.9338021887161457 1.439642906522354 1.0604791673535217 1.2078113250734805 0.9810512586316267 1.157978110594658 1.0 8.748032996668424 -8.760220765217271 24.834877502230817 0.9910519725220379 1.2052733512810954 0.1414043184488668 0.159819446396148 26.876065389515798 547722.4509834169 0.025212112485101735 0.027818296271935713 1.7369176757264347e-09 8.760220765217271 0.21422137875905745 SDAS(ph)PSSIR ddPTM_A549_PD325901_60min_R1 2 SDASPSSIR 9 0 P33992;B1AHA9 P33992 MCM5 DNA replication licensing factor MCM5 1 S(0.345)DAS(0.571)PS(0.078)S(0.006)IR;S(0.019)DAS(0.793)PS(0.094)S(0.094)IR 52.57899999999999 0.023656 2339500.0 662.76 662.09 731.5 674.99 756.06 848.77 862.47 881.75 931.56 831.5 883.92 True False 730.0429073018753 717.8866479050572 781.1439888668407 716.6825992864854 702.9569538654026 841.8578985287969 895.2917678116928 864.1628045305068 892.4097727871632 778.9989480953221 775.203443630542 0.9417436329782483 0.9260622534685209 1.0076632080070196 0.92450905007596 0.9068031877841197 1.0859831769916932 1.154912010734545 1.1147561477324428 1.151194283409919 1.004896139840407 1.0 9.598431169322444 -7.270571959428981 24.069278269133957 1.0845441565053244 0.9432543612789134 0.6536515697881291 0.05215942269523741 237.13820415098195 624986.8229634024 0.009685771867982012 0.015623694995608015 5.363249989360418e-08 7.270571959428981 -0.14128979522641105 SDASDMNS(ph)DTSPSCR ddPTM_A549_PD325901_60min_R1 1 SDASDMNSDTSPSCR 15 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.001)DAS(0.044)DMNS(0.306)DT(0.306)S(0.306)PS(0.038)CR 51.092 0.0078491 2272900.0 246.78 299.8 280.76 163.61 392.21 0.0 233.33 212.45 120.27 237.68 475.9 True False 271.8329239301658 325.0651981481916 299.8140619470325 173.71581811473044 364.66252265104583 0.0 242.2095008330752 208.2125180861991 115.21547015019115 222.67284423727742 417.3673169786577 0.6513038105091159 0.778846797351921 0.7183458065605162 0.41621806751009566 0.8737208396930923 0.0 0.580326946983874 0.4988711612434334 0.27605292859115454 0.5335176837736528 1.0 8.705173820749405 -10.99477779850921 1.2825400045843742 0.9989601096653778 0.5096436846817253 0.0 0.2684984305570106 0.3916475937733312 1.150491218828164 0.16551912936651103 0.03816834576968604 1.012097149012022e-11 10.99477779850921 -0.4893164249836526 SDASDMNSDT(ph)SPSCR ddPTM_A549_MK2206_60min_R1 1 SDASDMNSDTSPSCR 15 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 SDAS(0.001)DMNS(0.042)DT(0.475)S(0.475)PS(0.006)CR 51.927 0.0097147 2314900.0 186.52 172.92 220.11 141.47 298.91 0.0 125.39 0.0 248.74 258.33 293.56 True False 218.00001602382142 181.72088939896315 251.324907769265 176.13015635082965 254.94073496368262 0.0 148.1717399255504 0.0 192.40078715615832 199.97307358202295 220.66095015616867 0.9879410737130243 0.8235298962972541 1.1389641329442046 0.7981935916897703 1.1553504812847633 0.0 0.6714905370464717 0.0 0.8719294783240544 0.906245864710071 1.0 7.78568753166836 -8.984061128987262 24.91652428506502 0.9434986903182774 0.6933084390453932 0.07360561686931288 0.3684449057258315 175.80655250453904 274835.6030174166 0.06636892475000011 0.06700222284870036 1.0373823890996913e-09 8.984061128987262 -0.2501902512728842 SDASDMNSDT(ph)SPSCR ddPTM_A549_PD325901_60min_R1 1 SDASDMNSDTSPSCR 15 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 SDAS(0.007)DMNS(0.075)DT(0.434)S(0.434)PS(0.05)CR 60.434 0.0026436999999999997 2533000.0 275.68 307.12 328.89 284.05 246.51 261.61 175.49 194.21 157.69 219.55 174.41 True False 303.66683065511023 333.0020802377336 351.2104531762341 301.5951233756444 229.19598801333285 259.479534896519 182.1683679818127 190.33632919520235 151.0628376817465 205.6875755313626 152.95867567608258 1.985286740440792 2.177072197872092 2.2961133235749585 1.9717425117770118 1.498417706614409 1.6964028601163719 1.1909645999262368 1.2443643902767154 0.9876055543371017 1.3447264407998858 1.0 7.256998127333775 -7.326292910740129 0.7239971624718279 0.9868392830022154 2.2015911778693917 0.8442418348681373 0.17705528067587503 0.12189384105266966 0.12474391862612792 0.026190649640113518 0.06798199625427022 4.7174476478984885e-08 7.326292910740129 1.2147518948671765 SDATNYASHS(ph)PPVNR ddPTM_A549_MK2206_60min_R1 2 SDATNYASHSPPVNR 15 0 Q96FJ0;Q96FJ0-2 Q96FJ0 STAMBPL1 AMSH-like protease 1 SDATNYAS(0.009)HS(0.991)PPVNR;SDATNYAS(0.044)HS(0.956)PPVNR 73.809 0.0002345 39925000.0 1245.75 1620.63 1268.62 1417.06 1554.28 1176.87 1241.9 1393.8 1868.08 1935.72 2220.29 True False 1456.002144336669 1703.1131447295945 1448.5293920959737 1764.2397636142414 1325.6474709422655 1301.4056022569189 1467.53715458602 1591.3754183334813 1444.9628627107666 1498.4395075840744 1668.9307161133672 0.8724161705930072 1.02048163431004 0.8679386017109999 1.057107851500769 0.794309469017057 0.7797840795258735 0.8793277877967542 0.9535299476298825 0.8658015870639731 0.8978440465603417 1.0 10.70470834865295 -4.929704172963841 17.688128389391206 0.9222236867933525 7.013097042771503e-05 0.003368556098659159 0.08533007390866994 97.45282018457173 90146.1582707929 0.011933571599073503 9266.157265508082 1.175698128923836e-05 4.929704172963841 -0.9221535558229248 SDATNYASHS(ph)PPVNR ddPTM_A549_PD325901_60min_R1 2 SDATNYASHSPPVNR 15 0 Q96FJ0;Q96FJ0-2 Q96FJ0 STAMBPL1 AMSH-like protease 1 SDAT(0.001)NY(0.008)AS(0.151)HS(0.839)PPVNR;SDAT(0.001)NY(0.002)AS(0.491)HS(0.506)PPVNR 113.23 4.2671000000000004e-07 66523000.0 5854.2 5486.6 5377.5 6332.299999999999 6737.3 6266.3 6263.5 6068.9 6076.9 6289.9 7996.8 True False 6448.514074365737 5948.975037224373 5742.44948753443 6723.431789303266 6264.095290423221 6215.269330385141 6501.860920018709 5947.8510285400525 5821.509025989 5892.754640558954 7013.244295891843 0.9194766077296197 0.8482486544364514 0.8188007212151717 0.9586763993436902 0.8931808199084906 0.8862188550919106 0.9270831936978601 0.8480883850038039 0.8300736122081293 0.8402323364110901 1.0 12.775866267675616 -10.929654656340261 1.1816931429477648 1.0001255054629699 0.877063307487759 0.0 0.06198247142012817 0.3035221543346485 0.7518787930101055 0.03032729488755262 0.007110235059546956 1.1758321852452121e-11 10.929654656340261 -0.1230621979752109 SDATSGILNST(ph)NIQS ddPTM_A549_MK2206_60min_R1 2 SDATSGILNSTNIQS 15 0 O43663-2;O43663-4;O43663 O43663-2 PRC1 Protein regulator of cytokinesis 1 1 SDATSGILNS(0.143)T(0.854)NIQS(0.003);SDATSGILNS(0.087)T(0.912)NIQS 116.51 9.84e-07 11411400.0 2003.3899999999999 2414.7 2100.19 1812.3000000000002 2483.3 1883.71 2263.5 2027.16 3425.3 3134.8999999999996 3316.5 True False 2341.5132538170897 2537.597915982399 2398.028522320353 2256.3135813572394 2118.009859607618 2083.0429418945014 2674.7486507814274 2314.516137917133 2649.4750190801196 2426.723912717391 2492.921519256485 0.9392647284441777 1.0179213009237607 0.9619350243466814 0.9050880919950444 0.8496095216985874 0.8355830401415002 1.0729373669088356 0.9284352194959745 1.0627992091264575 0.9734457719475912 1.0 11.283621750098128 -7.774361169976044 24.995074499180905 1.0241576977540432 0.9210344930596713 0.3354551699322388 0.06048347246468497 179.42454903508556 347066.6109876729 0.009829101596443214 0.013626896808628643 1.6812752896296486e-08 7.774361169976044 -0.10312320469437186 SDATSGILNST(ph)NIQS ddPTM_A549_PD325901_60min_R1 1 SDATSGILNSTNIQS 15 0 O43663-2;O43663-4;O43663 O43663-2 PRC1 Protein regulator of cytokinesis 1 1 SDATSGILNS(0.17)T(0.83)NIQS 122.46 4.3411999999999997e-07 9589500.0 3409.4 2797.0 2413.1 3471.7 3243.0 3119.8 2816.4 3818.0 3653.6 3498.4 3465.0 True False 3755.519778132374 3032.7130060723543 2576.8674771491096 3686.1390241972363 3015.22286774264 3094.393383166395 2923.579643193214 3741.8469948369425 3500.051897736249 3277.5104269593216 3038.826966444733 1.2358452190932523 0.9979880524821287 0.8479809826631585 1.213013792789204 0.9922324966302019 1.0182854823045986 0.9620750623434304 1.2313458568569653 1.1517772931412165 1.078544603937695 1.0 11.56929881350085 SDDDDRS(ph)SDRKDGVLEEQIER ddPTM_A549_MK2206_60min_R1 4 SDDDDRSSDRKDGVLEEQIER 21 3 Q09161;X6R941 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 SDDDDRS(0.5)S(0.5)DRKDGVLEEQIER;SDDDDRS(0.5)S(0.5)DRKDGVLEEQIER;SDDDDRS(0.5)S(0.5)DRKDGVLEEQIER;SDDDDRS(0.5)S(0.5)DRKDGVLEEQIER 100.88 3.8258999999999997e-10 47333800.0 1584.8 1560.4499999999998 1726.8100000000002 1187.3010000000002 2274.17 2043.57 1650.73 1889.4 2994.44 2010.94 2801.44 True False 1852.2754953600263 1639.8702397791576 1971.6976238473699 1478.189798299968 1939.642605574783 2259.8192209880203 1950.646273604784 2157.228236044826 2316.204121138082 1556.6672573415149 2105.765132189323 0.8796211253789027 0.778752679827221 0.9363331141291309 0.7019727773548624 0.9211106100698772 1.0731582484882967 0.9263361064283246 1.0244391471151382 1.0999346915436716 0.7392406843222246 1.0 11.040128818119005 -7.0368040462481805 5.025126066626364 1.0371245870252765 0.826460396314797 0.19598474380260344 0.11313083214017357 0.08898860331096158 5.610442154580346 0.01021183166281837 0.018395184847321274 9.187470418155032e-08 7.0368040462481805 -0.2106641907104796 SDDDDRS(ph)SDRKDGVLEEQIER ddPTM_A549_PD325901_60min_R1 4 SDDDDRSSDRKDGVLEEQIER 21 3 Q09161;X6R941 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 SDDDDRS(0.5)S(0.5)DRKDGVLEEQIER;SDDDDRS(0.5)S(0.5)DRKDGVLEEQIER;SDDDDRS(0.5)S(0.5)DRKDGVLEEQIER;SDDDDRS(0.5)S(0.5)DRKDGVLEEQIER 134.31 3.3216e-18 62957700.0 2211.46 2452.5299999999997 2482.94 2290.55 2448.45 2047.28 2131.73 2178.36 2187.96 2370.61 3117.9799999999996 True False 2435.965791209194 2659.2133102547823 2651.4472395311464 2432.0320712835132 2276.479318693946 2030.6076304535206 2212.8541516774158 2134.910900909639 2096.007650035856 2220.9292800291655 2734.4882265037063 0.8908306013530727 0.9724720276652389 0.9696319822598997 0.8893920433488532 0.8325065350910775 0.7425914695013475 0.8092388660626096 0.7807350860820192 0.7665082005914481 0.8121919335775774 1.0 11.417055135167208 -6.453594107050816 4.578842897709249 0.8581903322204536 0.9462434526070141 0.2868738476457079 0.0722442072718092 0.36815595610951923 14.7692134644084 0.014572081152270815 0.034368124004401396 3.518891635785871e-07 6.453594107050816 0.08805312038656055 SDDES(ph)PSTSSGSSDADQRDPAAPEPEEQEER ddPTM_A549_MK2206_60min_R1 1 SDDESPSTSSGSSDADQRDPAAPEPEEQEER 31 1 R4GMM6;R4GN77;R4GNG6;R4GND1;A0A1B0GX65;Q969T4 R4GMM6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 S(0.015)DDES(0.49)PS(0.082)T(0.082)S(0.082)S(0.082)GS(0.082)S(0.082)DADQRDPAAPEPEEQEER 45.408 0.0061824 889750.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SDDT(ph)LDEEDSFVMK ddPTM_A549_MK2206_60min_R1 1 SDDTLDEEDSFVMK 14 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 S(0.004)DDT(0.996)LDEEDSFVMK 77.527 0.00075639 1146000.0 1038.5 1097.1 1382.8 1035.0 1793.0 1210.5 1164.0 1158.9 1679.2 1314.0 1800.6 True False 1213.7734111126867 1152.9377039070225 1578.9018330077665 1288.5750464629157 1529.2520751727382 1338.5943065351325 1375.483732939952 1323.1776239824014 1298.8638811313872 1017.1664873873664 1353.461325968106 0.8967920898992049 0.8518438479077689 1.1665659023381456 0.9520590073316071 1.1298823585364675 0.9890155565233167 1.0162711756511358 0.9776249964408528 0.959660875571996 0.7515297761905431 1.0 10.402437948992826 SDDT(ph)LDEEDSFVMK ddPTM_A549_PD325901_60min_R1 2 SDDTLDEEDSFVMK 14 0 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 S(0.003)DDT(0.997)LDEEDSFVMK;S(0.062)DDT(0.931)LDEEDS(0.007)FVMK 85.45700000000001 0.00018359 8641100.0 5344.099999999999 4830.59 5240.92 5487.6 6286.0 5699.700000000001 5265.6 5762.700000000001 5448.4 5356.299999999999 6746.3 True False 5886.629097881512 5237.68077225708 5596.600347412167 5826.556588756152 5844.493045522742 5653.283532929515 5465.985289446884 5647.758427749307 5219.422695321371 5018.102303888124 5916.547868319225 0.9949432048715576 0.8852595954311111 0.945923276879031 0.984789900873626 0.9878214755630884 0.9555037259481349 0.9238470491745828 0.954569886604116 0.882173661311745 0.8481469964534688 1.0 12.530539935866901 -6.741976467613802 0.002395599280279722 1.8836355431988019 1.9404121293694482e-08 0.0 0.05099716380879583 255326.9287284645 155.1337991525553 60360.181992117425 61622.17462797961 1.8114382433242999e-07 6.741976467613802 -1.8836355237946807 SDDYMPMS(ph)PASVSAPK ddPTM_A549_MK2206_60min_R1 6 SDDYMPMSPASVSAPK 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SDDY(0.001)MPMS(0.999)PASVSAPK;SDDY(0.019)MPMS(0.977)PAS(0.003)VSAPK;SDDY(0.001)MPMS(0.996)PAS(0.003)VSAPK;SDDYMPMS(0.997)PAS(0.003)VSAPK;SDDYMPMS(0.975)PAS(0.025)VSAPK;SDDYMPMS(0.739)PAS(0.26)VS(0.001)APK 163.23 1.2136e-20 55152900.0 11640.099999999999 14314.899999999998 13271.7 11118.9 17751.100000000002 13353.3 13502.699999999999 12388.5 19847.100000000002 19719.6 18755.1 True False 13604.664306877994 15043.46726611853 15153.82662505726 13843.030999146391 15139.936704739986 14766.337342796833 15955.96580822018 14144.607813190065 15351.763539306066 15264.928664143012 14097.691055572834 0.9650278370584703 1.0670873128668705 1.0749154996602748 0.9819360450287513 1.0739302375870374 1.0474294893105691 1.13181412086008 1.0033279745904693 1.0889558778660777 1.0827963674313013 1.0 13.783171274411336 SDDYMPMS(ph)PASVSAPK ddPTM_A549_PD325901_60min_R1 5 SDDYMPMSPASVSAPK 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SDDYMPMS(0.998)PAS(0.002)VSAPK;SDDYMPMS(1)PASVSAPK;S(0.004)DDY(0.123)MPMS(0.871)PAS(0.002)VSAPK;SDDYMPMS(0.96)PAS(0.04)VSAPK;SDDYMPMS(0.975)PAS(0.025)VSAPK 169.37 6.4026e-28 21568600.0 11707.900000000001 12337.9 14002.800000000001 12800.199999999999 15379.5 15274.0 14346.2 15728.100000000002 14985.8 16709.800000000003 18393.7 True False 12896.477389099564 13377.658132863813 14953.11421367683 13590.83928263659 14299.296976394675 15149.613608078569 14892.152491541869 15414.39070704425 14355.99894052328 15654.7403762877 16131.391507271139 0.7994646576698945 0.8292935006154866 0.9269574919768573 0.8425087988541219 0.8864267518365878 0.9391386726464336 0.9231784179826836 0.9555524518821761 0.8899417594602667 0.9704519519739763 1.0 13.977583271487006 -2.0000002442956233 0.023528451466036812 1.557459480861279 2.421169262292376e-05 0.6654970000210113 0.03451850219220881 847.1511279815996 1.4917939328972385 34.426948701459665 70.33134962255335 0.009999994374886977 2.0000002442956233 -1.557435269168656 SDEEDEDS(ph)DFGEEQR ddPTM_A549_PD325901_60min_R1 1 SDEEDEDSDFGEEQR 15 0 Q5VW52;Q9HCL2 Q5VW52 GPAM Glycerol-3-phosphate acyltransferase 1, mitochondrial 1 S(0.013)DEEDEDS(0.987)DFGEEQR 57.136 0.010919 9633100.0 0.0 0.0 0.0 249.44 0.0 0.0 0.0 0.0 0.0 160.54 136.21 True False 0.0 0.0 0.0 264.84734228065736 0.0 0.0 0.0 0.0 0.0 150.40347700207224 119.45703350633104 0.0 0.0 0.0 2.2170929120437335 0.0 0.0 0.0 0.0 0.0 1.2590591996753466 1.0 6.900347990458627 -10.873863523178011 1.1399308882868522 0.9971398120303423 0.24265936709000668 0.21393268816252342 0.6370598704769417 0.7399759498409579 1.7177074650181807 0.43556278379570457 0.10689054928668573 1.3370156070168254e-11 10.873863523178011 -0.7544804449403356 SDEGQLS(ph)PATR ddPTM_A549_MK2206_60min_R1 3 SDEGQLSPATR 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SDEGQLS(1)PATR;SDEGQLS(1)PATR;SDEGQLS(0.844)PAT(0.156)R 225.14 1.4783e-39 492800300.0 10796.2 11991.42 10636.68 9413.96 12782.5 10597.74 9991.679999999998 10285.82 13542.600000000002 15287.5 16028.7 True False 12618.334618252096 12601.73205850401 12145.121166558472 11720.380622608722 10902.211182875359 11719.18581258953 11807.038921599198 11743.866484002647 10475.222723088322 11834.043132370132 12048.331420384868 1.047309720987823 1.0459317243865678 1.0080334564842601 0.9727803970248297 0.9048731149966244 0.9726812289344525 0.9799729530698814 0.9747297010881449 0.8694334806697827 0.9822142767709581 1.0 13.55654574026036 -6.161474790936807 1.952145576602242 0.943668897151768 1.0473013625956804 0.4589384442216662 0.0371289609409735 0.2667640873312306 1.9310192060887508 0.007198609453967115 0.026182879887692877 6.894856139003778e-07 6.161474790936807 0.10363246544391236 SDEGQLS(ph)PATR ddPTM_A549_PD325901_60min_R1 2 SDEGQLSPATR 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SDEGQLS(1)PATR;SDEGQLS(1)PATR 258.53 1.0951999999999998e-62 563290000.0 12589.8 13726.4 14338.6 13800.0 16040.9 13963.4 13570.599999999999 14260.8 15453.4 16097.2 15525.300000000001 True False 13867.907227879085 14883.171900804982 15311.70362100627 14652.39465792604 14914.242522100805 13849.686699950518 14087.036609117262 13976.357156618817 14803.947338646078 15080.820044834669 13615.786522985407 1.0185167933169386 1.0930820541053612 1.1245552062055255 1.076132813421442 1.0953640097781658 1.0171786019537141 1.0346105665902088 1.0264818072040653 1.0872634727090413 1.1075981559622776 1.0 13.732992702367172 -7.2531176857932635 24.861559279570468 1.038888495954688 1.0842623735179628 0.1733079421938527 0.03745316396134315 671.964347336877 2007537.6444197362 0.005683919129553338 0.009740881841613114 5.583188801186917e-08 7.2531176857932635 0.04537387756327482 SDENVLDS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SDENVLDSPK 10 0 Q2LD37-7;Q2LD37-4;Q2LD37;Q2LD37-2;Q2LD37-6;H7C121 Q2LD37-7 KIAA1109 Uncharacterized protein KIAA1109 1 SDENVLDS(1)PK;SDENVLDS(1)PK 100.19 0.00045788 7508000.0 6386.9 6245.4 5206.7 5806.0 8350.1 7632.4 6622.5 7465.5 9166.0 8683.0 9317.4 True False 7464.852575287072 6563.264183739791 5945.088352561138 7228.47026064124 7121.811351310584 8440.05550202292 7825.722526971513 8523.757487134884 7089.915635094261 6721.504269394599 7003.632432841966 1.065854418670277 0.9371228782599774 0.8488578476338903 1.0321030308136885 1.0168739464273489 1.2050968669408135 1.1173805310333733 1.2170480916680653 1.0123197787833196 0.959716880325645 1.0 12.773887654379987 -6.49010844049213 23.947304126709714 1.0459158792469647 0.9477990657807033 0.21882208288843386 0.09297267296196662 547.8724071335264 400363.2818188415 0.01392490159984551 0.03233046310780784 3.2351286779626215e-07 6.49010844049213 -0.09811681346626144 SDEQLSSLDRDS(ph)GQCSR ddPTM_A549_MK2206_60min_R1 2 SDEQLSSLDRDSGQCSR 17 1 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 SDEQLS(0.002)S(0.007)LDRDS(0.982)GQCS(0.009)R;SDEQLS(0.011)S(0.011)LDRDS(0.9)GQCS(0.079)R 67.563 0.0005407999999999999 6208000.0 950.79 1256.8 1052.8 1171.3899999999999 1504.9499999999998 964.27 890.25 890.9000000000001 1653.29 1646.47 1525.43 True False 1111.2601074163044 1320.7657517731716 1202.1028708349563 1458.3806025856943 1283.5738485952095 1066.3084113693778 1051.9969014173473 1017.1878032668228 1278.8224547616185 1274.531283476923 1146.623631273759 0.9691585600602266 1.1518738282987957 1.0483848736830643 1.2718912839478211 1.1194378116638983 0.9299550282116891 0.9174735917911504 0.887115680789564 1.1152939987299955 1.1115515577339656 1.0 10.163176202258088 -7.161241214260963 16.49776256106579 1.022573679467934 1.1197116707912373 0.23590001849570053 0.09860094839850611 3.839459933205989 627.0001514549251 0.01529869454221729 0.026498740336015944 6.898565398052333e-08 7.161241214260963 0.09713799132330325 SDEQLSSLDRDS(ph)GQCSR ddPTM_A549_PD325901_60min_R1 2 SDEQLSSLDRDSGQCSR 17 1 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 SDEQLS(0.001)S(0.006)LDRDS(0.98)GQCS(0.013)R;SDEQLS(0.001)S(0.006)LDRDS(0.991)GQCS(0.001)R 87.32600000000001 2.2005e-06 8561100.0 1062.3999999999999 1410.3 1523.6999999999998 1688.47 1529.38 1312.0 1842.17 1438.0 1199.6399999999999 1409.12 1622.99 True False 1170.2540659024562 1529.1509304482806 1627.107444752434 1792.7629571064044 1421.9616248745726 1301.3155069922136 1912.2747874241038 1409.3179619108225 1149.2233026604754 1320.1479227180769 1423.37251898128 0.8221699170783605 1.074315339137436 1.1431353514658051 1.2595177532228177 0.9990087667930267 0.9142480198532822 1.3434815987544393 0.9901258757752914 0.8073946119761989 0.9274788610243213 1.0 10.475097571933146 -8.520187583865024 24.978100805953144 0.9085060145186161 1.085409389684917 0.2108476214782573 0.14314051839613134 118.71755929427002 1101886.2682851248 0.024788687885067943 0.0283575220083375 3.0186476009282312e-09 8.520187583865024 0.17690337516630095 SDES(ph)DEDTF ddPTM_A549_MK2206_60min_R1 1 SDESDEDTF 9 0 Q9BS91 Q9BS91 SLC35A5 Probable UDP-sugar transporter protein SLC35A5 1 S(0.078)DES(0.922)DEDTF 57.598 0.017488999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SDES(ph)DEDTF ddPTM_A549_PD325901_60min_R1 2 SDESDEDTF 9 0 Q9BS91 Q9BS91 SLC35A5 Probable UDP-sugar transporter protein SLC35A5 1 S(0.011)DES(0.988)DEDT(0.001)F;S(0.008)DES(0.992)DEDTF 57.598 0.013149000000000001 2037000.0 0.0 0.0 129.21 0.0 172.27 0.0 274.9 0.0 147.78 114.59 0.0 True False 0.0 0.0 137.9789676028496 0.0 160.17034949923675 0.0 285.36146993105194 0.0 141.56932051879312 107.35476784394827 0.0 0.0 SDES(ph)GEEKNGDEDCQR ddPTM_A549_MK2206_60min_R1 6 SDESGEEKNGDEDCQR 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 S(0.163)DES(0.837)GEEKNGDEDCQR;S(0.012)DES(0.988)GEEKNGDEDCQR;S(0.009)DES(0.991)GEEKNGDEDCQR;S(0.081)DES(0.919)GEEKNGDEDCQR;SDES(1)GEEKNGDEDCQR;S(0.025)DES(0.975)GEEKNGDEDCQR 109.5 1.5301e-07 65515400.0 4596.69 6088.930000000001 4900.089999999999 4600.599999999999 5667.93 4438.24 3033.05 3476.89 5461.15 6553.36 6580.49 True False 5372.49889371938 6398.830529077192 5594.996444101122 5727.747206528778 4834.18500526147 4907.891610934722 3584.1159245648846 3969.749805029055 4224.208244664526 5072.951424493811 4946.372720715241 1.0861492243032025 1.293640995204245 1.1311311864286868 1.1579691887231158 0.9773191949357289 0.9922203376184409 0.7245947943944315 0.8025577588206967 0.8540012011172725 1.0255902073955048 1.0 12.272155238920405 -6.863393701876538 1.8479913703181206 0.9048370394357713 1.1841669508291646 0.6317700333594506 0.09559492124665604 0.17756519155715436 1.227699033430258 0.015240177827733471 0.034223461616419634 1.3696395810023196e-07 6.863393701876538 0.27932991139339325 SDES(ph)GEEKNGDEDCQR ddPTM_A549_PD325901_60min_R1 6 SDESGEEKNGDEDCQR 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 S(0.012)DES(0.988)GEEKNGDEDCQR;S(0.177)DES(0.823)GEEKNGDEDCQR;S(0.007)DES(0.993)GEEKNGDEDCQR;S(0.024)DES(0.976)GEEKNGDEDCQR;S(0.003)DES(0.997)GEEKNGDEDCQR;S(0.017)DES(0.983)GEEKNGDEDCQR 106.49 2.2268e-07 92263500.0 4458.83 4266.8 4850.7 4199.06 4645.090000000001 4123.65 4634.77 4660.98 3538.1199999999994 4490.11 5246.4400000000005 True False 4911.487139182842 4626.378210335904 5179.897671628688 4458.426399442822 4318.8349030905565 4090.0683615917974 4811.148708593458 4568.013097431923 3389.42512054373 4206.603688313034 4601.161139923323 1.067445149131354 1.0054805884092557 1.1257805397606677 0.9689785390817937 0.9386402196647536 0.8889209130502126 1.0456379514397172 0.9927957223223977 0.7366456025924389 0.9142482865494981 1.0 12.167782267444776 -6.851019403655388 0.7278897046359487 0.8884523611560786 1.0712135426551177 0.2643935415767399 0.08469425685276119 0.8284332890159481 0.7819081102984592 0.02044282220633518 0.08024196082368237 1.409225834823533e-07 6.851019403655388 0.18276118149903908 SDES(ph)PKPGK ddPTM_A549_MK2206_60min_R1 4 SDESPKPGK 9 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.247)DES(0.753)PKPGK;SDES(1)PKPGK;S(0.033)DES(0.967)PKPGK;SDES(1)PKPGK 82.26100000000001 0.00054036 377173300.0 39327.2 37005.600000000006 28185.0 20129.82 19349.6 12924.6 11390.91 12743.36 17929.2 53410.6 56094.200000000004 True False 45964.66990227337 38889.026976302746 32182.05681466873 25061.626803661962 16503.29947226012 14292.272593344864 13460.490900672712 14549.770304903248 13868.264827049104 41345.10836472732 42164.46201883828 1.0901282193933182 0.9223176370405928 0.7632507394566163 0.5943779572585297 0.39140306035179007 0.3389648986143674 0.3192378191534572 0.34507188300902986 0.32890885269336595 0.9805676720422783 1.0 15.363739926596343 -5.79959600807069 1.7757660363660333 0.5768329879152798 1.0753025032683614 0.37055140150768573 0.23730814424386978 0.46372481906475005 2.60092396141416 0.04318339096717665 0.2733601485107179 1.5863681869222494e-06 5.79959600807069 0.4984695153530816 SDES(ph)PKPGK ddPTM_A549_PD325901_60min_R1 6 SDESPKPGK 9 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.007)DES(0.993)PKPGK;S(0.092)DES(0.908)PKPGK;S(0.003)DES(0.997)PKPGK;SDES(1)PKPGK;SDES(1)PKPGK;S(0.001)DES(0.999)PKPGK 109.42 0.0003139 774055000.0 53884.1 51514.9 44452.50000000001 43722.200000000004 49267.09999999999 38455.3 34396.42 39617.4 41479.67999999999 48709.2 59973.299999999996 True False 59354.374164622175 55856.24141455727 47469.31396459771 46422.82099367929 45806.74885826809 38142.1327866141 35705.394585543254 38827.19987775094 39736.43329907276 45633.69279923595 52596.964302072156 1.1284752827889688 1.0619670194988176 0.902510526880875 0.8826140749695393 0.8709010009625868 0.7251774563938364 0.6788489613294388 0.7382022972801355 0.7554891014405422 0.8676107719288683 1.0 15.682691914566451 -5.713376300833304 1.5457682545267322 0.8433783361266594 1.1518835571082442 0.585348318443906 0.08889185578316919 0.4258653306569166 1.607287661529868 0.017700840797532424 0.15379872030897115 1.9347448493765674e-06 5.713376300833304 0.30850522098158484 SDES(ph)STEETDK ddPTM_A549_PD325901_60min_R1 2 SDESSTEETDK 11 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y815 A0A0C4DG98 THOC2 THO complex subunit 2 1 SDES(0.787)S(0.02)T(0.192)EETDK;S(0.04)DES(0.917)S(0.04)T(0.002)EETDK 90.697 3.246e-05 2571800.0 1325.7 1124.7 1348.0 1493.9 1865.1 1110.0 1402.0 1441.4 1586.0 1405.3 1455.3 True False 1460.2840880712408 1219.4824161349927 1439.4833861825034 1586.1748101069363 1734.1018102456985 1100.9605280193275 1455.3538772038378 1412.6501462435758 1519.3459354635681 1316.5691181700022 1276.3073259067885 1.1441476973688456 0.9554770950394547 1.1278501321457055 1.2427843810894008 1.3586867167855963 0.8626139689648173 1.1402848261251188 1.106826010921718 1.1904232661080325 1.0315455309594879 1.0 10.317760046504887 -7.252475922696149 24.996266292298348 1.0834146660035395 1.1562749587490124 0.14678032817445463 0.12186570530952358 1566.3937302054628 4368181.567453476 0.01934629895748458 0.03321180836658904 5.5914452570667205e-08 7.252475922696149 0.0728602927454729 SDES(ph)STEETDKSR ddPTM_A549_MK2206_60min_R1 3 SDESSTEETDKSR 13 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y815 A0A0C4DG98 THOC2 THO complex subunit 2 1 S(0.01)DES(0.935)S(0.045)T(0.01)EETDKSR;S(0.003)DES(0.921)S(0.039)T(0.036)EETDKSR;S(0.003)DES(0.965)S(0.016)T(0.016)EET(0.001)DKSR 77.74600000000001 0.00024876 23766500.0 3184.24 3630.35 3236.0299999999997 2692.7599999999998 4024.4700000000003 2069.224 1630.75 1844.76 3117.8 5367.4800000000005 4913.61 True False 3721.661864806415 3815.1193085214327 3694.947713818427 3352.4863208825896 3432.4757941831704 2288.187910240273 1927.0361662300916 2106.2603793405588 2411.6232781035233 4154.962540123245 3693.425028262885 1.0076451630471597 1.0329488968443428 1.0004122692470783 0.9076903674038707 0.9293476293459662 0.6195300818970375 0.5217477413197764 0.5702729480693395 0.6529503806491973 1.1249619278389504 1.0 11.850743577772615 -7.063609632363686 6.397012342801282 0.770184909214925 0.9831750962394441 0.3013536709871554 0.1721469204710257 0.2757846960016728 22.263533051197008 0.027791338345589264 0.04871700452645903 8.637545888125918e-08 7.063609632363686 0.2129901870245191 SDES(ph)STEETDKSR ddPTM_A549_PD325901_60min_R1 3 SDESSTEETDKSR 13 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y815 A0A0C4DG98 THOC2 THO complex subunit 2 1 SDES(0.337)S(0.19)T(0.19)EET(0.25)DKS(0.033)R;S(0.001)DES(0.95)S(0.047)T(0.002)EETDKSR;SDES(0.786)S(0.201)T(0.013)EETDKSR 159.4 4.589699999999999e-19 38720400.0 6501.360000000001 6820.06 6580.139999999999 7111.18 7056.89 7609.58 7517.289999999999 7407.299999999999 6606.82 7784.36 8645.19 True False 7161.373281151733 7394.810391202655 7026.707869996245 7550.421437938439 6561.238391348869 7547.6101034282065 7803.36458456893 7259.555590585565 6329.158331235438 7292.854181112813 7581.886436374704 0.9445371335020891 0.9753259236020027 0.9267756684253479 0.9958499776143693 0.8653833642074623 0.9954791814366865 1.029211483191263 0.9574867220059204 0.8347735598980744 0.9618785828978873 1.0 12.888341132240805 -8.558396101158898 24.999066628605128 0.9206160786802173 0.9622572757180763 0.04184883156839525 0.0549517656075923 377.28857366041626 265554.85909431 0.01171041922417238 0.013278393789119707 2.764419188442806e-09 8.558396101158898 0.04164119703785896 SDGACDS(ph)PSSDKENSSQIAQDHQK ddPTM_A549_MK2206_60min_R1 1 SDGACDSPSSDKENSSQIAQDHQK 24 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.031)DGACDS(0.747)PS(0.109)S(0.109)DKENS(0.002)S(0.002)QIAQDHQK 79.875 8.092e-06 8460200.0 1130.8 1217.4 1417.0 1346.2 1393.2 1167.3 1056.5 1097.0 1688.0 1767.1 1884.9 True False 1321.6513945943452 1279.360460064179 1617.951907269312 1676.0190604332142 1188.2621255608803 1290.8229112089714 1248.4523744424916 1252.503109421602 1305.6706951820993 1367.9108826957493 1416.8273094064664 0.9328246186530721 0.9029755790069612 1.1419542074941371 1.182938138830291 0.8386781632961776 0.9110658036015127 0.8811605805124479 0.8840195986526385 0.9215454039554527 0.9654746726111533 1.0 10.468448210140643 -6.778625954307891 24.999965059753553 0.9386314703319198 1.037643465492413 0.30317869297348765 0.08682702220577523 299.34260402583493 435429.81478479644 0.013682831345127145 0.02590131190323051 1.6648459182963727e-07 6.778625954307891 0.09901199516049308 SDGACDSPS(ph)SDKENSSQIAQDHQK ddPTM_A549_MK2206_60min_R1 1 SDGACDSPSSDKENSSQIAQDHQK 24 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.001)DGACDS(0.075)PS(0.457)S(0.457)DKENS(0.005)S(0.005)QIAQDHQK 65.155 0.0001268 6018100.0 1234.0 1437.1 1322.7 1122.3 1476.5 1076.2 1183.5 1210.8 1572.1 2034.0 1746.1 True False 1442.2690315965874 1510.242251649607 1510.278749290839 1397.2635503819608 1259.3088059077234 1190.082769676257 1398.5266305278637 1382.4346079194845 1216.021860127831 1574.517987325649 1312.4951800915862 1.0988756785346407 1.1506649887614993 1.1506927965902711 1.0645856621617913 0.9594768994274314 0.9067330590830914 1.0655480124736718 1.0532873787948067 0.9264962481942041 1.1996371576890505 1.0 10.358096409406002 -6.557637258987171 3.3763800258290204 0.974304617396908 1.1336563825930548 0.18286933527220905 0.08263742293008304 0.11168267405266247 2.6429464669899816 0.007499027052345985 0.01716792518939335 2.769253676838739e-07 6.557637258987171 0.1593517651961468 SDGAPAS(ph)DSKPGS(ph)SEAAPSSK ddPTM_A549_MK2206_60min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 2 S(0.002)DGAPAS(0.738)DS(0.26)KPGS(0.531)S(0.467)EAAPS(0.001)S(0.001)K 84.948 1.3702999999999999e-05 19153000.0 1957.2 2741.1 2825.7 2445.5 3518.7 2494.9 2252.4 2522.5 3425.5 3310.5 3483.5 True False 2287.5275110541656 2880.610281815278 3226.42674973246 3044.6476097826667 3001.103891193705 2758.908662019413 2661.6319244621563 2880.0720998322604 2649.629719399454 2562.655750757896 2618.450810290958 0.8736186687425224 1.1001200673673106 1.232189177299819 1.1627667771403924 1.1461372042578974 1.053641585007605 1.0164910923670931 1.0999145328654203 1.0119073877523144 0.9786915762122481 1.0 11.354497787514706 -8.267345361905862 0.8841152106620576 1.0037512294509918 1.1071290611398108 0.15961133968845087 0.08740919855410012 0.6545518817626463 1.01288261633549 0.018464816347809457 0.024647714732054713 5.4032447243050354e-09 8.267345361905862 0.10337783168881898 SDGAPASDS(ph)KPGS(ph)SEAAPSSK ddPTM_A549_PD325901_60min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 2 S(0.003)DGAPAS(0.289)DS(0.708)KPGS(0.836)S(0.164)EAAPSSK 149.16 1.9084000000000002e-22 17548000.0 4408.1 4171.4 4700.1 3906.3 4953.1 5487.5 5272.0 4535.0 5457.7 5807.9 5844.5 True False 4855.607066928292 4522.93851752957 5019.077049997317 4147.583279149023 4605.21134326737 5442.811619374828 5472.628844949093 4444.545867361322 5228.331848662998 5441.188202817586 5125.6635513380215 0.9473128734055841 0.8824103400912622 0.9792053262425153 0.8091797749905616 0.8984614961833007 1.0618745387519666 1.0676917808076767 0.8671161934148217 1.0200302451178591 1.0615578155529148 1.0 12.323523067866997 -7.241175571955643 24.009475076051427 1.0059458309253235 0.9011391417494874 0.41106408645920156 0.06507441608612954 377.26519086218224 447000.5004816303 0.0088533398505255 0.015319965923508885 5.738844114167745e-08 7.241175571955643 -0.10480668917583613 SDGAPASDS(ph)KPGSS(ph)EAAPSSK ddPTM_A549_MK2206_60min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 2 S(0.027)DGAPAS(0.155)DS(0.818)KPGS(0.447)S(0.524)EAAPS(0.023)S(0.006)K 95.652 3.6448e-07 16287000.0 1990.8 2225.1 2325.3 1980.4 2763.8 2002.4 2115.4 1976.6 3203.5 3136.0 3158.0 True False 2326.798369613035 2338.3480858294765 2655.062505274053 2465.5980889035354 2357.2486811837216 2214.292638914456 2499.740797818879 2256.789103083627 2477.9123649383027 2427.5754219534087 2373.7814436339454 0.9802074979788428 0.9850730327766717 1.1184949281638596 1.0386794856433923 0.9930352634213391 0.9328123466685572 1.0530627427907207 0.9507147800552277 1.043867105619019 1.0226617233291333 1.0 11.212971395420983 -5.561116494074644 24.999993256554294 1.018094813611462 0.9814223857144004 0.07140124077962062 0.04784613871258667 275.7362978428164 180276.8618619683 0.006410674644203448 0.024828550317248343 2.747157163638912e-06 5.561116494074644 -0.0366724278970616 SDGAPASDS(ph)KPGSS(ph)EAAPSSK ddPTM_A549_PD325901_60min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 2 SDGAPAS(0.127)DS(0.873)KPGS(0.178)S(0.82)EAAPS(0.001)S(0.001)K 131.62 4.6975999999999996e-18 20860000.0 4731.4 4901.8 4017.4 3711.5 5441.4 4769.1 5081.6 5332.2 4865.8 4607.7 5173.0 True False 5211.7282449274135 5314.891888868594 4290.044922588718 3940.750925571919 5059.214835810922 4730.262030790068 5274.983068758217 5225.845087970024 4661.307347275299 4316.769035644999 4536.753794348802 1.1487791670377598 1.1715186959206554 0.9456199558222893 0.8686279009631749 1.1151618679666773 1.0426534577834725 1.162721917007925 1.1518908287418168 1.027454333775319 0.9515105362389675 1.0 12.14744465268003 -8.978857938520768 21.920256666405198 1.0121119301299726 1.0720803239963375 0.12938462413534302 0.09258048992778728 76.6043183882965 79426.99774443002 0.01698280971794237 0.01741213061126356 1.0498857992100422e-09 8.978857938520768 0.05996839386636488 SDGAPASDSKPGS(ph)SEAAPSSK ddPTM_A549_MK2206_60min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 SDGAPASDSKPGS(0.712)S(0.288)EAAPSSK 187.51 4.214e-45 23435000.0 7096.4 6706.7 6464.4 6355.7 10477.0 8168.1 8337.2 8573.9 12561.0 9434.4 9716.6 True False 8294.09882967749 7048.042383368179 7381.149124454306 7912.846785318217 8935.847178797976 9032.44292045403 9851.961321535206 9789.276581467519 9715.95355579523 7303.162487524633 7303.700055482458 1.135602333977502 0.9649961430272083 1.0106040867482928 1.083402484385775 1.2234685311440687 1.2366941210399114 1.3489000433608878 1.3403174428171218 1.3302782811435465 0.9999263978594766 1.0 12.834411803358618 -6.61747575412644 4.061884118399486 1.1983224948157127 1.0317599858681126 0.3004829598875741 0.11947496204074891 0.27540143989378013 8.49249266329738 0.02127513418364035 0.046075784690326055 2.4128162319874443e-07 6.61747575412644 -0.16656250894760016 SDGAPASDSKPGS(ph)SEAAPSSK ddPTM_A549_PD325901_60min_R1 2 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 SDGAPASDSKPGS(0.949)S(0.05)EAAPSSK;SDGAPASDSKPGS(0.973)S(0.026)EAAPSSK 208.96 1.3924e-67 89898000.0 13061.800000000001 12935.5 13733.6 12756.1 15457.099999999999 14349.5 13590.400000000001 14203.3 15672.300000000001 15814.5 15961.0 True False 14387.824320411068 14025.619982141203 14665.644682845714 13544.015325794953 14371.44662010014 14232.642429561567 14107.590108952243 13920.004039226702 15013.647732891337 14815.96977108055 13997.898185115273 1.0278560488252746 1.0019804256795786 1.0477033400943359 0.9675749277985921 1.0266860374353974 1.016769963700401 1.007836313879866 0.9944352970097039 1.0725644331987045 1.0584424586567702 1.0 13.772922599180317 SDGAPASDSKPGSSEAAPSSK ddPTM_A549_MK2206_60min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 149.71 5.8718e-22 10274000.0 2111.1 2466.8 2313.5 2003.9 3178.0 2193.2 2076.1 2204.4 2714.2 3076.9 3612.2 False True 2467.4020685604173 2592.3495834453042 2641.5890878387836 2494.8555899584885 2710.5204098711447 2425.2829682716656 2453.3004965263185 2516.8804506918664 2099.4380336867616 2381.8261530001428 2715.191048351658 0.9087397625512692 0.9547577084931358 0.9728925297696613 0.9188508453108921 0.9982798122130858 0.8932273733533446 0.9035461788280686 0.9269625620708413 0.7732192675580937 0.8772223061232118 1.0 11.406837998276412 -7.308724460149143 22.119570359537473 0.8941596244956889 0.9503924060164956 0.20059331591049223 0.05463013451784026 207.08578409088102 96872.418197034 0.012269333793614914 0.019613998451594776 4.912194334191597e-08 7.308724460149143 0.056232781520806685 SDGAPASDSKPGSSEAAPSSK ddPTM_A549_PD325901_60min_R1 2 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 0 ; 173.8 3.3641999999999994e-35 39699000.0 5706.4 5324.6 5692.5 4059.2 6618.1 6676.9 5886.6 6429.0 5959.2 6283.2 6260.200000000001 False True 6285.70952717035 5773.322728685326 6078.827281783306 4309.927564887927 6153.267487205541 6622.525540119136 6110.617784271121 6300.768551547069 5708.755547676224 5886.477679702382 5490.235086677435 1.1448889579288157 1.0515620255851756 1.107207102394239 0.7850169431444504 1.1207657577609047 1.206237152975345 1.11299747420636 1.1476318321662526 1.0398016583167902 1.0721722452261593 1.0 12.422652210053288 -9.072938592704253 3.5130336035865977 1.0156873343066424 1.0809058217686638 0.028494187653230085 0.10437381409520272 0.46602203951578597 12.00775608310673 0.019603260458044412 0.019397315264754505 8.453983722554482e-10 9.072938592704253 0.06521848746202141 SDGEAKPEPS(ph)PSPR ddPTM_A549_MK2206_60min_R1 1 SDGEAKPEPSPSPR 14 1 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SDGEAKPEPS(0.5)PS(0.5)PR 69.52199999999999 0.00077492 111470000.0 2274.1 2308.6 2713.1 2184.2 3158.8 2644.9 2829.0 2456.5 3094.1 3380.9 3712.6 True False 2657.912483593031 2426.0978791721377 3097.858376578951 2719.3290980524635 2694.1447044370584 2924.7815624574714 3342.992680830863 2804.7163977157393 2393.2912902623993 2617.152341862973 2790.6589574526224 0.9524318535931867 0.8693638012244733 1.11008131907553 0.974439779103187 0.9654152461884256 1.0480612669085438 1.197922330101713 1.0050373193132667 0.8576079437693277 0.9378259335035227 1.0 11.446390110085353 -8.553618885829318 23.554122382070148 0.9326836367537371 1.0186952820230402 0.1557761312002972 0.08687422680661529 153.95879611113625 117967.40276676256 0.016284159724087706 0.018464651311499013 2.794995507534215e-09 8.553618885829318 0.08601164526930305 SDGEAKPEPSPS(ph)PR ddPTM_A549_MK2206_60min_R1 3 SDGEAKPEPSPSPR 14 1 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SDGEAKPEPS(0.006)PS(0.994)PR;SDGEAKPEPS(0.141)PS(0.859)PR;SDGEAKPEPS(0.267)PS(0.733)PR 136.81 2.9793000000000002e-09 94971600.0 3749.14 4842.7 4157.9400000000005 3999.96 5010.6 4631.2 4653.43 5377.6 6274.9 6298.5 6222.9 True False 4381.903174327415 5089.172745155903 4747.598414475205 4979.950379565029 4273.547377501683 5121.27051005824 5498.897996026429 6139.891268209306 4853.645168956252 4875.66447550177 4677.5821866971755 0.9367880668755202 1.0879921596309459 1.0149684655412687 1.0646419839992922 0.9136231512201861 1.0948542015195144 1.1755855432460465 1.3126207136821388 1.0376397410525018 1.0423471530586743 1.0 12.191547286989456 -5.248486038448988 22.75513485365606 1.050729186704916 0.9367878132151091 0.09497517450862036 0.10027114836125316 1209.2743624590519 2124192.6044777385 0.01451755890404159 0.3333674567373063 5.643050821409958e-06 5.248486038448988 -0.11394137348980693 SDGEAKPEPSPS(ph)PR ddPTM_A549_PD325901_60min_R1 3 SDGEAKPEPSPSPR 14 1 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SDGEAKPEPS(0.013)PS(0.987)PR;SDGEAKPEPS(0.033)PS(0.967)PR;SDGEAKPEPS(0.285)PS(0.715)PR 131.24 7.416e-09 312820800.0 16620.6 14742.5 14339.800000000001 15094.6 16149.2 16295.1 16472.4 16491.8 16997.300000000003 17618.8 17840.7 True False 18307.911076560955 15984.902213808258 15312.985060222441 16026.959159676126 15014.935903715532 16162.39810822319 17099.266196043158 16162.858111433186 16282.962590702955 16506.345961156778 15646.407001515303 1.1701032112220968 1.021634053892384 0.9786901912202226 1.0243220157908437 0.9596411433156113 1.032978249041963 1.0928557715766405 1.03300764896809 1.0406838189193215 1.0549607944851616 1.0 13.93354377816266 SDGHVYHT(ph)VHK ddPTM_A549_MK2206_60min_R1 2 SDGHVYHTVHK 11 0 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 SDGHVYHT(1)VHK;SDGHVYHT(1)VHK 87.49799999999999 0.00014827 7593300.0 1122.08 1230.5 1138.54 973.24 1299.47 1034.93 960.11 841.49 1465.35 1699.58 1554.82 True False 1311.4596717778757 1293.127194109555 1300.0020920976738 1211.6838436904045 1108.3196843974995 1144.4456056690656 1134.5495591348606 960.7737844550438 1133.4505646831085 1315.6436975904257 1168.7152831510227 1.1221378642726343 1.1064518559414231 1.1123342963332208 1.036765635872864 0.9483230863630977 0.9792338837081666 0.9707664265978909 0.822076855078562 0.96982608255722 1.1257178857482406 1.0 10.190707794843323 -6.471894492225397 2.7701444973412523 0.9690629553679447 1.1136915499629076 0.4608763746633674 0.06609745645915399 0.13907536074253532 2.10175881162823 0.007262263033379592 0.018170573137905443 3.373692594039664e-07 6.471894492225397 0.1446285945949629 SDGIYIINLK ddPTM_A549_PD325901_60min_R1 1 SDGIYIINLK 10 0 F8WD59;C9J9K3;A0A0C4DG17;P08865 F8WD59 RPSA 40S ribosomal protein SA 0 156.94 3.9091e-08 2491600.0 2466.2 3375.3 2747.5 2850.2 3393.9 3236.2 3030.7 3124.9 3317.6 3686.0 3602.1 False True 2716.566808479518 3659.748376616382 2933.961872059664 3026.2503807261464 3155.5241723193813 3209.845460158692 3146.0349469626744 3062.5714180633736 3178.1728092647713 3453.2653309433063 3159.064535593239 0.8599276076420438 1.158491172111848 0.9287438857303044 0.957957758263349 0.9988793001111664 1.0160746714710331 0.9958754914678825 0.9694551610317942 1.0060487126667528 1.0931290868025334 1.0 11.62528169443738 -6.96427095462874 24.933181905580266 1.0006675678336603 0.984964586225061 0.03307316009172767 0.07351496444895228 886.6316331353378 618724.6467590765 0.008747701218579821 0.016531521199138862 1.0857480183191141e-07 6.96427095462874 -0.015702981608599287 SDGLRS(ph)PSEVVYLR ddPTM_A549_PD325901_60min_R1 1 SDGLRSPSEVVYLR 14 1 Q9NRU3 Q9NRU3 CNNM1 Metal transporter CNNM1 1 S(0.01)DGLRS(0.982)PS(0.008)EVVYLR 76.76100000000001 0.00021358 3546900.0 1594.6 1507.4 1839.7 1521.7 1898.6 1752.3 1597.6 1252.5 1666.5 1767.9 2007.9 True False 1756.4826181175233 1634.4338882207596 1964.5531050148015 1615.6919529685545 1765.248885814425 1738.0298497732142 1658.3975422402643 1227.5179049327587 1596.462800409858 1656.274492288299 1760.9410291268061 0.997468165636703 0.9281593541103547 1.1156268566182252 0.9175162178881845 1.0024463378479829 0.9869892409940878 0.941767790521986 0.6970806430363232 0.9065964015850617 0.9405621567631893 1.0 10.782130881275366 -7.782132520007976 5.650411967344007 0.9300964757684295 0.9914819517668745 0.18158966383949904 0.08788920242936929 0.3570410718122906 34.04658325072799 0.014863155629158836 0.021097228742264926 1.6514577978259907e-08 7.782132520007976 0.061385475998445016 SDGPAS(ph)PVEGPKDPSCPK ddPTM_A549_MK2206_60min_R1 1 SDGPASPVEGPKDPSCPK 18 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 SDGPAS(1)PVEGPKDPSCPK 133.38 3.2445e-13 9816200.0 5317.2 5604.1 4996.4 5025.1 7238.3 5446.1 5312.8 5266.8 8277.7 6793.3 8276.4 True False 6214.613366941149 5889.3247529535565 5704.9646503037375 6256.249725585309 6173.55565851803 6022.4026871714 6278.066990002901 6013.385028898536 6402.8141667706495 5258.6888118482475 6221.141462980362 0.9989506594444028 0.9466630501811734 0.9170286006598314 1.0056433795652875 0.9923509528363088 0.968054290841708 1.0091503347675472 0.9666047725617388 1.029202471101381 0.8452932380883311 1.0 12.602963596833876 -7.419255363375368 0.661041120547021 1.012160539650942 0.9594246571804136 0.0 0.057077777779875355 0.6270553777974818 0.537345480221922 0.005729686207863806 0.014486768895164148 3.808418241132301e-08 7.419255363375368 -0.05273588247052852 SDGPAS(ph)PVEGPKDPSCPK ddPTM_A549_PD325901_60min_R1 1 SDGPASPVEGPKDPSCPK 18 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 S(0.208)DGPAS(0.792)PVEGPKDPSCPK 117.64 1.2312e-10 10093000.0 4424.3 3728.8 4086.8 4428.4 4862.1 4283.7 4058.8 5317.7 4001.9 5173.8 4344.5 True False 4873.451679002486 4043.039062224736 4364.154823924815 4701.93221037389 4520.602869334414 4248.8149674562055 4213.259855060583 5211.634301845054 3833.7140599821273 4847.125385033771 3810.1540420545866 1.2790694615524068 1.061122205978992 1.1454011506504576 1.2340530483745011 1.1864619696312135 1.1151294463583092 1.1057977731495143 1.3678277162344685 1.006183481735252 1.2721599524674356 1.0 11.89563361078377 -8.932234267110076 24.999973689677276 1.0027266398425545 1.17833069017737 0.0 0.11517096839343403 29.440629916970348 10860.88775138307 0.0132159639952732 0.014069405129094202 1.1688687098267844e-09 8.932234267110076 0.17560405033481552 SDGS(ph)ENLCTPQQSR ddPTM_A549_MK2206_60min_R1 2 SDGSENLCTPQQSR 14 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 S(0.013)DGS(0.987)ENLCTPQQSR;S(0.024)DGS(0.976)ENLCTPQQSR 142.1 6.0628e-13 9193200.0 1239.0500000000002 1783.8200000000002 1448.79 1625.05 2062.55 1517.03 1529.91 1560.91 2561.6 2170.9 2069.43 True False 1448.1713481359411 1874.6088186887496 1654.25020729196 2023.1873229512662 1759.1516272434637 1677.5611076769856 1807.8748435241962 1782.1737725863932 1981.4016900346357 1680.4921822444699 1555.5334176375538 0.9309805444972905 1.2051228198850188 1.0634616965055825 1.3006389319645448 1.130899283356543 1.0784474885951083 1.1622217967325206 1.1456994445629116 1.273776357080045 1.0803317776333572 1.0 10.603193673389804 -5.250248286994454 24.101555783732003 1.1417002718933669 0.9309803428248334 0.33657275546658494 0.08594345543386472 1122.094313375813 2416508.047779313 0.014430618918699888 0.2959841239326944 5.620199254493543e-06 5.250248286994454 -0.21071992906853343 SDGS(ph)ENLCTPQQSR ddPTM_A549_PD325901_60min_R1 2 SDGSENLCTPQQSR 14 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 SDGS(1)ENLCTPQQSR;S(0.004)DGS(0.996)ENLCTPQQSR 166.9 2.8321e-20 11718000.0 2323.3 2553.1 2451.8999999999996 2176.7200000000003 2165.01 2287.3 2987.4 2604.4 2167.1 2332.8 2819.2 True False 2559.1597056769383 2768.2586971052283 2618.300678472464 2311.1710507102 2012.947166479031 2268.6729871518987 3101.087141768004 2552.453198887725 2076.024323293251 2185.5066098818616 2472.4562723812383 1.0350677317387682 1.1196390925203707 1.0589876584352136 0.9347672096478763 0.8141487430798316 0.9175786089704735 1.2542535843440126 1.0323552442160853 0.8396606833793744 0.8839414610867865 1.0 11.271729290509326 -6.209037563393543 5.201947643396289 0.9462615962075416 1.0785661037257515 0.15333523376629254 0.1138459771041473 0.28871700163216546 17.614355367555294 0.01738827890666077 0.04675005703619198 6.179629484131625e-07 6.209037563393543 0.13230450751820988 SDGS(ph)LEDGDDVHR ddPTM_A549_MK2206_60min_R1 4 SDGSLEDGDDVHR 13 0 Q9NRX5 Q9NRX5 SERINC1 Serine incorporator 1 1 S(0.018)DGS(0.982)LEDGDDVHR;S(0.12)DGS(0.88)LEDGDDVHR;S(0.013)DGS(0.987)LEDGDDVHR;S(0.003)DGS(0.997)LEDGDDVHR 135.58 2.1061999999999997e-08 139253000.0 1761.69 2070.89 1472.15 983.5799999999999 1611.61 1444.07 1169.84 1354.2 2105.38 1948.32 2195.1800000000003 True False 2059.0202028147437 2176.2894555136418 1680.923006553648 1224.5571441545837 1374.544303886857 1596.880528903914 1382.3847853457687 1546.1619970635672 1628.5147916010003 1508.1931588329937 1650.056222114112 1.2478485128080377 1.3189183655362364 1.018706504678967 0.7421305575792058 0.8330287692414147 0.9677734052346002 0.8377804142786159 0.9370359484373013 0.9869450324028887 0.91402531539237 1.0 10.688299466698847 -5.8377865769409105 4.911100286150722 0.9497109439931363 1.2833893875067766 0.7314213705084953 0.08461838885834345 0.08633962824081831 3.729096630536914 0.01315686032742647 0.044093892060944946 1.452825396552681e-06 5.8377865769409105 0.3336784435136403 SDGS(ph)LEDGDDVHR ddPTM_A549_PD325901_60min_R1 3 SDGSLEDGDDVHR 13 0 Q9NRX5 Q9NRX5 SERINC1 Serine incorporator 1 1 S(0.012)DGS(0.988)LEDGDDVHR;S(0.016)DGS(0.984)LEDGDDVHR;S(0.027)DGS(0.973)LEDGDDVHR 114.31 6.2053e-06 210946000.0 697.23 1046.8899999999999 838.0400000000001 782.381 959.12 802.74 733.74 656.55 1019.4599999999999 792.64 956.1700000000001 True False 768.0122763264019 1135.1150943607743 894.9144339439055 830.7068974538281 891.754719984373 796.2027515875985 761.6628772179339 643.4545951964892 976.6156414676467 742.5925751272114 838.5671516610272 0.9158625815537005 1.3536364882792598 1.0671947168110103 0.9906265655748265 1.0634267252395855 0.9494800148210986 0.9082908574575549 0.7673262587521338 1.1646242516573349 0.8855493250078897 1.0 9.711782507838937 SDGSDTTEQESTNLPS(ph)PNK ddPTM_A549_MK2206_60min_R1 2 SDGSDTTEQESTNLPSPNK 19 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 SDGSDTTEQESTNLPS(1)PNK;SDGSDTTEQESTNLPS(1)PNK 244.97 1.6602999999999996e-85 24637000.0 3515.0 3780.3999999999996 3000.2 2820.2 4211.8 3176.5 3984.5 3130.5 4647.200000000001 5185.7 4667.0 True False 4108.246066500816 3972.8062126060595 3425.6734736692974 3511.1491266035873 3592.2497993377237 3512.635121609953 4708.432073796601 3574.2579617541714 3594.6166200534676 4014.2467683749333 3508.055097352636 1.1710893792976955 1.1324811333790479 0.9765164396233377 1.0008819785223118 1.024000393280204 1.001305573638445 1.3421773441784972 1.0188716717851711 1.0246750750198181 1.1442941051308733 1.0 11.77645569152489 -8.482511810571467 24.998702909445168 1.0121846653752624 1.0871996619855298 0.00252358240591688 0.10571503522353418 875.0615982669252 541914.8091206204 0.01613210841863802 0.01950163682002114 3.2922150008373757e-09 8.482511810571467 0.07501499661026734 SDGSDTTEQESTNLPS(ph)PNK ddPTM_A549_PD325901_60min_R1 2 SDGSDTTEQESTNLPSPNK 19 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 SDGSDTTEQESTNLPS(1)PNK;SDGSDTTEQESTNLPS(1)PNK 234.04 6.368899999999998e-76 24450000.0 2782.9 2941.1000000000004 3119.8999999999996 3058.0 3563.6 2964.6000000000004 3796.2000000000003 3272.2 3863.8999999999996 3853.4 4039.2000000000003 True False 3065.4179593372983 3188.956818791347 3331.6351754827833 3246.8857147781046 3313.305029752598 2940.4572805099983 3940.6664683603462 3206.9334040087583 3701.513720074198 3610.095666374642 3542.4040065984345 0.865349619531636 0.9002239193641601 0.9405011876897575 0.916576908994607 0.9353266944089116 0.8300739483787873 1.1124271712148215 0.9052986045733927 1.0449157445563493 1.0191089609344723 1.0 11.790513043640019 -7.754547251464917 24.99999419503946 1.0174308946755874 0.9025811685264797 0.5431522715432681 0.05394877601026888 92.84480465000227 336776.8613914475 0.007728545017889719 0.011321863558677857 1.7597571908902578e-08 7.754547251464917 -0.11484972614910771 SDGSENLCT(ph)PQQSR ddPTM_A549_MK2206_60min_R1 1 SDGSENLCTPQQSR 14 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 SDGS(0.021)ENLCT(0.965)PQQS(0.013)R 54.898 0.018068999999999998 2975400.0 251.03 344.27 516.05 215.81 415.54 393.57 271.36 285.33 384.15 648.1 631.23 True False 293.3977269057467 361.7918725039383 589.2336497856941 268.6834596880791 354.4146164625095 435.217316169378 320.6625994592661 325.7764012864772 297.1406383614949 501.6937598750013 474.47816993826956 0.6183587475561168 0.7625047798321428 1.2418561845792704 0.5662714887874299 0.7469566334497949 0.9172546678512112 0.6758216073480997 0.6865993462436033 0.6262472273490547 1.0573589928073457 1.0 8.890197902213334 -11.015608222059102 1.327877316121425 0.9987972578523714 0.7527614623363802 0.2450547691329592 0.17857385032305154 0.5658472760010853 1.791028590247898 0.12302845119039046 0.0284444181137806 9.646988880528844e-12 11.015608222059102 -0.2460357955159912 SDGSENLCT(ph)PQQSR ddPTM_A549_PD325901_60min_R1 2 SDGSENLCTPQQSR 14 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 SDGSENLCT(0.997)PQQS(0.003)R;SDGSENLCT(1)PQQSR 114.56 4.5201999999999995e-06 8374400.0 1335.1799999999998 1326.7 1005.83 1058.68 1710.96 1374.6599999999999 1320.6999999999998 1626.26 1046.42 1218.63 1512.5900000000001 True False 1470.7264906924333 1438.5056650540544 1074.091672347142 1124.072259163271 1590.788072091567 1363.4652247270703 1370.95996121477 1593.8229685237097 1002.4426064235723 1141.6854938273034 1326.5510190980208 1.1086844527792408 1.0843952809535786 0.8096874201472201 0.8473645136751514 1.1991910218222985 1.0278272038524 1.0334769952134557 1.2014788316301763 0.7556758782675214 0.860641978627844 1.0 10.373464447288073 -8.771483855769214 24.99939419607892 0.884624737573701 1.0312753294501573 0.25006398040469746 0.12771932154741794 262.883810128753 654281.6600361858 0.025176262465917188 0.026954452100188965 1.6924511575411788e-09 8.771483855769214 0.14665059187645635 SDGSGESAQPPEDS(ph)SPPASSESSSTR ddPTM_A549_MK2206_60min_R1 1 SDGSGESAQPPEDSSPPASSESSSTR 26 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 SDGSGES(0.001)AQPPEDS(0.428)S(0.428)PPAS(0.062)S(0.035)ES(0.011)S(0.011)S(0.011)T(0.013)R 46.968 0.0036288 2759100.0 375.68 231.07 233.04 255.09 602.27 355.02 163.42 377.87 549.65 476.58 442.93 True False 439.08559950583935 242.83047602023137 266.0885761962179 317.5870614514251 513.6768808222449 392.587980756797 193.11129865725695 431.43422967834147 425.15515261068765 368.9202470008152 332.93825675388945 1.3188199030861594 0.7293558823422733 0.7992129795793117 0.9538917652415893 1.5428592851735836 1.1791615195696812 0.5800213545300272 1.295838555426993 1.276978971284053 1.1080740633345838 1.0 8.37911084474671 -6.551435592554941 24.98414667563001 1.1357599201516417 0.91871834599076 0.10597837655946307 0.26136792751537286 327.26602498094314 286321.30446768965 0.037223023218679104 0.07748682410750742 2.8090819389065017e-07 6.551435592554941 -0.21704157416088177 SDGSGESAQPPEDS(ph)SPPASSESSSTR ddPTM_A549_PD325901_60min_R1 2 SDGSGESAQPPEDSSPPASSESSSTR 26 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 SDGSGESAQPPEDS(0.478)S(0.478)PPAS(0.018)S(0.022)ES(0.001)S(0.001)S(0.001)T(0.001)R;SDGSGESAQPPEDS(0.319)S(0.319)PPAS(0.13)S(0.154)ES(0.053)S(0.016)S(0.005)T(0.005)R 79.898 1.2559000000000001e-06 4358100.0 560.4200000000001 140.52 436.20000000000005 509.91999999999996 133.98 232.38 529.15 506.47 361.98 358.77 448.38 True False 617.3134258406011 152.3621135549829 465.8031550836855 541.4166002876552 124.5697070059078 230.48757432534347 549.2870928119905 496.3680585319713 346.76723941935796 336.1172009719286 393.23210251500444 1.5698449386314954 0.3874610251312563 1.1845501730518353 1.3768372338496868 0.3167841745605056 0.5861362102717664 1.396852111765294 1.262277559124338 0.8818385813404603 0.854755242062424 1.0 8.6192372943847 -7.824493784998338 0.008248543532626915 0.7907837257974581 1.1428153246064274 0.0 0.40146168346003525 130199.44764603126 537.0096102512871 11283.944517356467 11627.5806260151 1.4979806898492813e-08 7.824493784998338 0.3520315988089693 SDGSGESAQPPEDSS(ph)PPASSESSSTR ddPTM_A549_MK2206_60min_R1 1 SDGSGESAQPPEDSSPPASSESSSTR 26 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 SDGSGES(0.001)AQPPEDS(0.247)S(0.44)PPAS(0.092)S(0.104)ES(0.028)S(0.028)S(0.028)T(0.032)R 40.336 0.028584 3422200.0 204.57 233.2 256.64 234.66 357.69 329.5 290.94 211.81 319.21 290.91 454.37 True False 239.09641474369036 245.06888392226583 293.03541106675834 292.1517105342877 305.0742748290779 364.36747129560166 343.80003201164055 241.8347161409201 246.90944467362417 225.19322895423036 341.5373890259519 0.7000592685491382 0.717546282769188 0.8579892582258158 0.8554018386317535 0.8932382943464404 1.0668450453836404 1.0066248763924255 0.7080768428622735 0.7229353289190328 0.6593516147572321 1.0 8.415899712681554 -5.772597935001634 3.3325331945869245 0.879501853402457 0.7004171383702166 0.18102981982313593 0.12393085320320754 0.28627242791296453 6.48458662550364 0.01831702064064398 0.07613046311793924 1.6881151403938706e-06 5.772597935001634 -0.17908471503224044 SDGSGESAQPPEDSS(ph)PPASSESSSTR ddPTM_A549_PD325901_60min_R1 1 SDGSGESAQPPEDSSPPASSESSSTR 26 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 SDGSGESAQPPEDS(0.236)S(0.737)PPAS(0.008)S(0.009)ES(0.002)S(0.002)S(0.003)T(0.003)R 77.52199999999999 1.6868e-06 2779400.0 575.11 475.95 438.33 606.05 437.41 519.08 478.53 434.64 658.16 699.24 508.94 True False 633.4947438263946 516.0599768466702 468.0777096924157 643.484332060585 406.68783058258043 514.8527845804256 496.74072101166365 425.970764231516 630.4998240130528 655.0898670669549 446.3436064364738 1.4192983492787126 1.156194396883601 1.0486936587474904 1.441679286498684 0.9111541528050601 1.1534897714586225 1.1129110260535628 0.9543561464504647 1.412588451858533 1.4676806335304615 1.0 8.802010950244066 -5.260506854807068 21.935410367326007 1.162254857075002 1.419298776391796 0.13229665860104456 0.1863707015530985 22.012083541536693 517254.132196914 0.024881919931857323 0.20748404764090322 5.488998918254192e-06 5.260506854807068 0.25704391931679393 SDHTLT(ph)SPGGGGK ddPTM_A549_MK2206_60min_R1 2 SDHTLTSPGGGGK 13 0 C9J0Q5;C9J7T7;A0A384DVL6;H7C2R5;Q9Y618;Q9Y618-4 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SDHT(0.002)LT(0.52)S(0.478)PGGGGK;SDHT(0.002)LT(0.604)S(0.395)PGGGGK 91.81200000000001 0.00016082 15521500.0 3071.3 3387.0 3992.6 2841.2 4045.8 3026.3 3221.2 2996.2 5270.4 5017.2 4975.4 True False 3589.6603539243115 3559.3838329533205 4558.810716276256 3537.2941275463163 3450.6681794388514 3346.5410573046447 3806.4503441118363 3420.9205254776693 4076.66281509937 3883.811035403268 3739.8708659456406 0.9598353746945891 0.9517397687081147 1.218975435164803 0.9458332264239552 0.9226704084517466 0.8948279706065356 1.0178026141951724 0.9147162156393538 1.0900544326865602 1.0384880052325633 1.0 11.868772740797407 -8.772412452194754 24.985139296194188 1.0425256978645028 0.9810350773363803 0.10161635691910953 0.085191925066193 394.30808177232507 897816.3594296767 0.015348556536150984 0.016415028373143056 1.6888362713811758e-09 8.772412452194754 -0.061490620528122486 SDHTLTS(ph)PGGGGK ddPTM_A549_PD325901_60min_R1 2 SDHTLTSPGGGGK 13 0 C9J0Q5;C9J7T7;A0A384DVL6;H7C2R5;Q9Y618;Q9Y618-4 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SDHT(0.001)LT(0.132)S(0.868)PGGGGK;SDHT(0.001)LT(0.164)S(0.835)PGGGGK 92.939 5.4464e-05 21635700.0 5730.4 5771.0 4855.1 4911.0 5803.5 5470.4 4918.5 5328.4 5275.3 5269.6 6002.9 True False 6312.145989502481 6257.34242332626 5184.596282088033 5214.341316309765 5395.882180988103 5425.850876105336 5105.676209006475 5222.120881951066 5053.597486349912 4936.876556684437 5264.581355518352 1.1989834638771548 1.1885736017294695 0.984806945124615 0.9904569735339116 1.0249404115166956 1.0306329240059973 0.969816185603189 0.991934691345822 0.9599239037407437 0.9377529234132902 1.0 12.362103096002098 -5.75676547968121 8.503583812259615 0.9876829338237709 1.194532578323183 0.9078254723893318 0.025314768881267994 0.021038245234422794 13.595027822063201 0.0033155718209560026 0.011719825572279756 1.750791866245046e-06 5.75676547968121 0.20684964449941212 SDIDEIVLVGGSTR ddPTM_A549_PD325901_60min_R1 2 SDIDEIVLVGGSTR 14 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 125.28 1.7541999999999999e-06 3522800.0 2428.1 2742.7 2468.7 2128.08 3013.0 2587.6000000000004 2649.6 3073.0 2743.0 2811.1 2927.3999999999996 False True 2674.5989245272544 2973.8369545064857 2636.2408274990685 2259.5266683796567 2801.377274285715 2566.527443516046 2750.4319779167527 3011.7066042781353 2627.721249039447 2633.6066662546723 2567.3483583175503 1.04177483973386 1.1583301287774277 1.026834094780447 0.8801013158418373 1.0911558866602467 0.9996802479886125 1.0713123402229614 1.1730806201351593 1.02351565985438 1.025808070697715 1.0 11.326063350236096 SDIGEVILVGGMTR ddPTM_A549_MK2206_60min_R1 1 SDIGEVILVGGMTR 14 0 P38646;H0YBG6 P38646 HSPA9 Stress-70 protein, mitochondrial 0 91.855 0.000176 1284500.0 607.77 708.11 677.84 618.85 687.74 737.19 507.96 623.41 1117.1 729.38 653.41 False True 710.3467174501277 744.1497744176488 773.9679046036917 770.4682777812321 586.574357043669 815.1989564928823 600.2497568592596 711.780276613054 864.0786336421339 564.6125514235903 491.15026380141074 1.4462920409574407 1.5151163081091912 1.5758271177812786 1.5687017488659223 1.1942869632272897 1.6597750557709072 1.22213058018831 1.4492108201347758 1.7592958760814412 1.1495719193014278 1.0 8.940020663756396 -11.004789236227902 1.2820761904202125 0.999683053851635 1.510624990190039 0.4731271949055217 0.1650362848212788 0.2725970380580149 0.7968669900792478 0.12094649995879195 0.027439552754786278 9.890329574057982e-12 11.004789236227902 0.510941936338404 SDIS(ph)PLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.008)DIS(0.992)PLT(1)PR;S(0.063)DIS(0.937)PLT(1)PR 81.017 0.0024824 8157600.0 1515.08 1046.0900000000001 1242.4 1207.44 2113.2 1439.81 1326.3200000000002 1692.82 1982.4099999999999 1551.25 1809.1599999999999 True False 1770.7884638503706 1099.3315127883495 1418.59100182879 1503.2628542040409 1802.351079339113 1592.1697385314726 1567.2951758358397 1932.7824190438234 1533.3973002582602 1200.8215476100847 1359.8956417241247 1.302150260298872 0.8083940260258334 1.043161664986476 1.10542515769677 1.325359846770321 1.170802883457191 1.1525113602458248 1.4212726033840157 1.1275845389975394 0.8830247783481678 1.0 10.409280228090786 -4.920141353100812 20.70122080862324 1.1016118325152238 10.326188882587154 0.1040231450618383 0.16728088457663495 981.9755669308244 256839.23978175496 0.021545147081979982 3796.2067973059347 1.2018731882178769e-05 4.920141353100812 9.22457705007193 SDIS(ph)PLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.012)DIS(0.988)PLT(1)PR;S(0.187)DIS(0.814)PLT(1)PR 73.781 0.0033649 9426900.0 1356.12 1577.01 1557.47 1048.1 2074.29 1314.3400000000001 1087.29 1263.2800000000002 1808.6 1970.25 2031.35 True False 1493.7923040772212 1709.9101672170757 1663.1692800279404 1112.8387565921937 1928.5990263120202 1303.636450808039 1128.667415937918 1238.0828893760113 1732.5908315759189 1845.848078755032 1781.5068277886028 0.838499342678061 0.959811178124756 0.9335744629687692 0.6246615164386254 1.0825661716413426 0.7317605694648122 0.6335465002617705 0.694963875559687 0.9725423470459534 1.036116196672845 1.0 10.798882297405195 -8.878684578431486 8.520214708013524 0.9878788675225906 0.8156079878853459 0.2818832617815775 0.13490960902024787 0.2579013335553873 18.267127087935084 0.023282970647322408 0.024745015157438967 1.3222556199578922e-09 8.878684578431486 -0.17227087963724463 SDIS(ph)PLTPR ddPTM_A549_MK2206_60min_R1 2 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.001)DIS(0.726)PLT(0.274)PR;S(0.335)DIS(0.663)PLT(0.003)PR 125.74 7.028399999999999e-05 259830000.0 3591.2 3686.1 3312.8 3522.2 5545.9 3947.9 4419.7 4018.9 6023.5 6268.9 6053.9 True False 4197.30676358968 3873.7067453939258 3782.604854200267 4385.139158117565 4730.105456609307 4365.664157596074 5222.702280476553 4588.591382365065 4659.186867552947 4852.75113605986 4550.549550859893 0.9223735983265003 0.85126130417851 0.8312413285304163 0.963650457841719 1.0394580706665384 0.9593707548511624 1.1477080344042505 1.0083598323850762 1.0238734498940958 1.066409909797128 1.0 12.151825068748083 -6.46139061557234 3.9604320770529506 1.019171004552132 0.8676119251601054 0.6695045683412624 0.050496835285360454 0.10020477482753971 3.1093552191045526 0.006573552138196238 0.015627483110307393 3.456283709804703e-07 6.46139061557234 -0.15155907939202662 SDIS(ph)PLTPR ddPTM_A549_PD325901_60min_R1 2 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.145)DIS(0.845)PLT(0.01)PR;S(0.353)DIS(0.64)PLT(0.008)PR 111.73 0.00030804 436760000.0 7729.5 7425.6 7042.1 7205.0 7975.0 7438.7 7039.1 7061.1 6649.4 6658.299999999999 8188.799999999999 True False 8514.193149842848 8051.381372145468 7520.019253587394 7650.036486257764 7414.863512256421 7378.121693493121 7306.976802443318 6920.2608211742145 6369.948841911374 6237.8938016874135 7181.629513080122 1.1855517100033754 1.1211078707807525 1.0471187966311757 1.0652229375414757 1.032476473306163 1.0273603894568943 1.0174538785570737 0.9636059349163211 0.886978203248941 0.868590309528798 1.0 12.810095513628358 -5.9684323905612064 0.46171214888333456 0.948363057791052 1.2379234514336757 0.767490781890335 0.04234343241114717 1.1452133202993204 0.24206810059455755 0.011134459023110346 0.16000573184968095 1.0753940009212588e-06 5.9684323905612064 0.28956039364262365 SDISERPSVDDIES(ph)ETGSTGALETR ddPTM_A549_PD325901_60min_R1 1 SDISERPSVDDIESETGSTGALETR 25 1 E9PK05;O14523;O14523-2 E9PK05 C2CD2L C2 domain-containing protein 2-like 1 SDIS(0.002)ERPS(0.002)VDDIES(0.341)ET(0.302)GS(0.302)T(0.047)GALET(0.003)R 50.229 0.0023829999999999997 1616200.0 257.82 178.47 279.69 213.65 426.72 530.9 118.95 451.52 117.33 125.27 301.92 True False 283.9936966029475 193.51029324051947 298.67144531259964 226.84667526564488 396.7486593040827 526.5765264193338 123.47670734193753 442.51407938941225 112.39902812606579 117.36043082128809 264.7857540285697 1.0725414501427646 0.7308183703102101 1.127973996971052 0.8567178249369438 1.4983761522958463 1.9886890378646185 0.46632685279818603 1.671215587156045 0.4244904660314097 0.44322788909793537 1.0 8.048681694301996 -8.779089299727223 24.999937817283612 0.7282316521693283 1.1635627846659764 0.23425489412900324 0.4343333968160172 314.1663033852851 444993.93863089633 0.07584150055744462 0.08082460649213986 1.6630706542557267e-09 8.779089299727223 0.4353311324966481 SDISPLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SDISPLT(1)PR;SDISPLT(1)PR 146.11 3.255e-05 847490000.0 9475.4 10164.4 9418.3 7821.9 12640.6 8587.1 9024.5 8091.1 13079.3 11141.1 10828.5 True False 11074.615868711753 10681.72454433739 10753.95656191571 9738.265851138436 10781.184484901563 9495.781222344345 10664.134834979905 9238.03820295453 10116.859433350253 8624.317772170005 8139.484598603602 1.3606040695269204 1.3123342657555899 1.3212085398823217 1.1964229102183104 1.3245537053723486 1.1666317574915528 1.3101732309696155 1.134965990910456 1.2429361233862262 1.0595655864561229 1.0 12.990721728959517 -14.999999999998062 0.14656520919748106 0.03420365411106118 1.3564036341763879 0.7277294065739729 0.05947159406385859 20.146339968376708 0.19576358684467107 5.626153155291283 0.1098802595416116 1.0000000000044625e-15 14.999999999998062 1.3221999800653268 SDISPLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SDISPLT(1)PR;SDISPLT(1)PR 126.71 6.1039e-05 777840000.0 14114.3 14306.9 14793.5 15617.8 15913.599999999999 15273.099999999999 15956.8 16036.7 15602.7 17469.9 17867.4 True False 15547.17334560151 15512.592673069918 15797.475870542177 16582.476035402695 14795.88363493965 15148.720937380165 16564.044755895993 15716.835437952226 14946.972778850826 16366.84753256821 15669.823070780565 0.9921728710895429 0.9899660387357 1.008146409770232 1.0582427102399101 0.9442278683113822 0.9667448616971243 1.0570664825681968 1.0030001849388666 0.953869913612641 1.044481961196319 1.0 13.935701269867376 -8.67977450904569 24.969874874213698 0.9782161628190645 1.0027700812163456 0.0 0.038746206806036625 52.417472775064915 16022.980047586228 0.005945841460808457 0.006741950217947023 2.090381200372798e-09 8.67977450904569 0.02455391839728105 SDISPLT(ph)PRES(ph)SPLYSPTFSDSTSAVK ddPTM_A549_MK2206_60min_R1 1 SDISPLTPRESSPLYSPTFSDSTSAVK 27 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.005)DIS(0.13)PLT(0.858)PRES(0.522)S(0.478)PLY(0.003)S(0.004)PT(0.001)FSDSTSAVK 69.873 0.00010447 4933400.0 901.89 1475.4 1508.8 1213.1 1538.5 1181.3 1136.3 1208.4 1644.4 2419.9 1909.6 True False 1054.1069829065211 1550.4915580570794 1722.7705276555675 1510.309554458129 1312.1886880386262 1306.3043819165239 1342.7510014945606 1379.694400569793 1271.9460255672054 1873.2429093064584 1435.3936177211458 0.7343678903770232 1.080185629164678 1.2002077384116183 1.0521919115510079 0.9141664501211021 0.9100670128312497 0.9354583891952466 0.9611958584295632 0.8861304731078348 1.3050377862766656 1.0 10.487230695755159 -6.758169654194384 24.991534219518066 0.9407640930959549 1.0343752161243776 0.0 0.15409715351827702 132.0610979834819 1009368.3985353627 0.015446212255381491 0.03113532561915251 1.7451402925257106e-07 6.758169654194384 0.09361112302842267 SDISPLT(ph)PRES(ph)SPLYSPTFSDSTSAVK ddPTM_A549_PD325901_60min_R1 1 SDISPLTPRESSPLYSPTFSDSTSAVK 27 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.001)DIS(0.022)PLT(0.975)PRES(0.524)S(0.474)PLY(0.001)S(0.003)PTFSDSTSAVK 84.073 9.1334e-07 11232000.0 1845.9 1524.9 2196.3 2141.1 1875.5 2227.9 1555.7 1813.7 2061.6 1934.6 2093.7 True False 2033.2944091202423 1653.4086746370153 2345.3541254248007 2273.3508842090896 1743.7713501237506 2209.75672105789 1614.9030148117054 1777.5243306798745 1974.9581214071184 1812.4490258390986 1836.1881730578177 1.1073453358182686 0.9004570985138095 1.2772950832806342 1.2380816506530818 0.9496691982389993 1.2034478565331166 0.8794866661854136 0.968051290581918 1.0755750147972067 0.9870715063047235 1.0 10.842498198765869 -7.741738140258905 24.9999717905792 1.0197957698594438 1.1088359473480676 0.2081318656038742 0.11666994692943705 410.89357877917416 521404.08921622805 0.01759475880496962 0.02607717235250599 1.8124325773090563e-08 7.741738140258905 0.0890401774886238 SDKNQQGFS(ph)PK ddPTM_A549_MK2206_60min_R1 4 SDKNQQGFSPK 11 1 D6RCT7;C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87 D6RCT7 KIF15 Kinesin-like protein;Kinesin-like protein KIF15 1 SDKNQQGFS(1)PK;SDKNQQGFS(1)PK;SDKNQQGFS(1)PK;S(0.001)DKNQQGFS(0.999)PK 88.561 8.4876e-05 145303000.0 12314.2 12979.5 13119.6 12654.7 16830.0 12634.0 13406.099999999999 12051.0 19326.3 18050.6 17971.4 True False 14392.535906715324 13640.101110073105 14980.156557946706 15755.10206809107 14354.329294566187 13970.921494229542 15841.814838630848 13759.266154639676 14948.92390775935 13972.956923313837 13508.605394592489 1.0654346238048136 1.0097342184214853 1.1089343511317076 1.166301154551295 1.062606307258945 1.0342238214924924 1.1727202309849354 1.0185556356652128 1.1066222952773068 1.0343744979705476 1.0 13.721591120522517 -10.877512511614471 0.9505054989145398 0.9962368140104445 1.0844375673694406 0.18108493362035671 0.05211162080477638 0.6717971211830236 0.998283809919323 0.043116941052782166 0.008734199056719497 1.3258289213294326e-11 10.877512511614471 0.08820075335899613 SDKNQQGFS(ph)PK ddPTM_A549_PD325901_60min_R1 4 SDKNQQGFSPK 11 1 D6RCT7;C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87 D6RCT7 KIF15 Kinesin-like protein;Kinesin-like protein KIF15 1 SDKNQQGFS(1)PK;S(0.001)DKNQQGFS(0.999)PK;SDKNQQGFS(1)PK;SDKNQQGFS(1)PK 102.66 8.4097e-05 269954300.0 23650.079999999998 21511.96 21518.28 23460.07 26950.29 25015.69 25925.91 25541.02 24136.39 24030.050000000003 27439.47 True False 26051.018711331286 23324.848365430196 22978.639880729406 24909.14524221528 25057.39460385317 24811.97051456558 26912.534692252306 25031.584319557423 23122.021464857196 22512.788542006016 24064.58914313169 1.0825457503714144 0.9692601949984829 0.9548735589897979 1.0350953882511906 1.04125586582079 1.0310573086034673 1.1183459036920003 1.040183323749025 0.9608317568744567 0.9355151840783213 1.0 14.554624171801898 -8.752461961010841 24.83034336422054 0.9815038847832671 1.032258007977558 0.29237730131423245 0.04566153297911139 211.18127948704057 584098.8222150861 0.00787657697042688 0.008866575355640888 1.7682270864425508e-09 8.752461961010841 0.05075412319429096 SDKQYAENYTRPS(ph)SR ddPTM_A549_MK2206_60min_R1 3 SDKQYAENYTRPSSR 15 2 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 SDKQYAENY(0.001)T(0.025)RPS(0.547)S(0.428)R;SDKQYAENYT(0.126)RPS(0.509)S(0.365)R;SDKQYAENYT(0.019)RPS(0.49)S(0.49)R 81.016 7.436899999999999e-05 148422000.0 8265.400000000001 10365.599999999999 9838.2 7882.8 12838.3 9810.1 9239.599999999999 8217.6 12893.7 14194.8 14804.399999999998 True False 9660.397450371502 10893.164764942701 11233.404695904701 9814.086353872342 10949.803076793176 10848.198270582647 10918.315720680406 9382.469965344533 9973.297537007955 10988.184821283246 11128.058899345908 0.8681116390334102 0.9788917243763858 1.009466682151097 0.8819225745155969 0.9839814091419655 0.9748509033520921 0.9811518630012077 0.8431362603495944 0.8962297582370068 0.9874305052365527 1.0 13.44191434055674 -8.136319691029902 0.004066832335937484 1.8864018554640187 5.118943337890144e-07 0.049913527055450824 0.056134939839808266 24948.84646034798 65.30163089914049 15075.924808435546 15211.486712061642 7.306010784934827e-09 8.136319691029902 -1.886401343569685 SDKQYAENYTRPS(ph)SR ddPTM_A549_PD325901_60min_R1 3 SDKQYAENYTRPSSR 15 2 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 SDKQYAENYT(0.008)RPS(0.589)S(0.402)R;SDKQYAENY(0.001)T(0.093)RPS(0.512)S(0.394)R;SDKQYAENYT(0.004)RPS(0.57)S(0.425)R 89.01100000000001 7.3116e-06 312115000.0 13954.599999999999 12824.5 13708.099999999999 15004.600000000002 14968.0 15087.0 14948.0 15178.9 15737.6 14952.9 16831.3 True False 15371.260719166426 13905.265622586669 14638.414099501759 15931.400064080957 13916.699316796748 14964.136474078905 15516.854319859462 14876.144931883315 15076.203400978207 14008.77134212212 14761.15680240152 1.0413317143725245 0.942017337037189 0.9916847504201167 1.0792785604370145 0.9427919168592949 1.0137509325586436 1.0511950064330322 1.0077899131498345 1.021342947764462 0.949029370099436 1.0 13.849518166509517 SDKQYAENYTRPSS(ph)R ddPTM_A549_MK2206_60min_R1 1 SDKQYAENYTRPSSR 15 2 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 SDKQYAENYT(0.003)RPS(0.246)S(0.751)R 85.855 1.9089e-05 103300000.0 4058.0 5448.4 4485.3 4150.3 6386.8 4912.0 4625.7 4575.9 6803.1 7314.4 7268.7 True False 4742.891191425409 5725.7002880020245 5121.382984950635 5167.123686314046 5447.310180542804 5431.784579678285 5466.129813969365 5224.547838106025 5262.208712318325 5662.071959928581 5463.681184085512 0.8680761251663798 1.0479565141318488 0.9373502611880218 0.9457220346905907 0.997003667858514 0.9941620670510325 1.0004481648546746 0.9562321925598387 0.9631251412776368 1.0363108258258074 1.0 12.415657586818986 -5.237807202661922 24.82760252720012 0.9813093061046861 0.8680759823806429 0.49723282801523105 0.03404881545119002 3650.5271048915374 3835128.841659181 0.003922739778734663 0.3259762324613667 5.783527398729722e-06 5.237807202661922 -0.11323332372404327 SDKQYAENYTRPSS(ph)R ddPTM_A549_PD325901_60min_R1 1 SDKQYAENYTRPSSR 15 2 C9JSU1;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 SDKQYAENYT(0.008)RPS(0.255)S(0.736)R 84.166 6.1355e-05 55819000.0 3680.9 3460.6 3996.8 4537.7 4280.5 4478.8 4028.8 4342.1 4842.2 4697.4 4325.6 True False 4054.5822582646397 3752.2369069767574 4268.046882710854 4817.983423135576 3979.8524469233357 4442.326137741405 4182.1181886439535 4255.493409188444 4638.699173204091 4400.805362336701 3793.578622237616 1.0688014305271134 0.9891021857255001 1.1250714187632618 1.2700365282778092 1.0491024025688567 1.1710120126945278 1.1024203279006144 1.1217622811988464 1.2227766009678709 1.1600669975678313 1.0 11.889343722670912 -5.7759926650333915 24.349098999424942 1.1207087979264034 1.028951815683025 0.21697035573632906 0.07387014502591999 231.3315823690423 387043.9168867957 0.012641373412475445 0.039573252204407175 1.6749711650200302e-06 5.7759926650333915 -0.09175698224337836 SDKS(ph)PDLAPTPAPQSTPR ddPTM_A549_MK2206_60min_R1 4 SDKSPDLAPTPAPQSTPR 18 1 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;Q9BY44-2 F8WAE5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed 1 S(0.003)DKS(0.997)PDLAPTPAPQSTPR;S(0.001)DKS(0.999)PDLAPTPAPQSTPR;S(0.067)DKS(0.933)PDLAPTPAPQSTPR;S(0.001)DKS(0.999)PDLAPTPAPQSTPR 233.49 5.093999999999999e-65 1582843000.0 24568.0 27756.199999999997 24880.1 16466.8 25142.0 25791.1 24072.1 24295.899999999998 35205.9 36688.4 37367.1 True False 28714.477770068854 29168.87202368437 28408.472299259854 20501.166739222743 21443.645105406016 28520.297083253387 28445.688975690573 27739.918228073187 27231.819862269815 28400.464958799574 28087.817790504752 1.0223107392762976 1.0384883667803155 1.0114161417290133 0.7298953194631332 0.7634500218331366 1.0153973974046084 1.0127411530456025 0.9876138628843864 0.9695242280970537 1.0111310594018632 1.0 14.777656921952108 SDKS(ph)PDLAPTPAPQSTPR ddPTM_A549_PD325901_60min_R1 5 SDKSPDLAPTPAPQSTPR 18 1 F8WAE5;Q9BY44-4;Q9BY44-3;Q9BY44;Q9BY44-2 F8WAE5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed 1 S(0.006)DKS(0.994)PDLAPTPAPQSTPR;S(0.001)DKS(0.999)PDLAPTPAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;S(0.031)DKS(0.969)PDLAPTPAPQSTPR;S(0.007)DKS(0.441)PDLAPT(0.058)PAPQS(0.294)T(0.198)PR 209.73 1.9062000000000003e-55 2255594000.0 66284.1 66425.6 68538.2 51313.1 60401.2 72369.7 71505.3 71366.59999999999 77280.70000000001 75003.8 77758.0 True False 73013.21303622473 72023.51843266345 73189.61440567784 54482.59364649455 56158.82808482785 71780.34515729756 74226.47332070155 69943.13717698552 74032.86092987352 70268.04726777137 68194.25894857413 1.0706650994079223 1.0561522266409111 1.0732518475033324 0.7989322633094427 0.8235125500399924 1.052586335917628 1.088456337309514 1.0256455346150213 1.0856172069514287 1.0304100132646223 1.0 16.057362668138285 SDLDYIRS(ph)PLPFQNR ddPTM_A549_PD325901_60min_R1 2 SDLDYIRSPLPFQNR 15 1 A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6;H7BYL6 A0A0A0MRF6 AKAP9 A-kinase anchor protein 9 1 S(0.028)DLDY(0.002)IRS(0.97)PLPFQNR;S(0.008)DLDY(0.002)IRS(0.991)PLPFQNR 67.43 0.00083415 34468000.0 5201.700000000001 4596.0 5989.5 6117.200000000001 6596.9 5548.2 5627.4 6513.6 7395.0 7341.4 7325.1 True False 5729.772754710854 4983.321049663402 6395.983487789397 6495.0455508308105 6133.556502069515 5503.017298699844 5841.553786431436 6383.681138179648 7084.2138668052185 6877.862751108834 6424.159137634725 0.8919101522787724 0.7757156917968541 0.9956141108522256 1.0110343488816786 0.9547640976290936 0.8566128548188439 0.909310255440248 0.9936990976425312 1.1027457002588381 1.0706245912894923 1.0 12.649291916034247 -8.44002229472923 3.817711466888261 1.0486166719170498 0.9149845467272125 0.4870329364390388 0.06518075803520239 0.1743659249672524 4.783384318650081 0.01224601716866038 0.014738904553123202 3.6305941645097013e-09 8.44002229472923 -0.13363212518983725 SDLLELDCQLT(ph)R ddPTM_A549_PD325901_60min_R1 2 SDLLELDCQLTR 12 0 Q7L5L3-1;Q7L5L3 Q7L5L3-1 GDPD3 Glycerophosphodiester phosphodiesterase domain-containing protein 3 1 S(0.001)DLLELDCQLT(0.999)R;SDLLELDCQLT(1)R 57.163999999999994 0.015704 26002000.0 11280.4 11893.8 11568.6 11320.7 12070.7 12906.0 10480.2 11666.3 10783.9 12913.0 13349.9 True False 12425.577903808424 12896.132267294724 12353.714763643107 12019.953927824885 11222.895673654371 12800.897814970669 10879.029745985488 11433.606494464697 10330.690185022428 12097.670976253634 11707.946931988618 1.0612943478466823 1.101485370766392 1.0551563681835723 1.0266491638242565 0.9585707672615954 1.0933511989190756 0.9292004660750255 0.976568014945954 0.882365648309933 1.0332871379182806 1.0 13.515200491193653 -6.984950803622233 0.7190880393260294 0.9457599741699024 1.082213600381064 0.30338309908040184 0.05483634509221182 0.5270949158017901 0.5004419401291451 0.01046935428141726 0.03651494677109691 1.0352594330312821e-07 6.984950803622233 0.13645362621116164 SDLNGLPS(ph)PVEER ddPTM_A549_MK2206_60min_R1 2 SDLNGLPSPVEER 13 0 E7EWN3;Q9C0A6 E7EWN3 SETD5 SET domain-containing protein 5 1 SDLNGLPS(1)PVEER;SDLNGLPS(1)PVEER 149.3 1.0008e-12 12648900.0 4036.2 3877.1000000000004 3540.8999999999996 3597.3 5496.0 4836.4 4193.6 4982.0 6266.1 5616.6 6314.1 True False 4717.411884384234 4074.427829566965 4043.0528641142614 4478.638661488936 4687.545680507174 5348.184637857507 4955.52283716236 5688.213756735112 4846.83835490554 4347.806159101889 4746.134709705222 0.993948164753467 0.8584728581840072 0.8518622229256892 0.9436391791262705 0.9876554221947723 1.1268505773595452 1.0441176115437614 1.1984939544812039 1.021218033486153 0.9160730626147623 1.0 12.212537333838197 -6.759898374577556 2.7859752573928143 1.0364155304600342 0.8984252064581255 0.41129253967659185 0.07671652111288244 0.1958514341230394 3.1133627374512556 0.010529257129563362 0.02268884540028275 1.7382075237804563e-07 6.759898374577556 -0.1379903240019087 SDLYS(ph)SGR ddPTM_A549_MK2206_60min_R1 1 SDLYSSGR 8 0 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 SDLYS(0.925)S(0.075)GR 72.365 0.0064061000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SDLYS(ph)SGRDR ddPTM_A549_MK2206_60min_R1 1 SDLYSSGRDR 10 1 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 SDLY(0.002)S(0.922)S(0.076)GRDR 44.511 0.04722 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SDLYSSGR ddPTM_A549_PD325901_60min_R1 2 SDLYSSGR 8 0 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 0 ; 70.525 0.0067266999999999995 3998100.0 3484.8 3799.6 2874.6 3628.7 4524.0 4007.9 3544.4 3943.7 4139.6 4147.5 4961.1 False True 3838.5743306258305 4119.805626697362 3069.687642374054 3852.8365576243623 4206.24984695273 3975.260991215011 3679.284081570101 3865.039809727199 3965.627007846773 3885.626142183222 4350.916151004034 0.882245071475355 0.9468823309193536 0.705526729506309 0.8855230539745674 0.9667503810621769 0.9136606758780366 0.8456343339829833 0.8883278085778067 0.9114464333980901 0.893059302300404 1.0 12.08710349880638 -10.608219301108836 0.30148898407341995 1.0514421142169303 0.8646375143816084 0.03393165033950396 0.07144369268383777 3.131591795454714 0.38553900722049206 0.20329488195778125 0.033671823037345436 2.4647944016796522e-11 10.608219301108836 -0.18680459983532194 SDNGTGYDT(ph)DSSQDSR ddPTM_A549_PD325901_60min_R1 1 SDNGTGYDTDSSQDSR 16 0 Q70EK8 Q70EK8 USP53 Inactive ubiquitin carboxyl-terminal hydrolase 53 1 S(0.006)DNGT(0.062)GY(0.056)DT(0.746)DS(0.062)S(0.062)QDS(0.006)R 44.188 0.059749000000000003 1101100.0 0.0 213.79 0.0 147.89 224.07 0.0 239.88 0.0 131.68 237.01 251.35 True False 0.0 231.80683359607016 0.0 157.02482941744069 208.33209619953553 0.0 249.00876466737273 0.0 126.145947529535 222.04514815162034 220.43554343892754 0.0 1.051585556393237 0.0 0.7123389765904289 0.9450930324095156 0.0 1.1296216607480158 0.0 0.572257747374049 1.0073019291153413 1.0 7.78421305528428 -10.287812658719954 0.7914032969002648 0.9901398486042808 0.5049531281946552 0.1760966694768652 0.4221937536433401 0.806568613874988 0.9581906133585508 0.2151379818479289 0.07476966253294069 5.154509463135623e-11 10.287812658719954 -0.4851867204096256 SDNNYS(ph)TPNER ddPTM_A549_PD325901_60min_R1 2 SDNNYSTPNER 11 0 O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-8 CTNND1 Catenin delta-1 1 S(0.002)DNNYS(0.614)T(0.384)PNER;S(0.003)DNNY(0.01)S(0.494)T(0.494)PNER 64.439 0.0062052 3631200.0 867.6400000000001 982.6400000000001 959.3499999999999 914.79 1103.38 727.85 896.53 778.13 878.98 1042.8400000000001 1043.19 True False 955.7221740771913 1065.4505213753796 1024.457260040196 971.2945006611708 1025.882395254356 721.9226309178985 930.6479397500397 762.6095867188243 842.0395273352875 976.9949044278125 914.8842433262571 1.044637265368632 1.1645741296207122 1.1197670825716297 1.0616583548644605 1.1213248044632853 0.789086309206938 1.01723026332432 0.8335585537534171 0.9203782155804465 1.0678890925869908 1.0 9.83744540623836 -7.215615879690437 24.99948182084926 0.9445254217892509 1.1045491941943326 0.5112150044756762 0.07987783483686371 251.13168798157665 137007.48281122255 0.010346553009638673 0.017920714956669043 6.086731161981684e-08 7.215615879690437 0.1600237724050817 SDNS(ph)RSSDEDSQATG ddPTM_A549_PD325901_60min_R1 1 SDNSRSSDEDSQATG 15 1 Q9UGH3-2;Q9UGH3 Q9UGH3-2 SLC23A2 Solute carrier family 23 member 2 1 S(0.033)DNS(0.293)RS(0.293)S(0.293)DEDS(0.078)QAT(0.011)G 46.3 0.027111 4559400.0 383.09 314.21 292.32 349.98 434.18 407.88 370.13 471.6 582.08 403.72 376.53 True False 421.98101478404726 340.6895794200907 312.1585930629593 371.59746973775043 403.68469463968563 404.55836051218307 384.21549969290743 462.1935680369571 557.617201837726 378.2290503007137 330.2191970203276 1.2778815362393088 1.031707370420135 0.9453072258659253 1.1253054731244945 1.222474944770808 1.225120659739474 1.1635165464630934 1.399656870973814 1.68862745373159 1.1453878324264435 1.0 8.367280182348685 -7.3375140947452655 1.2230157902869947 1.3310148442883327 1.084954206874546 0.1511887252476507 0.1819118692865641 0.6848292045628499 2.0201465092973687 0.04307135274254736 0.08663900613909149 4.597120686322357e-08 7.3375140947452655 -0.2460606374137868 SDPES(ph)PIKK ddPTM_A549_MK2206_60min_R1 4 SDPESPIKK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.003)DPES(0.997)PIKK;SDPES(1)PIKK;SDPES(1)PIKK;SDPES(1)PIKK 156.58 1.0377e-05 998574000.0 43464.4 43904.3 41736.0 38804.8 53904.8 41556.4 41498.2 40825.8 57942.0 57535.6 58506.0 True False 50800.128117444656 46138.84133957263 47654.7923795286 48311.977742013696 45975.47532725678 45953.870665094204 49037.88577859857 46612.98217376884 44818.22951436087 44538.26799979037 43977.34551654451 1.1551431201852185 1.049150211265365 1.0836213923280251 1.0985651174384428 1.045435434704911 1.0449441667143395 1.115071526091775 1.0599316904253075 1.0191208447881424 1.0127548053812123 1.0 15.424472904940759 -8.729083682372377 2.7394315582327544 1.0080076808750005 1.0811107695138034 0.5161508839735013 0.031205851814346732 0.14625695080989384 2.1819061621062983 0.005313717575820021 0.00583063257888027 1.8660201006473e-09 8.729083682372377 0.07310308863880288 SDPES(ph)PIKK ddPTM_A549_PD325901_60min_R1 6 SDPESPIKK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.064)DPES(0.936)PIKK;SDPES(1)PIKK;SDPES(1)PIKK;SDPES(1)PIKK;SDPES(1)PIKK;SDPES(1)PIKK 162.26 5.0494e-06 1294930000.0 73943.6 74972.1 76783.0 76613.6 89222.8 82599.8 82277.9 89429.5 84955.5 91068.0 97685.9 True False 81450.29983759856 81290.26198160778 81993.95611368775 81345.84806989 82956.09832995011 81927.13461467651 85409.03050869433 87645.75846641445 81385.11577570946 85317.95093823795 85671.15358194041 0.9507319142107173 0.9488638658735636 0.9570777640488336 0.9495126967338725 0.9683084079241039 0.9562977874030503 0.9969403578417398 1.023048655258102 0.9499710506158697 0.995877227877355 1.0 16.38652189439042 -7.699957020523215 10.78020892022741 0.9814163662725561 0.9552480490510594 0.46226693045491163 0.018553347361984884 0.5882622142878907 100.38410186649283 0.003531460828445514 0.005237279686850642 1.9954597836851574e-08 7.699957020523215 -0.026168317221496706 SDPVDPDKEPEKEDVSAS(ph)GPSPEATQLAK ddPTM_A549_PD325901_60min_R1 1 SDPVDPDKEPEKEDVSASGPSPEATQLAK 29 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SDPVDPDKEPEKEDVS(0.005)AS(0.803)GPS(0.192)PEATQLAK 186.07 3.9009e-67 57202000.0 3776.1 4263.4 3898.2 3665.8 4783.8 4175.2 4040.9 4075.1 4872.4 4483.0 4676.6 True False 4159.446892182103 4622.691680403598 4162.755293780885 3892.228140364153 4447.802391214074 4141.198555483146 4194.678660765328 3993.818933645892 4667.629972227421 4199.942614926436 4101.407847409942 1.014151005442878 1.1270987554487781 1.0149576556766193 0.9489980721673688 1.0844574733095325 1.0097017193982138 1.02274117006293 0.973767809062931 1.1380555521136602 1.024024620613802 1.0 12.001903498256338 -8.741416129004929 24.999779535682517 1.065192925210669 1.0265192130285985 0.04205073617714261 0.05568008726649463 522.8683060182916 652819.979373922 0.010979362249915477 0.012442041828274405 1.8137769188355949e-09 8.741416129004929 -0.03867371218207061 SDPVDPDKEPEKEDVSASGPS(ph)PEATQLAK ddPTM_A549_MK2206_60min_R1 1 SDPVDPDKEPEKEDVSASGPSPEATQLAK 29 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SDPVDPDKEPEKEDVS(0.002)AS(0.002)GPS(0.996)PEATQLAK 169.98 1.026e-57 35494000.0 2348.6 3751.6 2856.6 2682.6 3099.1 2529.2 2932.1 2650.9 4131.5 4158.1 3863.5 True False 2744.9862622429046 3942.5404156208065 3261.7088343722803 3339.83712042649 2643.2264953529457 2796.8382652529167 3464.824616282849 3026.6731930407695 3195.721846649787 3218.7823220741325 2904.0863228244925 0.9452151062690008 1.3575837552192047 1.1231445872449022 1.1500474673143288 0.9101749058141507 0.9630699484623904 1.193085959274443 1.0422118548105175 1.1004224707555015 1.1083631697778078 1.0 11.50386862217615 -2.000000045092669 0.011920201944978049 2.587467503044276e-07 2.3557277309697207 0.0010825377333650854 0.12289787262676925 12965.302951089428 11.616780091297914 956.6337214486927 1374.9653238707206 0.009999998961702975 2.000000045092669 2.3557274722229704 SDPVDPDKEPEKEDVSASGPS(ph)PEATQLAK ddPTM_A549_PD325901_60min_R1 1 SDPVDPDKEPEKEDVSASGPSPEATQLAK 29 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SDPVDPDKEPEKEDVSASGPS(1)PEATQLAK 231.0 3.2010999999999996e-105 48043000.0 4023.5 4460.4 4380.3 4847.4 5987.9 4563.2 5004.4 4220.6 5451.6 5508.8 6232.3 True False 4431.962758055848 4836.293561775159 4677.573498883691 5146.812888755845 5567.330561133565 4526.038812124137 5194.845180512755 4136.4168220033525 5222.4882104496755 5160.973427862309 5465.766609804763 0.8108583981807005 0.8848335296826572 0.8557945907336819 0.9416451993254226 1.0185818309816983 0.8280702663017305 0.9504330410292281 0.7567862145052522 0.9554905255342073 0.9442359684009008 1.0 12.416208142242564 -14.999999965315094 0.08927102593087069 1.3926936561634604 0.7990191714077446 0.11114476129615636 0.07466493436729306 125.17221261036968 0.8162261955582454 9.12767117334951 0.7346485772327337 1.0000000798649498e-15 14.999999965315094 -0.5936744847557158 SDPVVSYR ddPTM_A549_MK2206_60min_R1 2 SDPVVSYR 8 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 79.45100000000001 0.011335 6919500.0 2770.2 3201.5 2687.5 2422.6000000000004 3820.7 3049.2 2309.1000000000004 2556.2 4048.6 4218.1 4235.1 False True 3237.7420351125334 3364.4426752878812 3068.627911634635 3016.137108754647 3258.6800912506833 3371.8643201048526 2728.633580525469 2918.549178034182 3131.5985642856886 3265.2282804023225 3183.4077871862305 1.0170679509376737 1.0568682682848072 0.9639443378841993 0.9474554660873555 1.0236451969387763 1.0591996205064247 0.8571423339192337 0.9168002886032539 0.9837252320896233 1.025702171599075 1.0 11.63635625937672 SDPVVSYR ddPTM_A549_PD325901_60min_R1 2 SDPVVSYR 8 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 142.19 0.0028244 25766000.0 9510.3 9724.2 9416.5 9191.6 11622.8 10009.400000000001 10267.7 10505.2 10337.9 11765.8 12399.400000000001 False True 10475.778654887168 10543.692461082874 10055.560316014493 9759.344256361808 10806.454624483247 9927.886765005998 10658.442942201034 10295.665544830024 9903.434014015638 11022.905380036014 10874.352406272683 0.9633473574798253 0.9695926770775726 0.9247042895367374 0.8974644090743554 0.9937561539986262 0.9129634937414083 0.98014507383933 0.9467842461028895 0.9107148310094322 1.0136608570527512 1.0 13.408641867124363 -11.021627834640412 1.3129525196006027 0.999965607815526 0.9410427470613529 0.3824897960005986 0.029877007719019258 0.3992006138377624 1.2269767112617582 0.020781243260953534 0.004703215373238824 9.514197563564513e-12 11.021627834640412 -0.05892286075417308 SDQDS(ph)DSDQPSR ddPTM_A549_MK2206_60min_R1 2 SDQDSDSDQPSR 12 0 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 S(0.009)DQDS(0.969)DS(0.022)DQPSR;S(0.008)DQDS(0.98)DS(0.012)DQPSR 85.845 0.00036174 20277300.0 684.67 1041.2 432.43 759.89 867.3399999999999 557.96 702.56 113.07 760.4000000000001 1086.03 1490.7 True False 800.2255574256369 1094.1926326752284 493.7550764011776 946.0630841127587 739.7554349583503 617.0029568561273 830.2060579160593 129.09801876235232 588.1706141092822 840.6950687194078 1120.5180487729965 0.7141567762356972 0.976506031182099 0.4406489274687323 0.8443086527242719 0.6601905571877279 0.5506408018431881 0.7409127044630488 0.11521279724473767 0.5249095405052583 0.7502735628756682 1.0 10.12995017194465 -10.775950240913692 1.1270671541732376 0.991402706531144 0.6154828504288853 0.13298682807567552 0.22498199367363095 0.4747123102755291 1.10754699968685 0.13228327345269364 0.0366953623199218 1.675134792814037e-11 10.775950240913692 -0.37591985610225875 SDQDS(ph)DSDQPSR ddPTM_A549_PD325901_60min_R1 2 SDQDSDSDQPSR 12 0 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 SDQDS(0.745)DS(0.255)DQPSR;SDQDS(0.982)DS(0.018)DQPSR 139.89 4.829e-09 49909000.0 1468.28 1734.4499999999998 1606.87 1845.19 1779.2 1467.99 1616.68 2044.58 1968.63 1744.7599999999998 1603.85 True False 1617.3387047093927 1880.6181885528038 1715.9218610942721 1959.1631955694602 1654.2351299067861 1456.0351761505342 1678.2036420812422 2003.7992479580194 1885.8953271952355 1634.5955558373948 1406.586617642824 1.1498322850673426 1.337008446521671 1.2199190860850333 1.3928493069645802 1.1760634639614123 1.0351550042403908 1.1931036603302807 1.4245829036223963 1.3407601803830917 1.1621008868808032 1.0 10.45798268125076 -10.87203943306239 1.1380414906495333 1.0009683120566242 1.2585988934017405 0.1963739442571888 0.1188941831439338 0.39417533451524606 0.9119945632672105 0.0791123273546573 0.01943332139359205 1.3426430463244806e-11 10.87203943306239 0.2576305813451163 SDQDS(ph)DSDQPSRK ddPTM_A549_MK2206_60min_R1 3 SDQDSDSDQPSRK 13 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 S(0.021)DQDS(0.634)DS(0.314)DQPS(0.03)RK;S(0.005)DQDS(0.948)DS(0.046)DQPS(0.001)RK;S(0.004)DQDS(0.974)DS(0.022)DQPSRK 50.563 0.022514 3267000.0 366.5 666.59 468.72 249.18 507.31 252.79 294.43 153.57 597.52 732.6 850.23 True False 428.35623993529094 700.5165837639069 535.1915440898182 310.22911118611506 432.6853710294931 279.54007001157856 347.92411983634923 175.33901778840047 462.1826740433692 567.1051511872031 639.0944258457537 0.6702550086685864 1.0961081108427277 0.8374217055352434 0.48541983569262 0.6770288607303897 0.4374002631014121 0.5444017437265541 0.2743554171300483 0.7231837039287801 0.8873573735785871 1.0 9.3198852940849 -9.967888947277624 1.09044314074364 0.9602023761867889 0.64089195698911 0.23885659336139908 0.20759520670217244 0.4476639442098248 1.0755579124913879 0.0744148142222402 0.042176396963601696 1.0767405099622799e-10 9.967888947277624 -0.319310419197679 SDQDS(ph)DSDQPSRK ddPTM_A549_PD325901_60min_R1 4 SDQDSDSDQPSRK 13 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 SDQDS(0.596)DS(0.404)DQPSRK;S(0.007)DQDS(0.796)DS(0.193)DQPS(0.004)RK;SDQDS(0.951)DS(0.049)DQPSRK;SDQDS(0.69)DS(0.309)DQPS(0.001)RK 113.86 8.7411e-06 60202000.0 7458.96 8003.209999999999 8511.529999999999 7229.0 10568.15 9535.61 8291.45 7610.53 9219.59 9449.43 10223.8 True False 8216.188128203865 8677.66859396794 9089.173609787802 7675.518911749808 9825.879602138268 9457.955153681414 8606.98566700553 7458.732008804711 8832.122694287866 8852.791377150186 8966.33741400798 0.916337156280538 0.9678052691181287 1.0136997070384521 0.8560372599583923 1.095863243645888 1.0548292705230329 0.9599221253439516 0.8318593941325519 0.9850312659982623 0.9873364082105139 1.0 13.130303075413254 -8.434144278138074 0.004736873545488121 1.9544486165999657 2.6855283493289675e-07 0.007426911958278937 0.07445178195120036 15220.580691717116 56.44358816743917 11620.004754150237 11665.627123990105 3.6800669683801773e-09 8.434144278138074 -1.9544483480471309 SDQDYILK ddPTM_A549_PD325901_60min_R1 1 SDQDYILK 8 0 Q9UQ80;Q9UQ80-2;F8VR77;F8VZ69;H0YIN7;F8W0A3 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 89.24700000000001 0.0073822 4474300.0 4293.4 5170.5 3880.8 4693.8 5850.7 5464.0 4370.5 4631.2 6157.4 5776.4 6383.5 False True 4729.262807365968 5606.236180871327 4144.174425146188 4983.725365606756 5439.767015819264 5419.502995583424 4536.821769129365 4538.827082893881 5898.625890935291 5411.677118193408 5598.369968340536 0.8447571050342377 1.0014050897985083 0.7402466161725644 0.8902100778959465 0.9716697979200748 0.96805016928702 0.8103826282981733 0.8107408243044854 1.0536327402963255 0.9666522842893738 1.0 12.450791115240886 -8.772582169391027 24.99986241909524 1.0253265811059964 0.8831450414787807 0.33934385763778796 0.07769203534005485 149.17649179176894 334690.03351200203 0.0131279467718691 0.014038903804738876 1.688176422887999e-09 8.772582169391027 -0.1421815396272157 SDQRENS(ph)PVQSIR ddPTM_A549_MK2206_60min_R1 2 SDQRENSPVQSIR 13 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 S(0.001)DQRENS(0.976)PVQS(0.022)IR;SDQRENS(0.992)PVQS(0.008)IR 88.133 5.3518999999999994e-05 13651800.0 1438.3600000000001 1154.91 1106.9499999999998 1217.5900000000001 1497.6999999999998 1304.73 1193.66 898.9 1814.05 1800.42 2024.16 True False 1681.1200034742844 1213.6899859805492 1263.9321550824031 1515.8996046596917 1277.3903139911924 1442.795662590321 1410.5325710146947 1026.3218277657957 1403.1705714425866 1393.7038715540052 1521.5052080259934 1.10490584889642 0.7976903263809364 0.8307116849913603 0.9963157514435494 0.8395569776908509 0.9482686322593726 0.9270639124822484 0.674543749408094 0.9222252832529344 0.9160033526025204 1.0 10.57128355678631 -9.757439048834595 1.4073611495669607 0.9834579801073833 0.8885646275780158 0.0375721448881462 0.108491581770863 0.5422251165298693 2.1647887865796953 0.026732554143906937 0.018738209612012814 1.7480785797195675e-10 9.757439048834595 -0.09489335252936748 SDQRENS(ph)PVQSIR ddPTM_A549_PD325901_60min_R1 2 SDQRENSPVQSIR 13 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SDQRENS(0.999)PVQSIR;SDQRENS(1)PVQSIR 119.8 3.2220999999999996e-06 16932500.0 2157.23 2512.25 2188.2599999999998 2243.75 2705.43 2345.2200000000003 2222.7200000000003 2598.3 2598.34 2517.29 2733.66 True False 2376.2304015312084 2723.9661242421407 2336.768482676352 2382.3413415740265 2515.4099300268176 2326.121305875213 2307.306825919054 2546.4748681730835 2489.1408057707486 2358.3478797966022 2397.4371500985008 0.9911544089627454 1.1361991800828748 0.9746943658482743 0.9937033558840723 1.0492078717990458 0.9702532997703994 0.9624055528730988 1.0621654328116419 1.0382507027007903 0.9836953930991298 1.0 11.22727727949685 -5.790045020981375 24.99962628994927 1.012725636109772 1.0636771348814016 0.18899830079093627 0.04481753297028532 225.5453061910512 197112.95668541064 0.005681624512738342 0.01766937245032832 1.6216419817120631e-06 5.790045020981375 0.05095149877162952 SDREETES(ph)SEGEEAAAGGGAK ddPTM_A549_MK2206_60min_R1 1 SDREETESSEGEEAAAGGGAK 21 1 H0YLQ6;Q96G23 H0YLQ6 CERS2 Ceramide synthase 2 1 S(0.019)DREET(0.114)ES(0.433)S(0.433)EGEEAAAGGGAK 118.67 2.9893e-15 4473000.0 596.89 1011.0 545.46 490.01 811.54 780.94 758.24 673.81 1100.7 1054.2 913.67 True False 697.630439440589 1062.4555816698573 622.8144300205497 610.0624719973852 692.163541040537 863.5785524539823 896.0023931824659 769.3246309565806 851.3932074567163 816.0554878263026 686.7805229908254 1.0157982296913632 1.54700890037333 0.906860939078888 0.8882932051431152 1.0078380470463393 1.2574301738978098 1.3046415313010202 1.1201899372543183 1.2396874677648508 1.188233300898669 1.0 9.423705315045186 -7.229924456355907 24.73682781881813 1.141374854472429 1.0799756446478865 0.05774403923835869 0.18255138566307724 2498.332689735257 1961000.9027221703 0.028700014682536273 0.049706547705901834 5.889460910678798e-08 7.229924456355907 -0.06139920982454239 SDRGS(ph)GQGDSLYPVGYLDK ddPTM_A549_MK2206_60min_R1 1 SDRGSGQGDSLYPVGYLDK 19 1 S4R329;H0YK61;H0YNK0;H0YNK8;H0YLP8;Q5J8M3-3;Q5J8M3-2;Q5J8M3 S4R329 EMC4 ER membrane protein complex subunit 4 1 S(0.306)DRGS(0.661)GQGDS(0.03)LY(0.002)PVGYLDK 79.762 7.8955e-05 5023000.0 1354.2 1633.2 1760.3 1433.9 1720.3 1481.3 1214.2 1871.5 2355.4 1985.7 2273.3 True False 1582.7558529887353 1716.3229040387841 2009.937009432726 1785.205564370218 1467.2461488676295 1638.0501827926407 1434.8044231406282 2136.790856228376 1821.9056608008968 1537.1289908714562 1708.7768701117948 0.9262507473460742 1.0044160440482177 1.1762431038180123 1.0447271352949803 0.8586528613133888 0.9586097585025675 0.8396675120296764 1.2504797399841787 1.0662045423646802 0.8995492727911815 1.0 10.738748308709805 -11.436574799617826 2.290128483596697 0.9996800360641928 1.025487840676756 0.0017902120958761536 0.12164961101136983 2.611826209316461 24.829615065567058 0.09625872254829144 0.017189438460223208 3.659529061515109e-12 11.436574799617826 0.025807804612563268 SDRGS(ph)GQGDSLYPVGYLDK ddPTM_A549_PD325901_60min_R1 2 SDRGSGQGDSLYPVGYLDK 19 1 S4R329;H0YK61;H0YNK0;H0YNK8;H0YLP8;Q5J8M3-3;Q5J8M3-2;Q5J8M3 S4R329 EMC4 ER membrane protein complex subunit 4 1 S(0.169)DRGS(0.809)GQGDS(0.022)LYPVGYLDK;S(0.405)DRGS(0.577)GQGDS(0.018)LYPVGYLDK 117.4 1.5035e-14 18206700.0 5550.1 5174.5 5413.9 5618.4 6355.4 5350.5 5180.700000000001 5370.4 6336.299999999999 6456.1 7259.3 True False 6113.542066232327 5610.573274909326 5781.319810425409 5965.4358076878025 5909.018628939744 5306.927301952623 5377.854373487817 5263.2831590027035 6070.0073460767935 6048.460744195084 6366.452120494159 0.960274569026021 0.8812715730396221 0.9080913043883329 0.9370110219606537 0.9281493863620057 0.8335768810495198 0.8447176342025787 0.8267215490492327 0.9534364244312645 0.9500520273645924 1.0 12.636273899825264 -8.959754486920268 5.5365050124977175 0.9800559562378584 0.8894681469182025 0.40527891354849066 0.04225719297515081 0.1239951270573344 8.484788935174134 0.007978561676277755 0.00830518250229252 1.0970982266884666e-09 8.959754486920268 -0.09058780931965582 SDS(ph)APPTPVNR ddPTM_A549_MK2206_60min_R1 2 SDSAPPTPVNR 11 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 SDS(1)APPTPVNR;S(0.006)DS(0.972)APPT(0.021)PVNR 145.23 2.2169e-11 15440000.0 1725.6399999999999 1635.23 2007.65 1545.5900000000001 2221.92 1893.6100000000001 1414.51 1204.1999999999998 1994.73 2328.1000000000004 2076.3999999999996 True False 2016.8858441526213 1718.4562223679536 2292.364958806799 1924.2596193841714 1895.0785113596264 2093.9905533234128 1671.5081572859895 1374.899037707833 1542.926839929258 1802.180593064329 1560.7725742753391 1.292235574480833 1.1010292278910823 1.4687373398210406 1.2328891800764745 1.2141926008915835 1.34163720444386 1.0709492112020642 0.8809092755529699 0.9885660892302859 1.1546721301795522 1.0 10.608044617065211 -7.909329720076865 4.86667971952472 0.9854408652711626 1.2703767027813972 0.6023800202588261 0.10384787464174408 0.0834013945587757 3.4243136842715742 0.01326234227969722 0.018457294646829322 1.2321690048058022e-08 7.909329720076865 0.28493583751023466 SDS(ph)APPTPVNR ddPTM_A549_PD325901_60min_R1 2 SDSAPPTPVNR 11 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 S(0.439)DS(0.561)APPTPVNR;S(0.009)DS(0.991)APPT(0.001)PVNR 117.79 1.6788e-05 19615000.0 1310.81 1250.48 1385.84 1714.0500000000002 1545.8899999999999 1449.97 1507.76 1214.56 1629.3600000000001 1475.72 1675.34 True False 1443.88246623268 1355.8623381599418 1479.8914361329075 1819.9229756100092 1437.3120194309809 1438.1619250560216 1565.138631877931 1190.334647996112 1560.8836654520283 1382.5427873520491 1469.283800855272 0.9827117575189995 0.9228049321517685 1.0072195958816539 1.2386463218002062 0.9782398870758119 0.9788183359939487 1.0652391532302077 0.8101461727837853 1.0623432073119135 0.9409637447491555 1.0 10.520897372551692 SDS(ph)DAEAQGK ddPTM_A549_MK2206_60min_R1 2 SDSDAEAQGK 10 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.01)DS(0.99)DAEAQGK;S(0.038)DS(0.962)DAEAQGK 146.07 3.8822999999999996e-08 43279000.0 9407.8 7768.1 6420.799999999999 4895.200000000001 1731.98 587.13 741.49 1423.5 1302.73 11401.8 10805.9 True False 10995.606641373082 8163.463109762234 7331.365988846015 6094.524219753878 1477.208036340033 649.2597068946488 876.2091349979768 1625.2854842859167 1007.6637350323311 8826.125461105992 8122.496802331871 1.3537224955528917 1.0050435609181898 0.902600046175613 0.7503264535609561 0.18186625027860207 0.07993351338818062 0.10787435887280715 0.20009678351850096 0.12405837263525214 1.086627138907844 1.0 12.987707555256137 -6.072205388872455 1.524548234647988 0.4526519108377977 1.2322374163424727 0.4432178387233039 0.3422162078882216 0.39424200862750347 1.65447622712624 0.05966793050828359 0.2879469019796259 8.468268335439924e-07 6.072205388872455 0.779585505504675 SDS(ph)DAEAQGK ddPTM_A549_PD325901_60min_R1 1 SDSDAEAQGK 10 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.003)DS(0.997)DAEAQGK 156.36 1.4872e-08 43099000.0 2755.3 3267.3 3056.2 2400.4 3234.1 2773.7 2041.3 2557.5 2800.8 3464.6 3754.0 True False 3035.016027655344 3542.6468375903487 3263.6121104235635 2548.6672562960644 3006.947973039307 2751.111906817304 2118.9827885422205 2506.4886561800627 2683.0921160443613 3245.844564727666 3292.2817985666748 0.9218579129455644 1.0760460538744505 0.9912918486638681 0.7741339934527021 0.9133325022020926 0.8356246746602997 0.6436213295789988 0.7613226356478008 0.8149642953444842 0.9858951217786929 1.0 11.684872111307149 -6.125267338531922 7.608500983990157 0.8680765626004573 1.0072640910681803 0.2802322863564326 0.10438709657679014 0.32901589172809625 18.866724793961023 0.01677036149497713 0.044709400252091205 7.494327392132856e-07 6.125267338531922 0.13918752846772298 SDS(ph)DSSTLAK ddPTM_A549_MK2206_60min_R1 1 SDSDSSTLAK 10 0 Q6AWC2-7;Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6 Q6AWC2-7 WWC2 Protein WWC2 1 S(0.006)DS(0.992)DS(0.002)STLAK 211.37 2.7668e-26 44191000.0 5081.3 6049.3 5263.5 5276.6 6978.0 5792.5 4780.5 5564.6 8402.4 7924.7 8045.9 True False 5938.899214142415 6357.183531350607 6009.943446656339 6569.367236875575 5951.545443700703 6405.458505249693 5649.054970205706 6353.399090872784 6499.269815875628 6134.504766056816 6047.8809744567325 0.9819801744156998 1.0511423022708641 0.9937271371641369 1.0862262773724125 0.9840711926767568 1.0591244325579805 0.93405524911362 1.05051655575009 1.0746358672277678 1.0143229987438476 1.0 12.562214031487814 SDS(ph)DSSTLAK ddPTM_A549_PD325901_60min_R1 2 SDSDSSTLAK 10 0 Q6AWC2-7;Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6 Q6AWC2-7 WWC2 Protein WWC2 1 SDS(0.999)DS(0.001)STLAK;S(0.053)DS(0.774)DS(0.172)STLAK 244.74 6.0926e-46 93344000.0 26320.0 26961.0 26335.0 25879.0 31024.0 26682.0 25168.0 26706.0 25260.0 29226.0 29123.0 True False 28991.98702424006 29233.09808963774 28122.251465219753 27477.487054526675 28844.981266989736 26464.71063838891 26125.782012458058 26173.327879548287 24198.410044016215 27380.665372259646 25541.055625907626 1.1351131076521355 1.1445532446977282 1.1010606561106224 1.0758164210979138 1.129357442757016 1.0361635410066754 1.022893587293914 1.0247551339655403 0.9474318680654101 1.0720255957034919 1.0 14.640530533203611 -7.592894240656642 0.9318384633234083 0.9762002612265741 1.1242310299607663 0.59180740305278 0.038073619991134566 0.15282623799834152 0.26663100627351227 0.005243977552373086 0.010080922345392651 2.5533230118913984e-08 7.592894240656642 0.1480307687341922 SDS(ph)DSSTLPR ddPTM_A549_MK2206_60min_R1 1 SDSDSSTLPR 10 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.184)DS(0.556)DS(0.259)STLPR 186.24 4.0022e-14 72404000.0 2438.4 2964.6 2471.6 2536.1 3589.8 2866.6 2180.9 2474.4 3867.6 4415.9 4192.2 True False 2849.942306843695 3115.4854771695946 2822.110045170665 3157.444613849857 3061.745175379304 3169.941709304922 2577.141299973147 2825.1537775321876 2991.5947752880843 3418.345123024256 3151.161041166 0.9044102378814485 0.988678597021749 0.8955778547345906 1.0019940500030846 0.9716244696419545 1.0059599201353329 0.8178386525810649 0.8965437629575471 0.9493627066997272 1.0847890915024108 1.0 11.621667770326562 -10.090421106410977 1.0600197027925482 0.9938959018354793 0.9386126468023996 0.24863485680921227 0.060409554667058274 0.6590611588023211 1.4852281531621894 0.019735759401654125 0.010123900842742948 8.120427505758275e-11 10.090421106410977 -0.055283255033079626 SDS(ph)DSSTLPR ddPTM_A549_PD325901_60min_R1 2 SDSDSSTLPR 10 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.202)DS(0.604)DS(0.193)S(0.001)TLPR;S(0.127)DS(0.765)DS(0.108)STLPR 206.24 4.0704e-20 192735000.0 8014.799999999999 8201.2 8222.0 8934.9 9458.4 9192.8 8527.9 9606.8 10850.5 10226.900000000001 10529.8 True False 8828.45659581608 8892.343906113902 8779.994362902484 9486.788480369805 8794.074613708604 9117.93688466312 8852.433901145941 9415.184837611188 10394.491218630155 9581.171788666332 9234.701353901803 0.9560088905404529 0.9629270688170929 0.9507610507829581 1.0272978103792703 0.9522857617905504 0.9873559019654331 0.9586053259216285 1.01954405202645 1.1255904030116062 1.0375183150474205 1.0 13.172849590513914 -8.506835782914086 6.808596229422241 1.0600215078142035 0.9728120669269784 0.5349750634943499 0.03449539478273261 0.1187345493380699 25.71415369846689 0.00794580612796641 0.009369288450523254 3.112893173636552e-09 8.506835782914086 -0.08720944088722504 SDS(ph)DSSTLSK ddPTM_A549_MK2206_60min_R1 1 SDSDSSTLSK 10 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.003)DS(0.872)DS(0.096)S(0.023)T(0.007)LSK 138.45 2.976e-07 123640000.0 4129.8 4904.5 4447.3 5100.8 5820.0 4936.0 4530.1 4709.0 6522.7 6351.0 6177.3 True False 4826.809276083947 5154.118101186758 5077.99401354892 6350.496228983618 4963.8857097073815 5458.324243748376 5353.160531435807 5376.5151707076775 5045.318864611536 4916.30468903894 4643.305925193152 1.0395199786202245 1.1100104503608295 1.0936160777168016 1.3676669879810794 1.0690412800015743 1.1755254406420186 1.152876984131328 1.1579067279492306 1.0865790335366845 1.0587940506707905 1.0 12.180936620966033 -9.494943454111757 0.7978830933291651 1.0128035610218646 1.150041455864936 0.21500221416887688 0.08279862384209455 0.46701168842500557 0.6382609211294261 0.026825519761776544 0.017686735322882043 3.199311638450453e-10 9.494943454111757 0.13723789484307125 SDS(ph)DSSTLSK ddPTM_A549_PD325901_60min_R1 2 SDSDSSTLSK 10 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.002)DS(0.952)DS(0.046)STLSK;S(0.002)DS(0.945)DS(0.051)S(0.001)TLSK 227.72 3.8595e-35 273360000.0 32526.0 31955.0 33493.0 31059.0 36658.0 31853.0 33781.0 32404.0 32191.0 34734.0 35315.0 True False 35828.01557562433 34647.95999608227 35766.036389770474 32977.443889893104 34083.26854323459 31593.599728828496 35066.55444067247 31757.67679955378 30838.12421721797 32540.889312258485 30971.478880229646 1.1568067419116628 1.1187053782633372 1.1548055721873 1.0647681377250586 1.1004727502693237 1.0200868951400308 1.1322208595940466 1.0253845779326345 0.9956942752547473 1.050672763741697 1.0 14.918652652527598 -7.211950668624051 0.40011561596294104 0.9907268866530774 1.1653154278185898 0.5552068637166079 0.03866924873989285 0.6039963238708174 0.16920686292822437 0.011215811195486064 0.041124371926424375 6.138317261609511e-08 7.211950668624051 0.17458854116551237 SDS(ph)DTEGLLFSR ddPTM_A549_MK2206_60min_R1 1 SDSDTEGLLFSR 12 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.002)DS(0.998)DTEGLLFSR 112.51 4.9047e-05 7127900.0 596.33 535.52 494.55 407.08 999.12 670.11 631.42 1031.3 986.4 831.34 990.49 True False 696.9759251312745 562.7756806091415 564.6846264926169 506.81461827451534 852.1507715262612 741.0205954169826 746.1408407671352 1177.48993322379 762.9819749571217 643.5397166092943 744.5239968666833 0.9361362804482943 0.7558865570184085 0.7584505386919462 0.6807230128342889 1.144557831732118 0.9952944411940451 1.002171647800818 1.581533890350394 1.0247916496555094 0.8643639685458364 1.0 9.540174539055748 -6.763326914487206 24.9900063747441 1.0614600648109112 0.7791375781573785 0.3884567505624881 0.18204557540813887 41.556413931228555 550197.7462522675 0.025386958911886214 0.049768085900000925 1.7245392590685963e-07 6.763326914487206 -0.28232248665353266 SDS(ph)DTEGLLFSR ddPTM_A549_PD325901_60min_R1 2 SDSDTEGLLFSR 12 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 S(0.008)DS(0.99)DT(0.002)EGLLFSR;S(0.224)DS(0.774)DT(0.002)EGLLFSR 162.48 4.0436e-14 31547000.0 4553.3 3753.7 3842.8999999999996 4220.0 4461.0 4402.4 4284.0 3618.8999999999996 4269.1 4717.9 4634.8 True False 5015.547664037703 4070.037472611296 4103.702303234973 4480.659815684629 4147.674749614532 4366.548314011065 4447.029964294753 3546.718200527872 4089.6845731951557 4420.010988838148 4064.7489824179106 1.2339132590308715 1.00130106193919 1.009583204519038 1.102321406577809 1.0204012025232843 1.074247962887398 1.0940478695069242 0.8725552834551942 1.0061345954904237 1.0874007246097912 1.0 11.988950546432841 SDS(ph)DYDLSPK ddPTM_A549_MK2206_60min_R1 2 SDSDYDLSPK 10 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;E9PMG3;Q07343-3;Q07343;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q07343-3;Q08499-6 PDE4D;PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 S(0.001)DS(0.999)DYDLSPK;S(0.01)DS(0.99)DYDLSPK 239.16 1.6212e-45 76199000.0 18349.5 18674.0 17392.7 16357.400000000001 24060.0 19972.9 19320.0 19593.7 27876.0 27377.0 26044.0 True False 21446.44699779707 19624.426836897037 19859.246392069843 20364.96373431159 20520.80587208928 22086.419021061978 22830.193917869317 22371.16697818964 21562.130508824754 21192.51668584774 19576.556022166704 1.0955168505386275 1.0024453133981344 1.014440250347561 1.0402730547320052 1.0482337061152838 1.1282075864648171 1.1662007296900687 1.1427529414703268 1.1014261387145812 1.0825457073170208 1.0 14.256839362736041 -4.875122576509597 19.04713837054041 1.0619909283439193 9.112796217006888 0.0 0.055640906884241344 1601.8682618654655 240236.68894534308 0.00885652603167597 9431.993169994668 1.3331451083919546e-05 4.875122576509597 8.05080528866297 SDS(ph)DYDLSPK ddPTM_A549_PD325901_60min_R1 1 SDSDYDLSPK 10 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;E9PMG3;Q07343-3;Q07343;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q07343-3;Q08499-6 PDE4D;PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 S(0.004)DS(0.994)DY(0.001)DLSPK 92.24700000000001 0.00062407 97273000.0 8263.2 9258.3 9570.9 9672.6 10646.0 9625.6 8659.0 8801.0 10575.0 10643.0 10530.0 True False 9102.073980953668 10038.529433006674 10220.43882849712 10270.05453393155 9898.261686706182 9547.212304957515 8988.522983386612 8625.457150749067 10130.569525553108 9970.999163654253 9234.876755169706 0.9856194318844922 1.0870236494912704 1.1067217353794887 1.1120943794060218 1.071834735765706 1.033821301363114 0.9733235452606139 0.9340089076901341 1.0969902245725143 1.0797111242521416 1.0 13.172876992389353 -7.247256961633359 5.224762550844289 1.0306973047102739 1.0778527443630237 0.18049132433660853 0.053081449952489895 0.31224807004402905 27.446892953430723 0.008846374365332225 0.015057360458642123 5.659043579208263e-08 7.247256961633359 0.04715543965274982 SDS(ph)EATISR ddPTM_A549_PD325901_60min_R1 2 SDSEATISR 9 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.003)DS(0.965)EAT(0.03)IS(0.003)R;S(0.003)DS(0.996)EAT(0.001)ISR 72.2 0.0027579 2465400.0 839.48 563.77 741.72 747.1 939.51 1131.56 674.88 828.25 737.97 693.0 907.8299999999999 True False 924.7033916074876 611.2808764509874 792.0575795246932 793.246670212793 873.5220587335454 1122.3449505275228 700.5629277085064 811.7299040004445 706.9556872598034 649.2438617318803 796.17266520852 1.161435743797239 0.7677742569708684 0.9948314155161945 0.9963249240728947 1.0971515312005433 1.4096753123690542 0.8799133131819176 1.0195400312918932 0.8879426764477648 0.8154561065743715 1.0 9.636937530376214 SDS(ph)EEKS(ph)DSEKKEDEEGK ddPTM_A549_MK2206_60min_R1 1 SDSEEKSDSEKKEDEEGK 18 3 Q99442 Q99442 SEC62 Translocation protein SEC62 2 S(0.15)DS(0.858)EEKS(0.964)DS(0.028)EKKEDEEGK 47.38 0.0067703 34461000.0 6586.3 7624.7 6572.1 5313.7 3206.0 2488.4 2065.1 1949.3 2812.5 9230.1 8997.7 True False 7697.906420425128 8012.764662273154 7504.122603927063 6615.5567385410595 2734.401646962518 2751.720836333763 2440.301938912625 2225.6192444808835 2175.4732406396033 7145.013999417145 6763.3227661130895 1.1381840977625186 1.1847378780176305 1.1095319362142042 0.9781518592736109 0.4042985587887284 0.40685931035569795 0.3608140589030437 0.32907186621820156 0.3216574627399983 1.05643546027649 1.0 12.723516489814218 -6.602553252290595 4.772024532959009 0.5850301965841788 1.1341955751301658 0.5445934817048005 0.2430301634862954 0.1557950565084557 6.459668198598783 0.04256345196617391 0.09097534779638475 2.497162173522944e-07 6.602553252290595 0.549165378545987 SDS(ph)EEKSDSEKKEDEEGK ddPTM_A549_PD325901_60min_R1 1 SDSEEKSDSEKKEDEEGK 18 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 S(0.104)DS(0.754)EEKS(0.123)DS(0.02)EKKEDEEGK 42.041000000000004 0.023697 10781000.0 5253.2 5445.9 6430.1 5775.5 7306.5 6615.8 5725.9 6002.3 6354.0 7035.5 7785.6 True False 5786.500996798558 5904.84510538771 6866.4852533324265 6132.239517887816 6793.31664605662 6561.9231182614985 5943.802257832708 5882.579417786745 6086.963476630206 6591.277329314058 6828.020556984741 0.8474639097094168 0.8647960351184552 1.0056333597748675 0.8980991587107666 0.994917427292655 0.9610286119524 0.8705015177132822 0.8615351065059617 0.8914682411732828 0.9653276926021399 1.0 12.737251686527342 -10.791364774721416 1.0737700306722684 0.9992990614877454 0.9121200683316496 0.21057285005898307 0.05249823902359109 0.5512086195070691 1.1426035154417382 0.03534248704029866 0.009166854407258382 1.6167215426298e-11 10.791364774721416 -0.08717899315609579 SDS(ph)FPERR ddPTM_A549_PD325901_60min_R1 1 SDSFPERR 8 1 E9PD43;A0A0A0MSN9;A0A0A0MT02;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.07)DS(0.93)FPERR 63.816 0.0040628 3131100.0 723.74 633.62 450.19 670.59 883.86 585.74 594.99 779.9 859.5 624.32 603.07 True False 797.2135520107722 687.0173810895836 480.7426006123894 712.01082127961 821.7807227514681 580.9699276414781 617.6326700410212 764.3442826802858 823.3782039917634 584.9003286528822 528.8962131757072 1.50731567394665 1.2989644546033954 0.90895451439483 1.3462203047444952 1.5537655636011527 1.0984573403411213 1.167776691635783 1.4451687564387217 1.5567859694964858 1.1058886679125637 1.0 9.046840835692478 -11.09177998629988 1.446984628847755 1.0014036139257854 1.340054507923637 0.21052346094669316 0.1943800031898913 0.45454509508701274 1.7119656297781833 0.14624009031404273 0.03258744496638909 8.095058912185177e-12 11.09177998629988 0.33865089399785164 SDS(ph)GGSSSEPFDR ddPTM_A549_MK2206_60min_R1 2 SDSGGSSSEPFDR 13 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 S(0.003)DS(0.655)GGS(0.334)S(0.008)SEPFDR;S(0.001)DS(0.974)GGS(0.021)S(0.004)S(0.001)EPFDR 190.03 1.5537e-25 43219000.0 1979.4099999999999 2350.6000000000004 1863.2 1223.22 2938.2 2405.4 1882.02 2020.3600000000001 2596.5 3487.3 3594.4 True False 2313.486016071801 2470.2354997756343 2127.42977672843 1522.9089549124315 2505.9946722100053 2659.937831424707 2223.958672738531 2306.7522170930056 2008.3968957584823 2699.516507964965 2701.811279606667 0.8562722472639173 0.9142886915977544 0.787408725689436 0.5636622240818161 0.9275239507382732 0.9845017124260226 0.8231362010829629 0.8537799196059412 0.7433520286623673 0.9991506543558305 1.0 11.399711191196822 SDS(ph)GGSSSEPFDR ddPTM_A549_PD325901_60min_R1 2 SDSGGSSSEPFDR 13 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 S(0.125)DS(0.871)GGS(0.001)S(0.002)S(0.001)EPFDR;S(0.01)DS(0.61)GGS(0.086)S(0.228)S(0.067)EPFDR 157.33 2.067e-18 65551000.0 2844.3 2956.7 3380.6 2750.8999999999996 3227.6 3725.9 3342.6 3352.3 4110.9 3731.9 4381.3 True False 3133.0512421370076 3205.8714855395538 3610.0278451992363 2920.8168452528075 3000.9045106155245 3695.5575057182064 3469.8044721409024 3285.4357466715232 3938.133169039833 3496.2671971099617 3842.42787534901 0.8153832274216548 0.8343348501364811 0.9395173994961026 0.7601487757236063 0.7809917604095433 0.9617766749577666 0.9030239694026106 0.8550416177618182 1.0249075055656394 0.9099109496732958 1.0 11.907802464590397 -8.37031988586807 0.9444967946588657 1.0138694515796833 0.8395538350855115 0.3254169272414227 0.06876211126801682 0.2587980802050227 0.45361263008502467 0.012972954374135148 0.016373517364706137 4.2626543118801355e-09 8.37031988586807 -0.17431561649417182 SDS(ph)IKFQHR ddPTM_A549_MK2206_60min_R1 3 SDSIKFQHR 9 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.177)DS(0.823)IKFQHR;S(0.32)DS(0.68)IKFQHR;S(0.231)DS(0.769)IKFQHR 70.41199999999999 0.00099492 31190200.0 7563.57 8935.2 7852.86 6933.24 11013.6 8909.27 7317.09 7715.12 11495.86 12027.86 12547.79 True False 8840.115704467584 9389.963514675086 8966.513630570857 8631.884111244974 9393.514029627697 9852.043037905205 8646.510539052924 8808.761886564072 8892.06606511616 9310.758072288441 9431.827441613545 0.9372643593398128 0.9955614193328269 0.9506655720831249 0.9151868145043458 0.9959378591028067 1.0445529351435814 0.9167375667735633 0.9339401023919833 0.9427723439769541 0.9871637421194814 1.0 13.203321608640737 -8.154065032780052 0.003560742750918781 1.9296052635234429 5.9453210786134154e-08 0.05423321706116646 0.03843115669476649 23960.344706913227 55.62582671989138 15014.175147221837 15127.933417794125 7.01350267905561e-09 8.154065032780052 -1.929605204070232 SDS(ph)IKFQHR ddPTM_A549_PD325901_60min_R1 2 SDSIKFQHR 9 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.092)DS(0.908)IKFQHR;S(0.084)DS(0.916)IKFQHR 83.314 0.00040239 39786000.0 9618.900000000001 9879.2 11407.7 11338.6 12878.9 13204.099999999999 12410.9 13668.3 12558.099999999999 13147.7 14143.0 True False 10595.403646940083 10711.754855055413 12181.895122072812 12038.959570171024 11974.330493792999 13096.570187405408 12883.203591005062 13395.675033926085 12030.326728969116 12317.551978199484 12403.500659863741 0.8542268781607402 0.8636073918806957 0.9821336295399236 0.9706098222034745 0.9653992709123251 1.0558769291466528 1.038674801920524 1.0799914799273485 0.9699138218211112 0.9930706109491834 1.0 13.598459731763949 -5.7774113264473845 3.520237147460091 0.9982430878434845 0.8532399816338155 0.7103289294574316 0.03611854722159528 0.1018379125804635 2.61244357027109 0.005538142555133299 0.022306987304487092 1.6695086500191107e-06 5.7774113264473845 -0.14500310620966894 SDS(ph)LILDHQWELEK ddPTM_A549_MK2206_60min_R1 2 SDSLILDHQWELEK 14 0 H7C3Y8;A0A3B3ITK3;A0A3F2YNW9;A0A3B3IUA1;A0A3B3IU40;A0A3B3IT28;A0A3B3ITE5;A0A3B3ITF7;A0A3B3ITW6;Q12756;Q12756-3;Q12756-2 H7C3Y8 KIF1A Kinesin-like protein KIF1A 1 S(0.134)DS(0.866)LILDHQWELEK;S(0.129)DS(0.871)LILDHQWELEK 120.63 6.139999999999999e-16 1942300.0 414.77 598.16 257.57 391.55 690.4 534.62 470.04 478.1 874.04 701.78 598.2 True False 484.7730358470961 628.6037890520687 294.0972990510633 487.4797675773474 588.8430745673494 591.1931335479657 555.4401837036901 545.8721391198428 676.0713355550724 543.2474105926221 449.6504305198943 1.0781109122626489 1.3979832918769035 0.6540576391999058 1.0841305478429413 1.3095574575265454 1.3147838708047428 1.2352711039584232 1.2139922528011262 1.5035487340096305 1.2081549882305445 1.0 8.812660039792735 -6.672942796247405 6.301052610897977 1.2507475810164588 1.0461830098758325 0.19954273370074782 0.19465696427781992 0.3296894282135045 19.215934501443055 0.03294169448148657 0.06892962110730075 2.123524146765507e-07 6.672942796247405 -0.20456457114062632 SDS(ph)LILDHQWELEK ddPTM_A549_PD325901_60min_R1 2 SDSLILDHQWELEK 14 0 H7C3Y8;A0A3B3ITK3;A0A3F2YNW9;A0A3B3IUA1;A0A3B3IU40;A0A3B3IT28;A0A3B3ITE5;A0A3B3ITF7;A0A3B3ITW6;Q12756;Q12756-3;Q12756-2 H7C3Y8 KIF1A Kinesin-like protein KIF1A 1 S(0.101)DS(0.899)LILDHQWELEK;S(0.128)DS(0.872)LILDHQWELEK 144.33 1.5136e-13 5038400.0 1217.92 1445.49 1615.56 1250.1399999999999 1424.98 1286.48 969.7 1090.3400000000001 1868.33 1427.73 1716.07 True False 1341.5623418146831 1567.306515247597 1725.2016167514869 1327.3583085260625 1324.8943207141251 1276.0033334110851 1006.6024641402001 1068.5923133448175 1789.8105873925895 1337.582884142074 1505.0042690640153 0.8914010208416357 1.0413967238925697 1.1463101150034716 0.8819631517401386 0.8803259551802446 0.8478403414793306 0.6688369493903306 0.7100261011281989 1.1892395418291402 0.8887568704200001 1.0 10.555551863971814 -8.775951843156362 24.999681265083495 1.0893631129111228 0.889032456487335 0.12217568375112398 0.1445897784680199 232.5003305951217 400511.8588975452 0.02648768525312686 0.028258957073251073 1.675128612750503e-09 8.775951843156362 -0.20033065642378778 SDS(ph)LLSFR ddPTM_A549_MK2206_60min_R1 1 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.011)DS(0.989)LLSFR 103.7 0.0021194000000000005 5348200.0 634.07 698.04 679.36 521.61 852.77 723.58 630.3 679.74 862.03 793.11 958.48 True False 741.0855144768624 733.5672544300958 775.7034634597601 649.4044734159628 727.3286626575884 800.1487553264685 744.8173512646499 776.0952266164445 666.7815813790431 613.9459001611829 720.4629632977404 1.0286240268128806 1.0181887089273454 1.0766736154058079 0.9013710717945513 1.0095295660007586 1.1106035925344255 1.0338038028428738 1.0772173812572698 0.9254904351044166 0.8521546997377879 1.0 9.492780457731918 -8.765303096140816 24.99796470595322 0.9648149293383885 1.0306068545002038 0.3151125737667082 0.06287463179328447 110.93980196240364 717770.588040559 0.009734133988923198 0.010550838993709998 1.716709869170609e-09 8.765303096140816 0.06579192516181531 SDS(ph)LLSFR ddPTM_A549_PD325901_60min_R1 3 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.009)DS(0.991)LLSFR;S(0.01)DS(0.989)LLSFR;S(0.421)DS(0.577)LLS(0.002)FR 127.4 0.0010627 22320500.0 2527.79 2633.3700000000003 2458.04 2333.17 2241.37 2513.67 2312.41 2127.4700000000003 2064.59 2216.42 2898.44 True False 2784.4093799393536 2855.2933317128186 2624.857375795282 2477.2846118864713 2083.9439035067307 2493.1995049246334 2400.4100279493036 2085.035941882071 1977.8224621051233 2076.4748629433975 2541.950254724984 1.0953831117519652 1.1232687683031528 1.0326155560739987 0.974560618281844 0.8198208834469086 0.9808215169790468 0.9443182546501117 0.8202504899560487 0.7780728432544034 0.8168825723806517 1.0 11.311720082131709 -6.244245415165712 1.8892635624146303 0.8931664146296017 1.108359867535411 0.6169801214765362 0.07050398555969281 0.2332777464801467 1.582509591049971 0.01308252942155334 0.04483961444535253 5.698421695669764e-07 6.244245415165712 0.21519345290580927 SDS(ph)LSPPRHGR ddPTM_A549_MK2206_60min_R1 2 SDSLSPPRHGR 11 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.013)DS(0.526)LS(0.461)PPRHGR;S(0.046)DS(0.477)LS(0.477)PPRHGR 42.788999999999994 0.020706 6633700.0 1561.67 1810.6799999999998 2151.64 1406.43 1568.33 1386.1 1460.7 1364.06 2371.17 2424.1 2911.7 True False 1825.2417168342329 1902.835877960412 2456.774905968203 1751.0054131370428 1337.6307345541884 1532.7761819812847 1726.0902823929468 1557.4196822585511 1834.1037809804125 1876.4941263894325 2188.644531168132 0.8339598737215028 0.869412940686546 1.1225097867569036 0.8000410245708056 0.6111685636955687 0.7003312598977439 0.7886572066920758 0.7115909687843731 0.8380089844930221 0.8573772943329006 1.0 11.09582194280608 -10.170266778565036 0.9042325091828111 0.9874075593771339 0.8085750738458088 0.08509979390056932 0.1283843847833863 0.6128166993499434 0.9915910099243113 0.05945400522661851 0.025723977519997297 6.756677984378458e-11 10.170266778565036 -0.17883248553132503 SDS(ph)NASFLR ddPTM_A549_PD325901_60min_R1 1 SDSNASFLR 9 0 A0A5F9ZI40;A0A5F9ZHN5;A0A5F9ZGY4;A0A5F9ZHF7;Q01484;A0A5F9ZH30;A0A5F9ZHT4;A0A5F9ZI65;A0A5F9ZI46;A0A5F9ZHT8;A0A5F9ZH19;A0A5F9ZI30;A0A5F9ZGZ5;I6L894;A0A5F9ZHD2;A0A5F9ZHR8;D6RHE1;A0A5F9ZGY3;A0A5F9ZHE4;A0A5F9ZHS1;A0A5F9ZGX3;A0A5F9ZI56;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZHQ5;A0A5F9ZH39;A0A5F9ZGY1;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHA1;A0A5F9ZI36;A0A5F9ZHY6;A0A5F9ZH38;A0A5F9ZHQ3;A0A5F9ZI53;A0A5F9ZH34;A0A5F9ZH35;A0A5F9ZHL9;A0A5F9ZHG3;A0A5F9ZI69;Q01484-5;Q01484-2;A0A5F9ZH58;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZI08;A0A5F9ZHE2;A0A5F9ZHJ6;A0A5F9ZHJ4;A0A5F9ZI15;A0A5F9ZI73;A0A5F9ZGS7;A0A5F9ZGX8;A0A5F9ZHR2;E9PHW9;A0A5F9ZI45;A0A0U1RQN6;B7Z651 A0A5F9ZI40 ANK2 Ankyrin-2 1 S(0.008)DS(0.985)NAS(0.007)FLR 113.42 0.0002384 5667300.0 1736.1 1816.8 1720.5 1787.2 1591.1 1844.3 1526.0 1470.1 1656.9 1779.3 2277.3 True False 1912.3475939507298 1969.9081120601538 1837.263476206972 1897.5912849743063 1479.3466249970134 1829.280632275717 1584.0727650592412 1440.7777022288608 1587.2662550249584 1666.9546943427622 1997.206536994111 0.9575111830090953 0.9863316965830471 0.9199166146192067 0.9501227088062058 0.7407078825325192 0.915919609911186 0.793144192008977 0.7213964482598272 0.7947431703352363 0.8346431195101167 1.0 10.963767818490373 -6.575710978007364 24.99986721980516 0.8692624200765894 0.9539726930153384 0.2797248920307144 0.0811423355290825 155.14225564424467 73411.74847623946 0.014948686911390488 0.03111817829950454 2.6563727839317127e-07 6.575710978007364 0.084710272938749 SDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A549_MK2206_60min_R1 2 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 31 0 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.179)DS(0.821)PEIPFQAAAGPSDGLDASSPGNSFVGLR;S(0.19)DS(0.81)PEIPFQAAAGPSDGLDASSPGNSFVGLR 150.59 4.495499999999999e-37 15394100.0 3432.3199999999997 3228.4 2543.2 2519.3999999999996 4942.5 3400.98 3039.56 3400.16 4713.3 4183.1 4721.4 True False 4011.611703832739 3392.7117703886906 2903.8640018117953 3136.653113100165 4215.464797290161 3760.869446212185 3591.8087072980793 3882.143092553283 3645.7450755934765 3238.134804710877 3548.946075989016 1.1303670492414533 0.9559772669814978 0.8182327766145474 0.8838266476692086 1.1878075087729814 1.0597144520332307 1.0120775662383426 1.0938861874567682 1.02727542135942 0.9124215289206605 1.0 11.79317493838068 SDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_A549_PD325901_60min_R1 1 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 31 0 Q12888;Q12888-3;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.319)DS(0.681)PEIPFQAAAGPSDGLDASSPGNSFVGLR 98.977 1.7528e-10 27741000.0 769.12 926.86 740.86 603.16 526.36 732.42 771.8 674.04 798.62 925.9 947.95 True False 847.2004962037811 1004.9697450154525 791.1392147530928 640.4158233242518 489.39028944342175 726.4554143530768 801.171271345165 660.5957434258493 765.0567786758604 867.4385159849176 831.3581595501549 1.0190559706086224 1.2088288705306487 0.9516226017209906 0.7703248184522284 0.5886636028306129 0.8738176272259832 0.9636896711023755 0.7945982556823589 0.9202493172014213 1.0433992930968352 1.0 9.699326331857236 -5.907260091834004 6.469721058648901 0.9049279596145818 1.1113405605549174 0.3227429015705594 0.12840536399322974 0.2110412040510805 12.256290199225337 0.01891696313821048 0.059990553972273895 1.2380549137060044e-06 5.907260091834004 0.20641260094033553 SDS(ph)PES(ph)DAEREK ddPTM_A549_PD325901_60min_R1 1 SDSPESDAEREK 12 1 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 2 S(0.046)DS(0.954)PES(1)DAEREK 134.61 1.3448e-07 8179000.0 1985.6 1876.0 2289.4 1622.7 2421.0 1530.7 1880.0 2335.1 2416.7 2050.5 2757.4 True False 2187.176650278538 2034.0971038225716 2444.7724512805817 1722.9304935809112 2250.9573119965894 1518.2344867019676 1951.5444287754733 2288.5245986494883 2315.1345033006314 1921.0310800594818 2418.257280598762 0.9044433228117861 0.8411417263753375 1.0109645780432652 0.7124678202785406 0.930817961370616 0.6278217371172565 0.8070044674040099 0.9463528206902981 0.9573565732126743 0.7943865590611737 1.0 11.239752027056525 -8.387700659207987 4.089405709231808 0.9787341396252538 0.832127939570291 0.06820511967566278 0.11233690866123443 0.2028288640748249 5.79881475137123 0.015658628701150975 0.019004771356826336 4.095428430060161e-09 8.387700659207987 -0.14660620005496283 SDS(ph)PESDAEREKDKK ddPTM_A549_MK2206_60min_R1 1 SDSPESDAEREKDKK 15 3 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 S(0.006)DS(0.595)PES(0.399)DAEREKDKK 60.317 0.0016618 61816000.0 1359.0 2023.3 1868.7 1330.6 2354.5 1447.6 1140.3 1266.0 2160.8 2256.5 2230.5 True False 1588.3659756400016 2126.2773277869646 2133.709759431309 1656.5970597329037 2008.1561689872901 1600.7840711608892 1347.477749717722 1445.4593769623955 1671.3822500885544 1746.7550827926877 1676.6052913317021 0.9473702509780263 1.2682038752830698 1.2726368993721449 0.98806622423164 1.1977513010186447 0.954776940903849 0.8036940815374863 0.8621345670538169 0.9968847520223444 1.041840373416254 1.0 10.71132737233432 -7.27028703497755 24.62686605307139 0.9681577244537095 1.141721814594303 0.4013434720183008 0.11417486698503541 447.0278830283421 1244272.1482102252 0.01701331392792312 0.0274534967613903 5.366769772609176e-08 7.27028703497755 0.1735640901405936 SDS(ph)PSVGETER ddPTM_A549_MK2206_60min_R1 1 SDSPSVGETER 11 0 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 S(0.056)DS(0.472)PS(0.472)VGETER 78.692 0.0010299 10879000.0 250.01 304.2 337.88 305.4 570.73 289.34 427.71 530.8 539.99 533.48 715.19 True False 292.2055758423524 319.6824806567463 385.796464663483 380.2230137099271 486.7763730414596 319.9577667516522 505.41937063208513 606.0425255068242 417.6831271868375 412.96649748204896 537.5885847601521 0.5435486989976199 0.5946600982968682 0.7176425906357518 0.7072750882155832 0.9054812301467252 0.5951721740788134 0.940160161431963 1.127335182865189 0.7769568384216882 0.7681831593695317 1.0 9.070358693805149 -4.437017827280891 0.2652949911360876 0.9420685294698884 1.381264783239305e-11 0.45447841035821535 0.13048859468990448 8.70045291107318 0.3214764413494231 0.06111150201896532 2.889628005335698 3.655797846822368e-05 4.437017827280891 -0.9420685294560758 SDS(ph)PSVGETER ddPTM_A549_PD325901_60min_R1 2 SDSPSVGETER 11 0 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 S(0.025)DS(0.965)PS(0.01)VGETER;S(0.007)DS(0.953)PS(0.04)VGETER 136.27 3.9645999999999996e-08 32493000.0 1347.38 1265.22 1217.38 1331.8600000000001 1526.28 1371.5500000000002 1359.6 1517.25 1304.8600000000001 1371.53 1396.42 True False 1484.1650257112692 1371.8445296899754 1299.9987275006356 1414.1259673264763 1419.0793581801531 1360.3805515359536 1411.3403220016671 1486.9872584904017 1250.0212719728825 1284.9313617332261 1224.6691926357157 1.2118905534947526 1.12017558532481 1.0615101084585925 1.1547003679279417 1.1587450445503822 1.1108147079360768 1.1524257574930912 1.2141950393070056 1.020701165253128 1.049206895592609 1.0 10.258176386056439 -8.849248413641309 7.723195158394849 1.009251207743924 1.1435944990653306 0.6223698815198058 0.04283982055042065 0.09543520837597387 7.313256760308072 0.007125941431473085 0.007572883560175575 1.4149841866136908e-09 8.849248413641309 0.13434329132140665 SDS(ph)PVPTAPTSGGPK ddPTM_A549_PD325901_60min_R1 2 SDSPVPTAPTSGGPK 15 0 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 S(0.013)DS(0.987)PVPTAPTSGGPK;S(0.004)DS(0.996)PVPTAPTSGGPK 230.26 2.0563999999999998e-54 25278000.0 12086.8 11621.8 12866.099999999999 12856.8 14174.3 13180.3 13335.8 12859.9 13833.3 13817.0 14723.3 True False 13313.843038168117 12601.209872710639 13739.270916144436 13650.935336088654 13178.746066680396 13072.964006714534 13843.301166629773 12603.399206103612 13251.934507596578 12944.592261976031 12912.427438688519 1.0310875396114032 0.97589782653528 1.064034704658127 1.0571935757940758 1.0206249854457208 1.0124327179214196 1.0720913036964799 0.9760673789609079 1.0262930475714287 1.0024909974085228 1.0 13.656472621446106 -10.772377450489047 0.3628285957107992 0.9906820145005483 1.0293506402380392 0.10834487543162263 0.02959829053987411 5.225167617967772 0.8427515080023625 0.07979060268650691 0.010389521320599995 1.688972387621972e-11 10.772377450489047 0.03866862573749097 SDS(ph)PVPTAPTSGGPKPSTASAVPELATDPELEKK ddPTM_A549_PD325901_60min_R1 1 SDSPVPTAPTSGGPKPSTASAVPELATDPELEKK 34 2 B4E349;F5H6D8;B4DTN4;Q86U44 B4E349 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 S(0.126)DS(0.775)PVPT(0.027)APT(0.036)S(0.036)GGPKPSTASAVPELATDPELEKK 120.47 1.1166e-21 33042000.0 2586.8 3031.4 2421.3 2818.7 3490.4 2655.3 2868.0 2869.9 3059.2 2959.3 3234.7 True False 2849.410031698488 3286.866716699224 2585.6239784597137 2992.8046972678344 3245.2463452263073 2633.6761171619087 2977.143309429817 2812.6575931070024 2930.632462654568 2772.4492929627027 2836.8524064527514 1.0044266050701731 1.1586315556011524 0.9114411354564695 1.0549737062317206 1.1439602348873055 0.9283796757178151 1.0494530144247045 0.991471247044536 1.033057784743578 0.9772976862160483 1.0 11.470075377813052 -7.268716530937706 24.958457934095325 1.0113307574389088 1.0525192285518867 0.13080376416764994 0.06897333458468442 1131.802471209731 3881747.438072448 0.009424205239798243 0.015241877373970968 5.386212321524266e-08 7.268716530937706 0.041188471112977965 SDS(ph)QDEVEK ddPTM_A549_PD325901_60min_R1 1 SDSQDEVEK 9 0 H0YBZ4;Q15390-2;Q15390;H7C5V5;H0YF01 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 S(0.02)DS(0.98)QDEVEK 66.393 0.005707899999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SDS(ph)QQAVK ddPTM_A549_MK2206_60min_R1 2 SDSQQAVK 8 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 S(0.004)DS(0.996)QQAVK;S(0.322)DS(0.678)QQAVK 84.479 0.0031563000000000003 29270000.0 16873.6 19445.8 14338.7 13673.1 11986.2 8991.099999999999 7388.2 10555.5 9078.3 21400.5 20924.5 True False 19721.451160087676 20435.508160272715 16372.143269416025 17023.01011380878 10223.045858023124 9942.532234190852 8730.54030559017 12051.774449863007 7022.079545066137 16566.112186707265 15728.369163178748 1.2538776878569853 1.2992769910381885 1.0409307601797901 1.0823124722721338 0.6499749434897558 0.6321400604880919 0.5550823620054008 0.7662443782205395 0.44645948173096894 1.0532631841761277 1.0 13.941081468474161 -6.513530758080574 1.9050243784429686 0.7073306565499102 1.2302972267835266 0.5754085459419298 0.18078591047952558 0.2081999896224485 1.4889246608206388 0.031232766644251578 0.08594871448462917 3.0652735795674714e-07 6.513530758080574 0.5229665702336164 SDS(ph)QQAVK ddPTM_A549_PD325901_60min_R1 2 SDSQQAVK 8 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 S(0.017)DS(0.983)QQAVK;S(0.191)DS(0.809)QQAVK 94.76700000000001 0.0025266999999999998 66996000.0 23198.0 25768.0 22287.0 21877.0 25353.0 22689.0 17343.5 21985.3 21789.6 25546.0 27726.0 True False 25553.043882535 27939.559792803855 23799.529842618293 23228.29260372811 23572.292743101807 22504.228306513967 18003.516383227354 21546.785944365805 20873.858887375125 23933.02120029238 24315.87776959501 1.050878941104358 1.1490253429279844 0.9787649892029657 0.9552726339483893 0.9694197744560555 0.9254952060440788 0.7404016648635757 0.8861200137840912 0.858445624919046 0.9842548735879336 1.0 14.569611051363966 -6.073639867646358 1.5177177875681547 0.9149331306779664 1.1044460126608728 0.47980817335645953 0.07260727058532943 0.32729929153566467 1.3598492125290365 0.011988907511555198 0.057977669933216736 8.440343708220508e-07 6.073639867646358 0.1895128819829064 SDS(ph)RAQAVSEDAGGNEGR ddPTM_A549_MK2206_60min_R1 6 SDSRAQAVSEDAGGNEGR 18 1 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 S(0.186)DS(0.807)RAQAVS(0.008)EDAGGNEGR;S(0.037)DS(0.917)RAQAVS(0.046)EDAGGNEGR;S(0.004)DS(0.996)RAQAVSEDAGGNEGR;S(0.068)DS(0.932)RAQAVSEDAGGNEGR;S(0.027)DS(0.971)RAQAVS(0.002)EDAGGNEGR;S(0.079)DS(0.921)RAQAVSEDAGGNEGR 198.45 3.7798e-49 1247226200.0 13499.630000000001 15037.89 13966.720000000001 11760.810000000001 12457.2 11093.26 11953.669999999998 11865.46 15751.720000000001 22693.28 21518.5 True False 15778.037509734391 15803.254368978565 15947.410911994673 14642.208977962833 10624.762381953056 12267.141410089971 14125.497108189284 13547.425291447247 12183.98057032806 17566.852286832553 16174.862569612736 0.975466557556795 0.9770255729200259 0.9859379542398481 0.9052447224788631 0.6568687886049493 0.7584077674413078 0.8732993586434831 0.8375604573542663 0.7532664044526576 1.0860588280876593 1.0 13.98146583390136 -6.518758515010698 24.934735529324936 0.8512701068570809 0.9736248981040013 0.20275431336151495 0.11041498050138407 214.3731694117483 1297337.0859648641 0.016286648974187096 0.034548642370866856 3.0285969802639955e-07 6.518758515010698 0.12235479124692039 SDS(ph)RAQAVSEDAGGNEGR ddPTM_A549_PD325901_60min_R1 7 SDSRAQAVSEDAGGNEGR 18 1 P55884-2;P55884;C9JZG1 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 S(0.138)DS(0.855)RAQAVS(0.007)EDAGGNEGR;S(0.006)DS(0.497)RAQAVS(0.497)EDAGGNEGR;S(0.126)DS(0.874)RAQAVSEDAGGNEGR;SDS(1)RAQAVSEDAGGNEGR;S(0.002)DS(0.998)RAQAVSEDAGGNEGR;S(0.058)DS(0.942)RAQAVSEDAGGNEGR;S(0.109)DS(0.891)RAQAVSEDAGGNEGR 204.23 1.4348e-49 1567584600.0 17804.79 17957.4 17989.15 17440.989999999998 20403.23 17569.82 17786.010000000002 18364.14 17748.22 17453.14 20176.32 True False 19612.31917360637 19470.733119500786 19210.001896546713 18518.280340937796 18970.177512122315 17426.737211175245 18462.86634342813 17997.85282131087 17002.324034497607 16351.145761828502 17694.760548230366 1.1083687241852944 1.1003671435072362 1.0856322041875772 1.046540318557167 1.072078791934797 0.9848529548436344 1.043408657218285 1.0171289276424154 0.9608677092947715 0.9240670828667281 1.0 14.111034618384195 -6.877243329482942 0.5789186065406954 0.9826407314999644 1.1164749286588251 0.7490386688306527 0.028459505137275125 0.3567058956110753 0.19911801216705866 0.005102271653168372 0.022940325356180416 1.3266509443932595e-07 6.877243329482942 0.1338341971588607 SDS(ph)RTPAFSPFVR ddPTM_A549_PD325901_60min_R1 1 SDSRTPAFSPFVR 13 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 S(0.463)DS(0.521)RT(0.016)PAFSPFVR 50.07899999999999 0.008093600000000001 2495900.0 558.65 401.2 415.76 479.99 627.65 487.55 559.88 531.04 762.71 681.66 665.38 True False 615.3637367436061 435.01053201152234 443.9759737679803 509.6378921636172 583.5660292749517 483.57955444668755 581.1865397780914 520.4479906071791 730.6559510954711 638.6198712671763 583.5424781913414 1.0545311776631805 0.7454650659876795 0.7608288862604484 0.8733518316322275 1.0000403588161795 0.8286964060363119 0.9959626959453713 0.8918767871368675 1.2521041370631665 1.0943845480564576 1.0 9.188693868578694 -8.73700678575896 24.1828558038115 1.1190491567354635 0.8885533895077267 0.46181670181024836 0.10643488257066665 110.80513506136744 109672.3295455131 0.02102357483887121 0.02383209255700086 1.8322857930715315e-09 8.73700678575896 -0.2304957672277368 SDS(ph)SSPQR ddPTM_A549_PD325901_60min_R1 1 SDSSSPQR 8 0 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3;E9PS88 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 S(0.007)DS(0.331)S(0.331)S(0.331)PQR 59.35 0.012706 23207000.0 970.39 1326.0 940.02 952.03 1074.1 657.11 430.39 706.23 762.62 1101.8 1196.9 True False 1068.9032784366386 1437.7466735974049 1003.8154099994638 1010.8347308829944 998.658921443839 651.758714024126 446.768726968445 692.1436886232827 730.5697334824879 1032.2321599656361 1049.6888877742279 1.0183048433552089 1.3696883813317478 0.9562980247680485 0.962985073631083 0.9513856277562456 0.6209065577574348 0.4256201358059324 0.6593798378593033 0.6959869176395648 0.9833696174057752 1.0 10.035746082483502 -6.356657087174073 1.422909987166212 0.7911876138787959 1.1788869392868164 0.42813212014585245 0.1849287675831359 0.38437589590834753 1.4560940499701922 0.031459530410279574 0.11688193714134928 4.398888083780249e-07 6.356657087174073 0.38769932540802055 SDS(ph)VSASER ddPTM_A549_PD325901_60min_R1 2 SDSVSASER 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 S(0.057)DS(0.853)VS(0.091)ASER;S(0.012)DS(0.979)VS(0.008)AS(0.001)ER 179.72 2.0312999999999998e-08 206743000.0 3152.06 4203.87 3817.1800000000003 4369.45 4179.73 3674.7599999999998 3380.02 3919.75 3269.32 3411.47 3461.33 True False 3472.0548107760724 4558.1448783830465 4076.2367893680466 4639.341002759053 3886.1601840857065 3644.833972922796 3508.648510717915 3841.5675112656113 3131.9218497665493 3196.0692019948865 3035.608353178688 1.1437756149077554 1.501558945708546 1.3428072119710968 1.5283068377055433 1.2801915569959401 1.200693089774301 1.1558304308406224 1.2655016933403074 1.0317279060347189 1.0528595359306396 1.0 11.567769954409366 -8.091302269356955 0.6738133611504712 1.002720572827808 1.3833320936761084 0.5730519747193668 0.11084516354370286 0.27423779442284607 0.25527134835675797 0.02449503212787376 0.03767482366862737 8.103968245914363e-09 8.091302269356955 0.3806115208483005 SDS(ph)VSTR ddPTM_A549_PD325901_60min_R1 1 SDSVSTR 7 0 O14668 O14668 PRRG1 Transmembrane gamma-carboxyglutamic acid protein 1 1 S(0.006)DS(0.994)VSTR 74.92 0.018366999999999998 2127200.0 354.64 419.87 334.41 369.91 386.42 242.17 135.54 284.15 361.0 470.9 565.01 True False 390.64279172783074 455.2539184338929 357.1050735706905 392.7585005734363 359.2791922766301 240.19784781120765 140.6980488703339 278.4824053386373 345.82842541131623 441.1672936357035 495.51735189348875 0.7883534052543113 0.9187446548425807 0.7206711777218451 0.7926231020419636 0.725058751028071 0.4847415471796396 0.28394171936198287 0.5620033370667855 0.697913855266267 0.8903165387647862 1.0 8.952791767978361 -10.26533936787697 0.9402560412053325 0.9785555854955574 0.6633611598039616 0.2938997927103564 0.1656633158534032 0.475880456249297 0.823688796672644 0.08505058973773146 0.03488894427834326 5.4282598878069914e-11 10.26533936787697 -0.31519442569159584 SDSAPPT(ph)PVNR ddPTM_A549_MK2206_60min_R1 2 SDSAPPTPVNR 11 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 SDSAPPT(1)PVNR;SDS(0.001)APPT(0.999)PVNR 95.094 0.00030281 4937800.0 1238.4 978.75 1049.91 797.39 1649.12 1059.05 864.2 967.06 1393.8400000000001 1242.74 1478.86 True False 1447.4116440269163 1028.5641944207443 1198.8030253783515 992.7505857961968 1406.5366325760542 1171.1179680595055 1021.2139536140096 1104.1437164970414 1078.137465505105 962.0041708795857 1111.6182475403727 1.3020761823850395 0.9252854536137758 1.078430502585657 0.8930679106724012 1.265305455077077 1.053525318292305 0.9186732548459 0.9932759910519012 0.9698810431464676 0.8654087615133781 1.0 10.118445706770856 -7.545583799794909 18.78703153615944 0.9817209054246399 1.0804052432775197 0.2240500946391768 0.1208299960122978 19.56126508009422 16184.994369077145 0.016128900670156404 0.023928689837716993 2.8471883646374466e-08 7.545583799794909 0.09868433785287989 SDSAPPT(ph)PVNR ddPTM_A549_PD325901_60min_R1 2 SDSAPPTPVNR 11 0 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 SDSAPPT(0.999)PVNR;SDSAPPT(1)PVNR 97.911 0.00029429 5147800.0 1439.87 1234.59 1285.81 1233.2800000000002 1355.3000000000002 1244.62 1357.6 1372.8400000000001 1261.35 1456.29 1527.96 True False 1586.0445424237284 1338.6332320939823 1373.0727988036538 1309.4569046179004 1260.108403531175 1234.484227372446 1409.2642109072253 1345.4576292278546 1208.3398459627804 1364.339600867993 1340.0306065364775 1.1835882961831097 0.9989572070699886 1.0246577892370525 0.9771843256643221 0.9403579271880408 0.9212358444283351 1.0516656888529532 1.004049924430759 0.9017255576616471 1.0181406262013268 1.0 10.388050237131797 -2.0000036134833983 0.8904109218060687 0.9615754590341866 103.11806204386123 0.5963655476979531 0.045824036624532785 407.43231574628044 0.88873669273834 0.007493170767381688 84563.30097760628 0.009999916796816074 2.0000036134833983 102.15648658482704 SDSDS(ph)STLSK ddPTM_A549_MK2206_60min_R1 1 SDSDSSTLSK 10 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.02)DS(0.368)DS(0.578)S(0.03)T(0.003)LS(0.001)K 128.08 1.4988e-06 118920000.0 4378.2 5326.7 4263.6 4155.0 6598.0 4911.7 4048.3 4913.2 6336.7 6216.8 5779.3 True False 5117.133123287021 5597.806277824756 4868.242591272721 5172.975186525037 5627.44294031775 5431.4528338774135 4783.823707956023 5609.661146043953 4901.447567630573 4812.420562244887 4344.140309434342 1.1779391913686441 1.2885878169422331 1.1206457997455022 1.190793763104447 1.2954100327046087 1.250294062114364 1.1012129828235067 1.2913167500279004 1.128289424028479 1.1077958397875782 1.0 12.084854985515246 -9.627733432397452 0.6674651248363734 1.009254562783289 1.2177577961504782 0.39392462983280063 0.0713947560861995 0.3084257475788822 0.2963899648409005 0.027683251941541753 0.015053498176890459 2.3564952441165896e-10 9.627733432397452 0.20850323336718923 SDSDYDLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SDSDYDLSPK 10 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;E9PMG3;Q07343-3;Q07343;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q07343-3;Q08499-6 PDE4D;PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 SDSDYDLS(1)PK;SDSDYDLS(1)PK 207.54 6.0345e-21 534230000.0 49238.0 50966.0 44658.0 41130.0 62731.0 46371.0 47110.0 46282.0 68513.0 64029.0 65644.0 True False 57548.17064647716 53559.95170661319 50991.17591731333 51206.85184639585 53503.35299925324 51277.948441421366 55669.27719828281 52842.615232680575 52994.91489277906 49564.80442992818 49342.78311776654 1.166293569398524 1.0854667759372534 1.033406968464113 1.037777940579078 1.084319724559449 1.0392188117771177 1.1282151852970435 1.0709289564506521 1.0740155204925503 1.0044995701120414 1.0 15.590551470885945 -10.540371383681695 0.6478949465135735 0.9940274275024839 1.0785965039378151 0.3859319781129006 0.03769009419123913 0.7758247981773115 0.5269707168112118 0.03595098212944487 0.007868364252780136 2.8815662993331116e-11 10.540371383681695 0.08456907643533129 SDSDYDLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SDSDYDLSPK 10 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;E9PMG3;Q07343-3;Q07343;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q07343-3;Q08499-6 PDE4D;PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4D;cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 SDS(0.006)DYDLS(0.993)PK;SDS(0.001)DYDLS(0.999)PK 108.24 5.382399999999999e-09 346330000.0 24313.0 21823.0 23674.0 22639.0 26942.0 25182.0 25740.0 23897.0 26538.0 24278.0 27454.0 True False 26781.237861715388 23662.100797825166 25280.660003326844 24037.359613100558 25049.686864854222 24976.926141065498 26719.54978546847 23420.355588166152 25422.700148380936 22745.08293669059 24077.332045244944 1.1123008899569684 0.9827542666837216 1.0499776285769813 0.9983398313372398 1.0403846579754799 1.0373626984140136 1.1097388089036775 0.9727139013639786 1.0558769593162498 0.9446679097978605 1.0 14.555387918726028 -10.9842772323988 1.1492603944401671 0.9991233833726393 1.0391924518671314 0.19830817202209805 0.04597287965724439 0.928096560922462 2.098521095110404 0.030710186306813853 0.006421788536414195 1.0368663196678076e-11 10.9842772323988 0.0400690684944921 SDSEEKS(ph)DSEKKEDEEGK ddPTM_A549_MK2206_60min_R1 4 SDSEEKSDSEKKEDEEGK 18 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 SDS(0.011)EEKS(0.985)DS(0.004)EKKEDEEGK;S(0.001)DS(0.057)EEKS(0.917)DS(0.026)EKKEDEEGK;SDS(0.001)EEKS(0.904)DS(0.096)EKKEDEEGK;S(0.001)DS(0.024)EEKS(0.972)DS(0.003)EKKEDEEGK 117.62 1.3029e-10 206994000.0 41298.7 40017.9 36722.5 33897.8 5441.6 2668.82 3025.85 2862.92 6426.4 50714.2 51289.8 True False 48268.910903726064 42054.64017972917 41930.302692094105 42202.76252173007 4641.147848443932 2951.232760980662 3575.6077777631904 3268.7476773247877 4970.830660852038 39257.82699745843 38553.127133532704 1.2520102646029658 1.0908230617471992 1.0875979670044458 1.0946650935877775 0.12038317494632385 0.07654976341500822 0.09274494816928097 0.08478553934167636 0.1289345645979652 1.0182786693666879 1.0 15.234560264775771 -6.739662928371976 22.076227559756646 0.4365058156185967 1.1252667897670126 0.5425255691580311 0.33596154619579693 51.895400765332305 52608.228122103814 0.05959116159872634 0.12389908221523668 1.8211137423725222e-07 6.739662928371976 0.6887609741484159 SDSEEKS(ph)DSEKKEDEEGK ddPTM_A549_PD325901_60min_R1 2 SDSEEKSDSEKKEDEEGK 18 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 SDSEEKS(0.942)DS(0.058)EKKEDEEGK;SDS(0.005)EEKS(0.846)DS(0.148)EKKEDEEGK 134.47 2.909e-13 233470000.0 22014.0 23855.0 24462.0 21387.0 26588.0 21373.0 25084.0 22474.0 22715.0 24920.0 24856.0 True False 24248.84507414974 25865.344569129786 26122.138421955766 22708.02641659885 24720.55060362053 21198.94537419556 26038.58534649148 22025.738439488076 21760.3675435403 23346.54694712619 21798.869575166027 1.112390025112807 1.1865452233631608 1.1983253687482467 1.0417066049364578 1.1340290155129409 0.9724791141622352 1.1944924601115772 1.0104073683059467 0.9982337601730692 1.0709980564186377 1.0 14.411965702598115 -7.284495817516773 0.43809084112023716 0.9925814852346475 1.1784577623387251 0.29322327976155893 0.06863848752966158 0.8182565736616618 0.2846496769370481 0.018093900610948416 0.06104044574473623 5.1940267560261006e-08 7.284495817516773 0.18587627710407761 SDSFENPVLQQHFR ddPTM_A549_MK2206_60min_R1 1 SDSFENPVLQQHFR 14 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 71.558 0.001968 1990500.0 734.51 782.2 714.79 457.66 627.23 402.66 652.2 642.31 1029.5 840.83 971.56 False True 858.4773309546272 822.0106389536717 816.1579702166772 569.786720545138 534.9652978865569 445.26921393592426 770.696297786458 733.3594094918766 796.3198937736793 650.8859190182031 730.2948383081049 1.1755215646101052 1.1255873598368125 1.1175732422092615 0.7802146347702242 0.7325333137037178 0.6097115720651843 1.0553221210928347 1.0041963478625584 1.0904087664353983 0.8912645754502788 1.0 9.512335223478082 SDSFENPVLQQHFR ddPTM_A549_PD325901_60min_R1 1 SDSFENPVLQQHFR 14 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 0 81.494 0.00047657 1853300.0 421.84 374.94 562.43 637.73 710.93 628.59 318.17 566.69 655.86 478.22 569.87 False True 464.66488625780505 406.53750965204466 600.5998819663389 677.1211337100849 660.996729375355 623.4709714483507 330.27813345930474 555.3869233902952 628.2964850145875 448.0251075864645 499.77960270356726 0.9297395967026095 0.8134335764262333 1.201729479789456 1.3548394733342162 1.322576443295566 1.2474918305502518 0.6608475649519486 1.1112636858045408 1.2571471136793213 0.8964453634419336 1.0 8.965148212289977 -5.760129370535404 24.999389664374952 1.1336985454468598 0.8715865298539198 0.18512349537688766 0.19596247367911224 38.62094177113584 736930.1338359197 0.02687470839005823 0.09388242096646393 1.7372832381493123e-06 5.760129370535404 -0.26211201559293995 SDSIRPALNSPVERPS(ph)SDQEEGETSAQTER ddPTM_A549_MK2206_60min_R1 1 SDSIRPALNSPVERPSSDQEEGETSAQTER 30 2 Q9UKV5;R4GNG2;H3BRK9 Q9UKV5 AMFR E3 ubiquitin-protein ligase AMFR 1 S(0.001)DS(0.004)IRPALNS(0.028)PVERPS(0.482)S(0.482)DQEEGET(0.001)SAQTER 74.631 2.8796e-06 43656000.0 1774.6 1375.6 1699.8 1658.9 1838.1 1419.1 1600.1 1456.4 1984.5 2432.4 2220.8 True False 2074.109095195546 1445.6121643373456 1940.8571997010429 2065.330574470851 1567.717924916346 1569.268220077658 1890.8174579701185 1662.8491600379398 1535.0139185953058 1882.919150624832 1669.314069038083 1.242491831624423 0.8659917214801632 1.162667490617528 1.237233072420558 0.9391389876799635 0.9400676895881702 1.1326912610636974 0.99612720630584 0.9195477034946661 1.127959792317473 1.0 10.705039697251644 -6.789435678840525 24.998691437122968 0.9739388383853861 1.1109866541111837 0.15148065902981744 0.11729458983429192 210.87955790434893 188299.8905304859 0.015160185532970584 0.028654330995411464 1.6239188430805735e-07 6.789435678840525 0.1370478157257976 SDSIRPALNSPVERPS(ph)SDQEEGETSAQTER ddPTM_A549_PD325901_60min_R1 3 SDSIRPALNSPVERPSSDQEEGETSAQTER 30 2 Q9UKV5;R4GNG2;H3BRK9 Q9UKV5 AMFR E3 ubiquitin-protein ligase AMFR 1 SDSIRPALNSPVERPS(0.871)S(0.129)DQEEGETSAQTER;S(0.001)DS(0.008)IRPALNS(0.106)PVERPS(0.443)S(0.443)DQEEGETSAQTER;S(0.001)DS(0.138)IRPALNS(0.029)PVERPS(0.416)S(0.416)DQEEGETSAQTER 253.87 7.587099999999999e-139 88085000.0 9847.1 9449.3 7656.2 9627.9 10067.7 6908.6 6748.0 8998.5 10700.6 11199.5 14085.6 True False 10846.770342948117 10245.625673321229 8175.795772470681 10222.593516452616 9360.579483679492 6852.338652139034 7004.7988326472905 8819.017858313311 10250.890994338873 10492.361658681375 12353.160495975155 0.878056295510947 0.8293930671959947 0.6618383833946364 0.8275285923617111 0.7577477429139943 0.5547032805387438 0.5670450760296978 0.7139078182613008 0.8298192999013303 0.8493665780591083 1.0 13.592592575087382 -9.530303696551135 1.0242363472150344 0.965970238773006 0.7226999399225119 0.32070709882503967 0.10654661302124775 0.2897866625221892 0.6356699353892498 0.03126259225786257 0.022352536817472474 2.9491462053791837e-10 9.530303696551135 -0.24327029885049412 SDSIRPALNSPVERPSS(ph)DQEEGETSAQTER ddPTM_A549_MK2206_60min_R1 2 SDSIRPALNSPVERPSSDQEEGETSAQTER 30 2 Q9UKV5;R4GNG2;H3BRK9 Q9UKV5 AMFR E3 ubiquitin-protein ligase AMFR 1 SDSIRPALNS(0.006)PVERPS(0.259)S(0.735)DQEEGETSAQTER;SDS(0.001)IRPALNS(0.01)PVERPS(0.455)S(0.533)DQEEGETSAQTER 132.67 3.4993e-28 55109400.0 2419.74 1955.77 1960.37 1903.1799999999998 2888.51 1434.8 1405.1 2162.83 3285.9 3835.08 3533.3 True False 2828.1329550368937 2055.310339230917 2238.3799438627693 2369.4591854369974 2463.6140053860586 1586.6295836568427 1660.3884820910039 2469.4177758890805 2541.6488965040617 2968.732764421264 2655.884095880881 1.0648555633218937 0.7738704947322746 0.8428003117057571 0.8921545895439821 0.9276059935021178 0.5974016660281265 0.6251735475453044 0.9297912434202236 0.9569878822822158 1.1177945487250716 1.0 11.37497647278274 -8.506597528159405 23.753858931181785 0.9777782630948144 0.8128708629965685 0.31342886301367867 0.13057600090331864 374.69016639855954 546663.6144075281 0.020641685689562962 0.024595935131894318 3.1146013810994934e-09 8.506597528159405 -0.1649074000982459 SDSIRPALNSPVERPSS(ph)DQEEGETSAQTER ddPTM_A549_PD325901_60min_R1 1 SDSIRPALNSPVERPSSDQEEGETSAQTER 30 2 Q9UKV5;R4GNG2;H3BRK9 Q9UKV5 AMFR E3 ubiquitin-protein ligase AMFR 1 SDSIRPALNS(0.001)PVERPS(0.157)S(0.843)DQEEGETSAQTER 157.29 1.5322e-46 71276000.0 4947.7 5783.0 4336.3 4834.8 5626.9 5644.7 4257.4 5578.7 4526.5 5966.1 6754.3 True False 5449.986861695768 6270.353705440268 4630.587394290199 5133.434615372521 5231.685955751176 5598.731434694319 4419.417686738673 5467.428452094516 4336.266946327764 5589.399427819004 5923.5639190353995 0.9200520052096021 1.0585441114749277 0.7817232087949259 0.8666125132669212 0.8831990381565952 0.9451626607257112 0.746074111319514 0.9229964472105905 0.7320368287734941 0.9435872566272888 1.0 12.532249720865789 -5.757086076718878 24.99909872981453 0.8663001940846158 0.9892980431716581 0.2217899400541119 0.08675600696844189 141.89169627098704 814789.5012282121 0.014239121332626883 0.0515445527079502 1.749499905180962e-06 5.757086076718878 0.12299784908704237 SDSKEDENLVINEVINS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SDSKEDENLVINEVINSPK 19 1 Q5FWF5-2;Q5FWF5 Q5FWF5-2 ESCO1 N-acetyltransferase ESCO1 1 SDSKEDENLVINEVINS(1)PK;SDSKEDENLVINEVINS(1)PK 128.52 5.5995e-17 11012800.0 3991.9 4363.8 4295.7 4133.1 5354.8 5353.3 3977.0 4569.3 6814.9 6099.3 6298.6 True False 4665.635127415251 4585.898780703188 4904.8948539568 5145.709685541909 4567.116013460668 5919.782652767057 4699.56942087817 5217.01226789437 5271.336031159053 4721.463893852179 4734.483787483459 0.9854580429126776 0.968616429277235 1.035993589612421 1.0868575997969634 0.9646492032636671 1.2503544036663867 0.9926255177602271 1.1019178651929424 1.1133919277735977 0.9972499866478156 1.0 12.208991418310033 -5.894232882927862 3.9035408235842377 1.063210609583773 0.9771319442568223 0.15959894692669163 0.0755980343168155 0.29176369066410135 8.242140019038635 0.010065731852141324 0.03487378111996886 1.2757545239927036e-06 5.894232882927862 -0.08607866532695074 SDSKEDENLVINEVINS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SDSKEDENLVINEVINSPK 19 1 Q5FWF5-2;Q5FWF5 Q5FWF5-2 ESCO1 N-acetyltransferase ESCO1 1 SDSKEDENLVINEVINS(1)PK;SDSKEDENLVINEVINS(1)PK 170.28 1.2847999999999998e-34 16205100.0 4609.0 4749.3 5481.7 5582.1 5538.0 5196.4 4880.4 5658.9 5715.5 5955.0 4959.0 True False 5076.902287033528 5149.540178669799 5853.721126139929 5926.893639131082 5149.029985062826 5154.082241260928 5066.1262926573545 5546.028800178827 5475.297411186644 5579.000283713344 4349.074437691034 1.1673523550286495 1.1840542746386609 1.3459694033767162 1.3627942506032908 1.1839369637914259 1.1850986491731055 1.1648745877403308 1.2752204818833286 1.2589569320164435 1.28280174635854 1.0 12.086492686489745 -10.739938431615675 0.7366475641638244 0.9796632853950068 1.240254983969516 0.0 0.10650882116853425 0.4507215272220126 0.3796273964989791 0.07215525202330139 0.013788993194646803 1.8199588494165418e-11 10.739938431615675 0.26059169857450926 SDSKS(ph)SPQAGR ddPTM_A549_PD325901_60min_R1 1 SDSKSSPQAGR 11 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SDS(0.067)KS(0.466)S(0.466)PQAGR 45.257 0.039201 5958400.0 943.66 612.7 511.95 755.88 594.14 418.73 426.55 432.07 485.95 710.58 748.61 True False 1039.4596685142244 664.3343792708368 546.6940056054394 802.5689908719662 552.4096560717275 415.32000170948885 442.78259366711603 423.4520248976421 465.5272114366461 665.7138575316587 656.535715829781 1.5832492329841863 1.0118785060020676 0.832694996515894 1.2224300544832005 0.8414007688424827 0.6325931578369275 0.6744227054083309 0.6449794195315793 0.709066087666345 1.013979653323624 1.0 9.358729686268262 -2.0540740053480913 0.8245601027072981 0.8249890457329191 199.99908855490074 0.6138978755563307 0.17085698390570309 273.1735518110395 0.8876141559458721 0.02865594172237889 101794.89715182874 0.0088292943323489 2.0540740053480913 199.17409950916783 SDSKSS(ph)PQAGR ddPTM_A549_MK2206_60min_R1 1 SDSKSSPQAGR 11 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.027)DS(0.024)KS(0.135)S(0.814)PQAGR 40.552 0.027544 29703000.0 955.67 1065.1 824.75 459.29 786.01 666.57 393.59 383.6 839.92 1012.7 1228.8 True False 1116.9637321117589 1119.309040590074 941.7119516728061 571.8160706183115 670.3889702211509 737.1059949666444 465.1002082885189 437.9764747257307 649.679461076628 783.9303666493048 923.6550468452795 1.2092866659763517 1.2118258265496906 1.019549403090688 0.6190796797693413 0.7258001485628726 0.7980316867040476 0.503543189502463 0.47417753653988937 0.7033788894410221 0.8487263392613933 1.0 9.85121034539454 -6.009463823682713 3.926911776031674 0.7774028564203254 1.2018432278577271 0.6104712554367702 0.1529230067353235 0.15089208246550395 5.257323611608307 0.027458038941568896 0.0861896735016404 9.784444548826049e-07 6.009463823682713 0.42444037143740176 SDSKSS(ph)PQAGR ddPTM_A549_PD325901_60min_R1 1 SDSKSSPQAGR 11 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.005)DS(0.004)KS(0.28)S(0.711)PQAGR 66.215 0.0014688 73018000.0 2215.6 2034.8 1880.5 1754.5 2145.6 1766.2 1419.0 1623.9 1666.5 1951.0 2416.2 True False 2440.526080961487 2206.279737131222 2008.1220383651305 1862.8714802413951 1994.9004579181646 1751.8166527817427 1473.0008215065952 1591.5100405750948 1596.462800409858 1827.8135270402574 2119.022717553756 1.1517224712809502 1.0411779538060817 0.9476642330117859 0.8791182203048454 0.9414247621758011 0.8267097083338852 0.6951321518662423 0.7510585079580303 0.7533957928742018 0.8625738232529774 1.0 11.049183339255823 -5.512330469901738 0.9822779351673585 0.8547966873970047 1.2392858757424916 0.6057078999349181 0.08250647925227292 1.039951049146992 0.9936273938429703 0.017294304039718815 0.3819192339206345 3.0737569951357197e-06 5.512330469901738 0.38448918834548695 SDSKSS(ph)PQAGRR ddPTM_A549_PD325901_60min_R1 2 SDSKSSPQAGRR 12 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SDS(0.016)KS(0.094)S(0.891)PQAGRR;S(0.016)DS(0.075)KS(0.315)S(0.594)PQAGRR 85.45700000000001 8.1036e-05 203450000.0 7674.2 7512.9 6068.1 6775.200000000001 6707.0 6417.6 4736.5 6461.299999999999 6363.0 8951.2 9642.1 True False 8453.279134552557 8146.038449524844 6479.917756449593 7193.688716404385 6235.923457893894 6365.337193348495 4916.750099412251 6332.424302708205 6095.58523792855 8386.01970437865 8456.182826307866 0.999656619089848 0.9633233595874798 0.7662934789311847 0.8507016539453522 0.7374395263183565 0.7527435633895495 0.5814384812158797 0.7488513946277892 0.720843596115814 0.9917027430259747 1.0 13.04579085340685 -5.676687476212094 5.8509737071083965 0.8160784669637281 0.9887203403255609 0.26541280579987947 0.11582445731163361 0.26348303811632534 14.011915832029976 0.019006359139279373 0.07587446387493689 2.1052928901148316e-06 5.676687476212094 0.1726418733618328 SDSLS(ph)PPR ddPTM_A549_MK2206_60min_R1 4 SDSLSPPR 8 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SDSLS(1)PPR;S(0.002)DS(0.031)LS(0.967)PPR;SDSLS(1)PPR;S(0.004)DS(0.132)LS(0.864)PPR 134.77 3.0336999999999996e-09 29315000.0 4292.2 4382.4 4266.5 3525.9 4823.2 4014.2 3573.3 4725.3 5106.3 5904.7 6839.0 True False 5016.618425785149 4605.445441256165 4871.553854879692 4389.745658283665 4113.713669254405 4438.979979589698 4222.52235645561 5395.125745624334 3949.731203085518 4570.824169007749 5140.687553202203 0.9758652658553875 0.8958812208665301 0.9476463613987075 0.8539218952432216 0.8002263562374877 0.8634992758555415 0.8213925302317477 1.0494949731507486 0.7683274196707748 0.8891464656630458 1.0 12.327745613586735 -11.166304519326067 1.5669792492338708 0.9999319885138055 0.869638135830716 0.0 0.08479871946248765 0.44712815797655175 1.9722790472907243 0.0595376331011477 0.012641919632478738 6.818604184615944e-12 11.166304519326067 -0.13029385268308946 SDSLS(ph)PPR ddPTM_A549_PD325901_60min_R1 3 SDSLSPPR 8 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SDSLS(1)PPR;S(0.014)DS(0.045)LS(0.941)PPR;SDS(0.006)LS(0.993)PPR 123.35 5.149499999999999e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SDSPES(ph)DAER ddPTM_A549_MK2206_60min_R1 2 SDSPESDAER 10 0 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 SDSPES(1)DAER;SDSPES(1)DAER 131.17 1.1406e-06 50357000.0 4142.700000000001 4150.3 3566.6 3563.8 3209.8 1559.33 1189.15 1829.42 2713.3 4988.3 4780.7 True False 4841.886480709225 4361.5325426354175 4072.397510562268 4436.931159985061 2737.642671996349 1724.3372656005179 1405.2031623930807 2088.7458873637793 2098.7418822497575 3861.43956547519 3593.520249392272 1.3473936821499959 1.2137214318948195 1.1332613225850008 1.2347032581033666 0.7618275345628935 0.4798462638111289 0.3910380531821757 0.5812534067999264 0.584035078863043 1.0745562282912495 1.0 11.811182100292909 -6.7777990274678315 6.179077201696674 0.7223132255568071 1.225420463162641 0.6268554188214863 0.19842817063210627 0.09884611191287423 13.424688961933738 0.03306730466192309 0.06502426923073742 1.6680189203393862e-07 6.7777990274678315 0.503107237605834 SDSPES(ph)DAER ddPTM_A549_PD325901_60min_R1 2 SDSPESDAER 10 0 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 SDSPES(1)DAER;SDSPES(1)DAER 154.94 1.6756e-08 114037000.0 4108.27 4239.7 4212.9 4176.6 4738.99 2845.87 3626.2799999999997 3858.69 4033.4 4238.11 4161.2 True False 4525.338546051471 4596.994398228443 4498.812728225717 4434.579096253185 4406.139691027966 2822.694178265191 3764.280069776554 3781.7254008662553 3863.890224526325 3970.5150113196228 3649.3987800201508 1.2400230336095206 1.259658008161843 1.2327544890013025 1.215153334442858 1.2073604329433236 0.7734682747522608 1.0314795111965727 1.0362598413663562 1.058774460516751 1.0879915434447804 1.0 11.833443091523925 -7.034022440728316 24.990159088946267 1.012602610183897 1.2348558531255125 0.6872277016013548 0.07810822374856473 265.734940963473 195187.26377957803 0.01085870929975594 0.018814985445930577 9.246503944585082e-08 7.034022440728316 0.22225324294161553 SDSPES(ph)DAEREK ddPTM_A549_MK2206_60min_R1 4 SDSPESDAEREK 12 1 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 SDSPES(1)DAEREK;SDSPES(1)DAEREK;SDSPES(1)DAEREK;SDSPES(1)DAEREK 262.3 1.2219999999999996e-76 385747000.0 21100.2 23532.3 20612.6 18399.199999999997 27088.3 20037.6 16150.6 20474.5 26082.2 28274.2 29657.200000000004 True False 24661.397909638832 24729.993555419962 23535.776629343272 22907.00482597147 23103.64695365404 22157.9655321176 19084.954963247423 23376.823075526503 20174.623344714786 21887.038582715264 22292.498742919768 1.106264407325421 1.109341480316304 1.0557711318395107 1.0275655990895536 1.0363865989222898 0.9939650905735771 0.8561155563285124 1.048640771279672 0.9049960516930552 0.9818118119067617 1.0 14.4442707153923 -6.6003065624227535 0.900078402674546 0.9557182332150277 1.1098224691985779 0.5428617088055234 0.049757898594399635 0.3813651067258802 0.5504682039673474 0.008591760297444535 0.036382206465786465 2.5101139515395115e-07 6.6003065624227535 0.15410423598355016 SDSPES(ph)DAEREK ddPTM_A549_PD325901_60min_R1 3 SDSPESDAEREK 12 1 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 SDSPES(1)DAEREK;SDSPES(1)DAEREK;SDS(0.003)PES(0.997)DAEREK 313.99 6.873099999999998e-130 334948000.0 20050.8 21592.9 21497.7 19642.6 24914.3 16808.1 17537.800000000003 19221.6 19387.0 20417.9 21679.0 True False 22086.342455381196 23412.609463289155 22956.6631981718 20855.878790418705 23164.40551766898 16671.2204063078 18205.21057605239 18838.210108946507 18572.231810108562 19128.710309459395 19012.620434503726 1.1616674582794142 1.2314246499551642 1.2074434072491398 1.0969492007829635 1.2183699557600527 0.876850219765246 0.957532952323286 0.9908266024581912 0.976837036961199 1.0061059376510242 1.0 14.214669766208543 -7.2496235583906055 24.991215130616144 0.9793136567487015 1.182410078857993 0.8376765018984619 0.04701414558403188 227.11888094469722 480370.713849045 0.006765126557239976 0.011656579018989992 5.6282896768527275e-08 7.2496235583906055 0.20309642210929146 SDSPES(ph)DAEREKDKK ddPTM_A549_PD325901_60min_R1 2 SDSPESDAEREKDKK 15 3 O75400-2;O75400-3;O75400 O75400-2 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 SDS(0.018)PES(0.981)DAEREKDKK;S(0.001)DS(0.052)PES(0.947)DAEREKDKK 76.71300000000001 0.00017713 255010000.0 4450.9 3790.7 4481.8 5156.6 4965.6 5424.9 5141.3 5725.5 4589.6 5652.9 5192.5 True False 4902.752091420601 4110.155592462809 4785.961899252775 5475.111470511701 4616.833386390027 5380.72141301986 5336.954984927311 5611.300410932143 4396.71507276393 5295.974929270052 4553.85541796949 1.0766156676987078 0.9025661149109294 1.0509692249708662 1.2023024378215739 1.0138295933094463 1.1815749335799202 1.1719640820979327 1.2322087321415565 0.9654928997996982 1.1629651016965012 1.0 12.152872772208285 -8.832964062291566 24.99999984732829 0.9837046832323184 1.1006482534328388 0.0 0.10523919976729118 46.23728171702831 16160.392778169082 0.016316725371350198 0.017370405496758508 1.4690478357817361e-09 8.832964062291566 0.11694357020052037 SDSPS(ph)VGETER ddPTM_A549_MK2206_60min_R1 1 SDSPSVGETER 11 0 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 S(0.083)DS(0.336)PS(0.581)VGETER 75.819 0.0012856 10971000.0 247.05 302.52 345.91 234.64 243.57 315.72 486.14 287.23 454.84 450.91 344.0 True False 288.74600020740445 317.91697583260634 394.9652394096879 292.12681053338974 207.74117565522795 349.1292808420255 574.4653453019146 327.94573210498334 351.8194662302287 349.04911782940445 258.5753060829883 1.116680492740993 1.2294947288221432 1.5274669704265034 1.1297552537349924 0.8034068635639731 1.3502034905451274 2.2216558649940965 1.2682793924634512 1.360607366417713 1.349893472493383 1.0 8.014440694262843 SDSQASLTVPLS(ph)PQVVR ddPTM_A549_MK2206_60min_R1 2 SDSQASLTVPLSPQVVR 17 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 SDSQASLTVPLS(1)PQVVR;SDSQASLTVPLS(1)PQVVR 190.55 1.1642e-39 28751000.0 5052.6 6299.799999999999 5325.4 4635.9 7076.1 5137.6 4966.4 5103.5 8257.8 7996.8 7813.9 True False 5905.355355790045 6620.432911378604 6080.621797439661 5771.695708113455 6035.2150636529905 5681.257421937125 5868.7305938771315 5826.936753813258 6387.42148499688 6190.317325981193 5873.492977330998 1.0054247751009528 1.1271713334689348 1.0352650153678715 0.9826683594225049 1.027534226557547 0.9672706588505657 0.9991891735510289 0.992073503161164 1.0874996377197372 1.0539413854537654 1.0 12.520003016674641 -5.977653661779268 24.890345587896768 1.025606928324376 1.070028103110479 0.14565277578644686 0.04242763503955863 362.43446656036593 403690.9190877037 0.006564767823944339 0.02040891890142185 1.052801119844105e-06 5.977653661779268 0.04442117478610297 SDSSGLTSLKKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SDSSGLTSLKKSPK 14 2 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 SDSSGLT(0.003)S(0.01)LKKS(0.987)PK;SDSSGLTS(0.001)LKKS(0.998)PK 70.235 0.00050262 33497000.0 7086.4 8531.6 8623.3 8434.3 9283.1 8241.9 7423.1 7801.9 11028.2 13177.2 11543.8 True False 8282.411074154023 8965.821998590063 9846.2136075903 10500.703878630118 7917.568287248209 9114.052387469555 8771.781183837256 8907.843217316673 8530.330308416604 10200.461368037146 8677.155867327907 0.9545075829903878 1.0332673672889836 1.1347282171874133 1.2101550368788945 0.9124612267321632 1.050350198477671 1.010905107382667 1.026585594809628 0.9830790686307543 1.1755535481902475 1.0 13.083006529118846 -6.780399231546073 24.999991561130564 0.9958494458738603 1.0832836722432215 0.049687878100313276 0.08602168675545947 235.11852503213575 310021.0263557447 0.00949730709766452 0.017967852529470425 1.6580620089319056e-07 6.780399231546073 0.08743422636936127 SDSSGLTSLKKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SDSSGLTSLKKSPK 14 2 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 SDSSGLTS(0.001)LKKS(0.999)PK;SDSSGLTSLKKS(1)PK 112.82 1.2957e-06 64554000.0 12150.2 11129.0 13162.7 13629.1 16612.4 15405.7 14737.0 15334.0 15772.6 14453.900000000001 14525.1 True False 13383.67935949551 12066.879887228893 14055.999975745137 14470.938553068096 15445.602333668789 15280.241086943557 15297.824599395834 15028.151340709717 15109.732472693991 13541.278287281988 12738.604782195205 1.0506393430308734 0.9472685661851143 1.1034175418795675 1.1359908561802765 1.2125034568351758 1.1995223455162694 1.2009026781942131 1.1797329140562254 1.1861371579572764 1.0630111004156972 1.0 13.636919652117315 -5.874372924992408 6.228894930616187 1.1235499796532118 1.0000328414077186 0.37516369401464 0.0682659329335545 0.22828979298048752 11.498315072778768 0.012618284448040687 0.04025415004158348 1.335448285928687e-06 5.874372924992408 -0.12351713824549315 SDSSS(ph)PQR ddPTM_A549_MK2206_60min_R1 1 SDSSSPQR 8 0 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3;E9PS88 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 S(0.001)DS(0.053)S(0.445)S(0.501)PQR 48.794 0.034726 10510000.0 371.52 358.13 172.97 226.82 0.0 0.0 0.0 0.0 0.0 457.2 639.01 True False 434.2234932080745 376.357287303092 197.49974693039732 282.390910182337 0.0 0.0 0.0 0.0 0.0 353.91820246080965 480.32618122119294 0.9040179573474304 0.7835452282576646 0.41117839220895513 0.5879148820586451 0.0 0.0 0.0 0.0 0.0 0.7368288806598038 1.0 8.907870637718261 -10.907009003046468 1.1883440529260714 0.9956465106091699 0.26646726596927467 0.29374829522850043 0.33134401085489096 0.4191078630969399 1.0612431579048194 0.2457563129612365 0.05992999180944419 1.2387709061957181e-11 10.907009003046468 -0.7291792446398953 SDSSS(ph)PQR ddPTM_A549_PD325901_60min_R1 1 SDSSSPQR 8 0 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3;E9PS88 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 S(0.001)DS(0.147)S(0.147)S(0.704)PQR 57.858999999999995 0.015816999999999998 23648000.0 511.88 609.02 496.36 285.66 495.88 353.81 161.42 322.22 515.13 311.35 638.3 True False 563.8456807738605 660.3442527558756 530.0459744551537 303.30456941906897 461.0510994931304 350.9286886653317 167.56292643241332 315.7930693232999 493.48087751282935 291.69130786467673 559.7931465170776 1.0072393423928052 1.1796218958099203 0.9468604211269734 0.541815438981649 0.8236097607869965 0.6268899339849741 0.2993300783958445 0.5641245722426257 0.8815414775675084 0.5210698088740858 1.0 9.128750014044698 -5.999004359273226 21.23755608661702 0.8144428625518116 1.0858840195428054 0.19944171863303306 0.22914058223548855 7.212236727869942 153681.4543976663 0.03546731086435075 0.10837982037633635 1.0022951773917946e-06 5.999004359273226 0.2714411569909938 SDSYS(ph)QSLK ddPTM_A549_PD325901_60min_R1 2 SDSYSQSLK 9 0 Q9H8W4 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 1 S(0.002)DS(0.109)YS(0.843)QS(0.045)LK;S(0.008)DS(0.283)YS(0.682)QS(0.028)LK 111.33 0.00032456 42551000.0 19859.5 21740.0 19423.6 20658.0 23175.0 23076.0 21299.0 21999.0 20977.0 23411.0 26218.0 True False 21875.621820208813 23572.106096536645 20741.802299595296 21933.997742277992 21547.267949409725 22888.07670682342 22109.54510026002 21560.212687118357 20095.409639482503 21932.82546465373 22993.35220959538 0.9513889762920203 1.0251704876116212 0.9020782228934636 0.953927793665714 0.9371085935185132 0.995421480877937 0.9615624941818384 0.9376715709213136 0.8739660688142925 0.9538768103374209 1.0 14.488929191999855 -8.260215797053691 20.936964218995573 0.9386100978867382 0.9612954155747364 0.050695064803957246 0.0400798138378226 34.80985849178396 595608.942828595 0.008475418408924986 0.010626716718476283 5.492678797296814e-09 8.260215797053691 0.022685317687998197 SDT(ph)FINLR ddPTM_A549_MK2206_60min_R1 1 SDTFINLR 8 0 P17655-2;P17655 P17655-2 CAPN2 Calpain-2 catalytic subunit 1 S(0.06)DT(0.94)FINLR 59.931000000000004 0.012232 5996700.0 977.19 1102.2 889.9 902.43 1210.7 1032.8 1105.7 962.15 1657.1 1437.2 1683.5 True False 1142.115781998273 1158.2972721231613 1016.1012013260134 1123.525390511622 1032.6076338045925 1142.0902104828458 1306.5913775873757 1098.5377089607962 1281.7694958449383 1112.5355218212496 1265.440487763694 0.9025440493188563 0.9153312884512824 0.8029624554859022 0.8878532031934062 0.8160064766296776 0.9025238417186773 1.032519024182958 0.8681069711165549 1.0129038135251238 0.8791685840456549 1.0 10.305423945388391 -7.919562268928752 0.9800153431660343 1.0035331851136602 0.8640667683544985 0.15826622843508875 0.06622778288418074 0.2737012510542014 0.5273672405591622 0.009937179097402351 0.015671362108329815 1.2034768235065128e-08 7.919562268928752 -0.13946641675916172 SDT(ph)FINLR ddPTM_A549_PD325901_60min_R1 2 SDTFINLR 8 0 P17655-2;P17655 P17655-2 CAPN2 Calpain-2 catalytic subunit 1 S(0.234)DT(0.766)FINLR;S(0.495)DT(0.505)FINLR 112.36 0.0011445000000000001 10278000.0 844.22 989.0 1083.7 906.21 1080.8 1108.1 965.16 1176.7 966.04 908.49 1015.8 True False 929.9245929180838 1072.3465008958012 1157.2463988174911 962.1845335477657 1004.8883365575844 1099.0760009893838 1001.8896919558176 1153.2297953967081 925.4406982945928 851.1277863561264 890.8630396867422 1.0438468670168166 1.2037164559805678 1.2990171858790083 1.0800588762623966 1.1279941941591125 1.2337205069994333 1.124628194596687 1.2945085204143423 1.0388136639050705 0.9553968999044027 1.0 9.799059840205711 -8.907952672045312 8.533531922166468 1.0170463530878697 1.1763130828149724 0.49779808651830093 0.07920191490506837 0.15859789984177938 13.161505314625044 0.012732570669490543 0.013525695595367444 1.2360821301859325e-09 8.907952672045312 0.15926672972710265 SDT(ph)SSPEVR ddPTM_A549_MK2206_60min_R1 1 SDTSSPEVR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.067)DT(0.503)S(0.395)S(0.035)PEVR 65.347 0.0062125 3666900.0 446.91 554.58 407.36 376.78 321.34 390.49 452.89 376.8 592.87 450.22 549.4 True False 522.3374820995386 582.8057531972994 465.1297734264132 469.0911169142968 274.07131167652386 431.81139261371635 535.1742506968857 430.21255390160377 458.5858916188454 348.51498930863005 412.96881733137735 1.2648351647344862 1.4112584987975987 1.1263072510706795 1.13589960604189 0.6636610324420733 1.04562711394071 1.2959192758310547 1.0417555414514252 1.1104613045174878 0.8439256783617447 1.0 8.68988903974924 -5.932601555360189 3.334696382890678 1.0474530117702519 1.3376095605430478 0.361285100254231 0.15883792476553907 0.18966380164627555 4.231230158151771 0.020339973008189755 0.07201064680681578 1.1678806008939095e-06 5.932601555360189 0.29015654877279595 SDTDTGVCS(ph)GTDEDPDDKNAPFR ddPTM_A549_MK2206_60min_R1 2 SDTDTGVCSGTDEDPDDKNAPFR 23 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 SDTDT(0.008)GVCS(0.949)GT(0.043)DEDPDDKNAPFR;SDT(0.001)DT(0.005)GVCS(0.802)GT(0.192)DEDPDDKNAPFR 96.679 1.0230000000000001e-07 19034500.0 3922.9 3972.5 3016.8 3448.8 4355.9 3155.6000000000004 3196.8 3573.1 4885.2 5007.299999999999 4579.6 True False 4584.989614303283 4174.683282080621 3444.6276032816268 4293.756154822516 3715.1528802258376 3489.5234974822497 3777.61717995055 4079.5978671598214 3778.7100000613655 3876.1474522791154 3442.3589294699213 1.3319324649882782 1.2127391035087292 1.0006590462697784 1.2473295907825912 1.0792462251453607 1.0137012348156242 1.0973920086050568 1.1851169360157416 1.097709471174535 1.126014901902165 1.0 11.749181817475677 -2.0000000000000004 0.44995310047538306 1.0569874412379214 6.911075672486868 0.3964932101601438 0.07982662647777426 48.388256380007306 0.5156686365538946 0.01600971172850264 262.71192463434875 0.00999999999999999 2.0000000000000004 5.854088231248947 SDTDTGVCS(ph)GTDEDPDDKNAPFR ddPTM_A549_PD325901_60min_R1 1 SDTDTGVCSGTDEDPDDKNAPFR 23 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 SDTDT(0.001)GVCS(0.97)GT(0.029)DEDPDDKNAPFR 126.59 4.6228000000000004e-17 13106000.0 4576.8 4148.6 4744.9 4569.2 4911.0 4600.7 4685.6 4653.5 4707.5 5236.3 5840.0 True False 5041.433366737916 4498.217081512968 5066.917447401601 4851.429106593891 4566.068302030251 4563.233424557224 4863.9130720587 4560.68229189987 4509.660145772221 4905.679124367454 5121.71702281017 0.984324855177531 0.8782634927856475 0.9893005460542796 0.9472270890772528 0.8915112415806512 0.8909577401942211 0.9496645461661958 0.8904596391382682 0.8804977170132434 0.9578192435309163 1.0 12.322411830243654 -10.977387691240242 1.2666236653079563 0.9997007152956183 0.9177799424589747 0.197247218213644 0.04046694697311103 0.3847204966391432 1.104438719408271 0.026853565444524996 0.006282343760434577 1.053446073564664e-11 10.977387691240242 -0.08192077283664367 SDTLTDS(ph)QIDRDLHK ddPTM_A549_MK2206_60min_R1 2 SDTLTDSQIDRDLHK 15 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 SDTLT(0.002)DS(0.998)QIDRDLHK;SDTLT(0.001)DS(0.999)QIDRDLHK 113.29 5.740999999999999e-07 12921400.0 958.25 930.16 941.53 860.1199999999999 1276.5 953.21 1087.85 1142.65 1646.81 1417.0900000000001 1199.83 True False 1119.9791730368152 977.5011709654146 1075.053111680505 1070.8494386122545 1088.7285409693252 1054.0780495104113 1285.4982636415182 1304.624136718863 1273.8101644151855 1096.968384788252 901.8790973766044 1.2418285070522452 1.0838494581022895 1.192014666719332 1.187353650536034 1.2071779289887419 1.1687576001889 1.4253554244474558 1.4465621173766725 1.412395705943799 1.2163142354436702 1.0 9.816790233780756 SDTLTDS(ph)QIDRDLHK ddPTM_A549_PD325901_60min_R1 2 SDTLTDSQIDRDLHK 15 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 SDTLTDS(1)QIDRDLHK;SDTLTDS(1)QIDRDLHK 155.79 8.2228e-20 19082100.0 1743.7 1918.73 1869.3400000000001 1983.6799999999998 2080.8 1772.8400000000001 2159.0 1934.32 2168.14 2283.2 2303.6 True False 1920.7191403559052 2080.4281108835203 1996.2046536545995 2106.20740833585 1934.6517863703014 1758.4025788232298 2241.161926450131 1895.738470155315 2077.0206157099497 2139.0383623466505 2020.2718037235472 0.9507231337960776 1.0297763434846239 0.9880871722188125 1.0425366549460895 0.9576195553511957 0.870379211144922 1.1093368339445528 0.938358129169201 1.0280896916354567 1.0587874158339514 1.0 10.980333688285024 -7.774649533348437 24.999791177696576 1.0133421946969416 0.9788811546337352 0.15427019765188754 0.05803060805458379 459.1480008014662 868921.1609782669 0.008354816151103442 0.011580018525937723 1.6801593249716536e-08 7.774649533348437 -0.034461040063206494 SDTPEVHPPLPIS(ph)QSPENESNDRR ddPTM_A549_MK2206_60min_R1 3 SDTPEVHPPLPISQSPENESNDRR 24 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 SDTPEVHPPLPIS(0.467)QS(0.467)PENES(0.066)NDRR;SDTPEVHPPLPIS(0.544)QS(0.45)PENES(0.006)NDRR;SDTPEVHPPLPIS(0.499)QS(0.499)PENES(0.002)NDRR 104.87 1.9952000000000004e-11 37411400.0 1624.6100000000001 2073.29 1296.92 1728.62 2178.83 1445.01 1564.1200000000001 1773.38 2579.56 2485.75 2890.92 True False 1898.804450098973 2178.8116052624123 1480.8427576398842 2152.1319776007003 1858.3269932786477 1597.9199990799927 1848.300357702783 2024.762045748477 1995.2937787108615 1924.2173485716482 2173.0247786669547 0.8738070862053388 1.0026630283521238 0.6814661168053083 0.990385382959567 0.8551798449434347 0.7353436623305507 0.8505657072335022 0.9317712644724513 0.9182103206088968 0.8855017979832067 1.0 11.085488910104486 -9.335199841702662 0.7367206991490152 0.9863503092786692 0.8591502862952035 0.07759648524911644 0.09493553472204962 0.5854348792508084 0.691670510089339 0.029061992740189627 0.020594537723307122 4.6216830454936717e-10 9.335199841702662 -0.12720002298346567 SDTPEVHPPLPIS(ph)QSPENESNDRR ddPTM_A549_PD325901_60min_R1 3 SDTPEVHPPLPISQSPENESNDRR 24 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 SDTPEVHPPLPIS(0.825)QS(0.175)PENESNDRR;SDTPEVHPPLPIS(0.469)QS(0.469)PENES(0.063)NDRR;SDTPEVHPPLPIS(0.5)QS(0.5)PENESNDRR 131.7 3.3452e-23 41670600.0 7975.3 7451.700000000001 6609.6 8003.5 8453.4 7692.9 7084.5 7585.0 7855.0 8668.1 8750.4 True False 8784.946584894451 8079.680910743429 7058.167202753614 8497.85801773269 7859.662346646824 7630.251572972862 7354.104524287154 7433.711224682615 7524.881666498313 8120.794686692804 7674.156273355845 1.1447442913555455 1.0528428954197269 0.9197320137015057 1.107334502326553 1.0241728297787007 0.9942788889333128 0.9582948616540572 0.9686682105356599 0.9805484014736834 1.0582003281439105 1.0 12.905792428349203 -7.167274228585587 3.6417913618144984 0.9861629599022408 1.047820201398789 0.19600223040135756 0.05725266236907095 0.2776067575553006 6.895444564933323 0.007623303804452347 0.013577219537716675 6.803396330159149e-08 7.167274228585587 0.061657241496548165 SDTPEVHPPLPISQS(ph)PENESNDRR ddPTM_A549_PD325901_60min_R1 1 SDTPEVHPPLPISQSPENESNDRR 24 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 SDTPEVHPPLPIS(0.401)QS(0.446)PENES(0.153)NDRR 77.065 5.914500000000001e-06 18825000.0 1518.8 1708.9 1652.6 1467.6 1709.2 1801.4 1312.9 1608.6 1462.8 1949.8 1897.3 True False 1672.9874579185353 1852.9150003850727 1764.755373891102 1558.2503188385685 1589.1516884198954 1786.7299956522668 1362.863127946447 1576.5152110777124 1401.323603024026 1826.6892952450512 1663.9441279756404 1.005434875961789 1.1135680394745795 1.0605857157223835 0.9364799530464648 0.9550511112132487 1.0737920616517382 0.8190558234695721 0.9474568193558913 0.8421698658409166 1.0978068701545929 1.0 10.700391276046288 -6.5099717889680315 0.9292573595799055 0.9242030312401701 1.073238201975128 0.11507075583051007 0.08791229805010982 0.6066609643468063 0.9180079796387774 0.01289202891123732 0.05845571485240388 3.090496179376558e-07 6.5099717889680315 0.14903517073495798 SDTPEVHPPLPISQSPENES(ph)NDRR ddPTM_A549_MK2206_60min_R1 1 SDTPEVHPPLPISQSPENESNDRR 24 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 SDTPEVHPPLPIS(0.29)QS(0.29)PENES(0.42)NDRR 83.693 3.6796e-06 4177500.0 678.01 1190.5 1127.6 984.52 1257.2 1269.9 1148.9 956.36 1473.6 1682.5 1673.4 True False 792.4415122470035 1251.091364963368 1287.5106355941264 1225.7274441967827 1072.2675454027692 1404.2799751086036 1357.6402583975196 1091.9269587296653 1139.831952855652 1302.422081453002 1257.8485965095138 0.6299975326490018 0.9946279452353035 1.0235815655134677 0.9744634192049296 0.8524615350196156 1.1164141527091829 1.0793351935717257 0.8680909306252953 0.9061757957345948 1.0354362878546577 1.0 10.296742564422852 -5.2586759322339205 24.804534029661134 0.9680068043536614 0.6299973970523096 0.61143512391867 0.08033166926010656 119.97812278966833 1076849.0408035328 0.010863941557038076 0.10352524992409474 5.512188589716709e-06 5.2586759322339205 -0.33800940730135176 SDTS(ph)SPEVR ddPTM_A549_PD325901_60min_R1 1 SDTSSPEVR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SDT(0.041)S(0.58)S(0.379)PEVR 95.50200000000001 0.00091791 3961500.0 880.7 867.5 1010.6 1029.9 1183.7 520.39 967.26 1049.6 889.05 837.13 1137.8 True False 970.1080156629268 940.6072694915154 1079.1853932314818 1093.5145839273932 1100.5609955433138 516.1521163747548 1004.0696086049815 1028.6649046047294 851.6863202546556 784.2734689345009 997.8578131084612 0.9721906296859169 0.9426265517342569 1.0815021730096739 1.0958621254073748 1.1029236641590432 0.5172601843612084 1.0062251308903116 1.0308732277199895 0.8535147082744567 0.7859571360085699 1.0 9.962690447283673 SDTSISDFLS(ph)EEDDIVPSKK ddPTM_A549_MK2206_60min_R1 2 SDTSISDFLSEEDDIVPSKK 20 1 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3 Q4AC94 C2CD3 C2 domain-containing protein 3 1 S(0.004)DT(0.006)S(0.006)IS(0.064)DFLS(0.919)EEDDIVPS(0.002)KK;S(0.004)DT(0.004)S(0.004)IS(0.008)DFLS(0.975)EEDDIVPS(0.007)KK 46.621 0.0078024 5451200.0 1241.68 993.46 994.5699999999999 1201.0500000000002 1583.56 1245.49 1043.35 1444.96 1793.3600000000001 1804.53 1407.37 True False 1451.2452278386158 1044.0228705892541 1135.6149812370074 1495.3073039171843 1350.6204217292475 1377.2869251106488 1232.913189658849 1649.7875050044106 1387.1668234074468 1396.8854196994857 1057.8811875639976 1.371841417447289 0.9868999305993377 1.0734806465856612 1.4134926695884023 1.276722223257742 1.301929688609127 1.1654552554223039 1.5595206006105529 1.3112690155703604 1.3204558660468473 1.0 10.04696188967779 -10.693971307035028 1.0482239351907514 1.0059039083166332 1.2690698109571328 0.0 0.17606376061761 0.5059724999721041 1.0213946190680692 0.09297546748530319 0.026714598986675102 2.02315283991137e-11 10.693971307035028 0.26316590264049955 SDTSISDFLS(ph)EEDDIVPSKK ddPTM_A549_PD325901_60min_R1 2 SDTSISDFLSEEDDIVPSKK 20 1 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3 Q4AC94 C2CD3 C2 domain-containing protein 3 1 S(0.004)DT(0.003)S(0.003)IS(0.246)DFLS(0.743)EEDDIVPS(0.001)KK;SDTSISDFLS(1)EEDDIVPSKK 120.52 9.275100000000001e-15 13220500.0 1417.78 1680.9 1936.7 1697.75 2268.63 2280.3999999999996 1726.08 2211.9 2182.0 2211.41 1456.68 True False 1561.7119818855274 1822.555342119063 2068.136108323186 1802.6161616299953 2109.2892551486243 2261.829178464211 1791.7669189472176 2167.781919298018 2090.298128109396 2071.7811951984077 1277.5175946553293 1.2224582960102972 1.426638153356145 1.6188709392148632 1.4110303992457625 1.651084309110987 1.7704876926367863 1.402537958336794 1.6968704997623765 1.6362186609831804 1.6217241968846374 1.0 10.319127445529242 -10.742026064500935 0.9452493393877346 0.9929699584606898 1.5467508831084782 0.0 0.23623170207128127 0.29594849928784583 0.46033984537705874 0.11278748638988613 0.02754146472942629 1.8112313869813495e-11 10.742026064500935 0.5537809246477884 SDTSS(ph)PEVR ddPTM_A549_MK2206_60min_R1 3 SDTSSPEVR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SDT(0.015)S(0.085)S(0.899)PEVR;SDT(0.01)S(0.094)S(0.895)PEVR;SDT(0.016)S(0.256)S(0.728)PEVR 107.15 0.00049736 201986800.0 1323.33 1408.01 1133.4 870.92 1681.04 1282.6399999999999 1032.74 1130.09 1259.91 1622.58 1901.5 True False 1546.6757516877726 1479.6716949030429 1294.1331628080727 1084.295439097085 1433.7612428602226 1418.3681134524747 1220.3754899969138 1290.2837182554767 974.542396662843 1256.0380510692487 1429.3050712697745 1.0821173049597645 1.0352385397950932 0.9054282313980618 0.7586172195791708 1.0031177190090632 0.992348059181247 0.8538243615918534 0.9027350033182256 0.6818295241876342 0.8787753407699045 1.0 10.481098163191337 -7.776522062577152 22.520763558153753 0.8510305087340022 0.9560455700459496 0.17564843270213992 0.1051021854269507 124.10746587149306 185311.0286142931 0.021542120633644544 0.029851644920776813 1.672930647754877e-08 7.776522062577152 0.10501506131194738 SDTSS(ph)PEVR ddPTM_A549_PD325901_60min_R1 3 SDTSSPEVR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.004)DT(0.047)S(0.258)S(0.69)PEVR;SDT(0.016)S(0.065)S(0.919)PEVR;S(0.001)DT(0.013)S(0.131)S(0.855)PEVR 123.86 9.4805e-05 230847800.0 2018.9099999999999 2138.52 2331.51 2076.39 2643.91 1905.27 1937.65 2439.2799999999997 2329.03 2118.11 2582.43 True False 2223.86825695701 2318.7405855365932 2489.7402891085826 2204.6438944761635 2458.21088259434 1889.7541128102548 2011.3883310727638 2390.6266468218573 2231.148968519994 1984.3721731210858 2264.8074813725475 0.9819237508034339 1.0238135491019134 1.0993165245108245 0.9734354520676861 1.0853950734499445 0.8343994482325721 0.888105654726024 1.055554022354721 0.985138466236364 0.8761769772671765 1.0 11.14517270470244 SDVEAIFSK ddPTM_A549_MK2206_60min_R1 2 SDVEAIFSK 9 0 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;G3V555;A0A0G2JNQ3;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;G3V2H6;P07910-2;P07910;B2R5W2;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 107.15 0.0013775999999999999 2747000.0 3951.2999999999997 4579.7 4346.6 3716.7 5389.9 4014.1000000000004 4141.3 4007.5 6269.4 5825.4 5806.6 False True 4618.182839989947 4812.78716851973 4963.013239334363 4627.291666849004 4597.052849957357 4438.86939765607 4893.720604144522 4575.575397454029 4849.390910174556 4509.438094083991 4364.660965992673 1.0580851241305096 1.1026714803322961 1.1370902065484036 1.0601720735934872 1.0532439714734705 1.0170021067481743 1.1212143720380636 1.048323210692583 1.1110578686314159 1.0331703033109219 1.0 12.091653878567804 -10.929683440132301 1.1307370127913072 0.9990285068676228 1.0812168360113827 0.29814682141299353 0.035597667370777054 0.3962857045568289 0.8824909848487801 0.026033140888401477 0.005832743612859419 1.1757542570445166e-11 10.929683440132301 0.08218832914375995 SDVEAIFSK ddPTM_A549_PD325901_60min_R1 1 SDVEAIFSK 9 0 G3V4C1;G3V2Q1;G3V576;G3V575;B7ZW38;A0A0G2JPF8;P0DMR1;O60812;B2RXH8;G3V555;A0A0G2JNQ3;G3V5X6;G3V3K6;G3V251;B4DSU6;G3V4M8;G3V2H6;P07910-2;P07910;B2R5W2;G3V4W0;P07910-4;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC;HNRNPCL3;HNRNPCL4;HNRNPCL1;HNRNPCL2 Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoproteins C1/C2 0 125.56 0.00020096 3824900.0 2779.1 2911.6 2858.3 2655.9 3650.4 3221.6 3131.6 3097.0 3153.4 3676.9 3938.3 False True 3061.2321861347104 3156.9707502610872 3052.28142635419 2819.948911013462 3394.008497196341 3195.3643577180765 3250.7747516772743 3035.227905450499 3020.8735642438924 3444.7399064963224 3453.914066940635 0.8863081497699943 0.9140270108275824 0.8837166667142363 0.8164502232423173 0.982655744010054 0.9251429814953174 0.9411857645192385 0.8787792187716486 0.874623255152287 0.9973438365093897 1.0 11.754016473857579 -10.838121683202113 1.0102699407879117 1.0018146096470588 0.8998597039526862 0.4664914597411344 0.040438030687828856 0.4145565713474296 0.7291955590474329 0.0310502465659644 0.0070977905383485486 1.451704813340768e-11 10.838121683202113 -0.1019549056943726 SDVLELTDDNFESR ddPTM_A549_MK2206_60min_R1 2 SDVLELTDDNFESR 14 0 H7BZJ3 H7BZJ3 PDIA3 0 ; 194.7 1.0111999999999999e-30 7029500.0 3530.3 3918.8 4084.3999999999996 3171.0 5653.6 4066.3 4062.8 4606.7 6607.6 4574.2 4660.9 False True 4126.128332451726 4118.250181451868 4663.629336662513 3947.895142351597 4821.962929278637 4496.5931670085165 4800.958170264983 5259.713832427068 5110.989150168977 3540.8850430801317 3503.469895704072 1.1777262129499537 1.1754775419939059 1.3311458284202813 1.1268528801096525 1.3763391930929079 1.2834684757880195 1.370343777222656 1.5012870065977988 1.4588363257911916 1.0106794545093531 1.0 11.774568784288762 -4.048494697059258 16.121486585483588 1.2566454611015563 1.2406012334916945 0.0 0.16244805294604883 0.0 0.0 0.024981689650003077 0.0 8.943454522462596e-05 4.048494697059258 -0.016044227609861794 SDVLELTDDNFESR ddPTM_A549_PD325901_60min_R1 2 SDVLELTDDNFESR 14 0 H7BZJ3 H7BZJ3 PDIA3 0 ; 214.0 5.7069e-38 8507200.0 5673.5 5250.6 5770.9 6588.1 7184.299999999999 6405.200000000001 7303.700000000001 7576.1 7045.3 6462.1 7071.6 False True 6249.469543390051 5693.086488982302 6162.547977240804 6995.031974339313 6679.699552489505 6353.038174837289 7581.646300237996 7424.988742164526 6749.210541690716 6054.081903171112 6201.838030565825 1.0076802252154076 0.9179676187807332 0.9936647727445672 1.127896591278944 1.0770515965700063 1.0243798924651488 1.2224837641473014 1.1972239045215936 1.0882597237185427 0.976175429499046 1.0 12.598480133161676 -6.065864020871134 6.201233490540092 1.072288107366181 0.9609390890149322 0.30773713503810596 0.07528844686321404 0.22958455440339637 16.972743131591496 0.011286855476525423 0.030707909018715583 8.59282523769065e-07 6.065864020871134 -0.11134901835124877 SDVS(ph)PIIQPVPSIK ddPTM_A549_MK2206_60min_R1 2 SDVSPIIQPVPSIK 14 0 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.03)DVS(0.887)PIIQPVPS(0.083)IK;S(0.002)DVS(0.998)PIIQPVPSIK 127.18 1.2819e-08 27005000.0 3755.5 4237.9 4273.5 3629.9 5244.299999999999 3972.6000000000004 3959.6 3938.0 5412.4 5533.2 5888.6 True False 4389.336586840343 4453.591008465568 4879.546560137903 4519.225662952404 4472.870417082198 4392.977895201541 4679.008066107419 4496.223559619201 4186.500041826771 4283.246277025706 4426.2981029078055 0.9916495646682313 1.0061660794016185 1.102398990463914 1.0209944196897969 1.0105217301437057 0.9924722178823937 1.0570928476402432 1.0157977287308009 0.9458242405943011 0.9676813846342335 1.0 12.111884901888716 -8.611314792282926 7.031996284510462 0.9745131717847269 1.0267304916333049 0.357372415908106 0.0320456607540835 0.19587185999012208 13.239819629510231 0.005910906154058426 0.006703336545898297 2.4472887157944548e-09 8.611314792282926 0.052217319848578025 SDVS(ph)PIIQPVPSIK ddPTM_A549_PD325901_60min_R1 2 SDVSPIIQPVPSIK 14 0 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.006)DVS(0.994)PIIQPVPSIK;S(0.012)DVS(0.987)PIIQPVPSIK 147.51 3.3086e-13 42665000.0 11482.3 10215.1 11949.2 11776.9 13748.099999999999 12382.3 11538.900000000001 12540.8 13122.6 13086.8 14050.0 True False 12647.974643177495 11075.962326896564 12760.14456837683 12504.332365719514 12782.480884370209 12281.462654138486 11978.019153828354 12290.66390593272 12571.102757070741 12260.49721459274 12321.939070288163 1.0264597618142342 0.8988814393348189 1.035563030752628 1.014802320835294 1.0373757581055199 0.9967150936294371 0.972088815364369 0.9974618309523332 1.0202211425783938 0.9950136212048332 1.0 13.588941686471925 -5.7999659929218685 24.99999892181456 1.0090740791099397 0.9626698167769026 0.21950263660429226 0.032659945920438735 132.54507986901984 86008.58540620869 0.003996128419930992 0.01242481498902999 1.5850173010996768e-06 5.7999659929218685 -0.04640426233303718 SDVYYFS(ph)PSGKK ddPTM_A549_MK2206_60min_R1 1 SDVYYFSPSGKK 12 1 Q9UBB5;X6RBL6;Q9UBB5-3 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 1 SDVYYFS(0.988)PS(0.011)GKK 55.656000000000006 0.0075351 4917600.0 2550.6 3269.9 3434.9 3182.1 3469.3 3322.8 3043.3 2924.6 4494.5 4300.5 4434.3 True False 2981.078923817063 3436.3239431278585 3922.020470204208 3961.714642849895 2958.9705657539184 3674.4164905038715 3596.2282168867355 3339.1710062118646 3476.502926241672 3329.0140631730364 3333.1409295459152 0.8943753015037336 1.0309566909299572 1.1766740600249739 1.1885829992161814 0.8877424112268271 1.1023885782724612 1.0789307421743675 1.0018091274246754 1.0430110816572307 0.9987618686217864 1.0 11.702666602427879 -10.177454241002687 0.46327940930761263 0.9952632542592157 1.0538099013652586 0.03382416946608269 0.09148167342737905 3.952140304390568 1.4786291304732455 0.10193162132806861 0.026416061226171735 6.645776917729839e-11 10.177454241002687 0.05854664710604296 SDVYYFSPS(ph)GKK ddPTM_A549_MK2206_60min_R1 1 SDVYYFSPSGKK 12 1 Q9UBB5;X6RBL6;Q9UBB5-3 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 1 SDVYYFS(0.431)PS(0.568)GKK 65.092 0.0025443 5669600.0 3671.2 3772.4 3744.3 3905.6 5488.9 3419.7 3569.1 3436.7 5479.9 5265.0 5741.6 True False 4290.808807777465 3964.399046776825 4275.298042617139 4862.472175329046 4681.490081101865 3781.5703841868544 4217.559270821291 3923.862749452339 4238.7113996021235 4075.632843298692 4315.80225990141 0.9942088514211685 0.9185775455030665 0.9906149042877612 1.126667044156959 1.0847322929037089 0.8762149321162922 0.9772364480196635 0.9091850166327998 0.9821375365095972 0.9443511537045711 1.0 12.075413050045263 -7.222716684856407 24.999102453966117 0.9761000654248047 1.0211256065465257 0.19554739027093604 0.06283307406874461 1067.4062200151923 689110.5119606354 0.009741385111331286 0.016872419879360275 5.988021005493226e-08 7.222716684856407 0.04502554112172108 SDVYYFSPS(ph)GKK ddPTM_A549_PD325901_60min_R1 2 SDVYYFSPSGKK 12 1 Q9UBB5;X6RBL6;Q9UBB5-3 Q9UBB5 MBD2 Methyl-CpG-binding domain protein 2 1 SDVYYFS(0.064)PS(0.936)GKK;SDVYYFS(0.473)PS(0.527)GKK 91.441 0.00011283 24915000.0 9653.9 9061.2 9754.0 9685.9 12339.5 12697.4 10996.3 10726.400000000001 13343.9 11777.9 11532.599999999999 True False 10633.956821174446 9824.819124284171 10415.96509556687 10284.17604472506 11472.816088964017 12593.996584209559 11414.770213906253 10512.453537301992 12783.102287662221 11034.241383971013 10114.16331117475 1.05139263565434 0.9713921776830621 1.0298395205917497 1.0168093719984201 1.1343317025826687 1.2451842230286054 1.1285926341820596 1.0393794537297203 1.2638813408854752 1.0909692719495347 1.0 13.304089358195483 -6.759627397005105 21.878210200665627 1.1308747142898994 1.0149665368048695 0.34024851612493734 0.07466092550353756 11.722988767110188 141519.34475745313 0.014561898019426105 0.029097189293395755 1.7392924149088023e-07 6.759627397005105 -0.1159081774850299 SDY(ph)DGIGSR ddPTM_A549_PD325901_60min_R1 2 SDYDGIGSR 9 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8YF89;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 S(0.095)DY(0.904)DGIGSR;S(0.095)DY(0.903)DGIGS(0.002)R 49.813 0.031132 1979070.0 646.25 385.87 600.69 403.372 595.23 463.63 635.3399999999999 466.59999999999997 416.90200000000004 548.6600000000001 605.1 True False 711.856824255895 418.3886191108828 641.4564356424098 428.2873723157204 553.4230982320234 459.85435099603643 659.5182113713884 457.29329695938117 399.3810587557578 514.0175139650987 530.6765360449373 1.3414137914618776 0.7884061018206654 1.208752209817115 0.8070591843153461 1.042863327549044 0.8665435906084537 1.2427875863641744 0.8617175735100863 0.7525885009582156 0.9686079542841746 1.0 9.05168895092303 SDYDGIGS(ph)RGDR ddPTM_A549_PD325901_60min_R1 2 SDYDGIGSRGDR 12 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 SDYDGIGS(1)RGDR;S(0.001)DY(0.003)DGIGS(0.996)RGDR 56.482 0.0045353 7333900.0 1302.47 1200.1 998.2 1236.49 1887.65 1418.9099999999999 1665.53 1577.5900000000001 1639.71 1647.9099999999999 1433.78 True False 1434.6957955722628 1301.2366387513155 1065.943854664224 1312.8651790274619 1755.0679760389755 1407.3548673981106 1728.9126555629875 1546.123729854587 1570.798690945123 1543.86068136592 1257.4341494802684 1.1409709177735163 1.0348348176237712 0.8477134608637816 1.0440826500299079 1.3957533893638825 1.1192274903459625 1.374952840494744 1.2295862415488255 1.2492095046045766 1.2277865063582372 1.0 10.296267134231023 -6.540578850376994 24.992484166845298 1.166813589037577 0.9997656348062284 0.32294213015107776 0.1295314714381423 284.70098957415695 401995.86305437365 0.02143866907430654 0.04463486340515812 2.880190075847258e-07 6.540578850376994 -0.16704795423134866 SDYDRS(ph)R ddPTM_A549_MK2206_60min_R1 1 SDYDRSR 7 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 SDYDRS(1)R 78.149 0.014041999999999999 81819000.0 665.21 593.24 495.02 505.47 681.87 312.81 552.9 636.18 710.48 927.31 783.1 True False 777.4811851769575 623.4333820670881 565.2212795599544 629.3101726914107 581.5678262677269 345.9113465735272 653.3547731464773 726.3604632195388 549.5574144034226 717.8300269552346 588.6346575395004 1.3208212856966965 1.0591176956400203 0.9602242618920636 1.0691014615448136 0.9879945375603385 0.5876503229005248 1.109949549823498 1.2339750198463235 0.9336137574715341 1.2194831170080478 1.0 9.201228677327215 -5.239143906826303 2.20928184370129 0.9769863080093495 1.4235750024666682 0.19819859407254314 0.16670323458252861 0.6408895352932946 3.3596654933140058 0.020340764159828276 0.5703462390812294 5.7657537903637695e-06 5.239143906826303 0.44658869445731875 SDYDRS(ph)R ddPTM_A549_PD325901_60min_R1 1 SDYDRSR 7 1 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 SDYDRS(1)R 116.73 0.0058933 81943000.0 1291.6 1176.9 919.65 1073.8 1314.7 1050.5 1386.3 1321.7 1098.6 887.15 1560.5 True False 1422.7222811743345 1276.0814933309086 982.0629793047024 1140.1261872232599 1222.3600074687797 1041.945076292165 1439.056405112467 1295.3376566464087 1052.4296624844108 831.1351975980336 1368.5683928245337 1.0395697347927455 0.9324206959779737 0.7175841444634431 0.8330794377548052 0.8931669135993998 0.7613394272110406 1.0515049248963406 0.9464909926591342 0.7690004153262251 0.6073026397187844 1.0 10.418451818395486 SDYDRS(ph)RERDER ddPTM_A549_MK2206_60min_R1 7 SDYDRSRERDER 12 3 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 SDYDRS(1)RERDER;SDYDRS(1)RERDER;S(0.024)DY(0.002)DRS(0.973)RERDER;SDYDRS(1)RERDER;SDYDRS(0.999)RERDER;S(0.027)DYDRS(0.973)RERDER;SDY(0.002)DRS(0.998)RERDER 134.9 1.1937999999999999e-08 398825300.0 3457.8500000000004 4474.589999999999 4381.280000000001 3282.3 2425.6899999999996 2486.6600000000003 2560.67 2361.7 2937.3999999999996 5729.1 6047.38 True False 4041.4505436841673 4702.327518480835 5002.611384813616 4086.463647348044 2068.874214292112 2749.7967106886845 3025.9105931506424 2696.478207402913 2272.083590063919 4434.892330967245 4545.648646802739 0.8890811538033834 1.03446787991155 1.100527509606861 0.8989836137516545 0.4551328919245201 0.604929444474949 0.6656719047740237 0.5931998746316498 0.499837045624287 0.9756346509725523 1.0 12.150270460875728 -6.5327429347502495 24.5994262585459 0.7068849231201214 1.0088507526359705 0.42194288290773907 0.16863465562147512 158.70788194965692 395786.9050892782 0.030009150948422502 0.06253027824462702 2.932628597327862e-07 6.5327429347502495 0.30196582951584905 SDYDRS(ph)RERDER ddPTM_A549_PD325901_60min_R1 11 SDYDRSRERDER 12 3 Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;A0A087X0F4;C9JUL9 Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog 1 SDYDRS(1)RERDER;S(0.02)DY(0.002)DRS(0.978)RERDER;SDYDRS(1)RERDER;SDYDRS(1)RERDER;SDYDRS(1)RERDER;S(0.001)DYDRS(0.999)RERDER;S(0.001)DY(0.003)DRS(0.996)RERDER;SDY(0.002)DRS(0.997)RERDER;SDY(0.002)DRS(0.997)RERDER;S(0.002)DY(0.022)DRS(0.975)RERDER;SDYDRS(1)RERDER 144.29 2.5323e-12 774998200.0 6908.950000000001 7152.3499999999985 7506.589999999999 7462.259999999999 9088.609999999999 9707.699999999999 7357.41 9083.6 9446.550000000001 8372.359999999999 9918.27 True False 7610.341517899831 7755.103635674508 8016.032338192668 7923.186852177914 8450.257387602358 9628.64370977767 7637.400263679233 8902.420472053656 9049.54435476252 7843.727760764101 8698.385667093735 0.8749142437647932 0.8915566557381225 0.921554026802648 0.9108801512620415 0.9714742149879542 1.10694605623238 0.8780250216510584 1.0234566289388376 1.0403705585275702 0.901745227328465 1.0 13.086531960774785 -6.853963985803989 3.4733323337005695 1.0143709776605667 0.8995183550867486 0.29001424568795553 0.06202314382795257 0.1428465691705515 3.3920843154617297 0.007257495977823482 0.014555853870780656 1.3997033892146426e-07 6.853963985803989 -0.11485262257381812 SEAAAPHTDAGGGLS(ph)S(ph)DEEEGTSSQAEAAR ddPTM_A549_MK2206_60min_R1 2 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR 30 0 Q01831-2;Q01831 Q01831-2 XPC DNA repair protein complementing XP-C cells 2 SEAAAPHTDAGGGLS(1)S(1)DEEEGTSSQAEAAR;SEAAAPHTDAGGGLS(0.999)S(0.999)DEEEGT(0.001)SSQAEAAR 125.83 6.167999999999999e-22 38099000.0 1983.32 2086.7 2194.2 2174.8 2989.1000000000004 2156.64 2099.26 2565.45 3862.3999999999996 2912.2 3642.6 True False 2318.055928481478 2192.9041169836714 2505.370553938126 2707.626097630483 2549.4073496368283 2384.8542133382284 2480.6683687384248 2929.11039386112 2987.572566985389 2254.331997389261 2738.0418893543415 0.8466108343682425 0.800902325676537 0.9150227261603064 0.9888914074535832 0.9311060431723361 0.8710072050433829 0.9060008827415683 1.0697829004186032 1.0911347187934695 0.8233372930320125 1.0 11.418928803245294 -8.239310368326475 9.278680809924035 1.046247276283554 0.8955141775481545 0.1752101879731932 0.08356555887642723 0.18904709644808854 75.72336479421679 0.009483313336002608 0.012140635712952279 5.76354424787147e-09 8.239310368326475 -0.15073309873539942 SEAAAPHTDAGGGLS(ph)S(ph)DEEEGTSSQAEAAR ddPTM_A549_PD325901_60min_R1 2 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR 30 0 Q01831-2;Q01831 Q01831-2 XPC DNA repair protein complementing XP-C cells 2 SEAAAPHTDAGGGLS(1)S(1)DEEEGTSSQAEAAR;SEAAAPHT(0.001)DAGGGLS(0.999)S(1)DEEEGTSSQAEAAR 143.85 3.2308e-36 106580000.0 4567.4 4446.7 5209.799999999999 4980.9 6938.8 5851.799999999999 4643.6 5068.2 5747.7 6892.8 5589.0 True False 5031.079085657833 4821.43901469501 5563.368357072403 5288.558880555352 6451.442625560482 5804.144880958104 4820.314739075418 4967.110775074013 5506.144157165163 6457.587431667395 4901.5884315900785 1.0264181001475368 0.9836482768772432 1.1350133604072594 1.0789479684730976 1.316194273672959 1.1841355025956832 0.9834189072279382 1.0133675734710104 1.123338736822293 1.3174479093448794 1.0 12.259033636139069 -11.11641471870164 0.6726028237353586 0.9754238074081221 1.0988712960706626 0.0 0.13357105064487015 2.447329233162032 1.3030555977782148 0.19280297180625747 0.019316584753108792 7.648658684504815e-12 11.11641471870164 0.12344748866254052 SEAAAPHTDAGGGLSS(ph)DEEEGTSSQAEAAR ddPTM_A549_MK2206_60min_R1 2 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR 30 0 Q01831-2;Q01831 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 SEAAAPHTDAGGGLS(0.046)S(0.953)DEEEGTSSQAEAAR;SEAAAPHTDAGGGLS(0.21)S(0.767)DEEEGT(0.008)S(0.008)S(0.008)QAEAAR 143.47 2.9516999999999996e-36 18292000.0 520.58 730.56 797.28 704.54 684.3299999999999 586.94 612.11 473.80999999999995 801.03 1117.47 1047.15 True False 608.4411770409655 767.7423835259452 910.3462926095114 877.1523316280029 583.6659635264693 649.0496012207605 723.3224637198234 540.9740184822685 619.5979839820596 865.032750883379 787.1137551302365 0.773002851335373 0.9753893621118511 1.1565625510621202 1.11439080553594 0.7415268247089589 0.8245944083563476 0.9189554356093572 0.6872882286153905 0.7871771773058907 1.0989933097284648 1.0 9.620428341521045 -6.755357098520418 24.999835612873962 0.8676369606226607 1.013570597686943 0.18213913345195587 0.14154258075063822 191.18849208858788 785828.7687542601 0.02000202727208947 0.040812303938667104 1.7564787558405326e-07 6.755357098520418 0.1459336370642822 SEAAAPHTDAGGGLSS(ph)DEEEGTSSQAEAAR ddPTM_A549_PD325901_60min_R1 2 SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR 30 0 Q01831-2;Q01831 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 SEAAAPHTDAGGGLS(0.188)S(0.812)DEEEGTSSQAEAAR;SEAAAPHTDAGGGLS(0.076)S(0.924)DEEEGTSSQAEAAR 156.9 2.3813e-46 32884000.0 1409.98 1567.81 1550.16 1239.0900000000001 1506.17 1775.33 1400.76 1351.8 1722.01 1390.12 1528.92 True False 1553.1201316275838 1699.9348509296724 1655.36317946934 1315.6257751224339 1400.3818152044207 1760.8723010887845 1454.0666883252825 1324.8372885334156 1649.6399081510822 1302.3475859606363 1340.8725326224185 1.158290660626824 1.2677825890019656 1.2345417921507085 0.9811713963216114 1.0443810139548586 1.3132287061208938 1.0844182820879207 0.9880411868400035 1.2302734734410514 0.9712687479797675 1.0 10.388956381491264 -11.031549252127366 1.2852500609890498 0.9988906372654734 1.1517301557234167 0.24105284611963085 0.10699307580290902 0.6007878051182857 1.746830504988854 0.0809877296930947 0.017636705623637176 9.299310478841162e-12 11.031549252127366 0.1528395184579433 SEAAEPPKT(ph)PPSSCDSTNAAIAK ddPTM_A549_MK2206_60min_R1 1 SEAAEPPKTPPSSCDSTNAAIAK 23 1 C9JKQ0;A0A0C4DFR3;Q9NQR1-2;Q9NQR1 C9JKQ0 SETD8 N-lysine methyltransferase SETD8 1 SEAAEPPKT(0.679)PPS(0.135)S(0.185)CDSTNAAIAK 114.2 1.6297e-15 8605600.0 2152.0 2735.5 2641.6 2573.6 2856.3 2858.7 2326.8 2518.6 3424.6 4379.4 3756.0 True False 2515.204988651422 2874.7252657348117 3016.2186014415092 3204.132115533293 2436.142053717731 3161.2057365485184 2749.5494414129585 2875.6192628890126 2648.933567962449 3390.090498374607 2823.2815396735577 0.8908799754140859 1.018221252587938 1.0683378752904182 1.1348964212417056 0.8628760608831842 1.1196919939178411 0.9738842558829168 1.0185379043782883 0.9382463387865783 1.2007624640816326 1.0 11.46315728721452 -8.733432465501714 24.329154158577847 0.9708385441348616 1.014662853553663 0.0 0.10582914940438286 357.805328797581 310819.2717546944 0.01287907426577895 0.014601721546500458 1.8474280548951075e-09 8.733432465501714 0.043824309418801444 SEAAGS(ph)PDQGSTYS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 SEAAGSPDQGSTYSPAR 17 0 Q96S66-4;Q96S66-3;Q96S66-2;Q96S66 Q96S66-4 CLCC1 Chloride channel CLIC-like protein 1 2 SEAAGS(0.99)PDQGS(0.16)T(0.138)Y(0.01)S(0.702)PAR 75.46300000000001 0.00054919 999500.0 190.31 315.46 160.74 195.14 200.06 360.16 307.37 252.48 528.97 162.57 319.69 True False 222.42967536721767 331.51556656139786 183.5353490292656 242.9493087601675 170.63143901787944 398.2718921451408 363.21515033827586 288.26981318757134 409.15913959151356 125.84532409023144 240.30215000485632 0.9256249907157408 1.3795780293879942 0.7637690675075379 1.0110159595128787 0.7100703802043848 1.6573796453219083 1.511493552308773 1.199613957601901 1.7026861373618372 0.5236962053301987 1.0 7.90870574622198 -7.258761589263302 24.99322359706642 1.363852486968321 0.9735854715073741 0.12711125155236713 0.3529079566259027 248.30076149921425 2317518.093672398 0.04534625430156913 0.07630473052611057 5.511101513642124e-08 7.258761589263302 -0.390267015460947 SEAAGS(ph)PDQGSTYS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 SEAAGSPDQGSTYSPAR 17 0 Q96S66-4;Q96S66-3;Q96S66-2;Q96S66 Q96S66-4 CLCC1 Chloride channel CLIC-like protein 1 2 SEAAGS(0.587)PDQGS(0.246)T(0.241)Y(0.177)S(0.748)PAR 83.10600000000001 0.00018491 1576800.0 404.13 458.18 396.47 508.06 307.03 619.34 512.8 328.22 309.1 580.11 475.2 True False 445.15698009521793 496.79243658285014 423.37683836778706 539.441712312022 285.4652719959985 614.2963003815227 532.3148846149269 321.67339461639114 296.10960192420475 543.481755597808 416.75341254099186 1.068154373064509 1.1920536740271699 1.0158929132371382 1.2943906302362012 0.6849740479759602 1.4740042478262863 1.2772898039858724 0.7718554544163483 0.7105151224048571 1.3040847159094378 1.0 8.703050202389678 -8.268136324246637 24.952088584665123 0.8526209623421532 1.1415997922641699 0.09084081677459588 0.24059697160010457 479.88232777647085 1787987.0664166196 0.03342177156109014 0.040874761127995284 5.393412976904113e-09 8.268136324246637 0.2889788299220166 SEAAGSPDQGSTYS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 SEAAGSPDQGSTYSPAR 17 0 Q96S66-4;Q96S66-3;Q96S66-2;Q96S66 Q96S66-4 CLCC1 Chloride channel CLIC-like protein 1 1 SEAAGSPDQGSTYS(1)PAR;SEAAGSPDQGSTYS(1)PAR 326.02 5.447499999999998e-173 35265000.0 6883.3 8182.4 7016.7 6954.3 9647.099999999999 8377.3 7068.799999999999 7091.1 11354.9 11118.8 11378.3 True False 8045.032759472277 8598.849210143853 8011.773569327163 8658.103812190393 8228.024369436092 9263.78032559831 8353.109459970732 8096.285140582972 8783.033280049298 8607.055357658031 8552.754084895541 0.9406365107211585 1.0053895066771201 0.9367477995744355 1.0123176378332803 0.9620321463430204 1.083134185040871 0.976657270518582 0.9466290109850453 1.026924566387386 1.0063489809508714 1.0 13.062173343821732 -6.56232320725284 1.8215835780420502 1.0082561334414046 0.9662278369860614 0.14139876732234824 0.03876196270081188 0.46139336051535385 3.039517269511573 0.005473475282774113 0.014842770325173244 2.739534618000117e-07 6.56232320725284 -0.04202829645534323 SEAAGSPDQGSTYS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 SEAAGSPDQGSTYSPAR 17 0 Q96S66-4;Q96S66-3;Q96S66-2;Q96S66 Q96S66-4 CLCC1 Chloride channel CLIC-like protein 1 1 SEAAGSPDQGSTYS(1)PAR;SEAAGSPDQGSTYS(1)PAR 207.53 9.919899999999998e-50 54758000.0 3228.1000000000004 3074.8 2973.8999999999996 2634.0 3770.4 2884.3999999999996 3672.2000000000003 3172.3 3497.7 3408.0 4025.5 True False 3555.8143355983807 3333.92418701154 3175.726737513463 2796.6961977519704 3505.580111173868 2860.9104027197727 3811.947580504946 3109.0259878787947 3350.703832579393 3192.8182983870797 3530.3890197469764 1.007201845379982 0.9443503728239228 0.8995401695819538 0.7921779107369902 0.9929727550039552 0.8103668991483592 1.0797528428688998 0.8806468552017022 0.9491032897047528 0.9043814380025207 1.0 11.785611450010327 -7.756850028283975 24.993553225302826 0.9737660236652755 0.9076759782568511 0.10189439090894725 0.0782862518327632 163.33095354080825 889492.2193530077 0.010979814869986436 0.015985743130684363 1.750451054643353e-08 7.756850028283975 -0.06609004540842445 SEAAPASLEGGSLKS(ph)PPPFFYR ddPTM_A549_MK2206_60min_R1 2 SEAAPASLEGGSLKSPPPFFYR 22 1 Q8WYL5;Q8WYL5-4 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 SEAAPAS(0.001)LEGGS(0.034)LKS(0.964)PPPFFYR;SEAAPAS(0.02)LEGGS(0.121)LKS(0.825)PPPFFY(0.034)R 69.152 0.00017823 21820800.0 4586.2 5463.9 5078.8 3997.6000000000004 6325.900000000001 4827.7 4749.799999999999 5881.299999999999 6875.2 6066.5 6161.4 True False 5360.238438175259 5741.989171796176 5799.050209343251 4977.012179459083 5395.368489869058 5338.564009632099 5612.777177592941 6714.992285725856 5317.978177438368 4696.073436632771 4631.3543340108245 1.1573803366353983 1.2398077878924727 1.2521283821359406 1.074634290645802 1.164965602015725 1.1527004035143258 1.211908390678497 1.4498981942309237 1.1482555196403892 1.0139741203014148 1.0 12.177218423125533 -9.854214886452827 1.1260949986458364 1.0244796966503644 1.2059896587900827 0.4065282506275859 0.09145031425278109 0.32082238696793475 0.8263405255522234 0.0293448072515058 0.018120028662837254 1.398894985979164e-10 9.854214886452827 0.18150996213971826 SEAAPASLEGGSLKS(ph)PPPFFYR ddPTM_A549_PD325901_60min_R1 4 SEAAPASLEGGSLKSPPPFFYR 22 1 Q8WYL5;Q8WYL5-4 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 SEAAPAS(0.011)LEGGS(0.182)LKS(0.798)PPPFFY(0.009)R;SEAAPASLEGGS(0.148)LKS(0.852)PPPFFYR;SEAAPASLEGGS(0.015)LKS(0.985)PPPFFYR;SEAAPAS(0.003)LEGGS(0.125)LKS(0.863)PPPFFY(0.009)R 109.68 7.5407e-11 18909900.0 8397.9 8894.7 10256.5 9954.1 11385.900000000001 10694.7 10927.8 11834.400000000001 12128.099999999999 14014.1 15555.2 True False 9250.44862579277 9644.287584952368 10952.567767344846 10568.94214959866 10586.193663222612 10607.60590901648 11343.66340892161 11598.353608092804 11618.39813360384 13129.247334338736 13642.009012537123 0.6780855090545336 0.7069550808894193 0.8028559251998253 0.774735021790831 0.7759996092579773 0.7775691908184491 0.8315244036634697 0.8501939558487184 0.8516632794280103 0.9624130377184801 1.0 13.735768500377494 -14.99999999857338 0.0536746360001975 1.9225815219500744 0.3564791890261603 0.9253108630803287 0.025226117531071214 51.720155255763096 0.211146785257446 6.579784064175054 1.392657672380513 1.0000000032849153e-15 14.99999999857338 -1.566102332923914 SEAEEGEVRT(ph)PTK ddPTM_A549_MK2206_60min_R1 6 SEAEEGEVRTPTK 13 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 SEAEEGEVRT(0.992)PT(0.008)K;SEAEEGEVRT(1)PTK;SEAEEGEVRT(1)PTK;SEAEEGEVRT(0.988)PT(0.012)K;SEAEEGEVRT(0.995)PT(0.005)K;SEAEEGEVRT(0.994)PT(0.006)K 165.02 1.9672000000000002e-19 1466007900.0 21025.789999999997 24077.9 20920.19 19326.82 25908.47 19439.460000000003 17576.11 20163.57 26200.34 24816.87 26901.530000000002 True False 24574.429320788655 25303.362264973945 23886.98751653944 24061.891767613928 22097.36838374268 21496.530754330794 20769.461678147112 23021.81779584332 20266.004823345585 19210.721830935254 20221.137656542705 1.2152842109176487 1.2513322788634915 1.1812880126856078 1.1899375878996856 1.0927856166684522 1.0630722721664192 1.027116378460882 1.1385025999461722 1.0022188250515354 0.9500317023320137 1.0 14.303576546191039 -6.699807465028242 0.43614847218254943 0.9972048555099088 1.2893814144161766 0.817479744075261 0.040965337181117 0.4898835784854611 0.1319230040072385 0.009989773265153054 0.06091203375098142 1.99614706703467e-07 6.699807465028242 0.2921765589062678 SEAEEGEVRT(ph)PTK ddPTM_A549_PD325901_60min_R1 4 SEAEEGEVRTPTK 13 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 SEAEEGEVRT(0.999)PT(0.001)K;SEAEEGEVRT(0.998)PT(0.002)K;SEAEEGEVRT(0.998)PT(0.002)K;SEAEEGEVRT(1)PTK 167.55 5.680600000000001e-21 1608333000.0 25288.6 25780.600000000002 26738.199999999997 27707.3 30489.899999999998 27917.199999999997 26536.800000000003 30098.5 30000.899999999998 34991.3 35978.2 True False 27855.880055516634 27953.22163902358 28552.8150418583 29418.71699315611 28348.394608444778 27689.851579118156 27546.67244549414 29498.161805683525 28740.06650394004 32781.94334634738 31553.10948460083 0.8828251956946243 0.8859102033245205 0.9049128757276111 0.9323555577783423 0.8984342612026849 0.8775633220121111 0.87302560335418 0.9348733702483363 0.9108473609539602 1.0389449370226498 1.0 14.945494565960502 -10.558568028283732 0.4677356546292192 1.0198241346994041 0.8949739460656556 0.8085656666682831 0.022158994591789237 0.5286765893311608 0.1654984148156222 0.03030355836531448 0.005181552365999145 2.7633250355138255e-11 10.558568028283732 -0.12485018863374853 SEAEEGEVRT(ph)PTKIK ddPTM_A549_MK2206_60min_R1 2 SEAEEGEVRTPTKIK 15 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 SEAEEGEVRT(0.997)PT(0.003)KIK;SEAEEGEVRT(0.888)PT(0.112)KIK 132.13 7.713200000000001e-10 83111000.0 8569.6 12306.7 12174.7 9834.6 13274.599999999999 7972.7 8425.9 7076.200000000001 15084.6 12386.1 14857.599999999999 True False 10015.938973395554 12933.05846383426 13901.255529591892 12244.077441491967 11321.923924756282 8816.365822150061 9956.776963383798 8079.273019953633 11667.962185156333 9588.07140747995 11168.047871100602 0.8968388288622631 1.1580411019996566 1.2447345937300263 1.0963489396545112 1.0137782408735785 0.7894276532395643 0.8915413936529416 0.7234275061499559 1.0447629093128579 0.8585270692016701 1.0 13.447089410240045 -6.81860832044625 4.185856337051215 0.969376360974224 1.114624389055664 0.2677171608218306 0.12961006960123506 0.27744150098229714 9.88062479930329 0.019839530668967743 0.03942276168893297 1.518419175174878e-07 6.81860832044625 0.14524802808144 SEAEEGEVRT(ph)PTKIK ddPTM_A549_PD325901_60min_R1 2 SEAEEGEVRTPTKIK 15 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 SEAEEGEVRT(0.983)PT(0.017)KIK;SEAEEGEVRT(0.996)PT(0.004)KIK 148.06 3.1103e-14 173126000.0 5384.9 6214.6 7416.0 7750.200000000001 7321.200000000001 11585.900000000001 8902.6 9731.9 9569.6 11039.9 9316.3 True False 5931.571083846139 6738.326152140599 7919.294356030744 8228.912252018721 6806.984168768865 11491.548271692907 9241.393314689642 9537.789619972144 9167.422991180427 10342.83882991888 8170.454160891506 0.725978136226264 0.8247186777442684 0.9692599946202554 1.0071548153843184 0.8331218846255827 1.4064760716360258 1.13107461748262 1.1673512184457862 1.1220212255838833 1.2658829761784425 1.0 12.996200558560007 -5.7251583115269975 0.8887448453037446 1.0867867846320545 0.6556784772501185 0.4879394967081895 0.13848657228379221 0.8670070508561697 0.7710156086123402 0.02046577489222429 0.3083758138578002 1.8829625760034275e-06 5.7251583115269975 -0.43110830738193595 SEAGAGPGPK ddPTM_A549_PD325901_60min_R1 1 SEAGAGPGPK 10 0 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 0 138.1 9.3709e-07 3398500.0 1763.9 1880.2 1271.8 1955.4 2373.4 1858.2 1588.8 1818.5 1886.8 1717.9 2290.9 False True 1942.969829485451 2038.6510525624728 1358.1119959546788 2076.180616964391 2206.7005717855036 1843.0674352842464 1649.26265342472 1782.2285909143486 1807.5043575237435 1609.431500821353 2009.1338232116134 0.9670683988484158 1.0146915198031339 0.6759689077274743 1.0333709944943352 1.0983342902754374 0.9173442873696144 0.8208824292193553 0.8870631564329771 0.8996435860277521 0.8010573921097333 1.0 10.972357946121939 -10.833708952684887 1.1354068091413068 0.9990602228819593 0.9219196326731931 0.0 0.1222981115692448 1.187345556783825 2.768607182690636 0.06998100137919984 0.018099472966204417 1.4665303234431066e-11 10.833708952684887 -0.07714059020876618 SEANDAVNS(ph)STK ddPTM_A549_MK2206_60min_R1 2 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.996)S(0.004)TK;SEANDAVNS(0.981)S(0.014)T(0.005)K 160.79 5.3711e-14 19248900.0 7593.4 6318.200000000001 5805.2 5743.700000000001 9490.400000000001 7771.2 6198.5 8019.1 9861.0 9922.3 9430.0 True False 8874.980279194106 6639.769392785848 6628.464652138191 7150.906757844494 8094.374731856858 8593.543225894931 7324.687215316404 9155.83198246378 7627.499244781208 7680.845538663364 7088.27074524006 1.2520656445232234 0.9367262667336189 0.9351314150336822 1.0088365716908452 1.141939271618881 1.2123610306033665 1.0333531941108631 1.2916876783540099 1.0760733497522301 1.0835993452734902 1.0 12.791217995123205 -5.234493531961179 23.359037802393395 1.0573864994773807 1.2520662964378622 0.18215808043374138 0.10567219565965967 4403.119908296418 3816868.2154506748 0.014862740801859608 1.4925685102090027 5.827824542330776e-06 5.234493531961179 0.19467979696048143 SEANDAVNS(ph)STK ddPTM_A549_PD325901_60min_R1 1 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.731)S(0.242)T(0.027)K 142.55 1.0115e-11 14521000.0 5017.9 5067.6 5570.9 4493.7 6157.0 5519.1 5117.8 5369.9 5169.0 5947.3 5326.7 True False 5527.313514017257 5494.664436743749 5948.974774543103 4771.265643066827 5724.553560496899 5474.154279451775 5312.5606795676185 5262.793131894946 4951.764905681701 5571.786463027433 4671.549668733379 1.1831862884839894 1.1761973705469657 1.2734478270368212 1.021345373891847 1.225407833895305 1.1718069308114647 1.1372159253972012 1.1265625980857599 1.0599833581613824 1.1927062448504673 1.0 12.189685491671376 -8.774592823392648 0.6331694379070795 1.0084369656286134 1.1823202351877 0.02825016799749247 0.07990081064309676 0.3137247563433383 0.27325935911304317 0.01664762334840739 0.016441227501806075 1.6803787336590763e-09 8.774592823392648 0.17388326955908662 SEANDAVNS(ph)STKEEK ddPTM_A549_MK2206_60min_R1 2 SEANDAVNSSTKEEK 15 1 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.94)S(0.045)T(0.015)KEEK;SEANDAVNS(0.95)S(0.041)T(0.009)KEEK 130.05 7.7641e-10 60377000.0 13883.1 14017.6 13029.599999999999 12664.7 17187.6 14619.5 13369.8 15505.800000000001 19079.0 18536.7 17794.7 True False 16226.22787079302 14731.035965989517 14877.393204626844 15767.552068539982 14659.326808276037 16166.525786361306 15798.919598505647 17703.79463452093 14757.636962902408 14349.246595702729 13375.784881264397 1.2131047272987523 1.1013212380997122 1.1122631932774103 1.178813221691817 1.0959601203522278 1.2086412819785948 1.1811583199603755 1.3235705262663744 1.1033099809771603 1.0727779134517832 1.0 13.707335929835915 -9.526748227806905 1.382912176919661 1.025259096471835 1.1694884134018004 0.38042094999154574 0.06559436120771912 0.23355651059469618 0.9140127559881278 0.016300624937043356 0.012671076976985546 2.973389285930571e-10 9.526748227806905 0.14422931692996532 SEANDAVNS(ph)STKEEK ddPTM_A549_PD325901_60min_R1 1 SEANDAVNSSTKEEK 15 1 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.982)S(0.015)T(0.002)KEEK 164.98 1.1502000000000001e-20 31700000.0 10589.0 10921.0 11601.0 11084.0 13619.0 10868.0 11704.0 11749.0 13060.0 11994.0 13231.0 True False 11663.9874847902 11841.350997252826 12388.313622480136 11768.633506409577 12662.44842299939 10779.49461127391 12149.402124674549 11514.656978087807 12511.133617373385 11236.696793091152 11603.670878219418 1.0051980625100285 1.0204831834277155 1.0676202171274545 1.0142164173666628 1.0912450513196943 0.9289727987293641 1.0470309139394407 0.9923288155045233 1.0782047981779037 0.9683743111141585 1.0 13.50229366076552 SEANDAVNS(ph)STKEEKGEEKPDTK ddPTM_A549_MK2206_60min_R1 2 SEANDAVNSSTKEEKGEEKPDTK 23 3 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.966)S(0.032)T(0.001)KEEKGEEKPDTK;SEANDAVNS(0.976)S(0.021)T(0.003)KEEKGEEKPDTK 148.89 3.8786999999999996e-28 360750000.0 13906.0 13500.0 13118.4 13452.400000000001 16068.7 12346.0 11772.8 11609.4 18111.0 19728.6 18442.9 True False 16252.992830941774 14187.092336837854 14978.786379902427 16748.23860390119 13705.015516078169 13652.445525388472 13911.765370408477 13255.068002296386 14008.887417324042 15271.895557892236 13863.018931854485 1.1723992379174784 1.0233768277008344 1.0804851709092114 1.2081234748527276 0.9886025247059819 0.9848104220659933 1.0035162931532886 0.956145848711124 1.0105221298612224 1.101628413909212 1.0 13.758953845087065 -6.797017966530535 24.99987809198717 0.9987133582853769 1.1112155159709627 0.48500693520003724 0.05613118130555861 88.71736275805212 62338.489272766725 0.006364161233876929 0.01202745566000718 1.595813127935197e-07 6.797017966530535 0.1125021576855858 SEANDAVNS(ph)STKEEKGEEKPDTK ddPTM_A549_PD325901_60min_R1 2 SEANDAVNSSTKEEKGEEKPDTK 23 3 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.925)S(0.038)T(0.038)KEEKGEEKPDTK;SEANDAVNS(0.891)S(0.082)T(0.027)KEEKGEEKPDTK 122.66 4.1848e-16 332668000.0 7336.3 7445.8 7930.9 7862.6 10149.1 9116.1 8721.7 9198.0 9523.5 9483.5 8860.4 True False 8081.075775301386 8073.2836970373755 8469.13856637598 8348.2549447398 9436.26222849424 9041.861504033324 9053.609066197367 9014.53867430859 9123.260413863354 8884.710191535769 7770.626970703296 1.039951577365448 1.0389488168039918 1.0898912788255313 1.074334796434608 1.2143501758700679 1.1635948473814042 1.165106638155602 1.1600786794032285 1.1740700522956173 1.1433710851174266 1.0 12.923815291407386 -5.917886937561362 2.080157001954046 1.110107574817468 1.0364983972570496 0.2118313106527846 0.05864164294725413 0.6296450235653823 5.224294496418922 0.011556047966420322 0.05314884822568888 1.208128313324613e-06 5.917886937561362 -0.0736091775604184 SEANDAVNSS(ph)TK ddPTM_A549_PD325901_60min_R1 1 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.281)S(0.624)T(0.096)K 120.77 1.435e-05 12274000.0 5033.0 5207.7 5698.3 6589.5 6079.1 6378.7 5986.2 5770.6 6578.5 7189.9 6799.0 True False 5543.94645490123 5646.571155424739 6085.020904661539 6996.518449159686 5652.124987756486 6326.753982051246 6214.00811677433 5655.500856051876 6302.028522349983 6735.928486963992 5962.766102412044 0.9297608458360636 0.9469717675393307 1.0205030350259825 1.1733679183440502 0.9479031863198695 1.061043460935347 1.0421351450060492 0.9484693444145204 1.0568968183743952 1.1296650533112795 1.0 12.541766030864308 -5.752647300065308 4.902556868196781 1.0298005149640648 0.9357356733273272 0.25997573814705544 0.06518116400229816 0.16526692228039622 10.505516604360363 0.0075472298830342 0.02848409479792489 1.7674726407131303e-06 5.752647300065308 -0.09406484163673756 SEAPAEVTHFS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SEAPAEVTHFSPK 13 0 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 SEAPAEVT(0.008)HFS(0.992)PK;SEAPAEVT(0.033)HFS(0.967)PK 122.68 2.1584999999999997e-06 270890000.0 8852.6 9817.0 9012.6 8425.2 13293.800000000001 11031.0 8900.2 9428.4 15331.7 12636.1 13073.5 True False 10346.702454709848 10316.643368202755 10290.722201450537 10489.374378221608 11338.299630190371 12198.293098214814 10517.251133945161 10764.904573264013 11859.094429693945 9781.596233847416 9826.989139755658 1.0528863223071714 1.0498274925802218 1.0471897399193024 1.0674046983308683 1.1537918144552148 1.241305238535973 1.070241452836964 1.095442807575106 1.2067881892447898 0.9953807920958615 1.0 13.262533746140477 -6.570791530039486 9.044111172932983 1.1117582994064172 1.0511518738792511 0.12265346274385103 0.07111100774981594 0.5861994495370934 103.85112101875089 0.012100560002367226 0.025250515273669654 2.6866337736518665e-07 6.570791530039486 -0.06060642552716611 SEAPAEVTHFS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SEAPAEVTHFSPK 13 0 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 SEAPAEVT(0.292)HFS(0.708)PK;SEAPAEVT(0.017)HFS(0.983)PK 121.19 2.8815e-06 535730000.0 15932.4 16092.8 15374.1 15514.9 19050.0 15796.0 17377.3 18187.9 18129.8 17960.1 18107.8 True False 17549.845519187034 17448.996733686516 16417.4788779736 16473.220136105563 17711.993718932263 15667.3626131471 18038.602660723427 17825.12806636847 17367.867554077788 16826.09622091015 15880.655394801706 1.1051083902325411 1.0987579731374426 1.0338036101046317 1.0373136200347137 1.11531881264359 0.9865690189509165 1.135885277545163 1.1224428478060962 1.0936492935778266 1.059534118876348 1.0 13.954982833297251 -10.721903789918379 1.0159875724957228 1.0007457274607088 1.080093112415536 0.11221704345598305 0.04588038525978625 0.4947674305973262 0.9207917154002669 0.027484118460494287 0.007399702522256585 1.8971261486222833e-11 10.721903789918379 0.07934738495482718 SEAPET(ph)PMEEEAELVLTEK ddPTM_A549_MK2206_60min_R1 1 SEAPETPMEEEAELVLTEK 19 0 Q5JTH9-2;Q5JTH9-3;Q5JTH9;A0A087X1U8 Q5JTH9-2 RRP12 RRP12-like protein 1 S(0.176)EAPET(0.823)PMEEEAELVLT(0.001)EK 44.586999999999996 0.011977 291380000.0 1601.8 1616.3 1541.6 1914.7 2204.0 1467.2 1504.0 1647.0 2760.2 2029.6 2159.9 True False 1872.1446797499302 1698.5627662245215 1760.22206086547 2383.8015859541492 1879.794519621146 1622.4581301514627 1777.2573319086678 1880.4672937259597 2135.019107133666 1571.111950381582 1623.5372197925774 1.1531270468743025 1.0462111650520272 1.0841895334499048 1.4682765241801496 1.1578388821053995 0.9993353465335075 1.0946822223981596 1.1582532699596548 1.315041676350626 0.9677092284846458 1.0 10.664924743628353 -6.993635601221917 24.972867433018006 1.1367534365232295 1.1882454910921076 0.04789541396984143 0.13844335277332123 672.1293174063093 2637297.973276427 0.022631946830648172 0.042693953736288225 1.0147624744140647e-07 6.993635601221917 0.051492054568878176 SEAPS(ph)GESR ddPTM_A549_MK2206_60min_R1 2 SEAPSGESR 9 0 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 SEAPS(0.999)GES(0.001)R;SEAPS(0.999)GES(0.001)R 64.73 0.0061418 5437900.0 1730.56 1612.9699999999998 1270.17 1036.5300000000002 873.31 544.51 683.3299999999999 751.39 637.13 1614.3899999999999 1893.04 True False 2022.6362198701713 1695.063283448101 1450.299205403149 1290.4798965316006 744.8472558667619 602.129686783515 807.4822158332108 857.9018335353663 492.8210722875417 1249.69817775745 1422.9459227538964 1.4214427881810612 1.1912352088318034 1.0192229952044238 0.9069071957661414 0.5234543660135887 0.42315711170399517 0.5674721736933271 0.6029054371054574 0.34633858139440826 0.8782471334812557 1.0 10.47466511978212 -6.0367079588777175 1.3165183554466415 0.6407044208421049 1.3806002504471464 0.6730995524416521 0.1857887505355665 0.32758663625321943 0.9653515699945815 0.037812562998417405 0.21996493929929903 9.189503364870054e-07 6.0367079588777175 0.7398958296050415 SECDSS(ph)PEPK ddPTM_A549_MK2206_60min_R1 2 SECDSSPEPK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)ECDS(0.417)S(0.582)PEPK;SECDS(0.317)S(0.683)PEPK 101.38 0.00042654 66187000.0 2745.7 2562.9 2718.2 2418.9 2454.6 1702.16 1387.52 1724.58 2951.0 3159.4 3750.3 True False 3209.1070340800243 2693.3406629690185 3103.681633267076 3011.5306085885486 2093.5315915889573 1882.2814413976375 1639.6144236502096 1969.0444963047457 2282.6032117786567 2445.6893457014035 2818.9970069855544 1.138386109005354 0.9554251587691807 1.1009879136359724 1.0682986186668133 0.7426512289304057 0.6677131748395939 0.5816304237241823 0.6984911624330915 0.809721757817515 0.8675742966881185 1.0 11.460966230818244 -6.746661949171141 24.58264697722288 0.8383516249997081 1.060407699686106 0.5292931027273389 0.12444700384469772 194.37883514253446 323351.85946822976 0.023033742310513937 0.04778167685862379 1.7920001877549448e-07 6.746661949171141 0.222056074686398 SECDSS(ph)PEPK ddPTM_A549_PD325901_60min_R1 1 SECDSSPEPK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SECDS(0.377)S(0.623)PEPK 88.134 0.00071015 39729000.0 2404.8 2308.1 2790.7 1887.0 2352.5 2361.0 2762.9 2365.1 2481.2 2436.2 3096.0 True False 2648.9335256798076 2502.6116872776547 2980.093683842366 2003.555704312062 2187.268515684418 2341.7727987870558 2868.043671416893 2317.926225114944 2376.9237926054243 2282.377916235508 2715.211627161008 0.9755900789396295 0.9217004163665706 1.0975548476706825 0.7379003847324253 0.8055609713086708 0.8624641907693894 1.0562873415563871 0.8536816069613473 0.8754101407155164 0.8405893276989 1.0 11.406848932620685 -10.889290974309354 1.1219633008210728 1.0003664080561672 0.9061810987750679 0.0 0.10966232511431086 0.9578710413734631 2.1280653999799943 0.0705253331305993 0.016654586069311254 1.290354455343868e-11 10.889290974309354 -0.09418530928109925 SEDADRCTLPEHES(ph)PSQDISDACEAESTER ddPTM_A549_MK2206_60min_R1 2 SEDADRCTLPEHESPSQDISDACEAESTER 30 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 S(0.016)EDADRCT(0.104)LPEHES(0.577)PS(0.3)QDIS(0.003)DACEAESTER;S(0.002)EDADRCT(0.007)LPEHES(0.48)PS(0.48)QDIS(0.03)DACEAES(0.001)T(0.001)ER 60.527 0.00049179 3568300.0 630.0999999999999 574.75 521.17 446.77 785.8399999999999 675.81 331.38 714.87 1061.56 832.34 864.51 True False 736.4454755340437 604.0023200442635 595.0797427745574 556.2286700562672 670.2439769959534 747.3237656336281 391.5874565478021 816.2050116975574 821.1183549629787 644.3138159147642 649.8283077378028 1.1332923893355378 0.9294798531429481 0.915749184344035 0.8559625110709985 1.031417020488415 1.150032642060837 0.6026014131501987 1.2560317886719172 1.2635927754847658 0.9915139248977383 1.0 9.343914781308253 SEDADRCTLPEHES(ph)PSQDISDACEAESTER ddPTM_A549_PD325901_60min_R1 2 SEDADRCTLPEHESPSQDISDACEAESTER 30 1 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 S(0.015)EDADRCT(0.094)LPEHES(0.616)PS(0.262)QDIS(0.013)DACEAESTER;S(0.01)EDADRCT(0.036)LPEHES(0.649)PS(0.299)QDIS(0.005)DACEAES(0.001)T(0.001)ER 61.013999999999996 0.00047336 5239500.0 528.0799999999999 523.18 441.73 557.64 625.6600000000001 691.77 584.49 946.77 687.9300000000001 556.4 680.1800000000001 True False 581.6902928480511 567.2702147003694 471.7084541382768 592.0841563076721 581.7158000098244 686.1364544756126 606.7330867952002 927.885929623303 659.0186944410165 521.2688090441821 596.522172016271 0.975136080662203 0.9509624978112233 0.7907643274077837 0.992560183146926 0.9751788404504724 1.1502279155130837 1.0171174103125384 1.5554927765501287 1.104768146695209 0.8738464947283866 1.0 9.220431951942412 -6.950512266942331 2.172058455160878 1.096205118121728 0.9145782039528245 0.22030815999973075 0.16674255864643506 0.3906380783984723 3.711379650706673 0.024289795461689048 0.05025006334415188 1.1206957708770929e-07 6.950512266942331 -0.18162691416890353 SEDARS(ph)SPS(ph)QR ddPTM_A549_PD325901_60min_R1 1 SEDARSSPSQR 11 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 2 S(0.223)EDARS(0.747)S(0.277)PS(0.753)QR 44.925 0.026877999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SEDARS(ph)SPSQR ddPTM_A549_MK2206_60min_R1 4 SEDARSSPSQR 11 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.142)EDARS(0.498)S(0.353)PS(0.006)QR;S(0.001)EDARS(0.784)S(0.212)PS(0.003)QR;S(0.001)EDARS(0.594)S(0.391)PS(0.014)QR;S(0.002)EDARS(0.83)S(0.163)PS(0.006)QR 77.192 0.00032439999999999997 104441000.0 1879.87 1992.5 1161.95 1448.3400000000001 1532.3200000000002 820.09 815.02 626.83 1596.3600000000001 3044.0299999999997 3088.83 True False 2197.146097591148 2093.9097393444017 1326.7319821112048 1803.1833650184526 1306.9177578520305 906.8713794683154 963.0985842102406 715.6850720863652 1234.7870088630903 2356.3815088293477 2321.7882636288273 0.9463163079983572 0.9018521508381372 0.5714267760306427 0.776635575804047 0.5628927401887156 0.39059176655967986 0.41480896397717615 0.30824734679629606 0.5318258465710332 1.0148993970477105 1.0 11.181020695736791 -5.683752208603932 6.780813769407963 0.6684692504803307 0.9314011044589262 0.19106189886582525 0.2241887502731588 0.34854698478726226 24.558570977165072 0.03642371944297426 0.14326492441693506 2.0713228272634542e-06 5.683752208603932 0.26293185397859553 SEDARS(ph)SPSQR ddPTM_A549_PD325901_60min_R1 2 SEDARSSPSQR 11 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.001)EDARS(0.677)S(0.316)PS(0.006)QR;SEDARS(0.674)S(0.325)PS(0.001)QR 118.24 4.4583e-06 58822000.0 2113.7400000000002 2045.6299999999999 1813.55 2827.3199999999997 2116.84 4907.709999999999 3191.21 3554.2799999999997 3016.66 2886.14 3290.4900000000002 True False 2328.3253287468547 2218.0224192391097 1936.6284087620766 3001.957135090394 1968.160461101552 4867.743236906066 3312.653242847116 3483.3870971212787 2889.880270917734 2703.908627848266 2885.7805901346987 0.8068268726688526 0.7686039703855586 0.6710934349557328 1.0402582737415502 0.6820201327259203 1.6868029584601427 1.1479227679927295 1.2070866056239866 1.0014206488175332 0.9369765106508171 1.0 11.494745898573724 -6.273866175459766 22.326076359633472 1.054315684178465 0.7508177051112538 0.2870690383206802 0.23360201043660603 182.53061880137784 327937.5010631774 0.03214111463841024 0.07533609928615868 5.322722496431949e-07 6.273866175459766 -0.3034979790672113 SEDARSS(ph)PSQR ddPTM_A549_PD325901_60min_R1 3 SEDARSSPSQR 11 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 SEDARS(0.262)S(0.737)PS(0.001)QR;SEDARS(0.17)S(0.792)PS(0.038)QR;S(0.004)EDARS(0.433)S(0.559)PS(0.004)QR 85.45 0.00011945 74743000.0 592.29 657.58 646.36 936.6600000000001 772.43 1596.08 982.9100000000001 1093.81 879.61 924.4000000000001 963.92 True False 652.418844779147 712.9965743772108 690.225876478429 994.5153608907978 718.1771815388371 1583.0820536586366 1020.3151779189899 1071.993101472655 842.6430506261722 866.0332262409088 845.3639507923251 0.77176090152373 0.8434196581353489 0.8164836882759295 1.1764345521933826 0.8495479146771269 1.8726633093058658 1.206953735089709 1.2680847112866829 0.9967813860957725 1.0244501500557377 1.0 9.723428782008554 -6.249435684011714 22.712476646604387 1.0939351279850555 0.8138411104878108 0.24213215376038233 0.2596840022477305 307.04908915382396 580968.0789863584 0.037571933949803585 0.0983482234812711 5.630724983357152e-07 6.249435684011714 -0.2800940174972447 SEDDES(ph)GAGELTREELR ddPTM_A549_PD325901_60min_R1 3 SEDDESGAGELTREELR 17 1 P33993;P33993-3;P33993-2 P33993 MCM7 DNA replication licensing factor MCM7 1 SEDDES(0.521)GAGELT(0.479)REELR;S(0.01)EDDES(0.989)GAGELT(0.001)REELR;S(0.018)EDDES(0.967)GAGELT(0.015)REELR 56.528999999999996 0.0025843000000000003 3790300.0 782.67 490.47 418.15999999999997 577.11 745.71 757.49 702.65 762.4300000000001 789.24 547.052 692.9300000000001 True False 862.1260822287991 531.8036282046147 446.53885220035284 612.7567739880942 693.3339021598413 751.321252585009 729.3897302548337 747.2227355352359 756.0709874560313 512.5110433595216 607.7040028451801 1.4186611873419503 0.8751030529909116 0.734796628144169 1.00831452667624 1.140907249111006 1.2363276349463461 1.2002384826164367 1.229583369595806 1.2441435039364872 0.8433563724445139 1.0 9.247224984481248 -6.724805246537626 5.197712417479649 1.1440537225596903 0.9776506397150659 0.07030807081126178 0.1917558359470898 0.28168061261874494 18.35762431294523 0.025544656460011667 0.05300468978342201 1.884493975767386e-07 6.724805246537626 -0.16640308284462435 SEDDESGAGELTR ddPTM_A549_MK2206_60min_R1 1 SEDDESGAGELTR 13 0 P33993;P33993-3;P33993-2 P33993 MCM7 DNA replication licensing factor MCM7 0 53.683 0.05943300000000001 256290.0 0.0 0.0 149.76 0.0 218.73 200.74 95.447 107.09 294.67 0.0 216.62 False True 0.0 0.0 170.99821992424293 0.0 186.5551067498789 221.98217355957235 112.78848441402033 122.27033544937036 227.9277154912968 0.0 162.82727559214223 0.0 0.0 1.050181668288596 0.0 1.1457239339751117 1.3632984569219484 0.6926879050444747 0.7509204769576758 1.3998128671158347 0.0 1.0 7.3471985789704055 -6.329583136761262 0.7256836152249738 1.1502429905167142 1.6090211777039139e-12 0.14561272760084532 0.5059396931692444 0.6368006628557964 0.48842995370607567 0.0631439298997834 0.44640089252047366 4.681843185200612e-07 6.329583136761262 -1.1502429905151053 SEDDSAKFDS(ph)NEEDSASVFSPSFGLK ddPTM_A549_MK2206_60min_R1 4 SEDDSAKFDSNEEDSASVFSPSFGLK 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 SEDDSAKFDS(1)NEEDSASVFSPSFGLK;S(0.001)EDDS(0.169)AKFDS(0.673)NEEDS(0.152)AS(0.006)VFSPSFGLK;S(0.004)EDDS(0.248)AKFDS(0.737)NEEDS(0.01)AS(0.001)VFSPSFGLK;SEDDSAKFDS(0.999)NEEDSASVFSPSFGLK 225.78 1.0116999999999998e-95 43157300.0 5988.3 6880.2 6962.6 6271.94 8724.0 6869.3 5662.3 6578.2 10988.7 10055.599999999999 10140.699999999999 True False 6998.978640121435 7230.372792289762 7950.001375831561 7808.565581558083 7440.711156612918 7596.204766527702 6691.066616001629 7510.679994892594 8499.776995348066 7784.0329760825 7622.484320917908 0.9182017758848745 0.9485585654073307 1.0429672323516452 1.0244121539390412 0.976153028769615 0.9965523636017082 0.8778065436802215 0.9853322983271351 1.1150927489640954 1.0211937012085763 1.0 12.896045562346144 -8.598831147736893 9.484366345134045 1.0542581866755751 0.9716566599315558 0.2959199697019985 0.05085364251843081 0.3116157102745343 36.26740361451373 0.010069101813486185 0.011417170453338031 2.51865598256428e-09 8.598831147736893 -0.08260152674401933 SEDDSAKFDS(ph)NEEDSASVFSPSFGLK ddPTM_A549_PD325901_60min_R1 4 SEDDSAKFDSNEEDSASVFSPSFGLK 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDS(0.005)AKFDS(0.993)NEEDS(0.001)ASVFSPSFGLK;SEDDSAKFDS(0.962)NEEDS(0.038)ASVFSPSFGLK 279.24 1.2139999999999997e-153 63786000.0 15671.6 17471.8 16418.1 17467.100000000002 18665.9 18842.1 19306.300000000003 19715.5 20801.0 20140.9 20947.800000000003 True False 17262.569295177844 18944.209903287436 17532.330996055603 18546.003096337674 17354.871577859198 18688.65618467835 20041.01181131273 19322.258885989446 19926.806307426006 18869.200136732514 18371.353399045012 0.9396460304375395 1.0311820523942565 0.9543298533992045 1.0095066320645565 0.9446702810017985 1.0172716064375438 1.090883800229683 1.0517602305224756 1.0846673010199592 1.0270990779434563 1.0 14.165170291799905 -7.51807833782844 24.44367565564522 1.0459099830786485 0.9797482441495918 0.5157270407057566 0.03442557179857286 125.46067827140018 638846.3147158283 0.006034438946653009 0.009090864736127077 3.0333439817244614e-08 7.51807833782844 -0.06616173892905663 SEDEAKFPT(ph)MNRR ddPTM_A549_MK2206_60min_R1 2 SEDEAKFPTMNRR 13 2 Q05655;Q05655-2;A0A494BZX2;C9K0E3;A0A494C1T7 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 SEDEAKFPT(1)MNRR;SEDEAKFPT(1)MNRR 59.261 0.0033640999999999996 13034200.0 2362.06 2226.56 2294.8 1860.98 2405.1400000000003 2617.5 2073.1499999999996 2294.55 3310.3 3138.8999999999996 3033.1 True False 2760.7179811775 2339.8823935933106 2620.2371466489917 2316.9201835425665 2051.3470920696923 2894.48211264412 2449.814519711737 2619.8094892646636 2560.5223354628565 2429.8203099392726 2279.897560698582 1.2108956247716631 1.0263103193445011 1.14927845523293 1.0162387220733902 0.899754062389163 1.2695667395500103 1.0745283305452948 1.1490908777769513 1.1230865717836414 1.065758546272032 1.0 11.154753288002857 -10.797970563024188 1.0662303252834497 1.0004875901354433 1.0993888621719712 0.05626552130390583 0.09695825854797584 0.8411706895377999 1.710922251279925 0.061228334779244796 0.015630706930773244 1.5923166524341044e-11 10.797970563024188 0.09890127203652788 SEDEDS(ph)LEEAGSPAPGPCPR ddPTM_A549_MK2206_60min_R1 3 SEDEDSLEEAGSPAPGPCPR 20 0 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 1 S(0.077)EDEDS(0.83)LEEAGS(0.093)PAPGPCPR;SEDEDS(1)LEEAGSPAPGPCPR;SEDEDS(1)LEEAGSPAPGPCPR 167.05 3.5853e-28 8679900.0 1279.2 1494.63 1967.5900000000001 1891.21 2309.3500000000004 1485.49 1640.52 1407.74 2482.54 2508.37 2019.74 True False 1495.0976865626856 1570.7002829191088 2246.6238484290934 2354.5565348996424 1969.6476741774477 1642.683565811544 1938.5812487651642 1607.2914560229403 1920.2486538017586 1941.7274748613763 1518.1828160117868 0.9847942361054085 1.0345923207359726 1.4798111431210212 1.5509044826926577 1.2973718668161738 1.0820064280050385 1.2769089653232601 1.0586942752027972 1.2648336113078822 1.2789813284557037 1.0 10.568129811827205 -11.407765123775636 0.4348561620779186 0.8617911666961556 1.2459694409685151 0.0 0.1908972476115605 4.458522420509199 0.7273800961442027 0.826060487168222 0.04744979494822527 3.910523285086298e-12 11.407765123775636 0.3841782742723595 SEDEDS(ph)LEEAGSPAPGPCPR ddPTM_A549_PD325901_60min_R1 2 SEDEDSLEEAGSPAPGPCPR 20 0 Q8TBB5-2;Q8TBB5-3;Q8TBB5 Q8TBB5-2 KLHDC4 Kelch domain-containing protein 4 1 SEDEDS(1)LEEAGSPAPGPCPR;SEDEDS(1)LEEAGSPAPGPCPR 237.46 3.061499999999999e-85 9321300.0 1641.4 1892.5900000000001 1922.23 1701.11 2013.66 2193.91 2132.2 1967.93 1365.21 2107.04 1956.94 True False 1808.0337196651842 2052.0852013451836 2052.684087108007 1806.1837011988816 1872.227468349876 2176.0435243485426 2213.3420377846096 1928.6780923387817 1307.8349713456607 1974.001134810305 1716.248786064749 1.0534799700053348 1.1956804969112236 1.1960294473475976 1.052402026946424 1.0908834916893233 1.2679068104910793 1.289639390137408 1.123775357045478 0.7620311122517641 1.1501835577909225 1.0 10.745042984589315 -8.652553696938757 6.6543505226197235 0.8880362513024751 1.1658100022727753 0.2691679253924264 0.11916687220468176 0.11469666352991893 6.402216174810823 0.018863186746188206 0.021375422532528478 2.225595851168695e-09 8.652553696938757 0.2777737509703002 SEDES(ph)ET(ph)EDEEEKSQEDQEQK ddPTM_A549_MK2206_60min_R1 2 SEDESETEDEEEKSQEDQEQK 21 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 S(0.001)EDES(0.999)ET(1)EDEEEKSQEDQEQK;SEDES(1)ET(1)EDEEEKSQEDQEQK 178.39 6.2443e-36 141044000.0 13068.400000000001 15362.3 13982.8 16839.6 17482.5 15430.5 14253.9 16831.6 18702.7 21320.0 24337.0 True False 15274.026428295656 16144.17545231142 15965.771297787815 20965.302755958364 14910.84740892771 17063.345268063083 16843.649124529893 19217.530844613146 14466.568312074785 16503.79719261693 18293.451232970026 0.8349450431074207 0.8825111919403705 0.8727588410989903 1.146055082169126 0.8150920905539192 0.9327570315059008 0.9207474800694154 1.0505142304683144 0.7908058532991247 0.9021696880724382 1.0 14.159039658407881 -7.381032036304596 0.004830893140832398 1.8152656942395857 1.2932907897536886e-06 0.008325376123901718 0.10115974869230618 50016.264593364045 87.74542263409262 16258.801563168929 16710.941730822884 4.1587993143147406e-08 7.381032036304596 -1.815264400948796 SEDES(ph)ET(ph)EDEEEKSQEDQEQK ddPTM_A549_PD325901_60min_R1 3 SEDESETEDEEEKSQEDQEQK 21 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 SEDES(1)ET(1)EDEEEKSQEDQEQK;S(0.01)EDES(0.991)ET(0.991)EDEEEKS(0.009)QEDQEQK;S(0.02)EDES(0.977)ET(0.886)EDEEEKS(0.118)QEDQEQK 148.87 3.6974e-22 220230700.0 19550.940000000002 13356.43 15920.460000000001 18566.32 20006.4 30841.99 18340.969999999998 20324.37 34267.7 18384.97 20414.13 True False 21535.73703615868 14482.023230495164 17000.918153103197 19713.119419227933 18601.21948233314 30590.823059069204 19038.945649913887 19918.984496190187 32827.54773813676 17224.13985660139 17903.32142583216 1.2028905991200838 0.8089014817998794 0.9495957620787105 1.1010872759500632 1.0389814850496961 1.7086674774732376 1.063430924188356 1.1125859846011414 1.833600981478827 0.9620639347819114 1.0 14.127939640785419 -7.051695114827059 19.24601999637091 1.371651998585453 1.0053736974520597 0.13127448870900837 0.2836236051874983 32.74420586796779 12190.425894436119 0.04940265399434804 0.08557307299022862 8.877790355614818e-08 7.051695114827059 -0.3662783011333932 SEDES(ph)ET(ph)EDEEEKSQEDQEQKR ddPTM_A549_MK2206_60min_R1 3 SEDESETEDEEEKSQEDQEQKR 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 SEDES(1)ET(1)EDEEEKSQEDQEQKR;S(0.004)EDES(0.781)ET(0.974)EDEEEKS(0.241)QEDQEQKR;S(0.005)EDES(0.997)ET(0.998)EDEEEKSQEDQEQKR 138.11 1.1705e-22 194050000.0 12887.599999999999 14655.300000000001 14803.7 12139.6 17669.6 13158.7 12992.800000000001 14178.7 19671.7 20527.1 22218.2 True False 15062.71180843126 15401.19217215258 16903.087261568613 15113.802544967355 15070.425246777588 14551.144899961873 15353.423578472693 16188.57414544765 15216.091359249811 15890.013853309894 16700.807748875148 0.9019151669143537 0.9221824718741463 1.0121119598366186 0.9049743444885363 0.9023770271107173 0.8712838994833612 0.9193222153884619 0.9693288126460831 0.9110991269434057 0.95145181551953 1.0 14.027630261117926 -10.851147277593752 0.7633284810738553 1.0079117480337 0.9234251916663715 0.17344398790679882 0.038463952977448625 0.7542808921777157 0.6540843710188451 0.04115551190281908 0.0069553842090068225 1.4088109625696271e-11 10.851147277593752 -0.0844865563673286 SEDES(ph)ET(ph)EDEEEKSQEDQEQKR ddPTM_A549_PD325901_60min_R1 2 SEDESETEDEEEKSQEDQEQKR 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 S(0.001)EDES(0.999)ET(1)EDEEEKSQEDQEQKR;SEDES(1)ET(1)EDEEEKSQEDQEQKR 150.36 1.3966000000000002e-27 502690000.0 12524.400000000001 11577.5 13081.1 13106.4 15406.1 15172.800000000001 13218.9 14674.4 15319.0 14670.0 14428.3 True False 13795.867868024035 12553.17655623978 13968.862109044463 13915.952561205933 14324.028684159697 15049.237747325806 13721.952473159636 14381.707580155897 14675.195703257486 13743.733696402143 12653.710568529455 1.090262638244247 0.9920549777280578 1.103934062138727 1.0997527156829199 1.1320022381248727 1.1893142067556193 1.0844212374579645 1.1365604975922299 1.1597543363885363 1.0861425683770294 1.0 13.627272881769574 -4.818766251108445 17.96880901297216 1.0896667156569626 2.1707423165125324 0.0 0.057797932348602 119713.97006586555 6689447.818360066 0.00969177720764572 2335544.629403339 1.5178671042674372e-05 4.818766251108445 1.0810756008555698 SEDES(ph)ETEDEEEK ddPTM_A549_MK2206_60min_R1 1 SEDESETEDEEEK 13 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 S(0.002)EDES(0.894)ET(0.104)EDEEEK 53.967 0.02086 923690.0 408.03 534.85 548.53 679.93 301.01 0.0 134.68 0.0 0.0 508.58 509.21 True False 476.895488624275 562.0715804709429 626.3198021837939 846.512880523218 256.7318277455359 0.0 159.14961267384263 0.0 0.0 393.6914247758498 382.75910351894913 1.2459415967899128 1.4684734479296757 1.6363289505739655 2.21160743857085 0.6707399651248946 0.0 0.4157957608602343 0.0 0.0 1.0285618843716395 1.0 8.58029288087786 -6.901096279587443 6.475837318232353 0.42702676545663154 1.6225803598604898 0.6775351545822267 0.39950178160340744 0.11292540222156652 6.373193641403898 0.06700003440861735 0.12752691199696173 1.2557515428349723e-07 6.901096279587443 1.1955535944038582 SEDES(ph)ETEDEEEK ddPTM_A549_PD325901_60min_R1 1 SEDESETEDEEEK 13 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 S(0.002)EDES(0.986)ET(0.012)EDEEEK 63.727 0.006355899999999999 1771900.0 544.44 408.99 161.77 347.2 396.99 665.56 526.73 328.3 490.84 486.54 329.56 True False 599.7111480044557 443.45702265052967 172.74868500203524 368.6457554515885 369.10679194115045 660.1399000257145 546.7749983877158 321.7517989536322 470.2117017420789 455.8197813665642 289.02620925296566 2.0749369046997668 1.5343142194499075 0.5976921105132015 1.2754751771626949 1.2770703144713618 2.284013971369418 1.8917834469093406 1.113227066103282 1.6268825687380257 1.5770880521344521 1.0 8.175056513797598 -10.839063572773984 0.9394706244038602 0.9810285167661986 1.5087833205806975 0.0 0.47563844418057466 1.022532036530636 1.5033828872512542 0.38486979939306704 0.08155155603250036 1.4485597953475955e-11 10.839063572773984 0.5277548038144989 SEDES(ph)ETEDEEEKS(ph)QEDQEQK ddPTM_A549_PD325901_60min_R1 1 SEDESETEDEEEKSQEDQEQK 21 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 S(0.013)EDES(0.954)ET(0.399)EDEEEKS(0.635)QEDQEQK 236.94 1.8624e-86 168730000.0 22308.0 22082.0 23949.0 21750.0 27758.0 25627.0 25059.0 25562.0 25908.0 23728.0 24471.0 True False 24572.691737718374 23942.927636785753 25574.323157036168 23093.44810216605 25808.3738399014 25418.302208604768 26012.633957810947 25052.14585699892 24819.176857496896 22229.81003055419 21461.222134449945 1.1449810073152284 1.1156367278055488 1.1916526932538385 1.07605466070341 1.2025584413700898 1.184382792804835 1.212076078186386 1.167321492692849 1.1564661463364054 1.0358128670999818 1.0 14.389444613943347 -10.488055291515181 0.7549288491377163 0.9968076940762738 1.1622952612694755 0.6656489122140995 0.038855613686386736 0.2933345086629829 0.2934572606239285 0.028038319501876723 0.0075249747607262505 3.2504591204476325e-11 10.488055291515181 0.16548756719320168 SEDES(ph)ETEDEEEKS(ph)QEDQEQKR ddPTM_A549_MK2206_60min_R1 1 SEDESETEDEEEKSQEDQEQKR 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 S(0.001)EDES(0.832)ET(0.566)EDEEEKS(0.602)QEDQEQKR 145.52 5.4471999999999995e-27 34210000.0 2792.1 3601.2 3564.1 3289.5 4075.7 3394.6 2996.0 2735.3 4188.1 4674.2 5436.5 True False 3263.3382197089395 3784.4856980311447 4069.542972970047 4095.427647671265 3476.169929047144 3753.814318846886 3540.3344191478486 3123.0371515049287 3239.502037021413 3618.294973627113 4086.467010233042 0.7985720211461682 0.9261021044717364 0.995858516116583 1.0021927590301805 0.8506541030044693 0.9185965063334293 0.8663558057075692 0.764238924157332 0.7927390650430508 0.8854335455459287 1.0 11.99663837244512 -6.788806785348144 24.983612263934507 0.8849621297200477 0.9350098924738686 0.1069334190901502 0.07738826597085509 550.1955946226794 502270.31438010826 0.014345210983761802 0.027114321584825952 1.6262721121972224e-07 6.788806785348144 0.050047762753820835 SEDES(ph)ETEDEEEKS(ph)QEDQEQKR ddPTM_A549_PD325901_60min_R1 2 SEDESETEDEEEKSQEDQEQKR 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 2 S(0.002)EDES(0.976)ET(0.023)EDEEEKS(0.999)QEDQEQKR;SEDES(0.938)ET(0.078)EDEEEKS(0.984)QEDQEQKR 235.73 7.631199999999998e-98 236241000.0 17600.7 19290.1 20130.6 18583.2 22249.3 20350.0 17623.7 21223.6 20392.2 21728.8 20673.0 True False 19387.51010704949 20915.744425611836 21496.783571131666 19731.042058490668 20686.58592391808 20184.276347020987 18294.37954755868 20800.2786484079 19535.186749785717 20356.8398597398 18130.352056944303 1.0693399690285479 1.1536314551377214 1.1856793240205146 1.0882878609592839 1.1409919597228497 1.1132865089230293 1.0090471210983216 1.1472628100699767 1.0774852406852924 1.122804443940332 1.0 14.146119319296512 -10.3361549147519 0.23212069867012985 0.9421115794770396 1.144197461766589 0.0 0.05749404224810645 2.875615470661795 0.26025845354137905 0.1749147127771423 0.04373886689653641 4.611530498975503e-11 10.3361549147519 0.2020858822895495 SEDES(ph)ETEDEEEKSQEDQEQK ddPTM_A549_MK2206_60min_R1 3 SEDESETEDEEEKSQEDQEQK 21 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 S(0.002)EDES(0.976)ET(0.022)EDEEEKSQEDQEQK;SEDES(0.584)ET(0.416)EDEEEKSQEDQEQK;SEDES(0.997)ET(0.003)EDEEEKSQEDQEQK 204.31 1.7949e-56 102430000.0 4072.0 5102.7 4230.42 4344.1 5106.6 4857.92 4018.33 4728.27 3815.53 5868.1 6274.8 True False 4759.25404915827 5362.405634606115 4830.357168348801 5408.404695014062 4355.425904672116 5371.98186997369 4748.408546893985 5398.516752219577 2951.318547149379 4542.492134427552 4716.593984330046 1.0090446760882863 1.1369233078831147 1.0241197746502477 1.146675909137488 0.9234260822835633 1.138953636420909 1.0067452408813726 1.144579493201044 0.6257308890598923 0.9630873782053505 1.0 12.203529700241381 -8.742848820695322 24.997164809767263 0.8232617832003641 1.0656082907693265 0.37638084591028376 0.11349063440576938 184.40686776741194 247956.3516463338 0.024013568291360695 0.027205129113642982 1.807803318636856e-09 8.742848820695322 0.24234650756896237 SEDES(ph)ETEDEEEKSQEDQEQK ddPTM_A549_PD325901_60min_R1 1 SEDESETEDEEEKSQEDQEQK 21 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.964)ET(0.036)EDEEEKSQEDQEQK 207.64 6.789799999999999e-58 70350000.0 2610.5 3227.5 2849.6 3468.4 3684.6 2495.2 3446.5 3363.1 3983.8 3888.3 2949.1 True False 2875.516038251472 3499.492751912234 3042.99099203684 3682.6351906920763 3425.8064071799386 2474.8799184809236 3577.658443497167 3296.0203321990903 3816.374740037678 3642.792074418573 2586.379395885183 1.1117920452143613 1.3530469495232504 1.1765447083587606 1.4238573028191412 1.324556796512626 0.9568897441799722 1.383269001133038 1.274376194553249 1.4755664795773442 1.408452325368079 1.0 11.33671820420877 -11.065816362928006 1.3966542584206143 1.000931337216815 1.2990862511576104 0.0 0.18594159695400725 0.3749937252292088 1.3120470264853288 0.10339234848212042 0.023201287963976653 8.593768235734175e-12 11.065816362928006 0.2981549139407955 SEDES(ph)ETEDEEEKSQEDQEQKR ddPTM_A549_MK2206_60min_R1 2 SEDESETEDEEEKSQEDQEQKR 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 S(0.11)EDES(0.463)ET(0.427)EDEEEKSQEDQEQKR;SEDES(0.998)ET(0.002)EDEEEKSQEDQEQKR 268.97 2.2191999999999993e-124 132297000.0 11429.4 11676.56 10107.890000000001 9751.6 14920.47 11140.77 10484.25 9211.51 14569.7 17867.7 18218.3 True False 13358.403297998411 12270.847029379818 11541.340793202835 12140.742437765957 12725.688628027096 12319.678886755397 12389.10251466985 10517.269751566255 11269.686213029985 13831.374160343421 13694.193310499142 0.9754793871470118 0.8960620571911991 0.8427908480271162 0.886561344833494 0.9292762515825224 0.8996279377267207 0.9046975045380221 0.768009441162395 0.8229536386338053 1.0100174465727094 1.0 13.741276662663191 -10.940723967141707 1.245684899045907 0.998887235046753 0.8744705151186767 0.4447124151170192 0.052879599640126014 0.3656179883932847 1.0227338914014577 0.037798508941966735 0.009194101876066996 1.1462412484637096e-11 10.940723967141707 -0.12441671992807635 SEDES(ph)ETEDEEEKSQEDQEQKR ddPTM_A549_PD325901_60min_R1 1 SEDESETEDEEEKSQEDQEQKR 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.558)ET(0.437)EDEEEKS(0.005)QEDQEQKR 65.779 0.00032005 4538800.0 654.63 553.0 641.68 708.25 767.85 584.29 701.48 1007.8 840.99 671.56 1174.3 True False 721.0875556868648 599.603250753669 685.228263535303 751.9969939475445 713.9188649386944 579.531735960732 728.1752052645852 987.6986383961939 805.6461149215039 629.157586990853 1029.8685445010242 0.7001743664636683 0.5822133843734196 0.6653550758434894 0.7301873602828508 0.6932135841517435 0.5627239894403394 0.7070564579845375 0.9590531176721571 0.7822805339800363 0.6109105772287498 1.0 10.008244483915519 -9.743690543367494 0.2448857666837922 1.0969535300366484 0.6035500614770354 0.0 0.13974670050169238 1.3158708847802225 0.1826427832885423 0.21893818768060627 0.08768054284916298 1.8043029393934718e-10 9.743690543367494 -0.49340346855961303 SEDESET(ph)EDEEEK ddPTM_A549_PD325901_60min_R1 1 SEDESETEDEEEK 13 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.447)ET(0.553)EDEEEK 82.36200000000001 0.00056881 1975500.0 513.3 612.66 480.25 366.2 626.93 347.44 413.0 532.01 484.82 266.43 259.66 True False 565.4098381285121 664.2910083304572 512.842652977854 388.81934229945784 582.8965995910868 344.6105638333649 428.71694100227194 521.3986431962292 464.4447014069653 249.60756433077165 227.72346612035776 2.4828791154517136 2.917095105075215 2.2520413100809002 1.7074188660643201 2.5596685731237323 1.5132852564751902 1.8826208308970842 2.28961315265005 2.039511822472851 1.0960994428165236 1.0 7.831139153674014 -11.253272933942357 0.18986341335443258 6.288833047835255e-26 2.5752336672898704 0.6407956324908926 0.34682528545993363 5.662152257784389 0.2440698645782671 3.5868481477329097 0.5270630646375627 5.581193323792611e-12 11.253272933942357 2.5752336672898704 SEDESET(ph)EDEEEKSQEDQEQK ddPTM_A549_MK2206_60min_R1 1 SEDESETEDEEEKSQEDQEQK 21 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.027)ET(0.973)EDEEEKSQEDQEQK 156.88 7.6437e-28 14599000.0 1151.7 1301.2 1113.2 1052.6 1823.1 1372.5 1557.1 1269.9 1151.5 1913.2 1731.0 True False 1346.0788036384038 1367.4255221254389 1271.0684990629493 1310.4870472530088 1554.9244050459668 1517.7370390082344 1840.004914571134 1449.912213905645 890.6870885676459 1481.0067912248921 1301.1449268303854 1.0345341059873154 1.0509402096017961 0.9768846443257455 1.007179923027776 1.1950432061659673 1.1664627111950332 1.4141429418269509 1.114335677761631 0.6845410301351881 1.138233536238468 1.0 10.345565948927383 -8.711143504214544 13.287960776578629 0.8510462560478272 1.1230350242454044 0.14356235771465076 0.15727503608868246 0.9807713752386396 258.1019604802584 0.02752687832468377 0.03120702678902112 1.9447173811866714e-09 8.711143504214544 0.2719887681975771 SEDESET(ph)EDEEEKSQEDQEQK ddPTM_A549_PD325901_60min_R1 3 SEDESETEDEEEKSQEDQEQK 21 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.151)ET(0.849)EDEEEKSQEDQEQK;SEDES(0.002)ET(0.998)EDEEEKSQEDQEQK;SEDES(0.15)ET(0.85)EDEEEKSQEDQEQK 287.48 1.1511999999999997e-128 104237000.0 10434.3 9478.5 9868.3 8662.2 11584.2 8428.2 10197.0 10968.900000000001 10600.6 10312.8 10216.3 True False 11493.582454674332 10277.286459798643 10538.022180908598 9197.244420716452 10770.565755320475 8359.5635335608 10585.052415012511 10750.11668456442 10155.093646579498 9661.64804800654 8959.759866461567 1.2828002787995962 1.14704931973332 1.1761500685252546 1.0265056829417765 1.2021042880442776 0.9330120068119863 1.1813991192592992 1.1998219645154296 1.1334113634665968 1.0783378340498053 1.0 13.129244351307966 -14.999999999999998 0.19210539774798496 0.3749957419860051 1.1649037535000841 0.14371507475559375 0.09132582054949911 49.10412079071509 0.5657678140927797 11.533052762919624 0.08211517372354561 1.000000000000004e-15 14.999999999999998 0.7899080115140791 SEDESET(ph)EDEEEKSQEDQEQKR ddPTM_A549_MK2206_60min_R1 1 SEDESETEDEEEKSQEDQEQKR 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.027)ET(0.973)EDEEEKSQEDQEQKR 102.95 2.51e-10 33893000.0 1535.6 1804.8 1833.6 1376.9 2025.8 1730.1 1782.3 2018.7 2293.2 2200.8 3213.3 True False 1794.7717381845387 1896.6566110759243 2093.632051636564 1714.2405618113903 1727.8075035610336 1913.1780336525665 2106.1208395351177 2304.856907009468 1773.7938614879083 1703.637751478018 2415.348927431587 0.7430693419907026 0.7852516005183461 0.8668031470976214 0.7097279164688908 0.7153448861727546 0.7920917809945519 0.8719737407773652 0.9542542200974611 0.7343841054775097 0.7053381530632998 1.0 11.238015904163097 -7.709152973506093 4.136492322205397 0.8786913571451657 0.7669644351818602 0.15972149386975087 0.08955221937121982 0.26735351410203473 9.460067737752352 0.01594085569415036 0.023608514899009513 1.9536511911879147e-08 7.709152973506093 -0.11172692196330547 SEDESET(ph)EDEEEKSQEDQEQKR ddPTM_A549_PD325901_60min_R1 2 SEDESETEDEEEKSQEDQEQKR 22 2 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.024)ET(0.976)EDEEEKSQEDQEQKR;SEDES(0.027)ET(0.973)EDEEEKSQEDQEQKR 117.08 1.9456e-15 100753000.0 2625.1000000000004 2794.3 2817.0 3271.7 3383.3 3004.0 3748.1 3863.5 3012.3 3051.3999999999996 3248.5 True False 2891.5982195035212 3029.785467596705 3008.1785599971145 3473.7854784301912 3145.6686797513676 2979.536419973026 3890.735996539016 3786.439461642883 2885.7035065554237 2858.734083244818 2848.9550939381566 1.014967987967272 1.0634725250823747 1.0558883733891575 1.2193191411902256 1.1041482143556918 1.0458348137226567 1.365671226204127 1.3290625288195845 1.0128989090405316 1.0034324827820096 1.0 11.476217166322689 -8.948890471587982 24.999992371459538 1.0056901892285441 1.1497310718099132 0.2579273083626451 0.10910803810437707 105.71914677006038 51712.07450587559 0.019804903184505358 0.021081617329441017 1.1248886334095654e-09 8.948890471587982 0.14404088258136905 SEDFGVNEDLADS(ph)DAR ddPTM_A549_MK2206_60min_R1 1 SEDFGVNEDLADSDAR 16 0 P04083 P04083 ANXA1 Annexin A1 1 SEDFGVNEDLADS(1)DAR 90.367 1.0587e-05 783020.0 449.48 515.8 257.91 479.69 520.04 430.89 330.86 274.81 470.19 596.35 518.38 True False 525.3412352690715 542.0520168400718 294.48551616360527 597.2140715341025 443.5428048928222 476.4864937983667 390.97297927879106 313.7651590703286 363.6927157391415 461.63412081693724 389.6519394398241 1.3482320555732856 1.3911184880007086 0.7557655598659843 1.532685997643631 1.1383051385050804 1.2228515902766421 1.0033903073621708 0.8052446999786714 0.9333784306630106 1.184734564597823 1.0 8.606042186953403 -7.803698040351295 4.277210129356417 0.9534065571554234 1.2279478518930504 0.26780426642534827 0.20077033424006346 0.18052790194774737 7.100208319640787 0.02760866378257639 0.039345545573473355 1.571455038075058e-08 7.803698040351295 0.274541294737627 SEDFGVNEDLADS(ph)DAR ddPTM_A549_PD325901_60min_R1 2 SEDFGVNEDLADSDAR 16 0 P04083 P04083 ANXA1 Annexin A1 1 SEDFGVNEDLADS(1)DAR;SEDFGVNEDLADS(1)DAR 128.9 5.3023e-10 2866900.0 743.15 836.3299999999999 744.53 963.95 936.78 642.1800000000001 753.02 662.6800000000001 852.48 774.02 937.04 True False 818.5940409218846 906.8104642003904 795.0582830225953 1023.4910022107102 870.9838045155574 636.9502989941009 781.6765881683549 649.4623275375973 816.6532301790556 725.1482451049204 821.7900203859658 0.9961109536684564 1.103457625068863 0.9674713288063348 1.2454410212112488 1.0598617443741736 0.7750767023125297 0.9511877350387256 0.790302037535778 0.9937492667476083 0.882400889663206 1.0 9.68262600065618 -7.026048813276978 24.992084613997363 0.9602722874602423 1.0821046780923829 0.34010918510926746 0.10431735161514577 821.2936061333118 787975.2108211884 0.015271522716451349 0.026511878429793485 9.417837371671422e-08 7.026048813276978 0.12183239063214057 SEDFGVNEDLADSDAR ddPTM_A549_MK2206_60min_R1 3 SEDFGVNEDLADSDAR 16 0 P04083 P04083 ANXA1 Annexin A1 0 ;; 137.16 4.2818e-10 16278100.0 2401.65 2187.3100000000004 2106.52 1888.4499999999998 2540.64 2110.16 2070.91 2594.2599999999998 2906.27 2910.02 3368.6099999999997 False True 2806.989805294931 2298.6347362436168 2405.2562115038468 2351.120334775741 2166.915221565457 2333.4557305891567 2447.167540706766 2962.0042995880444 2248.0044853595246 2252.6444609033374 2532.0911680936492 1.1085658528670777 0.9078009375050282 0.9499090087323777 0.9285291005322858 0.8557808853292103 0.9215528097852652 0.9664610704160308 1.169785802703963 0.8878055078293224 0.8896379756339103 1.0 11.306113634684555 -11.345038505847503 1.9857396396916758 1.000335605295867 0.950068072626317 0.0 0.09593084839944668 1.110419912065102 7.9067793948690275 0.07021964716481238 0.0133761618254504 4.518158832516355e-12 11.345038505847503 -0.050267532669549975 SEDFGVNEDLADSDAR ddPTM_A549_PD325901_60min_R1 2 SEDFGVNEDLADSDAR 16 0 P04083 P04083 ANXA1 Annexin A1 0 ; 244.44 3.1643999999999997e-65 14273200.0 2443.3999999999996 2142.52 2033.6 2377.65 2450.0 2408.86 2720.1 2254.44 1956.71 2608.61 2826.8 False True 2691.45216926399 2323.077679574595 2171.612325030222 2524.5120404650625 2277.9204520411568 2389.2430428149883 2823.6148939958343 2209.473425626035 1874.4762833423192 2443.9019194118328 2479.12152056161 1.0856475356053863 0.9370568002847778 0.8759604186479225 1.0183091145500482 0.9188417885723996 0.9637458361757673 1.1389578407419836 0.8912324011956905 0.7561050427724427 0.9857935156233089 1.0 11.275613275253612 -8.483409832529741 24.962583401033125 0.8816084596159217 0.9842736568706275 0.1321865057519781 0.09275989175985436 719.4577555769918 455030.4891905585 0.017875546479238953 0.021608668418004736 3.2854144843070755e-09 8.483409832529741 0.1026651972547058 SEDIY(ph)ADPAAYVMR ddPTM_A549_PD325901_60min_R1 1 SEDIYADPAAYVMR 14 0 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 SEDIY(1)ADPAAYVMR 76.282 0.00084438 1328300.0 1029.4 888.48 684.17 1100.5 795.63 917.89 849.75 1060.3 1043.4 991.26 1224.0 True False 1133.9039301957725 963.3553277208316 730.6018904484301 1168.4753855831607 739.7476935744926 910.41500816546 882.0877012510415 1039.1514847107417 999.5495265212397 928.6716744305099 1073.4557595752822 1.0563117483708941 0.8974336567927007 0.6806073598575653 1.0885175054121219 0.6891273226454877 0.8481160029600754 0.8217271120703136 0.9680431405220526 0.9311511141518456 0.8651233794655341 1.0 10.068047019168926 -8.276799970203676 23.31437047608669 0.9666212463622501 0.8634355391884309 0.05884781567134234 0.12339105905125793 468.3093994806004 710800.2452037587 0.01838865016833402 0.022283015086872974 5.286887021234563e-09 8.276799970203676 -0.10318570717381925 SEDLLDYGPFR ddPTM_A549_PD325901_60min_R1 2 SEDLLDYGPFR 11 0 P04843;B7Z4L4 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 0 ; 56.916000000000004 0.014509999999999999 637910.0 649.89 561.29 472.73 661.03 812.84 716.74 673.42 681.0 680.43 666.44 564.56 False True 715.8663543762686 608.5918781474264 504.81230055642067 701.8603217919457 755.748922545769 710.9031070743897 699.0473666095631 667.4169207658354 651.833893359064 624.360864664638 495.1226990407038 1.4458362659665045 1.2291738579680718 1.0195701015818712 1.4175482625858082 1.5263871440554562 1.4358119885268008 1.411866933113674 1.3479828778986505 1.316509815894094 1.261022501845163 1.0 8.9516422813547 -10.369483897670383 0.7201226772419416 0.9963291278997585 1.350620141188616 0.18041828849003316 0.14798211008977505 0.4978847422099473 0.46614847202906734 0.09668271364829521 0.02833991763168605 4.27086754236003e-11 10.369483897670383 0.3542910132888576 SEDMPFS(ph)PK ddPTM_A549_MK2206_60min_R1 7 SEDMPFSPK 9 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.002)EDMPFS(0.998)PK;S(0.014)EDMPFS(0.986)PK;S(0.003)EDMPFS(0.997)PK;S(0.001)EDMPFS(0.999)PK;S(0.006)EDMPFS(0.994)PK;SEDMPFS(1)PK;SEDMPFS(1)PK 157.97 1.1288e-05 375642000.0 66530.9 67942.9 64813.2 55149.8 85992.3 65200.9 61121.600000000006 63683.600000000006 93813.1 93337.4 95433.79999999999 True False 77759.68939566407 71400.90340241048 74004.68634878437 68661.50347576862 73342.94658331084 72100.4159611455 72226.60354919467 72710.94532284554 72564.58263873687 72252.41651436032 71734.9536211125 1.0839860551994338 0.9953432712807428 1.0316405408116673 0.9571554731661621 1.0224157524474247 1.0050946201479867 1.006853701065717 1.0136055249563276 1.0115651990521426 1.0072135391064856 1.0 16.130388638339895 -5.256968719488854 24.80781758657446 1.0053322785209886 1.0839860903877971 0.6147189367303589 0.017955486455428406 185.56433504041834 1029660.1201722142 0.00214937067837352 0.023963793384401265 5.533899662674546e-06 5.256968719488854 0.07865381186680853 SEDMPFS(ph)PK ddPTM_A549_PD325901_60min_R1 8 SEDMPFSPK 9 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK 181.44 5.915e-11 699903000.0 104138.20000000001 107442.0 108251.0 111122.70000000001 129753.2 113607.6 112064.8 115394.40000000001 116555.9 124880.1 135001.3 True False 114710.2334015089 116496.51440773177 115597.56382614392 117986.49680103768 120639.78285623956 112682.41737207986 116329.48728821185 113092.76816684427 111657.46085706046 116995.14917382892 118396.99594375041 0.9688610127912952 0.9839482284084171 0.9763555477460214 0.9965328584611407 1.0189429376532042 0.95173375366394 0.9825374905920685 0.9551996422322561 0.9430768066962454 0.988159777545475 1.0 16.853272950741214 -8.048017826367659 24.63673537075238 0.9709218691657986 0.9832989299858671 0.059803096851090864 0.02102876212637464 902.9282877442297 463267.2464930747 0.004157542275752205 0.00536741503426132 8.953280145094743e-09 8.048017826367659 0.012377060820068508 SEDPPGQEAGS(ph)EEEGSSASGLAK ddPTM_A549_MK2206_60min_R1 1 SEDPPGQEAGSEEEGSSASGLAK 23 0 K7EIG1;I3L2B0;A0A494C0R8;O75153 K7EIG1 CLUH Clustered mitochondria protein homolog 1 SEDPPGQEAGS(1)EEEGSSASGLAK 115.45 1.1425000000000001e-15 8005100.0 2424.1 2683.2 2124.2 1704.4 3138.1 2297.2 1880.6 2075.7 3429.6 2843.8 3667.3 True False 2833.228816445128 2819.7634191261714 2425.443501356017 2121.978076513423 2676.489647015932 2540.2881792420517 2222.2806771193086 2369.9368315646484 2652.8010759458098 2201.3836048951225 2756.608197669022 1.0277952517303315 1.0229104816239585 0.8798651558124811 0.7697786280646484 0.9709358222467603 0.9215267448562731 0.8061648655759136 0.8597292983343293 0.9623424461223792 0.7985841465452379 1.0 11.428678513400047 -8.9466573709828 5.207787180424797 0.9839085955043381 0.90487342311438 0.0 0.0948792643221779 0.26764566318818117 14.414182054305849 0.014290942659857135 0.014931081832222142 1.1306875990445808e-09 8.9466573709828 -0.07903517238995805 SEDPPTT(ph)PIR ddPTM_A549_MK2206_60min_R1 2 SEDPPTTPIR 10 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C151 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SEDPPT(0.178)T(0.822)PIR;SEDPPT(0.283)T(0.717)PIR 92.538 0.00065487 344610000.0 2081.1 2438.8 2194.61 1779.48 2721.36 1948.92 1593.21 2002.62 2771.8 2433.4 3329.5 True False 2432.3388019899985 2562.9245030429756 2505.8386981032513 2215.452679883892 2321.0515489637946 2155.1534208116063 1882.6756341557223 2286.497517766535 2143.9917256550607 1883.6932499303025 2502.6932604747385 0.9718885012415007 1.024066570010586 1.0012568210727975 0.8852274127527879 0.927421504512907 0.8611336654188269 0.7522598409837071 0.9136147660911538 0.8566737919965328 0.7526664492527473 1.0 11.289265764377904 -6.2514943970738 23.01991327148741 0.9088130288325904 1.001570256654542 0.27268778012737693 0.07658052508221798 277.7787200164187 642975.0468993678 0.01058791266015103 0.027591766111156057 5.604096472825282e-07 6.2514943970738 0.0927572278219515 SEDPPTT(ph)PIR ddPTM_A549_PD325901_60min_R1 2 SEDPPTTPIR 10 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C151 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SEDPPT(0.035)T(0.965)PIR;SEDPPT(0.165)T(0.835)PIR 94.309 0.0006156000000000001 354370000.0 1556.49 1822.66 1711.18 2041.51 2688.6 1615.69 1656.42 1956.17 1900.6 2257.3 2304.3 True False 1714.5037189726224 1976.261954825826 1827.3109649612586 2167.6094360943903 2499.7620111664705 1602.532356320312 1719.4559695278026 1917.1526547643225 1820.724391514538 2114.773692766771 2020.885708161213 0.8483922232953169 0.9779187149697893 0.9042129189106461 1.0726036743892262 1.236963575461664 0.7929851499511285 0.850842757996602 0.948669510117286 0.9009536680682452 1.0464588295252908 1.0 10.980772016606554 SEDRRS(ph)S(ph)EEREAGEI ddPTM_A549_MK2206_60min_R1 2 SEDRRSSEEREAGEI 15 3 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 2 S(0.089)EDRRS(0.933)S(0.978)EEREAGEI;S(0.085)EDRRS(0.929)S(0.986)EEREAGEI 75.312 0.00025767 1410300000.0 3768.0 3781.7000000000003 3602.5 2743.1 5206.1 3689.2000000000003 3962.8999999999996 4301.799999999999 6276.1 5220.5 5933.5 True False 4403.946281244688 3974.1723770533126 4113.388670386521 3415.1596231424396 4440.289586478966 4079.588695307233 4682.907633391527 4911.593323709979 4854.5733708722555 4041.1854242052877 4460.048193730846 0.9874212317783884 0.8910604111048638 0.9222744893582993 0.7657225829852853 0.995569866872817 0.9146961014998904 1.0499679442867766 1.101242208685959 1.0884576040447196 0.9060855956412485 1.0 12.122843584153147 -7.754111402201495 6.853327674216727 1.0489127321511595 0.9089573166520272 0.36095904462810013 0.07494615346437646 0.08732927697827644 19.606688040493015 0.009937502323831568 0.014367860594561709 1.761524134527724e-08 7.754111402201495 -0.13995541549913237 SEDRRS(ph)S(ph)EEREAGEI ddPTM_A549_PD325901_60min_R1 2 SEDRRSSEEREAGEI 15 3 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 2 S(0.54)EDRRS(0.595)S(0.866)EEREAGEI;S(0.08)EDRRS(0.945)S(0.975)EEREAGEI 58.339 0.0032967 1899490000.0 3720.6 3551.3 3955.5 3738.8 3796.0 3207.8 3491.8 4269.0 4212.4 4504.9 4231.7 True False 4098.312573039045 3850.5805142884337 4223.944016353777 3969.737184569123 3529.3820554890763 3181.6767403427 3624.6823597862767 4183.851446034287 4035.367477015593 4220.459845188954 3711.227726956473 1.10430102234659 1.0375489723575229 1.1381527427361016 1.0696560482492004 0.9510012090752173 0.8573111041482625 0.9766801248703832 1.1273496949930921 1.0873403018911325 1.137213923719549 1.0 11.857680814522825 -6.536810178325831 24.581730757327485 1.0239101820241177 1.0904471808691554 0.14852885054046905 0.0790282843735272 309.7345713354466 546519.2463593667 0.011596731355027637 0.024150252033969043 2.9052922237363987e-07 6.536810178325831 0.06653699884503772 SEDRRS(ph)SEER ddPTM_A549_MK2206_60min_R1 1 SEDRRSSEER 10 2 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 SEDRRS(0.5)S(0.5)EER 61.235 0.0025014 8878500.0 772.4 790.79 579.24 434.89 128.74 0.0 0.0 0.0 171.65 1326.6 1166.9 True False 902.7622366330662 831.0378332628153 661.3849419666035 541.4380695229536 109.8025165408468 0.0 0.0 0.0 132.77154906872465 1026.9201386362856 877.1265251983689 1.029226925304647 0.947454910310539 0.7540359605668364 0.617286165642412 0.12518435298261457 0.0 0.0 0.0 0.15137103400070742 1.1707776576521156 1.0 9.776641155717403 -10.894289821836411 1.1996343915099406 0.993003399741889 0.3734839824895094 0.31981196100038767 0.37404587906967973 0.5573231793080841 1.4496795492963903 0.27669573722811097 0.06938412436979152 1.2755872750139391e-11 10.894289821836411 -0.6195194172523796 SEDRRS(ph)SEER ddPTM_A549_PD325901_60min_R1 2 SEDRRSSEER 10 2 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 S(0.012)EDRRS(0.494)S(0.494)EER;SEDRRS(0.5)S(0.5)EER 93.959 0.00019312 47515000.0 1429.9499999999998 1405.83 1430.02 1046.3 1047.53 1046.6399999999999 677.79 912.96 1573.8400000000001 1372.1 1546.88 True False 1575.1174713264472 1524.304227860814 1527.0697566088313 1110.9275746802912 973.955106582316 1038.1165108523855 703.5836693509195 894.7502965967349 1507.6969779760286 1285.465371835949 1356.6235664802398 1.1610571349671375 1.1236014658182754 1.1256400038595926 0.818891549674751 0.7179258348793415 0.7652207557810448 0.5186285176929128 0.6595420562523212 1.11135986078124 0.947547575906476 1.0 10.405804744467133 -6.192225567164608 8.902985176118696 0.9305110178904924 1.1363054042398737 0.24683533436816063 0.18259260366719193 0.6787686346560308 82.73629385016052 0.03245464982045139 0.08610709238177715 6.423539999637806e-07 6.192225567164608 0.2057943863493813 SEDRRS(ph)SEEREAGEI ddPTM_A549_MK2206_60min_R1 4 SEDRRSSEEREAGEI 15 3 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 SEDRRS(0.849)S(0.151)EEREAGEI;S(0.005)EDRRS(0.862)S(0.133)EEREAGEI;SEDRRS(0.876)S(0.124)EEREAGEI;S(0.008)EDRRS(0.847)S(0.145)EEREAGEI 81.317 0.00032033 255907000.0 1080.31 1229.38 1285.92 1302.94 2028.17 1172.32 944.1800000000001 1164.33 1541.23 2028.1100000000001 2164.8 True False 1262.6399169563285 1291.9501908934603 1468.282792234124 1622.1603584911984 1729.8288797005532 1296.3741242769645 1115.7252843361202 1329.3773431110778 1192.1438658385703 1569.9585424164327 1627.2204145594565 0.7759489161142118 0.7939613953548111 0.9023256954600325 0.9968903683711293 1.0630575085114553 0.7966801010347063 0.6856632785289783 0.8169620607119689 0.732625927730463 0.9648100087543908 1.0 10.66819396864992 SEDRRS(ph)SEEREAGEI ddPTM_A549_PD325901_60min_R1 3 SEDRRSSEEREAGEI 15 3 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 SEDRRS(0.88)S(0.119)EEREAGEI;S(0.005)EDRRS(0.961)S(0.035)EEREAGEI;SEDRRS(0.872)S(0.127)EEREAGEI 84.035 0.00018012 254818000.0 1578.0299999999997 1586.13 1550.31 1865.9699999999998 1324.17 2069.3 1789.0700000000002 1613.51 1649.88 1506.3400000000001 1832.9199999999998 True False 1738.2304439157126 1719.7987416237188 1655.5233593713622 1981.2267289746553 1231.164867338506 2052.4483068742284 1857.1540378666693 1581.3272772758926 1580.5412812122518 1411.2294353264076 1607.482459837195 1.081337113993617 1.0698709221361578 1.0298858001467914 1.2325028598914312 0.7658962993992467 1.2768091460743525 1.155318384036838 0.9837291023605002 0.9832401414646404 0.8779128050139572 1.0 10.650587280228402 -8.290946504604891 23.86518377775255 0.9912377351367931 1.0849933361217152 0.16872102336077888 0.12850166443855873 630.5250754833207 509962.84872704983 0.018791353804249768 0.022719686734699263 5.117448672135627e-09 8.290946504604891 0.09375560098492208 SEDRRSS(ph)EER ddPTM_A549_PD325901_60min_R1 1 SEDRRSSEER 10 2 Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;Q9Y383 Q96HJ9-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 S(0.002)EDRRS(0.429)S(0.569)EER 44.61600000000001 0.017986000000000002 4538700.0 452.61 345.78 323.69 410.94 478.03 129.03 281.0 267.83 273.07 466.67 491.78 True False 498.5586340061287 374.9200941150153 345.6575499060936 436.3228304875453 444.454821913973 127.97922245976017 291.6936087691002 262.4879205414295 261.5938175265046 437.2043765575998 431.2941776502714 1.1559595743265536 0.8692908774183155 0.8014426528762023 1.01165944985548 1.030514310059556 0.2967330167937861 0.6763216938338297 0.6086052957438164 0.6065322257575808 1.0137034052709166 1.0 8.752528430002535 -2.0000229419515465 0.6679328130754657 0.7688113316692229 38.25149504842302 0.20878319232914555 0.2164068383535385 300.1905815768064 1.6724781988285855 0.03816457799587422 16735.50099508438 0.009999471755996227 2.0000229419515465 37.4826837167538 SEDSIAGSGVEHS(ph)TPDTEPGKEESWVSIK ddPTM_A549_PD325901_60min_R1 1 SEDSIAGSGVEHSTPDTEPGKEESWVSIK 29 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SEDSIAGSGVEHS(0.498)T(0.498)PDT(0.003)EPGKEES(0.001)WVSIK 64.70100000000001 0.00028939 6763800.0 3558.2 4343.6 4602.9 6159.0 5672.7 7277.8 4963.3 5071.4 7993.6 4671.1 5469.1 True False 3919.4258445916025 4709.650415865528 4915.280473486234 6539.427441896124 5274.269121752602 7218.532009746904 5152.181097521974 4970.246948563665 7657.656790492797 4376.165948825087 4796.435371481352 0.8171538947226781 0.9819063640194486 1.0247777970097358 1.3633932150484618 1.0996226808584462 1.5049784789485239 1.0741687729508074 1.0362376564303903 1.5965307978553607 0.9123788000657522 1.0 12.227746902498794 -5.893585422809988 1.700160228038011 1.2630172187726831 0.8487037991348216 0.19083185640437483 0.21367422471901315 0.42523768899884984 2.2203211844774047 0.03414813068083622 0.1925062974838075 1.2776578781193835e-06 5.893585422809988 -0.4143134196378615 SEEDNEIES(ph)EEEVQPK ddPTM_A549_MK2206_60min_R1 4 SEEDNEIESEEEVQPK 16 0 P52701;P52701-2;P52701-3;A0A087WWJ1;A0A494C0M1;C9J7Y7 P52701 MSH6 DNA mismatch repair protein Msh6 1 SEEDNEIES(1)EEEVQPK;SEEDNEIES(1)EEEVQPK;SEEDNEIES(1)EEEVQPK;SEEDNEIES(1)EEEVQPK 214.22 2.4588999999999996e-46 24704100.0 2913.5 3071.86 2487.35 2448.0499999999997 4359.7699999999995 3553.5299999999997 2622.34 3521.97 4324.45 4111.450000000001 3724.0 True False 3405.227571763905 3228.204553025092 2840.0936320016417 3047.8223598971394 3718.453608352397 3929.562185957693 3098.785233881232 4021.2200330807636 3344.9689797276237 3182.670589473963 2799.2280228286304 1.21648809743013 1.1532481550977685 1.0145988854211727 1.0888081767691449 1.328385389838619 1.403802103262333 1.1070142227105522 1.436546076377624 1.1949612366153437 1.1369815404526646 1.0 11.45081329711954 -10.310289566567041 0.9614013441809156 1.012999068576674 1.213134521580918 0.13524013020964176 0.12986267740466434 0.5203355146924874 0.9376305948302498 0.060388250968953734 0.024199521742866038 4.89452367370557e-11 10.310289566567041 0.20013545300424385 SEEDNEIES(ph)EEEVQPK ddPTM_A549_PD325901_60min_R1 4 SEEDNEIESEEEVQPK 16 0 P52701;P52701-2;P52701-3;A0A087WWJ1;A0A494C0M1;C9J7Y7 P52701 MSH6 DNA mismatch repair protein Msh6 1 SEEDNEIES(1)EEEVQPK;SEEDNEIES(1)EEEVQPK;SEEDNEIES(1)EEEVQPK;SEEDNEIES(1)EEEVQPK 213.49 2.7176999999999998e-46 31952200.0 3150.86 3469.75 3915.66 3592.48 4161.17 3114.5499999999997 3632.5599999999995 3866.61 3655.8100000000004 3769.75 3938.1800000000003 True False 3470.7329876594654 3762.158009588684 4181.400234376394 3814.3793304859514 3868.903774457183 3089.1861374257605 3770.7990586131036 3789.4874302531375 3502.1690191217313 3531.727341650439 3453.808826179892 1.0049001442556078 1.0892780112991498 1.2106634862593884 1.104397933543088 1.1201846915008349 0.894428815518019 1.0917799010849771 1.0971908466759364 1.0140019889274903 1.0225601703487246 1.0 11.753972514270322 SEEEQSSS(ph)SVKKDETNVK ddPTM_A549_MK2206_60min_R1 1 SEEEQSSSSVKKDETNVK 18 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 S(0.008)EEEQS(0.1)S(0.1)S(0.395)S(0.395)VKKDET(0.002)NVK 49.577 0.0038828000000000005 39651000.0 2691.3 2684.5 2903.8 2750.8 3026.3 2871.3 2563.4 3043.7 3927.6 3606.1 3687.3 True False 3145.525644032332 2821.129583573423 3315.6025041133585 3424.746123488104 2581.1352789153707 3175.1390601853154 3029.136598812951 3475.153795940318 3038.004871088395 2791.4795054547817 2771.6416456971 1.1348962261826585 1.0178550996854705 1.1962594476312416 1.235638138431399 0.9312658737548248 1.1455806579882484 1.0929034074500954 1.253825075595686 1.0961030535115592 1.0071574403525358 1.0 11.436525023595996 -10.058112309329823 0.9686297807455371 1.0102575874405706 1.121399076121021 0.20831372983381868 0.08837345659239809 0.5678358893628112 1.0716815186622415 0.033223775915457686 0.016512424764965176 8.747575321128154e-11 10.058112309329823 0.11114148868045048 SEEEQSSSS(ph)VKKDETNVK ddPTM_A549_MK2206_60min_R1 1 SEEEQSSSSVKKDETNVK 18 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SEEEQS(0.003)S(0.002)S(0.111)S(0.885)VKKDETNVK 148.04 1.2354e-17 41501000.0 2934.4 3157.7 3522.3 2542.7 4279.7 3389.1 3556.2 3695.8 4998.2 4761.3 4672.9 True False 3429.6549808079635 3318.4134423728083 4021.8151044281603 3165.6616141461395 3650.1617992843076 3747.7323124974914 4202.315507801596 4219.690967912811 3866.1156804852867 3685.7190231335385 3512.4899645209175 0.976417019109049 0.9447467397463212 1.1450040128375745 0.9012585505217 1.039194940385308 1.066973101803199 1.1963921748527377 1.2013389391956175 1.1006766480577266 1.0493180223608833 1.0 11.778278388100537 -6.99622851495077 24.77660319162636 1.0742038332988328 0.9957802023606905 0.2560560331986539 0.08099010448907988 158.04234659753968 1038229.6369028694 0.01301843339161851 0.024524831420502047 1.0087219820055855e-07 6.99622851495077 -0.07842363093814231 SEEEQSSSS(ph)VKKDETNVK ddPTM_A549_PD325901_60min_R1 2 SEEEQSSSSVKKDETNVK 18 2 G3V4C1;G3V2Q1;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SEEEQS(0.001)S(0.008)S(0.078)S(0.913)VKKDETNVK;SEEEQSSS(0.162)S(0.838)VKKDETNVK 223.89 1.1611999999999998e-64 133730000.0 24050.0 22508.0 25615.0 23142.0 26866.0 23112.0 26972.0 25753.0 26711.0 25766.0 27322.0 True False 26491.538295325765 24404.828151832862 27353.387935508028 24571.428780704668 24979.02484266846 22923.783534759164 27998.434219644707 25239.336212162332 25588.42956000462 24139.13036274693 23961.56720842801 1.1055845414822403 1.0184988293774435 1.1415525410995242 1.025451656269885 1.0424620654145935 0.9566896578741384 1.1684725784462382 1.053325769246216 1.0678946555300604 1.0074103314184086 1.0 14.548434650359159 -10.647837550481427 0.8435985773253138 0.998594465362286 1.063227052962426 0.14772755595848552 0.055936953925666354 0.966840191390936 1.1852984177243562 0.03971299762410906 0.009789085594873431 2.2498960307063748e-11 10.647837550481427 0.0646325876001399 SEEET(ph)SPLVTHQNPAGPVASAPELESK ddPTM_A549_MK2206_60min_R1 1 SEEETSPLVTHQNPAGPVASAPELESK 27 0 P43007-2;P43007 P43007-2 SLC1A4 Neutral amino acid transporter A 1 S(0.002)EEET(0.543)S(0.455)PLVTHQNPAGPVASAPELESK 158.2 6.0209e-41 15047000.0 987.29 1204.2 607.57 800.02 1281.8 811.46 980.59 616.04 1503.8 1186.7 1556.4 True False 1153.9204150769813 1265.4886364459371 693.7325619616211 996.0249359142624 1093.2489179901922 897.3281585964465 1158.7505100374476 703.365556543376 1163.1917010751417 918.6236458010562 1169.9029255452417 0.9863386011614497 1.081703967751125 0.592983013217359 0.8513740022062581 0.9344783179174252 0.7670107826922822 0.9904672300032104 0.6012170250925455 0.9942634347486804 0.7852135640851783 1.0 10.19217310964624 -8.934629789052492 24.999919805676395 0.9974754788831388 0.850944155346214 0.0 0.15927120501403325 70.81688739522124 27082.475404955254 0.023957375150866975 0.025504415519852715 1.1624391037700923e-09 8.934629789052492 -0.14653132353692477 SEEETS(ph)PLVTHQNPAGPVASAPELESK ddPTM_A549_MK2206_60min_R1 1 SEEETSPLVTHQNPAGPVASAPELESK 27 0 P43007-2;P43007 P43007-2 SLC1A4 Neutral amino acid transporter A 1 SEEET(0.107)S(0.893)PLVTHQNPAGPVASAPELESK 169.65 9.0857e-49 19167000.0 749.49 833.03 1067.3 591.68 1506.1 829.09 778.16 1053.4 1573.6 1490.8 1996.9 True False 875.9855887287895 875.4276688411882 1218.6591888698215 736.6416265615242 1284.5546851186052 916.8237534945989 919.5415993338084 1202.7226759022012 1217.1821125228387 1154.0272445944338 1501.0146183637185 0.5835956412494612 0.5832239460768921 0.8118902867170624 0.4907624599716089 0.8557909226220063 0.6108026812517283 0.6126133537168454 0.8012731263159246 0.8109062347771866 0.7688314493915179 1.0 10.551722312079146 -9.427729417264185 0.3654198825570644 1.0327400745845772 0.6202192588390523 0.3033573084702983 0.1222150476218332 0.5847617414589918 0.18997649634675715 0.09252578596601084 0.04679579366038097 3.7348277994854685e-10 9.427729417264185 -0.4125208157455249 SEEETS(ph)PLVTHQNPAGPVASAPELESK ddPTM_A549_PD325901_60min_R1 2 SEEETSPLVTHQNPAGPVASAPELESK 27 0 P43007-2;P43007 P43007-2 SLC1A4 Neutral amino acid transporter A 1 S(0.001)EEET(0.143)S(0.856)PLVTHQNPAGPVASAPELESK;S(0.001)EEET(0.12)S(0.88)PLVTHQNPAGPVASAPELESK 211.37 1.3349999999999998e-81 47384000.0 4531.3 4009.5 3887.3999999999996 4336.299999999999 5147.9 5159.8 4435.1 4257.799999999999 4590.1 5648.1 5659.700000000001 True False 4991.314240233248 4347.394636341474 4151.222340835207 4604.143402548166 4786.329263290887 5117.780299526236 4603.880157479846 4172.874838820517 4397.194059502722 5291.478002089226 4963.592779794302 1.0055849586516834 0.8758564268283177 0.8363341887622053 0.9275828229283078 0.9642872563549096 1.031063692484927 0.927529787741902 0.8406964519344486 0.8858893657438488 1.0660580423981743 1.0 12.277169044233883 -10.918389487417238 1.2189824636364248 0.9992460930649902 0.9173966133380862 0.28523117161817957 0.06274855428763973 0.6243579463374679 1.6724920759823656 0.04167839128844996 0.01025371903691213 1.2067311195136334e-11 10.918389487417238 -0.08184947972690404 SEEEVES(ph)DDEYLALPAR ddPTM_A549_PD325901_60min_R1 2 SEEEVESDDEYLALPAR 17 0 Q5HYA6;Q76N32-2;Q76N32 Q5HYA6 DKFZp686H16130;CEP68 Centrosomal protein of 68 kDa 1 SEEEVES(1)DDEYLALPAR;SEEEVES(1)DDEYLALPAR 218.4 1.6052999999999999e-55 4284100.0 1311.28 1843.93 1615.98 1735.73 1585.94 1592.7199999999998 1697.73 2289.2 1485.79 2044.58 1712.9099999999999 True False 1444.4001802866844 1999.3244523728972 1725.6501204771516 1842.9420999711576 1474.5490455959814 1579.7494163846336 1762.338044183502 2243.54011015734 1423.3474132739054 1915.4848698697947 1502.232929031124 0.961502142825654 1.3309017621271129 1.148723401763082 1.2268018257060684 0.98157151071572 1.0516008442202798 1.173145662117881 1.4934701981298784 0.9474878267992058 1.2750917869342675 1.0 10.552892812230603 SEEHS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 SEEHSPPR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.014)EEHS(0.986)PPR 62.823 0.0031298000000000003 2253000.0 128.86 229.37 122.62 122.49 102.19 197.7 122.03 0.0 182.89 206.07 221.84 True False 150.6084176754751 241.04395328151844 140.0093598231215 152.5000554987851 87.15798637027443 218.62048277736108 144.20127141809485 0.0 141.4657070153164 159.51864387816937 166.75100552747128 0.90319346020773 1.4455322324386692 0.8396312776660034 0.9145375466636186 0.522683423074865 1.311059457097814 0.8647700261953654 0.0 0.8483649412957257 0.95662777788701 1.0 7.381551650825499 -7.974390897303797 24.975562386954813 0.836555591794863 0.9878385557473951 0.08809711991237246 0.34455820209939125 684.2760243137976 667346.3511150301 0.05564222063029434 0.07687946396600925 1.060740382237071e-08 7.974390897303797 0.15128296395253205 SEEHS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 SEEHSPPR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.002)EEHS(0.998)PPR;S(0.049)EEHS(0.951)PPR 62.823 0.0031298000000000003 5611400.0 517.25 354.05 528.6899999999999 480.65 740.64 512.88 398.33000000000004 534.29 574.7 615.46 577.23 True False 569.7608392206752 383.8870360385831 564.5700826712367 510.3386588646485 688.620001469291 508.70327532482185 413.4886661245398 523.6331668076036 550.5473575730848 576.5997505649392 506.2343693624511 1.1254882593969844 0.7583187931748855 1.1152345965412291 1.0081074888442805 1.3602790390082273 1.004877001862754 0.8167929543094541 1.0343690561094547 1.0875345312220528 1.1389976371835557 1.0 8.98366164828126 -5.854328554555361 22.54139251841465 1.0469832553308946 0.9404266873140632 0.08312303116982411 0.14739574672883327 14.145478291508054 3418.7705065004066 0.018942678541736008 0.05889534201647551 1.3985289004351503e-06 5.854328554555361 -0.10655656801683144 SEEIS(ph)ES(ph)ESEETNAPK ddPTM_A549_MK2206_60min_R1 2 SEEISESESEETNAPK 16 0 P54259 P54259 ATN1 Atrophin-1 2 S(0.009)EEIS(0.988)ES(0.98)ES(0.021)EET(0.002)NAPK;S(0.007)EEIS(0.817)ES(0.817)ES(0.265)EET(0.094)NAPK 80.53399999999999 0.00032639 3882000.0 977.1500000000001 777.51 937.5799999999999 1140.3899999999999 1662.08 906.14 944.5 1333.73 1613.67 1463.5700000000002 1497.38 True False 1142.0690309761799 817.0819379862818 1070.5429422848008 1419.7856011940514 1417.5902337440625 1002.0271333529487 1116.1034241939733 1522.7903118768202 1248.176321501479 1132.9485205064902 1125.539220414375 1.0146861257804232 0.7259471044336131 0.9511378394176909 1.2614270346539747 1.259476531810386 0.8902640753682892 0.9916166437834767 1.3529429132786635 1.1089585319309923 1.006582889301172 1.0 10.13640061432085 -6.0072706994292515 24.57523075894309 1.0850913864138652 0.8623730470921221 0.2924385545578788 0.1463896324699833 260.377780862811 880101.4545475929 0.020059649288344916 0.058969468824718055 9.833979544149352e-07 6.0072706994292515 -0.222718339321743 SEEIS(ph)ES(ph)ESEETNAPK ddPTM_A549_PD325901_60min_R1 2 SEEISESESEETNAPK 16 0 P54259 P54259 ATN1 Atrophin-1 2 S(0.001)EEIS(0.987)ES(0.972)ES(0.039)EET(0.001)NAPK;SEEIS(0.997)ES(0.894)ES(0.098)EET(0.011)NAPK 90.444 1.211e-05 10001700.0 2099.55 2346.29 2283.9 2961.4 3303.3999999999996 2748.4 2853.0 3498.1 2542.8 2674.8999999999996 3336.5 True False 2312.6947703929814 2544.0200926054727 2438.8991882063933 3144.3189521726226 3071.3805801113303 2726.0179416291157 2961.572476221504 3428.3276512936372 2435.9349588251957 2506.0063574987093 2926.131651816119 0.7903590971231917 0.8694140918186348 0.8334892200399383 1.0745651003846954 1.0496385486295745 0.9316115151337085 1.0121118352222425 1.1716245402580665 0.8324762002124272 0.8564229691932499 1.0 11.514778964989292 -6.211015639661907 23.361763208066847 0.9619323749768576 0.834919841216209 0.32820236039050266 0.09549130675477434 209.31089567011023 96974.54340548962 0.014735101748805412 0.038985301064075266 6.151547195730719e-07 6.211015639661907 -0.12701253376064858 SEEIS(ph)ESESEETNAPK ddPTM_A549_MK2206_60min_R1 2 SEEISESESEETNAPK 16 0 P54259 P54259 ATN1 Atrophin-1 1 SEEIS(0.939)ES(0.061)ESEETNAPK;SEEIS(0.458)ES(0.367)ES(0.176)EETNAPK 250.78 2.4417999999999998e-77 30193000.0 7220.2 7891.700000000001 8328.0 6750.8 9921.2 8425.9 7503.200000000001 7917.5 11230.7 11742.3 10303.2 True False 8438.793243058088 8293.353821823954 9509.035627197483 8404.746303054933 8461.804622534171 9317.523145340241 8866.434317006057 9039.829871326825 8686.964381742653 9089.706274618467 7744.63108614606 1.0896314038965362 1.0708520172974376 1.2278229293849348 1.0852352048233411 1.0926026725367233 1.2030945104677537 1.1448491501250109 1.1672382804001697 1.121675685402534 1.1736784068228296 1.0 12.918980802842363 -10.344452258165923 0.7677043625937896 1.001128630440381 1.135355446271673 0.0 0.06931715250329258 0.39823528228292626 0.4349681978250819 0.02968511954501042 0.009475290217507946 4.5242619464557114e-11 10.344452258165923 0.13422681583129203 SEEIS(ph)ESESEETNAPK ddPTM_A549_PD325901_60min_R1 2 SEEISESESEETNAPK 16 0 P54259 P54259 ATN1 Atrophin-1 1 SEEIS(0.509)ES(0.486)ES(0.005)EETNAPK;SEEIS(0.499)ES(0.499)ES(0.002)EETNAPK 255.91 2.5177999999999997e-85 23662000.0 4854.8 4326.3 4361.4 4048.8 6192.4 5193.0 6002.0 5553.0 4961.5 5787.5 5833.5 True False 5347.655722085134 4690.892484151172 4657.390831228759 4298.885180508039 5757.467186620267 5150.70992973366 6230.409394420424 5442.241058755771 4752.985409081013 5422.076262299071 5116.016481603276 1.0452772662705079 0.9169033174578677 0.9103549310242272 0.840279775478917 1.1253808910357481 1.0067813401804193 1.2178243398598114 1.0637653491394268 0.9290402847942948 1.0598238457198794 1.0 12.320805196631639 -4.875868535197874 16.71164478733216 0.9862599633131618 8.052170924613371 0.0 0.10451688140136524 3319294.5440736962 239677.97190234027 0.014345937573109386 894496346.8135263 1.3308572193256798e-05 4.875868535197874 7.065910961300209 SEEISES(ph)ESEETNAPK ddPTM_A549_MK2206_60min_R1 2 SEEISESESEETNAPK 16 0 P54259 P54259 ATN1 Atrophin-1 1 SEEIS(0.001)ES(0.988)ES(0.011)EETNAPK;SEEIS(0.001)ES(0.997)ES(0.002)EETNAPK 140.1 2.0694000000000004e-11 4170000.0 1110.03 1500.46 1593.3600000000001 1471.08 2155.11 1432.84 1287.6 1625.59 2733.1 1863.83 2279.4 True False 1297.3759263720908 1576.8270050171648 1819.3224071747584 1831.4946660392895 1838.0961738569538 1584.4621777577845 1521.5402530356391 1856.0223606605837 2114.05721386386 1442.7895085138468 1713.3620717603583 0.7572106023329493 0.920311608974212 1.061843516417714 1.0689478284981284 1.0728007839980023 0.9247678607300217 0.8880436179332277 1.0832633634487145 1.233864837273896 0.8420809193187536 1.0 10.74261434205956 -8.42022740271802 6.667077865724566 1.1128205523181993 0.966998290245277 0.0 0.12987176433204495 0.27594766984710073 15.53716498326237 0.02013021272521988 0.02432756776686646 3.7999037589819846e-09 8.42022740271802 -0.14582226207292237 SEEISES(ph)ESEETNAPK ddPTM_A549_PD325901_60min_R1 2 SEEISESESEETNAPK 16 0 P54259 P54259 ATN1 Atrophin-1 1 SEEIS(0.098)ES(0.891)ES(0.011)EETNAPK;SEEISES(0.988)ES(0.011)EETNAPK 144.68 2.4281e-14 5702800.0 1503.87 1523.6599999999999 1583.02 1738.95 2159.54 1998.92 2149.94 1879.17 2467.93 2302.2 2030.24 True False 1656.541775309419 1652.0641754852356 1690.4532566725713 1846.3609920580068 2007.8613604085556 1982.6414582598143 2231.7571431923084 1841.6884801696544 2364.2114845577553 2156.838699104091 1780.5333507517328 0.9303626773461081 0.9278479253352608 0.9494083646110139 1.0369707432205535 1.127674109311598 1.1135098690640939 1.2534205788676023 1.0343465228506403 1.3278108402516562 1.2113441729094734 1.0 10.798093743397894 -6.534844378777005 1.5620172097502927 1.1540876114426972 0.9255972461654133 0.5516521082291457 0.08682753789916138 0.31692844338544135 1.5143596509002535 0.01797858270715807 0.053711002585325594 2.9184726061791643e-07 6.534844378777005 -0.22849036527728395 SEEKDEDS(ph)ERGDEDRER ddPTM_A549_MK2206_60min_R1 2 SEEKDEDSERGDEDRER 17 3 Q8WVS4 Q8WVS4 WDR60 WD repeat-containing protein 60 1 S(0.027)EEKDEDS(0.973)ERGDEDRER;SEEKDEDS(1)ERGDEDRER 72.443 0.00013605 10131600.0 628.99 820.5 515.45 556.28 830.16 887.3 877.69 917.28 1026.1599999999999 1395.01 1594.13 True False 735.1481346709379 862.2599453611457 588.548560763562 692.5686249723583 708.0445637063025 981.1934970579283 1037.1549119966216 1047.3072490521852 793.7363984407953 1079.8762721234777 1198.263525250216 0.6135112345320096 0.7195912478276366 0.4911678844940757 0.57797688937226 0.5908921942345293 0.8188461689619068 0.865548262248947 0.8740208034234299 0.6624055407803979 0.9012009874021517 1.0 10.226729508951355 -7.285848258251034 5.310468135857007 0.8410047583049699 0.5976109711445352 0.6634526985887619 0.09026508626827413 0.1316130586039064 11.344025227124604 0.019143821861230738 0.03154318500377174 5.1778771449028987e-08 7.285848258251034 -0.2433937871604347 SEEKDEDS(ph)ERGDEDRER ddPTM_A549_PD325901_60min_R1 4 SEEKDEDSERGDEDRER 17 3 Q8WVS4 Q8WVS4 WDR60 WD repeat-containing protein 60 1 S(0.002)EEKDEDS(0.998)ERGDEDRER;S(0.04)EEKDEDS(0.96)ERGDEDRER;S(0.013)EEKDEDS(0.987)ERGDEDRER;S(0.05)EEKDEDS(0.95)ERGDEDRER 80.67 5.8343e-05 43115300.0 3411.55 3040.66 3062.95 4104.98 3422.42 3714.6900000000005 3576.4700000000003 4145.0 3814.4399999999996 3659.56 4080.78 True False 3757.888044549627 3296.9070893971984 3270.820206014612 4358.535291514004 3182.041025908039 3684.4387962415426 3712.5745229694808 4062.3247233104034 3654.132351872414 3428.4947570555832 3578.869930195768 1.0500208495546153 0.9212145603785198 0.913925420540694 1.2178523881910364 0.8891189364163279 1.02949782140867 1.0373594445681347 1.1350858797732808 1.021029661078666 0.9579824983659132 1.0 11.805288396320416 SEEKIS(ph)DSEGFK ddPTM_A549_MK2206_60min_R1 1 SEEKISDSEGFK 12 1 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 SEEKIS(0.922)DS(0.078)EGFK 139.6 1.9073e-09 22768000.0 9798.0 10967.0 8964.4 9363.1 13665.0 11593.0 10225.0 12019.0 17095.0 15545.0 15366.0 True False 11451.662861899002 11525.17345615562 10235.686716672568 11657.059920325535 11654.896601916038 12819.763565189409 12082.750145456193 13722.730056643783 13223.009795105434 12033.373703528625 11550.198119974411 0.9914689551597382 0.997833399604158 0.886191441077657 1.0092519452256252 1.0090646481431833 1.1099172007291775 1.046107609579511 1.1880947767391357 1.1448296953658426 1.0418326662915531 1.0 13.49562997787937 -6.936437908495939 2.1529091958580664 1.080616528581072 0.9639509788627737 0.48310187082511336 0.056991893823844876 0.26444136311805305 2.4723480491664622 0.010496823213379917 0.021895727060134578 1.1576095248201855e-07 6.936437908495939 -0.11666554971829834 SEEKIS(ph)DSEGFK ddPTM_A549_PD325901_60min_R1 4 SEEKISDSEGFK 12 1 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 SEEKIS(0.716)DS(0.284)EGFK;SEEKIS(0.888)DS(0.112)EGFK;SEEKIS(0.998)DS(0.002)EGFK;S(0.03)EEKIS(0.947)DS(0.023)EGFK 96.993 7.1096e-05 90393000.0 31222.0 30691.4 33219.9 29893.8 37988.4 34516.2 33665.2 33026.8 35219.6 34390.9 39107.700000000004 True False 34391.63445557839 33277.87198947767 35474.40218148675 31740.272132254322 35320.225836865415 34235.111511009614 34946.34760830431 32368.054564976603 33739.44269145815 32219.452704812298 34297.70082413587 1.0027387734216986 0.9702653877620704 1.0343084617649594 0.9254343985039999 1.02981322328201 0.998175116359922 1.0189122526753158 0.9437383202724381 0.9837231616328967 0.939405614096993 1.0 15.065824246886484 SEEKISDS(ph)EGFK ddPTM_A549_MK2206_60min_R1 1 SEEKISDSEGFK 12 1 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 SEEKIS(0.087)DS(0.913)EGFK 115.5 7.3058e-06 25521000.0 8125.0 7754.5 8184.2 6440.5 10433.0 8878.3 9314.7 9290.4 11342.0 11996.0 11713.0 True False 9496.30136282194 8149.17092785253 9344.842624893088 8018.42278912503 8898.319520511532 9817.795813061432 11007.060418570263 10607.342650656748 8773.055109452236 9286.09526841617 8804.33883764547 1.0785933547011828 0.925585791065698 1.0613906162875673 0.910735370024603 1.0106743600625887 1.1151088110197027 1.2501859164604647 1.2047858273357246 0.9964467827999224 1.0547180702213337 1.0 13.103998953515376 -4.934941616251806 15.010174168890757 1.0292196523272956 1.5460547630871548 0.0 0.10258563598800403 6283210.698017456 33831139.46318246 0.014956626483185003 99151952.74086103 1.1616047619941676e-05 4.934941616251806 0.5168351107598592 SEEKT(ph)PIK ddPTM_A549_PD325901_60min_R1 2 SEEKTPIK 8 1 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 SEEKT(1)PIK;SEEKT(1)PIK 71.153 0.002479 58986000.0 22045.5 22201.0 22698.0 23295.0 26090.0 22938.0 22487.7 22618.0 22459.2 22982.1 25010.0 True False 24283.542930960662 24071.956184416264 24238.422774162053 24733.879243216452 24257.5284056138 22751.200533069667 23343.48172924161 22166.866246522248 21515.31792797185 21531.006283850285 21933.92855145246 1.107122368617026 1.0974758182488118 1.1050652744356182 1.1276538621522307 1.1059363282191175 1.037260629335053 1.0642635984922915 1.0106199714530557 0.9809149271869544 0.9816301823607658 1.0 14.420876613544607 -7.820973181900904 1.0446874148497467 0.9907029778709542 1.1097550251614374 0.9016579239574474 0.016688500958249305 0.10174442563099209 0.22382845951512478 0.003178263286351037 0.005208757545745454 1.5101734059352624e-08 7.820973181900904 0.11905204729048324 SEEKT(ph)PIKKPGDGR ddPTM_A549_MK2206_60min_R1 2 SEEKTPIKKPGDGR 14 3 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 S(0.035)EEKT(0.965)PIKKPGDGR;S(0.122)EEKT(0.878)PIKKPGDGR 51.798 0.0055267 40086000.0 7467.299999999999 8149.9 7096.8 6968.6 9244.2 8098.1 6397.6 8522.5 10506.1 10415.5 10903.0 True False 8727.597682043113 8564.695098962584 8103.23295378183 8675.907312832338 7884.390425717696 8955.03556691628 7559.961108124261 9730.590474061624 8126.485124794225 8062.631316121088 8195.484192508206 1.0649276451562597 1.0450505299969814 0.9887436499711992 1.0586204681796965 0.962040831330638 1.0926792556201144 0.922454479875039 1.1873112369561662 0.9915808430480465 0.983789502454466 1.0 13.000613471509084 SEEPAGQILSHLS(ph)SELK ddPTM_A549_MK2206_60min_R1 1 SEEPAGQILSHLSSELK 17 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SEEPAGQILS(0.006)HLS(0.843)S(0.151)ELK 57.00899999999999 0.0026081 627460.0 385.35 647.11 470.0 281.26 748.99 596.49 307.04 489.74 623.77 403.84 695.67 True False 450.3876590970383 680.0451349697146 536.6530673370337 350.16871262624124 638.8145631810536 659.6101758819837 362.8251936098652 559.1621447658482 482.4870909560057 312.61226352093905 522.9159394847456 0.861300306777466 1.3004865287522043 1.026270241189863 0.6696462780830116 1.221639110505043 1.261407668184545 0.6938499407139403 1.0693155487224537 0.9226857598401448 0.5978250803159127 1.0 9.030435236752584 -7.740678134058938 24.999980222382295 0.9537989013393787 1.056376815900069 0.10511695491838524 0.21913014901130726 564.1293046480642 679303.879149317 0.02807598498833203 0.04161791080626435 1.8168616832131377e-08 7.740678134058938 0.10257791456069032 SEEPAGQILSHLS(ph)SELK ddPTM_A549_PD325901_60min_R1 1 SEEPAGQILSHLSSELK 17 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SEEPAGQILS(0.023)HLS(0.808)S(0.169)ELK 70.99 0.00034561 1446000.0 368.26 376.44 294.87 303.77 434.08 326.16 456.11 429.67 313.18 345.02 612.97 True False 405.6454841013164 408.163919916295 314.88165139735526 322.53318298827475 403.5917182947041 323.5038610980035 473.4675156429687 421.0998947804059 300.0181337127869 323.2353783185183 537.5785759369778 0.7545789625159312 0.7592637396400735 0.5857407000428342 0.5999740269152513 0.7507585613717213 0.6017796757137304 0.8807410429586668 0.7833271518427716 0.558091685833773 0.6012802458787203 1.0 9.070331833461777 -10.959164369205466 1.1757358930679158 1.0030873494559287 0.6863190716674903 0.0 0.15088357231857763 0.2920621107075331 0.7061411309923373 0.07610643165497251 0.01696406482519747 1.0985899729083663e-11 10.959164369205466 -0.3167682777884384 SEEPAGQILSHLSS(ph)ELK ddPTM_A549_PD325901_60min_R1 1 SEEPAGQILSHLSSELK 17 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SEEPAGQILSHLS(0.435)S(0.564)ELK 73.21 0.00018331 1239000.0 850.94 618.3 779.21 792.98 679.83 774.36 522.83 779.31 785.27 982.61 753.82 True False 937.3268023710807 670.4063109240387 832.0918763703775 841.9605736117527 632.0810860861797 768.0538688982398 542.726581753554 763.7660506931317 752.2678327499842 920.5678369067281 661.1049188586928 1.417818527185136 1.0140694643165014 1.2586381565680531 1.2735657375916707 0.9560979930044707 1.1617730363044034 0.8209386532632327 1.1552872001189602 1.137894774778974 1.3924685940863404 1.0 9.368735438671743 -2.0000000000000075 0.4533813302438037 1.0578016940066641 7.4761225719230024 0.12292559584786655 0.16571537236862158 72.773910368628 0.7701112421113375 0.025264737734658947 437.35246299524096 0.009999999999999827 2.0000000000000075 6.418320877916338 SEES(ph)PVYSNSSVR ddPTM_A549_MK2206_60min_R1 2 SEESPVYSNSSVR 13 0 Q03188;H0Y8J2 Q03188 CENPC Centromere protein C 1 SEES(1)PVYSNSSVR;SEES(1)PVYSNSSVR 194.98 2.7144999999999996e-30 68616000.0 4900.6 4584.7 4246.4 4497.9 6116.5 4199.8 4041.4 4269.0 5851.0 7429.2 6413.9 True False 5727.701471833255 4818.041647163001 4848.6033726382575 5599.885701918406 5216.770952478556 4644.220048398385 4775.670067271071 4874.14382326419 4525.757842127047 5750.938560196517 4821.151615365343 1.1880359567159586 0.9993549325035889 1.0056940248851383 1.1615244963612394 1.082059094730053 0.9633009743142977 0.9905662481243447 1.0109916078411552 0.938729623790122 1.1928557778328064 1.0 12.235162084920267 -7.257542520289739 24.07677016495733 0.9748597400052589 1.0820321728914555 0.04143072042814955 0.08600442596963447 139.55172009257927 862219.6817432742 0.008197969252523203 0.01386202570104913 5.526592963109975e-08 7.257542520289739 0.1071724328861966 SEES(ph)PVYSNSSVR ddPTM_A549_PD325901_60min_R1 2 SEESPVYSNSSVR 13 0 Q03188;H0Y8J2 Q03188 CENPC Centromere protein C 1 S(0.011)EES(0.988)PVYSNS(0.001)SVR;SEES(0.923)PVYS(0.073)NS(0.004)SVR 201.3 1.3721e-30 87260000.0 6122.6 5303.5 5130.6 5602.5 6708.1 5799.1 5354.6 6030.1 6432.9 6248.7 6383.9 True False 6744.1618447801075 5750.444557634871 5478.793368804117 5948.553700799322 6236.94619768869 5751.8740522854805 5558.372233149548 5909.824924978064 6162.547584012344 5854.156015590186 5598.720770876344 1.2045897841275037 1.0270997238418764 0.9785794993213323 1.062484439613912 1.1139948664938413 1.0273550490686756 0.992793257714033 1.0555670066133738 1.1007063642232233 1.0456238585861568 1.0 12.450881513915094 -5.257736699768483 24.806976256580892 1.0440173460835773 1.2045898527169367 0.5752610985343813 0.040446252237749794 215.39136013385553 1442995.4267733314 0.006496296559201615 0.0668940288021151 5.5241224940839035e-06 5.257736699768483 0.16057250663335942 SEES(ph)SDDESHPLR ddPTM_A549_PD325901_60min_R1 2 SEESSDDESHPLR 13 0 Q9UQ84;Q9UQ84-4;H0YAZ2 Q9UQ84 EXO1 Exonuclease 1 1 S(0.013)EES(0.521)S(0.409)DDES(0.057)HPLR;S(0.059)EES(0.47)S(0.47)DDES(0.001)HPLR 53.995 0.0063944 4355600.0 379.56 492.22 288.13 324.01 415.02 407.0 364.46000000000004 323.687 319.86 453.83 652.21 True False 418.0926517826962 533.7011068462399 307.68423446644266 344.02336181989983 385.8704269412736 403.68552694042006 378.3297247401647 317.23080885746066 306.41739654311283 425.1750963488875 571.9923046998324 0.7309410429955014 0.9330564457966147 0.5379167375825237 0.6014475352084236 0.6746077242136482 0.7057534229455489 0.661424501049368 0.5546067774879168 0.5357019561721432 0.7433231056701174 1.0 9.159851927606939 -10.889222529766748 1.1381736159700546 1.0000852120776547 0.6517347403083963 0.20574780853663444 0.1298150561434599 0.29577614163438476 0.6801645620370661 0.08094499090370029 0.01939734971485092 1.2905578304360021e-11 10.889222529766748 -0.3483504717692584 SEESIT(ph)VSDKENETCLADQETGSK ddPTM_A549_MK2206_60min_R1 1 SEESITVSDKENETCLADQETGSK 24 1 Q6N043-2;Q6N043;Q6N043-5 Q6N043-2 ZNF280D Zinc finger protein 280D 1 SEES(0.001)IT(0.5)VS(0.5)DKENETCLADQETGSK 216.12 1.2347e-74 5754000.0 1236.2 1524.5 1512.0 1443.2 1933.8 2070.8 1954.9 1512.0 2527.2 2086.7 1937.7 True False 1444.8403378117514 1602.0905383340228 1726.4243357736061 1796.7840647877097 1649.34058168937 2289.93068151421 2310.0800253645302 1726.3306303057982 1954.793235109124 1615.31302072391 1456.5156122006001 0.9919841062525866 1.0999473846445618 1.1853112464515296 1.233618129278415 1.1323878493807815 1.5721978277008863 1.586031763761398 1.1852469110835988 1.3421024936050587 1.10902554507012 1.0 10.50830545028293 -5.501529127178649 1.5054305749723564 1.228226859879406 0.9562056021940225 0.17922442696053298 0.17496999517646608 1.3103482275200624 3.7538642963108146 0.030061638292037007 0.4602155366638859 3.1511630315220898e-06 5.501529127178649 -0.27202125768538343 SEESITVS(ph)DKENETCLADQETGSK ddPTM_A549_MK2206_60min_R1 1 SEESITVSDKENETCLADQETGSK 24 1 Q6N043-2;Q6N043;Q6N043-5 Q6N043-2 ZNF280D Zinc finger protein 280D 1 SEESIT(0.097)VS(0.902)DKENETCLADQETGSK 188.17 5.3234999999999994e-51 5658000.0 1768.0 2511.2 1673.7 1607.6 2373.2 2553.4 1873.7 2347.3 2981.6 3219.7 2836.0 True False 2066.3951765500547 2639.009353797571 1911.0558272382848 2001.4620721679073 2024.105423759029 2823.5990931902575 2214.1270364343545 2680.036963304762 2306.2723606368168 2492.367533821236 2131.742930381846 0.9693453873351954 1.2379585343927288 0.8964757429245792 0.9388852866088304 0.9495072763752352 1.3245495284389117 1.0386463606274288 1.2572045742986018 1.081871705902038 1.1691688985101003 1.0 11.057817756800262 -4.97002863812834 18.839581271698556 1.060847674231161 0.6335499150930158 0.022974586654198936 0.13821045619671576 4020.474029884378 57670.21449802909 0.017414330265100947 59901.745545895195 1.0714486497332687e-05 4.97002863812834 -0.42729775913814516 SEET(ph)QERER ddPTM_A549_PD325901_60min_R1 2 SEETQERER 9 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.005)EET(0.995)QERER;S(0.009)EET(0.991)QERER 44.543 0.022289 4711000.0 832.0899999999999 586.55 711.68 1003.47 776.51 534.52 572.8299999999999 817.94 763.3 851.83 1053.46 True False 916.5631642477174 635.9806269974039 759.9788844794987 1065.4520628542787 721.9706164140728 530.1670463395415 594.6293591146037 801.625545038483 731.2211554472512 798.0453084257832 923.8910984331513 0.9920684004880428 0.6883718525657173 0.8225849191191091 1.153222565582896 0.7814455812362299 0.5738414919666011 0.6436141230530846 0.8676623753578518 0.7914581671880446 0.86378720368581 1.0 9.851578997033299 -10.640519299751096 0.8765536158108338 1.0018354693399176 0.8077647200392185 0.055346029545991215 0.15680235530366146 0.8942699676286613 1.205384733241731 0.11164812761396266 0.02884498366738638 2.288130026375066e-11 10.640519299751096 -0.19407074930069912 SEET(ph)QERERSR ddPTM_A549_MK2206_60min_R1 1 SEETQERERSR 11 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SEET(0.994)QERERS(0.006)R 80.52199999999999 0.0002995 11593000.0 328.52 544.53 806.23 452.05 114.48 137.42 0.0 168.09 108.37 952.11 1016.6 True False 383.9661444571403 572.2442511243198 920.5655371896524 562.8022702932958 97.64014365073902 151.9616931879866 0.0 191.9172722540355 83.82436803132941 737.0276897308872 764.1501632673428 0.5024747267152088 0.7488636116722474 1.2046919328702501 0.7365074266121643 0.12777612090436602 0.1988636533665463 0.0 0.251151254661045 0.1096961985493981 0.9645063564202019 1.0 9.577712360121827 -11.00205506868405 1.3138581260220374 0.9964657208125304 0.4036150467997576 0.27732695950041475 0.3403243410332521 0.5190657195678808 1.61043136343445 0.26895255589217676 0.06284714696365792 9.952792076170285e-12 11.00205506868405 -0.5928506740127728 SEET(ph)QERERSR ddPTM_A549_PD325901_60min_R1 1 SEETQERERSR 11 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.001)EET(0.981)QERERS(0.018)R 43.382 0.023402000000000003 18897000.0 181.9 0.0 112.43 131.36 120.03 237.98 176.87 164.33 119.42 177.91 200.46 True False 200.36635409229748 0.0 120.06017589651252 139.47380885979453 111.59950688102043 236.0419697820176 183.6008846369777 161.05230923560893 114.40119269423654 166.6767322376894 175.80469082063814 1.1397099426471957 0.0 0.6829179320306188 0.7933452071656631 0.6347925437033873 1.3426374955082145 1.0443457667707712 0.916086530364084 0.6507288978480812 0.9480789816225018 1.0 7.457829754757676 -6.445620107921149 1.9330739051961494 0.8820184338603491 0.5460331828839715 0.1667592557614419 0.306106021621591 0.4627491900779869 3.365353870800135 0.04406928109308999 0.12650857382610742 3.584098132136947e-07 6.445620107921149 -0.33598525097637755 SEETLLT(ph)PER ddPTM_A549_MK2206_60min_R1 2 SEETLLTPER 10 0 Q6P4F7-3;Q6P4F7;H3BQ41 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 SEETLLT(1)PER;SEETLLT(1)PER 210.44 3.2091000000000005e-26 45645000.0 4254.6 5782.2 4848.1 4426.700000000001 6193.2 5412.7 4437.2 5538.5 6678.1 7180.5 7675.6 True False 4972.672465016887 6076.489282226952 5535.633480333352 5511.241698722115 5282.188484082433 5985.468321340529 5243.381803952883 6323.599335944888 5165.5210127343435 5558.420062926168 5769.536684216815 0.8618841922992126 1.053202295922624 0.959458927694605 0.9552312430560856 0.9155307909788363 1.0374261659024402 0.9088046564114438 1.0960324341543353 0.8953095015177178 0.9634083925892734 1.0 12.494239754274522 SEETLLT(ph)PER ddPTM_A549_PD325901_60min_R1 2 SEETLLTPER 10 0 Q6P4F7-3;Q6P4F7;H3BQ41 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 SEETLLT(1)PER;SEETLLT(1)PER 223.14 6.7908e-35 56503000.0 4310.1 4049.1000000000004 4098.4 3785.8999999999996 5083.3 4448.200000000001 4547.3 4986.3 4839.4 4328.4 4850.1 True False 4747.658179072079 4390.3318673176855 4376.542069681283 4019.7464445972605 4726.266544432986 4411.97533399601 4720.349989878039 4886.844334823325 4636.0168474668235 4055.1040853106365 4253.568447317058 1.116158876452704 1.0321526317713052 1.0289106955459457 0.9450292135613144 1.11112977326463 1.03724093984637 1.1097388106815125 1.1488810854579539 1.0899123653202278 0.9533416790009333 1.0 12.054457954420972 -5.250594153358501 23.165205378069786 1.0506031649629166 1.116158984326314 0.0913494327933837 0.06217287454646267 1092.5199886369999 2333471.5801891335 0.0081589102018805 0.15106997841309305 5.615725184146297e-06 5.250594153358501 0.06555581936339738 SEETQERERS(ph)R ddPTM_A549_PD325901_60min_R1 2 SEETQERERSR 11 2 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SEET(0.012)QERERS(0.988)R;SEET(0.002)QERERS(0.997)R 78.486 0.00021532 117323000.0 1082.4 1111.88 1133.88 1161.24 1105.51 1297.2 1202.25 1294.41 944.0799999999999 1340.47 1555.06 True False 1192.2844511792346 1205.582029743199 1210.8319153743444 1232.9671574326112 1027.8627914024562 1286.6360332852894 1248.0022816464427 1268.5919771049996 904.4036007266357 1255.8324954339594 1363.7974783375314 0.8742386388869328 0.8839890444824718 0.8878385057951185 0.9040690989805888 0.7536769995024631 0.9434216250741996 0.9150935541894072 0.9301908804314646 0.6631509553963271 0.9208350326067611 1.0 10.413413707109992 SEETQERERS(ph)RTGS(ph)ESS(ph)QTGTSTTSSR ddPTM_A549_PD325901_60min_R1 1 SEETQERERSRTGSESSQTGTSTTSSR 27 3 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 3 SEET(0.006)QERERS(0.801)RT(0.343)GS(0.843)ES(0.206)S(0.766)QT(0.033)GT(0.002)STTSSR 101.44 9.1015e-13 17564000.0 204.54 208.11 264.2 329.0 250.53 412.9 513.94 487.01 292.45 319.45 536.34 True False 225.30475022561043 225.64816006210856 282.13020076366263 349.3215827867875 232.93363708158006 409.53747929655873 533.4982679387592 477.296203498046 280.1593435222699 299.2798724823218 470.3735801393849 0.4789910822772961 0.4797211611996632 0.5998002708401682 0.7426471161141187 0.4952098649174881 0.8706642902333105 1.1342011763940243 1.014717287813252 0.5956102879741904 0.6362599540425651 1.0 8.877663219183034 -7.26832583377348 24.199202181730683 0.8526802553756078 0.5672931667434675 0.47862072797192756 0.16318621066343753 313.0637052351777 1100114.7216286622 0.029081468048906194 0.04713822824946595 5.391060010856995e-08 7.26832583377348 -0.28538708863214024 SEETQERERSRT(ph)GS(ph)ESS(ph)QTGTSTTSSR ddPTM_A549_PD325901_60min_R1 1 SEETQERERSRTGSESSQTGTSTTSSR 27 3 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 3 S(0.001)EET(0.008)QERERS(0.554)RT(0.612)GS(0.626)ES(0.378)S(0.727)QT(0.059)GT(0.021)S(0.007)T(0.003)T(0.001)SSR 63.008 0.0012806 16206000.0 155.58 258.88 131.8 406.52 219.09 442.11 259.96 284.99 338.38 320.49 342.03 True False 171.37436706805744 280.69672613943885 140.74474057778482 431.62981712609366 203.70187421946824 438.50960274110327 269.85292005557034 279.3056508796702 324.15906534814746 300.2542067048345 299.96247830680886 0.5713193464576313 0.9357727930635893 0.4692078201655199 1.438946029391757 0.6790911829016063 1.4618815167028494 0.8996222513522449 0.9311352955084925 1.0806653791431533 1.0009725496324484 1.0 8.228638238008532 -6.243137806545406 24.992065488061687 1.0474238687166673 0.6864672926139491 0.35929243326636084 0.23821837369446022 668.2303341195383 912513.4392482407 0.0283471906705096 0.07484173967116936 5.712973288113973e-07 6.243137806545406 -0.36095657610271814 SEEVPAFGVAS(ph)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK ddPTM_A549_MK2206_60min_R1 3 SEEVPAFGVASPPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK 44 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 SEEVPAFGVAS(0.999)PPPLT(0.001)DTPDTTANAEGDLPTTMGGPLPPHLALK;SEEVPAFGVAS(1)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK;SEEVPAFGVAS(0.924)PPPLT(0.031)DT(0.031)PDT(0.007)T(0.007)ANAEGDLPTTMGGPLPPHLALK 193.73 1.6124999999999997e-82 114947000.0 6410.5 6818.299999999999 7670.0 7406.200000000001 10473.5 8757.3 7255.1 7578.9 12018.400000000001 11048.3 11040.8 True False 7492.435678322472 7165.3223466860445 8757.721332925634 9220.719332476949 8932.862024161552 9683.991673374727 8573.257758464482 8653.232284407813 9296.251589441074 8552.481356622398 8299.064649421674 0.9028048334151232 0.8633891467739517 1.0552660694763862 1.1110552480296079 1.0763697358092088 1.166877483482378 1.0330390376055107 1.0426756086314883 1.1201565456040747 1.0305355745383167 1.0 13.01873303055757 -5.779831813231391 8.739758656380355 1.0675641145060097 0.8829378919896707 0.711889856388797 0.04599090868073662 0.07913071598941769 32.4495739674651 0.00749626308177684 0.024359301296589114 1.6602297307395325e-06 5.779831813231391 -0.1846262225163391 SEEVPAFGVAS(ph)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK ddPTM_A549_PD325901_60min_R1 3 SEEVPAFGVASPPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK 44 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 SEEVPAFGVAS(0.999)PPPLT(0.001)DTPDTTANAEGDLPTTMGGPLPPHLALK;SEEVPAFGVAS(1)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK;SEEVPAFGVAS(0.989)PPPLT(0.005)DT(0.005)PDTTANAEGDLPTTMGGPLPPHLALK 230.71 1.8884999999999995e-138 216750000.0 11670.100000000002 14773.099999999999 13843.7 13935.5 18498.6 15090.4 14824.0 16879.8 15312.300000000001 17070.3 18709.300000000003 True False 12854.839960926452 16018.080983198957 14783.216730930799 14796.264185183216 17199.322152705525 14967.508785606165 15388.13543200406 16543.119147053072 14668.777280957614 15992.47834476437 16408.174708024373 0.7834411925562829 0.9762256477781991 0.9009665605096895 0.9017617406247597 1.048216663873907 0.9121982823772803 0.9378334705613863 1.008224220026296 0.8939920217806975 0.9746652890612685 1.0 14.00212713783154 -2.0001126289204576 0.01023402633980006 1.7472649285183621 8.204861475426205e-07 0.1887031864309886 0.06244484615473268 14860.011082535357 11.433939018025873 834.7279100137359 1139.8637118817023 0.009997406959518219 2.0001126289204576 -1.7472641080322147 SEFGS(ph)VDGPLPHPR ddPTM_A549_MK2206_60min_R1 2 SEFGSVDGPLPHPR 14 0 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 S(0.012)EFGS(0.988)VDGPLPHPR;S(0.003)EFGS(0.997)VDGPLPHPR 94.461 1.6510999999999998e-05 3837100.0 470.86 414.54 221.44 404.62 500.09000000000003 559.51 422.02 594.0699999999999 726.12 698.9100000000001 724.36 True False 550.3296565782571 435.63831535650127 252.84352176832513 503.7519181640821 426.52742346521745 618.7169768273202 498.69557128463794 678.2812417630727 561.6549793753707 541.0257455859239 544.4814206810274 1.0107409282945132 0.8000976687351661 0.46437493028150173 0.9251957900308121 0.7833645139474635 1.136341761769282 0.9159092529932034 1.2457380839821695 1.0315411289385463 0.9936532727034446 1.0 9.088739010528366 -7.245767735211082 23.744043442885364 1.0338198926680475 0.7856105086199447 0.419126634447778 0.14944147484097445 323.6675851724046 490386.63445258397 0.02094047372617554 0.03617616693808455 5.678482148008235e-08 7.245767735211082 -0.24820938404810278 SEGEIAR ddPTM_A549_PD325901_60min_R1 1 SEGEIAR 7 0 P50395-2;P50395;Q5SX91 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 87.28399999999999 0.035815 5422500.0 1630.8 1601.0 1089.5 1364.6 1915.4 1624.1 1467.7 1580.2 1606.8 1829.8 2182.0 False True 1796.3576154684922 1735.9218887099885 1163.4400216957254 1448.8882427685426 1780.8689117712786 1610.8738680686386 1523.5541266562564 1548.6816713570806 1539.271783797515 1714.266115724378 1913.627832837635 0.9387183780687136 0.9071366223472335 0.6079761183084963 0.7571421244537657 0.9306244825727195 0.8417905720361227 0.796160099948507 0.8092909419385944 0.8043736391077654 0.8958200159444629 1.0 10.902094562799881 -10.689634092665363 0.7762393217490563 1.0101269541891231 0.8173461959681286 0.185722975018213 0.0925859977896949 0.6673812667267045 0.6559196695523584 0.07994267201512972 0.017194658677285 2.0434589006832616e-11 10.689634092665363 -0.1927807582209945 SEGFRAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SEGFRASPR 9 1 Q5T0V7;Q03001-11 Q5T0V7 DST Dystonin 1 S(0.001)EGFRAS(0.999)PR;SEGFRAS(1)PR 63.408 0.0018795 22614000.0 2233.32 2489.1000000000004 2188.29 1641.42 2553.5 2157.7200000000003 2396.95 1739.0 3092.3999999999996 2900.1000000000004 3056.2 True False 2610.2498165683073 2615.784558194305 2498.6224270701227 2043.5679736861441 2177.8835326009953 2386.048498221383 2832.4447883766497 1985.5085754641427 2391.9763375480575 2244.965395793077 2297.2611931710126 1.1362442478581474 1.138653526194651 1.0876527381813133 0.8895670983173296 0.948034789894642 1.0386491990176412 1.232965932126725 0.8642937866039762 1.0412295931601514 0.9772355892602054 1.0 11.165699181721777 -6.010336706951633 22.767858973088106 1.0124798015729572 1.131375072972511 0.2594609865424857 0.09185952394070519 160.9193790029668 354455.308544968 0.01209212647082815 0.03456311396682634 9.764798660742874e-07 6.010336706951633 0.11889527139955369 SEGRIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SEGRISPK 8 1 O60353-2;O60353 O60353-2 FZD6 Frizzled-6 1 SEGRIS(1)PK;SEGRIS(1)PK 86.463 0.00077714 114956000.0 12786.8 11278.8 12409.6 9999.6 15425.2 11745.3 10126.6 10136.8 15681.099999999999 15585.7 15597.8 True False 14944.899232754662 11852.842744350137 14169.467881756722 12449.502448899098 13156.173513638883 12988.17985010085 11966.472139166426 11573.722442648035 12129.355887571097 12064.87954526124 11724.435782619867 1.274679610161605 1.0109520802630536 1.2085415575188134 1.0618423504314007 1.122115704121251 1.1077871968350357 1.0206437530158468 0.9871453652213059 1.034536425671884 1.0290371126554372 1.0 13.517230876857097 -2.0000000000017426 0.20750353753510928 0.9956844125980127 2.0013124509713616 0.4859835313748757 0.06310807656792622 27.988692985818904 0.31663639314886216 0.04123745667581928 9.378809588911665 0.009999999999959874 2.0000000000017426 1.005628038373349 SEGRIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SEGRISPK 8 1 O60353-2;O60353 O60353-2 FZD6 Frizzled-6 1 SEGRIS(1)PK;SEGRIS(1)PK 82.171 0.00099991 210650000.0 13782.4 12986.8 14614.6 14202.9 15699.7 14692.7 13819.9 15838.599999999999 15317.0 15134.900000000001 15705.2 True False 15181.57910193338 14081.24321317857 15606.43464072909 15080.180875873742 14597.007233024717 14573.047522549165 14345.823857039448 15522.68669785867 14673.279756302314 14179.279831061805 13773.559963465468 1.1022262321580403 1.022338687349475 1.133071964120049 1.0948644298114723 1.0597846360522227 1.0580450922785647 1.0415480017578547 1.1269916230105201 1.0653222402358842 1.0294564272905853 1.0 13.749613871328302 -10.306929624208843 0.6476307538872715 0.9972249047852114 1.0787387435775522 0.3323248807381325 0.033651545855910424 0.5699028139433486 0.4282489070351945 0.024102365621895484 0.0068718462146660705 4.932537273947659e-11 10.306929624208843 0.08151383879234075 SEGTTSTS(ph)YK ddPTM_A549_MK2206_60min_R1 2 SEGTTSTSYK 10 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEGTT(0.002)S(0.006)T(0.024)S(0.968)YK;SEGTT(0.001)S(0.002)T(0.26)S(0.737)YK 125.23 3.3474e-12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SEIDLFNIR ddPTM_A549_MK2206_60min_R1 2 SEIDLFNIR 9 0 P08758;D6RBL5;D6RBE9 P08758 ANXA5 Annexin A5;Annexin 0 ; 78.149 0.0051408999999999995 5555500.0 895.34 923.63 1252.03 711.09 1173.88 1030.71 849.55 872.1600000000001 1396.87 1354.6100000000001 1560.6999999999998 False True 1046.4515030386453 970.6388218573001 1429.5866806340134 885.3070819220429 1001.2038070294333 1139.7790480700744 1003.9022382466816 995.7913508779798 1080.4811753430201 1048.6026601824967 1173.1351168712781 0.8920127681707332 0.8273887703966867 1.2186036033485088 0.7546505676883449 0.8534428751051445 0.9715667289117016 0.8557430630190865 0.8488292069320457 0.9210202301544227 0.8938464505086965 1.0 10.196153471271428 -10.159764694315783 0.9071463678148476 0.9937511010572768 0.9056973074940032 0.0 0.11676850488067572 0.997204303092305 1.6268778456873836 0.047476186485980766 0.020776563835350512 6.922059143638534e-11 10.159764694315783 -0.08805379356327359 SEIDLFNIR ddPTM_A549_PD325901_60min_R1 1 SEIDLFNIR 9 0 P08758;D6RBL5;D6RBE9 P08758 ANXA5 Annexin A5;Annexin 0 124.23 0.0002492 3623500.0 1475.0 1278.5 1520.0 1300.2 1866.5 1264.0 1495.2 1667.1 1888.9 1765.7 1647.6 False True 1624.7409141623903 1386.2436818961407 1623.156340502525 1380.5104010315542 1735.4034790754374 1253.7064030778638 1552.1006542048335 1633.8483826853499 1809.5161018266906 1654.213400663753 1444.9556449969243 1.1244226906119659 0.9593676364364052 1.1233260661824536 0.9553998462246865 1.2010081313458805 0.8676435206981958 1.0741510714040896 1.1307256304665516 1.2522987180208858 1.1448195011323508 1.0 10.496809492457169 -8.004278155820883 24.875506516141524 1.1223435893410263 1.036433345443253 0.1507586676983037 0.10260453690178312 315.035269470353 1831799.052587578 0.018406756498797014 0.025103952867811627 9.901975425604794e-09 8.004278155820883 -0.08591024389777324 SEIDLVQIK ddPTM_A549_PD325901_60min_R1 1 SEIDLVQIK 9 0 P20073-2;P20073 P20073-2 ANXA7 Annexin A7 0 147.51 7.7803e-05 1094600.0 974.04 1107.7 1168.2 1021.6 1600.5 1354.2 1399.3 1320.6 1479.6 1197.5 1273.0 False True 1072.9238237496506 1201.0497664734887 1247.481076957271 1084.7019117780612 1488.0864014252538 1343.1718441835794 1452.551127226341 1294.2595970093412 1417.4175574475994 1121.889645633372 1116.4290702118742 0.9610317864134734 1.0757958553027962 1.1173849823890074 0.9715815726405334 1.3328982925380535 1.2030964438508165 1.3010688864906375 1.159285109589379 1.2695992923030963 1.004891108237142 1.0 10.124675880377632 -5.414716894168938 0.9591634449642719 1.157144470803529 0.9062794040755859 0.21149873915651174 0.11525536348021344 2.3206304533085476 1.8922610533131337 0.019774967303193426 0.5665500535978021 3.848425696479442e-06 5.414716894168938 -0.25086506672794306 SEIDMNDIK ddPTM_A549_MK2206_60min_R1 2 SEIDMNDIK 9 0 P04083 P04083 ANXA1 Annexin A1 0 ; 144.77 9.201200000000001e-05 12578100.0 7407.0 7943.1 7770.0 7626.0 10707.1 8687.3 8432.4 8275.6 11006.400000000001 11603.7 11092.5 False True 8657.120516236568 8347.369862276793 8871.90283661437 9494.370342344148 9132.099773609607 9606.584319836966 9964.457929246442 9448.691642962078 8513.467973609155 8982.416110880351 8337.926112574263 1.0382822298198269 1.0011326257363073 1.064041911241553 1.1386968670813564 1.0952483447697703 1.1521551270824364 1.1950763049122297 1.1332184424988716 1.0210534200789043 1.0772961992712007 1.0 13.025472872268331 -8.842980933935536 6.134461198600274 1.0093413448045092 1.1032183734614232 0.20811706727571122 0.0555967740664862 0.16982381450396394 10.089410963238647 0.010110505614356627 0.01074003243018112 1.4355524544971256e-09 8.842980933935536 0.09387702865691394 SEIDMNDIK ddPTM_A549_PD325901_60min_R1 2 SEIDMNDIK 9 0 P04083 P04083 ANXA1 Annexin A1 0 ; 140.45 0.00011413 22015000.0 13470.0 13717.5 14380.3 14686.2 17447.1 15946.9 14644.1 15750.3 15947.1 16967.4 17091.5 False True 14837.464483910104 14873.52186657044 15356.233633768728 15593.333219219809 16221.675885227458 15817.033733577839 15201.389239059004 15436.14791062868 15276.89884453408 15896.07546832541 14989.35385194522 0.9898668501967879 0.992272383018048 1.024476023813121 1.0402938894658365 1.0822131524450145 1.0552178492687467 1.0141457323116212 1.0298074261970591 1.0191832813761712 1.0604910408638144 1.0 13.871650573730076 -5.756334595724912 21.861935659856613 1.021757324911823 0.9910695230381125 0.16752081544733777 0.025639903085180913 36.175667307629766 154897.14560296305 0.003805107398365382 0.013794369471089637 1.7525297710842188e-06 5.756334595724912 -0.030687801873710563 SEILDES(ph)DMYTDNR ddPTM_A549_PD325901_60min_R1 3 SEILDESDMYTDNR 14 0 Q6P4Q7 Q6P4Q7 CNNM4 Metal transporter CNNM4 1 S(0.001)EILDES(0.835)DMY(0.074)T(0.091)DNR;SEILDES(0.903)DMY(0.024)T(0.073)DNR;SEILDES(0.796)DMY(0.089)T(0.115)DNR 62.823 0.004970399999999999 1568690.0 983.0799999999999 999.38 807.52 1072.45 1113.82 1060.0 905.69 1036.79 1209.81 1203.56 894.6700000000001 True False 1082.8815578947538 1083.6012599244152 862.323163212237 1138.6928007893328 1035.5891256704003 1051.3677114418804 940.1565285625845 1016.1104101039791 1158.9658929276036 1127.5670161991654 784.6312617804069 1.380115234559463 1.381032483291088 1.0990170863897768 1.4512457714283837 1.3198417857077793 1.3399513410365804 1.1982144662822574 1.2950164741057129 1.4770835032723446 1.437066136825345 1.0 9.615871007113101 -10.962600963575769 1.2067382193887641 0.9985679344125364 1.3356369855322627 0.0 0.1628588464570778 0.2725589445936327 0.7007921731894585 0.07641053521407479 0.01740373517642188 1.0899310787777321e-11 10.962600963575769 0.3370690511197263 SEILDES(ph)EDYRDTVVK ddPTM_A549_MK2206_60min_R1 2 SEILDESEDYRDTVVK 16 1 Q8NE01 Q8NE01 CNNM3 Metal transporter CNNM3 1 SEILDES(0.983)EDY(0.004)RDT(0.013)VVK;SEILDES(0.993)EDY(0.003)RDT(0.005)VVK 62.203 0.0010341 3471500.0 1300.8600000000001 1303.94 941.3000000000001 1131.5 1711.32 1318.4 1622.62 1431.38 1806.92 1841.05 1883.69 True False 1520.4133650265296 1370.3049764219513 1074.7904942220212 1408.7175507949653 1459.5870949718962 1457.9122129169093 1917.4290504665169 1634.282498417403 1397.6555050583156 1425.1555263352432 1415.9177858007686 1.073800597939847 0.9677856936071885 0.7590769075721273 0.9949147930211703 1.0308416983027235 1.0296588033127863 1.3541951868216133 1.1542213218920327 0.9871021602203233 1.0065242068622298 1.0 10.467521783514526 -6.514027183970068 22.622143505230525 1.0377485775408148 0.926980607767816 0.1664167699295186 0.12438770008080681 200.38745654338217 512130.67580930627 0.01907535859997721 0.04147451598678636 3.0617717809738426e-07 6.514027183970068 -0.11076796977299885 SEILDESEDYRDT(ph)VVK ddPTM_A549_MK2206_60min_R1 2 SEILDESEDYRDTVVK 16 1 Q8NE01 Q8NE01 CNNM3 Metal transporter CNNM3 1 SEILDES(0.003)EDY(0.001)RDT(0.996)VVK;SEILDESEDYRDT(1)VVK 119.38 4.6020000000000004e-08 12858300.0 3395.9 2401.3 2363.6000000000004 2348.4900000000002 3004.9 2705.0 2316.5 2250.22 3813.4 3347.6000000000004 3495.8 True False 3969.0448982162497 2523.5159132184262 2698.7940211868386 2923.870155427724 2562.883190566959 2991.2413045663207 2737.378064738317 2569.1955760097335 2949.6709887484685 2591.3748349908265 2627.696380828229 1.5104655648858634 0.9603529279981099 1.0270570225987068 1.1127123273298962 0.9753345969746926 1.138351190948288 1.0417406229693542 0.9777368476642433 1.1225311304111762 0.9861774190875301 1.0 11.3595828726592 -5.254610134257595 24.965978912337793 1.049661711119031 1.5104657808069586 0.8261331826380728 0.06244648174678323 234.52646087730685 857346.4752306179 0.008463763903820809 0.11469299980617025 5.5640351605076676e-06 5.254610134257595 0.46080406968792764 SEILDESEDYRDT(ph)VVKR ddPTM_A549_MK2206_60min_R1 2 SEILDESEDYRDTVVKR 17 2 Q8NE01 Q8NE01 CNNM3 Metal transporter CNNM3 1 SEILDES(0.001)EDYRDT(0.999)VVKR;SEILDES(0.001)EDYRDT(0.999)VVKR 90.97200000000001 1.9575e-06 10555500.0 897.64 801.54 828.51 590.05 1139.27 689.4 785.5899999999999 640.52 1371.71 1298.69 1247.81 True False 1049.1396868090446 842.334962345853 946.0051762115021 734.6122764883514 971.6848921818436 762.3518504133169 928.321534158331 731.3156715102318 1061.0198751707558 1005.3150270206235 937.9443391959704 1.1185521815808321 0.8980649780006389 1.0085941528496687 0.783215214154477 1.0359728734167706 0.8127900756529158 0.9897405372200568 0.7797005013507882 1.1312183792060506 1.0718280232731132 1.0 9.873358500629895 -8.784342859828456 24.984566807666127 1.0619642297505052 0.9269422550979484 0.2539359151380439 0.10623644103665929 224.95978564058305 245399.21919188902 0.017596080133998347 0.01873847831157641 1.6430740633471858e-09 8.784342859828456 -0.13502197465255683 SEILDESEDYRDT(ph)VVKR ddPTM_A549_PD325901_60min_R1 1 SEILDESEDYRDTVVKR 17 2 Q8NE01 Q8NE01 CNNM3 Metal transporter CNNM3 1 SEILDESEDYRDT(1)VVKR 119.31 3.5868000000000005e-10 6976500.0 647.57 562.54 783.45 842.14 834.11 761.99 1014.9 873.98 863.43 738.67 905.66 True False 713.3108296841618 609.9472200343013 836.6196282675684 894.157075161292 775.5249911232851 755.7846060769796 1053.522574874589 856.5477832759533 827.1430397587056 692.0302501377887 794.269561451757 0.898071466292099 0.767934778867072 1.0533195137660876 1.125760218642852 0.9764002408776552 0.9515467326930733 1.3264043166264263 1.078409427789685 1.0413883143738543 0.8712788248776695 1.0 9.63348490617326 -5.771057881290714 24.994913909604996 1.045650545414832 0.8330031209557958 0.3473249759778876 0.11321691471137009 126.91814091592978 329816.5665426037 0.013797171565481492 0.043698407055355104 1.6941119999181401e-06 5.771057881290714 -0.21264742445903617 SEIPS(ph)PQSQLLEDAEANLVGR ddPTM_A549_PD325901_60min_R1 1 SEIPSPQSQLLEDAEANLVGR 21 0 Q9ULJ8-4;Q9ULJ8-5;Q9ULJ8-3;Q9ULJ8 Q9ULJ8-4 PPP1R9A Neurabin-1 1 SEIPS(1)PQSQLLEDAEANLVGR 292.97 1.6948999999999998e-144 25708000.0 8036.5 8511.5 8914.0 8435.2 10563.0 8106.2 8567.4 9187.7 8237.6 10248.0 10409.0 True False 8852.35956384139 9228.79397611185 9518.957644236521 8956.223146270851 9821.091320371735 8040.185794802041 8893.437095261163 9004.444115888782 7891.402319025647 9600.939531065378 9128.758988087513 0.969722124923354 1.0109582242399955 1.0427438884801532 0.9810997483840015 1.0758407942621417 0.8807534304820627 0.9742219185397016 0.9863820621881951 0.8644551060361498 1.051724505334628 1.0 13.156203030586298 -7.262719554552023 24.999392680329034 0.9384347531821409 1.0153275655887972 0.140816548195567 0.057752322361777526 114.12598481147533 2228667.4740510336 0.008550319163149621 0.014125035649860422 5.461103977744534e-08 7.262719554552023 0.07689281240665635 SEIS(ph)PEGEK ddPTM_A549_MK2206_60min_R1 2 SEISPEGEK 9 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 SEIS(1)PEGEK;SEIS(1)PEGEK 110.39 0.00036371 7540200.0 4220.8 4461.7 3337.8999999999996 3499.2 4540.799999999999 3763.0 4180.8 3587.9 5163.700000000001 5261.299999999999 5247.1 True False 4933.16785134755 4688.7814725384815 3811.264411626137 4356.504157085057 3872.854335161386 4161.198162322762 4940.397242848245 4096.495812482921 3994.1301947344814 4072.7686758684563 3944.100257407114 1.2507714128419893 1.1888088959536052 0.9663203678629853 1.1045622252891363 0.9819360772810158 1.0550437085132238 1.2526043762630175 1.0386388644126388 1.012684752937862 1.0326230090677082 1.0 11.945480509558866 -5.631629449685971 5.148993077106345 1.0311658094334475 1.2359979158308503 0.41924979382960226 0.07601463178048658 0.1240709236601943 4.977487714158966 0.010739003625919657 0.04427586830736981 2.3354498734470315e-06 5.631629449685971 0.2048321063974028 SEKDRS(ph)LER ddPTM_A549_MK2206_60min_R1 2 SEKDRSLER 9 2 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.01)EKDRS(0.99)LER;S(0.187)EKDRS(0.813)LER 62.088 0.0015074 16026200.0 4011.2 3180.2 3126.8999999999996 2570.2 4147.700000000001 3693.3 3584.9 3694.1000000000004 4426.9 4759.9 4523.9 True False 4688.192495575554 3342.058596267538 3570.341438842919 3199.899115380663 3537.5788244249684 4084.122554585878 4236.229926302781 4217.74998770678 3424.2142183066553 3684.635284105878 3400.4907767117184 1.3786811385234945 0.9828165449398206 1.0499488671736517 0.9410109673859994 1.0403141948368448 1.2010391507473026 1.2457701562711556 1.2403356646611325 1.0069764757950255 1.083559852401343 1.0 11.731527263387303 -8.935714245693841 22.940759273790203 1.0030777757323843 1.123374560853502 0.10761067618216746 0.12492326700991813 38.85972685039016 13866.717094049247 0.02161616834652836 0.02301179561907684 1.1595400519596044e-09 8.935714245693841 0.12029678512111763 SEKDTAAVVS(ph)R ddPTM_A549_MK2206_60min_R1 2 SEKDTAAVVSR 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 SEKDT(0.001)AAVVS(0.999)R;SEKDT(0.001)AAVVS(0.999)R 50.053000000000004 0.007591 26180000.0 4554.7 4692.0 4119.4 3792.6000000000004 5950.5 5013.6 4331.3 4643.700000000001 7335.1 5739.1 6584.2 True False 5323.42200827632 4930.802758847648 4703.592862953569 4721.7871702562825 5075.189332579686 5544.135824241666 5118.24114474469 5301.958695734812 5673.7115617477575 4442.633324021946 4949.161425324453 1.075621009457644 0.9962905500752379 0.9503817836463507 0.9540580240715699 1.0254644971995375 1.1202172141471842 1.0341633066472775 1.0712842520361376 1.1463985661724105 0.8976537522678801 1.0 12.27296838358897 -7.005604343300116 21.92757295979947 1.0712659629916685 0.990953017953343 0.03546472898649977 0.07060916844219682 52.241313486253354 204408.98376457722 0.008915560222837147 0.01644431348805533 9.87178428427132e-08 7.005604343300116 -0.08031294503832553 SEKDTAAVVS(ph)R ddPTM_A549_PD325901_60min_R1 2 SEKDTAAVVSR 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 SEKDTAAVVS(1)R;SEKDTAAVVS(1)R 56.339 0.0042762 61486000.0 12492.3 13331.5 14797.2 14724.5 16713.6 15481.5 13973.3 15344.2 16292.8 16445.9 16869.0 True False 13760.50909965479 14454.992291903325 15801.426974792095 15633.998923234203 15539.694394789829 15355.42379687497 14505.061577983157 15038.147893707966 15608.070275738217 15407.503067325151 14794.219941401501 0.9301273844892707 0.9770702577870395 1.068081117989326 1.0567639919616572 1.0503895748705292 1.0379339943367303 0.9804546394089264 1.0164880577193418 1.055011371843889 1.041454238773846 1.0 13.852746008738235 -5.542544667803191 5.060444987629263 1.029356617567886 0.93943211731216 0.6149646617200364 0.02543846378152789 0.09294148803890946 6.518586389783167 0.0040415434824409265 0.01848082985273418 2.8671824666339927e-06 5.542544667803191 -0.08992450025572607 SEKENDPLRT(ph)PEALPEEK ddPTM_A549_PD325901_60min_R1 2 SEKENDPLRTPEALPEEK 18 2 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 SEKENDPLRT(1)PEALPEEK;S(0.002)EKENDPLRT(0.998)PEALPEEK 154.79 5.629600000000001e-23 36696000.0 4943.5 4836.5 4630.1 4125.2 5058.2 4588.3 4618.4 4365.9 4513.700000000001 5323.6 5716.5 True False 5445.360480787645 5244.0888286982245 4944.326429053122 4380.004234991052 4702.929481842684 4550.934406046017 4794.155739285451 4278.818699517708 4324.0048858145665 4987.4669874687415 5013.406739879167 1.086159723980203 1.0460130407900272 0.9862208844384109 0.8736582651773072 0.938070602656914 0.907752879862228 0.9562670631030826 0.853475275700618 0.8624883457827688 0.9948259230187554 1.0 12.291575570009599 -5.852021443716827 2.5408207021390847 0.9244376474783611 1.0752461436067364 0.5793271162277372 0.0471269771127278 0.17983213345929583 2.275791264437426 0.007924376014328653 0.034642698327161756 1.4059781008656149e-06 5.852021443716827 0.15080849612837532 SELDTEKVPLS(ph)PLPGPK ddPTM_A549_MK2206_60min_R1 2 SELDTEKVPLSPLPGPK 17 1 Q8NHU6-2;Q8NHU6 Q8NHU6-2 TDRD7 Tudor domain-containing protein 7 1 SELDTEKVPLS(1)PLPGPK;SELDTEKVPLS(1)PLPGPK 123.53 1.3387999999999998e-10 24095300.0 4440.4 4592.4 4406.1 3601.5 5183.8 3943.2 4376.4 4072.2000000000003 6513.7 5725.6 6414.4 True False 5189.830962643018 4826.133544273641 5030.951234029157 4483.867661677479 4421.269886938335 4360.46680671568 5171.535230960831 4649.4468205894655 5038.357350241492 4432.182983398099 4821.527451566049 1.0763873097844423 1.0009553181546431 1.0434351529814656 0.9299682946368174 0.9169853187297089 0.9043745681255811 1.072592717330915 0.964309934412861 1.044971204841946 0.9192487293541199 1.0 12.235274546824154 -8.759904085576238 24.999969895394234 1.0212364017204032 0.9865112413499362 0.0 0.0644012955353416 90.30653576906374 1470503.4055269067 0.009994810365512244 0.01103917080656177 1.738184666396765e-09 8.759904085576238 -0.03472516037046702 SELDTEKVPLS(ph)PLPGPK ddPTM_A549_PD325901_60min_R1 2 SELDTEKVPLSPLPGPK 17 1 Q8NHU6-2;Q8NHU6 Q8NHU6-2 TDRD7 Tudor domain-containing protein 7 1 SELDTEKVPLS(1)PLPGPK;SELDT(0.001)EKVPLS(0.999)PLPGPK 127.05 4.0581e-12 29399000.0 8625.4 7888.3 9170.7 8647.400000000001 10980.1 9564.599999999999 10302.9 9972.4 10489.7 10559.400000000001 10718.3 True False 9501.04425831612 8553.07472499126 9793.078849899026 9181.530258329689 10208.89565528861 9486.709068733016 10694.982497463201 9773.49265880354 10048.854387914364 9892.677681921528 9400.017048901751 1.0107475559766324 0.9098999161911687 1.041815009372052 0.976756766563781 1.086050759501693 1.0092225385741609 1.1377620319010748 1.0397313758005815 1.0690251236393682 1.0524106105825985 1.0 13.198447658084671 -6.187038588041979 1.5656572283547858 1.0423112616353996 0.9658220921130894 0.28570124054294654 0.04833235664867885 0.43395529358149426 1.9637231510419535 0.007095589262882455 0.029224079203073013 6.500719274233841e-07 6.187038588041979 -0.07648916952231011 SELELTLGK ddPTM_A549_MK2206_60min_R1 1 SELELTLGK 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 111.95 0.00082885 1210500.0 860.28 951.03 678.92 704.97 912.95 951.96 768.18 917.37 1286.8 1130.5 1451.4 False True 1005.474232173349 999.4333648224374 775.2010648435297 877.6876816473058 778.6562643775519 1052.6957753400948 907.7483625170213 1047.4100068277978 995.3418545973484 875.1192648336516 1090.9773233978176 0.921627068326066 0.9160899529146315 0.710556533319307 0.8044967230975734 0.7137236014699639 0.9649107756534333 0.8320506238295265 0.9600657908870822 0.9123396364439407 0.8021424882674167 1.0 10.091405399374464 -8.612874406900676 0.5702244283919103 0.98070750829191 0.8217423464080623 0.027502908650269497 0.09434938787048101 0.5594704091727226 0.40324657256908847 0.025194574645500598 0.027486193290841943 2.4385159078968463e-09 8.612874406900676 -0.15896516188384768 SELELTLGK ddPTM_A549_PD325901_60min_R1 1 SELELTLGK 9 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 164.57 9.946699999999999e-06 1527000.0 1706.7 1537.7 1316.1 1570.1 2135.8 1678.6 1712.4 1790.1 2290.8 1907.2 2411.6 False True 1879.9629275938655 1667.2873755586188 1405.41846035222 1667.081511044179 1985.7887761100017 1664.9300381380563 1777.5663190612347 1754.395051193717 2194.5256424715894 1786.7790665152108 2114.9884883919535 0.888876198576012 0.7883198346986152 0.664504070857035 0.7882224987010106 0.9389123330972909 0.7872052482914075 0.840461462942872 0.8295057211056505 1.0376064241087708 0.8448173956132103 1.0 11.04643409562668 -8.734588916732422 6.844965166723183 1.0178411599077375 0.8122986038823788 0.3187330712964245 0.08377272132785425 0.07606177967100629 12.245882480442562 0.011523747672172808 0.012910381765742975 1.8425152168391394e-09 8.734588916732422 -0.20554255602535865 SELGNQS(ph)PSTSSR ddPTM_A549_MK2206_60min_R1 4 SELGNQSPSTSSR 13 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 SELGNQS(0.928)PS(0.07)T(0.002)SSR;SELGNQS(1)PSTSSR;SELGNQS(0.976)PS(0.021)T(0.003)S(0.001)SR;SELGNQS(0.985)PS(0.013)T(0.002)SSR 187.63 2.4231e-25 129874700.0 5772.3 5571.889999999999 5735.1 5753.6 7770.9 5716.1 6325.200000000001 5998.1 8590.1 9940.2 9646.7 True False 6746.523120814414 5855.475401533588 6548.423418052388 7163.232258288924 6627.810904048982 6320.97390795991 7474.406965285042 6848.349043410853 6644.456065570938 7694.701916231277 7251.158154624311 0.9304062850307473 0.8075227814193174 0.9030865523014742 0.9878742271978562 0.9140348014368161 0.8717192168714194 1.0307880211547114 0.944448996612138 0.9163303190861369 1.0611686784578136 1.0 12.8239957253746 -7.681276622249194 0.01310469112745866 1.8535029951691906 1.1735891019878355e-07 0.35072843391228414 0.056283419907656784 923.1776095720536 5.422260167152049 372.4276604945524 393.98245959219423 2.0831635971596885e-08 7.681276622249194 -1.8535028778102804 SELGNQS(ph)PSTSSR ddPTM_A549_PD325901_60min_R1 4 SELGNQSPSTSSR 13 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 SELGNQS(0.992)PS(0.006)T(0.001)S(0.001)SR;SELGNQS(0.994)PS(0.005)TSSR;SELGNQS(1)PSTSSR;SELGNQS(0.778)PS(0.213)T(0.009)S(0.001)SR 224.5 4.5231e-46 168523000.0 14650.900000000001 12965.699999999999 13302.3 13592.2 16977.0 15355.9 13428.7 15458.3 14409.0 14865.900000000001 16162.3 True False 16138.248582577464 14058.365042128102 14205.07407122812 14431.759323874081 15784.594087470494 15230.84664163242 13939.736526966599 15149.972079698244 13803.439838647248 13927.264536969627 14174.439561261097 1.1385457966665207 0.9918109976319467 1.002161250173922 1.018153787421426 1.1135956394784008 1.0745290193524473 0.9834418120533002 1.0688233572989572 0.9738261452235617 0.982561919064017 1.0 13.791004073575968 -8.767398580570132 24.99521593340534 0.9876401217315367 1.0452292503281455 0.26162194023284335 0.047122292674606846 149.07379617613506 625270.5250232333 0.007963369506945686 0.008585680581077006 1.708446641670707e-09 8.767398580570132 0.05758912859660881 SELNEIKENQRS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 SELNEIKENQRSPVR 15 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR 157.42 3.4470000000000004e-20 434030000.0 11203.0 11980.5 12406.0 10212.599999999999 14477.5 11678.5 11901.0 11623.3 15137.7 16122.0 15841.599999999999 True False 13093.792512946971 12590.256277147111 14165.357347623913 12714.687458461025 12347.878928228285 12914.311118439098 14063.257650960808 13270.93836986336 11709.035119939614 12480.029002784713 11907.693514082172 1.0996077869708443 1.0573211564655853 1.189597072755677 1.0677708024164791 1.0369664716030478 1.0845350615689335 1.1810228096926951 1.114484375514788 0.9833168032157007 1.048064344956955 1.0 13.539606373940082 -8.762054433930269 24.998789273934587 0.9921218178122863 1.103704339005667 0.41900599867174504 0.0476939928376869 8.681254656148736 352846.94879921654 0.0077181813155245945 0.008459837225290475 1.7295995597708253e-09 8.762054433930269 0.11158252119338063 SELNEIKENQRS(ph)PVR ddPTM_A549_PD325901_60min_R1 4 SELNEIKENQRSPVR 15 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR 153.25 2.3386999999999995e-15 1088940000.0 37709.0 40451.0 37844.8 41217.5 48165.2 37850.7 39732.899999999994 37647.399999999994 43510.6 42707.8 46166.5 True False 41537.18992010141 43859.94773279686 40413.175707269744 43763.41136326568 44782.24251291946 37542.4564485596 41244.95725217712 36896.49307318604 41682.00079418734 40011.22221944125 40488.31317355577 1.0259056667055888 1.08327426595394 0.998144218407817 1.0808899638686105 1.106053549846779 0.9272418015448417 1.0186879625085379 0.9112874847373077 1.0294822759228015 0.98821657617423 1.0 15.305217918171646 -7.244889543932359 24.997972726250456 1.0006730840440714 1.0580617422570835 0.38968144094582235 0.045503448663873014 860.3528368514379 1299534.56074742 0.006608380762176339 0.011424957795255309 5.689976281665921e-08 7.244889543932359 0.05738865821301209 SELNEIKENQRS(ph)PVRVK ddPTM_A549_PD325901_60min_R1 2 SELNEIKENQRSPVRVK 17 3 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 SELNEIKENQRS(1)PVRVK;SELNEIKENQRS(1)PVRVK 71.148 0.0001899 22786000.0 3775.7 3675.8 4632.7 4786.5 4122.5 6818.799999999999 5620.0 5313.799999999999 6141.8 5242.7 5210.5 True False 4159.00628447657 3985.5725662212235 4947.102880688192 5082.151234069781 3832.9498218529266 6763.269953565932 5833.872175382002 5207.812090404543 5883.681504684828 4911.675027275217 4569.641532080889 0.9101384113564533 0.872184948915742 1.0826019603413874 1.1121553404989972 0.838785667309774 1.4800438734821557 1.276658603180503 1.1396544026141693 1.2875586549576814 1.0748490866938036 1.0 12.157865281417395 -6.033206977296452 0.9650002894745983 1.1611056440284184 0.8603904175103172 0.29313837772655016 0.15618243034981627 0.9126803736009664 1.2340573115796147 0.026529245789723037 0.2147496663600957 9.263882174316046e-07 6.033206977296452 -0.30071522651810123 SELPDS(ph)PEPVTEINEDSVLIPPTAQPEK ddPTM_A549_PD325901_60min_R1 1 SELPDSPEPVTEINEDSVLIPPTAQPEK 28 0 Q86YC2 Q86YC2 PALB2 Partner and localizer of BRCA2 1 S(0.003)ELPDS(0.996)PEPVT(0.001)EINEDSVLIPPTAQPEK 119.75 5.4358e-21 3591000.0 556.32 880.99 388.62 577.74 383.39 556.83 601.43 607.74 488.18 577.42 533.69 True False 612.7971968588614 955.2341191346737 414.9940901619025 613.4256876572599 356.4620090236975 552.2953610963979 624.3177477651241 595.6181489371928 467.66349229168 540.961602656886 468.04951333965073 1.3092572033381675 2.0408826244019327 0.8866457037863698 1.310599990330753 0.7615903849151591 1.1799934523072824 1.333871161002733 1.2725537191296448 0.9991752559569683 1.1557785816226775 1.0 8.870517345376422 -5.773057280430202 24.999841375774665 1.051325424480844 1.6750699884544427 0.461077073920246 0.23500901073386488 101.2894702321773 217960.20964512674 0.02955738088032146 0.0930084064932534 1.686330595410245e-06 5.773057280430202 0.6237445639735986 SELPVVDETTTLLNERNS(ph)LLHK ddPTM_A549_MK2206_60min_R1 2 SELPVVDETTTLLNERNSLLHK 22 1 Q6P4Q7 Q6P4Q7 CNNM4 Metal transporter CNNM4 1 SELPVVDETT(0.252)T(0.013)LLNERNS(0.734)LLHK;SELPVVDETTTLLNERNS(1)LLHK 226.4 9.488799999999997e-88 20474100.0 2430.66 2941.9 2517.4 2440.8999999999996 3686.3 2695.8999999999996 2761.0 3239.0 4496.2 3549.5 4357.1 True False 2840.895984068527 3091.630144129131 2874.4051738601042 3038.920609576164 3144.050153212084 2981.1783486064123 3262.6379610371196 3698.138169021482 3477.8178789560166 2747.6654847651866 3275.111820157526 0.8674195386500989 0.9439769735802274 0.8776510029883046 0.9278830087181569 0.9599825367369782 0.9102523859667863 0.9961913180967952 1.1291639406814542 1.061892866543024 0.8389531825612689 1.0 11.6773284492153 -7.888487836182362 4.245105738932899 1.0385202398152427 0.9170022143153165 0.24407598036571854 0.0720202564320388 0.10621707034588747 3.452546902009941 0.006892085443563946 0.009649758217911994 1.2927429077341584e-08 7.888487836182362 -0.12151802549992619 SELPVVDETTTLLNERNS(ph)LLHK ddPTM_A549_PD325901_60min_R1 2 SELPVVDETTTLLNERNSLLHK 22 1 Q6P4Q7 Q6P4Q7 CNNM4 Metal transporter CNNM4 1 SELPVVDETTTLLNERNS(1)LLHK;SELPVVDETT(0.007)TLLNERNS(0.993)LLHK 246.77 4.1665999999999995e-99 46732000.0 2945.3 2937.1000000000004 2968.9 3244.8 3610.2 3163.8999999999996 3295.2 3015.6 3690.8999999999996 3653.1000000000004 3332.9 True False 3244.3046877847396 3184.6197247533455 3170.387407446018 3445.2239265245225 3356.6320065138725 3138.134247387703 3420.6006392026284 2955.4514923075653 3535.7843084504907 3422.4426425580523 2922.974428993838 1.1099326273960979 1.0895133714356757 1.0846442500481763 1.178670566649622 1.1483617417991954 1.0736098873324487 1.1702465150815862 1.0111109638837679 1.209652836295115 1.1708766962207549 1.0 11.513221492757422 -11.088761037535289 1.417962407931325 1.000029079204961 1.1289884888716077 0.0 0.07326557385825379 0.33072569375241345 1.188339229250695 0.040185311920430226 0.008812157004876638 8.151526832573379e-12 11.088761037535289 0.12895940966664665 SELS(ph)PVAR ddPTM_A549_MK2206_60min_R1 2 SELSPVAR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.016)ELS(0.984)PVAR;SELS(1)PVAR 135.86 0.0010839 106080000.0 7741.200000000001 8147.6 8139.1 7297.6 11064.7 8601.8 7727.0 8008.1 12260.4 11851.099999999999 12544.6 True False 9047.725305831047 8562.278038786677 9293.346766729474 9085.51232760171 9437.097287319459 9512.03676658727 9130.895880091937 9143.27269877769 9483.43897583566 9173.928279053587 9429.429606653066 0.959519894973 0.9080377494674166 0.9855682850818911 0.9635272446587118 1.0008131648451972 1.008760568070408 0.968340213669924 0.9696527870918645 1.0057277450954707 0.9729038406077918 1.0 13.202954788484886 -6.164299621033297 1.3005774935289736 0.9978209309447439 0.934462937838309 0.36494402216984867 0.022009228651074585 0.27721262866183866 0.8233779098955335 0.002987468814436531 0.014815303386206034 6.850154692173545e-07 6.164299621033297 -0.06335799310643486 SELS(ph)QDAEPAGSQETK ddPTM_A549_MK2206_60min_R1 1 SELSQDAEPAGSQETK 16 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 SELS(1)QDAEPAGSQETK 147.92 6.1737e-32 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SELSQDAEPAGS(ph)QETK ddPTM_A549_MK2206_60min_R1 2 SELSQDAEPAGSQETK 16 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 SELSQDAEPAGS(1)QETK;SELSQDAEPAGS(1)QETK 293.83 2.9032999999999993e-124 43546000.0 6767.6 7791.7 7740.6 7297.4 10330.0 9234.8 7676.900000000001 8963.7 10221.2 10251.6 11608.7 True False 7909.805428065692 8188.264248958482 8838.333474529887 9085.26332759274 8810.470684068254 10212.020406435884 9071.693358596836 10234.331925179955 7906.1145199024095 7935.756439954585 8725.93940617903 0.906470359221677 0.9383819744565487 1.0128804548277368 1.0411788238134299 1.0096873555905472 1.170306133366515 1.0396236939455448 1.17286305219273 0.9060473780397691 0.9094443670254118 1.0 13.091094740188494 -4.2158105714371725 16.163129609492625 0.9936463210875801 1.0097506040935234 0.0 0.09233612499199521 0.0 0.0 0.012723186024709763 0.0 6.084003126539439e-05 4.2158105714371725 0.016104283005943243 SELSQDAEPAGS(ph)QETK ddPTM_A549_PD325901_60min_R1 2 SELSQDAEPAGSQETK 16 0 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 SELSQDAEPAGS(1)QETK;SELSQDAEPAGS(1)QETK 289.95 4.303599999999999e-124 47252000.0 9684.7 11472.099999999999 11821.7 10470.8 12971.8 9847.0 10361.599999999999 10917.4 11859.0 12398.099999999999 13198.2 True False 10667.883614500679 12438.894128338454 12623.991651657047 11117.557535087826 12060.705518280605 9766.809296762442 10755.916358085078 10699.643892465378 11360.607470783387 11615.281850127014 11574.90507028309 0.9216389723911379 1.0746432953712537 1.090634573243053 0.9604880098438614 1.0419701453314496 0.8437917406197416 0.9292444553778114 0.9243828634012023 0.9814860166715421 1.0034883033250601 1.0 13.498712741052808 SELSQDAEPAGS(ph)QETKDSGSQEVLSELR ddPTM_A549_MK2206_60min_R1 1 SELSQDAEPAGSQETKDSGSQEVLSELR 28 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 SELSQDAEPAGS(0.999)QET(0.001)KDSGSQEVLSELR 178.76 3.713199999999999e-58 13452000.0 1495.6 1441.9 1303.0 1888.2 1726.8 1248.9 1060.0 1070.6 2508.0 2080.8 2535.7 True False 1748.0207160906452 1515.286551147148 1487.7849930641598 2350.8090847645203 1472.7900074781287 1381.0577690472749 1252.5882791377583 1222.3608285749917 1939.9420044530243 1610.7458348216373 1906.0157082402138 0.9171071930485598 0.7950021317222941 0.7805733114538714 1.233362912278921 0.7727061225733162 0.7245783773326705 0.6571762623584293 0.6413172899312425 1.0177995889887677 0.8450852885723626 1.0 10.89634429378763 -8.808485848503649 24.991235985804806 1.0084055163768577 0.8176288516914025 0.10683085941234305 0.15924695953257426 126.20417746064872 67039.49173088618 0.027097762582348084 0.02884721335912715 1.554225934436685e-09 8.808485848503649 -0.19077666468545518 SELSQDAEPAGSQET(ph)KDSGSQEVLSELR ddPTM_A549_MK2206_60min_R1 1 SELSQDAEPAGSQETKDSGSQEVLSELR 28 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 SELSQDAEPAGS(0.434)QET(0.551)KDS(0.007)GS(0.008)QEVLSELR 88.744 8.522300000000001e-10 12002000.0 801.79 952.22 1107.3 965.28 1200.4 1103.0 765.98 811.24 1193.0 913.72 1355.8 True False 937.1125501165537 1000.683930739537 1264.3317903453137 1201.7736433330654 1023.8227501602652 1219.7187278878564 905.1486509942827 926.2357543183048 922.7874048295281 707.3100173938997 1019.1174418235917 0.9195334233900464 0.9819122798535662 1.2406144164140098 1.1792297864931365 1.004617042299123 1.1968382424162147 0.8881691293347161 0.9088606634588787 0.90547700094143 0.6940417152789093 1.0 9.993104600124111 -7.7739508456571 24.99485259126336 0.9454212727257506 1.0897549689783486 0.37114795203842776 0.12153025576084245 199.53019698917902 398611.88322697865 0.015456204195552747 0.021434230260358053 1.6828645203604096e-08 7.7739508456571 0.14433369625259795 SELSQDAEPAGSQETKDS(ph)GSQEVLSELR ddPTM_A549_MK2206_60min_R1 1 SELSQDAEPAGSQETKDSGSQEVLSELR 28 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 SELSQDAEPAGS(0.034)QET(0.034)KDS(0.461)GS(0.461)QEVLS(0.01)ELR 48.085 0.0032413000000000003 1850400.0 647.36 970.0 711.52 445.19 770.89 555.14 505.34 568.13 1070.3 800.89 983.5 True False 756.6185415675584 1019.3688567950167 812.424235046056 554.2615699853383 657.4931021918081 613.8845463278916 597.1537367730889 648.6641673251545 827.8787589178914 619.9683927577378 739.2698067808692 1.023467392591392 1.3788860946909645 1.0989549790809607 0.7497419276445978 0.8893817874895289 0.8303930996465764 0.8077615659340655 0.8774390099194574 1.1198600988763054 0.8386226342143929 1.0 9.529957181839276 -6.001010722701478 24.99785764144074 0.9806087280687085 1.210612732787275 0.32232764072085973 0.14396117553612398 39.405127344080405 974707.8048539638 0.021711513312636096 0.06630866364724138 9.97675430979335e-07 6.001010722701478 0.23000400471856663 SELTLTPDPAPPMAHS(ph)PLHR ddPTM_A549_MK2206_60min_R1 2 SELTLTPDPAPPMAHSPLHR 20 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5;Q9NRA0-3 E9PCV4 SPHK2 Sphingosine kinase 2 1 SELT(0.001)LT(0.029)PDPAPPMAHS(0.97)PLHR;SELTLTPDPAPPMAHS(1)PLHR 81.373 0.0001141 9828400.0 1305.1399999999999 1550.99 1415.6 1194.6799999999998 1932.35 1533.27 1508.43 1418.2 2184.6 2253.5 2516.8 True False 1525.4157243905752 1629.9287661860847 1616.35336621767 1487.3766536312232 1648.103874768566 1695.5196136977463 1782.4922055658194 1619.234193055346 1689.7915880893436 1744.4327848762773 1891.8090998536763 0.8063264546663613 0.8615714800780655 0.854395597495904 0.7862192087702008 0.8711787436142685 0.8962424453021649 0.942215684290602 0.8559183868925184 0.8932146421222109 0.922097681532033 1.0 10.885550800089069 -14.999999999715143 0.10137695651595663 1.4637835876700662 0.7665636096082981 0.5221936828414806 0.03973524671013138 38.74369097112421 0.2819355362418188 3.7657420380340665 0.2214863535233773 1.0000000006559066e-15 14.999999999715143 -0.6972199780617682 SELVQK ddPTM_A549_MK2206_60min_R1 1 SELVQK 6 0 P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8 P31946-2 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed 0 89.67299999999999 0.023272 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SEMT(ph)PEELQKR ddPTM_A549_PD325901_60min_R1 1 SEMTPEELQKR 11 1 P62316;K7ERG4 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 1 S(0.057)EMT(0.943)PEELQKR 51.875 0.0073596 13739000.0 3662.3 3390.0 3068.0 3365.3 3707.7 3421.1 3715.5 3744.8 2756.4 4047.5 4069.2 True False 4034.0939999572365 3675.687197206033 3276.2129293827297 3573.166937849167 3447.283942870611 3393.239695862089 3856.8953856996145 3670.1070262612316 2640.5580936392025 3791.940159249329 3568.7141967841 1.1304054562824077 1.0299752220332832 0.9180373514738295 1.0012477157932904 0.965973668044666 0.9508297691420239 1.080752106508054 1.0284115857662406 0.7399186227966104 1.0625508096631515 1.0 11.801188651335499 -8.711392905687125 24.999995254369516 0.877183426143788 1.0087905998081903 0.03517335352452866 0.09656599437289595 112.05498700932232 55975.23513403074 0.017852628018275352 0.02024296191748397 1.943600912612815e-09 8.711392905687125 0.13160717366440233 SENMKGS(ph)R ddPTM_A549_MK2206_60min_R1 2 SENMKGSR 8 1 Q9BQU1;H0Y483 Q9BQU1 PFKFB3 1 SENMKGS(1)R;SENMKGS(1)R 57.96 0.0099137 29647000.0 2034.93 1678.32 2205.56 1739.1399999999999 2996.1000000000004 2079.8999999999996 1649.54 2130.3 2477.5 2843.3 2885.1000000000004 True False 2378.3764347381243 1763.7393193156822 2518.341572757168 2165.22937807296 2555.377658909671 2299.993637474118 1949.2400660083922 2432.2765487701345 1916.350205754533 2200.9965552423896 2168.650045290783 1.0967082678474387 0.8132890427137549 1.1612484818496829 0.9984226744074034 1.1783264268288312 1.0605646782285354 0.8988264705230616 1.1215624918606926 0.8836604181093587 1.0149155047038811 1.0 11.082581548987458 -8.770596031547857 24.999019688934755 0.9450618692955374 1.0365841158304399 0.07688540384994158 0.10829481810087788 286.4959425965531 782174.6409384833 0.01801749011593513 0.019310823898580028 1.6959145587947842e-09 8.770596031547857 0.09152224653490248 SENMKGS(ph)R ddPTM_A549_PD325901_60min_R1 2 SENMKGSR 8 1 Q9BQU1;H0Y483 Q9BQU1 PFKFB3 1 SENMKGS(1)R;SENMKGS(1)R 47.198 0.024175 36422000.0 2285.3 1893.71 2512.37 1985.2800000000002 2062.5 2116.7200000000003 2009.17 1927.55 2517.7 2572.3999999999996 2380.71 True False 2517.301973651058 2053.2995876758227 2682.8745363081125 2107.906236701987 1917.63711523873 2099.4821341162806 2085.6300638100106 1889.1035031162787 2411.889824537593 2409.9782249914706 2087.89776256411 1.205663427963831 0.9834291814912441 1.2849645152228728 1.009583071784753 0.9184535515205084 1.0055483423373872 0.9989138841974166 0.9047873593179698 1.1551762101490994 1.154260648295259 1.0 11.027835354303159 -2.000004079791439 0.7242528742652736 1.0448181942481711 21.333087037422114 0.14934238235445874 0.10858173380854158 534.7188596510869 2.3941145289892747 0.01754919346745832 17658.894418554064 0.009999906059771744 2.000004079791439 20.28826884317394 SENNSSNS(ph)DIVHVEKEEVPEGMEEAAVASVVLPAR ddPTM_A549_PD325901_60min_R1 1 SENNSSNSDIVHVEKEEVPEGMEEAAVASVVLPAR 35 1 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.111)ENNS(0.08)S(0.37)NS(0.439)DIVHVEKEEVPEGMEEAAVASVVLPAR 86.822 2.929e-09 4773700.0 472.54 747.94 509.11 822.18 849.49 633.5 586.03 874.03 767.68 605.81 702.31 True False 520.5119129344382 810.9715286956582 543.6612661271324 872.9641912937414 789.8247529814053 628.3409860362556 608.3316923379203 856.5967859867297 735.4170792791116 567.5590532118184 615.9303223098991 0.8450824615719242 1.316661153577086 0.8826668316770979 1.4173099775635307 1.2823280887022361 1.0201494605425712 0.9876631662758834 1.3907365085944603 1.193993951330576 0.9214663293135564 1.0 9.266623343708423 -10.777741502263524 1.1121749838273263 1.0029687012281892 1.157357144786013 0.11674126626721382 0.18903911495982723 0.9584364614709093 2.1669379175266243 0.10934521960627938 0.029880330671339012 1.668239875217417e-11 10.777741502263524 0.15438844355782377 SENPTGPTEGS(ph)DR ddPTM_A549_MK2206_60min_R1 1 SENPTGPTEGSDR 13 0 Q6GPG7;Q92633;Q92633-2 Q6GPG7 LPAR1 Lysophosphatidic acid receptor 1 1 SENPTGPT(0.03)EGS(0.97)DR 101.36 0.00014357 6858000.0 745.98 657.63 543.05 755.11 571.96 682.52 595.19 801.14 940.05 1079.3 932.35 True False 871.8831865400508 691.1005580351616 620.0626557816515 940.1119838981756 487.82544167083074 754.7438133798906 703.3283187358505 914.7040483883521 727.1301759513815 835.4853803935957 700.8217634490525 1.2440869162640296 0.9861288477029473 0.8847651259145409 1.3414423365956425 0.6960763308348573 1.0769411749793043 1.0035765945316284 1.3051878467453562 1.0375393771632515 1.1921510203704353 1.0 9.452903767128902 -5.2538256883653975 23.15080465438194 1.029157076824392 1.2440872193928323 0.07659027711327393 0.17523579763600627 493.5960824305332 1500758.0868735611 0.02041343886266559 0.2816569915572725 5.574094299974819e-06 5.2538256883653975 0.21493014256844023 SENPTGPTEGS(ph)DR ddPTM_A549_PD325901_60min_R1 2 SENPTGPTEGSDR 13 0 Q6GPG7;Q92633;Q92633-2 Q6GPG7 LPAR1 Lysophosphatidic acid receptor 1 1 SENPT(0.003)GPT(0.001)EGS(0.996)DR;SENPT(0.006)GPT(0.006)EGS(0.987)DR 84.84200000000001 0.00034577 16958400.0 2299.1 2474.9 2259.4 2003.04 2635.6000000000004 2300.66 2356.09 2043.86 2177.9 2028.92 2130.61 True False 2532.5029394920352 2683.4685086623062 2412.7364708759246 2126.763231566099 2450.4845483263966 2281.9241877413915 2445.75229425192 2003.0936089228476 2086.3704368512626 1900.8136449423455 1868.5584770495848 1.3553244228624866 1.4361169541236127 1.2912287736831152 1.1381839303869228 1.3114304842070883 1.2212217149042628 1.3088979147785154 1.0719994228308503 1.1165668414860628 1.0172620596512938 1.0 10.867709998623893 -2.0000000000000013 0.08897762205245596 0.8118399823804773 2.45638107065808 0.7376699061242167 0.07128210889493646 45.644778987630275 0.28379030519718934 0.681764277126335 9.18971558344787 0.009999999999999969 2.0000000000000013 1.6445410882776028 SEPFS(ph)PSLRPEPPK ddPTM_A549_MK2206_60min_R1 2 SEPFSPSLRPEPPK 14 1 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 SEPFS(0.857)PS(0.142)LRPEPPK;S(0.008)EPFS(0.905)PS(0.087)LRPEPPK 99.45100000000001 9.7291e-06 10461900.0 2804.3 2867.0 2568.6 2528.0 2841.0 2561.8999999999996 1927.6200000000001 2254.37 3292.0 3232.7 3597.7 True False 3277.5972814475767 3012.9180540529 2932.866103748734 3147.360113486231 2423.0926634499424 2832.9985575484134 2277.843602482571 2573.933851218575 2546.367256243762 2502.430824792344 2704.2917985312984 1.211998380954171 1.114124613212678 1.0845227964458475 1.1638389448932853 0.8960174581625862 1.04759351749209 0.8423068855659986 0.9517959018388767 0.9416022552102901 0.9253553282051201 1.0 11.401035114381715 -6.753586553579893 24.99998242052844 0.9616091947491118 1.137293002421331 0.7192770998083324 0.059406517208095456 77.95669377541695 248178.06601782527 0.008112933715961248 0.016651519964492198 1.763654238480097e-07 6.753586553579893 0.17568380767221925 SEPFS(ph)PSLRPEPPK ddPTM_A549_PD325901_60min_R1 1 SEPFSPSLRPEPPK 14 1 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 S(0.004)EPFS(0.85)PS(0.146)LRPEPPK 90.75399999999999 1.8874000000000003e-05 9411000.0 2214.0 2809.6 2270.7 2295.3 2538.6 2526.2 2466.6 2248.6 2410.6 2766.5 3202.8 True False 2438.7636501393436 3046.3748522920587 2424.8033568283454 2437.075467995483 2360.2974936945643 2505.62746475894 2560.4678127753095 2203.749909007425 2309.2908650873114 2591.822717866157 2808.8759042219876 0.8682347434693243 1.0845530226924904 0.8632646793628912 0.8676337264783909 0.8402996693968678 0.8920392178923823 0.9115631662212991 0.7845664899951595 0.8221405800150317 0.9227259609334891 1.0 11.455777172452034 -4.94851569447959 16.476942423007475 0.9036733374067285 0.6184704957538811 0.008790405890765518 0.07996525271253095 15551201.94986478 118877671.16423145 0.01241724726021223 143852980.70870936 1.1258597819799924e-05 4.94851569447959 -0.28520284165284737 SEPFS(ph)PSLRPEPPKHPESIK ddPTM_A549_MK2206_60min_R1 2 SEPFSPSLRPEPPKHPESIK 20 2 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 S(0.007)EPFS(0.837)PS(0.156)LRPEPPKHPESIK;S(0.005)EPFS(0.731)PS(0.264)LRPEPPKHPESIK 78.837 6.4965e-05 16986300.0 1240.1799999999998 1839.55 1379.8 1456.3899999999999 1936.56 1699.1100000000001 1534.49 1922.6799999999998 2549.1 2347.0 3053.2 True False 1449.4920645100938 1933.1752376466734 1575.4763878971046 1813.2056153798305 1651.6945893455197 1878.9086924220646 1813.2869702397145 2195.225777960552 1971.732920076237 1816.8110699377091 2295.0061759668015 0.6315852565841031 0.8423398846986971 0.6864802388749192 0.7900656801570453 0.7196906947972468 0.8186943948551901 0.7901011288023413 0.9565228193931915 0.8591405725719315 0.7916366800940541 1.0 11.164282320664869 -8.333609503016971 0.07086722285336734 1.368797767161576 0.3170576143410146 0.302778161463496 0.08627346510641873 6.898430565017197 0.36704707594928904 2.5270003037894804 2.7639734595094096 4.638638166064584e-09 8.333609503016971 -1.0517401528205614 SEPFS(ph)PSLRPEPPKHPESIK ddPTM_A549_PD325901_60min_R1 4 SEPFSPSLRPEPPKHPESIK 20 2 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 S(0.063)EPFS(0.874)PS(0.063)LRPEPPKHPESIK;S(0.003)EPFS(0.941)PS(0.056)LRPEPPKHPESIK;S(0.01)EPFS(0.827)PS(0.162)LRPEPPKHPESIK;S(0.011)EPFS(0.956)PS(0.033)LRPEPPKHPESIK 86.131 5.3038e-06 44303600.0 8180.9 8164.0 8467.800000000001 9265.4 10345.3 9696.3 10614.099999999999 11250.2 11074.600000000002 12182.300000000001 11873.8 True False 9011.418945539725 8852.00893156049 9042.475829017956 9837.702714749852 9618.681817347497 9617.336547598023 11018.025383758386 11025.805935388842 10609.173074958904 11413.10749895567 10413.397874219767 0.8653677747058054 0.8500596095992091 0.8683501714079538 0.9447159163201522 0.9236833100519733 0.923554123616794 1.058062461152616 1.058809628573321 1.0188003188876336 1.0960022498718562 1.0 13.346153273972229 -6.97181482477793 0.9443081406926862 1.0155949245440266 0.8592406140936268 0.7614032197483341 0.04034754865141791 0.19544514864891438 0.3363166917219504 0.005782444009581338 0.016766755692208906 1.067050995272061e-07 6.97181482477793 -0.1563543104503997 SEPHS(ph)PGIPEIFR ddPTM_A549_MK2206_60min_R1 2 SEPHSPGIPEIFR 13 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 S(0.002)EPHS(0.998)PGIPEIFR;S(0.002)EPHS(0.998)PGIPEIFR 86.54799999999999 6.5926e-05 27282000.0 739.7 850.86 619.24 663.39 996.97 481.11 619.0600000000001 802.6 1210.5 1153.4099999999999 850.21 True False 864.54327607131 894.1651396831003 707.0575434420955 825.9205797807091 850.3170336781735 532.020740865029 731.5351887575663 916.3710078594141 936.3236827712864 892.853879921965 639.0793923977255 1.3527947956945996 1.3991456309181447 1.1063688672378038 1.2923599002026724 1.3305342713178678 0.8324798877788419 1.1446702826904824 1.4338922812411992 1.465113245567733 1.397093836138445 1.0 9.31985135710292 -11.10075588902556 1.466482735206466 1.0013084983238483 1.2811119619308815 0.0 0.2080692258298301 0.4951368604016986 1.9180676601907432 0.13290957705303663 0.029574989431389215 7.929469098290511e-12 11.10075588902556 0.27980346360703323 SEPHS(ph)PGIPEIFR ddPTM_A549_PD325901_60min_R1 4 SEPHSPGIPEIFR 13 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 S(0.001)EPHS(0.999)PGIPEIFR;S(0.001)EPHS(0.999)PGIPEIFR;S(0.017)EPHS(0.983)PGIPEIFR;S(0.003)EPHS(0.997)PGIPEIFR 102.29 4.1272e-05 50070500.0 1183.03 1386.1 987.8299999999999 1136.61 1308.07 1145.3899999999999 1105.19 1423.98 1340.12 1149.8 1648.36 True False 1303.1303346993438 1502.9115115183722 1054.8700841043483 1206.8158182714003 1216.1956757965213 1136.0623235928445 1147.2486102331732 1395.5776018093 1283.7994167928355 1077.2014317739038 1445.6221698149614 0.9014321735714275 1.0396295400690652 0.7296997141648505 0.8348072155159822 0.8412956726806379 0.7858639327164301 0.7936019758053519 0.9653819863512005 0.8880601332761526 0.7451472827867498 1.0 10.497474821071902 -10.00468428026026 0.5718524364024992 1.0006612107071584 0.8547192216246027 0.0 0.10965830180689874 0.8482780637669216 0.5419424592205492 0.05756458184524345 0.02021511940406691 9.892720059308868e-11 10.00468428026026 -0.14594198908255573 SEPIS(ph)PPRDR ddPTM_A549_MK2206_60min_R1 2 SEPISPPRDR 10 1 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 SEPIS(1)PPRDR;SEPIS(1)PPRDR 119.39 1.6451e-05 90132000.0 7012.9 7375.6 6307.9 6300.5 9447.6 7537.900000000001 6654.5 6510.7 11294.400000000001 11191.7 10028.0 True False 8196.506071056487 7750.986536265278 7202.455071181437 7844.122782840193 8057.870555160047 8335.555574746935 7863.536512756798 7433.611663182513 8736.236433450646 8663.487197026783 7537.77084127967 1.0873912518233289 1.0282863063198948 0.9555152607901108 1.040642246628516 1.0689991411031117 1.1058382843238344 1.043217773309466 0.9861817000953728 1.1589946971600313 1.1493434039653032 1.0 12.879922220394684 -6.618677362774904 4.621320549522204 1.069322811808751 1.0204642474840673 0.1238587314902635 0.05799490922798626 0.4038539628766878 15.038825281118838 0.009597549131270122 0.02050202415177541 2.406149663973618e-07 6.618677362774904 -0.04885856432468372 SEPIS(ph)PPRDR ddPTM_A549_PD325901_60min_R1 4 SEPISPPRDR 10 1 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 SEPIS(1)PPRDR;SEPIS(1)PPRDR;S(0.003)EPIS(0.997)PPRDR;S(0.002)EPIS(0.998)PPRDR 117.03 2.1329000000000002e-05 121129000.0 12909.9 13336.199999999999 12665.7 14535.099999999999 15547.7 13319.1 14504.9 15422.599999999999 15132.8 15679.1 16071.000000000002 True False 14220.503544233925 14460.088377397964 13525.270567041347 15432.900115392811 14455.683188653175 13210.633665533527 15056.891906885836 15114.98414420435 14496.821041729556 14689.118950188062 14094.368882462719 1.008949294773188 1.0259479156523497 0.9596222916990993 1.0949692209770099 1.0256353660957485 0.9372987024606116 1.068291317791516 1.0724129806912859 1.0285541099869748 1.0421977083674443 1.0 13.78283125791707 SEPLDES(ph)DNDF ddPTM_A549_MK2206_60min_R1 1 SEPLDESDNDF 11 0 J3KNW5;Q96AJ1-2;Q96AJ1 J3KNW5 CLUAP1 Clusterin-associated protein 1 1 SEPLDES(1)DNDF 62.2 0.0073866 941900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SEPLDES(ph)DNDF ddPTM_A549_PD325901_60min_R1 1 SEPLDESDNDF 11 0 J3KNW5;Q96AJ1-2;Q96AJ1 J3KNW5 CLUAP1 Clusterin-associated protein 1 1 SEPLDES(1)DNDF 53.472 0.020758000000000002 2017400.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 151.26 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 144.90306822081916 0.0 0.0 0.0 SEPQPEEGS(ph)PAGGQK ddPTM_A549_MK2206_60min_R1 2 SEPQPEEGSPAGGQK 15 0 F8WE91;Q9Y6K1-3;Q9Y6K1 F8WE91 DNMT3A DNA (cytosine-5)-methyltransferase 3A 1 SEPQPEEGS(1)PAGGQK;SEPQPEEGS(1)PAGGQK 182.35 3.2754e-33 26749000.0 4075.5 5408.0 5259.0 4487.5 5940.9 5018.7 4717.1 4210.3 7271.700000000001 7639.200000000001 7522.6 True False 4763.344763591483 5683.244100564377 6004.805278990345 5586.937701451532 5067.00147986264 5549.77550285656 5574.136010868604 4807.12291850298 5624.671560518759 5913.499414345179 5654.530806801998 0.8423943429331958 1.0050779268419299 1.0619458066736487 0.9880462044226276 0.8960958305802134 0.9814740943988801 0.9857822339854114 0.8501364804167931 0.9947194122194329 1.0457984254381743 1.0 12.465191604052654 -8.955387535421227 24.999951781040487 0.9976707034859275 0.9561292987990715 0.13957490242303738 0.06482794287857643 253.07079001415477 141816.33412495107 0.010810869097773833 0.011503591607077115 1.1081855031207726e-09 8.955387535421227 -0.041541404686855965 SEPQPEEGS(ph)PAGGQK ddPTM_A549_PD325901_60min_R1 2 SEPQPEEGSPAGGQK 15 0 F8WE91;Q9Y6K1-3;Q9Y6K1 F8WE91 DNMT3A DNA (cytosine-5)-methyltransferase 3A 1 SEPQPEEGS(1)PAGGQK;SEPQPEEGS(1)PAGGQK 202.63 9.2556e-39 28389000.0 8643.4 8703.6 9392.9 8728.3 10774.4 9678.7 9102.400000000001 9412.8 10214.900000000001 9896.400000000001 10585.8 True False 9520.871605065218 9437.082917286858 10030.358678096163 9267.427267592453 10017.64331366214 9599.879876162753 9448.7968130244 9225.054319801247 9785.603276271624 9271.539615069807 9283.813708915055 1.025534538238582 1.0165092938287443 1.080413609383848 0.9982349450520678 1.0790439821129116 1.0340448631518948 1.0177710485455902 0.9936707703368302 1.0540499392910816 0.998677903905648 1.0 13.180501858193157 -11.040579258862309 1.2959910232187508 0.9997250608480878 1.0353009259134904 0.18305834594317894 0.027265155027559537 0.6136438598012454 1.8132720699099012 0.019407160437407155 0.0042000214354938415 9.107952167199848e-12 11.040579258862309 0.03557586506540267 SEPQSPT(ph)EELSEAETESKPQTEGK ddPTM_A549_MK2206_60min_R1 1 SEPQSPTEELSEAETESKPQTEGK 24 1 E9PLV3;Q92543-2;Q92543 E9PLV3 SNX19 Sorting nexin-19 1 S(0.003)EPQS(0.07)PT(0.443)EELS(0.394)EAET(0.084)ES(0.005)KPQT(0.001)EGK 44.555 0.014822 4457200.0 542.07 659.16 564.2 636.05 780.25 991.1 695.16 376.01 938.32 697.32 1062.7 True False 633.5581636609099 692.7084285000035 644.2120438118183 791.8822785533691 665.4762585909253 1095.9775441610657 821.4615737032108 429.31056898233044 725.7920181891396 539.794927690227 798.8022609720688 0.7931351657541981 0.867183860567747 0.806472484226411 0.9913370520380367 0.8330926076512378 1.3720260916980405 1.0283666106597742 0.5374428565836794 0.9086003553694473 0.6757553828570119 1.0 9.641694606042558 -6.256473859731068 23.88641243743915 0.9537951822174628 0.8267558323562405 0.021551690906376098 0.2032610365144374 466.71879799793027 2245108.2593501173 0.025854061929456884 0.06606258805853725 5.540208895596282e-07 6.256473859731068 -0.12703934986122234 SEPQSPTEELS(ph)EAETESKPQTEGK ddPTM_A549_MK2206_60min_R1 1 SEPQSPTEELSEAETESKPQTEGK 24 1 E9PLV3;Q92543-2;Q92543 E9PLV3 SNX19 Sorting nexin-19 1 S(0.001)EPQS(0.026)PT(0.143)EELS(0.83)EAET(0.001)ESKPQTEGK 88.001 9.5217e-08 3562500.0 907.89 1017.7 938.29 528.22 1198.9 865.94 1045.1 1088.4 1312.8 808.76 1235.5 True False 1061.1196362206042 1069.4965830518438 1071.3536309609908 657.6339237126972 1022.543398173227 957.5731960355491 1234.9811420064818 1242.6840330852067 1015.4528961108167 626.0605542917855 928.6912519346862 1.142596782310631 1.1516169457005505 1.1536165854142642 0.7081297711620393 1.1010585014589342 1.0310996189968356 1.3298080922305668 1.3381024430847155 1.0934235613777832 0.6741320680985758 1.0 9.85905523488953 SEPQSPTEELS(ph)EAETESKPQTEGKK ddPTM_A549_PD325901_60min_R1 1 SEPQSPTEELSEAETESKPQTEGKK 25 2 E9PLV3;Q92543-2;Q92543 E9PLV3 SNX19 Sorting nexin-19 1 SEPQSPT(0.002)EELS(0.985)EAET(0.009)ES(0.002)KPQTEGKK 79.021 8.8475e-07 11816000.0 2753.7 3936.3 3852.1 4572.2 3385.0 4033.7 3679.5 4426.2 4837.7 4446.1 5054.5 True False 3033.2535968332045 4268.025815446053 4113.526670559067 4854.614409780397 3147.2492776160457 4000.8508845689744 3819.5253859996596 4337.9159687132715 4634.388292554919 4165.372487223828 4432.828543115413 0.6842704533528878 0.9628222192520137 0.9279688195808405 1.0951505032424627 0.709986692921839 0.9025503345448949 0.8616451885854532 0.9785887106891267 1.0454697824377952 0.9396646964144444 1.0 12.114011846402606 -8.423020361303827 3.9420538240374965 1.0212489334775192 0.8860910772316226 0.18565049394444177 0.10948209216495335 0.2389907189967639 6.66944160148842 0.016981218454174746 0.02050677550421972 3.775544893837162e-09 8.423020361303827 -0.1351578562458966 SEPRPPIS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SEPRPPISSPR 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 SEPRPPIS(0.5)S(0.5)PR 115.12 6.0136e-06 187230000.0 5954.5 6281.3 5460.7 5142.5 7918.3 6247.2 5800.8 5693.5 8322.1 7957.8 8933.6 True False 6959.474026452089 6600.991340398488 6235.109371930513 6402.4127308555935 6753.528559308582 6908.274557444262 6854.730273228588 6500.57106061248 6437.157637662879 6160.127453067872 6715.1405651830955 1.0363854574446025 0.9830012158827394 0.9285150938252185 0.953429443316653 1.0057166329956697 1.028760975349129 1.0207873099141427 0.9680469079555649 0.9586035579118757 0.9173489956423435 1.0 12.713201883952939 -5.263252869565049 7.629200096718041 0.9816204201435107 1.0369183242129307 0.1859171876287189 0.034555779390374686 0.1190457863428403 72.25168869391791 0.004311224981723768 0.03454140919425116 5.4544018405557186e-06 5.263252869565049 0.055297904069420034 SEPRPPIS(ph)SPRAPQTR ddPTM_A549_PD325901_60min_R1 1 SEPRPPISSPRAPQTR 16 2 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 SEPRPPIS(0.498)S(0.498)PRAPQT(0.005)R 89.04899999999999 2.4288999999999997e-06 10099000.0 739.83 852.24 827.55 1132.4 767.43 1315.4 1060.2 1140.4 973.79 892.11 1087.6 True False 814.9369969659401 924.0612557365404 883.7125194624116 1202.3457761330042 713.5283642897733 1304.687818519481 1100.5464911637007 1117.6538273735068 932.8649927459437 835.782022351555 953.8320948644426 0.8543820252575564 0.9687881763591387 0.9264864583823882 1.2605423770143527 0.7480649562239557 1.3678380351679207 1.1538157471206805 1.1717511220172836 0.9780180366844557 0.876236003015117 1.0 9.897591517613673 -5.612904047048309 1.766875320520588 1.038264432894697 0.8611728857853526 0.11293622489470623 0.16912455438084165 0.8911740263517631 4.364994409406537 0.022218708955429628 0.20951343410975512 2.438349487396165e-06 5.612904047048309 -0.1770915471093445 SEPRPPISS(ph)PR ddPTM_A549_MK2206_60min_R1 3 SEPRPPISSPR 11 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 SEPRPPIS(0.108)S(0.892)PR;SEPRPPIS(0.447)S(0.553)PR;S(0.003)EPRPPIS(0.27)S(0.727)PR 105.95 4.6281999999999995e-05 209552000.0 6567.4 6604.299999999999 6557.799999999999 6201.200000000001 8751.6 6644.2 6309.9 6544.799999999999 9415.6 9861.1 10536.2 True False 7675.816562485763 6940.43066075394 7487.794648899575 7720.494278382448 7464.2512331744165 7347.284833936983 7456.32715333145 7472.545442609383 7282.981633623558 7633.470661168616 7919.770755673205 0.9691968112823608 0.8763423683421986 0.9454559835000034 0.9748381003139506 0.9424832439534334 0.9277143317152039 0.9414826998610062 0.9435305229329449 0.9195950057527242 0.9638499518058017 1.0 12.951242955567983 -10.852354792251894 1.0047878941388373 1.0014622041775292 0.9362846722326166 0.25325290611105145 0.026732801609662633 0.391802319149966 0.6759292568144637 0.01883333087554801 0.004193802718377877 1.4048993376422486e-11 10.852354792251894 -0.0651775319449126 SEPS(ph)LEPESFR ddPTM_A549_MK2206_60min_R1 1 SEPSLEPESFR 11 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.451)EPS(0.537)LEPES(0.012)FR 49.5 0.028268 774470.0 156.34 135.14 247.09 113.44 300.13 122.21 256.41 382.53 551.44 191.51 302.76 True False 182.7263698539794 142.01804877039018 282.1310774644846 141.23280509251506 255.98127457980686 135.14218108356752 302.99637797520063 436.75479894899297 426.5397204687302 148.24775799052856 227.57633624908595 0.8029234184259934 0.6240457646481713 1.239720623482081 0.6205953018680004 1.1248149908680807 0.5938323083629057 1.3314054658282495 1.9191573524189167 1.8742709699038111 0.6514199166484033 1.0 7.830206741483478 -7.895822550566543 6.140716359723976 1.4695181562175603 0.8488267684760716 0.29416159800407193 0.38807774530270467 0.17544636553770573 9.113096705189951 0.060626731350793876 0.08411815530599111 1.2710933582314805e-08 7.895822550566543 -0.6206913877414887 SEPSGEINIDS(ph)SGETVGSGER ddPTM_A549_MK2206_60min_R1 1 SEPSGEINIDSSGETVGSGER 21 0 P42695;E9PKK4;G3V1A9 P42695 NCAPD3 Condensin-2 complex subunit D3 1 SEPSGEINIDS(0.5)S(0.5)GETVGSGER 125.12 2.5453e-15 2530200.0 744.23 894.07 877.34 673.44 965.48 876.9 680.65 869.36 1278.9 1193.3 1009.8 True False 869.8378293234425 939.574344118268 1001.7600044627096 838.4328302318709 823.4591709636226 969.6929759608893 804.3152945236932 992.5944423033401 989.2311919836412 923.7327012171567 759.0387909377948 1.145972827355444 1.2378475979566483 1.3197744521397015 1.104598131534206 1.0848709984192457 1.2775275618823518 1.0596497888203567 1.3076992298074601 1.3032682964219036 1.2169769348360733 1.0 9.568029806724487 -10.958034439821553 1.2373515545790013 1.00063039298588 1.212758157190727 0.0 0.1096105612426931 0.3606720325380685 0.9865602842796984 0.06402240984509575 0.015067649602341141 1.1014519602550018e-11 10.958034439821553 0.21212776420484714 SEPSGEINIDS(ph)SGETVGSGER ddPTM_A549_PD325901_60min_R1 2 SEPSGEINIDSSGETVGSGER 21 0 P42695;E9PKK4;G3V1A9 P42695 NCAPD3 Condensin-2 complex subunit D3 1 SEPSGEINIDS(0.5)S(0.5)GETVGSGER;SEPSGEINIDS(0.5)S(0.5)GETVGSGER 133.47 1.2786e-17 9398100.0 1498.1799999999998 1608.77 1444.5900000000001 1427.4 1957.78 1364.8600000000001 1383.1599999999999 1721.12 1418.15 1657.97 1843.14 True False 1650.2741306981761 1744.3466938788067 1542.628564425358 1515.567256139393 1820.2722867743405 1353.7450326778917 1435.7969106941944 1686.7909114074807 1358.5500872494697 1553.2854912490695 1616.4454646271136 1.0209278115540175 1.079124988779747 0.9543338134090507 0.9375925691925577 1.1260956998597205 0.8374826508546501 0.8882433352154001 1.0435186019694112 0.8404552562884415 0.9609266289768619 1.0 10.658609119537646 -7.269454130140495 24.9156029393119 0.9243268838644473 1.0180708910701062 0.27928773712566457 0.0757359840293576 673.8131301607172 2094693.3414221972 0.012468704007452992 0.02012876289298508 5.377072223592625e-08 7.269454130140495 0.0937440072056589 SEPSGEINIDSS(ph)GETVGSGER ddPTM_A549_MK2206_60min_R1 1 SEPSGEINIDSSGETVGSGER 21 0 P42695;E9PKK4;G3V1A9 P42695 NCAPD3 Condensin-2 complex subunit D3 1 SEPSGEINIDS(0.411)S(0.581)GET(0.007)VGS(0.001)GER 97.32 7.966199999999999e-07 2407900.0 801.52 1028.9 768.03 824.06 1107.5 993.24 688.55 870.91 1240.0 1224.7 1110.0 True False 936.796980717421 1081.2666152127756 876.9482027805575 1025.954736993459 944.5882170963793 1098.3439975406477 813.6506222644366 994.3641595500154 959.1419798731063 948.0394194089097 834.35636555848 1.1227780111563863 1.295929005694138 1.0510475367363783 1.2296361355219383 1.1321160310967546 1.3163967375085184 0.9751835736517885 1.1917739237051708 1.1495591326028902 1.1362523959103918 1.0 9.704519900798214 -11.551805809282367 0.29203765955707595 0.8612477922506618 1.1840566380702384 0.05026466430637766 0.10219045533111697 5.535760225688205 0.40115379182624994 0.6238292506662959 0.04027772965044923 2.80668834187032e-12 11.551805809282367 0.3228088458195766 SEPSLEPES(ph)FRSPTFGK ddPTM_A549_PD325901_60min_R1 1 SEPSLEPESFRSPTFGK 17 1 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPS(0.009)LEPES(0.592)FRS(0.392)PT(0.006)FGK 101.36 1.3889e-08 3023600.0 1546.7 2038.2 1848.8 1249.3 1916.0 1992.5 1697.9 2311.8 1763.6 2076.8 2550.3 True False 1703.7198453796398 2209.9662670635216 1974.2706857375454 1326.4664236338413 1781.4267698411654 1976.2737406112692 1762.5145136265296 2265.6893354279828 1689.482025084203 1945.670493571096 2236.6292676836947 0.7617354695282387 0.9880789360108008 0.8826991197258838 0.5930649494753151 0.7964783415742621 0.883594688295367 0.7880226459934644 1.0129927959739091 0.7553697206304869 0.8699119347508483 1.0 11.127110427067569 SEPSLEPESFRS(ph)PTFGK ddPTM_A549_MK2206_60min_R1 3 SEPSLEPESFRSPTFGK 17 1 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPSLEPESFRS(0.996)PT(0.004)FGK;SEPSLEPES(0.001)FRS(0.918)PT(0.081)FGK;SEPSLEPES(0.133)FRS(0.854)PT(0.013)FGK 179.95 2.0796999999999997e-31 190554600.0 19125.699999999997 22877.8 19094.6 20137.0 24479.7 19308.3 17037.7 17459.4 24488.2 26752.7 25672.6 True False 22353.650581529066 24042.182301015495 21802.50140334835 25070.565903984294 20878.768558062508 21351.49149018777 20133.229550439028 19934.323417170013 18941.661799619822 20709.24648944293 19297.384892285238 1.1583771949569017 1.2458777412180417 1.1298163727907304 1.2991690865847358 1.0819480812868836 1.1064448167131562 1.043313882311999 1.033006468412174 0.9815662539431637 1.0731633641054716 1.0 14.236117731780741 -7.484768795165567 0.9908776067943227 0.9922680431308771 1.2047810734988293 0.6477587863318681 0.05596452351505084 0.16040048614185248 0.31472807646142886 0.007941101559297298 0.015914435920764927 3.2751500724857915e-08 7.484768795165567 0.21251303036795222 SEPSLEPESFRS(ph)PTFGK ddPTM_A549_PD325901_60min_R1 1 SEPSLEPESFRSPTFGK 17 1 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPSLEPES(0.003)FRS(0.989)PT(0.008)FGK 180.8 1.7935e-32 97796000.0 10215.0 10664.0 10803.0 11937.0 12651.0 11420.0 11087.0 13083.0 13926.0 16287.0 17200.0 True False 11252.019280114453 11562.692705311252 11536.156543716314 12674.321379106026 11762.43740358069 11326.999306288933 11508.921852039199 12822.049301585048 13340.738648969502 15258.636040443183 15084.509039783386 0.7459320850575083 0.7665276128521112 0.7647684464433834 0.8402210072385643 0.7797693231220735 0.7509027490663089 0.7629629722575623 0.8500143602797147 0.8843999240402904 1.0115434317550913 1.0 13.880780120953098 -9.248614336269918 0.5509856089146086 0.9924860949155367 0.7666237749491266 0.8940975630210746 0.03006386473829126 0.170344712494683 0.11883614141218272 0.014328192114384726 0.009594200277574598 5.641384016453953e-10 9.248614336269918 -0.22586231996641015 SEPSLEPESFRSPT(ph)FGK ddPTM_A549_PD325901_60min_R1 1 SEPSLEPESFRSPTFGK 17 1 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPSLEPES(0.001)FRS(0.384)PT(0.615)FGK 149.94 4.6263999999999994e-17 109670000.0 7747.1 7619.2 8653.3 8388.4 9728.9 8868.5 8630.5 8596.0 10106.0 13246.0 11716.0 True False 8533.579888886412 8261.29672358473 9240.564974520064 8906.532416561364 9045.575626882943 8796.277876341805 8958.938400290808 8424.546036568458 9681.279964561667 12409.645299423493 10275.006273843142 0.8305182168705978 0.8040186549194944 0.8993245092261956 0.866815277693263 0.8803474553499852 0.8560849153673313 0.871915613628128 0.8199066562143752 0.9422164528704073 1.2077506298963976 1.0 13.326851654355641 -8.986633976814169 2.52851896978106 0.9779953955660105 0.8555221012009454 0.5261545024833663 0.07500186334393162 0.09266092199632527 1.1853504061550784 0.005950621762129161 0.006009173150455787 1.0312548954312226e-09 8.986633976814169 -0.12247329436506504 SEPVINNDNPLES(ph)NDEKEGQEATCSRPQIVPEPMDFR ddPTM_A549_MK2206_60min_R1 2 SEPVINNDNPLESNDEKEGQEATCSRPQIVPEPMDFR 37 2 E9PHV6;P23497-7;P23497-6;P23497-5;P23497-2;P23497-3;P23497;P23497-4;H7C4B4 E9PHV6 SP100 Nuclear autoantigen Sp-100 1 S(0.002)EPVINNDNPLES(0.92)NDEKEGQEAT(0.039)CS(0.039)RPQIVPEPMDFR;SEPVINNDNPLES(0.991)NDEKEGQEAT(0.004)CS(0.004)RPQIVPEPMDFR 74.946 3.7292000000000002e-06 17150100.0 1107.75 1658.73 1385.6200000000001 1153.67 2317.9 1465.0500000000002 1322.7 1546.5500000000002 1988.9299999999998 2104.88 1996.44 True False 1294.711118112739 1743.1522719913382 1582.1217514117902 1436.3192017902152 1976.9399805035637 1620.0806185785173 1563.0174686938785 1765.7781986107366 1538.4405306685615 1629.3861460973517 1500.6688490590739 0.8627560430300988 1.1615835652777777 1.054277732494939 0.9571193556065309 1.3173725713991558 1.0795723650786215 1.0415472205436247 1.1766607934308009 1.0251698978313375 1.0857732851048278 1.0 10.551389938816794 -8.973259633241387 23.894892965791016 1.0111042581806258 1.08643665823841 0.015731172671279436 0.1138858979848666 197.63086988729714 176602.8826884945 0.01827433749669395 0.019068233006790447 1.0635070342477443e-09 8.973259633241387 0.07533240005778419 SEPVINNDNPLES(ph)NDEKEGQEATCSRPQIVPEPMDFR ddPTM_A549_PD325901_60min_R1 4 SEPVINNDNPLESNDEKEGQEATCSRPQIVPEPMDFR 37 2 E9PHV6;P23497-7;P23497-6;P23497-5;P23497-2;P23497-3;P23497;P23497-4;H7C4B4 E9PHV6 SP100 Nuclear autoantigen Sp-100 1 SEPVINNDNPLES(0.731)NDEKEGQEAT(0.134)CS(0.134)RPQIVPEPMDFR;SEPVINNDNPLES(0.937)NDEKEGQEAT(0.031)CS(0.031)RPQIVPEPMDFR;SEPVINNDNPLES(0.876)NDEKEGQEAT(0.062)CS(0.062)RPQIVPEPMDFR;SEPVINNDNPLES(0.99)NDEKEGQEAT(0.005)CS(0.005)RPQIVPEPMDFR 102.71 1.4856e-14 48394000.0 3804.96 3693.55 4479.55 4583.17 5315.4 4174.17 4450.84 4854.95 4522.58 5064.64 4919.63 True False 4191.236738136496 4004.8184210148515 4783.559200722426 4866.262001765716 4942.064641134513 4140.176943461652 4620.2191517931 4758.114213615407 4332.511690295599 4744.85776606313 4314.546698104043 0.9714199500907631 0.9282130201012088 1.1087049313487516 1.1278732952187343 1.1454423806112062 0.9595856142386835 1.0708469452476617 1.102807443411444 1.0041638191561237 1.099734942757296 1.0 12.074993277264305 -8.943966510967911 23.565947374172882 1.0018369232164819 1.052885094996253 0.0 0.07421877371232018 88.6116517018799 37266.937089338964 0.012264401712542328 0.013055714096094604 1.1377150131771064e-09 8.943966510967911 0.05104817177977106 SEPVKEES(ph)SELEQPFAQDTSSVGPDR ddPTM_A549_MK2206_60min_R1 2 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.791)S(0.209)ELEQPFAQDTSSVGPDR;SEPVKEES(0.817)S(0.183)ELEQPFAQDTSSVGPDR 181.9 1.3025e-57 100126000.0 2268.99 2271.03 2330.71 2058.93 3285.6000000000004 2668.41 2338.0 2655.1000000000004 3346.6 2855.8 3219.0 True False 2651.9400405205374 2386.615726646583 2661.2397246236133 2563.367942428879 2802.2925924080005 2950.779375052796 2762.7843364378077 3031.4685559027316 2588.600443422043 2210.67279656076 2419.6334601195913 1.0960089964987771 0.9863542416580003 1.0998524233055036 1.059403411582093 1.1581475618499242 1.2195150313828742 1.1418193631283542 1.252862719030551 1.069831644373979 0.9136395379701423 1.0 11.240572801038423 -9.32823968115631 1.9940364870028122 1.0220638589126274 1.1236118192460354 0.35455833035089535 0.07737959710270258 0.2965122069338515 2.4163926050307114 0.016019584004834646 0.014163044384234071 4.696348520507983e-10 9.32823968115631 0.10154796033340796 SEPVKEES(ph)SELEQPFAQDTSSVGPDRK ddPTM_A549_MK2206_60min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 S(0.124)EPVKEES(0.438)S(0.438)ELEQPFAQDTSSVGPDRK 56.728 0.001173 2928400.0 724.1 588.13 761.83 908.55 996.0 605.41 872.3 684.17 885.94 1265.4 1193.6 True False 846.3103774546919 618.063304893663 869.8689495518568 1131.1447907863592 849.4897193932221 669.4740843613669 1030.7856187659117 781.1531926827508 685.2760045554671 979.5452611415319 897.1961783158571 0.9432835291868008 0.6888831225895775 0.9695415234432934 1.2607552485451412 0.9468271710517252 0.7461847258623511 1.1488965776702458 0.8706604102450229 0.7637972843818962 1.0917849237613269 1.0 9.80927966492862 SEPVKEESS(ph)ELEQPFAQDTSSVGPDR ddPTM_A549_MK2206_60min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.489)S(0.511)ELEQPFAQDTSSVGPDR 245.11 2.9550999999999995e-112 49902000.0 4154.8 4774.6 4372.3 3796.1 5545.2 5150.4 5218.9 4876.6 6800.5 6650.3 6418.6 True False 4856.028664892625 5017.606746034523 4992.357885782369 4726.144670413404 4729.508425682019 5695.411909441178 6167.10657546419 5567.872983961149 5260.19760816698 5147.992611166058 4824.684475651944 1.006496629862297 1.0399865050981412 1.0347532384711577 0.979575906831664 0.9802731037749233 1.1804734461255262 1.278240392006329 1.154038779542942 1.0902676920559011 1.0670112495740824 1.0 12.236218880867336 -7.1845829025766825 24.99999999966993 1.0811557506378338 1.0098650691414923 0.2880402671344041 0.07640736233824875 215.82527477037246 70203.04709484999 0.014077422651559413 0.024382809297009648 6.537581220497952e-08 7.1845829025766825 -0.07129068149634143 SEPVKEESS(ph)ELEQPFAQDTSSVGPDR ddPTM_A549_PD325901_60min_R1 2 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.379)S(0.621)ELEQPFAQDTSSVGPDR;SEPVKEES(0.384)S(0.616)ELEQPFAQDTSSVGPDR 230.36 4.901199999999999e-96 122277000.0 5642.5 5284.5 6006.5 5641.6 6420.9 6089.2 5812.7 6381.799999999999 6533.200000000001 6193.8 6607.4 True False 6215.322446211039 5729.843360954362 6414.137210018701 5990.068818996782 5969.918134902476 6039.611574067825 6033.905479331485 6254.509992574751 6258.632323814992 5802.722410959477 5794.731687759574 1.0725815760097908 0.9888021861405113 1.1068911479659223 1.0337094350114304 1.0302320204942284 1.0422590552079434 1.0412743513348732 1.0793441922058935 1.08005558515079 1.0013789634499872 1.0 12.500526146635806 -10.989679764943736 1.290914082853536 1.000270135609938 1.0543477603149622 0.30528662161002873 0.030179591531931872 0.43549387552858826 1.3018830573044806 0.02032641821568848 0.004756546275054111 1.024047814522427e-11 10.989679764943736 0.05407762470502431 SEPVKEESS(ph)ELEQPFAQDTSSVGPDRK ddPTM_A549_MK2206_60min_R1 2 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.367)S(0.633)ELEQPFAQDTSSVGPDRK;SEPVKEES(0.382)S(0.618)ELEQPFAQDTSSVGPDRK 259.74 9.058299999999998e-126 85743000.0 10586.9 12525.7 12076.900000000001 9794.3 14461.0 12120.8 10672.2 11241.2 18036.1 17517.7 17413.8 True False 12373.709895145794 13163.204628409629 13789.586018984306 12193.903939682841 12333.806056370859 13403.415010864132 12611.200596805636 12834.674524731181 13950.952147733318 13560.439403428967 13089.472863569605 0.9453176628360711 1.0056329055882176 1.0534867341650742 0.9315809786061519 0.9422691184683301 1.0239843231707433 0.9634613042290582 0.9805341023665228 1.065814665964232 1.0359805581758872 1.0 13.676119378098678 -8.732424361352898 24.710817302786776 1.0310791477678516 0.9819738715165875 0.2841078976766743 0.03746463726586291 199.3345914665697 169764.30891069505 0.006919927018449816 0.007845688259432299 1.8517213701033233e-09 8.732424361352898 -0.04910527625126404 SEPVKEESSELEQPFAQDT(ph)SSVGPDRK ddPTM_A549_MK2206_60min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.361)S(0.361)S(0.277)VGPDRK 99.515 1.1359000000000002e-09 8069600.0 934.79 1037.9 1089.3 850.36 1586.7 1297.1 1188.1 992.51 1943.2 1528.0 1163.9 True False 1092.5596985787479 1090.724676770667 1243.779119681343 1058.6982381741113 1353.2985318887806 1434.3582610547046 1403.9623909844997 1133.2013319343966 1503.0683026527572 1182.8237387579106 874.8715079941578 1.2488230426930806 1.2467255669022776 1.4216706205611724 1.2101185471240437 1.5468540460204558 1.63950734244769 1.6047641032491768 1.2952774454074047 1.7180446373192375 1.3519970966591466 1.0 9.77292733427179 -3.977568910151341 16.135451845444983 1.375455048392701 1.3485489690181343 0.0 0.2086919649065261 0.0 0.0 0.03624614839701197 0.0 0.000105300659175145 3.977568910151341 -0.026906079374566794 SEPVKEESSELEQPFAQDTS(ph)SVGPDRK ddPTM_A549_MK2206_60min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.001)S(0.64)S(0.359)VGPDRK 318.13 1.3756999999999994e-210 98459000.0 11965.0 12180.0 11736.0 11548.0 15430.0 11714.0 11474.0 12141.0 17978.0 17519.0 17928.0 True False 13984.399483835634 12799.909975013707 13400.34127290942 14377.260518409423 13160.267439997406 12953.567704876117 13558.677278138335 13862.023930253117 13906.011704966688 13561.445732526085 13475.982812371556 1.0377276135286644 0.9498312778540215 0.9943869370779626 1.0668802950097602 0.976571996508907 0.9612336172604912 1.0061364330096103 1.0286466021259064 1.0319107629167015 1.0063418691864219 1.0 13.718102873071139 -8.001268490291514 24.998476253843855 1.016550395471748 0.996455658717573 0.07048583723617441 0.03196227475241538 103.45116496524918 2038818.4815952277 0.0050585532662994395 0.006944890651316308 9.970834545705146e-09 8.001268490291514 -0.020094736754175058 SEPVKEESSELEQPFAQDTSS(ph)VGPDR ddPTM_A549_MK2206_60min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.006)S(0.1)S(0.895)VGPDR 232.45 2.5155999999999994e-96 56266000.0 3563.4 4046.0 3999.4 3833.1 5426.6 4802.3 3940.2 4908.7 6450.0 6414.7 6518.1 True False 4164.814803234426 4251.924118136741 4566.57505852709 4772.2096720743975 4628.354328573555 5310.476198491253 4656.083337225089 5604.523257263279 4989.085298533495 4965.6148147973645 4899.475879591643 0.850053129270952 0.8678324422103545 0.9320537891713634 0.9740245261646532 0.9446631522062549 1.0838865888924154 0.950322738932059 1.1439026122382707 1.0182895928348403 1.0134991857968354 1.0 12.258411710143648 -6.049490051207907 0.9077100947669281 1.0189275563813969 0.8297982889793756 0.6130205982665594 0.0512209966542895 0.4504165784830902 0.5253431669765759 0.007608743275716276 0.06401010151150693 8.922980600644509e-07 6.049490051207907 -0.1891292674020213 SEPVKEESSELEQPFAQDTSS(ph)VGPDR ddPTM_A549_PD325901_60min_R1 2 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDTS(0.021)S(0.978)VGPDR;SEPVKEESSELEQPFAQDTS(0.006)S(0.994)VGPDR 358.14 3.2857999999999982e-282 143594000.0 18039.6 18273.7 19318.5 19957.0 23753.0 18776.0 18902.5 22137.0 21895.0 20322.7 20800.0 True False 19870.96691194837 19813.688830555733 20629.56958157767 21189.698564364506 22084.671223401456 18623.09448116297 19621.844981344886 21695.46016885944 20974.82929191349 19039.521253706313 18241.731862063614 1.0893136168322368 1.0861736692754067 1.1308997269321734 1.1616056372603318 1.2106674624096303 1.0209060533277794 1.0756569129355213 1.1893311629022663 1.1498266420379613 1.043734300979493 1.0 14.15495508439209 -10.774490491979298 0.9883500606037545 0.9988831981401639 1.1250817336067611 0.3439428980773195 0.05321038193270721 0.43074469453564507 0.7369109344449356 0.038550244289940305 0.009421455641209425 1.6807747225518686e-11 10.774490491979298 0.1261985354665972 SEPVKEESSELEQPFAQDTSS(ph)VGPDRK ddPTM_A549_MK2206_60min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.001)S(0.251)S(0.748)VGPDRK 317.88 1.4084999999999993e-210 103410000.0 11190.0 12230.0 10769.0 13062.0 17518.0 13241.0 11968.0 12490.0 19208.0 18502.0 18704.0 True False 13078.598430766468 12852.454761446443 12296.206132239407 16262.190586375464 14941.12540595428 14642.153831335552 14142.430683698763 14260.49574902078 14857.418668873079 14322.385349802935 14059.280595861079 0.9302466325778209 0.9141616225534389 0.8745971067580297 1.1566872483619752 1.062723323862873 1.0414582546738604 1.0059142491161435 1.0143119096164093 1.056769481736282 1.0187139556784515 1.0 13.779235154092401 -6.231958270242063 24.99852833761513 1.035527568742176 0.9071177522800167 0.6677383777934534 0.04308532350791888 353.56876417071334 299808.49538841774 0.006233883342804213 0.016491164448386466 5.861944870782949e-07 6.231958270242063 -0.12840981646215943 SEPVKEESSELEQPFAQDTSS(ph)VGPDRK ddPTM_A549_PD325901_60min_R1 2 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDTS(0.052)S(0.948)VGPDRK;SEPVKEESSELEQPFAQDT(0.025)S(0.246)S(0.729)VGPDRK 332.7 4.529699999999998e-233 338960000.0 29884.0 29835.0 32280.0 32056.0 35967.0 32353.0 32704.0 34329.0 32226.0 34225.0 38258.0 True False 32917.801680561926 32349.30015594159 34470.71491540891 34036.02631554184 33440.801999414 32089.527894602972 33948.568616315475 33644.2811644205 30871.65328893374 32064.027659124946 33552.50853744377 0.9810831772481773 0.964139540262409 1.0273662512279953 1.0144107787815173 0.9966706948928987 0.9563972797679748 1.0118041868145182 1.002735194206845 0.920099707432657 0.9556372699627596 1.0 15.03413301242016 SEPVS(ph)PQDFSFSK ddPTM_A549_MK2206_60min_R1 1 SEPVSPQDFSFSK 13 0 P48552 P48552 NRIP1 Nuclear receptor-interacting protein 1 1 SEPVS(0.999)PQDFS(0.001)FSK 82.54299999999999 0.00052279 1075700.0 1303.2 1230.4 1120.4 856.05 1555.2 1392.5 1326.4 1544.8 1775.4 1998.4 1530.0 True False 1523.1482998190227 1293.0221045366895 1279.2895673285377 1065.7822884295442 1326.4321401609825 1539.8534257333085 1567.389710800304 1763.7801307515854 1373.27473473122 1546.9600520509234 1150.0587741481752 1.3244090946110012 1.124309586259541 1.1123688598229087 0.9267198445739846 1.1533603064273332 1.3389345486919537 1.3628779207056068 1.5336434714460405 1.1940909156998312 1.3451139079363355 1.0 10.16749187714076 -10.184798295980254 1.1105777362250744 1.0219699313234285 1.2230155823685749 0.0 0.18104421215638408 0.5510753508367056 1.3549188608331744 0.06281999911226223 0.030888684877077778 6.534339634910434e-11 10.184798295980254 0.20104565104514638 SEPVS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 SEPVSPSR 8 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SEPVS(1)PSR;SEPVS(0.995)PS(0.005)R 148.94 0.0007052 110170000.0 5856.4 6171.9 5272.0 5186.0 8290.9 6450.3 5793.8 6273.5 9766.099999999999 8199.7 7745.299999999999 True False 6844.8171447668155 6486.023347683671 6019.648874469876 6456.570232808383 7071.319592888821 7132.866464637387 6846.458463838054 7162.787836787979 7554.093943257042 6347.382075061024 5821.9282505946785 1.175695894924101 1.1140678944336284 1.0339613638926246 1.1090088978937311 1.2146009515260727 1.225172512888458 1.1759778151059703 1.2303119393572635 1.2975243970905055 1.090254259731331 1.0 12.507281344468165 -6.61067828648978 10.609358105235883 1.1639218066017591 1.1023755256146581 0.12999014440438883 0.08046090172303183 0.9664681315241013 109.48688288272473 0.0165095870668233 0.03438225540268095 2.450878113235949e-07 6.61067828648978 -0.06154628098710102 SEPVS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 SEPVSPSR 8 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SEPVS(1)PSR;SEPVS(1)PSR 138.08 0.0010649000000000001 113730000.0 7778.3 7510.3 7078.6 7910.799999999999 8134.3 6433.299999999999 7454.0 6816.0 6982.9 7972.6 7982.6 True False 8567.947289918182 8143.219338400142 7558.996363079721 8399.43214926966 7562.974829811583 6380.909337753815 7737.666048985309 6680.049532951437 6689.432996688865 7469.208675387576 7000.790805870627 1.2238542084036264 1.1631856406238439 1.0797346432264483 1.1997833362234134 1.0803029314159092 0.9114555076267954 1.1052560008644685 0.9541849939795048 0.9555253373775049 1.0669092796094048 1.0 12.773302182043713 -7.015496206816422 5.0380619322947 0.9828742410473593 1.1589878552385644 0.6145274277807404 0.061269706519447076 0.07641765012772156 5.55779729729001 0.007784868913258814 0.01424175721043469 9.64947739745811e-08 7.015496206816422 0.17611361419120508 SEPVS(ph)PSRER ddPTM_A549_MK2206_60min_R1 3 SEPVSPSRER 10 1 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SEPVS(0.977)PS(0.023)RER;SEPVS(0.999)PS(0.001)RER;SEPVS(0.903)PS(0.097)RER 118.76 1.7752e-05 344426000.0 6296.400000000001 6586.1 5754.500000000001 5419.700000000001 7972.7 5875.299999999999 5394.8 5812.3 9259.2 9213.3 8595.2 True False 7359.078387799643 6921.304358492432 6570.574629768001 6747.526743299582 6799.92639137183 6497.020346291498 6374.965328577713 6636.211324422222 7162.005983904082 7132.00913108525 6460.774624547967 1.1390396377298995 1.0712808851425748 1.0169948669626774 1.044383550799325 1.0524939789008028 1.0056101201248864 0.9867184198556908 1.0271541278049967 1.1085367312909755 1.1038938123591098 1.0 12.657491434100825 -5.346205500842606 3.03686328541084 1.0411824824880558 1.1461905693157044 0.37930314250146246 0.03743306043828339 0.29601741340397564 4.242586505067676 0.006064965729699776 0.06626314222434726 4.50603436122552e-06 5.346205500842606 0.10500808682764862 SEPVS(ph)PSRER ddPTM_A549_PD325901_60min_R1 3 SEPVSPSRER 10 1 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SEPVS(0.992)PS(0.008)RER;SEPVS(0.826)PS(0.174)RER;SEPVS(0.995)PS(0.005)RER 102.97 0.00010721 434140000.0 3194.3199999999997 3498.06 3642.1899999999996 4138.25 4435.06 3860.9300000000003 3382.1400000000003 3846.9799999999996 3958.25 3817.05 4090.71 True False 3518.6050148659024 3792.853792642639 3889.3709156676923 4393.860303852351 4123.5566857263875 3829.4878661672624 3510.849188478021 3770.2489660025713 3791.898517685159 3576.040811578172 3587.578603147223 0.9807743339140185 1.0572183113466385 1.084121449563703 1.2247425882175271 1.1493982827606828 1.0674296760516475 0.9786124784549973 1.0509174524274116 1.056952038446961 0.9967839613161564 1.0 11.808794725963555 -7.525148502603547 24.56905203831794 1.0263192586929897 1.1035837627418201 0.2941717256143547 0.060131323060895796 62.82703181530762 680067.4098428277 0.009677600477832341 0.014404737973049963 2.984361972049795e-08 7.525148502603547 0.07726450404883045 SEPVSPS(ph)RER ddPTM_A549_PD325901_60min_R1 1 SEPVSPSRER 10 1 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SEPVS(0.332)PS(0.668)RER 93.096 0.00050363 86514000.0 436.83 476.78 532.75 443.91 518.77 673.08 461.66 614.62 524.87 591.38 653.55 True False 481.1766600227507 516.9599238595553 568.9056186860004 471.32931250724295 482.3333848593432 667.5986596389627 479.22872393004525 602.3609219399374 502.81153918459205 554.0401658744576 573.1674931947925 0.8395044480640522 0.9019351760129652 0.9925643471421647 0.8223238723467878 0.8415225751391677 1.1647531787223624 0.8361059020616476 1.0509335038915464 0.8772506207251187 0.9666287297388051 1.0 9.162812980225237 SEQSSMSIEFGQES(ph)PEQSLAMDFSR ddPTM_A549_PD325901_60min_R1 3 SEQSSMSIEFGQESPEQSLAMDFSR 25 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SEQSSMSIEFGQES(0.961)PEQS(0.039)LAMDFSR;SEQSSMSIEFGQES(0.982)PEQS(0.018)LAMDFSR;SEQSSMSIEFGQES(0.952)PEQS(0.048)LAMDFSR 105.21 1.6684e-12 15007600.0 2381.73 1925.06 2265.19 2043.6 2067.65 2728.88 1928.16 2509.7799999999997 2189.58 2519.42 2616.12 True False 2623.5214762630453 2087.2915621986567 2418.919415094024 2169.828530647655 1922.425397005264 2706.65690603728 2001.537183929637 2459.720469015679 2097.559567069556 2360.3433912330916 2294.3538249510525 1.1434685651935204 0.9097513816305934 1.0542922319950494 0.9457253310499945 0.8378940406222116 1.1797033555166774 0.8723751158879505 1.0720754760082196 0.9142267178926969 1.0287617217381224 1.0 11.163872179128145 -8.81305339402961 24.997189730745294 0.959496019057304 0.994854513850598 0.0 0.10597291702718037 354.5531188935282 171712.07666776617 0.01668652852731747 0.01776417498043144 1.5379655445870226e-09 8.81305339402961 0.035358494793294004 SERENPEES(ph)DTETQDHSR ddPTM_A549_MK2206_60min_R1 2 SERENPEESDTETQDHSR 18 1 Q9H0X9-3;Q9H0X9-2;Q9H0X9 Q9H0X9-3 OSBPL5 Oxysterol-binding protein-related protein 5 1 S(0.067)ERENPEES(0.784)DT(0.145)ET(0.004)QDHSR;S(0.052)ERENPEES(0.388)DT(0.388)ET(0.171)QDHSR 55.126999999999995 0.0044573 4990000.0 0.0 137.08 245.26 246.18 110.62 0.0 209.846 0.0 0.0 187.59 333.54999999999995 True False 0.0 144.05678648398026 280.0415559469806 306.4941110514401 94.34794453742794 0.0 247.97230190937907 0.0 0.0 145.21328871308677 250.72032948831605 0.0 0.5745716224048498 1.11694794163084 1.2224541650728933 0.3763075165463385 0.0 0.9890394704548079 0.0 0.0 0.5791843406134879 1.0 7.9699351706409285 -5.2602431626821 24.990821038975753 0.5553548673928159 0.00011465840775660062 0.12575718441025674 0.43739435809448585 204.08791262156984 4263188.204323352 0.06888722565002453 0.5888448689564577 5.492332705238004e-06 5.2602431626821 -0.5552402089850593 SERENPEES(ph)DTETQDHSR ddPTM_A549_PD325901_60min_R1 2 SERENPEESDTETQDHSR 18 1 Q9H0X9-3;Q9H0X9-2;Q9H0X9 Q9H0X9-3 OSBPL5 Oxysterol-binding protein-related protein 5 1 S(0.019)ERENPEES(0.94)DT(0.02)ET(0.02)QDHS(0.001)R;S(0.022)ERENPEES(0.961)DT(0.017)ETQDHSR 89.02799999999999 2.8088e-06 5769100.0 322.77 474.32 437.64 188.54 247.49 90.73200000000001 312.72 194.74 147.09 381.83000000000004 379.83000000000004 True False 355.53737278928435 514.292611026185 467.34088214310884 200.18568759459242 230.10715619414938 89.99310867409874 324.62073072694994 190.85575792942538 140.90831881925357 357.7211886364848 333.11331794075124 1.0673165966078892 1.5438968763105982 1.4029486573281702 0.6009537199896589 0.6907774135739511 0.27015764254164476 0.97450541075241 0.5729454442388031 0.42300415873590513 1.073872371263494 1.0 8.379869224192234 -6.259288023877202 24.87460319943449 0.6866157037560958 1.3586383690874329 0.5524806918084406 0.25502496455781093 99.97025851151194 1155872.9374444287 0.03720256704627857 0.09341017356623724 5.504425221293035e-07 6.259288023877202 0.672022665331337 SERPPTILMTEEPS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 SERPPTILMTEEPSSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMTEEPS(0.858)S(0.142)PK 100.39 4.0712e-09 11460000.0 3805.3 4060.5 3492.4 3743.5 5074.0 4057.6 4250.5 4427.2 5949.1 5500.2 5286.0 True False 4447.541609347239 4267.1621062022305 3987.674834825229 4660.657668052103 4327.621321487154 4486.972538783104 5022.7608306368265 5054.769157731369 4601.638348760561 4257.700999945198 3973.340313821735 1.1193457539682514 1.0739483077647292 1.0036076751225234 1.1729822516937332 1.0891645264899688 1.129269628170192 1.2641154378759247 1.2721712107437049 1.1581284222630557 1.071567161044394 1.0 11.956136649202316 -4.822258368370596 16.573060619896797 1.1058589871327107 13.022986932910955 0.0 0.08771074688550017 2275.8033502066614 211949.84413776733 0.013876126658111936 1229.1313154221136 1.5057110293643318e-05 4.822258368370596 11.917127945778244 SERPPTILMTEEPS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 SERPPTILMTEEPSSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMTEEPS(0.5)S(0.5)PK 70.99 0.00025578 8527600.0 3329.7 3619.4 3035.1 4476.9 4344.0 3655.3 3675.2 4322.5 4798.6 4432.4 5523.9 True False 3667.728692804415 3924.4195402854057 3241.0801375389574 4753.427945222397 4038.8924259864434 3625.532448710853 3815.0617471466066 4236.284346564346 4596.9315295810065 4152.537507561882 4844.495318887178 0.757092008842507 0.8100780952321941 0.6690232778021264 0.981201886332775 0.8337075711973672 0.748381866440459 0.7875044759095688 0.8744531819544533 0.9488979195952575 0.8571661719586006 1.0 12.24213066364346 -8.667234737500408 1.8212702206465814 0.9801166339928297 0.7998192613892644 0.32678568189372437 0.08092342297155819 0.18198422985062257 1.1837141224555439 0.01331481832579119 0.014828262858554564 2.151618463993444e-09 8.667234737500408 -0.18029737260356526 SERPPTILMTEEPSS(ph)PK ddPTM_A549_MK2206_60min_R1 3 SERPPTILMTEEPSSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMTEEPS(0.121)S(0.879)PK;SERPPTILMTEEPS(0.285)S(0.715)PK;SERPPTILMTEEPS(0.175)S(0.825)PK 121.21 2.1972e-10 39975000.0 8504.0 8607.4 7570.200000000001 7105.599999999999 11538.7 8908.4 8167.5 8696.599999999999 12258.699999999999 10584.8 12154.2 True False 9939.267297161578 9045.479894822085 8643.768192244288 8846.4723189825 9841.37251522347 9851.080975082663 9651.429028167575 9929.369682220515 9482.124023121323 8193.686328537131 9135.97670114493 1.087926077560594 0.99009445740908 0.9461241501591223 0.9683116111574421 1.077210772000999 1.0782734345029708 1.056420057086841 1.086842710640468 1.037888376174713 0.8968593721906373 1.0 13.157343256161274 -6.745931898470575 24.999559664823554 1.03461092492938 0.9938276852547233 0.07329441078036414 0.05947058576300445 380.65536774568284 613648.624899277 0.00674998574958775 0.01401125322474815 1.7950150803011904e-07 6.745931898470575 -0.04078323967465669 SERPPTILMTEEPSS(ph)PK ddPTM_A549_PD325901_60min_R1 3 SERPPTILMTEEPSSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMTEEPS(0.043)S(0.957)PK;SERPPTILMTEEPS(0.042)S(0.958)PK;SERPPTILMTEEPS(0.031)S(0.969)PK 143.04 8.7984e-17 39607100.0 7899.4 9472.1 8273.8 10007.8 10830.3 9091.5 9397.7 9358.9 10779.1 11445.8 12675.300000000001 True False 8701.34127276907 10270.347109337838 8835.30982240118 10625.959076637122 10069.617090506667 9017.461838277215 9755.334616118767 9172.229397584984 10326.091912329968 10723.110234647545 11116.31845534688 0.7827538683532208 0.923898244782459 0.7948053897422712 0.9558883293349789 0.905841005810988 0.8111913916913627 0.8775688331802434 0.8251139470705968 0.928912926865925 0.9646278376893562 1.0 13.440391449478431 -9.351429187116594 1.0376107834790873 0.9844284960246457 0.863311847248274 0.4213834474329493 0.054288645306570925 0.2659509068855589 0.6014667827508957 0.013487049108161394 0.010650062760912715 4.452160506767082e-10 9.351429187116594 -0.12111664877637163 SERPPTILMTEEPSS(ph)PKGAVR ddPTM_A549_PD325901_60min_R1 1 SERPPTILMTEEPSSPKGAVR 21 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMTEEPS(0.197)S(0.802)PKGAVR 58.418 0.0014236 9041900.0 1687.7 1619.2 1588.1 1932.7 1735.8 1729.1 2057.9 1951.7 2185.4 1795.6 2470.0 True False 1859.0340615809273 1755.6556665828953 1695.8780160210936 2052.0784895198294 1613.8833961849136 1715.0187828812775 2136.21451062609 1912.7718124209703 2093.5552379332153 1682.2255095609867 2166.2056586200547 0.8581983221136972 0.8104750625115191 0.7828795060490353 0.9473147119498672 0.7450277815325306 0.791715586217147 0.9861549858506647 0.8830056392888705 0.9664619006059101 0.7765770082202723 1.0 11.080954502948314 -8.225854209522558 0.945439730847366 0.9879609500852701 0.8237129467266169 0.013181399298512031 0.08862161298437922 0.26308129070930564 0.4637334047049207 0.01195317553898172 0.01619597032878398 5.9449169299938035e-09 8.225854209522558 -0.1642480033586532 SES(ph)EKSTEVVPK ddPTM_A549_PD325901_60min_R1 1 SESEKSTEVVPK 12 1 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 S(0.441)ES(0.519)EKS(0.02)T(0.02)EVVPK 43.05 0.021271 6625400.0 3756.0 3120.5 3062.5 3259.2 3700.2 3739.1 3313.7 3762.8 3344.4 4265.2 3989.4 True False 4137.30635497894 3383.4754863957032 3270.3396663085414 3460.5133818197487 3440.3107169970135 3708.6500092946562 3439.804666826218 3687.7480021405054 3203.8464984642856 3995.8945440964153 3498.7290908902214 1.1825169218592568 0.9670584370780211 0.9347221752103223 0.9890772597484108 0.9833029730580415 1.059999191978314 0.9831583347743537 1.054025020611753 0.9157172262368832 1.1420988708444684 1.0 11.77261524464988 -8.759391044800235 24.999920782930612 0.9601998027923786 1.012629974147582 0.0 0.08522631622889645 89.02450185650717 1086542.6037044036 0.011296534985064137 0.01250447114396038 1.7402392320923656e-09 8.759391044800235 0.05243017135520334 SES(ph)ELIDELSEDFDR ddPTM_A549_PD325901_60min_R1 2 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;E7EQ12;H0Y9H6;E7EQA0;A0A0A0MR45;H0YD33;D6RC54;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 S(0.018)ES(0.982)ELIDELSEDFDR;S(0.005)ES(0.995)ELIDELSEDFDR 509.49 0.0 50978000.0 21613.2 22093.6 26609.8 27347.8 26435.3 23108.3 25839.4 25721.1 28987.0 35788.0 30705.0 True False 23807.35615320311 23955.505209495936 28415.7010457264 29037.011494639853 24578.575724834107 22920.113666332454 26822.732506862238 25208.07248268738 27768.777195007842 33528.339572381716 26928.47965503189 0.8840958144755282 0.8895973896922019 1.0552285687772427 1.0783011839739702 0.9127353656685673 0.8511477053272695 0.9960730368173648 0.9361119827638308 1.0312047895291754 1.2450884714583792 1.0 14.716845159108203 -8.76173099402857 24.99941553357627 1.0147355964979365 0.9530985448145002 0.20084265378028499 0.09658220705066693 11.719034022028925 1004649.0254681013 0.012074385522703917 0.013256957771926484 1.730888155183916e-09 8.76173099402857 -0.06163705168343636 SES(ph)ELIDELSEDFDRSECK ddPTM_A549_MK2206_60min_R1 1 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;E7EQ12;H0Y9H6;E7EQA0;A0A0A0MR45;H0YD33;D6RC54;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 S(0.402)ES(0.598)ELIDELSEDFDRSECK 283.64 3.772499999999999e-127 18197000.0 14697.0 17670.0 16251.0 14806.0 25413.0 20805.0 20488.0 20602.0 31243.0 25242.0 23968.0 True False 17177.4942928485 18569.32752532778 18555.636164455624 18433.470664666605 21674.781364397524 23006.5712907587 24210.404399032428 23522.396590978893 24166.510384818903 19539.81466866964 18016.08411685192 0.9534532688366493 1.0307083051393153 1.0299483530441012 1.0231674400001425 1.2030794940684877 1.2770017691712914 1.3438216785625714 1.3056331463825965 1.3413852992734414 1.0845761233093072 1.0 14.136997848019496 -6.749455342510891 6.369507506458836 1.201308161129752 1.0112554906091018 0.49457656455467647 0.10217427545329369 0.1612984224341397 25.57863739882852 0.020720086638962725 0.042038791093222505 1.7805109852346384e-07 6.749455342510891 -0.19005267052065022 SES(ph)ENWR ddPTM_A549_MK2206_60min_R1 2 SESENWR 7 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9IYH5;C9JH78;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 SES(1)ENWR;S(0.012)ES(0.988)ENWR 96.66799999999999 0.011739 22187000.0 1600.08 2111.34 1648.72 1370.1 3273.7200000000003 2189.02 1514.36 2022.6799999999998 2561.23 3285.8 2747.03 True False 1870.1343857998938 2218.798187737722 1882.53328761684 1705.7745615061267 2792.160124670661 2420.660643446125 1789.4996098066558 2309.4010841977056 1981.115494443866 2543.53549791279 2064.866636828929 0.9056925771593216 1.0745479384301495 0.9116972757659045 0.8260943012405538 1.3522229837364488 1.172308467903573 0.8666417374803626 1.1184262668625973 0.9594399265834999 1.2318158725344923 1.0 11.011832890229938 -5.229624804829687 21.50992172676526 1.0075488436881763 0.9056915587620595 0.00043453626140554924 0.15879200940935276 5229.8748818259955 3535537.9849194125 0.01891882919093826 2.4953702906007873 5.893525882700232e-06 5.229624804829687 -0.10185728492611679 SES(ph)ENWR ddPTM_A549_PD325901_60min_R1 2 SESENWR 7 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9IYH5;C9JH78;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.068)ES(0.932)ENWR;S(0.001)ES(0.999)ENWR 102.55 0.0065006 17728000.0 3605.2 3282.3 2999.5 2814.5 2866.7 2936.0 2509.0 2312.6 3793.4 3659.5 3870.8 True False 3971.197249992031 3558.9109402328504 3203.064107458767 2988.3452728067277 2665.352881578114 2912.0901894276985 2604.4813679774807 2266.473378800396 3633.9765899038425 3428.438545465824 3394.7161390228766 1.1698171768597674 1.0483677557962874 0.9435440184936128 0.8802931233204325 0.785147497588797 0.8578302485891809 0.7672162446923017 0.6676473925895818 1.0704802525697579 1.009933792712534 1.0 11.72907522822033 -5.459305566705644 2.5244720233300137 0.9489078888371119 1.1773105261247983 0.23473448459469992 0.12556754891838934 0.5152915964567861 5.306315780387299 0.021478192866301666 0.20578830610771134 3.4729172331674575e-06 5.459305566705644 0.2284026372876864 SES(ph)ETSTMAAK ddPTM_A549_MK2206_60min_R1 2 SESETSTMAAK 11 0 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.005)ES(0.975)ET(0.016)S(0.003)T(0.001)MAAK;S(0.002)ES(0.949)ET(0.045)S(0.003)TMAAK 108.72 0.00011519 9611900.0 3505.3 4098.5 3892.4 4454.1 5133.5 4645.2 4587.8 4316.8 5777.8 6635.700000000001 6917.099999999999 True False 4096.908943643048 4307.096143891108 4444.40084958015 5545.354699952149 4378.368950306331 5136.751980765797 5421.343874554907 4928.71961964555 4469.13752525067 5136.6907613061985 5199.393167751858 0.7879590581941877 0.8283843912026053 0.854792224051378 1.0665388288668078 0.8420922998211104 0.9879522119283882 1.0426878098351269 0.9479413194245236 0.8595498322707263 0.9879404375813398 1.0 12.344127537730765 -6.017625440059029 21.43433806967901 0.9461300012986532 0.8165256112037924 0.462382050472655 0.06708258904419025 89.15958267660714 108430.62010677611 0.01015988388626432 0.02766580069582123 9.602284293963272e-07 6.017625440059029 -0.1296043900948608 SES(ph)LDPDSSMDTTLILK ddPTM_A549_MK2206_60min_R1 2 SESLDPDSSMDTTLILK 17 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.088)ES(0.888)LDPDS(0.011)S(0.011)MDT(0.002)TLILK;S(0.083)ES(0.915)LDPDS(0.001)S(0.001)MDTTLILK 112.72 2.9354999999999996e-09 4423600.0 1234.3600000000001 2202.3999999999996 1761.25 1374.17 2883.3 1931.23 1482.65 1975.8899999999999 2956.7 2841.5 2304.5 True False 1442.6897907954328 2314.4927527890145 2011.0217337177685 1710.8417116888368 2459.170389484413 2135.5914767532763 1752.0283132675438 2255.978458409341 2287.012170879688 2199.603176492542 1732.2290490355997 0.8328516321779935 1.3361355151488679 1.160944469114742 0.9876532855983046 1.4196565926737752 1.2328574433861645 1.011429934305147 1.3023557477374792 1.3202712263444363 1.2698108126735017 1.0 10.758413991897394 -5.242949551119316 23.885659769613202 1.175513723723063 0.8328510793871099 0.33950652698848205 0.14392591666161864 2236.812249658943 2889491.4671758525 0.021408498678588333 0.9463578800549256 5.715450251095175e-06 5.242949551119316 -0.34266264433595317 SES(ph)LDPDSSMDTTLILK ddPTM_A549_PD325901_60min_R1 2 SESLDPDSSMDTTLILK 17 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.108)ES(0.891)LDPDSSMDTTLILK;S(0.096)ES(0.883)LDPDS(0.009)S(0.009)MDT(0.002)T(0.001)LILK 96.67299999999999 7.765699999999999e-07 4070500.0 1881.1 1792.1 1775.0 1941.3 2346.4 2034.3 2246.3 2109.9 1865.4 1681.5 2201.0 True False 2072.067887207371 1943.1265563754973 1895.462173942094 2061.2096919878127 2181.59695864056 2017.7333352700166 2331.784175722524 2067.8163893154697 1787.0037251032395 1575.3298030334156 1930.2909532885603 1.0734484786748189 1.0066495691051494 0.981956720417132 1.06782331879876 1.1301907388230046 1.045300104542522 1.2079962203366057 1.0712459620621506 0.9257691033876484 0.8161100275321648 1.0 10.914602606367833 -8.74730048602689 24.542780484883007 0.9649465239447899 1.0731250244626833 0.4419659256930184 0.07379287598071607 144.8895796047823 251504.00142825392 0.010802832433800362 0.012218389263102042 1.7893673719304593e-09 8.74730048602689 0.10817850051789346 SES(ph)LELPQAAPPQIYHEK ddPTM_A549_PD325901_60min_R1 1 SESLELPQAAPPQIYHEK 18 0 B0QY58;B0QY55;B0QY57;B0QY56;H0YGT9;Q15040 B0QY58 JOSD1 Josephin-1 1 S(0.028)ES(0.972)LELPQAAPPQIYHEK 120.64 9.2928e-11 10013000.0 4073.6 3587.9 3762.0 4030.8 3928.0 5072.6 4883.5 4395.5 5268.7 4912.3 3867.0 True False 4487.148873174178 3890.264924736145 4017.3119427437528 4279.773361389006 3652.110830864351 5031.290427415169 5069.344264853737 4307.828304296956 5047.274861397791 4602.1365396616375 3391.383514932695 1.3231027553848418 1.1471026227516916 1.1845643304730988 1.261954993454623 1.076879336938344 1.4835510066206767 1.494771748029312 1.2702274117123697 1.4882642553323724 1.3570085834874888 1.0 11.727658225559082 -4.870606434592618 17.23734505776801 1.2543645786790216 13.011700551661045 0.0 0.1619359223975909 900.3565226874365 119972.3025851541 0.027178960084815407 103.22116107089035 1.3470805495170938e-05 4.870606434592618 11.757335972982023 SES(ph)LESPRGER ddPTM_A549_MK2206_60min_R1 2 SESLESPRGER 11 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;Q5VY93 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.181)ES(0.819)LESPRGER;S(0.135)ES(0.862)LES(0.003)PRGER 53.754 0.0056394 20997500.0 1333.44 1510.7199999999998 1492.77 1103.71 1678.3400000000001 1084.5 1176.8799999999999 1015.2 1826.93 2238.67 2108.14 True False 1558.4920725220052 1587.6091951931614 1704.4672326142636 1374.1189995474242 1431.458409283555 1199.261070167162 1390.7038622185319 1159.1077089196083 1413.13327200772 1732.9528921761598 1584.6306562959041 0.983504936200718 1.0018796423541494 1.0756242950634813 0.8671541182722328 0.9033388339397703 0.7568079447424367 0.8776201928778288 0.7314686891322918 0.8917745383715714 1.093600508920458 1.0 10.62993090267756 -6.267177506288497 24.944759962478923 0.9058990477031567 1.0184906269233858 0.2515702692749805 0.09724011528100417 525.8527804871463 2285988.511399456 0.013505993365224433 0.032187482540077667 5.405333491975767e-07 6.267177506288497 0.11259157922022911 SES(ph)LIDAS(ph)EDSQLEAAIR ddPTM_A549_PD325901_60min_R1 1 SESLIDASEDSQLEAAIR 18 0 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 2 S(0.452)ES(0.548)LIDAS(0.617)EDS(0.383)QLEAAIR 52.887 0.0044659 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SES(ph)LIDASEDSQLEAAIR ddPTM_A549_PD325901_60min_R1 4 SESLIDASEDSQLEAAIR 18 0 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 S(0.106)ES(0.894)LIDASEDSQLEAAIR;S(0.123)ES(0.876)LIDAS(0.001)EDSQLEAAIR;S(0.005)ES(0.994)LIDAS(0.001)EDSQLEAAIR;SES(1)LIDASEDSQLEAAIR 153.72 2.7789e-18 6530560.0 3590.56 4486.24 4549.6900000000005 4084.3999999999996 4348.65 4808.9800000000005 4354.71 4741.22 4290.79 5285.6 5285.5 True False 3955.0710079694327 4864.3111892606485 4858.459322908514 4336.684111654575 4043.21582602807 4769.817261292239 4520.430872038747 4646.652647684861 4110.463017924159 4951.866313953859 4635.417007545063 0.8532287389746743 1.0493794153455913 1.048116990337742 0.9355542564122622 0.8722442488878416 1.0289942099121638 0.9751940040520296 1.002423868256407 0.8867515071963458 1.0682677105196172 1.0 12.178483415887323 SES(ph)LKGR ddPTM_A549_MK2206_60min_R1 1 SESLKGR 7 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SES(1)LKGR 67.563 0.019459999999999998 7381000.0 3032.9 3156.6 2620.6 2431.9 2768.9 2413.6 2266.9 3026.7 3496.9 4256.2 4160.5 True False 3544.7793727141748 3317.2574570712854 2992.2404856668745 3027.7156091721395 2361.5984779396517 2669.0055499819846 2678.7663867711167 3455.74399388 2704.8577334018255 3294.7214639407225 3127.333026041492 1.1334831766225668 1.0607304784774378 0.9568026368635212 0.9681462076344821 0.7551477435484094 0.8534446212657921 0.856565758895796 1.1050131102456342 0.8649087611963008 1.0535243405500396 1.0 11.610717143015572 -5.646644752743394 1.8543027258837492 0.9245053210509913 1.1402556132541113 0.31758984982222094 0.09469594207765361 0.3761855331251414 2.141463104858789 0.013094454694558326 0.10794312511044872 2.256083904971691e-06 5.646644752743394 0.21575029220312003 SES(ph)LKGR ddPTM_A549_PD325901_60min_R1 2 SESLKGR 7 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SES(1)LKGR;S(0.003)ES(0.997)LKGR 91.265 0.0034645 280100000.0 14008.6 15700.1 15377.0 14763.3 18998.1 12903.8 13683.5 14199.0 15533.8 16577.300000000003 18023.7 True False 15430.742759413737 17023.202526505742 16420.57568941273 15675.195511113012 17663.738995886983 12798.715731041246 14204.233080398502 13915.789806099981 14880.968406244614 15530.606448900291 15806.899161647885 0.9762030238576576 1.0769476259966888 1.0388233341333513 0.9916679641472994 1.117470214445622 0.8096917428368643 0.8986097105536097 0.8803617751838209 0.9414223658964151 0.9825207518614428 1.0 13.94826676161171 -7.234238170592945 24.996133968666783 0.9477200582275296 1.0394875098613974 0.44577717088781443 0.0630738255784465 730.7756998507485 671535.5860624762 0.009985787361946188 0.017292892009784566 5.831252259977288e-08 7.234238170592945 0.09176745163386779 SES(ph)LKGREEMKR ddPTM_A549_PD325901_60min_R1 1 SESLKGREEMKR 12 3 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.002)ES(0.998)LKGREEMKR 60.474 0.002561 42202000.0 4380.6 4368.4 4348.3 4384.6 5117.1 5472.7 5098.1 5632.8 5592.6 5998.8 6113.6 True False 4825.315287172724 4736.540398901133 4643.401786452063 4655.42678385091 4757.692549036657 5428.132145667902 5292.110985287366 5520.449385153882 5357.562470790383 5620.034744238387 5361.665957303469 0.899965668431815 0.8834083355098218 0.8660371279055509 0.8682799004867983 0.8873534059979805 1.012396555267285 0.9870273581812089 1.0296145692616534 0.9992346620349414 1.0481881543893978 1.0 12.388465623946423 -7.242056401251992 7.400540177492358 1.0018988639406834 0.8793465981101621 0.9200044221737403 0.019195677482865423 0.026607879309554102 7.395370892068055 0.0018835603353902803 0.0032146030786221426 5.7272164755033765e-08 7.242056401251992 -0.12255226583052126 SES(ph)LRVSDR ddPTM_A549_PD325901_60min_R1 2 SESLRVSDR 9 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 S(0.001)ES(0.999)LRVSDR;S(0.012)ES(0.988)LRVSDR 99.589 0.00022357 32777000.0 3327.1000000000004 3408.8 3536.8999999999996 4538.0 4420.6 7028.799999999999 5416.8 6373.4 5273.2 5402.6 5579.2 True False 3664.8647427184346 3696.0715391846393 3776.9353031074907 4818.301953454227 4110.112306242095 6971.559783191208 5622.939288186697 6246.277537164423 5051.585742046966 5061.478913986519 4892.993769462759 0.749002536155044 0.7553803894564249 0.7719068286330949 0.9847349456125033 0.8399994972185254 1.424804549456165 1.1491817797274826 1.27657582074752 1.0324120528364418 1.0344339585256124 1.0 12.256501730365617 -6.499539728452411 1.6225854677289575 1.0702522279380733 0.7497259883016214 0.5281486794512347 0.1438070333294039 0.2809932220911169 1.442858026509938 0.022752852385670423 0.06843728237129498 3.165630864155813e-07 6.499539728452411 -0.3205262396364519 SES(ph)LSNCSIGKK ddPTM_A549_MK2206_60min_R1 2 SESLSNCSIGKK 12 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.015)ES(0.984)LS(0.002)NCSIGKK;S(0.039)ES(0.957)LS(0.004)NCSIGKK 81.311 0.00031158 15356500.0 5593.4 6149.8 6613.9 6111.7 9032.9 6378.8 6291.5 6181.4 10455.4 9241.8 9693.900000000001 True False 6537.429174499473 6462.798552080404 7551.850472468949 7609.066774364638 7704.172375810276 7053.800382095253 7434.584111504909 7057.632379743563 8087.268593842957 7154.0709612911405 7286.6370919705805 0.8971805638163746 0.8869384423168275 1.0363972264778518 1.0442494498249892 1.0573015066579607 0.9680460674881285 1.020303881978335 0.9685719613401131 1.1098766813506635 0.9818069530558178 1.0 12.831037424300055 -5.763243534338818 24.334818688631646 1.0386810659698977 0.8920594435956226 0.5415610274905871 0.04314606356446039 16.473608863006486 222224.54142487646 0.0068013329431368475 0.0228727580750716 1.7248703849510007e-06 5.763243534338818 -0.14662162237427512 SES(ph)LSNCSIGKK ddPTM_A549_PD325901_60min_R1 2 SESLSNCSIGKK 12 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.032)ES(0.96)LS(0.009)NCSIGKK;S(0.005)ES(0.99)LS(0.005)NCSIGKK 87.51899999999999 0.00011719999999999999 23265000.0 5662.5 7541.200000000001 7227.299999999999 9249.1 8065.4 8765.0 6600.3 9059.4 7527.0 8252.2 7534.099999999999 True False 6237.352831487821 8176.7233898437 7717.7880392854595 9820.395900769843 7498.914128119489 8693.620746026489 6851.478028322749 8878.703160038183 7210.666365847584 7731.154683670736 6607.453462594883 0.9439874025292468 1.2374999591192781 1.1680427388518488 1.4862603204643945 1.1349174338602925 1.3157293948782993 1.0369317116055832 1.343740551530322 1.091292796334854 1.1700657034419055 1.0 12.689878643421098 -8.961774003407795 5.853219362103932 1.039248552743582 1.213440040703263 0.10514304881235226 0.1456599843260735 0.18565131931352638 14.929107660891738 0.02337073623523936 0.02433566323142245 1.0920084440267573e-09 8.961774003407795 0.1741914879596811 SES(ph)LTAESR ddPTM_A549_MK2206_60min_R1 1 SESLTAESR 9 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 S(0.002)ES(0.845)LT(0.153)AESR 110.84 0.00034508 5426400.0 1539.3 1664.1 1323.4 1391.6 2045.7 1574.2 1681.3 1444.3 2490.5 2242.8 2503.2 True False 1799.0962077282222 1748.7955820542136 1511.0780198166603 1732.5420624712967 1744.7802399224026 1740.7807991306104 1986.7704469002936 1649.0339479832435 1926.4057265112663 1736.1499223077521 1881.5863551945831 0.9561592550676048 0.929426160657592 0.8030872543505414 0.9207879604824871 0.9272921410731464 0.9251665725172569 1.05590181466576 0.8764062002419812 1.023819991675082 0.9227054169024357 1.0 10.877733787914305 -7.628329718908505 0.8584571228788784 1.0072760984999256 0.8963452628958247 0.11516617148082553 0.06231278887713198 0.41713689859728786 0.618126483305241 0.010341546364069703 0.020029184163847198 2.3532619952635404e-08 7.628329718908505 -0.11093083560410089 SES(ph)PCESPYPNEKDKEK ddPTM_A549_MK2206_60min_R1 1 SESPCESPYPNEKDKEK 17 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594;B7ZB98 A0A0C4DG98 THOC2 THO complex subunit 2 1 S(0.148)ES(0.85)PCES(0.002)PYPNEKDKEK 76.704 8.7394e-05 19675000.0 2250.4 2764.5 1871.7 1848.8 3576.7 2952.0 2542.0 3051.6 3875.1 3213.5 3432.2 True False 2630.2125030024004 2905.201241865798 2137.1352045419717 2301.756082995785 3050.5721680258384 3264.3786806209905 3003.8484958190375 3484.1736451330517 2997.3960372631213 2487.568118127322 2579.8900160989324 1.0195056714005044 1.126094997746753 0.8283822919604716 0.8921915541486085 1.1824427200344871 1.2653169942325981 1.164331997517156 1.3505124727764528 1.1618309379697909 0.9642147931130759 1.0 11.333093847748284 -6.765845930581371 24.999681792981526 1.1265563654798014 0.9680714849394841 0.3327862789942173 0.12448603940271902 126.73173860532202 718992.585333642 0.01970170140241137 0.038161826987158774 1.7145654553496964e-07 6.765845930581371 -0.15848488054031729 SES(ph)PCESPYPNEKDKEK ddPTM_A549_PD325901_60min_R1 1 SESPCESPYPNEKDKEK 17 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594;B7ZB98 A0A0C4DG98 THOC2 THO complex subunit 2 1 S(0.02)ES(0.98)PCESPYPNEKDKEK 161.8 4.2583999999999996e-23 33376000.0 7501.2 7904.2 8804.9 8207.1 7191.3 8059.0 8200.0 8649.1 6426.3 7800.8 7918.8 True False 8262.716301908422 8570.314673792316 9402.453462164922 8714.033927323535 6686.207896638193 7993.370175952931 8512.055487212177 8476.586915412305 6156.22495906023 7308.256156707147 6944.837801409107 1.1897637552070572 1.2340554119281808 1.353876610373415 1.2547498122354217 0.9627594031471206 1.1509801099071137 1.2256665642335207 1.2205593791826796 0.8864461827763828 1.0523292790544803 1.0 12.761725284724003 -8.756162755164612 24.99681825545013 0.9463773595017736 1.1986440561995702 0.49125365810827937 0.0978843137241097 68.63220705495685 325129.2061874788 0.017363049231119677 0.01940376836568874 1.7532233449113922e-09 8.756162755164612 0.25226669669779656 SES(ph)PFRETEPLVS(ph)PHQDK ddPTM_A549_MK2206_60min_R1 3 SESPFRETEPLVSPHQDK 18 1 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 2 S(0.464)ES(0.503)PFRET(0.056)EPLVS(0.977)PHQDK;S(0.459)ES(0.528)PFRET(0.018)EPLVS(0.996)PHQDK;S(0.463)ES(0.507)PFRET(0.045)EPLVS(0.985)PHQDK 50.028999999999996 0.021862 9676500.0 1982.66 2111.64 1924.08 1470.07 2566.24 1929.0 1782.59 2038.4499999999998 2998.13 2310.7099999999996 2529.09 True False 2317.2845366169295 2219.113456456319 2196.943476174129 1830.2372159939491 2188.7494954775725 2133.1254996334314 2106.4635287812966 2327.4065299913073 2319.058342029801 1788.7190061422075 1901.047153666934 1.2189516352327792 1.1673111065003654 1.1556491231353414 0.9627521402946795 1.1513388772370474 1.122079215930463 1.1080543292774903 1.2242760656946188 1.2198847027842337 0.9409124874635242 1.0 10.892578601770987 -10.97701353749625 1.2732605771836183 1.0007471165875403 1.1511546656943787 0.4563378584075053 0.07247017818577062 0.3990913747556848 1.1602118222352018 0.05122163708548497 0.012054283183021307 1.0543540303595977e-11 10.97701353749625 0.1504075491068384 SES(ph)PGVR ddPTM_A549_PD325901_60min_R1 1 SESPGVR 7 0 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 S(0.11)ES(0.89)PGVR 54.157 0.043148 87682000.0 592.2 671.19 758.95 450.47 616.87 673.15 660.87 478.5 789.14 576.42 885.52 True False 652.3197080454019 727.7535368415101 810.4569109370996 478.2945088084017 573.5431792859712 667.6680895821709 686.0197694919398 468.9559421240117 755.9751901082723 540.0247428275472 776.6066537737781 0.8399615234759752 0.9370941303491604 1.0435873900884474 0.6158774284049936 0.7385246784829139 0.8597249152292988 0.8833555135773715 0.6038525936459673 0.9734338309294016 0.6953645583686358 1.0 9.601040257728442 -8.959364806359348 24.998046034005707 0.9882798856237931 0.8194182086762528 0.0 0.15094007801424167 139.1689565243704 85614.62808172504 0.021244375694191138 0.02258985562273054 1.0980830646903279e-09 8.959364806359348 -0.16886167694754028 SES(ph)PIPVAEQGTLMR ddPTM_A549_MK2206_60min_R1 3 SESPIPVAEQGTLMR 15 0 P86452 P86452 ZBED6 Zinc finger BED domain-containing protein 6 1 S(0.106)ES(0.726)PIPVAEQGT(0.168)LMR;S(0.011)ES(0.984)PIPVAEQGT(0.004)LMR;S(0.004)ES(0.996)PIPVAEQGTLMR 110.97 2.4793e-06 8836700.0 2197.8900000000003 2831.96 2177.6400000000003 1842.46 3591.59 2802.83 1957.76 2749.9300000000003 3688.01 3076.3900000000003 3415.9 True False 2568.8400987486425 2976.0946677208412 2486.4620969272733 2293.862782711172 3063.271868750502 3099.4236102320237 2313.4596503440907 3139.7409988074232 2852.681623541786 2381.4313623543535 2567.637755956047 1.0004682680762917 1.1590788696019574 0.9683850812520287 0.8933747672895797 1.1930311671281326 1.2071109341815893 0.9010070228861725 1.2228130668059742 1.1110140505312847 0.927479492319445 1.0 11.326225965101669 -4.898591776884807 11.854180279157388 1.0633030346964338 5.226957365598591e-05 0.017062455098042828 0.12101211393463415 434247.32173317013 1133747.4676836473 0.014975439261378131 11593196.941919379 1.2630141702874096e-05 4.898591776884807 -1.0632507651227778 SES(ph)PIPVAEQGTLMR ddPTM_A549_PD325901_60min_R1 4 SESPIPVAEQGTLMR 15 0 P86452 P86452 ZBED6 Zinc finger BED domain-containing protein 6 1 S(0.013)ES(0.754)PIPVAEQGT(0.233)LMR;S(0.109)ES(0.718)PIPVAEQGT(0.174)LMR;S(0.036)ES(0.957)PIPVAEQGT(0.007)LMR;S(0.038)ES(0.962)PIPVAEQGTLMR 72.66199999999999 0.00037007 32237180.0 6574.49 8508.37 7842.83 7635.0 8365.65 7651.48 7641.959999999999 8802.16 7602.4400000000005 8162.38 9770.68 True False 7241.927384916264 9225.40020002711 8375.091606568043 8106.596609656905 7778.075603925759 7589.168883720107 7932.778969640972 8626.594013639058 7282.935884997252 7647.005933799512 8568.948301443645 0.8451360808999382 1.076608222560156 0.9773768392507466 0.946043356136383 0.9077048116412788 0.8856593150925569 0.9257587618196396 1.0067272797276303 0.8499217907255044 0.8924089240346088 1.0 13.064902432593952 -6.409265780472638 3.996935318403335 0.9286983402539384 0.9769483018051394 0.06426123847546639 0.06629165059789922 0.5039817175736264 13.915107154294327 0.010234721432305445 0.024741246383709215 3.8970342214554644e-07 6.409265780472638 0.04824996155120098 SES(ph)PKEPEQLR ddPTM_A549_MK2206_60min_R1 9 SESPKEPEQLR 11 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.001)ES(0.999)PKEPEQLR;S(0.001)ES(0.999)PKEPEQLR;SES(1)PKEPEQLR;S(0.013)ES(0.987)PKEPEQLR;S(0.061)ES(0.939)PKEPEQLR;S(0.002)ES(0.998)PKEPEQLR;S(0.016)ES(0.984)PKEPEQLR;S(0.142)ES(0.858)PKEPEQLR;S(0.032)ES(0.968)PKEPEQLR 220.37 4.7187999999999995e-32 13159999000.0 54082.9 54624.5 50579.0 46842.7 69705.29999999999 54641.7 52186.799999999996 53202.09999999999 75671.20000000001 73448.0 72783.5 True False 63210.77132004461 57404.653729896265 57751.86275072307 58319.16360284871 59451.742708052494 60423.84842577509 61668.46604311919 60743.66059959797 58531.794022075694 56856.04578814862 54709.34822759067 1.1553925127582958 1.0492659040844927 1.0556123335718706 1.0659816922007774 1.0866834395601548 1.1044519882491035 1.1272016216785954 1.110297646883026 1.0698682385793312 1.039238222170509 1.0 15.739499748020375 -10.023076992330656 0.8027471905410306 1.0051208365449782 1.0908270925069183 0.4207791599909503 0.03191965157198206 0.33370981432832997 0.4330475148112885 0.014406442094376972 0.006450690398128545 9.482503412576192e-11 10.023076992330656 0.08570625596194015 SES(ph)PKEPEQLR ddPTM_A549_PD325901_60min_R1 8 SESPKEPEQLR 11 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.318)ES(0.682)PKEPEQLR;SES(1)PKEPEQLR;S(0.09)ES(0.91)PKEPEQLR;SES(1)PKEPEQLR;S(0.433)ES(0.567)PKEPEQLR;S(0.015)ES(0.985)PKEPEQLR;S(0.018)ES(0.982)PKEPEQLR;S(0.002)ES(0.998)PKEPEQLR 187.47 7.254999999999999e-19 15280964000.0 105781.7 103625.8 109899.9 101694.0 120562.09999999999 104218.90000000001 107899.09999999999 109181.1 114194.8 113631.90000000001 118614.6 True False 116520.5803116281 112358.70984077682 117358.36809578523 107975.40741616886 112094.23401266585 103370.17583206613 112005.25929515307 107003.39730958389 109395.58967911404 106457.16244145851 104025.75615990063 1.1201127933405393 1.0801047162595714 1.1281664505797075 1.037968012942844 1.0775623090916346 0.9936979037496562 1.0767069947848968 1.0286240759942782 1.0516202305798124 1.023373118074917 1.0 16.666581249761794 -2.0000000000000058 0.14573823821465046 0.9980752152821105 1.4177781431537202 0.5505408001002814 0.028564304564895174 34.32282903741596 0.3149566525647861 0.05338583580718374 3.051648550320946 0.009999999999999867 2.0000000000000058 0.4197029278716097 SES(ph)PKEPEQLRK ddPTM_A549_MK2206_60min_R1 5 SESPKEPEQLRK 12 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.143)ES(0.857)PKEPEQLRK;S(0.005)ES(0.995)PKEPEQLRK;S(0.024)ES(0.976)PKEPEQLRK;S(0.082)ES(0.918)PKEPEQLRK;S(0.019)ES(0.981)PKEPEQLRK 148.7 1.5553e-12 14906390000.0 60475.4 67419.6 61012.6 54968.2 78780.90000000001 58901.5 57340.2 53951.9 85974.3 84976.59999999999 89338.29999999999 True False 70682.16903842485 70850.96966760558 69665.10411959045 68435.41146761618 67192.33397042732 65134.41763434868 67758.17211642921 61599.747045764154 66501.25832274547 65780.32704118818 67153.13449835424 1.0525520449109804 1.0550657120754647 1.0374065877937206 1.0190948193087452 1.0005837325743008 0.9699386055604742 1.0090098194610677 0.9173026323480673 0.990292691763707 0.9795570606283509 1.0 16.03516712126755 -6.442341326895875 1.4787299342100195 0.9882643512175067 1.0536595331239684 0.6120019656805292 0.023613131072605646 0.2399024025491046 1.0037628657457311 0.0035756666055013686 0.011937094352862986 3.611259298511586e-07 6.442341326895875 0.06539518190646176 SES(ph)PKEPEQLRK ddPTM_A549_PD325901_60min_R1 9 SESPKEPEQLRK 12 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.065)ES(0.935)PKEPEQLRK;SES(1)PKEPEQLRK;S(0.038)ES(0.962)PKEPEQLRK;S(0.025)ES(0.975)PKEPEQLRK;S(0.022)ES(0.978)PKEPEQLRK;S(0.231)ES(0.769)PKEPEQLRK;S(0.181)ES(0.819)PKEPEQLRK;S(0.049)ES(0.951)PKEPEQLRK;S(0.059)ES(0.941)PKEPEQLRK 154.69 3.3346e-14 22256552400.0 99385.40000000001 98746.60000000002 102682.29999999999 109560.59999999999 119083.0 106463.0 111521.4 110616.1 120413.40000000001 112189.0 125175.69999999998 True False 109474.93264433565 107068.32253322289 109650.93835683035 116327.9094318241 110719.02089404773 105596.00062569503 115765.4079038515 108409.7751088482 115352.84354687821 105105.36739370551 109779.88245414013 0.9972221703741406 0.9753000289278869 0.998825430539483 1.0596468754684572 1.0085547408041717 0.9618884468181783 1.0545229719316906 0.987519504351225 1.0507648666418108 0.9574192014426016 1.0 16.744254174109507 -7.777275957729391 24.999951518715264 1.0233503239784871 1.0021199942666423 0.0 0.03519138897970923 461.36010379852024 728311.2380947236 0.004916779746478555 0.006805352911642376 1.6700291136226463e-08 7.777275957729391 -0.021230329711844798 SES(ph)PNRER ddPTM_A549_MK2206_60min_R1 2 SESPNRER 8 1 Q9NRU3;Q9NRU3-2 Q9NRU3 CNNM1 Metal transporter CNNM1 1 S(0.034)ES(0.966)PNRER;S(0.159)ES(0.841)PNRER 70.942 0.0017733 39862000.0 3399.0 2391.55 1986.9 1300.53 437.84000000000003 433.4 239.63 205.302 412.99 5084.7 4813.7 True False 3972.668102428524 2513.2696798640422 2268.6722967913884 1619.1599083830101 373.434316003141 479.2621003323633 283.16766917903857 234.40418721100605 319.4484244095114 3936.062738522482 3618.3254386386084 1.0979300148090705 0.6945947020204069 0.626995093521763 0.44748874468080396 0.10320639266313351 0.132454116817277 0.0782593146971269 0.06478250538436929 0.08828626109698512 1.0878133560046557 1.0 11.821106457020129 -10.913195772652724 1.199386747382068 0.9955828449682003 0.33546381075386955 0.3895505885732963 0.31942425657872975 0.4422993806352953 1.1422828103499085 0.23624770927664468 0.057623354224539756 1.221249017533895e-11 10.913195772652724 -0.6601190342143307 SES(ph)PNRER ddPTM_A549_PD325901_60min_R1 3 SESPNRER 8 1 Q9NRU3;Q9NRU3-2 Q9NRU3 CNNM1 Metal transporter CNNM1 1 SES(1)PNRER;S(0.013)ES(0.987)PNRER;S(0.001)ES(0.999)PNRER 93.561 0.00071299 95424000.0 6048.25 6032.34 3285.87 4056.7 5055.280000000001 3890.869 2717.8 3251.12 3695.6099999999997 5663.66 6933.43 True False 6662.263887513679 6540.70646229907 3508.8688977414695 4307.27314556584 4700.214572569234 3859.1830528775063 2821.2273662372245 3186.273861145699 3540.296363529956 5306.055541033735 6080.662064634026 1.0956477792545536 1.0756569585310005 0.5770537583644941 0.7083559487078781 0.7729774361095207 0.6346649446814435 0.46396713651394544 0.5240011412042629 0.5822221866465513 0.8726114828670531 1.0 12.570012698028881 -5.743803574032849 23.65133834179167 0.7271171348829676 1.0856531473155908 0.4877949174470452 0.1539934117067023 116.34079939902895 156019.02263988578 0.02771468199661704 0.10674116006656706 1.8038334076970155e-06 5.743803574032849 0.35853601243262323 SES(ph)PPAELPSLR ddPTM_A549_MK2206_60min_R1 2 SESPPAELPSLR 12 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.021)ES(0.979)PPAELPSLR;S(0.001)ES(0.999)PPAELPSLR 288.2 6.620299999999999e-94 398390000.0 16308.9 16691.8 14847.1 14895.400000000001 20668.9 15814.7 13692.9 17132.1 21711.0 22260.0 20613.6 True False 19061.443605677134 17541.34132355779 16952.64203416953 18544.77366867993 17628.532189926278 17488.20105705176 16180.722686231502 19560.6276398558 16793.493165342745 17231.45053975858 15494.674213582237 1.2301932485271847 1.1320884248202843 1.0940947709187248 1.1968482468914416 1.1377155754893868 1.1286588421279646 1.0442764051178237 1.2624097396452165 1.0838235727874805 1.1120885991041962 1.0 13.919484801115049 -9.614711009241331 0.748841822643342 1.008094243553966 1.149143910047027 0.15758697076650374 0.06783748237274956 0.3622355672640539 0.4349435204066386 0.022160431964937555 0.01300990339880051 2.4282253614379476e-10 9.614711009241331 0.14104966649306117 SES(ph)PPAELPSLR ddPTM_A549_PD325901_60min_R1 2 SESPPAELPSLR 12 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.001)ES(0.999)PPAELPSLR;S(0.001)ES(0.999)PPAELPSLR 306.96 5.214799999999999e-129 506120000.0 26148.9 25478.5 23313.3 25032.7 29262.0 25555.0 23195.3 25889.5 27728.0 26379.0 27753.0 True False 28803.517078197237 27625.662611803516 24895.480732261523 26578.913025613427 27206.73806841973 25346.888552733246 24078.00983445518 25373.11361258015 26562.688586717406 24713.425438131708 24339.556940762108 1.1834035084656458 1.1350109075131962 1.022840341459478 1.092004800674946 1.117799232526533 1.0413866043010886 0.9892542371685942 1.0424640709086663 1.0913382134015825 1.0153605301148054 1.0 14.571015286089873 -2.0000000000000004 0.4614968344356012 1.0405603955613039 4.531505582845106 0.5610842948621442 0.03913238180608337 52.45080615324866 0.5456176193173794 0.008926401553102127 175.3110819117414 0.00999999999999999 2.0000000000000004 3.4909451872838018 SES(ph)PPAELPSLRR ddPTM_A549_MK2206_60min_R1 2 SESPPAELPSLRR 13 1 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.028)ES(0.972)PPAELPSLRR;S(0.046)ES(0.954)PPAELPSLRR 121.82 3.5083e-06 50915000.0 1941.02 2427.8999999999996 2803.9 2419.0 3419.3 2681.34 2243.67 1706.3400000000001 4046.8999999999996 3783.3 4525.6 True False 2268.6167226171856 2551.4697396006386 3201.5351819283196 3011.6551085930355 2916.325499519321 2965.077619070559 2651.3157964651054 1948.2189204470872 3130.2836115713485 2928.6499023840347 3401.768619794103 0.6668933064455445 0.7500421177249469 0.9411384311382405 0.885320386304028 0.8572968433390499 0.8716282470881352 0.7793933370534708 0.5727076524578576 0.9201929823671586 0.8609197831219031 1.0 11.732069300317157 -8.979743774327746 21.519026174636434 0.9647918757019314 0.7984681251829285 0.24022069675657998 0.10432860083870599 23.951416491141114 25445.80491082458 0.018566112007992897 0.01899176061606022 1.0477465167087495e-09 8.979743774327746 -0.16632375051900283 SES(ph)PPAELPSLRR ddPTM_A549_PD325901_60min_R1 3 SESPPAELPSLRR 13 1 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.152)ES(0.848)PPAELPSLRR;S(0.039)ES(0.681)PPAELPS(0.28)LRR;SES(1)PPAELPSLRR 162.79 3.9843000000000007e-19 78856300.0 5239.3 6099.3 5722.6 6215.799999999999 5598.7 7277.8 6056.0 6779.9 7711.7 7773.4 7059.2 True False 5771.189879031195 6613.309416495212 6110.970048789312 6599.73584889396 5205.466626466461 7218.532009746904 6286.46439397036 6644.6695757713405 7387.604067159137 7282.586197383254 6190.963151955749 0.9321958049787543 1.068219799435576 0.987079053581321 1.0660273186748137 0.8408169292401675 1.1659788360178727 1.0154259102615466 1.0732852728532658 1.1932883278146091 1.176325237064714 1.0 12.595948157180295 -7.292816606773635 24.998440020177515 1.0902493940505 0.989130074584839 0.35321385193751365 0.08268407311169326 769.9712943606952 613439.428825254 0.013494631770687807 0.021573892921907038 5.095459959562209e-08 7.292816606773635 -0.101119319465661 SES(ph)PPPLSDPK ddPTM_A549_MK2206_60min_R1 2 SESPPPLSDPK 11 0 Q15059;Q15059-2 Q15059 BRD3 Bromodomain-containing protein 3 1 S(0.012)ES(0.988)PPPLSDPK;S(0.001)ES(0.999)PPPLSDPK 191.33 3.8220999999999996e-19 352870000.0 42877.0 56004.0 39983.0 47865.0 55020.0 51399.0 40368.0 47907.0 59931.0 59899.0 54142.0 True False 50113.589357995836 58854.36438757537 45653.19061986516 59591.92714874146 46926.6308845533 56838.008064105095 47702.34306814432 54697.96395903431 46356.72419014123 46367.7742983378 40697.0471568173 1.2313814603033464 1.446158099893409 1.1217814020744659 1.4642813499248928 1.1530721308534164 1.396612580885588 1.1721327811409417 1.34402782954418 1.1390684933851731 1.1393400145143104 1.0 15.312636500656202 -9.253540423066068 0.6707358911972047 1.0157138323187884 1.3039269237734328 0.32701553030067854 0.1191868864102233 0.3269425783112466 0.32477903878414943 0.03532236105083589 0.025501137066870936 5.577756833313132e-10 9.253540423066068 0.28821309145464435 SES(ph)PPPLSDPK ddPTM_A549_PD325901_60min_R1 2 SESPPPLSDPK 11 0 Q15059;Q15059-2 Q15059 BRD3 Bromodomain-containing protein 3 1 SES(1)PPPLSDPK;S(0.004)ES(0.996)PPPLSDPK 173.72 3.1378e-15 487480000.0 57105.0 63232.0 59923.0 66372.0 74448.0 65526.0 62453.0 63802.0 71833.0 68012.0 75417.0 True False 62902.25756152084 68560.7825527234 63989.73512627158 70471.6476982512 69219.02931165721 64992.377981076024 64829.683090592924 62529.41905829924 68814.10881598646 63717.7107129995 66141.1871077526 0.9510300663192646 1.036582280282163 0.9674718269272061 1.0654729795436497 1.0465344264065053 0.9826309569435907 0.9801711448719076 0.9453930567715798 1.040412363689199 0.9633590429696258 1.0 16.01326131892635 SES(ph)PSKDFGPTLGLK ddPTM_A549_MK2206_60min_R1 1 SESPSKDFGPTLGLK 15 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 S(0.107)ES(0.786)PS(0.107)KDFGPTLGLK 95.814 5.2022e-06 4295200.0 2228.8 2589.7 2649.9 2713.4 3938.5 2609.0 3048.7 2103.2 3977.9 3745.1 3830.8 True False 2604.966951071696 2721.5046684969616 3025.695666247671 3378.1831218091556 3359.151867299401 2885.0826482859625 3602.6093269880034 2401.335040779864 3076.912001400991 2899.079308915088 2879.5066352985805 0.9046573878797757 0.9451288061417384 1.0507687772471244 1.1731812250048406 1.1665720183176747 1.0019364473479686 1.251120342222946 0.8339397490330374 1.0685552739078654 1.0067972316425928 1.0 11.491605931127896 -5.689406103592801 4.041163600889674 1.0516718266310359 0.9149898668826641 0.19772472114240813 0.1056580053488652 0.2637457604200039 8.18464351617995 0.01383712449082488 0.05928576667355997 2.044531925156814e-06 5.689406103592801 -0.13668195974837172 SES(ph)PVCSSR ddPTM_A549_MK2206_60min_R1 2 SESPVCSSR 9 0 O00472;D6RC27 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 S(0.195)ES(0.805)PVCSSR;S(0.019)ES(0.967)PVCS(0.011)S(0.003)R 112.13 0.0002917 30546000.0 1275.89 1278.84 1301.8600000000001 1071.74 1474.76 1443.23 1123.58 1085.3600000000001 1662.07 1708.01 2205.8 True False 1491.229039484417 1343.9274936327201 1486.483323922108 1334.316348112236 1257.8247576027586 1595.9516406614607 1327.7199421449068 1239.213103775596 1285.6137987803975 1322.1693547355371 1658.038983017022 0.8993932318593184 0.8105524100448264 0.8965309857897636 0.8047557155045114 0.758621944650529 0.9625537499470699 0.8007772770993261 0.7473968443858198 0.7753821303049537 0.7974295950084808 1.0 10.69526221184809 -10.842404488850029 1.097050046398382 0.9996877094048005 0.8247678406688423 0.0 0.08601719307004994 0.3291912003937767 0.7053828462537765 0.04368101139951011 0.010787708792775826 1.4374591482785243e-11 10.842404488850029 -0.1749198687359581 SES(ph)PVCSSR ddPTM_A549_PD325901_60min_R1 1 SESPVCSSR 9 0 O00472;D6RC27 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 S(0.002)ES(0.994)PVCS(0.003)S(0.002)R 82.029 0.0015458 19076000.0 660.78 595.66 850.95 786.31 708.13 588.57 738.68 798.03 621.25 813.2 804.43 True False 727.8618991594744 645.8583586689517 908.7005841780427 834.8785828604224 658.3933917158797 583.776881059762 766.7908716212062 782.1126656075762 595.1410229550701 761.8544132184197 705.4902097019153 1.0317108432546662 0.9154745874387692 1.2880413812715956 1.1834020818136888 0.9332424215979765 0.8274769416097499 1.0868908754172388 1.1086088153342843 0.843585091289261 1.07989367214652 1.0 9.462482252026748 -6.777353953626709 24.9447674196547 0.9437723971854622 1.1042430441975857 0.1348666989130619 0.1257558786788221 241.1675067359267 378009.737055857 0.018464340107207242 0.034973177597983435 1.6697292163663772e-07 6.777353953626709 0.16047064701212344 SES(ph)QERPGSR ddPTM_A549_PD325901_60min_R1 1 SESQERPGSR 10 1 A0A3B3ISF0;Q659C4-9;Q659C4;G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;A0A3B3ISF8;Q659C4-3 A0A3B3ISF0 LARP1B La-related protein 1B 1 S(0.001)ES(0.999)QERPGSR 64.73 0.0049082 8929500.0 266.97 377.92 350.71 296.2 369.07 389.43 427.0 302.25 415.49 528.81 319.84 True False 294.07259786707345 409.76864471035515 374.51128959055336 314.49560128099233 343.1477964223793 386.2586111951048 443.2497186633656 296.22138663946197 398.0284002053956 495.42084635272084 280.501707632809 1.0483807758205503 1.4608418899423001 1.3351479844850276 1.1211896139066757 1.2233358553081513 1.3770276639482601 1.5802032807714743 1.0560412952181768 1.4189874406270462 1.7661954735806884 1.0 8.131865743446177 -10.936613621539983 1.1212311790177827 0.9951568598689706 1.305544058431914 0.0 0.2786267882555558 0.4763939544061767 1.0361612457797251 0.11820814254018905 0.025974982427676235 1.1571412574145987e-11 10.936613621539983 0.3103871985629434 SES(ph)SERR ddPTM_A549_MK2206_60min_R1 2 SESSERR 7 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 S(0.002)ES(0.867)S(0.131)ERR;SES(0.722)S(0.278)ERR 65.24600000000001 0.020229 15016800.0 2846.2 2393.07 1805.76 1151.48 0.0 0.0 0.0 194.996 49.791000000000004 3599.4 3381.7 True False 3326.568977090929 2514.867041371598 2061.8439210096217 1433.5926516919008 0.0 0.0 0.0 222.63728015020476 38.51341799988856 2786.293040108133 2541.9305598280275 1.3086781478861427 0.9893531637393508 0.8111330630326559 0.5639778970944389 0.0 0.0 0.0 0.08758590170349387 0.01515124709090958 1.0961326340467135 1.0 11.311708904163064 -11.032228466220682 1.3640154177026336 0.9956822133529662 0.36077042000350656 0.21922830559345619 0.4411858978719108 0.5939543521536296 1.990928867992948 0.33932914126149305 0.07852246975451525 9.284778205350629e-12 11.032228466220682 -0.6349117933494597 SES(ph)SERR ddPTM_A549_PD325901_60min_R1 3 SESSERR 7 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 S(0.001)ES(0.972)S(0.028)ERR;S(0.001)ES(0.939)S(0.061)ERR;SES(0.563)S(0.437)ERR 73.57300000000001 0.010131 84764000.0 4819.900000000001 5355.299999999999 4235.1 4075.3 4639.1 3473.3700000000003 2003.4299999999998 2758.83 3893.5 5299.6 6145.5 True False 5309.212699777158 5806.609925426982 4522.519353725161 4327.022025322175 4313.265620026178 3445.0840263121536 2079.6716249689616 2703.802971389732 3729.8697350109715 4964.982351564605 5389.642459534233 0.9850769767454991 1.0773645875442326 0.8391130557695643 0.8028402733223442 0.8002878952380313 0.6392045580347966 0.38586448740955714 0.50166648190303 0.6920440016225682 0.9212081114548873 1.0 12.395973854677733 -5.896288041722749 3.7530064737310243 0.7719939097394497 1.0311336194958924 0.2931215526599811 0.17253599086136634 0.29296849878410225 7.786115823575831 0.02980622252218651 0.10436668016880372 1.2697316882993491e-06 5.896288041722749 0.25913970975644274 SES(ph)SQGGAAGGPEAGAR ddPTM_A549_MK2206_60min_R1 1 SESSQGGAAGGPEAGAR 17 0 Q6ZN16 Q6ZN16 MAP3K15 Mitogen-activated protein kinase kinase kinase 15 1 S(0.001)ES(0.973)S(0.026)QGGAAGGPEAGAR 83.10600000000001 0.00016055 2590400.0 267.32 316.29 0.0 319.78 241.55 153.44 140.93 181.12 277.32 279.81 263.85 True False 312.43708065348426 332.38781001618116 0.0 398.12611435546967 206.01831497935018 169.67691895477122 166.53515677253225 206.79431465673704 214.5074627890401 216.60072666351522 198.32876311045487 1.5753493126938893 1.6759435434539822 0.0 2.0074048166868366 1.038771743181864 0.8555335912636806 0.8396924085075049 1.0426844367580081 1.081575155438119 1.0921296702832972 1.0 7.6317501128665 SES(ph)SQGGAAGGPEAGAR ddPTM_A549_PD325901_60min_R1 2 SESSQGGAAGGPEAGAR 17 0 Q6ZN16 Q6ZN16 MAP3K15 Mitogen-activated protein kinase kinase kinase 15 1 S(0.001)ES(0.83)S(0.169)QGGAAGGPEAGAR;S(0.002)ES(0.738)S(0.26)QGGAAGGPEAGAR 112.16 3.6193999999999997e-09 5829700.0 961.26 1008.25 950.44 995.99 1278.71 955.74 983.3500000000001 1208.29 752.47 1378.55 1248.42 True False 1058.8464075577895 1093.2187659536828 1014.9425738600132 1057.510040242591 1188.8978209100192 947.9567703145874 1020.7719223597675 1184.189708064832 720.8463026849117 1291.5081177351858 1094.8722543864171 0.9670958445752038 0.9984897887163457 0.9269963411656662 0.9658752754084864 1.085878116051352 0.8658149537690465 0.9323205682400121 1.0815779679506718 0.6583839345612834 1.179597083185715 1.0 10.096546836027903 -8.740425218392456 24.999920474113996 0.8386812447985355 0.9749173615764356 0.0 0.1398558370208256 298.4751500187432 355086.7908800208 0.022130493704321377 0.025081272284002306 1.8179200586462643e-09 8.740425218392456 0.13623611677790015 SES(ph)TENQSYAK ddPTM_A549_MK2206_60min_R1 1 SESTENQSYAK 11 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 S(0.001)ES(0.499)T(0.499)ENQSYAK 188.15 7.8774e-19 9511600.0 2687.9 3873.4 2851.4 3047.4 4710.2 3283.9 2945.9 3656.0 4982.5 5222.6 4897.6 True False 3141.5518071543506 4070.539515370946 3255.7713961804634 3794.013136802986 4017.3358195642104 3631.400118323603 3481.1318976527537 4174.249196030426 3853.971705417541 4042.8110327467734 3681.3907531164036 0.8533600527178312 1.10570699726051 0.8843862590311443 1.030592347088188 1.0912549329797223 0.9864207202806488 0.9456023908100152 1.1338783291333048 1.046879281194218 1.0981749300381702 1.0 11.846035174200374 SES(ph)TENQSYAK ddPTM_A549_PD325901_60min_R1 1 SESTENQSYAK 11 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 SES(0.5)T(0.5)ENQSYAK 220.53 4.6121999999999994e-32 14381000.0 3362.9 3600.6 4141.6 3450.0 5169.1 3731.2 4790.0 4011.9 5111.8 3988.3 4983.8 True False 3704.2991323638657 3904.0351983068003 4422.6738814639875 3663.09866448151 4806.040248426914 3700.814344275416 4972.286071188578 3931.8795072253333 4896.968822763341 3736.4780573524645 4370.824194911188 0.8475058632366554 0.8932034381186378 1.011862679494903 0.8380796163676268 1.09957299449894 0.8467085792615856 1.1376083432908723 0.8995739320293632 1.120376524973191 0.8548680730976843 1.0 12.093689635279242 -6.499411968731858 0.5006844652084927 1.0509854073748905 0.8476969168632513 0.0032041057474955226 0.11285363244965092 1.551333689847242 0.5218804358488711 0.02033331099244261 0.1493599796105264 3.1665622589256864e-07 6.499411968731858 -0.20328849051163922 SES(ph)TQPLLDSEERPEDLQLVDHVDGGDGILPR ddPTM_A549_MK2206_60min_R1 1 SESTQPLLDSEERPEDLQLVDHVDGGDGILPR 32 1 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 S(0.114)ES(0.772)T(0.114)QPLLDSEERPEDLQLVDHVDGGDGILPR 140.39 7.6607e-32 6173900.0 493.46 1415.0 835.33 1033.8 930.66 799.23 610.56 912.88 1818.7 878.25 1870.6 True False 576.7439840613063 1487.0174560463377 953.7923547630733 1287.081046409046 793.7611468378476 883.8039881140633 721.4908487833487 1042.2835355777502 1406.7673538671108 679.8527150288849 1406.0783940663891 0.41017910985272904 1.0575636908450545 0.6783351190005122 0.915369336333231 0.5645212601142988 0.6285595396698299 0.5131227759618664 0.7412698608954927 1.000489986762921 0.4835098227082103 1.0 10.457461316894669 -8.725208042460885 4.8407649910312385 1.0009076851159258 0.6938408739432018 0.0 0.2304076964419594 0.1357281661854562 7.376738285437276 0.027465124780093317 0.030626620217739757 1.882746970855178e-09 8.725208042460885 -0.30706681117272394 SES(ph)TQPLLDSEERPEDLQLVDHVDGGDGILPR ddPTM_A549_PD325901_60min_R1 1 SESTQPLLDSEERPEDLQLVDHVDGGDGILPR 32 1 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 S(0.083)ES(0.458)T(0.458)QPLLDSEERPEDLQLVDHVDGGDGILPR 150.33 1.0250999999999999e-40 26985000.0 537.66 677.77 654.83 777.97 774.65 680.52 763.01 549.1 740.82 853.67 659.33 True False 592.2428473956277 734.8880565340216 699.2707016126766 826.0234400019363 720.2412563974215 674.978070745687 792.0467630850932 538.1477697393831 709.6859116709456 799.7691305117659 578.2365898372312 1.0242223646939035 1.2709124075681313 1.209315899240336 1.4285215680219319 1.2455822911520755 1.1673043225017767 1.3697624415432579 0.9306705580338096 1.2273279210343924 1.3831174722735795 1.0 9.175516092789822 -11.55254670210503 0.3257731423895474 0.8317347819108512 1.238261558196294 0.0 0.17439011209270094 5.432493154993415 0.4738327573583253 0.847521546296016 0.04860096487114343 2.8019043010872046e-12 11.55254670210503 0.40652677628544276 SES(ph)VEGFLSPSR ddPTM_A549_MK2206_60min_R1 1 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.195)ES(0.801)VEGFLS(0.002)PS(0.001)R 110.38 8.3229e-05 3992600.0 809.45 860.02 742.88 651.76 992.03 978.87 660.68 798.87 1411.5 1154.4 1085.7 True False 946.0653708475351 903.7913445575771 848.2315546028424 811.4412292586183 846.1037011341948 1082.453373678682 780.7170040195597 912.1122689367684 1091.797503702329 893.6202382343805 816.0907262043613 1.1592649450235588 1.107464299663239 1.0393838912347013 0.994302720523038 1.036776517568609 1.326388523875493 0.9566546695741479 1.117660377270801 1.3378383905675295 1.0950010942908381 1.0 9.672585737767077 SES(ph)VVYADIR ddPTM_A549_MK2206_60min_R1 2 SESVVYADIR 10 0 O95297-4;O95297-2;O95297;O95297-5 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 S(0.004)ES(0.996)VVYADIR;S(0.017)ES(0.983)VVYADIR 111.63 0.00015544 20225700.0 1046.8600000000001 1604.5 1362.8899999999999 1220.8700000000001 1995.0700000000002 1804.34 1652.75 1496.3000000000002 2281.69 2181.1099999999997 2162.69 True False 1223.5443747303104 1686.1621966263947 1556.168295623341 1519.983204806937 1701.5978458532475 1995.274061176042 1953.03328145748 1708.4051072265665 1764.8908581102155 1688.3957361533166 1625.634385792494 0.7526565539113118 1.0372333480165612 0.9572683188936801 0.9350092604407773 1.0467285022540425 1.2273818015994717 1.2013976196162826 1.0509159514325368 1.0856628486299116 1.0386072975014162 1.0 10.666787108424938 -4.4463222770409265 0.8303953519347117 1.0619812087641496 7.591447263675386e-13 0.5258981111026804 0.0841791198341698 5.512398990367604 1.0410492745824793 0.01429468902440972 7.432852921442774 3.578308029402576e-05 4.4463222770409265 -1.0619812087633904 SES(ph)VVYADIR ddPTM_A549_PD325901_60min_R1 2 SESVVYADIR 10 0 O95297-4;O95297-2;O95297;O95297-5 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 S(0.028)ES(0.972)VVYADIR;S(0.002)ES(0.997)VVY(0.001)ADIR 169.65 2.0423e-10 36262000.0 4165.9 4570.4 4979.1 5079.799999999999 5380.2 4808.299999999999 5288.3 4658.7 5372.799999999999 6186.5 6141.799999999999 True False 4588.819101226509 4955.563647820197 5317.011667760613 5393.567708937154 5002.3133126823805 4769.142798986782 5489.549150368799 4565.778573820553 5146.999900415293 5795.883334205308 5386.397536077998 0.8519272984384605 0.9200144650720481 0.9871183164902628 1.0013311629546706 0.9286936731232651 0.8854049050489025 1.0191503901447847 0.8476497590901984 0.9555551490473506 1.07602220136642 1.0 12.395104994665747 -9.810321320562986 1.0539973771686872 0.9929790815787474 0.93529369584168 0.26143858317480684 0.05952874207337608 0.5869435964423988 1.3341533986327385 0.016573848610515536 0.010204976951490237 1.5476711229637978e-10 9.810321320562986 -0.057685385737067385 SES(ph)WER ddPTM_A549_MK2206_60min_R1 1 SESWER 6 0 H0Y8X4;O43598;O43598-2 H0Y8X4 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 1 S(0.001)ES(0.999)WER 69.905 0.051502 40018000.0 1815.1 1442.0 809.63 789.87 2027.2 1720.5 1567.8 1194.4 2540.6 2056.5 2068.0 True False 2121.444505065612 1515.3916407200138 924.4477083150692 983.3881854586123 1729.0015654156023 1902.5621680245317 1852.6489660680916 1363.7098576965923 1965.1581565045253 1591.9352216987209 1554.4585261035454 1.364748219036304 0.9748678496547233 0.5947072197753123 0.6326242668716315 1.112285426970877 1.223938841773768 1.1918291385438244 0.8772893163736637 1.2642075188911295 1.0241091640374065 1.0 10.60219640987568 -6.941984177671956 24.868911314147525 1.120805139588583 0.8759570131207581 0.17201184091247113 0.21458239129520437 91.991789738697 39432.24207581867 0.03210906937756382 0.060680440283269764 1.1429199731851167e-07 6.941984177671956 -0.24484812646782483 SES(ph)WER ddPTM_A549_PD325901_60min_R1 2 SESWER 6 0 H0Y8X4;O43598;O43598-2 H0Y8X4 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 1 S(0.009)ES(0.991)WER;S(0.001)ES(0.999)WER 69.905 0.051502 86823000.0 7070.3 5959.3 5563.8 6023.9 4584.3 5560.9 4887.7 4088.6 7730.2 7198.3 8809.9 True False 7788.0716511202345 6461.511125165166 5941.392925847338 6395.982621730485 4262.314582976441 5515.61387411052 5073.704098152062 4007.049665555349 7405.326576494624 6743.798109530434 7726.338150557414 1.0079900076025492 0.8362967034647587 0.7689791476986674 0.8278155184379354 0.5516603726008209 0.7138716642517902 0.6566764228130529 0.5186220933478379 0.9584523007138082 0.8728323790803674 1.0 12.91556910453798 -8.91258657660029 11.22174219894496 0.9816961517931023 0.7333846864785195 0.31968230837110256 0.13272858704615548 0.3072024997460143 37.56394500646377 0.02279440859928322 0.024249177078298725 1.2229632970276885e-09 8.91258657660029 -0.2483114653145828 SESDGNPT(ph)TEDESSRSPEDLER ddPTM_A549_MK2206_60min_R1 2 SESDGNPTTEDESSRSPEDLER 22 1 Q8N196 Q8N196 SIX5 Homeobox protein SIX5 1 S(0.005)ES(0.021)DGNPT(0.481)T(0.481)EDES(0.003)S(0.003)RS(0.004)PEDLER;SESDGNPT(0.412)T(0.412)EDES(0.059)S(0.059)RS(0.059)PEDLER 48.097 0.0052091 12052200.0 251.85 182.84 136.05 137.25 318.73 0.0 0.0 189.93 552.83 596.0 481.98 True False 294.3561228586715 192.1457750272173 155.34393576851798 170.87625616138666 271.8452392190779 0.0 0.0 216.85315913623046 427.61488768810415 461.3631860600232 362.2910640287173 0.8124851868699116 0.5303629984425636 0.4287821345662683 0.4716546255964017 0.7503503845668406 0.0 0.0 0.598560606835838 1.1803075762702468 1.273460021148777 1.0 8.501005411683938 -8.65060804952857 4.80300520447873 1.084357177750732 0.4216658866066291 0.6112854862743358 0.2501391523551952 0.10915206236182126 4.181828409502618 0.0435293283490402 0.04926623610965232 2.2355889301281085e-09 8.65060804952857 -0.6626912911441027 SESDGNPT(ph)TEDESSRSPEDLER ddPTM_A549_PD325901_60min_R1 1 SESDGNPTTEDESSRSPEDLER 22 1 Q8N196 Q8N196 SIX5 Homeobox protein SIX5 1 S(0.008)ES(0.008)DGNPT(0.481)T(0.481)EDES(0.007)S(0.007)RS(0.007)PEDLER 47.047 0.005617199999999999 7260400.0 134.74 142.36 190.83 159.49 246.89 130.1 226.56 181.78 204.47 195.43 210.31 True False 148.41870560965458 154.35717681246348 203.7808713540112 169.34133507192934 229.54929812426164 129.04050873451754 235.18186477838898 178.15425529634877 195.8768369635785 183.09051644770759 184.44320326493275 0.8046851441658553 0.8368818914446311 1.104843484318053 0.9181218503817069 1.2445527623728094 0.6996219239868914 1.275090979853433 0.9659030646981847 1.0619899974423161 0.9926661064583542 1.0 7.527032816451034 -5.699203781970125 7.3721329442489685 1.0306539953231475 0.8169350701851441 0.22773100269635194 0.14809302353602743 0.21466612790561365 21.088099334252952 0.017081911076824795 0.06667975514916848 1.9989237039165203e-06 5.699203781970125 -0.2137189251380034 SESDGNPTTEDES(ph)SRSPEDLER ddPTM_A549_MK2206_60min_R1 1 SESDGNPTTEDESSRSPEDLER 22 1 Q8N196 Q8N196 SIX5 Homeobox protein SIX5 1 SESDGNPT(0.006)T(0.006)EDES(0.329)S(0.329)RS(0.329)PEDLER 56.303000000000004 0.0014203 2328000.0 300.81 230.47 281.78 230.17 428.63 0.0 221.98 296.05 441.43 196.77 338.65 True False 351.579373901596 242.1999385830386 321.74064109410494 286.561660332724 365.5790948027277 0.0 262.31089264433894 338.0159941151003 341.44680981885887 152.31952033729993 254.55385873547678 1.3811590822001432 0.9514683446017766 1.2639393592082462 1.1257407833306843 1.436156169931112 0.0 1.0304730556723676 1.3278761351103867 1.3413538946729466 0.5983783592751776 1.0 7.991827125092984 -8.037659016202168 23.841648345292533 1.1782464082130264 1.0117988445935782 0.0 0.4087066345361543 936.4244416689305 592841.5916143805 0.05996303916719336 0.07742553010921296 9.16940137811395e-09 8.037659016202168 -0.16644756361944824 SESDGNPTTEDESSRS(ph)PEDLER ddPTM_A549_MK2206_60min_R1 1 SESDGNPTTEDESSRSPEDLER 22 1 Q8N196 Q8N196 SIX5 Homeobox protein SIX5 1 SESDGNPT(0.028)T(0.028)EDES(0.116)S(0.116)RS(0.712)PEDLER 61.37 0.00039418 2545800.0 345.28 267.06 404.17 403.8 336.82 278.98 248.3 213.74 448.16 381.74 391.35 True False 403.55482271448136 280.6522132945126 461.4873834587428 502.7310181272709 287.27422418275614 308.50147842806365 293.4128959527408 244.03829955129734 346.65247556446064 295.5046688700557 294.1669942894694 1.37185622639014 0.9540574528845412 1.5687938906042767 1.7089987248282792 0.9765685129857548 1.0487290702793417 0.9974364957613615 0.8295910292068869 1.1784207008055563 1.0045473306202053 1.0 8.200491574211991 -6.796758549516426 24.999930951984894 1.0508519553671183 1.380998490520079 0.48671264207838427 0.19153682392329116 136.780690690292 96816.96944048295 0.028577668994904392 0.054008208574416953 1.5967666393432602e-07 6.796758549516426 0.33014653515296066 SESDGNPTTEDESSRS(ph)PEDLER ddPTM_A549_PD325901_60min_R1 2 SESDGNPTTEDESSRSPEDLER 22 1 Q8N196 Q8N196 SIX5 Homeobox protein SIX5 1 S(0.002)ES(0.002)DGNPT(0.008)T(0.008)EDES(0.089)S(0.089)RS(0.802)PEDLER;SESDGNPT(0.001)T(0.001)EDES(0.133)S(0.133)RS(0.731)PEDLER 74.274 5.7651999999999996e-05 5569000.0 698.68 731.06 660.05 944.78 1101.3899999999999 1052.48 859.2 749.47 980.77 756.36 789.56 True False 769.6094792589689 792.6689918552926 704.8449622030869 1003.1369148489395 1024.0321659892286 1043.9089518286319 891.8973261722807 734.5212329021588 939.551647619548 708.6033005187945 692.4491254332189 1.1114310799042109 1.1447324615499699 1.0179014404301727 1.4486795895963391 1.4788554543246197 1.507560502983563 1.2880330025895843 1.0607584094248341 1.356852963070368 1.0233290425133674 1.0 9.435564269338899 -10.900598745166473 0.9665195497175079 0.9871894580993443 1.277352182740743 0.2698827071234825 0.16213483493040556 0.7112230313553788 1.0893853304274423 0.15268499961962614 0.03038296393780303 1.2571909754274993e-11 10.900598745166473 0.2901627246413987 SESDLEDVGPTAEWNGDGS(ph)GSLRR ddPTM_A549_MK2206_60min_R1 2 SESDLEDVGPTAEWNGDGSGSLRR 24 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 SESDLEDVGPTAEWNGDGS(0.561)GS(0.439)LRR;SESDLEDVGPTAEWNGDGS(0.5)GS(0.5)LRR 153.12 3.9628999999999997e-29 26313000.0 2062.92 1659.88 1592.27 1467.9099999999999 2595.2 2116.0 2069.4700000000003 2364.74 3215.2 2726.0 3174.5 True False 2411.0904624483237 1744.3608020792908 1818.0778287845508 1827.5480158969838 2213.449517840653 2339.9137155128788 2445.465911346431 2699.949136712523 2486.962333619364 2110.1947067107776 2386.1840382571113 1.0104377633040427 0.7310252579484131 0.7619185275048985 0.7658872855556607 0.9276105624515764 0.9806090720571458 1.024843797518912 1.131492413587926 1.0422340832670485 0.8843386230393534 1.0 11.220489602146872 -7.089773974064072 2.2063982161724263 1.029238952754089 0.8079651242251359 0.5003878391421113 0.0886182837525877 0.14710020521541028 1.408202943293649 0.011313215450959814 0.021953796726060563 8.132536589906902e-08 7.089773974064072 -0.22127382852895316 SESDLEDVGPTAEWNGDGS(ph)GSLRR ddPTM_A549_PD325901_60min_R1 2 SESDLEDVGPTAEWNGDGSGSLRR 24 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 SESDLEDVGPTAEWNGDGS(0.5)GS(0.5)LRR;SESDLEDVGPTAEWNGDGS(0.5)GS(0.5)LRR 99.87299999999999 4.219100000000001e-09 51402000.0 6013.9 6241.6 6702.9 6918.9 6711.299999999999 7410.4 6087.1 6063.9 7841.8 7696.200000000001 7553.6 True False 6624.4267008008155 6767.601536897104 7157.799101812095 7346.26473903801 6239.921440728087 7350.052159310285 6318.747921488928 5942.950757462473 7512.236416594072 7210.260618558295 6624.55508621557 0.9999806197679567 1.0215933672253985 1.0804950685225796 1.1089446224583714 0.9419381920020815 1.1095163469323903 0.953837327828556 0.8971094179333817 1.1339986336932417 1.0884143198629999 1.0 12.693607849192906 SESDLSQPES(ph)DEEGYALSGR ddPTM_A549_MK2206_60min_R1 2 SESDLSQPESDEEGYALSGR 20 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 SESDLSQPES(1)DEEGYALSGR;SESDLS(0.001)QPES(0.999)DEEGYALSGR 217.26 8.082699999999999e-67 20399600.0 855.74 1142.88 950.8000000000001 1282.42 1615.1100000000001 1144.14 1379.08 1414.81 1771.17 1515.3200000000002 1415.58 True False 1000.1679911656923 1201.0477103648327 1085.6377370724501 1596.6129575700206 1377.52945852328 1265.2121353813345 1629.640984899339 1615.3636501739063 1370.0028229772977 1173.008159564554 1064.0524179795243 0.9399612032881436 1.1287486312426618 1.0202859546467768 1.5005021656750226 1.2946067648988586 1.1890505711962784 1.5315420155651565 1.5181241289233092 1.2875332077894501 1.1023969681793688 1.0 10.055353508148169 -4.112914306827841 10.477597121488744 1.2018665040983592 1.1769239759093437 0.0 0.20704594453355432 0.0 0.0 0.029718477472876852 0.0 7.710555955231586e-05 4.112914306827841 -0.024942528189015434 SESDLSQPES(ph)DEEGYALSGR ddPTM_A549_PD325901_60min_R1 2 SESDLSQPESDEEGYALSGR 20 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 SESDLSQPES(1)DEEGYALSGR;SESDLSQPES(1)DEEGYALSGR 238.94 2.636599999999999e-85 21488000.0 1276.98 1045.54 1708.9099999999999 1371.94 1670.37 1194.2 1339.6100000000001 1117.32 1704.79 1352.94 1632.0 True False 1406.6180695370092 1133.6513251229492 1824.8869091106383 1456.681617898192 1553.048973663668 1184.474831135749 1390.5895916127195 1095.0341760794163 1633.143604866919 1267.515137505815 1431.2743461003763 0.9827732002389723 0.7920573216530252 1.2750084664639532 1.0177515036631795 1.085081261950287 0.827566590823728 0.9715744541928626 0.7650763664303257 1.1410416244213082 0.8855850319397279 1.0 10.48308451844777 SESDLSQPES(ph)DEEGYALSGRR ddPTM_A549_PD325901_60min_R1 1 SESDLSQPESDEEGYALSGRR 21 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 S(0.004)ES(0.004)DLS(0.016)QPES(0.958)DEEGY(0.002)ALS(0.017)GRR 41.086999999999996 0.035197000000000006 1503200.0 671.56 383.37 282.64 545.14 755.16 920.17 437.1 450.4 474.56 587.16 612.31 True False 739.7362768236571 415.67793533713194 301.82165005239057 578.8120596972317 702.1201667605711 912.6764406013908 453.73407969029785 441.41641866803553 454.6158935268538 550.0866173946475 536.9997517528933 1.3775356029662662 0.774074725323916 0.5620517496836336 1.0778628068408844 1.307486948492408 1.6995844739633503 0.8449428108843686 0.8220048840379324 0.8465849230709712 1.0243703383456615 1.0 9.068777611048816 SESDS(ph)SPDSK ddPTM_A549_MK2206_60min_R1 2 SESDSSPDSK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SES(0.006)DS(0.59)S(0.404)PDSK;SES(0.001)DS(0.602)S(0.396)PDS(0.001)K 131.82 1.0658e-06 12245100.0 5078.4 4285.2 3477.5 2371.2 657.6800000000001 362.04200000000003 542.77 421.9 630.26 6451.4 6438.4 True False 5935.509765040604 4503.298376430931 3970.6617907756054 2952.144106447214 560.9361432234282 400.35304413597055 641.3842832713216 481.7056170145614 487.5071163184063 4994.024259308111 4839.567589199744 1.2264545655456134 0.9305166822095323 0.8204579681120192 0.6100016276320611 0.11590625254934869 0.08272496183944641 0.13252925420499787 0.09953484647875632 0.10073361045857797 1.0319153865012778 1.0 12.24066243447891 -5.987531904959305 1.636379419375173 0.43246311582862307 1.1391848556541642 0.4001731778869011 0.3382980805321232 0.4281718343865546 2.0853710281107007 0.06032634230099965 0.3063753355820017 1.0291249209038053e-06 5.987531904959305 0.7067217398255411 SESDS(ph)SPDSK ddPTM_A549_PD325901_60min_R1 2 SESDSSPDSK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)ES(0.011)DS(0.662)S(0.326)PDSK;SES(0.017)DS(0.965)S(0.017)PDSK 76.143 0.0014941 3608900.0 1509.72 1706.29 1823.31 1552.06 1899.63 1692.05 1252.48 1592.0 1811.22 1853.2199999999998 2089.84 True False 1662.9856630028767 1850.0850465252763 1947.0507810537229 1647.9272212159917 1766.2065421677319 1678.2705057973888 1300.1438117833534 1560.2463111001612 1735.1007220872154 1736.2073729274957 1832.8029285872617 0.9073455945886766 1.0094293378019292 1.0623350446927342 0.8991295220628147 0.9636641859412224 0.9156851943111048 0.7093745822337342 0.8512897304800854 0.9466924648710836 0.9472962672892374 1.0 10.839835953663354 -4.953020145559603 14.566010252031715 0.9483553287840236 0.7092253299521412 0.0 0.09027779150468607 2405567.10398898 22279148.60939739 0.013242296583118481 15508801.208140519 1.1142428461601897e-05 4.953020145559603 -0.23912999883188246 SESDS(ph)SPDSKAK ddPTM_A549_PD325901_60min_R1 1 SESDSSPDSKAK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)ES(0.002)DS(0.498)S(0.498)PDSKAK 70.488 0.00053162 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SESDSS(ph)PDSK ddPTM_A549_PD325901_60min_R1 2 SESDSSPDSK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SES(0.001)DS(0.169)S(0.83)PDSK;SES(0.003)DS(0.329)S(0.668)PDSK 144.17 4.3811999999999996e-08 25008000.0 7606.5 7226.200000000001 6739.2 6336.2 7964.6 5377.2 3508.7 5136.5 6268.4 8515.099999999999 9305.3 True False 8378.706280390657 7835.17723435111 7196.562638101728 6727.572683445724 7405.193972378365 5333.409866004977 3642.2254985343134 5034.0484779937 6004.960946948188 7977.455132803942 8160.807091156762 1.0267006910958618 0.9600983268972855 0.8818444741697288 0.8243758991357455 0.907409511052259 0.6535395098095607 0.4463070205986259 0.6168566934327746 0.7358292972585153 0.9775326194695247 1.0 12.994496124215415 -5.758856158051742 1.2749754067024037 0.8056284803565712 1.0429772172612395 0.22134660520655647 0.15666955243099603 1.110947020256723 2.622841144612078 0.027818328048456162 0.27141313377571163 1.7423838698777727e-06 5.758856158051742 0.2373487369046683 SESELIDELS(ph)EDFDRSECK ddPTM_A549_PD325901_60min_R1 2 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;E7EQ12;H0Y9H6;E7EQA0;A0A0A0MR45;H0YD33;D6RC54;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 SESELIDELS(1)EDFDRSECK;SESELIDELS(1)EDFDRSECK 251.02 1.3226999999999998e-97 130810000.0 23897.0 24791.0 25232.0 25513.0 28818.0 25940.0 27512.0 28858.0 23047.0 27167.0 29921.0 True False 26323.00584795839 26880.22457402206 26944.395252341936 27088.880065772977 26793.923096702874 25728.753240379578 28558.984215144064 28282.404551336942 22078.41473810142 25451.670983650783 26240.906684846417 1.0031286709753586 1.0243634069833736 1.0268088513840021 1.0323149421287432 1.021074592372062 0.9804826315409826 1.0883383168934588 1.0777982975591864 0.8413739282435407 0.9699234591748539 1.0 14.679529948862644 -8.748746156581937 24.999627400347343 0.9250932385956588 1.0312103956425847 0.447703424254863 0.0463149855911424 172.5726625749776 339886.14935616846 0.010467874892298983 0.011831655537106814 1.7834208653549995e-09 8.748746156581937 0.10611715704692581 SESGTDLREHS(ph)PSESEK ddPTM_A549_MK2206_60min_R1 1 SESGTDLREHSPSESEK 17 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 S(0.002)ES(0.002)GT(0.001)DLREHS(0.962)PS(0.034)ESEK 69.763 0.0005971 4200100.0 701.36 879.87 654.87 644.92 833.77 635.4 450.6 500.96 1174.7 1031.9 1181.2 True False 819.7324213943137 924.6516247713728 747.74041320639 802.9254289515594 711.1235374884401 702.637606255616 532.4681873391263 571.9726141256568 908.6323256104336 798.7930733143249 887.8754405384467 0.9232516003564554 1.0414204319139895 0.842168145514789 0.9043221518376836 0.8009271402497444 0.7913695707468895 0.5997104582780375 0.6442036664273397 1.0233781498217802 0.8996679453481692 1.0 9.794213485807337 -8.806748876821695 24.998312515066186 1.0110398166728258 0.8207344266398698 0.23364624122960997 0.12083256771413434 110.17594676774267 60786.170858063255 0.022107717328576373 0.02353550264031271 1.5604545475197075e-09 8.806748876821695 -0.190305390032956 SESLDPDS(ph)SMDTTLILK ddPTM_A549_PD325901_60min_R1 1 SESLDPDSSMDTTLILK 17 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.005)ES(0.295)LDPDS(0.319)S(0.319)MDT(0.054)T(0.009)LILK 99.28299999999999 2.1144000000000002e-07 5012100.0 1751.0 1726.9 2175.1 1878.6 2056.2 2004.8 1895.0 2108.2 1702.2 1828.9 2086.5 True False 1928.760230981929 1872.4319235560768 2322.715365938846 1994.636855389844 1911.7796055049093 1988.4735734893218 1967.115261983789 2066.150297149093 1630.6624535599528 1713.422941877974 1829.873727413257 1.0540400695890966 1.0232574496836897 1.26933095499561 1.0900407090982716 1.0447603989633951 1.086672563084593 1.0750005492261694 1.1291217892230416 0.8911338684910718 0.936361299804058 1.0 10.83752838173967 -8.755477644103093 24.998439841108553 0.9485909917288717 1.0968578773937674 0.5210715286324594 0.06569503572337736 89.96265898717999 377226.2769777812 0.012081299951526465 0.013524350108742785 1.7559912839032903e-09 8.755477644103093 0.14826688566489565 SESLIDAS(ph)EDSQLEAAIR ddPTM_A549_MK2206_60min_R1 1 SESLIDASEDSQLEAAIR 18 0 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 SESLIDAS(0.5)EDS(0.5)QLEAAIR 44.601000000000006 0.047488999999999996 16583000.0 670.89 535.4 588.45 659.45 762.1 539.82 684.22 631.05 1345.2 1046.5 858.41 True False 784.1198303142904 562.6495731217027 671.901058456335 821.0152796038351 649.9960995477651 596.9433940964844 808.5339173128647 720.5032700095726 1040.514347842985 810.0949231741844 645.243106089238 1.2152316280708089 0.8719962566231393 1.0413145868828704 1.2724123231318762 1.007366205719476 0.9251449391137335 1.2530686646360594 1.1166384626353931 1.6125927391141788 1.2554879169249846 1.0 9.33369901212419 -7.8771268466783155 7.128921070729545 1.2797066597307314 1.0546146929560782 0.21888970431615828 0.1763657279812132 0.3151816244970789 18.61094394310763 0.037692396907011164 0.0522205695134176 1.3270068152474721e-08 7.8771268466783155 -0.22509196677465315 SESLIDASEDS(ph)QLEAAIR ddPTM_A549_MK2206_60min_R1 1 SESLIDASEDSQLEAAIR 18 0 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 SESLIDASEDS(1)QLEAAIR 168.32 3.4972e-30 16399000.0 887.24 709.28 800.1 790.57 1237.1 682.67 910.87 895.41 1426.4 1232.6 1179.8 True False 1036.9844210646324 745.3793224201747 913.5662110135333 984.2596854900361 1055.124228776461 754.909686280329 1076.3632885077445 1022.3371095781192 1103.3226774927402 954.154803922121 886.8230991764814 1.16932500069923 0.8405050828201772 1.0301560839606976 1.109871502449627 1.1897798216535709 0.8512517174861036 1.2137294230464601 1.1528083904529307 1.244129385575662 1.0759246176697077 1.0 9.792502538501983 SESLIDASEDS(ph)QLEAAIR ddPTM_A549_PD325901_60min_R1 2 SESLIDASEDSQLEAAIR 18 0 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 SESLIDASEDS(1)QLEAAIR;SESLIDASEDS(1)QLEAAIR 403.47 0.0 63294000.0 7594.2 7118.6 7570.5 7506.0 9144.6 8204.3 7840.5 9274.1 8554.2 8791.099999999999 7499.5 True False 8365.157593445443 7718.509404728878 8084.279655114715 7969.628572637169 8502.314843157374 8137.486900926992 8138.874517986229 9089.120800109298 8194.696722031804 8236.02844570149 6577.109043247409 1.2718593440432295 1.1735413468100124 1.2291539644480562 1.2117221290134201 1.292713073061566 1.2372437262966762 1.2374547030419474 1.3819325086971035 1.2459420496373161 1.2522262275942133 1.0 12.683237873871356 -10.475981079961125 0.8407512816060236 1.0022102634564507 1.2517414440971786 0.00263881069320393 0.08832730020835976 0.22934704801822103 0.2961054172040983 0.03418332975668202 0.010300508161239817 3.342095995499974e-11 10.475981079961125 0.24953118064072788 SESLT(ph)AESR ddPTM_A549_PD325901_60min_R1 2 SESLTAESR 9 0 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 SES(0.315)LT(0.685)AESR;SES(0.257)LT(0.743)AESR 145.25 3.4255e-05 18969700.0 3827.9 3769.7000000000003 3195.2 3700.6 4633.5 3502.6 3245.7 3595.2 3688.7 3838.3 4705.2 True False 4216.50559004896 4087.3858487632992 3412.045486298467 3929.1776573276156 4308.0589447072225 3474.075986883329 3369.216889615187 3523.49091562016 3533.676766799786 3595.949082951622 4126.490228720277 1.0218140250768506 0.9905235738388978 0.8268638230500849 0.9521839237569569 1.044000762372641 0.8418960894912195 0.8164848825196569 0.8538711399573286 0.856339545458142 0.8714304126843436 1.0 12.010699508826658 -7.273786218762473 24.944327587568363 0.9087755068043376 0.9597627628941993 0.21768759425993045 0.07266560971574028 1648.8648389006917 3331200.144598698 0.013119513502242143 0.021063510667673375 5.3237025376444934e-08 7.273786218762473 0.050987256089861654 SESPCES(ph)PYPNEKDKEK ddPTM_A549_PD325901_60min_R1 2 SESPCESPYPNEKDKEK 17 2 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;B7ZBA0;H0Y594;B7ZB98 A0A0C4DG98 THOC2 THO complex subunit 2 1 SESPCES(1)PYPNEKDKEK;SES(0.001)PCES(0.999)PYPNEKDKEK 124.31 7.7567e-11 32303000.0 6693.799999999999 6799.9 8962.5 6084.6 7668.6 6298.1 6865.0 7238.4 5196.5 6800.6 7769.8 True False 7373.349648284887 7372.951437251122 9570.749145890713 6460.43192287078 7129.983991233801 6246.810361728399 7126.251331672146 7094.02443358505 4978.109176315529 6371.208955402347 6814.1638568202825 1.0820622754624423 1.0820038367394924 1.4045375701248173 0.948088724987813 1.046347599067113 0.916739088314699 1.0457998195243714 1.0410704207655141 0.7305531949210393 0.934994973598326 1.0 12.734320924285923 -7.1140243205302465 0.8065295112598665 0.8867382864914625 1.1675804180047664 0.3090426804060932 0.12891992816638426 0.5338231986840679 0.667086113112591 0.02619011231754625 0.07540993997270809 7.690873701184027e-08 7.1140243205302465 0.28084213151330395 SESPKEPEQLR ddPTM_A549_MK2206_60min_R1 2 SESPKEPEQLR 11 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 93.959 0.00029208 29008000.0 8256.7 8855.8 7890.5 7394.1 11257.7 7852.4 7602.7 7464.7 11570.599999999999 12205.900000000001 11808.2 False True 9650.229103066076 9306.522393819901 9009.491548559292 9205.654831933769 9601.70724298501 8683.33575599874 8984.012179057194 8522.844084684988 8949.877574451411 9448.578712634286 8875.898050259131 1.087239741648941 1.048516143507101 1.0150512655219446 1.0371519343515905 1.0817730429772894 0.9783050353699398 1.0121806411233967 0.9602232964399771 1.0083348776398036 1.0645208697905713 1.0 13.115677381305813 -7.268371013971335 24.998006487432175 0.9994699718874386 1.050550874007941 0.39394582789514754 0.03048859146881922 320.28433809836787 1155061.2187157318 0.003427325129402917 0.005546009695973313 5.390499201316177e-08 7.268371013971335 0.051080902120502425 SESPKEPEQLR ddPTM_A549_PD325901_60min_R1 2 SESPKEPEQLR 11 1 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 83.617 0.00059787 70767000.0 10159.2 11445.3 9826.3 11343.5 12145.3 10594.0 11022.9 10718.6 10565.099999999999 11543.2 12589.7 False True 11190.554505192247 12409.835598283837 10493.17180834208 12044.162232042327 11292.256027010388 10507.725976429509 11442.38249146232 10504.809114420972 10121.08558812493 10814.360382025165 11041.24671268377 1.0135227294882343 1.123952387009692 0.9503611395883328 1.0908335394957207 1.0227337836802677 0.951679303059013 1.0363306598626894 0.9514151243766198 0.9166614832089756 0.9794510224648847 1.0 13.43061546150768 -7.340529831119336 1.1326043719826706 0.9613382420014368 1.04676179684239 0.28683118313223044 0.05094868400612767 0.4188133978819332 1.061936516088481 0.00872164032504881 0.018015795776369487 4.5653089061608733e-08 7.340529831119336 0.0854235548409531 SESPKEPEQLRK ddPTM_A549_PD325901_60min_R1 1 SESPKEPEQLRK 12 2 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 90.73100000000001 9.0506e-05 9490900.0 3243.1 3535.5 3434.3 4030.9 4422.0 4608.6 4122.5 4369.0 4464.2 4354.6 4439.7 False True 3572.337124555966 3833.4489928383296 3667.372250123567 4279.8795381618875 4111.413975071836 4571.069089576463 4279.38399341856 4281.856867585806 4276.58519867368 4079.649812839315 3893.6450455771082 0.9174788874537693 0.9845399228655533 0.9418866402034848 1.0991961229294676 1.0559293225103035 1.1739819721802474 1.099068852791197 1.0997039579788295 1.0983500418281742 1.0477713723477424 1.0 11.926905655025717 -6.254755097215218 24.858201893888815 1.0675468849105885 0.9516256184920597 0.6271582849806026 0.04546674076560189 343.60822917752745 1277840.0970952325 0.007883298288247327 0.020333892649620666 5.562178253666915e-07 6.254755097215218 -0.11592126641852873 SESPS(ph)KDFGPTLGLK ddPTM_A549_PD325901_60min_R1 2 SESPSKDFGPTLGLK 15 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 S(0.017)ES(0.393)PS(0.589)KDFGPTLGLK;S(0.122)ES(0.362)PS(0.516)KDFGPTLGLK 92.47399999999999 7.5215e-06 13130600.0 8158.400000000001 8338.3 8893.5 9648.1 10733.5 10135.2 10052.2 10216.4 11130.3 9479.6 10543.400000000001 True False 8986.634762103355 9040.99780426639 9497.066390960004 10244.041224575096 9979.615988564801 10052.662291514855 10434.741971774907 10012.625887389244 10662.53219766087 8881.056438201349 9246.628640119305 0.9718823056343057 0.9777615340838148 1.0270842228651964 1.107867702194529 1.0792707674303268 1.0871705442887938 1.1284915159781168 1.0828407062814687 1.1531264650770376 0.9604642712337543 1.0 13.174711733451874 -5.9725945927394 3.0675644504304063 1.0819169558531543 0.9745268410798822 0.3537340715804653 0.051852053576547985 0.20550157667357385 3.936451732809881 0.007807684458943735 0.027400198305822326 1.065136843254312e-06 5.9725945927394 -0.1073901147732721 SESQERPGS(ph)R ddPTM_A549_MK2206_60min_R1 1 SESQERPGSR 10 1 A0A3B3ISF0;Q659C4-9;Q659C4;G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;A0A3B3ISF8;Q659C4-3 A0A3B3ISF0 LARP1B La-related protein 1B 1 SESQERPGS(1)R 48.568000000000005 0.025673 4852200.0 558.06 447.17 460.25 233.44 413.06 293.42 476.68 362.19 487.84 898.6 1103.8 True False 652.2468847429432 469.9290429825023 525.5203707273824 290.6328104795198 352.29942117727336 324.46950964356733 563.2865857541378 413.53154166035523 377.3450189203997 695.6056358951961 829.6959966697751 0.7861275543824783 0.566387019906928 0.6333890639905585 0.35028831240123925 0.4246126564323909 0.3910703570294657 0.6789071997635899 0.4984133264716037 0.4547991317723396 0.8383861543109892 1.0 9.69643901486508 -10.754880158510494 0.856007051435672 1.0204364704954858 0.5223665228290004 0.5495269596524567 0.1324020122880926 0.32507557220973043 0.3946170642668894 0.10745871528872471 0.02333638522834931 1.7584087715252302e-11 10.754880158510494 -0.4980699476664854 SESQERPGS(ph)R ddPTM_A549_PD325901_60min_R1 1 SESQERPGSR 10 1 A0A3B3ISF0;Q659C4-9;Q659C4;G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;A0A3B3ISF8;Q659C4-3 A0A3B3ISF0 LARP1B La-related protein 1B 1 SESQERPGS(1)R 47.559 0.027347000000000003 7547900.0 280.53 98.74799999999999 165.85 425.14 294.63 367.38 205.64 131.7 221.75 229.4 173.75 True False 309.0091990847289 107.06984051613613 177.10557833706835 451.3999322370054 273.93620521832094 364.38817908445094 213.4657427305258 129.07314018334864 212.4306186563972 214.91564485035104 152.37985149199787 2.0278875196367827 0.7026509047474615 1.1622637547088628 2.9623334569315443 1.7977193345191476 2.391314701495076 1.4008790574371692 0.847048602026803 1.3940860066237357 1.4103941088408083 1.0 7.251528344087145 -7.990224187876336 24.74519463115685 1.163871922030178 1.8145696690561173 0.2380667615588804 0.5719706019894882 219.38686100702122 555323.7477311929 0.09087965516189822 0.12548629329295719 1.022764892821689e-08 7.990224187876336 0.6506977470259392 SESS(ph)ERR ddPTM_A549_MK2206_60min_R1 1 SESSERR 7 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 S(0.001)ES(0.298)S(0.701)ERR 54.776 0.017417 19353000.0 2653.8 2319.3 1699.0 788.76 25.752 0.0 0.0 8.1454 171.61 3316.6 3227.9 True False 3101.6965608193054 2437.342463468743 1939.9437476715323 982.0062354087822 21.96391491346812 0.0 0.0 9.300035394241307 132.74060900485782 2567.3777565212617 2426.323344492088 1.2783525196097043 1.0045414882569832 0.7995404866689887 0.4047301599920721 0.009052344553881344 0.0 0.0 0.003832974453035286 0.054708540519213006 1.0581350430268812 1.0 11.244556108991317 -10.969140767698827 1.2803608350191205 0.9945884548002623 0.3474674139433324 0.23210906166051648 0.4345511228832854 0.5967432881791138 1.7630549290772712 0.32869032939053316 0.07873836309431925 1.0736413569879324e-11 10.969140767698827 -0.6471210408569299 SESS(ph)ERR ddPTM_A549_PD325901_60min_R1 1 SESSERR 7 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 SES(0.259)S(0.741)ERR 76.605 0.014149 18915000.0 1121.0 1322.2 1039.4 1024.1 1294.5 1204.6 551.89 522.06 992.04 1671.6 1896.0 True False 1234.8030947634159 1433.626434261304 1109.9399344199517 1087.3563311001496 1203.5787857825626 1194.7901369838576 572.892475955796 511.64710375185285 950.3480087120289 1566.0548907229584 1662.8040197342602 0.742602904556819 0.8621740248681969 0.6675109761866801 0.6539293375499085 0.7238247992537999 0.7185393605043137 0.34453397343082703 0.30770138734306246 0.5715333842312386 0.9418156752912086 1.0 10.699402425374533 -10.655604134167461 1.042901589460134 0.9893663356712361 0.6209434325863852 0.4158413556678221 0.15881345343353787 0.4097972438031953 0.8260522980337118 0.10346485984476092 0.030996973532960617 2.2100182794831102e-11 10.655604134167461 -0.36842290308485093 SESS(ph)PIVR ddPTM_A549_MK2206_60min_R1 2 SESSPIVR 8 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 SES(0.403)S(0.597)PIVR;SES(0.075)S(0.925)PIVR 104.06 0.0020916 15372800.0 1817.12 2173.1 2022.8899999999999 1805.52 2256.7799999999997 1548.47 1862.83 1791.97 2590.13 2258.6 2774.5 True False 2123.8054316813545 2283.701507939434 2309.7662199689626 2247.8724810528734 1924.8106515383886 1712.3280676088025 2201.2820981379155 2045.9872351779638 2003.469690587683 1748.3806913341737 2085.5150776954965 1.018360142487279 1.0950299675909965 1.1075279410212966 1.077850026160819 0.9229425728560605 0.821057630281404 1.0555100376307718 0.9810464844199491 0.9606594131179939 0.8383447859154978 1.0 11.026188027211877 -6.744232197799652 24.645691080080073 0.970983728895658 1.0784902088052113 0.41613224110467095 0.07090721285976186 155.31873191478567 222460.15837542494 0.008466139784495166 0.017588261290868247 1.8020540057189154e-07 6.744232197799652 0.10750647990955331 SESS(ph)QK ddPTM_A549_PD325901_60min_R1 1 SESSQK 6 0 P62753;A2A3R5 P62753 RPS6 40S ribosomal protein S6 1 SES(0.488)S(0.512)QK 65.252 0.05756 2452800.0 2351.8 1741.1 1197.9 1613.9 1077.3 835.07 1397.2 970.02 810.81 1368.8 2377.6 True False 2590.5530046963468 1887.8286073909824 1279.1966975578785 1713.5869375671618 1001.6341644832398 828.2694667865758 1450.3712105771765 950.6721901340306 776.734475367727 1282.373734399131 2085.1702728481955 1.2423700061471883 0.905359448085907 0.6134734962486234 0.8217971260574912 0.4803608499151862 0.39721910367311064 0.6955648799827132 0.45592065190699244 0.37250409977635185 0.6149971304969253 1.0 11.025949482127508 -2.0149856650443874 9.4201283298503 0.6898641383036278 1.050825799842437 0.0 0.26315296606478783 0.0 0.0 0.039734215758125385 0.0 0.009660827663970865 2.0149856650443874 0.36096166153880926 SESSTSAFST(ph)PTR ddPTM_A549_MK2206_60min_R1 2 SESSTSAFSTPTR 13 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 SESSTSAFS(0.003)T(0.997)PTR;SESSTSAFS(0.002)T(0.998)PTR 175.48 6.3515e-22 43059000.0 6460.2 7727.6 6334.9 5627.6 7532.8 7229.799999999999 6096.7 6741.299999999999 9173.8 10314.2 9034.8 True False 7550.523823274125 8120.901832751718 7233.2840771773945 7006.362252632564 6424.735098639818 7994.852637247163 7204.391473036947 7696.899919365394 7095.948947548306 7984.2150564769945 6791.209812205184 1.111808356988809 1.1957960447867193 1.0650950680654445 1.0316810180184255 0.9460369030409373 1.1772354055206464 1.0608406561212689 1.133362115470575 1.0448725843803919 1.1756690305941864 1.0 12.72945288926381 -2.000000003644657 0.012231585949411324 9.958526595791664e-10 2.3289530180804197 0.0 0.0841575475850099 6870.023605293666 6.315795676339457 498.7121719138578 723.6104663611244 0.00999999991607867 2.000000003644657 2.328953017084567 SESSTSAFST(ph)PTR ddPTM_A549_PD325901_60min_R1 2 SESSTSAFSTPTR 13 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 SESSTSAFS(0.03)T(0.969)PTR;SESSTSAFS(0.003)T(0.996)PT(0.002)R 169.09 1.3859e-21 52668000.0 9745.4 10748.0 9598.3 12094.0 11499.5 11138.900000000001 10417.2 10897.5 12434.7 11368.8 11157.4 True False 10734.745833815705 11653.771680109277 10249.698357266709 12841.018912533162 10691.814791121335 11048.188491490526 10813.632246510568 10680.140813576629 11912.112801834064 10650.972027788459 9785.110532585999 1.0970490111549855 1.1909698558131085 1.0474790574039565 1.3123018763835619 1.0926616266127873 1.1290816240346262 1.1051108937910743 1.091468591796693 1.2173713073720327 1.08848765604834 1.0 13.256372432286064 -10.987556820630111 1.2342170739653309 0.9992095597214188 1.1494102029434103 0.16988307118659451 0.07487876548622903 0.3864373620060666 1.0382282694413172 0.049293066883972295 0.011050042364291104 1.0290658812353269e-11 10.987556820630111 0.15020064322199156 SEST(ph)ENQSYAK ddPTM_A549_MK2206_60min_R1 1 SESTENQSYAK 11 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 S(0.001)ES(0.297)T(0.702)ENQSYAK 145.31 2.3268e-11 9935000.0 2358.3 2751.2 2509.4 1959.6 2736.5 2597.1 2399.7 2921.1 3836.0 3616.4 3965.0 True False 2756.3233851006753 2891.224328674691 2865.270653565006 2439.702087969785 2333.9644750196294 2871.9233981845446 2835.6944277800712 3335.174870493565 2967.1521248332533 2799.4527283011207 2980.3810715670024 0.9248224703197019 0.9700854552651433 0.96137728188514 0.818587297860893 0.7831094141906139 0.9636094610796082 0.9514536429024967 1.119043098988688 0.9955613237313999 0.939293553770037 1.0 11.541281090152086 -7.693868186278955 2.7976634672942104 1.0068004854289483 0.8954888312221688 0.367310118010731 0.06770344302427493 0.21751397847682147 3.4740765248041967 0.010536497991688773 0.01592612812169879 2.0236332830900166e-08 7.693868186278955 -0.11131165420677946 SEST(ph)ENQSYAK ddPTM_A549_PD325901_60min_R1 1 SESTENQSYAK 11 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 SES(0.288)T(0.712)ENQSYAK 156.08 3.7531999999999996e-13 13094000.0 3842.6 3918.4 3331.0 3933.2 4244.5 4336.5 4606.0 3651.2 3651.4 4887.9 4024.4 True False 4232.697923227389 4248.617319625995 3557.0616909302053 4176.1448310546875 3946.380962730076 4301.184981761994 4781.283850499909 3578.3739516890105 3497.944356085544 4579.277159825764 3529.424312773502 1.1992601478684886 1.203770627478716 1.007830562637844 1.1832368287203694 1.1181372974758368 1.2186647454644026 1.354692274656732 1.0138690150510814 0.9910807106490348 1.297457249119266 1.0 11.785217168204378 -8.483217809688169 24.30402986648958 0.9961400300685794 1.1770350051002738 0.027607239203895073 0.11964872817429843 211.17010515192374 129404.17220939748 0.012704203207061964 0.015357160517850592 3.286867448003697e-09 8.483217809688169 0.18089497503169438 SEST(ph)QPLLDSEERPEDLQLVDHVDGGDGILPR ddPTM_A549_MK2206_60min_R1 1 SESTQPLLDSEERPEDLQLVDHVDGGDGILPR 32 1 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 S(0.068)ES(0.425)T(0.507)QPLLDSEERPEDLQLVDHVDGGDGILPR 204.51 1.1045999999999998e-88 10748000.0 1010.5 2261.0 1273.4 1119.2 1552.5 1076.5 1402.5 1173.0 2856.8 1698.3 2759.4 True False 1181.0476956469627 2376.0752424881784 1453.987267972295 1393.4040502427968 1324.1293065843142 1190.4145154771327 1657.3160957459481 1339.2763421618408 2209.7393613721674 1314.6528504794242 2074.164824434297 0.5694087961254858 1.145557582742357 0.7009989036762555 0.6717904159920515 0.6383915545118042 0.5739247438070905 0.7990281564040894 0.6456942699947252 1.0653634346416259 0.6338227487962437 1.0 11.018314827774473 -8.766630144374878 24.99257421958973 1.030866085997046 0.7254691479895139 0.04679256938308496 0.19221644110030248 80.07918674609483 385565.40523431904 0.02539860053500974 0.027435754987258525 1.7114722255386542e-09 8.766630144374878 -0.3053969380075321 SESVEGFLS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SESVEGFLS(1)PSR;SESVEGFLS(0.998)PS(0.002)R 138.02 1.8192e-08 61835000.0 2436.2 2753.9 2629.1 2545.3 3572.7 2481.8999999999996 2411.5 2756.2 4377.7 3856.5 4460.0 True False 2847.371000628532 2894.061747142059 3001.9459134804165 3168.8986142628605 3047.160562727072 2744.5330106481133 2849.638335038398 3146.8997905084943 3386.157939750397 2985.3139715444277 3352.458910261998 0.8493380759754061 0.8632653895572684 0.8954459976500686 0.9452460713426635 0.908933008365771 0.8186626843499851 0.8500143957963369 0.9386840748072169 1.0100520335641534 0.8904848803385103 1.0 11.711003934368412 -8.55229087564279 3.4366313927737986 1.0046322712848197 0.878173496057164 0.36559025693503566 0.04707832135462306 0.08819423469201378 2.19241991025278 0.00596177285814182 0.006913987305739577 2.803555283212202e-09 8.55229087564279 -0.1264587752276557 SESVEGFLS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SESVEGFLS(0.999)PS(0.001)R;SESVEGFLS(0.962)PS(0.038)R 167.71 1.4760999999999999e-15 90721000.0 3867.5 4754.5 4529.8 3956.2 4778.7 3925.6 3934.6 4135.4 4508.7 4108.6 5469.799999999999 True False 4260.125752896977 5155.178400919202 4837.219467900224 4200.5654888179 4443.06059762003 3893.6312151285333 4084.3333560957335 4052.91620284146 4319.215018426598 3849.1822948219383 4797.04927591902 0.8880721268140029 1.0746561280489602 1.0083739377418648 0.875656105911723 0.9262069956054032 0.8116721324240702 0.8514261832995775 0.844876916980387 0.9003899626607695 0.8024062446355652 1.0 12.22793154383019 -4.908970159424575 14.097140582172633 0.9343418656541751 2.4158855492498586e-05 0.0 0.08606372715830439 1064402.4235530694 2796144.073134082 0.011544981441041982 30162364.117663875 1.2331895633452232e-05 4.908970159424575 -0.9343177067986826 SESVEGFLSPS(ph)R ddPTM_A549_MK2206_60min_R1 2 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SESVEGFLS(0.02)PS(0.98)R;SESVEGFLS(0.007)PS(0.993)R 134.99 3.9908e-08 4605200.0 1163.53 1414.26 1334.1100000000001 1276.26 1981.69 1483.05 1412.6599999999999 1807.8600000000001 2267.0 2112.95 2352.5 True False 1359.9054184226716 1486.2397932071337 1523.306858861724 1588.9437572934878 1690.1860261288687 1639.9853666310846 1669.3220362327788 2064.129691339049 1753.528119655106 1635.6331274924926 1768.309324302995 0.7690427233135233 0.8404863180784035 0.8614481855215901 0.8985666339342486 0.9558203437032037 0.927431272397723 0.9440215087316618 1.167289943546871 0.9916410525891926 0.9249700292889658 1.0 10.788154947176645 -6.271765389986181 0.6411022807059827 1.006772972337579 0.7584294083598333 0.6138351297666322 0.060792824295020705 0.5966381444855348 0.32596805999724154 0.01009108522703344 0.08510158073847811 5.348532141672542e-07 6.271765389986181 -0.2483435639777456 SESVEGFLSPS(ph)R ddPTM_A549_PD325901_60min_R1 2 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SESVEGFLS(0.003)PS(0.997)R;SESVEGFLS(0.003)PS(0.997)R 109.0 0.00010544 12302600.0 4303.5 3394.9 3663.7 3813.7 4673.5 4580.2 3843.5 4165.0 4592.5 4431.700000000001 4561.0 True False 4740.3881519307415 3681.000137402585 3912.340713617831 4049.263587458879 4345.249482699733 4542.900369760469 3989.7664957439015 4081.925807620709 4399.493195848949 4151.881705681347 4000.025914561165 1.1850893602150077 0.9202440724203209 0.9780788417834654 1.0123093384766524 1.086305332893435 1.135717734533443 0.9974351619123475 1.0204748406157587 1.0998661733249318 1.0379637018268772 1.0 11.96579363133403 -6.710766987752032 24.536357861568295 1.0513657469176854 1.0132489996590155 0.030602684447228246 0.07184958129290056 226.8370285591426 109836.26863042462 0.010242949662946319 0.02132236163057089 1.9464041067463144e-07 6.710766987752032 -0.03811674725866987 SESVVSGLDS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 SESVVSGLDSPAK 13 0 O14578-4;H7BYJ3;O14578;O14578-2 O14578-4 CIT Citron Rho-interacting kinase 1 SESVVS(0.001)GLDS(0.999)PAK;SESVVS(0.001)GLDS(0.999)PAK 221.03 3.926599999999999e-39 83292000.0 24465.0 27750.0 26099.0 22942.0 33686.0 26775.0 25067.0 25521.0 38553.0 38176.0 37235.0 True False 28594.093888177085 29162.35647016669 29800.23064772182 28562.791029905507 28730.83402357437 29608.31272819343 29621.349427496385 29138.679904784596 29820.807056490186 29552.015085616502 27988.521866279276 1.0216364417096069 1.0419398569704983 1.0647304202093395 1.0205180240089105 1.0265220207355585 1.0578733978754944 1.058339185220937 1.0410939185713497 1.0654655933230421 1.055861943221122 1.0 14.772547676660402 -5.248902430876539 21.80051976981818 1.03719543887823 1.0216363850410175 0.01275962307317735 0.020435525462818606 1194.1572244885604 2076266.7376731418 0.003587581435002291 0.07572071400434385 5.637642975684837e-06 5.248902430876539 -0.015559053837212566 SESVVSGLDS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 SESVVSGLDSPAK 13 0 O14578-4;H7BYJ3;O14578;O14578-2 O14578-4 CIT Citron Rho-interacting kinase 1 SESVVSGLDS(1)PAK;SESVVS(0.022)GLDS(0.978)PAK 231.92 1.2186999999999999e-46 143697000.0 38840.0 38215.0 35952.0 37578.0 43083.0 36899.0 37502.0 38127.0 39665.0 40692.0 42253.0 True False 42783.008207503226 41435.51216555416 38391.91891693871 39899.10771416993 40056.998708281295 36598.50677782446 38929.15913188181 37366.527074947095 37998.017988753105 38122.70017545986 37056.14886383532 1.1545454538384854 1.1181818250409947 1.0360471903869921 1.076720299801828 1.0809811579576913 0.9876500364975194 1.0505451949399536 1.0083758895791433 1.0254173505287538 1.028782033328494 1.0 15.17742533366836 -2.0000000000006293 0.31210021396990417 1.007929564152165 2.370548302690014 0.7311233114863732 0.02549640875817417 15.72883544700804 0.19662116869727675 0.007279146505036142 12.333423016511182 0.00999999999998551 2.0000000000006293 1.3626187385378488 SESVVSGLDS(ph)PAKTSSMEK ddPTM_A549_PD325901_60min_R1 4 SESVVSGLDSPAKTSSMEK 19 1 O14578-4;H7BYJ3;O14578;O14578-2 O14578-4 CIT Citron Rho-interacting kinase 1 SESVVS(0.003)GLDS(0.551)PAKT(0.128)S(0.159)S(0.159)MEK;SES(0.002)VVS(0.092)GLDS(0.874)PAKT(0.011)S(0.011)S(0.011)MEK;SESVVS(0.012)GLDS(0.987)PAKT(0.001)SSMEK;SESVVSGLDS(1)PAKTSSMEK 155.76 5.503700000000001e-27 41051400.0 15362.999999999998 17430.7 18713.9 20678.6 20275.8 23690.199999999997 21700.800000000003 22715.1 21858.300000000003 21794.9 20854.9 True False 16922.640450357147 18899.64626204696 19983.937789822503 21955.870157491976 18851.69775571269 23497.274865660773 22526.635819133407 22262.029510848784 20939.671665285816 20418.766294459096 18289.879510103397 0.9252461417807054 1.0333390250934527 1.0926227140415716 1.200438206570113 1.0307174383133 1.284714579594731 1.231644845264815 1.217177483238813 1.1448775074608153 1.116396982450305 1.0 14.158757950494532 -5.424543391237081 2.0736079728226544 1.1126340431338713 0.9057551845154602 0.3325545805253365 0.08692732328407929 0.5876783303020539 3.522024720985482 0.014769956910762164 0.1991506947722021 3.762327602164138e-06 5.424543391237081 -0.20687885861841104 SESVVY(ph)ADIR ddPTM_A549_MK2206_60min_R1 4 SESVVYADIR 10 0 O95297-4;O95297-2;O95297;O95297-5 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 SESVVY(1)ADIR;SESVVY(1)ADIR;SESVVY(1)ADIR;SESVVY(1)ADIR 207.68 2.5789e-21 126712000.0 5129.139999999999 5193.28 4126.47 4257.6900000000005 5831.950000000001 4261.79 4124.900000000001 4272.16 6385.6 6065.0 6052.040000000001 True False 5994.81343656671 5457.595769707652 4711.665495264361 5300.824241134965 4974.077880537452 4712.769789052755 4874.340936429564 4877.751762941285 4939.271795707827 4694.912287674565 4549.151440193282 1.3177871775383247 1.1996953369122776 1.0357240371545369 1.1652336289138236 1.093407846700772 1.0359667843575948 1.0714835503964812 1.0722333224268397 1.0857567308196645 1.0320413266952244 1.0 12.151381747073406 -2.0000000000000004 0.48579926025256054 1.0445718283585554 8.808186375605723 0.7679427742485279 0.042668044568456194 31.94106370877928 0.31436797091751756 0.008856159636032354 253.098483622758 0.00999999999999999 2.0000000000000004 7.763614547247168 SESVVY(ph)ADIR ddPTM_A549_PD325901_60min_R1 4 SESVVYADIR 10 0 O95297-4;O95297-2;O95297;O95297-5 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 SESVVY(1)ADIR;SESVVY(1)ADIR;SESVVY(1)ADIR;SESVVY(1)ADIR 244.8 6.3302e-46 166471000.0 18864.68 19055.25 18079.6 19994.21 20605.58 19016.93 19376.36 19033.99 21740.05 20933.14 21316.019999999997 True False 20779.808426156582 20661.10279190568 19306.590377466746 21229.206941554454 19158.31514619192 18862.062427123048 20113.73798295103 18654.3421375737 20826.391301560343 19611.417967927984 18694.284673383903 1.1115594305537646 1.1052095949582947 1.032753631111364 1.1355987839309873 1.0248220502102807 1.0089748153871874 1.0759298007047084 0.9978633824985521 1.1140512549919623 1.049059555397156 1.0 14.190309647862096 -11.080231223812667 1.3944903781560438 0.999907812625252 1.0709395782650883 0.0777739362490052 0.04646812855519214 0.49019453116492523 1.6984755574178831 0.03246232753567986 0.007097666830989955 8.313210475366402e-12 11.080231223812667 0.07103176563983638 SET(ph)PPHWR ddPTM_A549_MK2206_60min_R1 1 SETPPHWR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(0.015)ET(0.985)PPHWR 61.56 0.009593899999999999 34395000.0 453.14 435.62 417.28 494.28 820.43 630.01 467.24 437.13 889.79 530.81 898.26 True False 529.6189537906627 457.7911973165414 476.4565785923348 615.3786221890725 699.7458338170492 696.6772400332078 552.1314599474771 499.0945161544801 688.2539857026541 410.89965233644455 675.1972512851889 0.7843914541751635 0.6780110500230401 0.7056553883852967 0.9114056981389423 1.0363576458362853 1.0318129090530703 0.8177335717770399 0.7391832760048859 1.0193376593174996 0.6085623890712335 1.0 9.399165220648468 -4.3767995508456625 0.27586166398107925 1.0118337077611859 0.2334539310320377 0.0 0.16124267345154278 9.626636821390056 0.36499664267949794 0.05021427030059795 2.773496267047218 4.199527689857486e-05 4.3767995508456625 -0.7783797767291482 SET(ph)PPHWR ddPTM_A549_PD325901_60min_R1 2 SETPPHWR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(0.007)ET(0.993)PPHWR;S(0.025)ET(0.975)PPHWR 87.258 0.0024171999999999996 72975000.0 2624.6 2000.6999999999998 2226.1000000000004 2438.5 2943.7 2872.0 2395.1 1823.48 3475.2 2599.2 2835.5 True False 2891.0474598715987 2169.3060104572614 2377.1765326267587 2589.1206067646854 2736.944667213694 2848.611384208565 2486.24684114901 1787.1092609076145 3329.149429333538 2435.086068417753 2486.7514757154536 1.162579971542925 0.8723453194425627 0.9559365122897255 1.0411658068966378 1.100610452609165 1.1455151075718182 0.9997970707682807 0.7186521364759428 1.3387543796976018 0.9792237351411096 1.0 11.280046617440622 -8.790104997654332 24.999994717529002 1.1599672726512147 1.00350558848034 0.0602441883766901 0.14989784533139522 286.6776198584764 250017.28318957065 0.028681212462783816 0.03053613278199699 1.6214180461585765e-09 8.790104997654332 -0.15646168417087458 SET(ph)PPVPPPPPYLASYPGFPENGAPGPPISR ddPTM_A549_PD325901_60min_R1 1 SETPPVPPPPPYLASYPGFPENGAPGPPISR 31 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.167)ET(0.833)PPVPPPPPYLASYPGFPENGAPGPPISR 74.39699999999999 1.5142999999999999e-05 4730100.0 1145.8 1031.1 1229.2 1241.0 1560.0 1335.0 1630.3 1421.0 1702.6 1530.4 1626.3 True False 1262.1207725066222 1117.9944156457643 1312.620903780069 1317.6537514845086 1450.4309817078383 1324.1282026178394 1692.3419586343916 1392.6570402470652 1631.0456429509893 1433.770282820302 1426.2754099650997 0.8849067744479348 0.7838559143869144 0.9203137729284615 0.9238424376374482 1.0169361201728422 0.9283818492322182 1.1865464038784785 0.9764292579938281 1.143569910520227 1.0052548566727275 1.0 10.478036873895824 -6.668571409065606 0.8978299700716957 1.0668648349728251 0.832751678409157 0.5353441860515549 0.07373763217543551 0.34712356076446754 0.5074818667296164 0.01240338304999005 0.04907578668518972 2.1450063931768281e-07 6.668571409065606 -0.23411315656366816 SET(ph)SPVAPR ddPTM_A549_MK2206_60min_R1 1 SETSPVAPR 9 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7;H0Y8T6 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 S(0.009)ET(0.496)S(0.496)PVAPR 148.73 2.7348000000000003e-05 78222000.0 2776.3 3116.3 2808.8 2545.6 3324.1 2610.0 2919.9 2724.9 4124.9 3766.7 4467.0 True False 3244.8715659818545 3274.9063592065067 3207.130075609067 3169.2721142763266 2835.1292934086428 2886.188467622217 3450.408034202207 3111.1629196562662 3190.616736111754 2915.799853913236 3357.7206170718287 0.9663911730725272 0.9753361678025667 0.955150961429874 0.9438760622794631 0.8443612845553176 0.8595677832598172 1.02760426721006 0.9265699188425693 0.950232940730548 0.8683866784771452 1.0 11.713266478864002 -10.057183354241314 0.5887870321154024 1.000729316104629 0.9349506304912486 0.0 0.06178280542761939 1.1310455203057197 0.7552768720113708 0.03529381064770499 0.012025913811252264 8.766306394183105e-11 10.057183354241314 -0.0657786856133803 SET(ph)SPVAPR ddPTM_A549_PD325901_60min_R1 2 SETSPVAPR 9 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7;H0Y8T6 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 S(0.002)ET(0.499)S(0.499)PVAPR;SET(0.5)S(0.5)PVAPR 179.53 2.4971000000000002e-08 190076000.0 7223.3 7769.799999999999 6242.2 6996.5 8327.6 7776.5 7594.1 7797.5 7979.1 8391.0 9097.1 True False 7956.604098487585 8424.588314115468 6665.833229397941 7428.657914795617 7742.698104660384 7713.170762290357 7883.097631150973 7641.97274547959 7643.766175067683 7861.190827982982 7978.214371268223 0.9972913396688785 1.0559491036559212 0.8355044022636778 0.9311178628576701 0.9704800779161815 0.9667790815533408 0.9880779412922531 0.9578550274357716 0.9580798182855326 0.9853321134480072 1.0 12.961850173217588 -6.982818421307944 23.221594998847962 0.9773353037114252 0.9532899605741302 0.03565654675355978 0.050806935003320244 308.2826265479128 416649.34563849535 0.007449632314990327 0.014075217749310443 1.0403550477612935e-07 6.982818421307944 -0.024045343137295005 SETAPAAPAAPAPAEKT(ph)PVK ddPTM_A549_MK2206_60min_R1 6 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK 163.16 1.5567000000000001e-27 4366032900.0 35740.7 40496.09999999999 36154.799999999996 39041.200000000004 45845.8 35275.7 36244.4 35682.600000000006 61504.200000000004 55396.5 57703.1 True False 41772.8563837797 42557.17851717182 41282.09429565316 48606.29575262609 39101.943551564014 39008.55115988545 42829.538324887304 40740.71782337945 47573.5969020254 42882.39217545986 43373.82774545721 0.9630889998670871 0.9811718432350965 0.9517742943491279 1.1206365285046096 0.9015100945445007 0.8993568976390616 0.9874512015917961 0.9392926550653915 1.0968272660004754 0.9886697671028396 1.0 15.404537146377656 -8.751540985019652 24.994343305181264 1.0457239883544067 0.969158279295112 0.14400771650458954 0.061836696209819846 220.39889979578402 556526.664826867 0.01082610782757591 0.012204618172928273 1.771980812765337e-09 8.751540985019652 -0.07656570905929472 SETAPAAPAAPAPAEKT(ph)PVK ddPTM_A549_PD325901_60min_R1 7 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK 147.22 1.8233e-21 8267311300.0 57317.1 58861.6 63467.5 66753.2 77744.7 67662.0 66637.1 68678.7 79157.7 74552.1 81376.7 True False 63135.88979738113 63822.07360680317 67774.78621108155 70876.3935564832 72284.18047665466 67110.98310526465 69173.0113057202 67308.84945110226 75830.97714731672 69844.86768285907 71367.88178940346 0.8846541079036958 0.8942688504491852 0.9496538850778193 0.9931133134317961 1.012839090418223 0.9403527388314492 0.9692456826705321 0.9431252233283477 1.0625364694314905 0.9786596705918975 1.0 16.12298733324042 -2.226729835261086 0.27753712943834263 1.0261047933050504 3.369218883690712e-09 0.4193878672399096 0.03760063310936003 22.36368226315302 0.31180276913211624 0.016054783880799776 11.023388235840615 0.005932942847142624 2.226729835261086 -1.0261047899358315 SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_A549_MK2206_60min_R1 4 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK 144.76 2.3390000000000002e-21 1892037000.0 12401.800000000001 12198.099999999999 12940.8 11624.699999999999 16193.9 12833.8 12884.0 12831.100000000002 19800.5 18593.100000000002 18761.199999999997 True False 14494.92064510095 12818.931187702357 14776.000029351258 14472.752021852612 13811.79876192961 14191.864197613026 15224.856026802701 14649.94771859573 15315.718364901151 14392.90579653124 14102.276257221385 1.0278426248867805 0.9089973103553505 1.0477741153159497 1.0262706358799003 0.9794020844583136 1.0063527290741994 1.0796027356935711 1.0388356781121697 1.0860458329951093 1.0206086970648467 1.0 13.783640427276994 -7.582853955194318 10.139116690944672 1.0441390116147156 0.9969834450021244 0.24108630063882042 0.04043456743390704 0.5196729513291602 84.67900989524438 0.006841759155062135 0.010151447103269415 2.6130399212813118e-08 7.582853955194318 -0.04715556661259113 SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_A549_PD325901_60min_R1 5 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK 160.33 2.4303e-27 2707299300.0 9848.300000000001 12053.5 10959.179999999998 13759.399999999998 12084.199999999999 11446.300000000001 12063.1 12965.499999999998 14375.0 12259.8 13496.300000000001 True False 10848.092166064722 13069.290746761926 11702.935857702938 14609.286888135335 11235.44748022684 11353.085127808668 12522.167871681608 12706.892931262013 13770.86874040907 11485.714135729448 11836.340660094673 0.9165072616267496 1.1041664921679766 0.9887292190869853 1.2342739456113696 0.949233196549192 0.9591718803840055 1.0579425036235355 1.0735491057723898 1.163439709608605 0.9703771178581116 1.0 13.530935503799252 -7.9953545094112926 24.759954317365686 1.078429854096805 1.0312401391940735 0.0 0.09463225313207867 316.72850713883065 1688111.6489783134 0.014991600583798517 0.02066681484127416 1.0107540509328613e-08 7.9953545094112926 -0.04718971490273138 SETAPAET(ph)ATPAPVEKS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 2 SETAPAET(0.944)AT(0.056)PAPVEKS(1)PAK 172.52 1.0509e-34 40958000.0 7420.7 6932.1 8619.4 8049.5 8208.5 8942.4 8198.3 8082.4 8733.0 9154.2 9226.1 True False 8174.04400116939 7516.292395207066 9204.364316662806 8546.699333259105 7631.963277787689 8869.576059243267 8510.290792781894 7921.190191479855 8365.982379825553 8576.202249734453 8091.348189066592 1.0102202760492425 0.9289295454326675 1.1375563257925514 1.0562763007539095 0.9432251708189192 1.0961802473447197 1.0517766129853858 0.9789703775426866 1.03394170963129 1.0599225307499458 1.0 12.98216439073272 -2.0196585815120662 22.935332063294172 1.0207833812381515 0.005142324434694867 0.0 0.060294888174453845 0.0 0.0 0.007170878101446376 0.0 0.00955743643964914 2.0196585815120662 -1.0156410568034566 SETAPAETAT(ph)PAPVEKS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 2 SETAPAET(0.021)AT(0.979)PAPVEKS(1)PAK 126.47 1.2109000000000002e-15 42235000.0 6680.4 7510.5 7315.1 8039.1 8429.5 7448.2 7988.8 7582.4 7577.6 7743.8 8390.3 True False 7358.58929014945 8143.436193102041 7811.5466752697575 8535.656948879225 7837.4410001963 7387.544328642841 8292.818155639095 7431.163083722272 7259.139823813825 7254.855146434826 7358.346290493864 1.0000330236776027 1.1066937966241712 1.0615899778135442 1.1599966367315862 1.0651090191720618 1.0039680163172937 1.1269948203378877 1.00989580951395 0.9865178312132167 0.9859355431270288 1.0 12.845165857116275 -8.431119931163046 6.730920641369087 0.9938501308465767 1.0756722294464072 0.42430832257542805 0.04476663404041224 0.17130557126914314 10.739497126735777 0.00693177509469606 0.008374380642219782 3.7057837180076487e-09 8.431119931163046 0.08182209859983047 SETAPAETATPAPVEKS(ph)PAK ddPTM_A549_MK2206_60min_R1 4 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETAT(0.001)PAPVEKS(0.999)PAK;SETAPAETATPAPVEKS(1)PAK 285.13 1.4101999999999996e-127 5071235200.0 69689.6 71452.91 68803.94 65905.13 88349.48 71379.47 70276.06 70161.79 97883.0 95701.02 97838.54 True False 81451.50073286358 75089.55791894546 78561.37328909205 82051.88980859374 75353.38852784863 78932.79813754262 83044.31043394515 80107.43859397023 75712.65678703164 74082.09311475517 73542.53031166483 1.107542810774683 1.0210358224108487 1.0682440889123332 1.1157066456765523 1.0246232786458338 1.073294565784376 1.1292011585950723 1.089266826345029 1.0295084553954026 1.0073367451569009 1.0 16.16629119445469 -8.932300505175041 3.232900728819218 1.0120011029328708 1.0772000237322596 0.457433973918415 0.03243088660932344 0.16228586390446523 3.2620967928852993 0.00600048988945461 0.006210697053751274 1.1686904489904463e-09 8.932300505175041 0.06519892079938883 SETAPAETATPAPVEKS(ph)PAK ddPTM_A549_PD325901_60min_R1 8 SETAPAETATPAPVEKSPAK 20 1 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAK;SETAPAETAT(0.045)PAPVEKS(0.955)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETAT(0.001)PAPVEKS(0.999)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETATPAPVEKS(1)PAK;SETAPAETAT(0.003)PAPVEKS(0.997)PAK 297.64 1.1286999999999997e-144 8765965400.0 113557.09999999999 113552.4 117716.29999999999 120074.00000000001 130289.00000000001 115556.09999999999 124227.70000000001 127846.3 131514.4 122408.00000000001 131645.40000000002 True False 125085.33319568116 123121.85926018243 125705.23600361674 127490.69827216015 121137.95011264906 114615.04943410285 128955.25310350562 125296.3052530181 125987.30712164564 114679.13798972011 115453.8503689475 1.0834227944408525 1.0664162248961886 1.0887920636852702 1.1042567906115506 1.049232656386403 0.9927347513126313 1.1169419875683024 1.0852501224741988 1.091235214062044 0.9932898523803952 1.0 16.816956762018805 -10.790694490284729 0.9852612913090077 0.9989989817624121 1.0754379871178323 0.4776387218120388 0.031512537228379586 0.43208979671154385 0.7290328125308456 0.02355466110832559 0.005612284638111535 1.6192186961050337e-11 10.790694490284729 0.07643900535542025 SETAPAETATPAPVEKS(ph)PAKK ddPTM_A549_MK2206_60min_R1 4 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAETAT(0.012)PAPVEKS(0.988)PAKK;SETAPAETATPAPVEKS(1)PAKK 215.68 7.406199999999999e-68 1740534000.0 11107.999999999998 13472.199999999999 14314.0 10680.4 15998.1 11570.900000000001 12312.400000000001 12039.2 17733.7 17551.6 17710.3 True False 12982.758835473986 14157.877435581264 16343.940438004907 13297.098479461372 13644.800682554915 12795.324957858207 14549.403705712959 13745.793468503689 13717.04526489975 13586.681369884393 13312.343730585897 0.9752421585723728 1.0635150144938568 1.2277282474650755 0.9988548033739921 1.0249735853203052 0.9611624531944883 1.0929257837810216 1.0325599869331736 1.0304004721110098 1.0206077641060445 1.0 13.700476969644207 SETAPAETATPAPVEKS(ph)PAKK ddPTM_A549_PD325901_60min_R1 8 SETAPAETATPAPVEKSPAKK 21 2 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETATPAPVEKS(1)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAETAT(0.001)PAPVEKS(0.999)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAETAT(0.001)PAPVEKS(0.999)PAKK;SETAPAETATPAPVEKS(1)PAKK;SETAPAET(0.004)AT(0.015)PAPVEKS(0.981)PAKK 246.21 3.5623999999999997e-87 2581118000.0 39601.270000000004 38316.98 37872.810000000005 41280.8 45836.700000000004 44486.6 46845.79 46560.310000000005 44977.600000000006 45709.899999999994 46456.1 True False 43621.56177748587 41546.08637805303 40443.086634307554 43830.62126050096 42617.28832003057 44124.31587908521 48628.532173449894 45631.62809119339 43087.34788581723 42823.76911309965 40742.29420948146 1.0706702365163903 1.0197286918708792 0.9926560940914252 1.0758015008958624 1.046020827911865 1.0830100939386151 1.1935639147717207 1.1200063466375465 1.0575582136901371 1.051088799587869 1.0 15.314239600684148 -4.872116622790396 16.70539731165762 1.0489373704865337 4.046694852212717 0.0 0.05588406649102904 655.9804021067822 86815.36487171584 0.008545712877881428 985.2772032620354 1.342404431637215e-05 4.872116622790396 2.9977574817261834 SETAPAETATPAPVEKS(ph)PAKKK ddPTM_A549_MK2206_60min_R1 4 SETAPAETATPAPVEKSPAKKK 22 3 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAET(0.009)AT(0.041)PAPVEKS(0.95)PAKKK;SETAPAETAT(0.005)PAPVEKS(0.995)PAKKK;SETAPAET(0.008)AT(0.063)PAPVEKS(0.929)PAKKK;SETAPAETATPAPVEKS(1)PAKKK 87.65899999999999 6.735e-07 34316000.0 1207.52 2159.3900000000003 2060.28 2140.09 2942.87 1708.77 1766.61 1379.63 3195.27 2921.25 3263.8900000000003 True False 1411.319854970431 2269.2937274995784 2352.4586841981786 2664.412146072292 2509.9777213963157 1889.5909072102745 2087.5801696297685 1575.196777439675 2471.5464467976913 2261.337596103761 2453.3760342186174 0.5752562327527285 0.9249677570207178 0.9588659265384157 1.0860186571117656 1.023070938326715 0.7702002794741147 0.8509010198653252 0.6420527287580535 1.007406289262486 0.9217248251240787 1.0 11.260552660475662 SETAPAETATPAPVEKS(ph)PAKKK ddPTM_A549_PD325901_60min_R1 2 SETAPAETATPAPVEKSPAKKK 22 3 P16401 P16401 HIST1H1B Histone H1.5 1 SETAPAETAT(0.013)PAPVEKS(0.987)PAKKK;SETAPAET(0.006)AT(0.149)PAPVEKS(0.845)PAKKK 133.1 1.2632e-22 19718300.0 1368.0 1008.0999999999999 1471.17 1846.77 1448.05 3341.6000000000004 2206.56 2068.6000000000004 1758.17 1257.54 1640.47 True False 1506.8783529316265 1093.056124927258 1571.0124430638828 1960.8407885810198 1346.3439635013049 3314.3871175039476 2290.531848275962 2027.3401502146937 1684.28022910087 1178.1387097868808 1438.7025897961312 1.047386974638835 0.75975127359863 1.091964700839595 1.3629229574535466 0.9358042260089948 2.3037333365567982 1.592081549391343 1.4091447145458842 1.1706938188938256 0.8188896844578746 1.0 10.49055267203403 -5.9822432738286695 6.692953501925783 1.2342713979160411 0.9063207163188943 0.12412320261461118 0.39091298668570906 0.2911487863896735 54.27932617135898 0.055694444309426674 0.1708411985816267 1.0417337297235057e-06 5.9822432738286695 -0.3279506815971468 SETAPLAPTIPAPAEKT(ph)PVK ddPTM_A549_MK2206_60min_R1 2 SETAPLAPTIPAPAEKTPVK 20 1 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPTIPAPAEKT(1)PVK;SETAPLAPT(0.001)IPAPAEKT(0.999)PVK 153.24 2.0451999999999998e-22 120770000.0 13499.0 12574.1 13109.8 11918.599999999999 16293.9 13189.7 13656.9 13304.4 18535.8 19151.2 19379.0 True False 15777.301181136423 13214.067981676508 14968.966770585206 14838.657535046279 13897.088894398805 14585.425299385728 16138.181952223067 15190.339443016182 14337.470895590255 14824.930618913952 14566.659466808816 1.0831104562501883 0.9071447034088848 1.027618364024578 1.018672645492759 0.9540340340943868 1.0012882728960384 1.1078848921398263 1.0428155801698025 0.9842662230320697 1.0177302938050845 1.0 13.830382445473953 -4.970730784037482 16.214282152965044 1.0005715870444105 1.3292301149000116 0.16427491916375736 0.0484442791348858 33599399.58000909 508700677.7521139 0.0063842600774790285 300317003.06747615 1.069717783941318e-05 4.970730784037482 0.3286585278556011 SETAPLAPTIPAPAEKT(ph)PVK ddPTM_A549_PD325901_60min_R1 1 SETAPLAPTIPAPAEKTPVK 20 1 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPT(0.002)IPAPAEKT(0.998)PVK 149.99 1.0797999999999999e-21 87331000.0 11173.0 12137.0 11330.0 12764.0 13760.0 14096.0 12991.0 13814.0 14153.0 14889.0 14151.0 True False 12307.274734872131 13159.827584805198 12098.921932824753 13552.403290852752 12793.545069422982 13981.206849513912 13485.379613947976 13538.468933126647 13558.19862838328 13948.90599902736 12410.516710579923 0.991681089666494 1.0603770891816688 0.9748926829541644 1.0920095920985606 1.0308632080174815 1.1265612202588617 1.0866090371927655 1.090886805831795 1.0924765619810948 1.12395852036813 1.0 13.599275562727028 -5.257520927410861 22.923795363821856 1.0539531187883937 0.9916810158334575 0.11677231822849665 0.047931251248162186 209.77235897649342 1227033.979767043 0.006667259283081476 0.06843472592484415 5.526867749053885e-06 5.257520927410861 -0.06227210295493624 SETAPLAPTIPAPAEKT(ph)PVKK ddPTM_A549_MK2206_60min_R1 2 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPT(0.001)IPAPAEKT(0.999)PVKK 118.67 3.7033e-15 28307000.0 5447.0 5592.0 5988.6 5245.8 7960.1 6433.3 6541.200000000001 6140.4 7841.799999999999 8183.2 8713.5 True False 6366.320433635832 5876.608914636834 6837.873529903321 6531.021235492911 6789.17983468071 7114.0675359210745 7729.651369335759 7010.8205041863275 6065.6448207813855 6334.609436520771 6549.697469634067 0.9720022127970928 0.8972336419937212 1.0439983772693786 0.9971485348403124 1.0365638819436989 1.086167348782682 1.1801539544646504 1.070403715086099 0.9260954187431003 0.9671606155688115 1.0 12.677212554802479 -4.3429751857831045 18.811960232446033 0.9975353234157857 1.010887017659475 0.0 0.07801044260636152 0.0 0.0 0.011470977672589464 0.0 4.539675541833968e-05 4.3429751857831045 0.013351694243689427 SETAPLAPTIPAPAEKT(ph)PVKK ddPTM_A549_PD325901_60min_R1 2 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPT(0.005)IPAPAEKT(0.995)PVKK 125.05 9.1302e-16 37989000.0 7789.8 7307.5 9250.3 8616.5 10470.4 10710.1 9289.8 9097.0 10140.1 8838.8 9504.599999999999 True False 8580.614761452329 7923.32867067348 9878.080984572707 9148.721635508677 9734.995224919068 10622.880496522332 9643.328422573619 8915.553198541556 9713.946860147618 8280.716659560956 8335.594454623555 1.0293944610864396 0.9505415257190923 1.1850481736300849 1.0975487933477976 1.16788254010118 1.2743998708610487 1.1568855076946185 1.0695761708508158 1.1653574214805429 0.9934164509368424 1.0 13.025069373634565 -5.750783182083972 24.99198550384041 1.109945828878122 0.9899679726845841 0.2766869742408935 0.08083396792209853 249.61926007227225 585419.79405965 0.012341460476319632 0.04679836678570032 1.7750754514034161e-06 5.750783182083972 -0.11997785619353796 SETDLLDIR ddPTM_A549_MK2206_60min_R1 2 SETDLLDIR 9 0 H0Y6E1;P50995-2;P50995 H0Y6E1 ANXA11 Annexin A11 0 ; 87.616 0.0031631 2377200.0 564.71 930.97 659.73 666.96 957.1299999999999 836.2 365.42 791.46 1013.73 1267.2800000000002 1094.4 False True 660.0192421660529 978.3523965056252 753.2896342856625 830.3652299409723 816.3374449024444 924.6861289753633 431.81208392690536 903.6518787445955 784.1217735941644 981.000567835816 822.6302760965768 0.802327924639339 1.1892978230122502 0.915708619259749 1.0094027099040146 0.9923503530358836 1.1240604143127904 0.5249163524297646 1.0984909077653577 0.9531885664540123 1.192516974321337 1.0 9.684100359559281 SETDLLDIR ddPTM_A549_PD325901_60min_R1 2 SETDLLDIR 9 0 H0Y6E1;P50995-2;P50995 H0Y6E1 ANXA11 Annexin A11 0 ; 105.57 0.0015593 3974700.0 1318.5900000000001 1365.17 1134.1799999999998 1712.6100000000001 1729.8200000000002 1158.12 1258.02 1030.19 1490.87 1718.1599999999999 1566.9 False True 1452.4522861053467 1480.2176669645319 1211.1522751783918 1818.3940300804873 1608.323410755034 1148.6886546934622 1305.8946395149578 1009.6420522815799 1428.2139185400817 1609.6750843769796 1374.1812333974756 1.056958318746907 1.0771633544324395 0.8813628404631776 1.3232563404935724 1.17038667947653 0.8359076858104708 0.9503074323656069 0.7347226317342275 1.0393199119806182 1.171370300551462 1.0 10.424356570682326 -7.237447043569643 24.67751374567684 0.9782416888069969 1.100509167397811 0.19631433714373037 0.1435933237744416 992.1111007515462 1020443.7414184202 0.02002378129675189 0.03466996280221901 5.788325649714616e-08 7.237447043569643 0.122267478590814 SETDT(ph)SLIR ddPTM_A549_MK2206_60min_R1 1 SETDTSLIR 9 0 P40227-2;P40227 P40227-2 CCT6A T-complex protein 1 subunit zeta 1 S(0.018)ET(0.018)DT(0.482)S(0.482)LIR 55.06399999999999 0.019556 7629400.0 505.98 466.64 450.82 428.19 712.58 712.67 617.11 550.24 711.92 862.05 997.43 True False 591.377053976695 490.3899828194087 514.7530549295353 533.0965692221797 607.760425949018 788.0842663679409 729.2308989987747 628.238205039327 550.6712567026302 667.3123062802736 749.7406033324273 0.788775546299824 0.6540795318270562 0.6865748668827252 0.711041347971133 0.8106276000628223 1.0511425723311298 0.9726442662402282 0.8379407521040615 0.7344823719764157 0.8900575790002854 1.0 9.55024772536069 -6.906377315946171 4.083332277808445 0.8892086885000352 0.7050288622289402 0.5367952962703779 0.08674289205294429 0.19298016859675593 6.042673299495897 0.01690842389601209 0.03289089207083964 1.240574025968106e-07 6.906377315946171 -0.18417982627109497 SETDT(ph)SLIR ddPTM_A549_PD325901_60min_R1 1 SETDTSLIR 9 0 P40227-2;P40227 P40227-2 CCT6A T-complex protein 1 subunit zeta 1 SET(0.002)DT(0.624)S(0.374)LIR 61.65 0.0079871 9113300.0 898.47 675.16 602.84 703.45 795.35 673.99 768.86 628.54 578.71 697.6 858.97 True False 989.6820129813439 732.0581026742261 643.7523475714099 746.9005088491358 739.4873598085445 668.5012489006723 798.119388036336 616.0032766199087 554.3888312182355 653.5534169468389 753.3221354594607 1.3137567136238792 0.9717729882286475 0.8545512168957802 0.9914755901784191 0.9816349805751052 0.8874042291256249 1.0594662634591945 0.8177156194198388 0.7359253168368758 0.8675616793713733 1.0 9.557123111576296 -5.2708736925530335 3.0109361265571146 0.8960537482734928 1.3770887618931815 0.6198824016992479 0.08974214280338075 0.21922812356161706 2.934302149985375 0.015631952131826877 0.24899172256365795 5.359525078701325e-06 5.2708736925530335 0.4810350136196887 SETDTS(ph)LIR ddPTM_A549_MK2206_60min_R1 1 SETDTSLIR 9 0 P40227-2;P40227 P40227-2 CCT6A T-complex protein 1 subunit zeta 1 SETDT(0.104)S(0.896)LIR 86.882 0.0011628 8336800.0 570.95 631.87 405.33 453.31 804.53 606.19 637.1 583.63 1045.6 780.74 868.74 True False 667.3124016126995 664.0294840650174 462.81188890153186 564.3709703498589 686.1847027544462 670.3366234436448 752.8528232440242 666.3613397919133 808.7732694800964 604.3702917525209 653.0078819957421 1.021905584926846 1.0168782067922224 0.7087385951408005 0.8642636420023164 1.0508061566689029 1.026536802886578 1.152900055269062 1.0204491525513597 1.2385352333088224 0.925517606166447 1.0 9.350956595401778 -6.9604378909320515 2.710815526331153 1.1053219468135531 0.8982697452195048 0.2510101869287884 0.1147803550858721 0.220396852876129 3.287206621160574 0.017750338416562712 0.03525310799080175 1.0953731950353164e-07 6.9604378909320515 -0.20705220159404836 SETDTSLIR ddPTM_A549_MK2206_60min_R1 1 SETDTSLIR 9 0 P40227-2;P40227 P40227-2 CCT6A T-complex protein 1 subunit zeta 0 54.549 0.054099 1817000.0 796.58 868.89 630.39 747.58 1222.3 798.44 1086.3 766.15 1317.0 1122.6 1455.4 False True 931.0232294888247 913.1127896707438 719.7887811033889 930.7371335601418 1042.501289171019 882.9303908384226 1283.666648705043 874.7541087359709 1018.7016028168388 869.0038803204396 1093.9840130034338 0.8510391545236432 0.8346673980763901 0.6579518279497286 0.8507776370560366 0.9529401497458142 0.8070779648912942 1.1733870270927018 0.7996041060366257 0.9311850911057521 0.7943478789371595 1.0 10.095375940041926 -6.638669336314745 3.597901071216897 0.9568145850750471 0.782163874788196 0.18846640813875692 0.11540374258495253 0.18487903877221334 4.608826297577904 0.014121619305905239 0.0308503100919954 2.297897558401108e-07 6.638669336314745 -0.17465071028685109 SETILS(ph)PPPEKR ddPTM_A549_MK2206_60min_R1 2 SETILSPPPEKR 12 1 Q9P0M6 Q9P0M6 H2AFY2 Core histone macro-H2A.2 1 S(0.014)ET(0.048)ILS(0.938)PPPEKR;S(0.012)ET(0.062)ILS(0.926)PPPEKR 45.083999999999996 0.022227 20234900.0 5923.799999999999 6756.6 7487.9 7299.3 9440.0 7358.4 6257.8 7050.4 10189.7 9372.8 9416.2 True False 6923.5926169950235 7100.482080228052 8549.79681470846 9087.628827678029 8051.388505092386 8137.061003889398 7394.761257724772 8049.815790944449 7881.749219607251 7255.477970307693 7077.897666100682 0.978199027962117 1.0031908364874413 1.2079571107191027 1.2839446480277437 1.137539547040105 1.1496437766911407 1.044768037992651 1.1373173462931983 1.1135720790873518 1.0250894139170061 1.0 12.789105187753806 -10.510685657882402 0.5968379396422927 0.9884628079801283 1.1243300965922618 0.18693624352379123 0.0832563852732203 1.302551575056729 0.7378072909918045 0.09251554232537208 0.01955807387458497 3.085420367880135e-11 10.510685657882402 0.13586728861213349 SETILS(ph)PPPEKR ddPTM_A549_PD325901_60min_R1 2 SETILSPPPEKR 12 1 Q9P0M6 Q9P0M6 H2AFY2 Core histone macro-H2A.2 1 SETILS(1)PPPEKR;SETILS(1)PPPEKR 97.79700000000001 0.00010575 19705700.0 3416.8 3217.6000000000004 3326.7 3300.6000000000004 3401.1 3326.1 3037.8 3026.2 3152.4 3438.7 3928.7 True False 3763.6710206847815 3488.7584441681834 3552.4698670722055 3504.4705657935274 3162.2184691580314 3299.0133443649397 3153.4051413479433 2965.8400669920265 3019.9155907662966 3221.579895147785 3445.4948060812176 1.0923455795208254 1.0125565820069171 1.0310478079381167 1.017116775102438 0.9177835542160128 0.957486088367412 0.9152256261661625 0.8607878501971294 0.8764824098519076 0.9350122628139714 1.0 11.750495467306882 -6.663510965589047 4.087050645800612 0.9319662835999212 1.0396594914329753 0.6551222795106696 0.040042104296517306 0.15607407797817854 4.815258162690512 0.00779605778387183 0.016678851774137624 2.1701464084118215e-07 6.663510965589047 0.10769320783305414 SETS(ph)PVAPR ddPTM_A549_MK2206_60min_R1 1 SETSPVAPR 9 0 A0A2R8Y661;A0A2R8YGD3;Q9Y4G8;H0Y8H7;H0Y8T6 A0A2R8Y661 RAPGEF2 Rap guanine nucleotide exchange factor 2 1 SET(0.065)S(0.935)PVAPR 159.34 9.695599999999999e-06 86060000.0 2675.7 2369.7 2087.9 2594.6 3210.9 2373.7 2375.8 2741.5 3877.8 4204.3 4162.9 True False 3127.2927454157125 2490.307608192938 2383.9956155170075 3230.27711647602 2738.5808634535106 2624.8833584654612 2807.452107146683 3130.116020491631 2999.4844915741373 3254.545709986837 3129.13703980486 0.9994106060662455 0.795844853234117 0.7618699932891655 1.0323220349203586 0.875187257258728 0.8388521579831975 0.8971969176913268 1.0003128596396762 0.9585660370314725 1.0400777174622553 1.0 11.61154912710719 -8.180357264078358 5.062867320059903 0.9813334527409628 0.8799890189681245 0.3272885616339165 0.07687485774109347 0.213735105144995 9.674578608780152 0.011700043335871296 0.015150914169043558 6.60150164626187e-09 8.180357264078358 -0.1013444337728383 SETSGPQIKELT(ph)DEEAER ddPTM_A549_MK2206_60min_R1 2 SETSGPQIKELTDEEAER 18 1 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 SETSGPQIKELT(1)DEEAER;SETSGPQIKELT(1)DEEAER 146.64 2.9392e-17 39151000.0 15800.2 15338.9 14472.3 14403.2 17206.0 18755.4 14448.1 17768.9 18542.0 21214.6 19977.3 True False 18466.887482198068 16119.584492260912 16524.689758344164 17931.98464658422 14675.020192650374 20740.083979173076 17073.132750764365 20287.695989974007 14342.266605489618 16422.207125820405 15016.385064568834 1.2297824944414015 1.0734663784225325 1.1004439275691043 1.1941612158637795 0.977267173793784 1.381163568328393 1.1369668983148566 1.3510372771302217 0.9551078068269707 1.0936192069667026 1.0 13.874249930277138 -8.79892506735458 24.99998951584498 0.9788008332363384 1.1732113131058255 0.2687233253716428 0.11585705810565915 114.25617969553169 76199.34073639991 0.018030517496221594 0.019194830908038474 1.5888208581819207e-09 8.79892506735458 0.19441047986948712 SETSGPQIKELT(ph)DEEAER ddPTM_A549_PD325901_60min_R1 2 SETSGPQIKELTDEEAER 18 1 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 SETS(0.001)GPQIKELT(0.999)DEEAER;SETSGPQIKELT(1)DEEAER 64.707 0.00094835 289440000.0 28477.0 29439.0 28166.0 28611.0 35247.0 32334.0 30365.0 31128.0 30322.0 31438.0 33578.0 True False 31367.964076340613 31919.927846179482 30077.514135917187 30378.236489704494 32771.37231554885 32070.682624303532 31520.556691365568 30507.1276205564 29047.671787595376 29452.99931475737 29448.118868479436 1.0651941543850576 1.083937754691211 1.0213730211511554 1.0315849588009043 1.1128511285189948 1.0890570894370855 1.0703758984450589 1.035961847234001 0.9864016074278793 1.000165730323887 1.0 14.84588785789057 -8.554019477981605 3.1712188203241194 0.9935911901551832 1.0675033155518532 0.6311765027270082 0.024154702256605126 0.11643717051153955 2.418550769327731 0.004405204242634261 0.005110818299026125 2.7924185992642135e-09 8.554019477981605 0.07391212539667003 SETSGPQIKELT(ph)DEEAERLQLEIDQK ddPTM_A549_MK2206_60min_R1 2 SETSGPQIKELTDEEAERLQLEIDQK 26 2 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 S(0.03)ET(0.029)S(0.029)GPQIKELT(0.911)DEEAERLQLEIDQK;S(0.008)ET(0.008)S(0.008)GPQIKELT(0.976)DEEAERLQLEIDQK 42.45399999999999 0.02247 3117200.0 1674.76 2495.5 2530.0 2213.19 3709.7 2572.7 2512.0 2215.8999999999996 3014.6 4152.7 3774.1 True False 1957.418544049191 2622.510290857695 2888.7920433248837 2755.4216493538734 3164.0080442098747 2844.941406379954 2968.3978841453295 2530.010610909139 2331.7979133269873 3214.6021858245954 2836.886810138972 0.6899882424118648 0.9244324734722936 1.0182965471165093 0.9712836055023613 1.1153099351379754 1.0028392377912982 1.0463575330310464 0.8918264210848793 0.8219566268887402 1.1331443236775174 1.0 11.470092873868335 -5.269389523663666 4.451066485017068 0.9499325138127922 0.6738263077517224 0.39520322242575334 0.09556789913773016 0.15746224452725346 7.692685388500375 0.013392041662762838 0.13449491183623077 5.377872186629822e-06 5.269389523663666 -0.27610620606106984 SETSGPQIKELT(ph)DEEAERLQLEIDQK ddPTM_A549_PD325901_60min_R1 1 SETSGPQIKELTDEEAERLQLEIDQK 26 2 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 SETSGPQIKELT(1)DEEAERLQLEIDQK 71.623 2.7823e-05 4783800.0 1695.1 1158.8 1115.6 1267.8 1740.4 2042.1 1538.1 1715.5 1412.8 1599.7 1810.6 True False 1867.1853041333347 1256.4561428089544 1191.3113246477753 1346.1091266172932 1618.1603080540528 2025.4698146560966 1596.6332371806145 1681.2830067162854 1353.424929144343 1498.6946689934898 1587.9076783390576 1.1758777475567093 0.791265235346176 0.7502396649998444 0.8477250566766675 1.0190518820002428 1.2755589271882144 1.0054950038724442 1.0588040033126471 0.8523322530690309 0.9438172567822809 1.0 10.632911320647835 -5.230336922848387 22.79512972315248 0.945988669264492 1.1758790409976634 0.17023406974551558 0.13942391900124657 5267.900291536482 3860657.3286741716 0.020342557380552014 3.0014627037866934 5.883870114122616e-06 5.230336922848387 0.2298903717331714 SETSWES(ph)PK ddPTM_A549_MK2206_60min_R1 4 SETSWESPK 9 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 SETS(0.004)WES(0.996)PK;SETSWES(1)PK;SETSWES(1)PK;SETS(0.001)WES(0.999)PK 188.49 2.6820999999999996e-11 233601000.0 57639.9 43758.2 28178.4 29181.4 66506.7 57775.5 47532.3 55624.0 72470.8 65889.4 71178.9 True False 67368.10595974403 45985.30547361615 32174.520835425283 36330.84431000281 56723.652530892774 63889.26506172701 56168.30364194309 63508.87234135567 56056.27951208694 51004.93877782427 53503.2146922977 1.2591412749156234 0.8594867754784868 0.60135677866207 0.6790404000758665 1.0601914830186585 1.194120118373457 1.0498117536483103 1.187010401274045 1.0477179704896644 0.9533060596668581 1.0 15.707337956695074 -6.789507155243343 24.817366464029906 1.0531397973203729 0.8327085170911519 0.2798177432263216 0.16797649326143652 192.09851369269552 169851.91253407428 0.024111792719237014 0.04557384116779469 1.62365159969815e-07 6.789507155243343 -0.22043128022922098 SETSWES(ph)PK ddPTM_A549_PD325901_60min_R1 2 SETSWESPK 9 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 SET(0.004)S(0.014)WES(0.982)PK;SETSWES(0.999)PK 189.17 2.3698000000000002e-11 397330000.0 55922.0 43521.0 34736.0 36865.0 35759.0 35684.0 29160.0 25229.0 50105.0 43106.0 53800.0 True False 61599.160272399415 47188.66740696279 37093.39384453667 39142.06732351042 33247.411201852956 35393.40133499248 30269.699756964277 24725.78780323237 47999.26109483107 40384.279803484016 47182.94106629917 1.3055388002592563 1.0001213646401477 0.7861611210800709 0.8295809129089662 0.7046489780095588 0.7501313087978003 0.6415390620612388 0.5240408343449574 1.0173011688140603 0.8559084891876069 1.0 15.525977728807623 -5.322002915135707 3.1898340361136155 0.8911344507821088 1.3398700543906292 0.3622628621176395 0.16427832043374815 0.310583737181395 5.029282454514429 0.02814969814057237 0.3154185408307142 4.764277888455561e-06 5.322002915135707 0.4487356036085204 SETSWES(ph)PKQIK ddPTM_A549_MK2206_60min_R1 2 SETSWESPKQIK 12 1 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 SETSWES(1)PKQIK;SETS(0.001)WES(0.999)PKQIK 124.09 1.9197e-06 65022000.0 10014.5 9858.8 7416.4 7235.8 12333.3 9131.1 7677.0 6206.7 14454.599999999999 15952.8 14772.1 True False 11704.702768982193 10360.570809660518 8468.157039571015 9008.571324827408 10519.08790782372 10097.34694126637 9071.811527302423 7086.518732221559 11180.656179253054 12349.051400299213 11103.779880780556 1.0541187680820088 0.9330670205011491 0.7626373298545372 0.8113067281187979 0.947342978766278 0.9093612310114133 0.8170021042118053 0.6382077822424739 1.0069234350192373 1.1121484334964247 1.0 13.438763253149771 -8.901442152680923 21.259844814575256 1.0033297002755557 0.8576507261625611 0.34429385529640155 0.10781466375570381 4.264221392584043 911.682463245784 0.01789480865532864 0.019050290470850086 1.2547518576356416e-09 8.901442152680923 -0.14567897411299457 SETSWES(ph)PKQIK ddPTM_A549_PD325901_60min_R1 2 SETSWESPKQIK 12 1 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 SETSWES(1)PKQIK;SETSWES(1)PKQIK 146.0 1.9795e-12 104277000.0 13125.9 11446.4 11921.6 11499.0 11444.599999999999 13486.6 12707.5 11456.4 16606.1 13185.2 16838.8 True False 14458.431705223127 12411.028299144296 12730.671466404552 12209.267113876196 10640.770777726619 13376.769601067976 13191.090866310822 11227.893114628068 15908.20336626831 12352.684221799695 14767.734349947936 0.9790555113333347 0.840415192001883 0.8620598911605851 0.826752894151244 0.7205418600832384 0.9058105518477948 0.8932372802573691 0.7602989631695029 1.0772270809654965 0.8364644114717058 1.0 13.850160885894706 -8.770062159015916 24.99977949995872 1.0364683538885238 0.8471111344217969 0.18197543064424726 0.09056102698032603 87.81444694433478 254597.24589543496 0.011825027554582698 0.012684464815456733 1.698000606315209e-09 8.770062159015916 -0.1893572194667269 SETSWES(ph)PKQIKK ddPTM_A549_MK2206_60min_R1 2 SETSWESPKQIKK 13 2 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 S(0.003)ET(0.003)S(0.008)WES(0.987)PKQIKK;S(0.001)ET(0.053)S(0.412)WES(0.534)PKQIKK 62.861000000000004 0.0014004000000000002 18759100.0 6878.3 7604.4 6688.9 6579.0 11063.900000000001 8346.8 6597.6 5497.1 13259.599999999999 14260.7 18090.9 True False 8039.188881710543 7991.431478981468 7637.4866002355 8190.85529534253 9436.414966259712 9230.052835842578 7796.298519282328 6276.330759162706 10256.321771230183 11039.197965513711 13598.430246560276 0.5911850659192119 0.5876730868258049 0.5616447238215163 0.6023382954377698 0.6939341376293527 0.6787586999740151 0.5733234188008136 0.4615481820594921 0.7542283620438117 0.8117994331225162 1.0 13.73115250115662 -9.656492945110497 0.787827071059964 0.971496077729754 0.5976772869695471 0.638464300133263 0.08476207079527823 0.17500629414078028 0.23061999390030075 0.028967395877206956 0.016978293420242662 2.2054999633093036e-10 9.656492945110497 -0.37381879076020685 SETSWES(ph)PKQIKK ddPTM_A549_PD325901_60min_R1 1 SETSWESPKQIKK 13 2 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 S(0.002)ET(0.023)S(0.106)WES(0.869)PKQIKK 42.946999999999996 0.015972 16325000.0 5271.4 5267.6 4555.8 6162.2 4798.3 7529.8 6160.8 5707.9 9305.0 8054.6 12865.0 True False 5806.548647400421 5711.519138643809 4864.983984250929 6542.825098628398 4461.2839612363605 7468.479805297238 6395.252615319117 5594.051456739074 8913.943209009141 7546.031181393363 11282.686557954254 0.5146423786191973 0.5062197827889855 0.4311902098194098 0.5798995713494965 0.39540972252669476 0.6619416188631055 0.5668200195467175 0.49580846086655556 0.790055024857962 0.6688151037993196 1.0 13.461823013097437 -9.1250226214725 0.6336911627890313 0.9783405227471903 0.49129027308284484 0.4783192837438296 0.11996916696063101 0.15655395069871858 0.1399852361324468 0.027041621122884666 0.020958262602779474 7.498551499611149e-10 9.1250226214725 -0.48705024966434546 SEVAAGGGS(ph)WDDRLR ddPTM_A549_MK2206_60min_R1 1 SEVAAGGGSWDDRLR 15 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.015)EVAAGGGS(0.985)WDDRLR 49.993 0.0067345 2563800.0 470.48 434.15 437.32 385.5 882.89 448.78 608.94 389.34 481.69 789.61 898.56 True False 549.8855218683649 456.24638059541866 499.3385519315565 479.94751730575285 753.0180505573104 496.2696017239461 719.5765157529679 444.53013730374346 372.58798410086814 611.2365525920385 675.4227530056102 0.8141353240194996 0.6754974992552982 0.739297794913653 0.7105883169762958 1.1148840444098211 0.7347540477657317 1.0653720392907626 0.6581509659329631 0.5516367081844122 0.9049688508005614 1.0 9.399646970090581 SEVDMLK ddPTM_A549_MK2206_60min_R1 2 SEVDMLK 7 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ; 119.21 0.018791 22642000.0 2895.3 3466.8 3410.5 3097.5 4066.2 3413.8999999999996 3194.6 3410.8999999999996 4376.7 4294.0 4525.0 False True 3383.9558567111817 3643.2453120999608 3894.160183304157 3856.387639052059 3468.067366462569 3775.156632036587 3775.017468427812 3894.4055204431547 3385.384438153726 3323.9824176874813 3401.317616353264 0.9948955782433818 1.0711276402366918 1.1448975434053394 1.1337922752379415 1.0196246742110697 1.1099100577628902 1.1098691431455354 1.144969673434543 0.9953155864883266 0.9772631646353869 1.0 11.731878016418676 -8.781837697846479 24.957198280740435 0.99778789781135 1.092549367277121 0.48061222175914353 0.046256208395053754 145.6161697979691 178159.56532955472 0.00787657791043061 0.008390194463967372 1.6525792757112379e-09 8.781837697846479 0.09476146946577091 SEVDMLK ddPTM_A549_PD325901_60min_R1 2 SEVDMLK 7 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ; 119.21 0.018791 39551000.0 8264.099999999999 8506.8 8206.7 9215.8 9252.400000000001 9130.8 8965.400000000001 9522.4 8718.400000000001 10057.3 9988.3 False True 9103.06534829112 9223.697890617192 8763.656012896108 9785.039035399626 8602.543343047188 9056.441792107089 9306.58320305513 9332.46826182171 8351.995967052686 9422.280361610443 8759.802421050486 1.0391861494975898 1.052957298266446 1.000439917667134 1.1170387829622066 0.9820476455467314 1.0338637056863011 1.0624193053362354 1.0653742873692063 0.9534457018096881 1.0756270414236708 1.0 13.096682614604374 -8.75994459661475 24.999991505324807 0.9780160248704075 1.0436249327236817 0.0 0.04541681164243807 27.30112786742671 456605.9171892383 0.005893154815385233 0.006507493315783797 1.7380225358959052e-09 8.75994459661475 0.06560890785327422 SEVIEDS(ph)DVETVSEK ddPTM_A549_MK2206_60min_R1 2 SEVIEDSDVETVSEK 15 0 Q56NI9;E5RFE4 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 SEVIEDS(0.999)DVETVSEK;SEVIEDS(0.995)DVET(0.004)VSEK 105.14 5.2946e-06 2067950.0 1538.05 1255.39 833.9100000000001 1263.3200000000002 1885.62 1006.3799999999999 1296.8000000000002 1260.51 1921.8000000000002 1560.0500000000002 1545.49 True False 1797.6352382877883 1319.283988795769 952.170977410693 1572.8334567125899 1608.2477958657091 1112.874463619022 1532.4117739489093 1439.191152649976 1486.5153684839797 1207.6336214982205 1161.7021796459228 1.5474148794622151 1.135647338802339 0.8196343211656079 1.353904197022318 1.384389066357687 0.9579688177551814 1.319108977152798 1.2388641235816822 1.2796010841066487 1.0395380525723876 1.0 10.182024543577763 -10.846786706409839 1.060157981009779 0.9983139360563293 1.2192855127882984 0.1458057299821267 0.19148278344427994 0.8074673739549726 1.591098973452507 0.13399632976488338 0.03177306798409269 1.4230275022473923e-11 10.846786706409839 0.2209715767319691 SEVIEDS(ph)DVETVSEK ddPTM_A549_PD325901_60min_R1 2 SEVIEDSDVETVSEK 15 0 Q56NI9;E5RFE4 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 SEVIEDS(0.995)DVET(0.005)VSEK;SEVIEDS(0.999)DVET(0.001)VSEK 159.02 1.4101e-19 2078000.0 1434.1 1161.4099999999999 1588.38 1491.23 1184.25 1757.1799999999998 1569.1999999999998 1344.73 1413.9499999999998 1540.85 1585.59 True False 1579.688776271379 1259.28609666875 1696.17701850487 1583.339890270945 1101.0723654407104 1742.8701086711724 1628.9167646991878 1317.9083052297221 1354.526598643575 1443.5604680368942 1390.5724818831472 1.1359988758961532 0.905588247340688 1.219768865415678 1.1386244952343278 0.791812278601696 1.2533471871318316 1.1714001146443433 0.9477451354746921 0.9740783859099829 1.0381051594534572 1.0 10.44146323001411 -8.281835618909362 24.793050317289886 0.9844161582472089 1.0830292865899849 0.11716606737736912 0.12872860229474015 1166.7366790736262 1418245.9223585846 0.020031853223688133 0.024232123065244797 5.2259395413837655e-09 8.281835618909362 0.09861312834277602 SEVIEDS(ph)DVETVSEKK ddPTM_A549_PD325901_60min_R1 2 SEVIEDSDVETVSEKK 16 1 Q56NI9;E5RFE4 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 SEVIEDS(1)DVETVSEKK;SEVIEDS(1)DVETVSEKK 190.71 7.011199999999999e-35 43598000.0 10953.3 9644.400000000001 11826.3 11268.400000000001 12321.3 10984.1 11556.5 13066.5 13317.3 12759.0 11951.1 True False 12065.270952606714 10457.167435024745 12628.903835319088 11964.423475606794 11455.894394177432 10894.649131366745 11996.288931459441 12805.87840702905 12757.620193158238 11953.394562535443 10481.19046426484 1.151135550273867 0.997707986576334 1.2049112053040905 1.141513792388276 1.0929955364551196 1.0394476818746472 1.1445540439666908 1.2217961738878929 1.2171919055048932 1.1404615347168834 1.0 13.355514968500305 -11.03015975015391 1.357237799792651 1.000867058001081 1.1413704919397532 0.0 0.07836351192440909 0.3978925215889215 1.3191156040845127 0.05016553639829459 0.011587961011586547 9.329110772293174e-12 11.03015975015391 0.14050343393867215 SEVLSES(ph)SELLQQELEELRK ddPTM_A549_MK2206_60min_R1 1 SEVLSESSELLQQELEELRK 20 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 SEVLS(0.122)ES(0.8)S(0.078)ELLQQELEELRK 98.12100000000001 3.5064e-07 2323700.0 1298.2 1747.1 1478.1 1458.8 2668.9 1932.7 1757.4 2217.7 2588.3 2193.8 2158.3 True False 1517.3044220572858 1836.0199275325492 1687.716806023127 1816.20606548802 2276.308345470451 2137.21703117757 2076.696831845939 2532.065766421409 2002.0541826657745 1698.2190563397291 1622.3345439503303 0.935259886880483 1.13171474673892 1.040301343712742 1.1195015678243645 1.4031066243141914 1.3173713394362656 1.2800669501798634 1.5607543930217462 1.2340575438841608 1.0467748854096532 1.0 10.66385563512432 -6.524801783187168 24.96009284067832 1.1958839708595361 1.0511121056658352 0.22517906802640864 0.15954887361931996 108.4938949355563 1408199.7059690447 0.027353560396261557 0.05724638554792167 2.9867454916099613e-07 6.524801783187168 -0.1447718651937009 SEVLSES(ph)SELLQQELEELRK ddPTM_A549_PD325901_60min_R1 2 SEVLSESSELLQQELEELRK 20 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 SEVLS(0.001)ES(0.977)S(0.022)ELLQQELEELRK;SEVLS(0.001)ES(0.856)S(0.143)ELLQQELEELRK 159.73 2.9603000000000006e-27 11321000.0 7295.3 7510.9 7026.9 6806.6 7849.8 6201.5 8092.9 7925.3 6305.9 6891.0 7611.1 True False 8035.913485483987 8143.8699025058395 7503.787690182365 7227.028223089811 7298.457128339869 6150.997040100773 8400.879738104804 7767.223674222426 6040.884952357952 6455.901083974586 6674.982950738102 1.203885245069487 1.2200585323750246 1.1241658211805043 1.0827036228295783 1.0934046097500256 0.9215000376024349 1.2585619768775376 1.1636319870095768 0.9050038025475357 0.9671786627201362 1.0 12.704548436530892 -6.352417550335396 0.2921058849174575 0.9512972097865076 1.3092047669601514 0.3094907538884677 0.0972064088010846 3.484739056470062 0.3501898509487552 0.05355741134007745 0.4168071702366216 4.442039843186525e-07 6.352417550335396 0.35790755717364386 SEVQAIIEST(ph)PELDMDKDLSGYKGSSTPTK ddPTM_A549_PD325901_60min_R1 1 SEVQAIIESTPELDMDKDLSGYKGSSTPTK 30 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SEVQAIIES(0.037)T(0.156)PELDMDKDLS(0.156)GY(0.145)KGS(0.156)S(0.156)T(0.156)PT(0.037)K 43.291000000000004 0.023737 4209200.0 1112.4 1395.9 975.74 997.45 1541.1 1583.5 1348.9 1324.3 1557.0 1346.7 1469.8 True False 1225.3300290944023 1513.5373919114757 1041.9595840012728 1059.060221126691 1432.8584525063773 1570.6045010077517 1400.233127646403 1297.885797606748 1491.5647046133513 1261.6691321707399 1289.0239178298618 0.950587504347715 1.1741732414551267 0.808332234638024 0.8215985805055297 1.1115840696879142 1.218444808729341 1.0862739692245336 1.006874876140239 1.1571272526304068 0.9787786826289654 1.0 10.33206331780649 -6.791953735316043 24.998886734901497 1.084796507544199 0.9461841792978062 0.2718906825257845 0.11071607999000965 213.9279635024731 175259.9262460496 0.01647579376159354 0.031138856286361673 1.6145305409751747e-07 6.791953735316043 -0.1386123282463928 SEVQQPVHPKPLS(ph)PDSR ddPTM_A549_MK2206_60min_R1 4 SEVQQPVHPKPLSPDSR 17 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SEVQQPVHPKPLS(0.959)PDS(0.041)R;SEVQQPVHPKPLS(0.975)PDS(0.025)R;SEVQQPVHPKPLS(0.991)PDS(0.009)R;SEVQQPVHPKPLS(0.997)PDS(0.003)R 150.63 4.0954e-17 528250000.0 14730.5 15571.0 16589.6 14235.8 18639.2 15571.1 13678.300000000001 14569.8 21141.4 22175.899999999998 24190.7 True False 17216.648273852137 16363.49739088166 18942.254735945644 17723.571639069338 15897.398371198946 17218.823466740356 16163.470055216982 16635.113768141153 16352.906655878458 17166.348788168572 18183.481560644603 0.9468290336166958 0.8999100274777948 1.0417287070559298 0.9747072682400564 0.8742769264609074 0.9469486582815855 0.8889095304059025 0.9148475616542732 0.8993275903373671 0.9440628149739233 1.0 14.15034083592357 -4.050565469911062 15.772009829067372 0.9440250136904803 0.9432785677121801 0.0 0.04892930961033028 0.0 0.0 0.0071135745716193865 0.0 8.900912466036427e-05 4.050565469911062 -0.0007464459783002031 SEVQQPVHPKPLS(ph)PDSR ddPTM_A549_PD325901_60min_R1 6 SEVQQPVHPKPLSPDSR 17 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SEVQQPVHPKPLS(1)PDSR;SEVQQPVHPKPLS(0.999)PDS(0.001)R;SEVQQPVHPKPLS(0.865)PDS(0.135)R;SEVQQPVHPKPLS(0.998)PDS(0.002)R;SEVQQPVHPKPLS(0.974)PDS(0.026)R;SEVQQPVHPKPLS(0.998)PDS(0.002)R 122.3 2.7122e-10 687951000.0 19669.8 19409.0 20096.9 21767.5 23669.2 22007.399999999998 22726.5 23399.4 22125.2 22150.2 24732.0 True False 21666.66361585858 21044.66454589143 21460.796486477117 23112.029037420656 22006.757046307175 21828.179030930205 23591.36939391798 22932.680610525826 21195.354786455566 20751.632591823225 21690.12078906526 0.9989185319235979 0.9702419249090017 0.9894272464031758 1.0655555707680628 1.0145981786049594 1.0063650287247154 1.0876550491969232 1.0572869018823992 0.977189338527837 0.9567319976514305 1.0 14.404750466736687 -2.002521667247739 13.55743666786957 1.005157107223953 0.0010113560748978845 0.0 0.04036334363091984 0.0 0.0 0.0053803014318090205 0.0 0.009942104708775054 2.002521667247739 -1.004145751149055 SEVS(ph)SPIQR ddPTM_A549_MK2206_60min_R1 1 SEVSSPIQR 9 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3;H0YG48 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 SEVS(0.5)S(0.5)PIQR 107.15 0.00049736 16493000.0 569.52 691.93 738.87 743.91 788.71 701.46 715.97 542.45 1147.3 1151.8 1133.3 True False 665.6410525728436 727.1462815280158 843.6528763049233 926.167983395389 672.6918037978189 775.6880316085368 846.0524813342082 619.3439486834526 887.4383818616243 891.6075800401591 851.8703325111933 0.7813877619268979 0.8535879860782232 0.9903536302502213 1.0872170893252928 0.7896645511938637 0.9105705434322594 0.9931704967822569 0.7270401668499409 1.0417528912476404 1.0466470611927827 1.0 9.734490037033552 SEVSS(ph)PIQR ddPTM_A549_MK2206_60min_R1 1 SEVSSPIQR 9 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3;H0YG48 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 SEVS(0.033)S(0.967)PIQR 142.98 3.657e-05 16806000.0 1868.3 2076.2 1965.8 1790.1 2759.0 2559.9 2482.8 2037.9 3537.1 3330.1 3724.2 True False 2183.6233644504914 2181.8697118327973 2244.5799995130665 2228.674580360643 2353.1547548252006 2830.7869188759073 2933.8926221162487 2326.778565807003 2735.952497588033 2577.828097145104 2799.378357308909 0.7800386677811021 0.7794122241947553 0.8018137289847522 0.7961319607054141 0.8405990382405217 1.0112198343910868 1.0480514770202949 0.8311768788709846 0.9773428770157928 0.9208573362063194 1.0 11.450890775975704 -7.123591194332119 3.7364956086676653 0.982034448817124 0.7917025809683745 0.6934535025417935 0.054648315497851783 0.09043712272616149 2.2591067729685883 0.007694668280592257 0.01382102572354437 7.523307371394856e-08 7.123591194332119 -0.19033186784874945 SEVSS(ph)PIQR ddPTM_A549_PD325901_60min_R1 2 SEVSSPIQR 9 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3;H0YG48 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 SEVS(0.021)S(0.979)PIQR;SEVS(0.017)S(0.983)PIQR 166.66 1.1504e-06 43173000.0 6603.4 6365.0 5952.0 5639.3 7587.0 6858.799999999999 6672.2 6639.299999999999 6881.5 6781.9 7189.9 True False 7273.772306833853 6901.400887969445 6355.938512283573 5987.626753220457 7054.115293729085 6802.944206827893 6926.114222167934 6506.873953069908 6592.294486060866 6353.689676593702 6305.587880531312 1.15354387959477 1.094489684185946 1.0079850812812743 0.949574705271721 1.1187085847314686 1.0788754888076626 1.0984089593854547 1.031921856669395 1.0454686558908755 1.007628439564042 1.0 12.622415166363803 SEVTSQSGLSNSSDSLDSSTRPPS(ph)VTR ddPTM_A549_MK2206_60min_R1 1 SEVTSQSGLSNSSDSLDSSTRPPSVTR 27 1 Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 SEVTSQSGLS(0.013)NS(0.013)S(0.013)DS(0.061)LDS(0.147)S(0.147)T(0.147)RPPS(0.329)VT(0.129)R 51.25899999999999 0.00236 8167000.0 1076.8 1638.8 1527.7 1407.7 1485.6 1444.9 1418.5 1664.8 2604.0 2536.6 2517.8 True False 1258.5375147675898 1722.20792011925 1744.3508318527367 1752.5865631940546 1267.0702079624198 1597.7983589530054 1676.2230886385937 1900.7904982361745 2014.198157733521 1963.5802982547882 1892.5607722550803 0.6649918635204405 0.9099881733610877 0.9216881473107233 0.9260397810664545 0.669500407351592 0.8442520749540577 0.8856904957621469 1.0043484606157655 1.0642713234162111 1.037525625090012 1.0 10.886123912177363 -8.178026815403731 2.519276459261408 1.0306964074521383 0.8299325872818396 0.5578703378686627 0.08497136440995241 0.1670565792686467 2.078852374617911 0.01418281648525302 0.018596655313730736 6.637020890179023e-09 8.178026815403731 -0.2007638201702987 SEWELKT(ph)PEK ddPTM_A549_MK2206_60min_R1 1 SEWELKTPEK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 S(0.001)EWELKT(0.999)PEK 50.563 0.010661 4609300.0 2157.1 1568.8 1152.3 1185.3 2370.0 2093.0 1686.6 2122.6 2469.1 2676.2 3094.3 True False 2521.165743968396 1648.645219113424 1315.7134670052424 1475.6985532101392 2021.3761395200163 2314.4798707790414 1993.033388295983 2423.485050189875 1909.8527923424888 2071.6445612983794 2325.8999116645073 1.08395280954465 0.7088203627530935 0.5656793142331155 0.6344634804831606 0.8690727100434165 0.9950900548952284 0.8568869959970412 1.0419558632063113 0.8211242378764791 0.8906851713218509 1.0 11.18357330062538 -6.939755444352405 6.741789562134984 0.9245171122933782 0.7332699490513654 0.2874315823389866 0.13563594163102938 0.20935330489363335 18.510125391324248 0.02002195062183418 0.03799998613295388 1.1488003405691385e-07 6.939755444352405 -0.19124716324201274 SEWLDPSQKS(ph)PLHVGETR ddPTM_A549_MK2206_60min_R1 2 SEWLDPSQKSPLHVGETR 18 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 SEWLDPS(0.006)QKS(0.994)PLHVGETR;SEWLDPS(0.001)QKS(0.999)PLHVGETR 113.89 2.5931e-10 72542000.0 3466.2 3310.2 3031.6 2629.8 5014.3 3488.2 3538.2 3594.1000000000004 5156.2 5447.3 5498.7 True False 4051.2098195462677 3478.675040992643 3461.526465827557 3274.1011180562077 4276.703112403043 3857.319008720236 4181.045140797372 4103.574681469625 3988.328932759443 4216.751146685848 4133.221033600374 0.9801580381529542 0.8416377959739628 0.8374888344193594 0.7921427601959622 1.0347143493261681 0.9332476964969366 1.0115706628821008 0.9928273005750858 0.9649445070411059 1.0202094474034729 1.0 12.013050801907674 -6.76638297644895 24.999975525132477 0.9850716704405439 0.8595292062578801 0.6091971753367849 0.050157250830533906 59.69869890497999 301900.88680091576 0.0066683792902872165 0.01288725637001211 1.712446544708488e-07 6.76638297644895 -0.1255424641826638 SEWLDPSQKS(ph)PLHVGETR ddPTM_A549_PD325901_60min_R1 2 SEWLDPSQKSPLHVGETR 18 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 SEWLDPS(0.172)QKS(0.827)PLHVGETR;S(0.001)EWLDPS(0.013)QKS(0.986)PLHVGETR 81.92200000000001 9.0326e-05 91464000.0 2974.0 2418.8999999999996 2950.5 2876.1 2735.0 3189.1 2322.9 2620.0 4043.3999999999996 2968.9 3614.3 True False 3275.9182906569154 2622.7491921302894 3150.7386727978305 3053.7501649029787 2542.9030352377818 3163.1290269427336 2411.2992306396536 2567.74204464976 3873.4699593022633 2781.4431473243553 3169.76401293541 1.0334896469542538 0.8274272726383347 0.9939978685921288 0.9633998469416041 0.8022373352907387 0.9979067886550546 0.760718848721685 0.8100735683070179 1.2220057844985044 0.8774921842678617 1.0 11.630159721228376 -8.756364305522476 24.999985287373374 1.1048360660671757 0.8971147147188012 0.131381984477971 0.12021947923623526 88.69637824830329 436920.8352839569 0.0190725609617606 0.021306213509957244 1.7524098857852117e-09 8.756364305522476 -0.20772135134837444 SEYQWIT(ph)SPSVKEPSK ddPTM_A549_MK2206_60min_R1 2 SEYQWITSPSVKEPSK 16 1 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 SEYQWIT(0.499)S(0.499)PS(0.002)VKEPSK;SEYQWIT(0.499)S(0.499)PS(0.003)VKEPSK 85.80799999999999 2.2219000000000002e-05 5498200.0 4064.0 3657.4 3302.7 3441.8 6207.1 4353.5 3298.8999999999996 3937.4 6689.9 5541.6 5920.1 True False 4749.90384473949 3843.54603798154 3771.072522327706 4285.041154508273 5294.04381249565 4814.184480380584 3898.2674283467436 4495.538507781782 5174.64833157507 4289.748711191648 4449.975783552031 1.067399931095367 0.8637229110747136 0.8474366391534797 0.9629358367177214 1.1896792409665367 1.0818450963654092 0.876019919648887 1.010238870152543 1.162848649806493 0.9639937203809932 1.0 12.119581769719897 -6.537135691602515 24.724375005398105 1.0652841615048518 0.9174811377894255 0.1852212978302853 0.0995041185089003 190.9089328131006 331073.32508144353 0.014764045540136925 0.03074487197512563 2.903115459113046e-07 6.537135691602515 -0.1478030237154263 SEYQWIT(ph)SPSVKEPSK ddPTM_A549_PD325901_60min_R1 1 SEYQWITSPSVKEPSK 16 1 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 S(0.002)EY(0.002)QWIT(0.479)S(0.479)PS(0.036)VKEPS(0.002)K 48.824 0.009447399999999998 6269600.0 2621.4 2406.6 2524.9 2890.9 2205.8 3027.4 2395.5 2484.6 2706.8 2890.9 3143.7 True False 2887.5225982273137 2609.412627963433 2696.254897457124 3069.4643272897392 2050.872217596891 3002.7458581312717 2486.6620633678976 2435.042703869006 2593.042609150556 2708.3680806359203 2757.044829556221 1.0473252256446242 0.9464527380874865 0.9779510541695176 1.113316800069517 0.7438661118640582 1.0891175311845036 0.9019302249677802 0.8832075118129127 0.9405152144616876 0.9823445928776806 1.0 11.428907010426089 -5.2540322529055015 22.615926103440188 0.9625967029205899 1.0473253859455343 0.06628778325540241 0.09502304421222024 501.71501625861185 1531710.944039545 0.011538725351707321 0.1551600530156794 5.571443710356661e-06 5.2540322529055015 0.0847286830249444 SEYQWITS(ph)PSVK ddPTM_A549_PD325901_60min_R1 1 SEYQWITSPSVK 12 0 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 SEYQWIT(0.114)S(0.885)PS(0.001)VK 94.191 9.3568e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SEYQWITSPS(ph)VKEPSK ddPTM_A549_PD325901_60min_R1 1 SEYQWITSPSVKEPSK 16 1 A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2 A0A2R8Y589 CEP78 Centrosomal protein of 78 kDa 1 SEYQWIT(0.061)S(0.332)PS(0.606)VKEPSK 77.562 0.00011473 4024700.0 3157.5 2711.1 2240.1 2693.1 2857.5 3328.7 2417.8 2490.8 3165.5 3144.0 2965.5 True False 3478.047075571355 2939.573911606278 2392.1266568155975 2859.4466705261316 2656.7990578398403 3301.592170826969 2509.8107020709267 2441.119040005202 3032.4650433227753 2945.4873034416028 2600.762299853349 1.3373183223116831 1.1302739630500005 0.9197790420718126 1.0994648264039237 1.0215462820226406 1.2694709435818639 0.9650288695020107 0.9386167433074722 1.1659908494881555 1.1325476778895527 1.0 11.344718832926638 -2.00000001091849 0.009435613809910788 7.349443765253307e-09 2.331020290195628 0.05169796797989323 0.1255897973654095 28546.648940237083 20.257739496746524 2166.3501409072665 2887.1612771641903 0.009999999748592477 2.00000001091849 2.3310202828461843 SFAPST(ph)PLTGR ddPTM_A549_MK2206_60min_R1 2 SFAPSTPLTGR 11 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 SFAPS(0.003)T(0.997)PLTGR;SFAPS(0.004)T(0.996)PLTGR 215.04 4.4122e-31 280720000.0 11874.699999999999 12995.0 13002.0 11236.0 15789.7 11993.2 11625.9 12132.6 17895.1 17060.4 16643.0 True False 13878.85905145867 13656.38999386726 14845.879109608755 13988.820504403198 13467.056046489111 13262.312463558159 13738.175541912879 13852.433204529189 13841.888422602584 13206.443791037611 12510.083776567364 1.1094137576804368 1.091630578801322 1.1867130048654486 1.118203583145115 1.0764960720498333 1.0601297881313787 1.09816814877338 1.1073013939743697 1.1064584913915463 1.0556638969736236 1.0 13.61080383041478 -14.999999952841883 0.21903917022385722 0.43080369816315756 1.1212448352514313 0.3928587888309206 0.03443377344816561 21.72095036835816 0.26662293948664734 5.30329037135021 0.021712299718783225 1.000000108585584e-15 14.999999952841883 0.6904411370882737 SFAPST(ph)PLTGR ddPTM_A549_PD325901_60min_R1 2 SFAPSTPLTGR 11 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 SFAPST(1)PLTGR;SFAPS(0.001)T(0.999)PLTGR 201.09 4.705599999999999e-24 378890000.0 9396.0 9708.0 10448.4 9855.900000000001 11698.9 9324.3 10015.400000000001 10733.9 10267.7 10668.8 11537.3 True False 10349.875003030387 10526.12723022896 11157.49125533329 10464.67655862705 10877.209623013992 9248.365992261814 10396.541527637168 10519.803943918343 9836.184275888574 9995.1701472512 10118.285240970506 1.0228882420829706 1.0403074216179475 1.1027057440676684 1.0342341918029698 1.075005236951661 0.9140250321085776 1.0275003402295835 1.0396824850639736 0.9721196864524374 0.9878324151981015 1.0 13.3046771948819 -7.21702545928123 24.999261378755648 0.9897699773846159 1.0557038921271635 0.44268360528701645 0.036217358621848626 318.65965602085925 179363.95959350766 0.005153620097166961 0.008926295516410618 6.06700762435963e-08 7.21702545928123 0.06593391474254762 SFAPST(ph)PLTGRR ddPTM_A549_MK2206_60min_R1 1 SFAPSTPLTGRR 12 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 S(0.002)FAPS(0.038)T(0.96)PLTGRR 72.321 0.0012327 18351000.0 3908.4 4357.3 3712.0 3437.7 5492.4 4315.8 3807.6 3805.4 6292.0 5457.7 6386.2 True False 4568.0423687942475 4579.067958466932 4238.417416925682 4279.936654324216 4684.475235738287 4772.49509140382 4499.391633627289 4344.827103548736 4866.872046259342 4224.801779462733 4800.330289846454 0.951610012847754 0.9539068526497998 0.8829428728874517 0.8915921188542041 0.9758651911196149 0.9942013993283939 0.937308760429318 0.9051100322698236 1.0138619120758492 0.8801064769228347 1.0 12.228917959481288 -8.774358186484125 24.99863911416562 1.0065459098708363 0.9371142970147236 0.0 0.04987904922727005 146.54979169767046 283581.38867172634 0.005948728749416633 0.0063519490337104745 1.6812868396001823e-09 8.774358186484125 -0.06943161285611266 SFDLLVK ddPTM_A549_MK2206_60min_R1 2 SFDLLVK 7 0 Q9HB71;Q9HB71-3 Q9HB71 CACYBP Calcyclin-binding protein 0 ; 81.635 0.042452 2918000.0 1517.68 1640.84 1691.27 1471.42 2888.3 2216.06 1730.35 2188.0 3160.0 2529.3999999999996 2612.6000000000004 False True 1773.827280286475 1724.3517474057062 1931.1175174363932 1831.9179660545533 2463.4348961078736 2450.5619982984263 2044.7321969868103 2498.1557004689753 2444.265045483077 1958.0067832554073 1963.8193159081843 0.9032538105299946 0.8780602845879768 0.9833478578162025 0.9328342741182214 1.2544101568573471 1.247855125187596 1.0412017951056802 1.2720904006964016 1.2446486424097047 0.9970401896927625 1.0 10.93944648313617 -6.738499588299622 23.38686065232751 1.1425287248235216 0.9252780453725405 0.5450777459308591 0.09941561056617024 81.09360585770764 82672.83042228258 0.01630010129039735 0.03390678006435464 1.8259984800753342e-07 6.738499588299622 -0.2172506794509811 SFDLLVK ddPTM_A549_PD325901_60min_R1 2 SFDLLVK 7 0 Q9HB71;Q9HB71-3 Q9HB71 CACYBP Calcyclin-binding protein 0 ; 91.065 0.034486 5082000.0 4086.6000000000004 4142.0 4736.3 4564.1 5491.4 5375.5 5279.200000000001 5111.2 5823.5 4917.2 5429.8 False True 4501.468623604087 4491.060876350265 5057.733799685599 4846.0140911768285 5105.703008301553 5331.723710241343 5480.102844889087 5009.253106341166 5578.75854676676 4606.7271528254 4761.969022338129 0.9452956544840906 0.9431100570547499 1.0621097650908802 1.0176492262852717 1.0721831629628389 1.119646869862136 1.150806067654416 1.0519289568754104 1.1715234854735757 0.9673996473340127 1.0 12.217342520250485 -5.828245394743641 1.0435442918720743 1.0875897160038326 0.9142196083141614 0.3591783817634303 0.06056661450819391 0.6926265369905774 1.0126790087519377 0.010073074319630835 0.10633910325621901 1.485096262990553e-06 5.828245394743641 -0.1733701076896712 SFEDRVGT(ph)IK ddPTM_A549_MK2206_60min_R1 2 SFEDRVGTIK 10 1 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;O43399-6 O43399-2 TPD52L2 Tumor protein D54 1 SFEDRVGT(1)IK;SFEDRVGT(1)IK 72.49600000000001 0.00068169 2809100.0 686.03 1291.1 949.15 1052.4 1399.7 862.42 680.22 759.33 1295.7 1269.5 1663.5 True False 801.8150921768291 1356.8114752660256 1083.7537422615867 1310.238047244031 1193.8059841713784 953.6807119719354 803.8071690897034 866.9673528505969 1002.2260188077282 982.7190682939586 1250.407039735613 0.6412432645503704 1.0850958385142417 0.866720761977425 1.047849224778092 0.9547338956311361 0.7626962114461403 0.642836407302746 0.6933481060966429 0.8015198147154063 0.7859193343167242 1.0 10.28818209044361 -5.215709051696147 22.616580318119357 0.8836778441892501 0.64124006453826 0.16331307531677164 0.13868277769911413 14135.390914249525 6990294.452758725 0.020455822840885676 13.492586708072906 6.0854254762192425e-06 5.215709051696147 -0.24243777965099012 SFEDRVGT(ph)IK ddPTM_A549_PD325901_60min_R1 2 SFEDRVGTIK 10 1 O43399-2;O43399;O43399-4;O43399-3;O43399-5;O43399-7;A0A087WZ51;O43399-6 O43399-2 TPD52L2 Tumor protein D54 1 SFEDRVGT(1)IK;SFEDRVGT(1)IK 101.39 0.00016881 18029400.0 3291.8 3970.8 4237.6 5087.700000000001 4740.3 5418.4 5129.9 6204.9 4081.2 5026.9 5306.0 True False 3625.9811127049215 4305.433251523813 4525.189018758887 5401.955673994952 4407.357681147221 5374.274346864796 5325.121151688992 6081.138401850118 3909.6813567553036 4709.500676103876 4653.395637505269 0.7792118691736354 0.9252239841424696 0.9724488032538933 1.1608631835334322 0.9471272215981292 1.1549145539118606 1.1443516877803754 1.306817402938529 0.8401781540439406 1.0120567952886732 1.0 12.18406813670497 -4.217139073446382 15.548579123592562 0.9839386724845012 0.9927442719277548 0.0 0.15346936474330838 0.0 0.0 0.02161015371585848 0.0 6.06542066463427e-05 4.217139073446382 0.008805599443253653 SFEQPSSEASVEDS(ph)NQADVKSDEETDDGVDDLKINPEKK ddPTM_A549_PD325901_60min_R1 1 SFEQPSSEASVEDSNQADVKSDEETDDGVDDLKINPEKK 39 3 Q9Y485;F5H269;E7EMZ0 Q9Y485 DMXL1 DmX-like protein 1 1 SFEQPSS(0.001)EAS(0.007)VEDS(0.33)NQADVKS(0.33)DEET(0.33)DDGVDDLKINPEKK 75.14 1.8608e-06 14968000.0 1319.2 1039.1 1582.9 1202.9 1252.5 1796.4 1442.9 1577.5 1579.3 1078.9 1514.6 True False 1453.1242128562878 1126.668603721767 1690.3251127509527 1277.200401015887 1164.5287208904288 1781.7707139945219 1497.8103490851763 1546.0355249751901 1512.9275131636903 1010.7780698737746 1328.3138018404602 1.0939615404454093 0.8481946074494586 1.2725344797358151 0.9615200860265456 0.8766969968067054 1.341377851774008 1.1276027901011556 1.1639083496934708 1.1389835075623218 0.7609482552039131 1.0 10.37538029496089 -5.7402455986325185 24.994100160733748 1.0867288900004728 0.9710782762609 0.04398947257478525 0.16878552156930504 439.9189308140133 518793.93476764223 0.01824145208415358 0.07050996424542433 1.8186720873113241e-06 5.7402455986325185 -0.11565061373957275 SFEQPSSEASVEDSNQADVKS(ph)DEETDDGVDDLKINPEKK ddPTM_A549_PD325901_60min_R1 1 SFEQPSSEASVEDSNQADVKSDEETDDGVDDLKINPEKK 39 3 Q9Y485;F5H269;E7EMZ0 Q9Y485 DMXL1 DmX-like protein 1 1 SFEQPSSEASVEDS(0.007)NQADVKS(0.989)DEET(0.004)DDGVDDLKINPEKK 195.0 3.479499999999999e-98 13735000.0 1008.8 1040.9 1123.2 1156.4 1247.1 1254.7 1299.9 1438.3 1283.6 1313.0 1329.2 True False 1111.2126333606914 1128.6202960388682 1199.427106350288 1227.8282016250482 1159.5079982614395 1244.482139194459 1349.368405832573 1409.6119781754771 1229.65475583924 1230.0969559220177 1165.7168264930267 0.9532440538785846 0.9681770652948704 1.0289180692009707 1.0532817007702282 0.9946738109200448 1.0675681356838538 1.157543903601399 1.2092233260595466 1.0548485943525117 1.0552279318320161 1.0 10.187001659280943 -5.7468133742586245 1.514180621445844 1.051878540913806 0.9427246403582992 0.28803093349052067 0.061976554903350696 0.702063952040402 2.5722378878925203 0.010521254794712264 0.08714122638006974 1.791375481488444e-06 5.7468133742586245 -0.10915390055550689 SFETFSHR ddPTM_A549_MK2206_60min_R1 2 SFETFSHR 8 0 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 110.31 0.0017246 6451600.0 484.95 549.76 584.559 707.51 439.91999999999996 427.16999999999996 601.41 600.63 699.64 979.9000000000001 901.51 False True 566.797704110831 577.7404357851839 667.4582561478068 880.8499817613312 375.2083507585001 472.37284586750263 710.678412222867 685.7711418522305 541.1726570955 758.5399094298936 677.6401865897525 0.8364287055690424 0.8525769976728836 0.9849744294340236 1.2998786069554684 0.5536984939555445 0.6970850537137344 1.0487548204591888 1.011998927193792 0.798613582554733 1.1193844822681955 1.0 9.404375624177106 -5.553174431264234 23.048498646765353 0.9131158772328998 0.8404654536375628 0.016839295509146313 0.19586583358722545 295.2388497722056 224612.9016797661 0.0255004954942515 0.09876778122772835 2.7978573545908068e-06 5.553174431264234 -0.07265042359533702 SFETFSHR ddPTM_A549_PD325901_60min_R1 2 SFETFSHR 8 0 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 132.08 0.0011549000000000002 14267400.0 599.66 508.29999999999995 503.47 732.26 664.56 645.25 529.49 640.65 885.74 670.41 950.8599999999999 False True 660.5370417536399 551.1362248790051 537.6385018110573 777.4900371168782 617.8835982075395 639.9952979319555 549.6400316980455 627.8717331697973 848.5154280438209 628.0801981871139 833.9102479981641 0.7920960838882677 0.6609059262696799 0.6447198641600588 0.932342586007637 0.7409473617703999 0.7674630446961056 0.6591117365657504 0.7529248317514136 1.0175140910915978 0.7531748167082084 1.0 9.703748307574406 -8.753349249130887 8.73473520001851 1.0083571424833313 0.7417093760206152 0.2769259611493793 0.10773968202536731 0.04991749251268273 31.834242108588775 0.012666111366278906 0.014042148406977316 1.7646181866280045e-09 8.753349249130887 -0.26664776646271615 SFEVEEVET(ph)PNS(ph)TPPR ddPTM_A549_MK2206_60min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 SFEVEEVET(0.981)PNS(0.65)T(0.37)PPR 103.85 1.5538999999999999e-06 2229600.0 942.37 1045.2 1026.6 820.29 1428.0 1036.9 997.07 1240.7 1559.9 1526.8 1892.5 True False 1101.4190172655403 1098.3962155898469 1172.187316868509 1021.2610868242177 1217.9430916601607 1146.6240697614858 1178.2247127168714 1416.5730244843942 1206.5851406484342 1181.8948195913472 1422.540019657138 0.7742622365949363 0.7721373039857139 0.8240100810316963 0.7179137828898221 0.8561749229056562 0.8060399383616964 0.8282541766388044 0.9958053938094606 0.8481906476973818 0.8308341440377957 1.0 10.47425352443384 -14.999999999994964 0.07521444298162003 1.6285262212150453 0.6128805336856891 0.26330505832285267 0.0711789899996623 75.60678319777938 0.4229348360736551 8.071133602841673 0.9442754228343905 1.0000000000115957e-15 14.999999999994964 -1.0156456875293562 SFEVEEVET(ph)PNS(ph)TPPR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 SFEVEEVET(0.988)PNS(0.56)T(0.452)PPR 110.77 6.7518e-07 4959800.0 1691.6 1883.4 2128.5 2078.4 2367.9 2569.4 2033.4 2157.8 1787.6 2409.0 2710.2 True False 1863.3299867098988 2042.120727792876 2272.9528097102816 2206.778047611122 2201.586872811532 2548.4756582818563 2110.7821497191753 2114.760986238648 1712.4733885464514 2256.895328877487 2376.8625813733097 0.7839451894746474 0.8591665095812878 0.9562828021790848 0.9284415787874805 0.9262575338030243 1.0722015139846206 0.888053927164608 0.8897279139363522 0.7204763968967083 0.9495270557768183 1.0 11.214842780747585 -5.362409053490822 3.6870489588262902 0.8945500518647447 0.7817677635363877 0.12385704445361012 0.08647545840427015 0.5201805428304659 11.341984292315587 0.015700018783450956 0.12917775677334106 4.341011601522672e-06 5.362409053490822 -0.11278228832835702 SFEVEEVET(ph)PNS(ph)TPPRR ddPTM_A549_MK2206_60min_R1 2 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 S(0.001)FEVEEVET(0.89)PNS(0.577)T(0.531)PPRR;SFEVEEVET(0.98)PNS(0.537)T(0.482)PPRR 57.496 0.0032210999999999997 9581400.0 1595.8000000000002 1336.5900000000001 989.96 1117.96 1554.31 1320.4699999999998 881.01 849.74 1937.98 1965.39 1707.94 True False 1865.1320264358474 1404.6167219625265 1130.351213916957 1391.8602501871314 1325.673057982006 1460.2012589429544 1041.078113021845 970.1932472196092 1499.0306243181299 1521.4070339773646 1283.8113612540087 1.452808475393155 1.0940989964370753 0.8804651898491115 1.084162589765199 1.032607358052282 1.137395495173567 0.8109276365999243 0.7557132430047497 1.1676408774369298 1.1850705484420045 1.0 10.326217518137387 -5.281293496933617 4.03365938860894 1.0312658557435368 1.4824185250614983 0.4605655698688398 0.1365383481869754 0.15347029632664658 5.1816818285521595 0.01907792022958722 0.1940358359619188 5.232467060786328e-06 5.281293496933617 0.4511526693179615 SFEVEEVET(ph)PNS(ph)TPPRR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 SFEVEEVET(1)PNS(0.542)T(0.459)PPRR 84.499 4.3101999999999995e-05 8821000.0 1702.3 1898.1 1391.3 1673.1 1735.6 1106.5 1628.4 1809.0 1948.2 2185.4 2141.0 True False 1875.1162428329735 2058.0595483825286 1485.7219845665545 1776.443587114208 1613.6974434949525 1097.4890308589052 1690.3696530946702 1772.9180758669527 1866.323929047995 2047.4134710373025 1877.6705729172224 0.9986396282068369 1.0960706196641548 0.7912580651771512 0.9460890598899123 0.8594145675872467 0.5844949836721376 0.9002482530620085 0.94421146149853 0.9939570635909798 1.090400787320409 1.0 10.874728256861784 -8.47152806586371 2.8637050321129247 0.9968880993523692 0.8777869789057017 0.19791897068433573 0.12430300838067346 0.3818153909770213 6.223966227465292 0.021474329560423187 0.025623487555071264 3.3765402736978205e-09 8.47152806586371 -0.11910112044666754 SFEVEEVET(ph)PNST(ph)PPR ddPTM_A549_MK2206_60min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 SFEVEEVET(0.992)PNS(0.168)T(0.84)PPR 119.32 4.4216000000000004e-07 2666700.0 606.97 1135.8 741.6 789.12 1222.6 1041.0 823.44 593.02 1301.5 1021.5 1400.0 True False 709.41169700825 1193.607368605959 846.7700313556265 982.4544354249427 1042.757159568427 1151.1579290401255 973.0483892199954 677.082401047583 1006.7123280684252 790.7424405374392 1052.34136196565 0.6741269730984937 1.134239717021519 0.8046533776587091 0.933589109896653 0.990892496728133 1.0939016279754485 0.9246509016831338 0.6434056718847129 0.9566404633074621 0.751412487541519 1.0 10.039387051393074 SFEVEEVET(ph)PNST(ph)PPR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 SFEVEEVET(1)PNS(0.23)T(0.77)PPR 141.85 1.1945e-13 4421200.0 2487.1 2230.5 2101.2 1932.3 2457.0 2554.2 1719.5 2805.6 2702.2 2347.7 2936.5 True False 2739.588561093751 2418.4720629404314 2243.800067542045 2051.653782428297 2284.4287961898453 2533.39944204231 1784.936513446504 2749.6401070493775 2588.6359311536257 2199.4658213390107 2575.329116007204 1.0637819236638832 0.9390924243073195 0.8712673085531054 0.7966569281091286 0.8870434392213252 0.9837187124145508 0.6930906431927712 1.0676849378041535 1.0051670347932278 0.8540523258437226 1.0 11.330541098973702 SFEVEEVET(ph)PNST(ph)PPRR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 2 SFEVEEVET(1)PNS(0.178)T(0.822)PPRR 101.49 7.2757e-09 7590000.0 1904.9 2570.4 1769.1 2196.8 2064.7 2060.0 1800.8 2181.6 2001.7 2066.1 2199.4 True False 2098.2840456867375 2787.0166288195837 1889.1617644625123 2332.4913467052124 1919.6825948283163 2043.2240429908225 1869.330429435572 2138.086276567907 1917.5755100992583 1935.6460933971691 1928.8877431453232 1.0878207159247069 1.4448827510692563 0.9794047223204229 1.209241623829159 0.9952277428535076 1.0592757666960224 0.969123494137282 1.1084555252974215 0.9941353595686089 1.0035037550919503 1.0 10.913553468940712 -6.342117952461502 0.9330550214983873 1.005232507186084 1.2478195672602768 0.30169218642069884 0.11276068028626976 0.512146576406633 0.7361979633946331 0.015571512915953595 0.08543438946025536 4.5486450418355693e-07 6.342117952461502 0.24258706007419284 SFEVEEVET(ph)PNSTPPR ddPTM_A549_PD325901_60min_R1 2 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 S(0.022)FEVEEVET(0.978)PNSTPPR;S(0.012)FEVEEVET(0.987)PNSTPPR 338.78 4.478699999999998e-187 191917000.0 23292.0 22571.0 22368.0 20358.6 30419.0 24849.0 28161.0 26820.0 26052.0 26331.0 27275.0 True False 25656.586693335863 24473.137382931374 23886.026989710845 21616.10448426472 28282.474379853033 24646.637982659704 29232.682265290485 26285.054060117018 24957.125038270402 24668.456166323416 23920.34791047045 1.072584177678512 1.023109591655185 0.9985651997668236 0.9036701541787729 1.1823604943251342 1.030362855712117 1.2220843264781576 1.0988575148863735 1.0433428949980337 1.0312749738696527 1.0 14.545950752574607 -5.235679905985942 20.485371649222515 1.0405172400773772 1.07258461300957 0.0 0.08480887157135239 3265.2065748238974 2596175.4504868644 0.011544262087022986 0.7465776186977127 5.811926240634918e-06 5.235679905985942 0.03206737293219275 SFEVEEVET(ph)PNSTPPRR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 S(0.042)FEVEEVET(0.449)PNS(0.059)T(0.449)PPRR 94.71700000000001 1.0407e-05 11014000.0 5083.7 4169.0 4636.3 4545.1 6031.7 5432.9 5154.7 5810.8 5360.5 5800.6 5956.9 True False 5599.793481577861 4520.336261106771 4950.947198336753 4825.8405043289595 5608.054200235364 5388.656263672254 5350.864929260074 5694.899035515586 5135.216826640893 5434.349126063409 5224.239063900329 1.0718869127319663 0.8652621378570613 0.947687718302933 0.9237403658794413 1.073468141798336 1.0314719900373728 1.024238145270712 1.090091583838024 0.9829597696103567 1.0402183092299409 1.0 12.351005201533418 -6.734053150896638 24.999688788714284 1.0095555404409469 0.9456200779193356 0.26210300696945 0.057119777579150655 255.13611509985427 232901.43659490268 0.007811151590176118 0.016257049862069852 1.8447896317762209e-07 6.734053150896638 -0.06393546252161131 SFEVEEVETPNS(ph)TPPR ddPTM_A549_PD325901_60min_R1 1 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 SFEVEEVET(0.004)PNS(0.631)T(0.365)PPR 103.87 3.1261999999999995e-07 7046800.0 754.12 1078.1 775.12 938.68 1105.5 1029.2 927.03 736.48 1115.2 1202.6 1093.3 True False 830.677707246198 1168.9552705922792 827.7243043752093 996.6601317030446 1027.853493767959 1020.8185364301719 962.3086339402807 721.7903286426174 1068.3320222124657 1126.6676307629996 958.8310309997196 0.8663442049639306 1.219146265399311 0.8632639929395979 1.039453354637347 1.0719860544107271 1.0646490397435524 1.0036269194760365 0.7527815697517078 1.114202594276257 1.1750429370107955 1.0 9.90513278998515 SFEVEEVETPNS(ph)TPPRR ddPTM_A549_MK2206_60min_R1 2 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 SFEVEEVETPNS(0.685)T(0.315)PPRR;SFEVEEVETPNS(0.5)T(0.5)PPRR 236.96 3.029999999999999e-74 101409100.0 4322.860000000001 5347.1900000000005 5254.0 4202.1900000000005 6902.28 6304.3 5752.099999999999 5200.6 7808.0 7244.4 7131.7 True False 5052.4530842201175 5619.33913130489 5999.096203805909 5231.7267386434805 5886.963755395029 6971.416841544343 6797.1821136116 5937.800976169533 6039.50046681388 5607.88500854569 5360.702065093163 0.9424983934697202 1.0482468645097576 1.1190877856969004 0.9759405904518514 1.0981702926056423 1.3004671322697707 1.267964910393406 1.107653606574075 1.1266249072375785 1.0461101811760978 1.0 12.388206240475794 -4.479202162818136 1.0722187916613015 1.095562740190699 0.3791794650132444 0.20371620859229322 0.0950878093022645 12.076779996182683 3.2310381650828788 0.01621189043759396 14.787886278926601 3.317399976010871e-05 4.479202162818136 -0.7163832751774547 SFEVEEVETPNST(ph)PPRR ddPTM_A549_MK2206_60min_R1 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 SFEVEEVETPNS(0.099)T(0.901)PPRR 216.2 1.764e-55 94603000.0 5598.6 6742.2 6464.6 5773.0 8096.4 6995.3 7150.1 7013.4 9455.9 9408.2 9143.1 True False 6543.506807371681 7085.349181735418 7381.377487461684 7187.385259159814 6905.430285236226 7735.538002895672 8449.180617606493 8007.570927636703 7314.153747969439 7282.881085721328 6872.615933277242 0.9521129757430481 1.0309537518935286 1.0740273513206253 1.0458005116157383 1.0047746523707366 1.1255594780788138 1.229398048666668 1.1651416295306134 1.0642459609235937 1.0596956321184166 1.0 12.746643623243303 -5.306092221267091 2.5986495933274965 1.0610126073393729 0.9353107901287869 0.1927539663521597 0.06790509902909382 0.68127182139403 6.283758731501089 0.011053278259145299 0.1774238352494234 4.942057325835336e-06 5.306092221267091 -0.12570181721058593 SFEVEEVETPNST(ph)PPRR ddPTM_A549_PD325901_60min_R1 2 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 SFEVEEVETPNS(0.225)T(0.775)PPRR;SFEVEEVETPNS(0.093)T(0.907)PPRR 206.21 3.993499999999999e-49 272230000.0 12929.2 13491.4 12850.1 14202.8 14801.7 15475.599999999999 14724.0 16044.5 14316.7 15103.900000000001 15028.400000000001 True False 14241.762866026027 14628.367626072413 13722.18505992863 15080.074699100858 13762.079655092892 15349.57184451883 15284.329877281958 15724.479860833242 13715.018886665355 14150.237176352306 13180.002072876781 1.080558469359747 1.109891147602794 1.0411367907268854 1.1441633025334836 1.0441636942845383 1.1646107306846956 1.1596606580765028 1.1930559474791556 1.0405930750868082 1.0736141844372071 1.0 13.686062976794414 -8.943444732599161 8.57489553802818 1.017794700857853 1.1160530260442787 0.3277449317020118 0.04907854264674637 0.17731905653036267 24.397941499194808 0.008277493298969502 0.008762618032815379 1.1390827299211241e-09 8.943444732599161 0.09825832518642574 SFEYS(ph)DCEEAFVDQSHLQANR ddPTM_A549_PD325901_60min_R1 2 SFEYSDCEEAFVDQSHLQANR 21 0 K7EQI1;P58317 K7EQI1 ZNF121 Zinc finger protein 121 1 S(0.005)FEYS(0.995)DCEEAFVDQSHLQANR;S(0.011)FEYS(0.989)DCEEAFVDQSHLQANR 142.45 4.8035e-22 12863800.0 2831.2 3349.2 2962.2 3328.1 3656.2 3217.8999999999996 3472.9 2868.4 2689.6 3360.7 3577.2 True False 3118.6213397807173 3631.448838018423 3163.2327051556467 3533.6691783364977 3399.401125205256 3191.694489291346 3605.0631099437987 2811.1875117837326 2576.5654653359475 3148.5048284593504 3137.227077739136 0.9940693684271568 1.1575345832586181 1.0082893672571678 1.1263670403109807 1.08356871879834 1.0173616414121551 1.1491240578421285 0.8960739666347755 0.8212875260507974 1.0035948149243765 1.0 11.615274242301238 -8.274090749907622 24.421425038856583 0.9117849286813209 1.0770025262568177 0.49629263229751364 0.070046034930245 343.45152983476197 662976.3753334304 0.0127388128525684 0.015456492525772423 5.3199708186864605e-09 8.274090749907622 0.1652175975754968 SFFT(ph)PGKPK ddPTM_A549_MK2206_60min_R1 2 SFFTPGKPK 9 1 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 S(0.003)FFT(0.997)PGKPK;S(0.051)FFT(0.949)PGKPK 72.531 0.0010328 25667000.0 7808.200000000001 8172.3 8053.7 7422.1 11392.7 8679.3 7429.6 8273.4 11289.6 11398.8 11961.599999999999 True False 9126.033267838317 8588.235163284446 9195.835762579296 9240.514833190731 9716.848921818431 9597.737765146941 8779.462149699892 9446.179786224862 8732.523625786622 8823.803163189585 8991.204596634509 1.0149956181905009 0.9551818191857298 1.0227590378736775 1.0277282352855748 1.0807060185745898 1.0674584992470824 0.9764500468586963 1.0506022507552164 0.971229553496679 0.98138164562426 1.0 13.13429869841854 -8.772432113689812 24.99357517350439 0.9864139556703297 1.0239309425161565 0.20884401756062354 0.034832587506103664 271.1656942986884 616533.6177827519 0.006357503848442653 0.006799799126023469 1.688759815667911e-09 8.772432113689812 0.037516986845826716 SFFT(ph)PGKPK ddPTM_A549_PD325901_60min_R1 2 SFFTPGKPK 9 1 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 S(0.134)FFT(0.866)PGKPK;S(0.086)FFT(0.914)PGKPK 67.02199999999999 0.0020209 40090000.0 7910.700000000001 7557.1 8352.7 8151.5 9347.2 9944.400000000001 9308.0 9072.8 9784.400000000001 8591.7 9408.0 True False 8713.788440450451 8193.963338644757 8919.56445086543 8654.999641600298 8690.684918089426 9863.41610345531 9662.22103353304 8891.835886526094 9373.195694167549 8049.218595731309 8250.875642225696 1.056104687344419 0.9931022710741539 1.081044586979056 1.0489795285855974 1.0533045575930036 1.1954387062843463 1.1710540132352099 1.0776839055748388 1.1360243567601638 0.9755593157334281 1.0 13.010331521312638 -6.169650570267459 1.5268785147349684 1.0833413313094402 1.0281504067337432 0.09140218883068518 0.06496970397768514 0.9203167862174387 3.9323694570616827 0.010475294075257623 0.04487137244363213 6.766271650337699e-07 6.169650570267459 -0.055190924575696965 SFGEKS(ph)YLNVHR ddPTM_A549_PD325901_60min_R1 2 SFGEKSYLNVHR 12 1 Q6ZN11-3;Q6ZN11-2;Q6ZN11 Q6ZN11-3 ZNF793 Zinc finger protein 793 1 S(0.016)FGEKS(0.536)Y(0.448)LNVHR;S(0.01)FGEKS(0.535)Y(0.456)LNVHR 47.288000000000004 0.015073 25210800.0 3407.9 3163.2 3728.3 2810.6000000000004 4040.2999999999997 2987.3 3148.0 3324.6 3501.3 3236.3999999999996 3171.3 True False 3753.8674992366173 3429.7739652513656 3981.324858089191 2984.2043786642716 3756.5232662783205 2962.9724192361587 3267.798862651699 3258.2882449017534 3354.1525370987324 3032.0531516725187 2781.2502045270385 1.3497050690104941 1.233177065360292 1.43148748415687 1.0729722819640193 1.3506599514721225 1.065338319584959 1.1749388305060458 1.1715192828024752 1.2059873403835373 1.0901763339153192 1.0 11.441517821721117 -14.99999999962841 0.060893019444253904 0.16386184745764912 1.5851705070223328 0.42812713116060463 0.09868841290995563 154.9592576368553 0.712841508346901 19.554454184597265 3.3845207076830466 1.0000000008556193e-15 14.99999999962841 1.4213086595646836 SFGRS(ph)PSRK ddPTM_A549_MK2206_60min_R1 2 SFGRSPSRK 9 2 O60293-2;O60293;G3V1X1;O60293-4 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(0.006)FGRS(0.984)PS(0.01)RK;S(0.001)FGRS(0.966)PS(0.033)RK 64.12100000000001 0.0013183 18490000.0 2022.7399999999998 2170.1 2170.6 2194.2 2432.2 1930.21 1797.6 1951.17 2779.5 2716.6 2917.6 True False 2364.12906075501 2280.5488207534686 2478.423719067587 2731.77909850138 2074.4266019158576 2134.463541030298 2124.2006514887103 2227.754322707518 2149.9476879494337 2102.9181732393604 2193.079398336414 1.0779951982351152 1.0398842935114 1.1301112586017743 1.2456362047692402 0.9458967165025753 0.9732723505812968 0.9685926798181804 1.015811066574884 0.9803328094643091 0.9588882987248676 1.0 11.098742329009495 -6.789109775678198 24.99999965320524 0.9868150896152577 1.1179198740893728 0.6548048523804482 0.050605422526956816 105.39720167707564 95225.32512321296 0.0071887765637206535 0.01358751368159359 1.6251379212274313e-07 6.789109775678198 0.1311047844741151 SFGRS(ph)PSRK ddPTM_A549_PD325901_60min_R1 3 SFGRSPSRK 9 2 O60293-2;O60293;G3V1X1;O60293-4 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(0.006)FGRS(0.993)PS(0.001)RK;S(0.003)FGRS(0.97)PS(0.027)RK;S(0.013)FGRS(0.981)PS(0.006)RK 86.911 0.00023869 47621000.0 8850.2 8668.5 8589.400000000001 9769.0 9532.3 10039.1 9873.7 10360.7 9695.5 9634.0 10704.400000000001 True False 9748.665788827113 9399.024917103401 9172.32833625816 10372.408942991271 8862.784132649764 9957.344898052992 10249.449056595955 10154.047710688084 9288.031852009462 9025.707595851274 9387.8266607824 1.0384369184778535 1.0011928486459791 0.9770449186685046 1.104878617574178 0.9440719831006255 1.0606656106732084 1.091780816470864 1.0816185766516726 0.9893697644429429 0.961426741458289 1.0 13.196575488481166 -8.837578060340384 24.99997642300369 0.9949800233696633 1.0359594689905909 0.1923358765222215 0.047551548420905095 52.15353762001896 17122.55911061933 0.007900437263492687 0.008410656140909837 1.4535231050466981e-09 8.837578060340384 0.04097944562092759 SFGS(ph)PNR ddPTM_A549_MK2206_60min_R1 3 SFGSPNR 7 0 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 1 SFGS(1)PNR;S(0.003)FGS(0.997)PNR;S(0.001)FGS(0.999)PNR 90.919 0.012469 492791000.0 15391.6 17344.3 14825.2 12946.9 19444.5 15011.9 13108.1 15576.5 20982.1 20318.5 20274.2 True False 17989.325791508953 18227.05078650494 16927.636284861695 16118.891081208416 16584.239807973405 16600.449293907277 15489.672096005314 17784.516576030597 16229.687851528628 15728.536738188897 15239.55660054571 1.1804362989711117 1.1960355057739838 1.1107696062663357 1.057700791677313 1.0882363734506255 1.089300018959399 1.0164122554228807 1.1669969830614202 1.0649711324900006 1.0320862444006853 1.0 13.895533307347893 -2.0000000000000004 0.11721742025532937 0.9727358893965898 1.606024798177627 0.521328652198906 0.04391068121435709 47.06406472292772 0.3674550060844212 0.17247550550200438 4.882767425754123 0.00999999999999999 2.0000000000000004 0.6332889087810372 SFGS(ph)PNR ddPTM_A549_PD325901_60min_R1 1 SFGSPNR 7 0 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 1 S(0.031)FGS(0.969)PNR 62.582 0.027172 517840000.0 3813.4 3708.5 3336.2 3636.3 5085.9 3916.0 4600.7 4382.3 3600.9 4501.4 4175.1 True False 4200.533560723295 4021.0283099818826 3562.614594200346 3860.90599236351 4728.683929402495 3884.1093943456617 4775.78215609964 4294.891588652159 3449.566695467062 4217.180835786271 3661.589168139513 1.1471886571200516 1.0981647927544542 0.9729695032964453 1.0544345132868285 1.2914294073589863 1.060771489096144 1.3042921903022393 1.1729583498944074 0.9420955047285707 1.1517351188607157 1.0 11.838254213881061 -8.762736986278693 24.99771677174895 0.9726562038998818 1.1362896260914221 0.10121999871543652 0.10788787638079753 26.41669136218161 508902.6438501716 0.016449801919233207 0.01798646253200252 1.7268833957723332e-09 8.762736986278693 0.1636334221915403 SFGS(ph)PNRAYT(ph)HQVVTR ddPTM_A549_PD325901_60min_R1 1 SFGSPNRAYTHQVVTR 16 1 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 2 S(0.145)FGS(0.851)PNRAY(0.012)T(0.991)HQVVT(0.001)R 69.255 0.0080686 14036000.0 1491.7 1524.4 1975.5 1742.8 1775.6 1683.1 1826.8 1789.2 2190.4 1845.2 2169.9 True False 1643.1362858685002 1652.8665378822654 2109.569309646539 1850.4487978140228 1650.8879814874597 1669.393391630027 1896.3198736633176 1753.5130023997522 2098.3451053211834 1728.6937570961977 1903.0160561294151 0.8634379518639007 0.8685510206593138 1.108539942609437 0.9723768708382261 0.8675113255981853 0.8772355788870441 0.9964812790493649 0.9214388899935293 1.1026418293017728 0.908396832243352 1.0 10.89407201863375 -8.748942408882924 24.99884942979487 1.0484697535729046 0.9372471416138135 0.05321389690793077 0.08413717098019921 208.17992497953088 416441.51186090853 0.013325373514352932 0.015058839374971442 1.7826151416018576e-09 8.748942408882924 -0.11122261195909111 SFGS(ph)PNRAYTHQVVT(ph)R ddPTM_A549_PD325901_60min_R1 1 SFGSPNRAYTHQVVTR 16 1 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 2 S(0.142)FGS(0.857)PNRAY(0.002)T(0.304)HQVVT(0.695)R 63.376000000000005 0.0018 25834000.0 4557.4 5549.1 5010.1 4783.8 5622.9 5865.4 5597.1 5629.5 6689.0 6306.6 5178.5 True False 5020.063893019439 6016.742131568147 5350.115514178752 5079.284461201925 5227.966901951928 5817.63412706717 5810.100703350642 5517.215206242687 6407.884591624083 5908.400199708912 4541.5773292161775 1.1053569121734723 1.3248133182412563 1.1780302582896058 1.1183965598310202 1.1511346219561593 1.2809721612889997 1.2793133931627663 1.2148235747853913 1.4109381228415654 1.3009577447244813 1.0 12.148977729716512 -5.0150337572130645 16.547622414709405 1.2074576073976215 1.0477941338548105 0.07034506688058029 0.10852299154688314 2453449.596668166 103074171.27744554 0.020145502247099455 5587412.454937788 9.659757918788096e-06 5.0150337572130645 -0.15966347354281107 SFGTRPLS(ph)SGFSPEEAQQQDEEFEK ddPTM_A549_MK2206_60min_R1 3 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SFGT(0.002)RPLS(0.441)S(0.441)GFS(0.115)PEEAQQQDEEFEK;S(0.145)FGT(0.126)RPLS(0.631)S(0.095)GFS(0.002)PEEAQQQDEEFEK;S(0.001)FGT(0.002)RPLS(0.332)S(0.332)GFS(0.332)PEEAQQQDEEFEK 201.39 1.2903999999999998e-68 522005500.0 11041.2 11594.600000000002 10322.699999999999 10128.199999999999 15751.0 11631.4 10461.9 11459.7 16983.7 15742.8 17172.5 True False 12904.684628577184 12184.715615459278 11786.614081276597 12609.60945467217 13434.048765223528 12862.227027701556 12362.691808972935 13084.147568859362 13136.919067395862 12186.490546150557 12908.094313110805 0.9997358491152208 0.9439592956090513 0.9131180633925865 0.9768761483145144 1.0407460961590982 0.9964466261016809 0.9577472482840552 1.0136389812065238 1.017727229809023 0.9440968008556219 1.0 13.655988403590147 -6.524598512636646 24.752025059713315 1.0061163374739062 0.9503660916726888 0.2189843379449452 0.03243646010581953 30.75245491652823 442608.9525778474 0.0037008343906725734 0.007747046904204787 2.9881437582879506e-07 6.524598512636646 -0.055750245801217346 SFGTRPLS(ph)SGFSPEEAQQQDEEFEK ddPTM_A549_PD325901_60min_R1 3 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SFGT(0.001)RPLS(0.483)S(0.326)GFS(0.19)PEEAQQQDEEFEK;S(0.139)FGT(0.114)RPLS(0.605)S(0.114)GFS(0.027)PEEAQQQDEEFEK;SFGT(0.001)RPLS(0.561)S(0.119)GFS(0.32)PEEAQQQDEEFEK 344.54 2.266299999999999e-256 773990000.0 27787.6 28815.9 30020.5 31024.1 33430.3 31178.0 30173.5 30075.199999999997 29675.899999999998 32608.0 32622.699999999997 True False 30608.576695850043 31244.317022409832 32057.871657931624 32940.38819615677 31082.27105627406 30924.09670503294 31321.769054072756 29475.32654246202 28428.72512372212 30549.125315083907 28610.314712333806 1.0698441105457255 1.0920647793133333 1.120500490129582 1.1513465869690795 1.0864008791512736 1.0808723013347934 1.0947719159681264 1.0302342647686888 0.9936530027566106 1.067766140367351 1.0 14.804247746886396 -8.3603258692682 2.0435396287631766 0.9966494787449299 1.1026419593127228 0.5757093047507763 0.029748032511889292 0.0899306261489954 0.7333263692642238 0.0037575465983853145 0.004667937261802345 4.3618841905138406e-09 8.3603258692682 0.10599248056779287 SFGTRPLSS(ph)GFSPEEAQQQDEEFEK ddPTM_A549_MK2206_60min_R1 1 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.021)FGT(0.04)RPLS(0.256)S(0.341)GFS(0.341)PEEAQQQDEEFEK 105.54 1.833e-12 5818800.0 1330.3 1160.8 1786.0 1210.6 2174.3 2071.9 1388.3 1786.9 2498.1 1965.8 2204.3 True False 1554.8221172876342 1219.8797618223252 2039.2816558807287 1507.1970543458983 1854.463350277794 2291.147082784089 1640.5361395537261 2040.1985471517407 1932.2843386459729 1521.7244146926064 1656.911474414916 0.9383857504135329 0.7362371379877647 1.2307728489844842 0.909642474941587 1.1192289865290703 1.3827818312340028 0.9901169524660499 1.2313262227073236 1.166196485740613 0.918410209712594 1.0 10.694280808866397 -5.758023842597469 24.99999997906633 1.1036040205637168 0.8373114216496201 0.33772260734471093 0.14477260442666262 66.04019891578838 483356.83460763603 0.01808141279692443 0.06478596687688166 1.745726310596912e-06 5.758023842597469 -0.2662925989140966 SFHFDPLSS(ph)GSR ddPTM_A549_MK2206_60min_R1 2 SFHFDPLSSGSR 12 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SFHFDPLS(0.069)S(0.466)GS(0.466)R;SFHFDPLS(0.184)S(0.408)GS(0.408)R 55.841 0.0054175 3228200.0 570.81 529.03 411.4 501.15 658.77 518.52 454.83000000000004 249.54 479.56 884.61 780.29 True False 667.1487730353716 555.9553673301729 469.7427061754379 623.9317724974784 561.8658056673421 573.3894422342806 537.4667235851193 284.91305918419886 370.9404256999568 684.775986611673 586.5224580915548 1.1374650089378697 0.9478841937939733 0.8008946625912697 1.06378155497685 0.9579612816456488 0.9776086735024491 0.9163617115940376 0.4857666663119055 0.6324402767234769 1.1675187832360565 1.0 9.196042540239933 -8.0142514970863 24.78421361545229 0.7915084152627136 0.9717199512840411 0.13356265204196538 0.1832914696032881 792.818709897232 1378759.9801173406 0.028917712204497282 0.03810757468900898 9.67717295229076e-09 8.0142514970863 0.18021153602132745 SFHFDPLSS(ph)GSR ddPTM_A549_PD325901_60min_R1 2 SFHFDPLSSGSR 12 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SFHFDPLS(0.093)S(0.453)GS(0.453)R;SFHFDPLS(0.086)S(0.457)GS(0.457)R 58.071000000000005 0.0039643000000000005 5076200.0 775.72 642.6700000000001 703.69 747.15 515.97 824.55 869.4000000000001 730.76 651.4 1005.02 809.35 True False 854.4705233451185 696.8300563505609 751.4466350317251 793.2997585992354 479.7300471998678 817.8351381786807 902.4854927539352 716.1844185298701 624.0239233045193 941.5628656822138 709.8050808923647 1.2038100970915577 0.9817202991481948 1.058666182111586 1.1176304311627376 0.6758616697935618 1.1521967934499722 1.2714553854972879 1.00898744994821 0.8791482902883682 1.3265090530184482 1.0 9.471279091240337 -8.527857551134204 24.27062550678975 0.9429909507826156 1.0589478785113207 0.0 0.18718361875804632 161.6983686508407 788240.6648491353 0.025018002768427763 0.028422372346227687 2.9658040156047307e-09 8.527857551134204 0.11595692772870503 SFKDS(ph)ATK ddPTM_A549_PD325901_60min_R1 1 SFKDSATK 8 1 Q9BSC4-2;Q9BSC4-4;Q9BSC4 Q9BSC4-2 NOL10 Nucleolar protein 10 1 S(0.006)FKDS(0.991)AT(0.004)K 54.7 0.0062479 12306000.0 5963.6 5907.5 6110.4 6307.8 7971.3 7548.3 7024.6 6690.8 7724.1 6735.0 7493.7 True False 6569.020281829713 6405.345757373054 6525.0884888201535 6697.418479946807 7411.423387492108 7486.829147430891 7291.924997008612 6557.3467451689385 7399.482938281298 6309.7509505977105 6572.022406478185 0.9995431962244206 0.974638453919324 0.9928585274432772 1.0190802869669184 1.1277233900156074 1.1391971427320395 1.109540495452481 0.997766948984413 1.1259065293185042 0.9600927325472981 1.0 12.682121683644514 -6.533910842413014 22.96284142685197 1.0700427878927525 0.990641463839903 0.26486280673907603 0.05668835009111837 79.46809594631495 165408.9200963455 0.00830943435159487 0.017315698756589077 2.9247527472785524e-07 6.533910842413014 -0.0794013240528495 SFKLS(ph)GFSFK ddPTM_A549_MK2206_60min_R1 3 SFKLSGFSFK 10 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 SFKLS(0.999)GFS(0.001)FK;SFKLS(1)GFSFK;S(0.001)FKLS(0.999)GFS(0.001)FK 103.75 0.000109 89780100.0 10017.5 10467.7 10148.1 9377.6 13427.4 11891.4 11283.2 10567.5 13962.099999999999 14130.9 14095.7 True False 11708.209095639235 11000.461218838343 11587.253175836073 11675.112420976457 11452.247247169227 13149.74005512753 13333.211387893542 12065.475486611465 10799.706642892164 10938.719875663719 10595.348668470862 1.105032921708369 1.0382349428077808 1.0936169765056314 1.1019092232159102 1.0808749768894612 1.2410861092526293 1.2584023239905149 1.1387520943520564 1.0192875176471936 1.0324077307823427 1.0 13.371143443804797 -8.784010842295782 6.265752202112307 1.0087472770282813 1.1330477670735835 0.39931082909138815 0.06262705602613251 0.12303094808388312 16.11668632457544 0.011989562017765893 0.0129272228896328 1.6443306714797775e-09 8.784010842295782 0.12430049004530219 SFKLS(ph)GFSFK ddPTM_A549_PD325901_60min_R1 4 SFKLSGFSFK 10 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 SFKLS(0.987)GFS(0.013)FK;SFKLS(0.787)GFS(0.213)FK;S(0.005)FKLS(0.995)GFSFK;S(0.005)FKLS(0.994)GFSFK 123.64 2.2774000000000003e-05 422730000.0 26770.000000000004 24303.399999999998 27500.6 27665.2 29760.199999999997 26986.1 28449.699999999997 28780.7 28033.399999999998 30056.5 28600.4 True False 29487.670692967593 26351.53281078972 29366.95609054193 29374.016571772132 27669.94621911641 26766.334148812944 29532.368901773203 28206.646360477633 26855.253686774493 28158.727460525628 25082.732112873295 1.1756163786413656 1.0505846289872558 1.1708037209977549 1.1710852087239894 1.1031472207493405 1.0671219557886826 1.1773984097456516 1.1245444169935954 1.0706670057282748 1.1226339831646024 1.0 14.614406880441308 -9.452800523711614 0.6650541193404229 1.0066642644172186 1.131695638586338 0.08115947462045192 0.05457745789503253 0.32749842827523534 0.3183508560966836 0.01656853293463118 0.010296674819940954 3.525327560797085e-10 9.452800523711614 0.12503137416911936 SFLDSGY(ph)R ddPTM_A549_MK2206_60min_R1 2 SFLDSGYR 8 0 P18206;P18206-2 P18206 VCL Vinculin 1 SFLDSGY(1)R;SFLDSGY(1)R 132.08 0.0011359999999999999 27397000.0 5317.1 6416.9 5012.6 4904.0 7834.0 5599.3 5427.9 5554.9 8208.1 7521.099999999999 7711.6 True False 6214.496489385912 6743.492801204059 5723.462053901312 6105.480220148926 6681.62897763705 6191.814209485476 6414.07917012437 6342.32408616778 6348.978455642289 5822.07828636919 5796.59689066736 1.072093955574413 1.1633537622844226 0.9873831425325097 1.0532870122431446 1.1526813238289195 1.0681809217153644 1.1065249647515025 1.0941461353607411 1.0952941140109769 1.0043959233637336 1.0 12.500990445269105 -10.662505411228857 0.8219191258765509 0.9971158464396581 1.0886632752298697 0.34827573922627064 0.04511700119498176 0.5996874854437994 0.6861352367002046 0.03469152282039169 0.008179187011490162 2.175176931548735e-11 10.662505411228857 0.0915474287902116 SFLDSGY(ph)R ddPTM_A549_PD325901_60min_R1 2 SFLDSGYR 8 0 P18206;P18206-2 P18206 VCL Vinculin 1 SFLDSGY(1)R;SFLDSGY(1)R 199.07 6.6013e-15 56167000.0 9444.8 10060.6 9227.099999999999 9856.7 12015.6 11016.5 9726.6 11174.9 9844.3 10580.8 11469.5 True False 10403.629143105722 10908.442069678773 9853.306493059772 10465.525972810123 11171.66570756968 10926.78527650894 10096.751085599746 10952.007852960542 9430.578305475408 9912.72648226937 10058.824211150903 1.03427885056114 1.08446492757931 0.9795684153756957 1.040432336138091 1.1106333576428462 1.086288521117194 1.0037705077305954 1.0887960285476987 0.9375428089319784 0.9854756653645887 1.0 13.296174056076639 -8.762634875601842 24.999957030096166 0.9705063255152991 1.0529952308527804 0.44212225686980144 0.03954962279016481 21.170136712406045 442707.0308545973 0.007211631905256737 0.007890253005318244 1.7272894657800412e-09 8.762634875601842 0.08248890533748121 SFLDSGYR ddPTM_A549_PD325901_60min_R1 2 SFLDSGYR 8 0 P18206;P18206-2 P18206 VCL Vinculin 0 ; 60.681999999999995 0.030993 2102000.0 1786.6 1822.5 1860.9 1855.0 2538.5 2352.5 1909.7 2085.5 2481.3 2234.8 2267.8 False True 1967.9743167745946 1976.088471064307 1987.1918645007565 1969.5791369893343 2360.2045173495817 2333.3420199688903 1982.3746785279375 2043.9030664568986 2377.0195899531855 2093.6943466066455 1988.8749767686486 0.9894912147630257 0.9935709856810024 0.999153736515592 0.9902981132526165 1.1867033096189068 1.1731969315436317 0.9967316707602847 1.027667948126963 1.195157874536267 1.0527028451070857 1.0 10.957736874023837 -6.710390830820484 24.996847725948307 1.0935257737072597 0.9935902175681681 0.3260530904846438 0.06710722180156067 120.01157152822775 58765.12111661104 0.012036853803733191 0.025056690230406624 1.9480906825368522e-07 6.710390830820484 -0.09993555613909155 SFLEDIR ddPTM_A549_MK2206_60min_R1 1 SFLEDIR 7 0 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 86.086 0.036868 2086300.0 524.28 609.71 673.88 605.98 892.52 675.93 703.02 697.75 1035.3 872.81 890.11 False True 612.7656465846507 640.7416347180304 769.4463170576181 754.4451272034756 761.2314903140947 747.4564639539789 830.749633961723 796.658199269756 800.8062030343764 675.6416148071286 669.0711212137461 0.9158453072567936 0.9576584826373556 1.1500217131801829 1.127600793522301 1.1377437557507528 1.1171554716007408 1.2416462280641851 1.1906928486534543 1.1968924941516723 1.0098203216146335 1.0 9.386015765019248 -5.694836991980721 5.2569941394960065 1.1208800957415386 0.9284803257114962 0.5301213098318562 0.06999439383031973 0.14476929933697164 7.463479147176472 0.011843651632666171 0.04763546485236581 2.019124079171447e-06 5.694836991980721 -0.19239977003004238 SFLEDIR ddPTM_A549_PD325901_60min_R1 2 SFLEDIR 7 0 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 110.61 0.023115 7258800.0 2488.32 2718.8 2169.89 1725.8 3169.1 2714.7 2350.76 2464.3999999999996 2595.9 2880.5 2697.1 False True 2740.932414595635 2947.9228176294287 2317.1517840085694 1832.3987464238223 2946.5133488014803 2692.5923832559174 2440.21945818523 2415.2456087156 2486.8033504854193 2698.6247384107946 2365.3737983255687 1.1587734744233327 1.2462820124735643 0.9796133641324956 0.7746761834095585 1.2456861367481522 1.1383369449522034 1.0316422122848592 1.0210841138196995 1.0513363055961005 1.1408872205826968 1.0 11.207852474306067 -5.760419215317548 24.999387010707245 1.0284765967655083 1.2025277757539437 0.21778847552715974 0.11438163946354739 24.543703118495614 601360.0899521668 0.014598185097745747 0.05079399989572698 1.7361241755550295e-06 5.760419215317548 0.17405117898843536 SFLEDIRK ddPTM_A549_MK2206_60min_R1 2 SFLEDIRK 8 1 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 116.37 0.0012993 16737400.0 5380.4 5217.200000000001 5175.5 5176.5 6345.1 4681.5 5046.2 5119.6 7006.1 7509.1 6494.799999999999 False True 6288.479981849498 5482.733195537074 5909.463723410255 6444.742732381915 5411.744195303145 5176.893222671807 5963.029220929202 5845.318978117437 5419.229536442715 5812.789094703553 4881.961912638929 1.2881050885647487 1.1230593957201522 1.2104690346131588 1.3201132757093204 1.1085183154118143 1.06041245616221 1.2214411598524548 1.1973299019364467 1.1100515803724014 1.1906666210678134 1.0 12.253245324422432 -10.548228202509994 0.1837394990781549 0.8576201637311264 1.2559496114986426 0.009901165615947116 0.09113899556941972 5.027647438095847 0.2860071587229346 0.5129202425363921 0.1314599073586877 2.8299046155532073e-11 10.548228202509994 0.3983294477675162 SFLEDIRK ddPTM_A549_PD325901_60min_R1 2 SFLEDIRK 8 1 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 98.458 0.0024590999999999997 37545000.0 6613.9 6388.1 6982.799999999999 6037.0 6502.1 6093.299999999999 5827.4 6201.4 6223.9 7408.6 7220.7 False True 7285.3382591041545 6926.447606038898 7456.694798987525 6409.891778978224 6045.414927027267 6043.678185027174 6049.164895875636 6077.708212095816 5962.33112719527 6940.819731640418 6332.599675788596 1.1504498361009872 1.0937763257830364 1.1775092664544513 1.012205430178247 0.9546497862703495 0.9543755320794942 0.9552419552120727 0.9597493167510168 0.9415297717288252 1.0960458716784558 1.0 12.628582164951094 -6.413741139492117 4.202705903819392 0.9674673608546902 1.1350784425841447 0.6978334471873272 0.045556715112651976 0.055051273561195574 1.6462707912781005 0.003945060811656618 0.009471315824687318 3.857081898922694e-07 6.413741139492117 0.1676110817294545 SFLEDTT(ph)PARDEK ddPTM_A549_MK2206_60min_R1 1 SFLEDTTPARDEK 13 1 Q3YEC7;Q3YEC7-2;G3V154;F2Z2T0 Q3YEC7 RABL6 Rab-like protein 6 1 S(0.005)FLEDT(0.438)T(0.557)PARDEK 40.187 0.043588999999999996 1800000.0 1196.9 1286.8 1139.7 999.58 1359.4 1349.3 1070.3 1112.5 1796.4 1585.3 1784.6 True False 1398.9074586045015 1352.292623632811 1301.326597540462 1244.4771448728516 1159.4340607862905 1492.0820304071492 1264.7596558123985 1270.2002818883602 1389.5182682613283 1227.1796289613335 1341.4345675456427 1.0428443492134052 1.0080943613276903 0.9701006884901108 0.9277210942534533 0.8643239773578001 1.1123032509421156 0.9428411093702971 0.9468969360260214 1.0358449840782484 0.914826305100102 1.0 10.389560969242128 -8.769930244137516 24.987671086350602 1.0169267976117713 0.9756920586729463 0.0 0.06871188645354354 349.364121877381 1028136.9131457664 0.01051204765859387 0.011277517426006382 1.6985164442419312e-09 8.769930244137516 -0.04123473893882501 SFLGTS(ph)GELSVK ddPTM_A549_PD325901_60min_R1 2 SFLGTSGELSVK 12 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SFLGT(0.039)S(0.941)GELS(0.019)VK;SFLGT(0.039)S(0.957)GELS(0.004)VK 98.40700000000001 0.0002512 3106400.0 4772.1 5075.799999999999 4614.2 5630.799999999999 5639.5 5147.7 5308.1 5334.5 5474.6 5223.7 6045.4 True False 5256.5600789656555 5503.5554795216485 4927.347359438653 5978.60172752536 5243.400975218815 5105.778837914493 5510.102650203773 5228.099212665705 5244.521600434328 4893.874690517783 5301.854124948051 0.9914569422479462 1.0380435503920193 0.9293630573977613 1.1276435727254075 0.9889749607681239 0.9630176005577145 1.03927843360982 0.9860888454219646 0.9891863255452573 0.9230496681320395 1.0 12.37228126114617 SFLSEPS(ph)SPGR ddPTM_A549_MK2206_60min_R1 2 SFLSEPSSPGR 11 0 Q69YN4;Q69YN4-3;H0YC41 Q69YN4 KIAA1429 Protein virilizer homolog 1 SFLSEPS(0.5)S(0.5)PGR;SFLSEPS(0.5)S(0.5)PGR 77.37899999999999 0.0011468 3934300.0 2425.8999999999996 2752.8 2910.7 2663.7 3387.1 3175.4 2870.0 2723.3 4228.8 3469.9 4290.9 True False 2835.332612439353 2892.9057618405363 3323.481027867882 3316.306619578038 2888.862076864237 3511.418720340072 3391.4418501182663 3109.33611475647 3270.9835520059582 2686.0471800497903 3225.3511071845783 0.8790771975564317 0.896927393546858 1.0304245700459451 1.0282001894897126 0.895673674233233 1.0886934797635732 1.0514953992338123 0.9640302749769845 1.014148054988411 0.832792180071971 1.0 11.655240503499487 -5.728563097910026 8.015602188016715 1.0076357022921034 0.8869477707271466 0.2026422094177176 0.07051558974417972 0.12868296635474186 25.973868832115084 0.005930793437594941 0.022667132925998257 1.8682582214625716e-06 5.728563097910026 -0.12068793156495683 SFLSEPSS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 SFLSEPSSPGR 11 0 Q69YN4;Q69YN4-3;H0YC41 Q69YN4 KIAA1429 Protein virilizer homolog 1 SFLSEPS(0.001)S(0.999)PGR;SFLSEPS(0.002)S(0.998)PGR 178.71 9.5281e-16 394750000.0 7200.6 7292.0 7904.0 8166.0 9210.8 7181.8 7252.8 8380.1 10929.7 10559.2 10676.1 True False 8415.885242232087 7663.131653349751 9024.90605155727 10166.670366585664 7855.903521472982 7941.773309106991 8570.539878236157 9568.004837979912 8454.140401144423 8173.869386317104 8024.929724629623 1.0487176250780823 0.9549157333839993 1.1246087331903456 1.266885906225788 0.9789373603312842 0.9896377390985228 1.0679893995746756 1.1922851870732747 1.0534846648186205 1.0185596219279485 1.0 12.97027304308117 -9.821131234028702 1.2210282204081804 1.0097583586711074 1.0754022651362596 0.07553026546220287 0.08815716354298317 0.7856581820285239 2.371884713450659 0.026218527025579603 0.017029951666909 1.5096239108276186e-10 9.821131234028702 0.06564390646515217 SFLSEPSS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 SFLSEPSSPGR 11 0 Q69YN4;Q69YN4-3;H0YC41 Q69YN4 KIAA1429 Protein virilizer homolog 1 SFLSEPS(0.003)S(0.997)PGR;SFLSEPS(0.002)S(0.998)PGR 185.3 1.1506e-18 671120000.0 14512.7 13905.0 14595.8 15447.699999999999 16266.5 14799.8 15179.0 15646.4 15030.3 16395.2 16197.9 True False 15986.018620314931 15076.823149601736 15586.358759675497 16401.869344727824 15123.997156378553 14679.275335658043 15756.645151267514 15334.32027763666 14398.628760276197 15360.004273977669 14205.660986948102 1.1253273349971247 1.06132500018507 1.097193490256874 1.1546009270387037 1.0646457894690153 1.0333398318561233 1.1091807108267913 1.0794513744714553 1.0135838644541348 1.081259385824437 1.0 13.79417834098935 -8.753010707488485 3.6794636905960663 1.0057474076539683 1.0906446614234524 0.2621792366425816 0.03842576293338108 0.11060260736696241 3.1613175369090425 0.00544904091881183 0.005964672880936931 1.7659942797310994e-09 8.753010707488485 0.0848972537694841 SFPIKPVPS(ph)PSWSGSCR ddPTM_A549_MK2206_60min_R1 1 SFPIKPVPSPSWSGSCR 17 1 Q9P0U3;Q9P0U3-2 Q9P0U3 SENP1 Sentrin-specific protease 1 1 SFPIKPVPS(0.967)PS(0.023)WS(0.004)GS(0.005)CR 69.947 0.00038267 4770000.0 2655.9 1979.0 1884.1 1935.1 2833.8 2321.7 1875.0 1714.5 3148.8 2587.6 3078.4 True False 3104.1509894792357 2079.7226470075634 2151.293710999374 2409.199586869941 2416.9517739121598 2567.3807529802693 2215.6632296068815 1957.535625436039 2435.601827600352 2003.0593628337513 2313.9483204821845 1.3414953834545396 0.8987766185608619 0.929706896198565 1.0411639557999757 1.0445141546672534 1.1095238083991756 0.9575249412420662 0.8459720591461284 1.0525739948646808 0.8656456780401864 1.0 11.176140928443425 -7.776227900730083 24.928504273428352 1.0046089866679104 1.0458956579793135 0.09073464044629898 0.12635129877922596 830.5941798112133 1400100.2851926684 0.018136909289125484 0.02511329511909567 1.6740641622005038e-08 7.776227900730083 0.04128667131140307 SFPIKPVPS(ph)PSWSGSCR ddPTM_A549_PD325901_60min_R1 1 SFPIKPVPSPSWSGSCR 17 1 Q9P0U3;Q9P0U3-2 Q9P0U3 SENP1 Sentrin-specific protease 1 1 SFPIKPVPS(0.454)PS(0.454)WS(0.049)GS(0.043)CR 71.756 0.00026272 6749800.0 3332.0 3505.6 3639.5 3739.8 3120.5 3300.0 3227.9 3449.7 3632.1 4111.7 5324.8 True False 3670.2621871112456 3801.0292149042702 3886.4983560914116 3970.7989522979597 2901.3268451405843 3273.125894111512 3350.739500874657 3380.8930272627035 3479.4554679679854 3852.0865602928884 4669.883356688285 0.7859430111577915 0.8139452154539091 0.8322474158856888 0.8502993863028538 0.6212846496444618 0.7009009956155943 0.717521026745919 0.7239780459228242 0.7450840207785171 0.8248785389416345 1.0 12.189170799730004 -10.588432238323142 0.8244760661771433 1.0038934769752073 0.7539093082939927 0.28813657557309724 0.07998712325894491 0.32549593638797997 0.38642358649488256 0.050209724761482735 0.01302704864179253 2.5796914346137026e-11 10.588432238323142 -0.24998416868121454 SFPSS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 SFPSSPSK 8 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 SFPS(0.025)S(0.951)PS(0.025)K;SFPS(0.182)S(0.817)PS(0.001)K 114.86 0.0013177 21523000.0 8215.099999999999 9959.8 9397.3 8500.8 12156.1 9793.2 8868.1 9743.1 13762.4 14244.4 17665.8 True False 9601.608040088438 10466.711278254643 10729.978446141078 10583.496381615416 10367.953793088302 10829.509923799964 10479.318979454294 11124.214261992354 10645.238374036795 11026.580146834554 13278.894308723417 0.7230728565842092 0.7882215969878349 0.8080475826283324 0.7970163882291548 0.7807844201513973 0.8155430468849837 0.7891710511296129 0.8377364864395698 0.8016660217743828 0.8303839077618661 1.0 13.696847402609873 -11.510416991197188 0.33662372184005873 1.1561732397139233 0.7778082351881591 0.23549129330443508 0.056867117191535754 0.9693423062512995 0.09153493756607214 0.14421321997246403 0.008422518634356098 3.0873296855340766e-12 11.510416991197188 -0.37836500452576416 SFPSS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 SFPSSPSK 8 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;Q96KQ7-2;A2ABF9;A0A0G2JK64;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 SFPS(0.077)S(0.845)PS(0.077)K 90.62899999999999 0.0026305 3265900.0 2416.2 2546.2 2725.8 2725.2 3296.6 2753.3 2583.4 2913.2 3063.5 2986.6 3379.9 True False 2661.4908452875716 2760.777209889676 2910.789179566965 2893.5294146217416 3065.058188652601 2730.878037653705 2681.712700690722 2855.0939406388097 2934.7517486082224 2798.025566303655 2964.1937269513874 0.897880196253185 0.931375430960472 0.9819834490239786 0.9761606970262626 1.034027621333964 0.9212886502065293 0.9047022386923438 0.9631941106545744 0.9900674581166983 0.9439415315075803 1.0 11.533424023729166 -7.708048338872311 0.008327052739734199 1.9309220504267512 7.82874436855343e-08 0.0 0.041581399633976744 2567.530750338475 9.773740669103994 1113.2067749037012 1152.5585238586636 1.9586266576732352e-08 7.708048338872311 -1.9309219721393076 SFREPAPAEALPQQYPEPAPAALCGPPPRAPS(ph)R ddPTM_A549_MK2206_60min_R1 2 SFREPAPAEALPQQYPEPAPAALCGPPPRAPSR 33 2 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 SFREPAPAEALPQQYPEPAPAALCGPPPRAPS(1)R;SFREPAPAEALPQQYPEPAPAALCGPPPRAPS(1)R 119.7 9.9315e-22 21153000.0 2216.2 3544.0 3315.5 2662.3 3873.3 2883.8 2335.0 3620.8 5749.0 4401.200000000001 3772.6000000000004 True False 2590.2403791121205 3724.3744623521 3785.6877547998647 3314.5636195151887 3303.542700929486 3188.9618018884853 2759.239275270439 4134.059488234947 4446.860679266521 3406.9658632338483 2835.759301536867 0.913420394216221 1.3133605734216016 1.3349820461659685 1.1688451899704002 1.164958781635345 1.1245530606776806 0.9730160362253041 1.4578315888779607 1.5681375626120675 1.2014298468094278 1.0 11.46951936688122 -8.265730852278564 24.974094329138037 1.2899992669361813 1.1571579988141727 0.1604213264360087 0.17788407564327685 856.1792623536797 4982498.422050831 0.03900112251709314 0.04796793929234367 5.423368917165663e-09 8.265730852278564 -0.13284126812200858 SFREPAPAEALPQQYPEPAPAALCGPPPRAPS(ph)R ddPTM_A549_PD325901_60min_R1 2 SFREPAPAEALPQQYPEPAPAALCGPPPRAPSR 33 2 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 SFREPAPAEALPQQYPEPAPAALCGPPPRAPS(1)R;SFREPAPAEALPQQYPEPAPAALCGPPPRAPS(1)R 133.77 2.4745e-30 41526000.0 4111.0 4869.9 4969.5 5149.0 4713.299999999999 5852.1 5182.8 5453.9 4917.1 5539.1 5434.4 True False 4528.345693641756 5280.303563915533 5306.760154031119 5467.0420357725525 4382.254068002281 5804.442437857569 5380.034290136981 5345.117685998217 4710.451386675853 5189.360280691279 4766.003251499932 0.950134830943856 1.1079101891619028 1.1134612953444802 1.1470915455317814 0.9194819719485338 1.2178846995185797 1.1288356314997907 1.1215094501490381 0.988344140385008 1.0888285229470018 1.0 12.218564220437276 -8.77003853467131 24.968133847168705 0.9944958352858402 1.0917864730259634 0.06401273814746011 0.08563458914230965 187.53603817030702 544519.653417733 0.013200033018045705 0.01415836622266837 1.6980929750746648e-09 8.77003853467131 0.09729063774012325 SFRS(ph)PSKLER ddPTM_A549_PD325901_60min_R1 1 SFRSPSKLER 10 2 Q6IQ21 Q6IQ21 ZNF770 Zinc finger protein 770 1 S(0.003)FRS(0.996)PS(0.001)KLER 52.555 0.004713 2651200.0 730.87 922.48 922.47 572.18 1168.9 830.08 824.12 840.53 1060.6 1079.8 891.14 True False 805.067384361943 1000.2206270438413 985.0743614627406 607.5222590849361 1086.8004964860854 823.3201036921465 855.4823375757676 823.7649697669706 1016.0266703358509 1011.621243720179 781.5354294018935 1.0301099017072821 1.2798148227384996 1.2604346833215416 0.7773444891038029 1.3905965815494894 1.0534648497282213 1.094617474003022 1.0540340703394537 1.3000391691946875 1.2944022825610983 1.0 9.610167466280307 -11.201498963373737 1.6441420351165388 1.000095876546859 1.1616622736339874 0.0 0.18349968907925446 0.6636734289307822 3.2316101455315653 0.11394995343447079 0.023841236656991685 6.287833549719337e-12 11.201498963373737 0.1615663970871284 SFS(ph)ADNFIGIQR ddPTM_A549_MK2206_60min_R1 4 SFSADNFIGIQR 12 0 Q8N7R7-3;Q8N7R7;Q8N7R7-2 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 S(0.001)FS(0.999)ADNFIGIQR;S(0.001)FS(0.999)ADNFIGIQR;SFS(1)ADNFIGIQR;S(0.001)FS(0.999)ADNFIGIQR 153.81 2.746e-13 134924000.0 7400.570000000001 7369.900000000001 7831.400000000001 6642.0 9694.5 8198.0 7319.7 7650.5 11657.4 10866.300000000001 11135.7 True False 8649.60528943497 7744.996430611949 8942.01027987925 8269.290298170708 8268.451892226492 9065.506918608024 8649.594742268535 8734.981803673616 9017.017513042538 8411.595283026889 8370.398360314917 1.0333564684858736 0.9252840901016044 1.0682896912379243 0.9879207586315635 0.9878205954244943 1.083043665112607 1.0333552084303803 1.0435562834246017 1.0772507024030447 1.0049217397952397 1.0 13.031080569179029 -7.227528695352909 24.941846243931565 1.0405685403053546 0.9994171826126473 0.1953593526748585 0.04020949752104686 825.8831587091073 607451.1346146306 0.006103291149438865 0.010570848650712098 5.9220395660011004e-08 7.227528695352909 -0.04115135769270728 SFS(ph)ADNFIGIQR ddPTM_A549_PD325901_60min_R1 4 SFSADNFIGIQR 12 0 Q8N7R7-3;Q8N7R7;Q8N7R7-2 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 S(0.082)FS(0.918)ADNFIGIQR;S(0.036)FS(0.964)ADNFIGIQR;S(0.025)FS(0.975)ADNFIGIQR;S(0.002)FS(0.998)ADNFIGIQR 231.74 1.1581999999999998e-40 282261700.0 12356.699999999999 12913.300000000001 11809.779999999999 12686.199999999999 14879.800000000001 13777.0 13416.7 13126.7 14027.000000000002 14279.5 15574.7 True False 13611.14308747825 14001.549110230288 12611.262688776264 13469.797761549378 13834.694180523265 13664.804679749785 13927.27986039995 12864.877670803064 13437.493970206466 13377.889933045284 13659.110636157802 0.9964882377808278 1.0250703346062662 0.9232857851954342 0.9861401756196861 1.0128546835180225 1.0004168678139929 1.0196329930539008 0.9418532445844402 0.9837751760085549 0.979411492402142 1.0 13.737575930338846 -6.525666065262593 24.99080406248418 0.9924652682606194 0.9807524487284922 0.01840027467513128 0.029534905134484504 274.7251751898138 2463161.1111571323 0.004075441568991555 0.008520513842951515 2.980807530590487e-07 6.525666065262593 -0.011712819532127217 SFS(ph)ASQSTDREGASPVTEVR ddPTM_A549_MK2206_60min_R1 2 SFSASQSTDREGASPVTEVR 20 1 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.031)FS(0.957)AS(0.011)QSTDREGASPVTEVR;S(0.003)FS(0.967)AS(0.004)QS(0.01)T(0.016)DREGASPVTEVR 186.82 2.3296e-44 30308000.0 5120.1 5826.799999999999 5456.7 5058.5 5907.9 5669.9 4745.7 5047.9 9028.5 9807.4 9123.3 True False 5984.247705573491 6123.359231724951 6230.542111782966 6297.832727084691 5038.855736147803 6269.885054624982 5607.932260664205 5763.4552835454015 6983.559165551882 7591.901528464881 6857.732819729442 0.8726277128145081 0.8929130651034224 0.9085425570762874 0.9183549275886137 0.7347699113694256 0.9142795759827149 0.8177530983024583 0.8404315879679878 1.0183480968317171 1.1070570592402293 1.0 12.743515982000654 -8.764483850221755 24.989707252539677 1.0086643885501227 0.8628543426706945 0.640099204158402 0.05846819252437318 34.418193706842246 282511.53222319303 0.008405155772135966 0.009135346807777648 1.7199512985685104e-09 8.764483850221755 -0.14581004587942825 SFS(ph)ASQSTDREGASPVTEVR ddPTM_A549_PD325901_60min_R1 2 SFSASQSTDREGASPVTEVR 20 1 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.01)FS(0.983)AS(0.007)QS(0.001)T(0.001)DREGASPVTEVR;S(0.002)FS(0.959)AS(0.038)QS(0.001)T(0.001)DREGASPVTEVR 178.53 1.5489e-35 50477000.0 12065.1 12248.2 10668.5 11754.7 12502.2 10519.2 10814.4 11878.4 12832.599999999999 13426.7 15819.3 True False 13289.940070142813 13280.398799061646 11392.528564902103 12480.761122139362 11624.088602248557 10433.535122829642 11225.947909866753 11641.475993575465 12293.290448568587 12578.935870585039 13873.62638680495 0.9579283526607525 0.9572406253993176 0.8211644343931165 0.8996033750778869 0.8378550984553035 0.75204094675296 0.8091574327346471 0.8391083678487653 0.8860906374313638 0.9066797331769525 1.0 13.760057318360328 -10.084392398774128 0.8376461437794394 0.9913771677603359 0.8586723617503306 0.195212466484457 0.06392772948044025 0.42270267249799537 0.592124194658208 0.02908148046919075 0.012771587073952598 8.233938165090802e-11 10.084392398774128 -0.13270480601000534 SFS(ph)EDTLMDGPAR ddPTM_A549_MK2206_60min_R1 2 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 S(0.37)FS(0.621)EDT(0.009)LMDGPAR;S(0.131)FS(0.868)EDT(0.001)LMDGPAR 140.45 1.5718e-10 15666300.0 3048.9500000000003 3144.49 2852.5 2659.27 3518.5299999999997 3322.36 3052.42 3204.1400000000003 4557.47 4415.41 4400.81 True False 3563.5382203293493 3304.531109797278 3257.0273927210415 3310.7912693791664 3000.958897968507 3673.929929995918 3607.0052028355412 3658.336657267213 3525.210321784098 3417.965814364574 3307.967420822896 1.077259164615012 0.9989612016720638 0.984600807196226 1.0008536506552315 0.9071911890903637 1.1106306267919603 1.0903992524624853 1.1059167736171833 1.0656726240995325 1.0332525625401456 1.0 11.691729310571306 -7.278100760338402 24.959054474930912 1.0479013140814482 0.993945195776396 0.3207875909135951 0.049137527162754296 1049.4563778400727 1572101.7296794911 0.008253666552951703 0.013214849676966966 5.2710755340526964e-08 7.278100760338402 -0.0539561183050522 SFS(ph)EDVISHK ddPTM_A549_PD325901_60min_R1 1 SFSEDVISHK 10 0 F8W9J4;Q03001;E9PHM6;Q03001-14;Q03001-8;H0YC82;Q03001-10;A0A494C1D7;F6QMI7 F8W9J4;A0A494C1D7;F6QMI7 DST Dystonin 1 S(0.409)FS(0.59)EDVIS(0.001)HK 63.727 0.0019673 3972300.0 1311.3 1086.2 1034.6 978.73 1418.0 1173.2 1006.5 1259.0 1289.7 1327.4 1567.4 True False 1444.4222106719612 1177.737886019231 1104.8141775552062 1039.1839292428947 1318.404571834433 1163.6458481732207 1044.8029082779328 1233.8882573336068 1235.498394052561 1243.587737464499 1374.6197365672376 1.0507794790427187 0.8567735895894606 0.8037234939709202 0.7559792003554319 0.9591049340865805 0.8465219996616151 0.7600668610266442 0.8976215199811755 0.8987928524421621 0.904677638755604 1.0 10.42481686326859 -9.893653306876177 0.706594084524107 0.9934897324582971 0.8599542104055938 0.09587069342949162 0.08508293247372443 0.613597828900975 0.6298386050932531 0.03872864349416484 0.01758925460803351 1.2774581845073418e-10 9.893653306876177 -0.13353552205270325 SFS(ph)EGGER ddPTM_A549_MK2206_60min_R1 1 SFSEGGER 8 0 Q07352;G3V2D5;G3V2P5;G3V515 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 S(0.003)FS(0.997)EGGER 97.565 0.0024565999999999998 75832000.0 3039.1 2708.2 2511.6 2182.2 3215.1 2326.0 2332.4 2379.7 3133.6 3172.1 3101.9 True False 3552.025781138728 2846.0358123425394 2867.782646646158 2716.8390979626793 2742.1630490172174 2572.1357761261593 2756.1668889253847 2717.0297625256007 2423.844603330938 2455.5204068808707 2331.6126219151784 1.5234202061494702 1.2206297845500664 1.2299567345327593 1.165218901470467 1.1760800328679017 1.1031574250157457 1.1820861077092124 1.1653006751583983 1.039557163376479 1.0531425262503147 1.0 11.187112401302972 -2.0000000000000004 0.2217760688157231 0.9969717304720277 3.2788512305222026 0.7700280387839085 0.06390184156159386 14.104644138481287 0.16429590244580985 0.038327602555782866 11.71564791911948 0.00999999999999999 2.0000000000000004 2.281879500050175 SFS(ph)EGGER ddPTM_A549_PD325901_60min_R1 1 SFSEGGER 8 0 Q07352;G3V2D5;G3V2P5;G3V515 Q07352 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 S(0.038)FS(0.962)EGGER 128.57 0.0010655999999999999 68859000.0 3874.1 4199.4 5406.7 4447.6 5172.2 4561.4 5246.1 4661.4 6027.5 7720.9 6388.9 True False 4267.395780038316 4553.29817579558 5773.631175128296 4722.318150767524 4808.922515121338 4524.253470727348 5445.743206276074 4568.424720202444 5774.185136195871 7233.401056342959 5603.105802573953 0.761612564602646 0.8126382646038716 1.0304340804123324 0.842803673026875 0.8582601658016553 0.807454585035499 0.9719151124675193 0.8153379359896796 1.0305329471992706 1.2909627822876522 1.0 12.452011019673096 -8.77014035301841 24.999475421893486 1.0144183477382605 0.8674958330053775 0.43527045177028256 0.11104368004362021 117.89963030007715 338746.0488239246 0.012264614510612849 0.013154569480815517 1.6976949116378097e-09 8.77014035301841 -0.14692251473288298 SFS(ph)EHDLAQLR ddPTM_A549_PD325901_60min_R1 1 SFSEHDLAQLR 11 0 Q8WWL2-4;Q8WWL2-3;Q8WWL2-2;Q8WWL2 Q8WWL2-4 SPIRE2 Protein spire homolog 2 1 S(0.141)FS(0.859)EHDLAQLR 89.43 9.281e-05 2903700.0 269.05 387.28 433.06 529.97 407.32 367.71 378.97 459.86 508.34 757.05 534.87 True False 296.3637579358584 419.91744475927817 462.45005580133125 562.705043250802 378.7112483777157 364.71549167386206 393.3919107303413 450.68773154680883 486.97623759996804 709.2497338010387 469.0843808202872 0.6317919974602597 0.89518530552002 0.9858568622401058 1.19958170908782 0.807341416304384 0.7775050856225155 0.8386378374876123 0.9607817910259383 1.0381420859683994 1.5119875288978386 1.0 8.873703653754506 -8.505255616444664 4.6791726991243765 1.0175635393214153 0.8876689025736603 0.20670042786441123 0.19971017866844187 0.279040492317516 15.791855412650023 0.02292728754397094 0.027037524122152063 3.124239965029118e-09 8.505255616444664 -0.12989463674775503 SFS(ph)ENGDR ddPTM_A549_MK2206_60min_R1 1 SFSENGDR 8 0 P47974 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 1 S(0.036)FS(0.964)ENGDR 155.5 0.00041833 71671000.0 5683.4 5011.7 4377.6 4596.3 6651.9 5185.1 5172.7 5666.3 7710.6 6839.5 6311.2 True False 6642.618974210734 5266.774123298541 4998.409505477872 5722.393706335747 5673.414321718644 5733.7838404091835 6112.512633486676 6469.515377315971 5964.16141129804 5294.452199760949 4743.954859741152 1.4002281156977916 1.1102074701414666 1.0536376616683498 1.2062496114577241 1.1959250223616602 1.2086505900526296 1.2884845691428433 1.3637388146793985 1.257212934699692 1.116041858806775 1.0 12.211874566903209 -10.684304823728413 1.0003673520129697 1.002964578442374 1.2256675512050668 0.2857355241904851 0.10021535983973427 0.4132585138367144 0.7504077061946828 0.06307297860055648 0.017544632330533185 2.068688862451663e-11 10.684304823728413 0.2227029727626928 SFS(ph)ENGDR ddPTM_A549_PD325901_60min_R1 1 SFSENGDR 8 0 P47974 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 1 S(0.005)FS(0.995)ENGDR 171.5 5.3595e-06 69611000.0 4571.3 4405.8 4439.9 4169.5 4423.9 4045.6 4439.3 5372.8 5887.2 7091.6 7975.8 True False 5035.375010786804 4777.092228156446 4741.218313287608 4427.040545378453 4113.180525626479 4012.6539749144054 4608.23999077817 5265.635289119939 5639.781457289478 6643.8351657399735 6994.827162761879 0.7198712553747513 0.6829464284104242 0.6778177934872028 0.6329020635343983 0.5880317597443546 0.5736602036825775 0.658806841620176 0.7527899069690273 0.8062788866769702 0.9498212051770958 1.0 12.77207269451717 -9.317002346734899 0.6581999003413829 0.975232654728819 0.6419026076925781 0.8683871498220004 0.04788925231511271 0.16249958467048028 0.15589468467181097 0.02080019403681605 0.014232175609576611 4.819451933998663e-10 9.317002346734899 -0.3333300470362409 SFS(ph)EPFGR ddPTM_A549_MK2206_60min_R1 2 SFSEPFGR 8 0 A0A0S2Z4A4;A0A494C1P6;P58340-2;P58340-5;P58340-4;P58340;P58340-3;A0A494C127;A0A494C1S3;A0A494C175 A0A0S2Z4A4 MLF1 Myeloid leukemia factor 1 1 S(0.01)FS(0.99)EPFGR;S(0.003)FS(0.997)EPFGR 71.45100000000001 0.0061201 9065300.0 1601.69 2035.8400000000001 1956.65 1830.67 2400.0 1979.1599999999999 1880.9 1899.37 2614.7 2822.5 3091.4 True False 1872.0161144391716 2139.4555602242945 2234.132391925547 2279.1842321819004 2046.963179260776 2188.5933975399175 2222.6351832360456 2168.61151407667 2022.4746248179113 2184.8952896886153 2323.7200617004364 0.8056117194552601 0.920702796987817 0.9614464447540503 0.9808342535520626 0.8808992154428718 0.9418489918868984 0.9564986849618969 0.9332498995123096 0.8703607022861085 0.9402575317483669 1.0 11.182220562560131 SFS(ph)EPFGR ddPTM_A549_PD325901_60min_R1 2 SFSEPFGR 8 0 A0A0S2Z4A4;A0A494C1P6;P58340-2;P58340-5;P58340-4;P58340;P58340-3;A0A494C127;A0A494C1S3;A0A494C175 A0A0S2Z4A4 MLF1 Myeloid leukemia factor 1 1 S(0.002)FS(0.998)EPFGR;S(0.002)FS(0.998)EPFGR 111.61 0.0015034 17100800.0 2947.3999999999996 3903.3999999999996 3387.1 3652.4 4418.9 3415.2 3210.2 2966.8 3327.7 2909.6 2846.9 True False 3246.617878238798 4232.353216983489 3616.96897428691 3878.0004527977576 4108.531708377413 3387.3877435059526 3332.3659176888436 2907.6248465904264 3187.8483413884674 2725.8873594445568 2496.7493479860063 1.3003379297395914 1.6951454179401313 1.4486712401485253 1.553219771910998 1.645552330549939 1.3567191861843786 1.334681801509985 1.1645641757895526 1.2767995089134332 1.0917745354147719 1.0 11.28583527910865 -8.786658652620433 0.3513496108911634 0.9960491749777 1.5714485123105395 0.6705557410927232 0.12103684467229028 0.45501983716789396 0.16021059344819327 0.08639612821472858 0.07755013846892372 1.6343360008853359e-09 8.786658652620433 0.5753993373328395 SFS(ph)KEVEER ddPTM_A549_MK2206_60min_R1 4 SFSKEVEER 9 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.004)FS(0.996)KEVEER;S(0.047)FS(0.953)KEVEER;S(0.006)FS(0.994)KEVEER;S(0.004)FS(0.996)KEVEER 109.16 0.00019427 2109940000.0 41881.100000000006 50592.9 47184.1 44859.200000000004 67441.9 51005.2 49333.1 52907.9 72024.2 67834.0 70000.1 True False 48949.60578541317 53167.862510252155 53875.51488199433 55849.70601380603 57521.28584974477 56402.53640948836 58296.285692010264 60407.7568486483 55710.83369901327 52510.252287240946 52617.14326552267 0.9302976700654015 1.010466536390058 1.0239156202403752 1.0614355426323858 1.093204272977616 1.0719422018953673 1.1079333098307687 1.1480622682955581 1.0587962447500971 0.9979685142208821 1.0 15.683245302159243 -5.2175245192930175 1.404974486589928 1.051784052774247 0.8724953774105867 0.4437400025392513 0.04332330249833754 1.2481381358883716 1.9973078303013674 0.007363421754235824 0.32349153336659076 6.0600398593449155e-06 5.2175245192930175 -0.17928867536366033 SFS(ph)KEVEER ddPTM_A549_PD325901_60min_R1 6 SFSKEVEER 9 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.077)FS(0.923)KEVEER;S(0.064)FS(0.936)KEVEER;S(0.036)FS(0.964)KEVEER;S(0.043)FS(0.957)KEVEER;S(0.001)FS(0.999)KEVEER;S(0.018)FS(0.982)KEVEER 124.86 6.7931e-05 3634323000.0 64304.0 66193.40000000001 64668.3 64829.100000000006 74841.3 69557.4 72964.5 74196.7 69606.5 70724.7 72101.9 True False 70832.09474189719 71771.75012375758 69057.07972007865 68833.4462694315 69584.70527646843 68990.94759608239 75741.20397520636 72716.78861231478 66681.1808681241 66259.13037204724 63233.82339160219 1.1201615044410567 1.1350215165589572 1.0920908465776848 1.0885542353362263 1.1004348866513372 1.0910450119207054 1.1977957351423607 1.1499666588557411 1.0545176187619192 1.047843176613085 1.0 15.948408833306814 -9.046865381448631 2.3917196578946025 1.0202354812709418 1.1206003628286227 0.5748129448255311 0.03331289787662554 0.13185565990641365 1.5395689970535948 0.006962481457983739 0.006874670123469385 8.977070142228671e-10 9.046865381448631 0.10036488155768097 SFS(ph)KEVEERS(ph)R ddPTM_A549_MK2206_60min_R1 3 SFSKEVEERSR 11 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 2 S(0.473)FS(0.527)KEVEERS(1)R;S(0.451)FS(0.549)KEVEERS(1)R;S(0.128)FS(0.872)KEVEERS(1)R 61.692 0.002421 57920700.0 6524.0 8289.6 7237.400000000001 6732.200000000001 12420.8 10610.7 9716.6 11680.2 14172.2 12572.400000000001 13022.4 True False 7625.091703513884 8711.50523225564 8263.77214796819 8381.589302219938 10593.716773734264 11733.517231187383 11481.980446292398 13335.904119112298 10962.219328352932 9732.286108088985 9788.57868004392 0.7789784352512015 0.8899663083891719 0.844225951293177 0.856262137352747 1.0822528091163826 1.1986946843578659 1.1729977171967607 1.3623943327237436 1.1198989849978656 0.9942491577383242 1.0 13.256883677676406 -6.768337589093262 5.129217630960888 1.1033778735530693 0.8439048293331071 0.6550123011481468 0.10012011596031242 0.1088848749958749 8.051469927152311 0.016623823938953494 0.03339325652398834 1.7047567193574628e-07 6.768337589093262 -0.2594730442199622 SFS(ph)KEVEERS(ph)R ddPTM_A549_PD325901_60min_R1 4 SFSKEVEERSR 11 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 2 S(0.133)FS(0.867)KEVEERS(1)R;S(0.131)FS(0.869)KEVEERS(1)R;S(0.219)FS(0.781)KEVEERS(1)R;S(0.099)FS(0.901)KEVEERS(1)R 61.096000000000004 0.006592699999999999 162843000.0 20851.9 20473.6 20879.5 19100.9 23644.2 20382.6 20666.6 19624.7 22160.699999999997 22308.3 22634.200000000004 True False 22968.769537642533 22198.98212410546 22296.508428633206 20280.719211708674 21983.51296006184 20216.61086342949 21453.078772197463 19233.26996322068 21229.36284491013 20899.75013084171 19850.336890015413 1.1570972152717303 1.1183176510858817 1.1232307316581716 1.0216813610810676 1.107462965584196 1.018451776181104 1.0807412937655592 0.9689140325318552 1.0694711612470598 1.052866268549535 1.0 14.276875871826006 -2.000000000000006 0.2656866586867925 1.021359751914585 1.9885182130858114 0.5442111878975968 0.03777247556456235 24.642288295402487 0.3037057988882434 0.015243912529023579 11.051554008732381 0.009999999999999856 2.000000000000006 0.9671584611712265 SFS(ph)LDIK ddPTM_A549_PD325901_60min_R1 2 SFSLDIK 7 0 Q9BY84;Q13202 Q9BY84 DUSP16;DUSP8 Dual specificity protein phosphatase 16;Dual specificity protein phosphatase 8 1 S(0.003)FS(0.997)LDIK;S(0.003)FS(0.997)LDIK 85.73100000000001 0.013471 5958000.0 1465.02 1475.63 2004.5 1677.54 1995.17 1805.03 1815.02 1835.4 1768.2199999999998 1666.7199999999998 2143.9 True False 1613.7477519092772 1599.986518823936 2140.5374240377064 1781.1578358302352 1855.0361421628388 1790.3304341357896 1884.0915793170532 1798.7915071565553 1693.9078625506872 1561.4830147557855 1880.2138913018377 0.8582788157106623 0.8509598435719057 1.138454212012881 0.9473166026855502 0.9866091037538468 0.9521950893024124 1.0020623653687244 0.956695148077591 0.9009123219368652 0.8304815861532824 1.0 10.8766810754841 SFS(ph)LDPLMER ddPTM_A549_MK2206_60min_R1 3 SFSLDPLMER 10 0 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4 F8VV64 TNS2 Tensin-2 1 S(0.11)FS(0.89)LDPLMER;S(0.012)FS(0.988)LDPLMER;S(0.441)FS(0.559)LDPLMER 100.48 0.00045045 7114700.0 1252.1200000000001 1416.3899999999999 1465.06 1323.4299999999998 1899.52 1571.9099999999999 1391.17 1501.48 2366.4 2226.77 2070.91 True False 1463.4472446051209 1488.4782011091672 1672.8275379421166 1647.6704094110291 1620.1031242789288 1738.2484728505904 1643.927581403844 1714.3193880896508 1830.4141783642892 1723.74111044107 1556.6458927916308 0.9401285490694541 0.9562086072380828 1.074635885841789 1.0584747738974587 1.0407653608191496 1.1166627432095557 1.0560703555101318 1.101290535007454 1.1758706246811808 1.1073431140782937 1.0 10.604225080835306 -5.751124134791862 4.308801987930973 1.0817505760156085 0.9433970683702506 0.5845879082629178 0.0433800855543863 0.14448822229887853 6.216982944357481 0.00869122132884647 0.033907809182500664 1.7736824351444754e-06 5.751124134791862 -0.13835350764535792 SFS(ph)LDPLMER ddPTM_A549_PD325901_60min_R1 7 SFSLDPLMER 10 0 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2;Q63HR2-4 F8VV64 TNS2 Tensin-2 1 S(0.015)FS(0.985)LDPLMER;S(0.012)FS(0.988)LDPLMER;S(0.014)FS(0.986)LDPLMER;S(0.016)FS(0.984)LDPLMER;S(0.01)FS(0.99)LDPLMER;S(0.001)FS(0.999)LDPLMER;S(0.097)FS(0.903)LDPLMER 100.48 0.00035745 18846920.0 4183.889999999999 4860.5 4433.02 4688.74 5362.45 4881.15 4878.389999999999 4695.299999999999 4844.08 5415.78 5123.3099999999995 True False 4608.635432782971 5270.11139292623 4733.8713951148075 4978.352820898852 4985.810011448202 4841.399532740122 5064.039801007438 4601.648558108406 4640.500163341966 5073.826726537202 4493.175349337943 1.0256967677573592 1.1729146946608187 1.05356925271397 1.1079809786707742 1.1096406491642592 1.0775006885617069 1.127051451876591 1.024141770649224 1.0327885743488134 1.1292296276139806 1.0 12.133519649813875 -8.338124157333349 6.3465477389637375 1.0162744420076804 1.0977919404326395 0.0875733066024218 0.050133241682119745 0.1293639599111369 8.775358151210954 0.005505452543673531 0.006669681078624653 4.5906675477485205e-09 8.338124157333349 0.08151749842495914 SFS(ph)LEGLTGGAGVGNK ddPTM_A549_PD325901_60min_R1 1 SFSLEGLTGGAGVGNK 16 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.101)FS(0.895)LEGLT(0.004)GGAGVGNK 65.374 0.0028217 1012300.0 1443.1 1684.6 1610.7 1588.4 1770.3 1925.4 1581.3 1967.1 1679.9 1730.2 1973.0 True False 1589.60244964593 1826.5671541042148 1720.0117879259333 1686.511860481863 1645.9602352034537 1909.720180764335 1641.4772368205622 1927.8646473399035 1609.2996450096125 1620.95487672222 1730.3335078774774 0.9186682465600658 1.0556156635634844 0.9940348378479907 0.9746744502166127 0.9512387223099433 1.1036717326863208 0.9486478932226706 1.1141578421519034 0.930051714125139 0.9367875437554074 1.0 10.756834417199833 SFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_A549_MK2206_60min_R1 4 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 32 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.099)FS(0.812)LEGLT(0.078)GGAGVGNKPS(0.002)S(0.002)S(0.007)LEVS(0.001)SANAEELR;S(0.216)FS(0.776)LEGLT(0.008)GGAGVGNKPSSSLEVSSANAEELR;S(0.14)FS(0.86)LEGLTGGAGVGNKPSSSLEVSSANAEELR;S(0.14)FS(0.86)LEGLTGGAGVGNKPSSSLEVSSANAEELR 137.44 9.629e-31 26569600.0 2941.89 3644.5999999999995 3245.85 3100.4 3928.99 3863.36 3652.67 4051.35 4692.799999999999 5257.3 4915.4 True False 3438.4091096950465 3830.0945726547598 3706.1603374806627 3859.9981391822453 3351.0407757015814 4272.178190909182 4316.312858073694 4625.641269239022 3629.888292861703 4069.672278646578 3694.7705218613983 0.930615065090105 1.0366258337270662 1.0030826855286066 1.0447193178421286 0.9069685805583811 1.156277004385347 1.1682221757845916 1.2519427774660976 0.982439442824447 1.101468211507844 1.0 11.851269047611742 -5.258852069044268 22.454593584736713 1.0299787145594583 0.9306149352057598 0.036109315847996815 0.09941482066393934 131.87608773168617 1144197.2276276571 0.014221811432068096 0.13185442621212703 5.5099534647048216e-06 5.258852069044268 -0.09936377935369856 SFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_A549_PD325901_60min_R1 2 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 32 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.127)FS(0.873)LEGLTGGAGVGNKPSSSLEVSSANAEELR;S(0.028)FS(0.972)LEGLTGGAGVGNKPSSSLEVSSANAEELR 123.9 4.3013e-22 100275000.0 2392.5 2338.8 2952.3999999999996 2382.2 2370.9 3184.8 2715.6 2446.1 2799.5 2770.1000000000004 2405.1000000000004 True False 2635.3848387345906 2535.8988840193133 3152.7676182234572 2529.343083631261 2204.3761631609714 3158.8640447170746 2818.9436440333398 2397.310616571673 2681.8467505234894 2595.195413251778 2109.287947185059 1.24941919013553 1.2022535317681904 1.494707075167698 1.199145468501247 1.0450807184020618 1.497597352193058 1.3364432522336975 1.1365497156379212 1.271446487001709 1.2303656391320041 1.0 11.042540341206363 -10.770552623026605 0.5237940826246635 0.9415332086343213 1.2807881634157616 0.06424150224599046 0.14613740499319428 1.2463661252529499 0.4494811476021453 0.21377687240041968 0.029908738445543728 1.6960840770029152e-11 10.770552623026605 0.3392549547814403 SFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELRHPFSGEER ddPTM_A549_MK2206_60min_R1 1 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELRHPFSGEER 40 2 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.146)FS(0.854)LEGLTGGAGVGNKPSSSLEVSSANAEELRHPFSGEER 201.88 1.6286e-98 10950000.0 725.59 934.42 826.93 662.55 1127.5 728.92 931.0 1236.0 1123.7 1173.0 1713.8 True False 848.0518530276894 981.9779867694839 944.2011084532205 824.874779743 961.6462435902188 806.0538305820643 1100.1506489408048 1411.2067850912485 869.1837441801681 908.0184853161196 1288.2161615262362 0.6583148685411192 0.7622773383048297 0.7329523853625327 0.6403232659072647 0.7464944722094559 0.6257131797097454 0.8540109042238552 1.0954735914967075 0.674718863292623 0.7048650004827832 1.0 10.331158981372349 -7.818370975679089 9.080256668377093 0.8658427649673164 0.6991961909339349 0.34623602255005326 0.11723374583506696 0.34130627036010064 50.9735905320654 0.021320425355517064 0.029511653889270198 1.5192492279523714e-08 7.818370975679089 -0.16664657403338146 SFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELRHPFSGEER ddPTM_A549_PD325901_60min_R1 1 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELRHPFSGEER 40 2 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.152)FS(0.848)LEGLTGGAGVGNKPSSSLEVSSANAEELRHPFSGEER 190.16 8.618199999999999e-82 8430700.0 1182.8 830.72 1073.9 1210.9 1273.2 933.39 1317.5 1449.7 1296.6 917.19 1388.9 True False 1302.8769852686605 900.7276898120934 1146.7813118853046 1285.694542846568 1183.774824301551 925.7887813044681 1367.6381834636638 1420.7845962323513 1242.1084110479576 859.2784668713755 1218.074104962508 1.06962046066053 0.7394687122421156 0.9414708901644389 1.0555142233207078 0.9718413842628952 0.7600430692457448 1.122787339367796 1.1664188495954297 1.0197313989251822 0.7054402218802803 1.0 10.250386190984935 -7.789735791173508 24.999995137437967 1.03157276330179 0.9237348510012825 0.05327557228167368 0.14648282655586692 272.6675734854341 240901.91643353066 0.01685721992577667 0.02329394550686878 1.622797047291978e-08 7.789735791173508 -0.10783791230050743 SFS(ph)LSWR ddPTM_A549_MK2206_60min_R1 2 SFSLSWR 7 0 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7;A0A3B3IS41 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.002)FS(0.998)LSWR;S(0.003)FS(0.95)LS(0.046)WR 109.71 0.008599200000000001 3859700.0 1177.1599999999999 895.62 835.27 755.19 1757.86 1311.76 1067.0100000000002 1232.42 1699.21 1898.48 2132.3 True False 1375.8358292011662 941.2032324976835 953.7238458608597 940.211583901767 1499.2811226230615 1450.5695725241833 1260.8719053988489 1407.1193091279588 1314.3416480807896 1469.612049448376 1602.7910615138262 0.8583999887681542 0.5872276524980885 0.5950394089171382 0.586608951396162 0.9354189442552792 0.9050272411390473 0.786672658511062 0.8779181160387451 0.8200330533659216 0.9169080641492575 1.0 10.646370653907278 -6.756948403991576 0.0545070021347207 1.4957994524128928 0.0019777550448183416 0.3870114632859135 0.11209385598592825 61.579257750553346 0.874803068014732 9.362024219937892 14.806768351764475 1.7500545901099096e-07 6.756948403991576 -1.4938216973680745 SFS(ph)LSWR ddPTM_A549_PD325901_60min_R1 1 SFSLSWR 7 0 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7;A0A3B3IS41 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.152)FS(0.845)LS(0.002)WR 50.04 0.05315399999999999 2742500.0 504.81 453.11 418.03 525.75 412.42 296.78 299.49 377.72 610.92 466.67 599.46 True False 556.0579395785194 491.2951698896834 446.4000296185994 558.2243834351171 383.4530419717608 294.3631220770953 310.88725583721623 370.1860782843923 585.2451569315276 437.2043765575998 525.7302202900319 1.0576868479650199 0.9345005307449293 0.8491047544733722 1.0618076760494366 0.729372265798644 0.5599128806304928 0.5913437041258685 0.7041369584578382 1.113204328654843 0.8316135532714961 1.0 9.038178856793053 -8.767465400179299 24.998816633235347 1.0534576097887112 0.8063212856509675 0.12812314906091726 0.17206124511490287 133.27760906503076 552897.7804168204 0.03023931415928454 0.0325959284293039 1.7081838039878578e-09 8.767465400179299 -0.24713632413774367 SFS(ph)MQDLR ddPTM_A549_MK2206_60min_R1 5 SFSMQDLR 8 0 Q9H6H4;E5RGS2 Q9H6H4 REEP4 Receptor expression-enhancing protein 4;Receptor expression-enhancing protein 1 S(0.019)FS(0.981)MQDLR;S(0.085)FS(0.915)MQDLR;S(0.067)FS(0.933)MQDLR;S(0.001)FS(0.999)MQDLR;S(0.018)FS(0.982)MQDLR 136.52 0.0010856 152159100.0 19396.33 19274.3 18502.27 16551.64 27044.3 21121.600000000002 18297.77 21602.49 28447.6 27687.0 28602.800000000003 True False 22669.956309260808 20255.279542808436 21126.170102548895 20606.792543031363 23066.119295367564 23356.673692616634 21622.237958828773 24664.709112351014 22004.264021482395 21432.487470543383 21499.935362879365 1.054419742507763 0.942108857581968 0.9826155170226328 0.9584583486055472 1.0728459833043167 1.0863601819446869 1.0056885099366657 1.1471992215816509 1.0234572174330243 0.9968628792971892 1.0 14.39204470207146 -6.7471063241775235 24.99970168032115 1.0307261471423255 0.9812522703901102 0.22115210882802583 0.0510016539573829 341.2370859887783 595181.8242436897 0.00742048158806262 0.015390668956764938 1.7901675307327928e-07 6.7471063241775235 -0.04947387675221526 SFS(ph)MQDLR ddPTM_A549_PD325901_60min_R1 5 SFSMQDLR 8 0 Q9H6H4;E5RGS2 Q9H6H4 REEP4 Receptor expression-enhancing protein 4;Receptor expression-enhancing protein 1 S(0.031)FS(0.969)MQDLR;S(0.075)FS(0.925)MQDLR;S(0.004)FS(0.996)MQDLR;S(0.026)FS(0.974)MQDLR;S(0.001)FS(0.999)MQDLR 148.32 0.00073421 163336000.0 17308.3 17535.09 17631.0 16566.0 19488.5 17955.0 18220.6 17859.199999999997 19772.399999999998 20031.4 20530.899999999998 True False 19065.425874302982 19012.83357370371 18827.545683815817 17589.244195884272 18119.69499167514 17808.78043296128 18913.994903694882 17502.984245728632 18941.43478837316 18766.6139854199 18005.729456098168 1.0588532900479584 1.0559324252905764 1.0456419291271377 0.9768692925643819 1.0063294039741542 0.9890618692446151 1.0504431353259671 0.9720785980042999 1.051967088284673 1.0422579119150341 1.0 14.136168427362996 -6.019384436517435 23.6957838463979 1.0165548039740029 1.0557414587755807 0.3266093970993621 0.026561032832484045 373.65520934001705 456763.9948508344 0.0038894702664926486 0.010487985212449664 9.563471401203729e-07 6.019384436517435 0.03918665480157779 SFS(ph)PLQPGQAPTGR ddPTM_A549_MK2206_60min_R1 1 SFSPLQPGQAPTGR 14 0 Q7Z3C6;H7C152;Q7Z3C6-2;H7C1G6 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 S(0.421)FS(0.579)PLQPGQAPTGR 126.16 3.3610999999999996e-07 11139000.0 3584.1 4485.0 4625.7 3883.5 6071.6 4960.4 3621.9 4028.1 5991.0 5962.7 6172.6 True False 4189.008457168014 4713.267343016135 5281.693816129613 4834.957674336941 5178.475682999882 5485.306235552966 4279.952347367025 4599.095510538883 4634.048065661107 4615.721928725 4639.773064906553 0.9028477036629338 1.015840058787673 1.1383517560542562 1.0420677060493946 1.116105380706627 1.1822358893027978 0.9224486386497924 0.9912328569094597 0.9987661036077933 0.9948163119520937 1.0 12.179838528346735 -7.784028346578633 24.999843648097155 0.9934106337770625 1.0683960060047124 0.251620410291406 0.07141780367341999 284.70800710315694 315093.1903920555 0.011061780621044496 0.015289633387823921 1.6442643979019784e-08 7.784028346578633 0.0749853722276499 SFS(ph)PLQPGQAPTGR ddPTM_A549_PD325901_60min_R1 2 SFSPLQPGQAPTGR 14 0 Q7Z3C6;H7C152;Q7Z3C6-2;H7C1G6 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 S(0.059)FS(0.941)PLQPGQAPTGR;S(0.019)FS(0.981)PLQPGQAPTGR 196.48 3.1541e-31 35303000.0 9861.2 11884.400000000001 9710.5 10892.7 14099.3 12274.8 11993.7 12343.3 10954.8 11747.8 11953.099999999999 True False 10862.301764568248 12885.940096305423 10369.512923980114 11565.517339883403 13109.013807944437 12174.838098496964 12450.126816704467 12097.10319836848 10494.407852343182 11006.041903107904 10482.944476943881 1.0361880470185378 1.2292290705771336 0.9891794187011819 1.1032699224269027 1.2505087513127933 1.1613948853086289 1.1876555145443337 1.153979516439753 1.001093526291636 1.0498998566017896 1.0 13.355756381313828 -8.764590108281645 24.85256829439574 1.0005163756808073 1.1418484374978481 0.3428800124044964 0.0741433097335534 49.1838632559663 387954.6644003731 0.012062357011162983 0.013108415905666415 1.7195305326138232e-09 8.764590108281645 0.14133206181704083 SFS(ph)PTMK ddPTM_A549_MK2206_60min_R1 2 SFSPTMK 7 0 A3KN83-4;A3KN83-3;A3KN83-2;A3KN83 A3KN83-4 SBNO1 Protein strawberry notch homolog 1 1 S(0.004)FS(0.857)PT(0.139)MK;S(0.001)FS(0.5)PT(0.5)MK 49.96 0.018933000000000002 53464000.0 5251.700000000001 6013.9 5072.5 5391.0 7195.1 5381.1 5471.9 5771.3 8566.3 6803.2 8304.6 True False 6138.058568262397 6319.9818225562385 5791.856774610859 6711.795242011185 6136.710321291335 5950.524430314908 6466.073400579145 6589.399448864985 6626.046727570153 5266.352394972396 6242.338624699959 0.9832947132946389 1.0124381586011784 0.9278344419979696 1.0752052468691236 0.9830787290214169 0.9532524247834958 1.035841499369147 1.0555978848683025 1.06146864595777 0.8436505469495458 1.0 12.60787090512404 -7.80316390910186 24.960889440829245 1.0326443752171799 0.9910848600641065 0.0 0.06825163708434771 174.35851674127676 104305.94529786333 0.006195744156223333 0.008560692456923868 1.5733889323535525e-08 7.80316390910186 -0.041559515153073434 SFS(ph)PTMK ddPTM_A549_PD325901_60min_R1 3 SFSPTMK 7 0 A3KN83-4;A3KN83-3;A3KN83-2;A3KN83 A3KN83-4 SBNO1 Protein strawberry notch homolog 1 1 S(0.001)FS(0.499)PT(0.499)MK;S(0.003)FS(0.625)PT(0.372)MK;S(0.003)FS(0.71)PT(0.288)MK 54.722 0.014825 77267000.0 15222.0 16795.300000000003 16422.199999999997 18756.1 20356.2 16866.1 16728.4 17441.9 18170.4 18753.199999999997 20688.4 True False 16767.32623415586 18210.698874110476 17536.70924671091 19914.62169880628 18926.450737077634 16728.74807353764 17365.00841613172 17094.007621594163 17406.7612772681 17569.119751558854 18143.857954572934 0.924132357965791 1.0036839419546213 0.9665369565071469 1.0975957675962211 1.0431326559359144 0.9220061199454754 0.9570736532224166 0.9421374254798898 0.9593748650838032 0.9683232637483681 1.0 14.147193630352536 -7.245821390572995 24.818490767295224 0.9714918782451311 1.0096145348382826 0.19350211194727385 0.04527712753191287 1253.10074347733 1991298.9275681379 0.006974936847414907 0.012051316661185791 5.677780637380838e-08 7.245821390572995 0.038122656593151505 SFS(ph)PVLGPRPR ddPTM_A549_MK2206_60min_R1 2 SFSPVLGPRPR 11 1 Q9ULC8-2;Q9ULC8;Q9ULC8-3 Q9ULC8-2 ZDHHC8 Probable palmitoyltransferase ZDHHC8 1 S(0.038)FS(0.962)PVLGPRPR;S(0.137)FS(0.863)PVLGPRPR 70.089 0.00089879 11530500.0 2192.41 2382.2 1803.42 2614.7 3120.3999999999996 2480.8 2775.0 2277.5 3416.5 3721.6000000000004 3696.0 True False 2562.4352087217794 2503.44380480112 2059.172073823306 3255.301617378344 2661.393293568886 2743.316609378236 3279.181579818186 2600.342599551228 2642.668205029407 2880.8879752365474 2778.181195589317 0.9223427229260426 0.9011089013112701 0.741194302622334 1.171738410203953 0.9579624604018465 0.9874505715226809 1.1803339483487487 0.9359874020022781 0.9512224073883112 1.0369690716394917 1.0 11.439924980976803 -6.246666576305238 24.97252219397107 0.9979313628370171 0.8595046872683303 0.3856556001264464 0.0916569002800388 720.8510930166025 1218552.9080249048 0.012170935298248193 0.03204888544433932 5.666741784869737e-07 6.246666576305238 -0.13842667556868682 SFS(ph)PVLGPRPR ddPTM_A549_PD325901_60min_R1 2 SFSPVLGPRPR 11 1 Q9ULC8-2;Q9ULC8;Q9ULC8-3 Q9ULC8-2 ZDHHC8 Probable palmitoyltransferase ZDHHC8 1 S(0.016)FS(0.984)PVLGPRPR;S(0.03)FS(0.97)PVLGPRPR 89.189 8.437700000000001e-05 18725700.0 1763.0700000000002 2218.19 1807.98 1695.17 2112.85 2435.7 2181.7 1950.81 2444.2 2237.75 2426.6 True False 1942.0555684964645 2405.1246560384816 1930.680395066945 1799.8768008896 1964.4507049367999 2415.8644667537615 2264.7257873720478 1911.8995641691597 2341.478773934458 2096.458083103197 2128.143583484787 0.9125585245128961 1.1301514966862076 0.9072134089305663 0.8457497016918109 0.9230818447503698 1.1351980597088462 1.0641790361078975 0.898388425953134 1.1002447354141112 0.9851112017875666 1.0 11.055379775817592 -7.230139250306262 24.829223599175478 1.0429222864865542 0.9466321870314044 0.18633211875292632 0.08813889228106715 769.0265958940287 610040.3254098415 0.013134813322798389 0.022748586262266567 5.8865488133555736e-08 7.230139250306262 -0.09629009945514977 SFS(ph)SPENFQR ddPTM_A549_MK2206_60min_R1 3 SFSSPENFQR 10 0 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 RBM7 RNA-binding protein 7 1 S(0.001)FS(0.906)S(0.093)PENFQR;S(0.028)FS(0.854)S(0.118)PENFQR;S(0.021)FS(0.958)S(0.021)PENFQR 192.44 9.3348e-15 29130500.0 10023.4 14258.6 9173.300000000001 8875.2 11735.0 10122.4 9293.5 9054.2 18259.300000000003 13444.800000000001 19126.800000000003 True False 11715.104871398087 14984.301836595287 10474.21187787833 11049.624398422871 10008.7970452605 11193.54564929469 10982.0086529875 10337.66057732458 14123.597704110489 10407.610342180868 14377.087687174713 0.8148454767962996 1.0422348505227694 0.7285350208458421 0.768557905387184 0.6961630382340223 0.7785683646681834 0.7638548843785768 0.7190371793131954 0.9823684748552829 0.7239025433130748 1.0 13.811483843588766 -8.776773121903906 24.071678072040392 0.9916740561581159 0.7904434866644713 0.024075537468115193 0.11870480019127064 88.1126003190866 138322.95271069667 0.015485245354137938 0.016518794420136176 1.6719638303448704e-09 8.776773121903906 -0.2012305694936446 SFS(ph)SPENFQR ddPTM_A549_PD325901_60min_R1 3 SFSSPENFQR 10 0 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 RBM7 RNA-binding protein 7 1 S(0.005)FS(0.498)S(0.498)PENFQR;S(0.034)FS(0.485)S(0.48)PENFQR;S(0.346)FS(0.549)S(0.106)PENFQR 203.02 1.2645e-19 42758400.0 12546.1 14735.599999999999 12772.099999999999 13658.8 15401.800000000001 13106.7 13390.3 13793.599999999999 14315.999999999998 14109.0 16684.8 True False 13819.770836049334 15977.420726592703 13638.89151087651 14502.473054614504 14320.03070132551 12999.963380712534 13899.875193953305 13518.475827130129 13714.348305231035 13218.155332142996 14632.675373661505 0.9444459391837954 1.091900169900011 0.9320846094505874 0.9911019471339217 0.978633799742544 0.8884201315715774 0.9499202872341975 0.9238553772239825 0.9372413420663019 0.9033314137437496 1.0 13.83690594912447 -5.798457294178248 24.999821203356184 0.9599054028627831 1.018173742520565 0.2142073076644826 0.04748270798827183 170.64805046258226 115245.93860415564 0.006161385617763232 0.019157241044198327 1.5905330792763613e-06 5.798457294178248 0.05826833965778189 SFS(ph)SQRPGMER ddPTM_A549_MK2206_60min_R1 1 SFSSQRPGMER 11 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.087)FS(0.787)S(0.127)QRPGMER 40.53 0.027611 19624000.0 4040.4 4093.4 4524.4 3559.5 5541.0 4219.3 3477.4 4492.8 6844.3 6616.8 6465.8 True False 4722.320741704095 4301.73657567497 5166.027952892925 4431.577659792026 4725.926240118318 4665.783525455331 4109.198567805318 5129.668158622949 5294.076978101206 5122.060284432817 4860.163412998213 0.9716382640704083 0.8851012219404466 1.0629329744503437 0.9118165961128054 0.9723801112281768 0.9600054831442447 0.8454856799290976 1.0554517868481461 1.0892796246197232 1.053886433269749 1.0 12.246789106962012 -8.318398949892414 24.999782002431054 1.0443347439119055 0.9469351097168047 0.4497513495995159 0.05594901240964013 212.32798231869222 93191.1228841436 0.009447290066317495 0.011421217973300497 4.80397844512045e-09 8.318398949892414 -0.09739963419510078 SFS(ph)SQRPGMER ddPTM_A549_PD325901_60min_R1 2 SFSSQRPGMER 11 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.19)FS(0.72)S(0.09)QRPGMER;S(0.017)FS(0.902)S(0.08)QRPGMER 66.78399999999999 0.0013852 33527000.0 11098.6 11433.900000000001 11224.400000000001 11874.9 12669.0 12859.2 10890.7 11556.599999999999 13775.1 13868.4 14616.3 True False 12225.321701642519 12397.474880275544 11986.155281800366 12608.385603145365 11779.173145677314 12754.478938654174 11305.15154811971 11326.09454702268 13196.18045120062 12992.74685720405 12818.587760359635 0.9537182980053591 0.9671482625109182 0.9350605157041173 0.9836017694660326 0.918913484534028 0.9949987609474648 0.8819342473185623 0.8835680465556152 1.029456652940245 1.0135864496230222 1.0 13.645949706767045 -8.78448743999695 24.999937401262265 1.0139100948390891 0.9412828954985869 0.47558134585462386 0.03480806430053849 145.76318800660297 158106.7674369666 0.0061105867428285715 0.006507188546006276 1.642527161654763e-09 8.78448743999695 -0.07262719934050221 SFS(ph)SQRPVDR ddPTM_A549_MK2206_60min_R1 2 SFSSQRPVDR 10 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.186)FS(0.804)S(0.011)QRPVDR;SFS(0.617)S(0.383)QRPVDR 99.506 0.00015223 834360000.0 16854.0 17720.6 17033.9 15696.3 23992.0 16930.0 15514.6 17807.800000000003 23541.0 26673.0 25749.0 True False 19698.54315926167 18622.50284919769 19449.56315683469 19541.894204633692 20462.80858201022 18721.521362775526 18333.401995764776 20332.110184100264 18209.00108725225 20647.550774796975 19354.812663752527 1.0177594328336164 0.9621639419984519 1.0048954487304138 1.0096658926196445 1.057246532813657 0.9672799054178901 0.9472270444704103 1.050493773167746 0.9407996555478866 1.0667915589524395 1.0 14.240404723326241 -8.790975497030637 24.999960095364564 0.9720442950284787 0.9999558860683809 0.0 0.045008111791829127 355.52735617022375 300923.7247850875 0.006490101967448631 0.0069096782770473 1.6181713325724971e-09 8.790975497030637 0.02791159103990226 SFS(ph)SQRPVDR ddPTM_A549_PD325901_60min_R1 3 SFSSQRPVDR 10 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.163)FS(0.83)S(0.007)QRPVDR;SFS(0.994)S(0.006)QRPVDR;S(0.184)FS(0.797)S(0.02)QRPVDR 103.4 0.00012375 1551880000.0 31967.100000000002 31750.0 33872.600000000006 34061.7 36915.8 36024.2 36441.6 37309.2 36724.5 34550.0 38306.0 True False 35212.3764590648 34425.68392663468 36171.39832849072 36165.61384926661 34322.9615605963 35730.83085898544 37828.405029608664 36565.03873749881 35181.096977888876 32368.50710366013 33594.60484174082 1.0481556971705743 1.0247384688347714 1.076702598494276 1.0765304137267704 1.0216807645836783 1.0635883656708591 1.1260261940217082 1.0884199683178675 1.047224610726091 0.9635031355821373 1.0 15.035941940141678 -9.886703247378668 0.9828799310029146 1.0065268404436924 1.0643349411266947 0.47695804704354816 0.03104868829079011 0.36402826218295975 0.7184758140657066 0.010436965454559305 0.005910558124597142 1.298065934088983e-10 9.886703247378668 0.05780810068300224 SFS(ph)SQRPVVDR ddPTM_A549_PD325901_60min_R1 1 SFSSQRPVVDR 11 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(0.405)FS(0.567)S(0.028)QRPVVDR 76.311 0.00034626 13223000.0 2591.2 2638.2 3134.9 2575.7 3471.8 2617.1 2760.6 2883.5 2907.0 3388.5 3430.4 True False 2854.25671645938 2860.5303727637056 3347.6531656851125 2734.795139160878 3227.952745059791 2595.787205296739 2865.656143658284 2825.9863304380096 2784.8288993648093 3174.5495317149716 3008.482547097263 0.9487363385947885 0.95082166108083 1.1127381041033788 0.9090280885290651 1.0729504640717575 0.8628227568749857 0.9525254339345312 0.9393394464477334 0.9256589844776577 1.0551995838493193 1.0 11.554820272046685 -7.247564720204862 24.962383120311557 0.9545372786118805 0.9975228680989225 0.08624748514855263 0.06943710176547015 1472.2336956878419 2648747.2280034027 0.009019884608089529 0.015574838008640261 5.65503477344275e-08 7.247564720204862 0.04298558948704201 SFS(ph)SSAEEHS ddPTM_A549_PD325901_60min_R1 1 SFSSSAEEHS 10 0 Q96EQ0 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta 1 S(0.01)FS(0.848)S(0.124)S(0.018)AEEHS 142.36 4.8569e-08 8038800.0 682.93 1034.0 761.54 1090.6 831.48 1313.7 707.95 874.36 1470.0 1267.8 1412.8 True False 752.2605508535063 1121.1388088233152 813.222683912035 1157.9638850676913 773.0797132502782 1303.0016627558475 734.891424655105 856.9202038778492 1408.2210120627012 1187.750891635899 1239.034556477091 0.6071344394077157 0.9048487009200251 0.6563357572723768 0.9345694831628382 0.6239371688295379 1.0516265716273743 0.5931161651734712 0.691603151339301 1.1365470032302027 0.9586099801873119 1.0 10.275000709237379 -8.761609056739674 24.999999386220335 1.06448053881353 0.7651315943599623 0.3973431899368831 0.14850793239771856 2.6816119759443695 395083.8359804954 0.023163068889812292 0.02542950392977297 1.7313742065852776e-09 8.761609056739674 -0.29934894445356786 SFS(ph)TTSASSQK ddPTM_A549_PD325901_60min_R1 1 SFSTTSASSQK 11 0 B5MCH3;Q8N3C7-3;Q8N3C7-2;Q8N3C7 B5MCH3 CLIP4 CAP-Gly domain-containing linker protein 4 1 SFS(0.87)T(0.126)T(0.004)SASSQK 101.39 0.00024977 6635000.0 4210.5 5275.9 5064.6 5744.9 6155.6 5483.3 5150.5 4990.2 5127.7 5737.6 7397.7 True False 4637.946860393728 5720.518608772658 5408.314211913877 6099.749425385454 5723.251891667163 5438.645822782321 5346.5050959617465 4890.66654626383 4912.200601057084 5375.326956815056 6487.829797884044 0.7148687627265374 0.8817306845254111 0.8336091390186836 0.9401833302369986 0.8821519783909495 0.838284294165068 0.8240822066117499 0.7538216473956952 0.7571407934682813 0.82852465682256 1.0 12.663520256965501 -10.923780395109956 1.1981720243851548 0.9993352506498762 0.8241793260221617 0.016454201304865523 0.0788389084146958 0.3211562817243262 0.8242040312688672 0.045749452543279986 0.010974162068351358 1.191844522526365e-11 10.923780395109956 -0.17515592462771445 SFSEDAVTDSSGSGT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 SFSEDAVTDSSGSGT(1)LPR;SFSEDAVTDSSGS(0.001)GT(0.999)LPR 478.26 0.0 67418000.0 12242.0 11798.5 11831.5 12342.400000000001 16021.1 12837.300000000001 13333.4 12657.5 18666.7 17577.1 17201.7 True False 14308.150311835847 12398.993254531953 13509.384608932158 15366.288554071396 13664.417413022831 14195.734565289918 15755.906189674892 14451.739386968027 14438.722254594608 13606.42090217388 12930.043147231803 1.1065817916391936 0.9589289929930711 1.044805841334287 1.188417422826711 1.0567959640527766 1.0978876407175089 1.2185501633881306 1.117686864800757 1.1166801293842394 1.0523105566810798 1.0 13.658439468943053 -4.902037453338085 19.93949989765049 1.0748350885661464 3.9579635714630013 0.0 0.07289014488322018 2490.1793307942353 514540.77031080413 0.010756986322909943 4941.755400387108 1.2530331093354473e-05 4.902037453338085 2.883128482896855 SFSEDAVTDSSGSGT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 SFSEDAVTDSSGSGTLPR 18 0 Q27J81-2;Q27J81;A0A0A0MQU1 Q27J81-2;Q27J81 INF2 Inverted formin-2 1 SFSEDAVTDSSGS(0.002)GT(0.998)LPR;SFSEDAVTDSSGS(0.004)GT(0.996)LPR 391.86 2.8244999999999983e-303 94761000.0 10890.599999999999 10728.900000000001 12060.8 11172.2 12440.8 10344.1 11243.2 12595.2 11351.2 11888.900000000001 12165.4 True False 11996.205694764014 11633.062056077828 12879.318415482152 11862.281420092853 11567.001126430056 10259.861079175425 11671.066128515113 12343.978855256752 10874.148538861311 11138.232825027635 10669.132922824467 1.1243843132838416 1.0903474668678304 1.20715699285454 1.1118318148156057 1.0841556863243105 0.9616396340162295 1.093909525069953 1.1569805104639093 1.019215771095911 1.0439679499352401 1.0 13.381155313090316 -7.619584484973974 0.2652634444511442 0.9857492594628718 1.1681150554964226 0.2552886214207446 0.05863404222495688 1.938894840728144 0.3136214988702405 0.05079571801149711 0.12030446412862335 2.4011291215769605e-08 7.619584484973974 0.18236579603355074 SFSKEELMS(ph)SDLEETAGSTSIPK ddPTM_A549_MK2206_60min_R1 4 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 S(0.004)FS(0.018)KEELMS(0.489)S(0.489)DLEETAGSTSIPK;S(0.016)FS(0.015)KEELMS(0.484)S(0.484)DLEET(0.001)AGSTSIPK;S(0.001)FSKEELMS(0.499)S(0.499)DLEETAGSTSIPK;S(0.016)FS(0.016)KEELMS(0.712)S(0.101)DLEET(0.113)AGS(0.019)T(0.019)S(0.003)IPK 108.88 4.1828e-11 48628400.0 3290.75 4842.56 3689.1099999999997 4467.82 5440.96 4210.719999999999 3844.12 4511.9 6168.4 5801.1 5686.26 True False 3846.1481488869313 5089.025619753888 4212.2812707313315 5562.436100568061 4640.601991596129 4656.295595550277 4542.546844904749 5151.475642114241 4771.267248910698 4490.627480961071 4274.204709207715 0.8998511794723726 1.19063684731591 0.9855122899605195 1.3013967460625298 1.085722913925742 1.0893946154519558 1.062781769698339 1.2052477577914469 1.1162935735464858 1.0506346294755438 1.0 12.061440290901816 -10.592639757447834 0.9464799659778459 1.001831955486461 1.1090020656731232 0.07120278784319567 0.10325678407024819 0.8236555888056172 1.3508190739471932 0.057213241886944884 0.016868475995978977 2.5548196190839276e-11 10.592639757447834 0.10717011018666223 SFSKEELMS(ph)SDLEETAGSTSIPK ddPTM_A549_PD325901_60min_R1 6 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 SFSKEELMS(0.823)S(0.177)DLEETAGSTSIPK;S(0.001)FS(0.001)KEELMS(0.496)S(0.496)DLEET(0.006)AGSTSIPK;S(0.001)FS(0.001)KEELMS(0.349)S(0.307)DLEET(0.326)AGS(0.007)T(0.007)S(0.001)IPK;S(0.002)FS(0.002)KEELMS(0.496)S(0.496)DLEET(0.003)AGSTSIPK;S(0.001)FS(0.001)KEELMS(0.494)S(0.494)DLEET(0.008)AGS(0.001)TSIPK;SFSKEELMS(0.559)S(0.44)DLEETAGSTSIPK 168.17 6.572199999999999e-41 51580100.0 11252.8 12281.5 11792.9 12780.7 14681.400000000001 12376.8 13472.300000000001 14139.699999999999 13050.5 12953.300000000001 14587.5 True False 12395.17597212647 13316.505106928002 12593.237110468574 13570.134811924296 13650.229112080426 12276.007444314955 13984.99574882543 13857.672591119932 12502.032869336239 12135.42642737599 12793.329977781395 0.9688780007749028 1.0408943668345318 0.9843595945965335 1.0607195183343199 1.0669801479198329 0.9595631055897963 1.0931474270665762 1.0831951192681668 0.9772305483442495 0.9485744875221691 1.0 13.643104211958347 -8.810576240442192 24.999961030254713 0.9892477399392222 1.0326294458621184 0.22852530584528774 0.04462359493295874 137.7044692339844 70060.85462794216 0.007233304484992394 0.007700445560037993 1.5467629457140067e-09 8.810576240442192 0.04338170592289614 SFSKEELMS(ph)SDLEETAGSTSIPKR ddPTM_A549_MK2206_60min_R1 1 SFSKEELMSSDLEETAGSTSIPKR 24 2 O00567 O00567 NOP56 Nucleolar protein 56 1 SFSKEELMS(0.5)S(0.5)DLEETAGSTSIPKR 98.81200000000001 8.1525e-09 6734900.0 1880.2 2201.9 2424.9 2214.1 2591.7 1902.6 1822.1 1635.6 3174.0 2813.5 3146.5 True False 2197.531793523422 2313.9673049246885 2768.7872829480293 2756.554599394724 2210.4643632042294 2103.931869156333 2153.1519843555743 1867.4513088149233 2455.0940678364823 2177.9283959393865 2365.1372110177986 0.9291350130920099 0.978364931279784 1.170666661557672 1.1654945795759921 0.9346030128429597 0.8895601740801076 0.9103708547332018 0.7895741947298254 1.038034519265786 0.920846530930081 1.0 11.207708167132797 -5.345021182541058 4.972895257104751 1.00129263341159 0.9298144960873628 0.0 0.11025967089971618 0.6006114188500974 23.77837640805225 0.015387778141483616 0.10127973291775987 4.518339058179649e-06 5.345021182541058 -0.07147813732422714 SFSKEELMS(ph)SDLEETAGSTSIPKR ddPTM_A549_PD325901_60min_R1 1 SFSKEELMSSDLEETAGSTSIPKR 24 2 O00567 O00567 NOP56 Nucleolar protein 56 1 S(0.004)FS(0.004)KEELMS(0.559)S(0.423)DLEET(0.006)AGS(0.001)T(0.002)S(0.002)IPKR 45.527 0.0094007 19483000.0 3670.8 3860.4 3158.2 4441.9 3961.8 4501.3 3959.4 5024.4 4737.2 4640.9 5207.2 True False 4043.456913699869 4185.729456074976 3372.5344437993945 4716.266074713163 3683.536835468021 4464.642905201258 4110.077133666814 4924.184400434448 4538.111958056753 4347.87278197905 4566.747411160466 0.8854128660188756 0.9165668864990567 0.7384981344835081 1.032740734288762 0.8065996438660025 0.9776417443825163 0.9000009774182789 1.0782694896591956 0.9937295736931426 0.9520720965108519 1.0 12.156951280477807 -7.7222938021288945 1.4779826072903035 1.0017865349358497 0.8794409201499822 0.30851227072247966 0.0788826742005048 0.3052963567802336 1.3572870656886908 0.011549197867097669 0.018560207390056482 1.8954232252292707e-08 7.7222938021288945 -0.12234561478586747 SFSKEELMSS(ph)DLEETAGSTSIPK ddPTM_A549_MK2206_60min_R1 8 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 SFSKEELMS(0.062)S(0.938)DLEETAGSTSIPK;SFSKEELMS(0.234)S(0.766)DLEETAGSTSIPK;S(0.035)FS(0.031)KEELMS(0.1)S(0.833)DLEET(0.001)AGSTSIPK;SFSKEELMS(0.214)S(0.786)DLEETAGSTSIPK;SFSKEELMS(0.206)S(0.794)DLEETAGSTSIPK;SFSKEELMS(0.097)S(0.903)DLEETAGSTSIPK;SFS(0.001)KEELMS(0.099)S(0.9)DLEETAGSTSIPK;SFSKEELMS(0.046)S(0.954)DLEETAGSTSIPK 284.13 4.279199999999998e-140 510927900.0 57302.99999999999 66508.90000000001 62141.6 57466.770000000004 79283.29999999999 61215.8 58555.59999999999 57262.0 90213.5 90272.59999999999 87169.4 True False 66974.34547615833 69893.91892751983 70954.21329623618 71546.13122978124 67620.83159595235 67693.61532424064 69194.39456403654 65379.063857520276 69780.28629135681 69879.95696295629 65522.832226948965 1.0221527855234005 1.0667108937756369 1.082892953260548 1.0919267192536732 1.032019363292121 1.0331301780388982 1.056034853993651 0.9978058279146005 1.0649766488979209 1.0664978082894176 1.0 15.999710098424938 -14.999999999989198 0.25911479835312196 0.6526098599674156 1.057483566081577 0.0 0.03270026196180732 37.557287883772695 0.48748635263288226 6.74056603160178 0.012761046159415363 1.0000000000248727e-15 14.999999999989198 0.4048737061141613 SFSKEELMSS(ph)DLEETAGSTSIPK ddPTM_A549_PD325901_60min_R1 7 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 SFSKEELMS(0.163)S(0.837)DLEETAGSTSIPK;SFSKEELMS(0.211)S(0.789)DLEETAGSTSIPK;SFSKEELMS(0.161)S(0.839)DLEETAGSTSIPK;SFSKEELMS(0.116)S(0.884)DLEETAGSTSIPK;SFSKEELMS(0.097)S(0.903)DLEETAGSTSIPK;SFSKEELMS(0.099)S(0.901)DLEETAGSTSIPK;SFSKEELMS(0.074)S(0.926)DLEETAGSTSIPK 313.05 2.069199999999999e-176 1578998000.0 127587.59999999999 121883.1 133323.4 127467.7 145999.60000000003 139280.5 138023.8 145973.1 137967.8 147173.59999999998 146053.90000000002 True False 140540.19922697326 132154.61658577676 142371.52766273287 135341.0903288491 135745.09176727675 138146.24578630272 143276.3712385213 143061.55200681835 132169.4931619486 137881.03377919638 128090.1962119547 1.0971971578091517 1.0317309247235171 1.1114943365934613 1.056607721209952 1.0597617599293492 1.0785075663223123 1.1185584492464793 1.116881355775973 1.0318470661348957 1.076437056517897 1.0 16.96680053311673 -8.941893015867874 4.812274402594494 1.0135279923669953 1.0822708252060649 0.24216149976361934 0.03239019043223821 0.10805877536921306 4.795071576710521 0.004888063849057976 0.005103080166157997 1.1431599061960088e-09 8.941893015867874 0.06874283283906957 SFSKEELMSS(ph)DLEETAGSTSIPKR ddPTM_A549_PD325901_60min_R1 2 SFSKEELMSSDLEETAGSTSIPKR 24 2 O00567 O00567 NOP56 Nucleolar protein 56 1 SFSKEELMS(0.182)S(0.817)DLEETAGSTSIPKR;SFSKEELMS(0.2)S(0.799)DLEETAGSTSIPKR 84.035 1.6158e-06 22014500.0 3597.1 3643.4 4226.8 4017.6 5324.1 5389.299999999999 4294.7 5320.6 5339.200000000001 4848.6 5413.5 True False 3962.274943954938 3950.4421045134145 4513.656065813207 4265.758027368382 4950.153583147887 5345.411327616722 4458.137158650017 5214.476459070043 5114.8119915681455 4542.458568532749 4747.673819003918 0.8345718545563942 0.8320795099066502 0.9507089656719911 0.8984943342766029 1.0426482045446102 1.1259011320912968 0.9390150479177934 1.098322390682699 1.077330117139609 0.9567756214317555 1.0 12.213005105094664 -6.309554847843917 1.1819556615596858 1.0418145052426993 0.8322001849583839 0.596654990768994 0.06109113766213781 0.24441577441712595 0.6070033697352121 0.00856137690436121 0.0390009076855435 4.90281100385534e-07 6.309554847843917 -0.20961432028431537 SFSKEELMSSDLEETAGSTSIPK ddPTM_A549_MK2206_60min_R1 2 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 0 ; 146.39 3.3448999999999996e-27 4394900.0 1869.3600000000001 2000.89 2226.33 2109.9 2820.1000000000004 2069.2799999999997 2077.36 1846.21 3289.5 3411.2 2733.9 False True 2184.86226653598 2102.7267545078153 2542.0570710733173 2626.8255947170096 2405.26702576388 2288.249836123105 2454.7894222166165 2107.915921280999 2544.433502252081 2640.607550818708 2054.9971781984927 1.0631947769637975 1.0232261030894283 1.237012438772205 1.2782623852650778 1.1704478484357095 1.113505098887334 1.1945463712843638 1.0257512485388898 1.238168854559037 1.2849689424554778 1.0 11.004920697546254 -11.017039029811901 1.2741887404882766 0.9991401359611876 1.1589621790177889 0.0 0.1177184886312508 0.4533238497115012 1.2989729216974557 0.06320492589704767 0.01396874384371265 9.615258626876534e-12 11.017039029811901 0.1598220430566013 SFSKEVEER ddPTM_A549_PD325901_60min_R1 1 SFSKEVEER 9 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 51.092 0.027055000000000003 4328400.0 3320.8 3471.2 3455.1 3231.3 3584.8 3482.0 3269.1 2731.1 3467.2 3685.0 4036.9 False True 3657.9251713562485 3763.7302061774612 3689.5838632041305 3430.890062185247 3333.0160148886275 3453.6437464534197 3393.5073894201623 2676.6260679934962 3321.4856415127847 3452.3284711139654 3540.3868920175305 1.033199275368387 1.0630844370889239 1.0421414313568365 0.9690720722983229 0.9414270577047781 0.9754989643194958 0.9585131492468985 0.7560264314695251 0.938170246026416 0.9751274582159059 1.0 11.789691310703637 -6.2996761089626645 3.3633383507392596 0.951461816912114 1.0497352775540094 0.3613965511545567 0.06215196276714451 0.2470408323552294 5.7267793605851365 0.0096231881379968 0.025371888008608796 5.015611518017172e-07 6.2996761089626645 0.09827346064189546 SFSLASSSNS(ph)PISQR ddPTM_A549_MK2206_60min_R1 2 SFSLASSSNSPISQR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 SFSLASSSNS(1)PISQR;SFSLASSSNS(1)PISQR 300.56 2.796699999999999e-124 72235000.0 7030.6 6387.4 6312.299999999999 6799.5 10562.3 8265.0 7113.799999999999 7854.8 12067.1 10780.900000000001 10971.900000000001 True False 8217.193398333042 6712.491377208749 7207.47905734374 8465.377805241158 9008.599661794206 9139.59681413702 8406.285377481303 8968.241954316132 9333.921117198992 8345.487202339775 8247.274420964943 0.9963526104387368 0.8139042106014194 0.8739225457348678 1.0264455107401043 1.092312344899539 1.108196035153596 1.0192804250713603 1.0874188849007447 1.1317582804655735 1.011908513814597 1.0 13.009701697469765 -6.356316260874272 3.9664545876748414 1.0671717804668512 0.8864545153344608 0.6345531782619971 0.05606477903314679 0.1136997234254248 3.2278693243852117 0.008734107157734974 0.02147986114682309 4.402341604973303e-07 6.356316260874272 -0.1807172651323904 SFSLASSSNS(ph)PISQR ddPTM_A549_PD325901_60min_R1 2 SFSLASSSNSPISQR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 SFSLASSS(0.006)NS(0.993)PISQR;SFSLASSS(0.07)NS(0.929)PISQR 343.24 5.918399999999998e-210 151842000.0 25189.0 25634.0 25395.0 26413.0 30177.0 27201.0 26674.0 27614.0 31637.0 28191.0 29034.0 True False 27746.168736838274 27794.267142530814 27118.457412540545 28044.471021724676 28057.47162499838 26979.48407446281 27689.093666572855 27063.217107236058 30307.406910631053 26411.015448893835 25463.002061690153 1.0896660444678365 1.09155499713634 1.0650141466760148 1.1013811707582752 1.1018917391210397 1.059556293052116 1.0874245542410699 1.0628447125625253 1.1902526982955184 1.0372310140378143 1.0 14.63611490107423 SFSPT(ph)MK ddPTM_A549_PD325901_60min_R1 1 SFSPTMK 7 0 A3KN83-4;A3KN83-3;A3KN83-2;A3KN83 A3KN83-4 SBNO1 Protein strawberry notch homolog 1 1 S(0.003)FS(0.364)PT(0.632)MK 40.946 0.05260499999999999 39433000.0 2937.2 3178.6 3144.6 2766.2 3889.1 3131.2 3648.3 3982.8 3797.4 3170.5 3412.0 True False 3235.382381747644 3446.47177729767 3358.011466015947 2937.0618915039854 3615.943032666637 3105.7005453460524 3787.1380529263624 3903.3599295538415 3637.808483814219 2970.3140889190868 2992.3456304500532 1.0812194783999727 1.1517625979520674 1.1222004008644206 0.9815249487280141 1.2083975179440731 1.0378816249508418 1.265608496020151 1.304448219428038 1.2157046454780984 0.9926373673860486 1.0 11.547061107794566 -5.231815688349873 20.346565883515936 1.1252846215808494 1.081218691873722 0.014616819886783872 0.10836897201243412 4136.850873185203 2840733.896279801 0.01584775305982783 1.4503478772179552 5.863869703913667e-06 5.231815688349873 -0.044065929707127305 SFSRS(ph)PSDAR ddPTM_A549_MK2206_60min_R1 3 SFSRSPSDAR 10 1 H7C0N4;H7C561 H7C0N4 SF1 1 S(0.105)FS(0.105)RS(0.745)PS(0.045)DAR;S(0.053)FS(0.053)RS(0.883)PS(0.011)DAR;S(0.016)FS(0.016)RS(0.95)PS(0.018)DAR 64.65 0.0016584 24924300.0 5080.9 6290.4 5554.5 4522.4 6584.599999999999 4983.6 5198.0 4688.5 6805.0 8904.3 8388.8 True False 5938.431703921477 6610.5544915292485 6342.211622390541 5630.388203018253 5616.014062566876 5510.961244154055 6142.409315998171 5353.109232929057 5263.678365352005 6892.812445695072 6305.629440898173 0.9417666800089679 1.0483575911792942 1.0058015114645174 0.8929145386342686 0.8906349659784214 0.8739748023266452 0.9741151733653488 0.848941296519727 0.8347585938386902 1.0931204426616703 1.0 12.622424675189738 -6.254697496126319 23.514263848626328 0.9116975578403869 1.0036135124563497 0.13516930471517363 0.0753879597728565 249.956227291544 871785.2953751432 0.00946584732666305 0.02439544268151699 5.562916022128361e-07 6.254697496126319 0.0919159546159628 SFSRS(ph)PSDAR ddPTM_A549_PD325901_60min_R1 2 SFSRSPSDAR 10 1 H7C0N4;H7C561 H7C0N4 SF1 1 S(0.018)FS(0.028)RS(0.872)PS(0.082)DAR;S(0.032)FS(0.042)RS(0.91)PS(0.016)DAR 82.069 0.00029928 62666000.0 5248.4 4879.200000000001 5154.2 5560.9 5585.6 5236.9 5479.5 5312.3 5740.1 5342.0 5487.799999999999 True False 5781.213704332131 5290.387307553889 5503.99500672245 5904.384163279778 5193.286725273913 5194.252422688661 5688.025370997449 5206.342009081269 5498.863558735451 5004.705208328579 4812.835390030419 1.2012074454712633 1.0992246521692177 1.1436075744713268 1.226799523522133 1.0790493138476298 1.079249964261884 1.1818449853448028 1.0817619110485228 1.1425413738699872 1.0398662748149687 1.0 12.232671365341153 -14.99999999769721 0.22861221758904227 0.2290904217059037 1.1538895234353097 0.46581537843769305 0.048661459866858554 24.190902935085095 0.30208527644969496 8.377008964185958 0.02837331372083713 1.0000000053023718e-15 14.99999999769721 0.9247991017294059 SFSS(ph)PENFQR ddPTM_A549_PD325901_60min_R1 1 SFSSPENFQR 10 0 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 RBM7 RNA-binding protein 7 1 S(0.002)FS(0.097)S(0.901)PENFQR 156.58 1.4583999999999998e-08 23923000.0 4289.7 4948.4 4720.9 4487.2 5166.4 4947.5 4192.3 4766.8 5891.7 4659.5 5983.3 True False 4725.187186089767 5365.419034411313 5041.28866307788 4764.364152829398 4803.529887112421 4907.209200338399 4351.840270614584 4671.722434517743 5644.092337938651 4365.298374804756 5247.392031263715 0.9004829747686707 1.0224925072196624 0.9607227043533473 0.9079489629216839 0.9154128104958076 0.9351710661413284 0.8293339328730396 0.8902941512057495 1.0755995176863888 0.8318986553313559 1.0 12.357384862032228 -8.758899440604093 24.999506039546308 1.0356997741025906 0.9218886397817201 0.0 0.07773267798164404 41.18922105983547 405407.1623529138 0.009189328592847325 0.01018480833207722 1.7422102294877979e-09 8.758899440604093 -0.11381113432087053 SFSS(ph)QRPVDR ddPTM_A549_MK2206_60min_R1 1 SFSSQRPVDR 10 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 SFS(0.096)S(0.904)QRPVDR 122.77 2.8162e-05 268060000.0 6007.1 5880.5 6268.3 5628.3 8855.5 6143.9 6263.9 5509.8 8780.3 9496.7 9394.7 True False 7020.951620505557 6179.792332353708 7157.239195720698 7007.233752663988 7552.867680809914 6794.043420009248 7401.969548765096 6290.831023054826 6791.576069257926 7351.388874255402 7061.736709470495 0.994224495950091 0.8751094223133509 1.0135239375495442 0.9922819330359041 1.069548185035101 0.9620924284670308 1.0481797684184848 0.8908334141965661 0.9617430313069791 1.04101712888792 1.0 12.785807317169642 -5.787156172402975 24.999999299088 0.9867281537779587 0.9346667987126848 0.1446850484873029 0.05396037549149849 274.9069648785236 267244.7948151793 0.006671233429927789 0.020751681274265937 1.6324648075846905e-06 5.787156172402975 -0.052061355065273984 SFSS(ph)SAEEHS ddPTM_A549_MK2206_60min_R1 2 SFSSSAEEHS 10 0 Q96EQ0 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta 1 S(0.002)FS(0.211)S(0.393)S(0.393)AEEHS;S(0.001)FS(0.297)S(0.592)S(0.11)AEEHS 183.67 5.2725e-14 21622500.0 2134.71 2625.3999999999996 2429.8 2239.2 2823.0 1599.68 1628.29 1797.19 3765.5 3103.3 3076.6000000000004 True False 2494.9968593513377 2759.0216460099336 2774.382176628776 2787.8041005215064 2407.7404396054862 1768.9570758183568 1924.1292160728474 2051.9471861635434 2912.620262267885 2402.2623746645477 2312.595310159657 1.0788730948256953 1.1930412700782724 1.1996833879409876 1.2054872239315586 1.0411421440784903 0.7649228847118226 0.8320215852811745 0.8872919430169912 1.2594595558817439 1.03877334876144 1.0 11.175297110036396 -6.767616989407201 24.68878663401585 1.0525123800881604 1.1731414005671517 0.20012772598808604 0.13998626163482972 247.91020334038976 990776.7268301867 0.02594859089250539 0.04993529284477508 1.707587671436136e-07 6.767616989407201 0.12062902047899127 SFSS(ph)SAEEHS ddPTM_A549_PD325901_60min_R1 1 SFSSSAEEHS 10 0 Q96EQ0 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta 1 S(0.001)FS(0.041)S(0.855)S(0.104)AEEHS 209.73 3.2293000000000004e-26 7571700.0 1033.6 912.22 784.59 1205.9 1402.7 1814.1 1046.5 1296.1 1590.6 1631.4 1817.6 True False 1138.530311103896 989.0959808363681 837.8369955229452 1280.3857042023917 1304.1791910522986 1799.3265710629375 1086.3251301667726 1270.248268729219 1523.7526134604973 1528.3931255835348 1594.0467227157135 0.7142389836379625 0.62049372000294 0.5256037878836801 0.8032297209087134 0.8181561885654273 1.1287790661477581 0.6814888890559269 0.7968701610986333 0.9559021023326977 0.958813254218592 1.0 10.638478201093594 -6.395442042323236 0.3232203386018379 0.9995930957015002 0.4725489441210414 0.4406762517956817 0.12817924101820913 2.203251158965646 0.2733245185526613 0.05228791924906164 0.41581671847357704 4.023073413298281e-07 6.395442042323236 -0.5270441515804588 SFT(ph)FGAYGGVDK ddPTM_A549_MK2206_60min_R1 2 SFTFGAYGGVDK 12 0 P47736-4 P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 S(0.011)FT(0.989)FGAYGGVDK;S(0.002)FT(0.998)FGAYGGVDK 133.16 5.6195e-08 25861000.0 5640.0 5893.1 6257.1 8204.2 12523.2 11067.2 11603.5 11319.0 18238.0 17667.6 16487.0 True False 6591.894115238859 6193.033618534755 7144.450867307567 10214.22936830053 10681.053869382727 12238.323758187207 13711.70575186318 12923.502912983688 14107.122120101365 13676.476889318892 12392.82288194834 0.5319122348501211 0.4997274372052606 0.5764990700959934 0.8242052247175099 0.8618741646780886 0.987533177450137 1.106423119452143 1.0428215618096461 1.1383300039452764 1.1035804368059154 1.0 13.59721722674723 -6.567766889224217 0.9919560935677071 1.0678678447771977 0.481494558526888 0.9570009494762628 0.04768863422500923 0.10031160438140964 0.17976212979233494 0.009459405791984433 0.03807173430306471 2.705410123349265e-07 6.567766889224217 -0.5863732862503097 down SFT(ph)FGAYGGVDK ddPTM_A549_PD325901_60min_R1 2 SFTFGAYGGVDK 12 0 P47736-4 P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 S(0.051)FT(0.949)FGAYGGVDK;S(0.392)FT(0.608)FGAYGGVDK 161.21 5.3464e-14 27623000.0 13212.7 15915.7 15122.3 14364.400000000001 16921.7 15776.2 14652.400000000001 17227.8 17738.0 18481.6 18220.9 True False 14554.043577324359 17256.971895154013 16148.590215777207 15251.656364080647 15733.178168695864 15647.723857782437 15210.005100100927 16884.17801405235 16992.533545556587 17314.6686219104 15979.844811801697 0.9107750262114979 1.0799211192845322 1.0105598900341564 0.9544308185531779 0.9845638899494406 0.9792162591107283 0.9518243311642041 1.0565921141851622 1.0633728766256216 1.0835317129690076 1.0 13.963965777156313 -8.268787515640694 24.93479461478274 1.0327622026575574 0.9854833068041451 0.3249618554451382 0.04514799133760465 686.7692817724164 2330446.916983422 0.007276934481208306 0.008885934254077023 5.385332026118264e-09 8.268787515640694 -0.04727889585341227 SFT(ph)LDDESLK ddPTM_A549_PD325901_60min_R1 1 SFTLDDESLK 10 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.008)FT(0.992)LDDESLK 186.74 3.98e-14 5561500.0 4739.1 4464.9 5532.2 4993.1 5850.2 4748.1 4462.0 5140.8 4709.0 4295.1 5182.1 True False 5220.209943258971 4841.172792567915 5907.648359821104 5301.512446847139 5439.302134094358 4709.433047827541 4631.803851700089 5038.262711120416 4511.097105988612 4023.906652993648 4544.73455203846 1.1486281285487925 1.0652267447383683 1.299888539622481 1.166517512990773 1.1968360465969692 1.0362394093435465 1.0191582805694506 1.1085933960346688 0.9925985894963305 0.8853997096901505 1.0 12.149980316894132 -7.3425030544507 4.230061478722383 1.008900083662239 1.175851091736938 0.5867302309964668 0.07058668644562677 0.11089231239798415 3.6967591336867986 0.009038103436646124 0.014778644453913742 4.544613409113745e-08 7.3425030544507 0.16695100807469898 SFT(ph)PDHVVYAR ddPTM_A549_MK2206_60min_R1 3 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.006)FT(0.994)PDHVVYAR;S(0.316)FT(0.684)PDHVVYAR;S(0.038)FT(0.962)PDHVVYAR 197.3 6.1977e-24 77911000.0 2979.67 4188.89 2835.24 3087.0299999999997 4228.99 3306.5199999999995 3005.52 3403.05 4526.5 5133.8 5356.1 True False 3482.5654500627284 4402.086608804205 3237.3196651843678 3843.352488582041 3606.9111731091757 3656.413751709659 3551.5840799189764 3885.4427589035404 3501.2549773351707 3974.071014421049 4026.032549160155 0.8650117473067136 1.0934056183233034 0.8040967442897808 0.9546252896996023 0.8958971714874958 0.9081927945347585 0.8821548352011832 0.9650798177759535 0.8696539172455386 0.9870936128546836 1.0 11.97514312068739 -11.012956637172133 1.284641291430325 1.0002010959917857 0.9129187228504582 0.15432965106819263 0.07033091870392731 0.6078771637945809 1.779519568900158 0.04631119431333309 0.010391278092726232 9.706068742048264e-12 11.012956637172133 -0.08728237314132758 SFT(ph)PDHVVYAR ddPTM_A549_PD325901_60min_R1 2 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 SFT(1)PDHVVYAR;S(0.002)FT(0.998)PDHVVYAR 144.88 2.0493999999999997e-11 68160000.0 4386.0 3404.8 3922.1 4610.799999999999 4704.1 5118.299999999999 4554.8 4658.8 4660.9 4369.8 5108.5 True False 4831.263491197452 3691.7344451466392 4188.27729150326 4895.598644113432 4373.700244264005 5076.618261766953 4728.135406482194 4565.876579242104 4465.018581716358 4093.8900822452692 4480.186885449618 1.0783620448709477 0.8240134930835922 0.9348443264957546 1.0927219710438763 0.9762316519582137 1.133126450205543 1.0553433433408421 1.0191263659270067 0.9966143591503913 0.9137766318501285 1.0 12.1293431984378 -6.146438937348851 12.305954858131507 1.0170054115951948 0.9333059500580272 0.15635667932188635 0.07787023734764417 0.7480044816815384 76.46199406020375 0.009322419117889823 0.024677621404491232 7.137745561621858e-07 6.146438937348851 -0.08369946153716756 SFT(ph)PGRR ddPTM_A549_MK2206_60min_R1 2 SFTPGRR 7 1 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2;M0QX05 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 S(0.002)FT(0.998)PGRR;S(0.008)FT(0.992)PGRR 56.659 0.022889 3428147000.0 2809.1400000000003 3196.3 3430.4 2690.81 3526.8999999999996 3083.1 2751.54 2784.04 4351.8 5033.200000000001 4927.5 True False 3283.2541551209406 3358.978017498876 3916.8823025382158 3350.058570795052 3008.0976820561773 3409.351595603853 3251.459201489345 3178.6861957649166 3366.1242483965984 3896.1966242907874 3703.8657579183846 0.8864398360285518 0.9068843843267852 1.057511950632776 0.9044762390842761 0.8121508387892447 0.9204846553401946 0.8778555741492917 0.858207722288341 0.9088137822490627 1.0519270618707561 1.0 11.854816095491593 -10.416384371448247 0.8842241090563777 0.9971020938769841 0.9048701424963468 0.3619737919916579 0.059591257690345734 0.6053126139269625 0.890508591456269 0.03310177700922661 0.011140043355910484 3.833677964112859e-11 10.416384371448247 -0.09223195138063733 SFT(ph)PGRR ddPTM_A549_PD325901_60min_R1 2 SFTPGRR 7 1 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2;M0QX05 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 S(0.026)FT(0.974)PGRR;SFT(1)PGRR 73.57300000000001 0.011718000000000001 9073700000.0 3338.1000000000004 3477.8999999999996 3988.8999999999996 3557.7 4289.3 3684.5 3851.9 4301.0 4150.9 4100.4 4155.5 True False 3676.9814546206594 3770.994838691112 4259.610741204291 3777.451048877062 3988.034365281687 3654.4946535920803 3998.4861623405595 4215.213180930772 3976.4521081435796 3841.5000442213573 3644.399843884875 1.008940185526145 1.0347368566099182 1.1688099340558666 1.0365083993775932 1.0942911140701024 1.0027699511962564 1.0971590203116226 1.1566275275759585 1.0911130168156142 1.0540830339094671 1.0 11.83146553720054 -10.701972279129137 1.052991587509945 1.0016800547090583 1.0783097298613646 0.0848099257930316 0.05377053821916748 0.5789408430926384 1.1783894980525336 0.03113163649508226 0.008894845127170913 1.9862216931746313e-11 10.701972279129137 0.07662967515230634 SFTPDHVVY(ph)AR ddPTM_A549_MK2206_60min_R1 1 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 SFTPDHVVY(1)AR 65.5 0.0023394 2962500.0 521.79 1025.3 766.84 497.2 869.55 738.28 637.65 812.6 1112.5 1038.1 1056.6 True False 609.8553954593058 1077.483390589619 875.5894428866617 619.0140223201561 741.6403468859193 816.4042995693989 753.5027511247084 927.7885384831295 860.5205262974434 803.5924890082383 794.2170593235044 0.767869927118874 1.3566611015726535 1.1024561013993686 0.7794015691974909 0.9338005752704824 1.0279359905273164 0.9487365478733542 1.168180068145852 1.0834828038451034 1.011804618869204 1.0 9.633389539225748 SFTPDHVVY(ph)AR ddPTM_A549_PD325901_60min_R1 1 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 SFTPDHVVY(1)AR 69.979 0.0013599 1893300.0 1021.2 934.81 986.74 1052.3 1094.4 1248.0 1148.3 1058.2 1317.9 907.57 1090.9 True False 1124.871472232293 1013.5897194159801 1053.7061101496458 1117.298181053302 1017.5331194750377 1237.8367017730816 1191.9991848738705 1037.0933708581592 1262.5132461207038 850.2658753131349 956.7262157848661 1.1757506522484973 1.0594355027519184 1.1013664021793537 1.1678348127386768 1.0635572671543108 1.2938254239825568 1.245914625529514 1.0840022503275533 1.3196181157061535 0.888724340657484 1.0 9.901962320713453 SFVT(ph)PPQSHFVR ddPTM_A549_MK2206_60min_R1 1 SFVTPPQSHFVR 12 0 H0YLV8;H0YNU5;A0A3B3IT82;P54132 H0YLV8 BLM Bloom syndrome protein 1 S(0.033)FVT(0.966)PPQSHFVR 50.207 0.02632 4475100.0 548.71 536.75 468.5 545.74 882.64 571.61 579.2 493.78 991.51 948.21 934.72 True False 641.3188333284959 564.0682823553866 534.9403447817028 679.4463244991996 752.8048252261376 632.0973907959905 684.4331427137638 563.7748271378288 766.9345681161155 734.0087024395544 702.6032270403804 0.9127752458951311 0.8028262049570236 0.7613690404398875 0.9670412806973203 1.0714508505707048 0.8996505658799974 0.9741389113694289 0.8024085364831768 1.0915614084875787 1.0446987349196577 1.0 9.4565663926152 -6.714775021188876 0.417390958974821 1.0359262140269065 0.7926611764247904 0.25729317630213666 0.0932262889402937 1.6858136889162028 0.41463244151668255 0.028155352182879533 0.16984567210133852 1.9285236931062125e-07 6.714775021188876 -0.24326503760211615 SFVT(ph)PPQSHFVR ddPTM_A549_PD325901_60min_R1 2 SFVTPPQSHFVR 12 0 H0YLV8;H0YNU5;A0A3B3IT82;P54132 H0YLV8 BLM Bloom syndrome protein 1 S(0.001)FVT(0.999)PPQSHFVR;S(0.001)FVT(0.999)PPQSHFVR 98.59200000000001 0.00022321 11648600.0 2181.4 1960.91 2046.5 2072.9 2420.7 2007.85 2268.2 2222.1 2122.8999999999996 2475.8999999999996 2819.1 True False 2402.854122138195 2126.162767514244 2185.3877966042246 2200.938325102528 2250.6783829616434 1991.4987353005463 2354.517592206666 2177.778472296274 2033.6818955836104 2319.5712514602624 2472.3685717472868 0.971883460094316 0.8599699865993806 0.8839247600772382 0.8902144891556634 0.910332872161949 0.8055023664586962 0.9523327626441505 0.8808470133387845 0.8225642077897612 0.9381980008834044 1.0 11.271678115685672 -10.992400754474033 1.2675456816744524 1.0000111175506028 0.8792562451045626 0.25776064241745233 0.049762369056327166 0.315953289851413 0.9032374954616444 0.03278192702292295 0.007496534558129797 1.017651894712746e-11 10.992400754474033 -0.12075487244604022 SFYPEEVSSMVLTK ddPTM_A549_PD325901_60min_R1 2 SFYPEEVSSMVLTK 14 0 P11142;E9PKE3;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 94.465 3.2583e-05 6158700.0 4276.1 5183.7 4924.6 4571.5 5606.5 5957.6 5081.700000000001 5826.1 5745.200000000001 5318.1 4902.1 False True 4710.206524101556 5620.54859119673 5258.812970025485 4853.871172370211 5212.7187813750015 5909.083280835983 5275.086874312942 5709.89386501297 5503.749223471174 4982.314258407379 4299.172776972218 1.0956076362715566 1.3073558293126144 1.2232150794667789 1.1290244482308642 1.2124934381088464 1.3744698311468135 1.2270004365881828 1.3281377979496516 1.280187959169974 1.1589006808691875 1.0 12.069843375786316 -10.70620358110663 0.9464758773822565 0.9988363675863069 1.2456880717175673 0.2730810757441232 0.08985287308302428 0.3231184112594669 0.5109471392681469 0.054134657362629006 0.013875335238351428 1.9669640339540956e-11 10.70620358110663 0.24685170413126045 SFYYLAS(ph)FK ddPTM_A549_MK2206_60min_R1 1 SFYYLASFK 9 0 Q6ZWK6 Q6ZWK6 TMPRSS11F Transmembrane protease serine 11F 1 S(0.003)FYYLAS(0.996)FK 52.278 0.024284 3920200.0 2504.2 2903.2 2343.5 1968.6 3993.5 3089.5 2741.3 2847.0 3819.0 3455.6 3861.1 True False 2926.847738188148 3050.9604794301963 2675.843538945403 2450.9070883738113 3406.0614401574626 3416.4288393558754 3239.358726038051 3250.5709685718334 2954.0025976898296 2674.9775599815694 2902.2823090611237 1.0084641762968163 1.051228017999796 0.9219790681944471 0.8444757702315561 1.1735803334925434 1.1771524874370598 1.1161418432399053 1.1200050933788657 1.0178205574513657 0.9216806895835414 1.0 11.502972143857649 -6.75773809219764 24.999999466122635 1.0479751644762907 0.9608320465562519 0.2601905604017385 0.08890663744932555 139.26498875235265 940638.6612543645 0.013451144989919322 0.027161214262151807 1.7468753146902734e-07 6.75773809219764 -0.08714311792003882 SGAAS(ph)MPS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 2 S(0.001)GAAS(0.997)MPS(0.645)S(0.356)PK 90.61399999999999 0.0013493000000000001 13858000.0 3469.0 2391.6 2578.0 2334.8 2776.3 2606.6 1810.2 2338.8 3270.8 3428.9 3340.0 True False 4054.482391092837 2513.322224650475 2943.5991650954766 2906.826104813156 2367.9099477423724 2882.428681878956 2139.08990839167 2670.3320622746046 2529.9690223943185 2654.309108525524 2510.585820689481 1.6149547080527034 1.0010899463935643 1.172475021900298 1.1578278188533924 0.9431702864840026 1.1481099981228111 0.8520281962734152 1.0636290702626738 1.0077205891728944 1.0572469129123707 1.0 11.29380832692216 -3.0197981769441573 1.2764778965958687 1.0164061161906424 199.9999467493774 0.7246942429844695 0.09917837497646 171.30498896830323 1.0547345384020632 0.012887045816523975 98980.16652142063 0.0009554364883076487 3.0197981769441573 198.98354063318675 SGAAS(ph)MPS(ph)SPK ddPTM_A549_PD325901_60min_R1 2 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 2 S(0.007)GAAS(0.99)MPS(0.504)S(0.499)PK;S(0.004)GAAS(0.986)MPS(0.615)S(0.394)PK 63.091 0.031258999999999995 40717000.0 9542.0 9483.3 10598.4 10912.599999999999 12035.7 10622.4 11155.5 10847.400000000001 10410.0 12298.599999999999 12714.7 True False 10510.69681555086 10282.49097264424 11317.671157356557 11586.64651768722 11190.353952910913 10535.894696245494 11580.028657023835 10631.040097379318 9972.503901750153 11522.064297107787 11150.872505124058 0.9425896324006015 0.9221243421014115 1.0149583498650758 1.039079813024758 1.0035406599590042 0.9448493551875901 1.0384863293614532 0.9533819073345278 0.8943249864230427 1.0332881388261912 1.0 13.444868978445546 -8.4876656667484 24.32060624964832 0.9487166135239432 0.9869037968586988 0.0 0.04965006105863166 771.8548580145507 533097.6968929229 0.008567906729616638 0.010355489227968721 3.2533765594153998e-09 8.4876656667484 0.03818718333475557 SGAASMPS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 SGAAS(0.059)MPS(0.578)S(0.364)PK 58.37 0.0040796 31304000.0 389.6 440.08 359.65 459.62 587.46 500.33 440.33 433.26 536.87 834.87 594.91 True False 455.3549551945142 462.4781922663411 410.6537780165198 572.2269206331257 501.04541220355634 553.2745885078255 520.332261276159 494.67593180310234 415.26980220522137 646.2722871576032 447.1774283192747 1.01828698489093 1.0342163154445756 0.9183240298151233 1.2796417806324707 1.1204622158295099 1.2372596501288515 1.1635924094644896 1.1062184727488409 0.9286466084972607 1.445225644743811 1.0 8.804703558470848 -8.749674976693523 23.059051466998373 0.9663053485957764 1.112916799727229 0.0 0.17343095654872598 76.79889565457154 150530.36716500556 0.01696505499532492 0.019143971192122983 1.7796107614857437e-09 8.749674976693523 0.14661145113145246 SGAASMPSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 SGAASMPS(0.152)S(0.848)PK;SGAASMPS(0.068)S(0.932)PK 176.18 2.0599000000000002e-15 70713000.0 6818.5599999999995 9198.619999999999 7918.33 7372.48 11131.08 8576.41 9555.1 9125.87 12614.5 12072.13 13315.6 True False 7969.366230213309 9666.790467517287 9041.26826103586 9178.737930963202 9493.712877252516 9483.96001363979 11291.137986782254 10419.490019304749 9757.335891217168 9345.027448541583 10008.969028135582 0.7962224888308802 0.965812806528183 0.9033166388686509 0.9170512872166384 0.9485205569689883 0.947546144560946 1.1281020008197096 1.041015312367855 0.9748592351309048 0.9336653377857765 1.0 13.289005756860519 -7.063259564901401 1.799041933764938 1.0018761225192563 0.8993632173191558 0.42182463911619006 0.06045586023855231 0.2777158906244438 1.7744058830842506 0.008798507730757006 0.018013743260994683 8.644511076205788e-08 7.063259564901401 -0.10251290520010048 SGAASMPSS(ph)PK ddPTM_A549_PD325901_60min_R1 4 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 SGAASMPS(0.156)S(0.844)PK;SGAASMPS(0.152)S(0.848)PK;SGAASMPS(0.064)S(0.936)PK;SGAASMPS(0.073)S(0.927)PK 179.35 6.7209e-16 205989000.0 15589.300000000001 15387.2 16097.6 14144.900000000001 18502.0 17209.1 15930.900000000001 16859.5 16270.000000000002 16352.9 16945.2 True False 17171.914259763897 16683.93334538309 17190.07993873254 15018.59834760131 17202.483348434896 17068.95479525891 16537.15911722299 16523.224046478106 15586.228480449088 15320.37510319662 14861.04782447311 1.1554982167196355 1.1226619779735896 1.1567205853697604 1.0106015756754883 1.1575552108853266 1.1485700737164595 1.1127855392531385 1.1118478482565497 1.0487974108246765 1.0309081354254908 1.0 13.85924822072048 -8.988703101347454 1.072348599323165 1.0131222968517501 1.1243333789200722 0.5298234904910268 0.04030054726039171 0.2212874418188484 0.5205022434343631 0.00909221422840822 0.008639877616993145 1.0263533369293168e-09 8.988703101347454 0.11121108206832209 SGAEGDDTGAPHS(ph)PQER ddPTM_A549_MK2206_60min_R1 2 SGAEGDDTGAPHSPQER 17 0 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 SGAEGDDTGAPHS(1)PQER;SGAEGDDT(0.001)GAPHS(0.999)PQER 91.889 1.57e-06 8148400.0 440.55 389.95000000000005 537.58 295.64 504.28000000000003 412.78 443.71000000000004 322.57 404.38 573.5 629.8499999999999 True False 514.90406958661 409.7967893888831 613.8169275298784 368.0718132717839 430.1010800156766 456.46010561881207 524.3263635247305 368.29528532919403 312.7885756621664 443.94595168695145 473.44086202433203 1.087578430355568 0.8655712302412587 1.296501795187953 0.777439893333219 0.9084578761889208 0.9641333104774398 1.1074801640120857 0.7779119101685521 0.660670847726893 0.9377009618238978 1.0 8.887040418229557 -8.275577120422886 24.23721272558994 0.8306452729056971 0.9935997042058657 0.19358496880997278 0.15273216965187947 722.2091210499295 1238125.5320952286 0.028061696015981144 0.03401390972838189 5.301794369476611e-09 8.275577120422886 0.16295443130016862 SGAEGDDTGAPHS(ph)PQER ddPTM_A549_PD325901_60min_R1 2 SGAEGDDTGAPHSPQER 17 0 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 SGAEGDDT(0.01)GAPHS(0.99)PQER;SGAEGDDTGAPHS(1)PQER 98.26899999999999 3.7330999999999995e-07 8257100.0 278.29 224.95 296.94000000000005 285.62 497.85 498.32000000000005 468.25 460.48 389.609 505.65 436.93 True False 306.54179593372993 243.9073259620937 317.0921340452762 303.26209870991585 462.882733489261 494.2618471374697 486.0695099862315 451.2953651604282 373.2350886317937 473.7231727052312 383.19037992747405 0.7999725775781446 0.6365173520490199 0.8275054663566759 0.7914136538796038 1.2079706530651166 1.2898597486477035 1.2684804615351493 1.1777314588269265 0.9740199863640507 1.2362606096606397 1.0 8.581917532150644 -6.659077064355415 6.86783790434193 1.0593809592937147 0.754480447652301 0.6278866451574711 0.1337515917909481 0.14994518962138836 8.86014369520163 0.021665207367910465 0.04528173568333074 2.1924158626965816e-07 6.659077064355415 -0.30490051164141363 SGAGSS(ph)PETK ddPTM_A549_MK2206_60min_R1 2 SGAGSSPETK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGAGS(0.006)S(0.994)PETK;SGAGS(0.132)S(0.868)PETK 177.04 6.9972e-11 349910000.0 56248.0 46468.0 36134.0 23891.0 11320.2 7688.6 7230.299999999999 7382.4 7915.8 63261.0 67957.0 True False 65741.28726843174 48833.02271912457 41258.3445428859 29744.296072507754 9655.013575778263 8502.202548720375 8543.95191948087 8428.87780765181 6122.883938935103 48970.29616332737 51081.40138221409 1.2869906754618137 0.9559843974078523 0.8076979766896438 0.5822920919876006 0.18901230809106226 0.16644419140154476 0.16726150200052595 0.16500874250851388 0.11986523026494365 0.958671744279479 1.0 15.640510484453781 -4.224387207192541 12.026948932402812 0.5463728089895324 0.8013936916130279 0.0 0.41612612675191746 103345413.18241417 0.0 0.06251844093675299 0.0 5.9650322057426354e-05 4.224387207192541 0.2550208826234954 SGAGSS(ph)PETK ddPTM_A549_PD325901_60min_R1 2 SGAGSSPETK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGAGS(0.165)S(0.835)PETK;SGAGS(0.002)S(0.998)PETK 227.14 4.1833999999999994e-35 699570000.0 56961.0 54575.0 48269.0 44311.0 52572.0 38567.0 28696.7 36506.0 39709.0 54731.0 67926.0 True False 62743.63878752806 59174.22678097913 51544.824605076596 47047.98983241744 48879.524083554184 38252.92313884812 29788.768621936764 35777.85919159701 38040.16882176722 51275.27531954913 59571.532618391066 1.0532486916100878 0.9933306091022195 0.865259333434768 0.7897730302458708 0.8205181558223664 0.642134278865919 0.500050398447199 0.6005865153879151 0.6385628697090692 0.8607345331874054 1.0 15.862335455846125 -5.818625553671966 1.5238406681771794 0.7684884778849175 1.0659273892527386 0.4016623392438553 0.1340972384718731 0.5797248649118499 2.2514907742230097 0.026413598823340066 0.18880563903878841 1.5183589240266295e-06 5.818625553671966 0.2974389113678211 SGAHSS(ph)ASPPR ddPTM_A549_MK2206_60min_R1 1 SGAHSSASPPR 11 0 E9PD43;A0A0A0MSN9;A0A0A0MT02;A0A0G2JI50;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 SGAHS(0.076)S(0.562)AS(0.361)PPR 83.204 0.00019316 4442200.0 516.83 594.74 287.0 383.59 468.6 452.4 468.13 376.41 675.58 493.07 742.89 True False 604.0582687196634 625.0097256600702 327.7009155866568 477.5695672200092 399.6695607506666 500.2726677211843 553.1831614271304 429.76727020727907 522.5622086795751 381.6851445480126 558.4099102790439 1.0817470420928033 1.1192668936476176 0.5868465253829411 0.8552311813043616 0.7157279149128051 0.8958878746818664 0.9906399425302076 0.7696268678192323 0.9358039659762569 0.6835214374280717 1.0 9.125180735519207 -9.350382922091194 1.2585141201568055 0.9840425114378573 0.8734203082178671 0.0 0.17302639057569444 0.7274585037839362 2.393070515478688 0.035763908818309764 0.029529989264761452 4.462899200266786e-10 9.350382922091194 -0.11062220321999017 SGALEPPT(ph)SAPPTLALVPGGAAAR ddPTM_A549_MK2206_60min_R1 1 SGALEPPTSAPPTLALVPGGAAAR 24 0 Q9P244 Q9P244 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 1 S(0.001)GALEPPT(0.497)S(0.497)APPT(0.004)LALVPGGAAAR 44.382 0.042127 1454700.0 381.17 796.25 449.41 489.38 813.68 732.39 396.52 566.41 909.59 913.82 835.95 True False 445.5021772882263 836.7757239412704 513.1430957275245 609.2781219691026 693.988749875378 809.891023678864 468.56255136198445 646.7003520578753 703.5693173167565 707.3874273244468 628.360543953704 0.7089913292217306 1.3316808828832543 0.8166379965533476 0.9696314127801007 1.1044435500496819 1.2888954143793834 0.7456906005169334 1.0291867595453648 1.1196904772057008 1.1257667817165893 1.0 9.295448783472645 -5.214334475431563 22.88018910371749 1.0463658358998442 0.7089871241601801 0.2589832641865254 0.16700377888911208 13595.676610944935 6603324.11162231 0.02060519974997665 16.729207008695386 6.104716840720399e-06 5.214334475431563 -0.33737871173966416 SGAMS(ph)PMSWNSDASTSEAS ddPTM_A549_MK2206_60min_R1 1 SGAMSPMSWNSDASTSEAS 19 0 Q13158 Q13158 FADD FAS-associated death domain protein 1 S(0.049)GAMS(0.944)PMS(0.005)WNSDASTSEAS(0.001) 42.913000000000004 0.018965 4355300.0 510.87 543.46 555.99 466.18 1021.9 444.88 621.63 662.18 917.25 707.43 1073.1 True False 597.0923664276733 571.1197926946593 634.8377423589734 580.3941209276156 871.5798637027444 491.9569063125562 734.5721244909473 756.0460428411998 709.4943395472633 547.6210716685272 806.6196539466708 0.740240289839441 0.7080410078036835 0.7870348053792219 0.7195387790116853 1.0805338791811394 0.6098994785280568 0.9106796752308159 0.9373017867119628 0.8795897001465465 0.6789086640637854 1.0 9.655744748389765 -2.0689420193632246 0.07993704651858674 1.147719162861428 4.5649752894970236e-08 0.0 0.14540497636300517 117.66254557359707 0.6746906002070823 1.4552797386904874 14.941716527022525 0.008532140150498586 2.0689420193632246 -1.1477191172116752 SGAMS(ph)PMSWNSDASTSEAS ddPTM_A549_PD325901_60min_R1 1 SGAMSPMSWNSDASTSEAS 19 0 Q13158 Q13158 FADD FAS-associated death domain protein 1 S(0.038)GAMS(0.953)PMS(0.008)WNSDASTSEAS 56.851000000000006 0.002025 10132000.0 1200.6 1179.7 1405.2 1130.7 1337.3 1677.5 1256.2 1663.4 1297.4 1569.4 1839.9 True False 1322.484028164994 1279.117459157511 1500.565322154045 1200.540770993984 1243.3726614345462 1663.8389961733533 1304.0053784190168 1630.2221820879436 1242.8747898300335 1470.3078161645199 1613.6039640870601 0.819584022844927 0.7927084263710309 0.9299464772962616 0.7440120362329565 0.7705562759558648 1.031132194270925 0.8081322353200793 1.0102988207582184 0.7702477296114126 0.9111949703199856 1.0 10.65607081795076 SGAQAS(ph)STPLSPTR ddPTM_A549_MK2206_60min_R1 1 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQAS(0.953)S(0.039)T(0.008)PLSPTR 100.43 3.1555e-05 7236000.0 2633.0 2724.2 2287.2 2400.5 2177.1 2410.3 2099.2 2085.5 3103.4 3301.2 3957.6 True False 3077.386029330481 2862.8501440010123 2611.559352368646 2988.62260776254 1856.8514739869308 2665.3563461723497 2480.5974675150774 2381.1260115758873 2400.4848551114483 2555.456627217027 2974.818695796611 1.034478515843267 0.9623612181966554 0.8778885772295143 1.004640253197761 0.6241897957044049 0.8959727024502272 0.8338650926929217 0.8004272713965375 0.8069348422824253 0.859029369026039 1.0 11.538586028832006 -5.421478078134312 1.427014679062661 0.878262461617298 1.072226309250938 0.22337143859277864 0.09959168644120868 1.3192734880018364 2.9692014641398967 0.01607585827204233 0.3327947547353593 3.788976588681483e-06 5.421478078134312 0.19396384763364005 SGAQASS(ph)TPLS(ph)PTR ddPTM_A549_MK2206_60min_R1 1 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 S(0.001)GAQAS(0.111)S(0.678)T(0.214)PLS(0.875)PT(0.122)R 63.128 0.006631000000000001 1614000.0 701.99 729.94 757.86 607.92 661.85 503.34 752.66 677.51 705.35 915.92 627.42 True False 820.4687499922918 767.0908281741793 865.3359438554138 756.8604272905656 564.4927417473936 556.6031047099486 889.4085794111558 773.5491172873557 545.5893512124962 709.0130358659336 471.61429808892 1.739702874397581 1.626521569177593 1.8348382298033297 1.604829264841042 1.1969372939599934 1.1802082908966525 1.8858812869228643 1.6402155753588024 1.1568549838784334 1.5033747677689226 1.0 8.881463647425068 -8.68215751978623 0.27461671555552225 0.879561502712849 1.7780948866902522 0.08338853930868695 0.27769921263352004 0.9724890421692648 0.24847892713062192 0.2940425961183872 0.2848982907539834 2.0789425122548245e-09 8.68215751978623 0.8985333839774031 SGAQASST(ph)PLS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 SGAQAS(0.012)S(0.099)T(0.889)PLS(0.974)PT(0.026)R;S(0.001)GAQAS(0.015)S(0.144)T(0.84)PLS(0.885)PT(0.115)R 106.76 2.847e-05 118309000.0 6593.5 5819.5 6301.4 5667.5 10256.0 7474.5 6446.8 6541.6 9932.2 8970.8 9688.900000000001 True False 7706.3216044020255 6115.687692905772 7195.03327344167 7056.037754423742 8747.35598604105 8265.446628828455 7618.100111269151 7468.891832809799 7682.572558464241 6944.290049508815 7282.878729963566 1.0581422388232706 0.8397349344489725 0.9879380860537361 0.9688528418568135 1.201084943245349 1.1349147686370722 1.0460286919135975 1.0255411506552936 1.0548812967125536 0.9535089498247838 1.0 12.830293107135926 -6.5525127367181115 24.999990090224944 1.0479073065006042 0.9544974308603015 0.24728214821929084 0.0785222675470548 216.5615284165736 182696.14100706537 0.010792545836253522 0.022466689948279623 2.8021234415303977e-07 6.5525127367181115 -0.09340987564030268 SGAQASST(ph)PLS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 2 SGAQAS(0.039)S(0.4)T(0.561)PLS(0.982)PT(0.018)R;SGAQAS(0.008)S(0.083)T(0.908)PLS(0.981)PT(0.019)R 134.02 9.5517e-09 178249000.0 9502.2 9199.5 9752.8 10745.6 12737.3 13904.5 12491.6 11687.5 19819.3 11236.0 12770.0 True False 10466.856348850077 9974.774150648062 10414.683656350686 11409.331306971746 11842.675989299523 13791.266362022281 12966.97467366581 11454.383643833626 18986.363744472317 10526.557042452238 11199.370955699644 0.9345932365534537 0.890654858215197 0.9299346987922023 1.0187475128828773 1.0574411755932136 1.2314322310221857 1.1578306250376134 1.0227702688965936 1.6953062649299668 0.9399239550231172 1.0 13.451130081066362 -7.197253895905021 0.914683398927288 1.3075502789796736 0.9107338132140602 0.0992349597198181 0.2064845669643171 0.5651108333229801 0.9264110747607694 0.04509426884922509 0.11278260523246414 6.349596151849046e-08 7.197253895905021 -0.39681646576561336 SGAQASST(ph)PLSPTR ddPTM_A549_MK2206_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASS(0.028)T(0.971)PLS(0.001)PTR;SGAQASS(0.022)T(0.975)PLS(0.002)PTR 204.67 9.163399999999998e-32 139594000.0 9480.5 10519.4 9680.2 9407.5 11741.8 8662.8 10152.5 8896.6 14912.599999999999 13797.099999999999 14327.5 True False 11080.576624028725 11054.792528009786 11052.997920076496 11712.337922318724 10014.596774268406 9579.491746098756 11997.077833911406 10157.720294694822 11534.919910528775 10680.325527497896 10769.58633111632 1.0288767166491686 1.0264825582083341 1.0263159215448527 1.087538328977273 0.9298961414454203 0.8894948655939504 1.113977590694317 0.9431857438522363 1.0710643432237685 0.9917117704548666 1.0 13.394675215363913 -13.018486790942024 14.16994920267908 0.3416778135398728 1.0210787195486841 0.0 0.06651431833986411 0.0 0.0 0.0 0.008369287168583185 9.583258633250745e-14 13.018486790942024 0.6794009060088113 SGAQASST(ph)PLSPTR ddPTM_A549_PD325901_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASS(0.031)T(0.96)PLS(0.009)PTR;SGAQASS(0.006)T(0.989)PLS(0.006)PTR 190.18 2.0929e-26 170102000.0 24210.7 23045.0 26675.0 28359.0 33283.0 29324.0 28914.0 30110.0 30674.0 27833.0 31698.0 True False 26668.552441024684 24987.083026434542 28485.325909805855 30110.67102203801 30945.316900116664 29085.195066341206 30014.33809234789 29509.432429161963 29384.878451708377 26075.619629990517 27799.34695017753 0.9593229829758421 0.8988370507845679 1.0246760818107616 1.0831431067788346 1.113167045095606 1.0462546159256259 1.0796778120773882 1.0615153112067446 1.0570348470549493 0.9379939635533056 1.0 14.762763371749795 -5.853343481143733 5.64087112254815 1.0444884804844061 0.929840247805242 0.4891458131904397 0.045899746108096495 0.10538919521866622 5.104068979627625 0.005554008555944782 0.01800167603175116 1.4017046654568347e-06 5.853343481143733 -0.11464823267916413 SGAQASSTPLS(ph)PTR ddPTM_A549_MK2206_60min_R1 9 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASST(0.001)PLS(0.999)PTR;SGAQASST(0.001)PLS(0.998)PTR;SGAQASST(0.006)PLS(0.713)PT(0.28)R;SGAQASSTPLS(0.5)PT(0.5)R;SGAQASS(0.004)T(0.139)PLS(0.539)PT(0.317)R;SGAQASST(0.001)PLS(0.998)PT(0.001)R;SGAQASSTPLS(0.818)PT(0.181)R;SGAQASSTPLS(0.965)PT(0.035)R;SGAQASSTPLS(0.997)PT(0.002)R 184.37 4.7402999999999995e-26 5229939900.0 32253.420000000002 37248.85 34056.060000000005 32173.760000000006 43772.72000000001 34533.44 35300.130000000005 35525.85 51047.700000000004 51725.90999999999 50957.759999999995 True False 37697.008775589966 39144.65736229798 38885.721405136326 40056.332644334965 37333.81087337157 38187.745699357765 41713.70668871615 40561.7480308527 39485.4774564261 40040.99100579532 38303.54182937053 0.9841650921869715 1.0219592103694832 1.0151991055646814 1.0457605414865427 0.9746829951047664 0.9969768819152913 1.089030013844066 1.0589555454569117 1.0308570845046314 1.0453600135508236 1.0 15.225190180143995 SGAQASSTPLS(ph)PTR ddPTM_A549_PD325901_60min_R1 9 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASSTPLS(1)PTR;S(0.001)GAQAS(0.041)S(0.152)T(0.191)PLS(0.492)PT(0.124)R;SGAQASSTPLS(1)PTR;SGAQASSTPLS(0.997)PT(0.003)R;SGAQASS(0.001)T(0.032)PLS(0.961)PT(0.006)R;SGAQASSTPLS(0.674)PT(0.326)R;SGAQASSTPLS(0.981)PT(0.019)R;SGAQASS(0.001)T(0.007)PLS(0.952)PT(0.04)R;SGAQASS(0.001)T(0.003)PLS(0.966)PT(0.03)R 221.44 7.749899999999999e-47 6240615400.0 46636.36 49050.91 46229.57 46321.89 55516.369999999995 51496.83 51787.6 52584.85999999999 52313.82000000001 56577.439999999995 59390.939999999995 True False 51370.84893532636 53184.6023298836 49366.98662118774 49183.0879406549 51617.091692279246 51077.45689019958 53758.40545726206 51536.013715275345 50115.25207160949 53005.13078283368 52086.23089018794 0.9862654305632174 1.0210875584760843 0.9477934144489527 0.9442627562041558 0.9909930284858245 0.9806326166676347 1.0321039656449613 0.9894364179264075 0.9621593118777626 1.017641896465556 1.0 15.668614422843236 SGAQASSTPLSPT(ph)R ddPTM_A549_PD325901_60min_R1 1 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQAS(0.034)S(0.004)T(0.003)PLS(0.195)PT(0.765)R 53.086999999999996 0.018335 13346000.0 2692.0 2767.6 2582.3 2639.6 3256.0 2588.7 2989.1 3146.8 2806.7 3380.1 3327.0 True False 2965.2898582543417 3000.835364893046 2757.550406631362 2802.642097033448 3027.3097925902075 2567.618485480748 3102.8518361982833 3084.034605383157 2688.744159562166 3166.679909148526 2917.800091590656 1.016275880859883 1.028458177632424 0.9450785934851579 0.9605325961538274 1.0375315983144862 0.8799843734602789 1.063421666597709 1.0569725507486285 0.9214970440611581 1.0852970764772962 1.0 11.51066532735914 -8.785053058028454 24.9925317297606 0.9629291744482696 0.9959924847433633 0.0 0.06524672892835662 507.4796397606914 537110.1500155106 0.00978016702495752 0.010414698981775347 1.640389353563896e-09 8.785053058028454 0.033063310295093684 SGAQASSTPLSPT(ph)RITR ddPTM_A549_PD325901_60min_R1 1 SGAQASSTPLSPTRITR 17 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASS(0.001)T(0.005)PLS(0.253)PT(0.663)RIT(0.077)R 55.208 0.004524 6708400.0 1476.4 1338.4 1601.8 1743.8 1567.6 1940.2 1755.4 1870.8 1831.3 1868.6 2109.8 True False 1626.2830411317643 1451.191665115208 1710.5077804058853 1851.5105655428576 1457.4971839264153 1924.39965447126 1822.2027075917379 1833.4854263857906 1754.3368295172954 1750.6162771027289 1850.3079751241264 0.8789255967092 0.7842973627230115 0.9244449050656756 1.0006499406773894 0.7877051839592489 1.0400428903421677 0.9848104921395568 0.9909082439439806 0.9481323396444893 0.9461215649709829 1.0 10.85354970524434 -6.06088422044011 0.5956396745389843 0.9795850168138662 0.8025384533910827 0.33190584976176374 0.06664750509047872 1.3458643459685276 0.544957352073601 0.01155604326487779 0.1361611680263558 8.691921183177959e-07 6.06088422044011 -0.17704656342278358 SGAQASSTPLSPTR ddPTM_A549_PD325901_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 106.58 5.2688999999999996e-05 18765300.0 15680.0 15019.6 15486.699999999999 15925.0 18064.1 16883.5 17068.2 18366.1 17854.199999999997 19405.1 19477.4 False True 17271.822056994093 16285.354403290783 16537.720591092417 16908.65108170089 16795.33993376189 16746.006373706576 17717.73969107742 17999.773727573276 17103.850063652968 18179.858674304924 17081.803277411444 1.011124046829056 0.9533744265060197 0.968148404621981 0.989863353833402 0.9832299120299339 0.980341835211923 1.0372288805425434 1.053739668772309 1.00129065918179 1.0642821708610544 1.0 14.060172663761561 -7.585915455433736 24.996745816135583 1.0079880454215397 0.979608794172336 0.3381906103473995 0.027231319042243265 66.21733069984158 26257.47176397031 0.0034958139463253644 0.0051851305787878185 2.594684422918575e-08 7.585915455433736 -0.028379251249203707 SGAQTPKS(ph)PPEHYVQETPLMFSR ddPTM_A549_MK2206_60min_R1 1 SGAQTPKSPPEHYVQETPLMFSR 23 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.1)GAQT(0.377)PKS(0.521)PPEHY(0.001)VQETPLMFSR 42.536 0.019805 5072500.0 937.98 1390.4 872.3 1026.2 1201.4 759.49 1029.5 890.71 1706.5 1820.4 1987.4 True False 1096.2880925907352 1461.1654211214345 996.0052566767976 1277.619046067868 1024.6756514849562 839.85872769134 1216.5468239361524 1016.9708701849728 1319.9804747205274 1409.170375677292 1493.8737305503817 0.7338559278278723 0.9781050374204676 0.6667265353878628 0.8552389803368189 0.6859185154206033 0.5622019522238432 0.814357197035619 0.6807609300488164 0.8835957469003839 0.9432995218130766 1.0 10.54484249436391 -9.16143401848984 1.457561578079458 0.9650704816419788 0.7497791545058623 0.39198012324361453 0.10733215111802427 0.24347173591191285 1.06708477559404 0.023121609551302984 0.02115249691484786 6.895503472470953e-10 9.16143401848984 -0.21529132713611654 SGAQTPKS(ph)PPEHYVQETPLMFSR ddPTM_A549_PD325901_60min_R1 2 SGAQTPKSPPEHYVQETPLMFSR 23 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.077)GAQT(0.064)PKS(0.858)PPEHYVQETPLMFSR;S(0.061)GAQT(0.27)PKS(0.669)PPEHY(0.001)VQETPLMFSR 70.028 0.00010496 11783200.0 3727.8 3947.8 3105.5 3257.3 5029.0 4363.3 4151.2 3735.3 4064.5 4334.5 4455.3 True False 4106.243511738686 4280.494960805303 3316.2579048885473 3458.496023134965 4675.780389108154 4327.766731447504 4309.176187623799 3660.796511213837 3893.683199679491 4060.8189302696 3907.326344473655 1.050908767205066 1.0955048499748277 0.8487281615416926 0.8851310891977336 1.1966700441393552 1.107603089659634 1.1028452214436868 0.9369057479397649 0.9965083170456288 1.039283277685018 1.0 11.931966040795826 SGATAGAAGGR ddPTM_A549_PD325901_60min_R1 1 SGATAGAAGGR 11 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 79.48899999999999 0.0026561999999999996 4043900.0 1515.4 1401.3 826.47 1189.4 1061.3 1092.9 843.64 1430.8 1270.6 1696.5 1454.4 False True 1669.2422924214818 1519.392468862777 882.5592241678435 1262.8665366766113 986.7579492862371 1083.9997847498407 875.7451818575217 1402.2615715591141 1217.201100630522 1589.3827004734978 1275.5180202012175 1.3086779378923654 1.191196396130168 0.6919221917606594 0.9900812976969072 0.7736134916624483 0.8498506234971388 0.6865800153253576 1.0993663353638097 0.9542798152224491 1.246068401466227 1.0 10.316867565783019 -5.576913789582198 8.623393818590344 0.9309090159164863 1.2797852500527183 0.3891861066524003 0.161109984790475 0.14782970451259608 21.51909399890697 0.01789747546615144 0.06995572923828085 2.6490259361401154e-06 5.576913789582198 0.3488762341362319 SGAVQGAGSLGPGS(ph)PVR ddPTM_A549_MK2206_60min_R1 3 SGAVQGAGSLGPGSPVR 17 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 SGAVQGAGS(0.003)LGPGS(0.997)PVR;SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR 227.64 1.0520999999999998e-63 58843000.0 13008.2 15055.8 14380.3 13115.400000000001 19200.4 14500.0 13379.0 14799.0 21924.0 21604.8 21261.199999999997 True False 15203.666140044355 15822.075911478762 16419.642774950524 16328.673588772686 16376.04659461609 16034.380375678991 15809.791119418926 16896.80357003671 16958.249005433845 16724.26067481474 15981.457260731493 0.9513316521767842 0.9900271078755533 1.0274183703694975 1.0217261994558124 1.0246904476511134 1.0033115324894393 0.9892584175202612 1.0572755221486805 1.0611203176760642 1.0464790789703773 1.0 13.964111345198027 -5.446949273817907 2.040163541941688 1.0263061643038092 0.9434998969391739 0.5187539351773385 0.021832216061492347 0.36461189676749534 2.1574216270735818 0.00377716423537658 0.04820170910621905 3.573145705391498e-06 5.446949273817907 -0.08280626736463526 SGAVQGAGSLGPGS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 SGAVQGAGSLGPGSPVR 17 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR 235.54 8.171499999999998e-74 94724000.0 18562.2 18495.7 18079.9 20355.0 22826.0 19756.4 19216.5 19761.0 20368.2 20401.7 21426.5 True False 20446.620879230602 20054.397549664805 19306.910737270806 21612.28212044091 21222.780505425093 19595.510428613543 19947.794423172294 19366.851352795406 19512.19538632347 19113.533180224105 18791.17633377433 1.0880969086794667 1.0672241691234639 1.0274455624456849 1.1501292807090562 1.1294013811833759 1.0428038181619075 1.0615511274469347 1.0306353901850407 1.0383700860309217 1.017154692219581 1.0 14.197767762314992 -8.503587998478803 0.6572781776335979 1.010176269243641 1.0877526035430547 0.4522761405968668 0.03302263865402679 0.44132897802116056 0.4005255005322501 0.009365732089029306 0.011072408438062994 3.1362595843555996e-09 8.503587998478803 0.0775763342994138 SGCCDDSALARS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 SGCCDDSALARSPAR 15 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 SGCCDDS(0.006)ALARS(0.994)PAR 62.203 0.0013772 1706600.0 405.83 522.32 566.6 279.81 608.75 398.02 263.0 352.07 537.11 775.34 620.4 True False 474.32418240911096 548.9038569909 646.9523999003477 348.36346256114825 519.203681406249 440.13821221570703 310.7836956728587 401.977000669155 415.45544258842244 600.1901555029837 466.33755783106375 1.0171262735414086 1.1770526473223648 1.3873049447471564 0.7470199573488931 1.1133644989287708 0.9438189243491133 0.66643505429482 0.8619871891484577 0.8908899478753244 1.287029417691486 1.0 8.865230815709474 -6.26406549689167 24.999960811837205 0.9217768156249091 1.1921504206827274 0.2874473639838637 0.1773376181646582 164.1278910480388 1562464.6983527322 0.019427307453845435 0.0471497963796027 5.44420541409595e-07 6.26406549689167 0.27037360505781827 SGCS(ph)DLEEAVDSGADKK ddPTM_A549_PD325901_60min_R1 2 SGCSDLEEAVDSGADKK 17 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 S(0.057)GCS(0.943)DLEEAVDSGADKK;S(0.004)GCS(0.996)DLEEAVDSGADKK 115.36 8.509200000000002e-15 17239000.0 4756.3 6383.4 5231.7 5045.4 4746.0 6194.8 5141.7 6760.4 4424.1 6397.8 6320.7 True False 5239.156074597002 6921.351520544251 5586.754622767808 5357.042899065218 4412.657332811154 6144.351602679398 5337.3702071462 6625.558518568796 4238.170462222175 5993.8418161446225 5543.293970218535 0.9451340850303952 1.2485990383568615 1.0078402214969593 0.9664006505601264 0.7960352376255436 1.1084296874187185 0.9628517332512646 1.195238526797379 0.7645581282522335 1.0812779997500883 1.0 12.436527802864394 -8.77324520830094 24.999833834714117 0.8888191343940995 1.0260581524630954 0.014741054297878309 0.14049238698279612 290.8171477627496 615827.6706489754 0.02421162180633093 0.02587783488480585 1.6856010444374976e-09 8.77324520830094 0.13723901806899585 SGCSEAQPPES(ph)PETR ddPTM_A549_MK2206_60min_R1 2 SGCSEAQPPESPETR 15 0 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 SGCSEAQPPES(1)PETR;SGCSEAQPPES(0.999)PET(0.001)R 254.72 9.149399999999998e-77 56350000.0 5894.7 6518.200000000001 5690.799999999999 4901.8 7084.0 5840.0 5295.2 5468.2 8371.6 8098.200000000001 8967.3 True False 6889.581248421718 6849.948538516784 6497.841011918284 6102.741220050161 6041.952984118055 6457.984923721741 6257.269297820995 6243.334095660168 6475.4459666981365 6268.810995555837 6740.471925110413 1.0221214960863236 1.0162416837608261 0.9640038685884512 0.9053878256380683 0.89636943099041 0.9580909164035952 0.9283132349399256 0.9262458422832015 0.9606813942173736 0.9300255331088185 1.0 12.718633887965618 -10.070014261135448 0.9416096526268884 0.9959924676894991 0.9512568194686853 0.0 0.04279282193045982 0.7048109769001981 1.2551652379104163 0.01659170382232006 0.00802017722562613 8.511100894347502e-11 10.070014261135448 -0.04473564822081377 SGCSEAQPPES(ph)PETR ddPTM_A549_PD325901_60min_R1 2 SGCSEAQPPESPETR 15 0 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 SGCSEAQPPES(0.817)PET(0.183)R;SGCSEAQPPES(0.807)PET(0.193)R 270.79 6.993499999999999e-91 72171000.0 6485.0 6307.700000000001 5778.8 5793.1 6748.1 7224.9 6671.0 6614.0 5528.0 6353.299999999999 6896.3 True False 7143.35242599532 6839.272015875078 6170.984118747364 6150.926629915315 6274.136735681199 7166.062809807958 6924.8685555112725 6482.078581417378 5295.677384137832 5952.1515537390405 6048.098819247567 1.1810905607663353 1.1308135366620777 1.020318004578352 1.0170016750289375 1.0373733834695764 1.1848455231919433 1.1449661724232183 1.071754740644896 0.8755937266244366 0.9841359626593431 1.0 12.562265996455483 -8.647912020123007 6.291799725801373 0.9415043031203245 1.0982514127581402 0.5137573197322789 0.06304068011588218 0.13167590690306427 6.8490492783208285 0.012414709201954467 0.014067998260226878 2.249510268064279e-09 8.647912020123007 0.15674710963781568 SGDAAIVDMVPGKPMCVESFSDYPPLGR ddPTM_A549_PD325901_60min_R1 1 SGDAAIVDMVPGKPMCVESFSDYPPLGR 28 1 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 0 81.34100000000001 3.8057e-06 7970200.0 3194.6 2376.4 2829.4 3127.8 3715.8 3697.6 3227.4 3867.4 2893.4 3280.9 3078.1 False True 3518.9134402597783 2576.667567976525 3021.420098564374 3320.9971022508034 3454.8150268140935 3667.487971535372 3350.220473101043 3790.261673083391 2771.8004600695385 3073.7434140781047 2699.513213683561 1.3035362903292194 0.9544934082617771 1.1192462712347913 1.230220724765118 1.279791856288009 1.3585738172887039 1.241046147179096 1.4040537582372021 1.0267778820342723 1.1386287714753935 1.0 11.398483563227026 -8.886119299216084 9.998495829301667 1.0118141610464664 1.2284551802974457 0.2919648237767003 0.12038611955794695 0.2201990624013394 18.508116100011453 0.02064312977395656 0.021954885576953954 1.2998124749250029e-09 8.886119299216084 0.21664101925097934 SGDDLFPKDDK ddPTM_A549_MK2206_60min_R1 2 SGDDLFPKDDK 11 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 77.593 0.0011398 22839000.0 4556.8 4834.4 4868.299999999999 4687.4 5999.8 4851.200000000001 4134.7 4855.1 6701.299999999999 6571.799999999999 6932.4 False True 5325.876436936247 5080.45031060807 5558.698144078474 5835.813210425382 5117.237367887001 5364.550764034059 4885.92146957631 5543.32529312016 5183.466249777128 5087.225815686675 5210.89375549334 1.0220658272530871 0.9749671647502396 1.0667456303860499 1.1199255798054317 0.9820268092191274 1.0294876494802323 0.9376359793222722 1.0637954932925602 0.9947365064414722 0.9762674225172421 1.0 12.347315124734665 SGDDLFPKDDK ddPTM_A549_PD325901_60min_R1 2 SGDDLFPKDDK 11 1 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 106.01 0.00016672 34957000.0 13123.400000000001 13026.6 13494.7 13450.9 16072.2 15005.0 14698.3 14540.5 15557.7 14770.1 15490.599999999999 False True 14455.677907063542 14124.397298856684 14410.531492223314 14281.73154378967 14943.344118079956 14882.804254891891 15257.651849718373 14250.478320698416 14903.863972359113 13837.513365318964 13585.35440300398 1.0640633639904984 1.0396782358311913 1.060740196003784 1.0512594018623254 1.099959829886786 1.0955035704921339 1.1230956070122555 1.0489588933761909 1.0970537484884153 1.018561088274534 1.0 13.729764581383694 -10.84915726132137 1.018064382354361 0.9985814371713111 1.076725105424706 0.5052026398582743 0.025112104103420525 0.3443898745868052 0.6143884091666272 0.01992390358558763 0.004517749541587368 1.4152812031153047e-11 10.84915726132137 0.07814366825339492 SGDDLFPKDDKGNAIGGK ddPTM_A549_MK2206_60min_R1 2 SGDDLFPKDDKGNAIGGK 18 2 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 78.661 0.00011744 35689000.0 7073.6 8813.3 9010.6 7746.9 10111.6 6617.4 6849.1 5639.200000000001 11605.0 12398.3 12556.0 False True 8267.450747083974 9261.85932535208 10288.438571376768 9644.89084777155 8624.197034755529 7317.648875725386 8093.492813813598 6438.5738693257 8976.486029376934 9597.515419006679 9437.998672029074 0.8759749852037811 0.9813372142974537 1.0901080757584867 1.021921191444499 0.9137739190740333 0.7753390448562295 0.8575433304308338 0.6821969458850826 0.9511005819464775 1.0169015436980677 1.0 13.20426525314286 -5.2364409509293 21.22791677098166 0.9441773730066714 0.8759743302973115 0.0018278048968486393 0.11391527291163142 3233.0266077204515 2745041.106562995 0.016470435122099936 1.0820489568362353 5.801750509568726e-06 5.2364409509293 -0.06820304270935984 SGDDLFPKDDKGNAIGGK ddPTM_A549_PD325901_60min_R1 2 SGDDLFPKDDKGNAIGGK 18 2 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 90.79299999999999 1.8703e-06 89902000.0 6747.1 7059.5 6691.700000000001 8130.7 8210.7 10169.3 8631.1 9271.5 8700.9 7703.5 8855.5 False True 7432.060625047502 7654.428840317407 7145.83900246102 8632.914872840527 7634.00875737728 10086.484592420667 8959.561233619144 9086.57265914896 8335.231431194798 7217.099695312467 7766.3296396396345 0.9569592033686014 0.9855915465201114 0.9201050346856761 1.1115823398452995 0.9829622371954206 1.2987453611212787 1.1536416363128874 1.1699957484125778 1.0732523364256221 0.9292806293562563 1.0 12.923017227986321 -6.260966819773758 24.998473301253252 1.072761946844796 0.9573558881460711 0.2652449310847712 0.0975620648376481 50.820563371643004 2688308.460145467 0.013680480994491704 0.033924511669810704 5.483188550425348e-07 6.260966819773758 -0.11540605869872489 SGDEGS(ph)EDEAPSGED ddPTM_A549_MK2206_60min_R1 2 SGDEGSEDEAPSGED 15 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.01)GDEGS(0.99)EDEAPSGED;S(0.027)GDEGS(0.973)EDEAPSGED 100.55 7.5089e-06 3004000.0 0.0 0.0 0.0 0.0 0.0 151.69 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 167.74173511632728 0.0 0.0 0.0 0.0 0.0 0.0 SGDEGS(ph)EDEAPSGED ddPTM_A549_PD325901_60min_R1 2 SGDEGSEDEAPSGED 15 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.006)GDEGS(0.994)EDEAPSGED;S(0.095)GDEGS(0.905)EDEAPSGED 99.844 8.6236e-06 6012800.0 219.75 589.32 404.94 353.43 435.07 497.55999999999995 557.38 341.68 398.90999999999997 551.6 548.54 True False 242.05885822860026 638.98406461872 432.42166350203485 375.2605684022318 404.5121841100189 493.5080363254919 578.5914009100389 334.86492435722533 382.1451999468926 516.7718818633549 481.0730574815567 0.5031644455330576 1.3282474557270696 0.8988690112179333 0.7800490228381133 0.8408539572506136 1.0258484208386829 1.2027100497770464 0.6960791487892946 0.7943600124842644 1.0742066591063808 1.0 8.91011219325601 -3.512839001068006 17.313820286306704 0.9102718083956348 0.47467076806286146 0.0 0.22471492733751006 0.0 0.0 0.026433833031866517 0.0 0.00030701599279249405 3.512839001068006 -0.43560104033277336 SGDET(ph)PGS(ph)EVPGDKAAEEQGDDQDSEK ddPTM_A549_PD325901_60min_R1 1 SGDETPGSEVPGDKAAEEQGDDQDSEK 27 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 2 S(0.134)GDET(0.883)PGS(0.983)EVPGDKAAEEQGDDQDSEK 47.96 0.0060768 4262400.0 575.17 247.97 595.87 578.35 474.81 374.71 364.0 619.99 492.96 454.76 587.13 True False 633.560834982225 268.86730215079075 636.3093214573946 614.0733659718496 441.46098360557613 371.6584859947044 377.85221918844286 607.623813077254 472.2426055145773 426.04637599017303 514.9167321237222 1.2304141533120647 0.5221568563947702 1.2357518832860623 1.192568288544763 0.8573444133089534 0.7217836648303044 0.7338122760742877 1.180042859689509 0.9171242184476317 0.827408296158852 1.0 9.008195340779606 -4.948557849445507 21.91862805887618 0.9471589435742722 5.030935032835006 0.13809105876826422 0.21336807202561245 914.6775976725063 443600.8826558446 0.02639947180377532 24250.930826818516 1.125750505257863e-05 4.948557849445507 4.083776089260734 SGDET(ph)PGSEVPGDK ddPTM_A549_MK2206_60min_R1 1 SGDETPGSEVPGDK 14 0 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 SGDET(0.5)PGS(0.5)EVPGDK 98.531 4.0653e-05 12439000.0 773.48 755.18 922.99 666.54 862.46 953.29 848.45 729.78 1057.3 909.91 1269.2 True False 904.0245142296019 793.6154363654226 1053.8838608966146 829.8423299221172 735.5932764938538 1054.1665150573115 1002.6023824853124 833.2285498575168 817.8232381611572 704.3606990400597 954.0226118620022 0.9475923348034517 0.8318622918344599 1.1046738806742844 0.8698350747709033 0.7710438592835535 1.1049701568392123 1.0509209844916518 0.8733844874297821 0.8572367446983048 0.7383060844494368 1.0 9.89787965059102 -7.2411676372000064 24.96100572597361 0.9467165528025958 0.9100774534726102 0.01360571340717398 0.12131985942080428 3242.6739938256287 3992769.914730376 0.016265585955370133 0.028146772576027136 5.738948966390296e-08 7.2411676372000064 -0.03663909932998566 SGDET(ph)PGSEVPGDK ddPTM_A549_PD325901_60min_R1 2 SGDETPGSEVPGDK 14 0 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.001)GDET(0.5)PGS(0.5)EVPGDK;SGDET(0.878)PGS(0.122)EVPGDK 132.86 7.8171e-09 26917000.0 2257.0 1930.13 2074.91 2706.6 2148.2 2005.75 1920.92 2109.7 2141.3999999999996 2019.99 2256.5 True False 2486.1289784844166 2092.7888288918234 2215.725870047432 2873.7805348654088 1997.317842887678 1989.4158370042921 1994.0216617677575 2067.6203784723675 2051.404404919093 1892.4474866663502 1978.9648051320462 1.2562775103615498 1.0575169520269374 1.1196388456739574 1.4521635389436125 1.009274059704365 1.0052810599992195 1.0076084509419594 1.0447989641404491 1.0366047943850185 0.9562815274726812 1.0 10.950530239688762 SGDET(ph)PGSEVPGDKAAEEQGDDQDSEK ddPTM_A549_PD325901_60min_R1 5 SGDETPGSEVPGDKAAEEQGDDQDSEK 27 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.021)GDET(0.833)PGS(0.146)EVPGDKAAEEQGDDQDSEK;S(0.079)GDET(0.821)PGS(0.099)EVPGDKAAEEQGDDQDSEK;SGDET(0.975)PGS(0.025)EVPGDKAAEEQGDDQDSEK;SGDET(0.873)PGS(0.127)EVPGDKAAEEQGDDQDSEK;S(0.001)GDET(0.662)PGS(0.335)EVPGDKAAEEQGDDQDS(0.002)EK 202.76 4.2018e-69 133077000.0 9261.08 8196.630000000001 8651.89 7962.44 9746.220000000001 9593.51 9607.079999999998 10063.45 9351.810000000001 10276.97 10655.27 True False 10201.258023953242 8887.38877617549 9239.05928344105 8454.261834786714 9061.679129833698 9515.383635278098 9972.68268659589 9862.726595126203 8958.785947495297 9628.080360321328 9344.739339321666 1.0916578465733588 0.9510579646430914 0.9886909573351153 0.9047081494517543 0.9697091380284005 1.0182610011644069 1.067197524133381 1.0554308940030999 0.9586983244998265 1.0303209121957413 1.0 13.18993870688691 -5.248962972123473 24.258646399438383 0.9863396001472765 1.091657946594143 0.2534656436855006 0.04612845644606083 1291.3834591874925 2510848.721509836 0.006375560138403459 0.15000567019935818 5.636857135290115e-06 5.248962972123473 0.10531834644686644 SGDETPGS(ph)EVPGDK ddPTM_A549_MK2206_60min_R1 1 SGDETPGSEVPGDK 14 0 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.001)GDET(0.021)PGS(0.979)EVPGDK 64.65 0.0050483 14025000.0 657.23 468.36 425.14 363.39 667.44 673.18 643.62 510.21 885.55 660.33 1067.5 True False 768.1543562692267 492.1975234726946 485.43124478226906 452.42056631319724 569.2604601524221 744.4154607792814 760.5574228477767 582.533829952594 684.9743389327654 511.1609943808977 802.4102884988079 0.9573087076267816 0.6133988191920172 0.6049663766032211 0.5638269757976432 0.7094381369628561 0.9277242221955724 0.9478410655360218 0.7259800108525896 0.853646007224374 0.6370319544845382 1.0 9.648196294068597 -7.20951629232175 4.814676324853227 0.9135638356307882 0.6708656452966697 0.15920121608492066 0.14327992988831523 0.14576184867721317 7.494556900020736 0.018075266576188593 0.03145211789420881 6.172821344501094e-08 7.20951629232175 -0.24269819033411855 SGDETPGS(ph)EVPGDKAAEEQGDDQDSEK ddPTM_A549_MK2206_60min_R1 2 SGDETPGSEVPGDKAAEEQGDDQDSEK 27 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 SGDET(0.077)PGS(0.923)EVPGDKAAEEQGDDQDSEK;S(0.009)GDET(0.396)PGS(0.595)EVPGDKAAEEQGDDQDSEK 132.96 8.672600000000001e-25 70235000.0 2738.5 3096.1000000000004 3128.7 2672.4 4056.5 3364.4 2971.4 2614.36 4534.1 4599.9 3904.4 True False 3200.691850103125 3253.678265487683 3572.396705909314 3327.1381199685948 3459.794223613056 3720.4185748920245 3511.2649175754073 2984.9535361417124 3507.1335894698796 3560.779395230703 2934.8297240419165 1.0905886034488763 1.1086429440296934 1.2172415580517308 1.1336733074198193 1.1788739207834336 1.2676778296248739 1.1964118016153968 1.0170789506761448 1.1950041124156847 1.2132831305547478 1.0 11.519061086666396 -10.924384081327863 0.7753786709091195 0.9804357996069486 1.160944048142884 0.0 0.09061619335193241 0.6647884176282779 0.5747087655941268 0.07983092081944525 0.012265125184571984 1.1901889632062402e-11 10.924384081327863 0.1805082485359355 SGDETPGSEVPGDKAAEEQGDDQDS(ph)EK ddPTM_A549_MK2206_60min_R1 1 SGDETPGSEVPGDKAAEEQGDDQDSEK 27 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 SGDET(0.119)PGS(0.015)EVPGDKAAEEQGDDQDS(0.866)EK 124.37 1.6949000000000003e-18 8199200.0 1597.8 1227.7 796.07 1011.4 1703.8 1568.7 1194.7 1263.4 2015.5 1225.1 1685.6 True False 1867.4695775405412 1290.1846860693206 908.9646964148783 1259.1930454034714 1453.1732770102115 1734.698792781216 1411.761525552716 1442.4908190002284 1558.9924680921326 948.3490591310976 1267.0189998066426 1.4739081085804808 1.0182836139522875 0.7174041561757114 0.9938233330326022 1.1469230352756963 1.3691182161008992 1.1142386387008896 1.138491860990533 1.2304412706755365 0.7484884277787653 1.0 10.307222443490689 -6.767901564667393 24.454581873039555 1.1360789849233246 1.0247103822485064 0.0 0.2194552987566383 267.2813533583605 1011469.2500119524 0.028033514945832238 0.05391125861917423 1.7064691261780066e-07 6.767901564667393 -0.11136860267481818 SGDETPGSEVPGDKAAEEQGDDQDS(ph)EKSKPAGSDGER ddPTM_A549_MK2206_60min_R1 1 SGDETPGSEVPGDKAAEEQGDDQDSEKSKPAGSDGER 37 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 SGDETPGSEVPGDKAAEEQGDDQDS(0.996)EKS(0.004)KPAGSDGER 228.49 4.5800999999999987e-128 48943000.0 1748.2 2032.5 2285.7 1726.0 2072.9 1885.2 1513.8 1600.6 2298.1 2986.7 3020.4 True False 2043.2534206135776 2135.945568490589 2609.846629813315 2148.870077483085 1767.9791559540251 2084.6906127055186 1788.8378650554125 1827.489951631919 1777.5840193115991 2312.0023956467626 2270.3513212007483 0.8999723529717583 0.9407995795826548 1.1495342616987636 0.9464923148310747 0.7787249221935275 0.9182237978935185 0.7879123589160325 0.8049370749657335 0.7829554847799797 1.0183456516430178 1.0 11.148699846555518 -6.527937404025818 24.976670653338626 0.8740533955859633 1.000645397474759 0.2508053892284311 0.09728215552864862 154.11181884570962 760913.0773229921 0.015165967243874598 0.03165736319993446 2.9652587490511583e-07 6.527937404025818 0.1265920018887956 SGDETPGSEVPGDKAAEEQGDDQDS(ph)EKSKPAGSDGER ddPTM_A549_PD325901_60min_R1 1 SGDETPGSEVPGDKAAEEQGDDQDSEKSKPAGSDGER 37 3 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 SGDETPGSEVPGDKAAEEQGDDQDS(0.996)EKS(0.004)KPAGSDGER 147.49 2.2167e-40 90139000.0 3343.0 2489.0 2979.5 3047.3 3824.7 2879.7 3433.9 4056.0 3462.4 3464.3 3559.8 True False 3682.378899013471 2698.756765146259 3181.7067871889976 3235.5248000795677 3556.0662664986985 2856.24867796149 3564.578943602181 3975.0998981295565 3316.887368820336 3245.563506778864 3121.9671674314486 1.1795059657988307 0.8644411104959251 1.0191352492046541 1.0363737433989566 1.1390466573754516 0.9148874811234564 1.1417733603312954 1.2732676818635509 1.0624350580692543 1.039589250212744 1.0 11.608239649770061 -6.3085414901331855 4.161390624749504 1.0558326549049102 1.004934994621905 0.020307113331772264 0.11096043008792279 0.676356067013564 25.29465997763111 0.0155918897882232 0.03899685153222545 4.914264297477987e-07 6.3085414901331855 -0.05089766028300513 SGDGEGT(ph)PVEHVR ddPTM_A549_MK2206_60min_R1 4 SGDGEGTPVEHVR 13 0 Q7L576-2;Q7L576;Q7L576-3 Q7L576-2 CYFIP1 Cytoplasmic FMR1-interacting protein 1 1 S(0.011)GDGEGT(0.989)PVEHVR;S(0.004)GDGEGT(0.996)PVEHVR;S(0.003)GDGEGT(0.997)PVEHVR;SGDGEGT(1)PVEHVR 78.932 0.00071303 12627800.0 800.373 1054.33 788.31 863.92 1345.1 885.47 574.79 837.52 1369.56 1303.59 1170.3 True False 935.4563951588779 1107.990893592464 900.104211728632 1075.580438782843 1147.2375718431956 979.1698476725838 679.2219027977276 956.2410247974287 1059.356846737912 1009.1081136174253 879.6822113631429 1.0634026504972838 1.2595354086739317 1.0232152021510625 1.222692041386331 1.3041500180678347 1.1130949734169073 0.7721219026871251 1.0870300802327826 1.2042494812943279 1.147128020303748 1.0 9.780838628419101 -7.515900101385479 24.795535937706425 1.070134655000673 1.1770836885929836 0.1819925088497274 0.12776179551215752 501.7505343740766 1782749.5191534697 0.020977716473657655 0.03181186227206226 3.04859616249827e-08 7.515900101385479 0.10694903359231067 SGDGEGT(ph)PVEHVR ddPTM_A549_PD325901_60min_R1 3 SGDGEGTPVEHVR 13 0 Q7L576-2;Q7L576;Q7L576-3 Q7L576-2 CYFIP1 Cytoplasmic FMR1-interacting protein 1 1 S(0.004)GDGEGT(0.996)PVEHVR;S(0.001)GDGEGT(0.999)PVEHVR;S(0.001)GDGEGT(0.999)PVEHVR 69.729 0.00027415 7320300.0 665.3 605.4399999999999 436.99 843.1099999999999 579.72 388.45 627.83 688.65 736.6 673.1899999999999 606.64 True False 732.8407662320259 656.462553591865 466.64676923434115 895.1869898582629 539.0024671254287 385.28659199018676 651.7224142117583 674.9143355145256 705.6432635955008 630.6846685126758 532.0271258078014 1.377450003360862 1.2338892544156042 0.877110858822865 1.6825965189257202 1.0131108753280882 0.7241859922183258 1.2249796722718187 1.2685712866421461 1.3263294846556741 1.1854370537123986 1.0 9.055355994280763 -11.084388567660017 1.4360586233444856 1.0008814395937269 1.2008992888048442 0.00252274393177343 0.24925988441576077 0.8982645002699537 3.3327770656045375 0.1695111465576849 0.0379502080125016 8.234010800818725e-12 11.084388567660017 0.20001784921111732 SGDLGDMEPLKGT(ph)TPLMQK ddPTM_A549_MK2206_60min_R1 1 SGDLGDMEPLKGTTPLMQK 19 1 O60716-3;O60716-5;A0A669KB05;O60716-13;O60716-11;O60716-19;O60716-21;O60716-27;O60716-29;O60716-8;O60716-7;A0A669KB62;O60716-15;O60716-16;O60716-23;O60716-24;O60716-31;O60716-32 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 SGDLGDMEPLKGT(0.5)T(0.5)PLMQK 47.568000000000005 0.005614899999999999 3952500.0 1312.2 1814.8 1459.5 1741.7 2512.0 1644.5 1821.4 1634.1 2841.9 2376.6 2614.1 True False 1533.6672797901474 1907.1655683624697 1666.4790463370239 2168.416578187885 2142.4881276262795 1818.5198984692486 2152.3248034165217 1865.7386792213658 2198.2141875817583 1839.724409379615 1964.9468245102898 0.7805133760667405 0.9705939848208256 0.8481038904207238 1.1035497506291574 1.0903542533066954 0.925480463789378 1.095360330655732 0.9495110279568767 1.1187143388114862 0.9362718555185924 1.0 10.940274555388545 -4.814062442934471 0.6824314322670131 1.0486151123101928 0.4647485849899915 0.3755726532484476 0.08367921358751139 3.0454634427791762 0.6454140624680806 0.01252506724052535 1.584051685384013 1.5343963511701124e-05 4.814062442934471 -0.5838665273202013 SGDLGDMEPLKGT(ph)TPLMQK ddPTM_A549_PD325901_60min_R1 3 SGDLGDMEPLKGTTPLMQK 19 1 O60716-3;O60716-5;A0A669KB05;O60716-13;O60716-11;O60716-19;O60716-21;O60716-27;O60716-29;O60716-8;O60716-7;A0A669KB62;O60716-15;O60716-16;O60716-23;O60716-24;O60716-31;O60716-32 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 SGDLGDMEPLKGT(0.5)T(0.5)PLMQK;SGDLGDMEPLKGT(0.5)T(0.5)PLMQK;SGDLGDMEPLKGT(0.553)T(0.446)PLMQK 81.317 5.5397e-05 55991700.0 11087.6 12041.0 11864.7 12249.7 13887.0 11935.400000000001 13348.099999999999 14246.7 13149.0 13116.0 13740.0 True False 12213.20498974029 13055.73732789317 12669.909890237057 13006.336147912803 12911.62502754921 11838.202059569263 13856.069249860586 13962.53839218006 12596.393256879215 12287.853521609442 12050.067105036265 1.0135383382749663 1.0834576450148223 1.0514389488289018 1.0793579848594261 1.0714981846161553 0.9824179364629053 1.1498748620303958 1.1587104262966708 1.045338017380386 1.0197332026867962 1.0 13.556753560181738 -9.516310518496127 1.6411756555808448 1.012164063529536 1.0727159904210757 0.18677560755225797 0.04906554163473339 0.3720570089205866 2.0344253450166376 0.011582038959643484 0.009317968184653486 3.045716538040652e-10 9.516310518496127 0.060551926891539765 SGDLGDMEPLKGTT(ph)PLMQK ddPTM_A549_MK2206_60min_R1 2 SGDLGDMEPLKGTTPLMQK 19 1 O60716-3;O60716-5;A0A669KB05;O60716-13;O60716-11;O60716-19;O60716-21;O60716-27;O60716-29;O60716-8;O60716-7;A0A669KB62;O60716-15;O60716-16;O60716-23;O60716-24;O60716-31;O60716-32 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 SGDLGDMEPLKGT(0.148)T(0.852)PLMQK;SGDLGDMEPLKGT(0.039)T(0.961)PLMQK 126.61 1.1902999999999998e-15 9381600.0 3978.0 4369.1 4238.5 4351.0 5861.1 5151.3 5006.1 5362.5 7484.2 6462.5 5770.0 True False 4649.389147237622 4591.468528065056 4839.583033846848 5416.99519532381 4998.939954152221 5696.4071468438015 5915.643569992005 6122.650796967492 5789.040649811529 5002.616761598823 4337.149756101288 1.0719918399628905 1.058637304742822 1.1158441156058219 1.248975825126501 1.1525864300903972 1.3133987681265507 1.3639472701329183 1.411676133238067 1.3347569199490499 1.1534341774944221 1.0 12.082531543093591 -6.0683410809297715 3.9572686104392565 1.2094998677230744 1.0680204782161182 0.2569370975491043 0.11415559708002136 0.3774157265402904 11.42945700899787 0.022244504775000673 0.0656514271365493 8.543954346011684e-07 6.0683410809297715 -0.14147938950695615 SGDLGDMEPLKGTT(ph)PLMQK ddPTM_A549_PD325901_60min_R1 1 SGDLGDMEPLKGTTPLMQK 19 1 O60716-3;O60716-5;A0A669KB05;O60716-13;O60716-11;O60716-19;O60716-21;O60716-27;O60716-29;O60716-8;O60716-7;A0A669KB62;O60716-15;O60716-16;O60716-23;O60716-24;O60716-31;O60716-32 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 SGDLGDMEPLKGT(0.158)T(0.842)PLMQK 107.47 4.739200000000001e-10 6831000.0 3408.4 3137.5 3262.3 2929.6 4287.9 3908.8 3726.9 3741.6 3584.7 3833.7 3887.1 True False 3754.4182588685376 3401.908136057209 3483.699295803548 3110.5547383956628 3986.7326964519475 3876.968028758512 3868.7292189379314 3666.970852771581 3434.047525130043 3591.639527736663 3409.011342357091 1.1013217269827626 0.9979163441870597 1.0219089776905275 0.9124506861408485 1.169468885866306 1.1372704985128803 1.1348537245590324 1.0756698891579894 1.0073441183553355 1.0535721847300448 1.0 11.735137684238246 -8.774474454155058 12.726235465558815 1.0034622190897087 1.0675492275396843 0.07277657368183765 0.07039529952912058 1.049257389548342 1018.1301074141348 0.012465953333942962 0.01341789567973431 1.680836792111668e-09 8.774474454155058 0.06408700844997561 SGDNLAEENS(ph)RDENR ddPTM_A549_MK2206_60min_R1 2 SGDNLAEENSRDENR 15 1 Q9H4L5-5;Q9H4L5;Q9H4L5-6;Q9H4L5-2 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 SGDNLAEENS(1)RDENR;SGDNLAEENS(1)RDENR 70.942 0.00046939 13593000.0 293.4 345.96000000000004 180.45 385.22 418.26 344.65999999999997 303.16999999999996 260.13 431.92 481.77 572.99 True False 342.9187470587024 363.5678862853649 206.04052340631435 479.598917293183 356.7345080656717 381.131692433208 358.2520647039567 297.0042241147139 334.09080963450964 372.93782239620344 430.70076928049855 0.7961879140164081 0.8441310353188327 0.4783843867994771 1.1135316012886873 0.828265314365725 0.884910637772722 0.8317887736825498 0.6895836861653867 0.7756912303468151 0.8658861302226364 1.0 8.75054209017402 -10.717271138941902 0.9691167395385162 1.000282828411691 0.8053759941784995 0.07620520104968542 0.148107672666328 0.7007725499649798 1.1678790168384217 0.093910127785757 0.024287041255458094 1.91747125031789e-11 10.717271138941902 -0.19490683423319144 SGDNLAEENS(ph)RDENR ddPTM_A549_PD325901_60min_R1 2 SGDNLAEENSRDENR 15 1 Q9H4L5-5;Q9H4L5;Q9H4L5-6;Q9H4L5-2 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 SGDNLAEENS(1)RDENR;SGDNLAEENS(1)RDENR 125.12 4.9423000000000005e-08 15891300.0 1133.33 890.98 1115.45 952.17 1277.2199999999998 1258.42 1235.79 1335.48 957.8199999999999 1318.13 1490.54 True False 1248.3848272865507 966.0660114945823 1191.1511447457515 1010.9833783650313 1187.512473369798 1248.171844747822 1282.8186647002349 1308.842803736208 917.5661563087727 1234.9030468465276 1307.2130293115542 0.9549972340346198 0.7390272203784279 0.9112142535582537 0.7733883886526646 0.9084307199685757 0.9548343053199015 0.9813386463687814 1.0012467550338846 0.70192549778364 0.9446838573028079 1.0 10.35227855302384 SGEIKGNGS(ph)GGSRENSTVDFSK ddPTM_A549_MK2206_60min_R1 2 SGEIKGNGSGGSRENSTVDFSK 22 2 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 S(0.126)GEIKGNGS(0.435)GGS(0.435)RENS(0.002)T(0.002)VDFS(0.001)K;S(0.007)GEIKGNGS(0.49)GGS(0.49)RENS(0.006)T(0.007)VDFSK 45.611000000000004 0.008409100000000001 7597900.0 1853.0900000000001 2473.3 2314.8999999999996 2059.67 2911.0 1930.7 1979.9299999999998 1507.8 4168.200000000001 3482.2 4359.8 True False 2165.846288299288 2599.180405681561 2643.187628890423 2564.2892424621004 2482.795756178381 2135.005392505063 2339.6576523709623 1721.5352674438386 3224.1093552476464 2695.5686015070687 3277.141335641315 0.66089498940559 0.7931242932410537 0.8065528331487628 0.7824774642990141 0.7576102163114409 0.6514840752473242 0.7139324834499721 0.5253161493893719 0.9838176096291891 0.8225365724055852 1.0 11.678222179035528 -8.839810230579959 10.835868764795256 0.992643868622826 0.7193817376197569 0.5154838849455747 0.09207012819661821 0.16262893169031814 21.54989833074557 0.013365205327476154 0.014219995047109031 1.446071508463804e-09 8.839810230579959 -0.2732621310030692 SGEIKGNGS(ph)GGSRENSTVDFSK ddPTM_A549_PD325901_60min_R1 2 SGEIKGNGSGGSRENSTVDFSK 22 2 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-11;Q9Y6M7-8;C9JRP1;Q9Y6M7-3;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 S(0.048)GEIKGNGS(0.392)GGS(0.392)RENS(0.034)T(0.133)VDFS(0.002)K;S(0.017)GEIKGNGS(0.488)GGS(0.488)RENS(0.004)T(0.004)VDFSK 47.099 0.0046405000000000005 18203100.0 2286.07 2002.5 2870.9 3518.4 2752.3 5215.2 3844.8999999999996 4498.5 3596.4 3572.4 3672.3 True False 2518.150143484215 2171.257702774361 3065.7365381241448 3735.7235771338387 2558.9879429195403 5172.72914029405 3991.2197735100094 4408.7738884950195 3445.2558148178887 3346.8380543304033 3220.630380627704 0.7818811368827194 0.6741716515607049 0.9519057376359437 1.1599355205752429 0.7945612009102364 1.6061231898600794 1.239266634730098 1.3689164441266137 1.0697457974504994 1.0391872580168922 1.0 11.65312738231741 -5.952914676515593 3.5476996130576857 1.1026147750502509 0.7295019963088134 0.3793337909827854 0.2054705185443236 0.20328471312326546 5.288371178146432 0.029457184738035436 0.10060052257498843 1.1145134745092856e-06 5.952914676515593 -0.37311277874143745 SGEISLPIKEEPS(ph)PISK ddPTM_A549_MK2206_60min_R1 2 SGEISLPIKEEPSPISK 17 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2A0 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 SGEISLPIKEEPS(0.999)PIS(0.001)K;SGEISLPIKEEPS(0.932)PIS(0.068)K 147.35 5.3406999999999993e-17 53992000.0 6346.3 7401.0 6404.4 6150.3 9220.2 6538.4 6222.0 6349.299999999999 7754.4 8215.8 9223.7 True False 7417.400287861772 7777.679287773107 7312.640222241065 7657.123776097456 7863.9207939250855 7230.289148161347 7352.456861127479 7249.3327189157435 5998.040781232268 6359.845073879087 6933.200728830402 1.0698378105537776 1.121802121699881 1.0547278967177216 1.1044139749562936 1.134241038374161 1.0428501107858537 1.060470791009076 1.0455968321774916 0.8651185817093903 0.9173028912076461 1.0 12.759305814451164 -8.597929842541399 5.817301777243613 0.9364940468667942 1.083409370023603 0.7478045593454695 0.03962220872480498 0.09943624395478791 5.827500996336424 0.009119479295929694 0.0103572747137838 2.523888457371556e-09 8.597929842541399 0.14691532315680877 SGEISLPIKEEPS(ph)PISK ddPTM_A549_PD325901_60min_R1 2 SGEISLPIKEEPSPISK 17 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2A0 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 SGEISLPIKEEPS(0.999)PIS(0.001)K;SGEISLPIKEEPS(1)PISK 201.29 7.494899999999999e-49 75401000.0 18116.8 19084.2 19193.2 19630.9 20497.4 21499.3 19749.7 21766.0 21493.4 24293.9 26477.8 True False 19956.004199116735 20692.492510005726 20495.765970087552 20843.45610799133 19057.73333619119 21324.21682887019 20501.28564095053 21331.86005490333 20590.10714331188 22759.979007977086 23221.19845660328 0.8593873497275055 0.8911035556014345 0.8826317043192612 0.8976046670004749 0.8207041239411935 0.9183081945026116 0.882869403974311 0.9186373431487258 0.8866944219865099 0.9801379997897981 1.0 14.503154811820977 -11.382316360587648 0.3529295606979648 1.076786048318744 0.8753988979745765 0.7298101063826493 0.025157694260982678 1.4873458188005413 0.16374198834794781 0.12106756041056602 0.007925264224176014 4.146518806029277e-12 11.382316360587648 -0.20138715034416743 SGELTALEFS(ph)ASPGLRR ddPTM_A549_PD325901_60min_R1 1 SGELTALEFSASPGLRR 17 1 A0A2R8YFR7;A0A2R8YF49;Q12774;H0Y895;Q12774-2 A0A2R8YFR7 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 SGELTALEFS(0.5)AS(0.5)PGLRR 44.806999999999995 0.019518 1323400.0 656.44 715.53 517.21 507.34 773.28 683.16 598.52 636.3 829.01 916.18 834.97 True False 723.0813055544132 775.8302242527536 552.3109808363891 538.6772395472605 718.9674804711774 677.5965714609761 621.2970061227109 623.6084973323061 794.1695926599318 858.3322384437429 732.2739833109265 0.9874463957944413 1.059480798081738 0.7542408899182148 0.7356225290316452 0.9818285189109346 0.9253320299558776 0.8484488323804147 0.8516054257625038 1.0845252060835873 1.1721462977052013 1.0 9.516239729551767 -8.760274341258299 24.999096582971234 1.039914683917877 0.8912323233549301 0.39481210702453906 0.10197390227839473 27.168747085170104 582979.3840098345 0.01700167432394714 0.018756405617325556 1.7367034168840006e-09 8.760274341258299 -0.14868236056294692 SGEQAEGS(ph)PGGPGDSQGR ddPTM_A549_MK2206_60min_R1 4 SGEQAEGSPGGPGDSQGR 18 0 P38936 P38936 CDKN1A Cyclin-dependent kinase inhibitor 1 1 S(0.002)GEQAEGS(0.998)PGGPGDSQGR;S(0.007)GEQAEGS(0.992)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR 89.04899999999999 6.6495000000000005e-06 78693000.0 1221.7800000000002 1354.81 1176.8400000000001 1252.84 1665.8799999999997 940.9499999999999 1210.34 785.09 1701.23 1628.86 1939.13 True False 1427.986594346903 1423.7640421386147 1343.7336080104574 1559.7858562421243 1420.8312587778912 1040.5207044479407 1430.2431111052767 896.378911737288 1315.9041213060668 1260.8993947075999 1457.5905037346074 0.9796898310521002 0.9767928910696638 0.9218869116995285 1.0701125262861373 0.9747808147332653 0.7138635314801659 0.9812379453905182 0.6149730733293096 0.9027941098233594 0.8650573610880081 1.0 10.5093697497245 -7.029471289094206 24.96186916790033 0.9093074640959948 0.9868137942422521 0.1583285347299047 0.11737122079568814 1417.1569854679906 1200315.10220684 0.018274772539132574 0.031687892531793244 9.343911381630239e-08 7.029471289094206 0.0775063301462573 SGEQAEGS(ph)PGGPGDSQGR ddPTM_A549_PD325901_60min_R1 3 SGEQAEGSPGGPGDSQGR 18 0 P38936 P38936 CDKN1A Cyclin-dependent kinase inhibitor 1 1 SGEQAEGS(1)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR 143.39 1.0705e-16 67584000.0 1082.64 1269.96 1094.99 916.71 1694.51 1431.22 1143.6599999999999 857.23 1303.2 1548.24 1221.64 True False 1192.5488158025557 1376.9839861250082 1169.3026061097767 973.3330947005353 1575.4934633421478 1419.564618839479 1187.1826071347646 840.1318751660745 1248.4310360000768 1450.4838621757083 1071.38602461401 1.1130897626111906 1.28523609090486 1.0913924386227114 0.908480297800412 1.4705189606236961 1.3249795930004853 1.1080811022922132 0.7841542225350103 1.1652485727073498 1.3538386994531466 1.0 10.065262667135654 -14.999999915521263 0.1433049446066215 0.4824112200431494 1.2028932505924876 0.0 0.20422226088139364 128.62391824643916 1.2299322788696725 19.047844694622963 0.4013991761096009 1.0000001945194991e-15 14.999999915521263 0.7204820305493382 SGERPVTAGEEDEQVPDS(ph)IDAR ddPTM_A549_MK2206_60min_R1 1 SGERPVTAGEEDEQVPDSIDAR 22 1 H3BNV7;Q9Y3D0 H3BNV7 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 1 SGERPVTAGEEDEQVPDS(1)IDAR 62.7 0.00035727 1647200.0 359.67 585.01 341.1 307.12 853.81 355.21 224.93 448.31 798.05 597.86 717.32 True False 420.3735029127589 614.78451022026 389.4731090822599 382.3644137871405 728.2156800352676 392.79808643068503 265.7968694589208 511.859315391794 617.2929492239773 462.8030107681972 539.1896469751428 0.7796394186554895 1.1402008804679484 0.7223304662231674 0.7091464310047628 1.3505743000084702 0.7284970856437707 0.4929561814660999 0.9493122100235565 1.1448531192818605 0.8583306696716544 1.0 9.074648985254038 -8.526468875096418 23.583371249349312 1.0672807932042805 0.8522518758856367 0.06511498453120668 0.22813157025739433 70.59506209851791 463729.19257608 0.036869298910973264 0.04192323671952591 2.9753024844420146e-09 8.526468875096418 -0.21502891731864382 SGERPVTAGEEDEQVPDS(ph)IDAR ddPTM_A549_PD325901_60min_R1 1 SGERPVTAGEEDEQVPDSIDAR 22 1 H3BNV7;Q9Y3D0 H3BNV7 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 1 SGERPVTAGEEDEQVPDS(1)IDAR 85.37100000000001 7.1245e-06 1863400.0 259.64 441.64 437.03 463.44 536.81 397.58 363.84 336.05 588.09 353.38 492.09 True False 285.99846166313415 478.85855273571485 466.68948387488075 492.06563625139444 499.1063174939648 394.34224029722907 377.68613030088744 329.34721912387505 563.3746224380637 331.0675264917918 431.5660496155236 0.6626991671794534 1.1095834650624707 1.0813859994099355 1.140186158502897 1.1565004196660325 0.9137471324459913 0.8751525534442827 0.7631444118861669 1.305419235224751 0.7671306090614297 1.0 8.753437565309996 -8.77353469585791 24.984177512539144 1.1442257230524888 0.9794584328857483 0.0 0.1990454921747213 320.2089943192496 661424.0123093913 0.03192578099733293 0.03411137328615671 1.6844778481847829e-09 8.77353469585791 -0.16476729016674052 SGETDPGRKS(ph)PSRPILDGK ddPTM_A549_MK2206_60min_R1 4 SGETDPGRKSPSRPILDGK 19 3 O60890 O60890 OPHN1 Oligophrenin-1 1 S(0.014)GET(0.013)DPGRKS(0.958)PS(0.014)RPILDGK;S(0.014)GET(0.013)DPGRKS(0.947)PS(0.025)RPILDGK;S(0.002)GET(0.014)DPGRKS(0.969)PS(0.015)RPILDGK;S(0.003)GET(0.006)DPGRKS(0.966)PS(0.025)RPILDGK 68.369 0.00025314 37086000.0 5145.7 4984.58 4871.82 4768.15 6790.3 6096.1 5422.0 5749.8 7764.6 7310.499999999999 7249.6 True False 6014.168359713586 5238.273831137422 5562.717333008312 5936.3469640503845 5791.45586505602 6741.18525573632 6407.10721649521 6564.851758024 6005.930497518318 5659.052972637246 5449.324241218695 1.1036539749685677 0.9612703519300821 1.0208086520034745 1.0893730490742044 1.062784229510412 1.2370681129131549 1.1757617885960692 1.2047093304464165 1.1021422531787433 1.0384871081504314 1.0 12.411861620186771 -4.914455179753947 20.515853380887805 1.0749896486792279 2.7360670378136054 0.0 0.08375739295292817 3811.8838442800175 962601.8075128568 0.012625503629729444 15566.209979485036 1.2177126572664978e-05 4.914455179753947 1.6610773891343775 SGETDPGRKS(ph)PSRPILDGK ddPTM_A549_PD325901_60min_R1 3 SGETDPGRKSPSRPILDGK 19 3 O60890 O60890 OPHN1 Oligophrenin-1 1 S(0.018)GET(0.017)DPGRKS(0.948)PS(0.018)RPILDGK;S(0.017)GET(0.016)DPGRKS(0.949)PS(0.017)RPILDGK;S(0.015)GET(0.051)DPGRKS(0.917)PS(0.016)RPILDGK 52.169 0.0026019000000000003 22506300.0 3991.9 3630.54 4017.47 3603.62 4739.0 4013.0000000000005 3797.7999999999997 4002.38 4528.3 4230.8 4364.7 True False 4397.154749318541 3936.4983471812398 4290.119673209659 3826.207422985177 4406.148988662464 3980.3194585059077 3942.327357235901 3922.5493910936293 4337.991298587433 3963.6665659671535 3827.869570112938 1.148721153837226 1.028378390401922 1.1207591049355117 0.9995657774912868 1.151070826201757 1.0398263017066363 1.029901172186383 1.024734338317044 1.1332651803126732 1.0354758680688823 1.0 11.902325957287214 -5.2466381909643065 23.649264825834546 1.0616771648000332 1.1487212849418333 0.2054336225589679 0.051271033630145214 1763.630978839725 2817819.7571974266 0.007726581991415331 0.22070084599279405 5.667112173306566e-06 5.2466381909643065 0.08704412014180019 SGEVAEGEARS(ph)PSHK ddPTM_A549_MK2206_60min_R1 4 SGEVAEGEARSPSHK 15 1 O00257 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 SGEVAEGEARS(0.959)PS(0.041)HK;SGEVAEGEARS(0.965)PS(0.035)HK;SGEVAEGEARS(0.993)PS(0.007)HK;SGEVAEGEARS(0.916)PS(0.084)HK 153.36 4.0641e-15 227309000.0 16228.7 16190.7 15288.099999999999 13866.599999999999 17411.5 11497.800000000001 13281.000000000002 10825.599999999999 19462.4 23127.5 24244.0 True False 18967.707806378887 17014.737473928948 17456.18246543683 17263.917622495326 14850.291414874571 12714.489564378053 15693.985787951482 12360.161952009557 15054.197475066409 17902.98168725366 18223.54569963944 1.040835198539556 0.9336677809228745 0.9578916613237459 0.947341308164684 0.8148958309012494 0.6976957049927783 0.8611927693227117 0.6782523091680291 0.8260849849524213 0.9824093500974336 1.0 14.1535160667692 -6.602682719468171 6.59138189616354 0.8705182277868324 0.9698324835041044 0.2583623465250158 0.09899144805880533 0.34168327453189584 22.841748616364352 0.016790178405165657 0.035199677354647456 2.4964178574715497e-07 6.602682719468171 0.09931425571727204 SGEVAEGEARS(ph)PSHK ddPTM_A549_PD325901_60min_R1 2 SGEVAEGEARSPSHK 15 1 O00257 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 S(0.001)GEVAEGEARS(0.96)PS(0.039)HK;SGEVAEGEARS(0.992)PS(0.008)HK 90.22 9.0857e-06 167814000.0 20912.3 20319.1 19773.2 22155.0 25943.0 24825.0 21883.0 25899.0 23880.0 24388.0 24932.0 True False 23035.301301178417 22031.46186688766 21115.128257910896 23523.464032344298 24120.853178491332 24622.83343070252 22715.76953983707 25382.424127627546 22876.406644936942 22848.137517917876 21865.52205696973 1.0534988024141785 1.007589108070943 0.9656814140040327 1.0758244861958872 1.103145541901329 1.1261031575897766 1.0388853044831061 1.1608423554440945 1.0462318981149132 1.0449390349971055 1.0 14.41637017388716 -4.874939014751067 18.418307337786565 1.0423933116321933 3.291632011366992 0.0 0.05622418925969604 3386.8175786762436 463514.8419685258 0.008182655823531953 22736.896967025943 1.3337087033586604e-05 4.874939014751067 2.249238699734799 SGEVLVNVK ddPTM_A549_PD325901_60min_R1 1 SGEVLVNVK 9 0 Q13347 Q13347 EIF3I Eukaryotic translation initiation factor 3 subunit I 0 80.438 0.004634 1011500.0 1449.3 1751.1 1704.9 2296.9 2102.8 2287.9 1690.8 1928.9 2232.3 1934.3 2257.1 False True 1596.4318690817306 1898.6713424859847 1820.60476639655 2438.7742963616192 1955.1065822661822 2269.2681009508287 1755.1443192412612 1890.4265763072237 2138.4841940323604 1812.167967890296 1979.4910089357595 0.8064860420558443 0.9591714910121132 0.919733789230681 1.2320209010056509 0.9876814663165926 1.1463896985169248 0.8866644563265207 0.9550063969846371 1.0803202360500141 0.9154716842409797 1.0 10.95091379916662 -5.4140249951509105 1.5947889252965959 1.0352863377013874 0.7716359150009816 0.2584949480415192 0.09998999191523228 0.6439846069438645 1.9157711258507184 0.012621419564607307 0.2389499599730437 3.854561726902241e-06 5.4140249951509105 -0.26365042270040584 SGFGEISS(ph)PVIR ddPTM_A549_MK2206_60min_R1 2 SGFGEISSPVIR 12 0 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 SGFGEIS(0.017)S(0.983)PVIR;SGFGEIS(0.195)S(0.805)PVIR 164.81 2.2158e-14 75807000.0 4055.0 4973.799999999999 4329.9 3819.9 6282.700000000001 4877.6 5043.9 4744.1 6796.200000000001 6607.6 6652.0 True False 4739.3848647683635 5226.94517518253 4943.944928218347 4755.775671481825 5358.523152642362 5393.744394511161 5960.3113407008805 5416.590703196923 5256.871551301292 5114.938570822495 5000.124814139645 0.9478533118545469 1.0453629398213158 0.9887643032905039 0.9511313913671043 1.071677878417998 1.0787219509517871 1.1920325116377022 1.0832910986300923 1.0513480656394023 1.0229621781356684 1.0 12.287748392848014 -6.769817583967288 24.997088347362972 1.0491438671532372 0.9881045038134353 0.33391023048644386 0.054219623303302024 250.41572980111735 747138.3306808167 0.00912552879997396 0.017449447602364634 1.6989571129161818e-07 6.769817583967288 -0.061039363339801866 SGFGEISS(ph)PVIR ddPTM_A549_PD325901_60min_R1 4 SGFGEISSPVIR 12 0 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 SGFGEIS(0.023)S(0.977)PVIR;SGFGEIS(0.023)S(0.977)PVIR;SGFGEIS(0.056)S(0.944)PVIR;SGFGEIS(0.048)S(0.952)PVIR 188.29 1.9699e-19 117592100.0 10963.5 11744.6 11150.0 11111.2 13132.7 12650.5 12059.599999999999 11696.5 11278.8 11561.0 13151.1 True False 12076.506449097878 12734.358659677286 11906.706050396822 11797.513588633901 12210.304457355467 12547.478522259904 12518.534677266332 11463.204131773255 10804.791259083535 10831.036486987397 11533.59807169159 1.0470719002024893 1.1041097999533103 1.032349660217569 1.0228823230445383 1.0586726172923266 1.0879066917596871 1.085397167427934 0.9938966192960104 0.936810108339317 0.9390856539011377 1.0 13.493555032210507 -8.402072561774862 4.7323549236316165 0.9699592709328498 1.0620932217220633 0.7306201812304982 0.028078483862964656 0.10650258795056676 3.69748550741687 0.00530546264936315 0.0064199969313105155 3.962118297866317e-09 8.402072561774862 0.09213395078921349 SGGGGYS(ph)SR ddPTM_A549_PD325901_60min_R1 1 SGGGGYSSR 9 0 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.266)GGGGY(0.012)S(0.488)S(0.233)R 55.235 0.018096 16423000.0 1505.4 1644.1 1737.4 1720.6 1802.0 1210.2 1114.5 1683.8 1357.8 1838.0 1647.7 True False 1658.2270997830935 1782.654076969452 1855.310411834927 1826.8775542338806 1675.4337365625154 1200.3445324405309 1156.9129073778015 1650.2152880844537 1300.7363878766912 1721.9483663249584 1445.0433456308765 1.147527584412456 1.2336336362222973 1.2839133285824975 1.2642372007438316 1.159434934341748 0.8306633403557074 0.8006077539997368 1.141983244360053 0.9001365888500847 1.1916240239653093 1.0 10.496897053228045 -7.091661494374929 5.114789220558081 0.9475959394072827 1.233804684443232 0.5113311369032376 0.1163609084831778 0.09750996265325416 4.142002153434564 0.013552088777788561 0.023913991078695792 8.097267851091454e-08 7.091661494374929 0.2862087450359493 SGGGGYS(ph)SRR ddPTM_A549_MK2206_60min_R1 1 SGGGGYSSRR 10 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 SGGGGY(0.005)S(0.498)S(0.498)RR 44.61600000000001 0.022914 5719100.0 884.75 891.45 901.61 887.37 1349.1 958.58 783.29 640.25 1312.2 1095.8 1207.3 True False 1034.0741699392881 936.8209973091931 1029.4718554079636 1104.775689835553 1150.6491771419637 1060.0162993460942 925.6036539300134 731.0073981833913 1014.9887951528139 848.2580189338473 907.4940902150929 1.139483089850418 1.0323163615171853 1.1344116358531433 1.2173916081081044 1.2679412346026833 1.168069644502975 1.019955572063977 0.805523039836137 1.118452236875992 0.9347256671751928 1.0 9.82574443779205 -7.7601910296547345 24.9948311628526 1.03213861221361 1.1604955379112487 0.42930537880153385 0.09623180603966291 34.7759313639032 696282.14148041 0.01576812734284123 0.022683180455638195 1.7370366042288742e-08 7.7601910296547345 0.12835692569763868 SGGGLHSVAEGVRLS(ph)PEPGR ddPTM_A549_MK2206_60min_R1 4 SGGGLHSVAEGVRLSPEPGR 20 1 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHS(0.002)VAEGVRLS(0.998)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR 160.15 2.8214999999999996e-27 103566000.0 7943.63 9782.1 8173.8 6835.219999999999 12449.5 8745.7 8758.2 8456.71 13167.2 12995.0 14246.5 True False 9284.320540892704 10279.967107272716 9332.967748509458 8509.849206844681 10618.195041752932 9671.164169074185 10349.45157202294 9655.474540088191 10184.850223697713 10059.42047458054 10708.7008666026 0.8669885036986948 0.959963980255814 0.871531277674992 0.7946668146632508 0.9915483842552807 0.903112738841721 0.9664525791639155 0.9016476097675749 0.9510817745840088 0.93936889263132 1.0 13.38649584871386 -8.97898180937059 0.2696378284561859 1.0159806487626124 0.8771751845462995 0.19652941804459778 0.0527133250565547 1.3408417916736792 0.3196481742575884 0.06816879556918719 0.051288818360675885 1.0495863901531169e-09 8.97898180937059 -0.1388054642163129 SGGGLHSVAEGVRLS(ph)PEPGR ddPTM_A549_PD325901_60min_R1 4 SGGGLHSVAEGVRLSPEPGR 20 1 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR 193.93 1.8920999999999997e-45 155753000.0 9430.0 10485.900000000001 8291.9 9782.4 12582.2 11786.7 9823.9 10811.1 11221.400000000001 11143.999999999998 12957.400000000001 True False 10387.326658000913 11369.58359326925 8854.638197245322 10386.636630557665 11698.469678233565 11690.713023067932 10197.753890344347 10595.464129356127 10749.803581469661 10440.365938153065 11363.721943726114 0.9140778619399196 1.0005158212751213 0.7792022931477964 0.9140171399822137 1.029457578790219 1.0287749982761898 0.8973955840211758 0.9323938214808098 0.9459755909818441 0.9187452834427341 1.0 13.47214781565142 SGGGPGPSGS(ph)ETPPPPR ddPTM_A549_MK2206_60min_R1 1 SGGGPGPSGSETPPPPR 17 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 S(0.004)GGGPGPS(0.089)GS(0.486)ET(0.421)PPPPR 43.813 0.059283 1406100.0 208.21 286.18 243.45 458.72 325.95 157.28 227.87 395.45 307.05 345.5 650.71 True False 243.35075775423465 300.7453396263895 277.9748707302145 571.1064205927233 278.0031867833541 173.92326520598562 269.2710294029441 451.5062485148332 237.50366525809454 267.45131003982885 489.1207483176202 0.497526957487009 0.6148693153190357 0.568315434759897 1.167618471629145 0.5683733265038826 0.3555834950862586 0.5505205623133527 0.9230977219180215 0.48557266498101376 0.5468001734944886 1.0 8.934046854327844 -10.953805748314885 1.1395860424800537 1.0060141770203368 0.6306597401417886 0.0 0.2511627021444447 0.543596494418991 1.2208685589805761 0.1654834093002309 0.03600619714613482 1.1122290950218712e-11 10.953805748314885 -0.3753544368785482 SGGGPGPSGSET(ph)PPPPR ddPTM_A549_MK2206_60min_R1 1 SGGGPGPSGSETPPPPR 17 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 S(0.003)GGGPGPS(0.04)GS(0.036)ET(0.922)PPPPR 49.482 0.022015 1455900.0 319.16 305.75 261.88 244.93 512.35 229.51 360.16 130.73 390.46 432.25 677.09 True False 373.02640528716915 321.3113690361612 299.01852186004777 304.93786099532576 436.98399370594115 253.79659586359193 425.5964100134478 149.26137784383408 302.0214334364944 334.60442478933714 508.9498662666587 0.7329334970130948 0.6313222388544918 0.5875205824366604 0.5991510779483277 0.858599289771673 0.4986671825366351 0.8362246229385218 0.29327324307740404 0.5934207933915707 0.6574408344849133 1.0 8.991379741457525 -10.62037933597931 0.9544193685454965 0.9948568212729869 0.6254764703171423 0.05524446919486603 0.17731653294312233 0.36434129473522014 0.6043323200980291 0.08845461774100108 0.025436212520794917 2.3967385651128307e-11 10.62037933597931 -0.36938035095584465 SGGGPGS(ph)GPR ddPTM_A549_MK2206_60min_R1 1 SGGGPGSGPR 10 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 S(0.008)GGGPGS(0.992)GPR 46.843999999999994 0.03435 3156900.0 871.39 772.5 735.61 395.22 838.57 460.71 471.93 492.17 749.49 1107.8 1124.9 True False 1018.4593285599278 811.8169503857215 839.9305592846715 492.04891774210006 715.2174638469616 509.46202640545266 557.6735722391342 561.9366047074111 579.7317116895917 857.547210599486 845.5562843394002 1.2044843701393693 0.9600980625671324 0.9933467172334673 0.5819233170580933 0.8458543530378143 0.6025169889234224 0.6595345366924007 0.6645762264618847 0.68562166993119 1.0141811095040867 1.0 9.723756980406081 -5.551861034356301 1.526659409202628 0.7907992168412836 1.2272945569023639 0.4349579862568551 0.14980219990814322 0.5690386635918186 1.792230202678779 0.024099234982275716 0.3149402421983501 2.806331464859081e-06 5.551861034356301 0.43649534006108026 SGGGSVGAVVVKQEPLEEDS(ph)PSSSSAGLDK ddPTM_A549_MK2206_60min_R1 2 SGGGSVGAVVVKQEPLEEDSPSSSSAGLDK 30 1 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 SGGGSVGAVVVKQEPLEEDS(0.949)PS(0.034)S(0.007)S(0.005)S(0.005)AGLDK;SGGGSVGAVVVKQEPLEEDS(0.936)PS(0.031)S(0.009)S(0.011)S(0.013)AGLDK 107.14 4.5982e-15 5693200.0 1168.35 1352.9 1464.9299999999998 1617.92 1911.15 1137.3 1287.09 1366.6599999999999 2187.67 1828.7799999999997 1988.66 True False 1365.5389165849867 1421.7568312968851 1672.679101987322 2014.3104726311894 1630.022366685097 1257.6483311213594 1520.937592637185 1560.3882402207157 1692.1662379911263 1415.6573278571288 1494.8208377761496 0.9135134339018876 0.9511218972649846 1.1189829976385484 1.3475263534778432 1.0904466445022851 0.8413371685347707 1.017471495045446 1.0438630508670932 1.1320194335185803 0.9470414728518285 1.0 10.545756864777017 -4.244382988580465 15.923665059777194 1.0552900053362828 1.0583205749144686 0.0 0.13130298988377534 0.0 0.0 0.017186479743345112 0.0 5.6966168668974515e-05 4.244382988580465 0.0030305695781858155 SGGGSVGAVVVKQEPLEEDS(ph)PSSSSAGLDK ddPTM_A549_PD325901_60min_R1 1 SGGGSVGAVVVKQEPLEEDSPSSSSAGLDK 30 1 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 SGGGSVGAVVVKQEPLEEDS(0.854)PS(0.025)S(0.031)S(0.04)S(0.05)AGLDK 128.54 7.2396e-28 8866900.0 991.6 1056.5 1315.1 1371.6 919.01 1906.2 1552.8 1348.9 1580.0 1500.1 1543.5 True False 1092.2665020226616 1145.5349627870726 1404.3505943387318 1456.3206168703882 854.4619080123848 1890.6765391985966 1611.8926537247646 1321.9951313084216 1513.5980945980057 1405.383429991333 1353.6592850526545 0.8068991319186901 0.8462505856800692 1.037447613181411 1.0758398608507609 0.6312237632079981 1.3967152296562229 1.1907668875939232 0.976608475933439 1.1181529291095802 1.0382106084668614 1.0 10.4026489440914 -7.252343831492548 24.99753579780087 1.0830499994324585 0.8973622982703992 0.3587150275792048 0.1550843194866907 734.4810305246482 2018592.7804107603 0.022829080352076914 0.03917300100190935 5.593146160707373e-08 7.252343831492548 -0.18568770116205935 SGGGYGGDR ddPTM_A549_PD325901_60min_R1 1 SGGGYGGDR 9 0 Q92804-2;Q92804;A0A075B7F4;A0A075B7C1 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 80.455 0.0046304 12948000.0 3822.2 4272.5 3949.6 3963.7 4926.7 4538.0 4220.9 4117.5 5065.8 4563.6 6040.3 False True 4210.2269302450795 4632.558569340055 4217.643606874196 4208.528746784165 4580.665588192312 4501.0440325691025 4381.528659265106 4035.373232383736 4852.902042794032 4275.4535171711495 5297.3813926164885 0.7947751196682404 0.8744997246747108 0.7961751843567021 0.7944545493080845 0.8647037561948743 0.8496733950179 0.8271121776076192 0.7617675476431158 0.9160945159731234 0.8070881064237312 1.0 12.371063665947668 -9.204685997362025 1.4280534671662557 0.9756370145367166 0.8235643462371415 0.05619222400503299 0.06316372237158586 0.12808554061398425 0.5402769753940401 0.008651840392608308 0.00775758450270175 6.241859699362782e-10 9.204685997362025 -0.1520726682995751 SGGGYGGDRS(ph)SGGGYSGDR ddPTM_A549_PD325901_60min_R1 1 SGGGYGGDRSSGGGYSGDR 19 1 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 SGGGYGGDRS(0.499)S(0.499)GGGYS(0.002)GDR 146.25 2.7027e-21 49181000.0 3009.4 2784.8 3214.7 3303.9 3958.6 4349.1 3531.5 3754.0 3453.9 3972.0 4121.1 True False 3314.9120725968105 3019.4848692564487 3432.868873561494 3507.974399298685 3680.5615924286226 4313.68237153951 3665.8931650109507 3679.1235250439704 3308.744594260793 3721.207242134238 3614.2308258053067 0.9171832769862441 0.8354432837265342 0.9498200416672606 0.9706005422376569 1.0183526647356664 1.1935270820945298 1.0142941449220064 1.017954774436468 0.9154768341403743 1.0295986674578526 1.0 11.819472932704771 -5.966881525558824 3.788511251507681 0.988229037894225 0.8766097212867473 0.32062709498514186 0.07113493827389321 0.24449289895544662 7.552518195434532 0.011166848673834537 0.03704120966904285 1.0792410963294613e-06 5.966881525558824 -0.1116193166074777 SGGGYGGDRSS(ph)GGGYSGDR ddPTM_A549_MK2206_60min_R1 3 SGGGYGGDRSSGGGYSGDR 19 1 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 SGGGYGGDRS(0.16)S(0.838)GGGYS(0.002)GDR;SGGGYGGDRS(0.046)S(0.954)GGGYSGDR;SGGGYGGDRS(0.174)S(0.817)GGGY(0.001)S(0.007)GDR 121.25 9.1098e-15 77773200.0 2381.33 2806.33 2019.39 2277.18 3582.08 2048.4 2003.1399999999999 2215.6099999999997 3477.01 3399.7 3737.86 True False 2783.2402860712346 2949.1602101954218 2305.7698673398572 2835.0892022264948 3055.1607771526815 2265.1603283821264 2367.0846089358556 2529.6795025210513 2689.472786644021 2631.705408805805 2809.646202312088 0.9906016934733193 1.0496553650664366 0.8206619984546148 1.009055588526936 1.0873827368864297 0.8062083854252189 0.8424849388467331 0.9003551765483323 0.9572282746599288 0.9366679002645053 1.0 11.456172758771883 -4.22648941728548 15.863094024379782 0.9597813351363567 0.9560646031027633 0.0 0.09051586959868568 0.0 0.0 0.011711202100348777 0.0 5.936228131788075e-05 4.22648941728548 -0.0037167320335933507 SGGGYGGDRSS(ph)GGGYSGDR ddPTM_A549_PD325901_60min_R1 1 SGGGYGGDRSSGGGYSGDR 19 1 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 SGGGYGGDRS(0.101)S(0.898)GGGYS(0.002)GDR 113.42 1.3371999999999999e-11 47170000.0 2647.0 2950.0 3695.6 3000.4 3373.4 3802.8 3744.2 3688.0 3746.1 3604.1 4061.0 True False 2915.721491381593 3198.6068530259004 3946.4056394481154 3185.7278935971967 3136.464021598218 3771.831257614321 3886.687579904854 3614.4399468199713 3588.664444413663 3376.5365109204454 3561.522744800017 0.8186727139785018 0.8981009198090929 1.1080669483888723 0.8944847813336311 0.8806525316109791 1.0590501669886467 1.0912993846746009 1.0148580272573622 1.0076208132190856 0.9480597915176424 1.0 11.7982784884006 -7.262829526388514 24.99989861407086 1.0153948913296786 0.9278103519907518 0.3057323628447415 0.07454077060873353 137.7371482372221 2477013.7556772926 0.010773637664814583 0.017782852971365403 5.459721294732381e-08 7.262829526388514 -0.08758453933892685 SGGIVIS(ph)PFR ddPTM_A549_PD325901_60min_R1 2 SGGIVISPFR 10 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 SGGIVIS(1)PFR;SGGIVIS(1)PFR 77.593 0.0013911 5809000.0 1473.76 1338.98 1422.98 1524.11 1648.5 1562.15 1283.01 1393.42 1503.4 1644.9 1248.98 True False 1623.3750302752296 1451.8205437507195 1519.5519798738708 1618.250813195048 1532.7150470162646 1549.4283683291824 1331.8356476400113 1365.627144983156 1440.2173262143303 1541.0407332796096 1095.3633779365498 1.4820424554756892 1.325423665784468 1.3872583386313402 1.4773643576102715 1.3992754166234769 1.4145336602799357 1.2158847688964451 1.2467343463278189 1.3148306354074188 1.4068762607187295 1.0 10.097193836297334 -13.97919239909006 0.16053786211857565 8.432516816928971e-12 1.4785165730391696 0.0 0.13782600987564705 11.495189223665282 0.15997628985538132 3.7788214376641753 0.1093458817128292 1.0490775683006294e-14 13.97919239909006 1.478516573030737 SGGIVIS(ph)PFRLEELTNR ddPTM_A549_MK2206_60min_R1 4 SGGIVISPFRLEELTNR 17 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 SGGIVIS(1)PFRLEELTNR;SGGIVIS(1)PFRLEELTNR;SGGIVIS(1)PFRLEELTNR;SGGIVIS(0.999)PFRLEELT(0.001)NR 264.66 2.3576999999999994e-100 117033000.0 13096.5 13875.7 13141.1 11731.899999999998 18100.6 12541.2 13818.2 13187.099999999999 19477.8 18495.8 18519.5 True False 15306.869021316617 14581.913862093415 15004.705581239787 14606.216026664993 15438.025717719836 13868.301459825194 16328.788074322038 15056.411808799998 15066.109399655148 14317.585934109016 13920.597037802041 1.0995842333306602 1.0475063549713808 1.0778780206404794 1.0492521252501685 1.1090060056904991 0.9962432948935426 1.1729948097757905 1.0815923891707804 1.0822890253013153 1.0285180941039334 1.0 13.764933467532424 -10.583947141896976 0.8655419516171151 0.9998043591133653 1.07873857016724 0.2539279768315351 0.04222843429300569 0.5303876938828747 0.7077783901917793 0.026257964829230023 0.007181227130728938 2.6064707649811332e-11 10.583947141896976 0.07893421105387477 SGGIVIS(ph)PFRLEELTNR ddPTM_A549_PD325901_60min_R1 3 SGGIVISPFRLEELTNR 17 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 SGGIVIS(1)PFRLEELTNR;SGGIVIS(1)PFRLEELTNR;SGGIVIS(0.997)PFRLEELT(0.003)NR 195.56 1.4129e-48 142275000.0 15828.0 16154.999999999998 16061.7 16232.4 18604.4 16558.899999999998 17243.9 17918.8 18424.0 18250.8 18600.3 True False 17434.84690804226 17516.43854597742 17151.743548848306 17235.03848154483 17297.691125695725 16424.049808485786 17900.126050724157 17561.395476973346 17649.703351185846 17098.441373298978 16312.58101701644 1.0687975673411294 1.0737993287331524 1.051442658335704 1.0565488357462336 1.060389591791248 1.0068333019375086 1.0973202850028252 1.076555295489672 1.0819687781335516 1.0481751082469886 1.0 13.99369744644623 -10.843090200847653 1.0760616426436618 0.999801311106987 1.0642044808053652 0.1872338082619025 0.02569656279987057 0.3230851393883425 0.6608274076193952 0.015683710558716348 0.0037952459650866183 1.4351913201526286e-11 10.843090200847653 0.06440316969837823 SGGLQT(ph)PECLS(ph)REGS(ph)PIPHDPEFGSK ddPTM_A549_PD325901_60min_R1 2 SGGLQTPECLSREGSPIPHDPEFGSK 26 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 3 S(0.063)GGLQT(0.961)PECLS(0.988)REGS(0.988)PIPHDPEFGSK;S(0.159)GGLQT(0.899)PECLS(0.971)REGS(0.971)PIPHDPEFGSK 60.181000000000004 0.0002268 28427000.0 2824.7 3282.6000000000004 2923.1 3080.1 3692.7 3628.0 2952.6 3183.8 2968.0 2986.3 3893.3999999999996 True False 3111.461464565765 3559.236222285703 3121.479144028244 3270.3507815853604 3433.337491123422 3598.454770859567 3064.9628087247133 3120.296611357217 2843.2652814980233 2797.744508354855 3414.5364822960823 0.9112397775505633 1.0423775644922435 0.9141736104483575 0.9577729798881033 1.005506167213272 1.0538633250858722 0.8976219245616903 0.9138272874035875 0.8326943631265842 0.8193628982618251 1.0 11.737474032993203 -7.804572454496518 24.999987067545224 0.9167425643772438 0.9806652903194666 0.296453053005698 0.06281383742195137 197.07005628226122 114221.3653586586 0.011119962814892642 0.015364495448594853 1.5682942331809405e-08 7.804572454496518 0.06392272594222281 SGGLQTPECLS(ph)REGS(ph)PIPHDPEFGSK ddPTM_A549_MK2206_60min_R1 2 SGGLQTPECLSREGSPIPHDPEFGSK 26 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.008)GGLQT(0.054)PECLS(0.967)REGS(0.97)PIPHDPEFGSK;S(0.019)GGLQT(0.311)PECLS(0.856)REGS(0.805)PIPHDPEFGS(0.009)K 70.268 0.00040019 15216700.0 2117.6 2165.6 2693.8999999999996 1927.62 3032.0 2713.5 2332.2 2995.6 4032.0 3696.6 3996.7 True False 2474.999109650675 2275.819789974524 3075.9355278707153 2399.8869865341508 2585.996816466114 3000.640768924476 2755.9305515142264 3420.2354736402476 3118.758437780936 2861.5354925998004 3004.209086691508 0.8238438265215274 0.7575437408988238 1.02387531596817 0.7988415310923354 0.8607912238605319 0.9988122272238509 0.9173564395776769 1.1384811692340973 1.0381296200710115 0.9525087668752004 1.0 11.552769509576743 -7.438026066381842 1.5709043252878638 1.0247844298131619 0.8511264439382122 0.4697034793703939 0.08117635198948776 0.2294077097188506 1.1190727105410245 0.012024848397009413 0.021539545875776205 3.6473205502798765e-08 7.438026066381842 -0.17365798587494963 SGGLQTPECLS(ph)REGS(ph)PIPHDPEFGSK ddPTM_A549_PD325901_60min_R1 2 SGGLQTPECLSREGSPIPHDPEFGSK 26 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.005)GGLQT(0.098)PECLS(0.928)REGS(0.969)PIPHDPEFGSK;S(0.017)GGLQT(0.113)PECLS(0.88)REGS(0.99)PIPHDPEFGSK 84.073 4.7173000000000006e-06 54612000.0 2586.3 2386.2 2774.8 2601.3 3166.3 3131.0 2759.9 3074.4 2849.2 3270.7 3482.6000000000004 True False 2848.859272066569 2587.293448369628 2963.1146142279003 2761.9763930190607 2943.9100111420044 3105.5021740797424 2864.929504775228 3013.0786801798586 2729.4580323598975 3064.1874438188456 3054.262278020328 0.9327487336526664 0.8471091258235447 0.9701572243980611 0.9043022967920368 0.9638694202287532 1.0167765212660869 0.938010309524623 0.9865160244629799 0.8936554178736222 1.003249611492092 1.0 11.576608240363392 -5.776796010436096 24.996506756861514 0.9539027938062745 0.889928913901883 0.2878554565782693 0.042586740610451826 230.49616806035337 375188.03283453156 0.00639197077820339 0.019980259907969828 1.671875715503152e-06 5.776796010436096 -0.06397387990439152 SGGNEVS(ph)IEER ddPTM_A549_MK2206_60min_R1 1 SGGNEVSIEER 11 0 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 S(0.01)GGNEVS(0.99)IEER 47.621 0.031822 1498700.0 663.7 950.09 728.2 744.24 945.43 656.91 682.3 834.78 890.26 986.46 979.35 True False 775.7163340929135 998.445522837502 831.469709861336 926.5788334102034 806.3584994035483 726.4237801784328 806.2650781657476 953.1126214065308 688.6175314530896 763.618000873776 736.1503663150421 1.0537471277450112 1.3563064946030448 1.1294835238939502 1.2586814811332523 1.0953720004785816 0.9867872291019866 1.0952450953759347 1.2947254596605577 0.9354305356120539 1.0373125326232318 1.0 9.523856671519164 -7.9577308912095726 0.5151112269022715 0.9678087963958192 1.2072468171565298 0.1723945567039583 0.1175986443741772 0.6983807336880605 0.39573498172761173 0.034045382581771186 0.06112988717978533 1.102222085364169e-08 7.9577308912095726 0.23943802076071063 SGGS(ph)GHAVAEPAS(ph)PEQELDQNK ddPTM_A549_PD325901_60min_R1 1 SGGSGHAVAEPASPEQELDQNK 22 0 P46013 P46013 MKI67 Antigen KI-67 2 S(0.431)GGS(0.57)GHAVAEPAS(0.999)PEQELDQNK 50.705 0.0036967 1235100.0 964.09 1279.2 920.04 1024.9 652.11 569.1 865.49 888.69 901.55 865.79 953.6 True False 1061.9637070744536 1387.0026733527898 982.4794470499631 1088.2057452832178 606.3080432573713 564.4654382845034 898.4266955643001 870.9643807861814 863.6609887245766 811.1238716433539 836.313245368455 1.2698157215082533 1.658472684767437 1.174774466972733 1.3011939620826958 0.7249772099331631 0.6749449938890022 1.0742705565645798 1.04143320174543 1.0327003589953583 0.9698804558404389 1.0 9.707899602051073 -6.34054680845997 2.10876063258339 0.9823085923648592 1.4296138694824245 0.5460456355196861 0.17484785578598463 0.1892616143703504 1.6207889918800522 0.02474296429365179 0.07392187313244532 4.5651304436366913e-07 6.34054680845997 0.4473052771175653 SGGSGHAVAEPAS(ph)PEQELDQNK ddPTM_A549_MK2206_60min_R1 2 SGGSGHAVAEPASPEQELDQNK 22 0 P46013 P46013 MKI67 Antigen KI-67 1 SGGSGHAVAEPAS(1)PEQELDQNK;SGGSGHAVAEPAS(1)PEQELDQNK 124.51 4.4907e-16 14258700.0 3724.6 4924.4 4209.1 4126.200000000001 5854.5 4221.8 3457.7 3440.0 5958.5 6014.6 6173.4 True False 4353.221422272813 5175.030926186985 4806.013671762364 5137.119185232155 4993.310805409255 4668.548073795969 4085.919332806248 3927.6305345581654 4608.909263769275 4655.897682678882 4640.374402827673 0.9381185750055253 1.1152184019965097 1.0356952380466877 1.1070484274074488 1.0760577427473343 1.0060714219419724 0.880515014115335 0.8464038014184398 0.9932192671696437 1.0033452645204124 1.0 12.180025496763117 -7.46267622667598 5.841827867414198 0.9738454030530772 1.0585708258193203 0.3499568975684987 0.06594315340263475 0.24351125039124943 17.2211988556477 0.010447235980737733 0.016664667998006467 3.44606744736225e-08 7.46267622667598 0.08472542276624306 SGGVTEASSLLGGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SGGVTEASSLLGGSPR 16 0 Q92729-3;Q92729-2;Q92729-4;Q92729 Q92729-3 PTPRU Receptor-type tyrosine-protein phosphatase U 1 SGGVTEASSLLGGS(1)PR 132.84 3.5103e-10 3468300.0 2045.8 1946.8 1985.9 2104.1 2287.2 2624.7 2217.5 2148.4 2387.0 1967.6 2520.8 True False 2253.4881099616387 2110.8636682951933 2120.6751161868206 2234.0654782421866 2126.554962411646 2603.3253134165125 2301.8881759625588 2105.548476612805 2286.6826910161008 1843.3654002072842 2210.7575806677883 1.0193284553980555 0.9548146240699893 0.959252671903648 1.0105429459015394 0.9619123240863399 1.1775715873063495 1.0412214329113567 0.9524103841257876 1.0343434807200247 0.8338161616302008 1.0 11.110325120606452 SGGYGGDR ddPTM_A549_PD325901_60min_R1 1 SGGYGGDR 8 0 Q92804-2;Q92804;A0A075B7F4;A0A075B7C1 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 56.011 0.05449 3104200.0 1106.4 1303.3 1100.0 1412.2 1483.0 1047.5 1022.7 1220.0 1508.3 1413.5 1509.7 False True 1218.720913511368 1413.1336649317486 1174.6526148373541 1499.4283866610992 1378.8391960722595 1038.9695072975178 1061.619408142913 1195.6661429285148 1444.9113962545396 1324.2513687705807 1324.0164707768004 0.9204726228189175 1.0673082217041177 0.8871888233748222 1.1324846931710635 1.0414063771150026 0.7847104097488715 0.8018173728005521 0.9030598707182378 1.0913092307732473 1.000177413196108 1.0 10.37070535405813 -8.759005295784847 24.9998679346535 1.0431182483205623 0.9443420348291572 0.12303972188093193 0.10326546050856174 93.39446002703757 959229.4155344808 0.018806317081265934 0.02083752183746893 1.7417856339363788e-09 8.759005295784847 -0.09877621349140508 SGIETFS(ph)PPPPPPK ddPTM_A549_MK2206_60min_R1 1 SGIETFSPPPPPPK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 SGIET(0.007)FS(0.993)PPPPPPK 103.88 2.4517e-05 6385500.0 1256.9 1480.1 1430.5 1167.3 1862.5 1537.8 1581.5 1238.3 2877.2 2622.9 2703.1 True False 1469.033991745342 1555.4307679817566 1633.3664102672906 1453.2885524020887 1588.5287172388303 1700.5289752909744 1868.8380787324195 1413.8328171347025 2225.518793944275 2030.3850683168364 2031.84566823525 0.7230047117807252 0.7655260398456929 0.8038831077588404 0.7152553833797503 0.7818156379064652 0.8369380617219617 0.9197736363291755 0.6958367159660706 1.0953188171408899 0.9992811462301258 1.0 10.988575108953547 -8.766666915264778 24.999998132161938 1.045011676551051 0.7849763871511074 0.7531658502664941 0.06389742407477476 43.02121040153615 205742.68663681432 0.011503357343311477 0.012425247773783841 1.7113273245664117e-09 8.766666915264778 -0.2600352893999437 SGIETFS(ph)PPPPPPK ddPTM_A549_PD325901_60min_R1 2 SGIETFSPPPPPPK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 SGIET(0.053)FS(0.947)PPPPPPK;SGIET(0.005)FS(0.995)PPPPPPK 137.59 2.8458e-09 25971000.0 8168.9 8065.700000000001 7096.799999999999 8117.7 9428.1 9066.5 8971.099999999999 9557.0 8444.2 9199.2 10378.7 True False 8998.200714373666 8745.424845576614 7578.43152452521 8619.111892365669 8765.902781179282 8992.665429988494 9312.500119674278 9366.378137678532 8089.319639496509 8618.360942054707 9102.185695999991 0.9885758228738377 0.9608049250653985 0.8325946951242267 0.9469277138735356 0.9630547072920639 0.9879676959282838 1.0231059254006112 1.0290251649990663 0.8887227650224064 0.9468452116772454 1.0 13.151997304056028 -6.5155231360425 24.515850409290767 0.962158364186986 0.9238544807528342 0.11343779779213203 0.0520441285707346 580.8304672143867 1935872.2846593128 0.008720758080072158 0.018785628087448342 3.0512434768128624e-07 6.5155231360425 -0.03830388343415181 SGIIPT(ph)SPTPYTYNK ddPTM_A549_PD325901_60min_R1 1 SGIIPTSPTPYTYNK 15 0 R4GN33;Q8IW41-2;Q8IW41;F8VRP2 R4GN33 MAPKAPK5 MAP kinase-activated protein kinase 5 1 S(0.005)GIIPT(0.488)S(0.488)PT(0.015)PY(0.001)T(0.002)Y(0.001)NK 48.111999999999995 0.029289 1721600.0 492.84 691.34 799.71 533.83 806.0 689.29 555.3 767.71 794.57 826.1 931.26 True False 542.8727539903678 749.6016480579411 853.9831296468917 566.8034666841057 749.3893405490501 683.6766507733714 576.4322453718196 752.3974217931559 761.1769860916055 773.939905016892 816.7209237435278 0.6646979870456268 0.917818591719264 1.0456241597589646 0.6939989538728865 0.9175586406114634 0.8370994680039129 0.7057885118574907 0.9212417607038421 0.9319915334147059 0.9476185591884381 1.0 9.673699378657268 -8.504515057299265 15.568948834790723 0.9657146992225825 0.8352452679127049 0.23893607790011295 0.10715015575263227 6.14780703331883 5211.579336089676 0.017152924661730417 0.020423234753024103 3.1295719651917996e-09 8.504515057299265 -0.13046943130987754 SGIS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SGISPK 6 0 Q86U86-8;Q86U86;E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;H0Y5B5;Q86U86-6 Q86U86-8 PBRM1 Protein polybromo-1 1 S(0.01)GIS(0.99)PK 76.825 0.044979000000000005 33320000.0 9359.7 8497.1 8664.7 9138.8 11109.0 9193.6 8020.2 7619.2 9355.3 9895.8 10920.0 True False 10309.889853753033 9213.180437575042 9252.738647073837 9703.282920279305 10328.742163969473 9118.730369728362 8325.413099821833 7467.229078853234 8962.129274932104 9270.97749917221 9576.9092275834 1.0765362403204684 0.962020232063937 0.9661508141294807 1.0131956657093424 1.078504757486961 0.9521579617215761 0.8693215004944383 0.7797117944217464 0.935806016529779 0.968055275335591 1.0 13.225344412283489 -7.487757165741165 23.868429441652207 0.9433217271770571 1.013062653259475 0.32891648353317093 0.06690735584875368 516.292493026428 350869.33903000783 0.01154674444007377 0.018452340619737745 3.252691196523248e-08 7.487757165741165 0.069740926082418 SGIT(ph)SPVEK ddPTM_A549_MK2206_60min_R1 1 SGITSPVEK 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 S(0.101)GIT(0.449)S(0.449)PVEK 114.89 0.00022463 15375000.0 7125.7 6785.9 6087.7 6271.4 8287.3 7045.2 7011.0 6750.7 9934.5 8950.3 9311.8 True False 8328.343953361264 7131.273325077632 6951.027400058856 7807.893281533847 7068.249148119922 7790.718387774731 8284.807948146054 7707.632398151695 7684.351612136584 6928.421013746683 6999.4230673940965 1.1898614890358281 1.0188373036483167 0.9930857633737435 1.1155052646990156 1.0098331076808948 1.1130515062115307 1.1836415470783237 1.1011811007762482 1.097855000068954 0.9898560134222822 1.0 12.773020296418041 -10.650392267427925 0.9604255372025063 1.0009187832918116 1.088164656850041 0.26337736719599836 0.06138218385984996 0.6761456564135874 1.1277534164872334 0.039333582030648684 0.010972250781934931 2.2366999733426087e-11 10.650392267427925 0.08724587355822933 SGIT(ph)SPVEK ddPTM_A549_PD325901_60min_R1 1 SGITSPVEK 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 S(0.036)GIT(0.482)S(0.482)PVEK 94.66 0.00099809 13498000.0 6426.6 7068.4 7854.9 7240.8 7281.5 7088.4 6751.9 7774.7 8058.2 8674.2 9309.4 True False 7079.023700987128 7664.078874551956 8387.980749350854 7688.047770950069 6770.072559811297 7030.674420551528 7008.847249281447 7619.627509365842 7719.541877145346 8126.509531651767 8164.4028171488035 0.8670595828660111 0.9387188562590335 1.0273844808015156 0.9416546369811419 0.8292183410636225 0.8611376212089937 0.8584641652613971 0.9332743226928129 0.945512127467663 0.9953587192663444 1.0 12.995131648802252 -9.419085124617677 0.9700551303332972 0.9885643351500376 0.9081369502971927 0.3024426832075062 0.05222023675585438 0.4758925764657505 0.9450126488956874 0.016137309249881774 0.012044185889180865 3.809911392680357e-10 9.419085124617677 -0.08042738485284495 SGIT(ph)SPVEKR ddPTM_A549_MK2206_60min_R1 1 SGITSPVEKR 10 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 S(0.001)GIT(0.585)S(0.414)PVEKR 81.676 0.00067998 27930000.0 5896.3 6440.8 5744.1 5651.4 7368.6 5557.3 5935.1 5209.0 8398.7 8062.1 8655.0 True False 6891.451289305479 6768.609209118911 6558.699753384375 7035.9932537009845 6284.688701125394 6145.369797362812 7013.430844821236 5947.391701893457 6496.407859967944 6240.866010628379 6505.724634151932 1.0592903445572637 1.0404081927456568 1.0081428468328262 1.0815080024699164 0.9660243945976125 0.9446095774024265 1.0780399170300092 0.9141782101677813 0.9985679113845244 0.9592883747133758 1.0 12.667494043814747 -6.7688623409682025 24.990420153388847 0.9926847392664762 1.0440428013915413 0.33439266229665865 0.04328801206643982 167.56212520568843 564122.8579424552 0.0056066865922800935 0.010749125782921023 1.7026981298774244e-07 6.7688623409682025 0.05135806212506511 SGITS(ph)PVEK ddPTM_A549_MK2206_60min_R1 1 SGITSPVEK 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 S(0.031)GIT(0.178)S(0.791)PVEK 113.99 0.00022376 14934000.0 8568.7 8243.6 6611.6 7090.5 9896.9 9062.0 8244.3 8747.2 11993.0 10023.0 11516.0 True False 10014.887075398443 8663.164028737521 7549.224297884114 8827.672818304642 8441.079120344155 10020.93482513124 9742.18259405228 9987.142387176515 9276.604648885608 7758.797338724176 8656.259374568881 1.1569532106236393 1.000797648715209 0.8721116097864268 1.01980225364311 0.9751416582020519 1.1576518668758498 1.1254494779435236 1.1537480515564977 1.0716643584108896 0.8963221875627541 1.0 13.07952801312418 SGITS(ph)PVEK ddPTM_A549_PD325901_60min_R1 1 SGITSPVEK 9 0 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 S(0.01)GIT(0.06)S(0.93)PVEK 81.865 0.0014234999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGITS(ph)PVEKR ddPTM_A549_PD325901_60min_R1 1 SGITSPVEKR 10 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 SGIT(0.059)S(0.941)PVEKR 69.846 0.001424 55515000.0 5170.7 5183.3 5969.0 5780.8 7634.9 7142.1 6355.0 6808.9 6431.9 6582.7 7345.9 True False 5695.6256575318475 5620.114881792932 6374.092234512879 6137.866886850642 7098.650962975112 7083.937105555707 6596.84300258943 6673.091148021283 6161.589610534753 6167.067198589391 6442.400869496788 0.8840843301911341 0.8723634240773216 0.9893970219538288 0.9527297371251701 1.1018642128566556 1.0995803038423824 1.0239727605004973 1.0358081223440716 0.956412017095737 0.95726225727259 1.0 12.653382717882305 -5.79198739947663 4.9887173141279115 1.0010552073233754 0.8769115852143106 0.5044001161723979 0.050451517033444276 0.12528018907189423 7.627778969348267 0.00774970455226645 0.027050444782033195 1.6144053961455857e-06 5.79198739947663 -0.12414362210906482 SGKDGVMEMNS(ph)IEPAKETTTNV ddPTM_A549_PD325901_60min_R1 3 SGKDGVMEMNSIEPAKETTTNV 22 2 P11169 P11169 SLC2A3 Solute carrier family 2, facilitated glucose transporter member 3 1 SGKDGVMEMNS(0.999)IEPAKETTT(0.001)NV;SGKDGVMEMNS(0.999)IEPAKETTTNV;SGKDGVMEMNS(0.993)IEPAKET(0.003)T(0.003)T(0.001)NV 96.98200000000001 1.9416e-07 24890400.0 6591.0 6956.9 7827.500000000001 7565.6 8703.3 8394.8 7966.9 8584.800000000001 8406.900000000001 8567.1 10157.400000000001 True False 7260.113467962245 7543.1823782426745 8358.721220581263 8032.909929275739 8092.010232755019 8326.435532087069 8270.084739154963 8413.569429354684 8053.587228782265 8026.1718439295655 8908.10419306371 0.8150009598692535 0.8467775201951689 0.9383277338729128 0.901753027937253 0.9083874702606037 0.9347034286566208 0.9283776390485486 0.9444848473938939 0.9040742063898609 0.900996628460985 1.0 13.120902717275577 -2.000000161302909 0.018844430017358846 1.6237862597956532 1.3213321316196378e-07 0.34303792309500325 0.03804343615242016 1332.6582741197844 1.8833352481894103 60.800834457375636 107.8168927378845 0.009999996285863956 2.000000161302909 -1.62378612766244 SGKDS(ph)EAWVPDSEERLILREEFTSR ddPTM_A549_PD325901_60min_R1 1 SGKDSEAWVPDSEERLILREEFTSR 25 3 Q96F63;M0QXS4 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 S(0.003)GKDS(0.992)EAWVPDS(0.003)EERLILREEFT(0.001)S(0.001)R 49.793 0.0026255 99397000.0 5484.8 6600.7 6369.2 5643.1 7295.3 5744.8 6116.9 5934.3 5524.2 7263.9 6299.1 True False 6041.61285830365 7156.964154158668 6801.452213110983 5991.66147059003 6782.903295418711 5698.01625348237 6349.681976796117 5815.93573113171 5292.037084922978 6805.256114335068 5524.350633284853 1.0936331271049726 1.295530394294151 1.2311767779784732 1.0845910892204371 1.2278191131733986 1.0314363862335534 1.1493987978493883 1.0527817868927478 0.9579473563893357 1.231865347817101 1.0 12.43158917573658 -7.855849737558419 0.7754922565080463 0.9785500985380549 1.1985946904429623 0.0497733726627374 0.10309029073455486 0.27197235973510664 0.3302543735633052 0.01367284079747701 0.02367816343787017 1.3936389075320706e-08 7.855849737558419 0.22004459190490744 SGKNS(ph)QEDS(ph)EDS(ph)EDKDVK ddPTM_A549_PD325901_60min_R1 4 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 S(0.02)GKNS(0.982)QEDS(0.998)EDS(1)EDKDVK;S(0.065)GKNS(0.935)QEDS(1)EDS(1)EDKDVK;S(0.017)GKNS(0.983)QEDS(1)EDS(1)EDKDVK;S(0.362)GKNS(0.639)QEDS(0.999)EDS(1)EDKDVK 96.303 6.894e-07 116059000.0 23232.3 24184.000000000004 21216.300000000003 19815.2 30886.2 26803.9 24676.3 24749.2 28561.100000000002 26772.3 27122.899999999998 True False 25590.825993284667 26222.070553755388 22656.16570197615 21039.139900415663 28716.85986360553 26585.61792520472 25615.37009988949 24255.55779062821 27360.776290900692 25081.89240901069 23786.955246229096 1.0758344533120328 1.1023718791379291 0.9524617786283427 0.8844822585585417 1.207252444305917 1.1176553556352822 1.0768662838406042 1.0196999800751465 1.1502428960611992 1.05443896242193 1.0 14.537882996739741 -6.759479799154773 24.999977487468687 1.080442608531809 1.0071632309053398 0.2174561143371032 0.07687687692843467 82.90352676391872 1057641.7016470921 0.012451867834862605 0.024939422135073386 1.7398836253903191e-07 6.759479799154773 -0.0732793776264693 SGKNS(ph)QEDS(ph)EDSEDKDVK ddPTM_A549_MK2206_60min_R1 1 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 S(0.321)GKNS(0.678)QEDS(0.805)EDS(0.195)EDKDVK 105.79 1.6036000000000001e-09 26906000.0 7238.7 8719.5 7560.2 6376.1 10490.0 7322.3 6812.4 6782.3 11354.0 11630.0 11668.0 True False 8460.415590776514 9163.285306004273 8632.350041875408 7938.244786234002 8946.93489601897 8097.140925850633 8050.124898866096 7743.711794922629 8782.337128612291 9002.774922614213 8770.513579582286 0.964643120839847 1.0447832071472254 0.9842468133190602 0.9051060367450087 1.0201152777241451 0.9232231216995933 0.9178624291292073 0.8829256946765299 1.0013481022431263 1.0264820686866765 1.0 13.098445610458922 SGKNS(ph)QEDS(ph)EDSEDKDVK ddPTM_A549_PD325901_60min_R1 3 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 S(0.013)GKNS(0.987)QEDS(0.992)EDS(0.008)EDKDVK;S(0.015)GKNS(0.984)QEDS(0.964)EDS(0.037)EDKDVK;S(0.097)GKNS(0.903)QEDS(0.908)EDS(0.092)EDKDVK 112.23 4.558e-10 102646000.0 17645.699999999997 16806.1 19243.6 19991.7 23939.199999999997 21753.3 21001.9 22226.7 23876.699999999997 22162.199999999997 23319.7 True False 19437.078473922225 18222.40902801307 20549.586417167367 21226.541904555066 22257.793177756586 21576.14833708363 21801.138797180658 21783.37103199117 22873.245332460887 20762.874909775284 20451.52473575795 0.9503975241483076 0.8910049134944232 1.0047948347458888 1.0378953246181228 1.0883195001515222 1.0549897191459452 1.0659908773971756 1.0651221027987505 1.1184127163129671 1.0152238123093562 1.0 14.319920784903061 -6.007167146267754 2.6069304597320824 1.0598253922616574 0.9204419996255888 0.696546648590699 0.03392242370074415 0.14064690459208726 1.888398413193568 0.006186944868749468 0.022436999885230343 9.83632463746834e-07 6.007167146267754 -0.13938339263606858 SGKNS(ph)QEDSEDSEDKDVK ddPTM_A549_MK2206_60min_R1 1 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.001)GKNS(0.999)QEDSEDSEDKDVK 162.01 2.2987e-23 36019000.0 2829.0 3242.8 3486.3 2892.9 4050.4 2885.2 3165.8 2908.4 4540.3 4325.6 4404.7 True False 3306.4660375905546 3407.8446688813196 3980.7097631002134 3601.6606298672164 3454.5915255324353 3190.5099489592426 3740.9848812210503 3320.674606601447 3511.9292993692425 3348.4439557403284 3310.891426464356 0.9986633844775372 1.0292831234639725 1.2023075511573464 1.0878220291606988 1.0434022384181696 0.9636407655826797 1.12990261514434 1.0029548477666448 1.0607201647562243 1.0113421204258801 1.0 11.693003986103816 -6.834834114089324 5.18062711952204 1.0306273593675823 1.0846320916312886 0.1290865979919389 0.061560212933308614 0.31326051133751404 15.270709628263544 0.008844812907544554 0.017122090969152244 1.4627357837230521e-07 6.834834114089324 0.05400473226370628 SGKNS(ph)QEDSEDSEDKDVK ddPTM_A549_PD325901_60min_R1 3 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 SGKNS(0.995)QEDS(0.005)EDSEDKDVK;S(0.008)GKNS(0.982)QEDS(0.01)EDS(0.001)EDKDVK;SGKNS(0.996)QEDS(0.004)EDSEDKDVK 192.58 6.1948e-41 227295000.0 25971.699999999997 27981.2 27532.4 28861.6 33713.7 29466.0 30451.0 31606.699999999997 31979.5 31112.5 32026.4 True False 28608.32786464498 30339.273924029952 29400.914229770868 30644.315482550584 31345.766017951002 29226.03866542118 31609.829468426567 30976.27957352351 30635.512826706887 29148.051440307536 28087.355832076646 1.018548276159672 1.0801755104829607 1.0467668941693007 1.0910359688452342 1.116009858861586 1.0405407629024346 1.1254113650786288 1.102854955757267 1.0907225660494593 1.0377641674272358 1.0 14.777633193849804 -10.682299153645133 0.947925990917705 1.0000544847654294 1.0805897433789569 0.31412709137582917 0.032747725529909344 0.38090379478281516 0.6096079875429855 0.0206311834818918 0.005460744606476964 2.0782646297245464e-11 10.682299153645133 0.0805352586135275 SGKNSQEDS(ph)EDS(ph)EDKDVK ddPTM_A549_MK2206_60min_R1 2 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 S(0.001)GKNS(0.021)QEDS(0.98)EDS(0.998)EDKDVK;S(0.003)GKNS(0.018)QEDS(0.98)EDS(1)EDKDVK 81.92200000000001 0.00017723 42841000.0 3394.0 4867.4 4998.3 4174.1 6666.4 4146.9 3485.9 3124.4 8446.8 8528.1 8404.3 True False 3966.8242246667883 5115.1298696536705 5707.134098873819 5196.754687382472 5685.78139092668 4585.722205510566 4119.24290777954 3567.293268073704 6533.61328676786 6601.596286977318 6317.280363119933 0.6279322741198843 0.809704425897515 0.903416307465452 0.8226253053008299 0.9000362599260399 0.7259013280907802 0.6520595368582245 0.5646881352455781 1.034244629209568 1.0450060639254215 1.0 12.625087885613539 -8.79152382615179 24.99118652112358 1.0161711490528265 0.7610944366217354 0.5853989053280921 0.10294030499370979 110.90109589847492 92125.171911509 0.0187779983157793 0.01999192841402413 1.6161295599915913e-09 8.79152382615179 -0.2550767124310911 SGKNSQEDS(ph)EDS(ph)EDKDVK ddPTM_A549_PD325901_60min_R1 4 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 S(0.017)GKNS(0.143)QEDS(0.84)EDS(1)EDKDVK;SGKNSQEDS(1)EDS(1)EDKDVK;SGKNSQEDS(1)EDS(1)EDKDVK;S(0.009)GKNS(0.164)QEDS(0.863)EDS(0.964)EDKDVK 137.16 1.7433e-13 218249000.0 21182.600000000002 21185.899999999998 26875.399999999998 25224.899999999998 28455.499999999996 45879.200000000004 36072.799999999996 38479.1 36438.1 35969.0 35296.3 True False 23333.04195819407 22971.310144922514 28699.326258908943 26782.984783095562 26456.883846145774 45505.57500640026 37445.57014379357 37711.60416422999 34906.73337390607 33697.91120149205 30955.078861680602 0.7537710390742413 0.7420853375165772 0.9271281907291774 0.8652210160010385 0.8546863655029108 1.470051981121966 1.2096745193612661 1.2182687155390617 1.1276577110296828 1.0886068600266694 1.0 14.917888514269407 -7.039959586797058 24.896657751911196 1.1148901428830489 0.8283584096700579 0.6338090137784596 0.12932880771933117 326.1165405705066 203185.09152654477 0.021459742989841 0.03717316907134341 9.120957103261837e-08 7.039959586797058 -0.28653173321299097 SGKNSQEDS(ph)EDSEDKDVK ddPTM_A549_MK2206_60min_R1 2 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 SGKNSQEDS(0.978)EDS(0.022)EDKDVK;SGKNS(0.001)QEDS(0.988)EDS(0.011)EDKDVK 152.88 3.7068e-18 20936300.0 2632.2 4522.0 4593.0 3266.8999999999996 5752.7 3412.6 3330.8 1635.51 6615.1 6603.9 6797.9 True False 3076.451008888605 4752.150484976357 5244.356464423398 4067.2906466567156 4906.485450555607 3773.7190668994563 3935.9632454264574 1867.3485510393111 5116.790412144017 5112.074403392259 5109.793817504496 0.6020695000157701 0.9300082654405802 1.0263342615621662 0.7959794058076273 0.9602120214219955 0.7385266806601706 0.7702782902791742 0.365444990097718 1.0013692518503492 1.000446316616524 1.0 12.319049363600914 -8.914510708337025 22.860958314497573 1.0007740148646207 0.7860846062847155 0.25654313848596644 0.1711385546632709 12.644732739411385 3378.078181585258 0.029597791323101134 0.03150909858585548 1.21755697134676e-09 8.914510708337025 -0.21468940857990515 SGKNSQEDS(ph)EDSEDKDVK ddPTM_A549_PD325901_60min_R1 1 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 SGKNS(0.001)QEDS(0.996)EDS(0.003)EDKDVK 135.68 2.5938e-13 24132000.0 1793.7 1360.7 1464.4 2384.8 1866.3 4075.1 3056.6 3408.5 2758.7 2440.1 2471.7 True False 1975.7951035478502 1475.3709643770658 1563.7829901525658 2532.103679726235 1735.217526385475 4041.9137366950963 3172.9205856357003 3340.51479358348 2642.761432637669 2286.0316695699303 2167.6965693972443 0.9114721734773263 0.6806169208392997 0.7214030839138135 1.168107988670351 0.8004891232853565 1.8646123234023486 1.4637291170867015 1.5410435393696973 1.219156532305867 1.0545902511648992 1.0 11.081947109406117 -6.495270110886835 1.8123845186368535 1.2119981355392329 0.7629900314622963 0.3654668864467655 0.28185744368503907 0.3662179463995552 2.3577444780412358 0.04519869992335023 0.12888437891019544 3.1969061648963347e-07 6.495270110886835 -0.4490081040769366 SGKPAELLK ddPTM_A549_MK2206_60min_R1 2 SGKPAELLK 9 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 78.908 0.010573 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGKPAELLK ddPTM_A549_PD325901_60min_R1 2 SGKPAELLK 9 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 91.03 0.0026359 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGKQGS(ph)PDQVS(ph)PVSEMTSTSLYQDK ddPTM_A549_PD325901_60min_R1 1 SGKQGSPDQVSPVSEMTSTSLYQDK 25 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.439)GKQGS(0.559)PDQVS(0.774)PVS(0.159)EMT(0.04)S(0.021)T(0.004)S(0.004)LY(0.001)QDK 63.033 9.155e-05 2377100.0 2487.9 2410.2 2731.9 2658.1 3482.5 3247.5 2543.2 3713.1 3127.0 3236.7 2906.0 True False 2740.4697765048218 2613.316012597634 2917.303162249245 2822.284800016898 3237.901213972787 3221.053436705195 2639.9828676924376 3639.0393076294 2995.583064435421 3032.3342096213237 2548.580422651774 1.0752926421891715 1.025400646324711 1.1446776944216728 1.1073948363302333 1.2704724501508105 1.26386179854341 1.0358640615098034 1.427869128745411 1.1753927942829228 1.1898130357864902 1.0 11.315478164109116 -4.034292215128511 15.997667237425532 1.1247810395210358 1.1356070844699857 0.0 0.12639145631083953 0.0 0.0 0.017607450973974807 0.0 9.24076199859162e-05 4.034292215128511 0.010826044948949898 SGKQGS(ph)PDQVSPVSEMTSTSLYQDKQEGK ddPTM_A549_MK2206_60min_R1 1 SGKQGSPDQVSPVSEMTSTSLYQDKQEGK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.441)GKQGS(0.559)PDQVSPVSEMTSTSLYQDKQEGK 107.52 2.4245000000000002e-15 3016200.0 717.73 1035.1 1029.7 969.97 1490.8 991.37 706.34 942.72 1606.3 1929.3 1545.9 True False 838.8652771862385 1087.782168730434 1175.7269434828586 1207.6126935436077 1271.5052948508187 1096.2761153818535 834.6728349869474 1076.3534469589176 1242.4756147340086 1493.4697900429576 1162.0103653304984 0.7219086010025813 0.9361208825543028 1.011804178828008 1.0392443385822459 1.0942288750489568 0.9434305821102131 0.7183006794862369 0.9262855814997671 1.0692465848879276 1.2852465301530986 1.0 10.182407222547567 -5.276725187185874 2.5166550032801163 1.0026894216330817 0.6662285361621545 0.29129431563888597 0.12948859629043064 0.40853735823526544 3.296203776646201 0.01477672076587779 0.2880803793007841 5.287797471228348e-06 5.276725187185874 -0.33646088547092723 SGKQGS(ph)PDQVSPVSEMTSTSLYQDKQEGK ddPTM_A549_PD325901_60min_R1 1 SGKQGSPDQVSPVSEMTSTSLYQDKQEGK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.465)GKQGS(0.535)PDQVSPVSEMTSTSLYQDKQEGK 119.96 2.7669000000000002e-21 4960300.0 1448.7 1630.2 1802.6 2084.9 2007.8 2115.3 1775.5 2598.7 2337.3 1857.4 2023.4 True False 1595.7709575234267 1767.5826751873974 1924.9352759143758 2213.6795378485513 1866.779054533973 2098.07369812548 1843.0676240908788 2546.866889859287 2239.0714091796963 1740.123447014133 1774.5346273894006 0.8992616615608333 0.9960823800816834 1.0847549809418127 1.247470465597618 1.0519823201648522 1.1823233346604527 1.038620264515379 1.4352308771827686 1.2617794967876717 0.9806083353662749 1.0 10.793225011371764 -5.670187115920251 2.1352796525740794 1.1483391131017555 0.9050794063891088 0.27802300647450784 0.12762804261031196 0.38332297389501757 3.123030614702544 0.01915781537896713 0.12928317644757029 2.1370411462419694e-06 5.670187115920251 -0.24325970671264674 SGKYDLDFK ddPTM_A549_MK2206_60min_R1 2 SGKYDLDFK 9 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 64.878 0.006139899999999999 33979000.0 9576.4 10580.9 10430.4 9106.7 14238.400000000001 10698.7 10149.099999999999 10029.2 15818.900000000001 14362.4 14959.6 False True 11192.662199498838 11119.422615322044 11909.58756074936 11337.841908815293 12143.950221494424 11830.829332777708 11993.060097921707 11450.869813136855 12235.944407592486 11117.923864879993 11244.718456043807 0.9953706038307264 0.9888573607946209 1.059127234470526 1.0082815281801416 1.0799692556968643 1.0521232149141875 1.0665505005575022 1.0183331719596986 1.0881503574699032 0.9887240759597974 1.0 13.456959919086316 -5.753688840767566 24.939705889757754 1.0444186472471675 0.9921139550235677 0.24665468084930242 0.03165766865787035 171.58871167605633 552123.6906043182 0.004644646270426414 0.017322244071949724 1.7632389028103962e-06 5.753688840767566 -0.05230469222359979 SGKYDLDFK ddPTM_A549_PD325901_60min_R1 2 SGKYDLDFK 9 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 61.435 0.007716 59345000.0 19319.3 19585.2 18561.7 19074.0 21537.3 20218.1 19801.0 20538.3 21800.9 23291.1 21618.7 False True 21280.581113883018 21235.713538265372 19821.40858256957 20252.157659802997 20024.594347651437 20053.45049688968 20554.537890522945 20128.64749451534 20884.68398767193 21820.49597111602 18959.73695223053 1.12240909077483 1.12004262462972 1.0454474464761847 1.0681665948651475 1.0561641439490346 1.057686113864068 1.0841151405375797 1.061652255262291 1.1015281509596544 1.1508860078646257 1.0 14.210651327944635 -10.87089960815881 1.0084023434542604 0.9978756217152611 1.0794764957365854 0.0 0.05082473670123922 0.34012564308678545 0.5871422184814499 0.020660104168062028 0.004493248621114711 1.3461715001151779e-11 10.87089960815881 0.08160087402132432 SGKYDLDFKS(ph)PDDPSR ddPTM_A549_MK2206_60min_R1 2 SGKYDLDFKSPDDPSR 16 2 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 SGKYDLDFKS(0.997)PDDPS(0.003)R;SGKYDLDFKS(1)PDDPSR 73.758 0.00018889 13432400.0 6717.1 7164.9 7082.0 6391.200000000001 10229.8 7247.5 8345.8 8217.7 11291.4 10287.9 10404.5 True False 7850.782262672155 7529.562806237746 8086.334091235903 7957.0442869118715 8725.009971334113 8014.425639498857 9862.123830215001 9382.584140650773 8733.915928660634 7963.856244743141 7820.77550040829 1.0038368013839931 0.9627642176718484 1.0339555317517743 1.0174239481105765 1.1156195406553502 1.0247609893776464 1.261016101242152 1.1996999709505722 1.1167582969495382 1.0182949560855419 1.0 12.933095955509463 -6.416910757774577 1.7500410997296676 1.0843631051008955 0.9893996413174859 0.25519740041340677 0.07680138264602646 0.5280918434000407 3.11964691449843 0.013051290334198577 0.04024083497851018 3.82903417220962e-07 6.416910757774577 -0.09496346378340959 SGKYDLDFKS(ph)PDDPSR ddPTM_A549_PD325901_60min_R1 2 SGKYDLDFKSPDDPSR 16 2 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 S(0.003)GKYDLDFKS(0.985)PDDPS(0.012)R;SGKYDLDFKS(0.996)PDDPS(0.004)R 79.467 0.00010814 10900000.0 3424.1 2898.9 3229.3 3859.2 3527.1 2805.3 3580.6 3292.6 3281.3 3975.9 3929.6 True False 3771.712111310808 3143.2004766904342 3448.4597173584275 4097.574019120882 3279.3686638344343 2782.4545668942515 3716.861692379503 3226.926510005267 3143.398372028124 3724.860995468661 3446.284111786789 1.09442866257341 0.9120549480932914 1.0006312902538121 1.18898323127411 0.9515665445627424 0.8073781721529736 1.0785128479881563 0.9363495304895824 0.9121123709090752 1.0808339865912677 1.0 11.750825926959092 SGKYDLDFKSPDDPSR ddPTM_A549_MK2206_60min_R1 2 SGKYDLDFKSPDDPSR 16 2 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 79.013 0.00011625 16670300.0 5655.200000000001 7521.2 7979.2 6715.6 10487.0 6148.299999999999 6301.4 5677.1 11086.8 11070.4 10841.3 False True 6609.6595036345425 7903.9969543574 9110.770542331193 8360.922301474742 8944.376192044896 6798.909025088761 7446.282813357231 6481.846310389583 8575.657501981572 8569.588951273292 8149.106005341569 0.8110901366729122 0.969921970480749 1.1180085933793564 1.0259925807805583 1.0975898688987533 0.8343134842806338 0.9137545650377291 0.7954058158208849 1.0523433486274945 1.0515986594917412 1.0 12.992426082361124 SGKYDLDFKSPDDPSR ddPTM_A549_PD325901_60min_R1 2 SGKYDLDFKSPDDPSR 16 2 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 94.01 2.3865e-06 36032000.0 10192.8 8489.1 11729.9 10810.0 11037.0 16352.6 13198.1 13886.3 14176.6 13562.0 12794.9 False True 11227.565552457234 9204.506249499043 12525.961551618799 11477.709148708738 10261.79919558296 16219.429847287252 13700.360917777436 13609.32685290839 13580.806802454483 12705.693005494604 11221.208413553739 1.0005665289039474 0.8202776305608239 1.1162756353842507 1.0228585661812661 0.9145003655032431 1.4454263078917884 1.2209345386749264 1.2128218594059905 1.210280239163071 1.1322927564688847 1.0 13.453940427899537 -5.7796575822528 23.50170495040414 1.1233340146608106 0.9104221937455746 0.28294406968729235 0.13952427439868 112.61157366365804 145271.67315956735 0.020706387324750886 0.06460552912107809 1.6608959180711328e-06 5.7796575822528 -0.21291182091523597 SGLEELVLS(ph)EMNSPSR ddPTM_A549_MK2206_60min_R1 2 SGLEELVLSEMNSPSR 16 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 SGLEELVLS(0.479)EMNS(0.479)PS(0.042)R;SGLEELVLS(0.469)EMNS(0.469)PS(0.062)R 48.74100000000001 0.011724 1383600.0 784.43 766.4 857.8 750.27 1419.6 1006.1 979.45 834.85 1531.2 1358.0 1182.4 True False 916.8226065278046 805.4064864409286 979.4489386419315 934.0861836809006 1210.7787205327481 1112.5648342048707 1157.4033867938456 953.1925441208971 1184.3856448239515 1051.2268568280397 888.7774474201321 1.0315547600685409 0.9061959085244504 1.1020182178170619 1.050978719579673 1.3622968540069216 1.25179237775928 1.302242074383703 1.0724760702330416 1.3326009208063119 1.182778500826559 1.0 9.795678398819534 -6.203710459094814 2.0538331782759522 1.1828658491840371 0.9779066044669067 0.36662863983949034 0.11428548003969367 0.36787110077783675 2.9648720675246696 0.020747308404973464 0.07048090165142175 6.255896297351789e-07 6.203710459094814 -0.20495924471713045 SGLEPAS(ph)SPSKGSEPR ddPTM_A549_PD325901_60min_R1 1 SGLEPASSPSKGSEPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.496)S(0.496)PS(0.007)KGSEPR 144.72 6.7428e-15 99891000.0 9956.3 9947.8 8724.5 10653.0 11231.0 10167.0 9906.4 11758.0 10176.0 10278.0 11238.0 True False 10967.056246559327 10786.136017807135 9316.597034680457 11311.01161528161 10442.173304846621 10084.203322858104 10283.39347299008 11523.477466027438 9748.338107993224 9629.04532594555 9855.797243551497 1.1127518125167308 1.094395080505978 0.9452910611342141 1.1476505995171764 1.0594955483361614 1.023174794860563 1.0433852502108192 1.1692080489548504 0.989096860162319 0.9769930415569062 1.0 13.266756861440477 SGLEPASS(ph)PSKGSEPR ddPTM_A549_MK2206_60min_R1 2 SGLEPASSPSKGSEPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.184)S(0.81)PS(0.004)KGS(0.002)EPR;SGLEPAS(0.215)S(0.778)PS(0.006)KGS(0.001)EPR 89.01100000000001 3.3070999999999996e-06 111312000.0 9098.5 13603.5 10040.8 10815.8 12776.4 10200.2 9204.5 9312.2 16928.4 15125.9 14241.9 True False 10634.10436303205 14295.860044753614 11464.736422378055 13465.671485539711 10897.008484794746 11279.578393655229 10876.838505022157 10632.232867416446 13094.144429099908 11708.948684606215 10705.24317355614 0.9933547693059587 1.3354073151805592 1.0709459128119572 1.2578575999844936 1.0179132139391565 1.0536498994733532 1.0160290923507358 0.993179948838524 1.2231524512628336 1.093758310276352 1.0 13.386029946996265 -6.770762792636537 24.965357108818452 1.0831138422762325 1.1699321523624975 0.16901248131464852 0.10463379221150246 332.107507221592 889288.4177049953 0.01655885764072657 0.03158577946907633 1.6952634838227184e-07 6.770762792636537 0.08681831008626495 SGLEPASS(ph)PSKGSEPR ddPTM_A549_PD325901_60min_R1 1 SGLEPASSPSKGSEPR 16 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SGLEPAS(0.166)S(0.817)PS(0.017)KGS(0.001)EPR 141.97 8.737399999999999e-15 107210000.0 7058.4 7492.5 7055.4 7663.4 7976.3 7667.8 7627.2 7897.4 7428.6 6877.0 7855.5 True False 7774.963571880549 8123.919269931038 7534.221871566793 8136.750813155823 7416.072204741179 7605.355979050992 7917.457269763982 7739.880161609554 7116.401775652369 6442.7850463638415 6889.323300117346 1.1285525781244898 1.1792042434403773 1.0936084058413202 1.1810667693614016 1.0764587292070995 1.103933673561444 1.1492358428917284 1.1234601461478402 1.0329609260072257 0.9351840181827584 1.0 12.750146566646782 -8.810591628542454 3.0877798639043452 1.01361378176659 1.1305241579939782 0.712647331331621 0.03894493623477982 0.08739785026644417 1.6320292462569006 0.005480144626577597 0.005865319406473528 1.5467081411456525e-09 8.810591628542454 0.1169103762273882 SGLLSTFGGS(ph)TGR ddPTM_A549_MK2206_60min_R1 2 SGLLSTFGGSTGR 13 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 SGLLSTFGGS(0.932)T(0.068)GR;SGLLSTFGGS(0.916)T(0.084)GR 91.712 0.00018094 10910500.0 7544.8 7257.5 7902.4 7545.4 10960.0 8519.3 8399.9 9100.5 11761.3 12230.0 11070.900000000001 True False 8818.177787350029 7626.875750711169 9023.079147498242 9394.023338725872 9347.798518624208 9420.806671346338 9926.053099933255 10390.523744112379 9097.38432893674 9467.23450589611 8321.689988703942 1.0596618955188226 0.9165056329981133 1.0842844614190605 1.1288600454327835 1.1233053059310225 1.1320785422353348 1.1927929439100848 1.2486074052526255 1.0932135589388385 1.137657677556741 1.0 13.022660828741687 -5.83955178020934 11.131002806831578 1.0872761545666076 0.9881943481867763 0.2178038334552127 0.07546214540163837 0.5892283273111997 80.41089018166109 0.01250347925381443 0.03893916551778108 1.4469323274733575e-06 5.83955178020934 -0.09908180637983133 SGLLSTFGGS(ph)TGR ddPTM_A549_PD325901_60min_R1 1 SGLLSTFGGSTGR 13 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 SGLLSTFGGS(0.979)T(0.021)GR 120.53 1.0414e-05 9640200.0 2782.6 3106.2 3597.6 3908.5 4360.4 4097.9 3866.5 4141.7 4362.4 3808.1 4445.0 True False 3065.0875035581453 3367.970375209848 3841.7547701262424 4149.919168152457 4054.1405465633698 4064.5280610544146 4013.6417733299845 4059.0905443992024 4179.063498654645 3567.655916105586 3898.293179176578 0.7862639782792253 0.8639602565554733 0.9854966246888907 1.0645477334336944 1.039978359816362 1.0426429912367314 1.0295895123459573 1.0412481457478755 1.0720239106124319 0.9151840952247642 1.0 11.928626880193407 -5.703611230470285 2.120644929373903 1.0376777813072655 0.7881842446354409 0.7776336436320392 0.04136466173620839 0.07128452509737038 0.5819633397857297 0.003775239444445482 0.024011901787434124 1.9787401661056716e-06 5.703611230470285 -0.2494935366718246 SGLLSTFGGST(ph)GR ddPTM_A549_PD325901_60min_R1 1 SGLLSTFGGSTGR 13 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 SGLLSTFGGS(0.273)T(0.727)GR 112.33 3.659e-05 15783000.0 8437.9 7709.0 9955.4 9450.7 11273.0 8959.9 10689.0 9747.4 10796.0 11837.0 10421.0 True False 9294.509396346331 8358.664484737856 10631.03331068345 10034.448274903014 10481.223369738758 8886.933545045375 11095.775744245231 9552.980460312627 10342.281664101305 11089.609799884944 9139.283064161778 1.016984519583735 0.9145864534511473 1.1632239898960268 1.0979469838560403 1.1468321197796336 0.9723884775923013 1.2140750720103552 1.0452658477964312 1.1316294277673586 1.2134004081098064 1.0 13.157865281417395 -5.751173843113653 24.98132785320272 1.0794172631828238 0.9657854898511817 0.2551749822601028 0.08251352397686605 212.63155986853624 517430.96140506305 0.010165910092147873 0.03850207992776331 1.7734794352551677e-06 5.751173843113653 -0.1136317733316421 SGLNGS(ph)ILAER ddPTM_A549_MK2206_60min_R1 2 SGLNGSILAER 11 0 Q96H22-5;Q96H22-4;Q96H22;Q96H22-3 Q96H22-5 CENPN Centromere protein N 1 S(0.011)GLNGS(0.989)ILAER;S(0.044)GLNGS(0.956)ILAER 105.03 0.00018293 23942000.0 3524.8 4006.7999999999997 2860.9 3305.4 4830.9 3673.8 3935.2000000000003 3790.8 4559.6 5011.3 5412.5 True False 4119.70006691382 4210.729005573475 3266.618639030895 4115.223148385046 4120.281009454535 4062.559077528928 4650.174901946139 4328.157508838111 3526.857880185013 3879.243849500997 4068.426872599344 1.0126027076115829 1.0349771883409111 0.8029193448286884 1.0115023023028564 1.0127455005285768 0.9985577238440894 1.142990902273515 1.0638405566505424 0.8668849141515185 0.9534997115537494 1.0 11.990255344062195 -8.754215922559185 24.99873205459618 0.9371400976703863 1.0081367148065112 0.1261766779823762 0.08169913505987322 277.94403372563227 961899.0364392087 0.015473391053312172 0.01737225082110219 1.7611002447781456e-09 8.754215922559185 0.07099661713612493 SGLNGS(ph)ILAER ddPTM_A549_PD325901_60min_R1 2 SGLNGSILAER 11 0 Q96H22-5;Q96H22-4;Q96H22;Q96H22-3 Q96H22-5 CENPN Centromere protein N 1 S(0.004)GLNGS(0.996)ILAER;S(0.141)GLNGS(0.859)ILAER 103.14 0.00021768 37923000.0 7912.5 9212.0 8824.7 8848.900000000001 10885.1 8966.0 9526.7 10400.5 9719.400000000001 10539.4 11767.1 True False 8715.77117512536 9988.327569516809 9423.597209232006 9395.476455689988 10120.56812755641 8892.98386866783 9889.243781710276 10193.053868465584 9310.927418123953 9873.94048533474 10319.821297792738 0.8445660950533648 0.9678779584732895 0.9131550767499801 0.9104301503456795 0.9806921879278137 0.8617381650368221 0.9582766499867051 0.9877161216585923 0.9022372722786806 0.9567937467528275 1.0 13.333130368234997 -10.945806182135062 0.9629084342449229 1.004496313443698 0.9258877983912527 0.14471316752494956 0.04572440633231919 0.653010714152402 0.9676298858429759 0.038592336933924755 0.007125807288826648 1.132905846063368e-11 10.945806182135062 -0.07860851505244526 SGLNGS(ph)ILAEREEPLR ddPTM_A549_MK2206_60min_R1 1 SGLNGSILAEREEPLR 16 1 Q96H22-5;Q96H22-4;Q96H22;Q96H22-3 Q96H22-5 CENPN Centromere protein N 1 SGLNGS(1)ILAEREEPLR 139.0 1.9705e-11 22765000.0 922.35 1136.4 1152.9 1112.8 1218.6 829.25 1105.8 1242.6 1650.6 1869.0 1648.9 True False 1078.0201307075467 1194.2379060431515 1316.3985560273754 1385.436049955491 1039.3455542696588 917.0006845883994 1306.7095462929547 1418.7423553029014 1276.741735466571 1446.7916019231263 1239.4326226751143 0.8697690467278609 0.9635359633068095 1.0620977146673312 1.1177985996247637 0.8385655946560451 0.7398552110151838 1.054280420239895 1.144670819008117 1.0301017676224553 1.1673015341491184 1.0 10.27546413125854 SGLQLSLEQGT(ph)GENSFR ddPTM_A549_MK2206_60min_R1 1 SGLQLSLEQGTGENSFR 17 0 E9PHV6;P23497-7;P23497-6;P23497-5;P23497-2;P23497-3;P23497;P23497-4;C9JBL0 E9PHV6 SP100 Nuclear autoantigen Sp-100 1 SGLQLS(0.004)LEQGT(0.558)GENS(0.438)FR 50.608000000000004 0.020066 1229200.0 1311.1 1289.5 1047.6 1123.5 1265.1 1395.4 1212.2 1120.9 1666.5 1808.7 1814.5 True False 1532.381626682565 1355.1300421001788 1196.1654326431415 1398.7575504358324 1079.005465867836 1543.0603018084455 1432.4410490290472 1279.7910076122816 1289.0404108536536 1400.1134138032949 1363.9095723476235 1.1235214252840529 0.993562967497667 0.8770122718504327 1.0255500648977975 0.7911121732290525 1.1313508850535154 1.0502463492234784 0.9383254092200899 0.9451069462287726 1.026544165529505 1.0 10.41353228104008 -2.2943548500093347 0.0012187052940835627 0.028366355319026343 1.9484276443701847 0.0 0.0965028635477719 4880709.036659582 500.9827085191816 388267.2904621686 401128.54059101123 0.005077444091141138 2.2943548500093347 1.9200612890511584 SGLQLSLEQGT(ph)GENSFR ddPTM_A549_PD325901_60min_R1 1 SGLQLSLEQGTGENSFR 17 0 E9PHV6;P23497-7;P23497-6;P23497-5;P23497-2;P23497-3;P23497;P23497-4;C9JBL0 E9PHV6 SP100 Nuclear autoantigen Sp-100 1 SGLQLS(0.001)LEQGT(0.64)GENS(0.36)FR 67.605 0.0020448 2231200.0 1236.0 1739.8 1171.3 1437.2 1615.4 1394.0 1429.0 1561.2 1748.5 1601.6 2129.9 True False 1361.4778101048912 1886.419051828631 1250.7914615990849 1525.9725798819782 1501.9398768274632 1382.6477261792268 1483.3813769788042 1530.0606412622922 1675.016625572539 1500.474702669234 1867.935802548524 0.7288675597134306 1.009895013123518 0.6696115893771958 0.8169298847422983 0.8040639698528648 0.7402008807223498 0.794128671314586 0.8191184296455741 0.8967206599323301 0.8032795884216453 1.0 10.867229157837924 -9.257148154515038 0.8442649503665266 0.980004932389533 0.7957324927119989 0.08183043008408464 0.09689970897329621 0.31121823389162406 0.4738822292415813 0.022127113768735666 0.017323241520086918 5.531613724516381e-10 9.257148154515038 -0.18427243967753415 SGLQLSLEQGTGENS(ph)FR ddPTM_A549_MK2206_60min_R1 1 SGLQLSLEQGTGENSFR 17 0 E9PHV6;P23497-7;P23497-6;P23497-5;P23497-2;P23497-3;P23497;P23497-4;C9JBL0 E9PHV6 SP100 Nuclear autoantigen Sp-100 1 SGLQLSLEQGT(0.081)GENS(0.919)FR 84.65299999999999 9.6496e-05 1385000.0 1205.8 1040.3 1250.1 1109.3 1875.3 1214.2 881.71 1242.8 1531.5 1398.9 1827.3 True False 1409.3095610203934 1093.2468265194384 1427.382977612821 1381.0785497983688 1599.4458541948886 1342.685838079271 1041.9052939608985 1418.9707059153754 1184.6176953029528 1082.8875184217552 1373.5309790855938 1.0260486166526936 0.795938965459119 1.0392069777436532 1.0054950130923146 1.1644774515822671 0.9775431777833963 0.7585597338725699 1.0330824186142729 0.8624615777443863 0.7883968653860798 1.0 10.423673734478214 -7.534052148950565 24.997452579694933 0.9275743588812598 1.003808154302899 0.16642545468300807 0.11254421341622362 405.85849452982734 907995.4166643431 0.016445904621735636 0.0244042593744236 2.923801274319974e-08 7.534052148950565 0.0762337954216391 SGLQLSLEQGTGENS(ph)FR ddPTM_A549_PD325901_60min_R1 1 SGLQLSLEQGTGENSFR 17 0 E9PHV6;P23497-7;P23497-6;P23497-5;P23497-2;P23497-3;P23497;P23497-4;C9JBL0 E9PHV6 SP100 Nuclear autoantigen Sp-100 1 SGLQLS(0.001)LEQGT(0.072)GENS(0.927)FR 68.243 0.0017779 2373700.0 1398.9 1483.2 1505.1 2202.0 2004.5 1743.2 1608.2 2229.9 2188.2 1758.6 2010.1 True False 1540.9152981842492 1608.1944692908532 1607.2451369015473 2338.012538895156 1863.7108351495917 1729.0039571561172 1669.4009310408064 2185.42289517729 2096.237563670477 1647.561695875446 1762.8704430737553 0.8740944657835982 0.9122590236902448 0.9117205085696154 1.3262531844476206 1.0572023840277283 0.9807890103037928 0.9469787967685392 1.239695692762747 1.189104719468471 0.9345903451661167 1.0 10.783710736629837 -6.045093316880414 24.887806338979594 1.0951600506903572 0.8978796565088042 0.32253376122899347 0.11878550551427255 325.9112190253466 179875.9490986652 0.016365229299412556 0.043300722337534396 9.013774377744317e-07 6.045093316880414 -0.19728039418155296 SGLS(ph)DIILGK ddPTM_A549_MK2206_60min_R1 1 SGLSDIILGK 10 0 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;K7EJR2;M0R330;M0QX30;M0R1V5 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.026)GLS(0.974)DIILGK 84.65799999999999 0.00088945 7443200.0 934.57 1074.0 840.65 844.01 1663.4 1459.8 720.33 1033.5 1322.3 1407.9 1417.5 True False 1092.3025679572304 1128.6620125751006 959.8668107593136 1050.7924878890492 1418.7160634926554 1614.2750670631856 851.2046368974541 1180.0017899610075 1022.8011612791995 1089.8544121709842 1065.495628990221 1.025159126173436 1.0592835689478548 0.9008641468280704 0.9862006556375027 1.3315081027945506 1.5150461655042617 0.7988813972931524 1.1074675088806372 0.9599299456990891 1.0228614576334287 1.0 10.057308959390337 SGLS(ph)DIILGK ddPTM_A549_PD325901_60min_R1 2 SGLSDIILGK 10 0 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;K7EJR2;M0R330;M0QX30;M0R1V5 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.001)GLS(0.999)DIILGK;S(0.006)GLS(0.994)DIILGK 104.79 0.00033623 16689900.0 3170.1 3142.3 3074.7 3158.2 3444.1 3605.5 3949.1 3578.3 3689.5 3544.7 3661.7 True False 3491.9262182957227 3407.112648902808 3283.367631673104 3353.2748412073943 3202.1982974999796 3576.1380033997143 4099.385161530439 3506.9279993779537 3534.4431455818594 3320.8870370577133 3211.3341134287675 1.087375556375031 1.060964860260213 1.022431025766866 1.0441999252538303 0.9971551337836244 1.1135988586318235 1.27653648506648 1.0920470668913296 1.1006152025109919 1.0341144582778947 1.0 11.648957058324513 -4.929655238626143 16.575342227774605 1.065548175905275 1.4072472253327655 0.0 0.07450132134022955 20768833.427237723 78957319.2167812 0.011097899251193562 249461432.4052074 1.1758306087342263e-05 4.929655238626143 0.3416990494274905 SGLS(ph)LEELR ddPTM_A549_MK2206_60min_R1 2 SGLSLEELR 9 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 S(0.001)GLS(0.999)LEELR;S(0.01)GLS(0.99)LEELR 94.69200000000001 0.00094091 27677000.0 597.24 780.01 597.78 613.4300000000001 916.3199999999999 515.21 587.94 580.6500000000001 1066.1 1123.24 1090.9299999999998 True False 698.0395108839108 819.7091773079178 682.5541927504942 763.7203775379189 781.5305418417637 569.7291802312806 694.7610875813712 662.9589156660468 824.6300522118695 869.4993038759404 820.0219728637048 0.851244886092743 0.9996185522264791 0.8323608578034297 0.931341357684395 0.9530604882604301 0.6947730659480448 0.8472469160248305 0.8084648187546026 1.0056194583811848 1.06033659176162 1.0 9.67951875769665 -8.776630084658319 24.94838507800579 1.0026536528251182 0.8670911381818823 0.43908773092875386 0.07828105355816051 168.3615373039349 276506.83619093 0.013155682654934801 0.014031411553461359 1.6725145914033035e-09 8.776630084658319 -0.13556251464323588 SGLS(ph)LEELR ddPTM_A549_PD325901_60min_R1 2 SGLSLEELR 9 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 S(0.037)GLS(0.963)LEELR;SGLS(1)LEELR 113.69 0.00022774 52530000.0 2838.8 3058.4 3127.1000000000004 3787.3 3619.6000000000004 3348.8999999999996 3439.9 3645.9 3331.7 3678.9 3748.1 True False 3126.9928861858953 3316.142101455732 3339.3238107799007 4021.232919417632 3365.371782942112 3321.627668724255 3570.807276885506 3573.1796643467796 3191.680235298843 3446.613626155 3287.1074611634917 0.9512901306485055 1.0088328844235481 1.0158851970108476 1.22333479112797 1.0238094807374865 1.0105016973033625 1.0863068272254162 1.087028552173354 0.9709692405885411 1.0485247795747603 1.0 11.682602906019 -8.771468121230944 24.977100088836846 0.9862910268492134 1.0529879862276086 0.055251302635273336 0.06869424538756927 261.68384378182196 651734.9790280802 0.01151609184271681 0.01233145936123053 1.6925124763490986e-09 8.771468121230944 0.06669695937839515 SGLS(ph)VR ddPTM_A549_PD325901_60min_R1 2 SGLSVR 6 0 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 SGLS(1)VR;SGLS(1)VR 89.12299999999999 0.022281 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGLTVPT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 SGLTVPTSPK 10 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 SGLT(0.001)VPT(0.5)S(0.5)PK 97.45200000000001 0.0005459 76741000.0 4913.3 4496.4 4268.8 4280.9 6127.6 4475.0 4836.7 4574.7 6508.7 6128.9 5968.5 True False 5742.544921348065 4725.2475543227965 4874.1800294645345 5329.720692176902 5226.238157182635 4948.541529735413 5715.465782741123 5223.177734431176 5034.48984225813 4744.377233294089 4486.3567277799875 1.280001852235608 1.0532482905480012 1.0864450433205868 1.1879841518563865 1.1649181004312976 1.10302007397083 1.2739659660477654 1.164235938281215 1.1221777820484147 1.0575122579790437 1.0 12.131328623975639 -10.035564034722402 0.7590981122950834 1.0070514659272658 1.1586534477515325 0.3467440002758245 0.06864442553166461 0.42614662390715985 0.4916916704323465 0.032357377120846735 0.013732551021360529 9.213740263597429e-11 10.035564034722402 0.15160198182426665 SGLTVPT(ph)SPK ddPTM_A549_PD325901_60min_R1 3 SGLTVPTSPK 10 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 SGLTVPT(0.5)S(0.5)PK;SGLT(0.001)VPT(0.5)S(0.5)PK;SGLTVPT(0.5)S(0.5)PK 141.08 5.5025000000000005e-08 188500000.0 31890.7 33141.8 30677.1 32703.1 35618.7 31600.5 33637.7 34127.2 38684.2 35968.1 36096.5 True False 35128.22038730748 35934.775797157214 32759.032482388182 34723.09621287108 33116.96538984423 31343.156005112392 34917.80108075574 33446.50622372953 37058.43760192922 33697.06802764563 31656.85933456633 1.1096558889829842 1.1351339505091018 1.0348162506006522 1.0968585305920322 1.0461228967740208 0.9900905100490686 1.1030090102030041 1.0565326733852298 1.1706290005043194 1.0644476026985907 1.0 14.950230512876743 -5.742414984546775 24.96017123899024 1.0724370847852103 1.1223949411265117 0.16105163602325134 0.04857038826861731 494.7504215243637 649105.7010734505 0.008877190725848649 0.03426021013541206 1.8096101163826722e-06 5.742414984546775 0.049957856341301454 SGLTVPTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SGLTVPTSPK 10 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 SGLTVPT(0.074)S(0.926)PK 160.91 8.8653e-09 82268000.0 6428.7 6192.9 6494.2 5884.6 8748.9 6534.8 6657.5 6618.9 8494.4 8102.3 9232.9 True False 7513.707393375191 6508.092157985419 7415.17521255354 7326.32726416973 7461.948399597747 7226.308198550828 7867.081573924175 7557.1493445311235 6570.43196276944 6271.984802708266 6940.116114923322 1.0826486573068246 0.9377497508998557 1.068451174269073 1.0556490904260145 1.0751907138199503 1.0412373624429867 1.133566275210814 1.0889081997174364 0.9467322814154434 0.9037290873594501 1.0 12.760744085365143 -8.762292607454054 24.999976933874855 0.9748457978858633 1.0587349363032617 0.46076737416036884 0.051240096607442644 17.2652985768371 505883.58116388787 0.00837318653755153 0.00917269829558499 1.728651281813413e-09 8.762292607454054 0.08388913841739831 SGLTVPTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SGLTVPTSPK 10 0 Q53EL6;Q53EL6-2;Q5VZS7 Q53EL6 PDCD4 Programmed cell death protein 4 1 SGLTVPT(0.074)S(0.926)PK 145.28 4.0913000000000004e-08 89933000.0 5306.0 4994.2 5937.8 6013.9 6067.9 5781.9 6774.6 6316.6 6649.6 6045.5 6215.6 True False 5844.661213929251 5415.078761146425 6340.774814892036 6385.364944442134 5641.711637118583 5734.8141233828355 7032.411110203365 6190.610457723159 6370.140436606898 5663.786098268514 5451.120603934742 1.0721944419484029 0.993388177329575 1.1632057471476822 1.1713857403619055 1.0349636427134392 1.052043155905103 1.2900854009957534 1.1356583182648055 1.1685928269517258 1.039013169912305 1.0 12.412337124378087 -4.225722611345607 16.69407992352376 1.0972672785129018 0.3107112148534982 0.0 0.08727303338456663 0.0 0.0 0.012431301300303978 0.0 5.9467186079001307e-05 4.225722611345607 -0.7865560636594037 SGMNS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 SGMNSPLR 8 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 SGMNS(1)PLR 74.533 0.0050076 17554000.0 1361.0 1592.9 1294.3 1468.1 2245.0 1620.8 1401.4 1373.2 2610.3 2371.1 2476.3 True False 1590.703526744696 1673.9718061740016 1477.8512022432406 1827.7845659055142 1914.7634739335176 1792.311980200034 1656.0162399845783 1567.8553052486263 2019.0712177925539 1835.4668631995323 1861.3663675968144 0.8545891633351217 0.8993241928698027 0.7939604088534569 0.9819585212906489 1.028687048002078 0.9629012382522332 0.8896777489982475 0.8423141905550081 1.0847253141246718 0.9860857567601157 1.0 10.862146329685414 -6.520896814174784 0.32944618856700203 1.037586788501576 0.7969902499558903 0.19730956846484338 0.07599769631862244 2.7722574960018003 0.379110686888449 0.03406090075259679 0.2408459197621752 3.0137219818204446e-07 6.520896814174784 -0.24059653854568563 SGMS(ph)PEQSR ddPTM_A549_MK2206_60min_R1 4 SGMSPEQSR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)GMS(0.997)PEQSR;S(0.017)GMS(0.983)PEQSR;S(0.06)GMS(0.94)PEQSR;S(0.047)GMS(0.952)PEQSR 109.16 0.00014714 2805760000.0 9039.3 10332.5 10047.400000000001 7350.8 12112.400000000001 9489.3 8357.5 9514.3 14428.099999999999 13261.699999999999 14563.2 True False 10564.912850333087 10858.380116324231 11472.272401621516 9151.74632998995 10330.682005199258 10493.451427512457 9875.94956876775 10862.98116132174 11160.158386941248 10265.872759349342 10946.755516127254 0.9651181881945186 0.9919267951428327 1.04800663399489 0.8360236342637949 0.9437209034201623 0.9585900965864297 0.902180518621984 0.9923471064387898 1.0194946229044395 0.9378004966152022 1.0 13.418215715641573 -8.50436254238724 21.654026008889456 1.0090329161744527 0.9503391234470232 0.06074559231769172 0.0541472386335562 147.08176940770613 172006.73114732865 0.008146193024125567 0.009741278220435435 3.130671196778984e-09 8.50436254238724 -0.05869379272742947 SGMS(ph)PEQSR ddPTM_A549_PD325901_60min_R1 4 SGMSPEQSR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.003)GMS(0.997)PEQSR;S(0.003)GMS(0.997)PEQSR;S(0.261)GMS(0.739)PEQSR;S(0.027)GMS(0.973)PEQSR 126.03 6.650699999999999e-05 3429640000.0 11125.1 11733.599999999999 12322.1 12103.499999999998 13962.3 12231.6 11941.5 12732.7 12443.1 13280.5 14559.199999999999 True False 12254.51196213424 12722.43165107278 13158.351804806696 12851.105705957096 12981.636215320095 12131.989904974062 12395.940317139532 12478.736309890082 11920.159779045855 12441.966963535684 12768.510698372913 0.9597448168873625 0.9963911964058577 1.0305314469042548 1.0064686485006202 1.0166914937835578 0.9501491749166986 0.9708211560428219 0.9773055452332623 0.9335591331387486 0.9744258557202885 1.0 13.640302640426244 -7.2572376390939635 24.906344782682396 0.9676462234521165 1.0034930056179785 0.36519164923817593 0.022447234354104815 362.6523251647099 2149667.0929086483 0.004220209881061506 0.007143249273694682 5.530474075837205e-08 7.2572376390939635 0.03584678216586201 SGNFGGSR ddPTM_A549_MK2206_60min_R1 1 SGNFGGSR 8 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 66.568 0.023319 10602000.0 3165.7 3161.4 3018.0 2956.8 3678.6 2817.6 2714.3 3043.0 3852.0 4528.0 4723.6 False True 3699.992766065897 3322.3017565688283 3445.9977813258884 3681.216132735794 3137.4828130119527 3115.756561828491 3207.4531755317125 3474.354568796657 2979.528150380001 3505.1216551674233 3550.5997552721014 1.0420754298120958 0.9357015674987627 0.9705396324125537 1.0367871307572043 0.8836486873388832 0.8775296503645802 0.9033553192722248 0.9785261105923776 0.8391619319963773 0.9871914315216324 1.0 11.793847025018552 -6.766975361262741 24.999511072661505 0.9191058690583179 0.9901108919022842 0.2836072011764136 0.05440386178236382 164.03140708120114 740740.9010269672 0.009429498403585706 0.018184998337162743 1.7101123317805429e-07 6.766975361262741 0.07100502284396626 SGNFGGSR ddPTM_A549_PD325901_60min_R1 1 SGNFGGSR 8 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 80.688 0.010697 5360300.0 2333.1 2876.7 2469.5 2642.9 2934.0 2657.2 2734.3 3026.2 2434.8 3174.2 3282.9 False True 2569.954594462558 3119.129604779529 2637.0951203098607 2806.1459305386047 2727.925961750511 2635.5606441918508 2838.355282766371 2965.8400669920265 2332.473823245079 2973.7804702876374 2879.1241120177256 0.8926168148623166 1.0833605928136265 0.9159365896393233 0.9746526448184352 0.9474846708983125 0.9154036233418286 0.9858398500150857 1.0301188665720733 0.810133128165306 1.032876789810765 1.0 11.491414265968125 -8.733635859255989 24.999855394481717 0.9103405599730452 0.9686306033081437 0.0 0.07520078002797377 385.7643125943477 346864.17655275174 0.013627344998840982 0.015450371321552378 1.846563048849185e-09 8.733635859255989 0.05829004333509846 SGNLTEDDKHNNAK ddPTM_A549_PD325901_60min_R1 1 SGNLTEDDKHNNAK 14 1 P13797-3;P13797;A0A0A0MSQ0;P13797-2 P13797-3 PLS3 Plastin-3 0 154.69 2.3739e-18 7425600.0 1600.7 1825.1 1572.2 2222.9 2217.4 1785.6 1743.0 1774.4 1754.1 1903.4 1886.3 False True 1763.2018856269406 1978.907582189008 1678.8989464066262 2360.2034844278105 2061.6574736147186 1771.0586656137932 1809.3308188061976 1739.0082000101286 1680.3812770470633 1783.2189991637233 1654.2970582408939 1.065831482225962 1.1962226326469387 1.014871505720921 1.4267108030389333 1.2462438129503741 1.0705807985278402 1.0937157929363424 1.05120672937623 1.015767554367718 1.0779315542396717 1.0 10.692002603796748 -7.834814302921445 1.4794125571264996 1.0099936447442341 1.1879288072940088 0.2802361365283502 0.10370668203502377 0.3011699912312307 1.3401517041115183 0.016902015334344822 0.025919643311579883 1.4628025107167067e-08 7.834814302921445 0.1779351625497747 SGNMIQSANDKNFDDEDS(ph)VDGNRPSSASSTSSK ddPTM_A549_PD325901_60min_R1 4 SGNMIQSANDKNFDDEDSVDGNRPSSASSTSSK 33 2 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 SGNMIQSANDKNFDDEDS(1)VDGNRPSSASSTSSK;SGNMIQSANDKNFDDEDS(0.999)VDGNRPSSASSTSSK;SGNMIQSANDKNFDDEDS(1)VDGNRPSSASSTSSK;SGNMIQSANDKNFDDEDS(1)VDGNRPSSASSTSSK 102.71 1.0169e-14 45248500.0 4210.04 5216.38 4753.1 4982.0 5347.469999999999 5800.09 4423.33 5261.09 5705.9 5728.200000000001 6083.7 True False 4637.440161532358 5655.982649487199 5075.673948712211 5289.726825057068 4971.882154970008 5752.855990053714 4591.66224368905 5156.153432704738 5466.100865801742 5366.520474419275 5335.443467751754 0.8691761405704631 1.0600773269687578 0.9513124784079093 0.9914315196157537 0.9318592137693583 1.0782338946752723 0.8605961756397135 0.9663964136944432 1.0244885732253939 1.005824634232441 1.0 12.381392473638076 -8.750925956483224 23.89503856725517 1.0115640478719878 0.966691992357175 0.0945829796892772 0.06347782481498562 204.07413929125858 463820.8579336807 0.00974101412847655 0.01098287441069885 1.7744919908993903e-09 8.750925956483224 -0.04487205551481288 SGNNETFT(ph)PNRVEK ddPTM_A549_MK2206_60min_R1 2 SGNNETFTPNRVEK 14 1 Q6P0N0;G5E9K5;Q6P0N0-2;C9J2Q8 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 S(0.008)GNNET(0.029)FT(0.963)PNRVEK;SGNNET(0.01)FT(0.99)PNRVEK 80.975 0.00018958 32587000.0 11623.0 14265.0 12904.2 13083.9 17134.9 13292.3 13902.8 13258.7 18713.1 19593.2 18357.6 True False 13584.678244932855 14991.027569258664 14734.209599001171 16289.456087358587 14614.378908464778 14698.88236328536 16428.75879924191 15138.161328065811 14474.612728680164 15167.082511931623 13798.901276014723 0.9844753559144429 1.0863928416761772 1.0677813620285987 1.1804893564731092 1.059097287250509 1.0652212135784307 1.1905845596416007 1.0970555571970786 1.0489684967773458 1.0991514620294498 1.0 13.75226577794781 -9.227734180735672 1.4786852058967848 1.0146205983842331 1.0938300913742431 0.01642682946114027 0.06004224534866945 0.33057539219249515 1.4953361034524981 0.011888549085647364 0.010603620315785933 5.919238230091566e-10 9.227734180735672 0.07920949299001001 SGNNETFT(ph)PNRVEK ddPTM_A549_PD325901_60min_R1 2 SGNNETFTPNRVEK 14 1 Q6P0N0;G5E9K5;Q6P0N0-2;C9J2Q8 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 SGNNET(0.005)FT(0.995)PNRVEK;S(0.003)GNNET(0.02)FT(0.977)PNRVEK 96.48700000000001 1.8242999999999998e-05 45461000.0 8736.0 9499.3 8506.1 9019.3 10642.6 9230.900000000001 9446.1 9979.1 9633.6 9986.099999999999 10557.5 True False 9622.872288896706 10299.839348796255 9083.375097334565 9576.401676683501 9895.100490976825 9155.72661089514 9805.576504604262 9780.059022047495 9228.733293746422 9355.575941761515 9258.99442950657 1.0392999328556165 1.1124144665183855 0.9810325696263147 1.0342809631859609 1.0687014196102238 0.9888467565892106 1.0590325525367899 1.0562765855955583 0.9967317038593616 1.0104311016698702 1.0 13.176639803164939 -8.771706280645832 24.738041012946695 0.9984566327595734 1.0421321487394335 0.2112389290777711 0.034274453388699624 174.03758222922352 419340.93099197175 0.005583793590970415 0.005977088059176037 1.6915845868756104e-09 8.771706280645832 0.04367551597986008 SGNQVSEFISNTFLDKQHEVEIPS(ph)PTQK ddPTM_A549_PD325901_60min_R1 1 SGNQVSEFISNTFLDKQHEVEIPSPTQK 28 1 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;Q08499-5;Q08499-4;Q08499-3;Q08499-8;D6RHE0;Q08499-6 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 SGNQVSEFISNTFLDKQHEVEIPS(0.992)PT(0.008)QK 231.24 8.390099999999999e-105 44738000.0 14427.0 14303.0 16012.0 16752.0 21498.0 21091.0 16637.0 20284.0 19141.0 19929.0 23103.0 True False 15891.618419403927 15508.364006382866 17098.670607977932 17786.73299344762 19988.054644073785 20919.241888698773 17270.130139115718 19879.41970750983 18336.570334620515 18670.679538895587 20261.477461983468 0.784326732797315 0.7654113099837437 0.8439004825812976 0.8778596243448089 0.9865052872663059 1.0324637938151087 0.8523628235660304 0.9811436379607316 0.9049967046591421 0.9214865783567516 1.0 14.306451758494006 -6.271317628446067 1.793476912545325 0.9555804580613771 0.7771399827625562 0.6657729983697805 0.04907721264033108 0.1683606980530566 1.0265664350245873 0.0075670382397666856 0.026083066352919015 5.354049370368983e-07 6.271317628446067 -0.1784404752988209 SGNQVSEFISNTFLDKQHEVEIPS(ph)PTQKEK ddPTM_A549_PD325901_60min_R1 1 SGNQVSEFISNTFLDKQHEVEIPSPTQKEK 30 2 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;Q08499-5;Q08499-4;Q08499-3;Q08499-8;D6RHE0;Q08499-6 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 SGNQVSEFISNTFLDKQHEVEIPS(0.85)PT(0.15)QKEK 114.2 4.5636999999999996e-21 5131500.0 1533.4 1736.1 1614.4 1808.7 2194.4 2471.3 2116.3 2603.8 2326.7 1677.0 2489.7 True False 1689.0696391705821 1882.40723984348 1723.96289217584 1920.419291144263 2040.272914269026 2451.1745521569023 2196.836954583797 2551.865166358415 2228.9168903172017 1571.11393380139 2183.482683508644 0.7735667664908666 0.8621122823921987 0.7895473159446355 0.8795211913741107 0.9344122257889886 1.1225985764256685 1.0061160416686674 1.1687132605319388 1.0208081369967859 0.7195449479254686 1.0 11.092415374280247 -6.819907506315554 2.319537719384177 1.0299299685245074 0.8174483841824607 0.3596256541390711 0.11016829361934484 0.11648900564570308 1.2773137960038792 0.008708655990133566 0.01888832023687789 1.5138836328345102e-07 6.819907506315554 -0.21248158434204667 SGNS(ph)DSIER ddPTM_A549_MK2206_60min_R1 2 SGNSDSIER 9 0 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 SGNS(0.919)DS(0.081)IER;SGNS(0.987)DS(0.012)IER 124.21 9.0275e-05 249760000.0 1807.96 2047.83 2048.1800000000003 1906.6799999999998 4078.3999999999996 2918.3 3419.5 3290.8 4756.7 4474.5 4437.0 True False 2113.099447621853 2152.055800010864 2338.6427222518414 2373.8166855941163 3478.472762623811 3227.11256898924 4040.7788872750607 3757.28097765233 3679.315044889033 3463.7073423247884 3335.170445029707 0.6335806467615274 0.6452611149807953 0.7012063583548008 0.7117527348959739 1.042967014716643 0.9676004936414864 1.2115659315993574 1.1265634064524888 1.1031865104142407 1.0385398285975567 1.0 11.70354477738097 -6.739521284358195 3.39393722620076 1.0636125410735418 0.6627955021657438 0.900484754698894 0.06362594823395853 0.059684028201454596 1.4334506085750316 0.010438204708241524 0.022091908442470505 1.8217077907433462e-07 6.739521284358195 -0.40081703890779796 SGNTPNS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SGNTPNSPR 9 0 Q96EA4-2;Q96EA4-3;Q96EA4 Q96EA4-2 SPDL1 Protein Spindly 1 SGNT(0.011)PNS(0.989)PR;SGNTPNS(1)PR 106.67 0.00051747 296530000.0 2205.41 2471.72 1733.05 1304.93 2140.45 1570.48 1320.06 1451.52 2145.84 3051.1000000000004 2726.4 True False 2577.6292909022945 2597.5199904302845 1978.8225496775453 1624.6379085805331 1825.5926404369688 1736.6671511997465 1559.8978148665924 1657.2774050935675 1659.8106662023433 2361.8543909190207 2049.359635187963 1.2577730363396564 1.2674788484316202 0.9655809140088055 0.7927539318551694 0.890811260791486 0.8474194189154425 0.7611635303451861 0.8086806125375674 0.8099167357954277 1.1524840981375124 1.0 11.000957464899221 -5.830032903902871 3.8120876768387286 0.8783922692747594 1.2690877960537 0.6516991561503975 0.1056150264512645 0.07981124907826356 2.264291138028712 0.012484471924374121 0.0456359960328561 1.4789963291917397e-06 5.830032903902871 0.3906955267789405 SGNTPNS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SGNTPNSPR 9 0 Q96EA4-2;Q96EA4-3;Q96EA4 Q96EA4-2 SPDL1 Protein Spindly 1 SGNTPNS(1)PR;S(0.001)GNT(0.037)PNS(0.962)PR 96.64 0.00088556 301690000.0 2168.9700000000003 2732.99 2333.22 2499.8 2514.8999999999996 2396.89 2297.6 2063.66 2571.2 2809.2 2817.7 True False 2389.1622376886794 2963.3086587292396 2491.5663399916466 2654.2069685422844 2338.2620999340024 2377.370522526348 2385.036425294963 2022.4986823900479 2463.1414055888536 2631.8266325789286 2471.140762871956 0.9668256351823513 1.1991662730233492 1.0082656469540618 1.0740816583259178 0.9462278050144248 0.9620538652615529 0.9651560368916731 0.8184473797597441 0.9967628888636009 1.0650249763676851 1.0 11.270961477487129 -6.7521521495899375 24.955575111754342 0.9762123947976368 1.0680321337110512 0.2586114099268899 0.07748019303756641 204.9636183487405 550750.1752142657 0.010201115468189737 0.02100959614686954 1.7694889316023377e-07 6.7521521495899375 0.09181973891341444 SGPCSSSSDS(ph)DSGDEGVSQEER ddPTM_A549_MK2206_60min_R1 1 SGPCSSSSDSDSGDEGVSQEER 22 0 Q15653-2 Q15653-2 NFKBIB NF-kappa-B inhibitor beta 1 S(0.003)GPCS(0.008)S(0.008)S(0.049)S(0.049)DS(0.441)DS(0.441)GDEGVSQEER 61.102 0.0014402999999999998 1098400.0 0.0 260.24 196.57 192.73 302.71 213.53 236.63 162.09 277.89 268.8 252.06 True False 0.0 273.4851044250875 224.4465818009377 239.94885865197847 258.18175999751213 236.12560287025747 279.62260801166764 185.06675387980619 214.94835869914297 208.0778933102923 189.46654549790122 0.0 1.4434479908122724 1.184623814252337 1.2664444692408057 1.3626772965065332 1.2462654145603405 1.475841591331305 0.9767780026466795 1.1344924146596846 1.0982302588748958 1.0 7.565799320993694 -5.252445482542157 24.846070470823832 1.1531520283997123 6.42134939433897e-07 0.8069755154342003 0.16861061690292217 394.08721129279394 1088659.7539014616 0.02543815976940937 0.4278493183917532 5.59183718104181e-06 5.252445482542157 -1.1531513862647729 SGPCSSSSDS(ph)DSGDEGVSQEER ddPTM_A549_PD325901_60min_R1 1 SGPCSSSSDSDSGDEGVSQEER 22 0 Q15653-2 Q15653-2 NFKBIB NF-kappa-B inhibitor beta 1 S(0.003)GPCS(0.003)S(0.003)S(0.003)S(0.02)DS(0.483)DS(0.483)GDEGVSQEER 53.278 0.0080652 1642300.0 0.0 0.0 219.41 202.72 318.27 0.0 238.83 302.7 169.51 0.0 0.0 True False 0.0 0.0 234.3004820195126 215.24155398947593 295.9158131718934 0.0 247.91880634279067 296.66241103644364 162.38608418690373 0.0 0.0 0.0 SGPCSSSSDSDS(ph)GDEGVSQEER ddPTM_A549_MK2206_60min_R1 1 SGPCSSSSDSDSGDEGVSQEER 22 0 Q15653-2 Q15653-2 NFKBIB NF-kappa-B inhibitor beta 1 S(0.002)GPCS(0.002)S(0.002)S(0.002)S(0.002)DS(0.097)DS(0.892)GDEGVS(0.002)QEER 48.848 0.012417000000000001 984280.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 198.2 258.58 0.0 145.58 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 226.29545696204326 200.0120428674094 0.0 109.42846819639954 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.067976100660513 1.8277880168114269 0.0 1.0 6.773844298864365 -8.24533788996875 24.38900210544669 1.4526028028391191 1.192150848350065e-07 0.5597723100575358 0.5076105114571811 190.12128144826914 287977.7642092422 0.056996197788089814 0.07345428262778317 5.6841052377931256e-09 8.24533788996875 -1.4526026836240342 SGPCSSSSDSDS(ph)GDEGVSQEER ddPTM_A549_PD325901_60min_R1 1 SGPCSSSSDSDSGDEGVSQEER 22 0 Q15653-2 Q15653-2 NFKBIB NF-kappa-B inhibitor beta 1 SGPCSSS(0.001)S(0.001)DS(0.019)DS(0.979)GDEGVSQEER 78.661 0.00013512 1610200.0 293.67 235.16 213.91 212.05 381.84 252.94 421.08 0.0 199.15 222.62 233.93 True False 323.4831622115723 254.97775849409177 228.42721894532585 225.14784689950847 355.020875676488 250.88014050198976 437.1044298238173 0.0 190.7804180627802 208.5637352074331 205.1580930044492 1.576750677851919 1.24283548730667 1.113420463215029 1.097435853503599 1.7304746328909812 1.2228625097258483 2.130573663571429 0.0 0.9299190456924495 1.0166000870504779 1.0 7.680592256055339 -8.249166735128973 24.991716571333857 0.8934635496834874 1.4134649013349843 0.40478015847409776 0.39575777718797633 726.7577636108183 1479953.135948356 0.0607595441090251 0.0781460939491612 5.634213045635696e-09 8.249166735128973 0.5200013516514969 SGPEAEGLGSETSPTVDDEEEMLYGDS(ph)GSLFSPSKEEARR ddPTM_A549_MK2206_60min_R1 1 SGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARR 40 2 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 1 SGPEAEGLGS(0.019)ET(0.018)S(0.018)PT(0.019)VDDEEEMLY(0.018)GDS(0.276)GS(0.276)LFS(0.276)PS(0.082)KEEARR 41.526 0.008600299999999998 2948400.0 353.14 765.42 476.27 531.74 943.29 929.25 865.04 586.3 553.14 595.22 499.54 True False 412.7413985559313 804.376608626847 543.8122476183172 662.0163238707155 804.5332905687068 1027.5826182137725 1022.2065707408738 669.4098204684459 427.8546731830725 460.75938860175654 375.4904313973721 1.0992061689027102 2.142202680460838 1.4482719189262492 1.7630710892073844 2.142619953255984 2.7366412890727103 2.7223238870209667 1.7827613289032824 1.1394555956880954 1.2270868977594436 1.0 8.552632333861945 -8.712065715225917 3.79872103554626 1.060919243498963 2.0284347898639075 0.41239671370142994 0.4594187655068677 0.1479338903682779 4.375461206077787 0.08266722454324667 0.09194093566933956 1.9405922148594507e-09 8.712065715225917 0.9675155463649445 SGPEAEGLGSETSPTVDDEEEMLYGDS(ph)GSLFSPSKEEARR ddPTM_A549_PD325901_60min_R1 4 SGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARR 40 2 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 1 SGPEAEGLGSET(0.001)S(0.001)PT(0.002)VDDEEEMLY(0.006)GDS(0.253)GS(0.253)LFS(0.253)PS(0.232)KEEARR;SGPEAEGLGS(0.001)ETS(0.002)PT(0.003)VDDEEEMLY(0.002)GDS(0.312)GS(0.312)LFS(0.312)PS(0.056)KEEARR;SGPEAEGLGSETS(0.002)PT(0.01)VDDEEEMLY(0.01)GDS(0.244)GS(0.244)LFS(0.244)PS(0.244)KEEARR;SGPEAEGLGSETSPTVDDEEEMLYGDS(0.321)GS(0.321)LFS(0.321)PS(0.038)KEEARR 99.01100000000001 1.3993e-10 44291100.0 2260.74 2827.15 2692.82 2556.68 2640.37 2902.2200000000003 2437.33 2491.88 2271.2200000000003 3139.48 3291.5499999999997 True False 2490.2486605311747 3065.403852383788 2875.570958442113 2714.6003169584305 2454.919519982004 2878.5852825479747 2530.083926908151 2442.1774985579573 2175.768521780306 2941.2526970129925 2886.7102168545935 0.8626597314795907 1.0619021730985876 0.9961411927156935 0.9403785323198472 0.8504211838266622 0.997185400093442 0.8764592691485922 0.8460071552381152 0.7537190636859487 1.0188943385588005 1.0 11.495210574193004 -6.546452614395023 4.708705633050112 0.884625166367927 0.9809732714248546 0.06910652547812124 0.08775451478812309 0.2828055288192358 15.743168374427729 0.014462664227453535 0.031771465400155 2.84149820219887e-07 6.546452614395023 0.09634810505692759 SGPGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SGPGSPR 7 0 Q8IVE3;Q8IVE3-3;Q8IVE3-2 Q8IVE3 PLEKHH2 Pleckstrin homology domain-containing family H member 2 1 S(0.001)GPGS(0.999)PR 60.828 0.028489999999999998 16208000.0 837.41 534.74 560.94 484.21 589.06 598.54 483.84 543.83 823.24 880.43 890.92 True False 922.4232467313403 579.8044164701935 599.0087616062417 514.1185519793019 547.686457746679 593.6656886853046 502.2527959674073 532.982884023618 788.6420856942165 824.8394995448759 781.3424880071983 1.1805619953984152 0.742061804355444 0.766640456394486 0.65799385016237 0.7009556835230408 0.7598021326082491 0.642807480300214 0.6821373369608793 1.0093423790451173 1.055669584344013 1.0 9.609811257274316 -8.771270744306822 24.998332011959995 1.0044117055553317 0.7556381209206543 0.3953640555710558 0.1395485804080105 140.9818421953781 358475.17209931253 0.023116325481483804 0.024755883525236864 1.6932818594382833e-09 8.771270744306822 -0.24877358463467736 SGPKPFSAPKPQTS(ph)PS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 SGPKPFSAPKPQTSPSPKR 19 3 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 2 SGPKPFS(0.001)APKPQT(0.447)S(0.58)PS(0.972)PKR;S(0.001)GPKPFS(0.003)APKPQT(0.543)S(0.64)PS(0.814)PKR 51.233999999999995 0.004968800000000001 35154000.0 3952.8999999999996 3697.5 4708.9 3986.0 5205.8 5618.5 4447.1 5835.0 6054.3 5484.200000000001 5522.5 True False 4354.19549802882 4009.1013013773772 5028.474270916014 4232.206167137187 4840.162567035045 5572.74479880774 4616.336824046498 5718.616347531053 5799.858825395379 5137.926676060574 4843.267510011844 0.8990202356215033 0.8277678846130003 1.038240043631973 0.8738328325636584 0.9993589156555196 1.1506167659101927 0.9531451266120976 1.1807351825414798 1.1975094940360203 1.0608389203032087 1.0 12.241764974718912 -7.008785099484182 4.39405800073082 1.0944208565550644 0.9139758039410711 0.507102787996696 0.08320937415997245 0.14851500760009215 7.1037392795189085 0.014105245758425705 0.026162169725592238 9.799747831651149e-08 7.008785099484182 -0.18044505261399324 SGPKPFSAPKPQTS(ph)PSPK ddPTM_A549_MK2206_60min_R1 3 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.106)S(0.881)PS(0.013)PK;SGPKPFSAPKPQT(0.04)S(0.936)PS(0.024)PK;SGPKPFSAPKPQT(0.046)S(0.926)PS(0.028)PK 166.49 2.5254e-24 2870159000.0 19757.0 22814.199999999997 23178.199999999997 21103.8 33668.1 27453.9 24223.6 24241.399999999998 38346.6 39893.4 38481.2 True False 23091.498587725924 23975.345332673045 26465.21728798135 26274.23194738557 28715.567089862365 30359.053475576104 28624.714564642803 27677.692686173952 29661.156326937118 30881.453232830405 28925.25601290898 0.7983161351249745 0.8288723640673448 0.9149518772165839 0.9083491581080462 0.9927506631936799 1.0495690500380441 0.9896097221012651 0.956869411071824 1.0254414451405276 1.067629383091662 1.0 14.82004210800649 -6.027394247947642 0.8914529599889351 1.0093971534298658 0.7751472603955174 0.8468458012004167 0.032403284197553096 0.22219949224955837 0.24431170708391398 0.004397865342464228 0.038987558088994054 9.388706267472766e-07 6.027394247947642 -0.2342498930343484 SGPKPFSAPKPQTS(ph)PSPK ddPTM_A549_PD325901_60min_R1 2 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.019)S(0.972)PS(0.009)PK;SGPKPFS(0.003)APKPQT(0.221)S(0.441)PS(0.335)PK 155.97 3.0368e-23 2891256000.0 36821.7 36760.6 37411.9 43819.0 44315.0 52662.0 41734.6 46278.0 49178.0 43586.0 43311.0 True False 40559.81187729714 39858.544773336915 39950.89651003058 46525.60010983052 41202.46727845054 52233.13813203043 43322.83304104942 45354.94898561132 47111.21968110171 40833.97252156672 37984.02157104989 1.0678124695519453 1.0493503090182459 1.0517816402168372 1.2248729382907346 1.0847315680194758 1.3751344900204228 1.1405541395876995 1.1940533705935787 1.240290462477208 1.075030258320224 1.0 15.213105038945768 -6.217667161868623 23.54468439178371 1.146031107485175 1.055618238976508 0.18783643463058153 0.09546627458335737 430.94418033139266 231799.2829111868 0.015995051687244376 0.04231839230325083 6.058049786278185e-07 6.217667161868623 -0.09041286850866692 SGPKPFSAPKPQTSPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.007)S(0.007)PS(0.986)PK 61.222 0.0010269 91920000.0 711.65 654.02 1056.2 1289.3 1279.7 998.46 952.72 960.88 1347.7 1535.8 1410.2 True False 831.7591218279674 687.3068244547184 1205.9850419603727 1605.1785578788765 1091.4578252083388 1104.116374475893 1125.816891792571 1097.0876825715843 1042.4481018346655 1188.8617133405767 1060.0084204599714 0.7846721835162788 0.648397513820196 1.137712699902004 1.5143073648248364 1.029669014077002 1.0416109468232166 1.062082970344748 1.034980158077917 0.9834337932733724 1.1215587446227 1.0 10.049860009929422 -5.7591101717717965 24.9999383099032 1.047425807896047 0.7165347682385991 0.4661809734821606 0.15014366971185003 44.09828514961603 473284.31331402966 0.021804500434647087 0.07712668984546167 1.7413650680749502e-06 5.7591101717717965 -0.3308910396574479 SGPKPFSAPKPQTSPS(ph)PK ddPTM_A549_PD325901_60min_R1 3 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.159)S(0.212)PS(0.629)PK;SGPKPFSAPKPQT(0.003)S(0.131)PS(0.866)PK;SGPKPFSAPKPQT(0.007)S(0.034)PS(0.96)PK 147.11 1.4273e-17 3093090000.0 29677.7 28872.8 33904.6 31617.9 35269.100000000006 36144.0 35223.299999999996 37996.3 33298.1 34699.2 34399.7 True False 32690.558256431985 31306.012185100426 36205.570040922306 33570.865873539115 32791.92008778969 35849.655247505005 36563.741956429316 37238.43398897928 31898.696654261916 32508.28659019749 30168.754977664918 1.0835899022228148 1.0376965243768748 1.2001015642749153 1.1127693502232 1.086949730344086 1.1883041005187611 1.2119738445785666 1.234337778159832 1.0573421633699416 1.0775481657849195 1.0 14.880767539255437 -8.950777490200236 7.159211247381662 1.0249711646237092 1.1438955368277373 0.3458573844512104 0.06067540835993023 0.14713126064710771 16.640783123078844 0.011079070176929159 0.01165639597835062 1.1200115718971885e-09 8.950777490200236 0.11892437220402807 SGPKPFSAPKPQTSPS(ph)PKR ddPTM_A549_MK2206_60min_R1 2 SGPKPFSAPKPQTSPSPKR 19 3 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.031)S(0.153)PS(0.816)PKR;SGPKPFS(0.002)APKPQT(0.139)S(0.139)PS(0.721)PKR 58.903999999999996 0.0012851 33232000.0 1691.91 2194.67 2463.9 2035.77 2897.7 2307.74 2264.3 2161.7 3391.1 3373.6 3339.7 True False 1977.463044771946 2306.3693288065147 2813.318069386633 2534.5337413891893 2471.452168559979 2551.9435150461663 2675.694000426061 2468.127594928601 2623.021264473942 2611.501416933043 2510.360318969057 0.7877208024002073 0.9187403542745941 1.1206829745229534 1.0096294632437703 0.9845009697950226 1.0165646324804027 1.0658605381098847 0.9831766285814301 1.044878396401339 1.0402894744629816 1.0 11.293678737715291 -5.478712072324943 4.005638794462944 1.023631181312587 0.8021553558246349 0.7758704572216429 0.03909794241970993 0.07192748337249233 2.327360480278169 0.005108129980553598 0.03187316499046526 3.3211456922367715e-06 5.478712072324943 -0.22147582548795197 SGPKPFSAPKPQTSPS(ph)PKR ddPTM_A549_PD325901_60min_R1 4 SGPKPFSAPKPQTSPSPKR 19 3 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFS(0.001)APKPQT(0.148)S(0.148)PS(0.703)PKR;SGPKPFSAPKPQT(0.006)S(0.03)PS(0.964)PKR;SGPKPFSAPKPQT(0.027)S(0.022)PS(0.951)PKR;SGPKPFSAPKPQT(0.024)S(0.07)PS(0.906)PKR 86.006 1.1119000000000001e-05 237419000.0 10255.7 11158.2 12803.500000000002 11225.3 12641.1 15930.2 14034.1 14108.2 14651.599999999999 11644.5 14964.2 True False 11296.85111415269 12098.540673706311 13672.422503700061 11918.661286493998 11753.232745427535 15800.469732840978 14568.1753552542 13826.800883331205 14035.844204311481 10909.264282737204 13123.69826587945 0.8607978395482916 0.9218850074571994 1.0418117078512275 0.9081785518859078 0.8955732223732228 1.2039647218894782 1.1100663136343414 1.053575036792774 1.0695037267660699 0.8312644851871066 1.0 13.67988670910943 -7.195704760594401 24.999993156364926 1.0524493000819748 0.9309229429301795 0.2817809010113961 0.09405267788323042 153.67966184501225 58446.77737541555 0.010536998758908284 0.018250616370244662 6.372285705051997e-08 7.195704760594401 -0.12152635715179527 SGPKPFSAPKPQTSPSPK ddPTM_A549_MK2206_60min_R1 2 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 0 ; 162.76 2.0109999999999999e-23 187740000.0 9787.4 11645.2 12200.7 10446.8 16998.3 13302.4 11790.0 11766.8 17408.2 17670.7 17012.0 False True 11439.273841044122 12237.890939329198 13930.942720550951 13006.266468974676 14497.87258751185 14710.051138581528 13932.090387768087 13434.779934313676 13465.270495183071 13678.876597165856 12787.450892685461 0.8945703046717067 0.9570234945206619 1.0894229692424138 1.0171117432337027 1.1337578309532172 1.150350547738628 1.0895127187340652 1.0506222113430357 1.053006624086848 1.069710977736016 1.0 13.64244107918651 -5.578047021828836 4.279664581651154 1.049674607728563 0.9059717944315286 0.5662313907124352 0.047326888725917185 0.13185910506099408 4.860836280143273 0.007703547011360843 0.03553665705773492 2.642122674557162e-06 5.578047021828836 -0.14370281329703438 SGPKPFSAPKPQTSPSPK ddPTM_A549_PD325901_60min_R1 2 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 0 ; 182.76 4.160599999999999e-40 160703000.0 12687.6 11503.400000000001 14188.2 13750.3 16327.8 14968.099999999999 14979.099999999999 16468.7 15617.8 14667.900000000001 15160.5 False True 13975.635811882541 12472.831889185818 15151.096572577593 14599.624801802922 15180.991655852082 14846.204756257734 15549.137847378024 16140.218859054778 14961.438178362476 13741.766290760528 13295.854610327671 1.0511273040716649 0.9380992989722855 1.1395353677234743 1.0980583971234565 1.1417838191506782 1.1166040236876398 1.1694726140657477 1.2139286516052696 1.1252708920824877 1.0335376471465392 1.0 13.698688891040344 -5.765255609321186 24.999458282806984 1.0938812030088243 0.9946133005961847 0.30517426299475603 0.06386506718956995 107.96876736721958 707307.7012980768 0.010793176887082718 0.03552004688896752 1.7168975886842812e-06 5.765255609321186 -0.09926790241263961 SGPPS(ph)PPSTATSFGGPR ddPTM_A549_MK2206_60min_R1 2 SGPPSPPSTATSFGGPR 17 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3 A0A0A0MS59 SRCAP Helicase SRCAP 1 S(0.009)GPPS(0.452)PPS(0.093)T(0.119)AT(0.153)S(0.174)FGGPR;S(0.002)GPPS(0.757)PPS(0.037)T(0.046)AT(0.074)S(0.084)FGGPR 56.407 0.0094668 6374300.0 9210.9 9402.6 8731.5 8460.5 14125.8 10059.7 10420.1 10579.8 14312.099999999999 13475.1 14088.7 True False 10765.474735115884 9881.15217824827 9969.757994581512 10533.322879806281 12047.913532334103 11124.210776911581 12313.297290040902 12079.519049278639 11070.432201727315 10431.065551136602 10590.086961661043 1.0165615045551364 0.9330567552486295 0.9414236191520156 0.9946398852001628 1.1376595467016262 1.0504362067265556 1.1627191858403376 1.1406439902721988 1.0453580071443465 0.9849839372329857 1.0 13.370426815776963 -6.532448042173474 24.926099541959346 1.0514244428757071 0.9618538121357795 0.3805913382142321 0.05963474264259191 194.48401646112237 506590.9402468276 0.009448923894853007 0.019688950250895704 2.934620573086323e-07 6.532448042173474 -0.08957063073992766 SGPPS(ph)PPSTATSFGGPR ddPTM_A549_PD325901_60min_R1 1 SGPPSPPSTATSFGGPR 17 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3 A0A0A0MS59 SRCAP Helicase SRCAP 1 S(0.006)GPPS(0.829)PPS(0.042)T(0.114)AT(0.008)S(0.002)FGGPR 75.018 0.00049524 8389200.0 3103.4 2877.8 2306.2 3081.2 3192.0 3258.1 2799.7 3354.5 3488.4 3606.9 5196.3 True False 3418.4548833976687 3120.322305639977 2462.7126003071858 3271.5187260870816 2967.8049318021913 3231.5671138196108 2906.244115554625 3287.5918659456597 3341.7946792377725 3379.1597184425964 4557.188042059676 0.7501237280199341 0.6847034348465704 0.5404017954883716 0.7178810037885729 0.6512360043981982 0.7091142792429221 0.6377274952738428 0.7214079901034307 0.7333019064377707 0.7415010500456207 1.0 12.153928186000037 -10.371806125774006 0.4647383774072345 1.0500335430478567 0.6605005349913092 0.25442729354387883 0.09203602755008865 0.38271723749962683 0.13057596037929356 0.06698503072465917 0.014103650286473047 4.2480916148992506e-11 10.371806125774006 -0.38953300805654745 SGPPS(ph)PPSTATSFGGPRPR ddPTM_A549_MK2206_60min_R1 2 SGPPSPPSTATSFGGPRPR 19 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3 A0A0A0MS59 SRCAP Helicase SRCAP 1 SGPPS(0.999)PPSTATSFGGPRPR;SGPPS(1)PPSTATSFGGPRPR 189.54 2.7386e-44 102209000.0 19209.5 20363.1 21369.3 19456.8 28838.0 22693.9 19867.0 22149.0 31526.0 30213.0 31882.0 True False 22451.593972815754 21399.494812167628 24399.788067755897 24223.716873448946 24595.968401467613 25095.353435008365 23476.576737386644 25288.688578467692 24385.41133667704 23387.862316160208 23964.819501563474 0.9368563769633651 0.8929545582753718 1.0181502959437707 1.010803226449028 1.026336476261086 1.0471747318343514 0.9796266871884858 1.0552421885263041 1.0175503861018493 0.975924826583166 1.0 14.548630453444154 -5.76778464009087 24.997591609021907 1.0141181896429592 0.9149054586934637 0.7053725554214209 0.0248333372252275 44.02250904945201 173432.94326147754 0.0028958883374764783 0.009329469168475137 1.7069286186422654e-06 5.76778464009087 -0.09921273094949545 SGPPS(ph)PPSTATSFGGPRPR ddPTM_A549_PD325901_60min_R1 2 SGPPSPPSTATSFGGPRPR 19 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3 A0A0A0MS59 SRCAP Helicase SRCAP 1 SGPPS(1)PPSTATSFGGPRPR;SGPPS(1)PPSTATSFGGPRPR 218.42 2.9398999999999995e-67 139295000.0 29599.0 26292.0 28172.0 27351.0 31993.0 29255.0 26692.0 30716.0 29845.0 30272.0 36512.0 True False 32603.86869036784 28507.71911178201 30083.921331998135 29040.409151372125 29745.922049858244 29016.756979464342 27707.778666422844 30103.34528376415 28590.71843878319 28360.620753748142 32021.25546863782 1.0181945777329262 0.8902748719425748 0.9394984953498421 0.9069103858159094 0.9289430290761685 0.9061717460729752 0.8652933266017733 0.9401050909214941 0.8928668792135724 0.885681099591021 1.0 14.966742252764956 -10.866715235055004 1.0605204295734454 1.0010192285339097 0.9170815533916336 0.0 0.0503115758837766 0.40786546013001246 0.7979375958685023 0.025945688816441104 0.0059795484832847745 1.359204378683415e-11 10.866715235055004 -0.08393767514227612 SGPS(ph)PLS(ph)SPNGK ddPTM_A549_MK2206_60min_R1 1 SGPSPLSSPNGK 12 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 2 SGPS(1)PLS(0.643)S(0.357)PNGK 130.4 8.383800000000001e-08 16774000.0 5159.5 5704.1 5770.1 5850.7 7254.8 6320.9 5673.9 5598.1 7856.9 8086.2 8635.1 True False 6030.29746233598 5994.414325819022 6588.386944343446 7284.121762647905 6187.628530375446 6989.773442526158 6704.774185848792 6391.647818462234 6077.324694891132 6259.521803890202 6490.766353363988 0.9290578545029032 0.9235295186233718 1.015039917579049 1.1222283111258107 0.9532970674824193 1.0768795334781305 1.032971119407786 0.9847293016716918 0.9363031056789496 0.9643733055721628 1.0 12.664173109408267 -11.660838746660366 3.6461236383894935 1.0005407139563656 0.9848978647464145 0.0 0.06181425515246154 1.853479354273554 45.51220787999358 0.06288743998630138 0.009089507821195435 2.183540508924412e-12 11.660838746660366 -0.01564284920995107 SGPS(ph)PLS(ph)SPNGK ddPTM_A549_PD325901_60min_R1 2 SGPSPLSSPNGK 12 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 2 S(0.015)GPS(0.985)PLS(0.896)S(0.104)PNGK;S(0.001)GPS(0.999)PLS(0.599)S(0.402)PNGK 90.156 0.00031464 63062000.0 21752.5 22285.6 21367.0 23495.7 25490.0 25242.0 22810.2 26118.0 24573.7 26676.0 26632.0 True False 23960.797786655865 24163.68572331999 22817.093110208854 24946.976026393673 23699.67033572617 25036.437520958432 23678.25464322039 25597.056000825363 23540.952846343665 24991.672807445357 23356.432834157615 1.0258757386793413 1.034562336419019 0.976908300690506 1.0680987205336412 1.0146956302790633 1.0719289926989148 1.0137787226049402 1.0959317367757866 1.0079001795135514 1.070012402360359 1.0 14.511532331616538 -8.967149818950526 24.99980538475264 1.0034853193878652 1.0371607867944956 0.0 0.036771875602773 196.96854736871515 149899.1741624739 0.004946786305980687 0.005232920522548115 1.0785745812198874e-09 8.967149818950526 0.03367546740663041 SGPS(ph)PLSS(ph)PNGK ddPTM_A549_MK2206_60min_R1 1 SGPSPLSSPNGK 12 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 2 SGPS(1)PLS(0.166)S(0.834)PNGK 130.77 8.077500000000001e-08 15944000.0 7625.4 8222.0 8992.9 8308.0 11275.0 8706.1 7500.1 8615.6 12448.0 11916.0 11865.0 True False 8912.38109686922 8640.464680998586 10268.228445223858 10343.460372960288 9616.462435902184 9627.373723358543 8862.771087133115 9836.887684168416 9628.547875371312 9224.16732397858 8918.59304265889 0.9993034836593668 0.968814771530669 1.151328286435929 1.159763689573687 1.078248821300096 1.0794722527768064 0.9937409459924037 1.102964070354729 1.0796039049339519 1.0342626106896105 1.0 13.122600419642056 -10.74184465334784 0.8613562602207897 0.9973044577524671 1.0702658583070077 0.08945692838038366 0.05887389530000576 1.0336644326287707 1.2817085551532141 0.04996428707008072 0.011115105765430348 1.8119881228449466e-11 10.74184465334784 0.07296140055454059 SGPS(ph)PLSSPNGK ddPTM_A549_MK2206_60min_R1 2 SGPSPLSSPNGK 12 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 SGPS(1)PLSSPNGK;SGPS(1)PLSSPNGK 204.85 4.9703000000000005e-25 26023000.0 7213.8 8914.099999999999 7477.6 7610.6 8336.8 7061.5 7246.0 7260.5 11222.5 12500.0 11593.9 True False 8431.31307952307 9367.789614800466 8538.036119828523 9475.197341652813 7110.4677636921815 7808.743242955667 8562.504406256789 8289.698109348714 8680.621668649945 9676.24131837297 8714.814654638254 0.9674690069324312 1.0749270048806696 0.9797151698784959 1.087251733645289 0.8159057932354078 0.8960309028258734 0.9825228356061019 0.9512190950540432 0.9960764528744038 1.1103209536674448 1.0 13.089254266319106 SGPS(ph)PLSSPNGK ddPTM_A549_PD325901_60min_R1 2 SGPSPLSSPNGK 12 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 S(0.001)GPS(0.999)PLSSPNGK;SGPS(1)PLSSPNGK 185.57 2.8546999999999995e-19 48182000.0 14093.3 17491.8 14063.5 17252.9 18109.2 17630.1 15845.8 18588.4 17527.9 17588.7 19408.2 True False 15524.041441060885 18965.89537347743 15017.93368069557 18318.57244882118 16837.27226534845 17486.526310841014 16448.82059015446 18217.639779682308 16791.263317914156 16478.146480293683 17021.114438716508 0.9120461234753021 1.1142569684119679 0.8823120092850989 1.0762263842814812 0.9891991694180794 1.027343207978549 0.9663774160838553 1.070296533477512 0.9864961180050862 0.9681003285432486 1.0 14.055037878534208 -4.906030370104855 10.674509074276163 1.0026257758500319 6.133311015685452e-05 0.166422593785289 0.0606761906644381 52450.162761029555 187040.06763239639 0.00682664388253544 1138825.7420874324 1.241565482191946e-05 4.906030370104855 -1.002564442739875 SGPT(ph)DDGEEEMEEDTVTNGS ddPTM_A549_MK2206_60min_R1 1 SGPTDDGEEEMEEDTVTNGS 20 0 P09661 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 S(0.453)GPT(0.547)DDGEEEMEEDTVTNGS 76.391 0.00015599 4812000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGQASPSRPES(ph)PRPPFDL ddPTM_A549_PD325901_60min_R1 1 SGQASPSRPESPRPPFDL 18 2 A0A0D9SFB1;Q05193-2;Q05193 A0A0D9SFB1 DNM1 Dynamin-1 1 S(0.049)GQAS(0.035)PS(0.173)RPES(0.743)PRPPFDL 52.909 0.0045636 3254700.0 488.06 730.51 774.36 878.37 717.03 980.96 641.04 860.85 612.4 875.02 859.96 True False 537.6074919092176 792.0726414250684 826.9127262049578 932.6249199769924 666.6682864192124 972.9713869962517 665.4351279905478 843.6796714262392 586.6629576783657 819.7710878681524 754.1903717355877 0.7128273073442231 1.050229055035937 1.0964244005157704 1.2365908594547295 0.8839522637832616 1.2900872557643397 0.8823171879789568 1.118656115278578 0.7778711843381162 1.0869551224601905 1.0 9.558784922410247 -8.751629817375333 24.999270017762534 0.8951058328073597 1.0417618080912394 0.007128454770294779 0.1728566466836637 291.39489682636787 742607.3777800468 0.02748706777040264 0.03098102364300292 1.7716184016850346e-09 8.751629817375333 0.14665597528387975 SGQGFHGNSEVNAILS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SGQGFHGNSEVNAILSPR 18 0 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01 Q8TB72-4 PUM2 Pumilio homolog 2 1 SGQGFHGNS(0.002)EVNAILS(0.998)PR 45.70399999999999 0.010232999999999999 2955700.0 1305.2 1046.1 1080.5 959.95 1558.8 1342.2 1113.1 1357.6 1695.8 1630.0 2014.8 True False 1525.4858509237158 1099.3420217456357 1233.731147356735 1195.1377930937936 1329.5025849298736 1484.230713119747 1315.3358618002246 1550.0439574756301 1311.7040076361395 1261.7818679158356 1514.4695543488515 1.007274029737495 0.7258924542846288 0.814629217083984 0.7891461334841062 0.8778668287600507 0.9800333779294059 0.8685125812025685 1.0234896786301353 0.8661144780821353 0.8331510292119017 1.0 10.56459686033157 -7.014541427856554 5.274525373283692 0.9393636968832505 0.8254877311636455 0.20665437033135337 0.08448727491535582 0.1692984955800775 14.479739861257533 0.011560024701265072 0.021109082682218363 9.670714721756503e-08 7.014541427856554 -0.11387596571960501 SGQGSDRGS(ph)GSRPGIEGDTPR ddPTM_A549_MK2206_60min_R1 1 SGQGSDRGSGSRPGIEGDTPR 21 2 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 S(0.038)GQGS(0.038)DRGS(0.75)GS(0.173)RPGIEGDTPR 41.086999999999996 0.017286000000000003 2794100.0 354.76 363.75 286.98 326.85 317.79 271.79 257.55 262.51 375.59 502.34 759.0 True False 414.6348149507339 382.2633212981312 327.6780792859191 406.92826467285386 271.04351197386734 300.5506374003993 304.34350121880124 299.72159640315823 290.51946469398354 388.86104510971813 570.5193526656632 0.7267673094933889 0.67002691409514 0.5743505067004198 0.71325935355487 0.4750820646266574 0.5268018271354391 0.5334499168114165 0.5253486932612462 0.509219298760991 0.6815913312893335 1.0 9.156132014976212 -10.747124153916458 0.9409943911327671 1.006349139167808 0.579159699534411 0.29238154774409975 0.12165453399511472 0.21951245648260007 0.3370689475458611 0.06455301577250915 0.01558509849855956 1.7900940378244847e-11 10.747124153916458 -0.42718943963339706 SGQGSDRGS(ph)GSRPGIEGDTPR ddPTM_A549_PD325901_60min_R1 2 SGQGSDRGSGSRPGIEGDTPR 21 2 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 S(0.01)GQGS(0.01)DRGS(0.922)GS(0.057)RPGIEGDT(0.001)PR;S(0.066)GQGS(0.066)DRGS(0.433)GS(0.433)RPGIEGDT(0.001)PR 62.605 0.00035789999999999997 8367300.0 754.42 646.05 782.0999999999999 853.56 857.53 785.64 848.5799999999999 1024.47 767.61 843.05 840.8299999999999 True False 831.0081630253491 700.4949008126723 835.1780091493592 906.2824626245907 797.3000511178996 779.2420083181119 880.873176260793 1004.0361421688322 735.3500211356805 789.8196791241866 737.4132404605266 1.1269233008433248 0.9499353447670695 1.132577994704539 1.2290021563195725 1.0812120089137167 1.0567236463390086 1.194544833112399 1.3615651131267934 0.9972020853279533 1.071067938285094 1.0 9.526329510431095 SGRDT(ph)PASVDSIPLEWDHDYDLSR ddPTM_A549_MK2206_60min_R1 2 SGRDTPASVDSIPLEWDHDYDLSR 24 1 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20;A0A5F9ZH87;A0A5F9ZHE1;H0Y326;H0Y325;A0A5F9ZH86;A0A5F9ZHB2 Q8NF91 SYNE1 Nesprin-1 1 S(0.203)GRDT(0.791)PAS(0.004)VDS(0.002)IPLEWDHDYDLSR;S(0.174)GRDT(0.815)PAS(0.009)VDS(0.002)IPLEWDHDYDLSR 105.54 4.7082e-11 15545300.0 802.61 827.84 645.67 849.0600000000001 1333.56 1044.77 935.08 1026.52 1449.31 1429.6399999999999 1671.99 True False 938.0709460694793 869.9735200094709 737.2357148670271 1057.0797381157515 1137.3950905562501 1155.3268679378018 1104.9719321284285 1172.0323535856537 1121.0435990724932 1106.6833310718978 1256.7887384235337 0.7464030488100638 0.6922193789711479 0.58660273785695 0.8410958069545648 0.9050010202852022 0.919268953179035 0.87920260450015 0.9325611518892228 0.891990487182982 0.8805643281464137 1.0 10.295526443056968 -6.502673225260857 3.295728491222961 0.9360991435543665 0.6773785772877782 0.8062525454165376 0.0505821376258395 0.0777172458198087 1.7347717980092463 0.008156080795597029 0.019390901904748882 3.1428725855064304e-07 6.502673225260857 -0.25872056626658835 SGRDT(ph)PASVDSIPLEWDHDYDLSR ddPTM_A549_PD325901_60min_R1 3 SGRDTPASVDSIPLEWDHDYDLSR 24 1 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20;A0A5F9ZH87;A0A5F9ZHE1;H0Y326;H0Y325;A0A5F9ZH86;A0A5F9ZHB2 Q8NF91 SYNE1 Nesprin-1 1 S(0.19)GRDT(0.783)PAS(0.017)VDS(0.011)IPLEWDHDYDLSR;S(0.209)GRDT(0.774)PAS(0.016)VDS(0.001)IPLEWDHDYDLSR;S(0.414)GRDT(0.432)PAS(0.142)VDS(0.011)IPLEWDHDYDLSR 89.024 1.7599e-07 40151300.0 1406.59 1697.23 1423.83 1400.34 1841.24 1620.5 1346.6399999999999 1464.35 2000.4399999999998 1975.14 1452.6599999999999 True False 1549.3859813231707 1840.2615285292022 1520.4596659853357 1486.8358213971126 1711.9176543331669 1607.3031852750635 1397.8871221096824 1435.1423904896476 1916.3684635174898 1850.4293233204996 1273.9920291704486 1.216166150059858 1.444484334589971 1.1934608939236244 1.1670683861069804 1.3437428297317295 1.261627348109586 1.0972495040019263 1.1264924407919028 1.5042232758436647 1.4524653851448304 1.0 10.31514053595156 -11.14390156574213 1.5284615927355232 1.0004724788675328 1.2910063983156945 0.0 0.18095127247216247 0.35024794172112805 1.470281684256719 0.10166567299372399 0.021900793396056148 7.17957000122312e-12 11.14390156574213 0.29053391944816176 SGRS(ph)PQEASSTK ddPTM_A549_MK2206_60min_R1 2 SGRSPQEASSTK 12 1 A0A1B0GVD3;Q6ZN17-2;Q6ZN17 A0A1B0GVD3 LIN28B Protein lin-28 homolog B 1 S(0.24)GRS(0.76)PQEASSTK;S(0.248)GRS(0.752)PQEASSTK 98.94200000000001 7.2007e-05 52029300.0 4716.4 5350.5 4874.0 4583.6 5844.099999999999 4284.2 3652.0 4356.5 6104.799999999999 7536.6 7456.6 True False 5512.413015090878 5622.817596166739 5565.206489788732 5706.582205765621 4984.440631632459 4737.551200378202 4315.521127746311 4974.047216221704 4722.072547362365 5834.076825603973 5604.920428309336 0.9834953208699946 1.0031931172059123 0.9929144509670438 1.0181379519578568 0.8892973049995577 0.8452486098553291 0.7699522558695882 0.8874429672718961 0.8424869911644273 1.0408848618326878 1.0 12.452478176247938 -6.764045001116555 24.99904180218336 0.9008314017855189 0.9992378712006756 0.3319245052899542 0.07009423064079721 71.4133240412648 685168.9084392042 0.011126808350010765 0.021728567733919006 1.7216901661014935e-07 6.764045001116555 0.09840646941515674 SGRS(ph)PQEASSTK ddPTM_A549_PD325901_60min_R1 4 SGRSPQEASSTK 12 1 A0A1B0GVD3;Q6ZN17-2;Q6ZN17 A0A1B0GVD3 LIN28B Protein lin-28 homolog B 1 S(0.004)GRS(0.996)PQEASSTK;S(0.019)GRS(0.981)PQEASSTK;S(0.059)GRS(0.941)PQEASSTK;SGRS(1)PQEASSTK 144.15 2.4307e-12 105153200.0 15038.400000000001 13799.0 14592.199999999999 15092.400000000001 16231.5 16662.3 15410.9 16864.9 15415.2 16207.6 17109.3 True False 16565.08729731505 14961.890157594702 15582.51444202695 16024.623270672691 15091.455435635116 16526.607753167962 15997.370232668054 16528.5163392419 14767.352751802013 15184.249369993679 15004.964564788716 1.1039737698673002 0.9971293229645412 1.038490585882058 1.0679547560063387 1.0057641502899224 1.1014093156840903 1.0661384879380629 1.1015365126571786 0.9841644535739663 1.0119483657845938 1.0 13.873152291470392 -8.782916846496317 24.99818860047285 0.992522093399688 1.0574692476048475 0.3767496294561151 0.03489997915317453 156.48723601107235 182138.75234130918 0.00574174346039877 0.006115102118727464 1.6484779921247207e-09 8.782916846496317 0.06494715420515951 SGRS(ph)PTGNTPPVIDSVSEK ddPTM_A549_MK2206_60min_R1 1 SGRSPTGNTPPVIDSVSEK 19 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.132)GRS(0.857)PT(0.011)GNTPPVIDSVSEK 163.31 1.9482e-27 37089000.0 4838.9 6001.4 5084.3 3950.3 7673.5 5485.5 5645.7 4805.8 7170.7 7488.5 7437.8 True False 5655.588020253426 6306.845625948054 5805.33019204613 4918.123677335709 6544.738315023987 6065.9719690198 6671.450610875508 5487.036867145246 5546.5478992549 5796.842649010879 5590.788987162934 1.0115903199421903 1.1280779225310174 1.0383740479878254 0.8796832949031453 1.1706287484738602 1.084993903892266 1.1932932232273283 0.981442311585017 0.992086789895019 1.0368559182471502 1.0 12.448836179098317 SGRS(ph)SYK ddPTM_A549_PD325901_60min_R1 1 SGRSSYK 7 1 F8WBF5;P49759;P49759-3;A0A087WVK0;P49759-2 F8WBF5 CLK1 Dual specificity protein kinase CLK1 1 S(0.001)GRS(0.666)S(0.332)Y(0.001)K 53.493 0.012481 4015800.0 2058.3 1954.8 1891.0 1948.3 2002.1 2172.9 1573.0 1920.9 1992.1 1993.2 3520.8 True False 2267.2571007596252 2119.5378563711974 2019.3346315067608 2068.642066089661 1861.4794028700408 2155.2046228226995 1632.8613757786286 1882.5861425831024 1908.378964714358 1867.349011838359 3087.763920190077 0.7342715179533729 0.6864313176639238 0.6539796058574499 0.6699482601514171 0.6028567762898958 0.6979823194158021 0.5288167806812487 0.6096923829808899 0.6180456194322271 0.6047577017233262 1.0 11.592346737983458 -10.641694796897188 0.8348617534776854 1.0084833167514982 0.6422094139663582 0.0 0.1264821718018378 0.18729300851156566 0.22446223496229317 0.04332283711017933 0.010652117236684239 2.2819451595593313e-11 10.641694796897188 -0.36627390278513994 SGS(ph)DAGEARPPTPAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 2 S(0.102)GS(0.898)DAGEARPPT(0.19)PAS(0.81)PR;S(0.477)GS(0.523)DAGEARPPT(0.239)PAS(0.761)PR 83.039 4.7529e-05 6797900.0 1162.03 1245.73 1295.5500000000002 1062.52 1597.53 1343.02 1270.87 1091.06 1981.88 1891.46 2107.81 True False 1358.152255094152 1309.1323360569654 1479.278471039349 1322.8374476983354 1362.535453235195 1485.137484975476 1501.7706285922654 1245.7210962311146 1532.9873444120255 1464.1778723239793 1584.3826044034408 0.8572122991753812 0.8262728538034448 0.9336624038461554 0.8349229813693999 0.8599788014891916 0.9373603830589057 0.9478585692738776 0.7862501726343805 0.9675613328191224 0.9241314997113834 1.0 10.629705051154431 -8.933199805211085 10.304851276973583 0.9857271260324456 0.8762775434597454 0.3669172032585779 0.05142674501906521 0.2363761043957723 35.05543300819139 0.008155499951141629 0.008666230063934197 1.166272928176308e-09 8.933199805211085 -0.10944958257270021 SGS(ph)DAGEARPPTPAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 2 S(0.078)GS(0.922)DAGEARPPT(0.043)PAS(0.957)PR;S(0.355)GS(0.595)DAGEARPPT(0.1)PAS(0.949)PR 106.43 3.0739e-09 10925800.0 1422.8600000000001 1152.65 1469.84 1374.47 1792.78 1473.23 1274.25 1431.65 2035.84 1360.81 1528.1100000000001 True False 1567.3076997458295 1249.787860725527 1569.592181265942 1459.3678902521458 1666.8613175552427 1461.2325033278505 1322.7422810463545 1403.094617642302 1950.2807246243053 1274.888224362713 1340.1621574874057 1.1694910880667502 0.9325646555105568 1.1711957187395006 1.0889487381051202 1.243775843275822 1.0903400720308598 0.9870016651763166 1.0469588398712024 1.4552572714639074 0.9512940036696221 1.0 10.388191859710014 SGS(ph)DAGEARPPTPASPR ddPTM_A549_MK2206_60min_R1 1 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 S(0.108)GS(0.892)DAGEARPPTPASPR 80.53399999999999 0.00022176 3381200.0 359.01 600.98 570.76 455.83 948.67 549.34 578.82 538.43 718.94 790.1 820.43 True False 419.60211104820957 631.5673150068751 651.7023504537985 567.5083704629864 809.1218996955497 607.4707941776204 683.9841016325628 614.7541013727192 556.1012379112667 611.6158612517182 616.694588283913 0.68040504817116 1.0241168432568035 1.0567667737563617 0.9202421769942913 1.3120301605809572 0.9850431732635114 1.1091131892950405 0.9968534069407133 0.9017449617301483 0.9917645993192068 1.0 9.268412375980038 -5.2583345897448295 23.778480836506443 0.9972493060196279 0.6804048090443285 0.43364901291657465 0.109171545352929 116.30808591305387 890666.9392376513 0.015406808574202317 0.14937819592972484 5.516522708303293e-06 5.2583345897448295 -0.3168444969752994 SGS(ph)DAGEARPPTPASPR ddPTM_A549_PD325901_60min_R1 2 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 S(0.293)GS(0.702)DAGEARPPT(0.004)PAS(0.001)PR;S(0.186)GS(0.802)DAGEARPPT(0.012)PASPR 92.29 1.3559e-06 67404000.0 6415.1 7232.1 7055.2 7144.1 7608.0 7017.4 7394.700000000001 6846.4 7966.3 8065.2 9370.900000000001 True False 7066.356229452981 7841.574448057158 7534.008298364089 7585.374831571696 7073.640326175153 6960.252621011558 7676.109355035108 6709.843181103104 7631.504114554482 7555.961895584359 8218.338707029425 0.8598278169539163 0.9541556666860168 0.9167312965478042 0.9229815297200719 0.8607141392365378 0.846917226112647 0.9340220242406742 0.8164476325810163 0.9285944990350662 0.9194025903460863 1.0 13.004631074997542 -9.750161372654539 0.9727221806089427 0.9890373505372793 0.8930493688462072 0.1934444323398684 0.04589222842118412 0.2920610522730388 0.5715946509338033 0.013238774574895215 0.008146048147295871 1.777618769913528e-10 9.750161372654539 -0.09598798169107203 SGS(ph)DRLPSR ddPTM_A549_PD325901_60min_R1 1 SGSDRLPSR 9 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.449)GS(0.551)DRLPSR 59.57 0.005679200000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGS(ph)EEAVTDPGER ddPTM_A549_MK2206_60min_R1 2 SGSEEAVTDPGER 13 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 S(0.124)GS(0.874)EEAVT(0.002)DPGER;S(0.149)GS(0.85)EEAVTDPGER 95.273 0.00016999999999999999 17190500.0 1048.73 876.79 756.06 545.1500000000001 1125.8899999999999 1005.8699999999999 951.03 933.1800000000001 1443.28 1187.46 1560.6999999999998 True False 1225.7299850132001 921.4148659271156 863.2806767890164 678.7117744727132 960.2730724574641 1112.3104957575329 1123.8198406682843 1065.4611227438932 1116.379384444562 919.211961273213 1173.1351168712781 1.0448327455086257 0.7854294468522142 0.7358748914544169 0.5785452713092593 0.8185528321907951 0.9481520753756285 0.95796283352721 0.9082168860356437 0.9516204641643647 0.783551654070955 1.0 10.196153471271428 -7.230852723846834 3.9659184802230314 0.9681027235801474 0.7742819382730752 0.19269646854986688 0.11788202423668316 0.1643660635335607 5.797292622537593 0.01549287147919404 0.026866979999130146 5.8768861327984796e-08 7.230852723846834 -0.19382078530707214 SGS(ph)ESEEAELSLSLAR ddPTM_A549_PD325901_60min_R1 2 SGSESEEAELSLSLAR 16 0 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 S(0.187)GS(0.811)ES(0.001)EEAELSLSLAR;S(0.011)GS(0.988)ES(0.001)EEAELSLSLAR 101.9 1.181e-06 24406100.0 3731.2 3258.7 3223.2 3518.1000000000004 3751.8 3045.2 2807.1 3622.2000000000003 3630.6 3702.1 3654.5 True False 4109.988677235734 3533.322085408646 3441.945734676144 3735.4050468151895 3488.286511007354 3020.4009008328417 2913.92572660406 3549.952379439071 3478.018507751592 3468.3487741956633 3205.0196677842087 1.2823598926858306 1.1024338230820934 1.0739234361877519 1.1654858422125263 1.0883822480312522 0.9423969940630651 0.909175614706478 1.1076226505322295 1.085178522525611 1.0821614634875258 1.0 11.646117494712868 -2.000000000000153 0.588253787663816 1.0345986430100722 14.56335183389035 0.49722966980192385 0.06895397914476964 96.20734777175919 0.7077932313487196 0.012439668455044194 1672.923659026705 0.009999999999996472 2.000000000000153 13.528753190880277 SGS(ph)ESSVDQK ddPTM_A549_MK2206_60min_R1 2 SGSESSVDQK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.017)GS(0.753)ES(0.219)S(0.011)VDQK;S(0.259)GS(0.363)ES(0.363)S(0.015)VDQK 129.74 1.3063999999999999e-06 17787900.0 6835.8 8942.7 7227.5 5461.799999999999 7597.8 5335.0 4820.3 5640.4 7377.5 14228.0 15736.2 True False 7989.515920735784 9397.845232639997 8252.468179103003 6799.941245189521 6480.173684744797 5899.546158913611 5696.086115026163 6439.943973000545 5706.508029446646 11013.88491822484 11828.467242974188 0.675448116532711 0.7945108220358881 0.6976785757262642 0.5748793233737461 0.5478455958521471 0.49875829536728805 0.4815574155146344 0.5444445033083818 0.4824385029967571 0.9311337379546628 1.0 13.529975517958656 -10.815182532806066 1.0323048465751297 1.0028688903879635 0.583471346325603 0.6956169201505282 0.09575003449353098 0.2559327328003083 0.478768433944388 0.07871294522859773 0.01899952577836022 1.5304440849421398e-11 10.815182532806066 -0.4193975440623604 SGS(ph)ESSVDQK ddPTM_A549_PD325901_60min_R1 1 SGSESSVDQK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.072)GS(0.449)ES(0.116)S(0.362)VDQK 140.24 1.1509000000000001e-16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGS(ph)FDSR ddPTM_A549_MK2206_60min_R1 2 SGSFDSR 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.015)GS(0.97)FDS(0.016)R;S(0.18)GS(0.818)FDS(0.002)R 111.39 0.0081237 164409000.0 7492.200000000001 7640.799999999999 7121.3 6169.9 9809.3 7557.2 7432.9 8090.700000000001 10760.1 10712.2 11153.400000000001 True False 8756.700193296561 8029.684083504493 8131.207422185577 7681.525776977337 8366.364964301132 8356.897887936635 8783.361716984002 9237.581501729579 8322.954530348874 8292.30658005399 8383.702961819772 1.0444907498721574 0.9577729697810721 0.9698825756608882 0.91624498291027 0.997931940385102 0.9968027166509584 1.0476709106923654 1.101849808348227 0.9927539857092322 0.9890983277697205 1.0 13.033371887140852 -6.983496509696952 24.981192118186083 1.0090559525043759 0.9691878901846761 0.1998137422294065 0.042214046297481565 357.24592884252894 540756.8434908295 0.0062955776799958185 0.011895304170862264 1.0387319503866765e-07 6.983496509696952 -0.03986806231969975 SGS(ph)FDSR ddPTM_A549_PD325901_60min_R1 2 SGSFDSR 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.024)GS(0.959)FDS(0.017)R;S(0.055)GS(0.945)FDSR 104.2 0.010162000000000001 212350000.0 8959.1 8980.400000000001 10210.1 9013.099999999999 9762.4 8991.0 8927.0 9150.0 8979.900000000001 9764.8 8932.5 True False 9868.621236659163 9737.209824716538 10903.01878431898 9569.818716764721 9076.722702451663 8917.780276956553 9266.721870041834 8967.496071963868 8602.506031443432 9148.248861528808 7833.859127782855 1.259739430552179 1.242964631593059 1.3917813183098127 1.2215969882360111 1.1586527858614386 1.1383636253209561 1.1829063707792904 1.144709896577098 1.098118550655904 1.1677831720364307 1.0 12.935507469948908 -7.714308979633676 0.23578566782725352 0.9717769826855853 1.3721832071194402 0.4784967838195777 0.06869492538737149 0.9321507553657654 0.13305379598907108 0.05956979729607999 0.12509697473696715 1.9305943033201424e-08 7.714308979633676 0.4004062244338549 SGS(ph)FDSRDR ddPTM_A549_MK2206_60min_R1 1 SGSFDSRDR 9 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.132)GS(0.865)FDS(0.003)RDR 48.74100000000001 0.008836 14323000.0 587.49 613.09 480.7 730.88 650.08 409.44 453.43 318.9 988.08 1247.1 1374.5 True False 686.6439492485249 644.2936622808834 548.8704882317282 909.9456328104501 554.4540931557688 452.76666903572436 535.8123617070127 364.10505159029043 764.2814576395311 965.3792438514341 1033.1737157298478 0.6645968038041603 0.6236063233816839 0.5312470496251434 0.8807285928365418 0.5366513730598488 0.43822898525431797 0.5186082006824067 0.35241416428512384 0.7397414839378027 0.93438231069349 1.0 10.0128671310737 -9.571562654723571 1.1242812999419263 0.9461984705878522 0.5769477993965673 0.5415921775321704 0.1358329802678837 0.2309069775502255 0.604029043685768 0.03922290899860977 0.02829610072331091 2.681867672461856e-10 9.571562654723571 -0.36925067119128496 SGS(ph)FDSRDR ddPTM_A549_PD325901_60min_R1 1 SGSFDSRDR 9 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.209)GS(0.772)FDS(0.019)RDR 53.236999999999995 0.0062117 22340000.0 1396.9 1231.5 1096.5 1880.3 1718.6 2282.0 1946.0 2107.2 1946.8 1702.8 2125.2 True False 1538.7122596565723 1335.282826949626 1170.915083790144 1996.4418605288652 1597.8914648481357 2263.4161485946875 2020.0560948920606 2065.1702429335796 1864.9827661793643 1595.2849173983334 1863.8138727527703 0.8255718460684932 0.7164249856008812 0.6282360598919432 1.0711594594905602 0.8573235172287461 1.2144003120074014 1.083829305288155 1.1080345913958751 1.000627151371541 0.8559250152174093 1.0 10.864042079061983 -6.266846936057022 24.900762543635793 1.0228413960206937 0.7227123616321731 0.6102503312334999 0.10695143710297583 177.0185085264825 815137.8951547067 0.012953146547158505 0.03092664103793213 5.409449414771464e-07 6.266846936057022 -0.30012903438852057 SGS(ph)FGKLR ddPTM_A549_PD325901_60min_R1 2 SGSFGKLR 8 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 S(0.161)GS(0.839)FGKLR;S(0.125)GS(0.875)FGKLR 43.77 0.018418 13504000.0 1447.03 2026.98 2408.2 3217.1 2413.8 8315.6 4947.9 5055.299999999999 4448.5 2543.4 3562.0 True False 1593.9314203528154 2197.800718286928 2571.6349336830153 3415.8129604357864 2244.2630151579374 8247.880510628393 5136.195042094771 4954.468075693867 4261.545015075458 2382.8092899406392 3123.896581378394 0.5102382165447699 0.7035446472165753 0.8232138506161117 1.0934462365999924 0.7184178338476476 2.6402540211459504 1.6441629574780825 1.5859897876349505 1.3641760871594173 0.7627683016603719 1.0 11.609130977577893 -6.464259397487126 1.58466371603299 1.3325367596036353 0.6441997145941952 0.2962753334226025 0.49142098663116396 0.443306018199771 2.1526768176247644 0.07456018157895716 0.23392571624044436 3.433528072339335e-07 6.464259397487126 -0.68833704500944 SGS(ph)FSK ddPTM_A549_MK2206_60min_R1 1 SGSFSK 6 0 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5 Q07866-6 KLC1 Kinesin light chain 1 1 S(0.146)GS(0.807)FS(0.047)K 70.919 0.050181 11955000.0 6601.8 5185.1 4311.6 3661.1 8198.5 6181.4 6627.5 6438.0 8129.4 8432.5 10330.0 True False 7716.022441486509 5448.99944264726 4923.049713043312 4558.069664353025 6992.511510487279 6835.511645118765 7831.63096225046 7350.606215548104 6288.103879984216 6527.592393374405 7764.775906503688 0.9937212012807293 0.7017587510907096 0.634023411920983 0.5870188295498956 0.9005426035064877 0.880323106220415 1.0086100431682483 0.9466604450736718 0.8098242570938038 0.8406671965776846 1.0 12.922728573313167 -6.870716324001598 8.587166547701885 0.9163416426844428 0.7207183888752992 0.3868777124641891 0.11083964878534602 0.20556032658631282 14.94557069924539 0.016966368048403825 0.032139651325164366 1.346739741228706e-07 6.870716324001598 -0.1956232538091437 SGS(ph)GGGSAKEPQEER ddPTM_A549_PD325901_60min_R1 2 SGSGGGSAKEPQEER 15 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;F6UYG0 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 S(0.003)GS(0.994)GGGS(0.003)AKEPQEER;S(0.004)GS(0.996)GGGSAKEPQEER 166.92 7.2767e-21 34746000.0 3430.3999999999996 4217.9 3844.4 3795.8999999999996 5177.4 5047.700000000001 3898.0 5151.8 4501.0 4550.8 4654.4 True False 3778.651682672993 4573.35723572134 4105.304102255203 4030.3641218856146 4813.757285060358 5006.593204759602 4046.340523067443 5049.043307491085 4311.838622649126 4263.461711355616 4081.938306672543 0.9257003410600836 1.1203886222987491 1.0057241912609176 0.9873652708805954 1.1792822241314982 1.2265234867894919 0.9912791960753277 1.2369229831910158 1.0563213597816448 1.0444699040125975 1.0 11.995038662689218 -3.8075380433876975 10.2586482056815 1.0556004322872106 0.6426644377609735 0.0 0.10133562664001262 0.0 0.0 0.01299724762858127 0.0 0.0001557621584105734 3.8075380433876975 -0.4129359945262371 SGS(ph)GNFGGGR ddPTM_A549_PD325901_60min_R1 1 SGSGNFGGGR 10 0 F8W6I7;P09651-2;P09651;H0YH80;F8VZ49;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.042)GS(0.958)GNFGGGR 131.02 1.1587e-06 44626000.0 9524.2 10140.0 10933.0 11519.0 12000.0 11408.0 13047.0 11941.0 11289.0 13051.0 14910.0 True False 10491.089772654532 10994.533386333096 11674.979125469812 12230.502468452902 11157.161397752603 11315.097030310351 13543.510724592352 11702.827387466723 10814.56258855499 12226.957632702412 13076.164522277337 0.8023063456246121 0.8408072082300702 0.8928443126866153 0.9353279738577994 0.8532441893603124 0.8653223207029305 1.035740312193137 0.8949740092004108 0.8270439370910831 0.9350568824575306 1.0 13.67465181364708 -10.986945369600065 1.2332625518371712 1.0006367984846927 0.8810256355576626 0.19296177425347172 0.06218707577123455 0.44849106712302056 1.2030069503403236 0.045530598376554966 0.010208319905953242 1.030515742043453e-11 10.986945369600065 -0.11961116292703011 SGS(ph)GSESEPSSR ddPTM_A549_MK2206_60min_R1 2 SGSGSESEPSSR 12 0 O14641;I3L2N2;I3L0Z8 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 1 S(0.005)GS(0.961)GS(0.034)ESEPSSR;S(0.013)GS(0.79)GS(0.197)ESEPSSR 174.05 7.662000000000001e-16 23436000.0 1456.45 1630.1799999999998 1369.42 1250.35 1245.45 710.3299999999999 459.34999999999997 761.7 1074.45 1928.8 1943.26 True False 1702.2631532162482 1713.1491989382478 1563.6243478142155 1556.6858061303437 1062.245954837638 785.4966491211068 542.8079490772913 869.6733076084178 831.0887905440792 1493.0827403902217 1460.6949107524074 1.1653789854990377 1.1728316339897429 1.0704660749511266 1.0657159100585154 0.7272195904964662 0.537755450052534 0.3716093929550898 0.5953832666949233 0.568968088015028 1.0221728914090151 1.0 10.51243916457793 -6.7180266267523585 4.115025745585594 0.7192492163263252 1.1286148461718881 0.5580989963224274 0.18325559690175364 0.1631621487830638 5.83919242471193 0.03217622998557206 0.06763167985915773 1.9141385648930743e-07 6.7180266267523585 0.4093656298455629 SGS(ph)GSESEPSSR ddPTM_A549_PD325901_60min_R1 1 SGSGSESEPSSR 12 0 O14641;I3L2N2;I3L0Z8 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 1 S(0.06)GS(0.925)GS(0.015)ESEPSSR 237.53 1.7672000000000001e-50 17814000.0 1745.9 2171.8 2122.7 1973.4 2038.2 2214.6 1815.7 2387.6 1925.5 2047.4 2329.4 True False 1923.1424827363508 2354.825207932764 2266.7591868320474 2095.292436083423 1895.0438634082795 2196.565031848289 1884.7974570891631 2339.9774449640354 1844.5779311066187 1918.12681458853 2042.8985672832218 0.9413793291234569 1.1526882663902214 1.109579899430117 1.025646828305273 0.9276250391268476 1.0752198210062982 0.9226094174590803 1.1454202780492857 0.9029219368241358 0.9389241567384222 1.0 10.99640185872328 -7.155267081684479 0.6247141861867996 0.9634115540539366 1.0715993189030262 0.08927665934395324 0.08572898470138146 1.143061759304585 0.8254819618350732 0.017524597298492747 0.05738727115072127 6.994117406700068e-08 7.155267081684479 0.10818776484908954 SGS(ph)GSESTGAEER ddPTM_A549_PD325901_60min_R1 2 SGSGSESTGAEER 13 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.347)GS(0.554)GS(0.066)ES(0.03)T(0.003)GAEER;S(0.016)GS(0.967)GS(0.014)ES(0.002)TGAEER 89.01299999999999 0.00018923 136519000.0 505.23 509.6 542.04 569.65 643.15 588.3299999999999 318.01 560.72 612.05 669.46 767.04 True False 556.520577669332 552.5457804413556 578.8260939513083 604.8359867309836 597.977362747049 583.5388355401897 330.1120445717494 549.5359997236699 586.3276669612084 627.1901813492417 672.6989426671767 0.8272951574188443 0.8213864262229593 0.8604534023144544 0.8991183847158671 0.8889227034847641 0.8674591240273442 0.49072775893312953 0.8169122394407529 0.8716048588340042 0.9323489923479027 1.0 9.393817180350682 -9.729102758160899 1.0339831338019738 0.9777690127082495 0.8131808954165664 0.2259341275578678 0.10778715894512905 0.44121172689740534 0.9724081686639375 0.03445801766984962 0.022085807353694795 1.865938140077769e-10 9.729102758160899 -0.1645881172916831 SGS(ph)GSIDDDR ddPTM_A549_MK2206_60min_R1 1 SGSGSIDDDR 10 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9IYH5;B8ZZD2;A0A1U8QZH8;C9J1A6;C9J7G1;C9JZC0;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.102)GS(0.896)GS(0.002)IDDDR 102.52 0.00039631 3561500.0 302.56 345.0 385.0 173.22 404.93 291.75 225.99 283.96 309.58 381.18 477.76 True False 353.6247311182037 362.55902638585644 439.5987892016128 215.65890777614126 345.3653334075276 322.62279135202385 267.0494577380584 324.21219959102837 239.4606242976743 295.0711732589926 359.119006494792 0.9847006834023753 1.0095790527063466 1.2241033786887243 0.6005221218478415 0.9617016286007578 0.8983729223941884 0.7436238486640254 0.9027987762483691 0.6668001970570916 0.8216529003548347 1.0 8.488318199920561 -6.249162412518823 24.98928756217087 0.8362492579115414 1.066472822949234 0.4273454702616424 0.12745217024623778 697.5996080147485 1419933.8887471596 0.020411014804387114 0.05356421329463291 5.634269124238396e-07 6.249162412518823 0.2302235650376926 SGS(ph)GSVGNGSSR ddPTM_A549_PD325901_60min_R1 1 SGSGSVGNGSSR 12 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.012)GS(0.545)GS(0.444)VGNGSSR 64.65 0.006333 25450000.0 537.93 634.1 586.94 709.6 772.03 527.32 447.67 544.6 571.91 718.43 618.98 True False 592.5402575968643 687.5378323741434 626.7732779569426 753.4303803814726 717.805276158912 523.0256807523887 464.7063268244235 533.7375257695646 547.8746115705983 673.0682071919687 542.849384037507 1.0915371280147277 1.2665351616695202 1.1545988563075114 1.3879179060271642 1.3222917760726736 0.963482129909263 0.8560502056170992 0.9832147580233548 1.0092571303953881 1.2398802079979232 1.0 9.084408161204328 -7.268081433012933 24.962234289515568 0.9877944666968898 1.2487608021091319 0.514334168387587 0.11313654515783446 221.11043714728453 830978.8737701569 0.01262040385682835 0.020461912584032065 5.3940947028170806e-08 7.268081433012933 0.2609663354122421 SGS(ph)IKGSR ddPTM_A549_MK2206_60min_R1 2 SGSIKGSR 8 1 Q16629-4;Q16629;H7BZZ6;C9JAB2;H7C1N1 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 1 S(0.036)GS(0.964)IKGSR;S(0.231)GS(0.769)IKGSR 69.672 0.0019399999999999999 32461000.0 7952.8 8205.4 7278.900000000001 5358.299999999999 13533.5 7246.900000000001 7553.0 5112.9 14970.9 17292.0 17658.1 True False 9295.038212707728 8623.01981190292 8311.157471999011 6671.083740543229 11542.740077719043 8013.762147897102 8925.282332384422 5837.66923259955 11580.015053614738 13385.725190184434 13273.106431232603 0.700291093186431 0.6496610161742028 0.6261652097087266 0.5026015405742302 0.8696336564105386 0.6037593527495663 0.6724335692345969 0.4398118302481988 0.8724419647812138 1.008484732608399 1.0 13.696218437405532 -8.932419689620094 6.495047084702819 0.9446053249966413 0.6371224655073953 0.6549008415614805 0.10669777301749865 0.09396794025419997 6.8985127933253585 0.018347888731528584 0.019364906383369632 1.168369766556403e-09 8.932419689620094 -0.30748285948924603 SGS(ph)ISVK ddPTM_A549_MK2206_60min_R1 1 SGSISVK 7 0 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.016)GS(0.945)IS(0.04)VK 75.378 0.018159 55831000.0 7275.5 9269.6 7114.5 7776.4 9711.4 7762.4 6673.9 9266.0 9696.2 11745.0 10468.0 True False 8503.426531102894 9741.383046337205 8123.443079934734 9681.618349095865 8282.865924613792 8583.8120157359 7886.461241639132 10579.483875934879 7500.026181649689 9091.796342743237 7868.50669789745 1.080691274416161 1.238021828073198 1.0323995888705801 1.230426397385275 1.0526604656544378 1.0909073786554173 1.0022818235315831 1.3445351554141565 0.9531702100036055 1.155466556973595 1.0 12.94187414860878 SGS(ph)ISVK ddPTM_A549_PD325901_60min_R1 2 SGSISVK 7 0 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.063)GS(0.707)IS(0.23)VK;S(0.047)GS(0.804)IS(0.149)VK 98.03299999999999 0.011566 144115000.0 26620.0 26412.0 27372.0 27115.0 32274.0 28517.0 27000.0 28594.0 28023.0 28424.0 28171.0 True False 29322.442803391757 28637.831932922076 29229.628521207338 28789.831967367016 30007.185579255638 28284.7670067812 28027.499774966906 28023.67023844093 26845.29076260754 26629.30378912982 24706.145590682434 1.1868481344354376 1.1591379896879754 1.1830914058982502 1.1652903064824764 1.214563618153874 1.1448474187510815 1.134434332222873 1.1342793288245516 1.086583524899645 1.0778412881681017 1.0 14.592582332711041 -9.167299562660753 0.45443765145063286 0.9993307318389658 1.185578564107602 0.7763634184418889 0.027339716058801488 0.1504015491344193 0.07581195746625417 0.010203280565047941 0.006849599358595997 6.802999473339298e-10 9.167299562660753 0.18624783226863617 SGS(ph)KSTQTVAK ddPTM_A549_PD325901_60min_R1 2 SGSKSTQTVAK 11 1 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.127)GS(0.871)KS(0.002)TQTVAK;S(0.427)GS(0.572)KS(0.001)TQTVAK 92.935 8.1396e-05 22739000.0 6359.2 6970.6 6079.700000000001 6970.5 7376.4 6602.9 5463.3 6573.1 6848.3 7899.799999999999 8395.9 True False 7004.781302604387 7558.036925322831 6492.305002206057 7401.051953845904 6858.3071111985255 6549.12817158452 5671.208871132474 6441.994364002801 6560.48976660476 7401.005279811695 7363.257525995191 0.9513155390633504 1.0264528842893232 0.881716411423296 1.0051328406914037 0.9314229587904549 0.8894335351525497 0.7702037924262297 0.8748837510110208 0.8909765471930942 1.0051265019162021 1.0 12.846128444542696 -5.757642546030252 24.999859659536092 0.9261172435428439 0.9888842025899979 0.12893112285567576 0.0689409716377953 176.32159409925677 1160916.9569086735 0.010303529744322687 0.037063034864751744 1.747259675094535e-06 5.757642546030252 0.06276695904715401 SGS(ph)LKGPDDPR ddPTM_A549_MK2206_60min_R1 1 SGSLKGPDDPR 11 1 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 1 S(0.184)GS(0.816)LKGPDDPR 55.66 0.0046341 41065000.0 8010.8 9130.1 8491.1 8194.5 11879.0 9574.2 9394.5 9471.9 13036.0 14324.0 12874.0 True False 9362.827194743873 9594.783092189877 9695.265659713812 10202.15286786509 10131.614836016153 10587.33548916039 11101.359045622328 10814.570831477182 10083.366814214362 11088.198451549952 9677.030495675552 0.9675310208981889 0.991500760122392 1.001884376002164 1.0542648256016351 1.0469756027475314 1.0940686292031045 1.1471865310937355 1.1175505581293737 1.0419897734868555 1.1458265483926107 1.0 13.240348693070455 -6.0241585276285985 2.3648717890148805 1.045416866138538 0.9778660462231076 0.23605317312754293 0.05267294474896059 0.39325229251050725 4.2847573946674276 0.007788289109729202 0.029154357416275076 9.458918257346765e-07 6.0241585276285985 -0.06755081991543033 SGS(ph)LKGPDDPR ddPTM_A549_PD325901_60min_R1 3 SGSLKGPDDPR 11 1 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 1 S(0.115)GS(0.885)LKGPDDPR;S(0.175)GS(0.825)LKGPDDPR;S(0.181)GS(0.819)LKGPDDPR 110.38 7.0306e-05 120446900.0 21223.699999999997 23185.2 22697.9 22327.699999999997 26669.4 25704.8 24522.6 23195.9 25755.0 25924.8 26383.3 True False 23378.31439993784 25139.098172466493 24238.315987560727 23706.83131911415 24796.23334843527 25495.46863119929 25455.82096228161 22733.239577668475 24672.606915425073 24287.903703645967 23138.321357518413 1.0103721025700703 1.0864702665346102 1.0475399495514781 1.024570060758146 1.0716522156166763 1.101872008658699 1.1001585019481184 0.9824930351000457 1.0663092855440923 1.0496830486691298 1.0 14.497996582930508 -11.003192897804972 0.6206411701977479 0.9869026893780446 1.057540714437135 0.01725876682751415 0.03844613461870253 1.5242731508155067 0.7175810940813586 0.06342660489980835 0.007174337035017531 9.926750403586366e-12 11.003192897804972 0.07063802505909034 SGS(ph)LLQVEETEREEGLGAGR ddPTM_A549_MK2206_60min_R1 2 SGSLLQVEETEREEGLGAGR 20 1 Q8WYL5;Q8WYL5-4;Q8WYL5-2;Q8WYL5-5 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 S(0.175)GS(0.825)LLQVEETEREEGLGAGR;S(0.124)GS(0.876)LLQVEETEREEGLGAGR 152.35 3.1277e-22 22681000.0 1015.76 1538.75 1439.8600000000001 1610.44 2430.4 2059.15 1899.8200000000002 2138.16 2696.1 2685.5 3034.3 True False 1187.19545505231 1617.0658024673514 1644.053799012557 2004.9978722953977 2072.8913795314115 2277.047886246855 2244.9927023316004 2441.2507278403755 2085.4376547869992 2078.843684839248 2280.7995675802663 0.5205172220862104 0.7089907528274921 0.7208234438402484 0.879076750449637 0.9088441654391282 0.9983551025759833 0.9843007400748265 1.0703486455104576 0.9143449886740687 0.9114539104568157 1.0 11.155323955528202 -5.806985929310718 0.8275747673118198 0.9732146247026429 0.46595150717890144 0.8972016981536166 0.04947916754350151 0.28890180559222256 0.2271184394890493 0.00814401914629151 0.11210579340921197 1.559603031523691e-06 5.806985929310718 -0.5072631175237414 down SGS(ph)LLQVEETEREEGLGAGR ddPTM_A549_PD325901_60min_R1 2 SGSLLQVEETEREEGLGAGR 20 1 Q8WYL5;Q8WYL5-4;Q8WYL5-2;Q8WYL5-5 Q8WYL5 SSH1 Protein phosphatase Slingshot homolog 1 1 S(0.034)GS(0.965)LLQVEETEREEGLGAGR;S(0.167)GS(0.833)LLQVEETEREEGLGAGR 214.05 4.0844e-67 47465000.0 4168.9 5263.8 4926.2 4739.0 5774.1 6412.5 6076.200000000001 5950.6 5636.7 5798.5 6073.700000000001 True False 4592.123659018029 5707.398899307707 5260.521555647071 5031.717266950108 5368.547135563607 6360.278726057599 6307.433116024224 5831.910614844607 5399.80910115226 5432.381720421799 5326.673404356529 0.8620997216127924 1.0714752841125559 0.9875810203314972 0.944626577412239 1.0078611410965859 1.1940433068142895 1.1841223662906684 1.0948504201655875 1.0137300884142653 1.0198450905547944 1.0 12.37901911195506 -5.2531670355160625 24.02022228908279 1.0330297931900265 0.862099574019776 0.3059968470055696 0.07758024002346099 673.9313672891507 1956799.638190978 0.011642750138552618 0.17889503119518876 5.582554408678356e-06 5.2531670355160625 -0.17093021917025053 SGS(ph)LSGR ddPTM_A549_MK2206_60min_R1 1 SGSLSGR 7 0 Q16512;Q16512-2;Q16512-3 Q16512 PKN1 Serine/threonine-protein kinase N1 1 S(0.052)GS(0.648)LS(0.299)GR 86.67 0.013046 35723000.0 1889.6 2806.7 1688.0 1173.5 3812.1 3174.6 3044.4 3542.2 4021.0 4266.5 4583.6 True False 2208.5182837154885 2949.5490416150237 1927.3837822657733 1461.0075526804176 3251.3451398583334 3510.5340648710685 3597.528072648103 4044.317697532542 3110.249920217547 3302.6946867870615 3445.3656190755373 0.6410112968817746 0.8560917382133884 0.5594134252674554 0.4240500760184738 0.9436865341248561 1.0189148128241372 1.0441643849727025 1.1738428209595113 0.902734358001776 0.9585904812253982 1.0 11.75044137320514 -6.87393827765128 7.661178275122444 0.9826720908815971 0.6335673556895179 0.7170819577690963 0.11607337684872183 0.10919344778081809 6.963113452234803 0.017654265272748867 0.03349740133424824 1.3367854882836396e-07 6.87393827765128 -0.3491047351920792 SGS(ph)LSGR ddPTM_A549_PD325901_60min_R1 2 SGSLSGR 7 0 Q16512;Q16512-2;Q16512-3 Q16512 PKN1 Serine/threonine-protein kinase N1 1 S(0.034)GS(0.883)LS(0.083)GR;S(0.028)GS(0.486)LS(0.486)GR 97.431 0.011642 130883000.0 10861.1 10650.6 9664.400000000001 9650.7 11251.7 10087.6 9217.9 9658.8 9440.0 10961.1 13030.8 True False 11963.710876480773 11548.163440283952 10320.284300758303 10246.801820670056 10461.419408257752 10005.449930133123 9568.692228728425 9466.147656817988 9043.269628484288 10269.014275366975 11428.094209047056 1.0468684154712073 1.0105064964499368 0.9030625852373745 0.8966325997346234 0.9154124228321433 0.8755134274455232 0.8372955327191269 0.8283225079929869 0.7913191353747486 0.8985762706819047 1.0 13.480297214037945 -5.714577494497297 2.7701783534274065 0.8885860246097343 1.0437146969994908 0.5467982715209334 0.051569620875554556 0.24117696576021838 3.582744946438795 0.01089718059711446 0.05453269938397491 1.9294010276396544e-06 5.714577494497297 0.15512867238975647 SGS(ph)PDREGR ddPTM_A549_MK2206_60min_R1 1 SGSPDREGR 9 1 D6RJH4;A1IGU5 D6RJH4 ARHGEF37 Rho guanine nucleotide exchange factor 37 1 S(0.14)GS(0.86)PDREGR 49.3 0.02535 4054200.0 605.31 420.47 301.68 154.04 146.53 0.0 0.0 0.0 0.0 664.52 548.46 True False 707.4715295913539 441.8701270274233 344.4627603281624 191.77980691511831 124.97563110711724 0.0 0.0 0.0 0.0 514.4044704708162 412.26224527405765 1.7160715969056333 1.0718180771893953 0.8355428232317891 0.4651888673134008 0.3031459527030853 0.0 0.0 0.0 0.0 1.2477603185051738 1.0 8.68741853591482 -5.516863898973095 1.1931564812878102 0.3840530757230537 1.9687403811234796 0.5175443127344063 0.40007964444123767 0.6995585212531845 1.1090271016528492 0.0655526986232436 1.216668324101898 3.041838140321978e-06 5.516863898973095 1.584687305400426 SGS(ph)PDREGR ddPTM_A549_PD325901_60min_R1 2 SGSPDREGR 9 1 D6RJH4;A1IGU5 D6RJH4 ARHGEF37 Rho guanine nucleotide exchange factor 37 1 S(0.08)GS(0.92)PDREGR;S(0.171)GS(0.829)PDREGR 64.297 0.0052645 15281600.0 1027.95 780.63 779.9200000000001 845.96 660.61 790.26 594.93 843.95 670.1800000000001 965.79 899.5699999999999 True False 1132.3067272632063 846.4164297212232 832.8500612399537 898.2130278854436 614.2110325807794 783.8243845698679 617.5703867081877 827.1167551840326 642.0146652137282 904.8098545772477 788.9285928440663 1.4352461522294067 1.072868238518159 1.055672298854769 1.1385225938477015 0.7785381822283373 0.9935302024536874 0.7827963041393431 1.0484050935488332 0.813780449887464 1.1468843476891015 1.0 9.623750915347042 -2.0000000000014575 0.6091286991335347 0.9129060435561658 34.9666225442893 0.5198420144773752 0.12630239968649346 71.61788023218257 0.4917013164070703 0.017780309749042773 3264.7064612920553 0.00999999999996644 2.0000000000014575 34.05371650073314 SGS(ph)PDVKGPPPVK ddPTM_A549_MK2206_60min_R1 1 SGSPDVKGPPPVK 13 1 C9JR56;Q9UPW6-2;Q9UPW6;F8WCV6 C9JR56 SATB2 DNA-binding protein SATB;DNA-binding protein SATB2 1 S(0.205)GS(0.795)PDVKGPPPVK 70.529 0.00076157 4173800.0 1206.3 1442.5 1383.1 1379.5 2136.8 1054.9 1035.8 1350.6 1896.8 2092.3 1876.6 True False 1409.8939487965674 1515.917088584342 1579.2443775188324 1717.4775619281088 1822.4795506018434 1166.5288178140524 1223.991452387631 1542.0516860390298 1467.1778285671826 1619.6479768345405 1410.5884284748138 0.9995076666841815 1.074670015706434 1.1195642510880204 1.217561073987482 1.291999504470899 0.8269802830265319 0.867716924142828 1.0931974592378866 1.0401175842294095 1.1482073325851472 1.0 10.46208139462897 -7.255875969758427 24.998967183885764 1.0009732276540915 1.1400945948614745 0.2991598113696964 0.11007846154972918 471.1283176118567 2116994.191066041 0.015604049774447145 0.02655235402165462 5.5478413123833753e-08 7.255875969758427 0.139121367207383 SGS(ph)PISSEERR ddPTM_A549_PD325901_60min_R1 2 SGSPISSEERR 11 1 H8Y6P7;P0CAP2;P0CAP1-11;P0CAP2-2;P0CAP2-3 H8Y6P7 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A 1 S(0.06)GS(0.932)PIS(0.008)S(0.001)EERR;S(0.109)GS(0.872)PIS(0.018)S(0.001)EERR 87.49799999999999 0.00012858 20715400.0 2185.4 2294.8999999999996 1839.3000000000002 1935.26 2628.8 2505.7 2540.8 2549.5 2413.7 2537.0 2537.5 True False 2407.2601991935508 2488.2992769522502 1964.1259586094047 2054.7966149056488 2444.1621568676705 2485.294409962186 2637.4915343791085 2498.648222455941 2312.260582867851 2376.81338703287 2225.403586537811 1.0817184863706744 1.1181339384931257 0.8825931487174015 0.9233366151361402 1.0983006280987417 1.1167836813944845 1.185174478163939 1.1227843064382008 1.0390297727816502 1.0680370074942749 1.0 11.119851283436176 SGS(ph)PKLDPSEVYLK ddPTM_A549_MK2206_60min_R1 2 SGSPKLDPSEVYLK 14 1 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 S(0.127)GS(0.873)PKLDPSEVYLK;S(0.113)GS(0.887)PKLDPSEVYLK 126.19 9.106799999999999e-08 70814000.0 5686.799999999999 6442.5 6527.4 5378.4 7688.2 6055.9 4970.4 5333.9 8930.7 8591.599999999999 9222.7 True False 6646.592811088715 6770.395731857623 7453.083471778205 6696.108241445547 6557.275964496955 6696.731318418919 5873.457342100296 6089.996659383663 6907.910709397374 6650.7515928746525 6932.4490564290045 0.9587654747963575 0.9766239429597976 1.075101080601 0.9659080343671216 0.9458815940978142 0.9659979127013583 0.8472413276017338 0.8784769436907627 0.9964603638870055 0.959365375603718 1.0 12.759149394223662 -4.126733364895598 15.787659610759077 0.9769633283634065 0.9726680780459179 0.0 0.05948162861163882 0.0 0.0 0.008326909948333459 0.0 7.469071813477175e-05 4.126733364895598 -0.004295250317488564 SGS(ph)PKLDPSEVYLK ddPTM_A549_PD325901_60min_R1 2 SGSPKLDPSEVYLK 14 1 Q5TCQ9;Q5TCQ9-1;Q5TCQ9-3;Q5TCQ9-2 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 S(0.002)GS(0.998)PKLDPSEVYLK;S(0.116)GS(0.884)PKLDPSEVYLK 170.5 4.2275e-23 168691000.0 10382.2 10551.8 10898.900000000001 11311.0 11883.3 12856.3 12606.8 12674.2 13197.599999999999 11558.3 12515.0 True False 11436.193301028316 11441.037217545316 11638.564894409848 12009.65478085518 11048.658003159466 12751.602555292673 13086.558672705667 12421.403138282443 12642.950767890266 10828.506965448178 10975.734339121449 1.0419524514424174 1.0423937810489237 1.0603905428838445 1.0942005709858036 1.0066440806405172 1.1617994897928055 1.192317367418459 1.1317149955067802 1.151900217083996 0.9865861026584344 1.0 13.422029847051968 -7.240523025645458 24.67375307093106 1.0940777530580104 1.0518738530164735 0.1486595200460351 0.06288551050467302 1616.9412157982988 1907409.781370486 0.010898560333506144 0.018862847603105644 5.7474734579096664e-08 7.240523025645458 -0.042203900041536846 SGS(ph)PLEK ddPTM_A549_MK2206_60min_R1 1 SGSPLEK 7 0 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.051)GS(0.949)PLEK 81.163 0.01554 17937000.0 6050.8 6511.1 5582.5 5266.1 8257.9 6250.9 5850.5 6971.7 7824.7 9187.1 8390.6 True False 7072.027112143135 6842.487178843333 6374.1824434233895 6556.29473640421 7043.173849173984 6912.366088988396 6913.460119901369 7959.959824935802 6052.4179434782955 7111.727729281941 6306.982451220702 1.1213012192184488 1.084906646207488 1.010654856379009 1.0395295669698992 1.1167264065893816 1.0959862568906502 1.0961597203371454 1.2620868833074317 0.9596376698823482 1.1275959278918688 1.0 12.62273420366913 SGS(ph)PLEK ddPTM_A549_PD325901_60min_R1 2 SGSPLEK 7 0 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.26)GS(0.74)PLEK;S(0.233)GS(0.767)PLEK 85.71600000000001 0.013478 63315000.0 14775.400000000001 15961.300000000001 14596.2 15108.2 16353.7 13710.8 12805.5 13569.0 14975.4 15690.5 14828.6 True False 16275.38773092542 17306.414767187223 15586.785906080893 16041.399200788277 15205.072529202236 13599.143790601247 13292.820309938468 13298.355650325417 14346.036016356315 14699.799152242524 13004.776206240222 1.2514931032120205 1.330773747485397 1.1985431858951727 1.2335005959649625 1.1691914023023497 1.0457037918173342 1.0221491011556225 1.0225747401900176 1.103135939353766 1.1303384940364418 1.0 13.666753952307829 -6.983429603592247 1.690999472520679 1.0442733853592985 1.2641501216309918 0.8050933646814882 0.045990537204932534 0.1107045378982094 0.6311115255619805 0.007183114286124778 0.015550637001497886 1.03889198664109e-07 6.983429603592247 0.21987673627169335 SGS(ph)PLEKDSDGLR ddPTM_A549_MK2206_60min_R1 2 SGSPLEKDSDGLR 13 1 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.226)GS(0.77)PLEKDS(0.003)DGLR;S(0.176)GS(0.824)PLEKDSDGLR 111.7 1.1376e-05 54140000.0 8447.2 8770.3 9318.0 8723.7 13204.2 9624.9 8857.0 8351.599999999999 15249.0 15249.099999999999 15380.400000000001 True False 9872.88084578824 9216.670809019934 10639.43251371592 10861.006891621775 11261.879671497965 10643.400529508457 10466.202253135025 9535.464875702315 11795.12584764918 11804.317719040097 11561.022202554632 0.8539799226063796 0.7972193675904654 0.9202847574641739 0.9394503964555855 0.9741249064472374 0.9206279810756346 0.9053007657767767 0.8247942706653802 1.0202493898024707 1.0210444640813598 1.0 13.49698134324948 -2.0000000000010947 0.1419463404268546 1.0421470961473613 0.2906464208357286 0.41995995156079924 0.05548645944948477 43.616113017296364 0.3929061497479405 0.12880805060367512 6.723568340508486 0.009999999999974795 2.0000000000010947 -0.7515006753116327 SGS(ph)PLEKDSDGLR ddPTM_A549_PD325901_60min_R1 1 SGSPLEKDSDGLR 13 1 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.03)GS(0.97)PLEKDSDGLR 149.19 2.853e-13 62401000.0 7077.3 7594.3 7501.4 7097.0 8701.3 8279.6 8695.7 8147.9 8416.3 8388.5 7995.1 True False 7795.7822859671105 8234.298313198173 8010.490113582662 7535.365571543559 8090.150705855391 8212.173682692635 9026.619621969625 7985.383742596099 8062.592179471643 7858.848678409629 7011.75338511466 1.1118163828346952 1.1743565212488603 1.1424375150712278 1.0746763552095946 1.1537985239227144 1.1712011577769352 1.2873555480619654 1.1388569026897568 1.1498681908276782 1.1208107654061648 1.0 12.775559539697234 -10.440827912108578 0.7760503432020137 0.9994672484594118 1.1576941960132539 0.1887654976938895 0.0602195083494611 0.38583158951484703 0.4187421019688255 0.03509281497124384 0.010198336417160253 3.6238656456492334e-11 10.440827912108578 0.15822694755384203 SGS(ph)PSDNSGAEEMEVSLAKPK ddPTM_A549_MK2206_60min_R1 2 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.041)GS(0.804)PS(0.155)DNSGAEEMEVSLAKPK;S(0.032)GS(0.829)PS(0.139)DNSGAEEMEVSLAKPK 238.59 1.5206999999999998e-86 39089000.0 7732.6 8454.400000000001 7760.7 7912.2 12172.400000000001 9364.5 9674.3 10048.4 16522.8 18116.0 16511.9 True False 9037.673836080854 8884.692848337922 8861.283956771322 9850.689355192158 10381.856084680772 10355.44517434799 11431.995083832468 11472.791471934379 12780.412181489803 14023.583017891571 12411.539524743293 0.7281670269883606 0.7158413209437596 0.7139552622868193 0.7936718354362167 0.8364680355715581 0.8343401037158741 0.9210779259931426 0.9243648984126865 1.0297201371361817 1.129882637841547 1.0 13.599394457705598 -7.508531431172751 0.6543174975061573 1.0173651598327347 0.7114757984925429 0.8978590844356595 0.04218686110189461 0.10926831498474454 0.09275397037974764 0.006020429748094215 0.014240809247703209 3.1007629690486905e-08 7.508531431172751 -0.30588936134019173 SGS(ph)PSDNSGAEEMEVSLAKPK ddPTM_A549_PD325901_60min_R1 2 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.128)GS(0.737)PS(0.128)DNS(0.008)GAEEMEVSLAKPK;S(0.098)GS(0.463)PS(0.098)DNS(0.342)GAEEMEVSLAKPK 159.56 3.2767e-28 152944000.0 8983.3 9838.0 9194.8 9583.8 10016.7 10251.0 9573.599999999999 10553.3 11868.5 10881.0 12752.4 True False 9895.278002844068 10667.082786464003 9818.8144208241 10175.769559610986 9313.161547739048 10167.519254708224 9937.928586874938 10342.806152596306 11369.708218820526 10193.971803036922 11183.935644124043 0.8847760142506698 0.9537861380728178 0.8779391024109506 0.909855875731658 0.8327266754822676 0.9091181832801554 0.8885895719630907 0.924791279358831 1.0166106619894657 0.9114834104390398 1.0 13.449140343679243 -8.649683996197407 3.774434239220296 1.0079474074470094 0.8949579994129254 0.38335530456509825 0.04017743842502102 0.07363772528252541 1.996246686267848 0.004658098019005506 0.005262223016189256 2.2403506822581635e-09 8.649683996197407 -0.11298940803408397 SGS(ph)PVATFK ddPTM_A549_PD325901_60min_R1 1 SGSPVATFK 9 0 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 S(0.083)GS(0.917)PVATFK 143.28 3.6015e-05 20867000.0 12640.0 13850.0 13845.0 12031.0 14662.0 14186.0 13758.0 14375.0 13250.0 13426.0 16363.0 True False 13923.203494923811 15017.18810657922 14784.604956748344 12774.12754561654 13632.191701154054 14070.473919353302 14281.568218666469 14088.279348030661 12693.14857811618 12578.280068704504 14350.454733603234 0.9702273379756416 1.0464607836722242 1.0302534122579752 0.8901548963256515 0.9499484130793929 0.9804897601192857 0.995199698113018 0.9817305172247497 0.884511941520133 0.8765074209983758 1.0 13.80880883293264 -6.230212551143514 24.815576466302314 0.9503777312911912 1.0187285545933558 0.31654593268676245 0.045763700667416404 646.9390699886557 514113.66849758563 0.0069356660622206506 0.0183481728322734 5.88555535715728e-07 6.230212551143514 0.06835082330216458 SGS(ph)S(ph)PEVDSK ddPTM_A549_PD325901_60min_R1 1 SGSSPEVDSK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.353)GS(0.601)S(0.713)PEVDS(0.333)K 57.003 0.007225799999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGS(ph)S(ph)PEVK ddPTM_A549_MK2206_60min_R1 2 SGSSPEVK 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.091)GS(0.91)S(0.999)PEVK;S(0.079)GS(0.925)S(0.996)PEVK 46.461999999999996 0.044351999999999996 3692200.0 2278.9 2208.3 2284.9 1739.3 2470.6 1657.6 1789.6 1590.7 2973.2 3009.4 2988.5 True False 2663.5226062442975 2320.6930375880765 2608.933177783807 2165.428578080143 2107.17801278403 1833.006131774171 2114.7471550423875 1816.1865963144407 2299.7749472247715 2329.5744498809277 2246.37297159596 1.1856991870552864 1.0330844730291227 1.1613980451030188 0.9639666277420044 0.9380356866059348 0.8159847696493125 0.9414051815001774 0.8084973507422997 1.0237725330139062 1.037038140743768 1.0 11.13338176698635 -6.27086214283143 24.17789078069563 0.9702767359548096 1.117362957838569 0.47993635947460156 0.08191215079317109 344.7271032703789 884537.4459042222 0.012489300662471104 0.02940460895476414 5.359667612968453e-07 6.27086214283143 0.14708622188375953 SGS(ph)S(ph)PEVKDKPR ddPTM_A549_PD325901_60min_R1 1 SGSSPEVKDKPR 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.163)GS(0.897)S(0.94)PEVKDKPR 61.641000000000005 0.006646600000000001 40376000.0 6795.8 6444.9 7185.5 5761.4 8385.5 6779.8 7710.4 6931.0 6954.4 7680.6 8302.3 True False 7485.704613196461 6988.0343413785195 7673.151239921644 6117.268592911236 7796.53140840454 6724.587556635526 8003.8234912927755 6792.755767735685 6662.130752577445 7195.645605220604 7281.169732615908 1.0280909370460547 0.9597406183344014 1.0538349635704631 0.8401491542641848 1.0707800662138223 0.9235586868017677 1.0992496789959103 0.932920947757559 0.914980833743583 0.9882540676105653 1.0 12.829954525179678 SGS(ph)S(ph)PGLR ddPTM_A549_PD325901_60min_R1 1 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.224)GS(0.936)S(0.839)PGLR 78.264 0.0049677 40717000.0 4143.6 3290.4 3547.9 3521.4 4591.4 3918.0 3150.6 3517.5 3067.1 3732.4 4992.0 True False 4564.255221642902 3567.6935556598064 3788.6818292558614 3738.908880320343 4268.9159034701115 3886.0931070087618 3270.497807074474 3447.3407030746325 2938.2004531275593 3496.735627024631 4378.015646895271 1.0425397234200626 0.8149111020628454 0.8653879142580626 0.8540190766499066 0.9750800928492503 0.8876380123868761 0.7470274368237564 0.7874208274059872 0.6711260740265339 0.7987033188207969 1.0 12.096061395338523 -7.547105990156526 24.616244668225846 0.828384781256131 0.902642522372587 0.2122023428513936 0.09516851676698598 440.658828670515 447732.1350536861 0.020163977035623445 0.029908819130374957 2.8372265149667922e-08 7.547105990156526 0.074257741116456 SGS(ph)SFSR ddPTM_A549_PD325901_60min_R1 1 SGSSFSR 7 0 A6PW57;Q99755-4;Q99755-3;Q99755 A6PW57 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha 1 S(0.013)GS(0.58)S(0.407)FSR 68.22399999999999 0.022930000000000002 156200000.0 7398.1 7738.0 8891.1 8645.4 9861.2 8523.6 9199.6 9648.1 9294.1 8915.0 11016.0 True False 8149.14966580663 8390.108416513362 9494.50351252764 9179.406722872016 9168.583331293166 8454.186627590578 9549.69581221428 9455.661076711976 8903.501298103369 8352.105378556584 9661.101836177537 0.8435010627142796 0.8684421879391916 0.9827557636308064 0.9501407684678639 0.9490204623410493 0.8750747865975832 0.9884686005952159 0.9787352661270732 0.9215823877109739 0.864508574713579 1.0 13.237972020611238 SGS(ph)SPEVK ddPTM_A549_MK2206_60min_R1 2 SGSSPEVK 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)GS(0.499)S(0.499)PEVK;S(0.018)GS(0.781)S(0.2)PEVK 157.59 0.00034637 137060000.0 12793.0 10878.0 10278.0 8394.6 10412.0 6890.5 8119.1 7897.2 9697.4 14332.0 15862.0 True False 14952.145641179217 11431.643736305352 11735.574949127737 10451.277376847918 8880.408592692998 7619.648136456276 9594.23537466733 9016.652284160691 7500.954383565693 11094.391245993706 11923.027631070821 1.2540561092230185 0.9587869868316881 0.9842780971626206 0.8765623715919608 0.7448115417891922 0.6390699050801366 0.8046811323044515 0.7562384792822034 0.6291149040046319 0.9305011771575761 1.0 13.541463007438866 -5.062946630092529 0.8797135264223056 0.7983619250119908 1.613635805749739 0.598334999777616 0.11031544493099496 2.0458416660196646 0.926834931414232 0.022489288197037934 1.737926669705569 8.650742201364118e-06 5.062946630092529 0.8152738807377483 SGS(ph)SPEVK ddPTM_A549_PD325901_60min_R1 1 SGSSPEVK 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGS(0.5)S(0.5)PEVK 137.28 0.0010875 194160000.0 22721.0 20745.0 19632.0 17563.0 21944.0 20217.0 17485.0 19781.0 24333.0 23767.0 24575.0 True False 25027.61919368385 22493.25395458383 20964.345576806314 18647.826621532968 20402.729142690252 20052.359454924983 18150.40124315914 19386.45243710569 23310.36863028686 22266.347563898395 21552.430793760275 1.16124345477215 1.043652763339156 0.9727137406178694 0.8652307853335861 0.9466555924910857 0.9303989720143501 0.8421510045360605 0.8995018994664089 1.0815656411728523 1.0331246520158093 1.0 14.39556297259158 -8.765636957072472 24.993615910869604 1.0385171072650738 0.9528482501924412 0.150603670110941 0.08461321176199538 147.94180876378437 880886.4960029264 0.015703878450305405 0.017010800615992312 1.71539066725354e-09 8.765636957072472 -0.08566885707263261 SGS(ph)SPEVKDKPR ddPTM_A549_MK2206_60min_R1 1 SGSSPEVKDKPR 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.1)GS(0.45)S(0.45)PEVKDKPR 40.941 0.020597999999999998 3809900.0 1121.2 1367.9 1364.3 1031.8 1662.2 1281.8 1589.3 1793.8 1964.5 2158.8 2325.6 True False 1310.43114929181 1437.5202672267037 1557.778254825351 1284.591046319263 1417.6925819030262 1417.439225210022 1878.0552377675833 2048.0766432821038 1519.5438866618676 1671.125580648286 1748.0893367052254 0.749636258156973 0.8223379875631082 0.8911319473874431 0.73485434602584 0.8109954978474233 0.8108505643547896 1.074347402237071 1.1716086817063311 0.8692598568937461 0.9559726414200319 1.0 10.77156320080962 -7.690881545098061 10.830139454137056 0.9671587560985012 0.8051667465682043 0.57996129554178 0.08520009272487736 0.3790184087637491 56.23671106797635 0.014910762421116728 0.022115589825051206 2.0375977617861565e-08 7.690881545098061 -0.1619920095302969 SGS(ph)SPEVKDKPR ddPTM_A549_PD325901_60min_R1 2 SGSSPEVKDKPR 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)GS(0.691)S(0.307)PEVKDKPR;S(0.109)GS(0.561)S(0.33)PEVKDKPR 136.17 6.4631e-09 168372000.0 11601.4 11417.0 12319.5 13786.900000000001 12615.900000000001 20253.5 16364.0 18084.9 14600.5 13975.7 15969.599999999999 True False 12779.16558750071 12379.15065796499 13155.575353171631 14638.485500678305 11729.802706492259 20088.562211026532 16986.7409747244 17724.1824821704 13986.89175960644 13093.271916892118 14005.440439635155 0.9124429640453072 0.8838815681177872 0.939318931801786 1.0451999395357567 0.8375175887576601 1.4343399122369795 1.212867317378482 1.2655212493004697 0.9986756089457763 0.9348704150594496 1.0 13.773699733192935 -6.468088676118106 1.5515265076478326 1.0614947727007955 0.9039882498592066 0.19548064341943927 0.1582385600646175 0.6629532554196692 3.083247585003894 0.025100093937235533 0.07949699064328025 3.4033869078600174e-07 6.468088676118106 -0.15750652284158895 SGS(ph)SPKWTHDK ddPTM_A549_MK2206_60min_R1 1 SGSSPKWTHDK 11 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;H0YF14;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.1)GS(0.5)S(0.397)PKWT(0.003)HDK 66.215 0.002221 12516000.0 1993.4 2834.4 1804.9 2139.9 2334.4 2101.3 1732.8 1320.8 3761.0 5018.4 5007.5 True False 2329.837186049139 2978.6588532987575 2060.861960077898 2664.175596063762 1991.0128523609822 2323.6581712699476 2047.6273302734967 1508.0274447803574 2909.139505082862 3884.739954569832 3763.9995500307114 0.6189791351144368 0.7913547315048043 0.5475191834337714 0.7078044406360315 0.5289620325126598 0.6173375263158541 0.5440030752014275 0.4006449588358886 0.7728851893882733 1.0320776883562952 1.0 11.878050740260816 -9.454065625625898 1.2216067150617245 0.946389822944756 0.6038344166444409 0.6686586088582358 0.10867793714679397 0.17884287509450855 0.5528764061169418 0.027845121598542445 0.02177752078608118 3.515073207400939e-10 9.454065625625898 -0.3425554063003151 SGS(ph)SPKWTHDK ddPTM_A549_PD325901_60min_R1 2 SGSSPKWTHDK 11 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;H0YF14;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.098)GS(0.522)S(0.38)PKWTHDK;S(0.084)GS(0.511)S(0.404)PKWT(0.002)HDK 98.58200000000001 0.00011628 38077000.0 7026.700000000001 6604.9 6755.8 8059.299999999999 6734.2 11582.099999999999 8207.0 7932.6 12175.7 10369.099999999999 12107.4 True False 7740.045411216863 7161.518102898568 7214.289213925635 8557.104657001695 6261.2130237288 11487.77921763301 8519.321876042724 7774.378069995691 11663.997671137295 9714.393256398325 10618.266555132164 0.7289368157249584 0.6744526581353494 0.6794225005058596 0.8058852744533673 0.5896643290333059 1.0818883814967502 0.8023269929991587 0.7321701738819199 1.0984841650542003 0.9148756255043374 1.0 13.374260643202314 -7.910953725159972 0.6529222720748462 1.0458831968570874 0.691911800970763 0.35919689011694267 0.13161408924542436 0.38417516846089855 0.33513055026929806 0.029372702989392714 0.05147590899521392 1.2275700239328639e-08 7.910953725159972 -0.3539713958863244 SGS(ph)SQELDVKPSASPQER ddPTM_A549_PD325901_60min_R1 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.098)GS(0.451)S(0.451)QELDVKPSASPQER 198.54 3.741e-49 70330000.0 17838.0 19270.0 18301.0 19110.0 23222.0 18459.0 18296.0 20051.0 18423.0 20734.0 24224.0 True False 19648.900628358446 20893.950528070876 19543.015912853112 20290.381298041073 21590.966831550904 18308.676024061944 18992.264291955344 19651.06707529479 17648.74537770826 19424.851701513413 21244.601568587954 0.9248891095896619 0.9834945814641426 0.9199050332743924 0.9550841060743742 1.0163036836367447 0.8618036899846105 0.8939807240271856 0.924991085940188 0.830740238678023 0.9143429514929005 1.0 14.374808666462007 -7.266432206564816 24.977010774359357 0.9128046389540037 0.958750736027272 0.24967717833910252 0.04674646750664326 774.0852421135837 3872427.8121922873 0.009790624007627289 0.01594661610016623 5.414617635503342e-08 7.266432206564816 0.045946097073268355 SGS(ph)VMER ddPTM_A549_MK2206_60min_R1 2 SGSVMER 7 0 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 S(0.036)GS(0.964)VMER;S(0.012)GS(0.988)VMER 60.43600000000001 0.010216 36110000.0 3308.8 2651.1 3010.9 2079.62 3613.8999999999996 2885.5 2411.8999999999996 2470.1 3629.8 4453.200000000001 4809.3 True False 3867.2445476067983 2786.02966623636 3437.890894563988 2589.1269933576887 3082.300097304382 3190.841694760117 2850.111009860716 2820.2442393639917 2807.6560955995137 3447.219027118282 3615.0180800724283 1.0697718412322066 0.7706820836095349 0.9510024067417965 0.7162141200980701 0.8526375329338952 0.8826627209278542 0.7884085077116995 0.7801466484802441 0.7766644684508082 0.9535827901168383 1.0 11.819787147319975 -10.894168825154908 1.1588189263273871 0.9995105218930157 0.8337500390884548 0.2181957211116642 0.09526901708065667 0.4607093526816176 1.1039271158785577 0.06051003503114541 0.014659760257949997 1.2759427097152467e-11 10.894168825154908 -0.1657604828045609 SGS(ph)VMER ddPTM_A549_PD325901_60min_R1 2 SGSVMER 7 0 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 S(0.464)GS(0.536)VMER;S(0.157)GS(0.843)VMER 56.729 0.013094 46916000.0 3807.0 3515.2999999999997 3494.5 3952.7 4019.0 3939.7000000000003 3855.4 3530.1 4150.3 4484.3 4306.3 True False 4193.483837434725 3811.5466679464243 3731.657784135577 4196.849301766977 3736.71930479731 3907.6163894033743 4002.1193567558294 3459.689386190124 3975.877324057025 4201.1605327045745 3776.6523998848347 1.1103706122285972 1.0092394704004672 0.9880861114592834 1.1112617358947188 0.9894263249938643 1.0346772685573429 1.0597002141043932 0.916073024431802 1.0527517237695123 1.1124032841446263 1.0 11.882892290034134 SGS(ph)VSNYR ddPTM_A549_PD325901_60min_R1 1 SGSVSNYR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.01)GS(0.622)VS(0.367)NYR 123.79 0.0011312999999999998 232590000.0 4318.8 3506.4 3814.1 4000.4 4581.6 3951.8 3840.9 4269.7 4708.4 4883.9 5255.3 True False 4757.24139666748 3801.89663371187 4072.9477620465036 4247.495622432415 4259.804221661946 3919.6178510151162 3987.0675513211245 4184.537483985145 4510.522321902056 4575.529720508411 4608.931416091488 1.0321788213333327 0.8248976368878129 0.8837076090623377 0.9215792640356576 0.9242498612128162 0.8504396132540131 0.8650741769341139 0.9079192346788614 0.9786481756170532 0.9927528330175494 1.0 12.170216584252275 -8.77127850001128 3.4624958854048846 0.9909397974070774 0.895836813159542 0.3805254987628046 0.050762639717993774 0.15634344331148073 3.85008567751826 0.008386843805213777 0.009107979777778734 1.6932516207938828e-09 8.77127850001128 -0.09510298424753538 SGS(ph)VYEPLK ddPTM_A549_PD325901_60min_R1 2 SGSVYEPLK 9 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L3F2;H3BV13;H3BQ89 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 S(0.042)GS(0.958)VYEPLK;S(0.234)GS(0.765)VY(0.001)EPLK 125.74 7.0235e-05 30725000.0 12451.9 13844.2 11162.8 11701.9 16849.8 15175.8 14334.0 14210.7 16267.1 14672.8 15073.900000000001 True False 13716.0077213957 15010.89932022413 11920.374735369463 12424.699786056868 15666.32817665432 15052.213316320447 14879.488213865776 13927.256440421519 15583.450357364065 13746.356903924285 13219.905861325038 1.0375268829653328 1.1354770206146976 0.9016989122625021 0.939847826178963 1.185055955843552 1.138602156037725 1.1255366240841291 1.0535064762575839 1.1787867872004747 1.0398226014709668 1.0 13.690424283030222 -6.752838953279392 24.999953276865398 1.0969982912286784 1.0057734342111961 0.2781470330037289 0.07661421668140947 252.24998502945343 733241.3328486228 0.01275831018636695 0.026237920451223258 1.766692830942366e-07 6.752838953279392 -0.09122485701748229 SGS(ph)YSGR ddPTM_A549_PD325901_60min_R1 1 SGSYSGR 7 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2;REV__Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.073)GS(0.921)YS(0.006)GR 69.812 0.021736000000000002 3501800.0 1083.2 970.95 1088.5 957.32 1302.9 983.72 729.68 862.64 803.2 1198.3 1318.3 True False 1193.1656665903063 1052.7753640493213 1162.3721556822368 1016.4514821685327 1211.3887987609887 975.7089104713264 757.4483716962164 845.4339684720111 769.4442972032394 1122.639133496842 1156.157457392235 1.0320096617994792 0.9105813030207004 1.0053753044191915 0.8791635392476597 1.0477714700671745 0.8439239000127903 0.6551429192046861 0.731244661413961 0.6655186041343846 0.9710088589741097 1.0 10.175122176903388 -7.416118837777336 6.619628811237254 0.8125402161931581 0.9670571089940987 0.3509488931026058 0.11137776116037407 0.30228258433678196 16.37315618512069 0.02115675333097309 0.03388047413644943 3.8360226447142333e-08 7.416118837777336 0.1545168928009406 SGS(ph)YSYLEER ddPTM_A549_MK2206_60min_R1 2 SGSYSYLEER 10 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;H0YIM2;H0YIS3;A0A0U1RQZ1 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.002)GS(0.982)YS(0.016)YLEER;S(0.003)GS(0.941)YS(0.056)YLEER 131.43 1.1105e-06 54212000.0 3695.1 4386.1 3290.8999999999996 3898.3 5608.5 4906.4 4138.8 4451.9 6558.5 6270.0 6671.9 True False 4318.742543478565 4609.3337554521895 3757.5991048924334 4853.383675001337 4783.497079535027 5425.591991395266 4890.766386505051 5082.970458371951 5073.010221772388 4853.6026452958795 5015.083094927589 0.8611507450089262 0.9190941940950517 0.7492595902733867 0.9677573797152434 0.9538220980571998 1.0818548543857387 0.9752114359683739 1.013536637810254 1.0115505816650154 0.9678010420614893 1.0 12.292057889716252 -6.451829240054517 5.913415190566859 1.0052955956038394 0.8503921766323618 0.6649150527998952 0.04871442228151846 0.08931817652733039 5.68353758760299 0.006051745962695725 0.01413496291649881 3.533220649412618e-07 6.451829240054517 -0.15490341897147764 SGS(ph)YSYLEER ddPTM_A549_PD325901_60min_R1 1 SGSYSYLEER 10 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;H0YIM2;H0YIS3;A0A0U1RQZ1 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.066)GS(0.51)YS(0.424)YLEER 156.14 1.5165e-08 40015000.0 4833.1 4933.4 5108.4 4963.2 5933.5 5000.3 4582.8 4826.3 5560.5 5440.4 5531.9 True False 5323.752754059829 5349.154931768807 5455.086743304671 5269.7655917549655 5516.751429463757 4959.579214644183 4757.200961804383 4730.035660340894 5326.811522159623 5096.892215535529 4851.511369603352 1.0973390245801045 1.1025749553599709 1.124409761766809 1.0862111186159724 1.13712016919684 1.0222750884843677 0.9805606128453369 0.9749612646435186 1.097969501944119 1.0505782275332973 1.0 12.244218538304994 -7.269230575562492 24.868632755539227 1.0344242451298429 1.108675607112979 0.5950520334667779 0.03541412940362895 456.26150355701566 1456333.4426085986 0.0068780724568620185 0.011115407293889977 5.379840802516919e-08 7.269230575562492 0.0742513619831362 SGS(ph)YTR ddPTM_A549_PD325901_60min_R1 1 SGSYTR 6 0 O60237;O60237-6 O60237 PPP1R12B Protein phosphatase 1 regulatory subunit 12B 1 S(0.013)GS(0.758)Y(0.004)T(0.225)R 66.07300000000001 0.056491 10911000.0 1296.2 1757.0 1509.6 1342.5 1392.1 1258.0 1356.8 1500.9 1495.9 1669.3 1820.8 True False 1427.7892697879927 1905.0685561920357 1612.050533962245 1425.4231759612826 1294.3236984842833 1247.75526508857 1408.4337664694485 1470.9633720667273 1433.0325251323775 1563.9001131154798 1596.8531430021853 0.8941268494507004 1.1930142508974781 1.0095170874207553 0.8926451265777618 0.8105464827221823 0.7813838552133296 0.8820058204109512 0.921163839337926 0.8974103419668169 0.9793637692789008 1.0 10.641015923895495 -6.100048324641903 5.021517556857769 0.9183971752256931 1.056240740520838 0.29333582831765836 0.08969408098491428 0.221917080602693 8.702471647718095 0.013271086034187949 0.036675169574948284 7.942398534678762e-07 6.100048324641903 0.13784356529514497 SGSAS(ph)PAPGDTLPWNLPK ddPTM_A549_MK2206_60min_R1 1 SGSASPAPGDTLPWNLPK 18 0 Q5T0V7;Q03001-11;F6QMI7;E7ETB9 Q5T0V7;F6QMI7 DST Dystonin 1 S(0.261)GS(0.261)AS(0.444)PAPGDT(0.034)LPWNLPK 48.177 0.021003 867890.0 427.56 388.16 288.4 182.55 808.06 653.26 536.19 726.58 935.98 553.86 640.3 True False 499.7216751616186 407.91568603459143 329.29945663829915 227.27475819498096 689.1954444306094 722.3875396011075 633.6087824442211 829.5749400579277 723.9820244529271 428.74264132752387 481.2958386190043 1.0382838060588349 0.8475362828921094 0.6841934424015951 0.4722142598346722 1.4319580373022491 1.5009220559102991 1.3164642857961386 1.723627909267303 1.5042349556361616 0.8908089514293894 1.0 8.910780139298828 -6.772754182733906 24.999901663955274 1.3180031077940368 0.7613152027836773 0.5463858456339301 0.252794434946439 139.78688699226768 308857.4811249004 0.039785197903697306 0.07566228747889485 1.6875079102045043e-07 6.772754182733906 -0.5566879050103596 SGSAT(ph)PPAR ddPTM_A549_MK2206_60min_R1 2 SGSATPPAR 9 0 H3BN50;Q15599-3 H3BN50 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 SGSAT(0.999)PPAR;S(0.003)GS(0.007)AT(0.99)PPAR 117.28 1.0833e-05 86628000.0 2300.3 2382.0 2274.3 2030.8 2903.2 2088.1 1896.4 2223.1 3349.9 3195.4 3575.6 True False 2688.5344030645324 2503.2336256553895 2596.8299383927992 2528.346091166077 2476.1431258457837 2309.0613560313977 2240.951332600797 2538.2312329582155 2591.152998691061 2473.5569206983173 2687.67983846027 1.0003179562506046 0.931373443307687 0.9661976479611064 0.9407169912821637 0.921293931819025 0.8591281308841544 0.8337865621243798 0.9443949374611259 0.9640854396465214 0.9203316873171098 1.0 11.39214557643371 -8.940506120849241 2.004605569586107 0.9864572854452057 0.92128177482434 0.060228475210499344 0.04789239031651789 0.3025527688766335 2.414567300738138 0.009147226305481043 0.00929443995421061 1.1468163583354606e-09 8.940506120849241 -0.06517551062086568 SGSAT(ph)PPAR ddPTM_A549_PD325901_60min_R1 2 SGSATPPAR 9 0 H3BN50;Q15599-3 H3BN50 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 S(0.081)GS(0.016)AT(0.903)PPAR;S(0.004)GS(0.013)AT(0.983)PPAR 89.82700000000001 0.0011436 199375000.0 7917.0 7694.8 7508.0 6728.9 8985.8 7833.0 7751.7 8988.5 9146.9 8479.7 8764.9 True False 8720.728011812644 8343.267800902948 8017.538029271685 7144.528870559313 8354.668407327117 7769.210645022877 8046.695185393 8809.217316158165 8762.487602201581 7944.290294845345 7686.87286527892 1.1344961943111584 1.0853916731976823 1.0430168639169717 0.9294454319428987 1.0868747999026476 1.010711479321568 1.0468099741494845 1.1460079372391858 1.1399287793325086 1.0334879259847216 1.0 12.90818109230263 -8.044817263531286 24.9678159149268 1.074989514406691 1.0446690489057606 0.05324887183929805 0.06219283456031907 1356.5304822093508 755724.2788409638 0.011760210961231551 0.015182834623401219 9.019505681497811e-09 8.044817263531286 -0.03032046550093037 SGSDAGEARPPTPAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 SGSDAGEARPPT(0.006)PAS(0.994)PR;SGSDAGEARPPT(0.197)PAS(0.803)PR 88.036 2.0797e-06 37718000.0 2549.2 2152.2 2005.25 1784.63 3134.0 2524.3 2307.7 2258.6000000000004 3334.8 3587.7 3292.8999999999996 True False 2979.4426380437767 2261.7377872105517 2289.624602718271 2221.864430115084 2672.9927515846957 2791.4197505052725 2726.979218647362 2578.7634666724075 2579.4731245813164 2777.236078234136 2475.1820505833484 1.2037266662230297 0.9137662365794498 0.9250328080630088 0.8976569741976906 1.0799176371510644 1.1277634103105239 1.1017287467823509 1.0418479990450187 1.0421347084241293 1.1220330551361262 1.0 11.273318924526976 -5.237697786507571 23.525013242819686 1.0186799052087863 1.2037271448486049 0.2924420878416981 0.079250635730014 2798.577670849366 2772953.880832719 0.010518676216013448 0.7923531173536055 5.7849846842234714e-06 5.237697786507571 0.18504723963981862 SGSDAGEARPPTPAS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 SGSDAGEARPPT(0.156)PAS(0.843)PR 55.126999999999995 0.0032225 23193000.0 1876.6 1979.7 2042.4 1676.3 2123.9 2196.0 1902.7 1980.1 2310.8 1792.2 2040.9 True False 2067.111050520097 2146.536266757754 2181.0095459489194 1779.8412438464798 1974.7245910572306 2178.11650408148 1975.1082896973908 1940.6053521416 2213.6851120234633 1679.040186141234 1789.8822383310408 1.1548866211709858 1.199261169695316 1.218521251980567 0.9943901368092665 1.1032706782422426 1.2169049211374066 1.1034850491276245 1.0842083968334697 1.2367769591856466 0.9380729917219803 1.0 10.805648956082003 -11.039585514496377 1.3344964489487292 0.9999373349534896 1.1536353729349778 0.4531087253725401 0.07221531295439299 0.3800096717556441 1.205477115923491 0.05241021971001898 0.01171535281982863 9.128816671740514e-12 11.039585514496377 0.15369803798148818 SGSDRNS(ph)AILSDPSVFSPLNK ddPTM_A549_PD325901_60min_R1 2 SGSDRNSAILSDPSVFSPLNK 21 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ISN4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.296)GS(0.296)DRNS(0.371)AILS(0.037)DPS(0.001)VFSPLNK;S(0.266)GS(0.299)DRNS(0.432)AILS(0.003)DPSVFSPLNK 80.83 4.0236e-05 5643800.0 2558.2 2758.4 2510.04 2539.3 3154.1 3370.2 2838.4 3654.7 3929.1 3262.2 3552.8 True False 2817.9065807526963 2990.860048605641 2680.3864084966835 2696.1467938312767 2932.56689705429 3342.7542085862474 2946.4168652320777 3581.804141443315 3763.9735908133052 3056.224135269466 3115.8281230547923 0.9043844748374598 0.9598925006406864 0.8602484805448136 0.8653066495811536 0.9411837820435259 1.0728301037699648 0.9456288180438458 1.149551258922355 1.208017079941837 0.980870579046289 1.0 11.605399937556026 -7.472003885973441 1.2693838708350076 1.1000538334056564 0.8986745885762892 0.4742092398359883 0.07729868824445475 0.27622284381781403 0.8860734014996458 0.014976271589542843 0.02784830955589418 3.3728429069821254e-08 7.472003885973441 -0.2013792448293672 SGSESS(ph)VDQK ddPTM_A549_PD325901_60min_R1 1 SGSESSVDQK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.003)GS(0.098)ES(0.283)S(0.616)VDQK 136.06 1.7508e-16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGSETPDGPLS(ph)PGKMEDISPVQTDALDSVR ddPTM_A549_PD325901_60min_R1 1 SGSETPDGPLSPGKMEDISPVQTDALDSVR 30 1 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 S(0.001)GS(0.001)ET(0.002)PDGPLS(0.983)PGKMEDIS(0.008)PVQT(0.005)DALDSVR 44.641000000000005 0.0072959999999999995 6151700.0 2286.1 2223.5 1969.2 2419.2 2064.3 2312.4 2121.5 2724.3 2403.8 2844.8 2970.3 True False 2518.18318906213 2410.8821483739293 2102.841753761561 2568.6284895981653 1919.310689448392 2293.5685810737778 2202.2348434293435 2669.961699327996 2302.776645439675 2665.1788425033947 2604.9719302830563 0.9666834255632476 0.9254925630281026 0.8072416171997163 0.9860484328977235 0.7367874744200563 0.8804580788033899 0.8453967652503835 1.0249483567517281 0.8839928824835572 1.023112307476494 1.0 11.347052111576767 -11.134600926796713 0.4274568754745641 1.047467990667542 0.8857755450617295 0.25237742120640283 0.0778539887438941 3.3086408445439703 0.611618734189212 0.24540290352783836 0.020332461681061228 7.334982350938904e-12 11.134600926796713 -0.16169244560581242 SGSFDS(ph)RDR ddPTM_A549_PD325901_60min_R1 1 SGSFDSRDR 9 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.187)GS(0.147)FDS(0.666)RDR 45.137 0.04165 5150200.0 777.0 652.62 1025.5 592.42 1009.3 1185.8 1208.1 1558.5 1080.5 1269.4 1326.8 True False 855.8804680028325 707.6185777700892 1095.0965968324608 629.0124379165611 938.4102498959749 1176.1432379507369 1254.0749065976863 1527.414494880402 1035.0903425399656 1189.2498673628402 1163.6120112781737 0.7355376703809439 0.6081224419407661 0.9411183334465137 0.5405688767561107 0.8064631860109237 1.0107692482984927 1.0777431776594875 1.3126493024101806 0.8895493794387418 1.0220329936750177 1.0 10.184394378376934 -7.124156089039879 4.118714035081533 0.9914864328698939 0.7120186593238949 0.5578725571601968 0.1404573804384653 0.16723745691703729 4.814756556772987 0.02154952321854578 0.038395436559817885 7.513528030537019e-08 7.124156089039879 -0.27946777354599905 SGSGEDES(ph)SEDEAR ddPTM_A549_MK2206_60min_R1 1 SGSGEDESSEDEAR 14 0 Q8N7H5 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog 1 S(0.005)GS(0.005)GEDES(0.495)S(0.495)EDEAR 49.626999999999995 0.027363 1309600.0 202.94 261.02 302.64 242.61 165.38 0.0 0.0 0.0 0.0 331.39 555.49 True False 237.19131059336425 274.30480309343835 345.5589027635745 302.04946089117703 141.05282107756122 0.0 0.0 0.0 0.0 256.5287688396494 417.546502255928 0.5680596276387484 0.6569443202407859 0.8275938150519343 0.7233911893867117 0.33781344189324647 0.0 0.0 0.0 0.0 0.614371734534168 1.0 8.705793069608225 -10.977927456525139 1.2867223300384725 0.9950546725897279 0.31481896122286174 0.2031214389660998 0.32092674536410204 0.4193098170371371 1.2494001179069176 0.24433566828871625 0.05803720175894414 1.0521376056062606e-11 10.977927456525139 -0.6802357113668662 SGSGEDES(ph)SEDEAR ddPTM_A549_PD325901_60min_R1 2 SGSGEDESSEDEAR 14 0 Q8N7H5 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog 1 SGSGEDES(0.5)S(0.5)EDEAR;S(0.003)GS(0.003)GEDES(0.497)S(0.497)EDEAR 60.563 0.006952 8226500.0 108.02 366.88 558.84 298.44 373.68 0.0 251.9 432.25 295.27 390.97 342.24 True False 118.9861108798789 397.79826516547223 596.7662429779156 316.873960993583 347.43400592601614 0.0 261.48619234496897 423.6284346564348 282.8608287290842 366.28408747664247 300.14664963810844 0.3964265835495493 1.3253463453451968 1.9882488899924289 1.0557304616781262 1.1575475066768954 0.0 0.871194773155879 1.4114048421570267 0.9424087494234367 1.2203504117679707 1.0 8.229523753866594 -6.765027669865204 3.3856245197743555 0.9307774627382506 1.269953082594322 0.06081664154390665 0.48013871397992697 0.4533229740445794 10.8946015730934 0.06739605962628802 0.14094000011124025 1.717798938888589e-07 6.765027669865204 0.33917561985607136 SGSGS(ph)ESEPSSR ddPTM_A549_PD325901_60min_R1 1 SGSGSESEPSSR 12 0 O14641;I3L2N2;I3L0Z8 O14641 DVL2 Segment polarity protein dishevelled homolog DVL-2 1 S(0.002)GS(0.434)GS(0.565)ESEPSSR 194.29 1.2652e-21 22773000.0 1562.4 1652.5 1784.2 1209.8 1741.3 1627.3 1634.3 1683.0 1435.7 1690.1 1740.0 True False 1721.0136978219107 1791.7619744492547 1905.2865412661884 1284.5265983448494 1618.9970951588853 1614.047808329595 1696.4941808232757 1649.431244712042 1375.3625217812385 1583.3867975657295 1525.9910307687837 1.1278006640411746 1.174162847829176 1.2485568413244985 0.8417654969424779 1.060947975784134 1.0577046494935485 1.1117327340833671 1.080891834522166 0.9012913536512337 1.0376121259166446 1.0 10.575530767212365 -5.758608880033743 0.3535679240664021 0.9594165770722927 1.290777888902624 0.16093228439069118 0.10079502218051033 4.086694353082393 0.44359059586443805 0.03237696915710822 0.543291511215216 1.7433762285894285e-06 5.758608880033743 0.33136131183033135 SGSGS(ph)VGNGSSR ddPTM_A549_PD325901_60min_R1 1 SGSGSVGNGSSR 12 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.021)GS(0.076)GS(0.904)VGNGSSR 59.225 0.01045 27708000.0 590.22 711.82 471.5 525.65 634.06 560.93 349.81 503.79 550.83 558.08 828.03 True False 650.1386999030007 771.807569532507 503.49882535982937 558.1182066622332 589.5258129882517 556.3619720557488 363.122210973377 493.7415132343909 527.6805306629233 522.8427335574713 726.1875593146416 0.8952765598416282 1.0628212500100118 0.6933454297055426 0.7685593060682171 0.8118092983369641 0.7661408749288268 0.5000391514777298 0.6799090770714556 0.7266449609257084 0.7199830496282775 1.0 9.504198404588127 -4.331265695349048 19.952972139022858 0.8219990665685026 0.7943549975736541 0.0 0.1540449190116869 0.0 0.0 0.022826442177308653 0.0 4.663739718820119e-05 4.331265695349048 -0.027644068994848503 SGSLDDS(ph)FSDFQELPASSK ddPTM_A549_MK2206_60min_R1 2 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 SGSLDDS(1)FSDFQELPASSK;SGSLDDS(0.895)FS(0.104)DFQELPASSK 234.48 1.8381999999999998e-76 17807900.0 2373.7 2889.5 1958.48 2225.9300000000003 4305.9 3212.6 2804.81 3301.9 4388.4 4849.1 4737.799999999999 True False 2774.3225286068223 3036.5632079476304 2236.221913443052 2771.282949925797 3672.5078139912375 3552.555199648713 3314.4076709512956 3769.954436644656 3394.4344068347864 3753.6849421537904 3561.2735033720414 0.7790254036877303 0.8526621740993547 0.6279275970592133 0.7781718947735323 1.0312344195170273 0.9975519140231511 0.9306804624281181 1.0585972779330266 0.9531518440301535 1.0540288294621465 1.0 11.798177522611395 -6.718649159911673 7.205758590571976 0.9845472019931624 0.7552608464568088 0.77447129618035 0.06285713588602262 0.07149111094854585 9.478436216165198 0.008094037376120088 0.016800198612562708 1.9113967361702905e-07 6.718649159911673 -0.22928635553635357 SGSLDDS(ph)FSDFQELPASSK ddPTM_A549_PD325901_60min_R1 2 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 SGSLDDS(0.987)FS(0.013)DFQELPASSK;SGSLDDS(0.986)FS(0.014)DFQELPASSK 158.64 1.4870999999999999e-26 30000000.0 3022.3999999999996 2660.3 2555.4 3284.3999999999996 3400.6 3465.5 3190.2 3356.9 2948.1000000000004 3619.6 3445.8 True False 3329.231823026718 2884.492817323661 2728.824810868523 3487.269928586396 3161.7535874331247 3437.2781169828627 3311.604806744423 3289.943996062894 2824.2016092939116 3391.057838275201 3021.9884447259037 1.1016692763458535 0.9545016038554992 0.9029898230190053 1.1539653418174118 1.0462493968006876 1.1374226539422212 1.0958363565300753 1.0886686220804838 0.9345507638266527 1.1221279962845034 1.0 11.561282428696098 -8.759988594679879 24.99999288796289 0.9690934150370495 1.0578291486450158 0.0 0.08541277731368332 43.207634205336745 744556.0447314424 0.012959678613137002 0.014313088092952784 1.7378464669875833e-09 8.759988594679879 0.08873573360796627 SGSLDSELSVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SGSLDSELSVSPK 13 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 SGSLDSELS(0.004)VS(0.996)PK;SGSLDSELS(0.01)VS(0.99)PK 165.64 3.6948999999999996e-19 145768000.0 13193.900000000001 14221.1 12820.7 11576.2 19350.3 15513.900000000001 14461.2 16180.8 20850.9 17637.7 19586.1 True False 15420.707760115256 14944.893246770722 14638.868043421082 14412.36951967536 16503.896503187418 17155.570600706626 17088.612851195237 18474.477951621746 16128.204442045286 13653.331320085357 14722.330821139587 1.0474365742395138 1.0151173362652306 0.9943308720111993 0.9789461801103424 1.1210111159497724 1.16527544511316 1.1607274051101977 1.2548609439678196 1.0954925981480477 0.9273892487513412 1.0 13.845718474714676 -6.7582974458144545 24.995363881339845 1.0847183712214405 1.008352933466061 0.20808960292602874 0.08378158145626871 127.83052949119894 1016925.8250060274 0.012696823443768409 0.02557814050518638 1.7446268586538975e-07 6.7582974458144545 -0.07636543775537952 SGSLDSELSVS(ph)PK ddPTM_A549_PD325901_60min_R1 4 SGSLDSELSVSPK 13 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 SGSLDSELS(0.001)VS(0.999)PK;SGSLDSELS(0.19)VS(0.81)PK;SGSLDSELS(0.004)VS(0.996)PK;SGSLDS(0.009)ELS(0.442)VS(0.548)PK 159.18 1.6905e-18 264663000.0 19758.999999999996 21252.4 20253.7 22121.7 25057.7 22194.8 21254.7 22330.5 22434.3 23332.100000000002 24079.300000000003 True False 21764.919134193 23043.414333304278 21628.23787739211 23488.10716697408 23297.733596372113 22014.05290746248 22063.559239518134 21885.100659561635 21491.46438837975 21858.907224118917 21117.698751259082 1.0306482439472877 1.091189651141812 1.0241758882985574 1.112247477513319 1.1032325951227546 1.0424456360875947 1.044789941337839 1.0363392771789017 1.0176991651184712 1.0350989225478766 1.0 14.366165008704424 -8.357108222189177 0.9375222251407094 1.0059105394272336 1.0710073518645518 0.3641064746496525 0.027904072423002975 0.28916573479375784 0.4997474623936112 0.005378973083883068 0.0068352654667912125 4.394320993570128e-09 8.357108222189177 0.06509681243731813 SGSLDSELSVS(ph)PKR ddPTM_A549_MK2206_60min_R1 2 SGSLDSELSVSPKR 14 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 SGSLDSELS(0.095)VS(0.905)PKR;SGSLDSELS(0.061)VS(0.939)PKR 116.35 1.5312e-06 289910000.0 4528.4 4517.4 3990.3999999999996 4148.200000000001 6409.5 4336.7 4963.1 4482.4 6654.700000000001 6888.4 7343.700000000001 True False 5292.683211249583 4747.316364624544 4556.298723195105 5164.509186219774 5466.671040613311 4795.606715531518 5864.831026593024 5117.793926774282 5147.421075372222 5332.3056557984255 5520.056614190817 0.9588095885906844 0.8600122600953526 0.8254079698171739 0.935589894665752 0.9903287996285647 0.8687604223484046 1.062458492095148 0.9271270721422661 0.9324942541602502 0.9659874940576287 1.0 12.43046734814986 -6.48981094440323 8.445350944314983 0.9651134661236582 0.8793087608402241 0.30367348831550156 0.05453898593573784 0.2770274215564083 65.20721489440453 0.007448366284953407 0.017067577846430322 3.23734553284815e-07 6.48981094440323 -0.08580470528343409 SGSLDSELSVS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 SGSLDSELSVSPKR 14 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 SGSLDSELS(0.005)VS(0.995)PKR;SGSLDSELSVS(1)PKR 149.09 1.0467000000000001e-13 475470000.0 6958.099999999999 7319.0 8403.3 7778.200000000001 8619.2 8932.8 8193.9 9007.900000000001 8601.0 9152.6 9333.9 True False 7664.481189717507 7935.797816032737 8973.598471147943 8258.64174842611 8013.817126625776 8860.054238460401 8505.72334837412 8828.230367939157 8239.529880783195 8574.70327400751 8185.8894724670945 0.9363040162583036 0.9694484445122877 1.0962276611882282 1.008887522388827 0.9789793954071727 1.0823569348524473 1.0390713650584673 1.0784692851806208 1.0065527892230304 1.047498051720363 1.0 12.998923472014779 -5.535116956888235 24.99937947674104 1.0197317337406078 0.9445900862747842 0.35796492254615686 0.039055516760885776 161.64536453923859 330198.7480251492 0.005408739243166328 0.02097676201966968 2.9166414473899137e-06 5.535116956888235 -0.07514164746582352 SGSLGQPS(ph)PSAQR ddPTM_A549_MK2206_60min_R1 1 SGSLGQPSPSAQR 13 0 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 SGSLGQPS(0.851)PS(0.149)AQR 111.74 4.0385e-05 5853600.0 1049.3 1191.8 1370.3 844.73 1107.1 879.8 1096.1 893.17 1432.9 1688.2 1679.5 True False 1226.3961870780386 1252.4575294106198 1564.6291450466747 1051.6888879213702 944.2470565665018 972.899852036025 1295.2471818517888 1019.7795827184059 1108.3504378711077 1306.8344474941798 1262.4337981580775 0.9714538606835316 0.9920975905730556 1.2393752031429353 0.8330645848168915 0.7479576813803479 0.7706541550578813 1.025992161918975 0.8077885622250369 0.8779473739440585 1.0351706754056205 1.0 10.301992019795243 -6.290988363553027 24.984887978805133 0.905568156330327 1.0600878738522375 0.32191711307535786 0.11420163730898648 683.7393371512253 578128.5646615878 0.016351870544008388 0.03800295937202571 5.116955456806908e-07 6.290988363553027 0.15451971752191052 SGSLGQPSPS(ph)AQR ddPTM_A549_MK2206_60min_R1 1 SGSLGQPSPSAQR 13 0 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 SGSLGQPS(0.268)PS(0.732)AQR 103.85 0.00011877 5786600.0 1342.4 1545.4 1276.4 1038.6 1709.3 1000.0 1507.3 1359.7 1884.8 2023.6 1733.9 True False 1568.9643014710362 1624.0542590629063 1457.412713082958 1293.0570466245256 1457.8642342960181 1105.8193362537231 1781.1568991927752 1552.4416389066103 1457.8958094071209 1566.4673545487626 1303.3247767944583 1.2038168301610295 1.2460856173219432 1.1182268142461624 0.9921218944404737 1.1185732522339147 0.8484603039416606 1.3666255187548497 1.1911395122287614 1.1185974788209212 1.2019010015304907 1.0 10.347980919977351 -10.313310660526064 0.9147940049018293 1.0066231211742476 1.130420617763015 0.0 0.13969632253330644 0.8780064039254063 1.422072801877665 0.06244152939911561 0.023972279603619983 4.8605939218636007e-11 10.313310660526064 0.12379749658876738 SGSLS(ph)GR ddPTM_A549_MK2206_60min_R1 1 SGSLSGR 7 0 Q16512;Q16512-2;Q16512-3 Q16512 PKN1 Serine/threonine-protein kinase N1 1 S(0.01)GS(0.24)LS(0.75)GR 71.491 0.020474000000000003 33249000.0 957.74 1509.7 873.1 804.65 2016.4 1413.7 1201.8 1846.8 2003.6 2036.1 2298.3 True False 1119.3830975051176 1586.537281549934 996.9187087063073 1001.7892861221112 1719.7902311089292 1563.296795661889 1420.1515036488277 2108.589555587797 1549.7877990917375 1576.143595867135 1727.5686801468958 0.6479528775723904 0.9183642304831726 0.5770645880322043 0.5798839129434372 0.9954974588695917 0.904911517340637 0.822052124450457 1.220553243306369 0.8970918591554684 0.9123478643599368 1.0 10.754527351303254 -6.7713729643376555 24.99824140821406 0.9600810412856642 0.6903732560400881 0.5348769190140839 0.12715829824308078 121.12638840820263 304819.5702580259 0.017789323073664324 0.033902972142710514 1.6928833580460665e-07 6.7713729643376555 -0.26970778524557604 SGSMEEDVDTS(ph)PGGDYYTSPSS(ph)PTSSSR ddPTM_A549_PD325901_60min_R1 1 SGSMEEDVDTSPGGDYYTSPSSPTSSSR 28 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 2 SGSMEEDVDT(0.453)S(0.509)PGGDY(0.034)Y(0.004)TS(0.001)PS(0.208)S(0.615)PT(0.12)S(0.034)S(0.01)S(0.011)R 79.069 1.3116e-06 2114200.0 533.31 400.7 203.77 437.81 308.19 410.45 252.78 483.62 365.3 207.22 540.12 True False 587.4512385979284 434.46839525677217 217.59905756855247 464.8525293613478 286.54379759778135 407.1074312842635 262.3996812265236 473.9738197074496 349.9477113649691 194.1360938356136 473.6886641027793 1.2401631770323838 0.917202433120719 0.4593714691921329 0.9813461131518355 0.6049201074729711 0.8594409411408899 0.5539496743573941 1.000601989505513 0.7387715558441962 0.4098390114598365 1.0 8.887795336808258 -10.90809628905816 1.0300089933575263 1.0060546742117227 0.8015963647905011 0.0 0.2764816922369489 1.0465501085358118 1.8714450892908774 0.1632531782856155 0.034313208747934774 1.235673437279799e-11 10.90809628905816 -0.20445830942122156 SGSPSDNS(ph)GAEEMEVSLAKPK ddPTM_A549_MK2206_60min_R1 4 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.009)GS(0.008)PS(0.055)DNS(0.927)GAEEMEVSLAKPK;S(0.001)GS(0.001)PS(0.031)DNS(0.967)GAEEMEVSLAKPK;S(0.053)GS(0.325)PS(0.074)DNS(0.547)GAEEMEVSLAKPK;S(0.004)GS(0.018)PS(0.004)DNS(0.974)GAEEMEVSLAKPK 128.07 5.1298e-18 52191000.0 8091.9 7839.9 8628.4 7869.1 11254.800000000001 7584.9 7151.299999999999 7812.7 11840.800000000001 11860.600000000002 11310.5 True False 9457.61489203924 8238.917423079642 9852.036864278436 9797.029853257318 9599.233829143403 8387.529083550862 8450.59864207344 8920.174150390292 9158.877705872155 9181.282222455551 8501.790696080343 1.1124262205607542 0.9690802464565617 1.1588190319505995 1.1523489819355504 1.1290837627382457 0.9865602886951617 0.9939786739244824 1.0492112155269642 1.077288071805244 1.0799233421129129 1.0 13.053551026649776 -7.252047271127064 24.922057239753002 1.031742202176225 1.1025290557049614 0.30379770554887486 0.05513483661275588 695.9939358742571 1846828.053964887 0.008502086036423414 0.014584696605722793 5.596966775510814e-08 7.252047271127064 0.07078685352873637 SGSPSDNS(ph)GAEEMEVSLAKPK ddPTM_A549_PD325901_60min_R1 2 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 SGSPS(0.001)DNS(0.999)GAEEMEVSLAKPK;SGS(0.001)PS(0.015)DNS(0.983)GAEEMEVSLAKPK 108.5 1.4654e-10 97745000.0 7658.3 6811.2 7996.900000000001 8392.2 9203.099999999999 7957.8 7954.2 9138.7 8689.0 9571.4 9552.7 True False 8435.764978257514 7385.203727908476 8539.617723266216 8910.567133930941 8556.706004971411 7892.9943152001815 8256.90143370525 8956.421459328538 8323.831546811434 8967.060170534662 8377.778459554582 1.0069214671864235 0.8815229196572861 1.0193176824253525 1.0635954599358892 1.0213573975822634 0.9421345232874331 0.9855717089640303 1.0690687874557046 0.99356071385707 1.0703386600427496 1.0 13.032352019006431 -5.79905949706397 24.999803158308282 1.0044826325267768 0.9442218083384267 0.2268007532976043 0.04743824534321096 148.05155996700594 98384.92958113698 0.005631631502275398 0.017510023274524722 1.5883291372817386e-06 5.79905949706397 -0.060260824188350104 SGSS(ph)FSR ddPTM_A549_MK2206_60min_R1 2 SGSSFSR 7 0 A6PW57;Q99755-4;Q99755-3;Q99755 A6PW57 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha 1 S(0.002)GS(0.276)S(0.721)FSR;S(0.007)GS(0.273)S(0.719)FS(0.001)R 85.38 0.013630000000000001 208205000.0 10289.3 12650.9 12448.099999999999 10040.1 16229.0 11340.8 9017.3 12297.0 15311.9 16257.6 15083.5 True False 12025.88229076723 13294.776773637184 14213.427760676877 12499.92495071721 13841.735598426307 12540.875928586225 10655.626688178208 14040.137407983078 11843.779098079844 12584.996868606433 11337.850666577773 1.060684484601448 1.1726011538349261 1.2536262981991693 1.1024951129022234 1.2208429979792905 1.1061069948252877 0.9398277505620483 1.2383420650768693 1.0446229577704238 1.1099984678493828 1.0 13.468859551878476 -8.570342229434422 0.43922681272497854 0.9990045242350756 1.1675932992918763 0.08549963853004239 0.09163492148792944 0.7747513167235486 0.3702891164086456 0.03696185868478356 0.040831389140814474 2.6894146765953315e-09 8.570342229434422 0.1685887750568007 SGSS(ph)FSR ddPTM_A549_PD325901_60min_R1 1 SGSSFSR 7 0 A6PW57;Q99755-4;Q99755-3;Q99755 A6PW57 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha 1 S(0.004)GS(0.288)S(0.702)FS(0.006)R 65.47399999999999 0.024998 133980000.0 6059.3 6523.8 6679.9 7042.1 7704.6 6800.2 6927.4 7211.3 7059.6 8142.4 8371.4 True False 6674.435675379099 7073.583521278088 7133.238183501858 7477.074523230507 7163.455475427059 6744.821425799122 7191.025997818733 7067.4649643445855 6762.909562420299 7628.287474409323 7341.770870676895 0.9091043282264311 0.9634710270692387 0.9715964048935497 1.0184292938225594 0.9757122091671331 0.9186913545256506 0.9794675051137541 0.9626376372725155 0.9211550839091732 1.0390255442153307 1.0 12.841912374733381 SGSS(ph)FSRR ddPTM_A549_PD325901_60min_R1 1 SGSSFSRR 8 1 A6PW57;Q99755-4;Q99755-3;Q99755 A6PW57 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha 1 S(0.001)GS(0.136)S(0.691)FS(0.172)RR 50.353 0.013163999999999999 25304000.0 2631.3 2546.0 3070.5 2817.4 3535.1 3716.9 3287.8 3653.0 3260.2 3452.3 3985.3 True False 2898.42763893932 2760.5603551877757 3278.882594416451 2991.4243992203487 3286.8067714329363 3686.6307987342675 3412.919028153194 3580.1380492769363 3123.185131650898 3234.321188826798 3495.1333648981813 0.829275262583222 0.7898297624097086 0.9381280346399514 0.8558827623756479 0.9403952376874999 1.0547897358536602 0.9764774822126474 1.0243208700510436 0.8935811042340243 0.9253784766296089 1.0 11.771131790679497 -6.1255147136673065 1.0943131474326158 0.9629881822652486 0.8046085827327573 0.5362726028545208 0.05367390804974071 0.4440130730866051 0.8613961300493648 0.009119259998059376 0.056487792120033534 7.490059821544372e-07 6.1255147136673065 -0.15837959953249137 SGSS(ph)PEVK ddPTM_A549_MK2206_60min_R1 1 SGSSPEVK 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGS(0.283)S(0.716)PEVK 112.3 0.0014498 127680000.0 5274.4 5518.7 6365.8 6965.2 5046.1 3580.1 3720.7 3748.1 4937.4 6929.3 6913.8 True False 6164.589773300682 5799.578257726448 7268.56616181721 8671.674312679716 4303.825374528248 3958.943805721952 4396.70302847911 4279.404653074843 3819.0867834076375 5363.966317392141 5196.91264882722 1.1862023069969891 1.115966084023989 1.398631582437218 1.6686203711037244 0.8281504164784232 0.7617876368607737 0.8460221145859181 0.8234513339454665 0.7348760776784434 1.0321447905426349 1.0 12.34343909464676 -6.7887378189059255 24.999384990106886 0.8545627039208334 1.3302042292020313 0.6911931711520907 0.1546845771307606 96.68999919174777 88546.60858102835 0.023752392002780807 0.04489556055104155 1.6265303865069952e-07 6.7887378189059255 0.47564152528119785 SGSS(ph)PEVK ddPTM_A549_PD325901_60min_R1 1 SGSSPEVK 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGS(0.078)S(0.922)PEVK 157.59 0.00034637 177920000.0 15659.0 13981.0 12652.0 11799.0 14622.0 12432.0 10449.0 12823.0 16043.0 14279.0 16476.0 True False 17248.69015245348 15159.227936323776 13510.640802656557 12527.79743252677 13595.001163161554 12330.75791381647 10846.642412912192 12567.2352055511 15368.768501035316 13377.42150313062 14449.556449969237 1.1937176211723926 1.0491137211589667 0.9350211440355541 0.8670022139367082 0.940859410476264 0.8533658425094924 0.7506557346911008 0.8697315553639611 1.063615243433167 0.925801532348012 1.0 13.81873758734453 -5.383187575870016 2.840509037649179 0.9681675041265712 1.2067420655199972 0.3599532237888916 0.09277691417974454 0.35696493308213695 4.4692092286987934 0.015964406222399793 0.16833510478900368 4.1382090307708495e-06 5.383187575870016 0.23857456139342603 SGSS(ph)PEVKDKPR ddPTM_A549_MK2206_60min_R1 2 SGSSPEVKDKPR 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)GS(0.021)S(0.977)PEVKDKPR;S(0.011)GS(0.103)S(0.886)PEVKDKPR 159.52 1.3081999999999999e-14 74029000.0 7781.299999999999 9339.7 9714.900000000001 7802.2 10849.7 5533.9 5704.9 3632.2 11470.4 15547.7 15355.4 True False 9094.593205480167 9815.050836915887 11092.618901856496 9713.73935025407 9253.723502510678 6119.493624894478 6741.406484578296 4147.07547314598 8872.372714464895 12035.463771653383 11542.230392519536 0.7879407095680857 0.8503599827011749 0.961046394381936 0.8415825208747781 0.8017274987430482 0.5301829383738945 0.5840644533440754 0.35929584942557374 0.7686878889729178 1.0427329348280476 1.0 13.494634413351694 -4.245785521938927 18.805053942279148 0.8075476870922895 0.7535069987904464 0.0 0.20195345342232893 0.0 0.0 0.028884434074712872 0.0 5.678249587953954e-05 4.245785521938927 -0.054040688301843165 SGSS(ph)PGLR ddPTM_A549_MK2206_60min_R1 4 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.006)GS(0.078)S(0.916)PGLR;SGS(0.066)S(0.934)PGLR;S(0.001)GS(0.056)S(0.943)PGLR;SGS(0.059)S(0.941)PGLR 146.79 0.00080571 718026000.0 13675.400000000001 14791.6 11400.5 11576.0 15383.300000000001 12223.7 11124.8 11727.099999999999 16357.199999999999 16239.5 16893.1 True False 15983.473188570475 15544.429259968212 13017.262328033727 14412.12051966639 13120.43694813429 13517.203820564635 13146.032158256352 13389.452337737519 12652.320317080947 12570.985671177425 12698.077044158514 1.2587317853708675 1.224156162063854 1.0251365055327057 1.134984491710608 1.0332617216376139 1.064507938765653 1.0352773977146335 1.05444724356095 0.9963965624937977 0.9899912898197799 1.0 13.63232241600306 -2.00000000001042 0.34448306846368065 0.9988676977609839 4.12959436442195 0.7906221075308096 0.040215310072903354 14.178569518018126 0.17494624051908614 0.009808378442213174 29.12772035543699 0.009999999999760069 2.00000000001042 3.1307266666609666 SGSS(ph)PGLR ddPTM_A549_PD325901_60min_R1 4 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGS(0.089)S(0.91)PGLR;SGS(0.065)S(0.934)PGLR;S(0.007)GS(0.247)S(0.746)PGLR;S(0.001)GS(0.073)S(0.926)PGLR 141.02 0.0010728 992243000.0 17432.5 16869.399999999998 15896.599999999999 16492.0 19078.8 17475.699999999997 16672.899999999998 17626.699999999997 16169.599999999999 16434.6 18692.0 True False 19202.23456687177 18291.043541164447 16975.438870021342 17510.673383950463 17738.770906286863 17333.38369324986 17307.396333260956 17275.121640621353 15490.047943298672 15396.91655125362 16393.00249835063 1.171367756992887 1.1157836121238185 1.0355295725556872 1.068179754484408 1.0820940769130998 1.0573647929959045 1.0557795214758448 1.0538107123670284 0.9449182933301689 0.9392371258897063 1.0 14.000792498341074 -8.61942130530606 4.43183965147798 0.9741261555661036 1.079934962284553 0.6617968107830197 0.037802589227236824 0.1093308956677681 3.863866194935457 0.006849322102935435 0.007778984572727276 2.4020314795106406e-09 8.61942130530606 0.1058088067184495 SGSS(ph)PKWTHDK ddPTM_A549_PD325901_60min_R1 1 SGSSPKWTHDK 11 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;H0YF14;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.316)GS(0.23)S(0.454)PKWTHDK 102.9 9.3585e-05 19008000.0 3324.2 3315.2 2612.9 4305.6 3041.8 5902.6 4068.7 4009.3 6173.3 4632.3 5905.0 True False 3661.670336853302 3594.583538695411 2790.2271066441126 4571.547133272926 2828.1544616403216 5854.531182600794 4223.536604978067 3929.3313662649975 5913.857669229032 4339.815787446735 5178.722434879117 0.7070605507241814 0.694106236411822 0.5387867648305895 0.8827557743746187 0.5461104543067362 1.1304971942829085 0.8155557008678829 0.7587453113533622 1.1419530093751924 0.8380089572319463 1.0 12.338380520760794 -7.606354771966905 0.6694304865981486 1.0602894085173267 0.6537176121287167 0.2660902623471204 0.16801343539102437 0.4166544023850047 0.3742639976582979 0.03244297012170091 0.07042517983010314 2.4753990961659307e-08 7.606354771966905 -0.40657179638860996 SGSS(ph)QELDVKPSASPQER ddPTM_A549_MK2206_60min_R1 3 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.009)GS(0.079)S(0.912)QELDVKPSASPQER;S(0.245)GS(0.197)S(0.558)QELDVKPSASPQER;S(0.007)GS(0.154)S(0.839)QELDVKPSASPQER 117.22 1.2856e-10 58838000.0 15794.8 18620.3 17453.3 17199.0 19718.6 15596.3 13064.8 15937.0 21946.8 22964.8 25311.3 True False 18460.57609421539 19567.993736268294 19928.440383305213 21412.75577209244 16818.020061071464 17246.690114013945 15438.505046489594 18196.118555015564 16975.88484183797 17777.035730253716 19025.80565365797 0.9702914257755015 1.0284975097759437 1.0474426547857487 1.1254585567563362 0.8839583651396108 0.9064893454694799 0.8114507909693344 0.9563914867130534 0.8922557683424105 0.934364412938058 1.0 14.215669925941999 -6.77319212175404 24.985940766607786 0.9309577963212626 1.0422150544706297 0.5305595357543629 0.05746995036977349 170.9486885383785 363431.42628490424 0.009633770194836298 0.018311802412800723 1.6858070986515667e-07 6.77319212175404 0.11125725814936704 SGSS(ph)QELDVKPSASPQER ddPTM_A549_PD325901_60min_R1 1 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.012)GS(0.051)S(0.937)QELDVKPSASPQER 125.91 1.6183e-11 71552000.0 17136.0 14541.0 15464.0 16895.0 18192.0 14549.0 15743.0 16738.0 15457.0 17344.0 19969.0 True False 18875.634105143552 15766.42110164393 16513.480032586216 17938.565778671044 16914.256678992955 14430.517767705574 16342.108479900142 16404.147459293024 14807.396043165416 16248.896880054433 17512.939593920608 1.0778107241171542 0.9002726822124734 0.9429302227661802 1.0243035261138105 0.9658148244207113 0.8239917513742206 0.9331447980082735 0.9366872632272147 0.8455117408333672 0.9278223563161851 1.0 14.09613364388204 -7.021733473887647 24.7356008573317 0.9192064283923682 0.9793295576940962 0.24841499115542942 0.060972821051973554 1057.5158357483665 1203594.3877355203 0.010566440641342925 0.018418226800275807 9.51188357966231e-08 7.021733473887647 0.06012312930172803 SGSS(ph)S(ph)VAAMKK ddPTM_A549_PD325901_60min_R1 1 SGSSSVAAMKK 11 1 P63218 P63218 GNG5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 2 S(0.001)GS(0.01)S(0.989)S(1)VAAMKK 50.878 0.021046000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGSS(ph)SPDSEITELK ddPTM_A549_MK2206_60min_R1 1 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 SGS(0.002)S(0.499)S(0.499)PDSEITELK 244.15 9.0004e-58 97234000.0 5005.5 5422.3 4352.8 3996.8 6133.9 6038.2 6049.1 6567.3 6814.8 6147.0 7450.8 True False 5850.306027274487 5698.271909484142 4970.092492563064 4976.016179423172 5231.611435528194 6677.158316167235 7148.14316918133 7498.2348865127515 5271.258680999391 4758.388430723087 5600.560728381189 1.0445929097112898 1.0174466782598743 0.8874276583372827 0.8884853536551977 0.934122793993944 1.1922303212123604 1.2763263387106352 1.338836457663066 0.9412019504202429 0.8496271465479625 1.0 12.451355561753207 -5.263901957861211 9.455706068248755 1.0166169254220594 1.0446808830116896 0.0 0.15836579641343326 0.940993952597423 2126.7585398217834 0.02236859681746395 0.17086279065912754 5.44625588392125e-06 5.263901957861211 0.028063957589630206 SGSSFS(ph)RR ddPTM_A549_MK2206_60min_R1 1 SGSSFSRR 8 1 A6PW57;Q99755-4;Q99755-3;Q99755 A6PW57 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha 1 S(0.005)GS(0.005)S(0.131)FS(0.859)RR 43.442 0.05567999999999999 3771400.0 952.76 898.83 1025.5 809.06 1382.7 878.01 419.76 678.01 1227.0 1392.0 1538.0 True False 1113.5625952544292 944.5766077866649 1170.9313203279326 1007.2797363200834 1179.3066616516141 970.9204354241316 496.02495853855197 774.1199938185415 949.0864591163718 1077.546233214014 1156.0721533594071 0.9632293209541893 0.8170567944585798 1.0128531484175503 0.8712948697821751 1.0200978011836808 0.83984415038694 0.429060553960376 0.6696121791092724 0.8209578064469767 0.9320752429532998 1.0 10.175015727522572 -5.236064321382315 20.999971672387368 0.8687415991718787 0.9632302818679875 0.019311155946586167 0.16615570601990676 3126.2161207807426 2586830.222851777 0.02470102952591031 1.6291067579008478 5.8067840951166505e-06 5.236064321382315 0.09448868269610888 SGSSFS(ph)RR ddPTM_A549_PD325901_60min_R1 1 SGSSFSRR 8 1 A6PW57;Q99755-4;Q99755-3;Q99755 A6PW57 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha 1 SGS(0.002)S(0.144)FS(0.855)RR 53.751000000000005 0.010199 28387000.0 2125.2 2640.2 2899.5 2735.2 3135.5 3520.8 2942.5 3316.2 2891.4 3099.7 3450.5 True False 2340.9487395104493 2862.698919782705 3096.2775061099155 2904.147091910093 2915.2732968877744 3492.1277721175193 3054.478447697783 3250.0557894914286 2769.88451311435 2903.9844130018882 3026.1103745216597 0.773583395774348 0.9459995061268097 1.0231872347350672 0.9596963535638234 0.9633730882498278 1.1539988103274401 1.0093744343943858 1.0740043776510195 0.91532831599118 0.9596425951452362 1.0 11.563248894117265 -5.284482534483168 3.2544894738390835 0.9864884427522972 0.749072646751613 0.5078126838185342 0.06391153834678388 0.2183391184591364 3.735998735682172 0.009580262327423615 0.12605859144431497 5.194185619400864e-06 5.284482534483168 -0.2374157960006842 SGSSQELDVKPSAS(ph)PQER ddPTM_A549_PD325901_60min_R1 2 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGSSQELDVKPS(0.018)AS(0.982)PQER;SGSSQELDVKPS(0.002)AS(0.998)PQER 149.07 1.3858000000000001e-17 101888000.0 19736.9 21056.0 21834.0 20778.0 24981.0 19161.1 21370.4 21136.0 21155.0 23481.0 25331.0 True False 21740.575558462166 22830.463016038426 23315.786538508008 22061.409869738203 23226.42073977148 19005.05835444245 22183.6622663316 20714.425899128775 20265.928918494166 21998.40565270746 22215.447586439117 0.9786242421572084 1.0276841340786098 1.0495303525975577 0.9930661889164483 1.0455076653035562 0.8554884289634402 0.9985692244109041 0.9324334258191311 0.9122449070467981 0.9902301345544735 1.0 14.439275587934553 SGSSS(ph)PDSEITELK ddPTM_A549_MK2206_60min_R1 1 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 SGS(0.001)S(0.125)S(0.869)PDS(0.005)EITELK 206.66 3.1072e-32 79721000.0 3094.6 3920.9 4412.9 3047.1 4974.5 4013.0 4684.5 4656.6 6137.0 5097.7 5967.9 True False 3616.892824294003 4120.45706248204 5038.715576279995 3793.6396367895168 4242.757639680302 4437.6529963861885 5535.6130128498335 5316.6873102394065 4746.979298775199 3946.126029493592 4485.905724339147 0.8062792770409447 0.918534029845011 1.1232326058350872 0.8456797511829981 0.9457973262033578 0.989243481491117 1.2340011924047571 1.1851981822517343 1.0581986315538348 0.8796720822916816 1.0 12.131183585768934 -7.52791633677465 24.999005820741978 1.0589916579674823 0.9370527929736139 0.2609546318966789 0.11390812012680929 160.86489903590675 798288.3521591926 0.01641466895924965 0.024393946987963443 2.9654025946873568e-08 7.52791633677465 -0.12193886499386841 SGSSS(ph)PDSEITELK ddPTM_A549_PD325901_60min_R1 2 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 SGSSS(1)PDSEITELK;SGS(0.007)S(0.077)S(0.916)PDSEITELK 264.75 1.7550999999999995e-83 272870000.0 96609.0 97897.0 101368.0 99250.0 121960.0 93954.0 100820.0 97231.0 97151.0 101614.0 104639.0 True False 106416.67456021323 106147.12375955151 108247.44205530251 105380.44708689571 113393.95033915904 93188.86977434934 104656.76027082113 95291.65142875623 93068.08132170308 95198.07469844626 91769.06636127278 1.1596137868644794 1.15667651386662 1.1795635103135769 1.1483221009576168 1.2356445895695864 1.015471481506493 1.1404361449947915 1.0383853209709673 1.014155259630913 1.037365623004971 1.0 16.48572030957259 -7.939022357656788 0.8338720169835442 1.0034236494785749 1.172417421219847 0.6487810698280605 0.04647233694416283 0.20339223674384077 0.28438571951969455 0.008340340748299481 0.013470068855429677 1.1507411467966849e-08 7.939022357656788 0.16899377174127217 SGSSS(ph)PDSEITELKFPSINHD ddPTM_A549_MK2206_60min_R1 2 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.024)GS(0.018)S(0.103)S(0.607)PDS(0.249)EITELKFPSINHD;S(0.018)GS(0.014)S(0.092)S(0.846)PDS(0.031)EITELKFPSINHD 208.17 1.4824999999999996e-67 62382000.0 2824.0 3279.6 2850.3 2966.8 4185.4 3191.8 3220.3 3093.7 4201.799999999999 4553.2 4696.0 True False 3300.6221598288207 3446.5176316958077 3254.5153996398894 3693.666133184715 3569.7332043658553 3529.5541574546314 3805.3868257616246 3532.241449058894 3250.099008895818 3524.628957665261 3529.853596993352 0.9350592224675309 0.9763910986652455 0.9219972755844635 1.0464077423298503 1.011297807763606 0.9999151694169482 1.0780579763996347 1.000676473400363 0.9207461215003867 0.9985198708148857 1.0 11.785392632670797 -2.0835595262782522 17.456896156536335 0.9781997357154408 0.004929282398641099 0.0 0.04853154114567306 0.0 0.0 0.007004852705228401 0.0 0.008249744031728418 2.0835595262782522 -0.9732704533167997 SGSSS(ph)PDSEITELKFPSINHD ddPTM_A549_PD325901_60min_R1 2 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.011)GS(0.008)S(0.096)S(0.871)PDS(0.014)EITELKFPSINHD;S(0.012)GS(0.009)S(0.068)S(0.776)PDS(0.135)EITELKFPSINHD 282.75 4.835799999999998e-128 102206000.0 6001.4 7005.5 5812.1 6680.0 7350.8 7609.1 6452.1 7136.3 6617.5 6122.4 7393.0 True False 6610.657710002828 7595.878070804386 6206.544056996537 7092.608428619276 6834.50516688332 7547.134012389064 6697.638196224591 6993.9608981809515 6339.38948797614 5735.830619144676 6483.707868088289 1.0195798213764944 1.1715330525901715 0.9572522672627024 1.0939123990344928 1.0541044269624786 1.1640151231265028 1.0329950596924997 1.078697720574988 0.9777413814674688 0.8846528461554325 1.0 12.662603374475774 -8.758916719163942 24.99805334308192 0.9894889828235817 1.0730027376112257 0.35433681079311186 0.06599598477766198 54.5107777758217 540168.9934246639 0.008981115221864849 0.009956232674882073 1.7421409164153215e-09 8.758916719163942 0.083513754787644 SGSSSPDS(ph)EITELKFPS(ph)INHD ddPTM_A549_PD325901_60min_R1 1 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 S(0.124)GS(0.143)S(0.189)S(0.207)PDS(0.265)EIT(0.076)ELKFPS(0.996)INHD 49.793 0.0037635999999999998 1458800.0 628.78 495.12 582.84 581.31 653.59 508.25 805.87 779.69 534.99 643.77 757.44 True False 692.6132827166292 536.8455000237914 622.3950273016396 617.2161984492022 607.6840931630938 504.11098050975016 836.5378238389848 764.138471295028 512.5062307778395 603.1222523335241 664.2796818077634 1.0426531198903437 0.8081618552035582 0.9369472593348944 0.9291511020922948 0.9148015659749656 0.7588836363892211 1.2593156869745585 1.150326424579945 0.7715217623141968 0.9079342163412162 1.0 9.375646977436165 -11.465928541401937 2.397798868076882 1.0013205189673242 0.9163256810742115 0.0 0.152065071076783 1.045322206474548 10.891364746996144 0.1325251210257909 0.02303051473055356 3.420357162706035e-12 11.465928541401937 -0.08499483789311268 SGSYS(ph)GRSPS(ph)PYGR ddPTM_A549_PD325901_60min_R1 1 SGSYSGRSPSPYGR 14 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.003)GS(0.01)Y(0.009)S(0.589)GRS(0.402)PS(0.969)PY(0.019)GR 59.63399999999999 0.024572 14585000.0 2645.2 2066.8 2541.4 2642.1 2992.9 2366.3 2139.1 2263.2 3037.4 3038.4 2931.6 True False 2913.73875670668 2240.97648943523 2713.8746866796832 2805.2965163555355 2782.689028944482 2347.0296373442648 2220.5046210604332 2218.0587005539464 2909.748640843027 2846.554905463414 2571.0317849435455 1.1332955017398432 0.8716253538983134 1.055558590357635 1.0911170109929753 1.082323853497433 0.9128746097535315 0.8636628430905186 0.8627115049854004 1.1317435505399318 1.1071644162990846 1.0 11.328131730577326 -8.78810116143016 24.99587370018629 1.0622122111193708 0.9832222375668508 0.15164551922883296 0.09824024851209091 377.60662540678817 354010.7982901569 0.018278663689891134 0.01946176817725427 1.6289165603485542e-09 8.78810116143016 -0.07898997355252002 SGSYS(ph)LPR ddPTM_A549_MK2206_60min_R1 2 SGSYSLPR 8 0 Q9BW04 Q9BW04 SARG Specifically androgen-regulated gene protein 1 S(0.005)GS(0.069)Y(0.004)S(0.923)LPR;S(0.007)GS(0.029)Y(0.003)S(0.961)LPR 61.593 0.010759999999999999 23088000.0 3046.2 3082.3999999999996 2722.0 2221.48 3540.4 2977.2 2545.4 2529.88 3402.2 3872.3 3922.7 True False 3560.3240875603938 3239.28099400511 3108.020530407246 2765.7426997260263 3019.61184993952 3292.245327894583 3007.866231808723 2888.4982374325627 2631.607132197001 2997.5447405708496 2948.58532898761 1.2074685621469952 1.0985881813083938 1.054071761075464 0.9379897107049765 1.0240883383138506 1.11655080676433 1.0201048625720006 0.9796217219951786 0.8924982113712672 1.0166043733250378 1.0 11.525807229517525 -8.19483668849 2.7883734212521327 0.949220315342314 1.0649489443033306 0.29327902784674886 0.06958436623399449 0.23971262168107355 3.672276321049849 0.012336235720133535 0.016044276066131055 6.38503543061747e-09 8.19483668849 0.11572862896101666 SGSYS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 SGSYSLPR 8 0 Q9BW04 Q9BW04 SARG Specifically androgen-regulated gene protein 1 S(0.006)GS(0.026)Y(0.004)S(0.964)LPR;S(0.007)GS(0.023)Y(0.001)S(0.969)LPR 61.65 0.010733 37034000.0 4137.7 4420.8 4478.700000000001 4316.3 5128.7 4504.1 4913.7 4801.4 4781.3 5307.4 5665.7 True False 4557.756257986253 4793.356330798948 4782.651514610964 4582.908047971463 4768.477805054485 4467.420102929597 5100.693542379812 4705.6323103745635 4580.358588418634 4972.289858233449 4968.854817831434 0.9172649282547166 0.9646802948633788 0.9625259118957846 0.9223268169408076 0.9596734015938907 0.8990844503843486 1.0265330200583154 0.9470255185335141 0.9218137289866819 1.0006913143023797 1.0 12.278697673872601 SGSYSGRS(ph)PS(ph)PYGR ddPTM_A549_MK2206_60min_R1 3 SGSYSGRSPSPYGR 14 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.007)GS(0.003)Y(0.004)S(0.037)GRS(0.95)PS(0.972)PY(0.028)GR;S(0.011)GS(0.069)Y(0.189)S(0.308)GRS(0.713)PS(0.661)PY(0.049)GR;S(0.042)GS(0.018)Y(0.021)S(0.053)GRS(0.872)PS(0.802)PY(0.192)GR 57.413999999999994 0.0038692 34145700.0 4915.6 5131.9 3980.7400000000002 3591.1000000000004 5002.8 3884.67 4031.41 3889.9199999999996 5122.6 7098.700000000001 6876.7 True False 5745.233105118465 5393.09178988283 4545.268789938777 4470.919661210607 4266.894747169087 4295.743200964753 4763.865013583726 4441.32807238038 3962.3392791112688 5495.098739738732 5169.025602735135 1.111473137621612 1.0433478578688278 0.8793279699627907 0.86494438310479 0.8254737111209712 0.8310547347050682 0.9216176083676152 0.8592195925727856 0.7665543921884695 1.0630821284442968 1.0 12.335676632786216 -5.672149896765988 3.2962409743276737 0.8769615057650292 1.100113312167059 0.4535854233219272 0.07952992284733053 0.15842801975684806 3.2784144770603745 0.01168774111381489 0.055726085745333435 2.1274046454122378e-06 5.672149896765988 0.2231518064020298 SGSYSGRS(ph)PS(ph)PYGR ddPTM_A549_PD325901_60min_R1 1 SGSYSGRSPSPYGR 14 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.053)GS(0.024)Y(0.017)S(0.099)GRS(0.824)PS(0.975)PY(0.007)GR 54.953 0.0049304 20176000.0 2209.5 2662.8 2578.2 3100.9 3103.5 3056.3 2590.0 2747.6 3696.3 3129.5 3716.5 True False 2433.8068134520704 2887.2035010974137 2753.1721559760604 3292.435550345133 2885.520866493769 3031.410506113036 2688.5638673023823 2692.796962549497 3540.9573652294957 2931.9028359161903 3259.39406083459 0.7467052979868527 0.8858098920257974 0.8446883391789368 1.0101373104613445 0.885293650487573 0.9300533932177635 0.8248661613545302 0.826164898226509 1.0863851682673833 0.8995238934581161 1.0 11.670388069154665 -8.762062181961161 24.999995572086544 1.0407930008192459 0.8747335143667524 0.29502984619796924 0.07831636832406398 9.000041257016298 361269.69602392294 0.011773124230706785 0.012904830032436523 1.7295687031243801e-09 8.762062181961161 -0.16605948645249347 SGT(ph)FDLLEMDR ddPTM_A549_PD325901_60min_R1 1 SGTFDLLEMDR 11 0 H0YA31;H0YA26;E9PHT6;Q9NVE7 H0YA31 PANK4 Pantothenate kinase 4 1 S(0.163)GT(0.837)FDLLEMDR 77.593 0.0011949999999999999 1740900.0 617.13 513.95 618.99 635.82 738.65 422.28 402.01 444.58 450.71 492.78 680.88 True False 679.7805832929055 557.2623702076822 660.9983836892487 675.09315734801 686.7697722041637 418.84109168648774 417.30871053831277 435.712503133737 431.7682260862448 461.66578670163915 597.1360764539363 1.138401463414754 0.9332250925399749 1.1069476619375531 1.130551617910976 1.1501059796663313 0.7014164914867568 0.698850273821137 0.729670372155698 0.7230650485066645 0.7731333022838263 1.0 9.221915922697065 -7.252512414655754 24.983581087654933 0.8298646438062742 1.0860233296030175 0.6842140876591631 0.10439923509879817 465.65957315402744 1303224.4535457287 0.020339661884875775 0.03490704342619241 5.590975450908091e-08 7.252512414655754 0.2561586857967433 SGT(ph)NSPPPPFSDWGR ddPTM_A549_MK2206_60min_R1 1 SGTNSPPPPFSDWGR 15 0 D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5 D6RAU6 FBXO4 F-box only protein 4 1 S(0.008)GT(0.496)NS(0.496)PPPPFSDWGR 156.0 2.0297e-19 8031200.0 8017.2 7576.1 6712.3 6089.6 9902.0 8141.3 6870.4 7362.3 11566.0 10412.0 11914.0 True False 9370.3073582789 7961.69112986054 7664.205072098666 7581.552273372536 8445.428917100084 9002.806962242432 8118.662748101937 8405.928571098138 8946.31946710673 8059.921968551947 8955.424990327683 1.0463274906996944 0.8890355442047221 0.8558170137515975 0.846587658493148 0.9430517173915899 1.00529086804545 0.9065636479419467 0.9386409444752171 0.9989832394073104 0.9000044081947061 1.0 13.128546183304312 -8.37677199729538 0.7767428911704941 1.0024585709661065 0.9140992780683385 0.0 0.06441212149971443 0.5513499099426736 0.6696813107763891 0.013190663468443975 0.01675633682172689 4.199794134799568e-09 8.37677199729538 -0.088359292897768 SGT(ph)PPR ddPTM_A549_PD325901_60min_R1 1 SGTPPR 6 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.026)GT(0.974)PPR 81.89 0.044512 376780000.0 3896.9 3923.4 2989.9 2780.0 3435.0 2215.9 2083.8 2123.0 3013.1 3754.5 5391.6 True False 4292.510419253845 4254.038687173499 3192.8125937292784 2951.7142861619136 3193.7374501066847 2197.8544450793024 2163.100149299112 2080.6550995387192 2886.4698853374985 3517.4402292530212 4728.467380168378 0.907801635104225 0.8996654402260071 0.6752320227734306 0.6242433433170484 0.675427616039292 0.4648132826922532 0.4574632698898063 0.4400273772142694 0.6104451301585827 0.7438859034970792 1.0 12.207156928833507 -10.579849787974704 0.9703259811929249 0.9907243348480879 0.6351323930112748 0.17370672724336567 0.1662626791149553 0.4276420916581974 0.7452546592801356 0.09877408286253134 0.03025119564420438 2.6311778957369257e-11 10.579849787974704 -0.3555919418368131 SGT(ph)PPRQGS(ph)ITSPQANEQSVT(ph)PQRR ddPTM_A549_PD325901_60min_R1 2 SGTPPRQGSITSPQANEQSVTPQRR 25 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.156)GT(0.695)PPRQGS(0.412)IT(0.385)S(0.385)PQANEQS(0.258)VT(0.71)PQRR;S(0.149)GT(0.658)PPRQGS(0.456)IT(0.401)S(0.336)PQANEQS(0.248)VT(0.752)PQRR 64.70100000000001 9.5658e-05 128747000.0 1483.59 1877.88 1449.05 1805.45 1617.93 1235.62 1682.59 1817.18 2011.02 2121.8 2015.85 True False 1634.2029646387662 2036.135538020433 1547.391246845517 1916.9685460255487 1504.292178355489 1225.5575203885046 1746.6218831985764 1780.9349193498674 1926.5038229104307 1987.8291858913478 1767.9132295260065 0.9243683102461486 1.1517168965166573 0.8752642499656991 1.0843114435766201 0.8508857523277901 0.6932226649591211 0.9879567922385317 1.0073655706662437 1.0897049644381833 1.124392958145521 1.0 10.787831752601544 -8.213849800456037 3.6938579493556474 1.0415079121834354 0.9351663551757684 0.19051275603261342 0.11744416077113146 0.3523772490779754 10.011353342722808 0.01924673540233653 0.02476344506719776 6.111533540548221e-09 8.213849800456037 -0.10634155700766701 SGT(ph)PPRQGS(ph)ITSPQANEQSVTPQR ddPTM_A549_MK2206_60min_R1 1 SGTPPRQGSITSPQANEQSVTPQR 24 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.476)GT(0.518)PPRQGS(0.363)IT(0.307)S(0.334)PQANEQS(0.001)VTPQR 47.159 0.005984399999999999 5539600.0 917.09 1455.8 914.41 738.53 1384.5 850.74 849.17 1267.6 1675.0 1308.4 1773.0 True False 1071.8723713021996 1529.8940017754476 1044.087087880122 919.4698831538711 1180.8418840360596 940.7647421244918 1003.4531971654802 1447.2861818621896 1295.6151744253648 1012.8315312767356 1332.7151676893561 0.8042771608584584 1.1479527200309108 0.783428532362505 0.6899222770519193 0.8860422036641089 0.7059008293239262 0.7529389786305607 1.085968117532177 0.9721620987263807 0.7599759917438094 1.0 10.380152760459435 -8.257844963199682 24.997332706760773 0.9939205533130614 0.8278705640421612 0.14828262204629117 0.13869606267249868 298.5359899622889 2076167.333509926 0.01937223771161063 0.024502963444570165 5.5227455806237764e-09 8.257844963199682 -0.1660499892709002 SGT(ph)PPRQGSITS(ph)PQANEQSVTPQR ddPTM_A549_MK2206_60min_R1 1 SGTPPRQGSITSPQANEQSVTPQR 24 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.293)GT(0.689)PPRQGS(0.311)IT(0.26)S(0.446)PQANEQSVTPQR 57.144 0.0014909 6038200.0 1150.9 1177.0 1372.3 1130.2 1527.3 1117.8 1189.0 1037.1 1674.9 1603.3 2019.4 True False 1345.1437831965259 1236.9042726265307 1566.9127751204499 1407.0990507366052 1302.636193202076 1236.084854064411 1405.025909334712 1184.1121009855447 1295.5378242656973 1241.1134164597906 1517.9272473953097 0.8861714456372847 0.814864002704345 1.0322713277656732 0.9269871485284421 0.8581677385641091 0.8143241754079277 0.9256213772732975 0.7800848841849464 0.8534913820730065 0.8176369576272392 1.0 10.567886930265754 -10.741050567805804 1.0416800662695758 0.9986064137265498 0.8767954346463533 0.0 0.0842717985121501 0.493529911358046 0.968153684796477 0.04279096602732814 0.011515369659488626 1.8153042824708953e-11 10.741050567805804 -0.12181097908019645 SGT(ph)PPRQGSITSPQANEQSVTPQR ddPTM_A549_PD325901_60min_R1 1 SGTPPRQGSITSPQANEQSVTPQR 24 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.201)GT(0.778)PPRQGS(0.012)IT(0.005)S(0.005)PQANEQSVTPQR 90.51799999999999 1.074e-07 18738000.0 2810.6 2355.9 2651.5 2792.9 3184.8 2911.6 2793.3 3111.8 3082.6 3344.5 3262.8 True False 3095.930042945638 2554.4399610317705 2831.446734764767 2965.411089863887 2961.1106349635415 2887.888894937902 2899.6005600524118 3049.732707840126 2953.0490420302604 3133.327699224058 2861.496284593328 1.0819269833109804 0.892693789184774 0.9894986584500034 1.0363148489236382 1.0348119796298707 1.009223359990602 1.0133162065120414 1.0657825153435592 1.0319947147685862 1.0949962493728564 1.0 11.48255401833483 -6.074002400364387 6.927024107423868 1.020842852140593 0.9762116346526255 0.09845314006715944 0.04941869291291294 0.31529390176139466 25.179573629814342 0.0055828438839452665 0.015008943521390419 8.433300966294715e-07 6.074002400364387 -0.0446312174879675 SGT(ph)PTQDEMMDKPTSSSVDTMSLLSK ddPTM_A549_MK2206_60min_R1 2 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.213)GT(0.735)PT(0.047)QDEMMDKPT(0.001)S(0.001)S(0.001)S(0.001)VDT(0.001)MSLLSK;S(0.162)GT(0.581)PT(0.162)QDEMMDKPT(0.034)S(0.034)S(0.011)S(0.011)VDT(0.004)MS(0.001)LLSK 64.633 0.00010641 27219300.0 1644.75 2237.3999999999996 1799.75 1451.5900000000001 2923.0 2246.1 2029.44 1431.8000000000002 2709.1000000000004 3076.8999999999996 2961.0 True False 1922.3435897232469 2351.274103291927 2054.981612637928 1807.2296151643507 2493.030572074687 2483.7808111594863 2398.1629785031428 1634.7620347036009 2095.493175543734 2381.8261530001428 2225.7019805573495 0.8637021517327593 1.0564191090413337 0.9232959446454414 0.8119818515468064 1.1201097873177046 1.1159539025694312 1.077486114247248 0.7344927797989521 0.9414976460680468 1.070146036534369 1.0 11.120044714738299 -5.220061895087476 21.353801431841053 0.9726483720880572 0.8637000621562542 0.0703754276624261 0.11927111657758019 7487.023327288071 3863307.67409546 0.015449994611657736 5.066155991042652 6.0247371618118986e-06 5.220061895087476 -0.10894830993180304 SGT(ph)PTQDEMMDKPTSSSVDTMSLLSK ddPTM_A549_PD325901_60min_R1 1 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.145)GT(0.502)PT(0.142)QDEMMDKPT(0.044)S(0.044)S(0.044)S(0.044)VDT(0.02)MS(0.012)LLS(0.002)K 45.325 0.007707600000000001 2938200.0 1208.8 1435.0 1072.7 1542.1 1174.2 1350.6 1644.0 1433.2 1716.4 1615.9 1590.8 True False 1331.5164861284727 1555.9324861329371 1145.4998726691188 1637.3520146367932 1091.7282427700927 1339.6011613900034 1706.5633196313192 1404.6137016763507 1644.2656769417827 1513.8717982287812 1395.1416849120583 0.9543951704176941 1.1152505175350804 0.8210634697947001 1.1736098436052411 0.7825214131128976 0.9601900479910356 1.2232186437314367 1.0067892866127712 1.1785653706171269 1.0851025487953985 1.0 10.446195928394124 SGT(ph)TPKPVINSTPGRT(ph)PLRDK ddPTM_A549_MK2206_60min_R1 1 SGTTPKPVINSTPGRTPLRDK 21 3 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 2 S(0.305)GT(0.348)T(0.348)PKPVINS(0.031)T(0.029)PGRT(0.941)PLRDK 53.55 0.0065134 4364700.0 1056.3 1447.2 1169.0 1279.7 1663.6 1534.2 1304.6 1286.3 2331.5 1698.0 1948.0 True False 1234.5776159444692 1520.8562985090182 1334.7817781212602 1593.2265574479152 1418.8866437575941 1696.548025680461 1541.628932984074 1468.636964128538 1803.4189726404395 1314.4206206877836 1464.2578379350612 0.8431422280692766 1.038653343084558 0.9115756416258001 1.0880778754749434 0.9690142043279407 1.1586402215015508 1.0528398025569894 1.0029906797013648 1.2316266479294884 0.8976701962144985 1.0 10.515953901643087 -5.525204323412703 0.5534333530281501 1.1017791607050507 0.7876819328934911 0.12397253113913131 0.10225569542509408 2.649112139099686 0.6440710943776241 0.018397789830807913 0.5021719562894255 2.9839784102007718e-06 5.525204323412703 -0.3140972278115596 SGT(ph)WKR ddPTM_A549_PD325901_60min_R1 1 SGTWKR 6 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.02)GT(0.98)WKR 55.676 0.048713 21758000.0 5770.5 5250.5 4175.5 5001.5 3772.5 4958.2 3803.7 4250.2 6911.8 6152.0 7976.0 True False 6356.316911982423 5692.978061631356 4458.874539321246 5310.431295769353 3507.5326144184764 4917.822063085971 3948.451884964507 4165.426426782599 6621.321082431958 5763.561670093113 6995.002564029782 0.9086940074430201 0.8138636132753128 0.6374371558132086 0.7591750320546049 0.5014340712975817 0.703047928584724 0.5644675393356576 0.5954860471677826 0.9465787927627938 0.8239541897712698 1.0 12.77210887087447 -8.822054378862312 6.818881926926534 0.9758915200513016 0.6812014703843238 0.4263990285635373 0.11885691913706348 0.10619695976008761 9.490075125365568 0.01952115977122956 0.0207748264407014 1.5064184327762759e-09 8.822054378862312 -0.29469004966697787 SGTAT(ph)PQR ddPTM_A549_MK2206_60min_R1 1 SGTATPQR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.004)GT(0.013)AT(0.983)PQR 70.1 0.0071594 78555000.0 2163.7 1415.6 818.95 775.67 1362.5 1232.5 1390.8 1401.2 1412.9 2461.3 2937.1 True False 2528.879662613887 1487.6479934835306 935.0894244588595 965.7091848211494 1162.0780548928356 1362.9223319327134 1643.490357193202 1599.8243909950306 1092.8804059376707 1905.2906205529105 2207.7370101637925 1.1454623675608304 0.6738338790511835 0.4235510933385517 0.43742039037045594 0.5263661611609349 0.6173390787300331 0.7444230674337752 0.7246444588417437 0.49502291301289986 0.8630061514489701 1.0 11.10835261043312 -10.910373777982002 1.0814729635522868 1.0069738220521083 0.6216087351306585 0.23237129975391713 0.1945579512019123 0.49689179320098237 1.000875877812278 0.14913520021133986 0.03286112233671134 1.2292103886102742e-11 10.910373777982002 -0.3853650869214498 SGTAT(ph)PQR ddPTM_A549_PD325901_60min_R1 2 SGTATPQR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.006)GT(0.003)AT(0.991)PQR;S(0.014)GT(0.034)AT(0.953)PQR 97.85700000000001 0.0025956 218821000.0 5055.700000000001 5088.4 3467.38 3703.0 4821.1 3221.1 2942.48 3717.7 4643.200000000001 5821.0 6948.0 True False 5568.950942190374 5517.217325741351 3702.6972578497666 3931.725899876821 4482.482567892091 3194.8684295523008 3054.45768658684 3643.547557020772 4448.062451162949 5453.461066581925 6093.440047000864 0.9139256149621692 0.905435564013939 0.6076530218217542 0.64523912101375 0.7356242997907771 0.5243127699475415 0.5012698349416298 0.5979459105065115 0.7299755830620251 0.894972466212426 1.0 12.573041215186667 -10.161383191152213 0.8656766873554096 0.9810741263975206 0.6782372048957402 0.3668955343852116 0.13116238256910687 0.4018841509262787 0.594781991699999 0.0652691928488909 0.027518532381087413 6.896310529911477e-11 10.161383191152213 -0.3028369215017803 SGTLKS(ph)PPKGFDTTAINK ddPTM_A549_PD325901_60min_R1 2 SGTLKSPPKGFDTTAINK 18 2 B1ALK7;A0A2R8YG42;Q14155-6;Q14155-2;Q14155-3;Q14155;E7EUY6;E7EU80;Q14155-1;Q14155-5 B1ALK7;Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 S(0.024)GT(0.015)LKS(0.959)PPKGFDT(0.001)TAINK;S(0.105)GT(0.093)LKS(0.801)PPKGFDTTAINK 117.4 9.2943e-11 42955000.0 10742.8 10166.7 12068.5 11425.8 14781.9 13659.3 13680.8 13463.2 13600.7 13118.7 14303.9 True False 11833.40114756863 11023.483489036757 12887.540983786002 12131.545716125464 13743.670338786611 13548.063189526476 14201.430330421017 13194.665914323914 13029.109876708288 12290.383043148659 12544.610979892883 0.9433055490150938 0.8787425538110138 1.027336838459382 0.9670722938774665 1.0955836223869866 1.0799906996910447 1.1320741913148016 1.0518194574126667 1.0386220742589773 0.9797340916229517 1.0 13.614780111669074 -5.77407309685688 22.853619724614866 1.0347228489777602 0.9110240921634181 0.5085200734452537 0.04906653780295365 44.37168905182082 80267.71550878212 0.0069891803417414956 0.021996847865714094 1.6823908711159436e-06 5.77407309685688 -0.12369875681434217 SGTLS(ph)PEIFEK ddPTM_A549_MK2206_60min_R1 2 SGTLSPEIFEK 11 0 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 SGTLS(0.999)PEIFEK;SGT(0.01)LS(0.99)PEIFEK 117.98 1.6461e-05 7995700.0 2818.3999999999996 3733.8 3305.3 2556.7 4374.5 3243.1 3111.3999999999996 3462.9 4717.5 4932.9 4575.6 True False 3294.0770167356754 3923.834471650753 3774.041241423612 3183.0916147746248 3731.0168448651093 3586.2826894044506 3676.7011053860574 3953.776679686478 3648.9937822994975 3818.5544639521613 3439.3522398643063 0.9577608767590602 1.1408643831739553 1.0973116384184338 0.9254916021338391 1.0848021908370484 1.0427203843320048 1.0690097579336961 1.149570152733896 1.0609537865896115 1.110253965759208 1.0 11.747921161120654 -10.458627431174667 1.0512730666104724 1.0036162414263843 1.0605376620271443 0.0 0.0718086491094487 0.8308181687881988 1.7730840279004347 0.02975218049461204 0.011114272628419266 3.4783443070472556e-11 10.458627431174667 0.05692142060076 SGTLS(ph)PEIFEK ddPTM_A549_PD325901_60min_R1 2 SGTLSPEIFEK 11 0 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 SGT(0.001)LS(0.999)PEIFEK;S(0.001)GT(0.029)LS(0.97)PEIFEK 110.31 8.598799999999999e-05 11268800.0 4527.4 5052.9 4916.0 5353.9 5849.9 5104.1 5027.6 5377.299999999999 5142.6 5602.0 5628.9 True False 4987.018315104276 5478.7256161540945 5249.629322309485 5684.598243410888 5439.023205059411 5062.533901858961 5218.928069208287 5270.0455330897585 4926.474405873228 5248.288763956696 4936.580984537014 1.0102170572558715 1.1098218854942834 1.063413998221247 1.151525369727937 1.1017793938955343 1.0255142005603621 1.0571948653441878 1.0675496967632587 0.9979527169319325 1.0631424421874274 1.0 12.269296479430148 -8.388576620140276 0.9401892089959528 0.9972336759539854 1.0851173361955282 0.17012592346224398 0.04237001386476001 0.30299741704801825 0.5264483945806281 0.007685283787441331 0.009615862415274089 4.08717637988844e-09 8.388576620140276 0.08788366024154282 SGTNS(ph)PPPPFSDWGR ddPTM_A549_PD325901_60min_R1 2 SGTNSPPPPFSDWGR 15 0 D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5 D6RAU6 FBXO4 F-box only protein 4 1 SGT(0.007)NS(0.993)PPPPFSDWGR;SGT(0.001)NS(0.999)PPPPFSDWGR 169.92 3.5332999999999995e-27 19560800.0 21099.1 20106.3 19603.3 19594.4 20386.8 21529.6 20249.3 19305.7 23209.2 23324.8 27084.0 True False 23241.06509966353 21800.728464065982 20933.69782221918 20804.70158588885 18954.9014986419 21354.270075716133 21019.898192342127 18920.63266847135 22233.79803616709 21852.06814736472 23752.839699621687 0.9784541719461733 0.9178156691897855 0.8813134802805321 0.8758827091406763 0.7980057011433371 0.8990196686275049 0.884942535636146 0.7965629755322561 0.9360479975167436 0.9199770816334335 1.0 14.535812380389267 -9.283083032927816 1.7220638228331795 0.9804361513724772 0.8789719620978511 0.23121649183933612 0.05314910165937958 0.22120857385775708 1.3533932097473407 0.011057958952416234 0.009810610791700472 5.210950732144695e-10 9.283083032927816 -0.10146418927462608 SGTPT(ph)QDEMMDKPTSSSVDTMSLLSK ddPTM_A549_MK2206_60min_R1 2 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-5;Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-5;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.216)GT(0.198)PT(0.584)QDEMMDKPT(0.001)S(0.001)SSVDTMSLLSK;S(0.249)GT(0.23)PT(0.44)QDEMMDKPT(0.02)S(0.02)S(0.02)S(0.02)VDT(0.002)MSLLSK 69.619 4.1182e-05 32713000.0 2657.7 2642.8599999999997 2506.43 2694.4 3524.8999999999996 2685.43 2562.7 2829.2 3758.0 3902.3 3888.7 True False 3106.2547854734594 2777.370285432243 2861.879462905449 3354.5281209562118 3006.3918794067954 2969.600420155837 3028.3094178738984 3230.2477640616175 2906.8190002928463 3020.7677197349476 2923.0284673398723 1.062683726888344 0.9501687432965075 0.9790802569603189 1.1476207496566153 1.0285195347901586 1.0159327742908875 1.0360177643530917 1.1051030806420208 0.9944545640837438 1.0334376669564302 1.0 11.51324816426451 SGTS(ph)PAATAK ddPTM_A549_MK2206_60min_R1 2 SGTSPAATAK 10 0 Q8IXZ2;A0A0J9YYE2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 S(0.005)GT(0.194)S(0.8)PAAT(0.001)AK;S(0.006)GT(0.03)S(0.964)PAATAK 99.34299999999999 0.00047555 10354300.0 4212.0 3899.9 3167.1 2697.8999999999996 4984.6 3784.6000000000004 3415.1000000000004 4108.9 5023.2 6294.7 5814.700000000001 True False 4922.882626486894 4098.388252180295 3616.2424033257853 3358.8856211133348 4251.371943059694 4185.0838599858425 4035.5794642295805 4691.349157978502 3885.4532204020843 4872.722898140986 4370.749512444047 1.1263245840263456 0.9376854565816901 0.8273735186676588 0.7684919054615658 0.9726871629123403 0.9575208664029838 0.9233152009145807 1.073351182588174 0.888967260498396 1.1148483536445548 1.0 12.09366498433455 SGTS(ph)PAATAK ddPTM_A549_PD325901_60min_R1 1 SGTSPAATAK 10 0 Q8IXZ2;A0A0J9YYE2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 S(0.023)GT(0.156)S(0.805)PAAT(0.016)AK 44.299 0.058163 10198000.0 3916.2 4390.2 4418.9 4511.5 5132.0 4378.1 4260.1 4539.6 4208.3 5190.7 5737.0 True False 4313.769741045936 4760.177561408238 4718.793127004347 4790.165108640098 4771.546024438861 4342.446205154427 4422.2204367161685 4449.0541167526935 4031.439785757459 4862.958316149597 5031.385369839377 0.8573721597444741 0.9460967927328936 0.9378715363945559 0.9520568902065676 0.9483563022307689 0.863071676279302 0.8789269975671421 0.8842602563147983 0.8012583989141264 0.96652471609521 1.0 12.296739979128244 -7.241593598083166 23.92211944463873 0.8971794809665891 0.9311825678338513 0.06541599030677803 0.054515140696207956 1383.5590196283758 1667741.7811530426 0.011012435146651104 0.019051716218768458 5.733322900589114e-08 7.241593598083166 0.03400308686726228 SGTS(ph)SPQS(ph)PVFR ddPTM_A549_MK2206_60min_R1 1 SGTSSPQSPVFR 12 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 2 S(0.045)GT(0.166)S(0.677)S(0.186)PQS(0.926)PVFR 49.62 0.035482 7853300.0 4310.3 5691.3 4345.4 4574.9 4195.6 4659.1 3351.6 3604.2 6313.6 6953.1 7504.2 True False 5037.773263282635 5980.962860492244 4961.643061290099 5695.750705375061 3578.4327978777123 5152.122869539722 3960.542336186893 4115.106387399576 4883.5796807474535 5382.389880862328 5640.700034616166 0.893111357166051 1.0603228010331933 0.8796147695926406 1.0097595458756994 0.6343951594513774 0.9133835938663436 0.7021366695413005 0.7295382420879961 0.8657754624031816 0.9542060112807585 1.0 12.461658502924085 -4.91624307950705 16.407487039130746 0.896873705812652 0.8042702261693949 0.0 0.13133477402307353 115871.46861366837 565890.0113406128 0.018300969885855087 398645.96567092603 1.2127098931033019e-05 4.91624307950705 -0.0926034796432571 SGTSEFLNK ddPTM_A549_MK2206_60min_R1 1 SGTSEFLNK 9 0 P14625;Q96GW1;A0A1W2PRR1 P14625 HSP90B1 Endoplasmin 0 83.948 0.0012259999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGTSEFLNK ddPTM_A549_PD325901_60min_R1 2 SGTSEFLNK 9 0 P14625;Q96GW1;A0A1W2PRR1 P14625 HSP90B1 Endoplasmin 0 ; 103.55 0.0017907 13626200.0 12653.6 12220.400000000001 13065.9 14259.1 15618.900000000001 15276.5 13933.4 13907.2 14961.2 16186.099999999999 16297.4 False True 13938.184156912013 13250.255995497524 13952.630545639433 15139.852222234296 14521.882346279841 15152.093248907424 14463.643161649035 13629.80998601266 14332.432792974483 15164.1068836629 14292.92311773056 0.9751807969652836 0.9270501132872119 0.9761915341397878 1.059255136092708 1.0160190624873127 1.060111575784736 1.0119443757244238 0.9536054922946239 1.0027642823597722 1.0609521060707048 1.0 13.80301337899139 -6.0039494147911725 24.642274468968612 1.0074084691103373 0.951241780567973 0.3637247855978393 0.033786575639174934 110.70749141014846 690779.2828411063 0.004104145539296753 0.012348652938016244 9.909473604967842e-07 6.0039494147911725 -0.056166688542364285 SGTSGKPGDKGNGDAS(ph)PDGR ddPTM_A549_MK2206_60min_R1 1 SGTSGKPGDKGNGDASPDGR 20 2 Q99612;Q99612-3;Q99612-2 Q99612 KLF6 Krueppel-like factor 6 1 S(0.005)GT(0.005)S(0.005)GKPGDKGNGDAS(0.985)PDGR 41.423 0.017053 6621300.0 804.95 1470.0 1226.0 928.11 1454.1 1151.7 921.55 746.41 1247.9 1250.1 1437.2 True False 940.8058808619719 1544.8167211223447 1399.8652352238373 1155.4969916644409 1240.203816234622 1273.5721295634132 1088.9837062635852 852.2159032847567 965.252642486814 967.7015417678434 1080.3035752978797 0.8708717645431813 1.4299839012347817 1.2958072779106027 1.0696039688157355 1.14801417360176 1.1789020777907193 1.0080348997857496 0.7888670580857507 0.8935012940419623 0.8957681561879607 1.0 10.077221064675546 -7.855487512505682 3.950884491844466 0.9348443642279212 1.1788942536876703 0.4428536039340444 0.13948955187969755 0.16810980067292713 4.9774279060213615 0.021408624531327074 0.030231976675966755 1.3948017625213693e-08 7.855487512505682 0.24404988945974915 SGTSGKPGDKGNGDAS(ph)PDGR ddPTM_A549_PD325901_60min_R1 1 SGTSGKPGDKGNGDASPDGR 20 2 Q99612;Q99612-3;Q99612-2 Q99612 KLF6 Krueppel-like factor 6 1 S(0.004)GT(0.004)S(0.004)GKPGDKGNGDAS(0.989)PDGR 49.902 0.0030142 5417800.0 583.59 769.03 758.03 848.73 1235.0 1168.3 1187.2 878.78 945.85 785.26 1077.1 True False 642.8356271837487 833.8388570110201 809.4744742046908 901.1541244943163 1148.2578605187052 1158.7857521486305 1232.3795456607672 861.2520435104259 906.0992137819766 735.6785495866897 944.623528299458 0.6805204485441965 0.8827208216082908 0.8569281305769855 0.953982298235365 1.2155719459855465 1.2267170120510489 1.3046250794529086 0.9117410457273701 0.9592172824798952 0.778806082578826 1.0 9.883595659773272 -5.81974300735237 1.3945865095137673 1.0309746527837773 0.7159924873298692 0.3470719258233743 0.15071466013198692 0.5089379323058267 1.5790168131621791 0.021434703241485286 0.1680686100885262 1.5144571594797982e-06 5.81974300735237 -0.3149821654539081 SGTSGKPGDKGNGDAS(ph)PDGRR ddPTM_A549_MK2206_60min_R1 1 SGTSGKPGDKGNGDASPDGRR 21 3 Q99612;Q99612-3;Q99612-2 Q99612 KLF6 Krueppel-like factor 6 1 SGTSGKPGDKGNGDAS(0.999)PDGRR 49.25 0.0039808 5411900.0 344.93 324.85 314.16 237.97 261.35 315.07 177.24 264.59 294.93 268.87 300.26 True False 403.1457512711595 341.383477453465 358.712611988516 296.2726606828793 222.90576120825148 348.41049827346063 209.44221376827946 302.0964427728913 228.1288259064315 208.13208026167513 225.69715524557583 1.7862243360245547 1.5125732403760852 1.5893537142646268 1.312700022118187 0.987632125738195 1.5437079740520578 0.9279789704942902 1.3385035466848803 1.010774042137172 0.9221741409864534 1.0 7.818244424259436 -2.0000000000084928 0.2365724951226294 0.9677120671398348 5.812765969074303 0.6541149065285141 0.17432080406596456 17.806863016788874 0.2125273739741509 0.08310376256080372 34.23584416839772 0.009999999999804447 2.0000000000084928 4.8450539019344685 SGTSGKPGDKGNGDAS(ph)PDGRR ddPTM_A549_PD325901_60min_R1 1 SGTSGKPGDKGNGDASPDGRR 21 3 Q99612;Q99612-3;Q99612-2 Q99612 KLF6 Krueppel-like factor 6 1 S(0.005)GT(0.005)S(0.005)GKPGDKGNGDAS(0.985)PDGRR 40.937 0.025347 5938300.0 276.08 313.93 271.7 162.15 326.96 336.1 226.01 400.9 423.84 428.12 379.01 True False 304.1074383606458 340.38598283743084 290.1391958648265 172.165637230631 303.9954575507659 333.3629130336001 234.6109342274175 392.9037350000343 406.02747874330305 401.0884301365835 332.3941727423432 0.9149000292384067 1.0240431714826799 0.872876902356917 0.5179562439684704 0.9145631376227805 1.002914432233467 0.7058214417292965 1.1820415856224873 1.221524057998565 1.2066650471862783 1.0 8.376751279977402 -8.272432589938672 24.807905579057877 1.1133389482433893 0.8535223045365405 0.49394439719911576 0.14512154534071273 509.91317303043473 1150696.9312152688 0.02559421874884226 0.031093441975850556 5.34032158225801e-09 8.272432589938672 -0.25981664370684876 SGTSSPQS(ph)PVFR ddPTM_A549_MK2206_60min_R1 3 SGTSSPQSPVFR 12 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SGT(0.007)S(0.026)S(0.024)PQS(0.943)PVFR;SGT(0.019)S(0.011)S(0.011)PQS(0.959)PVFR;SGTS(0.001)S(0.006)PQS(0.994)PVFR 157.22 8.1688e-14 494006000.0 15474.599999999999 18978.9 15971.6 15240.099999999999 22332.4 17400.8 14514.9 15820.8 24855.699999999997 25199.6 27530.3 True False 18086.33416235377 19944.84494456385 18236.61304314929 18973.925184154083 19047.333543551384 19242.141106283794 17152.06944609116 18063.446849167987 19225.923636396743 19506.99285811771 20693.766712373523 0.8739991328663874 0.963809306530847 0.8812611689608438 0.9168908419562357 0.9204382077121958 0.9298520358199578 0.8288519767566213 0.8728931325183648 0.929068347180163 0.9426506604258662 1.0 14.336908650298811 -9.879093504034731 0.8982151299334283 0.9914501702602833 0.9016897488674134 0.3133368034692867 0.03775502853871869 0.3028607352579818 0.5018965687436239 0.013248988047489581 0.007160762367985353 1.321011188541668e-10 9.879093504034731 -0.08976042139286988 SGTSSPQS(ph)PVFR ddPTM_A549_PD325901_60min_R1 2 SGTSSPQSPVFR 12 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SGT(0.001)S(0.002)S(0.018)PQS(0.979)PVFR;SGT(0.001)S(0.002)S(0.038)PQS(0.959)PVFR 187.1 2.3577e-19 1340480000.0 25149.0 27960.0 26244.0 26235.0 31962.0 28262.0 27108.0 29130.0 30116.0 30447.0 32697.0 True False 27702.107966284708 30316.287325628546 28025.075657992278 27855.476365992003 29717.099382914057 28031.843642236232 28139.609774066772 28548.97929795709 28850.32925121109 28524.571223882478 28675.476283360305 0.9660557227556698 1.0572200100899585 0.9773185763702401 0.9714041395767808 1.0363245265487773 0.9775545963120564 0.9813127250617112 0.9955886701182146 1.0060976482525679 0.9947374872526391 1.0 14.807529828334072 -8.7464642100329 23.147903210175553 1.0028794447977194 0.996315714228132 0.0031985267684111474 0.026747507363756664 486.43421606088936 751896.9736943074 0.004204817751246183 0.004756018718511738 1.7928162912729545e-09 8.7464642100329 -0.006563730569587367 SGTT(ph)PKPVINS(ph)TPGRT(ph)PLRDK ddPTM_A549_MK2206_60min_R1 1 SGTTPKPVINSTPGRTPLRDK 21 3 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 3 S(0.297)GT(0.342)T(0.368)PKPVINS(0.546)T(0.546)PGRT(0.9)PLRDK 43.93600000000001 0.011116 7943500.0 2397.4 3457.2 3079.3 2673.5 3792.6 3035.6 3126.8 2572.9 4368.3 4301.4 4195.8 True False 2802.0225091974535 3633.1567131048773 3515.9910430870827 3328.5076200179747 3234.71356402684 3356.8251771318014 3694.899086045227 2937.616454175788 3378.887024741684 3329.710752547958 3153.867061811052 0.8884402716671393 1.151968881979002 1.1148190377650502 1.0553734684386598 1.025634086862673 1.064352146537275 1.1715456021546757 0.9314331887181428 1.0713473201376529 1.0557549469557956 1.0 11.62290613524456 -11.520478279384392 0.4583467282445882 0.9625114725687282 1.0610656500668028 0.0 0.0821173628655724 7.555693171449988 1.2814771712891262 0.38211729663266814 0.018426333765277744 3.0166277416992326e-12 11.520478279384392 0.0985541774980746 SGTT(ph)PKPVINSTPGR ddPTM_A549_PD325901_60min_R1 1 SGTTPKPVINSTPGR 15 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 S(0.03)GT(0.025)T(0.946)PKPVINSTPGR 73.887 0.0012966 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGTT(ph)PKPVINSTPGRT(ph)PLRDK ddPTM_A549_PD325901_60min_R1 2 SGTTPKPVINSTPGRTPLRDK 21 3 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 2 S(0.301)GT(0.337)T(0.358)PKPVINS(0.174)T(0.164)PGRT(0.666)PLRDK;S(0.296)GT(0.338)T(0.363)PKPVINS(0.146)T(0.135)PGRT(0.722)PLRDK 53.25899999999999 0.0067417 7713000.0 2873.2 2960.8999999999996 3263.8 3156.3999999999996 3809.6000000000004 3576.8 3497.8999999999996 3038.2 3196.8 3561.6000000000004 3007.4 True False 3164.885148861954 3210.425434279453 3485.3010948237784 3351.363659295491 3542.0268384065284 3547.6717266842606 3631.014498624324 2977.6007175782097 3062.449613171457 3336.7199681735406 2637.508865479335 1.1999524211217296 1.217218822009911 1.3214367316222717 1.2706549362390187 1.3429440502611576 1.3450842850681812 1.3766833340916302 1.128944344623868 1.161114433871256 1.2651028445233805 1.0 11.36496022783227 -9.244261844280087 0.719540885568685 1.027685491306199 1.292552861613391 0.1863583518515214 0.09684280289714704 0.23660801783690147 0.26729636527184686 0.02353329085841898 0.01756878510089797 5.698206131680523e-10 9.244261844280087 0.264867370307192 SGTTPKPVINST(ph)PGR ddPTM_A549_MK2206_60min_R1 2 SGTTPKPVINSTPGR 15 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 SGTTPKPVINS(0.095)T(0.905)PGR;SGTTPKPVINS(0.129)T(0.871)PGR 72.819 0.00038973 7894800.0 2333.6000000000004 2940.8 2800.3 2721.9 3715.9 2989.7 3136.3 2842.3 4544.8 4338.3 4456.1 True False 2727.454628957696 3090.4741588276115 3197.4246477955235 3388.7656221907364 3169.2960324229643 3306.0680695977576 3706.1251130752335 3245.204729178685 3515.410056554267 3358.2750169197952 3349.527387896526 0.8142804381338449 0.9226597668659167 0.9545897905923613 1.0117145584287495 0.9461920042436957 0.9870252387080614 1.1064621016288056 0.9688545138950618 1.0495242013118495 1.0026116009843296 1.0 11.709741832997118 -3.8895888865208006 0.5500872239791883 1.0225722791230265 1.2677535504110213e-19 0.6924544430289362 0.0393679166324721 5.490930144158344 0.3552895132050949 0.006821280460978293 5.0798762251505565 0.00012894696167189954 3.8895888865208006 -1.0225722791230265 SGVAEAPVGSKAPS(ph)IDGKEELDLAEK ddPTM_A549_PD325901_60min_R1 2 SGVAEAPVGSKAPSIDGKEELDLAEK 26 2 H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;Q9H0E9-2;H7C128;B5MCW3;Q9H0E9;H0YAH7 H7C179 BRD8 Bromodomain-containing protein 8 1 SGVAEAPVGS(0.111)KAPS(0.889)IDGKEELDLAEK;SGVAEAPVGS(0.004)KAPS(0.996)IDGKEELDLAEK 117.94 9.142300000000001e-18 27613000.0 4592.5 4346.9 5083.0 5391.1 6337.9 5971.6 6310.6 7109.299999999999 5950.6 6211.7 6505.299999999999 True False 5058.7272191801885 4713.228518446879 5427.962946562063 5724.096002923555 5892.747768568017 5922.969269477673 6550.753336292826 6967.499434362039 5700.516975768918 5819.492201904648 5705.18934049435 0.8866887525141898 0.8261300786274135 0.9514080291841347 1.0033139412736065 1.0328750575800199 1.0381722526608472 1.1482096290471595 1.2212564769600285 0.9991810324869906 1.0200348936009884 1.0 12.478059051291634 -6.057783669522192 2.1424992719682705 1.0323163222532195 0.8547849354935715 0.5362505063053304 0.07048129877601475 0.23862687857853962 2.1048074952260474 0.011545371090204593 0.04412483973048067 8.754197301320229e-07 6.057783669522192 -0.17753138675964797 SGVDS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SGVDSPR 7 0 O43516-2;O43516;O43516-3;O43516-4 O43516-2 WIPF1 WAS/WASL-interacting protein family member 1 1 S(0.003)GVDS(0.997)PR 60.118 0.029024 6773200.0 1041.1 1261.0 753.28 728.53 1134.7 888.14 809.53 1049.6 1223.9 1498.4 1701.1 True False 1216.81222754879 1325.179513833521 860.10643098647 907.0198827049544 967.7871331280004 982.1223853003817 956.611122273952 1198.3840142651902 946.6886041666892 1159.910399316004 1278.6699220284056 0.9516234069371958 1.0363734150650352 0.6726571229751369 0.7093463817981361 0.7568701792818906 0.768081244722173 0.7481298385094108 0.9372113894445452 0.7403698076082988 0.9071226118121176 1.0 10.320428177254424 -10.917919863605812 1.0627782719581145 1.0048407759872167 0.8055807432970187 0.17203979575406347 0.111808999322603 0.5805550384355069 1.116567037735567 0.08978523057308124 0.01920544440729312 1.2080367225254594e-11 10.917919863605812 -0.19926003269019799 SGVDS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SGVDSPR 7 0 O43516-2;O43516;O43516-3;O43516-4 O43516-2 WIPF1 WAS/WASL-interacting protein family member 1 1 S(0.002)GVDS(0.998)PR 66.351 0.024338 12162000.0 1436.9 1479.7 1195.3 1454.9 1425.1 1550.6 1388.1 1054.3 1444.9 1473.1 1494.2 True False 1582.7730302101281 1604.399512007602 1276.4202459228093 1544.7658686823627 1325.0058923281035 1537.972427699792 1440.9249050974647 1033.2711594176499 1384.1758777751006 1380.0882145991807 1310.422872514205 1.2078337942723683 1.2243372316368129 0.974052172543236 1.1788300563760326 1.0111284838808707 1.1736458970294112 1.0995877249401758 0.7885020790542171 1.0562818360453305 1.0531624894117686 1.0 10.355816728205749 -8.023468940305293 24.953721326003162 1.0063492658362045 1.123794378656829 0.32757593396046125 0.09999289517561387 796.1426667322306 846509.8395219574 0.015403295672493189 0.019954737773562464 9.473949374841877e-09 8.023468940305293 0.11744511282062442 SGVGLSSYLSTEKDAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SGVGLSSYLSTEKDASPK 18 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 S(0.002)GVGLS(0.001)S(0.001)Y(0.001)LS(0.004)T(0.004)EKDAS(0.988)PK 51.503 0.0044648000000000005 8344500.0 2121.1 2360.5 2259.5 2820.0 3744.6 3035.4 2990.8 3013.7 3974.4 4074.7 4162.0 True False 2479.0898240838915 2480.6393674893156 2579.931075846869 3510.9001265946094 3193.774300441627 3356.6040132645503 3534.189646457742 3440.901204069169 3074.204745812637 3154.2224399979464 3128.4605346435974 0.7924312282770465 0.7929265336799004 0.8246647343885327 1.1222452985153546 1.0208772861523312 1.0729251579473555 1.1296897011553213 1.0998704206000687 0.9826573523206866 1.0082346908548372 1.0 11.61123718929608 -6.1603166429874445 6.19323482287161 1.0239120441809664 0.7976862059882419 0.8036029733103173 0.053851505254605546 0.09696397210243768 5.010996298033192 0.008885599393314722 0.02388663464166705 6.913267425792298e-07 6.1603166429874445 -0.22622583819272446 SGVGLSSYLSTEKDAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SGVGLSSYLSTEKDASPK 18 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 SGVGLSSYLSTEKDAS(1)PK;SGVGLS(0.001)S(0.001)YLS(0.004)T(0.004)EKDAS(0.99)PK 101.6 2.0731e-09 56445000.0 9717.6 9593.2 10521.400000000001 10069.2 13885.2 11734.0 11032.4 13074.4 11168.8 11697.400000000001 12123.4 True False 10704.12359828098 10401.652631338331 11235.445474317943 10691.151615187606 12909.951453339543 11638.442194395298 11452.244019160926 12813.620835331623 10699.414176548224 10958.824167709232 10632.298656564519 1.0067553540430427 0.9783070403986646 1.0567277911612305 1.005535299611505 1.214220167279516 1.0946308573837487 1.0771183531503004 1.205159979908985 1.0063124186172354 1.0307107166278773 1.0 13.376165914510658 -8.947324468799916 24.999986562315172 1.0027841681810876 1.0797930471970403 0.14616793859048016 0.07165739841330086 118.2415497343981 56117.85356112959 0.0125691781322966 0.013379871946072956 1.128952140152155e-09 8.947324468799916 0.07700887901595266 SGVGNIFIK ddPTM_A549_MK2206_60min_R1 1 SGVGNIFIK 9 0 P11940-2;E7EQV3;A0A087WTT1;P11940;Q4VXU2-2;Q4VXU2;E5RH24;E5RGH3;E5RJB9;Q96DU9;Q96DU9-2 P11940-2 PABPC1;PABPC1L;PABPC5 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 5 0 87.30799999999999 0.00087434 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGVGTGPPS(ph)PIALPPLR ddPTM_A549_MK2206_60min_R1 2 SGVGTGPPSPIALPPLR 17 0 Q92630 Q92630 DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2 1 SGVGTGPPS(1)PIALPPLR;SGVGT(0.001)GPPS(0.999)PIALPPLR 101.36 1.6720999999999998e-08 6071400.0 1646.4 1587.16 1833.51 1527.61 2327.7 1784.56 1609.88 1544.72 2832.6 2284.5 3202.1 True False 1924.2720693846197 1667.9396646915236 2093.5292882832455 1901.8745185770179 1985.2984134855442 1973.400954704944 1902.3743573757488 1763.688790506596 2191.02062273271 1768.4298633458432 2406.9301965358613 0.7994714895156079 0.6929738415730049 0.8697922737004699 0.7901660469066625 0.8248259198969939 0.8198829187257413 0.790373713418741 0.7327544409243604 0.9102967031973357 0.7347242000997909 1.0 11.232978587433445 -9.0463478688132 2.1633177719518177 0.9676890137932163 0.7918595983728844 0.0 0.08518350407013393 0.11086699280873293 1.0564905536940365 0.00978540816510309 0.009621115761989403 8.987773746572377e-10 9.0463478688132 -0.1758294154203318 SGVGTGPPS(ph)PIALPPLR ddPTM_A549_PD325901_60min_R1 2 SGVGTGPPSPIALPPLR 17 0 Q92630 Q92630 DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2 1 SGVGT(0.002)GPPS(0.998)PIALPPLR;SGVGT(0.002)GPPS(0.998)PIALPPLR 100.41 1.7869e-08 8539300.0 3680.2 4443.9 3580.5 4518.0 5174.200000000001 4535.7 3471.8 4418.6 5473.1 4353.0 5166.4 True False 4053.8111947799503 4818.403048868408 3823.4942612955883 4797.066598877525 4810.782042020958 4498.762763006544 3603.9212488418566 4330.467556675359 5243.084640217937 4078.150837112372 4530.965552507957 0.8946903585563799 1.063438464280831 0.8438586029812624 1.0587294348822134 1.0617564813217613 0.9928927313332612 0.795398068486094 0.9557493886216771 1.1571671820183693 0.9000622030452328 1.0 12.145602807202893 -8.732037249618312 24.91456279392182 1.0742178390086228 0.9605204369350383 0.0 0.10422207463906365 223.43883240675606 189335.87324782283 0.016582107412388105 0.018800905818129585 1.8533726520543074e-09 8.732037249618312 -0.11369740207358447 SGVRGT(ph)PVR ddPTM_A549_MK2206_60min_R1 2 SGVRGTPVR 9 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 SGVRGT(1)PVR;SGVRGT(1)PVR 77.597 0.00075242 775260000.0 3043.5 3698.2000000000003 3137.0 2801.8 4113.2 3177.2 2686.3 2716.8 4347.2 4176.200000000001 4690.7 True False 3557.168393569056 3886.4225837106487 3581.8737707154773 3488.241125777583 3508.15372872309 3513.409195145329 3174.365937969583 3101.914719851056 3362.5661410519074 3232.7935195031364 3525.8697332659112 1.0088768623547966 1.1022592658608428 1.015883751155404 0.989327850903478 0.9949754228366198 0.9964659675305019 0.9003072087491046 0.8797587416758706 0.9536841674344161 0.9168783205466565 1.0 11.783763458513901 -6.35291053414824 1.3320316650448027 0.9653131631329621 1.0560968707494816 0.44287171755839905 0.044492460925586494 0.3955914134597161 1.2979616203389661 0.007068962998891844 0.027739671330981236 4.4370003793944415e-07 6.35291053414824 0.09078370761651944 SGVRGT(ph)PVR ddPTM_A549_PD325901_60min_R1 3 SGVRGTPVR 9 1 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.001)GVRGT(0.999)PVR;S(0.001)GVRGT(0.999)PVR;S(0.004)GVRGT(0.996)PVR 84.169 0.0005444 562001000.0 15570.0 14605.099999999999 14474.2 15336.800000000001 16614.1 16456.8 16790.8 17520.1 17252.9 16616.7 17458.5 True False 17150.65493797181 15835.923033602909 15456.506252435298 16284.119303600019 15447.182931533456 16322.781277034659 17429.783082278318 17170.64786124743 16527.82061157591 15567.518726176231 15311.215178549895 1.1201367584461135 1.0342695108738396 1.009489192868829 1.0635419275155316 1.008880271839824 1.0660670029575385 1.1383670648621287 1.121442528304513 1.0794584504782094 1.0167395954297214 1.0 13.902301166795837 -10.67280318210826 1.0536484195782092 1.0018950763856682 1.0694146530818838 0.25108689834947295 0.0414692477271171 0.5577160876734587 1.1458412736385473 0.026083083135705072 0.0077276361230799485 2.12420691310822e-11 10.67280318210826 0.06751957669621556 SGVS(ph)SDNEDDDDEEDGNYLHPSLFASK ddPTM_A549_MK2206_60min_R1 1 SGVSSDNEDDDDEEDGNYLHPSLFASK 27 0 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 S(0.076)GVS(0.494)S(0.43)DNEDDDDEEDGNYLHPSLFASK 129.03 1.4514e-24 4266400.0 1016.2 984.84 982.59 1126.2 1533.0 857.3 1058.4 1141.7 1599.6 1537.7 1648.7 True False 1187.7097162953417 1034.9641494082514 1121.9360370950983 1402.1190505570394 1307.4977307528202 948.018916970317 1250.6975798484928 1303.5394713096098 1237.2931540363065 1190.3325020209684 1239.2822881948343 0.958385129529597 0.8351318817892595 0.905311120623966 1.1313960216436214 1.0550443133156933 0.7649741515722154 1.0092112118138041 1.0518503199205516 0.9983949305356206 0.9605015042656929 1.0 10.275289131859868 -6.032224438828901 24.48278702371094 0.9987297285882867 0.8901241810316516 0.18883330051027514 0.0891840992485337 524.1660908469813 398239.7992793772 0.011842718944664226 0.031366783308292664 9.28486430732607e-07 6.032224438828901 -0.1086055475566351 SGVSLAALK ddPTM_A549_MK2206_60min_R1 2 SGVSLAALK 9 0 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 0 ; 146.81 8.1427e-05 23012700.0 4566.9 5440.3 5032.0 4214.7 6016.9 5412.5 4522.9 5279.4 7472.200000000001 6685.700000000001 6387.1 False True 5337.681070014955 5717.188032599924 5745.613265616921 5247.301689205073 5131.821980539235 5985.247157473277 5344.652384634119 6027.771117484416 5779.758630651471 5175.395726579694 4801.006795007717 1.1117836941129293 1.1908310645477296 1.1967517462361112 1.0929586049870688 1.0689053774878037 1.2466650044521872 1.1132357467587228 1.255522304978268 1.2038638721906205 1.0779813375730445 1.0 12.229121262549242 -10.788372260926016 1.0418355106896717 1.000217595516703 1.1665402548292452 0.3538254136617729 0.06264264647021815 0.33334542633679304 0.6438294475020663 0.040308941283675175 0.01018902797497677 1.6279000596193356e-11 10.788372260926016 0.1663226593125422 SGVSLAALK ddPTM_A549_PD325901_60min_R1 2 SGVSLAALK 9 0 P10412;P16402;P16403 P10412;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 0 ; 146.81 8.1427e-05 43672000.0 9597.7 10174.9 10259.9 9962.8 11823.5 9675.2 10815.3 11109.1 10583.7 11136.4 10611.9 False True 10572.051438546696 11032.37453181465 10956.198511790704 10578.179528839528 10993.058148860659 9596.408379002334 11226.882159859248 10887.520285579643 10138.903894808165 10433.245803450087 9306.70357437658 1.1359609075391528 1.185422361811246 1.1772372918329053 1.1366193673518952 1.1811978388488689 1.0311286163044213 1.206322095695553 1.1698578555306525 1.0894194505907353 1.1210463210814114 1.0 13.184054541700839 -9.645108664061132 0.5475869559557727 0.9990669715314722 1.1584203160282134 0.17518732739997034 0.057320294482511025 0.3814806317642575 0.2483214738350903 0.025718536078630876 0.01227023644606321 2.2640777457922577e-10 9.645108664061132 0.1593533444967412 SGVSS(ph)DNEDDDDEEDGNYLHPSLFASK ddPTM_A549_MK2206_60min_R1 1 SGVSSDNEDDDDEEDGNYLHPSLFASK 27 0 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 S(0.018)GVS(0.143)S(0.643)DNEDDDDEEDGNY(0.197)LHPSLFASK 61.602 0.00019789 4041500.0 1068.1 1439.0 1051.2 962.79 1701.3 1331.9 1080.4 1043.7 1698.5 1863.1 1766.9 True False 1248.369167462167 1512.2389535340503 1200.275966775937 1198.6735932212857 1451.041023698482 1472.8407739563343 1276.6946950758809 1191.647671197198 1313.7924619471526 1442.2244160208531 1328.1299660407913 0.9399450350356944 1.1386227193127005 0.90373381932945 0.9025273308112909 1.092544450317685 1.108958318549902 0.9612724113753408 0.8972372445970386 0.9892047431650237 1.0859060881821543 1.0 10.375180615223528 SGVSS(ph)DNEDDDDEEDGNYLHPSLFASK ddPTM_A549_PD325901_60min_R1 2 SGVSSDNEDDDDEEDGNYLHPSLFASK 27 0 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 S(0.023)GVS(0.127)S(0.85)DNEDDDDEEDGNYLHPSLFASK;S(0.017)GVS(0.143)S(0.839)DNEDDDDEEDGNYLHPSLFASK 181.9 6.559299999999999e-58 16492500.0 3597.8 3950.0 4141.2 3941.6 3685.2 4298.0 3933.9 4418.8 4874.9 4756.4 4172.700000000001 True False 3963.046007439627 4282.880362526205 4422.246735058594 4185.0636799769045 3426.3642652498265 4262.99851299736 4083.60671721268 4330.6635675184625 4670.024905921401 4456.080092267695 3659.4843529246573 1.082952029641106 1.1703507788203358 1.2084343881739343 1.1436211434084163 0.9362970120398189 1.1649178140604357 1.115896755768081 1.1834081389246547 1.2761428812201698 1.2176797773998949 1.0 11.837424661617343 -11.142100760942865 1.534614818084568 1.0004894229121195 1.1594755067804474 0.0 0.10386666947708802 0.4144969737151692 1.7580860082316887 0.06584211998903552 0.014290248503574134 7.2094019397826625e-12 11.142100760942865 0.1589860838683279 SGVTNMSS(ph)PHK ddPTM_A549_MK2206_60min_R1 2 SGVTNMSSPHK 11 0 Q9NVG8 Q9NVG8 TBC1D13 TBC1 domain family member 13 1 SGVTNMS(0.067)S(0.933)PHK;S(0.003)GVT(0.022)NMS(0.134)S(0.841)PHK 75.102 0.00032922 20721900.0 6063.5 6596.200000000001 5975.0 5688.700000000001 7970.799999999999 5978.9 5823.3 6240.4 9589.400000000001 8671.0 9520.099999999999 True False 7086.870561657948 6931.918405351845 6822.344845401653 7082.431755375452 6798.305878854912 6611.583229527383 6881.318231983871 7124.9958104234875 7417.416211125134 6712.215077728962 7155.996428606563 0.9903401479251331 0.9686866776010463 0.953374545874406 0.9897198560724497 0.9500152699459492 0.9239220974310646 0.9616156604655854 0.9956678823847439 1.036531569729902 0.9379846880437843 1.0 12.804936952036133 -8.420397666600406 3.6107675740797607 1.017236048958399 0.9615888340404941 0.025402688563449627 0.030578468023409567 0.12895795466042098 3.108593174046662 0.003662025522980714 0.004425914258596178 3.798414309804825e-09 8.420397666600406 -0.05564721491790481 SGVTNMSS(ph)PHK ddPTM_A549_PD325901_60min_R1 4 SGVTNMSSPHK 11 0 Q9NVG8 Q9NVG8 TBC1D13 TBC1 domain family member 13 1 SGVTNMS(0.062)S(0.938)PHK;SGVTNMS(0.02)S(0.98)PHK;SGVTNMS(0.039)S(0.961)PHK;SGVTNMS(0.015)S(0.985)PHK 96.734 8.6402e-05 52549000.0 12796.900000000001 13355.599999999999 13923.9 14848.199999999999 16970.2 16125.8 14432.400000000001 16497.4 16509.5 14943.1 17353.3 True False 14096.031867420128 14481.123283482266 14868.859585212569 15765.33959129111 15778.271696011763 15994.476831291948 14981.63287971232 16168.346415040058 15815.663128332764 13999.590115794594 15218.954111632145 0.9262155443813485 0.9515189530937648 0.9769961507307527 1.0359016444659197 1.0367513812235047 1.0509576882860205 0.9844062062229075 1.0623822305030983 1.0392082801698272 0.9198785943571794 1.0 13.893581595827948 -5.938940949903963 2.211762993888849 1.024112290774629 0.9341166764463781 0.3723688785525713 0.03824019199810556 0.14005362544133215 1.3295417855148117 0.0033758549638562823 0.014484268408815911 1.1509568714611781e-06 5.938940949903963 -0.08999561432825087 SGYHDDS(ph)DEDLLE ddPTM_A549_MK2206_60min_R1 1 SGYHDDSDEDLLE 13 0 Q99523-2;Q99523 Q99523-2 SORT1 Sortilin 1 S(0.003)GYHDDS(0.997)DEDLLE 93.01100000000001 0.00017695 3372800.0 274.53 390.63 340.02 365.21 562.12 363.71 278.98 227.77 409.68 420.33 531.03 True False 320.86395238590865 410.5113984843681 388.23994884242194 454.6864663948998 479.4328926358611 402.1975507888418 329.66705482438834 260.0570950163702 316.88813412452754 325.3771610681369 399.1605953175851 0.803846762806381 1.028436682628334 0.9726409705685645 1.1391065945102536 1.2011027597912283 1.007608354899963 0.8259007995568665 0.6515099387740425 0.7938863150366862 0.815153511857192 1.0 8.640825496256895 -7.668162165249393 5.970826666622072 0.8723238324771339 1.0384145007519143 0.3725163553305447 0.12540067532636287 0.24336466799777706 12.864070898943764 0.022135651389014886 0.032889421845313065 2.1470286254795294e-08 7.668162165249393 0.16609066827478047 SGYHDDS(ph)DEDLLE ddPTM_A549_PD325901_60min_R1 2 SGYHDDSDEDLLE 13 0 Q99523-2;Q99523 Q99523-2 SORT1 Sortilin 1 S(0.004)GYHDDS(0.996)DEDLLE;SGYHDDS(1)DEDLLE 127.37 5.5816e-08 11070400.0 908.2 729.0899999999999 729.49 964.6200000000001 1183.84 964.5699999999999 846.29 994.26 833.5699999999999 852.63 756.1800000000001 True False 1000.3997954184966 790.5329730415775 778.9975781797289 1024.2023865890303 1100.691162426287 956.7148617221648 878.4960290576572 974.4287043181195 798.5379517177594 798.7947962892534 663.1746538199648 1.5085012517533278 1.1920434058931741 1.1746492024274606 1.544393140916202 1.659730443686554 1.4426288100900322 1.324682757396435 1.4693394850139316 1.204114100438076 1.204501395956707 1.0 9.37324505863038 -9.265723688702561 0.9445417401683874 1.0433671473100672 1.414341283155306 0.38429147034119315 0.14991641691101754 0.28005760365184645 0.527985204459414 0.04117232920706429 0.03316703814370553 5.42345837498165e-10 9.265723688702561 0.37097413584523875 SGYIS(ph)ESENS(ph)EISQQVR ddPTM_A549_PD325901_60min_R1 2 SGYISESENSEISQQVR 17 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 2 S(0.014)GY(0.001)IS(0.98)ES(0.186)ENS(0.804)EIS(0.015)QQVR;S(0.02)GY(0.014)IS(0.76)ES(0.422)ENS(0.757)EIS(0.027)QQVR 59.861999999999995 0.0044059 1867510.0 439.47 521.31 695.75 637.94 626.2 1091.69 874.29 500.83000000000004 784.03 891.17 756.81 True False 484.0846708792851 565.2426232376043 742.9677788846262 677.3441049331406 582.2178722727232 1082.7996385886659 907.5615843798453 490.8405527564657 751.0799456377688 834.9013741119761 663.727167813864 0.7293428600696396 0.8516189341764616 1.1193873249632966 1.020515865222343 0.87719457708864 1.6313926732201007 1.3673714568127522 0.7395215633151803 1.13160946554534 1.257898447734049 1.0 9.374446517897512 -5.624589356510337 3.385693724448719 1.0880878693115954 0.7471103342100477 0.2327861396014418 0.2306015401027085 0.27338166222653326 5.876933107738167 0.03088837635978125 0.15380089641831243 2.3736169984931253e-06 5.624589356510337 -0.3409775351015477 SGYIS(ph)ESENSEISQQVR ddPTM_A549_MK2206_60min_R1 2 SGYISESENSEISQQVR 17 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 SGYIS(0.971)ES(0.029)ENSEISQQVR;SGYIS(0.607)ES(0.392)ENSEISQQVR 250.08 5.9332e-86 47146000.0 4580.200000000001 4962.9 4958.5 4341.9 6048.9 4892.7 4619.9 3870.8 6322.8 7731.4 6963.200000000001 True False 5353.225784861174 5215.49041174019 5661.6898604057105 5405.665694915295 5159.114822929378 5410.442266488592 5459.276029045783 4419.497753827833 4890.695895436831 5984.871370309496 5234.0452654565825 1.0227702500379876 0.9964549688099089 1.0817044127935762 1.032789252051633 0.9856840285616696 1.0337018485866347 1.043031871557487 0.8443751495607873 0.9344007641115041 1.1434504416322462 1.0 12.353710685923723 SGYIS(ph)ESENSEISQQVR ddPTM_A549_PD325901_60min_R1 2 SGYISESENSEISQQVR 17 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 SGYIS(0.5)ES(0.5)ENS(0.001)EISQQVR;SGYIS(0.988)ES(0.012)ENSEISQQVR 274.81 1.4657999999999996e-101 43440000.0 8639.3 9866.7 9486.3 10093.8 9794.400000000001 9347.3 9983.1 9837.9 10163.2 10268.099999999999 11415.7 True False 9516.35537608348 10698.201436186659 10130.097363755993 10717.271101316954 9106.47513284568 9271.178687887443 10363.012333461938 9641.675366816751 9736.07604748003 9619.770413635086 10011.641270084601 0.9505290011258128 1.068576185220853 1.0118318356077485 1.0704809343639607 0.9095886365861298 0.9260398407991599 1.035096249845393 0.9630464283240621 0.9724755197304186 0.960858480055568 1.0 13.289390883005364 -6.739536897216586 24.999983996348796 0.9794241227554568 1.0274758225432774 0.2601999016514276 0.044328391489201015 286.0213962921734 326469.5559563862 0.006014571998480193 0.012511949593919866 1.8216423016438694e-07 6.739536897216586 0.048051699787820645 SGYLSSER ddPTM_A549_MK2206_60min_R1 1 SGYLSSER 8 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 64.757 0.025679 3941400.0 4518.6 4941.5 4393.2 4238.1 5889.0 4151.0 4169.5 4209.3 8224.7 7274.9 7915.1 False True 5281.22921083658 5193.001243146983 5016.221820053316 5276.434690255541 5022.7359011111275 4590.256064789203 4927.044179117814 4805.981165440611 6361.818582147041 5631.4950373625215 5949.562224353081 0.8876668587848627 0.8728375378428181 0.8431245242751872 0.886860997714713 0.8442194083712217 0.7715283732978051 0.8281355826400405 0.8077873605167958 1.0692918810238659 0.9465393965141454 1.0 12.538567801823788 -8.761089066826589 24.999997463729073 1.0327211729270394 0.8424396028645208 0.7229386865335106 0.04391690657876547 2.675767283669216 190953.70825989248 0.007102668629272897 0.007812675039188097 1.7334484588455431e-09 8.761089066826589 -0.19028157006251856 SGYMS(ph)DSDLMGK ddPTM_A549_MK2206_60min_R1 2 SGYMSDSDLMGK 12 0 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.095)GY(0.067)MS(0.825)DS(0.013)DLMGK;S(0.098)GY(0.159)MS(0.741)DS(0.002)DLMGK 61.235 0.0029328 8295000.0 4959.4 6218.0 4662.0 5220.9 7727.3 6363.799999999999 5023.0 4996.5 7800.7 7750.7 8727.6 True False 5796.425474311276 6534.469640774648 5323.141701968623 6500.02073437511 6590.624406292413 7037.213092051446 5935.614081234862 5704.769176139498 6033.853905158173 5999.811486905069 6560.296050493863 0.8835615694317511 0.9960632249641735 0.8114179087341484 0.9908121042625484 1.0046230163341894 1.0726974877180553 0.9047783873698849 0.8695902032820668 0.9197532944727306 0.9145641356312569 1.0 12.679545206356355 -6.101876118544605 0.006587558268181684 1.8672514518041192 2.2084391552847044e-07 0.0 0.07298567913922221 23519.58696537958 29.95592654212343 4085.7048504576833 4409.242055263877 7.90904199345208e-07 6.101876118544605 -1.8672512309602036 SGYMS(ph)DSDLMGK ddPTM_A549_PD325901_60min_R1 1 SGYMSDSDLMGK 12 0 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 S(0.003)GYMS(0.969)DS(0.028)DLMGK 60.49 0.001834 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SGYS(ph)SPGSPGTPGSR ddPTM_A549_MK2206_60min_R1 1 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 S(0.001)GYS(0.494)S(0.494)PGS(0.011)PGTPGSR 110.14 2.8823000000000003e-06 4692500.0 1519.7 2071.2 1906.6 1842.5 2673.8 1686.6 1337.2 1894.0 2452.9 2760.6 2798.3 True False 1776.1882069022163 2176.6152331895223 2176.9845493293374 2293.912582712968 2280.487561961442 1865.0748925255293 1580.1519310028393 2162.4803001317346 1897.3220664764046 2136.978542680033 2103.4048808489133 0.8444347653055575 1.0348056396593803 1.0349812198071577 1.0905711038319772 1.0841885852433033 0.8866932417561015 0.7512352687729362 1.0280856148146709 0.9020241817213357 1.0159615783612568 1.0 11.038510863391396 -7.265239743943599 24.974851785868402 0.9377874699342083 1.0237389941444983 0.17201248417666348 0.09407262967650573 469.3520346106754 3084442.7197121587 0.014068598791186139 0.023015203245177078 5.4295052331996986e-08 7.265239743943599 0.08595152421029006 SGYSS(ph)PGSPGTPGSR ddPTM_A549_PD325901_60min_R1 2 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SGYS(0.206)S(0.781)PGS(0.013)PGTPGSR;SGYS(0.012)S(0.965)PGS(0.023)PGTPGSR 124.62 2.208e-07 14175300.0 6405.1 6465.4 6895.4 6244.7 8155.6 7541.8 7140.9 6787.799999999999 7357.799999999999 7386.7 8137.700000000001 True False 7055.341036814596 7010.261948323277 7363.363309408629 6630.420936257298 7582.778791292596 7480.382081275823 7412.65085715042 6652.412004073914 7048.57725343874 6920.302501377892 7136.814489130537 0.9885840591148857 0.982267643218133 1.0317436890959024 0.9290448765840161 1.0624878652571492 1.0481401881285473 1.0386497881428731 0.9321262328179646 0.9876363276884689 0.9696626571865647 1.0 12.80106455692354 SGYSSPGS(ph)PGTPGSR ddPTM_A549_MK2206_60min_R1 2 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SGYSSPGS(1)PGTPGSR;SGYSSPGS(1)PGTPGSR 263.53 1.9078999999999996e-90 79515000.0 11456.8 12069.6 10685.0 10419.8 15104.599999999999 12183.5 11131.9 11170.6 18107.3 20157.6 17417.6 True False 13390.427748132719 12683.891086570238 12200.293669140861 12972.651467762598 12882.733348942631 13472.749883247237 13154.422136352463 12754.066758527753 14006.025461416364 15603.984159938784 13092.32921869494 1.0227689454227988 0.9688032491925516 0.9318657868547704 0.990858941221746 0.9839909410883878 1.029056759740588 1.0047426944908213 0.9741633093304611 1.0697886699500903 1.1918417188636972 1.0 13.676434165398478 -7.418230372693477 0.967433501712833 1.0291445595411923 0.9738132470065123 0.21656483659559278 0.057930342165013186 0.5096547809665448 0.9494243444839582 0.006345643760981642 0.013360470369092645 3.817417211851932e-08 7.418230372693477 -0.055331312534680044 SGYSSPGS(ph)PGTPGSR ddPTM_A549_PD325901_60min_R1 2 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SGYSSPGS(0.999)PGTPGSR;SGYSS(0.004)PGS(0.996)PGTPGSR 198.87 1.6027e-38 99924000.0 10485.7 11200.3 10496.0 10806.8 11145.9 10923.5 10715.3 11242.8 11470.2 12005.0 12840.2 True False 11550.20054483564 12144.188588456265 11208.321677575337 11474.311491976465 10363.050435267565 10834.542637674886 11123.076605137143 11018.553534194021 10988.147382694959 11247.00225121388 11260.936800734107 1.0256873605828847 1.078435018626921 0.9953276424430922 1.01894821852019 0.9202653934255267 0.9621351073534642 0.9877576619035836 0.9784757457723868 0.9757756017224637 0.9987625763498363 1.0 13.4590392301963 -5.885034335989277 5.336911875328463 0.9831983616451955 1.0515689183460328 0.5124963842776348 0.026524863154538655 0.11914365569930933 5.05324419993468 0.003626192465521678 0.011774693560114161 1.3030637521565074e-06 5.885034335989277 0.06837055670083736 SHDDGNIDLES(ph)DSFLK ddPTM_A549_MK2206_60min_R1 2 SHDDGNIDLESDSFLK 16 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 SHDDGNIDLES(0.97)DS(0.03)FLK;SHDDGNIDLES(0.961)DS(0.039)FLK 125.73 6.556300000000001e-09 5786100.0 1057.97 1229.22 1081.84 460.97 1347.15 1212.53 1030.24 1416.2800000000002 1901.8 1398.21 1446.1100000000001 True False 1236.5294711168895 1291.782047576876 1235.2611795061634 573.9076706937295 1148.9860195588135 1340.8391197877272 1217.4212723574374 1617.0420271755938 1471.0453365505432 1082.3533899009813 1087.0009763943904 1.1375605891528164 1.1883908806243668 1.13639380859027 0.5279734638301758 1.0570239075313705 1.233521541291825 1.119981765237833 1.4876178239870244 1.3533063617201502 0.9957243952909544 1.0 10.086137520923089 -7.139566696045231 5.510710554612581 1.197319393205277 0.9956552185632138 0.16722525790178777 0.21159690198542164 0.35581699973053466 14.71381122123291 0.03388169976653486 0.05931257043929407 7.251591044486131e-08 7.139566696045231 -0.2016641746420632 SHDDGNIDLES(ph)DSFLK ddPTM_A549_PD325901_60min_R1 2 SHDDGNIDLESDSFLK 16 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 SHDDGNIDLES(0.844)DS(0.156)FLK;SHDDGNIDLES(0.794)DS(0.206)FLK 103.17 3.3048000000000003e-07 11558900.0 1620.3899999999999 1445.3400000000001 1561.33 1600.2800000000002 1696.07 1427.62 1363.37 1526.28 1575.88 1680.56 1899.1999999999998 True False 1784.8907999319285 1567.1438742211712 1667.291242840005 1699.1256611004278 1576.9438943238554 1415.9939360459016 1415.2537914146897 1495.8371480565022 1509.651243870319 1574.4491547938355 1665.6104400207323 1.071613600062276 0.9408825956936633 1.001009121207989 1.0201218846102322 0.9467663364935601 0.8501351228491797 0.8496907544582115 0.89807142901787 0.9063651425308836 0.9452685435702708 1.0 10.701835301230819 -2.000022420744699 0.6616452074422895 0.9383959723936391 12.556046913270787 0.35432575039394254 0.05391592233176566 248.21094702278484 1.4151836195252554 0.010609549221496518 4243.397759590233 0.009999483756600643 2.000022420744699 11.617650940877148 SHDDGNIDLESDS(ph)FLK ddPTM_A549_MK2206_60min_R1 2 SHDDGNIDLESDSFLK 16 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 SHDDGNIDLES(0.148)DS(0.852)FLK;SHDDGNIDLES(0.022)DS(0.978)FLK 110.77 1.3615e-07 9276700.0 971.89 789.73 840.42 449.21000000000004 1533.33 1738.4 1368.62 1675.22 1907.71 1260.27 1381.17 True False 1135.9212715708325 829.9238837904413 959.6041933008302 559.2664701658033 1307.7791881899682 1922.3563341434726 1617.2805382957724 1912.6875651460864 1475.6167309868733 975.5741317044716 1038.1873706472115 1.0941389807725104 0.7993970137327546 0.9243073268196355 0.5386951199542657 1.2596754932346093 1.851646811061731 1.5577925372830832 1.842333685829473 1.4213395122182675 0.9396898472154342 1.0 10.019851127499207 -6.897499045148326 7.760742689954223 1.3367544088224448 0.8442076982227767 0.4407701275377294 0.3033885231606665 0.22193859090984178 15.070508767066901 0.04940597040367491 0.09369493150298895 1.2661960514010023e-07 6.897499045148326 -0.49254671059966804 SHDDGNIDLESDS(ph)FLK ddPTM_A549_PD325901_60min_R1 2 SHDDGNIDLESDSFLK 16 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 SHDDGNIDLES(0.064)DS(0.936)FLK;SHDDGNIDLES(0.067)DS(0.933)FLK 119.38 3.5725e-08 6065200.0 1576.02 1841.4499999999998 1487.03 1694.32 2063.77 1510.46 1684.03 1559.04 1678.05 1992.02 2218.2 True False 1736.016390195397 1996.6354540693378 1587.9487980378087 1798.974298320091 1918.817914819991 1498.1593145514178 1748.1166831865748 1527.9437241567798 1607.5273940760644 1866.2435172397397 1945.3754623283419 0.892381148941618 1.0263496650048443 0.8162685449611133 0.9247440060578181 0.9863483692363606 0.7701131959166027 0.8986011785582636 0.7854235615411974 0.8263327183905566 0.9593230475962248 1.0 10.925832910497311 -4.320217230755051 16.465678567966126 0.9026859224290031 0.8987347555882419 0.0 0.08538847932091873 0.0 0.0 0.011997134112527424 0.0 4.7839074510152274e-05 4.320217230755051 -0.003951166840761244 SHELDIDENPASDFDDSGS(ph)LLGFK ddPTM_A549_PD325901_60min_R1 2 SHELDIDENPASDFDDSGSLLGFK 24 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 SHELDIDENPAS(0.007)DFDDS(0.165)GS(0.828)LLGFK;SHELDIDENPASDFDDS(0.047)GS(0.953)LLGFK 148.85 1.7097999999999998e-28 9382100.0 2199.19 2257.2 2200.95 2145.3999999999996 2057.2 2634.8999999999996 2670.7 2484.2 2428.7 2369.94 2837.1000000000004 True False 2422.45014984189 2447.4221656440877 2350.319702387523 2277.91648544308 1912.7093689547207 2613.4422479983095 2772.3349499631154 2434.6506821828016 2326.6301850317577 2220.3015839435093 2488.1546858586894 0.9735930662228405 0.9836294260778468 0.944603531181343 0.9155043689162542 0.7687260682888869 1.0503536065710408 1.1142132624308092 0.9784965123028824 0.935082612932006 0.8923486938181494 1.0 11.280860463693358 SHFQNS(ph)R ddPTM_A549_PD325901_60min_R1 2 SHFQNSR 7 0 Q96AQ6-3;Q96AQ6-2;Q96AQ6 Q96AQ6-3 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 1 SHFQNS(1)R;SHFQNS(1)R 43.083 0.045903 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SHGS(ph)PTHVR ddPTM_A549_MK2206_60min_R1 2 SHGSPTHVR 9 0 Q5VT52-5 Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 SHGS(0.993)PT(0.007)HVR;S(0.038)HGS(0.938)PT(0.024)HVR 97.734 0.00026268 11064900.0 629.44 758.6700000000001 813.9100000000001 223.335 685.02 213.81 622.21 341.78 894.8 1143.31 1122.4499999999998 True False 735.6740836694942 797.2830624584279 929.3346766729478 278.05208502588926 584.2544654405068 236.43523228440856 735.2575029833057 390.22836165735174 692.1292287019797 885.0354769367198 843.7146869559595 0.8719465182284959 0.9449676232790822 1.1014797905508755 0.3295570046659661 0.6924787187816299 0.2802312629372897 0.8714527723062915 0.46251223036694755 0.8203356411859022 1.048974837844582 1.0 9.720611405172633 -9.503508609586488 1.2817578505417186 0.95745576939864 0.6980965599588803 0.18922090480590736 0.247141197093687 0.5108140366547391 1.7280254053179538 0.06207330103656481 0.04796803878679889 3.1368329440073824e-10 9.503508609586488 -0.25935920943975965 SHGS(ph)PTHVR ddPTM_A549_PD325901_60min_R1 4 SHGSPTHVR 9 0 Q5VT52-5 Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.001)HGS(0.997)PT(0.002)HVR;S(0.001)HGS(0.986)PT(0.013)HVR;S(0.001)HGS(0.991)PT(0.008)HVR;S(0.001)HGS(0.975)PT(0.023)HVR 102.53 0.00021164 34238000.0 1762.23 1742.61 1538.93 1585.41 1930.9299999999998 1652.73 1152.0900000000001 1595.46 1598.34 1515.6000000000001 2076.16 True False 1941.1302923148407 1889.4658603903265 1643.371044137864 1683.3371749726462 1795.3081381468705 1639.2707148408842 1195.9334153978386 1563.6372986858428 1531.1673281770738 1419.9047573460855 1820.8054818625963 1.0660832865733456 1.0377087938341958 0.9025516786432203 0.9245013768580449 0.9859966679748552 0.900299747100931 0.6568155837132347 0.8587613088062088 0.8409285579537927 0.7798223212144503 1.0 10.830361090918823 -5.725440215951923 4.3158448874714885 0.9022203684787473 1.0590318278282953 0.3144706658148213 0.09442296290208559 0.21251379733166095 8.580060677744443 0.013897984980995082 0.05632101507551473 1.8817407247872788e-06 5.725440215951923 0.156811459349548 SHHANS(ph)PTAGAAK ddPTM_A549_MK2206_60min_R1 1 SHHANSPTAGAAK 13 0 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 S(0.017)HHANS(0.954)PT(0.029)AGAAK 47.18899999999999 0.010789 2084300.0 255.49 229.26 235.28 122.16 317.73 277.4 232.36 291.2 148.84 367.93 255.55 True False 298.6104658692159 240.92835475136638 268.6462418788454 152.08920548397083 270.9923378943858 306.75428387678295 274.57680428344275 332.4784917625985 115.12797764863959 284.8143574615174 192.0898821788014 1.5545351086803356 1.254248021908333 1.398544466953151 0.7917606266341656 1.4107579994355992 1.5969309804211835 1.4294183596190702 1.7308485381500747 0.5993443087308263 1.4827139994620124 1.0 7.585637720673593 -8.770170569426433 24.99999976004804 0.8108014695524018 1.3794264357824317 0.12260013890142141 0.31598521576974986 115.00527686548142 329293.3968506069 0.04619318489206195 0.049542117732450944 1.6975767971791467e-09 8.770170569426433 0.5686249662300299 SHHANS(ph)PTAGAAK ddPTM_A549_PD325901_60min_R1 2 SHHANSPTAGAAK 13 0 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 S(0.004)HHANS(0.973)PT(0.023)AGAAK;SHHANS(0.73)PT(0.27)AGAAK 60.474 0.0024866999999999997 6085700.0 1098.55 1011.24 1091.04 975.3299999999999 1160.6799999999998 828.8399999999999 541.54 660.49 1049.47 946.86 1091.49 True False 1210.0739872902325 1096.4607437470888 1165.0845353564973 1035.5739189648555 1079.1578409286244 822.0902018410261 562.1486010420587 647.3160088056184 1005.3644255302336 887.0750980078614 957.2436495251842 1.2641232855297166 1.1454353803140502 1.2171243297716388 1.0818289778976595 1.1273596241290424 0.8588097735083461 0.5872575924853592 0.6762290970817123 1.050270143895881 0.9266972922179968 1.0 9.90274237386148 -7.109908885195148 4.745058955563643 0.9489157932185469 1.1702349496286262 0.4681981133432259 0.1497111904373657 0.25211017858368384 8.942498903439919 0.02659574671238709 0.04702584518797055 7.764099900413783e-08 7.109908885195148 0.22131915641007927 SHHAPMS(ph)PGSSGGGGQPLAR ddPTM_A549_MK2206_60min_R1 1 SHHAPMSPGSSGGGGQPLAR 20 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 S(0.006)HHAPMS(0.985)PGS(0.007)S(0.002)GGGGQPLAR 48.181999999999995 0.004089199999999999 5803800.0 725.43 629.66 617.14 719.17 341.66 261.45 143.84 273.29 477.17 1006.7 885.32 True False 847.8648489393134 661.7070045046904 704.6597318646318 895.3666822847678 291.40226659426537 289.11646546353603 169.97386610488212 312.0296944155236 369.0917568839114 779.2857708164854 665.4706104110211 1.2740830859767622 0.9943444445968754 1.0588893346160035 1.3454638991972219 0.43788900972543887 0.43445414559324597 0.25541904247266384 0.4688857622469633 0.554632693179261 1.1710295821105723 1.0 9.37823114268795 -6.758779344257951 24.99999921292426 0.6717709849417107 1.1479697303295997 0.4892517254730052 0.2667466014164728 57.52334823947421 540614.5694876636 0.04155466532243579 0.08351001010521313 1.7426920730846832e-07 6.758779344257951 0.476198745387889 SHIAQWS(ph)PHTPPR ddPTM_A549_MK2206_60min_R1 1 SHIAQWSPHTPPR 13 0 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 SHIAQWS(0.985)PHT(0.015)PPR 66.568 0.0058253 8699800.0 680.85 821.31 846.2 469.31 1057.2 920.87 525.82 1004.6 1400.2 1148.3 1185.9 True False 795.7608348156704 863.1111709013553 966.2038842140388 584.2909710681263 901.6872804643713 1018.3158521759664 621.3546876756755 1147.0051264584695 1083.0569356599372 888.8982324710141 891.4083008250458 0.892700723202994 0.9682557029169462 1.083907209883244 0.6554695200026003 1.0115311688592217 1.1423674776569401 0.6970483527027723 1.2867337284125078 1.2149953446221113 0.9971841541617815 1.0 9.799942585214152 -8.274225712952498 24.998352176000846 1.1182529283639546 0.9313604357119253 0.2751331085347608 0.15796488361588723 851.4613889131106 1664674.918281237 0.026037541198736826 0.031579426139931976 5.318317820691642e-09 8.274225712952498 -0.18689249265202934 SHIAQWS(ph)PHTPPR ddPTM_A549_PD325901_60min_R1 2 SHIAQWSPHTPPR 13 0 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 SHIAQWS(0.929)PHT(0.07)PPR;SHIAQWS(0.977)PHT(0.023)PPR 59.333 0.011536 23506000.0 2112.5 2027.4 1677.71 1876.1100000000001 2193.7 2322.3999999999996 2033.3200000000002 1816.01 1970.56 2360.5 2610.2 True False 2326.959444859694 2198.25611316092 1791.5694894897986 1991.993053745046 2039.6220798541583 2303.4871443892657 2110.699105275396 1779.7882559177147 1887.7442160069902 2211.4576271545498 2289.1619474210793 1.0165114999754372 0.9602885962862646 0.7826311683662845 0.8701844166111457 0.8909907322860896 1.0062578346561828 0.9220400975358097 0.7774846414526443 0.8246442407159889 0.9660555600471737 1.0 11.160603815042183 -11.024438509434836 1.3576693091405143 0.9991160411388159 0.8853653628612139 0.1518453521411508 0.07732078837764159 0.5478281551704368 1.8215642653802084 0.055737760248428914 0.012998187367576915 9.45282222884806e-12 11.024438509434836 -0.11375067827760199 SHIAS(ph)PSPCPDR ddPTM_A549_MK2206_60min_R1 3 SHIASPSPCPDR 12 0 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 SHIAS(0.673)PS(0.327)PCPDR;S(0.003)HIAS(0.992)PS(0.005)PCPDR;S(0.001)HIAS(0.976)PS(0.024)PCPDR 97.911 0.00025252 11990700.0 3501.49 3616.5 3257.08 2330.27 3836.1700000000005 2746.18 2571.48 3014.14 4965.8 4676.6 5170.3 True False 4092.455908788604 3800.564402679565 3718.982920344905 2901.1862546097937 3271.874474743671 3036.77894483325 3038.684630223735 3441.4035754166143 3841.054228753119 3620.1528119602435 3886.3718169792883 1.0530273739915847 0.9779209457199034 0.9569292634577389 0.7465024941604178 0.8418840576316138 0.7813917679121113 0.7818821186763276 0.885505488790692 0.9883393585687864 0.9314993475776167 1.0 11.924208217713806 -8.748900678032706 4.875453869840905 0.9949311630016329 0.8713828435822994 0.1708195147909839 0.08960388709936128 0.18954209229489646 11.671407555227457 0.01618443182882417 0.017845711141036922 1.7827864392413853e-09 8.748900678032706 -0.12354831941933342 SHILEDDENS(ph)VDISMLK ddPTM_A549_MK2206_60min_R1 9 SHILEDDENSVDISMLK 17 0 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 SHILEDDENS(0.999)VDIS(0.001)MLK;SHILEDDENS(0.998)VDIS(0.002)MLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(0.999)VDIS(0.001)MLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK 260.25 6.677499999999999e-87 517255500.0 40493.44 44339.4 41942.6 16448.33 55562.6 43485.5 41120.87 40063.6 61140.299999999996 59486.2 64916.799999999996 True False 47327.742702442905 46596.08607111027 47890.691366149505 20478.171588393605 47389.41514333117 48087.106746661295 48591.99980183722 45742.73798962924 47292.1196709965 46048.226105039845 48796.16694746551 0.9699069755498722 0.954912834060842 0.9814437149891129 0.4196676269765334 0.9711708543490954 0.9854689364931555 0.9958159183722751 0.9374248194305176 0.9691769380556411 0.943685313533251 1.0 15.574480204733685 -6.955355515023664 24.999962923452987 0.9818249031177623 0.8315620175790969 0.17685288065575777 0.1447887466733721 163.85100073079252 91752.35289374275 0.020108013250276908 0.03800056162170092 1.1082672123066525e-07 6.955355515023664 -0.1502628855386654 SHILEDDENS(ph)VDISMLK ddPTM_A549_PD325901_60min_R1 10 SHILEDDENSVDISMLK 17 0 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK 324.91 7.666399999999997e-173 806633000.0 64897.799999999996 60054.9 66131.3 63456.5 73882.6 67770.5 69355.09999999999 62445.6 74503.70000000001 72301.7 83007.90000000001 True False 71486.17688076466 65115.9371856899 70619.36769781214 67376.06388483215 68693.34105713305 67218.5995172376 71994.44628306704 61200.07352037451 71372.56858259582 67736.55832291472 72798.45453043227 0.9819738254317056 0.8944686752720717 0.9700668531128062 0.9255150307712458 0.9436098815589122 0.9233520127702423 0.9889556962087824 0.8406781972931963 0.9804132387557709 0.9304669825730778 1.0 16.15162020270765 -8.974730293553458 24.999905706196934 0.9913588424264509 0.9335287520680632 0.0762583722459339 0.043644141900457366 139.42723693248598 137939.9323633898 0.006240181972048225 0.006480058103764982 1.0599117493926861e-09 8.974730293553458 -0.05783009035838771 SHILEQHPHTLDLS(ph)PSEK ddPTM_A549_PD325901_60min_R1 1 SHILEQHPHTLDLSPSEK 18 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 S(0.001)HILEQHPHT(0.045)LDLS(0.925)PS(0.029)EK 51.827 0.018678999999999998 4573100.0 1975.1 1927.4 1444.3 1339.5 2350.1 2027.4 1582.0 1769.1 2291.8 2088.5 2108.4 True False 2175.6106980082277 2089.8287622108883 1542.3188832814453 1422.2378727747775 2185.037083404866 2010.8895265823287 1642.2038757036166 1733.8139126678982 2195.4836159491815 1956.6317535743608 1849.0801662487954 1.1765907923948264 1.1301991121620738 0.8341006038750215 0.7691596604272992 1.181688670555383 1.087508028741552 0.8881193501929848 0.9376629225250215 1.1873382539185038 1.0581649131761302 1.0 10.852592058318445 -8.745317832725194 24.982271771116654 1.0884653018179968 0.9968621046859322 0.06463851927157782 0.13639783476350553 502.48177833161077 778655.3236939667 0.02510076778149165 0.028418758913235486 1.7975549166304434e-09 8.745317832725194 -0.09160319713206466 SHIS(ph)EEMD ddPTM_A549_MK2206_60min_R1 1 SHISEEMD 8 0 J3KTL2 J3KTL2 SRSF1 1 S(0.006)HIS(0.994)EEMD 49.418 0.011862000000000001 2929400.0 1033.5 968.91 1128.9 1014.4 872.16 1004.3 659.61 905.49 1205.0 1386.7 1450.9 True False 1207.9295333509508 1018.2233804507828 1288.9949951420792 1262.9280455381456 743.8664193433657 1110.5743593996137 779.4525988698641 1033.8459804468243 932.0694239895911 1073.4435068950233 1090.601487197116 1.1075810436086713 0.9336346891178853 1.1819120093581033 1.158010566062875 0.6820698743544981 1.0183136300811662 0.7146997395658102 0.9479594449333135 0.8546379543136715 0.9842674152717421 1.0 10.090908312562226 -6.717129469793389 24.99999493506666 0.9067992362152272 1.0899259131581267 0.40867536341242716 0.11938463139512304 114.78626797106801 64762.714114725626 0.016474155291618352 0.034293554898043754 1.9180968415738983e-07 6.717129469793389 0.18312667694289952 SHIS(ph)EEMD ddPTM_A549_PD325901_60min_R1 4 SHISEEMD 8 0 J3KTL2 J3KTL2 SRSF1 1 S(0.009)HIS(0.991)EEMD;S(0.005)HIS(0.995)EEMD;SHIS(1)EEMD;S(0.01)HIS(0.99)EEMD 71.223 0.00221 18405800.0 2541.46 2307.19 2528.3399999999997 2708.51 2496.87 2576.13 2532.72 2578.65 2838.3900000000003 2850.41 3247.95 True False 2799.4671482760336 2501.624998384009 2699.928356543523 2875.8085112274844 2321.498464933878 2555.15085139318 2629.104045557564 2527.2168028382102 2719.1023390671085 2670.4346261459855 2848.4727404514215 0.9827958360003046 0.8782337857260152 0.9478512180234671 1.009596641171202 0.8149976062491546 0.8970248565511088 0.9229872584776457 0.8872181807987746 0.9545825383732439 0.9374969920627638 1.0 11.475972884515123 -9.381193582767315 1.171658144583104 0.9891163785237258 0.9168761967774236 0.09492475473550555 0.05279304616066627 0.39062320857034805 1.117030404368347 0.012368793652041604 0.009918008761629103 4.1572526347958255e-10 9.381193582767315 -0.0722401817463022 SHISDQS(ph)PLSSK ddPTM_A549_PD325901_60min_R1 2 SHISDQSPLSSK 12 0 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 S(0.003)HIS(0.003)DQS(0.994)PLSSK;SHIS(0.001)DQS(0.996)PLS(0.003)S(0.001)K 74.987 0.00071049 7604500.0 1602.2 1738.8 2132.4 2080.6 2029.8 1771.7 1988.5 2997.6 2072.1 2184.3 2397.3 True False 1764.854164522699 1885.3347783191298 2277.1174871628864 2209.1139366145594 1887.233850429852 1757.2718626052638 2064.173455648951 2937.810516428293 1985.016842921851 2046.38292522503 2102.447297736786 0.8394284919400858 0.8967334307730945 1.0830794615466115 1.050734512580932 0.8976366981761664 0.8358220748253277 0.9817955759799375 1.3973289697157913 0.9441458271313888 0.9733337560603268 1.0 11.037853921410406 -7.995114141998307 24.99086679766862 1.013469910121306 0.9398377397137118 0.13570712863103784 0.1385976601860245 357.1252857709485 1826658.0891645516 0.022765002642815637 0.03139364927145856 1.0113136241991567e-08 7.995114141998307 -0.07363217040759429 SHKEPPS(ph)PADVPEK ddPTM_A549_MK2206_60min_R1 2 SHKEPPSPADVPEK 14 1 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 S(0.009)HKEPPS(0.991)PADVPEK;S(0.038)HKEPPS(0.962)PADVPEK 60.56399999999999 0.0029309 11606100.0 3944.8999999999996 3634.2 3466.0 2315.8 4455.9 3293.6000000000004 3036.1000000000004 3130.2 4667.0 5567.7 5466.0 True False 4610.702676454928 3819.1652570767505 3957.5309178514044 2883.1711039602114 3800.4430126950383 3642.126565885262 3587.7200700850426 3573.915435835458 3609.931951667569 4309.952703064415 4108.641346074461 1.1221964362647896 0.9295445709141087 0.9632213144212667 0.7017334590946698 0.92498777395747 0.8864552194036301 0.8732132517511842 0.8698533492708245 0.8786193896229526 1.0489970625404659 1.0 12.004445684083953 -10.7682208548681 1.0188766986050257 0.9999585341656491 0.8991697186846024 0.17344134075543693 0.09516518815608745 0.8696284210998814 1.604073272996203 0.06267344490878558 0.01592303876765045 1.7052150033341943e-11 10.7682208548681 -0.10078881548104668 SHKEPPS(ph)PADVPEK ddPTM_A549_PD325901_60min_R1 2 SHKEPPSPADVPEK 14 1 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 S(0.005)HKEPPS(0.995)PADVPEK;S(0.007)HKEPPS(0.993)PADVPEK 95.76700000000001 2.0569000000000002e-05 22671000.0 5852.6 4769.3 6084.8 5216.6 5688.8 5085.799999999999 5298.1 5501.1 5867.2 5693.3 6940.8 True False 6446.751643543595 5171.225648859809 6497.751118874846 5538.81753424181 5289.238313294585 5044.382930991613 5499.722094731561 5391.376244970537 5620.621987737603 5333.82406637534 6087.125601356307 1.0590797801358258 0.8495349016139208 1.0674580326430336 0.909923319638365 0.8689221579584394 0.8286970339280736 0.9035006758372354 0.8857014949337096 0.9233622494146072 0.8762467567922174 1.0 12.571545419261186 -4.463192131981007 4.8164025144226486 0.9381798427665239 47.7073758890521 0.18871061377612353 0.07009794541638738 4806.136767363216 218.09316684771292 0.009891275853787341 2473832.437040093 3.441976239656904e-05 4.463192131981007 46.76919604628558 SHKNPENRKS(ph)WAS ddPTM_A549_MK2206_60min_R1 1 SHKNPENRKSWAS 13 3 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 SHKNPENRKS(0.887)WAS(0.112) 53.777 0.003714 6697100.0 934.9 1126.7 692.6 678.14 1437.5 779.72 850.02 720.0 1312.4 1415.9 1232.4 True False 1092.6882638895056 1184.0442174752013 790.8210945481484 844.2843304428616 1226.0456542447346 862.2294528637527 1004.4576311629023 822.0622049075229 1015.1434954721481 1096.0472066147431 926.3610674903339 1.179548992543242 1.2781670765622457 0.8536855901021555 0.9113987623963604 1.3235073204946923 0.9307703908581517 1.0843046695433185 0.8874101403404463 1.0958399819439093 1.1831749466588846 1.0 9.855430811712734 SHKNPENRKS(ph)WAS ddPTM_A549_PD325901_60min_R1 2 SHKNPENRKSWAS 13 3 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 SHKNPENRKS(0.948)WAS(0.052);SHKNPENRKS(0.939)WAS(0.061) 70.783 0.00076462 48678000.0 7985.0 6535.299999999999 6446.9 6142.200000000001 6271.4 6782.900000000001 5984.0 5585.6 8350.8 8012.0 11277.1 True False 8795.631321753683 7086.0526666373435 6884.425402359038 6521.58974405169 5830.918499155476 6727.662311263332 6211.724394570448 5474.190826181568 7999.844916689251 7506.120952663524 9890.08819142681 0.8893380070541884 0.7164802304573851 0.696093429007719 0.6594066319555075 0.5895719417557862 0.6802429039101172 0.6280757334353257 0.5535027312422605 0.8088749828969057 0.7589538947863155 1.0 13.271767670435839 -9.517494154946533 1.0526790888728927 0.9613397678487536 0.676322370027161 0.27620805651825087 0.1073617217456482 0.2041422267053811 0.4722267996956587 0.025863914923577473 0.01879530945882531 3.037426971589569e-10 9.517494154946533 -0.28501739782159263 SHKNPENRKSWAS(ph) ddPTM_A549_PD325901_60min_R1 1 SHKNPENRKSWAS 13 3 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 SHKNPENRKS(0.481)WAS(0.519) 43.532 0.020887 18824000.0 4769.4 4268.9 4319.7 4423.9 3677.4 4798.6 3491.8 3507.3 6128.2 5405.1 7296.4 True False 5253.58597695329 4628.655184705851 4612.86081846629 4697.154255594131 3419.1121103412843 4759.521792570761 3624.6823597862767 3437.3441500763765 5870.6530653895525 5063.821063559865 6398.989055690436 0.821002494492693 0.7233416316894185 0.7208733720780794 0.7340463024260196 0.5343206685594761 0.7437927696310492 0.5664460945691026 0.5371698748288444 0.9174344594587095 0.7913470423983232 1.0 12.643628283595774 -8.883261884319108 6.105867967694927 0.9639363440386851 0.6726706664750015 0.47780170211365713 0.10273079267274925 0.08783511638647487 4.369204469378635 0.01601209444558137 0.016967783631978147 1.3083927099673968e-09 8.883261884319108 -0.2912656775636836 SHLDS(ph)PEAR ddPTM_A549_MK2206_60min_R1 2 SHLDSPEAR 9 0 K7ER08;K7EP90;Q9BTD8-4;Q9BTD8-2;Q9BTD8-3;Q9BTD8 K7ER08 RBM42 RNA-binding protein 42 1 S(0.002)HLDS(0.998)PEAR;SHLDS(1)PEAR 103.08 0.00020462 40127000.0 749.52 554.51 504.09999999999997 402.57 1122.55 662.21 658.66 670.46 946.94 1038.07 1035.77 True False 876.0206519953605 582.7321904962936 575.5889600948907 501.1996680720539 957.4243820329928 732.2846226605777 778.3299961668636 765.4997581976362 732.4596019524505 803.5692660290742 778.5597232022579 1.1251810566211164 0.7484746168212822 0.7392996875402986 0.6437523713795427 1.2297378781618125 0.9405631974495826 0.9997049333165483 0.983225480826435 0.9407879448731368 1.0321228315330142 1.0 9.604663902249092 -6.744540254305775 24.999974973559066 0.9868725529584605 0.804135612166751 0.3282317456409176 0.13542687129516714 229.3458946590484 339284.4711182438 0.017992128205255593 0.03737712720938502 1.800776214623766e-07 6.744540254305775 -0.18273694079170955 SHLDS(ph)PEAR ddPTM_A549_PD325901_60min_R1 2 SHLDSPEAR 9 0 K7ER08;K7EP90;Q9BTD8-4;Q9BTD8-2;Q9BTD8-3;Q9BTD8 K7ER08 RBM42 RNA-binding protein 42 1 SHLDS(1)PEAR;SHLDS(1)PEAR 122.69 3.3841e-05 54633000.0 1223.15 1000.62 969.8199999999999 1013.12 1201.17 779.2 921.1899999999999 722.4 1017.75 1201.1 1184.42 True False 1347.3232875645617 1084.945759076195 1035.6378172014206 1075.698121437539 1116.803963011541 772.8544535429367 956.2463895445102 707.9911652881633 974.9775068209622 1125.2623410189922 1038.7438486569906 1.2970698111055374 1.0444786368448193 0.9970098196397641 1.0355759245441762 1.075148569549149 0.7440279473540788 0.920579593112255 0.6815839787677559 0.938612063100568 1.0832914606174204 1.0 10.020624218179169 -2.000000041559841 0.7129741631846811 0.9369621452892039 49.70945647130026 0.44861675122285816 0.11805551628667611 199.80958695097655 0.9357051022777209 0.018307122855241883 15590.524803769444 0.009999999043049344 2.000000041559841 48.772494326011056 SHLEPSGNPLPATPTTSAPSAPPAS(ph)SQGPDTAPRPSPPQEEAR ddPTM_A549_MK2206_60min_R1 1 SHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPSPPQEEAR 43 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 SHLEPSGNPLPATPT(0.001)T(0.001)S(0.002)APS(0.01)APPAS(0.276)S(0.276)QGPDT(0.228)APRPS(0.207)PPQEEAR 60.949 6.937399999999999e-05 6227600.0 434.46 474.18 624.06 110.91 819.63 649.05 490.95 236.19 792.47 707.03 860.11 True False 507.7862264728147 498.3137366134645 712.5610919198919 138.08295497893909 699.0635127572953 717.7320401954792 580.1492600402661 269.67065580153906 612.9768103145484 547.3114319463392 646.5209491716255 0.7854134148683521 0.7707619331623269 1.102146949503929 0.213578469740017 1.0812697000042946 1.1101450635359844 0.8973402343475487 0.4171104681867815 0.9481159289578218 0.8465486426195447 1.0 9.33655330811087 -8.971943900388244 24.999104810126777 0.9771102486099806 0.8023052646513565 0.041239312166650666 0.2671989452446983 346.95835894740344 309156.385120201 0.044577290099134505 0.04669823500912424 1.066733906754987e-09 8.971943900388244 -0.1748049839586241 SHLEPSGNPLPATPTTSAPSAPPASSQGPDT(ph)APRPSPPQEEAR ddPTM_A549_PD325901_60min_R1 2 SHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPSPPQEEAR 43 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 SHLEPSGNPLPAT(0.002)PT(0.006)T(0.006)S(0.006)APS(0.018)APPAS(0.083)S(0.083)QGPDT(0.422)APRPS(0.374)PPQEEAR;SHLEPSGNPLPATPTTSAPSAPPAS(0.138)S(0.138)QGPDT(0.586)APRPS(0.138)PPQEEAR 134.94 9.357799999999999e-31 27473000.0 1254.8 1481.3600000000001 1415.47 1178.0100000000002 1585.6100000000001 1192.06 1232.95 1611.08 1521.1399999999999 1529.07 1784.93 True False 1382.1863722650626 1606.1994060333718 1511.5323061125725 1250.773002245178 1474.2422236575428 1182.3522585862336 1279.8705869461285 1578.9457455321908 1457.2117757068413 1432.5242592472816 1565.3949256035212 0.8829633657667413 1.0260665725705729 0.9655916736345734 0.7990143457012652 0.9417701562365577 0.7553060504079444 0.8176023609203206 1.0086564864284617 0.9308908262526973 0.9151200350895397 1.0 10.612310958007257 -9.405512823074348 0.7928606474731461 0.9869115794042601 0.8957578100692559 0.06550361194249466 0.08309906064598084 0.7328293265268134 0.9927617588261456 0.027021060045798212 0.018844116980888902 3.930856384031446e-10 9.405512823074348 -0.09115376933500419 SHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPS(ph)PPQEEAR ddPTM_A549_MK2206_60min_R1 1 SHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPSPPQEEAR 43 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 SHLEPSGNPLPATPTTSAPSAPPAS(0.013)S(0.013)QGPDT(0.21)APRPS(0.762)PPQEEAR 76.809 2.9956e-07 7361600.0 317.29 426.3 115.65 288.61 204.22 262.35 308.07 0.0 404.44 270.87 534.82 True False 370.84079500428004 447.99684912547997 132.050909016017 359.3194629561952 174.17950852859812 290.1117028661644 364.04233127732925 0.0 312.83498575796665 209.6802788726149 402.00943371890634 0.9224678922922488 1.1143938712610635 0.32847713993783995 0.8938085348699532 0.4332721919416154 0.7216539676255875 0.905556687836026 0.0 0.7781782205059089 0.5215804936041075 1.0 8.651085546452046 -9.696073705133097 1.509287167029712 0.9488225329952139 0.6732228787751111 0.0 0.3287891786558177 0.5123768898394336 2.351939750977485 0.073801296995637 0.054124130834418464 2.0133825250046097e-10 9.696073705133097 -0.2755996542201028 SHLIVT(ph)SPPR ddPTM_A549_PD325901_60min_R1 2 SHLIVTSPPR 10 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 SHLIVT(0.601)S(0.399)PPR;SHLIVT(0.613)S(0.387)PPR 53.6 0.018569 6020000.0 930.74 950.59 1002.1200000000001 1406.74 1798.7200000000003 1560.44 1035.55 1250.3899999999999 1303.72 1012.4100000000001 1183.5900000000001 True False 1025.2280396254255 1030.6995553958957 1070.1298894370998 1493.6311348616587 1672.384112447131 1547.7322940022323 1074.9584219247035 1225.4499905380205 1248.929182208425 948.486259821028 1038.0159333951872 0.9876804455901419 0.9929515744759709 1.030937825719951 1.4389289092858388 1.6111353001846755 1.4910486864491983 1.0355895197183373 1.180569537627198 1.2031888355734324 0.9137492299551495 1.0 10.019612873689091 -10.300913177853925 0.6474063598584819 0.9951185166374003 1.231927568316704 0.18776969757956052 0.20474747141423935 1.3820683388545818 1.0401859410529366 0.1695382604825566 0.04863405527322419 5.0013450956359436e-11 10.300913177853925 0.23680905167930366 SHNVAAGS(ph)YEAPLPPGS(ph)FHGDFAYGTYR ddPTM_A549_PD325901_60min_R1 3 SHNVAAGSYEAPLPPGSFHGDFAYGTYR 28 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 2 S(0.002)HNVAAGS(0.979)Y(0.02)EAPLPPGS(0.989)FHGDFAYGT(0.01)YR;S(0.024)HNVAAGS(0.944)Y(0.039)EAPLPPGS(0.971)FHGDFAY(0.002)GT(0.018)Y(0.002)R;S(0.001)HNVAAGS(0.968)Y(0.067)EAPLPPGS(0.89)FHGDFAY(0.01)GT(0.052)Y(0.012)R 62.938 0.00028429 10014900.0 3785.6899999999996 3548.1 4320.280000000001 4126.1 4666.0 4468.599999999999 4034.5000000000005 3649.9399999999996 4230.41 4484.9 4765.700000000001 True False 4170.010461922316 3847.110839058035 4613.480180754116 4380.959825947001 4338.276256826136 4432.209203159609 4188.035105263113 3577.139083377462 4052.6205793470554 4201.72264860218 4179.549112261378 0.9977177800564471 0.920460732898656 1.103822459513571 1.0481895793722709 1.0379770976010563 1.0604515185997008 1.0020303608771675 0.8558672209122632 0.9696310464346604 1.0053052460313847 1.0 12.029131598118793 -8.001563317051275 24.995062252002793 0.9733061458613644 1.0282828906669157 0.23617902657355616 0.056675356509136465 86.08449247621803 1376395.3540646501 0.00908006846223171 0.012449525578835316 9.96406800509227e-09 8.001563317051275 0.05497674480555126 SHPEPQT(ph)PKDSPSKSSAEAQTPEDTPNKSGAEAK ddPTM_A549_PD325901_60min_R1 1 SHPEPQTPKDSPSKSSAEAQTPEDTPNKSGAEAK 34 3 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 S(0.004)HPEPQT(0.503)PKDS(0.298)PS(0.064)KS(0.064)S(0.064)AEAQT(0.001)PEDTPNKSGAEAK 84.58200000000001 8.1624e-07 4797200.0 1023.7 927.19 1037.5 1035.9 718.16 2154.0 1219.5 1689.6 1682.4 1243.7 1169.7 True False 1127.6252703918908 1005.3275552735882 1107.9109889943222 1099.885190300405 667.7189191175012 2136.458538156424 1265.9087398360064 1655.899602534441 1611.6945787035982 1165.1725697488305 1025.834315339222 1.0992274810177398 0.9800096762615582 1.080009678393298 1.0721859990974232 0.6509032785637517 2.0826545829186283 1.2340284594763207 1.6141979048408706 1.571106127572506 1.1358292000239163 1.0 10.002582021707704 SHPEPQTPKDSPS(ph)KSSAEAQTPEDTPNK ddPTM_A549_PD325901_60min_R1 1 SHPEPQTPKDSPSKSSAEAQTPEDTPNK 28 2 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 SHPEPQT(0.002)PKDS(0.06)PS(0.334)KS(0.334)S(0.267)AEAQT(0.004)PEDTPNK 103.5 3.3582999999999998e-15 42222000.0 1426.7 911.65 1522.7 1484.9 1418.7 2222.8 1537.4 1492.5 1858.3 1715.2 1466.8 True False 1571.5375337189707 988.4779449359532 1626.0395787389455 1576.6189005474187 1319.055406249302 2204.698253766991 1595.9065982975612 1462.7309166564005 1780.2021134123245 1606.901979282137 1286.3928988112941 1.2216621649351203 0.7684106044501392 1.2640302820712908 1.2256122542376526 1.025390770944235 1.7138607153415315 1.2406058831421385 1.1370794397326458 1.3838712224370489 1.2491533346981416 1.0 10.329115632300578 -5.800590902815003 24.990697186424924 1.2178661944491822 0.9950349181246056 0.17044237572976884 0.20692840616695227 203.42034883641452 129844.3814744638 0.03015235874067613 0.09374968522805847 1.5827382467692263e-06 5.800590902815003 -0.22283127632457655 SHPEPQTPKDSPSKS(ph)SAEAQTPEDTPNK ddPTM_A549_PD325901_60min_R1 1 SHPEPQTPKDSPSKSSAEAQTPEDTPNK 28 2 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 SHPEPQT(0.003)PKDS(0.084)PS(0.084)KS(0.415)S(0.415)AEAQTPEDTPNK 133.94 7.7281e-28 32892000.0 1211.7 1277.6 1505.9 1709.0 1485.6 1957.5 2044.5 1728.6 1723.6 1588.3 1946.6 True False 1334.7108919936054 1385.2678357375908 1608.0994297123384 1814.5610485793927 1381.256581041772 1941.558769007056 2122.304566293329 1694.1217169395336 1651.1630859804563 1488.0144669390256 1707.1805405140894 0.7818217583429572 0.8114360507649883 0.9419621367216883 1.0628993275854512 0.8090864136875818 1.1372896556227072 1.2431635178164764 0.9923506487658162 0.9671871526155258 0.8716210334092341 1.0 10.737399921312049 -5.827786151231147 2.8126849482358907 1.0060067630534462 0.7858506269788723 0.3519767978450006 0.1110450365719791 0.21024100965885362 3.2794901529144997 0.014643899222580388 0.06204302276269576 1.4866675045796326e-06 5.827786151231147 -0.22015613607457385 SHPLDLS(ph)PNVQSR ddPTM_A549_MK2206_60min_R1 3 SHPLDLSPNVQSR 13 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5;H0YBM4 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 SHPLDLS(1)PNVQSR;SHPLDLS(0.997)PNVQS(0.003)R;SHPLDLS(0.975)PNVQS(0.025)R 109.48 1.9328e-05 41132000.0 3311.3999999999996 4707.6 4382.5 4329.0 5324.9 3978.3999999999996 4429.4 3777.6 6501.0 6286.9 6835.5 True False 3870.2833640429035 4947.1967322146575 5004.004399158619 5389.605194336194 4541.614263852375 4399.39164735181 5234.1646449177215 4313.0863684148035 5028.533879963758 4866.684923558321 5138.056699797288 0.7532582044483078 0.9628536665252914 0.9739099218885696 1.0489579055343685 0.883916727511309 0.856236492587826 1.0187051157150961 0.8394392316816915 0.9786839993731773 0.9471839662163181 1.0 12.327007095505142 -2.000000014028058 0.07244129854950805 1.075571549487527 0.6051952536538517 0.06670019072301947 0.0821272838772904 280.6065235171424 1.4543913180413324 1.5658162117073657 13.373194508342447 0.009999999676992036 2.000000014028058 -0.47037629583367535 SHPLDLS(ph)PNVQSR ddPTM_A549_PD325901_60min_R1 2 SHPLDLSPNVQSR 13 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5;H0YBM4 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 SHPLDLS(1)PNVQSR;SHPLDLS(1)PNVQSR 125.67 7.1492e-07 78721000.0 2098.05 2074.7200000000003 2617.2 2107.4 2380.3999999999996 2134.1000000000004 1980.31 2074.06 2177.64 2460.2 2959.2 True False 2311.0424914972236 2249.563935630475 2794.818930502113 2237.569311747343 2213.208915934192 2116.7205971586004 2055.671780717212 2032.6912462314065 2086.1213637470887 2304.8625521396425 2595.2371599143576 0.8904937580245991 0.8668047646576972 1.0769030952817975 0.8621829813122676 0.8527964033958375 0.8156174047802444 0.7920939991415078 0.7832391111024647 0.803826870225583 0.8881124961295263 1.0 11.341650666712907 -3.8785566741306163 12.068625739484133 0.8873370023356794 0.9569068544886115 0.0 0.08681820877438082 0.0 0.0 0.013441055795094956 0.0 0.00013226450955194444 3.8785566741306163 0.0695698521529321 SHPS(ph)GSGAK ddPTM_A549_MK2206_60min_R1 2 SHPSGSGAK 9 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-2 A0MZ66 KIAA1598 Shootin-1 1 S(0.005)HPS(0.936)GS(0.059)GAK;S(0.015)HPS(0.933)GS(0.052)GAK 45.077 0.015602000000000001 3426600.0 586.06 832.12 463.17 222.127 830.78 938.49 526.81 938.91 1100.9099999999999 745.58 925.86 True False 684.9726002086677 874.4713537281119 528.8544706350935 276.5481249716599 708.5733625276113 1037.8003888807564 622.5245578609074 1072.0033677912818 851.5556427920162 577.1529601722013 695.9434095639409 0.9842360611444726 1.2565265245862902 0.7599101641992116 0.39737156954318653 1.018147959719288 1.4912137605139673 0.8945045664718116 1.540359967576918 1.2235989752752707 0.8293101885020071 1.0 9.442826188290177 -6.996584084007338 24.994421439000604 1.1549448631536285 0.8516305901370333 0.2152539403974587 0.2796911907883048 125.05901948027349 915044.6859021633 0.03867443099549013 0.07283912221019168 1.0078964510542086e-07 6.996584084007338 -0.3033142730165952 SHQEPQRADS(ph)PLEQPEGSPLTQDDR ddPTM_A549_MK2206_60min_R1 4 SHQEPQRADSPLEQPEGSPLTQDDR 25 1 P09603-3;P09603-2;P09603 P09603-3 CSF1 Macrophage colony-stimulating factor 1;Processed macrophage colony-stimulating factor 1 1 S(0.023)HQEPQRADS(0.977)PLEQPEGSPLTQDDR;SHQEPQRADS(0.99)PLEQPEGS(0.005)PLT(0.005)QDDR;S(0.001)HQEPQRADS(0.999)PLEQPEGSPLTQDDR;S(0.002)HQEPQRADS(0.996)PLEQPEGS(0.001)PLT(0.001)QDDR 103.95 3.3118e-12 45140100.0 952.5699999999999 1241.79 1345.2 664.3100000000001 1818.06 1384.94 1368.69 1406.5500000000002 1784.32 1676.0 2203.45 True False 1113.3405278994828 1304.9918068860645 1535.9695876208038 827.065979822009 1550.6257823695184 1531.4934315512307 1617.363256389677 1605.9327698787176 1380.1743689735315 1297.3904359674475 1656.2725528737226 0.672196448566256 0.7879088526956708 0.9273652364496492 0.4993537919752427 0.9362141392001568 0.9246626884530609 0.976507914463392 0.9696065826197128 0.8333014796259555 0.7833194082196223 1.0 10.69372438402381 SHQEPQRADS(ph)PLEQPEGSPLTQDDR ddPTM_A549_PD325901_60min_R1 4 SHQEPQRADSPLEQPEGSPLTQDDR 25 1 P09603-3;P09603-2;P09603 P09603-3 CSF1 Macrophage colony-stimulating factor 1;Processed macrophage colony-stimulating factor 1 1 S(0.004)HQEPQRADS(0.996)PLEQPEGSPLTQDDR;SHQEPQRADS(0.999)PLEQPEGS(0.001)PLTQDDR;SHQEPQRADS(1)PLEQPEGSPLTQDDR;SHQEPQRADS(0.999)PLEQPEGSPLTQDDR 101.88 4.0195e-12 61476200.0 1612.3 1850.71 1325.04 1542.8700000000001 1851.48 2013.37 1500.0500000000002 1580.69 1948.84 2020.4099999999999 1991.72 True False 1775.9795090874727 2006.6758267673097 1414.9651825128076 1638.169575787996 1721.4384320592492 1996.9737822506963 1557.135223608857 1549.1618979226844 1866.937032073656 1892.8409677946718 1746.7510665533352 1.0167330325962305 1.148804695294593 0.8100554278205178 0.9378380280714008 0.9855087339124786 1.1432503580439182 0.8914465566529605 0.886881896101812 1.0688054341695465 1.083635215136636 1.0 10.770458305831257 SHQKFYNMMT(ph)K ddPTM_A549_MK2206_60min_R1 1 SHQKFYNMMTK 11 1 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.003)HQKFY(0.003)NMMT(0.993)K 40.577 0.027925 3223400.0 1382.9 1628.6 1302.2 1232.2 1819.9 1271.0 1289.6 1475.6 1696.4 1915.5 2313.8 True False 1616.2997113411036 1711.4887836869727 1486.8715410346504 1534.08905531556 1552.1951208069515 1405.496376378482 1523.90362714722 1684.7708188354738 1312.1681085941432 1482.787219627473 1739.2196023686572 0.9293246862787494 0.984055596749302 0.8549073038330915 0.8820559825948786 0.8924664364942785 0.8081189830567256 0.8761996616596337 0.9686935545925143 0.7544579803534245 0.852558939427806 1.0 10.764224390535922 -5.762060451783106 24.999651604384457 0.8809183997362634 0.9566901483320132 0.18233309728418656 0.0648861919573874 28.10015571097329 1131359.0839536926 0.012174046182264392 0.04150093843096652 1.7295755935360717e-06 5.762060451783106 0.07577174859574975 SHRDS(ph)EDI ddPTM_A549_MK2206_60min_R1 2 SHRDSEDI 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.006)HRDS(0.994)EDI;S(0.133)HRDS(0.867)EDI 44.318000000000005 0.023271 111067000.0 703.9649999999999 385.2 632.74 246.66 843.96 675.2 639.1 733.03 882.23 1008.64 1192.17 True False 822.7770817081778 404.8050346777735 722.4720464400742 307.0917110729882 719.8146019870519 746.6492158385134 755.2161973556047 836.939247310225 682.4063136318148 780.787523469097 896.1212867818496 0.9181537073658127 0.45173018501938417 0.8062212750626822 0.34268989656056026 0.8032557786592146 0.8332010709397161 0.8427611401440276 0.933957556477473 0.7615111075895452 0.8712967039016123 1.0 9.807550198839659 -6.984782066547947 24.817975245585654 0.8790027124239046 0.622517597997665 0.3521968540703978 0.15478868681870753 176.63585980806457 288062.49662780704 0.02177398425189953 0.04113880417356175 1.0356617420523801e-07 6.984782066547947 -0.25648511442623956 SHRDS(ph)EDI ddPTM_A549_PD325901_60min_R1 1 SHRDSEDI 8 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.002)HRDS(0.998)EDI 54.416000000000004 0.019103 148030000.0 710.8 694.52 980.31 707.16 992.07 924.01 735.82 575.35 728.81 755.44 954.51 True False 782.9598927366966 753.0496378181522 1046.839731682915 750.839667123114 922.3904256557017 916.485168914539 763.8220327561536 563.8741928966568 698.1806502050457 707.741389475803 837.111321137421 0.9353115564998614 0.8995812370509452 1.250538256083464 0.8969412408649715 1.101873075139407 1.094818748442285 0.9124497703821686 0.673595229999393 0.834035608617019 0.8454567171713349 1.0 9.709275678468831 -7.853138673091736 7.422277349346312 0.8959577872886991 1.030943385002838 0.3113857585706268 0.1237473837150504 0.295300062667538 20.699200606568247 0.020593792638468486 0.028531064522391552 1.4023658484016944e-08 7.853138673091736 0.13498559771413887 SHS(ph)AGEVGEDSR ddPTM_A549_MK2206_60min_R1 4 SHSAGEVGEDSR 12 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 S(0.065)HS(0.933)AGEVGEDS(0.002)R;S(0.005)HS(0.995)AGEVGEDSR;S(0.159)HS(0.841)AGEVGEDSR;S(0.068)HS(0.932)AGEVGEDSR 146.84 1.9561e-12 42519200.0 1141.46 829.57 956.35 189.358 1354.41 1082.9199999999998 930.1500000000001 755.78 1549.01 1369.76 1691.27 True False 1334.1105419823677 871.7915696200434 1091.9748105271751 235.75071850060365 1155.1780831760782 1197.5138756158815 1099.1462149433826 862.9141294791776 1198.1617082606774 1060.330264660364 1271.280982322603 1.0494222445969235 0.6857583663583947 0.8589563013301439 0.1854434399466058 0.908672511615483 0.9419741915969272 0.8645973865944774 0.6787752994642082 0.9424837820445184 0.8340644431911216 1.0 10.312067219019005 -8.722781859537248 0.6467375991378455 0.995358353455303 0.7399765792603161 0.04768188665164763 0.2214919867922699 0.8166611038761932 0.7341642819105528 0.06234356371263697 0.06391327374759774 1.893294356953724e-09 8.722781859537248 -0.25538177419498687 SHS(ph)AGEVGEDSR ddPTM_A549_PD325901_60min_R1 4 SHSAGEVGEDSR 12 0 A0A2R8Y6F3;Q9P2P5;A0A2R8YE75 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 S(0.034)HS(0.966)AGEVGEDSR;S(0.002)HS(0.998)AGEVGEDSR;S(0.005)HS(0.995)AGEVGEDSR;S(0.005)HS(0.995)AGEVGEDSR 154.13 3.2574e-14 48350300.0 1086.54 1462.21 1256.03 1538.8100000000002 1285.5500000000002 1555.27 1091.841 1214.83 1474.15 1432.3000000000002 1806.26 True False 1196.8447409315281 1585.4355683264416 1341.2717489219656 1633.8587988089255 1195.2574029067387 1542.6043967681258 1133.3916067333205 1190.5992626343007 1412.196601994714 1341.8643335621523 1584.10147082553 0.7555354015976079 1.0008421793208844 0.8467082277393395 1.0314104423862855 0.754533358449474 0.9738040303467563 0.7154791707520295 0.7515928016996527 0.8914811506732391 0.8470823102404296 1.0 10.629449035968548 -10.010913269409453 1.0505460599252914 0.9857938556608316 0.8621286972590979 0.0 0.1119272995833163 0.53695380082528 1.1954942149687666 0.034856061321919596 0.018818970955257794 9.751843670422889e-11 10.010913269409453 -0.12366515840173364 SHS(ph)DLVR ddPTM_A549_MK2206_60min_R1 2 SHSDLVR 7 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 S(0.04)HS(0.96)DLVR;S(0.007)HS(0.993)DLVR 86.744 0.0040000999999999995 59376000.0 2332.3 2340.6 2014.88 1250.42 2795.2 2468.88 2091.38 2165.18 3047.1 3405.1 3596.8999999999996 True False 2725.9352207396446 2459.7265424890875 2300.6202815234947 1556.7729561334877 2384.0297827790487 2730.1352428900923 2471.356674738797 2472.1008955856546 2356.936715218823 2635.885545055343 2703.6904606101766 1.0082275543201227 0.9097663280337089 0.8509185186104049 0.5757955575218292 0.8817687592243877 1.0097809947792424 0.9140679048669847 0.9143431659805257 0.8717479865231698 0.9749213467507921 1.0 11.400714274852772 -7.001026617827013 24.999841237218703 0.9385200205455079 0.8282733399789505 0.1980107888320506 0.10405696113556145 52.599842421381716 1280962.0478561001 0.015775913330503887 0.02954438905762538 9.976389168473828e-08 7.001026617827013 -0.1102466805665574 SHS(ph)DLVR ddPTM_A549_PD325901_60min_R1 2 SHSDLVR 7 0 O60269 O60269 GPRIN2 G protein-regulated inducer of neurite outgrowth 2 1 SHS(1)DLVR;S(0.001)HS(0.999)DLVR 90.919 0.003833 76323000.0 3410.5 3752.0 3696.4 3459.8 4329.1 3823.8 3713.9 3605.7 4971.9 4116.5 4471.1 True False 3756.731449322597 4068.1942076451433 3947.259932258904 3673.5039882240976 4025.0389505842354 3792.660240576848 3855.2344968240595 3533.781484883072 4762.94833324799 3856.583487473714 3921.183044638108 0.9580607195727868 1.0374915328699232 1.0066502602209437 0.936835630065092 1.0264858602018443 0.9672234622566257 0.9831814666483811 0.9012028881730539 1.2146712558499217 0.9835254930899671 1.0 11.937073274496152 -8.751352555721429 24.999917985370473 1.1013725423388105 0.9803087971710261 0.20554389641569148 0.06870169183279168 180.77769570386175 448052.32989370835 0.013856005248189189 0.015621781768891108 1.7727497968516135e-09 8.751352555721429 -0.1210637451677844 SHS(ph)DNDSQVSK ddPTM_A549_MK2206_60min_R1 1 SHSDNDSQVSK 11 0 Q5JRI1;O75494-4 Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.451)HS(0.534)DNDS(0.015)QVSK 43.761 0.019549 1353100.0 976.85 831.66 630.56 655.13 1056.8 932.75 952.49 932.23 1377.6 1150.3 1561.2 True False 1141.7183983104753 873.987941692931 719.9828896596593 815.6368794099028 901.3461199344946 1031.4529858906603 1125.545103769739 1064.3764573346396 1065.5757995751537 890.4464310819541 1173.51095307198 0.9729081738195291 0.7447633440531874 0.6135289046726925 0.6950398522269896 0.7680764440885525 0.8789461940602729 0.9591262022934872 0.9070017238001472 0.9080237357697624 0.7587883425808437 1.0 10.196615592112334 -7.390890007793503 2.4402413378611345 0.9511209891424798 0.7439900238862884 0.2837861855506446 0.10242543924885787 0.1732590751975957 2.0148954695188697 0.013605406952093262 0.02308878827690828 4.0654628064662717e-08 7.390890007793503 -0.20713096525619135 SHS(ph)FCK ddPTM_A549_PD325901_60min_R1 1 SHSFCK 6 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.042)HS(0.958)FCK 55.531000000000006 0.019802 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SHS(ph)GPAGSFNKPAIR ddPTM_A549_MK2206_60min_R1 1 SHSGPAGSFNKPAIR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 S(0.381)HS(0.618)GPAGS(0.002)FNKPAIR 57.36600000000001 0.0029256 18886000.0 3950.3 3825.4 4431.3 3430.1 6503.9 4588.7 3738.2 4301.3 6350.8 5857.0 7048.7 True False 4617.014064437604 4020.096520395521 5059.724972958721 4270.47465398304 5547.184925664232 5074.273188267462 4417.3825519554375 4911.022447178795 4912.353940143645 4533.899632136839 5298.313255776628 0.8714120591876634 0.7587502524529866 0.9549690115891545 0.8060064491896626 1.046971867814019 0.9577148317410451 0.8337337448176112 0.9269029991430615 0.9271543042095179 0.8557250983968593 1.0 12.371317428330975 -2.0000000000001674 0.09004767410787037 1.0549424046079185 0.4568086120001821 0.015971736016839655 0.08203505421152116 121.26735229667563 0.7617726896777917 0.6475340141729067 8.984931725294835 0.009999999999996146 2.0000000000001674 -0.5981337926077365 SHS(ph)GPAGSFNKPAIR ddPTM_A549_PD325901_60min_R1 2 SHSGPAGSFNKPAIR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 S(0.049)HS(0.947)GPAGS(0.004)FNKPAIR;S(0.009)HS(0.991)GPAGSFNKPAIR 88.264 1.0444e-05 58511000.0 9947.400000000001 9514.3 9986.099999999999 11037.8 12592.099999999999 12936.6 11485.8 12325.0 13495.2 13336.5 13754.1 True False 10957.252725111164 10316.10345143876 10663.816797297552 11719.579837337393 11707.674336386717 12831.248618716063 11922.898404270927 12079.168206224538 12928.043674822156 12494.431113978673 12062.43289442352 0.9083783363617067 0.8552257692731213 0.8840519064961969 0.9715767905125815 0.9705898004870304 1.0637363731696254 0.9884323095204866 1.0013873910800162 1.0717608784210364 1.035813523137183 1.0 13.558233295969405 -6.5567374032214 1.398385969194296 1.0298650345922173 0.8747609490134435 0.7983512040939614 0.030112030005152297 0.14862227031576475 0.5656241469227595 0.0052538464011807435 0.01647348059192786 2.7749975036828186e-07 6.5567374032214 -0.15510408557877386 SHS(ph)LAK ddPTM_A549_MK2206_60min_R1 3 SHSLAK 6 0 Q8WYL5;Q8WYL5-4;P55084-2;P55084;F5GZQ3 Q8WYL5;P55084-2 SSH1;HADHB Protein phosphatase Slingshot homolog 1;Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase 1 S(0.003)HS(0.997)LAK;S(0.065)HS(0.935)LAK;S(0.111)HS(0.889)LAK 75.854 0.014118 54375000.0 8277.599999999999 6189.02 5465.27 3404.1800000000003 11972.3 10805.400000000001 9446.7 9370.3 14294.7 11009.6 10449.2 True False 9674.656512110134 6504.014682558236 6240.327466649091 4238.204252819447 10211.190529609914 11948.82025595598 11163.043109934579 10698.568720340234 11056.973273945223 8522.523713500723 7854.375256751046 1.2317537927404865 0.8280753681800295 0.7945033516555453 0.539597881980059 1.3000640020137975 1.5212948026242632 1.4212515629858204 1.3621158106934765 1.407747008833256 1.0850670403321239 1.0 12.939280811635186 -6.78726684065787 24.99635792116812 1.25881326961339 0.8431692070660199 0.5171505713752647 0.20731159199176472 166.36359540415052 161009.76560495517 0.03474219983988314 0.0656722767828587 1.6320488708816276e-07 6.78726684065787 -0.4156440625473701 SHS(ph)LAK ddPTM_A549_PD325901_60min_R1 6 SHSLAK 6 0 Q8WYL5;Q8WYL5-4;P55084-2;P55084;F5GZQ3 Q8WYL5;P55084-2 SSH1;HADHB Protein phosphatase Slingshot homolog 1;Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase 1 S(0.001)HS(0.999)LAK;S(0.009)HS(0.991)LAK;S(0.001)HS(0.999)LAK;S(0.111)HS(0.889)LAK;SHS(1)LAK;S(0.003)HS(0.997)LAK 85.212 0.012312 73235600.0 18282.5 15973.2 15589.4 14375.0 15238.899999999998 14124.3 12677.0 12151.34 16914.0 20019.7 23746.6 True False 20138.525941134856 17319.317621950282 16647.39043067768 15262.911102006297 14168.572235351014 14009.276383696739 13159.430172120574 11908.971991158174 16203.163400019397 18755.652725416625 20825.91874209999 0.9669933984916805 0.8316232208732742 0.7993592329266445 0.7328805653674252 0.6803335982824602 0.6726846751484111 0.6318775337156451 0.5718341715740953 0.7780287439259231 0.900591851801559 1.0 14.346092521499669 -10.15484513362007 0.9389206331314928 0.9805819761840173 0.7361141445439189 0.3617146567057009 0.10496614955371802 0.3571898061478163 0.6259684861961974 0.04742238822858864 0.021373477579938238 7.000915992723815e-11 10.15484513362007 -0.24446783164009844 SHS(ph)LSGAR ddPTM_A549_PD325901_60min_R1 1 SHSLSGAR 8 0 A0A0J9YYJ3;Q9Y519 A0A0J9YYJ3 TMEM184B Transmembrane protein 184B 1 S(0.016)HS(0.953)LS(0.031)GAR 58.37 0.004534399999999999 11205000.0 947.11 1472.1 1277.4 920.48 1316.4 1168.0 1033.3 1110.1 1307.7 1559.4 1467.6 True False 1043.2599099744682 1596.1590333353997 1364.0920456302144 977.3359590382431 1223.9406053334615 1158.488195249166 1072.622796943456 1087.9581846433964 1252.7419166492482 1460.939217871131 1287.0945038829116 0.8105542419978935 1.2401257471926894 1.0598227570042575 0.7593350419023718 0.9509329747280194 0.900080135339118 0.8333675528157128 0.8452822860801907 0.9733099728652183 1.1350675598907183 1.0 10.329902270837454 -4.960118722586283 16.469654202575896 0.9649383293998225 0.11003816720382291 0.10553558379114436 0.13255476230038707 508845.9553197957 5646272.930214892 0.01660749520086093 13154637.731565135 1.0961784941180336e-05 4.960118722586283 -0.8549001621959996 SHS(ph)PIQDVPK ddPTM_A549_PD325901_60min_R1 2 SHSPIQDVPK 10 0 E7ETV1;Q9BWF2 E7ETV1 TRAIP E3 ubiquitin-protein ligase TRAIP 1 S(0.145)HS(0.855)PIQDVPK;S(0.18)HS(0.82)PIQDVPK 86.803 0.00022687 18792600.0 3965.8 3401.8 4317.4 3084.7 4345.1 3747.8999999999996 4102.4 3342.3999999999996 3583.6 3939.6 4322.7 True False 4368.405096532344 3688.4816246181394 4610.404726635266 3275.234913138003 4039.915165781239 3717.3783450122855 4258.519076919415 3275.733209937925 3432.99375430469 3690.8529836636562 3791.0353038530016 1.152298711671858 0.9729483713510575 1.216133419266632 0.8639420766694609 1.0656495764297655 0.9805707536498394 1.1233129569094986 0.8640735174923453 0.9055557332361379 0.9735738888826687 1.0 11.888376176268638 -6.1077142308961925 0.5073289406703319 0.9555139356208532 1.1436279018140016 0.202849022959686 0.09922926714831846 2.452582660097457 0.6944645472797755 0.01973183305497908 0.2335623107476406 7.803434135840388e-07 6.1077142308961925 0.18811396619314846 SHS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 SHSPLR 6 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.198)HS(0.802)PLR;S(0.121)HS(0.879)PLR 81.32 0.042338 120806000.0 6740.2 5731.8 3864.2 2415.6 7372.2 6005.1 5522.8 5366.799999999999 8247.7 8855.0 8979.1 True False 7877.780977931376 6023.524137502758 4412.201665539926 3007.422108440405 6287.759145894284 6640.555696137235 6526.221271718875 6127.560335135686 6379.609118870498 6854.649349935406 6749.341659446976 1.1671925019390499 0.8924609897428589 0.6537232649000985 0.4455874750733578 0.9316107352623615 0.9838819889703649 0.9669419035239085 0.9078752631464447 0.9452194659520654 1.0156026610893274 1.0 12.720531071126112 -6.974460960008163 24.999910346711992 0.9676072266588254 0.7750171975902411 0.20727061949069792 0.1647361408649231 260.5292113595797 255028.22115924495 0.023857064720639747 0.04508467808209895 1.0605692717382893e-07 6.974460960008163 -0.19259002906858425 SHS(ph)PSASQSGSQLR ddPTM_A549_MK2206_60min_R1 2 SHSPSASQSGSQLR 14 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.172)HS(0.827)PS(0.001)ASQSGSQLR;S(0.147)HS(0.853)PS(0.001)ASQSGSQLR 92.8 1.8435999999999998e-05 10562900.0 785.3 1182.45 1126.57 999.08 1276.98 777.73 687.6500000000001 1051.43 1160.83 1358.8400000000001 1460.99 True False 917.8394412583466 1242.631654347699 1286.3345661061323 1243.8546448504057 1089.1379336051766 860.0288723846078 812.5871039142256 1200.473422369329 897.9038584645946 1051.8771002446342 1098.1858617272817 0.8357778708011436 1.1315312805003934 1.1713268317649992 1.1326449266921075 0.9917610229402571 0.7831359903249085 0.7399358635305575 1.0931423033266559 0.817624675164117 0.9578315810678798 1.0 10.100906527621065 -7.000279878318359 8.57994724178058 0.9034540028573077 1.0778214774480386 0.28791364082584425 0.12433948467641466 0.10977688935141464 94.43696215159031 0.01864486356731578 0.034274523262924475 9.993557639654987e-08 7.000279878318359 0.17436747459073088 SHS(ph)PSASQSGSQLR ddPTM_A549_PD325901_60min_R1 2 SHSPSASQSGSQLR 14 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.035)HS(0.964)PSASQSGSQLR;S(0.027)HS(0.861)PS(0.112)ASQSGSQLR 123.73 3.5681e-07 25339000.0 1103.3000000000002 1509.03 1200.49 1505.6 1629.97 1517.96 1044.3600000000001 1504.99 1045.61 1584.1399999999999 1987.7 True False 1215.3062037934685 1636.2012540412452 1281.9624705328147 1598.597492534308 1515.4865302912342 1505.5982370380345 1084.1036912957197 1474.9717938081856 1001.6666479067212 1484.1171300489762 1743.2255010684546 0.6971594914419191 0.9386056210389233 0.7353968088162298 0.9170342514806595 0.8693577103836336 0.8636852983823528 0.6218952686449647 0.8461164622156735 0.5746053205926493 0.8513626774845444 1.0 10.767543491090809 SHS(ph)PSSPDPDTPSPVGDSR ddPTM_A549_MK2206_60min_R1 1 SHSPSSPDPDTPSPVGDSR 19 0 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 S(0.1)HS(0.471)PS(0.411)S(0.018)PDPDTPSPVGDSR 104.52 5.429400000000001e-10 9301400.0 702.31 636.96 595.79 256.63 821.48 571.11 424.2 582.39 849.97 1022.2 1044.2 True False 820.8427581690432 669.37854332387 680.2819808270879 319.5043615205584 700.641380207976 631.544481127864 501.2716490662608 664.945565994573 657.4531521231806 791.2843100512674 784.8963215460946 1.0457976877151636 0.8528241564507821 0.8667157204751111 0.40706568848634217 0.892654686962792 0.8046215325405565 0.6386469592300448 0.8471763056358301 0.8376305686184445 1.008138639881239 1.0 9.616358288021312 -9.986480441922799 0.6952476313131241 0.992466970716056 0.785599327807762 0.2068598375461379 0.15402485412516576 0.797403928981782 0.7752326663809869 0.08000575746388038 0.03311288496297073 1.0316195364889758e-10 9.986480441922799 -0.20686764290829407 SHS(ph)PSSPDPDTPSPVGDSR ddPTM_A549_PD325901_60min_R1 1 SHSPSSPDPDTPSPVGDSR 19 0 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 S(0.077)HS(0.467)PS(0.387)S(0.07)PDPDTPSPVGDSR 116.35 1.8367e-14 16126000.0 888.56 669.35 820.36 809.09 791.42 709.18 723.92 1086.2 946.17 838.14 943.22 True False 978.7659570767007 725.7584735840295 876.0345628254286 859.0656517232884 735.8333894507809 703.4046732078795 751.4691717442237 1064.5348888925837 906.4057652948064 785.2196973621325 827.2099195642143 1.1832135156120085 0.8773570727565371 1.0590232806769724 1.0385098527056544 0.8895364671623235 0.8503339437448271 0.9084382983948115 1.2868981182592631 1.0957385106942548 0.9492387346803061 1.0 9.692109675742241 SHS(ph)SSEAYEPR ddPTM_A549_MK2206_60min_R1 2 SHSSSEAYEPR 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 S(0.007)HS(0.96)S(0.028)S(0.005)EAYEPR;S(0.006)HS(0.957)S(0.03)S(0.006)EAYEPR 68.536 0.004043199999999999 12645600.0 861.88 1205.82 810.3199999999999 725.22 1027.86 715.96 679.67 918.04 1028.47 1563.51 1375.4 True False 1007.3442730571039 1267.1910875263577 925.2355606905215 902.8989325563629 876.6631555979086 791.7224119842153 803.157241209019 1048.1749813795868 795.5231871291077 1210.3120050951454 1033.8502208911104 0.9743619072681919 1.2257008432363856 0.894941590178343 0.8733363056963163 0.8479595379321804 0.7657999156800518 0.7768603468660583 1.0138557406082762 0.769476246223964 1.1706840900531381 1.0 10.0138114749285 -5.85203691796248 8.099405423793625 0.8769778814609887 1.099038312204007 0.24119641017929117 0.1302657161662793 0.1683901814971022 13.064355351424322 0.014845660774404685 0.04657702323402383 1.405928005679452e-06 5.85203691796248 0.2220604307430184 SHS(ph)SSEAYEPR ddPTM_A549_PD325901_60min_R1 4 SHSSSEAYEPR 11 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 S(0.205)HS(0.538)S(0.233)S(0.024)EAYEPR;S(0.001)HS(0.758)S(0.237)S(0.004)EAYEPR;S(0.03)HS(0.689)S(0.275)S(0.006)EAYEPR;SHS(0.967)S(0.027)S(0.005)EAYEPR 133.07 6.9294e-08 42905700.0 3947.8799999999997 4412.14 4344.71 4557.63 5273.35 4341.71 3055.8900000000003 4606.69 4372.96 4491.32 5286.34 True False 4348.665871324351 4783.966522206676 4639.5681474636385 4839.144453971265 4902.968088069895 4306.352553249364 3172.1835661971727 4514.805954071608 4189.179698578032 4207.737288706535 4636.1536928702635 0.9379900148720205 1.0318826421918943 1.0007364843401603 1.0437843036595555 1.0575508088978918 0.9288631996544708 0.6842274385932318 0.9738257730788193 0.9035894787138715 0.9075922774470201 1.0 12.17871267850138 -7.280135682089472 23.11343862732216 0.9309044306786671 1.0162353398879123 0.27832963122093823 0.08411734636320489 422.94748814411184 522871.04784290766 0.013555946669076118 0.02170004535376308 5.2464352574524514e-08 7.280135682089472 0.08533090920924513 SHS(ph)VFNIK ddPTM_A549_PD325901_60min_R1 2 SHSVFNIK 8 0 H7BYN4;H0YME6;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 S(0.151)HS(0.849)VFNIK;S(0.12)HS(0.88)VFNIK 63.184 0.0030775 3969800.0 983.4200000000001 1128.42 1170.9 1279.54 1073.42 1213.37 1194.54 976.47 1439.6399999999999 1506.24 1623.61 True False 1083.2560744444597 1223.515913590335 1250.36431519369 1358.5742797538185 998.0266822979673 1203.4887170115408 1239.9988733773698 956.9935398241042 1379.1369372829577 1411.1357493434732 1423.9162629117839 0.7607582711565468 0.8592611415845144 0.8781164649645932 0.9541110774138173 0.7009026501720617 0.8451962719707351 0.8708369344989999 0.6720855465665772 0.9685519950890537 0.9910243924441345 1.0 10.47564859203801 -8.961333894150274 23.65510151102249 0.986126001364463 0.824151919953549 0.4843509027246098 0.0775806727965291 53.02647658235348 32440.67248339526 0.01290164706743507 0.013705461786656926 1.0931156343014176e-09 8.961333894150274 -0.16197408141091407 SHS(ph)VPENMVEPPLSGR ddPTM_A549_MK2206_60min_R1 4 SHSVPENMVEPPLSGR 16 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.165)HS(0.835)VPENMVEPPLSGR;S(0.195)HS(0.805)VPENMVEPPLSGR;S(0.23)HS(0.77)VPENMVEPPLSGR;S(0.155)HS(0.845)VPENMVEPPLSGR 81.807 5.5753999999999995e-05 19843300.0 2856.62 2815.04 2269.08 2335.49 3173.4300000000003 2251.92 2005.46 2365.3199999999997 3474.55 3560.7299999999996 3884.73 True False 3338.7476183463873 2958.3135119920034 2590.869663900247 2907.6851548441314 2706.622650817303 2490.2166796964857 2369.826122905291 2700.6113534887 2687.56997271621 2756.358619965614 2920.044327906299 1.1433893610581942 1.0131056860061929 0.8872706620032466 0.9957674707386962 0.9269114940998101 0.8528009852103842 0.8115719683627133 0.9248528618827734 0.9203867033906382 0.943944101678056 1.0 11.511774554851344 -5.384568386909543 2.9341419320444797 0.9379726813408724 1.1539097388157253 0.5753989412275917 0.05574968384479019 0.210229450893855 2.8414923525019526 0.008981038468305075 0.09066962676215548 4.125072758516637e-06 5.384568386909543 0.21593705747485292 SHS(ph)VPENMVEPPLSGR ddPTM_A549_PD325901_60min_R1 2 SHSVPENMVEPPLSGR 16 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.132)HS(0.868)VPENMVEPPLSGR;S(0.317)HS(0.683)VPENMVEPPLSGR 55.588 0.0029146999999999997 15563700.0 3228.84 3509.4 3051.0 3194.67 3692.5 3260.7999999999997 2899.98 3207.9399999999996 3444.54 3805.7 3569.8199999999997 True False 3556.6294598536215 3805.1494542403693 3258.0592071534247 3391.9975102780118 3433.1515384334566 3234.245125914796 3010.3403258299445 3143.9551201197555 3299.7779625105127 3565.407452515175 3130.7547709534583 1.1360293986777077 1.2154096160912427 1.0406625384335664 1.0834440122069966 1.0965890941972132 1.0330560400071898 0.9615382059812874 1.0042163472172165 1.0539880009527476 1.138833193067161 1.0 11.612294792632438 -6.025333810750104 0.7263693622353605 1.0203025212946761 1.1980372650898972 0.3842659145524676 0.0552833354661625 0.6670900104660883 0.4337064925506771 0.007250635612563784 0.0781319967856471 9.433355237851586e-07 6.025333810750104 0.17773474379522103 SHS(ph)VSAVDGLEDKLDNFKK ddPTM_A549_PD325901_60min_R1 1 SHSVSAVDGLEDKLDNFKK 19 2 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 S(0.297)HS(0.591)VS(0.113)AVDGLEDKLDNFKK 53.778999999999996 0.0023303 2938500.0 1561.6 1392.3 1433.4 1488.1 2155.4 1610.5 1818.7 2049.2 1872.8 1648.1 1754.9 True False 1720.132482410839 1509.634007277275 1530.679143734421 1580.0165572796916 2004.0121397263295 1597.3846219595725 1887.9116237308267 2008.3270984336984 1794.0927288374332 1544.038684733495 1539.058425227666 1.117652490779476 0.9808815458412253 0.9945555793361089 1.0266124608271234 1.3021027057045511 1.0378973246082446 1.2266666377214084 1.3049063411199713 1.1657080065508503 1.0032359132208333 1.0 10.587832284480456 -6.5814254484212436 24.99999864424045 1.120289797582074 1.0234364536919667 0.19154698903369405 0.10744956660077022 121.54949230559846 51902.14635868113 0.016790036624853632 0.03495125198456098 2.6216490358335255e-07 6.5814254484212436 -0.09685334389010736 SHS(ph)WVNSAYAPGGSK ddPTM_A549_PD325901_60min_R1 1 SHSWVNSAYAPGGSK 15 0 K7ESB7;K7EKT0 K7ESB7 DOCK6 1 S(0.184)HS(0.815)WVNSAYAPGGSK 96.012 5.5836e-06 13283000.0 2010.1 1996.4 2436.7 2252.6 2279.2 2547.3 2326.9 2341.2 3041.5 2576.8 3511.6 True False 2214.1638722425914 2164.643634366408 2602.0691150674356 2391.7379859742173 2119.116854813146 2526.5556333546224 2415.4514528285385 2294.5029293641287 2913.6763321011595 2414.100408240561 3079.6954618664713 0.7189554615574495 0.7028758723612596 0.8449111762142979 0.7766150957421899 0.6880929887557259 0.8203913876027812 0.7843150346315856 0.7450421503603895 0.9460923549678855 0.7838763404149962 1.0 11.588571980589633 -8.82200491510685 4.334667390297373 0.976749663874393 0.7616666488910296 0.3745084951530121 0.07402316218060045 0.06242361580032059 2.307285495169615 0.008388449048019537 0.008953733953504526 1.506590015330429e-09 8.82200491510685 -0.21508301498336335 SHSAGRT(ph)PGRT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 SHSAGRTPGRTPGK 14 2 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 2 S(0.298)HS(0.188)AGRT(0.516)PGRT(0.999)PGK;S(0.303)HS(0.037)AGRT(0.661)PGRT(0.999)PGK 56.428000000000004 0.0041655 139160000.0 8056.9 7994.700000000001 8475.1 8204.5 10243.400000000001 8976.2 7922.799999999999 7940.6 9764.6 9246.0 10331.5 True False 8874.830556823703 8668.44142640209 9050.27125091642 8711.273331228564 9523.938921811583 8903.100803249621 8224.306489522518 7782.218503719807 9354.227819311196 8662.205982067771 9060.79099677453 0.9794763569740185 0.9566980884437011 0.9988389815125571 0.9614252590452215 1.0511156173011742 0.9825964208223052 0.907680851754578 0.8588895281317193 1.032385342807391 0.9560099096371776 1.0 13.145421286071702 SHSES(ph)PSRLPINR ddPTM_A549_MK2206_60min_R1 2 SHSESPSRLPINR 13 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.004)HS(0.006)ES(0.832)PS(0.158)RLPINR;S(0.021)HS(0.037)ES(0.913)PS(0.028)RLPINR 67.416 0.001224 14637100.0 2259.82 2896.4 2628.8999999999996 1951.98 3677.8 2661.4 2723.3 2735.7 4218.200000000001 3841.6 4943.5 True False 2641.222368705511 3043.8143884753476 3001.7175504730376 2430.2151876277126 3136.800491952202 2943.0275815056593 3218.0883590338262 3123.4938527298764 3262.784435081236 2973.779891892925 3715.8925163408508 0.7107908415247707 0.8191341313264576 0.8078052681214035 0.6540057810985387 0.8441580261425596 0.7920109552586697 0.8660337576725101 0.8405770185747119 0.8780621131351227 0.800286843286117 1.0 11.859493056462124 -9.334840257805121 0.2579113542114746 1.049730227667277 0.7293456131574884 0.18258767043546886 0.07695546803796867 0.7639087994816368 0.14610621001435042 0.08922201441705792 0.049815376709498045 4.6255112566696035e-10 9.334840257805121 -0.3203846145097887 SHSLSRPGPT(ph)EGDAEGEAEGPVGSTLGSYATLTR ddPTM_A549_MK2206_60min_R1 1 SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTR 34 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.23)HS(0.21)LS(0.253)RPGPT(0.306)EGDAEGEAEGPVGSTLGSYATLTR 101.45 3.6465e-14 7521600.0 1233.9 1232.6 1467.3 1227.6 1677.6 915.81 1417.6 908.31 2052.7 1595.4 1946.3 True False 1442.1521540413537 1295.3340751397284 1675.385203624745 1528.3620551090573 1430.827262303282 1012.7204063345226 1675.1595702883826 1037.0657240827118 1587.7667274883256 1234.9980319465792 1462.9799948526743 0.9857634137960868 0.8854079206121829 1.1451866802822963 1.044691014563714 0.9780224386782335 0.6922312060982803 1.145032451696016 0.7088721156348736 1.085296267259087 0.8441660421138887 1.0 10.514694326507477 SHSPSS(ph)PDPDTPSPVGDSR ddPTM_A549_MK2206_60min_R1 1 SHSPSSPDPDTPSPVGDSR 19 0 E9PNJ4;G0XQ39;Q13586;H0YDB2 E9PNJ4 STIM1 Stromal interaction molecule 1 1 S(0.038)HS(0.278)PS(0.318)S(0.366)PDPDTPSPVGDSR 91.729 1.3766999999999999e-06 13360000.0 809.23 703.25 890.61 468.6 778.16 475.63 724.83 761.35 1018.4 1189.4 1352.4 True False 945.8082402260183 739.0424211763868 1016.9118900022044 583.4070210362537 663.6936948223184 525.9608509023586 856.52222864851 869.2736940365877 787.7340260506217 920.7137139258247 1016.5617556588186 0.9303991960754553 0.727001991824318 1.0003444299782445 0.5739021931413859 0.6528808418453519 0.5173919321423726 0.8425678261852481 0.855111545558021 0.7749003163512707 0.9057135081076543 1.0 9.989482145566761 -10.461268969335162 0.5675133567542452 1.0230928451570096 0.7500964721315537 0.20849126130751938 0.13982771669634841 1.0757001394151233 0.5544681739850529 0.1483043032124842 0.03192295177125055 3.4572519532760786e-11 10.461268969335162 -0.2729963730254559 SHSS(ph)LPPNNSYADFER ddPTM_A549_MK2206_60min_R1 1 SHSSLPPNNSYADFER 16 0 O43293 O43293 DAPK3 Death-associated protein kinase 3 1 S(0.005)HS(0.151)S(0.844)LPPNNSYADFER 94.281 2.1238e-06 7353600.0 2419.1 2856.6 2034.3 2349.1 3296.7 2784.3 2586.3 3125.5 3785.1 3431.8 3873.4 True False 2827.384938683392 3001.9887384748918 2322.794329539848 2924.6296054551044 2811.759797112084 3078.932777931243 3056.1972323905484 3568.5491964423104 2927.7808935626563 2656.5539965113867 2911.527879598393 0.9711000737775496 1.0310698927220907 0.7977922333548965 1.0044999486175343 0.9657334270485946 1.0574972678454795 1.0496884655667835 1.225662038631945 1.0055822972117667 0.9124260891081776 1.0 11.507560718157736 -6.500573980466723 24.37126739423885 1.0240612366499036 0.936104057362162 0.18168041290734116 0.08973493895801148 750.3029145455199 819815.9166210991 0.011842571556164694 0.027300903067392156 3.1581010317117246e-07 6.500573980466723 -0.0879571792877416 SHSS(ph)LPPNNSYADFER ddPTM_A549_PD325901_60min_R1 2 SHSSLPPNNSYADFER 16 0 O43293 O43293 DAPK3 Death-associated protein kinase 3 1 S(0.014)HS(0.128)S(0.858)LPPNNSYADFER;S(0.007)HS(0.144)S(0.849)LPPNNSYADFER 100.39 4.0149000000000003e-07 30094000.0 5328.8 6587.4 5776.5 5952.5 7073.2 6508.8 5245.3 6053.799999999999 6857.4 6706.700000000001 7381.700000000001 True False 5869.775853144775 7142.5433164823135 6168.528026916339 6320.172405891647 6576.402833215307 6455.7944907857645 5444.912761838297 5933.052209885775 6569.20732525086 6283.237817427415 6473.797696451686 0.9066974484485394 1.1033003580567817 0.9528453492294536 0.9762696800605553 1.0158492961279681 0.9972190657616953 0.8410693409252927 0.9164716736727353 1.0147378143823476 0.9705644371419396 1.0 12.660396567279586 SHSS(ph)PSQIPK ddPTM_A549_MK2206_60min_R1 2 SHSSPSQIPK 10 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 S(0.004)HS(0.13)S(0.861)PS(0.006)QIPK;S(0.006)HS(0.219)S(0.744)PS(0.03)QIPK 97.749 0.00015644 33080000.0 6727.4 6679.9 5792.700000000001 4720.6 8644.1 6226.200000000001 5112.9 6552.4 9364.4 9685.099999999999 10536.2 True False 7862.820650861333 7019.878377840238 6614.191964177101 5877.147211915789 7372.564340770025 6885.052351382929 6041.847747550416 7481.2227658834145 7243.378351873959 7497.229183405918 7919.770755673205 0.9928091220606258 0.8863739361157211 0.8351494213944421 0.7420855215671218 0.9309062810295113 0.8693499551676959 0.7628816456868316 0.9446261762721296 0.9145944466492641 0.9466472470854531 1.0 12.951242955567983 -9.503870311906542 0.6709528923843028 0.9901741834391816 0.8615565247312007 0.23786137755502545 0.07088065166211736 0.5290308397323563 0.5207650708217171 0.028067762798409238 0.016856397098862354 3.1342215191425584e-10 9.503870311906542 -0.12861765870798092 SHSS(ph)PSQIPK ddPTM_A549_PD325901_60min_R1 2 SHSSPSQIPK 10 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 S(0.002)HS(0.111)S(0.886)PS(0.001)QIPK;S(0.001)HS(0.092)S(0.907)PSQIPK 113.38 3.3562e-05 64288000.0 4295.9 4448.6 4637.7 4598.200000000001 4792.1 4947.6 4719.299999999999 5062.0 5339.0 5221.1 5221.8 True False 4732.016605525566 4823.499134363055 4952.442210755632 4882.2203707301105 4455.519427847522 4907.308385971551 4898.89554400005 4961.034438937823 5114.620396872627 4891.438854961502 4579.551703717493 1.0332925385871958 1.0532688451683023 1.0814251112691755 1.0660913308975033 0.9729160660487167 1.0715695997029573 1.0697325548313663 1.0833013272697976 1.1168386618980164 1.0681042974120878 1.0 12.160990663229223 SHT(ph)DERPHK ddPTM_A549_MK2206_60min_R1 2 SHTDERPHK 9 1 A0A2R8Y595;A0A2R8YFL0;P49711 A0A2R8Y595 CTCF Transcriptional repressor CTCF 1 S(0.023)HT(0.977)DERPHK;S(0.13)HT(0.87)DERPHK 69.45100000000001 0.0022517 21212900.0 1263.17 844.2 994.4200000000001 545.04 1215.9 1051.79 819.38 1127.37 1574.5700000000002 1891.99 2013.2 True False 1476.3622144585595 887.1661741302604 1135.4437089814758 678.5748244677753 1037.0427206929899 1163.0897196783028 968.2507397734865 1287.1781499258257 1217.9324090716098 1464.5881449558779 1513.2668785066044 0.9756125871964733 0.5862588990289518 0.7503261487504501 0.44841715239114965 0.6853006138060821 0.7685952400055961 0.6398413614451292 0.850595600953152 0.8048364940581724 0.9678320233911641 1.0 10.563450727170284 -9.512112041186542 0.4918664547021284 0.9974722649197408 0.67811958194748 0.4094203752723893 0.12769217757655396 0.577600661169799 0.31534068208245225 0.07440982896152463 0.03790716304845857 3.075303332211851e-10 9.512112041186542 -0.3193526829722608 SHT(ph)DERPHK ddPTM_A549_PD325901_60min_R1 2 SHTDERPHK 9 1 A0A2R8Y595;A0A2R8YFL0;P49711 A0A2R8Y595 CTCF Transcriptional repressor CTCF 1 S(0.12)HT(0.88)DERPHK;S(0.046)HT(0.954)DERPHK 78.653 0.0010211999999999999 26150000.0 2144.8 2000.4 1853.65 2182.69 2235.81 1811.1499999999999 1880.9099999999999 1272.1100000000001 1930.83 2777.3999999999996 2597.0 True False 2362.5385170816917 2168.98072840441 1979.4498359029658 2317.509804051348 2078.774418725772 1796.4005948848687 1952.4890593234447 1246.7367680990103 1849.6839297421932 2602.03449000595 2277.5854637393873 1.0372996116698192 0.9523158462924733 0.8691001358311551 1.0175292391647126 0.9127097322235264 0.7887302687362172 0.8572626978913922 0.5473940661932799 0.8121249275561074 1.1424530633128802 1.0 11.153289475154683 -6.999271172718086 24.31314426452313 0.866090131039832 0.9612743531758381 0.11560148103198531 0.14218138654076312 35.262611116227575 1176194.0331923165 0.01983653264607193 0.03724090662052727 1.0016795957782745e-07 6.999271172718086 0.09518422213600608 SHT(ph)FLPK ddPTM_A549_PD325901_60min_R1 1 SHTFLPK 7 0 P09543 P09543 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase 1 S(0.279)HT(0.721)FLPK 82.279 0.013386000000000002 3210600.0 678.17 1022.2 766.18 725.07 1144.1 869.03 683.47 657.68 814.54 805.17 956.22 True False 747.0173191576328 1108.3443814112115 818.1775822146213 769.8559271465538 1063.7423629307295 861.9529078059779 709.4798248591349 644.5620564600207 780.307716439151 754.3314287888279 838.6110019780037 0.8907792974283285 1.3216430249507778 0.9756342097644953 0.9180131495183349 1.2684574378606004 1.0278340085843358 0.8460177879680907 0.7686067258117455 0.9304763646060752 0.8995009927244116 1.0 9.711857947212769 -7.5316067399211 24.33323069536298 0.939889259536329 1.081758156659055 0.26319666948153886 0.13831179898726328 177.03613321482914 493566.6062228387 0.020625062890847676 0.030619973398536855 2.9403109419217904e-08 7.5316067399211 0.1418688971227261 SHT(ph)GERPYR ddPTM_A549_MK2206_60min_R1 1 SHTGERPYR 9 1 Q9H5H4;H3BS42;K7ERP0;K7EJE2;Q96SL8 Q9H5H4 ZNF768;FIZ1 Zinc finger protein 768;Flt3-interacting zinc finger protein 1 1 S(0.019)HT(0.981)GERPYR 40.589 0.038488999999999995 2488500.0 641.48 491.4 364.73 412.48 471.84 372.62 443.7 454.07 642.85 819.84 695.91 True False 749.7461413197565 516.4101610608981 416.454198403907 513.5376185169308 402.4329610426683 412.05040107486224 524.314546654173 518.4358130310543 497.245501420505 634.6375745963911 523.0963408610825 1.4332850046046584 0.987218071934554 0.7961328838935691 0.9817266503366917 0.7693285722094958 0.7877141721094347 1.0023288363881215 0.9910904981243869 0.9505811120796147 1.2132326782322693 1.0 9.030932867953444 -5.26893078736329 4.629629546113852 0.9423792981576212 1.460736117120927 0.5744567886415877 0.12050520942742396 0.07535842198699362 4.277796217148601 0.012844391136068237 0.12483147541125834 5.383555723230949e-06 5.26893078736329 0.5183568189633058 SHT(ph)GERPYR ddPTM_A549_PD325901_60min_R1 1 SHTGERPYR 9 1 Q9H5H4;H3BS42;K7ERP0;K7EJE2;Q96SL8 Q9H5H4 ZNF768;FIZ1 Zinc finger protein 768;Flt3-interacting zinc finger protein 1 1 S(0.036)HT(0.964)GERPYR 45.879 0.016812999999999998 6193700.0 1661.0 1600.0 1367.4 1436.6 1531.8 1769.0 1464.2 1354.4 1350.2 2079.0 1658.6 True False 1829.6234972364282 1734.837615200489 1460.1999868441803 1525.3355192446782 1424.2116524231192 1754.5938505100798 1519.9209322409833 1327.3854294937553 1293.4557894469785 1947.7315851956407 1454.6027147316702 1.2578166386647627 1.1926539099856648 1.0038479730965872 1.0486268888382049 0.9791069671459006 1.2062357870917 1.0449045068098628 0.9125415593209706 0.8892158500375009 1.3390127527398006 1.0 10.50640945858529 -8.07369965895065 4.780175947836416 0.9441471034571993 1.105704074206007 0.0 0.14578686280860678 0.1658396672218193 7.068612400726472 0.014601353182600429 0.019143670411199912 8.439181767550661e-09 8.07369965895065 0.1615569707488076 SHT(ph)PSPTSPK ddPTM_A549_MK2206_60min_R1 1 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 S(0.09)HT(0.585)PS(0.313)PT(0.01)S(0.002)PK 49.418 0.030954000000000002 2101900.0 818.14 762.38 601.87 334.67 1012.5 910.08 571.56 669.92 1240.1 1243.8 1273.2 True False 956.2220303974333 801.1818856117371 687.224216251363 416.6641650239072 863.5625912506397 1006.3840615377885 675.4050536075251 764.8832115439557 959.2193300327726 962.8247161433841 957.029301467618 0.9991564823888394 0.8371550216729137 0.7180806430874112 0.4353724221243245 0.9023366263983289 1.0515707930723588 0.7057307990171063 0.7992265339953505 1.0022883610374271 1.0060556292966985 1.0 9.902419286309303 -8.761335120780155 23.242900489251895 1.0010806317834042 0.7998711210653979 0.24202127835147857 0.1547419634563552 1.176568999150205 262103.7697352768 0.027075935942123357 0.029756622296011396 1.7324666341573643e-09 8.761335120780155 -0.2012095107180063 SHT(ph)SLKDELSDVSQGGSK ddPTM_A549_MK2206_60min_R1 1 SHTSLKDELSDVSQGGSK 18 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9 A0A087X2D8 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.218)HT(0.552)S(0.218)LKDELS(0.011)DVSQGGSK 57.806000000000004 0.0036843 5659700.0 718.57 1049.6 871.28 752.54 1269.2 1103.5 939.38 1009.3 1454.8 1328.4 1643.7 True False 839.8470486502113 1103.0201567959275 994.8406053391717 936.9123337828041 1082.5023612990735 1220.2716375559833 1110.0531864683264 1152.371365851615 1125.2901228382207 1028.3135173861322 1235.5239261878144 0.6797497246706856 0.8927549952021369 0.8051973614211855 0.7583117687357374 0.8761484406369321 0.9876552057725894 0.8984473411966812 0.9326985430441926 0.9107797097141469 0.8322894406091949 1.0 10.27090723370052 -2.033551798360372 0.1620613631630474 1.004765594419528 2.026798199529785e-13 0.3803590647208833 0.07198576403970859 27.283393149225535 0.2713754284621483 0.0808263929959893 6.614008357641022 0.00925652975783678 2.033551798360372 -1.0047655944193252 SHTPS(ph)PTSPK ddPTM_A549_MK2206_60min_R1 3 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 S(0.006)HT(0.045)PS(0.945)PT(0.003)SPK;S(0.002)HT(0.017)PS(0.978)PT(0.002)S(0.001)PK;SHT(0.001)PS(0.965)PT(0.025)S(0.009)PK 72.2 0.002206 30677000.0 3222.71 2863.31 2482.3 2234.23 3832.38 2618.2599999999998 2787.33 2560.3 3327.8599999999997 4455.200000000001 4856.1 True False 3766.6246603052164 3009.0402488141617 2834.3274660653606 2781.616450298396 3268.64197872309 2895.322535339672 3293.7517812160804 2923.2303655899045 2574.1050235004136 3448.76722572922 3650.1963484581406 1.0318964517884786 0.824350243538322 0.7764863025142725 0.762045705150454 0.8954701793244023 0.7931963814940173 0.9023492072165861 0.8008419510979704 0.7051963176139079 0.9448169075030703 1.0 11.833758355045966 -11.067338261980254 1.4003953917328507 0.9993847558165939 0.8149393743817749 0.26204718030657015 0.08555649593590937 0.3621539615385004 1.2744342608464563 0.06187973472190255 0.013889117530762017 8.563705780636226e-12 11.067338261980254 -0.18444538143481903 SHTPS(ph)PTSPK ddPTM_A549_PD325901_60min_R1 1 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 S(0.046)HT(0.413)PS(0.511)PT(0.022)S(0.008)PK 77.062 0.0014288 3534100.0 2357.2 1837.3 2097.2 2035.2 2526.8 2230.6 2067.6 2051.5 2129.6 2232.7 2454.2 True False 2596.5012087210766 1992.1357190049116 2239.528603488089 2160.909681725441 2349.3262849867724 2212.4347331530735 2146.2836494341336 2010.5812231293842 2040.1003178834883 2091.726940965035 2152.348958455604 1.2063569889634298 0.9255635389320643 1.040504419457633 1.0039773863044863 1.0915173748928275 1.0279163722320304 0.99718200480566 0.9341334801825333 0.9478483077146288 0.9718344847138226 1.0 11.071696284406055 -7.821990569330016 3.167612030117374 0.9714784632186855 1.0439554295742963 0.27109058531624664 0.06554563687177174 0.2835984504211918 5.800683725228473 0.009700309571395385 0.013986192872399923 1.5066397823940548e-08 7.821990569330016 0.07247696635561085 SHTPSPT(ph)SPK ddPTM_A549_MK2206_60min_R1 2 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 SHTPS(0.005)PT(0.934)S(0.06)PK;SHT(0.002)PS(0.015)PT(0.603)S(0.379)PK 111.96 0.0001306 241440000.0 9719.400000000001 8896.900000000001 8917.0 6532.8 10882.9 9031.6 9440.1 8921.7 12884.0 12838.6 13418.7 True False 11359.797103484496 9349.71420826761 10181.564683924113 8133.336293268535 9282.039826490458 9987.317917309128 11155.243975366362 10186.378296560351 9965.794571520233 9938.351343205051 10086.466452720337 1.1262414996106729 0.9269563580163374 1.0094282999551472 0.8063613091257504 0.9202469338493736 0.9901701417561878 1.10596154041218 1.0099055347388846 0.9880362581122194 0.9853154610477747 1.0 13.300133229515701 -7.5056595266186115 24.15472261903446 1.0051802343030385 0.9510433026735725 0.10567033631519374 0.07831129763859772 893.0063006126475 1252689.490064453 0.011429685380120182 0.018016081773743052 3.121335655328556e-08 7.5056595266186115 -0.05413693162946598 SHTPSPT(ph)SPK ddPTM_A549_PD325901_60min_R1 3 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 SHT(0.002)PS(0.015)PT(0.603)S(0.379)PK;SHTPS(0.008)PT(0.743)S(0.248)PK;S(0.001)HT(0.001)PS(0.01)PT(0.649)S(0.339)PK 90.434 0.00058941 401946000.0 6799.299999999999 6944.9 7361.6 7064.6 8246.9 7657.4 7719.700000000001 7252.900000000001 8216.9 8260.2 9152.8 True False 7489.559930619893 7530.171096128669 7861.2024448969705 7500.964297129302 7667.666194260496 7595.0406732028805 8013.477407881925 7108.235219710021 7871.572268039464 7738.649562305446 8027.063624379612 0.9330385656683691 0.9380978460489846 0.9793372536653514 0.9344593051869612 0.9552267869127682 0.9461792043276447 0.9983074487591672 0.8855336835902301 0.9806291112645609 0.9640697924458701 1.0 12.970656617449569 -8.979957193029861 24.06029910316335 0.9914540952258522 0.9477597175406745 0.2230358781825844 0.028272128810467118 66.59381746642892 79943.71519455119 0.004467046064866762 0.004558494494154185 1.0472317651340651e-09 8.979957193029861 -0.0436943776851777 SHTPSPTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SHTPSPTSPK 10 0 B7Z385;A0A087X0J3;A0A087WZ15;E9PDI2;P40123-2;P40123 B7Z385 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 S(0.001)HT(0.004)PS(0.022)PT(0.368)S(0.605)PK 49.423 0.0089759 23304000.0 1142.3 1431.3 1504.5 1578.0 1740.7 1329.1 1230.5 1216.1 1568.9 1619.2 1618.0 True False 1258.2654550831862 1551.9206741477865 1606.6044172934548 1675.4694761019773 1618.4392370889966 1318.2762502617009 1277.327350855437 1191.8439314880056 1502.9645889967153 1516.9634356656002 1418.9962573470643 0.8867292274862104 1.0936749594035122 1.1322118779207635 1.1807427027569557 1.1405521534741805 0.9290202447230775 0.9001625932710425 0.8399204193225008 1.0591744560388319 1.069039772170854 1.0 10.470655068906252 -7.253754674813221 24.905464523695723 0.996094437209816 1.0949090154513683 0.2505156194305378 0.09610133352752383 774.9506120577541 2511546.7516042916 0.015007429426052129 0.02567246021233332 5.575005821113581e-08 7.253754674813221 0.09881457824155226 SHVEDGDIAGAPAS(ph)SPEAPPAEQDPVQLK ddPTM_A549_MK2206_60min_R1 1 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.5)S(0.5)PEAPPAEQDPVQLK 149.14 2.1081e-36 88840000.0 2934.1 3105.1 3117.8 1297.3 3400.8 3131.1 3360.3 2857.4 4331.1 4019.4 4168.1 True False 3429.304348142257 3263.136327045572 3559.9509220072423 1615.13855823801 2900.546825012518 3462.430923744034 3970.823013572269 3262.445200420496 3350.112765345493 3111.414748405464 3133.0457362921607 1.0945593000505338 1.041522084802812 1.1362588425601177 0.5155170700283056 0.9257914084730866 1.1051325818951139 1.2674002704702247 1.041301492228286 1.0692830706359948 0.9930958595222117 1.0 11.613350115028657 -7.249916131129949 23.666159301122608 1.058277084616107 0.935235770115801 0.13501144095829343 0.16714884253848514 667.9098354287448 1371732.6462664672 0.024904148559856225 0.04286254778712921 5.624499323399326e-08 7.249916131129949 -0.12304131450030598 SHVEDGDIAGAPAS(ph)SPEAPPAEQDPVQLK ddPTM_A549_PD325901_60min_R1 1 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.5)S(0.5)PEAPPAEQDPVQLK 135.37 5.3285e-28 118300000.0 5741.2 4695.9 4535.6 5479.9 6549.8 5851.7 6009.1 5543.3 6899.7 7220.2 6164.7 True False 6324.042397551942 5091.639973262482 4843.413090778459 5818.380977244125 6089.764643583335 5804.045695324952 6237.779588805695 5432.734532865278 6609.729603353072 6764.315339792957 5406.480981253061 1.169715091846345 0.9417660010120653 0.8958531635592475 1.076186339583793 1.1263823297815263 1.0735348400281892 1.1537596470671323 1.0048559408057203 1.222556710413348 1.2511493822410877 1.0 12.400474149920049 -6.5007799563998105 22.483684051333444 1.1021544207443774 0.994650631292768 0.20257368184858482 0.09717518868204199 276.00022489721925 280805.19460211624 0.01398732378852035 0.03218031735077947 3.1566035718052573e-07 6.5007799563998105 -0.10750378945160943 SHVEDGDIAGAPASS(ph)PEAPPAEQDPVQLK ddPTM_A549_MK2206_60min_R1 1 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.151)S(0.849)PEAPPAEQDPVQLK 134.63 6.0856e-28 77390000.0 2288.6 2082.5 1926.3 1722.3 2720.3 1681.2 1828.2 2163.8 3077.1 2743.9 3376.6 True False 2674.8597291020665 2188.4903549233213 2199.4783055560188 2144.263577316986 2320.147473559621 1859.103468109759 2160.3602753958953 2470.5252763595836 2380.1417631189797 2124.0510842786857 2538.0970305808682 1.0538839519818903 0.8622563789149007 0.8665855871761714 0.8448312067983667 0.9141287530006813 0.7324792731364904 0.8511732409621376 0.9733770011913925 0.9377662612742039 0.8368675660097108 1.0 11.309531508633068 -8.26692849533576 22.94990122177751 0.9699980991305294 0.8690883200253678 0.06407077778102377 0.08283420431410772 136.48314120315152 570633.5125760045 0.011733582946115961 0.014408124198392278 5.408433630812837e-09 8.26692849533576 -0.10090977910516152 SHVEDGDIAGAPASS(ph)PEAPPAEQDPVQLK ddPTM_A549_PD325901_60min_R1 1 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.165)S(0.835)PEAPPAEQDPVQLK 122.7 2.5555e-21 99266000.0 4482.3 3370.3 4164.5 4550.8 5610.6 4315.5 4412.1 4650.3 5034.1 5872.1 4975.6 True False 4937.339796305141 3654.3270090688775 4447.128013172876 4831.892580383324 5216.530811519232 4280.355998799465 4580.0048798937605 4557.546118410221 4822.534283554316 5501.334603861148 4363.632742927104 1.1314746421563417 0.8374506344494913 1.019134348641303 1.1073096351234437 1.19545596956448 0.980915730302322 1.0495853225314087 1.044438518754225 1.1051650236539803 1.2607235594650157 1.0 12.091313969675195 -5.996524723758108 24.999087961014784 1.059015959534686 0.9704201118086189 0.09067935191489918 0.1032504717410561 144.09261796390902 1036476.4806465793 0.011071794163611632 0.03418233714102568 1.0080342217973016e-06 5.996524723758108 -0.0885958477260671 SHVLPEGRS(ph)PGPPALK ddPTM_A549_MK2206_60min_R1 3 SHVLPEGRSPGPPALK 16 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(0.007)HVLPEGRS(0.993)PGPPALK;S(0.003)HVLPEGRS(0.997)PGPPALK;S(0.004)HVLPEGRS(0.996)PGPPALK 112.56 8.196099999999999e-08 34315200.0 6238.5 7569.5 6935.4 6097.3 6552.8 5232.0 5588.4 3377.8 8552.3 10689.6 11923.2 True False 7291.406283318725 7954.755218051423 7918.944006828218 7591.138773718199 5588.89180044167 5785.646767279481 6603.73994257872 3856.613494078657 6615.217705216744 8274.811935750373 8962.340376420596 0.8135605184670287 0.8875756648319147 0.8835799215640712 0.8470040697952123 0.6235973602548865 0.645550885625945 0.736832084614057 0.43031321419404983 0.738112750395087 0.923286952760791 1.0 13.12965980361502 -10.440433221765046 1.011288261897346 0.985520783386104 0.7358965878698936 0.3105520431349138 0.12889043297465771 0.4415754536775029 0.8689833479620329 0.06820729914207894 0.025140415912631858 3.6271605410933134e-11 10.440433221765046 -0.2496241955162104 SHVLPEGRS(ph)PGPPALK ddPTM_A549_PD325901_60min_R1 2 SHVLPEGRSPGPPALK 16 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(0.001)HVLPEGRS(0.999)PGPPALK;S(0.076)HVLPEGRS(0.924)PGPPALK 103.41 4.4477e-07 60882000.0 4326.5 4313.0 3563.8 5956.6 4893.5 4516.0 4812.7 5521.7 6638.8 4580.2 6346.0 True False 4765.723094999038 4676.471646474818 3805.6608988703297 6324.525653579878 4549.797441658534 4479.223193275028 4995.849932110493 5411.5653618101505 6359.794323048881 4291.005390338178 5565.482230608448 0.8563001187550326 0.8402635122533778 0.6837971520132362 1.1363841247748352 0.8175028242181857 0.804822117415212 0.897649067071825 0.9723443787221524 1.142721162251127 0.7710033403285276 1.0 12.442290982393912 -8.396862862577366 2.8438530113123095 1.0670752581487217 0.8600197316132125 0.008901674012831262 0.13908738954751376 0.19422555035378455 3.0406410049848627 0.018537357299230305 0.022603660376798833 4.00993319532781e-09 8.396862862577366 -0.20705552653550918 SHVT(ph)EEEEEEEEEESDS ddPTM_A549_PD325901_60min_R1 1 SHVTEEEEEEEEEESDS 17 0 O75971-2;O75971 O75971-2 SNAPC5 snRNA-activating protein complex subunit 5 1 S(0.018)HVT(0.982)EEEEEEEEEESDS 55.841 0.011012000000000001 813090.0 0.0 0.0 0.0 0.0 157.28 187.19 0.0 146.15 148.15 171.99 160.86 True False 0.0 0.0 0.0 0.0 146.23319538654417 185.66558670264666 0.0 143.234923597543 141.92377070550285 161.13052204800294 141.07523977555547 0.0 0.0 0.0 0.0 1.0365617355617809 1.3160749327666037 0.0 1.0153087375603507 1.0060147402995547 1.1421601856169414 1.0 7.140320991405267 -6.7583758701395285 24.99999919449755 0.952759354435571 1.0336125934727282e-05 0.6685998247080445 0.31502157166986877 34.22900342335719 279323.24859223986 0.043185089734151215 0.0869595113291343 1.7443118446787132e-07 6.7583758701395285 -0.9527490183096363 SHVTEEEEEEEEEES(ph)DS ddPTM_A549_MK2206_60min_R1 1 SHVTEEEEEEEEEESDS 17 0 O75971-2;O75971 O75971-2 SNAPC5 snRNA-activating protein complex subunit 5 1 SHVTEEEEEEEEEES(0.5)DS(0.5) 177.81 2.4393e-30 6072600.0 172.81 351.97 454.45 0.0 499.09 436.2 262.0 332.16 543.37 443.41 661.58 True False 201.97610320113958 369.88376961457914 518.8978435134362 0.0 425.6745221405249 482.3583944738741 309.60200861706835 379.2446971973375 420.29756258358805 343.24337303838064 497.2914273208822 0.4061523929524981 0.7437967945824009 1.04344819758699 0.0 0.855986045112043 0.9699712642796627 0.6225766052011482 0.7626206211526468 0.8451735531575671 0.6902257995629985 1.0 8.957947750880708 -8.650935774432 0.21335018159370459 1.0901692323812942 0.5146730311051754 0.05515050523180953 0.2794705973433548 2.6992026367089634 0.5096289111769107 0.5499186468122513 0.5424525736245103 2.2339025587164388e-09 8.650935774432 -0.5754962012761188 SHVTEEEEEEEEEES(ph)DS ddPTM_A549_PD325901_60min_R1 2 SHVTEEEEEEEEEESDS 17 0 O75971-2;O75971 O75971-2 SNAPC5 snRNA-activating protein complex subunit 5 1 SHVTEEEEEEEEEES(0.623)DS(0.377);SHVTEEEEEEEEEES(0.604)DS(0.396) 189.3 1.5507999999999997e-39 19465500.0 319.48 291.5 374.01 460.48 697.22 795.98 714.79 565.27 663.4300000000001 419.75 881.6500000000001 True False 351.91337441125455 316.0657280193391 399.3925677048353 488.92280377404217 648.2496724784226 789.4978027863284 741.991724598096 553.9952464042639 635.548344239971 393.2469133650168 773.2126392398271 0.4551314302844727 0.40876947941522856 0.5165365223433134 0.6323264506575055 0.8383847334877246 1.0210616882343153 0.959621825798883 0.7164849852285347 0.8219580384314478 0.5085883150482794 1.0 9.594721410380759 -6.571173107742543 1.8486606632665346 0.908645115876732 0.4443742470732007 0.5437066748043922 0.14566623390751907 0.11006665233664283 0.748422261291387 0.014620777478310589 0.03915906165917891 2.684274293256583e-07 6.571173107742543 -0.4642708688035313 SHVTEEEEEEEEEESDS(ph) ddPTM_A549_MK2206_60min_R1 1 SHVTEEEEEEEEEESDS 17 0 O75971-2;O75971 O75971-2 SNAPC5 snRNA-activating protein complex subunit 5 1 SHVTEEEEEEEEEES(0.462)DS(0.538) 175.88 3.9751999999999995e-30 4401100.0 216.37 223.05 224.66 0.0 267.15 391.71 174.8 174.27 509.01 0.0 309.86 True False 252.88796626138864 234.40229227642104 256.520166187102 0.0 227.85258889146502 433.16049220394575 206.55889735215106 198.97330617949174 393.7200477219434 0.0 232.91321029905438 1.0857605111220923 1.0063932911982738 1.1013551608246561 0.0 0.9782725015850683 1.859750641227173 0.8868492134342012 0.8542808968371322 1.6904152719221777 0.0 1.0 7.86364865797292 -7.009259845355685 24.985899082454832 1.2961854162534405 0.7916592802019492 0.0 0.5607562500070087 516.5891989801656 1393921.4771914617 0.06286203474134676 0.1143926750979561 9.789041161219502e-08 7.009259845355685 -0.5045261360514913 SHWDDST(ph)SDSELEK ddPTM_A549_MK2206_60min_R1 2 SHWDDSTSDSELEK 14 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 SHWDDS(0.092)T(0.826)S(0.075)DS(0.007)ELEK;SHWDDS(0.072)T(0.515)S(0.394)DS(0.018)ELEK 95.06700000000001 4.5783999999999994e-05 14557700.0 2659.3999999999996 2233.3999999999996 1971.84 1413.77 3207.0 2324.5 2540.5 2688.6 3170.6000000000004 3178.3 3469.8999999999996 True False 3108.2417039124507 2347.0705203773095 2251.4765623358644 1760.143713466547 2735.254548287213 2570.477047121779 3002.075965235353 3069.717283492176 2452.464162407798 2460.319822574783 2608.228065631862 1.1917062563926735 0.899871660497877 0.8632207405491696 0.6748427166548948 1.0487022144762397 0.9855261819288269 1.15100209402435 1.1769359144398728 0.9402797994253125 0.9432916756758971 1.0 11.348854310201313 SHWDDST(ph)SDSELEK ddPTM_A549_PD325901_60min_R1 1 SHWDDSTSDSELEK 14 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 SHWDDS(0.011)T(0.915)S(0.074)DSELEK 149.3 2.1329000000000002e-13 15523000.0 2919.4 2537.9 2355.9 2826.3 2361.4 2912.0 2359.0 2433.8 3258.4 3637.3 2859.6 True False 3215.7753388513083 2751.7777397608243 2515.7855411775677 3000.8741320069826 2195.543410387751 2888.285637470523 2448.7730358943313 2385.2559497208367 3121.460779391229 3407.640257254499 2507.8873284979395 1.282264678444445 1.0972493494789335 1.0031493490915155 1.1965745422081262 0.8754553625432359 1.151680781129995 0.9764286489540924 0.9511017192105872 1.2446575027199407 1.3587692790391235 1.0 11.29225681850034 -5.267384841066035 5.162308590315382 1.0826903267109413 1.2904444645736821 0.1469276580157547 0.1364921181002852 0.20236261972034067 17.852666113379698 0.01638638589855252 0.14797935123186187 5.4027535693917805e-06 5.267384841066035 0.20775413786274077 SHWDDSTS(ph)DSELEK ddPTM_A549_PD325901_60min_R1 1 SHWDDSTSDSELEK 14 0 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 SHWDDS(0.018)T(0.13)S(0.851)DSELEK 119.0 8.492700000000001e-07 12751000.0 2750.1 2938.1 2396.0 2944.4 3128.8 3533.6 2373.5 2573.8 3765.0 3319.8 4374.7 True False 3029.288127483382 3185.703998262848 2558.606968318455 3126.268900782423 2909.0438817740283 3504.8235331613478 2463.8248413290344 2522.463539892959 3606.7701431401815 3110.1872614393897 3836.639633508158 0.7895680639449195 0.8303370403724611 0.6668874881999038 0.8148455939094326 0.7582270318971939 0.9135138735864532 0.6421830238656412 0.6574668931276355 0.9400857228392369 0.8106539989515479 1.0 11.90562754703142 -8.886300979438928 6.262625012738298 0.9738199726233817 0.7618409330488558 0.3281241954666444 0.09197798456542366 0.10326553188908182 5.29910088371947 0.013630716412839632 0.014446098946109097 1.2992688326684869e-09 8.886300979438928 -0.2119790395745259 SHY(ph)ADVDPENQNFLLESNLGK ddPTM_A549_PD325901_60min_R1 1 SHYADVDPENQNFLLESNLGK 21 0 F8VUY8;Q96QD8 F8VUY8 SLC38A2 Sodium-coupled neutral amino acid transporter 2 1 S(0.386)HY(0.614)ADVDPENQNFLLESNLGK 100.28 5.6339e-10 2341800.0 2915.0 2722.1 2875.5 2949.3 3551.5 3187.0 2552.4 3078.7 3535.7 3148.3 3453.7 True False 3210.9286540904186 2951.500920210781 3070.648721786194 3131.471562653714 3302.054892009865 3161.0461286464815 2649.5329787268734 3017.2929133065736 3387.106824727953 2949.5158007077616 3028.916794808132 1.0600914028388873 0.9744410692528597 1.013777838681338 1.033858562249505 1.0901768241603464 1.0436226356778213 0.8747460423041132 0.9961623635480898 1.118256807362221 0.9737856800039962 1.0 11.564586232103252 SIDAVIATAS(ph)APPSSSPGR ddPTM_A549_PD325901_60min_R1 1 SIDAVIATASAPPSSSPGR 19 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 SIDAVIAT(0.02)AS(0.391)APPS(0.196)S(0.196)S(0.196)PGR 56.958999999999996 0.0021557 1697500.0 553.42 760.13 541.47 915.53 708.53 778.97 735.48 705.76 765.26 669.39 803.85 True False 609.6027909937288 824.1888227764665 578.2174103236201 972.0802087805098 658.7652970958047 772.6263265866801 763.4690938700986 691.6830631419906 733.0987834633355 627.1246011611878 704.9815460249922 0.86470744437347 1.1690927619646492 0.820188008585294 1.3788732687565253 0.9344433209780089 1.0959525549897016 1.0829632324064167 0.9811364099415304 1.0398836502840125 0.889561726398659 1.0 9.461441683021361 -9.91002169467298 0.5745868676631962 1.001364488021753 1.0496088527982335 0.03118132922929373 0.148774688915449 3.8020161991826047 2.533962665043366 0.0836189287899319 0.0322587335665467 1.2302073157095797e-10 9.91002169467298 0.04824436477648053 SIDAVIATASAPPS(ph)SSPGR ddPTM_A549_MK2206_60min_R1 1 SIDAVIATASAPPSSSPGR 19 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 SIDAVIAT(0.006)AS(0.034)APPS(0.32)S(0.32)S(0.32)PGR 57.826 0.0017925 1209800.0 344.27 371.34 429.71 320.17 457.65 448.92 309.1 342.62 676.84 731.46 365.04 True False 402.3743594066102 390.23961987862015 490.64933950084435 398.6116643729776 390.33029124528923 496.4244164310213 365.25946894479335 391.187434229744 523.5368206913813 566.222677978967 274.3904934085292 1.466429665285564 1.422205321441686 1.7881426335362713 1.4527167447434135 1.4225357678997348 1.8091895614324893 1.3311666319320068 1.4256595750470131 1.9079991226660609 2.0635652166561775 1.0 8.100086688231674 -11.034815615015637 1.3313520095818028 1.0001999531209014 1.591638759889123 0.0 0.36240876681438433 0.27031340142551696 0.854348576324916 0.14295807283399894 0.03212792999770348 9.229631991922734e-12 11.034815615015637 0.5914388067682217 SIDAVIATASAPPS(ph)SSPGR ddPTM_A549_PD325901_60min_R1 1 SIDAVIATASAPPSSSPGR 19 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 SIDAVIAT(0.004)AS(0.024)APPS(0.324)S(0.324)S(0.324)PGR 67.11 0.0005165 1646200.0 601.86 667.31 745.96 668.41 733.41 776.16 671.59 698.83 871.42 1015.0 755.33 True False 662.9603841340854 723.5465556246487 796.5853314218841 709.6961676307494 681.897811727145 769.8392102950276 697.1477249581488 684.8912874284702 834.7972478446793 950.9127267790161 662.429198431371 1.0008018754366086 1.0922624747490046 1.2025214669102664 1.0713539942250527 1.0293897269955425 1.1621456483470278 1.0524109242300779 1.0339086638244348 1.2602059960845249 1.4354933765461617 1.0 9.371622454857963 SIDAVIATASAPPSSS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 SIDAVIATASAPPSSSPGR 19 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 SIDAVIATASAPPSS(0.006)S(0.994)PGR;SIDAVIATASAPPS(0.01)S(0.088)S(0.902)PGR 275.69 3.596899999999999e-126 12975200.0 3285.6000000000004 3551.3999999999996 3724.1 3010.3 4882.5 3422.2 3530.2 4090.6 6327.1 5732.0 5686.8 True False 3840.128954792339 3732.151090744146 4252.233378872018 3747.8236351375017 4164.290717808641 3784.3349325274894 4171.591644351051 4670.455076937102 4894.021952302522 4437.13721895311 4274.61061230447 0.8983576056585189 0.8730973249355499 0.9947650826093869 0.8767637511471544 0.9741918259926943 0.885305183502394 0.9758998006375414 1.0926036311923226 1.144904740145237 1.0380213828555067 1.0 12.06157729102714 -8.078904649468932 3.8213744788041284 1.0718717641843096 0.9196737580596954 0.6741138200337444 0.049157299729040003 0.12835535614072027 3.560399053160994 0.009927649556411832 0.01313901358740692 8.338642416788016e-09 8.078904649468932 -0.1521980061246142 SIDAVIATASAPPSSS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 SIDAVIATASAPPSSSPGR 19 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 SIDAVIATASAPPS(0.064)S(0.388)S(0.547)PGR;SIDAVIATASAPPS(0.001)S(0.096)S(0.903)PGR 270.49 3.9312999999999995e-111 17326800.0 5549.0 6484.2 6277.1 5305.799999999999 7642.5 7214.799999999999 6071.4 6266.1 7048.9 7520.0 7347.8 True False 6112.330395042103 7030.646290301875 6703.101753268685 5633.5272156539095 7105.717165193688 7156.045060859313 6302.450449397558 6141.117719839646 6752.659246210051 7045.1859166287695 6444.067181541884 0.9485205884491718 1.091026224934489 1.040197372936888 0.874219193708959 1.1026758357744946 1.1104857940272237 0.9780237033297905 0.9529878486416167 1.0478877789406178 1.093282505931767 1.0 12.653755819360214 SIDDEITEAKS(ph)GTAT(ph)PQR ddPTM_A549_PD325901_60min_R1 1 SIDDEITEAKSGTATPQR 18 1 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 2 S(0.001)IDDEIT(0.048)EAKS(0.688)GT(0.383)AT(0.88)PQR 92.336 2.5009e-06 71933000.0 6613.9 7918.3 7236.8 7942.7 9320.6 7779.8 7799.2 8343.8 7746.9 9425.1 9231.7 True False 7285.3382591041545 8585.602930276265 7727.9327664136035 8433.302539819504 8665.953210324411 7716.443888184467 8096.002823886001 8177.3763634155275 7421.32473357043 8829.99757750237 8096.259424567918 0.8998400220473368 1.0604406899590502 0.954506564224383 1.0416294856151516 1.070365060688121 0.9530875288863757 0.9999683062673191 1.0100190636927298 0.9166362321655092 1.090626808561487 1.0 12.983039803022036 -8.715329750551025 24.999733884991233 0.9606336763241338 1.001652284264386 0.0 0.06408746626483622 204.57895868919408 110918.500152173 0.008789622059896295 0.009966477244416388 1.926061940046931e-09 8.715329750551025 0.04101860794025225 SIDDEITEAKS(ph)GTATPQR ddPTM_A549_MK2206_60min_R1 2 SIDDEITEAKSGTATPQR 18 1 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 SIDDEITEAKS(0.965)GT(0.035)ATPQR;SIDDEITEAKS(0.981)GT(0.019)ATPQR 246.22 1.1922999999999999e-75 78514000.0 8763.8 9768.7 9169.6 8477.2 7419.0 5964.799999999999 7088.6 5487.4 8683.7 14430.0 13431.3 True False 10242.915185661408 10265.885104508736 10469.987162241849 10554.114380555968 6327.67492788987 6595.991176886208 8376.50686367539 6265.2557544576985 6716.855815019425 11170.252977929746 10095.937524978028 1.0145580992671308 1.0168332637865722 1.0370495198032275 1.0453822990132793 0.6267545646191626 0.6533312196680381 0.8296908378198011 0.6205719616387319 0.6653028308070917 1.1064106676862637 1.0 13.301487267418835 -6.735181672425166 24.99026656494751 0.7936555839694114 1.0282395920608305 0.38699079678888837 0.14658549489660314 200.1190486211885 190458.447830379 0.02208818737094769 0.04596899519408587 1.8400021377215813e-07 6.735181672425166 0.2345840080914191 SIDDEITEAKS(ph)GTATPQR ddPTM_A549_PD325901_60min_R1 2 SIDDEITEAKSGTATPQR 18 1 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 SIDDEITEAKS(0.999)GT(0.001)ATPQR;SIDDEIT(0.001)EAKS(0.979)GT(0.02)ATPQR 233.3 1.9904999999999995e-65 126923000.0 27852.0 27800.0 23833.0 28756.0 32392.0 31363.0 31863.0 33617.0 31314.0 32804.0 36748.0 True False 30679.514536441275 30142.803564108483 25450.45069947152 30532.192810385586 30116.89766633352 31107.59012636952 33075.56390110262 32946.48256297367 29997.981477368325 30732.749841634348 32228.228964765112 0.9519454069282852 0.9352919639817437 0.789694361650971 0.9473742055068 0.934488137690101 0.9652280353468762 1.026291700275057 1.0222864743512223 0.9307983231149592 0.9535972291631116 1.0 14.976037289822383 -6.85406263826739 2.036895753936945 0.9754683572614502 0.8967876424585332 0.36027801032331974 0.04842409773613711 0.29842771267835916 2.514718200366878 0.00766225377453483 0.01683913600473878 1.3993854747326197e-07 6.85406263826739 -0.07868071480291705 SIDDEITEAKSGT(ph)AT(ph)PQR ddPTM_A549_MK2206_60min_R1 1 SIDDEITEAKSGTATPQR 18 1 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 2 SIDDEITEAKS(0.28)GT(0.722)AT(0.998)PQR 106.73 1.2106e-09 29911000.0 1390.9 1984.0 1459.0 1266.2 2120.3 1953.3 1661.4 1987.8 2704.6 2753.7 2750.7 True False 1625.6499157598814 2084.977125650837 1665.9081388185798 1576.4190568418785 1808.4066787444262 2159.9969095043975 1963.2548744900669 2269.576737382188 2092.0124183587104 2131.637257472292 2067.6252745420798 0.7862401063557887 1.008392164345447 0.8057108603431689 0.7624297672560665 0.8746297992245896 1.0446752301297804 0.9495216075479983 1.0976731448036854 1.0117947599678243 1.0309591799434688 1.0 11.013759027594462 -7.180322685980638 5.23377884869387 1.0110760374417866 0.8471541249496591 0.6159660547991912 0.06865254814019425 0.12069964144259189 5.75624672660403 0.009586510355460492 0.016755571474617207 6.602027272227635e-08 7.180322685980638 -0.1639219124921275 SIDIS(ph)ATIPK ddPTM_A549_MK2206_60min_R1 1 SIDISATIPK 10 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 S(0.001)IDIS(0.989)AT(0.009)IPK 91.584 0.00063794 589720.0 958.89 774.14 686.72 525.37 1110.6 800.95 855.48 1079.7 1055.2 907.8 1195.6 True False 1120.7271893903176 813.5404193807151 784.1072221312506 654.0856735847556 947.2322112029238 885.7059973724199 1010.9096424875182 1232.7507814425737 816.198884808146 702.727349505518 898.6995231186653 1.2470543942219667 0.9052418505326104 0.8724909738576953 0.7278135313958427 1.0540032422804015 0.9855418575263563 1.124858327485767 1.3717051692257323 0.9081999754220123 0.781938046508487 1.0 9.811695026351478 SIDKDEEFAGS(ph)SPQSSK ddPTM_A549_MK2206_60min_R1 2 SIDKDEEFAGSSPQSSK 17 1 A0A590UJ38;H3BQ24;A0A590UJL5;Q9Y2M0-2;Q9Y2M0 A0A590UJ38 FAN1 Fanconi-associated nuclease 1 1 SIDKDEEFAGS(0.573)S(0.426)PQSSK;SIDKDEEFAGS(0.579)S(0.421)PQSSK 105.32 3.3208000000000004e-09 18011600.0 8699.4 9901.0 9795.3 9682.2 11850.7 8777.400000000001 8910.7 8148.400000000001 14025.5 14138.9 15370.0 True False 10167.64604009024 10404.918609409744 11184.420830822222 12054.339434650481 10107.47772852736 9706.218642033436 10529.65884803096 9303.460653428427 10848.746644121165 10944.912670107478 11553.204809580027 0.8800714786653078 0.9006088596976907 0.9680795082545403 1.0433762435038725 0.8748635460998789 0.8401321366678229 0.9114058844780166 0.8052709881602643 0.9390248699759293 0.9473486232176765 1.0 13.496005484138879 -9.664759076253539 1.3068938934306118 0.9867797222527522 0.9075705787684754 0.1421283372573775 0.06160130842121075 0.4308217713428263 1.496901249911735 0.01686050952445776 0.012127986758431474 2.1639186191078432e-10 9.664759076253539 -0.07920914348427688 SIDKDEEFAGSS(ph)PQSSK ddPTM_A549_PD325901_60min_R1 1 SIDKDEEFAGSSPQSSK 17 1 A0A590UJ38;H3BQ24;A0A590UJL5;Q9Y2M0-2;Q9Y2M0 A0A590UJ38 FAN1 Fanconi-associated nuclease 1 1 SIDKDEEFAGS(0.087)S(0.896)PQS(0.013)S(0.004)K 108.14 2.3672e-09 14446000.0 6512.6 6832.8 6351.6 6078.7 7353.7 6601.5 8002.0 7824.1 6636.5 6901.8 7436.3 True False 7173.754357677279 7408.624035713683 6782.657771273578 6454.16749327065 6837.201480887777 6547.739572720346 8306.520488862416 7668.042187612295 6357.590984050421 6466.019170131444 6521.682242589606 1.0999852631318556 1.1359989279042049 1.0400165967884298 0.989647648136235 1.0483800385485946 1.0039954921386038 1.2736775849974702 1.1757767248358755 0.974839120883935 0.991464921106604 1.0 12.671028434701544 -8.789024248586609 24.987805362464723 0.9881184513202312 1.093138387349408 0.2773632250004686 0.07694044634320281 214.6335217717736 194425.09512510494 0.014148713377874591 0.015064085040261074 1.6254579966894481e-09 8.789024248586609 0.10501993602917681 SIDTQT(ph)PGGADR ddPTM_A549_MK2206_60min_R1 2 SIDTQTPGGADR 12 0 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 SIDT(0.003)QT(0.997)PGGADR;SIDT(0.005)QT(0.995)PGGADR 92.85600000000001 0.00028188 4988600.0 1405.21 1725.87 1497.95 1382.69 1682.26 1250.6799999999998 1727.67 1299.47 1896.51 2155.55 2622.0 True False 1642.3750939139716 1813.7094112132122 1710.3818345053398 1721.449112071314 1434.801782476347 1383.0261274658058 2041.5652756772922 1483.6738519599705 1466.9535131041484 1668.6097579055072 1970.8850364813827 0.8333185667927647 0.9202512463391697 0.8678242529857964 0.8734396376282879 0.7279987193154076 0.7017284630335008 1.035862182667993 0.7527957361778801 0.7443120658742722 0.8466296750035065 1.0 10.9446279097825 -10.970550727060024 1.2472328887062483 0.9997014336654372 0.8225450690915245 0.042264953665524185 0.10239983397307076 0.44118182524763594 1.223973874016154 0.06601344849940906 0.01536396268112037 1.0701613771533061e-11 10.970550727060024 -0.1771563645739127 SIDTQT(ph)PGGADR ddPTM_A549_PD325901_60min_R1 2 SIDTQTPGGADR 12 0 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 SIDT(0.001)QT(0.999)PGGADR;SIDT(0.006)QT(0.994)PGGADR 97.69 0.00026823 6000900.0 2316.0 2070.4700000000003 2083.3 1902.56 1911.14 2198.1 1903.1100000000001 1842.44 2107.23 1957.92 2074.29 True False 2551.118615050911 2244.9557732150965 2224.6852659005995 2020.0768101727367 1776.908119475076 2180.199402377731 1975.533892471751 1805.691088833781 2018.6704511897192 1834.2965970592822 1819.1654800076894 1.4023565437489105 1.23405803259064 1.2229152819518079 1.1104414812027974 0.9767710189111357 1.1984612869679758 1.0859561233887314 0.9925930920952548 1.1096684020088081 1.0083176144324864 1.0 10.829061068073582 -2.000000000000068 0.42636833591422807 1.04725901803583 8.002933354409672 0.7497581198686538 0.06299095670902247 25.56771845635427 0.28497191024484747 0.013599245457184763 154.04162257955895 0.009999999999998435 2.000000000000068 6.955674336373842 SIEEGDGAFGRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SIEEGDGAFGRSPR 14 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.001)IEEGDGAFGRS(0.999)PR;SIEEGDGAFGRS(1)PR 76.71300000000001 0.00021448 18050600.0 2119.47 1990.62 2171.4 1944.87 3014.1 2175.36 2159.08 2179.31 3998.2 3519.5 3488.5 True False 2477.184719933566 2091.934055374531 2479.3371710970955 2421.3632373085316 2570.7298827541254 2405.5551513129 2551.356888415802 2488.233866356964 3092.614083813429 2724.4425056010937 2622.209172297978 0.944693789535745 0.7977754320572605 0.9455146436408517 0.9234058300492348 0.9803679698447784 0.9173772926760022 0.9729799267614931 0.9489074680401622 1.1793925963210672 1.0389874821517473 1.0 11.356567057864993 -8.632080222953181 7.219825818597502 1.08453728367361 0.9261596924907867 0.5260074456606271 0.060828443367181476 0.1430148855678007 8.699879345505149 0.01295452002681371 0.014686086016996162 2.3330270653049333e-09 8.632080222953181 -0.15837759118282335 SIEEGDGAFGRS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SIEEGDGAFGRSPR 14 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 SIEEGDGAFGRS(1)PR;SIEEGDGAFGRS(1)PR 106.16 5.5438e-06 24135000.0 4004.9 3916.7000000000003 4108.1 4759.200000000001 4873.1 4407.3 3955.3 4100.9 4129.5 4548.9 4665.2 True False 4411.474499748447 4246.774054659845 4386.900370012124 5053.164975072579 4530.83026728235 4371.4084100356595 4105.821105923206 4019.1043324061834 3955.9514757230754 4261.681677679871 4091.4099751393874 1.0782284167448057 1.0379732367238912 1.0722221426520988 1.2350668854446507 1.1074006992242307 1.06843568271027 1.0035222895948792 0.982327451129915 0.9668919760573012 1.0416168762297362 1.0 11.998382392766986 -7.69040320688497 2.4656683151281484 0.9839921042368934 1.106857657978841 0.5095948162636145 0.04968118993021594 0.15643679968698854 1.945161529632913 0.007813912798888597 0.011939085158711303 2.039843237754426e-08 7.69040320688497 0.12286555374194752 SIEEQLGTEIKPIPS(ph)NIDK ddPTM_A549_PD325901_60min_R1 1 SIEEQLGTEIKPIPSNIDK 19 1 P26196 P26196 DDX6 Probable ATP-dependent RNA helicase DDX6 1 SIEEQLGTEIKPIPS(1)NIDK 88.47399999999999 1.7266e-06 2055800.0 1371.4 1687.4 1616.8 1640.0 1673.3 2089.6 1744.2 2087.3 1478.1 1606.6 1866.2 True False 1510.6235184286802 1829.6031199308145 1726.525770608214 1741.2990752897608 1555.7731805716185 2072.5829904046714 1810.5764854628621 2045.6671640448276 1415.9805972312097 1505.1590018159286 1636.6692308164968 0.9229864470996774 1.1178820286235034 1.0549020767909774 1.0639285217215617 0.9505727554953048 1.266342002024873 1.106256811927482 1.249896512702381 0.8651599055997462 0.9196476438095187 1.0 10.67654706873549 -8.78331124563996 24.999643309395545 0.9363255119776263 1.0919395717229328 0.3327276041518821 0.10283612847283147 206.58477479186809 236126.28878090507 0.018263267565616203 0.019450862521639745 1.6469816268513102e-09 8.78331124563996 0.1556140597453065 SIELFYK ddPTM_A549_PD325901_60min_R1 1 SIELFYK 7 0 P78527;P78527-2 P78527 PRKDC DNA-dependent protein kinase catalytic subunit 0 92.925 0.033832 808040.0 1358.1 1111.1 1301.4 1267.9 1515.1 1827.2 1349.4 1103.3 1527.6 1827.4 1778.5 False True 1495.9733122196217 1204.736296405789 1389.7208299539386 1346.2153033901766 1408.6846028112482 1812.3198890062288 1400.7521554200132 1081.2938159778944 1463.4002843720966 1712.0176521339654 1559.7557748403913 0.959107404088761 0.7723877775218168 0.890986173842599 0.8630936490861423 0.9031443419117315 1.1619254233514105 0.8980586435484434 0.693245592303412 0.9382239886381222 1.0976190502062126 1.0 10.607104435538124 -14.99999999999994 0.14473439222644147 1.3883439475699255 0.8642444911784635 0.17291328824472052 0.1150648611596409 111.0633867681268 1.069600870883369 12.108436986481896 0.24678119749364852 1.0000000000001391e-15 14.99999999999994 -0.524099456391462 SIFAS(ph)PESVTGK ddPTM_A549_MK2206_60min_R1 3 SIFASPESVTGK 12 0 O75940 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 1 SIFAS(0.979)PES(0.021)VTGK;SIFAS(0.963)PES(0.034)VT(0.003)GK;SIFAS(0.62)PES(0.364)VT(0.016)GK 153.38 6.4891e-13 18790200.0 7408.4 7551.9 7197.2 7664.9 10834.9 7490.0 6724.400000000001 7595.700000000001 13193.0 10906.3 11479.5 True False 8658.756802009855 7936.2594532271 8217.87118348532 9542.800844090432 9241.100562905238 8282.586828540389 7946.136437956542 8672.413735855662 10204.806564891847 8442.559255245686 8628.82333191763 1.00346900949768 0.9197383174912426 0.9523744857642158 1.1059214538316064 1.0709572102053384 0.9598744243497802 0.92088296773491 1.005051720525647 1.1826417313638495 0.9784137338884941 1.0 13.07494812460553 -8.553484005721886 24.47988123032027 1.086647478354237 0.9905161970879851 0.07830712699642195 0.07425149770885708 183.12097801550058 146469.9813258409 0.014406754624789192 0.01633581954313638 2.7958636922739087e-09 8.553484005721886 -0.09613128126625192 SIFAS(ph)PESVTGK ddPTM_A549_PD325901_60min_R1 2 SIFASPESVTGK 12 0 O75940 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 1 SIFAS(0.988)PES(0.012)VTGK;S(0.001)IFAS(0.998)PES(0.001)VTGK 181.67 4.1269e-19 48693000.0 12138.8 11282.2 12540.7 12914.0 13673.8 15626.6 13999.3 14643.599999999999 13922.2 12890.5 14585.9 True False 13371.12203988775 12232.990588884351 13391.787315355285 13711.668450178044 12713.39946004913 15499.342150582717 14532.05102221089 14351.521910318022 13337.098349754659 12076.591630093506 12791.92676763817 1.0452781885614657 0.9563055520167728 1.0468936821335375 1.0719001679142421 0.9938611822116037 1.2116503191523844 1.136033006300114 1.121920268229288 1.042618410191004 0.9440791719231567 1.0 13.642945964234892 -4.762611977860268 16.497237781660125 1.0449495770933037 3.7520166481741373 0.0 0.07711175738432412 99143.6943462995 6003537.168449817 0.010217185421632849 1311553.3378285551 1.72738053778791e-05 4.762611977860268 2.7070670710808336 SIFASPES(ph)VTGK ddPTM_A549_MK2206_60min_R1 1 SIFASPESVTGK 12 0 O75940 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 1 SIFAS(0.425)PES(0.491)VT(0.084)GK 104.87 0.00017183 12524000.0 1355.6 2172.9 1560.0 1364.5 1996.8 1648.2 1907.5 1381.9 2484.0 2630.6 2305.6 True False 1584.3921387620217 2283.4913287937025 1781.2314575441972 1698.8025612547333 1703.0733651449643 1822.6114300133868 2254.068058920068 1577.788556891259 1921.3779661329 2036.3456329689532 1733.0558886771444 0.9142187214581989 1.317609745717266 1.027798046896125 0.9802353013274391 0.9826996210981598 1.0516749297707881 1.3006320648092984 0.9104083527828972 1.1086647457165986 1.1750028641738222 1.0 10.75910246484813 -11.014135911074947 1.220424828530857 0.9988770937425198 1.073455991054736 0.0 0.1392810405117751 1.4572631461750911 3.765404895001705 0.09321721349579018 0.019781816648655918 9.679748841995004e-12 11.014135911074947 0.07457889731221634 SIFS(ph)SEK ddPTM_A549_MK2206_60min_R1 2 SIFSSEK 7 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.015)IFS(0.873)S(0.112)EK;SIFS(0.976)S(0.024)EK 85.73100000000001 0.013471 11799500.0 4237.3 4956.2 4130.1 2976.4 5493.700000000001 4099.200000000001 3819.8 4198.8 5935.1 6366.4 6711.4 True False 4952.4526479612805 5208.449410358205 4715.810283848261 3705.6181336156715 4685.584007460386 4532.974623171263 4513.808215707933 4793.99275828571 4590.809326407156 4928.225818343175 5044.7741547830465 0.98169957584043 1.0324445159591484 0.9347911599525445 0.7345458924265825 0.9287995584535522 0.8985485740473562 0.8947493142836347 0.950288875417829 0.9100128540054706 0.9768972142530167 1.0 12.300573968648287 -10.712627189397502 0.7222298084913883 1.0068415800807928 0.9157100198719966 0.12671765659215717 0.06988689366922768 1.3293847456871335 1.081151914826527 0.073127514283222 0.014227517579131922 1.9380849567210568e-11 10.712627189397502 -0.0911315602087962 SIFS(ph)SEK ddPTM_A549_PD325901_60min_R1 2 SIFSSEK 7 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.001)IFS(0.9)S(0.099)EK;S(0.012)IFS(0.972)S(0.016)EK 83.948 0.014279 15186300.0 7045.200000000001 6887.799999999999 6888.6 7391.6 6855.1 7119.1 6625.5 7768.2 7400.299999999999 7946.200000000001 8499.6 True False 7760.423517597881 7468.259078736205 7356.101820516905 7848.162344458414 6373.621424811159 7061.124409930087 6877.637028112714 7613.257156964992 7089.291126236465 7444.475575893025 7454.203083403657 1.0410802376549153 1.0018856469531723 0.9868394700561394 1.0528506208707789 0.855037266022662 0.9472675121571699 0.9226522206545951 1.0213375020484026 0.9510461476452599 0.9986950305214666 1.0 12.863838409259868 SIGAAS(ph)PRPQSLEK ddPTM_A549_MK2206_60min_R1 2 SIGAASPRPQSLEK 14 1 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 SIGAAS(1)PRPQSLEK;SIGAAS(0.999)PRPQS(0.001)LEK 97.579 1.1697e-05 20685000.0 4582.7 4862.1 4665.4 4289.7 6335.3 4631.8 3784.8 4712.9 6701.2 6840.7 6749.6 True False 5356.147723742041 5109.560122291806 5327.023873094036 5340.676692571951 5403.3857623211625 5121.934001659993 4472.449168755272 5380.968007650927 5183.388899617464 5295.3811189275175 5073.488040516679 1.0557130875184988 1.0071099175728921 1.0499726875381652 1.0526636999873684 1.0650238493064206 1.0095488470173628 0.8815334012889093 1.060605241340617 1.0216617952428626 1.0437358039752551 1.0 12.308762230813613 -7.36687872153773 7.343629366234859 1.0037718003821876 1.044408632063173 0.18715842254552684 0.04488343223546401 0.3737089590621813 23.068195596662758 0.006423387294591942 0.010285475617344388 4.296563932711087e-08 7.36687872153773 0.04063683168098531 SIGAAS(ph)PRPQSLEK ddPTM_A549_PD325901_60min_R1 2 SIGAASPRPQSLEK 14 1 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 S(0.016)IGAAS(0.982)PRPQS(0.003)LEK;SIGAAS(0.999)PRPQS(0.001)LEK 110.12 3.2901e-06 41720000.0 5748.1 6598.200000000001 6757.0 6304.6 7324.2 7745.9 6985.799999999999 6961.2 8184.4 8082.8 8369.2 True False 6331.642880472429 7154.2534703849105 7215.570653141822 6694.020823214533 6809.773459118305 7682.819958544961 7251.648441776436 6822.353405044248 7840.438130017671 7572.450628580725 7339.841456729945 0.8626402787851647 0.974714987041734 0.9830690071003947 0.9120116371283122 0.9277820916519093 1.0467283256507587 0.9879843433303802 0.9294960177632707 1.0682026548173906 1.0316913073970417 1.0 12.84153318532461 -7.440038667211317 0.7057917207141545 1.0279294385847273 0.9292316929128843 0.348933412342882 0.047919673612456394 0.5669619684925105 0.5579011109839198 0.01025953943109477 0.02469139539523933 3.630457297199701e-08 7.440038667211317 -0.09869774567184297 SIGS(ph)AVDQGNESIVAK ddPTM_A549_MK2206_60min_R1 1 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(0.001)IGS(0.999)AVDQGNESIVAK 173.03 4.3668e-28 3623900.0 2034.5 2679.7 2310.3 2199.7 3451.7 2327.5 2525.2 2529.6 3883.5 3864.1 3649.3 True False 2377.8738612506145 2816.085284075883 2637.935279720743 2738.626598748284 2943.9595024393416 2573.7945051305405 2983.9961532817592 2888.1785465750986 3003.8934506751666 2991.1971262659968 2743.0780944437493 0.8668633481733986 1.0266150605700997 0.9616697698341222 0.9983771895869527 1.073232114099299 0.9382869960370062 1.0878276339729454 1.0528969453787183 1.0950812726621648 1.090452777237668 1.0 11.421579980440299 -3.6010223582555185 0.5581642823704451 1.0442395766147734 2.6365297335637647e-16 0.48595019462377353 0.04999401306147242 13.658321366548055 0.6731421537622333 0.008996157830252203 14.015795218127641 0.00025059802373732085 3.6010223582555185 -1.0442395766147732 SIGS(ph)AVDQGNESIVAK ddPTM_A549_PD325901_60min_R1 1 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(0.003)IGS(0.997)AVDQGNESIVAK 198.07 2.9582e-39 4147400.0 2477.0 2838.7 3680.7 3716.4 3939.0 3289.5 3242.4 3348.7 2854.0 3242.2 3749.2 True False 2728.463216528978 3077.927211418516 3930.4944358471344 3945.9535874432127 3662.338228812291 3262.711402630248 3365.791306309359 3281.907551495669 2734.056305052345 3037.4869386826863 3288.072168136966 0.829806365860557 0.9360887030537657 1.195379612994981 1.2000811982417663 1.1138253789871606 0.9922870410958505 1.023636688672934 0.9981251577440924 0.831507389511305 0.9237896199838392 1.0 11.683026248970826 -8.544678139386447 6.600002491641386 0.9199700197604548 1.0478785544194504 0.198741494480694 0.10756868576191933 0.20953845547382344 34.433210896677394 0.020627552971115154 0.023632726718258532 2.8531319729372724e-09 8.544678139386447 0.12790853465899565 SIGSAVDQGNES(ph)IVAK ddPTM_A549_MK2206_60min_R1 2 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 SIGSAVDQGNES(1)IVAK;SIGSAVDQGNES(1)IVAK 289.95 4.303599999999999e-124 27739000.0 6601.1 6403.6 7547.5 6192.799999999999 8266.5 7349.700000000001 6805.7 7066.2 10507.1 9545.0 11246.8 True False 7715.204298599865 6729.515888012952 8617.84899090694 7710.036278005351 7050.508800566336 8127.440375663986 8042.207595592299 8067.855489329923 8127.258626390896 7388.777870709594 8453.909164110912 0.9126197299768674 0.7960241537230531 1.019392191661107 0.9120084127159186 0.8339939149686653 0.961382505760427 0.9513004504157208 0.9543343005837005 0.9613610069165713 0.874007246502827 1.0 13.045402895588781 -6.131694228416551 0.14042721106864745 1.03240265848507 0.7752461176077771 0.0 0.0662882904533317 15.265170313325642 0.4700661201963608 0.18732591987672234 0.7929904291733272 7.38423945672549e-07 6.131694228416551 -0.257156540877293 SIGSAVDQGNES(ph)IVAK ddPTM_A549_PD325901_60min_R1 4 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 SIGSAVDQGNES(1)IVAK;SIGSAVDQGNES(1)IVAK;SIGSAVDQGNES(1)IVAK;SIGSAVDQGNES(1)IVAK 228.39 4.9635e-55 49531200.0 14597.5 15868.4 15708.1 16377.900000000001 17266.9 18051.0 16663.700000000004 19808.5 18361.2 16598.0 17454.3 True False 16079.42745388846 17205.685758154646 16774.146126478765 17389.52568609035 16054.132511571202 17903.998640789974 17297.84622222653 19413.403928032374 17589.542616792965 15549.99944736759 15307.531751923892 1.0504258762597407 1.124001311053442 1.0958099841517914 1.1360110805522117 1.0487734255101888 1.1696202190493417 1.1300219070296875 1.2682256187770078 1.1490776502607785 1.0158397643312564 1.0 13.901954055180557 -10.661653093084512 1.0441458217698736 1.0035613080559378 1.1314660592030903 0.40408051496437514 0.056923011943082795 0.38900652510365724 0.7850610728736434 0.034201656804960005 0.010183873383058206 2.179449984161086e-11 10.661653093084512 0.1279047511471525 SIGVSNFNHR ddPTM_A549_MK2206_60min_R1 1 SIGVSNFNHR 10 0 B4DK69;P52895;S4R3P0 B4DK69 AKR1C2 Aldo-keto reductase family 1 member C2 0 107.21 0.00029288 1881700.0 919.98 1114.7 691.92 599.18 821.59 686.68 876.22 896.87 1119.0 1142.0 1646.8 False True 1075.2501326484835 1171.4334687313458 790.044660323065 745.9791268982125 700.735199353692 759.3440218187067 1035.4178320246092 1024.0040690491817 865.5482866758102 884.0214068465548 1237.8541106321659 0.8686404346141878 0.9463421082255813 0.6382372959278644 0.6026389705304163 0.5660886798653761 0.6134357961059833 0.836461924819094 0.8272413204866509 0.6992328734391641 0.714156376953896 1.0 10.273625577994652 -10.862762040774875 0.6344173768173856 1.0469286397361572 0.7235069961743672 0.0 0.14521306954679947 0.9978121883047261 0.5409230099739709 0.1873236437948611 0.026424724671823118 1.3716331073919148e-11 10.862762040774875 -0.32342164356179004 SIGVSNFNHR ddPTM_A549_PD325901_60min_R1 2 SIGVSNFNHR 10 0 B4DK69;P52895;S4R3P0 B4DK69 AKR1C2 Aldo-keto reductase family 1 member C2 0 ; 137.95 3.8162e-07 7830900.0 1786.02 1946.32 1633.48 1688.6799999999998 1957.42 1770.01 1022.97 1472.0 1458.0 2290.7 1867.4099999999999 False True 1967.3354356015686 2110.343217010635 1744.337775713201 1792.98592832946 1819.9375719324084 1755.5956254049452 1061.8996831406632 1442.6398052383386 1396.7253303315763 2146.064811066691 1637.7304084873188 1.201257194350252 1.2885779039541938 1.0650945764170976 1.094799192246508 1.1112558956595209 1.071968631898636 0.6483971217958159 0.8808774617373231 0.8528420325428618 1.3103895488201216 1.0 10.67748217500561 -7.537274007502908 24.996643146338663 0.9030483233284959 1.145732555095108 0.28113817965235055 0.1586760751664509 142.54549389431384 247522.24715674145 0.017165726115059877 0.02546670880336292 2.9021910101296708e-08 7.537274007502908 0.24268423176661214 SIKPS(ph)DSPR ddPTM_A549_PD325901_60min_R1 2 SIKPSDSPR 9 1 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(0.001)IKPS(0.64)DS(0.36)PR;S(0.006)IKPS(0.621)DS(0.373)PR 63.537 0.0018632999999999998 28417000.0 7912.0 8937.2 9293.0 8917.1 11335.2 9484.9 9121.699999999999 10371.599999999999 9133.6 10574.1 10932.800000000001 True False 8715.22041549344 9690.369209106131 9923.67886334867 9467.889014796547 10539.054656317106 9407.658119108573 9468.831285085766 10164.7303016372 8749.74655494958 9906.44952141281 9588.13490872929 0.9089588849609194 1.010662584678879 1.034995748163065 0.9874588858962271 1.0991767175409761 0.9811770702708401 0.9875571605135732 1.060136345430743 0.9125598083714468 1.03319880411713 1.0 13.22703449306355 -8.763868930442307 24.999483256313265 0.9587088017934254 1.0103799430314118 0.0 0.054385276633581496 85.22900092326724 876982.8192490253 0.0090578798996128 0.009862455550321536 1.7223883112963351e-09 8.763868930442307 0.05167114123798633 SIKPSDS(ph)PR ddPTM_A549_MK2206_60min_R1 4 SIKPSDSPR 9 1 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 SIKPS(0.024)DS(0.976)PR;S(0.001)IKPS(0.088)DS(0.912)PR;SIKPS(0.03)DS(0.97)PR;S(0.004)IKPS(0.297)DS(0.699)PR 83.76899999999999 0.00039225 111129800.0 19497.239999999998 21570.199999999997 18606.2 16140.7 26305.899999999998 19946.02 18380.059999999998 18544.170000000002 26572.5 27357.7 27376.300000000003 True False 22787.897450248187 22668.03104622666 21244.838939332603 20095.172224583566 22436.336957215 22056.694597303485 21719.47898664974 21172.862886638828 20553.871177562996 21177.576569252164 20578.009162557315 1.1073907718785485 1.1015657961447622 1.0324049703500287 0.9765362657699515 1.0903064907774949 1.0718575554644378 1.0554703720401382 1.0289072533393502 0.9988270009599257 1.029136317413338 1.0 14.32881579374262 -2.0000000010829084 0.1552370348011085 0.9832309619878218 1.4133114783035385 0.3011121416833633 0.03518844961310468 42.39140930178383 0.4060425986651609 0.05838558309779521 4.176367278644426 0.009999999975065113 2.0000000010829084 0.43008051631571675 SIKPSDS(ph)PR ddPTM_A549_PD325901_60min_R1 4 SIKPSDSPR 9 1 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(0.001)IKPS(0.134)DS(0.865)PR;SIKPS(0.08)DS(0.919)PR;S(0.001)IKPS(0.088)DS(0.911)PR;S(0.001)IKPS(0.117)DS(0.882)PR 63.537 0.0018632999999999998 142117200.0 40004.6 38068.3 38048.799999999996 37140.1 42284.3 40578.0 39731.299999999996 41452.3 40631.799999999996 39757.3 44375.200000000004 True False 44065.83754216999 41276.449241710485 40631.020374021406 39434.15962571296 39314.3966409159 40247.54622159303 41243.29636330158 40625.50135779976 38924.18674689066 37247.01729297674 38917.33171756952 1.1322933921051976 1.0606186863287939 1.044034073787187 1.0132801475675197 1.0102027787061034 1.0341805166314364 1.0597668067947728 1.0438922599480034 1.0001761433535805 0.9570804484563699 1.0 15.248125177803262 -2.0000000000000004 0.4895878708619828 1.0076071308032652 4.521159897618648 0.6509561810113145 0.025451108648670177 36.95164225415364 0.36036791043620436 0.004416836194360872 133.79092927212423 0.00999999999999999 2.0000000000000004 3.5135527668153825 SIKRPS(ph)PAEK ddPTM_A549_MK2206_60min_R1 3 SIKRPSPAEK 10 2 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 S(0.001)IKRPS(0.999)PAEK;S(0.001)IKRPS(0.999)PAEK;S(0.181)IKRPS(0.819)PAEK 67.234 0.00096193 140349000.0 6383.4 9713.5 9544.800000000001 8033.200000000001 11026.400000000001 8345.4 7539.1 6901.1 12755.0 13311.599999999999 13137.5 True False 7460.761860853858 10207.875660286998 10898.396164081958 10001.334360624049 9404.431166583752 9228.50468877182 8908.85688230893 7879.352058732373 9866.012865549568 10304.500314692283 9875.096173445518 0.7555128304386655 1.0336988603449084 1.1036243063017583 1.0127834893920313 0.9523381850065015 0.9345230189846246 0.902153936106988 0.7979012984116781 0.9990801803105093 1.0434835401807476 1.0 13.269579083297648 SIKRPS(ph)PAEK ddPTM_A549_PD325901_60min_R1 1 SIKRPSPAEK 10 2 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 S(0.098)IKRPS(0.902)PAEK 50.675 0.0054841 6605400.0 1514.8 1614.3 1664.9 1779.0 1833.7 2153.9 1741.9 2102.0 1650.6 1989.1 2157.4 True False 1668.58138086318 1750.3427263863427 1777.890125857011 1888.884789597857 1704.90723792158 2136.3593525232695 1808.1889577042555 2060.073961012899 1581.2310221161185 1863.5078865380706 1892.0534768853888 0.881889122716511 0.9251021431316393 0.939661667905757 0.9983252654714876 0.9010882930899604 1.1291220774795678 0.9556753970193341 1.0888032427096606 0.8357221618910413 0.984912905107572 1.0 10.885737150161303 -3.992156598267343 11.04247136275674 0.9476449296797693 0.5746952925098987 0.0 0.0848595239934523 0.0 0.0 0.011936819209267402 0.0 0.00010182241697298221 3.992156598267343 -0.3729496371698706 SIKS(ph)DVPVYLK ddPTM_A549_PD325901_60min_R1 2 SIKSDVPVYLK 11 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.025)IKS(0.975)DVPVYLK;S(0.346)IKS(0.654)DVPVYLK 102.28 6.5102e-05 41898000.0 4228.6 3804.5 3558.6000000000004 4045.3999999999996 4788.3 4560.0 3920.9 3639.7 4025.5 3636.7 4633.4 True False 4657.884359069211 4125.118566893913 3800.1079956001895 4295.275170230003 4451.986326738232 4522.864871863184 4070.111995098805 3567.1033282105877 3856.3222340533353 3407.078141356896 4063.5211735425746 1.1462680173531548 1.0151586249266762 0.9351761276260948 1.0570328015506278 1.095598161447992 1.113040803456711 1.0016219483730373 0.877835546037229 0.9490100012672991 0.8384546298270197 1.0 11.988514696306039 -7.992683325611083 24.204376406497776 0.9665510510383764 1.0543521867947487 0.4177637439933105 0.07074025001472557 115.12651265849452 380847.5237368614 0.009799015642479918 0.01352250592872559 1.0169899808824408e-08 7.992683325611083 0.08780113575637238 SILAKPS(ph)SSPDPR ddPTM_A549_PD325901_60min_R1 1 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.426)S(0.287)S(0.287)PDPR 79.633 3.5354e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SILAKPSS(ph)SPDPR ddPTM_A549_MK2206_60min_R1 1 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.056)S(0.472)S(0.472)PDPR 79.633 0.00062039 1401300.0 1824.0 1811.2 1953.7 1742.2 2296.6 1931.6 1822.5 1559.8 2650.6 2373.8 3081.4 True False 2131.8466074815033 1903.382343739314 2230.7640375667297 2169.0390782103314 1958.7731822876235 2136.0006299076913 2153.624659177891 1780.9064266871594 2050.2433321384306 1837.556931324301 2316.2033376863947 0.9204056365841173 0.8217682414880557 0.9631123491061849 0.9364631519687462 0.8456827388238718 0.9221990984786751 0.9298081149166721 0.7688903636871831 0.8851741549541045 0.7933487105496518 1.0 11.177546196622544 -10.527246744527028 0.9600994317674441 0.9965596818711804 0.8885481254021224 0.0 0.08111174109805061 0.4428992869172875 0.7634263070351465 0.030309558217416755 0.009753635447191005 2.9699781584088426e-11 10.527246744527028 -0.10801155646905802 SILAKPSS(ph)SPDPR ddPTM_A549_PD325901_60min_R1 1 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.055)S(0.473)S(0.473)PDPR 89.01299999999999 1.7709999999999999e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SILAKPSSS(ph)PDPR ddPTM_A549_MK2206_60min_R1 2 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.019)S(0.098)S(0.882)PDPR;SILAKPS(0.014)S(0.086)S(0.9)PDPR 113.59 6.1462e-06 51583000.0 11786.7 12823.3 11718.8 10961.5 16681.0 12799.2 11862.5 11779.0 18734.300000000003 17623.5 18874.4 True False 13776.00680285211 13475.951197257255 13380.702054274954 13647.067992080438 14227.246997187074 14153.602848578648 14017.762699312874 13448.709321674603 14491.010962529619 13642.339109947681 14187.365573060337 0.9710052745106297 0.9498557803321886 0.9431421207389542 0.9619169902828301 1.0028110521239029 0.9976202259462603 0.9880454991538731 0.9479356299390543 1.0214025209899333 0.9615836738465682 1.0 13.792319102314377 -7.043671400104656 0.5097728071019253 1.0080881063310052 0.947680952646719 0.027265853787810546 0.02477798476982266 0.8083356701318944 0.35790642673218825 0.00530484480245219 0.02153475949930617 9.043334600486698e-08 7.043671400104656 -0.060407153684286174 SILAKPSSS(ph)PDPR ddPTM_A549_PD325901_60min_R1 2 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.023)S(0.108)S(0.869)PDPR;SILAKPS(0.022)S(0.135)S(0.843)PDPR 103.39 3.4407e-05 102475000.0 13329.4 11652.2 12376.4 12709.2 15402.300000000001 13959.8 13109.3 13452.7 14292.4 14451.7 15829.7 True False 14682.59087541435 12634.171787399462 13216.336929339113 13494.218419312589 14320.495583050415 13846.116017156943 13608.181585184211 13184.375345061015 13691.740131159828 13539.217195657444 13882.747252735991 1.0576142177133367 0.9100627964619566 0.9519972299959907 0.9720135484461239 1.0315318230855317 0.9973613842482201 0.9802225263808884 0.9496949778771386 0.9862414032252499 0.9752548936586852 1.0 13.761005470211275 -9.744594838947384 1.2747462915154195 0.9972474040379647 0.9797932561244838 0.0 0.03835543258284199 1.1485068426845866 3.784677253820183 0.010068124123364174 0.006909174053368851 1.80054989687965e-10 9.744594838947384 -0.01745414791348099 SILFVPTSAPR ddPTM_A549_MK2206_60min_R1 1 SILFVPTSAPR 11 0 P14625 P14625 HSP90B1 Endoplasmin 0 114.5 6.2823e-05 2519800.0 1286.8 1776.0 1652.4 1263.6 1981.8 1734.7 1418.7 1343.7 2536.0 2157.3 2222.3 False True 1503.9803807605253 1866.3908140906683 1886.7351669525842 1573.1820567251602 1690.2798452745863 1918.2648025993337 1676.459426049752 1534.173589908666 1961.600049159836 1669.9644316900803 1670.4415776401884 0.900348986095748 1.117303854904818 1.1294828817766565 0.9417761613354803 1.011876061934727 1.148357912228958 1.0036025494636365 0.9184239727054528 1.1743003020380776 0.9997143593906576 1.0 10.706013811110683 -8.773944866775157 24.999740543331626 1.082308455449861 1.0288638711091782 0.007655082947287228 0.09120789067294605 535.6979064390412 1070911.382256118 0.01692926742222407 0.01808118114708448 1.6828876883212568e-09 8.773944866775157 -0.05344458434068278 SILFVPTSAPR ddPTM_A549_PD325901_60min_R1 2 SILFVPTSAPR 11 0 P14625 P14625 HSP90B1 Endoplasmin 0 ; 129.85 2.7438e-07 10817000.0 4523.4 4338.5 4402.5 5159.5 6260.700000000001 4834.5 5328.1 5760.299999999999 5523.0 6090.2 5802.8 False True 4982.61223804892 4704.120620967077 4701.280124383135 5478.190596925323 5820.970030242481 4795.129434873365 5530.8637611481945 5645.4062976320665 5290.88751674986 5705.663732639967 5089.092386979939 0.9790767899589639 0.9243535513330858 0.9237953974683203 1.076457289504286 1.1438129999634112 0.9422366642706947 1.086807497403367 1.1093149560568825 1.0396524791505453 1.121155463248708 1.0 12.313192666786387 -6.253065019641902 24.837646143293398 1.0369965173094897 0.9406030708682477 0.3976455811744246 0.06040976231148799 480.50747482881707 1425140.353109771 0.007889607928743998 0.020494534830966755 5.583865906028519e-07 6.253065019641902 -0.09639344644124204 SILKPSTPIPPQEGEEVGESS(ph)EEQDNAPK ddPTM_A549_PD325901_60min_R1 1 SILKPSTPIPPQEGEEVGESSEEQDNAPK 29 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;A0A3B3ISZ5;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 SILKPST(0.001)PIPPQEGEEVGES(0.463)S(0.536)EEQDNAPK 53.728 0.0017577000000000003 2838500.0 383.32 538.71 653.34 336.05 519.82 394.88 331.28 524.93 643.69 615.39 777.68 True False 422.2343642147304 584.1089823029095 697.6795812525792 356.80704527507595 483.3096364816467 391.6642282020465 343.8870416833719 514.4598593503811 616.6379477922721 576.5341703768856 682.0302901196943 0.6190844751787044 0.8564267463845338 1.0229451556031894 0.5231542505428276 0.7086336831122666 0.5742622195464524 0.504210805099317 0.7543064682069983 0.9041210584416332 0.8453204772997773 1.0 9.413692002975894 -8.795804235677563 2.748799210025637 0.9601708439910734 0.6929977214495455 0.31151379406882707 0.14639953507374784 0.2004727767414266 2.9687977483288077 0.02713544414469906 0.02913143022202252 1.6002792143368804e-09 8.795804235677563 -0.2671731225415279 SILPYPVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SILPYPVSPK 10 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 SILPYPVS(1)PK;SILPYPVS(1)PK 107.09 0.00027557 54741000.0 18293.2 18792.5 18133.4 17126.6 24375.0 18415.7 17238.4 17561.9 24147.0 24931.0 25412.0 True False 21380.644934199914 19748.957980742616 20704.988789892268 21322.617768842283 20789.469789367246 20364.43715064768 20370.394142536166 20051.353106063103 18677.74305483539 19299.069784668503 19101.499064479365 1.1193176442344668 1.033895712272512 1.0839457531579135 1.1162798111742576 1.0883684950165395 1.066117223674703 1.066429083590429 1.0497266752927292 0.9778155626313131 1.0103432049768564 1.0 14.221398243361534 -8.548819529536438 2.5183690444524345 0.98939947179054 1.0814649826432627 0.7072546477998425 0.023944059147862493 0.09743490902737843 1.2390236991415469 0.004083242865907469 0.004750877441023586 2.8260540937668035e-09 8.548819529536438 0.09206551085272274 SILPYPVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SILPYPVSPK 10 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 SILPYPVS(1)PK;SILPYPVS(1)PK 112.64 0.0001286 82986000.0 15552.3 15575.9 16087.199999999999 17041.2 19455.7 17518.2 16760.6 17630.0 19650.3 19545.6 19268.6 True False 17131.158047001867 16888.5357566258 17178.974132192252 18093.796220626755 18089.19875052127 17375.537587340692 17398.43380475224 17278.35581953255 18824.466226758985 18311.487480327043 16898.68435371919 1.0137569107994797 0.999399444543672 1.0165864852319924 1.0707221841589423 1.0704501233280959 1.028218364438327 1.0295732756806635 1.0224675162791474 1.1139604618164227 1.0836043266467021 1.0 14.044623309474051 -6.107285442419037 5.50955976529531 1.0511310837079897 1.0068868205161852 0.2786521521469211 0.030596834481234958 0.30634351352467565 13.09481863401967 0.005830310793364307 0.015898374517874687 7.811142442355321e-07 6.107285442419037 -0.04424426319180452 SILPYPVSPK ddPTM_A549_MK2206_60min_R1 1 SILPYPVSPK 10 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 0 80.23899999999999 0.0033329 1059200.0 1493.2 1800.3 2018.9 1923.3 2804.2 2115.8 1750.7 2128.6 3078.7 2477.0 2779.7 False True 1745.2156547650115 1891.927580296978 2305.210377971782 2394.5085863402187 2391.7058947012774 2339.692551645628 2068.779528572145 2430.335568564103 2381.3793656736543 1917.4439796487877 2089.423774182799 0.8352617005363538 0.9054781531989294 1.1032756525771703 1.1460138512479319 1.1446724806396464 1.1197788503008264 0.990119646447151 1.16316067549037 1.139730195041474 0.917690323686838 1.0 11.028889412255456 -5.666322410056239 4.074445345564412 1.0847344209756893 0.8511665298158756 0.5397920413649582 0.07562004911658628 0.1073112822988988 3.202090686007614 0.009551164482331183 0.041545047609906086 2.1561431446617375e-06 5.666322410056239 -0.2335678911598137 SILS(ph)PGGSCGPIK ddPTM_A549_MK2206_60min_R1 2 SILSPGGSCGPIK 13 0 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;P78347-5 P78347-2 GTF2I General transcription factor II-I 1 SILS(1)PGGSCGPIK;SILS(1)PGGSCGPIK 193.46 3.1300000000000003e-26 26493000.0 12758.8 14160.099999999999 10678.7 9584.0 14514.900000000001 11982.8 12030.900000000001 10926.2 17371.0 15585.0 16425.4 True False 14912.173517288926 14880.788607322795 12193.10023440848 11932.08043024211 12379.77743777176 13250.811942461112 14216.75879950797 12475.022310084145 13436.496235786877 12064.337675747409 12346.519862021849 1.2078037928047305 1.2052617882304153 0.9875738564933354 0.9664326922556886 1.0026936801723547 1.0732426700434738 1.1514790368773484 1.010407989417129 1.0882820734867822 0.9771447995525898 1.0 13.5918168233558 -5.749927123730986 24.88223528927413 1.039480387107257 1.2065329232696143 0.6152054045225415 0.05371776447961296 109.50575033653611 236677.44290081708 0.007636379958813456 0.029064887211784966 1.778577837138256e-06 5.749927123730986 0.16705253616235716 SILS(ph)PGGSCGPIK ddPTM_A549_PD325901_60min_R1 2 SILSPGGSCGPIK 13 0 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;P78347-5 P78347-2 GTF2I General transcription factor II-I 1 S(0.001)ILS(0.999)PGGSCGPIK;S(0.008)ILS(0.992)PGGSCGPIK 167.98 1.4302e-21 41957000.0 14875.800000000001 15188.7 17678.1 13819.4 15554.2 15999.199999999999 16109.0 18196.1 11283.5 14963.0 17026.4 True False 16385.980265014838 16468.705053747293 18877.84217305112 14672.992951865448 14461.726651076973 15868.907819717848 16722.036810183028 17833.164510935687 10809.29373442822 14018.233626398447 14932.26073924232 1.0973542821919866 1.102894286493884 1.264232021038832 0.9826370707085559 0.9684887575711311 1.0627264080658596 1.119859685160542 1.194270902601488 0.7238886276624644 0.9387884307135229 1.0 13.866144985101062 -8.754054483055604 24.999926764805288 0.8696140716765006 1.0959409495474264 0.46336598369000137 0.10082377100676547 121.97404139493057 412915.7093990204 0.021242180271849098 0.02385233249571866 1.761755017083356e-09 8.754054483055604 0.22632687787092576 SILVS(ph)PTGPSR ddPTM_A549_MK2206_60min_R1 2 SILVSPTGPSR 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 S(0.003)ILVS(0.988)PT(0.009)GPSR;S(0.051)ILVS(0.945)PT(0.004)GPSR 169.33 5.06e-15 90359000.0 16071.4 16911.1 16857.199999999997 16729.6 21541.9 17166.6 16412.5 16757.4 23942.0 23651.0 24588.0 True False 18783.859411994657 17771.80275685175 19247.80443981669 20828.352751020284 18373.115046382372 18983.15821773317 19394.43880315891 19132.81276738518 18519.175227517655 18308.222673667122 18482.12100572242 1.0163259620569962 0.9615672763612606 1.0414283314051023 1.126946022297518 0.9941020860481166 1.0271092918315825 1.0493621807342361 1.0352065524006306 1.0020048684771494 0.990590996996424 1.0 14.173842709293147 -8.767023827896962 22.1407290871932 1.0009467297427552 1.0318886135264618 0.13293108057526792 0.03836482659080617 52.98340779899079 210063.5920033754 0.00667302032899521 0.0072113963452168405 1.709921496373571e-09 8.767023827896962 0.030941883783706547 SILVS(ph)PTGPSR ddPTM_A549_PD325901_60min_R1 2 SILVSPTGPSR 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 SILVS(0.99)PT(0.009)GPSR;SILVS(0.95)PT(0.05)GPSR 195.29 8.298900000000001e-24 156080000.0 11248.6 11377.5 10173.3 12242.599999999999 13135.8 13687.8 12542.9 12403.3 13293.3 13181.5 12767.1 True False 12390.54959121835 12336.321854339727 10863.721315022593 12998.797597038061 12213.18672404989 13576.33109497563 13020.226923238244 12155.906451299383 12734.628829695992 12349.217840431136 11196.827637315018 1.106612514952457 1.1017693809295752 0.9702499374749414 1.1609357594929588 1.0907720579128781 1.212515860271938 1.1628496342880628 1.0856562988241507 1.1373425797192798 1.102921134489524 1.0 13.450802415384935 -10.783203773054337 0.9453682799229703 0.997479859891897 1.1150528864355393 0.04260689692774122 0.06517697296607336 0.5501553252255738 0.8419633778155763 0.04525151131404296 0.010448393242641366 1.6473892472204157e-11 10.783203773054337 0.11757302654364232 SIMVQS(ph)PEK ddPTM_A549_MK2206_60min_R1 4 SIMVQSPEK 9 0 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase 1 SIMVQS(1)PEK;SIMVQS(1)PEK;SIMVQS(1)PEK;SIMVQS(1)PEK 141.08 4.0126e-05 28806900.0 12151.9 14382.900000000001 12522.9 12017.5 18336.0 14024.900000000001 13089.7 13959.0 20841.199999999997 18502.2 19140.4 True False 14202.843634569337 15114.928175667053 14298.835525436045 14961.788039486068 15638.798689552334 15509.005609024847 15467.929054178789 15937.730997644618 16120.701476557557 14322.540169664031 14387.3104318338 0.987178507189481 1.050573576436031 0.9938504902068428 1.0399294649527517 1.0869855602023748 1.0779642020310587 1.0751091475689563 1.1077630578110216 1.1204805479756943 0.9954980979609326 1.0 13.812509298985667 -6.527530034608551 6.201890795845508 1.0667348711245366 1.0147342781132653 0.27579693011664996 0.03953133860276634 0.1923408836841076 31.434543138942004 0.006811145389767751 0.014852110746074641 2.9680414748031037e-07 6.527530034608551 -0.052000593011271246 SIMVQS(ph)PEK ddPTM_A549_PD325901_60min_R1 3 SIMVQSPEK 9 0 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase 1 SIMVQS(1)PEK;S(0.005)IMVQS(0.995)PEK;S(0.003)IMVQS(0.997)PEK 138.63 4.2716e-05 80465000.0 33669.4 35407.399999999994 35007.0 34632.6 40014.9 37202.6 34346.1 35743.0 37594.3 38854.1 39473.0 True False 37087.49270189774 38391.305860281085 37382.785534192066 36771.777045658666 37204.3914679109 36899.63436008273 35653.15963040706 35030.07782515892 36014.34230869986 36400.84549511779 34618.071239963334 1.0713333057990733 1.1089960961187781 1.0798633255753753 1.0622133391189361 1.0747101191750366 1.0659067082132971 1.0299002328370281 1.0119014887438318 1.0403335893284735 1.0514983703972627 1.0 15.07923772614725 -6.883240219855759 0.1949885028110097 0.992025332731538 1.1379985628317488 0.5422153309186639 0.020495376713062338 2.275672571459794 0.1533412800002413 0.024925253793237404 0.08917935194527657 1.308457979811026e-07 6.883240219855759 0.1459732301002108 SINHQIES(ph)PSER ddPTM_A549_MK2206_60min_R1 1 SINHQIESPSER 12 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SINHQIES(0.898)PS(0.102)ER 111.74 6.1355e-05 7200000.0 2191.6 2918.7 2429.8 2538.0 4249.7 2710.6 2683.8 2572.3 3837.1 3901.3 4591.1 True False 2561.488500524376 3067.249363224344 2774.382176628776 3159.8101139351493 3624.574759543549 2997.4338928493407 3171.41172033011 2936.9314023383663 2968.0029765895933 3019.9936204294754 3451.003162086068 0.742244611267178 0.8887993488160839 0.8039349853715326 0.9156207530175376 1.0502959833141852 0.8685688630425499 0.9189825599617966 0.8510370070374103 0.8600406424419182 0.8751060136971722 1.0 11.752800080349106 -14.999999999973715 0.27939664869380637 1.9218434100457298 0.8712024534225071 0.0 0.08221524624843451 45.27881670611358 0.59579542170569 23.352231238160286 0.030538951627597156 1.0000000000605229e-15 14.999999999973715 -1.0506409566232227 SINHQIES(ph)PSER ddPTM_A549_PD325901_60min_R1 1 SINHQIESPSER 12 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SINHQIES(0.996)PS(0.004)ER 157.33 2.0776e-28 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SIPAGAEPGEKGS(ph)AR ddPTM_A549_MK2206_60min_R1 2 SIPAGAEPGEKGSAR 15 1 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 SIPAGAEPGEKGS(1)AR;SIPAGAEPGEKGS(1)AR 84.035 5.4136000000000005e-05 57367000.0 5776.9 6640.4 7084.700000000001 6010.299999999999 7483.0 6153.7 6667.9 6744.9 9084.2 9297.8 10220.6 True False 6751.899488355209 6978.3679965583815 8089.416991835496 7482.823769812621 6382.260612670162 6804.880449504536 7879.371119304394 7701.010230389933 7026.643204486508 7197.420522397457 7682.542945790091 0.8788625766231661 0.908340902979581 1.0529608553985847 0.9740035067312038 0.8307484458863373 0.8857588558269629 1.025620185256779 1.0024037984206728 0.9146246567143493 0.9368539262564782 1.0 12.90736821123857 -7.744368652548464 24.999391823621508 0.9670390909219042 0.9253672470093804 0.15481368190112477 0.0610863732198842 514.5981554152634 753606.8753513169 0.010285349481102683 0.015234934102318222 1.8014878916869782e-08 7.744368652548464 -0.041671843912523765 SIPAGAEPGEKGS(ph)AR ddPTM_A549_PD325901_60min_R1 2 SIPAGAEPGEKGSAR 15 1 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 SIPAGAEPGEKGS(1)AR;SIPAGAEPGEKGS(1)AR 140.16 2.9691e-11 82600000.0 10030.5 9942.3 10864.4 11338.4 12197.8 11766.6 11223.2 10850.3 11095.8 11093.599999999999 12034.3 True False 11048.788975936179 10780.17251350489 11601.723516944507 12038.747216625268 11341.068608125554 11670.776710803802 11650.305017570689 10633.88225460432 10629.48211268389 10393.148202754379 10554.157391713086 1.046866042059546 1.021414795459585 1.0992562538487392 1.1406639838513164 1.0745593596159873 1.105799002009148 1.1038593215142192 1.0075538823169181 1.00713697154355 0.984744477177768 1.0 13.365523782931684 -8.27194276545795 23.188821127317127 1.003778171143832 1.0853442175846144 0.6434345250209804 0.03030298052408088 133.92144687075526 295664.3486961339 0.0051463237379206885 0.006260071243346113 5.346348128881474e-09 8.27194276545795 0.08156604644078236 SIPAGAEPGEKGS(ph)ARK ddPTM_A549_MK2206_60min_R1 1 SIPAGAEPGEKGSARK 16 2 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 SIPAGAEPGEKGS(1)ARK 64.83 0.0006109 7825300.0 1902.8 2296.3 2080.3 1688.8 2840.5 2057.4 1905.9 2281.2 3385.7 3351.4 3221.4 True False 2223.9461210064715 2413.1718617096863 2375.317821236664 2102.556075813112 2422.666212787596 2275.1127024084094 2252.177359630803 2604.567085882004 2618.8443558519157 2594.3164123516126 2421.437473882961 0.9184404491106694 0.9965864853986833 0.9809536058049267 0.8683090513344958 1.000507441929799 0.9395711130050743 0.9300993248523834 1.0756284702678613 1.08152466627701 1.071395169329492 1.0 11.241648034955077 -8.25623728273244 24.986120086668215 1.042358235370479 0.9495896181792773 0.6070962108568655 0.0416918975520613 280.1644775116794 1345655.751649932 0.007319930842258164 0.009314839417188359 5.543227683774406e-09 8.25623728273244 -0.09276861719120166 SIPAGAEPGEKGS(ph)ARK ddPTM_A549_PD325901_60min_R1 2 SIPAGAEPGEKGSARK 16 2 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 SIPAGAEPGEKGS(1)ARK;SIPAGAEPGEKGS(1)ARK 96.37899999999999 1.0142e-06 22564000.0 4257.700000000001 5021.0 4706.3 5093.9 5567.6 6170.6 5754.1 7286.8 5758.9 5576.0 6954.5 True False 4689.938569646923 5444.137291201033 5025.697819280948 5408.5386339137285 5176.550983177282 6120.348679455914 5973.075424264335 7141.45905761599 5516.873460114209 5223.930408393886 6099.140588207761 0.7689507237650126 0.8926072800694038 0.824000979580265 0.8867706123008117 0.8487344910831802 1.0034772261667746 0.9793306676374761 1.1708959572801905 0.9045329223564181 0.8565027044128104 1.0 12.574390255783548 -7.253587628851077 23.657772226222402 0.9769360582683435 0.848142825346051 0.4398027441400131 0.07916193216571893 225.29306747651168 678818.6956757581 0.01112240306597187 0.019021536578982565 5.577150590103687e-08 7.253587628851077 -0.1287932329222925 SIPLECPLS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 SIPLECPLSSPK 12 0 Q92667;Q92667-2;I3L2A2;I3L2N7 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SIPLECPLS(0.601)S(0.399)PK 176.51 4.9084e-16 10202000.0 3007.3 3280.1 2894.3 2286.0 3968.6 3271.4 2815.0 3105.6 4463.9 4237.6 4331.3 True False 3514.8587185740816 3447.043079560136 3304.755261262929 2846.0701026224383 3384.8241971726316 3617.57737662043 3326.4490620497986 3545.828310501119 3452.833777383514 3280.323216858985 3255.718672201301 1.0795953435981516 1.0587656448919998 1.015061678848459 0.8741756856706893 1.0396550003148883 1.111145569028685 1.0217249698054145 1.089107710926284 1.0605442684176813 1.0075573313099093 1.0 11.668760325864762 -5.580090199213419 4.706567648245462 1.028044249879437 1.075309457389936 0.08316779767996618 0.05795654664060479 0.39881197248013023 17.74872340252441 0.008218668275146845 0.03611534515779872 2.629721764673185e-06 5.580090199213419 0.0472652075104989 SIPLECPLSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SIPLECPLSSPK 12 0 Q92667;Q92667-2;I3L2A2;I3L2N7 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SIPLECPLS(0.199)S(0.801)PK 172.09 9.853400000000002e-16 9848700.0 4537.0 5253.3 4283.2 3247.2 4578.0 4463.6 3988.4 3173.6 5404.8 4772.9 5093.2 True False 5302.734680999769 5520.670531341505 4890.622165995709 4042.764145772346 3904.5822644399295 4935.9351893021185 4713.0406533141795 3623.4675187423813 4180.621429692068 3694.6985750769863 3828.4178748310337 1.3850981931364543 1.4420240192785012 1.277452547212223 1.0559882118277835 1.0198944817674214 1.2892885130832183 1.231067455906231 0.9464660434703206 1.091997155581293 0.965071916356584 1.0 11.902532594382473 -2.0000000000055436 0.26834440246190683 1.0237148412428956 4.087962316704468 0.6024103176537632 0.10581046402329024 23.010738777038686 0.2841584756727 0.043466695998564946 33.136541379900194 0.009999999999872354 2.0000000000055436 3.0642474754615723 SIPLECPLSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SIPLECPLSSPK 12 0 Q92667;Q92667-2;I3L2A2;I3L2N7 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SIPLECPLS(0.134)S(0.866)PK;SIPLECPLS(0.081)S(0.919)PK 204.48 5.596300000000001e-25 16418000.0 9489.7 10858.5 11697.8 10432.1 8420.0 8984.6 9796.8 10969.3 8252.9 11681.400000000001 13790.0 True False 10453.087358052097 11773.583902909071 12491.683052585826 11076.467123981907 7828.60824742308 8911.432396434633 10169.622585014662 10750.508706250617 7906.059313232835 10943.834410439806 12093.917422012375 0.8643260073056418 0.9735128405523706 1.0328897260245444 0.9158709074548015 0.6473178188875407 0.7368524263457232 0.8408873841411165 0.8889186465490004 0.6537219527266543 0.9049040131959822 1.0 13.561994012877618 -6.536394723582563 24.929402364449235 0.8173846461321707 0.9612049672294991 0.28038159853224387 0.10597892655878739 288.0655213912557 531318.4159596331 0.019858239301536844 0.04135502514491102 2.9080728138609237e-07 6.536394723582563 0.14382032109732845 SIPS(ph)DPEER ddPTM_A549_MK2206_60min_R1 1 SIPSDPEER 9 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.001)IPS(0.999)DPEER 75.294 0.0020842 2055000.0 398.99 674.4 706.86 484.73 611.34 523.71 622.55 518.54 687.79 668.95 900.75 True False 466.3297576310555 708.7240794046996 807.1033769741608 603.4888717603566 521.412695837201 579.1286445894375 735.6592765822746 592.0446329621491 532.0066631749384 517.833730394048 677.0689155646855 0.6887478466532901 1.0467532375395099 1.1920549864573602 0.8913256211991919 0.7701028416026676 0.8553466733979888 1.0865352989491828 0.8744230008969989 0.7857496496220578 0.7648168723890787 1.0 9.403158875987536 SIPS(ph)DPEER ddPTM_A549_PD325901_60min_R1 2 SIPSDPEER 9 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.001)IPS(0.999)DPEER;S(0.001)IPS(0.999)DPEER 85.73100000000001 0.0012499 4440800.0 1458.27 1269.44 1065.91 1524.47 1504.7 1449.67 1330.7800000000002 1298.3 1178.6 1429.08 1368.0900000000001 True False 1606.3124968783648 1376.4201639000673 1138.249062437531 1618.633049577428 1399.0150629331947 1437.8643681565566 1381.4235611307574 1272.404388003353 1129.0675406919047 1338.847644911682 1199.82360303705 1.3387905462206202 1.1471854366058543 0.948680338973447 1.3490591829334477 1.1660172873678614 1.1983964680449415 1.151355547293813 1.0604928797721458 0.9410279459696874 1.1158704008845366 1.0 10.228606602387561 -8.393100687796661 2.3943250731627086 0.972315841083447 1.1833944849806373 0.3014528756283962 0.10949986245150717 0.18697118709063948 2.096707700219948 0.016827797537354167 0.020612770331772067 4.044821047970012e-09 8.393100687796661 0.21107864389719022 SIPTDNQIK ddPTM_A549_MK2206_60min_R1 2 SIPTDNQIK 9 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 156.92 3.4675e-05 35667000.0 6274.8 7242.1 7057.6 6664.299999999999 8438.6 6187.9 6352.1 6232.3 9713.6 8643.3 10028.7 False True 7333.83283586894 7610.6919564898835 8058.473804335857 8297.053799171797 7197.293118545821 6842.699470804411 7506.194347085803 7115.747610618271 7513.485109431776 6690.772526967448 7538.297011960656 0.9728766091642047 1.009603620607461 1.0690045499069434 1.100653607307759 0.9547638023715728 0.90772484288526 0.9957413902869684 0.9439463050246035 0.9967085533391014 0.887570828842578 1.0 12.880022923554131 -6.785999393363385 24.996153416936256 0.9845133776246915 1.0382160187982945 0.2882506690645279 0.050698751512491015 242.6601095321157 246968.67470546655 0.006398668822501976 0.01209595395756102 1.6368188077877994e-07 6.785999393363385 0.053702641173603016 SIPTDNQIK ddPTM_A549_PD325901_60min_R1 2 SIPTDNQIK 9 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 173.48 3.5623000000000006e-07 51509000.0 23189.0 20588.0 21938.0 23425.0 27218.0 23500.0 24288.0 24681.0 25869.0 25086.0 26829.0 False True 25543.13020916047 22323.023013592272 23426.844603910788 24871.90904796504 25306.301577002527 23308.623791400172 25212.29313090357 24188.71809313005 24781.81589187076 23502.065678796447 23529.203083043507 1.085592661978778 0.9487368923973257 0.9956497260544075 1.0570655096214951 1.0755273558431606 0.9906252969611922 1.0715319614489194 1.0280296365227017 1.053236516528261 0.9988466500904735 1.0 14.522164837909756 -6.236926452896137 24.476064399918677 1.0320055522305698 1.0038674716364313 0.05894824553548694 0.040646101281861594 1182.6920905121128 1180911.5326735545 0.005388397944984595 0.014241858759947537 5.795268300963494e-07 6.236926452896137 -0.02813808059413847 SIQDLTVTGTEPGQVS(ph)SR ddPTM_A549_PD325901_60min_R1 2 SIQDLTVTGTEPGQVSSR 18 0 Q9UG54;O43318-4;O43318-3;O43318-2;O43318 Q9UG54 DKFZp586F0420;MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 SIQDLTVTGTEPGQVS(0.661)S(0.339)R;SIQDLTVT(0.009)GT(0.018)EPGQVS(0.602)S(0.371)R 181.88 1.3439999999999998e-39 15439200.0 7210.2 7849.4 8251.4 8196.2 8584.9 7675.5 8305.7 7728.0 8118.2 8456.8 9294.4 True False 7942.174196131301 8510.896485471692 8811.389623699044 8702.460659079234 7981.926240297194 7612.99327280391 8621.777958553432 7573.858977501284 7777.02028580097 7922.836204753478 8151.247722055964 0.9743507334025755 1.0441219277930391 1.0809866077136685 1.0676231364594375 0.9792275382208526 0.9339666186569666 1.057724933966157 0.929165599642818 0.9540895518066032 0.971978336925715 1.0 12.992805196109488 -6.77557655489637 24.030995816324072 0.9768215872619038 1.0447396883908933 0.3775370224411092 0.04104177716502634 114.97906391833318 195446.57910103715 0.005893353377303054 0.011180365853125006 1.676576772531699e-07 6.77557655489637 0.06791810112898944 SIQEELQQLR ddPTM_A549_PD325901_60min_R1 2 SIQEELQQLR 10 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 104.79 0.00093133 2802900.0 1676.07 1679.23 1202.52 1336.13 1915.31 1442.6599999999999 1593.42 1946.5700000000002 1896.4 1677.49 1849.6399999999999 False True 1846.2233925424803 1820.7446053581978 1284.1302385401964 1418.6597155286036 1780.785233060796 1430.9114552723988 1654.0584700528802 1907.7441342953755 1816.7009029086444 1571.5729951177652 1622.1460058340067 1.1381363859372615 1.1224295462985059 0.7916243259989266 0.8745573520672184 1.0977958991707573 0.8821101492258787 1.0196729912745839 1.176061912697268 1.1199367358887091 0.9688233916464012 1.0 10.663687963904492 -8.00347010053885 24.78747433790049 1.0686376651636664 0.9795063014707437 0.09918553735738034 0.11450625135238361 226.7630413326859 1619820.2438912443 0.01827236675545675 0.024972551257478565 9.920416350396183e-09 8.00347010053885 -0.08913136369292274 SIQEIQELDKDDES(ph)LR ddPTM_A549_PD325901_60min_R1 2 SIQEIQELDKDDESLR 16 1 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 1 SIQEIQELDKDDES(1)LR;SIQEIQELDKDDES(1)LR 102.48 3.1577e-07 11427000.0 4790.3 4282.8 4397.6 4832.299999999999 5465.6 4780.0 5082.9 5112.0 4834.200000000001 5198.4 4925.5 True False 5276.607729567525 4643.7265864879055 4696.0475809170475 5130.780196050436 5081.715111296388 4741.07326480395 5276.332540969601 5010.037149713583 4631.035385383339 4870.172136835506 4319.694725317037 1.221523293912918 1.075012676074485 1.0871248732912226 1.1877645348361672 1.1764060736776771 1.0975482218725505 1.221459588346802 1.1598127803686125 1.0720746904269842 1.1274343319429978 1.0 12.076713644774644 -9.16769620728688 1.3609625255372313 1.021044982871204 1.1505506883907242 0.22234322469936119 0.05903418491770898 0.20063918508209194 0.767718861616147 0.011177324188275448 0.010117941210215482 6.796789075908135e-10 9.16769620728688 0.12950570551952012 SIQEIQELDKDDES(ph)LRK ddPTM_A549_MK2206_60min_R1 4 SIQEIQELDKDDESLRK 17 2 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 1 SIQEIQELDKDDES(1)LRK;SIQEIQELDKDDES(1)LRK;SIQEIQELDKDDES(1)LRK;SIQEIQELDKDDES(1)LRK 176.54 7.0966e-31 53079600.0 4748.73 4860.46 5612.3 4955.43 6388.6 5973.4 5874.599999999999 6168.0 7609.400000000001 8034.299999999999 7992.0 True False 5550.1995286982665 5107.836653296811 6408.2085315226295 6169.510572457708 5448.845402927244 6605.501223177987 6941.938777945914 7042.332888707787 5885.883049714847 6219.346049936314 6007.36583202105 0.9238990405934743 0.8502622940108824 1.066725202145168 1.0269909882252182 0.9070273985784709 1.0995669995605557 1.1555711724668591 1.1722830081647524 0.9797776952988841 1.0352867169809015 1.0 12.552516807353163 -5.759226391749012 24.99880851172715 1.0213655412352554 0.8870806434452823 0.3492163938098616 0.07813513947567702 55.203499031103846 623556.2506226815 0.01170010003649014 0.041305775877108465 1.74089913000734e-06 5.759226391749012 -0.1342848977899731 SIQEIQELDKDDES(ph)LRK ddPTM_A549_PD325901_60min_R1 2 SIQEIQELDKDDESLRK 17 2 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 1 SIQEIQELDKDDES(1)LRK;SIQEIQELDKDDES(1)LRK 247.52 7.785299999999999e-76 95457000.0 7092.5 7012.299999999999 7171.599999999999 6940.900000000001 8334.3 6653.1 7762.0 7192.7 6325.200000000001 6641.7 6849.5 True False 7812.525378777457 7603.251130668989 7658.307902334153 7369.623629072386 7748.9275197741235 6598.919359428274 8057.3871575293815 7049.235955936008 6059.373840475508 6222.3419285203845 6007.054922557921 1.3005583400677037 1.265720262040051 1.2748856138430473 1.226828075334836 1.2899711455400644 1.0985282213165326 1.341320707302338 1.1734928424683533 1.0087095787523295 1.0358390273999343 1.0 12.552442139160682 -8.658109347418263 3.4710441610252496 1.0033379437184262 1.2524185514357453 0.7611309292971192 0.05899653420185838 0.06863015581074991 1.6164785917072635 0.009268761788037129 0.01044021328336018 2.1973065614719854e-09 8.658109347418263 0.2490806077173191 SIQEIQELDKDDESLR ddPTM_A549_MK2206_60min_R1 1 SIQEIQELDKDDESLR 16 1 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 94.01 7.24e-06 4898700.0 2062.8 2159.1 2229.6 1884.2 2644.9 3100.2 2413.0 2387.7 3748.2 3135.8 3003.3 False True 2410.950209382042 2268.9889677382685 2545.790806243936 2345.8290845849515 2255.838713677843 3428.2611062537912 2851.410865622083 2726.1637870245754 2899.2386846454624 2427.4206020923166 2257.4977231367407 1.067974591811363 1.005090257449102 1.1277047060347059 1.0391279958083308 0.9992651113478898 1.5186111025132296 1.2630847138397614 1.207604224396131 1.2842709230364306 1.0752704541909668 1.0 11.140508817298015 SIQEIQELDKDDESLR ddPTM_A549_PD325901_60min_R1 2 SIQEIQELDKDDESLR 16 1 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ; 151.57 6.4023e-15 15019800.0 4641.9 4896.9 6412.099999999999 5694.6 6319.0 7490.6 5126.9 6621.6 7433.4 5550.5 5991.900000000001 False True 5113.142270813829 5309.578948672042 6847.263665089638 6046.342508625046 5875.175239366559 7429.599037100518 5322.006985047326 6489.526993455286 7121.000048344818 5200.040482745746 5254.934285783605 0.97301735716213 1.010398733821709 1.3030160402983209 1.1506028771820174 1.118030201683191 1.4138329107559204 1.012763756046422 1.2349397043863473 1.3551073450356095 0.9895538554713489 1.0 12.359457007714072 -5.636867294766429 7.351956836430412 1.1835567334377897 0.9829207213829902 0.21131573118564762 0.1366656197680191 0.25052650122240927 14.83602475630127 0.020248854584723783 0.0794763630940759 2.307452157839849e-06 5.636867294766429 -0.20063601205479942 SIQEIQELDKDDESLRK ddPTM_A549_PD325901_60min_R1 2 SIQEIQELDKDDESLRK 17 2 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ; 169.28 3.0700999999999997e-30 13472700.0 4156.7 3318.5 3731.3 3653.2000000000003 4475.1 4869.1 3949.6 4291.6 4125.0 4160.9 4250.1 False True 4578.685123999193 3598.1616412767617 3984.5284561296567 3878.849866980826 4160.78441425689 4829.447663944963 4099.90418930405 4206.000671304931 3951.640595073908 3898.1800638963637 3727.364643603685 1.2283974233259978 0.9653366346787022 1.0689934678023185 1.0406413747678527 1.1162804855696025 1.2956735188848505 1.0999471694672156 1.1284113773313285 1.0601701129121053 1.045827397270027 1.0 11.863940247755014 -9.28202544491599 1.2517898176838753 1.0160753187548672 1.113453381336434 0.15602442553246998 0.08436070304498935 0.47489285744468107 1.5469530294745488 0.02005920447692199 0.017064809666240924 5.22365583181383e-10 9.28202544491599 0.09737806258156678 SIQPQVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SIQPQVSPR 9 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 SIQPQVS(1)PR;SIQPQVS(1)PR 127.83 5.1679e-05 86746000.0 5812.7 5947.0 4713.6 5393.4 6987.200000000001 6187.0 6144.6 5629.8 8613.9 8701.7 10005.8 True False 6793.741653129239 6249.676898309237 5382.059357872005 6714.783242118928 5959.392135887868 6841.704233401786 7260.99428300931 6427.841390539411 6662.865403571731 6735.979926406881 7521.083713968501 0.9032929178160312 0.8309543060532688 0.7155962574749963 0.8927946420338235 0.7923581710465225 0.9096700015045783 0.9654186230534648 0.8546429789900264 0.8858916689355754 0.8956129439028195 1.0 12.876724839666393 -14.301392614272128 0.11877433451757695 1.4125809963858347 0.7783169637950113 0.1941396724571337 0.06696772680909646 43.85149177804162 0.4284710341081604 4.511338103295824 0.24707711845999727 4.995826941403557e-15 14.301392614272128 -0.6342640325908234 SIRDT(ph)PAK ddPTM_A549_MK2206_60min_R1 11 SIRDTPAK 8 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 SIRDT(1)PAK;S(0.009)IRDT(0.991)PAK;SIRDT(1)PAK;SIRDT(1)PAK;S(0.267)IRDT(0.733)PAK;SIRDT(1)PAK;SIRDT(1)PAK;SIRDT(1)PAK;S(0.007)IRDT(0.993)PAK;S(0.001)IRDT(0.999)PAK;SIRDT(1)PAK 117.25 0.00050205 13899216600.0 74334.5 96668.3 78429.59999999999 95243.5 102050.8 75257.4 72817.40000000001 75848.3 144099.6 116242.6 111437.30000000002 True False 86880.34629596172 101588.30356630693 89552.09661705668 118578.16177564298 87039.26250587711 83221.08811618075 86047.37901630736 86600.02880067691 111461.27067977628 89983.31592600797 83764.34289698197 1.0371996399806058 1.2127869694058946 1.069095673885878 1.4156162117988196 1.039096822056168 0.9935144864507641 1.0272554650387837 1.0338531385267646 1.3306529583459819 1.0742436795173627 1.0 16.354048622600338 -5.223818948471015 21.07414233365745 1.1391225092763408 1.0371978050047461 0.011594197822148877 0.13545544180424957 7016.172168648153 3929707.121289024 0.02101220825695558 4.6299741062315745 5.972842344536107e-06 5.223818948471015 -0.10192470427159472 SIRDT(ph)PAK ddPTM_A549_PD325901_60min_R1 14 SIRDTPAK 8 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 S(0.004)IRDT(0.996)PAK;SIRDT(1)PAK;SIRDT(1)PAK;SIRDT(1)PAK;S(0.006)IRDT(0.994)PAK;SIRDT(1)PAK;SIRDT(1)PAK;S(0.001)IRDT(0.999)PAK;SIRDT(1)PAK;SIRDT(1)PAK;S(0.228)IRDT(0.772)PAK;SIRDT(1)PAK;SIRDT(1)PAK;SIRDT(1)PAK 143.22 0.00082786 27040975000.0 145532.5 159559.09999999998 153738.2 173544.29999999996 165093.99999999997 141367.19999999995 156583.50000000003 161258.8 183434.80000000002 162378.5 170252.5 True False 160306.85226463628 173005.70532970992 164171.79875489805 184263.73726329787 153498.36698338087 140215.95239334556 162542.3707782791 158042.36672891883 175725.6732677003 152125.8937983117 149312.52181951844 1.0736330102200486 1.158681825351732 1.0995179557233703 1.2340809398827697 1.0280341200647731 0.9390769821892878 1.0886050868175157 1.0584669309915788 1.1768984350830853 1.018842170398769 1.0 17.187975633944095 -11.120841413767874 1.4865588487204413 1.0002101734509659 1.1048089801589385 0.1531040208706821 0.07495780550907799 0.5603338101371957 2.223271923267619 0.057190187452944824 0.012465198397436919 7.571093092942104e-12 11.120841413767874 0.10459880670797261 SIRDT(ph)PAKNAQK ddPTM_A549_MK2206_60min_R1 3 SIRDTPAKNAQK 12 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 S(0.002)IRDT(0.998)PAKNAQK;S(0.021)IRDT(0.979)PAKNAQK;S(0.171)IRDT(0.829)PAKNAQK 85.006 0.00014944 759353000.0 6982.9 10827.1 10679.099999999999 8646.300000000001 12625.1 8573.3 7613.6 6379.1 14801.599999999999 14217.900000000001 14153.899999999998 True False 8161.442804486069 11378.15314371682 12193.55696042323 10764.643888147162 10767.964514368845 9480.520915504045 8996.89256796531 7283.356960174425 11449.06123329819 11006.066515239601 10639.09600223258 0.7671180711945278 1.0694661596557782 1.1461083684050273 1.0118006159440835 1.012112731392707 0.8911021118255337 0.8456444575814844 0.6845841938681666 1.0761310200505418 1.034492640439565 1.0 13.377087950642055 SIRDT(ph)PAKNAQK ddPTM_A549_PD325901_60min_R1 4 SIRDTPAKNAQK 12 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 S(0.003)IRDT(0.997)PAKNAQK;S(0.031)IRDT(0.969)PAKNAQK;S(0.046)IRDT(0.954)PAKNAQK;SIRDT(1)PAKNAQK 102.65 8.8371e-05 1435516000.0 15400.4 15786.3 21879.699999999997 21863.1 18240.3 33762.1 30506.1 29642.6 24792.200000000004 22098.300000000003 23282.199999999997 True False 16963.837270824733 17116.666903024674 23364.58801532442 23213.534032297317 16959.1642536189 33487.15265138859 31667.026329078446 29051.355088830172 23750.27005119788 20703.00956668054 20418.636998025853 0.8308016481445288 0.8382864588209082 1.144277554744883 1.13687970624786 0.8305727877555477 1.6400287959782158 1.550888354209937 1.4227862071125983 1.1631662805648655 1.0139271082923988 1.0 14.3175989449905 -5.7672358382495 5.649265075185792 1.1621238274804964 0.8302153453137167 0.25802905344411775 0.23477639221473437 0.18664663082705027 19.65115724828017 0.03524225011044951 0.12537065800985336 1.709086964500692e-06 5.7672358382495 -0.3319084821667797 SIRPGLSPYR ddPTM_A549_PD325901_60min_R1 1 SIRPGLSPYR 10 1 Q14697;Q14697-2 Q14697 GANAB Neutral alpha-glucosidase AB 0 60.255 0.008185600000000001 2492400.0 791.09 693.21 669.77 713.79 973.34 1159.2 685.45 585.29 847.01 815.72 982.59 False True 871.4008744303225 751.629239520707 715.2246198541951 757.8791871652919 904.9759562407104 1149.7598595315346 711.5351748426326 573.6159317988773 811.4131152566176 764.2152999883535 861.7376591512068 1.0112136392978737 0.8722251273793067 0.8299795329342762 0.8794778539814387 1.0501757079203111 1.3342342037877555 0.8256981313123527 0.6656503005379582 0.941601085480983 0.8868305706183124 1.0 9.751104922840621 -5.571420423450525 0.007388938161872621 1.8546444510667361 9.480960603332227e-07 0.0 0.16362259708518329 46596.47812722728 55.47050861187973 6608.270884841007 7328.957600914241 2.682746126915069e-06 5.571420423450525 -1.8546435029706758 SIRT(ph)PPR ddPTM_A549_PD325901_60min_R1 1 SIRTPPR 7 1 Q5VT98;Q5VXH4;Q5TYX0 Q5VT98 PRAMEF20;PRAMEF6;PRAMEF5 PRAME family member 20/21;PRAME family member 6;PRAME family member 5 1 S(0.021)IRT(0.979)PPR 46.158 0.025564 1940800000.0 852.8 873.98 805.56 1004.4 1170.5 916.25 1129.8 1085.7 1039.2 1017.6 1112.3 True False 939.375628201821 947.6333618330765 860.2301458257987 1066.4395068420954 1088.288118005785 908.7883637817196 1172.7951572502816 1064.0448617848263 995.5260379153463 953.3485623352976 975.4941514506432 0.9629741262978246 0.9714393063493663 0.8818403929398888 1.093230036547332 1.1156275169742509 0.9316184647855382 1.202257497398867 1.0907752344824422 1.0205351169301362 0.9772980810982688 1.0 9.929989412995036 -6.262494556240118 24.999681800840918 1.0359006616438773 0.9420200795511771 0.3010264510616244 0.07452211680274755 104.55784886279484 2477277.399519942 0.01038247875543413 0.025474172523635395 5.463933987273861e-07 6.262494556240118 -0.09388058209270023 SIS(ph)ADDDLQESSR ddPTM_A549_PD325901_60min_R1 2 SISADDDLQESSR 13 0 E9PD43;A0A0A0MSN9;A0A0A0MT02;A0A0G2JI50;A2ABK4;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.025)IS(0.975)ADDDLQESSR;S(0.01)IS(0.99)ADDDLQESSR 319.29 9.740599999999995e-156 259580000.0 17091.1 16532.5 15419.599999999999 17377.8 19445.0 18565.7 17396.2 13690.800000000001 13931.6 13047.3 14591.9 True False 18826.175890197166 17925.751795813794 16466.066781587324 18451.18723815268 18079.250281608274 18414.50709463821 18058.221910565895 13417.726253775167 13346.103300444032 12223.491251333855 12797.188805675303 1.4711180850788201 1.400756999682936 1.286694056923263 1.441815661105972 1.4127517032170753 1.4389493953915673 1.4111085008417963 1.048490137757807 1.0428933653401515 0.9551700328054061 1.0 13.643539303716782 -8.277185706370574 5.439721487548829 1.0219583136454136 1.4073399062727363 0.9379423063373505 0.0491679715673202 0.02854312590165735 2.872989696074238 0.007593076737009482 0.009412890970130353 5.2821933439607644e-09 8.277185706370574 0.38538159262732274 SIS(ph)CEEATCSDTSESILEEEPQENQK ddPTM_A549_PD325901_60min_R1 1 SISCEEATCSDTSESILEEEPQENQK 26 0 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.177)IS(0.798)CEEAT(0.005)CS(0.005)DT(0.005)S(0.005)ES(0.005)ILEEEPQENQK 79.9 1.2557e-06 4101800.0 658.85 817.02 749.45 601.16 525.11 321.36 670.51 827.92 499.3 742.18 548.0 True False 725.735966980265 885.8731427319391 800.3121838089595 638.2922878665814 488.22808513115615 318.7429507065684 696.0266249671506 811.4064861093249 478.31615736252127 695.3186281387688 480.59947405821487 1.51006400579697 1.843266983318907 1.665237327563155 1.328116908819724 1.0158731157329923 0.663219516274292 1.448246747109093 1.6883216272746888 0.9952490237319381 1.4467735935444346 1.0 8.908691259436802 -6.4451289889822885 2.7925653666518935 1.0616561837852385 1.6932953731375082 0.3080124742062612 0.2890834582157657 0.17686100066459576 2.681634067396025 0.04016477522332757 0.10182210430363282 3.588153477497259e-07 6.4451289889822885 0.6316391893522697 SIS(ph)ES(ph)SRSGKR ddPTM_A549_PD325901_60min_R1 1 SISESSRSGKR 11 2 Q9H307 Q9H307 PNN Pinin 2 S(0.124)IS(0.891)ES(0.52)S(0.449)RS(0.017)GKR 45.115 0.015416999999999998 10686000.0 2295.1 2064.3 2430.8 2321.4 2793.5 3053.4 2710.3 2438.6 2369.2 2395.0 2605.3 True False 2528.096862436681 2238.26580566148 2595.7687055878555 2464.7876057180815 2597.294197051827 3028.5341227515432 2813.4419496330693 2389.9602099553085 2269.630763114933 2243.779291266744 2284.864616357421 1.10645367972262 0.9796054390433734 1.1360711208028091 1.0787455799667893 1.1367387715043213 1.3254763985008862 1.2313385788775169 1.0459964204642607 0.993332710772696 0.9820184859984502 1.0 11.157892969378185 -8.482333780462106 6.488453440323237 0.9978571601270223 1.140225361212186 0.4025164385899105 0.0818359212974346 0.17542410898129304 20.75997707195861 0.014607365287858604 0.017494283954356236 3.2935648534605625e-09 8.482333780462106 0.14236820108516368 SIS(ph)ESS(ph)R ddPTM_A549_PD325901_60min_R1 1 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 2 S(0.005)IS(0.994)ES(0.011)S(0.99)R 72.87899999999999 0.022379 134240000.0 1869.5 2396.7 2620.8 2131.3 2538.1 2014.9 2112.2 1922.5 2302.1 2547.0 2543.3 True False 2059.2902637468387 2598.6783202193815 2798.6632481506717 2262.9455604665045 2359.832611969658 1998.4913224379652 2192.5809268401895 1884.1542293279256 2205.3507427683976 2386.1819853262605 2230.4902233070397 0.9232455906906549 1.1650704822935503 1.2547301121998327 1.0145507641415907 1.0579883235134062 0.8959874836281053 0.9830040517233722 0.8447265133197407 0.9887291680205758 1.069801589082235 1.0 11.123145109161218 -6.70274204987396 2.352223391754154 0.9762015193823621 1.1173032907439528 0.2715415163275401 0.09568726973805523 0.26447058920794225 2.9758730891347316 0.012986419918420585 0.029751344838111718 1.9827043075628026e-07 6.70274204987396 0.14110177136159074 SIS(ph)ESS(ph)RSGKR ddPTM_A549_PD325901_60min_R1 1 SISESSRSGKR 11 2 Q9H307 Q9H307 PNN Pinin 2 S(0.37)IS(0.628)ES(0.035)S(0.904)RS(0.063)GKR 56.599 0.01228 131620000.0 6321.2 6235.4 6622.6 6388.0 7329.7 9672.6 8090.6 8892.0 7521.0 7155.9 8211.5 True False 6962.923570578513 6760.8790411382015 7072.0494609289635 6782.572251799389 6814.8871580922705 9593.829552540306 8398.492210346192 8714.642084360947 7204.918524982022 6704.075252766468 7201.537556987278 0.9668662442540136 0.9388104953474098 0.9820193819675802 0.9418227979966044 0.9463100211815377 1.3321918377321955 1.1662082081620988 1.210108537989305 1.0004694786311936 0.9309227647173557 1.0 12.814089245248113 SIS(ph)LGDSEGPIVATLAQPLR ddPTM_A549_MK2206_60min_R1 2 SISLGDSEGPIVATLAQPLR 20 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 SIS(1)LGDSEGPIVATLAQPLR;S(0.008)IS(0.992)LGDSEGPIVATLAQPLR 426.45 0.0 39798000.0 4933.6 4947.8 4731.6 4575.9 6262.3 4724.4 4303.6 4791.7 6575.1 6707.9 5496.7 True False 5766.271065060714 5199.621886237504 5402.612028535978 5696.995705419959 5341.123965618649 5224.332872197088 5085.508413299298 5470.938148965803 5085.850348277146 5192.580731161123 4131.717688797561 1.39561109915495 1.2584649479647123 1.3075946701741572 1.378844377694628 1.2927127088329835 1.264445750096132 1.2308460539517925 1.3241316471837625 1.2309288125049178 1.2567607765748152 1.0 12.012525966046567 -10.62940064029119 0.32108714104074804 0.8793718715520652 1.3350593261267583 0.2016553821612581 0.08882202011261779 0.7589188386590066 0.10399298825776017 0.12526231939532403 0.01973213711735364 2.3474662644099678e-11 10.62940064029119 0.45568745457469306 SIS(ph)LGDSEGPIVATLAQPLR ddPTM_A549_PD325901_60min_R1 3 SISLGDSEGPIVATLAQPLR 20 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 S(0.023)IS(0.977)LGDSEGPIVATLAQPLR;SIS(1)LGDSEGPIVATLAQPLR;S(0.008)IS(0.933)LGDS(0.059)EGPIVATLAQPLR 473.38 0.0 108969000.0 32555.3 35219.1 36031.8 35527.4 40199.0 37114.2 37025.0 34205.1 35373.0 38800.4 37872.0 True False 35860.290090054834 38187.13715844221 38477.13462481509 37721.846809420415 37375.560919021416 36811.954260373794 38434.006635857404 33522.85244711814 33886.39582292105 36350.536122282334 33213.98409038814 1.0796744525578463 1.1497306994102299 1.1584618852138868 1.1357218305026169 1.1252959240694524 1.108326967345868 1.157163396335217 1.0092993468019207 1.0202448381592226 1.094434682191646 1.0 15.019503167210889 -8.268726119111273 24.921446531607558 1.0098076252178052 1.131563953271214 0.6548968655035232 0.03352751675953038 124.16655887460051 424662.59662316315 0.0034968580526985303 0.004273505212650621 5.386093408273747e-09 8.268726119111273 0.12175632805340886 SIS(ph)LKLDSEE ddPTM_A549_MK2206_60min_R1 1 SISLKLDSEE 10 1 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 S(0.001)IS(0.998)LKLDS(0.001)EE 65.842 0.004456100000000001 2121400.0 2273.7 2600.4 2146.5 2077.0 3255.6 2239.1 2130.6 2444.5 4102.6 3634.4 3029.6 True False 2657.444973372091 2732.7492527935688 2450.9059766786013 2585.865093240072 2776.705552667243 2476.0400758057126 2517.7024410668923 2791.0153609672775 3173.36765050597 2813.386515799578 2277.266707293668 1.1669449892982593 1.2000128241637547 1.0762489825319093 1.1355126235139783 1.2193150427984407 1.0872859414645681 1.105580840840097 1.2255988075653004 1.3934984603877336 1.2354224943388565 1.0 11.153087550557803 -8.264750460336993 24.139715435425476 1.1939942158691748 1.1419645842716892 0.1057100287147762 0.09477306215580339 647.0860023198043 4717640.118656856 0.02365656560011637 0.02919687871688069 5.435625653888779e-09 8.264750460336993 -0.052029631597485526 SIS(ph)LKLDSEE ddPTM_A549_PD325901_60min_R1 1 SISLKLDSEE 10 1 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 SIS(0.996)LKLDS(0.004)EE 65.842 0.004456100000000001 3376900.0 3751.7 4435.8 4175.9 4380.8 4489.4 4759.7 4496.7 5351.9 4358.2 5337.6 6364.1 True False 4132.569822144431 4809.620433441457 4459.301685726643 4651.392066481332 4174.08003158921 4720.9385812735045 4667.824379188657 5245.1521560156725 4175.040010048749 5000.583025079484 5581.356045353805 0.7404239737732885 0.8617297291838641 0.7989638448955044 0.8333802804702595 0.7478612720046627 0.8458407854491644 0.8363244238959425 0.9397630456458687 0.7480332693565137 0.8959441011189773 1.0 12.44639996625588 -10.940335921387144 1.079610182457465 1.0049818383324969 0.8147427781972852 0.3549037464642678 0.06305039966808997 0.2990131972156352 0.5916235052861567 0.044882767484655424 0.009425546150705339 1.1472658823043761e-11 10.940335921387144 -0.19023906013521164 SIS(ph)LSQSAENVPASK ddPTM_A549_MK2206_60min_R1 1 SISLSQSAENVPASK 15 0 H0YFN7;Q4ADV7-2;Q4ADV7-3;Q4ADV7 H0YFN7 RIC1 RAB6A-GEF complex partner protein 1 1 S(0.001)IS(0.743)LS(0.256)QSAENVPASK 166.92 8.7601e-21 4311800.0 2767.0 3386.5 3095.4 2750.9 4401.6 3087.7 3264.3 3567.9 5514.7 5193.9 5289.0 True False 3234.0019533450236 3558.8583850889922 3534.374265180969 3424.870623492593 3754.130470764262 3414.4383645506223 3857.3810562163994 4073.6607512354885 4265.629255166301 4020.5943826797884 3975.595331025945 0.8134635655964649 0.8951762160789616 0.889017611424975 0.8614736506918999 0.9442939127799681 0.8588495760380848 0.9702650131699799 1.02466685163961 1.0729535830462678 1.0113188209329722 1.0 11.956955199602083 -7.98598131290233 2.6489556638957077 1.0347109047731926 0.880328741913569 0.8021456643490855 0.034930985870458425 0.09292903878542708 1.3220094370789006 0.006197686024942959 0.008596045424785327 1.0328058450284879e-08 7.98598131290233 -0.15438216285962358 SIS(ph)NEGLTLNNSHVSK ddPTM_A549_MK2206_60min_R1 1 SISNEGLTLNNSHVSK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.172)IS(0.827)NEGLT(0.002)LNNSHVSK 128.29 1.7139e-10 5858300.0 1507.0 1438.2 1667.9 1753.9 1575.4 1185.8 1411.4 1451.8 2383.2 2030.9 2378.0 True False 1761.3447573874043 1511.3982369511266 1904.4333000243382 2183.605578735563 1343.660746919761 1311.2805689296647 1667.8331105424816 1657.5970959510314 1843.4090051883757 1572.118279478692 1787.476970538798 0.9853803917017646 0.845548368936774 1.0654309573847467 1.2216132653599225 0.751708004671379 0.7335929863948996 0.933065509671852 0.9273389941641502 1.0312910518968634 0.8795180611500742 1.0 10.803708939306402 -8.756075337473687 24.368512779013386 1.014776332089488 0.931399806786297 0.0 0.13574521617518207 202.74576404290835 921059.7500753785 0.02291923044293045 0.025611194136612475 1.7535762809232037e-09 8.756075337473687 -0.08337652530319106 SIS(ph)NEGLTLNNSHVSK ddPTM_A549_PD325901_60min_R1 2 SISNEGLTLNNSHVSK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.12)IS(0.88)NEGLTLNNSHVSK;S(0.101)IS(0.74)NEGLT(0.159)LNNSHVSK 154.84 1.1162000000000001e-20 26616200.0 6174.7 6335.2 5921.6 6364.4 7522.9 7545.6 7043.0 6246.5 5870.9 7359.299999999999 7627.8 True False 6801.550998426112 6869.0895373863295 6323.475385473525 6757.514533398873 6994.5174565960915 7484.151135335708 7311.025219077482 6121.9086572155475 5624.166489604702 6894.632542054005 6689.628956608117 1.0167306800637181 1.0268266867926865 0.9452654887872519 1.0101478837213682 1.04557629458459 1.118769244734082 1.0928894960393192 0.9151342618439597 0.840729213247181 1.030644985958957 1.0 12.707710477994212 -8.278870330134119 24.09861484514891 0.9219632091233534 1.035200111723389 0.29170015117237813 0.06331284903727263 425.63805432475385 588450.7973513321 0.011932496309432045 0.01444594144502815 5.2617434591844745e-09 8.278870330134119 0.11323690260003572 SIS(ph)PEVSASR ddPTM_A549_MK2206_60min_R1 2 SISPEVSASR 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 S(0.332)IS(0.668)PEVSASR;S(0.438)IS(0.562)PEVSASR 180.81 1.4353e-12 108023000.0 6168.799999999999 6304.1 5314.9 5809.5 7445.5 5504.1 4881.3 4597.6 8537.3 7717.299999999999 8196.9 True False 7209.942627320122 6624.951763011817 6068.632739552342 7232.827760798365 6350.27681299421 6086.540208674116 5768.169025429371 5249.323879559487 6603.615181266668 5973.956570102378 6161.383507068743 1.170182414233492 1.0752376889721664 0.9849464381806471 1.1738966990937003 1.0306576121594697 0.9878528420915916 0.9361808137428468 0.8519716186368076 1.071774735932371 0.9695803812972628 1.0 12.589038621731117 -2.000000000110272 0.5826577923025049 1.0136881698727989 9.44263404924139 0.3067385069081513 0.07633312692070689 158.76910617777642 1.189295926591907 0.013750931781888564 1700.9018729318789 0.009999999997460898 2.000000000110272 8.428945879368591 SIS(ph)PEVSASR ddPTM_A549_PD325901_60min_R1 2 SISPEVSASR 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 S(0.08)IS(0.92)PEVSASR;S(0.068)IS(0.777)PEVS(0.154)AS(0.001)R 160.91 8.875200000000001e-09 130458000.0 8839.0 9326.6 9513.5 9037.0 11039.099999999999 10105.8 9455.2 10106.2 10616.3 9921.400000000001 11317.0 True False 9736.328773072117 10112.585313705544 10159.143319322879 9595.194965483885 10263.751698827562 10023.501715367316 9815.02281008397 9904.62391283947 10170.13383017772 9294.961110803288 9925.08074437375 0.9809823238557901 1.0188919943485684 1.023582939119343 0.966762408549989 1.034122740477028 1.0099163899547474 0.9889111295792562 0.9979388750518854 1.0246902863679859 0.9365123922112513 1.0 13.276863123848035 SIS(ph)PEWK ddPTM_A549_MK2206_60min_R1 2 SISPEWK 7 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 S(0.449)IS(0.551)PEWK;S(0.379)IS(0.621)PEWK 109.71 0.008599200000000001 32354000.0 12916.2 11470.0 7844.200000000001 7115.8 16884.2 14192.5 11711.3 12376.3 18139.0 18036.4 18944.8 True False 15096.138789228395 12053.774007668908 8956.625512351406 8859.1713194404 14400.556546364493 15694.340929780956 13839.091616477377 14130.678425829135 14030.545462030857 13961.964713176172 14240.283310119185 1.0601010148794607 0.846456053237611 0.6289639972251677 0.6221204400578919 1.0112549190739357 1.1021087564057461 0.9718269865209269 0.9923031809197108 0.9852715115619022 0.9804555435533198 1.0 13.797690228524976 -6.790472427897905 24.966252469353513 1.0006463453763679 0.7820245926340023 0.4555491310134062 0.11378873314930397 138.54299374722362 119136.28096193488 0.016489744712572488 0.031166361895624235 1.620046842732969e-07 6.790472427897905 -0.21862175274236562 SIS(ph)PEWK ddPTM_A549_PD325901_60min_R1 2 SISPEWK 7 0 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 S(0.221)IS(0.779)PEWK;S(0.035)IS(0.965)PEWK 128.12 0.005767100000000001 55353000.0 21216.6 15667.8 14035.7 15287.800000000001 13386.0 14846.9 12932.5 10537.3 20974.7 17261.8 26152.0 True False 23370.49361316459 16988.180492148884 14988.247005520592 16232.092684887093 12445.813539193032 14725.991768873997 13424.653364435548 10327.125285148068 20093.206300484035 16171.887002082782 22935.46979118693 1.0189672950211301 0.7406946815049186 0.6534964028197017 0.7077288075051489 0.54264480529522 0.642061919940813 0.5853227985586779 0.45026874876207323 0.8760756367068161 0.7051038042524383 1.0 14.485292838243542 -8.943483473136363 7.644323142276388 0.9458637126931576 0.6625771317028409 0.19548676204950188 0.15436063093499874 0.15188229251054758 17.320847570994324 0.024560840604624556 0.02594510268594575 1.1389811244194254e-09 8.943483473136363 -0.28328658099031667 SIS(ph)QQK ddPTM_A549_PD325901_60min_R1 1 SISQQK 6 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SIS(1)QQK 80.229 0.0156 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SIS(ph)REPS(ph)PALGPNLDGSGLLPR ddPTM_A549_MK2206_60min_R1 2 SISREPSPALGPNLDGSGLLPR 22 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 2 S(0.457)IS(0.599)REPS(0.943)PALGPNLDGS(0.001)GLLPR;S(0.486)IS(0.524)REPS(0.99)PALGPNLDGS(0.001)GLLPR 60.093 0.00044839 12768500.0 1221.71 1347.08 1202.79 930.22 1669.63 1652.1399999999999 1730.1 1858.4 2008.21 2097.15 2018.75 True False 1427.9047800582398 1415.6406181561147 1373.3637082176824 1158.1239417591623 1424.0296387454873 1826.9683581982251 2044.436775222863 2121.8338911113087 1553.3536414523942 1623.4023584660688 1517.4386603343971 0.9409967054243716 0.9329145586973188 0.905053854311999 0.7632097244075403 0.9384429670664083 1.2039816870064568 1.3472945092702011 1.3982996127459422 1.0236681600757966 1.069830630325657 1.0 10.567422484029395 -7.054355693251482 8.329411534007818 1.0834180296918652 0.8854225526068351 0.43233402253094366 0.1397091620529522 0.3932983607177123 56.75522880056156 0.024823739618732993 0.04323117118451877 8.823569417329982e-08 7.054355693251482 -0.19799547708503007 SIS(ph)REPS(ph)PALGPNLDGSGLLPR ddPTM_A549_PD325901_60min_R1 1 SISREPSPALGPNLDGSGLLPR 22 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 2 S(0.467)IS(0.535)REPS(0.999)PALGPNLDGSGLLPR 68.234 0.00021258 15068000.0 913.04 1105.5 906.58 1118.5 1235.8 1426.6 956.83 1058.7 773.82 1092.2 1130.3 True False 1005.7311486554775 1198.6643647525877 968.1059705084077 1187.5872047021935 1149.0016712785555 1414.9822425877228 993.2426892474668 1037.5833979659167 741.2990364315369 1023.2383056039821 991.2802655620434 1.014577999376635 1.2092083403606952 0.9766218537191436 1.1980337407694146 1.1591087921306353 1.4274290447872942 1.0019796860218042 1.0467104349924892 0.7478198267280443 1.032239156928862 1.0 9.953149199327475 -8.325695682994313 2.3987101432021065 0.8831303375344014 1.1566929505028618 0.2944467859225788 0.1383417581734359 0.21111101241533806 2.3820376295650405 0.024357130922860733 0.030485295914095982 4.7239393921476815e-09 8.325695682994313 0.2735626129684604 SIS(ph)SPKVPPYPEVFR ddPTM_A549_MK2206_60min_R1 1 SISSPKVPPYPEVFR 15 1 Q5VTI5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(0.098)IS(0.48)S(0.423)PKVPPYPEVFR 51.486999999999995 0.0059628 2076300.0 1367.2 1748.0 1455.5 1470.8 1817.1 1560.0 1388.0 1134.9 2192.9 2337.7 2370.9 True False 1597.9499351692498 1836.9657336883397 1661.9117861894733 1831.146066026721 1549.8069970978145 1725.0781645558077 1640.181633436988 1295.7755504854838 1696.2116513417207 1809.6119463968378 1782.140096488829 0.8966466431665667 1.0307639322562396 0.9325371161693576 1.027498382217225 0.8696325278530251 0.9679812310797312 0.920343825195602 0.7270896115509773 0.9517835633032418 1.015415089959613 1.0 10.799395038225144 -9.555625335676472 1.9966156742120431 0.9863912171705482 0.9260979813567561 0.13076110825856835 0.07886433956740393 0.5209249554812502 4.175505120157612 0.017650128681618662 0.01432857671056693 2.7821123513198017e-10 9.555625335676472 -0.06029323581379209 SIS(ph)SPKVPPYPEVFR ddPTM_A549_PD325901_60min_R1 1 SISSPKVPPYPEVFR 15 1 Q5VTI5;Q9Y2H5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(0.073)IS(0.492)S(0.435)PKVPPYPEVFR 61.102 0.0014914000000000001 4086600.0 2129.1 2576.1 2644.4 2167.3 2465.8 3050.9 2707.7 2771.2 2907.5 2774.6 2979.9 True False 2345.244664639421 2793.196987823738 2823.8648860690005 2301.1691987045742 2292.610714548197 3026.0544819226698 2810.7430052102923 2715.9262420356563 2785.3078861036092 2599.411282483802 2613.3911911424693 0.8973951823929485 1.0688017152926366 1.0805366206329488 0.8805299438154897 0.8772550861572163 1.1579033755753194 1.0755156039159788 1.039234482476526 1.0657829932020184 0.9946506635875834 1.0 11.351707378428223 -7.250942604378062 24.974091821468942 1.0441000920488246 0.9690791162531508 0.27121364061309594 0.07543846694656452 968.5812529968248 2304462.350214858 0.011439285973189387 0.019674683874681975 5.611221280809495e-08 7.250942604378062 -0.0750209757956738 SIS(ph)SPNVNR ddPTM_A549_PD325901_60min_R1 2 SISSPNVNR 9 0 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 S(0.01)IS(0.495)S(0.495)PNVNR;S(0.003)IS(0.991)S(0.006)PNVNR 157.97 1.1288e-05 321040000.0 16811.8 16538.6 18261.3 17892.8 19837.6 18622.5 17704.8 21194.0 21441.1 20876.7 21401.2 True False 18518.521559806963 17932.36586422175 19500.621632117607 18997.99761850284 18444.27541200475 18470.844534270203 18378.5658524383 20771.269043628632 20540.00513043372 19558.541599160082 18768.988073384433 0.9866553000834047 0.955425289531242 1.0389809805340904 1.0122014859950363 0.9826995115501115 0.9841150978439261 0.9791985471236047 1.1066802835835117 1.094358686260806 1.042066920320296 1.0 14.196063249171381 -8.228167846517515 24.972905066242536 1.0504624381318886 0.9919711878083605 0.4968838217901065 0.03302635560629768 605.9980196320862 454849.8034820315 0.006914489274737062 0.008926264705075132 5.9133305108346e-09 8.228167846517515 -0.05849125032352809 SIS(ph)SPSVSSETMDKPVDLSTRK ddPTM_A549_MK2206_60min_R1 1 SISSPSVSSETMDKPVDLSTRK 22 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.072)IS(0.4)S(0.363)PS(0.13)VS(0.024)S(0.01)ET(0.001)MDKPVDLSTRK 60.943000000000005 0.00029911 7735900.0 1161.7 1543.2 1393.6 1148.9 2413.1 1652.2 1568.7 1261.4 2152.7 2199.9 2173.0 True False 1357.766559161876 1621.7422884598657 1591.2334354061506 1430.3805515760819 2058.136186614241 1827.0347073584014 1853.7124844183031 1440.2073128754855 1665.1168871555114 1702.9410621030956 1633.3841282509693 0.8312597971769048 0.992872564640646 0.9741942558913232 0.875715961013859 1.26004419353462 1.1185578920218806 1.1348907169823315 0.8817321583855857 1.0194276155594346 1.042584553534635 1.0 10.673648398742028 -4.329869729194643 0.9620682552091182 1.0255880239241322 4.866670591032228e-09 0.24032090075235246 0.10482970735918419 11.741070852877893 2.179853946972084 0.015607417820025117 19.217864931673965 4.678754639843706e-05 4.329869729194643 -1.0255880190574616 SISASKAS(ph)PPGDLQNPK ddPTM_A549_MK2206_60min_R1 2 SISASKASPPGDLQNPK 17 1 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 S(0.003)IS(0.115)AS(0.004)KAS(0.878)PPGDLQNPK;SIS(0.002)AS(0.002)KAS(0.996)PPGDLQNPK 154.42 1.3349000000000001e-22 115771000.0 19735.6 22291.0 23277.0 19538.3 27617.0 20200.9 20069.8 17514.9 32736.0 32819.0 31499.0 True False 23066.48679090568 23425.516687440926 26578.02861362584 24325.18437710763 23554.575884018694 22338.545829727842 23716.2228723009 19997.690712131644 25321.34826865 25405.165106214576 23676.92897182572 0.9742178480306111 0.9893815500868394 1.1225285443586148 1.02737920133364 0.9948323919899992 0.9434731107361735 1.001659586026631 0.8446066099166757 1.069452389656659 1.0729924111545617 1.0 14.531194347153184 -3.999047618099817 15.686787594425944 1.012768243172429 1.01160930315035 0.0 0.07059628653590694 0.0 0.0 0.009140522364040586 0.0 0.00010021953466185244 3.999047618099817 -0.001158940022079058 SISASKAS(ph)PPGDLQNPK ddPTM_A549_PD325901_60min_R1 4 SISASKASPPGDLQNPK 17 1 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 SIS(0.013)AS(0.003)KAS(0.983)PPGDLQNPK;S(0.092)IS(0.092)AS(0.027)KAS(0.789)PPGDLQNPK;SISAS(0.004)KAS(0.996)PPGDLQNPK;SIS(0.006)AS(0.022)KAS(0.972)PPGDLQNPK 171.29 2.1244999999999998e-30 251233000.0 42091.700000000004 42805.7 47319.0 45590.5 54992.0 54696.100000000006 48922.5 52698.9 52272.299999999996 52860.0 54259.700000000004 True False 46364.81839772817 46413.08656561718 50530.351892262544 48406.5216414621 51129.55163210096 54250.673096034174 50784.272508919224 51647.77909801273 50075.477012819814 49522.41057885597 47586.10088057758 0.9743353109363941 0.975349644260533 1.06187207939297 1.017240764544745 1.0744639860369325 1.1400529165476712 1.067208104239677 1.085354297626283 1.0523130932389184 1.0406906567768133 1.0 15.538252627056695 -5.752065533911547 24.49092688838002 1.0444088698400988 0.9748424169452216 0.38687308378718566 0.0373429588805514 156.92578955933527 409986.19741843815 0.006197167400465206 0.02332214042502143 1.7698418736157647e-06 5.752065533911547 -0.06956645289487728 SISASKAS(ph)PPGDLQNPKR ddPTM_A549_PD325901_60min_R1 2 SISASKASPPGDLQNPKR 18 2 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 SIS(0.001)AS(0.001)KAS(0.998)PPGDLQNPKR;S(0.062)IS(0.058)AS(0.054)KAS(0.826)PPGDLQNPKR 64.295 0.00050975 25431000.0 4272.4 4567.4 4564.2 5531.799999999999 5150.0 7629.5 5381.1 6523.299999999999 6663.200000000001 6165.799999999999 6423.5 True False 4706.130902825351 4952.310827291696 4873.954058764229 5873.486722370672 4788.281766535495 7567.367881552667 5585.880705150905 6393.187664070144 6383.168875902167 5776.490335737992 5633.450221921428 0.8353905186758193 0.879090190239151 0.8651809933099658 1.0426091455490618 0.8499732096509646 1.3432918697152574 0.9915558822929834 1.1348618363915512 1.1330833901865967 1.0253912093267377 1.0 12.459803060158865 -6.539253289710615 1.3164535329139928 1.0779195593056197 0.8535292518469582 0.412163874738281 0.11272065626062196 0.34452240616870405 1.1491721662303276 0.016538682058876736 0.05480315373660526 2.8889944683627076e-07 6.539253289710615 -0.2243903074586615 SISCEEAT(ph)CSDTSESILEEEPQENQK ddPTM_A549_PD325901_60min_R1 1 SISCEEATCSDTSESILEEEPQENQK 26 0 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.169)IS(0.186)CEEAT(0.201)CS(0.201)DT(0.201)S(0.022)ES(0.022)ILEEEPQENQK 67.61399999999999 0.00022227 3162200.0 401.79 672.33 330.01 165.51 272.38 281.44 318.97 317.32 198.25 290.93 468.84 True False 442.57942501783504 728.9896086423405 352.4064631113412 175.73317679951734 253.24896845998802 279.14804595113446 331.1085778970813 310.9908036672758 189.9182419329459 272.5606301495757 411.17565222163006 1.076375565105878 1.7729396298237128 0.8570703571752071 0.4273919816263693 0.6159143108101228 0.6789021782852778 0.8052728222307498 0.756345376937949 0.4618907780818136 0.6628812495995294 1.0 8.683611027606378 -5.903223648069585 6.570768543143392 0.712363602369379 1.4172283848936222 0.6415078711030515 0.2120468193010705 0.10907798558276179 6.278872345881469 0.033274356789312017 0.10542785098255243 1.2496153516877594e-06 5.903223648069585 0.7048647825242432 SISEQRPPQAPKKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SISEQRPPQAPKKSPK 16 3 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.004)IS(0.004)EQRPPQAPKKS(0.992)PK;S(0.001)IS(0.001)EQRPPQAPKKS(0.998)PK 49.224 0.0040452 23923900.0 2268.7 2632.8 2284.8 2304.28 3606.2 2539.0 2653.8599999999997 2351.3 3660.1000000000004 3819.9 3734.6000000000004 True False 2651.6010956103537 2766.79827440198 2608.8189962801166 2868.828703443061 3075.7327571042524 2807.675294748203 3136.0320098797456 2684.6039755542483 2831.093193978673 2956.9819369642305 2807.195750283511 0.9445729231182245 0.9856093128249246 0.9293327677689168 1.0219553457051669 1.0956602355904894 1.0001708268704252 1.117140480696091 0.9563294527227459 1.0085129238645891 1.0533579415206766 1.0 11.454913953470367 -6.274790573384405 24.11588247854182 1.0160054061295911 0.9564154327844361 0.32426882033187643 0.046567714515853856 471.5910700144422 851821.4593324685 0.006198663934045626 0.01448787256264313 5.311405104451506e-07 6.274790573384405 -0.059589973345155034 SISEQRPPQAPKKS(ph)PK ddPTM_A549_PD325901_60min_R1 3 SISEQRPPQAPKKSPK 16 3 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.005)IS(0.023)EQRPPQAPKKS(0.972)PK;SIS(0.001)EQRPPQAPKKS(0.999)PK;S(0.001)IS(0.003)EQRPPQAPKKS(0.996)PK 54.658 0.0023734000000000003 58516000.0 5090.9 4777.7 5468.9 5658.5 6446.0 7211.0 6292.700000000001 6383.900000000001 6240.9 6716.799999999999 6230.7 True False 5607.724420277503 5180.333546339607 5840.052441167275 6008.012693614094 5993.255197492773 7152.276006799429 6532.172141997565 6256.568106427333 5978.616676314363 6292.700101703736 5464.363399661527 1.026235630782692 0.9480214194137393 1.0687525726288662 1.099489959614736 1.0967892797656917 1.308894647680726 1.1954132008135072 1.1449765780246015 1.0941103727992705 1.1515888753104375 1.0 12.415837715847939 -4.0495353914332295 11.257563669092285 1.0767947681521244 0.6186502931001482 0.0 0.09746757116745101 0.0 0.0 0.013938763367485143 0.0 8.922049092531745e-05 4.0495353914332295 -0.4581444750519762 SISES(ph)SR ddPTM_A549_MK2206_60min_R1 1 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 1 SISES(0.528)S(0.472)R 77.318 0.017281 43102000.0 2279.8 3146.1 2468.4 1592.9 1560.3 1832.8 1611.8 1542.2 2066.3 2320.1 2404.1 True False 2664.5745042414123 3306.223051920414 2818.456237052627 1983.1605715079982 1330.781936916911 2026.7456794858244 1904.643196522866 1760.81157278942 1598.2863492030633 1795.98779862057 1807.0956202154416 1.4745066472596189 1.8295783659340874 1.5596608201156565 1.0974297924929761 0.7364203211107642 1.1215486645052 1.0539803069722424 0.9743876046689197 0.8844503474655735 0.9938532186838307 1.0 10.819457131296705 -6.282682022146682 3.33860344843541 0.9554717471327796 1.6597323293542365 0.8480096595810762 0.12139312877028408 0.058334689087290476 1.3530139918445252 0.016188542823655134 0.04335247552113262 5.215764545254473e-07 6.282682022146682 0.7042605822214569 SISESS(ph)R ddPTM_A549_PD325901_60min_R1 2 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 1 SISES(0.068)S(0.932)R;SIS(0.001)ES(0.232)S(0.767)R 85.666 0.0135 99219000.0 4962.3 4677.8 5021.9 4495.9 4898.299999999999 4411.8 4412.4 3895.7 4658.4 4429.5 4882.6 True False 5466.06904294782 5072.014622740529 5362.716333137914 4773.6015320702645 4554.260306217634 4375.871763527628 4580.316296557926 3817.99720738247 4462.623648022373 4149.820614056802 4282.071153351534 1.276501218030808 1.1844769601202714 1.252365068464724 1.1147879988715308 1.0635648365284776 1.0219054300633648 1.0696497401667318 0.8916239526739677 1.0421647581753803 0.9691152868416908 1.0 12.064093053233368 -6.559590490688133 1.3393452553297698 1.0130613095205778 1.2439684676424432 0.808648184530379 0.04931601964248687 0.1368500391229682 0.47550752446793815 0.006934866151209294 0.022309692331835426 2.75682697311196e-07 6.559590490688133 0.23090715812186535 SISGTSTSEKPNSMDT(ph)ANTSPFKVPGFFSK ddPTM_A549_MK2206_60min_R1 1 SISGTSTSEKPNSMDTANTSPFKVPGFFSK 30 2 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.005)IS(0.005)GT(0.005)S(0.005)T(0.005)S(0.005)EKPNS(0.128)MDT(0.28)ANT(0.28)S(0.28)PFKVPGFFSK 47.286 0.0056578999999999996 4873000.0 1615.6 1817.4 1052.9 1863.3 2118.0 1355.5 1729.7 1480.6 1893.1 2272.5 2331.2 True False 1888.273782372323 1909.8978972569726 1202.2170523386446 2319.8085836467153 1806.4450056976348 1498.9381102919217 2043.964100400547 1690.4795841473313 1464.3158726594977 1759.1406716802053 1752.298702153089 1.0775981172913947 1.0899385446729133 0.6860799764683119 1.3238659486515136 1.0309001561651647 0.855412441069632 1.166447305981042 0.9647211300620157 0.8356542585235381 1.003904568050361 1.0 10.775033006737896 -8.516043306268191 24.668908881584834 0.921223623305842 1.028860463795199 0.05166898016549504 0.15954910268331382 503.97806863376246 1818847.0844424635 0.025762350888556208 0.029772508355414833 3.0475910797635286e-09 8.516043306268191 0.10763684048935707 SISGTSTSEKPNSMDT(ph)ANTSPFKVPGFFSK ddPTM_A549_PD325901_60min_R1 1 SISGTSTSEKPNSMDTANTSPFKVPGFFSK 30 2 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.001)IS(0.002)GT(0.002)S(0.002)T(0.002)S(0.002)EKPNS(0.074)MDT(0.304)ANT(0.304)S(0.304)PFKVPGFFS(0.001)K 42.038999999999994 0.030751999999999998 9198700.0 1983.1 1732.0 2118.9 1885.9 2392.7 2197.0 1963.9 2883.3 2146.9 2139.7 2464.6 True False 2184.4228521189393 1877.9617184545282 2262.701295980792 2002.387759810342 2224.6450063668885 2179.108360413028 2038.6372891873161 2825.7903195949066 2056.673259045859 2004.5989768365137 2161.4698243866355 1.0106191756522982 0.8688355013179242 1.0468345523273188 0.926400978268833 1.0292278806150719 1.0081604359345604 0.9431717557129553 1.3073466433410823 0.9515160636718513 0.9274239937193491 1.0 11.077796980016126 -5.776962548708616 24.996139066977523 1.002083722452469 0.9397272776782645 0.05929999944554831 0.10589323356077357 507.3215335216244 816916.5228430093 0.013722799472110794 0.04287685227955925 1.671234726664634e-06 5.776962548708616 -0.062356444774204545 SISGTSTSEKPNSMDTANT(ph)SPFKVPGFFSK ddPTM_A549_MK2206_60min_R1 1 SISGTSTSEKPNSMDTANTSPFKVPGFFSK 30 2 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.001)IS(0.001)GT(0.001)S(0.005)T(0.005)S(0.005)EKPNS(0.026)MDT(0.119)ANT(0.417)S(0.417)PFKVPGFFS(0.001)K 42.347 0.019882 2952500.0 1307.0 1029.1 1076.8 1286.4 1662.9 1377.6 1119.8 1269.0 1861.0 1748.5 1858.3 True False 1527.5896469179413 1081.476794358507 1229.5064317202514 1601.5680577486905 1418.2896128303091 1523.3767176231293 1323.2531650740198 1448.8846361495098 1439.4864714063299 1353.5126356140102 1396.8328235291194 1.0936095008552726 0.7742349522014663 0.8802101518590354 1.146571036111755 1.0153610288502377 1.0905934425096733 0.9473239336764728 1.037264167725441 1.0305359719207094 0.9689868485437934 1.0 10.447943650364573 -6.2207628260857035 24.98405334609425 1.024134504298002 0.9018398310407575 0.2480521633306153 0.0867325611912534 454.296383318428 279034.07928492484 0.010594432603172263 0.02802989585978674 6.015021360116308e-07 6.2207628260857035 -0.12229467325724441 SISGTSTSEKPNSMDTANT(ph)SPFKVPGFFSK ddPTM_A549_PD325901_60min_R1 1 SISGTSTSEKPNSMDTANTSPFKVPGFFSK 30 2 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.002)IS(0.002)GT(0.002)S(0.002)T(0.002)S(0.002)EKPNS(0.09)MDT(0.09)ANT(0.405)S(0.405)PFKVPGFFSK 68.304 0.00023603 10504000.0 2211.8 2118.8 2267.8 2348.4 2937.0 1972.6 2293.2 2655.9 2214.2 2901.8 2202.8 True False 2436.340307758897 2297.3587119292483 2421.7065453892296 2493.455334396632 2730.71525209995 1956.535799613445 2380.46898088719 2602.9259909867565 2121.144874087913 2718.579852775715 1931.869564699699 1.2611308507971737 1.1891893499996016 1.2535559282262796 1.2906954899847132 1.4135091219393108 1.0127680643478538 1.23220999201218 1.3473611461917567 1.0979752012489705 1.4072274352530147 1.0 10.91578197473979 -8.951283253160412 4.361023425195475 1.0411210094005143 1.2464036309249267 0.0 0.14620686895273935 0.13089793220698057 4.911159736506237 0.01739740500564202 0.018054100835992785 1.1187080078860283e-09 8.951283253160412 0.20528262152441235 SISLGDS(ph)EGPIVATLAQPLR ddPTM_A549_PD325901_60min_R1 1 SISLGDSEGPIVATLAQPLR 20 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 SIS(0.268)LGDS(0.732)EGPIVATLAQPLR 200.33 6.9421e-55 37461000.0 1590.1 1602.0 1424.0 1764.2 1749.1 1795.4 1781.9 1869.8 1742.7 1845.4 2085.6 True False 1751.5257814302493 1737.0061622194896 1520.6412032076303 1873.1706272110969 1626.2492500674234 1780.7788576629728 1849.711179593094 1832.5053721702766 1669.460379402497 1728.881129062066 1829.084421707688 0.9575970144641942 0.949658824712841 0.8313674235921347 1.0241028817369997 0.8891056261630113 0.9735903037216752 1.011277094507288 1.001870307582301 0.9127300848387515 0.9452166934142552 1.0 10.83690594912447 -6.28206175372808 24.990608506127128 0.9643718450171662 0.9165528296241351 0.1992377413531311 0.04978532627526892 1155.9840850767202 1400842.736001161 0.007308894395362239 0.01700058135100641 5.223219130870651e-07 6.28206175372808 -0.04781901539303113 SISLS(ph)QSAENVPASK ddPTM_A549_PD325901_60min_R1 1 SISLSQSAENVPASK 15 0 H0YFN7;Q4ADV7-2;Q4ADV7-3;Q4ADV7 H0YFN7 RIC1 RAB6A-GEF complex partner protein 1 1 SIS(0.198)LS(0.799)QS(0.002)AENVPASK 220.34 1.8222999999999997e-46 12960000.0 5607.6 5884.9 6282.1 6101.4 6580.7 6968.2 5923.0 6098.1 6474.4 6194.1 6604.7 True False 6176.879423903065 6380.8411760583485 6708.441083336128 6478.269620715211 6118.49433418255 6911.453289499347 6148.403006189961 5976.468611633094 6202.303483332483 5803.003468908279 5792.363770642865 1.066383201830144 1.1015953812151842 1.158152586572026 1.1184155341811726 1.0563035362510544 1.1932008353011778 1.0614670020124757 1.0317840605804693 1.0707724391840328 1.0018368491149223 1.0 12.499936493716948 -9.483530586479553 0.3746188841843508 0.9938340695015949 1.1168426290947528 0.4759446831067843 0.041892596946324544 0.8348737170576225 0.27746914034928505 0.03975209493120777 0.01915199476605355 3.284501114132702e-10 9.483530586479553 0.12300855959315793 SISLYYTGEK ddPTM_A549_MK2206_60min_R1 1 SISLYYTGEK 10 0 P19338;H7BY16 P19338 NCL Nucleolin 0 91.867 0.0017506 2850500.0 1077.1 1660.1 1581.6 1067.2 1934.3 1698.3 1413.7 1267.9 2006.6 2120.2 2035.7 False True 1258.8881474332936 1744.5919991395954 1805.8946623409634 1328.664047908429 1649.7670323517152 1878.0129787596973 1670.5509907708008 1447.628707780902 1552.1083038817526 1641.2453474571496 1530.1795075381958 0.8227061865824064 1.140122443507529 1.180184843310539 0.8683060002849132 1.0781526116539855 1.2273154682231417 1.091735304610398 0.9460515584278708 1.0143308652583098 1.0725835363575351 1.0 10.579485192118721 -8.242235502464672 23.803133913585025 1.002402751882903 1.0661403823705502 0.03698467117592785 0.11751355688259613 1014.2997051033433 1257221.4609580531 0.017832623215729492 0.023001742897302772 5.724855082531405e-09 8.242235502464672 0.06373763048764713 SISREPS(ph)PALGPNLDGSGLLPR ddPTM_A549_MK2206_60min_R1 2 SISREPSPALGPNLDGSGLLPR 22 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 S(0.005)IS(0.018)REPS(0.977)PALGPNLDGSGLLPR;S(0.009)IS(0.008)REPS(0.983)PALGPNLDGSGLLPR 71.085 0.00012457 10875900.0 2122.9 2257.2 1939.93 1933.67 3284.8999999999996 2713.12 2110.73 2325.3 3398.2 3445.6 3603.5 True False 2481.193620078116 2372.081838719288 2215.041244508791 2407.419236805745 2801.695561480716 3000.220557576701 2494.2223192683377 2654.918395932589 2628.5131258103142 2667.2365669268725 2708.6514984594437 0.9160254176254512 0.8757427229263045 0.8177653145000766 0.8887888449935233 1.0343506955672193 1.1076436224014379 0.9208354491845616 0.9801624156679383 0.9704139226863594 0.9847101291708711 1.0 11.403359069568776 -6.662788400775542 6.047359445637071 0.9922832862538926 0.8681379254824698 0.6043406855363009 0.048558205093518214 0.11447182014693938 5.9443610272008645 0.0069927417871143 0.014655451733819254 2.1737600316023847e-07 6.662788400775542 -0.1241453607714228 SISREPS(ph)PALGPNLDGSGLLPR ddPTM_A549_PD325901_60min_R1 2 SISREPSPALGPNLDGSGLLPR 22 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 SISREPS(1)PALGPNLDGSGLLPR;SISREPS(1)PALGPNLDGSGLLPR 162.26 1.8625e-33 23792000.0 3484.1 4494.9 3873.3 4345.1 4857.3 4674.4 4292.9 4090.6 4739.6 5057.6 4836.4 True False 3837.8032671411424 4873.700997852921 4136.165430045025 4613.486958561918 4516.140004775313 4636.333236192381 4456.268658665015 4009.0097739863772 4540.411094402978 4738.262272864584 4241.553460465602 0.9048107734376784 1.1490367959002283 0.9751534357864703 1.0876880373106244 1.0647372588531676 1.0930743368924656 1.0506218299971264 0.9451748778727644 1.0704594759262023 1.1171053994789109 1.0 12.050377030405247 -5.220433284891842 23.396536415513296 1.0403309353975578 0.9048098321780598 0.3184092215791374 0.059752909855166465 10847.383669256835 6188814.34196957 0.007184710496013238 3.513601251923733 6.01958727019651e-06 5.220433284891842 -0.13552110321949806 SISS(ph)PNVNR ddPTM_A549_MK2206_60min_R1 1 SISSPNVNR 9 0 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 S(0.001)IS(0.237)S(0.762)PNVNR 51.528 0.025855 12313000.0 1453.5 2012.8 1579.1 1737.9 2344.2 2033.6 1819.5 1752.4 3069.7 2310.2 2767.1 True False 1698.8152653368224 2115.2429226360914 1803.040124748746 2163.685578017297 1999.3712853429631 2248.7942022055718 2150.0795980105177 2000.8080664999216 2374.4178513036068 1788.324215496417 2079.9527019251063 0.8167566809401382 1.016966838081617 0.866865925883765 1.040257105853749 0.9612580533645977 1.081175644102 1.0337156205621911 0.9619488292440822 1.1415730026485493 0.8597908086281136 1.0 11.0223350065506 -5.209726947010036 0.47376867170187276 1.0605279121122189 0.7127582002384292 0.11481037099584634 0.08934662402874505 3.2518246237696573 0.46414782281497635 0.014745620941814813 0.6363719151335198 6.1698279414125095e-06 5.209726947010036 -0.3477697118737897 SISS(ph)PNVNR ddPTM_A549_PD325901_60min_R1 2 SISSPNVNR 9 0 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 S(0.014)IS(0.386)S(0.6)PNVNR;S(0.008)IS(0.04)S(0.951)PNVNR 132.57 4.7746999999999995e-05 31059000.0 6686.200000000001 6121.700000000001 6485.5 6524.2 7648.7 7778.5 6820.2 6372.4 7391.4 7443.0 7812.4 True False 7364.978101879708 6637.597143108016 6925.645030479691 6927.1850164667485 7111.481698582532 7715.154474953455 7079.746443156639 6245.297482948907 7080.76516228588 6973.047709769677 6851.524326883933 1.0749400790975945 0.968776702297252 1.0108181333174173 1.0110428987730422 1.0379415381594108 1.1260493441847415 1.033309684879496 0.9115194203490864 1.0334583699137512 1.0177366929004268 1.0 12.742209279185738 -4.575111023042411 5.534294869797133 1.016219924893964 14.279569016299016 0.10830035458396703 0.04923518997160883 9467.369587679184 842.3257457743969 0.006648501131305138 1582182.571615775 2.660044958972236e-05 4.575111023042411 13.263349091405052 SISS(ph)PSVSSETMDKPVDLSTR ddPTM_A549_MK2206_60min_R1 2 SISSPSVSSETMDKPVDLSTR 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.016)IS(0.084)S(0.681)PS(0.192)VS(0.005)S(0.02)ET(0.002)MDKPVDLSTR;S(0.008)IS(0.169)S(0.68)PS(0.138)VS(0.002)S(0.002)ET(0.001)MDKPVDLSTR 96.12799999999999 2.5532e-07 29311000.0 5697.4 6284.4 5891.6 5025.9 6893.1 5793.1 5323.3 4880.6 7379.799999999999 8091.0 8390.0 True False 6658.981831943599 6604.249117157323 6727.117471325255 6257.245725621223 5879.134121234358 6406.121996851443 6290.474704088701 5572.439996210639 5708.287083118985 6263.237480556454 6306.53144777986 1.0558865657108258 1.0472078307771335 1.0666905456712592 0.9921849716334978 0.9322294148400763 1.0157916518606505 0.9974539501112277 0.8835982254829396 0.9051389230967078 0.9931350588541586 1.0 12.622631034887931 -6.436601979064365 3.5705025042482883 0.9553620888599553 1.0553346582639205 0.5199938694558468 0.03973980217320248 0.16435848474169554 3.9363005981080756 0.006683518833763406 0.01624915658231825 3.659300044416533e-07 6.436601979064365 0.09997256940396515 SISS(ph)PSVSSETMDKPVDLSTR ddPTM_A549_PD325901_60min_R1 2 SISSPSVSSETMDKPVDLSTR 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.001)IS(0.208)S(0.764)PS(0.026)VSSETMDKPVDLSTR;S(0.001)IS(0.144)S(0.698)PS(0.144)VS(0.005)S(0.005)ET(0.001)MDKPVDLSTR 151.45 7.8525e-23 49704000.0 8489.4 8898.8 8369.5 9664.099999999999 10777.7 9540.4 8770.0 10459.3 9907.5 10558.3 10131.5 True False 9351.237638434028 9648.73310634132 8937.504599892036 10261.02950823645 10020.711533046524 9462.706145509539 9103.747149128143 10250.681056337882 9491.122229259327 9891.647136109246 8885.389728870077 1.0524285286046975 1.0859099488895818 1.0058652318707675 1.1548204210893187 1.127774001908729 1.064973674116248 1.024574883817261 1.1536557617761831 1.0681717424753048 1.1132485392249791 1.0 13.117219341453701 -10.182486804601831 0.7960680664821531 1.0029027725724846 1.0830050272712457 0.0 0.05625122966160439 0.5537747817424965 0.683760198796247 0.023561862778306488 0.009106900908526021 6.569210757523686e-11 10.182486804601831 0.08010225469876109 SISS(ph)PSVSSETMDKPVDLSTRK ddPTM_A549_MK2206_60min_R1 1 SISSPSVSSETMDKPVDLSTRK 22 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.015)IS(0.117)S(0.852)PS(0.013)VS(0.002)SETMDKPVDLSTRK 95.71 1.6897e-07 5733300.0 1462.9 1690.4 1609.4 1317.0 1579.6 1289.7 1230.8 1348.7 2173.1 1795.7 2577.6 True False 1709.8017555288875 1776.4341397178316 1837.6371203664307 1639.6650591223765 1347.2429324834668 1426.1751979664261 1454.4204282667479 1539.8823552205233 1680.8963197276184 1390.0501228321866 1937.5107818590432 0.8824734146193144 0.916864131209294 0.9484525905983431 0.8462740308206783 0.6953473214692443 0.7360863285612325 0.750664430817376 0.7947735670110723 0.8675545630330878 0.7174412322487478 1.0 10.919988623379952 -9.927870345677558 0.8809510210370441 0.9852476099650456 0.823064265222909 0.0 0.10918236372335155 0.4141160806096253 0.6568615764247014 0.03320307579562974 0.017109370594362454 1.1806730613082264e-10 9.927870345677558 -0.16218334474213658 SISS(ph)PSVSSETMDKPVDLSTRK ddPTM_A549_PD325901_60min_R1 1 SISSPSVSSETMDKPVDLSTRK 22 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.007)IS(0.11)S(0.764)PS(0.047)VS(0.053)S(0.017)ET(0.002)MDKPVDLSTRK 62.582 0.00049899 16139000.0 2998.0 3421.7 3895.0 3930.9 3501.9 4407.8 3663.2 4298.1 3928.3 4544.3 3975.9 True False 3302.354752989048 3710.058667457196 4159.338122537721 4173.702765278368 3255.9386248991545 4371.904338201435 3802.6050805799546 4212.3710237057785 3763.207212031229 4257.372122464908 3486.889505306671 0.9470775451769318 1.0640023613627234 1.192850566732228 1.1969701818559038 0.9337659309088993 1.2538121244013805 1.0905436133817257 1.2080597957850407 1.0792447556207423 1.220965595837105 1.0 11.76772493249571 -9.822346778144874 1.0651001746654416 1.0127683505179053 1.112065999794402 0.0 0.1165389749881752 0.6059866642183527 1.4043682157061443 0.029639244680213946 0.018203440673019135 1.5054045414188104e-10 9.822346778144874 0.09929764927649676 SISS(ph)SNPDLAVAPGSVDDEVSR ddPTM_A549_PD325901_60min_R1 1 SISSSNPDLAVAPGSVDDEVSR 22 0 Q96HP0;K7EP20;K7ESB7;K7EKT0 Q96HP0;K7ESB7 DOCK6 Dedicator of cytokinesis protein 6 1 SIS(0.001)S(0.5)S(0.5)NPDLAVAPGSVDDEVSR 331.46 7.502899999999997e-218 20504000.0 2558.5 2192.9 3165.6 2920.8 3752.5 3655.4 3440.0 3267.9 3822.1 3350.8 3170.2 True False 2818.2370365318466 2377.7033789832194 3380.436652299207 3101.2111823819105 3488.9373454222214 3625.6316343440053 3570.9110824402273 3202.719170882045 3661.470428710783 3139.2299161488936 2780.285497553564 1.013650230888762 0.8552011586851115 1.2158595422210163 1.1154290396114848 1.254884560773423 1.3040501191457787 1.2843684886254858 1.1519389550821995 1.31694044799809 1.1291034388055374 1.0 11.441017320400958 -5.767648099063364 24.92691302284432 1.1799198650811493 0.9344256752250357 0.5133150669274988 0.09744575159247433 103.768817873861 416621.6402869578 0.017853993542582335 0.057589564834786125 1.7074653568202824e-06 5.767648099063364 -0.2454941898561136 SISSENSSKGSPS(ph)SPAGSTPAIPK ddPTM_A549_PD325901_60min_R1 1 SISSENSSKGSPSSPAGSTPAIPK 24 1 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 S(0.113)IS(0.105)S(0.098)ENS(0.091)S(0.079)KGS(0.15)PS(0.181)S(0.181)PAGS(0.002)TPAIPK 64.733 8.7654e-05 2464400.0 821.11 898.68 882.97 1013.6 922.11 1200.0 866.43 1146.2 1162.7 1085.2 970.12 True False 904.4684827307669 974.4149175177339 942.8936539299444 1076.2077699473798 857.3441747068041 1190.2275978587325 899.4024677786882 1123.3381418234956 1113.8357623981656 1016.6802867986098 850.8013900973634 1.0630782850827993 1.1452906975225141 1.1082417881593285 1.264934193189578 1.0076901432997094 1.3989488166239668 1.0571238813746684 1.3203294621967459 1.3091607223052388 1.19496782519627 1.0 9.732678580248832 -4.950476966384627 1.1178524274273702 1.1690825300565666 0.948362184204906 0.06642253969533696 0.12626894787451057 8.875465062706438 5.618900169613925 0.02111003289387571 2.711857421904226 1.120786867575849e-05 4.950476966384627 -0.22072034585166056 SISSS(ph)NPDLAVAPGSVDDEVSR ddPTM_A549_MK2206_60min_R1 1 SISSSNPDLAVAPGSVDDEVSR 22 0 Q96HP0;K7EP20;K7ESB7;K7EKT0 Q96HP0;K7ESB7 DOCK6 Dedicator of cytokinesis protein 6 1 SIS(0.001)S(0.016)S(0.982)NPDLAVAPGSVDDEVSR 307.04 4.8543999999999974e-175 12325000.0 891.04 941.83 757.32 1078.0 1353.0 1173.9 999.2 1210.3 1747.9 1629.2 1553.0 True False 1041.4257681635515 989.7651241188146 864.7193637354943 1342.1100483932591 1153.9754923082614 1298.121318828246 1180.7417061457056 1381.8637313882994 1352.0034408227434 1261.1625884714595 1167.3472393804677 0.8921302360009478 0.8478754998761986 0.7407559075519093 1.1497093607772964 0.988545184653623 1.112026717531951 1.0114742780154657 1.1837640804476304 1.1581844674942445 1.0803662748547564 1.0 10.189018053948047 -6.264011374917751 24.99929792842663 1.0799944573122768 0.829016039391495 0.7282170448182625 0.07029434000593672 98.56107054883674 958000.825475852 0.011100918018833929 0.026931605368911815 5.444883915703152e-07 6.264011374917751 -0.2509784179207818 SISSS(ph)NPDLAVAPGSVDDEVSR ddPTM_A549_PD325901_60min_R1 1 SISSSNPDLAVAPGSVDDEVSR 22 0 Q96HP0;K7EP20;K7ESB7;K7EKT0 Q96HP0;K7ESB7 DOCK6 Dedicator of cytokinesis protein 6 1 SISS(0.025)S(0.975)NPDLAVAPGSVDDEVSR 377.73 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SIT(ph)SPTTLYDR ddPTM_A549_MK2206_60min_R1 2 SITSPTTLYDR 11 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 S(0.033)IT(0.873)S(0.093)PT(0.001)TLYDR;S(0.002)IT(0.829)S(0.058)PT(0.11)TLYDR 199.8 5.6147e-24 36870000.0 8199.5 8666.7 7580.6 8081.0 11888.1 8703.1 8132.2 8865.3 13093.6 13910.0 14567.2 True False 9583.375141471815 9107.798011531308 8655.643068627918 10060.845362769875 10139.37623807085 9624.056265349775 9609.715475098188 10121.983423842588 10127.920506182654 10767.721339085432 10949.762205732868 0.8752130832991363 0.831780438735265 0.790486853138798 0.9188186166730095 0.9259905418550797 0.8789283351113318 0.8776186454594344 0.9244021224993464 0.9249443335746662 0.9833749022830718 1.0 13.41861191893434 SIT(ph)SPTTLYDR ddPTM_A549_PD325901_60min_R1 2 SITSPTTLYDR 11 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 S(0.001)IT(0.499)S(0.499)PTTLYDR;S(0.003)IT(0.44)S(0.44)PT(0.041)T(0.077)LYDR 160.67 2.2616e-13 74655000.0 7077.4 7501.5 7731.200000000001 7315.7 8480.1 7220.1 8737.8 8221.8 8670.0 8184.400000000001 9042.599999999999 True False 7795.892437893495 8133.677731516543 8255.885723482323 7767.574173839822 7884.487030756822 7161.301899416528 9070.321760507624 8057.80974912267 8305.630050737158 7667.635587241562 7930.417525764255 0.983036821525006 1.0256304545242338 1.041040487043802 0.9794659800199184 0.9942083131363242 0.9030170071312094 1.143738237115519 1.0160637473303953 1.0473130858184851 0.9668640474894329 1.0 12.953181108534906 -7.735856323076448 24.999998588129625 1.030616104007855 0.9917974509540686 0.16338992094821725 0.05220155401907872 369.94726605446357 361515.1953650336 0.007443831704853367 0.011038710775626294 1.837146022797439e-08 7.735856323076448 -0.0388186530537864 SITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEK ddPTM_A549_PD325901_60min_R1 1 SITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEK 37 0 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;E9PRD6 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 0 24.183000000000003 0.053895000000000005 34582000.0 2190.1 2135.1 2174.4 3612.1 4496.5 6257.6 2655.2 2910.3 6751.6 3358.5 2838.6 False True 2412.4373397335926 2315.0323701341013 2321.967859729403 3835.2112133256987 4180.681352082883 6206.640180300666 2756.24508898119 2852.251783413817 6467.853731321448 3146.4437368348053 2489.470195367973 0.9690565262529709 0.9299297394447867 0.9327156694021753 1.5405732595078567 1.6793458141662665 2.493157054801876 1.1071613125192625 1.1457264235261193 2.5980844210771616 1.2639009467513325 1.0 11.281623027821736 -6.35422144610468 3.05664976770961 1.7247172238807593 0.9321399386761314 0.23447212381871108 0.5057940181826276 0.3098468398159352 5.5546786862321005 0.09152793067782898 0.2384066507346402 4.4236275474157733e-07 6.35422144610468 -0.7925772852046279 SITS(ph)TPLSGK ddPTM_A549_MK2206_60min_R1 1 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 SIT(0.02)S(0.687)T(0.292)PLSGK 189.56 2.3613e-14 34046000.0 6721.9 8430.9 8465.2 7791.1 13112.0 10612.0 10396.0 10608.0 15925.0 15404.0 15000.0 True False 7856.392385323425 8859.996798714537 9665.69265025843 9699.919849755768 11183.242169361367 11734.954796324511 12284.818631996342 12111.716485637511 12318.012926999365 11924.225701457368 11275.08602106053 0.6967922347242949 0.7858030335347428 0.8572611004655802 0.8602967491012896 0.9918542659871854 1.0407862764332796 1.0895543155102987 1.0742016923874687 1.0924983546902234 1.0575729248703134 1.0 13.46085081983135 -6.375780516181729 0.9441784458209264 1.0524395739587606 0.719796561925278 0.9277784797044655 0.034959426799141 0.16358098148890743 0.24519424141602117 0.007133326657380282 0.03715084173679823 4.209393090163828e-07 6.375780516181729 -0.3326430120334827 SITS(ph)TPLSGK ddPTM_A549_PD325901_60min_R1 1 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 S(0.318)IT(0.046)S(0.627)T(0.009)PLSGK 136.02 5.7872e-07 9482500.0 2928.5 2768.7 2699.5 3096.2 3817.2 3631.3 3326.4 5685.6 6043.4 6079.3 6222.1 True False 3225.7991641522453 3002.028065753496 2882.704303412215 3287.445242019608 3549.0930406251014 3601.7278967536786 3452.9879722759256 5572.196247733085 5789.416914489609 5695.451960500169 5456.821145141642 0.5911498798204634 0.5501422872227146 0.528275387214911 0.602446947513849 0.65039570589279 0.6600414052346935 0.6327837912280149 1.0211432809547305 1.060950461908411 1.0437307379170722 1.0 12.413845042822736 -8.245502093979068 4.512008665750903 1.0301140308478016 0.5986220749013105 0.9669833124799502 0.03819719845853366 0.029114565010793236 1.5502127614182397 0.007513575977467403 0.009531723079570202 5.681956519610393e-09 8.245502093979068 -0.43149195594649115 down SITST(ph)PLSGK ddPTM_A549_MK2206_60min_R1 1 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 SIT(0.001)S(0.065)T(0.933)PLSGK 194.48 3.7512e-19 28847000.0 5559.3 6716.2 7591.4 6759.0 10412.0 8611.4 9671.2 9055.8 13126.0 12439.0 12120.0 True False 6497.573928164434 7058.025892790399 8667.974671026297 8414.955303423041 8880.408592692998 9522.652632215311 11428.331853959513 10339.487382224379 10152.98195791482 9629.021260739304 9110.269505016913 0.7132142385673991 0.7747329416438922 0.9514509605070355 0.9236779766821419 0.9747690326617304 1.0452657440014594 1.2544449807622124 1.1349266206154 1.1144546220420481 1.056941428070456 1.0 13.153278017921059 -5.876404843621742 0.8078623580109018 1.0748207374632983 0.6480491678849776 0.7645486207348631 0.07209984000457509 0.538494591126481 0.4175407946774428 0.013595129769304238 0.16938550988576961 1.3292147636985165e-06 5.876404843621742 -0.42677156957832074 SITST(ph)PLSGK ddPTM_A549_PD325901_60min_R1 2 SITSTPLSGK 10 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 SIT(0.007)S(0.077)T(0.915)PLS(0.001)GK;SIT(0.019)S(0.142)T(0.647)PLS(0.192)GK 163.83 5.3174999999999995e-09 58869000.0 13972.6 14566.5 14275.3 14176.5 17229.9 15993.9 19797.1 27038.0 31464.0 32541.0 34759.0 True False 15391.088065915532 15794.070076136204 15244.107702352436 15052.150207832505 16019.73126392813 15863.650981160645 20550.4894738888 26498.705879099318 30141.677499007375 30486.355706518207 30483.863355455273 0.5048929621042014 0.5181124810845131 0.500071382836205 0.49377436292499427 0.525515125072272 0.5203950298616513 0.6741432092862063 0.8692699337388026 0.9887748526996772 1.000081759684915 1.0 14.895758133120687 -8.207725654830444 1.5484639443634585 0.9971985180049782 0.5053350395664924 0.9967199499631371 0.012309028346869536 0.012469839758891649 0.058416793415921896 0.0020800702465507658 0.0027508346083854377 6.198325015424227e-09 8.207725654830444 -0.49186347843848577 down SIVECQPDASATPGVGTADS(ph)PAAPTDSRDDQK ddPTM_A549_PD325901_60min_R1 2 SIVECQPDASATPGVGTADSPAAPTDSRDDQK 32 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SIVECQPDAS(0.001)AT(0.006)PGVGT(0.162)ADS(0.829)PAAPT(0.001)DSRDDQK;SIVECQPDASAT(0.001)PGVGT(0.183)ADS(0.807)PAAPT(0.007)DS(0.001)RDDQK 109.38 4.4325e-15 23089000.0 2497.2 2935.7 2416.54 2384.2 2465.4 2574.31 2379.1 3130.6 2583.2 2741.7 3432.7 True False 2750.7139056585243 3183.1017418400465 2580.5409362355094 2531.4666190889334 2292.238809168273 2553.345672869759 2469.6379523934734 3068.15772709181 2474.637087319979 2568.588594098551 3010.4996616781623 0.9137067645857752 1.0573333664039244 0.8571802777738968 0.840879223908566 0.7614147373431344 0.8481468061173708 0.8203415478933511 1.0191523241631946 0.8220021144066584 0.8532100590460542 1.0 11.55578723995281 -10.990265142617773 1.1940350365725028 1.001754895897292 0.8768814081645341 0.0 0.0935212718966534 0.6262739152305207 1.5508773548291501 0.06572387987950885 0.014170625143613004 1.022668448822213e-11 10.990265142617773 -0.12487348773275786 SIVKNS(ph)ASK ddPTM_A549_MK2206_60min_R1 1 SIVKNSASK 9 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 S(0.014)IVKNS(0.493)AS(0.493)K 52.693000000000005 0.006529699999999999 9894300.0 5758.3 6932.7 6599.4 5869.9 8480.4 6874.4 5893.0 5601.4 8692.6 9546.6 8754.3 True False 6730.160263081548 7285.5448180441335 7535.29415443409 7308.025763509823 7232.9443939179455 7601.844445142595 6963.681819772458 6395.415603568057 6723.739979229804 7390.016429598353 6580.365703611351 1.0227638654471725 1.107164122207642 1.1451178390129089 1.1105804893942486 1.099170581043612 1.1552313028697856 1.058251491395188 0.9718936441569209 1.0217881926440302 1.1230403844489465 1.0 12.683952048580904 -8.001613729295123 6.712144534514253 1.0079479046235769 1.1083358725029986 0.33285293183142983 0.04840577611687532 0.06123747374675845 14.570540859248105 0.005159397657997254 0.0069576362582042086 9.962911458338174e-09 8.001613729295123 0.10038796787942172 SIVKNSAS(ph)K ddPTM_A549_MK2206_60min_R1 1 SIVKNSASK 9 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 SIVKNS(0.397)AS(0.603)K 60.49 0.0022481 10120000.0 5597.2 6590.5 5597.4 5041.7 7921.7 6750.1 5605.7 4997.6 7696.6 8195.0 8473.1 True False 6541.870521598396 6925.928299698511 6391.195487473005 6276.916726330516 6756.4284238125365 7464.391101646255 6624.183128643897 5706.025104508107 5953.3323889446365 6343.743808325321 6368.995424336534 1.0271432283655426 1.087444383023716 1.0034856459547206 0.9855426653857882 1.0608311003012476 1.171988768138239 1.0400671828609371 0.8959066107513354 0.9347364839039436 0.9960352277982923 1.0 12.63685012015466 -8.07128425276995 9.704700476012857 0.9630017929841477 1.056570817561523 0.4387474737426581 0.05290086503574858 0.403903745695258 53.3115158278435 0.009077285383251631 0.011729473351172066 8.486248545177007e-09 8.07128425276995 0.09356902457737526 SIVKNSAS(ph)K ddPTM_A549_PD325901_60min_R1 2 SIVKNSASK 9 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 SIVKNS(0.209)AS(0.791)K;SIVKNS(0.403)AS(0.597)K 72.29 0.00075765 38320000.0 14144.5 15199.3 14955.2 16313.4 17642.7 18876.2 15995.7 18014.5 17908.2 17697.1 18388.7 True False 15580.439227369438 16480.198352947984 15970.149804923278 17321.041667580477 16403.53761601083 18722.47848558417 16604.425116682898 17655.186665398145 17155.580631443037 16579.702085794026 16127.006475573526 0.9661085738985759 1.0219006470859557 0.9902736648064333 1.0740394811532739 1.017147084355435 1.1609394783800595 1.0296036739262482 1.0947590733679713 1.0637796082879623 1.0280706534660458 1.0 13.97719104720317 -6.2434753780476715 23.301170392456104 1.0460705114579516 0.9956749148153592 0.27257674245850994 0.04452442880227374 462.52113898952007 599934.1678064411 0.006622670163316582 0.017474878048344678 5.708534392994898e-07 6.2434753780476715 -0.05039559664259241 SIYDDIS(ph)SPGLGST(ph)PLTSR ddPTM_A549_PD325901_60min_R1 1 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 2 SIYDDIS(0.5)S(0.5)PGLGS(0.189)T(0.749)PLT(0.053)S(0.009)R 124.29 2.4209000000000002e-14 5049100.0 1360.7 1644.6 1764.5 1558.3 1330.3 1446.5 1584.4 1366.1 1328.2 1833.1 1849.0 True False 1498.8372623056034 1783.1962137242017 1884.249580800464 1654.552651843923 1236.8643172858576 1434.7201835855471 1644.695209016947 1338.8520638152818 1272.3803729399174 1717.357753161197 1621.5847217767134 0.9243040108711558 1.0996626878492146 1.1619803489119938 1.0203306861642651 0.7627503519709219 0.8847642459368849 1.0142517914296283 0.8256442268081735 0.7846524180036766 1.0590613799564839 1.0 10.66318868588047 -6.543898975302106 19.837570277152906 0.8906240577441384 1.0699845811592696 0.3173576126309201 0.103582761631603 17.333754401902183 16358.28747005069 0.015020576288088493 0.031278160027495235 2.8582553475870653e-07 6.543898975302106 0.1793605234151312 SIYDDIS(ph)SPGLGSTPLTSR ddPTM_A549_MK2206_60min_R1 1 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 S(0.001)IY(0.002)DDIS(0.453)S(0.453)PGLGS(0.021)T(0.021)PLT(0.025)S(0.025)R 43.382 0.060992 1195800.0 908.64 1385.3 897.55 783.27 1486.6 876.63 901.69 1107.0 1645.2 1120.3 1706.6 True False 1061.9962178848648 1455.8058529052946 1024.8360863582018 975.171185162326 1267.9231092871114 969.3944047401009 1065.5154013355889 1263.920640045317 1272.564826844544 867.2234519178587 1282.8041202361267 0.8278709127387137 1.1348621585634784 0.7989030204935416 0.7601871320641108 0.9883996233608323 0.7556838877019383 0.8306142648960768 0.9852795295143473 0.9920180382725168 0.6760373140664907 1.0 10.325085177351198 -8.324387511487659 7.210167707576764 0.9955537489519696 0.8742173498365531 0.0 0.1414068123324202 0.29198829366805773 29.306953171218314 0.016444011723103998 0.019915861424284607 4.738190182173935e-09 8.324387511487659 -0.1213363991154165 SIYGEKFEDENFILK ddPTM_A549_MK2206_60min_R1 2 SIYGEKFEDENFILK 15 1 P62937;P62937-2;F8WE65;C9J5S7 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 186.43 2.1836e-33 41892000.0 8548.6 8928.6 8720.7 7332.799999999999 11073.7 9069.4 8453.6 7071.6 12655.7 12164.3 11700.400000000001 False True 9991.394686796264 9383.027602865963 9957.426392183135 9129.336329181902 9444.773399241683 10029.11788821951 9989.509694829192 8074.0209558667275 9789.204157000058 9416.376181526746 8794.86776538778 1.1360483128714474 1.0668753474376143 1.1321860268747423 1.038029970741621 1.07389600971735 1.1403375418205972 1.1358339842405507 0.9180377887706342 1.113058708571548 1.070667170072177 1.0 13.102446170983148 -14.999999994760769 0.2760493552932027 0.3646200434943934 1.0935676229991653 0.04980082473017888 0.06447928782996441 51.917221681844715 0.682021908565998 18.276791013884473 0.025385057115933272 1.000000012063776e-15 14.999999994760769 0.728947579504772 SIYGEKFEDENFILK ddPTM_A549_PD325901_60min_R1 2 SIYGEKFEDENFILK 15 1 P62937;P62937-2;F8WE65;C9J5S7 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 203.9 7.036399999999998e-39 81045000.0 14420.3 14413.3 15856.7 16483.0 19338.1 19437.8 18217.5 18467.6 17175.3 17528.6 18438.7 False True 15884.238240336217 15627.95937448074 16932.831016083168 17501.117474390943 17979.858568823314 19279.50500138204 18910.776931498513 18099.249230448062 16453.481869714633 16421.841204550405 16170.856792549646 0.9822756112498948 0.9664274178521552 1.0471202134375825 1.0822628447525542 1.1118680227943842 1.192237693321521 1.1694356813679299 1.1192510986051696 1.0174774336815102 1.0155207862651034 1.0 13.981108499772002 -4.142010887819522 16.109791335586053 1.0443504783457882 1.0601598522051545 0.0 0.07542380028104202 0.0 0.0 0.011435116987147213 0.0 7.210894011505948e-05 4.142010887819522 0.015809373859366316 SIYYITGESK ddPTM_A549_MK2206_60min_R1 2 SIYYITGESK 10 0 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 175.73 2.5963e-10 15634300.0 10705.099999999999 11977.8 11582.2 10378.6 15842.0 12877.9 12509.5 11639.0 16895.7 15177.2 16175.400000000001 False True 12511.859165433247 12587.418858679732 13224.730120236161 12921.357465913052 13511.6627857705 14240.630830341823 14782.314224409232 13288.863892942592 13068.850926888745 11748.659978976812 12158.60176167084 1.029054114172571 1.0352686193210727 1.0876851121093725 1.0627338339714973 1.1112842620082428 1.1712391860085785 1.215790640582494 1.0929598775769453 1.0748646253130358 0.9662838054301325 1.0 13.569689708043962 -9.880855315431715 0.9389482944655578 1.009978041192486 1.1008268355076682 0.38400972699527147 0.05402663856307046 0.46697884383077615 0.8436453439765051 0.020835357948308708 0.011546303506865483 1.315663070407015e-10 9.880855315431715 0.09084879431518234 SIYYITGESK ddPTM_A549_PD325901_60min_R1 2 SIYYITGESK 10 0 P08238;Q58FF8 P08238 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 179.8 5.4598999999999995e-11 34949000.0 11894.5 12323.7 12358.1 13006.9 14617.099999999999 13773.5 12203.0 13228.0 15085.099999999999 13403.0 14308.3 False True 13102.020883731904 13362.261449028905 13196.794981292276 13810.306672186829 13590.445322257465 13661.333182589377 12667.391842737827 12964.157162834756 14451.12570684833 12556.732292629706 12548.469807786778 1.0441130340530944 1.0648518627137422 1.0516656758502292 1.1005570307558166 1.0830360618012647 1.0886851856719635 1.0094770148689567 1.0331265374516045 1.1516245349597036 1.0006584456088663 1.0 13.615223828561165 -11.207300216200043 1.6558670878219965 1.0000304986619013 1.0811171867731275 0.3025062603574199 0.037384076446387846 0.3781660473128202 1.8679119992013742 0.03279222070922472 0.006836922455275989 6.2043999232449066e-12 11.207300216200043 0.08108668811122621 SKAS(ph)LEK ddPTM_A549_MK2206_60min_R1 1 SKASLEK 7 1 P53985;Q5T8R3;Q5T8R5;P53985-2 P53985 SLC16A1 Monocarboxylate transporter 1 1 S(0.008)KAS(0.992)LEK 73.499 0.0053008000000000005 82647000.0 18569.0 18419.0 12631.0 8479.4 10544.0 8985.5 8148.6 10331.0 10692.0 21104.0 21625.0 True False 21702.9932315373 19356.448426090104 14422.26573092357 10556.85338065473 8992.991567552337 9936.339645907825 9629.095142813141 11795.450887360585 8270.279071615523 16336.591742635437 16254.915680362283 1.3351649223106639 1.1908058341683565 0.8872556471238571 0.6494560530639087 0.553247506439966 0.6112821402027948 0.5923805039755538 0.7256543878360919 0.5087863409594259 1.0050246992281744 1.0 13.988588451859558 -5.7910575714858945 2.343600744752921 0.7153038979956391 1.3170842335832897 0.6547744118559735 0.15598573417388928 0.17363475718247362 1.8335220392810756 0.02716764826059902 0.1366138833509255 1.6178655539189224e-06 5.7910575714858945 0.6017803355876506 SKAS(ph)LEK ddPTM_A549_PD325901_60min_R1 2 SKASLEK 7 1 P53985;Q5T8R3;Q5T8R5;P53985-2 P53985 SLC16A1 Monocarboxylate transporter 1 1 SKAS(1)LEK;S(0.008)KAS(0.992)LEK 92.538 0.010187 46949000.0 12384.9 10973.1 9861.900000000001 10070.6 13098.0 9285.3 9737.400000000001 9940.3 11019.400000000001 11075.0 14197.2 True False 13642.205930718505 11897.841647097806 10531.187838422284 10692.638090007966 12178.041665646973 9209.683595331406 10107.962085509742 9742.032918485509 10556.29293899574 10375.722609928676 12451.03440346585 1.095668479312938 0.9555705382828227 0.8458082675838434 0.8587750819346849 0.9780746941199611 0.7396721667372321 0.8118170553521324 0.782427596198251 0.8478245740014426 0.8333221380418406 1.0 13.60397798262667 -5.350562445204294 2.999383027465006 0.891437874942027 1.11038038168345 0.39400897861684636 0.07942347886736992 0.3078792448858171 4.288453925575654 0.012985266573516991 0.14205624996769628 4.461054765164596e-06 5.350562445204294 0.21894250674142313 SKDDS(ph)DKENVCLLPDESIQK ddPTM_A549_PD325901_60min_R1 1 SKDDSDKENVCLLPDESIQK 20 2 H3BPM0;H3BS25;Q9BY12-2;Q9BY12;H3BT27;Q9BY12-3 H3BPM0 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum 1 S(0.178)KDDS(0.822)DKENVCLLPDESIQK 77.693 5.9483999999999995e-05 3280300.0 1833.9 2072.4 1932.2 2161.7 1877.8 1956.2 2233.1 2294.4 1905.9 2199.4 2151.8 True False 2020.0761779541751 2247.0484210884333 2063.3307112624875 2295.2232994230953 1745.9098060583206 1940.269355776043 2318.081842499209 2248.6363920780195 1825.8016509457827 2060.529508648047 1887.1422413840633 1.070441927298822 1.190714918998585 1.0933625807396503 1.2162428719415121 0.9251606835835754 1.0281521515585468 1.2283556542081784 1.191556387624936 0.9674955130073861 1.0918782185368383 1.0 10.881987453337288 -8.777560116426917 24.930462445632386 0.984650643790747 1.1171316816540577 0.15753382011940065 0.09179529091900851 196.96089672904128 304595.78689615574 0.015035451667158901 0.016030583940038617 1.6689367716718093e-09 8.777560116426917 0.13248103786331078 SKDET(ph)RVSTNGSDDPEDAGAGENRR ddPTM_A549_MK2206_60min_R1 1 SKDETRVSTNGSDDPEDAGAGENRR 25 3 A0A590UK95;A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 A0A590UK95 ITCH E3 ubiquitin-protein ligase Itchy homolog 1 S(0.016)KDET(0.467)RVS(0.377)T(0.07)NGS(0.07)DDPEDAGAGENRR 83.088 9.189299999999999e-07 6739200.0 546.27 821.19 657.1 709.78 897.33 691.78 743.23 753.51 1096.5 1220.6 1141.4 True False 638.4670209807683 862.9850634139173 750.2866607386486 883.6761318632349 765.3339456858629 764.9837004336009 878.2652704750531 860.3223500275944 848.1445007506936 944.8656122564836 857.958878962566 0.7441697226244635 1.005858304604795 0.8745018894680437 1.0299749248259613 0.8920403581711234 0.8916321273562788 1.0236682573144313 1.0027547603072613 0.9885607825123975 1.1012947536588282 1.0 9.744764692349833 -4.71924480701464 1.7850292247613957 0.9806045181261732 9.017252709749199e-17 0.49810885949600725 0.06701962996704351 3.0633440595751287 2.455453385989299 0.007641405076268984 8.272431976471125 1.9087769986924737e-05 4.71924480701464 -0.9806045181261731 SKDETRVS(ph)TNGSDDPEDAGAGENRR ddPTM_A549_MK2206_60min_R1 2 SKDETRVSTNGSDDPEDAGAGENRR 25 3 A0A590UK95;A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 A0A590UK95 ITCH E3 ubiquitin-protein ligase Itchy homolog 1 S(0.162)KDET(0.124)RVS(0.466)T(0.124)NGS(0.124)DDPEDAGAGENRR;S(0.164)KDET(0.164)RVS(0.592)T(0.04)NGS(0.04)DDPEDAGAGENRR 59.65 0.00018239 9614200.0 1049.4 1038.5 1098.8200000000002 897.6099999999999 1431.71 976.23 1036.0500000000002 761.4000000000001 1321.73 1416.83 1089.47 True False 1226.5130646332739 1091.3552142078597 1254.6491988325101 1117.5244902952445 1221.1073555747682 1079.5340106309718 1224.28687415158 869.3307816897062 1022.360265369097 1096.76711896883 818.9245311576551 1.4977119599768736 1.3326688512616527 1.5320693801404413 1.36462451395305 1.4911109743514168 1.3182338171075565 1.4949935281837181 1.0615517652900144 1.2484181709929476 1.3392774025445404 1.0 9.677586694704079 -9.194839091858833 0.30714840854786185 0.9549534806415397 1.4890744892702446 0.29791859691205735 0.1408792346543008 0.5809837449225553 0.15501725541046119 0.11522471188411784 0.07148829856623835 6.38500009617659e-10 9.194839091858833 0.5341210086287048 SKDETRVS(ph)TNGSDDPEDAGAGENRR ddPTM_A549_PD325901_60min_R1 1 SKDETRVSTNGSDDPEDAGAGENRR 25 3 A0A590UK95;A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 A0A590UK95 ITCH E3 ubiquitin-protein ligase Itchy homolog 1 S(0.067)KDET(0.155)RVS(0.594)T(0.092)NGS(0.092)DDPEDAGAGENRR 43.416000000000004 0.015465000000000001 9207800.0 1319.1 1663.8 1480.4 1234.1 1675.1 1616.6 1546.4 1556.4 1944.6 1508.4 1859.4 True False 1453.0140609299046 1804.014265106608 1580.8688463683814 1310.3275541555458 1557.4467547812815 1603.4349455820225 1605.2490982225495 1525.3563810278206 1862.875224528658 1413.1593665748462 1630.7055877077462 0.8910339621589085 1.106278336632475 0.9694385413804711 0.8035341045206388 0.9550753775060995 0.9832767837853198 0.98438927929291 0.9353965501350779 1.1423737298571894 0.866593808978909 1.0 10.671280621896285 -8.742787232237422 24.913752047803463 1.0672320447773427 0.9562420268588089 0.0 0.09659570317698754 229.65707900608933 306753.7066690146 0.01424548543319855 0.01613881920450618 1.808059706222451e-09 8.742787232237422 -0.1109900179185338 SKDHFGLEGDEESTMLEDSVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SKDHFGLEGDEESTMLEDSVSPK 23 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 SKDHFGLEGDEESTMLEDS(0.004)VS(0.996)PK;SKDHFGLEGDEESTMLEDS(0.028)VS(0.972)PK 160.99 1.9647e-33 19386900.0 4016.7 4508.7 4933.9 4057.1000000000004 5535.1 4129.5 4183.3 4433.8 6579.5 5937.5 7230.7 True False 4694.620761113463 4738.173571785248 5633.601210498278 5051.08968213014 4720.894122302635 4566.480949059747 4943.35146048772 5062.304727943025 5089.253755302501 4596.214626227162 5435.11763283216 0.8637569742289396 0.8717701974218828 1.0365187271140426 0.9293432126689946 0.8685909746984899 0.8401807021571713 0.9095206018405553 0.9314066538988839 0.936364969280447 0.8456513615202367 1.0 12.408095544655625 -9.758719326541781 0.6444632429488766 0.9961629556996491 0.9057858682721874 0.0 0.0665433065670903 0.6417880145780478 0.5629369036577491 0.02593370939967671 0.012387143550605233 1.742932922623475e-10 9.758719326541781 -0.09037708742746164 SKDHFGLEGDEESTMLEDSVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SKDHFGLEGDEESTMLEDSVSPK 23 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 SKDHFGLEGDEESTMLEDS(0.02)VS(0.98)PK;SKDHFGLEGDEESTMLEDS(0.023)VS(0.977)PK 150.95 5.591e-28 28965000.0 2676.8 3136.7 3231.3999999999996 3073.4 3819.5 2908.3 3199.3 3096.5 3868.0 4008.1 3830.3 True False 2948.54676544399 3401.040717249606 3450.702235986751 3263.236937802167 3551.2314965596743 2884.6157690437917 3321.0511122241346 3034.737878342741 3705.4414113323323 3755.0278819733753 3359.197382272225 0.8777533529302577 1.0124563490071183 1.02724009437416 0.9714335201091553 1.0571666658532444 0.8587217245009232 0.9886442308363889 0.9034115989605788 1.1030734397708721 1.117834844058316 1.0 11.713900853696538 -8.765303205545838 24.999973575517664 1.0486735658739204 0.9668715075935644 0.34257847003745423 0.06615942862589105 103.0908079543293 667023.2022360595 0.011321579361252209 0.012275940430048171 1.7167094367067739e-09 8.765303205545838 -0.08180205828035592 SKDHFGLEGDEESTMLEDSVS(ph)PKK ddPTM_A549_MK2206_60min_R1 1 SKDHFGLEGDEESTMLEDSVSPKK 24 2 Q9Y490 Q9Y490 TLN1 Talin-1 1 SKDHFGLEGDEESTMLEDS(0.221)VS(0.779)PKK 100.68 2.9206e-11 9206800.0 929.26 780.05 692.79 437.61 981.7 769.89 998.67 830.51 1132.1 1276.3 1133.6 True False 1086.0963697742668 819.7512131370648 791.0380394051565 544.8244696450591 837.2932304501263 851.3592487883786 1180.1154120061356 948.2373358302049 875.6811575922118 987.9829435711536 852.0958342316148 1.274617626494635 0.9620410993750286 0.928343981541093 0.639393420032806 0.9826280059274825 0.9991355603282577 1.3849562039818155 1.1128294468019393 1.0276791910171292 1.1594739744996831 1.0 9.734871887591401 -7.285707965115795 4.1992041856120785 1.0524952178371838 0.9373139149919776 0.11504460175675779 0.17467907357102452 0.4472501656264908 18.750133633578013 0.02655308539026846 0.044448303876887876 5.1795500603825544e-08 7.285707965115795 -0.11518130284520622 SKDHFGLEGDEESTMLEDSVS(ph)PKK ddPTM_A549_PD325901_60min_R1 2 SKDHFGLEGDEESTMLEDSVSPKK 24 2 Q9Y490 Q9Y490 TLN1 Talin-1 1 SKDHFGLEGDEESTMLEDS(0.076)VS(0.924)PKK;SKDHFGLEGDEESTMLEDS(0.085)VS(0.915)PKK 131.81 2.8649e-23 22218000.0 5197.299999999999 5395.2 5647.9 5721.3 7823.700000000001 6641.6 6641.900000000001 7065.9 6875.099999999999 6172.700000000001 7294.5 True False 5724.926069949959 5849.872438456044 6031.200457581722 6074.691706984948 7274.1903022997585 6587.513011615463 6894.661139087139 6924.965081408679 6586.163455804266 5782.954668560429 6397.322743645344 0.894894051677587 0.9144250920069493 0.9427694520450288 0.949567803659605 1.1370678944602932 1.0297296659229895 1.0777416452743167 1.082478617838604 1.0295187095799572 0.9039648147039031 1.0 12.64325255343613 -6.542132033641319 24.9476552071527 1.0331291936455085 0.9219189897672617 0.48619727864923823 0.05580461877121933 123.09947076036362 159507.04373203433 0.006344773869474532 0.013209115875077424 2.869907943716497e-07 6.542132033641319 -0.11121020387824676 SKDIVLVAYSALGSQR ddPTM_A549_MK2206_60min_R1 2 SKDIVLVAYSALGSQR 16 1 S4R3Z2;A0A0A0MSS8;P42330;P42330-2 S4R3Z2;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 0 ; 99.021 2.481e-06 7304900.0 2613.4 2586.8 3004.6 2751.4 4155.6 3112.3 2909.5 3133.3 5020.4 4005.3999999999996 3988.9 False True 3054.478028504477 2718.4570708838633 3430.6974598315996 3425.493123515039 3544.316744890033 3441.6415202224625 3438.1184888219855 3577.4548703288115 3883.2874159314006 3100.5773581288854 2998.3460419605567 1.0187209834216524 0.9066522118662195 1.1441966376864017 1.1424609019695338 1.1820906243938667 1.147846670150202 1.1466716785544442 1.193142759462676 1.2951431761332655 1.034095903120469 1.0 11.54995118035975 -5.773762818063823 24.14557869401441 1.1499003177692553 0.9626866248985542 0.4428342172933283 0.0776147915091059 111.24302986221966 217963.4992676412 0.014389361433250663 0.04524615527712307 1.683593273514477e-06 5.773762818063823 -0.1872136928707011 SKDPGS(ph)AER ddPTM_A549_MK2206_60min_R1 3 SKDPGSAER 9 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q5TH12;Q5TH08;Q5TH07 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 S(0.03)KDPGS(0.97)AER;S(0.001)KDPGS(0.999)AER;SKDPGS(1)AER 63.76 0.001835 44023000.0 13008.96 13170.64 10302.310000000001 6593.64 2908.87 1894.3200000000002 1888.03 1583.35 2950.85 18225.0 18810.33 True False 15204.554409464145 13840.969319648157 11763.33247267446 8209.082095999744 2480.9790763567876 2094.7756850521528 2231.06061194383 1807.7947113060102 2282.487186539155 14107.959842187785 14139.205922302368 1.0753471229583946 0.9789071179602957 0.8319655670421814 0.5805900374540278 0.17546806305744753 0.1481537008912201 0.15779249727346312 0.12785687691658124 0.16142965871505496 0.9977901106832813 1.0 13.787413478188597 -6.1429276015656 2.31333696442143 0.46328951570361043 1.0227626342484757 0.3839050809264287 0.3108346491286555 0.33723260468872146 3.4679033143259335 0.05591368319695505 0.18901510221198828 7.195689227038792e-07 6.1429276015656 0.5594731185448653 SKDPGS(ph)AER ddPTM_A549_PD325901_60min_R1 4 SKDPGSAER 9 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q5TH12;Q5TH08;Q5TH07 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 S(0.007)KDPGS(0.993)AER;S(0.001)KDPGS(0.999)AER;S(0.052)KDPGS(0.948)AER;SKDPGS(1)AER 82.20200000000001 0.00042717 139866000.0 15903.099999999999 16574.0 15687.2 15086.2 16357.400000000001 14853.1 11777.57 13467.599999999999 15581.2 18215.5 19789.4 True False 17517.571004756544 17970.74914645805 16751.827726796862 16018.040310753908 15208.512653966538 14732.141278129615 12225.771871283598 13198.978152872178 14926.376349082551 17065.370221323323 17355.4292553424 1.0093424223065088 1.0354540289417642 0.965221169717843 0.9229411773738289 0.8762971189136685 0.8488491446326356 0.70443500367588 0.7605100374460189 0.8600407474501313 0.9832871299377519 1.0 14.083099427625559 -6.134954797114662 2.02240139462164 0.8919692978338507 1.0229244588656836 0.3291154011809617 0.08341929036691464 0.4256020080892142 3.3166070057463792 0.014822633423336671 0.054193749985081 7.329008120434453e-07 6.134954797114662 0.1309551610318329 SKDVEFQDGWPRS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 SKDVEFQDGWPRSPGR 16 2 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 SKDVEFQDGWPRS(1)PGR;SKDVEFQDGWPRS(1)PGR 106.86 1.5773e-07 33584000.0 2552.7 3099.3 2389.4 2027.71 3342.3999999999996 2418.51 2276.5 2655.94 3994.3 4321.8 5154.700000000001 True False 2983.5333524769926 3257.0411318193756 2728.252849138529 2524.49904102736 2850.737387650507 2674.4351229229924 2690.1105825067025 3032.4276284751218 3089.597427586408 3345.5023783795446 3874.6457275173843 0.7700144896572628 0.8406035960108981 0.7041296265521061 0.6515431909293269 0.7357414298305591 0.6902399112077255 0.6942855609744601 0.7826335210311215 0.7973883665400338 0.8634343921097324 1.0 11.919848690398835 -10.031418692553281 0.5765486445720599 1.0047951255804946 0.7265008928009763 0.576889975941704 0.06165780496427025 0.2912449480355918 0.1875647537825905 0.037995174819691335 0.013075086975720199 9.30210649992943e-11 10.031418692553281 -0.27829423277951826 SKDVEFQDGWPRS(ph)PGR ddPTM_A549_PD325901_60min_R1 4 SKDVEFQDGWPRSPGR 16 2 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 SKDVEFQDGWPRS(1)PGR;SKDVEFQDGWPRS(1)PGR;SKDVEFQDGWPRS(1)PGR;SKDVEFQDGWPRS(1)PGR 113.36 4.6726e-08 56339000.0 8435.7 7504.200000000001 7209.57 7432.400000000001 6970.1 7249.8 6246.2 6735.6 9470.4 7606.200000000001 10041.6 True False 9292.086053965886 8136.605269992192 7698.8547748663095 7891.482467794888 6480.544221539623 7190.760032463525 6483.902559051786 6601.253174024021 9072.392022203134 7125.943233917788 8806.546858947018 1.0551338910467027 0.9239268694432485 0.8742194753718538 0.8960927130907763 0.7358780149969576 0.8165243593927018 0.7362593605533887 0.7495847441403747 1.030187219521353 0.8091642897100105 1.0 13.10436071855701 -8.779093732258342 24.99284220199138 1.0142550984593526 0.8448586346574058 0.05148467230020004 0.10872161752182372 172.81181861717516 244644.5468435606 0.016279836479769345 0.017349510134492034 1.6630536805774575e-09 8.779093732258342 -0.16939646380194673 SKDYDVYS(ph)DNDICSQESEDNFAK ddPTM_A549_MK2206_60min_R1 2 SKDYDVYSDNDICSQESEDNFAK 23 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 SKDYDVYS(1)DNDICSQESEDNFAK;SKDYDVYS(1)DNDICSQESEDNFAK 173.96 4.3893e-41 80914000.0 3172.1 3624.4 3145.3 2889.6000000000004 4044.1000000000004 3809.1000000000004 3705.2 3163.0 5346.2 4336.6 4679.4 True False 3707.47292960092 3808.8664789359377 3591.3508355216427 3597.5521297190735 3449.2182471868778 4212.176433724057 4378.386879114356 3611.3649362812466 4135.294236127095 3356.959048100499 3517.3758351300444 1.0540451471157182 1.082871622899836 1.0210313039774617 1.0227943496365282 0.9806226030035124 1.1975337954092484 1.2447878999408883 1.0267213700089934 1.175675966959671 0.9543930490943359 1.0 11.780283781271352 -7.234603616309476 24.990525192492434 1.1008501351316469 1.0339329163935533 0.13643214633962164 0.08459112097974124 1316.3822922444645 1225867.5422842936 0.013023994750352865 0.02255543107252045 5.8263475008521125e-08 7.234603616309476 -0.06691721873809353 SKDYDVYS(ph)DNDICSQESEDNFAK ddPTM_A549_PD325901_60min_R1 2 SKDYDVYSDNDICSQESEDNFAK 23 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 SKDYDVYS(1)DNDICSQESEDNFAK;SKDYDVYS(1)DNDICSQESEDNFAK 240.44 8.920399999999998e-99 158293000.0 5564.2 7533.5 8607.4 6697.900000000001 7411.5 6556.8 7262.7 7793.1 6178.1 7071.0 7620.9 True False 6129.073487852459 8168.374483820553 9191.549924500947 7111.614070965424 6890.941808286952 6503.403594700111 7539.0860228019355 7637.660506931323 5918.45594192148 6624.535853255591 6683.577612865421 0.9170348341664231 1.2221560004176508 1.375243987113706 1.0640430145190598 1.031025927644256 0.9730422793597119 1.1280015673476613 1.1427503276432909 0.8855221387014143 0.9911661443870752 1.0 12.706404845847008 -7.719608831544683 0.6525607048404752 0.9522314633666212 1.1560122724723416 0.13869918879766885 0.1264895465136706 0.726714554699646 0.6262157661916179 0.029445584891247073 0.059292036568195323 1.9071777370095792e-08 7.719608831544683 0.20378080910572038 SKEFVS(ph)SDESSSGENK ddPTM_A549_PD325901_60min_R1 1 SKEFVSSDESSSGENK 16 1 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 S(0.102)KEFVS(0.835)S(0.063)DESSSGENK 186.86 9.643899999999997e-35 49358000.0 23838.0 26467.0 24426.0 24115.0 27527.0 26991.0 23830.0 24958.0 25099.0 31733.0 30769.0 True False 26258.016211391892 28697.466975944582 26083.6952454702 25604.528780861354 25593.598482994672 26771.194244837527 24736.863690276365 24460.19311082777 24044.176314123637 29729.372964412338 26984.608060761322 0.9730738409194841 1.0634754046205308 0.9666138261759247 0.9488567972974653 0.9484517405391062 0.9920912760547327 0.9167027230699921 0.9064498196805632 0.8910330014793357 1.1017159447886224 1.0 14.719849112518611 -5.947845748812161 7.306720305847132 0.9457588087553936 1.018212040656599 0.06000298283428618 0.059470525613269355 0.21302688106902545 24.473297809308594 0.00632691585924195 0.019839169575734564 1.1275978813132665e-06 5.947845748812161 0.07245323190120545 SKEGDVEEPTDDS(ph)LPTTGDAGGREPMEEK ddPTM_A549_MK2206_60min_R1 1 SKEGDVEEPTDDSLPTTGDAGGREPMEEK 29 2 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 1 SKEGDVEEPT(0.001)DDS(0.957)LPT(0.035)T(0.007)GDAGGREPMEEK 99.25 1.0572e-10 13482000.0 2964.1 3147.8 2994.5 2421.9 4137.4 3368.5 2552.9 2625.9 4009.8 4439.8 4250.5 True False 3464.36761471268 3308.0095746591255 3419.1651279590374 3015.265608723222 3528.793940780636 3724.952434170666 3016.7288847271507 2998.129366481479 3101.5867023348223 3436.846096424985 3194.983542167852 1.0843146980225276 1.035376092239456 1.0701667419667127 0.9437499658221438 1.1044795361876223 1.165875312034697 0.9442079575409166 0.938386482093487 0.9707676616795158 1.0757007199145148 1.0 11.641592784318245 -7.80286202613994 24.999989072650266 0.9786360782458832 1.0620758157186787 0.3036295794250429 0.060746561940920304 121.6778464742198 73436.35989331159 0.008463867639590793 0.011694574050782367 1.574482992837689e-08 7.80286202613994 0.08343973747279554 SKEGDVEEPTDDS(ph)LPTTGDAGGREPMEEK ddPTM_A549_PD325901_60min_R1 2 SKEGDVEEPTDDSLPTTGDAGGREPMEEK 29 2 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 1 SKEGDVEEPT(0.003)DDS(0.973)LPT(0.012)T(0.012)GDAGGREPMEEK;SKEGDVEEPT(0.046)DDS(0.797)LPT(0.078)T(0.078)GDAGGREPMEEK 76.274 3.7575e-06 38946000.0 8592.6 9039.1 7989.2 9412.2 10335.2 9174.2 8909.9 10680.4 9662.7 9442.7 10543.599999999999 True False 9464.914426462212 9800.856679724211 8531.395154962354 9993.570217342865 9609.2912065044 9099.488356896321 9248.971120184362 10467.371043388284 9256.610321944398 8846.486310498734 9246.804041387217 1.0235876508357664 1.0599182848319424 0.9226317673411476 1.0807593815780288 1.0392013460537013 0.984068475569339 1.000234359762297 1.131998796182768 1.0010605048526269 0.9567074495039881 1.0 13.174739099981792 -8.934916297061642 24.99999999554517 1.0004636692152422 1.0295959041815206 0.10729157737749917 0.05260734918266202 126.98513465789824 48776.84504103922 0.00843320582365251 0.008977772772554895 1.1616724850494402e-09 8.934916297061642 0.02913223496627837 SKEGHSLEMENENLVENGADS(ph)DEDDNSFLK ddPTM_A549_MK2206_60min_R1 1 SKEGHSLEMENENLVENGADSDEDDNSFLK 30 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SKEGHSLEMENENLVENGADS(0.981)DEDDNS(0.019)FLK 106.39 7.7542e-15 4975300.0 1008.2 1069.0 819.59 731.43 1351.7 1357.6 1197.8 1067.2 1739.8 1328.6 1486.3 True False 1178.3595118765645 1123.4075339318267 935.8201860824669 910.6303828351406 1152.8667205861632 1501.2603308980545 1415.4247554256665 1218.4788681629295 1345.738077889701 1028.4683372472255 1117.2106902068178 1.0547334734672353 1.0055467100156925 0.8376398420509457 0.8150927938816669 1.0319152248469308 1.3437575777404542 1.2669273287777467 1.0906437602538201 1.204551737363503 0.9205679342871625 1.0 10.125685568113832 -6.998869229044232 24.991037911238568 1.130383223709378 0.9268270342386179 0.3756018679863924 0.12622889812119453 33.55419266907604 741535.968701639 0.018760726058615874 0.035250860533519994 1.0026070889074357e-07 6.998869229044232 -0.20355618947076015 SKEGHSLEMENENLVENGADS(ph)DEDDNSFLK ddPTM_A549_PD325901_60min_R1 1 SKEGHSLEMENENLVENGADSDEDDNSFLK 30 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SKEGHSLEMENENLVENGADS(0.999)DEDDNS(0.001)FLK 133.4 6.5225e-28 9098800.0 1273.7 1091.7 1749.9 1427.1 1901.1 1656.8 1723.3 2036.0 1728.7 1869.7 2103.5 True False 1403.005086351618 1183.701390321483 1868.6587370035322 1515.2487258207425 1767.573294438957 1643.3075701102882 1788.8811245259444 1995.3903827888987 1656.0487507161852 1751.646822915001 1844.7828351851365 0.7605258784895497 0.6416480941523345 1.012942391572068 0.8213697010405439 0.958147084158862 0.8907864593966537 0.969697403080194 1.081639716464864 0.897693061281107 0.9495138340980993 1.0 10.849235279245065 -5.761147075079022 24.999999355590298 0.9513977334283142 0.7010869379434027 0.6586336170298444 0.0700831436607502 3.196217490002043 273220.65690054814 0.009583855817224743 0.033045037063367415 1.733216939439234e-06 5.761147075079022 -0.25031079548491153 SKELS(ph)PGSAQK ddPTM_A549_PD325901_60min_R1 2 SKELSPGSAQK 11 1 E7ERK8;Q17R89-2;Q17R89-3;Q17R89 E7ERK8 ARHGAP44 Rho GTPase-activating protein 44 1 S(0.041)KELS(0.958)PGS(0.001)AQK;S(0.005)KELS(0.992)PGS(0.003)AQK 81.619 0.00021454 15580800.0 5357.6 5164.9 5130.8 5254.6 6174.3 5826.299999999999 5331.299999999999 6237.700000000001 7239.9 5834.9 6734.1 True False 5901.499607943339 5600.164249218128 5479.006942006813 5579.164707937547 5740.638468178658 5778.852544503608 5534.185538899301 6113.284180119018 6935.632180430442 5466.483418209738 5905.8483909770475 0.9992636480407535 0.948240435324086 0.9277256338611125 0.9446847156559915 0.9720260474260062 0.9784965955666144 0.9370686771022478 1.035123791775436 1.1743667837844767 0.9256051046893499 1.0 12.52792860618763 -8.447898110833489 4.8242693542318955 1.083376480592447 0.9581744626236628 0.1336206124472935 0.06343333879728956 0.15057580028110606 6.472599139249358 0.01057036921585812 0.01272322122307576 3.5653476969391195e-09 8.447898110833489 -0.12520201796878427 SKELVSSSSSGSDS(ph)DSEVDKK ddPTM_A549_MK2206_60min_R1 1 SKELVSSSSSGSDSDSEVDKK 21 2 P53999;D6RC37;D6R970 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 SKELVSSSSSGS(0.008)DS(0.744)DS(0.248)EVDKK 148.1 1.6398e-22 16108000.0 1363.4 1501.8 1415.9 1728.9 2282.3 1270.7 1291.3 1430.7 2108.8 2451.0 2422.9 True False 1593.50858807033 1578.235205293563 1616.6959107287373 2152.4805776132707 1946.5766933445282 1405.1646305776057 1525.9124951420636 1633.5061063349915 1631.1601670616174 1897.3173977065708 1821.2270613618373 0.8749642600186113 0.8665779455931348 0.8876959633577155 1.1818847980458493 1.068827020332632 0.7715482931199598 0.8378485733684685 0.896926111516004 0.8956380023487593 1.0417797088342386 1.0 10.83069508609783 -10.860101589643364 1.155226249025527 0.999184839874544 0.9205198517608574 0.10594247124920397 0.10819640746784814 1.2354101266017794 2.9742703184319437 0.07563738347986758 0.019181428052661213 1.3800614045373538e-11 10.860101589643364 -0.0786649881136866 SKELVSSSSSGSDS(ph)DSEVDKK ddPTM_A549_PD325901_60min_R1 4 SKELVSSSSSGSDSDSEVDKK 21 2 P53999;D6RC37;D6R970 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 SKELVSSSSSGS(0.001)DS(0.999)DSEVDKK;S(0.001)KELVS(0.004)S(0.019)S(0.034)S(0.028)S(0.016)GS(0.016)DS(0.866)DS(0.017)EVDKK;SKELVS(0.007)S(0.007)S(0.007)S(0.007)S(0.007)GS(0.007)DS(0.953)DS(0.008)EVDKK;SKELVSSSSSGS(0.001)DS(0.914)DS(0.085)EVDKK 226.96 1.7507999999999996e-76 55731700.0 9622.33 9555.15 9563.46 9255.599999999999 11436.8 11054.0 11102.2 11569.7 12009.2 11801.6 10912.7 True False 10599.18185801505 10360.396024301846 10212.493905356772 9827.29739100727 10633.518622818088 10963.97988894202 11524.700296356956 11338.933257245939 11504.495087117952 11056.44496192634 9570.50708130489 1.1074838321492477 1.082533656397364 1.0670797083788741 1.0268314215245709 1.111071600750361 1.145600728968599 1.2041890987019281 1.184778733343765 1.202077903436374 1.1552621891398098 1.0 13.224379650784366 -6.96565275748959 22.614317291226076 1.1177349768718654 1.0712062690299289 0.18549237890664072 0.05920668972765152 163.97949263984205 107962.114822617 0.012438155456834608 0.0235057498389232 1.0822989634503547e-07 6.96565275748959 -0.04652870784193652 SKENKS(ph)PAIK ddPTM_A549_MK2206_60min_R1 1 SKENKSPAIK 10 2 J3QRU1;P07947 J3QRU1 YES1 Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes 1 S(0.006)KENKS(0.994)PAIK 55.261 0.0036027 8121400.0 2782.0 3199.0 2942.1 2527.0 3882.6 2957.9 3232.6 2714.3 3899.0 4415.6 4557.9 True False 3251.5335866302325 3361.815435966245 3359.334020026142 3146.1151134413426 3311.4746832491187 3270.9030147048866 3819.9215765478466 3099.0603371951256 3015.882725423579 3418.112893232615 3426.0476383594555 0.9490625729265142 0.9812518069877254 0.9805275275257821 0.9182928684984202 0.9665582714532249 0.9547161510781388 1.1149645246547113 0.9045584487783404 0.8802804408369868 0.9976839945136782 1.0 11.742329496547256 -9.624489286078076 0.0036010566541665955 0.8089230159640166 1.1011809876736642 0.0 0.06059752773988838 391405.0100122257 598.6977685470123 24495.872757443518 24091.617559819562 2.3741639919660955e-10 9.624489286078076 0.2922579717096476 SKENKS(ph)PAIK ddPTM_A549_PD325901_60min_R1 2 SKENKSPAIK 10 2 J3QRU1;P07947 J3QRU1 YES1 Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes 1 S(0.025)KENKS(0.975)PAIK;S(0.015)KENKS(0.985)PAIK 69.92 0.00069194 28210000.0 8469.2 7290.0 8149.599999999999 8366.4 10653.2 8768.5 8392.4 8874.3 8652.8 9003.099999999999 10204.900000000001 True False 9328.986949304484 7904.353884257228 8702.680863525915 8883.173526526993 9904.955983544833 8697.092243186906 8711.777374497493 8697.29512474633 8289.152906922542 8434.642729521336 8949.761994191014 1.0423726301726919 0.8831915183205625 0.9723924355948828 0.9925597498897466 1.106728423613254 0.9717679921356447 0.9734088325647108 0.9717906610691377 0.926186965899512 0.9424432443003485 1.0 13.127633601188032 -7.498678255185772 24.896446037248598 0.9657376265100893 0.9959187094933702 0.09694150613757602 0.05315947461743415 1797.5763628763534 1849272.3525499057 0.008422383011211723 0.013416814504517354 3.171916490682939e-08 7.498678255185772 0.030181082983280927 SKESVPEFPLS(ph)PPK ddPTM_A549_MK2206_60min_R1 6 SKESVPEFPLSPPK 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK 173.21 3.1239999999999995e-23 1052987600.0 67711.59999999999 71090.5 66406.8 62249.7 93887.79999999999 69245.90000000001 64837.5 69602.2 101775.0 105216.1 101455.49999999999 True False 79139.66269032049 74708.7027979239 75824.28279156804 77500.8792944952 80077.0289924165 76573.4551762916 76617.63447980602 79468.52499779774 78723.12500127855 81447.70993424504 76261.2993206471 1.0377434346820011 0.9796410953320481 0.9942694848767054 1.0162543778415862 1.0500349417825394 1.0040932407187557 1.0046725555731837 1.0420557439451115 1.0322814547163757 1.068008421831252 1.0 16.21866349109453 -6.350754167565252 6.98537252695599 1.0184918158105352 1.0015207994267945 0.07708257046907119 0.02482361109820209 0.43408594104663245 29.14453990663506 0.002947745087634676 0.006894176834908441 4.459085835717452e-07 6.350754167565252 -0.016971016383740656 SKESVPEFPLS(ph)PPK ddPTM_A549_PD325901_60min_R1 8 SKESVPEFPLSPPK 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK 185.85 1.1259e-26 2378145600.0 101465.0 101619.2 101214.90000000001 106043.1 130420.4 110036.7 105695.70000000001 111194.5 113788.60000000002 121922.8 128481.5 True False 111765.65210541511 110183.00661661339 108083.95176863756 112593.14144564621 121260.12102995461 109140.59759775148 109718.00770240645 108976.63846710231 109006.46085251548 114224.57360052472 112679.09001133319 0.9918934568443337 0.9778478562928691 0.9592192460710017 0.9992372270163139 1.0761545999151958 0.9685967253265374 0.9737211020373975 0.9671416272188701 0.9674062937635695 1.0137157975719904 1.0 16.781860292202317 SKESVPEFPLS(ph)PPKK ddPTM_A549_MK2206_60min_R1 1 SKESVPEFPLSPPKK 15 2 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 SKESVPEFPLS(1)PPKK 47.397 0.0059492 6756200.0 1140.7 1245.3 1468.8 1258.2 1615.2 1263.9 1353.2 1458.0 2166.2 1646.5 1484.8 True False 1333.222272562583 1308.6804508936432 1677.0979261800753 1566.4590564827442 1377.606219642502 1397.6450590910802 1599.0589238954838 1664.675964937734 1675.5591587105823 1274.5545064560874 1116.0831816047119 1.1945545766989043 1.1725653360460226 1.5026639177276488 1.4035325344034653 1.234322174501161 1.2522767855721442 1.4327417080117149 1.4915339576609798 1.5012851965939062 1.1419888118227213 1.0 10.124228839800955 -10.914353700341792 1.1837444874589442 1.001171600858334 1.366273197569128 0.4182921958233151 0.12499897644630828 0.30699139852733076 0.7681190379127945 0.09035417914147457 0.02171163151667819 1.2179972273179758e-11 10.914353700341792 0.365101596710794 SKESVPEFPLS(ph)PPKK ddPTM_A549_PD325901_60min_R1 2 SKESVPEFPLSPPKK 15 2 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 SKESVPEFPLS(0.999)PPKK;SKESVPEFPLS(1)PPKK 61.648 0.0010569000000000002 20553200.0 4721.1 5401.4 5765.0 5565.4 6462.2 6255.4 6154.7 5883.0 6382.4 5948.3 5675.0 True False 5200.382596509872 5856.594934214949 6156.247567761227 5909.162118059534 6008.317365379742 6204.458096371258 6388.920476481067 5765.658949875784 6114.169923393868 5572.723322856774 4977.010976788993 1.044880676527057 1.1767293585503473 1.236936706885272 1.1872913573262671 1.207214007242579 1.2466233498994963 1.2836862338212067 1.1584581542545846 1.2284823063296786 1.1196927932942025 1.0 12.281063853541914 -10.736088774228996 0.857380185907183 0.9924644688984424 1.20174611977019 0.32752227981924253 0.06798713383012636 0.350843257877058 0.4312096451342373 0.04844849776295674 0.010811989265559072 1.8361629745142063e-11 10.736088774228996 0.20928165087174755 SKESVPEFPLS(ph)PPKKK ddPTM_A549_PD325901_60min_R1 1 SKESVPEFPLSPPKKK 16 3 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 1 SKESVPEFPLS(1)PPKKK 59.512 0.00088007 5588200.0 1564.5 1689.7 1999.3 1847.5 1919.0 2758.5 1892.3 2482.0 2736.7 2137.3 2077.6 True False 1723.3268882759728 1832.0969490026655 2134.9845207675667 1961.6158790230686 1784.2160601906048 2736.03569057776 1964.3125120062932 2432.4945629086674 2621.686016130608 2002.3505132461003 1822.0683709915081 0.9458080254903917 1.0055039526347194 1.1717367771472704 1.0765874158474216 0.9792256364231242 1.5016097826718224 1.0780674003672983 1.3350182691470496 1.4388516138414582 1.098943675838294 1.0 10.83136138026732 SKESVPEFPLSPPK ddPTM_A549_MK2206_60min_R1 2 SKESVPEFPLSPPK 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 0 ; 91.20700000000001 6.6688e-05 7500900.0 3539.7000000000003 4398.0 4032.3999999999996 4301.3 5970.3 3919.2 3529.3 4298.2 5800.3 4985.5 5663.2 False True 4137.114822643791 4621.83941462318 4604.254954744374 5355.118693092698 5092.076778808586 4333.927142645589 4170.528126000839 4907.4830126854395 4486.541311175785 3859.272087419875 4256.871143631334 0.971867525009135 1.085736274056092 1.081605432579926 1.2579940788446091 1.1962017658032227 1.0181015577907584 0.9797167885244371 1.1528380463259922 1.0539528117706964 0.906598287146581 1.0 12.055577704765815 -7.2891850725063465 24.746659811866376 1.0324098841367642 1.1225306220972298 0.23650395127065038 0.08755940515796344 752.0421878780331 670752.2421928807 0.012273836235345158 0.01962382704426117 5.138246410191403e-08 7.2891850725063465 0.0901207379604656 SKESVPEFPLSPPK ddPTM_A549_PD325901_60min_R1 1 SKESVPEFPLSPPK 14 1 P16949;A2A2D0;P16949-2 P16949 STMN1 Stathmin 0 100.45 3.1837e-05 2044100.0 1819.5 2375.2 2467.7 3035.1 2730.5 2703.3 2720.3 3449.8 2854.9 2833.1 3017.2 False True 2004.2143005548933 2575.366439765124 2635.172961485582 3222.571233787777 2538.719099713623 2681.285221076257 2823.8225051052796 3380.9910326842537 2734.91848118218 2654.2175825001277 2646.103527606652 0.7574209699828582 0.9732674526512166 0.9958691842526071 1.2178553107113421 0.9594179038073556 1.0132956602425252 1.067162518640898 1.2777243964231033 1.0335644288475212 1.0030664162640737 1.0 11.369653792175455 -5.230287118806235 1.924891633960906 1.0456597443916407 0.6551134531312971 0.4636672395969671 0.09459646760991153 0.6266214056665274 2.2441615524364598 0.013316282122659253 0.44571512225120535 5.884544903535548e-06 5.230287118806235 -0.39054629126034357 SKETSSPGTDDVFTPAPSDS(ph)PSSQR ddPTM_A549_MK2206_60min_R1 2 SKETSSPGTDDVFTPAPSDSPSSQR 25 1 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 SKETSSPGTDDVFTPAPS(0.019)DS(0.967)PS(0.013)S(0.002)QR;SKETSSPGTDDVFTPAPS(0.007)DS(0.785)PS(0.179)S(0.029)QR 174.19 1.6827e-48 181641000.0 8185.299999999999 8033.2 8777.1 6740.8 11687.4 7728.1 7210.5 7526.4 10473.3 11452.2 11962.900000000001 True False 9566.778528628487 8442.05556742858 10021.82476026357 8392.29630260601 9968.198942205161 8545.882412502395 8520.554515776226 8593.29024863331 8101.1142724233805 8865.140066101676 8992.181770756346 1.0638995932823332 0.9388217212071 1.1145042455498115 0.9332881069974324 1.1085406407845246 0.9503680675467026 0.947551409991076 0.9556401847413406 0.9009064183699196 0.9858719821403272 1.0 13.134455483601513 -7.401023187451833 18.380907110758145 0.9516535845016916 1.0261525472890325 0.28178505765495765 0.059074943966631994 2.700372494922393 396.4275302546234 0.00864186916616186 0.013814986658974158 3.971703435493843e-08 7.401023187451833 0.07449896278734092 SKETSSPGTDDVFTPAPSDS(ph)PSSQR ddPTM_A549_PD325901_60min_R1 4 SKETSSPGTDDVFTPAPSDSPSSQR 25 1 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 SKETSSPGTDDVFTPAPS(0.024)DS(0.962)PS(0.01)S(0.003)QR;SKETSSPGTDDVFTPAPS(0.039)DS(0.77)PS(0.158)S(0.033)QR;SKETSSPGTDDVFTPAPS(0.003)DS(0.99)PS(0.006)S(0.001)QR;SKETSSPGTDDVFTPAPS(0.009)DS(0.972)PS(0.017)S(0.003)QR 209.71 4.847299999999999e-81 302187000.0 19522.4 17347.4 19254.2 19097.3 23299.399999999998 19343.1 18478.1 19345.899999999998 20458.0 20720.0 22146.199999999997 True False 21504.299676368722 18809.3262787056 20560.905796910345 20276.89684788485 21662.93052256643 19185.576206784368 19181.294207104307 18960.030847935046 19598.221404611395 19411.73566390268 19422.357796328528 1.107193055646094 0.9684368126644846 1.0586204832863826 1.0439976989672108 1.1153604907155734 0.9878088133260051 0.9875883457738694 0.9761961470774224 1.0090546992351315 0.9994530976858095 1.0 14.245430728328856 -7.3254571039334975 24.999881518501972 0.9996155899586051 1.0528828633302965 0.42825427260580506 0.03694942894855794 174.42206070347333 68114.08666891175 0.005173909444808761 0.008271068233800012 4.726535194521876e-08 7.3254571039334975 0.05326727337169135 SKEYFSK ddPTM_A549_MK2206_60min_R1 1 SKEYFSK 7 1 Q06830;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 62.262 0.027706 14484000.0 4845.3 5599.8 5961.2 5456.1 7312.7 5824.8 5779.6 4707.7 7884.1 7562.2 7462.9 False True 5663.068183788447 5884.805901320345 6806.5877978926055 6792.844744933635 6237.011517075112 6441.176469810687 6829.678507645838 5375.030891726595 6098.3639383206055 5853.893767824005 5609.655964438175 1.0095214786234437 1.049049342531245 1.2133699180559832 1.2109200257549058 1.1118349425729477 1.1482302142312915 1.2174861615296675 0.958174783944156 1.0871190634471246 1.0435388203722564 1.0 12.453696578915293 -9.247022706540635 0.5822678927355251 1.0129318925476953 1.1320038147515028 0.20398969906157438 0.0786316695903111 0.7530663143356515 0.5795870984249194 0.03337211887220074 0.02287152099964701 5.662096847032858e-10 9.247022706540635 0.11907192220380747 SKEYFSK ddPTM_A549_PD325901_60min_R1 2 SKEYFSK 7 1 Q06830;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 ; 81.548 0.01553 73952000.0 10418.599999999999 10213.0 11041.2 11218.2 12435.6 11060.7 11956.7 11965.900000000001 12582.4 11800.9 12049.8 False True 11476.28860223205 11073.685352526616 11790.522228129272 11911.122735619278 11562.166356491023 10970.625326363404 12411.718761457294 11727.230737433048 12053.60548447465 11055.789160045804 10567.750989975682 1.0859726552147364 1.0478753107478451 1.115707801907282 1.127119928063964 1.0940990535695456 1.0381229967255927 1.1744900852821718 1.1097186855138073 1.1406027163119583 1.0461818385513686 1.0 13.367380757136337 -10.886181702651983 1.1255697161019482 0.999767723407092 1.1059378185438575 0.37207035770660435 0.03899384248585267 0.3221317345734804 0.7220826414017928 0.02672581831230741 0.006360838592447683 1.2996257193004112e-11 10.886181702651983 0.10617009513676556 SKFDS(ph)DEEEEDTENVEAASSGK ddPTM_A549_MK2206_60min_R1 2 SKFDSDEEEEDTENVEAASSGK 22 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 SKFDS(1)DEEEEDTENVEAASSGK;S(0.003)KFDS(0.996)DEEEEDTENVEAASSGK 282.8 9.988199999999998e-140 75138000.0 3629.9 5169.2 4255.9 5159.9 7750.900000000001 6747.9 7078.9 7634.6 10913.8 11559.8 11266.6 True False 4242.538377465521 5432.29020056165 4859.450615488685 6424.075731636713 6610.752877555145 7461.9582991065 8365.044499234224 8716.827929981915 8441.841725757342 8948.433151370222 8468.792277658707 0.5009614403529116 0.6414480391604866 0.5738068022176279 0.7585586611427338 0.7806016089206478 0.8811124484410476 0.9877494009744249 1.0292881964973382 0.996817662894807 1.0566362779940703 1.0 13.047940528214195 -6.808634228743825 0.7945066537585694 1.00466169693346 0.5371699363568795 0.9522308233254179 0.04124674462328732 0.09102688718501632 0.10396575011211304 0.006170272373185807 0.02354252531459706 1.5536950112139696e-07 6.808634228743825 -0.4674917605765806 down SKFDS(ph)DEEEEDTENVEAASSGK ddPTM_A549_PD325901_60min_R1 4 SKFDSDEEEEDTENVEAASSGK 22 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.037)KFDS(0.961)DEEEEDT(0.002)ENVEAASSGK;S(0.006)KFDS(0.97)DEEEEDT(0.024)ENVEAASSGK;S(0.004)KFDS(0.996)DEEEEDTENVEAASSGK;S(0.024)KFDS(0.976)DEEEEDTENVEAASSGK 288.7 1.5598999999999994e-156 216519000.0 13837.6 13364.400000000001 13344.599999999999 13485.0 16768.4 15979.8 14143.199999999999 15256.9 14877.300000000001 14704.6 16609.8 True False 15242.382965297285 14490.664890365875 14250.244803598689 14317.937823342943 15590.645431839559 15849.665806885796 14681.427215456006 14952.589160693491 14252.058818204374 13776.14904649726 14566.899898197327 1.046371092807712 0.9947665592291957 0.9782620120401991 0.9829090556951522 1.0702788884935581 1.0880603229000847 1.0078621613424317 1.0264770998078934 0.9783865419414384 0.945715913665479 1.0 13.830406257818167 -8.752400966347858 24.714691140117004 0.9897936446460232 1.023570023236592 0.2534509016886667 0.0354563783069378 230.21019152316967 629488.4530377565 0.006024763009428759 0.006783586783168476 1.7684754432459438e-09 8.752400966347858 0.03377637859056892 SKFS(ph)PQK ddPTM_A549_MK2206_60min_R1 2 SKFSPQK 7 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 S(0.008)KFS(0.992)PQK;S(0.001)KFS(0.999)PQK 67.704 0.0065027 220789000.0 19918.5 22688.0 21294.8 18740.3 28610.0 22984.0 21380.0 23167.3 28425.0 28992.0 29277.0 True False 23280.25583943001 23842.72229171684 24314.722847507805 23331.674341284022 24401.506899437834 25416.151624455582 25264.46925279742 26451.335721880652 21986.782885397595 22442.68706418152 22006.71289590595 1.0578706574465735 1.0834295155526137 1.1048775417991312 1.060207149138778 1.1088210681376864 1.1549272144675415 1.1480346643454202 1.2019666838477074 0.9990943667687844 1.0198109626975085 1.0 14.425656048044189 -8.796629854202559 24.83740347991886 0.9995722837791503 1.1140233489456954 0.5866231337055027 0.04053051136079652 78.60627402893648 55479.89162193769 0.0073081780541924156 0.007780303044456523 1.5972398823683567e-09 8.796629854202559 0.11445106516654513 SKFS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 SKFSPQK 7 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 S(0.009)KFS(0.991)PQK 48.64 0.04698 10896000.0 2022.0 1928.1 2075.4 1703.9 2099.4 1987.7 2264.2 2086.1 1681.9 2018.2 2424.3 True False 2227.271951482274 2090.587753667539 2216.249124394041 1809.146033162332 1951.9453865368196 1971.512830219834 2350.36537001778 2044.491098986209 1611.2155919648005 1890.7705075718343 2126.1264689038876 1.047572655746359 0.9832847595116623 1.0423881912991824 0.850911768242567 0.91807586006073 0.9272791901397269 1.1054682797065678 0.9616037093222563 0.7578173808237539 0.8893029343389014 1.0 11.054011700267614 -8.54873216367084 24.992432243555854 0.8842714785188581 0.9790698180490115 0.2136754738575134 0.0836291895765916 323.2425681110422 312476.2492644273 0.01802671693901219 0.0204406732074292 2.8266226607375065e-09 8.54873216367084 0.09479833953015337 SKFS(ph)PQKEAS(ph)PAAK ddPTM_A549_MK2206_60min_R1 1 SKFSPQKEASPAAK 14 2 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 2 S(0.151)KFS(0.85)PQKEAS(0.999)PAAK 56.718999999999994 0.011158 4639400.0 1279.1 1566.5 1517.4 1380.9 1956.4 1452.2 1733.0 1618.5 2240.5 2214.1 2500.1 True False 1494.9808090074516 1646.2281589375186 1732.5901369727992 1719.2205619909569 1668.6161516274094 1605.8708401076574 2047.8636676846554 1847.9273314483692 1733.0303273433 1713.9332722407657 1879.2561707502289 0.7955173074731113 0.875999868756753 0.9219552735490669 0.9148409826982857 0.8879130890182318 0.8545247130765404 1.0897203369922237 0.9833291278807653 0.9221895100397339 0.9120274813606366 1.0 10.875946025757704 SKFS(ph)PQKEAS(ph)PAAK ddPTM_A549_PD325901_60min_R1 1 SKFSPQKEASPAAK 14 2 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 2 S(0.419)KFS(0.583)PQKEAS(0.998)PAAK 52.784 0.017526 3538600.0 1891.9 1971.4 1973.7 1996.4 2150.3 2037.6 2601.6 2435.9 1876.2 2334.9 2852.0 True False 2083.964295256831 2137.536796628902 2107.64715082226 2119.713093846633 1999.2703461322856 2021.0064611641274 2700.605311650145 2387.314063573418 1797.349838661251 2187.4740155234745 2501.2220803175715 0.8331784337167844 0.8545969641997988 0.8426469474292579 0.8474709665035023 0.7993174064249605 0.8080076043897418 1.0797143256096868 0.9544590551792622 0.7185886662383245 0.8745620921616598 1.0 11.288417442920164 SKFS(ph)PQKEASPAAK ddPTM_A549_PD325901_60min_R1 2 SKFSPQKEASPAAK 14 2 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 S(0.459)KFS(0.541)PQKEASPAAK;S(0.02)KFS(0.918)PQKEAS(0.062)PAAK 79.311 0.00012164 109002000.0 5213.1 5092.4 5411.9 5926.9 6304.4 7412.0 7042.5 6735.1 5976.5 5783.6 6474.2 True False 5742.3300743186155 5521.554419779352 5779.184078398437 6292.991152033468 5861.600692999292 7351.639129440769 7310.5061913038735 6600.763146916262 5725.328488838594 5418.422508964651 5677.9144433352085 1.0113449456884682 0.9724617154562107 1.0178357099378452 1.1083279282977296 1.0323510069581439 1.2947780743808486 1.287533699963552 1.1625330414522717 1.008350609361337 0.954298019640794 1.0 12.471145394889245 -4.1994728155250405 16.26802341109136 1.0542298604602016 1.057593328255933 0.0 0.11767089113897103 0.0 0.0 0.016828796908173405 0.0 6.317237205225944e-05 4.1994728155250405 0.0033634677957314896 SKGDCQTLSEGS(ph)PGSSQSGSR ddPTM_A549_MK2206_60min_R1 1 SKGDCQTLSEGSPGSSQSGSR 21 1 O94972-2;O94972-3;O94972 O94972-2 TRIM37 E3 ubiquitin-protein ligase TRIM37 1 SKGDCQTLS(0.002)EGS(0.905)PGS(0.068)S(0.019)QS(0.003)GS(0.003)R 78.752 5.3918e-05 3369000.0 467.18 627.8 429.67 626.44 775.32 605.88 682.47 535.01 894.42 1104.5 996.19 True False 546.0285625456191 659.7523384493927 490.60366689936905 779.9178281219602 661.2714550601937 669.9938194494056 806.465964965232 610.8493058994083 691.8352980952442 854.9926828914356 748.8085295546865 0.7291965048399491 0.881069475586429 0.6551790578442384 1.0415450643781718 0.8830981872675104 0.8947465112982197 1.0769989031038871 0.815761682445949 0.923914820396979 1.141804145046126 1.0 9.548453058291344 -3.153439400465857 0.28314116827409097 0.9735872098275202 8.76844961455977e-15 0.3595906102075642 0.1119881164396268 19.836372807354515 0.4419374487608256 0.035137362169437816 8.560866347727252 0.0007023613412984404 3.153439400465857 -0.9735872098275115 SKGDS(ph)DIS(ph)DEEAAQQSK ddPTM_A549_PD325901_60min_R1 2 SKGDSDISDEEAAQQSK 17 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.15)KGDS(0.85)DIS(1)DEEAAQQSK;S(0.029)KGDS(0.971)DIS(1)DEEAAQQSK 144.27 8.1569e-17 40762000.0 14935.3 16047.9 15533.3 17207.5 18566.3 15760.5 14488.0 13742.8 11461.5 11366.4 11214.2 True False 16451.52066121326 17400.312853109954 16587.483147320985 18270.368193932052 17262.26713825784 15632.151713377125 15039.348768137803 13468.689072981968 10979.813013439893 10648.72356419804 9834.924492670863 1.6727653245811074 1.7692370557676302 1.6865897811093753 1.857702945004551 1.7552007797438554 1.5894531498463913 1.5291778578824227 1.3694755951628343 1.1164105043838637 1.0827458382759962 1.0 13.263698260961778 -8.352400746037612 0.934195035376038 1.030741767822541 1.7535352029835125 0.95836093472714 0.05923397996725369 0.059818190150443123 0.10268387256787927 0.012323151229179789 0.01569853288183003 4.442211723805696e-09 8.352400746037612 0.7227934351609715 up SKGDSDPKPGS(ph)PK ddPTM_A549_MK2206_60min_R1 4 SKGDSDPKPGSPK 13 2 Q9BVI0 Q9BVI0 PHF20 PHD finger protein 20 1 SKGDS(0.002)DPKPGS(0.998)PK;S(0.03)KGDS(0.109)DPKPGS(0.861)PK;S(0.001)KGDS(0.003)DPKPGS(0.997)PK;SKGDS(0.002)DPKPGS(0.997)PK 69.125 0.00071465 102467500.0 16138.439999999999 18806.42 17929.84 15410.51 23590.5 19503.84 16656.44 18244.21 26784.1 28378.4 29001.300000000003 True False 18862.214125024006 19763.586449285503 20472.560920983506 19186.08564180409 20120.368700146373 21567.72340319882 19682.699543548406 20830.38263804985 20717.544115418747 21967.69973034524 21799.476814838872 0.8652599456967024 0.9066082923527989 0.9391308376285372 0.8801167938463619 0.9229748434352547 0.9893688544175382 0.9028977947833327 0.9555450717913854 0.9503688685462554 1.0077168326990242 1.0 14.412005890437207 SKGDSDPKPGS(ph)PK ddPTM_A549_PD325901_60min_R1 4 SKGDSDPKPGSPK 13 2 Q9BVI0 Q9BVI0 PHF20 PHD finger protein 20 1 SKGDS(0.001)DPKPGS(0.999)PK;SKGDS(0.003)DPKPGS(0.997)PK;S(0.002)KGDS(0.028)DPKPGS(0.97)PK;SKGDSDPKPGS(1)PK 74.257 0.00037703 177858000.0 45503.3 47663.2 50234.0 47621.799999999996 59190.4 54734.3 55356.4 57131.9 55966.4 61539.700000000004 67005.4 True False 50122.76151824101 51679.94513801497 53643.181321581535 50563.2904290451 55033.07049979468 54288.562007899316 57463.01809418438 55992.35943539149 53614.32683639859 57654.07283956909 58764.160582226774 0.8529478005238561 0.8794466665732578 0.9128554001298186 0.8604443580589147 0.9365073874030533 0.92383795616267 0.9778582306774934 0.9528317750245612 0.9123643783080644 0.9811094427001238 1.0 15.842648923824342 -2.000000108811935 0.017193131858862724 1.6530008119093258 6.813595545935208e-06 0.6823661366114009 0.02643244584415817 1578.3051160513683 2.0363120592394464 75.23468130135124 126.90225485428786 0.009999997494512919 2.000000108811935 -1.6529939983137798 SKGES(ph)DDFHMDFDSAVAPR ddPTM_A549_PD325901_60min_R1 3 SKGESDDFHMDFDSAVAPR 19 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.041)KGES(0.959)DDFHMDFDSAVAPR;S(0.154)KGES(0.846)DDFHMDFDSAVAPR;S(0.18)KGES(0.82)DDFHMDFDSAVAPR 128.07 8.7895e-17 24329600.0 4483.64 5331.99 5461.54 5536.71 6180.26 6469.58 5354.88 6575.47 6530.4 5906.75 6596.4 True False 4938.815832118684 5781.33550992053 5832.192947308006 5878.700001919251 5746.179858339543 6416.893885462413 5558.662888702768 6444.317092493579 6255.949998077732 5533.796796947738 5785.084618024827 0.8537154005890616 0.9993519354768613 1.008143066591697 1.0161821978545902 0.9932749886554698 1.1092134876418283 0.9608611205760781 1.113953817099711 1.081392997880413 0.9565628097652813 1.0 12.498122346347829 -4.259552724856765 0.9162699639449684 1.0405852215841769 2.6388805071048508e-11 0.465452235822824 0.052142706549277086 6.110877693980871 0.9699019908085725 0.007103996218373913 9.810409942044155 5.501071315423803e-05 4.259552724856765 -1.040585221557788 SKGESDDFHMDFDS(ph)AVAPR ddPTM_A549_PD325901_60min_R1 2 SKGESDDFHMDFDSAVAPR 19 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 SKGESDDFHMDFDS(1)AVAPR;SKGESDDFHMDFDS(1)AVAPR 101.5 9.902799999999998e-10 9919500.0 1737.7 1735.53 2225.9 2532.5 2152.74 3076.4 2393.5 2502.8999999999996 2198.61 2699.0 2915.8 True False 1914.1100247728718 1881.7892039430644 2376.96295942406 2688.9267732751964 2001.5389689498293 3051.34681837717 2484.5859522734563 2452.9776960129348 2106.210067572228 2528.5846793857777 2557.1750847790927 0.7485252129062671 0.7358859450586376 0.9295268726698858 1.0515223573388934 0.7827148719160686 1.1932490804167082 0.9716135461597042 0.9592529313356895 0.8236471879101613 0.988819535446168 1.0 11.320335227132547 -5.772784391487106 7.327608547949024 0.9409529012592301 0.7414117722094508 0.3857016525102752 0.10527246414477025 0.10882895381740544 31.686528565479865 0.015048555885199079 0.05075642527910788 1.6873905342322193e-06 5.772784391487106 -0.1995411290497794 SKGHYEVTGS(ph)DDETGK ddPTM_A549_MK2206_60min_R1 4 SKGHYEVTGSDDETGK 16 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SKGHYEVT(0.018)GS(0.982)DDETGK;SKGHYEVT(0.02)GS(0.98)DDETGK;SKGHYEVT(0.004)GS(0.996)DDETGK;SKGHYEVTGS(1)DDETGK 138.3 2.8671000000000002e-11 27387300.0 6761.06 7409.65 6494.65 6131.91 9110.300000000001 6828.48 7121.599999999999 7692.740000000001 9181.37 9705.6 9102.039999999999 True False 7902.161635953345 7786.769535825974 7415.689029320141 7634.2282252719015 7770.18693834144 7551.065221221823 8415.50253651647 8783.2094530282 7101.804354635112 7513.098219168057 6841.752264475585 1.1549909044476399 1.1381250350523797 1.083887393559192 1.1158293855378376 1.1357012996051556 1.1036741655247007 1.2300215224412996 1.28376607534202 1.0380095741714874 1.098124855846988 1.0 12.740150150638232 -8.969415660487709 23.86895470024322 1.0167687986710385 1.1520938834787258 0.38493899705086854 0.059615609688284533 62.141089580877534 48497.329982379815 0.010139276007642355 0.010680301389171261 1.0729619956477394e-09 8.969415660487709 0.13532508480768723 SKGHYEVTGS(ph)DDETGK ddPTM_A549_PD325901_60min_R1 4 SKGHYEVTGSDDETGK 16 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SKGHYEVT(0.046)GS(0.953)DDET(0.001)GK;SKGHYEVT(0.026)GS(0.974)DDETGK;S(0.004)KGHYEVT(0.188)GS(0.784)DDET(0.024)GK;SKGHYEVT(0.122)GS(0.878)DDETGK 166.91 4.3191e-22 103066000.0 28294.0 26962.100000000002 26051.8 23044.6 31540.200000000004 25516.5 28674.5 27237.8 28626.0 28735.2 30151.6 True False 31166.386051058078 29234.29079049819 27819.831810199797 24468.012603916122 29324.92515978307 25308.70208396861 29765.72378878848 26694.52071135925 27422.948769596533 26920.85456802009 26443.144346740257 1.1786187619136177 1.1055527439232848 1.052062169513863 0.9253064719942197 1.1089802625306193 0.95709881366996 1.125649937786533 1.009506296275616 1.0370532494172562 1.0180655603968944 1.0 14.690606117050548 -5.579181287505158 2.2411106798887994 1.0216312122338171 1.1775996870898335 0.42862375750150683 0.05500505867658882 0.22888680019732302 1.9699828439841793 0.00686449441190093 0.05393641429752262 2.635231131915799e-06 5.579181287505158 0.1559684748560164 SKGHYEVTGS(ph)DDETGKLQGSGVSLASK ddPTM_A549_MK2206_60min_R1 4 SKGHYEVTGSDDETGKLQGSGVSLASK 27 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SKGHYEVTGS(1)DDETGKLQGSGVSLASK;SKGHYEVT(0.121)GS(0.879)DDETGKLQGSGVSLASK;SKGHYEVT(0.001)GS(0.999)DDETGKLQGSGVSLASK;SKGHYEVT(0.029)GS(0.969)DDET(0.002)GKLQGSGVSLASK 235.94 4.040699999999999e-112 142022000.0 10853.3 12750.900000000001 11876.9 12258.4 16547.8 11187.2 12066.2 10857.8 18165.1 16954.6 19318.100000000002 True False 12685.071702291118 13399.86634650265 13561.223011606846 15261.70855030049 14113.6405407381 12371.022078537648 14258.472352577366 12396.926400617924 14050.733853703989 13124.544084518904 14520.882617563304 0.8735744263195313 0.922799715376477 0.9339117578985364 1.051017968552486 0.9719547297811887 0.8519469790062654 0.9819287661847396 0.8537309147877545 0.9676225766544893 0.9038392796209578 1.0 13.82584152635984 -8.982352049030633 15.772911529421261 0.985720677425933 0.9330475923980909 0.0 0.06122973194263846 2.8497792289451938 2547.1103839672564 0.0099318260998004 0.010144249331095822 1.0414728454339264e-09 8.982352049030633 -0.05267308502784207 SKGHYEVTGS(ph)DDETGKLQGSGVSLASK ddPTM_A549_PD325901_60min_R1 4 SKGHYEVTGSDDETGKLQGSGVSLASK 27 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SKGHYEVT(0.004)GS(0.996)DDETGKLQGSGVSLASK;SKGHYEVT(0.023)GS(0.977)DDETGKLQGSGVSLASK;SKGHYEVT(0.019)GS(0.981)DDETGKLQGSGVSLASK;SKGHYEVTGS(1)DDETGKLQGSGVSLASK 312.78 1.3724999999999994e-190 301869000.0 14768.400000000001 14558.0 15865.1 15192.9 20159.0 19069.800000000003 17527.6 20130.0 19688.6 19876.0 19964.399999999998 True False 16267.677096078536 15784.85375130545 16941.801090596462 16131.330927420617 18743.10138477457 18914.501871372053 18194.622409470747 19728.491358320505 18861.156610950817 18621.02596794062 17508.905364758797 0.9291087453600295 0.9015328726989725 0.9676105237678776 0.9213214984809441 1.0704896162440807 1.0802789481884105 1.03916390147908 1.1267689754054642 1.0772321980170032 1.0635174261333467 1.0 14.095801270619685 -6.758073592452949 24.99934064220273 1.0497403045301699 0.930561717267542 0.7741064931543568 0.034550251015506316 42.314857053953794 314287.80276768125 0.006120925243249022 0.012343048261847607 1.745526343383386e-07 6.758073592452949 -0.11917858726262787 SKGKDS(ph)LSDDGVDLK ddPTM_A549_MK2206_60min_R1 2 SKGKDSLSDDGVDLK 15 2 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 S(0.005)KGKDS(0.693)LS(0.302)DDGVDLK;S(0.066)KGKDS(0.572)LS(0.362)DDGVDLK 102.36 2.1781e-06 20106000.0 5362.4 6595.9 6317.7 5995.6 9211.900000000001 6190.0 5812.2 5521.1 9368.4 8159.3 8909.9 True False 6267.4420219072435 6931.603136633247 7213.644858542936 7464.522269152714 7856.841712930139 6845.021691410548 6868.201505664598 6303.732832659619 7246.47235826065 6316.108463120043 6697.32592926982 0.9358126046271956 1.034980708694428 1.0770932958506034 1.1145526360797164 1.1731311565102127 1.0220529452651008 1.0255140003934984 0.9412313062307373 1.0819948789696578 0.9430791527580114 1.0 12.709369464015632 -11.077857513203094 1.3422761289052647 0.9994904832331932 1.0515894262616994 0.11404588808831406 0.06825150650863672 1.0789012808607479 3.4130263913668215 0.051662056846418995 0.010892185452434039 8.358772145107803e-12 11.077857513203094 0.05209894302850615 SKGKDSLS(ph)DDGVDLK ddPTM_A549_MK2206_60min_R1 2 SKGKDSLSDDGVDLK 15 2 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 S(0.001)KGKDS(0.026)LS(0.973)DDGVDLK;SKGKDS(0.014)LS(0.986)DDGVDLK 100.21 1.5849e-06 23596500.0 6548.9 7776.3 8166.0 6763.1 10389.2 6332.2 7293.200000000001 6062.4 11132.900000000001 9867.0 10846.3 True False 7654.194214767339 8172.080454737203 9324.061591221736 8420.059803607097 8860.962442490018 7002.269201025822 8618.280035290089 6921.763765321344 8611.315925588142 7638.037847070888 8152.8643673485885 0.9388349750330235 1.0023569737607279 1.1436546925229956 1.0327731977645305 1.0868526745001783 0.8588722791794764 1.0570861536474767 0.8489977820607835 1.0562319618704326 0.9368532951020835 1.0 12.993091298921025 SKGKDSLS(ph)DDGVDLK ddPTM_A549_PD325901_60min_R1 3 SKGKDSLSDDGVDLK 15 2 P07948-2;P07948;E5RJ37 P07948-2 LYN Tyrosine-protein kinase Lyn 1 SKGKDS(0.008)LS(0.992)DDGVDLK;SKGKDS(0.008)LS(0.992)DDGVDLK;S(0.024)KGKDS(0.236)LS(0.74)DDGVDLK 136.68 2.1103999999999998e-10 96872000.0 16176.7 15178.0 16452.5 17548.0 16682.5 22143.9 20059.9 20709.3 19486.0 18538.199999999997 20035.5 True False 17818.94667534288 16457.103327195626 17569.065586919605 18631.90010560044 15510.778751500644 21963.56742018665 20823.290471698485 20296.23676536844 18667.071184390345 17367.69488825099 17571.26051549884 1.0140960951336169 0.9365920738970055 0.9998750841706945 1.060362180002172 0.8827356886444921 1.2499710763956602 1.18507664565847 1.1550814324029866 1.062363805256028 0.9884148535007893 1.0 14.100930069713552 SKGQES(ph)FKK ddPTM_A549_MK2206_60min_R1 2 SKGQESFKK 9 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 SKGQES(1)FKK;S(0.121)KGQES(0.879)FKK 73.848 0.00045187 49318000.0 9489.0 17643.7 12815.300000000001 8796.599999999999 13678.6 11328.9 9967.1 14064.5 12926.7 15153.6 14420.1 True False 11090.511216223684 18541.688967664155 14632.702242221905 10951.767394894383 11666.49605993185 12527.716678484809 11777.993053767872 16058.185945724807 9998.82308969812 11730.391235367722 10839.191195486334 1.023186233751648 1.7106155462397696 1.3499810067300289 1.0103860331806795 1.0763253318005888 1.1557796566686278 1.0866117998428217 1.4814930058999025 0.9224694822120898 1.0822201605090704 1.0 13.403969488474218 -6.910251258051609 0.31489975650484864 0.9506289796822475 1.4532259845080706 0.08713334638929882 0.2198547251390976 2.810348451714423 0.42518501988936497 0.10395682470554204 0.4936731376539353 1.2295572132258112e-07 6.910251258051609 0.5025970048258231 SKGQES(ph)FKK ddPTM_A549_PD325901_60min_R1 2 SKGQESFKK 9 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 S(0.001)KGQES(0.999)FKK;S(0.017)KGQES(0.983)FKK 55.452 0.0036236999999999997 134012000.0 13262.8 8716.4 9081.0 7694.3 12180.4 9194.7 7876.8 8204.2 8402.099999999999 8361.2 8759.0 True False 14609.229692442672 9450.961618208457 9697.291268489105 8169.559435976837 11324.890724098823 9119.821411693072 8176.555934350344 8040.560794929606 8048.988956089809 7833.272405068683 7681.6985278757365 1.9018228376742408 1.2303218596658447 1.2623889408441484 1.0635095098213925 1.4742690933525295 1.1872141790775312 1.0644203107787742 1.0467165257464364 1.047813699910408 1.0197318179882884 1.0 12.907209630349199 -2.0000000000000004 0.47467904518619203 1.0424357480463429 20.611217012755862 0.6991084879342611 0.14111943030269974 33.357890836785934 0.336983363126402 0.026880196579105516 647.3760464892741 0.00999999999999999 2.0000000000000004 19.568781264709518 SKGQESFK ddPTM_A549_MK2206_60min_R1 2 SKGQESFK 8 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 69.954 0.0068980000000000005 25234000.0 9435.8 9735.8 9020.900000000001 7962.8 11082.5 8744.3 7774.5 8635.599999999999 13182.400000000001 12261.9 12501.2 False True 11028.332356838799 10231.310635036003 10300.199266256706 9913.68635746368 9452.27893089898 9669.61602200343 9187.026015241976 9859.72274541584 10196.607447967126 9491.928273740597 9396.807024432132 1.173625501530959 1.088807145707486 1.0961382137012832 1.0550058473785446 1.0059032718584748 1.0290320953555803 0.9776752881436519 1.0492630868953792 1.0851140628359692 1.0101227203092653 1.0 13.197954906073969 -5.252374927480269 0.9066481258840884 1.0344806019934083 1.2430890313309948 0.6776768012601988 0.030546109374256843 1.2688941244247103 0.7604260019738215 0.0058116062118536375 0.26217324312246776 5.592745699303567e-06 5.252374927480269 0.2086084293375865 SKGQESFK ddPTM_A549_PD325901_60min_R1 2 SKGQESFK 8 1 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 83.0 0.0034685000000000002 38100000.0 12687.5 12034.1 10990.3 11492.3 13925.3 13133.6 12788.2 12715.0 12869.8 13118.0 14040.5 False True 13975.525659956156 13048.255840677622 11736.167848042698 12202.153270093 12947.234967677025 13026.644316031208 13274.861948971544 12461.389350275465 12328.927061935075 12289.727241268109 12313.607510062702 1.1349659836514467 1.0596615029360457 0.9531055654041174 0.9909486931527888 1.0514574999322108 1.057906410074043 1.0780644046128076 1.0120015064709507 1.0012441156549658 0.9980606602269011 1.0 13.58796586878189 -5.426120157039381 3.7010975820481105 1.0105770876902676 1.1319716289577917 0.5067349246221685 0.034112924095011266 0.1495881316549396 3.4328065889629724 0.0049982852228590315 0.03651225753386315 3.7486927213737494e-06 5.426120157039381 0.12139454126752414 SKGS(ph)LEITESQSADAEPPPPPKPDLSR ddPTM_A549_MK2206_60min_R1 2 SKGSLEITESQSADAEPPPPPKPDLSR 27 2 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.14)KGS(0.797)LEIT(0.025)ES(0.031)QS(0.006)ADAEPPPPPKPDLSR;S(0.05)KGS(0.799)LEIT(0.05)ES(0.05)QS(0.05)ADAEPPPPPKPDLSR 100.36 1.0349e-12 5991200.0 663.24 699.0999999999999 770.15 794.0 1092.0900000000001 903.3499999999999 719.94 908.97 1444.23 1582.7800000000002 1169.17 True False 775.1786973388334 734.6812039024695 879.3688506587586 988.5300356440141 931.4450076828753 998.9418974048007 850.7437789456952 1037.8192811038766 1117.1142109613997 1225.2288987115492 878.8328215495561 0.8820547871346454 0.8359737891981335 1.0006099329657003 1.1248214807237629 1.0598659777414245 1.1366688554524722 0.9680382412728574 1.1809063745184163 1.271133921684566 1.3941546886599299 1.0 9.779444940512878 -5.98790175208904 2.6347464688250057 1.1186918598936737 0.8564796545842362 0.47015555912644746 0.11507962954510526 0.18297066692239658 2.520396509953227 0.015194733914000072 0.05593451873242057 1.0282488865731767e-06 5.98790175208904 -0.26221220530943745 SKGS(ph)LEITESQSADAEPPPPPKPDLSR ddPTM_A549_PD325901_60min_R1 1 SKGSLEITESQSADAEPPPPPKPDLSR 27 2 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.242)KGS(0.725)LEIT(0.032)ESQSADAEPPPPPKPDLSR 200.68 3.0816999999999993e-69 65574000.0 3556.0 3372.6 3301.5 3984.1 4198.5 4392.3 3387.6 4519.7 4156.7 3722.3 4121.1 True False 3917.002502211157 3656.8208381407285 3525.5596435322973 4230.188808452403 3903.6118440386936 4356.530565062426 3516.5169717658487 4429.551037863941 3982.0083543136266 3487.2733427483063 3614.2308258053067 1.0837720917668252 1.011783976837155 0.975466098722886 1.1704257454308693 1.0800671103149335 1.205382493546666 0.9729641357320652 1.2255860932393459 1.101758173795215 0.9648728902009981 1.0 11.819472932704771 -4.855464646361875 18.200520415163332 1.0679109405935872 7.863816356643041 0.0007317552286619788 0.09120530830306903 3185.7456674874898 404533.014646246 0.011484312925153914 7601.817272663374 1.3948752024996562e-05 4.855464646361875 6.795905416049454 SKGSGSRPPT(ph)PK ddPTM_A549_PD325901_60min_R1 2 SKGSGSRPPTPK 12 2 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79;M0QXV1 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 SKGSGSRPPT(0.999)PK;S(0.001)KGS(0.001)GS(0.004)RPPT(0.994)PK 63.128 0.0024849 28623000.0 5194.9 5261.799999999999 5827.5 5156.9 5674.799999999999 6217.0 5688.6 6044.799999999999 5906.8 5757.3 7022.0 True False 5722.28242371675 5705.230352288703 6222.989193604256 5475.430000830344 5276.221624997208 6166.370813239778 5905.082785921361 5924.2317219461365 5658.5577374503155 5393.783095453038 6158.338516125518 0.9291925750318918 0.9264236347757828 1.010498071405047 0.8891083181759191 0.8567605712452311 1.0013042961333203 0.9588759647523418 0.9619853969432864 0.9188448674319325 0.8758503744686164 1.0 12.58832545735703 -7.301611885610146 24.999896883481266 0.9630534519813384 0.9256654056109207 0.06680287829707221 0.04833542341635706 820.7854956243962 510784.532228487 0.006902033467684937 0.011033711819062651 4.9933052304197686e-08 7.301611885610146 -0.037388046370417705 SKGSLEIT(ph)ESQSADAEPPPPPKPDLSR ddPTM_A549_MK2206_60min_R1 2 SKGSLEITESQSADAEPPPPPKPDLSR 27 2 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.073)KGS(0.135)LEIT(0.792)ESQSADAEPPPPPKPDLSR;S(0.264)KGS(0.308)LEIT(0.36)ES(0.045)QS(0.023)ADAEPPPPPKPDLSR 224.05 6.838899999999998e-96 38629900.0 4359.85 4588.3099999999995 4887.679999999999 4461.87 6152.3 5224.03 4478.58 4858.75 7068.41 7029.76 7157.51 True False 5095.686091901448 4821.835380743446 5580.826519493349 5555.028350300956 5247.304819902526 5776.833387169534 5292.28001432149 5547.492691797816 5467.426420931341 5441.732333619646 5380.102729773401 0.947135463362438 0.8962348161233962 1.0373085421973722 1.0325134350241156 0.9753168449487083 1.073740349826525 0.9836763868901793 1.0311127817500738 1.0162308594359533 1.0114550979677746 1.0 12.393418005087046 -5.7619333398407795 24.999998774143965 1.0131586731049362 0.921685125433199 0.6313071006614834 0.028175522405147195 5.307265719890145 268686.72598899517 0.0034758461273070285 0.011864502928029331 1.7300818902975317e-06 5.7619333398407795 -0.09147354767173721 SKHEEEEWT(ph)DDDLVESL ddPTM_A549_MK2206_60min_R1 2 SKHEEEEWTDDDLVESL 17 1 D6RHI7;P51946 D6RHI7 CCNH Cyclin-H 1 S(0.02)KHEEEEWT(0.979)DDDLVES(0.001)L;S(0.011)KHEEEEWT(0.989)DDDLVESL 58.577 0.0023455 5642500.0 173.77 542.91 561.85 282.59000000000003 646.22 435.33000000000004 499.32 374.73 689.62 578.3900000000001 627.8699999999999 True False 203.09812773139305 570.541800043899 641.5287784751326 351.8245626859473 551.161894042458 481.3963316513335 590.039980697231 427.849125062495 533.422171096848 447.7312972906995 471.95255066955195 0.4303359044108583 1.2088965283363338 1.3593077896602221 0.7454659630228062 1.1678332774354816 1.0200100221269783 1.2502103863198752 0.906551144718917 1.1302453400031212 0.9486786259667627 1.0 8.88249801047458 -5.254010617512255 24.7557440460203 1.0745096892241182 0.43033555278832597 0.5542078956004062 0.16588372680782645 400.4189682419602 1334326.2416796805 0.020155520322452096 0.28906507960782596 5.571721271742307e-06 5.254010617512255 -0.6441741364357922 SKHEEEEWT(ph)DDDLVESL ddPTM_A549_PD325901_60min_R1 2 SKHEEEEWTDDDLVESL 17 1 D6RHI7;P51946 D6RHI7 CCNH Cyclin-H 1 SKHEEEEWT(1)DDDLVESL;SKHEEEEWT(1)DDDLVESL 127.32 2.4254e-12 30309000.0 2609.0 2187.62 1994.04 2072.06 2251.3599999999997 2322.83 1961.66 2091.44 3068.3999999999996 2772.5 2702.6 True False 2873.863759355712 2371.9784148530584 2129.3675455366174 2200.046440210308 2093.232240370358 2303.913642611832 2036.3120447615406 2049.72458849706 2939.445818648428 2597.443876842191 2370.1973331929407 1.2124997860343856 1.0007514486811604 0.8983925159801371 0.928212351520361 0.8831468211764978 0.972034526554877 0.8591318605604806 0.8647906905438267 1.2401692371700719 1.095876634602032 1.0 11.210791461830931 -8.751843966856374 24.99949586234485 1.1134132551088038 0.9466183202736557 0.30762032780794246 0.10640803546904623 193.99936049654303 505437.4980498591 0.021044396293495065 0.02371284453918127 1.7707450365972833e-09 8.751843966856374 -0.16679493483514818 SKLESVISDEGDLQFPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SKLESVISDEGDLQFPSPK 19 1 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5;H3BMM1 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 SKLESVISDEGDLQFPS(1)PK;SKLESVISDEGDLQFPS(1)PK 109.71 2.1332e-10 6450900.0 2673.8 3589.3999999999996 3403.1000000000004 2879.7 4816.0 3243.2 3097.3999999999996 3705.3 5254.1 4423.8 5259.2 True False 3125.0720718662533 3772.08512843302 3885.710752031192 3585.226629274643 4107.572779716622 3586.393271338074 3660.1574866049887 4230.537622005341 4064.054739073618 3424.460507537466 3953.195493464103 0.7905179688262312 0.9541863372730955 0.9829290654751365 0.9069186270201334 1.039051265364375 0.9072137406985133 0.9258731303970168 1.0701564415419813 1.0280429454583768 0.8662512423681538 1.0 11.948803585753693 -3.5621351259112037 0.4749362641535364 1.008592766154331 4.188224506929173e-35 0.2481353971897804 0.06854377553857276 11.30324321920516 0.48552527381764066 0.010217590341940195 9.174578513643857 0.00027407212942201937 3.5621351259112037 -1.008592766154331 SKLESVISDEGDLQFPS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SKLESVISDEGDLQFPSPK 19 1 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5;H3BMM1 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 SKLESVISDEGDLQFPS(1)PK;SKLESVISDEGDLQFPS(1)PK 110.94 1.4694e-10 14880000.0 4143.9 4258.2 4519.1 4911.4 5100.3 4804.0 4762.299999999999 5410.0 5748.3 5505.0 6171.3 True False 4564.585677422054 4617.053458154201 4825.793301555897 5214.766023401303 4742.0725230798 4764.877816761126 4943.531932530551 5302.093305937103 5506.718941251715 5157.413360510822 5412.269223093908 0.8433774243796249 0.853071654021467 0.8916395512929134 0.9635082455156022 0.8761708495293602 0.8803844783680768 0.9133935746279441 0.9796433043857667 1.0174510384211475 0.9529114587471688 1.0 12.40201788989709 -8.267430594683143 2.317517980142772 1.008211001941669 0.8868810292590213 0.6635603935115386 0.03358435007400652 0.10452352434378448 1.1025431186974888 0.0052168397717894666 0.006663086815098364 5.4021844106580735e-09 8.267430594683143 -0.12132997268264767 SKLFPELEERS(ph)LETAR ddPTM_A549_PD325901_60min_R1 2 SKLFPELEERSLETAR 16 2 Q9H6A9 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 SKLFPELEERS(0.993)LET(0.007)AR;SKLFPELEERS(0.773)LET(0.227)AR 77.847 8.1999e-05 11808600.0 4454.8 4300.8 3905.4 4021.3999999999996 4344.9 4698.4 4687.799999999999 4629.2 4287.4 4118.1 4447.0 True False 4907.048016549569 4663.243509658913 4170.443929078003 4269.792744737957 4039.7292130912724 4660.137788149552 4866.196794262588 4536.866974462851 4107.215487835118 3858.0824632006597 3900.047191855623 1.2582022152954564 1.1956889956093493 1.06933165777764 1.0948054048306044 1.0358154694967137 1.1948926663967574 1.2477276696611652 1.1632851479174622 1.0531194331217633 0.9892399433671989 1.0 11.929275865827783 -8.888365651092222 3.242200891440985 1.021881290062367 1.1539807126803028 0.4765645570690996 0.067184533786925 0.17812156509570726 3.5291346061627404 0.013102622795340009 0.013727714794178343 1.2931066612168202e-09 8.888365651092222 0.13209942261793572 SKLS(ph)PS(ph)PSLR ddPTM_A549_MK2206_60min_R1 1 SKLSPSPSLR 10 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.018)KLS(0.808)PS(0.904)PS(0.27)LR 52.071000000000005 0.0069581 5506600.0 1037.6 1079.0 946.55 1074.0 1653.3 1064.3 957.82 1278.0 1865.3 1789.4 1720.8 True False 1212.7215131155754 1133.9164912183733 1080.78502316568 1337.130048213692 1410.101760113266 1176.9235195748374 1131.8434957771008 1459.1604137108548 1442.8125282720196 1385.1732972077275 1293.4778683360644 0.9375664963449476 0.8766415869774784 0.8355651454292037 1.0337479140124615 1.0901630361308208 0.9098907282339798 0.8750389345533288 1.12809074622044 1.115452041037285 1.07089060517875 1.0 10.337039654096444 -6.597124092545184 0.5798986167239062 1.0519840576308535 0.867405790858096 0.30645788615590075 0.08420299853742005 1.2034357477629918 0.6021210957878245 0.018533583808078947 0.11277626484085909 2.528575394151917e-07 6.597124092545184 -0.18457826677275746 SKLS(ph)PSPSLR ddPTM_A549_MK2206_60min_R1 1 SKLSPSPSLR 10 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.005)KLS(0.497)PS(0.497)PS(0.002)LR 70.622 0.00084351 99403000.0 1593.6 1901.8 1286.1 1557.1 1953.1 1490.3 1766.9 1868.1 2229.8 2376.1 2428.0 True False 1862.5607202206816 1998.593496755426 1468.4883189407647 1938.5895699008747 1665.8015772559247 1648.0025568189226 2087.922858875948 2132.9088958163125 1724.7538602589123 1839.3373597268812 1825.0605906089982 1.020547334047233 1.0950833671163336 0.8046244198669316 1.06220559463946 0.9127376843417945 0.9029851202194916 1.1440293377762523 1.1686784026740666 0.9450392327431634 1.0078226274740385 1.0 10.833728645816427 -6.3867219187854465 17.424807081160036 0.9948224421191347 0.976965472793907 1.6114648279441646e-05 0.10463707297318776 15.690458746483849 2118.374629392265 0.014849916676643198 0.03450832081579037 4.10466843103221e-07 6.3867219187854465 -0.017856969325227734 SKLSPS(ph)PS(ph)LR ddPTM_A549_PD325901_60min_R1 1 SKLSPSPSLR 10 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.007)KLS(0.443)PS(0.816)PS(0.735)LR 57.802 0.0036275999999999995 17709000.0 2130.6 2478.4 2294.8 2121.5 2555.1 2623.2 2725.7 2866.1 2777.7 2719.6 2709.7 True False 2346.8969435351783 2687.263465945558 2450.5389277534205 2252.540236723919 2375.6385906164733 2601.837528919187 2829.4280050602715 2808.933387088047 2660.9629287119487 2547.88399187016 2376.424078203549 0.9875749724389715 1.1308013121870855 1.031187552015505 0.9478696405174957 0.9996694665761552 1.0948540510017213 1.190624194987609 1.1820000532949708 1.1197340378420573 1.0721503856316024 1.0 11.214576595938828 -7.267243844799982 24.420454357627833 1.0818806635221074 1.0222870742614 0.2625671310366753 0.06698599351546139 627.7690585117639 2641133.6716858787 0.012372620044284986 0.020111437892783236 5.4045078899762545e-08 7.267243844799982 -0.05959358926070735 SKLSPS(ph)PSLR ddPTM_A549_PD325901_60min_R1 2 SKLSPSPSLR 10 1 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.002)KLS(0.344)PS(0.652)PS(0.002)LR;S(0.019)KLS(0.386)PS(0.589)PS(0.006)LR 97.463 0.00014357 303370000.0 5729.3 5299.6 5169.4 5090.4 6898.9 6102.3 5545.8 5984.700000000001 5615.1 5689.9 5843.1 True False 6310.934318312258 5746.215890947816 5520.226570127472 5404.822446862802 6414.345063912956 6052.604892011117 5756.848453778204 5865.330463593676 5379.116874036242 5330.638742955589 5124.435742462691 1.2315374092834974 1.1213363148127427 1.0772359821755852 1.0547156249958876 1.2517173375327295 1.1811261173317724 1.1234111896603838 1.144580741834988 1.0496993511818642 1.040239162096274 1.0 12.323177441208504 -8.903785049328869 1.5751325737820259 1.0167216249745865 1.1478258602757387 0.45942147441384373 0.05684768704936119 0.21627537498179866 1.0680690020246555 0.011714313972990062 0.01192091671679516 1.2480010498071436e-09 8.903785049328869 0.13110423530115223 SKLSPS(ph)PSLRK ddPTM_A549_PD325901_60min_R1 1 SKLSPSPSLRK 11 2 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.035)KLS(0.379)PS(0.556)PS(0.03)LRK 48.467 0.006208399999999999 7785700.0 5448.0 5801.2 6137.7 5525.9 6895.1 7379.6 5889.4 7149.8 7776.5 7340.2 8372.8 True False 6001.076949394378 6290.087483313171 6554.241230988391 5867.2222927705425 6410.811962803669 7319.50298429858 6113.524339803342 7007.191630090405 7449.680748507206 6876.738519313635 7342.9986795522245 0.8172515359570136 0.8566101885363188 0.8925837409231385 0.799022653934118 0.8730509486070887 0.9968002588208177 0.8325650877246439 0.9542684039428021 1.014528406392344 0.9365027585341985 1.0 12.842153625203627 -7.996588241567382 0.701600801342553 1.0103780312199577 0.8449053669772238 0.4759604343133409 0.053700833419227614 0.28566497197844637 0.28619824152819107 0.010864576158827768 0.017631381663492162 1.0078868023708146e-08 7.996588241567382 -0.16547266424273388 SKNSVEGDS(ph)TSDAEGDAGPAGQDKSEVPETPEIPNELSSNIR ddPTM_A549_MK2206_60min_R1 1 SKNSVEGDSTSDAEGDAGPAGQDKSEVPETPEIPNELSSNIR 42 2 Q8TDR0-2 Q8TDR0-2 TRAF3IP1 TRAF3-interacting protein 1 1 S(0.072)KNS(0.066)VEGDS(0.287)T(0.287)S(0.287)DAEGDAGPAGQDKS(0.001)EVPETPEIPNELSSNIR 53.773 0.00062213 4721100.0 430.88 706.59 416.42 435.54 1001.9 521.43 406.42 397.0 791.56 775.87 767.78 True False 503.6020099954115 742.5524129100933 475.4746176606118 542.2473195521338 854.5218372089047 576.607376502779 480.26125321430897 453.2759657615092 612.2729238615767 600.6004281348823 577.1190363499908 0.8726137560466897 1.2866538203390268 0.8238761636901936 0.939576214608334 1.48066825626366 0.999113424068546 0.8321701814789161 0.7854115653995208 1.060912715224086 1.0406872591370413 1.0 9.172725109061068 -7.482414328358679 24.999558913066473 0.9905621734209606 1.0870025575549507 0.08105504453337509 0.19223363712402922 1339.1120825830083 827325.430145852 0.028410998956243327 0.04541445635939122 3.292954057946644e-08 7.482414328358679 0.09644038413399003 SKPAGS(ph)DGER ddPTM_A549_MK2206_60min_R1 4 SKPAGSDGER 10 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.013)KPAGS(0.987)DGER;S(0.021)KPAGS(0.979)DGER;S(0.001)KPAGS(0.999)DGER;S(0.073)KPAGS(0.927)DGER 67.115 0.001322 133498900.0 9015.17 7027.54 4654.950000000001 3432.52 4437.79 3244.02 3180.88 3692.3600000000006 4449.84 10504.09 11478.9 True False 10536.710296254947 7385.211768949739 5315.0919059585685 4273.48755409168 3784.9969697048655 3587.300043193801 3758.804722022368 4215.763337378256 3441.958344934307 8131.208773592667 8628.372328476786 1.2211700996583037 0.8559217761820312 0.6160016864845784 0.4952831648198128 0.4386687112716486 0.41575628712201 0.4356331158330914 0.488593117784764 0.39891166188721194 0.9423803776706184 1.0 13.074872717170802 -5.391548747183668 2.2656573813748384 0.6186203680581769 1.28714572454496 0.47320971546386126 0.19985323620242018 0.41701050163584197 3.0058853776069965 0.03624254025559654 0.4920301924080203 4.059300972579438e-06 5.391548747183668 0.6685253564867831 SKPAGS(ph)DGER ddPTM_A549_PD325901_60min_R1 7 SKPAGSDGER 10 1 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 SKPAGS(1)DGER;SKPAGS(1)DGER;SKPAGS(1)DGER;S(0.005)KPAGS(0.995)DGER;S(0.006)KPAGS(0.994)DGER;S(0.02)KPAGS(0.98)DGER;S(0.016)KPAGS(0.984)DGER 103.88 0.00019715 236116700.0 31052.690000000002 29045.81 23947.46 22869.75 25581.27 20960.87 16385.41 20337.609999999997 24416.77 32533.91 39384.53 True False 34205.136229017866 31493.60234497906 25572.678643375395 24282.36251652928 23784.529845790556 20790.17162427429 17008.965743990393 19931.96041400359 23390.6180685049 30479.71337032817 34540.48248910581 0.990291210894529 0.9117881417815241 0.7403683098937923 0.7030116769268647 0.6885986567585523 0.6019073888395041 0.49243567310778247 0.577060856642353 0.6771943060112836 0.8824344992847618 1.0 15.076000615276115 -5.628799786655981 3.7242255859943367 0.7610521666458497 0.9758907161615539 0.2506453017692729 0.14139672570477183 0.3395410756208247 8.627159943130291 0.026175580703194257 0.12242516764995769 2.350716270710352e-06 5.628799786655981 0.21483854951570414 SKPAGS(ph)DGERR ddPTM_A549_MK2206_60min_R1 4 SKPAGSDGERR 11 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.054)KPAGS(0.946)DGERR;S(0.001)KPAGS(0.999)DGERR;S(0.007)KPAGS(0.993)DGERR;S(0.007)KPAGS(0.993)DGERR 59.306000000000004 0.0030948 376264000.0 13385.4 11914.8 8148.74 5746.4400000000005 6493.889999999999 5194.34 5159.9 5511.49 7940.63 17354.800000000003 17332.6 True False 15644.528278389758 12521.212427774492 9304.353863685063 7154.318057967499 5538.647383404067 5744.001611076165 6097.387039172561 6292.760585730227 6142.08998358047 13434.338626567944 13028.437064575593 1.2007985455851289 0.9610678829481205 0.7141573327305439 0.54913095273877 0.42511986326154855 0.4408818634657371 0.468006024740404 0.48300195599365364 0.47143720717513027 1.0311550464557255 1.0 13.669376403253679 -5.5785960119172255 2.2157565000875894 0.6494540781521272 1.2047014320398943 0.4427883101961395 0.20594038620381103 0.33444586571113216 2.7986566560428616 0.035075819711887314 0.27941340923842783 2.638784886899607e-06 5.5785960119172255 0.5552473538877671 SKPAGS(ph)DGERR ddPTM_A549_PD325901_60min_R1 5 SKPAGSDGERR 11 2 H3BQZ7;Q1KMD3 H3BQZ7 HNRNPUL2-BSCL2;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.006)KPAGS(0.994)DGERR;SKPAGS(1)DGERR;SKPAGS(1)DGERR;S(0.002)KPAGS(0.998)DGERR;S(0.001)KPAGS(0.999)DGERR 93.823 5.9442e-05 453627000.0 20646.5 19403.4 15094.7 14248.800000000001 14961.400000000001 12858.2 10251.5 12780.699999999999 15188.2 19622.8 23111.899999999998 True False 22742.51748085004 21038.59261423823 16119.117113804916 15128.916014627286 13910.562878027982 12753.48708232263 10641.626442336043 12525.778912234806 14549.892772388244 18383.813059152002 20269.28281840521 1.1220188540760332 1.0379544655193456 0.7952485175828816 0.746396216884877 0.6862878673436196 0.629202680557697 0.5250124800998425 0.6179685302363518 0.7178296786690667 0.9069789604227568 1.0 14.307007422837005 -5.700017726845932 3.550581368036051 0.7846947361317743 1.104973000644995 0.4708958859592617 0.13381019101492592 0.2151409101591434 5.306446752583539 0.024527786532033326 0.10914100252156496 1.9951808748694038e-06 5.700017726845932 0.3202782645132206 SKPAPSESAGYGIPLKDGDEKTDEEAEGPYS(ph)DNEMLTHK ddPTM_A549_PD325901_60min_R1 2 SKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHK 39 3 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 SKPAPSESAGYGIPLKDGDEKT(0.016)DEEAEGPY(0.051)S(0.929)DNEMLT(0.005)HK;SKPAPSES(0.001)AGY(0.003)GIPLKDGDEKT(0.018)DEEAEGPY(0.4)S(0.568)DNEMLT(0.009)HK 81.433 1.1692e-06 14224300.0 2819.2 3028.5 2429.5 2609.94 3704.3 3074.1000000000004 2797.0 2654.6 3815.3999999999996 3135.8999999999996 3039.0 True False 3105.4031086146506 3283.722323521673 2594.38047977032 2771.150066196194 3444.12274714125 3049.0655488146076 2903.4413655771286 2601.6519205065856 3655.0520064109032 2937.8987388239566 2665.2222658082396 1.1651572735427844 1.2320632187596823 0.9734199331340059 1.0397444527411044 1.292245975626654 1.144019239194659 1.089380575430788 0.9761482011773693 1.3713873147846052 1.1023090931341244 1.0 11.38004013599857 SKPCGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SKPCGSPR 8 1 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 SKPCGS(1)PR;S(0.001)KPCGS(0.999)PR 76.332 0.001303 83096000.0 15400.6 15444.5 12181.9 11459.599999999999 11060.8 8397.1 6612.9 8635.3 7530.5 12652.5 16486.8 True False 16964.057574677507 16746.062217477465 13008.636989715606 12167.433465360098 10283.927565688504 8328.716801649627 6864.55752821773 8463.062167238202 7214.019273019167 11853.618990710842 14459.028118436081 1.1732501960520687 1.15817343187301 0.8996895837783768 0.8415111559155162 0.711246114292835 0.5760218967297007 0.47475926265507634 0.585313348719982 0.4989283659958364 0.8198074513456963 1.0 13.819682962555323 -5.986671490030783 1.4224046129642856 0.7067029517896565 1.2063713407876782 0.617189416463565 0.14687497110623338 0.37368286723116884 1.3070892281530164 0.03100788715707916 0.17977874003575703 1.0311658221890947e-06 5.986671490030783 0.4996683889980217 SKPDEKDPEKS(ph)PTK ddPTM_A549_MK2206_60min_R1 3 SKPDEKDPEKSPTK 14 3 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;A0A494C150;V9GYT9 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 SKPDEKDPEKS(0.992)PT(0.008)K;S(0.001)KPDEKDPEKS(0.98)PT(0.019)K;S(0.001)KPDEKDPEKS(0.939)PT(0.059)K 62.646 0.0017621 37587000.0 3467.0 3429.91 3316.8 2492.74 3380.59 3296.4 3281.46 3285.94 4421.44 4076.45 3741.63 True False 4052.1448399881433 3604.4777686698926 3787.1721143478185 3103.4614119033495 2883.3096892404938 3645.2228600267736 3877.658806093761 3751.732057769204 3419.990899588826 3155.577113782518 2812.480007265383 1.4407728515475227 1.2816012058249548 1.3465596571582898 1.1034607904362996 1.0251840659461184 1.2960884524015086 1.378732931817022 1.3339586585780108 1.2160054083065768 1.1219909494932672 1.0 11.457627125517414 -10.167615508358777 0.7365143712640652 1.0054910666531582 1.2670324994548618 0.2988722930761437 0.11859850003999432 0.5091448983909422 0.5338455264544734 0.06913564780191099 0.025378661158133753 6.798052146424729e-11 10.167615508358777 0.2615414328017036 SKPDEKDPEKS(ph)PTK ddPTM_A549_PD325901_60min_R1 6 SKPDEKDPEKSPTK 14 3 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;A0A494C150;V9GYT9 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 SKPDEKDPEKS(0.5)PT(0.5)K;SKPDEKDPEKS(0.928)PT(0.072)K;SKPDEKDPEKS(0.965)PT(0.035)K;S(0.002)KPDEKDPEKS(0.985)PT(0.013)K;S(0.001)KPDEKDPEKS(0.906)PT(0.092)K;S(0.003)KPDEKDPEKS(0.962)PT(0.035)K 88.264 2.2705e-05 60547300.0 13025.76 11365.93 12954.519999999999 12213.909999999998 15357.810000000001 13623.929999999998 13155.11 14881.43 15403.149999999998 13952.619999999999 15533.43 True False 14348.125566142302 12323.776809834808 13833.691629057086 12968.335480897782 14279.130407168248 13512.981231079591 13655.734909802404 14584.608204394002 14755.80917139701 13071.649192030975 13622.916584525712 1.053234487425428 0.9046357094950872 1.015472093895869 0.9519500028083949 1.0481698481063835 0.9919301162299565 1.0024090527951974 1.0705936657470747 1.0831607959897627 0.9595338201570637 1.0 13.73374798830129 -7.35095885168027 1.0483867244658824 1.0409120360523525 0.9809107270690289 0.04064327056945494 0.050985906312200346 0.5794121835816879 1.2614530394697925 0.008085316300742596 0.01712823608970346 4.456984752167023e-08 7.35095885168027 -0.060001308983323565 SKPDEKDPEKSPT(ph)K ddPTM_A549_MK2206_60min_R1 1 SKPDEKDPEKSPTK 14 3 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;A0A494C150;V9GYT9 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 S(0.006)KPDEKDPEKS(0.381)PT(0.613)K 54.368 0.004324000000000001 17156000.0 1513.9 1526.9 2151.3 1500.0 2515.7 1801.4 1861.6 1797.1 2511.8 2597.8 2573.5 True False 1769.4093086986009 1604.6126880827953 2456.3866888556627 1867.5000673375587 2145.6438625276396 1992.0229523274572 2199.828623059291 2051.844428387931 1942.8813105203758 2010.9551757495442 1934.428925013285 0.9146933680628505 0.829502013402625 1.2698252476961867 0.9654012319551795 1.1091872308065824 1.0297731421245042 1.1371979578128897 1.0606977603862286 1.0043694474362932 1.03956012534073 1.0 10.917692006767279 SKPDEKDPEKSPT(ph)K ddPTM_A549_PD325901_60min_R1 1 SKPDEKDPEKSPTK 14 3 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;A0A494C150;V9GYT9 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 SKPDEKDPEKS(0.318)PT(0.682)K 93.152 1.4020999999999998e-05 26987000.0 4906.3 4536.1 4923.0 4326.7 5564.9 4518.9 4547.3 4853.3 5463.0 5061.1 5513.6 True False 5404.383964172837 4918.3730664443365 5257.104384403907 4593.9504323513465 5174.040621862792 4482.099576636522 4720.349989878039 4756.497124159807 5233.409108094239 4741.541282267268 4835.462153590098 1.1176561396846716 1.017146429900745 1.0871979176800628 0.95005405614447 1.0700198776287217 0.9269226878983592 0.9761941754364485 0.983669600356263 1.0822976050404374 0.9805766505166216 1.0 12.239438067813861 -2.5880984522355734 1.2152888446573222 1.0222565322932657 81.10048857916439 0.22190729776015927 0.052603760292268785 1542.3743366299234 3.39886497534866 0.007910734504120262 343788.23497144773 0.0025816748724112244 2.5880984522355734 80.07823204687112 SKPDPEVGPLLGVQPLPGS(ph)PTADR ddPTM_A549_MK2206_60min_R1 2 SKPDPEVGPLLGVQPLPGSPTADR 24 1 A0A6E1W9L1;Q9H5J0 A0A6E1W9L1 ZBTB3 Zinc finger and BTB domain-containing protein 3 1 SKPDPEVGPLLGVQPLPGS(0.842)PT(0.158)ADR;SKPDPEVGPLLGVQPLPGS(0.798)PT(0.202)ADR 86.675 1.8934999999999998e-07 14637000.0 1672.54 1601.75 1745.57 1341.47 1633.85 2023.54 1935.06 1951.6599999999999 2716.6000000000004 2240.1 2634.0 True False 1954.82386232298 1683.2722333725958 1993.1180739393737 1670.1302102208776 1393.5128293480068 2237.66965968286 2286.635354177651 2228.3137817080787 2101.2944375187735 1734.0598541829827 1979.90510529823 0.9873320984383885 0.8501782377691517 1.006673536325446 0.8435405342163147 0.7038280903559285 1.130190357959506 1.154921691983424 1.1254649405898831 1.0613106819593048 0.8758297807014261 1.0 10.95121556981726 -7.285176271357927 24.99947787024779 1.05449395599126 0.8819471805181323 0.4296267753309251 0.10298408007492958 548.1309066587289 577285.0672289896 0.013937560115850267 0.022287925093293384 5.1858951119972445e-08 7.285176271357927 -0.1725467754731278 SKPDPEVGPLLGVQPLPGS(ph)PTADR ddPTM_A549_PD325901_60min_R1 2 SKPDPEVGPLLGVQPLPGSPTADR 24 1 A0A6E1W9L1;Q9H5J0 A0A6E1W9L1 ZBTB3 Zinc finger and BTB domain-containing protein 3 1 SKPDPEVGPLLGVQPLPGS(0.841)PT(0.159)ADR;SKPDPEVGPLLGVQPLPGS(0.5)PT(0.5)ADR 82.492 3.3644999999999997e-06 26241000.0 2655.5 2656.9 2539.1 2522.5 2323.42 3333.7 3041.4 3160.1000000000004 2794.6000000000004 3077.2 2652.7 True False 2925.084405124223 2880.8062873913605 2711.418594848661 2678.309095986843 2160.2309945638626 3306.551452484711 3157.1421413179405 3097.0693264495103 2677.152680483283 2882.905066841764 2326.434716850776 1.257324946166476 1.238292339142454 1.1654823473916456 1.1512504849533833 0.9285586132793365 1.421295611063047 1.3570731722881386 1.3312513366555665 1.150753408678178 1.2391944832839603 1.0 11.183904988199503 -9.717536814195995 1.0953073127588802 1.0275445736180473 1.2232872148647866 0.003999762914172034 0.14007053814190687 0.4137392877351554 1.0192862925678807 0.03877141691804207 0.025615523398240764 1.9162986153963255e-10 9.717536814195995 0.19574264124673935 SKPELPPGLSPEAT(ph)APVTPSRPEGGEPGLSK ddPTM_A549_MK2206_60min_R1 1 SKPELPPGLSPEATAPVTPSRPEGGEPGLSK 31 2 Q9BRP8;Q9BRP8-2 Q9BRP8 WIBG Partner of Y14 and mago 1 SKPELPPGLSPEAT(0.848)APVT(0.119)PS(0.024)RPEGGEPGLS(0.008)K 90.24600000000001 1.5704e-09 11559000.0 681.07 462.72 835.36 1021.7 1275.1 547.98 580.21 746.55 1206.9 791.01 1239.8 True False 796.0179654371866 486.27047156308265 953.8266092141798 1272.0165458658553 1087.5344791147559 605.9668798803152 685.6266466401116 852.3757487134878 933.5390770232676 612.320291619696 931.9234432607229 0.8541666927617849 0.5217922942915381 1.023503181631336 1.3649367392402694 1.1669783467508477 0.6502324673366809 0.7357113415251803 0.9146413848449779 1.0017336550273825 0.6570499927303449 1.0 9.86406763331889 -5.7778680975019086 24.98639199710851 0.9905286292256631 0.6879794796845362 0.1479243090179524 0.21858120778208012 209.74965186451556 319008.95154925133 0.027474030322778023 0.08577122356685524 1.6677536603200507e-06 5.7778680975019086 -0.3025491495411269 SKPELPPGLSPEATAPVT(ph)PSRPEGGEPGLSK ddPTM_A549_MK2206_60min_R1 1 SKPELPPGLSPEATAPVTPSRPEGGEPGLSK 31 2 Q9BRP8;Q9BRP8-2 Q9BRP8 WIBG Partner of Y14 and mago 1 SKPELPPGLSPEAT(0.006)APVT(0.836)PS(0.156)RPEGGEPGLS(0.002)K 108.45 5.610100000000001e-15 13327000.0 1050.7 1185.1 1509.9 1122.2 1437.1 1260.6 1076.6 1290.9 1845.1 1719.4 1814.8 True False 1228.032472851324 1245.4165280286331 1724.0265241961429 1397.1390503774728 1225.7044937148592 1393.995855281444 1272.2042842638778 1473.8890282154478 1427.1877960192476 1330.9863458248385 1364.135074068044 0.9002279145196063 0.912971561030701 1.2638239108205402 1.0241940676820267 0.8985213539445436 1.0218899006271795 0.9326087338770525 1.0804568082983907 1.0462217584972515 0.9756998197074785 1.0 10.413770789024127 -8.279795994662477 24.697792613162438 1.0268340449099345 0.9993889543412817 0.02122574340247252 0.0998035539968475 3325.071641551671 4473686.23200041 0.016349401578277946 0.01978404294963627 5.250540410318316e-09 8.279795994662477 -0.02744509056865274 SKPELPPGLSPEATAPVT(ph)PSRPEGGEPGLSK ddPTM_A549_PD325901_60min_R1 2 SKPELPPGLSPEATAPVTPSRPEGGEPGLSK 31 2 Q9BRP8;Q9BRP8-2 Q9BRP8 WIBG Partner of Y14 and mago 1 SKPELPPGLSPEATAPVT(0.97)PS(0.03)RPEGGEPGLSK;SKPELPPGLSPEAT(0.148)APVT(0.701)PS(0.137)RPEGGEPGLS(0.014)K 229.26 2.4127999999999996e-105 68124000.0 8636.4 9107.5 10770.3 10188.9 11196.400000000001 10594.3 11165.7 10886.5 11107.2 11303.2 12403.0 True False 9513.160970218354 9875.020987774027 11501.237325075233 10818.245212329171 10410.00348948311 10508.02353332897 11590.616823605478 10669.360217205962 10640.403010328457 10589.514022983825 10877.509629094959 0.8745715972314775 0.9078384046069246 1.0573410382751527 0.994551655775393 0.9570208480108928 0.9660321058436303 1.06555794651775 0.9808642401628179 0.9782021228340453 0.9735237553510586 1.0 13.409060673545005 -5.601729354773443 6.840115982112453 0.9938450527798439 0.8826578232822678 0.6038567348396782 0.03338594480944388 0.08949803724430566 6.202001238803533 0.00432344364757394 0.017123599435366607 2.5019040216958793e-06 5.601729354773443 -0.11118722949757609 SKPIPIMPAS(ph)PQK ddPTM_A549_MK2206_60min_R1 7 SKPIPIMPASPQK 13 1 O00429-3;O00429-7;O00429-4;O00429-5;O00429-9;O00429-2;O00429;O00429-8;O00429-6 O00429-3 DNM1L Dynamin-1-like protein 1 SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK 133.93 7.8226e-09 547458500.0 53113.869999999995 54014.600000000006 53546.9 47047.78 68115.40000000001 52716.799999999996 50764.7 52938.0 75346.0 69537.9 84669.00000000001 True False 62078.19274655353 56763.71242498976 61140.655598700876 58574.48821205507 58095.71489192475 58295.25678542024 59987.988881079735 60442.123615825665 58280.251302837925 53829.240093831024 63643.350554478326 0.9754073631528083 0.8919032692409926 0.9606762539373983 0.920355193460716 0.9128324386723663 0.9159677527587089 0.9425649083281745 0.9497005278514928 0.9157319782048619 0.8457951950181114 1.0 15.957722169038139 -10.839255126079935 0.864512988875776 1.0043425009666058 0.9297389805918188 0.0 0.051234559229403134 0.38477162673846804 0.4596012050568856 0.019704726828224765 0.003833993900001457 1.4479210231658898e-11 10.839255126079935 -0.07460352037478701 SKPIPIMPAS(ph)PQK ddPTM_A549_PD325901_60min_R1 6 SKPIPIMPASPQK 13 1 O00429-3;O00429-7;O00429-4;O00429-5;O00429-9;O00429-2;O00429;O00429-8;O00429-6 O00429-3 DNM1L Dynamin-1-like protein 1 SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK 138.75 2.1345e-09 973477800.0 52585.7 46500.5 48557.0 45065.399999999994 54301.3 47333.6 45618.11 47740.5 52607.4 51558.6 57259.1 True False 57924.161552453676 50419.26032851895 51852.37001696127 47848.98740705072 50487.364017315274 46948.130855005074 47354.132139237656 46788.278275802266 50396.49392516148 48303.181196954254 50216.59369534075 1.1534864730944117 1.0040358498708166 1.032574418160352 0.9528521129359337 1.0053920487641448 0.9349126931992814 0.942997695672682 0.931729431105229 1.0035824857200024 0.9618968082543594 1.0 15.615876550223607 -4.028642024117742 1.1898290842125285 0.9862142721369827 3.5590594603065386 0.6990919876529014 0.033064828996126054 11.49973502714917 1.2411475046178666 0.005133340982813878 69.46587234644004 9.3617701877165e-05 4.028642024117742 2.572845188169556 SKPIPIMPAS(ph)PQKGHAVNLLDVPVPVAR ddPTM_A549_MK2206_60min_R1 4 SKPIPIMPASPQKGHAVNLLDVPVPVAR 28 2 O00429-3;O00429-7;O00429-4;O00429-5;O00429-9;O00429-2;O00429;O00429-8;O00429-6 O00429-3 DNM1L Dynamin-1-like protein 1 S(0.008)KPIPIMPAS(0.992)PQKGHAVNLLDVPVPVAR;SKPIPIMPAS(1)PQKGHAVNLLDVPVPVAR;S(0.007)KPIPIMPAS(0.993)PQKGHAVNLLDVPVPVAR;SKPIPIMPAS(1)PQKGHAVNLLDVPVPVAR 94.18799999999999 4.3687e-10 32816700.0 3776.98 4165.05 4368.32 4418.54 5788.68 4090.33 4057.87 4114.75 6640.789999999999 6475.52 6131.719999999999 True False 4414.441885704763 4377.033254633075 4987.813461935559 5501.082498355795 4937.172840218026 4523.166005658689 4795.132453079935 4698.028413393378 5136.661668162516 5012.695534556043 4609.044697137152 0.9577780593984554 0.9496617069805836 1.0821794514237786 1.1935407139298781 1.0711922241250311 0.9813673554670004 1.0403744741417607 1.0193063253023988 1.1144742578333178 1.087577982845255 1.0 12.170252043229562 -5.754977668306048 24.943317265677685 1.0588366570394587 0.9537198279758808 0.3699514582239427 0.055729886263850684 138.51234452904131 534664.8467107267 0.00867064859973459 0.032027282921048984 1.7580140098147564e-06 5.754977668306048 -0.10511682906357789 SKPIPIMPAS(ph)PQKGHAVNLLDVPVPVAR ddPTM_A549_PD325901_60min_R1 8 SKPIPIMPASPQKGHAVNLLDVPVPVAR 28 2 O00429-3;O00429-7;O00429-4;O00429-5;O00429-9;O00429-2;O00429;O00429-8;O00429-6 O00429-3 DNM1L Dynamin-1-like protein 1 S(0.005)KPIPIMPAS(0.995)PQKGHAVNLLDVPVPVAR;SKPIPIMPAS(1)PQKGHAVNLLDVPVPVAR;S(0.038)KPIPIMPAS(0.962)PQKGHAVNLLDVPVPVAR;SKPIPIMPAS(1)PQKGHAVNLLDVPVPVAR;S(0.022)KPIPIMPAS(0.978)PQKGHAVNLLDVPVPVAR;S(0.011)KPIPIMPAS(0.989)PQKGHAVNLLDVPVPVAR;S(0.04)KPIPIMPAS(0.96)PQKGHAVNLLDVPVPVAR;S(0.003)KPIPIMPAS(0.997)PQKGHAVNLLDVPVPVAR 155.79 4.6343e-46 69098400.0 11424.52 11605.69 13165.07 12848.4 15310.52 15899.22 15157.73 16490.66 15130.7 13533.69 14565.73 True False 12584.328860112895 12583.742226472597 14058.530818197103 13642.016487166438 14235.161893626599 15769.742023689596 15734.565709778113 16161.7408496275 14494.809297426602 12679.170503726022 12774.237549770001 0.9851334618667299 0.9850875386843864 1.1005377630894475 1.0679319555484594 1.1143648956084193 1.2344957546193063 1.2317420627629876 1.2651824256954178 1.1346907587206705 0.9925579083938602 1.0 13.640949563785364 -5.768660128753264 5.856532130916659 1.1065362556345373 0.9837567422512148 0.2580406431187078 0.08734209427992719 0.19576396213815464 23.55016446897209 0.014166730172135693 0.049900220062078116 1.7034911091654244e-06 5.768660128753264 -0.12277951338332249 SKPIPIMPASPQK ddPTM_A549_MK2206_60min_R1 1 SKPIPIMPASPQK 13 1 O00429-3;O00429-7;O00429-4;O00429-5;O00429-9;O00429-2;O00429;O00429-8;O00429-6 O00429-3 DNM1L Dynamin-1-like protein 0 47.037 0.035795 2049300.0 2188.9 2413.0 3015.2 2745.2 2767.4 3018.9 2524.4 2959.3 4143.3 3737.0 3133.5 False True 2558.332806533038 2535.811393243684 3442.8006992226065 3417.7741232367102 2360.319125952613 3338.3579942163665 2983.0508036371293 3378.7898374761585 3204.8491654905156 2892.8091045407828 2355.3654697995453 1.0861723326319996 1.0766105836897981 1.4616842877957312 1.4510589405590555 1.0021031369511795 1.417341825300886 1.2664916939157658 1.4345076722907517 1.3606589748313098 1.2281784468832249 1.0 11.20173521734901 -10.800982212705001 1.0615603938157352 1.0009102045361642 1.2910237754254126 0.07809137544028444 0.16905893955301418 0.4955033619444082 0.9963262941879527 0.10578680887292685 0.026778612856943232 1.581312803393571e-11 10.800982212705001 0.2901135708892484 SKPLAAS(ph)PK ddPTM_A549_MK2206_60min_R1 4 SKPLAASPK 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.001)KPLAAS(0.999)PK;S(0.001)KPLAAS(0.999)PK;S(0.009)KPLAAS(0.991)PK;S(0.003)KPLAAS(0.997)PK 56.783 0.0059103 116633400.0 7290.9800000000005 12298.56 8519.689999999999 7731.339999999999 9731.68 8013.06 7695.14 8547.83 15242.400000000001 10529.699999999999 17859.699999999997 True False 8521.519176653237 12924.504172603009 9727.910151618411 9625.518647073042 8300.162763478547 8860.996690561264 9093.247330494461 9759.511079131496 11790.020737111148 8151.033456805749 13424.643587355647 0.6347668838433411 0.9627446783597512 0.7246307947259694 0.7170036645247766 0.6182780726704933 0.6600545208445776 0.6773548415884333 0.7269847438127705 0.8782371509822345 0.6071694495102286 1.0 13.712596165966456 -9.037360339363282 1.3959064788563365 0.9620119763397629 0.7153370077648088 0.0 0.13916578068884602 0.19462863052344528 0.7725234153085998 0.01987347685284386 0.01903775947042016 9.175709608785695e-10 9.037360339363282 -0.24667496857495408 SKPLAAS(ph)PK ddPTM_A549_PD325901_60min_R1 4 SKPLAASPK 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.002)KPLAAS(0.998)PK;S(0.001)KPLAAS(0.999)PK;S(0.004)KPLAAS(0.996)PK;SKPLAAS(1)PK 72.652 0.0021208999999999998 192767700.0 10501.0 18398.9 9853.839999999998 10964.8 11607.6 11089.1 9912.05 10648.099999999999 15327.2 10685.1 18214.5 True False 11567.053789572386 19949.439873945168 10522.580838353562 11642.070793132427 10792.322220046095 10998.794046179384 10289.258486831885 10435.715292227153 14683.051085773768 10010.440962469429 15974.231971228735 0.7241070375343154 1.2488512693365288 0.6587221756454916 0.7288031633759304 0.6756082069851118 0.6885335123459685 0.6441160054119608 0.6532843213384512 0.9191710194405265 0.6266618001102827 1.0 13.963458948722609 -8.916844689706329 5.583718404171103 0.965112899890684 0.7572685596021091 0.0 0.19173253781413502 0.21873476142544235 10.974480425552715 0.029226675075029192 0.030821975627304717 1.2110311392242605e-09 8.916844689706329 -0.2078443402885749 SKPLAAS(ph)PKPAGLK ddPTM_A549_MK2206_60min_R1 4 SKPLAASPKPAGLK 14 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SKPLAAS(1)PKPAGLK;S(0.001)KPLAAS(0.999)PKPAGLK;SKPLAAS(1)PKPAGLK;S(0.004)KPLAAS(0.996)PKPAGLK 99.021 1.1987e-05 570298000.0 42010.0 45325.9 41374.9 42164.7 61246.7 49068.8 45357.7 48557.2 66335.3 68785.0 66722.5 True False 49100.26095411073 47632.79470742808 47242.48296970862 52495.05339284531 52237.39156301291 54261.22784676667 53598.60697042141 55440.3318001883 51310.46046570677 53246.420726742705 50153.46180268072 0.9790004356486176 0.9497409150903735 0.9419585662017749 1.0466885336724538 1.0415510651793294 1.081903938361168 1.068692071173371 1.1054138599307015 1.023069168536721 1.0616698990037945 1.0 15.6140616646978 -6.260840494538251 24.999999970697527 1.0311706142493338 0.9561840637689655 0.5656789937244489 0.03380998114323395 41.396627392488696 1728013.7642405154 0.005660982491360523 0.014061212426394229 5.484783702707814e-07 6.260840494538251 -0.07498655048036829 SKPLAAS(ph)PKPAGLK ddPTM_A549_PD325901_60min_R1 3 SKPLAASPKPAGLK 14 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SKPLAAS(1)PKPAGLK;S(0.001)KPLAAS(0.999)PKPAGLK;SKPLAAS(1)PKPAGLK 142.26 1.9638e-13 404991000.0 26331.1 23844.1 26552.1 25404.6 29557.0 29796.800000000003 27727.700000000004 28842.300000000003 28067.399999999998 29763.1 28349.9 True False 29004.213888068676 25853.52598787624 28354.085176748085 26973.78444396724 27481.01828611449 29554.144739897554 28782.89279667964 28267.017700153378 26887.824785012683 27883.852786597574 24863.042024822957 1.1665593397264593 1.0398376016122401 1.1404109420094175 1.0848947774386153 1.1052958949543574 1.1886777454822728 1.1576577302143138 1.1369090585106976 1.0814374507418765 1.1214980354680122 1.0 14.601715202312857 -9.685776905622316 0.8616304406603638 1.0114950580374475 1.1248283119177913 0.06990735614342392 0.05194884982291331 0.2784079786872348 0.4343269001096639 0.01428639024589174 0.008617251569557638 2.0616887179840307e-10 9.685776905622316 0.11333325388034377 SKPLAASPKPAGLK ddPTM_A549_MK2206_60min_R1 1 SKPLAASPKPAGLK 14 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 0 76.262 0.00026652 4795800.0 1808.5 2028.1 2122.5 2032.1 2740.3 2175.5 1964.0 1917.4 2923.0 2493.6 2938.2 False True 2113.7305864201207 2131.3216272845075 2423.502415793306 2529.9645912244346 2337.2055000534606 2405.7099660199738 2320.8333775722217 2189.1973217912305 2260.945167071846 1930.294028119587 2208.5638498053386 0.9570611176156051 0.9650260405522624 1.0973205126068293 1.145524767802128 1.0582467426782614 1.0892643951552552 1.050833725172482 0.9912311667983631 1.0237173660481331 0.8740041761933764 1.0 11.108892826103306 -8.179062729428841 6.819866554347596 1.0100477237601937 1.055810744737457 0.17704483407194294 0.06609455717448136 0.4088602046393091 28.932807700103954 0.00885838030985001 0.01145371615497829 6.621208601583313e-09 8.179062729428841 0.04576302097726326 SKPNLPS(ph)ESR ddPTM_A549_PD325901_60min_R1 1 SKPNLPSESR 10 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 S(0.003)KPNLPS(0.967)ES(0.03)R 40.025 0.028941 6970400.0 2528.2 2369.6 2172.8 2357.8 2730.7 2505.3 2385.3 2444.0 2565.8 3073.5 3042.5 True False 2784.86100283753 2569.2945081119233 2320.25927410782 2503.435951047683 2538.905052403585 2484.8976674295673 2476.0738967862444 2395.252502719092 2457.96834880985 2879.438685473207 2668.291787996566 1.043686831914469 0.9628986303784366 0.8695672956554503 0.9382167131456556 0.951509525241942 0.9312690908123294 0.927962192112938 0.897672628418768 0.9211767468112498 1.0791318619749515 1.0 11.381700724077366 -10.771194047299975 1.0536126630089668 0.9994923226549897 0.9351115718783722 0.3349383614557141 0.04833964808316457 0.5855435284494928 1.1684170089620143 0.027300544744421968 0.007140674083946691 1.6935809217658842e-11 10.771194047299975 -0.06438075077661742 SKPNLPSESRS(ph)R ddPTM_A549_PD325901_60min_R1 2 SKPNLPSESRSR 12 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 SKPNLPS(0.006)ES(0.165)RS(0.829)R;SKPNLPS(0.013)ES(0.155)RS(0.832)R 63.894 0.0013888 9632700.0 3131.4 3080.8999999999996 3454.8999999999996 3352.2000000000003 3316.3 3577.1 3295.0 3172.1 3585.5 3208.3999999999996 3997.6000000000004 True False 3449.2974227851573 3340.5382554194894 3689.3702900014327 3559.2577806014247 3083.3745286139133 3547.9692835837254 3420.393028093186 3108.82997703569 3434.813903912119 3005.8210764510286 3505.9205428743053 0.9838492859730569 0.9528277137395623 1.0523257001645359 1.0152134759116336 0.8794764430359935 1.0119936376752414 0.9756048336705885 0.8867371462123715 0.9797181259265249 0.8573557328788537 1.0 11.7755775843248 -9.708996467557771 1.7120320086420244 0.9950615018790747 0.9708971374333805 0.0 0.06418673068030088 0.888639935734097 5.223195459443464 0.011790158618739846 0.00880043674734221 1.954355351946281e-10 9.708996467557771 -0.024164364445694253 SKPPPTYES(ph)EEEDKCKPMSYEEK ddPTM_A549_MK2206_60min_R1 4 SKPPPTYESEEEDKCKPMSYEEK 23 3 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPT(0.017)YES(0.982)EEEDKCKPMSYEEK;S(0.002)KPPPT(0.168)Y(0.007)ES(0.823)EEEDKCKPMSYEEK;SKPPPT(0.012)YES(0.987)EEEDKCKPMSYEEK;SKPPPT(0.004)Y(0.012)ES(0.979)EEEDKCKPMS(0.005)YEEK 90.137 3.0694e-07 88060100.0 5387.09 6008.5 5286.83 4516.43 6462.2 5786.860000000001 5320.099999999999 5357.09 7670.2 7170.8 8304.699999999999 True False 6296.299090294699 6314.3069856215 6036.581991466919 5622.955552750245 5511.618940424578 6399.22168419322 6286.6933055101745 6116.473912900063 5932.911946792499 5550.911299663109 6242.4137919400955 1.0086321253525645 1.0115168901129608 0.9670268893838893 0.9007662324484697 0.8829307258581472 1.0251197529480645 1.0070933320100073 0.9798251312332674 0.9504195243277191 0.889225143458157 1.0 12.60788827725942 SKPPPTYES(ph)EEEDKCKPMSYEEK ddPTM_A549_PD325901_60min_R1 6 SKPPPTYESEEEDKCKPMSYEEK 23 3 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPTYES(1)EEEDKCKPMSYEEK;SKPPPTYES(1)EEEDKCKPMSYEEK;S(0.015)KPPPT(0.095)Y(0.355)ES(0.532)EEEDKCKPMS(0.002)Y(0.002)EEK;SKPPPTYES(1)EEEDKCKPMSYEEK;SKPPPT(0.001)YES(0.999)EEEDKCKPMSYEEK;SKPPPT(0.032)Y(0.003)ES(0.965)EEEDKCKPMSYEEK 163.19 5.3659e-34 295323700.0 40338.6 42494.6 49432.00000000001 41911.40000000001 44237.100000000006 46535.5 44259.600000000006 46498.4 38883.200000000004 45623.2 45306.200000000004 True False 44433.74497629218 46075.769076811666 52786.75277876376 44500.17199030446 41130.038705710176 46156.53031679587 45943.92329778245 45570.952934710884 37249.074323970344 42742.543365896 39733.82461966474 1.1182851236098073 1.1596107225481693 1.3285092307131938 1.1199569237611422 1.0351391817779967 1.1616432789596716 1.1562924973259248 1.1469057753921148 0.9374651114137987 1.0757218509678077 1.0 15.278080047736506 -8.753489364516389 24.588871029526576 0.9704696348996555 1.154672698543574 0.4271830617245217 0.0739852187673256 72.37831439403607 223860.9072177217 0.01195595091924465 0.013435966769914156 1.7640489639295563e-09 8.753489364516389 0.18420306364391847 SKPS(ph)PQKDQALGDGIAPPQK ddPTM_A549_MK2206_60min_R1 2 SKPSPQKDQALGDGIAPPQK 20 2 Q9H9J4-2;Q9H9J4;B4DP25;E5RJP3 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 S(0.009)KPS(0.991)PQKDQALGDGIAPPQK;S(0.016)KPS(0.984)PQKDQALGDGIAPPQK 206.46 2.5158e-56 60866000.0 6263.200000000001 7355.3 7940.0 7188.700000000001 10333.3 7584.8 7818.200000000001 7546.9 10930.7 10523.9 10125.4 True False 7320.27503946171 7729.653352973592 9066.011392885215 8949.93182271301 8813.285258439742 8387.418501617238 9238.665739580016 8616.696186411926 8454.913902741095 8146.543680834021 7610.983733176422 0.9618040579370171 1.015591889821008 1.1911747167933495 1.1759231311584715 1.1579692674972442 1.102015034542292 1.2138596091473035 1.1321396140753244 1.1108831918646687 1.0703667182105623 1.0 12.893867221341292 -10.325049565699398 0.8207929124457389 1.0034331429720353 1.1223254217817176 0.13628613432044878 0.07337441839536636 0.6261691419065376 0.7985305536414099 0.041854527457191294 0.014473774662707637 4.730972616490207e-11 10.325049565699398 0.11889227880968223 SKPS(ph)PQKDQALGDGIAPPQK ddPTM_A549_PD325901_60min_R1 2 SKPSPQKDQALGDGIAPPQK 20 2 Q9H9J4-2;Q9H9J4;B4DP25;E5RJP3 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 S(0.112)KPS(0.888)PQKDQALGDGIAPPQK;S(0.026)KPS(0.974)PQKDQALGDGIAPPQK 175.46 2.6291999999999996e-35 107262000.0 6502.5 6611.5 6842.0 6770.5 7781.6 8132.299999999999 7447.5 8490.3 7149.9 7498.3 7615.1 True False 7162.629013112505 7168.674308061272 7306.339264288343 7188.698408078857 7235.047261062641 8066.073245055472 7730.918687928377 8320.954305988496 6849.414567447007 7024.856058332114 6678.490976096189 1.0724921301457402 1.073397318903261 1.0940105018393171 1.0763956159870267 1.0833356347951193 1.2077688319001627 1.157584657312417 1.2459333007667526 1.0255931455118517 1.0518627761085015 1.0 12.70530644316371 -8.966147993110132 24.859138473348594 1.0112910142715805 1.124899201039184 0.3831591591117718 0.05623951006398076 109.95821719253462 80748.10363925024 0.010106146530934447 0.010701989787184306 1.081065497369433e-09 8.966147993110132 0.11360818676760354 SKPVLEPLT(ph)PPLGS(ph)PRPR ddPTM_A549_MK2206_60min_R1 2 SKPVLEPLTPPLGSPRPR 18 2 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 2 SKPVLEPLT(1)PPLGS(1)PRPR;S(0.001)KPVLEPLT(0.999)PPLGS(1)PRPR 71.656 0.00046076 19718500.0 627.1700000000001 851.1600000000001 579.53 534.6 1285.56 1072.0 825.05 643.85 1307.34 961.23 993.37 True False 733.0209631656659 894.4804084016972 661.7160683273005 665.5770239991056 1096.4558269710344 1185.438328463991 974.9509053798173 735.1177092079288 1011.2295773929886 744.0874753967713 746.688813382727 0.9816953863884186 1.1979293011628627 0.8862005918228851 0.8913713612285681 1.4684240708036815 1.5875935292154646 1.3056990916510371 0.9845034451200929 1.3542851577108965 0.9965161685305411 1.0 9.544363307050055 -5.25778237112684 22.618862933004678 1.1791576442686034 0.9816951175367968 0.049855940057620174 0.2275402283660888 249.95695629918873 1545717.1171025771 0.03284402685590326 0.3270126954349042 5.523541595815306e-06 5.25778237112684 -0.19746252673180653 SKPVLEPLT(ph)PPLGS(ph)PRPR ddPTM_A549_PD325901_60min_R1 2 SKPVLEPLTPPLGSPRPR 18 2 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 2 SKPVLEPLT(1)PPLGS(1)PRPR;SKPVLEPLT(1)PPLGS(1)PRPR 51.857 0.0076449 33288000.0 1147.98 1100.44 1788.3999999999999 1610.1100000000001 1666.92 1782.6999999999998 1057.07 1494.57 1819.25 1494.21 1722.65 True False 1264.5220845017905 1193.1779407945166 1909.7715785228404 1709.562837874876 1549.8412897618139 1768.1822822523009 1097.2973773008987 1464.7596288825168 1742.7932491122913 1399.8653255965264 1510.7749707780724 0.837002272979504 0.7897787320238775 1.2641006208484369 1.1315800638359959 1.025858463198938 1.1703809743033138 0.726314241713823 0.9695418955267329 1.1535756699852697 0.9265875809920084 1.0 10.561073072418665 -5.729471639775258 24.996199841251574 1.0608561339074098 0.8133900531742952 0.27741330318492685 0.13857418286737425 169.42339923444834 132473.12089077107 0.01840861624551631 0.07128398874012191 1.8643539200015723e-06 5.729471639775258 -0.2474660807331146 SKPVLEPLT(ph)PPLGSPR ddPTM_A549_MK2206_60min_R1 1 SKPVLEPLTPPLGSPR 16 1 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 SKPVLEPLT(0.999)PPLGS(0.001)PR 87.208 5.3675e-06 13448000.0 2218.7 2323.1 2980.5 2040.6 3672.9 2333.3 2056.6 2627.3 3963.0 3541.6 2998.9 True False 2593.1623179929907 2441.3358672376303 3403.179717442615 2540.5470916060153 3132.6212754612106 2580.2082572808113 2430.2575989384063 2999.727820768799 3065.3868276105804 2741.5501002519754 2254.1903645705625 1.1503741470774163 1.0830211616589533 1.5097126537895313 1.1270330720670991 1.3896879893983554 1.144627489245948 1.0781066395878176 1.3307340266891197 1.3598615608467282 1.2162016763718437 1.0 11.13839363975745 -10.962322697442117 1.2321651402966187 1.0002174923307348 1.2519551949825565 0.038757472613912824 0.14808542623604573 0.4402020090555482 1.1900905665427097 0.09281131389434681 0.021606741024896913 1.0906296556757754e-11 10.962322697442117 0.2517377026518217 SKPVLEPLT(ph)PPLGSPR ddPTM_A549_PD325901_60min_R1 1 SKPVLEPLTPPLGSPR 16 1 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 S(0.002)KPVLEPLT(0.997)PPLGS(0.001)PR 66.137 0.001033 6059500.0 3436.4 3913.8 3820.4 4007.7 5281.9 4859.7 4444.3 4399.0 5478.0 4439.9 4220.5 True False 3785.2607982560257 4243.629661482294 4079.6753179314787 4255.246526852911 4910.91756556579 4820.124214428398 4613.430268514276 4311.258494051261 5247.778710258146 4159.563956281925 3701.4052559538227 1.0226550557162901 1.146491499318073 1.1021963378285038 1.1496300006621047 1.3267711115032406 1.3022416842022586 1.2463996643149067 1.1647626228218244 1.4177800990088656 1.1237796643831799 1.0 11.8538573853765 -6.529172394771178 24.63229519961993 1.2190809693469786 1.1010288583458059 0.23521903938719546 0.10744152182565966 235.22030322801027 920612.009330481 0.021997749909376182 0.04589409536083949 2.9568385057841053e-07 6.529172394771178 -0.11805211100117274 SKPVLEPLTPPLGS(ph)PRPR ddPTM_A549_MK2206_60min_R1 3 SKPVLEPLTPPLGSPRPR 18 2 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 SKPVLEPLTPPLGS(1)PRPR;SKPVLEPLTPPLGS(1)PRPR;SKPVLEPLT(0.023)PPLGS(0.977)PRPR 82.885 3.5617e-05 14716700.0 4028.39 4193.7 4341.120000000001 3833.9500000000003 5223.0 4734.5 4047.4000000000005 4145.3 6291.4 5340.6 5632.700000000001 True False 4708.2837473204045 4407.141417259029 4956.756092932223 4773.2679221125545 4454.7036188662605 5235.50164749325 4782.760189605814 4732.908969448831 4866.407945301337 4134.154750792212 4233.945135388514 1.1120323000804222 1.0409065957002823 1.1707180736713496 1.1273806744013348 1.052140137960831 1.2365539656462343 1.129622618307013 1.1178484411358653 1.1493790754694764 0.9764308744196457 1.0 12.047786859294375 -10.769053713173639 0.9201849577678494 0.9966971418167144 1.1271594915208838 0.5139482985614414 0.05115108985644843 0.4268094797879008 0.6151066333318506 0.03831763108702179 0.008778874901978404 1.701947999890525e-11 10.769053713173639 0.13046234970416937 SKPVLEPLTPPLGS(ph)PRPR ddPTM_A549_PD325901_60min_R1 2 SKPVLEPLTPPLGSPRPR 18 2 Q9H7P9;Q9H7P9-3;H7BXC7;E7ESZ3;Q9H7P9-2 Q9H7P9 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 SKPVLEPLT(0.001)PPLGS(0.999)PRPR;SKPVLEPLTPPLGS(1)PRPR 90.475 1.1919e-06 30877000.0 4084.2 4388.2 4043.8999999999996 4850.3 5906.1 5999.7 4853.0 5343.6 5428.9 5171.3 6050.799999999999 True False 4498.824977370869 4758.009014389239 4318.343371946162 5149.892015169467 5491.275910938888 5950.840432394192 5037.6835706634965 5237.017706026893 5200.742212508297 4844.783235460419 5306.589959181468 0.84778078049671 0.8966226995091127 0.8137699360913612 0.9704710661239463 1.03480313217679 1.1214057385568375 0.9493259530910789 0.9868894612755598 0.9800535282568736 0.9129748619596978 1.0 12.373569360506023 -6.386314983206567 5.042305485519581 0.9995956974816117 0.8579071666425532 0.5928717938306859 0.05254903699725361 0.10380818395031893 3.8321305656651172 0.006484696923522471 0.015383037578616457 4.1085163234038876e-07 6.386314983206567 -0.14168853083905852 SKPYEGSQRNS(ph)TELAPPLPVR ddPTM_A549_MK2206_60min_R1 3 SKPYEGSQRNSTELAPPLPVR 21 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 SKPYEGSQRNS(0.962)T(0.038)ELAPPLPVR;SKPYEGS(0.023)QRNS(0.929)T(0.048)ELAPPLPVR;SKPYEGSQRNS(0.886)T(0.114)ELAPPLPVR 171.29 9.2556e-36 76744200.0 5350.3 6334.099999999999 6012.9 5651.9 7473.6 4937.4 4203.9 4690.2 9343.1 7767.5 8291.4 True False 6253.2998377238455 6656.47863487146 6865.619635299682 7036.615753723435 6374.243340218052 5459.8723908191305 4967.694213836997 5355.05021313509 7226.902767864846 6012.816355236965 6232.416549001422 1.0033507530439008 1.068041358040804 1.1015983256766935 1.1290348933514183 1.0227563081032114 0.8760442033827037 0.7970735227305911 0.8592253375607724 1.1595667123730304 0.9647648400844385 1.0 12.605575945066736 -4.921474693863096 10.290297740006952 1.0347089381439598 0.8020924545391713 0.0 0.11628782358565486 239027.10606311774 1214838.8185540447 0.01807173925271071 1095854.5030254547 1.1981889390665854e-05 4.921474693863096 -0.23261648360478848 SKPYEGSQRNS(ph)TELAPPLPVR ddPTM_A549_PD325901_60min_R1 2 SKPYEGSQRNSTELAPPLPVR 21 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 SKPYEGS(0.022)QRNS(0.956)T(0.022)ELAPPLPVR;SKPYEGSQRNS(0.5)T(0.5)ELAPPLPVR 212.76 7.074599999999999e-68 98331000.0 3657.9 3865.7 4415.5 4054.9 4786.5 4836.1 4141.3 4470.1 4930.4 4713.8 5104.0 True False 4029.247315196344 4191.476105675328 4715.16238255849 4305.361963653935 4450.312752528569 4796.716405003844 4298.899437706313 4380.940348774387 4723.1924339278485 4416.169863537859 4476.240356921766 0.9001409651663989 0.9363831634272951 1.0533756024220797 0.9618254652023778 0.9942077273949099 1.0715949150466226 0.9603817254939796 0.9787098098965992 1.0551695300776716 0.9865801457039683 1.0 12.128071790241144 -5.616521765000401 5.087589141430452 1.0168932258925034 0.908383846110908 0.4476888826310884 0.03735572768665572 0.1115260024150067 4.600922932627638 0.005184826561201817 0.021561532796076553 2.4181221488511958e-06 5.616521765000401 -0.10850937978159536 SKPYEGSQRNS(ph)TELAPPLPVRR ddPTM_A549_MK2206_60min_R1 2 SKPYEGSQRNSTELAPPLPVRR 22 3 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(0.006)KPYEGS(0.021)QRNS(0.808)T(0.164)ELAPPLPVRR;SKPYEGS(0.001)QRNS(0.792)T(0.207)ELAPPLPVRR 154.69 2.8694e-33 21025000.0 1890.94 2810.4 2501.5 1707.8600000000001 2877.3999999999996 2144.3599999999997 1841.1 1930.1399999999999 3764.3999999999996 3104.4 5093.299999999999 True False 2210.0844429556346 2953.437355811044 2856.2503147735974 2126.285776668748 2454.1382716687312 2371.2747518890324 2175.6040384155895 2203.743255805843 2911.7694105115474 2403.113883900563 3828.4930420711744 0.5772726810964771 0.7714359993229257 0.7460508046864298 0.5553845216128301 0.6410193892741328 0.6193754894761929 0.5682664208888337 0.5756163669592674 0.7605523579419413 0.6276918509431334 1.0 11.902560920010332 -9.74022815234183 0.7960358183349198 0.9730168051278707 0.6369170284128988 0.01600708445506016 0.12649653796371604 0.20207401701010183 0.2691423221520254 0.031003384694491737 0.017210710352349213 1.8187451476897922e-10 9.74022815234183 -0.33609977671497193 SKPYEGSQRNS(ph)TELAPPLPVRR ddPTM_A549_PD325901_60min_R1 2 SKPYEGSQRNSTELAPPLPVRR 22 3 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 SKPYEGS(0.002)QRNS(0.95)T(0.047)ELAPPLPVRR;S(0.002)KPYEGS(0.042)QRNS(0.915)T(0.042)ELAPPLPVRR 140.57 1.8207999999999997e-27 36359000.0 1963.75 2994.2 2538.3 3330.6 2471.1 2548.6000000000004 2695.1 2835.5 4088.7 3061.3999999999996 3947.6 True False 2163.1084543636575 3246.531742145812 2710.5643020378698 3536.3235976585834 2297.538460832204 2527.845046585637 2797.6635053153072 2778.9437280932834 3916.8661578372567 2868.102681538208 3462.0702258981883 0.6248020153324497 0.9377428909038211 0.7829316348817418 1.0214476792541465 0.6636313855349765 0.7301541799111892 0.808089762127656 0.8026826571296147 1.131365311002921 0.8284357319164768 1.0 11.757419273817101 -8.751803945931517 24.898785424398124 1.0620336181852876 0.8019481016094142 0.2488391376108985 0.13000344084281232 103.83966449277584 268330.323024278 0.018408492499804273 0.02074292730758736 1.7709082210777454e-09 8.751803945931517 -0.2600855165758734 SKQDT(ph)PALPPK ddPTM_A549_PD325901_60min_R1 1 SKQDTPALPPK 11 1 Q9UBC2;Q9UBC2-2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.073)KQDT(0.927)PALPPK 70.96300000000001 0.0010939 3024200.0 1743.7 1921.4 2165.7 2065.5 2333.5 2571.2 1982.5 2298.2 2379.2 2024.0 2880.9 True False 1920.7191403559052 2083.3231211538878 2312.6774254120537 2193.0812439091465 2169.603010137976 2550.260999678642 2057.9451223656265 2252.3605980969764 2279.2104978908683 1896.2042945819994 2526.567563529765 0.7602088968768943 0.8245665586885639 0.9153435905672382 0.8680081528654163 0.8587156114309138 1.0093777172203446 0.8145221018711073 0.8914705589548119 0.9020975851944667 0.7505060707471798 1.0 11.302963044576806 -14.628424292658226 0.019640690956748374 2.1037699414312927 1.3569517690390344e-06 0.0 0.08999599959196541 1354.9750993832988 2.1954873377168083 153.8725669269859 89.42725946073722 2.352749595061475e-15 14.628424292658226 -2.1037685844795235 SKQSETVDQNS(ph)DSDEMLAILK ddPTM_A549_PD325901_60min_R1 1 SKQSETVDQNSDSDEMLAILK 21 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 SKQSETVDQNS(0.875)DS(0.124)DEMLAILK 65.779 5.6043999999999994e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SKRPPKS(ph)PEEEGQMS(ph)S ddPTM_A549_PD325901_60min_R1 1 SKRPPKSPEEEGQMSS 16 3 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 2 S(0.14)KRPPKS(0.86)PEEEGQMS(0.529)S(0.471) 44.848 0.0096197 5721100.0 1001.2 789.33 880.88 813.87 849.35 827.23 869.52 913.94 841.28 1067.4 989.08 True False 1102.841086955516 855.8496092538761 940.6618139617531 864.140901467121 789.6945860984317 820.4933131472327 902.610059419601 895.7107497279402 805.923927230006 1000.0041818363767 867.4294302947064 1.2713899810625853 0.986650417156245 1.0844246011369088 0.9962088802699856 0.9103848203883692 0.9458905641101809 1.040557338610176 1.0326035968408696 0.9290945166066085 1.1528363540727784 1.0 9.760602581811272 -2.209857365077242 1.0178470920111051 0.9742750255938173 199.9999999954047 0.4645035673192861 0.07380254597042057 462.62638259207944 0.900056311039502 0.007801196129246042 214389.30350780868 0.006167975428286039 2.209857365077242 199.02572496981088 SKS(ph)AAELEK ddPTM_A549_PD325901_60min_R1 1 SKSAAELEK 9 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 S(0.386)KS(0.614)AAELEK 55.261 0.0050305 5679200.0 2234.1 2352.6 2160.9 2344.0 3007.0 2475.4 2434.4 3013.2 2411.5 3257.7 2988.2 True False 2460.904187342505 2550.861858450418 2307.551668547309 2488.7835563897575 2795.7986935868416 2455.241163116254 2527.042424154795 2953.099362190328 2310.1530412171446 3052.008266037441 2620.670343760506 0.9390361489767743 0.973362355369765 0.8805196250803944 0.9496744076626216 1.0668257838088238 0.936875242230249 0.9642732937285959 1.126848849654553 0.88151226144003 1.1645906831829869 1.0 11.35572017196699 -6.521984545712592 24.999940467759863 0.9665960668637398 0.9318592252707842 0.0 0.08973820034786818 96.35079252878356 2693709.5245837625 0.01058438068951363 0.02224594449044082 3.0061832751910284e-07 6.521984545712592 -0.034736841592955536 SKS(ph)ATT(ph)TPSGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SKSATTTPSGSPR 13 1 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 3 S(0.451)KS(0.491)AT(0.283)T(0.296)T(0.252)PS(0.348)GS(0.879)PR 49.224 0.012421 64256000.0 1748.0 1960.5 1740.0 2085.3 2317.9 1904.7 2112.9 2446.3 2311.7 2215.7 2406.4 True False 1925.4556731904136 2125.7182153753474 1858.0868634699966 2214.1042449400848 2155.0987003208975 1889.1887547012727 2193.3075657232453 2397.506627414776 2214.5472881532964 2075.800323866272 2110.4280554264387 0.9123531447753384 1.0072450515001419 0.8804312749218768 1.0491256687225459 1.0211666276799152 0.8951685179903175 1.0392714217780143 1.1360285991508625 1.049335599220803 0.9835920814873881 1.0 11.04331993326655 -7.832660094099204 24.9999240626149 1.0352267598654994 0.96610943483116 0.2972041978429656 0.0611717098335946 50.405130987207045 17692.283577534552 0.009384820803035638 0.012966996061011767 1.4700764008246803e-08 7.832660094099204 -0.06911732503433943 SKS(ph)ATTT(ph)PSGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SKSATTTPSGSPR 13 1 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 3 S(0.135)KS(0.802)AT(0.083)T(0.186)T(0.754)PS(0.324)GS(0.717)PR;S(0.055)KS(0.865)AT(0.078)T(0.01)T(0.988)PS(0.085)GS(0.918)PR 117.08 0.00058525 96911000.0 3709.5 3338.1000000000004 3027.6000000000004 3089.1000000000004 4078.0 3343.3999999999996 3339.0 4006.2999999999997 3107.0 4231.200000000001 4823.7 True False 4086.08570921043 3619.413402062967 3233.071142437794 3279.9066911448817 3791.575348336259 3316.1724589007385 3466.06747217091 3926.3912036184493 2976.423594883545 3964.041309898892 4230.415479953666 0.9658828378850352 0.8555692506360176 0.7642443532457016 0.7753154995501305 0.8962654770679371 0.7838881250824704 0.819320818154928 0.9281337074866823 0.7035771330233843 0.9370335676679937 1.0 12.046583645745596 -11.08046088378803 1.4085707314990024 0.9998099026780333 0.816121234325127 0.2952853050914821 0.07630889032265271 0.32902227858635763 1.1676734906705244 0.05653767339300602 0.012487781435588654 8.308815515092265e-12 11.08046088378803 -0.18368866835290631 SKS(ph)ATTTPSGSPR ddPTM_A549_PD325901_60min_R1 1 SKSATTTPSGSPR 13 1 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 S(0.039)KS(0.957)AT(0.003)T(0.001)TPSGSPR 50.053000000000004 0.008109100000000001 6615900.0 1358.8 1243.3 1437.2 1309.2 1622.7 1554.0 1895.6 1412.9 1983.4 1709.2 1374.1 True False 1496.744375704309 1348.0772543617293 1534.737034585677 1390.0663105910705 1508.727150011095 1541.3447392270587 1967.7380953121215 1384.718601101393 1900.0445954592926 1601.2808203061024 1205.0944111375784 1.2420142039256663 1.118648665119257 1.273540911319076 1.153491625007939 1.2519576359058002 1.2790240540341304 1.6328497395109707 1.1490540395040534 1.576676962318412 1.328759643648612 1.0 10.234930461112688 -5.87770222131645 7.147448645491044 1.284856390506677 1.1808310772228305 0.057768807381589515 0.17419750505268158 0.6967043331024418 40.47982341433984 0.031028288340115576 0.09787816930342509 1.3252498955931637e-06 5.87770222131645 -0.10402531328384645 SKS(ph)DATASISLSSNLK ddPTM_A549_MK2206_60min_R1 1 SKSDATASISLSSNLK 16 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.12)KS(0.877)DAT(0.003)ASISLSSNLK 71.692 0.00034886 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SKS(ph)DATASISLSSNLK ddPTM_A549_PD325901_60min_R1 3 SKSDATASISLSSNLK 16 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.178)KS(0.634)DAT(0.188)ASISLSSNLK;S(0.023)KS(0.939)DAT(0.037)AS(0.001)ISLSSNLK;S(0.02)KS(0.975)DAT(0.005)ASISLSSNLK 191.44 3.7267999999999997e-35 78056600.0 12678.4 12241.5 13614.8 14101.5 15761.900000000001 14004.5 13404.8 13348.2 13878.2 14915.7 14410.9 True False 13965.501834655222 13273.134166547985 14538.782200443282 14972.517628169864 14654.83851960306 13890.451995177178 13914.926999388012 13081.95967953968 13294.947516740533 13973.920156470718 12638.450658221767 1.1050010964413712 1.0502184583767262 1.150361115742085 1.184679834029316 1.1595439121384359 1.099062881267091 1.100999432263151 1.0350920404178967 1.0519444096647788 1.1056671845595394 1.0 13.625531994591185 -8.346289656919726 0.956348448658123 1.0190417840671067 1.1290594464265984 0.34688971274165925 0.04359677307461301 0.2577918387952423 0.46288351563256735 0.008137195643681478 0.010384308494643795 4.505161282122821e-09 8.346289656919726 0.11001766235949173 SKS(ph)DATASISLSSNLKR ddPTM_A549_MK2206_60min_R1 4 SKSDATASISLSSNLKR 17 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.035)KS(0.962)DAT(0.003)ASISLSSNLKR;S(0.002)KS(0.988)DAT(0.01)ASISLSSNLKR;S(0.196)KS(0.803)DAT(0.001)ASISLSSNLKR;S(0.036)KS(0.961)DAT(0.003)ASISLSSNLKR 129.85 1.626e-12 78222000.0 11599.6 14729.2 13344.0 11553.7 18812.3 14046.0 13779.5 13067.300000000001 21263.1 20198.2 22474.9 True False 13557.328897007928 15478.853366500156 15236.379852224205 14384.357018665303 16045.035590503114 15532.338397019788 16283.056785262963 14919.629791927891 16447.041800193423 15635.41259174087 16893.762054315575 0.8025050224703891 0.9162466783143797 0.9018938353243832 0.851459667326779 0.9497609554885585 0.9194126416058994 0.9638502503415688 0.8831443075828462 0.9735570885462995 0.9255139584345421 1.0 14.044203015725333 -2.000000000022987 0.11841178200154281 1.0397380387794724 0.4215830206696097 0.3864436156061155 0.0423888963695231 35.94213400055805 0.2828540303853971 0.12616611827921115 3.681811015549552 0.009999999999470707 2.000000000022987 -0.6181550181098627 SKS(ph)DATASISLSSNLKR ddPTM_A549_PD325901_60min_R1 3 SKSDATASISLSSNLKR 17 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.252)KS(0.747)DAT(0.001)ASISLSSNLKR;S(0.06)KS(0.93)DAT(0.01)ASISLSSNLKR;S(0.025)KS(0.974)DATASISLSSNLKR 122.34 1.3102e-10 102389000.0 11808.5 13407.8 13664.099999999999 14347.099999999999 14824.1 15694.7 13425.7 16158.3 16857.6 14863.400000000001 16407.9 True False 13007.29022704176 14537.72236067819 14591.427994908267 15233.287782371792 13782.906356368703 15566.887566761196 13936.62236032494 15836.010030558866 16149.133695883127 13924.922387396293 14389.832318247774 0.9039222931421647 1.0102773985936497 1.014009591786893 1.0586146833034622 0.9578225827475816 1.0817977042735094 0.9685048478745567 1.100499969723566 1.12226003324614 0.9676917756531515 1.0 13.81276216029744 -3.505357396088712 0.5612596063128693 1.0542895640627166 8.69241534914839e-14 0.24285502009446214 0.05589932696692599 19.052169407817566 0.853377333067521 0.01006978976139984 20.27238562558401 0.00031235078655276484 3.505357396088712 -1.0542895640626297 SKS(ph)DGEAKPEPSPSPR ddPTM_A549_MK2206_60min_R1 2 SKSDGEAKPEPSPSPR 16 2 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 S(0.458)KS(0.54)DGEAKPEPS(0.001)PS(0.001)PR;S(0.132)KS(0.867)DGEAKPEPSPSPR 88.396 4.0835e-06 34964600.0 4538.1 4653.6 4288.3 3520.3 4703.5 3695.2 3889.6 3535.8999999999996 5143.4 5486.299999999999 5787.5 True False 5304.0203341073575 4890.44836286731 4896.445422683835 4382.773658032273 4011.621380688773 4086.223611324755 4596.289972202097 4037.124653239599 3978.4281123220394 4246.9410195991695 4350.3040231258565 1.2192298069081204 1.1241624348252652 1.125540972919303 1.0074637622413998 0.9221473624287695 0.9392961019741903 1.056544542121332 0.928009773978687 0.9145172592933838 0.9762400505856101 1.0 12.086900512595706 -6.191155561582891 1.8052278970150106 0.9596462843433321 1.1774359841934663 0.7968366708638334 0.04322492166639497 0.1288648958474633 0.7919105523555037 0.006898629533369953 0.025575769266832454 6.439385694092608e-07 6.191155561582891 0.2177896998501342 SKS(ph)DGEAKPEPSPSPR ddPTM_A549_PD325901_60min_R1 1 SKSDGEAKPEPSPSPR 16 2 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 S(0.158)KS(0.842)DGEAKPEPSPSPR 107.47 1.474e-07 30159000.0 3207.9 2728.4 2877.3 3089.3 3845.2 3439.5 3502.5 3191.7 3244.6 4105.5 4561.5 True False 3533.5636464688337 2958.331843320633 3072.570880610474 3280.119044690647 3575.1264172198585 3411.4898523625893 3635.7895541415423 3128.0390396597886 3108.2407454004365 3846.2780293509873 4000.4644177309247 0.8832883579234737 0.7394971019386314 0.7680535457313842 0.8199345631353323 0.8936778443458024 0.8527734523127184 0.9088418679658631 0.7819189756558369 0.7769699766917162 0.961457877816248 1.0 11.965951778228229 -10.837486136816231 1.0106699380255368 1.0031842810412548 0.8218095493056786 0.5500954952861541 0.05392100704368076 0.31940708655648065 0.5625226403285549 0.042554324441402704 0.009740343004348475 1.4538307928327399e-11 10.837486136816231 -0.18137473173557617 SKS(ph)DLSER ddPTM_A549_MK2206_60min_R1 2 SKSDLSER 8 1 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 S(0.052)KS(0.948)DLSER;S(0.122)KS(0.877)DLS(0.001)ER 80.014 0.0011118 57352000.0 9926.0 10612.5 8603.3 8220.8 12601.2 9489.4 9131.0 9336.0 13314.9 12731.400000000001 13437.2 True False 11601.266132599454 11152.630920347541 9823.377306852564 10234.89636904574 10747.580172708698 10493.56200944608 10789.984506421575 10659.40659030089 10299.09640952614 9855.367897658683 10100.37239214631 1.148597861760046 1.104180171517184 0.9725757551762025 1.0133187145658147 1.0640776156991631 1.038928229775518 1.068275909788384 1.0553478799048306 1.0196749198608115 0.9757430236257296 1.0 13.302120864447181 -5.5939124122613455 5.420280896039068 1.0206483403197388 1.1386228079705734 0.6305368253920934 0.03115009293662556 0.0804695721871565 4.198117252499954 0.0042984970745689995 0.01777694236362398 2.547343944578978e-06 5.5939124122613455 0.11797446765083452 SKS(ph)DLSER ddPTM_A549_PD325901_60min_R1 4 SKSDLSER 8 1 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 S(0.139)KS(0.857)DLS(0.005)ER;S(0.22)KS(0.774)DLS(0.006)ER;S(0.017)KS(0.982)DLS(0.001)ER;S(0.039)KS(0.961)DLSER 92.24700000000001 0.00072218 103749000.0 18174.899999999998 19035.600000000002 18768.2 19288.8 22057.100000000002 21812.1 19883.4 21019.5 21078.7 20230.899999999998 22421.1 True False 20020.002468345778 20639.796817444014 20041.922914354946 20480.225367956802 20507.88538886409 21634.4694893787 20640.073667613957 20600.24958302125 20192.83554215379 18953.51752137301 19663.446839063203 1.0181329159735233 1.0496530433535796 1.019247697435216 1.041537912227626 1.0429445842690883 1.1002379016480408 1.04966712278595 1.0476418377523216 1.026922477397956 0.9638959881499588 1.0 14.263228615864664 -9.41565031917065 1.0289573823834728 1.0058494485617702 1.0467660959945695 0.4514009479158534 0.024230983794147072 0.3335573034910413 0.7416247189808027 0.0058299856316328755 0.004440806817583774 3.840163194151252e-10 9.41565031917065 0.040916647432799325 SKS(ph)DSYTLDPDTLR ddPTM_A549_MK2206_60min_R1 1 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.003)KS(0.993)DS(0.003)YTLDPDTLR 122.96 1.1806e-06 7274900.0 3712.9 4000.3 3318.0 4168.1 5974.0 4049.7 4032.9 4531.4 6539.1 6541.7 6414.6 True False 4339.546748310348 4203.89818333722 3788.5422923920833 5189.284687113118 5095.23251370995 4478.2365660267005 4765.6257272968505 5173.739826830486 5058.004290796959 5063.925426592033 4821.677786046331 0.9000076199344463 0.87187455692354 0.7857311210956309 1.076240453505753 1.0567343443096242 0.9287714286895051 0.9883749886996407 1.0730165009787678 1.049013334203821 1.0502413581527064 1.0 12.235319529131147 -6.264679454007996 24.999443328594595 1.023188401191452 0.8544714432038577 0.7231520763552668 0.04822991865859032 112.09912505855965 864926.9054631374 0.00682919478809145 0.016500284231228075 5.436514441090707e-07 6.264679454007996 -0.16871695798759434 SKS(ph)DSYTLDPDTLR ddPTM_A549_PD325901_60min_R1 2 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.059)KS(0.939)DS(0.001)YTLDPDTLR;S(0.036)KS(0.882)DS(0.059)YT(0.023)LDPDTLR 123.42 1.0516e-06 22828000.0 8769.5 8440.400000000001 9351.7 9002.2 11319.0 9269.1 9675.099999999999 10090.400000000001 11870.2 11574.6 10203.7 True False 9659.773184235308 9151.70212958638 9986.362598340436 9558.24544852042 10523.992488430142 9193.615522760307 10043.29122491786 9889.139056234333 11371.336773732437 10843.777780666409 8948.709586583582 1.0794599032152963 1.0226840016472472 1.1159556025052555 1.0681143863301463 1.1760346434985793 1.0273677376393913 1.1223172601304816 1.1050910704556438 1.2707236349228492 1.2117699960812252 1.0 13.127463943881693 -7.968579037688303 24.46766361989531 1.1289454269382626 1.083388417864016 0.13026684289779422 0.0743902117419742 455.5127267620538 354708.68475445505 0.015854076744341493 0.021905391932240753 1.0750309366304683e-08 7.968579037688303 -0.045557009074246535 SKS(ph)EDMDNVQSK ddPTM_A549_MK2206_60min_R1 5 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 S(0.179)KS(0.821)EDMDNVQSK;S(0.446)KS(0.553)EDMDNVQSK;SKS(1)EDMDNVQSK;S(0.026)KS(0.974)EDMDNVQSK;SKS(1)EDMDNVQSK 261.27 2.0693999999999994e-64 149579900.0 24202.5 24748.13 21125.24 18357.170000000002 26345.0 21252.350000000002 21078.870000000003 21585.18 29588.58 29937.2 29869.5 True False 28287.2903056859 26007.704109190152 24121.116689853192 22854.677474084667 22469.685399010472 23501.259570831808 24908.627829687277 24644.945366841344 22886.81387325305 23174.36572771161 22452.07879373784 1.259896269096275 1.1583650827220515 1.0743377890060168 1.017931465680546 1.000784185973797 1.046729783319066 1.1094129883703507 1.0976687545616097 1.01936279858578 1.0321701585233714 1.0 14.454561406991308 -5.5379718121283945 1.5118412839320292 1.025154764782591 1.2900525522593604 0.769748989689164 0.03629892051788001 0.24954507554831126 0.7542934180452033 0.006113926665237556 0.08393760642015795 2.897531645811432e-06 5.5379718121283945 0.2648977874767695 SKS(ph)EDMDNVQSK ddPTM_A549_PD325901_60min_R1 6 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 S(0.061)KS(0.939)EDMDNVQSK;S(0.415)KS(0.583)EDMDNVQS(0.001)K;S(0.066)KS(0.934)EDMDNVQSK;S(0.002)KS(0.998)EDMDNVQSK;S(0.06)KS(0.94)EDMDNVQSK;SKS(1)EDMDNVQSK 184.76 2.5906999999999994e-19 180667300.0 25209.44 26124.579999999998 27382.91 24774.68 29723.260000000002 28507.49 28024.609999999997 30226.379999999997 35497.090000000004 38575.44 39532.979999999996 True False 27768.683790591153 28326.190040821486 29241.278939414486 26304.955716219363 27635.600757280357 28275.334453068175 29091.101869205027 29623.4911387636 34005.270751755656 36139.780135074216 34670.674080207864 0.8009271387787413 0.8170071910136816 0.8434009350890351 0.7587090938977686 0.7970886488490988 0.8155403724673891 0.8390694049358562 0.8544250126268671 0.9808078917960219 1.0423731610025144 1.0 15.081428265779241 -8.653222714591301 1.8722644982806629 0.9939431262437854 0.8078900151386362 0.9139138865001167 0.026392428501799382 0.05403590058557494 0.3719321603281653 0.004112446938111837 0.004604767489492798 2.2221700267313035e-09 8.653222714591301 -0.18605311110514922 SKS(ph)ETGDSSIFR ddPTM_A549_MK2206_60min_R1 1 SKSETGDSSIFR 12 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 S(0.131)KS(0.868)ET(0.001)GDSSIFR 76.391 0.00032366 5606500.0 2023.2 2551.8 1658.6 1707.9 3134.8 2199.6 2436.6 1816.2 2927.3 2826.6 2574.2 True False 2364.6666975090907 2681.67572038095 1893.8144201812868 2126.335576670543 2673.675072644451 2432.3602120236883 2879.2986801387365 2073.6519118792266 2264.2712239375346 2188.0690968410418 1934.9550956942685 1.2220783328621072 1.3859110872124687 0.9787381755759968 1.0989069366013409 1.381776289586259 1.2570628731572446 1.4880441859068747 1.0716796046035337 1.1701931631261482 1.1308113049806745 1.0 10.918084370943454 -9.790495952278267 0.6830469975235757 1.0132840922234219 1.240374795309998 0.15969805076963173 0.14510230808761349 0.6483054845778656 0.6345628747313655 0.06701754293501878 0.03240613229204853 1.6199590922144315e-10 9.790495952278267 0.22709070308657608 SKS(ph)ETGDSSIFR ddPTM_A549_PD325901_60min_R1 2 SKSETGDSSIFR 12 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 S(0.028)KS(0.972)ETGDSSIFR;S(0.018)KS(0.979)ET(0.003)GDSSIFR 97.836 7.047e-05 17577100.0 4339.7 4780.0 5385.700000000001 5959.1 5941.1 5772.6 5342.5 5934.0 6529.8 7406.099999999999 6986.8 True False 4780.26314928171 5182.827375411461 5751.205988845037 6327.18007290196 5523.817631682334 5725.589859499428 5545.811761028173 5815.641714867052 6255.375213991178 6938.477582067064 6127.467892974332 0.7801367926811484 0.8458350930494498 0.9385942267342254 1.0325929378033323 0.9014845492729329 0.9344136859638723 0.9050739812748627 0.9491101081957825 1.020874417173773 1.132356415938568 1.0 12.58107530426533 -3.2180870292431054 0.3385511172692036 1.0037211867027243 9.547415482216594e-22 0.5554600837744323 0.06098845966976747 11.417333917293629 0.3016655110151109 0.014299728646561533 6.327329581617037 0.000605219581294912 3.2180870292431054 -1.0037211867027243 SKS(ph)FSLR ddPTM_A549_MK2206_60min_R1 4 SKSFSLR 7 1 J3QQM5;Q9BT23 J3QQM5 LIMD2 LIM domain-containing protein 2 1 S(0.161)KS(0.819)FS(0.02)LR;S(0.178)KS(0.82)FS(0.002)LR;S(0.146)KS(0.686)FS(0.167)LR;S(0.141)KS(0.824)FS(0.035)LR 60.398 0.008034399999999999 83727400.0 6284.9 7332.8 7342.599999999999 6298.099999999999 8289.7 6641.3 5682.4 6331.599999999999 9322.6 9432.9 8918.400000000001 True False 7345.637468947641 7706.008199078862 8383.891089848732 7841.134782732452 7070.296111299185 7344.077957861853 6714.818525823017 7229.123689711771 7211.045985133073 7302.0013385664315 6703.715144681756 1.0957562053893564 1.14951307338771 1.250633553023193 1.1696700431779299 1.054683255285429 1.0955235715360183 1.0016563026473566 1.078375726547217 1.075679056985856 1.0892469594802685 1.0 12.710745131777193 -6.782462341297543 4.85783325292777 1.042386092658535 1.1720106548304567 0.5566966304145161 0.046125926978651824 0.09669116301910713 5.74832153846754 0.006991613520529691 0.013949222376327723 1.6502040882187925e-07 6.782462341297543 0.12962456217192164 SKS(ph)FSLR ddPTM_A549_PD325901_60min_R1 3 SKSFSLR 7 1 J3QQM5;Q9BT23 J3QQM5 LIMD2 LIM domain-containing protein 2 1 S(0.08)KS(0.788)FS(0.133)LR;S(0.012)KS(0.985)FS(0.003)LR;S(0.018)KS(0.972)FS(0.009)LR 75.294 0.0050742 151142200.0 6038.4 6031.9 7152.9 7039.7 8088.7 6972.499999999999 7292.799999999999 7253.599999999999 6454.3 6747.7 7888.099999999999 True False 6651.413922764865 6540.229381954891 7638.338807881915 7474.526280681298 7520.577616500124 6915.718271725003 7570.331494773286 7108.921257660885 6183.04821643285 6321.649070430312 6917.913706785772 0.9614768562725062 0.9454048805985523 1.104139070192431 1.0804596006090024 1.087116424872892 0.9996826449195781 1.0943084599837605 1.027610571477316 0.8937735390321372 0.9138086044972512 1.0 12.756121302482686 -8.628945043975175 7.624924843652957 0.9499583654725157 1.0412377954321534 0.38832037690349086 0.05614408341854313 0.21134676698196667 13.81270051015926 0.010665733326930544 0.012091866220456675 2.349930164368082e-09 8.628945043975175 0.09127942995963778 SKS(ph)IEEREEEYQR ddPTM_A549_MK2206_60min_R1 3 SKSIEEREEEYQR 13 2 H7C0E9;B5MCU0;H7C2F9;Q9UBL0;Q15032-2;Q15032-4;Q15032;Q15032-3 H7C0E9;Q15032-2 R3HDM2;R3HDM1;ARPP21 cAMP-regulated phosphoprotein 21;R3H domain-containing protein 1 1 S(0.346)KS(0.654)IEEREEEYQR;S(0.028)KS(0.972)IEEREEEYQR;S(0.203)KS(0.797)IEEREEEYQR 135.08 4.766899999999999e-09 89878000.0 8686.4 12331.2 8523.400000000001 7687.6 12024.1 9334.4 7029.200000000001 9856.5 11776.3 12648.7 10918.400000000001 True False 10152.451957909723 12958.8054091863 9732.146285405262 9571.062345109478 10255.37081822895 10322.160012326753 8306.314652561441 11253.689059265287 9108.986852886817 9791.349885096339 8207.05994748982 1.237038844953839 1.5789826676177539 1.18582614817891 1.1661986638755875 1.2495791286824482 1.2577171457708005 1.012093819919273 1.3712205261407036 1.1098964685487471 1.1930398885524265 1.0 13.002649775991673 -2.000000000314122 0.07556760679270116 0.7585627696521976 2.3794455598810944 0.17264316130402724 0.14052606813041296 112.25521988112125 0.6043939205241222 2.0520007296982627 19.12756130013166 0.009999999992767072 2.000000000314122 1.620882790228897 SKS(ph)IEEREEEYQR ddPTM_A549_PD325901_60min_R1 1 SKSIEEREEEYQR 13 2 H7C0E9;B5MCU0;H7C2F9;Q9UBL0;Q15032-2;Q15032-4;Q15032;Q15032-3 H7C0E9;Q15032-2 R3HDM2;R3HDM1;ARPP21 cAMP-regulated phosphoprotein 21;R3H domain-containing protein 1 1 S(0.456)KS(0.544)IEEREEEYQR 79.565 0.00024691 45046000.0 11752.0 12108.0 12602.0 12376.0 14175.0 14697.0 12877.0 12748.0 15399.0 14515.0 15547.0 True False 12945.05438863486 13128.3836530297 13457.247501982121 13140.437412064686 13179.396901095262 14577.312504774822 13367.041281564781 12493.731139387462 14751.833581464987 13598.520422854606 13634.817560553036 0.9494116317394864 0.962857302250343 0.9869767191396354 0.9637413448113421 0.9665986979704552 1.0691241331272758 0.9803608462086827 0.9163108405302864 1.0819237966295638 0.9973379080770804 1.0 13.73500777608086 -7.340519438155827 0.5858995953649647 1.0324284193281492 0.9576690493269584 0.04234989058631633 0.045706770056714856 1.0020756263376729 0.6567830493780216 0.011349134398480676 0.03259392166076546 4.5654181584276486e-08 7.340519438155827 -0.07475937000119082 SKS(ph)ISSSNPDLAVAPGSVDDEVSR ddPTM_A549_MK2206_60min_R1 1 SKSISSSNPDLAVAPGSVDDEVSR 24 1 Q96HP0;K7EP20;K7ESB7;K7EKT0 Q96HP0;K7ESB7 DOCK6 Dedicator of cytokinesis protein 6 1 S(0.199)KS(0.6)IS(0.067)S(0.067)S(0.067)NPDLAVAPGSVDDEVSR 103.14 3.023e-11 13410000.0 1957.2 2029.0 1863.1 1688.0 2669.2 2565.8 1398.4 1718.9 2923.0 2769.4 2721.1 True False 2287.5275110541656 2132.2674334402977 2127.315595224739 2101.5600757772004 2276.5642158678597 2837.3112529598034 1652.4711788172074 1962.5593389104756 2260.945167071846 2143.790616568168 2045.3757714605213 1.118389854310601 1.0424820041344924 1.0400610122147422 1.027468939986788 1.113029814684006 1.3871833687233874 0.8079059123875529 0.9595104069845759 1.1053935411865152 1.0481157772966934 1.0 10.998150200602087 -11.05220189133477 1.2452274126418115 0.9985341108872701 1.06897243261999 0.010574761489688944 0.13225943293561046 1.6657311810257587 4.4403804285088935 0.10345033050763626 0.021037581544418475 8.867436939129838e-12 11.05220189133477 0.07043832173272002 SKS(ph)KHELK ddPTM_A549_MK2206_60min_R1 1 SKSKHELK 8 2 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 S(0.358)KS(0.642)KHELK 47.302 0.0077727000000000004 14271000.0 4090.0 4400.4 3781.2 3635.3 6760.5 7253.5 6705.1 7475.4 9429.9 6939.1 7131.1 True False 4780.292009100521 4624.361564371947 4317.431017478283 4525.948663194819 5766.0394055802 8021.060555516383 7923.329877779789 8535.060842452362 7294.042706455968 5371.552490585749 5360.251061652321 0.8918037521225683 0.8627136138183921 0.8054531341573795 0.8443538578955433 1.0757032346546083 1.4963964305514927 1.4781639491597596 1.5922875149473672 1.3607651250961268 1.0021083767912065 1.0 12.388084859397038 -6.934671511779156 4.0316037826834865 1.2567095252222407 0.8508517666471209 0.5799081764252261 0.18266543651857897 0.1683181019721516 5.525404258717075 0.03276273822751305 0.06332081565535484 1.1623274334602482e-07 6.934671511779156 -0.40585775857511974 SKS(ph)KITVTSEVPFSK ddPTM_A549_MK2206_60min_R1 1 SKSKITVTSEVPFSK 15 2 K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1;K7ERI7;P35268 K7EJT5 RPL22 60S ribosomal protein L22 1 S(0.176)KS(0.206)KIT(0.206)VT(0.206)S(0.206)EVPFSK 40.856 0.020406999999999998 3098100.0 1103.8 1412.3 1171.6 1454.4 1933.2 1356.9 1400.6 1192.1 1795.4 1695.1 1939.3 True False 1290.0944546809678 1484.1800375789715 1337.750497217168 1810.7280652904963 1648.828840894555 1500.4862573626765 1655.0708903399461 1361.0838256531374 1388.7447666646565 1312.1757327019218 1457.7182880428463 0.8850094461070851 1.0181528555641934 0.9177016630649885 1.2421659796294426 1.1311025281217377 1.0293389811122224 1.1353845965409874 0.9337084104779588 0.9526839157168051 0.9001572824222902 1.0 10.509496222630862 -8.28099564377926 24.82910619121138 0.973735894028596 1.0544242443329161 0.19117395210075794 0.0977796351256741 1150.4781063401135 1460670.2816744468 0.015755193156374116 0.0190604516338658 5.2360568862236564e-09 8.28099564377926 0.0806883503043202 SKS(ph)LDSR ddPTM_A549_MK2206_60min_R1 2 SKSLDSR 7 1 Q9P2M7-2;Q9P2M7;A6PVU7 Q9P2M7-2 CGN Cingulin 1 S(0.161)KS(0.833)LDS(0.006)R;S(0.074)KS(0.887)LDS(0.039)R 58.592 0.0090256 38099000.0 9959.8 8389.599999999999 6625.0 5426.0 6436.200000000001 5832.9 5764.6 5696.1 6300.700000000001 11436.6 12387.4 True False 11640.770746268794 8816.594805121105 7564.5246193784005 6755.370243582396 5489.443505982587 6450.133606434345 6811.9532018089785 6503.539618574645 4873.601510150387 8853.064116936344 9311.266705152359 1.2501812175380405 0.9468738340662578 0.8124055361009686 0.7255049669927652 0.5895485200681688 0.6927235370527175 0.7315817941332952 0.6984591704344515 0.523409076818044 0.9507905204817655 1.0 13.184761730097224 -5.322701984688956 1.5562202118907926 0.7407903779789841 1.4029947513445362 0.5732525552979448 0.13044779735967696 0.6905229597949706 1.685364382559881 0.02483726503721994 0.6688770751993017 4.756615155808458e-06 5.322701984688956 0.6622043733655522 SKS(ph)LDSR ddPTM_A549_PD325901_60min_R1 2 SKSLDSR 7 1 Q9P2M7-2;Q9P2M7;A6PVU7 Q9P2M7-2 CGN Cingulin 1 S(0.157)KS(0.837)LDS(0.006)R;S(0.009)KS(0.989)LDS(0.002)R 82.26100000000001 0.0041945 45688000.0 12679.7 12146.8 9791.8 9150.0 11394.6 8545.2 8197.4 8697.8 10330.3 11672.4 13862.900000000001 True False 13966.933809698214 13170.4534651983 10456.33043087673 9715.174718842272 10594.282605235987 8475.610724352031 8509.356542789394 8524.3155557079 9896.153415585934 10935.402671975757 12157.851184163546 1.1487995368697328 1.0832879318636288 0.8600475752242167 0.7990864974146886 0.8713943315111294 0.6971306521165606 0.6999062921475324 0.7011366915570919 0.813972244410786 0.899451926687496 1.0 13.569600644523856 -5.7113550730319735 3.965651183223867 0.8545959660193116 1.1330232234905293 0.5732945098754628 0.09579930130586675 0.16089903797458913 5.112347767319308 0.017362201004216406 0.07323605080480282 1.9437702327147543e-06 5.7113550730319735 0.27842725747121766 SKS(ph)LGDLTSEDIACNFESK ddPTM_A549_PD325901_60min_R1 1 SKSLGDLTSEDIACNFESK 19 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 S(0.19)KS(0.809)LGDLT(0.001)SEDIACNFESK 102.21 6.1635e-10 4571000.0 1414.5 1560.9 1724.0 1955.7 1878.7 1736.8 1548.9 1666.9 1578.6 1985.4 1835.2 True False 1558.0989987001356 1692.442520979027 1841.0010072541818 2076.4991472830407 1746.746593163152 1722.6560766342056 1607.8442370906014 1633.6523718422475 1512.2569317293735 1860.0415051695165 1609.4820342913056 0.9680748001553212 1.0515448354937686 1.14384688243185 1.290166092594736 1.0852849276645 1.0703170584894 0.9989824072802246 1.0150174634049796 0.9395923033059871 1.1556770846395552 1.0 10.652380757604737 -7.70543661937323 1.846065908259334 0.9741216350125989 1.1158954524714884 0.0752230201837849 0.09258504569744767 0.25958302319036713 1.808608072743213 0.012812897912075159 0.020076439686039674 1.9704407509513445e-08 7.70543661937323 0.1417738174588895 SKS(ph)LKEGLTVQER ddPTM_A549_MK2206_60min_R1 4 SKSLKEGLTVQER 13 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.189)KS(0.811)LKEGLTVQER;S(0.019)KS(0.979)LKEGLT(0.002)VQER;S(0.161)KS(0.839)LKEGLTVQER;S(0.015)KS(0.985)LKEGLTVQER 134.52 5.2548000000000005e-09 820920000.0 36298.0 39614.6 39716.8 35535.3 50522.6 35183.0 34535.3 32623.8 53536.399999999994 51953.9 53181.5 True False 42424.21499910288 41630.81393236273 45349.23945704577 44241.45009524022 43090.792466883504 38906.04170741472 40809.91697783606 37248.323556197305 41410.49088006335 40217.47790644938 39975.06581526874 1.061266920613766 1.0414195219776616 1.1344381436821631 1.106726135228573 1.0779417516412115 0.9732577273845113 1.020884297387409 0.931788923833868 1.0359080100437594 1.0060640823532565 1.0 15.28681278852169 -7.167334856762674 6.516158944816093 1.00790802641828 1.0867284619900506 0.6089692416579311 0.03493520584034897 0.15346840765428926 9.014302727434387 0.005353069801390521 0.009318907187618844 6.80244663186738e-08 7.167334856762674 0.07882043557177054 SKS(ph)LKEGLTVQER ddPTM_A549_PD325901_60min_R1 4 SKSLKEGLTVQER 13 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.004)KS(0.993)LKEGLT(0.003)VQER;S(0.004)KS(0.996)LKEGLTVQER;S(0.036)KS(0.961)LKEGLT(0.003)VQER;S(0.072)KS(0.927)LKEGLTVQER 139.11 2.0166e-09 1485150000.0 27363.3 31560.3 29898.5 36823.5 36101.3 34867.3 30245.100000000002 36273.2 38854.0 34429.5 33477.7 True False 30141.202072203192 34219.99724188249 31927.592004286038 39098.00396276375 33565.66923072386 34583.3522690165 31396.093831253784 35549.70257022509 37221.1014984246 32255.615494224774 29360.155132625343 1.0266022756368185 1.1655250827968833 1.0874462978844321 1.3316688480067873 1.1432388241513514 1.1779008698284117 1.0693435947266532 1.2108145345159247 1.2677419901322007 1.0986187010429642 1.0 14.841571970635139 -11.019466235547872 1.3226141911496327 1.0005119248910088 1.1767752198481347 0.166924888198677 0.08787244020958891 0.3803377263758924 1.1907011978971878 0.05929754271080967 0.013569612830564454 9.561670298370787e-12 11.019466235547872 0.1762632949571259 SKS(ph)LQLTGK ddPTM_A549_MK2206_60min_R1 1 SKSLQLTGK 9 1 A0A087WV04;B4DYM4;Q9UBS9;Q9UBS9-2 A0A087WV04 SUCO SUN domain-containing ossification factor 1 S(0.111)KS(0.886)LQLT(0.003)GK 63.727 0.0018392 7353900.0 2753.6 2895.0 3391.7 2798.3 4491.9 2660.8 2511.6 2590.9 3614.4 4062.3 3771.4 True False 3218.3403609435677 3042.34313445523 3872.6940606106778 3483.8836256204604 3831.1474603839465 2942.3640899039074 2967.925209323011 2958.168009298476 2795.7441710107696 3144.62360861012 2834.857294655181 1.135274204811439 1.0731909292898947 1.3660984162808572 1.228944974475064 1.3514427931194857 1.0379231771036304 1.046939898850893 1.0434980324673784 0.9862027892133566 1.1092705140886527 1.0 11.469060397087034 -7.401259234054063 6.062223554877243 1.0031898937790324 1.2290724595863436 0.5397224420633486 0.08641232860873028 0.11289623952588705 5.1859243324494315 0.01208985653515473 0.01938700895199559 3.969545332154947e-08 7.401259234054063 0.22588256580731114 SKS(ph)LQLTGK ddPTM_A549_PD325901_60min_R1 2 SKSLQLTGK 9 1 A0A087WV04;B4DYM4;Q9UBS9;Q9UBS9-2 A0A087WV04 SUCO SUN domain-containing ossification factor 1 S(0.035)KS(0.963)LQLT(0.002)GK;S(0.014)KS(0.986)LQLTGK 93.01100000000001 0.00027568 34519000.0 10771.7 10802.599999999999 11591.400000000001 11703.4 14205.9 12477.9 13289.5 13031.1 12797.7 12826.4 13093.099999999999 True False 11865.23505429358 11712.97301372799 12378.062108750639 12426.29243765012 13208.126591694481 12376.28411943456 13795.239194793432 12771.184487799806 12259.857174200566 12016.538915032885 11482.731703999294 1.0333111806627917 1.0200510919930756 1.0779718997039278 1.0821721484028226 1.150259967068137 1.077817059430558 1.2013900133178868 1.1122078628164551 1.0676777521441705 1.046487824046927 1.0 13.487178274785911 -9.837876552544245 0.9955568045923882 1.010102744510213 1.0937386072993371 0.21264572874818066 0.04944878185609892 0.42045438938728796 0.8542403104266716 0.01718550278111691 0.010117760006541932 1.4525244364736552e-10 9.837876552544245 0.08363586278912405 SKS(ph)MDLGIADETK ddPTM_A549_MK2206_60min_R1 3 SKSMDLGIADETK 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.299)KS(0.701)MDLGIADETK;S(0.008)KS(0.992)MDLGIADETK;S(0.069)KS(0.93)MDLGIADET(0.001)K 117.29 4.3208e-06 43012400.0 8830.6 9521.0 8911.6 8590.2 12974.8 10398.6 9836.0 10698.9 14868.6 12976.7 14859.0 True False 10320.989392558206 10005.578232520978 10175.398882724914 10694.799385628732 11066.224107613623 11498.972949967969 11623.073880753755 12215.501839007085 11500.885840275205 10045.254457290437 11169.100212462567 0.9240663255077582 0.8958267042278553 0.9110312101391236 0.9575345535619239 0.990789221791192 1.0295344057471458 1.0406455005018793 1.0936871911469588 1.0297056720327775 0.8993790248279684 1.0 13.447225345916316 -6.658479652023481 1.6943090741843112 1.0240224608125008 0.9075885528098 0.5005484719595932 0.04470327091856773 0.13405503526513318 0.7726001789511839 0.004309720877995308 0.011293644057481922 2.1954338092749771e-07 6.658479652023481 -0.11643390800270081 SKS(ph)MDLGIADETK ddPTM_A549_PD325901_60min_R1 3 SKSMDLGIADETK 13 1 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.262)KS(0.738)MDLGIADETK;S(0.433)KS(0.567)MDLGIADETK;S(0.333)KS(0.667)MDLGIADETK 96.37899999999999 4.6456000000000004e-05 49342400.0 10945.1 13119.1 11164.5 12944.3 14501.5 13417.1 12514.099999999999 13852.3 12654.0 13500.2 13486.4 True False 12056.238494643236 14224.69259848546 11922.190107592405 13743.840012361734 13482.964667459124 13307.835586025334 12990.33092347828 13576.005009580873 12122.196385470359 12647.795068041452 11827.658297333412 1.0193259047195637 1.202663472421457 1.007992436700704 1.162008545297621 1.1399521636923606 1.1251454219831185 1.0983011680686612 1.1478185003570514 1.0249024854060378 1.0693405871298247 1.0 13.529876849065243 -8.849637030504002 5.837365834409743 1.010970443640027 1.1147293282197768 0.2689324668575934 0.05735687912446974 0.1290738430470345 6.795928562702262 0.008525515391333009 0.009050498676695 1.4137185919863496e-09 8.849637030504002 0.10375888457974969 SKS(ph)MNVK ddPTM_A549_MK2206_60min_R1 1 SKSMNVK 7 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.181)KS(0.819)MNVK 44.863 0.021244 4951800.0 3698.2 4514.2 3551.7 3700.2 5680.4 4362.6 3547.7 4314.8 6062.0 5487.9 5832.1 True False 4322.365747690843 4743.953498292847 4055.3844665126435 4606.749166108287 4844.8206847803785 4824.2474363404945 4192.27116782738 4926.436113520811 4688.966679024809 4248.179578487919 4383.828612228476 0.9859796378977532 1.0821484866127795 0.9250782421558056 1.050850654438904 1.1051574122368715 1.1004644257495586 0.9563036192001767 1.1237747980791852 1.0696053823694578 0.9690569486767409 1.0 12.097975681244888 SKS(ph)MSDVSAEDVQNLR ddPTM_A549_MK2206_60min_R1 1 SKSMSDVSAEDVQNLR 16 1 E9PMS6;E9PJ10 E9PMS6 LMO7 1 S(0.205)KS(0.779)MS(0.015)DVS(0.001)AEDVQNLR 99.603 5.3211e-07 7613500.0 2897.2 2825.2 2593.9 2385.8 3380.1 2842.4 2639.2 2661.5 3969.5 3578.9 3952.8 True False 3386.176530260644 2968.9906125951356 2961.7540241819847 2970.321107102631 2882.891767591395 3143.1808813675807 3118.708477641857 3038.775775501906 3070.414587988948 2770.4240043460013 2971.2106682698736 1.1396622146057398 0.9992528110852433 0.9968172421468198 0.9997006064979698 0.9702751132319047 1.0578788353630424 1.0496423262568153 1.0227399248237674 1.0333883829842467 0.932422609386769 1.0 11.536835185120895 -9.026146245005707 0.0033050217309974843 0.0001935766405147661 2.039719646592357 0.12401361147633372 0.047816701023501475 27436.59562799463 60.84653607414123 18831.96380755581 18714.06347987501 9.415724765380169e-10 9.026146245005707 2.039526069951842 SKS(ph)MSDVSAEDVQNLR ddPTM_A549_PD325901_60min_R1 1 SKSMSDVSAEDVQNLR 16 1 E9PMS6;E9PJ10 E9PMS6 LMO7 1 S(0.028)KS(0.952)MS(0.02)DVSAEDVQNLR 134.29 7.946500000000001e-11 7325300.0 3117.9 3604.3 3458.1 3551.3 4309.3 3542.4 3724.8 3602.9 4008.7 3999.4 4203.0 True False 3434.4269127233315 3908.047010291948 3692.7874612445935 3770.655735412518 4006.6296342779397 3513.5518688789775 3866.549302288768 3531.0373330796265 3840.2282796297604 3746.8772014581245 3686.057645012181 0.9317344554745784 1.0602240623068262 1.0018257490469578 1.0229508321756202 1.0869687943430681 0.9532004670717423 1.0489660430353878 0.9579441433472096 1.0418253455222537 1.0164998929217077 1.0 11.847862917628248 -5.242749523178307 23.770163478852968 1.0190773823446124 0.9317343036722623 0.296093258010649 0.03869854337039917 1813.3746551768575 2306218.8756281706 0.004775248898734122 0.2079813787437268 5.718083287234245e-06 5.242749523178307 -0.08734307867235014 SKS(ph)NPDFLK ddPTM_A549_MK2206_60min_R1 6 SKSNPDFLK 9 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.012)KS(0.988)NPDFLK;S(0.003)KS(0.997)NPDFLK;S(0.173)KS(0.827)NPDFLK;S(0.009)KS(0.991)NPDFLK;S(0.002)KS(0.998)NPDFLK;S(0.009)KS(0.991)NPDFLK 117.2 0.00015104 467336600.0 29905.8 33972.6 32955.9 28568.700000000004 41370.1 35510.1 32809.700000000004 37698.5 44280.9 40561.9 40014.5 True False 34953.16791338835 35701.660231293165 37629.54217415439 35568.03278249769 35284.61309264008 39267.75521230331 38770.79779436424 43042.37782181428 34251.34685206696 31398.938618536988 30077.795305981774 1.1620920867972322 1.186977298970877 1.2510738167923747 1.1825345714559086 1.173111683675259 1.3055396784515607 1.289017276696927 1.431035000535899 1.1387585593833458 1.0439242071805865 1.0 14.876411201295845 -9.398063560907868 1.57050021601912 1.0388073452127156 1.2427050666465749 0.5279576736418407 0.07906564725049714 0.19382119997726205 0.9815075097799146 0.01935741979105601 0.016237712782422246 3.9988622037075255e-10 9.398063560907868 0.2038977214338593 SKS(ph)NPDFLK ddPTM_A549_PD325901_60min_R1 6 SKSNPDFLK 9 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.004)KS(0.996)NPDFLK;SKS(1)NPDFLK;S(0.003)KS(0.997)NPDFLK;S(0.004)KS(0.996)NPDFLK;S(0.007)KS(0.993)NPDFLK;S(0.014)KS(0.986)NPDFLK 137.16 3.6495e-05 809842000.0 40099.3 39563.899999999994 42059.700000000004 40942.700000000004 45832.00000000001 39777.1 43510.600000000006 44787.5 42577.299999999996 43950.90000000001 46600.2 True False 44170.151416455585 42898.088702519104 44914.12416752245 43471.63759138177 42612.91843181645 39453.16848565546 45166.41969291392 43894.178177385955 40787.92414754916 41175.832673292505 40868.67082300658 1.0807826759951897 1.049657056093199 1.0989866629633214 1.063691006239182 1.0426793329385198 0.9653646103764578 1.1051599864482986 1.0740299915180065 0.9980242402350907 1.0075158267714694 1.0 15.318707702716202 -8.170944341345473 0.37829688107819054 0.9916629381225103 1.0772940324211562 0.25789752080680794 0.0376435549467644 0.9810310522768495 0.34996603353712485 0.019059115967271976 0.02941706349933318 6.746144799322535e-09 8.170944341345473 0.0856310942986459 SKS(ph)NPDFLKK ddPTM_A549_MK2206_60min_R1 4 SKSNPDFLKK 10 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.089)KS(0.911)NPDFLKK;S(0.048)KS(0.952)NPDFLKK;S(0.111)KS(0.889)NPDFLKK;S(0.039)KS(0.961)NPDFLKK 108.36 4.9714e-05 1628360000.0 37081.7 42363.6 44751.7 38980.5 56596.299999999996 37396.1 40507.1 38164.9 59496.700000000004 55632.899999999994 61670.4 True False 43340.18439947743 44519.72629043436 51098.16398626968 48530.72424990115 48271.059242665266 41353.33048047786 47866.7157376048 43574.89145010435 46020.7924467066 43065.38925127291 46355.93766354745 0.9349435387121618 0.9603888635272496 1.1023002998481324 1.0469149519127054 1.0413134039703353 0.8920827096761879 1.0325908211591495 0.9400066883852506 0.9927701771610502 0.9290156001986752 1.0 15.500466522911854 SKS(ph)NPDFLKK ddPTM_A549_PD325901_60min_R1 5 SKSNPDFLKK 10 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.008)KS(0.992)NPDFLKK;S(0.037)KS(0.963)NPDFLKK;S(0.021)KS(0.979)NPDFLKK;S(0.181)KS(0.819)NPDFLKK;S(0.439)KS(0.561)NPDFLKK 97.417 0.00010596 2584698100.0 52029.2 49405.49999999999 55340.4 52492.600000000006 59702.9 53647.1 57259.0 59918.4 60090.2 54730.899999999994 60764.5 True False 57311.16608212736 53569.07487361733 59096.13233285923 55734.948682655726 55509.57426782366 53210.21580423931 59438.02257832706 58723.280506924544 57564.81786329941 51275.18163356615 53290.85171790214 1.0754409853591187 1.0052208427290292 1.1089357821805448 1.0458633496362855 1.0416342107209402 0.9984868713660334 1.1153513344647836 1.1019392374844983 1.0802007475508504 0.9621760580032378 1.0 15.701600270620267 -10.811191327737646 1.1066982669019043 1.0006938967239059 1.0636886917674049 0.37525821386805636 0.039116118529482546 0.5140397173262183 1.1368306998443671 0.02427538892807156 0.0063141578530918055 1.5445738301044727e-11 10.811191327737646 0.06299479504349903 SKS(ph)PASVDR ddPTM_A549_MK2206_60min_R1 2 SKSPASVDR 9 1 Q13243-3;Q13243 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 1 S(0.049)KS(0.823)PAS(0.128)VDR;S(0.194)KS(0.754)PAS(0.052)VDR 78.505 0.00050957 199676000.0 8271.199999999999 8447.6 7026.400000000001 6733.9 9923.300000000001 7546.1 7215.400000000001 7861.400000000001 10380.5 11147.900000000001 9492.6 True False 9667.17634857512 8877.546757383076 8022.849175184964 8383.705802296257 8463.595715316023 8344.623293304221 8526.344782349597 8975.777524527788 8029.33332425224 8629.581647447205 7135.32543756795 1.3548332774952088 1.2441684454421964 1.1243844790798392 1.1749577332738748 1.186154127007949 1.169480406509455 1.194948269276947 1.25793526911467 1.1252932181589477 1.2094166864501932 1.0 12.80076351624936 -14.999999999999861 0.1030351660680182 0.30394384348232006 1.334545957820189 0.0 0.08617414591387247 46.10336372132981 0.34011894763797645 6.735997549881741 0.3797566845369608 1.000000000000319e-15 14.999999999999861 1.030602114337869 SKS(ph)PASVDR ddPTM_A549_PD325901_60min_R1 5 SKSPASVDR 9 1 Q13243-3;Q13243 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 1 S(0.012)KS(0.966)PAS(0.022)VDR;S(0.015)KS(0.922)PAS(0.063)VDR;S(0.06)KS(0.55)PAS(0.389)VDR;S(0.489)KS(0.507)PAS(0.005)VDR;S(0.02)KS(0.615)PAS(0.365)VDR 74.733 0.00059366 513739000.0 40145.7 37458.2 39855.1 38573.8 47237.5 41438.5 43301.3 44692.0 42804.8 44401.700000000004 47204.100000000006 True False 44221.26191029765 40614.93397356432 42559.90675418565 40956.41601854402 43919.700960528215 41101.038594890866 44949.154666880546 43800.58299980427 41005.86311370172 41598.16908435847 41398.29495144412 1.068190416106861 0.9810774579291587 1.028059411724661 0.9893261562241059 1.0609060351891653 0.9928195990462432 1.085773090886985 1.0580286712575429 0.9905205796953067 1.0048280764497375 1.0 15.337283729019173 -8.786639737120096 24.9933617756372 0.9955236007659543 1.0310168132996724 0.17727561403892667 0.03280049891341767 254.57614641143311 252483.89438005586 0.005404284966522143 0.005754594823773973 1.634407185203128e-09 8.786639737120096 0.03549321253371818 SKS(ph)PFR ddPTM_A549_PD325901_60min_R1 2 SKSPFR 6 1 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 SKS(1)PFR;S(0.025)KS(0.975)PFR 79.47399999999999 0.012107999999999999 38426000.0 4295.4 4307.8 4822.2 4624.9 4566.3 4488.2 4873.4 4673.4 4632.6 5211.1 4976.0 True False 4731.465845893651 4670.833424225416 5149.463490244264 4910.5695690900075 4245.578840879809 4451.649587257966 5058.859903826802 4580.185370788625 4437.907932300454 4882.070256668112 4363.983545462916 1.084207994050022 1.0703141695118263 1.1799915001049868 1.1252493319309966 0.9728677472429501 1.020088536283826 1.1592298300680637 1.0495423099270131 1.0169396575553993 1.118718759089693 1.0 12.091429946606878 -8.162588781651895 0.3597091830890115 0.9937262616441519 1.11237991543149 0.0 0.06658293680799221 1.1638443299729886 0.3840674337214051 0.03130395330938669 0.048585906896630185 6.877193093305604e-09 8.162588781651895 0.11865365378733805 SKS(ph)PIPGQGYLGTER ddPTM_A549_PD325901_60min_R1 3 SKSPIPGQGYLGTER 15 1 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KRE4 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.229)KS(0.77)PIPGQGYLGTER;S(0.039)KS(0.957)PIPGQGY(0.004)LGTER;S(0.226)KS(0.769)PIPGQGY(0.004)LGT(0.002)ER 61.276 0.0014734000000000001 16883100.0 6270.799999999999 6989.4 7006.200000000001 6717.2 8011.6 7269.5 7049.900000000001 7077.0 7106.400000000001 7717.199999999999 8075.200000000001 True False 6907.4069996810285 7578.421267301433 7481.682863703153 7132.106188131945 7448.892854519568 7210.299602195047 7318.187802353308 6935.8436832009 6807.742721171687 7229.934674974411 7082.001592910393 0.9753467164700801 1.0700959563307628 1.0564362017643247 1.007074920072273 1.0518061534999457 1.0181160661433752 1.0333502056366883 0.9793620620114224 0.9612738195352484 1.0208885976829079 1.0 12.789941452887339 -8.261011030967767 24.855096247372803 0.9810253727587455 1.032315691865593 0.29459103647879725 0.028310437375620213 23.760079460402913 1378673.8304609298 0.004225881957656341 0.00528919195124038 5.482630390042904e-09 8.261011030967767 0.05129031910684745 SKS(ph)PPKSPEEEGAVSS ddPTM_A549_PD325901_60min_R1 1 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.168)KS(0.811)PPKS(0.004)PEEEGAVS(0.013)S(0.003) 103.31 3.4919e-07 24902000.0 5514.6 5313.2 6009.2 6473.6 7977.4 7163.0 6744.3 6501.1 7608.2 5875.5 7243.2 True False 6074.438132366045 5760.962010677022 6417.020448255116 6873.459569387681 7417.094944535971 7104.666902885085 7000.958027122571 6371.430460485709 7288.453812228192 5504.519927280899 6352.332318427847 0.9562532039994754 0.9069050109303499 1.010183366767449 1.0820371518423344 1.1676175887428453 1.1184343870478481 1.1021082771147046 1.0030064771646878 1.1473665807887121 0.8665352584455507 1.0 12.633070672836752 -6.004391380807398 3.2528473023470013 1.0794600914201382 0.9323662882098365 0.24849284989451315 0.08169512240899703 0.1642196702364355 3.5904315684589245 0.00899093186129592 0.029935978107562218 9.899394216435174e-07 6.004391380807398 -0.14709380321030174 SKS(ph)PRDPDANWDS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 SKSPRDPDANWDSPSR 16 2 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 2 S(0.451)KS(0.557)PRDPDANWDS(0.821)PS(0.171)R 53.266000000000005 0.013266 10730000.0 2117.5 1965.1 2247.5 1793.6 3384.9 2557.9 2118.5 2436.4 3711.4 3243.1 3400.8 True False 2474.8822320954396 2065.1151963792636 2566.22929540422 2233.0320805177635 2886.9856939499155 2828.5752802033985 2503.4040276918295 2781.767161162068 2870.7738258879403 2510.4814575692303 2556.2875026948445 0.9681548845685052 0.8078571734213049 1.003889152804172 0.8735449663481496 1.1293665876418235 1.10651688326196 0.9793123915258886 1.0882059072891928 1.1230246296089792 0.9820810276319368 1.0 11.319834388312557 -6.755121544193715 24.99817498434018 1.0634362284941583 0.9122917603608733 0.5062902784705843 0.0687587446871067 92.60108573910308 366396.7581974726 0.009740922197109389 0.01989215226622144 1.757431700012887e-07 6.755121544193715 -0.15114446813328497 SKS(ph)PRDPDANWDSPSR ddPTM_A549_MK2206_60min_R1 4 SKSPRDPDANWDSPSR 16 2 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.031)KS(0.969)PRDPDANWDSPSR;S(0.151)KS(0.849)PRDPDANWDSPSR;S(0.032)KS(0.968)PRDPDANWDSPSR;S(0.032)KS(0.968)PRDPDANWDSPSR 174.04 7.8227e-29 144250000.0 12718.0 12981.5 10441.8 10831.9 19039.6 14087.9 13789.499999999998 12035.099999999999 19701.2 21578.8 20628.5 True False 14864.48747475317 13642.202901530422 11922.604252169878 13485.715986262472 16238.900061605606 15578.672227208821 16294.873655820847 13741.112280947968 15238.909656351641 16704.134092872537 15505.874132363151 0.958635891654034 0.8798086960513267 0.7689088761068661 0.8697165907025972 1.0472740796800688 1.0046948720352198 1.0508839112663073 0.8861875289099727 0.9827830102493664 1.0772778077701812 1.0 13.920527238674945 -6.734586699770997 16.831126897954345 0.9922875667121003 0.8628461799110411 0.5168460620254378 0.06294021898781339 3.5776112959345308 2241.3553981409636 0.007977489434019602 0.016580449638312733 1.8425246224285653e-07 6.734586699770997 -0.1294413868010592 SKS(ph)PRDPDANWDSPSR ddPTM_A549_PD325901_60min_R1 3 SKSPRDPDANWDSPSR 16 2 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.028)KS(0.972)PRDPDANWDSPSR;S(0.141)KS(0.859)PRDPDANWDSPSR;S(0.415)KS(0.579)PRDPDANWDS(0.006)PSR 162.32 3.0308000000000004e-21 106341000.0 15510.400000000001 13396.4 15151.400000000001 15174.0 16314.599999999999 16724.1 15785.1 14246.3 21398.1 19994.2 22447.5 True False 17085.00438984701 14525.361642669888 16179.665116769718 16111.263517345637 15168.718778314547 16587.904474457675 16385.810618438154 13962.14637049386 20498.812270897197 18731.762799768472 19686.59980642659 0.8678494284355645 0.7378298835499342 0.8218618388071234 0.8183873129826206 0.7705098354954518 0.8425987543589237 0.8323332002253172 0.7092208155689733 1.0412571227361194 0.9514981248134877 1.0 14.264926335582894 -8.772941299066817 24.999993765078106 1.0194825508170282 0.8008431338247554 0.7578437557897673 0.04930022882119691 54.913352827446154 119356.52977803229 0.007331154094518552 0.007837001035421634 1.6867810018693181e-09 8.772941299066817 -0.21863941699227285 SKS(ph)PS(ph)PPR ddPTM_A549_MK2206_60min_R1 3 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 S(0.11)KS(0.896)PS(0.994)PPR;S(0.182)KS(0.919)PS(0.899)PPR;S(0.16)KS(0.889)PS(0.951)PPR 42.743 0.022162 55201100.0 6114.32 6280.8099999999995 5686.49 4923.46 7835.869999999999 6063.0599999999995 5863.29 5557.25 8150.67 8965.11 8841.0 True False 7146.267735228235 6600.476401491448 6492.9197891092945 6129.7079210225165 6683.223903114217 6704.648984866499 6928.573897344923 6345.0072058643555 6304.556258945423 6939.885424460696 6645.535700813082 1.075348633572744 0.9932196136850004 0.9770348217849292 0.922379804576559 1.0056712060543929 1.0088951871925365 1.0425907269593346 0.9547773861312705 0.9486904506696217 1.0442928511559422 1.0 12.698169785405902 SKS(ph)PS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 S(0.014)KS(0.988)PS(0.997)PPR;S(0.059)KS(0.941)PS(0.999)PPR 77.744 0.0012834 114600000.0 17587.8 17523.1 17909.300000000003 16846.6 20862.2 17530.9 17296.1 16395.9 18793.1 18796.5 21351.0 True False 19373.30050854595 18999.833134324785 19124.732795369666 17887.17622059543 19396.911042682877 17388.134162751383 17954.312550289073 16068.87091216528 18003.29136176567 17609.685782169247 18724.962355140397 1.0346242700577486 1.0146793768644844 1.0213495991418922 0.9552583274318318 1.035885182292931 0.9286071626188329 0.9588437194032722 0.8581523747498502 0.9614594155284584 0.9404390485909317 1.0 14.192675197827235 -7.252375309300974 24.852312685242214 0.9658349027747867 1.0098154191468505 0.3443615364859015 0.04187637804475416 873.596279011742 2395268.239000103 0.006750211413007307 0.011581081314534294 5.592740782305412e-08 7.252375309300974 0.043980516372063794 SKS(ph)PS(ph)PPRLTEDR ddPTM_A549_PD325901_60min_R1 1 SKSPSPPRLTEDR 13 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 S(0.471)KS(0.591)PS(0.818)PPRLT(0.12)EDR 49.463 0.025083 80139000.0 4865.6 6247.5 6393.6 6198.3 7058.8 6342.6 6140.8 6929.5 7257.3 6762.2 7483.3 True False 5359.552130134598 6773.998750603157 6827.508143840097 6581.15491363935 6563.014239538007 6290.947968482332 6374.491504374694 6791.285686412412 6952.300918940573 6335.233537955726 6562.901540547146 0.8166436898408466 1.0321652258154115 1.0403185392403267 1.00278129619642 1.0000171721288464 0.9585619911582367 0.9712916558311273 1.0347992643885109 1.0593334176945404 0.9653098555288642 1.0 12.680118073998143 -8.26434728913852 24.386670012307494 1.0293099837166646 0.9807378045122654 0.06978364331068754 0.06063809107601158 278.12602552299785 2332452.2677798048 0.00928888832507144 0.011469109860898708 5.440674083776774e-09 8.26434728913852 -0.04857217920439916 SKS(ph)PSPPR ddPTM_A549_MK2206_60min_R1 2 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.025)KS(0.96)PS(0.015)PPR;S(0.005)KS(0.63)PS(0.365)PPR 98.898 0.00067568 71777000.0 9578.9 9280.1 8424.7 8937.099999999999 13036.8 9430.2 8903.4 9128.0 13303.0 13576.0 14236.8 True False 11195.584138379707 9752.417451488078 9619.44914126449 11126.689901201667 11119.103989744528 10428.097504739853 10521.032532523694 10421.921953327595 10289.891740525743 10509.172171058508 10701.40964430898 1.0461784484937953 0.9113208236705921 0.8988955157305021 1.0397405828790838 1.0390317125798167 0.9744601740655284 0.9831445465802525 0.97388309575365 0.961545448921107 0.9820362475935398 1.0 13.38551322784917 -5.714293473328117 0.0019291429217208904 1.9490499635413236 6.604177999284874e-09 0.0 0.04632725601709633 642641.9732064265 209.8795396214565 104670.07489766361 107387.90594327798 1.930663235624986e-06 5.714293473328117 -1.9490499569371456 SKS(ph)PSPPR ddPTM_A549_PD325901_60min_R1 3 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.005)KS(0.498)PS(0.498)PPR;S(0.01)KS(0.495)PS(0.495)PPR;S(0.014)KS(0.62)PS(0.366)PPR 79.97399999999999 0.0011139000000000001 142904000.0 19861.6 20232.0 19453.2 19249.4 22600.3 19494.7 18999.4 21922.0 20321.0 21680.5 23986.1 True False 21877.935010662863 21937.02164421018 20773.41113359456 20438.3917194407 21012.932894802358 19335.941626647193 19722.432563870607 21484.74851252368 19466.97903818106 20311.589529982717 21035.961760415594 1.0400254221716476 1.0428342613500161 0.9875189625360944 0.9715929298702487 0.9989052620519319 0.919185053047234 0.9375579205027498 1.0213342635444695 0.9254142624851617 0.9655650528992706 1.0 14.3605701589237 -5.877184129632385 1.844684547533012 0.965297205412678 1.0473554530036764 0.4597329816552653 0.030347013873823495 0.28625780821672425 1.8012022497576643 0.0049733798576790025 0.026713734542576542 1.326831796082604e-06 5.877184129632385 0.08205824759099833 SKS(ph)PTISDK ddPTM_A549_MK2206_60min_R1 3 SKSPTISDK 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 S(0.005)KS(0.604)PT(0.387)IS(0.004)DK;S(0.086)KS(0.899)PT(0.012)IS(0.003)DK;S(0.023)KS(0.815)PT(0.156)IS(0.007)DK 102.87 0.00018803 148305500.0 12262.9 11394.7 11410.3 10546.0 14739.0 11902.4 11554.099999999999 11049.1 15254.3 15845.300000000001 15690.1 True False 14332.577720879899 11974.641559301215 13028.45211539523 13129.77047342793 12570.912624635244 13161.90406782631 13653.330411307139 12615.343761449603 11799.225406111547 12265.835724961216 11793.815145269462 1.2152621983929215 1.015332308655379 1.104685121389323 1.113275925703679 1.0658902543234687 1.1160005397494799 1.1576686799931348 1.0696575795076506 1.0004587371241151 1.040022721560214 1.0 13.525742866383977 -8.640346131793866 3.706494357690851 1.0000765183658418 1.1073207948161226 0.4314880487744247 0.048824207709316926 0.125377627844569 3.3001886337028754 0.007463758006904265 0.008446958310985088 2.2890425634320576e-09 8.640346131793866 0.10724427645028078 SKS(ph)PTISDK ddPTM_A549_PD325901_60min_R1 5 SKSPTISDK 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 S(0.055)KS(0.924)PT(0.02)IS(0.001)DK;S(0.016)KS(0.972)PT(0.009)IS(0.002)DK;S(0.015)KS(0.975)PT(0.011)ISDK;S(0.001)KS(0.997)PT(0.002)ISDK;S(0.013)KS(0.904)PT(0.083)ISDK 117.2 5.0702e-05 375945400.0 29252.6 28412.1 28152.0 28209.500000000004 32931.100000000006 30235.2 28873.399999999998 30185.0 28894.5 28790.300000000003 31453.2 True False 32222.30241737405 30806.487379273603 30062.564011728373 29951.936746577154 30618.133142127554 29988.974555648627 29972.193037130713 29582.936495325608 27680.164648330414 26972.47554461667 27584.65579826248 1.1681241431116094 1.1167979620472213 1.0898292235940088 1.0858187597346705 1.1099697370179311 1.0871614558097038 1.0865530915567423 1.072441748473403 1.0034623904958766 0.9778072179648379 1.0 14.751578358163 -8.528028467528134 1.349527866218464 0.9996461756269355 1.1082826577783174 0.8190227559437301 0.023084375354057152 0.1149650476066214 0.40625939199818084 0.0042897813998950905 0.005024725411817708 2.9646370544398275e-09 8.528028467528134 0.10863648215138189 SKS(ph)PVGNPQLIQFSR ddPTM_A549_MK2206_60min_R1 2 SKSPVGNPQLIQFSR 15 1 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 S(0.052)KS(0.948)PVGNPQLIQFSR;S(0.005)KS(0.995)PVGNPQLIQFSR 141.05 5.475599999999999e-14 71365000.0 13960.8 14205.7 15073.099999999999 12518.6 18765.1 14208.0 15020.1 13647.8 20094.9 20390.0 20199.9 True False 16317.041731210411 14928.709452549443 17210.692232506044 15585.657561981308 16004.778647977653 15711.481129492891 17749.057746676444 15582.417444634582 15543.437234961357 15783.884838529992 15183.707341121379 1.0746414801489008 0.983205821684844 1.133497363051451 1.026472468931968 1.0540758122117253 1.0347592176610363 1.1689541524952498 1.0262590745827531 1.0236918353178304 1.0395277308713122 1.0 13.890236470014928 -8.504761634344906 24.55408261219847 1.0119134680883883 1.0662158142005826 0.16325690681748506 0.048432955017087505 650.5071837533586 881631.9257984137 0.007410148963114535 0.008864491168765636 3.127795609248038e-09 8.504761634344906 0.05430234611219431 SKS(ph)PVGNPQLIQFSR ddPTM_A549_PD325901_60min_R1 1 SKSPVGNPQLIQFSR 15 1 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;G8JLP4 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 S(0.421)KS(0.579)PVGNPQLIQFSR 158.91 3.9851e-20 45357000.0 10141.0 10269.0 10902.0 11712.0 12836.0 12099.0 12563.0 11318.0 12555.0 12883.0 13581.0 True False 11170.50685459038 11134.40466905864 11641.875279051672 12435.423640118104 11934.44364179603 12000.469755410664 13041.091839737379 11092.253611200762 12027.357011188584 12069.565181373466 11910.623097052223 0.9378608292420053 0.9348297379852705 0.9774362923072376 1.0440615523461376 1.0019999411071703 1.0075434053807544 1.0949126450794113 0.9312907914906652 1.009800823448544 1.01334456501781 1.0 13.539961268445271 -5.930840528876748 3.878960831983023 1.0081818735821995 0.9369295817239313 0.388612538300635 0.03684373679239128 0.16363270629015264 4.892525336274954 0.0047168556431906854 0.016019159776122803 1.172625869834522e-06 5.930840528876748 -0.0712522918582682 SKS(ph)QDQAR ddPTM_A549_PD325901_60min_R1 1 SKSQDQAR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.013)KS(0.987)QDQAR 50.284 0.008816500000000001 11423000.0 2975.5 2514.2 2897.7 2539.6 2609.4 1964.7 1779.9 1769.2 1738.2 2612.9 3097.8 True False 3277.570569552672 2726.0804575856664 3094.355347285638 2696.4653241499263 2426.124745941303 1948.7001345942078 1847.6350684986533 1733.911918089449 1665.1494987533251 2447.9210480796974 2716.7902385721477 1.2064128187074359 1.0034195569763242 1.1389747001269872 0.9925187767043423 0.8930114336749058 0.7172803063435542 0.680080133632145 0.6382207553133488 0.6129105865856139 0.9010342474457068 1.0 11.407687465071428 -6.74416561157322 2.0265772549514276 0.7809186997095068 1.1041282732799533 0.6331875862519853 0.11718083179420652 0.2330287753444508 1.9472342178068731 0.024050956972539873 0.056072274935950114 1.8023303186359575e-07 6.74416561157322 0.32320957357044655 SKS(ph)QSSSNCSNPISVPLRR ddPTM_A549_MK2206_60min_R1 1 SKSQSSSNCSNPISVPLRR 19 2 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.176)KS(0.822)QS(0.001)S(0.001)SNCSNPISVPLRR 118.37 9.9805e-15 21774000.0 1371.9 1677.9 1448.1 1325.4 2734.6 2475.6 2273.9 2052.8 3441.7 2829.3 3696.0 True False 1603.4431802652819 1763.2979431096473 1653.462354916508 1650.123059499466 2332.3439625027136 2737.5663488297173 2687.0381961616467 2343.7906864363385 2662.160445265538 2190.1591649658108 2778.181195589317 0.5771557243317796 0.6346950824910507 0.5951600124360391 0.5939580406487621 0.8395219023890804 0.9853807783221337 0.9671932847388174 0.8436421246236121 0.9582385949095129 0.7883428080367619 1.0 11.439924980976803 -6.908026784844788 2.916141704249001 0.9671813544176647 0.5997718898377601 0.8230373528370178 0.06857791368456567 0.046810940352673976 0.8046098305779723 0.006946635728601517 0.013962887648725816 1.2358712094980493e-07 6.908026784844788 -0.36740946457990464 SKS(ph)QSSSNCSNPISVPLRR ddPTM_A549_PD325901_60min_R1 3 SKSQSSSNCSNPISVPLRR 19 2 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.2)KS(0.742)QS(0.054)S(0.004)SNCSNPISVPLRR;S(0.039)KS(0.912)QS(0.039)S(0.008)S(0.002)NCSNPISVPLRR;S(0.009)KS(0.771)QS(0.205)S(0.015)S(0.001)NCSNPISVPLRR 162.82 1.6059999999999998e-27 71383000.0 9540.2 9030.7 11282.4 10185.2 9730.900000000001 10742.7 10287.400000000001 9988.5 9110.099999999999 9824.099999999999 12179.1 True False 10508.714080875958 9791.74878224441 12048.091510582697 10814.316671732484 9047.435153782573 10655.215012930836 10678.892636481287 9789.271531673341 8727.234178226125 9203.804649408605 10681.147909675921 0.9838562455778973 0.9167318779823455 1.127977218597308 1.0124676451616148 0.8470470805470836 0.9975720871048332 0.9997888547922278 0.916499950609743 0.8170689379107118 0.8616868455749958 1.0 13.3827790822494 -7.114264517198073 0.9557857861105333 0.9174031443890972 1.0040175305191972 0.17216785523279243 0.078642083579975 0.896652813311587 1.5996742004996516 0.015699476128312552 0.04058399579909513 7.686621260606145e-08 7.114264517198073 0.08661438613009997 SKS(ph)SDPDLRR ddPTM_A549_PD325901_60min_R1 1 SKSSDPDLRR 10 2 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(0.409)KS(0.507)S(0.084)DPDLRR 66.498 0.001036 26634000.0 2690.8 3014.9 3270.4 2815.3 3702.6 2888.1 3409.5 3294.4 3348.5 3098.2 3674.6 True False 2963.9680351377347 3268.97620379247 3492.3490105128044 2989.194686989798 3442.5421492765668 2864.580271146502 3539.25038824999 3228.6906075931975 3207.7741897224173 2902.579123257879 3222.6474952086064 0.9197307616003695 1.0143759777179306 1.0836894248301085 0.9275586893801127 1.068234162872265 0.8888903534766137 1.0982431040044265 1.0018752011796437 0.9953847556990634 0.9006815444672117 1.0 11.65403067450934 SKS(ph)VIEQVSWDT ddPTM_A549_MK2206_60min_R1 2 SKSVIEQVSWDT 12 1 Q6WCQ1;H0Y7E2 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.074)KS(0.517)VIEQVS(0.408)WDT;S(0.017)KS(0.981)VIEQVS(0.002)WDT 207.97 1.8978999999999998e-31 147903000.0 9967.3 8746.099999999999 7970.7 7084.6 14409.1 9989.9 9166.8 10536.5 15332.2 13298.8 13629.099999999999 True False 11649.536562911402 9191.239132386487 9101.065114517649 8820.32731803978 12289.540477619354 11047.024587241063 10832.28890301886 12030.08114167794 11859.48118049229 10294.591843582268 10244.61832597574 1.1371371965486916 0.8971773120216341 0.8883752254040977 0.8609717841488931 1.1996094033545994 1.0783246613717938 1.0573638332189548 1.174282999999626 1.1576303580214389 1.0048780262979458 1.0 13.322578615779602 -6.753913751770965 24.99933325003639 1.089924244126584 0.9383240839110103 0.3873085333913999 0.09042493185747585 146.1957991999449 485642.83220084856 0.013514262397868949 0.027702061280603856 1.7623259988306127e-07 6.753913751770965 -0.15160016021557365 SKS(ph)VIEQVSWDT ddPTM_A549_PD325901_60min_R1 1 SKSVIEQVSWDT 12 1 Q6WCQ1;H0Y7E2 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.223)KS(0.754)VIEQVS(0.023)WDT 113.53 2.711e-05 102250000.0 3959.5 2953.6 4126.5 3520.8 3439.0 4241.5 3241.2 3892.6 3737.4 4290.6 4880.8 True False 4361.46552517016 3202.510237660102 4406.549104660309 3738.2718196830438 3197.456503905934 4206.958630264841 3364.5456396526956 3814.959039314373 3580.330075158598 4019.6907837616222 4280.492541940392 1.0189167443784546 0.7481639569002428 1.0294490789283737 0.8733274928189564 0.7469833138539925 0.9828211564545288 0.7860183394052854 0.8912430057838654 0.8364294622823002 0.9390720213565551 1.0 12.063561096926543 -10.865671762576905 1.07372129044541 1.0011304785168351 0.8736805595808312 0.10388608717033787 0.09610152829563831 0.6389257890737136 1.2885960040286948 0.061968438724851825 0.014484980765439507 1.3624740439455124e-11 10.865671762576905 -0.12744991893600388 SKS(ph)VKEDSNLTLQEK ddPTM_A549_MK2206_60min_R1 1 SKSVKEDSNLTLQEK 15 2 P46940;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(0.153)KS(0.847)VKEDSNLTLQEK 204.31 1.2798000000000001e-39 36759000.0 5698.0 6522.9 5528.2 4372.0 7030.9 5598.9 5152.8 4357.1 7089.0 7264.9 6636.7 True False 6659.683097275005 6854.887748441458 6312.181886920402 5443.140196266541 5996.663923776909 6191.371881750973 6088.997061076452 4974.732268059128 5483.352818806814 5623.754044307822 4988.624226398163 1.3349738916060556 1.374103848545585 1.2653151651548349 1.0911104844223842 1.2020676746996757 1.2410980664745732 1.2205764124015348 0.9972152726466099 1.0991713486437222 1.1273156263301534 1.0 12.284426285511833 -2.000000000001709 0.14206445242537097 0.9575973169916756 2.412687785729927 0.5973659675028841 0.07599793105441613 25.536872590160275 0.23017838718944247 0.14575690752987214 7.629932067303247 0.009999999999960651 2.000000000001709 1.4550904687382513 SKS(ph)VKEDSNLTLQEK ddPTM_A549_PD325901_60min_R1 3 SKSVKEDSNLTLQEK 15 2 P46940;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 S(0.154)KS(0.846)VKEDSNLTLQEK;S(0.261)KS(0.739)VKEDSNLTLQEK;S(0.019)KS(0.981)VKEDSNLTLQEK 213.45 5.294199999999999e-46 121721000.0 23036.0 24710.899999999998 25306.9 23670.5 30358.1 25926.5 27303.8 28857.5 24402.4 28938.9 30962.5 True False 25374.597761793102 26793.37426591108 27024.378416752206 25132.573025394086 28225.85178575944 25715.363179903678 28342.86105021266 28281.91452422919 23376.851989631865 27111.692915256426 27154.30878745888 0.9344593508309912 0.9867080202861029 0.9952151103633807 0.9255464104098822 1.039461251129156 0.9470085716849559 1.0437703007672474 1.0415258493816308 0.8608892302362114 0.998430603682973 1.0 14.728893519497362 -8.747322403011314 24.997494220558554 0.9343087938742044 0.9892931307222701 0.05453402419742759 0.05302690137138577 337.804929354036 598164.3960592877 0.010296998490342107 0.011649001062085367 1.7892770724933319e-09 8.747322403011314 0.054984336848065696 SKS(ph)VPGLNVDMEEEEEEEDIDHLVK ddPTM_A549_MK2206_60min_R1 1 SKSVPGLNVDMEEEEEEEDIDHLVK 25 1 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 S(0.178)KS(0.822)VPGLNVDMEEEEEEEDIDHLVK 179.66 4.6647999999999996e-49 5126700.0 1301.0 1353.0 1733.1 1238.4 1922.4 1638.3 1607.6 1367.3 2492.0 2094.6 2057.0 True False 1520.5769936038585 1421.8619208697487 1978.879640429391 1541.8080555938889 1639.6175065878804 1811.6638185844747 1899.6801108885475 1561.1189621806332 1927.5659789062743 1621.4284052371213 1546.1901296881013 0.9834346788325382 0.9195906076289387 1.2798423702449662 0.9971658892331072 1.0604242486780233 1.1716953716099099 1.2286199959585518 1.0096552372220506 1.2466552087582556 1.0486604293381416 1.0 10.594502018085679 -5.726157433238634 24.999664508603118 1.1191594586824705 0.9515123691548736 0.2892762550734982 0.09924553797504147 184.7839440287356 130929.54496143646 0.01489117686804994 0.05766883839859581 1.8786356814784932e-06 5.726157433238634 -0.16764708952759688 SKS(ph)VPGLNVDMEEEEEEEDIDHLVK ddPTM_A549_PD325901_60min_R1 1 SKSVPGLNVDMEEEEEEEDIDHLVK 25 1 Q96C24-2;Q96C24 Q96C24-2 SYTL4 Synaptotagmin-like protein 4 1 S(0.172)KS(0.828)VPGLNVDMEEEEEEEDIDHLVK 222.98 3.147199999999999e-95 9803400.0 1504.5 1301.4 1679.4 1605.2 2116.2 1944.0 1492.3 1875.2 2159.4 1524.1 1876.4 True False 1657.235732445639 1411.073545263697 1793.3741830525923 1704.3495583262957 1967.5654124936707 1928.168708531145 1549.0902931178932 1837.7976649340576 2068.6479275157803 1427.868065895467 1645.614695479625 1.007061821335174 0.857475051201114 1.0897898444750471 1.0356917466816569 1.195641615196084 1.1717011970224098 0.9413444698647401 1.116784913249951 1.2570669994611707 0.8676806726493809 1.0 10.684410867084894 -5.861434120806794 6.317923116338819 1.1131094114887419 0.9335274343597825 0.12060072082287343 0.11712478502459894 0.18838628921994718 10.051107947862164 0.015285578804172553 0.0487644443488564 1.3758334979983786e-06 5.861434120806794 -0.1795819771289594 SKS(ph)YDEGLDDYREDAK ddPTM_A549_MK2206_60min_R1 1 SKSYDEGLDDYREDAK 16 2 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 S(0.053)KS(0.946)YDEGLDDY(0.001)REDAK 130.83 9.083799999999999e-11 22348000.0 5540.1 5813.8 5058.0 4636.6 6600.8 5790.1 4966.4 4939.3 7449.0 6875.7 6972.3 True False 6475.133437559362 6109.697587252443 5775.300456575996 5772.5672081448865 5629.831064026886 6402.804538842685 5868.7305938771315 5639.460900971851 5761.813393608679 5322.474594618958 5240.88548430936 1.2355037058041443 1.165775822720075 1.1019703586095546 1.1014488344435922 1.0742137146255126 1.221702813009745 1.1197975249502152 1.0760511592660784 1.0993969265039123 1.015567810163734 1.0 12.355594870450748 -14.999999999843181 0.08934746302954162 0.5521662812549324 1.2461042950464525 0.5821069611498795 0.04576718575775146 69.13356385126681 0.4511466857824964 5.897526612464744 0.4737167628647737 1.0000000003610881e-15 14.999999999843181 0.6939380137915201 SKS(ph)YNTPLLNPVQEHEAEGAAAGGTSIR ddPTM_A549_PD325901_60min_R1 2 SKSYNTPLLNPVQEHEAEGAAAGGTSIR 28 1 P85299-2;P85299-4;P85299-3;P85299;P85299-5 P85299-2 PRR5 Proline-rich protein 5 1 S(0.147)KS(0.852)YNT(0.001)PLLNPVQEHEAEGAAAGGTSIR;S(0.179)KS(0.808)YNT(0.013)PLLNPVQEHEAEGAAAGGTSIR 248.5 5.598499999999998e-138 68586000.0 3937.0 4607.7 4022.6 4295.0 5414.6 4575.6 5037.9 4774.5 5106.4 5224.9 5417.1 True False 4336.681341733782 4996.007049724558 4295.597825858856 4560.292395347273 5034.297175355941 4538.337830635345 5229.62004134466 4679.26885197721 4891.795765984339 4894.998922312985 4750.831041826195 0.9128258411115339 1.0516069727043205 0.9041781928341636 0.9598936176004945 1.0596666416957616 0.9552724124852967 1.1007800520168407 0.9849369112016501 1.0296715928049416 1.0303458235448786 1.0 12.213964184432553 -6.72660283404869 24.28017986069936 1.0168662686963472 0.9600926972580002 0.27677395225629076 0.0504996118882948 142.85923155305537 99568.21356339376 0.00638043704358633 0.013281411863547764 1.8767099905850217e-07 6.72660283404869 -0.05677357143834705 SKSAT(ph)TT(ph)PSGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SKSATTTPSGSPR 13 1 A0A096LNZ0;A0A096LP25;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LNZ0;Q2M2I8 AAK1 AP2-associated protein kinase 1 3 S(0.031)KS(0.232)AT(0.485)T(0.456)T(0.795)PS(0.001)GS(0.999)PR 105.14 4.9652e-05 28213000.0 1327.7 1285.9 1494.9 1145.0 1192.6 1040.1 1331.0 1144.3 1447.1 1224.2 1674.9 True False 1462.4871265989195 1394.2673058664434 1596.3529035639656 1215.724049516328 1108.8358902466457 1031.6297704440562 1381.651933351146 1121.4760388140157 1386.283419425805 1146.9038030767206 1468.8979180658828 0.9956356453446374 0.9491927850931218 1.0867691239333395 0.8276436603008382 0.75487607178766 0.7023154963705148 0.9406044602271513 0.7634812637563528 0.9437574949055294 0.7807920407340926 1.0 10.520518423090376 -6.260390065885769 24.991343547221888 0.9127799127854829 1.0043985375966529 0.13210231568023179 0.11096211702300121 177.17152885454038 4219588.345720011 0.017295620900066516 0.043135255884887855 5.490475198732369e-07 6.260390065885769 0.09161862481117 SKSDGEAKPEPS(ph)PSPR ddPTM_A549_MK2206_60min_R1 1 SKSDGEAKPEPSPSPR 16 2 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 S(0.001)KS(0.001)DGEAKPEPS(0.963)PS(0.035)PR 43.534 0.013259 66844000.0 1230.2 1352.2 1416.8 1245.8 1185.8 1039.5 849.87 1035.8 1277.9 2131.3 2245.7 True False 1437.8276844976683 1421.0212042868252 1617.7235442619358 1551.0210559260875 1011.3703908197615 1149.4992000357454 1004.2803781045338 1182.6278220044614 988.4576903869687 1649.8378497478636 1688.0307118330422 0.8517781545196669 0.8418218900435349 0.958349592173735 0.918834618975519 0.5991421742093238 0.6809705486859878 0.5949420061285378 0.7005961524954952 0.5855685465068327 0.9773743085256401 1.0 10.72112543717055 SKSDGEAKPEPSPS(ph)PR ddPTM_A549_MK2206_60min_R1 4 SKSDGEAKPEPSPSPR 16 2 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SKSDGEAKPEPS(0.129)PS(0.871)PR;SKSDGEAKPEPS(0.029)PS(0.971)PR;SKSDGEAKPEPS(0.289)PS(0.711)PR;SKSDGEAKPEPS(0.162)PS(0.838)PR 103.95 2.0756999999999997e-07 125065900.0 8932.7 8420.8 7677.9 7602.299999999999 10199.099999999999 8033.400000000001 7293.849999999999 7764.56 13040.9 12960.7 12881.2 True False 10440.321376452865 8849.382751855122 8766.741671717044 9464.86384128021 8698.825900666068 8883.48905586066 8619.048131876347 8865.21015796772 10087.156972038054 10032.868868402915 9682.442536965667 1.0782735179262635 0.9139618147042871 0.9054266666956547 0.9775285322009623 0.8984123445562063 0.9174843043937767 0.8901729185554689 0.9155964648508974 1.0417987954513819 1.0361919350514488 1.0 13.241155318883107 -8.759617203146988 24.99807342620486 1.01973832226125 0.9331185383588455 0.3701087307215428 0.051277612135560015 36.27241666513794 497613.8957844372 0.008484023324955129 0.009385169051020482 1.7393332404521274e-09 8.759617203146988 -0.08661978390240443 SKSDGEAKPEPSPS(ph)PR ddPTM_A549_PD325901_60min_R1 4 SKSDGEAKPEPSPSPR 16 2 P26358;K7EJL0;K7ENQ6;K7ERQ1 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SKSDGEAKPEPS(0.073)PS(0.927)PR;SKSDGEAKPEPS(0.251)PS(0.749)PR;SKSDGEAKPEPS(0.012)PS(0.988)PR;SKSDGEAKPEPS(0.027)PS(0.973)PR 127.5 1.2195e-10 279025000.0 22179.399999999998 21407.3 21195.7 22695.8 26046.3 24394.600000000002 24761.600000000002 26389.199999999997 24384.4 23637.9 25686.4 True False 24431.0363603887 23211.368299925885 22634.167662098287 24097.668020098394 24216.897742856978 24195.938465603846 25703.916238067442 25862.846704073076 23359.60846703518 22145.398959930757 22527.135639505348 1.0845158812620865 1.0303737089068978 1.004751248641005 1.069717358022155 1.0750100736459514 1.0740796723029427 1.141020174486411 1.1480752421412141 1.0369542244895948 0.9830543622729759 1.0 14.459376263855578 -8.976462917773102 11.432577574670265 1.0162676525480154 1.0769587765104696 0.38672903755095933 0.04049159278013381 0.44747907410105964 213.45975383801363 0.007783905287880754 0.008060156795182702 1.0556916395802914e-09 8.976462917773102 0.06069112396245413 SKSDS(ph)YTLDPDTLR ddPTM_A549_MK2206_60min_R1 1 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.002)KS(0.18)DS(0.581)YT(0.237)LDPDTLR 149.36 6.5898e-14 53723000.0 7050.6 7273.4 6294.7 6602.2 9646.6 7793.3 7363.8 7920.1 11771.0 11018.0 11481.0 True False 8240.56890937999 7643.584992796777 7187.383112694527 8219.739296384021 8227.597918773747 8617.981833226135 8701.707141428882 9042.798429288996 9104.887294424456 8529.02614766667 8629.950840519738 0.9548801681104018 0.8857043491960892 0.832841721293243 0.9524665259725846 0.9533771478909422 0.9986130851131382 1.0083147983383904 1.0478389270574795 1.0550335062947027 0.988305299216862 1.0 13.075136625950398 -7.023482293246755 1.2922277790049945 1.0274490280005761 0.8932983817132124 0.6970831182157955 0.034625375077750466 0.16829005613804235 0.5549291158153857 0.005603906941593553 0.013107808749722063 9.473658090582156e-08 7.023482293246755 -0.13415064628736373 SKSDS(ph)YTLDPDTLR ddPTM_A549_PD325901_60min_R1 2 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.016)KS(0.056)DS(0.905)YT(0.02)LDPDT(0.002)LR;S(0.001)KS(0.109)DS(0.724)YT(0.165)LDPDTLR 140.35 5.633699999999999e-11 159000000.0 8949.4 9229.0 10083.9 9604.2 11391.099999999999 10204.7 10629.9 9969.2 11671.5 10814.8 12689.099999999999 True False 9857.936499799933 10006.760219178315 10768.254093416717 10197.42962127922 10591.028433161635 10121.596306557498 11034.42666140447 9770.356485313898 11180.987443734564 10131.951682334688 11128.421142832283 0.8858342412885175 0.8992075417296352 0.9676353864764053 0.9163410955063731 0.9517098874338721 0.9095267133268701 0.9915536552560869 0.8779643005878599 1.0047236081585695 0.9104572474650268 1.0 13.441961302779019 -8.787639518593345 24.967812391413084 1.0022306119389575 0.9278430918479236 0.08653191578387487 0.042838013072927554 113.82831605824808 108473.86235028262 0.005216734078751095 0.0055544656888598404 1.6306489734931383e-09 8.787639518593345 -0.07438752009103389 SKSERPPTILMTEEPS(ph)SPK ddPTM_A549_MK2206_60min_R1 2 SKSERPPTILMTEEPSSPK 19 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMTEEPS(0.5)S(0.5)PK;SKSERPPTILMTEEPS(0.569)S(0.431)PK 92.336 1.6049e-06 33231000.0 3913.5 4043.0 3392.3 3647.0 4890.9 3983.1000000000004 3697.6 3889.8 5693.7 5581.0 5747.6 True False 4574.003124111218 4248.771430950773 3873.3791496328085 4540.515163720053 4171.4550889360535 4404.588998232206 4369.406057490351 4441.191062012893 4404.086040970566 4320.24822382716 4320.312294309837 1.0587204841963649 0.9834408120326652 0.8965507319307283 1.0509692018561343 0.9655448043490191 1.019507086104254 1.0113634755629064 1.0279791736033208 1.0193906692280243 0.9999851699418207 1.0 12.076919886210053 -7.289865417097965 24.686088014353807 1.0117692482265153 0.9887021508847462 0.0648258086207254 0.041003157276588466 1340.2105422820496 1163880.3086980165 0.005800113258181774 0.009272891419945813 5.1302033850726e-08 7.289865417097965 -0.02306709734176904 SKSERPPTILMTEEPS(ph)SPK ddPTM_A549_PD325901_60min_R1 3 SKSERPPTILMTEEPSSPK 19 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMTEEPS(0.568)S(0.432)PK;SKSERPPTILMTEEPS(0.5)S(0.5)PK;SKSERPPTILMTEEPS(0.571)S(0.429)PK 100.64 5.1642e-10 68493000.0 4850.200000000001 4749.799999999999 5645.4 5648.1 6059.3 5470.5 5166.0 6330.6 6268.799999999999 7242.4 8163.8 True False 5342.588733471474 5150.082315424546 6028.530792548003 5996.970309234211 5633.715671450196 5425.9500617384965 5362.594956943667 6204.331216740373 6005.344136339223 6785.113628004284 7159.704354592066 0.7462024224568524 0.7193149410033117 0.8420083419619757 0.8376002712162123 0.7868642883049861 0.7578455468288184 0.748996703125629 0.8665624877039875 0.8387698484348082 0.947680699085357 1.0 12.80568430022843 -10.426600905939342 0.3437954372826735 1.063461996618013 0.7680571048555516 0.7374384869380768 0.04290832427951502 0.8459222555912501 0.14777915705428848 0.09450023330141606 0.017978883361174362 3.7445453447207213e-11 10.426600905939342 -0.29540489176246143 SKSERPPTILMTEEPS(ph)SPKGAVR ddPTM_A549_MK2206_60min_R1 1 SKSERPPTILMTEEPSSPKGAVR 23 3 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMT(0.001)EEPS(0.5)S(0.5)PKGAVR 59.661 0.00021344 5703200.0 1662.7 1870.8 1742.4 1534.9 1763.0 1184.3 1553.5 961.04 2206.2 1706.8 2142.3 True False 1943.3231108878813 1966.0157291671294 1989.4985202724429 1910.9505689042785 1503.6650354319781 1309.6218399252841 1835.7508411702888 1097.2703630615642 1706.499222577456 1321.2326945759187 1610.307785527865 1.2068022823666922 1.2208943823262097 1.235477179053865 1.1866989566083863 0.9337749273435146 0.8132742396795809 1.1399999786801769 0.6814041221951087 1.0597348146199637 0.8204845722352473 1.0 10.653120748291569 -6.6901190785086975 5.966544525706857 0.9888697305775355 1.218157072302161 0.4981122676138412 0.1299144956120454 0.14652488552872878 9.162334152461083 0.016886542493954205 0.03531938638647566 2.0411782005524347e-07 6.6901190785086975 0.22928734172462562 SKSERPPTILMTEEPS(ph)SPKGAVR ddPTM_A549_PD325901_60min_R1 1 SKSERPPTILMTEEPSSPKGAVR 23 3 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMT(0.005)EEPS(0.498)S(0.498)PKGAVR 42.738 0.012639 7456700.0 1293.8 1062.7 1264.2 1590.6 1154.0 1740.6 1457.3 1190.9 1817.5 1454.5 2050.4 True False 1425.1456235547803 1152.2574585459743 1349.9962142521663 1688.8477494853005 1072.9470210838751 1726.4251306940914 1512.7583489651588 1167.1465652570232 1741.1167955265018 1362.6626217734777 1798.2137985565018 0.7925340272101136 0.6407788993004822 0.7507428845979618 0.9391807308124351 0.5966737781376011 0.9600777905719342 0.8412561121372277 0.6490588417205665 0.9682479341022552 0.757786767550856 1.0 10.81234884488049 -8.859361753637762 8.00281712059492 0.98588188849682 0.7748540265936094 0.11253379881852055 0.1295116666897211 0.15711167162500958 11.435159679900217 0.018062839120414644 0.01919519873375608 1.382414391565124e-09 8.859361753637762 -0.21102786190321066 SKSERPPTILMTEEPSS(ph)PK ddPTM_A549_MK2206_60min_R1 3 SKSERPPTILMTEEPSSPK 19 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMT(0.001)EEPS(0.163)S(0.836)PK;SKSERPPTILMTEEPS(0.152)S(0.848)PK;SKSERPPTILMTEEPS(0.091)S(0.909)PK 119.06 9.19e-15 44011600.0 5037.0 5182.9 5100.9 4508.2 6423.6 4823.8 4924.0 4858.8 6745.4 6755.599999999999 6746.5 True False 5887.122457173427 5446.687472044216 5824.284321658458 5612.709202380786 5478.696949291469 5334.251314220712 5818.627062711622 5547.5497794509365 5217.577670190358 5229.505268032034 5071.157856072327 1.1609030174684947 1.0740520462249503 1.1485117377453196 1.1067904730396023 1.0803641110739914 1.051880352695657 1.147396162346683 1.0939414502366882 1.0288730539008373 1.031225100155401 1.0 12.308099468281414 -8.797561476965559 2.8560944312334806 1.011896119788912 1.1076386469803001 0.5952257417787448 0.03251862099265192 0.11475608638341286 1.837013472510072 0.00566781246686657 0.0060849839613062095 1.5938172504367625e-09 8.797561476965559 0.0957425271913881 SKSERPPTILMTEEPSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SKSERPPTILMTEEPSSPK 19 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMTEEPS(0.146)S(0.854)PK 74.062 0.00019572 31101000.0 1380.0 1665.2 1358.8 1606.6 1792.1 1791.5 1473.7 2083.1 1931.9 2078.7 2205.2 True False 1520.0965840976944 1805.5322480199086 1451.016339128179 1705.8360331466652 1666.2290784093705 1776.9106179699315 1529.7824599395822 2041.5509363396636 1850.7089613632186 1947.4505272468384 1933.9743799145538 0.7859962364986732 0.9335864356691633 0.7502769189694681 0.8820365206813298 0.8615569553113662 0.9187870513819518 0.7910045116560285 1.0556246026536622 0.9569459557395926 1.0069681105769768 1.0 10.917352967680024 -8.258528185898395 24.99997131128396 0.9847975253524592 0.850614529544014 0.6279415309761711 0.057957874476282985 134.39029173315137 1154081.1666225386 0.008557330257301892 0.010803708898320424 5.5140641470730706e-09 8.258528185898395 -0.13418299580844528 SKSERPPTILMTEEPSS(ph)PKGAVR ddPTM_A549_MK2206_60min_R1 1 SKSERPPTILMTEEPSSPKGAVR 23 3 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMTEEPS(0.149)S(0.851)PKGAVR 81.839 8.3492e-06 5989400.0 1308.3 1581.3 1428.7 1430.0 2157.0 1163.0 1167.0 1098.5 2335.6 1996.4 1505.8 True False 1529.1090551359937 1661.7814157216076 1631.311143200894 1780.3500641951405 1839.708157360621 1286.0678880630796 1379.0287941073243 1254.2157390151585 1806.5903291867953 1545.4118534399825 1131.8683020341973 1.3509602242485932 1.4681755931631346 1.4412552593522554 1.5729304027646058 1.6253729820459604 1.1362345652332115 1.2183650621091953 1.1080933504022314 1.5961135460194313 1.3653636652449435 1.0 10.144490388542653 -7.262963618338966 24.999180495319624 1.2592621081472606 1.4921358127183992 0.3835771804936958 0.15925309296230103 177.04818704953107 2903787.594221108 0.033569571521394156 0.055437883510079736 5.458035821630989e-08 7.262963618338966 0.23287370457113865 SKSESLMGT(ph)LKR ddPTM_A549_PD325901_60min_R1 1 SKSESLMGTLKR 12 2 O14544;J3KTM7 O14544 SOCS6 Suppressor of cytokine signaling 6 1 SKSES(0.003)LMGT(0.997)LKR 46.156000000000006 0.014144 7041800.0 3210.1 3488.6 3905.9 3865.6 4581.4 3966.9 3674.2 4029.4 4273.7 4287.9 4104.1 True False 3535.9869888492817 3782.596565242765 4170.977862084748 4104.369332585428 4259.61826897198 3934.594881621502 3814.0236915993873 3949.0304559968527 4094.091251192084 4017.1612622224056 3599.3217180334286 0.9824037043238382 1.0509192735650963 1.158823297508303 1.1403174414839317 1.1834502727639804 1.093148984684608 1.0596506759843813 1.0971596221063826 1.1374618808537582 1.1160884124626884 1.0 11.81350934504299 -10.885156889523026 1.0573398781020995 0.9981209061776892 1.1053117851331966 0.0 0.06328980063747414 0.5228680607290835 1.0076118035476305 0.04278001372925706 0.009565134667596701 1.3026960925519563e-11 10.885156889523026 0.10719087895550738 SKSEVIEDS(ph)DVETVSEK ddPTM_A549_MK2206_60min_R1 2 SKSEVIEDSDVETVSEK 17 1 Q56NI9;E5RFE4 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 SKSEVIEDS(1)DVETVSEK;SKSEVIEDS(1)DVETVSEK 201.15 7.660899999999999e-49 38419000.0 8996.0 10193.900000000001 9008.8 8482.7 11837.2 10156.7 9451.599999999999 9823.900000000001 14201.0 14105.5 13855.3 True False 10514.30486891645 10712.7259683327 10286.383304310368 10560.961880802877 10095.963560644022 11231.47525252819 11168.833376507957 11216.467909431967 10984.496174337071 10919.057753304785 10414.646623173343 1.0095690472609373 1.028621167471598 0.9876843330836036 1.0140489891710749 0.9694004920128324 1.0784307580381405 1.0724159715276842 1.0769897736591958 1.054716167699418 1.0484328607952085 1.0 13.346326268025994 -7.254605837141663 24.980378254275113 1.0378709640370272 1.0032403678485802 0.4147774321192973 0.027611678405063702 714.6898351832338 2612586.1856578467 0.005102573055500341 0.008718822840755503 5.5640902139873075e-08 7.254605837141663 -0.034630596188446994 SKSEVIEDS(ph)DVETVSEK ddPTM_A549_PD325901_60min_R1 2 SKSEVIEDSDVETVSEK 17 1 Q56NI9;E5RFE4 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 SKSEVIEDS(0.995)DVET(0.003)VS(0.001)EK;SKSEVIEDS(0.999)DVET(0.001)VSEK 156.92 1.0784999999999998e-22 55592000.0 10283.3 10138.8 11284.3 10089.7 11745.0 11321.7 10559.2 10624.0 11812.6 12707.1 13186.3 True False 11327.253045834645 10993.232258121687 12050.12045600832 10712.917853628718 10920.07171805036 11229.499828897673 10961.036134215945 10412.095985633236 11316.15750142303 11904.771537392755 11564.46869484277 0.9794875445411588 0.9506041780392532 1.0419951641515646 0.9263648971963749 0.9442778571332221 0.971034651501588 0.9478201224327817 0.9003522998230399 0.978528093250797 1.0294265868609895 1.0 13.497411365461025 -8.985167289773383 15.932582735633588 0.990530167514936 0.9577125916765721 0.22718408141261803 0.03562373218341357 2.356355484818609 2531.171847811833 0.005955729808489798 0.006049805148229259 1.0347435078020618e-09 8.985167289773383 -0.03281757583836398 SKSEVIEDS(ph)DVETVSEKK ddPTM_A549_MK2206_60min_R1 2 SKSEVIEDSDVETVSEKK 18 2 Q56NI9;E5RFE4 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 SKSEVIEDS(1)DVETVSEKK;SKSEVIEDS(1)DVETVSEKK 136.57 1.3294e-13 55989000.0 7862.1 8749.8 8016.7 7205.5 11646.8 7703.4 7607.6 7012.7 13110.900000000001 12660.1 12011.6 True False 9189.030270109837 9195.12744658251 9153.588606214467 8970.847823467182 9933.57114842267 8518.568674896927 8989.802445630568 8006.771700493037 10141.302083805089 9800.174617178689 9028.78821670471 1.0177479025489438 1.0184232065129233 1.0138224960553242 0.9935827054697851 1.1002108932009245 0.9434896987766537 0.9956820594150152 0.8868046861127191 1.1232185139797664 1.0854363157003495 1.0 13.140316656525076 -8.799723048859462 24.999996945371816 1.0581864777958934 0.9991496896019298 0.24228292769615445 0.05662149689433537 225.3435367361705 147152.96685184867 0.011059569250126813 0.011773914310428303 1.5859042068338268e-09 8.799723048859462 -0.05903678819396352 SKSEVIEDS(ph)DVETVSEKK ddPTM_A549_PD325901_60min_R1 2 SKSEVIEDSDVETVSEKK 18 2 Q56NI9;E5RFE4 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 SKSEVIEDS(1)DVETVSEKK;SKSEVIEDS(0.999)DVETVSEKK 153.24 1.5756e-18 125380000.0 12237.5 12134.5 12371.7 13248.7 14595.7 14832.7 15488.300000000001 15115.7 14060.7 14789.6 14883.1 True False 13479.84199122865 13157.11690103145 13211.317959075726 14067.04210901919 13570.548384431477 14711.90740896601 16077.715732022965 14814.205505462745 13469.777676401382 13855.782131991067 13052.573051744192 1.0327344606914393 1.0080094437221547 1.012161962756479 1.0777217682102485 1.039683771976137 1.1271269925587648 1.2317660026330617 1.1349643818682287 1.0319634008561585 1.0615364554607525 1.0 13.672046612634382 -4.370475507322 16.325348632890663 1.047048263122411 1.0525118777375122 0.0 0.07061712253136013 0.0 0.0 0.010545431831734906 0.0 4.261127141602997e-05 4.370475507322 0.005463614615101253 SKSNPDFLKK ddPTM_A549_MK2206_60min_R1 1 SKSNPDFLKK 10 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 0 38.634 0.039525 7180300.0 4542.8 5813.2 6169.1 6256.9 6328.1 5026.2 4786.4 4729.9 7964.1 7681.9 7573.6 False True 5309.513579203384 6109.06704981525 7043.971144061479 7789.840780882914 5397.244872783379 5558.069147878461 5656.026923834869 5400.3778097112445 6160.244066054354 5946.553454688743 5692.866099273609 0.9326608928815068 1.0731092112977587 1.2373330096346842 1.3683513093478297 0.9480716353880254 0.9763217772832656 0.9935288877700039 0.9486219622134298 1.082098886330803 1.044562326074647 1.0 12.474939451458463 SKSPAS(ph)VDR ddPTM_A549_MK2206_60min_R1 1 SKSPASVDR 9 1 Q13243-3;Q13243 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 1 S(0.002)KS(0.051)PAS(0.947)VDR 71.548 0.00085142 156090000.0 3947.8 4447.1 4249.0 4342.0 5384.3 4502.5 4498.3 4400.9 5768.3 5409.7 5379.9 True False 4614.092125556731 4673.438394900124 4851.572091734167 5405.790194919788 4592.276602539079 4978.951561482389 5315.5828830616765 5024.741052190997 4461.789260082289 4187.645012800181 4043.922352313574 1.1409942436003888 1.1556696661661658 1.1997193984099441 1.3367690385615525 1.1355995992138141 1.2312183884128918 1.3144621533152265 1.2425414274624451 1.1033320799371058 1.035540410513664 1.0 11.981539580862558 -9.120068090066182 1.5914932184455755 1.033041314476798 1.2209026165452739 0.5907012674120217 0.06460377286177009 0.16966312075111994 0.8829866182048605 0.014366560161260334 0.01347618481236093 7.584586521540358e-10 9.120068090066182 0.18786130206847584 SKSPPKSPEEEGAVS(ph)S ddPTM_A549_PD325901_60min_R1 1 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.034)KS(0.093)PPKS(0.039)PEEEGAVS(0.453)S(0.38) 56.513999999999996 0.0033869 23694000.0 5937.1 5879.4 6342.2 6344.6 8123.6 6340.7 7200.0 7566.2 6902.9 7296.7 6971.6 True False 6539.83002133799 6374.877671756094 6772.61983074679 6736.491532367942 7553.026360898585 6289.063441452381 7473.9999399911785 7415.286205430928 6612.7951184813755 6835.985116737389 6114.137396613595 1.0696243144552444 1.0426454719985379 1.1076983377079332 1.101789360523538 1.2353380159696672 1.0286100938679708 1.222412820511813 1.2128098739714277 1.0815581478662828 1.118062070460438 1.0 12.57793325742767 -9.651734664709807 1.2145182779244512 1.016989142111943 1.1249487952718646 0.04858864182897271 0.07483192974493669 0.36148175686764983 1.0910785603324482 0.018795764539671238 0.013327353522889053 2.229797043497739e-10 9.651734664709807 0.10795965315992162 SKSPS(ph)GQKR ddPTM_A549_PD325901_60min_R1 1 SKSPSGQKR 9 2 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 1 S(0.032)KS(0.385)PS(0.584)GQKR 43.897 0.012934999999999999 22381000.0 3458.9 3235.9 2901.8 2935.4 2831.2 2618.7 1723.5 2584.7 2710.9 3774.5 5310.6 True False 3810.044981692401 3508.600649392036 3098.733597940942 3116.712991222905 2632.346279109764 2597.374175427219 1789.0887356353876 2533.1461308420758 2596.97030040869 3536.1774258397995 4657.42986666707 0.8180574030670115 0.7533340812070769 0.6653312420479762 0.6691916100613822 0.5651928970416279 0.5576840123812623 0.3841364844674918 0.5438935643393455 0.5575972960956517 0.759255110022804 1.0 12.18531832934732 -10.685840329909896 0.9462413859884887 1.0001322411019111 0.6079097098437436 0.3392242532920434 0.1294047556876983 0.31759826909951394 0.5055340102589533 0.08384643390067366 0.02205475545111414 2.061387651320979e-11 10.685840329909896 -0.39222253125816753 SKSPS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.012)KS(0.189)PS(0.799)PPR;S(0.018)KS(0.066)PS(0.916)PPR 70.977 0.0017687000000000002 53929000.0 8878.099999999999 9640.5 7896.7 7297.5 10461.599999999999 8946.2 7713.9 8274.1 11332.7 13135.6 12702.3 True False 10376.506231294708 10131.16027209521 9016.57080178799 9085.387827597224 8922.712498397725 9892.880945993058 9115.41577966108 9446.97901336853 8765.86154460318 10168.2588369296 9547.968344354484 1.0867763546189513 1.061080211696089 0.944344438167236 0.9515519427721213 0.9345142523093449 1.0361241878061436 0.9546969000008088 0.9894229507950069 0.9180865738611558 1.06496570476607 1.0 13.220978067931535 -5.690151407059328 5.274752714473665 0.9637506959266093 1.0790931102228358 0.3959406244764865 0.043892767334521646 0.10276437329991392 5.1424823237138755 0.005009050440240197 0.020184464508899644 2.0410262624561618e-06 5.690151407059328 0.11534241429622649 SKSPS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.003)KS(0.302)PS(0.695)PPR 94.309 0.00070776 51063000.0 4761.2 4408.4 5139.0 4812.6 5706.4 4870.9 4114.3 4972.0 4999.6 5332.3 5361.4 True False 5244.553518989811 4779.911339281147 5487.7634433174235 5109.863371792384 5305.60215001129 4831.233005341748 4270.871937931346 4872.829559541453 4789.484198577335 4995.617667983986 4701.981788714805 1.1153921377529001 1.0165737669919055 1.1671171199532435 1.0867467381640084 1.1283757335566953 1.0274886680627215 0.9083131602469915 1.036335268510971 1.0186096871052424 1.0624493867615428 1.0 12.19905323594955 -7.393718698834076 5.366788012957497 1.003286097746122 1.1002799626980813 0.47734958003281225 0.04921845295547722 0.13807758553718774 5.50049880688753 0.006520314877878557 0.010481793233674814 4.039069268007751e-08 7.393718698834076 0.09699386495195927 SKSPS(ph)PPRLTEDR ddPTM_A549_PD325901_60min_R1 1 SKSPSPPRLTEDR 13 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.036)KS(0.036)PS(0.892)PPRLT(0.036)EDR 65.107 0.0011545 11953000.0 1619.8 1315.8 1718.7 1928.1 1642.4 2361.8 1771.2 2728.3 1942.4 1914.7 1703.4 True False 1784.240903566264 1426.6870838005016 1835.341317382692 2047.194357967189 1527.0434899724057 2342.566283852293 1838.6039852378299 2673.8819161900537 1860.7676828779527 1793.8055152352538 1493.892598742268 1.1943568801856606 0.9550131548959089 1.2285630967901542 1.3703758621541833 1.0221909468311496 1.5680955149148854 1.230747101087307 1.7898756031332088 1.2455833066209463 1.2007593562920702 1.0 10.54486071603446 -10.159103589220548 1.137302525595582 1.029660436551326 1.2861976051059556 0.07522131582709268 0.22731845167830197 0.5526903998300379 1.4276719808564624 0.07996361356838254 0.04062749477484734 6.93260427740533e-11 10.159103589220548 0.2565371685546296 SKSQDADS(ph)PGSSGAPENLTFK ddPTM_A549_MK2206_60min_R1 1 SKSQDADSPGSSGAPENLTFK 21 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y8L4;H0Y8U8;H0Y948 A8MQ02 MLLT4 Afadin 1 S(0.009)KS(0.006)QDADS(0.985)PGSSGAPENLTFK 152.99 3.827900000000001e-23 6415100.0 1762.4 2320.5 1834.6 1720.8 2814.8 1935.7 2127.8 1661.9 2804.7 2751.0 3498.0 True False 2059.85003345691 2438.603538343129 2094.7738666734513 2142.396077249647 2400.746648743012 2140.5344891863315 2514.393717310681 1897.4794143552951 2169.4399281855644 2129.5471893475215 2629.350060111318 0.783406540158332 0.9274548776665693 0.7966888465907676 0.8148006268739071 0.9130570650000756 0.8140926237473715 0.956279559521348 0.7216534014017754 0.8250860017070978 0.8099139105339833 1.0 11.360490513482398 -10.66246541500945 0.9237320896557252 1.0003810242516158 0.8414671094732187 0.0 0.0856547537188717 0.4003055200311038 0.6066230580556158 0.04206225095263119 0.011130183097682813 2.1753772630372007e-11 10.66246541500945 -0.15891391477839711 SKSQDADS(ph)PGSSGAPENLTFK ddPTM_A549_PD325901_60min_R1 2 SKSQDADSPGSSGAPENLTFK 21 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y8L4;H0Y8U8;H0Y948 A8MQ02 MLLT4 Afadin 1 S(0.002)KS(0.001)QDADS(0.917)PGS(0.069)S(0.01)GAPENLTFK;SKSQDADS(0.972)PGS(0.027)SGAPENLTFK 161.2 3.1784e-28 19732400.0 5989.4 6367.0 7027.0 6401.6 7655.299999999999 7257.9 7442.4 7615.799999999999 6131.1 7561.0 7582.0 True False 6597.439478836763 6903.569434988446 7503.894476783715 6797.012292911549 7117.618137351289 7198.794068749078 7725.624604637545 7463.89689452048 5873.431188474579 7083.597169631668 6649.462066257998 0.9921764216559383 1.038214725672305 1.128496471144853 1.0221897989917528 1.070405104417228 1.0826129989189062 1.1618420449137414 1.1224813105401783 0.8832941868002666 1.0652887555486095 1.0 12.699021917646919 -8.756801624336456 24.99939711686343 0.9448889202771467 1.07863392948434 0.25134087778113334 0.06398710698902182 70.61961987611538 380668.2433384369 0.010591686871212464 0.011817643289761325 1.7506461606517828e-09 8.756801624336456 0.13374500920719323 SKSS(ph)DPDLRR ddPTM_A549_PD325901_60min_R1 1 SKSSDPDLRR 10 2 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(0.25)KS(0.302)S(0.448)DPDLRR 72.958 0.00038652 27055000.0 5185.5 5007.6 6444.8 5599.2 6257.2 6268.9 5872.0 5632.1 6270.6 6724.3 6639.1 True False 5711.928142636664 5429.60802617373 6882.182883730709 5945.049867294165 5817.715858168133 6217.848156847167 6095.462173281695 5519.763347203024 6007.068488598894 6299.726550423781 5822.532788722435 0.9810040320768998 0.9325165221379681 1.181991262816191 1.021041887270954 0.999172708728471 1.067894056155495 1.0468746840014183 0.9480003887473438 1.0316933723814974 1.0819563889147374 1.0 12.507431143442421 -11.950273730890046 0.3259859565793895 0.9739503815357071 1.0281230486659219 0.0 0.06785102114707686 29.541270274725267 2.108986558320533 0.6410953014804208 0.02303175398751037 1.1213114816079927e-12 11.950273730890046 0.054172667130214736 SKST(ph)AALSGEAASCSPIIMPYK ddPTM_A549_MK2206_60min_R1 2 SKSTAALSGEAASCSPIIMPYK 22 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 S(0.287)KS(0.287)T(0.365)AALS(0.062)GEAASCSPIIMPYK;S(0.291)KS(0.291)T(0.337)AALS(0.078)GEAAS(0.001)CS(0.001)PIIMPYK 84.404 1.1722e-05 5121300.0 3125.3599999999997 3328.0 4058.4 3236.7 3519.6000000000004 3024.8 3469.5 3179.4 5395.6 4114.6 4852.7 True False 3652.8443602842067 3497.3809849626964 4633.9421457034405 4029.691645300986 3001.871502385928 3344.8823283002603 4099.8632400645765 3630.0896865041364 4173.505215002687 3185.1090022861927 3647.640662293364 1.0014265928233104 0.9588063377832301 1.2703943657624333 1.1047392049762426 0.8229625065366432 0.9169988598046958 1.1239767344535765 0.9951884032956818 1.1441656680016004 0.8731970325946619 1.0 11.832747897864945 -11.416368889136777 2.213827965150755 0.9993491224908527 1.0574320035639204 0.026562336573509926 0.12344153063530683 1.2308016789377119 10.920575474366222 0.09909994479412436 0.017946935227374942 3.833814634636597e-12 11.416368889136777 0.058082881073067694 SKST(ph)DNLAFLK ddPTM_A549_MK2206_60min_R1 1 SKSTDNLAFLK 11 1 A0A0A0MRY4;Q96N96-6 A0A0A0MRY4 SPATA13 Spermatogenesis-associated protein 13 1 S(0.282)KS(0.282)T(0.436)DNLAFLK 97.551 0.00011038 4311400.0 1327.9 1442.0 1755.9 1813.6 2419.4 1924.5 1574.2 1805.3 2569.5 2227.9 2803.2 True False 1552.0170559620015 1515.3916407200138 2004.913023270422 2257.9320814155967 2063.5094649598013 2128.1493126202913 1860.2117632251486 2061.2068034993777 1987.5123526483437 1724.6158426562502 2107.0880756157944 0.736569616582556 0.719187611688772 0.9515088839769966 1.071588846971059 0.9793180877627732 1.0099954231853083 0.8828353141723815 0.9782252708620127 0.9432507239012755 0.8184830347693145 1.0 11.041034904274557 -5.784774205297148 5.7804187144824715 0.975867353952258 0.7259947708259076 0.6513308628178234 0.06456222655420867 0.04370938253113635 4.4219863140814475 0.00613467601961822 0.020914817009043917 1.641442956487766e-06 5.784774205297148 -0.2498725831263504 SKSVIEQVS(ph)WDT ddPTM_A549_PD325901_60min_R1 1 SKSVIEQVSWDT 12 1 Q6WCQ1;H0Y7E2 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.066)KS(0.428)VIEQVS(0.507)WDT 175.74 4.7881e-16 112280000.0 5549.1 4616.6 4514.9 5177.7 4621.2 5188.0 4630.2 4241.8 6282.3 6195.9 7363.6 True False 6112.440546968492 5005.657083959111 4821.308264299246 5497.514769590121 4296.6228542745275 5145.7506480759175 4806.404794742657 4157.193971372274 6018.276778286739 5804.68981660109 6457.9238817063315 0.9465024145427748 0.7751186256838478 0.7465724825213248 0.8512820637547608 0.6653257196861325 0.7968119077173595 0.7442647022145907 0.6437353625595612 0.9319212936738072 0.8988476672889116 1.0 12.656854720948143 -8.915459146410527 6.881698190357777 0.97030207699714 0.7697367443041124 0.4682764053409777 0.08130743850763661 0.11064723832136618 7.4623817173422236 0.013410404651226162 0.014203846608985738 1.2149008994461466e-09 8.915459146410527 -0.20056533269302756 SKSYNT(ph)PLLNPVQEHEAEGAAAGGTSIR ddPTM_A549_MK2206_60min_R1 2 SKSYNTPLLNPVQEHEAEGAAAGGTSIR 28 1 P85299-2;P85299-4;P85299-3;P85299;P85299-5 P85299-2 PRR5 Proline-rich protein 5 1 S(0.309)KS(0.309)Y(0.009)NT(0.373)PLLNPVQEHEAEGAAAGGTSIR;S(0.32)KS(0.277)Y(0.031)NT(0.372)PLLNPVQEHEAEGAAAGGTSIR 80.23899999999999 1.7925e-06 5780600.0 1633.58 1833.01 2088.37 1763.02 2569.3999999999996 2107.64 1951.29 1970.86 3129.8999999999996 2554.1 2533.3999999999996 True False 1909.2883668035286 1926.302379581272 2384.532268584343 2194.959979144974 2191.444663663597 2330.6690658617968 2305.814135093128 2250.235440505614 2420.9826474232514 1977.1270361005113 1904.2868617169834 1.002626445199562 1.0115610301719136 1.2521917346183602 1.1526414550620319 1.1507954540460887 1.2239064989191648 1.2108544051047598 1.1816683115046591 1.271332957283754 1.0382506311669095 1.0 10.89503510721733 -5.69421458557853 11.04612889125478 1.155318052657877 1.0064329278451216 0.3652565226788014 0.07932681111989316 0.5815837517197819 92.38079469440544 0.014137588555449755 0.05480443559642603 2.0220198486633054e-06 5.69421458557853 -0.1488851248127554 SKSYNT(ph)PLLNPVQEHEAEGAAAGGTSIR ddPTM_A549_PD325901_60min_R1 1 SKSYNTPLLNPVQEHEAEGAAAGGTSIR 28 1 P85299-2;P85299-4;P85299-3;P85299;P85299-5 P85299-2 PRR5 Proline-rich protein 5 1 S(0.28)KS(0.28)Y(0.005)NT(0.435)PLLNPVQEHEAEGAAAGGTSIR 103.5 5.1959e-15 4482500.0 972.76 843.16 851.57 753.25 1286.8 826.01 957.65 995.3 787.88 730.72 1038.9 True False 1071.5138790919373 914.2160522702774 909.3626611064057 799.7765417451293 1196.4196072190039 819.2832484227431 994.0938947961877 975.4479607022542 754.7681435265043 684.5822144945444 911.1218861297068 1.1760379104090548 1.0033959958460816 0.9980691661016134 0.8777931404353002 1.313127941971841 0.899202687252878 1.091065761814736 1.0706009542211676 0.828394263178808 0.7513618374403616 1.0 9.831500254507297 -8.740875620869817 24.953001174449966 0.9189639499102558 1.0490178654829303 0.27549002116437726 0.1305310498777328 282.9020716862757 343286.1009782904 0.020377578086377406 0.02309306991367229 1.8160356891769988e-09 8.740875620869817 0.13005391557267454 SKT(ph)AVYK ddPTM_A549_PD325901_60min_R1 1 SKTAVYK 7 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.116)KT(0.884)AVYK 47.823 0.023181999999999998 11576000.0 2604.7 3109.2 3198.0 3149.7 4086.4 3241.1 2837.2 3538.4 3438.2 3470.0 3603.4 True False 2869.127226521204 3371.2231957383487 3415.0355111362364 3344.249815512295 3799.3853613146875 3214.705556183281 2945.1711985754114 3467.823836178898 3293.704410662572 3250.903607806097 3160.20464383462 0.9078928581788868 1.0667736984424139 1.080637457387064 1.058238371377859 1.2022592804953542 1.0172460072973404 0.9319558479610721 1.097341541771488 1.0422440259014245 1.0287003451337955 1.0 11.625802269990363 SKT(ph)EEDILR ddPTM_A549_MK2206_60min_R1 2 SKTEEDILR 9 1 Q63HQ0-2;Q63HQ0 Q63HQ0-2 AP1AR AP-1 complex-associated regulatory protein 1 S(0.096)KT(0.904)EEDILR;S(0.042)KT(0.958)EEDILR 113.99 8.862799999999999e-05 36254000.0 1800.56 2178.59 2650.57 2479.49 4329.5 3523.2999999999997 3393.5 3712.6 5391.8 5057.3 5364.9 True False 2104.450508534484 2289.470925489747 3026.4606823223858 3086.9651613085357 3692.6362852539705 3896.1332674227415 4010.055023824512 4238.872419360653 4170.565908935332 3914.8524175526086 4032.6472662925116 0.5218533557657894 0.5677339906781914 0.7504898104080444 0.7654934730124794 0.9156854149182414 0.9661477957641267 0.994397664616779 1.0511389019297337 1.0342005222712223 0.9707896969505593 1.0 11.977511504086522 -6.1724612807282595 0.7176725853412089 1.0211429700031243 0.4484795963606139 0.9671968304584752 0.03236776971779155 0.12166482641527769 0.08357700163855283 0.004987400509870552 0.04389813434020123 6.722622415887438e-07 6.1724612807282595 -0.5726633736425104 down SKT(ph)EEDILR ddPTM_A549_PD325901_60min_R1 2 SKTEEDILR 9 1 Q63HQ0-2;Q63HQ0 Q63HQ0-2 AP1AR AP-1 complex-associated regulatory protein 1 S(0.003)KT(0.997)EEDILR;S(0.009)KT(0.991)EEDILR 131.13 1.938e-05 45659000.0 7365.6 7761.2 8477.3 7452.7 8560.4 8090.200000000001 7715.9 8155.799999999999 9173.0 8734.3 9380.099999999999 True False 8113.350289731861 8415.26356193377 9052.620556146094 7913.036352690248 7959.147035776781 8024.3160934972575 8009.5327968024885 7993.126170898678 8787.490709966778 8182.814807395041 8226.407165353032 0.9862568344419749 1.022957336390562 1.1004342933902915 0.9619067222951716 0.9675119254123642 0.9754338597891292 0.9736368059358953 0.9716424205895304 1.0682051755202258 0.9947009238563357 1.0 13.006046764341175 -8.749887750469822 24.995121472038797 1.0322080018624331 0.996040721035517 0.05419566765181738 0.04151567263419013 360.01349697168064 778988.8105051295 0.007705537047541457 0.008702975964261705 1.7787390908200159e-09 8.749887750469822 -0.036167280826916115 SKT(ph)FDWAEFRPIQQALAQER ddPTM_A549_MK2206_60min_R1 3 SKTFDWAEFRPIQQALAQER 20 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.001)KT(0.999)FDWAEFRPIQQALAQER;S(0.005)KT(0.995)FDWAEFRPIQQALAQER;S(0.068)KT(0.932)FDWAEFRPIQQALAQER 332.14 2.1565999999999993e-206 655393000.0 83440.0 81129.0 64698.0 59544.0 150682.0 107060.0 95355.0 104287.0 147552.0 106946.0 112720.0 True False 97522.63208786023 85258.11957002341 73873.14925653492 74132.28267303167 128516.87740723867 118389.01813932357 112679.76920488756 119070.0016155429 114131.70759212621 82786.82432277703 84728.51308626283 1.1510013398744716 1.0062506287962516 0.8718806286771966 0.874939025515023 1.5168078929509188 1.3972748231612502 1.3298919702528866 1.405312064125529 1.3470283312528775 0.9770834080198132 1.0 16.370559930757743 -6.731931465403902 24.99978100087397 1.237054896137547 0.9707389602665475 0.4047248004592249 0.17305864744175883 213.10647155191222 180547.67834285245 0.028493799966213675 0.05930772320375218 1.8538241462769774e-07 6.731931465403902 -0.26631593587099944 SKT(ph)FDWAEFRPIQQALAQER ddPTM_A549_PD325901_60min_R1 3 SKTFDWAEFRPIQQALAQER 20 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.005)KT(0.995)FDWAEFRPIQQALAQER;S(0.003)KT(0.997)FDWAEFRPIQQALAQER;S(0.003)KT(0.997)FDWAEFRPIQQALAQER 298.18 1.2199999999999996e-144 887170000.0 62236.0 71907.0 74687.0 77911.0 71378.0 82126.0 76267.0 76581.0 87143.0 85953.0 90999.0 True False 68554.1529042784 77966.85524763852 79755.70894941578 82723.38552128091 66364.65552073212 81457.19308478852 79169.38241990385 75053.53187836775 83480.68275794551 80525.91291116917 79806.6998901889 0.8590024772181584 0.9769462382847313 0.9993610694234535 1.0365468768299562 0.8315674700501018 1.0206811357551513 0.9920142360082301 0.9404414915243791 1.0460360204445476 1.0090119378695006 1.0 16.284222247458292 -8.759240589975267 24.99568752859471 1.0217392325535506 0.9608933323443306 0.164801570622233 0.060868064731711795 73.4583801001965 835067.4067306848 0.010041988483335136 0.011119683447505684 1.7408422163767811e-09 8.759240589975267 -0.06084590020921998 SKT(ph)FNPGAGLPTDK ddPTM_A549_MK2206_60min_R1 1 SKTFNPGAGLPTDK 14 1 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 S(0.351)KT(0.626)FNPGAGLPT(0.023)DK 85.93700000000001 5.5663999999999994e-05 10398000.0 2555.2 3171.2 3040.6 3221.9 3347.2 2683.7 2412.9 2339.0 4374.9 4662.1 4653.0 True False 2986.4552913578627 3332.6005347096457 3471.8028011595447 4011.2656446365854 2854.831314009027 2967.6873527041166 2851.292696916505 2670.5604128870805 3383.9921352797182 3608.928372030931 3497.5316837329765 0.85387512148864 0.9528435582755617 0.9926437027881415 1.1468847196704426 0.8162417305000697 0.848509068983373 0.815229983527489 0.7635557457014213 0.9675372351932277 1.031850086967349 1.0 11.772121411317992 -8.977653120133128 24.876122854690106 0.9856782934081191 0.9022748999184774 0.16324814617551753 0.10106228954731572 244.52118543768268 272199.6604060458 0.018840452961600394 0.0193626637458305 1.0528024328840851e-09 8.977653120133128 -0.08340339348964165 SKT(ph)FSPGPQSQYVCR ddPTM_A549_MK2206_60min_R1 2 SKTFSPGPQSQYVCR 15 1 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.029)KT(0.971)FSPGPQSQYVCR;S(0.117)KT(0.882)FSPGPQSQYVCR 118.46 3.0053e-07 47908000.0 4709.0 5064.799999999999 5088.6 4226.799999999999 6344.3 4923.5 4273.799999999999 4531.2 6901.1 6038.2 7308.0 True False 5503.764076003511 5322.576686490104 5810.239996704748 5262.36618974826 5411.061874243391 5444.501502045205 5050.294139036745 5173.511476218014 5338.011868792169 4674.166426287975 5493.2219094606935 1.001919122641789 0.968935312320681 1.0577107738353098 0.9579744413174275 0.9850433795372798 0.9911308138978365 0.919368309213739 0.9417991046944492 0.9717451719179204 0.8508970697575313 1.0 12.423436858188234 SKT(ph)FSPGPQSQYVCR ddPTM_A549_PD325901_60min_R1 2 SKTFSPGPQSQYVCR 15 1 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.037)KT(0.962)FS(0.001)PGPQSQYVCR;S(0.004)KT(0.994)FS(0.002)PGPQSQYVCR 168.79 1.544e-27 64030000.0 7039.4 8349.1 9958.4 7888.1 7952.7 8293.4 8731.7 9851.3 7424.3 8129.0 8597.4 True False 7754.034705867617 9052.707958169 10634.236908723915 8375.3300218251 7394.129787325596 8225.861300068003 9063.989621669583 9654.808093304659 7112.2824896987195 7615.733552696185 7539.974303408933 1.0283900705552675 1.2006284894202008 1.4103810544707056 1.1107902606562585 0.9806571600625484 1.09096675519822 1.2021247363630432 1.2804828908952086 0.9432767544689312 1.01004768003692 1.0 12.880343891391083 -8.778564230892414 24.997363784443888 0.9732140030200813 1.1636270962605075 0.3305384977922171 0.11289688400911226 192.22839642049126 280597.17099274806 0.02035957469514982 0.021700760078197236 1.6650825487009678e-09 8.778564230892414 0.1904130932404262 SKT(ph)FTGR ddPTM_A549_MK2206_60min_R1 2 SKTFTGR 7 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.02)KT(0.96)FT(0.02)GR;S(0.053)KT(0.647)FT(0.3)GR 77.37899999999999 0.0068322 81695000.0 12199.599999999999 11510.9 12188.7 10014.3 13025.0 8482.3 7602.5 8694.5 12538.900000000001 11712.599999999999 11540.8 True False 14258.594228416314 12096.755642970884 13917.240940108311 12467.803949559004 11109.039754113166 9379.891355904952 8983.775841646038 9926.972000789525 9698.85917050878 9066.715525246014 8674.900850123699 1.6436607720090537 1.3944546285849932 1.6043112400425719 1.437227256537603 1.280595587897095 1.0812678459340779 1.0356055932925083 1.1443326180088815 1.1180368903433036 1.0451664730112424 1.0 13.08263155314811 -6.93029684904561 1.7299413162663937 1.0623302878257723 1.5348055451699574 0.9014321817318603 0.0698650649864586 0.07856444124264894 0.47203392807934275 0.011037256808977592 0.024397125385131644 1.1740947631361866e-07 6.93029684904561 0.47247525734418505 SKT(ph)FTGR ddPTM_A549_PD325901_60min_R1 4 SKTFTGR 7 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.01)KT(0.989)FT(0.001)GR;S(0.065)KT(0.895)FT(0.039)GR;S(0.019)KT(0.97)FT(0.011)GR;S(0.011)KT(0.952)FT(0.037)GR 79.97399999999999 0.0063669 118552000.0 19629.7 19404.300000000003 21319.800000000003 20361.8 23589.800000000003 22236.199999999997 23824.8 21768.9 23816.9 26297.0 24241.0 True False 21622.492693378637 21039.56846039678 22766.68983437221 21619.502140996978 21932.93382839203 22055.1157595886 24731.465801430804 21334.702212128326 22815.958518500767 24636.6029321259 21259.510676359812 1.017073865083003 0.9896544083581563 1.0708943484615736 1.0169331961641745 1.0316763241771623 1.0374234899072012 1.163313030950037 1.003536842259127 1.0732118375552122 1.158850893003918 1.0 14.375820770731107 -7.198102772174824 4.134378921486145 1.0436877603828023 1.024883556298939 0.030662174580696644 0.056807778734270654 0.8035603456621568 27.68322963003597 0.007218313615666673 0.012662569285801253 6.337197290117213e-08 7.198102772174824 -0.018804204083863407 SKT(ph)PLVAR ddPTM_A549_MK2206_60min_R1 1 SKTPLVAR 8 1 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.184)KT(0.816)PLVAR 61.815 0.0042195 31106000.0 1682.7 1622.2 1741.6 1411.8 2241.8 1589.2 1627.8 1663.7 2600.7 2483.4 2416.1 True False 1966.6986219348294 1704.7630510235829 1988.5850682429311 1757.6910633781097 1912.0341896945026 1757.3680891744168 1923.550189415512 1899.5345698675649 2011.6456024645047 1922.3982152037952 1816.1156890322918 1.0829148351131612 0.9386863740668181 1.0949660752628259 0.9678298987189999 1.0528151930196257 0.9676520608171287 1.059156198601239 1.0459325809137867 1.1076637984094504 1.0585218919771215 1.0 10.826640391848764 SKT(ph)PLVAR ddPTM_A549_PD325901_60min_R1 2 SKTPLVAR 8 1 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.023)KT(0.977)PLVAR;S(0.04)KT(0.96)PLVAR 101.39 0.00091044 94424000.0 8313.4 7859.9 9031.3 8722.900000000001 9695.3 8310.6 8644.6 9453.0 9782.0 9344.3 10884.2 True False 9157.370247998386 8522.28135732145 9644.218327618728 9261.69372185675 9014.335574969231 8242.921228970647 8973.574983506625 9264.452499264959 9370.896557821321 8754.29930329179 9545.512400628499 0.9593377352268112 0.8928050166023903 1.010340558248474 0.9702667948183628 0.9443532412545718 0.8635388948243274 0.940083109935071 0.9705558078427478 0.9817070225799842 0.9171115112390809 1.0 13.220606927865347 -8.539610934403457 2.3404464314203572 0.9917782314660679 0.9396587489529762 0.0 0.04273065697270326 0.2871464242581685 3.1327196127004338 0.006561992105176221 0.007659292152982048 2.8866163395552832e-09 8.539610934403457 -0.05211948251309173 SKT(ph)PPK ddPTM_A549_PD325901_60min_R1 1 SKTPPK 6 1 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 S(0.12)KT(0.88)PPK 42.464 0.056517 22951000.0 5242.2 4208.9 4314.6 3831.2 4556.8 3408.7 2675.3 3442.9 3610.9 4693.3 5504.3 True False 5774.384284896328 4563.598774135836 4607.414701797499 4067.8445227134957 4236.746088106588 3380.940677350882 2777.110005480334 3374.2286585971997 3459.1464302429977 4396.964237036411 4827.30599463254 1.1961918907392322 0.945371762057363 0.954448445348288 0.8426738489825409 0.8776626327018439 0.7003783644770261 0.5752918933600212 0.6989879370292642 0.7165790679292356 0.9108526043149897 1.0 12.237002564302902 -4.898133875011312 0.8947707100043242 0.8180964243011281 1.6356946361994895 0.5104419086592671 0.11649025463859981 3.2049688804108443 1.2308040911998217 0.022923641114660442 2.9811608246838914 1.2643465416920971e-05 4.898133875011312 0.8175982118983615 SKT(ph)PPKSYSTAR ddPTM_A549_PD325901_60min_R1 1 SKTPPKSYSTAR 12 2 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 S(0.015)KT(0.836)PPKS(0.006)Y(0.001)S(0.034)T(0.109)AR 47.223 0.012397 12782000.0 3836.0 4058.1 4429.3 4224.0 4912.2 4564.7 3649.5 4144.6 4763.5 4552.1 5081.2 True False 4225.427896086054 4400.090328903188 4729.898933544633 4484.906886599973 4567.184018170026 4527.526596621459 3788.3837195830274 4061.9327016242014 4563.306660517469 4264.679629133754 4456.244612380656 0.9482037598085773 0.9873987430309691 1.0614091785723996 1.0064319346697634 1.024895268424258 1.0159959765320699 0.8501292117263649 0.9115147517573544 1.0240251730884264 0.957012013497939 1.0 12.121612711995015 SKT(ph)PPPPPQTAQTK ddPTM_A549_MK2206_60min_R1 1 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.189)KT(0.811)PPPPPQTAQTK 100.07 1.2892000000000001e-05 51033000.0 2563.5 2726.0 2846.0 2385.5 3650.9 2425.2 2509.8 2918.4 4587.7 4075.8 4279.5 True False 2996.1561284423456 2864.741756312594 3249.6055949812735 2969.947607089163 3113.8574463179866 2681.8330542825306 2965.7981726225885 3332.092137225162 3548.5932750514903 3155.0739492339635 3216.782041808571 0.9314140931841988 0.8905613495348758 1.0102038474307846 0.9232666585701806 0.9680038640626341 0.8337005800911285 0.9219767252104927 1.0358464123207303 1.1031500514894583 0.9808168250840167 1.0 11.651402471863621 -8.287669768147595 5.66188640089466 1.04944330465845 0.9253567513161207 0.47713091992306744 0.0511818329373836 0.10651381778486257 11.075457408734234 0.008837675160114787 0.010873066922818262 5.156205667018566e-09 8.287669768147595 -0.12408655334232921 SKT(ph)PPPPPQTAQTK ddPTM_A549_PD325901_60min_R1 2 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.051)KT(0.949)PPPPPQTAQTK;S(0.039)KT(0.961)PPPPPQTAQTK 126.4 1.0103e-07 167019000.0 8630.8 8358.3 8424.900000000001 8733.1 9262.3 10033.2 9286.0 10102.0 10160.900000000001 9787.5 10824.5 True False 9506.992462340848 9062.6832744564 8996.664377039297 9272.523752690862 8611.748001200325 9951.492945696862 9639.383811494172 9900.507685134306 9733.87270848156 9169.515579654806 9493.155122159018 1.001457612353719 0.954654501884436 0.9477001335456103 0.9767588997936887 0.9071534058364533 1.0482808737074134 1.015403592109627 1.042910134484629 1.0253569633304165 0.9659081160752584 1.0 13.212671942254374 -7.273499877749354 24.99995944612962 1.01738589278826 0.9579048425209206 0.4958416651776011 0.029493321872368677 414.3934454414233 858986.5447109804 0.0037270438010524043 0.005987984668296331 5.327213742800201e-08 7.273499877749354 -0.05948105026733941 SKT(ph)PSR ddPTM_A549_PD325901_60min_R1 1 SKTPSR 6 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.006)KT(0.987)PS(0.007)R 58.815 0.027014 47660000.0 4628.0 5108.1 4686.7 4587.1 5377.5 4022.5 2638.6 3397.7 3414.1 5266.3 6729.6 True False 5097.831153046468 5538.577513878509 5004.767645416569 4870.4347489400425 4999.802951367887 3989.742093655622 2739.0133668973212 3329.930208055912 3270.617249852563 4933.784919247621 5901.901862449203 0.8637607455795516 0.9384394459551519 0.8479923526447226 0.8252314020888994 0.8471511502383813 0.6760095621108714 0.46408995451521634 0.5642130766766155 0.5541632724633793 0.8359652590360376 1.0 12.526964216320692 -7.137547955306423 5.4208742735823545 0.7317498905390065 0.8680640667315256 0.25313691605193145 0.14286112302043205 0.4644072537533474 18.792232840651007 0.029957939284516965 0.052481786949119986 7.285377240810166e-08 7.137547955306423 0.13631417619251907 SKT(ph)PSS(ph)PCPASK ddPTM_A549_PD325901_60min_R1 1 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 2 S(0.39)KT(0.544)PS(0.472)S(0.594)PCPAS(0.001)K 45.14 0.027957999999999997 3889200.0 2161.0 2028.9 2759.3 1853.6 2818.1 2607.4 3079.3 2726.8 2919.3 2802.7 2855.7 True False 2380.383129155883 2199.882523425168 2946.5626910188294 1968.0926621689646 2620.1663779172177 2586.1661988807136 3196.4844465576166 2672.4118348667816 2796.6119731392123 2625.7370436882247 2504.467003773802 0.9504549772742281 0.878383512384201 1.1765228635789033 0.7858329373888283 1.046197204422768 1.0326213900937027 1.2763132601631657 1.0670581128998369 1.1166495581395954 1.0484214963629745 1.0 11.290287888948862 -6.97849613849897 24.999642612898626 1.0729972266263121 0.9537824466610125 0.2587108293960658 0.11051835747856135 293.2663143984713 340939.52255801327 0.015672159865408614 0.029616259667244252 1.0507607975950414e-07 6.97849613849897 -0.11921477996529961 SKT(ph)PSSPCPASK ddPTM_A549_PD325901_60min_R1 1 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 S(0.143)KT(0.71)PS(0.143)S(0.004)PCPASK 94.48700000000001 0.00010361 6984800.0 1533.1 1707.2 1705.2 1968.1 1870.5 1840.0 1900.9 1632.7 1384.8 1796.2 2148.0 True False 1688.739183391431 1851.0717354189221 1820.9251262005973 2089.6650671205985 1739.122532874688 1825.0156500500564 1973.2397897123935 1600.1345176716275 1326.60167177172 1682.7876254585897 1883.8096172938779 0.8964489659084188 0.9826214488054349 0.9666184467283827 1.1092761433729355 0.9231944231036281 0.9687898571574977 1.0474730416479048 0.8494141355803491 0.7042121770656443 0.8932896456256235 1.0 10.879437454461687 -8.278256102561322 23.430633271400627 0.855601528992596 0.9859141250931918 0.3335995451076186 0.08358458376697234 413.72642444661506 576440.9850793863 0.019015293870073575 0.023027052784577364 5.269190467120514e-09 8.278256102561322 0.13031259610059576 SKT(ph)PTGPELDTSYK ddPTM_A549_MK2206_60min_R1 2 SKTPTGPELDTSYK 14 1 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20;A0A5F9ZH87;A0A5F9ZHE1;H0Y326;H0Y325;A0A5F9ZH86 Q8NF91 SYNE1 Nesprin-1 1 S(0.002)KT(0.878)PT(0.121)GPELDTSYK;S(0.002)KT(0.981)PT(0.017)GPELDTSYK 148.72 1.0333e-12 19163600.0 3788.3 3637.5 4323.700000000001 3591.6 5478.3 4003.9 2941.9 4450.0 5231.9 5789.6 5964.700000000001 True False 4427.672424957334 3822.6332129813104 4936.865674989648 4471.542161233048 4672.44932706013 4427.590040426285 3476.4051494295923 5080.801127553441 4046.8830036275017 4481.725338948168 4483.500372654652 0.9875481335882521 0.8526001773739016 1.10111860480711 0.997332840319466 1.0421431780306962 0.9875297585410341 0.7753774641422043 1.1332219706151447 0.9026168545250657 0.9996040964516676 1.0 12.130409802311595 -7.546650056736954 24.991740475874582 0.9536746079930943 0.9961477940344495 0.024145827357910488 0.09756364085453759 650.9244467133524 684340.9421847775 0.014271305597867608 0.021168331920478945 2.8402066717467273e-08 7.546650056736954 0.04247318604135519 SKT(ph)PTGPELDTSYK ddPTM_A549_PD325901_60min_R1 3 SKTPTGPELDTSYK 14 1 Q8NF91;Q8NF91-8;Q8NF91-4;Q8NF91-2;E7ENN3;A0A0C4DG40;F8WAI0;Q8NF91-9;Q8NF91-11;Q8NF91-3;Q5JV20;A0A5F9ZH87;A0A5F9ZHE1;H0Y326;H0Y325;A0A5F9ZH86 Q8NF91 SYNE1 Nesprin-1 1 S(0.002)KT(0.996)PT(0.001)GPELDTSYK;SKT(0.5)PT(0.5)GPELDTSYK;S(0.001)KT(0.992)PT(0.007)GPELDTSYK 163.53 8.0949e-20 140681000.0 19614.5 17850.1 18775.6 17669.8 22929.800000000003 19342.9 20034.3 20585.1 19422.9 21091.7 22950.300000000003 True False 21605.74960056828 19354.390571931395 20049.82512285474 18761.22341497259 21319.28995151564 19185.377835518066 20796.71624968961 20174.514031801446 18606.623057954166 19759.96646246797 20127.558593938407 1.073441147853622 0.9615865968841418 0.9961379582764163 0.9321161991610198 1.0592089374384497 0.9531895160546651 1.0332458431373155 1.0023328928664592 0.9244351703717169 0.9817368743578697 1.0 14.296884568300253 -8.654250478416262 21.90727184177801 0.9642598457734168 0.9989778649394507 0.09371643498888838 0.044210715071097105 6.893987727998799 1381.2161156395505 0.007600485635143416 0.008618135763108107 2.2169174486030274e-09 8.654250478416262 0.0347180191660339 SKT(ph)PVQAAAVSIVEKPVTR ddPTM_A549_MK2206_60min_R1 1 SKTPVQAAAVSIVEKPVTR 19 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.111)KT(0.889)PVQAAAVSIVEKPVTR 146.34 3.3098e-21 7933800.0 2252.9 1863.8 2011.0 2249.1 3241.3 2254.5 2525.9 2268.6 3276.6 2899.8 2387.1 True False 2633.1344418832673 1958.659459066547 2296.1900391803724 2800.129600965934 2764.509063724146 2493.0696935840174 2984.8233342208123 2590.18099729612 2534.455331655015 2244.7331660014347 1794.3171893915733 1.4674854911110364 1.091590422611233 1.2797012996119024 1.5605544089534231 1.5407025469457551 1.3894252968893315 1.6634870088007807 1.443546889373786 1.412490136437032 1.251023609021207 1.0 10.809219229051482 -10.46733994814972 0.7959549101325039 0.9991738743452656 1.4266078774839943 0.31038466453006974 0.15940645125167882 0.41074946310571064 0.4685361219605775 0.10268693565930734 0.02967141158415224 3.409259441140291e-11 10.46733994814972 0.4274340031387287 SKT(ph)PVQAAAVSIVEKPVTR ddPTM_A549_PD325901_60min_R1 1 SKTPVQAAAVSIVEKPVTR 19 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.24)KT(0.76)PVQAAAVSIVEKPVTR 146.72 3.1471e-21 13019000.0 2442.1 2189.2 2271.9 2792.7 2942.3 2953.9 2257.4 2530.5 3334.4 3301.2 3267.3 True False 2690.020194220999 2373.6915669980685 2426.084796044532 2965.198736318121 2735.642998383957 2929.844417762424 2343.306592296678 2480.0271923611544 3194.266763688347 3092.761668613683 2865.442813121178 0.9387799267544621 0.8283856010417215 0.846670114976723 1.0348134406103482 0.9547016558338371 1.0224752713075773 0.8177816641694677 0.8654952669112211 1.114755021130224 1.0793311436723103 1.0 11.484542388715578 -8.758535463479085 24.998839966248596 1.0541898723420942 0.9144045494757223 0.45451180762705246 0.07345233887641257 57.55179138365382 495443.4625654574 0.013814772706726758 0.01533533168840348 1.7436709675293985e-09 8.758535463479085 -0.1397853228663719 SKT(ph)SPVVSGSSSK ddPTM_A549_PD325901_60min_R1 1 SKTSPVVSGSSSK 13 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.065)KT(0.565)S(0.37)PVVSGSSSK 89.01299999999999 0.00072712 6125800.0 953.54 824.19 982.74 1320.7 1332.3 1574.1 1342.0 1775.3 1414.8 1154.7 1219.1 True False 1050.3426788409527 893.6473837950564 1049.4346460956929 1402.2766394726752 1238.7238441854836 1561.2810514911907 1393.0705443705772 1739.8902488040926 1355.3408760995303 1081.792044937665 1069.1584285116237 0.9824013456108048 0.8358418733499614 0.9815520488919605 1.3115704857930042 1.1585970901524034 1.4602897099774552 1.3029598862255352 1.6273455854678107 1.2676707585669051 1.011816411945261 1.0 10.062259932942982 -6.117126228473766 4.916362003595429 1.2130222192257243 0.9089441135012352 0.38630907366791867 0.17936635414827215 0.2216304382852786 7.996908802211132 0.02876243059100342 0.07941102780393688 7.636138055914715e-07 6.117126228473766 -0.3040781057244891 SKTDGS(ph)QKTESSTEGKEQEEK ddPTM_A549_PD325901_60min_R1 2 SKTDGSQKTESSTEGKEQEEK 21 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.106)KT(0.106)DGS(0.788)QKTESSTEGKEQEEK;S(0.015)KT(0.015)DGS(0.967)QKT(0.002)ESSTEGKEQEEK 75.623 7.8719e-05 27454000.0 2654.6 2658.3 2483.3 2906.3 3125.2 2969.2 2880.0 3014.1000000000004 3240.1 3115.6 3160.9 True False 2924.093037786766 2882.3242703046612 2651.8316712960013 3085.8155503138023 2905.6967333547036 2945.0198196351225 2989.599975996469 2953.981410984291 3103.929864751263 2918.8804842883787 2772.129338596006 1.0548184015352347 1.0397510066267202 0.9566045979077832 1.1131571342470867 1.0481822377112986 1.0623673934083753 1.0784489505495456 1.0656001398839445 1.1196915748250416 1.0529380587150732 1.0 11.436778855195655 -6.271562177307374 24.974315828784743 1.0627199025558656 1.0193272992836289 0.25215213683008464 0.03801579785331019 990.7456919334127 2444302.079049807 0.006855431438347227 0.016111400620920546 5.351035382940486e-07 6.271562177307374 -0.04339260327223671 SKTDNSSLSS(ph)PLNPK ddPTM_A549_MK2206_60min_R1 2 SKTDNSSLSSPLNPK 15 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 SKTDNSSLS(0.075)S(0.925)PLNPK;SKTDNSS(0.001)LS(0.075)S(0.924)PLNPK 175.51 4.8319999999999995e-28 36866000.0 6691.200000000001 9605.7 8182.4 9572.900000000001 11234.099999999999 8896.7 7944.2 8143.5 15344.5 12553.8 13947.7 True False 7820.51097586636 10094.589100738025 9342.787357826688 11918.260929743807 9581.578771722287 9838.142888848497 9387.558308609598 9297.866063422796 11868.995250131342 9717.887861007242 10484.101153063075 0.745940053581178 0.9628473584298404 0.8911386127838974 1.1367937752357264 0.9139151398708983 0.9383868721997353 0.8954089789439788 0.8868539064702077 1.1320946905079843 0.9269166444629378 1.0 13.35591555785517 -8.754025151509257 24.996993023962595 1.0623780496484847 0.9284114898313314 0.12188239616448715 0.09978212830476971 156.42036242410938 527369.2612002657 0.016062932552532893 0.01803785508055235 1.7618740071837413e-09 8.754025151509257 -0.13396655981715333 SKTDNSSLSS(ph)PLNPK ddPTM_A549_PD325901_60min_R1 2 SKTDNSSLSSPLNPK 15 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 SKTDNSS(0.001)LS(0.087)S(0.913)PLNPK;SKTDNSSLS(0.097)S(0.903)PLNPK 117.26 2.4073e-07 79913000.0 8353.8 10162.2 8459.4 11877.9 9902.3 8999.4 8916.2 9228.8 13301.0 10366.5 9198.8 True False 9201.871626257476 11018.604258244006 9033.505754504647 12611.570906331868 9206.796609080473 8926.111870141562 9255.51087013185 9044.72434414646 12742.005225473462 9711.957420842044 8067.40591599764 1.1406233580003946 1.3658175097393017 1.1197534682854169 1.563274618588754 1.141233837115277 1.1064413967866809 1.147272241722485 1.1211440750998782 1.5794426806027086 1.203851339819565 1.0 12.977889132420463 -11.229948715632222 1.7055453017003421 0.9999192629227325 1.3013241961949544 0.005485454859340155 0.18216554766415008 0.43251757360521503 2.2685307286298984 0.14299006539509748 0.029446393130250655 5.8891319401871135e-12 11.229948715632222 0.30140493327222195 SKTPS(ph)SPCPASK ddPTM_A549_MK2206_60min_R1 3 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 S(0.07)KT(0.055)PS(0.483)S(0.392)PCPASK;S(0.114)KT(0.114)PS(0.385)S(0.385)PCPAS(0.001)K;S(0.058)KT(0.058)PS(0.503)S(0.38)PCPASK 55.213 0.0052848999999999995 74532000.0 3855.1800000000003 4334.4400000000005 4458.24 3676.73 5494.09 4556.5 3791.04 3998.07 5737.709999999999 6512.3 6840.0 True False 4505.840133898328 4555.044482109888 5090.485470052467 4577.529015054684 4685.916638977014 5038.665805640092 4479.822895983401 4564.808666075863 4438.127846240092 5041.16690701122 5141.439225603607 0.8763772041610275 0.885947354862514 0.9900895929494997 0.8903205530971302 0.9114017366269433 0.9800107682977718 0.8713169016322406 0.8878464697868624 0.8632072949805323 0.9804972276842162 1.0 12.327956549334006 -10.959921431565203 1.2368495929282266 0.9997685635507901 0.9041626629443354 0.3910985393694104 0.040199857860157166 0.35904447860104094 0.9804440518938913 0.028749544329077503 0.006743858336204879 1.0966765785134696e-11 10.959921431565203 -0.09560590060645469 SKTPSS(ph)PCPASK ddPTM_A549_PD325901_60min_R1 2 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 SKT(0.001)PS(0.039)S(0.96)PCPASK;S(0.001)KT(0.003)PS(0.109)S(0.888)PCPASK 94.48700000000001 7.2957e-05 103829000.0 10844.8 10758.2 12946.6 12072.0 12425.5 12319.8 11889.0 13181.099999999999 9558.7 12606.8 13335.0 True False 11945.756112480201 11664.83126990619 13825.234130230268 12817.660022498774 11552.77574564792 12219.471633416677 12341.442400910435 12918.192620127089 9156.981080274658 11810.804496510056 11694.879537529734 1.0214518306191513 0.9974306475302189 1.1821613113554585 1.0960061607617209 0.9878490589470551 1.0448565625839485 1.0552859789026328 1.1046024526094222 0.7829906285814426 1.0099124543017575 1.0 13.513589380914564 -8.745282549266483 24.999823605597967 0.8975233440022474 1.061084069839474 0.34006189398559084 0.07705161494276859 174.23670566998777 269600.15063220245 0.015385758562992433 0.017419622219006295 1.7977009616155311e-09 8.745282549266483 0.16356072583722647 SKTQLS(ph)PSIK ddPTM_A549_MK2206_60min_R1 1 SKTQLSPSIK 10 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.013)KT(0.011)QLS(0.758)PS(0.219)IK 48.14 0.008856000000000001 15958000.0 3174.2 3575.9 3996.1 3882.9 4753.7 3852.3 3861.3 3100.2 5298.1 4867.9 4553.0 True False 3709.9273582608475 3757.8980360961823 4562.807068905367 4834.210674310005 4054.4370271883117 4259.947829050217 4562.8482285232285 3539.6628439643096 4098.088809327177 3768.238009096622 3422.3644435925744 1.08402463250419 1.0980414558513198 1.3332323731471538 1.4125353257922955 1.1846888588324127 1.2447382209763733 1.3332443998084111 1.0342740822332186 1.197443719648183 1.1010627509737019 1.0 11.740777683579944 -10.435765320497174 0.4492982874909725 0.9625555625554509 1.234602935363019 0.24051280185955037 0.11184540110968917 1.3644954325075707 0.41730828238528705 0.16459915388156207 0.031835445979312045 3.666356398553104e-11 10.435765320497174 0.2720473728075681 SKTQLS(ph)PSIK ddPTM_A549_PD325901_60min_R1 1 SKTQLSPSIK 10 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.04)KT(0.025)QLS(0.861)PS(0.073)IK 67.358 0.0012887999999999999 27585000.0 4583.1 4860.7 5323.2 5958.4 6007.4 6260.1 6332.7 7037.9 5942.2 5840.3 5904.8 True False 5048.3729381001 5270.328247628135 5684.464363002004 6326.436835491775 5585.460948404916 6209.119821129541 6573.694363886407 6897.52356337426 5692.469998557129 5471.542461288167 5178.547033611213 0.9748628148655942 1.0177233524039113 1.097694841063941 1.2216625231807716 1.0785768502540654 1.1990080964466336 1.269409029447841 1.3319418590979437 1.0992407641777342 1.0565786939416164 1.0 12.338331656426393 -4.098607073826039 16.13540232299296 1.096691005990756 1.098546843448212 0.0 0.11426958749764625 0.0 0.0 0.016868340493355418 0.0 7.968799983182853e-05 4.098607073826039 0.0018558374574559888 SKTQLS(ph)PSIKR ddPTM_A549_PD325901_60min_R1 2 SKTQLSPSIKR 11 2 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.001)KT(0.008)QLS(0.736)PS(0.255)IKR;S(0.003)KT(0.029)QLS(0.939)PS(0.028)IKR 54.812 0.0037435000000000003 96174000.0 19788.8 20490.8 22435.0 22986.0 24016.0 31206.0 28196.0 32075.0 26010.0 28337.0 28941.0 True False 21797.744408255392 22217.631628468862 23957.574012614576 24405.793015006366 22329.199010702225 30951.868682316333 29269.014209443238 31435.23896264927 24916.890152211472 26547.796983977318 25381.440472114584 0.8588064350486162 0.8753495158353344 0.943901274592183 0.9615605954996874 0.8797451443007849 1.2194685607509834 1.1531660010234546 1.2385128021865313 0.9816972436842782 1.0459531252035974 1.0 14.631486328279461 SKTQLSPS(ph)IK ddPTM_A549_MK2206_60min_R1 1 SKTQLSPSIK 10 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.02)KT(0.021)QLS(0.428)PS(0.531)IK 48.14 0.008856000000000001 22247000.0 3615.3 5070.9 4906.2 3915.9 5612.5 4836.8 4546.3 3981.2 6619.5 5848.6 5427.2 True False 4225.474254401253 5328.987150434895 5601.972933976502 4875.295675791431 4786.908684833792 5348.626965592011 5372.3038617396105 4545.547291913653 5120.193819169376 4527.397197970889 4079.4764568999835 1.0357883662385967 1.3062919241564692 1.373208791167647 1.195078762507725 1.173412504130834 1.3111062221098004 1.3169101276838973 1.1142477079933535 1.2551105204956226 1.1097985846476197 1.0 11.994168299236582 -10.828850967346916 0.607762542225379 0.9578874034480938 1.2422835601912978 0.2951478412006373 0.09918507045832696 0.8392819462901611 0.4177863673646657 0.13395702803311127 0.019159541582067847 1.4830269138936405e-11 10.828850967346916 0.28439615674320406 SKTQLSPS(ph)IK ddPTM_A549_PD325901_60min_R1 1 SKTQLSPSIK 10 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.023)KT(0.023)QLS(0.4)PS(0.553)IK 59.898 0.0023081 37524000.0 5111.1 4408.8 4646.8 5186.7 6472.4 6440.6 5200.9 5993.0 5326.3 5544.1 5696.8 True False 5629.975109407049 4780.345048684943 4962.159791478377 5507.070679149638 6017.800952567833 6388.149888974126 5398.823095541685 5873.4649135824475 5102.454133707184 5194.044579837976 4996.12971499058 1.126867281390764 0.9568096349343796 0.9932007522922636 1.1022673535929242 1.20449253639508 1.2786197023281591 1.080601065929663 1.1756029664240855 1.0212813567265044 1.039613636181936 1.0 12.286595218922661 -8.880446729123852 7.520348371169491 1.0093683220595693 1.1122611237281006 0.19178993135603484 0.08574776219206437 0.2719340107436335 16.914968994310318 0.01615084515995495 0.017150593124812524 1.3169014349003685e-09 8.880446729123852 0.10289280166853132 SKTS(ph)PVVSGSSSK ddPTM_A549_PD325901_60min_R1 1 SKTSPVVSGSSSK 13 1 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.012)KT(0.104)S(0.883)PVVS(0.001)GSSSK 69.71600000000001 0.00025089999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SKVGS(ph)TENIK ddPTM_A549_MK2206_60min_R1 3 SKVGSTENIK 10 1 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.003)KVGS(0.903)T(0.095)ENIK;S(0.013)KVGS(0.885)T(0.102)ENIK;S(0.001)KVGS(0.966)T(0.034)ENIK 103.75 0.00030223 196053000.0 7017.799999999999 7711.9 7266.5 7226.200000000001 9110.4 7530.200000000001 8315.400000000001 7675.4 10438.3 11473.5 11188.300000000001 True False 8202.233071262996 8104.402769811837 8296.998965541612 8996.61932439645 7770.272228473901 8327.040765857791 9826.200543718975 8763.411454926674 8074.041716539873 8881.628381308183 8409.936328628777 0.9753026361616168 0.9636699319854712 0.9865709609830566 1.0697606941173274 0.9239394835871282 0.99014314026507 1.1684036786662708 1.0420306542743505 0.9600597913035959 1.0560874701362113 1.0 13.037879162583739 -4.358651706903034 17.091072985482338 0.9968396263781473 0.9761180517082036 0.0 0.06653486863529189 0.0 0.0 0.008490052241298231 0.0 4.3787312746339574e-05 4.358651706903034 -0.02072157466994362 SKVGS(ph)TENIK ddPTM_A549_PD325901_60min_R1 3 SKVGSTENIK 10 1 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 SKVGS(0.97)T(0.03)ENIK;SKVGS(0.929)T(0.071)ENIK;SKVGS(0.973)T(0.027)ENIK 169.04 1.7887e-10 340904000.0 22138.5 21420.0 20541.8 21449.3 25155.0 21103.3 23225.8 23776.2 22339.4 23919.4 23976.5 True False 24385.98422249768 23225.13857349654 21935.890075878156 22774.174546105292 23388.19958003889 20931.441721576804 24109.670528645438 23301.965038931943 21400.55270535612 22409.12500188966 21027.542499556184 1.159716320773689 1.1045103617784504 1.0431979902711477 1.0830640121919133 1.1122650010353103 0.9954297665558679 1.1465757602988702 1.1081639730093882 1.0177391250455354 1.0657034697403482 1.0 14.35999263090906 -8.821162740143132 5.923625427300508 1.0079231344174258 1.0914243662985565 0.26161368900457194 0.04637991740653345 0.13185633813561468 9.177193197067066 0.007294754386077107 0.007769613280248632 1.509514398364334e-09 8.821162740143132 0.08350123188113079 SKVGS(ph)TENIKHQPGGGR ddPTM_A549_MK2206_60min_R1 1 SKVGSTENIKHQPGGGR 17 2 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.201)KVGS(0.598)T(0.201)ENIKHQPGGGR 43.476000000000006 0.016267 6934400.0 1016.9 1100.8 1013.8 1188.2 1283.3 783.09 817.35 735.67 1681.6 1980.7 1734.6 True False 1188.5278591819851 1156.8260181030457 1157.5720843963513 1479.3090533403247 1094.5282699772308 865.956064026928 965.8519150502319 839.9534753948855 1300.7202849633986 1533.2584943441075 1303.8509474754396 0.9115519388801712 0.8872379318686169 0.8878101340016523 1.1345691439689582 0.8394581237191978 0.664152651576947 0.740768656816446 0.6442097365663091 0.9975989107358455 1.1759461442374641 1.0 10.348563238871588 -8.920094827904025 24.99999821439838 0.9989530119175052 0.8414079655200041 0.31310508947866755 0.1371407941860658 34.1829343450842 10692.812106015655 0.023473594005372363 0.024989492127299184 1.2020019496555576e-09 8.920094827904025 -0.1575450463975011 SKVGS(ph)TENIKHQPGGGR ddPTM_A549_PD325901_60min_R1 3 SKVGSTENIKHQPGGGR 17 2 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.176)KVGS(0.792)T(0.032)ENIKHQPGGGR;S(0.013)KVGS(0.789)T(0.198)ENIKHQPGGGR;S(0.014)KVGS(0.785)T(0.201)ENIKHQPGGGR 114.37 4.3313999999999996e-10 80448000.0 5162.8 5798.5 5700.200000000001 7949.5 7496.9 10740.2 7373.6 8924.7 10347.4 7351.3 8666.3 True False 5686.923655347521 6287.15994483752 6087.049850087174 8440.522560375579 6970.343606900956 10652.735372101959 7654.206382988738 8746.689857208292 9912.53476205279 6887.137663419291 7600.40004020202 0.7482400433222935 0.8272143455057408 0.8008854557510079 1.1105366185634655 0.9171022012040938 1.401601930918732 1.0070794093076827 1.150819668825722 1.3042122400953664 0.9061546269920063 1.0 12.891859640169208 -6.336163554086433 1.2908757658672818 1.1484862066252597 0.7603116567431856 0.43775670520196563 0.14905301932375306 0.2988391082029391 0.9114597496049114 0.021857317834138107 0.08954700630349367 4.6114387636206163e-07 6.336163554086433 -0.3881745498820741 SKVGST(ph)ENIK ddPTM_A549_MK2206_60min_R1 1 SKVGSTENIK 10 1 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.125)KVGS(0.236)T(0.639)ENIK 49.298 0.011661 205250000.0 2753.8 3105.4 3215.5 2657.9 3829.8 3089.6 3389.1 3065.3 4311.9 4484.1 4931.1 True False 3218.5741160540388 3263.4515957641684 3671.5062511111328 3309.0856193176655 3266.441493305383 3416.539421289501 4004.8556007790307 3499.8156620875448 3335.2615346893917 3471.1386956572996 3706.571778563443 0.8683425840201758 0.8804501276996679 0.9905396335084868 0.8927617801590689 0.8812567753837911 0.9217518573493403 1.0804743142816444 0.9442190442198773 0.8998238086143417 0.9364822545005752 1.0 11.855869734421676 -7.538134126952363 24.999796860829786 0.9612468181079917 0.9053406181359125 0.2776059009722077 0.05255174216469588 327.84630415908055 537257.3028837142 0.008998338562570787 0.01334902310286934 2.8964489139752265e-08 7.538134126952363 -0.05590619997207924 SKVGST(ph)ENIK ddPTM_A549_PD325901_60min_R1 1 SKVGSTENIK 10 1 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.009)KVGS(0.364)T(0.628)ENIK 88.28200000000001 0.00027999 320820000.0 12994.0 13147.0 12913.0 13278.0 15650.0 13717.0 13140.0 15634.0 14867.0 16174.0 14367.0 True False 14313.141314322773 14254.943829400514 13789.353832177052 14098.151903474049 14550.797989569026 13605.293299856854 13640.049890483893 15322.167605364255 14242.19169138516 15152.770879727892 12599.950079916742 1.1359680969797423 1.1313492306705002 1.09439749718978 1.1189053777241003 1.1548298126007477 1.0797894605584624 1.0825479310608526 1.2160498659265722 1.130337152215072 1.2026056280873787 1.0 13.621130397433433 -10.567086605520734 0.877178597648341 1.0003631877577162 1.1260943744116882 0.0 0.06930495086387817 0.3081005024777561 0.42663382075711836 0.024256575497697545 0.006855796707907524 2.709651228626199e-11 10.567086605520734 0.1257311866539721 SKVPVLDEGLTS(ph)VETYTPAIR ddPTM_A549_MK2206_60min_R1 1 SKVPVLDEGLTSVETYTPAIR 21 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SKVPVLDEGLT(0.031)S(0.247)VET(0.247)Y(0.228)T(0.247)PAIR 46.361999999999995 0.0049394 914800.0 748.31 1367.9 1127.4 831.22 1880.5 1505.2 1369.3 1514.3 2172.6 1722.6 1534.5 True False 874.6064335770197 1437.5202672267037 1287.2822725867486 1034.8689373148839 1603.880941083286 1664.4792649291035 1618.0840854937085 1728.9566623492544 1680.5095689292812 1333.4634636023418 1153.4412999544932 0.7582582950788442 1.246288187602974 1.1160362236357724 0.8972012163564046 1.390518044695091 1.4430550258559083 1.40283175707125 1.4989550507836569 1.4569528323596377 1.156073970695302 1.0 10.17172887002723 -6.765024431165731 24.963833958981876 1.2841552402292833 1.0296911540682723 0.4111831270443296 0.1832515765384194 108.91534025905968 758419.8489765764 0.033187276297177826 0.06451638934716258 1.7178117492177423e-07 6.765024431165731 -0.254464086161011 SKVPVLDEGLTSVET(ph)YTPAIR ddPTM_A549_PD325901_60min_R1 1 SKVPVLDEGLTSVETYTPAIR 21 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SKVPVLDEGLT(0.002)S(0.054)VET(0.548)Y(0.006)T(0.391)PAIR 67.23899999999999 0.00044707 1679300.0 1616.6 2053.6 2248.7 1560.2 1976.9 1977.1 1879.0 2315.0 2310.6 1928.0 2478.6 True False 1780.7160419219806 2226.6640791098266 2401.3103045315984 1656.5700105287112 1838.0493639347599 1960.9991531054159 1950.506373228252 2268.8255089176337 2213.493517327943 1806.265750965461 2173.7479131399464 0.8191916050420782 1.0243432854610284 1.104686652033603 0.7620800924132093 0.8455669366369741 0.9021281360416727 0.8973010906360226 1.0437390164714864 1.0182843668061698 0.8309453640170893 1.0 11.085968927166189 -8.255048184576458 24.516223381365656 1.0115083914529852 0.9117191703249803 0.03949866117591272 0.10417206552843288 465.1876244118794 1784431.9958420342 0.014502041620797905 0.01847956218494403 5.558425836217231e-09 8.255048184576458 -0.09978922112800492 SKYDEIFYNLAPADGKLS(ph)GSK ddPTM_A549_MK2206_60min_R1 5 SKYDEIFYNLAPADGKLSGSK 21 2 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 SKYDEIFYNLAPADGKLS(0.846)GS(0.154)K;SKYDEIFYNLAPADGKLS(0.829)GS(0.171)K;SKYDEIFYNLAPADGKLS(0.968)GS(0.032)K;SKYDEIFYNLAPADGKLS(0.971)GS(0.029)K;SKYDEIFYNLAPADGKLS(0.993)GS(0.007)K 174.86 9.2982e-36 506961200.0 34069.979999999996 38629.86 35853.24 33980.0 53305.48 42695.26 39813.15 40628.15 63229.1 59864.3 57089.4 True False 39820.159692961985 40595.954872527334 40937.768553129434 42305.101525420185 45464.31450534236 47213.244074380134 47046.68400523906 46387.31468099112 48907.809806124686 46340.913052438 42912.52639271556 0.9279379015941949 0.9460164265560121 0.95398178560931 0.9858450452966458 1.0594648772079744 1.1002205659556465 1.0963391801892437 1.080973752430139 1.1397094022976664 1.0798924451184122 1.0 15.389111219040531 -6.631413479353079 2.2392743933293393 1.07384292723653 0.9425510218068528 0.7850667973704674 0.03226356515550382 0.17276161538102278 1.748752875851002 0.007523638436227615 0.018144700099582103 2.3366115582990821e-07 6.631413479353079 -0.13129190542967717 SKYDEIFYNLAPADGKLS(ph)GSK ddPTM_A549_PD325901_60min_R1 4 SKYDEIFYNLAPADGKLSGSK 21 2 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 SKYDEIFYNLAPADGKLS(0.982)GS(0.018)K;SKYDEIFYNLAPADGKLS(0.823)GS(0.177)K;SKYDEIFYNLAPADGKLS(0.986)GS(0.014)K;SKYDEIFYNLAPADGKLS(0.993)GS(0.007)K 224.88 2.2253999999999998e-76 981949000.0 47507.7 47575.3 52769.6 49081.8 59176.8 53014.1 52725.8 57725.3 56134.5 54518.9 58426.4 True False 52330.64673067971 51584.63749652988 56350.86238538297 52113.471313144495 55020.42571687717 52582.37074636883 54732.309171664834 56573.923606878234 53775.36217798212 51076.56734974633 51240.323195465106 1.0212786233032798 1.0067195965909763 1.0997366697009858 1.017040253909965 1.0737720272956166 1.0261912389932486 1.068149179365613 1.104089905738244 1.0494735166452145 0.99680416056132 1.0 15.644991954975774 -10.37949678732611 0.9761399247166609 1.002887290724035 1.051946168934855 0.2961445163825359 0.031280045011419365 0.5032954942635831 0.9267557161507175 0.0147755079943445 0.0056159844312320744 4.173526858016138e-11 10.37949678732611 0.04905887821082011 SKYDEIFYNLAPADGKLSGSK ddPTM_A549_MK2206_60min_R1 2 SKYDEIFYNLAPADGKLSGSK 21 2 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 0 ; 127.05 3.4664e-17 33063000.0 6247.799999999999 7294.2 7003.1 6343.5 10504.400000000001 8012.599999999999 8291.5 8767.6 11887.0 11730.6 10307.7 False True 7302.275895955559 7665.443623952794 7996.244884825492 7897.657784770535 8959.216675094543 8860.48801366658 9797.958223085589 10010.434149648885 9194.613479638398 9080.64931274448 7748.013611952379 0.9424707107755711 0.9893430765438759 1.0320380532747364 1.01931387582842 1.1563243334102713 1.1435818852974207 1.2645767952667104 1.2920000726646133 1.1867059016848447 1.1719970779008864 1.0 12.919610773177201 -6.654844430038507 4.5247883100225845 1.1274419467924546 0.9935884660994905 0.47466767734927007 0.08148537198507638 0.2432864418264146 8.593590306055484 0.015609718300876018 0.03318947835720943 2.2138876110705335e-07 6.654844430038507 -0.1338534806929641 SKYDEIFYNLAPADGKLSGSK ddPTM_A549_PD325901_60min_R1 2 SKYDEIFYNLAPADGKLSGSK 21 2 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 0 ; 114.84 5.185800000000001e-15 22891000.0 8003.5 7889.4 7514.799999999999 7346.9 9526.3 8462.0 9329.4 9279.7 9339.0 9570.9 8823.599999999999 False True 8816.00942813471 8554.267425851705 8024.7995181634105 7800.701326979482 8857.205551950887 8393.088277567158 9684.435422243567 9094.609103716177 8946.514307247327 8966.591740619986 7738.353137408874 1.1392617100292584 1.105437717038077 1.037016452424456 1.0080570359692171 1.1445853393706262 1.0846091059082263 1.2514853290200612 1.1752641605034626 1.156126393870285 1.1587209295571612 1.0 12.917810851898064 -3.84596398849601 1.9853804999513323 1.0927904304485327 10.91671892901146 0.0 0.07515881230891938 1193.693002124571 28.60588740942567 0.012172664742257354 52613.185267028755 0.00014257258092466792 3.84596398849601 9.823928498562926 SLADIAR ddPTM_A549_PD325901_60min_R1 2 SLADIAR 7 0 G3V4X5;P25788-2;P25788 G3V4X5 PSMA3 Proteasome subunit alpha type-3 0 ; 91.906 0.012792 2103600.0 1004.6 743.67 865.65 860.99 1007.0 1032.6 991.06 1030.8 1262.5 820.41 1018.4 False True 1106.5862524525678 806.3416808100915 924.3982145763234 914.171396849836 936.2717939614056 1024.1908479574386 1028.775330628841 1010.2398853530434 1209.4415154620133 768.6091725879531 893.1432561694998 1.2389795755705297 0.9028133787499201 1.0349943395876597 1.0235439729685936 1.0482884884300363 1.1467262848179294 1.151859260563684 1.131106212105039 1.3541405671572206 0.860566507420493 1.0 9.80274778549027 -7.298382226359293 2.934097966204358 1.1668428411853766 1.0374176699832682 0.0 0.14051272556765057 0.3987458910583507 6.866187343682151 0.021347998037851167 0.036708341755362583 5.0305766845948016e-08 7.298382226359293 -0.1294251712021084 SLAFEEGS(ph)QSTTISSLSEK ddPTM_A549_MK2206_60min_R1 1 SLAFEEGSQSTTISSLSEK 19 0 Q13315 Q13315 ATM Serine-protein kinase ATM 1 SLAFEEGS(0.971)QS(0.014)T(0.014)T(0.002)ISSLSEK 101.96 2.2598e-09 963460.0 411.97 788.04 533.88 405.87 680.96 941.93 581.33 758.04 981.84 830.6 895.9 True False 481.5004643005234 828.1478700090147 609.5922118933947 505.30816822019654 580.7916860622576 1041.6044073974695 686.9501361425972 865.4944914001373 759.4548076762985 642.966883123247 673.4233044178754 0.7150041602981722 1.229758258403141 0.9052140130795474 0.7503574124999995 0.8624466695050136 1.5467305639175337 1.020086670057275 1.2852161273929972 1.1277524889531272 0.9547737342993264 1.0 9.395369837560937 SLAFEEGS(ph)QSTTISSLSEK ddPTM_A549_PD325901_60min_R1 2 SLAFEEGSQSTTISSLSEK 19 0 Q13315 Q13315 ATM Serine-protein kinase ATM 1 SLAFEEGS(0.307)QS(0.307)T(0.307)T(0.064)IS(0.014)S(0.003)LSEK;SLAFEEGS(0.776)QS(0.086)T(0.121)T(0.016)ISSLSEK 98.796 7.570100000000001e-07 4695000.0 2208.6000000000004 2292.9 2496.3999999999996 2433.69 3072.2 2892.3 2755.3 2819.1000000000004 3045.7 3038.5 2960.7 True False 2432.815446114615 2486.1307299332516 2665.8207160726997 2584.0135039889883 2856.4192705146297 2868.7460677390104 2860.154449258011 2762.8708389588332 2917.699820707053 2846.648591446345 2596.552669423641 0.9369405345644806 0.9574736377233204 1.026676927244628 0.9951708410993119 1.100081390279933 1.1048287606566396 1.1015199048101274 1.064053454988113 1.1236821247899806 1.0963184475199643 1.0 11.342381774538257 -5.95758406175627 1.1935691634876837 1.0681528506533338 0.9307269943286813 0.6363925335459089 0.03777307319898322 0.4447499871833522 0.9952686601189175 0.007593256593303236 0.05525385617533152 1.10259479566522e-06 5.95758406175627 -0.13742585632465243 SLANGT(ph)PPMGAASK ddPTM_A549_MK2206_60min_R1 2 SLANGTPPMGAASK 14 0 A0A1B0GV68 A0A1B0GV68 1 S(0.002)LANGT(0.995)PPMGAAS(0.003)K;S(0.004)LANGT(0.907)PPMGAAS(0.089)K 59.227 0.0040515 2619700.0 792.4100000000001 932.1400000000001 1176.8400000000001 1137.8899999999999 1339.55 1205.14 1106.9099999999999 871.81 1467.3400000000001 1871.3000000000002 1934.77 True False 926.1494354355369 979.5819445081512 1343.7336080104574 1416.673101081824 1142.5039694911547 1332.6671148928117 1308.0212189248825 995.3917373061504 1134.9898328604856 1448.5720303257062 1454.3132120644868 0.6368294173170654 0.6735701335736162 0.9239643818561925 0.9741182912522465 0.7855969126961999 0.9163549528653522 0.8994081935541699 0.6844411018539334 0.7804301187976543 0.9960523072394903 1.0 10.506122297268732 -10.7447804873081 0.9871968456771903 1.0005191790326393 0.8132952211159821 0.3158467086274708 0.10696144110368404 0.5913702577187754 1.020020783848195 0.07751086728091834 0.01969162462887105 1.7997803782335634e-11 10.7447804873081 -0.18722395791665725 SLAPDRS(ph)DDEHDPLDNT(ph)SRPR ddPTM_A549_MK2206_60min_R1 2 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 2 S(0.001)LAPDRS(0.999)DDEHDPLDNT(0.583)S(0.417)RPR;S(0.017)LAPDRS(0.98)DDEHDPLDNT(0.578)S(0.425)RPR 80.847 7.1061e-05 9169900.0 513.15 478.98 369.52 449.03999999999996 560.48 567.57 514.46 535.15 606.04 839.4300000000001 835.01 True False 599.7571746870252 503.3580361110074 421.92349243059726 559.0548201581713 478.0341344633662 627.6298806775258 607.9307227218969 611.0091513281407 468.7729076470135 649.8021799905456 627.6539718963842 0.9555538585614746 0.8019674193890131 0.6722230899866753 0.8907054606362986 0.7616205040797258 0.9999616170375125 0.9685762377717523 0.9734808966189553 0.7468651974441748 1.035287290586632 1.0 9.293825604603622 -7.239348294633098 24.908531636879086 0.9002434847005917 0.8117281685042423 0.22072231566915845 0.10474247667311819 1374.9529149668667 1550311.8136652529 0.017407868253121846 0.03013704960856086 5.7630409478960016e-08 7.239348294633098 -0.08851531619634934 SLAPDRS(ph)DDEHDPLDNT(ph)SRPR ddPTM_A549_PD325901_60min_R1 2 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 2 S(0.004)LAPDRS(0.996)DDEHDPLDNT(0.578)S(0.422)RPR;S(0.368)LAPDRS(0.631)DDEHDPLDNT(0.556)S(0.445)RPR 73.34100000000001 0.00015874 10195300.0 722.49 485.47 364.1 378.52 475.03 392.19 517.76 676.71 569.29 569.46 672.0 True False 795.8366529309732 526.3822606571131 388.8100155111641 401.9003207187076 441.6655315645348 388.9961346701799 537.463640129143 663.2124881812747 545.3647210593026 533.5041984153486 589.3482601589784 1.3503673578611972 0.893159946743747 0.6597287916083463 0.681940285376076 0.7494134816744759 0.6600445966621622 0.9119627162115667 1.1253320540937395 0.9253691881811764 0.905244376680495 1.0 9.202976599255035 -7.9931092820380085 24.87859049811503 0.977855630499666 0.8141755380316749 0.12576082772958064 0.18908812867279287 248.10620808381256 895768.9634773416 0.029318740066380213 0.04045913835064894 1.0159930051719447e-08 7.9931092820380085 -0.1636800924679911 SLAPDRS(ph)DDEHDPLDNTSR ddPTM_A549_MK2206_60min_R1 3 SLAPDRSDDEHDPLDNTSR 19 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SLAPDRS(1)DDEHDPLDNTSR;SLAPDRS(1)DDEHDPLDNTSR;S(0.454)LAPDRS(0.542)DDEHDPLDNT(0.002)S(0.002)R 125.39 3.079e-23 15570100.0 3042.3999999999996 3718.9 3368.2 2909.1 4388.8 2966.6000000000004 3481.4 3840.1000000000004 4549.200000000001 4513.299999999999 4834.2 True False 3555.882740461472 3908.176125293798 3845.861407243825 3621.82963059446 3743.213333808204 3280.5236429302954 4113.925316028481 4384.445934813026 3518.8134635796237 3493.742395377017 3633.7347228673893 0.9785752157646544 1.0755259872712575 1.0583770419567242 0.9967237310423324 1.0301283993715493 0.9027966797591723 1.132147949639585 1.206594941348181 0.9683737894886612 0.961474257708085 1.0 11.827237385584374 SLAPDRS(ph)DDEHDPLDNTSR ddPTM_A549_PD325901_60min_R1 3 SLAPDRSDDEHDPLDNTSR 19 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.131)LAPDRS(0.867)DDEHDPLDNT(0.001)S(0.001)R;S(0.03)LAPDRS(0.97)DDEHDPLDNTSR;S(0.002)LAPDRS(0.995)DDEHDPLDNT(0.001)S(0.002)R 81.888 5.5655e-05 27983100.0 9497.1 10439.3 9429.7 9570.5 9898.599999999999 10188.5 9350.2 9473.400000000001 9463.4 10880.1 13413.8 True False 10461.238600604498 11319.05644772654 10069.656147392545 10161.648048817475 9203.356484316164 10105.528233986413 9706.02697762577 9284.445605261473 9065.68620785998 10193.128629190518 11763.98763708409 0.8892595711021589 0.9621785398724004 0.8559730304076114 0.8637928194334805 0.7823330632636891 0.8590223439312662 0.8250626638733513 0.7892260593672967 0.7706303753058915 0.8664688321380337 1.0 13.522089552742314 -10.951121228159359 1.2322768301316007 0.9993926636753592 0.8381640538057115 0.11225001807121238 0.06429200525503576 0.30386462962169547 0.8252416374890102 0.04079137916019721 0.009661530932840601 1.1191254492526044e-11 10.951121228159359 -0.1612286098696477 SLAPDRS(ph)DDEHDPLDNTSRPR ddPTM_A549_MK2206_60min_R1 5 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.005)LAPDRS(0.99)DDEHDPLDNT(0.003)S(0.003)RPR;SLAPDRS(1)DDEHDPLDNTSRPR;S(0.004)LAPDRS(0.81)DDEHDPLDNT(0.093)S(0.093)RPR;SLAPDRS(1)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR 237.98 1.1910999999999997e-86 1391200400.0 16668.000000000004 21087.7 20406.800000000003 17783.6 28322.799999999996 24750.7 19938.3 25028.0 35555.700000000004 35617.700000000004 37176.4 True False 19481.150906525072 22160.97385715079 23300.791094751887 22140.58279833613 24156.553638986272 27369.80264581502 23560.831024464478 28575.795645035392 27502.390720785643 27571.63683243302 27944.473863557003 0.6971378671019054 0.793036002944804 0.8338246484267845 0.7923063037951896 0.8644483255234717 0.979435246462399 0.8431302424766949 1.022592008157352 0.9841799439513552 0.9866579334095029 1.0 14.770275391852614 -6.386976457849716 0.4014235776501492 1.003192612342609 0.6569555822380442 0.8006657185920172 0.04624875437525833 0.725519503648028 0.1398779641353121 0.012112923449037897 0.10440632236130011 4.102263398530453e-07 6.386976457849716 -0.34623703010456475 SLAPDRS(ph)DDEHDPLDNTSRPR ddPTM_A549_PD325901_60min_R1 7 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SLAPDRS(1)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;S(0.171)LAPDRS(0.827)DDEHDPLDNT(0.001)S(0.001)RPR 258.02 3.529699999999999e-99 2071589000.0 19304.93 20066.3 21046.539999999997 20791.86 23267.550000000003 22790.050000000003 20680.82 23989.56 24617.030000000002 24855.780000000002 26642.199999999997 True False 21264.75228206166 21757.357523685972 22474.884767526324 22076.125970459878 21633.3175566899 22604.45538881699 21467.839922078947 23511.06940635426 23582.4618371278 23286.381808886035 23365.37829882073 0.9100966399989727 0.9311793391671336 0.9618883323905203 0.9448221076554997 0.925870631325569 0.9674337431959257 0.9187884590408042 1.006235341267335 1.0092908206120517 0.9966190793521762 1.0 14.51208477499802 -8.271535168259067 24.916473292700246 1.0046485216547747 0.9389012274109891 0.7887054679037603 0.016380060428510895 207.70332777605572 512612.2354878279 0.0025430959985468468 0.003093736288344941 5.3513681775610965e-09 8.271535168259067 -0.06574729424378556 SLAPDRSDDEHDPLDNT(ph)SRPR ddPTM_A549_MK2206_60min_R1 1 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SLAPDRS(0.136)DDEHDPLDNT(0.432)S(0.432)RPR 99.838 2.0238e-07 6222800.0 1458.6 1727.0 1622.5 1415.5 2222.7 1724.2 1601.1 2220.5 2623.9 2794.3 2978.4 True False 1704.7760206537946 1814.8969233865912 1852.5948973496538 1762.2975635442099 1895.743774392885 1906.6536995686688 1891.9991450259097 2535.26267499605 2029.5908395072913 2163.065689274368 2238.781080341781 0.7614750882178872 0.810662971615573 0.8275015871881629 0.7871683296855316 0.8467749665382527 0.8516481206271368 0.8451023468257423 1.1324299178948782 0.9065606536202486 0.9661800826654057 1.0 11.128497745524896 -8.026593790744661 24.61752028135838 0.9688789077436893 0.8176896244766773 0.682852516112324 0.0586551651045165 319.16650636043636 295447.6187146279 0.009826737205583871 0.012708084362016878 9.406026744459544e-09 8.026593790744661 -0.1511892832670121 SLAQVEEPAIENVKPPGS(ph)PVAK ddPTM_A549_MK2206_60min_R1 2 SLAQVEEPAIENVKPPGSPVAK 22 1 Q9NXL9;Q9NXL9-4 Q9NXL9 MCM9 DNA helicase MCM9 1 SLAQVEEPAIENVKPPGS(1)PVAK;SLAQVEEPAIENVKPPGS(1)PVAK 122.5 7.2282e-16 41879000.0 2631.8 3039.5 2827.8999999999996 2877.4 4118.799999999999 2691.3 2353.8999999999996 2538.07 5037.0 4094.3999999999996 3908.3999999999996 True False 3075.983498667664 3194.197567245825 3228.9387428136115 3582.363129171394 3512.929976141366 2976.091579659646 2781.5731606248746 2897.8491950133875 3896.1275424361547 3169.4721963157003 2937.8364136475325 1.0470234096011535 1.0872618885133913 1.0990873173924123 1.219388224793509 1.1957541134088585 1.0130215439615362 0.9468100904812988 0.9863888886228018 1.3261894107980083 1.0788457048160063 1.0 11.520538349790442 SLAQVEEPAIENVKPPGS(ph)PVAK ddPTM_A549_PD325901_60min_R1 3 SLAQVEEPAIENVKPPGSPVAK 22 1 Q9NXL9;Q9NXL9-4 Q9NXL9 MCM9 DNA helicase MCM9 1 S(0.003)LAQVEEPAIENVKPPGS(0.997)PVAK;SLAQVEEPAIENVKPPGS(1)PVAK;SLAQVEEPAIENVKPPGS(1)PVAK 97.06299999999999 1.6079e-07 56939400.0 4669.5 4997.4 5322.3 5200.1 6389.8 5371.5 6357.3 5621.200000000001 5979.599999999999 5841.4 5806.4 True False 5143.544202495787 5418.548436376823 5683.503283589863 5521.29836671603 5941.002491613299 5327.75628491515 6599.230530348041 5509.08075625391 5728.298206619131 5472.57300710044 5092.24960980222 1.0100730711618748 1.0640775397078925 1.1161085412328415 1.0842552486209476 1.166675427727912 1.0462480618898955 1.2959361845980584 1.0818559926146039 1.1249052276605926 1.0746867153892308 1.0 12.314087423068246 -10.664805028239154 0.9152654458268179 0.9995647996543879 1.1126386298465902 0.09626622940025575 0.07424157977593858 0.6371276974929865 0.9438064656903925 0.04752209811251386 0.012425299258316204 2.1636896705464663e-11 10.664805028239154 0.1130738301922023 SLARPGT(ph)PLPSPQAPR ddPTM_A549_MK2206_60min_R1 2 SLARPGTPLPSPQAPR 16 1 O95935 O95935 TBX18 T-box transcription factor TBX18 1 S(0.005)LARPGT(0.994)PLPSPQAPR;SLARPGT(0.999)PLPS(0.001)PQAPR 107.02 2.9903e-07 56765000.0 3587.0 4225.2 3802.2 3570.6 5166.9 4598.5 3856.8 4676.5 6809.4 5944.4 5994.8 True False 4192.397906269822 4440.244632711651 4341.409133252916 4445.397160290326 4406.855854551044 5085.110217762746 4557.530636772176 5339.408196180599 5267.08177237736 4601.555911434903 4506.125711936915 0.9303774848455704 0.9853796623891913 0.9634460755838086 0.9865231119749464 0.9779700204273262 1.128488316313963 1.011407787558853 1.1849221565293404 1.1688714672173128 1.0211778821982682 1.0 12.137671847116497 -7.218519568292315 9.163814344396211 1.0877068276073194 0.9702075375336815 0.4967993031790833 0.05864340664470636 0.3821119894546748 78.84835504957692 0.010629107135982889 0.0183902563985889 6.046171081000191e-08 7.218519568292315 -0.11749929007363791 SLARPGT(ph)PLPSPQAPR ddPTM_A549_PD325901_60min_R1 2 SLARPGTPLPSPQAPR 16 1 O95935 O95935 TBX18 T-box transcription factor TBX18 1 SLARPGT(0.999)PLPSPQAPR;S(0.001)LARPGT(0.999)PLPSPQAPR 95.052 2.4491e-06 96981000.0 5989.1 7128.200000000001 6852.200000000001 8416.5 7514.9 7345.4 6787.5 7344.700000000001 8322.400000000001 7887.5 7712.8 True False 6597.109023057608 7728.9184304200735 7317.231497625929 8936.368089741633 6987.07934899759 7285.581497759607 7045.802026762519 7198.204196694314 7972.638469925592 7389.481903910825 6764.174495467511 0.9753014248047785 1.1426255244596382 1.0817626751836467 1.3211321049936913 1.0329537408710319 1.0770836119975138 1.041635166491302 1.0641659527733405 1.1786565345509403 1.092444009074916 1.0 12.72369816210639 SLAS(ph)IEAK ddPTM_A549_MK2206_60min_R1 2 SLASIEAK 8 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.034)LAS(0.966)IEAK;S(0.113)LAS(0.887)IEAK 114.5 0.0013253 26927000.0 4712.299999999999 8259.7 5548.7 4204.5 7379.5 5159.3 4145.7 5920.6 6833.299999999999 7172.4 6817.9 True False 5507.621035326259 8680.083449968859 6335.589095176593 5234.60268874718 6293.9853255645385 5705.253701533835 4898.920027190002 6759.86318107706 5285.568460537818 5552.14985855186 5124.827265532576 1.074693984784266 1.6937319055312232 1.2362541734405548 1.0214203167300695 1.2281360911215926 1.11325775600379 0.9559190531431311 1.319042151243037 1.031365192752216 1.083382828508831 1.0 12.323287663453977 -6.293274249981025 0.39713495033900864 1.0121725755637905 1.471012769515879 0.19105451428204634 0.17966866437014045 2.3604778259443218 0.4244557268820455 0.04712462169063943 0.4506426548829737 5.090093383352072e-07 6.293274249981025 0.4588401939520885 SLASEAPSQPS(ph)LNGGSPEGVESQDGVDHFR ddPTM_A549_PD325901_60min_R1 1 SLASEAPSQPSLNGGSPEGVESQDGVDHFR 30 0 P38935 P38935 IGHMBP2 DNA-binding protein SMUBP-2 1 SLAS(0.001)EAPS(0.033)QPS(0.482)LNGGS(0.482)PEGVES(0.001)QDGVDHFR 56.021 0.0013210000000000001 4733200.0 1271.0 1222.5 1531.8 1340.0 1282.4 1601.5 1368.2 1406.6 1514.5 1511.5 1627.5 True False 1400.0309843392529 1325.5243653641237 1635.7571594616893 1422.7687566391962 1192.3286480398283 1588.4579149756325 1420.2675997077686 1378.5442595436466 1450.8508318156196 1416.0636320457966 1427.3278175725268 0.980875568389259 0.9286754934955718 1.1460276604456856 0.9968058767739255 0.8353572552573351 1.1128893414808811 0.9950535414655018 0.9658217562719075 1.0164804566641872 0.9921082001008799 1.0 10.479101004529273 SLASEAPSQPSLNGGS(ph)PEGVESQDGVDHFR ddPTM_A549_MK2206_60min_R1 2 SLASEAPSQPSLNGGSPEGVESQDGVDHFR 30 0 P38935 P38935 IGHMBP2 DNA-binding protein SMUBP-2 1 SLASEAPS(0.004)QPS(0.108)LNGGS(0.888)PEGVESQDGVDHFR;SLASEAPS(0.001)QPS(0.116)LNGGS(0.882)PEGVES(0.001)QDGVDHFR 88.68299999999999 1.3097999999999998e-09 5320100.0 1532.44 1987.98 1812.18 1912.2400000000002 2512.3 1648.95 1643.75 1713.45 2941.59 2608.04 3348.3 True False 1791.078407439121 2089.159690650883 2069.1743735464393 2380.7388858437157 2142.743998023687 1823.440794515577 1942.3980979553676 1956.3367847205507 2275.3245617539746 2018.8819526375535 2516.8247016211344 0.7116420966011076 0.8300775533970307 0.8221368664308026 0.9459295612881726 0.8513679942204576 0.7245005158051191 0.7717653504847725 0.7773035537439048 0.9040457050061512 0.8021543778305869 1.0 11.297389020068785 -9.237007278731243 1.3076575429113453 0.9734212074918327 0.8090349946326258 0.08353931938084325 0.08185059628923268 0.21941817280338485 0.7782881175316143 0.015656044758677833 0.013682992709511359 5.794189853423772e-10 9.237007278731243 -0.16438621285920685 SLASKDVES(ph)PSWR ddPTM_A549_MK2206_60min_R1 1 SLASKDVESPSWR 13 1 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 S(0.004)LAS(0.016)KDVES(0.931)PS(0.049)WR 40.085 0.031027 5035000.0 1295.2 1717.7 1351.6 1320.7 2562.6 1598.3 1259.4 1095.0 2621.6 2665.8 2999.1 True False 1513.798095400243 1805.1235931101037 1543.277203856884 1644.2715592884754 2185.644934655692 1767.4310451343256 1488.2166780623515 1250.2196032968582 2027.8117858349462 2063.593928521492 2254.340699050843 0.6715036888779081 0.8007323799238174 0.684580287490111 0.7293802396331539 0.9695273370063033 0.7840123925715738 0.6601560618982496 0.5545832552387688 0.8995143399082165 0.9153868931126241 1.0 11.138489851497457 -8.954747182034378 9.441959850597605 0.9558710239449733 0.7387752349930625 0.4622117350062428 0.10017735487853581 0.21701919458855365 42.84815958300555 0.01848458812310986 0.01952042311351806 1.1098206925847617e-09 8.954747182034378 -0.21709578895191073 SLASKDVES(ph)PSWR ddPTM_A549_PD325901_60min_R1 1 SLASKDVESPSWR 13 1 O00159-3;F5H6E2;O00159-2;O00159 O00159-3 MYO1C Unconventional myosin-Ic 1 SLAS(0.017)KDVES(0.491)PS(0.491)WR 42.708 0.022462 6326100.0 1716.7 1556.1 1652.3 1791.8 1637.0 2292.5 1772.8 1845.0 2772.8 2107.9 2940.7 True False 1890.9781202322542 1687.2380081334252 1764.4350140870538 1902.4754165269476 1522.0227673434172 2273.8306400759534 1840.2648741133823 1808.200027625499 2656.2688586717386 1974.8068342635347 2579.0125426331983 0.7332178843541203 0.6542186128380507 0.6841513893086955 0.7376759069905494 0.5901571792238809 0.8816671506972777 0.7135540613673995 0.7011210677476225 1.0299557736774947 0.7657220744832969 1.0 11.332603074133035 -8.760829768087065 24.999274472342023 1.0141457975110382 0.7116237805149248 0.43401528044977833 0.10051795063044698 4.506425225556995 184801.36028164902 0.010951015839383503 0.012056341476229636 1.7344837361258985e-09 8.760829768087065 -0.30252201699611336 SLATMDS(ph)PPHQK ddPTM_A549_MK2206_60min_R1 3 SLATMDSPPHQK 12 0 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.003)LAT(0.002)MDS(0.995)PPHQK;SLAT(0.002)MDS(0.998)PPHQK;S(0.007)LAT(0.024)MDS(0.968)PPHQK 65.219 0.0014667 22377100.0 5581.33 5924.7300000000005 5940.6 5304.5 6993.6 5473.64 5042.700000000001 5320.799999999999 7550.900000000001 8384.199999999999 8849.2 True False 6523.322053582648 6226.273450432101 6783.066408132729 6604.102738128055 5964.850704365902 6052.856951691832 5958.893316233934 6075.039694266598 5840.633206309546 6490.2033969202075 6651.69941450459 0.9807000658144587 0.9360425152187707 1.0197493881551054 0.9928444336686731 0.8967408676584278 0.9099715087084466 0.8958452486954034 0.9133064072347381 0.8780663169435399 0.9757210890750374 1.0 12.699507260412693 -6.745265356691069 24.968284089940166 0.9302290172109707 0.9817000897565346 0.3382181372959854 0.03851383624587914 322.8552626912147 498397.8432321476 0.007255960157571474 0.015068025533994594 1.7977721292734552e-07 6.745265356691069 0.05147107254556382 SLATMDS(ph)PPHQK ddPTM_A549_PD325901_60min_R1 2 SLATMDSPPHQK 12 0 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 SLATMDS(1)PPHQK;S(0.002)LAT(0.001)MDS(0.997)PPHQK 72.321 0.00048703 38548000.0 5439.5 5569.1 4507.9 5420.200000000001 6781.0 5570.8 5961.2 6197.0 5975.4 6203.0 7232.9 True False 5991.714035651745 6038.427601758153 4813.8332022048235 5754.993443832661 6304.725953180036 5525.4332517928515 6188.056728093802 6073.395973547543 5724.274718013238 5811.341521389394 6343.299153130768 0.9445737763596572 0.9519380145862829 0.7588847831382713 0.9072555629025085 0.9939190634054057 0.871066162639633 0.9755265483639779 0.9574506620186732 0.9024128580137976 0.916138649794118 1.0 12.631017666650171 -14.999999999999998 0.2260313827591298 1.459431458282466 0.9036077803034956 0.0 0.06514669062022294 53.05779119119022 0.6596689122694951 10.875989719690917 0.0387558096786184 1.000000000000004e-15 14.999999999999998 -0.5558236779789703 SLDDS(ph)EEDDDEDSGHSSR ddPTM_A549_MK2206_60min_R1 2 SLDDSEEDDDEDSGHSSR 18 0 B4DFN3;Q13563-3;Q13563 B4DFN3 PKD2 Polycystin-2 1 S(0.005)LDDS(0.995)EEDDDEDSGHSSR;S(0.034)LDDS(0.966)EEDDDEDSGHSSR 88.036 2.2291999999999998e-06 2996100.0 0.0 284.51 0.0 0.0 189.76 141.26 126.83 0.0 185.46 176.65 542.5600000000001 True False 0.0 298.9903437595361 0.0 0.0 161.846555373552 156.2080394392009 149.8733692858885 0.0 143.45360611876305 136.74464231124682 407.82737810577373 0.0 0.7331296519332505 0.0 0.0 0.39685063843746077 0.3830248968687112 0.3674921727472094 0.0 0.3517507990391882 0.33530030020638013 1.0 8.671814818811452 -10.360026077060182 0.6337829833491996 1.036504529363208 0.2416496256733629 0.09359637327301684 0.29496117699097674 0.4331292662320353 0.30298428057804705 0.17932881183223273 0.0473720531995546 4.3648962258666326e-11 10.360026077060182 -0.7948549036898451 SLDDS(ph)EEDDDEDSGHSSR ddPTM_A549_PD325901_60min_R1 2 SLDDSEEDDDEDSGHSSR 18 0 B4DFN3;Q13563-3;Q13563 B4DFN3 PKD2 Polycystin-2 1 S(0.004)LDDS(0.996)EEDDDEDSGHSSR;S(0.155)LDDS(0.845)EEDDDEDSGHSSR 114.02 1.2696e-15 3369700.0 0.0 0.0 127.52 0.0 0.0 161.92 0.0 0.0 171.4 0.0 124.26 True False 0.0 0.0 136.17427404005397 0.0 0.0 160.60137720440486 0.0 0.0 164.19665405955575 0.0 108.97680774903974 0.0 0.0 1.2495711413537336 0.0 0.0 1.4737206982081013 0.0 0.0 1.5067119091768642 0.0 1.0 6.7678773256432185 -8.765248383034338 24.999999991246714 1.2392806475289093 0.36310556619504186 0.009271357607163577 0.6378196896118916 74.86382250852373 491359.7232383068 0.08885058021443225 0.09634673840174948 1.7169261566219394e-09 8.765248383034338 -0.8761750813338675 SLDDVIK ddPTM_A549_MK2206_60min_R1 1 SLDDVIK 7 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 103.92 0.028369 23217000.0 1664.1 2064.8 1830.5 1566.6 2643.9 2180.6 1572.2 2017.0 2726.1 2144.7 2252.1 False True 1944.9593966611685 2169.8895005261343 2090.0924250222142 1950.4170703273458 2254.985812353152 2411.3496446348677 1857.848389113569 2302.915926803438 2108.6427026871565 1660.21078044116 1692.841415202029 1.1489318368484331 1.2818031748515395 1.234665223955887 1.1521558090511252 1.3320715054008971 1.4244391843089976 1.097473379626554 1.3603849162259543 1.245623295691584 0.9807243404681384 1.0 10.725231113053516 -10.48318870602772 0.754131728942301 0.9948333708384669 1.25667863331322 0.5352534215177465 0.09344965660815434 0.43271578106240277 0.43261674458230925 0.06532102863928416 0.017611779610472333 3.287087720384451e-11 10.48318870602772 0.26184526247475315 SLDDVIK ddPTM_A549_PD325901_60min_R1 4 SLDDVIK 7 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;;; 135.16 0.015447999999999998 80183900.0 14824.0 14890.600000000002 14676.7 15306.300000000001 17037.9 14954.6 15658.900000000001 15414.3 16083.800000000001 17027.7 17560.6 False True 16328.921567147985 16145.483120565248 15672.749120166724 16251.735387870533 15841.216681564098 14832.814695781837 16254.808008378875 15106.849694215582 15407.853818921129 15952.56811603454 15400.757525815114 1.0602674277402953 1.0483564262018805 1.0176609231004183 1.0552555847093228 1.028599837054163 0.9631224094606206 1.0554550957076094 0.9809160146111724 1.0004607755880917 1.03583009402586 1.0 13.910713694876012 -7.011443085218078 24.048986586186 1.0006973564307007 1.043405873145816 0.33433761341967194 0.025492383493630002 219.57734387171928 461470.29705143336 0.0030230270313835145 0.005448217134917451 9.739954201639994e-08 7.011443085218078 0.04270851671511533 SLDDVIKR ddPTM_A549_MK2206_60min_R1 3 SLDDVIKR 8 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;; 120.15 0.0012196 85229800.0 11577.1 12186.2 12080.7 10423.7 15987.9 11554.2 11035.900000000001 10945.3 17182.1 17045.5 16883.5 False True 13531.031447080117 12806.425528531368 13793.924916124477 12977.506967937676 13636.101089043064 12776.857774942762 13040.980178996591 12496.82979357544 13290.381784175548 13194.90971138611 12690.860989105033 1.0662027941757743 1.0091061228647564 1.086917974120622 1.0225868031395762 1.0744819520716136 1.0067762767168875 1.0275882928819513 0.9847109509988198 1.0472403563150836 1.0397174567362921 1.0 13.631502329152076 -7.276311743638871 24.815819625039396 1.0191635878497645 1.0498054368087366 0.2920871357495449 0.0263574174359986 815.0723211390077 1360016.0918979428 0.0039333874047945165 0.006300263097917557 5.292833792861775e-08 7.276311743638871 0.03064184895897215 SLDDVIKR ddPTM_A549_PD325901_60min_R1 4 SLDDVIKR 8 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ;;; 83.005 0.0034656999999999995 194113000.0 9259.0 8723.8 10175.3 9921.2 10744.8 11491.5 11106.8 11516.0 11283.9 10283.2 10847.199999999999 False True 10198.966863884452 9458.985242178765 10865.857047049576 10534.009991319992 9990.122315547684 11397.91703399468 11529.475351874167 11286.304345872775 10809.676923819256 9633.916997058112 9513.063166066177 1.0721012449770067 0.9943154036777228 1.1422038156762082 1.10732051363809 1.0501477958417447 1.1981332232347537 1.2119624510642049 1.1864006523295132 1.1362982390759475 1.012703987021029 1.0 13.21569424224977 -3.790235084171405 16.397242107059547 1.0916429558471314 0.3374301650887671 0.0 0.07734129265207723 0.0 0.0 0.01138148387827783 0.0 0.00016209324469888825 3.790235084171405 -0.7542127907583643 SLDEADSENKEEVS(ph)PLGSK ddPTM_A549_MK2206_60min_R1 2 SLDEADSENKEEVSPLGSK 19 1 Q6ZV73-2;Q6ZV73;F8VQX5 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 SLDEADSENKEEVS(0.997)PLGS(0.003)K;SLDEADSENKEEVS(0.994)PLGS(0.006)K 149.07 1.7213e-21 27426000.0 7458.200000000001 7799.8 7188.8 6307.9 8970.8 6946.8 6402.4 6411.200000000001 10462.2 9302.1 10623.0 True False 8716.96182451675 8196.77650436059 8208.27993717547 7853.33578317239 7651.2072035469 7681.905765087359 7565.633205992055 7320.007233476544 8092.528404700328 7200.749149410976 7985.015920115072 1.091664927374513 1.026519744777474 1.027960372188861 0.9835090952529015 0.9581956103897961 0.9620401314086116 0.9474787879800529 0.9167179260139854 1.0134642793027402 0.901782691662712 1.0 12.963079568672818 -5.311988050998122 1.2157355078267462 0.9885962790678033 1.1287442838206487 0.4179214442597733 0.03999072144818862 1.0443733728712519 1.3522705593096886 0.0053156614425487305 0.17915173988127867 4.875419039486627e-06 5.311988050998122 0.1401480047528454 SLDEADSENKEEVS(ph)PLGSK ddPTM_A549_PD325901_60min_R1 2 SLDEADSENKEEVSPLGSK 19 1 Q6ZV73-2;Q6ZV73;F8VQX5 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 SLDEADSENKEEVS(0.997)PLGS(0.003)K;SLDEADSENKEEVS(1)PLGSK 202.44 2.5544000000000002e-55 41160000.0 10107.3 9446.099999999999 10053.5 10571.5 11531.7 10840.900000000001 10580.4 11395.8 11914.3 13996.0 13483.699999999999 True False 11133.385655399008 10242.155998090837 10735.790966606673 11224.477545381531 10721.753174205316 10752.615304688943 10983.042911817036 11168.501829167846 11413.58340409431 13112.290171427701 11825.290380216698 0.9414894093446345 0.8661230015311598 0.9078670054958887 0.949192551259434 0.906679906325382 0.9092897475632139 0.9287757474599767 0.9444589917091899 0.9651841973528904 1.1088345190545266 1.0 13.529587990171622 -8.821296249207412 0.5327151211665139 0.9968947635229989 0.9070340120232608 0.5688936951102259 0.03999416745373771 0.2716802293637413 0.17825149576082933 0.007617042825087404 0.0070583748393405615 1.5090504208351452e-09 8.821296249207412 -0.08986075149973805 SLDGAAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAK ddPTM_A549_MK2206_60min_R1 2 SLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK 39 2 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0 P11171 EPB41 Protein 4.1 1 SLDGAAAVDS(0.003)ADRS(0.996)PRPTSAPAITQGQVAEGGVLDASAK;SLDGAAAVDS(0.108)ADRS(0.892)PRPTSAPAITQGQVAEGGVLDASAK 254.57 6.408299999999998e-162 115321000.0 3676.1000000000004 3698.2 3711.9 2807.7 4915.5 4000.0 3740.3 3984.0 5947.299999999999 5218.7 5627.1 True False 4296.535807983967 3886.4225837106487 4238.3032354219895 3495.586626042444 4192.436461523478 4423.2773450148925 4419.864094772601 4548.744200488298 4600.24604588655 4039.7920454554423 4229.735769940652 1.0157929576873432 0.9188334201228792 1.0020255320774938 0.826431440678738 0.9911816457467041 1.0457573677414265 1.044950402382846 1.075420415812906 1.0875965535670085 0.9550932410872855 1.0 12.046351826186308 -7.000500447347508 24.99998862925965 1.0446486505236785 0.9392326299680916 0.3662698034831252 0.05700963712713876 12.69225941240789 634117.0286662913 0.007604195301904113 0.014260547333172252 9.988483410665446e-08 7.000500447347508 -0.10541602055558685 SLDGAAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAK ddPTM_A549_PD325901_60min_R1 2 SLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK 39 2 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0 P11171 EPB41 Protein 4.1 1 SLDGAAAVDS(0.056)ADRS(0.944)PRPTSAPAITQGQVAEGGVLDASAK;SLDGAAAVDS(0.032)ADRS(0.968)PRPTSAPAITQGQVAEGGVLDASAK 269.62 1.6547999999999992e-181 177245000.0 5284.6 5314.6 4935.799999999999 5838.4 6409.799999999999 5933.1 6268.1 6232.1 6002.9 5597.8 5142.4 True False 5821.0887016831 5762.479993590322 5270.773069376557 6199.024708031549 5959.597760609552 5884.782800713035 6506.6359755359335 6107.795876512129 5750.6189886470665 5244.3539526734785 4509.91740035942 1.2907306686413338 1.2777351516750792 1.1687072293067942 1.3745317613882497 1.3214427741258852 1.304853787398422 1.4427395000665388 1.3543032686198124 1.2751051689303152 1.1628492247453417 1.0 12.138885295264005 -10.291930390492347 0.7551140803057493 1.0038990674984163 1.3147527305064608 0.5316625438202988 0.07908238454299805 0.25591662598329 0.27364067226366956 0.0432331925711744 0.014351646678590003 5.105868312010453e-11 10.291930390492347 0.3108536630080445 SLDGAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAK ddPTM_A549_MK2206_60min_R1 1 SLDGAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK 38 2 A0A1B0GWG0;A0A2R8Y6D0 A0A1B0GWG0 1 S(0.014)LDGAAVDS(0.325)ADRS(0.655)PRPT(0.003)S(0.003)APAITQGQVAEGGVLDASAK 113.21 5.0234e-16 5902100.0 1275.9 1328.0 1172.5 1259.1 1437.7 1035.2 1369.5 1223.5 1567.3 1704.9 1687.9 True False 1491.2407272399396 1395.5895276533838 1338.778130750367 1567.579556523146 1226.216234509673 1144.7441768898548 1618.3204229048667 1396.934871811603 1212.3090524638046 1319.7619058955256 1268.7478463298717 1.1753641446987886 1.0999739086773066 1.0551963769815043 1.2355327822291167 0.9664774904302454 0.9022629517766478 1.2755256512050126 1.1010342802571371 0.9555161460732103 1.0402081940183963 1.0 10.309189658020511 -7.750137212522087 0.37780558453963936 0.9734621892947372 1.1409508971701652 0.07518701531541472 0.10866385196818971 1.7055332299864352 0.5297754197411341 0.0470651821901163 0.10522561495396945 1.7777176629488834e-08 7.750137212522087 0.16748870787542802 SLDGAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAK ddPTM_A549_PD325901_60min_R1 1 SLDGAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK 38 2 A0A1B0GWG0;A0A2R8Y6D0 A0A1B0GWG0 1 S(0.009)LDGAAVDS(0.029)ADRS(0.961)PRPT(0.001)S(0.001)APAITQGQVAEGGVLDASAK 144.39 3.1255000000000004e-40 13851000.0 1389.7 1544.5 1577.7 1437.3 1849.1 2048.1 1600.8 2185.6 1660.0 1729.1 1701.9 True False 1530.7813209569317 1674.6604354232206 1684.7722094808116 1526.078756654863 1719.2255950486951 2031.4209526453906 1661.7193199913722 2142.006493429969 1590.2359728054992 1619.9243309099477 1492.5770892329851 1.0255961531230384 1.1219925908710053 1.12876729894507 1.0224455190043777 1.1518504521144577 1.3610157674933292 1.113322274593741 1.4351061053273413 1.0654297083058535 1.085320378153737 1.0 10.543589730980987 -8.981510241007133 24.959980529223245 1.0288658759778955 1.171256804850377 0.1625561667472235 0.120970480379128 128.32109010823703 173227.78529803778 0.02124568976488556 0.021570659057999042 1.043493526036422e-09 8.981510241007133 0.14239092887248161 SLDGAEFSRPAS(ph)VSENHDAGPDGDKRDEDGESGGQR ddPTM_A549_MK2206_60min_R1 1 SLDGAEFSRPASVSENHDAGPDGDKRDEDGESGGQR 36 3 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 S(0.004)LDGAEFS(0.17)RPAS(0.621)VS(0.205)ENHDAGPDGDKRDEDGESGGQR 85.08200000000001 4.979999999999999e-07 7501000.0 822.61 1214.5 781.66 786.13 1322.8 739.82 885.65 977.51 1526.1 1244.8 1268.8 True False 961.4464571164259 1276.3128624510791 892.5111417333321 978.7318852907167 1128.2178723025636 818.1072613472293 1046.5611409607118 1116.075035998823 1180.4407866809252 963.5988154488532 953.7219429014403 1.0080993357366674 1.3382442041421878 0.9358190281520723 1.026223515748406 1.1829631064902069 0.857804800902829 1.0973440935801826 1.1702310556087947 1.237720066594834 1.0103561343229297 1.0 9.897424900377361 -7.992540671398935 24.990715656383887 1.1204102375021319 1.0619108879553607 0.0223113795076324 0.13334702016501707 579.1484731069663 1940288.454824467 0.02191159414228899 0.030240390102210628 1.0173240899726139e-08 7.992540671398935 -0.05849934954677116 SLDNKGDT(ph)DGEDQVCVSEISIVTNR ddPTM_A549_MK2206_60min_R1 2 SLDNKGDTDGEDQVCVSEISIVTNR 25 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9 Q6ULP2-7 AFTPH Aftiphilin 1 S(0.002)LDNKGDT(0.998)DGEDQVCVSEISIVTNR;S(0.006)LDNKGDT(0.994)DGEDQVCVSEISIVTNR 109.62 4.3856999999999997e-13 4539900.0 1396.4 2095.3 1540.5 2006.1 2133.4 1887.9 1895.8 1421.8 3073.7 2614.1 2304.5 True False 1632.0781812977918 2201.9418202501015 1758.9660643248947 2497.59459005725 1819.579686097892 2087.6763249134046 2240.2423203673225 1623.3445040798833 2377.511857690295 2023.5729944287018 1732.2290490355997 0.9421838192855814 1.2711608903430003 1.0154350345897851 1.441838532524183 1.050426724520596 1.2051964641025368 1.2932714190508199 0.9371419472405588 1.3725158685070833 1.168190197223228 1.0 10.758413991897394 -5.24551929241366 23.394629782248806 1.1764376347394696 0.9421833881340396 0.15856956647124798 0.15450663276821267 1891.841532829057 2779955.837250455 0.022419317914402468 0.7180012063417788 5.681731513706008e-06 5.24551929241366 -0.23425424660543004 SLDNNYST(ph)PNER ddPTM_A549_MK2206_60min_R1 2 SLDNNYSTPNER 12 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95 O60716-3 CTNND1 Catenin delta-1 1 SLDNNYS(0.009)T(0.991)PNER;SLDNNYS(0.004)T(0.996)PNER 139.74 6.1860999999999996e-09 65571000.0 26763.0 30380.0 29654.0 28653.0 43340.0 34915.0 31549.0 32557.0 43480.0 45426.0 46356.0 True False 31279.940107471193 31926.212236528452 33859.383103856155 35672.98628628206 36964.74341215083 38609.682125298736 37281.04492312937 37172.054451630895 33631.849423292464 35164.23505027282 34844.525839485475 0.8977002657911066 0.9162475731080255 0.9717274747784639 1.0237759139158031 1.0608479387101528 1.1080558909929725 1.069925448113943 1.066797540103355 0.9651975055772227 1.0091753066826084 1.0 15.088644402513832 -5.864336169196976 2.5357561305767455 1.0117862816154832 0.9014178836285772 0.5317014903800887 0.0433503690879306 0.24142145697519019 3.0457039501290226 0.007816175474292236 0.033696718248971115 1.3666705335507246e-06 5.864336169196976 -0.11036839798690601 SLDNNYST(ph)PNER ddPTM_A549_PD325901_60min_R1 2 SLDNNYSTPNER 12 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95 O60716-3 CTNND1 Catenin delta-1 1 SLDNNYS(0.011)T(0.989)PNER;SLDNNYS(0.004)T(0.996)PNER 179.68 1.4368e-16 90666000.0 24176.0 25886.0 28753.0 25815.0 31872.0 29410.0 25931.0 28577.0 27619.0 27944.0 32774.0 True False 26630.32972256944 28067.504066924892 30704.351485834944 27409.533919881218 29633.42067243093 29170.494710854422 26917.818394987662 28007.009316777185 26458.269477659687 26179.61107104711 28743.005771503504 0.926497734240842 0.9764985711672396 1.0682373211042515 0.9536070840251397 1.0309784894456029 1.0148727987166444 0.9364997735092349 0.9743938939240654 0.9205115737718371 0.9108167489220003 1.0 14.81092331764589 -7.754901154124176 24.989020833953393 0.9608246185742256 0.9973362474643896 0.20244633691274583 0.04292414299848561 245.8773408500614 939736.3619482734 0.006773462447891489 0.009918669815858904 1.7583237647374198e-08 7.754901154124176 0.036511628890164016 SLDQEIAR ddPTM_A549_MK2206_60min_R1 2 SLDQEIAR 8 0 P48681 P48681 NES Nestin 0 ; 93.262 0.007103399999999999 13352300.0 3975.6000000000004 4347.0 3849.4 3600.0 4341.0 4297.4 3828.1 3907.7 5631.1 4886.0 5015.5 False True 4646.58408591199 4568.243732461791 4395.302802993994 4482.000161610142 3702.4446504879284 4752.14801561675 4523.6162182709895 4461.6284418293435 4355.664841018908 3782.249206525626 3770.0129292419424 1.2325114457488888 1.2117315824114039 1.1658588141441155 1.1888553821250059 0.9820774411063888 1.2605123920814487 1.199894086087545 1.1834517614576108 1.155344801932742 1.0032456857611212 1.0 11.880353755880495 -10.424285455940902 0.6086746839242664 0.9873025447031143 1.1777409704453425 0.4933198610911981 0.06789015949848479 0.6320712009974019 0.39097925995543154 0.062459253038772554 0.014835118575991336 3.764562779818715e-11 10.424285455940902 0.19043842574222825 SLDQEIAR ddPTM_A549_PD325901_60min_R1 2 SLDQEIAR 8 0 P48681 P48681 NES Nestin 0 ; 84.244 0.0088641 15224500.0 5120.4 4792.4 5379.9 5421.2 5980.4 4828.6 5290.8 5525.4 4791.6 5405.6 5894.4 False True 5640.219238560749 5196.272366929262 5745.012365966804 5756.055211561495 5560.357335259974 4789.277482517229 5492.144289236847 5415.1915624075555 4590.225715237848 5064.289493474535 5169.4261676801825 1.0910725979266356 1.0051932648573114 1.1113443116540187 1.1134804956784141 1.0756237065583674 0.926462111493209 1.06242822918612 1.0475421036601558 0.8879565287026325 0.979661828838378 1.0 12.335788427680248 -7.769077253261133 0.8975227620710478 0.9519554256381538 1.0767465335250304 0.3245915306913978 0.05844138728023341 0.4224128695882368 0.6856633957040656 0.012610505272132493 0.022092940757599894 1.7018557516103335e-08 7.769077253261133 0.12479110788687653 SLDS(ph)DES(ph)EDEEDDYQQK ddPTM_A549_PD325901_60min_R1 2 SLDSDESEDEEDDYQQK 17 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 S(0.117)LDS(0.893)DES(0.99)EDEEDDYQQK;S(0.024)LDS(0.976)DES(1)EDEEDDYQQK 114.3 5.9387e-10 33009000.0 1954.67 1970.98 2212.17 2251.65 2443.18 2151.69 2419.73 1899.77 2083.54 2040.65 2545.24 True False 2153.1066594480008 2137.081401754911 2362.301159058863 2390.7293066318234 2271.5794653134353 2134.167350030547 2511.8141492770637 1861.8775970092656 1995.9760595055243 1911.8030107404918 2232.1916156057123 0.9645707135512864 0.9573915549248254 1.0582878022404205 1.0710233341608046 1.0176453712272524 0.9560860882686515 1.1252681587532416 0.8341029434894814 0.8941777424264313 0.8564690402807189 1.0 11.124245160851851 -8.261339060718736 24.999999996802945 0.9399377067825132 1.0196635823901956 0.39173338517061407 0.0674945520855139 10.234683791535847 2550638.667177197 0.011192143897874672 0.01398899382531465 5.478490832848449e-09 8.261339060718736 0.0797258756076824 SLDS(ph)DES(ph)EDEEDDYQQKR ddPTM_A549_MK2206_60min_R1 2 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 S(0.028)LDS(0.972)DES(1)EDEEDDYQQKR;S(0.122)LDS(0.879)DES(0.999)EDEEDDYQQKR 76.027 0.00011514 46111000.0 2744.4 3434.8 3481.2 2744.7 4632.5 3071.0 2671.8 2617.6000000000004 5255.1 4957.6 5003.3 True False 3207.5876258619724 3609.6166487830146 3974.886506412092 3417.1516232142644 3951.0653866356415 3395.9711816351837 3157.2314756606224 2988.652816063798 4064.828240670289 3837.674716797265 3760.8425259448118 0.8528907030097335 0.9597893620595546 1.0569138375219544 0.9086133225840919 1.0505798526204022 0.902981488378601 0.8395011101581425 0.794676404408339 1.0808291526774598 1.020429515546693 1.0 11.87684018375639 -8.800579551001771 24.999872040303483 1.0381693341615523 0.92720697054485 0.28651510540994307 0.07886126279501962 152.8773143392654 97646.15747185003 0.014507598935947887 0.015444633376584162 1.582779617738781e-09 8.800579551001771 -0.11096236361670231 SLDS(ph)DES(ph)EDEEDDYQQKR ddPTM_A549_PD325901_60min_R1 4 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 S(0.06)LDS(0.942)DES(0.997)EDEEDDY(0.001)QQKR;S(0.002)LDS(0.998)DES(1)EDEEDDYQQKR;S(0.003)LDS(0.997)DES(1)EDEEDDYQQKR;S(0.121)LDS(0.88)DES(1)EDEEDDYQQKR 86.546 4.507e-06 186312600.0 17709.11 18978.13 19661.03 18598.440000000002 20642.22 20759.07 21410.1 21983.06 22841.41 21540.47 23057.17 True False 19506.925810442266 20577.48361885302 20995.34572717788 19747.22339867813 19192.381678993057 20590.015016567715 22224.87307155625 21544.59062292304 21881.464970842917 20180.401048080388 20221.28426144316 0.964672943529952 1.0176150709719778 1.03827954029659 0.9765563424836994 0.9491178419161063 1.0182347842183115 1.0990831632753129 1.0654412620074327 1.082100656315153 0.9979782088598237 1.0 14.303587005810064 -7.524326436034756 24.99537792073885 1.04682922490179 0.9919264375008826 0.3785475488686979 0.03633235295881802 47.80759435435969 825432.7476540982 0.006361671142484513 0.009475527602842685 2.990016355688958e-08 7.524326436034756 -0.05490278740090748 SLDS(ph)DESEDEEDDYQQK ddPTM_A549_MK2206_60min_R1 2 SLDSDESEDEEDDYQQK 17 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 S(0.001)LDS(0.991)DES(0.007)EDEEDDYQQK;SLDS(1)DESEDEEDDYQQK 389.74 1.1523999999999991e-302 27318000.0 3987.9 6712.7 5417.6 3847.0 5924.9 4084.7 5166.4 4936.3 6128.4 6186.6 6785.3 True False 4660.960025205862 7054.347757740111 6185.897143840673 4789.515172698393 5053.355058667571 4516.940242795585 6105.068005035199 5636.035641784734 4740.327185043823 4789.042763219693 5100.322745246805 0.9138558985408515 1.383117914315195 1.2128442557102015 0.9390611951296481 0.9907912324522982 0.8856185124765098 1.1969964078694346 1.1050350974430356 0.929417101978796 0.9389685716816242 1.0 12.316372827478487 -6.2569599454642955 24.932171518827946 0.986793863909518 1.1912572250206772 0.24511305763994917 0.1316602785873023 317.74124667389526 1768514.6704027585 0.017287284032163508 0.04408856131442332 5.534011464836542e-07 6.2569599454642955 0.20446336111115926 SLDS(ph)DESEDEEDDYQQK ddPTM_A549_PD325901_60min_R1 3 SLDSDESEDEEDDYQQK 17 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 S(0.104)LDS(0.895)DES(0.001)EDEEDDYQQK;SLDS(0.998)DES(0.002)EDEEDDYQQK;SLDS(0.745)DES(0.255)EDEEDDYQQK 446.46 0.0 43164000.0 11781.310000000001 14091.74 9775.5 11985.42 15137.11 15529.89 13246.22 12937.279999999999 10988.15 13510.43 12645.82 True False 12977.339918257978 15279.300384765827 10438.924214856872 12725.732172536233 14073.931613794586 15403.419724758616 13750.31215070971 12679.235801300169 10526.356267820927 12657.37914409559 11090.464308457755 1.1701349517315758 1.3776970882196162 0.9412522257427934 1.147448097626661 1.2690119387572976 1.388888625069713 1.2398319644943552 1.1432556337276873 0.9491357597890081 1.1412848724866174 1.0 13.43703214554387 -8.620999155249589 3.802655894326848 0.97603688591131 1.2190285094258098 0.27870805103531293 0.12461924693009874 0.14668275165875397 4.078116352421935 0.01997793721211695 0.022701005121492084 2.393320411671619e-09 8.620999155249589 0.24299162351449977 SLDS(ph)DESEDEEDDYQQKR ddPTM_A549_MK2206_60min_R1 1 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 S(0.027)LDS(0.943)DES(0.03)EDEEDDYQQKR 71.535 0.00040089999999999993 3855100.0 359.6 567.01 571.38 415.57 795.97 529.1 539.79 487.88 569.06 877.11 688.78 True False 420.291688624095 595.8683871044766 652.4102757766689 517.3846686556465 678.8838674150833 585.0890108118448 637.8628558450665 557.0384840698368 440.1688186020881 678.9702418206488 517.7369166390715 0.811786208625899 1.1509095989766414 1.2601192899510425 0.9993196390442627 1.3112525794415228 1.1300894180194732 1.2320211971473884 1.0759103053456076 0.8501785452338948 1.3114194101286722 1.0 9.016075381362144 -8.59664375660265 5.791742639708472 0.9297807045059548 1.1373213634847488 0.0 0.17494414895008822 0.1697445226823315 9.993526756798515 0.022042841219849642 0.025038225317012008 2.531373582033838e-09 8.59664375660265 0.20754065897879392 SLDS(ph)DESEDEEDDYQQKR ddPTM_A549_PD325901_60min_R1 2 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 S(0.001)LDS(0.973)DES(0.026)EDEEDDYQQKR;SLDS(1)DESEDEEDDYQQKR 153.21 3.3354e-18 10387900.0 1649.38 2538.1000000000004 2263.01 2047.6 2520.1 3477.5 2986.8999999999996 2639.3 2405.1000000000004 2604.7 3086.4 True False 1816.82384339062 2751.9945944627257 2416.5914671846185 2174.0756015629963 2343.096869873028 3449.180392961449 3100.568113994395 2586.657091009203 2304.0220109605457 2440.238797479116 2706.7923663015954 0.6712091647698205 1.0166995550615108 0.8927878980560705 0.8031926011870381 0.8656359826647879 1.2742685534000562 1.145476894569062 0.9556171072491467 0.8512001288479427 0.9015241907207375 1.0 11.402368509638016 -5.253451515950571 24.023295364146826 0.9549940178252218 0.6712089220383746 0.29104320143756124 0.13231635330535105 630.2090215486187 1895258.7370169887 0.01925735911985033 0.2847162771661756 5.578898807376213e-06 5.253451515950571 -0.2837850957868472 SLDS(ph)PT(ph)SSPGAGTR ddPTM_A549_MK2206_60min_R1 2 SLDSPTSSPGAGTR 14 0 K7EJC2;Q9P107 K7EJC2 GMIP GEM-interacting protein 2 S(0.033)LDS(0.944)PT(0.433)S(0.376)S(0.214)PGAGTR;S(0.016)LDS(0.953)PT(0.719)S(0.182)S(0.115)PGAGT(0.014)R 65.038 0.007427800000000001 6014500.0 2068.9 1924.3500000000001 1869.77 1551.69 2541.3 1827.99 1673.2 1561.19 2361.7 3156.6000000000004 2824.7 True False 2418.0797402513604 2022.2911954365877 2134.931501520779 1931.8541196580122 2167.478136439753 2021.426688478443 1977.1987817483923 1782.4934634438564 1826.77872085993 2443.5218676460872 2123.2490322459794 1.1388582797061295 0.9524512502885268 1.005502166301445 0.9098575298133968 1.020830860404061 0.9520440879891379 0.9312137915621256 0.8395121986978274 0.8603695059394695 1.1508409190519315 1.0 11.052057877062206 -7.498802106563206 3.225551247057864 0.9237455157168936 0.9972770018656953 0.010364216978901664 0.09484979494196194 0.35105540307149036 7.486753761406761 0.011629957235667728 0.018555389654815773 3.1710120577864805e-08 7.498802106563206 0.07353148614880178 SLDS(ph)PT(ph)SSPGAGTR ddPTM_A549_PD325901_60min_R1 2 SLDSPTSSPGAGTR 14 0 K7EJC2;Q9P107 K7EJC2 GMIP GEM-interacting protein 2 S(0.022)LDS(0.858)PT(0.891)S(0.12)S(0.105)PGAGT(0.004)R;S(0.012)LDS(0.974)PT(0.724)S(0.138)S(0.147)PGAGT(0.005)R 67.102 0.0059612 9136300.0 2352.8 1969.6 2048.88 2043.2799999999997 2692.0 2399.6000000000004 2530.8999999999996 1903.05 2135.65 2658.4 2026.96 True False 2591.6545239601833 2135.5851043117996 2187.9293177163268 2169.4887649744296 2502.9232068958336 2380.0584531848453 2627.21478446162 1865.0921748361563 2045.8960574229293 2490.5481703146165 1777.6567699581012 1.4579049047928796 1.2013483932346145 1.2307940175469843 1.2204205005365372 1.407990141401046 1.3388740129181083 1.477908912935731 1.0491857631662584 1.1508948701447863 1.401028709481031 1.0 10.795761080100533 -8.281820575337395 24.876934073097058 1.0715916135644168 1.3232749904620034 0.2274706564147677 0.13614829099930464 398.4434889173132 486331.8264198395 0.01661079819504469 0.020094051364827916 5.2261205663851976e-09 8.281820575337395 0.2516833768975866 SLDS(ph)PTSSPGAGTR ddPTM_A549_MK2206_60min_R1 2 SLDSPTSSPGAGTR 14 0 K7EJC2;Q9P107 K7EJC2 GMIP GEM-interacting protein 1 SLDS(0.969)PT(0.025)S(0.005)SPGAGTR;SLDS(0.916)PT(0.058)S(0.013)S(0.013)PGAGTR 129.17 1.0909e-08 17731800.0 5177.299999999999 6168.5 4882.2 3883.1 5507.1 4874.1 4066.5 4635.3 6506.7 6856.1 6836.0 True False 6051.101667167758 6482.450302206244 5574.569373091205 4834.459674318983 4697.012885211256 5389.874026834271 4805.330412371407 5292.367970010891 5032.942839064785 5307.302248231753 5138.432535997991 1.177616252578182 1.261561820028297 1.0848774084388182 0.9408432708711295 0.9140944932731315 1.0489335004546176 0.9351743705316764 1.0299576637300354 0.9794704520893904 1.0328640516442946 1.0 12.327112621236886 -5.966393542280624 3.9775458770801784 0.9854757163894994 1.2172515652928737 0.8024793921372981 0.04486572637820207 0.055613788862683824 1.929164476269956 0.0054467477626815326 0.017887641221550964 1.080454438013268e-06 5.966393542280624 0.23177584890337433 SLDS(ph)PTSSPGAGTR ddPTM_A549_PD325901_60min_R1 2 SLDSPTSSPGAGTR 14 0 K7EJC2;Q9P107 K7EJC2 GMIP GEM-interacting protein 1 SLDS(0.752)PT(0.195)S(0.051)S(0.002)PGAGTR;S(0.002)LDS(0.618)PT(0.198)S(0.163)S(0.014)PGAGT(0.005)R 95.854 3.8113e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SLDSDES(ph)EDEEDDYQQK ddPTM_A549_MK2206_60min_R1 2 SLDSDESEDEEDDYQQK 17 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 SLDSDES(1)EDEEDDYQQK;SLDS(0.001)DES(0.999)EDEEDDYQQK 291.46 1.2160999999999996e-132 18637000.0 3051.6 3508.4 2464.3 3059.5 3517.1000000000004 2916.0 3058.0 2762.2 4680.2 4069.8 4211.0 True False 3566.6354755430675 3686.962574411995 2813.774795401389 3809.077637346172 2999.7392490741986 3224.569184515855 3613.5990166068523 3153.750308882724 3620.1421727436364 3150.4293534011426 3165.292482312394 1.1267949156273462 1.164809443365719 0.8889462225449053 1.2033888364602134 0.9476973347128885 1.0187270852645367 1.1416319461154343 0.9963535207270204 1.143699102996938 0.9953043426494372 1.0 11.628123099729839 SLDSDES(ph)EDEEDDYQQK ddPTM_A549_PD325901_60min_R1 3 SLDSDESEDEEDDYQQK 17 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 SLDSDES(1)EDEEDDYQQK;SLDSDES(1)EDEEDDYQQK;S(0.007)LDS(0.035)DES(0.959)EDEEDDYQQK 267.34 6.2566e-100 25535900.0 3743.48 4177.91 3764.66 4539.5199999999995 4835.17 4269.23 3994.2200000000003 4140.8099999999995 3351.19 3827.38 4591.400000000001 True False 4123.51533379568 4529.99713807642 4020.152466339633 4819.915840402061 4495.564339630954 4234.462806338694 4146.22222782105 4058.218296147397 3210.3511383771456 3585.7185736152446 4026.6869072826426 1.0240466737897884 1.1249936343159668 0.9983772165322337 1.1969929501309846 1.1164424856326185 1.0515997155577874 1.029685774754977 1.0078306035683398 0.7972686261181428 0.8904885470807613 1.0 11.975377585386045 -8.333728219405492 2.282833928692878 0.9050496809988432 1.085692429336359 0.5579693341118649 0.06947921227234319 0.20111754444527655 2.0515748820454807 0.014992263254427022 0.018741086577238292 4.6373703463368325e-09 8.333728219405492 0.1806427483375158 SLDSDES(ph)EDEEDDYQQKR ddPTM_A549_MK2206_60min_R1 3 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 S(0.01)LDS(0.457)DES(0.534)EDEEDDYQQKR;SLDSDES(1)EDEEDDYQQKR;SLDSDES(1)EDEEDDYQQKR 189.47 2.1958e-40 26606500.0 6006.8 8978.400000000001 7978.290000000001 5607.1900000000005 10080.4 6375.69 5441.07 5613.63 10760.3 11872.5 11638.099999999999 True False 7020.600987839859 9435.36221015297 9109.73149064763 6980.951801716329 8597.586513425133 7050.361283959499 6429.641988649134 6409.3792435208625 8323.10923066821 9190.494004190647 8748.038574780303 0.802534297011393 1.0785688848417005 1.0413456013911564 0.7980019454694331 0.9828016234646121 0.8059362362992964 0.7349809827296752 0.7326647212094428 0.9514257578450647 1.0505776724265823 1.0 13.09474386667607 -8.980448705058153 22.471345692400902 0.9785705313631663 0.8767571397374962 0.19813746647816066 0.11373699340632326 63.81315795827008 73346.45035388935 0.020875888711081706 0.021296875435121463 1.046047232818876e-09 8.980448705058153 -0.10181339162567005 SLDSDES(ph)EDEEDDYQQKR ddPTM_A549_PD325901_60min_R1 1 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 SLDSDES(1)EDEEDDYQQKR 176.73 4.8431000000000005e-31 17239000.0 3670.7 4598.2 3299.5 4720.6 5045.4 5118.9 4801.7 4862.5 4374.3 4675.4 4995.5 True False 4043.34676177348 4985.706451384303 3523.423911505317 5012.180740739544 4691.02850968508 5077.213375565887 4984.431321091062 4765.5136229425425 4190.463383038008 4380.194446091242 4381.085169083596 0.9229098740893088 1.1380071966113312 0.8042354292423677 1.144050057759538 1.070745792113034 1.1588940136098522 1.1377161430837168 1.0877473135130487 0.9564898241671341 0.9997966889576492 1.0 12.09707254584662 -8.762807646196867 24.998731247642453 0.9794535258706885 1.0615522049942885 0.08909781383461335 0.1024674234781678 56.94568461681467 1040416.8519956265 0.01691725507725519 0.0184977491135723 1.7266024538801578e-09 8.762807646196867 0.08209867912360003 SLDSEPSVPSAAKPPS(ph)PEK ddPTM_A549_MK2206_60min_R1 4 SLDSEPSVPSAAKPPSPEK 19 1 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 SLDSEPSVPSAAKPPS(1)PEK;SLDSEPS(0.001)VPS(0.006)AAKPPS(0.993)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK 191.5 1.6179999999999998e-44 520700000.0 35850.8 36355.0 35618.1 31907.800000000003 48712.0 39124.9 36369.5 36946.6 52445.9 51231.7 51383.9 True False 41901.53857209313 38205.31421524 40669.28216535573 39725.21243239555 41546.52932839622 43265.07094899329 42977.367375566675 42183.893694217106 40566.987388892696 39658.42338803906 38623.85950650485 1.0848615106689756 0.9891635559829447 1.0529574901365413 1.0285148335759977 1.0756700614395913 1.1201643621789477 1.112715506028822 1.0921718914991572 1.0503090034816587 1.0267856163198805 1.0 15.237204712991005 -9.918136042284235 0.9946806750303201 1.0068680104294505 1.0669721415983184 0.24386519154465358 0.036223335440251275 0.4498670461342967 0.9063349936205679 0.013588837454066936 0.007583926049605586 1.207435547960529e-10 9.918136042284235 0.060104131168867925 SLDSEPSVPSAAKPPS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 SLDSEPSVPSAAKPPSPEK 19 1 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK 129.29 5.2433e-17 880250000.0 25043.9 23042.8 24958.9 24690.4 28095.4 24589.5 23794.0 25296.5 27220.1 29964.0 31331.5 True False 27586.338291655255 24984.69762471363 26652.76104405822 26215.46993203314 26122.076027868225 24389.251264622744 24699.493690576404 24791.941462779658 26076.133857447574 28072.067926311767 27477.924126742626 1.0039455005557394 0.9092643792693754 0.9699699628371372 0.9540556925302514 0.9506568220866861 0.887594388576324 0.8988849949744878 0.9022494329784956 0.9489848555214995 1.0216225868019957 1.0 14.745985396617506 -9.994902469829201 0.9706969513049448 0.9939040241473893 0.934384903183576 0.39224075411052894 0.03438769523733503 0.41074055246449376 0.7833497391903655 0.012577339614985597 0.0065588415070897636 1.0118066517029936e-10 9.994902469829201 -0.05951912096381329 SLDSESIS(ph)PGDFHR ddPTM_A549_MK2206_60min_R1 1 SLDSESISPGDFHR 14 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 SLDSES(0.004)IS(0.996)PGDFHR 100.41 7.6583e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SLDSESIS(ph)PGDFHR ddPTM_A549_PD325901_60min_R1 1 SLDSESISPGDFHR 14 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 SLDSES(0.011)IS(0.989)PGDFHR 83.37 4.4666000000000006e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SLEAASEK ddPTM_A549_PD325901_60min_R1 1 SLEAASEK 8 0 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YGX3;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;K7EPB9 P67936 TPM4 Tropomyosin alpha-4 chain 0 99.13600000000001 0.0066956 7784200.0 5984.6 6134.1 6872.9 6553.7 6952.3 6885.3 5723.8 6398.2 7023.3 6536.0 7560.7 False True 6592.152186370336 6651.042134625826 7339.3363241051375 6958.507164467387 6463.994432132949 6829.228399613943 5941.622341183541 6270.5828817092 6728.13512518365 6123.315844559261 6630.781831226171 0.9941741945612028 1.0030554923861685 1.1068583631483981 1.0494248403254451 0.9748464957318044 1.0299280798914592 0.8960666317209852 0.9456777558536619 1.0146820233926286 0.9234681520847039 1.0 12.694963272274855 -6.753729433549528 24.938546481385483 0.9937597262558284 1.0407466158631438 0.22733373382236088 0.04952038538713859 231.9126161199852 750137.8752980724 0.00671692901477205 0.013778705300513968 1.7630741035084777e-07 6.753729433549528 0.04698688960731534 SLEDDIR ddPTM_A549_MK2206_60min_R1 2 SLEDDIR 7 0 Q6P452;P09525;P09525-2;B4E1S2 Q6P452 ANXA4 Annexin;Annexin A4 0 ; 104.45 0.027953 8777300.0 2440.9 2432.8 2147.02 1899.03 2639.5 2157.31 2168.23 2203.5 3288.3 3587.3999999999996 3517.2 False True 2852.8642457245624 2556.619128671049 2451.499720497783 2364.292435250696 2251.233046524506 2385.595112293518 2562.169324976283 2515.8528729357336 2543.5053003360754 2777.003848442494 2643.782170218274 1.0790844562995998 0.9670309292009376 0.9272699347599368 0.8942841289588911 0.8515198687260385 0.9023417810918061 0.969130268688039 0.9516112565083308 0.9620706762411066 1.050390565351767 1.0 11.36838759808408 -9.37963927859194 0.778626006271668 0.993324197331453 0.936439394757304 0.19247561274092406 0.05724498313573726 0.8215190769075396 1.0760689344549776 0.018673879305186297 0.013145059655940879 4.172157755709162e-10 9.37963927859194 -0.056884802574149074 SLEDDIRS(ph)DTSFMFQR ddPTM_A549_PD325901_60min_R1 1 SLEDDIRSDTSFMFQR 16 1 Q6P452;P09525;P09525-2;B4E1S2 Q6P452 ANXA4 Annexin;Annexin A4 1 S(0.001)LEDDIRS(0.929)DT(0.035)S(0.035)FMFQR 45.70399999999999 0.010440000000000001 1577500.0 259.11 211.04 241.2 244.93 340.44 244.89 297.4 202.29 274.72 334.66 204.04 True False 285.41465645329964 228.8250814449445 257.56928245342715 260.0587698236104 316.5286688542413 242.89569703302075 308.7177197435243 198.25516725656502 263.1744737645341 313.529510486567 178.94437351612797 1.5949909507916196 1.2787497977650628 1.4393818447173072 1.4532939187393437 1.7688662830503195 1.357381024394874 1.7252161310101213 1.1079150652294558 1.4707054968722704 1.752105999903423 1.0 7.483367372098493 -10.951591199429407 0.4477207245467923 0.8393762616886025 1.4890685401210901 0.0 0.2858764346213092 1.3900657884871994 0.31571608207999985 0.4197358753810284 0.04400530748174105 1.117915043982717e-11 10.951591199429407 0.6496922784324877 SLEDVVR ddPTM_A549_PD325901_60min_R1 1 SLEDVVR 7 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 79.597 0.045008 1749200.0 924.78 902.79 601.9 1041.2 989.37 770.7 1021.1 1129.4 948.39 848.79 1224.1 False True 1018.6629848129465 978.8712816417802 642.7485535187307 1105.512559263232 919.8800643412084 764.4236747247709 1059.9585192673599 1106.8732310028395 908.5324664150646 795.1972545445926 1073.5434602092348 0.9488791302537561 0.9118133712546646 0.5987168450483209 1.029779045040027 0.8568633673777145 0.7120565706541436 0.9873457000620849 1.0310465034988976 0.8462931405105767 0.7407219959121243 1.0 10.068164881596253 -7.809687507520517 24.99985424524179 0.9390795334130212 0.844157760173452 0.07302585752795387 0.13153172683856906 185.2485363397535 95986.14247063367 0.018638552646352845 0.025752897276573726 1.549931456272703e-08 7.809687507520517 -0.09492177323956918 SLEEMS(ph)LRR ddPTM_A549_PD325901_60min_R1 2 SLEEMSLRR 9 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SLEEMS(1)LRR;SLEEMS(1)LRR 138.25 1.7997e-05 10849700.0 1218.69 1142.1100000000001 1760.66 1576.21 1924.04 1689.29 1861.03 2020.81 1693.9 1977.37 2092.74 True False 1342.41051164784 1238.3596179353938 1880.1489753086687 1673.568911867362 1788.902067977661 1675.5329823223137 1931.8525150446912 1980.5033592552231 1622.7112736959239 1852.5185207399252 1835.3462469718766 0.7314208498056824 0.6747280628810796 1.0244110496374794 0.9118545967163255 0.9746945955996895 0.9129247329144364 1.0525820499712464 1.0790897698583253 0.884144491195175 1.0093564218721023 1.0 10.84183654482432 -5.756822241469558 24.999994116397588 0.9618736193690978 0.7030743579105206 0.746149892000688 0.06201025402135143 45.599831465796115 246895.8464986218 0.009144736055011437 0.0331917051609583 1.7505630547185902e-06 5.756822241469558 -0.2587992614585771 SLENETLNKEEDCHS(ph)PTSKPPKPDQPLK ddPTM_A549_MK2206_60min_R1 3 SLENETLNKEEDCHSPTSKPPKPDQPLK 28 3 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SLENETLNKEEDCHS(0.956)PT(0.022)S(0.022)KPPKPDQPLK;SLENETLNKEEDCHS(0.996)PT(0.004)S(0.001)KPPKPDQPLK;SLENETLNKEEDCHS(0.814)PT(0.142)S(0.044)KPPKPDQPLK 128.33 9.7423e-28 264065600.0 8920.9 10183.3 9518.8 8181.5 10939.1 10103.7 8868.8 9232.4 12653.3 11822.3 13535.7 True False 10426.529824935162 10701.58647360896 10868.708973122886 10185.967867281497 9329.972880938147 11172.866827706745 10480.14616039334 10541.120973039195 9787.347753168036 9151.634219056057 10174.412123684604 1.024779584135742 1.051813740540072 1.0682395052410012 1.0011357652369903 0.9170036329882174 1.0981338962767075 1.0300493073203738 1.0360422641521414 0.9619570776364036 0.8994754790551817 1.0 13.312657817702227 -8.75196007275175 24.983289650953218 0.9820352862842812 1.028265634934983 0.25985294056816743 0.050242195364136856 248.21939003105922 654196.8675294925 0.007543791317528259 0.00849906062527784 1.77027170233482e-09 8.75196007275175 0.04623034865070186 SLENETLNKEEDCHS(ph)PTSKPPKPDQPLK ddPTM_A549_PD325901_60min_R1 6 SLENETLNKEEDCHSPTSKPPKPDQPLK 28 3 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SLENETLNKEEDCHS(0.993)PT(0.003)S(0.004)KPPKPDQPLK;SLENETLNKEEDCHS(0.996)PT(0.004)S(0.001)KPPKPDQPLK;SLENETLNKEEDCHS(0.947)PT(0.042)S(0.011)KPPKPDQPLK;SLENETLNKEEDCHS(0.976)PT(0.02)S(0.003)KPPKPDQPLK;SLENETLNKEEDCHS(0.99)PT(0.008)S(0.002)KPPKPDQPLK;SLENETLNKEEDCHS(0.974)PT(0.022)S(0.004)KPPKPDQPLK 222.04 1.2855e-104 273783200.0 19515.8 18852.699999999997 22518.7 20769.4 21885.2 21810.7 21850.0 24877.000000000004 16919.8 20598.3 22227.8 True False 21497.029649227377 20441.4831925564 24046.95439794358 22052.27866727022 20348.05905184128 21633.080890514528 22681.513706778773 24380.808719371034 16208.719646189438 19297.71982267212 19493.92151363354 1.102755524802586 1.0486080585817563 1.2335616710637605 1.1312387121209775 1.0438155831093492 1.1097346870605238 1.1635172374586567 1.2506877439882853 0.8314755773923416 0.9899352374623955 1.0 14.250736720488025 -8.766215158294736 24.999969380932775 0.920419021292054 1.1327411214245466 0.5745156804269893 0.07417230508410402 61.80711908829573 323543.6583748338 0.014579595419920176 0.015766933035194133 1.7131083885988288e-09 8.766215158294736 0.21232210013249264 SLENPT(ph)PPFTPK ddPTM_A549_MK2206_60min_R1 1 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.001)LENPT(0.996)PPFT(0.003)PK 79.089 0.00098848 6531700.0 2486.9 3146.7 2777.4 2851.7 4152.5 2887.8 3132.4 2784.2 4752.3 4565.7 4914.3 True False 2906.6279211325405 3306.853589357606 3171.2770834508033 3550.366628017677 3541.6727507834876 3193.3850792335 3701.5165335576526 3178.8688762548977 3675.911637863678 3534.305198983638 3693.9436822198545 0.7868630848713478 0.8952095304740464 0.8585071555679599 0.9611317695791465 0.958778220640099 0.864492085952554 1.0020500722234205 0.8605623554998474 0.9951184842251466 0.956783725749635 1.0 11.850946155854801 -2.000000000000265 0.18907467814731307 1.0130335301668423 0.143885609924756 0.43482710814475045 0.05170086999944154 26.010716817158528 0.2807357091044293 0.04345716537047568 6.665619037311896 0.009999999999993896 2.000000000000265 -0.8691479202420863 SLENPT(ph)PPFTPK ddPTM_A549_PD325901_60min_R1 2 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SLENPT(0.999)PPFT(0.001)PK;SLENPT(1)PPFTPK 145.0 8.4524e-12 18739700.0 11516.9 11130.7 11943.8 12032.2 13029.8 12381.9 12801.4 13245.6 13444.2 13098.8 14223.3 True False 12686.087209706327 12068.723152195047 12754.378091903985 12775.401666891148 12114.631798369737 12281.06591160586 13288.564282194866 12981.406117027824 12879.187027464875 12271.739532544807 12473.924268927381 1.0170085160214934 0.9675161474451394 1.0224832071231358 1.0241686089689312 0.9711965166044303 0.984539079028888 1.0653074361928554 1.0406834158328653 1.0324887942078504 0.9837914090206386 1.0 13.606627784787273 SLENPTPPFT(ph)PK ddPTM_A549_MK2206_60min_R1 2 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SLENPT(0.003)PPFT(0.997)PK;SLENPT(0.007)PPFT(0.993)PK 85.45700000000001 0.00041806 13821400.0 6027.299999999999 6920.1 7077.5 5889.4 8359.7 6926.4 5738.5 6627.6 8586.0 9429.2 11220.0 True False 7044.560886662977 7272.303531863089 8081.195923569907 7332.303264385216 7129.999204027629 7659.347050627789 6781.111169652854 7567.082596173751 6641.284709024581 7299.137171136192 8433.76434375328 0.835280735805802 0.8622844124462095 0.9581956044996071 0.8693986416416893 0.8454112438307191 0.9081765553837076 0.8040432354118937 0.8972366653543665 0.7874638700266325 0.865466104295707 1.0 13.0419609950569 -11.008001814798662 1.2914783261952347 0.9999583044357957 0.8576702165329311 0.01017556877737491 0.0596716483883703 0.2781866752902659 0.8264921792304698 0.03451685795657993 0.007849929036514512 9.817438405705969e-12 11.008001814798662 -0.14228808790286462 SLENPTPPFT(ph)PK ddPTM_A549_PD325901_60min_R1 2 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SLENPTPPFT(1)PK;SLENPTPPFT(1)PK 133.16 5.6195e-08 24886000.0 9096.8 10432.3 10198.3 9991.7 12331.5 12479.5 10392.9 10992.7 12610.400000000001 12914.8 13608.400000000001 True False 10020.300439289786 11311.466533160028 10890.41796535981 10608.864616202869 11465.377981365518 12377.871089565038 10788.407496713098 10773.44197489368 12080.428741847274 12099.357323946446 11934.653070755125 0.8395971277827672 0.947783439208454 0.9125039413207472 0.888912694261638 0.9606796203787837 1.037137067678656 0.9039565233068395 0.9027025679777072 1.0122144875287042 1.013800506157562 1.0 13.54286900877804 -2.0000000000000133 0.17009439471550347 1.02089543638241 0.40898945677102116 0.4290951405756964 0.04542112325724928 37.24189289663569 0.3781359775051985 0.05821654578516904 5.859999332385341 0.009999999999999693 2.0000000000000133 -0.6119059796113889 SLEPEES(ph)PGKR ddPTM_A549_MK2206_60min_R1 2 SLEPEESPGKR 11 1 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 PHF20 PHD finger protein 20 1 SLEPEES(1)PGKR;SLEPEES(1)PGKR 101.43 0.00010417 101570000.0 10921.2 11811.2 10326.2 9091.5 14319.7 10535.9 9701.599999999999 11023.7 16624.7 15522.0 14844.8 True False 12764.431562295504 12412.33963028587 11790.610433905704 11318.917908132938 12213.291099191892 11650.801944835599 11464.255140455542 12586.343233665362 12859.231994190659 12015.56941950281 11158.426464362623 1.1439275603116694 1.1123736550066399 1.0566552973720915 1.0143829817118828 1.0945352499474956 1.0441258883629791 1.0274078676836436 1.1279675744481688 1.1524234205656154 1.0768157551495006 1.0 13.445845975523218 -11.106188243548452 1.4723598303731122 1.0003706694363428 1.0916210815393397 0.03973142073814606 0.049552233083229404 0.4074556990808675 1.5899212884279648 0.035835978330182504 0.007932909178113345 7.830901412867533e-12 11.106188243548452 0.09125041210299689 SLEPEPQQSLEDGS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 SLEPEPQQSLEDGSPAK 17 0 Q8IV36-3;Q8IV36-2;Q8IV36 Q8IV36-3 HID1 Protein HID1 1 SLEPEPQQS(0.016)LEDGS(0.984)PAK 52.887 0.015213999999999998 905710.0 499.91 698.44 651.39 737.63 1312.3 624.53 668.9 783.34 1109.6 962.37 1052.8 True False 584.2825863739469 733.9876127215579 743.7668968780222 918.3493831134684 1119.2624083932976 690.6173500705376 790.4304716181567 894.3808438781384 858.2773716670956 744.9699486050073 791.3607041981691 0.7383265093582829 0.9275007071083428 0.9398582630301685 1.1604687701090342 1.4143517645690642 0.8726960365947058 0.9988245150724854 1.1301810149700984 1.0845589970716685 0.9413784948544213 1.0 9.628191618408625 -5.514195098464907 1.6889339823517218 1.063324387363431 0.7173326674097031 0.3430294898283517 0.13707137775575357 0.5127900361009775 2.0164143146951727 0.018824801027395067 0.2438700152046532 3.0605882142744524e-06 5.514195098464907 -0.3459917199537279 SLES(ph)DAEDHKPLK ddPTM_A549_MK2206_60min_R1 3 SLESDAEDHKPLK 13 1 Q92823-5 Q92823-5 NRCAM Neuronal cell adhesion molecule 1 S(0.202)LES(0.798)DAEDHKPLK;S(0.02)LES(0.98)DAEDHKPLK;S(0.012)LES(0.988)DAEDHKPLK 137.52 5.43e-09 26139100.0 5570.0 5798.1 5916.3 4941.8 7340.6 4796.4 4466.9 4824.4 7818.4 8368.6 8854.6 True False 6510.079826574545 6093.198524312558 6755.320302736372 6152.541221845832 6260.807464034018 5303.951864407354 5278.477909509856 5508.2734741053555 6047.544883419265 6478.127447754881 6655.758445472173 0.9781123939381047 0.9154777136567633 1.0149587546002259 0.9243937069307747 0.940660259131424 0.7968966884631404 0.793069332782162 0.8275951597751513 0.9086184441584313 0.9733116820310491 1.0 12.700387359991586 -4.319842265236872 14.282899507095612 0.928554053500474 0.912477319035496 0.0 0.07606476157203174 0.0 0.0 0.011213499205645254 0.0 4.788039612506168e-05 4.319842265236872 -0.016076734464978037 SLES(ph)DAEDHKPLK ddPTM_A549_PD325901_60min_R1 4 SLESDAEDHKPLK 13 1 Q92823-5 Q92823-5 NRCAM Neuronal cell adhesion molecule 1 S(0.013)LES(0.987)DAEDHKPLK;S(0.018)LES(0.982)DAEDHKPLK;SLES(1)DAEDHKPLK;S(0.002)LES(0.998)DAEDHKPLK 153.79 1.8462e-14 62594400.0 18716.0 18175.6 17955.2 17345.3 20675.0 18815.0 18189.899999999998 19559.7 20561.4 19237.600000000002 22442.600000000002 True False 20616.03454200901 19707.321599273757 19173.747845388792 18416.67978696555 19222.85932487792 18661.77687809337 18882.12659839521 19169.56643921218 19697.27586219458 18022.934652890654 19682.302475362947 1.0474401847962072 1.0012711482278116 0.9741618324070199 0.9356974271693251 0.9766570424847333 0.9481500907453787 0.9593454130699726 0.9739493874361205 1.0007607538218852 0.9156923929733636 1.0 14.26461137946881 -8.762142839656327 23.808263946883237 1.000359247491533 0.9748433485634143 0.0 0.03769153290281354 15.024134750613086 508490.478453697 0.004883806835531543 0.005355269784637498 1.7292475153646797e-09 8.762142839656327 -0.025515898928118785 SLES(ph)DAEDHKPLKK ddPTM_A549_MK2206_60min_R1 3 SLESDAEDHKPLKK 14 2 Q92823-5 Q92823-5 NRCAM Neuronal cell adhesion molecule 1 S(0.473)LES(0.527)DAEDHKPLKK;S(0.042)LES(0.958)DAEDHKPLKK;S(0.212)LES(0.788)DAEDHKPLKK 88.992 1.5269000000000002e-05 36921000.0 5712.1 6330.6 6101.700000000001 6307.3 8073.7 6020.6 5613.1 5682.0 9522.900000000001 8480.6 8056.5 True False 6676.162832563106 6652.8004998211645 6967.012810575274 7852.58878314546 6886.06942516572 6657.695895849165 6632.927612856743 6487.440900395204 7365.978354946455 6564.826569967505 6055.848701911614 1.1024322371950412 1.098574424047469 1.150460183784981 1.296695008358891 1.1370940332429433 1.0993827989374256 1.0952928217580742 1.0712686560923084 1.2163412128544888 1.0840473223670903 1.0 12.564113446437435 -7.00456287389909 24.828034061763617 1.101900255768046 1.1642068080920167 0.1764054041912826 0.06785895333301448 355.8900356776792 1936529.4132328148 0.013061836331063635 0.024242813748848777 9.895485940720004e-08 7.00456287389909 0.062306552323970754 SLES(ph)DAEDHKPLKK ddPTM_A549_PD325901_60min_R1 2 SLESDAEDHKPLKK 14 2 Q92823-5 Q92823-5 NRCAM Neuronal cell adhesion molecule 1 S(0.021)LES(0.979)DAEDHKPLKK;S(0.02)LES(0.98)DAEDHKPLKK 82.007 8.389799999999999e-05 74494000.0 6941.5 6971.0 7714.2 8016.4 8461.9 8471.6 8151.400000000001 8452.7 9321.7 7572.4 8331.7 True False 7646.195969937785 7558.470634726624 8237.732001253018 8511.554821434662 7867.565335970226 8402.610098350027 8461.605987617235 8284.10426748513 8929.941366084948 7094.277371686135 7306.953718997861 1.046427316223162 1.034421583248136 1.1273825342338164 1.1648568129431112 1.0767230283003972 1.1499470807517902 1.15802101847413 1.133728854193603 1.222115495663722 0.9708939791477297 1.0 12.835054354249008 -5.760182590736492 24.99237123079404 1.1185555636912765 1.0404244233585207 0.1278079001951794 0.06967519212351098 50.34204835422864 1000974.2259041257 0.010990113848083079 0.03832221188092951 1.737070357483677e-06 5.760182590736492 -0.07813114033275581 SLESLADGGS(ph)ASPIKDQPVMAVK ddPTM_A549_MK2206_60min_R1 2 SLESLADGGSASPIKDQPVMAVK 23 1 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 SLES(0.001)LADGGS(0.5)AS(0.5)PIKDQPVMAVK;SLES(0.001)LADGGS(0.5)AS(0.5)PIKDQPVMAVK 76.19800000000001 9.2327e-06 3525800.0 1068.9 1099.3 1298.1 823.58 1251.7 972.96 1037.4 1314.2 1420.2 1361.6 1502.3 True False 1249.3041879040459 1155.2496745100636 1482.1900993834124 1025.3571369719114 1067.576588116964 1075.9179814014226 1225.8821516768962 1500.491874568704 1098.5269675933748 1054.01361432773 1129.2374486292827 1.106325502595141 1.0230352136411662 1.3125584005229007 0.9080084425260022 0.9453960187140754 0.9527827674395837 1.0855840400660863 1.3287655987587605 0.9728042307902687 0.9333852819060663 1.0 10.141133163103513 -2.0000073850094093 0.08250528519995999 0.924779443739265 1.4001440628911022 0.05504494347660838 0.13571128774603286 366.7575529000336 2.1349790255309284 1.7576140849385906 19.853754936568464 0.00999982995532 2.0000073850094093 0.47536461915183714 SLESLADGGS(ph)ASPIKDQPVMAVK ddPTM_A549_PD325901_60min_R1 1 SLESLADGGSASPIKDQPVMAVK 23 1 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 SLES(0.002)LADGGS(0.533)AS(0.464)PIKDQPVMAVK 69.845 8.0843e-05 14237000.0 1413.5 1390.2 1641.9 1767.6 2039.6 1509.0 1815.8 1289.4 1411.3 1874.8 1979.8 True False 1556.9974794362975 1507.357032907324 1753.3292075467746 1876.7806374891352 1896.345532238018 1496.7112043073548 1884.9012626438862 1263.6819054852674 1351.987968927953 1756.4248080446296 1736.2971509862286 0.896734455016477 0.8681446214728481 1.009809413412256 1.0809098180130694 1.0921779899027542 0.8620132812273594 1.0855867969219724 0.7278027869639062 0.7786616295258071 1.0115922882479926 1.0 10.761798157311006 -8.242664146360584 24.75371726040622 0.8799829309044526 0.9845839990207363 0.1755521240362088 0.11001744303968551 1103.1558862887275 1454428.8831599012 0.019499141681809683 0.02515029136183171 5.719207500790254e-09 8.242664146360584 0.10460106811628378 SLESLADGGSAS(ph)PIKDQPVMAVK ddPTM_A549_MK2206_60min_R1 3 SLESLADGGSASPIKDQPVMAVK 23 1 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 SLES(0.003)LADGGS(0.461)AS(0.536)PIKDQPVMAVK;SLESLADGGS(0.12)AS(0.88)PIKDQPVMAVK;SLESLADGGS(0.149)AS(0.851)PIKDQPVMAVK 150.18 4.6372e-28 10181500.0 4963.2 5431.299999999999 5921.0 6017.5 7298.299999999999 5526.4 5364.43 5227.900000000001 8244.699999999999 7401.500000000001 7114.0 True False 5800.866821410197 5707.729971042031 6760.686833409743 7491.787770135844 6224.729737999552 6111.199979872578 6339.077492693356 5968.970834772282 6377.288614080476 5729.496009435001 5347.397463588308 1.0848018799630417 1.0673846501793278 1.26429480498595 1.4010156942978704 1.1640671523643429 1.1428363089680882 1.1854509667286997 1.1162384833774586 1.1925967084932325 1.071455048637864 1.0 12.384621198622595 -10.96290631860652 0.5043192302360603 0.9447060207162559 1.1897032881846212 0.26531066094289824 0.08957437253348989 1.6542021404973317 0.48756200547288864 0.20532144600149996 0.021928602517524876 1.0891650111049327e-11 10.96290631860652 0.24499726746836537 SLESLADGGSAS(ph)PIKDQPVMAVK ddPTM_A549_PD325901_60min_R1 3 SLESLADGGSASPIKDQPVMAVK 23 1 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 SLESLADGGS(0.049)AS(0.951)PIKDQPVMAVK;SLESLADGGS(0.207)AS(0.793)PIKDQPVMAVK;SLESLADGGS(0.16)AS(0.84)PIKDQPVMAVK 157.31 2.0386999999999998e-33 22557600.0 8387.1 8452.1 9343.7 8237.4 9625.8 9982.0 9532.2 9608.1 9771.8 8957.5 10935.5 True False 9238.552217743318 9164.388129647528 9977.819670232539 8746.205489507249 8949.717015207256 9900.709901521555 9894.953087219985 9416.458908091368 9361.125228349863 8391.92192130349 9590.502825846 0.9633021735675641 0.9555690974773386 1.0403854575114388 0.9119652690093155 0.9331853790906715 1.0323452358347218 1.0317449738457407 0.9818524720846136 0.9760828392774178 0.8750241852478907 1.0 13.227390741755054 -7.251289670447785 24.989554197134172 0.994185762831989 0.9622856662337409 0.01929322058846339 0.04963928611131688 1046.0024122338102 2575357.4696386484 0.0051470832724390915 0.008858499526396038 5.6067388693414046e-08 7.251289670447785 -0.03190009659824811 SLESS(ph)KEIPEQR ddPTM_A549_MK2206_60min_R1 4 SLESSKEIPEQR 12 1 Q9BXY4;Q9BXY4-2 Q9BXY4 RSPO3 R-spondin-3 1 S(0.002)LES(0.101)S(0.897)KEIPEQR;SLES(0.021)S(0.979)KEIPEQR;S(0.058)LES(0.207)S(0.735)KEIPEQR;SLES(0.04)S(0.96)KEIPEQR 136.83 1.2619000000000002e-13 225588000.0 24663.0 27694.4 25801.8 22129.6 32857.5 26097.9 22943.7 23796.9 34522.6 34797.7 32639.1 True False 28825.51144754184 29103.926667653523 29460.883218758885 27551.35299343548 28024.205276067056 28859.562455616047 27112.273301936762 27170.183449949785 26703.286221263937 26936.875401947767 24533.91067666646 1.1749252627285796 1.1862734421436318 1.2008229591696662 1.1229906783527515 1.1422640950070844 1.1763131787654058 1.1050938294856725 1.1074542419277091 1.0884235527384027 1.0979446268045112 1.0 14.58248959567701 -9.384208458247137 0.20410519609746597 0.9382414812792671 1.2192834980279008 0.587699076860464 0.03530863398155607 0.6689596602820062 0.08816392300088553 0.06504008589058964 0.036978382611876186 4.1284928971555995e-10 9.384208458247137 0.2810420167486337 SLESS(ph)KEIPEQR ddPTM_A549_PD325901_60min_R1 2 SLESSKEIPEQR 12 1 Q9BXY4;Q9BXY4-2 Q9BXY4 RSPO3 R-spondin-3 1 S(0.003)LES(0.151)S(0.845)KEIPEQR;S(0.002)LES(0.21)S(0.788)KEIPEQR 112.02 1.5845e-05 361010000.0 19759.1 18858.6 19450.3 20053.2 21481.1 20538.1 22400.0 22159.8 21836.1 20369.1 21299.1 True False 21765.029286119367 20447.88040626246 20770.314322155442 21291.840619878443 19972.341641771967 20370.84452298535 23252.44425775033 21717.80540497321 20918.40465408323 19082.991549787635 18679.44572611919 1.1651860341704707 1.0946727598919326 1.1119341883422496 1.1398539834673136 1.0692148971982043 1.0905486609006338 1.2448144660543532 1.1626579141267306 1.119862171543631 1.0216037365125976 1.0 14.189164026243546 -10.334914391011877 0.834196032925676 1.0038400750928325 1.1318733006064583 0.5114812625692744 0.045767875185980134 0.3679523480390695 0.4851495399748657 0.026691108539033375 0.009270994330981799 4.6247217584563445e-11 10.334914391011877 0.12803322551362584 SLET(ph)DEEDSPSEGNSSR ddPTM_A549_MK2206_60min_R1 1 SLETDEEDSPSEGNSSR 17 0 Q9P212-2;Q9P212 Q9P212-2 PLCE1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 1 S(0.007)LET(0.993)DEEDSPSEGNSSR 56.648 0.009615299999999999 715690.0 0.0 0.0 164.68 0.0 0.0 0.0 0.0 0.0 172.15 139.03 220.35 True False 0.0 0.0 188.03410027460163 0.0 0.0 0.0 0.0 0.0 133.15829986706066 107.62302643947152 165.6310136493793 0.0 0.0 1.1352590081507739 0.0 0.0 0.0 0.0 0.0 0.803945450390955 0.6497758123203687 1.0 7.371829025950819 -8.839077522213163 5.158643365717985 0.9140915045774832 0.1518047713982988 0.4458931779576666 0.3318655961620822 0.11769308122725815 5.503564272131225 0.05775456440305564 0.06137718252311316 1.4485132686863277e-09 8.839077522213163 -0.7622867331791845 SLETENAGLR ddPTM_A549_MK2206_60min_R1 1 SLETENAGLR 10 0 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 100.57 0.001241 5891700.0 2224.2 2290.3 1479.1 2048.1 2460.3 1632.8 1612.9 1424.7 2654.9 3121.9 2721.1 False True 2599.5905835308995 2406.86648733776 1688.8586210600151 2549.8845919427026 2098.393129139704 1805.5818122350793 1905.943052284235 1626.6555879607615 2053.5693890041207 2416.6606217462845 2045.3757714605213 1.2709598988134272 1.1767356008226855 0.8256960137227345 1.2466582559164332 1.02592059533458 0.8827628827077507 0.9318302675127891 0.7952844707841785 1.0040059228518918 1.1815240287219417 1.0 10.998150200602087 -5.5816544623720885 7.238283930835454 0.9847709572620543 1.2482612750682005 0.33885840940431733 0.12954638550705155 0.13136903892833643 13.20086503501418 0.015133733388488939 0.059861052535919425 2.6202669415286493e-06 5.5816544623720885 0.2634903178061462 SLFSVESDDT(ph)DTENERR ddPTM_A549_PD325901_60min_R1 2 SLFSVESDDTDTENERR 17 1 Q9Y561-2;Q9Y561 Q9Y561-2 LRP12 Low-density lipoprotein receptor-related protein 12 1 SLFSVES(0.003)DDT(0.987)DT(0.01)ENERR;SLFSVESDDT(1)DTENERR 132.13 2.4067e-12 9414800.0 3317.9 3955.3999999999996 3890.8 3735.0 4310.7 3490.6000000000004 3512.2 4216.7 4067.2 4196.3 4694.5 True False 3654.730765491117 4288.735439477507 4154.853085281072 3965.7024671995478 4007.93130310768 3462.1737109047426 3645.8586929495864 4132.594610562841 3896.2697280689927 3931.3449018549613 4117.106260887388 0.887694058375697 1.0416868469537937 1.009168290056606 0.9632256774312142 0.9734825989756755 0.8409240596473011 0.8855391291658743 1.0037619504316886 0.9463612258647905 0.9548806012618221 1.0 12.007414969191302 -3.9492726170235057 17.689629243035686 0.9642461536962049 0.9571352066852673 0.0 0.059246933501530756 0.0 0.0 0.007818272640319838 0.0 0.00011238992540747759 3.9492726170235057 -0.007110947010937618 SLGEISALT(ph)SK ddPTM_A549_MK2206_60min_R1 1 SLGEISALTSK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 SLGEISALT(0.5)S(0.5)K 147.24 1.8191e-11 5365300.0 2551.4 2799.9 2416.4 2184.7 2998.0 2978.0 2375.5 2298.4 3294.7 3831.9 3487.6 True False 2982.0139442589407 2942.4029506601723 2759.081855134488 2719.9515980749084 2556.998171426585 3293.1299833635885 2807.0976010299473 2624.205238554793 2548.455710554774 2966.2711286298686 2621.5326671367156 1.1375078333530548 1.1223979725852193 1.0524689963707399 1.0375425155566296 0.9753829137744005 1.2561849885168141 1.0707849023662592 1.0010194690501402 0.9721243387511331 1.1315026380616047 1.0 11.356194808171324 -8.246492905654058 4.3344159103006765 0.9871320929089558 1.0931061502136827 0.07639524744036019 0.0795069914892663 0.17463200932806736 8.239496119873577 0.010777097327792709 0.01366884424545313 5.669008319626741e-09 8.246492905654058 0.10597405730472698 SLGEISALT(ph)SK ddPTM_A549_PD325901_60min_R1 2 SLGEISALTSK 11 0 P18206;P18206-2 P18206 VCL Vinculin 1 SLGEISALT(0.988)S(0.012)K;SLGEISALT(0.987)S(0.013)K 136.38 4.1018e-08 17223800.0 6660.7 6791.8 6917.2 6760.200000000001 8121.4 7082.3 7268.5 7843.5 7254.9 7487.9 8740.400000000001 True False 7336.889360651815 7364.168821824173 7386.642788502682 7177.762200471858 7550.980881309003 7024.624096929085 7545.106744975811 7687.055239393284 6950.001782594346 7015.112716106992 7665.386209960621 0.957145427469532 0.9607042124315879 0.9636360890602313 0.9363862438065899 0.9850750731250884 0.916408371935792 0.9843087534417359 1.0028268672757161 0.9066734006909287 0.9151675498086912 1.0 12.904142766586354 SLGEKS(ph)PAASGAR ddPTM_A549_MK2206_60min_R1 1 SLGEKSPAASGAR 13 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 S(0.001)LGEKS(0.789)PAAS(0.21)GAR 48.376000000000005 0.0090914 33365000.0 3486.7 3861.7 3148.2 3004.3 4900.5 3507.9 3495.4 4189.1 5000.6 5549.7 6342.0 True False 4075.1697183693873 4058.244035345684 3594.662099128615 3740.353634868152 4179.642941653095 3879.1036496444362 4130.468934809543 4782.9177535807 3867.972084317302 4296.018915565954 4767.106369704392 0.8548518540025967 0.8513013389288681 0.7540553577686415 0.7846171964272933 0.8767672918345797 0.8137229062679756 0.866452018159115 1.0033167675839565 0.8113878282428916 0.9011795798952037 1.0 12.218898101664584 -14.999999999999998 0.23603178198466387 1.913825701291289 0.8214778052764875 0.25493451273188483 0.06551518655598912 28.621201694664602 0.36157014536390836 12.219816744711371 0.03581882022329871 1.000000000000004e-15 14.999999999999998 -1.0923478960148014 SLGEKS(ph)PAASGAR ddPTM_A549_PD325901_60min_R1 2 SLGEKSPAASGAR 13 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 S(0.052)LGEKS(0.836)PAAS(0.112)GAR;S(0.003)LGEKS(0.961)PAAS(0.037)GAR 98.07700000000001 4.5002e-05 145110000.0 14008.7 15433.9 14242.099999999999 14334.9 17728.1 16098.0 14757.099999999999 15451.3 17614.9 17462.199999999997 23259.0 True False 15430.852911340118 16734.568918276767 15208.654550704623 15220.334216079995 16482.93941462483 15966.903225274893 15318.689515894965 15143.111700189635 16874.607010464813 16359.633711882298 20398.29045094893 0.7564777523119479 0.8203907557115049 0.7455847629621881 0.7461573435616975 0.8080549423619979 0.7827569307177951 0.7509790858567923 0.742371608866133 0.8272559433861677 0.8020100385971927 1.0 14.316160626781217 -10.069511360681759 0.616781571381402 1.0024144621418642 0.7681494057493417 0.20455569109282945 0.06305025450835561 0.17940614838917815 0.1319475367188443 0.02026789591385055 0.007068889033026746 8.520962211567769e-11 10.069511360681759 -0.2342650563925226 SLGGIS(ph)PSEDR ddPTM_A549_MK2206_60min_R1 2 SLGGISPSEDR 11 0 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5;H3BMM1 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 SLGGIS(0.88)PS(0.12)EDR;SLGGIS(0.5)PS(0.5)EDR 115.33 2.1196e-05 20549600.0 2905.3 3364.8999999999996 2760.8 2803.8 4376.0 3238.2 2859.7 3641.7 4829.700000000001 3944.2 4048.1 True False 3395.643612234655 3536.1590373500526 3152.3229538384758 3490.731125867365 3732.2961968521495 3580.8641746568037 3379.2704734436265 4157.92212723851 3735.7806614460796 3053.2024806341337 3042.8450481236755 1.1159436509356686 1.1621226126945148 1.0359787974686085 1.1471931927719656 1.2265810903363659 1.1768145002535997 1.110562785813692 1.3664587126454009 1.2277262240973106 1.003403864589439 1.0 11.571205153514475 -4.221976016827102 16.15024189662497 1.1374963199190435 1.1402464624473088 0.0 0.10406705744020939 0.0 0.0 0.015049446292200957 0.0 5.9982419961047196e-05 4.221976016827102 0.0027501425282652203 SLGGIS(ph)PSEDR ddPTM_A549_PD325901_60min_R1 1 SLGGISPSEDR 11 0 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5;H3BMM1 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 SLGGIS(0.944)PS(0.056)EDR 114.02 2.3534000000000002e-05 15116000.0 5576.7 4804.4 4769.8 4808.4 5239.8 4507.0 4127.2 3562.3 4415.4 4917.5 5197.8 True False 6142.842478650442 5209.283649043268 5093.507311137467 5105.403947331271 4871.7745243286745 4470.296486291085 4284.2628544905 3491.247131929711 4229.836092967108 4607.008210774198 4558.503551568956 1.3475568043675614 1.142761783579246 1.1173639010074636 1.1199736688971278 1.0687223272321233 0.980649995271472 0.9398397535559522 0.7658757073312109 0.9279001420348293 1.010640478537863 1.0 12.154344584259887 -5.679488699589311 0.5971077714369836 0.947503878074564 1.4265645991519424 0.7333803938037077 0.07336303432516601 1.0003721363629934 0.3208912258974401 0.014183728264940618 0.29725078282743833 2.0917573342494026e-06 5.679488699589311 0.4790607210773784 SLGGIS(ph)PSEDRR ddPTM_A549_MK2206_60min_R1 2 SLGGISPSEDRR 12 1 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5;H3BMM1 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 SLGGIS(0.996)PS(0.004)EDRR;SLGGIS(0.99)PS(0.01)EDRR 100.54 0.00010094 71222000.0 1697.19 1447.63 1861.56 1483.1599999999999 1984.6399999999999 1638.27 1594.85 1675.54 2696.0 2502.8 2334.7 True False 1983.6341796883419 1521.3081836723409 2125.557200067933 1846.5342665815817 1692.7020850367112 1811.6306440043863 1884.6136009272188 1913.052926126044 2085.3603046273333 1937.4157417299086 1754.929555558003 1.1303212561472984 0.866877065722801 1.2111923201339465 1.0521985117484969 0.9645413285540652 1.032309609389623 1.073897009118398 1.0901024032943383 1.188287186812046 1.1039849067411038 1.0 10.777197405284882 -7.924562290888338 3.9348001408491236 1.091191066115178 1.0395794321049585 0.06728054806917949 0.09109694619703836 0.5860218674185766 17.961081058555372 0.015876930785106273 0.022135072759079416 1.1897006780694588e-08 7.924562290888338 -0.05161163401021951 SLGGQQGS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SLGGQQGSPK 10 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SLGGQQGS(1)PK;S(0.001)LGGQQGS(0.999)PK 125.82 1.124e-05 66863000.0 9136.099999999999 10207.3 9355.0 8324.4 11048.1 9192.2 8993.3 9728.900000000001 13512.0 13067.1 14932.5 True False 10678.050323800315 10726.807971096674 10681.679670080743 10363.878373696514 9422.939125329576 10164.912502711471 10627.266198839243 11108.00136850667 10451.553574230165 10115.233034504907 11224.348133965768 0.9513292171941538 0.9556731351406058 0.9516525630345635 0.9233389992898203 0.8395088082500769 0.9056127252460782 0.9468047562317041 0.9896344300737586 0.9311501611931418 0.9011866804002104 1.0 13.454344040889767 -10.868802353181882 0.4283723286789759 1.0221935134272595 0.9271999492646072 0.0 0.046048581042527875 2.2338654163540776 0.4832569648542867 0.09475103770853732 0.010938122859480955 1.3526880295863014e-11 10.868802353181882 -0.09499356416265226 SLGGQQGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SLGGQQGSPK 10 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SLGGQQGS(1)PK;SLGGQQGS(1)PK 162.49 6.7882e-09 110246000.0 19016.1 17783.4 18667.4 18290.7 19917.1 21252.7 21019.7 20039.1 21184.7 19419.3 20899.3 True False 20946.60047308708 19282.069528847736 19934.2820201953 19420.474997806366 18518.191606264867 21079.625057510217 21819.61618592118 19639.40443013017 20294.380730778706 18193.16208388154 18328.818591578187 1.1428232740931663 1.052008313165779 1.0875923028314982 1.059559561941967 1.010331981504454 1.1500809477811071 1.1904540424633239 1.0715041087893236 1.1072388888230726 0.9925987314993133 1.0 14.16182617759308 -10.696570516728796 0.8970900840972001 0.9984824790593462 1.095541779704155 0.3878124865538859 0.04834781539896018 0.5693472634699984 0.7943631090876376 0.0366212619728303 0.0090125255236467 2.0110806309815066e-11 10.696570516728796 0.09705930064480872 SLGKDGS(ph)LEDDEDEEDDLDEGVGGK ddPTM_A549_PD325901_60min_R1 2 SLGKDGSLEDDEDEEDDLDEGVGGK 25 1 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 SLGKDGS(1)LEDDEDEEDDLDEGVGGK;SLGKDGS(1)LEDDEDEEDDLDEGVGGK 279.68 1.8088999999999997e-153 94315000.0 7406.9 6354.7 7735.8 6694.4 9763.2 8042.299999999999 8265.1 8400.9 8096.5 8398.4 9228.8 True False 8158.843035328414 6890.232870821589 8260.797907144368 7107.897883914497 9077.466513211522 7976.80617521607 8579.63290333626 8233.337459121443 7756.232261337179 7868.123590720088 8093.7161061833085 1.0080466040926925 0.8513064679347597 1.0206433977630394 0.8781995551443073 1.121544960821725 0.9855554692759827 1.060036303569102 1.0172505868881996 0.958302979692072 0.972127448936481 1.0 12.982586530829735 SLGLSLS(ph)GGDQEDAGR ddPTM_A549_MK2206_60min_R1 2 SLGLSLSGGDQEDAGR 16 0 H0YE82;H7C1L7;H0YEB7;C9JEV6;H7C3G9;Q9UJ70;Q9UJ70-2 H0YE82 NAGK N-acetyl-D-glucosamine kinase 1 SLGLSLS(1)GGDQEDAGR;SLGLSLS(1)GGDQEDAGR 174.59 3.5007999999999998e-28 33345000.0 4433.1 4601.8 4446.0 4176.1 5964.9 4792.6 4667.7 4715.200000000001 6519.4 6313.7 7168.299999999999 True False 5181.2989011108875 4836.0119641229985 5076.509654000963 5199.244687472252 5087.471111655251 5299.749750929591 5515.760670312559 5383.594039694379 5042.7663093425235 4887.430784944914 5388.213274984549 0.9615987038162934 0.8975168051670832 0.9421508383065108 0.9649292672972677 0.9441851782806128 0.9835820299716679 1.023671556565915 0.9991427148380307 0.9358884015883696 0.9070596384214078 1.0 12.395591241006661 -6.524279525155142 1.4004707570160568 0.9759522937032121 0.929185023677296 0.1835140033173649 0.034056737954274795 0.4693903404306242 1.7807663120197077 0.00493926772037083 0.015906534563263058 2.990339343612676e-07 6.524279525155142 -0.046767270025916075 SLGLSLS(ph)GGDQEDAGR ddPTM_A549_PD325901_60min_R1 2 SLGLSLSGGDQEDAGR 16 0 H0YE82;H7C1L7;H0YEB7;C9JEV6;H7C3G9;Q9UJ70;Q9UJ70-2 H0YE82 NAGK N-acetyl-D-glucosamine kinase 1 SLGLS(0.052)LS(0.948)GGDQEDAGR;SLGLS(0.001)LS(0.999)GGDQEDAGR 153.97 6.8386e-17 49382000.0 8974.2 9263.3 9494.5 8252.4 9916.8 9540.4 8887.8 10801.400000000001 10211.0 10158.8 10216.8 True False 9885.25417754314 10043.950800554172 10138.853865066596 8762.132005439771 9220.278179102746 9462.706145509539 9226.030092590778 10585.957603465626 9781.867179709003 9517.37163428835 8960.198369631325 1.1032405500136129 1.1209518345705374 1.131543459956207 0.9778948683923273 1.0290261218270464 1.0560822154988618 1.0296680622451877 1.1814423260253326 1.0917020780323958 1.062183139443145 1.0 13.129314957091776 -10.69874309424595 1.0515723297859616 1.0017045074457067 1.0790642936817227 0.06585339651180022 0.0562856637479877 0.6266174391319842 1.272608308457242 0.03395305097147274 0.00972750873112025 2.0010452326143657e-11 10.69874309424595 0.07735978623601603 SLGLWTT(ph)SPESSSR ddPTM_A549_MK2206_60min_R1 1 SLGLWTTSPESSSR 14 0 H0YEJ7;E9PJK4;A6NI28 H0YEJ7 ARHGAP42 Rho GTPase-activating protein 42 1 SLGLWT(0.054)T(0.472)S(0.472)PESSSR 60.628 0.007335300000000001 1025100.0 1133.1 1343.7 1266.0 1276.9 1650.6 1254.9 1482.5 1373.7 2483.9 1850.6 2149.9 True False 1324.3395783647438 1412.0885905932619 1445.53783669933 1589.7405573222202 1407.7989265365982 1387.692685064797 1751.8510602091744 1568.426181779812 1921.3006159732306 1432.5481747024808 1616.020495778537 0.819506671991018 0.8738061146390173 0.8945046430261548 0.9837378680994661 0.8711516532210654 0.8587098299123116 1.0840525010576672 0.9705484465555643 1.1889085695337183 0.8864665877967925 1.0 10.658229780382081 -7.766008656467268 24.982098852060886 1.0803342295483116 0.8876113842854322 0.32741630085382045 0.08692539706098887 63.06336651909221 344793.620470836 0.012729823856634218 0.01790947506992823 1.7139231448190857e-08 7.766008656467268 -0.19272284526287942 SLGNILQAKPTS(ph)SPAK ddPTM_A549_PD325901_60min_R1 2 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.003)S(0.498)S(0.498)PAK;SLGNILQAKPTS(0.5)S(0.5)PAK 237.5 9.230699999999998e-66 544807900.0 24692.2 25196.7 25651.1 22734.7 30749.2 24547.1 26598.5 26498.3 27561.3 26914.9 30171.7 True False 27198.933966563112 27320.114336826322 27391.937898594966 24138.9707847501 28589.482270981218 24347.19655616507 27610.720472757697 25969.7706189858 26402.994408002523 25215.488620674427 26460.77217416467 1.0278964569718474 1.0324760803277193 1.0351904214397587 0.9122549646649583 1.0804477693547787 0.9201241897217489 1.04345860699091 0.9814441713209614 0.9978164746749696 0.9529385028791377 1.0 14.691567542284083 SLGNILQAKPTS(ph)SPAKGPPQK ddPTM_A549_MK2206_60min_R1 2 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.118)S(0.441)S(0.441)PAKGPPQK;SLGNILQAKPT(0.052)S(0.474)S(0.474)PAKGPPQK 113.54 4.5059e-12 378861900.0 6001.3 7431.2 7829.1 7227.799999999999 10322.0 7115.6 7904.6 6474.0 10555.1 10174.3 11068.6 True False 7014.172722301942 7809.416338778478 8939.384105294406 8998.611324468271 8803.647473470719 7868.56806904699 9340.763501200303 7391.709325793477 8164.386703031144 7875.91856364177 8319.961142180715 0.8430535434524256 0.9386361553043961 1.0744502230873805 1.0815689124852905 1.0581356478743393 0.9457457714741908 1.1226931642558164 0.8884307509945969 0.9813010618089505 0.946629248508418 1.0 13.022361075033972 -5.441822869476736 3.76340430142085 1.0046814116059268 0.8488437268444009 0.35856651857022326 0.06671190096216119 0.1915118791090837 4.73336407243262 0.00847462718113417 0.05946196911692035 3.6155729664440445e-06 5.441822869476736 -0.15583768476152593 SLGNILQAKPTS(ph)SPAKGPPQK ddPTM_A549_PD325901_60min_R1 3 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.109)S(0.445)S(0.445)PAKGPPQK;SLGNILQAKPT(0.079)S(0.624)S(0.297)PAKGPPQK;SLGNILQAKPT(0.302)S(0.349)S(0.349)PAKGPPQK 159.51 4.7617e-28 795919000.0 14403.9 13989.199999999999 15660.300000000001 15662.9 17336.1 18168.6 17062.1 19340.1 17598.1 16326.599999999999 19090.5 True False 15866.17332440925 15168.118979101664 16723.10213103401 16630.36175997317 16118.472142298246 18020.64094538013 17711.40755223936 18954.346533485048 16858.513056041236 15295.735689685009 16742.489524650275 0.9476591459740317 0.9059655648444256 0.9988420244439921 0.9933028021602154 0.9627285188721022 1.0763417781356834 1.0578718013329218 1.13211040123861 1.006929885261098 0.9135878906876314 1.0 14.031226444942218 -5.879953805266733 4.30961240956283 1.0176271864748239 0.9271363606434743 0.2788731983496321 0.055603275350525144 0.17893857647501218 5.790923243106613 0.006803645587755956 0.023101259643757834 1.3183969654295703e-06 5.879953805266733 -0.0904908258313496 SLGNILQAKPTSS(ph)PAK ddPTM_A549_MK2206_60min_R1 4 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.002)S(0.143)S(0.855)PAK;SLGNILQAKPT(0.122)S(0.122)S(0.755)PAK;SLGNILQAKPTS(0.089)S(0.911)PAK;SLGNILQAKPT(0.001)S(0.175)S(0.824)PAK 205.68 1.7758e-40 612700400.0 27979.18 27834.379999999997 29771.450000000004 25239.61 37988.939999999995 26949.329999999998 26280.67 28063.04 36552.4 37896.0 39015.899999999994 True False 32701.381558724966 29251.031051750568 33993.48927993859 31423.31558304914 32400.817249644515 29801.09021308253 31055.527556497444 32041.0618594556 28273.339762188476 29335.26728008496 29327.175245939703 1.1150539144833738 0.9974036301297147 1.159112290729225 1.071474334624152 1.1048052523957401 1.0161595845207916 1.0589334736831508 1.0925382888313333 0.964066246581415 1.0002759227261881 1.0 14.839950498890826 -8.760846712719461 24.999853812831233 0.9830312799701919 1.075144366777467 0.45408363282151654 0.043243270311891534 9.165706637722927 386623.67052416207 0.00700136193104476 0.007709806960869396 1.7344160640342952e-09 8.760846712719461 0.09211308680727504 SLGNILQAKPTSS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPTS(0.082)S(0.918)PAK;SLGNILQAKPT(0.001)S(0.168)S(0.831)PAK 196.55 9.5371e-40 599630800.0 21919.5 22017.6 23336.2 22791.4 27027.1 22191.2 21812.4 22342.8 25255.3 25335.2 27808.8 True False 24144.751503716965 23873.100422773932 24919.93486397042 24199.17301497506 25128.809734433293 22010.482224668922 22642.482818203265 21897.155326412478 24193.90756867153 23735.531148267728 24388.49389450746 0.9900058448937108 0.978867351384515 1.0217906432337194 0.9922372869619867 1.0303551274272233 0.9024945254871154 0.9284084091516034 0.8978477892537654 0.9920213881727337 0.9732266064044739 1.0 14.573913047153997 -4.114112634012953 15.805723802847865 0.9828588875092212 0.9817803251993436 0.0 0.04374228476930648 0.0 0.0 0.00600055490588521 0.0 7.689309926334556e-05 4.114112634012953 -0.0010785623098776842 SLGNILQAKPTSS(ph)PAKGPPQK ddPTM_A549_MK2206_60min_R1 2 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.058)S(0.366)S(0.576)PAKGPPQK;SLGNILQAKPT(0.158)S(0.12)S(0.722)PAKGPPQK 107.49 2.0617e-10 415367000.0 6744.5 7537.2 6960.700000000001 6167.0 9706.1 7002.700000000001 6816.3 7315.5 9813.6 9292.7 10770.6 True False 7882.80671280647 7920.811286015876 7947.8319272614735 7677.915276847152 8278.345547592926 7743.721065983949 8054.733478383681 8352.49452777915 7590.835269098958 7193.472615939556 8095.962766562309 0.973671314962538 0.9783655773134434 0.9817031224609084 0.9483634619168749 1.022527621024134 0.9564916847155995 0.994907426161974 1.0316863810535741 0.9376074826394196 0.8885259015332692 1.0 12.982986939736376 SLGNILQAKPTSS(ph)PAKGPPQK ddPTM_A549_PD325901_60min_R1 1 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.04)S(0.183)S(0.777)PAKGPPQK 89.979 5.758e-07 871310000.0 6879.3 7319.8 7406.8 7061.9 9062.4 9764.3 8979.9 9303.1 9752.3 9131.7 9228.0 True False 7577.681471727004 7936.665234840335 7909.469988706645 7498.097524261439 8425.888287582768 9684.782778143352 9321.635008489828 9117.54237235924 9342.444745536794 8555.12290357433 8093.014501111689 0.9363237234637479 0.9806809605679222 0.9773206247956393 0.9264900641450067 1.041131000868138 1.1966842240073845 1.1518124682971185 1.126594098046756 1.1543837891620579 1.0570996632218026 1.0 12.982461465159258 -6.952451474192277 5.596244257645453 1.0943670914516994 0.9600586534085542 0.6514709170101725 0.05326313946968683 0.14190166967645396 10.23304118663416 0.010459484033600362 0.01986975533273345 1.115702807218207e-07 6.952451474192277 -0.13430843804314518 SLGNILQAKPTSSPAK ddPTM_A549_MK2206_60min_R1 2 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 0 ; 186.23 3.7893999999999993e-34 22194000.0 11023.400000000001 10739.0 11642.6 10768.6 14336.8 11460.2 10980.099999999999 11311.3 16434.9 15370.3 15782.5 False True 12883.880423745404 11285.56923002235 13293.695748464153 13406.907483420819 12227.87571184412 12672.910757334927 12975.042041283477 12914.71141440343 12712.421391142349 11898.138554863039 11863.269675159196 1.0860311513210639 0.9513034381788937 1.120576039529824 1.130119086097645 1.0307340258350852 1.0682477179011667 1.0937155098524187 1.0886300124699917 1.0715782190942866 1.0029392301328912 1.0 13.534214070211096 -10.542869435336534 0.8403408036659457 0.999823613976935 1.0705556997652064 0.2539475978564413 0.04579838038724441 0.7065700822766537 0.8918935714068454 0.030566435685381855 0.008529758950086959 2.8650391750726505e-11 10.542869435336534 0.07073208578827139 SLGNILQAKPTSSPAK ddPTM_A549_PD325901_60min_R1 2 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 0 ; 155.79 3.3933e-20 19785000.0 8522.2 8324.9 9772.1 9291.1 12106.599999999999 10580.400000000001 10615.0 11353.599999999999 11353.2 10488.7 10734.4 False True 9387.367470287943 9026.468539239093 10435.293470411003 9864.990145380922 11256.27418150264 10494.236730320441 11018.959633750877 11127.143541273106 10876.064485816509 9826.441691987256 9414.136850968061 0.997156469987223 0.9588206207466482 1.1084705518528697 1.0478910920406366 1.1956777726622012 1.1147316951570885 1.17046945547831 1.1819610992938663 1.155290671677257 1.0437963509078156 1.0 13.200613109941 -5.76433616130778 24.97705514022238 1.09939280795078 0.977988523784122 0.4077798023984951 0.06100641841804597 66.59760184271828 574253.3749394261 0.010557767579112157 0.03505215462958609 1.7205362954917815e-06 5.76433616130778 -0.12140428416665794 SLGNILQAKPTSSPAKGPPQK ddPTM_A549_MK2206_60min_R1 2 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 0 ; 158.89 5.2043e-28 29692000.0 9489.2 11197.8 12694.5 11782.900000000001 15748.6 11310.599999999999 12221.7 11478.2 16383.9 16730.4 18084.199999999997 False True 11090.744971334148 11767.720190329113 14494.770985765903 14669.711028954487 13432.001802044273 12507.480184631353 14442.224689752773 13105.270000513248 12672.972809712075 12950.991020232565 13593.394041470863 0.8158922589530173 0.8656940389153757 1.0663099253611799 1.0791794149569993 0.9881271565486726 0.920114589959903 1.062444349490075 0.9640910842819357 0.9322890788753156 0.9527415287691617 1.0 13.73061809727746 -5.600281255555989 6.463740075692027 0.9837978266241384 0.8278546433809529 0.5609246320959851 0.05278159433473619 0.11111463290599088 7.197569112256081 0.007709490030009441 0.030749713085379517 2.5102602231888275e-06 5.600281255555989 -0.15594318324318546 SLGNILQAKPTSSPAKGPPQK ddPTM_A549_PD325901_60min_R1 2 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 0 ; 155.76 7.1124e-28 26486000.0 9385.8 8906.3 10747.7 9981.1 12479.1 12225.8 11566.4 12264.099999999999 12774.3 11558.0 12033.7 False True 10338.63950653923 9656.865157662563 11477.103553170395 10597.609878277213 11602.611066557884 12126.237138251072 12006.565681376942 12019.482904499666 12237.440594824871 10828.225907499385 10553.63118790938 0.9796286531581233 0.9150277270183381 1.0875028081632205 1.0041671619544768 1.0993951617193383 1.1490108875647773 1.1376715243879374 1.138895484453694 1.1595478728538975 1.0260189800743267 1.0 13.365451851983977 -5.954720365192834 1.332852843004548 1.0918138132019954 0.940719517608654 0.43560549324407005 0.0589038474452286 0.47983598065774735 1.4155423721676201 0.010630361840918694 0.06916182523538555 1.109889223974829e-06 5.954720365192834 -0.15109429559334142 SLGPPGPPFNIT(ph)PR ddPTM_A549_MK2206_60min_R1 2 SLGPPGPPFNITPR 14 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1 Q9NZM1-5 MYOF Myoferlin 1 SLGPPGPPFNIT(1)PR;SLGPPGPPFNIT(1)PR 148.85 2.7789e-13 9379900.0 4473.4 4942.700000000001 4789.8 5036.5 6548.7 4894.0 4462.4 4809.9 7940.200000000001 7131.299999999999 7739.4 True False 5228.400555870482 5194.26231802137 5469.065663682819 6270.442726097076 5585.39490501043 5411.879831625717 5273.160317758803 5491.718054700968 6141.7573778938995 5520.334377097053 5817.493383426396 0.8987376884288008 0.8928694844448704 0.9401068988344324 1.0778598810204236 0.9601033532625586 0.9302769208201866 0.9064316828931243 0.9440007392782711 1.0557394694064126 0.948919751730887 1.0 12.506181949432658 -8.74881469479883 24.916279364224412 1.0263214152265596 0.9452935928957327 0.14474154926625382 0.05395492254494787 187.21011865978616 369480.5743912177 0.009045995727625631 0.010223550681099657 1.7831394368620867e-09 8.74881469479883 -0.08102782233082695 SLGPPGPPFNIT(ph)PR ddPTM_A549_PD325901_60min_R1 2 SLGPPGPPFNITPR 14 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1 Q9NZM1-5 MYOF Myoferlin 1 SLGPPGPPFNIT(1)PR;SLGPPGPPFNIT(1)PR 162.41 2.7881999999999997e-19 14220600.0 7706.1 7923.3 8118.6 7006.5 9041.900000000001 8632.8 7866.9 8227.5 8198.1 8233.400000000001 9096.1 True False 8488.417599069011 8591.024297823767 8669.577017107766 7439.275592083974 8406.828136861612 8562.497338995718 8166.279184432859 8063.39605815111 7853.562366660697 7713.541718879166 7977.3373649287 1.0640665187844767 1.076928792756473 1.086775777494682 0.9325512074730294 1.0538388628041622 1.0733527927049438 1.0236848224991484 1.0107878969241988 0.9844841715216706 0.9669318678674321 1.0 12.96169157604476 -8.245232416039517 2.345928364968954 0.992962240516161 1.0459066236950245 0.30886188687699545 0.04010366973753983 0.3060945374674421 3.310924133088618 0.006684044280207507 0.008596744229735729 5.685485862566413e-09 8.245232416039517 0.05294438317886352 SLGPSLATDKS(ph) ddPTM_A549_MK2206_60min_R1 2 SLGPSLATDKS 11 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 SLGPSLAT(0.079)DKS(0.921);SLGPSLAT(0.036)DKS(0.964) 102.62 0.00018258 4934300.0 4988.7 6781.7 6045.700000000001 5423.0 7026.299999999999 6171.4 5329.5 5519.7 7880.700000000001 8608.0 9070.1 True False 5830.67059799505 7126.859563017279 6903.07116850959 6751.6352434477185 5992.740577683329 6824.45345175623 6297.801163834604 6302.134378372298 6095.7340328919245 6663.4468214843555 6817.743847974748 0.8552199566322936 1.0453398839755992 1.0125154776180376 0.9903034484719359 0.8789917473158674 1.000984138438037 0.9237368408473434 0.9243724198063535 0.8940984244667243 0.9773683156875677 1.0 12.735078681118724 SLGS(ph)PLLHER ddPTM_A549_MK2206_60min_R1 2 SLGSPLLHER 10 0 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 S(0.182)LGS(0.818)PLLHER;S(0.004)LGS(0.996)PLLHER 85.522 0.00025458 22309000.0 975.12 818.09 529.75 543.99 883.7 717.21 585.64 784.5899999999999 988.98 999.87 1460.2 True False 1139.6964166049145 859.7272866550875 604.8765157910505 677.2675744206394 753.7089006303117 793.1046861545326 692.043207353053 895.8080352061024 764.9776090765354 773.9986725601262 1097.5920405301733 1.038360679123004 0.7832849136185523 0.5510941164431868 0.6170485475582501 0.6866931180242938 0.7225860400476636 0.6305104098775837 0.816157554106713 0.6969598729114561 0.7051788314593272 1.0 10.100126209250753 -10.733204189239057 0.6945763441037266 1.0284677278101912 0.7144647915885298 0.0 0.14974818437770995 0.7171007866003922 0.5237836455793907 0.13384271865882486 0.0244223552592978 1.8483993654766128e-11 10.733204189239057 -0.3140029362216614 SLGS(ph)PLLHER ddPTM_A549_PD325901_60min_R1 2 SLGSPLLHER 10 0 H7C3L4;E7EQA9;Q92844;E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82 H7C3L4 TANK TRAF family member-associated NF-kappa-B activator 1 S(0.002)LGS(0.998)PLLHER;SLGS(1)PLLHER 108.72 7.1474e-05 47569000.0 1460.08 1237.33 1529.0500000000002 1653.77 1632.07 1340.13 1579.5700000000002 1308.04 1418.17 1486.82 1533.5300000000002 True False 1608.3062467459133 1341.604141510012 1632.8205279245965 1755.919616915822 1517.4390335358403 1329.2164255986852 1639.6814007238693 1281.9501160624714 1358.5692467190206 1392.941931457712 1344.915531847617 1.195841826985562 0.9975378451217259 1.2140692030535638 1.3055984374747878 1.1282783175618576 0.9883270689666549 1.219170544094549 0.9531826242658934 1.0101520984389603 1.0357096029251125 1.0 10.393299851041553 -7.936403483291523 1.0287707892777689 1.0009778198304877 1.1613623825708743 0.3247490379832082 0.09465481152284771 0.4003383626823549 0.8492370707937898 0.017178390403582922 0.026610468474732814 1.1577012886478644e-08 7.936403483291523 0.1603845627403866 SLGS(ph)VQAPS(ph)YGARPVSSAASVYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 1 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 S(0.026)LGS(0.965)VQAPS(0.845)Y(0.006)GARPVS(0.131)S(0.027)AASVYAGAGGSGSR 97.301 3.8810000000000003e-10 8272400.0 1749.9 1838.2 2410.3 1933.2 2460.6 2253.2 2725.0 2126.4 2620.6 2608.9 2261.4 True False 1927.5485597917057 1993.1115651634607 2573.877452311342 2052.6093733842486 2287.775944609171 2234.85068624608 2828.701366177215 2083.9872838714705 2510.4652953819827 2444.173608762341 1983.2621361957063 0.9719081127062354 1.0049662769172045 1.2977999253535664 1.0349662487489244 1.1535418857930617 1.1268559236112736 1.4262871833993818 1.050787611903374 1.2658262614732099 1.2324006817630044 1.0 10.953659661974426 -5.554719370732418 23.86316271579436 1.147593512626844 0.9801725030271707 0.23467066151174443 0.12276260395828384 124.11724906523416 93020.26430752657 0.01792719211906831 0.06943347891962136 2.7879220660405956e-06 5.554719370732418 -0.1674210095996732 SLGS(ph)VQAPSYGAR ddPTM_A549_MK2206_60min_R1 5 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.028)LGS(0.972)VQAPSYGAR;S(0.08)LGS(0.92)VQAPSYGAR;S(0.041)LGS(0.951)VQAPS(0.008)YGAR;S(0.041)LGS(0.957)VQAPS(0.001)YGAR;S(0.014)LGS(0.986)VQAPSYGAR 248.61 1.4358999999999998e-68 571058100.0 28880.799999999996 31074.399999999998 27632.5 25294.800000000003 36190.5 26917.899999999998 26678.0 26788.3 42365.6 37909.5 41625.3 True False 33755.17297223235 32655.954230506242 31551.204006788474 31492.027135526707 30866.925391265446 29766.334311344082 31525.04727437461 30585.62356072806 32769.85924396131 29345.717620708805 31288.58921016341 1.0788333326728494 1.0437017153812316 1.0083933089747543 1.0065019846052123 0.9865233994391478 0.9513479214868258 1.007557325855216 0.9775328428931847 1.047342180366405 0.9379047877037707 1.0 14.933348989058722 -5.483441876751216 2.3596559934190644 1.0098478524591314 1.0815971064168228 0.31925394231590065 0.032678369654119 0.33774765908641324 3.022864721938266 0.0041970882945792974 0.04034429586972911 3.2851720804316224e-06 5.483441876751216 0.07174925395769138 SLGS(ph)VQAPSYGAR ddPTM_A549_PD325901_60min_R1 5 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.1)LGS(0.9)VQAPSYGAR;S(0.001)LGS(0.999)VQAPSYGAR;S(0.014)LGS(0.985)VQAPSYGAR;S(0.063)LGS(0.937)VQAPSYGAR;S(0.008)LGS(0.992)VQAPSYGAR 279.41 2.6197999999999996e-98 2476588900.0 29598.300000000003 32137.8 35473.0 37260.0 39424.5 32540.899999999998 35312.5 36169.1 39264.4 38651.6 42937.5 True False 32603.097626883195 34846.165193618916 37880.41109647769 39561.46557640031 36655.45912714147 32275.897699301015 36656.33651124143 35447.67892638995 37614.25381362907 36211.13137967667 37656.459703238295 0.8658035801512023 0.9253701879633229 1.0059472237965095 1.0505890858613613 0.9734175601215441 0.8571145018320834 0.9734408598185119 0.9413439076786498 0.9988791859367067 0.9616180507952177 1.0 15.200609749956461 -8.770924649753006 22.533535848752862 0.9994707463306793 0.9521653385794651 0.07325031769643053 0.05414256193526678 89.12714625728192 211732.445058633 0.0094980383154071 0.010189242370794396 1.6946317941612817e-09 8.770924649753006 -0.04730540775121428 SLGSAS(ph)PGPGQPPLS(ph)SPTR ddPTM_A549_PD325901_60min_R1 1 SLGSASPGPGQPPLSSPTR 19 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 2 SLGS(0.019)AS(0.981)PGPGQPPLS(0.528)S(0.429)PT(0.044)R 98.175 1.2487e-06 6226500.0 2045.5 2170.4 2294.8 2520.3 2848.7 2913.3 2692.0 3113.0 3139.2 2632.5 2915.7 True False 2253.157654182489 2353.3072250194637 2450.5389277534205 2675.973206983405 2648.617139481488 2889.575050701536 2794.4455331189224 3050.9087728987415 3007.27034086206 2466.2835007347385 2557.0873841451403 0.881142219915078 0.920307706185879 0.9583321019639929 1.0464926711442868 1.0357945355735063 1.1300259305246816 1.09282363615944 1.1931186989601807 1.176053020130722 0.9644893311142128 1.0 11.320285747751907 -6.181903338065763 1.1093515577328696 1.097018518635952 0.8796381776745222 0.5681202937919037 0.06459926140543507 0.36803552605186857 0.754776885569119 0.011139305418466567 0.06305199746057101 6.578042300827373e-07 6.181903338065763 -0.21738034096142977 SLGSAS(ph)PGPGQPPLSS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 SLGSASPGPGQPPLSSPTR 19 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 2 S(0.002)LGS(0.035)AS(0.963)PGPGQPPLS(0.219)S(0.745)PT(0.036)R 72.568 0.00078065 7132000.0 1050.3 761.4 768.19 988.03 1326.8 757.28 1137.9 1251.6 1065.0 1218.3 1498.9 True False 1156.9256828100054 825.5658501335326 820.3239929017341 1049.058369121063 1233.6101452115129 751.1129627553834 1181.2034071827718 1226.635856138795 1020.2417536372632 1141.3763300836213 1314.5448023099605 0.8800960460054449 0.6280241256766766 0.6240365421248742 0.7980392659707176 0.9384314197916825 0.5713863547560368 0.898564586849473 0.9331259413778145 0.7761179016831237 0.8682673485741665 1.0 10.360347597381777 -14.999999999915362 0.14967919511104785 1.8208044303298183 0.6990639611267756 0.1954758610254208 0.12388124895112794 51.00964715303754 0.5030470045451718 12.399101399642449 0.2253047057033042 1.0000000001948864e-15 14.999999999915362 -1.1217404692030426 SLGSASPGPGQPPLSS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 SLGSASPGPGQPPLSSPTR 19 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 SLGSASPGPGQPPLS(0.462)S(0.537)PT(0.001)R;SLGSASPGPGQPPLS(0.003)S(0.997)PTR 356.92 1.0626999999999995e-255 110300000.0 12851.6 14200.0 14182.099999999999 12790.7 18800.699999999997 14197.400000000001 12304.0 13417.7 21045.4 20944.4 20925.0 True False 15020.63588854677 14922.719346896114 16193.335034639462 15924.422074196349 16035.141935136695 15699.759444528601 14539.477534444313 15319.700064982882 16278.650502597946 16213.045493482463 15728.744999379447 0.9549799357252843 0.948754611221993 1.0295376417685165 1.0124407303204814 1.0194800625078058 0.9981571603550068 0.924388915645714 0.9739937970631031 1.0349618169307337 1.030790790627105 1.0 13.941115941885814 -8.752132291043653 24.968605748138852 1.0165097473430138 0.9839319216528438 0.22993413750782377 0.03147215072426182 265.08578878332787 711159.2117665167 0.005808741373794351 0.006543487772892833 1.769569845090118e-09 8.752132291043653 -0.03257782569016998 SLGSASPGPGQPPLSS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 SLGSASPGPGQPPLSSPTR 19 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 SLGSASPGPGQPPLS(0.226)S(0.774)PTR;SLGSASPGPGQPPLS(0.231)S(0.765)PT(0.004)R;SLGSASPGPGQPPLS(0.396)S(0.6)PT(0.005)R;SLGSASPGPGQPPLS(0.446)S(0.553)PT(0.001)R 290.18 2.0580999999999993e-143 155072000.0 22302.100000000002 22020.6 22877.1 24080.800000000003 25810.2 24107.2 23953.8 24010.1 25211.0 26001.100000000002 30314.699999999997 True False 24566.19277406174 23876.353243302434 24429.67757717784 25568.21632453517 23997.380592356203 23910.878955916676 24865.3749670223 23531.199719940938 24151.469343614113 24359.38610862451 26586.184080716357 0.924021014052943 0.8980737202004317 0.9188861967933681 0.9617106481663329 0.9026259849664593 0.8993723538256794 0.9352743098268772 0.8850912808133575 0.9084218054870009 0.9162422871469169 1.0 14.698389101352412 -10.64539549791616 0.8532517249135815 1.0016254332001284 0.9147095485619178 0.007935589272240806 0.03133213250109163 0.2705247920129084 0.341194092940616 0.014997388869862049 0.0037501355709609265 2.262582908150194e-11 10.64539549791616 -0.08691588463821065 SLGSVQAPS(ph)YGAR ddPTM_A549_MK2206_60min_R1 2 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 SLGS(0.036)VQAPS(0.964)YGAR;SLGS(0.009)VQAPS(0.991)YGAR 171.36 1.0564e-21 5045900000.0 8324.6 8316.6 7356.5 7168.3 9711.8 7780.7 7412.6 6662.299999999999 11593.5 10238.5 11435.0 True False 9729.588963070471 8739.879416929318 8399.762318861465 8924.533821797213 8283.207085143664 8604.048509589342 8759.373469751457 7606.701427438044 8967.590761015197 7925.615739052933 8595.37391005515 1.131956452957617 1.016812009388576 0.9772422243359475 1.0382950078945374 0.9636819958994101 1.0010092172399905 1.0190799796975039 0.884976210114545 1.0433043233319512 0.9220792279648578 1.0 13.06934468485978 -5.267496721029408 4.486954576576082 1.0054193660486972 1.1398376683351419 0.37120603473765834 0.04931291153483267 0.14043000488200785 7.08362744419023 0.005815728456499357 0.058973774798132685 5.401361928362654e-06 5.267496721029408 0.1344183022864447 SLGSVQAPS(ph)YGAR ddPTM_A549_PD325901_60min_R1 2 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 SLGSVQAPS(1)YGAR;SLGSVQAPS(1)YGAR 175.0 6.5241999999999995e-22 3335300000.0 13873.3 15917.3 15903.5 15376.0 17556.0 15887.6 13914.2 17434.800000000003 16525.7 16894.7 19546.6 True False 15281.707203016338 17258.706732769217 16982.807145514416 16325.740598570343 16322.927124912063 15758.216653116984 14443.712495142388 17087.049236664003 15831.182298669775 15827.965758732464 17142.492116106394 0.8914519020637766 1.0067793303258183 0.9906848450324242 0.9523551469643865 0.9521910241729497 0.9192488785403145 0.842567836538286 0.9967657631651877 0.9235052984971441 0.9233176630054358 1.0 14.065289238252756 -10.89773817816057 1.0719499507867438 1.0009928262019545 0.9421539151925076 0.0 0.05097266896683764 0.7672886911729824 1.520801388271736 0.034840296682560834 0.007753621482253195 1.2654990452398916e-11 10.89773817816057 -0.05883891100944694 SLGSVQAPS(ph)YGARPVSSAASVYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 1 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 SLGSVQAPS(1)YGARPVSSAASVYAGAGGSGSR 276.62 1.8289999999999995e-168 81163000.0 3681.4 3478.6 3451.2 4016.7 4228.4 4351.6 3596.7 3846.3 4800.0 4998.6 4297.3 True False 4055.133017896557 3771.75383014776 3685.419185751524 4264.80243641243 3931.411771188091 4316.162012368384 3733.5743866897606 3769.5825291360206 4598.272692449637 4682.98754293359 3768.759342829137 1.0759861930723453 1.0007945551960808 0.9778865803049522 1.1316197317101502 1.0431580829559823 1.1452474461073767 0.9906640480490421 1.0002184236858875 1.220102499035611 1.2425806789292517 1.0 11.879873958148854 -6.260303504169764 24.993709464717618 1.0906045744776691 1.0164796550982753 0.14341015032877513 0.08443886339998351 178.68434898180215 3931700.747085645 0.012711370523619215 0.03172660068310483 5.491569645799336e-07 6.260303504169764 -0.0741249193793938 SLGSVQAPSYGAR ddPTM_A549_PD325901_60min_R1 1 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 130.4 1.1911e-07 41083000.0 7888.7 6747.4 6639.2 6623.9 7839.0 7370.5 7114.0 6946.0 7313.6 7806.7 8197.4 False True 8689.555016646002 7316.0270780023575 7089.7760367528745 7033.04325903162 7288.415683081888 7310.477091681488 7384.727162930168 6807.456580968416 7006.234825729091 7313.783629700241 7189.171767600013 1.2087004313637184 1.0176453302971635 0.9861742445360546 0.9782828240003907 1.0138046382379047 1.0168733378479244 1.0272013803052362 0.9469041498838711 0.9745538223616554 1.0173332709425342 1.0 12.811609858441777 -5.256972850631882 3.325755653540089 0.9906689704589147 1.2392606816794358 0.8766152177673225 0.02279321829938122 0.07505968815871858 1.3355152013997966 0.0030869621111324626 0.047770683497218226 5.533847022764927e-06 5.256972850631882 0.24859171122052115 SLGSVQAPSYGARPVS(ph)S(ph)AASVYAGAGGSGSR ddPTM_A549_MK2206_60min_R1 1 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 SLGS(0.001)VQAPS(0.019)Y(0.017)GARPVS(0.75)S(0.587)AAS(0.461)VY(0.134)AGAGGS(0.014)GS(0.016)R 44.61600000000001 0.0088395 8893100.0 797.49 1235.2 1111.0 859.1 1072.1 1153.4 958.6 798.66 1785.7 1825.8 1794.7 True False 932.0868152414612 1298.066404034231 1268.556505981797 1069.5795385664644 914.3955102022819 1275.4520224350445 1132.7652116806173 911.8725007936698 1381.2418011769403 1413.350511926829 1349.0264587998222 0.6909329384619362 0.9622245698494836 0.9403496111635822 0.7928528989105439 0.677818810919235 0.9454610872271296 0.8396908780339236 0.675948566349787 1.023880437753444 1.047681832114867 1.0 10.39770292917136 -8.793618260007515 24.931618350815835 1.011276936740909 0.8244745050890941 0.45651069790720944 0.10058190340691381 126.0276838936964 97643.40780095157 0.01690590356420275 0.017998398680066904 1.6083543573628768e-09 8.793618260007515 -0.18680243165181476 SLGSVQAPSYGARPVS(ph)SAAS(ph)VYAGAGGSGSR ddPTM_A549_MK2206_60min_R1 1 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 S(0.001)LGS(0.002)VQAPS(0.063)Y(0.019)GARPVS(0.818)S(0.153)AAS(0.729)VY(0.053)AGAGGS(0.084)GS(0.078)R 40.777 0.020415 8463100.0 1190.1 1441.9 1124.1 1057.2 1648.0 1630.5 1458.5 1199.1 2185.5 2228.1 1751.1 True False 1390.9597848485396 1515.286551147148 1283.514282965021 1316.214047459511 1405.5813830923994 1803.0384277616945 1723.4905708702065 1369.076097089737 1690.4877395263486 1724.7706625173435 1316.2535420986073 1.0567567268467306 1.1512117557011141 0.9751269355891817 0.999969994656931 1.0678652236341712 1.3698260784065717 1.3093910221296035 1.0401309879150717 1.2843177134635246 1.3103635487790635 1.0 10.362221698276779 -7.025648641419508 24.944807877013798 1.1612595276251318 1.0464605915052076 0.2642101430332213 0.12128992809963485 1143.9037749025222 1112512.4109446264 0.020469065837371198 0.035544755362032096 9.426519246495295e-08 7.025648641419508 -0.1147989361199242 SLGSVQAPSYGARPVS(ph)SAAS(ph)VYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 2 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 2 S(0.001)LGS(0.035)VQAPS(0.115)Y(0.004)GARPVS(0.798)S(0.052)AAS(0.973)VY(0.001)AGAGGS(0.011)GS(0.012)R;SLGS(0.002)VQAPS(0.035)Y(0.004)GARPVS(0.908)S(0.055)AAS(0.993)VY(0.001)AGAGGS(0.001)GS(0.001)R 83.05799999999999 1.4907e-06 36338000.0 2878.1000000000004 2913.3999999999996 3070.7 3662.6 3071.2 3438.9 3162.1000000000004 3716.6 3416.4 4045.1 4043.8 True False 3170.2825932547644 3158.92244257819 3279.096167619149 3888.830483631878 2855.4895070648176 3410.8947385636607 3282.435445867514 3642.469497383703 3272.820588851027 3789.6916956589134 3546.4382357602362 0.8939342468416521 0.890730990526055 0.9246167421032844 1.0965453858519671 0.8051710807400252 0.9617803869161365 0.9255583285701494 1.0270782275735535 0.9228471980280929 1.0685909196009251 1.0 11.792155106711782 SLGSVQAPSYGARPVS(ph)SAASVYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 2 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 SLGSVQAPS(0.008)YGARPVS(0.964)S(0.028)AASVYAGAGGSGSR;SLGSVQAPS(0.024)Y(0.001)GARPVS(0.338)S(0.338)AAS(0.297)VYAGAGGS(0.001)GS(0.001)R 177.42 1.3429000000000001e-58 90150900.0 2772.02 2702.8 2810.3 3282.8999999999996 3378.9 3686.7 3337.8999999999996 3265.3 3217.2 3852.2999999999997 3581.1000000000004 True False 3053.4334297467326 2930.5744414774267 3001.0238577067416 3485.6772769931467 3141.5777205721893 3656.6767375214886 3464.925611068963 3200.171029921703 3081.992272114369 3609.0651205623685 3140.6474024632726 0.9722305749291893 0.9331115741228763 0.955543069035059 1.1098594749156687 1.000296218578433 1.1643066759590663 1.1032520264297585 1.0189526616110247 0.9813238728095044 1.1491468662581181 1.0 11.616846266724963 -6.044955020539444 24.895967275599904 1.020793816800162 0.9505849747367654 0.16950657436228334 0.07070434360986758 526.3695134456987 291501.38029533 0.009316448800888288 0.024650281355330834 9.016645172945327e-07 6.044955020539444 -0.07020884206339661 SLGSVQAPSYGARPVSS(ph)AASVYAGAGGSGSR ddPTM_A549_MK2206_60min_R1 2 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 SLGSVQAPSYGARPVS(0.05)S(0.95)AAS(0.001)VYAGAGGSGSR;SLGSVQAPSYGARPVS(0.037)S(0.963)AASVYAGAGGSGSR 184.5 1.9126999999999995e-67 609940000.0 5984.2 6354.700000000001 6309.3 5650.700000000001 8826.0 6442.6 4167.0 5782.1 11756.5 11581.8 11514.8 True False 6994.186660356807 6678.127086881742 7204.053612233082 7035.121753669563 7527.707091731506 7124.351655748238 4924.089961478333 6601.730381938602 9093.67152127272 8965.463336090566 8655.357367687193 0.8080760115657397 0.7715599487333717 0.8323230695393095 0.8128054631150863 0.869716497187567 0.8231146737332168 0.5689066034247531 0.7627334264191863 1.0506407921666958 1.0358282108097678 1.0 13.079377672358715 -8.760210932179449 24.99901108846444 1.0239137176389386 0.7808710948518512 0.6872935427446369 0.07438110807360866 13.838938951666298 281623.00259420683 0.013415198084173333 0.01480244965980765 1.736957002430459e-09 8.760210932179449 -0.24304262278708733 SLGSVQAPSYGARPVSSAAS(ph)VYAGAGGSGSR ddPTM_A549_MK2206_60min_R1 2 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 SLGSVQAPSYGARPVSS(0.001)AAS(0.999)VYAGAGGSGSR;SLGSVQAPSYGARPVSS(0.002)AAS(0.998)VYAGAGGSGSR 149.68 5.1579999999999996e-37 14100700.0 1636.13 2134.83 1719.6599999999999 1911.35 2438.8999999999996 1926.5900000000001 2038.51 1302.22 4593.6 3613.2 4069.6 True False 1912.2687444620137 2243.483728403819 1963.5336463336237 2379.630835803762 2080.141040791292 2130.460475033061 2408.880880099162 1486.8136728814925 3553.156934471854 2796.975610523616 3059.0060047538655 0.6251274896127179 0.7334028520759098 0.6418861693249974 0.7779098282597953 0.6800055434865565 0.6964551464502544 0.7874717723193831 0.48604470555824386 1.1615397056919963 0.9143413272732909 1.0 11.578847223536012 -8.772053016319806 24.999999978086993 1.0762826616782097 0.6867347218622711 0.7052157941093161 0.09824593055107275 62.59914608462184 147449.3458868669 0.015466476820208857 0.016548472512253037 1.6902345843586897e-09 8.772053016319806 -0.3895479398159386 SLGSVQAPSYGARPVSSAAS(ph)VYAGAGGSGSR ddPTM_A549_PD325901_60min_R1 4 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 SLGSVQAPSYGARPVS(0.004)S(0.049)AAS(0.946)VYAGAGGS(0.001)GSR;SLGSVQAPSYGARPVSS(0.002)AAS(0.998)VYAGAGGSGSR;SLGSVQAPSYGARPVSS(0.002)AAS(0.997)VYAGAGGSGSR;SLGSVQAPSYGARPVSS(0.001)AAS(0.999)VYAGAGGSGSR 215.56 4.3244999999999987e-91 995283100.0 6435.199999999999 7273.96 8004.400000000001 8368.1 7506.969999999999 15836.599999999999 10664.300000000001 10506.6 11082.7 12059.300000000001 11917.8 True False 7088.496766656148 7886.962137164844 8547.626718367383 8884.978531666009 6979.706324840568 15707.631980207992 11070.135772228876 10297.037620731751 10616.932660127408 11297.873739946994 10451.986153158745 0.6781961497828716 0.7545897996412182 0.8177992769139063 0.8500756125648747 0.667787559470809 1.5028370445612305 1.0591418329504116 0.9851752068787265 1.0157813552899526 1.0809307986437209 1.0 13.351489498031995 SLGVLPFTLNSGS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 SLGVLPFTLNSGSPEK 16 0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 1 SLGVLPFTLNS(0.01)GS(0.99)PEK 143.28 2.7913e-14 46631000.0 1696.3 1732.8 1792.6 1990.7 2921.2 2154.4 2305.7 2160.9 3278.4 2769.6 2654.6 True False 1982.5939694467527 1820.9921186127879 2046.8176351241855 2478.42158936592 2491.4953496902417 2382.3771780250204 2724.6158445357823 2467.2141924787056 2535.847634529024 2143.9454364292615 1995.3895567671525 0.9935874239308284 0.9125998041019538 1.0257734526988076 1.2420740506336798 1.248626034570843 1.1939408873547726 1.3654556000333549 1.236457404576169 1.2708534160304514 1.0744495625720287 1.0 10.962454713692276 -6.076964611765628 4.589818227620671 1.1743137636797973 0.9553523089034616 0.509488453885701 0.09732665778741684 0.1867223687765516 7.1943675916025205 0.017967542082138705 0.05090579475649382 8.375975304960027e-07 6.076964611765628 -0.21896145477633577 SLGVSNFNR ddPTM_A549_MK2206_60min_R1 2 SLGVSNFNR 9 0 P51857-2;P51857 P51857-2 AKR1D1 3-oxo-5-beta-steroid 4-dehydrogenase 0 ; 123.5 0.00027551 33796000.0 5634.2 6575.8 6382.6 5230.2 7947.8 6127.700000000001 6059.5 6221.9 8345.0 8881.9 9490.8 False True 6585.115217035244 6910.480132487284 7287.7486544369185 6511.599234792602 6778.689148386996 6776.129146761938 7160.4327145615525 7103.873378769613 6454.870824226664 6875.4726212525475 7133.972427245418 0.9230642933081675 0.968672111220308 1.0215554838149097 0.9127592377458729 0.9501983947258393 0.9498395481433545 1.003709053768568 0.9957808852244994 0.904807369254023 0.9637649558322329 1.0 12.800489924471133 SLGVSNFNR ddPTM_A549_PD325901_60min_R1 2 SLGVSNFNR 9 0 P51857-2;P51857 P51857-2 AKR1D1 3-oxo-5-beta-steroid 4-dehydrogenase 0 ; 169.21 5.612e-07 52407000.0 7902.6 7412.2 8013.9 8299.1 9422.5 8479.7 7478.4 8608.9 8440.2 8645.6 9064.7 False True 8704.866134413356 8036.852107118164 8557.771445495524 8811.716558376373 8760.696105860323 8410.644134635575 7762.994604337504 8437.188735948605 8085.487745586126 8099.715340532679 7949.799365867695 1.0949793490119417 1.0109503066988368 1.0764764054597584 1.1084199931144554 1.1020021641645696 1.05796935841507 0.9765019526993054 1.061308386243495 1.0170681514682 1.0188578312188161 1.0 12.956702735308106 -7.583744845512037 6.828828162982174 1.0110489575138593 1.0767247737141592 0.4989438028722808 0.030524273315843623 0.1300659274648665 11.665653448431941 0.004665809384605074 0.006945217994101149 2.607685153970397e-08 7.583744845512037 0.06567581620029994 SLHLLK ddPTM_A549_PD325901_60min_R1 2 SLHLLK 6 0 Q16236-3;Q16236-2;Q16236 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 0 ; 98.03 0.036896 7110700.0 2223.74 1679.9299999999998 2054.05 1961.75 2787.0 3690.7999999999997 2129.51 2397.4 4307.6 1710.82 1882.69 False True 2449.4924477691357 1821.5035968148484 2193.450185006062 2082.9228420424943 2591.250734628043 3660.7433484808407 2210.549668362584 2349.581976276082 4126.5665520825105 1602.7985332296325 1651.1310653552198 1.4835239304531882 1.1031853467204769 1.328453101652575 1.2615127204298466 1.5693791904221537 2.2171125147435093 1.3388093257678562 1.4230136090199474 2.499236213688907 0.9707276223313083 1.0 10.689238929342704 -6.872656752758861 4.630861808817304 1.7081859095021832 1.284061301189602 0.03827047145187301 0.4499042177270335 0.3872218691324666 14.078250463446377 0.08127614261322104 0.1575970253509521 1.3407359274411928e-07 6.872656752758861 -0.42412460831258114 SLIGS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 SLIGSPGR 8 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.001)LIGS(0.999)PGR;S(0.001)LIGS(0.999)PGR 121.64 0.0011763 419180000.0 8174.4 9009.599999999999 8556.1 7851.5 12053.9 8847.2 8505.4 8787.8 12820.599999999999 13469.3 13530.6 True False 9554.038875107892 9468.15015688699 9769.483637111474 9775.117852467229 10280.787277704772 9783.404831703934 10050.721084319135 10033.497561508799 9916.754570291238 10426.57577516488 10170.57859443745 0.9393800742401461 0.9309352529919355 0.9605632114631764 0.9611171834229266 1.0108360288693505 0.9619319826164786 0.9882152712350242 0.9865218058485263 0.9750433053744814 1.0251703655156297 1.0 13.31211413461325 -6.200490097532096 1.59048766139445 0.987039505625415 0.9348825037356695 0.5975677880683479 0.01763062484516509 0.17823521245291057 0.8359988310802955 0.002033182651076543 0.00815425078952865 6.302457162329021e-07 6.200490097532096 -0.05215700188974548 SLIGS(ph)PGR ddPTM_A549_PD325901_60min_R1 4 SLIGSPGR 8 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SLIGS(1)PGR;SLIGS(1)PGR;SLIGS(1)PGR;SLIGS(1)PGR 131.11 0.001072 613667000.0 16583.5 14405.599999999999 16098.100000000002 15297.400000000001 18016.7 17911.0 17339.1 17094.8 18047.1 16641.9 17104.9 True False 18267.044711872542 15619.610468457586 17190.613871739293 16242.285655083908 16751.26914624079 17765.138754373118 17998.94893881959 16753.830803388828 17288.64314748079 15591.127593875575 15001.10573689482 1.2177132160961464 1.041230609423782 1.1459564496942005 1.0827392286914184 1.1166689602781406 1.1842552853074177 1.1998414819883347 1.1168397248332986 1.152491253025424 1.0393318910838427 1.0 13.872781225759962 -10.699302192738811 0.8472592587769896 0.995582104934947 1.1377918331605201 0.4574379166110083 0.0497868880388508 0.4094189167418229 0.49663414674500406 0.03773657019859359 0.008740994599794213 1.9984708007820597e-11 10.699302192738811 0.1422097282255731 SLIKT(ph)PERLSLEGER ddPTM_A549_PD325901_60min_R1 2 SLIKTPERLSLEGER 15 2 A0A494C1F2;P35658-2;P35658;P35658-5;A0A494BZU9;H0YDS4;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 S(0.207)LIKT(0.793)PERLSLEGER;S(0.113)LIKT(0.885)PERLS(0.003)LEGER 85.146 4.572e-05 13745600.0 2061.02 1709.4499999999998 1893.1399999999999 2313.02 2038.8000000000002 2980.3 2304.52 2454.3 2562.8 2226.88 2837.9 True False 2270.2532331572665 1853.5113508152963 2021.6198647756266 2455.889992150442 1895.6017214781675 2956.029424915314 2392.2197696817325 2405.3470611388984 2455.094428377067 2086.274416758282 2488.8562909303055 0.9121672639076611 0.7447241359694879 0.8122686199852739 0.9867544386150392 0.7616356671078078 1.1877059497920568 0.9611723177426 0.9664467449986065 0.9864347882695071 0.8382462355745164 1.0 11.281267214720796 -7.233385271563181 24.99969769518361 1.0006129452506518 0.844244313193887 0.350991668899059 0.0986106357238424 492.921859944335 439254.9394088007 0.011639474535538185 0.02015759971206247 5.842715348805063e-08 7.233385271563181 -0.15636863205676477 SLIPDIKPLAGQEAVVDLHADDS(ph)RISEDETER ddPTM_A549_MK2206_60min_R1 2 SLIPDIKPLAGQEAVVDLHADDSRISEDETER 32 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.542)RIS(0.426)EDET(0.032)ER;SLIPDIKPLAGQEAVVDLHADDS(0.496)RIS(0.388)EDET(0.117)ER 109.05 4.384399999999999e-15 8547500.0 1044.21 1653.32 1336.1999999999998 1237.75 2117.4300000000003 1408.1 1333.73 1560.3400000000001 2301.1000000000004 2337.3 2021.6799999999998 True False 1220.4471195165909 1737.4669260993164 1525.6932522888185 1540.9988055647088 1805.958851942561 1557.1042073788667 1576.051476919246 1781.5229733408396 1779.9045241016156 1809.302306674652 1519.641060470511 0.8031153877473646 1.1433403395676622 1.003982645623193 1.0140544669723421 1.1884114603901268 1.024652628757449 1.0371208819741085 1.1723314272577268 1.1712664065226837 1.1906116212169577 1.0 10.569514883705061 -5.253587454169972 24.520851866690514 1.0824223501356462 0.8031152093839756 0.535764967511541 0.07724605933711916 471.4024268347877 1472101.5674553374 0.010900491626812866 0.161690969544936 5.577152833335101e-06 5.253587454169972 -0.2793071407516706 SLIPDIKPLAGQEAVVDLHADDS(ph)RISEDETERNGDDGTHDK ddPTM_A549_MK2206_60min_R1 2 SLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDK 41 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.333)RIS(0.333)EDET(0.333)ERNGDDGT(0.002)HDK;SLIPDIKPLAGQEAVVDLHADDS(0.456)RIS(0.456)EDET(0.088)ERNGDDGT(0.001)HDK 163.16 7.637899999999999e-53 16743600.0 4014.8 4540.8 4349.9 3801.8999999999996 5716.1 4355.3 4351.1 4542.1 7621.8 6639.3 6154.700000000001 True False 4692.400087564003 4771.907324675061 4966.781228956095 4733.3656706737775 4875.269262071885 4816.174955185843 5141.638548449338 5185.956584597865 5895.474469513575 5139.47751880589 4626.318128921418 1.0142839201285085 1.0314697761149396 1.0735926692775997 1.0231388198496667 1.053811935585266 1.041038428610764 1.1113888853225191 1.1209684332294116 1.2743339963281013 1.1109217687984874 1.0 12.175648761020243 -7.840693405060217 3.075397934963575 1.1321094411540464 1.0398890332003035 0.3213566063092299 0.06078082255675378 0.3623322624444566 6.942255232765468 0.015520957431095337 0.02229785900748405 1.4431337880769504e-08 7.840693405060217 -0.09222040795374298 SLIPDIKPLAGQEAVVDLHADDSRIS(ph)EDETER ddPTM_A549_PD325901_60min_R1 4 SLIPDIKPLAGQEAVVDLHADDSRISEDETER 32 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.252)RIS(0.722)EDET(0.026)ER;SLIPDIKPLAGQEAVVDLHADDS(0.066)RIS(0.925)EDET(0.009)ER;SLIPDIKPLAGQEAVVDLHADDS(0.232)RIS(0.763)EDET(0.004)ER;SLIPDIKPLAGQEAVVDLHADDS(0.104)RIS(0.896)EDET(0.001)ER 233.87 2.015099999999999e-116 111854000.0 11384.300000000001 12567.599999999999 13343.500000000002 13312.8 16764.9 14561.5 13496.2 14410.800000000001 16389.0 15759.899999999998 16346.5 True False 12540.025755321289 13626.715757996035 14249.070150983844 14135.101420437526 15587.391259765218 14442.91597184993 14009.805276404022 14123.36528894611 15700.227324282736 14764.817224398641 14335.9841290011 0.8747237470745616 0.9505253099736456 0.9939373553126755 0.9859875187670446 1.0872913306476513 1.0074589816706416 0.9772475436871312 0.9851688702957705 1.0951621585937603 1.0299130559533773 1.0 13.807353324887956 -3.7327515391821153 0.5751647657622097 1.0370307961570517 3.153482972151484e-07 0.5679156991253225 0.0379808331731871 9.880641305398688 0.5672314399738143 0.007993403924529678 10.170685100675875 0.00018503268922693566 3.7327515391821153 -1.0370304808087545 SLIPDIKPLAGQEAVVDLHADDSRIS(ph)EDETERNGDDGTHDK ddPTM_A549_PD325901_60min_R1 1 SLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDK 41 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.009)RIS(0.991)EDETERNGDDGTHDK 359.44 0.0 116360000.0 10479.0 11116.0 12728.0 13492.0 13217.0 14592.0 12957.0 13394.0 15472.0 15837.0 16032.0 True False 11542.820365767917 12052.7843316054 13591.798619681671 14325.370197444787 12288.68351617468 14473.167589962177 13450.085725342447 13126.846162610267 14821.76564532933 14837.049117240664 14060.165635221343 0.8209590601729922 0.85722918522472 0.9666883714110457 1.0188621221900185 0.8740070234585985 1.029373903939385 0.956609336923413 0.933619596182205 1.0541672146592742 1.0552542197705832 1.0 13.779325969671483 -3.2119548490669025 0.35038539890588155 1.0196295923978573 6.417628670114074e-18 0.5587614678888682 0.05139676892685257 11.948513478724168 0.32234170328988837 0.013777766873984102 7.036510285512931 0.0006138258175523727 3.2119548490669025 -1.0196295923978573 SLIPDIKPLAGQEAVVDLHADDSRISEDETER ddPTM_A549_MK2206_60min_R1 1 SLIPDIKPLAGQEAVVDLHADDSRISEDETER 32 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 0 115.27 1.683e-21 3206800.0 818.4 610.44 491.73 639.23 1004.8 959.27 905.21 663.97 1036.8 1076.5 1164.1 False True 956.5259120410428 641.5087885999479 561.4647080885951 795.8413786961252 856.9952510505112 1060.7793146881083 1069.674939771971 758.0897808228451 801.966455429384 833.3179023382797 875.0218424744381 1.0931451829089462 0.733134600144211 0.641657934504643 0.9095103002750173 0.9793986954966173 1.2122889546258346 1.2224551295166317 0.866366693977689 0.9165102132325477 0.9523395438698701 1.0 9.773175220018256 -6.529727716476977 5.384594451763147 0.9919213229866801 0.8073506491438709 0.24625394547826152 0.1476639962481349 0.19619918001252726 18.232383156694873 0.021649153989041162 0.04760907139700711 2.953060085085513e-07 6.529727716476977 -0.18457067384280923 SLIVGLK ddPTM_A549_MK2206_60min_R1 1 SLIVGLK 7 0 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 93.262 0.033714 1527300.0 910.5 1109.7 1055.8 749.61 1481.0 1156.3 1195.0 1242.8 1382.1 1297.5 1558.9 False True 1064.1701404122305 1166.1789900880724 1205.5283159456178 933.2644836512716 1263.1468618688364 1278.6588985101796 1412.1160316694536 1418.9707059153754 1069.0565567601766 1004.393848847114 1171.7821065487512 0.9081638424625973 0.9952182949121986 1.0287990482260045 0.7964488264802188 1.0779707718777014 1.0912087591747006 1.2051012076200391 1.2109509933503495 0.9123339149706492 0.8571506965619694 1.0 10.194488609518777 -4.286932054880881 15.058895928594218 0.9966072624782443 0.9149492766752128 0.0 0.12808659849515916 0.0 0.0 0.016757775405629526 0.0 5.164971686330501e-05 4.286932054880881 -0.08165798580303152 SLIVGLK ddPTM_A549_PD325901_60min_R1 2 SLIVGLK 7 0 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 ; 108.24 0.024978 6622200.0 3677.5 3745.1 3820.8 3831.3 4604.5 4033.7 4190.200000000001 4171.5 4911.2 4123.9 4030.0 False True 4050.8370927675874 4060.712720429593 4080.102464336874 4067.950699486378 4281.095804662656 4000.8508845689744 4349.6603539654225 4088.2961600215563 4704.799343158051 3863.516250210824 3534.335548274826 1.14613823091723 1.1489324273162749 1.1544185345753168 1.150980331075814 1.2112873116284437 1.1319952024707622 1.2306868701497715 1.1567368474725408 1.331169403384619 1.0931379314272176 1.0 11.787223299891604 -4.957043054258321 17.365399534189727 1.164353636411756 1.0447062369405427 0.0012038182605287329 0.07870232255829053 19572.03069310086 34040.021076148216 0.015084948675329496 79728.01464136488 1.1039691712861333e-05 4.957043054258321 -0.11964739947121328 SLIYTDT(ph)LVR ddPTM_A549_MK2206_60min_R1 2 SLIYTDTLVR 10 0 Q5SYE7-2 Q5SYE7-2 NHSL1 NHS-like protein 1 1 SLIYT(0.015)DT(0.985)LVR;SLIYT(0.02)DT(0.98)LVR 72.652 0.0021526 1759180.0 1515.5 1253.74 1621.54 1370.26 2363.2 1774.65 1592.15 1497.68 2233.8999999999996 1984.3400000000001 2461.2 True False 1771.279349582356 1317.550010843489 1851.4987549142413 1705.9737615133088 2015.5764105121111 1962.4422850826697 1881.4230458765867 1709.980726452638 1727.9252168052662 1536.076215816017 1850.0161143356138 0.9574399573370559 0.7121829916149965 1.0008014203590654 0.9221399469409302 1.089491272477891 1.0607703737691123 1.0169765718782682 0.9243058550691241 0.9340054950958125 0.8303042356837307 1.0 10.853322121874392 -5.791825052894592 24.99983659322944 0.981154009238869 0.8348112892230632 0.28138602486901476 0.08627056661496604 129.6370471405604 106658.92196561012 0.009779589481191772 0.03041102873419461 1.615009000848245e-06 5.791825052894592 -0.14634272001580573 SLKEFYGEDAK ddPTM_A549_PD325901_60min_R1 1 SLKEFYGEDAK 11 1 P30838;C9JMC5;E9PNN6;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 54.343 0.019316 4110400.0 2604.1 2868.5 3243.6 2727.7 3697.2 3138.8 3445.2 3196.5 3610.0 3377.9 4137.2 False True 2868.4663149629027 3110.238562001626 3463.7302013513104 2896.1838339438305 3437.5214266475778 3113.2386534658217 3576.308971285778 3132.74329989426 3458.2842541131654 3164.6188175239795 3628.3506278716172 0.7905703194527093 0.8572045210046543 0.9546294050922877 0.798209470632866 0.9474060748820244 0.8580313681790012 0.9856569383934191 0.8634069915486422 0.9531284621579661 0.8721921176014729 1.0 11.825098162978708 -2.0000000335238575 0.08513815029768353 1.0872737483029375 0.3806925139876611 0.10747456251711185 0.06582279586613599 80.23707675493672 0.4801186210548189 0.5477776589601832 6.650771989675589 0.009999999228084686 2.0000000335238575 -0.7065812343152764 SLKEFYGEDAKK ddPTM_A549_MK2206_60min_R1 1 SLKEFYGEDAKK 12 2 P30838;C9JMC5;E9PNN6;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 51.773999999999994 0.0087429 4473600.0 1813.7 2211.5 2128.1 2472.0 2895.8 1888.7 2242.0 2013.2 3341.4 2944.3 2829.5 False True 2119.808219292326 2324.0559039197733 2429.896579999877 3077.640110972297 2469.831656043063 2088.5609803824073 2649.3423790819347 2298.5772651664242 2584.5782351193516 2279.180585094842 2126.857059772719 0.9966857949160223 1.0927184284627607 1.142482316258499 1.4470366481991888 1.161258884180489 0.9819940511684391 1.245660758868793 1.0807389498060842 1.215210125778526 1.0716190703189057 1.0 11.054507361643513 -10.922132371177618 1.099222652249768 0.997256445624731 1.1593215355590634 0.10554560037694483 0.12300911689327748 0.7294019490874182 1.5210522284854002 0.09315084386499764 0.020503623680103212 1.196375825282822e-11 10.922132371177618 0.16206508993433233 SLKEFYGEDAKK ddPTM_A549_PD325901_60min_R1 1 SLKEFYGEDAKK 12 2 P30838;C9JMC5;E9PNN6;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 75.479 0.00041242 9705500.0 3938.2 3819.9 4498.2 4594.6 4783.1 5334.8 5355.5 5323.6 5058.1 5038.9 5410.6 False True 4338.003164850391 4141.816378940214 4803.474901873986 4878.398006906302 4447.151556799206 5291.355157547303 5559.306483142051 5217.416621716592 4845.525647016564 4720.742994055943 4745.130500619299 0.9142010244574363 0.872856158202531 1.0122956368106362 1.0280851087803824 0.937203214162139 1.1151126732671979 1.17158136797639 1.099530691734538 1.021157510079894 0.9948605193133945 1.0 12.212232049465339 -5.821212618214852 5.4089314384858165 1.0309133979840057 0.8934918534032426 0.44581738047234554 0.06306761303369907 0.14155085082912802 8.190622836238477 0.00943527255271956 0.03125292610406264 1.5093410428482983e-06 5.821212618214852 -0.13742154458076317 SLKES(ph)EQES(ph)EEEILAQK ddPTM_A549_MK2206_60min_R1 1 SLKESEQESEEEILAQK 17 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 S(0.108)LKES(0.892)EQES(1)EEEILAQK 116.24 4.2042000000000003e-10 9762900.0 2574.7 3021.7 2857.3 2360.7 3837.4 3681.2 2869.6 3761.3 4275.6 3302.7 4578.7 True False 3009.246414628634 3175.4916232757732 3262.5081048980987 2939.0716059758515 3272.9235433730405 4070.7421406172048 3390.969175295954 4294.475793498148 3307.183426730203 2556.617776175232 3441.6824243086594 0.8743533085372076 0.9226567799652937 0.9479399034190228 0.8539636269799736 0.9509661670862855 1.1827768047003657 0.9852649830052543 1.2477838638353715 0.9609205670376535 0.7428395363028845 1.0 11.748898265825048 -7.0064663449663245 24.85180705411197 1.0182167789612588 0.9045166930348816 0.17398599804470127 0.12284294566750613 310.52265916084207 1193426.1992789907 0.013666239852188667 0.02517481796321606 9.85220988146185e-08 7.0064663449663245 -0.11370008592637726 SLKES(ph)EQES(ph)EEEILAQK ddPTM_A549_PD325901_60min_R1 2 SLKESEQESEEEILAQK 17 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 S(0.004)LKES(0.996)EQES(1)EEEILAQK;S(0.019)LKES(0.981)EQES(1)EEEILAQK 147.87 5.133e-17 48091000.0 7737.5 8040.3 8346.0 8629.2 10116.900000000001 8537.2 8542.5 8969.7 8244.5 8822.5 10248.0 True False 8523.005303953554 8717.884298435303 8912.409748575054 9162.206085664886 9406.32384541028 8467.675873699638 8867.589512135368 8790.792296906477 7898.012336021052 8265.445844342732 8987.560967424422 0.9483112642957685 0.9699944545615249 0.9916383077542666 1.0194318702118925 1.0465936063748185 0.9421550412165083 0.9866513889893049 0.9781065551342419 0.8787714892446951 0.9196539388495933 1.0 13.133713936817921 -8.546366460759526 24.972747053395913 0.9419998223965065 0.987460696685588 0.2633898726914806 0.03848080474614342 329.44478693325067 350272.6888790165 0.008538094065274011 0.009681485722682123 2.8420619433790017e-09 8.546366460759526 0.04546087428908152 SLKES(ph)EQES(ph)EEEILAQKK ddPTM_A549_MK2206_60min_R1 1 SLKESEQESEEEILAQKK 18 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 S(0.416)LKES(0.586)EQES(0.999)EEEILAQKK 61.89 0.00094485 7988700.0 1189.8 1485.1 1330.0 1064.5 2011.3 1225.1 1516.4 830.85 1938.1 2160.3 2147.8 True False 1390.6091521828357 1560.685246625029 1518.6139990601177 1325.3025477872216 1715.4404343529993 1354.739268844436 1791.910251400468 948.625531871411 1499.1234445097311 1672.2867296064906 1614.4419837355886 0.8613559150420286 0.9667025897169906 0.9406432775901067 0.8209044122605511 1.06255935588575 0.8391377841337864 1.1099254537807814 0.587587253941716 0.9285706514154032 1.0358295599678704 1.0 10.65681988214489 -9.88816220716772 1.4762369843749452 0.9858103969080657 0.9051881958510561 0.09360059681799471 0.13125860061540442 0.743720402696856 3.247004304827198 0.03289450315565148 0.021864434735889813 1.2937125549889338e-10 9.88816220716772 -0.08062220105700957 SLKES(ph)EQES(ph)EEEILAQKK ddPTM_A549_PD325901_60min_R1 1 SLKESEQESEEEILAQKK 18 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 S(0.441)LKES(0.559)EQES(1)EEEILAQKK 74.062 0.00017315 22519000.0 2265.9 2371.1 2397.8 1931.8 3023.3 2813.8 2433.9 2847.5 2544.1 2341.7 3033.7 True False 2495.9324999325822 2570.920918376175 2560.529127142736 2051.122898563879 2810.9538378187867 2790.885345712417 2526.5233963811843 2790.7043786794648 2437.180324346065 2193.8446623629766 2660.5741322087683 0.9381180060788221 0.9663030573937947 0.9623972119946244 0.770932436624522 1.056521524354285 1.0489786065068092 0.9496158614019534 1.0489105884686116 0.9160354882961876 0.8245756567367961 1.0 11.377521886897469 SLKESEQES(ph)EEEILAQK ddPTM_A549_MK2206_60min_R1 2 SLKESEQESEEEILAQK 17 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 SLKES(0.001)EQES(0.999)EEEILAQK;SLKES(0.001)EQES(0.999)EEEILAQK 174.01 1.5236e-30 49273000.0 9063.5 9925.599999999999 8910.4 8652.3 12860.9 10163.4 8910.2 9002.0 14773.2 14839.6 14710.0 True False 10593.197218699896 10430.770644334649 10174.028704680655 10772.113888416501 10969.07864673121 11238.884242081096 10529.068004503071 10278.061067468781 11427.093787952721 11487.324053450197 11057.101024653368 0.9580447167011378 0.9433549192575679 0.9201352761448252 0.9742258720797208 0.9920392897084055 1.0164404048604074 0.952244895025109 0.929543923362226 1.033462004414575 1.0389092066571144 1.0 13.432685565702938 -7.1728301090973305 0.4199515423266673 1.0140743975563553 0.9337205043785286 0.35196879850206186 0.0315692717588309 1.255172679372589 0.3825939578060026 0.010637452776189752 0.04027304780736829 6.716915593910823e-08 7.1728301090973305 -0.08035389317782671 SLKESEQES(ph)EEEILAQK ddPTM_A549_PD325901_60min_R1 2 SLKESEQESEEEILAQK 17 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 SLKESEQES(1)EEEILAQK;SLKESEQES(1)EEEILAQK 261.54 1.0034e-89 94307000.0 29607.0 28984.0 31930.0 31039.0 37985.0 33206.0 34049.0 35205.0 35457.0 36693.0 37330.0 True False 32612.680844478575 31426.58339935686 34096.96181068791 32956.20853531639 35317.06464113606 32935.58134541421 35344.75332732772 34502.808657211775 33966.86559503889 34376.19771793342 32738.646654367076 0.9961523818862043 0.9599231065088881 1.0414896550447252 1.0066454146149104 1.0787576228788627 1.0060153583355549 1.0796033721391782 1.0538862226490164 1.0375158739345134 1.0500188990966708 1.0 14.998707064666707 -5.7648696728553634 24.996650301186243 1.0283231119567946 0.9780377399239141 0.3602271993719235 0.028574289459073532 73.04584720836233 532307.730494233 0.004085335797244631 0.013483179530857278 1.7184239905121141e-06 5.7648696728553634 -0.050285372032880526 SLKESEQES(ph)EEEILAQKK ddPTM_A549_MK2206_60min_R1 2 SLKESEQESEEEILAQKK 18 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 SLKESEQES(1)EEEILAQKK;SLKES(0.001)EQES(0.999)EEEILAQKK 162.01 1.4382999999999997e-23 49747000.0 5815.200000000001 7313.5 8041.8 6156.1 9682.0 6748.4 6281.8 5963.6 10021.5 10021.0 11863.9 True False 6796.66359201011 7685.725911515825 9182.248163640339 7664.344776357829 8257.790625667847 7462.511208774626 7423.121747063743 6808.958562759034 7751.6462510470365 7757.249140113238 8917.766203017341 0.7621486633850579 0.8618442933517753 1.029657871108295 0.8594467046876139 0.9259931733659724 0.8368139552985446 0.83239699024091 0.7635273685976665 0.8692363170974649 0.8698646010128142 1.0 13.122466661689002 -10.415304897248705 0.9309625946463892 0.9943982340146063 0.8644592965019016 0.03384659734412632 0.0789887100153897 0.48740968368652104 0.8040786377772616 0.038033734505732955 0.013408322788002199 3.8432187342552965e-11 10.415304897248705 -0.1299389375127047 SLKESEQES(ph)EEEILAQKK ddPTM_A549_PD325901_60min_R1 2 SLKESEQESEEEILAQKK 18 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 SLKESEQES(1)EEEILAQKK;SLKESEQES(1)EEEILAQKK 189.33 1.1085e-40 95118000.0 9621.3 8809.2 9227.9 9665.9 10874.8 11565.2 10291.3 11337.5 11075.0 10361.3 11327.5 True False 10598.047293173297 9551.582199890085 9854.160785870563 10262.940690148358 10110.991564023332 11471.016845629834 10682.941053115443 11111.364668403314 10609.556264349943 9707.085749729482 9934.289310938733 1.0668148431618247 0.9614761459959449 0.9919341462121563 1.0330825254754503 1.0177871056050312 1.154689227039019 1.0753603724176184 1.1184861161802981 1.0679733529269846 0.9771293593232607 1.0 13.278201046877026 -6.68063064136517 2.518712370125274 1.0517329044470451 1.004142570881069 0.14953255484258554 0.053180941725808874 0.4725655130242261 6.08163270218015 0.008123739181327765 0.018527217807444468 2.086264454336369e-07 6.68063064136517 -0.047590333565976195 SLKLS(ph)PVQK ddPTM_A549_MK2206_60min_R1 2 SLKLSPVQK 9 1 Q92834-2;Q92834;H7C4H4;A0A2R8Y838;A0A2R8Y414;Q92834-3;Q92834-6;A0A2R8YFT6;Q92834-4 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 S(0.049)LKLS(0.951)PVQK;S(0.012)LKLS(0.988)PVQK 65.563 0.0016074000000000001 85640000.0 5639.700000000001 5855.700000000001 6313.8 5772.7 7321.9 5955.6 5855.3 6030.0 8389.9 7979.3 8331.8 True False 6591.543482573159 6153.730118283073 7209.19177989907 7187.011759146351 6244.85820926228 6585.817638992675 6919.132217769159 6884.770966100511 6489.601045917231 6176.770588135476 6262.784114018144 1.0524941244292847 0.9825869782911769 1.1511161248178041 1.1475745656088459 0.9971377099338712 1.0515798595470467 1.104801329856141 1.099314752154742 1.036216629500512 0.9862659283288815 1.0 12.612588432963939 -9.191733407020136 1.7667810254911633 1.0116609216469632 1.0727202762210906 0.2428542522524465 0.05178663917554721 0.37212947416519926 2.3992805938403334 0.010997938652148634 0.010125922634163814 6.43082354226205e-10 9.191733407020136 0.06105935457412737 SLKLS(ph)PVQK ddPTM_A549_PD325901_60min_R1 2 SLKLSPVQK 9 1 Q92834-2;Q92834;H7C4H4;A0A2R8Y838;A0A2R8Y414;Q92834-3;Q92834-6;A0A2R8YFT6;Q92834-4 Q92834-2 RPGR X-linked retinitis pigmentosa GTPase regulator 1 S(0.007)LKLS(0.993)PVQK;S(0.002)LKLS(0.998)PVQK 110.31 0.00010235 171915000.0 21585.2 20752.9 21540.0 21012.3 24344.5 23139.1 25052.2 24039.4 24425.5 23153.9 23605.1 True False 23776.513613815623 22501.819715308888 23001.83393054236 22310.182048604307 22634.626303965684 22950.662841344147 26005.57518008985 23559.915308455536 23398.981176964277 21691.958802530706 20701.822345057586 1.1485227347384757 1.086948740079447 1.111101889831157 1.0776916967375438 1.093363952539644 1.1086300741453061 1.2561973891297786 1.138059969589117 1.1302860582489067 1.0478284684782597 1.0 14.337470150774386 -10.54613670714965 0.8818102397932351 1.0011711318529402 1.1266023483508087 0.4023026802031632 0.04769475583504238 0.398586085480365 0.5624479840416643 0.03111448734547334 0.00905724781132011 2.8435658693305704e-11 10.54613670714965 0.1254312164978686 SLKPGEELS(ph)PTDENGK ddPTM_A549_MK2206_60min_R1 2 SLKPGEELSPTDENGK 16 1 P42330-2 P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 1 S(0.001)LKPGEELS(0.975)PT(0.024)DENGK;S(0.001)LKPGEELS(0.821)PT(0.178)DENGK 60.474 0.0011689 3073900.0 1812.1799999999998 1557.27 2086.6 1870.18 2397.3 1828.71 2139.0 2187.3999999999996 2514.7 2293.7 2114.0299999999997 True False 2118.031680452757 1636.5283913620372 2382.511255969052 2328.3741839555705 2044.6603456841083 2022.222878400547 2527.628612335533 2497.470648631551 1945.124465150724 1775.551576956166 1589.0580067401736 1.3328850623884592 1.0298732861988125 1.499323023994942 1.4652543671027123 1.2867122137841693 1.2725922337781594 1.5906459056965219 1.5716673891313218 1.224073921090516 1.1173610840038302 1.0 10.633956074237718 -9.514242286713195 1.259726855000395 1.0523253993536512 1.3715386246074763 0.36582550197849184 0.15720681547269383 0.27971799559479854 0.9143834130990433 0.04173333742057327 0.03195865940098532 3.0602556842592616e-10 9.514242286713195 0.3192132252538251 SLKQPLEQNQTIS(ph)PLSTYEESK ddPTM_A549_MK2206_60min_R1 2 SLKQPLEQNQTISPLSTYEESK 22 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 SLKQPLEQNQT(0.094)IS(0.906)PLSTYEESK;SLKQPLEQNQT(0.052)IS(0.946)PLS(0.001)T(0.001)YEESK 147.17 1.4775999999999998e-27 18479600.0 3170.4 2836.6 3293.7 2684.1 3798.8 2535.3999999999996 2933.9 2531.71 3882.8 3689.5 3941.5 True False 3705.4860111619287 2980.970823901798 3760.7961869957217 3341.704620493829 3240.0015522399312 2803.69434513769 3466.9516529832717 2890.5876455367043 3003.3519995574948 2856.0393875309637 2962.7167701340077 1.2507054499827617 1.006161255085806 1.2693741855133913 1.1279190282987055 1.09359139047685 0.9463254717429082 1.1701934143460013 0.9756543975703621 1.0137155295548717 0.9639933915795067 1.0 11.532704998759515 -6.930877477049069 2.7936102111019387 1.01385156450647 1.1612381690977325 0.41377716223400773 0.08441933041602843 0.18978375255964383 3.006078879675903 0.011049446395603464 0.022129858072759752 1.1725261113951664e-07 6.930877477049069 0.1473866045912624 SLKQPLEQNQTIS(ph)PLSTYEESK ddPTM_A549_PD325901_60min_R1 2 SLKQPLEQNQTISPLSTYEESK 22 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 SLKQPLEQNQT(0.137)IS(0.862)PLS(0.002)TYEESK;SLKQPLEQNQT(0.217)IS(0.772)PLS(0.01)T(0.002)YEESK 158.94 3.0551999999999993e-33 20303200.0 3974.5 3644.5 4151.6 3938.5 4974.299999999999 4973.0 5069.6 4653.200000000001 4817.4 4883.8 5323.0 True False 4377.98831412774 3951.634805373864 4433.352541598871 4181.772200017515 4624.922328403401 4932.501536792897 5262.526402191567 4560.38827563522 4614.941430959763 4575.436034525476 4668.304745277146 0.937811165510753 0.8464817575098699 0.9496707656208663 0.8957796091285924 0.9907070298018494 1.0565937328283967 1.1272885317771053 0.976883156621019 0.9885690165425962 0.9801065449196256 1.0 12.18868302740176 -6.824156567638727 5.003858253471311 1.0084139053414287 0.9059728409603482 0.5441818949372548 0.04804086946931413 0.13257018502119491 6.526089800226354 0.007159470810430931 0.013940511355076051 1.4991442810995313e-07 6.824156567638727 -0.10244106438108047 SLLDGLAS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 SLLDGLASSPR 11 0 E9PI10;E9PK87;F8W6N5;Q3YBR2 E9PI10 TBRG1 Transforming growth factor beta regulator 1 1 SLLDGLAS(0.855)S(0.145)PR 63.073 0.0069193 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SLLDT(ph)PAKR ddPTM_A549_PD325901_60min_R1 2 SLLDTPAKR 9 1 A0A5H1ZRP3;O43151-3;O43151-2;O43151 A0A5H1ZRP3 TET3 Methylcytosine dioxygenase TET3 1 S(0.005)LLDT(0.995)PAKR;S(0.009)LLDT(0.991)PAKR 59.542 0.0056074 13163300.0 3728.9 3747.6 3316.1 3613.9 4364.8 3992.1 3905.6 4418.8 4420.2 4340.9 4301.5 True False 4107.455182928907 4063.4234042033436 3541.150487329227 3837.122395237603 4058.2315057425462 3959.589661176537 4054.2297452263247 4330.6635675184625 4234.4343656595565 4066.8148331773714 3772.442769455128 1.0888051678838764 1.0771332138168508 0.9386889884722339 1.0171452901303568 1.075756944174582 1.0496089412506686 1.074696156573343 1.1479732979869595 1.1224648389486784 1.0780322145920216 1.0 11.88128329890654 -6.7631823706898215 24.995314436195077 1.0677067610624689 1.0272242960588154 0.1481642777518346 0.05116494289219164 95.57521718698727 1370625.5611652753 0.009080716094037367 0.017807992202839924 1.7251133233269412e-07 6.7631823706898215 -0.04048246500365349 SLLGDSAPTLHLNKGT(ph)PS(ph)QSPVVGR ddPTM_A549_MK2206_60min_R1 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDSAPTLHLNKGT(0.998)PS(0.61)QS(0.392)PVVGR 149.16 1.1331e-31 21594000.0 1511.6 1946.1 1959.8 1511.1 2155.4 1743.2 2059.8 2009.4 2933.9 2673.2 3376.6 True False 1766.7211249282022 2045.148177534827 2237.7291092917426 1881.3195678358568 1838.343515241114 1927.6642669574892 2434.0389975169364 2294.238603529412 2269.376334475569 2069.3222633819696 2538.0970305808682 0.6960810022790463 0.80578013877853 0.8816562496744328 0.7412323268844054 0.7242999353812691 0.7594919515414761 0.9590015543889128 0.9039207626370191 0.8941251288396173 0.8153046311662817 1.0 11.309531508633068 -7.761122479151389 24.999849001861925 0.945157735013167 0.7717542333149652 0.5348220215256045 0.06513098174263898 3.910714669790023 308490.9960614276 0.00940527619486336 0.013474860216970605 1.7333151016019483e-08 7.761122479151389 -0.17340350169820185 SLLGDSAPTLHLNKGT(ph)PS(ph)QSPVVGR ddPTM_A549_PD325901_60min_R1 3 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDSAPT(0.004)LHLNKGT(0.979)PS(0.668)QS(0.349)PVVGR;SLLGDSAPT(0.008)LHLNKGT(0.99)PS(0.752)QS(0.25)PVVGR;SLLGDSAPT(0.001)LHLNKGT(0.994)PS(0.566)QS(0.439)PVVGR 131.94 5.6116e-23 128790000.0 6606.6 6579.900000000001 6890.4 8211.7 9159.2 8447.5 6962.3 9043.8 8616.2 7638.9 8504.7 True False 7277.297168478138 7134.411265161063 7358.023979341187 8718.918058876176 8515.889389524636 8378.706360759696 7227.254136416742 8863.414314276148 8254.091077642615 7156.578550337168 7458.675815735218 0.9756821918879443 0.9565251850884752 0.9865054013767847 1.1689632683166473 1.1417427972347403 1.123350386550322 0.9689728197020903 1.1883361783303974 1.106642959361412 0.9594971985830609 1.0 12.864703807415529 -6.029492759450369 22.387970984407943 1.0736472704149747 0.9674565215708213 0.300157411001975 0.07387511379346362 175.07032762667785 132896.96384430354 0.010202098248597108 0.027068174322526242 9.343449455092447e-07 6.029492759450369 -0.10619074884415336 SLLGDSAPTLHLNKGT(ph)PSQS(ph)PVVGR ddPTM_A549_MK2206_60min_R1 2 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDSAPTLHLNKGT(0.998)PS(0.059)QS(0.943)PVVGR;SLLGDSAPTLHLNKGT(0.993)PS(0.231)QS(0.776)PVVGR 106.17 2.8173e-11 27341900.0 3213.3 4342.1 3652.0 3453.9 5770.1 3491.6 3829.4 4337.1 6815.6 5932.3 6737.8 True False 3755.626482357628 4563.09434339138 4169.9085147124415 4300.105655051465 4921.325933605251 3861.0787944635017 4525.152411443519 4951.897206811694 5271.8774822767255 4592.189309838716 5064.618306180115 0.7415418606718722 0.9009749733406861 0.8233411212102794 0.8490483181732075 0.9717071724042834 0.7623632347085286 0.89348340543683 0.9777434166695498 1.0409229607379695 0.9067197234261631 1.0 12.306237829398068 -8.26681943128522 2.789565764248889 1.0188169049299975 0.8485992332992903 0.4475771497876275 0.06854834516898212 0.1218395627012534 1.8986539963644178 0.009341046621365302 0.011864976738147605 5.409792017289979e-09 8.26681943128522 -0.17021767163070722 SLLGDSAPTLHLNKGT(ph)PSQS(ph)PVVGR ddPTM_A549_PD325901_60min_R1 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDSAPT(0.001)LHLNKGT(0.996)PS(0.094)QS(0.909)PVVGR 79.365 2.1925e-06 13217000.0 1658.6 1692.1 1416.6 2339.4 2611.3 1928.2 2091.7 2481.7 2650.2 2293.9 1832.0 True False 1826.979851003215 1834.6992054254656 1512.7389947078136 2483.8994248371146 2427.8912964959486 1912.4973784926715 2171.3007881221574 2432.2005466440114 2538.8213103187563 2149.0627625205757 1606.6756140048342 1.1371180561141683 1.1419226067994241 0.9415335500967291 1.5459868832176356 1.511127246429125 1.190344436563358 1.351424499877686 1.5138093373941588 1.5801704390038234 1.3375834821839212 1.0 10.649862964573218 -6.249804025481763 24.886012596499953 1.3276401924105363 1.0803645392846348 0.3537715328280331 0.17396982361140026 982.7325475857485 2101890.4967030315 0.03346061361796327 0.08769721111724693 5.625951378529986e-07 6.249804025481763 -0.2472756531259015 SLLGDSAPTLHLNKGTPS(ph)QS(ph)PVVGR ddPTM_A549_MK2206_60min_R1 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDSAPT(0.002)LHLNKGT(0.416)PS(0.687)QS(0.894)PVVGR 63.726000000000006 8.5535e-05 3850100.0 922.22 1121.8 1382.2 1076.6 1872.4 1080.9 1129.7 1341.3 2010.0 1694.6 1679.9 True False 1077.868189885741 1178.8948284047924 1578.2167439856355 1340.367048330411 1596.9724403532816 1195.2801205566486 1334.9518669263437 1531.4333825589736 1554.7382093104382 1311.7886830491861 1262.734467118639 0.8535984547450156 0.9336046960805976 1.2498405524535 1.0614797356319237 1.2646937910844558 0.9465807354447918 1.057191279471838 1.2127913052484132 1.2312471464076733 1.038847609856157 1.0 10.302335579966156 -5.597220771980588 6.516368539875426 1.117852520516607 0.8727520288808264 0.4197175604451234 0.10344049314417061 0.14066795709394173 9.545399021956461 0.015398524758152073 0.0613972984889576 2.528012563990338e-06 5.597220771980588 -0.24510049163578063 SLLKNS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SLLKNSPR 8 1 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 SLLKNS(1)PR;SLLKNS(1)PR 75.229 0.0013602 80954000.0 7215.6 8501.0 8950.7 6691.0 10127.2 8651.099999999999 9231.599999999999 7928.5 11133.0 11365.0 11773.0 True False 8433.416875517289 8933.664589293227 10220.043850667218 8330.295300370404 8637.502295420722 9566.55365986458 10908.86222423407 9052.389155012914 8611.393275747814 8797.638606664701 8849.439181729711 0.9529888507430697 1.0095175983284235 1.1548803987225786 0.9413359569235624 0.9760508115874114 1.0810350196671674 1.2327179158150703 1.0229336536604723 0.973100452910806 0.9941464567413542 1.0 13.111370314391712 -8.526053053282316 24.34123323538208 0.987861614986474 1.0522875267906167 0.09475829993427398 0.08208828616547865 118.59697050125452 909416.9794104431 0.014066214084422522 0.01599263495564069 2.978152596987955e-09 8.526053053282316 0.0644259118041427 SLLKNS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SLLKNSPR 8 1 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 SLLKNS(1)PR 45.82899999999999 0.012768 89551000.0 6267.5 6252.5 6185.7 6219.7 6894.4 7014.0 6179.4 6766.7 7014.3 6183.2 6408.2 True False 6903.771986110357 6779.420118150658 6605.4987996358395 6603.876743036421 6410.161128388795 6956.880309484284 6414.560448497426 6631.732860126544 6719.513363885308 5792.791696768486 5620.032024926739 1.2284221790000125 1.206295638188829 1.1753489607066692 1.1750603401806252 1.14059156601912 1.2378720047551637 1.1413743587308196 1.1800169164005776 1.1956361341148944 1.0307399799637262 1.0 12.456362636117426 -10.767991299538206 0.6384984329395086 0.973683203358832 1.1885465688396775 0.8235840561242307 0.030456604182323137 0.29794027381021093 0.1733892793531267 0.0365691792667372 0.005910962567998371 1.7061165682385235e-11 10.767991299538206 0.2148633654808455 SLLLEPPRGT(ph)PDR ddPTM_A549_MK2206_60min_R1 2 SLLLEPPRGTPDR 13 1 Q53GT1-3;Q53GT1 Q53GT1-3 KLHL22 Kelch-like protein 22 1 SLLLEPPRGT(1)PDR;SLLLEPPRGT(1)PDR 85.734 0.00010974 25161000.0 3372.9 3615.3999999999996 3175.7 3219.7 4521.4 3529.7 3333.1 3441.3999999999996 4912.0 4618.1 4094.1000000000004 True False 3942.1630605122605 3799.408417378044 3626.0620126430185 4008.5266445378265 3856.3080494623646 3903.2105111747646 3938.681125654773 3929.228988845485 3799.4398428521718 3574.8680025902545 3077.4219785882647 1.2809952901943875 1.2346075526246105 1.1782791043516354 1.3025599584418048 1.253096935127306 1.2683377639894942 1.279863844821698 1.2767923983723475 1.2346177642479583 1.1616437483916937 1.0 11.58750656540735 -10.43099759953547 0.6626767388173788 0.9880833087824317 1.2595297586883083 0.5398656343661434 0.05583046565112537 0.19272943795263953 0.14515127689019136 0.028228846596773625 0.007164497071324807 3.706827706420961e-11 10.43099759953547 0.27144644990587663 SLLLEPPRGT(ph)PDR ddPTM_A549_PD325901_60min_R1 4 SLLLEPPRGTPDR 13 1 Q53GT1-3;Q53GT1 Q53GT1-3 KLHL22 Kelch-like protein 22 1 SLLLEPPRGT(1)PDR;S(0.001)LLLEPPRGT(0.999)PDR;S(0.001)LLLEPPRGT(0.999)PDR;SLLLEPPRGT(1)PDR 68.944 0.001416 38351800.0 5284.400000000001 5889.7 4748.16 6625.599999999999 7019.8 6604.599999999999 5674.6 6990.9 7413.900000000001 6433.3 6472.8 True False 5820.868397830332 6386.045688903945 5070.398690605576 7034.848264170635 6526.753464995314 6550.814327348148 5890.550008260269 6851.461015245044 7102.319565531737 6027.100340086152 5676.686634459879 1.0253989294556456 1.1249600515444973 0.8931968623785079 1.2392525283087044 1.149747006532855 1.1539855463540907 1.037673979131092 1.2069471958613656 1.2511382119311756 1.0617285624855728 1.0 12.470833388545673 -6.269983535015275 24.99026043287879 1.1327082171238414 1.0255627549335367 0.26362808006207417 0.09081124707720432 852.3409309514429 2492959.280467438 0.015315263571838742 0.03611787542699187 5.370521567209091e-07 6.269983535015275 -0.10714546219030474 SLLNART(ph)PENHENLFLQPPK ddPTM_A549_PD325901_60min_R1 1 SLLNARTPENHENLFLQPPK 20 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.213)LLNART(0.787)PENHENLFLQPPK 106.45 5.9338e-10 6815700.0 1486.8 1521.6 1452.0 1669.2 1665.7 1928.2 1356.1 1721.1 1538.9 1891.5 1701.2 True False 1637.7388414756888 1649.8305720556632 1550.5414515853076 1772.3026929717505 1548.7069783530428 1912.4973784926715 1407.7071275863946 1686.7713103231686 1474.2253846689057 1772.07036719459 1491.9631847953185 1.0977072746606473 1.1058118517059805 1.039262541721514 1.1878997491582821 1.0380329716818777 1.2818663342252952 0.9435267183080774 1.1305716706103413 0.9881111006577241 1.1877440309880698 1.0 10.542996221214676 -8.492764723825767 1.2777614711170884 0.9937269768232169 1.1112632000658005 0.0 0.10174414296709841 0.3698264876791494 1.1706695303378098 0.01446759367979215 0.017190059422130147 3.2154019897312447e-09 8.492764723825767 0.11753622324258362 SLLNVS(ph)R ddPTM_A549_MK2206_60min_R1 2 SLLNVSR 7 0 Q96M27;Q96M27-3;Q96M27-2 Q96M27 PRRC1 Protein PRRC1 1 SLLNVS(1)R;SLLNVS(1)R 65.535 0.024950999999999997 4745000.0 1507.29 1957.3 1566.51 1717.74 2497.2 2181.59 1802.1599999999999 2051.6 2355.8 2157.2 2379.3 True False 1761.683702297586 2056.918209695759 1788.6646734343333 2138.586377112278 2129.8651880208376 2412.4444057777605 2129.5891444631134 2342.420582761493 1822.2150614395666 1669.887021759532 1788.4541446606215 0.9850315187319967 1.1501095601677176 1.000117715499914 1.1957736705170587 1.1908972865642036 1.3488992228176742 1.190742938990603 1.3097459556090505 1.0188771497886806 0.933704130321111 1.0 10.804497413272658 -8.887135294467255 10.383322118395737 1.0083283247690247 1.172961976498949 0.3797715557159652 0.10539225722860927 0.27095999522472514 23.767993900358075 0.018203899526353078 0.01936327396508231 1.2967752275252609e-09 8.887135294467255 0.16463365172992428 SLLNVS(ph)R ddPTM_A549_PD325901_60min_R1 1 SLLNVSR 7 0 Q96M27;Q96M27-3;Q96M27-2 Q96M27 PRRC1 Protein PRRC1 1 SLLNVS(1)R 56.013000000000005 0.038636000000000004 3201600.0 1553.0 1327.1 1451.0 1290.7 1450.2 1195.8 1276.3 1564.2 1428.7 1712.9 1604.6 True False 1710.6594167418257 1438.9393744578545 1549.473585571819 1370.4236076076197 1348.342954918402 1186.0618012662264 1324.8702949181584 1533.000803908839 1368.656707438082 1604.7472016746565 1407.244372397466 1.2156093499435665 1.0225227420923284 1.101069306770112 0.9738348466605582 0.9581441442336587 0.842825755448274 0.9414642693941138 1.0893636059081389 0.9725792721461423 1.140347215559095 1.0 10.458657163508782 -4.22094729028834 0.8528391287686837 0.9797115383905944 2.2634211944380667 0.3679486131733076 0.07956358199706831 6.626696308636191 0.9338377962945779 0.009762232225873673 12.154417212448966 6.0124670552386846e-05 4.22094729028834 1.2837096560474723 SLLS(ph)GR ddPTM_A549_PD325901_60min_R1 2 SLLSGR 6 0 Q14126 Q14126 DSG2 Desmoglein-2 1 SLLS(1)GR;SLLS(1)GR 89.296 0.038055 6741000.0 2037.28 2039.4 1848.49 1674.35 2240.06 2753.2 2500.1 2057.3 2387.5 2530.8 2913.3 True False 2244.103165833732 2211.267395274922 1973.9396472733652 1777.7707967752506 2082.7259133874754 2730.778852020549 2595.242673607213 2016.2655375793718 2287.1616777548966 2371.004856090969 2554.9825689302857 0.8783242567378016 0.8654725954552129 0.7725843891372651 0.6958054502577541 0.8151624745758898 1.068805276884478 1.0157574870241808 0.7891504083425263 0.8951770182574984 0.9279925761229972 1.0 11.319097733240397 -7.1020184797939 9.283378154428295 0.948660341452094 0.7991757691503837 0.43893229293133407 0.08110663802074283 0.2908481372607118 24.499719714616408 0.012950223877111105 0.022460829898154504 7.906449843137344e-08 7.1020184797939 -0.1494845723017103 SLLS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SLLSPK 6 0 Q9P0U3;Q9P0U3-2 Q9P0U3 SENP1 Sentrin-specific protease 1 1 S(0.118)LLS(0.882)PK 77.923 0.044334 57039000.0 10697.0 9560.3 10117.0 10972.0 13004.0 10773.0 11582.0 12799.0 11089.0 11397.0 12997.0 True False 11782.951565284804 10365.980032875774 10803.600458463188 11649.715520780032 12090.643901364567 10685.26825977677 12022.759347913578 12543.713904378745 10622.967893036248 10677.391474975815 11398.4513947712 1.0337326674648089 0.9094200320607543 0.9478130040909867 1.0220437072815078 1.0607268902257103 0.9374315764226018 1.0547712958120579 1.1004752724684081 0.9319658894987534 0.9367405365147974 1.0 13.476550211233766 -4.912999499729449 19.504384301334838 0.9839370484362329 3.5117086241152604 0.03236430606247587 0.06041859080529505 852.7388934095793 194244.27560685415 0.008215447541021386 1524.372788053727 1.2218010675756647e-05 4.912999499729449 2.5277715756790275 SLLS(ph)PLHR ddPTM_A549_MK2206_60min_R1 2 SLLSPLHR 8 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 S(0.015)LLS(0.985)PLHR;S(0.027)LLS(0.973)PLHR 68.893 0.0022513999999999998 7629000.0 150.67 0.0 139.54 216.28 320.29999999999995 119.98 0.0 0.0 265.37 369.42 220.60399999999998 True False 176.09941247217006 0.0 159.32887024725468 269.26860970917795 273.1842942988444 132.67620396372172 0.0 0.0 205.26411870881142 285.9677654266672 165.8219384393359 1.0619789765429262 0.0 0.9608431293639916 1.6238418887358916 1.6474556796885222 0.8001124894114046 0.0 0.0 1.2378586370458153 1.7245472349322784 1.0 7.373491079502505 SLLS(ph)PLHR ddPTM_A549_PD325901_60min_R1 1 SLLSPLHR 8 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 S(0.004)LLS(0.996)PLHR 59.067 0.004087100000000001 2543000.0 125.72 0.0 0.0 0.0 146.28 0.0 129.1 129.46 170.14 169.52 141.92 True False 138.48300184982762 0.0 0.0 0.0 136.00579743860425 0.0 134.01297114623068 126.87781874059469 162.98960747778773 158.81647826953585 124.46473970500335 1.1126283811628037 0.0 0.0 0.0 1.0927255201831025 0.0 1.076714348689097 1.0193876518065328 1.3095243509454406 1.2759957450274697 1.0 6.959593281002614 -7.827499421302202 8.210944719950476 1.135069523764593 0.3510605527472716 0.48545054020322254 0.39399447329066145 0.16509560805063592 18.320028929706005 0.05899444682989413 0.08170491097193797 1.4876493563723202e-08 7.827499421302202 -0.7840089710173213 SLLS(ph)SPTK ddPTM_A549_MK2206_60min_R1 2 SLLSSPTK 8 0 Q92667;Q92667-2;I3NI36 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SLLS(0.5)S(0.5)PTK;S(0.001)LLS(0.922)S(0.076)PT(0.001)K 159.79 0.00027066 218170000.0 12304.6 12632.2 12390.5 11276.7 15071.599999999999 11682.599999999999 11538.6 11779.0 15264.9 15851.3 14922.900000000001 True False 14381.315661412775 13275.125023511351 14147.659214552174 14039.492006230306 12854.587605227789 12918.84497771774 13635.014261942397 13448.709321674603 11807.424523036261 12270.480320794031 11217.13207891229 1.28208490015456 1.1834687271328468 1.2612545804955926 1.251611544507346 1.1459780909055928 1.151706593702734 1.2155526177297689 1.1989436539628147 1.0526241859301715 1.0939053079228682 1.0 13.453416244051013 -8.81011876953954 2.7542571703106047 1.0211712155109005 1.2112211087861071 0.7017054722381354 0.04655543392635867 0.08199685643980155 1.2137947427340627 0.007930853747789932 0.00847594307937713 1.5483931111469724e-09 8.81011876953954 0.1900498932752066 SLLS(ph)SPTK ddPTM_A549_PD325901_60min_R1 2 SLLSSPTK 8 0 Q92667;Q92667-2;I3NI36 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SLLS(0.5)S(0.5)PTK;SLLS(0.768)S(0.231)PT(0.001)K 153.97 0.00047118 389920000.0 21635.0 23769.0 21569.7 21230.0 27238.0 21560.0 22590.0 23685.0 22733.0 21322.0 24345.0 True False 23831.369273154778 25772.097047312764 23033.54955114299 22541.328883171725 25324.89684599878 21384.42250819521 23449.674811722303 23212.58409447694 21777.61106613699 19975.725281164712 21350.719335670135 1.1161857780285782 1.2070833137811867 1.0788184317828295 1.0557643763089737 1.1861378742255808 1.0015785497432288 1.098308419639309 1.0872038421532821 1.0199942551703003 0.9355996379846437 1.0 14.381997056632764 -7.233253472827567 0.26666780821451846 0.9871660031227948 1.1883527806354681 0.515940431507617 0.05385573110923687 1.8072683024325327 0.23912929549531234 0.035929774590477546 0.11878557657234795 5.844488752308625e-08 7.233253472827567 0.20118677751267333 SLLSHEFQDET(ph)DTEEETLYSSK ddPTM_A549_MK2206_60min_R1 2 SLLSHEFQDETDTEEETLYSSK 22 0 O75976-2;O75976 O75976-2 CPD Carboxypeptidase D 1 SLLSHEFQDET(0.994)DT(0.006)EEETLYSSK;SLLSHEFQDET(0.999)DT(0.001)EEETLYSSK 254.48 5.006699999999999e-110 19801800.0 3506.7 3601.4 3064.9 3397.6 4151.9 3150.1 3046.8999999999996 3419.0 5761.6 5372.8 6457.0 True False 4098.545229416333 3784.6958771768805 3499.548906555906 4230.012152524062 3541.161009988674 3483.4414911328545 3600.482290287578 3903.653720248365 4456.6067993845845 4159.080748428343 4853.548695865862 0.8444430016551348 0.7797791089230433 0.7210289060325569 0.8715297646291437 0.729602447999533 0.7177102177011158 0.7418246969180269 0.804288565925671 0.9182161504180677 0.8569154260203363 1.0 12.244824251308096 -8.879081717167805 1.671048434205664 0.9710674825183201 0.7695920720610242 0.5350277919917746 0.05921729125640942 0.11816497647202992 0.6532803694053618 0.009987275678898597 0.010285318915395709 1.3210470416207028e-09 8.879081717167805 -0.2014754104572959 SLLSHEFQDET(ph)DTEEETLYSSK ddPTM_A549_PD325901_60min_R1 2 SLLSHEFQDETDTEEETLYSSK 22 0 O75976-2;O75976 O75976-2 CPD Carboxypeptidase D 1 SLLSHEFQDET(0.986)DT(0.014)EEETLYSSK;SLLSHEFQDET(0.98)DT(0.02)EEETLYSSK 245.49 1.7353999999999993e-98 36641000.0 6499.0 6450.5 6704.9 8508.099999999999 9701.3 9551.2 7876.799999999999 9203.5 7910.9 9253.8 9729.5 True False 7158.773695689071 6994.106273031721 7159.9348338390655 9033.626013702939 9019.914155668113 9473.418193890266 8176.555934350344 9019.928972493928 7578.432383895795 8669.513488736608 8532.833180382118 0.8389679657804451 0.8196698710941528 0.8391040446332069 1.0586901000797948 1.0570831475301599 1.110231267109575 0.9582463129771606 1.057084883978711 0.8881496009226348 1.016018162486609 1.0 13.05880912780403 -6.191335814690331 8.596521664417365 0.9802056764097132 0.8305632964103405 0.581611920365442 0.06450348121356914 0.2856215670163465 32.83344526121162 0.010841624251283929 0.028780221084340266 6.436713593741654e-07 6.191335814690331 -0.1496423799993727 SLLVQTK ddPTM_A549_PD325901_60min_R1 1 SLLVQTK 7 0 P39023;G5E9G0 P39023 RPL3 60S ribosomal protein L3 0 92.439 0.034003 4487700.0 6311.9 5286.8 6876.1 7124.7 6908.0 7297.6 6998.0 6038.3 8606.0 6818.4 7205.8 False True 6952.679441424803 5732.3371900262155 7342.753495348298 7564.776537632299 6422.80591130625 7238.170765111567 7264.312719452538 5917.8613695452905 8244.319748171161 6387.885060364577 6319.532281329712 1.1001889272669194 0.9070825078244648 1.161914073457868 1.1970469017116203 1.0163419736428356 1.1453649483674386 1.149501639688441 0.9364397721377088 1.304577519530678 1.010816113597015 1.0 12.62560207085305 -5.781009256472146 24.86102173507368 1.1291153146642547 1.003635642305907 0.06562966154447525 0.1113182731614052 300.228488610089 381402.75109869073 0.017341577159936748 0.05403027849180384 1.655734673071302e-06 5.781009256472146 -0.12547967235834778 SLLVTELGSSRT(ph)PETVR ddPTM_A549_MK2206_60min_R1 2 SLLVTELGSSRTPETVR 17 1 E5RG13;E5RIP7;H0YBL1;P29218;P29218-3 E5RG13 IMPA1 Inositol monophosphatase 1 1 SLLVTELGS(0.252)S(0.252)RT(0.491)PET(0.005)VR;SLLVT(0.002)ELGS(0.313)S(0.313)RT(0.367)PET(0.006)VR 69.763 0.00056081 7854400.0 2452.3 2704.2 2568.1000000000004 2584.1000000000004 3015.9 2277.3 2188.7 2576.6 3074.1 3552.0 3112.7 True False 2866.1882870213212 2841.83222942792 2932.2951962302914 3217.204616004659 2572.265105138572 2518.2823744506045 2586.358459008313 2941.8409405065636 2377.8212583289637 2749.6007330288608 2339.7306838503423 1.2250077783758522 1.2145980086696568 1.253261846104785 1.3750320232200037 1.0993851227806966 1.0763129243176104 1.1054086168379478 1.2573416935599475 1.016279896973415 1.1751783023608606 1.0 11.19212676172106 -8.006259013202731 0.45681997972927707 0.9911236321502391 1.2649627444731597 0.19549444673576988 0.09811832209678441 0.5179928170953481 0.24029657649129266 0.028982468484490854 0.05102864527090319 9.856914439770856e-09 8.006259013202731 0.2738391123229206 SLLVTELGSSRT(ph)PETVR ddPTM_A549_PD325901_60min_R1 2 SLLVTELGSSRTPETVR 17 1 E5RG13;E5RIP7;H0YBL1;P29218;P29218-3 E5RG13 IMPA1 Inositol monophosphatase 1 1 SLLVT(0.004)ELGS(0.153)S(0.153)RT(0.605)PET(0.087)VR;SLLVTELGS(0.24)S(0.155)RT(0.603)PET(0.002)VR 131.18 1.7172e-12 7327700.0 3837.7999999999997 3664.7 4320.8 3771.3 4813.5 4479.0 3697.6000000000004 4889.2 4278.299999999999 4363.3 4557.9 True False 4227.410630760962 3973.53713026577 4614.03547108113 4004.244635756265 4475.416365673516 4442.524509007717 3838.3141914043567 4791.6810704967975 4098.497929189015 4087.800493354563 3997.307194908645 1.0575646115328334 0.9940534806348756 1.1542859345306282 1.0017355285719487 1.1196078128230518 1.111379309217501 0.9602249725248044 1.1987272523362587 1.0253147254755042 1.0226385649222003 1.0 11.964812733462786 -8.978631906208847 24.986349344968875 1.0111681836316024 1.0736895454314614 0.13130475842253297 0.06780253132159213 187.88250940268884 219699.3886428992 0.010911257660425487 0.01117616686578812 1.0504323635565477e-09 8.978631906208847 0.06252136179985901 SLMS(ph)S(ph)PEDLTK ddPTM_A549_PD325901_60min_R1 1 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.095)LMS(0.881)S(0.825)PEDLT(0.199)K 56.086999999999996 0.018213 3474300.0 2122.4 2249.6 2086.9 1721.6 2181.5 1772.1 2009.3 2108.2 1900.0 2254.5 2249.0 True False 2337.864485571701 2439.1816869718864 2228.5295835491597 1827.9393219627152 2028.2789657664412 1757.668605137882 2085.765011031149 2066.150297149093 1820.1496074279812 2112.150485244622 1972.3872575856287 1.1852968916628714 1.2366646953284692 1.1298641151621873 0.9267649215095163 1.0283370864245132 0.8911376801781914 1.057482501476056 1.0475378449150186 0.9228155375816007 1.0708599323593662 1.0 10.945727122254091 -6.085358290730886 3.7761147434810862 0.9731980792767869 1.207881731274938 0.6707264308105597 0.05976788763420528 0.07925276412861977 2.097270211199619 0.007473486738702754 0.022082519610639284 8.215645836967335e-07 6.085358290730886 0.234683651998151 SLMS(ph)SPEDLTK ddPTM_A549_MK2206_60min_R1 2 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.001)LMS(0.963)S(0.035)PEDLTK;S(0.089)LMS(0.83)S(0.08)PEDLTK 74.962 0.0013619 637880.0 1284.2 1458.8 1289.3 1102.3 1874.8 1478.2 1113.8 1054.6 1839.7 1466.4 1634.1 True False 1500.9415643244236 1533.0466889614117 1472.142127058804 1372.363549484128 1599.0194035325417 1634.6221428502527 1316.1630427392781 1204.0927795770478 1423.0108873972206 1135.139221540969 1228.3078711343344 1.2219587609890619 1.2480964463295778 1.1985123287529618 1.1172797811812107 1.301806689601246 1.3307918814691708 1.071525367271163 0.9802858125993086 1.1585132040903388 0.9241487807878942 1.0 10.262456497234982 -7.78780007205969 23.698047376945677 1.0679307672356013 1.2327741870370563 0.6122853514569724 0.08001427396276536 76.95678629183851 69183.20623604683 0.012519513642879433 0.01730196179415032 1.630046253521732e-08 7.78780007205969 0.164843419801455 SLMS(ph)SPEDLTK ddPTM_A549_PD325901_60min_R1 1 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.019)LMS(0.49)S(0.49)PEDLT(0.001)K 44.614 0.029805 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SLMS(ph)SPEDLTKDFEELKAEEVDVTK ddPTM_A549_MK2206_60min_R1 1 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.255)LMS(0.363)S(0.363)PEDLT(0.019)KDFEELKAEEVDVTK 59.65 0.00023895 17307000.0 1169.7 1024.9 1332.0 968.53 1113.2 1091.0 998.76 759.83 2106.0 1409.0 1422.9 True False 1367.1167635806553 1077.0630322981574 1520.8976291338909 1205.819893478964 949.4497546471231 1206.4488958528113 1180.221763841157 867.5382293817823 1628.9943625909361 1090.7059214070002 1069.5546599578022 1.2782112170261528 1.0070200922135681 1.4219914942859448 1.1274037116780344 0.8877056874162769 1.1279918091333547 1.1034702647994832 0.8111209850799116 1.5230585435018402 1.0197757648496735 1.0 10.062794498474066 -8.7642228341668 24.99964758588431 1.2469998342895265 1.0990109816838194 0.005807308131634548 0.20514656572587736 151.3708565571137 1359536.3339817259 0.04062045836122303 0.0441937679688232 1.720985320081492e-09 8.7642228341668 -0.14798885260570716 SLMS(ph)SPEDLTKDFEELKAEEVDVTK ddPTM_A549_PD325901_60min_R1 2 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SLMS(0.545)S(0.455)PEDLTKDFEELKAEEVDVTK;S(0.081)LMS(0.45)S(0.45)PEDLT(0.019)KDFEELKAEEVDVTK 155.58 1.1471e-40 46967000.0 7241.3 8251.6 7571.799999999999 6826.8 9022.8 7581.200000000001 7737.4 8250.0 8890.1 7801.2 9107.3 True False 7976.431445236687 8946.991290992722 8085.667880932253 7248.475931212282 8389.069654970179 7519.461220738847 8031.850991067736 8085.447278000207 8516.480013155522 7308.630900638882 7987.159835931345 0.9986567952920643 1.12017181010244 1.0123333008258775 0.9075160733110673 1.050319491195204 0.9414436890209095 1.0055953750838116 1.0123056811291922 1.0662713890916464 0.9150475326360684 1.0 12.96346686928634 -8.541777653670733 24.537464586983162 1.0317155449527429 1.0056355281096712 0.0 0.06379527469362326 536.621818499497 696720.5429831268 0.009384548949628908 0.010642096738956735 2.8722507157164987e-09 8.541777653670733 -0.026080016843071707 SLMSVSGAETVNGEVPAT(ph)PVKR ddPTM_A549_MK2206_60min_R1 5 SLMSVSGAETVNGEVPATPVKR 22 1 Q8IUW5 Q8IUW5 RELL1 RELT-like protein 1 1 SLMSVSGAETVNGEVPAT(1)PVKR;SLMSVSGAETVNGEVPAT(1)PVKR;SLMSVSGAETVNGEVPAT(1)PVKR;SLMSVSGAETVNGEVPAT(1)PVKR;SLMSVSGAET(0.002)VNGEVPAT(0.998)PVKR 124.28 4.920600000000001e-16 34967300.0 10632.7 12756.0 12092.4 9640.400000000001 14548.599999999999 11710.4 11435.8 11672.9 18306.7 15903.8 15993.199999999999 True False 12427.239815443307 13405.225914718798 13807.284152056056 12002.298432774009 12408.520212413885 12949.586755265593 13513.536832607148 13327.569321756979 14160.261679792731 12311.120534331196 12021.64705013503 1.033738535461638 1.1150906243390524 1.1485351461804036 0.9983905185969668 1.0321813775321669 1.0771890657961165 1.1241002814548078 1.1086308944336607 1.17789697374568 1.0240793531026944 1.0 13.553346948500131 -7.530306116441112 24.49416520152979 1.0915273752073562 1.067759763938359 0.026115760554237477 0.05857393054220753 584.0508221092612 1926084.867719165 0.01146058468755942 0.017024959537662167 2.949129772774675e-08 7.530306116441112 -0.02376761126899729 SLMSVSGAETVNGEVPAT(ph)PVKR ddPTM_A549_PD325901_60min_R1 4 SLMSVSGAETVNGEVPATPVKR 22 1 Q8IUW5 Q8IUW5 RELL1 RELT-like protein 1 1 SLMSVS(0.002)GAET(0.009)VNGEVPAT(0.988)PVKR;SLMSVSGAET(0.006)VNGEVPAT(0.994)PVKR;SLMSVSGAETVNGEVPAT(1)PVKR;SLMSVSGAETVNGEVPAT(1)PVKR 143.12 2.6132e-27 65159000.0 14334.0 14127.2 15740.5 16832.1 18551.1 17362.8 15571.4 18279.7 18166.399999999998 17897.9 21998.000000000004 True False 15789.177127866926 15317.748723412717 16808.744985315796 17871.7805885273 17248.134733820698 17221.403113417993 16163.978147997037 17915.09704335277 17402.92938335773 16767.823539525274 19292.385456811324 0.8184149732656537 0.7939789901929762 0.8712631739058138 0.9263644782826757 0.8940384677899493 0.8926528630671665 0.8378423800510486 0.9286097400167643 0.9020620815563009 0.869142054882864 1.0 14.235743919719122 -14.999999999456442 0.05932468706906722 1.484951583579446 0.66615990697845 0.17707652554457765 0.049423721565495994 110.24263622458791 0.4948359844611621 7.862650327763431 1.4213950382071798 1.0000000012515888e-15 14.999999999456442 -0.818791676600996 SLNDDGS(ph)SDPR ddPTM_A549_MK2206_60min_R1 2 SLNDDGSSDPR 11 0 P54259 P54259 ATN1 Atrophin-1 1 SLNDDGS(0.882)S(0.118)DPR;SLNDDGS(0.5)S(0.5)DPR 113.63 2.494e-05 7136400.0 1009.01 904.24 716.53 805.15 1180.62 850.98 998.67 1130.38 1233.31 1481.32 1569.16 True False 1179.3062200739653 950.261953678686 818.1447283808618 1002.4117861445573 1006.9523619578572 941.0301387651928 1180.1154120061356 1290.6148266435637 953.9672541913707 1146.6887831785791 1179.4942653871567 0.9998405712357323 0.8056520337271605 0.6936402765064011 0.8498657565032977 0.8537153520007454 0.7978251072346753 1.0005266211436603 1.0942103446513434 0.8087934652893296 0.9721868234791209 1.0 10.203952688981198 -7.746977040398899 24.981885291798562 0.9303796312287155 0.8274768430337819 0.3012837130075037 0.09690947501738756 329.30849775351237 568837.9554661097 0.0168052848125459 0.024863640826006443 1.790700519486002e-08 7.746977040398899 -0.10290278819493359 SLNDDGS(ph)SDPR ddPTM_A549_PD325901_60min_R1 1 SLNDDGSSDPR 11 0 P54259 P54259 ATN1 Atrophin-1 1 SLNDDGS(0.842)S(0.157)DPR 75.819 0.0012856 3650700.0 592.43 568.57 535.55 336.11 700.94 589.34 404.84 461.81 644.6 710.15 717.52 True False 652.5730574760845 616.4853892965888 571.8956435237681 356.870751338806 651.7083925117258 584.5406104350542 420.2464077369485 452.5988372670635 617.5097036568825 665.3110078050431 629.2695887340333 1.0370325678520922 0.9796840659928222 0.9088245384212984 0.5671190181886269 1.0356584907000432 0.928919211893006 0.667832063174071 0.7192447328935813 0.9813118490267274 1.057275005365376 1.0 9.297534411974768 -8.955459916453893 24.39704025352407 0.991755311340608 0.853797913511876 0.1862952281980208 0.1447254832501231 138.56435502615594 75899.49776747539 0.025059147636598098 0.02666309025680079 1.1080008244507882e-09 8.955459916453893 -0.13795739782873206 SLNERAET(ph)PPLPIPPPPPDIQPLER ddPTM_A549_PD325901_60min_R1 1 SLNERAETPPLPIPPPPPDIQPLER 25 1 U3KPW8;A0A669KB72;Q8IX15;Q8IX15-3 U3KPW8 HOMEZ Homeobox and leucine zipper protein Homez 1 S(0.251)LNERAET(0.749)PPLPIPPPPPDIQPLER 55.442 0.0016469999999999998 7457100.0 1890.3 2053.8 1611.0 2133.0 2688.9 2124.1 2279.9 2609.8 2349.9 1856.2 2289.4 True False 2082.201864434689 2226.880933811726 1720.3321477299794 2264.7505656055264 2500.0409402014157 2106.8020338431106 2366.6628421091496 2557.7454916515067 2251.141874997374 1738.9992152189252 2007.8183137023304 1.037046953015982 1.1091048022694114 0.8568166432139774 1.1279658872268297 1.2451529718301293 1.0492991419917166 1.1787236055961285 1.273892898673254 1.1211880376000583 0.8661138327861377 1.0 10.97141301123178 SLNFQEDDDT(ph)SRETFASDTNEALASLDESQEGHAEAK ddPTM_A549_PD325901_60min_R1 1 SLNFQEDDDTSRETFASDTNEALASLDESQEGHAEAK 37 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 S(0.01)LNFQEDDDT(0.196)S(0.196)RET(0.196)FAS(0.196)DT(0.196)NEALAS(0.01)LDESQEGHAEAK 66.097 0.00029628 3378100.0 617.27 756.35 829.37 843.12 1094.1 863.61 918.07 760.65 852.04 879.39 1196.6 True False 679.9347959898428 820.0902689105554 885.6560356069602 895.1976075355509 1017.2541904400933 856.5770464889835 953.0076562371808 745.4782390316188 816.2317218489144 823.8651653223637 1049.4257858723715 0.647911272186459 0.7814657119644025 0.8439434665413028 0.8530356501497501 0.9693436202298628 0.8162340377189456 0.9081229650222099 0.7103677545067317 0.7777888944956631 0.7850628185560519 1.0 10.035384429243868 -10.781187432534796 1.010871891332165 1.000869457567057 0.8162451505703321 0.0 0.10399344062230408 0.4534781514705051 0.8169652563030078 0.06003565795631578 0.014870758824928635 1.655055521507744e-11 10.781187432534796 -0.18462430699672483 SLNFQEDDDTSRETFAS(ph)DTNEALASLDESQEGHAEAK ddPTM_A549_PD325901_60min_R1 1 SLNFQEDDDTSRETFASDTNEALASLDESQEGHAEAK 37 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 S(0.003)LNFQEDDDT(0.087)S(0.087)RET(0.087)FAS(0.334)DT(0.334)NEALAS(0.056)LDES(0.011)QEGHAEAK 51.868 0.0019297000000000001 2668300.0 584.32 357.74 394.65 498.67 598.05 363.71 393.79 512.66 431.35 546.08 549.24 True False 643.6397362463508 387.8880052886393 421.4333222232379 529.4717133382595 556.0450311604955 360.74806634766634 408.7758939401563 502.4345941260104 413.22185956003125 511.6004156054043 481.68696191922214 1.3362199667639911 0.8052698867811316 0.8749112090227416 1.0992029164099542 1.1543701098842343 0.7489263668468631 0.8486339184092493 1.0430728540463745 0.8578639079488468 1.062101439422391 1.0 8.911952064023367 -7.2438825199142585 24.87367120343814 0.9219824188563419 1.0327392201636167 0.1348795782218385 0.15602640381392746 1387.618377906178 1965907.975582371 0.021838675434301853 0.0377714020219685 5.7031852707999275e-08 7.2438825199142585 0.11075680130727483 SLNFQEDDDTSRETFASDTNEALASLDES(ph)QEGHAEAK ddPTM_A549_PD325901_60min_R1 2 SLNFQEDDDTSRETFASDTNEALASLDESQEGHAEAK 37 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 1 SLNFQEDDDTSRETFASDTNEALAS(0.002)LDES(0.998)QEGHAEAK;SLNFQEDDDTSRETFASDTNEALASLDES(1)QEGHAEAK 172.74 1.4764e-65 20996000.0 2215.4 2053.8999999999996 2491.8999999999996 2324.62 2808.0 2255.3 2112.67 2579.9 2859.1 2415.6 2300.81 True False 2440.3057771087197 2226.9893611626767 2661.0153190120036 2468.2064978049284 2610.77576707411 2236.933584542331 2193.068812947384 2528.441870607602 2738.9419697880726 2263.078603751125 2017.8249560362788 1.2093743661007854 1.1036583497992167 1.3187542908772314 1.2232014924889016 1.2938564166649005 1.1085865391101413 1.0868478984695213 1.2530531268551437 1.3573734240894326 1.1215435694663083 1.0 10.978585312420707 -11.044081638486677 1.3585251995710195 1.0005945505818186 1.2301127615990837 0.2659654461689682 0.09181298450293962 0.323684703821703 1.0695955107835506 0.06722687774956282 0.015195956784264358 9.034796220544557e-12 11.044081638486677 0.2295182110172651 SLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_A549_MK2206_60min_R1 2 SLPAPVAQRPDSPGGGLQAPGQK 23 1 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK 165.77 3.3687e-34 392440000.0 6187.3 6511.2 6273.3 5550.1 7851.4 7041.6 6374.8 6048.0 9793.900000000001 9440.900000000001 10289.8 True False 7231.56497503855 6842.592268416199 7162.948270905136 6909.874749153456 6696.469460686684 7786.737438164216 7533.01864325224 6905.322521223193 7575.597287644529 7308.194133010186 7734.55867596725 0.9349680153708579 0.884677789009144 0.9260965713741087 0.8933767314512405 0.8657855918132593 1.0067461848029022 0.9739429176041765 0.8927881745443794 0.9794479045305269 0.9448753883939287 1.0 12.917103260349629 -8.220636734482706 0.4228491229608626 1.0006734055885236 0.8988568832538855 0.2089541055991877 0.04141438145212912 0.6637075800394282 0.28397567002143215 0.01572653507519157 0.023254671359910346 6.016767994783845e-09 8.220636734482706 -0.10181652233463812 SLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_A549_PD325901_60min_R1 2 SLPAPVAQRPDSPGGGLQAPGQK 23 1 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK 181.77 4.3738e-50 559170000.0 9130.3 8487.400000000001 9544.099999999999 8381.8 10320.6 9382.599999999999 9016.8 10632.8 9596.6 9686.7 10486.5 True False 10057.201334628393 9202.662984532893 10191.820019335635 8899.52474955105 9595.71666013713 9306.191216391115 9359.939258182287 10420.720462729767 9193.288275075454 9075.080108857437 9196.726979400491 1.0935631075224104 1.0006454475756101 1.1082007807956056 0.9676839129273777 1.0433838779416118 1.0119025211073254 1.0177467787341485 1.1330901184813758 0.9996260947690695 0.986772808324578 1.0 13.166904796838436 -2.000001744673999 0.035499452396627454 0.856821924192274 1.306155301749682 0.11584571980774905 0.04892444470604841 1120.5036945926595 2.9560029244201207 10.85371859942903 31.75324056867993 0.009999959827477268 2.000001744673999 0.4493333775574081 SLPELDRDKS(ph)DSDTEGLLFSR ddPTM_A549_PD325901_60min_R1 1 SLPELDRDKSDSDTEGLLFSR 21 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 SLPELDRDKS(0.489)DS(0.489)DT(0.018)EGLLFS(0.003)R 87.339 1.1572e-06 22387000.0 6051.3 6042.8 5450.5 5323.9 6620.0 5735.8 5894.7 6196.8 6419.3 6280.2 8111.3 True False 6665.623521268391 6552.047963208448 5820.403706519092 5652.745211545829 6155.034037760183 5689.089546498427 6119.026034203606 6073.199962704446 6149.519144717071 5883.667100214363 7113.661521767146 0.9370172450393093 0.9210514083583802 0.8182008222782593 0.7946322993087247 0.865241341456344 0.7997413890287497 0.8601795313819688 0.8537375505034948 0.8644660876680893 0.827094047448123 1.0 12.796376615192676 -10.450646218459282 0.6737742750353575 1.0064252395958628 0.8528775706512562 0.0 0.06561226109927816 0.43687867769740285 0.33929141152535575 0.03662895680388489 0.009228106085055086 3.5428582908845534e-11 10.450646218459282 -0.15354766894460659 SLPELDRDKSDS(ph)DTEGLLFSR ddPTM_A549_MK2206_60min_R1 4 SLPELDRDKSDSDTEGLLFSR 21 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 SLPELDRDKS(0.157)DS(0.813)DT(0.031)EGLLFSR;SLPELDRDKS(0.001)DS(0.995)DT(0.004)EGLLFSR;SLPELDRDKS(0.157)DS(0.813)DT(0.031)EGLLFSR;SLPELDRDKS(0.034)DS(0.966)DTEGLLFSR 341.04 2.9525999999999985e-208 199772000.0 24410.399999999998 28312.6 25551.0 23999.799999999996 35815.3 25933.4 25771.399999999998 27151.4 41940.3 42971.7 42135.2 True False 28530.278743018924 29753.590407107797 29174.51600750754 29879.752077391957 30546.916814241024 28677.655174802312 30453.729789595105 31000.19409767518 32440.88901489678 33264.36312485821 31671.866967639322 0.9008082400753227 0.9394327918056892 0.9211492343446805 0.9434161903976657 0.9644810912300271 0.9054614685046404 0.9615388262621574 0.9787927604441373 1.0242809193421785 1.0502810951702348 1.0 14.950914292244478 -8.29194558247708 2.0238407480048908 1.0112377366116667 0.9317311450615656 0.7652345869264037 0.022090045862443966 0.10520602813851193 0.841395231564283 0.003242784845448886 0.004124474862375135 5.1056897075842105e-09 8.29194558247708 -0.07950659155010109 SLPELDRDKSDS(ph)DTEGLLFSR ddPTM_A549_PD325901_60min_R1 6 SLPELDRDKSDSDTEGLLFSR 21 2 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2 A0A0C4DH22;Q9H4G0-3 EPB41L1 Band 4.1-like protein 1 1 SLPELDRDKS(0.026)DS(0.771)DT(0.203)EGLLFSR;SLPELDRDKS(0.284)DS(0.684)DT(0.032)EGLLFSR;SLPELDRDKSDS(1)DTEGLLFSR;SLPELDRDKS(0.026)DS(0.939)DT(0.035)EGLLFSR;SLPELDRDKS(0.001)DS(0.999)DTEGLLFSR;SLPELDRDKS(0.169)DS(0.828)DT(0.003)EGLLFSR 334.94 1.843099999999999e-207 380466000.0 38547.0 39816.0 40892.9 41034.6 47221.399999999994 45919.600000000006 45268.299999999996 46969.299999999996 46037.9 48347.49999999999 46732.6 True False 42460.26306319841 43171.434054264166 43668.138102984034 43569.21404566175 43904.731768986225 45545.64600219487 46991.00992826422 46032.460464796975 44103.08716410983 45294.83059896402 40984.78646235936 1.036000592614875 1.0533526652362342 1.0654718951162299 1.063058217606573 1.071244614371934 1.1112817690052925 1.146547633508375 1.1231596999309346 1.076084346678598 1.1051620493512397 1.0 15.322800860781603 -10.304553192307246 0.9311385170332604 1.0047150630775634 1.0834165338542654 0.0 0.042995719769638945 0.3734627057677208 0.6292373614710434 0.016891349699841282 0.006633545518784155 4.959601785655114e-11 10.304553192307246 0.07870147077670198 SLPESTSAPASGPSDGS(ph)PQPCTHPPGPVKEPQEKEDADGER ddPTM_A549_MK2206_60min_R1 1 SLPESTSAPASGPSDGSPQPCTHPPGPVKEPQEKEDADGER 41 2 H3BNC2;Q7LC14;O00221 H3BNC2 NFKBIE NF-kappa-B inhibitor epsilon 1 SLPESTSAPAS(0.001)GPS(0.176)DGS(0.815)PQPCT(0.008)HPPGPVKEPQEKEDADGER 93.589 2.7238e-10 8454500.0 671.74 928.67 493.81 751.85 970.14 656.4 659.59 634.55 1195.8 768.94 1141.2 True False 785.1132895337855 975.9353363297196 563.8396833653208 936.0532837518296 827.4336911366868 725.8598123169436 779.428965128749 724.4994057278739 924.9532093002094 595.2359199479768 857.808544482286 0.9152546854235705 1.137707641882638 0.657302479664172 1.0912146886071956 0.9645901716169878 0.8461792750677511 0.9086281200418195 0.8445933657202397 1.0782746514357084 0.6939029970926904 1.0 9.744511876255103 -8.773362527900941 24.989268747507765 1.0369630322091277 0.9234011175244248 0.0 0.1594921822869319 286.39664377378136 600245.7726125711 0.019746592365575945 0.021101647608091988 1.6851457604298422e-09 8.773362527900941 -0.11356191468470289 SLPHLPGT(ph)PRPTSSLPPGSVK ddPTM_A549_MK2206_60min_R1 2 SLPHLPGTPRPTSSLPPGSVK 21 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 S(0.002)LPHLPGT(0.822)PRPT(0.058)S(0.058)S(0.058)LPPGS(0.002)VK;SLPHLPGT(0.984)PRPT(0.005)S(0.005)S(0.005)LPPGSVK 78.202 0.00011605 7698700.0 2491.2 2709.3 2947.0 2749.6 4217.6 3197.8999999999996 3303.1000000000004 2825.6000000000004 4520.9 3687.5 3821.6 True False 2911.653656007632 2847.1917976440595 3364.928913706892 3423.2521234342335 3597.1966270209364 3536.2996554057786 3903.230513981065 3226.137453037081 3496.923368393807 2854.491188920024 2872.5912492056646 1.0135983171336225 0.9911580000918584 1.1713914796048237 1.1916948241003098 1.2522479931718937 1.2310486764810846 1.3587838210745768 1.1230757087104473 1.2173410920752419 0.9936990477532626 1.0 11.48813700614465 -3.344976474925249 10.34254311817436 1.1357431855770264 1.1417143291236969 0.0 0.11986761492180119 0.0 0.0 0.01709402886759338 0.0 0.0004518804213904506 3.344976474925249 0.005971143546670499 SLPHLPGT(ph)PRPTSSLPPGSVK ddPTM_A549_PD325901_60min_R1 2 SLPHLPGTPRPTSSLPPGSVK 21 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 S(0.018)LPHLPGT(0.851)PRPT(0.044)S(0.044)S(0.044)LPPGSVK;SLPHLPGT(0.875)PRPT(0.042)S(0.042)S(0.042)LPPGSVK 71.656 0.00030619999999999996 17506000.0 4421.200000000001 3977.0 4496.0 4785.8 6353.0 6213.9 4851.1 4875.9 7392.3 5152.2 4372.6 True False 4870.036969284585 4312.155747282712 4801.125596644315 5081.407996659601 5906.787196660194 6163.29605861198 5035.711265123779 4778.646349430444 7081.627338415715 4826.88921272005 3834.797920195163 1.269959218356084 1.1244805689952118 1.2519892042707619 1.3250784271837184 1.5403125065739012 1.607202305538518 1.3131620935236918 1.2461272924616706 1.8466754926307334 1.2587075807307198 1.0 11.904934839648783 -6.337628365331605 2.9426109457514698 1.4140721434660755 1.2007832747871678 0.12639291836497624 0.21072644809917337 0.5625466378467492 9.46235263395993 0.043689081208116695 0.11617502074085237 4.5959112613945583e-07 6.337628365331605 -0.21328886867890762 SLPIYS(ph)PEKVEEYR ddPTM_A549_PD325901_60min_R1 2 SLPIYSPEKVEEYR 14 1 E9PDF6;O43795-2;O43795;E7EQD9;C9K0I9;C9JUP5;C9JYW1 E9PDF6 MYO1B Unconventional myosin-Ib 1 S(0.004)LPIY(0.002)S(0.994)PEKVEEYR;S(0.004)LPIY(0.011)S(0.985)PEKVEEYR 63.918 0.0015027999999999999 6174700.0 1871.8899999999999 2234.49 2465.64 2214.3 2355.16 2695.1 2196.4 2207.3 2976.1 2701.7 2592.8 True False 2061.9228947874158 2422.7983142433372 2632.973157497793 2351.0722819598273 2189.7416864609186 2673.151999157556 2279.985203916197 2163.273669906648 2851.024866666532 2531.1142009249943 2273.902037113392 0.9067773638150773 1.0654805152991382 1.1579096700402383 1.0339373656326898 0.9629885767817373 1.1755792270413692 1.0026752105867003 0.951348666124957 1.2538028552389924 1.1131148834090148 1.0 11.150954386906752 -8.738795087014951 24.999790648026714 1.119851409014672 1.0389553759758676 0.15033875117395246 0.09445100979157217 433.51676878782195 478611.81433930795 0.019434421321435743 0.02202905267411682 1.8247564733241053e-09 8.738795087014951 -0.08089603303880444 SLPLDQT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 SLPLDQTLPR 10 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 SLPLDQT(1)LPR;SLPLDQT(1)LPR 78.342 0.0014179 4899600.0 2339.1099999999997 3005.8999999999996 2507.91 2357.8 3376.1 2852.3999999999996 2386.7 2837.2 3636.9 4267.2 3504.6 True False 2733.8945822511296 3158.887470763029 2863.5693491600423 2935.4611058456644 2879.4801622926266 3154.239074730118 2820.332496054798 3239.38178856059 2813.147956935885 3303.2365563008893 2634.311097960585 1.0378024768477951 1.1991322791027064 1.087027781713763 1.114318315751781 1.0930676200399585 1.197367720605227 1.0706148177556651 1.2296883959789089 1.0678875244134038 1.253928041702504 1.0 11.36321001483599 -9.295061400212736 1.7300991468703264 1.0206623860447226 1.1279618245597198 0.0 0.09130471058937129 0.2174681969089328 1.3420108434289806 0.011559862269926632 0.010213707687964299 5.069190353932299e-10 9.295061400212736 0.10729943851499724 SLPLDQT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 SLPLDQTLPR 10 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 SLPLDQT(1)LPR;SLPLDQT(1)LPR 99.28299999999999 0.00050529 4092500.0 1723.38 1836.6599999999999 1704.28 1830.38 1612.06 1860.88 1375.31 2315.7 2144.4700000000003 2067.3 1906.1 True False 1898.336268914699 1991.4417839588311 1819.9426894681883 1943.43841550541 1498.834466905089 1845.725610252797 1427.6481746485092 2269.5115468684944 2054.345383495307 1936.7703251923742 1671.661783763437 1.1355982934783295 1.1912946765316779 1.0887026952132173 1.1625787192012718 0.8966134665893604 1.1041262222897072 0.8540293189178637 1.357637991675032 1.228924058352479 1.1585898200245355 1.0 10.707067270690313 -11.174122737003978 1.6092416820504511 1.000542790735569 1.1270894417536912 0.0 0.1420397267760264 0.7456009034495942 3.491923831109552 0.09772862982280357 0.02104022623698378 6.696953184714473e-12 11.174122737003978 0.12654665101812212 SLPS(ph)FSEIK ddPTM_A549_MK2206_60min_R1 2 SLPSFSEIK 9 0 P35367 P35367 HRH1 Histamine H1 receptor 1 S(0.001)LPS(0.957)FS(0.043)EIK;S(0.001)LPS(0.997)FS(0.002)EIK 97.456 0.00086238 7419200.0 4006.9 5137.4 4531.6 3625.8 6606.5 4782.6 4324.200000000001 4746.7 6568.0 5525.9 5999.0 True False 4683.166760700461 5398.8717163904275 5174.2490211585155 4514.121162768348 5634.6926015776335 5288.691557567057 5109.85116664858 5419.559261159087 5080.358486940774 4277.595352095773 4509.28273602281 1.0385613488567844 1.1972794859947582 1.147466088081717 1.0010729925420034 1.249576247806416 1.1728454096075789 1.1331849133850214 1.2018672543782742 1.126644476372234 0.9486199030998473 1.0 12.13868225573085 -10.290991942506345 0.7953274388351876 1.0034507256149738 1.1440163455786192 0.43884608315708207 0.07027714494688327 0.47740116037775326 0.572886561286461 0.036979422654808775 0.01286738147054125 5.116913288946128e-11 10.290991942506345 0.14056561996364536 SLPS(ph)FSEIK ddPTM_A549_PD325901_60min_R1 2 SLPSFSEIK 9 0 P35367 P35367 HRH1 Histamine H1 receptor 1 S(0.046)LPS(0.951)FS(0.002)EIK;S(0.017)LPS(0.977)FS(0.006)EIK 85.958 0.0012317 14803500.0 7257.4 8194.2 8153.799999999999 7628.1 9099.400000000001 9156.599999999999 8421.8 9400.0 7629.8 9071.7 9386.0 True False 7994.165905384491 8884.753991547404 8707.165900782564 8099.270412327942 8460.289535225838 9082.031685461057 8742.296207585785 9212.50962584266 7309.146039344215 8498.911313813996 8231.58150275621 0.9711579606795823 1.0793495743888937 1.0577755802900224 0.9839264070477872 1.0277842152681171 1.1033155272070243 1.0620433272340888 1.1191664229720624 0.887939460588086 1.0324761178600097 1.0 13.006953921504538 -8.76449126296575 24.999999920148387 0.9470825247600776 1.0509250550581937 0.2458942586352162 0.05506814561517825 56.532811509983866 463096.2295208218 0.009755142283166108 0.010606641778486749 1.719921941875333e-09 8.76449126296575 0.10384253029811608 SLPS(ph)HMEEAPNVFQLYQR ddPTM_A549_PD325901_60min_R1 2 SLPSHMEEAPNVFQLYQR 18 0 Q5THJ4-2;Q5THJ4;H3BLS7 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 S(0.375)LPS(0.625)HMEEAPNVFQLYQR;S(0.244)LPS(0.756)HMEEAPNVFQLYQR 142.43 3.5884e-17 6805800.0 2158.1000000000004 1967.1599999999999 2401.5 1915.8600000000001 2148.92 2528.05 1989.1799999999998 2119.8900000000003 2530.95 2108.23 2403.5 True False 2377.1887232907484 2132.93947694862 2564.4802313926416 2034.1983209662467 1997.9872725715434 2507.4623989723054 2064.8793334210623 2077.6071309284657 2424.582973115711 1975.115998007218 2107.884737041823 1.127760299942616 1.011886200163847 1.2166131223055388 0.9650424832151938 0.9478636271997926 1.1895633356552713 0.9795978390729685 0.9856360238388326 1.1502445700699642 0.937013283173666 1.0 11.04158026461417 SLPS(ph)HMEEAPNVFQLYQRPTSASR ddPTM_A549_MK2206_60min_R1 1 SLPSHMEEAPNVFQLYQRPTSASR 24 1 Q5THJ4-2;Q5THJ4;H3BLS7 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 S(0.424)LPS(0.576)HMEEAPNVFQLYQRPTSASR 101.59 5.241399999999999e-11 1335900.0 407.87 367.94 379.46 356.97 505.38 485.23 369.13 469.26 929.17 592.43 616.02 True False 476.7084845358998 386.666574401194 433.27313389725697 444.42766602499205 431.0392714728376 536.5767165303937 436.1961429038875 535.7790420484781 718.7144785795912 458.59965153949565 463.045232712914 1.0295073803976662 0.8350514098499002 0.9357036921831012 0.9597932008092506 0.9308794066347293 1.1587997859014108 0.9420162698755764 1.157077115143649 1.5521474530009705 0.9903992507440961 1.0 8.855009320243342 -8.410901171670266 4.529482256187967 1.2646677019169246 0.9700961480595317 0.2239335168626465 0.16262702900682185 0.21585353618565425 7.191304698984031 0.034290376328216694 0.041466531164461064 3.882387037866089e-09 8.410901171670266 -0.29457155385739286 SLPS(ph)HMEEAPNVFQLYQRPTSASR ddPTM_A549_PD325901_60min_R1 2 SLPSHMEEAPNVFQLYQRPTSASR 24 1 Q5THJ4-2;Q5THJ4;H3BLS7 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 S(0.456)LPS(0.544)HMEEAPNVFQLYQRPTSASR;S(0.465)LPS(0.535)HMEEAPNVFQLYQRPTSASR 130.01 6.669700000000001e-23 4057700.0 1317.79 1315.8600000000001 1054.31 1405.19 1232.29 1497.6799999999998 1438.99 1428.56 1302.2 1550.99 1568.08 True False 1451.5710706942762 1426.7521402110722 1125.861816681065 1491.9853948819637 1145.7382015697124 1485.4833906342212 1493.7515518955418 1400.0662501163597 1247.4730625224827 1453.0602267063905 1375.2161008781122 1.0555221610388428 1.0374748661683446 0.8186799267127342 1.084909778128173 0.8331332078195768 1.0801817908368732 1.0861940541139254 1.0180699958518373 0.907110571004759 1.0566050134074003 1.0 10.425442625603662 -10.229139370084425 0.003168388228349903 5.9276790028733205e-06 1.9410415457074628 0.0 0.09766953790631266 175382.62334972288 160.91477032966304 49871.17924329063 48710.072707693194 5.900117082578486e-11 10.229139370084425 1.9410356180284598 SLPS(ph)PHPVR ddPTM_A549_MK2206_60min_R1 2 SLPSPHPVR 9 0 A0A087X0P0;Q02224-3;Q02224 A0A087X0P0 CENPE Kinesin-like protein;Centromere-associated protein E 1 S(0.002)LPS(0.998)PHPVR;S(0.002)LPS(0.998)PHPVR 73.781 0.00067786 8760600.0 759.39 1002.69 689.9300000000001 939.94 1451.9 1306.46 1158.58 987.99 1678.1100000000001 1756.26 1980.6200000000001 True False 887.5564666970278 1053.722638164737 787.7724483996589 1170.22534219551 1238.3274333202994 1444.7087300420399 1369.0789890975689 1128.0406080924777 1298.0207643910135 1359.5196462244564 1488.7773916688623 0.5961646594472468 0.7077771626982825 0.5291405234980068 0.786031107635059 0.8317747436587426 0.9703994285019178 0.919599529626712 0.7576959553556811 0.8718702820547147 0.9131785946188282 1.0 10.539912336806077 -4.212421302242453 0.2197810484932726 0.9846663816780885 1.8057233661697323e-17 0.6453011362817995 0.08557255904070254 8.345554903758108 0.22279987137469415 0.06465435404897989 2.4171123954910345 6.131668930034253e-05 4.212421302242453 -0.9846663816780885 SLPSSSQLKGS(ph)PQAISR ddPTM_A549_MK2206_60min_R1 3 SLPSSSQLKGSPQAISR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SLPS(0.004)S(0.004)S(0.017)QLKGS(0.971)PQAIS(0.003)R;S(0.005)LPS(0.024)S(0.025)S(0.066)QLKGS(0.878)PQAIS(0.001)R;SLPSSSQLKGS(0.999)PQAISR 80.844 7.0867e-05 205837000.0 13357.0 14896.2 16188.0 14291.7 18964.9 15422.5 14651.099999999999 14006.4 20796.6 20809.7 20083.9 True False 15611.335052703103 15654.352953185482 18483.70181713172 17793.1671415788 16175.18833265112 17054.498713373043 17313.015223089802 15991.850092801029 16086.203305345987 16108.774317035672 15096.513342558514 1.0341020273001222 1.0369515528499131 1.2243689253083625 1.1786275902143684 1.071451928376847 1.1296978531655242 1.1468221058886994 1.0593075188903702 1.0655575191655309 1.0670526333801527 1.0 13.881927765905404 -9.276022550192673 0.6549443084797578 1.00912028846489 1.1193857692342801 0.20684369215962428 0.05828344969224437 0.5120421639446913 0.48703878761488995 0.021327253583761925 0.015004913997394472 5.296359425000313e-10 9.276022550192673 0.11026548076939013 SLPSSSQLKGS(ph)PQAISR ddPTM_A549_PD325901_60min_R1 5 SLPSSSQLKGSPQAISR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SLPSSS(0.002)QLKGS(0.998)PQAISR;SLPSS(0.001)S(0.01)QLKGS(0.99)PQAISR;SLPSS(0.001)S(0.001)QLKGS(0.999)PQAISR;SLPSSSQLKGS(1)PQAISR;SLPSSSQLKGS(0.999)PQAIS(0.001)R 222.46 5.097899999999999e-64 387665900.0 51632.7 53110.17 52525.600000000006 51450.799999999996 64278.2 58777.100000000006 58678.5 65421.2 60157.1 61861.4 61050.0 True False 56874.41369401524 57585.95041605781 56090.30307809174 54628.79906275513 59763.52097975175 58298.43878508537 60911.54242760725 64116.32284406141 57628.9062889504 57955.4606466674 53541.237027835814 1.062254382812383 1.0755438912649546 1.0476093977606584 1.0203126056716603 1.1162147962453877 1.088851173811623 1.137656614021444 1.197512915339025 1.076346186379471 1.0824453050372493 1.0 15.708362851238403 -10.132385556646815 1.069188190162483 1.0087693639061455 1.090755848925556 0.06218272162991034 0.05043307591990443 0.4074244560820562 0.9312975468738787 0.01841776071304905 0.009207681938057268 7.372494264374733e-11 10.132385556646815 0.08198648501941053 SLPTTVPES(ph)PNYR ddPTM_A549_MK2206_60min_R1 3 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR 248.22 1.4794999999999997e-68 778215300.0 20615.8 20960.5 18869.0 15039.4 20302.899999999998 16178.5 12848.8 13289.4 22117.399999999998 21316.3 23242.5 True False 24095.243032081784 22027.299920465925 21544.907931026588 18724.053675144325 17316.370305088996 17890.498131580858 15183.26064243889 15173.213147080603 17107.844214230183 16500.933025186692 17470.745789633296 1.3791765573270087 1.2608105106501162 1.2331990969618938 1.071737514849235 0.991163772491275 1.024026011654101 0.8690676875081234 0.8684925835326394 0.9792280432803018 0.9444893322744089 1.0 14.092653574755479 -6.1571612949070404 1.173142627988064 0.9712376571446848 1.3604698620733673 0.8944493479656629 0.051352887735745666 0.14772921344815965 0.34342482389489964 0.008477406291016369 0.04687619800755451 6.963678383718734e-07 6.1571612949070404 0.3892322049286825 SLPTTVPES(ph)PNYR ddPTM_A549_PD325901_60min_R1 4 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 SLPT(0.002)T(0.002)VPES(0.996)PNYR;SLPTT(0.001)VPES(0.999)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR 194.86 2.7385e-30 1068244000.0 20261.0 21010.3 18451.699999999997 19137.699999999997 22325.100000000002 22035.399999999998 19417.3 20238.2 23148.7 22322.600000000002 25312.2 True False 22317.88180464014 22780.91171665426 19703.94332108583 20319.79226412979 20757.061993413903 21855.951008213597 20156.235977054264 19834.533224439245 22175.840640772676 20913.147226401266 22198.959867256104 1.0053570950213504 1.026215275529938 0.8876066013412425 0.915348844524102 0.9350466020721525 0.9845484265436935 0.9079810990056837 0.8934893050415198 0.9989585446065188 0.9420777978543293 1.0 14.438204460201131 -8.859085130014911 14.464092951502218 0.9995362651087475 0.9441200438131391 0.06794996891051919 0.0461215825691898 0.8498538485897806 121.85919406255556 0.007633793350793099 0.008125514517810826 1.3832952001098048e-09 8.859085130014911 -0.055416221295608414 SLQARPVS(ph)MPVDR ddPTM_A549_MK2206_60min_R1 1 SLQARPVSMPVDR 13 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 SLQARPVS(1)MPVDR 48.907 0.0071637 11899000.0 1855.0 2141.7 1793.6 1731.3 3074.9 1636.2 1768.1 1832.6 3041.7 3340.8 2729.8 True False 2168.078649604271 2250.703382059677 2047.9594501610718 2155.4685777210107 2622.5862832954 1809.3415979783408 2089.340883342896 2092.376662102122 2352.7598065967945 2586.110959713631 2051.915321352736 1.0566121452687207 1.0968792711074884 0.9980721079712703 1.050466632463179 1.278116234137014 0.8817818060764431 1.0182393306393789 1.0197188160390125 1.1466164232575276 1.260340001754421 1.0 11.002755479551883 -11.26138981882529 1.7761374542346207 0.9998821204966157 1.0732228284937517 0.0 0.12172610182862399 0.8360127252495256 4.758643864852813 0.06970491212927106 0.014079575797591785 5.477850572417999e-12 11.26138981882529 0.07334070799713599 SLQARPVS(ph)MPVDR ddPTM_A549_PD325901_60min_R1 4 SLQARPVSMPVDR 13 1 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 S(0.001)LQARPVS(0.999)MPVDR;SLQARPVS(1)MPVDR;SLQARPVS(1)MPVDR;SLQARPVS(1)MPVDR 104.44 3.1497e-05 69867000.0 7963.4 7852.700000000001 7457.200000000001 8174.5 8573.9 8504.9 8214.880000000001 9278.2 9241.6 9382.3 11153.0 True False 8771.83850565477 8514.47458805305 7963.290435786467 8679.420299363514 7971.698842349254 8435.638914190607 8527.501753754817 9093.139022392912 8853.2076905297 8789.899976806668 9781.251704692093 0.8968012244738468 0.8704892630427488 0.8141381774243122 0.8873527194070644 0.8149978226738822 0.8624293872474429 0.8718211136172022 0.929649833878716 0.905120117324329 0.8986477643336925 1.0 13.255803383029912 -9.811378462779297 0.38937548621004464 1.0141346190185412 0.8516799638394301 0.33350874842465916 0.04025542870065665 0.4794331451438656 0.14868068163551537 0.031130619013353324 0.01104240661364524 1.5439084253265518e-10 9.811378462779297 -0.16245465517911106 SLQEEQSRPPTAVSS(ph)PGGPAR ddPTM_A549_MK2206_60min_R1 2 SLQEEQSRPPTAVSSPGGPAR 21 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 SLQEEQS(0.001)RPPT(0.006)AVS(0.211)S(0.782)PGGPAR;SLQEEQSRPPT(0.022)AVS(0.187)S(0.792)PGGPAR 117.83 3.2855e-15 54460000.0 6403.1 6373.2 5082.799999999999 5773.799999999999 6834.400000000001 5876.8 5564.9 5980.299999999999 7708.700000000001 7597.700000000001 7903.0 True False 7483.786739235096 6697.568657861858 5803.617469490799 7188.381259195728 5829.068813474936 6498.679075295883 6575.970296767652 6828.025838900645 5962.691758264366 5881.3742931681845 5940.466988296094 1.259797715226707 1.1274481738653552 0.9769631715696903 1.2100700623971605 0.9812475727849957 1.0939677113094943 1.1069786785657805 1.149408935754246 1.0037412496377909 0.9900525168737855 1.0 12.53636063239135 -2.0000000000000027 0.1524446489009178 0.9740021127509528 1.7294802750152882 0.30915458845991406 0.07840319297713838 51.51938552587648 0.4875278827160156 0.13009501768938553 8.716373067503646 0.00999999999999994 2.0000000000000027 0.7554781622643354 SLQLPASPAPDPS(ph)PRPAYK ddPTM_A549_PD325901_60min_R1 2 SLQLPASPAPDPSPRPAYK 19 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 SLQLPAS(0.004)PAPDPS(0.996)PRPAYK;SLQLPASPAPDPS(1)PRPAYK 100.64 7.01e-10 6727500.0 3284.2 3454.9 4040.5 3412.1 4747.299999999999 3801.7 3441.8 3907.4 4228.7 4099.299999999999 4231.1 True False 3617.609566299744 3746.056547972605 4314.7126275003 3622.8576675586573 4413.8660252959135 3770.7402156496196 3572.7795824252266 3829.463841703999 4050.9824447003707 3840.4694984090856 3710.701523152759 0.9749125721181907 1.009527854665553 1.1627754484101835 0.9763268872352023 1.1894963789881214 1.0161798765333865 0.9628313029579516 1.0320053547315051 1.0917025849221351 1.0349712781927205 1.0 11.857476244634375 SLQTT(ph)SPPVVAPGNENGLAVPVPLRK ddPTM_A549_MK2206_60min_R1 1 SLQTTSPPVVAPGNENGLAVPVPLRK 26 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.003)LQT(0.081)T(0.458)S(0.458)PPVVAPGNENGLAVPVPLRK 90.12299999999999 1.0264e-08 3122800.0 733.4 1213.2 1245.2 831.5 1465.6 1003.8 1021.2 965.89 1494.1 1784.8 1458.7 True False 857.1799900915212 1274.9466980038292 1421.7880839320733 1035.2175373274533 1250.0121814685806 1110.0214497314867 1206.738821373092 1102.807865414066 1155.6887355874255 1381.6124404025647 1096.4645319280676 0.7817671845565504 1.1627796986391445 1.2967023032035006 0.9441413809410552 1.1400388658906355 1.0123642100666768 1.1005726006030616 1.005785260992295 1.0540137888046555 1.2600612242085767 1.0 10.098643429606483 -10.001399441683091 0.41083964846636817 0.993705285039831 1.0718454969483657 0.0 0.14675075626833 4.328092540062512 1.365838151487084 0.13934435751628413 0.04143599646225505 9.967828525867877e-11 10.001399441683091 0.0781402119085347 SLQTT(ph)SPPVVAPGNENGLAVPVPLRK ddPTM_A549_PD325901_60min_R1 1 SLQTTSPPVVAPGNENGLAVPVPLRK 26 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.004)LQT(0.098)T(0.449)S(0.449)PPVVAPGNENGLAVPVPLRK 98.839 1.4162e-09 4608700.0 1871.0 1720.1 1996.5 2063.9 2886.9 2848.2 2203.9 2789.6 2517.4 2406.0 2429.5 True False 2060.9425426425983 1865.0588636914756 2131.994495929797 2191.3824155430116 2684.1341032643313 2825.0052035177 2287.7706205203563 2733.9592396011353 2411.602432494315 2254.0847493894703 2130.686901869403 0.9672667255026476 0.8753322048655422 1.0006136960147671 1.0284863597839533 1.2597506001042902 1.325865945409024 1.073724449384437 1.2831351416308228 1.1318427078039692 1.057914584921793 1.0 11.05710289359356 -6.257140904045811 2.5550150565070733 1.113052211908558 0.9284049239648373 0.4021034405372079 0.10576341113591674 0.2908767813532295 3.7145519180467548 0.01756512585324719 0.05188044609451176 5.531706074595751e-07 6.257140904045811 -0.18464728794372065 SLQTTS(ph)PPVVAPGNENGLAVPVPLRK ddPTM_A549_PD325901_60min_R1 1 SLQTTSPPVVAPGNENGLAVPVPLRK 26 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.002)LQT(0.037)T(0.145)S(0.815)PPVVAPGNENGLAVPVPLRK 110.9 5.9895e-13 4585800.0 1265.8 1316.1 1605.9 1506.7 1486.7 1618.0 1941.8 1333.8 1216.0 1533.1 1826.8 True False 1394.3030841672912 1427.0123658533519 1714.8860310611894 1599.765437036026 1382.279320836566 1604.82354444619 2015.696261593732 1307.1963126541423 1164.8957487539076 1436.2998043595173 1602.1151810393192 0.8702889159709374 0.8907052269036143 1.070388728199126 0.9985333488933243 0.8627839853186199 1.0016904923184824 1.2581469081930277 0.8159190600804007 0.7270986272024588 0.8965022124238068 1.0 10.645762155967267 SLRNS(ph)LK ddPTM_A549_MK2206_60min_R1 1 SLRNSLK 7 1 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 SLRNS(1)LK 79.986 0.0044818 602280000.0 6852.9 7796.3 8143.6 5867.3 8841.5 5536.9 5757.1 6236.8 8573.1 7986.0 8575.4 True False 8009.501982680915 8193.098369310292 9298.484934395461 7304.788763393109 7540.927062264229 6122.811082903237 6803.090548890551 7120.885499398945 6631.3065384275205 6181.957053482118 6445.891511000168 1.2425747422233813 1.2710574410581448 1.4425444360221127 1.1332472398778661 1.1698811637452073 0.9498780847388477 1.0554149937647583 1.104716932831847 1.028764838364241 0.9590538473898241 1.0 12.65416419166656 -6.735082615126324 1.7819832004183134 1.0221684131177797 1.3092064565692052 0.732868301226234 0.07414721957950585 0.12053158160857154 0.7752692133128806 0.010115541068622844 0.024731000262586973 1.8404218677367946e-07 6.735082615126324 0.2870380434514255 SLRNS(ph)LK ddPTM_A549_PD325901_60min_R1 3 SLRNSLK 7 1 Q92887 Q92887 ABCC2 Canalicular multispecific organic anion transporter 1 1 SLRNS(1)LK;SLRNS(1)LK;SLRNS(1)LK 95.523 0.0033139000000000003 1797508000.0 15857.599999999999 16224.7 17380.4 17995.2 17996.1 16605.2 17453.1 17567.1 16745.800000000003 17952.9 18882.800000000003 True False 17467.451878251868 17592.012409589595 18559.9384608356 19106.72263393555 16732.116019174635 16469.97275663652 18117.287271202782 17216.71040937666 16042.032261088145 16819.35083013893 16560.335307931502 1.054776461554248 1.062298080472077 1.120746537779727 1.1537642371760715 1.0103730213216673 0.9945434346820441 1.0940169347009288 1.0396353750839085 0.9687021405541759 1.0156407172554878 1.0 14.015444263871744 -7.883599652133105 0.7175584463117608 0.9855118153238709 1.0880794068800055 0.32842772732467684 0.04475763021618148 0.44407958841708706 0.4636909113926873 0.010137328155809427 0.017625872929620034 1.3073755173615165e-08 7.883599652133105 0.1025675915561346 SLRNS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SLRNSPK 7 1 Q6AI39 Q6AI39 GLTSCR1L GLTSCR1-like protein 1 S(0.001)LRNS(0.999)PK 47.603 0.016472999999999998 3578900.0 1093.7 823.27 775.7 949.06 1561.1 974.13 1265.2 1195.2 1348.8 1380.9 1643.1 True False 1278.2898216022593 865.1709265295185 885.7059241134834 1181.5797426049226 1331.464257976665 1077.2117900248393 1495.0704629859342 1364.623260146488 1043.2989535910035 1068.9537309232985 1235.0729227469706 1.034991374241424 0.7005018979812628 0.7171284446456431 0.956688241514459 1.07804505584602 0.8721847675430965 1.210511894035126 1.1048928650394019 0.8447266022726532 0.8654984748153977 1.0 10.270380510423076 -6.339662641415039 8.407973029108458 0.9669192808617404 0.8060867810108036 0.23551229775587035 0.13400849585238964 0.3961070926451137 39.42610039936184 0.01933468570106109 0.04505201030527805 4.574433922224291e-07 6.339662641415039 -0.16083249985093684 SLRQS(ph)FRR ddPTM_A549_MK2206_60min_R1 1 SLRQSFRR 8 2 J3QRV5;Q6P1M3;Q6P1M3-2;A0A087WW77;Q15334 J3QRV5;A0A087WW77 LLGL2;LLGL1 Lethal(2) giant larvae protein homolog 2;Lethal(2) giant larvae protein homolog 1 1 SLRQS(1)FRR 58.63 0.0046648 65118000.0 2396.0 3189.6 3075.9 2421.2 3907.2 2746.6 2310.7 1957.6 4051.2 4475.4 4151.4 True False 2800.3862234241687 3351.937016116891 3512.1088719616646 3014.3941086917966 3332.4560558365406 3037.243388954476 2730.524279814733 2235.0957948985656 3133.6096684370355 3464.4040316997116 3120.4928071887152 0.8974179389142916 1.0741691211064466 1.1254981469179415 0.9659993773251142 1.0679262096549376 0.9733217080191767 0.8750298265467533 0.7162637227522364 1.004203458254447 1.1102105487052314 1.0 11.607558170911126 -7.374104838023615 7.303532966866538 0.9656273708786359 1.0308930638943523 0.10512842234340092 0.10795708869078717 0.5752085713155249 33.53675984234245 0.016060468781194995 0.02571551329438722 4.225665950227923e-08 7.374104838023615 0.06526569301571639 SLRQS(ph)FRR ddPTM_A549_PD325901_60min_R1 2 SLRQSFRR 8 2 J3QRV5;Q6P1M3;Q6P1M3-2;A0A087WW77;Q15334 J3QRV5;A0A087WW77 LLGL2;LLGL1 Lethal(2) giant larvae protein homolog 2;Lethal(2) giant larvae protein homolog 1 1 SLRQS(1)FRR;S(0.001)LRQS(0.999)FRR 61.833 0.0034955999999999997 214410000.0 9788.7 9697.3 8358.2 8933.3 10692.2 10225.7 10535.5 10870.6 9085.8 9931.7 10836.5 True False 10782.441617939923 10514.525503677307 8925.437713939615 9485.089652003671 9941.216758087538 10142.42528952003 10936.434217746804 10653.777355179278 8703.955422720608 9304.610767045473 9503.679198233292 1.134554459702759 1.1063636813027031 0.939156039231504 0.9980439632018433 1.046038755173426 1.0672104011471135 1.150757931705003 1.1210160962882445 0.9158511394554069 0.9790535405251447 1.0 13.21427042268111 -8.764729816268892 24.999963909709265 0.9602630372167414 1.066566492383921 0.36696881944777304 0.06143307493098865 72.38530476034134 549964.0908065251 0.011913553805848241 0.012938315228786587 1.7189774666095596e-09 8.764729816268892 0.10630345516717965 SLS(ph)AIDR ddPTM_A549_MK2206_60min_R1 2 SLSAIDR 7 0 O95831-3;O95831;O95831-6;O95831-4 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 1 S(0.021)LS(0.979)AIDR;SLS(1)AIDR 95.50200000000001 0.011887 118192000.0 1892.7 2288.6400000000003 2112.4300000000003 1331.85 2147.84 2090.48 1847.12 1819.68 2796.38 2634.59 2899.16 True False 2212.1414879277654 2405.1220004281918 2412.004338371851 1658.153309789019 1831.8955812264435 2311.693206051683 2182.717794491449 2077.6252125362817 2163.004394901254 2039.4342891977776 2179.218559254524 1.015107676342709 1.1036625905255442 1.1068207583533796 0.7608935334858047 0.8406204019541326 1.0607899773221812 1.0016057293666414 0.9533808363154747 0.9925596428662866 0.935855782127441 1.0 11.0895951798494 SLS(ph)AIDR ddPTM_A549_PD325901_60min_R1 1 SLSAIDR 7 0 O95831-3;O95831;O95831-6;O95831-4 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 1 SLS(1)AIDR 98.23299999999999 0.011541 84725000.0 2179.0 1784.6 1804.4 2022.4 2238.9 2164.6 2042.9 2255.2 2252.6 2154.9 2345.2 True False 2400.210475904983 1934.9945050542453 1926.8574347386573 2147.3190547963495 2081.6473877856924 2146.972215270843 2120.643677417774 2210.218266829825 2157.9310556275104 2018.8392462424658 2056.755267447674 1.1669888556471373 0.9407995864551607 0.9368433207562836 1.0440323595043275 1.0121026165494682 1.0438637251845346 1.0310627185359695 1.0746141273154926 1.0491919431451804 0.9815651274581345 1.0 11.006154422985386 SLS(ph)APGNLLTK ddPTM_A549_MK2206_60min_R1 2 SLSAPGNLLTK 11 0 Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4;F5GZ00 Q96RR4-6 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 1 S(0.076)LS(0.924)APGNLLTK;S(0.121)LS(0.879)APGNLLTK 91.914 1.6339e-05 1404500.0 2042.8 2613.1 2696.5 2723.0 3010.9 2302.1 1972.1 2297.8 3651.4 3527.0 3801.6 True False 2387.574698335097 2746.0956285474804 3078.9042469666215 3390.135122240116 2568.0005985151106 2545.7066939896963 2330.4050427241255 2623.520186717373 2824.3637300876294 2730.248250392117 2857.5578011775815 0.8355298000800517 0.9609939044507977 1.077460006477498 1.1863749950545401 0.8986696953100489 0.8908679617751307 0.8155233261646642 0.9180987294941984 0.9883837621495275 0.955448127511891 1.0 11.480566965474148 -4.329325395031143 15.630121236393663 0.9748448763799976 0.9653733987633074 0.0 0.103364304294442 0.0 0.0 0.013790456422118586 0.0 4.684622553940545e-05 4.329325395031143 -0.009471477616690205 SLS(ph)APLHPEFEEVYR ddPTM_A549_MK2206_60min_R1 1 SLSAPLHPEFEEVYR 15 0 Q53HC0-2;Q53HC0 Q53HC0-2 CCDC92 Coiled-coil domain-containing protein 92 1 S(0.169)LS(0.831)APLHPEFEEVYR 94.20299999999999 6.9682000000000005e-06 3549100.0 175.74 373.96 458.07 384.99 443.55 399.77 364.16 370.71 532.43 609.93 650.38 True False 205.40061556951724 392.99296668769495 523.0312139469681 479.3125672828576 378.3043825671319 442.0733960541511 430.3231582366096 423.25927775176115 411.8354551159979 472.14638938521813 488.8726964251566 0.4201515385733202 0.8038758751745092 1.0698720091581981 0.9804445426954568 0.7738300488725451 0.9042709876963435 0.8802356142679147 0.8657862892462834 0.842418605349639 0.965785966035231 1.0 8.933315022750163 -5.307052395128956 3.438861865592719 0.9169661621653463 0.3805648900087873 0.768452597597604 0.07892159001882366 0.09909066544538472 1.9791598477284562 0.011879811825563073 0.12822164569280148 4.93114308963686e-06 5.307052395128956 -0.536401272156559 down SLS(ph)APLHPEFEEVYR ddPTM_A549_PD325901_60min_R1 2 SLSAPLHPEFEEVYR 15 0 Q53HC0-2;Q53HC0 Q53HC0-2 CCDC92 Coiled-coil domain-containing protein 92 1 S(0.214)LS(0.786)APLHPEFEEVYR;S(0.224)LS(0.776)APLHPEFEEVYR 107.98 1.2066e-06 11641000.0 651.5799999999999 498.86 512.74 669.19 693.75 603.06 684.67 883.13 650.54 582.65 1105.5 True False 717.727921932156 540.9006829493223 547.5376197560954 710.5243464592409 645.0233933075724 598.1488793039055 710.7254915158001 865.5152793479178 623.2000661137884 545.8613795643289 969.5305083418915 0.740283999066339 0.5578996001625368 0.5647451163682349 0.7328540364081914 0.6652945809933336 0.6169469389125984 0.7330615028621384 0.8927158783565642 0.6427854108269334 0.5630161968784982 1.0 9.921142486292501 -14.99999999999919 0.2249285556497707 2.7711677155272123 0.6310729063143103 0.0 0.15762725311618334 19.93613433303983 0.24738932861415228 15.631936516088286 0.05692918544194458 1.0000000000018651e-15 14.99999999999919 -2.140094809212902 SLS(ph)ASPALGSTK ddPTM_A549_MK2206_60min_R1 2 SLSASPALGSTK 12 0 O95544;O95544-2 O95544 NADK NAD kinase 1 S(0.024)LS(0.629)AS(0.348)PALGSTK;S(0.233)LS(0.668)AS(0.099)PALGSTK 208.27 2.2334e-31 28502000.0 10246.9 11462.599999999999 11233.400000000001 10668.400000000001 14256.8 11843.5 10088.900000000001 10868.900000000001 15995.7 15226.099999999999 14881.0 True False 11976.32620734771 12045.997379276863 12826.465035369867 13282.158478922669 12159.64360586876 13096.771308920974 11921.922537163133 12409.599859610245 12372.699489884064 11786.513435014293 11185.637005293453 1.0706879010717114 1.0769165290788765 1.1466906202391438 1.1874297791567048 1.087076542901792 1.1708560990065298 1.065824193250795 1.1094227225268949 1.1061238161071067 1.053718570470013 1.0 13.449359797610265 -10.58908030256447 0.5066531129791839 0.9799314140505536 1.1195936824277106 0.37711907033046965 0.041065996560534744 0.8060270401348701 0.2979132901764043 0.054402937007187 0.009339393579537728 2.5758448302733437e-11 10.58908030256447 0.139662268377157 SLS(ph)ASPALGSTK ddPTM_A549_PD325901_60min_R1 1 SLSASPALGSTK 12 0 O95544;O95544-2 O95544 NADK NAD kinase 1 SLS(0.984)AS(0.016)PALGSTK 164.64 2.349e-14 9798100.0 4017.4 4105.9 4495.6 4952.6 4903.7 5524.7 5732.1 5790.0 5601.6 5361.1 5022.0 True False 4425.243490546434 4451.918602657302 4800.698450238917 5258.510853829314 4559.28102884662 5479.708674908448 5950.238202225478 5674.513907832871 5366.184232088723 5022.599231068951 4404.325837080936 1.004749342859556 1.010805913853074 1.0899962055079662 1.1939422850046235 1.0351824995464876 1.2441651407290624 1.350998636869503 1.288395572384304 1.2183894722115471 1.1403786678956953 1.0 12.104705489747774 -5.90402591283337 3.165661221500157 1.1462771321434262 1.0057582260714522 0.26694621103438765 0.10143453590150167 0.36306900518497387 7.168973323331115 0.01805373988637892 0.06674662532016151 1.2473090894500635e-06 5.90402591283337 -0.14051890607197404 SLS(ph)DPIPQR ddPTM_A549_MK2206_60min_R1 2 SLSDPIPQR 9 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.033)LS(0.967)DPIPQR;S(0.158)LS(0.842)DPIPQR 72.607 0.0025738000000000002 14814400.0 1609.13 1905.03 1505.56 1293.31 2036.44 1674.13 1687.6 1699.67 2706.7 2219.7799999999997 2463.7 True False 1880.7118045486359 2001.9878899589785 1719.0710469360533 1610.171008058892 1736.8823736557563 1851.285325402445 1994.2150753517742 1940.6034275210702 2093.6367717117228 1718.3301562958356 1851.8952953391224 1.0155605499306788 1.081048099748194 0.9282765884565055 0.8694719469893327 0.9378944792543983 0.9996706239611859 1.0768508783249486 1.0479012676392718 1.1305373349027987 0.92787651689626 1.0 10.854786816756326 -7.604716322814644 4.122612247430853 1.0628882561448636 0.96542911970944 0.13857707131685815 0.07039088097156 0.2145725276752244 7.0090464205224485 0.010882027800414616 0.01644485316886552 2.484755594979727e-08 7.604716322814644 -0.09745913643542359 SLS(ph)DPIPQR ddPTM_A549_PD325901_60min_R1 1 SLSDPIPQR 9 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.009)LS(0.991)DPIPQR 83.883 0.0013976 9595500.0 1733.1 1422.3 1461.4 1420.1 2040.0 1468.2 1456.9 1684.0 1522.3 1770.9 2057.8 True False 1909.0430361592134 1542.1622125622846 1560.5793921120994 1507.8163517188964 1896.717437617944 1456.2434659801581 1512.3431267462709 1650.4112989275557 1458.32302494085 1659.0850717763146 1804.7036454689674 1.0578152490311685 0.854523797541031 0.864728896641958 0.8354924951276849 1.0509855412438456 0.8069155673488658 0.8380008155595408 0.9145054386470652 0.8080678667670628 0.9193116420758309 1.0 10.81754623295749 -11.070392287270728 1.4013292245962028 0.9996815811342279 0.879834023714967 0.041974350752276623 0.08679043110982124 0.5158771767679136 1.8160053765837536 0.05739213971738683 0.012824937766787477 8.503695737621744e-12 11.070392287270728 -0.1198475574192609 SLS(ph)DS(ph)ESDDSK ddPTM_A549_PD325901_60min_R1 1 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 S(0.252)LS(0.749)DS(0.887)ES(0.011)DDS(0.102)K 123.26 8.0886e-06 31704000.0 6091.9 6463.4 5690.3 5055.2 5819.7 4938.3 5290.1 5575.2 5332.3 5455.4 6059.0 True False 6710.345203380246 7008.093401304274 6076.4779765536305 5367.448222807809 5410.944348875071 4898.084122088145 5491.417650353796 5463.998262340212 5108.201974572747 5110.945112975611 5313.78141116555 1.262819202400794 1.3188524064197602 1.143531791463132 1.0100995519931422 1.018285083670427 0.9217699681428514 1.0334293463436393 1.0282692944160292 0.9613120260910939 0.961828257036744 1.0 12.375523166703216 -6.049792355772394 2.18656329098331 0.9869425412179127 1.2954628937151835 0.9166651154797627 0.03515639999973593 0.05637202307001153 0.5193186754030779 0.004811099955775972 0.018321440142873076 8.916771635832186e-07 6.049792355772394 0.30852035249727083 SLS(ph)DSES(ph)DDSKSK ddPTM_A549_PD325901_60min_R1 1 SLSDSESDDSKSK 13 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 S(0.26)LS(0.67)DS(0.092)ES(0.836)DDS(0.119)KS(0.023)K 65.949 0.0015050999999999999 31728000.0 7139.0 7014.2 6716.9 6705.8 8416.4 7968.8 7655.8 8074.4 7631.1 7565.4 8269.0 True False 7863.746024545967 7605.31125033704 7172.749226000934 7120.002036023221 7825.26109900375 7903.90473484722 7947.145658414509 7913.349757755734 7310.391404865088 7087.719352880757 7251.965421509809 1.0843606619002313 1.048724146943556 0.9890765894616769 0.9818030867749071 1.0790538349498342 1.0898982931446028 1.095860942034107 1.091200701851696 1.0080565722475707 0.977351509682894 1.0 12.824156330767979 -8.875677954659487 8.472438615534415 1.0035597198629553 1.0554356248398538 0.3393567679358538 0.03822093870728931 0.26311528364320225 18.62253722152617 0.007182607308527288 0.007633639113455256 1.3314413647736473e-09 8.875677954659487 0.051875904976898424 SLS(ph)DSESDDS(ph)KSK ddPTM_A549_PD325901_60min_R1 1 SLSDSESDDSKSK 13 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 S(0.026)LS(0.753)DS(0.288)ES(0.4)DDS(0.444)KS(0.089)K 60.306999999999995 0.0023801 28791000.0 7423.9 7779.2 7096.5 7014.1 8596.6 8548.2 7231.1 8519.6 8522.3 8107.4 8078.8 True False 8177.568862813679 8434.780485104773 7578.111164721168 7447.345026823116 7992.804472660006 8478.586293346674 7506.283467509749 8349.669894503091 8164.137368096567 7595.497380382457 7085.15881573267 1.15418285962134 1.1904857328498064 1.0695753421777776 1.0511189968369106 1.1281051957384356 1.196668488858695 1.0594375740515467 1.1784732158667441 1.1522871371588757 1.0720292343365085 1.0 12.790584476563602 -10.748863018358719 0.9399625487125358 0.997907122578881 1.130634781290148 0.2929557671408718 0.05304894043214034 0.4035416278323406 0.6175836326158255 0.03688090547914265 0.008873595615400498 1.782941039564312e-11 10.748863018358719 0.13272765871126702 SLS(ph)DSESDDSK ddPTM_A549_MK2206_60min_R1 8 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.014)LS(0.985)DS(0.001)ESDDSK;S(0.012)LS(0.98)DS(0.008)ESDDSK;S(0.017)LS(0.983)DSESDDSK;S(0.001)LS(0.984)DS(0.014)ESDDSK;S(0.018)LS(0.981)DSESDDSK;S(0.005)LS(0.954)DS(0.04)ESDDSK;S(0.001)LS(0.996)DS(0.002)ES(0.001)DDSK;S(0.082)LS(0.917)DS(0.001)ESDDSK 335.12 2.852999999999999e-172 2443272700.0 54647.1 62900.450000000004 53788.799999999996 58398.770000000004 80462.6 65588.08 61882.509999999995 64608.049999999996 95051.06 91577.99999999999 91642.80000000002 True False 63870.194486678985 66101.8142354558 61416.86065612393 72706.47127162032 68626.65812816157 72528.56709175617 73125.76104681603 73766.43894135494 73522.14667535268 70890.46619631679 68885.36354738983 0.9271954330725038 0.9595915711467634 0.8915807000695013 1.055470531437375 0.9962444065632274 1.0528879192436864 1.061557307402595 1.070857946341637 1.0673115868042558 1.0291078183473263 1.0 16.071909857678612 -6.267941149377944 24.9946070582154 1.0375751881355546 0.9294694671314638 0.7698065277684946 0.028061230856237337 215.7976337352939 829586.9473003023 0.004687932092027855 0.011138400712931446 5.395837357790436e-07 6.267941149377944 -0.10810572100409077 SLS(ph)DSESDDSK ddPTM_A549_PD325901_60min_R1 4 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.01)LS(0.981)DS(0.009)ESDDSK;SLS(1)DSESDDSK;SLS(0.996)DS(0.004)ESDDSK;SLS(0.73)DS(0.27)ESDDSK 326.21 4.619199999999998e-150 2973506100.0 35407.0 34971.5 35567.1 34804.4 42797.4 37768.0 35359.5 37092.5 39509.100000000006 39256.799999999996 42713.4 True False 39001.49257474422 37918.67103748991 37980.897288346976 36954.18874147254 39791.45826701479 37460.429929940496 36705.125121960824 36352.66098899667 37848.66992359626 36778.1189483926 37459.922582551364 1.041152514098118 1.012246380219489 1.0139075222231848 0.9864993356576132 1.062240803603514 1.000013543738325 0.9798505333552899 0.9704414340121875 1.0103776867180705 0.9817991179064437 1.0 15.193060297553135 -7.448452598951101 24.999997533124112 0.9997380296517433 1.021152365537429 0.31872904739746166 0.021552855218948133 173.23749317094524 58190.42285971029 0.0031356194963729073 0.005012634074816757 3.5607985223227733e-08 7.448452598951101 0.021414335885685754 SLS(ph)DSESDDSKSK ddPTM_A549_MK2206_60min_R1 2 SLSDSESDDSKSK 13 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.999)DS(0.001)ESDDSKSK;SLS(0.992)DS(0.007)ESDDSKSK 190.27 1.2197e-25 24270000.0 3193.1 4660.5 5222.1 4213.200000000001 5568.4 2371.1 2090.6800000000003 1928.3600000000001 7466.0 8046.1 8093.3 True False 3732.017216200215 4897.699543395023 5962.672304129201 5245.434189137737 4749.295736414875 2622.008228191204 2470.5294937997432 2201.710935354821 5774.962920752107 6228.480421740858 6083.510246283283 0.6134644415993692 0.8050778818671785 0.9801368063400718 0.8622380791324272 0.7806834449430663 0.4310025169749847 0.40610262723057167 0.3619145602162756 0.9492813666715392 1.0238300207591735 1.0 12.57068829806331 -8.959310913723987 24.585070333041042 0.9776243115423326 0.6655715783541991 0.3862969467537002 0.18835336816295958 108.73821892094782 65701.87612090088 0.03650021465365482 0.0388096658986378 1.0982193368849446e-09 8.959310913723987 -0.31205273318813354 SLS(ph)DSESDDSKSK ddPTM_A549_PD325901_60min_R1 3 SLSDSESDDSKSK 13 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.971)DS(0.029)ESDDSKSK;SLS(0.867)DS(0.127)ES(0.006)DDSKSK;SLS(0.63)DS(0.37)ESDDSKSK 233.86 2.9465e-47 309580000.0 16889.5 19546.5 17000.6 20786.8 21506.899999999998 34474.3 24697.6 29658.4 26580.7 25958.6 27688.4 True False 18604.109606607242 21193.752153447713 18154.362948912665 22070.75342575195 19996.329538777114 34193.55273071774 25637.48068304528 29066.83994543531 25463.605615874167 24319.569565877617 24282.902331228972 0.7661402806320012 0.8727849687964002 0.7476191561156711 0.9089009676313654 0.8234736221403354 1.4081328609036654 1.0557832145984567 1.197008477362031 1.0486228239334783 1.0015100021467158 1.0 14.567653244661658 SLS(ph)EEKEDHSDGLAGLK ddPTM_A549_MK2206_60min_R1 2 SLSEEKEDHSDGLAGLK 17 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.004)LS(0.996)EEKEDHSDGLAGLK;S(0.455)LS(0.519)EEKEDHS(0.026)DGLAGLK 194.24 7.6625e-42 13219500.0 5556.5 6642.400000000001 5232.2 5095.4 7127.0 4959.2 4796.4 5401.1 8056.7 8541.8 8523.8 True False 6494.301356617863 6980.469788015684 5974.204636001767 6343.773228741197 6078.627741079811 5483.979252349461 5667.843794392771 6166.722465175035 6231.870313906166 6612.201447462256 6407.10521508772 1.0136092882203354 1.0894888648898382 0.9324342952779141 0.9901153509704529 0.9487323115539922 0.8559215227862275 0.8846184983892406 0.9624818475984096 0.9726499104823652 1.0320107483004284 1.0 12.645456966757662 -5.76377197708012 24.999914087509524 0.9645413225042653 1.0515490814399242 0.33683113861359537 0.05123833420789423 54.00498444766293 578838.7199794083 0.007392173471167416 0.024703538527737014 1.7227728659843905e-06 5.76377197708012 0.08700775893565893 SLS(ph)EEKEDHSDGLAGLK ddPTM_A549_PD325901_60min_R1 2 SLSEEKEDHSDGLAGLK 17 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.003)LS(0.997)EEKEDHSDGLAGLK;S(0.168)LS(0.832)EEKEDHSDGLAGLK 160.57 7.0473e-23 36913000.0 7752.6 8265.0 8929.2 7953.3 10320.4 9229.8 9319.3 8948.5 8948.5 10220.0 10419.400000000001 True False 8539.638244837524 8961.520556020021 9535.189207641555 8444.557277745162 9595.530707447166 9154.635568930438 9673.951061216632 8770.015147537557 8572.425664246997 9574.707455843884 9137.879854018542 0.9345316836357911 0.9807001951419876 1.0434793803344098 0.9241265383929863 1.0500828267322166 1.0018336545434583 1.058664724833556 0.9597428821173207 0.9381197609505803 1.04780404303885 1.0 13.15764375859922 -2.1199589016227858 17.287691993965716 0.9818275229238254 0.08808201955151196 0.0 0.049920618589006364 0.0 0.0 0.006078004466983324 0.0 0.007586493645264411 2.1199589016227858 -0.8937455033723134 SLS(ph)ELESLK ddPTM_A549_PD325901_60min_R1 3 SLSELESLK 9 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 S(0.003)LS(0.995)ELES(0.002)LK;S(0.002)LS(0.998)ELESLK;S(0.002)LS(0.998)ELESLK 93.258 0.00098166 2836260.0 2341.52 3117.11 2956.52 2508.24 3740.0200000000004 2578.17 2412.56 2373.83 3181.26 3052.5299999999997 3056.1099999999997 True False 2579.229386664081 3379.799799198498 3157.16722619903 2663.1682881736515 3477.3338975685588 2557.1742383095384 2504.3712910034887 2326.4820984163894 3047.5627053296507 2859.7927348519697 2680.227844277463 0.9623172120127685 1.2610121211951015 1.1779473274781012 0.9936350351182883 1.2974023477119647 0.9540883786314451 0.9343874612565328 0.8680165394832555 1.1370535948413796 1.0669961290633907 1.0 11.388139933045546 -7.294874512380835 24.99594256952296 1.0320592938626107 1.1394188167306423 0.2444276752686434 0.116637573068824 917.1959088540026 685688.9866309017 0.018087679444982494 0.028916548062120698 5.0713722233827076e-08 7.294874512380835 0.10735952286803152 SLS(ph)ELESLKLPAESNEK ddPTM_A549_MK2206_60min_R1 4 SLSELESLKLPAESNEK 17 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 S(0.006)LS(0.994)ELESLKLPAESNEK;S(0.141)LS(0.859)ELESLKLPAESNEK;S(0.002)LS(0.998)ELESLKLPAESNEK;S(0.01)LS(0.989)ELESLKLPAESNEK 127.35 1.7041e-12 20589700.0 11450.84 11501.2 11514.1 10818.5 15229.9 11496.2 10055.4 10316.2 15527.0 15790.3 16738.5 True False 13383.461845840742 12086.561954402932 13146.972516224132 13469.032985660913 12989.601884926527 12712.720253440048 11882.336020794164 11778.552942037486 12010.159291523956 12223.26026316037 12581.868490901446 1.0637101997623777 0.9606333084106948 1.0449141576810583 1.0705113469752936 1.0324064263046409 1.0104000262467554 0.9444015433309331 0.9361529212100034 0.9545608667114173 0.9714980149410715 1.0 13.619058567457087 -7.562672088175411 5.294549438427768 0.971848530536946 1.0320200942628608 0.5424552630937753 0.03145721415859562 0.1455780680662142 9.964490071346765 0.005307379694472761 0.00800040979531023 2.737334756826243e-08 7.562672088175411 0.06017156372591481 SLS(ph)ELESLKLPAESNEK ddPTM_A549_PD325901_60min_R1 2 SLSELESLKLPAESNEK 17 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 S(0.011)LS(0.989)ELESLKLPAESNEK;SLS(0.999)ELESLKLPAESNEK 192.63 1.4580000000000002e-40 40471000.0 7833.7 8304.8 8963.6 8544.0 9104.900000000001 8620.3 9185.3 9901.3 8857.6 8267.8 9208.8 True False 8628.971457134856 9004.674641698137 9571.92379850555 9071.743475168127 8465.403234199805 8550.099134851354 9534.851617889022 9703.810804080416 8485.345875133726 7745.769697008424 8076.175979392864 1.0684476761220287 1.1149676114877172 1.1852049562725266 1.1232721399726242 1.0481944989559528 1.0586816281205054 1.1806146426499509 1.20153533415327 1.050663816239876 0.9590887713160903 1.0 12.979456631912862 -8.95566528305005 7.15961836551121 1.0220534546209665 1.1222382907739321 0.5016725559060524 0.05275077036827835 0.14318501920572535 17.517065471351493 0.009361752921638739 0.009827088338415611 1.107477003459663e-09 8.95566528305005 0.10018483615296558 SLS(ph)ES(ph)SVIMDR ddPTM_A549_PD325901_60min_R1 1 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 2 S(0.078)LS(0.9)ES(0.673)S(0.35)VIMDR 70.488 0.0034698999999999997 1466100.0 527.44 425.08 346.93 524.75 401.3 377.61 402.13 607.17 333.22 405.81 383.87 True False 580.9853205191943 460.9029834183899 370.4747560595666 557.1626157062819 373.11407240984335 374.53486935619657 417.4332772039792 595.0595180343493 319.2159222037641 380.18708734403225 336.6564235524214 1.725751477986363 1.3690604164177542 1.1004535489039295 1.654988815680581 1.1082933409459959 1.1125136582991026 1.239938548622346 1.7675572970069628 0.9481949544742857 1.1293029354149027 1.0 8.395133182121162 -2.000000000019623 0.11158914072123932 0.7812171402681931 3.1279247754620116 0.17574815817464828 0.257808870638841 79.48920615441287 0.5968860321264154 1.1801072381605355 28.92424053380765 0.009999999999548164 2.000000000019623 2.3467076351938188 SLS(ph)ESAATR ddPTM_A549_MK2206_60min_R1 2 SLSESAATR 9 0 O14924-5;O14924-4;O14924;E9PBG5 O14924-5 RGS12 Regulator of G-protein signaling 12 1 S(0.002)LS(0.976)ES(0.022)AATR;S(0.009)LS(0.985)ES(0.006)AATR 111.27 0.00032741 40837000.0 4897.8 5821.1 4501.6 4783.2 6033.3 4356.2 4596.200000000001 4767.4 6603.1 6807.9 7341.2 True False 5724.428900286684 6117.369126071621 5139.994570051897 5955.084214726007 5145.809562264185 4817.170192588467 5431.270045823552 5443.193549550176 5107.508392983953 5269.990661708103 5518.177433187305 1.0373767370833251 1.1085850718174937 0.9314659835218513 1.079175921185692 0.9325197720748098 0.8729639905409973 0.9842507080614922 0.986411476516474 0.9255788627358166 0.9550237783246037 1.0 12.429976130962535 -5.992656174957837 1.1437193893002198 0.9608584250575418 1.0735878834077377 0.31031571490397136 0.05580660919156411 0.6142105325125644 1.254393350208321 0.00837284599766797 0.06027805007493726 1.0170535617166407e-06 5.992656174957837 0.11272945835019588 SLS(ph)ESAATR ddPTM_A549_PD325901_60min_R1 1 SLSESAATR 9 0 O14924-5;O14924-4;O14924;E9PBG5 O14924-5 RGS12 Regulator of G-protein signaling 12 1 S(0.063)LS(0.905)ES(0.032)AATR 84.882 0.0011120999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SLS(ph)ESSVIMDR ddPTM_A549_MK2206_60min_R1 1 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 S(0.001)LS(0.989)ES(0.01)SVIMDR 146.5 6.7441e-12 17460000.0 1633.7 1798.3 1543.5 1548.0 2348.0 1579.6 1474.6 1393.9 2334.2 2326.1 2324.5 True False 1909.4286198698094 1889.8257888396683 1762.3915094355575 1927.2600694923603 2002.6123103767918 1746.7522235463807 1742.5157324684315 1591.4895936397177 1805.507426951455 1800.6323944533895 1747.2624970636807 1.0928115398107914 1.081592372076645 1.0086586946136036 1.1030169037171977 1.1461427883573492 0.9997079582958156 0.9972833134098475 0.9108474521225384 1.033334962540349 1.0305448651701723 1.0 10.77088065007971 -7.295524496832764 24.636279061837485 1.0048265818763966 1.0827741667676705 0.5190238804172354 0.04309949759163912 384.6483992847772 278018.1727678821 0.006671582964747181 0.01066552661563581 5.063787858952395e-08 7.295524496832764 0.07794758489127385 SLS(ph)ESYELSSDLQDK ddPTM_A549_PD325901_60min_R1 2 SLSESYELSSDLQDK 15 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A2R8Y695 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 S(0.009)LS(0.955)ES(0.036)YELSSDLQDK;SLS(0.974)ES(0.026)YELSSDLQDK 195.6 2.1902000000000001e-38 17630000.0 4551.6 5067.1 4976.9 4599.0 6017.1 4618.4 4484.5 5395.1 5031.3 5619.7 5760.1 True False 5013.675081289175 5494.122299988994 5314.662362530935 4883.0697849131775 5594.479653868101 4580.789281625639 4655.160101512562 5287.490498125928 4819.851957817055 5264.871182936001 5051.644216282339 0.9924838065850358 1.0875909040229854 1.0520658492537622 0.9666297894008814 1.107457179156859 0.9067917465091759 0.9215138482057309 1.0466870333194518 0.954115482298184 1.0422094188593873 1.0 12.302537319377436 -7.261257643605616 24.99999980393787 0.9743178643140804 1.0402760603576144 0.2440148711981449 0.0546569325488918 16.712715222592855 2298980.8780383305 0.007303849632298956 0.012145096970880615 5.479517980875558e-08 7.261257643605616 0.06595819604353403 SLS(ph)FEMQQDELIEKPMSPMQYAR ddPTM_A549_PD325901_60min_R1 1 SLSFEMQQDELIEKPMSPMQYAR 23 1 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 S(0.088)LS(0.91)FEMQQDELIEKPMS(0.001)PMQY(0.001)AR 41.93899999999999 0.015416999999999998 6386100.0 1271.3 1413.5 1327.4 1605.5 1996.3 1883.1 1419.0 1852.3 1500.7 1707.0 1929.4 True False 1400.361440118404 1532.6206056786814 1417.4853463046402 1704.6680886449471 1856.0867748611263 1867.7646579398158 1473.0008215065952 1815.3544233987611 1437.6307978248262 1599.2197286815572 1692.0960314743063 0.8275898140948201 0.9057527333973618 0.8377097516561157 1.0074298721448374 1.096915742568072 1.1038171730196964 0.8705184540993128 1.072843615038244 0.8496153711632034 0.9451116833411476 1.0 10.724595732670943 -6.254029832950068 24.73434052654831 0.9623526113372148 0.8618909602866867 0.2935593121845057 0.08469335717699684 692.5146167092067 2311725.4682946876 0.013578750061020954 0.03514621655295002 5.571474755381648e-07 6.254029832950068 -0.10046165105052818 SLS(ph)FSGPR ddPTM_A549_PD325901_60min_R1 2 SLSFSGPR 8 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(0.263)LS(0.736)FS(0.001)GPR;S(0.005)LS(0.995)FSGPR 100.02 0.0023951000000000003 4393000.0 2181.88 1931.4 2076.9 2323.9 2216.1000000000004 1822.23 2059.3 2335.8 2194.1 2448.5 2352.4 True False 2403.382851384839 2094.16585624889 2217.8509234142725 2467.4420250401677 2060.4487811299628 1807.3903630384311 2137.667788392198 2289.210636600348 2101.8896071882805 2293.901292136376 2063.069713092235 1.164954744928384 1.0150727544296343 1.0750247116419753 1.196005161329153 0.9987295960259415 0.8760684874431226 1.0361587758409538 1.1096138061031209 1.0188165692364608 1.1118874353005546 1.0 11.010576856750845 -6.809147564540003 24.99999626287675 1.0081201683197898 1.103091023316933 0.2435970870983818 0.0741963421975407 106.396142170917 55753.271676806224 0.009654371140873938 0.01824507777643641 1.5518596296411457e-07 6.809147564540003 0.0949708549971433 SLS(ph)GSPLK ddPTM_A549_PD325901_60min_R1 1 SLSGSPLK 8 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.006)LS(0.497)GS(0.497)PLK 142.36 0.0010117000000000001 409470000.0 11753.0 12536.0 12889.0 12068.0 13513.0 11668.0 11773.0 11865.0 12151.0 12662.0 12621.0 True False 12946.155907898688 13592.452715095824 13763.72504785332 12813.412951583443 12563.893497319244 11572.979676513067 12221.027957432792 11628.343267087572 11640.33572624074 11862.519159089561 11068.697011110818 1.1696187812263057 1.2280083826896377 1.2434819594426714 1.1576261360051023 1.1350833331789225 1.0455593521889746 1.1041071903192632 1.050561168619484 1.051644625790742 1.071717759297404 1.0 13.43419777996622 -7.114684989316073 0.5167950394312498 1.0175294814081937 1.239389657468549 0.7897009134095359 0.034617369494154185 0.29222753912823507 0.13677519944125263 0.00755057862205461 0.02840858291243451 7.679182884138043e-08 7.114684989316073 0.22186017606035535 SLS(ph)GSSPCPK ddPTM_A549_MK2206_60min_R1 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.01)LS(0.902)GS(0.086)S(0.002)PCPK 57.163999999999994 0.017134 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SLS(ph)GSSPCPK ddPTM_A549_PD325901_60min_R1 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.038)LS(0.907)GS(0.044)S(0.011)PCPK 45.433 0.046064 14114000.0 4033.6 3986.0 4243.8 3479.6 4811.5 3755.1 4223.0 4392.3 4767.2 3965.2 4424.8 True False 4443.088102620623 4321.914208868215 4531.809788042511 3694.5269892550327 4473.5568387738895 3724.5197105994384 4383.70857591427 4304.692130807311 4566.851162384566 3714.8365952947365 3880.577651118226 1.1449553396619456 1.1137296035353945 1.1678183496048908 0.9520559363605103 1.1528069377724708 0.9597848685043532 1.129653616041174 1.1092915843513327 1.1768482872823285 0.9572895917246419 1.0 11.922055708304837 -11.09569486882024 1.451533810011411 1.0004013191632226 1.107587058521287 0.2705587223379122 0.07433582114431203 0.49879589542686414 1.8896629734966974 0.05096595207259624 0.011318194559209056 8.022415126977108e-12 11.09569486882024 0.10718573935806441 SLS(ph)IEIGHEVK ddPTM_A549_MK2206_60min_R1 2 SLSIEIGHEVK 11 0 A0A3B3IU16;C9JTT8;Q68DU7;H7C1N3;O15155-2;O15155 A0A3B3IU16 BET1;DKFZp781C0425 BET1 homolog 1 S(0.492)LS(0.508)IEIGHEVK;S(0.019)LS(0.981)IEIGHEVK 121.56 3.0913999999999997e-06 23073000.0 2591.9 3010.8 2417.07 2054.91 2813.3 1726.94 1335.2600000000002 2079.63 3021.1000000000004 2621.37 2372.75 True False 3029.3493541290068 3164.036859833439 2759.8468712092017 2558.363042248416 2399.4672967559754 1909.683644550004 1577.859458114606 2374.423921099769 2336.8256737053557 2029.2006963794674 1783.5306904314252 1.6985126022116421 1.7740299490266005 1.547406437139364 1.4344373528159269 1.3453467942149955 1.0707321465200372 0.8846830988554121 1.3313053337621066 1.3102245373417667 1.1377436380915968 1.0 10.80052032611989 -6.494091203736239 1.2170857656057879 1.1405991658553325 1.7355915506400523 0.7714374840635427 0.12911630640879926 0.2094893445693343 0.5836250769433768 0.024101215391750454 0.08823876139568707 3.2055960646530284e-07 6.494091203736239 0.5949923847847198 SLS(ph)IEIGHEVK ddPTM_A549_PD325901_60min_R1 2 SLSIEIGHEVK 11 0 A0A3B3IU16;C9JTT8;Q68DU7;H7C1N3;O15155-2;O15155 A0A3B3IU16 BET1;DKFZp781C0425 BET1 homolog 1 S(0.21)LS(0.79)IEIGHEVK;S(0.023)LS(0.977)IEIGHEVK 116.98 5.606799999999999e-06 44574000.0 3255.6000000000004 3213.1000000000004 2760.0 3132.0 4732.299999999999 2718.9 3574.3 3749.0 3685.1000000000004 4177.200000000001 3210.1000000000004 True False 3586.1061153539526 3483.879213375432 2947.3101972282716 3325.456526711911 4399.919573548722 2696.758179848421 3710.321942432008 3674.223253966397 3530.2280622804506 3913.4508791145913 2815.2780505005026 1.2738017528025025 1.2374902765842488 1.0468984392871235 1.181217793432769 1.5628721194222719 0.9579011847050024 1.3179237986004202 1.305101374733906 1.2539536056315446 1.390076151951973 1.0 11.45906170155664 -10.641662017636772 0.8690439928369647 0.9968457672623035 1.2358382792606621 0.0 0.18597125252853575 0.65745386679152 0.8677560502404728 0.10079692730585268 0.025785153939475464 2.2821174005172203e-11 10.641662017636772 0.2389925119983587 SLS(ph)IGR ddPTM_A549_PD325901_60min_R1 2 SLSIGR 6 0 Q8TDN4;Q8TDN4-2;Q8TDN4-4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.001)LS(0.999)IGR;SLS(1)IGR 100.19 0.033404 24517000.0 5021.3 5542.0 5467.6 5176.8 5694.8 4599.6 5167.0 5477.6 5410.799999999999 5719.200000000001 5789.799999999999 True False 5531.058679514311 6009.043789650688 5838.664215349746 5496.559178634168 5294.816893993464 4562.14238259252 5363.633012490894 5368.3449709059305 5183.402892563851 5358.088735955222 5077.691304566154 1.0892861239005338 1.183420462021196 1.1498659262919904 1.0824917957677624 1.0427606911101621 0.8984678486638166 1.056313330364846 1.057241302967434 1.0208188291995293 1.0552214411177216 1.0 12.309956974466571 -6.6036717087618335 2.4433581619952545 1.010123165353781 1.1439589323173864 0.5660079860330683 0.047083332855032245 0.1366873614220787 1.6441430195656743 0.006368345895960995 0.015231121471851735 2.4907394028625896e-07 6.6036717087618335 0.13383576696360544 SLS(ph)KSDSDLLTCSPTEDATMGSR ddPTM_A549_PD325901_60min_R1 2 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.122)LS(0.488)KS(0.347)DS(0.043)DLLTCSPTEDATMGSR;S(0.046)LS(0.745)KS(0.202)DS(0.007)DLLTCSPTEDATMGSR 135.02 8.5039e-23 39962000.0 6192.0 6056.799999999999 6871.7 6333.7 6726.9 7174.700000000001 6720.9 7141.6 6149.4 6553.5 7329.9 True False 6820.607281690522 6567.22779234145 7338.054884888954 6724.918264123634 6254.425750545163 7116.271621964202 6976.667527317596 6999.155185523182 5890.962103114542 6139.710891572695 6428.368768064433 1.0610168034501528 1.021600973635311 1.1415111904195292 1.0461313758993467 0.9729413442515302 1.1070104841086916 1.0852936069842574 1.0887917974299117 0.916400772211501 0.9550962480675089 1.0 12.650236977302606 -8.754615638370147 24.99973230490597 0.960522585729492 1.0649127292382161 0.5281201782428825 0.04558942977925374 100.49930452385922 368193.3009446849 0.008535215071702183 0.009572808274047415 1.7594801096040765e-09 8.754615638370147 0.10439014350872411 SLS(ph)LGDK ddPTM_A549_MK2206_60min_R1 1 SLSLGDK 7 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.006)LS(0.994)LGDK 60.717 0.028574000000000002 6417100.0 2018.3 2038.7 1251.0 1613.1 2831.6 2667.5 2245.8 2620.7 3308.2 2583.3 2472.5 True False 2358.9396973025864 2142.461122008248 1428.4106111460208 2008.309572414811 2415.075390997838 2949.7730794568056 2653.8327898939388 2992.192250557146 2558.897982109844 1999.7307358202313 1858.510012471479 1.2692639165099935 1.152784277529485 0.7685783781420125 1.0806019655197476 1.2994685930081316 1.5871709378278493 1.4279356969214416 1.6099952276168137 1.376854558188243 1.075985990067901 1.0 10.859930745207219 -6.718469395605736 6.407857263576558 1.2727384850332863 1.050464904250224 0.2378293934125395 0.2131343081210168 0.3083360061930285 31.528266023750692 0.036720071988185894 0.07622937514179719 1.9121880702624177e-07 6.718469395605736 -0.22227358078306225 SLS(ph)LGDKEISR ddPTM_A549_MK2206_60min_R1 6 SLSLGDKEISR 11 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 SLS(1)LGDKEISR;S(0.011)LS(0.989)LGDKEISR;S(0.043)LS(0.957)LGDKEISR;S(0.005)LS(0.995)LGDKEISR;S(0.137)LS(0.863)LGDKEISR;S(0.001)LS(0.999)LGDKEISR 119.32 3.9221e-06 399813600.0 10460.06 12168.5 11955.52 10983.759999999998 15936.099999999999 13049.1 12868.150000000001 13068.7 19003.0 17992.5 19075.7 True False 12225.462404086069 12787.824674134186 13650.992509806923 13674.781693079725 13591.920800424023 14429.947100708458 15206.126286968441 14921.228246215209 14698.850841555342 13927.981753666043 14338.677227462957 0.8526213548255739 0.8918413094369394 0.9520398774066198 0.9536989693085728 0.9479201313208538 1.006365292404427 1.0604971466854736 1.0406279470212558 1.0251190265586385 0.9713575061854167 1.0 13.807624318135874 -5.85460503844738 0.660637742344292 1.0176000439081012 0.8169033764469338 0.7944352105637269 0.027103468715293757 0.5346333095284175 0.24585862548151732 0.004581613896459725 0.0690205752222694 1.3976388415624876e-06 5.85460503844738 -0.20069666746116743 SLS(ph)LGDKEISR ddPTM_A549_PD325901_60min_R1 5 SLSLGDKEISR 11 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.002)LS(0.998)LGDKEISR;SLS(1)LGDKEISR;S(0.002)LS(0.998)LGDKEISR;SLS(1)LGDKEISR;S(0.023)LS(0.977)LGDKEISR 140.62 2.7889e-11 773145300.0 21833.300000000003 22665.0 26073.500000000004 22780.1 27420.899999999998 25485.5 26701.8 28452.499999999996 24620.5 27440.9 27059.0 True False 24049.800543174053 24575.05909282442 27843.00450269251 24187.175039639194 25494.950580969522 25277.954537690588 27717.951610785596 27884.99256694553 23585.78600509507 25708.276890906724 23730.914541133625 1.0134375774472446 1.0355715136990447 1.1732798773697177 1.0192264186748774 1.0743349371040138 1.0651909134759818 1.1680102577901539 1.1750492177034095 0.9938844103211025 1.0833243213760544 1.0 14.534480079682417 -8.80859974745792 24.97854000716208 0.9971120033907109 1.0902639176921873 0.13639602878197865 0.06208372840892194 92.84081271135273 49172.8249447264 0.00982044029287695 0.010454667104183012 1.5538183734277176e-09 8.80859974745792 0.0931519143014764 SLS(ph)MDSQVPVYSPSIDLK ddPTM_A549_MK2206_60min_R1 2 SLSMDSQVPVYSPSIDLK 18 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.319)LS(0.681)MDSQVPVYSPSIDLK;S(0.121)LS(0.876)MDS(0.003)QVPVYSPSIDLK 104.44 5.8341e-09 2185200.0 1105.12 1032.4 990.9200000000001 885.51 1299.06 1280.67 962.54 1421.76 1723.74 1429.24 1231.88 True False 1291.6372384100655 1084.9447502630671 1131.4473563523693 1102.4599897520548 1107.969994854376 1416.1896493600555 1137.4210586804309 1623.2988339573901 1333.3156422471511 1106.3736913497107 925.9701978416032 1.3949015221232999 1.1716843077585293 1.2219047211127578 1.1905998619845883 1.1965503829788544 1.529411694524438 1.2283560111672174 1.7530789195389118 1.4399120461490582 1.1948264576210124 1.0 9.854821951167343 -10.808785793263961 1.139971186441283 1.0063290790560595 1.3477476377460957 0.20385858999925 0.17802293958937812 0.4308114968476401 1.0220976743608472 0.11116263268441606 0.029855019842277675 1.5531528814784623e-11 10.808785793263961 0.34141855869003623 SLS(ph)MDSQVPVYSPSIDLK ddPTM_A549_PD325901_60min_R1 2 SLSMDSQVPVYSPSIDLK 18 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.055)LS(0.943)MDS(0.002)QVPVYSPSIDLK;S(0.146)LS(0.845)MDS(0.009)QVPVYSPSIDLK 97.095 6.636399999999999e-07 8527500.0 3525.8 3289.4 4494.5 4276.9 4538.0 3298.5 4223.5 4649.5 3207.9 4165.2 4200.1 True False 3883.7366204432255 3566.6092821503044 4799.52379762408 4541.074399455356 4219.266535250108 3271.6381096141913 4384.227603687881 4556.762075037813 3073.083118772746 3902.2085611625207 3683.5143266275672 1.0543563228106054 0.9682626334226057 1.3029741089722522 1.2328102992917978 1.1454459413255622 0.8881838970908882 1.1902295511639425 1.2370691874598314 0.8342802134792563 1.0593710829231873 1.0 11.846867138502764 -8.765435131727008 24.998381443536484 0.9217434332592831 1.1261967426216253 0.2264749854314242 0.1275110781235892 84.4892568380442 528583.6894979366 0.022440641093408976 0.024318354741919367 1.7161880289196857e-09 8.765435131727008 0.20445330936234218 SLS(ph)MVDLQDAR ddPTM_A549_MK2206_60min_R1 3 SLSMVDLQDAR 11 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 S(0.031)LS(0.969)MVDLQDAR;SLS(1)MVDLQDAR;S(0.001)LS(0.999)MVDLQDAR 150.21 9.8024e-12 11795300.0 4225.4 4141.18 3793.17 3762.0699999999997 5430.4 5018.9 4701.35 4049.8900000000003 6602.200000000001 6069.9 6543.6 True False 4938.544218888345 4351.9483735900885 4331.098543469823 4683.777318885738 4631.595353607381 5549.996666723809 5555.5244397399 4623.974309767961 5106.812241546951 4698.705374271363 4918.643525827448 1.0040459718124317 0.8847862933628584 0.8805473543117187 0.9522498010460722 0.9416407855717136 1.1283591985434949 1.1294830394941686 0.9400913657368745 1.03825622140158 0.9552847954113355 1.0 12.264044785513812 -7.031969605393325 23.72637770647096 1.0284397559777054 0.9265069993223594 0.3747135949377254 0.06380638294229371 272.30870610830004 202094.81649816153 0.008944821556535075 0.015504871307015907 9.290314038528898e-08 7.031969605393325 -0.10193275665534607 SLS(ph)MVDLQDAR ddPTM_A549_PD325901_60min_R1 2 SLSMVDLQDAR 11 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 SLS(1)MVDLQDAR;SLS(1)MVDLQDAR 152.4 4.3886e-12 15060900.0 2589.1 2552.9 2557.3 2435.2 2874.8999999999996 2117.33 2607.8 2765.3 2620.2 2522.3999999999996 2786.3999999999996 True False 2851.943526005319 2768.041842403328 2730.8537562941497 2585.61677325953 2672.9769418665787 2100.087166478525 2707.041256042916 2710.1439221641162 2510.0821059909435 2363.1352335245224 2443.690464444908 1.1670641464213216 1.1327301402029646 1.1175121383118676 1.0580786768535602 1.0938279543820024 0.8593916443323221 1.1077676552860098 1.1090373194134202 1.027168597051066 0.9670354195457878 1.0 11.254845839175635 -6.292947015546678 1.2710992571285444 1.0200719071432156 1.1562940219523647 0.3772071492030682 0.06705673290083862 0.39071834821869494 1.138883624487603 0.009598768343474104 0.04176136590865189 5.093930138316371e-07 6.292947015546678 0.13622211480914914 SLS(ph)NSNPDISGTPTSPDDEVR ddPTM_A549_MK2206_60min_R1 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.003)LS(0.973)NS(0.024)NPDISGTPTSPDDEVR 190.83 7.7447e-45 4541200.0 719.27 792.38 583.71 523.47 696.3 731.34 853.9 802.91 1038.9 1177.1 1194.7 True False 840.6651915368543 832.7087574713764 666.4888551814892 651.7201734994613 593.8751923830325 808.7299133757978 1009.0425769393692 916.7249513087493 803.5908087823949 911.1922924685458 898.0230179574015 0.936128779247763 0.9272688347848971 0.7421734653277057 0.725727693463617 0.6613139980908636 0.9005670202254888 1.1236266295651165 1.0208256725912062 0.8948443332891428 1.0146647404886107 1.0 9.81060861410351 -7.515689937443722 24.9598095862286 0.9692516146084331 0.7967444582928305 0.515242140783681 0.0943220657287416 261.16435581137677 906773.0374712062 0.015615298924015104 0.023699547345351363 3.0500717972648716e-08 7.515689937443722 -0.17250715631560265 SLS(ph)PDEER ddPTM_A549_MK2206_60min_R1 2 SLSPDEER 8 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.223)LS(0.777)PDEER;SLS(1)PDEER 160.16 0.0002579 193242000.0 2408.7 2846.3 2513.5 2410.5 3797.1 3011.7 2638.6 2575.6 3662.2 3857.4 3706.8 True False 2815.229672938978 2991.164512469746 2869.9520952162434 3001.0726082114575 3238.5516199879553 3330.396094995337 3117.9994654083835 2940.6991874441896 2832.7175473316843 2986.010660919352 2786.2992575244793 1.0103830969829861 1.0735259338680232 1.0300229192775532 1.0770819394603708 1.1623129178397316 1.195275807507578 1.1190468708585908 1.0554139794936774 1.0166594775065352 1.071676221732302 1.0 11.444134501022177 -8.60261554046711 2.8535922755382788 1.007423462105367 1.0974534760753483 0.19995947756632482 0.053694895095768136 0.21743098198523536 3.5666357821453176 0.009601638072344928 0.010973188648960075 2.496804046650674e-09 8.60261554046711 0.09003001396998123 SLS(ph)PDEER ddPTM_A549_PD325901_60min_R1 2 SLSPDEER 8 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.001)LS(0.999)PDEER;S(0.081)LS(0.919)PDEER 106.2 0.0019247 248250000.0 3440.2 3443.4 2852.13 3067.3999999999996 4169.9 3280.8999999999996 3476.2000000000003 3052.92 3882.8 3494.1 3868.2999999999997 True False 3789.446571458615 3733.5874026133506 3045.6926930509676 3256.8663314291543 3877.02060937405 3254.181438178926 3608.4886932496283 2992.0271156305907 3719.619418800716 3273.481929693164 3392.523623174072 1.1169993174323658 1.1005339438492034 0.897766097263427 0.9600128674659028 1.1428131503316339 0.9592214527114443 1.0636591204849144 0.8819473194504175 1.0964166596784404 0.9649105778754957 1.0 11.728143146265664 SLS(ph)PFR ddPTM_A549_MK2206_60min_R1 1 SLSPFR 6 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.002)LS(0.998)PFR 89.12299999999999 0.038129 170190000.0 1155.1 1206.9 1148.8 1495.3 2223.1 1304.0 1205.3 1363.8 2076.0 2229.0 2026.5 True False 1350.0526405163835 1268.326054913305 1311.7171143761377 1861.6485671265689 1896.0849349227624 1441.9884144748546 1424.287408344094 1557.1228264623333 1605.789314690781 1725.4673518922684 1523.2641214452792 0.8862892662603042 0.8326369912198234 0.861122569559096 1.222144302434058 1.2447512602894824 0.9466437200048342 0.9350232755385351 1.0222277309235963 1.0541765489540984 1.1327433815319814 1.0 10.572950399607587 -6.063092248793273 24.89542704190905 1.039990788942137 0.85631710757807 0.45364026514641176 0.09863465835218868 147.62882442229454 58252.285848910906 0.013799236848466888 0.03650940665928746 8.647842098494041e-07 6.063092248793273 -0.18367368136406692 SLS(ph)PFR ddPTM_A549_PD325901_60min_R1 1 SLSPFR 6 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.001)LS(0.999)PFR 75.243 0.045908 288790000.0 1047.4 1037.4 799.41 965.47 1050.5 774.09 913.81 766.86 1004.4 906.25 1290.9 True False 1153.7312769448736 1124.825338755617 853.662769842845 1025.1048891585401 976.7165040282594 767.7860676887215 948.5855396060196 751.5643757099682 962.1885608950863 849.0292203384078 1132.1274836893242 1.0190824739853042 0.9935500683104067 0.7540341367395911 0.9054677180152682 0.8627266081778893 0.6781798682129826 0.8378787312139206 0.6638513652727565 0.8498941813156511 0.7499413560490829 1.0 10.14482070725838 -4.241693369250989 19.96964629900658 0.8843837745501473 0.8604111923936452 0.0 0.12573938922693959 0.0 0.0 0.017136362080411263 0.0 5.732005926405497e-05 4.241693369250989 -0.02397258215650211 SLS(ph)PFRR ddPTM_A549_MK2206_60min_R1 3 SLSPFRR 7 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.001)LS(0.999)PFRR;S(0.147)LS(0.853)PFRR;SLS(1)PFRR 79.71300000000001 0.0067743 293615000.0 7001.17 7590.53 7129.24 7132.33 10472.8 7661.67 7056.7 7996.75 11053.8 11527.8 11206.4 True False 8182.796333827458 7976.855555225022 8140.2734335784535 8879.751170182459 8932.264993234274 8472.422833995068 8338.811046595674 9130.313801519776 8550.131949291403 8923.661973595186 8423.54159909419 0.9714199470098634 0.9469717055926689 0.966371844647126 1.0541588791034553 1.0603930529879249 1.0058029315016543 0.9899412199130557 1.083904399843124 1.0150281622887487 1.059371746268194 1.0 13.040211213106941 -6.125285504360898 6.977803107333511 1.0176918108118456 0.9586668317172029 0.46275726734191447 0.031353422823135156 0.18216023060959494 9.541745922329547 0.0041989219181921104 0.011233328375610755 7.494013923212253e-07 6.125285504360898 -0.05902497909464266 SLS(ph)PFRR ddPTM_A549_PD325901_60min_R1 4 SLSPFRR 7 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 SLS(1)PFRR;SLS(1)PFRR;SLS(1)PFRR;SLS(1)PFRR 109.48 0.0036246000000000004 392012000.0 13118.4 12007.6 13215.400000000001 13244.4 14206.2 13470.5 13387.5 13832.3 14924.400000000001 13586.5 14880.199999999999 True False 14450.170310744332 13019.522592675869 14112.27651465598 14062.476507785184 13208.405520729422 13360.800714130033 13896.96863842109 13556.403925270564 14297.179368999032 12728.646071313407 13050.029733359575 1.1072902212479716 0.9976622933964877 1.0813980353302184 1.077581951544333 1.01213604800953 1.0238138140004416 1.064899385086955 1.0388025316614071 1.09556680414692 0.9753729555707739 1.0 13.671765473403731 -5.222095826729961 22.648866836283837 1.0454330712388553 1.107290796211543 0.18972466143346978 0.03825041614424407 9051.87145479674 5210525.835741488 0.005265668396824932 1.8084199823620495 5.996587474340761e-06 5.222095826729961 0.06185772497268771 SLS(ph)PGAASSSSGDGDGKEGLEEPK ddPTM_A549_MK2206_60min_R1 2 SLSPGAASSSSGDGDGKEGLEEPK 24 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.001)LS(0.999)PGAASSSSGDGDGKEGLEEPK;S(0.003)LS(0.997)PGAASSSSGDGDGKEGLEEPK 205.59 1.9453999999999998e-62 63490000.0 6586.0 7773.8 6498.4 6009.1 8416.7 7516.9 6955.0 7957.0 8759.400000000001 9905.900000000001 9367.7 True False 7697.555787759423 8169.453215415565 7419.970835708475 7481.329769758754 7178.614579535072 8312.333368685611 8218.633473021793 9084.92911729051 6775.409885887483 7668.150310053665 7041.441554632589 1.0931789645680114 1.1601961263231466 1.0537573560951947 1.062471329444858 1.019480815659435 1.1804874476614662 1.1671805281994743 1.2902086947400002 0.9622191469344679 1.0890029052373178 1.0 12.781655098584322 SLS(ph)PGAASSSSGDGDGKEGLEEPK ddPTM_A549_PD325901_60min_R1 2 SLSPGAASSSSGDGDGKEGLEEPK 24 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(0.012)LS(0.988)PGAASSSSGDGDGKEGLEEPK;S(0.001)LS(0.999)PGAASSSSGDGDGKEGLEEPK 214.62 1.1261999999999999e-74 106906000.0 11019.1 10986.9 11183.8 9754.8 12262.9 10710.9 11044.0 11583.4 11214.099999999999 11296.7 13073.2 True False 12137.750920167326 11912.804621528905 11942.799921652731 10357.331841241805 11401.59620870837 10623.67398158758 11464.285463508682 11352.359999998493 10742.81037508322 10583.42443409312 11465.279277842794 1.0586528793610912 1.0390330957354852 1.0416492814730445 0.9033649848597974 0.9944455719227446 0.9265953078106299 0.9999133196575479 0.9901511969217773 0.9369863668165693 0.9230847481008246 1.0 13.484983876888705 -6.124509145608253 9.421908891068657 0.9682338624862762 1.046701040651155 0.5638024542703077 0.03349374232775158 0.20102072063715057 14.425434376476844 0.004486250870437797 0.01190120393570764 7.507422444169657e-07 6.124509145608253 0.0784671781648788 SLS(ph)PGGAALGYR ddPTM_A549_MK2206_60min_R1 3 SLSPGGAALGYR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(0.031)LS(0.969)PGGAALGYR;SLS(1)PGGAALGYR;S(0.001)LS(0.999)PGGAALGYR 228.73 2.3552e-40 339457700.0 11149.4 13110.2 11073.4 10799.400000000001 15065.099999999999 11616.4 11424.4 11846.3 15914.1 15853.7 18704.5 True False 13031.146143341157 13777.453181808276 12643.774629467902 13445.253484803494 12849.043746617288 12845.639737657746 13500.065600171138 13525.549302772204 12309.581759595641 12272.338159127154 14059.656432061793 0.9268466983037217 0.9799281546019875 0.8992947082714554 0.9563002872632643 0.9138945754973208 0.9136524636807205 0.9601988260101038 0.9620113669298771 0.8755250755292098 0.8728761060719222 1.0 13.779273720061125 -11.116817351257641 1.4783657505039551 0.999859572835197 0.9259043881421439 0.0 0.04779985134856627 0.32768805986342997 1.2853656264508104 0.02354570969090008 0.005138481526176873 7.641570931784211e-12 11.116817351257641 -0.07395518469305307 SLS(ph)PGGAALGYR ddPTM_A549_PD325901_60min_R1 1 SLSPGGAALGYR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(0.037)LS(0.963)PGGAALGYR 77.597 0.0010588 3338900.0 3029.2 2591.3 3122.6 3536.6 3633.7 3988.8 3023.9 3411.1 4346.1 4033.1 4585.9 True False 3336.722154020823 2809.6779451681414 3334.5184137192023 3755.0477497986385 3378.481447584468 3956.3165352824276 3138.9761692415736 3343.062934543819 4163.448530969866 3778.4493777068456 4021.863372415267 0.8296458245962262 0.6986010426010154 0.8290978844755509 0.9336587054531401 0.840028895749279 0.9837023709998691 0.7804780716249221 0.8312224024000585 1.035203870804187 0.9394773088569036 1.0 11.973648357034598 -7.663132157982375 0.36967595504570283 1.0300458330001039 0.7629608936177121 0.3074710046533752 0.08227962619938149 0.8851827168534409 0.25589665891886454 0.036100840095099354 0.08729349008644913 2.1720401156187407e-08 7.663132157982375 -0.26708493938239175 SLS(ph)PGVSR ddPTM_A549_MK2206_60min_R1 2 SLSPGVSR 8 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.001)LS(0.999)PGVSR;S(0.069)LS(0.931)PGVSR 150.66 0.0006251000000000001 114074000.0 7308.3 6986.5 6845.1 6066.5 8964.5 7096.5 6866.5 7713.0 10075.4 9294.0 9344.4 True False 8541.762369219883 7342.083008245754 7815.838108997303 7552.792772335538 7645.833925201338 7847.446919724547 8114.054168584348 8806.341370071845 7793.337987107652 7194.478945036669 7023.927587679867 1.2160948789111 1.0452959425612443 1.1127446875600575 1.0752947945510305 1.088541108910677 1.1172448493758893 1.1552018535636086 1.253763120439677 1.1095413342212337 1.0242814800163875 1.0 12.778062256324416 -10.210517940514595 0.9798003023967756 1.009443580850455 1.1263181737797046 0.3749868061964169 0.05805306262517898 0.3845277453259055 0.7306270327053674 0.025137545178112106 0.011153259546796588 6.158600876797083e-11 10.210517940514595 0.11687459292924962 SLS(ph)PIIGK ddPTM_A549_MK2206_60min_R1 2 SLSPIIGK 8 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 S(0.006)LS(0.994)PIIGK;S(0.006)LS(0.994)PIIGK 123.86 0.0011299 371480000.0 18581.5 18717.8 18382.9 17165.4 25418.0 19756.1 21216.0 21169.3 26299.0 25940.0 24998.0 True False 21717.60292594165 19670.456069812128 20989.871641595662 21370.92377058409 21679.045871020986 21846.677388962165 25070.6725756478 24170.113103262265 20342.318490873226 20080.135983887572 18790.306690298083 1.1557875708944658 1.0468406074483334 1.1170584912503463 1.1373376774961552 1.1537356057213495 1.1626567755938846 1.3342343469355098 1.2863075362012006 1.0825964060169644 1.0686433337597125 1.0 14.197700993777415 -9.056323583246064 3.4501973057622535 1.0326655794564863 1.1715921674751084 0.3419821817184875 0.07628440983966978 0.1803766522419578 4.485214978512669 0.01588342198730029 0.015796944936801748 8.783678204585727e-10 9.056323583246064 0.13892658801862212 SLS(ph)PIIGK ddPTM_A549_PD325901_60min_R1 2 SLSPIIGK 8 0 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 S(0.448)LS(0.552)PIIGK;S(0.339)LS(0.661)PIIGK 118.21 0.0012478 304091000.0 14434.599999999999 15347.300000000001 14756.599999999999 14528.3 18125.4 14174.9 13732.900000000001 15257.699999999999 13494.9 13682.0 15996.2 True False 15899.989965809105 16640.670832354044 15758.071614644463 15425.680094836729 16852.334433235425 14059.46431407312 14255.513024431235 14953.373204065892 12927.756282778877 12818.116185015275 14028.768808266446 1.1333845601931969 1.1861818424542385 1.123268323116069 1.0995747599566366 1.2012696668937328 1.0021880398933216 1.0161628022575424 1.0659077363406704 0.9215175229889883 0.9137021473660757 1.0 13.776100780371198 -7.586263406592288 1.0687143884536072 0.9676062717901375 1.1510182328813894 0.705039510780152 0.05081887850167443 0.19425054935220581 0.445912904256575 0.008924665614972066 0.016466207481432266 2.5926064276413404e-08 7.586263406592288 0.1834119610912519 SLS(ph)PILPGR ddPTM_A549_MK2206_60min_R1 1 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.394)LS(0.606)PILPGR 109.83 0.00038675 34106000.0 1834.8 2230.7 2158.1 1619.5 2165.9 2164.1 1945.4 1804.3 3285.2 2926.2 3362.4 True False 2144.469383446856 2344.23310190994 2464.1510311064944 2016.2775727021167 1847.2989791503815 2393.1036255866816 2298.853998334523 2060.065050437005 2541.107445386392 2265.1693876658364 2527.4232824809296 0.8484805051498282 0.9275189946057752 0.9749657084299995 0.7977601483210719 0.7309020977827919 0.9468551002812639 0.909564303798752 0.8150850966344017 1.0054142742928402 0.8962366546858492 1.0 11.303451585825357 -8.77658822609225 24.78486663792771 1.002556761359869 0.8713654100602324 0.2203569750419736 0.07459078798215145 145.64720012021647 238290.9374017981 0.0119247838656577 0.012719102173262472 1.6726758009958506e-09 8.77658822609225 -0.13119135129963655 SLS(ph)PILPGR ddPTM_A549_PD325901_60min_R1 1 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.056)LS(0.944)PILPGR 178.94 3.3872e-08 54845000.0 3763.0 3607.8 3264.9 3585.2 3940.5 3732.9 3383.4 3830.8 3926.9 3477.6 4287.1 True False 4145.0169898258155 3911.8419675751998 3486.4757474386183 3806.649661420033 3663.7328739870127 3702.5005000390515 3512.157138467522 3754.391688795537 3761.8660491626006 3258.0237425090695 3759.813878166009 1.1024527075387316 1.0404350040548678 0.9273000899553246 1.0124569419582201 0.9744452764704769 0.9847563257160713 0.934130585256712 0.9985578569721337 1.0005458171768844 0.8665385702811155 1.0 11.876445530689207 -5.519767853968757 6.453022793970976 0.9898986712753841 1.0885931237036353 0.3863977587059463 0.0462399323653668 0.0630011931998576 12.542072391389773 0.0037065317153919513 0.017021254458179286 3.021566424807829e-06 5.519767853968757 0.09869445242825114 SLS(ph)PLGGRDDS(ph)PVSHR ddPTM_A549_MK2206_60min_R1 1 SLSPLGGRDDSPVSHR 16 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8YFE7 Q14004 CDK13 Cyclin-dependent kinase 13 2 S(0.519)LS(0.583)PLGGRDDS(0.76)PVS(0.137)HR 62.589 0.0010478 3871700.0 854.36 816.58 551.66 553.49 891.73 747.29 676.35 761.21 1065.7 1339.2 1073.7 True False 998.5550809034521 858.1404341048186 629.8936832492509 689.0950748471099 760.5576982675882 826.3677317890448 799.2340401837946 869.1138486078555 824.3206515732003 1036.6737898852061 807.0706573875132 1.2372585618906946 1.0632779500157004 0.7804690673406663 0.8538224857259833 0.9423681697579152 1.0239100185651604 0.9902900481736188 1.0768745470454546 1.0213735861015258 1.2844895058394492 1.0 9.656551173810923 -7.269804493937116 23.27912504274876 1.015106521587491 0.9627310122453557 0.027997924926441042 0.13761392528356256 692.5319452910596 1927236.1610828175 0.017000750426442376 0.02747970717150473 5.3727360604636726e-08 7.269804493937116 -0.05237550934213531 SLS(ph)PLIK ddPTM_A549_MK2206_60min_R1 1 SLSPLIK 7 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 S(0.004)LS(0.996)PLIK 68.22399999999999 0.022930000000000002 13161000.0 1188.4 1163.9 1054.1 1127.1 1592.4 1191.0 1264.5 1303.8 1775.6 1755.8 1563.7 True False 1388.9728664095494 1223.137538581155 1203.5872303829087 1403.239550597442 1358.1600694395245 1317.0308294781837 1494.2432820468819 1488.6176427200403 1373.429435050553 1359.16356054394 1175.3901340754912 1.181712204435043 1.0406226010593664 1.023989563541467 1.1938500332072013 1.1554972515638748 1.1205052614416409 1.2712743103141546 1.2664881213171997 1.1684881429865246 1.156351003076095 1.0 10.198923978538595 -10.592053133390749 1.0046218395536997 1.0048191232438988 1.1557756919463926 0.009064601083992097 0.08614048043467987 0.4627243193836534 0.870178954732155 0.04606001873579388 0.01436076313914043 2.5582728780290023e-11 10.592053133390749 0.15095656870249385 SLS(ph)PLIK ddPTM_A549_PD325901_60min_R1 4 SLSPLIK 7 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 S(0.02)LS(0.98)PLIK;S(0.005)LS(0.995)PLIK;S(0.001)LS(0.999)PLIK;S(0.008)LS(0.992)PLIK 120.87 0.0065764 53722000.0 6139.2 5875.800000000001 6532.3 6349.299999999999 6932.1 6239.2 6256.3 6614.200000000001 7164.9 6356.6 6407.799999999999 True False 6762.447064559832 6370.974287121897 6975.621159910955 6741.481840693461 6445.213210446736 6188.390023800167 6494.3869200787185 6482.274592260481 6863.784169610918 5955.243191175855 5619.681222390928 1.2033506522782278 1.1336896231297842 1.241284137633546 1.1996199737865658 1.146900145290551 1.101199477141744 1.155650412020282 1.153495071292061 1.2213831884739323 1.0597119223503144 1.0 12.456272580247179 -10.864852243722463 1.0048298558572493 0.9954410829760668 1.174145863062867 0.6216754180949745 0.04228456632051374 0.25068052995385914 0.4301353245686001 0.03321364307213178 0.007261808236285508 1.3650474759614883e-11 10.864852243722463 0.17870478008680013 SLS(ph)PQDR ddPTM_A549_MK2206_60min_R1 3 SLSPQDR 7 0 E9PKP7;P17480-2;P17480 E9PKP7 UBTF Nucleolar transcription factor 1 1 S(0.007)LS(0.993)PQDR;S(0.312)LS(0.688)PQDR;S(0.012)LS(0.988)PQDR 78.816 0.016603 40842000.0 4042.3999999999996 4743.200000000001 4598.8 3909.11 5214.5 4050.6 4092.7 4112.7 6384.0 5726.2 6486.0 True False 4724.658292808789 4984.608620154764 5250.978991637341 4866.842125486619 4447.453957606378 4479.231803429329 4836.290613233113 4695.687819615518 4938.034193153148 4432.647442981384 4875.347195506574 0.9690916571364047 1.0224110038253054 1.0770471888601028 0.9982554944952855 0.9122332788330296 0.9187513470953762 0.9919889639225165 0.9631494191723121 1.0128579555737796 0.9091962613589428 1.0 12.251289248016551 -6.505279640216523 24.91961718576062 0.9884109403101045 1.0252802714812386 0.10294657310926725 0.046863997397738416 1221.3433994199534 1729370.1505382238 0.006340781342240709 0.01443149960967057 3.1240671469174695e-07 6.505279640216523 0.03686933117113411 SLS(ph)PQDR ddPTM_A549_PD325901_60min_R1 2 SLSPQDR 7 0 E9PKP7;P17480-2;P17480 E9PKP7 UBTF Nucleolar transcription factor 1 1 S(0.004)LS(0.996)PQDR;S(0.22)LS(0.78)PQDR 72.325 0.019847 32754000.0 2696.1 2202.33 2397.29 2544.0 2891.2 2605.1 2598.6000000000004 2623.3 2523.1 2747.8 2366.6 True False 2969.8060872360807 2387.928078177808 2559.9845154758564 2701.1371021567998 2688.1320860985284 2583.884929318153 2697.4911450084824 2570.976223560962 2417.0628813166 2574.3034390575176 2075.5232031134497 1.4308710607432071 1.1505186136178704 1.2334164762097943 1.301424671188874 1.2951587734919643 1.2449318443860904 1.2996680263376634 1.2387123495918009 1.1645559431428247 1.2403154227309325 1.0 11.019259345165203 -9.600281147152556 0.5558056872406738 1.0032403780987444 1.280941018644868 0.17655107446505647 0.09399674988197401 0.2923956286350196 0.19793071117664596 0.03399356957371382 0.017011704699692702 2.5102608497702624e-10 9.600281147152556 0.27770064054612353 SLS(ph)PQEDALTGSR ddPTM_A549_PD325901_60min_R1 1 SLSPQEDALTGSR 13 0 Q96EN8 Q96EN8 MOCOS Molybdenum cofactor sulfurase 1 S(0.4)LS(0.6)PQEDALTGSR 140.77 2.8157e-12 15405000.0 7031.8 6959.4 5802.8 6087.9 6666.4 6615.5 5608.6 6622.1 7374.2 6472.4 8327.6 True False 7745.663159462441 7545.893062016426 6196.612903071087 6463.935756375941 6198.175061831496 6561.625561362038 5822.038342143681 6490.017020563051 7064.2880184712685 6063.731559413309 7303.35799300582 1.0605618904181064 1.0332087060832664 0.8484607914613216 0.885063523185668 0.8486746874201264 0.8984395352994999 0.7971728001994768 0.8886346563838609 0.9672657461453347 0.8302662371501356 1.0 12.834344234401588 -8.891219575729721 3.9756965164482 0.9861638035160706 0.9031823035396589 0.0 0.08740790013436806 0.2810792119976741 7.905301857921877 0.013982865470058817 0.014699330615455069 1.2846369937918568e-09 8.891219575729721 -0.08298149997641169 SLS(ph)PQLLQQMPSKPEGAAK ddPTM_A549_MK2206_60min_R1 2 SLSPQLLQQMPSKPEGAAK 19 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.171)LS(0.829)PQLLQQMPSKPEGAAK;S(0.023)LS(0.977)PQLLQQMPSKPEGAAK 184.3 5.733199999999999e-44 39001000.0 5972.1 7450.9 7468.7 6709.8 7897.400000000001 6693.7 6662.3 7213.799999999999 10023.8 10444.4 10063.6 True False 6980.044476173408 7830.118984632981 8527.873966000227 8353.70130121437 6735.702921622523 7402.022891081547 7872.753671791964 8236.378241335964 7753.425304719382 8085.002786049174 7564.530378769656 0.9227333524581188 1.035109728240198 1.1273500850673106 1.1043251706225643 0.8904323975651826 0.9785171742922473 1.040745859635564 1.0888155416034673 1.0249711372010446 1.0688043250827912 1.0 12.885034804480096 -10.364102401066823 1.154214251849947 1.0022554145419451 1.0259203095515668 0.0 0.0715820444057354 1.9758223584068355 5.190838367137018 0.028782256867676853 0.012556788758166784 4.324118618448002e-11 10.364102401066823 0.023664895009621656 SLS(ph)PQLLQQMPSKPEGAAK ddPTM_A549_PD325901_60min_R1 4 SLSPQLLQQMPSKPEGAAK 19 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.208)LS(0.792)PQLLQQMPSKPEGAAK;S(0.013)LS(0.987)PQLLQQMPSKPEGAAK;SLS(1)PQLLQQMPSKPEGAAK;S(0.117)LS(0.883)PQLLQQMPSKPEGAAK 243.35 7.017899999999997e-86 110003000.0 26567.199999999997 26815.199999999997 31062.8 28529.1 34372.5 30265.1 31848.5 32603.5 30683.300000000003 30028.1 34014.200000000004 True False 29264.28258626105 29075.01101195257 33170.908403790694 30291.277712712883 31958.29417868763 30018.631059961917 33060.5120956679 31953.197615549063 29393.787605049998 28132.120641372392 29830.66903377907 0.9810132837826512 0.9746684185671188 1.1119733307432451 1.015440776015189 1.0713234135814829 1.0063009658271493 1.1082725653330632 1.0711525638049393 0.985354621841221 0.9430603319528869 1.0 14.864508713940356 -8.775833904426696 24.993252376488456 0.9930841222756659 1.043613848218364 0.26825409448575255 0.04656198504194489 260.60072696251586 452480.3275618389 0.007495977296507734 0.007995013642229414 1.6755835790848906e-09 8.775833904426696 0.050529725942698 SLS(ph)PSHLTEDR ddPTM_A549_MK2206_60min_R1 2 SLSPSHLTEDR 11 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.066)LS(0.774)PS(0.112)HLT(0.047)EDR;S(0.047)LS(0.949)PS(0.003)HLTEDR 101.39 1.8169e-07 9424500.0 394.55 425.34 408.67 483.25 694.23 286.88 364.79 361.55 675.02 916.89 789.27 True False 461.1403941786336 446.9879892259714 466.62555112473535 601.6462716939167 592.10968664092 317.23745118446806 431.06762108175735 412.8008197004378 522.1290477854386 709.7639121922394 593.2724762561633 0.7772826359460545 0.7534278213051145 0.7865282307875947 1.0141145860846201 0.9980400411922343 0.5347247072481603 0.7265929877650871 0.6958030858020094 0.8800830456189808 1.1963540204514351 1.0 9.21255104304318 -9.410936263465878 1.3847373241913086 0.9685093246627456 0.7915039652165207 0.338170544737854 0.1449583805693114 0.3871885437682515 1.531177695448591 0.03210454162102257 0.02626471710375993 3.8820733465022245e-10 9.410936263465878 -0.17700535944622497 SLS(ph)PSHLTEDR ddPTM_A549_PD325901_60min_R1 3 SLSPSHLTEDR 11 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.028)LS(0.963)PS(0.008)HLTEDR;S(0.005)LS(0.602)PS(0.126)HLT(0.268)EDR;S(0.365)LS(0.628)PS(0.004)HLT(0.003)EDR 133.07 6.925399999999999e-08 11622000.0 5441.4 6243.5 5045.0 5658.2 6394.6 6556.8 5578.6 6139.5 6834.4 6355.8 8131.1 True False 5993.806922253041 6769.661656565155 5387.384038049502 6007.694163295448 5945.465356172401 6503.403594700111 5790.896675727055 6017.042856155426 6547.173935266208 5954.49370331239 7131.026247289685 0.8405251522571705 0.9493250230481377 0.7554850944626805 0.8424725915963097 0.833746104697359 0.9119870505555752 0.8120705877261386 0.8437835800201052 0.9181250647835739 0.8350121703135697 1.0 12.799893998825556 -9.418572872661072 0.7477964261750195 0.988925594192756 0.8467576716814329 0.0 0.06718679253714646 0.2874194242054541 0.3486967938373691 0.01649364913276067 0.011114178389187638 3.8144078486095503e-10 9.418572872661072 -0.14216792251132315 SLS(ph)PSSNSAFSR ddPTM_A549_MK2206_60min_R1 1 SLSPSSNSAFSR 12 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 S(0.002)LS(0.998)PSSNSAFSR 194.83 2.2008e-24 41696000.0 9676.1 10684.0 8938.8 8602.9 12467.0 8447.2 9486.4 9112.2 13869.0 14197.0 12626.0 True False 11309.189122067864 11227.76996494635 10206.456251728252 10710.610886198852 10633.12081493504 9341.077097202446 11209.956086049457 10403.882254942135 10727.693644242023 10989.88783975528 9490.615740127361 1.1916180605913034 1.183039148605934 1.0754261400105198 1.12854752309834 1.1203826080511343 0.9842435257079633 1.1811621493274178 1.0962283733555225 1.130347486189348 1.1579741652892797 1.0 13.212285975323734 -14.999999999972912 0.22695681724919625 0.33660680422889666 1.136357591439645 0.0 0.07286866948486317 33.339255626017966 0.41516753142012186 9.88712484904946 0.0345954994636115 1.0000000000623716e-15 14.999999999972912 0.7997507872107484 SLS(ph)PSSNSAFSR ddPTM_A549_PD325901_60min_R1 2 SLSPSSNSAFSR 12 0 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 S(0.028)LS(0.972)PSSNSAFSR;S(0.002)LS(0.998)PSSNSAFSR 281.01 2.1395999999999997e-92 163014000.0 18989.199999999997 21620.0 21492.0 20967.2 23417.0 20865.7 20683.2 22723.0 21135.0 23190.0 25108.0 True False 20916.96960488981 23441.99327539661 22950.57636189493 22262.296324033836 21772.2707042644 20695.776657200786 21470.31049428131 22269.771939151356 20246.76944894231 21725.779442369843 22019.875172725646 0.9499131780182878 1.0645833862143066 1.0422664153120211 1.0110091973458804 0.9887554099867044 0.9398680280819702 0.9750423345212674 1.0113486913284249 0.9194770310969088 0.9866440782225652 1.0 14.426518670059355 -6.851576058030019 2.8375634762667286 0.9648970955481633 1.0232879912577502 0.23483691195522693 0.03599070673985911 0.25269761416311154 4.119023163314997 0.005854966398687667 0.012080618522721525 1.4074207250650297e-07 6.851576058030019 0.05839089570958689 SLS(ph)PSVR ddPTM_A549_MK2206_60min_R1 2 SLSPSVR 7 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.001)LS(0.793)PS(0.205)VR;S(0.006)LS(0.993)PS(0.001)VR 99.305 0.011405 41788000.0 6020.200000000001 6962.8 5891.8 5104.4 8306.3 5929.4 5795.9 5685.0 8706.1 9386.599999999999 9115.3 True False 7036.262580241309 7317.176779476638 6727.345834332627 6354.978229145224 7084.454273289071 6556.845172382828 6848.940006655218 6490.86615958232 6734.182250784879 7266.160540723175 6851.719440518205 1.0269338435884856 1.067932924428562 0.9818478256056306 0.9275012329846051 1.033967361739094 0.9569634643252299 0.999594345056432 0.947333908799308 0.982845592153371 1.0604871673165919 1.0 12.742250362811976 -5.771379620467126 24.96717829616285 0.9849700860096937 1.0474333839233454 0.2780000602894189 0.03680609916011422 116.43888125646437 292465.7241832395 0.003708295547778747 0.011725322291140731 1.692857412599069e-06 5.771379620467126 0.06246329791365168 SLS(ph)PSVR ddPTM_A549_PD325901_60min_R1 2 SLSPSVR 7 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.012)LS(0.986)PS(0.002)VR;S(0.022)LS(0.932)PS(0.047)VR 98.93299999999999 0.0086623 29952000.0 5754.4 4248.4 4397.3 4181.3 5230.2 5492.1 4641.5 4795.3 4789.3 4946.5 4722.6 True False 6338.582451834619 4606.427577761099 4695.727221112999 4439.569404578709 4862.848795210474 5447.374158499954 4818.134822426258 4699.653979659922 4588.022376239381 4634.1771458250305 4141.750139027963 1.5304115987359477 1.1121934986744981 1.133754346227909 1.071906622938061 1.1741048184890621 1.3152348586094118 1.1633089058233332 1.134702437835348 1.107749676400362 1.1188934605583514 1.0 12.016024806820644 -2.0000000466979806 0.04392620849326277 0.5677399942746113 2.206093936871927 0.2582819367353032 0.11669490743348061 397.4422311984536 1.2888327376840758 12.257323356653686 46.037902933810564 0.009999998924739318 2.0000000466979806 1.6383539425973155 SLS(ph)PVAAPPLR ddPTM_A549_MK2206_60min_R1 1 SLSPVAAPPLR 11 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.01)LS(0.99)PVAAPPLR 101.93 0.00023987 3466500.0 1458.1 1667.1 1141.9 1108.8 1804.3 1383.3 1281.7 1482.1 1832.2 1801.7 1857.2 True False 1704.191632877621 1751.9482692401768 1303.8385906216142 1380.4560497759228 1538.8898601417566 1529.6798878397758 1514.5682994064755 1692.1922137408887 1417.2096254221808 1394.6947186650066 1396.0059838875752 1.2207624125878138 1.2549718908520573 0.9339777949881742 0.9888611264628328 1.1023519081603652 1.0957545350772406 1.084929661396386 1.2121668769846523 1.0151887898614576 0.9990607022908906 1.0 10.447089410240045 -5.746567618637625 24.98452140142995 1.033526467410222 1.2378672978382201 0.49468682627531513 0.07280250583591776 142.9015853379585 240070.1760736877 0.010606930701437938 0.04073915355721812 1.7923894597818078e-06 5.746567618637625 0.2043408304279981 SLS(ph)PVAAPPLR ddPTM_A549_PD325901_60min_R1 2 SLSPVAAPPLR 11 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.268)LS(0.732)PVAAPPLR;S(0.002)LS(0.998)PVAAPPLR 102.4 0.00023121 14648900.0 6097.1 6255.2 4702.0 5230.799999999999 5849.0 5310.3 4028.5 4749.8 6199.200000000001 6270.4 7055.9 True False 6716.073103552208 6782.347656626309 5021.105995422948 5553.894635991273 5438.186417954585 5267.054677424351 4181.806771979784 4655.061512853987 5938.669182298705 5874.485873886842 6188.069031035319 1.0853261445321254 1.096036198466836 0.8114172563751881 0.8975165933244376 0.8788179948672498 0.8511628831236755 0.6757854107649038 0.7522639921286 0.9596966602205329 0.94932455414189 1.0 12.595273575530618 -5.738998318231142 24.704464966045308 0.9155163211854548 1.090681423136624 0.35150241211816513 0.10048099556975011 231.79975525635666 255174.28203145135 0.01684158724884956 0.06512349814891817 1.8239027652160334e-06 5.738998318231142 0.1751651019511692 SLS(ph)PVAAPPLREPR ddPTM_A549_MK2206_60min_R1 2 SLSPVAAPPLREPR 14 1 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.048)LS(0.952)PVAAPPLREPR;S(0.011)LS(0.989)PVAAPPLREPR 112.82 1.7588999999999998e-06 164994000.0 1781.04 2211.75 2137.37 1937.66 2554.6000000000004 2108.69 1807.6200000000001 2241.85 2677.0 3003.3999999999996 2957.9 True False 2081.6360097526626 2324.318627851935 2440.48120539182 2412.386786984863 2178.8217240581566 2331.830176164864 2136.0411557877296 2559.6391028776816 2070.6637742905664 2324.9298540481104 2223.371796112997 0.9362518735696281 1.0454025871495798 1.0976487196870914 1.0850127680859816 0.9799628329671516 1.0487810361908338 0.9607215309297604 1.1512420492841382 0.9313169205036235 1.0456774967248672 1.0 11.118533503183553 SLS(ph)PVAAPPLREPR ddPTM_A549_PD325901_60min_R1 2 SLSPVAAPPLREPR 14 1 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.001)LS(0.999)PVAAPPLREPR;S(0.007)LS(0.993)PVAAPPLREPR 138.66 5.072799999999999e-10 298480000.0 6124.5 4898.200000000001 5550.8 5584.5 6579.9 6418.5 5998.4 6132.5 6203.8 5880.1 6228.1 True False 6746.254731381392 5310.9885042343985 5927.510667671989 5929.441881680288 6117.750523422694 6366.229864046892 6226.672394450425 6010.182476646819 5943.075860295636 5508.829482495855 5462.08318317877 1.2351065527814375 0.9723375360870211 1.0852106181624195 1.085564185463307 1.120039794022753 1.1655314740816407 1.139981246280963 1.1003462003574012 1.0880602987882257 1.0085583279765944 1.0 12.4152355700296 -10.142073172046159 0.7156700416692882 1.0023380570386988 1.108616668677784 0.31304606030833015 0.06063971731223153 0.6146686346150675 0.6099777885316136 0.03341610616182294 0.012267730867468567 7.209859937227893e-11 10.142073172046159 0.10627861163908525 SLS(ph)PVPR ddPTM_A549_MK2206_60min_R1 2 SLSPVPR 7 0 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 S(0.008)LS(0.992)PVPR;S(0.002)LS(0.998)PVPR 72.23 0.019918 10181700.0 2556.7 2325.7 1803.4499999999998 2276.8999999999996 3387.7 2373.8999999999996 2365.1000000000004 1989.56 3514.1 3323.6000000000004 3437.5 True False 2988.2084546863825 2444.068196132132 2059.206328274413 2834.740602213926 2889.373817659053 2625.1045223327133 2794.8080556497284 2271.586222771962 2718.1619608645815 2572.7964516595503 2583.8738798263735 1.1564838663438088 0.9458929923841191 0.7969453711931109 1.0970893836367934 1.118233300865756 1.0159569098276229 1.0816348574403054 0.8791397445933407 1.0519716082455355 0.99571286034767 1.0 11.335319937747492 SLS(ph)QGSTNSNMLDVQGGAHK ddPTM_A549_PD325901_60min_R1 1 SLSQGSTNSNMLDVQGGAHK 20 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.144)LS(0.741)QGS(0.04)T(0.056)NS(0.019)NMLDVQGGAHK 94.838 6.5818e-07 4519600.0 1744.0 1969.6 1809.5 2095.8 2492.0 2217.6 2333.8 2454.6 2353.4 2832.6 3482.5 True False 1921.0495961350575 2135.5851043117996 1932.3035514074488 2225.2528060928544 2316.9705169332915 2199.5406008429354 2422.614036104361 2405.6410774035503 2254.4947821689534 2653.7491525854607 3054.174577386373 0.6289914173075877 0.6992347851115107 0.6326761953015234 0.7285938474404848 0.7586241251854214 0.7201751390142225 0.7932140009421224 0.7876567028012496 0.7381682759268626 0.8688924242360833 1.0 11.57656681396489 -14.999999999999702 0.16063030375827958 2.0859316713755254 0.6394967075896929 0.7232591534727861 0.05294990357767245 12.554999423387807 0.1298942856211946 4.294296484778193 0.060775755904928674 1.0000000000006872e-15 14.999999999999702 -1.4464349637858325 SLS(ph)QIHEAAVR ddPTM_A549_MK2206_60min_R1 1 SLSQIHEAAVR 11 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;H0YD14 Q9NZM1-5 MYOF Myoferlin 1 S(0.128)LS(0.872)QIHEAAVR 92.06299999999999 9.05e-05 9328300.0 581.52 577.13 392.8 650.26 670.91 638.35 668.67 625.24 933.6 1237.2 859.56 True False 679.6663592010112 606.5034518784619 448.5049464893338 809.5737291912809 572.2200277491029 705.8997732975644 790.158683595325 713.8696847171944 722.1410906528478 957.7156607272825 646.107529350853 1.0519400073914553 0.9387035815660877 0.6941645563857592 1.25300153985926 0.8856420978780649 1.0925422491311698 1.2229522915314124 1.104877520053701 1.1176794230805296 1.4822852500875565 1.0 9.335630477219427 -6.266547845282494 24.993632984800414 1.073237333505497 0.8993128055924433 0.22235567685420599 0.17396108152001394 397.76009024351856 1946082.0620608823 0.01675871211220449 0.040083194811150184 5.413176088089945e-07 6.266547845282494 -0.17392452791305368 SLS(ph)RPSSLIEQEK ddPTM_A549_MK2206_60min_R1 1 SLSRPSSLIEQEK 13 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.126)LS(0.828)RPS(0.023)S(0.023)LIEQEK 101.15 4.0611e-05 6420600.0 1629.3 1655.5 1685.9 1691.1 2145.6 1958.3 1205.7 1753.4 2165.7 2637.2 2347.6 True False 1904.2860074394805 1739.7578787877837 1924.9859706883105 2105.419575916363 1829.9850822591322 2165.526006185666 1424.7600831664104 2001.9498195622937 1675.1724079122469 2041.454688385055 1764.6261295361135 1.0791441742620467 0.9859073543499738 1.0908746835763747 1.1931250142316763 1.0370384137631468 1.2271868640837487 0.8074005361923052 1.1344895023676025 0.9493072667764575 1.1568766064467801 1.0 10.785146837450696 -7.748868728703983 24.999998933850176 0.9783565870217087 1.097580643457387 0.12445839175218398 0.10839024801985474 217.570857000625 432695.0056289094 0.013283206959596122 0.019627077706895174 1.7829175966185413e-08 7.748868728703983 0.11922405643567824 SLS(ph)RPSSLIEQEK ddPTM_A549_PD325901_60min_R1 2 SLSRPSSLIEQEK 13 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 S(0.004)LS(0.978)RPS(0.009)S(0.009)LIEQEK;S(0.141)LS(0.857)RPS(0.002)S(0.001)LIEQEK 122.14 2.1972e-06 47425000.0 9645.2 10457.3 9651.599999999999 9844.5 12442.7 10813.9 10000.8 10442.8 10281.0 10638.8 10567.599999999999 True False 10624.37360357905 11338.573370897542 10306.615615785644 10452.572406518333 11568.767676984691 10725.83518373712 10381.385916647741 10234.510161781878 9848.925323140562 9967.064352371031 9267.852193535748 1.14636847693681 1.2234305353732449 1.1120824329691432 1.1278311509768055 1.2482684699108402 1.1573161677328327 1.1201501383339578 1.1043022642204379 1.0626977122067298 1.0754448975052686 1.0 13.178019320518535 -8.721143012829408 0.7081657424135104 1.0134010258357533 1.1730589733517487 0.592356948811755 0.04260119862904762 0.21873268812601723 0.23026549996609674 0.01053720430216607 0.010932389987930063 1.9004523594125e-09 8.721143012829408 0.15965794751599538 SLS(ph)RS(ph)PLPR ddPTM_A549_MK2206_60min_R1 1 SLSRSPLPR 9 1 J3QSD7;Q9NYV4-3 J3QSD7 CDK12 Cyclin-dependent kinase 12 2 S(0.429)LS(0.584)RS(0.987)PLPR 47.288000000000004 0.010107 2286600.0 332.93 370.77 291.96 290.8 505.1 378.29 318.17 280.54 438.11 483.99 449.59 True False 389.12044464299174 389.640609313287 333.3643181696178 362.0460130545082 430.8004591019241 418.32039671142104 375.9773705408119 320.30740411771734 338.8787845179083 374.6563228543465 337.94439494724037 1.1514333436532982 1.152972545599158 0.9864472473989763 1.071318295162228 1.27476728581097 1.2378379489818996 1.1125421109573639 0.9478109680372817 1.002764921048073 1.1086330427608884 1.0 8.400642076124617 -8.1337080466528 5.459685762500443 0.9975840179522953 1.1437645714571663 0.36041843705348764 0.08044477960963078 0.16342484397860454 6.65657752425889 0.012509930530534423 0.016237116977522042 7.350078092203963e-09 8.1337080466528 0.1461805535048709 SLS(ph)RS(ph)PLPR ddPTM_A549_PD325901_60min_R1 2 SLSRSPLPR 9 1 J3QSD7;Q9NYV4-3 J3QSD7 CDK12 Cyclin-dependent kinase 12 2 S(0.649)LS(0.696)RS(0.655)PLPR;S(0.511)LS(0.58)RS(0.909)PLPR 45.915 0.012247 10373500.0 1381.78 1314.01 1469.24 1469.41 1477.0500000000002 1372.4099999999999 1818.49 1469.79 1417.33 1331.03 1996.31 True False 1522.0572883873267 1424.7462342184967 1568.9514616578501 1560.1721184277603 1373.3071035458738 1361.2335479810856 1887.6936320659113 1440.4738854220507 1357.7645489978415 1246.9885386449994 1750.7765256517416 0.8693612611813651 0.8137796077018583 0.8961460464371913 0.8911315039747708 0.7843988558360687 0.7775027412332678 1.0782036453014476 0.8227628508360436 0.7755213353071444 0.7122488338029305 1.0 10.773779230278496 SLS(ph)RS(ph)PLPSR ddPTM_A549_PD325901_60min_R1 2 SLSRSPLPSR 10 1 Q9NYV4;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.152)LS(0.856)RS(0.981)PLPS(0.012)R;S(0.198)LS(0.84)RS(0.948)PLPS(0.014)R 51.93899999999999 0.0070354 34461000.0 2857.8 2704.7 2902.8999999999996 2683.2 2853.8999999999996 2319.3 2356.73 2672.8 2760.5 3488.8 3394.9 True False 3147.9217521988317 2932.634561145475 3099.908250555779 2848.9351700106617 2653.4519094205125 2300.4123897614636 2446.4166498021395 2619.488907228963 2644.485784897336 3268.5165725976685 2977.34882204422 1.0572902069423957 0.9849818534638327 1.041163946798619 0.9568697993722514 0.8912129777251552 0.7726378490586205 0.8216761945019437 0.8798058486914027 0.8882015319527312 1.0977943022321233 1.0 11.539812540283224 -6.457769915785283 3.8860472887392112 0.9146945051244714 1.0227611490469228 0.28568015754986886 0.082673663405887 0.24618411007737354 7.265762590078648 0.011382498391828502 0.0271544887012656 3.4852190902726397e-07 6.457769915785283 0.10806664392245147 SLS(ph)SPGGPSKPK ddPTM_A549_PD325901_60min_R1 3 SLSSPGGPSKPK 12 1 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3QL04;J3QR12;Q9BZE9-4 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 S(0.003)LS(0.66)S(0.337)PGGPSKPK;SLS(0.553)S(0.446)PGGPS(0.001)KPK;SLS(0.574)S(0.426)PGGPSKPK 112.15 1.5845e-05 57974100.0 7423.500000000001 6365.56 7029.96 7184.15 7916.010000000001 8593.59 7123.63 7852.7300000000005 7647.41 8388.300000000001 7682.2 True False 8177.128255108139 6902.008081134764 7507.05536018364 7627.898629111551 7360.016766351965 8523.606652235681 7394.7236378499065 7696.101139802493 7326.015952284638 7858.661306443764 6737.338101478135 1.2137031171575197 1.0244414006208924 1.114246494255147 1.132182846432782 1.092422059794983 1.2651297179765475 1.0975734817624105 1.1423059113085048 1.0873754355117415 1.1664341596155932 1.0 12.71796298492041 -9.723299803303284 0.7465217071343853 1.0088728672248688 1.1328013944849118 0.0 0.07645879267937662 0.4239884890496578 0.49963645846591886 0.02365712782005033 0.012786383255629532 1.891037741835948e-10 9.723299803303284 0.123928527260043 SLS(ph)SPTDNLELSLR ddPTM_A549_PD325901_60min_R1 2 SLSSPTDNLELSLR 14 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 S(0.021)LS(0.905)S(0.053)PT(0.02)DNLELSLR;S(0.001)LS(0.468)S(0.468)PT(0.063)DNLELSLR 123.72 1.1632e-06 8922100.0 2564.0 2290.9 2347.1 2816.5 3066.2 2634.5 2663.6 3183.3 2167.3599999999997 2759.3999999999996 2668.7 True False 2824.295392482963 2483.9621829142498 2506.3883202588668 2990.468808264398 2850.840689815753 2613.0455054656923 2764.964755577846 3119.8065842494602 2076.2733963974247 2585.1710130778506 2340.466818283134 1.2067231077237595 1.0613105742453455 1.0708924820807524 1.2777232238045901 1.2180649892345012 1.1164633845920149 1.1813731918686654 1.3329847532459427 0.8871193473789514 1.1045535843034173 1.0 11.192580596202998 -8.776828292586401 24.999510695713703 0.9466952330488578 1.177414510523097 0.4113310769526737 0.09373231670765911 115.88592523664823 188257.70908548293 0.015016192577958927 0.016014525472227235 1.6717514455906513e-09 8.776828292586401 0.23071927747423926 SLS(ph)SPTVTLSAPLEGAK ddPTM_A549_MK2206_60min_R1 1 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 SLS(0.5)S(0.5)PT(0.001)VTLSAPLEGAK 287.01 3.248899999999999e-116 134380000.0 3966.9 3742.9 3635.2 4136.7 5732.2 4415.1 4066.8 3899.3 5680.9 6293.8 5948.3 True False 4636.415738606565 3933.3976227815115 4150.726022092735 5150.191685703518 4889.000973399425 4882.302951493815 4805.684918488145 4452.037716105424 4394.185220533167 4872.02620876606 4471.172945271628 1.0369573701034502 0.8797238825085425 0.9283304566606456 1.1518659082847529 1.093449310335817 1.0919512645237681 1.074815261523326 0.9957203111128948 0.9827813136103631 1.089652820054376 1.0 12.126437635163573 -4.905591268311434 20.76310256432961 1.0089461634965884 3.593122041079766 0.0 0.0794560090072576 4332.715334814603 947400.9003259012 0.010663226948894957 3048.2202702939085 1.2428214256811263e-05 4.905591268311434 2.584175877583178 SLS(ph)SPTVTLSAPLEGAK ddPTM_A549_PD325901_60min_R1 2 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 SLS(0.525)S(0.473)PT(0.002)VTLSAPLEGAK;S(0.006)LS(0.855)S(0.138)PTVTLSAPLEGAK 278.39 2.2950999999999997e-115 394480000.0 13654.9 13892.5 14755.7 14593.0 17269.5 15464.2 16173.3 15584.8 16311.0 17763.1 18353.4 True False 15041.135395793906 15063.269730732995 15757.110535232308 15494.376466892363 16056.549896540717 15338.264682339166 16788.78378186934 15273.948937960913 15625.505393030418 16641.53483453039 16096.048151788389 0.9344613816977633 0.9358365226472906 0.9789428055035718 0.9626199127126011 0.9975460898926745 0.9529211479548769 1.0430376216291315 0.9489254004414658 0.9707665661583095 1.0338894788085853 1.0 13.974418905675458 -5.717414134866122 1.0915849711914534 0.9853715136926114 0.9214129229726133 0.3234344857281938 0.028982424506362237 0.7369988392074799 1.117073778300907 0.003570840711687265 0.044860226978191226 1.91684000711783e-06 5.717414134866122 -0.0639585907199981 SLS(ph)SPTVTLSAPLEGAKDS(ph)PVRR ddPTM_A549_PD325901_60min_R1 1 SLSSPTVTLSAPLEGAKDSPVRR 23 2 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 2 S(0.392)LS(0.473)S(0.132)PT(0.003)VTLSAPLEGAKDS(1)PVRR 115.06 1.2152999999999998e-15 4439900.0 922.55 1162.6 953.74 815.1 1399.5 1103.0 735.04 973.42 1285.8 1023.1 1489.9 True False 1016.206596854585 1260.5763821450553 1018.4665317045261 865.4468757735881 1301.203948012898 1094.0175336984844 763.0123494293216 954.0043744667822 1231.7622974899455 958.5012913966616 1306.6517452542587 0.7777180113564562 0.9647378398440529 0.7794475730840927 0.6623393562338851 0.9958307198064466 0.8372678777432021 0.5839446908486305 0.730113726118465 0.9426859926248056 0.7335552834777325 1.0 10.351658963405956 -8.88047471245691 5.364508109609309 0.975109869638249 0.7942597568754424 0.010675840071348364 0.1338380502856558 0.17683920491196617 7.560369335607566 0.02021742764502552 0.02139412323711421 1.3168165843996571e-09 8.88047471245691 -0.1808501127628066 SLS(ph)SS(ph)PVKK ddPTM_A549_MK2206_60min_R1 1 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(0.041)LS(0.958)S(0.263)S(0.738)PVKK 79.97399999999999 0.0028031999999999996 8128300.0 1842.7 1662.6 1715.0 1701.4 2606.5 2106.7 1578.4 1804.1 2358.9 2574.4 2655.4 True False 2153.7027103104 1747.2192384612308 1958.21278826173 2118.2430763787474 2223.087302809671 2329.6295956857175 1865.1748488594692 2059.836699824532 1824.6129163892492 1992.8412520015497 1995.9908946882772 1.0790142961282163 0.8753643331294364 0.981073006631903 1.0612488674251006 1.1137762745941087 1.1671544203359436 0.9344605999070762 1.0319870222385086 0.9141388977499355 0.9984220155036232 1.0 10.962889424065702 SLS(ph)SSGTK ddPTM_A549_MK2206_60min_R1 1 SLSSSGTK 8 0 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 S(0.043)LS(0.715)S(0.229)S(0.013)GTK 105.52 0.0019773 8470500.0 4664.0 4236.1 3497.1 2723.4 4069.3 3716.4 3060.7 3025.4 4198.1 4020.1 3961.9 True False 5451.169176147882 4451.699396153991 3993.0413654986005 3390.633122258074 3470.7113605691143 4109.666981253336 3616.789571657485 3454.2597148989166 3247.237052988133 3111.956617919295 2978.0508871226484 1.8304486332719205 1.4948365776432926 1.3408237524633508 1.1385410292750426 1.1654305087857204 1.3799854794368676 1.2144821256402294 1.1599062090696424 1.0903900490852823 1.0449642185013246 1.0 11.540152690688297 -2.0000000000000004 0.3255741743685422 1.045191233047102 8.396477955730061 0.832191065191249 0.09405489858550604 14.285029406994669 0.17798225209687413 0.029795039513372847 63.93423379479538 0.00999999999999999 2.0000000000000004 7.351286722682959 up SLS(ph)SSGTK ddPTM_A549_PD325901_60min_R1 2 SLSSSGTK 8 0 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 SLS(0.985)S(0.013)S(0.002)GTK;SLS(0.981)S(0.019)SGTK 90.15 0.0026425 9193700.0 5735.8 5823.799999999999 4253.1 5666.1 6080.6 5595.299999999999 4786.200000000001 5347.5 5510.0 6248.200000000001 8824.7 True False 6318.094193527209 6314.59206462788 4541.740941967957 6016.082128353243 5653.519632931205 5549.733731915801 4968.341460109137 5240.839917467404 5278.433861541143 5853.687585675517 7739.3178443823535 0.8163631886643923 0.8159106773488284 0.5868399558321044 0.7773401027482112 0.7304932742922372 0.7170830612602531 0.6419611598863908 0.6771707820827529 0.682028308912592 0.7563570463673958 1.0 12.917990695231081 -10.68721948591552 0.8831025851388308 1.0053088159604926 0.7134501222925204 0.15135704218645574 0.09681944460476194 0.2661437793328613 0.35880169731236955 0.05098332113485502 0.012503361919359354 2.0548518422284408e-11 10.68721948591552 -0.29185869366797224 SLS(ph)SSLDDTEVKK ddPTM_A549_MK2206_60min_R1 2 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 S(0.001)LS(0.975)S(0.024)S(0.001)LDDTEVKK;S(0.001)LS(0.971)S(0.024)S(0.005)LDDTEVKK 118.47 5.7077e-06 18459200.0 5562.6 5261.4 5473.6 4505.1 8064.700000000001 5259.6 5358.299999999999 5306.5 7956.299999999999 8229.3 8026.299999999999 True False 6501.43088748718 5529.182786743604 6249.8387859063605 5608.849702241626 6878.393313243494 5816.167380960081 6331.833751041367 6058.7126254746845 6154.210753600317 6370.295414502934 6033.148195389209 1.077618297600555 0.9164672584985137 1.0359166696224626 0.9296721248332919 1.1401001749799977 0.9640352254905732 1.0495074123789012 1.0042373283827195 1.0200662331324182 1.0558824693501458 1.0 12.558695305138098 SLS(ph)SSLDDTEVKK ddPTM_A549_PD325901_60min_R1 2 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 S(0.001)LS(0.829)S(0.164)S(0.005)LDDTEVKK;S(0.006)LS(0.908)S(0.042)S(0.042)LDDT(0.003)EVKK 111.22 1.9049e-05 32627000.0 12602.9 12059.6 12536.9 11612.599999999999 15387.5 13814.4 13184.7 12742.8 14572.4 15957.5 16543.7 True False 13882.33713023539 13075.90481516988 13387.729424504027 12329.883927871877 14306.735083993191 13701.90010654973 13686.450973444682 12488.634857466783 13959.972704886066 14949.940726676004 14508.929779154909 0.9568133102539548 0.9012315183960801 0.9227234281427346 0.8498134676746673 0.9860641206319565 0.9443770364258952 0.9433122347251354 0.8607550692959656 0.962164192492162 1.0303958289297601 1.0 13.824653485497903 -9.054392759961994 3.5721980972293403 0.984963374359026 0.9210172351096623 0.4074489226744331 0.04078802058032318 0.17123429302582582 4.57452552344528 0.007060576442883973 0.007030362052283488 8.822816364389862e-10 9.054392759961994 -0.06394613924936376 SLS(ph)TEVEPK ddPTM_A549_MK2206_60min_R1 2 SLSTEVEPK 9 0 Q8IWB9;A0A087WVA8;Q8IWB9-2 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 SLS(0.981)T(0.019)EVEPK;SLS(0.981)T(0.018)EVEPK 104.22 0.00061858 4141900.0 2609.3 2999.2 2305.1000000000004 2142.8 3229.2 2511.8 1693.3 2336.6 3343.0 3993.7000000000003 3460.6000000000004 True False 3049.6860487398526 3151.8464693810433 2631.99784152893 2667.786096193946 2754.1889576953736 2777.5970088021004 2000.950691569778 2667.820205537388 2585.8158376740253 3091.52039625489 2601.237512298807 1.1723981506189858 1.211671927103513 1.0118252674293242 1.025583432339605 1.058799492423665 1.067798305871515 0.7692302921625431 1.0255965450766316 0.9940714084923552 1.1884806295611208 1.0 11.344982418726367 -5.790289698384833 6.542312166377028 0.9949652131890756 1.1925668893882038 0.31855795458619496 0.09566942898833714 0.08875409143979551 12.264328623394844 0.00996426098607938 0.032877388141557704 1.6207286212708646e-06 5.790289698384833 0.19760167619912816 SLS(ph)TEVEPK ddPTM_A549_PD325901_60min_R1 1 SLSTEVEPK 9 0 Q8IWB9;A0A087WVA8;Q8IWB9-2 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 S(0.002)LS(0.61)T(0.388)EVEPK 129.89 4.9971000000000007e-05 10611000.0 3768.8 4567.5 3640.7 4618.4 5348.9 5207.4 4398.9 5308.1 4731.2 5407.4 5444.0 True False 4151.405801556079 4952.419254642642 3887.7797953075983 4903.668078852582 4973.211716703244 5164.992660907965 4566.30254667044 5202.225781376106 4532.3641171911895 5065.975841167344 4774.422512359342 0.8695095146710441 1.0372813134620003 0.8142932020036915 1.027070408234434 1.0416362824675245 1.0818046889519246 0.9564093950315141 1.089603144235628 0.9493010108465376 1.0610656740272295 1.0 12.221110527980269 SLS(ph)TKR ddPTM_A549_PD325901_60min_R1 1 SLSTKR 6 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SLS(0.921)T(0.079)KR 100.19 0.013972 26483000.0 5721.0 6117.0 4869.9 4862.3 5581.2 4557.2 3231.6 3718.0 4503.2 6652.8 7824.1 True False 6301.7917084224 6632.5010576133645 5200.400699087661 5162.63322791549 5189.195766094735 4520.087674134847 3354.5803063993717 3643.841573285425 4313.946164299836 6232.741072626053 6861.78530105635 0.9183895199187097 0.9665853369956521 0.757878667274401 0.7523746374169882 0.7562457200891836 0.6587334747181602 0.4888786458945232 0.5310340404740538 0.6286915103035529 0.90832644846328 1.0 12.744368270664467 -5.766535376697637 24.163153765988753 0.7556524725770289 0.9424874544788995 0.2311322704988681 0.14501618406506728 116.73077973303235 553511.8088664254 0.02611270378256741 0.08505951824314965 1.7118457277394875e-06 5.766535376697637 0.18683498190187053 SLS(ph)VEHLETK ddPTM_A549_MK2206_60min_R1 1 SLSVEHLETK 10 0 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 S(0.208)LS(0.791)VEHLETK 61.11 0.002361 10490000.0 2294.7 2588.6 2763.4 2464.3 4561.9 3477.4 2978.5 3301.7 4825.2 4280.5 4859.6 True False 2681.989259971385 2720.348683195443 3155.29167293438 3068.0536106266313 3890.8505531123897 3845.376159888696 3519.65489567152 3769.7260860321817 3732.2999042610577 3313.532077063639 3652.8272018630514 0.7342228667711108 0.7447241637403443 0.8637943977544535 0.8399120574501394 1.0651614046040665 1.0527123095030169 0.9635426756229779 1.032002303341781 1.021756491070115 0.907114378521283 1.0 11.834797792834603 -6.349974401162442 1.4618198933604305 1.014688897505245 0.7453893413666457 0.7764991179576053 0.05406313891846182 0.10451323392484477 0.41888524426812385 0.006082049798949566 0.02229779038114714 4.4670992202204217e-07 6.349974401162442 -0.26929955613859935 SLS(ph)VEHLETK ddPTM_A549_PD325901_60min_R1 1 SLSVEHLETK 10 0 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 S(0.206)LS(0.794)VEHLETK 75.5 0.00047331 35577000.0 2400.5 2297.5 2927.9 2950.6 3206.3 3538.8 2833.7 3138.4 2478.9 2122.3 2341.8 True False 2644.1969928453004 2491.1183880769513 3126.604900892989 3132.851860701201 2981.100549134516 3509.9811860854015 2941.538004160139 3075.802149972828 2374.7204536069594 1988.2976158060162 2053.773445893299 1.2874823160911955 1.2129470234694884 1.5223708862070016 1.5254125848036522 1.451523562686765 1.7090401052287039 1.4322602184004292 1.4976345887240705 1.1562718655046504 0.9681192537481641 1.0 11.004061329749021 -8.903179900848468 2.605066113535214 1.0612477907960585 1.4604216149485998 0.672550813710099 0.12866590218215915 0.12386887420866922 1.6326312642284595 0.025292373887275385 0.0262481827602997 1.2497412339055465e-09 8.903179900848468 0.3991738241525413 SLS(ph)VLSPR ddPTM_A549_MK2206_60min_R1 1 SLSVLSPR 8 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 S(0.069)LS(0.929)VLS(0.001)PR 63.216 0.009996099999999999 1448400.0 570.18 688.6 600.93 492.31 896.19 503.19 507.84 415.36 853.65 1044.7 814.88 True False 666.4124444373922 723.646798751596 686.1509101166887 612.9259721006357 764.3616381757147 556.437231809511 600.1079544125648 474.2385519866512 660.2996379989324 808.7015444243393 612.5228064561205 1.0879798064876336 1.1814201710111116 1.1202046730089268 1.0006582051154107 1.247890903194429 0.9084351242836093 0.9797316085006134 0.774238194868952 1.0780000859384073 1.3202798914594742 1.0 9.258619751683554 -7.270386502731437 24.896057159422938 1.0030247134122043 1.1231524645932245 0.15488355827355205 0.13595447216078732 669.4216300784248 1862715.8337516733 0.015140469609173061 0.02441176240655906 5.3655407461523206e-08 7.270386502731437 0.12012775118102015 SLS(ph)VPDSGR ddPTM_A549_MK2206_60min_R1 2 SLSVPDSGR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.036)LS(0.963)VPDSGR;S(0.003)LS(0.996)VPDSGR 146.48 3.0010999999999998e-05 45093000.0 6603.7 6945.5 7148.1 5652.6 8439.9 7173.7 5856.200000000001 6407.700000000001 8968.5 9754.599999999999 8568.900000000001 True False 7718.243115035965 7298.996283370915 8161.808065174155 7037.4872537548545 7198.401890267925 7932.816172483331 6920.195736119372 7316.011097758247 6937.149069751567 7551.029085136073 6441.005640391043 1.1982978351447895 1.1332075596393643 1.2671636264362345 1.09260690747161 1.117589751067335 1.2316114307892017 1.0743967825029317 1.1358491990567612 1.077028876709756 1.172336977596194 1.0 12.653070239949068 -9.023641069194033 0.3192096466307359 0.9820507988679972 1.1940941850909228 0.024370942126107686 0.07267139835946886 0.6358145512727066 0.1895840679474 0.04880376161475134 0.03527957860439459 9.470195200373787e-10 9.023641069194033 0.21204338622292562 SLS(ph)VPDSGR ddPTM_A549_PD325901_60min_R1 2 SLSVPDSGR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.067)LS(0.929)VPDS(0.004)GR;S(0.004)LS(0.995)VPDSGR 112.89 0.00026011 59789000.0 9003.4 10110.8 9584.6 9813.3 11538.9 10632.9 8737.8 9575.7 8679.8 10329.0 9692.5 True False 9917.418540047232 10962.87259985569 10235.068592881911 10419.445253378666 10728.447471043957 10546.309187726763 9070.321760507624 9384.705151508675 8315.018190817576 9676.825177241837 8500.383945819793 1.1667024222975588 1.2896914621423503 1.204071328791587 1.225761720857633 1.262113280932428 1.2406862154636074 1.067048479024069 1.1040330897198782 0.9781932491304263 1.1383985992774572 1.0 13.053312291114818 -8.094079780518351 1.3327784702394834 0.9906376779705999 1.2362986950845918 0.6182720985020613 0.061876979247812366 0.09348555670369348 0.32829357676650917 0.007151525734866726 0.009976809853228016 8.052305056143072e-09 8.094079780518351 0.2456610171139919 SLS(ph)VPVDLSR ddPTM_A549_MK2206_60min_R1 2 SLSVPVDLSR 10 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.033)LS(0.967)VPVDLSR;S(0.067)LS(0.933)VPVDLSR 217.74 9.7545e-27 57220000.0 7377.299999999999 8466.3 8196.1 7497.5 10669.5 8379.7 7389.5 7226.9 11899.099999999999 10964.5 12575.8 True False 8622.407882331856 8897.198507508916 9358.430223832049 9334.38783657556 9100.030683801187 9266.434292005322 8732.076498762703 8251.335206453028 9203.972848958116 8487.611834824029 9452.881785576874 0.9121459548439347 0.9412154631071538 0.9900081727575459 0.9874647804035686 0.9626726420810569 0.9802761213140281 0.9237475615199198 0.8728909758548811 0.9736684598131184 0.8978861713656839 1.0 13.206538498013487 -8.985904687030065 16.736071595868328 0.9883856570432207 0.9482256726247981 0.0 0.04314022185303928 2.7083471473557093 3216.4395115936204 0.0064154032931403576 0.006502794739355438 1.0329880868806615e-09 8.985904687030065 -0.04015998441842261 SLS(ph)VPVDLSR ddPTM_A549_PD325901_60min_R1 1 SLSVPVDLSR 10 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.014)LS(0.986)VPVDLSR 143.24 4.6265e-08 44847000.0 745.26 664.27 1031.9 1155.2 1116.4 835.52 1126.6 985.47 960.54 1171.8 1077.5 True False 820.9182465685847 720.2503641557679 1101.9309393187868 1226.5540803504466 1037.9879153709176 828.7158021357732 1169.4733794991753 965.8140277637405 920.1718441678277 1097.8123480193606 944.9743308352672 0.8687201543802477 0.7621904010018296 1.16609616088173 1.2979760828701978 1.098429747243436 0.8769717600723265 1.2375715840508306 1.022053188376083 0.9737532694189518 1.1617377448221256 1.0 9.884131330452735 -8.526810625770036 23.44018801964752 0.9881476658224502 1.0494698577791326 0.0 0.16196887915873917 179.70788823113952 1071327.162458999 0.02675069328439669 0.030415006384649824 2.9729621100971285e-09 8.526810625770036 0.061322191956682426 SLS(ph)YEEPR ddPTM_A549_MK2206_60min_R1 2 SLSYEEPR 8 0 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 S(0.002)LS(0.998)YEEPR;S(0.017)LS(0.983)YEEPR 124.81 0.0011102 118603000.0 9010.6 9691.3 8656.8 7552.099999999999 11904.3 8539.8 7867.9 7824.400000000001 12033.2 11619.0 12220.900000000001 True False 10531.368991980731 10184.545775110862 9884.464411326036 9402.364839026646 10153.193239530847 9443.475967739547 9297.395586252793 8933.53266122004 9307.699413071816 8994.25983025404 9186.113250318578 1.1464444977984023 1.1086893332996584 1.0760224854601308 1.0235411411567965 1.1052762972608388 1.0280164973376573 1.0121141915957061 0.9725040850013712 1.013235865859701 0.9791148427156735 1.0 13.165238854489814 -4.124408180393811 0.3345451426351747 1.0000349624299978 1.4261211297376084 0.7744012289021004 0.02614183528530262 4.4145819351328175 0.19070754791490063 0.0074173153347047065 0.8934487476512316 7.509167980123636e-05 4.124408180393811 0.4260861673076106 SLS(ph)YEEPR ddPTM_A549_PD325901_60min_R1 2 SLSYEEPR 8 0 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 S(0.013)LS(0.987)YEEPR;S(0.125)LS(0.875)YEEPR 137.05 0.0010804999999999999 167757000.0 13987.3 14505.9 15576.3 16415.9 18467.8 16337.900000000001 15879.1 15302.0 15367.5 15792.4 15550.5 True False 15407.280399093976 15728.363101460474 16633.40138590099 17429.87285978609 17170.685438451288 16204.849559213482 16483.387839876923 14996.78960581323 14721.657416920792 14795.265168852162 13637.887082741372 1.1297410152773413 1.1532844498591415 1.219646510121822 1.2780478936391433 1.2590429392967069 1.1882228867931146 1.208646745633824 1.0996417197786845 1.0794676130990204 1.084864911924329 1.0 13.735332524543884 -8.686927602975112 0.9556445468785322 1.0240418662721178 1.2119735857885752 0.6677422733797301 0.04678952221339266 0.18085392130746605 0.32899832150425495 0.010839826009675048 0.011749655048500448 2.0562333421515535e-09 8.686927602975112 0.18793171951645737 SLS(ph)YEEPRR ddPTM_A549_PD325901_60min_R1 1 SLSYEEPRR 9 1 F5GZK9;Q8IZD4-2;Q8IZD4 F5GZK9 DCP1B mRNA-decapping enzyme 1B 1 S(0.018)LS(0.979)Y(0.002)EEPRR 55.718 0.0071456 3904200.0 1406.9 1433.8 1495.8 984.72 1743.4 1529.5 1492.6 1401.3 1408.4 1602.8 1605.8 True False 1549.7274522949606 1554.6313579215373 1597.313982976105 1045.543917938618 1620.9495984034916 1517.0442591041092 1549.40170978206 1373.3499722014155 1349.2098458429305 1501.5989344644402 1408.296780004892 1.100426752583768 1.1039089061299543 1.1342168821621224 0.7424173177013059 1.1510000032790395 1.0772191491475536 1.1001954501214422 0.9751850545285241 0.958043691499631 1.0662517700702432 1.0 10.45973567966234 -8.284112613061037 22.99953581777567 0.9792585304924962 1.0552659850491644 0.05141814125506827 0.10814277636757096 498.527472372082 505700.3590512096 0.016745969344469813 0.020255143009897142 5.198611784506947e-09 8.284112613061037 0.07600745455666813 SLS(ph)YS(ph)PVER ddPTM_A549_MK2206_60min_R1 1 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.196)LS(0.782)Y(0.032)S(0.991)PVER 66.056 0.006382100000000001 16288000.0 969.42 1250.9 709.32 862.92 1247.2 1283.6 1009.9 1117.0 2144.0 1467.9 1509.3 True False 1133.034395956535 1314.5654669741095 809.9122419649036 1074.3354387379513 1063.7385321558493 1419.4297000152787 1193.3857576426612 1275.3381706690325 1658.3874232644662 1136.3003704991738 1134.4991554391117 0.9987088932807449 1.1587187708970152 0.7138940898121906 0.9469689189165823 0.9376283155928182 1.2511509534494838 1.0519053733281603 1.1241420185768305 1.4617793369996663 1.001587674218554 1.0 10.147839819680042 -7.256322485558811 24.163507218028947 1.203534803690545 0.949296579791671 0.23735895306861166 0.16020340386313567 275.6510061396462 1301702.7622269022 0.028600956693996128 0.048569666392399596 5.542140282577275e-08 7.256322485558811 -0.25423822389887407 SLS(ph)YSEILR ddPTM_A549_MK2206_60min_R1 1 SLSYSEILR 9 0 Q5JW01;H0YCM7;Q5JVZ5;Q96JJ3-3;Q96JJ3 Q5JW01 ELMO2 Engulfment and cell motility protein 2 1 S(0.027)LS(0.971)YS(0.002)EILR 70.1 0.0037093000000000004 928710.0 372.54 376.57 274.23 241.01 736.81 355.06 453.2 385.28 804.67 521.57 704.3 True False 435.41564427146915 395.7358045394839 313.1199375656061 300.05746081935 628.4262250463049 392.63221353024716 535.5405736841809 439.894619870515 622.413529793945 403.74697475390326 529.402872308862 0.8224655872615682 0.7475135199277978 0.5914587055412253 0.5667847239111535 1.187047252512206 0.741651082884906 1.011593630666473 0.8309260166119263 1.1756897484885935 0.7626459845090354 1.0 9.04822221206272 -7.3936535103615775 0.7368529390252744 1.0727551917019114 0.6965345311951924 0.12717453734455864 0.18804332666084542 0.4587861789210494 0.49093036253107925 0.031932796984405105 0.07791496655535528 4.0396755859068795e-08 7.3936535103615775 -0.376220660506719 SLS(ph)YSEILR ddPTM_A549_PD325901_60min_R1 2 SLSYSEILR 9 0 Q5JW01;H0YCM7;Q5JVZ5;Q96JJ3-3;Q96JJ3 Q5JW01 ELMO2 Engulfment and cell motility protein 2 1 S(0.003)LS(0.996)YS(0.002)EILR;S(0.015)LS(0.982)YS(0.003)EILR 117.7 0.00017532 3182000.0 1846.01 1422.08 1715.22 1546.6 1869.1 1420.03 1468.52 1597.24 2064.5 2296.36 2378.3999999999996 True False 2033.415576239263 1541.9236723901934 1831.6251436557525 1642.1299694165527 1737.8208640449486 1408.4657464894456 1524.4053322049785 1565.3817951894605 1977.7362444921398 2151.3674377007496 2085.871877919814 0.9748516185314008 0.7392226189500738 0.8781100905787104 0.7872631041242123 0.8331388339048094 0.6752407764824329 0.7308240493300234 0.7504688143888182 0.9481580654246535 1.0313996082282162 1.0 11.026434829496557 -8.850544310238648 5.040058539277418 0.9774029147767185 0.7918758616411455 0.5527059140124442 0.07876289357970578 0.11273304199938633 4.7881646142758205 0.013294268684273107 0.014105456010475895 1.4107682911137879e-09 8.850544310238648 -0.18552705313557294 SLS(ph)YSPVER ddPTM_A549_PD325901_60min_R1 1 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.003)LS(0.972)YS(0.024)PVER 123.79 9.5688e-05 61983000.0 7487.9 7279.8 7142.7 5828.0 5872.4 4157.2 5365.2 6092.7 5847.6 7008.0 10194.0 True False 8248.066095699365 7893.294294460319 7627.446574544335 6187.982323651664 5459.942882680202 4123.345141515265 5569.375621950092 5971.176318869311 5601.8457075767665 6565.513684007239 8940.202625090216 0.9225815612446628 0.8828988139830519 0.8531626065317917 0.6921523575187671 0.610718024148262 0.4612138353490233 0.622958545292914 0.6679016762004379 0.6265904636048714 0.7343808590625748 1.0 13.12609181438165 -6.074672238073444 4.338022889081332 0.7466984040725323 0.8968417029942384 0.22115987199451548 0.1362751768377866 0.4155597913855853 14.62428541417035 0.026962551103854707 0.07743588924964712 8.420303820058809e-07 6.074672238073444 0.15014329892170608 SLSAS(ph)PALGSTK ddPTM_A549_PD325901_60min_R1 1 SLSASPALGSTK 12 0 O95544;O95544-2 O95544 NADK NAD kinase 1 SLS(0.278)AS(0.722)PALGSTK 166.62 7.967699999999999e-15 9555000.0 3894.3 4740.1 4694.5 4549.0 4825.2 4427.3 4827.3 5413.9 5024.4 4931.2 4785.5 True False 4289.646469167863 5139.564862382396 5013.097000321781 4829.981398471419 4486.294598036324 4391.245536666635 5011.005543099918 5305.915517377611 4813.241940821655 4619.843190436141 4196.913837783916 1.0220954336848889 1.2246057605738756 1.1944722227056326 1.150841209792808 1.0689508461305959 1.0463034759334806 1.1939738905256783 1.264242184247289 1.146852693874501 1.100771511877295 1.0 12.035113129806843 -10.476155829110485 0.9202814390963991 1.004360169819631 1.147790083984445 0.14492627133615799 0.07688372796061478 0.47343912885133527 0.7508889434464756 0.04165626697449393 0.013640129158776429 3.340751490853411e-11 10.476155829110485 0.1434299141648141 SLSDNGQPGT(ph)PDPADSGGTSAK ddPTM_A549_MK2206_60min_R1 1 SLSDNGQPGTPDPADSGGTSAK 22 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 SLSDNGQPGT(1)PDPADSGGTSAK 130.78 8.4407e-22 16139000.0 2148.9 2570.9 1754.7 2079.7 3666.4 2119.1 2318.6 2422.6 3597.8 3302.3 3712.8 True False 2511.581784439146 2701.747828798255 2003.5428452261551 2589.226593361282 3127.0774168507114 2343.3417554552643 2739.859607555477 2766.010968901342 2782.904044506017 2556.3081364530426 2790.8092919329047 0.8999474782096749 0.9680875854211571 0.7179074725806536 0.9277690886459651 1.1204912588939062 0.839663878943256 0.9817437599463702 0.9911142896423469 0.9971673996321645 0.9159737800222647 1.0 11.446467826843575 -6.523289106187033 24.999988230868826 0.992756206156199 0.8642993068618701 0.2536639206246605 0.08491616956092775 11.264594873149136 686266.8576223734 0.01066596745271855 0.022371635796848543 2.9971666660870187e-07 6.523289106187033 -0.1284568992943289 SLSDS(ph)ESDDSK ddPTM_A549_PD325901_60min_R1 2 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLSDS(0.996)ES(0.003)DDSK;SLSDS(0.998)ES(0.002)DDSK 312.95 5.7577999999999993e-129 196518000.0 35426.0 34571.0 35696.0 34923.0 39665.0 38921.0 35873.0 36697.0 35957.0 39387.0 38286.0 True False 39022.421440757185 37484.419496935036 38118.54521748564 37080.11439411239 36879.067236821444 38604.04028021641 37238.166645458805 35965.04954676041 34445.852333835726 36900.09809817252 33577.06471495038 1.1621748884851817 1.116369754627327 1.1352554352528959 1.1043286454280876 1.0983410119348769 1.1497145628405017 1.1090357945695681 1.0711195231650719 1.0258744362040233 1.0989673579698747 1.0 15.03518849587926 -8.564778014449177 1.4340704709425378 1.0092535089196184 1.1261134282692373 0.520997701516539 0.03246608624120374 0.08396441232041166 0.33563691496406267 0.0034903742216764564 0.0040303638384109304 2.7240933470466286e-09 8.564778014449177 0.11685991934961892 SLSDS(ph)ESDDSKSK ddPTM_A549_MK2206_60min_R1 2 SLSDSESDDSKSK 13 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.004)DS(0.995)ESDDSKSK;SLS(0.137)DS(0.862)ESDDSKSK 155.1 7.0388e-19 275030000.0 7999.3 10182.1 9816.4 8291.1 13247.2 7458.3 7774.200000000001 7602.1 16248.4 19724.2 18992.9 True False 9349.386275891882 10700.325398734567 11208.513128100552 10322.419872201626 11298.554428459729 8247.532355581141 9186.671509125239 8679.720955454839 12568.16334336304 15268.489520948164 14276.438752626706 0.6548822460483501 0.7495094248743109 0.7851056781256678 0.7230388510091438 0.7914126641968692 0.5777023597053352 0.6434848121654284 0.6079752174790697 0.880343029598375 1.0694886718957788 1.0 13.801348524555044 -8.952569253101904 3.515172683350562 0.9511073772288792 0.6959616939803388 0.7377400908117027 0.07728951059405506 0.09331838666453242 2.2525144769820824 0.014158825405991428 0.014599586639190662 1.115400274147298e-09 8.952569253101904 -0.25514568324854037 SLSDS(ph)ESDDSKSK ddPTM_A549_PD325901_60min_R1 3 SLSDSESDDSKSK 13 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 SLS(0.259)DS(0.732)ES(0.008)DDSKSK;SLS(0.002)DS(0.99)ES(0.001)DDS(0.008)KSK;SLS(0.016)DS(0.975)ES(0.009)DDSKSK 169.61 3.4867e-22 387203000.0 22260.8 23536.4 23688.5 27746.899999999998 27735.800000000003 36319.0 29849.1 32864.2 30214.6 29752.9 31679.4 True False 24520.700028465162 25519.89502900298 25296.144060522438 29460.76299521796 25787.733091315567 36023.23010552607 30985.023834554235 32208.697749533836 28944.785436101825 27874.296816338323 27783.03463226241 0.8825781759632212 0.9185423898715724 0.9104888791071034 1.0603867930613788 0.9281827357105964 1.2965909081686462 1.115249800630979 1.1592937263999314 1.041815115563019 1.0032848169857564 1.0 14.761916567414781 -6.257300084751752 18.870254392506283 1.0523411206531204 0.9053366215908992 0.3834030041148746 0.09366776657131708 11.28890011361534 51449.467438041 0.013622993988215228 0.03444837202627335 5.529678925821465e-07 6.257300084751752 -0.14700449906222113 SLSDSESDDSK ddPTM_A549_PD325901_60min_R1 1 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 0 135.55 1.2845000000000002e-07 9041400.0 6780.7 7479.7 7112.2 7580.7 8250.2 7868.0 7339.6 7525.6 8299.5 8147.8 8249.6 False True 7469.0716723124915 8110.040569009429 7594.876661132936 8048.942621981157 7670.734413644879 7803.925616627087 7618.912494383232 7375.496004281011 7950.7008772887 7633.346517487757 7234.951498523078 1.032359605152461 1.12095299749625 1.0497481099470165 1.1125081658977596 1.0602330112663174 1.0786424232726588 1.0530702929989972 1.0194257702745655 1.098929395575317 1.0550653337546225 1.0 12.820767629950563 -10.94769093578598 1.0794595192215688 0.9979029856283631 1.072395473274272 0.11033201903391077 0.03422569282435227 0.39975941201934456 0.7879285071916863 0.023573688301300015 0.0048928242125867855 1.1279999079685182e-11 10.94769093578598 0.07449248764590888 SLSES(ph)S(ph)VIMDR ddPTM_A549_PD325901_60min_R1 1 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 2 S(0.048)LS(0.201)ES(0.888)S(0.863)VIMDR 67.89699999999999 0.0050448 1524300.0 188.99 332.91 444.12 380.94 375.32 263.14 226.93 556.24 386.64 267.57 359.6 True False 208.17612567291536 360.96549404774646 474.2606539105146 404.4697986224891 348.9588179837088 260.99707508378907 235.5659453308608 545.1453568381614 370.39086537681794 250.67558453621822 315.37147969221553 0.6600981353040652 1.1445724083865416 1.5038159264539894 1.2825186317330548 1.1065008742206892 0.8275861702475672 0.7469475222070165 1.7285816630286037 1.174458976881163 0.7948581297866986 1.0 8.30090838710336 -10.730290089106935 1.2353564396863264 1.0071431234852257 1.1431662760213481 0.05629872909130129 0.3062197612569768 1.5649202823970112 4.543396471520912 0.15805883646308666 0.05039611969102081 1.8608437618280802e-11 10.730290089106935 0.1360231525361224 SLSES(ph)SVIMDR ddPTM_A549_MK2206_60min_R1 1 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 S(0.001)LS(0.117)ES(0.779)S(0.103)VIMDR 122.18 3.176e-06 19817000.0 2104.7 2425.8 1859.8 1850.5 2964.7 1926.7 2203.4 2104.7 2737.9 3253.6 2916.5 True False 2459.9219050253955 2549.2628585704647 2123.547605603011 2303.8725830721014 2528.596557314343 2130.5821151600485 2603.7292587284287 2403.047670373423 2117.7700215278833 2518.6095002766638 2192.2525586948714 1.1220978601525171 1.1628508989348083 0.9686601104332784 1.0509156775456938 1.1534239279527674 0.9718689147880217 1.1876958466311585 1.0961545743634784 0.9660246549278381 1.1488683136837503 1.0 11.09819829837451 -8.758194815349032 24.94875994024194 0.9839560841132673 1.0878806349721946 0.0 0.0841710758872733 67.7704400391195 521113.30127775803 0.011132557038618962 0.012367299825816355 1.7450391895306988e-09 8.758194815349032 0.10392455085892727 SLSES(ph)SVIMDR ddPTM_A549_PD325901_60min_R1 2 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 S(0.001)LS(0.217)ES(0.775)S(0.007)VIMDR;S(0.009)LS(0.201)ES(0.766)S(0.025)VIMDR 153.25 8.091399999999999e-13 54635000.0 10695.9 10256.7 10678.9 8882.3 12356.2 11301.1 10108.5 11591.599999999999 10976.6 11449.099999999999 13066.1 True False 11781.739894094582 11121.068104891778 11403.634371442378 9430.93949783308 11488.343138575898 11209.06758846777 10493.184499083443 11360.396444565718 10515.291674154729 10726.201872084373 11459.052532832186 1.0281600385667 0.9705050284941077 0.9951638094658328 0.8230121531262548 1.0025561106086032 0.9781845014107261 0.9157113530127067 0.9913905544997023 0.9176405853823065 0.9360461383130877 1.0 13.48420014243199 -11.130146245478935 1.501384543976712 0.9999250559835536 0.9516963973346456 0.0 0.057025354285160104 0.7836021337548797 3.170945378868907 0.037212809341815874 0.008062382059180348 7.410606525445386e-12 11.130146245478935 -0.04822865864890802 SLSGS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 SLSGSPLK 8 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.036)LS(0.141)GS(0.822)PLK;SLS(0.002)GS(0.998)PLK 176.6 2.4503e-06 451970000.0 21358.7 21384.8 20632.0 17165.6 25706.0 21912.7 20253.8 20691.0 26415.0 26422.0 28073.0 True False 24963.526389920626 22473.194978134088 23557.9278410589 21371.172770593068 21924.681452532303 24231.48736952695 23933.653290566344 23624.012613529947 20432.04467608718 20453.25184912404 21101.699324615493 1.183010240355394 1.0649945595575196 1.1163995599908 1.0127702248919466 1.039000751326069 1.14831924181862 1.1342050193392401 1.1195312875097283 0.968265368668809 0.9692703670203932 1.0 14.36507156371787 -8.762588700437517 24.999999296349795 0.9850141966041025 1.0990127385563186 0.5740062347490658 0.04709559117237156 16.78113791677262 365021.5682424198 0.008219202176455973 0.00899353812490704 1.727473124837228e-09 8.762588700437517 0.11399854195221615 SLSGS(ph)PLK ddPTM_A549_PD325901_60min_R1 3 SLSGSPLK 8 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 SLS(0.182)GS(0.817)PLK;SLS(0.021)GS(0.979)PLK;S(0.004)LS(0.076)GS(0.92)PLK 136.52 0.0010856 427811600.0 15714.9 16012.6 15977.6 15664.7 20801.8 17262.3 16879.8 15998.9 16670.5 15968.4 18762.9 True False 17310.265079302077 17362.037998224594 17061.93601711391 16632.27294188507 19340.75333031419 17121.721552097315 17522.170025980984 15679.789388605748 15969.896858225347 14960.152498815809 16455.182247822777 1.051964348896375 1.0551106476211654 1.036873111470486 1.0107620013801866 1.175359411948975 1.0405063459180302 1.064842051706804 0.9528785006729644 0.9705086590784104 0.9091453545459954 1.0 14.006254384533383 -8.248289928730783 24.341612771183176 0.9831947845046122 1.062494823565014 0.5152603296376755 0.04629091942571772 364.52773603873254 674795.3711464219 0.006436687359273501 0.00828208578604725 5.645599568978261e-09 8.248289928730783 0.07930003906040184 SLSGS(ph)PLKVK ddPTM_A549_MK2206_60min_R1 4 SLSGSPLKVK 10 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.049)LS(0.067)GS(0.884)PLKVK;S(0.039)LS(0.016)GS(0.945)PLKVK;SLS(0.006)GS(0.994)PLKVK;S(0.012)LS(0.196)GS(0.792)PLKVK 89.43 0.00019045 141391200.0 18440.4 25292.7 26821.699999999997 23608.899999999998 32488.5 19873.9 18995.7 14553.400000000001 36875.3 35499.0 38582.200000000004 True False 21552.688695505443 26579.99039614361 30625.420374880236 29393.081559843806 27709.48468725571 21976.942906772856 22446.972805676527 16616.389017918256 28523.103427753824 27479.751244873765 29001.17492545078 0.7431660527860644 0.9165142606969902 1.056006194700893 1.0135134743816567 0.955460761796188 0.7577949156634473 0.7740021865796053 0.5729557185400819 0.9835154438078503 0.9475392398932828 1.0 14.82382372892017 -8.954416822133767 24.99998173530557 0.9927283738381326 0.8561876378392302 0.15512938995089842 0.1313212711343882 167.51870734735002 91875.5044532914 0.024322576342753102 0.02588345761432551 1.1106652341403826e-09 8.954416822133767 -0.13654073599890237 SLSGS(ph)PLKVK ddPTM_A549_PD325901_60min_R1 3 SLSGSPLKVK 10 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.002)LS(0.119)GS(0.879)PLKVK;SLS(0.002)GS(0.998)PLKVK;S(0.001)LS(0.061)GS(0.938)PLKVK 103.88 0.00010979 241384400.0 22589.300000000003 22447.4 27572.1 29514.2 27896.1 41911.5 35659.3 42307.0 33449.9 28648.5 30146.4 True False 24882.54910663626 24339.121177157143 29443.30851050636 31337.22510238845 25936.774172320544 41570.18663971356 37016.33417501769 41463.153695800545 32044.117028160646 26839.628820816404 26438.58391377474 0.9411453044454559 0.9205909536053571 1.1136492259392958 1.1852837960077534 0.9810197950430791 1.5723303023826143 1.4000876255604542 1.5682819409324669 1.212020928680124 1.01516892539894 1.0 14.690357285771526 -5.878421663366066 2.6423575120178433 1.1868536772760778 0.9226881442426725 0.2295061295561901 0.201843156624485 0.3943105999386348 5.4218727893974235 0.03186106203481417 0.1318531751398046 1.3230563351102377e-06 5.878421663366066 -0.2641655330334053 SLSGS(ph)SPCPK ddPTM_A549_PD325901_60min_R1 2 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLSGS(0.5)S(0.5)PCPK;SLSGS(0.5)S(0.5)PCPK 168.3 2.2876e-10 211130000.0 23248.0 24915.0 26889.0 24503.0 28269.0 23755.0 27558.0 27605.0 22882.0 24729.0 28223.0 True False 25608.119845726953 27014.6744892001 28713.849236692375 26016.494659649394 26283.482962755705 23561.547155945147 28606.73477031623 27054.396619296444 21920.349114298442 23167.606719722455 24751.74992033759 1.034598358828994 1.0914248316238502 1.160073503049547 1.0510971847801602 1.061883828309026 0.9519143992556868 1.1557459517967716 1.0930296527061651 0.8856080553838866 0.9359987392522295 1.0 14.595242905232512 -8.749453193290908 24.998029661463118 0.945981580969917 1.075714774503561 0.5050925795495488 0.059195390076943216 147.62730328969883 307886.8498766002 0.011186646583942469 0.012636556956400731 1.7805197965813586e-09 8.749453193290908 0.12973319353364388 SLSGSS(ph)PCPK ddPTM_A549_MK2206_60min_R1 2 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLSGS(0.04)S(0.96)PCPK;SLSGS(0.063)S(0.937)PCPK 197.94 2.6190000000000003e-19 111959000.0 12227.9 13406.4 12755.2 11684.9 18504.7 13810.1 12620.4 12783.4 19436.8 20067.9 21646.5 True False 14291.670576547735 14088.728496635775 14564.079158504966 14547.701024555101 15782.683143027865 15271.475615597537 14913.363318896381 14595.48609752061 15034.395834191599 15534.547452238146 16271.07663699246 0.878348181585936 0.8658756154220861 0.8950900719988856 0.8940834923904637 0.9699839472912182 0.9385657726470097 0.9165566392202158 0.897020303151767 0.9239951460870601 0.9547338383816713 1.0 13.990022095062663 -14.999999999999941 0.10851218269139191 1.2991372475515246 0.8533732039803659 0.513276454162187 0.027380761471733593 43.63355228364388 0.3361183303317237 2.9122118622674202 0.14289913405020388 1.000000000000135e-15 14.999999999999941 -0.44576404357115873 SLSKPEPTYVS(ph)PPCPR ddPTM_A549_PD325901_60min_R1 2 SLSKPEPTYVSPPCPR 16 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SLS(0.001)KPEPT(0.007)Y(0.001)VS(0.99)PPCPR;SLSKPEPT(0.011)Y(0.005)VS(0.984)PPCPR 60.621 0.0011574000000000003 9817800.0 5017.3 5700.5 6108.700000000001 5958.299999999999 5796.7 5757.1 6789.7 6607.0 5157.9 6018.6 6326.0 True False 5526.652602458958 6180.901140906488 6523.2731165972245 6326.330658718895 5389.559789529379 5710.216086360421 7048.085748966398 6475.218201908771 4941.131400080414 5638.584568859302 5547.942103818006 0.9961626309430308 1.1140889766410664 1.1758005030564416 1.1403022130251168 0.9714520607236273 1.0292494008599586 1.2703964131341632 1.1671387481590028 0.8906241823756605 1.0163380336970202 1.0 12.437737016993669 -8.761348408979183 24.999999999986645 0.948350305554505 1.1098354169348663 0.3286743786258728 0.08715145938440162 1.8115524646108498 497761.94348239223 0.015723780774168996 0.017282798596396573 1.7324136263246317e-09 8.761348408979183 0.16148511138036137 SLSKS(ph)DSDLLTCSPTEDATMGSR ddPTM_A549_MK2206_60min_R1 1 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.178)LS(0.154)KS(0.624)DS(0.045)DLLTCSPTEDATMGSR 83.557 8.8315e-06 7423000.0 1822.6 2326.2 2020.6 1197.3 2524.8 2001.5 2031.2 2052.2 3228.4 3068.7 2577.5 True False 2130.210321708217 2444.59364399646 2307.1514635344893 1490.6385537488395 2153.4052645823363 2213.2974015118275 2400.2427477213346 2343.105634598916 2497.1725546954303 2375.478538695289 1937.4356146189025 1.099499929512359 1.2617676817494223 1.1908274247288009 0.7693874018322158 1.111471910774137 1.1423850087256642 1.2388761358624385 1.2093850329368543 1.2889060858864356 1.2260941838640405 1.0 10.919932651816216 -7.210323362007873 5.06574566349363 1.1546531854871938 1.0836017394227746 0.0951214647080939 0.13483264390920904 0.6380796804047055 37.1745039108008 0.023416273094119436 0.040696357946203514 6.161360754940794e-08 7.210323362007873 -0.07105144606441915 SLSKS(ph)DSDLLTCSPTEDATMGSR ddPTM_A549_PD325901_60min_R1 2 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.101)LS(0.333)KS(0.39)DS(0.169)DLLT(0.006)CS(0.001)PTEDATMGSR;S(0.028)LS(0.157)KS(0.783)DS(0.032)DLLTCSPTEDATMGSR 131.1 1.4528000000000001e-22 43123000.0 6231.4 7001.5 6961.7 6328.9 7437.5 7734.200000000001 7326.7 7620.799999999999 6976.4 8087.6 7873.0 True False 6864.007140685775 7591.540976766389 7434.1628261029155 6719.821779025226 6915.11565798208 7671.215239465838 7605.521577824082 7468.797165598051 6683.206169084508 7576.947555761552 6904.670911058987 0.9941106866790592 1.0994790446286533 1.0766860465711492 0.9732283935882166 1.0015127074204744 1.1110182278461818 1.1015038480172263 1.0817021204639197 0.9679253732976952 1.0973654868367153 1.0 12.753356939363032 -8.765725527357082 24.993914551393615 0.9848536458009531 1.0560383842496772 0.0 0.05632891950905979 93.63468768564454 546013.1764754115 0.008127932171665526 0.008797965400070773 1.7150408650930658e-09 8.765725527357082 0.07118473844872408 SLSKSDS(ph)DLLTCSPTEDATMGSR ddPTM_A549_MK2206_60min_R1 1 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.127)LS(0.237)KS(0.262)DS(0.32)DLLT(0.052)CS(0.002)PT(0.001)EDATMGSR 47.286 0.0028462 9137600.0 1411.9 2237.7 1511.0 1754.9 1858.0 1858.7 1676.6 1791.9 2409.6 1988.1 2534.0 True False 1650.1942023591744 2351.589372010525 1725.2825207367187 2184.8505787804547 1584.6906612777175 2055.386400294796 1981.21651773808 2045.9073124635986 1863.829447340513 1538.9868292045826 1904.7378651578265 0.8663628904245253 1.2346000019355274 0.9057847551078961 1.14706103067858 0.8319730973303301 1.0790914791440276 1.0401517993521467 1.0741148952242174 0.9785228095867545 0.8079782826583658 1.0 10.895376748701555 SLSLESTDRGS(ph)WDP ddPTM_A549_PD325901_60min_R1 2 SLSLESTDRGSWDP 14 1 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6;H0Y7V8 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 SLSLES(0.007)T(0.006)DRGS(0.987)WDP;SLSLES(0.001)T(0.005)DRGS(0.994)WDP 100.11 2.6913e-05 5228500.0 3581.3 3043.0 3375.2 3202.2 3055.0 3123.9 3179.0 2958.6 4097.0 3727.1000000000004 4248.9 True False 3944.8709395862825 3299.444289409428 3604.2613687263997 3399.9926212761434 2840.427339177851 3098.4599941257434 3299.9785846155496 2899.588402023201 3924.817337701281 3491.7702699291344 3726.3122359962576 1.0586528153703125 0.8854449333409917 0.9672462049500726 0.9124282684720137 0.7622623009793063 0.831508418482636 0.885588317784453 0.7781388725327721 1.0532711939132366 0.9370578869367299 1.0 11.863532850635218 -8.782396014510915 24.99632620405777 1.025155857475692 0.8829429473148693 0.24489567305237248 0.08325286936136682 172.7802513232456 206085.2584731229 0.013859071879266511 0.014761323404150541 1.650456131699464e-09 8.782396014510915 -0.14221291016082271 SLSNS(ph)NPDIS(ph)GTPTSPDDEVR ddPTM_A549_MK2206_60min_R1 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 2 S(0.067)LS(0.095)NS(0.805)NPDIS(0.338)GT(0.281)PT(0.241)S(0.174)PDDEVR 66.827 0.0013631 5566400.0 178.33 408.56 194.1 264.83 283.62 304.27 394.45 314.24 528.29 328.16 614.92 True False 208.42774425009688 429.3539588991465 221.6262986598261 329.7133618886704 241.89987370914207 336.46764944192023 466.11645915649876 358.7844823196392 408.6331585057766 254.02842808298175 462.2183930713695 0.45092914382988275 0.9288984716643491 0.47948394521289756 0.7133280865302142 0.5233454084372431 0.7279408489267268 1.0084333859135877 0.7762228584967638 0.8840694455936136 0.5495852867191248 1.0 8.852430859932667 -7.6053044837331685 4.821539906617811 0.9323032168017354 0.632888576204776 0.196768099326723 0.17761409088426164 0.11781359036064054 4.930843557425799 0.019362088872463476 0.02903538355501771 2.481392791545855e-08 7.6053044837331685 -0.29941464059695944 SLSNS(ph)NPDISGTPT(ph)SPDDEVR ddPTM_A549_PD325901_60min_R1 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 2 S(0.003)LS(0.031)NS(0.963)NPDIS(0.153)GT(0.08)PT(0.427)S(0.343)PDDEVR 114.46 2.4486000000000002e-14 6491400.0 422.17 497.74 577.44 482.06 532.92 352.76 671.83 460.26 389.59 467.26 428.52 True False 465.0283876148721 539.6862966186821 616.6285508288018 511.83575136230615 495.48953767419306 349.8872395172052 697.396858289482 451.07975323301486 373.21688713571933 437.75712385690946 375.81475661209157 1.2373872484599242 1.436043388726578 1.6407779098074997 1.3619362793957894 1.3184408780031684 0.9310098482331597 1.855693120132909 1.2002715308452092 0.9930873670321209 1.1648215408123357 1.0 8.553877906008772 -8.541191893576833 6.217310665033237 1.0005437333138822 1.395609023014114 0.31161938629472796 0.2234356634524212 0.11343362073494132 16.140369504511828 0.03494581550955341 0.040161814683692315 2.8761273133754018e-09 8.541191893576833 0.3950652897002318 SLSNS(ph)NPDISGTPTS(ph)PDDEVR ddPTM_A549_MK2206_60min_R1 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 2 S(0.003)LS(0.02)NS(0.934)NPDIS(0.08)GT(0.069)PT(0.162)S(0.732)PDDEVR 99.86 1.1785e-07 3430500.0 306.94 381.33 206.0 237.04 449.98 343.08 286.5 256.34 452.75 539.44 420.48 True False 358.7439680374851 400.7380682078802 235.21389759878508 295.1148106411298 383.78853808490146 379.3844978819274 338.55334148393183 292.67698000832587 350.2028478931844 417.5801293426492 316.06321134236885 1.135038673162386 1.2679048172227456 0.7441989107172443 0.9337208509264081 1.2142777909991258 1.2003437422236627 1.0711570639494674 0.9260077399241814 1.108015217607324 1.3211918197284729 1.0 8.30406931010835 SLSNS(ph)NPDISGTPTS(ph)PDDEVR ddPTM_A549_PD325901_60min_R1 1 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 2 S(0.001)LS(0.02)NS(0.979)NPDIS(0.001)GT(0.003)PT(0.234)S(0.762)PDDEVR 144.57 1.4692999999999999e-21 5063700.0 476.24 395.21 623.18 524.76 679.72 393.46 524.25 796.2 466.38 554.01 432.92 True False 524.5875342106419 428.51573368961544 665.4727422857657 557.1732333835706 631.9788121067004 390.25579221124735 544.2006206306073 780.3191663931832 446.7796704801379 519.029714052062 379.6735845059894 1.3816803581244839 1.1286424738955088 1.7527496498120683 1.4675059211942123 1.6645319503304312 1.0278718566081624 1.43333811684237 2.0552369146473333 1.1767467864836139 1.367041941375498 1.0 8.568615817839179 -8.979616350932371 24.073235561457356 1.0779758487236508 1.4825404795225576 0.17479254701984093 0.280995238836215 77.53703857209119 91573.47509266203 0.046781631226965485 0.04778997784792747 1.0480539740030126e-09 8.979616350932371 0.4045646307989068 SLSNS(ph)NPDISGTPTSPDDEVR ddPTM_A549_MK2206_60min_R1 2 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SLSNS(1)NPDISGTPTSPDDEVR;SLS(0.001)NS(0.999)NPDISGTPTSPDDEVR 351.14 3.4432999999999984e-231 98360000.0 3053.1 3029.1000000000004 3138.8999999999996 2263.81 4795.1 3370.5 3014.9 3637.6 5176.299999999999 4249.4 4430.2 True False 3568.3886388715905 3183.268251667818 3584.0432192855656 2818.443551626294 4089.7471420305615 3727.1640728431757 3562.6683045022883 4153.240939682786 4003.876314852543 3289.457588663526 3330.0590727001595 1.071569170686868 0.9559194543316863 1.0762701624927826 0.8463644308090231 1.2281305084220062 1.119248635376617 1.0698513830307277 1.2471973766865205 1.202343930675687 0.9878075784392282 1.0 11.701332054491857 -6.771085198759807 24.99999324693915 1.1167648336528122 0.9916113614167676 0.3035172191735901 0.0977663295807002 216.66485385929585 561552.0037525779 0.015017662134333325 0.028637222030741413 1.694005442274264e-07 6.771085198759807 -0.12515347223604456 SLSNS(ph)NPDISGTPTSPDDEVR ddPTM_A549_PD325901_60min_R1 2 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SLSNS(1)NPDISGTPTSPDDEVR;SLSNS(1)NPDISGTPTSPDDEVR 378.84 6.3025999999999966e-285 113983000.0 5117.1 4301.1 4517.2 4356.3 5253.4 4063.3 5366.1 5469.5 5802.5 5615.799999999999 5681.4 True False 5636.5842249900825 4663.568791711761 4823.764356130267 4625.378757124873 4884.419307246127 4030.2098319828206 5570.30987194259 5360.4065317602535 5558.641103737297 5261.217429601575 4982.623817361936 1.1312482000646775 0.9359664631838293 0.9681173078573333 0.9283018198178551 0.980290603161006 0.8088529216152277 1.1179471050037662 1.0758200354363368 1.115605212733145 1.0559130334641922 1.0 12.28268994090044 -7.811151727007404 24.999999940072232 1.062227611349394 0.9577714295842146 0.352624044701609 0.076443641552702 105.17543174040047 52891.583129615385 0.012294494567927625 0.016987300551874977 1.544714677024964e-08 7.811151727007404 -0.10445618176517946 SLSPILPGRHS(ph)PAPPPDPGFPAPSPPPADSPSEGFSLK ddPTM_A549_PD325901_60min_R1 1 SLSPILPGRHSPAPPPDPGFPAPSPPPADSPSEGFSLK 38 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.027)LS(0.025)PILPGRHS(0.948)PAPPPDPGFPAPSPPPADSPSEGFSLK 73.535 6.8146e-06 5394000.0 910.57 882.45 1003.0 847.23 1468.9 1021.0 1168.2 939.54 1012.9 1382.6 1074.9 True False 1003.0103960737948 956.817158458544 1071.06961152897 899.5614729010636 1365.7295314298997 1012.6853145114712 1212.6564902635691 920.8001376451285 970.331335454633 1295.3024000440082 942.6941143525091 1.0639828771634094 1.0149815766228 1.1361793769812976 0.9542453476745516 1.4487515203889365 1.0742459288684916 1.2863732485446608 0.9767750998186527 1.0293172734202403 1.3740431602606202 1.0 9.880645910520805 -8.314900934227246 24.99968182314841 1.0114508884249571 1.1371035721319738 0.0 0.16792349922402205 396.4402987398193 185382.4390885524 0.019790611292192135 0.02392569007688105 4.842828234676767e-09 8.314900934227246 0.12565268370701665 SLSPLIKFS(ph)PVEQR ddPTM_A549_PD325901_60min_R1 1 SLSPLIKFSPVEQR 14 1 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 S(0.003)LS(0.007)PLIKFS(0.99)PVEQR 48.907 0.0080228 3166600.0 1812.5 2029.5 2158.3 2074.9 2252.7 2263.6 2305.7 2200.6 2174.6 2101.7 2470.7 True False 1996.503665708023 2200.5330875308705 2304.7752169122377 2203.061860560198 2094.4781233931085 2245.165992094189 2393.4446752274534 2156.7073066626967 2083.209124375203 1968.9983033216338 2166.819563057722 0.9213982094986457 1.0155589902583182 1.0636673473908638 1.0167260339164248 0.9666139992005017 1.0361573387891643 1.1045888250380793 0.9953331340701229 0.9614132897321032 0.9087043226354614 1.0 11.08136330596626 -8.5123082619066 24.81008925662435 0.9815992695445613 1.020456351621173 0.1752542770930623 0.050453517795770744 729.0308447403632 1711119.2758763756 0.007674188973879551 0.008995629960111683 3.0739141781730204e-09 8.5123082619066 0.03885708207661176 SLSPS(ph)HLTEDR ddPTM_A549_MK2206_60min_R1 2 SLSPSHLTEDR 11 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.093)LS(0.301)PS(0.606)HLTEDR;S(0.051)LS(0.328)PS(0.62)HLT(0.001)EDR 116.54 2.6226999999999996e-10 14824000.0 467.52 602.47 472.65 438.04 396.05 306.86 358.46 481.64 716.63 865.67 771.95 True False 546.4259462334173 633.133149642571 539.6788771847854 545.3598196643626 337.79156964426267 339.3317215228176 423.5875420186042 549.9139449606386 554.3144492229545 670.1145457660743 580.2535102638452 0.941702094977338 1.0911319594683382 0.9300742996615217 0.9398647487998544 0.5821448102755407 0.5847990844010942 0.7300042731770741 0.9477132584869481 0.9552970200402647 1.154865130348576 1.0 9.180539535004842 -8.436563794113939 6.738888318741351 0.977557894869092 0.8280798285454529 0.2381929516959872 0.1557283506015877 0.3659594271450771 24.30745248113631 0.026991311976671716 0.032601212561199126 3.6596217992156847e-09 8.436563794113939 -0.14947806632363903 SLSRS(ph)PLPSR ddPTM_A549_MK2206_60min_R1 2 SLSRSPLPSR 10 1 Q9NYV4;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.032)LS(0.028)RS(0.939)PLPSR;S(0.003)LS(0.021)RS(0.967)PLPS(0.01)R 57.434 0.0036803000000000005 13170600.0 2162.6800000000003 2068.33 1425.3000000000002 1731.35 2095.7 2080.55 1626.1599999999999 1782.77 2567.1000000000004 3018.3 2691.3 True False 2527.6875115504945 2173.5991624482845 1627.4289720754784 2155.530827723255 1787.4253061570032 2300.712420042684 1921.6122226440157 2035.4831070041473 1985.6559488163298 2336.4639336996097 2022.9759338986821 1.2494896598592409 1.07445626318417 0.804472729904945 1.06552470130928 0.8835623183674136 1.137291048049567 0.9498937631653788 1.0061825614906657 0.981551938183254 1.154963781104787 1.0 10.982263441804182 -5.372881913692075 3.8578638606522886 0.986449079234549 1.2505366248226844 0.35074988125184814 0.09749156682404331 0.13138144435403873 3.0817627848268474 0.009788836794159136 0.07540158354892584 4.237581718318579e-06 5.372881913692075 0.2640875455881353 SLSRS(ph)PLPSR ddPTM_A549_PD325901_60min_R1 2 SLSRSPLPSR 10 1 Q9NYV4;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.049)LS(0.213)RS(0.738)PLPSR;S(0.002)LS(0.016)RS(0.978)PLPS(0.004)R 77.078 0.00039809 23947000.0 3268.2 3002.7 3416.9 3704.7000000000003 3931.7 3401.7 3503.2 4221.3 3863.3 3941.2999999999997 3960.6000000000004 True False 3599.98525807832 3255.7480669765673 3648.7913814888707 3933.53090501584 3655.550955628661 3373.9976830300407 3636.5161930245936 4137.102859954214 3700.9389359876427 3692.4456453735324 3473.471308311979 1.036422914870088 0.9373182554252276 1.050474023711482 1.1324495168861604 1.0524200809953337 0.971361898097762 1.046940040737475 1.191057156584012 1.0654871186444914 1.0630419305717453 1.0 11.762162465042769 -5.798142122930899 24.25108367254613 1.0484517736013634 0.9868705445948951 0.15542044589479354 0.06113948923284692 172.24322943403882 113808.31119895322 0.008948016629267445 0.0278218573774001 1.5916877617666846e-06 5.798142122930899 -0.06158122900646834 SLSS(ph)PGGPSKPK ddPTM_A549_MK2206_60min_R1 4 SLSSPGGPSKPK 12 1 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3QL04;J3QR12;Q9BZE9-4 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 SLS(0.018)S(0.982)PGGPSKPK;S(0.011)LS(0.095)S(0.894)PGGPSKPK;SLS(0.072)S(0.928)PGGPSKPK;S(0.024)LS(0.172)S(0.802)PGGPS(0.001)KPK 167.32 6.7905e-16 147688000.0 13352.9 14236.0 13654.300000000001 11625.7 17014.8 13661.9 13133.7 13549.699999999999 17617.3 19157.3 18537.3 True False 15606.543072938464 14960.551593127682 15590.685058170353 14473.997021897512 14511.945459369272 15107.593189964744 15519.92328463355 15470.411469215924 13627.009679047147 14829.652624677321 13933.976806547033 1.1200350976331148 1.0736742138180035 1.1188970151611632 1.0387556418995003 1.0414790881918703 1.0842269511218272 1.1138186535046724 1.1102653380294836 0.9779698838485469 1.0642799848575495 1.0 13.766319446553974 -8.766099671741097 24.998923485389987 0.98959688368392 1.0858102543305468 0.41971564091204794 0.03541797053154669 45.16885068338303 242296.1828164502 0.004939540527107122 0.005344949642932676 1.7135639948731152e-09 8.766099671741097 0.09621337064662683 SLSS(ph)PGGPSKPK ddPTM_A549_PD325901_60min_R1 3 SLSSPGGPSKPK 12 1 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3QL04;J3QR12;Q9BZE9-4 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 S(0.001)LS(0.003)S(0.996)PGGPSKPK;SLS(0.002)S(0.998)PGGPSKPK;SLS(0.005)S(0.995)PGGPSKPK 153.7 1.0276e-13 222948000.0 26364.4 24653.100000000002 25415.4 23814.0 29494.0 27480.7 27389.1 27535.6 26745.9 25931.399999999998 27813.1 True False 29040.89447955452 26730.70325706198 27140.241879215737 25284.93669448195 27422.443188776277 27256.906290397063 28431.407188390604 26986.38085673969 25621.862834372638 24294.08697851958 24392.265021767387 1.1905780153519465 1.0958680234577558 1.1126577156732302 1.036596505979168 1.1242270106652577 1.1174405601969846 1.1655911069766884 1.106349936451467 1.0504093331024393 0.9959750337592596 1.0 14.574136109965162 -9.01700169318615 1.5384317256276425 1.0166078606350935 1.1172575637031672 0.5979394030687727 0.038201539639141587 0.18636110173589895 0.8941081135133624 0.008013566875662256 0.0078015259369644315 9.61608529348192e-10 9.01700169318615 0.10064970306807375 SLSS(ph)PPSSK ddPTM_A549_MK2206_60min_R1 2 SLSSPPSSK 9 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 SLS(0.022)S(0.976)PPS(0.001)SK;SLS(0.031)S(0.962)PPS(0.006)S(0.001)K 105.2 0.00057833 10718000.0 6102.299999999999 7113.1 6634.4 5652.6 8781.8 6099.1 5850.4 6668.5 10260.8 8940.0 10550.9 True False 7132.219053089026 7475.126407493432 7575.257680725147 7037.4872537548545 7490.008853180112 6744.502713745086 6913.34195119579 7613.780296424746 7936.745183130617 6920.447790900344 7930.8203399738395 0.8993040754107603 0.9425413875304216 0.9551669759234686 0.8873593086308734 0.9444179204801931 0.8504167822022978 0.871705782609948 0.9600243064451842 1.0007470656127355 0.8726017605037781 1.0 12.95325438630397 -8.522020612379983 3.995865030150929 1.0000227589366724 0.9089865396902204 0.043111718379812425 0.04882300999683034 0.09874010672059488 3.6148101514941606 0.005215610215197314 0.006106650303287136 3.005933632345301e-09 8.522020612379983 -0.091036219246452 SLSS(ph)PPSSK ddPTM_A549_PD325901_60min_R1 2 SLSSPPSSK 9 0 Q5VW31;A0A1B0GWB8;A0A2R8Y7V8;Q5VW30;Q5VW27;A0A1B0GWI9;A0A1B0GU97;A0A0A0MRX8;A0A1B0GWJ4;A0A1B0GVN4;U3KQE8;A0A1B0GW37;Q5VW26;O00712-4;O00712;O00712-5;O00712-6 Q5VW31 NFIB Nuclear factor 1;Nuclear factor 1 B-type 1 S(0.297)LS(0.055)S(0.648)PPSSK;S(0.227)LS(0.144)S(0.628)PPSSK 144.17 3.434e-05 107687000.0 25954.0 26323.0 28618.0 28498.0 33596.0 29920.0 29254.0 31081.0 28979.0 31765.0 32790.0 True False 28588.83097367502 28541.331590576534 30560.18957401402 30258.256736346128 31236.332859908052 29676.341439944383 30367.27697840303 30461.06507242718 27761.11340718708 29759.352478951187 28757.037872935878 0.9941507571119081 0.9924990089969471 1.0627029706274145 1.0522035290993268 1.086215242262678 1.031967950630746 1.0559946094789756 1.059256005678353 0.9653676268693135 1.03485458448273 1.0 14.811627457756698 -8.760320352129169 24.999826485449866 0.9836458225081576 1.0428851197664435 0.21314337562078023 0.031700043396130605 19.92964001605028 445243.3607436175 0.005175710997429489 0.005708701643490582 1.7365194334181997e-09 8.760320352129169 0.05923929725828592 SLSS(ph)PTDNLELSLR ddPTM_A549_PD325901_60min_R1 2 SLSSPTDNLELSLR 14 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 S(0.003)LS(0.077)S(0.913)PT(0.007)DNLELSLR;S(0.013)LS(0.073)S(0.908)PT(0.006)DNLELSLR 280.5 3.0302999999999996e-99 125548000.0 13298.3 12808.7 14263.900000000001 15233.0 15679.9 14197.900000000001 15703.2 15219.900000000001 15623.9 16499.5 16623.4 True False 14648.33362630895 13888.134101136555 15231.93402979868 16173.907813346903 14578.597916718421 14082.277009698748 16300.793869120758 14916.327154719424 14967.281816575802 15457.718754177717 14578.827184414828 1.0047676291799676 0.952623549580405 1.0447983117655748 1.1094107645803815 0.9999842739272847 0.9659403209575798 1.1181142119955136 1.0231500082987055 1.0266451222205475 1.0602854782929623 1.0 13.831587044119297 SLSS(ph)PTVTLSAPLEGAK ddPTM_A549_MK2206_60min_R1 2 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 SLS(0.354)S(0.646)PTVTLSAPLEGAK;S(0.253)LS(0.253)S(0.304)PT(0.186)VT(0.003)LSAPLEGAK 296.13 6.709199999999998e-133 121468100.0 2457.5699999999997 2842.73 3681.8599999999997 2656.4700000000003 4583.429999999999 2853.7200000000003 2487.83 3210.54 5267.32 4677.55 4458.0199999999995 True False 2872.3477341821917 2987.4128147184488 4204.003111713898 3307.3052692534716 3909.213518633007 3155.6987562539757 2939.8365080068756 3665.6438768663907 4074.28043018162 3620.888206300439 3350.9705989072177 0.8571688856711815 0.8915067221695921 1.2545628162434077 0.9869693486215648 1.1665914108311894 0.94172678127438 0.8773089531031945 1.0939051145545087 1.2158508437854634 1.0805490825497674 1.0 11.710363313192882 -8.485518944737652 24.491519896552013 1.1047163485544111 1.0050026976652529 0.13153373881566965 0.12345868633039227 787.8792693501453 516501.65367621824 0.022316569662052237 0.026975325477071474 3.2694978436207323e-09 8.485518944737652 -0.09971365088915829 SLSS(ph)SPDKR ddPTM_A549_MK2206_60min_R1 1 SLSSSPDKR 9 1 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 PHF20 PHD finger protein 20 1 SLS(0.118)S(0.648)S(0.234)PDKR 93.111 0.00079237 7128500.0 1498.2 2111.3 1239.8 2005.7 2159.6 1630.0 1090.5 1422.2 2978.5 2290.8 2046.0 True False 1751.059532526749 2218.7561519085752 1415.6222827328813 2497.0965900392953 1841.925700804821 1802.4855180935697 1288.6297343393628 1623.801205304833 2303.8745056871335 1773.3066889703039 1537.9217332726578 1.1385881964230649 1.442697702949499 0.9204774548055015 1.6236824904772873 1.1976719367150437 1.1720268197640507 0.8379033252863863 1.0558412500286514 1.4980440524658871 1.1530539237499122 1.0 10.586766369306075 -6.960853368351891 24.999583894767994 1.188510503958503 1.2850539706036352 0.0571906060154167 0.22709463651868822 571.655229297391 365064.721724161 0.03749482582484157 0.07085846176150883 1.0943257831406212e-07 6.960853368351891 0.09654346664513214 SLSS(ph)SPDKR ddPTM_A549_PD325901_60min_R1 1 SLSSSPDKR 9 1 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 PHF20 PHD finger protein 20 1 SLS(0.009)S(0.496)S(0.496)PDKR 112.13 0.00023445 19703000.0 1857.8 2733.4 2336.4 3478.0 2747.2 2670.0 2483.8 2599.0 3455.6 3108.5 2976.9 True False 2046.4024883599243 2963.7532108681357 2494.962153914542 3692.8281608888956 2554.246149325495 2648.256405235679 2578.322368187512 2547.160906123942 3310.3731491727 2912.22877950007 2610.760172123904 0.7838339615450531 1.1352069954618103 0.9556458615211837 1.4144647219299 0.9783534223473183 1.0143621897990236 0.9875753413573782 0.97563956020203 1.2679729009653335 1.1154715820300396 1.0 11.350254220528482 -8.712187177639006 24.99989710186885 1.1265438926546683 1.0406952164576044 0.06838104736050155 0.15655943665045138 277.6464084820561 140929.9515756986 0.02800849063524923 0.03175861605221459 1.9400495506883106e-09 8.712187177639006 -0.08584867619706382 SLSS(ph)SPQAQPPRPAELSDEEVAELFQR ddPTM_A549_MK2206_60min_R1 1 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 S(0.006)LS(0.108)S(0.467)S(0.419)PQAQPPRPAELS(0.001)DEEVAELFQR 69.20100000000001 6.4847e-05 30323000.0 481.41 429.74 495.96 621.01 838.4 786.12 299.05 1014.7 1012.6 787.61 1359.8 True False 562.6602386555213 451.61193043205213 566.2945856946282 773.1574778781983 715.0724706217645 869.3066966157772 353.38351403410053 1158.5368323884225 783.2477167899249 609.6883539810983 1022.1241314292078 0.5504813176348445 0.4418366777042782 0.5540369983269979 0.7564222916810639 0.6995945488752903 0.8504903366289277 0.345734439847315 1.1334600140674427 0.7662941248581338 0.5964914976898041 1.0 9.997354699061416 -5.718454605372808 0.12437011118137098 1.1328503552280118 4.2909849249007027e-11 0.13790539748444197 0.20849042885997005 18.43461622849187 0.4190931477843464 0.815437414803298 3.7448510435969213 1.912253192408158e-06 5.718454605372808 -1.132850355185102 SLSS(ph)SPQAQPPRPAELSDEEVAELFQR ddPTM_A549_PD325901_60min_R1 2 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 S(0.003)LS(0.081)S(0.458)S(0.458)PQAQPPRPAELSDEEVAELFQR;S(0.007)LS(0.111)S(0.463)S(0.418)PQAQPPRPAELSDEEVAELFQR 79.021 1.3628000000000001e-06 63548700.0 1694.75 1833.69 1673.44 1705.1399999999999 2328.5 1526.62 1511.5700000000002 2124.62 2050.88 2281.07 2003.77 True False 1866.7997723909896 1988.2214916356143 1787.009701612201 1810.4626251460868 2164.954192888913 1514.1877128692481 1569.0936235128424 2082.2427873678544 1964.6886457273147 2137.0428509101594 1757.3189929445787 1.0622998897103844 1.1313947550889059 1.0168954576754858 1.0302413121435967 1.2319642600921858 0.8616464733770745 0.8928906076885084 1.1848974464669222 1.118003420901555 1.2160813486282944 1.0 10.779160381396823 -5.76274489956398 24.950620585375173 1.0496884873944075 1.0968471720445188 0.0054389564555078485 0.11681935820331012 110.22931170994237 2106892.454745204 0.01465438669322855 0.049515478601088826 1.7268519304946444e-06 5.76274489956398 0.047158684650111304 SLSS(ph)SPVKK ddPTM_A549_MK2206_60min_R1 1 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.009)LS(0.081)S(0.455)S(0.455)PVKK 40.589 0.040652999999999995 118800000.0 3552.1 3527.0 4149.0 3649.2 4854.5 3380.3 3209.1 2964.6 4799.6 4329.0 4985.7 True False 4151.6076394929 3706.509234964973 4737.390588045435 4543.25416381881 4140.409480717263 3738.0011023384586 3792.1519307367726 3384.8411287067283 3712.4982633862587 3351.0758933789252 3747.6130916800994 1.1078004953899028 0.9890319903070093 1.2641087732783018 1.2123060872812823 1.1048124177784502 0.9974351703053391 1.0118845883945575 0.9031991953014723 0.9906300817520898 0.8941893977311831 1.0 11.871756299684916 -7.202770446776032 3.5424729436553775 0.9887730949765624 1.142431075616514 0.5530234711308117 0.07483192371707308 0.15169738546701403 3.8337966552007057 0.010437673798206478 0.01841840017396315 6.269451588984719e-08 7.202770446776032 0.1536579806399515 SLSSPTDNLELS(ph)LR ddPTM_A549_PD325901_60min_R1 1 SLSSPTDNLELSLR 14 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 SLSSPT(0.001)DNLELS(0.999)LR 54.812 0.017218 2098300.0 2105.9 2299.7 2258.7 2329.8 2361.3 2128.7 2334.1 2207.9 2400.7 2526.2 2731.4 True False 2319.6894177183585 2493.5037897978523 2411.988964666484 2473.7064546402967 2195.450434042768 2111.3645729682366 2422.925452768528 2163.861702435958 2299.8069276591323 2366.69530087601 2395.4551157711826 0.968371063371633 1.0409311255223015 1.0069021743661346 1.032666585298937 0.9165066043560469 0.8814043557182297 1.0114676901339066 0.9033196607148005 0.9600709746209302 0.9879940080255214 1.0 11.226084066255543 -6.735643770671085 24.999094919617534 0.9656839136908049 1.0138890149005333 0.2805097712923875 0.0430837742675463 287.11796132130513 278250.77931127936 0.006425408031391157 0.013372026064617024 1.838045378867517e-07 6.735643770671085 0.04820510120972843 SLSSS(ph)LDDTEVK ddPTM_A549_MK2206_60min_R1 1 SLSSSLDDTEVK 12 0 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 SLSS(0.146)S(0.853)LDDTEVK 122.39 1.0711e-05 1817500.0 1822.3 1675.0 1978.6 2198.9 2434.5 1925.0 1826.6 2212.3 2944.7 2890.8 2875.4 True False 2129.8596890425138 1760.250345496549 2259.195231985223 2737.6305987123715 2076.3882749626496 2128.702222288416 2158.4695761066296 2525.9002998846013 2277.7301517196256 2237.7662722522055 2161.3588229971633 0.9854262357460065 0.8144183773500432 1.045266157542684 1.2666247591948154 0.9606865148302007 0.9848907084000693 0.9986632266425215 1.1686630988842135 1.0538417441307084 1.0353515799607433 1.0 11.077722889106113 -5.785187249077357 24.442917109313186 1.0437177448374053 0.8999223436824918 0.29140001593249487 0.09263396993807733 149.24228233111492 153610.5975173112 0.012456483576001477 0.03876236070901672 1.6398825740105223e-06 5.785187249077357 -0.14379540115491352 SLSSS(ph)LDDTEVKK ddPTM_A549_MK2206_60min_R1 1 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 SLS(0.027)S(0.148)S(0.825)LDDTEVKK 121.13 3.9619e-06 6181900.0 3542.1 3786.3 3603.6 3704.0 4278.7 3090.0 3593.7 3376.9 5008.5 5157.9 5002.8 True False 4139.919883969429 3979.006497405126 4114.644666927095 4611.480166278877 3649.3088979596164 3416.981749024003 4246.628772393734 3855.5859163225196 3874.0827469310098 3992.726807682876 3760.466689744111 1.1009058783209535 1.0581150760508096 1.0941845803737422 1.2263052824947838 0.97044042642695 0.9086589593635035 1.129282379757685 1.0252945270962848 1.030213286424465 1.061763641883122 1.0 11.876696002202928 -6.791223482268507 24.999995044694135 1.0136173811440683 1.113631050572462 0.3650772690311811 0.0643088037417545 162.2457818206982 136184.48393417196 0.008861849978089614 0.0167488850716435 1.6172476089846251e-07 6.791223482268507 0.10001366942839374 SLSSS(ph)PDKR ddPTM_A549_MK2206_60min_R1 3 SLSSSPDKR 9 1 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 PHF20 PHD finger protein 20 1 SLS(0.002)S(0.017)S(0.981)PDKR;S(0.001)LS(0.018)S(0.118)S(0.863)PDKR;SLS(0.001)S(0.045)S(0.954)PDKR 106.4 0.00042482 102880200.0 12985.8 15893.300000000001 13951.6 13519.800000000001 18306.199999999997 13226.3 12963.0 12823.8 20575.399999999998 20099.300000000003 19732.6 True False 15177.485567671765 16702.201084227043 15930.146668636937 16832.151606926887 15613.382230076506 14625.898287092614 15318.209304210135 14641.612921240414 15915.104752162173 15558.8541704299 14832.450827945273 1.0232621529461892 1.126058078868466 1.0740063697783198 1.1348193095111465 1.05265019322767 0.98607428109834 1.0327497108805284 0.9871337576696827 1.0729922476585672 1.048973925544121 1.0 13.856469379579979 -6.992085864864985 24.355152903047035 1.0278068322771157 1.0913732475276487 0.42592094820046733 0.0365745215237957 113.11950126877012 348111.8273125743 0.005571381776795046 0.010513866997226808 1.0183900210780315e-07 6.992085864864985 0.06356641525053308 SLSSS(ph)PDKR ddPTM_A549_PD325901_60min_R1 3 SLSSSPDKR 9 1 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 PHF20 PHD finger protein 20 1 S(0.001)LS(0.031)S(0.186)S(0.782)PDKR;SLS(0.009)S(0.037)S(0.953)PDKR;SLS(0.001)S(0.006)S(0.993)PDKR 153.12 1.4125e-05 143516500.0 17209.199999999997 17895.5 19471.300000000003 18333.0 22002.4 19465.399999999998 18504.9 20350.300000000003 21777.8 20373.8 22233.9 True False 18956.265315256547 19403.616589262714 20792.739508438706 19465.3877727361 20457.027328159325 19306.880236132805 19209.114095769815 19944.39730199848 20862.554800339527 19087.394790985545 19499.271252304647 0.9721525009821113 0.9950944493358629 1.0663341844624672 0.9982623207231633 1.049117531802194 0.9901334253120304 0.9851195897128444 1.0228278300216591 1.0699145896477413 0.9788773407995737 1.0 14.251132586584223 -8.519813991474777 24.950488261368676 1.0337181684124692 1.0098404040035542 0.0 0.03432493005660527 239.5745368172032 1950412.0771762105 0.005920981689924306 0.006770503324639126 3.021245444136491e-09 8.519813991474777 -0.02387776440891498 SLSSS(ph)PVKK ddPTM_A549_PD325901_60min_R1 6 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 SLSS(0.01)S(0.99)PVKK;SLS(0.002)S(0.239)S(0.759)PVKK;SLS(0.001)S(0.012)S(0.987)PVKK;SLSS(0.012)S(0.988)PVKK;S(0.003)LS(0.021)S(0.131)S(0.846)PVKK;SLS(0.001)S(0.01)S(0.989)PVKK 137.95 3.4782e-05 439651000.0 25537.2 25719.6 24672.0 24625.799999999996 28858.4 29124.6 27174.300000000003 26557.2 26260.300000000003 27700.5 28072.199999999997 True False 28129.717744506983 27887.080954944053 26346.39028478838 26146.879736750358 26831.48554007531 28887.41891383037 28208.43285684754 26027.49581227963 25156.670913653157 25951.48570260308 24619.4973643376 1.1425788808042072 1.132723407884829 1.070143305319964 1.062039543285934 1.0898470079629599 1.1733553486626025 1.1457761480422695 1.0571903815543195 1.0218190299081278 1.0541029866919591 1.0 14.587513687375887 -8.559063742197976 2.9271869133327133 1.0100210810543075 1.11431556308 0.5687803072904627 0.03474233812366146 0.11925713442895595 2.0821577872646166 0.006115391605445539 0.007087521756610624 2.7601727108758204e-09 8.559063742197976 0.10429448202569236 SLSSSSIGS(ph)NS(ph)TYLTSK ddPTM_A549_PD325901_60min_R1 1 SLSSSSIGSNSTYLTSK 17 0 Q86SQ4-2;Q86SQ4;Q86SQ4-4;Q86SQ4-3 Q86SQ4-2 GPR126 G-protein coupled receptor 126 2 S(0.003)LS(0.004)S(0.007)S(0.02)S(0.248)IGS(0.596)NS(0.48)T(0.48)Y(0.138)LT(0.018)S(0.006)K 56.93600000000001 0.0099083 3257500.0 1539.8 1950.2 1244.6 1762.3 1840.6 2243.3 1746.8 2160.2 1731.9 1935.2 1920.4 True False 1696.1193624591524 2114.5501982274964 1329.0660403877914 1871.1532685263094 1711.3226057252866 2225.0313085637436 1813.2754298856362 2117.1131163558825 1659.114265844484 1813.011141736702 1684.2029744186057 1.0070753871246785 1.2555198098717575 0.7891364999201423 1.1110022348536939 1.016102353290311 1.321118263273365 1.0766371140696904 1.2570415493338738 0.9851035124891746 1.076480192277633 1.0 10.717850302247507 SLSSSSIGSNS(ph)TYLTSK ddPTM_A549_MK2206_60min_R1 1 SLSSSSIGSNSTYLTSK 17 0 Q86SQ4-2;Q86SQ4;Q86SQ4-4;Q86SQ4-3 Q86SQ4-2 GPR126 G-protein coupled receptor 126 1 SLSSSSIGS(0.012)NS(0.86)T(0.116)Y(0.012)LTSK 116.54 1.4052999999999999e-09 1415800.0 807.76 1294.3 1090.4 603.36 1527.2 1045.4 716.63 886.96 1429.6 1302.7 1358.0 True False 944.0901401640681 1360.1743415977214 1245.0351162219183 751.1832270858594 1302.5509030696073 1156.023534119642 846.8323947910292 1012.6892962010793 1105.7978826020908 1008.4191652355569 1020.771121106681 0.9248793589894292 1.3324968873757639 1.2197005680098971 0.7358978046630622 1.2760459971256157 1.1325002345935546 0.8296006590320912 0.99208262779139 1.0832965977752458 0.9878993874182759 1.0 9.995443703805478 SLSSSSIGSNST(ph)YLTSK ddPTM_A549_PD325901_60min_R1 1 SLSSSSIGSNSTYLTSK 17 0 Q86SQ4-2;Q86SQ4;Q86SQ4-4;Q86SQ4-3 Q86SQ4-2 GPR126 G-protein coupled receptor 126 1 SLSSSSIGSNS(0.26)T(0.739)YLTSK 173.03 6.6152e-30 3139200.0 1178.0 1453.9 1952.2 1579.5 1799.3 1962.5 1475.9 1897.7 1676.0 2257.9 1921.0 True False 1297.589692802234 1576.4252554624934 2084.688031532257 1677.0621276952306 1672.923375248022 1946.5180506648007 1532.0661821434696 1859.8488847831502 1605.563548446998 2115.335808664376 1684.729178222318 0.7702066952810875 0.9357143426018749 1.2374024611670613 0.9954490902002555 0.9929924624521829 1.1553892909474717 0.9093842511590293 1.1039453158552248 0.9530098779087726 1.2555939767698585 1.0 10.718300980141802 -5.353771534984594 4.131674799143534 1.0100892173207132 0.7684292711588918 0.2696255704637973 0.11958576464263083 0.1674709491979278 4.5907075917705615 0.01237254247983526 0.09253284187425903 4.428212617147304e-06 5.353771534984594 -0.2416599461618214 SLSSSSIGSNSTYLT(ph)SK ddPTM_A549_MK2206_60min_R1 2 SLSSSSIGSNSTYLTSK 17 0 Q86SQ4-2;Q86SQ4;Q86SQ4-4;Q86SQ4-3 Q86SQ4-2 GPR126 G-protein coupled receptor 126 1 SLSSSSIGSNSTYLT(0.95)S(0.05)K;SLSSSSIGSNSTYLT(0.971)S(0.029)K 202.03 2.5255e-48 4834500.0 2268.3 3142.2 2766.5 2879.6 3924.3 2943.9 2353.0 3018.8 4725.1 3914.4 3809.1 True False 2651.1335853894175 3302.1245585786614 3158.831299548733 3585.1021292701553 3347.040668488776 3255.4215439973364 2780.5096422746656 3446.724144687265 3654.8723944342014 3030.1343213311306 2863.195344188113 0.925935280933887 1.1533004778320535 1.103253854460444 1.2521332631206643 1.1689878845614925 1.136988976531199 0.9711211803688883 1.2038033491789633 1.2765012355350056 1.0583051301343727 1.0 11.48341038757967 -5.2586182211084544 23.460843839927946 1.137219966448327 0.9259351040927147 0.29499137356065164 0.09150504194909304 128.80913208548114 1071030.5144898505 0.015228576095084692 0.14441540538255954 5.512921124339599e-06 5.2586182211084544 -0.21128486235561217 SLST(ph)EVEPK ddPTM_A549_PD325901_60min_R1 1 SLSTEVEPK 9 0 Q8IWB9;A0A087WVA8;Q8IWB9-2 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 S(0.001)LS(0.258)T(0.741)EVEPK 112.89 0.00027565 9747200.0 3861.6 4734.7 4701.7 3969.1 6524.1 4868.5 5702.9 5488.1 5611.4 5929.2 6933.1 True False 4253.62678924033 5133.709785431092 5020.785635618901 4214.262292519873 6065.869722923151 4828.852550146029 5919.926980246626 5378.635540168836 5375.572372169146 5554.829300116399 6080.372652541983 0.6995667917593904 0.8443084131175537 0.8257365004626638 0.6930927647597459 0.9976147959265672 0.7941704935021147 0.9736125264907438 0.8845897854501111 0.8840860058012749 0.9135672462104977 1.0 12.569944030616979 -2.000000000038842 0.09067918322999322 1.0845863007802505 0.1630218601457786 0.4006846914922749 0.07902447359248588 79.5250801765746 0.5025680133987227 0.6476475831520003 9.141217931724686 0.009999999999105634 2.000000000038842 -0.921564440634472 SLSVLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SLSVLSPR 8 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 SLS(0.002)VLS(0.998)PR;SLS(0.001)VLS(0.999)PR 72.643 0.0055588 28529000.0 1359.02 1667.98 1559.74 1328.6799999999998 2118.0 1875.9 1594.13 1768.0900000000001 2783.1 2664.9 2065.39 True False 1588.3893511510498 1752.8730574813926 1780.9345856346065 1654.2066596467125 1806.4450056976348 2074.4064928783605 1883.762786247051 2018.7221720485325 2152.732293697452 2062.8972391465695 1552.4966611358807 1.0231193347552248 1.1290671995383919 1.147142296803131 1.0655138275379066 1.1635741647108944 1.3361745276544592 1.2133763848927057 1.3003069330735557 1.386626037651128 1.3287611437677782 1.0 10.600374450391008 -6.985315890287915 9.828733230977717 1.210438557816678 1.099865393945569 0.3056464761885068 0.1059072502114915 0.4698576332578425 287.4486650454829 0.021641445753442904 0.04056137539103277 1.0343895150141734e-07 6.985315890287915 -0.11057316387110916 SLSVLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SLSVLSPR 8 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 SLSVLS(1)PR;SLSVLS(1)PR 143.03 0.00098039 47342000.0 3177.5 3935.0 3425.2 3288.5 4030.2999999999997 3876.4 3674.2 4208.3 3815.4 3783.7 4368.6 True False 3500.0774608481306 4266.616259883701 3657.6546694008243 3491.6231762746233 3747.2256317801953 3844.8318836163253 3814.0236915993873 4124.362155152516 3655.0520064109032 3544.7965362697164 3831.2898948370744 0.9135506727289743 1.1136239692102805 0.954679695297859 0.9113440308914825 0.978058495868412 1.0035345769051567 0.9954933707154464 1.0764944100707117 0.9540003776107718 0.9252227405309561 1.0 11.903614476182359 SLSVS(ph)SDFLGK ddPTM_A549_MK2206_60min_R1 2 SLSVSSDFLGK 11 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 SLSVS(0.931)S(0.069)DFLGK;SLS(0.005)VS(0.974)S(0.021)DFLGK 164.9 8.381100000000001e-14 6228000.0 2698.63 2089.38 2247.63 3248.2 3591.8 3763.1000000000004 3986.0 3189.37 5090.0 4460.8 4896.0 True False 3154.092768831039 2195.7205175364656 2566.377731359017 4044.0091458172387 3063.4509780286876 4161.308744256385 4710.204604380283 3641.4729645359835 3937.123127059763 3453.1021818398513 3680.188077274158 0.8570466244125253 0.5966326914364638 0.6973496129740961 1.0988593682996104 0.8324169617705313 1.1307326302025802 1.279881491238632 0.9894801265790606 1.0698157388673222 0.9382950298555109 1.0 11.845563782253397 -6.25647268416814 24.319316436719635 1.0443447562744952 0.7049719082516143 0.5864347211462057 0.12158789248120895 135.98180736267017 665826.8087009529 0.015828697555012296 0.0404582352766645 5.540223892040577e-07 6.25647268416814 -0.3393728480228809 SLSVS(ph)SDFLGK ddPTM_A549_PD325901_60min_R1 2 SLSVSSDFLGK 11 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 SLSVS(0.978)S(0.022)DFLGK;S(0.002)LS(0.115)VS(0.744)S(0.139)DFLGK 167.71 5.7684e-15 12425000.0 5217.1 5612.8 5281.4 6077.5 6426.700000000001 6266.6 5967.4 6161.5 5891.5 6361.5 7559.8 True False 5746.73615137397 6085.810354123312 5639.827563638186 6452.893371996054 5975.310762911391 6215.566887284612 6194.492672486579 6038.6040488967565 5643.90074324313 5959.833804339618 6629.992525520602 0.8667786772388139 0.9179211485831111 0.8506536835341808 0.9732881820239094 0.9012545247842789 0.9374922917875465 0.9343136736040549 0.9108010341870773 0.851268040124971 0.8989201392608868 1.0 12.694791528544378 -11.01752257044944 1.3076249744359474 0.9999302458568005 0.9013882477430109 0.0 0.046213253580890665 0.30823099560217665 0.9397672830690696 0.02673689292652206 0.006065762143806977 9.60455901831053e-12 11.01752257044944 -0.09854199811378961 SLSYS(ph)PVER ddPTM_A549_MK2206_60min_R1 4 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLSYS(1)PVER;SLSYS(1)PVER;SLSYS(1)PVER;S(0.001)LSYS(0.999)PVER 169.76 1.9303e-07 200222000.0 17598.0 19857.8 16626.1 14056.8 23209.3 17244.4 16580.800000000003 17971.6 25284.300000000003 23205.8 26120.300000000003 True False 20568.11217020806 20868.47720047843 18983.930984792034 17500.71663103372 19795.242715173797 19069.190962093697 19593.316734648426 20519.129335716738 19557.446420730303 17963.593662871943 19633.908626393848 1.0475811292387478 1.0628794091679206 0.966895147880639 0.891351638843196 1.008217115188316 0.9712376340826502 0.9979325618491035 1.0450863211277701 0.996105604486681 0.9149270277607128 1.0 14.261059785903681 -7.989019435239529 24.564520140200777 1.0025756844867704 0.9892916552192894 0.0 0.0514593650059172 819.7546581930703 1833859.3221252933 0.007201460650883926 0.009947690060843357 1.025606028028737e-08 7.989019435239529 -0.013284029267480957 SLSYS(ph)PVER ddPTM_A549_PD325901_60min_R1 3 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLSYS(1)PVER;SLSYS(1)PVER;S(0.091)LS(0.091)YS(0.818)PVER 183.78 4.842e-11 355112000.0 21718.6 19546.5 20401.6 19000.399999999998 22884.2 21317.9 19606.4 20401.7 23685.3 23447.9 27047.3 True False 23923.456283611726 21193.752153447713 21786.175260787055 20174.011554960725 21276.89273820417 21144.294090327217 20352.532281033746 19994.772088675978 22689.889208849436 21967.39559235635 23720.653566961217 1.0085496260074798 0.8934725214724673 0.9184475123877465 0.8504829556239398 0.8969775085724963 0.8913875003755198 0.8580089171481058 0.8429266939139168 0.9565457016096952 0.9260872821376704 1.0 14.533856140058326 -8.954113685701662 4.802118188197894 0.9815920817752223 0.8929251205813188 0.27156154197333426 0.04584890939675379 0.1290821553265147 6.054748014336825 0.007699849926162048 0.00800395904392591 1.1114407462403203e-09 8.954113685701662 -0.08866696119390349 SLT(ph)AHSLLPLAEK ddPTM_A549_MK2206_60min_R1 3 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.449)LT(0.55)AHSLLPLAEK;S(0.099)LT(0.9)AHS(0.001)LLPLAEK;S(0.122)LT(0.877)AHS(0.001)LLPLAEK 95.06700000000001 0.00015192 52810100.0 2169.86 2664.05 3058.67 2373.25 3703.09 3152.3999999999996 2661.22 2924.3900000000003 3780.51 3731.23 3411.54 True False 2536.0793200163453 2799.6387659224374 3492.435398876097 2954.6963565392402 3158.370366453659 3485.9848756062347 3144.7292266103614 3338.931238068766 2924.230521233933 2888.342551548222 2564.360464285924 0.9889714629969332 1.091749309394391 1.3619128229106459 1.1522156879617975 1.2316405631893657 1.3593973718421632 1.2263210536924447 1.3020522210392642 1.1403352071442183 1.1263403065888846 1.0 11.324383356090578 -9.666156624736502 0.9967654244620593 1.0242493658327112 1.2164042922210179 0.18396628299560847 0.11126848142605009 0.37695898078157875 0.7781421713261474 0.03340689347320868 0.02187583500348279 2.1569663766646377e-10 9.666156624736502 0.19215492638830667 SLT(ph)AHSLLPLAEK ddPTM_A549_PD325901_60min_R1 2 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.422)LT(0.578)AHSLLPLAEK;S(0.428)LT(0.571)AHS(0.001)LLPLAEK 110.84 4.3891000000000004e-05 17704800.0 2856.6 2679.3999999999996 3001.5 2326.94 3850.6000000000004 3498.4 3626.6000000000004 3149.0 3525.2 3038.5 2883.3 True False 3146.5999290822283 2905.2024413551176 3205.1998394857437 2470.6697989358263 3580.1471398488497 3469.910190290824 3764.612247551668 3086.190724657289 3377.0481032132207 2846.648591446345 2528.6723787446167 1.2443683711388454 1.1489042494296682 1.267542551746856 0.9770620423996618 1.4158208749945882 1.3722260817407645 1.4887702650592662 1.220478679088296 1.3355024287052117 1.1257482841093043 1.0 11.304164414514773 -10.790683790078385 0.9895748213326736 0.9967436074017596 1.2766535855246555 0.2523251835516217 0.1350873751209479 0.4905857258611246 0.8365395867685271 0.09809316360772745 0.023475870025188073 1.6192585911263338e-11 10.790683790078385 0.27990997812289586 SLT(ph)NDWEDHLAVK ddPTM_A549_MK2206_60min_R1 2 SLTNDWEDHLAVK 13 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 1 S(0.1)LT(0.9)NDWEDHLAVK;S(0.12)LT(0.88)NDWEDHLAVK 158.64 1.6028e-18 8305300.0 2081.1000000000004 2075.6499999999996 1288.93 1391.13 2534.7 2043.79 1597.4299999999998 2220.7 3132.8 2264.7 2474.0 True False 2432.3388019899985 2181.2917191820356 1471.7196554951556 1731.9569124501993 2161.848987696785 2260.0625012419964 1887.6623535311585 2535.4910256085245 2423.2258020536024 1753.1026970975408 1859.6375210735853 1.3079639308341056 1.1729660724003657 0.7914013558112759 0.9313411311739532 1.162510953451149 1.2153242100305883 1.0150700510932873 1.3634329254363307 1.3030635135037782 0.9427120485746379 1.0 10.860805724537116 -6.8137780035783875 24.601959215876654 1.1599613614190953 1.0410987539912007 0.05658166176643975 0.17102110396763404 165.40725270633425 77749.58476899832 0.026099632908346104 0.04932372033375586 1.5354016268129498e-07 6.8137780035783875 -0.11886260742789467 SLT(ph)NDWEDHLAVK ddPTM_A549_PD325901_60min_R1 1 SLTNDWEDHLAVK 13 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 1 S(0.093)LT(0.907)NDWEDHLAVK 143.39 2.0106e-12 8157400.0 1984.7 1467.0 1725.4 1824.5 1240.6 1723.0 1256.8 1037.3 2278.9 1900.6 2317.5 True False 2186.1852829410814 1590.6292384369472 1842.4960196730642 1937.1952212598608 1153.4645358376567 1708.9684592588292 1304.6282117473486 1016.6102377538916 2183.125758088224 1780.5957916415757 2032.4621918429052 1.0756339240725505 0.7826119692758798 0.9065339700131927 0.9531273098385843 0.5675207836421152 0.840836531236651 0.641895439424827 0.5001865431169941 1.0741285947900987 0.8760781867371646 1.0 10.989012799989167 -8.832779321978729 24.99999949943542 1.0350058034227023 0.783241743223398 0.20471333549827597 0.1672022912043955 36.675658411993034 12851.728308582435 0.02764116162514497 0.02942614416625739 1.469672872706524e-09 8.832779321978729 -0.2517640601993043 SLT(ph)NSHLEKK ddPTM_A549_PD325901_60min_R1 1 SLTNSHLEKK 10 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.412)LT(0.512)NS(0.076)HLEKK 77.527 0.00053182 7284900.0 1398.2 1301.4 1653.4 1487.8 2033.3 2486.8 2163.5 2187.1 2311.6 2436.8 1803.3 True False 1540.1442346995632 1411.073545263697 1765.6096667018924 1579.6980269610406 1890.488022504198 2466.548325295912 2245.8331764126265 2143.4765747532406 2214.4514908055367 2282.9400321331113 1581.5055320605445 0.9738468841730249 0.8922343404168864 1.1164106801456954 0.998857098465442 1.195372374095385 1.559620421992609 1.4200602722435811 1.3553392835499625 1.4002173535999753 1.4435232668194764 1.0 10.627082887031687 -6.814032566479209 4.556007650020396 1.2540094781299551 0.9952408109904098 0.4747521284705697 0.15944404730793288 0.21991092261222944 9.504172094425293 0.029346784550749464 0.057887701144321804 1.5345019106526833e-07 6.814032566479209 -0.25876866713954527 SLT(ph)PAVPVESKPDKPSGK ddPTM_A549_MK2206_60min_R1 1 SLTPAVPVESKPDKPSGK 18 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;H0YA91;H0Y944;E7EQK6;P20810-5;F8W7E0;E9PCH5;P20810-3;P20810-2;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 S(0.059)LT(0.941)PAVPVESKPDKPSGK 84.166 4.1146e-05 4749400.0 2179.8 2489.3 2462.2 2230.1 2832.4 2227.3 2178.9 2858.7 3684.0 3928.8 3661.8 True False 2547.6969490066804 2615.994737340035 2811.3769838239236 2776.474600112993 2415.757712057592 2462.9914076379164 2574.777925861565 3263.9294794015796 2849.5798821391318 3041.2813513298966 2752.4739994612983 0.925602548654521 0.9504157851634659 1.021400014813638 1.0087196466365866 0.8776677681716133 0.8948282193110496 0.9354413252824509 1.1858166435143005 1.0352794913582613 1.104926459586947 1.0 11.42651322046793 SLT(ph)PAVPVESKPDKPSGK ddPTM_A549_PD325901_60min_R1 2 SLTPAVPVESKPDKPSGK 18 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;H0YA91;H0Y944;E7EQK6;P20810-5;F8W7E0;E9PCH5;P20810-3;P20810-2;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 S(0.147)LT(0.853)PAVPVESKPDKPSGK;S(0.023)LT(0.977)PAVPVESKPDKPSGK 111.49 6.414299999999999e-10 15112300.0 5881.3 5758.6 5920.200000000001 6978.799999999999 8397.9 7366.6 6958.0 8717.6 9250.7 7742.099999999999 7761.3 True False 6478.365246415773 6243.897431808459 6321.980373054637 7409.8646259952375 7808.060475182215 7306.608851988449 7222.790497563697 8543.720629175104 8861.925249175803 7253.262484724946 6806.709302934342 0.9517617042383429 0.9173151303988761 0.9287865974134167 1.088611882220514 1.1471123751114498 1.073442176947178 1.0611280981912925 1.2551910547277148 1.301939726639342 1.0656048557264075 1.0 12.7327417819107 -6.36344230913005 2.9658559712987884 1.1427536141666712 0.9282698107407071 0.5097851508246247 0.08353670194528677 0.2130941689879967 3.5901652544299285 0.01674500208930148 0.043728952734079125 4.3306959207507407e-07 6.36344230913005 -0.21448380342596407 SLT(ph)PPPSSTESK ddPTM_A549_MK2206_60min_R1 2 SLTPPPSSTESK 12 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 S(0.002)LT(0.997)PPPS(0.001)STESK;S(0.024)LT(0.976)PPPSSTESK 111.31 7.2299e-05 48570000.0 38043.0 38558.0 35277.0 32670.0 49207.0 39007.0 38522.0 36360.0 54688.0 53302.0 50638.0 True False 44463.72833794896 40520.437505466245 40279.809056273494 40674.151466612006 41968.71548411874 43134.69484924898 45520.9487631554 41514.14134782993 42301.255318790674 41261.041180153254 38063.187062297555 1.1681556845246752 1.0645571386113029 1.0582353230261046 1.0685955277481394 1.1026064479421824 1.133239178806834 1.1959310892346406 1.0906638290662376 1.1113429689835674 1.0840143551989436 1.0 15.216108744274123 -10.56877337249242 0.8107899399102678 0.9982865303575654 1.1087545900288813 0.16340709913102924 0.04726289479872027 0.46380785135632685 0.5330124494436275 0.031206005502155854 0.008157298545723812 2.6991475588093262e-11 10.56877337249242 0.1104680596713159 SLT(ph)PPPSSTESK ddPTM_A549_PD325901_60min_R1 2 SLTPPPSSTESK 12 0 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 S(0.094)LT(0.906)PPPSSTESK;S(0.002)LT(0.998)PPPSSTESK 143.31 1.0018e-11 69395000.0 24567.0 24194.0 22610.0 23538.0 27720.0 26292.0 23950.0 26781.0 27220.0 27066.0 28857.0 True False 27061.02375473048 26232.913288850392 24144.450564975075 24991.88880132343 25773.042828808513 26077.886669084804 24861.430355942877 26246.831945711918 26076.03806009982 25357.048140887542 25307.771939594702 1.0692772093616336 1.0365556221805634 0.9540330386493021 0.9875183347224231 1.0183845061637322 1.0304299695496006 0.9823634579639343 1.037105597772834 1.0303569244396085 1.0019470778150859 1.0 14.627292879760216 SLT(ph)PSTTVSSILR ddPTM_A549_MK2206_60min_R1 1 SLTPSTTVSSILR 13 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 SLT(0.308)PS(0.308)T(0.308)T(0.054)VS(0.01)S(0.01)ILR 56.951 0.015462 2365100.0 596.92 610.33 612.69 664.59 570.7 614.06 503.72 572.0 712.05 696.75 825.32 True False 697.6655027071599 641.3931900697964 699.578654950484 827.4145798345792 486.7507860017183 679.0394216199611 595.2394037427085 653.0827516765323 550.7718119101975 539.3536910861093 620.3702663267786 1.1245953273003355 1.0338877036571963 1.1276792150157346 1.3337431284927836 0.78461333887547 1.0945711915572025 0.9594905430705596 1.0527305822431574 0.8878114277967017 0.8694060956203307 1.0 9.276985730999016 -6.76460402111738 24.999987120826738 0.956954143998554 1.1443773442981975 0.46806926308688124 0.10481817639885269 57.77143112856987 456387.8167307896 0.014287888805357155 0.027836251017338238 1.7194754474961406e-07 6.76460402111738 0.18742320029964343 SLT(ph)PSTTVSSILR ddPTM_A549_PD325901_60min_R1 2 SLTPSTTVSSILR 13 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 SLT(0.458)PS(0.458)T(0.069)T(0.011)VS(0.002)S(0.002)ILR;S(0.018)LT(0.769)PS(0.09)T(0.018)T(0.029)VS(0.037)S(0.037)ILR 91.85799999999999 0.00019127 6424600.0 1921.55 2182.2 1854.71 1831.9099999999999 1822.6000000000001 2333.6400000000003 1904.06 1965.65 2084.58 1590.22 2375.5 True False 2116.624341429654 2366.101652431565 1980.5817738772641 1945.0629201305278 1694.5868636286575 2314.635609555876 1976.5200452416102 1926.443568727405 1996.9723519222216 1489.8132378113564 2083.3285595351995 1.0159820119308896 1.1357313956083113 0.95068142987448 0.9336323410093704 0.8134035583934623 1.1110276384212205 0.9487317956619292 0.9246950318567148 0.9585489253638205 0.7151119927735935 1.0 11.024674667887119 -5.776129353396185 24.98092466100921 0.9671981006873832 1.0758567126556424 0.15542492550656817 0.10433984006532271 195.34097942678534 332187.2943226813 0.009360591671477948 0.029287622096644948 1.6744440732648552e-06 5.776129353396185 0.10865861196825921 SLT(ph)VSDDAESSEPER ddPTM_A549_PD325901_60min_R1 1 SLTVSDDAESSEPER 15 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.1)LT(0.447)VS(0.447)DDAES(0.005)S(0.001)EPER 134.97 1.5707000000000002e-09 17334000.0 1992.6 1868.7 1977.7 2368.8 2292.0 2350.4 2028.3 2205.3 1982.1 2105.7 2833.7 True False 2194.8872851254096 2026.1819072032204 2111.9186148762137 2515.1153960648708 2131.0178269707485 2331.2591216726355 2105.4880664283464 2161.313561475617 1898.7992299384207 1972.7457426389897 2485.1728643043125 0.8831930030508505 0.8153082372281657 0.8498075305789299 1.0120484704265995 0.8574927956036956 0.9380671884670836 0.8472199647237605 0.869683390044839 0.7640511681146018 0.7938062462271536 1.0 11.279130491299062 -11.11140644975896 1.476762623593251 0.9995460669159475 0.8588785569498992 0.0 0.08597119624541749 0.35736272649977613 1.4013468735272814 0.048656998585625215 0.01070735971581058 7.737373295644561e-12 11.11140644975896 -0.14066750996604827 SLTALSEPRT(ph)PGPPGLTTTPAPPDK ddPTM_A549_MK2206_60min_R1 2 SLTALSEPRTPGPPGLTTTPAPPDK 25 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 SLT(0.003)ALS(0.11)EPRT(0.885)PGPPGLT(0.001)T(0.001)TPAPPDK;SLTALS(0.004)EPRT(0.996)PGPPGLTTTPAPPDK 100.68 4.1589e-12 19475700.0 2610.3 2153.2 2287.17 1977.29 2413.7 2267.2 1860.67 1358.1599999999999 2669.6000000000004 3088.8999999999996 3247.3 True False 3050.854824292197 2262.788682939206 2611.5250979175403 2461.726138763921 2058.6479274090557 2507.1135991544406 2198.729654097406 1550.6833391905573 2064.939862475196 2391.115344665782 2440.905789079326 1.249886348724231 0.9270282749391556 1.0698999976162822 1.008529763736784 0.8433950776058209 1.02712427918002 0.9007843170082918 0.6352901230880575 0.8459727826095498 0.9796016525355842 1.0 11.253200897580824 -6.573408928072993 4.79543669780349 0.9041689466842421 1.0634403119226636 0.3240483173293669 0.12172162885180378 0.21944162346614607 10.897144594489601 0.01809932393038653 0.03903896449003029 2.6704907126201177e-07 6.573408928072993 0.15927136523842156 SLTDPSQESHTEAIS(ph)DAETSSSDISFSGIATR ddPTM_A549_MK2206_60min_R1 1 SLTDPSQESHTEAISDAETSSSDISFSGIATR 32 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 SLTDPSQESHTEAIS(0.986)DAET(0.01)S(0.002)SS(0.001)DISFSGIATR 171.41 6.817899999999999e-63 17168000.0 743.45 728.96 747.07 903.45 840.98 711.08 871.47 1024.8 1417.8 1820.9 1727.5 True False 868.9261843926122 766.0609503600983 853.0157596073999 1124.795290557412 717.2729560394695 786.3260136232974 1029.804818509605 1170.0685383183754 1096.670563761362 1409.5574253300265 1298.5140734254715 0.669169631793355 0.5899519812975417 0.656916838303608 0.8662172506072341 0.5523798091362292 0.6055583298754511 0.7930640411104569 0.9010826777038639 0.8445580885144759 1.0855157092072352 1.0 10.342645934836366 -8.639621919269683 0.4369002830618853 0.9878774522546266 0.6340126021546612 0.6861412874829123 0.09464459945244968 0.4120731834390767 0.19667736435392083 0.042790553144877404 0.044598693642741154 2.2928628658602977e-09 8.639621919269683 -0.3538648500999655 SLTEISTDFDRS(ph)SPPLQPPPVNSLTTENR ddPTM_A549_MK2206_60min_R1 1 SLTEISTDFDRSSPPLQPPPVNSLTTENR 29 1 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 SLTEIS(0.005)T(0.022)DFDRS(0.486)S(0.486)PPLQPPPVNSLTTENR 61.228 0.00026691 5932800.0 328.3 539.75 497.1 568.51 668.16 770.55 430.78 495.47 635.99 848.89 958.83 True False 383.70901383562364 567.2209695413503 567.5962548366801 707.7949755213833 569.8745491061999 852.0890895503057 509.0471498933612 565.7043898132372 491.93928046733583 657.1251594202905 720.7260486382315 0.5323923209943899 0.7870132772543468 0.7875339817523164 0.9820582686843625 0.7906950916828156 1.1822648718750721 0.7062976991815062 0.7849090384371449 0.6825607058282762 0.9117544185642921 1.0 9.49330717826216 -11.060620222079342 1.3923936890755941 0.9992241316525414 0.7994168103598567 0.11153165570408974 0.1596610486245352 0.6056222717192967 2.108061743176117 0.11144609560680128 0.02514622548183741 8.697206423070677e-12 11.060620222079342 -0.19980732129268475 SLTFT(ph)GGAK ddPTM_A549_PD325901_60min_R1 1 SLTFTGGAK 9 0 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 S(0.081)LT(0.015)FT(0.905)GGAK 117.7 0.00018580000000000002 33635000.0 18167.0 17274.0 18355.0 20492.0 21732.0 19864.0 20520.0 20573.0 20711.0 21579.0 21269.0 True False 20011.30046616146 18729.740603108283 19600.6806775815 21757.74429929135 20205.619291329967 19702.234169888205 21300.899828974863 20162.65537579371 19840.588694442584 20216.49825730482 18653.047835299574 1.0728166593928683 1.0041115408316046 1.0508031100680821 1.166444459447338 1.0832341968850936 1.0562474478086696 1.1419527798917888 1.0809308780968927 1.0636647088255289 1.0838174241448373 1.0 14.187123760036307 -10.047514572793654 0.7792060455783602 1.0040705279408328 1.0813612348711552 0.0 0.047529984427543144 0.5296926792897759 0.6435623000072348 0.020685555998924656 0.008867234071882819 8.963661077932344e-11 10.047514572793654 0.07729070693032236 SLTIAEFK ddPTM_A549_PD325901_60min_R1 1 SLTIAEFK 8 0 A0A494C0X0;Q99426;K7EK42;K7EL99 A0A494C0X0 TBCB Tubulin-folding cofactor B 0 88.948 0.007403 2466700.0 1999.7 2220.4 2315.7 2596.4 2454.3 2452.0 2402.6 2464.3 2870.9 2547.5 1997.2 False True 2202.708071898665 2407.520900494477 2472.85732743533 2756.773731147767 2281.918434875353 2432.031724958009 2494.032257753166 2415.147603294049 2750.2460568236784 2386.6504152409293 1751.557061293916 1.2575714035096712 1.3745032655207847 1.4118051772795643 1.5738988994804852 1.3027942310881078 1.3884970000128973 1.4238943811004172 1.3788575072227012 1.5701721157699582 1.3625878756572483 1.0 10.774422272919004 -10.9125569628614 1.1292795226743448 0.9966596712450875 1.42189966815456 0.12828883589177886 0.1381366763346074 0.21130022908696744 0.47244225449539395 0.07119568533909103 0.016349720314549766 1.2230466914802008e-11 10.9125569628614 0.42523999690947245 SLTLT(ph)PTR ddPTM_A549_PD325901_60min_R1 2 SLTLTPTR 8 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y802;A0A2R8Y4W8;A0A2R8YG73 Q3V6T2 CCDC88A Girdin 1 SLTLT(0.998)PT(0.002)R;SLT(0.008)LT(0.923)PT(0.069)R 117.01 0.0013488 16243900.0 2704.7 3189.5 3186.5 3081.0 3569.0 3250.1 3121.3 2947.3 3024.6000000000004 3172.1 3355.4 True False 2979.279152905096 3458.290358551223 3402.7550519811193 3271.306372541313 3318.3257523815887 3223.63226316722 3240.0827795408964 2888.513789387878 2897.4865803298285 2971.8130646460268 2942.7070716330904 1.012428040026325 1.1752071389939616 1.1563349559263878 1.1116656510176741 1.127643924999998 1.0954648847797912 1.101055151147876 0.9815838678719941 0.9846330299950086 1.0098908903619768 1.0 11.522928222680964 -8.205975666815133 4.411810135018992 0.991583269313477 1.1168839078676136 0.6709885315956137 0.039478760419407274 0.08664879235715535 3.569625938681925 0.005978045151973072 0.007705640203682553 6.223351531509855e-09 8.205975666815133 0.12530063855413665 SLTNDWEDHLAVK ddPTM_A549_MK2206_60min_R1 2 SLTNDWEDHLAVK 13 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 0 ; 130.2 4.7138e-08 16847800.0 3638.1 3881.1000000000004 2781.1 2526.83 4637.0 3951.3999999999996 3536.2999999999997 3996.6000000000004 5739.7 5586.7 5971.0 False True 4252.122336994771 4078.6314124815867 3175.501799087286 3145.903463433709 3954.9034425967548 4369.534525272959 4178.799935391368 4563.130289074176 4439.667114417471 4324.660589868337 4488.235908783498 0.9473927893748517 0.908738198119151 0.7075166866502749 0.7009220387184109 0.8811710264286666 0.9735527753168589 0.9310562145838719 1.016686819011476 0.9891786449390999 0.9635546521529665 1.0 12.13193279293664 -7.161690545768493 3.2054070392967406 0.990541182493722 0.8132268920408317 0.5250287671541793 0.07199378951711087 0.14845516677164092 2.918726343284814 0.011086596496450345 0.01997375419867155 6.891431667512618e-08 7.161690545768493 -0.17731429045289038 SLTNDWEDHLAVK ddPTM_A549_PD325901_60min_R1 2 SLTNDWEDHLAVK 13 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 0 ; 177.36 4.2068e-22 33293000.0 8516.7 7527.8 7396.5 8305.5 9081.0 10211.400000000001 7501.5 7049.1 10216.099999999999 10347.0 12884.0 False True 9381.309114336838 8162.194124816398 7898.470968767719 8818.51187184092 8443.181887749286 10128.241743978882 7786.97368747831 6908.50017058803 9786.752844444729 9693.688654169933 11299.349678405175 0.8302521278959963 0.722359636361695 0.6990199607560542 0.7804441957128272 0.7472272412177426 0.8963561649335923 0.6891523768275297 0.6114068833351759 0.8661341690441482 0.8578979259926869 1.0 13.463952121859089 -9.332628196199032 1.4750562341541604 0.9625472993854596 0.7505762573746378 0.3934287863537492 0.08277977167031556 0.18147249606443258 0.8156694158468595 0.01803722712903013 0.015405230368726758 4.6491312161956897e-10 9.332628196199032 -0.21197104201082173 SLTNPT(ph)PIQQQLR ddPTM_A549_PD325901_60min_R1 2 SLTNPTPIQQQLR 13 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 SLTNPT(1)PIQQQLR;SLTNPT(1)PIQQQLR 164.92 2.7445e-41 12900000.0 3920.6 3436.1 3525.7 3938.9 4412.7 3574.0 3551.1 3691.1 3478.9 3873.9 4618.6 True False 4318.616425806823 3725.6722059940003 3764.9752037564185 4182.196907109049 4102.767174988576 3544.8945289559238 3686.239053736483 3617.478114888067 3332.6939312006334 3629.301292876092 4050.5414797176486 1.0661824961999553 0.9197960876711491 0.9294992342650603 1.0325031673050729 1.0128935095548182 0.8751655912441187 0.9100608084609567 0.8930850685030464 0.822777386156516 0.8960039814551115 1.0 11.983899066211448 -7.257741868008378 24.885169005935378 0.9093348589423784 0.9869123325035418 0.399210294255098 0.05572689854245716 385.96116293309376 2597611.928369107 0.010929463383954714 0.018464385475578937 5.524056755693075e-08 7.257741868008378 0.0775774735611634 SLTNS(ph)HLEK ddPTM_A549_MK2206_60min_R1 2 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.03)LT(0.025)NS(0.945)HLEK;S(0.007)LT(0.03)NS(0.963)HLEK 57.802 0.003911199999999999 313020000.0 3471.3999999999996 3582.3 3166.3 3349.8999999999996 4783.9 3118.7 3086.0 3310.3999999999996 5419.5 5013.0 4785.3 True False 4057.287452418473 3764.6237687595726 3615.3289512962756 4170.6256503827235 4080.194647194012 3448.718763974485 3646.6862541689793 3779.6593376748124 4191.99190316314 3880.5598183202937 3596.977942438731 1.1279711795140046 1.0466074101658736 1.0051017852072517 1.1594804630786983 1.1343396352404826 0.9587822942378881 1.013819465263817 1.0507874660783225 1.16542051973802 1.0788389254589912 1.0 11.812569597198536 -3.498608755996049 14.520797645930513 1.071135714884465 1.072334165279808 0.0 0.06763785005796633 0.0 0.0 0.01019979152482058 0.0 0.0003172424126111925 3.498608755996049 0.0011984503953430536 SLTNS(ph)HLEK ddPTM_A549_PD325901_60min_R1 2 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.006)LT(0.022)NS(0.973)HLEK;S(0.003)LT(0.024)NS(0.973)HLEK 83.617 0.00043616 517780000.0 8511.6 8197.5 8904.4 9355.400000000001 10652.2 8706.0 9158.6 9615.3 9405.5 10593.4 10502.5 True False 9375.691366091254 8888.332094128753 9508.706130507035 9933.261810345017 9904.026220095026 8635.101222465099 9507.135534778217 9423.515298443077 9010.219543507308 9924.530916119045 9210.759080832846 1.0179064813020269 0.9649945260890551 1.0323477193420685 1.0784411711533815 1.0752671015687334 0.9375015833857099 1.0321772018293385 1.0230986627424623 0.9782276861694438 1.0774932694495858 1.0 13.169104341850154 -8.75116765534969 24.49480775509975 0.9897186295089845 1.0201977590684885 0.0 0.04724973545674992 275.2274050531677 656329.897032897 0.006783326055681971 0.00764880115537443 1.7735047037095783e-09 8.75116765534969 0.030479129559504048 SLTPS(ph)TTVSSILR ddPTM_A549_MK2206_60min_R1 1 SLTPSTTVSSILR 13 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.001)LT(0.359)PS(0.435)T(0.077)T(0.077)VS(0.025)S(0.025)ILR 56.951 0.01459 2315400.0 712.45 862.62 531.56 651.47 1003.0 589.15 497.0 562.09 1195.1 1003.3 878.95 True False 832.694142269845 906.5236734520793 606.9432010078161 811.0801792455992 855.4600286660663 651.493461953881 587.298466727798 641.7679788284306 924.4117581825388 776.6538331778876 660.6824572140775 1.2603545518388592 1.3721019281708324 0.9186609911925533 1.2276399507650149 1.294812688493825 0.9860916614935652 0.8889269880182374 0.9713713022358664 1.399177090429399 1.1755327006151042 1.0 9.367813227805701 -5.7007080206836305 24.99998698707222 1.1402734893489 1.3162289856599823 0.17530164124686132 0.1624521731583663 125.72496025183804 51751.952890563836 0.026712708780183815 0.10345784231611442 1.9920121330383338e-06 5.7007080206836305 0.17595549631108232 SLTS(ph)SLENIFSR ddPTM_A549_MK2206_60min_R1 2 SLTSSLENIFSR 12 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 S(0.027)LT(0.209)S(0.69)S(0.075)LENIFSR;S(0.026)LT(0.046)S(0.464)S(0.464)LENIFSR 191.95 7.7595e-20 28681000.0 4304.700000000001 4296.6 4289.299999999999 4307.5 7462.1 6238.5 6404.9 6416.700000000001 9549.5 9064.8 9771.7 True False 5031.228120189494 4515.278587737597 4897.5872377207215 5362.837693371021 6364.4349749841 6898.653929218848 7568.587423631532 7326.286875319589 7386.553497417923 7017.055384222983 7345.117204799821 0.6849758798813629 0.6147319997544756 0.6667813598018955 0.730122820894752 0.8664851489129577 0.9392163170263339 1.0304243230707986 0.9974363473100297 1.0056413385195575 0.9553360672907358 1.0 12.842569796469427 -6.883566824086945 1.3323999701940166 1.0042084300735248 0.6445711971177637 0.9711853564129609 0.02554212515701779 0.03402911146307602 0.12022721915338523 0.0030056362273947032 0.007570621644566365 1.3074743447879648e-07 6.883566824086945 -0.3596372329557611 SLTS(ph)SLENIFSR ddPTM_A549_PD325901_60min_R1 1 SLTSSLENIFSR 12 0 A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47 A0A3B3IRT3 TBC1D4 TBC1 domain family member 4 1 S(0.002)LT(0.037)S(0.481)S(0.481)LENIFSR 220.37 1.4537e-32 23022000.0 3315.6 3552.6 3038.2 3866.6 3853.1 3911.6 3528.7 3530.8 3517.2 3515.1 3835.6 True False 3652.1972711842845 3851.9900698507827 3244.390522180774 4105.431100314262 3582.47154847338 3879.745226486849 3662.9866094787326 3460.375424140984 3369.38431539247 3293.1559861092796 3363.845515871695 1.0857208673680327 1.145115033278391 0.9644885613422809 1.2204576818238322 1.0649928873279517 1.1533660532806795 1.0889283090426105 1.0286962964897852 1.0016465677435664 0.9789855005442789 1.0 11.715895736211316 -8.331515883727128 2.6951134502053815 1.0010579847481724 1.1055334773517875 0.40416892016641903 0.05998390154594962 0.1948604992626287 2.78221569382958 0.009079489363670513 0.011302115603727248 4.661053805228753e-09 8.331515883727128 0.1044754926036151 SLTVSDDAESS(ph)EPER ddPTM_A549_MK2206_60min_R1 2 SLTVSDDAESSEPER 15 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 SLTVSDDAES(0.053)S(0.947)EPER;SLTVSDDAES(0.012)S(0.988)EPER 242.07 1.0743e-114 8039400.0 1813.8 1765.8 2006.4 2186.5 2072.3 1686.6 1488.2 1733.2 2367.2 2797.0 2620.5 True False 2119.9250968475626 1855.6716776583926 2290.93769001069 2722.192598155714 1767.4674151592117 1865.0748925255293 1758.586676427179 1978.8864077023873 1831.0329796416265 2165.1557573991354 1969.7575278792763 1.0762365757423773 0.942081272133168 1.1630556845629674 1.3819937528486266 0.8973020232912329 0.9468550652188888 0.8927934791651982 1.004634519576092 0.9295727792511567 1.0991991281943383 1.0 10.943802333198661 SLVEPKEDEKGDDVDDPENQNSALADTDASGGLT(ph)KESPDTNGPK ddPTM_A549_MK2206_60min_R1 1 SLVEPKEDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPK 44 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SLVEPKEDEKGDDVDDPENQNSALADTDAS(0.009)GGLT(0.493)KES(0.493)PDT(0.005)NGPK 177.18 5.228099999999999e-67 9747800.0 465.51 436.55 825.93 808.32 954.21 1020.9 624.56 377.41 1052.9 915.33 1289.0 True False 544.076707373199 458.7685303441902 943.0592934163325 1006.3584362868638 813.8469730343439 1128.9309603814254 738.0344675644128 430.90902326965085 814.4198311358008 708.5563172757064 968.9057254098026 0.5615373024481609 0.47349140201452744 0.9733241002549157 1.0386546491519806 0.8399650778099428 1.1651607899250873 0.7617195855172165 0.4447378232669604 0.8405563201634902 0.7312954178034398 1.0 9.920212487922397 -5.758855788910544 24.999536804040044 0.9008489696870253 0.5175142248363571 0.3362213604313302 0.183723030703356 48.830604783053 472468.4607735108 0.02531140636004177 0.0897851906411147 1.7423853508681379e-06 5.758855788910544 -0.3833347448506682 SLVEPKEDEKGDDVDDPENQNSALADTDASGGLTKES(ph)PDTNGPK ddPTM_A549_MK2206_60min_R1 1 SLVEPKEDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPK 44 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SLVEPKEDEKGDDVDDPENQNSALADTDAS(0.003)GGLT(0.174)KES(0.794)PDT(0.029)NGPK 182.9 4.1191e-82 11858000.0 713.96 763.95 944.1 687.27 864.94 880.51 919.04 675.81 1190.8 1076.3 1511.2 True False 834.4589933538891 802.8317919057249 1077.9875763253062 855.6511808527231 737.7084717790896 973.6849837647652 1086.0176717535512 771.6081370813237 921.0857013168508 833.1630824771862 1135.9273330017788 0.7346059638769009 0.7067633365104242 0.9489934303074105 0.7532622519009173 0.6494328029149857 0.8571718942546481 0.9560626284814036 0.6792759665728683 0.8108667469800275 0.7334651242835104 1.0 10.149654831061753 -10.798296116523085 0.4373448463440835 1.0651219682539996 0.7795281110027452 0.0 0.1251041531033523 1.6450717094620626 0.3875489099633784 0.2113852582782158 0.026654727590168143 1.5911234758374154e-11 10.798296116523085 -0.2855938572512544 SLVEPKEDEKGDDVDDPENQNSALADTDASGGLTKES(ph)PDTNGPK ddPTM_A549_PD325901_60min_R1 1 SLVEPKEDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPK 44 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SLVEPKEDEKGDDVDDPENQNSALADTDAS(0.001)GGLT(0.25)KES(0.747)PDT(0.003)NGPK 328.29 7.866599999999997e-278 41104000.0 2070.8 1120.4 1808.3 1738.7 2016.7 1965.1 1725.9 2059.6 1846.7 2169.7 2168.7 True False 2281.0260915576123 1214.8200400441417 1931.0221121912607 1846.0955501257972 1875.0539492373064 1949.0968771268276 1791.5800689487187 2018.5196622750561 1769.0896210722378 2032.7047717166804 1901.96364852199 1.1993005719800116 0.6387188530065622 1.0152781383029332 0.9706260955935684 0.985851622713402 1.0247813509167036 0.9419633599942616 1.0612819355636167 0.9301385031448901 1.0687400746572042 1.0 10.893273957465073 SLVESVSS(ph)SPNKESNEEEQVWHFLGK ddPTM_A549_MK2206_60min_R1 2 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-4;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2 Q9H2U2-4 PPA2 Inorganic pyrophosphatase 2, mitochondrial 1 S(0.001)LVES(0.014)VS(0.106)S(0.8)S(0.08)PNKESNEEEQVWHFLGK;SLVES(0.002)VS(0.149)S(0.49)S(0.359)PNKESNEEEQVWHFLGK 282.62 1.1597999999999997e-153 240230000.0 52572.0 56816.0 47603.0 50627.0 83506.0 64370.0 50826.0 60529.0 97149.0 88746.0 91560.0 True False 61444.86833800311 59707.6917192429 54353.82120094643 63030.61727273243 71222.37801972935 71181.59067465218 60060.42629759965 69109.17111228827 75144.90661507449 68698.21696322616 68823.12507255358 0.8927939304300366 0.8675527543438175 0.7897610162811765 0.915834862283358 1.0348611450678311 1.0342685049481886 0.8726779877299053 1.004156248926987 1.0918554851418978 0.9981850851847291 1.0 16.070605782003796 -6.6170666189736576 3.723065356674734 1.026958794618173 0.8513891350748433 0.5716658013292477 0.05747294133551855 0.11940710832652064 3.1952686164965836 0.00933456086441691 0.020447757456969896 2.415090341180233e-07 6.6170666189736576 -0.17556965954332981 SLVESVSS(ph)SPNKESNEEEQVWHFLGK ddPTM_A549_PD325901_60min_R1 2 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-4;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2 Q9H2U2-4 PPA2 Inorganic pyrophosphatase 2, mitochondrial 1 SLVESVS(0.011)S(0.788)S(0.2)PNKESNEEEQVWHFLGK;SLVES(0.002)VS(0.127)S(0.803)S(0.067)PNKESNEEEQVWHFLGK 285.75 5.3455999999999976e-154 170043000.0 36262.0 33745.0 34983.0 37603.0 40683.0 45063.0 38968.0 41981.0 43296.0 46729.0 47468.0 True False 39943.29154532652 36588.80957808781 37357.15674986833 39925.65190739081 37825.56642873077 44696.02186859002 40450.94856410782 41143.65602154259 41476.41968589569 43778.52296517899 41629.73692444404 0.9594894058019551 0.8789104203203284 0.8973671108628374 0.9590656789365242 0.9086189157856641 1.073656121097069 0.971683982474459 0.9883237094727824 0.9963171220892745 1.0516166134951777 1.0 15.345326821068676 -7.22484422287704 24.997592534703248 0.999889743770537 0.9192054181026506 0.6073525207179074 0.03628620886467231 289.0766488114933 197464.02907062296 0.004425327603578597 0.007664731468332298 5.958758399547175e-08 7.22484422287704 -0.08068432566788641 SLVESVSSS(ph)PNKESNEEEQVWHFLGK ddPTM_A549_PD325901_60min_R1 2 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-4;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2 Q9H2U2-4 PPA2 Inorganic pyrophosphatase 2, mitochondrial 1 SLVES(0.005)VS(0.047)S(0.436)S(0.511)PNKES(0.001)NEEEQVWHFLGK;S(0.004)LVES(0.018)VS(0.144)S(0.391)S(0.439)PNKES(0.004)NEEEQVWHFLGK 285.35 6.141499999999998e-154 168126000.0 39144.7 41014.0 41095.0 46260.5 45599.5 52235.8 45082.5 44027.7 50215.3 50097.8 53412.4 True False 43118.64112719492 44470.39371864549 43883.953824310076 49117.90601978171 42396.748429734995 51810.4089635243 46798.1392075906 43149.53298443751 48104.9255694096 46934.61635825597 46843.01340910033 0.9204924702563677 0.949349550385802 0.9368302897393149 1.0485641816168776 0.9050815766156166 1.1060434671664172 0.9990420300009775 0.921151946558048 1.02693917552418 1.0019555306648535 1.0 15.515546266885742 -6.234722325022033 22.867123705260703 1.0063548871914856 0.9369365882784918 0.23245203106757872 0.05239421836052076 258.7787396763891 221486.91268834396 0.006726671198772533 0.017788197427701293 5.824755162650648e-07 6.234722325022033 -0.06941829891299378 SLVHEVGKPPQDVTDDS(ph)PPSK ddPTM_A549_MK2206_60min_R1 2 SLVHEVGKPPQDVTDDSPPSK 21 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SLVHEVGKPPQDVT(0.016)DDS(0.98)PPS(0.004)K;SLVHEVGKPPQDVT(0.215)DDS(0.784)PPS(0.001)K 92.675 8.7119e-07 11443000.0 2411.8999999999996 2753.8 2762.3999999999996 3084.0 4168.5 2744.3 2408.51 2692.3 5096.6 4094.7 4582.4 True False 2818.969754706492 2893.9566575691924 3154.1498578974947 3839.580138446023 3555.3191719785614 3034.7000044810916 2846.1050907415856 3073.9417698229504 3942.2282375977998 3169.7044261073415 3444.4636121938547 0.8184060196562878 0.8401762896621131 0.9157158306830093 1.114710611211976 1.0321836930987638 0.8810370339630977 0.8262839766011749 0.892429741147734 1.1445115064191105 0.9202316479367558 1.0 11.75006362193764 -8.749427293637348 24.999051376765376 1.0682415464087256 0.919097887434307 0.14045945800178516 0.10026640064176716 203.05799721454966 422595.5923247399 0.017695855169745582 0.01998930693297741 1.7806259831043114e-09 8.749427293637348 -0.1491436589744186 SLVHEVGKPPQDVTDDS(ph)PPSK ddPTM_A549_PD325901_60min_R1 1 SLVHEVGKPPQDVTDDSPPSK 21 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SLVHEVGKPPQDVTDDS(0.996)PPS(0.004)K 134.76 4.4143000000000005e-18 8136900.0 1742.1 1936.7 1472.6 1908.0 2411.9 2158.6 1792.0 2076.0 1986.8 1844.7 1881.9 True False 1918.9567095337632 2099.912505849242 1572.5394914631697 2025.8528266175997 2242.496464603293 2141.02107728155 1860.1955406200257 2034.5925514095068 1903.3017052831115 1728.2253271815287 1650.438230346997 1.1626952613248127 1.2723363208859655 0.9528011788314856 1.227463584742383 1.3587278962459677 1.297243991270979 1.1270918877278602 1.2327589812202442 1.1532098992174649 1.047131177286276 1.0 10.688633429620804 -9.99917493194834 0.6747078263456777 1.0048183943782982 1.2055574999734928 0.3097509804338411 0.10105285123450523 0.5841759308411207 0.5316782486139388 0.05674270168519014 0.02268392972166722 1.0019015951396613e-10 9.99917493194834 0.2007391055951946 SLVNNPKT(ph)PPDGK ddPTM_A549_MK2206_60min_R1 2 SLVNNPKTPPDGK 13 1 Q9HCM1 Q9HCM1 KIAA1551 Uncharacterized protein KIAA1551 1 SLVNNPKT(1)PPDGK;S(0.001)LVNNPKT(0.999)PPDGK 75.018 0.00043647 22949000.0 7545.6 8275.8 9051.6 8226.2 11482.5 9298.7 8007.5 7916.6 12090.1 11792.8 11371.3 True False 8819.112807791907 8697.002871200202 10335.252987889138 10241.619369288146 9793.43946077577 10282.6822620225 9462.359099241121 9038.802293570698 9351.711653922443 9128.798289544691 8547.49237808571 1.0317777913909096 1.0174917375179897 1.2091561513862168 1.198201638125573 1.1457675570304633 1.2030057246246297 1.1070333474061902 1.0574800062699818 1.0940883290985566 1.068008941774473 1.0 13.061285515850695 -9.837151666736228 0.5441928072562094 1.0007066655773513 1.1309067225891305 0.20346694655539654 0.06511208104934244 0.7707700398689291 0.4694988228392355 0.04442838758450551 0.01771838734771625 1.454950885803316e-10 9.837151666736228 0.13020005701177917 SLVNNPKT(ph)PPDGK ddPTM_A549_PD325901_60min_R1 2 SLVNNPKTPPDGK 13 1 Q9HCM1 Q9HCM1 KIAA1551 Uncharacterized protein KIAA1551 1 S(0.008)LVNNPKT(0.992)PPDGK;SLVNNPKT(1)PPDGK 75.018 0.00043647 13430500.0 5254.7 4752.9 5398.3 5316.5 5776.6 5438.5 5904.8 6070.3 6707.6 5557.1 6375.8 True False 5788.153275694313 5153.443563304 5764.6611006149915 5644.88813035245 5370.87154418814 5394.210659128931 6129.510395230539 5949.223104441775 6425.702898307326 5206.22375761938 5591.617019526211 1.0351483757706916 0.9216374342713232 1.0309470552944706 1.0095269598472523 0.9605220682018786 0.9646960155339811 1.0961963907445693 1.0639539660292872 1.14916720438264 0.9310765990301163 1.0 12.44904983583474 -7.760810040682417 24.999984622295553 1.073395790965304 0.9859121428606675 0.14106087060861594 0.061958969598069964 15.061974314007665 598311.3556863462 0.00920970736673038 0.013210393297546794 1.7345625251529072e-08 7.760810040682417 -0.08748364810463649 SLVSVTK ddPTM_A549_MK2206_60min_R1 2 SLVSVTK 7 0 P08238;Q58FF7;Q58FF8 P08238 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 0 ; 116.9 0.019591 21922400.0 11072.5 12607.9 12229.4 10562.900000000001 16027.900000000001 12601.9 11717.3 11398.8 17611.0 15079.1 17261.3 False True 12941.267303365648 13249.588257305035 13963.712812109618 13150.810974186596 13670.217142030742 13935.424693535791 13846.181738812127 13014.614807360946 13622.136618988125 11672.72083711023 12974.842822355484 0.997412260059753 1.0211752418669895 1.076214409938772 1.013562256918282 1.0535940457388153 1.074034181710875 1.0671560286615063 1.003065315360656 1.0498883728685608 0.899642561912063 1.0 13.66342944138642 -2.001639377104795 13.548047328441246 1.0312563740969274 0.0006714759601469389 0.0 0.04921206549986927 0.0 0.0 0.004110915746886529 0.0 0.009962323103379895 2.001639377104795 -1.0305848981367804 SLVSVTK ddPTM_A549_PD325901_60min_R1 2 SLVSVTK 7 0 P08238;Q58FF7;Q58FF8 P08238 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 0 ; 113.5 0.020848 39573000.0 17360.9 18229.3 16817.5 16342.300000000001 20178.3 18951.9 17199.0 17227.3 19626.7 18730.7 18850.6 False True 19123.3657875809 19765.547086733906 17958.836681842917 17351.726754943822 18761.045819355957 18797.562009882422 17853.517356653916 16883.6879869446 18801.858052687756 17548.040405398744 16532.095703798866 1.156741778550592 1.1955862971560245 1.0863012774427747 1.0495781699930888 1.134825623774057 1.1370344296738484 1.0799306800862158 1.0212672542819203 1.1372942904248569 1.061452868396257 1.0 14.012982000116397 -14.999999999999998 0.24087795405160464 0.3345871372594825 1.1265930555590657 0.28210704568840805 0.049142410680133024 32.18269109576741 0.40932787849446256 10.238732687788666 0.02733786904236525 1.000000000000004e-15 14.999999999999998 0.7920059182995832 SLYAS(ph)SPGGVYATR ddPTM_A549_MK2206_60min_R1 1 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SLY(0.001)AS(0.497)S(0.497)PGGVYAT(0.004)R 99.66799999999999 3.4071999999999995e-05 5706100.0 3297.0 3200.7 3518.4 2868.3 4224.1 3439.5 3285.7 3664.4 5147.0 4858.3 4886.9 True False 3853.4529960891014 3363.6019587049573 4017.3620257842967 3571.03362876288 3602.740485631435 3803.4656070446795 3882.669159210313 4183.839921754346 3981.212718070058 3760.8066557641127 3673.347858421382 1.0490302428763496 0.9156774932147216 1.0936513993833283 0.9721468715727698 0.9807784681681929 1.035422114550081 1.0569837948532559 1.1389718815120184 1.0838104289368828 1.023809015838842 1.0 11.842879807428217 -7.452462597568807 5.04938643066573 1.050672257817781 1.0010445111522568 0.20246494236602364 0.053638285979623994 0.3418705626681811 16.47353920062006 0.008616292051985122 0.013781563553082524 3.528071698685663e-08 7.452462597568807 -0.049627746665524164 SLYASS(ph)PGGVYATR ddPTM_A549_MK2206_60min_R1 5 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SLYAS(0.091)S(0.909)PGGVYATR;SLYAS(0.006)S(0.994)PGGVYATR;SLYAS(0.273)S(0.727)PGGVYATR;SLYAS(0.075)S(0.925)PGGVYATR;SLYAS(0.044)S(0.956)PGGVYATR 267.46 1.2907999999999997e-83 2896790900.0 53167.0 58227.8 52983.8 51412.0 75493.5 59019.5 55488.700000000004 57481.7 87191.0 79273.5 83685.3 True False 62140.28979164977 61191.34630895759 60497.69955142966 64007.94230797242 64388.506155634765 65264.90431602657 65570.27853263341 65629.9070053233 67442.37771541605 61365.561292163104 62903.93041321718 0.9878602081531147 0.9727746089471739 0.9617475276031093 1.0175507617330581 1.0236006833383124 1.037533010851629 1.042387623506209 1.0433355527102857 1.0721488668893298 0.9755441494522122 1.0 15.940862543084897 -6.462473113617012 2.731842300504214 1.0358329816017464 0.9739582664776536 0.4443423445787201 0.02508768694693356 0.1722271526442963 2.5196645045010393 0.0038038094236366726 0.009600135167676065 3.4476794987039005e-07 6.462473113617012 -0.061874715124092816 SLYASS(ph)PGGVYATR ddPTM_A549_PD325901_60min_R1 4 SLYASSPGGVYATR 14 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SLYAS(0.009)S(0.991)PGGVYATR;SLYAS(0.008)S(0.992)PGGVYATR;SLY(0.001)AS(0.046)S(0.857)PGGVYAT(0.096)R;SLYAS(0.142)S(0.855)PGGVYAT(0.003)R 246.59 3.4477999999999994e-58 4568582500.0 27137.5 27176.5 26039.4 27206.9 29794.1 29805.3 29134.0 28043.8 28048.4 28195.399999999998 32129.800000000003 True False 29892.4790224284 29466.759030935045 27806.590271632558 28887.408421646942 27701.46520006506 29562.575518715727 30242.710312736515 27484.44440906451 26869.62328893842 26415.137632142927 28178.038287583273 1.0608431544221657 1.0457349347814482 0.9868178184670011 1.0251745748523684 0.9830870736048287 1.049135330749499 1.073272383410134 0.9753853028574953 0.9535661430617968 0.9374370693428586 1.0 14.782283556445812 -8.30198760308091 24.047827897379886 0.9772586504606151 1.029313295198652 0.5041032727802283 0.030476142310671937 251.7015853390477 149275.37331101584 0.005093349410087274 0.006157603157699086 4.988987283015491e-09 8.30198760308091 0.05205464473803678 SLYGDVDS(ph)PLPTGEAGGPPSTR ddPTM_A549_MK2206_60min_R1 4 SLYGDVDSPLPTGEAGGPPSTR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SLYGDVDS(0.991)PLPT(0.009)GEAGGPPSTR;SLYGDVDS(0.998)PLPT(0.002)GEAGGPPSTR;SLYGDVDS(0.992)PLPT(0.008)GEAGGPPSTR;SLYGDVDS(0.999)PLPT(0.001)GEAGGPPSTR 201.61 1.4158e-60 46668700.0 4439.09 5642.7300000000005 5112.47 4675.74 6417.8 4818.24 4022.2500000000005 4072.65 6573.599999999999 6098.44 6060.860000000001 True False 5188.2998666694475 5929.920854951486 5837.495121635246 5821.296509901947 5473.750121608254 5328.102958711138 4753.040760152686 4649.960609467535 5084.690095882136 4720.798168449477 4555.781190773665 1.1388386863655249 1.3016254746739635 1.2813379039048887 1.277782287193949 1.2014953950584046 1.169525650068878 1.0432987365105484 1.0206725070301008 1.1160962045718117 1.036221444965356 1.0 12.153482742294948 -7.482003831769107 1.8805325761053056 1.0518405199367422 1.2524512425355772 0.7790031197877567 0.04992630449922846 0.13435170916720882 0.9435974967918076 0.009061978129295753 0.015417755489251287 3.2960680405222624e-08 7.482003831769107 0.20061072259883495 SLYGDVDS(ph)PLPTGEAGGPPSTR ddPTM_A549_PD325901_60min_R1 2 SLYGDVDSPLPTGEAGGPPSTR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SLYGDVDS(0.999)PLPT(0.001)GEAGGPPSTR;SLYGDVDS(0.999)PLPT(0.001)GEAGGPPSTR 199.99 1.7860999999999998e-60 71486000.0 4119.5 4461.9 4442.7 4498.5 5579.700000000001 4057.1000000000004 5079.9 6817.5 5952.2 7309.6 8127.799999999999 True False 4537.708607384385 4837.91997203941 4744.208338125376 4776.362128165239 5187.801120920018 4024.0603227272186 5273.21837432794 6681.519614274713 5702.049733333064 6848.0706085358615 7128.132126369262 0.6365915399628937 0.6787079540995575 0.6655612233357766 0.6700720530271785 0.7277925028534007 0.5645322296764002 0.7397756215573787 0.9373450850549774 0.7999360326444205 0.9607103918855037 1.0 12.79930836342583 -9.333803537248025 0.2852188542393182 1.0498709991815565 0.6180297491892811 0.7506828316175472 0.06888998053704769 0.672400774448197 0.15042459738373787 0.10740943787700336 0.059169955611408524 4.636566176679997e-10 9.333803537248025 -0.43184124999227536 SLYST(ph)SPR ddPTM_A549_PD325901_60min_R1 1 SLYSTSPR 8 0 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8;H0YGM4 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 S(0.004)LY(0.001)S(0.104)T(0.677)S(0.214)PR 52.867 0.027797000000000002 7928600.0 2988.9 2873.5 3496.8 2822.6 3354.5 3293.0 2930.8 2634.5 3377.4 3508.8 3533.6 True False 3292.3309276881146 3115.659929549127 3734.1138759666014 2996.9455914102946 3118.891492396761 3266.182899790671 3042.3331977952957 2581.952830774733 3235.4596232248764 3287.2537691844464 3098.989601335964 1.0623885043914965 1.0053792785254834 1.2049455972220229 0.9670718450033913 1.0064220580321461 1.0539509065737525 0.9817177819776344 0.8331595658345099 1.0440369408887595 1.060750177337582 1.0 11.597582198629066 SLYSTS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SLYSTSPR 8 0 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8;H0YGM4 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 SLYS(0.001)T(0.013)S(0.985)PR 86.744 0.0027348000000000003 8043000.0 2415.1 2240.9 2449.4 2288.9 2594.8 2338.9 2406.2 2899.3 2773.4 2667.6 3175.6 True False 2660.279174097347 2429.748507439233 2615.631013438741 2430.2801545309367 2412.5501995740397 2319.8527738598245 2497.7692577231614 2841.4711870431506 2656.8436427582956 2499.1672807445366 2785.021331786982 0.9552096221792329 0.8724344333406625 0.9391780894405022 0.8726253285002923 0.8662591456798825 0.8329748671516686 0.8968582140519878 1.020269092596123 0.9539760476640793 0.8973601933386162 1.0 11.443472662548913 -8.181637290720438 7.009952598190182 0.9807495655595846 0.8876725998451874 0.4100556962333126 0.043459657626213316 0.13648726342274312 10.368385918233859 0.005845481538014917 0.007556502341361249 6.582073222051831e-09 8.181637290720438 -0.09307696571439716 SLYT(ph)SMARPPLPR ddPTM_A549_MK2206_60min_R1 2 SLYTSMARPPLPR 13 1 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 S(0.021)LY(0.082)T(0.489)S(0.408)MARPPLPR;S(0.009)LY(0.052)T(0.47)S(0.47)MARPPLPR 45.257 0.014372 21738800.0 1820.45 2448.4 2442.8 2240.8 3275.3 2813.8999999999996 1585.54 2166.03 3757.2 2992.0 3692.6000000000004 True False 2127.69745427067 2573.013102038059 2789.2257721083106 2789.796100593334 2793.5077087636737 3111.665030284351 1873.6120944378126 2473.0713856886723 2906.2001990155086 2316.1051219657543 2775.6255094245416 0.7665650308538187 0.9270029740328732 1.0048998910831413 1.0051053685450997 1.0064425835828406 1.1210680330321214 0.6750233733174835 0.8909960573901065 1.0470433382124515 0.8344443852751383 1.0 11.438597215639593 -5.305047736694374 2.3442566523396624 0.9942611673163154 0.7241057943129333 0.09623929690871913 0.11969266023799621 0.5413644867132682 3.767773254436246 0.015411712481725487 0.28507198437856857 4.953957350022699e-06 5.305047736694374 -0.2701553730033821 SLYYYIQQDTK ddPTM_A549_MK2206_60min_R1 2 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ; 175.91 6.0435000000000005e-15 26875000.0 8333.5 9173.8 9121.3 8485.900000000001 11896.6 9272.8 8883.3 8474.900000000001 12607.3 11712.9 12532.2 False True 9739.991065486354 9640.707235532087 10414.83749596018 10564.94588094653 10146.625899330731 10254.041541213519 10497.2806227023 9676.243028292738 9751.766679721135 9066.947755037652 9420.108868875659 1.033957377888444 1.0234178149878175 1.1055962984006624 1.121531186954054 1.0771240588158708 1.0885268614137995 1.114348121536647 1.0271901485409956 1.0352074286467414 0.9625098691794463 1.0 13.201528017926835 -8.400420383071019 5.858514903566755 1.0173385647109983 1.0810369594646152 0.5204396997565267 0.03385147249781577 0.15861748462672 7.022114134332471 0.00536951840670048 0.006493163404525442 3.977220020797811e-09 8.400420383071019 0.06369839475361694 SLYYYIQQDTK ddPTM_A549_PD325901_60min_R1 2 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ; 190.86 1.2247e-18 55060000.0 17683.4 17147.1 19122.0 19277.8 24783.0 22501.0 21259.0 21443.6 21903.0 22477.0 24111.0 False True 19478.60575016897 18592.146294752692 20419.733909927167 20468.545922939607 23042.327576708558 22317.759316182764 22068.022878371186 21015.890575821235 20982.49307973424 21057.798384051188 21145.499852221918 0.9211702672577023 0.8792483707969228 0.9656775225288189 0.9679859102876125 1.0897036124822241 1.0554377750421289 1.043627392712229 0.9938705976540411 0.9922911837683255 0.9958524759980306 1.0 14.368063043760966 -6.066465113857125 2.2031386214445785 1.0093160916407293 0.9007752853500673 0.6237062285373913 0.034756307785407184 0.1762212926052354 1.6466080459626147 0.005351495048978963 0.019944442808202196 8.580940412005198e-07 6.066465113857125 -0.10854080629066198 SMDAMS(ph)SPTKTETVK ddPTM_A549_MK2206_60min_R1 2 SMDAMSSPTKTETVK 15 1 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 S(0.305)MDAMS(0.336)S(0.336)PT(0.021)KT(0.002)ET(0.001)VK;S(0.015)MDAMS(0.486)S(0.486)PT(0.013)KTETVK 54.805 0.0032342 75438000.0 12692.3 13983.4 14000.0 12131.6 17002.0 13095.7 12138.7 11088.0 17926.7 19137.6 19404.0 True False 14834.449943057843 14695.09533206951 15985.41051642228 15103.842544608222 14501.028322413204 14481.478281777885 14344.144664122161 12659.757955575862 13866.331073057427 14814.402868359559 14585.451276843909 1.0170717149224755 1.0075173577522194 1.0959832653104788 1.0355416680584522 0.9942118380276148 0.9928714584764962 0.983455663582734 0.8679716325044184 0.9506960607432031 1.0156972579846835 1.0 13.832242403755563 -7.053312395681274 1.7691414431131474 0.967781132240864 1.040715161881951 0.3872450105446241 0.041657606931031044 0.29808298660966365 1.844024860024931 0.006646154547280849 0.01372841252691319 8.844791594927106e-08 7.053312395681274 0.07293402964108697 SMDAMS(ph)SPTKTETVK ddPTM_A549_PD325901_60min_R1 5 SMDAMSSPTKTETVK 15 1 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 S(0.015)MDAMS(0.612)S(0.366)PT(0.007)KTETVK;S(0.003)MDAMS(0.492)S(0.492)PT(0.01)KT(0.002)ET(0.001)VK;S(0.061)MDAMS(0.417)S(0.417)PT(0.052)KT(0.052)ET(0.001)VK;S(0.024)MDAMS(0.483)S(0.483)PT(0.009)KTETVK;S(0.027)MDAMS(0.475)S(0.475)PT(0.022)KT(0.001)ETVK 63.336999999999996 0.00095862 126429000.0 12781.86 11208.320000000002 12073.220000000001 12955.869999999999 13843.0 12414.689999999999 13495.190000000002 13272.37 13578.43 13012.21 14165.16 True False 14079.465017692 12152.884462002467 12892.58131136967 13756.124664984363 12870.715435757444 12313.588880717349 14008.756840301327 13007.642168377159 13007.775807362275 12190.616839922344 12422.93512034756 1.1333444859283863 0.9782619279800652 1.0378047688788838 1.1073167920239049 1.0360446473455749 0.9911980350399551 1.1276527410463848 1.0470667392500428 1.0470774966905207 0.9812992438441781 1.0 13.600718453534386 -10.286918898131471 0.7183403114408149 1.000038375047778 1.0545685290694948 0.2081222716171096 0.0480606341732067 0.9965160076275698 0.9543139347432714 0.02905153819868618 0.00927033615263236 5.165128159116478e-11 10.286918898131471 0.0545301540217169 SMDAMSS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 SMDAMSSPTK 10 0 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 S(0.003)MDAMS(0.117)S(0.864)PT(0.016)K 41.283 0.025559000000000002 2279500.0 765.42 787.23 529.74 430.92 814.14 554.33 542.66 432.84 544.74 645.01 842.86 True False 843.1248749275777 853.5726348839247 565.6913419853998 457.5369497096732 756.9576150305256 549.8157202675255 563.3112232549461 424.2066666435887 521.8464721843783 604.2839585219047 739.193563329757 1.1406009423697545 1.1547349398430067 0.765281747634811 0.6189677134750214 1.0240316644814236 0.7438047996398078 0.7620618620073817 0.5738776521980461 0.7059672839055562 0.8174908285183908 1.0 9.529808384038612 -5.756966419894012 24.96983109597081 0.8149038470330503 1.147668101033512 0.5171922494332801 0.1337443676640048 81.04034866564092 452381.39988615667 0.021813493559838262 0.0790618530787331 1.7499819938414336e-06 5.756966419894012 0.3327642540004616 SMDAMSS(ph)PTKTETVK ddPTM_A549_MK2206_60min_R1 5 SMDAMSSPTKTETVK 15 1 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 S(0.01)MDAMS(0.088)S(0.893)PT(0.009)KTETVK;SMDAMS(0.221)S(0.771)PT(0.008)KT(0.001)ETVK;SMDAMS(0.143)S(0.854)PT(0.002)KTETVK;SMDAMS(0.1)S(0.894)PT(0.005)KTETVK;SMDAMS(0.101)S(0.896)PT(0.002)KT(0.001)ETVK 155.11 5.7591e-20 154017000.0 21077.5 22730.1 22685.8 19897.9 30650.7 23223.0 21679.1 21720.1 33977.299999999996 32946.3 33170.7 True False 24634.86670460055 23886.965001893193 25902.98756381806 24772.886393250687 26142.02263273677 25680.442445820212 25617.911851184297 24798.990690016515 26281.49580059876 25503.707947800907 24933.49972525285 0.988022819742796 0.9580269623241171 1.0388829425972361 0.9935583318117396 1.048469846624055 1.029957395824817 1.0274495010116158 0.9946052885989326 1.0540636529247698 1.022869161121836 1.0 14.605797776695061 -5.761809464426058 24.999999999999904 1.0244326014317668 0.9730248834651457 0.4731386368082886 0.020441469122119645 6.463428853455051 436783.63549479324 0.0031929895565534928 0.010907634298222058 1.73057543831247e-06 5.761809464426058 -0.051407717966621136 SMDAMSS(ph)PTKTETVK ddPTM_A549_PD325901_60min_R1 7 SMDAMSSPTKTETVK 15 1 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 S(0.007)MDAMS(0.173)S(0.793)PT(0.026)KT(0.002)ETVK;SMDAMS(0.111)S(0.804)PT(0.082)KT(0.002)ETVK;S(0.012)MDAMS(0.171)S(0.79)PT(0.024)KT(0.002)ET(0.001)VK;S(0.013)MDAMS(0.211)S(0.775)PT(0.001)KTETVK;SMDAMS(0.16)S(0.836)PT(0.003)KT(0.001)ETVK;SMDAMS(0.251)S(0.735)PT(0.014)KT(0.001)ETVK;SMDAMS(0.016)S(0.982)PT(0.002)KTETVK 167.92 1.1652e-27 441837000.0 60381.2 68894.1 65181.1 78976.90000000001 81623.3 72804.8 67488.0 72574.6 81094.29999999999 79073.3 80427.3 True False 66511.05497370995 74700.0475908649 69604.68141179555 83855.12374344627 75890.36099309835 72211.9018471545 70056.29277085059 71127.04266932786 77686.18858402461 74080.59834326623 70535.2519706611 0.9429477192677357 1.0590455907343483 0.9868070144662895 1.1888399261453764 1.0759210305885727 1.0237703818962862 0.9932096478508401 1.0083899990732705 1.1013810316625496 1.050263467890918 1.0 16.106056844611516 -11.228527024911822 1.70450376094242 1.0000034849508699 1.0527971611060627 0.0 0.0650329770188824 0.8153097531961374 4.272861930866532 0.047154232744067555 0.00973149114893481 5.908441978749141e-12 11.228527024911822 0.052793676155192815 SMES(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SMESSPR 7 0 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 S(0.005)MES(0.498)S(0.498)PR 45.081 0.026344 292210000.0 410.24 275.76 338.79 382.19 345.98 364.45 274.7 240.98 425.24 531.47 554.07 True False 479.47848259496277 289.7950061338078 386.8355163470504 475.82656715716075 295.08680031693456 403.0158570976692 324.60943422560575 275.13965297029847 328.92381896874156 411.41055787805436 416.47912744593407 1.1512665365377934 0.6958211997585114 0.9288232971465492 1.1424979928170134 0.7085272247052566 0.9676736012418471 0.7794134515606559 0.6606325139451705 0.789772637552986 0.9878299553714425 1.0 8.702100384081504 -6.7735602935821495 24.995922664311486 0.8648532434753055 0.9557051605426536 0.1378025021740943 0.15504812494337136 509.43590452422956 1050566.570686681 0.02303365739919572 0.04376008245181193 1.6843785664058603e-07 6.7735602935821495 0.09085191706734819 SMES(ph)SPR ddPTM_A549_PD325901_60min_R1 1 SMESSPR 7 0 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 S(0.001)MES(0.643)S(0.356)PR 53.166000000000004 0.016168000000000002 410110000.0 718.31 760.02 755.05 754.07 983.95 970.54 895.71 934.33 712.4 801.3 932.33 True False 791.2323024081263 824.0695526904219 806.2922334844945 800.6471912827748 914.8407464432228 962.6362440215117 929.796734201319 915.6940551822946 682.4603054377334 750.7057812492862 817.6593205268167 0.9676796711597888 1.0078397347191923 0.9860980156931394 0.9791941107782137 1.1188531989750845 1.1773072474747632 1.1371444204931858 1.1198967983295467 0.8346511662070032 0.9181156043883993 1.0 9.675356056213364 -8.753851618700722 24.99996317846925 0.9219186045860879 1.0629492121505777 0.41542523904460793 0.0761052817742399 150.7038470016242 496534.80680034484 0.016004058950885573 0.017976541218585492 1.7625781469992482e-09 8.753851618700722 0.14103060756448982 SMES(ph)SPRK ddPTM_A549_MK2206_60min_R1 1 SMESSPRK 8 1 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 S(0.002)MES(0.564)S(0.434)PRK 52.57899999999999 0.0071032 36127000.0 1983.3 2105.8 2380.0 1714.7 1698.0 1684.0 1280.4 1424.2 1948.7 3322.8 3096.2 True False 2318.032552970432 2212.9762254009747 2717.5197877917894 2134.8015769758085 1448.2264493269986 1862.1997622512686 1513.0321062339488 1626.0847114295764 1507.3225614344517 2572.1771722151757 2327.3280892271746 0.9960059192772303 0.9508656023379273 1.1676565072070195 0.9172757321399848 0.6222699996749941 0.8001449262229464 0.6501155179785479 0.6986916537279206 0.6476622563065363 1.1052060876682441 1.0 11.184458890049097 -6.524742319470916 24.974943998890346 0.7900015609683202 1.0316151746698436 0.35023934405027957 0.1495909091354553 51.78061160959094 693946.012103447 0.022225150520450418 0.04651870575589855 2.987154465596757e-07 6.524742319470916 0.24161361370152346 SMESS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SMESSPR 7 0 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 SMES(0.109)S(0.891)PR;SMES(0.079)S(0.921)PR 83.265 0.014588 185910000.0 3311.0 3073.6000000000004 3309.6000000000004 2792.6000000000004 4186.8 3341.4 3011.9 3609.3 3973.7 4879.6 5218.799999999999 True False 3869.815853821964 3230.0331115929516 3778.9510460822266 3476.787125364579 3570.927266220423 3694.984730158191 3559.123243334918 4120.92932801767 3073.6632946949667 3777.2949709706163 3922.8279284473806 0.9864862605262428 0.8233940337197939 0.9633231727239948 0.8862961080071283 0.9102941376359995 0.9419186356258639 0.9072850780746802 1.0504996403573317 0.7835325308065435 0.9629010091364458 1.0 11.937678338858607 -4.958457445600221 13.468728417926386 0.9094251503865165 1.265940147893766 0.030429482777416528 0.0730609334107068 1272396.916336141 13693361.534434304 0.011640708939664806 10661683.150367208 1.1003796608538353e-05 4.958457445600221 0.35651499750724946 SMESS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SMESSPR 7 0 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 S(0.001)MES(0.101)S(0.898)PR;SMES(0.141)S(0.859)PR 69.825 0.021726 306920000.0 3456.3 3812.6000000000004 4103.9 3617.6 4207.0 3735.8 4116.5 3496.5 3445.6000000000004 3875.9 4082.2 True False 3807.1810316064184 4133.901182320864 4382.415332755471 3841.0509358342924 3911.514833362102 3705.3768834005414 4273.155660135231 3426.7595645488145 3300.7934143967645 3631.1750125347667 3580.1152791978907 1.063424145509471 1.1546838187978814 1.2240989440254373 1.072884707973667 1.0925667271357977 1.0349881482673136 1.1935804651219537 0.9571645875371267 0.9219796450622375 1.014262036095194 1.0 11.805790327472698 -8.278337516313625 24.75534482509698 0.9616781777098344 1.1187655072078708 0.5945353719410691 0.05774965284745442 349.2460843367588 511635.39885396074 0.009624535928938681 0.01165045327376573 5.2682027862294526e-09 8.278337516313625 0.1570873294980364 SMESS(ph)PRK ddPTM_A549_MK2206_60min_R1 2 SMESSPRK 8 1 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 S(0.002)MES(0.112)S(0.886)PRK;S(0.001)MES(0.111)S(0.888)PRK 63.076 0.004208600000000001 64551000.0 4074.2 4669.2 4885.700000000001 3740.7 4472.2 3365.3999999999996 3027.0 3328.3 4012.4 6090.5 6436.2 True False 4761.825355373431 4906.842336234321 5578.565725720313 4657.171667926405 3814.3453042875185 3721.5243942282773 3576.9667178773525 3800.0967174912657 3103.5978064861674 4714.651819964045 4837.913909916657 0.9842724455292061 1.014247551238226 1.1530932194319297 0.9626404592235983 0.7884276932809721 0.7692415498754479 0.7393613827119493 0.7854825009808267 0.6415157161280767 0.9745216446080299 1.0 12.240169381627428 -6.613382279242931 4.105253201441826 0.8096158560916792 1.0488462049326035 0.5123465390889095 0.10277782075646598 0.17378599398257163 5.491570258972441 0.01940053193837095 0.042013364924626095 2.4356659271048285e-07 6.613382279242931 0.2392303488409243 SMESS(ph)PRK ddPTM_A549_PD325901_60min_R1 4 SMESSPRK 8 1 Q1ED39;H3BPL4 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 S(0.001)MES(0.111)S(0.887)PRK;S(0.005)MES(0.321)S(0.674)PRK;SMES(0.338)S(0.662)PRK;S(0.002)MES(0.085)S(0.913)PRK 66.962 0.0034435000000000004 66256900.0 10284.300000000001 9913.2 10638.0 10128.2 11214.599999999999 11068.9 9653.8 10397.4 10793.6 11037.9 12339.1 True False 11328.354565098485 10748.620154378425 11359.95865149071 10753.795911188874 10426.92518426969 10978.758548282101 10021.180641762063 10190.015700397496 10339.98252775508 10340.965110260202 10821.468923999479 1.0468407426624728 0.9932681255998903 1.0497612414056827 0.993746411574447 0.9635406484553328 1.014534960585045 0.9260462430878894 0.9416481045191963 0.9555063735223067 0.955597172887164 1.0 13.40160872580572 -6.486503776932747 5.242389238784875 0.9735439923667076 1.026091421590456 0.4955548048344448 0.0277627885097819 0.15726604987259046 11.112988187887085 0.004174436541909817 0.009619318886152656 3.2620921343531475e-07 6.486503776932747 0.05254742922374833 SMEVLSVT(ph)DGGSPVPAR ddPTM_A549_MK2206_60min_R1 1 SMEVLSVTDGGSPVPAR 17 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 S(0.001)MEVLS(0.145)VT(0.59)DGGS(0.265)PVPAR 51.03 0.008617 2169200.0 1072.5 1014.0 1380.3 813.88 1372.4 1074.6 870.25 1220.0 1902.5 1716.4 1637.2 True False 1253.5117798924966 1065.6082688558217 1576.0472954155487 1013.2806365364618 1170.5217780072862 1188.3134587382503 1028.3631603015415 1392.9387360933033 1471.586787668212 1328.664047908429 1230.638055578687 1.0185868819919222 0.8658990058248582 1.2806749216563424 0.823378272712348 0.9511503180818408 0.9656075995305262 0.8356341294987589 1.131883359025735 1.19579171227256 1.0796546083435123 1.0 10.265190796116467 -8.293649058944146 24.90823572390505 1.0979975275550493 0.9657501034132554 0.22358711709844048 0.12431800728091413 787.0241856032023 608615.6720655842 0.021173606352265936 0.02559874506809674 5.0857023775020574e-09 8.293649058944146 -0.1322474241417939 SMEVLSVT(ph)DGGSPVPAR ddPTM_A549_PD325901_60min_R1 1 SMEVLSVTDGGSPVPAR 17 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SMEVLS(0.02)VT(0.51)DGGS(0.469)PVPAR 68.861 0.00077024 10641000.0 4899.9 5649.6 5105.4 5319.7 6268.8 5448.1 5563.8 5576.3 5496.3 5960.1 5642.1 True False 5397.334240884267 6125.711619272929 5451.883145264207 5648.28578708472 5828.501114185959 5403.7324799118 5775.533453628182 5465.076321977276 5265.309624898109 5583.778268842968 4948.15746821871 1.09077657199686 1.2379783098289567 1.101800656159561 1.1414927320649821 1.1779134256784605 1.0920696268498287 1.16720890366234 1.104466936850466 1.0640950007586503 1.1284560575743106 1.0 12.272675697466946 -9.030760089444685 0.5950821362085229 1.006884973401945 1.153141739683035 0.16527124228029622 0.05492166562429104 0.2777366608394547 0.22164886154755425 0.013832653765186019 0.011254168584238626 9.316223750252208e-10 9.030760089444685 0.14625676628109008 SMEVLSVTDGGS(ph)PVPAR ddPTM_A549_MK2206_60min_R1 1 SMEVLSVTDGGSPVPAR 17 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SMEVLS(0.181)VT(0.119)DGGS(0.7)PVPAR 66.965 0.00073883 2217300.0 1210.2 1693.8 1016.5 1270.0 1568.4 1593.7 1003.5 1261.9 2088.2 1857.5 2147.2 True False 1414.4521734507211 1780.0071851952564 1160.654984995946 1581.1500570124674 1337.690437646917 1762.3442761875579 1185.8229604856035 1440.7781894066713 1615.2260341701763 1437.8894599102232 1613.990980294746 0.8763693172513362 1.1028606769972114 0.7191211098242867 0.9796523501783876 0.8288091160228348 1.091917053877042 0.7347147381635611 0.8926804467913182 1.0007652173342412 0.8908906415620965 1.0 10.656416800873567 -8.765724158585224 24.29052233100125 1.0003613640018794 0.9045149779603315 0.024182751773556332 0.12133984375842202 108.96187568713479 617705.5126557616 0.018210823093947004 0.019725587775586896 1.7150462704193352e-09 8.765724158585224 -0.09584638604154783 SMEVLSVTDGGS(ph)PVPAR ddPTM_A549_PD325901_60min_R1 2 SMEVLSVTDGGSPVPAR 17 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SMEVLS(0.048)VT(0.176)DGGS(0.776)PVPAR;S(0.001)MEVLS(0.105)VT(0.238)DGGS(0.656)PVPAR 81.449 0.00022911 10215900.0 7923.9 7942.0 8104.200000000001 8395.9 9906.2 8271.9 8681.1 7766.5 8451.6 8271.4 8983.400000000001 True False 8728.328494733132 8611.300212451426 8654.19974651354 8914.495674527627 9210.42268653474 8204.536388939701 9011.464010980197 7611.591064798613 8096.4086432307 7749.142392394045 7878.498750464534 1.1078669644034012 1.0930128296261625 1.098457970308527 1.1314967428283222 1.169058088127725 1.0413832189103214 1.1438047141213115 0.9661220120584288 1.0276588090787369 0.9835810904884814 1.0 12.943705034699326 -8.25761965824488 24.999723328553415 1.0099056147433156 1.111101940716532 0.7220299972919331 0.034674947151249386 137.21107268777496 898032.7230983378 0.005229074267551256 0.006617118361903614 5.525611435045074e-09 8.25761965824488 0.10119632597321626 SMEVLSVTDGGS(ph)PVPARR ddPTM_A549_MK2206_60min_R1 2 SMEVLSVTDGGSPVPARR 18 1 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SMEVLSVT(0.031)DGGS(0.969)PVPARR;SMEVLSVT(0.001)DGGS(0.999)PVPARR 93.26899999999999 1.7327000000000002e-06 7935100.0 2292.43 1977.9 1858.83 1671.9299999999998 2834.7 1976.29 1537.27 1837.42 3436.7 2980.5 3644.1 True False 2679.336139467558 2078.566661706044 2122.440045017231 2081.5529250557893 2417.719385104385 2185.41969604487 1816.5720602548126 2097.8799118627526 2658.292937282178 2307.2029799528495 2739.1693979564466 0.9781564226975057 0.7588310030247695 0.7748480421111139 0.7599212106446315 0.8826469027100409 0.7978402860645636 0.663183540824479 0.7658817718348755 0.9704740930828863 0.8423002176039697 1.0 11.419522773792153 -8.791286290465548 7.36087523397136 0.9864298556952068 0.7926785456902228 0.297145023330574 0.0872440731094056 0.09532120482639202 17.520078109924224 0.012868868438450145 0.013789971745317223 1.617013737577036e-09 8.791286290465548 -0.19375131000498402 SMEVLSVTDGGS(ph)PVPARR ddPTM_A549_PD325901_60min_R1 2 SMEVLSVTDGGSPVPARR 18 1 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 SMEVLSVT(0.001)DGGS(0.999)PVPARR;SMEVLSVT(0.002)DGGS(0.998)PVPARR 92.492 1.9259e-06 7152900.0 2602.8 3027.8999999999996 2273.2 2869.6 2780.6000000000004 3185.4 2384.6000000000004 2333.7 4162.0 2820.2 3699.8999999999996 True False 2867.034339919911 3283.0717594159723 2427.473021862067 3046.84867466555 2585.3002485492425 3159.4591585160024 2475.3472579031886 2287.152522747766 3987.0856137448723 2642.1320907016557 3244.835755598518 0.8835684009501058 1.0117836484486105 0.7481035111480746 0.9389839437662234 0.7967430228444267 0.9736884688430809 0.7628574893605377 0.7048592579151652 1.2287480519979184 0.8142575740984794 1.0 11.663929739595162 -8.765725468815925 24.999996823586287 1.1080199125087613 0.856464110013985 0.13002480084879653 0.13651665864058088 66.2669097043484 386522.1514303271 0.020300515854447 0.021984741821336966 1.7150410962737247e-09 8.765725468815925 -0.25155580249477627 SMGAS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SMGASPK 7 0 A0A2R8Y6F3;Q9P2P5 A0A2R8Y6F3 HECW2 E3 ubiquitin-protein ligase HECW2 1 SMGAS(1)PK 56.729 0.036896 4877100.0 2235.9 2892.4 2554.0 3046.0 3069.9 2501.4 2751.0 2732.4 3069.4 3311.7 2821.6 True False 2462.886922017416 3136.152698878684 2727.329798449638 3234.1445020320816 2854.280814580062 2481.0294277365274 2855.6908104049608 2677.900138473668 2940.4037921260224 3102.5986968217435 2474.561087596091 0.9952823287987544 1.2673571546076865 1.102146886621861 1.3069568248864234 1.1534493243619413 1.0026139343145979 1.1540191206914667 1.0821717644784878 1.1882526589725346 1.2537975774264514 1.0 11.272956942015163 -7.0170718459891175 24.360344995588765 1.0899443263379678 1.1778212268374881 0.029922620307221037 0.10450520973124326 777.1950146653005 1109004.8129456514 0.014343817389296059 0.025244198278066152 9.614532105764115e-08 7.0170718459891175 0.08787690049952035 SMGS(ph)PRPK ddPTM_A549_MK2206_60min_R1 2 SMGSPRPK 8 1 P35612-2;P35612-8;P35612-9;P35612-4;P35612-3;P35612 P35612-2;P35612 ADD2 Beta-adducin 1 S(0.101)MGS(0.899)PRPK;S(0.101)MGS(0.899)PRPK 54.608000000000004 0.0063013 9720000.0 3028.3999999999996 3448.3 3042.3 2541.09 3744.2 2858.3 2910.6 2366.3 3940.1 4342.9 4545.1 True False 3539.5198827286117 3623.803741119852 3473.7438867222504 3163.657164073865 3193.4331399117464 3160.7634088140157 3439.4183445833573 2701.730271489823 3047.673641046794 3361.835873724956 3416.4262316214827 1.0360299455518192 1.0607001279813804 1.0167770796776618 0.9260136029842945 0.93472913606453 0.92516659062001 1.006729872505095 0.7908059733540755 0.8920648169828407 0.9840212098270252 1.0 11.738272260758164 -6.133751452515977 3.630138524062259 0.9368638575169133 1.0470089823651298 0.41190034026451516 0.056514179563669956 0.20423123471021987 4.831467615620756 0.00873492052332508 0.0254218448890718 7.349343520261014e-07 6.133751452515977 0.11014512484821659 SMGSQEDDSGNKPSS(ph)YS ddPTM_A549_MK2206_60min_R1 1 SMGSQEDDSGNKPSSYS 17 1 H7C3P9;Q9UNS2-2;Q9UNS2 H7C3P9 COPS3 COP9 signalosome complex subunit 3 1 SMGSQEDDSGNKPS(0.076)S(0.53)Y(0.002)S(0.392) 68.919 0.0010271 5199600.0 1006.8 1027.3 1083.6 858.51 1544.6 1110.9 816.32 1052.4 1376.9 1496.8 1714.6 True False 1176.723226103277 1079.585182046928 1237.270773971085 1068.844988539978 1317.3913861192477 1228.4547006442615 964.6347773827682 1201.5809228398296 1065.0343484574835 1158.6718404272528 1288.81749944736 0.9130254877884972 0.8376555893366205 0.9600046356459483 0.8293222190095142 1.0221706228260712 0.9531641998739295 0.7484649904244782 0.9323127000952911 0.8263655241445481 0.8990193265719055 1.0 10.331832272734886 -11.02074122775474 1.3157062302029061 0.9998483503988992 0.8853322034042671 0.01675108519660462 0.07898406774827724 0.5019225639892076 1.5510124909028742 0.05079040062335211 0.011536392196129095 9.53364052132895e-12 11.02074122775474 -0.11451614699463208 SMGSQEDDSGNKPSSYS(ph) ddPTM_A549_MK2206_60min_R1 1 SMGSQEDDSGNKPSSYS 17 1 H7C3P9;Q9UNS2-2;Q9UNS2 H7C3P9 COPS3 COP9 signalosome complex subunit 3 1 SMGSQEDDSGNKPS(0.023)S(0.132)Y(0.003)S(0.842) 73.168 0.00038511 4722400.0 1211.6 1423.2 1314.6 1280.6 1308.2 1282.5 1020.3 1463.0 1352.3 1762.8 1892.5 True False 1416.0884592240084 1495.634801021307 1501.0300474920525 1594.3470574883193 1115.7655129620616 1418.2132987454004 1205.6753030228815 1670.3847302495928 1046.0062091793552 1364.5822556822286 1422.540019657138 0.9954647599758322 1.0513832864834176 1.055175971677642 1.1207748361783105 0.7843473628467652 0.9969584539964083 0.8475510610334004 1.174226880908553 0.7353088101039609 0.9592575511591734 1.0 10.47425352443384 -6.7506324814022305 24.996623822425107 0.8973758863061966 1.0553539889905776 0.18748987146118268 0.11690336942579378 238.77602222113376 552291.0031694847 0.018492929043238508 0.038195813567770215 1.7756915114950617e-07 6.7506324814022305 0.15797810268438106 SMGSQEDDSGNKPSSYS(ph) ddPTM_A549_PD325901_60min_R1 2 SMGSQEDDSGNKPSSYS 17 1 H7C3P9;Q9UNS2-2;Q9UNS2 H7C3P9 COPS3 COP9 signalosome complex subunit 3 1 SMGSQEDDSGNKPS(0.013)S(0.245)YS(0.743);SMGSQEDDSGNKPS(0.008)S(0.007)YS(0.985) 100.97 1.0923000000000001e-08 21964900.0 4790.4 4257.2 5305.799999999999 4675.5 5866.799999999999 5905.5 5247.1 5410.9 5211.4 5209.5 6656.1 True False 5276.717881493909 4615.969184644699 5665.883494367301 4964.295016169072 5454.736207361248 5857.407565962281 5446.781261823289 5302.975354731067 4992.382981131675 4880.57128094117 5837.441896494314 0.9039435381211847 0.7907520565501179 0.9706106878374168 0.8504230284759473 0.9344394863505363 1.003420277207377 0.9330767412167927 0.9084416511136115 0.8552347191892152 0.8360804899612286 1.0 12.511120569560328 SMGTGDTPGLEVPS(ph)SPLR ddPTM_A549_MK2206_60min_R1 1 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.5)S(0.5)PLR 76.82 0.0001528 17171000.0 932.5 1152.5 1200.9 1119.6 1641.4 989.68 869.55 1088.8 2110.5 1663.8 1750.0 True False 1089.8832025638724 1211.157327274491 1371.2056777979653 1393.9020502607532 1399.9522343494316 1094.4072807035843 1027.5359793624873 1243.1407343101548 1632.4751197759604 1287.9464244407154 1315.4267024570622 0.8285396674159791 0.9207334205791868 1.0424037122225924 1.0596577123279527 1.0642571203203384 0.8319789150238173 0.7811427101511403 0.9450475134708108 1.24102324875015 0.9791092289938946 1.0 10.361315146280436 -8.670874262529296 10.049581702541047 1.1137545787612293 0.9369988270438613 0.2141612553998078 0.11159724971959464 0.3243560070250897 33.43167003250209 0.021661784802669542 0.024558252005270433 2.1336625643314995e-09 8.670874262529296 -0.17675575171736801 SMGTGDTPGLEVPS(ph)SPLRK ddPTM_A549_MK2206_60min_R1 6 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDT(0.002)PGLEVPS(0.499)S(0.499)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;S(0.002)MGT(0.002)GDTPGLEVPS(0.498)S(0.498)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK 149.0 5.0255e-21 139763200.0 6308.0 7628.7699999999995 6946.3099999999995 7151.549999999999 9643.980000000001 7102.1900000000005 7309.74 7350.33 11792.04 10626.26 10732.92 True False 7372.63618420687 8017.041807888782 7931.401208880666 8903.680071045283 8225.363317303061 7853.739031747826 8637.825139192862 8392.261786941546 9121.161768018437 8225.78048574192 8067.639750477401 0.9138529250479479 0.9937282843367387 0.9831129616826689 1.1036288612810716 1.0195501499451964 0.9734865802954429 1.070675613481839 1.0402375473501944 1.1305861503643235 1.0196018588032714 1.0 12.977930948458836 -3.5627138575019233 0.565034894705063 1.0573378234996942 3.772211136583684e-08 0.3876666795126025 0.04599816112053276 16.511355186531954 0.7872439764299412 0.009757674473090998 17.56822940031044 0.00027370714996680936 3.5627138575019233 -1.0573377857775828 SMGTGDTPGLEVPS(ph)SPLRK ddPTM_A549_PD325901_60min_R1 6 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.594)S(0.406)PLRK;SMGTGDT(0.029)PGLEVPS(0.585)S(0.386)PLRK;SMGTGDTPGLEVPS(0.57)S(0.43)PLRK;SMGTGDT(0.001)PGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.616)S(0.384)PLRK;SMGTGDTPGLEVPS(0.62)S(0.38)PLRK 142.85 5.8352e-21 72006000.0 13313.0 13787.32 15557.9 14410.0 17476.9 17167.8 15299.0 15476.1 17283.6 18020.1 17501.1 True False 14664.525959487399 14949.22584300375 16613.75265125279 15300.072972515529 16249.382836031875 17027.99112876595 15881.211816934032 15167.417044734424 16557.230397338033 16882.307810670503 15348.57564861354 0.9554323668341217 0.9739813117026358 1.0824296033458674 0.996839923312207 1.058689953259585 1.109418327706787 1.0347026447609557 0.9881970413394366 1.0787470301085347 1.0999266770526364 1.0 13.905817158921673 -5.629910173566014 6.672160772287577 1.0402007664721105 0.9601906901876822 0.379379260312551 0.04072791213753315 0.1626700485975566 8.818967068576914 0.005495996992672428 0.02174945633605695 2.344713729363278e-06 5.629910173566014 -0.08001007628442824 SMGTGDTPGLEVPSS(ph)PLR ddPTM_A549_MK2206_60min_R1 5 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.189)S(0.811)PLR;SMGTGDTPGLEVPS(0.189)S(0.811)PLR;SMGTGDTPGLEVPS(0.028)S(0.972)PLR;SMGTGDTPGLEVPS(0.084)S(0.916)PLR;SMGTGDTPGLEVPS(0.036)S(0.964)PLR 258.92 4.7558999999999995e-87 115736000.0 14033.6 16073.2 14234.1 13280.7 18969.2 14916.3 13608.2 13989.7 21547.4 22089.5 22236.9 True False 16402.12859142129 16891.257225812027 16252.709416557604 16534.47209619328 16178.855808347289 16494.732965361414 16080.633792606077 15972.782816659423 16666.948304127218 17099.46660817598 16714.864022781396 0.9812899805266818 1.0105530743648419 0.972350681070818 0.9892076940415279 0.9679322420030724 0.9868302214651609 0.9620559144656576 0.9556035152239014 0.9971333467870949 1.0230096149672765 1.0 14.028843998073004 -8.957586720912788 24.998614926359807 0.9987353244533925 0.9787230088916832 0.3644409121573867 0.015827446673332572 128.02129157761524 75456.76924983428 0.0024508044745227297 0.0026069966342556223 1.1025880445705509e-09 8.957586720912788 -0.02001231556170935 SMGTGDTPGLEVPSS(ph)PLR ddPTM_A549_PD325901_60min_R1 4 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.067)S(0.933)PLR;SMGTGDTPGLEVPS(0.088)S(0.912)PLR;SMGTGDTPGLEVPS(0.029)S(0.971)PLR;SMGTGDTPGLEVPS(0.006)S(0.994)PLR 288.0 3.451099999999999e-117 197162000.0 17107.300000000003 15901.599999999999 15685.2 18440.2 19376.1 20247.6 18761.800000000003 19604.399999999998 18336.1 19486.6 19748.4 True False 18844.02050227137 17241.68363867005 16749.691994769884 19579.209273267243 18015.189579916194 20082.710258670395 19475.7905658509 19213.374862645713 17565.49748250536 18256.21275039603 17319.471995421995 1.088025114579264 0.9955086184629354 0.9671017684140303 1.1304737972637133 1.040169676343372 1.1595451792051628 1.1245025582188002 1.109351074196969 1.014205137844179 1.0540859880267506 1.0 14.080107328020695 -8.862652463932399 6.913244339392468 1.0062804733716981 1.075284926353606 0.13581975111818956 0.056839897797063735 0.24231324522359624 14.546520632323848 0.010071084483560795 0.010693025498750869 1.3719792278097446e-09 8.862652463932399 0.06900445298190783 SMGTGDTPGLEVPSS(ph)PLRK ddPTM_A549_MK2206_60min_R1 7 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.057)S(0.943)PLRK;SMGTGDTPGLEVPS(0.093)S(0.907)PLRK;SMGTGDTPGLEVPS(0.302)S(0.698)PLRK;SMGTGDTPGLEVPS(0.096)S(0.904)PLRK;SMGTGDTPGLEVPS(0.083)S(0.917)PLRK;SMGTGDTPGLEVPS(0.028)S(0.972)PLRK;SMGTGDTPGLEVPS(0.06)S(0.94)PLRK 234.99 2.9059999999999994e-85 741646000.0 139399.09999999998 152730.90000000002 146329.3 135886.09999999998 198853.4 158544.09999999998 149089.59999999998 146039.8 229718.90000000002 238043.3 234566.2 True False 162926.26009921898 160504.2504435812 167080.99507719357 169178.2006001591 169602.3282795059 175321.1314289436 176177.25047295896 166741.38887813024 177687.93593570328 184269.1532017477 176316.93884221933 0.9240533619121912 0.9103166802777332 0.947617376834731 0.9595118977851103 0.9619173823751436 0.9943521738761195 0.9992077427717516 0.9456912646795782 1.0077757537221697 1.0451018172828224 1.0 17.427811556070324 -5.978391966121303 0.40903345344281633 1.0034619358518395 0.8771021706681948 0.6931867667556684 0.021318727264324835 1.1078868789114666 0.18076354472430828 0.004415369350945684 0.06152698772133328 1.0510128693669372e-06 5.978391966121303 -0.12635976518364467 SMGTGDTPGLEVPSS(ph)PLRK ddPTM_A549_PD325901_60min_R1 7 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.029)S(0.971)PLRK;SMGTGDTPGLEVPS(0.033)S(0.967)PLRK;SMGTGDTPGLEVPS(0.034)S(0.966)PLRK;SMGTGDTPGLEVPS(0.002)S(0.998)PLRK;SMGTGDTPGLEVPS(0.018)S(0.982)PLRK;SMGTGDTPGLEVPS(0.033)S(0.967)PLRK;SMGTGDTPGLEVPS(0.042)S(0.958)PLRK 219.69 1.5188999999999998e-67 1247277000.0 302008.39999999997 304496.4 329000.10000000003 326519.8 397124.8 391225.7 371870.2 391774.7 384832.6 407827.5 419754.5 True False 332668.0704411663 330157.380258209 351328.0252243185 346688.18646573 369232.1240541851 388039.6876096671 386021.9239561822 383960.44626719307 368659.4241134155 382077.202049723 368127.3575430092 0.9036765772082013 0.8968564098625458 0.9543654336618326 0.9417615381253636 1.0030010443085497 1.0540908727880445 1.0486097163020065 1.0430098127720215 1.0014453328705517 1.0378940717685836 1.0 18.489845442645695 -6.44264717088351 1.512549809506289 1.0119704796011841 0.9067905303423448 0.7880662109636738 0.025126438631148055 0.16970994802189415 0.7446489949198788 0.004152221021378695 0.013655748968852943 3.608717030129489e-07 6.44264717088351 -0.10517994925883933 SMGTLENT(ph)FEGHK ddPTM_A549_MK2206_60min_R1 2 SMGTLENTFEGHK 13 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 SMGTLENT(1)FEGHK;SMGTLENT(1)FEGHK 94.48700000000001 0.00015351 7276900.0 2606.5 2158.3 2201.3 2035.2 3198.4 2454.7 2109.89 2299.7 3678.8 3638.6000000000004 4142.1 True False 3046.413477193278 2268.148251155344 2513.4774407000273 2533.8240913636 2727.919596894861 2714.4547247020128 2493.2297021414747 2625.6895175358777 2845.5576738364384 2816.6377328825492 3113.502253855656 0.9784523115153371 0.7284877498792705 0.807283000225043 0.8138179724218275 0.8761579001642597 0.8718332293932095 0.8007797967879879 0.8433234677393642 0.9139410997093694 0.9046525434161868 1.0 11.604322608240594 -9.354020638917637 0.6634389222651605 0.9908875680790574 0.8300517353798511 0.2773031070941795 0.06502870163451174 0.3417245823406962 0.33234405770607267 0.021421991021873227 0.014314299410219129 4.4256733979532816e-10 9.354020638917637 -0.16083583269920632 SMGTLENT(ph)FEGHK ddPTM_A549_PD325901_60min_R1 1 SMGTLENTFEGHK 13 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 S(0.001)MGT(0.001)LENT(0.998)FEGHK 49.12 0.023163999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SMGYDDLDY(ph)GMMSDYGTAR ddPTM_A549_PD325901_60min_R1 2 SMGYDDLDYGMMSDYGTAR 19 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 S(0.074)MGY(0.003)DDLDY(0.89)GMMS(0.033)DYGTAR;S(0.255)MGY(0.006)DDLDY(0.525)GMMS(0.212)DY(0.002)GTAR 127.78 1.4258e-16 19775000.0 4712.3 3891.4 4751.7 4579.8 4347.6 4923.4 5091.4 4143.8 4950.9 5442.3 5308.5 True False 5190.689226988092 4219.34193486949 5074.178936293321 4862.683844519541 4042.2395744057667 4883.305462748068 5285.156013120984 4061.1486582517873 4742.830890218519 5098.672249211269 4655.588153354077 1.1149373733259687 0.9062962177678243 1.0899114717949598 1.0444832498803107 0.8682554043131094 1.0489126834017597 1.1352284263618424 0.8723169929294474 1.0187393588072409 1.0951725284243574 1.0 12.184747723622662 SMPES(ph)LDSPTSGRPGVTSLTAAAAFKPVGSTGVIK ddPTM_A549_MK2206_60min_R1 2 SMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIK 35 2 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.063)MPES(0.399)LDS(0.378)PT(0.063)S(0.063)GRPGVT(0.011)S(0.011)LT(0.011)AAAAFKPVGSTGVIK;S(0.001)MPES(0.484)LDS(0.484)PT(0.015)S(0.015)GRPGVTSLTAAAAFKPVGSTGVIK 118.58 1.7187999999999997e-21 17603100.0 2869.77 2809.02 3249.8500000000004 3140.73 4324.0 2921.44 3407.3500000000004 3479.93 4551.6 3821.5 4257.7 True False 3354.117016859757 2951.9871197055004 3710.7275976282112 3910.20899099273 3687.9453279681625 3230.5848417050775 4026.421389547207 3973.2207343386635 3520.669867411634 2958.220495852984 3200.3955834579638 1.0480320102290919 0.9223819502075231 1.1594590421284245 1.2217892723023405 1.1523404628572231 1.0094329770991919 1.2581011579814576 1.2414780081797505 1.1000733426858502 0.9243296394805938 1.0 11.644034524468681 -10.049826791939113 1.0697667406376514 1.0128082786935906 1.1243001864237978 0.2477831018972051 0.10096650171767385 0.6081293993814428 1.399588141533209 0.03623192110616773 0.019232320087785183 8.916064633385567e-11 10.049826791939113 0.11149190773020723 SMPESLDS(ph)PTSGRPGVTSLTAAAAFKPVGSTGVIK ddPTM_A549_MK2206_60min_R1 3 SMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIK 35 2 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.005)MPES(0.014)LDS(0.458)PT(0.412)S(0.107)GRPGVT(0.001)S(0.001)LT(0.001)AAAAFKPVGSTGVIK;S(0.001)MPES(0.062)LDS(0.747)PT(0.156)S(0.033)GRPGVTSLTAAAAFKPVGSTGVIK;S(0.001)MPES(0.034)LDS(0.924)PT(0.034)S(0.006)GRPGVTSLTAAAAFKPVGSTGVIK 125.02 7.9144e-22 87382000.0 5320.8 6474.4 6187.799999999999 4851.1 8073.4 5612.4 5680.700000000001 5393.9 8222.3 8532.4 8583.1 True False 6218.820958929598 6803.919305601704 7065.323085251273 6039.619717774157 6885.813554768308 6206.300442790392 6712.809657828173 6158.501843125956 6359.962178315031 6604.924913990842 6451.679388490977 0.9639073153609012 1.0545966245221485 1.0951137928296566 0.936131409218523 1.0672901023339403 0.9619666553582449 1.040474774645966 0.9545579487585799 0.9857839789218978 1.0237528116746217 1.0 12.655459031257497 -7.0653289540694795 1.0303432634839846 0.9917645002154913 1.0282071546478904 0.04257062371478626 0.04867292486811192 0.9365814259592986 1.9456710730835853 0.0072125103404292925 0.01846077075379839 8.603418439221176e-08 7.0653289540694795 0.036442654432399024 SMPESLDS(ph)PTSGRPGVTSLTAAAAFKPVGSTGVIK ddPTM_A549_PD325901_60min_R1 3 SMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIK 35 2 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 SMPES(0.017)LDS(0.751)PT(0.19)S(0.042)GRPGVTSLTAAAAFKPVGSTGVIK;SMPES(0.022)LDS(0.783)PT(0.161)S(0.034)GRPGVTSLTAAAAFKPVGSTGVIK;SMPES(0.006)LDS(0.959)PT(0.028)S(0.006)GRPGVTSLTAAAAFKPVGSTGVIK 165.61 2.3514999999999996e-52 160903000.0 10427.2 10665.0 10753.400000000001 11653.3 13931.0 12638.4 11912.0 12746.0 12776.3 13077.300000000001 12362.599999999999 True False 11485.761667901077 11563.776978820757 11483.190389447282 12373.09787443548 12952.534619340955 12535.477060648163 12365.317678496518 12491.77103095644 12239.356541780064 12251.597046214027 10842.078572978251 1.0593689752929 1.0665645799359171 1.0591318179584932 1.1412108657165605 1.194654192197297 1.1561876236435304 1.1404932730624773 1.152156475059102 1.128875469717057 1.1300044510605858 1.0 13.404353746892463 -10.581122456874045 0.868020677572786 0.9998547218097789 1.1233968469804558 0.0 0.05606938906361955 0.41034175758303226 0.5518152913507801 0.031794296320916876 0.008748954506466988 2.623478703686575e-11 10.581122456874045 0.12354212517067698 SMPESLDSPT(ph)SGRPGVTSLTAAAAFKPVGSTGVIK ddPTM_A549_PD325901_60min_R1 1 SMPESLDSPTSGRPGVTSLTAAAAFKPVGSTGVIK 35 2 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 SMPES(0.059)LDS(0.188)PT(0.608)S(0.143)GRPGVT(0.001)S(0.001)LT(0.001)AAAAFKPVGSTGVIK 120.47 3.2854e-21 92472000.0 4413.1 4439.8 5483.9 4264.0 4521.4 6451.5 4519.3 5144.2 4864.1 5287.1 5681.4 True False 4861.114663247491 4813.957527479456 5856.070431369604 4527.377595753382 4203.832461983221 6398.9611229880065 4691.28443455585 5041.594895453171 4659.678792363391 4953.271603697873 4982.623817361936 0.9756134200436632 0.9661491021467921 1.1752985266445655 0.9086332345576139 0.8436985443964244 1.2842553155810896 0.941528922614845 1.0118353462458376 0.9351857501517085 0.9941090849440037 1.0 12.28268994090044 SMS(ph)APSDLEMIGNEDLEFTR ddPTM_A549_PD325901_60min_R1 1 SMSAPSDLEMIGNEDLEFTR 20 0 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;Q9Y4D8-2 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 S(0.134)MS(0.865)APSDLEMIGNEDLEFTR 105.38 4.2999999999999996e-10 2457600.0 1046.6 709.06 830.15 992.86 1115.3 1181.9 938.41 699.88 967.82 728.8 1078.0 True False 1152.8500615338016 768.8149746462865 886.4889710974819 1054.186707251337 1036.9651755761236 1172.2749982576963 974.1217060676552 685.9203443547618 927.1458910847101 682.7834436222136 945.4128340050283 1.2194144399859819 0.8132055616268452 0.937673933769305 1.115054364965105 1.0968384797393265 1.2399609526048188 1.030366492848429 0.7255246805239727 0.9806783425575741 0.7222066583650609 1.0 9.88480063922878 -8.01200312510808 24.98656578192222 0.9663017973480414 1.0624809572583407 0.19692615397249924 0.1527579773405617 1086.9103337401843 2262592.0693710325 0.021568683012275477 0.028649084796500555 9.727402240811403e-09 8.01200312510808 0.09617915991029924 SMS(ph)DVSAEDVQNLR ddPTM_A549_MK2206_60min_R1 6 SMSDVSAEDVQNLR 14 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10;E9PK58;E9PLU6 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.004)MS(0.996)DVSAEDVQNLR;S(0.104)MS(0.896)DVS(0.001)AEDVQNLR;S(0.001)MS(0.999)DVSAEDVQNLR;S(0.006)MS(0.994)DVSAEDVQNLR;S(0.013)MS(0.969)DVS(0.018)AEDVQNLR;S(0.353)MS(0.64)DVS(0.007)AEDVQNLR 268.93 1.0384e-83 60871800.0 12714.849999999999 13145.789999999999 11858.599999999999 12740.42 17588.7 13369.269999999999 11748.11 13915.93 17596.600000000002 18853.8 18025.3 True False 14860.805831763271 13814.854560791084 13540.32779643181 15861.82347193919 15001.425529610004 14783.997277596816 13882.589517001017 15888.555693248263 13610.998195996046 14594.713485467213 13549.120537028164 1.0968096262152531 1.019612640026096 0.9993510471345852 1.17069026204252 1.1071881373121495 1.0911407302927063 1.0246118542573683 1.1726632477603764 1.004566913313582 1.0771705400052767 1.0 13.725911589944424 -8.940684007773454 24.99961615273911 1.0020144371265847 1.082375997853649 0.12778713476971892 0.05774045753387259 62.380695342122976 26291.12865570007 0.009003628566364425 0.009584915822791328 1.1463467187961564e-09 8.940684007773454 0.08036156072706424 SMS(ph)DVSAEDVQNLR ddPTM_A549_PD325901_60min_R1 4 SMSDVSAEDVQNLR 14 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424;E9PJ10;E9PK58;E9PLU6 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.051)MS(0.949)DVS(0.001)AEDVQNLR;S(0.019)MS(0.969)DVS(0.013)AEDVQNLR;SMS(0.995)DVS(0.005)AEDVQNLR;S(0.044)MS(0.955)DVS(0.001)AEDVQNLR 211.51 2.7712e-38 54721100.0 9576.8 10341.24 10252.29 10105.6 11313.900000000001 10929.7 10771.5 11749.3 10735.3 11586.599999999999 11374.3 True False 10549.029685932463 11212.732587384931 10948.072051428057 10729.799960517197 10519.250694836108 10840.692146930487 11181.415326890963 11514.950994352463 10284.13267401137 10855.02009861847 9975.333207628382 1.0575115102787103 1.1240459194696655 1.097514421178011 1.075633238227256 1.05452624748332 1.0867498780532308 1.1209064493545198 1.1543424920930658 1.0309563059153595 1.0881862162075318 1.0 13.28414931737193 -8.930704777680251 7.60435750690134 1.013532440862943 1.0958148459348118 0.2686519596930683 0.03603319188861329 0.11291144706659989 10.554390091502043 0.0052159094857304545 0.005524027113710049 1.1729924649746283e-09 8.930704777680251 0.0822824050718689 SMS(ph)ENAVR ddPTM_A549_MK2206_60min_R1 5 SMSENAVR 8 0 A0A0A0MS29;Q9GZY8-2;H7C433;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.089)MS(0.911)ENAVR;S(0.198)MS(0.802)ENAVR;S(0.046)MS(0.954)ENAVR;S(0.008)MS(0.992)ENAVR;S(0.015)MS(0.985)ENAVR 142.55 0.0010029 808800000.0 12193.5 14510.4 13704.9 13365.8 21369.1 14421.399999999998 15905.0 16834.4 25262.0 23558.3 25093.0 True False 14251.464697547002 15248.917381070529 15648.460899036834 16640.421600013568 18225.733697475593 15947.462975849432 18794.732622345313 19220.727753187806 19540.19733512452 18236.463668050073 18861.715568431475 0.7555762701352273 0.8084586646292332 0.8296414418011578 0.8822326654031594 0.9662818650483568 0.8454937684746144 0.9964487352254283 1.0190339093733978 1.0359713709090497 0.9668507406914844 1.0 14.203173281941366 -6.492498512584913 0.5074698110593445 1.0205605338479844 0.7268024084384692 0.793785389808919 0.04207655693292192 0.45833354932000775 0.15862932040648928 0.00873750295741432 0.06435872673580191 3.217373551858787e-07 6.492498512584913 -0.2937581254095152 SMS(ph)ENAVR ddPTM_A549_PD325901_60min_R1 5 SMSENAVR 8 0 A0A0A0MS29;Q9GZY8-2;H7C433;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.021)MS(0.979)ENAVR;S(0.381)MS(0.619)ENAVR;S(0.081)MS(0.919)ENAVR;S(0.001)MS(0.999)ENAVR;S(0.081)MS(0.919)ENAVR 125.7 0.0010915999999999999 2809700000.0 22543.9 24352.199999999997 23593.899999999998 22707.6 27259.1 24595.5 24455.9 24319.2 27297.299999999996 25997.799999999996 29485.1 True False 24832.540132057962 26404.445358053345 25195.12393564641 24110.196879298663 25344.514854789843 24395.202402612034 25386.58265728198 23834.134477956664 26150.08940991779 24356.29447118768 25858.619621448677 0.9603196340558092 1.0211080770975078 0.9743414112773474 0.9323853025511165 0.9801186306854367 0.9434069861322838 0.9817454693608176 0.921709465813373 1.0112716685088383 0.9419023454363017 1.0 14.658357643156876 -8.834674598507469 24.999999999994223 1.0053228442384055 0.9659483811380307 0.0 0.03201228958126913 33.7572717761422 11522.772717739334 0.004321823188797011 0.004600931285521887 1.4632731426242119e-09 8.834674598507469 -0.039374463100374735 SMS(ph)FQGIR ddPTM_A549_PD325901_60min_R1 2 SMSFQGIR 8 0 P15924-2;P15924-3;P15924 P15924-2 DSP Desmoplakin 1 S(0.379)MS(0.621)FQGIR;S(0.001)MS(0.999)FQGIR 91.65799999999999 0.0026046999999999997 25538000.0 3994.9 4723.1 4448.9 4331.2 5741.6 5005.8 4721.5 4727.1 5284.6 4315.9 5481.6 True False 4400.459307110058 5121.13221272089 4750.829107409002 4598.728387131108 5338.329823444695 4965.034424467701 4901.179266203938 4632.81428216179 5062.506639691534 4043.3933374439002 4807.397950725381 0.9153515794227269 1.065260722164299 0.9882329601384793 0.9565940731903032 1.1104405913887787 1.0327903941712449 1.01950770800333 0.9636843734691762 1.053065856328299 0.8410773101972553 1.0 12.231040517672911 -5.246282385603121 24.27033649222127 1.0224369991483704 0.9153514630783076 0.057654796871423164 0.06940280294170384 1652.9904457467746 2646808.6227319045 0.005694069530861086 0.18220542148290744 5.6717569827365185e-06 5.246282385603121 -0.10708553607006277 SMS(ph)PFR ddPTM_A549_MK2206_60min_R1 1 SMSPFR 6 0 Q99640-4;Q99640-3;Q99640;B4DZM6;I3L4K3;I3L3P0;I3L136;A6NHV6;Q99640-2;I3L1H7 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 S(0.011)MS(0.989)PFR 66.682 0.055698000000000004 9792500.0 791.1 865.54 498.82 652.73 1265.7 696.46 594.05 738.51 1038.2 1265.0 831.76 True False 924.618339461962 909.5922889797508 569.5601767001262 812.6488793021632 1079.517206662652 770.1589349272682 701.9811954922499 843.1960540920212 803.0493576647242 979.2356214193439 625.2110365918205 1.4788899832963354 1.4548564176636463 0.9109886796063921 1.2997993185342867 1.7266445143824816 1.2318383551346028 1.1227907928799887 1.34865830054519 1.2844452683406617 1.566248137200838 1.0 9.288199435635896 -11.094681590038595 0.34966804129926177 0.8338395586079661 1.3412198588545976 0.0 0.2596252079807021 3.966533457036237 0.49998884761251217 0.7882445350558197 0.07245342724636586 8.041154562565582e-12 11.094681590038595 0.5073803002466315 SMS(ph)PFR ddPTM_A549_PD325901_60min_R1 2 SMSPFR 6 0 Q99640-4;Q99640-3;Q99640;B4DZM6;I3L4K3;I3L3P0;I3L136;A6NHV6;Q99640-2;I3L1H7 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 S(0.014)MS(0.986)PFR;S(0.007)MS(0.993)PFR 80.098 0.043056 25057000.0 3634.6 3681.0 3325.2 3263.0 4186.5 3557.7 3509.1 3465.1 3508.0 3594.9 3370.2 True False 4003.581916348896 3991.2107884706243 3550.8680680519724 3464.548099189325 3892.454682640939 3528.7272707516745 3642.6407207531993 3395.9858621816356 3360.570959398607 3367.91740049053 2955.686765458019 1.3545352515487183 1.3503497174038799 1.2013681928510185 1.1721634848720013 1.3169374807001095 1.193877278198272 1.2324177119589763 1.1489667653112716 1.136984811338033 1.1394703389581373 1.0 11.529277669888678 -5.837053581566268 0.03193480913467597 3.8178629568511565e-08 2.575899490406486 0.5991877619799046 0.06390076673571617 109.46746771024941 0.6177916288314235 20.21149782149302 30.33495393911586 1.4552795227707738e-06 5.837053581566268 2.575899452227856 SMS(ph)PFRGPK ddPTM_A549_MK2206_60min_R1 1 SMSPFRGPK 9 1 Q99640-4;Q99640-3;Q99640;B4DZM6;I3L4K3;I3L3P0;I3L136;A6NHV6;Q99640-2 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 S(0.007)MS(0.993)PFRGPK 81.525 0.00044227 21020000.0 7489.4 9071.4 8627.7 7522.6 10941.0 9308.8 8096.5 7705.1 12226.0 11429.0 11231.0 True False 8753.427621749992 9533.095512917851 9851.237593752614 9365.637337702343 9331.593393455065 10293.851037318655 9567.529247206461 8797.321520879108 9456.830520910153 8847.180962214767 8442.032740168721 1.0368862442453697 1.129241713024596 1.1669271959677012 1.1094054744823416 1.1053728030517642 1.2193569196123402 1.1333205569888902 1.042085690928425 1.1202077523240155 1.0479917852152216 1.0 13.043374709075843 -10.752144666245222 0.5005082036959797 0.9728888843440513 1.1259514630574146 0.3359435328491981 0.04990082143804522 1.117518519526317 0.36637595559138486 0.08376353792461842 0.011710542369642767 1.7695194219960265e-11 10.752144666245222 0.15306257871336326 SMS(ph)PFRGPK ddPTM_A549_PD325901_60min_R1 4 SMSPFRGPK 9 1 Q99640-4;Q99640-3;Q99640;B4DZM6;I3L4K3;I3L3P0;I3L136;A6NHV6;Q99640-2 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 S(0.452)MS(0.548)PFRGPK;S(0.136)MS(0.864)PFRGPK;S(0.006)MS(0.994)PFRGPK;SMS(1)PFRGPK 93.839 0.00026912 62667100.0 35810.4 34423.9 37842.6 37829.4 45976.8 40648.3 43101.5 40549.3 43447.4 42667.0 43764.8 True False 39445.84544577686 37324.92286368756 40410.82640204008 40166.03612119908 42747.548179349345 40317.27372170093 44741.751168545816 39740.51240118953 41621.45687040342 39972.99833840423 38382.0070479251 1.027717112253234 0.9724588611815524 1.0528586051162392 1.0464808698264887 1.1137392613672672 1.0504211953105889 1.1656959760514796 1.0353943281696592 1.084400219572505 1.041451487633061 1.0 15.228142533562698 -5.805422152979816 12.225306969532275 1.0554203153701145 1.0001115453707383 0.21910067473234274 0.04442295586533846 1.078904116133946 298.5620169474334 0.006879434868014849 0.02143840319179932 1.5652288603963379e-06 5.805422152979816 -0.05530876999937617 SMS(ph)PTSTPK ddPTM_A549_PD325901_60min_R1 2 SMSPTSTPK 9 0 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(0.003)MS(0.982)PT(0.015)STPK;S(0.069)MS(0.887)PT(0.032)S(0.011)T(0.001)PK 135.86 4.5014e-05 47429000.0 9621.6 10879.9 11064.0 10989.0 12699.2 12813.5 14154.8 13753.599999999999 12770.7 14611.4 14541.0 True False 10598.37774895245 11796.787356012368 11814.86957323681 11667.765572170238 11807.252001861658 12709.151104302384 14693.46865980377 13479.27365850952 12233.99189030553 13688.833710402876 12752.549182993605 0.831079151067781 0.9250532726228721 0.9264712022434499 0.9149359398456584 0.9258738650941597 0.9965969095222863 1.1521985486163435 1.0569866044104383 0.9593369697895691 1.073419401405475 1.0 13.63849804436383 -7.188717782469783 3.7682343592965113 1.0020393371214351 0.9052138757191741 0.5165317029024736 0.05952046452377618 0.21133220213706283 5.858537036119911 0.009341598002503644 0.016504378308744086 6.475632850225905e-08 7.188717782469783 -0.096825461402261 SMS(ph)TLTPR ddPTM_A549_PD325901_60min_R1 1 SMSTLTPR 8 0 Q9NS62-2;Q9NS62 Q9NS62-2 THSD1 Thrombospondin type-1 domain-containing protein 1 1 S(0.226)MS(0.671)T(0.103)LT(0.001)PR 71.34899999999999 0.0061679 3434000.0 1967.8 1704.0 1745.3 1737.5 1959.4 2259.6 1992.5 1657.8 1911.5 1845.5 2393.0 True False 2167.5696073822046 1847.602060188519 1863.7465533414863 1844.8214288511954 1821.7785035630386 2241.198566767991 2068.3256778378354 1624.7338784810584 1831.1663024203087 1728.9748150450005 2098.67617047684 1.0328270925617415 0.8803654828599524 0.8880581861841146 0.8790405374603523 0.8680607943192649 1.0679106182726459 0.985538267853821 0.7741708327073169 0.8725339946106357 0.8238406855556759 1.0 11.035263858014774 -10.947976048379264 1.2760828799785238 0.998870212510617 0.9105570962167261 0.0 0.09485151245977468 0.7190931364695 2.123811880266179 0.05337598166876563 0.013157112387144775 1.1272596235563729e-11 10.947976048379264 -0.08831311629389094 SMS(ph)YSSQK ddPTM_A549_MK2206_60min_R1 2 SMSYSSQK 8 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 S(0.195)MS(0.798)Y(0.003)S(0.003)SQK;S(0.175)MS(0.823)YS(0.001)SQK 63.283 0.0035364000000000003 54353000.0 5055.200000000001 5233.6 5118.9 3715.4 6328.6 4704.5 3728.6 4564.4 6816.400000000001 6668.8 7154.900000000001 True False 5908.394172226153 5499.96788548701 5844.836992322433 4625.673166790647 5397.6713234457275 5202.327067405641 4406.038356219849 5211.417677888749 5272.496283554061 5162.313448317251 5378.140864805736 1.098594164926093 1.0226522554436057 1.0867764789447467 0.8600877669569429 1.0036314516727887 0.9673095588569257 0.8192493404277912 0.9689998475108722 0.9803566727039436 0.9598695121764385 1.0 12.392891827581167 -6.208945302600644 24.998775403722576 0.9689899785411799 1.0646721551302325 0.420510917318658 0.06035035095853671 307.85555508718886 146606.73839137013 0.008537981610296898 0.022589361154611555 6.18094241373033e-07 6.208945302600644 0.09568217658905265 SMS(ph)YSSQK ddPTM_A549_PD325901_60min_R1 2 SMSYSSQK 8 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 S(0.015)MS(0.966)YS(0.018)S(0.001)QK;S(0.118)MS(0.881)YS(0.001)SQK 92.23899999999999 0.00091923 69617000.0 9312.6 10702.8 12305.900000000001 12110.3 12957.2 12393.8 10341.9 11223.3 11217.400000000001 12753.2 13737.7 True False 10258.008296426222 11604.762517479867 13141.052375388173 12858.325726513163 12047.130971913346 12292.869001951296 10735.466663804831 10999.442476991471 10745.971687559277 11947.960775525273 12048.04999045536 0.8514247786615067 0.9632067037133253 1.0907202730565284 1.0672536831022212 0.999923720557041 1.0203202187648528 0.8910542927950684 0.9129645449434048 0.8919262200997167 0.9916924967103076 1.0 13.556512040796797 -7.741198873332642 24.990136364424064 0.9404475635378373 1.004529668868694 0.17096668472802679 0.06640389547283639 357.0771723516236 440867.7397247964 0.011145590660433002 0.016520749725981373 1.8146844871314513e-08 7.741198873332642 0.06408210533085668 SMSQVDVDS(ph)GIENMEVDENDRR ddPTM_A549_PD325901_60min_R1 1 SMSQVDVDSGIENMEVDENDRR 22 1 O95155-2;O95155;O95155-4 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 S(0.001)MS(0.001)QVDVDS(0.998)GIENMEVDENDRR 51.473 0.0016297 3303200.0 673.44 725.22 453.14 689.92 726.79 698.57 677.75 661.17 882.45 594.42 650.61 True False 741.8071330396751 786.3368345598113 483.8928053521807 732.5347914779951 675.7427776893842 692.8810775301457 703.5421471290306 647.9824456721689 845.3636953025374 556.8882197556478 570.5890945565965 1.3000723990635183 1.3781140264709615 0.8480582786606056 1.2838219280150216 1.1842896826033844 1.2143258329684377 1.2330101536128228 1.1356376275920845 1.4815630080688234 0.9759881937253014 1.0 9.156308363298866 -7.401539348753507 1.8559741319899288 1.2255188467294127 1.1928120983373591 0.0 0.180883642739295 3.0521292496141728 20.647900734949733 0.03280195528511657 0.05772960847306656 3.966985848829745e-08 7.401539348753507 -0.032706748392053564 SMSSIPPYPAS(ph)SLASSSPPGSGR ddPTM_A549_PD325901_60min_R1 1 SMSSIPPYPASSLASSSPPGSGR 23 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SMSSIPPY(0.01)PAS(0.326)S(0.326)LAS(0.111)S(0.111)S(0.111)PPGS(0.002)GR 50.358000000000004 0.0034454 3884900.0 388.34 304.06 293.15 750.6 295.49 490.04 646.64 564.95 452.83 380.97 481.97 True False 427.76399091920194 329.6842032986627 313.044921854155 796.9628572637163 274.7358017851599 486.0492767122443 671.2482390549851 553.6816290552986 433.7991298587436 356.91548918325293 422.69074545955783 1.012002262917132 0.7799655110504571 0.7406003685124601 1.8854513987460082 0.6499688122730523 1.149893348584677 1.588036280106371 1.3098976852529025 1.0262801694111106 0.8443891734492727 1.0 8.723458715614541 SMSSIPPYPASSLASS(ph)SPPGSGR ddPTM_A549_PD325901_60min_R1 1 SMSSIPPYPASSLASSSPPGSGR 23 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SMSSIPPY(0.01)PAS(0.058)S(0.058)LAS(0.049)S(0.405)S(0.405)PPGS(0.016)GR 48.51 0.0040436 4439200.0 491.57 737.43 477.85 431.85 888.02 719.62 759.11 1070.9 706.83 763.99 804.05 True False 541.4738245252926 799.5758141108101 510.2797745454815 458.5243936974898 825.6485387026892 713.7596533092508 787.998346450931 1049.5400593952022 677.1243931675364 715.7515410166505 705.1569472928969 0.7678770330548609 1.1338976623294827 0.723640001710895 0.650244453320312 1.1708720191616355 1.012199703979915 1.1174793774294685 1.4883779609977534 0.9602463618447244 1.0150244477692894 1.0 9.461800584706374 -6.77118284896009 24.99985661561776 1.043639969571621 0.8346082047693056 0.33115582801332377 0.18350866351405581 241.68023922844992 620105.7519706715 0.02777651631734104 0.052954474339548516 1.6936245915339513e-07 6.77118284896009 -0.20903176480231533 SMTSLS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SMTSLSPR 8 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H3BLZ3 WWC1 Protein KIBRA 1 S(0.007)MT(0.007)S(0.007)LS(0.978)PR 43.185 0.025485 5113600.0 992.55 1009.5 939.87 713.23 1521.5 1024.3 931.53 1011.7 1834.1 1211.9 1493.0 True False 1160.0681744823278 1060.8792380768748 1073.1576987192723 887.9713820181112 1297.6893655188621 1132.690746124689 1100.7769430803733 1155.1115732013075 1418.6792784558572 938.1309482988954 1122.2468952962254 1.0337013890121916 0.9453171512645155 0.9562581132701681 0.7912442313183896 1.1563314373672893 1.0093061971231445 0.9808687800288501 1.0292847126980977 1.2641418607635233 0.8359398918642308 1.0 10.132174389695287 -8.535301740290084 24.757269877886085 1.1258904909250336 0.9817032934978923 0.0 0.1318541470520378 222.86683914753513 444140.27083424374 0.02036515844295614 0.023099491103954872 2.9154007401926124e-09 8.535301740290084 -0.14418719742714126 SMVDASEEKT(ph)PEQIMQEK ddPTM_A549_MK2206_60min_R1 1 SMVDASEEKTPEQIMQEK 18 1 D6RBJ6;B3KVZ3;Q9H3R5;H0Y9E6 D6RBJ6 CENPH Centromere protein H 1 S(0.022)MVDAS(0.15)EEKT(0.828)PEQIMQEK 58.284 0.0023096 3294700.0 2207.1 2300.4 2286.4 2061.5 2710.8 2186.9 1959.7 1974.2 3617.2 2872.6 3344.1 True False 2579.6045215857594 2417.48053419717 2610.6459003391374 2566.567592544253 2312.044910975046 2418.3163064532673 2315.752123232324 2254.0488957339353 2797.9099754814497 2223.677664892654 2513.667677535237 1.0262313290813272 0.9617343437250294 1.0385803675126188 1.0210449119753517 0.9197894103655376 0.9620668348747413 0.9212642323121335 0.896717141998711 1.1130787098415988 0.8846347052021883 1.0 11.295578213790849 -8.766614204259353 24.999975052012545 1.053398275536124 0.9688921945166097 0.0 0.07118796236978762 116.86086588221126 564562.1096876725 0.010287890807296763 0.011113928251125475 1.7115350436650401e-09 8.766614204259353 -0.08450608101951429 SNAAT(ph)PTKGPEGK ddPTM_A549_PD325901_60min_R1 2 SNAATPTKGPEGK 13 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 S(0.008)NAAT(0.784)PT(0.208)KGPEGK;SNAAT(0.847)PT(0.153)KGPEGK 82.48200000000001 0.00020888 57332000.0 9217.3 8966.6 9279.0 8835.5 10775.5 10625.2 10236.3 10454.8 9348.8 9790.3 10531.1 True False 10153.033510582374 9722.246850285439 9908.728739159831 9381.248768123583 10018.666053456938 10538.671893973828 10625.847998018295 10246.27081236806 8955.902447327742 9172.138787176951 9235.841462143184 1.0993079030425839 1.0526649780787147 1.0728560878588862 1.0157438070560663 1.084759422790276 1.1410624507978855 1.1505013421432808 1.1094030635288108 0.9696899285286691 0.9931026669061672 1.0 13.173027693401782 -8.762614633298037 24.99989533183542 0.9856869059868644 1.0898828461145074 0.6159027608073538 0.0362786198282055 16.003861605478903 340432.85518280766 0.006983378276924136 0.007639622015893989 1.727369975974003e-09 8.762614633298037 0.104195940127643 SNDDLDVS(ph)ESK ddPTM_A549_MK2206_60min_R1 2 SNDDLDVSESK 11 0 Q96EB6;B0QZ35;E9PC49 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 SNDDLDVS(1)ESK;SNDDLDVS(0.513)ES(0.487)K 123.02 7.4463e-06 3923100.0 2049.16 2121.95 1966.42 1952.6399999999999 3102.7 2543.2 1980.3400000000001 2655.3 3558.3999999999996 2840.9 2562.1000000000004 True False 2395.0081108480263 2229.9481914187463 2245.287924835936 2431.0368876573393 2646.296940121838 2812.319735960467 2340.1421440638355 3031.6969065152034 2752.4280815971447 2199.1387169092613 1925.859859637281 1.2436045638850926 1.1578974348833138 1.1658625696985119 1.262312455131187 1.3740859319951997 1.4602930332065507 1.215115488467879 1.5742043177981793 1.429194376643553 1.1418996589520538 1.0 10.911287010085296 -10.863148075450892 1.1527157258807346 1.0029090096746818 1.3265782438700022 0.3378824315442984 0.1300884711899864 0.3567263979227143 0.853527536102618 0.08993539538088581 0.02266080586577687 1.3704144350289499e-11 10.863148075450892 0.32366923419532045 SNDDLDVS(ph)ESK ddPTM_A549_PD325901_60min_R1 2 SNDDLDVSESK 11 0 Q96EB6;B0QZ35;E9PC49 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 SNDDLDVS(0.996)ES(0.004)K;SNDDLDVS(0.998)ES(0.002)K 89.62899999999999 3.4235e-05 1456200.0 994.95 1083.2 769.9 1149.6 1245.1 1192.7 1214.3 1084.8 971.16 1112.1 1035.9 True False 1095.9565915565229 1174.485065490731 822.1500437847995 1220.6081810689695 1157.648471361814 1182.987046638424 1260.5108509904562 1063.1628129908636 930.3455224998728 1041.8818162078267 908.4908671111399 1.2063484964262712 1.292786871072696 0.9049623651133767 1.3435558080515595 1.2742543852344457 1.3021452272824046 1.3874777354655037 1.1702515143289844 1.0240559989977966 1.1468269565778348 1.0 9.827328201163455 -8.679107293155147 3.674940746848065 1.0105105971679291 1.2425329292606713 0.27936077186800523 0.1254165279986106 0.1564271394783753 4.134595696497936 0.02029287932421412 0.02276240957217022 2.093595165878301e-09 8.679107293155147 0.23202233209274215 SNDIDLEGFDSVVSS(ph)TEK ddPTM_A549_PD325901_60min_R1 1 SNDIDLEGFDSVVSSTEK 18 0 Q5JPT2;Q96B97-2;Q96B97;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 SNDIDLEGFDS(0.006)VVS(0.175)S(0.644)T(0.175)EK 69.935 0.00026276 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SNDRNS(ph)MDIQCEVDALLER ddPTM_A549_MK2206_60min_R1 1 SNDRNSMDIQCEVDALLER 19 1 H7BYN4;H0YME6;A0A2R8Y531;Q02241;A0A2U3TZL8;Q02241-2 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 S(0.162)NDRNS(0.838)MDIQCEVDALLER 57.578 0.0014034000000000002 30803000.0 684.25 942.52 810.88 593.85 1005.2 697.04 729.81 767.8 1000.6 1127.2 1226.2 True False 799.734671693651 990.4902421715863 925.8749771111784 739.3432766589393 857.3364115803882 770.8003101422951 862.4070301863462 876.6380012888842 773.9656976298623 872.5647371256006 921.7006986016285 0.8676728496647339 1.074633277021839 1.0045288872145621 0.8021511514319613 0.9301679090415236 0.8362804881364698 0.9356692812479794 0.9511091861152847 0.8397147781314429 0.9466898945063454 1.0 9.84815453398215 SNDRNS(ph)MDIQCEVDALLER ddPTM_A549_PD325901_60min_R1 3 SNDRNSMDIQCEVDALLER 19 1 H7BYN4;H0YME6;A0A2R8Y531;Q02241;A0A2U3TZL8;Q02241-2 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 S(0.033)NDRNS(0.967)MDIQCEVDALLER;S(0.096)NDRNS(0.904)MDIQCEVDALLER;SNDRNS(1)MDIQCEVDALLER 244.21 5.7502999999999984e-86 107579000.0 3980.8199999999997 4430.19 4610.25 3763.76 3732.85 4140.35 4501.610000000001 4352.1 2981.53 3943.0299999999997 4419.48 True False 4384.949915875207 4803.537659053155 4923.129288685378 3996.2389070808513 3470.667493633402 4106.63236232867 4672.92123192551 4265.2939513436 2856.226662649869 3694.0664128782905 3875.9119773919665 1.131333720025748 1.2393309463868092 1.2701860407052035 1.0310448045236185 0.8954453852093808 1.059526734941992 1.2056314124733651 1.1004620270591496 0.7369173188942681 0.9530831542165112 1.0 11.920320091941896 -8.678431043420115 8.606780368922326 0.8759140915146464 1.1174198381587233 0.4151076445236045 0.1156355520313887 0.20824719898381092 19.431585549737086 0.023698563904793586 0.02686023719286879 2.096857689555961e-09 8.678431043420115 0.24150574664407687 SNDS(ph)GEEAEK ddPTM_A549_MK2206_60min_R1 1 SNDSGEEAEK 10 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.003)NDS(0.997)GEEAEK 65.395 0.005582999999999999 2270000.0 1407.4 1044.3 759.01 709.16 534.7 283.04 199.82 260.36 431.46 1792.9 1714.2 True False 1644.9347123736115 1097.4504094340568 866.6490311478346 882.9042318354016 456.046338312807 312.9911049332539 236.12470748802517 297.26682731905953 333.7349989000407 1387.8826447768713 1288.5168304867977 1.2766109634378313 0.8517160067047346 0.6725942654706476 0.6852097007548151 0.35393122349865935 0.24290804553558434 0.1832531030260722 0.2307046522681066 0.2590070932747977 1.0771164271502247 1.0 10.33149566633091 -5.240846134721737 1.182045496375342 0.5317500870809567 1.6471323366221249 0.38634698953399504 0.292229124224905 1.5919716713587606 1.7476392411915826 0.05070149807024403 2.2040212117059808 5.7431990075659466e-06 5.240846134721737 1.115382249541168 SNDS(ph)GEEAEK ddPTM_A549_PD325901_60min_R1 2 SNDSGEEAEK 10 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.014)NDS(0.986)GEEAEK;SNDS(1)GEEAEK 109.84 0.00020266 6924500.0 2807.3 2434.7 1946.98 1976.22 2081.6000000000004 1680.48 1353.3899999999999 1727.1100000000001 2371.56 2155.34 2784.7 True False 3092.2950293749695 2639.8807135803927 2079.113770941847 2098.2866210787383 1935.3955971301511 1666.7947280413682 1404.893997053425 1692.661436158415 2271.891580522053 2019.251464567375 2442.19955366772 1.2661926109727313 1.0809439014169802 0.8513283723352636 0.8591790207837481 0.7924805301940026 0.6824973518393118 0.5752576585904051 0.6930889138917248 0.93026451385191 0.8268167363861986 1.0 11.253965373326652 -5.519208231345353 2.6970905759618438 0.8783317917577381 1.2648053649775246 0.4919322754629297 0.13311696073325938 0.26880179626997025 3.4642502597766653 0.023444104729424948 0.17700435021671126 3.02546246061005e-06 5.519208231345353 0.3864735732197865 SNDS(ph)GEEAEKEFIFV ddPTM_A549_MK2206_60min_R1 2 SNDSGEEAEKEFIFV 15 1 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.015)NDS(0.985)GEEAEKEFIFV;SNDS(1)GEEAEKEFIFV 180.31 6.0095e-42 43350000.0 34228.0 36957.0 31736.0 28640.0 56240.0 43357.0 44459.0 41905.0 60358.0 53473.0 53937.0 True False 40004.84960574395 38837.95344389014 36236.64201065555 35656.80128569844 47967.170500677516 47945.00896195267 52536.62481338263 47845.16207868021 46687.00937192012 41393.41216138862 40542.9543145295 0.9867275407556397 0.9579458157535319 0.8937839539154974 0.87948206756408 1.183119763018537 1.1825731442755387 1.2958262588810634 1.1801104011192838 1.1515443351691999 1.0209767112742036 1.0 15.307163599573489 -6.757670592430505 24.99906446075198 1.1136768583458225 0.9289676917134525 0.587993287068408 0.08419308301536428 73.99881495159093 490840.6615829171 0.014917534924450063 0.030135276920586786 1.7471468420654772e-07 6.757670592430505 -0.18470916663237003 SNDS(ph)GEEAEKEFIFV ddPTM_A549_PD325901_60min_R1 2 SNDSGEEAEKEFIFV 15 1 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SNDS(1)GEEAEKEFIFV;SNDS(1)GEEAEKEFIFV 226.08 3.3342000000000003e-54 73601000.0 38986.0 39914.0 42529.0 44678.0 48443.0 44432.0 45788.0 48777.0 46747.0 48789.0 48224.0 True False 42943.8300200237 43277.6928581952 45415.27368765256 47437.658588900005 45040.53079927743 44070.160523382656 47530.487396155 47804.10447018377 44782.386157071494 45708.45421361715 42292.75371712288 1.0153945119595562 1.0232886027630201 1.0738310867959746 1.1216497962319756 1.0649703989608525 1.042026272825554 1.123844706685806 1.1303143037202974 1.0588666431275826 1.0807632560258513 1.0 15.368122878074098 -10.04941257262119 0.9968604542364065 1.0067818372283992 1.0737486467670092 0.0 0.04350428768810058 0.42526622401729164 0.8506970806285495 0.015019133088262542 0.0076507111943511456 8.924572611656852e-11 10.04941257262119 0.06696680953861 SNEDQS(ph)MGNWQIK ddPTM_A549_MK2206_60min_R1 1 SNEDQSMGNWQIK 13 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.045)NEDQS(0.955)MGNWQIK 66.533 0.0014387 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SNEDS(ph)LILEK ddPTM_A549_MK2206_60min_R1 1 SNEDSLILEK 10 0 A0A0U1RRH6;O94880 A0A0U1RRH6 PHF14 PHD finger protein 14 1 S(0.002)NEDS(0.998)LILEK 125.97 1.0076e-05 13397000.0 6908.6 8901.2 6352.6 6025.3 10445.0 7686.6 6954.6 7764.7 10178.0 10089.0 10022.0 True False 8074.60278094667 9354.233059900827 7253.494203330305 7501.498770485992 8908.554336407838 8499.990910047865 8218.160798199477 8865.370003396456 7872.699250926183 7809.887892885193 7533.260806871242 1.0718602459086055 1.2417243076688171 0.9628624826999543 0.9957837598883769 1.182562845598305 1.1283282403145858 1.0909168033454415 1.1768303568237237 1.0450586343360544 1.0367207631735826 1.0 12.879058761990322 -8.959519000259341 7.301938920870376 1.0196233934349792 1.1056452071254272 0.17931222980678052 0.07659095484121023 0.23569753063486068 32.15983212967716 0.013391518565061442 0.014033090208044594 1.0976932654568472e-09 8.959519000259341 0.08602181369044803 SNEDS(ph)LILEK ddPTM_A549_PD325901_60min_R1 2 SNEDSLILEK 10 0 A0A0U1RRH6;O94880 A0A0U1RRH6 PHF14 PHD finger protein 14 1 SNEDS(1)LILEK;SNEDS(1)LILEK 158.52 1.2024999999999998e-08 38144000.0 15211.099999999999 14015.2 13769.9 15913.0 17943.5 16201.1 15032.9 16737.6 15787.7 14845.400000000001 17280.2 True False 16755.319674180028 15196.31009034867 14704.408219135341 16895.90986895487 16683.21046171449 16069.163613057593 15604.98523581853 16403.75543760681 15124.19787220566 13908.058910468193 15154.844948213078 1.1056081227776378 1.0027360980780262 0.9702777078474268 1.1148850368770735 1.1008499604399862 1.0603317729722022 1.029702731314221 1.0824099813400594 0.997977737409248 0.9177302016612255 1.0 13.887491471289746 -8.778187575443614 24.855086382833875 0.9990450331533043 1.0559729166771077 0.3495138613518547 0.04875566503888785 218.10937662143826 323682.92951045354 0.0074012307891298335 0.007889499232661775 1.666527269927112e-09 8.778187575443614 0.0569278835238034 SNEEEET(ph)SDSSLEK ddPTM_A549_MK2206_60min_R1 1 SNEEEETSDSSLEK 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 S(0.001)NEEEET(0.557)S(0.421)DS(0.011)S(0.011)LEK 55.213 0.017415 2664700.0 646.38 812.29 1010.0 727.91 962.95 448.19 804.1 677.74 1313.6 1183.2 1310.2 True False 755.473141526258 853.6320914288901 1153.2331872561792 906.2479826771212 821.3013306121516 495.617168315556 950.1945615610099 773.811720491701 1016.071697388154 915.9142982319121 984.8411803195678 0.7671014947619443 0.8667713215971513 1.1709839213688957 0.9201970843492306 0.8339429209749842 0.5032457803548942 0.9648200954114088 0.7857223438205634 1.031711221761109 0.9300121852487019 1.0 9.94374727795849 -8.773871258248045 24.891843594805778 1.0149747593086647 0.8566105338362722 0.12609605575574734 0.15398551200837365 271.1732820032668 542957.4164250084 0.026883683072031157 0.028718277813051276 1.6831729449560009e-09 8.773871258248045 -0.15836422547239248 SNEEEET(ph)SDSSLEK ddPTM_A549_PD325901_60min_R1 1 SNEEEETSDSSLEK 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 SNEEEET(0.617)S(0.381)DS(0.002)SLEK 120.3 2.4594e-06 3162800.0 1090.7 1448.5 1223.3 1278.5 1250.4 1693.5 1403.5 1692.4 1499.4 1174.0 1658.5 True False 1201.4270610690976 1570.5701785111924 1306.3204943004873 1357.4700413158298 1162.5762176458213 1679.7086974781357 1456.9109605246697 1658.6437543378847 1436.3854323039543 1099.8734396439065 1454.5150140977166 0.8259983908205871 1.0797895953555823 0.8981141353916108 0.9332801849129849 0.7992878769745841 1.1548238974488099 1.0016472476418123 1.1403414459539256 0.9875356516653019 0.7561788149201017 1.0 10.506322473264296 -7.254519301874114 24.999389494093723 1.0168347541466543 0.9178108123979113 0.14441438268408002 0.11791774527247266 629.6212759253053 2274562.1615545307 0.012482722552775011 0.021319806090978662 5.5651989962265256e-08 7.254519301874114 -0.09902394174874296 SNEEEETS(ph)DSSLEK ddPTM_A549_PD325901_60min_R1 1 SNEEEETSDSSLEK 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 SNEEEET(0.241)S(0.737)DS(0.018)S(0.004)LEK 96.67299999999999 4.5368e-05 3330700.0 1334.2 1252.8 1230.4 1484.4 1527.5 1156.8 1501.4 1283.8 1255.2 1412.6 1619.5 True False 1469.6470018138716 1358.3778527019815 1313.902342996256 1576.0880166830004 1420.2136695889255 1147.3794043358175 1558.5365985976048 1258.1936018783829 1202.4483090755793 1323.4081949241765 1420.3117668563475 1.0347354968879265 0.9563941413430322 0.9250802349574184 1.109677504236581 0.9999309325813451 0.8078363012336187 1.0973200637823326 0.8858573386765713 0.8466087074227533 0.9317730274482955 1.0 10.47199192927146 -7.04867235562393 24.988183611691372 0.9280588451650458 1.0042968065206386 0.17285827565329348 0.08383358681660824 578.4794420386721 296987.99930021854 0.013145859775092073 0.022769654473928147 8.939796736284806e-08 7.04867235562393 0.0762379613555928 SNEEGS(ph)EEKGPEVR ddPTM_A549_MK2206_60min_R1 2 SNEEGSEEKGPEVR 14 1 P31947-2;P31947 P31947-2 SFN 14-3-3 protein sigma 1 S(0.054)NEEGS(0.946)EEKGPEVR;S(0.006)NEEGS(0.994)EEKGPEVR 80.609 0.00014044 18041500.0 2012.96 1887.56 1608.1599999999999 1508.2399999999998 2556.66 1652.48 1582.4499999999998 1782.7 2436.0699999999997 2530.4 2419.6 True False 2352.698435853052 1983.6287415793822 1836.2212697206896 1877.7588677074668 2180.578700787022 1827.3443367725517 1869.9606814354195 2035.40318428978 1884.3040346044172 1958.7808825608756 1818.7465424372044 1.2935823551864063 1.0906570515984202 1.0096081157411128 1.032446701007158 1.1989458948276246 1.004727318587133 1.0281590303009378 1.1191241532546068 1.0360454250427675 1.076994972557319 1.0 10.828728790022698 -5.282116868082523 2.913826904949158 1.03692968383471 1.3314617252226737 0.554403495100029 0.058786434754934724 0.18746914694315855 2.31222448957464 0.008102737610328392 0.1259771495798563 5.222556317740709e-06 5.282116868082523 0.29453204138796374 SNEEGS(ph)EEKGPEVR ddPTM_A549_PD325901_60min_R1 2 SNEEGSEEKGPEVR 14 1 P31947-2;P31947 P31947-2 SFN 14-3-3 protein sigma 1 S(0.001)NEEGS(0.999)EEKGPEVR;SNEEGS(1)EEKGPEVR 104.03 6.7534000000000004e-06 26205000.0 3365.9 3115.5 3115.0 3993.7999999999997 4143.0 2989.3 3283.9 3700.3 3264.0 3576.0 3538.8 True False 3707.6036901553816 3378.0541188481993 3326.402632016689 4240.487955422102 3852.0099725740893 2964.956131899257 3408.870611519033 3626.4946136708086 3126.8254308657515 3350.2107497160227 3103.550034301479 1.1946331295380124 1.0884484160116024 1.0718057048387066 1.3663346517874053 1.2411625171176166 0.9553434290182418 1.098377849186592 1.168498839583564 1.0074996041007958 1.079476957899298 1.0 11.599703689371806 -8.256177352691537 0.7026396143671813 0.9983023136123514 1.1731438945867014 0.19475976113433202 0.10219435662655686 0.5533755637630663 0.5582525627847654 0.02443540031412918 0.03360899297008731 5.543992668820114e-09 8.256177352691537 0.17484158097434999 SNEEGSEEKGPEVR ddPTM_A549_MK2206_60min_R1 2 SNEEGSEEKGPEVR 14 1 P31947-2;P31947 P31947-2 SFN 14-3-3 protein sigma 0 ; 68.972 0.0030677 5869600.0 2439.42 2646.3 2740.1000000000004 2310.55 2851.35 2051.07 2125.48 2004.3 3109.9 3843.0 3635.2 False True 2851.1344579070874 2780.9853667388174 3128.6873825749067 2876.6348537245312 2431.920192160506 2268.1128660099243 2511.652203341245 2288.415662911318 2405.512615489816 2974.8636309205845 2732.4795135839504 1.043423909944528 1.0177515889556465 1.144999392317963 1.0527562382165878 0.8900049131459992 0.8300566773637188 0.9191842759863674 0.8374868508747965 0.8803405857322308 1.0887048250981104 1.0 11.415994964178065 -6.716424146904173 7.0794592776021465 0.920464085656737 1.0681319777369143 0.4617465191453902 0.07475002292548312 0.13419838686513041 16.469240015227065 0.009829850005515676 0.020417859496878958 1.9212144883290824e-07 6.716424146904173 0.14766789208017728 SNES(ph)VDIQDQEEK ddPTM_A549_MK2206_60min_R1 2 SNESVDIQDQEEK 13 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.012)NES(0.988)VDIQDQEEK;SNES(1)VDIQDQEEK 225.7 3.9882e-46 24167000.0 4864.3 6622.2 5337.7 4665.1 8095.9 5887.2 4824.7 6639.1 7470.4 8436.4 7755.1 True False 5685.274919283047 6959.241694296859 6094.666122393373 5808.049709424296 6905.003834573877 6510.179596392917 5701.285538071642 7580.212756391028 5778.366327777459 6530.611380665733 5829.294640128442 0.9752937997242457 1.1938394135012398 1.0455237723682955 0.9963554886112813 1.1845350528416132 1.1168040043090828 0.9780403788177742 1.3003653485293731 0.9912633833945542 1.1203090225890244 1.0 12.509105608781933 SNES(ph)VDIQDQEEK ddPTM_A549_PD325901_60min_R1 2 SNESVDIQDQEEK 13 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.004)NES(0.996)VDIQDQEEK;SNES(1)VDIQDQEEK 218.12 6.712899999999999e-38 40267000.0 7325.0 5947.0 5222.3 5342.6 8045.3 6784.6 7995.5 7404.5 7430.4 6723.0 7115.4 True False 8068.628607620003 6448.174560998313 5576.716682241011 5672.600268075052 7480.225882778255 6729.348467026961 8299.773127805478 7256.811438782119 7118.126127912038 6298.508632645643 6240.250908236897 1.292997465369496 1.033319758423009 0.8936686624058584 0.9090340038390816 1.198705948330481 1.0783778674899873 1.3300383670230453 1.1629037911285587 1.1406794746852853 1.0093357983942357 1.0 12.607388322850838 -5.2540638498747 24.09600432137445 1.076923505361702 1.2929976386715891 0.20700631237268108 0.12229379080596732 702.133431876006 2293786.4330669474 0.017558870837833602 0.24644612752089798 5.571038376328943e-06 5.2540638498747 0.21607413330988723 SNETQNPHKPS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 SNETQNPHKPSPSR 14 1 A0A5S6SZ32;Q96LW4-2;Q96LW4 A0A5S6SZ32 PRIMPOL DNA-directed primase/polymerase protein 1 SNETQNPHKPS(0.813)PS(0.186)R 47.754 0.013082 4114200.0 544.01 532.64 388.63 288.29 656.8 358.59 398.49 585.52 695.15 797.68 864.43 True False 635.8255882324629 559.7491009106157 443.7435777855139 358.92106294182986 560.1855900576986 396.5357557872224 470.89047486189173 668.5192530797959 537.6996349264433 617.4835339871797 649.7681739456906 0.9785422150971755 0.8614597072546077 0.6829259966533898 0.5523832611903664 0.8621314686067103 0.610272665986817 0.7247053545304145 1.0288581064539375 0.8275253490199194 0.950313602215289 1.0 9.343781271061104 -9.63060107466556 0.48683823001363563 0.9955691842065688 0.7575274205301129 0.24582151332133917 0.13475281065159736 0.9459880295975045 0.4905817931639911 0.09324578266806444 0.04244219319587851 2.3409865868910916e-10 9.63060107466556 -0.2380417636764559 SNETQNPHKPS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 SNETQNPHKPSPSR 14 1 A0A5S6SZ32;Q96LW4-2;Q96LW4 A0A5S6SZ32 PRIMPOL DNA-directed primase/polymerase protein 1 SNET(0.005)QNPHKPS(0.879)PS(0.116)R;SNET(0.002)QNPHKPS(0.976)PS(0.021)R 98.796 1.5751e-05 18365500.0 2675.6 2242.0 2072.8 2044.38 2821.0 2642.0 2006.4299999999998 3138.7 2575.7 2310.6 3285.5 True False 2947.2249423273843 2430.941208299683 2213.472672758971 2170.656709476147 2622.8626919216745 2620.4844279523095 2082.785791610624 3076.096166237481 2467.4522862380277 2164.708321670537 2881.4043285004836 1.0228432411154025 0.8436654253118211 0.7681923188860093 0.7533329106247932 0.9102723508736599 0.9094469672418518 0.7228370454675238 1.0675683852527276 0.8563367042355068 0.7512685048255884 1.0 11.49255640326251 -11.901825618017693 0.30628680013390325 1.1377457995594709 0.8521067884920591 0.0 0.12522407324529178 9.096608962676406 0.6017666885866987 0.9759391998376629 0.04040073627569008 1.2536444489394218e-12 11.901825618017693 -0.28563901106741174 SNFAEALAAHK ddPTM_A549_PD325901_60min_R1 1 SNFAEALAAHK 11 0 H7BZ94;P07237;I3L0S0;I3L312;I3NI03;I3L3U6;I3L514;I3L1Y5;I3L3P5 H7BZ94 P4HB Protein disulfide-isomerase 0 71.241 0.0028114999999999998 3589700.0 1944.8 1846.4 2121.1 2554.0 2538.3 2654.9 2375.1 2459.5 2650.9 2381.2 2550.1 False True 2142.2346643139094 2002.0026079413637 2265.0506012104656 2711.754779445152 2360.01856465962 2633.279374629291 2465.4857302045884 2410.443343059576 2539.4918917530717 2230.8506256218648 2236.4538664157913 0.9578711622373501 0.8951683010344559 1.0127866419352993 1.2125243539188637 1.0552502781744644 1.1774351414855986 1.10240849016745 1.0777970336238705 1.13549934111672 0.997494586909183 1.0 11.126997283389299 -5.989749149250753 7.341632190317898 1.0854099627752438 0.9322585944601121 0.5064285456874598 0.06428906836416687 0.09433462431822125 29.500866425433575 0.009511978184230234 0.028780091777700256 1.0238842223622495e-06 5.989749149250753 -0.15315136831513176 SNGDLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SNGDLSPK 8 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 S(0.187)NGDLS(0.813)PK;S(0.014)NGDLS(0.986)PK 77.358 0.0044817 126820000.0 16187.2 18326.3 17163.8 14288.5 24924.0 20828.1 17460.4 19702.8 26012.0 20479.9 21587.0 True False 18919.20362095647 19259.03039204382 19597.884930126344 17789.183141435136 21257.712616623143 23032.115717426157 20632.728668921605 22495.732237294378 20120.32353262841 15853.47636609173 16226.352129108913 1.1659554452178302 1.1868983391217365 1.207781316107959 1.0963143779878053 1.3100734193046588 1.41942659287593 1.271556817253335 1.386370273386256 1.2399782386414497 0.9770203579923383 1.0 13.98605108142146 -10.385168700594726 0.8872907744643087 1.0090965717887939 1.2543374841976243 0.5507458112918537 0.09110666987922872 0.36832488166928234 0.5500542294301979 0.052969892097219376 0.018465173659414084 4.119374719437191e-11 10.385168700594726 0.2452409124088304 SNGELSES(ph)PGAGK ddPTM_A549_MK2206_60min_R1 2 SNGELSESPGAGK 13 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;A0A0A0MR81;F5H176 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 SNGELS(0.032)ES(0.968)PGAGK;SNGELS(0.028)ES(0.971)PGAGK 110.12 5.6463000000000005e-05 105983000.0 21032.8 24098.0 22047.0 20926.1 28528.0 21155.0 20858.0 21194.0 31084.0 32873.0 31684.0 True False 24582.622437410624 25324.485269119905 25173.596118254434 26052.995439408325 24331.568990813073 23393.6080584475 24647.62860967484 24198.314403902834 24043.523630948082 25446.96646870997 23815.988366085465 1.032189891074051 1.0633396724858404 1.0570040483435168 1.0939287943434004 1.0216485084222584 0.9822648423762481 1.0349194092139233 1.0160533349252812 1.0095538871351917 1.068482486536106 1.0 14.53964280149354 -6.945383582224062 7.839659583044706 1.0065308236921748 1.0612098716189748 0.3398772743518086 0.02578235602544862 0.10347466831763479 12.91823870442021 0.0024459656871970597 0.004631971738248801 1.1340087818411908e-07 6.945383582224062 0.054679047926800006 SNGELSES(ph)PGAGK ddPTM_A549_PD325901_60min_R1 2 SNGELSESPGAGK 13 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;A0A0A0MR81;F5H176 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(0.064)NGELS(0.233)ES(0.702)PGAGK;SNGELS(0.029)ES(0.971)PGAGK 93.738 0.00017472 116051000.0 29258.7 28755.5 31386.0 29229.6 36631.9 34221.3 34309.1 34077.3 35594.5 35839.8 36246.4 True False 32229.021684883493 31178.82690243603 33516.042699350175 31035.046006761975 34059.00171719448 33942.613078835835 35614.751575159884 33397.60151837533 34098.58694820802 33576.86891154146 31788.322584860725 1.0138635531600102 0.9808264282961893 1.0543507795945257 0.9763033555454889 1.0714312347331962 1.067769870153548 1.1203721580490538 1.0506248459388994 1.0726765106016498 1.0562642562188083 1.0 14.956209269496512 -5.76581616853066 24.95352970253465 1.0436205908588014 0.9973449871403793 0.21678774641447185 0.03741149875450227 138.68930237604664 790735.2111567804 0.0058721501549114955 0.01921351846307008 1.7146829579537938e-06 5.76581616853066 -0.0462756037184221 SNGREQDLPLAEAVRPKT(ph)PPVVIK ddPTM_A549_MK2206_60min_R1 1 SNGREQDLPLAEAVRPKTPPVVIK 24 3 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 S(0.001)NGREQDLPLAEAVRPKT(0.999)PPVVIK 53.55 0.0013957000000000002 5660700.0 554.72 797.26 1007.5 812.4 1165.0 807.54 742.1 689.12 1404.8 1081.2 1420.2 True False 648.3431743981026 837.8371286272109 1150.3786496639605 1011.4380364700221 993.6300432661686 892.993346798331 876.929964102009 786.8048703414892 1086.6150430046287 836.956169073988 1067.5251444740115 0.6073329305208569 0.784840650324942 1.0776126966365485 0.9474606211438471 0.9307790532238448 0.8365080217743486 0.8214607109175754 0.7370363821539415 1.0178823877165188 0.7840154149121903 1.0 10.060054336129154 -2.0102214106430947 0.16210087204169116 1.0306764616490374 1.741215699895226e-18 0.0 0.13751583135313244 61.834548715749314 0.6110098833576321 0.1850034019525667 15.404771423069741 0.009767391359346697 2.0102214106430947 -1.0306764616490374 SNGREQDLPLAEAVRPKT(ph)PPVVIK ddPTM_A549_PD325901_60min_R1 1 SNGREQDLPLAEAVRPKTPPVVIK 24 3 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 S(0.001)NGREQDLPLAEAVRPKT(0.999)PPVVIK 58.477 0.00040019 5734400.0 1201.1 824.19 959.39 908.16 1113.6 1209.8 1016.5 1066.6 1171.0 1351.0 1107.5 True False 1323.0347877969139 893.6473837950564 1024.4999746807357 964.254980618994 1035.3845777114414 1199.9477899079113 1055.1834637501427 1045.3258262684865 1121.786942262193 1265.6976294368983 971.2845210209363 1.3621495649969237 0.920067564605813 1.0547887385293278 0.9927626352013172 1.0659951387088185 1.235423569446595 1.0863793676450424 1.076230294671765 1.1549519404294228 1.3031172658929009 1.0 9.923750159918656 -5.240786928876507 24.39088236632514 1.0718071364698067 1.3621499592402249 0.3469098838421317 0.10538772495231781 2483.974062665721 2933554.137809944 0.011730158952844986 0.690008454688746 5.743982011137036e-06 5.240786928876507 0.2903428227704181 SNILSDNPDFS(ph)DEADIIK ddPTM_A549_PD325901_60min_R1 2 SNILSDNPDFSDEADIIK 18 0 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 SNILSDNPDFS(1)DEADIIK;SNILSDNPDFS(1)DEADIIK 157.42 1.291e-22 2117000.0 1045.8 1359.3 1014.4 1281.4 1725.6 1162.8 1182.3 1200.6 1028.5 930.91 1279.9 True False 1151.9688461227313 1473.8529814637639 1083.2432840827378 1360.5491677294508 1604.3998089968245 1153.330542325111 1227.2930734793847 1176.6530911475206 985.2757217050937 872.1321837299055 1122.480413954578 1.0262707765779748 1.313032248171953 0.9650442632369817 1.2120916773381727 1.4293343465516788 1.0274838901302927 1.0933759362050197 1.0482615790168566 0.8777665155277834 0.7769687318260834 1.0 10.132474556410582 -8.11689640430306 1.5044411174244716 0.9443000255459152 1.1769093755208493 0.40558388080023056 0.13788868737122698 0.28973464272081517 1.2929237164642615 0.022263500981516943 0.03051139314669672 7.640180091001427e-09 8.11689640430306 0.2326093499749341 SNINGPGT(ph)PRPLNRPK ddPTM_A549_MK2206_60min_R1 2 SNINGPGTPRPLNRPK 16 2 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 SNINGPGT(1)PRPLNRPK;SNINGPGT(1)PRPLNRPK 122.49 2.4093e-08 101379000.0 4066.5 4336.1 3986.1 4347.4 5654.7 4399.3 3695.7 4531.5 6493.0 6744.6 6406.299999999999 True False 4752.825783620359 4556.788969019455 4551.388918536492 5412.513195162203 4822.901120735792 4864.8310059810065 4367.160852084348 5173.854002136728 5022.345867190382 5220.9901756718655 4815.438905114675 0.9869974216830345 0.9462873600534112 0.9451659564618866 1.1239916655184536 1.0015496439199323 1.010257029907257 0.9069081631262744 1.0744304110350906 1.042967415048282 1.084218962912485 1.0 12.233451583743193 SNINGPGT(ph)PRPLNRPK ddPTM_A549_PD325901_60min_R1 4 SNINGPGTPRPLNRPK 16 2 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 SNINGPGT(1)PRPLNRPK;S(0.009)NINGPGT(0.991)PRPLNRPK;SNINGPGT(1)PRPLNRPK;SNINGPGT(1)PRPLNRPK 118.23 4.6073000000000005e-08 149490600.0 18781.5 18584.0 20095.0 19958.4 22910.4 21392.300000000003 21756.5 23720.9 23489.6 22205.7 24688.1 True False 20688.184053790454 20150.138900553673 21458.76754105148 21191.185039184875 21301.25254058927 21218.088201394472 22584.455513113615 23247.768040813946 22502.41379928438 20803.62831235154 21651.620210760244 0.9555028146812315 0.930652704250725 0.9910929220154655 0.9787343779775637 0.9838179467974941 0.9799769252764595 1.0430838566940028 1.073719556066315 1.039294684658348 0.9608347139773273 1.0 14.402187366744835 -7.645237212425492 5.160280901788854 1.025647874999901 0.9690963718977823 0.43603364210635986 0.030368413306602487 0.14014973776012374 5.822612984378181 0.004322682228333931 0.006443719297497575 2.2634076925590628e-08 7.645237212425492 -0.05655150310211865 SNKKWDGS(ph)EEDEDNSK ddPTM_A549_MK2206_60min_R1 2 SNKKWDGSEEDEDNSK 16 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 S(0.064)NKKWDGS(0.936)EEDEDNSK;S(0.007)NKKWDGS(0.993)EEDEDNSK 58.997 0.001221 6313000.0 1597.69 1897.98 1800.03 1906.9299999999998 2507.01 1552.01 1644.9099999999999 1748.83 2689.13 4187.9 4011.7999999999997 True False 1867.341012229783 1994.5790750719632 2055.301320848256 2374.1279356053406 2138.2321500160665 1716.2426680591404 1943.7688549400834 1996.7320080672564 2080.0463486581975 3241.8504813771333 3015.5593399527115 0.6192353728509503 0.6614292243054455 0.6815655369860791 0.7872927268088746 0.7090665143567021 0.5691291314751756 0.6445798725255941 0.662143165817645 0.6897713207297773 1.075041183380583 1.0 11.55820990938521 -10.48773168097818 0.666172158798073 1.0184956771731881 0.6664695859189111 0.850047939522145 0.0588378928516239 0.25811022591163396 0.1920000063739847 0.049821533245114825 0.011900953482365964 3.252882072760117e-11 10.48773168097818 -0.352026091254277 SNKKWDGS(ph)EEDEDNSK ddPTM_A549_PD325901_60min_R1 2 SNKKWDGSEEDEDNSK 16 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 S(0.117)NKKWDGS(0.883)EEDEDNSK;S(0.015)NKKWDGS(0.984)EEDEDNSK 56.54 0.0021098000000000002 9139800.0 1639.41 986.24 1197.39 1580.15 1505.5700000000002 2281.88 2057.08 1432.79 2725.5 1623.4299999999998 1861.5900000000001 True False 1805.8416963301454 1069.3539060095811 1278.6520858909996 1677.752276718974 1399.823957134532 2263.297125834902 2135.363305077367 1404.2118794479893 2610.9567131815593 1520.9263527437029 1632.6262315913 1.106096215647604 0.6549900309805113 0.7831872728424275 1.027640156855553 0.857406263630924 1.386292270723162 1.307931517795139 0.8600939102144168 1.5992372673301305 0.931582699894069 1.0 10.672978827214955 -7.251439980761534 24.282624873932257 1.2628593611454257 0.875209817244468 0.2449918759723323 0.23457931377261354 422.3986744146332 1025755.2055536577 0.03823331765774327 0.06568484083147466 5.6047986999597467e-08 7.251439980761534 -0.38764954390095774 SNLDEEVNVIPPHT(ph)PVR ddPTM_A549_MK2206_60min_R1 4 SNLDEEVNVIPPHTPVR 17 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR 142.93 2.8374e-16 88425800.0 10619.33 11989.95 11106.24 9681.84 15614.01 12966.09 10614.519999999999 11905.59 16467.6 17143.8 17115.3 True False 12411.613286308419 12600.187241782898 12681.271835279273 12053.891234634317 13317.20981275397 14338.153037606038 12543.040887427649 13593.243841840229 12737.71489335351 13271.003673113792 12865.098651750497 0.9647507277077604 0.9794085209030594 0.9857112003998343 0.9369451071402548 1.0351424558211184 1.1145000458783973 0.9749665530719404 1.0565984925417309 0.9900985012361601 1.031550867377769 1.0 13.651174899492949 -6.7672024049624255 24.999691984987162 1.0098357827859963 0.9689690277855542 0.2952896628786381 0.03975848881373078 186.00823566617643 806897.5708205084 0.005900911161437538 0.01137298117134062 1.709218540187183e-07 6.7672024049624255 -0.04086675500044212 SNLDTEVT(ph)TAKESPEIEPLPFTLAHER ddPTM_A549_PD325901_60min_R1 1 SNLDTEVTTAKESPEIEPLPFTLAHER 27 1 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 S(0.001)NLDT(0.003)EVT(0.451)T(0.093)AKES(0.451)PEIEPLPFTLAHER 74.05 4.5048000000000005e-06 1252500.0 601.2 762.35 570.89 533.0 766.6 419.56 521.78 770.36 615.28 864.86 721.75 True False 662.2333814199519 826.5959099675572 609.634028440452 565.9221994691727 712.756660626429 416.1432424646748 541.6366234289719 754.9945654642714 589.4219212938356 810.2525920020687 632.9793255502127 1.0462164476609253 1.305881371795271 0.96311838923101 0.8940611116757232 1.1260346615695078 0.6574357576417608 0.8556940196398329 1.1927633889274312 0.9311866873084438 1.2800617007479076 1.0 9.306014568712257 -5.788536001974519 23.06911818213625 0.9592444213760085 1.1760486640171262 0.13098619414297374 0.17255040253599352 75.20096645179815 64023.774830459486 0.018443557137247442 0.05737686430299298 1.627286411896632e-06 5.788536001974519 0.21680424264111764 SNLDTEVTTAKES(ph)PEIEPLPFTLAHER ddPTM_A549_PD325901_60min_R1 1 SNLDTEVTTAKESPEIEPLPFTLAHER 27 1 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 SNLDT(0.001)EVT(0.026)T(0.156)AKES(0.818)PEIEPLPFTLAHER 84.516 6.0597e-07 2410300.0 568.25 585.69 473.05 689.7 657.25 656.31 355.14 581.84 453.64 505.57 499.4 True False 625.9383216764602 635.048151779234 505.15401768073644 732.3012025776517 611.0870273894084 650.9652289588873 368.6550470400646 570.2347447553504 434.5750883755942 473.64822391888396 437.9769659574316 1.4291580843940939 1.4499578771020492 1.1533803303478611 1.6720084833155962 1.3952492365746967 1.4863001471683712 0.8417224550477738 1.3019742796491571 0.9922327477327471 1.081445511371754 1.0 8.774711187517125 -7.751642271747263 24.999236324984018 1.0134830420038692 1.4285799788314186 0.6110090243941061 0.15311122697590704 90.57797494885938 231126.66768657204 0.021616339420172936 0.03184294901091474 1.771567597267658e-08 7.751642271747263 0.41509693682754945 SNMS(ph)PDKPVSVK ddPTM_A549_MK2206_60min_R1 4 SNMSPDKPVSVK 12 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-8;Q9Y6M7-3;Q9Y6M7-5;H7C3C4 Q9Y6M7-13 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 S(0.008)NMS(0.992)PDKPVSVK;S(0.009)NMS(0.991)PDKPVSVK;S(0.153)NMS(0.847)PDKPVSVK;S(0.139)NMS(0.861)PDKPVSVK 75.911 0.00027331 211885800.0 8797.7 8868.8 7931.290000000001 7594.370000000001 10762.800000000001 8516.2 8374.9 8229.5 12169.3 10989.9 11242.699999999999 True False 10282.536676885986 9320.18403829241 9056.066183913927 9454.990990924227 9179.606377394943 9417.378631403957 9896.510923538492 9396.056826786757 9412.972980378865 8507.273957182962 8450.827307265154 1.216749118520753 1.1028723815335655 1.0716188906296134 1.1188243052601248 1.0862376006078434 1.1143735742070913 1.171070069675958 1.1118505307414093 1.1138522464287677 1.006679422956529 1.0 13.044876867910693 -10.511170277951681 0.6484395512309119 0.9916001536178539 1.1221852339297462 0.595057948719626 0.03802079626862333 0.48945460847293387 0.337764872285888 0.034805040347421136 0.007893791743875117 3.081979332494613e-11 10.511170277951681 0.1305850803118923 SNMS(ph)PDKPVSVK ddPTM_A549_PD325901_60min_R1 6 SNMSPDKPVSVK 12 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-8;Q9Y6M7-3;Q9Y6M7-5;H7C3C4 Q9Y6M7-13 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 S(0.003)NMS(0.997)PDKPVSVK;S(0.021)NMS(0.979)PDKPVSVK;S(0.031)NMS(0.969)PDKPVSVK;S(0.014)NMS(0.986)PDKPVSVK;S(0.038)NMS(0.961)PDKPVSVK;S(0.011)NMS(0.987)PDKPVS(0.001)VK 101.39 5.1816999999999995e-05 438694700.0 26642.700000000004 27557.0 29029.800000000003 28019.300000000003 33161.9 30114.399999999994 31217.700000000004 32004.8 29173.4 31720.0 32994.3 True False 29347.44729068089 29879.325101299924 30999.93679836856 29749.988524552697 30832.72254634433 29869.158310797477 32405.706656480936 31366.439156720124 27947.343451231307 29717.193786630938 28936.210268100276 1.014211848019157 1.0325928939713074 1.0713198622469013 1.028123180226871 1.0655411424188743 1.032241542138837 1.1199015474464356 1.083985735039359 0.9658259734876509 1.026989834235191 1.0 14.820588366193352 -8.766013140447505 24.998752196045267 0.9838622625273853 1.0564491152542241 0.3785708264898202 0.03201630360441564 63.92110211657482 349372.3726657431 0.005335360581745326 0.005773510127611266 1.713905449089217e-09 8.766013140447505 0.07258685272683885 SNMS(ph)PHGLPAR ddPTM_A549_MK2206_60min_R1 4 SNMSPHGLPAR 11 0 H0Y4T7;E7ESY4;Q13330-3;Q13330 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 S(0.028)NMS(0.972)PHGLPAR;S(0.002)NMS(0.998)PHGLPAR;S(0.005)NMS(0.995)PHGLPAR;S(0.013)NMS(0.987)PHGLPAR 95.98100000000001 6.9095e-05 84012600.0 5505.53 5286.259999999999 5260.18 4981.7 7235.0 5374.57 5457.4800000000005 5896.52 7422.599999999999 8092.799999999999 9647.3 True False 6434.728866714718 5555.308054557963 6006.152620733867 6202.216723637014 6170.741084146544 5943.303430049169 6449.033473234651 6732.369767335155 5741.392951456546 6264.630859306296 7251.609158065153 0.8873518589399002 0.7660793533500653 0.8282510115777401 0.8552883351054549 0.8509478309767315 0.8195840813399462 0.8893244702883791 0.9283966662554468 0.7917405401077136 0.8638952710708144 1.0 12.824085454515764 -10.918879663961208 1.0177176585696956 1.0058498686087012 0.8421509524131865 0.09777953363567204 0.05875408895733213 0.30403115961188215 0.5249759828890374 0.037953688941193414 0.0077479347513719 1.2053698827759368e-11 10.918879663961208 -0.1636989161955147 SNMS(ph)PHGLPAR ddPTM_A549_PD325901_60min_R1 4 SNMSPHGLPAR 11 0 H0Y4T7;E7ESY4;Q13330-3;Q13330 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 S(0.008)NMS(0.992)PHGLPAR;S(0.066)NMS(0.934)PHGLPAR;SNMS(1)PHGLPAR;S(0.002)NMS(0.998)PHGLPAR 95.98100000000001 8.7062e-05 133840000.0 9027.2 8684.8 9985.0 8965.6 11546.9 10109.199999999999 8821.5 11292.4 9730.9 9396.6 11676.7 True False 9943.6346985266 9416.698575308246 10662.642144682713 9519.384749645053 10735.885578642468 10026.874026894573 9157.207009810021 11067.164223283577 9321.944113116288 8803.297072366217 10240.539924699915 0.9710068777274928 0.9195509850604083 1.041218746578459 0.9295784030571029 1.0483710485565114 0.9791352898014698 0.8942113479508124 1.0807207729926296 0.9102981074886493 0.8596516528521014 1.0 13.322004161894391 SNMSPDKPVS(ph)VK ddPTM_A549_MK2206_60min_R1 1 SNMSPDKPVSVK 12 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-8;Q9Y6M7-3;Q9Y6M7-5;H7C3C4 Q9Y6M7-13 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 S(0.007)NMS(0.005)PDKPVS(0.988)VK 53.403 0.0051846 5813100.0 1339.5 1976.6 1539.8 1256.0 1964.7 1243.3 1369.4 1712.1 2129.9 1951.5 2464.3 True False 1565.5748523692293 2077.2004972587943 1758.1667937990749 1563.7200563839835 1675.6952326223516 1374.8651807642539 1618.2022541992885 1954.7954180863471 1647.4810507513928 1510.654794624388 1852.3462987799658 0.8451847548163017 1.1213888561911598 0.9491566425549469 0.8441834323387135 0.9046338871549212 0.7422290214685011 0.8735959659730502 1.055307757180101 0.8894022957999236 0.8155358399341255 1.0 10.855138122368668 -10.976229209805231 0.8337992314864915 1.0098784604410311 0.9137722724733058 0.0 0.11237655088647824 1.7542783335254326 1.7684875364266506 0.11877044881958075 0.01803049374875099 1.0562598944279933e-11 10.976229209805231 -0.0961061879677253 SNMSPDKPVS(ph)VK ddPTM_A549_PD325901_60min_R1 2 SNMSPDKPVSVK 12 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-8;Q9Y6M7-3;Q9Y6M7-5;H7C3C4 Q9Y6M7-13 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 S(0.016)NMS(0.08)PDKPVS(0.905)VK;SNMS(0.012)PDKPVS(0.988)VK 76.391 0.00026408 18675500.0 5714.8 5687.700000000001 5694.7 6122.4 8252.1 6379.5 7460.4 7425.8 6488.9 7664.599999999999 7786.2 True False 6294.962288986595 6167.022439984889 6081.176587012979 6500.56674302075 7672.500964199527 6327.547467116487 7744.309604487524 7277.686593572594 6216.194098757589 7180.655847951178 6828.546760788449 0.9218597323129051 0.9031237034793069 0.8905520896382972 0.951969279957039 1.123592066214925 0.9266316375617649 1.1341080138687278 1.065773853283577 0.9103246000236578 1.0515642785350237 1.0 12.737362864043744 -6.519171144773742 24.986072901868603 0.9877450776800609 0.9076876239982103 0.26415577715166316 0.07412039604641608 207.45938545534318 1398095.8598375868 0.011283202586517663 0.02390575762889431 3.0257208309689763e-07 6.519171144773742 -0.08005745368185058 SNNWS(ph)LEDVTASDK ddPTM_A549_PD325901_60min_R1 1 SNNWSLEDVTASDK 14 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 SNNWS(1)LEDVTASDK 220.97 2.4525999999999994e-90 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SNPAT(ph)PTSK ddPTM_A549_MK2206_60min_R1 2 SNPATPTSK 9 0 K7EM84;L7N2F3;Q32NC0-2;Q32NC0 K7EM84 C18orf21 UPF0711 protein C18orf21 1 SNPAT(0.974)PT(0.022)S(0.004)K;S(0.002)NPAT(0.888)PT(0.099)S(0.011)K 79.82 0.0039889 2546000.0 925.29 1050.6 1233.1 952.09 1170.8 897.79 802.18 997.25 1428.1 1344.4 1580.3 True False 1081.4563308314482 1104.071052524582 1407.9721219857379 1185.3520927409443 998.5768709493814 992.7935418952301 947.9257224138926 1138.6132414500382 1104.6376302070828 1040.69910627365 1187.8678959387983 0.9104180140980654 0.9294560921288392 1.1852935219475618 0.9978820850311257 0.8406464004654187 0.8357777369768912 0.7980060119940575 0.9585352422965914 0.9299330624084787 0.8761067706532825 1.0 10.214158686060687 -6.544971276644039 24.93709790931593 0.934602563400016 1.0156779153609123 0.17832938805184095 0.09186412307026974 365.615539282158 412690.00957798737 0.014151010970644888 0.02945954964108311 2.851206834303784e-07 6.544971276644039 0.08107535196089632 SNPAT(ph)PTSK ddPTM_A549_PD325901_60min_R1 2 SNPATPTSK 9 0 K7EM84;L7N2F3;Q32NC0-2;Q32NC0 K7EM84 C18orf21 UPF0711 protein C18orf21 1 SNPAT(0.946)PT(0.043)S(0.011)K;S(0.007)NPAT(0.825)PT(0.151)S(0.017)K 83.182 0.0015405 15800200.0 6797.5 7314.7 6825.1 6960.700000000001 8264.099999999999 7101.6 6989.1 6868.9 7209.8 8459.5 7980.6 True False 7487.577195944979 7931.135439941886 7288.292328660386 7390.646630103321 7683.6581255972715 7043.766924127979 7255.074025082273 6731.894400952193 6906.797178754876 7925.365726292702 6999.036793191588 1.0698010908056128 1.1331752745830699 1.0413279061127634 1.0559519614602793 1.097816507133047 1.006390898098993 1.0365817811016151 0.9618315490926892 0.9868210987937026 1.132350916343548 1.0 12.772940676819589 -7.484075348408845 1.4630240874460365 0.9920338423065138 1.0808635037316727 0.13258554521573895 0.050830198848391836 0.1672277927814417 0.7121645981597444 0.004348738858367174 0.007757712267443517 3.2803837478949074e-08 7.484075348408845 0.08882966142515891 SNPKS(ph)PQKPIVR ddPTM_A549_MK2206_60min_R1 2 SNPKSPQKPIVR 12 2 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8YES9;H7C5K3;A0A2R8Y467 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.042)NPKS(0.958)PQKPIVR;S(0.04)NPKS(0.96)PQKPIVR 73.296 0.00029688 148729000.0 10901.5 11837.8 12388.3 10773.7 15581.0 12625.7 10334.400000000001 11402.8 15367.9 16073.0 14774.7 True False 12741.40668391427 12440.29345666808 14145.147221471016 13413.256983649764 13289.055540025896 13961.743193738641 12212.026709359665 13019.181819610421 11887.095187493465 12442.098136816694 11105.73422902421 1.1472817934554316 1.1201684823463607 1.2736796081886663 1.2077775955231282 1.19659405366425 1.2571652540766203 1.0996145286319046 1.172293659394939 1.0703565331526854 1.120330982196564 1.0 13.439017155915282 -8.859777072983489 0.8279964681477976 1.0159226656428406 1.197905885637244 0.42990158292176994 0.058452778568358704 0.20947573594697025 0.29687457285402435 0.012496803502811026 0.01221941077493394 1.3810930093624702e-09 8.859777072983489 0.18198321999440337 SNPKS(ph)PQKPIVR ddPTM_A549_PD325901_60min_R1 3 SNPKSPQKPIVR 12 2 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8YES9;H7C5K3;A0A2R8Y467 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.008)NPKS(0.992)PQKPIVR;S(0.029)NPKS(0.971)PQKPIVR;S(0.006)NPKS(0.994)PQKPIVR 84.759 9.3152e-05 172085000.0 14008.900000000001 14324.0 15102.9 14203.6 18290.2 17337.7 17039.1 20807.4 22064.5 23379.9 24800.2 True False 15431.073215192897 15531.133750082376 16127.87361511553 15080.924113283945 17005.559449764558 17196.507519496125 17687.53227465328 20392.38008391047 21137.20579636562 21903.689123961318 21749.93262142068 0.7094768284475245 0.714077327061986 0.7415137276899791 0.6933779692922505 0.7818672244076944 0.790646473201482 0.8132223939504761 0.937583598021209 0.971828564450282 1.007069286384327 1.0 14.408723311228387 -8.060946062748334 0.8990249910509583 0.9933351336409334 0.7182794756507209 0.9662469720157876 0.021487018229072688 0.05798100372062465 0.09346042974038303 0.004139854276568471 0.006149218899226837 8.690683566257157e-09 8.060946062748334 -0.2750556579902125 SNPTPMEPTS(ph)PGEHQQNSK ddPTM_A549_MK2206_60min_R1 2 SNPTPMEPTSPGEHQQNSK 19 0 E7EUR8;A0A1B0GVL4;P78312-4;P78312-6;P78312-2;P78312-5;P78312 E7EUR8 FAM193A Protein FAM193A 1 SNPT(0.001)PMEPT(0.114)S(0.885)PGEHQQNSK;S(0.002)NPT(0.019)PMEPT(0.21)S(0.769)PGEHQQNSK 99.11 1.4436e-07 17101300.0 2187.7 2287.9700000000003 1763.93 1588.53 2649.2 1844.4 1163.7 1815.62 2563.8999999999996 2723.3 3221.4 True False 2556.930275870223 2404.417900289993 2014.0817980166248 1977.7199213118222 2259.5061893740194 2039.573183786368 1375.129226823215 2072.989695103051 1983.180743706981 2108.104638586008 2421.437473882961 1.055955523712115 0.9929712933839767 0.8317711358397745 0.8167544868050615 0.9331259690760165 0.8422985130876642 0.5678978877856754 0.8560987915078611 0.8190096854026127 0.8706004847630859 1.0 11.241648034955077 -5.613159645015429 4.459333182364298 0.8718659022650759 1.042758948773523 0.28349471391983583 0.10513197230803893 0.24292098515885496 8.408057167919726 0.016874434650025204 0.07346931893386471 2.4369148529827293e-06 5.613159645015429 0.17089304650844706 SNPTPMEPTS(ph)PGEHQQNSK ddPTM_A549_PD325901_60min_R1 1 SNPTPMEPTSPGEHQQNSK 19 0 E7EUR8;A0A1B0GVL4;P78312-4;P78312-6;P78312-2;P78312-5;P78312 E7EUR8 FAM193A Protein FAM193A 1 SNPT(0.008)PMEPT(0.11)S(0.881)PGEHQQNSK 87.802 1.5971000000000001e-06 16127000.0 1515.8 1822.3 1677.1 2260.0 2109.5 1848.4 1929.3 2364.4 2030.3 2146.7 2303.3 True False 1669.6829001270175 1975.8716163624063 1790.9180912215686 2399.5950671675973 1961.3359973799268 1833.347243235066 2002.7205672534697 2317.2401871640836 1944.9735515584375 2011.156995641885 2020.0087018216889 0.8265721323978754 0.9781500518193418 0.8865892951879261 1.1879132327517148 0.9709542318363036 0.9075937354040665 0.9914415544088357 1.1471436658041843 0.9628540460268399 0.9956179861147028 1.0 10.980145792514383 -4.901037780307215 1.3507690388844753 0.9973619837347616 0.5997081961912255 0.2657738033656305 0.08542106287950209 3.2260620678059424 2.678096925618668 0.011706670309563879 2.218311380852243 1.2559207034212505e-05 4.901037780307215 -0.3976537875435361 SNQNGKDSKPSS(ph)TPR ddPTM_A549_MK2206_60min_R1 2 SNQNGKDSKPSSTPR 15 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 SNQNGKDS(0.002)KPS(0.101)S(0.581)T(0.316)PR;SNQNGKDS(0.005)KPS(0.29)S(0.396)T(0.308)PR 71.592 0.00029603 403460000.0 4340.3 7970.3 8222.7 7680.6 11176.2 6292.299999999999 5651.9 4494.9 12510.2 11750.4 14115.2 True False 5072.836529853053 8375.954226096206 9388.802503813258 9562.347344795236 9532.195785022615 6958.147009509302 6678.7770706214105 5132.065840053925 9676.6596746843 9095.976478992776 10610.006280298252 0.4781181458179546 0.7894391393197888 0.8849007489512376 0.9012574632073106 0.8984156590673253 0.6558098860346485 0.6294790873991516 0.4837005468680703 0.9120314747271088 0.8573017054554546 1.0 13.373137889765601 -8.973269503329679 21.3775668456551 0.9611913561166369 0.7286996121945128 0.27740875874837345 0.1467651935749859 30.382415621317072 24298.911005443388 0.026612910420550126 0.027755094952437005 1.0634828644977593e-09 8.973269503329679 -0.23249174392212402 SNQNGKDSKPSS(ph)TPR ddPTM_A549_PD325901_60min_R1 3 SNQNGKDSKPSSTPR 15 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 SNQNGKDS(0.005)KPS(0.042)S(0.476)T(0.476)PR;SNQNGKDS(0.01)KPS(0.1)S(0.511)T(0.378)PR;SNQNGKDS(0.002)KPS(0.13)S(0.737)T(0.13)PR 66.893 0.00065565 74460000.0 5354.27 4869.46 5798.3 7206.99 6026.51 12967.099999999999 9628.5 10385.3 9095.8 8321.720000000001 8750.3 True False 5897.8315487947575 5279.82648357136 6191.80750601039 7652.1494040381485 5603.228727930837 12861.500236828306 9994.917836417373 10178.157044389753 8713.535157496539 7796.285179006384 7674.068572721892 0.7685403763212495 0.6880087705156737 0.8068480816055879 0.9971437356239352 0.7301509850782378 1.67596889641377 1.3024274857205642 1.3263051988574677 1.135451823882512 1.0159259205369784 1.0 12.90577594106537 SNQNGKDSKPSST(ph)PR ddPTM_A549_PD325901_60min_R1 3 SNQNGKDSKPSSTPR 15 2 P06748;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 SNQNGKDSKPS(0.003)S(0.152)T(0.845)PR;SNQNGKDSKPS(0.041)S(0.176)T(0.783)PR;S(0.001)NQNGKDS(0.013)KPS(0.036)S(0.164)T(0.786)PR 101.49 2.4369e-06 2165040000.0 12512.6 13281.6 14786.3 16221.199999999999 14265.099999999999 27244.5 22351.300000000003 22824.899999999998 20634.1 18597.7 20073.1 True False 13782.869940710723 14400.887043779263 15789.787235245061 17223.146682981867 13263.168587923386 27022.629824885178 23201.890952600676 22369.639463712352 19766.920534015626 17423.438048096672 17604.235953864863 0.7829291755024909 0.8180353343092784 0.8969311293387059 0.9783524106424323 0.7534077947308794 1.5350072502835652 1.3179720502159535 1.270696412064466 1.1228502381937209 0.9897298635259147 1.0 14.103634993317371 SNQSLGWGDSSKPVS(ph)SPDWNK ddPTM_A549_MK2206_60min_R1 1 SNQSLGWGDSSKPVSSPDWNK 21 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 SNQSLGWGDS(0.005)S(0.005)KPVS(0.544)S(0.446)PDWNK 62.236999999999995 0.0004994 9349400.0 1470.8 1535.0 1286.4 1256.8 2158.0 1973.1 1671.2 1511.7 2065.6 1659.6 2461.7 True False 1719.0350823924318 1613.1249434848974 1468.8308634518307 1564.7160564198957 1840.5610586853131 2181.89213236222 1974.835407636812 1725.9881043870887 1597.7448980853937 1284.6952073577413 1850.3919505363149 0.9290113275158753 0.8717747302226166 0.7937944515085612 0.8456133069355283 0.9946871300168851 1.1791513315488773 1.0672524851096703 0.9327689216799883 0.863462953144768 0.6942827474932471 1.0 10.85361517983735 -6.755709709848535 24.922286065761735 0.96621318372808 0.8561535964006409 0.14586944207274766 0.11781273226455558 170.4822023115268 741535.9811465215 0.014696491745554763 0.029945267969559743 1.755053218633843e-07 6.755709709848535 -0.11005958732743903 SNQSLGWGDSSKPVSS(ph)PDWNK ddPTM_A549_MK2206_60min_R1 1 SNQSLGWGDSSKPVSSPDWNK 21 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 SNQSLGWGDSSKPVS(0.119)S(0.881)PDWNK 120.08 2.4903000000000003e-15 8708300.0 2010.0 1552.6 1426.5 764.14 2135.9 2020.2 2033.4 1951.2 2872.4 2290.5 2249.8 True False 2349.238860218106 1631.6207083092186 1628.7991501197423 951.354334303548 1821.7119394096214 2233.9762230997712 2402.8424592440724 2227.7885752993875 2221.8059862802497 1773.0744591786622 1691.1125686788005 1.3891676424908093 0.9648208750431909 0.9631524123744517 0.5625612108405081 1.0772268937914955 1.3210097686430706 1.4208648813492755 1.317350847341801 1.3138131827711854 1.0484662535291163 1.0 10.723756980406081 -6.999334160983945 24.999993939127314 1.1992553323994468 0.9504292580079216 0.24774357839261185 0.2125060447886456 29.363132209586762 1102383.9392347364 0.03319675133776867 0.06234023763426119 1.0015343268695418e-07 6.999334160983945 -0.24882607439152526 SNQSLGWGDSSKPVSS(ph)PDWNK ddPTM_A549_PD325901_60min_R1 1 SNQSLGWGDSSKPVSSPDWNK 21 1 Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 Q8NDV7-2 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 SNQSLGWGDS(0.003)S(0.002)KPVS(0.112)S(0.883)PDWNK 154.86 6.4104e-28 7840200.0 3437.4 2829.8 2695.2 2939.6 3314.9 3138.7 2429.9 2435.9 5192.1 4364.2 7244.9 True False 3786.362317519866 3068.2771771839625 2878.1124795542173 3121.172415684015 3082.0728597841744 3113.1394678326665 2522.3711741923003 2387.314063573418 4973.894093014118 4088.643667200967 6353.823229205034 0.5959187375745738 0.48290250869441537 0.4529733320758934 0.49122745520172806 0.4850737498672577 0.48996318523991583 0.3969847890319557 0.3757287506206101 0.7828190860192427 0.6434934557838686 1.0 12.63340923780811 -8.999763437099721 2.2539752098206707 0.9196155351238794 0.47049735826261524 0.6222203721696054 0.10878188963751018 0.07234313928658723 0.7390937293693779 0.01627548158761064 0.0162911041483803 1.000544854587103e-09 8.999763437099721 -0.44911817686126415 SNRFS(ph)GGFGAR ddPTM_A549_MK2206_60min_R1 2 SNRFSGGFGAR 11 1 O15523-2;O15523 O15523-2 DDX3Y ATP-dependent RNA helicase DDX3Y 1 SNRFS(1)GGFGAR;SNRFS(1)GGFGAR 114.21 6.4678e-06 99261000.0 5497.6 6275.7 5447.0 5176.6 7695.900000000001 6018.7 5432.9 5010.200000000001 7601.200000000001 7922.7 7501.9 True False 6425.4604765846025 6595.106324318028 6219.466505925159 6444.867232386407 6563.843304697082 6655.594839110281 6419.987605403324 5720.41119309399 5879.540336622139 6132.956567445881 5638.971188092937 1.1394738973223324 1.1695584361636806 1.1029434800195426 1.1429154392551557 1.1640143362599678 1.180285306859523 1.138503353051272 1.0144423516780896 1.0426618864514114 1.0876020399600599 1.0 12.46121625628838 -8.237900420259214 5.706401210017689 1.020169490881707 1.149444721579116 0.766463806172764 0.02929302222955511 0.0452772643095985 4.9844896307797635 0.0039020012060437463 0.004972941444122147 5.78228614723993e-09 8.237900420259214 0.12927523069740898 SNRFS(ph)GGFGAR ddPTM_A549_PD325901_60min_R1 1 SNRFSGGFGAR 11 1 O15523-2;O15523 O15523-2 DDX3Y ATP-dependent RNA helicase DDX3Y 1 S(0.366)NRFS(0.634)GGFGAR 106.14 4.5316000000000005e-05 85832000.0 2289.2 2719.0 2131.6 2519.2 2716.5 2808.5 2280.2 2745.5 2634.4 2594.9 2906.8 True False 2521.5978987800286 2948.13967233133 2276.263194352094 2674.8052624816883 2525.702411416246 2785.6285071552084 2366.974258773317 2690.7388486969144 2523.685329372777 2431.057571151595 2549.282027723391 0.9891404212471205 1.1564588147840726 0.8929036370232001 1.0492386614714397 0.9907504873722416 1.09271099739517 0.9284866221283168 1.0554888864531988 0.9899592520277276 0.9536244106041986 1.0 11.315875272573194 -2.5982160740655393 0.24099578322090603 0.9948595282656334 1.2160569690776142 0.0348241684934848 0.07055277512825638 90.83864166103216 1.4088428312241732 0.03208644075224351 7.704468121546408 0.0025222255800845662 2.5982160740655393 0.22119744081198078 SNRNS(ph)IER ddPTM_A549_MK2206_60min_R1 2 SNRNSIER 8 1 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.003)NRNS(0.997)IER;SNRNS(1)IER 91.93700000000001 0.00072434 257440000.0 4644.3 4489.8 4243.9 3860.8 5099.3 4069.8 3480.6 4333.1 5667.1 5928.7 6200.6 True False 5428.144297766637 4718.311642513672 4845.748835046036 4806.696173317898 4349.199725001861 4500.4635346854 4112.97996638385 4947.330194562205 4383.510898499095 4589.402552339023 4660.819892145865 1.1646329236866286 1.0123351152153914 1.0396773415792793 1.0312984162760408 0.9331404829289526 0.9655948178279345 0.8824584647252296 1.061472081961191 0.9405021004750527 0.9846770865514047 1.0 12.186368048616304 -2.0000000133864124 0.6862605178811738 0.9706577137931666 22.327784572058064 0.5629720000043785 0.04750880977386387 131.14358301394986 0.6815332400565138 0.007469264132337084 4294.446786012166 0.009999999691766468 2.0000000133864124 21.3571268582649 SNRNS(ph)IER ddPTM_A549_PD325901_60min_R1 2 SNRNSIER 8 1 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.001)NRNS(0.999)IER;S(0.001)NRNS(0.999)IER 97.734 0.00068382 317860000.0 4092.0 4067.0 3842.0 4001.0 4620.0 3765.4 3887.5 3585.2 4494.9 4425.0 4575.8 True False 4507.4168276288165 4409.740363137741 4102.741223822832 4248.132683069716 4295.5071381347525 3734.735830814393 4035.4409398216235 3513.6903734650105 4305.994984435805 4145.6047448247755 4013.005608386095 1.123202224838544 1.0988622477682508 1.0223611986111392 1.0585912649093412 1.070396495125326 0.930658014284806 1.0055906553902254 0.875575744554742 1.0730099592777647 1.0330423501431407 1.0 11.970467457023492 -5.465574873535482 0.9193903669436159 1.015950072424033 1.1672050636580225 0.32783816757746687 0.05683924116678287 1.7296392317618845 1.3364984573382297 0.00934735205643998 0.2417433283280999 3.423143666224203e-06 5.465574873535482 0.15125499123398956 SNRNS(ph)IERER ddPTM_A549_MK2206_60min_R1 1 SNRNSIERER 10 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 SNRNS(1)IERER 55.105 0.0058606000000000005 19107000.0 747.36 868.18 900.99 891.68 700.35 572.98 656.86 365.89 766.16 1466.1 1540.7 True False 873.4960968022899 912.3666537033997 1028.7639300850942 1110.1416400290361 597.329442748035 633.612363286658 776.2029594664406 417.7560279911301 592.6259833061122 1134.9069917493289 1158.1016688431973 0.7542481979797216 0.7878122260325754 0.8883191845433607 0.9585873761307439 0.5157832501395966 0.5471129006484894 0.670237320564241 0.36072483032376385 0.5117218973512692 0.9799718127364093 1.0 10.177546196622544 -6.7455212346608135 24.984827133421334 0.6936662135224447 0.8459308371880334 0.1729154773298318 0.19062242156198916 506.0584585238102 794295.7301795045 0.03348532392629071 0.06952720503586927 1.7967132284269992e-07 6.7455212346608135 0.15226462366558868 SNRNS(ph)IERER ddPTM_A549_PD325901_60min_R1 2 SNRNSIERER 10 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.003)NRNS(0.997)IERER;S(0.001)NRNS(0.999)IERER 69.352 0.0011972 82675000.0 1997.99 2296.2 2594.0 2618.5 2845.5 3465.6000000000004 2452.3 3049.1000000000004 3282.6000000000004 2608.7 3478.1 True False 2200.8244739575002 2489.7088325146 2770.044438989179 2780.238797955025 2645.6418964420873 3437.377302616018 2545.623618450049 2988.283308527324 3144.643737548996 2443.9862367964724 3050.3157494924735 0.7215071011332791 0.8162134798434719 0.9081172791538294 0.9114593459439779 0.8673337823739337 1.126892290802336 0.8345442988561438 0.979663600079608 1.030924007808771 0.8012240166294636 1.0 11.574742873780014 -3.8369946115093336 0.3628788638723776 1.0133199183807824 5.720210669836138e-14 0.27199419989663554 0.09566514245746312 7.045508976893111 0.2855894547216728 0.01724971584012236 3.907920788639943 0.00014554771392418205 3.8369946115093336 -1.013319918380725 SNS(ph)AWQIYLQR ddPTM_A549_MK2206_60min_R1 2 SNSAWQIYLQR 11 0 Q8N4C8-4;Q8N4C8 Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 S(0.001)NS(0.999)AWQIYLQR;S(0.004)NS(0.996)AWQIYLQR 129.37 1.0352e-07 8901000.0 3140.3 2955.8 2617.3 2869.2 4933.0 3654.2 3461.7 3509.4 5671.9 5539.1 5397.5 True False 3670.3058670362743 3106.2375947574315 2988.472496045145 3572.154128803284 4207.362234705583 4040.885018538356 4090.646081029411 4006.8681970867515 4387.22370616312 4287.813462927975 4057.1517865782844 0.9046508634895645 0.7656202573030096 0.7365937123504958 0.8804585868886022 1.037023620517285 0.9959905941666413 1.0082556177863327 0.9876061847974534 1.0813555757703637 1.0568531049572156 1.0 11.986251562470613 -6.6253119214555936 3.4869191865519378 1.0298494028574747 0.7989581339031744 0.8147550257036019 0.04716537783112238 0.07266737283939881 1.7260310731896829 0.0072213515377557045 0.01592076673949073 2.3696711356245271e-07 6.6253119214555936 -0.23089126895430034 SNS(ph)AWQIYLQR ddPTM_A549_PD325901_60min_R1 1 SNSAWQIYLQR 11 0 Q8N4C8-4;Q8N4C8 Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 SNS(1)AWQIYLQR 124.48 4.8254e-06 10060000.0 2701.6 2846.0 3238.8 2877.6 3225.7 3385.3 2724.3 3227.8 3729.8 3198.0 3880.0 True False 2975.864443187197 3085.8424080378686 3458.604444486567 3055.3428164962306 2999.137960060883 3357.731239192639 2827.974727294163 3163.418996839885 3573.049476728888 2996.0777342259066 3402.7845973464846 0.8745380020550808 0.9068579922585256 1.016404167099972 0.8978948649523124 0.8813775524902845 0.9867598559753155 0.8310766216290734 0.9296559645023494 1.0500369254977753 0.8804782226186957 1.0 11.732500113550765 -8.700427660263617 6.613739702263604 1.023569578295777 0.9159420859011745 0.03490065530506459 0.0656902648178616 0.12598378373177624 10.624754431302456 0.008333469998217238 0.009419774972352824 1.9932984990531587e-09 8.700427660263617 -0.10762749239460245 SNS(ph)DESNFSEK ddPTM_A549_MK2206_60min_R1 1 SNSDESNFSEK 11 0 A0A087WWW9;O95999 A0A087WWW9 BCL10 B-cell lymphoma/leukemia 10 1 S(0.008)NS(0.643)DES(0.349)NFS(0.001)EK 146.59 1.8797e-11 10095000.0 2691.8 3485.6 3268.6 2841.8 4345.2 3405.5 3465.0 3273.3 5187.1 4427.3 5128.2 True False 3146.1100318085055 3663.00215179867 3732.1366295698504 3538.04112757325 3706.0268360516325 3765.867749612055 4094.5456483135185 3737.300299060826 4012.230132096602 3427.1698551066097 3854.726408880177 0.8161694756236852 0.9502625512825424 0.968197540809144 0.9178449395066338 0.9614240916071284 0.9769481281308532 1.0622143348178659 0.9695371091580365 1.0408598967889346 0.8890825162614393 1.0 11.912412752439547 -3.1390052657549354 0.3781418884442761 1.0187189284598326 8.356291148627902e-19 0.3525563904425004 0.05238126951859617 10.199944438370537 0.2756777102975871 0.008584113214261982 6.69507385650243 0.0007260971535635681 3.1390052657549354 -1.0187189284598326 SNS(ph)DESNFSEK ddPTM_A549_PD325901_60min_R1 1 SNSDESNFSEK 11 0 A0A087WWW9;O95999 A0A087WWW9 BCL10 B-cell lymphoma/leukemia 10 1 S(0.239)NS(0.73)DES(0.031)NFSEK 143.81 2.5670000000000004e-11 14945000.0 3805.9 5327.7 4178.9 5235.4 4899.4 5351.1 4274.2 4927.6 5115.8 5510.0 4597.9 True False 4192.272166244503 5776.683976564774 4462.50528376711 5558.778767543913 4555.283046012424 5307.522415751552 4436.857019931983 4829.31515237258 4900.800716673718 5162.0976596575165 4032.3874484895373 1.0396501377403244 1.4325716589383344 1.1066658005392531 1.3785329010549658 1.1296739473084996 1.3162233251518671 1.1003052352010352 1.1976317291091554 1.215359580218283 1.2801591428400931 1.0 11.97741855027559 -11.280105841230556 0.37192656724933926 0.8717607190982065 1.2341428931422462 0.0 0.14350610933778066 3.004513492705076 0.3861083125565471 0.4547821414249728 0.03264337359987019 5.246795758263804e-12 11.280105841230556 0.3623821740440397 SNS(ph)EDKLNSK ddPTM_A549_MK2206_60min_R1 1 SNSEDKLNSK 10 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 S(0.054)NS(0.946)EDKLNSK 58.885 0.0028721999999999997 21244000.0 3930.6 3919.5 3174.9 3468.2 4375.5 3115.9 3715.0 3369.5 5108.1 6250.0 6187.2 True False 4593.989186056359 4118.985808461924 3625.1485606135084 4317.909155693414 3731.8697461897996 3445.622469832978 4389.967412261104 3847.1369436609716 3951.1235059595256 4838.120659186485 4650.747481967048 0.9877958766562225 0.8856610307123761 0.7794765410656613 0.928433369568184 0.8024236449430692 0.7408749847617272 0.943927278202676 0.827208305455839 0.8495674128255155 1.0402888305473397 1.0 12.18324689375619 -10.63953423374325 0.7853108811894652 1.0057585450565678 0.856592284463099 0.4138169977815904 0.07165645094522037 0.6089957790258657 0.6298304223411338 0.05587493368237983 0.012970109859584827 2.293325849374026e-11 10.63953423374325 -0.14916626059346882 SNS(ph)EDKLNSK ddPTM_A549_PD325901_60min_R1 2 SNSEDKLNSK 10 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 S(0.047)NS(0.953)EDKLNSK;S(0.142)NS(0.858)EDKLNSK 94.09 0.00016326 102346000.0 11673.0 11727.7 10643.3 11269.5 12450.1 12665.5 11796.3 13250.3 12918.8 12909.599999999999 13141.4 True False 12858.03436679158 12716.034437366725 11365.618341362186 11965.591420108518 11575.647926513315 12562.356367233142 12245.214651683036 12986.012371840736 12375.867762337153 12094.485652833873 11525.091110198213 1.1156557673903233 1.1033348297016656 0.9861629927858084 1.0382209828710611 1.0043866738953904 1.0900006123263601 1.0624831105107366 1.1267600618228342 1.0738195163928999 1.0494047758227107 1.0 13.492490535298343 -10.670690498794247 1.0317068570268482 1.0014746146634537 1.0649116663565932 0.08351083012191296 0.04401487274466688 0.6000078895953965 1.1751152898616266 0.026177943578009812 0.007624645294028853 2.1345655754978788e-11 10.670690498794247 0.06343705169313951 SNS(ph)FNNPLGNR ddPTM_A549_MK2206_60min_R1 2 SNSFNNPLGNR 11 0 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.041)NS(0.959)FNNPLGNR;S(0.001)NS(0.999)FNNPLGNR 151.66 6.2103e-12 62958000.0 6230.5 7738.799999999999 6522.2 6230.4 7660.1 6258.6 6402.5 6399.1 10122.099999999999 9468.400000000001 9718.0 True False 7282.056078899954 8132.671864912654 7447.146033586389 7756.848279693279 6533.309437273112 6920.880897877553 7565.751374697631 7306.192021421854 7829.460511672229 7329.4818639106115 7304.75239684442 0.9968929380885968 1.1133398400233097 1.0194932872472833 1.0618906512209996 0.8943916346973563 0.9474490745048805 1.0357300239178484 1.000197080544175 1.0718310609753832 1.0033853942916497 1.0 12.834619656678031 SNS(ph)FNNPLGNR ddPTM_A549_PD325901_60min_R1 1 SNSFNNPLGNR 11 0 O95835-2;O95835 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.045)NS(0.955)FNNPLGNR 200.79 4.6433999999999995e-24 53477000.0 5228.9 5821.0 5775.1 6655.6 6177.7 5916.6 5566.2 6455.0 5882.0 6869.4 5905.3 True False 5759.734078687267 6311.556098801277 6167.033014497456 7066.701296035696 5743.799663908018 5868.417171242482 5778.0247869415125 6326.24996115046 5634.799995205994 6435.6649116608605 5178.985536780978 1.112135579020608 1.218685793574209 1.1907801191371166 1.3644952753484685 1.109058834614569 1.1331209808494704 1.115667295439653 1.221523002182889 1.088012305728185 1.2426497170063497 1.0 12.33845381415933 -9.171189331628149 0.4466174542475603 0.995794961814634 1.2071199898718552 0.0 0.10047268880631673 0.5303305569353874 0.25956238448603947 0.04091779124619819 0.027244963185989866 6.742340298198325e-10 9.171189331628149 0.2113250280572212 SNS(ph)FSDER ddPTM_A549_MK2206_60min_R1 5 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.185)NS(0.77)FS(0.045)DER;S(0.001)NS(0.741)FS(0.258)DER;S(0.138)NS(0.839)FS(0.023)DER;SNS(0.912)FS(0.087)DER;S(0.069)NS(0.465)FS(0.465)DER 126.71 0.0010705 1545251600.0 14769.579999999998 17475.249999999996 15640.37 14207.82 22062.35 16985.86 15394.34 17919.25 24759.45 21696.54 24666.2 True False 17262.324022437864 18364.66558217228 17858.409648481105 17688.736537813267 18817.007540818326 18783.292430898662 18191.292310435423 20459.358562901572 19151.474107717073 16795.276545098553 18540.901787512234 0.9310401522144126 0.9904947338937606 0.9631899167120984 0.954038629864653 1.0148917111190383 1.0130732930989195 0.9811438795651093 1.1034716001074698 1.0329311015829918 0.9058500356444689 1.0 14.178423794641931 -6.793517548120368 7.098963257281025 1.0198599213200241 0.9621205457830927 0.1628695901794983 0.046668897400712034 0.13895757673038053 22.31874472950378 0.004664638280222175 0.00897866432790073 1.6087273742723078e-07 6.793517548120368 -0.057739375536931425 SNS(ph)FSDER ddPTM_A549_PD325901_60min_R1 5 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.039)NS(0.85)FS(0.11)DER;SNS(0.929)FS(0.07)DER;S(0.371)NS(0.622)FS(0.006)DER;S(0.071)NS(0.831)FS(0.098)DER;SNS(0.5)FS(0.5)DER 144.17 0.00092741 2888186000.0 23425.5 23236.550000000003 26011.79 24325.399999999998 26963.4 23723.699999999997 23088.5 23247.68 22303.899999999998 22096.9 25360.800000000003 True False 25803.639515058352 25194.77561717933 27777.106491000115 25827.924711008283 25069.583802680205 23530.50205276765 23967.145502011976 22783.986784947836 21366.544646901537 20701.69796291945 22241.5823753569 1.1601530448502675 1.1327780187570868 1.2488817577015758 1.1612449274124022 1.127149290891131 1.0579508982615753 1.0775827500729875 1.0243869523506524 0.9606575776090068 0.9307655189972635 1.0 14.440971811669794 -7.599634854645475 0.8964479794007496 0.981916897866862 1.1802349375181398 0.8430084358503985 0.036442405602423324 0.1444318229562161 0.23321491576740694 0.00650432412141238 0.012625744713011528 2.5139992590731927e-08 7.599634854645475 0.1983180396512778 SNS(ph)IGAR ddPTM_A549_MK2206_60min_R1 1 SNSIGAR 7 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 S(0.31)NS(0.69)IGAR 65.157 0.025235 6773800.0 1312.6 1432.9 1033.0 1115.1 2294.7 2340.9 2149.1 2662.3 3392.8 3529.0 3773.0 True False 1534.1347900110864 1505.828489589257 1179.4949331045875 1388.2995500587406 1957.1526697707084 2588.6124842363397 2539.5636515990136 3039.689177951805 2624.3362171882864 2731.7964490030545 2836.0599704974265 0.5409387692679888 0.5309579152958266 0.4158920986772052 0.48951699347007877 0.6900956574015734 0.9127495578953903 0.8954548486341036 1.0718000358147093 0.9253458123200388 0.9632364891507972 1.0 11.469672324370855 -7.106809802219496 1.9016181705818098 0.9684276175420031 0.4874020085357854 0.9471743733205634 0.0519290736602983 0.05393685210017657 0.38297501770150194 0.008311029334642372 0.016472101521837524 7.819701907755334e-08 7.106809802219496 -0.4810256090062177 down SNS(ph)IGAR ddPTM_A549_PD325901_60min_R1 1 SNSIGAR 7 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 S(0.011)NS(0.989)IGAR 87.806 0.012863999999999999 12490000.0 1997.0 1756.6 2090.5 1832.9 2233.9 1718.5 1649.5 1785.6 1783.7 2148.0 2244.4 True False 2199.7339698862997 1904.6348467882353 2232.373901197717 1946.1140701820766 2076.998570536628 1704.50510576686 1712.2726251410347 1749.9848072238985 1708.7372919838372 2012.3749134200266 1968.3530284238277 1.1175505298700161 0.9676286820933666 1.1341328862055329 0.9887017430711811 1.055196166817595 0.8659549791897616 0.8699011815538744 0.8890604388305339 0.8681050946191905 1.0223648321010026 1.0 10.942773279058994 -7.246422108845205 24.010253250804393 0.9220750655775289 1.0488940895720968 0.5008876192405358 0.0662302457385145 345.93076526270363 553088.2789672698 0.010077967725281535 0.017405163918352323 5.669932532182692e-08 7.246422108845205 0.1268190239945679 SNS(ph)IKR ddPTM_A549_MK2206_60min_R1 1 SNSIKR 6 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;Q9HAU0-3;F5H1X3;E9PMB7;Q8NFJ9-3;Q8NFJ9;Q8NFJ9-2 B4DJX4 PLEKHA5;BBS1 Pleckstrin homology domain-containing family A member 5;Bardet-Biedl syndrome 1 protein 1 S(0.031)NS(0.969)IKR 51.346000000000004 0.039151 14688000.0 2720.5 2120.1 1723.8 1120.2 1610.7 1807.2 1846.0 1678.0 2073.4 3583.5 3648.2 True False 3179.653890160874 2228.0040343207347 1968.2607605863375 1394.6490502876895 1373.768163681388 1998.4367044777289 2181.3943049889626 1915.8616386594788 1603.778210539433 2773.9848611511634 2742.251254802204 1.1595049449216934 0.812472610020353 0.7177536183599289 0.5085781428107266 0.5009636375498628 0.7287576953344759 0.7954757249792213 0.6986455509153073 0.5848399951430097 1.011572100219988 1.0 11.421145046680245 -10.942551534295022 1.1874867299043728 1.0009077612670396 0.7026738083859964 0.2800727324141975 0.17156462350512744 0.5195437733969444 1.2955790939029714 0.12684371704785669 0.02930833956760454 1.1414278523570953e-11 10.942551534295022 -0.29823395288104326 SNS(ph)ISVGEFYR ddPTM_A549_PD325901_60min_R1 2 SNSISVGEFYR 11 0 E9PC85;Q5S007 E9PC85 LRRK2 Leucine-rich repeat serine/threonine-protein kinase 2 1 SNS(0.837)IS(0.163)VGEFYR;S(0.019)NS(0.812)IS(0.168)VGEFYR 159.5 2.4956e-13 12494100.0 3238.3 4181.6 3927.8 3804.8 4105.4 3911.8 4066.8 4804.4 4372.1 4235.4 4711.1 True False 3567.0498320895404 4533.998107326475 4194.364127780146 4039.8138546722453 3817.050866861128 3879.9435977531566 4221.564299438351 4708.572473021114 4188.355841387303 3967.9761211821124 4131.664566123457 0.8633444886442784 1.0973780748083595 1.0151753756030386 0.9777690783021645 0.9238530393193278 0.9390751682907119 1.0217587202146088 1.1396308673331974 1.0137211708154317 0.9603819617198679 1.0 12.01250741678523 -7.798625349868522 24.6164035678011 1.0197904898641263 0.9756345885373879 0.14306735570529971 0.06831741339749785 273.2811187350363 180905.8021733241 0.010342355643386078 0.014290233709157699 1.5899177216442315e-08 7.798625349868522 -0.04415590132673841 SNS(ph)KDIQNLSVGLPR ddPTM_A549_MK2206_60min_R1 2 SNSKDIQNLSVGLPR 15 1 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 S(0.007)NS(0.993)KDIQNLSVGLPR;S(0.039)NS(0.961)KDIQNLSVGLPR 186.9 5.6682e-34 32540000.0 5444.5 6713.4 6505.799999999999 5448.700000000001 8793.5 6331.0 5866.9 5912.0 10111.7 10015.1 10526.2 True False 6363.398494754957 7055.083384750167 7428.4202669814385 6783.631744601435 7499.987798679014 7000.94221782232 6932.839787616326 6750.044104740663 7821.416095066843 7752.681954210972 7912.254031659167 0.8042459796277015 0.8916654289056927 0.9388500719590432 0.8573576780343761 0.9478952228618345 0.8848227306415555 0.8762155208713058 0.8531126626789063 0.9885193351693644 0.9798322858682619 1.0 12.949873030821239 -8.774751017616664 23.85419722648856 0.9945786051805482 0.8853100901132521 0.6171934435470021 0.03763428167051867 56.4493975264691 101155.79829004867 0.006207395011834074 0.00662944402898319 1.679766757655639e-09 8.774751017616664 -0.10926851506729607 SNS(ph)KDIQNLSVGLPR ddPTM_A549_PD325901_60min_R1 2 SNSKDIQNLSVGLPR 15 1 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1;A0A1B0GTX4 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 S(0.07)NS(0.93)KDIQNLSVGLPR;S(0.248)NS(0.752)KDIQNLSVGLPR 103.9 1.6430000000000002e-06 55041000.0 3405.0 3393.1000000000004 4143.1 3730.0 4185.0 3813.8999999999996 3985.7 4658.7 3718.3 4837.6 4539.6 True False 3750.673093371485 3679.048445085486 4424.275680484223 3960.3936285553737 3891.0600374662226 3782.8408628945126 4137.3779945587285 4565.778573820553 3562.032781736559 4532.153110410018 3981.2579788953863 0.942082405424057 0.9240919489739399 1.111275808786386 0.9947593573562391 0.9773443615291192 0.9501622057518802 1.0392137401019812 1.1468180655520706 0.8947003184970338 1.1383721262060689 1.0 11.959008643359445 SNS(ph)KSKPNLPSESR ddPTM_A549_PD325901_60min_R1 1 SNSKSKPNLPSESR 14 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 S(0.135)NS(0.836)KS(0.029)KPNLPSESR 62.203 0.0020317 7521900.0 1979.8 1649.7 2223.4 2387.7 2924.3 2809.2 2421.7 2438.3 2704.1 2119.8 2453.5 True False 2180.787838548271 1788.7260086226524 2374.293294390339 2535.182806139857 2718.9072562873275 2786.322806587292 2513.859118705089 2389.6661936906535 2590.456080761054 1985.9554662326693 2151.7350540179373 1.0135020268764425 0.8312947290060467 1.1034319908284331 1.1782039807391282 1.2635883080541486 1.2949190939583328 1.1682939839693354 1.1105764109890885 1.2038917504847508 0.9229553901277447 1.0 11.071284732544502 -5.868922463951206 6.468190943092088 1.1349863055332419 0.9241266332396596 0.3711086083091496 0.10891111584298692 0.16285311587773016 8.65369571329407 0.015329000241098898 0.048751770193915474 1.3523139747879628e-06 5.868922463951206 -0.21085967229358227 SNS(ph)LENEEGR ddPTM_A549_MK2206_60min_R1 2 SNSLENEEGR 10 0 J3QQJ5;Q9Y2L5-2;Q9Y2L5 J3QQJ5 TRAPPC8 Trafficking protein particle complex subunit 8 1 S(0.003)NS(0.997)LENEEGR;S(0.006)NS(0.994)LENEEGR 119.69 5.6745e-05 8443100.0 858.54 1154.98 1017.08 900.25 1010.5899999999999 1002.47 954.23 1062.76 1464.52 1510.02 1460.29 True False 1003.4405627122645 1213.7635486815548 1161.3172377173414 1120.8112904137577 861.9335497204776 1108.5507100142693 1127.6012392468142 1213.4094845659997 1132.808558357871 1168.9054332455644 1097.659691046299 0.9141636254819342 1.1057740013433348 1.05799388206591 1.0210917824133547 0.7852466085357246 1.0099220359978682 1.0272776238799246 1.1054514386051355 1.032021643500517 1.0649069495586134 1.0 10.100215127585498 -7.510925539505003 24.606249497840313 1.0242875703693792 0.9816419152097065 0.11240190237044956 0.08247053225585922 1221.2966528253094 2514102.095307907 0.0125836866869853 0.01947245636513745 3.0837166131548267e-08 7.510925539505003 -0.04264565515967278 SNS(ph)LENEEGR ddPTM_A549_PD325901_60min_R1 2 SNSLENEEGR 10 0 J3QQJ5;Q9Y2L5-2;Q9Y2L5 J3QQJ5 TRAPPC8 Trafficking protein particle complex subunit 8 1 S(0.009)NS(0.991)LENEEGR;S(0.006)NS(0.994)LENEEGR 127.71 1.5412e-06 13000900.0 2389.98 2175.42 1658.34 2022.56 2468.0 2031.76 2043.94 2106.71 1985.94 1915.14 1830.6399999999999 True False 2632.609010189716 2358.7502780371533 1770.8849248085246 2147.4889376329625 2294.6561941377854 2015.2140201878804 2121.723255186884 2064.6900163679757 1902.4778480923803 1794.217733560162 1605.482885383084 1.6397614911737597 1.4691843180093023 1.1030232342750723 1.3375969044481906 1.4292623204078927 1.2552074136293458 1.3215483481660535 1.2860243078052622 1.1849879344172705 1.11755643731577 1.0 10.64879157052642 -2.000000000000033 0.03709129451088171 9.980898603891467e-13 3.361799059649217 0.5545625218768595 0.11698395774902244 320.9576824494264 0.8836743616952795 22.67365255915705 69.55315038224397 0.009999999999999244 2.000000000000033 3.3617990596482192 SNS(ph)LNNGQPK ddPTM_A549_MK2206_60min_R1 2 SNSLNNGQPK 10 0 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 S(0.012)NS(0.988)LNNGQPK;S(0.053)NS(0.947)LNNGQPK 134.49 7.5628e-07 38535000.0 3699.9 4618.1 3982.0 3970.1 5541.5 4618.0 4863.0 5150.8 7738.200000000001 7396.5 7762.0 True False 4324.352666129832 4853.141564500065 4546.707476885252 4942.774678224562 4726.352690780663 5106.673694819695 5746.544152308414 5880.94167366343 5985.51005536618 5725.625512907652 5834.4811796981285 0.7411717568268119 0.8318034483318297 0.7792822252484316 0.8471661020046855 0.8100724889175493 0.8752575486213001 0.9849280467823422 1.007963089182114 1.0258855708016639 0.9813426998154943 1.0 12.510388657346194 -7.635740238889256 1.7632225269870911 1.01289281776275 0.8018469086438619 0.9203416873848437 0.02786907753034211 0.05673352470100036 0.35815070846095026 0.004012289299757944 0.00649583840274102 2.3134481007868997e-08 7.635740238889256 -0.2110459091188882 SNS(ph)LNNGQPK ddPTM_A549_PD325901_60min_R1 2 SNSLNNGQPK 10 0 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 SNS(1)LNNGQPK;S(0.008)NS(0.992)LNNGQPK 122.39 3.6675e-05 82525000.0 19054.3 21102.0 22419.0 19263.8 25313.0 23211.0 22071.0 22760.0 23663.0 24834.0 26202.0 True False 20988.678508965724 22880.339597475428 23940.488156398762 20453.681174735913 23535.10220510931 23021.97731158252 22910.923982714627 22306.033945125397 22668.526400299103 23265.97700180305 22979.320108163036 0.913372476216554 0.9956926266651185 1.0418275233432293 0.8900907893906779 1.0241861854193346 1.0018563300923917 0.9970235792387908 0.9707003444893714 0.9864750694798177 1.0124745593990914 1.0 14.488048492977686 -5.259410592361416 23.85575209757262 0.9913495030052542 0.9133724271283599 0.2723978819652707 0.036942589266037 88.09383042538919 1035704.5593147394 0.00442559265208556 0.04008816290430277 5.502871957577094e-06 5.259410592361416 -0.07797707587689429 SNS(ph)LPHSAVSNAGSK ddPTM_A549_PD325901_60min_R1 2 SNSLPHSAVSNAGSK 15 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.199)NS(0.689)LPHS(0.112)AVSNAGSK;S(0.182)NS(0.809)LPHS(0.009)AVSNAGSK 163.62 1.9654000000000003e-20 34185000.0 6915.5 7154.6 6641.0 7669.200000000001 9079.8 8921.0 7805.200000000001 8799.3 8194.3 7683.0 9071.1 True False 7617.556469077976 7757.543251070885 7091.698195577155 8142.909065983072 8442.066171609511 8848.35033374812 8102.231157169324 8623.791058582692 7849.922067445847 7197.894068811015 7955.412206440637 0.9575313348201949 0.9751277557673808 0.8914306401163944 1.0235684656780748 1.0611726900555678 1.1122428485333 1.0184552285813453 1.084015615382059 0.9867398273958216 0.9047795239300935 1.0 12.957720969810579 -6.288948950320452 24.228260134112467 1.0167065725139333 0.9447396862469117 0.3018872631188857 0.05503615686393555 451.57584478926276 397711.5446937549 0.006982552585448316 0.01622984145234479 5.14104079027745e-07 6.288948950320452 -0.07196688626702152 SNS(ph)LPIKK ddPTM_A549_PD325901_60min_R1 2 SNSLPIKK 8 1 Q96JQ2 Q96JQ2 CLMN Calmin 1 S(0.082)NS(0.918)LPIKK;S(0.116)NS(0.884)LPIKK 56.093999999999994 0.0081548 24796000.0 8323.3 9048.7 9065.2 8550.3 10591.6 10788.400000000001 9616.3 9653.099999999999 11860.2 9698.4 10437.400000000001 True False 9168.27528871039 9811.265705415415 9680.418985475982 9078.43261185978 9847.682555036374 10700.542847282626 9982.253558741268 9460.56134778955 11361.757038956492 9086.041368860699 9153.665968129952 1.0015960076139225 1.0718400408726962 1.0575455800091473 0.9917810682045741 1.0758184304870595 1.1689898762461282 1.090519753888353 1.033527045964765 1.2412247812531487 0.9926122933145366 1.0 13.160133931318263 -6.997857541486349 23.911209844910587 1.1118002246398893 1.0353295565274914 0.07031607067575008 0.07271798862665396 64.14708075967458 715886.619945908 0.012968605069455337 0.024383042306217295 1.0049453812667123e-07 6.997857541486349 -0.07647066811239789 SNS(ph)LRRDS(ph)PPPPAR ddPTM_A549_MK2206_60min_R1 2 SNSLRRDSPPPPAR 14 2 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 2 S(0.617)NS(0.676)LRRDS(0.707)PPPPAR;S(0.458)NS(0.568)LRRDS(0.974)PPPPAR 51.942 0.007221899999999999 62435000.0 1908.62 1976.08 1780.08 1365.12 3031.9100000000003 1845.1799999999998 1687.67 1611.01 2412.82 3068.55 2705.3500000000004 True False 2230.748394721132 2076.6540314798917 2032.5221108623552 1699.5744612825658 2585.920055346892 2040.435722868645 1994.29779344568 1839.3756010112081 1866.320122481796 2375.362423799468 2033.5369311384093 1.0969795338176231 1.021203008256823 0.9995009580300634 0.8357726064660722 1.2716366325834314 1.0033925086997921 0.9807039955400454 0.9045203816296042 0.9177704589003937 1.1680940667596822 1.0 10.989775476537334 -7.737322467726043 3.934063847701763 0.9558711194219094 1.038262275950724 0.0 0.11784306063452916 0.3478562476596121 11.730425311567872 0.015207937811421358 0.022338543133936295 1.830954416698369e-08 7.737322467726043 0.08239115652881468 SNS(ph)LSEQLAINTSPDAVK ddPTM_A549_PD325901_60min_R1 2 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.001)NS(0.548)LS(0.451)EQLAINTSPDAVK;S(0.001)NS(0.549)LS(0.45)EQLAINTSPDAVK 340.31 3.2359999999999987e-196 30509000.0 7238.9 8377.599999999999 8339.8 8962.5 9757.099999999999 8213.1 9333.7 10092.4 9046.3 9107.400000000001 9824.900000000001 True False 7973.7877990034785 9083.609753189752 8905.788979291427 9516.093269685662 9071.79495616766 8146.215236644631 9688.89906109662 9891.099164665366 8666.11547035565 8532.357209721398 8616.499585172547 0.9254091780756236 1.0542111287071863 1.0335738882430512 1.104403612583137 1.0528399457917452 0.9454204873012247 1.124458832188593 1.1479254501080898 1.0057582414636776 0.9902347380604599 1.0 13.072886184515887 -8.954104105782744 24.999963778011825 1.002540066048119 1.0510412186678575 0.10599873303861018 0.06398839265061577 209.13309412934643 113917.1841881123 0.010910331892051274 0.01161079174548219 1.1114652633136676e-09 8.954104105782744 0.04850115261973853 SNS(ph)LSTPRPTR ddPTM_A549_PD325901_60min_R1 2 SNSLSTPRPTR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.005)NS(0.9)LS(0.095)TPRPTR;S(0.025)NS(0.973)LS(0.003)TPRPTR 105.03 5.1007e-05 62561000.0 5132.9 5208.6 5425.1 5711.4 6617.299999999999 5390.4 6288.6 6196.7 5721.3 6474.799999999999 6382.7 True False 5653.988229358734 5647.54700158329 5793.2799097764855 6064.180206469477 6152.523676445691 5346.502369581427 6527.916114253963 6073.101957282893 5480.85365735669 6065.980023003716 5597.668363268916 1.010061308108101 1.008910609753459 1.034945183210771 1.083340386197536 1.09912257696752 0.9551302475624308 1.166184863163598 1.0849342196000218 0.979131542218766 1.0836619158805108 1.0 12.450610300897663 -8.771249729896537 24.99190470633281 0.9901454460168823 1.0558507356124982 0.0 0.059918931144000806 206.61204518415963 526343.1506352832 0.009007826003820631 0.009646318089363986 1.6933637950421468e-09 8.771249729896537 0.06570528959561595 SNS(ph)LTR ddPTM_A549_PD325901_60min_R1 1 SNSLTR 6 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(0.018)NS(0.981)LT(0.002)R 67.993 0.059444000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SNS(ph)LVSTFTMEK ddPTM_A549_MK2206_60min_R1 5 SNSLVSTFTMEK 12 0 Q9HB21 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 S(0.159)NS(0.561)LVS(0.1)T(0.1)FT(0.079)MEK;S(0.452)NS(0.53)LVS(0.007)T(0.007)FT(0.003)MEK;S(0.058)NS(0.934)LVS(0.006)T(0.002)FTMEK;S(0.002)NS(0.991)LVS(0.005)T(0.002)FTMEK;S(0.002)NS(0.835)LVS(0.158)T(0.005)FTMEK 138.77 1.2839e-08 20765500.0 10304.1 13210.1 12280.699999999999 11261.5 17394.3 13913.400000000001 13332.9 12977.599999999999 20083.899999999998 16234.500000000002 18129.6 True False 12043.180168941972 13882.437665100879 14022.287923501943 14020.568005547953 14835.621512089869 15385.706753032546 15755.315346146988 14817.214542233158 15534.928717397957 12567.115174650071 13627.519968494611 0.883739682406229 1.018706095987796 1.028968437097872 1.0288422279301024 1.0886516069239496 1.1290173698958195 1.1561395897838798 1.0873008864774365 1.1399674154441215 0.9221865169674245 1.0 13.734235413834712 -4.268516352681929 0.8052915469037585 1.0800247156558274 0.13748923424814358 0.4000525892206527 0.06456640534186872 6.63277238729778 0.9493194435421484 0.009353673523788048 8.171101243614816 5.3886955469795296e-05 4.268516352681929 -0.9425354814076838 SNS(ph)LVSTFTMEK ddPTM_A549_PD325901_60min_R1 3 SNSLVSTFTMEK 12 0 Q9HB21 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 S(0.024)NS(0.629)LVS(0.231)T(0.085)FT(0.032)MEK;SNS(0.999)LVSTFTMEK;S(0.182)NS(0.816)LVS(0.001)TFTMEK 150.12 3.5006e-12 28540000.0 7396.099999999999 7934.2 7850.6 7958.0 9393.300000000001 8443.3 8512.0 8860.6 8103.700000000001 9455.400000000001 8261.7 True False 8146.946627278952 8602.842879077323 8383.388925492853 8449.547586070685 8733.547013125799 8374.540564167191 8835.92881794512 8683.86838199377 7763.12967037586 8858.384430331342 7245.563275231304 1.124404869270688 1.1873256160063954 1.1570375700328455 1.1661684903029081 1.2053648117298366 1.1558163590669694 1.2194950871729218 1.1985083908768364 1.071432182079458 1.2225943096257827 1.0 12.822882134940448 -8.981129726660642 2.213785791717341 1.0265042118344108 1.177890001312764 0.0 0.06579598344825878 0.08283275917702607 0.8120144810242075 0.006179490191296998 0.006219739025320993 1.0444082009211493e-09 8.981129726660642 0.15138578947835324 SNS(ph)PDKFK ddPTM_A549_MK2206_60min_R1 3 SNSPDKFK 8 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 S(0.035)NS(0.965)PDKFK;S(0.234)NS(0.766)PDKFK;S(0.31)NS(0.69)PDKFK 80.014 0.0026004 141134000.0 23585.2 29281.3 29066.6 25193.4 40664.4 32204.1 30295.5 30052.199999999997 42630.0 38724.7 41300.4 True False 27565.805157221916 30771.59309945559 33188.68095118856 31365.784130974702 34682.72062780496 35611.91648664851 35799.800198696175 34312.19138100261 32974.37306612139 29976.763374527804 31044.370846947226 0.8879485847249058 0.9912132943896185 1.0690724290987588 1.010353351517803 1.1171983738628581 1.1471295927438785 1.1531816951676628 1.1052629009673336 1.0621691522978296 0.9656102719013742 1.0 14.922044073520576 -5.345347909248842 1.9986045521362077 1.0579718952247659 0.8543247049350796 0.45865533495106536 0.058239041975748924 0.484458194852983 2.3506399250563437 0.008894145197988848 0.16817177503882136 4.514941117524082e-06 5.345347909248842 -0.20364719028968625 SNS(ph)PDKFK ddPTM_A549_PD325901_60min_R1 4 SNSPDKFK 8 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 S(0.014)NS(0.986)PDKFK;S(0.011)NS(0.989)PDKFK;S(0.042)NS(0.958)PDKFK;S(0.209)NS(0.791)PDKFK 92.24700000000001 0.00072218 480973000.0 52017.3 51477.2 58128.0 55537.0 57596.9 71728.0 64869.0 71139.0 65474.0 61379.0 65789.0 True False 57298.05800288769 55815.3643032491 62072.91563205977 58967.394356321645 53551.49244251806 71143.87094934264 67337.62529267895 69720.0768375342 62722.35547196821 57503.51946499431 57697.370070831974 0.9930791981080928 0.9673814289061627 1.0758361352667578 1.0220118227907187 0.9281444262845214 1.2330522320515322 1.1670830959888145 1.2083752994623949 1.0870921048042108 0.9966402176459744 1.0 15.816217939802538 -5.763112000046625 24.966636835083754 1.0671638994225925 0.9802302952829937 0.14233874470990937 0.08999781818368648 68.8861172231771 1028324.9618579336 0.013189832047088863 0.04439119923490259 1.7253928736666546e-06 5.763112000046625 -0.08693360413959883 SNS(ph)PGTASSGSSR ddPTM_A549_PD325901_60min_R1 1 SNSPGTASSGSSR 13 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 S(0.003)NS(0.798)PGT(0.092)AS(0.019)S(0.062)GS(0.013)S(0.013)R 49.928999999999995 0.029342 45040000.0 468.31 296.55 325.16 632.02 528.54 773.82 299.77 455.26 620.81 543.32 401.16 True False 515.8524864483996 321.5413092423155 347.227312945922 671.0584399784359 491.4171737640136 767.5182664792032 311.17791139043806 446.179482155439 594.7195146249286 509.014682476429 351.81986316276186 1.4662403703163047 0.9139373381359123 0.9869463020775628 1.9073921351279282 1.3967863250991888 2.18156604229059 0.8844807925085182 1.2682043536269119 1.6904091465404114 1.446804844674004 1.0 8.45869312704011 -3.972349688662759 11.06330069251773 1.3526521630291097 1.3704626520819714 0.0 0.40558825465297055 0.0 0.0 0.05467797431617419 0.0 0.00010657376565961103 3.972349688662759 0.017810489052861644 SNS(ph)PKPAR ddPTM_A549_PD325901_60min_R1 1 SNSPKPAR 8 1 O94972-2;O94972-3;O94972 O94972-2 TRIM37 E3 ubiquitin-protein ligase TRIM37 1 S(0.351)NS(0.649)PKPAR 56.358999999999995 0.0052826 10500000.0 2850.5 2772.6 2394.7 2280.1 2455.5 2112.3 1817.2 2118.5 2045.8 2982.0 3797.0 True False 3139.8806615728095 3006.2567324405445 2557.2187425009206 2420.9365985171858 2283.0341510151256 2095.098129130832 1886.3545404099962 2076.2448555689 1959.822140461138 2793.7160110886975 3329.9930711661336 0.9429090675174443 0.90278167797742 0.7679351541729802 0.7270095002538235 0.6855972676890969 0.6291599064490389 0.5664740136379358 0.6234982509563655 0.5885364019015288 0.8389555027243235 1.0 11.701303460095364 -3.8069596085139232 11.083783052130713 0.7651794929674504 49.55150165008136 0.0 0.14402182824170184 0.0 0.0 0.02431861191789887 0.0 0.00015596975554933582 3.8069596085139232 48.786322157113915 SNS(ph)PLPVPPSK ddPTM_A549_MK2206_60min_R1 2 SNSPLPVPPSK 11 0 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.003)NS(0.997)PLPVPPSK;S(0.337)NS(0.663)PLPVPPSK 206.7 7.1525e-25 289920000.0 72880.0 81720.0 74844.0 71302.0 113781.0 90390.0 78958.0 87962.0 133949.0 121207.0 126543.0 True False 85180.36225507247 85879.19894565828 85458.00462079344 88770.9932008683 97043.9656247794 99955.00980397417 93303.64655109355 100430.88287232707 103609.76537259885 93826.25451808247 95118.88069087091 0.89551476674649 0.9028617486023528 0.8984336653258718 0.9332636439380236 1.02023872568649 1.0508429985506276 0.980916153274798 1.055845928199258 1.0892660281539968 0.9864104143846123 1.0 16.537444117853887 -6.7143306940726015 2.497131396246879 1.0398979169217062 0.8996446282688478 0.7679145918015486 0.031354076643264873 0.10550425848540498 1.3394815865236471 0.005354672455795103 0.012033344697135587 1.9304977772857982e-07 6.7143306940726015 -0.14025328865285835 SNS(ph)PLPVPPSK ddPTM_A549_PD325901_60min_R1 2 SNSPLPVPPSK 11 0 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.008)NS(0.992)PLPVPPSK;S(0.003)NS(0.997)PLPVPPSK 201.74 4.009e-24 529680000.0 112708.0 115063.0 117583.0 113391.0 139847.0 124698.0 119895.0 123060.0 131095.0 132706.0 139788.0 True False 124150.0331887557 124759.76282363375 125562.88946401847 120394.90454035436 130024.62916595902 123682.50083149015 124457.66983406135 120605.47176129738 125585.53304514287 124326.92051225231 122594.96218914176 1.012684623999596 1.017658153286528 1.0242092107365532 0.9820542572916404 1.0606033628474443 1.0088709896632662 1.0151939982822928 0.9837718419067256 1.0243939131151834 1.0141274836435648 1.0 16.903540169827064 -11.07374681056495 1.340403522397723 0.9998617414311703 1.0154008731183077 0.0 0.0203381402785066 0.9877586797417575 3.1200345406934837 0.014066913626124134 0.0029824858698136035 8.43826557022417e-12 11.07374681056495 0.015539131687137386 SNS(ph)PRGEAQK ddPTM_A549_MK2206_60min_R1 2 SNSPRGEAQK 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.088)NS(0.912)PRGEAQK;S(0.224)NS(0.776)PRGEAQK 78.985 0.00036033 95482000.0 9161.099999999999 10054.3 8787.5 6985.5 4373.6 3575.2 3140.5 3137.2 5074.3 15752.0 14827.4 True False 10707.26971260899 10566.020924612503 10033.699636647201 8696.947813591016 3730.249233672888 3953.5252909743094 3711.0881987095545 3581.90770727206 3924.9791519920186 12193.61225976087 11145.347364578201 0.9606941230596817 0.9480207820344034 0.9002590326198352 0.780320929362093 0.3346911596069451 0.354724277463014 0.3329719637544919 0.3213814329965137 0.35216301687162 1.094054035364948 1.0 13.444153961005329 -3.1087330252896623 13.033108672689728 0.6486863673177117 0.9612092739927893 0.0 0.3117512012551242 0.0 0.0 0.04499200070734262 0.0 0.0007785149820340921 3.1087330252896623 0.31252290667507765 SNS(ph)PRGEAQK ddPTM_A549_PD325901_60min_R1 4 SNSPRGEAQK 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.003)NS(0.997)PRGEAQK;S(0.068)NS(0.932)PRGEAQK;S(0.375)NS(0.625)PRGEAQK;S(0.056)NS(0.944)PRGEAQK 89.74700000000001 0.00018859999999999998 145579000.0 12392.9 12779.599999999999 12176.899999999998 11766.2 14084.5 13416.1 11894.699999999999 12835.3 12872.599999999999 14066.599999999999 15302.900000000001 True False 13651.018084829215 13856.581742010098 13003.29765964816 12492.971451020965 13095.253308887211 13306.84372969378 12347.359317529594 12579.289872401936 12331.609387672324 13178.43247537903 13420.740313075654 1.017158350909242 1.0324752151347276 0.9688957059231088 0.9308705153060166 0.9757474627631887 0.9915133904147667 0.9200207313079235 0.9373022336291014 0.918847179813009 0.9819452703767357 1.0 13.712176635032755 -5.825517030880973 5.104130282680005 0.9574940174137968 1.02490863078663 0.47506093862794485 0.027091309579605212 0.14732731138479463 7.3616715247686155 0.00469095187106386 0.015696115571811924 1.4944554360687344e-06 5.825517030880973 0.06741461337283317 SNS(ph)SEALLVDR ddPTM_A549_MK2206_60min_R1 2 SNSSEALLVDR 11 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 S(0.029)NS(0.942)S(0.029)EALLVDR;S(0.003)NS(0.976)S(0.021)EALLVDR 126.48 1.251e-06 3431900.0 778.24 804.8900000000001 741.47 734.89 1349.1399999999999 635.9100000000001 973.25 1144.03 1413.96 1365.65 1466.27 True False 909.5878858587745 845.8554630368457 846.6215954008308 914.9380829904657 1150.6832931949511 703.2015741171053 1150.0769270479454 1306.199755944936 1093.700317630143 1057.1487165148828 1102.1546920066962 0.8252815076281944 0.7674562102501185 0.7681513326041233 0.8301358145331081 1.0440306624289724 0.6380243891506593 1.0434804981449537 1.1851328723799508 0.9923292306988593 0.9591654639605346 1.0 10.106111011047142 -7.7981540643342075 24.998855400928008 1.0166568559586326 0.8195004636435658 0.5240401575672234 0.10536411727947183 111.9891646664145 76252.49580765943 0.0158411242182949 0.021887985421085172 1.5916439971668786e-08 7.7981540643342075 -0.19715639231506688 SNS(ph)SEALLVDR ddPTM_A549_PD325901_60min_R1 2 SNSSEALLVDR 11 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 S(0.003)NS(0.94)S(0.057)EALLVDR;S(0.002)NS(0.978)S(0.02)EALLVDR 123.02 7.4463e-06 5157300.0 993.21 1278.15 1415.52 1185.31 1583.54 1349.74 1362.55 1558.47 1596.5300000000002 1460.79 1215.24 True False 1094.0399480374422 1385.8641861678154 1511.5856994132462 1258.523906665675 1472.3176133164295 1338.7481649448703 1414.4025858659688 1527.385093253936 1529.4333961826294 1368.5554701000185 1065.773184041067 1.0265223073911438 1.3003368886736921 1.4182996176370308 1.180855294082142 1.3814549243337853 1.2561285881380224 1.327114068026193 1.4331239668299647 1.435045860680706 1.2840963636473748 1.0 10.057684723625467 -10.905178228245397 1.1694855810245406 1.0008028401137374 1.3207765042196777 0.045178259551441835 0.14205596855487349 0.3166008303923624 0.7722239978389089 0.08095904652075962 0.019479280754634225 1.2440039855540418e-11 10.905178228245397 0.3199736641059403 SNS(ph)SSEAVLGQEELSAQAK ddPTM_A549_MK2206_60min_R1 2 SNSSSEAVLGQEELSAQAK 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.001)NS(0.753)S(0.195)S(0.051)EAVLGQEELSAQAK;SNS(0.697)S(0.228)S(0.075)EAVLGQEELSAQAK 417.96 0.0 49387000.0 11088.0 12114.400000000001 9938.7 8805.6 13677.5 10830.7 9355.1 10472.3 14690.2 14322.0 13629.5 True False 12959.38332442704 12730.971215213971 11348.157107111874 10962.972395298411 11665.557868474685 11976.797485163199 11054.80057562419 11956.780595073687 11362.893155428948 11086.65025293901 10244.918994936306 1.2649571295617268 1.2426619694608059 1.1076863675272453 1.07008873381205 1.1386676531303517 1.1690475533367222 1.0790520238459844 1.16709371747922 1.1091247437920413 1.0821608505073337 1.0 13.32262095676677 -2.0000000008021863 0.018991148347773157 5.129961805247023e-16 2.577861017558879 0.47268509316419394 0.05371530322243844 1328.8724573496515 1.892507068211826 96.02926419863267 171.04426546126373 0.009999999981528977 2.0000000008021863 2.5778610175588788 SNS(ph)TSSMSSGLPEQDR ddPTM_A549_PD325901_60min_R1 1 SNSTSSMSSGLPEQDR 16 0 P42684-2;P42684-6;P42684-3;P42684 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 S(0.094)NS(0.543)T(0.11)S(0.11)S(0.11)MS(0.03)S(0.004)GLPEQDR 43.791000000000004 0.021769999999999998 2110600.0 201.34 440.44 424.32 606.24 617.23 672.85 354.56 584.87 646.62 453.98 392.89 True False 221.77988858132588 477.5574245243143 453.1169068434418 643.686067929064 573.8778941279033 667.3705326827064 368.0529748226766 573.2043090283609 619.4448100816215 425.3156253232885 344.5670207349122 0.6436480430085882 1.3859638206400384 1.3150327209986847 1.8681012087464832 1.6655044145081088 1.9368380968651628 1.0681607718512127 1.663549540538726 1.7977483996014312 1.2343480360254764 1.0 8.428640814439536 -5.166574321359593 2.355663254217672 1.4683173313227018 0.3049766446324355 0.3905180175494982 0.30506140046146096 0.8426471109586368 4.3826414463069305 0.05072090189143817 2.19247657334083 6.814369495877109e-06 5.166574321359593 -1.1633406866902662 SNS(ph)TTQVSQPR ddPTM_A549_MK2206_60min_R1 4 SNSTTQVSQPR 11 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.001)NS(0.974)T(0.022)T(0.003)QVSQPR;SNS(0.982)T(0.018)TQVSQPR;S(0.024)NS(0.681)T(0.247)T(0.033)QVS(0.015)QPR;S(0.014)NS(0.781)T(0.147)T(0.058)QVSQPR 139.89 6.251899999999999e-09 69883000.0 2505.48 2267.56 2369.58 2051.48 2821.71 1701.71 1774.04 1821.6 3021.18 2960.34 3324.79 True False 2928.3437708951515 2382.969118468151 2705.6220751074234 2554.0926920944357 2406.640196896634 1881.7838226963224 2096.3601044542897 2079.817378416035 2336.887553833088 2291.5971379545786 2499.152883464124 1.1717345466421076 0.9535107412736877 1.082615670697628 1.021983372443449 0.9629823820785 0.7529686699630579 0.838828275903027 0.8322089425490288 0.9350718674697016 0.9169495604359152 1.0 11.287223444377611 -4.667339938231441 0.7169155222038448 0.9367266387856186 1.4952092756698434 0.41350554423805264 0.08669096631215346 5.654387878119162 1.1236083581554928 0.01574759637580324 3.117982687670254 2.151097332751978e-05 4.667339938231441 0.5584826368842248 SNS(ph)TTQVSQPR ddPTM_A549_PD325901_60min_R1 3 SNSTTQVSQPR 11 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.001)NS(0.534)T(0.437)T(0.027)QVS(0.001)QPR;SNS(0.492)T(0.492)T(0.016)QVSQPR;S(0.007)NS(0.478)T(0.478)T(0.036)QVS(0.001)QPR 139.77 7.31e-09 54735000.0 4015.33 4286.32 4025.55 4428.85 5002.110000000001 4134.46 3812.21 4150.8099999999995 4000.93 4330.19 4836.15 True False 4422.963345670285 4647.543229241347 4298.748030598646 4702.410005851868 4650.77904994269 4100.7903285358425 3957.285737671356 4068.0188383025475 3832.7848257088585 4056.7810644051524 4241.334208880723 1.0428235851844114 1.0957738768876273 1.0135367360576555 1.1087100837292474 1.0965368020762547 0.9668632856022987 0.9330285100818955 0.9591365919207029 0.9036743243867879 0.9564870072985185 1.0 12.050302453636908 -7.323367768050155 5.786533036183212 0.9524327106490285 1.0715882081152117 0.7613086556266969 0.03301080556657536 0.10109726731350242 6.963248883560002 0.006188785071841007 0.00999105336117635 4.749328742666765e-08 7.323367768050155 0.11915549746618326 SNS(ph)VEKPVSSILSR ddPTM_A549_MK2206_60min_R1 2 SNSVEKPVSSILSR 14 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5 Q9UI08-4 EVL Ena/VASP-like protein 1 S(0.089)NS(0.745)VEKPVS(0.008)S(0.01)ILS(0.148)R;S(0.311)NS(0.678)VEKPVS(0.004)S(0.002)ILS(0.006)R 50.425 0.0071948 37698000.0 7832.0 9176.2 8282.3 7263.5 12413.7 9179.7 7775.9 9740.4 14559.099999999999 13801.7 14257.099999999999 True False 9153.850125984176 9643.22938528086 9456.85468001173 9043.057826070903 10587.661174328952 10151.089761008307 9188.680377120083 11121.13152872394 11261.48709610527 10683.88638430306 10716.668594057479 0.8541693760185973 0.8998346175068012 0.8824435128334255 0.843831060623204 0.9879619847720156 0.9472243796581717 0.8574194766287087 1.0377414801173137 1.05083842028575 0.9969410074159989 1.0 13.387568875849968 -8.269835226996902 24.82033782502937 1.0257079028299383 0.8992287988954658 0.6703136595781838 0.04218070591318188 256.18488504690515 757348.4040862959 0.007159791844540358 0.00872717233392754 5.372355869641182e-09 8.269835226996902 -0.12647910393447248 SNS(ph)VEKPVSSILSR ddPTM_A549_PD325901_60min_R1 4 SNSVEKPVSSILSR 14 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5 Q9UI08-4 EVL Ena/VASP-like protein 1 S(0.091)NS(0.908)VEKPVS(0.001)S(0.001)ILSR;S(0.017)NS(0.974)VEKPVS(0.004)S(0.005)ILS(0.001)R;S(0.096)NS(0.895)VEKPVS(0.004)S(0.004)ILS(0.001)R;S(0.146)NS(0.837)VEKPVS(0.009)S(0.005)ILS(0.002)R 63.446999999999996 0.0015639 87590500.0 16649.9 16455.7 16817.6 16453.0 21391.6 19277.800000000003 20641.8 20026.8 20625.1 20429.5 19995.2 True False 18340.18559099145 17842.47959028417 17958.943468444268 17469.264442525877 19889.12781301371 19120.807988334214 21427.334994626373 19627.34976327933 19758.298772717288 19139.57788347971 17535.917160016095 1.045864064230936 1.0174819729969455 1.0241234207807917 0.9961990743408509 1.1341937596719038 1.090379694079067 1.221911280664758 1.1192656525563396 1.1267331267832672 1.0914500626816455 1.0 14.098025267659645 -6.747284626453119 24.99852218341443 1.084807773154267 1.0209007823688425 0.3276925674433042 0.054526371546901556 357.0457494380502 630570.0431741863 0.01008545175803978 0.020915326703235728 1.7894327172737543e-07 6.747284626453119 -0.06390699078542439 SNS(ph)WVNTGGPK ddPTM_A549_MK2206_60min_R1 1 SNSWVNTGGPK 11 0 Q96N67-2;Q96N67-6;Q96N67;A0A0U1RRC1;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.01)NS(0.99)WVNTGGPK 145.6 2.1238000000000005e-11 24736000.0 3759.6 3108.0 2897.4 2744.5 5036.6 4010.2 4180.0 3828.9 6148.7 5350.4 5989.1 True False 4394.12856660497 3266.183924658673 3308.29488787728 3416.902623205288 4295.722811943674 4434.556702244681 4939.451893203611 4371.658300514468 4756.029267456261 4141.740923985816 4501.8411792489105 0.9760736533442276 0.7255218019938243 0.7348759665549192 0.7590011480092609 0.9542146514951855 0.9850540091653222 1.0972070529657627 0.9710823030953387 1.0564631398768622 0.9200104488530239 1.0 12.136299445418686 -6.924025869312949 3.1082652119116294 1.0251466863957823 0.7888925030754299 0.59929046052204 0.07759227712862819 0.10045291775909408 1.964915852579075 0.009936710965885583 0.019701030431460802 1.1911710522685745e-07 6.924025869312949 -0.23625418332035242 SNS(ph)WVNTGGPK ddPTM_A549_PD325901_60min_R1 2 SNSWVNTGGPK 11 0 Q96N67-2;Q96N67-6;Q96N67;A0A0U1RRC1;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.016)NS(0.979)WVNT(0.006)GGPK;S(0.362)NS(0.638)WVNTGGPK 152.18 4.9429e-12 80288000.0 31224.0 29435.0 30420.0 28526.0 32421.0 31478.0 26810.0 24017.0 37236.0 35778.0 43512.0 True False 34393.8374941061 31915.590752141492 32484.48413032029 30287.986232753505 30143.860806378107 31221.653604497653 27830.26922099494 23537.96209402799 35671.10041167805 33518.970974088326 38160.29984529388 0.901298931967059 0.8363558693598023 0.8512638596136828 0.7937040944527267 0.789927252369208 0.818171076513385 0.7292990184516883 0.6168180593300765 0.9347699194265423 0.8783728406217451 1.0 15.21978488694159 -8.970321903834348 19.850080989126045 0.9712233894662011 0.7931501514619312 0.41548743336912186 0.07519437148351729 10.278919646469166 6875.281219740307 0.012897309982179594 0.013538116893087086 1.0707253776438945e-09 8.970321903834348 -0.17807323800426988 SNSAEPNS(ph)AEQDEAEPR ddPTM_A549_MK2206_60min_R1 1 SNSAEPNSAEQDEAEPR 17 0 Q5JTM7;Q68BL7-3;Q68BL7-2;Q68BL7 Q5JTM7 OLFML2A Olfactomedin-like protein 2A 1 SNS(0.002)AEPNS(0.998)AEQDEAEPR 64.65 0.0026325 1552400.0 219.25 0.0 0.0 158.91 175.75 170.06 0.0 0.0 0.0 190.17 324.37 True False 256.25403985214916 0.0 0.0 197.84295713374095 149.8974078146172 188.0556363233082 0.0 0.0 0.0 147.2104649211989 243.81997684342707 1.0509969001297494 0.0 0.0 0.8114304647842248 0.6147872284922586 0.7712888777939273 0.0 0.0 0.0 0.603767036758159 1.0 7.929672524560747 -10.980680249583774 1.285885447469002 0.9956455372275266 0.3160618127597995 0.125474408682948 0.3947448527200301 0.4595870333073304 1.3658886694414352 0.26789933612470346 0.06332228254529326 1.0454896803618585e-11 10.980680249583774 -0.6795837244677271 SNSAEPNS(ph)AEQDEAEPR ddPTM_A549_PD325901_60min_R1 1 SNSAEPNSAEQDEAEPR 17 0 Q5JTM7;Q68BL7-3;Q68BL7-2;Q68BL7 Q5JTM7 OLFML2A Olfactomedin-like protein 2A 1 SNS(0.001)AEPNS(0.999)AEQDEAEPR 74.257 0.00052673 1369500.0 167.85 279.22 195.55 139.41 0.0 0.0 383.88 146.5 148.34 246.96 179.49 True False 184.89000843536078 302.7508493226752 208.82119893767697 148.02103907691802 0.0 0.0 398.4887634671961 143.57794257297326 142.1057856662456 231.3669034535427 157.41386788085578 1.1745471407595505 1.9232793997020825 1.3265743466498812 0.940330360149418 0.0 0.0 2.5314717745758357 0.9121047878808574 0.9027526454899346 1.4698000028095421 1.0 7.298418835077662 SNSDES(ph)NFSEK ddPTM_A549_MK2206_60min_R1 1 SNSDESNFSEK 11 0 A0A087WWW9;O95999 A0A087WWW9 BCL10 B-cell lymphoma/leukemia 10 1 S(0.049)NS(0.277)DES(0.662)NFS(0.012)EK 143.56 2.6293000000000004e-11 8472800.0 4230.8 4710.2 4468.2 3570.1 5776.8 4726.5 4459.7 4734.9 6928.7 6016.3 6059.0 True False 4944.855606871021 4949.929061109161 5101.857947819859 4444.774660267878 4927.0403724806865 5226.655092803221 5269.969762708168 5406.086575023097 5359.360512860312 4657.21365149818 4554.38308010705 1.0857355474706343 1.0868495192531793 1.1202083483280332 0.9759334210778344 1.081823879506613 1.1476098959774745 1.1571204420038155 1.187007434362774 1.176747853352367 1.0225783755082616 1.0 12.153039929787687 -7.007445965139085 24.811582312787234 1.104604727585181 1.0669372408265936 0.09846901050445644 0.06476673822666679 946.2879962822706 3153254.574439143 0.011909540590489473 0.021872241530042653 9.830011702649102e-08 7.007445965139085 -0.03766748675858733 SNSFS(ph)DER ddPTM_A549_MK2206_60min_R1 1 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.138)NS(0.045)FS(0.817)DER 83.948 0.0032551999999999998 11914000.0 649.9 821.63 693.41 728.4 740.16 761.43 553.1 777.44 1010.0 893.04 1051.8 True False 759.5872314705202 863.4474575345249 791.7459647280266 906.8580326991184 631.2834444840231 842.0040172036719 653.5911105576355 887.6445008101455 781.2366126385782 691.3016437567836 790.6090317967644 0.960762147814397 1.0921295138410265 1.0014380469809185 1.1470372791443613 0.7984774004533535 1.0650068280779763 0.826693200142506 1.122735087901608 0.988145317367693 0.8743912805874586 1.0 9.626820626154077 SNSGLATYS(ph)PPMGPVSER ddPTM_A549_MK2206_60min_R1 4 SNSGLATYSPPMGPVSER 18 0 H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 SNSGLAT(0.095)Y(0.027)S(0.877)PPMGPVS(0.001)ER;SNSGLAT(0.036)Y(0.026)S(0.937)PPMGPVSER;SNSGLAT(0.007)Y(0.003)S(0.99)PPMGPVSER;SNSGLAT(0.218)YS(0.782)PPMGPVSER 120.11 3.2708999999999995e-10 33114500.0 6052.400000000001 7313.1 5936.000000000001 4808.1 8870.1 6586.499999999999 5938.6 6434.700000000001 9701.2 9286.3 9795.900000000001 True False 7073.8971530268955 7685.305553224362 6777.814058963054 5986.084715843809 7565.320040150421 7283.479058235148 7017.566749516498 7346.838430442282 7503.893689633048 7188.518380384548 7363.307676913799 0.96069558185185 1.0437300586148428 0.9204849717489811 0.8129613725923743 1.0274350023251089 0.9891585925535968 0.953045432492071 0.997763335827572 1.0190927798874994 0.9762621223777912 1.0 12.846138270660406 -7.886894138664261 1.0362275257284699 1.0088037487901163 0.9509035697925342 0.0909010809256936 0.05794271913832778 0.6989469465774523 1.5085940366045865 0.010741136578334077 0.01704218128288392 1.2974955031115548e-08 7.886894138664261 -0.05790017899758204 SNSGLATYS(ph)PPMGPVSER ddPTM_A549_PD325901_60min_R1 4 SNSGLATYSPPMGPVSER 18 0 H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 SNSGLAT(0.112)Y(0.001)S(0.887)PPMGPVSER;SNSGLAT(0.009)YS(0.991)PPMGPVSER;SNSGLAT(0.057)YS(0.943)PPMGPVSER;SNSGLAT(0.023)YS(0.977)PPMGPVSER 166.57 1.1267000000000001e-23 67260000.0 11666.199999999999 12482.5 10612.8 11651.6 13226.2 12806.8 11883.999999999998 11860.3 13227.1 13594.1 15217.000000000002 True False 12850.544035797471 13534.444082337559 11333.048427950787 12371.292869296456 12297.237339912954 12702.505666881007 12336.25212317433 11623.737012274643 12671.210985479289 12735.766206016377 13345.405468510688 0.9629189660905491 1.0141650708382686 0.849209748980038 0.9270076430789075 0.9214585026231723 0.9518261319862747 0.9243819644358114 0.8709916712310894 0.9494811540479454 0.9543184158823205 1.0 13.704055518564218 -9.856858170063598 0.997168856492639 0.9927732418066907 0.929058271899147 0.1288083369559564 0.04341919975941875 0.44979665216228815 0.915285566221739 0.014102460049439948 0.008208056452409584 1.3904066298134896e-10 9.856858170063598 -0.06371496990754366 SNSLRLS(ph)LIGDR ddPTM_A549_PD325901_60min_R1 2 SNSLRLSLIGDR 12 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 SNSLRLS(0.999)LIGDR;S(0.031)NS(0.023)LRLS(0.945)LIGDR 97.836 7.047e-05 4749700.0 661.3299999999999 744.98 657.53 725.8399999999999 852.1300000000001 786.99 669.46 815.76 802.4200000000001 739.84 810.27 True False 728.4677347545853 807.7620791075373 702.1539398490961 770.6734882977563 792.2793284889109 780.5810143657033 694.9366666425685 799.4890268486603 768.697077890716 693.126376138116 710.6119267247253 1.025127368903248 1.1367133715734068 0.9880976007331979 1.0845209027800309 1.114925458879642 1.0984631484634262 0.9779411807026579 1.125071219299087 1.0817396232479666 0.9753936713851655 1.0 9.472918092463306 -10.720980576472932 0.9321534509118555 0.9991197141149678 1.071495694251696 0.2689512427130132 0.05112003419655268 0.6937270120237062 1.05179721269876 0.034085260674629435 0.008440683037763855 1.9011633062653694e-11 10.720980576472932 0.07237598013672819 SNSLSEQLAINT(ph)SPDAVK ddPTM_A549_PD325901_60min_R1 1 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 SNSLSEQLAINT(0.699)S(0.301)PDAVK 360.94 1.0030999999999997e-245 21794000.0 5938.0 6221.0 6973.0 5967.4 8567.5 7184.6 7191.5 7406.2 7968.2 6815.7 8018.7 True False 6540.821388675443 6745.2655026014 7446.2297120553385 6335.992745051297 7965.748356270449 7126.090999646537 7465.176467839801 7258.477530948495 7633.324264161916 6385.355538825362 7032.450734727382 0.9300913202812507 0.9591628519048395 1.0588385177424207 0.9009651093271279 1.1327129981777608 1.013315452670965 1.0615327073640985 1.0321405445622187 1.085442977434214 0.9079843968608896 1.0 12.779811825552443 -5.239418710340849 0.7162874875914595 1.0426756633569387 0.8539789136761696 0.11124102927743185 0.06821179224196414 2.698485559760243 0.9378897995549625 0.00876661394719742 0.41323355088593905 5.762106614794155e-06 5.239418710340849 -0.1886967496807691 SNSLSEQLAINTS(ph)PDAVK ddPTM_A549_MK2206_60min_R1 2 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 SNSLSEQLAINT(0.27)S(0.73)PDAVK;SNSLSEQLAINT(0.029)S(0.971)PDAVK 192.85 1.5939e-40 26398000.0 3523.5 4237.0 3993.7 4234.6 4947.1 3653.7999999999997 3392.1000000000004 3274.8999999999996 6469.299999999999 5069.5 5815.1 True False 4118.180658695767 4452.645202309777 4560.066712816835 5272.077190098416 4219.3881433837405 4040.4426908038513 4008.400661946404 3739.127103960623 5004.013879349259 3924.2964290793384 4371.0501814046065 0.9421490231833528 1.0186671434824275 1.0432428189034173 1.2061351325882677 0.9653030663738272 0.9243642884707133 0.9170337780607067 0.8554299193058179 1.1448081517428963 0.8977925821520294 1.0 12.093764225596924 -8.794124663394795 24.999908131373047 1.0683815930849534 0.9897238303856676 0.0 0.10470908366576795 324.8405865782813 248458.56213954205 0.018044615144757078 0.019210597035476215 1.606480049817281e-09 8.794124663394795 -0.07865776269928582 SNSLSEQLAINTS(ph)PDAVK ddPTM_A549_PD325901_60min_R1 1 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 SNSLSEQLAINT(0.226)S(0.774)PDAVK 276.62 9.462899999999997e-116 27551000.0 5636.9 5308.7 5362.4 5255.1 6236.6 6296.5 6294.5 6229.3 5680.8 5761.9 6283.3 True False 6209.153938333541 5756.082779884272 5726.324710730751 5579.695591801968 5798.56273110199 6245.223391597921 6534.040641982567 6105.051724708683 5442.055731514144 5398.092650667995 5510.4939331204 1.1267871834526302 1.0445674833770853 1.0391672289689164 1.0125581589457229 1.05227640234756 1.1333327769515338 1.1857450024053595 1.1078955532488184 0.98758038708746 0.97960232171261 1.0 12.427965925223612 -8.767386103624553 24.963298166331896 0.9941351757844462 1.0858212156461235 0.45773003690263303 0.04773731504137696 105.38227969260303 442374.826020724 0.009092827193671087 0.00980451237405393 1.708495724730392e-09 8.767386103624553 0.09168603986167734 SNSLVS(ph)TFTMEK ddPTM_A549_PD325901_60min_R1 1 SNSLVSTFTMEK 12 0 Q9HB21 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 S(0.001)NS(0.291)LVS(0.487)T(0.194)FT(0.026)MEK 85.86399999999999 0.0001278 16879000.0 4684.1 4489.6 5325.2 5480.3 6992.5 5878.8 5598.6 4978.2 5269.3 6434.5 6061.4 True False 5159.626383747831 4867.954348252571 5686.600095028979 5818.805684335658 6501.370922815422 5830.925001909931 5811.6577866714715 4878.905895677651 5047.849645484347 6028.224571881362 5315.886226380405 0.9706051190755127 0.9157371209517343 1.0697369832350596 1.094606888962274 1.2230079136291476 1.0968867190899638 1.0932622594198442 0.9177972755447223 0.9495781945885317 1.1340018042459101 1.0 12.376094512227025 -8.250701138911433 24.728995968318298 0.9711449828246167 1.0689040266294993 0.07822464021764641 0.09023934599108212 687.1930237232671 1582531.6767550143 0.013389353634355882 0.01719544938435867 5.614341958032852e-09 8.250701138911433 0.09775904380488265 SNSS(ph)SEAVLGQEELSAQAK ddPTM_A549_PD325901_60min_R1 1 SNSSSEAVLGQEELSAQAK 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.001)NS(0.241)S(0.616)S(0.142)EAVLGQEELSAQAK 314.48 1.9025999999999996e-163 14736000.0 3068.8 3249.5 2871.2 3471.3 4629.1 3702.3 4268.9 4386.1 5083.2 6700.8 5856.8 True False 3380.342316868845 3523.3467691212436 3066.0568979281907 3685.7143171057014 4303.967985528051 3672.1496962936535 4431.355325531711 4298.615794671116 4869.570781304167 6277.710344434316 5136.450729314145 0.6581085841195662 0.6859496868164655 0.596921309967981 0.7175605318417693 0.8379264617423376 0.7149196769933749 0.8627271162636884 0.8368844599518037 0.9480419530772733 1.2221883699977707 1.0 12.326556090785607 -7.762035972276148 0.4420416430486083 1.001189405698401 0.6247165593103927 0.7654748160950158 0.08364008983857776 0.2408955184060216 0.09949084831640985 0.015642712733134792 0.03410356266297772 1.7296730857972248e-08 7.762035972276148 -0.37647284638800826 SNSS(ph)SPVDKLNQQPR ddPTM_A549_MK2206_60min_R1 1 SNSSSPVDKLNQQPR 15 1 D4PHA4;Q86WP2-4;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 S(0.044)NS(0.142)S(0.471)S(0.343)PVDKLNQQPR 51.089 0.0061687 7605000.0 2255.5 1923.5 1764.7 2169.0 3930.7 2221.2 2446.6 2089.4 4027.1 3700.5 3669.7 True False 2636.173258319371 2021.397934067231 2014.960995595029 2700.4050973701087 3352.499236966806 2456.2459096867697 2891.1155506966406 2385.578848519139 3114.968279957245 2864.554479891132 2758.4122114323904 0.9556850304655724 0.73281213217134 0.7304785656197116 0.9789708319076214 1.2153728232032144 0.8904564370425581 1.0481085962113472 0.8648376912747039 1.129261343553762 1.0384794803397508 1.0 11.429622350996238 -6.407398328487947 5.183310397737372 1.0437911433822953 0.8012010197848007 0.43666098764879313 0.10803348394017376 0.14116444315620497 5.475720585567894 0.015024258063334068 0.035492781585374715 3.913827419627159e-07 6.407398328487947 -0.24259012359749454 SNSSS(ph)EAVLGQEELSAQAK ddPTM_A549_PD325901_60min_R1 1 SNSSSEAVLGQEELSAQAK 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 SNS(0.03)S(0.245)S(0.724)EAVLGQEELSAQAK 354.05 1.1275999999999994e-230 16511000.0 4781.2 4768.8 4485.9 3966.5 5739.7 5828.5 4587.8 5623.6 6758.0 8728.3 8763.3 True False 5266.583904266593 5170.683512105056 4790.340149908082 4211.501696424901 5336.56327289005 5781.034628433017 4762.391239540487 5511.432886371142 6473.984761578051 8177.193648419003 7685.469655135681 0.6852650703977851 0.6727869270357261 0.6232982972884449 0.5479823466104818 0.694370482527894 0.7522031688160972 0.6196617062118126 0.7171237586876975 0.8423668366515407 1.063980994701441 1.0 12.907917709631068 -9.11971014135049 0.6071913151747341 0.9838047324509736 0.6393461332153824 0.8518993402285879 0.058904852317122725 0.1705453506449196 0.1413995251472639 0.020770758443866114 0.015928119255052442 7.590840370581683e-10 9.11971014135049 -0.3444585992355912 SNSSS(ph)PVDKLNQQPR ddPTM_A549_MK2206_60min_R1 1 SNSSSPVDKLNQQPR 15 1 D4PHA4;Q86WP2-4;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 S(0.013)NS(0.049)S(0.189)S(0.749)PVDKLNQQPR 56.817 0.0032094999999999997 6347300.0 2139.1 2013.8 2104.9 1986.0 3637.6 2545.9 2423.2 2480.7 3711.5 3596.3 4195.1 True False 2500.127784026142 2116.293818364747 2403.406471144089 2472.5700891549272 3102.5138586995813 2815.305448168352 2863.4640735911466 2832.3468218251287 2870.8511760476053 2783.893332261177 3153.3408911300694 0.7928504625233099 0.6711275093402054 0.7621778152512954 0.7841112567657812 0.9838815294047473 0.8928008564146787 0.9080731111709781 0.8982050845793886 0.910415738470563 0.8828393213343665 1.0 11.622665425301417 -2.891689278490731 0.185010633266681 1.0008669969008035 6.902566217839934e-08 0.5481149336442688 0.06354786445350356 15.149141463308451 0.21572271638261323 0.05902702933022643 4.058108408159286 0.001283248370659019 2.891689278490731 -1.0008669278751414 SNSSS(ph)PVDKLNQQPR ddPTM_A549_PD325901_60min_R1 2 SNSSSPVDKLNQQPR 15 1 D4PHA4;Q86WP2-4;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 S(0.145)NS(0.053)S(0.178)S(0.624)PVDKLNQQPR;S(0.011)NS(0.04)S(0.15)S(0.798)PVDKLNQQPR 60.062 0.0015995 30931000.0 6369.3 6572.8 6379.3 5785.2 7755.5 7429.9 6347.5 6738.1 7844.1 7406.5 8037.0 True False 7015.906647169162 7126.712923243608 6812.237659847214 6142.53866485752 7210.780435022525 7369.393357775497 6589.057585985275 6603.70330956281 7514.43975559254 6938.852325998802 7048.49995074064 0.9953758524793558 1.0110963996665348 0.9664804862673511 0.871467504828751 1.0230234071669153 1.0455264821277523 0.9348170010688461 0.9368948507786977 1.0661048177779926 0.9844438354957616 1.0 12.78310054303981 -8.762503110137617 24.99999717867359 1.0312161630133887 0.9735485753521589 0.1156443336384666 0.0497341176584589 33.26312479132849 781755.1429020052 0.008856096076107533 0.009692171283411698 1.7278136069743286e-09 8.762503110137617 -0.05766758766122981 SNST(ph)TQVSQPR ddPTM_A549_PD325901_60min_R1 1 SNSTTQVSQPR 11 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.001)NS(0.284)T(0.679)T(0.036)QVSQPR 147.73 1.6909e-11 31167000.0 1048.8 1151.3 1024.9 1047.4 1108.1 958.04 1240.9 1173.2 1084.4 1165.4 1087.0 True False 1155.2734039142472 1248.324091487702 1094.4558772243681 1112.0955191820103 1030.2708787374715 950.2380398771492 1288.1231285465356 1149.799605642405 1038.8264391025807 1091.8164451115924 953.3058910607284 1.2118601329829115 1.3094685590358741 1.1480636881479713 1.1665673417213431 1.0807348285565563 0.9967818816474892 1.3512170024599988 1.2061182212595383 1.0897094509157967 1.1452949733655222 1.0 9.896795401503583 -14.999999857026179 0.07071838132298928 0.34429644618562566 1.3947949375470803 0.05749396154715958 0.10444652923302787 158.5080372790157 0.8380314478033254 16.616664157614114 2.195930715663138 1.0000003292094437e-15 14.999999857026179 1.0504984913614546 SNSTSSMS(ph)SGLPEQDR ddPTM_A549_PD325901_60min_R1 1 SNSTSSMSSGLPEQDR 16 0 P42684-2;P42684-6;P42684-3;P42684 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 S(0.004)NS(0.027)T(0.21)S(0.21)S(0.21)MS(0.301)S(0.038)GLPEQDR 57.019 0.0033454 2809500.0 469.92 588.81 449.58 489.21 644.22 441.09 662.67 426.05 410.7 596.38 589.22 True False 517.6259324631798 638.4310851288744 480.0912023441616 519.4273906234783 598.9722096383488 437.4979092829231 687.8882694769377 417.5520985202409 393.4397072477218 558.7244650211524 516.7496753733233 1.0016957090282126 1.2354745741594186 0.9290595141590018 1.005181842152529 1.1591148251919543 0.8466341250564984 1.3311827800955582 0.80803553135971 0.7613738837155208 1.0812284780198549 1.0 9.013321767112059 SNT(ph)ISKPYISNTLPSDAPK ddPTM_A549_MK2206_60min_R1 2 SNTISKPYISNTLPSDAPK 19 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 S(0.092)NT(0.907)IS(0.001)KPYISNTLPSDAPK;S(0.376)NT(0.624)ISKPYISNTLPSDAPK 200.12 5.2053e-55 32157000.0 4561.7 5098.200000000001 5646.4 4555.5 6570.9 5638.299999999999 4506.1 5233.6 8643.2 7370.2 7622.3 True False 5331.60343714275 5357.676603827167 6447.144424280485 5671.597704504164 5604.329314418596 6234.941163599364 5324.800042096841 5975.4788272278 6685.529000354218 5705.2667011737985 5729.472545221979 0.9305574631977203 0.9351081729670095 1.1252596767667555 0.9898987489230436 0.9781579840350672 1.08822253957721 0.929370024913967 1.0429369859204536 1.1668663995832442 0.9957752055085128 1.0 12.484186615368829 -8.520672675726486 24.967410370815514 1.0801718993045137 1.0006670676905118 0.08629608051188242 0.07334523582370506 115.68707940914115 1309308.4624987529 0.013568250111510175 0.015501811541354693 3.0152777586872287e-09 8.520672675726486 -0.0795048316140019 SNT(ph)ISKPYISNTLPSDAPK ddPTM_A549_PD325901_60min_R1 3 SNTISKPYISNTLPSDAPK 19 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 S(0.162)NT(0.832)IS(0.006)KPYISNTLPSDAPK;S(0.144)NT(0.855)IS(0.001)KPYISNTLPSDAPK;S(0.159)NT(0.823)IS(0.018)KPYISNTLPSDAPK 193.77 4.5488999999999995e-45 35922600.0 11350.2 11287.3 12415.8 12322.800000000001 13517.2 12317.4 13014.4 13151.4 12838.1 12556.9 14006.500000000002 True False 12502.463948424378 12238.520383782796 13258.410850270564 13083.95136889065 12567.79850380846 12217.091178220948 13509.670113752945 12889.085009926295 12298.559302695347 11764.05519102604 12283.789294518945 1.0178018890313436 0.9963147437935663 1.07934209325672 1.0651396776016615 1.0231206513299802 0.9945702327922737 1.0997966335828466 1.049275976727917 1.0012023983660312 0.9576894318982815 1.0 13.584468050447079 -8.769351835070852 24.088908870559422 1.0005677923402918 1.0411456578779112 0.31957995639388825 0.03361400236485963 112.34426666654701 342023.6496581364 0.005389738392909432 0.0057909565333289495 1.7007800968220677e-09 8.769351835070852 0.04057786553761944 SNT(ph)LDIMDGR ddPTM_A549_MK2206_60min_R1 6 SNTLDIMDGR 10 0 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 S(0.204)NT(0.796)LDIMDGR;S(0.2)NT(0.8)LDIMDGR;S(0.051)NT(0.949)LDIMDGR;S(0.067)NT(0.933)LDIMDGR;S(0.001)NT(0.999)LDIMDGR;S(0.028)NT(0.972)LDIMDGR 128.46 1.5419999999999998e-06 60557000.0 7604.959999999999 8091.36 7627.88 7089.370000000001 10022.15 8817.32 8065.570000000001 7938.45 12358.259999999998 11713.71 12620.25 True False 8888.491324579241 8503.175663007138 8709.628083571943 8826.265968253918 8547.905011261828 9750.362949936676 9530.979666570873 9063.74959798351 9559.133842085977 9067.574775475085 9486.293623819283 0.9369825220527634 0.8963643758249672 0.918127609048786 0.9304230206507532 0.9010795311878982 1.0278369336422748 1.0047105903025588 0.9554574165009186 1.00767846971169 0.955860648536871 1.0 13.211628808684843 -7.2567932794087975 24.99036769198249 1.0012999020010969 0.9163247855606937 0.707358297205372 0.0237105119918272 116.7124769286831 627770.8734947314 0.0027771354583057076 0.004715308026010604 5.5361356199923734e-08 7.2567932794087975 -0.08497511644040312 SNT(ph)LDIMDGR ddPTM_A549_PD325901_60min_R1 4 SNTLDIMDGR 10 0 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 S(0.023)NT(0.977)LDIMDGR;S(0.186)NT(0.814)LDIMDGR;S(0.041)NT(0.959)LDIMDGR;SNT(1)LDIMDGR 128.61 1.5231999999999999e-06 59372300.0 10965.92 11067.990000000002 11202.89 11465.08 12736.140000000001 12470.29 12033.92 12993.239999999998 13891.64 11910.029999999999 12784.31 True False 12079.172125716364 12000.728360414278 11963.18548385023 12173.25195251411 11841.597463697746 12368.736092751475 12491.877410813704 12734.07963520041 13307.822680279385 11158.028673221566 11211.920916418203 1.077350813991936 1.0703543531814412 1.0670058746429356 1.0857418673626373 1.0561613439814292 1.1031772507991282 1.1141603213166795 1.13576252723592 1.1869351183874337 0.9951933086579554 1.0 13.452745852980616 -7.276978743886551 22.754323968048816 1.0973761520705125 1.0718302684681869 0.015315538242716586 0.05242146529837259 866.5589747829624 1268903.980103349 0.010260182318502526 0.016446255211676496 5.2847111663780766e-08 7.276978743886551 -0.02554588360232568 SNT(ph)LER ddPTM_A549_PD325901_60min_R1 2 SNTLER 6 0 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 SNT(1)LER;SNT(1)LER 78.264 0.04677 285630000.0 9194.9 9929.0 10576.8 9403.8 11662.099999999999 10524.099999999999 11051.0 12180.0 10573.9 11348.0 11469.3 True False 10128.359479072384 10765.751675828536 11294.605251465202 9984.651368420651 10842.994328060891 10438.395218854235 11471.551852339242 11937.060344974841 10129.515754727756 10631.485343338205 10058.64880988299 1.0069304208255982 1.0702979972072184 1.1228749969248195 0.9926434014288644 1.0779772246752717 1.0377532227388364 1.1404664850280908 1.186745910966316 1.0070453742032563 1.0569496504234626 1.0 13.296148898787836 -8.949447643728472 24.99979706202772 1.003107867499124 1.079464850195674 0.15574011885793582 0.05612386809611462 95.6735458515188 47313.752184764126 0.009304007795918615 0.009903627004921782 1.1234463983334198e-09 8.949447643728472 0.07635698269655 SNT(ph)LNEKPALPVIR ddPTM_A549_MK2206_60min_R1 2 SNTLNEKPALPVIR 14 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.029)NT(0.971)LNEKPALPVIR;S(0.01)NT(0.99)LNEKPALPVIR 169.49 6.581600000000001e-23 109658000.0 1541.92 2646.8 3598.3 5154.0 13545.4 15957.599999999999 16309.2 16933.8 28385.0 25951.0 27223.0 True False 1802.158399675374 2781.5108146031425 4108.593047231595 6416.730231371848 11552.889603482878 17646.222640202406 19272.37053029577 19334.21800758752 21955.842821530718 20088.65107624775 20462.777783422058 0.08807007625012644 0.13593026538442823 0.20078373966217705 0.31358060471000027 0.5645807097041567 0.8623571455923503 0.9418257254354443 0.944848163441972 1.0729649246016963 0.9817167194437596 1.0 14.320714381052557 -6.985932457056022 1.0072174971946595 1.030986616758478 0.09988093851009772 0.9917972443057743 0.03378602956810962 0.03237500797942697 0.06392562922543153 0.006078551939929895 0.01670623956066717 1.0329220367923782e-07 6.985932457056022 -0.9311056782483803 down SNT(ph)LNEKPALPVIR ddPTM_A549_PD325901_60min_R1 4 SNTLNEKPALPVIR 14 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 Q9UMZ2-6 SYNRG Synergin gamma 1 SNT(1)LNEKPALPVIR;S(0.01)NT(0.99)LNEKPALPVIR;S(0.006)NT(0.994)LNEKPALPVIR;S(0.048)NT(0.952)LNEKPALPVIR 202.96 5.3145e-32 364646500.0 26497.2 25270.1 30083.9 29753.1 33364.6 35168.9 31430.1 32333.199999999997 35095.8 33529.8 33696.1 True False 29187.17623779234 27399.700012423647 32125.574363186784 31590.881412807194 31021.18559762138 34882.496138611634 32626.189654710663 31688.288961095295 33620.84557493208 31412.722705768527 29551.693317177018 0.9876651034689508 0.9271786803667688 1.0870975824763887 1.069004103208018 1.0497261617015434 1.1803890817429425 1.1040379075586366 1.0723002780580555 1.137696077652168 1.0629753892143223 1.0 14.850953178998015 -5.767439130153448 24.997608176327418 1.0773608765642748 0.9574218810296388 0.5211158317395015 0.04665316718851922 98.43536849568397 410133.55010792264 0.008170999277843153 0.026401024681676325 1.7082871333917053e-06 5.767439130153448 -0.11993899553463605 SNT(ph)LPSDVGR ddPTM_A549_MK2206_60min_R1 2 SNTLPSDVGR 10 0 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 S(0.012)NT(0.737)LPS(0.252)DVGR;S(0.012)NT(0.933)LPS(0.055)DVGR 124.21 2.4589e-05 11974000.0 1777.8600000000001 1763.33 1584.53 1580.39 2538.7 1907.19 1931.34 2138.98 3013.2 3142.5 2493.7 True False 2077.9193034962 1853.0759652086156 1809.2401803990422 1967.585620946404 2165.2605929955544 2109.007579909738 2282.2394783301093 2442.1869653515205 2330.7150110916464 2432.607067438963 1874.4454673812443 1.1085514834417804 0.9885995604862895 0.9652135588274545 1.0496894442574978 1.155147285250503 1.1251368026492639 1.2175544810693197 1.302885044057034 1.2434157470304263 1.2977742536503432 1.0 10.872248139051466 -6.657588084634468 4.321433877019657 1.1428608755728173 1.016218165027125 0.34558534343594083 0.09450656047193036 0.2707428151014097 9.002703515304468 0.01620777044630159 0.0345618032247595 2.1999454662397786e-07 6.657588084634468 -0.12664271054569243 SNT(ph)LPSDVGR ddPTM_A549_PD325901_60min_R1 2 SNTLPSDVGR 10 0 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H4P8;H0YFK8 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 S(0.011)NT(0.559)LPS(0.43)DVGR;S(0.003)NT(0.735)LPS(0.262)DVGR 89.301 0.00072669 9911500.0 1862.44 1634.81 1992.01 1825.8200000000002 2071.47 1809.78 1822.95 1894.04 1851.25 2252.69 2123.56 True False 2051.5135377441384 1772.5811760661932 2127.1997775292357 1938.596754661922 1925.9770933835491 1795.0417517106464 1892.3233598065156 1856.2618863543632 1773.44840039529 2110.4547689535207 1862.375582355954 1.1015573642502978 0.951785017404401 1.1421969863019101 1.040926853330812 1.03415074361485 0.9638451925147512 1.0160804177923535 0.9967172593651293 0.9522506723116673 1.1332057770451114 1.0 10.862928332940967 -7.066699003569954 2.8892983407921786 0.9808634317796239 1.0569593779461612 0.007843957252847922 0.06527284071165562 0.2154808873492689 3.5418870965460094 0.006582537912604295 0.012393255669138856 8.576320382428066e-08 7.066699003569954 0.07609594616653736 SNT(ph)PES(ph)IAETPPAR ddPTM_A549_PD325901_60min_R1 1 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 S(0.184)NT(0.83)PES(0.982)IAET(0.004)PPAR 56.872 0.0028284000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SNT(ph)PESIAET(ph)PPAR ddPTM_A549_PD325901_60min_R1 2 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 S(0.109)NT(0.842)PES(0.057)IAET(0.992)PPAR;S(0.157)NT(0.843)PES(0.001)IAET(0.999)PPAR 79.514 0.0021831 13513000.0 2614.8 2333.79 2584.7 2255.26 2455.3999999999996 3079.8 2254.33 2431.8999999999996 2812.6000000000004 2588.6 2594.4 True False 2880.252571085977 2530.4666737367183 2760.113285063736 2394.5622881329195 2282.941174670145 3054.7191299044366 2340.119761766711 2383.3938467113567 2694.396203079967 2425.1553542267607 2275.3052472566283 1.2658752378647846 1.1121438219279556 1.213073845099091 1.052413644727485 1.0033560013201408 1.3425535468647822 1.0284860743797917 1.04750509830936 1.1841910909881843 1.0658593422358644 1.0 11.151844390044719 -10.935676614431278 1.0168571284761547 0.9941971205163419 1.138176149899314 0.12636533244505788 0.10269469514837291 0.7528195871692939 1.286375203305175 0.08321477039470952 0.016531991804713566 1.1596405295122494e-11 10.935676614431278 0.14397902938297202 SNT(ph)PESIAETPPAR ddPTM_A549_MK2206_60min_R1 2 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.002)NT(0.818)PES(0.179)IAET(0.001)PPAR;S(0.003)NT(0.929)PES(0.067)IAET(0.001)PPAR 87.447 8.494700000000001e-05 65254000.0 2110.2799999999997 2304.6 1898.8899999999999 1651.42 2133.87 1733.27 1438.07 1178.05 2800.1000000000004 2746.2 3222.0 True False 2466.443672607492 2421.8942962575193 2168.1811553949356 2056.017974135061 1819.9805497204954 1916.6834809484908 1699.3487043204111 1345.0421951268172 2165.8818208408734 2125.831512681268 2421.888477323803 1.018396881483545 1.000002402643132 0.895244011314173 0.8489317296752532 0.751471658072209 0.7914003881245739 0.7016626571501751 0.5553691706783686 0.8942946139428278 0.8777578045337253 1.0 11.241916718267314 -3.219568779756054 14.100585861511819 0.8871885553957389 0.8503135506837501 0.0 0.14027743076933838 0.0 0.0 0.020958123964472324 0.0 0.0006031581774530962 3.219568779756054 -0.03687500471198879 SNT(ph)PESIAETPPAR ddPTM_A549_PD325901_60min_R1 2 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.04)NT(0.919)PES(0.04)IAETPPAR;S(0.003)NT(0.987)PES(0.009)IAETPPAR 119.0 2.9277e-06 63991000.0 1851.1599999999999 3000.7 2635.2 2292.8 2897.5 2517.4300000000003 2392.3 2674.7 3027.3999999999996 2358.5 2698.0 True False 2039.0884004480351 3253.5795199575664 2814.040518744907 2434.4210486733928 2693.989595832347 2496.928884731256 2483.3402856167922 2621.3510102384407 2900.16890606709 2209.5839074958726 2366.1631040311386 0.8617700094190974 1.375044482104624 1.1892842526158647 1.0288475230325271 1.138547715177666 1.0552649056514054 1.049522022123506 1.1078488231739176 1.225684273888891 0.9338256960103434 1.0 11.208333809424543 -11.122562639058184 1.4922625431140504 1.0003165350299488 1.1334067756981092 0.1445639169281766 0.1257389351189387 0.6515089000285809 2.6068294070229716 0.08480313716572728 0.01850222826969109 7.541146207231392e-12 11.122562639058184 0.13309024066816044 SNT(ph)PILVDGK ddPTM_A549_MK2206_60min_R1 2 SNTPILVDGK 10 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.01)NT(0.99)PILVDGK;S(0.053)NT(0.947)PILVDGK 124.42 2.2936999999999997e-05 42788000.0 9947.8 10350.599999999999 8957.6 9073.7 9942.2 10089.3 9089.6 10038.4 13138.7 12390.900000000001 12944.7 True False 11626.745439640627 10877.401329012886 10227.922374421727 11296.756907333865 8479.715550352705 11156.943029264692 10741.062662311851 11461.373941310669 10162.805428192554 9591.787084146208 9730.173734454827 1.1949165304695417 1.1179041223586474 1.0511551647021837 1.16100259004952 0.8714865511934063 1.1466334860761667 1.1038921765885266 1.177920790943908 1.0444628950668955 0.985777576630663 1.0 13.248249849545013 -14.999983351789869 0.016477787661360165 3.423473021767096e-06 1.8949065179375955 0.18650183647777796 0.08452117960673769 4172.214731245257 5.345853192866037 390.8408677574332 240.93750853789123 1.0000383346552276e-15 14.999983351789869 1.8949030944645737 SNT(ph)PILVDGK ddPTM_A549_PD325901_60min_R1 2 SNTPILVDGK 10 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.153)NT(0.847)PILVDGK;S(0.052)NT(0.948)PILVDGK 115.83 9.0531e-05 86393000.0 11947.6 12204.5 11526.7 11363.6 14268.6 10705.3 10877.0 11340.4 11168.5 11525.6 13103.2 True False 13160.511556641744 13233.016046696483 12308.971177677933 12065.503763391913 13266.422759997733 10618.119586130899 11290.930187122789 11114.206825628298 10699.126784504946 10797.871649028806 11491.589468028467 1.1452298738356863 1.1515392264501754 1.0711286904151562 1.0499421160980533 1.1544462841199774 0.923990507637981 0.9825385964697098 0.9671601005718042 0.9310397673247651 0.939632561628685 1.0 13.48829073880831 -7.26208809750222 24.999836513384047 0.9651975434513905 1.1105260354521693 0.8159883915513269 0.03701610491658661 21.71408494518482 836797.8655126535 0.006003308468053311 0.009947414603586733 5.469050108682152e-08 7.26208809750222 0.1453284920007788 SNT(ph)PILVDGKDVMPEVNK ddPTM_A549_MK2206_60min_R1 3 SNTPILVDGKDVMPEVNK 18 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.163)NT(0.837)PILVDGKDVMPEVNK;S(0.129)NT(0.871)PILVDGKDVMPEVNK;S(0.472)NT(0.528)PILVDGKDVMPEVNK 113.54 2.7779000000000003e-10 71436200.0 6721.0 8322.8 8029.6 7235.5 9726.1 7445.700000000001 6944.4 7795.799999999999 12201.6 11678.4 11281.4 True False 7855.340487326308 8746.39497044697 9168.318020190314 9008.197824813938 8295.403574086766 8233.59903194435 8206.10759023042 8900.87852363621 9437.957081951363 9040.24132899895 8479.917029199485 0.9263463852626707 1.0314245929918775 1.0811801564355419 1.062297873174394 0.9782411249452829 0.9709527821549466 0.9677108351383347 1.0496421713782338 1.1129775267202489 1.066076625262967 1.0 13.049834433631217 -8.428640600782511 10.027237202752085 1.0548097640221208 1.006923917396026 0.22391068026736838 0.04846967095094042 0.7589792600943105 76.79470263417367 0.009691605526801924 0.011715312410550474 3.72700005546932e-09 8.428640600782511 -0.04788584662609474 SNT(ph)PILVDGKDVMPEVNK ddPTM_A549_PD325901_60min_R1 3 SNTPILVDGKDVMPEVNK 18 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.156)NT(0.844)PILVDGKDVMPEVNK;S(0.011)NT(0.989)PILVDGKDVMPEVNK;S(0.197)NT(0.803)PILVDGKDVMPEVNK 120.85 1.1590000000000001e-10 144899000.0 11971.9 12548.8 12132.7 13085.6 15625.2 15088.400000000001 13712.400000000001 15154.9 16067.8 14445.5 15620.2 True False 13187.27847475303 13606.331416017436 12956.097981851975 13893.867792446163 14527.739856013672 14965.525072943079 14234.232885713192 14852.623630710943 15392.526243279628 13533.408664715553 13699.01442460606 0.9626443235993785 0.9932343301703407 0.9457686210316222 1.014223896829403 1.0604952594194703 1.0924526837538124 1.0390698516344195 1.0842111096717133 1.123622894770568 0.9879111186573358 1.0 13.74178448179505 -6.567834198096993 3.195079629500016 1.0628808615554042 0.9701099708421008 0.49328368311872417 0.038667126894511676 0.1760556422354192 3.6759622027594387 0.006658856591792249 0.015308418757928684 2.7049908594559064e-07 6.567834198096993 -0.09277089071330336 SNT(ph)PMGDKDDDDDDDADEK ddPTM_A549_MK2206_60min_R1 5 SNTPMGDKDDDDDDDADEK 19 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 S(0.172)NT(0.828)PMGDKDDDDDDDADEK;S(0.012)NT(0.988)PMGDKDDDDDDDADEK;S(0.008)NT(0.992)PMGDKDDDDDDDADEK;S(0.001)NT(0.999)PMGDKDDDDDDDADEK;S(0.005)NT(0.995)PMGDKDDDDDDDADEK 229.77 1.9817999999999995e-75 348124000.0 29521.299999999996 29204.699999999997 28105.8 24741.1 38460.9 35929.399999999994 33778.200000000004 36400.9 41048.3 37560.1 38631.8 True False 34503.773713510825 30691.094486640617 32091.62506374725 30802.670610670168 32803.35255884614 39731.42525999453 39915.261707897174 41560.8390480809 31750.925590665505 29075.24732337764 29038.457876560424 1.1882095757351478 1.0569119963982037 1.1051421945395838 1.060754353471842 1.1296520186536734 1.3682346848062263 1.3745654771879745 1.4312343728703456 1.0934094959737708 1.0012669215071133 1.0 14.825677218802072 -8.97889406449475 16.70292276934836 1.041201545744539 1.2113758841985256 0.3095126864655572 0.1235507416908353 4.008509656782929 3172.7444408664282 0.02463588411203851 0.02533778174881627 1.0497984700562107e-09 8.97889406449475 0.17017433845398666 SNT(ph)PMGDKDDDDDDDADEK ddPTM_A549_PD325901_60min_R1 5 SNTPMGDKDDDDDDDADEK 19 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 S(0.407)NT(0.593)PMGDKDDDDDDDADEK;S(0.009)NT(0.991)PMGDKDDDDDDDADEK;S(0.011)NT(0.989)PMGDKDDDDDDDADEK;SNT(1)PMGDKDDDDDDDADEK;S(0.001)NT(0.999)PMGDKDDDDDDDADEK 270.18 1.6659999999999997e-111 420571000.0 63611.0 62680.5 64607.9 58638.4 67010.6 52737.3 59915.0 58262.4 61430.6 70202.4 76265.6 True False 70068.7418920568 67962.80571223384 68992.58061286392 62260.36079053116 62304.00663002001 52307.82491379607 62195.09811174601 57100.31072603137 58848.88551266593 65769.80848318347 66885.4146874711 1.0475937425141209 1.0161080114371266 1.0315041169324997 0.9308510843724155 0.9315036308161027 0.7820512911254224 0.9298753458038487 0.8537034717185858 0.8798463130959617 0.983320635604931 1.0 16.02940402461411 -6.28392075051797 4.5300270091894586 0.9214069630966429 1.031165323182336 0.4584554596067053 0.05755881587965448 0.17525789203807002 9.251440570430544 0.009468574574833641 0.023850581011131546 5.200908933725244e-07 6.28392075051797 0.10975836008569295 SNT(ph)PTPR ddPTM_A549_MK2206_60min_R1 1 SNTPTPR 7 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8;H7C4P7;H7C4W5;Q5JSY7;Q04727-2;Q04727-4;Q04727;Q04727-3;H0Y5S0;H7C4E4 H0YKH0;H7C4P7;Q04727-4 TLE3;TLE4 Transducin-like enhancer protein 3;Transducin-like enhancer protein 4 1 S(0.053)NT(0.931)PT(0.017)PR 80.688 0.016696000000000003 135720000.0 3564.5 3251.3 3138.7 2510.9 4052.6 3071.5 2752.0 3055.6 4152.9 5094.9 4847.1 True False 4166.100456342006 3416.7772825748825 3583.8148562781853 3126.070612718585 3456.4679084467593 3396.5240913033117 3252.0027775350086 3488.740657382538 3212.274780818567 3943.9585514382725 3643.431296845501 1.1434551983864862 0.937791055792144 0.9836372815321283 0.8580018005074367 0.9486848047441939 0.9322322323585565 0.8925659666893149 0.9575425946423376 0.8816619606906733 1.0824846772472339 1.0 11.831082071120765 -5.261226304115289 8.610375748836848 0.9370566804657723 1.1446189415068957 0.4635802913283694 0.059663386655551674 0.04536848806178156 54.41799474545254 0.006605037139148424 0.05383534752596524 5.479913407260354e-06 5.261226304115289 0.2075622610411234 SNTACDGDKES(ph)EVEDVETDSGNSPEDLRK ddPTM_A549_MK2206_60min_R1 2 SNTACDGDKESEVEDVETDSGNSPEDLRK 29 2 Q7Z3K6-4;Q7Z3K6-3;Q7Z3K6;Q7Z3K6-2 Q7Z3K6-4 MIER3 Mesoderm induction early response protein 3 1 SNTACDGDKES(1)EVEDVETDSGNSPEDLRK;SNTACDGDKES(1)EVEDVETDSGNSPEDLRK 201.75 4.553699999999999e-78 84470000.0 4183.8 4993.1 4449.5 4225.9 4475.2 4495.0 3542.3 3909.9 6652.9 5238.0 6331.9 True False 4889.923155910702 5247.227462745563 5080.506006630071 5261.245689707859 3816.9040082615948 4970.657916460485 4185.890057726112 4464.140298566565 5146.028772498214 4054.7321620510097 4759.514478450212 1.0273995757447414 1.1024711630784154 1.067442074109286 1.105416469164943 0.8019523893757439 1.0443623901064432 0.8794783746700813 0.9379402707521911 1.0812087652633549 0.8519213840843924 1.0 12.216598695325956 SNTACDGDKES(ph)EVEDVETDSGNSPEDLRK ddPTM_A549_PD325901_60min_R1 1 SNTACDGDKESEVEDVETDSGNSPEDLRK 29 2 Q7Z3K6-4;Q7Z3K6-3;Q7Z3K6;Q7Z3K6-2 Q7Z3K6-4 MIER3 Mesoderm induction early response protein 3 1 SNTACDGDKES(1)EVEDVETDSGNSPEDLRK 182.26 5.704099999999999e-67 56187000.0 7752.9 8129.5 9158.8 8713.0 9116.0 10782.0 9313.7 8447.6 7959.1 10683.0 9610.1 True False 8539.968700616671 8814.601495482735 9780.37124433851 9251.182221341278 8475.723608492726 10694.194966760706 9668.137950152195 8279.105990986005 7624.606705515816 10008.47355682782 8428.118623443157 1.0132710610956992 1.0458563635975127 1.1604453711809426 1.0976568596944918 1.0056483525181 1.2688709597672683 1.1471288412172882 0.9823195852936066 0.904662955776116 1.1875098113817288 1.0 13.040994904494669 -8.36301765404593 5.247121780601199 0.9546344253106837 1.1072134778646547 0.029088205122716038 0.10116370424853688 0.15302315895235044 6.425262948621174 0.012744857885298149 0.015450083931044268 4.334932565532033e-09 8.36301765404593 0.15257905255397108 SNTAGS(ph)QSQVETEA ddPTM_A549_MK2206_60min_R1 2 SNTAGSQSQVETEA 14 0 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 1 S(0.01)NT(0.025)AGS(0.85)QS(0.115)QVETEA;S(0.003)NT(0.008)AGS(0.737)QS(0.253)QVETEA 100.31 3.1796e-05 22283000.0 1813.4099999999999 1734.31 1691.44 2163.4 3906.0 2696.1 2000.4700000000003 2514.1000000000004 4635.700000000001 2581.7 3289.3 True False 2119.4692743821456 1822.5789711630575 1931.3116259926642 2693.4330971187173 3331.43257424691 2981.3995124736616 2363.929504496896 2870.4813741083403 3585.7213516917377 1998.4921769314797 2472.476029938294 0.857225408343005 0.7371472762907004 0.7811245094420044 1.0893667176162425 1.3474074304089627 1.2058355577053135 0.9560980474119675 1.1609743994889121 1.4502552535489 0.8082958753623818 1.0 11.271740819132102 -6.3547632946568395 3.705218225076298 1.2011301451582568 0.7842044040330765 0.37777397686278946 0.17824327950027177 0.14901888330486118 3.787709359247803 0.02565031953120401 0.06391943381055439 4.418111839453197e-07 6.3547632946568395 -0.4169257411251803 SNTAGS(ph)QSQVETEA ddPTM_A549_PD325901_60min_R1 4 SNTAGSQSQVETEA 14 0 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 1 S(0.003)NT(0.004)AGS(0.97)QS(0.023)QVETEA;S(0.008)NT(0.006)AGS(0.921)QS(0.065)QVETEA;S(0.002)NT(0.002)AGS(0.86)QS(0.136)QVETEA;S(0.002)NT(0.005)AGS(0.821)QS(0.172)QVETEA 123.68 1.1778e-06 32564700.0 3367.85 3089.12 2915.34 3038.1000000000004 4413.92 4957.66 3850.13 3507.45 5903.9 3391.79 3520.42 True False 3709.7516527198704 3349.450983667584 3113.192503763576 3225.7565369742847 4103.90148639735 4917.286460666937 3996.6488040219783 3437.4911582087066 5655.779614365293 3177.6318005534968 3087.430657781057 1.201565982824721 1.0848667889029908 1.0083441051275412 1.0448029104215226 1.3292287151630582 1.5926791580805904 1.2944902240798433 1.1133824656257183 1.8318725961055637 1.029215601181232 1.0 11.592191019481247 -6.828420452007114 5.223089361003042 1.3854976458585224 1.0794560063315994 0.13553465059433945 0.23785693674466699 0.2747787292847302 14.204761154374069 0.04447458113860024 0.0861777549774995 1.484497764714915e-07 6.828420452007114 -0.306041639526923 SNTEPQSPPIAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SNTEPQSPPIASPK 14 0 A0A2R8Y7M0;P82094;P82094-2;F8WF45 A0A2R8Y7M0 TMF1 TATA element modulatory factor 1 SNTEPQSPPIAS(1)PK 119.56 2.5734e-06 4312200.0 2121.0 2104.4 2392.6 2201.7 2568.2 1776.2 1578.2 2342.6 2857.3 2710.4 2765.3 True False 2478.9729465286573 2211.504971380857 2731.9066572565675 2741.11659883807 2190.421182073968 1964.1563050538641 1864.9385114483111 2674.6707239116176 2210.1261121705033 2098.118757545448 2078.5996916025797 1.1926168162843294 1.0639398150183543 1.3143014830095998 1.3187323224919254 1.053796549149478 0.9449420747000684 0.897209077333434 1.2867656695597185 1.0632764553460115 1.0093904882319207 1.0 11.021396227299197 -6.8628665270668625 7.626507789258079 1.0343088869331287 1.2171655283942246 0.3912188818776441 0.11164095863386261 0.19174774298008895 12.803841295093607 0.016259084804873297 0.030858935910883355 1.3713031478264292e-07 6.8628665270668625 0.18285664146109593 SNTGQKT(ph)QPDVMS(ph)QNAR ddPTM_A549_PD325901_60min_R1 2 SNTGQKTQPDVMSQNAR 17 1 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 2 S(0.059)NT(0.079)GQKT(0.864)QPDVMS(0.998)QNAR;S(0.075)NT(0.174)GQKT(0.753)QPDVMS(0.998)QNAR 42.321999999999996 0.038175 25273000.0 2142.44 2100.8 2431.1 2507.2 2479.3 2339.0 2790.6000000000004 2817.0 3434.0 2942.6 2920.0 True False 2359.9389316190322 2277.8417887582414 2596.0890653919 2662.0640497356653 2305.1625211206697 2319.9519594929793 2896.797810074913 2760.8127251062506 3289.6809220566784 2756.8037338127424 2560.858511405085 0.921542100474808 0.8894836550374042 1.0137573215505313 1.0395201600868809 0.900152238342867 0.9059274259631291 1.1311822957706106 1.0780809298173428 1.2846008115660028 1.0765154425888788 1.0 11.322411830243654 -7.769819603157421 24.762332970709895 1.1324701365095844 0.9479119111081643 0.5295523055811482 0.07842973875388644 125.92487518265594 372089.3059763533 0.0171245105370722 0.02387340805464512 1.6989492138762276e-08 7.769819603157421 -0.18455822540142008 SNTIS(ph)KPYISNTLPSDAPK ddPTM_A549_PD325901_60min_R1 1 SNTISKPYISNTLPSDAPK 19 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 S(0.076)NT(0.398)IS(0.526)KPYISNTLPSDAPK 223.68 3.1338e-75 23730000.0 7626.0 8947.6 9305.2 8945.9 10477.0 10220.0 10013.0 9932.3 10846.0 11566.0 9996.9 True False 8400.185906035516 9701.645653604934 9936.70682871322 9498.467925386996 9741.131663687836 10136.771708430197 10394.050194323847 9734.192484761377 10390.180337980986 10835.720786134098 8767.344675570383 0.9581220103553212 1.1065660142959723 1.1333770025491512 1.0833916398717436 1.111069773591866 1.1561963266569901 1.185541412930436 1.1102782934820676 1.1851000185874436 1.2359181926914664 1.0 13.097924251227223 -5.26125323795662 24.351073152554953 1.105795567139522 0.958121946031333 0.3186021529578855 0.06369287780816633 11.095105672174643 1449844.4964588138 0.009716980399052624 0.07781781245984545 5.47957356747946e-06 5.26125323795662 -0.14767362110818905 SNTISKPYISNT(ph)LPSDAPK ddPTM_A549_MK2206_60min_R1 1 SNTISKPYISNTLPSDAPK 19 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 SNTISKPYIS(0.006)NT(0.99)LPS(0.004)DAPK 128.12 8.216200000000001e-17 7446200.0 1458.4 1739.5 2122.4 2097.7 2040.9 1505.4 1320.6 1969.8 2768.4 2243.8 2266.3 True False 1704.5422655433258 1828.0331199947746 2423.38823428962 2611.6365941693325 1740.6863135638819 1664.700428796355 1560.535925876719 2249.0251822594983 2141.3618202263765 1736.9240216132207 1703.5151633019657 1.0006029310824385 1.0730947157825426 1.4225809587701623 1.5330867904381507 1.021820263806673 0.9772149169307216 0.9160681157964532 1.3202261011285377 1.2570253945234757 1.019611717600739 1.0 10.734299073847557 -10.962547182808201 1.2446790349984382 1.0005627887599822 1.1795537918826497 0.09413984552891552 0.18799341022667718 0.92271853291756 2.555324638071395 0.1388062909994604 0.03263864372369449 1.0900660585254314e-11 10.962547182808201 0.17899100312266758 SNTISKPYISNT(ph)LPSDAPK ddPTM_A549_PD325901_60min_R1 2 SNTISKPYISNTLPSDAPK 19 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 SNTISKPYIS(0.006)NT(0.963)LPS(0.031)DAPK;SNTISKPYIS(0.004)NT(0.966)LPS(0.03)DAPK 141.53 6.1776e-21 21250600.0 6956.6 6610.2 7507.0 7028.2 7898.200000000001 7083.1 8436.2 8141.1 7665.5 8053.799999999999 7644.4 True False 7662.828910821754 7167.264752498915 8016.470163258196 7462.315951799696 7343.457679310804 7025.417581994322 8757.244207465777 7978.719373930596 7343.345692494307 7545.281693529892 6704.187261844195 1.1429914785396158 1.0690728752894854 1.1957407885789004 1.1130828630444543 1.0953539023447203 1.0479148788069148 1.3062350237897182 1.1901098615398462 1.0953371983339097 1.1254580755034471 1.0 12.710846731724537 -9.730313832659292 1.0503995435722544 1.016527108124401 1.1408782505892294 0.08154160590855708 0.07590598087850672 0.36165053876244674 0.8214340336815409 0.02141899936298903 0.013811368284294826 1.8607420293968128e-10 9.730313832659292 0.12435114246482848 SNTPESIAET(ph)PPAR ddPTM_A549_MK2206_60min_R1 2 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SNTPESIAET(1)PPAR;SNTPESIAET(1)PPAR 129.38 1.1348e-08 55257000.0 2501.55 2877.96 2906.4 2567.3 4044.2999999999997 2713.48 2973.8 2693.8 3888.6 4621.4 4523.9 True False 2923.750482974429 3024.4358712389558 3318.5712232092646 3196.2886152504766 3449.3888274518126 3000.6186525377543 3514.1009665093065 3075.65439941651 3007.838308818191 3577.422530298307 3400.4907767117184 0.8598025035085382 0.8894115790437731 0.975909491046563 0.9399492088436994 1.014379703975371 0.8824075257276124 1.033409939111039 0.9044736778820716 0.8845306475810462 1.0520312405486605 1.0 11.731527263387303 SNTPESIAET(ph)PPAR ddPTM_A549_PD325901_60min_R1 2 SNTPESIAETPPAR 14 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SNTPESIAET(1)PPAR;SNTPESIAET(1)PPAR 224.55 6.281100000000001e-47 63736000.0 5522.6 5805.799999999999 5416.6 5644.8 6465.9 5082.4 5385.8 6547.799999999999 6843.6 6367.0 7374.700000000001 True False 6083.250286476755 6295.075141456874 5784.2030486618305 5993.466475729051 6011.7574901440485 5041.010619464348 5590.759566222846 6417.198992350273 6555.98729126007 5964.986533400985 6467.65865207503 0.9405645247720449 0.9733159215873606 0.894327199349965 0.9266825598172466 0.9295106333750756 0.779418162065036 0.8644178468554696 0.9921981566376316 1.0136569729382212 0.9222791205109794 1.0 12.659027823406591 -8.35534113953758 5.857749649565793 1.0061255499469781 0.9012429304479038 0.3132808119665016 0.05362967848423435 0.14643383192094026 7.470361819426205 0.008238523544881858 0.009979103398655953 4.412237287164572e-09 8.35534113953758 -0.10488261949907429 SNTPILVDGKDVMPEVNK ddPTM_A549_PD325901_60min_R1 2 SNTPILVDGKDVMPEVNK 18 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YX90;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YXP8;K7ERC6;K7EP41;K7EPY4 P06744-2 GPI Glucose-6-phosphate isomerase 0 ; 121.74 2.5407e-10 7622100.0 7790.200000000001 7373.7 8778.7 7992.4 10280.1 10205.0 10063.900000000001 10495.1 10697.0 9929.3 10513.7 False True 8581.055369157866 7995.1075770024 9374.475372611525 8486.072395942612 9558.061240419715 10121.893863456971 10446.887221677394 10285.766997253328 10247.442289819532 9302.362303455062 9220.581551835498 0.930641448255471 0.8670936352610917 1.0166902510336122 0.9203402570907613 1.0366006945101025 1.0977500504230184 1.1329965645819575 1.1155225881827149 1.1113661575694889 1.0088693702408917 1.0 13.17064203048917 -6.858952197417404 4.139965639396862 1.0685522649864139 0.9346313599063902 0.629620459483919 0.051367278433756096 0.1360001721516316 4.294182767784963 0.008720965561871607 0.017125749758277995 1.3837186758322965e-07 6.858952197417404 -0.13392090508002363 SNTPT(ph)PR ddPTM_A549_MK2206_60min_R1 1 SNTPTPR 7 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8;H7C4P7;H7C4W5;Q5JSY7;Q04727-2;Q04727-4;Q04727;Q04727-3;H0Y5S0;H7C4E4 H0YKH0;H7C4P7;Q04727-4 TLE3;TLE4 Transducin-like enhancer protein 3;Transducin-like enhancer protein 4 1 SNT(0.384)PT(0.616)PR 74.376 0.019725 106260000.0 2124.7 2438.6 1994.2 1903.9 2187.8 1877.9 1699.7 2019.8 3335.9 3267.9 3054.6 True False 2483.2974160723415 2562.7143238972444 2277.0075465606647 2370.3555854693177 1865.9775181611353 2076.6181315508666 2008.5134887268362 2306.1128353780764 2580.323976337655 2529.679120344882 2296.0585173287673 1.081547964623048 1.116136328650153 0.9917027503330941 1.0323585255252934 0.8126872656242281 0.9044273549120179 0.8747658100036314 1.004378946779199 1.1238058424310553 1.1017485404892506 1.0 11.164943695658359 -14.212808104605097 13.353025906645113 0.2914944414477637 1.0208703116641495 0.0 0.09992284837935662 0.0 0.0 0.0 0.014509044948152111 6.126210218837209e-15 14.212808104605097 0.7293758702163858 SNTPT(ph)PR ddPTM_A549_PD325901_60min_R1 2 SNTPTPR 7 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8;H7C4P7;H7C4W5;Q5JSY7;Q04727-2;Q04727-4;Q04727;Q04727-3;H0Y5S0;H7C4E4 H0YKH0;H7C4P7;Q04727-4 TLE3;TLE4 Transducin-like enhancer protein 3;Transducin-like enhancer protein 4 1 S(0.012)NT(0.307)PT(0.682)PR;S(0.02)NT(0.341)PT(0.639)PR 74.376 0.019725 423690000.0 7491.799999999999 6453.299999999999 7310.9 7054.799999999999 6970.3 5993.9 5387.6 6568.1 6350.1 6929.6 7548.0 True False 8252.362020828332 6997.142238858318 7807.061638013099 7490.558973386714 6480.73017422958 5945.0876656712135 5592.628066207844 6437.094092925228 6083.227380067593 6492.063873387066 6619.643850714246 1.2466474340515947 1.0570269936959436 1.1793778961644188 1.1315652537074934 0.9790149319786023 0.8980978130764167 0.8448533172376655 0.9724230242735309 0.9189659621055332 0.9807270632371841 1.0 12.692537884076721 -6.7779755855022765 3.8700382123329864 0.9477218280905024 1.151568902428754 0.7560108947045634 0.05810395539386047 0.08977994525262742 2.930199895311618 0.008742705981170459 0.01788813654505157 1.6673409419193567e-07 6.7779755855022765 0.20384707433825167 SNVGGLLS(ph)PQRK ddPTM_A549_PD325901_60min_R1 2 SNVGGLLSPQRK 12 1 Q99504-2;Q99504-4;Q99504-5;Q99504-3;Q99504;B1APR7 Q99504-2 EYA3 Eyes absent homolog 3;Eyes absent homolog 1 SNVGGLLS(1)PQRK;SNVGGLLS(1)PQRK 68.944 0.0016335999999999998 23126000.0 3930.3999999999996 4328.799999999999 4277.3 4718.5 4783.200000000001 4651.9 4499.8 5365.9 5248.1 4378.9 5221.0 True False 4329.411314592446 4693.603167924919 4567.583299494376 5009.951028508987 4447.244533144188 4614.016468732529 4671.042351385044 5258.872915032881 5027.540607759364 4102.415506692249 4578.850098645875 0.9455237060223489 1.0250615475079607 0.9975393823975957 1.0941504789577199 0.9712579440981028 1.0076801750066144 1.020134367964226 1.1485138848699399 1.0979919629267145 0.8959488557848785 1.0 12.160769619824203 -8.02245135927638 24.734605504255267 1.0566201233108685 1.0099776364669948 0.0031030216358219898 0.06895538155878263 1047.3040839116327 1153811.1763436792 0.009036140705212142 0.01171223445491475 9.496173498247567e-09 8.02245135927638 -0.04664248684387373 SNVSDAVAQSTR ddPTM_A549_PD325901_60min_R1 2 SNVSDAVAQSTR 12 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 0 ; 155.47 2.6433e-13 49403000.0 21853.0 22688.0 18290.2 24739.0 27484.0 23337.0 21571.0 21742.0 23787.0 23743.0 24946.0 False True 24071.500472671683 24599.997383542926 19531.482959907433 26267.071843654525 25553.618654652706 23146.951209357703 22391.89620910412 21308.338753730957 22787.315111520733 22243.862927994276 21877.80014572305 1.1002706082118354 1.1244273747674784 0.8927535140559228 1.2006267389177858 1.1680159103952805 1.0580109085548421 1.0234985263580796 0.9739708111327904 1.041572505450256 1.0167321567905807 1.0 14.417180059251564 -7.607114230990335 4.0471473359288535 1.0163630606314586 1.0946799798350733 0.22916959461260933 0.07459581692483391 0.2804954120967408 8.832964588592406 0.011331317476488198 0.017132787779537917 2.4710741013718048e-08 7.607114230990335 0.07831691920361461 SNVSS(ph)PATPTAS(ph)SSSSTTPTRK ddPTM_A549_PD325901_60min_R1 1 SNVSSPATPTASSSSSTTPTRK 22 1 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 S(0.006)NVS(0.147)S(0.81)PAT(0.038)PT(0.042)AS(0.175)S(0.159)S(0.144)S(0.131)S(0.12)T(0.109)T(0.099)PT(0.02)RK 65.581 0.00024669 10021000.0 1734.7 1707.9 1953.3 1266.8 2779.0 1976.1 1610.3 1726.8 1923.2 2372.4 1858.8 True False 1910.8054669813553 1851.8307268755702 2085.862684147095 1345.047358888458 2583.8126270295425 1960.0072967738665 1671.5808476899717 1692.357619351607 1842.3745921081536 2222.6062591236832 1630.1793839040329 1.1721442964180209 1.1359674555819226 1.2795295442589696 0.8250916262155599 1.5849866907540582 1.202326146512751 1.0253968760706498 1.0381419591374457 1.1301667842810925 1.363412076651882 1.0 10.670815011099638 -9.859089601321543 0.32814016618455816 0.9742207526701113 1.189026209126924 0.0 0.20432855666946537 3.291282337976729 0.7147574453622878 0.2646539216016468 0.08883118986385313 1.3832809583788598e-10 9.859089601321543 0.2148054564568126 SNVSS(ph)PATPTASSSSSTTPTR ddPTM_A549_MK2206_60min_R1 2 SNVSSPATPTASSSSSTTPTR 21 0 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVS(0.027)S(0.971)PAT(0.001)PTASSSSSTTPTR;S(0.002)NVS(0.072)S(0.918)PAT(0.006)PTASSSSSTTPTR 133.09 1.348e-17 7459900.0 1432.22 1139.84 1184.72 895.68 1567.01 1086.8000000000002 1215.0700000000002 1082.4299999999998 2176.6000000000004 2229.6 2027.5700000000002 True False 1673.9437215828734 1197.8529873497234 1352.73111050113 1115.1216402086031 1336.5049048055944 1201.8044546405463 1435.8324908791656 1235.8677673028474 1683.6035753159704 1725.931811475548 1524.06841091478 1.0983389653605737 0.7859574929649944 0.8875789963320546 0.731674268833695 0.8769323576514483 0.7885502028870188 0.9421050135258342 0.8109004546331695 1.1046771675461955 1.1324503540097686 1.0 10.573711947252098 -8.760187174045681 24.99999765112212 1.0494308891216373 0.8592970457742625 0.47613429731793755 0.09840108977650652 20.95247032002944 418310.18721217074 0.015594553835161857 0.017209651902435962 1.737052025478891e-09 8.760187174045681 -0.19013384334737482 SNVSS(ph)PATPTASSSSSTTPTR ddPTM_A549_PD325901_60min_R1 2 SNVSSPATPTASSSSSTTPTR 21 0 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVS(0.285)S(0.712)PAT(0.002)PTASSSSSTTPTR;SNVS(0.006)S(0.328)PAT(0.328)PT(0.328)AS(0.009)S(0.002)SSSTTPTR 129.12 2.0648000000000003e-17 18614800.0 2471.05 2477.34 2251.3 2418.72 2246.82 2743.33 2697.1000000000004 2314.69 3130.1200000000003 3016.91 2902.25 True False 2721.909176909137 2686.114136025487 2404.0867561666696 2568.1188410883237 2089.011114308208 2720.9892300281635 2799.7396164097518 2268.5216921108217 2998.5719416855127 2826.421787730918 2545.291648878566 1.069389898052896 1.0553266605848357 0.9445230990428504 1.008968399444447 0.8207354607982189 1.06902846721986 1.0999680989969434 0.8912619868573071 1.1780857973610444 1.110451051444818 1.0 11.31361525973859 -8.765642117358961 24.998889085254305 1.0840960610770338 0.9958718835629113 0.20293068292558936 0.08849896377463438 154.7854462416491 920698.3934696976 0.016986626586574436 0.01839672709682866 1.7153702851048722e-09 8.765642117358961 -0.08822417751412248 SNVSSPATPTASSSSST(ph)TPTR ddPTM_A549_PD325901_60min_R1 2 SNVSSPATPTASSSSSTTPTR 21 0 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSS(0.001)S(0.017)S(0.017)T(0.482)T(0.482)PTR;SNVSSPATPTASSSSS(0.002)T(0.499)T(0.499)PTR 362.69 6.401599999999997e-257 66273000.0 3738.7999999999997 4609.2 4036.2999999999997 4202.9 5475.6 4966.6 4782.2 5366.3 5177.0 5433.4 4758.4 True False 4118.360223640913 4997.633459988805 4310.227590243646 4462.503587521545 5091.012745794511 4926.153656270982 4964.189237920252 5259.26493671909 4959.428693502449 5090.334196730152 4173.146965982861 0.9868716000685962 1.1975694843068536 1.0328482618460815 1.06933775011936 1.2199457117838346 1.1804409709090542 1.1895553351908095 1.2602635324347908 1.1884145787169522 1.2197831128938625 1.0 12.02692001364133 -3.886180470849036 13.757435282807133 1.1169475833363565 0.5433832763244272 0.0 0.09656360639215329 0.0 0.0 0.013745733263241288 0.0 0.00012996294054744897 3.886180470849036 -0.5735643070119293 SNVSSPATPTASSSSSTT(ph)PTR ddPTM_A549_MK2206_60min_R1 2 SNVSSPATPTASSSSSTTPTR 21 0 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSSSST(0.016)T(0.817)PT(0.166)R;SNVSSPATPTASSSSST(0.004)T(0.996)PTR 283.09 1.7292999999999995e-127 47961000.0 2475.2799999999997 2390.2 2350.42 1784.8 2714.5 2751.3 2052.63 2432.89 3256.2 2890.7 3026.0 True False 2893.046749214264 2511.850970630358 2683.7448990006633 2222.076080122715 2315.2006458764054 3042.4407398348694 2425.56630132692 2777.7596079131436 2518.6758990829085 2237.6888623216587 2274.560686648613 1.2719145135129113 1.1043235669088143 1.1798959310050114 0.9769253874675775 1.0178671685773626 1.3375948848907908 1.0663889143801224 1.2212290594039743 1.1073241148795112 0.9837894743616263 1.0 11.151372211777483 -10.030921169326069 0.8220492461158391 1.0081363132928596 1.139891573505336 0.23843136013400812 0.1022944170423686 0.6614608740536312 0.8997782386726921 0.04419491606916211 0.020012780220567388 9.312769002340915e-11 10.030921169326069 0.13175526021247652 SNVSSPATPTASSSSSTT(ph)PTRK ddPTM_A549_MK2206_60min_R1 2 SNVSSPATPTASSSSSTTPTRK 22 1 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSSSS(0.003)T(0.111)T(0.882)PT(0.004)RK;SNVSSPATPTASSSSS(0.001)T(0.047)T(0.938)PT(0.014)RK 220.77 1.1942999999999998e-74 101824000.0 11266.0 11394.7 10891.9 10371.3 14815.3 12069.1 11557.4 11065.6 18799.3 18751.9 18217.4 True False 13167.425372744858 11974.641559301215 12436.535200272856 12912.268965585348 12635.988995709238 13346.244151179802 13657.229978591247 12634.18268697874 14541.288566313293 14515.832766239837 13693.516805337875 0.9615809846315052 0.8744752520136665 0.9082060786185303 0.9429476115698789 0.9227716426202215 0.9746396298996981 0.9973500725005513 0.9226397328445096 1.0619104480629074 1.06005148075485 1.0 13.741205390502257 -7.785072622676105 0.8052470915416263 1.0263130863184378 0.9142294328007201 0.5697787070961846 0.03766612133265443 0.3089727535762895 0.4040559255243441 0.007871615704738839 0.014101943030234885 1.640315456892023e-08 7.785072622676105 -0.11208365351771765 SNVSSPATPTASSSSSTT(ph)PTRK ddPTM_A549_PD325901_60min_R1 2 SNVSSPATPTASSSSSTTPTRK 22 1 Q12888;Q12888-3;Q12888-2;A6NNK5;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPT(0.001)AS(0.036)S(0.036)S(0.036)S(0.13)S(0.13)T(0.13)T(0.478)PT(0.023)RK;SNVSSPATPT(0.002)ASS(0.002)S(0.013)S(0.068)S(0.124)T(0.124)T(0.662)PT(0.003)RK 126.59 1.8036e-16 210360000.0 2959.2 2827.1000000000004 3161.0 2973.3 3467.5 3366.3 3365.0 3487.2 3381.1 3782.9 3422.7 True False 3259.6158055520964 3065.3496387083133 3375.5244686371593 3156.953988145762 3223.9547622255955 3338.8859688932066 3493.056916398656 3417.645060344524 3239.0041250919703 3544.0470484062466 3001.729598282939 1.0859125376971577 1.0211944608407653 1.1245264965132236 1.051711649827358 1.0740323725593985 1.1123207003066262 1.1636814050128859 1.1385586037794673 1.0790459363644074 1.180668322167835 1.0 11.551578306661815 -10.15006254705661 0.9280020282133988 1.0068045299674437 1.0942225454503236 0.0 0.0645386414532912 0.3709724752016794 0.6350945971964922 0.017542572550662713 0.00787089151735753 7.078438334304531e-11 10.15006254705661 0.08741801548287986 SNVVS(ph)PTKNEDNGAPENSVEKPHEKPEAR ddPTM_A549_MK2206_60min_R1 4 SNVVSPTKNEDNGAPENSVEKPHEKPEAR 29 3 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 S(0.002)NVVS(0.499)PT(0.499)KNEDNGAPENSVEKPHEKPEAR;S(0.003)NVVS(0.808)PT(0.189)KNEDNGAPENSVEKPHEKPEAR;S(0.05)NVVS(0.885)PT(0.065)KNEDNGAPENSVEKPHEKPEAR;S(0.01)NVVS(0.949)PT(0.04)KNEDNGAPENSVEKPHEKPEAR 173.23 6.1294e-58 295507000.0 17192.329999999998 18333.38 17025.0 15154.800000000001 22150.2 16769.01 14138.29 16542.260000000002 26096.399999999998 26446.4 28397.7 True False 20093.974991887335 19266.470733802707 19439.40100300638 18867.726680324824 18891.93492219252 18543.49550783203 16707.034284009966 18887.176013546556 20185.6070673875 20472.139872177508 21345.767353351395 0.9413564131594677 0.9025897460077851 0.9106911305277715 0.8839095061795702 0.8850436065127631 0.8687200230785147 0.782686047657447 0.8848206626116523 0.9456491646911094 0.9590725661573969 1.0 14.381662406130118 -9.036567389932843 1.9043364155010702 0.9807744272154799 0.8807289396782397 0.49895114745854385 0.038463830570014554 0.17598101175597602 1.295439196336487 0.00830809439275848 0.00814269251460732 9.192478230822441e-10 9.036567389932843 -0.10004548753724019 SNVVS(ph)PTKNEDNGAPENSVEKPHEKPEAR ddPTM_A549_PD325901_60min_R1 2 SNVVSPTKNEDNGAPENSVEKPHEKPEAR 29 3 Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2 Q71RC2-6 LARP4 La-related protein 4 1 S(0.006)NVVS(0.972)PT(0.022)KNEDNGAPENSVEKPHEKPEAR;SNVVS(0.5)PT(0.5)KNEDNGAPENSVEKPHEKPEAR 229.31 3.986499999999999e-105 402570000.0 15475.4 17243.2 16789.3 15252.5 19096.9 18788.7 17748.9 17768.5 17133.2 20403.0 21042.6 True False 17046.45121561264 18696.344979015652 17928.722860262544 16194.612284059209 17755.599624728482 18635.691056573633 18424.344102070754 17414.0933283814 16413.151186307932 19114.751098002238 18454.49360003173 0.9237019224186858 1.0131052839609485 0.9715098798610068 0.8775430328812364 0.9621287914775377 1.0098186089777934 0.9983662787712082 0.9436234721906138 0.889385075637064 1.0357776004197359 1.0 14.171684529446892 -3.8776689743320976 17.98680463125869 0.9541826250469333 0.6207502593117854 0.0 0.05112613929425869 0.0 0.0 0.006848986056958745 0.0 0.00013253513526710845 3.8776689743320976 -0.3334323657351479 SNYQDKS(ph)LSR ddPTM_A549_PD325901_60min_R1 1 SNYQDKSLSR 10 1 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 SNYQDKS(0.969)LS(0.031)R 44.44 0.0158 10642000.0 3592.5 3430.4 3232.3 3362.7 4059.2 3234.2 3368.3 3303.2 5432.7 4273.1 4574.0 True False 3957.2079553412814 3719.4918469898475 3451.6633153988932 3570.406341754195 3774.0957954797814 3207.861747495592 3496.482499704485 3237.31508468973 5204.382511723153 4003.2957367481913 4011.4269969749503 0.9864838518376239 0.9272241149582796 0.8604577169176506 0.8900589103196114 0.9408362157222 0.7996809489278172 0.8716305948833696 0.8070233079477741 1.2973893119949136 0.9979729756436074 1.0 11.969899826887946 -8.750299030179296 24.999635726523053 1.1404338473498317 0.8846691715957253 0.4992062088616117 0.09245191714770798 125.87015189483417 282460.2473577523 0.019391512333465373 0.02188867124918254 1.7770554106431413e-09 8.750299030179296 -0.25576467575410633 SPAAPGQSPTGS(ph)VCYER ddPTM_A549_MK2206_60min_R1 1 SPAAPGQSPTGSVCYER 17 0 O75534;O75534-4 O75534 CSDE1 Cold shock domain-containing protein E1 1 S(0.002)PAAPGQS(0.301)PT(0.301)GS(0.387)VCY(0.01)ER 44.005 0.056838 2097600.0 825.55 675.37 718.54 810.09 1119.0 540.06 471.52 987.77 1112.2 975.24 1450.9 True False 964.8826572403269 709.7434482614948 820.4397766050049 1008.5620863663219 954.3965823303361 597.2087907371856 557.1890805462599 1127.7894224187557 860.2884758184426 754.9326066664044 1090.601487197116 0.8847252351728486 0.6507816618566699 0.7522819162053078 0.9247760049900186 0.8751102887115702 0.5475957971339587 0.5109007158776716 1.0340985553918636 0.7888201931847847 0.692216740513171 1.0 10.090908312562226 -10.403786921283585 0.5331287145056345 1.0231903942770963 0.7593929573312028 0.0 0.17461924706398257 1.3194231298986894 0.6051732829568129 0.16873765701804253 0.037075412445111366 3.94650882885993e-11 10.403786921283585 -0.2637974369458935 SPAAPYFLGSS(ph)FSPVR ddPTM_A549_PD325901_60min_R1 1 SPAAPYFLGSSFSPVR 16 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 SPAAPYFLGS(0.075)S(0.518)FS(0.407)PVR 107.35 7.275499999999999e-07 6219100.0 4250.7 4372.9 4060.4 4380.4 4949.9 4964.5 4145.2 4932.0 5196.4 4245.9 4732.4 True False 4682.227934800047 4741.419629693882 4335.963161168722 4650.967359389801 4602.2361002279695 4924.070757974732 4302.947854340476 4833.627390920849 4978.013378967767 3977.813149390172 4150.344801155284 1.128153962894049 1.142415836962285 1.0447235998227833 1.120621919917392 1.1088804233679328 1.1864245005870537 1.0367687651259032 1.1646327287254226 1.1994216426505322 0.9584295618722845 1.0 12.019015481905514 -11.017623237757615 1.3211897476779055 1.0004133896422098 1.1318830868017358 0.5390035826887258 0.050856543896268674 0.3104939540664266 0.9702607650155609 0.03605613413253815 0.00826634691197002 9.602332987139857e-12 11.017623237757615 0.13146969715952594 SPAAPYFLGSSFS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 SPAAPYFLGSSFSPVR 16 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 S(0.001)PAAPYFLGS(0.073)S(0.264)FS(0.662)PVR;SPAAPYFLGS(0.271)S(0.197)FS(0.532)PVR 58.81399999999999 0.0062661 6612700.0 3481.5 4360.2 3308.7 3763.7 5276.2 3766.8 3669.3 3881.2 5801.5 5787.1 5500.9 True False 4069.0920854971782 4582.11555608003 3777.9234125490293 4685.806668958916 4500.077969339879 4165.400275800526 4335.964313811484 4431.3719856765 4487.469513091793 4479.790090684496 4134.874712883462 0.9840907809899734 1.108163094229446 0.91367300701464 1.1332403021447923 1.088322689758535 1.0073824638076585 1.04863257411439 1.0717064707835549 1.085273393921638 1.0834161617343194 1.0 12.013627900917143 -6.276946952546112 24.999093414888545 1.0499789029219748 1.012594354669019 0.15584158685026406 0.05663598370675339 1632.3146228801277 2631378.4480419615 0.007981974299034326 0.018616228401602715 5.285098033373283e-07 6.276946952546112 -0.037384548252955785 SPAAPYFLGSSFS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 SPAAPYFLGSSFSPVR 16 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 SPAAPYFLGS(0.015)S(0.05)FS(0.934)PVR 124.46 4.0309e-08 6515500.0 4089.4 3937.2 4848.3 4940.0 4743.4 4912.6 5452.7 4882.9 4978.3 5081.5 5128.0 True False 4504.552877542831 4269.0016616046005 5177.334793196315 5245.1325804459875 4410.239947841644 4872.593414367342 5660.20548233193 4785.5067289390545 4769.07936350459 4760.653222785785 4497.288509070303 1.0016152773961193 0.9492390032337741 1.1512125101056934 1.1662877687004967 0.9806442123841741 1.0834513739868168 1.2585818034391638 1.0640871092186908 1.060434382603235 1.0585607779408233 1.0 12.134839723095016 -9.840931721808529 0.994539023545198 1.0091034303965603 1.0824395527738246 0.039909590334566536 0.08563024775329356 0.8060627110016877 1.6340345674981773 0.02891448299132538 0.016980633155021574 1.442342093454043e-10 9.840931721808529 0.07333612237726439 SPAECREEHS(ph)KTPEER ddPTM_A549_PD325901_60min_R1 2 SPAECREEHSKTPEER 16 2 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SPAECREEHS(0.5)KT(0.5)PEER;S(0.001)PAECREEHS(0.5)KT(0.5)PEER 65.521 0.00057119 71737000.0 2837.3 2647.7 2892.3 2516.4 2802.3 3014.6 2558.6 2638.6000000000004 2311.1 2797.8999999999996 3180.6 True False 3125.340607290136 2870.830971103957 3088.588870812802 2671.8323128409484 2605.4761154101757 2990.050097087444 2655.9689231196417 2585.971053058343 2213.97250406674 2621.240116507397 2789.406363484594 1.120432163704497 1.0291906581576897 1.1072566949171443 0.9578497947868846 0.9340611498983432 1.0719306215936932 0.9521627819769297 0.9270686002981241 0.7937074113866264 0.9397125319642853 1.0 11.445742407582841 -6.634278254277486 0.623392449307082 0.9069753130302179 1.1066974091662913 0.43023049189294493 0.0680616448713886 0.9049332832220971 0.5480413916693379 0.017032198461492315 0.09460783260893213 2.3212490858910954e-07 6.634278254277486 0.1997220961360734 SPAECREEHSKT(ph)PEER ddPTM_A549_MK2206_60min_R1 2 SPAECREEHSKTPEER 16 2 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SPAECREEHS(0.011)KT(0.989)PEER;SPAECREEHS(0.03)KT(0.97)PEER 78.08800000000001 0.00024061 22953000.0 892.36 1069.67 977.0999999999999 1008.53 1010.77 765.8499999999999 713.44 838.7 1164.75 1691.23 1589.37 True False 1042.968551892651 1124.1116340700255 1115.6674725425864 1255.6198952746322 862.0870719589225 846.8917386699136 843.0628130830586 957.588293411028 900.9359847235485 1309.1799683897534 1194.6855646195322 0.8730067415059142 0.9409267738394561 0.9338586700826921 1.0510044922778534 0.7216016477385567 0.7088825409383938 0.7056775757992406 0.8015400217177547 0.7541197545234145 1.095836433586342 1.0 10.222415242570191 -6.757014237894392 24.999830802557216 0.8385261763865551 0.9479410806162426 0.18470446708904542 0.12261808486642171 178.69138334528262 1009503.6959289459 0.018388685467078687 0.03726619763376981 1.7497893226552388e-07 6.757014237894392 0.10941490422968747 SPAECREEHSKT(ph)PEER ddPTM_A549_PD325901_60min_R1 2 SPAECREEHSKTPEER 16 2 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SPAECREEHS(0.002)KT(0.998)PEER;SPAECREEHS(0.001)KT(0.999)PEER 107.45 4.4485e-07 29955000.0 1753.25 1636.67 1669.72 1694.1399999999999 1998.2399999999998 1956.0300000000002 1631.96 1754.38 1295.0 2237.07 2152.1 True False 1931.2386493255667 1774.5979247938646 1783.0372400420254 1798.783180128901 1857.8905159537646 1940.1007401996808 1694.065130842777 1719.3875146155156 1240.5756534838083 2095.821018419245 1887.4053432859191 1.0232241082688338 0.9402314829226561 0.9447028675556296 0.9530455058462802 0.9843622211640187 1.0279194912217533 0.8975629622269998 0.9109794675170892 0.6572915870440429 1.1104244384359323 1.0 10.882188577207716 -8.164386343371621 2.554154841438824 0.8380681688511763 0.9732683004416353 0.0 0.11543488886605457 0.3598096554465479 4.594523311619533 0.02067324079312044 0.02720718106613382 6.848786951737646e-09 8.164386343371621 0.13520013159045896 SPAGPAATPAQAQAAST(ph)PR ddPTM_A549_MK2206_60min_R1 4 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SPAGPAATPAQAQAAS(0.072)T(0.928)PR;SPAGPAATPAQAQAAS(0.396)T(0.604)PR;SPAGPAATPAQAQAAS(0.006)T(0.994)PR;SPAGPAATPAQAQAAS(0.266)T(0.734)PR 243.23 2.7345999999999997e-85 256348800.0 6834.9 8412.1 7285.4 8723.2 10791.7 7475.9 7963.1 7380.1 11840.4 10935.1 11718.9 True False 7988.464022738667 8840.23995901583 8318.579269738784 10860.384391599326 9204.255225678553 8266.994775899208 9409.892193964039 8426.251775608356 9158.56830523348 8464.85331524322 8808.773704813757 0.9068758365733913 1.0035721492294525 0.9443515690717432 1.232905368617248 1.0448963197509178 0.9384955333091958 1.0682408822492269 0.9565748943015345 1.0397097952724759 0.9609570638211997 1.0 13.104725475984415 -5.238934522910792 1.7329654953242224 1.0251201876842502 0.8662126789980876 0.14797245747588117 0.07902310414447482 1.3506950137560554 3.7612497050294165 0.010281149571618435 0.35945626592666075 5.768534270488046e-06 5.238934522910792 -0.15890750868616255 SPAGPAATPAQAQAAST(ph)PR ddPTM_A549_PD325901_60min_R1 2 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SPAGPAATPAQAQAAS(0.115)T(0.885)PR;SPAGPAATPAQAQAAS(0.006)T(0.994)PR 287.39 3.0935999999999993e-127 361370000.0 29444.0 28273.0 27140.3 28733.0 35297.0 30602.0 31106.0 31425.0 36658.0 35766.0 37221.0 True False 32433.13320447281 30655.664934102144 28982.20396588204 30507.7721526224 32817.860488039485 30352.787458060746 32289.75585185632 30798.203722564424 35117.39174162891 33507.72865613624 32643.05296335915 0.993569236335769 0.9391175809600961 0.8878521257926977 0.9345869758832442 1.0053551218042183 0.9298391143785124 0.9891769586656188 0.9434841697292985 1.0757998579681605 1.026488811991564 1.0 14.994488372187448 -8.747653885868687 24.990910603356646 1.0357943774347251 0.9518290468854257 0.5052918345569485 0.03577141789519444 147.31698204105152 267062.06715642725 0.006919968613054546 0.007826944398522207 1.7879118965439907e-09 8.747653885868687 -0.08396533054929944 SPAGSQQQFGYSPGQQQTHPQGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SPAGSQQQFGYSPGQQQTHPQGSPR 25 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 SPAGSQQQFGYSPGQQQT(0.038)HPQGS(0.961)PR;SPAGSQQQFGYSPGQQQT(0.022)HPQGS(0.978)PR 118.86 1.9242999999999998e-17 9193700.0 1068.1299999999999 1170.6399999999999 1451.79 827.77 1366.38 1147.54 1147.17 1195.12 2304.6 1761.97 1970.06 True False 1248.4042307287382 1230.2205757922868 1657.675652402623 1030.5736871600077 1165.3873120326405 1268.9719211245974 1355.5959397910017 1364.5319199014982 1782.6117796899666 1363.939753258689 1480.8397311100339 0.8430380442270666 0.8307587579853198 1.1194159756640465 0.695938706606347 0.7869773396470588 0.8569272517920485 0.9154238040161512 0.9214582045814292 1.203784408427322 0.9210583188744423 1.0 10.532199793185844 -8.60607291521575 5.740480693893171 1.09591331435364 0.8665158759978494 0.2685876231016021 0.11884837315216593 0.14128402600450576 7.605090516435721 0.020062598348670194 0.02277494996636939 2.477006149515816e-09 8.60607291521575 -0.22939743835579052 SPAGSQQQFGYSPGQQQTHPQGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SPAGSQQQFGYSPGQQQTHPQGSPR 25 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 SPAGSQQQFGYSPGQQQT(0.089)HPQGS(0.911)PR;SPAGSQQQFGYSPGQQQT(0.049)HPQGS(0.951)PR 135.32 2.2559e-24 15857700.0 1288.01 1365.2 1185.1 1483.31 1495.77 1671.93 1350.3400000000001 876.87 1509.03 1541.01 1716.06 True False 1418.767827017153 1480.2501951698164 1265.5280125852264 1574.9306898585714 1390.712275326367 1658.3143564066243 1401.7279276344002 859.3801399587925 1445.6107168931817 1443.7103656095874 1504.99549900062 0.9427056944417935 0.9835578884805732 0.8408849152210688 1.0464687043279475 0.9240640761051168 1.101873299626354 0.931383468299544 0.5710184120347582 0.96054155501005 0.9592788593509227 1.0 10.555543456976503 -8.98870922305777 24.996555979469186 0.9825919887150779 0.9183019775977999 0.03666411803308445 0.1288512743479094 141.41761509947625 313091.80722652713 0.023287910593402093 0.023370065228548037 1.0263388698020794e-09 8.98870922305777 -0.06429001111727806 SPAKMT(ph)PTK ddPTM_A549_PD325901_60min_R1 1 SPAKMTPTK 9 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 S(0.093)PAKMT(0.902)PT(0.004)K 50.126999999999995 0.011973000000000001 7061700.0 7855.4 8086.3 7736.0 9263.1 11452.0 11444.0 9839.4 10042.0 13529.0 8844.1 9660.5 True False 8652.874425160166 8767.760879872321 8261.011480347068 9835.260648973534 10647.651027255237 11350.803858246101 10213.84375132628 9841.7044322034 12960.423178364821 8285.682016656452 8472.31974295508 1.0213111270210524 1.0348713393593185 0.9750589839596505 1.1608698617815703 1.2567574584409416 1.3397515913731353 1.2055545660702094 1.1616304307196377 1.5297372586937241 0.9779708825963725 1.0 13.04854132192329 -6.468192952129866 3.250857027165391 1.2521971800520435 1.013512869792805 0.2305577040083462 0.14664659208747474 0.2838750235623254 5.933314846412043 0.02674410186211427 0.06497709960297704 3.4025698378167516e-07 6.468192952129866 -0.23868431025923842 SPALKS(ph)PLQSVVVR ddPTM_A549_MK2206_60min_R1 3 SPALKSPLQSVVVR 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.368)PALKS(0.622)PLQS(0.01)VVVR;SPALKS(0.995)PLQS(0.005)VVVR;S(0.017)PALKS(0.983)PLQSVVVR 88.385 2.1365e-05 101301000.0 3683.5 4045.3 4845.1 4313.0 5367.4 4662.2 4096.7 4243.8 6391.9 6741.1 6138.7 True False 4305.184747071339 4251.188491126678 5532.20803522269 5369.68519361793 4577.862570151786 5155.550909482105 4841.017361456274 4845.371646092426 4944.144855766856 5218.280828102722 4614.291370498956 0.9330110305985744 0.9213090699703659 1.198929064296275 1.163707439011874 0.9921052232245076 1.1173006850940628 1.0491356034443056 1.0500792553046954 1.0714851878181746 1.1308953876353185 1.0 12.171893390872363 SPALKS(ph)PLQSVVVR ddPTM_A549_PD325901_60min_R1 2 SPALKSPLQSVVVR 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.013)PALKS(0.963)PLQS(0.024)VVVR;SPALKS(1)PLQSVVVR 127.59 3.4647e-09 203806000.0 7158.4 6483.2 7007.799999999999 6279.0 8067.599999999999 7573.3 8540.9 7610.799999999999 8370.6 7526.900000000001 8780.0 True False 7885.115498264444 7029.562016792378 7483.391449324737 6666.839569356345 7500.95960770908 7511.6255557196155 8865.928623259815 7458.996623442903 8018.812791545606 7051.650249451214 7700.115661005699 1.024025592004495 0.912916419215742 0.9718544212551924 0.8658103154369503 0.9741359659952683 0.9755211332421122 1.1514020066163333 0.9686863096376784 1.0413886160377859 0.9157849777713872 1.0 12.910664400898995 -7.406122978796522 3.6712502350020504 1.0254408529643104 0.9443679796198701 0.1642285695249861 0.06601365876387502 0.2193598064462356 5.347719803681694 0.008142558512478712 0.013259972117140731 3.925337662100787e-08 7.406122978796522 -0.08107287334444035 SPAPGAPT(ph)RSPST(ph)PAKSPK ddPTM_A549_PD325901_60min_R1 1 SPAPGAPTRSPSTPAKSPK 19 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 S(0.076)PAPGAPT(0.462)RS(0.462)PS(0.217)T(0.687)PAKS(0.096)PK 46.403 0.006530299999999999 16579000.0 2849.2 2426.8 3068.9 3051.7 3519.4 3413.7 3373.4 3048.3 2938.6 3004.1 3969.0 True False 3138.44868652982 2631.314952855341 3277.1740087948697 3240.196578086444 3272.209485270877 3385.8999590086264 3501.7765829953087 2987.4992651549123 2815.1008612567716 2814.420613317085 3480.8381615639687 0.9016359109093683 0.7559429168269833 0.9414899103848048 0.930866770499493 0.9400636666775243 0.9727254764086228 1.0060153389670756 0.8582700851028952 0.808742242699363 0.8085468162221432 1.0 11.765219023476108 -5.783639221150892 24.99624778999761 0.9202265965155142 0.8287893452374864 0.18802049735616855 0.0718530540058971 276.5733356740633 311412.3983200687 0.011177064444807788 0.03478800828785224 1.6457383098195915e-06 5.783639221150892 -0.09143725127802782 SPAPGAPTRS(ph)PS(ph)TPAK ddPTM_A549_MK2206_60min_R1 1 SPAPGAPTRSPSTPAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 S(0.023)PAPGAPT(0.154)RS(0.821)PS(0.524)T(0.479)PAK 42.711000000000006 0.021776 8096000.0 2843.4 2894.1 2737.7 2766.6 3866.8 2582.9 2412.3 2608.7 4173.9 4181.0 4312.0 True False 3323.2964055443576 3041.397328299441 3125.947026486376 3444.417124197395 3297.9988423189848 2856.220763609742 2850.58368468303 2978.4912138086884 3228.518314348672 3236.509196169389 3241.211394854203 1.0253254109930856 0.9383520411929966 0.9644378738915882 1.0626943770671067 1.0175204392885138 0.8812201413781039 0.8794809524638413 0.918943830241183 0.9960838467599853 0.998549246527925 1.0 11.662317402313251 -8.951336107314868 24.98699745066532 0.998272337098952 0.9600830476854579 0.08386341447347767 0.054761846748414375 223.60775584577826 114813.89971985025 0.010195637934033868 0.010852045834841792 1.118571868076629e-09 8.951336107314868 -0.03818928941349409 SPAPGAPTRS(ph)PST(ph)PAK ddPTM_A549_MK2206_60min_R1 1 SPAPGAPTRSPSTPAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 S(0.071)PAPGAPT(0.11)RS(0.819)PS(0.159)T(0.841)PAK 65.78399999999999 0.0014414999999999999 6643300.0 2784.0 3065.4 2664.7 2486.4 4259.7 3074.6 2772.7 2976.9 3587.2 4833.0 4389.4 True False 3253.871137734928 3221.4157666179844 3042.5945287936042 3095.5681116187366 3633.103772790469 3399.9521312456986 3276.4636995898672 3398.8846913738976 2774.7049275812938 3741.2219433357227 3299.3908387228757 0.9862036044794356 0.9763668277217277 0.9221685691445176 0.9382241337667547 1.101143802107654 1.0304787451497404 0.9930510993532724 1.0301552188007934 0.8409749142224457 1.1339129330867241 1.0 11.687983971230913 -8.731159964404817 24.999752963081132 0.9249047599381918 0.9964936386297393 0.0 0.08477246789487056 267.7910234963373 221097.64675547704 0.012294465950941986 0.013939800153605261 1.8571202929110826e-09 8.731159964404817 0.07158887869154751 SPAPGAPTRS(ph)PST(ph)PAKSPK ddPTM_A549_MK2206_60min_R1 1 SPAPGAPTRSPSTPAKSPK 19 2 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 2 S(0.003)PAPGAPT(0.159)RS(0.824)PS(0.173)T(0.539)PAKS(0.302)PK 48.181999999999995 0.0093687 7541300.0 1656.1 2194.1 2361.5 1319.0 2998.3 1661.0 1856.3 1754.3 2919.0 3215.6 3265.3 True False 1935.60919224239 2305.770318241181 2696.3962096093746 1642.1550592121591 2557.254041823994 1836.765917517435 2193.565681663603 2002.977397318428 2257.851160685159 2489.19372666881 2454.4358923045966 0.7886167238309681 0.9394298402620629 1.0985808258685417 0.6690559995316296 1.0418907455850706 0.7483454439679011 0.8937147996169298 0.8160642547635372 0.9199063490573167 1.0141612312927748 1.0 11.261175769939248 -9.734955791733023 0.9945663637931573 0.9870466453784369 0.880572950625826 0.1435147672947078 0.11848307354415032 0.6865472685660196 1.403834522007425 0.03448548742047839 0.02164636385159057 1.8409593892563892e-10 9.734955791733023 -0.10647369475261093 SPAPGAPTRS(ph)PSTPAK ddPTM_A549_MK2206_60min_R1 2 SPAPGAPTRSPSTPAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.001)PAPGAPT(0.005)RS(0.988)PS(0.005)T(0.001)PAK;SPAPGAPTRS(0.997)PS(0.002)TPAK 188.96 6.9311e-35 459360000.0 8919.599999999999 10718.2 10421.599999999999 8582.2 12061.099999999999 9283.1 9050.599999999999 9250.5 13839.0 12873.7 14258.400000000001 True False 10425.010416717112 11263.710598866332 11899.539588424746 10684.839385269603 10286.928167242562 10265.431480376936 10694.976867136027 10561.78670346812 10704.48859634187 9965.522228827042 10717.645768179302 0.97269592989059 1.0509500726650527 1.1102755069359065 0.9969390308637461 0.9598122936460971 0.9578065652118313 0.9978848992088749 0.9854577144941731 0.9987723822822643 0.9298238105997759 1.0 13.3877004185937 -6.48200713255893 24.971823332184975 0.9921979142115649 1.0466607821143672 0.3374190395053013 0.03794735703166119 417.78276468082043 255257.49705265195 0.0045426016143617675 0.01055492424351259 3.296042989348565e-07 6.48200713255893 0.0544628679028023 SPAPGAPTRS(ph)PSTPAK ddPTM_A549_PD325901_60min_R1 4 SPAPGAPTRSPSTPAK 16 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 SPAPGAPT(0.02)RS(0.896)PS(0.077)T(0.007)PAK;S(0.001)PAPGAPT(0.006)RS(0.962)PS(0.027)T(0.004)PAK;SPAPGAPT(0.019)RS(0.843)PS(0.126)T(0.012)PAK;SPAPGAPTRS(1)PSTPAK 156.08 9.1349e-21 706178000.0 18638.6 17603.2 17326.7 17854.300000000003 22157.6 20540.0 19211.300000000003 20548.3 20285.399999999998 19593.0 21706.699999999997 True False 20530.776950987878 19086.683442435766 18502.594055911264 18957.119560942676 20601.326615570266 20372.729050015285 19942.39653432675 20138.448036670496 19432.875182378717 18355.894636237703 19036.91351010849 1.0784719350689993 1.002614390841291 0.9719324535506502 0.99580846185368 1.0821778753489153 1.0701697541041768 1.0475645920089647 1.057863084053888 1.020799678060205 0.9642264029035394 1.0 14.216511970347815 -5.250084558456091 23.57668342516563 1.0200672230383128 1.078472012424071 0.16198085111580252 0.037275512213106286 1072.72280689202 2227263.5921131917 0.0050029866954556905 0.102494046235085 5.622318462828295e-06 5.250084558456091 0.058404789385758216 SPAPGS(ph)PDEEGGAEAPAAGIR ddPTM_A549_MK2206_60min_R1 2 SPAPGSPDEEGGAEAPAAGIR 21 0 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 SPAPGS(1)PDEEGGAEAPAAGIR;SPAPGS(1)PDEEGGAEAPAAGIR 301.82 1.0463999999999996e-146 51009000.0 4518.3 4803.200000000001 4332.6 4370.6 6730.200000000001 5030.200000000001 4620.1 5288.8 6880.4 8194.0 7533.0 True False 5280.878578170874 5047.662363874043 4947.0278288179425 5441.397196203688 5740.196495442028 5562.4924252234805 5459.512366456941 6038.50359627071 5322.000385741064 6342.969709019843 5662.348199776598 0.932630490364267 0.8914432998085834 0.8736707200403397 0.9609789091420361 1.013748411951865 0.9823649533673932 0.9641781419716188 1.0664309899749633 0.9398928144247712 1.1202012813818298 1.0 12.4671847535534 -6.4042428315481965 5.021168828885365 0.98118142160497 0.8990844012062614 0.3887782731282482 0.05384419340382049 0.14317070713326457 5.30736317102488 0.005158341579959806 0.012215238986746048 3.9423680674953725e-07 6.4042428315481965 -0.08209702039870859 SPAPGS(ph)PDEEGGAEAPAAGIR ddPTM_A549_PD325901_60min_R1 2 SPAPGSPDEEGGAEAPAAGIR 21 0 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 S(0.001)PAPGS(0.999)PDEEGGAEAPAAGIR;SPAPGS(1)PDEEGGAEAPAAGIR 254.82 3.278299999999999e-98 53450000.0 4402.4 4438.4 4583.2 4164.5 5297.700000000001 4898.9 4814.0 5063.4 4861.4 5469.5 6116.6 True False 4849.328407124408 4812.439544566157 4894.243513020513 4421.731706734277 4925.6078280728325 4859.004982625115 4997.1994043218765 4962.406514839544 4657.092263973886 5124.154836569289 5364.296976322039 0.9040007345844763 0.8971239970136299 0.9123737061209813 0.8242891335531503 0.9182205701538195 0.9058046197055685 0.9315665084128399 0.9250804973594049 0.8681645114970798 0.9552332503564334 1.0 12.389173394090735 -10.884459118512837 0.9833143021810937 1.0038380718663884 0.8969073850723777 0.4717444263051448 0.031096151737439896 0.3089265414229335 0.49789698731799703 0.024467874895951904 0.005080182738493723 1.3047907868646058e-11 10.884459118512837 -0.10693068679401074 SPAPPPPAVFPAARPEPGDGLS(ph)SPAGGSYETGDRDDGR ddPTM_A549_MK2206_60min_R1 2 SPAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR 38 2 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SPAPPPPAVFPAARPEPGDGLS(0.499)S(0.499)PAGGS(0.002)YET(0.001)GDRDDGR;SPAPPPPAVFPAARPEPGDGLS(0.574)S(0.426)PAGGSYETGDRDDGR 171.37 6.975699999999999e-66 60502000.0 3705.8999999999996 5229.9 4368.9 4280.6 5405.3 4875.4 4660.5 4113.6 6978.0 6003.4 5780.1 True False 4331.3653194439175 5496.079571290984 4988.475714656951 5329.347192163437 4610.187530357612 5391.3115919714 5507.252523510866 4696.715397371652 5397.494141576234 4647.227770457621 4344.741647355467 0.9969212604575255 1.2649957160597356 1.1481639461101925 1.226620044348845 1.061095895808607 1.2408819740186285 1.2675673194200143 1.081011433724816 1.2423049699310778 1.069621199061691 1.0 12.085054676854686 -10.922561890395105 1.1122749706233286 0.9974529411921433 1.1787431030792184 0.2415752308898459 0.08885971754446129 0.42026461746862626 0.9018597934606531 0.060320098627468996 0.013431876313080139 1.1951931890639859e-11 10.922561890395105 0.18129016188707503 SPART(ph)PPSEEDSAEAER ddPTM_A549_MK2206_60min_R1 2 SPARTPPSEEDSAEAER 17 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.049)PART(0.951)PPSEEDSAEAER;S(0.128)PART(0.871)PPS(0.001)EEDSAEAER 180.45 1.3657999999999998e-31 79553000.0 2535.2400000000002 2892.92 2335.93 2220.98 3498.29 2866.52 2946.53 2609.47 4551.66 4033.66 4304.3 True False 2963.126531333008 3040.157271339628 2667.1999991161633 2765.1201997035796 2983.6961751567414 3169.853243758021 3481.876360497902 2979.370363666717 3520.7162775074335 3122.4534045014652 3235.4235173633906 0.9158388431780077 0.9396473923812951 0.8243743005520701 0.8546393338813738 0.9221964788054126 0.9797336351010999 1.0761732866846907 0.9208594632750471 1.088177871803483 0.9650833616509078 1.0 11.659738858211474 -7.318202200210699 2.2996394899851724 1.0341264512444521 0.8842237585520554 0.5035114428235308 0.05469262175970551 0.1540965930825682 1.5933749920676799 0.00839910331513336 0.01476497226645057 4.806155298386749e-08 7.318202200210699 -0.14990269269239676 SPART(ph)PPSEEDSAEAER ddPTM_A549_PD325901_60min_R1 2 SPARTPPSEEDSAEAER 17 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 SPART(0.999)PPS(0.001)EEDSAEAER;S(0.162)PART(0.804)PPS(0.021)EEDS(0.014)AEAER 210.34 2.4545999999999996e-55 56864700.0 3164.64 2742.06 3174.0 3009.34 4005.82 3534.69 3444.82 3203.0499999999997 3345.6899999999996 4085.85 3135.47 True False 3485.9119231151653 2973.1430194604072 3389.406726812512 3195.2200970929825 3724.465022528779 3505.904656562734 3575.914510177834 3139.1626550058845 3205.0822842503803 3827.868733704476 2749.8270673819534 1.2676840534681408 1.0812109076703023 1.2325890478776498 1.1619712872108272 1.3544360904392274 1.274954595563213 1.3004143251751388 1.141585480862478 1.1655577626202744 1.3920398046517526 1.0 11.425125177162911 -9.888288976414902 0.6246416324692811 1.0053498402954093 1.2303565230076867 0.0 0.13480214756510667 0.406762183919979 0.32475335586739296 0.04226068048204984 0.01763618080100295 1.2933349793119648e-10 9.888288976414902 0.22500668271227742 SPAVATSTAAPPPPS(ph)SPLPSK ddPTM_A549_MK2206_60min_R1 2 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.499)S(0.499)PLPS(0.002)K;SPAVATSTAAPPPPS(0.897)S(0.103)PLPSK 216.53 1.9074999999999995e-67 312726000.0 9811.9 9720.900000000001 9743.7 7317.4 12425.8 8844.5 8891.3 8969.599999999999 12899.9 12792.3 11989.7 True False 11467.908842076624 10215.652288679054 11125.503174918851 9110.163328490566 10597.981280357722 9780.419119496057 10506.734119148625 10241.068268247944 9978.093246907323 9902.510545361802 9012.326591113966 1.2724692926001848 1.1335199834803535 1.234476254543244 1.0108558801534184 1.1759428792568603 1.0852268857122223 1.1658181728021402 1.1363401186931574 1.1071606367156723 1.0987740452199708 1.0 13.137683879953492 -14.999999999996403 0.06657243196700928 0.4730295153568203 1.3438078418726764 0.2878323344074669 0.06695720489347172 127.86426873262431 0.6392978756274164 10.582523793045867 1.5662190630213029 1.0000000000082827e-15 14.999999999996403 0.8707783265158562 SPAVATSTAAPPPPS(ph)SPLPSK ddPTM_A549_PD325901_60min_R1 3 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.5)S(0.5)PLPSK;SPAVATSTAAPPPPS(0.499)S(0.499)PLPS(0.002)K;SPAVATSTAAPPPPS(0.5)S(0.5)PLPSK 193.42 2.0211e-45 919536000.0 18706.199999999997 17519.1 18277.4 17920.4 22051.4 21610.8 19138.0 20714.2 22773.0 21676.9 23812.8 True False 20605.239653223387 18995.496040286795 19517.814274934775 19027.302407818686 20502.58573720015 21434.808809837905 19866.307062715445 20301.03903102446 21815.93000524074 20308.21683459712 20883.976561776388 0.9866530730999206 0.9095727523011087 0.9345832302195705 0.9110957557117765 0.981737633948781 1.0263758315583296 0.9512703198047269 0.9720868518968332 1.0446252867938042 0.9724305509788268 1.0 14.350108824202747 -7.390796125203193 0.7822916698118302 1.0179526796500415 0.9331196717360517 0.25034166836895 0.0357570804506135 0.4074251709315892 0.49298769836923 0.006666605717502593 0.015804895959425285 4.066341743344215e-08 7.390796125203193 -0.08483300791398984 SPAVATSTAAPPPPSS(ph)PLPSK ddPTM_A549_MK2206_60min_R1 4 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.158)S(0.798)PLPS(0.043)K;SPAVATSTAAPPPPS(0.216)S(0.784)PLPS(0.001)K;SPAVATSTAAPPPPS(0.207)S(0.777)PLPS(0.015)K;SPAVATSTAAPPPPS(0.105)S(0.894)PLPS(0.001)K 172.95 3.7256e-35 351173800.0 11526.0 12795.099999999999 11927.900000000001 11931.3 15961.8 11459.199999999999 12480.8 11905.2 19065.9 18186.0 17523.0 True False 13471.307016355158 13446.315937709182 13619.455578488103 14854.469035616405 13613.840364468595 12671.804937998657 14748.39980590805 13592.798558145892 14747.504091986002 14077.76996927447 13171.555489802919 1.0227574888010986 1.0208601366876506 1.0340051020573795 1.1277687777359595 1.0335787883980811 0.9620583497377242 1.1197158769384439 1.0319812696889967 1.1196478732829347 1.0688008701913088 1.0 13.685138109723352 SPAVATSTAAPPPPSS(ph)PLPSK ddPTM_A549_PD325901_60min_R1 1 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.186)S(0.808)PLPS(0.006)K 113.31 1.1288000000000001e-11 115720000.0 3546.8 4016.7 3796.9 4902.3 4565.4 4239.8 3354.9 4257.8 4925.4 5035.7 5951.9 True False 3906.8685249838413 4355.201405609876 4054.5804666145004 5205.103937068899 4244.742053774977 4205.272474501213 3482.5725553717234 4172.874838820517 4718.402566539885 4717.74504260206 5219.8540322027175 0.7484631755756566 0.8343531023552457 0.7767612737062525 0.9971742322595954 0.813191715244908 0.8056302817200881 0.667178149788629 0.799423664546346 0.903933814514881 0.9038078485522758 1.0 12.349793748552713 -9.183562165885876 1.5071350966037345 0.9705656627134046 0.8086396913775185 0.33758819026283937 0.07924341089377825 0.2385333559761929 1.1189502493871832 0.01740942278969134 0.015841890789856452 6.55296478512561e-10 9.183562165885876 -0.16192597133588615 SPDDPSR ddPTM_A549_MK2206_60min_R1 2 SPDDPSR 7 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 113.1 0.021159999999999998 38039000.0 9909.2 8753.2 6721.3 6089.4 7440.7 7117.4 6302.8 6984.3 6476.4 11672.8 11957.3 False True 11581.630703320016 9198.700492059937 7674.4814074306505 7581.303273363549 6346.182886635688 7870.558543852246 7447.937175235341 7974.345913521691 5009.505740685628 9035.906372888316 8987.972405308476 1.2885698999787398 1.0234455644998421 0.8538612560601486 0.8434942756261558 0.7060750301021737 0.8756767587763996 0.8286559904029568 0.8872241206272378 0.5573565999965592 1.005333123580968 1.0 13.133779979853502 -5.291316831907072 1.3347378025344903 0.7984211007369388 1.4869869531870166 0.5288465326295385 0.12303459204970169 0.8385848293217902 1.3272699916424375 0.022497926714602223 0.7678423512329572 5.113086831793022e-06 5.291316831907072 0.6885658524500777 SPDDPSR ddPTM_A549_PD325901_60min_R1 2 SPDDPSR 7 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 116.9 0.019591 55027000.0 9444.3 9203.8 7021.5 7331.4 9788.5 6450.2 7191.799999999999 7488.5 8180.200000000001 9258.0 11046.5 False True 10403.07838347381 9979.436526738911 7498.021213709526 7784.243927182537 9100.98952849178 6397.6717097569945 7465.4878845039675 7339.135992885399 7836.414641411773 8673.44830001983 9687.850529532972 1.0738273006752632 1.0300981106507632 0.7739612817984907 0.8035057831923215 0.9394229917924339 0.6603809266311431 0.7706031241652384 0.757560820174958 0.8088909523864782 0.8952913005397035 1.0 13.241960891027416 -5.650843191761558 6.283724518350893 0.8603035567413209 1.0617798205625566 0.426408223809266 0.09500330758297201 0.1911296308780729 9.671793416713712 0.0160970189500649 0.06397646897357875 2.234378831659199e-06 5.650843191761558 0.20147626382123573 SPDEATAADQES(ph)EDDLSASR ddPTM_A549_MK2206_60min_R1 2 SPDEATAADQESEDDLSASR 20 0 C9JME2;Q9Y4F1;Q9Y4F1-2;M0QXT1 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 SPDEATAADQES(0.996)EDDLS(0.002)AS(0.002)R;SPDEAT(0.001)AADQES(0.816)EDDLS(0.092)AS(0.092)R 89.98200000000001 4.0677e-06 8856400.0 0.0 211.97 226.07 0.0 210.79 255.74 246.3 224.8 196.81 270.6 215.77 True False 0.0 222.75836760292742 258.13012538911323 0.0 179.78307023182452 282.8022370535272 291.0495218411599 256.66608842112663 152.23284924098863 209.47127206013795 162.18835405094876 0.0 1.3734547644089883 1.591545378825572 0.0 1.1084832279347794 1.7436654974912047 1.7945155405531248 1.5825186088299488 0.9386176346124533 1.291530907295206 1.0 7.3415264202044686 -6.965656047733198 24.99830607148624 1.1497285755166917 0.8105304549178594 0.16426428700600015 0.5463681920525529 412.8543198188413 300507.1594632152 0.08224951888321026 0.1554365003434351 1.082290763913161e-07 6.965656047733198 -0.33919812059883236 SPDEATAADQES(ph)EDDLSASR ddPTM_A549_PD325901_60min_R1 2 SPDEATAADQESEDDLSASR 20 0 C9JME2;Q9Y4F1;Q9Y4F1-2;M0QXT1 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 SPDEATAADQES(1)EDDLSASR;SPDEATAADQES(1)EDDLSASR 138.3 2.0492e-17 11367200.0 627.0699999999999 597.72 627.42 0.0 632.9300000000001 585.76 599.3 664.37 624.74 342.11 833.11 True False 690.7296847754641 648.0919620985222 670.0004941829569 0.0 588.475180289963 580.9897647681089 622.1066894495433 651.1186191618177 598.4843503918717 320.50911621514217 730.6427515194144 0.945372664464338 0.8870162069640423 0.9170014932600804 0.0 0.8054212254432065 0.7951762520875032 0.8514512573427109 0.8911586651722451 0.8191203555325614 0.43866734535944507 1.0 9.513022361214286 -7.6320980723852365 1.965271330963395 0.9088200247520274 0.6979472750313609 0.0 0.28309460213818705 0.5343906381367682 4.195962148625129 0.040054475003274505 0.06397226755698276 2.3329311802452164e-08 7.6320980723852365 -0.2108727497206665 SPDEATAADQESEDDLS(ph)AS(ph)RTSLER ddPTM_A549_MK2206_60min_R1 1 SPDEATAADQESEDDLSASRTSLER 25 1 C9JME2;Q9Y4F1;Q9Y4F1-2;M0QXT1 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 2 SPDEAT(0.004)AADQES(0.088)EDDLS(0.477)AS(0.477)RT(0.477)S(0.477)LER 42.611999999999995 0.018413 1463800.0 229.38 0.0 0.0 0.0 169.12 0.0 0.0 0.0 128.05 138.12 148.3 True False 268.09373619742723 0.0 0.0 0.0 144.24267203190936 0.0 0.0 0.0 99.04687945383164 106.91859607149392 111.47301712821849 2.4050101370187233 0.0 0.0 0.0 1.2939693905117735 0.0 0.0 0.0 0.8885278429299706 0.9591432871016133 1.0 6.800550727128013 -8.903129395239299 9.010257983135377 0.9509776546476685 0.41327766682571154 0.07997670942312685 0.7242578877977259 0.4644379872914492 39.19746550100219 0.11914231269320186 0.12662703728432828 1.2498865790924054e-09 8.903129395239299 -0.5376999878219569 SPDEATAADQESEDDLS(ph)ASRTSLER ddPTM_A549_MK2206_60min_R1 1 SPDEATAADQESEDDLSASRTSLER 25 1 C9JME2;Q9Y4F1;Q9Y4F1-2;M0QXT1 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 SPDEATAADQES(0.002)EDDLS(0.249)AS(0.249)RT(0.249)S(0.249)LER 50.757 0.002259 4171000.0 483.33 409.24 396.83 365.68 632.98 363.95 0.0 464.3 531.31 528.7 566.37 True False 564.9042877160279 430.06856799463156 453.1064610879898 455.27161641599895 539.8694805035359 402.46294742954234 0.0 530.1159468591154 410.9691333277256 409.2663028019033 425.7246979832035 1.3269239261714516 1.0102034719432684 1.0643180046506642 1.0694038155943708 1.2681187703252206 0.9453596404816078 0.0 1.2452083456056162 0.9653401253782555 0.9613402857309689 1.0 8.733776978800384 -2.000048974443829 0.5862006543733554 0.9467357551939026 20.991360689742045 0.11548224768643967 0.31726079529265266 269.2051266510006 1.9937937106445627 0.052965820242888796 6907.337029083998 0.009998872385337542 2.000048974443829 20.044624934548143 SPDEATAADQESEDDLS(ph)ASRTSLER ddPTM_A549_PD325901_60min_R1 2 SPDEATAADQESEDDLSASRTSLER 25 1 C9JME2;Q9Y4F1;Q9Y4F1-2;M0QXT1 C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 SPDEATAADQES(0.019)EDDLS(0.245)AS(0.245)RT(0.245)S(0.245)LER;SPDEATAADQESEDDLS(0.264)AS(0.264)RT(0.264)S(0.207)LER 94.721 3.8018e-09 7642000.0 542.52 1218.71 918.78 730.3000000000001 1058.27 770.23 952.4300000000001 1308.25 1416.06 858.41 913.92 True False 597.5962310178851 1321.4149687631175 981.1339358729674 775.4089723683619 983.940766033304 763.957502248943 988.6752448396937 1282.15592744773 1356.5479226812975 804.2098461028326 801.5136338162112 0.7455846111719607 1.648649396606672 1.22410136830928 0.9674307955018079 1.227603280244293 0.9531434900383992 1.2335102026054858 1.5996682693256983 1.6924826546273783 1.0033639007159292 1.0 9.64658325073065 -8.00688712824004 24.473572483377133 1.3594493140172959 1.1480823856046232 0.08499698055540694 0.2891881115870035 498.72538268916 1772240.25680605 0.05128915341242057 0.06941074662413385 9.842668803661448e-09 8.00688712824004 -0.21136692841267268 SPDKPGGS(ph)PSASR ddPTM_A549_MK2206_60min_R1 4 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 S(0.004)PDKPGGS(0.817)PS(0.179)ASR;SPDKPGGS(0.498)PS(0.498)AS(0.005)R;S(0.029)PDKPGGS(0.917)PS(0.054)ASR;SPDKPGGS(0.956)PS(0.022)AS(0.022)R 94.905 4.7718999999999995e-05 672735000.0 24680.3 24092.100000000002 21398.710000000003 20963.75 24068.18 17924.239999999998 17847.34 19457.76 25444.16 32811.09 31871.23 True False 28845.73126459744 25318.284984320842 24433.36884799077 26099.86969109849 20527.782604925258 19820.97117965243 21089.97065828912 22215.95706689085 19681.098385974252 25399.041980708334 23956.72398980036 1.2040766206964937 1.0568341896454694 1.0198960783783853 1.0894590471639853 0.8568693538258827 0.8273656777150024 0.8803361706412042 0.927337021386954 0.8215271167440729 1.0602051428869008 1.0 14.548143016941308 -6.7536373940923475 24.988546128188663 0.9018894535924921 1.084823478570841 0.5475350292117596 0.07924768401326335 104.66865747740385 335234.65611967037 0.011440469783083135 0.02347242891849442 1.7634477890755729e-07 6.7536373940923475 0.18293402497834899 SPDKPGGS(ph)PSASR ddPTM_A549_PD325901_60min_R1 5 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 SPDKPGGS(0.977)PS(0.023)ASR;SPDKPGGS(0.769)PS(0.216)AS(0.016)R;S(0.002)PDKPGGS(0.957)PS(0.041)ASR;S(0.001)PDKPGGS(0.949)PS(0.051)ASR;SPDKPGGS(0.982)PS(0.018)ASR 149.6 7.7714e-13 775804000.0 23575.899999999998 22552.4 22849.5 24376.7 25235.9 22805.2 22797.399999999998 22582.0 24662.1 24929.8 25889.699999999997 True False 25969.308012339727 24452.969895654696 24400.204475205584 25882.393395497522 23463.41744312874 22619.482012239954 23664.967532215946 22131.5842947637 23625.637701762953 23355.728173453725 22705.431028330215 1.143748734826354 1.0769656768525568 1.0746417649927347 1.1399208129193108 1.0333834849403547 0.9962146053962587 1.0422602197108035 0.9747264549679541 1.0405280424883618 1.0286405989964302 1.0 14.470749803959002 -6.886687999285591 5.992581275312388 1.016343522208992 1.1037251175100355 0.7236471774523361 0.02752185171029372 0.08887702743031196 4.369402388165699 0.003922923608872158 0.007489477531232166 1.2981115100253068e-07 6.886687999285591 0.0873815953010435 SPDKPGGS(ph)PSASRR ddPTM_A549_MK2206_60min_R1 2 SPDKPGGSPSASRR 14 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 SPDKPGGS(0.957)PS(0.043)ASRR;SPDKPGGS(0.92)PS(0.077)AS(0.003)RR 99.044 7.4824e-06 33479000.0 4094.9 5392.2 4927.700000000001 3770.7 7191.1 3462.9 3670.8 2633.8 8034.8 9610.5 9783.5 True False 4786.019009307024 5666.639948051634 5626.5219572695805 4694.521669273157 6133.298715992565 3829.34177951302 4337.736844395174 3007.1492156742156 6214.93062893906 7439.481375217873 7353.986939136381 0.6508060252101934 0.7705534419560852 0.7650981710786576 0.6383641564944716 0.8340100093668146 0.5207164237855881 0.5898483204138758 0.40891413604106314 0.8451103707928143 1.0116255898724145 1.0 12.844310898943315 -8.965675548743755 7.054184138924247 0.9326887765413158 0.6530277532656207 0.5795801340787778 0.11735866500855283 0.1091311302737718 15.17804673893309 0.0219221353600983 0.022862846399517214 1.0822421671875598e-09 8.965675548743755 -0.2796610232756951 SPDKPGGS(ph)PSASRR ddPTM_A549_PD325901_60min_R1 2 SPDKPGGSPSASRR 14 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 S(0.002)PDKPGGS(0.956)PS(0.034)AS(0.008)RR;SPDKPGGS(0.581)PS(0.359)AS(0.059)RR 61.815 0.0013083 43337000.0 6109.1 6241.7 5614.2 6225.700000000001 7483.2 9308.6 7726.3 8012.0 7322.4 7276.7 9741.6 True False 6729.291334718276 6767.709964248055 5995.213372927158 6610.247349409433 6957.605847638521 9232.79384785649 8020.328574493586 7852.194374707589 7014.664992331921 6817.247920150606 8543.444957090334 0.7876554912586562 0.7921523458322781 0.7017325450141327 0.7737215353536618 0.814379431550536 1.0806874620517166 0.9387698539378303 0.9190899472221605 0.8210581360988748 0.7979507042405498 1.0 13.060602207007761 -7.015887267008345 22.7878733370342 0.9269523068030457 0.7654856440726553 0.5115728215670214 0.07529446809932569 148.4285081052406 212899.51143893378 0.011915166795014068 0.02106981972051427 9.64079244239829e-08 7.015887267008345 -0.16146666273039045 SPDS(ph)PKTPK ddPTM_A549_PD325901_60min_R1 1 SPDSPKTPK 9 1 O00716 O00716 E2F3 Transcription factor E2F3 1 S(0.095)PDS(0.893)PKT(0.012)PK 62.408 0.0020059 14786000.0 4613.1 4852.3 5303.5 4551.6 6113.5 5417.0 4817.5 5454.3 5241.6 5204.7 5987.2 True False 5081.418516015267 5261.220350148332 5663.427402536282 4832.741994566388 5684.108850430047 5372.885748000629 5000.832598737151 5345.509707684425 5021.313780155004 4876.074353760338 5250.812355987854 0.9677394984836174 1.0019821683684067 1.0785811829816954 0.9203798701843321 1.0825198969352001 1.0232484773281922 0.9523921747145212 1.0180348001940274 0.9562927485742015 0.9286323759408053 1.0 12.358324924829697 -7.73930013280797 24.992451991861355 0.9805132956631218 1.013946204350391 0.13975132163751147 0.048482500026576295 403.44103175844396 455433.8047801425 0.00665302791644178 0.0098639172868287 1.8226356774926824e-08 7.73930013280797 0.033432908687269225 SPDVS(ph)PGPSR ddPTM_A549_MK2206_60min_R1 1 SPDVSPGPSR 10 0 E5RGB3;Q9UPQ4-2;Q9UPQ4 E5RGB3 TRIM35 Tripartite motif-containing protein 35 1 S(0.066)PDVS(0.923)PGPS(0.011)R 49.448 0.029149 4895100.0 1335.9 1625.0 1389.7 1461.1 1932.3 1437.5 1774.9 1704.0 2011.1 2069.8 2309.8 True False 1561.3672603807786 1707.7055590638165 1586.7803567622896 1819.069565591272 1648.0612297023322 1589.615295864726 2097.3763553222702 1945.5472182811375 1555.5890610667755 1602.230742461469 1736.2129127630428 0.8992948093537609 0.9835807270584924 0.9139318945837447 1.0477226336811247 0.9492276077359519 0.9155647237613165 1.2080179452095337 1.1205694900546246 0.8959667616981266 0.9228307949349644 1.0 10.761728161795004 -6.208836252908944 24.982300917241943 0.9829302666212071 0.9374003095791208 0.07257698815140834 0.09297236560357483 1049.4999596976343 498427.1250333929 0.013998859946773844 0.03703744965331214 6.182494619717216e-07 6.208836252908944 -0.04552995704208629 SPEDLER ddPTM_A549_MK2206_60min_R1 1 SPEDLER 7 0 Q8N196;P06744-2;P06744;A0A2U3TZU2 Q8N196;P06744-2 SIX5;GPI Homeobox protein SIX5;Glucose-6-phosphate isomerase 0 82.671 0.041152 8172500.0 2462.4 2588.4 2157.6 2423.8 2866.5 2470.5 2226.5 1992.6 3036.2 3747.0 2912.6 False True 2877.99292010003 2720.138504049711 2463.58012358805 3017.6311088085154 2444.841647229588 2731.926670214823 2631.0262297171876 2275.057152081571 2348.5055478151003 2900.55009759548 2189.3210363293947 1.3145595699958463 1.2424575742488102 1.1252712976797943 1.3783410741203408 1.1167122622311243 1.2478419678436736 1.2017544188623674 1.03916105236714 1.0727095336153136 1.3248628453589104 1.0 11.096267807733069 -8.247517366729651 0.7759816194723528 1.0213794159321052 1.2490248174417289 0.03856912902572318 0.11733520927384727 0.26253257361318666 0.3177976619958254 0.01550533181627002 0.02119708523731969 5.655651406072684e-09 8.247517366729651 0.22764540150962365 SPEDLER ddPTM_A549_PD325901_60min_R1 1 SPEDLER 7 0 Q8N196;P06744-2;P06744;A0A2U3TZU2 Q8N196;P06744-2 SIX5;GPI Homeobox protein SIX5;Glucose-6-phosphate isomerase 0 75.854 0.049703 8987400.0 4054.1 4063.8 3614.5 4507.0 4991.2 3804.2 4233.8 4481.5 4631.0 5231.9 5472.6 False True 4465.669247529322 4406.270687907341 3859.801705754197 4785.387153860335 4640.635330705236 3773.219856478492 4394.919575824256 4392.1129668312615 4436.375174736306 4901.556941118361 4799.504893669682 0.9304437325231872 0.9180677560552135 0.8042083071620765 0.9970585007991204 0.9668987600837771 0.7861685611478778 0.915702697088807 0.915117926564519 0.9243401711263328 1.0212630364401296 1.0 12.228669872935807 -10.112024735711469 0.6093366945489528 1.001453706146401 0.9021686561791626 0.31205920394048303 0.059161195726869495 0.8342431120403594 0.5886564787644892 0.04020053385253756 0.01331951602050538 7.726365774913652e-11 10.112024735711469 -0.09928504996723841 SPEEEGQMS(ph)S ddPTM_A549_MK2206_60min_R1 2 SPEEEGQMSS 10 0 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 SPEEEGQMS(0.5)S(0.5);SPEEEGQMS(0.5)S(0.5) 80.755 0.00041402 4798500.0 275.55 168.15 98.965 110.54 274.56 142.39 0.0 231.97000000000003 364.91999999999996 133.81 322.62 True False 322.0561034493027 176.70811677328038 112.99972512555225 137.62230496232922 234.17258770743283 157.45761528916765 0.0 264.8524578783308 282.2662026574949 103.58222806491895 242.50455014097017 1.328041487312665 0.7286795924882988 0.4659695047365686 0.5675040112951616 0.9656420367011922 0.6492975706956263 0.0 1.092154591426716 1.1639625008826058 0.42713519397762073 1.0 7.9218680067826455 SPEEEGQMS(ph)S ddPTM_A549_PD325901_60min_R1 2 SPEEEGQMSS 10 0 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 SPEEEGQMS(0.5)S(0.5);SPEEEGQMS(0.5)S(0.5) 101.66 0.00014872 6835300.0 618.46 710.59 438.94 757.13 556.39 555.6600000000001 661.29 495.53999999999996 567.94 728.5699999999999 747.55 True False 681.2456039138116 770.473913115822 468.72910796064366 803.8962005330108 517.3110858412977 551.1348891884857 686.4557528217732 485.6560659563905 544.0714568645516 682.5679658614657 655.6060891098878 1.0391081096253 1.1752085984464995 0.714955391273187 1.226187819006464 0.7890577809361833 0.8406494362136844 1.0470551817994398 0.7407741844127205 0.8298755394466119 1.0411251164371946 1.0 9.356685443674944 -5.734373666962058 24.9997333617611 0.9109586775707218 1.107158433856685 0.19802059653252047 0.1494787607783594 241.26747991097986 222847.479529008 0.018498692661335137 0.07160776458583139 1.8434286506817027e-06 5.734373666962058 0.1961997562859633 SPEEGAETPVYLALLPPDAEGPHGQFVSEK ddPTM_A549_PD325901_60min_R1 1 SPEEGAETPVYLALLPPDAEGPHGQFVSEK 30 0 P16152 P16152 CBR1 Carbonyl reductase [NADPH] 1 0 118.43 1.2886000000000002e-20 2180500.0 716.36 800.91 871.0 1036.7 888.77 1022.3 768.74 912.41 1002.1 1043.4 954.38 False True 789.084339843641 868.4054964938895 930.1112977484869 1100.7346044834728 826.3458612900484 1013.9747277424848 797.994821370669 894.2112667782013 959.985221896621 977.5195459322422 836.9973103132827 0.9427561237303043 1.0375248352576556 1.1112476543088916 1.3150993329613867 0.9872742135584074 1.2114432331484561 0.9534018945317574 1.0683562011011765 1.1469394346527886 1.1678885151570713 1.0 9.709079176464414 -11.041613416561962 1.3345543130945665 0.999908761582539 1.095199099141032 0.0 0.1169769666359878 0.8587683355864357 2.722187635527231 0.0735171239038032 0.016379310134372996 9.086289784534506e-12 11.041613416561962 0.09529033755849303 SPEEPSTPGTVVS(ph)SPSISTPPIVPDIQK ddPTM_A549_PD325901_60min_R1 1 SPEEPSTPGTVVSSPSISTPPIVPDIQK 28 0 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(0.001)PEEPS(0.002)T(0.002)PGT(0.013)VVS(0.249)S(0.249)PS(0.249)IS(0.118)T(0.118)PPIVPDIQK 42.708 0.0063615 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPEGLES(ph)PVAGPSNR ddPTM_A549_MK2206_60min_R1 2 SPEGLESPVAGPSNR 15 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 SPEGLES(1)PVAGPSNR;SPEGLES(1)PVAGPSNR 151.07 4.444e-14 8812600.0 4652.200000000001 5886.3 4348.0 4866.2 7165.8 5038.200000000001 4828.0 5180.9 8581.1 7395.0 7674.0 True False 5437.377624630185 6185.8875275799055 4964.611780386005 6058.41921845202 6111.72031247786 5571.338979913511 5705.185105355752 5915.308440840817 6637.494551200892 5724.464363949445 5768.334008374571 0.9426253085788899 1.0723871950894528 0.8606664893500087 1.0502892533019583 1.0595295458974385 0.9658488866672668 0.9890524884781051 1.0254795287951193 1.1506779152463187 0.9923947461500262 1.0 12.493938989163539 -8.529973187474102 24.83688074530512 1.0720442662836769 0.9944446695830604 0.08779633831498612 0.0691349215454141 201.99668806406493 707166.3920945831 0.012435967648142662 0.014116073001584576 2.9513914344074864e-09 8.529973187474102 -0.07759959670061645 SPEGLES(ph)PVAGPSNRR ddPTM_A549_MK2206_60min_R1 2 SPEGLESPVAGPSNRR 16 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.001)PEGLES(0.999)PVAGPSNRR;S(0.003)PEGLES(0.997)PVAGPSNRR 67.645 0.00091459 5369800.0 1355.88 1772.67 1656.74 1456.18 1560.9 1162.26 1430.13 1388.94 2413.8 2140.82 2030.6399999999999 True False 1584.7193959166784 1862.89133131425 1891.6906442126758 1812.9441653704043 1331.2936777117275 1285.2495817542522 1689.966109097436 1585.8264984503544 1867.0781540465352 1657.2072751359367 1526.376045187092 1.0382234449456622 1.2204668287269345 1.2393345992145772 1.1877441152767745 0.8721924599835733 0.8420268293693746 1.1071754659843946 1.0389487593510913 1.2232098111954335 1.0857136289326452 1.0 10.57589471976531 SPEGLES(ph)PVAGPSNRR ddPTM_A549_PD325901_60min_R1 1 SPEGLESPVAGPSNRR 16 1 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.004)PEGLES(0.991)PVAGPS(0.006)NRR 43.534 0.026997000000000004 3827900.0 1325.2 1437.2 1329.8 1656.9 1499.7 1658.6 1487.3 1300.2 1377.7 1606.4 1800.4 True False 1459.7333284393223 1558.3178878538379 1420.048224737012 1759.2429499070763 1394.3662456841319 1645.092911507078 1543.9000153817879 1274.2664910128326 1319.8000600808048 1504.9716298500616 1578.9622136759303 0.9244890826367307 0.986925383240153 0.8993554199318324 1.114176726124079 0.8830903194560643 1.0418823815151288 0.977794149859663 0.8070278566364514 0.8358655125813438 0.9531397374902255 1.0 10.624760930974464 SPEKIEEVLSPEGS(ph)PSKSPSK ddPTM_A549_PD325901_60min_R1 2 SPEKIEEVLSPEGSPSKSPSK 21 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SPEKIEEVLS(0.171)PEGS(0.615)PS(0.171)KS(0.038)PS(0.004)K;SPEKIEEVLS(0.001)PEGS(0.481)PS(0.016)KS(0.481)PS(0.021)K 100.93 2.6579e-10 66352000.0 4279.8 4476.4 4722.200000000001 4153.8 5542.6 5542.1 4900.5 5440.9 6399.6 4763.7 4531.3 True False 4714.282145377762 4853.641937927166 5042.676888895411 4410.3707920357365 5153.306896931969 5496.966975077399 5086.991209156494 5332.376981196519 6130.647067208475 4462.9191690218695 3973.9788262773513 1.1862876858339717 1.2213557620974653 1.2689239448261402 1.1098123530182917 1.2967625450987519 1.3832401266784595 1.2800750662080813 1.3418231989403062 1.542697466496417 1.123035467504626 1.0 11.95636847045902 -6.8528791319275495 23.49449490486085 1.2822967440558968 1.2034313055912875 0.08228353749278383 0.13500204876945127 37.62509278852841 9646.166741042121 0.028585584903743754 0.0540217217618509 1.4032041746050508e-07 6.8528791319275495 -0.07886543846460925 SPEKIEEVLSPEGSPS(ph)KSPSK ddPTM_A549_MK2206_60min_R1 1 SPEKIEEVLSPEGSPSKSPSK 21 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SPEKIEEVLS(0.011)PEGS(0.062)PS(0.433)KS(0.433)PS(0.062)K 48.097 0.017473 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPEKIEEVLSPEGSPS(ph)KSPSK ddPTM_A549_PD325901_60min_R1 1 SPEKIEEVLSPEGSPSKSPSK 21 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SPEKIEEVLS(0.005)PEGS(0.288)PS(0.399)KS(0.288)PS(0.019)K 93.876 3.5700000000000003e-07 42434000.0 1733.4 2006.5 1814.2 2017.1 2166.0 2070.4 1675.3 2331.7 2318.5 1916.5 2063.0 True False 1909.373491938364 2175.5947968123614 1937.322521670844 2141.6916858335244 2013.8676322943443 2053.5393488389336 1739.0544582593357 2285.1924143167357 2221.0615078009323 1795.4918629280635 1809.264078434483 1.0553315653016797 1.20247498568305 1.0707792990325475 1.1837363662725697 1.1130866169834646 1.1350136076408572 0.9611943767568203 1.2630507848771657 1.227604933008325 0.9923879461983591 1.0 10.821187282362759 -11.048955870029886 1.3848442105889947 1.0008377403275126 1.1453365110968283 0.28785377365023923 0.08224386376334412 0.43453010396999237 1.5000599306888314 0.05732922745802615 0.013113068965949994 8.933962598054802e-12 11.048955870029886 0.14449877076931572 SPEKIEEVLSPEGSPS(ph)KSPSKK ddPTM_A549_PD325901_60min_R1 1 SPEKIEEVLSPEGSPSKSPSKK 22 3 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SPEKIEEVLS(0.005)PEGS(0.083)PS(0.439)KS(0.439)PS(0.034)KK 51.538999999999994 0.0017075 6867800.0 2284.3 2099.6 1701.4 2394.5 2973.3 2093.8 2284.8 2593.8 2891.1 3071.0 2441.2 True False 2516.200454387221 2276.5406605468406 1816.8672353493396 2542.4028266959335 2764.465665328153 2076.7487869971783 2371.749314290533 2542.0646242032626 2769.5971210710713 2877.0965358998615 2140.9478760418137 1.1752740375161186 1.0633330619686598 0.848627496110912 1.1875127158146093 1.2912344556650766 0.970013707590431 1.1078033897188686 1.187354747236086 1.2936312705526978 1.3438424018145831 1.0 11.064033956662303 SPEKIEEVLSPEGSPSKS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 SPEKIEEVLSPEGSPSKSPSK 21 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SPEKIEEVLSPEGS(0.033)PS(0.033)KS(0.879)PS(0.055)K;SPEKIEEVLS(0.001)PEGS(0.081)PS(0.046)KS(0.862)PS(0.01)K 85.185 8.52e-06 50387000.0 5547.2 6035.299999999999 5960.700000000001 5571.299999999999 8000.7 5225.4 5590.7 5289.299999999999 9070.4 8780.7 9162.2 True False 6483.431743981032 6342.470991149445 6806.016890374165 6936.268750105162 6823.807628463203 5778.348359660204 6606.457822807036 6039.07447280189 7015.9688824524355 6797.133771539005 6886.972876144054 0.9414051515200739 0.9209374140443152 0.9882450552331469 1.0071578434890989 0.9908283002101475 0.8390258628251549 0.9592687442826004 0.876883731271947 1.0187304362349405 0.9869552114955694 1.0 12.74965427975054 -8.804052111753387 24.999670373079965 1.00884496021874 0.9425572254634027 0.2434409384209092 0.047697549001404375 129.7757022794353 76135.094894403 0.008255704279212284 0.008788899605995559 1.5701743850625958e-09 8.804052111753387 -0.06628773475533722 SPEKIEEVLSPEGSPSKS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 SPEKIEEVLSPEGSPSKSPSK 21 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SPEKIEEVLSPEGS(0.004)PS(0.132)KS(0.837)PS(0.028)K;SPEKIEEVLSPEGS(0.026)PS(0.192)KS(0.764)PS(0.018)K 144.7 2.5863e-22 24462500.0 4410.1 4368.1 3758.3 5550.6 5440.7 6474.700000000001 4507.8 5386.3 5190.0 5552.200000000001 5104.1 True False 4857.810105455969 4736.215116848284 4013.3608384938434 5893.447955672771 5058.56400139605 6421.9721898799435 4679.346795762812 5278.866021029395 4971.8823487111695 5201.633144455623 4476.328057555718 1.0852220934201497 1.0580580904596337 0.8965743321067767 1.3165808850236205 1.1300699895883546 1.4346518189255852 1.0453538560169675 1.179284885547888 1.110705534711423 1.1620312625826523 1.0 12.128100055932917 -10.003609636117998 0.8249951017065688 1.0094971313553833 1.14286181519768 0.0 0.14174288248165853 0.8687473042620949 1.1957886636044521 0.05822984916620561 0.02703763526394006 9.917229506566574e-11 10.003609636117998 0.1333646838422966 SPESSESQT(ph)SQSESR ddPTM_A549_PD325901_60min_R1 1 SPESSESQTSQSESR 15 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 SPESSES(0.029)QT(0.363)S(0.274)QS(0.209)ES(0.125)R 70.332 0.0020248 4139800.0 377.15 354.63 226.51 350.35 401.18 326.99 393.4 233.17 333.05 386.55 585.69 True False 415.43799035684435 384.51591467409344 241.88233071528092 371.99032379741936 373.0025007958656 324.327101853189 408.37105227674033 228.51924143167366 319.05306671257307 362.1431670309642 513.65384299481 0.8087898027486226 0.7485895801581273 0.4709053266398416 0.7242043038723609 0.7261748468990515 0.6314118083147798 0.795031630437673 0.4448895779681388 0.6211441247131811 0.7050335006149722 1.0 9.004652628508623 -10.67404563425626 0.9413629910196407 0.999931885184917 0.660702366775834 0.0951205087783995 0.14137303090915432 0.33502812357794715 0.5289058594976205 0.07599751888689088 0.020188756516054743 2.1181385564218635e-11 10.67404563425626 -0.339229518409083 SPESSESQTSQS(ph)ESR ddPTM_A549_MK2206_60min_R1 2 SPESSESQTSQSESR 15 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 SPESSESQT(0.003)S(0.09)QS(0.553)ES(0.354)R;SPESSESQT(0.001)S(0.008)QS(0.495)ES(0.495)R 90.444 3.2027e-05 7986700.0 493.99 343.08000000000004 601.75 514.95 580.47 573.8399999999999 508.0 305.2 956.99 583.49 719.1700000000001 True False 577.3634351040504 360.5413065868395 687.0871984469362 641.1127731169838 495.0836319439593 634.5633679158362 600.2970243414912 348.46303463580034 740.2332929990025 451.67920374859517 540.5802409177402 1.068043911712096 0.6669524323988432 1.2710179663253542 1.1859715257601167 0.9158374547753696 1.1738560159700646 1.1104679359392977 0.6446092702985528 1.3693310205758027 0.8355451597375846 1.0 9.078364969773565 SPESSESQTSQSES(ph)R ddPTM_A549_PD325901_60min_R1 1 SPESSESQTSQSESR 15 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 SPESSESQTSQS(0.131)ES(0.868)R 115.82 9.8914e-07 5046000.0 398.43 353.27 528.84 419.87 281.65 279.66 394.69 276.46 306.6 464.44 648.83 True False 438.8783202913365 383.04130270117304 564.7302625732603 445.8044163060438 261.86787563975184 277.38254168097745 409.71014393265506 270.94578842132546 293.7146682302206 435.11517913817386 569.0280232722473 0.7712771644663946 0.6731501561178995 0.9924471897284209 0.7834489657335416 0.46020207253389184 0.4874672781243074 0.7200175161437211 0.47615543934589916 0.5161690746638236 0.7646638853320519 1.0 9.152355893344135 -10.902742736446477 1.1766605384754716 0.9983763869201302 0.6431775094395237 0.1704763848984947 0.1690968662580775 0.4074331419762679 1.0092850310539663 0.11575013066977445 0.028122923356864876 1.2509998670924672e-11 10.902742736446477 -0.3551988774806065 SPFDCSNFDKEFLNEKPRLS(ph)FADR ddPTM_A549_PD325901_60min_R1 3 SPFDCSNFDKEFLNEKPRLSFADR 24 3 A0A087X0I9;Q04759-3;Q04759-2;Q04759 A0A087X0I9 PRKCQ Protein kinase C;Protein kinase C theta type 1 SPFDCSNFDKEFLNEKPRLS(1)FADR;SPFDCS(0.015)NFDKEFLNEKPRLS(0.985)FADR;SPFDCSNFDKEFLNEKPRLS(1)FADR 101.49 2.1896999999999997e-11 12188900.0 4125.4 4840.5 5344.2 4968.7 4666.900000000001 4452.200000000001 4938.0 5637.6 4210.77 4535.5 5112.5 True False 4544.207571041032 5248.425922736228 5706.88954928526 5275.605314263558 4339.113043930969 4415.942759322205 5125.918292177283 5525.15364538836 4033.805980247117 4249.127755966726 4483.694910807703 1.0134961591805602 1.170558217528401 1.272809515992962 1.1766200464592267 0.9677538570859878 0.9848892146247094 1.1432352990435488 1.232276895573398 0.8996611188963475 0.9476844077246278 1.0 12.130472399192747 -8.774302423507553 24.99950440036449 0.9526177445692035 1.120026132374124 0.3893452743705754 0.09539838567367957 183.3957929527711 356430.96075011307 0.01802711259204787 0.019251727078350416 1.6815027290064353e-09 8.774302423507553 0.16740838780492062 SPFIEEQLHT(ph)VLEKSPENSPPVKPK ddPTM_A549_MK2206_60min_R1 1 SPFIEEQLHTVLEKSPENSPPVKPK 25 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 SPFIEEQLHT(0.496)VLEKS(0.496)PENS(0.008)PPVKPK 54.324 0.0031565 1614800.0 665.66 928.4 828.91 842.31 1225.9 735.14 937.43 1053.2 1259.9 1121.7 1334.1 True False 778.0071341755139 975.6515944829828 946.461902226257 1048.6759878127323 1045.5717339399107 812.9320268535615 1107.7488967095358 1202.4943252897272 974.5346616468753 868.3071909455164 1002.8061507131235 0.7758300381606666 0.9729214303174842 0.9438134195259986 1.0457414796139706 1.04264591236938 0.8106572005720775 1.1046490848922141 1.1991293875038558 0.9718076229925957 0.8658774084383495 1.0 9.969827034746046 -4.573925958103743 1.250923814537199 1.0036062793734752 1.3424201803420243e-10 0.2850009586435739 0.10095998851234451 6.031186821305402 2.2906536118992613 0.013150327304116326 11.901920476615127 2.6673133700587385e-05 4.573925958103743 -1.0036062792392333 SPFSVAVSPS(ph)LDLSK ddPTM_A549_PD325901_60min_R1 1 SPFSVAVSPSLDLSK 15 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 SPFS(0.001)VAVS(0.314)PS(0.676)LDLS(0.008)K 47.64 0.028512 25773000.0 9578.8 10376.0 10050.0 10348.0 10537.0 10793.0 11026.0 11078.0 11453.0 11769.0 11847.0 True False 10551.23272446014 11250.421934575166 10732.053435559465 10987.172457986857 9796.917470676606 10705.105386407744 11445.60046365871 10857.040599477119 10971.670238880346 11025.903331489899 10389.89410432057 1.0155284181455206 1.0828235419547492 1.0329319363415466 1.0574864717262047 0.9429275575198232 1.030338257437686 1.101608962395404 1.044961622367478 1.0559944238813606 1.0612142165053298 1.0 13.34289332965778 -10.886320786489026 1.156123310120434 1.0001811444535191 1.0419099347501355 0.0 0.042523514353920544 0.8060207961188394 1.9262007048709413 0.026526116895381705 0.0064849867376688825 1.299209577722605e-11 10.886320786489026 0.04172879029661636 SPFSVAVSPSLDLSK ddPTM_A549_PD325901_60min_R1 1 SPFSVAVSPSLDLSK 15 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 133.32 5.312e-09 2309700.0 3723.7 4488.7 4433.0 4128.7 5586.3 3908.2 4287.3 5070.8 4967.3 4335.9 4715.0 False True 4101.727282756947 4866.978502094023 4733.850037794536 4383.720422041974 5193.937559688779 3876.372914959579 4450.455547600582 4969.6589160343565 4758.541655251059 4062.1305340306776 4135.084890847597 0.9919330294368364 1.1769960304482174 1.1448011740393087 1.060128277352829 1.2560655214563543 0.9374349057595796 1.0762670332236737 1.2018275433798145 1.1507724220567737 0.9823572287528138 1.0 12.013701232038734 -10.861070111312943 1.1292523417781917 1.0005097784900394 1.1154649935116294 0.20944593903515352 0.08809995279491628 0.6379054318934703 1.4546557021015099 0.0566763915700116 0.014032497820518164 1.3769871539107335e-11 10.861070111312943 0.11495521502159001 SPGAFDMS(ph)GVRGSLAEAVGSPPPAATPTPTPPTR ddPTM_A549_MK2206_60min_R1 1 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 S(0.115)PGAFDMS(0.442)GVRGS(0.442)LAEAVGSPPPAATPTPTPPTR 51.494 0.001397 3581700.0 306.37 485.3 615.5 470.66 554.69 426.79 462.72 515.51 862.02 748.27 486.02 True False 358.07776597264706 509.9996971161047 702.787155204137 585.9717211287302 473.09583579340017 471.95263451972664 546.7902344553052 588.5851211831628 666.7738463630764 579.2352873039149 365.3278205303893 0.980154660690181 1.3960056378287267 1.9237164971006542 1.6039613963097752 1.2949898945734584 1.2918606467871447 1.4967111830176676 1.6111149715579958 1.8251384342836043 1.5855219743817237 1.0 8.513047812111243 -11.037160914502952 1.3537738902897192 1.0019573956281338 1.5345325509881382 0.0 0.30209453643285017 0.39316274109095856 1.2919673710056885 0.18850409712428814 0.042938779539503744 9.179923995286074e-12 11.037160914502952 0.5325751553600044 SPGAFDMS(ph)GVRGSLAEAVGSPPPAATPTPTPPTR ddPTM_A549_PD325901_60min_R1 1 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 S(0.061)PGAFDMS(0.469)GVRGS(0.469)LAEAVGS(0.001)PPPAATPTPTPPTR 60.659 0.00027793 8693200.0 660.72 665.99 671.27 585.13 1013.7 840.36 700.61 1124.8 1050.4 747.58 902.23 True False 727.795808003644 722.1153145921086 716.8264188744284 621.2721511733523 942.5012090751518 833.51638678047 727.272096938503 1102.3649816114698 1006.2553408643954 700.3776712171993 791.2614297071955 0.9197918420880987 0.9126128071973959 0.9059286753553607 0.7851667323191182 1.1911375604696444 1.0534020179511479 0.9191299735254735 1.3931741649778095 1.2717103388152737 0.8851406689649621 1.0 9.628010624079108 -6.76735065818567 24.999711016228304 1.133211995975396 0.8849315390756249 0.33432067454956327 0.14584503835561147 110.53523572346103 467472.9664100718 0.021093286868769243 0.040618425687496885 1.7086351712457256e-07 6.76735065818567 -0.24828045689977096 SPGAFDMSGVRGS(ph)LAEAVGSPPPAATPTPTPPTR ddPTM_A549_MK2206_60min_R1 2 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 SPGAFDMS(0.21)GVRGS(0.79)LAEAVGSPPPAATPTPTPPTR;SPGAFDMS(0.007)GVRGS(0.993)LAEAVGSPPPAATPTPTPPTR 133.77 4.5849e-30 13651200.0 1904.65 1838.3 2164.86 1682.27 2493.8 1828.67 1794.01 2017.7199999999998 3075.3 3102.2 3098.4 True False 2226.108355778314 1931.8616179858545 2471.869700755852 2094.4262255199706 2126.9653235168844 2022.1786456270952 2119.958394958424 2303.7379890083444 2378.7494602449688 2401.4108654285296 2328.9817685102653 0.9558290175891955 0.829487651688047 1.0613521042446739 0.8992883730728694 0.9132597568066835 0.8682672715469916 0.9102511765536304 0.9891610231375627 1.0213688627397617 1.031099039888403 1.0 11.18548363070173 -8.362354838303105 4.071204054305219 1.009842001874842 0.9186786683556676 0.3887499089429244 0.055164621708467844 0.17779190271683382 5.237028606356415 0.008572427953218479 0.010444124983401559 4.341553545892605e-09 8.362354838303105 -0.09116333351917438 SPGAFDMSGVRGS(ph)LAEAVGSPPPAATPTPTPPTR ddPTM_A549_PD325901_60min_R1 2 SPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 S(0.005)PGAFDMS(0.055)GVRGS(0.939)LAEAVGS(0.001)PPPAATPTPTPPTR;SPGAFDMS(0.03)GVRGS(0.97)LAEAVGSPPPAATPTPTPPTR 98.561 3.0570999999999997e-10 9462300.0 2931.0 3293.8999999999996 4073.2 3597.6 4759.7 4709.7 3585.5 3949.7 4819.799999999999 4625.200000000001 4133.4 True False 3228.5529623118396 3571.488512943057 4349.631846141375 3819.81558125759 4425.395092073589 4671.345764696057 3721.948164560884 3870.920135020289 4617.24056730599 4333.164082658429 3625.018003781432 0.8906308765760554 0.9852333172462768 1.1998924809763876 1.0537369958640082 1.2207925829491728 1.2886407073904598 1.0267392218958193 1.067834733781279 1.2737152098250333 1.1953496722328814 1.0 11.823772445003918 -5.586238989201139 4.385933293434569 1.1357625721849949 0.9086650668703105 0.42674552647300423 0.09522952076359965 0.16860836522669 6.300210287851717 0.015779222373163204 0.07106171359185172 2.592752196163631e-06 5.586238989201139 -0.22709750531468442 SPGAGSLGS(ph)PASQR ddPTM_A549_MK2206_60min_R1 2 SPGAGSLGSPASQR 14 0 E9PC47;P53667-4;P53667-2;P53667 E9PC47 LIMK1 LIM domain kinase 1 1 SPGAGSLGS(1)PASQR;SPGAGSLGS(1)PASQR 227.47 4.2134999999999995e-47 34817000.0 6355.0 6472.299999999999 4956.5 5232.1 7342.9 6239.1 5922.1 5545.5 8410.1 8827.3 8821.9 True False 7427.5686351671875 6801.712424571532 5659.406230331933 6513.964734877898 6262.769137080814 6899.3174208206065 6998.068913095956 6331.59160738149 6505.225778170009 6833.206799173897 6631.178757946266 1.1200977844650308 1.0257169460890965 0.8534540293534028 0.9823238028490925 0.9444428156270136 1.0404360480484747 1.0553280447627866 0.9548214334886124 0.9810059441354487 1.0304663844245696 1.0 12.695049631181895 -5.349927435473628 4.149482751011959 0.9843831378115442 1.1214296426615031 0.3616106274333013 0.052764911680731524 0.16002761577955152 4.4756942586042685 0.006753454406663519 0.05067677278498392 4.467582329597125e-06 5.349927435473628 0.13704650484995895 SPGAGSLGS(ph)PASQR ddPTM_A549_PD325901_60min_R1 2 SPGAGSLGSPASQR 14 0 E9PC47;P53667-4;P53667-2;P53667 E9PC47 LIMK1 LIM domain kinase 1 1 SPGAGSLGS(0.999)PAS(0.001)QR;SPGAGSLGS(0.999)PAS(0.001)QR 174.24 9.701199999999999e-23 55767000.0 12584.3 11595.5 12249.9 12279.7 13081.7 12742.9 12134.8 12521.8 13158.4 12702.0 14073.6 True False 13861.848871927985 12572.693479410786 13081.25187863282 13038.189179777857 12162.886521415016 12639.126047295034 12596.596454417344 12272.042875837931 12605.398207568598 11899.993552263126 12342.636419900891 1.123086543291315 1.018639215454727 1.0598426003654298 1.0563536619093372 0.9854366690899157 1.0240215799370134 1.020575833709804 0.9942805133634871 1.0212889514629173 0.9641370893074301 1.0 13.59136297044388 -2.000000000000064 0.522282503296119 1.0096213867081587 4.615279953771144 0.6070879855620424 0.02586279039895052 46.734687090017225 0.41884762615715465 0.0037693477966350103 187.94750674249804 0.009999999999998527 2.000000000000064 3.605658567062985 SPGAPGPLTLK ddPTM_A549_MK2206_60min_R1 1 SPGAPGPLTLK 11 0 Q15942;Q15942-2;H0Y2Y8;C9JJK5 Q15942 ZYX Zyxin 0 58.978 0.028657 1821500.0 1609.8 1823.5 1353.8 1637.0 1965.4 1681.4 1520.7 1673.6 3064.5 2581.6 2638.3 False True 1881.4948841687078 1916.3083612017663 1545.7891969380355 2038.0650734877215 1676.2922635496375 1859.3246319770112 1796.9915057403666 1910.8379251850424 2370.3956430009143 1998.4147670009334 1983.1372966242677 0.9487466588276176 0.9663014076048799 0.7794665551241994 1.0276974150791036 0.8452729250783859 0.9375672754185942 0.9061357016477065 0.9635429319178785 1.195275610536822 1.0077036876885284 1.0 10.953568846395344 -8.584252987012844 7.0210009969825595 1.0920528567598524 0.9163181954657827 0.4114908035608693 0.07779565610696866 0.14120133029109866 13.193381864908185 0.01464259268128503 0.016622082510635617 2.6046358447767508e-09 8.584252987012844 -0.17573466129406967 SPGAPGPLTLK ddPTM_A549_PD325901_60min_R1 2 SPGAPGPLTLK 11 0 Q15942;Q15942-2;H0Y2Y8;C9JJK5 Q15942 ZYX Zyxin 0 ; 83.86200000000001 0.0015782 3482200.0 4667.3 4231.5 3502.1 4135.9 5667.0 4218.9 3953.6 4678.0 5317.0 5284.8 5695.3 False True 5141.120860115342 4588.10335545054 3739.773565838087 4391.365149689589 5268.969470088665 4184.542677171836 4104.056411492935 4584.693620179995 5093.544980365568 4951.116826090392 4994.814205481296 1.0292917110857676 0.9185733776474744 0.7487312664671429 0.8791848843687752 1.054887980479136 0.8377774437695259 0.8216634778905598 0.9178907225715752 1.0197666561402674 0.9912514504857958 1.0 12.286215299052955 -8.690960061877936 4.9737681119654455 1.0093596575496324 0.8949955762610294 0.2342729516615778 0.08264310404165358 0.19786763433986893 9.208439425067791 0.01412259250016409 0.0159103576477346 2.0372294145921474e-09 8.690960061877936 -0.11436408128860298 SPGDPAKPAS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SPGDPAKPASSPR 13 1 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3;H7C3V8 C9JWC4 HJURP Holliday junction recognition protein 1 S(0.053)PGDPAKPAS(0.571)S(0.376)PR 61.165 0.0021529 23292000.0 4607.0 4233.4 4385.0 4690.5 5632.1 5019.8 3823.6 3842.1 6406.3 6124.2 6460.0 True False 5384.548969664086 4448.861977686623 5006.858936750838 5839.672710564549 4803.625550797757 5550.991904126437 4518.298626519934 4386.729440937773 4955.283278758934 4740.7389665583805 4855.803713070073 1.1088893389926 0.916194772394092 1.0311081815918917 1.2026171269745223 0.9892544745719701 1.1431664523805127 0.9304944955576155 0.9033992517305175 1.0204867353721687 0.9763036660229943 1.0 12.245494389142033 -7.772005084602533 24.999462675795083 0.9948600472333747 1.0596757166187516 0.24363301954802952 0.07961411311816527 328.52260929613186 777314.4968585317 0.012246330559965251 0.01701622181530945 1.6904211405331164e-08 7.772005084602533 0.06481566938537686 SPGFAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SPGFASPK 8 0 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 S(0.007)PGFAS(0.993)PK;S(0.051)PGFAS(0.949)PK 61.161 0.010962999999999999 20109700.0 8104.7 9160.5 8147.8 8326.5 10296.3 9159.3 8795.3 9165.7 9495.0 8984.4 9430.2 True False 8927.4831776352 9932.48748377755 8700.758704701637 8840.808994146466 9573.123408306676 9084.709697556238 9130.009954472827 8982.882923147448 9095.958169751933 8417.123450712701 8270.34518296309 1.0794571423724628 1.2009761701649977 1.0520429936377018 1.0689770255730717 1.1575240448279362 1.0984680199649632 1.103945452395463 1.0861557437351208 1.0998281170282476 1.0177475382831631 1.0 13.013731829700284 -10.98009403456147 0.39644941545027146 0.9554805183979379 1.1133060328960471 0.47092473935979695 0.03954358013856426 1.6834540270879983 0.29028186572668346 0.11335153988167729 0.011452654312103353 1.0469018456206264e-11 10.98009403456147 0.15782551449810922 SPGGGGGGGSGNDNNQAAT(ph)KSPR ddPTM_A549_PD325901_60min_R1 1 SPGGGGGGGSGNDNNQAATKSPR 23 1 Q9NS37;E9PIM0;J3KN20 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 SPGGGGGGGSGNDNNQAAT(0.629)KS(0.371)PR 84.948 7.3778e-06 12468000.0 688.13 1016.3 762.99 964.46 912.93 759.48 819.13 993.75 814.2 866.63 1050.8 True False 757.9884510254684 1101.9471677051608 814.771089631594 1024.032503752417 848.8089462375239 753.295046684791 850.3024403951348 973.9288766682063 779.9820054567691 811.9108338999985 921.5582615700215 0.8225073580634111 1.1957433552034118 0.8841232547180484 1.1111967050328584 0.9210583656332725 0.8174144577700738 0.9226789839054874 1.0568283279333452 0.8463729728036352 0.8810195380558782 1.0 9.847931566722544 -6.882333971477489 17.418789236689385 0.9266217470673677 1.0096188611831345 0.10913378754989855 0.1122332142441434 2.1008405490879856 307.04801782913216 0.015495056858092592 0.029283425546132592 1.3111912081453577e-07 6.882333971477489 0.08299711411576682 SPGGGGGGGSGNDNNQAATKS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SPGGGGGGGSGNDNNQAATKSPR 23 1 Q9NS37;E9PIM0;J3KN20 Q9NS37 CREBZF CREB/ATF bZIP transcription factor 1 SPGGGGGGGSGNDNNQAAT(0.016)KS(0.984)PR 105.55 8.691899999999999e-11 13208000.0 2317.5 2150.1 1921.5 2082.1 2902.6 2420.3 2146.5 2434.0 2456.1 2504.6 3107.6 True False 2552.7708939466697 2331.2964727766052 2051.90454491816 2210.706588207813 2698.7313894263934 2400.5898792479084 2228.1862321098683 2385.45196056394 2352.8786583178216 2346.45912856229 2725.3849006994656 0.9366643563965975 0.8554008177627614 0.7528861499128222 0.8111538989008265 0.9902202763117123 0.8808259995246179 0.8175675412078521 0.8752715845573656 0.863319767315787 0.8609643092834612 1.0 11.41224427789732 -10.682231065143222 0.6026551116271289 1.0189038449547465 0.8600605666645237 0.0 0.07243445660753947 0.8913658249061873 0.47245688721882273 0.07686926627475729 0.013263306132051187 2.0785904847015425e-11 10.682231065143222 -0.15884327829022282 SPGKAEAES(ph)DALPDDT(ph)VIESEALPSDIAAEAR ddPTM_A549_PD325901_60min_R1 1 SPGKAEAESDALPDDTVIESEALPSDIAAEAR 32 1 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 S(0.495)PGKAEAES(0.505)DALPDDT(0.996)VIES(0.004)EALPSDIAAEAR 64.665 0.00052248 6534000.0 443.49 1009.3 1077.3 1194.9 1296.4 918.19 1305.8 995.37 930.49 1105.4 1348.4 True False 488.51277831991786 1094.3572531386574 1150.4120563311649 1268.7062591852048 1205.3453363372062 910.7125650649243 1355.492933561177 975.5165644973405 891.3847411661378 1035.6048553512564 1182.5553482118555 0.4130992930340208 0.925417364010435 0.9728187843982994 1.0728514831070006 1.0192718151922542 0.7701225709578962 1.1462405845196344 0.8249225425029122 0.7537784531726169 0.8757347864666096 1.0 10.207691993573123 -5.260718406023077 24.65874335143411 0.9151433702226944 0.4130991027314073 0.6094876397880393 0.11928410196012473 28.8266870116048 985686.2152651433 0.01806111874747917 0.14973855939470615 5.486325797433486e-06 5.260718406023077 -0.502044267491287 SPGKAEAES(ph)DALPDDTVIESEALPSDIAAEAR ddPTM_A549_PD325901_60min_R1 2 SPGKAEAESDALPDDTVIESEALPSDIAAEAR 32 1 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 S(0.016)PGKAEAES(0.983)DALPDDTVIESEALPSDIAAEAR;S(0.001)PGKAEAES(0.992)DALPDDT(0.007)VIESEALPSDIAAEAR 230.22 1.2428999999999997e-115 46093000.0 4755.5 4151.8 3816.3 4312.4 5122.4 4930.6 4436.8 4359.2 3764.9 5120.0 4569.0 True False 5238.274859185933 4501.6867567433665 4075.29706727618 4578.767153829005 4762.620295320664 4890.446828335221 4605.6448519101195 4272.252336273754 3606.6743457924263 4796.722326215331 4007.0419652773408 1.3072672820943052 1.1234438759943932 1.0170337876643911 1.142680110042744 1.1885626196557757 1.220463092404059 1.1493877258635967 1.0661860727425791 0.9000839963857968 1.1970731446740248 1.0 11.968321903684723 -8.511871465548756 3.3964566644172374 0.9530641948762234 1.1582953077227875 0.1480929661145839 0.10166145650822418 0.12076739806864123 2.9273036870609053 0.012977065370994233 0.01527234508439625 3.0770073557390183e-09 8.511871465548756 0.20523111284656415 SPGS(ph)PPGPELPIETALDDR ddPTM_A549_MK2206_60min_R1 2 SPGSPPGPELPIETALDDR 19 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.001)PGS(0.999)PPGPELPIETALDDR;S(0.028)PGS(0.972)PPGPELPIETALDDR 171.72 3.9796e-34 17581000.0 2198.17 2955.9 2001.13 2109.53 3497.8 2900.3 2019.88 2981.8999999999996 3564.8999999999996 3564.3 2882.8 True False 2569.167355903299 3106.342684330297 2284.920324766296 2626.364944700399 2983.2782535076403 3207.2078209366723 2386.8660502497855 3404.593456685753 2757.4558419755112 2759.122154486141 2166.921198767556 1.1856302653573751 1.433528217868301 1.0544547379322573 1.2120260516137613 1.3767359215482273 1.4800758895897015 1.1015010843990654 1.5711662512795241 1.2725224357691567 1.2732914127451436 1.0 11.081430974681414 -10.329490372223479 0.8864186719778545 1.0125079006407374 1.2992594694085045 0.041937186858375664 0.16984423503483703 0.45811881196596743 0.6909469580444451 0.07539744258047351 0.02775691845941919 4.682843325483932e-11 10.329490372223479 0.2867515687677671 SPGS(ph)PPGPELPIETALDDR ddPTM_A549_PD325901_60min_R1 1 SPGSPPGPELPIETALDDR 19 0 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.028)PGS(0.972)PPGPELPIETALDDR 110.37 6.3779e-10 13693000.0 1054.8 1237.0 1092.9 840.46 1589.4 1050.0 1191.6 1035.6 1308.3 1370.7 1194.2 True False 1161.8825194972803 1341.2463312518782 1167.0707661415863 892.3733053768497 1477.7660271323325 1041.4491481263906 1236.94699006854 1014.9441455875158 1253.3167007358043 1284.153768074875 1047.320970657519 1.1093853289004978 1.280644968284966 1.1143391556543427 0.8520533154383497 1.410996312051859 0.9943934832819761 1.181058171013201 0.9690860529130084 1.1966882511184314 1.2261320111528655 1.0 10.032487934964808 -11.030077304419079 1.279995239268651 0.9989735398735877 1.1298711874654148 0.0 0.15936820420225187 0.863243848536725 2.4867806555314442 0.09943881652025639 0.02161420898956012 9.330881963123936e-12 11.030077304419079 0.1308976475918271 SPGS(ph)PPGPELPIETALDDRER ddPTM_A549_MK2206_60min_R1 2 SPGSPPGPELPIETALDDRER 21 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.009)PGS(0.991)PPGPELPIETALDDRER;S(0.007)PGS(0.993)PPGPELPIETALDDRER 273.48 3.9717999999999995e-113 128501000.0 8344.7 10599.1 8520.900000000001 8527.7 13190.900000000001 9862.6 8471.3 8608.4 14217.599999999999 12607.6 14162.8 True False 9753.081351672647 11138.548917583572 9729.291747813048 10616.986882823 11250.536083879562 10906.253785735975 10010.42555571668 9828.667062119337 10997.33630084183 9759.534403641519 10645.785886605076 0.9161447971581259 1.0462871446248518 0.9139101473057809 0.9972947977642203 1.0568065339389745 1.0244667610174867 0.940318137368531 0.9232448563976975 1.0330224952841751 0.9167509573831772 1.0 13.377994835009705 -5.240770323031392 23.5207280037264 1.002459862725966 0.9161446060978709 0.041226000954281194 0.05363952052048223 2612.707228968298 2973074.522279497 0.006493277169234651 0.33737597104905936 5.744201644365596e-06 5.240770323031392 -0.08631525662809514 SPGS(ph)PPGPELPIETALDDRER ddPTM_A549_PD325901_60min_R1 2 SPGSPPGPELPIETALDDRER 21 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;B1AP52;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 S(0.125)PGS(0.875)PPGPELPIETALDDRER;S(0.005)PGS(0.995)PPGPELPIETALDDRER 288.5 7.101099999999998e-145 171503000.0 15415.4 16480.9 14717.900000000001 16118.3 19621.3 17648.2 16014.199999999999 17953.5 18344.6 18984.7 19344.1 True False 16980.360059782317 17869.803282723587 15716.745199922458 17113.890783684736 18243.167577810276 17504.478910442056 16623.629144306495 17595.40335825172 17573.640257064904 17786.002802050836 16964.89833235312 1.000911395230687 1.0533398392753557 0.9264273143299446 1.0087823957687667 1.0753478871735656 1.0318057065546877 0.9798838058819483 1.0371652699324572 1.0358824387147003 1.0484001998486379 1.0 14.050265163807035 -6.520277239446937 24.996929944688045 1.0213236465286692 0.9942154331082734 0.1390291222097787 0.03634714696354904 179.949741869302 1729061.320827236 0.005020226400612255 0.01060329630484838 3.0180244968244794e-07 6.520277239446937 -0.02710821342039582 SPGS(ph)PVGEGTGSPPK ddPTM_A549_MK2206_60min_R1 4 SPGSPVGEGTGSPPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.001)PGS(0.999)PVGEGTGSPPK;S(0.001)PGS(0.999)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;S(0.057)PGS(0.943)PVGEGTGSPPK 209.6 2.4116999999999995e-45 322664000.0 11967.8 12912.3 12606.8 11135.9 16186.6 12801.9 12636.0 12620.7 16866.899999999998 19058.9 16881.7 True False 13987.672055382212 13569.480917107509 14394.633807030896 13864.19599990954 13805.572582259361 14156.588560786546 14931.797636966703 14409.722874272755 13046.574080904578 14753.48125301909 12689.507978782514 1.102302160081407 1.0693464978938783 1.1343728875145858 1.0925715971880992 1.0879517634050873 1.1156136695336858 1.176704223830696 1.1355619854108232 1.0281386877031873 1.1626519544877265 1.0 13.63134851095606 -8.847703366663703 5.076698955507213 1.0122911249039492 1.1139019391562734 0.0 0.05304070160654863 0.08168377656624078 3.5534760159232976 0.005291271201962641 0.005616334555524281 1.4200271024072763e-09 8.847703366663703 0.10161081425232421 SPGS(ph)PVGEGTGSPPK ddPTM_A549_PD325901_60min_R1 2 SPGSPVGEGTGSPPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK 252.12 1.2623999999999997e-76 435560000.0 24087.0 23308.0 24793.0 23521.0 28449.0 24707.0 24674.0 26120.0 27941.0 26419.0 28142.0 True False 26532.2945080878 25272.24695943312 26475.602072420465 24973.83874993323 26450.840383721974 24505.79438357974 25612.982572130866 25599.016109256405 26766.736937444864 24750.899831305243 24680.712406836272 1.0750214204002744 1.0239674829010608 1.0727243863952254 1.0118767375213922 1.071721105440838 0.9929127644140417 1.0377732275279203 1.0372073418012753 1.0845204342655355 1.002843816795561 1.0 14.5910964179175 SPGS(ph)TPT(ph)TPTSSQAPQK ddPTM_A549_MK2206_60min_R1 1 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.373)PGS(0.451)T(0.249)PT(0.488)T(0.406)PT(0.019)S(0.007)S(0.007)QAPQK 49.528 0.029633 4657200.0 1314.0 1704.4 1468.5 1595.4 2275.2 1676.9 1212.3 1448.8 1702.5 2361.6 2107.6 True False 1535.7710757843731 1791.1466799189952 1676.7553816690088 1986.2730716202286 1940.5210939392148 1854.3484449638675 1432.5592177346257 1654.1718367639173 1316.8864683338409 1828.1129197975686 1584.2247531991452 0.9694148968970937 1.1306139967211073 1.0584075133802886 1.2537823737504397 1.2249026471910462 1.1705084403076274 0.9042651396790451 1.044152247604718 0.8312497741715954 1.1539479585241434 1.0 10.62956130904686 -7.762396516806939 24.999971585559635 0.9284522719115543 1.140481656424022 0.2374512146509824 0.11133494514219992 15.590972297988662 407234.4134570025 0.015277720501966909 0.021777701086414615 1.7282377339629556e-08 7.762396516806939 0.21202938451246778 SPGS(ph)TPTT(ph)PTSSQAPQK ddPTM_A549_PD325901_60min_R1 1 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.055)PGS(0.544)T(0.4)PT(0.004)T(0.894)PT(0.095)S(0.007)S(0.001)QAPQK 191.44 1.3566999999999999e-39 41864000.0 4082.0 4049.8 3514.5 3347.3 4181.1 3510.6 4525.6 4006.2 4633.2 5538.6 5403.6 True False 4496.401634990424 4391.090858774337 3753.015104405347 3554.055118730132 3887.43396001195 3482.0108375357195 4697.824184503341 3926.293198196896 4438.48271638701 5188.891850776612 4738.991456242642 0.9488098209308531 0.9265876293129801 0.7919438427055033 0.7499602292062373 0.8203082862475009 0.7347577790943028 0.991313073230999 0.8285081824793787 0.9365880393264323 1.0949358948392531 1.0 12.210364344651913 -8.934084349552071 0.8124428819046354 0.9860174917733391 0.8368150368754167 0.42490678759252665 0.08344718555760745 0.4078107507952098 0.5627576387013568 0.02046991417061302 0.019142459842636638 1.1638999524554001e-09 8.934084349552071 -0.1492024548979224 SPGST(ph)PTT(ph)PTSSQAPQK ddPTM_A549_MK2206_60min_R1 2 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.01)PGS(0.328)T(0.65)PT(0.013)T(0.989)PT(0.01)S(0.001)SQAPQK;SPGS(0.051)T(0.949)PT(0.003)T(0.997)PTSSQAPQK 193.47 9.958399999999998e-40 80910000.0 4464.4 4656.299999999999 3781.1000000000004 3450.5 4148.200000000001 3384.4 3155.6000000000004 3232.3 4527.5 3463.3 4062.3 True False 5217.881575899353 4893.2857813346745 4317.316835974594 4295.872654898831 3538.005275087312 3742.534961617101 3728.93167325199 3690.488423503596 3502.0284789318425 2680.9381246336875 3053.518796223614 1.7088093848816248 1.6025071754548752 1.4138825152522265 1.4068597384144732 1.158664973493164 1.2256466101487948 1.2211916553006588 1.2086018360416655 1.1468828956490835 0.8779831740185424 1.0 11.576257010516294 -2.000000000008149 0.2226260655077582 1.016636409229572 4.902379858930107 0.9060635573346592 0.07186634454813293 7.578647310588591 0.08841631261075496 0.03464163657984965 10.774377214556447 0.009999999999812362 2.000000000008149 3.885743449700535 up SPGST(ph)PTT(ph)PTSSQAPQK ddPTM_A549_PD325901_60min_R1 1 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 2 S(0.002)PGS(0.406)T(0.583)PT(0.01)T(0.943)PT(0.053)S(0.003)SQAPQK 193.96 4.3173e-40 42947000.0 3361.2 2773.9 3834.4 2989.5 4274.1 3135.0 3350.7 3334.2 4197.5 4465.2 5620.0 True False 3702.4265496153394 3007.666288002898 4094.6254421203184 3174.15462535289 3973.901960844533 3109.469599405937 3478.2127220733946 3267.6967653706997 4021.0936721994494 4183.266509964199 4928.775628115267 0.7511858581055199 0.6102258481490282 0.8307591481266267 0.6440046909919223 0.8062655435512548 0.6308807367226369 0.7056950822091776 0.6629834693084308 0.8158402766930355 0.8487435472009616 1.0 12.267013591584563 -9.663377006874969 0.7278711489328369 0.9819648386295213 0.7032164601445293 0.4882087500828436 0.0808456144198852 0.22021688447212662 0.2490167458930967 0.026995548333448683 0.015036538683354217 2.1708158962222976e-10 9.663377006874969 -0.278748378484992 SPGSTPTT(ph)PTSSQAPQK ddPTM_A549_MK2206_60min_R1 2 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SPGSTPT(0.021)T(0.977)PT(0.001)SSQAPQK;SPGST(0.002)PT(0.014)T(0.984)PTSSQAPQK 159.22 3.2042e-22 7593400.0 1646.99 2084.98 1726.39 1563.0 2815.0 1481.64 2097.14 1390.1100000000001 2763.4 3078.7 2651.0 True False 1924.9616469605044 2191.0965763303857 1971.2180615318773 1945.9350701657352 2400.9172290079505 1638.426161366966 2478.163192180148 1587.1623495333304 2137.4943122430154 2383.219531749989 1992.6835361220992 0.9660147294169016 1.099570773086434 0.9892278557025692 0.9765399446982235 1.204866294866019 0.8222209556442953 1.243631087053003 0.7964949379880253 1.072671236298127 1.1959849562404175 1.0 10.960496894428005 -9.070160761046889 0.006017968877077295 0.8519565418687873 1.1985670968719844 0.0 0.14124987509053233 78370.19906183303 308.36344844711533 8934.620096530682 8822.271560116824 8.508230341532425e-10 9.070160761046889 0.34661055500319704 SPGTS(ph)PLLSR ddPTM_A549_PD325901_60min_R1 1 SPGTSPLLSR 10 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 S(0.021)PGT(0.233)S(0.745)PLLSR 67.214 0.003551 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPIAEAVFR ddPTM_A549_PD325901_60min_R1 1 SPIAEAVFR 9 0 D3YTI2;P24666-2;F2Z2Q9;G5E9R5;P24666-4;P24666-3;P24666 D3YTI2 ACP1 Low molecular weight phosphotyrosine protein phosphatase 0 71.425 0.0086116 1585000.0 919.39 1084.6 1133.5 987.93 1148.4 971.19 1067.9 1088.5 1226.2 1151.6 1364.1 False True 1012.7257959808545 1176.0030484040312 1210.4261262892194 1048.9521923481789 1067.7403457649245 963.2809506370186 1108.5395188773027 1066.7890135882694 1174.667078225363 1078.8877794667142 1196.3243477423548 0.8465311250180785 0.9830135536598641 1.011787588017812 0.8768125419562934 0.8925174412607352 0.8052004896956879 0.926621213527322 0.8917222286760792 0.9818968245878616 0.9018355109989518 1.0 10.224392871054608 -8.819853247972752 5.59961536768776 0.9919673189305902 0.9066271636287166 0.09429434365675016 0.06086797341767861 0.1725746339034922 10.896982051321896 0.009828262103990869 0.010474931972906882 1.5140727808708265e-09 8.819853247972752 -0.08534015530187355 SPIIHS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SPIIHSPK 8 0 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 SPIIHS(1)PK;S(0.001)PIIHS(0.999)PK 72.006 0.0020797 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPIIHS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SPIIHSPK 8 0 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 SPIIHS(1)PK 59.542 0.0065926000000000005 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPIS(ph)PELHSAPLTPVAR ddPTM_A549_MK2206_60min_R1 2 SPISPELHSAPLTPVAR 17 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 S(0.105)PIS(0.895)PELHSAPLTPVAR;S(0.331)PIS(0.665)PELHS(0.004)APLTPVAR 67.227 0.0006207999999999999 7362400.0 1184.33 1401.02 1131.6100000000001 1125.0 2220.3999999999996 1420.26 1513.79 1407.98 2335.6 1868.8600000000001 2208.8 True False 1384.2159499114962 1472.3259337597465 1292.0893138920444 1400.6250505031687 1893.7821013460932 1570.5509705077122 1788.8260481848545 1607.5654767579092 1806.5903291867953 1446.6832280203598 1660.294000221234 0.8337173715781961 0.8867862761435982 0.7782292254985405 0.8436006215263897 1.1406305757255926 0.9459475070670836 1.0774152336553005 0.9682414539495422 1.0881147127834392 0.8713415984323195 1.0 10.697223017261452 -6.736644289331804 21.55582657637633 1.037968658409099 0.8351432041001169 0.5458802328376196 0.0757543107753709 18.03501982411385 15678.28227551658 0.007855712055938721 0.016340876643662898 1.8338158017498965e-07 6.736644289331804 -0.20282545430898213 SPIS(ph)PELHSAPLTPVAR ddPTM_A549_PD325901_60min_R1 1 SPISPELHSAPLTPVAR 17 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 S(0.215)PIS(0.785)PELHSAPLTPVAR 94.632 1.0554999999999999e-06 4898400.0 792.6 783.23 823.31 906.66 1095.7 756.32 870.76 1000.1 654.47 664.02 1190.0 True False 873.0641685187188 849.2355408459241 879.1847675652198 962.6623290257413 1018.7418119597938 750.1607806770967 903.897248298155 980.1522209367274 626.964901880732 622.0936638776378 1043.637544031525 0.8365587971721591 0.8137265142506902 0.8424234760364872 0.9224105960264901 0.9761452314415979 0.7187943601370061 0.8661026555315751 0.9391691843036264 0.6007496620510553 0.5960821047837335 1.0 10.027405034671581 -7.26342639539906 24.835450708704112 0.8164784276741606 0.8751307956181029 0.09096642911642006 0.12599376848168511 558.0270835496877 6974705.676990384 0.022613595277255413 0.03726800624296191 5.452222926002865e-08 7.26342639539906 0.05865236794394235 SPKAS(ph)LR ddPTM_A549_PD325901_60min_R1 2 SPKASLR 7 1 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 S(0.005)PKAS(0.995)LR;S(0.003)PKAS(0.997)LR 46.158 0.018001 9896400.0 2390.3 2829.7 3544.2999999999997 3837.6000000000004 3672.9 4708.5 4054.2 4008.2 3293.7 3763.0 5290.6 True False 2632.9614963541426 3068.1687498330148 3784.8375116073057 4074.6398361780443 3414.9281748171297 4670.1555370982005 4208.484799543367 3928.2533066279298 3155.277243150286 3525.403537802404 4639.889739876624 0.5674620829296159 0.6612589785193038 0.8157171234219772 0.8781760051665345 0.7359933891247885 1.00652295613007 0.9070225879236674 0.8466264344316904 0.6800328068214366 0.7598033003896653 1.0 12.179874806906478 -5.655080836534425 2.0891623184164514 0.8551566114252911 0.5635191532082365 0.48201194079335563 0.09601039543365213 0.3056082460257532 2.3425083507175333 0.017399738185060572 0.1238928001861213 2.212682817984468e-06 5.655080836534425 -0.29163745821705456 SPKS(ph)PNSVK ddPTM_A549_PD325901_60min_R1 1 SPKSPNSVK 9 1 A0A0C4DFM7;Q5TAX3;X6R5G7;E9PRG2;E9PKY2;Q5TAX3-2 A0A0C4DFM7 ZCCHC11 Terminal uridylyltransferase 4 1 S(0.321)PKS(0.623)PNS(0.056)VK 71.558 0.00085022 34522000.0 10147.0 10114.0 10952.0 12052.0 12870.0 11730.0 12201.0 12843.0 13453.0 15408.0 14934.0 True False 11177.115970173405 10966.342275086083 11695.2685797261 12796.424667922069 11966.055599089674 11634.474769069106 12665.315731643379 12586.8362898614 12887.617194067696 14435.136250454263 13097.212674425868 0.8533965392497811 0.837303520045864 0.8929585913010897 0.9770341969714572 0.9136337552535178 0.8883168547600238 0.9670237512729843 0.9610316792395798 0.9839969399926264 1.1021533061489395 1.0 13.676972192178466 -2.0000000000000027 0.18314638867514427 1.01276532503242 0.23063589400380874 0.6705377526814498 0.041634756394473754 17.755218588179268 0.18828945660624977 0.029159197904282546 3.9280707871142724 0.00999999999999994 2.0000000000000027 -0.7821294310286113 SPLDPMT(ph)SPGSGLILQANFVHSQR ddPTM_A549_MK2206_60min_R1 4 SPLDPMTSPGSGLILQANFVHSQR 24 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 S(0.08)PLDPMT(0.478)S(0.419)PGS(0.022)GLILQANFVHSQR;S(0.102)PLDPMT(0.474)S(0.421)PGS(0.002)GLILQANFVHSQR;S(0.013)PLDPMT(0.485)S(0.429)PGS(0.073)GLILQANFVHSQR;SPLDPMT(0.499)S(0.499)PGS(0.002)GLILQANFVHSQR 92.12100000000001 2.0162e-07 25224400.0 4299.91 5819.0 5951.26 5474.16 7174.29 5851.45 5678.85 5952.25 9024.099999999999 7638.62 7819.88 True False 5025.629685293746 6115.162245041442 6795.238156425948 6815.329445744384 6118.961444724494 6470.646555121847 6710.623536774957 6795.9996655011155 6980.1557585265255 5913.050436748008 5877.987978291388 0.8549914875386654 1.040349566488735 1.1560483249578177 1.1594663804884922 1.0409959100500155 1.1008267759340897 1.1416531577741673 1.1561778776343423 1.1875076615171158 1.0059650442610828 1.0 12.52110669304277 -5.3157546178853465 3.1039623875650233 1.1039452797700064 0.831297857438289 0.5795145705521952 0.061573009395997316 0.19899523599697785 2.998341036178088 0.010233752732101866 0.12238850262718025 4.833318137593071e-06 5.3157546178853465 -0.27264742233171746 SPLDPMT(ph)SPGSGLILQANFVHSQR ddPTM_A549_PD325901_60min_R1 4 SPLDPMTSPGSGLILQANFVHSQR 24 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 S(0.003)PLDPMT(0.525)S(0.471)PGS(0.002)GLILQANFVHSQR;S(0.002)PLDPMT(0.528)S(0.469)PGS(0.001)GLILQANFVHSQR;S(0.013)PLDPMT(0.513)S(0.45)PGS(0.024)GLILQANFVHSQR;S(0.016)PLDPMT(0.485)S(0.426)PGS(0.073)GLILQANFVHSQR 112.45 3.3117e-12 43881100.0 4936.4 5375.299999999999 5935.9 5359.1 6931.700000000001 6754.0 6860.799999999999 7308.799999999999 5262.1 6749.8 6972.000000000001 True False 5437.53969401439 5828.295395616991 6338.7458694664065 5690.119435600828 6444.8413050668105 6698.997663281563 7121.891498373816 7163.020250357317 5040.952236445675 6323.616476071923 6114.488199149404 0.889287789413154 0.9531943158264292 1.0366764417581507 0.9305961922360713 1.0540279243589614 1.0955941765025357 1.1647567656381368 1.1714832079247084 0.8244275027216391 1.0342020902013698 1.0 12.57801603060196 -8.773914243887337 24.99991395252629 0.9170907775060221 1.0373898887579032 0.0972620763928711 0.0988442208077057 264.41412748500784 529890.2949803509 0.018863735197217478 0.02015001564364251 1.6830063559534565e-09 8.773914243887337 0.12029911125188109 SPLDPMTS(ph)PGSGLILQANFVHSQR ddPTM_A549_MK2206_60min_R1 1 SPLDPMTSPGSGLILQANFVHSQR 24 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 S(0.039)PLDPMT(0.305)S(0.586)PGS(0.07)GLILQANFVHSQR 69.704 3.7628e-05 8090400.0 1117.7 1178.6 1653.8 1513.6 1681.2 1336.5 872.05 1025.3 1976.4 1535.2 1897.2 True False 1306.3404348585955 1238.5857057923781 1888.3337080042268 1884.4320679480857 1433.897707072173 1477.9275429031013 1030.4901970019637 1170.6394148495608 1528.7485556622637 1188.3972537572938 1426.0728799437366 0.9160404445179092 0.8685290374789573 1.3241495119651445 1.3214135788224464 1.005486975622694 1.036361860385011 0.7226069659515719 0.8208833021884173 1.0719988979262953 0.8333355682384059 1.0 10.47783199775291 -6.963378025792974 24.999142765946026 0.9924173613233273 1.1131235646714328 0.14128554653778547 0.17120836735926234 337.97297061197537 230708.0534264563 0.025593345684306615 0.048366789390207644 1.0879826611732411e-07 6.963378025792974 0.12070620334810556 SPLDPMTSPGS(ph)GLILQANFVHSQR ddPTM_A549_PD325901_60min_R1 1 SPLDPMTSPGSGLILQANFVHSQR 24 0 Q08499-10;Q08499;A0A1B0GW84;Q08499-2;Q08499-9;A0A087WSZ7;Q08499-11;A0A1W2PQN6;Q08499-6;Q08499-7;Q08499-12 Q08499-10;Q08499-6 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 S(0.002)PLDPMT(0.305)S(0.275)PGS(0.419)GLILQANFVHSQR 64.954 9.4445e-05 7760600.0 4105.5 4373.9 4368.5 4661.6 5283.3 5396.6 5711.6 4753.7 6327.9 5681.0 4561.3 True False 4522.287337690641 4742.503903203383 4664.972679924527 4949.536444738266 4912.219234395527 5352.65187883703 5928.958063507442 4658.883724294493 6061.960368865012 5322.3006904744725 4000.289016463018 1.1304901518563686 1.1855403156336484 1.166158910200246 1.2372947115492559 1.2279660829953782 1.3380662889127313 1.4821324257090098 1.1646367812728171 1.515380599730988 1.3304790400320508 1.0 11.965888521550843 -6.379178764030164 1.783518523006972 1.267542310909772 1.1572205280502958 0.14099326001804635 0.1352870803324519 0.9894982678071348 6.040550142232517 0.028453163691761322 0.08954931987202788 4.17658414957306e-07 6.379178764030164 -0.11032178285947625 SPLDQRS(ph)PYGSR ddPTM_A549_PD325901_60min_R1 2 SPLDQRSPYGSR 12 1 O14646 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.022)PLDQRS(0.854)PY(0.001)GS(0.124)R;S(0.019)PLDQRS(0.96)PYGS(0.021)R 54.281000000000006 0.005836 33864000.0 6208.200000000001 6737.2 6931.8 6858.6 8474.0 7077.7 6803.4 8404.6 8106.3 7219.299999999999 9015.5 True False 6838.451893764716 7304.9674882054605 7402.233632299609 7282.240144989245 7878.8154737129635 7020.061557803956 7062.30710996333 8236.96365971885 7765.620401417601 6763.472165946558 7906.650653963205 0.8648987027568931 0.9239016377363086 0.9362034515321912 0.9210271787256752 0.9964795231927581 0.887867931067013 0.8932109712503046 1.0417766030411468 0.9821630853925597 0.8554155813822849 1.0 12.94885096694097 -2.0000000000030584 0.14466283472131974 1.0180973885035796 0.5442993760805895 0.0 0.060193770059159074 45.50322277464743 0.4154028557100725 0.08123633383499698 4.52588698095032 0.009999999999929577 2.0000000000030584 -0.47379801242299 SPLELGEKLS(ph)PLPGGPGAGDPR ddPTM_A549_MK2206_60min_R1 1 SPLELGEKLSPLPGGPGAGDPR 22 1 Q15742-2;Q15742-3;Q15742 Q15742-2 NAB2 NGFI-A-binding protein 2 1 S(0.007)PLELGEKLS(0.993)PLPGGPGAGDPR 51.473 0.0027430999999999996 25518000.0 1279.4 1275.9 1176.1 812.97 1515.6 1410.6 1250.4 1365.4 1847.7 1616.3 1941.8 True False 1495.3314416731569 1340.837860190475 1342.8886648831601 1012.1476864956103 1292.6572477031793 1559.8687557195012 1477.5814945602376 1558.9496313621282 1429.1989001705956 1251.1767074308987 1459.597469046357 1.0244820735748104 0.9186353694258769 0.920040417554677 0.6934430265605402 0.8856258489868102 1.0686979039081628 1.0123212227311074 1.0680681930619433 0.9791733203705658 0.8572066846953138 1.0 10.51135483905459 -7.231235982753541 18.789930340240186 1.0031826590260264 0.8810437152111011 0.2641321060330164 0.09005296957229536 29.225246568383447 18180.50424834154 0.011661493710152222 0.020189269314325835 5.871702149354327e-08 7.231235982753541 -0.1221389438149253 SPLELGEKLS(ph)PLPGGPGAGDPR ddPTM_A549_PD325901_60min_R1 1 SPLELGEKLSPLPGGPGAGDPR 22 1 Q15742-2;Q15742-3;Q15742 Q15742-2 NAB2 NGFI-A-binding protein 2 1 S(0.005)PLELGEKLS(0.995)PLPGGPGAGDPR 54.167 0.0020054 27327000.0 3814.5 3825.1 3791.7 3967.2 4784.0 3923.9 4183.6 4216.1 4044.0 4442.2 4614.7 True False 4201.745231913519 4147.454601189619 4049.027563344359 4212.244933835089 4447.988343904038 3891.9450593649 4342.809187353763 4132.006578033534 3874.044743388819 4161.718733889405 4047.121154993512 1.0382059421989938 1.0247913127266555 1.0004710529479688 1.0408003053325547 1.0990499600971715 0.9616576599301582 1.073061324590053 1.020974272770482 0.9572346848595961 1.0283158261161758 1.0 11.982680322968172 -8.620369973097874 6.256433145251138 0.9799291797321082 1.033318993095585 0.13624570673570313 0.03758646046304428 0.17982871189329475 9.85070756485836 0.005803510665360226 0.006581498492980011 2.3967902365520223e-09 8.620369973097874 0.05338981336347681 SPLLAGGS(ph)PPQPVVPAHK ddPTM_A549_MK2206_60min_R1 1 SPLLAGGSPPQPVVPAHK 18 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 S(0.002)PLLAGGS(0.998)PPQPVVPAHK 69.122 0.00045068 34118000.0 2241.8 2450.0 2373.9 2454.6 3546.7 2518.6 2584.0 2524.5 4142.4 3672.8 4157.5 True False 2620.1610332522123 2574.694535203907 2710.5547160667757 3055.97711019118 3024.98512828508 2785.116580288628 3053.4793521622305 2882.355605957004 3204.1530140535087 2843.1119291296172 3125.078008837277 0.8384306010418839 0.8238816848485178 0.8673558574863448 0.9778882644046998 0.9679710777557716 0.8912150584442096 0.9770890017872911 0.9223307699219384 1.025303370025522 0.909773106811958 1.0 11.609676487735376 -4.465449315411196 0.2794936937200033 1.0164463100159336 0.5365244974470205 0.41352416204858466 0.04920042394192639 4.91057955696258 0.1970123822359099 0.016954297648307224 0.8757307859307534 3.424133468424472e-05 4.465449315411196 -0.4799218125689131 SPLLAGGS(ph)PPQPVVPAHK ddPTM_A549_PD325901_60min_R1 1 SPLLAGGSPPQPVVPAHK 18 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 S(0.002)PLLAGGS(0.998)PPQPVVPAHK 80.303 8.695899999999999e-05 61414000.0 3896.4 4601.0 4449.2 5008.1 5299.9 5631.2 4914.2 5267.4 6326.9 4967.5 4778.8 True False 4291.959659621922 4988.742417210902 4751.149467213054 5317.438962779666 4927.653307662416 5585.3413742184075 5101.212570153425 5162.337574804637 6061.002395387419 4653.85120224115 4191.037895309118 1.0240803750368763 1.190335793144373 1.1336450745365128 1.2687642287203582 1.175759664014913 1.332686917593822 1.2171716642941917 1.231756358152395 1.4461817208026888 1.1104292823145414 1.0 12.033091851019039 -4.225610710509401 0.9289615758628352 1.2249816573929486 2.4027402470753094e-11 0.1953380164070977 0.11081211875658277 20.210332991099232 3.0661302816599223 0.023709705120065233 39.37484627112637 5.948251043953072e-05 4.225610710509401 -1.2249816573689212 SPLLAGGS(ph)PPQPVVPAHKDK ddPTM_A549_MK2206_60min_R1 2 SPLLAGGSPPQPVVPAHKDK 20 1 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 S(0.001)PLLAGGS(0.999)PPQPVVPAHKDK;S(0.001)PLLAGGS(0.999)PPQPVVPAHKDK 72.033 0.00026637 33685000.0 2256.7 2798.8999999999996 3134.2 3137.3 3331.8999999999996 2439.3 2146.5 2830.7 3768.8999999999996 3704.2 3682.0 True False 2637.5757889821875 2941.352054931515 3578.6766886121954 3905.938640838751 2841.7819237412405 2697.4251069237066 2536.491265253958 3231.960393655174 2915.250167696571 2867.4186473213717 2767.6577819696586 0.9529992494610747 1.0627585802310586 1.2930343888345037 1.411279481980974 1.0267822641420754 0.9746237864003657 0.916475758592095 1.1677601236360535 1.0533275416810657 1.0360452314594748 1.0 11.434449850910651 -6.927998933077731 24.99998287691983 1.0244363930391425 1.1846301420376644 0.26679733243995807 0.12353581097221163 46.281715232302346 16068.73574560207 0.018131686143720255 0.034265665096523956 1.180323535324578e-07 6.927998933077731 0.1601937489985219 SPLLAGGS(ph)PPQPVVPAHKDK ddPTM_A549_PD325901_60min_R1 2 SPLLAGGSPPQPVVPAHKDK 20 1 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 S(0.001)PLLAGGS(0.999)PPQPVVPAHKDK;S(0.001)PLLAGGS(0.999)PPQPVVPAHKDK 88.23899999999999 2.0066e-06 65705000.0 3254.8 3712.2 3691.0 3804.1 4302.0 4626.8 4465.2 4972.5 4184.4 4670.9 4616.9 True False 3585.2248999428803 4025.0401219670352 3941.4934557860697 4039.070617262062 3999.842361094311 4589.12087481065 4635.125629451193 4873.319586649211 4008.54421964297 4375.978576859218 4049.0505689404577 0.8854482893951731 0.9940701044443351 0.9734364608880316 0.9975352365922644 0.9878469762211384 1.1333819611967741 1.1447438234055194 1.203570936859019 0.9899960870807085 1.0807418930320523 1.0 11.983367945731297 -4.681123591995968 0.83120199180086 1.0302222341615865 0.639820908163417 0.2749984969339143 0.07569625299885686 7.047358999726208 1.8104124429491997 0.013282828929024337 3.1793714604097123 2.0838977608145264e-05 4.681123591995968 -0.39040132599816957 SPLLNS(ph)PTVAK ddPTM_A549_PD325901_60min_R1 2 SPLLNSPTVAK 11 0 O43365 O43365 HOXA3 Homeobox protein Hox-A3 1 S(0.002)PLLNS(0.926)PT(0.072)VAK;SPLLNS(0.977)PT(0.023)VAK 161.21 1.9714e-13 20539600.0 7039.6 7312.5 7438.799999999999 7213.1 8602.599999999999 7764.799999999999 7534.6 7775.2 7981.0 7538.3 7573.4 True False 7754.2550097203775 7928.750038220983 7943.641701138277 7658.636804861327 7998.383053358875 7701.566043211237 7821.333326091326 7620.117536473599 7645.586324675118 7062.330451505671 6641.919811738107 1.1674719402689064 1.1937437161178448 1.1959857881902862 1.1530757705515204 1.204227584805153 1.1595391485456423 1.1775711763741668 1.1472763526904897 1.1511109048867552 1.0632965545631223 1.0 12.697384589871556 -10.672936314892807 0.40453941620546824 0.9484205045486891 1.1854983052244203 0.8356714674020999 0.023838085357038713 0.2929142833976151 0.06254149372507685 0.029355568274443862 0.0042408041279814275 2.1235558382013123e-11 10.672936314892807 0.23707780067573125 SPMFPALGEAS(ph)SDDDLFQSAKPK ddPTM_A549_MK2206_60min_R1 1 SPMFPALGEASSDDDLFQSAKPK 23 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 S(0.01)PMFPALGEAS(0.495)S(0.495)DDDLFQSAKPK 51.175 0.0020392 2571500.0 1115.4 892.93 1198.0 1219.7 1509.2 1014.9 1283.0 1273.1 1915.5 1515.6 1782.4 True False 1303.6522510881966 938.3763229876022 1367.8944141909926 1518.5265547544132 1287.1986792251514 1122.2960443639029 1516.104492579002 1453.5658237052328 1481.6423084249463 1173.224907370085 1339.7808882625538 0.9730339210755504 0.7003953640542682 1.0209836744013394 1.1334141037969716 0.9607531279942411 0.8376713343174432 1.1316062991054507 1.0849280180360215 1.1058840452235144 0.8756841642154928 1.0 10.387781362013415 -5.882504375248319 8.224980862787747 1.0433933196546485 0.8378329589984261 0.25458840167787566 0.11197085367657968 0.16820032144696537 11.332291096623969 0.013468445826543893 0.04219313674960635 1.3106768380410005e-06 5.882504375248319 -0.2055603606562224 SPMFPALGEAS(ph)SDDDLFQSAKPK ddPTM_A549_PD325901_60min_R1 1 SPMFPALGEASSDDDLFQSAKPK 23 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 S(0.001)PMFPALGEAS(0.5)S(0.5)DDDLFQSAKPK 79.635 1.5572999999999998e-05 5354200.0 1990.8 2808.6 2194.1 2441.9 3211.0 2662.8 2135.8 2967.0 3162.6 2524.2 2780.8 True False 2192.9045504504984 3045.290578782557 2343.0048201951263 2592.7306170427237 2985.470437348636 2641.115039648527 2217.0790377546055 2907.820857433526 3029.686920237754 2364.8215812173316 2438.7792289435843 0.8991812479067274 1.2486946512586536 0.960728544998333 1.0631264143437154 1.224165927738307 1.0829660218127204 0.909093784071216 1.1923263995868614 1.2422965081386785 0.9696743162117675 1.0 11.251943448403313 -5.230239055106417 23.248450847637056 1.1068288936342285 0.8991803222761338 0.16324683573958032 0.11782220794019065 6436.959945917282 4796200.728808759 0.016486347800530543 2.663249931446585 5.88519618662304e-06 5.230239055106417 -0.20764857135809478 SPMFPALGEASS(ph)DDDLFQSAKPK ddPTM_A549_PD325901_60min_R1 1 SPMFPALGEASSDDDLFQSAKPK 23 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;Q5SRD0;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 SPMFPALGEAS(0.35)S(0.65)DDDLFQSAKPK 116.08 7.9977e-16 7196800.0 2623.3 2446.8 2666.9 3073.3 3216.3 2886.8 2789.2 3340.9 2660.6 2598.9 3335.9 True False 2889.6154848286096 2653.000423045347 2847.8918713724916 3263.1307610292833 2990.3981836326407 2863.2908579154882 2895.344532308806 3274.263128614654 2548.78423448573 2434.805010468951 2925.605448012405 0.9876982854238783 0.9068209880617155 0.9734367541963971 1.115369389008414 1.0221467784264124 0.978700275479986 0.9896565287967461 1.1191745390134953 0.8711988953320143 0.832239703451163 1.0 11.514519503018526 -8.785959998198091 24.999965962357773 0.9391772764905898 1.0088381169201992 0.2811358280637257 0.0718838580941797 312.0106605618174 318108.5635425864 0.01279925417072572 0.013628951339761894 1.6369672915353532e-09 8.785959998198091 0.0696608404296094 SPNPST(ph)PR ddPTM_A549_MK2206_60min_R1 2 SPNPSTPR 8 0 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 SPNPS(0.002)T(0.998)PR;SPNPS(0.001)T(0.999)PR 98.943 0.0025668 510220000.0 6241.8 6924.5 5840.4 5466.0 7418.3 5692.5 6224.4 7059.0 8737.900000000001 9408.5 10033.400000000001 True False 7295.263242641474 7276.927473069161 6668.65654143662 6805.170245378066 6327.077896962584 6294.876571624316 7355.292910061377 8059.634867280847 6758.779601559038 7283.11331551296 7541.829872247252 0.9673067897602537 0.9648755801091603 0.8842226163144076 0.9023234892131448 0.8389314004874647 0.8346617038907854 0.9752663524176935 1.0686577400716817 0.8961723767371477 0.9656957845620029 1.0 12.88069889135573 -7.799324642997432 24.99977106304932 0.9620803064533554 0.8985143508509077 0.32758024243517636 0.05584860414651139 213.8188118422518 141094.24774876406 0.010104252990999195 0.013961199781407006 1.5873597248246865e-08 7.799324642997432 -0.06356595560244771 SPNPST(ph)PR ddPTM_A549_PD325901_60min_R1 2 SPNPSTPR 8 0 O76021;O76021-2;J3QSV6 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 1 SPNPS(0.001)T(0.999)PR;SPNPS(0.001)T(0.999)PR 98.943 0.0025668 731050000.0 10257.099999999999 9955.599999999999 9818.0 9882.2 10950.9 10265.8 10217.1 10025.3 10597.3 11816.9 11660.900000000001 True False 11298.393241122074 10794.593351181235 10484.30852043013 10492.60104989542 10181.746562554084 10182.198728415142 10605.91733151164 9825.337526804296 10151.932334103438 11070.778917315225 10226.683224535464 1.1047954642826332 1.055532191051275 1.0251914809756286 1.0260023528177715 0.9956059397759023 0.9956501540975088 1.0370828057005161 0.960755047465607 0.9926906027310315 1.0825385586164085 1.0 13.320050697516844 -3.1022449772252614 0.5198332420106474 0.9954118866849315 2.1701566997359776 0.41300877924114243 0.031231637558787096 9.063644382686949 0.2644699371766999 0.0028739523472952585 10.447751771490413 0.0007902327470504776 3.1022449772252614 1.174744813051046 SPPAS(ph)PESWK ddPTM_A549_PD325901_60min_R1 1 SPPASPESWK 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 S(0.366)PPAS(0.624)PES(0.01)WK 88.338 0.00070588 13839000.0 6582.3 6383.1 5613.2 5908.8 5679.5 6609.4 5306.2 5246.1 8261.7 6400.6 8300.1 True False 7250.530250366849 6921.026238491396 5994.145506913668 6273.773156141553 5280.591513211328 6555.5752377395875 5508.130344664054 5141.462420014167 7914.489479835663 5996.465023666771 7279.240318668954 0.9960558977248666 0.9507896340145753 0.8234575648698638 0.8618719648603035 0.7254316772133867 0.9005850817875329 0.7566902730958666 0.7063185435474548 1.0872686067991868 0.8237762130599989 1.0 12.829572179361177 -8.77747395885505 24.999599895508513 1.0412101906002134 0.8394142606041888 0.14418292771956565 0.1087486400002412 140.45497878467108 218983.30525108712 0.01581478168321418 0.01686175656238976 1.669267896772027e-09 8.77747395885505 -0.20179592999602458 SPPERPVPGT(ph)PKEPSLGEQSR ddPTM_A549_MK2206_60min_R1 2 SPPERPVPGTPKEPSLGEQSR 21 2 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SPPERPVPGT(0.915)PKEPS(0.08)LGEQS(0.005)R;SPPERPVPGT(1)PKEPSLGEQSR 89.727 9.9214e-07 25732000.0 5596.8 4920.5 4904.4 4556.799999999999 6495.4 5125.299999999999 4796.9 4616.1 7142.0 7282.8 7676.799999999999 True False 6541.403011377453 5170.932432845233 5599.917666910106 5673.216204562524 5539.935264404347 5667.655844101207 5668.434637920668 5270.446311213358 5524.348403430424 5637.610421875729 5770.438691098505 1.1336058420425192 0.8961073342347312 0.9704492096153028 0.9831516299296348 0.9600544362338114 0.9821880358670387 0.9823229985381894 0.9133527957490586 0.9573532792146807 0.976981252841716 1.0 12.494465286966818 -5.244355240700307 24.80834232593963 0.9701055859111785 1.1336059872543685 0.7156001574887845 0.030699110524127805 1396.4973109374264 2027857.155270747 0.00434530287861326 0.174988065985804 5.696980845945045e-06 5.244355240700307 0.16350040134319 SPPERPVPGT(ph)PKEPSLGEQSR ddPTM_A549_PD325901_60min_R1 2 SPPERPVPGTPKEPSLGEQSR 21 2 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(0.001)PPERPVPGT(0.947)PKEPS(0.05)LGEQS(0.002)R;S(0.003)PPERPVPGT(0.994)PKEPS(0.003)LGEQSR 66.36 0.00043017 31755000.0 5917.7 5346.1 5649.9 4864.5 6988.9 5486.0 5725.1 5579.7 5752.6 6106.6 6819.6 True False 6518.4605476195065 5796.6346091395835 6033.336189608698 5164.969116918927 6498.023774396096 5441.323834877499 5942.971813394929 5468.408506310028 5510.838227205369 5721.028233841127 5980.832433006206 1.0898918537905045 0.969201975489215 1.0087786703925596 0.8635869964213003 1.0864748088469567 0.9097937278511031 0.993669673906539 0.9143223067296984 0.9214165902379914 0.9565605286429182 1.0 12.546130582361398 SPPLIGSESAYES(ph)FLSADDKASGR ddPTM_A549_PD325901_60min_R1 1 SPPLIGSESAYESFLSADDKASGR 24 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPPLIGS(0.013)ES(0.013)AY(0.012)ES(0.793)FLS(0.163)ADDKAS(0.006)GR 42.973 0.016368999999999998 1899100.0 1050.5 841.87 904.77 905.91 898.08 1584.3 1023.1 726.8 1154.9 1218.8 917.13 True False 1157.1459866627736 912.8173394430215 966.173133023994 961.8660032291143 835.0019590078045 1571.3979860729908 1062.0346303618016 712.3034038364297 1106.363569272935 1141.844759998291 804.3288241660778 1.438647915996911 1.1348808000128852 1.2012165969878241 1.1958616604674959 1.0381350685442965 1.953676082294085 1.3203985713963582 0.8855873150821626 1.375511527166771 1.4196243199193406 1.0 9.651641611589739 -10.958213308519094 0.9343457732549489 0.9791729199468537 1.2848479895226599 0.0 0.2871492969891187 1.1271008547940402 1.536579286869857 0.2564289924202071 0.04497941942331344 1.100998409220125e-11 10.958213308519094 0.30567506957580615 SPPLIGSESAYESFLSADDKAS(ph)GR ddPTM_A549_PD325901_60min_R1 1 SPPLIGSESAYESFLSADDKASGR 24 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPPLIGSESAYESFLS(0.001)ADDKAS(0.999)GR 94.60600000000001 4.3804999999999994e-08 6883700.0 1651.3 1742.7 2107.7 1647.7 1800.8 1553.3 1385.1 1935.0 1867.2 1370.2 1892.0 True False 1818.9387603771902 1889.563445006183 2250.741196629719 1749.4746868017926 1674.3180204227417 1540.6504397949739 1437.8107384558023 1896.4049070218646 1788.7280773629077 1283.6853381602054 1659.295994376171 1.096211144088875 1.138774185805579 1.3564434581039941 1.0543475622982657 1.009053252763512 0.9284964497092015 0.8665185375779574 1.142897297076184 1.0780042158996461 0.7736325179539892 1.0 10.696355549815669 -6.4957292596801866 23.899568325877304 1.0230793540717886 1.1936543574283718 0.3668726351533509 0.11785611855344735 321.10320225261535 282664.9982785131 0.013020726156570166 0.03016526156922518 3.1935280884696395e-07 6.4957292596801866 0.17057500335658315 SPPLLES(ph)PDATR ddPTM_A549_MK2206_60min_R1 2 SPPLLESPDATR 12 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 SPPLLES(0.999)PDAT(0.001)R;SPPLLES(0.999)PDAT(0.001)R 110.92 7.4496e-05 31534000.0 4458.0 5774.1 5094.4 4929.5 6716.8 5620.0 5059.6 5392.0 8298.3 7716.1 7836.0 True False 5210.4014123643365 6067.977026824847 5816.862523918691 6137.227721293664 5728.76761769116 6214.704669745924 5978.863827476791 6156.332512307454 6418.748299662094 5973.027650935813 5890.104937402027 0.8846024761423877 1.0301984584847268 0.9875651768072504 1.0419555825436002 0.9726087529126385 1.0551093292553577 1.0150691525903295 1.0451991225512618 1.0897510940600046 1.0140783083518985 1.0 12.524077621828333 -4.223422783733604 1.0238942367571608 1.0371650052173536 9.707702847041459e-34 0.568047192956384 0.033611442457590235 7.619839456577634 1.2240477951980635 0.005814604248180513 14.258227645044437 5.9782932751529116e-05 4.223422783733604 -1.0371650052173536 SPPLLES(ph)PDATR ddPTM_A549_PD325901_60min_R1 2 SPPLLESPDATR 12 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 SPPLLES(1)PDATR;SPPLLES(0.973)PDAT(0.027)R 135.65 3.5172e-08 66028000.0 5091.5 4932.7 5098.5 4565.3 5655.799999999999 5701.1 5691.2 5227.7 4927.8 5121.9 5708.6 True False 5608.385331835802 5348.395940312159 5444.51486977114 4847.288212451431 5258.556119450763 5654.672131793681 5907.781730344136 5123.429422448684 4720.701702886106 4798.502359891075 5006.478389796942 1.1202256147286143 1.0682950217486278 1.087493932035521 0.9682031629917875 1.0503503081462506 1.1294709956838602 1.1800274105614885 1.023359939571513 0.9429186217015857 0.9584586182715347 1.0 12.289580437776282 -8.519179111213148 20.865078480386398 0.9735761138426828 1.0828357203843941 0.5081483248857142 0.05162344084091306 12.19274441128681 68765.95039403255 0.009343789438579522 0.010739947453079456 3.0256653294565506e-09 8.519179111213148 0.1092596065417113 SPPLS(ph)PVGTTPVK ddPTM_A549_MK2206_60min_R1 2 SPPLSPVGTTPVK 13 0 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 1 S(0.007)PPLS(0.993)PVGTTPVK;SPPLS(1)PVGTTPVK 153.39 1.2948e-13 14666700.0 2902.9 3023.8 3601.6000000000004 4109.8 5668.1 3710.0 4219.6 4383.4 6227.5 5968.6 6768.0 True False 3392.838550909024 3177.698504305951 4112.361036853324 5116.701184495936 4834.329998486665 4102.589737501314 4986.246700612907 5004.7603735995 4816.981193274002 4620.2891146272705 5087.318812702514 0.6669207643203829 0.6246312883658015 0.8083552826658277 1.0057756104689286 0.9502706978803527 0.8064345657397306 0.9801325382169405 0.9837717190247888 0.9468604918658712 0.9081972812655031 1.0 12.312689792680695 -5.988416302595805 3.1092381089377814 0.9630230470368623 0.646145170995744 0.813770290165797 0.055566759734845636 0.06867003318372494 1.3578686820177333 0.007809226632230763 0.026841052029405246 1.0270313424829765e-06 5.988416302595805 -0.3168778760411183 SPPLS(ph)PVGTTPVK ddPTM_A549_PD325901_60min_R1 2 SPPLSPVGTTPVK 13 0 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 1 SPPLS(1)PVGTTPVK;SPPLS(1)PVGTTPVK 206.18 3.3726e-31 28938000.0 10331.5 10391.3 11272.5 11143.6 13139.7 12045.8 11930.2 12208.4 12165.0 12922.4 12992.6 True False 11380.346274351681 11267.011319270523 12037.519637049165 11831.91486304816 12216.812801504153 11947.702998572257 12384.210289455941 11964.893884695472 11653.747354927042 12106.477458649413 11394.592566877294 0.9987497321697113 0.9888033515145039 1.056423875307379 1.038379809861926 1.07215880952312 1.0485414839055138 1.0868497681483889 1.0500501719978979 1.0227436642888907 1.0624756776158442 1.0 13.476061719049156 -4.337678487127183 16.179656794142286 1.026036238745528 1.0368863285092211 0.0 0.03320994505987549 0.0 0.0 0.004692095983103497 0.0 4.595380879263925e-05 4.337678487127183 0.010850089763693171 SPPLSPVGTT(ph)PVK ddPTM_A549_PD325901_60min_R1 1 SPPLSPVGTTPVK 13 0 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 1 SPPLSPVGT(0.337)T(0.663)PVK 122.66 7.4749e-06 11716000.0 6303.7 6199.8 5513.7 6174.2 7766.1 7338.7 6863.2 7290.0 7045.6 7238.6 7666.3 True False 6943.646983461324 6722.278904199993 5887.892838571566 6555.566311374415 7220.635927590546 7278.936060338231 7124.382831687141 7144.595231105636 6749.49793373399 6781.553560652792 6723.393700679728 1.0327592422200904 0.999834191402532 0.8757322716318556 0.9750382921517231 1.0739570295966079 1.082628265484786 1.0596408820990022 1.0626471614154211 1.0038825977201995 1.0086503724997071 1.0 12.714973916365725 -6.549806451384091 24.12638053986283 1.0214892441431895 0.9646318078203149 0.28833728215992827 0.04705960531230202 175.20440450139924 156977.04637130685 0.007403009353969483 0.015410942105342515 2.8196392578108044e-07 6.549806451384091 -0.056857436322874655 SPPPES(ph)MDTPTSTR ddPTM_A549_MK2206_60min_R1 1 SPPPESMDTPTSTR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.159)PPPES(0.685)MDT(0.141)PT(0.01)S(0.002)T(0.003)R 41.996 0.030907999999999998 3479700.0 295.96 594.76 345.73 334.03 725.34 433.09 495.4 582.11 680.78 658.63 800.59 True False 345.9108124727116 625.0307435746429 394.75971270304814 415.86736499517633 618.6434468520882 478.9192963381247 585.4077674385329 664.6258751371088 526.5844169822686 509.84502556159873 601.7814078400569 0.5748113982355678 1.0386341874835143 0.6559852257980833 0.691060507315817 1.0280202059956511 0.7958359798071615 0.9727913820729474 1.1044307226483057 0.8750426818141674 0.8472262833635211 1.0 9.233095724775497 -6.7587272189931875 24.999996039698917 0.9485973328561692 0.7554352303775058 0.34911250442027064 0.13473985650189124 61.96745094821929 571188.0863657478 0.017820653899499744 0.035818900180335296 1.7429012485198984e-07 6.7587272189931875 -0.1931621024786634 SPPPES(ph)MDTPTSTR ddPTM_A549_PD325901_60min_R1 1 SPPPESMDTPTSTR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.004)PPPES(0.577)MDT(0.412)PT(0.005)S(0.001)T(0.001)R 47.773999999999994 0.010998 3959600.0 1103.7 1067.1 1039.4 1101.5 1276.1 1173.2 1265.7 1134.1 1119.6 786.07 1277.4 True False 1215.746811499003 1157.0282619877755 1109.9399344199517 1169.537153311995 1186.4711383060082 1163.6458481732207 1313.866906117616 1111.4794858157618 1072.547105513877 736.4374060484544 1120.2878981057722 1.0852092694696036 1.0327954661869734 0.9907631210661855 1.0439612489695689 1.0590769928981125 1.0387025068652083 1.1727939829923675 0.9921373672741587 0.9573852465311665 0.6573644214970565 1.0 10.129653816762362 -8.49421450652321 24.944349444437478 0.9796071412482223 1.0571478041810145 0.24310262693294393 0.10635674733991428 509.9248948908292 443750.4183233841 0.007230554527689498 0.008732770811471235 3.2046860765218076e-09 8.49421450652321 0.07754066293279216 SPPPESMDT(ph)PTSTR ddPTM_A549_PD325901_60min_R1 2 SPPPESMDTPTSTR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.021)PPPES(0.071)MDT(0.888)PT(0.014)S(0.004)T(0.003)R;S(0.052)PPPES(0.262)MDT(0.66)PT(0.025)S(0.001)TR 49.298 0.013227000000000001 5640100.0 867.68 1176.11 1220.3 908.26 1530.37 1427.8400000000001 1094.65 1125.8899999999999 1178.13 1884.8899999999999 1410.99 True False 955.7662348477448 1275.2249172584034 1303.1168962600204 964.3611573918773 1422.882090689887 1416.212144438843 1136.3075047654643 1103.4332407063814 1128.617293157435 1765.8777237226595 1237.447175002556 0.7723693214183229 1.030528771667178 1.0530687067569804 0.7793150098628537 1.149852793261214 1.1444627076189477 0.9182674846408028 0.8917012887472164 0.912052906949425 1.4270328135170798 1.0 10.273151224409094 -5.25073595861046 24.086511007374053 0.9727376651454154 0.7723691304975979 0.07628355848641144 0.17278687044128505 1061.3806782132915 2388406.5190069987 0.014177101186177581 0.2743051458894608 5.613891844414455e-06 5.25073595861046 -0.20036853464781745 SPPPESVDT(ph)PTSTK ddPTM_A549_MK2206_60min_R1 2 SPPPESVDTPTSTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.001)PPPES(0.01)VDT(0.98)PT(0.007)S(0.001)TK;S(0.005)PPPES(0.052)VDT(0.922)PT(0.017)S(0.003)T(0.001)K 105.14 2.3264e-05 6102900.0 2010.59 2423.5 2401.6000000000004 2272.8 3295.7 2672.0 3220.2 2768.7 4372.3 4501.2 4298.0 True False 2349.9284377939885 2546.8457983945577 2742.1829925885536 2829.6361020298696 2810.9068957873897 2954.7492664699475 3805.2686570560454 3161.1717037881394 3381.981031128371 3484.3757937808327 3230.687981234547 0.7273770947375757 0.7883292392171306 0.8487922722703415 0.8758617726211297 0.8700644915617182 0.9145882498194225 1.177850872371133 0.9784825158448626 1.046829978869086 1.0785243929527801 1.0 11.65762570698853 -6.923215754169199 0.99066400774574 1.0283843372981343 0.7781026951787925 0.7439276405433317 0.06443254043908667 0.21158788928015598 0.40159696749460005 0.01026305674337455 0.029933060521258003 1.1933950876426898e-07 6.923215754169199 -0.2502816421193418 SPPPESVDT(ph)PTSTK ddPTM_A549_PD325901_60min_R1 1 SPPPESVDTPTSTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SPPPES(0.131)VDT(0.775)PT(0.082)S(0.009)T(0.002)K 119.54 2.7318000000000003e-06 6134700.0 2743.5 2631.2 3253.5 3342.5 3661.1 2900.6 3424.8 3221.4 2922.9 2918.8 3279.3 True False 3022.0181003420475 2852.940458197202 3474.3020748848453 3548.958633631724 3403.9569661093387 2876.9784752908654 3555.1326381224694 3157.1466498605882 2800.060677658549 2734.5064698744773 2875.9668891954443 1.0507833423588062 0.9919934992698459 1.2080466183172178 1.2340053868368943 1.1835869803986514 1.0003517377405218 1.2361521446851644 1.0977687753365633 0.9736067157719851 0.9508129179607694 1.0 11.489831350888355 -8.678557886993998 4.863088731566405 0.9875565140997197 1.1304481117743768 0.39732596969080014 0.08265431618185899 0.16157057444884743 6.799662870647208 0.014142930951629176 0.015957655192595663 2.0962453536939535e-09 8.678557886993998 0.1428915976746571 SPPPS(ph)PPTHR ddPTM_A549_MK2206_60min_R1 2 SPPPSPPTHR 10 0 Q96HA1 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.01)PPPS(0.984)PPT(0.007)HR;SPPPS(0.999)PPT(0.001)HR 71.268 0.00083269 32190000.0 1923.98 2168.6 2080.2 2206.6 2304.93 2126.2 1919.6999999999998 1904.08 3218.8 3942.4 3606.8 True False 2248.7007872051886 2278.972477160488 2375.203639732975 2747.2170990580394 1965.8778503223077 2351.193072742665 2268.48464100071 2173.9891710004404 2489.7469393673814 3051.8091018842856 2711.1320173840754 0.8294324189254794 0.8405981201016648 0.8760929473382 1.0133099684716873 0.7251132876292573 0.8672366589552105 0.8367296857751441 0.8018750680751007 0.9183421992742704 1.1256586113533946 1.0 11.40467965095023 -9.409197502188787 1.1129506780568437 0.9815179480757488 0.8518721289135331 0.4530667796396788 0.07980045307828712 0.3025009404512202 0.782439610532106 0.017079287081913683 0.013341411535213477 3.8976469479285033e-10 9.409197502188787 -0.12964581916221563 SPPPS(ph)PPTHR ddPTM_A549_PD325901_60min_R1 2 SPPPSPPTHR 10 0 Q96HA1 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.005)PPPS(0.995)PPTHR;SPPPS(0.999)PPT(0.001)HR 77.279 0.0004345 49986000.0 4528.9 4335.9 4497.0 4707.7 4917.1 4875.4 4456.700000000001 4924.3 5154.4 4595.3 5742.4 True False 4988.670594000036 4701.301509842374 4802.193462657801 4998.4839370375685 4571.7398590741095 4835.696358833717 4626.302157299817 4826.080973461382 4937.778492908831 4305.151973761197 5036.121204072793 0.9905779451784473 0.9335163550155137 0.9535500175758655 0.9925265366916136 0.9077898791190468 0.9602025374057738 0.9186240699605186 0.9582932534583266 0.9804725289207832 0.8548547184050198 1.0 12.29809728940499 -8.901535733150233 2.0574649704084393 0.9926071384536019 0.9500696604898232 0.0 0.048334297109084295 0.228634580159307 1.906387322332892 0.004493005039846342 0.0046300908068585495 1.2544815166047916e-09 8.901535733150233 -0.042537477963778714 SPPREGS(ph)QGELTPANSQSR ddPTM_A549_MK2206_60min_R1 2 SPPREGSQGELTPANSQSR 19 1 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 S(0.02)PPREGS(0.98)QGELTPANSQSR;S(0.056)PPREGS(0.944)QGELTPANSQSR 110.94 1.4679e-10 120151000.0 3069.8 3764.4 2435.5 2793.3999999999996 4035.2 2710.5 2967.8 2800.6000000000004 4437.9 4520.0 5034.5 True False 3587.9071905957885 3955.9918809475867 2780.890522339035 3477.783125400489 3441.627425397118 2997.323310915716 3507.0108441745647 3197.5936264777934 3432.722735870046 3498.9288607236635 3784.2947048686174 0.9481045929059991 1.0453709844156893 0.7348504118247793 0.9190043050627661 0.9094501601498829 0.7920427833116598 0.9267277307083621 0.844964220773817 0.9070970956500131 0.9245920663161298 1.0 11.885808728703259 -10.20795371941547 0.7942129329553116 0.9961834648450408 0.8899332590120722 0.07867434866667666 0.08029545571442392 0.7013362889522133 0.856576451938113 0.03990566725686085 0.015031286785198791 6.19507089322399e-11 10.20795371941547 -0.10625020583296862 SPPREGS(ph)QGELTPANSQSR ddPTM_A549_PD325901_60min_R1 2 SPPREGSQGELTPANSQSR 19 1 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 S(0.013)PPREGS(0.987)QGELTPANSQSR;S(0.087)PPREGS(0.913)QGELTPANSQSR 114.74 1.9144e-14 129134000.0 5776.4 5870.0 5224.1 6114.7 7053.0 6437.6 6300.0 6492.3 7579.6 7188.5 7692.3 True False 6362.815875639072 6364.685500766788 5578.638841065293 6492.391131508721 6557.621611529097 6385.174319979478 6539.74994749228 6362.805983389176 7261.055770769013 6734.616883202918 6746.1958655073095 0.9431709369974826 0.9434480746858909 0.8269310515557915 0.9623780958841902 0.9720473200396722 0.9464851669407196 0.9693981731140406 0.9431694706525834 1.0763185527853016 0.9982836279089384 1.0 12.719858490076232 -8.741334224065756 21.663761667895827 1.0360392858675038 0.9380589523665752 0.44888097042365316 0.042187051861017955 31.50386904886007 33945.69207528548 0.0077766516744133835 0.008807870001192838 1.8141190168905322e-09 8.741334224065756 -0.0979803335009286 SPPREGSQGELT(ph)PANSQSR ddPTM_A549_MK2206_60min_R1 1 SPPREGSQGELTPANSQSR 19 1 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 SPPREGSQGELT(0.995)PANS(0.002)QS(0.003)R 60.036 0.0011797 4036500.0 628.88 1079.5 780.33 783.95 1070.4 605.1 603.03 462.39 1073.2 1256.1 1232.4 True False 735.0195693601796 1134.4419390827006 890.9925277342714 976.0177851928531 912.9455779503062 669.1312803671276 712.5927452532469 527.935198509986 830.1219135482391 972.3461376006622 926.3610674903339 0.7934482516104329 1.224621779665344 0.9618199199024181 1.0536040637340767 0.9855180771182748 0.7223223253325136 0.7692386589429747 0.5699021872111381 0.8961105368959184 1.0496405470006522 1.0 9.855430811712734 -7.019101205840269 23.567672425438484 0.8872272048470589 1.0203779069658847 0.18033293779752346 0.15918269579691807 594.8691501618318 733970.0871906453 0.024384418424140606 0.042713747954655906 9.569710375061986e-08 7.019101205840269 0.13315070211882585 SPPREGSQGELT(ph)PANSQSR ddPTM_A549_PD325901_60min_R1 2 SPPREGSQGELTPANSQSR 19 1 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 S(0.002)PPREGS(0.224)QGELT(0.773)PANS(0.001)QS(0.001)R;S(0.001)PPREGS(0.004)QGELT(0.995)PANS(0.001)QS(0.001)R 68.55199999999999 0.00056044 20927800.0 2595.1 2588.1 2724.2 2934.2 3132.2 3113.0 2672.3 3037.9 3130.2 3266.0 3501.7 True False 2858.552641588353 2806.2082699377393 2909.0805939453808 3115.438869948305 2912.205077503391 3087.648760111859 2773.995838838669 2977.3067013135546 2998.648579563719 3059.7842026209537 3071.0130991052 0.9308174694602404 0.9137728102675248 0.9472706563163141 1.0144661612990349 0.9482880676581675 1.0054169944802598 0.9032836231297506 0.969486812733248 0.9764362712869685 0.9963435856110421 1.0 11.58449895066321 -6.808036472630896 0.007908498293726286 1.9109589109720375 1.9667295070156825e-08 0.26715002754190564 0.031215670651876904 4064.6309310124343 8.429638140888088 985.1224762943975 1052.0804061054876 1.5558349650191006e-07 6.808036472630896 -1.9109588913047424 SPPS(ph)PELQGPPSTEK ddPTM_A549_PD325901_60min_R1 1 SPPSPELQGPPSTEK 15 0 A0A087WSV0;Q9HB09-3;Q9HB09;I6LJZ7 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 S(0.239)PPS(0.761)PELQGPPSTEK 93.75399999999999 2.3786e-05 5795400.0 2686.2 2928.4 2644.3 2826.1 3063.4 2670.7 2869.5 2963.1 2967.6 3079.6 3847.4 True False 2958.9010465240767 3175.1865452206935 2823.7580994676528 3000.661778461216 2848.2373521562768 2648.9507046677622 2978.700392750649 2903.998645993019 2842.8820921069873 2885.1535304321774 3374.1941906780567 0.8769207933256131 0.941020689915487 0.8368688759138099 0.8892972985227687 0.8441237199759132 0.7850617228806994 0.8827886672853491 0.8606495304911452 0.8425365973188698 0.8550644590649347 1.0 11.720327290257417 -10.736887569480016 0.8677926614293653 1.0047751891770322 0.8613283692111665 0.0 0.05598117809145622 0.322209834969911 0.4077952607791028 0.030665885453483654 0.006919604216312964 1.832788834872262e-11 10.736887569480016 -0.14344681996586572 SPPS(ph)PGR ddPTM_A549_MK2206_60min_R1 3 SPPSPGR 7 0 Q03252 Q03252 LMNB2 Lamin-B2 1 S(0.002)PPS(0.998)PGR;S(0.001)PPS(0.999)PGR;S(0.005)PPS(0.995)PGR 78.516 0.016738 297643300.0 9270.25 10506.619999999999 8613.880000000001 7495.13 10675.419999999998 7566.23 7883.17 7960.55 12615.3 14361.7 14084.2 True False 10834.84156414771 11041.362080597575 9835.45770994283 9331.437186469175 9105.079859643358 8366.883436543007 9315.439947594718 9088.982340661925 9757.954692494508 11117.381995366168 10586.704435854723 1.0234385619997668 1.0429460978624312 0.9290386606650136 0.8814298390031323 0.8600485556965731 0.7903199231865117 0.8799187701930616 0.8585280146179997 0.9217178727920815 1.0501267946722082 1.0 13.369965938285528 -5.766836415171754 21.511396193646192 0.9243169277722626 1.0331924139259994 0.3090807660417303 0.0687549500396375 22.243258002423406 88671.27955642558 0.010353459182421233 0.033803261489142894 1.7106595444393598e-06 5.766836415171754 0.10887548615373677 SPPS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 SPPSPGR 7 0 Q03252 Q03252 LMNB2 Lamin-B2 1 S(0.001)PPS(0.999)PGR;S(0.016)PPS(0.984)PGR 83.429 0.014513999999999999 338580000.0 5163.1 5756.299999999999 5182.0 5422.6 6164.4 5635.799999999999 5447.799999999999 5362.700000000001 5006.5 5649.0 5928.8 True False 5687.254111126671 6241.40360273661 5533.681681897425 5757.5416863818655 5731.433810025509 5589.903913343532 5655.119010150546 5255.736741543235 4796.0942155727325 5292.321175935631 5199.595185759749 1.0937878638518792 1.2003633705620171 1.064252405081966 1.1073057576001641 1.102284621257116 1.075065214432987 1.087607555610935 1.0107972935926324 0.9223976183199619 1.0178333094910605 1.0 12.344183591332959 -8.315491755176698 2.4336234917704904 0.9633166504224508 1.1080046619489068 0.6561201376181997 0.04053816178137531 0.1163334845411029 1.353128271996857 0.0071365918572899876 0.008958042062790982 4.836244455383136e-09 8.315491755176698 0.14468801152645594 SPPS(ph)PGRR ddPTM_A549_MK2206_60min_R1 1 SPPSPGRR 8 1 Q03252 Q03252 LMNB2 Lamin-B2 1 SPPS(1)PGRR 88.49600000000001 0.0011225999999999999 28164000.0 803.14 924.14 642.73 678.19 890.69 902.68 885.45 701.04 924.91 809.31 1193.8 True False 938.6903971122226 971.1747786789138 733.8787786585783 844.3465804451058 759.6706808899083 998.2009984495113 1046.3248035495537 800.4145668449586 715.4193617777694 626.4863089097944 897.3465127961382 1.0460734885872087 1.0822739764739555 0.8178320951755936 0.9409370498516963 0.8465745061211293 1.1123919068221593 1.1660209168130582 0.8919793585098593 0.7972609817678095 0.6981542803990607 1.0 9.809521383123187 SPPS(ph)PGRR ddPTM_A549_PD325901_60min_R1 2 SPPSPGRR 8 1 Q03252 Q03252 LMNB2 Lamin-B2 1 SPPS(1)PGRR;SPPS(1)PGRR 68.847 0.0030724 78213000.0 6374.0 6446.799999999999 6748.9 6515.6 7519.9 6643.0 7457.9 6716.099999999999 7874.099999999999 7255.3 7432.5 True False 7021.083787709203 6990.094461046563 7206.92093843256 6918.053813998766 6991.728166246653 6588.901610479633 7741.714465619471 6582.142116821473 7543.178959920352 6797.199119802757 6518.34961849942 1.0771259902633938 1.0723718226479149 1.105635837325899 1.0613198461102737 1.0726224543715421 1.0108235973995598 1.187680151989405 1.0097866027530966 1.1572222113573676 1.0427791569375087 1.0 12.670291019271282 -11.129367143932619 1.4999064700887481 1.0001447621355202 1.0922882043938211 0.1451743529763453 0.052572109643991664 0.40153808677330555 1.62160509002422 0.03640246489385661 0.007889537629833888 7.423912697003004e-12 11.129367143932619 0.09214344225830096 SPPS(ph)PVER ddPTM_A549_MK2206_60min_R1 4 SPPSPVER 8 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(0.005)PPS(0.995)PVER;S(0.013)PPS(0.987)PVER;SPPS(1)PVER;S(0.001)PPS(0.999)PVER 110.53 0.0015869999999999999 2515540000.0 22093.2 24746.6 23961.6 21533.000000000004 30072.5 23490.6 21671.6 21582.6 34000.2 32165.8 34493.9 True False 25821.992033119706 26006.09623872532 27359.715187878857 26808.585966653118 25648.87508679985 25976.3597002017 25609.049198265875 24641.999643940428 26299.208987162543 24899.52343988168 25928.112646790672 0.9959071215434533 1.0030076848630285 1.0552142981091754 1.0339582495593418 0.9892303167687222 1.0018608008252772 0.9876943049086803 0.9503969679409181 1.014312508797967 0.9603291909086831 1.0 14.662229573237203 -6.762095056919589 24.999999619547033 0.9997139307434991 1.0230345749288328 0.2272491889222623 0.024766812243985862 23.453290096997662 894323.6515734148 0.0033554314588598623 0.006630669029973383 1.729437784244269e-07 6.762095056919589 0.02332064418533364 SPPS(ph)PVER ddPTM_A549_PD325901_60min_R1 7 SPPSPVER 8 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 SPPS(1)PVER;S(0.001)PPS(0.999)PVER;S(0.086)PPS(0.914)PVER;S(0.007)PPS(0.993)PVER;S(0.05)PPS(0.95)PVER;S(0.102)PPS(0.898)PVER;S(0.007)PPS(0.993)PVER 119.53 0.0012203 3260192200.0 41847.799999999996 43070.49999999999 40032.6 43262.799999999996 48270.399999999994 44821.5 44740.100000000006 46522.4 48975.7 49249.50000000001 53202.299999999996 True False 46096.1578492779 46700.2021909329 42749.45297157987 45935.04489905235 44880.0536278398 44456.48856452099 46442.708988222155 45594.47423588324 46917.4216465845 46139.878165027774 46658.754377166675 0.9879423157476297 1.0008883180513388 0.9162150499349829 0.984489309931761 0.9618785204819502 0.9528005871128997 0.9953696708832364 0.9771901295803931 1.0055438100067329 0.9888793385278879 1.0 15.50986017255798 -8.314535437884446 1.40674375539633 1.0025311110333217 0.9678866557466005 0.21127142998669934 0.02244298736822973 0.33747332981792105 1.2966079171642773 0.0038778896458444992 0.004940988245916254 4.846905608694861e-09 8.314535437884446 -0.03464445528672122 SPPTTMLLPAS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 SPPTTMLLPASPAK 14 0 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 S(0.002)PPTT(0.001)MLLPAS(0.997)PAK;SPPT(0.003)T(0.003)MLLPAS(0.994)PAK 75.669 0.00029825 5109300.0 3509.1 3798.2 3747.8 4352.8 5105.1 4523.0 4232.299999999999 4622.4 5322.9 4357.1 4628.1 True False 3865.3412487371143 4118.2876437840605 4002.148245352213 4621.662570073946 4746.5353876389 4486.166187595868 4393.3624925034255 4530.20260579735 5099.197023883367 4081.991962412664 4058.873039943109 0.9523188359671612 1.0146382020960638 0.9860244964470013 1.138656598664817 1.1694219900274165 1.1052738391784602 1.0824094395830142 1.1161232591450674 1.2563085796728544 1.0056958969255858 1.0 11.986863498432825 -6.257767111989727 23.857097968916932 1.1236149712793868 0.9873582622959256 0.3782925072654926 0.06953210691498651 160.43566787337102 1042264.523036996 0.01268257200796067 0.03217835715891097 5.523735671408657e-07 6.257767111989727 -0.1362567089834612 SPPVLGSAAAS(ph)PVHLK ddPTM_A549_MK2206_60min_R1 2 SPPVLGSAAASPVHLK 16 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 SPPVLGS(0.002)AAAS(0.998)PVHLK;SPPVLGS(0.001)AAAS(0.999)PVHLK 106.16 2.5414e-07 3507700.0 1464.88 1752.5500000000002 1541.9699999999998 1643.73 2152.8999999999996 1511.8 1470.79 1928.36 2679.1000000000004 2330.1000000000004 2452.2 True False 1712.115931122537 1841.747309253718 1760.6445324291203 2046.4439237898443 1836.2112619293857 1671.777672548378 1738.0135047858696 2201.710935354821 2072.2881276435783 1803.728791675269 1843.2510627229772 0.9288566087103086 0.9991841841300567 0.9551843305752257 1.110236128531887 0.99618076943724 0.9069723090671724 0.9429065524141658 1.1944715399226744 1.1242571180630445 0.9785583896589088 1.0 10.848036873415198 -8.194164388998948 24.9999916584037 1.070502321914399 0.9802430751747964 0.2878956834418984 0.07337599556857072 205.97632357881054 76542.39003098382 0.012503760188548485 0.016142284777533388 6.3949272909514054e-09 8.194164388998948 -0.09025924673960262 SPPVLGSAAAS(ph)PVHLK ddPTM_A549_PD325901_60min_R1 2 SPPVLGSAAASPVHLK 16 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 SPPVLGS(0.002)AAAS(0.998)PVHLK;SPPVLGSAAAS(1)PVHLK 132.59 1.1138999999999999e-10 7811600.0 2724.4 2702.8 2750.2 2693.8 3138.0 2632.5 2094.2 3200.6 3303.1 2689.7 3079.7 True False 3000.979082402725 2930.5744414774267 2936.8451102960844 2860.1899079363175 2917.597705512307 2611.061792802592 2173.8959269902116 3136.7615221778715 3164.2821938396664 2519.871882972927 2700.9164238267963 1.1110966099983148 1.0850296646074074 1.0873513465237152 1.0589701638689932 1.0802250968500928 0.9667317987955757 0.8048734525113979 1.1613693391273276 1.1715587220415913 0.9329692176859896 1.0 11.399233282970236 -5.975806047275396 1.6588610130310693 1.0591085695901854 1.102547794190311 0.00513949245802825 0.10287265405201566 1.8324920133742577 9.192789524452483 0.015997035984023723 0.08159948832425136 1.0572895815523926e-06 5.975806047275396 0.043439224600125614 SPQDPGDPVQYNRT(ph)TDEELSELEDR ddPTM_A549_MK2206_60min_R1 1 SPQDPGDPVQYNRTTDEELSELEDR 25 1 Q9BV36;H7C3K9;Q9BV36-5;H7C052;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 SPQDPGDPVQY(0.007)NRT(0.495)T(0.495)DEELS(0.003)ELEDR 50.492 0.0032965000000000004 1595900.0 739.84 657.95 545.21 519.84 747.67 619.28 336.03 556.46 690.44 918.38 752.61 True False 864.7069046486384 691.4368446683307 622.5289762613285 647.2008233365045 637.6887334324597 684.8117985552054 397.08230135722704 635.3399090872787 534.0564424061188 710.9173201573896 565.7161660206916 1.5285172257513513 1.2222327842104492 1.1004263509743133 1.1440380569093238 1.1272238124606389 1.2105218830358788 0.7019108259718768 1.1230718640344468 0.944036028107044 1.2566678537013685 1.0 9.143934588093593 -2.000000000039584 0.42034223908888285 0.9752805965193792 10.659960971992268 0.42325522001886295 0.14932144208254863 30.523180914163106 0.34377165102801316 0.024422761671923428 251.4306466730777 0.009999999999088547 2.000000000039584 9.684680375472889 SPQDPGDPVQYNRT(ph)TDEELSELEDR ddPTM_A549_PD325901_60min_R1 2 SPQDPGDPVQYNRTTDEELSELEDR 25 1 Q9BV36;H7C3K9;Q9BV36-5;H7C052;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 SPQDPGDPVQYNRT(0.499)T(0.499)DEELS(0.001)ELEDR;SPQDPGDPVQY(0.001)NRT(0.5)T(0.5)DEELSELEDR 99.446 7.7112e-10 49000000.0 810.24 885.63 716.45 700.97 1103.69 835.4499999999999 925.61 872.96 725.77 847.0899999999999 1123.38 True False 892.4949683328373 960.2651482187557 765.0726053638388 744.2673248816249 1026.1706219237979 828.646372192565 960.8345950632267 855.5481279761282 695.2684108331606 793.6045928347156 985.2113816925494 0.905891857237348 0.974679308484097 0.7765568075852697 0.7554392272681693 1.041574063183154 0.8410848550784983 0.9752573030698809 0.8683904224759711 0.7057048099045713 0.8055170774330055 1.0 9.944289484498068 -5.728350700956699 24.992931310535152 0.865988953771471 0.9402855781445201 0.07839919564959197 0.10148342731271487 498.073405247678 376203.9233511704 0.016758902688226586 0.06489790011719751 1.8691721391372374e-06 5.728350700956699 0.07429662437304907 SPQDPGDPVQYNRTT(ph)DEELS(ph)ELEDR ddPTM_A549_PD325901_60min_R1 2 SPQDPGDPVQYNRTTDEELSELEDR 25 1 Q9BV36;H7C3K9;Q9BV36-5;H7C052;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 2 S(0.005)PQDPGDPVQY(0.019)NRT(0.468)T(0.513)DEELS(0.995)ELEDR;S(0.012)PQDPGDPVQY(0.03)NRT(0.477)T(0.503)DEELS(0.978)ELEDR 55.846000000000004 0.002034 8705800.0 1152.37 1152.88 1313.62 1345.65 1133.75 1365.3600000000001 1160.02 1062.44 1356.3000000000002 1110.6399999999999 1641.74 True False 1269.3577540700426 1250.0372436327123 1402.770152638769 1428.7677443071148 1054.1193112251676 1354.2409608436658 1204.1651958873013 1041.248800731944 1299.2994276603004 1040.5140008569913 1439.816387847323 0.8816108531504256 0.8681921210117974 0.9742701670009869 0.9923263524200282 0.7321206510235564 0.94056504167757 0.836332469925318 0.7231816567171598 0.902406333631811 0.7226713139532112 1.0 10.491669128807585 -9.974170600365348 1.0992982987632653 0.9859805832105466 0.8734527323457592 0.0 0.1141429996815097 0.46958409454518485 1.1458147437353579 0.02761598018768004 0.01565121738631978 1.0612785818810714e-10 9.974170600365348 -0.11252785086478745 SPQDPGDPVQYNRTT(ph)DEELSELEDR ddPTM_A549_PD325901_60min_R1 2 SPQDPGDPVQYNRTTDEELSELEDR 25 1 Q9BV36;H7C3K9;Q9BV36-5;H7C052;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 S(0.001)PQDPGDPVQY(0.039)NRT(0.262)T(0.691)DEELS(0.006)ELEDR;SPQDPGDPVQY(0.001)NRT(0.188)T(0.81)DEELS(0.001)ELEDR 85.19 3.6102e-07 8860200.0 2791.6 2813.3 2571.9 3085.7 3494.5 2526.6 2556.7 3260.0 3239.8 2804.8 3335.0 True False 3075.001176932698 3050.3866642772095 2746.4446000910834 3276.296680866841 3249.05837537054 2506.0242072915607 2653.9966175799227 3194.9767425794757 3103.642472707985 2627.7044493298363 2924.8161423068345 1.0513485386152892 1.0429327916220184 0.9390144427761987 1.1201718403683283 1.1108590137935892 0.8568142698074116 0.9074063081061521 1.092368404415179 1.0611410501379783 0.8984169675900848 1.0 11.514130222548221 -4.043339310575731 11.681648705247975 1.022541358720003 1.0557329585741035 0.0 0.0897250378933835 0.0 0.0 0.010557041208502118 0.0 9.050252361048042e-05 4.043339310575731 0.033191599854100584 SPQDRS(ph)PILAEVK ddPTM_A549_MK2206_60min_R1 2 SPQDRSPILAEVK 13 1 A0A1W2PRD8;A0A0S1TJ81;A0A1W2PPA2;A0A1X7SBS6;A0A1W2PNI2;O95259-2;O95259 A0A1W2PRD8 KCNH1 Potassium voltage-gated channel subfamily H member 1 1 S(0.111)PQDRS(0.889)PILAEVK;S(0.136)PQDRS(0.864)PILAEVK 52.823 0.0064862999999999995 2283100.0 1564.8400000000001 1489.02 1396.7 1198.33 1574.96 1187.67 1337.06 1329.79 1665.25 1611.88 1878.8600000000001 True False 1828.9467353351747 1564.8047578813557 1594.7730620205014 1491.9209037950777 1343.2854703368969 1313.3484510884593 1579.9864948150278 1518.291804811077 1288.0735338578147 1247.7551885007215 1412.2872081019875 1.2950246414772444 1.1079932954886287 1.1292129907228727 1.0563863322107918 0.9511418517641153 0.9299443084622322 1.1187430472718194 1.075058809639402 0.9120478656667103 0.8834996035810696 1.0 10.463817795062477 -2.0000000000000178 0.433513274902097 0.9696951997688408 7.431719714664356 0.6471041938343742 0.06884949101325075 32.16483241818385 0.3539005113332044 0.01450326017205717 183.8883226275942 0.00999999999999959 2.0000000000000178 6.462024514895516 SPQEEDFRCPS(ph)DEDFR ddPTM_A549_MK2206_60min_R1 4 SPQEEDFRCPSDEDFR 16 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 SPQEEDFRCPS(1)DEDFR;SPQEEDFRCPS(1)DEDFR;SPQEEDFRCPS(1)DEDFR;SPQEEDFRCPS(1)DEDFR 99.40700000000001 5.835e-07 28085100.0 2635.96 3235.82 2478.32 2741.84 3727.05 3867.06 2898.1099999999997 3681.0899999999997 3510.29 3696.12 4663.37 True False 3080.8456049654287 3400.509416695309 2829.7830422185475 3413.5909230858747 3178.8058821932814 4276.269722453324 3424.6590732565355 4202.8957803653275 2715.214919781261 2861.1639249331747 3505.3265265355367 0.8789040283817324 0.9700977614933286 0.8072808683576027 0.9738296553102207 0.9068501488034071 1.2199347735743589 0.9769871786070874 1.199002645987228 0.7745968597295908 0.8162332105936461 1.0 11.77533312441069 -3.563328115375581 15.067729177205546 0.9381712742920905 0.548747469915202 0.0 0.14087239830422224 0.0 0.0 0.01911605325648122 0.0 0.0002733202974109466 3.563328115375581 -0.3894238043768885 SPQEEDFRCPS(ph)DEDFR ddPTM_A549_PD325901_60min_R1 4 SPQEEDFRCPSDEDFR 16 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.018)PQEEDFRCPS(0.982)DEDFR;SPQEEDFRCPS(1)DEDFR;SPQEEDFRCPS(1)DEDFR;SPQEEDFRCPS(1)DEDFR 142.98 8.001699999999999e-15 29354400.0 7533.4 7783.43 7696.68 6732.99 7807.34 6091.21 6536.22 7158.02 6093.9 6609.889999999999 7939.08 True False 8298.185222204034 8439.366962049957 8219.022988696697 7148.8715005702525 7258.979372260822 6041.605205294237 6784.9594288568205 7015.247675741942 5837.7945751080915 6192.540417349115 6962.623489974617 1.1918187496641854 1.2120958391907422 1.1804491511757245 1.0267496886574166 1.0425638242126583 0.8677196482035053 0.974483172704425 1.0075580972952363 0.8384475454566586 0.8893975706521638 1.0 12.765415295164171 -6.496045273596509 1.2352605601109723 0.9298999619875529 1.215127340089666 0.7960356096616044 0.055903256716494765 0.18661595114486962 0.5373063521380445 0.010463009628745816 0.03779947001633406 3.191205166402248e-07 6.496045273596509 0.2852273781021132 SPQEEDFRCPS(ph)DEDFRQLPEEDLR ddPTM_A549_MK2206_60min_R1 2 SPQEEDFRCPSDEDFRQLPEEDLR 24 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.001)PQEEDFRCPS(0.999)DEDFRQLPEEDLR;SPQEEDFRCPS(1)DEDFRQLPEEDLR 104.91 1.8518e-11 9578300.0 872.88 1037.01 1215.57 1070.21 1720.5300000000002 1329.3400000000001 1061.8400000000001 1191.45 1554.1799999999998 1972.6100000000001 1318.66 True False 1020.200804132925 1089.789379572165 1387.956104389103 1332.411498043552 1467.4423161723093 1470.0098764555241 1254.762583320412 1360.3416861625954 1202.1607115154707 1526.9960309628566 991.2003288354458 1.0292579355089113 1.0994643039036829 1.4002780911299766 1.344240371276907 1.4804699650336042 1.4830603195850713 1.2659021055759976 1.3724185178195523 1.2128332452511197 1.5405523853658456 1.0 9.953032855874293 -9.75284202767945 0.8209103300489864 1.025761940045316 1.3152802188326493 0.0 0.2058520145252165 0.4137644566717807 0.5840359328427372 0.0551461687534136 0.03089863445640887 1.766680324448404e-10 9.75284202767945 0.2895182787873334 SPQEEDFRCPS(ph)DEDFRQLPEEDLR ddPTM_A549_PD325901_60min_R1 1 SPQEEDFRCPSDEDFRQLPEEDLR 24 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.021)PQEEDFRCPS(0.979)DEDFRQLPEEDLR 59.048 0.00024464 7169600.0 1342.6 1580.0 1109.8 1353.5 1885.5 1832.8 1672.3 2149.9 1408.5 1407.1 1942.5 True False 1478.8997636301192 1713.1521450104829 1185.1177017695418 1437.1026209784707 1753.0689846218781 1817.874284462904 1735.940291617672 2107.0185579360777 1349.3056431906896 1318.2554658628121 1703.5848145220477 0.8681104404215029 1.005615998925841 0.6956611092486373 0.8435756228442666 1.0290470833491865 1.0670876313093463 1.0189925836505545 1.2368145923672231 0.7920390177751416 0.7738126418041932 1.0 10.734358059771347 -4.953249497923593 10.802186992604494 0.9350340324932962 0.6541134254720051 0.017166366543922673 0.14945462025665446 106561.51093583449 1004311.2715636785 0.02064870200108137 544117.3220001904 1.1136545661478302e-05 4.953249497923593 -0.28092060702129107 SPQGPSPVLAEDS(ph)EGEG ddPTM_A549_MK2206_60min_R1 1 SPQGPSPVLAEDSEGEG 17 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 SPQGPSPVLAEDS(1)EGEG 54.768 0.012143000000000001 3105300.0 1358.6 1874.9 1565.6 1354.6 2242.7 1828.4 1743.8 1800.8 2140.8 2065.0 2451.6 True False 1587.8984654190635 1970.3244016546137 1787.625621750767 1686.4770608103051 1912.801800886725 2021.8800744063062 2060.6258878871904 2056.0689147187068 1655.9122181551174 1598.5150657952142 1842.8000592821334 0.8616770210207355 1.0692013991046634 0.9700594553090802 0.9151709390910676 1.0379866178384327 1.0971782121571745 1.1182037234630389 1.1157308707270461 0.8985848517935155 0.8674381454154713 1.0 10.847683834127766 -4.384996503198201 19.695151676062665 0.9860835774389209 0.9960547288513498 0.0 0.0948191905108891 0.0 0.0 0.012489367883842254 0.0 4.121008371895642e-05 4.384996503198201 0.00997115141242888 SPQLSLS(ph)PRPAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SPQLSLSPRPASPK 14 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 2 S(0.102)PQLS(0.128)LS(0.77)PRPAS(0.999)PK 65.78399999999999 0.0013154999999999998 4850300.0 1902.3 1902.4 1684.6 1161.8 2629.8 2048.0 2345.0 1983.9 2894.4 3099.3 2662.0 True False 2223.361733230298 1999.224034192617 1923.5016111403565 1446.4410521551831 2242.959903674994 2264.718000647625 2771.056145828342 2265.123900438937 2238.82302140703 2399.165977442667 2000.9519325375422 1.1111519957456963 0.9991364618425721 0.9612932624028776 0.7228764612655405 1.1209464191528806 1.1318202920424896 1.3848689220206196 1.1320231453867964 1.1188789620587374 1.1990122993110197 1.0 10.966470795472636 SPQLSLS(ph)PRPAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SPQLSLSPRPASPK 14 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 2 S(0.017)PQLS(0.024)LS(0.959)PRPAS(1)PK;S(0.062)PQLS(0.074)LS(0.866)PRPAS(0.999)PK 89.846 2.0695e-05 23587000.0 4016.0 3954.1000000000004 4058.2 4135.8 5467.1 4626.5 4281.3 5023.4 4631.6 4278.5 4523.0 True False 4423.701363577057 4287.325883915155 4333.6138559390465 4391.258972916702 5083.109756471107 4588.823317911184 4444.227214317251 4923.204346218934 4436.94995882286 4008.354779826624 3966.6996736593137 1.1152095513941835 1.0808294644499923 1.0924986039947036 1.1070308655017809 1.281445578102437 1.1568365884574154 1.1203840925565747 1.241133625242981 1.1185495055968622 1.0105011998876343 1.0 11.953723457107685 -10.106179671182643 0.866631594508861 1.0091563119287885 1.1468221123317082 0.44854493858277 0.05964686932733966 0.38465925792220756 0.5758203206795088 0.02783747596287264 0.012315880759485202 7.83105598543718e-11 10.106179671182643 0.13766580040291965 SPQNDDHS(ph)DTDSEENRDNQQFLTTVK ddPTM_A549_MK2206_60min_R1 2 SPQNDDHSDTDSEENRDNQQFLTTVK 26 1 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 SPQNDDHS(0.999)DTDSEENRDNQQFLTTVK;SPQNDDHS(0.999)DT(0.001)DSEENRDNQQFLTTVK 173.25 1.8557e-48 33831000.0 8244.8 8792.0 7939.1 7074.4 11746.5 7672.5 7386.3 7163.7 12820.400000000001 12530.2 11918.3 True False 9636.320673993145 9239.47524633174 9064.983759352013 8807.628317581879 10018.605410494463 8484.39885740669 8728.295100184165 8179.176412911148 9916.599869971911 9699.619117398159 8958.657181653716 1.0756434227360774 1.031345999627389 1.0118685842690847 0.9831415734513063 1.118315525122604 0.9470614496536097 0.9742860925696202 0.9129913386641411 1.1069292717529085 1.082709040062594 1.0 13.12906678674948 SPQNDDHS(ph)DTDSEENRDNQQFLTTVK ddPTM_A549_PD325901_60min_R1 2 SPQNDDHSDTDSEENRDNQQFLTTVK 26 1 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 S(0.001)PQNDDHS(0.993)DT(0.006)DSEENRDNQQFLTTVK;SPQNDDHS(0.974)DT(0.026)DSEENRDNQQFLTTVK 212.17 3.683599999999999e-81 56167000.0 8242.8 10114.0 10297.8 9531.8 11906.400000000001 9897.7 10826.8 12646.599999999999 9817.8 11519.7 13067.2 True False 9079.602987971353 10966.342275086083 10996.670633701911 10120.557637711554 11070.13553885014 9817.096412771978 11238.819798652292 12394.35364193422 9405.19200831917 10792.344176035702 11460.01723980566 0.7922852817737407 0.9569219701515955 0.9595684198018182 0.8831188841983958 0.9659789603456014 0.8566388869532326 0.9806983326006655 1.0815301044123389 0.8206961483138803 0.9417389127957996 1.0 13.484321593955212 -6.739781094618187 24.929481820468286 0.9297295662716002 0.9065838825173466 0.05175676119311079 0.07875392880355152 1234.3365753287603 1420759.8269584354 0.012858341220635552 0.026748129190980532 1.820618306877434e-07 6.739781094618187 -0.023145683754253632 SPQPDPVKT(ph)PTSSK ddPTM_A549_MK2206_60min_R1 1 SPQPDPVKTPTSSK 14 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SPQPDPVKT(0.996)PT(0.004)S(0.001)SK 108.49 5.9903e-06 13653000.0 3357.2 3574.5 3617.5 3167.6 4442.9 3364.4 3791.6 3725.8 5155.1 5493.9 5125.7 True False 3923.8132843404082 3756.4267820760665 4130.515895939829 3943.6621421989653 3789.355295474039 3720.4185748920245 4480.484640734645 4253.943559783959 3987.478081003104 4252.824174320738 3852.8472278766685 1.018419120267805 0.9749742359097534 1.072068434495438 1.0235708578490266 0.9835207760268189 0.9656283664645519 1.1629022319693356 1.104103876480028 1.0349432108681431 1.1038133418709415 1.0 11.911709266414974 SPQQT(ph)VPYVVPLSPK ddPTM_A549_MK2206_60min_R1 1 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 S(0.342)PQQT(0.656)VPY(0.002)VVPLSPK 67.02199999999999 0.0033312 1250600.0 1297.3 1815.4 1908.5 1574.7 2224.2 1667.7 1559.6 1667.9 2504.8 1961.8 2480.0 True False 1516.2525240601728 1907.7961057996615 2179.1539978994247 1960.5015706909687 1897.0231263799235 1844.1749070703347 1842.9591322106103 1904.3299327295256 1937.4667993436726 1518.6280174707267 1864.14755548201 0.813375807940331 1.0234147507203986 1.168981495853725 1.0516879765904823 1.017635712796036 0.9892859079996428 0.9886337198956758 1.021555363001898 1.0393312448073375 0.8146501134015957 1.0 10.864300344834984 -11.204501442048013 1.653140459225244 1.0000194599695094 1.0211029307753776 0.0 0.09681064020021349 2.5159702795966736 12.394448360957714 0.0565848879423655 0.011840202077700196 6.2445127682514995e-12 11.204501442048013 0.021083470805868254 SPQQTVPYVVPLS(ph)PK ddPTM_A549_MK2206_60min_R1 5 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 SPQQTVPY(0.001)VVPLS(0.999)PK;SPQQTVPYVVPLS(1)PK;SPQQTVPYVVPLS(1)PK;SPQQTVPYVVPLS(1)PK;SPQQTVPY(0.001)VVPLS(0.998)PK 123.97 2.7804e-07 27446800.0 9184.98 11041.94 11259.71 9783.59 13974.5 9670.16 9828.8 10768.3 15728.599999999999 14313.800000000001 14953.2 True False 10735.18007279905 11603.927582060998 12856.506188990363 12180.569989202044 11918.869561908215 10693.449912667305 11614.565733952062 12294.73950153567 12166.097213413008 11080.302638634163 11239.907752674822 0.9550950336086469 1.0323863716140862 1.1438266640516537 1.0836894979234475 1.0604063506723902 0.9513823554399302 1.0333328341763375 1.0938470112096625 1.0824018738514802 0.9858001402188841 1.0 13.45634257477869 SPQQTVPYVVPLS(ph)PK ddPTM_A549_PD325901_60min_R1 4 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 SPQQTVPYVVPLS(1)PK;SPQQTVPYVVPLS(1)PK;SPQQTVPYVVPLS(1)PK;SPQQTVPYVVPLS(1)PK 177.44 1.1119e-27 63107200.0 13581.550000000001 14960.37 14453.909999999998 14103.0 17154.01 16659.73 16859.04 16838.21 16099.32 16941.850000000002 17946.86 True False 14960.338957791324 16221.13288332309 15434.839251021625 14974.11027976311 15949.171515721844 16524.058682395877 17500.619992820673 16502.3586922298 15422.721567293396 15872.138699685796 15739.509994518994 0.9504958517133633 1.0305996113584102 0.980642933382077 0.9513708041087415 1.0133207146395193 1.0498458140151814 1.111891030846256 1.0484671186063896 0.9798730438663011 1.0084264824770903 1.0 13.942103006831859 SPQSDPADT(ph)PTNTK ddPTM_A549_MK2206_60min_R1 2 SPQSDPADTPTNTK 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SPQSDPADT(0.845)PT(0.154)NT(0.001)K;SPQSDPADT(0.971)PT(0.028)NTK 135.47 5.1695e-09 11141300.0 2659.1000000000004 3034.9 2861.5 2202.4700000000003 3578.3 3264.7 2655.92 2567.5 4529.5 4181.2 4195.1 True False 3107.891071246746 3189.3634468940163 3267.3037280530275 2742.075248872635 3051.936810145346 3610.168387067528 3138.4662852146735 2931.450987638979 3503.5754821251867 3236.6640160304823 3153.3408911300694 0.985586772425662 1.0114236160972236 1.0361403479222688 0.8695778044757957 0.9678423346901822 1.14487095170156 0.9952829058357642 0.929633391646543 1.1110677859093132 1.0264237606326643 1.0 11.622665425301417 SPQTLAPVGEDAMKTPS(ph)PAAEDAREPEAK ddPTM_A549_MK2206_60min_R1 2 SPQTLAPVGEDAMKTPSPAAEDAREPEAK 29 2 Q92797 Q92797 SYMPK Symplekin 1 SPQTLAPVGEDAMKT(0.229)PS(0.771)PAAEDAREPEAK;SPQTLAPVGEDAMKT(0.219)PS(0.781)PAAEDAREPEAK 154.54 3.0137999999999997e-46 44926000.0 12371.099999999999 14929.1 12982.1 12161.9 16382.6 11013.099999999999 10294.5 9203.6 19766.0 20968.1 20266.0 True False 14459.039235643884 15688.927422658231 14823.156990374699 15141.566045968444 13972.741241898997 12178.498932095872 12164.877395833635 10508.238484842897 15289.032559815976 16231.391647022088 15233.39288685418 0.9491673551019265 1.0299036819431842 0.9730699589036728 0.9939720033765439 0.917244198037912 0.799460699435215 0.7985665101785332 0.689816022135889 1.003652480663701 1.06551388568394 1.0 13.894949684203624 -4.168314826217372 16.51488840925268 0.9517849854897374 0.9252242788264317 0.0 0.1139340948939213 0.0 0.0 0.01599247339011839 0.0 6.787114467075893e-05 4.168314826217372 -0.02656070666330579 SPQTLAPVGEDAMKTPS(ph)PAAEDAREPEAK ddPTM_A549_PD325901_60min_R1 2 SPQTLAPVGEDAMKTPSPAAEDAREPEAK 29 2 Q92797 Q92797 SYMPK Symplekin 1 SPQTLAPVGEDAMKT(0.019)PS(0.981)PAAEDAREPEAK;SPQTLAPVGEDAMKT(0.023)PS(0.977)PAAEDAREPEAK 173.7 6.759e-58 75670000.0 7499.4 7988.1 9094.5 8359.3 10160.400000000001 10635.4 10198.4 9922.900000000001 10356.1 10661.6 10545.0 True False 8260.733567233512 8661.28522123939 9711.7074596712 8875.634975652258 9446.768555477132 10548.788828555636 10586.505692778615 9724.979975135542 9920.869131307847 9988.424756479964 9248.031850262545 0.8932423353406806 0.936554432497278 1.0501377608680587 0.9597323105456524 1.0214896216224585 1.140652303036366 1.1447306696373534 1.0515729327704961 1.0727546457386175 1.080059510845694 1.0 13.174930651157329 -5.384638722259846 0.9249004927095993 1.0497191714388816 0.8198096073147163 0.5302794325530921 0.05224333898738951 1.2876179833394696 0.9310114771168121 0.008978336598357823 0.28316274076742376 4.124404744170521e-06 5.384638722259846 -0.2299095641241653 SPQVLGSSLSVRS(ph)PTGS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 SPQVLGSSLSVRSPTGSPSR 20 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 2 S(0.053)PQVLGS(0.13)S(0.085)LS(0.115)VRS(0.645)PT(0.325)GS(0.479)PS(0.167)R 40.554 0.027382 42344000.0 4181.9 4870.1 4346.6 4625.4 5397.7 4793.0 4464.7 5386.7 4999.3 4861.1 5516.2 True False 4606.44340944793 5280.520418617435 4641.586414229129 4911.100452954426 5018.5841730541015 4753.967397114083 4634.606601677581 5279.258042715599 4789.196806534057 4554.169316399484 4837.742370072854 0.9521886568297269 1.0915257602975483 0.9594529967000349 1.015163701840631 1.0373814455478174 0.9826830437525945 0.9580102136790278 1.0912648171126351 0.9899652441520845 0.941383184142338 1.0 12.240118226506818 -7.284596578982765 24.426851021181132 0.9992609111856271 1.0129600178499298 0.022361910475507618 0.04973379136520333 2342.7058442177395 2471149.806110881 0.006426410590223813 0.010279647813075653 5.192821820056981e-08 7.284596578982765 0.01369910666430274 SPRPAS(ph)PASNVVVLPSGSTVYVK ddPTM_A549_MK2206_60min_R1 2 SPRPASPASNVVVLPSGSTVYVK 23 1 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;Q7Z589-2 E9PMC9 C11orf30;EMSY Protein EMSY 1 S(0.164)PRPAS(0.81)PAS(0.026)NVVVLPSGSTVYVK;S(0.158)PRPAS(0.746)PAS(0.096)NVVVLPSGSTVYVK 123.28 3.4041999999999997e-16 14398600.0 2387.05 2796.8999999999996 3268.3 2734.8 4018.7000000000003 3413.6 2919.8 2454.9 4540.6 4496.6 4252.7 True False 2789.9256822306593 2939.2502634742063 3731.794085058782 3404.826122769837 3427.5545535397005 3774.82488623571 3450.289865496626 2802.8895928159423 3512.1613498482448 3480.8149369756693 3196.6372214509424 0.8727689409073207 0.9194819617786002 1.1674124483118338 1.0651274720577766 1.072237578458761 1.1808737197029602 1.079349837492836 0.8768244247446135 1.0987050160962861 1.0888989571971948 1.0 11.642339310134592 -5.600466669187098 7.64010794218921 1.056180939004063 0.8842673610894581 0.42009928704156474 0.07814059223084316 0.1561932712777052 12.910754656244576 0.010849251876662969 0.042573293924598965 2.5091887448671147e-06 5.600466669187098 -0.17191357791460493 SPRPAS(ph)PASNVVVLPSGSTVYVK ddPTM_A549_PD325901_60min_R1 4 SPRPASPASNVVVLPSGSTVYVK 23 1 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;Q7Z589-2 E9PMC9 C11orf30;EMSY Protein EMSY 1 S(0.172)PRPAS(0.788)PAS(0.039)NVVVLPS(0.001)GSTVYVK;S(0.13)PRPAS(0.849)PAS(0.02)NVVVLPSGSTVYVK;S(0.147)PRPAS(0.7)PAS(0.153)NVVVLPSGSTVYVK;S(0.072)PRPAS(0.828)PAS(0.1)NVVVLPSGSTVYVK 124.5 2.3238e-16 35564000.0 7069.099999999999 8536.8 8871.8 9340.9 10638.599999999999 9245.2 9604.9 9540.5 10646.6 10677.8 10264.5 True False 7786.749828003625 9256.226095902204 9473.89369846731 9917.866178276916 9891.381437177573 9169.91015643629 9970.419725502952 9350.207243122537 10199.16042654881 10003.601885715256 9002.031572026544 0.8649991688765724 1.028237461937543 1.052417292992735 1.1017364357059456 1.0987943508123932 1.0186489664101404 1.1075744009258572 1.0386774550067048 1.1329842985934748 1.1112604755576565 1.0 13.136034909230725 -5.201959912261966 2.158977528917254 1.066965755993945 0.7903790472581707 0.686150702384712 0.040442290675575594 0.4422149569496423 2.007980927256444 0.0069338663834321865 0.2481094452106966 6.281163346846454e-06 5.201959912261966 -0.2765867087357743 SPRPT(ph)SAPAITQGQVAEGGVLDASAK ddPTM_A549_MK2206_60min_R1 1 SPRPTSAPAITQGQVAEGGVLDASAK 26 1 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0;A0A2R8Y5C8;A0A1B0GWG0;A0A2R8Y6D0 P11171;A0A1B0GWG0 EPB41 Protein 4.1 1 S(0.239)PRPT(0.436)S(0.324)APAIT(0.002)QGQVAEGGVLDASAK 137.04 1.2493000000000002e-24 16562000.0 3690.6 3835.4 4121.2 3489.3 5152.9 4097.7 3609.1 3696.6 5269.0 5131.7 5590.9 True False 4313.483053493004 4030.6054776820674 4705.648130019968 4344.178656640627 4394.915236005356 4531.315894166882 4264.826753052908 4220.604370362709 4075.579912864029 3972.4454058795636 4202.525229009821 1.0264026551743812 0.9590913220125367 1.1197191863447042 1.0337067405694509 1.0457796197551597 1.0782364524280392 1.0148247828741213 1.0043019709264538 0.9697930864829807 0.9452520066882579 1.0 12.037040765077272 -8.1838813996644 2.5995370588606157 0.986162086349595 1.042961243082382 0.35926462307772566 0.039416056754042805 0.2521106636608074 3.3432282225011276 0.006149823225076311 0.008041257926474867 6.548149713474654e-09 8.1838813996644 0.056799156732787015 SPRPT(ph)SAPAITQGQVAEGGVLDASAK ddPTM_A549_PD325901_60min_R1 2 SPRPTSAPAITQGQVAEGGVLDASAK 26 1 P11171;A0A2U3TZH6;A0A2R8Y570;P11171-7;P11171-5;A0A3B3IU06;P11171-2;A0A2R8Y5Z6;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8Y5G2;A0A2R8YCW8;A0A2R8YD30;Q4VB86;A0A2R8Y7Y3;A0A2R8Y7N0;A0A3B3IUD6;A0A2R8Y420;A0A2R8Y4N6;P11171-3;P11171-4;P11171-6;A0A3B3ITP0;A0A2R8Y5C8;A0A1B0GWG0;A0A2R8Y6D0 P11171;A0A1B0GWG0 EPB41 Protein 4.1 1 S(0.022)PRPT(0.566)S(0.406)APAIT(0.006)QGQVAEGGVLDASAK;S(0.103)PRPT(0.448)S(0.448)APAIT(0.002)QGQVAEGGVLDASAK 183.48 1.6139999999999998e-57 45409000.0 11126.1 9703.7 11031.9 11450.099999999999 12348.0 12531.400000000001 10342.099999999999 10855.7 12904.6 12518.900000000001 14129.3 True False 12255.61348139809 10521.46485413811 11780.59107420382 12157.34667193616 11480.719078287433 12429.348433172423 10735.674274914267 10639.174547368102 12362.264538955325 11728.45451751116 12391.485673012286 0.9890350362176413 0.8490882475095832 0.95070045554433 0.9811048483406584 0.9265006135052527 1.0030555464582103 0.8663750706096323 0.8585874872566261 0.997641837724059 0.9464930055203019 1.0 13.597061548835274 -8.929589870967694 24.435514204473147 0.9989596957448922 0.9283245366133099 0.14836174867797747 0.052478113243319 34.24257290375833 11883.124081841586 0.008426016219313827 0.008970139925781606 1.1760076017228363e-09 8.929589870967694 -0.07063515913158225 SPRS(ph)PLEATR ddPTM_A549_MK2206_60min_R1 2 SPRSPLEATR 10 1 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(0.085)PRS(0.915)PLEATR;S(0.241)PRS(0.759)PLEATR 84.734 0.00024652 15826100.0 1315.82 1704.7 1325.68 1236.97 2212.1 1102.69 1320.71 1200.4 2132.31 2254.2 2187.1000000000004 True False 1537.8982472896453 1791.4619486375914 1513.6813581007648 1540.0277055296933 1886.7030203511504 1219.3759238936184 1560.6659114528563 1370.5603760708218 1649.345189599373 1744.9746543901076 1643.982709110768 0.9354710598638206 1.089708510137917 0.9207404370569789 0.9367663643875525 1.1476416448270736 0.7417206501844416 0.9493201496608332 0.8336829630113077 1.0032618837527225 1.0614312697570685 1.0 10.682979409952162 SPRS(ph)PQLSDFGLER ddPTM_A549_MK2206_60min_R1 3 SPRSPQLSDFGLER 14 1 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 S(0.205)PRS(0.795)PQLSDFGLER;S(0.117)PRS(0.883)PQLSDFGLER;S(0.06)PRS(0.927)PQLS(0.013)DFGLER 192.02 3.0668000000000006e-27 97392600.0 7493.0 8220.5 7743.799999999999 6954.700000000001 8314.0 7054.4 5724.83 7077.12 9624.5 10636.4 11820.5 True False 8757.635213738442 8638.888337405597 8841.987282647922 8658.601812208353 7091.021613489201 7800.89192566826 6764.957507600195 8080.323432771017 7444.566117168313 8233.629852699374 8885.143620796403 0.9856492576260087 0.9722846029394026 0.9951428654402985 0.9745033036879888 0.7980761950647692 0.8779702679661403 0.7613785208565745 0.9094195634450254 0.8378667171731135 0.9266738056352732 1.0 13.11717938104391 -6.5604026005353315 24.997060352091722 0.8971015039694022 0.9834302300289874 0.37310368939763816 0.06323275555325758 200.90164800687893 133832.9607102033 0.011523573090329298 0.02398827450510756 2.7516766558465284e-07 6.5604026005353315 0.08632872605958519 SPRS(ph)PQLSDFGLER ddPTM_A549_PD325901_60min_R1 2 SPRSPQLSDFGLER 14 1 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 S(0.391)PRS(0.609)PQLSDFGLER;S(0.155)PRS(0.845)PQLSDFGLER 111.65 2.425e-06 125616000.0 2265.4 2566.7 2513.2 2623.9 2793.2 3044.3999999999996 2514.2 3073.7 3343.7 3590.7 3776.5 True False 2495.381740300664 2783.004816834433 2683.7608650993066 2785.972343690734 2597.0152680168803 3019.607415767603 2609.879256823029 3012.392642228998 3203.1759170299697 3363.9825892073027 3312.0144412059285 0.7534332306208417 0.8402755683097567 0.8103107376917504 0.8411715568113106 0.7841195484254254 0.911713239592078 0.7880035860812108 0.9095348754373679 0.9671382700443993 1.0156907975263696 1.0 11.693493248021896 -8.567289502246716 1.7475674347850079 0.987482515432744 0.8203382280844017 0.7837551970058244 0.040536866616886935 0.10451314285601344 0.6245718954452619 0.006761987998198216 0.0078093922022471835 2.708385610524051e-09 8.567289502246716 -0.1671442873483423 SPRS(ph)PSGHPHVR ddPTM_A549_PD325901_60min_R1 1 SPRSPSGHPHVR 12 1 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 1 S(0.075)PRS(0.92)PS(0.005)GHPHVR 53.924 0.0091434 22295000.0 1192.3 1155.3 1052.2 1134.5 1063.7 1497.1 1623.6 1332.5 1477.8 1386.3 1547.0 True False 1313.3414182751308 1252.6611855257024 1123.6086193926033 1204.5754883635568 988.9893815657872 1484.9081139619223 1685.38698646801 1305.922242173972 1415.6932051879326 1298.768781412561 1356.7288072409817 0.9680205883929871 0.923295192701842 0.8281748079614766 0.8878528132775179 0.7289514133461774 1.0944767340656705 1.2422430904930672 0.9625521586953484 1.0434607105209623 0.9572795789998099 1.0 10.40591665792531 -7.280604437992634 24.97475971502985 1.0392688347299177 0.8693448370643514 0.4933266090836609 0.09185421074446191 552.7331477154706 720287.3534507891 0.013509137595586258 0.021615630005925788 5.2407755706374444e-08 7.280604437992634 -0.16992399766556632 SPRT(ph)PPQR ddPTM_A549_MK2206_60min_R1 2 SPRTPPQR 8 1 E5RGJ4;E5RJ36;Q14CS0 E5RGJ4 UBXN2B UBX domain-containing protein 2B 1 S(0.148)PRT(0.852)PPQR;S(0.003)PRT(0.997)PPQR 60.518 0.004461199999999999 94112000.0 1154.54 1486.3000000000002 1395.0 1145.1 1655.42 1649.6999999999998 1439.03 1113.53 1754.15 2483.9700000000003 2466.4 True False 1349.398126207069 1561.9463214994146 1592.8319764577927 1425.6495514054918 1411.9099109216143 1824.270159017766 1700.4831238939694 1271.3762875426025 1356.8378258019416 1922.8394518079124 1853.9248108229137 0.7278602229872002 0.8425079120690462 0.8591675170206995 0.76898995206428 0.7615788421834112 0.9840043934726863 0.9172341369870145 0.6857755396122394 0.731873168685667 1.0371722955443965 1.0 10.856367018780558 -10.927369554103464 1.2020335171372392 0.9992932856659293 0.8064848884110973 0.4668652978656236 0.08534106408907245 0.3917013257929635 1.0116285070741986 0.061601247346638625 0.014745662737139951 1.1820352986343913e-11 10.927369554103464 -0.192808397254832 SPRT(ph)PPQR ddPTM_A549_PD325901_60min_R1 2 SPRTPPQR 8 1 E5RGJ4;E5RJ36;Q14CS0 E5RGJ4 UBXN2B UBX domain-containing protein 2B 1 S(0.132)PRT(0.868)PPQR;S(0.04)PRT(0.96)PPQR 79.20100000000001 0.0016389 207030000.0 3697.5 3808.8 4048.1 3846.5 4345.5 4043.2 3816.5 4000.7 4209.4 3642.7 4095.4 True False 4072.867478044364 4129.780942984765 4322.82840920281 4084.089568964676 4040.287071161162 4010.2735197186867 3961.7389959689363 3920.9029000115665 4032.4935565828123 3412.6993003329303 3591.6917628795836 1.133969100616531 1.1498149662135195 1.2035633051476133 1.137093558855485 1.1248980530339063 1.1165416701859492 1.1030286721465967 1.0916590729010784 1.1227281801458995 0.9501648598032396 1.0 11.810447828714944 -14.999999999996264 0.1562324249811002 0.49056381708017616 1.1739027916194544 0.8440589401395883 0.02651016539030238 16.442982360521707 0.16699819504642538 2.566735004198381 0.040133357984354634 1.0000000000086016e-15 14.999999999996264 0.6833389745392783 SPS(ph)AGDVHILTGFAK ddPTM_A549_PD325901_60min_R1 3 SPSAGDVHILTGFAK 15 0 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 S(0.429)PS(0.571)AGDVHILTGFAK;S(0.093)PS(0.907)AGDVHILTGFAK;S(0.135)PS(0.865)AGDVHILTGFAK 136.51 9.1556e-10 50858700.0 4667.8 4097.200000000001 5030.700000000001 4858.099999999999 5660.1 5706.3 5109.5 5046.299999999999 5184.799999999999 5108.799999999999 6460.700000000001 True False 5141.671619747256 4442.485423124652 5372.11355405662 5158.173803454382 5262.554102284959 5659.829784717737 5303.9448185256815 4945.647587754235 4966.900886627679 4786.229496126739 5666.07485775166 0.9074485863371577 0.7840498995608863 0.948119057535416 0.9103610405707178 0.9287830172390591 0.9988978131791926 0.9360880241935818 0.8728524969959018 0.876603470890002 0.8447169542030989 1.0 12.468133946772324 -10.875266836409489 1.096970614507829 1.0005716228352781 0.9057146487274004 0.0 0.06839478682957556 0.5229986697276368 1.1066065913846328 0.03821705168928811 0.009003450175799125 1.3327023501944721e-11 10.875266836409489 -0.09485697410787775 SPS(ph)ASITDEDSNV ddPTM_A549_PD325901_60min_R1 1 SPSASITDEDSNV 13 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;H0YFE4 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.374)PS(0.626)ASITDEDSNV 149.49 9.595799999999998e-13 7480300.0 496.1 538.35 586.45 568.66 764.71 888.14 676.49 641.52 817.51 798.35 564.15 True False 546.4637067904829 583.718643839489 626.2500236103332 603.7848366794362 710.9994077062833 880.9072823018786 702.2341971395317 628.7243803372957 783.1528976676043 747.9420447527372 494.7631264414996 1.104495621411464 1.1797941532906604 1.265757268765219 1.2203513245258533 1.437050114910597 1.7804626804702601 1.4193341411479727 1.2707583624092802 1.582884527592627 1.511717435638715 1.0 8.950594173350375 -5.852427848345107 1.487469545313177 1.3361289783728822 1.1111736628729811 0.16282909295961923 0.19883099176676056 1.0851616823022694 4.03212009106377 0.037591010560022724 0.25919965032144465 1.404663028342725e-06 5.852427848345107 -0.2249553154999011 SPS(ph)DLLDASAVSATSR ddPTM_A549_PD325901_60min_R1 1 SPSDLLDASAVSATSR 16 0 K7EJ05;K7EPP9;K7ELY2;X6R2W0;K7EIY4;Q5U8S2;O60499;K7EQ84;O60499-2 K7EJ05 STX10 Syntaxin-10 1 S(0.141)PS(0.859)DLLDASAVSATSR 95.428 5.830700000000001e-06 3252000.0 2050.0 2408.7 1526.6 1886.1 2310.3 1751.8 1961.9 2257.0 2362.3 2340.9 2192.4 True False 2258.114490869764 2611.689602333384 1630.2042561915496 2002.6001133561085 2148.03249810232 1737.5339216074378 2036.5611780928743 2211.9823644177523 2263.0207461195364 2193.095174499506 1922.7486987686684 1.1744199813089793 1.3583104250731852 0.8478509215663675 1.0415298237562596 1.1171675734212816 0.903671874915405 1.059192592041327 1.1504271805433073 1.1769716695524375 1.1406041652265675 1.0 10.908954500937558 -5.736770692920545 24.99978839792469 1.063616602500166 1.266365201391978 0.3809892392458537 0.10564945981154328 196.69585697598657 199332.79248367838 0.014912880177570944 0.05770530389585732 1.8332821381231324e-06 5.736770692920545 0.20274859889181185 SPS(ph)DSGYSYETIGK ddPTM_A549_PD325901_60min_R1 2 SPSDSGYSYETIGK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.304)PS(0.695)DS(0.001)GYSYETIGK;S(0.044)PS(0.953)DS(0.003)GYSYETIGK 259.72 2.6595999999999995e-70 80001000.0 41279.0 43104.0 38579.0 41214.0 47258.0 44632.0 43555.0 48851.0 50011.0 54196.0 58698.0 True False 45469.61369200629 46736.52535350113 41197.20293437302 43759.695176214795 43938.76111124938 44268.53178969243 45212.509359210504 47876.62848213185 47909.21158793726 50774.055310852775 51478.51811727938 0.8832735547751495 0.9078840468372662 0.8002795037828543 0.8500573982436826 0.8535358576396318 0.8599418438743514 0.8782791543495185 0.9300312097768308 0.93066415545975 0.9863154023815975 1.0 15.651682903667053 -8.977919810470866 0.5478447147599684 0.9916018472503549 0.8536637730779482 0.7772992326564296 0.027099125193636508 0.24345612636739378 0.16852552938569867 0.011206707100551733 0.009269383612092822 1.0521561293784643e-09 8.977919810470866 -0.13793807417240678 SPS(ph)DSSTASTPVAEQIER ddPTM_A549_MK2206_60min_R1 2 SPSDSSTASTPVAEQIER 18 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 S(0.071)PS(0.823)DS(0.104)S(0.001)TASTPVAEQIER;S(0.031)PS(0.63)DS(0.338)STASTPVAEQIER 347.33 8.543899999999997e-220 43307000.0 9173.7 8808.1 7392.9 7338.3 9267.5 7531.7 7117.0 7762.700000000001 10914.8 11774.5 9984.1 True False 10721.996284568577 9256.39466756308 8441.324386204167 9136.183829428806 7904.2630265830185 8328.699494862163 8410.066776059828 8863.086497271712 8442.615227354008 9114.632272254603 7504.772422858036 1.428690395982098 1.2334011141190573 1.1247941856962351 1.217383194938972 1.053231541373355 1.1097870828827014 1.1206291546489067 1.1809933730004287 1.1249661884002624 1.2145114813199738 1.0 12.87359260842115 -2.0000000000000004 0.4061075066938017 1.0672328684407812 6.646940792289941 0.5500316939321199 0.07225047017441351 26.434658078795135 0.3046300390282831 0.014634001903187999 120.02235326570683 0.00999999999999999 2.0000000000000004 5.57970792384916 SPS(ph)EER ddPTM_A549_PD325901_60min_R1 1 SPSEER 6 0 Q9H0G5;A0A024QZ33;B3KS81 Q9H0G5 NSRP1;CCDC55;SRRM5 Nuclear speckle splicing regulatory protein 1;Serine/arginine repetitive matrix protein 5 1 S(0.052)PS(0.948)EER 77.923 0.044334 18621000.0 3393.7 3031.4 2984.5 2298.2 2726.4 2041.5 1460.4 1911.2 2791.1 3148.0 4269.6 True False 3738.2259256901048 3286.866716699224 3187.0461172564396 2440.154594409102 2534.9070695693913 2024.8747008571668 1515.9763211615432 1873.0796166926043 2673.799773311702 2949.2347427589602 3744.466267224369 0.9983334496590646 0.8777931171311243 0.8511349521700662 0.6516695358609537 0.67697420370899 0.5407645726658208 0.4048577855891005 0.5002260624131747 0.7140669944647916 0.7876248662122723 1.0 11.870544377577229 -5.660144699064448 1.9252746597521164 0.7560717032115261 0.9883087156094376 0.17601489549495408 0.17052634289082835 0.7937964631729593 5.00894881755372 0.03218229867147501 0.2470560819119295 2.187032822774181e-06 5.660144699064448 0.2322370123979115 SPS(ph)EIS(ph)VHVGIDDT(ph)SRNSPK ddPTM_A549_PD325901_60min_R1 1 SPSEISVHVGIDDTSRNSPK 20 1 Q04656-5;Q04656;Q04656-2;Q04656-3;Q04656-4 Q04656-5 ATP7A Copper-transporting ATPase 1 3 S(0.608)PS(0.671)EIS(0.721)VHVGIDDT(0.393)S(0.362)RNS(0.245)PK 46.29600000000001 0.0084242 3636700.0 638.6 617.51 695.06 586.84 688.6 882.37 671.57 702.85 695.65 907.29 754.16 True False 703.4302018875273 669.5497348515335 742.2309513353193 623.0877739896606 640.2351115410368 875.1842712688411 697.1269638472047 688.8311053748417 666.414249688039 850.0035545609203 661.4031010141302 1.0635423402293653 1.0123171993371545 1.1222066394869568 0.9420696289967182 0.9679953277499961 1.3232237192824163 1.054012239704197 1.0414694220796004 1.0075765424538004 1.2851520551651614 1.0 9.369385999451348 -8.581541084516788 2.7493346071414333 1.0033608446875442 1.069371294385124 0.0 0.12672529276552666 0.5176648593455903 7.898291199000392 0.016378372021859194 0.01884616626136491 2.6209510833727355e-09 8.581541084516788 0.06601044969757974 SPS(ph)FASEWDEIEK ddPTM_A549_MK2206_60min_R1 1 SPSFASEWDEIEK 13 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.089)PS(0.911)FASEWDEIEK 151.54 5.233199999999999e-13 8633300.0 2626.8 2832.3 2160.2 1966.1 3102.1 2729.2 2316.5 2412.1 3451.0 3287.1 3650.2 True False 3070.13962090593 2976.4519722685836 2466.548842683958 2447.7945882615836 2645.7851993270206 3018.002132503663 2737.378064738317 2754.02256174644 2669.354010114587 2544.5418270099017 2743.7545996050126 1.1189556170030306 1.0848098341947454 0.8989684584179063 0.8921332063056824 0.9642936725128058 1.0999533751809039 0.997675982076672 1.003742303390728 0.972883657488488 0.9273940998135222 1.0 11.421935737832827 -8.986435493690658 0.0030876734554173353 1.1723183820805416e-07 1.9882575887063396 0.050893143720141976 0.07215342596422815 60465.90757794943 129.26514508074942 41728.23154406312 41505.40362022611 1.0317263116748826e-09 8.986435493690658 1.9882574714745014 SPS(ph)FASEWDEIEK ddPTM_A549_PD325901_60min_R1 2 SPSFASEWDEIEK 13 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.012)PS(0.988)FASEWDEIEK;S(0.117)PS(0.882)FAS(0.001)EWDEIEK 163.27 8.5432999999999985e-19 25404000.0 6025.5 5120.6 4509.799999999999 5821.4 5117.5 5658.4 5437.1 5364.0 6420.7 5887.9 7291.9 True False 6637.204324261346 5552.130932747261 4815.862147630452 6180.974656641351 4758.064454416578 5612.31986643654 5644.011815795282 5257.010812023405 6150.860307585702 5516.136989164697 6395.04252716258 1.0378671128565913 0.8681929649669881 0.7530617860906086 0.9665259660726278 0.7440238957296952 0.8776047762932819 0.8825604820957269 0.8220446994206138 0.9618169514057603 0.8625645514842503 1.0 12.642738237752198 -8.883897507538261 5.251127283144309 0.9834739958114909 0.8651118731737186 0.07006145654190599 0.08774790861685995 0.17656743599808636 7.352826379860179 0.01320437926369753 0.013964130428233735 1.3064791777220001e-09 8.883897507538261 -0.11836212263777224 SPS(ph)FGAGEGLLR ddPTM_A549_MK2206_60min_R1 2 SPSFGAGEGLLR 12 0 Q96PE2 Q96PE2 ARHGEF17 Rho guanine nucleotide exchange factor 17 1 S(0.338)PS(0.662)FGAGEGLLR;S(0.013)PS(0.987)FGAGEGLLR 117.27 2.2228e-05 20072600.0 3066.0 3785.7 3429.6 2997.94 4883.0 3363.8 3379.5 3362.2 4883.9 5031.1 5118.9 True False 3583.4658434968696 3978.37595996793 3915.968850508706 3732.4354345826428 4164.717168470987 3719.755083290274 3993.5114050434454 3838.8021463056584 3777.704447985694 3894.5710157492986 3847.7358555471196 0.93131804729546 1.0339524617399274 1.017733284592085 0.9700342161486337 1.0823812561007506 0.966738680340455 1.037886059482531 0.997678190609529 0.9817993203820204 1.012172134980279 1.0 11.909794047134806 -5.242669643533058 23.774921249017453 1.0010008102604808 0.9313179259055445 0.28664140301983687 0.03301163326303282 1977.91396483311 2505273.4504792453 0.004151025210176482 0.18075737795912314 5.719135109193343e-06 5.242669643533058 -0.0696828843549363 SPS(ph)FGPK ddPTM_A549_PD325901_60min_R1 2 SPSFGPK 7 0 Q9H5Y7 Q9H5Y7 SLITRK6 SLIT and NTRK-like protein 6 1 S(0.24)PS(0.76)FGPK;S(0.33)PS(0.67)FGPK 64.04 0.026075 38964000.0 7184.6 7062.900000000001 8027.8 7624.2 8817.2 7608.3 8151.2 8104.9 9128.7 9654.599999999999 9730.1 True False 7913.975302977023 7658.115370249702 8572.614783083016 8095.129518185486 8197.910289688689 7546.340527323829 8461.398376507786 7943.241411328952 8745.052484909376 9045.006908335657 8533.359384185826 0.9274161495698099 0.8974326552379662 1.0046002280145307 0.9486450943561013 0.9606896792465114 0.8843340808203675 0.9915670951569907 0.9308457611722658 1.0248077095072152 1.0599585111929104 1.0 13.058898093355717 -8.76153703637603 24.999999978264118 1.0117147542276028 0.9441286991765806 0.4984993948248361 0.03698852237658924 1.664618085220637 426069.7528633458 0.005619699595284788 0.006170694938057272 1.7316613493995161e-09 8.76153703637603 -0.06758605505102222 SPS(ph)GAGEGASCSDGPR ddPTM_A549_MK2206_60min_R1 1 SPSGAGEGASCSDGPR 16 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 S(0.012)PS(0.986)GAGEGAS(0.001)CSDGPR 81.44800000000001 0.00024401 5419200.0 411.3 380.25 397.59 480.47 630.35 439.73 272.59 578.23 403.16 678.94 613.27 True False 480.7173846804513 399.60310082093315 453.9742405160242 598.185171569118 537.6263500195955 486.2619367308494 322.116074537888 660.1958732551074 311.8449037142269 525.5669824556916 460.9781336090528 1.0428203631197375 0.8668591234304169 0.984806452665782 1.2976432675577363 1.1662729982666524 1.0548481615035548 0.6987664946621281 1.432163100853299 0.6764852407916965 1.1401126086848523 1.0 8.848554508147405 SPS(ph)GAGEGASCSDGPR ddPTM_A549_PD325901_60min_R1 1 SPSGAGEGASCSDGPR 16 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 S(0.024)PS(0.976)GAGEGASCSDGPR 118.51 1.292e-07 7494600.0 590.02 643.47 501.44 523.13 706.65 579.92 467.13 867.67 517.32 438.65 580.65 True False 649.9183960502326 697.6974751581612 535.4707338036751 555.4425519855687 657.0173418101564 575.1973237918631 484.9068877733443 850.363641176053 495.5788394287597 410.95356413952277 509.23373104361775 1.276267372780466 1.3700928132319672 1.0515225154199577 1.0907418698428542 1.290207819626702 1.1295350027443398 0.9522285312474916 1.6698886765284136 0.9731854141184366 0.8070038159045735 1.0 8.99218417460238 SPS(ph)LDNPTPFPNLGPSENPLKR ddPTM_A549_MK2206_60min_R1 2 SPSLDNPTPFPNLGPSENPLKR 22 1 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653-3;Q14653-2;Q14653;Q14653-4 M0R0R8 IRF3 Interferon regulatory factor 3 1 S(0.47)PS(0.529)LDNPT(0.001)PFPNLGPSENPLKR;S(0.462)PS(0.537)LDNPT(0.001)PFPNLGPSENPLKR 96.01899999999999 3.2053e-07 6453600.0 3234.8900000000003 3528.75 3818.55 3512.5 4771.3099999999995 3730.84 3061.46 3430.6800000000003 5533.799999999999 4979.6 4313.12 True False 3780.8603465328097 3708.348302490119 4360.077809106024 4373.062657682115 4069.456619516136 4125.635012468842 3617.6876538198844 3916.9893960168633 4280.403135662734 3854.704901517603 3242.0532679437747 1.1661931603396405 1.143827073773555 1.3448507623908783 1.348855893554046 1.2552096721400046 1.272537701111082 1.1158631135367958 1.2081816899020776 1.3202753878185096 1.1889702552488886 1.0 11.66269207964061 -10.885613905503728 1.0228747720184463 0.993374919279014 1.2475201284989705 0.18087569582538965 0.09254511553498797 0.3358908610580163 0.5965811434534726 0.06431781650312603 0.013887161582353409 1.3013259627976499e-11 10.885613905503728 0.25414520921995654 SPS(ph)LDNPTPFPNLGPSENPLKR ddPTM_A549_PD325901_60min_R1 2 SPSLDNPTPFPNLGPSENPLKR 22 1 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653-3;Q14653-2;Q14653;Q14653-4 M0R0R8 IRF3 Interferon regulatory factor 3 1 S(0.174)PS(0.826)LDNPTPFPNLGPSENPLKR;S(0.463)PS(0.537)LDNPTPFPNLGPSENPLKR 118.01 2.1377e-15 24483000.0 3873.6 4224.6 3806.2 4076.1000000000004 4619.3 4616.700000000001 4896.700000000001 4500.700000000001 3984.1 3739.1000000000004 4628.0 True False 4266.845020406396 4580.621868234987 4064.5116205399445 4327.871439505243 4294.856303719883 4579.103125862008 5083.046598077057 4410.930007769156 3816.662132080958 3503.012587881204 4058.7853393091546 1.051261563178075 1.1285696299018007 1.0014108361867111 1.0662971992113013 1.05816295878582 1.1281954434775348 1.2523565976372235 1.0867610969837445 0.9403458948953906 0.86306919312896 1.0 11.986832325583764 -8.719348212135726 8.033423599574991 0.9718561340974484 1.0987263816481376 0.49832392101920353 0.06975388105852504 0.16430037696383215 27.358275716364446 0.011144929472237282 0.012591252829689691 1.908322574726513e-09 8.719348212135726 0.1268702475506892 SPS(ph)LGSDLTFATR ddPTM_A549_PD325901_60min_R1 1 SPSLGSDLTFATR 13 0 Q13425 Q13425 SNTB2 Beta-2-syntrophin 1 S(0.034)PS(0.709)LGS(0.236)DLT(0.021)FATR 118.58 1.2321e-14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPS(ph)LLQSGAK ddPTM_A549_PD325901_60min_R1 1 SPSLLQSGAK 10 0 Q9BQG0;Q9BQG0-2;I3L1L3;I3L2H8 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.007)PS(0.991)LLQS(0.002)GAK 110.8 0.00017736 10234000.0 5875.5 5274.4 5975.5 6134.5 7094.1 6416.1 6401.2 6404.5 6418.7 6853.2 7003.9 True False 6471.97643468551 5718.89219850841 6381.033363600558 6513.414132539662 6595.8348893163975 6363.849408851174 6644.801168871042 6276.757223266944 6148.944360630516 6420.487782425573 6142.464701380167 1.0536448721034253 0.931041931298916 1.0388392402428925 1.0603909748274412 1.0738091645580579 1.0360416735355864 1.0817809286519797 1.021862970064216 1.001054895642932 1.0452624629626177 1.0 12.584601946604007 -8.610101203725348 4.461042380547697 1.0005943496602046 1.0380555341364734 0.03283485868684688 0.03979378887864868 0.2917392375745152 10.676074397603786 0.006510150692680402 0.0074032077470682425 2.454136961045567e-09 8.610101203725348 0.037461184476268894 SPS(ph)LNLLQNK ddPTM_A549_MK2206_60min_R1 1 SPSLNLLQNK 10 0 O43353-2;O43353 O43353-2 RIPK2 Receptor-interacting serine/threonine-protein kinase 2 1 S(0.233)PS(0.767)LNLLQNK 47.971000000000004 0.032098 1596200.0 1585.5 1886.1 1776.4 1937.8 2268.4 1725.7 1376.4 1965.6 2341.2 2452.1 2499.1 True False 1853.093638246668 1982.0944338155462 2028.3202315266117 2412.561086991147 1934.7213649313094 1908.312428573051 1626.47406358982 2244.2298193975394 1810.9219381281562 1898.1689069425881 1878.504498348825 0.9864728244598334 1.0551448961435945 1.0797526613907351 1.284298807435249 1.0299263944440367 1.0158679046286163 0.8658345322140374 1.1946896168575485 0.9640232108679682 1.01046811898031 1.0 10.875368855386393 -6.9875061843696 24.980809166213522 0.9937582367056236 1.1041331382126063 0.15409577792662021 0.09896140476464753 267.13027835434724 534111.0267702024 0.013685655691297715 0.02585234888692321 1.0291858714449315e-07 6.9875061843696 0.1103749015069827 SPS(ph)LSPSPPS(ph)PLEK ddPTM_A549_MK2206_60min_R1 1 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.299)PS(0.45)LS(0.077)PS(0.175)PPS(1)PLEK 80.706 0.00057251 3614900.0 2035.4 1906.1 1590.0 1618.9 2706.6 1815.5 1796.7 2173.9 2796.7 2337.2 2832.4 True False 2378.925759247727 2003.1123483886408 1815.4859086508175 2015.5305726751833 2308.4627254113407 2007.6150049686344 2123.1371331384994 2482.056982289535 2163.2519154121883 1809.2248967441042 2129.036909736791 1.1173717789335222 0.9408537443516101 0.8527263667191485 0.9466865339240923 1.0842755777760245 0.9429686238820688 0.9972288988644067 1.1658120960412974 1.0160706493715166 0.8497855948245516 1.0 11.055985245740528 -6.709742661479418 24.98605093145272 1.018579684614329 0.9547495262740455 0.03621819101144641 0.09444672181179162 167.7253979399732 81064.05901495268 0.011060307959760637 0.023023848886948653 1.9510003105380488e-07 6.709742661479418 -0.06383015834028338 SPS(ph)MPENLNRPR ddPTM_A549_MK2206_60min_R1 3 SPSMPENLNRPR 12 1 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;H0Y999 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 S(0.225)PS(0.775)MPENLNRPR;S(0.248)PS(0.752)MPENLNRPR;S(0.158)PS(0.842)MPENLNRPR 113.4 9.691900000000001e-06 114010000.0 7083.6 8244.2 6685.5 6209.3 9584.8 7743.6 7243.4 7428.2 11090.800000000001 11396.4 11484.5 True False 8279.138502607442 8663.794566174714 7633.604429110083 7730.5787787460695 8174.888616907782 8563.022612214327 8559.432019911726 8481.170097908425 8578.751508368256 8821.945324856455 8632.581693924649 0.959057069617314 1.003615705400394 0.8842782726843332 0.8955118008540386 0.9469807418864072 0.9919422619818037 0.9915263270471679 0.9824604502587236 0.9937643004763828 1.0219359211005294 1.0 13.075576366664269 -7.223820412392923 4.082096617006247 0.9951383900730378 0.9353082476279134 0.4799899177617952 0.030701185393960398 0.15498898617833867 5.759426022854477 0.004547510419200124 0.007903217369645697 5.972822211284615e-08 7.223820412392923 -0.05983014244512441 SPS(ph)MPENLNRPR ddPTM_A549_PD325901_60min_R1 2 SPSMPENLNRPR 12 1 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;H0Y999 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 S(0.189)PS(0.811)MPENLNRPR;S(0.121)PS(0.879)MPENLNRPR 65.092 0.001384 106682000.0 7898.6 7591.6 8149.4 8242.599999999999 9297.6 8457.6 8822.0 10028.1 8775.8 8749.3 10552.400000000001 True False 8700.460057358003 8231.370774722516 8702.467290323215 8751.726681697188 8644.568650978716 8388.72410970834 9157.726037583636 9828.081678607734 8406.983644666563 8196.86770483512 9254.521697175014 0.9401307103762974 0.889443133212944 0.9403476025108551 0.9456703401936691 0.9340913484072884 0.9064459930186384 0.989540717201957 1.0619761885271501 0.9084190323129108 0.8857148940865579 1.0 13.175942713661751 -7.759530187725578 24.9954928931906 0.9674561245748975 0.9262699916061743 0.17871536712982772 0.04594951830144215 75.23352877500041 984964.1491169294 0.00723368309897199 0.010431063956550324 1.7396817688916197e-08 7.759530187725578 -0.0411861329687232 SPS(ph)PAHLPDDPK ddPTM_A549_MK2206_60min_R1 2 SPSPAHLPDDPK 12 0 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.031)PS(0.969)PAHLPDDPK;S(0.007)PS(0.993)PAHLPDDPK 148.89 4.5741e-12 35851000.0 5267.1 5647.200000000001 5562.3 6977.4 6836.7 5823.1 5613.799999999999 6338.6 8719.400000000001 8559.8 8620.6 True False 6156.057711768547 5934.618358858572 6351.11777967826 8686.863313227392 5831.030486521726 6439.296576939055 6633.754793795792 7237.11596114837 6744.469822020612 6626.135234960716 6479.86710354363 0.9500283899961464 0.9158549494962822 0.980130869690991 1.3405928199479318 0.8998688388737053 0.9937389878594287 1.0237485874005048 1.1168617882904766 1.040834590316255 1.0225727054397606 1.0 12.6617485096509 -6.00506212105764 24.895575517483742 1.0381792645113745 0.9367044299750107 0.16414253510701793 0.1050014523527369 309.7646272638684 1523459.9765487246 0.013740511618105852 0.04112623503550161 9.884117031022887e-07 6.00506212105764 -0.10147483453636386 SPS(ph)PAHLPDDPK ddPTM_A549_PD325901_60min_R1 2 SPSPAHLPDDPK 12 0 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.245)PS(0.755)PAHLPDDPK;S(0.095)PS(0.905)PAHLPDDPK 182.55 3.8415e-19 63292000.0 19265.6 19146.1 16924.6 19969.9 23356.0 24945.0 20350.0 22990.0 24417.0 21353.0 29124.0 True False 21221.42952941488 20759.6090402438 18073.20513188753 21203.39536806647 21715.555133825816 24741.856190488375 21124.43038594727 22531.446414693888 23390.83840240474 20004.767935874213 25541.932632247153 0.8308466643836668 0.8127657894624002 0.7075895701435599 0.8301406034286066 0.8501923267313584 0.9686759630417056 0.8270490213131835 0.8821355352823822 0.9157818532836228 0.7832127750042622 1.0 14.640580070348564 -8.130227695819823 0.19231843899903484 1.0451308928695917 0.7196739672036094 0.0 0.08123903848792122 1.4590548661781622 0.20400144591634567 0.11884879742241497 0.1703272102422947 7.409216823629636e-09 8.130227695819823 -0.3254569256659823 SPS(ph)PAHLPDDPKVAEK ddPTM_A549_MK2206_60min_R1 1 SPSPAHLPDDPKVAEK 16 1 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.449)PS(0.551)PAHLPDDPKVAEK 97.271 1.7284e-06 62465000.0 4304.8 5320.0 5716.7 4975.3 5651.4 3789.7 3532.7 3351.8 7941.6 9762.3 10653.0 True False 5031.344997744725 5590.765276442772 6527.414021373664 6194.248723349708 4820.0865463643095 4190.723538600734 4174.545861990526 3826.9279144569973 6142.8402801292395 7556.989649788188 8007.566092157198 0.6283238801703486 0.6981853427246141 0.8151558096743989 0.7735494970708394 0.6019415251639594 0.5233454823064438 0.5213251834510834 0.4779139966394011 0.7671295134417541 0.9437311616059822 1.0 12.967148085302874 -9.655004226149758 1.0613668255521866 0.9567554035891076 0.6400505835801384 0.5888674461866037 0.10581217113578395 0.24142475236582656 0.562405730533546 0.03561191371704743 0.02407423145084711 2.2130731739321362e-10 9.655004226149758 -0.31670482000896916 SPS(ph)PAHLPDDPKVAEK ddPTM_A549_PD325901_60min_R1 2 SPSPAHLPDDPKVAEK 16 1 Q92615;H0Y4V9;A0A087X183;H0Y641 Q92615 LARP4B La-related protein 4B 1 S(0.445)PS(0.555)PAHLPDDPKVAEK;S(0.115)PS(0.885)PAHLPDDPKVAEK 128.14 2.3804e-10 297340000.0 5947.2 6283.200000000001 6469.1 8310.8 8852.6 10008.1 8485.7 9466.0 8857.900000000001 9282.8 8487.9 True False 6550.955365902755 6812.707314892321 6908.132027858479 8824.139240803748 8230.82391581206 9926.59735177498 8808.627957053213 9277.193204066656 8485.633267177009 8696.682423787444 7443.942109231241 0.8800384621179291 0.9152015444133929 0.9280206544448668 1.1854121259031452 1.105707674110604 1.3335135075090114 1.1833283800165 1.2462742278129753 1.1399381057321718 1.1682899055599423 1.0 12.861851120412489 -6.1852225905023435 6.116722621356934 1.1168730578989041 0.9051646544852743 0.5845130228124489 0.09085616636875073 0.18017941216440397 11.524363519127434 0.015606426296895017 0.04188522412816675 6.52795887082985e-07 6.1852225905023435 -0.21170840341362984 SPS(ph)PAVPLR ddPTM_A549_PD325901_60min_R1 1 SPSPAVPLR 9 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 S(0.262)PS(0.738)PAVPLR 126.29 6.3013e-05 36531000.0 3123.7 3279.2 4009.9 4045.2 3979.1 3901.4 3445.9 4139.8 4378.7 3931.1 3925.9 True False 3440.8157244536 3555.5496923533988 4282.035927487551 4295.062816684234 3699.6217431497844 3869.6282919050464 3577.0356101688317 4057.2284413897282 4194.678466339424 3682.8896751142756 3443.039188330558 0.9993542147633714 1.03267767163504 1.243679114080546 1.24746265777091 1.0745221128149973 1.1238989974381706 1.0389180646832095 1.1783857863543445 1.2183069192347231 1.0696624330029816 1.0 11.749466886275233 -11.04601924888282 1.3676195779693232 1.0005090311057863 1.1401316791165041 0.12670200756601158 0.08527717778282096 0.48926256359496073 1.641378787096291 0.062018435231040586 0.014071031750282171 8.99457714710248e-12 11.04601924888282 0.1396226480107179 SPS(ph)PEEK ddPTM_A549_MK2206_60min_R1 1 SPSPEEK 7 0 P25686 P25686 DNAJB2 DnaJ homolog subfamily B member 2 1 S(0.497)PS(0.503)PEEK 85.71600000000001 0.013478 10299000.0 5118.1 5600.9 3533.7 2711.7 1523.8 1107.5 542.51 1151.8 1437.1 6539.0 6614.4 True False 5981.910154468798 5885.961886621862 4034.8317958486737 3376.0666217328376 1299.6510385656538 1224.694914900999 641.0770446368158 1315.0711772395637 1111.5991445771297 5061.835358467266 4971.861931846856 1.2031529106132575 1.1838546539114074 0.811533355341967 0.6790346691060984 0.26140127308058275 0.24632520606743233 0.12894103927754894 0.26450275475591595 0.22357803973937249 1.0180965255780923 1.0 12.279570518098831 -5.990766002785787 1.8732397974572743 0.5089269431803308 1.223416806007975 0.4768084440412813 0.2918071799724316 0.3108788783672816 2.055833526688998 0.051734931597783196 0.23404416206102086 1.0214897125852179e-06 5.990766002785787 0.7144898628276443 SPS(ph)PEEK ddPTM_A549_PD325901_60min_R1 1 SPSPEEK 7 0 P25686 P25686 DNAJB2 DnaJ homolog subfamily B member 2 1 S(0.016)PS(0.984)PEEK 104.05 0.010205 22894000.0 5292.2 5225.4 4099.3 5017.4 5315.9 4401.5 3332.3 3664.3 4607.2 5464.1 5944.0 True False 5829.460248088276 5665.762796542894 4377.503149093424 5327.3134026578355 4942.5295228594205 4365.655643312673 3459.112500004526 3591.2126619122605 4413.575405969577 5119.095793490861 5212.925682120486 1.1182703540321717 1.0868681316473718 0.8397401797051454 1.021943094437291 0.9481296730953825 0.8374674625203625 0.6635645146196381 0.6889054018609078 0.846659951648159 0.9820005320713765 1.0 12.34787757701487 -5.723230021532154 8.085373113083076 0.8900033994236863 1.1045500065184146 0.3765917059245466 0.11309828567198021 0.23065532455992474 41.55596421179847 0.01760469712850036 0.06770721693549024 1.8913416152916996e-06 5.723230021532154 0.21454660709472828 SPS(ph)PEPIYNSEGK ddPTM_A549_MK2206_60min_R1 2 SPSPEPIYNSEGK 13 0 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 1 S(0.047)PS(0.953)PEPIYNSEGK;S(0.206)PS(0.794)PEPIYNSEGK 195.78 2.544e-30 39310000.0 6451.700000000001 8176.3 6222.1 6881.0 9174.7 8115.4 7780.5 8051.4 10735.5 8574.7 10634.5 True False 7540.5892310791805 8592.438746199066 7104.487341016512 8566.845308899825 7825.113783651597 8974.166241433466 9194.116137576717 9192.710606378374 8303.92639107075 6637.669314612214 7993.660152731218 0.9433212179407908 1.074906686302302 0.8887652471176299 1.0717049693403298 0.9789149944006523 1.12266046716625 1.150176009726325 1.1500001789840255 1.0388140391774754 0.8303667140945818 1.0 12.964640523120778 SPS(ph)PEPIYNSEGK ddPTM_A549_PD325901_60min_R1 2 SPSPEPIYNSEGK 13 0 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 1 S(0.01)PS(0.99)PEPIYNSEGK;S(0.081)PS(0.919)PEPIYNSEGK 211.94 2.0128e-37 53988000.0 18152.7 19888.3 18442.8 19649.4 21559.5 17039.1 18819.1 18063.7 19567.7 19806.4 22965.0 True False 19995.54874068856 21564.35683899493 19694.43931356577 20863.09881097478 20045.235096237273 16900.339218895595 19535.27114870666 17703.405332801496 18745.337617509736 18555.82052381863 20140.450587129377 0.9928054317447388 1.0706988279981924 0.9778549505814618 1.0358804397507972 0.9952724249896896 0.8391241867098865 0.9699520407547657 0.8789974810253124 0.9307307965338582 0.9213210222653413 1.0 14.29780833958458 -7.010972973097016 24.78809923015132 0.9500144326773372 1.0194641120855197 0.41328932381490135 0.04932986292805615 489.2453732088728 1105216.1453013264 0.007694414506096699 0.013875214595172054 9.750503149108508e-08 7.010972973097016 0.06944967940818247 SPS(ph)PGLFR ddPTM_A549_PD325901_60min_R1 2 SPSPGLFR 8 0 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 S(0.179)PS(0.821)PGLFR;S(0.166)PS(0.834)PGLFR 88.181 0.0026919 128490000.0 9078.0 8936.2 8824.3 9837.4 11483.6 9331.6 9932.8 10096.2 10077.900000000001 9897.099999999999 10730.8 True False 9999.591877129616 9689.284935596628 9423.170062826603 10445.03385564359 10677.031552269314 9255.606543482123 10310.798139436716 9894.823370684326 9654.360909841289 9272.19541695035 9410.97962814578 1.0625452686374381 1.0295724056843678 1.001295341735133 1.1098774270433256 1.1345292386285806 0.9834902326003366 1.0956136923939155 1.0514126862087232 1.0258614183976786 0.9852529474423297 1.0 13.2001291915805 -9.073836245133586 1.1903016236787614 1.0072781212666755 1.0591828789045372 0.24830543305497577 0.042958909222677026 0.4672034864614403 1.3606964814464768 0.009585719772395838 0.008883291583562982 8.4365280511606e-10 9.073836245133586 0.05190475763786173 SPS(ph)PISNQPSPR ddPTM_A549_MK2206_60min_R1 2 SPSPISNQPSPR 12 0 F6SS63;Q8N5C8-2;Q8N5C8 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 S(0.051)PS(0.944)PIS(0.005)NQPSPR;S(0.007)PS(0.993)PISNQPSPR 145.81 7.2627e-12 26878000.0 4029.0 4527.1 3642.6 3046.0 4919.6 4030.9 3223.0 3076.0 5754.2 5469.5 6066.8 True False 4708.996700407337 4757.510053192494 4159.175453365702 3792.270136740136 4195.9333569547125 4457.44716250513 3808.5773808122567 3512.0324198549197 4450.8828875692125 4233.936151267274 4560.246124838004 1.0326189796553178 1.0432572986094029 0.912050652422505 0.8315933028449973 0.9201111611281215 0.9774575846305826 0.8351692598494452 0.7701409800506501 0.9760181283476939 0.9284446574509568 1.0 12.154895976047897 -8.973240570992155 24.98374158702346 0.9894198625349522 0.9135311320472232 0.06331436646739041 0.08112163436780517 256.54847273542777 239526.74616926553 0.014656425074374016 0.015295193718891126 1.0635537152025108e-09 8.973240570992155 -0.07588873048772893 SPS(ph)PISNQPSPR ddPTM_A549_PD325901_60min_R1 2 SPSPISNQPSPR 12 0 F6SS63;Q8N5C8-2;Q8N5C8 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 S(0.053)PS(0.947)PISNQPSPR;S(0.359)PS(0.445)PIS(0.196)NQPSPR 140.31 1.8012999999999998e-09 29920000.0 5920.799999999999 6150.0 5973.9 6225.7 7140.6 6922.4 6468.8 7018.0 7502.4 7445.7 8133.200000000001 True False 6521.875257337411 6668.28208342688 6379.324777978974 6610.247349409433 6639.068889732691 6866.026269514407 6714.973723863184 6878.02048448551 7187.1002182987795 6975.577231308891 7132.867960602687 0.914341228992321 0.9348668894837424 0.8943562131269226 0.926730648305861 0.9307713147646332 0.9625898456886992 0.9414128736088094 0.9642713873963756 1.0076031489711623 0.9779484591383764 1.0 12.800266552160494 -8.069091175156883 0.7919201761289956 1.0050340187551625 0.9178775887581644 0.7679973269862354 0.016263566150907998 0.1439407113674242 0.18147415702822833 0.0030987733709505172 0.004685014372938362 8.529210342091351e-09 8.069091175156883 -0.08715642999699813 SPS(ph)PKPTK ddPTM_A549_PD325901_60min_R1 1 SPSPKPTK 8 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 S(0.066)PS(0.931)PKPT(0.003)K 52.79 0.0073588 3691000.0 4047.2 3538.3 3545.1 3185.3 4024.1 3635.4 3110.6 3581.2 3838.5 3611.9 4309.0 True False 4458.068764608831 3836.4849586649284 3785.6918044180943 3382.0487466588297 3741.461098391354 3605.794507713028 3228.9755851856335 3509.77015660295 3677.1811937433195 3383.8440175892906 3779.020317001548 1.179689017429277 1.015206227234305 1.0017654013095754 0.8949538406669129 0.9900611228679513 0.9541611860330073 0.8544477971337434 0.928751332934819 0.9730514485989764 0.8954289031910236 1.0 11.883796559586658 -5.149074988656725 1.7331335218146613 0.966452575786122 1.2973926242109235 0.6398697674862216 0.04948734123452865 0.6469614790777836 1.5093378365099677 0.006978905428797369 0.3844796642863605 7.094552573345582e-06 5.149074988656725 0.3309400484248015 SPS(ph)PLTGK ddPTM_A549_MK2206_60min_R1 2 SPSPLTGK 8 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.26)PS(0.74)PLTGK;S(0.013)PS(0.986)PLT(0.001)GK 116.13 0.0012912000000000002 46896000.0 9520.099999999999 10563.0 8986.900000000001 10012.2 14842.099999999999 11099.7 10957.1 10892.8 16170.9 14421.0 16045.5 True False 11126.860135901683 11100.611581779138 10261.377555002537 12465.189449464731 12658.84675121098 12274.26288661546 12947.8632390003 12436.887757800925 12508.216969620975 11163.286084180523 12060.959516728453 0.9225518185737062 0.9203754947011206 0.850792803074257 1.0335155699822733 1.0495721118749517 1.0176854395034787 1.073535088235867 1.0311690160762965 1.0370830738858032 0.925571972005804 1.0 13.558057065805716 -6.273499140096203 24.893985033111296 1.0259980143314111 0.9001535847793507 0.6563828117596142 0.03954183622868256 206.49562561379 426252.23809881473 0.003883774710407014 0.009088149113420653 5.327222791129167e-07 6.273499140096203 -0.12584442955206043 SPS(ph)PLTGK ddPTM_A549_PD325901_60min_R1 2 SPSPLTGK 8 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 S(0.006)PS(0.994)PLTGK;S(0.111)PS(0.889)PLTGK 126.39 0.0010772 72316000.0 8686.1 8997.5 9700.4 10241.2 9906.3 10226.5 9441.599999999999 10874.7 9630.9 10393.5 9570.7 True False 9567.906477631144 9755.75090172899 10358.727477243881 10873.775664547255 9210.515662879723 10143.218774585272 9800.905254641768 10657.795577462892 9226.14676535691 9737.2526362342 8393.56457366598 1.1399097956128854 1.1622893725434293 1.2341273348564463 1.2954896062469934 1.0973306492186703 1.2084518663749446 1.1676690122086135 1.26975797754636 1.0991929214797582 1.1600855096515148 1.0 13.035067908273511 -9.328980465025857 1.0828965825339567 1.0225944382468128 1.196450227456694 0.21369232673488903 0.07145995515481263 0.20388364209894194 0.5007666051772461 0.014904344743658836 0.012034989422396846 4.688344702862758e-10 9.328980465025857 0.1738557892098811 SPS(ph)PLVSLQAVK ddPTM_A549_MK2206_60min_R1 1 SPSPLVSLQAVK 12 0 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 S(0.139)PS(0.86)PLVSLQAVK 73.46600000000001 0.0014079000000000001 1344500.0 1346.7 1581.0 1160.6 1288.4 2070.8 1570.2 1116.0 1390.5 2090.9 2214.8 1850.1 True False 1573.99003634613 1661.4661470030103 1325.1905318114077 1604.0580578384738 1766.1880631721724 1736.3575217855953 1318.7627542620162 1587.6076332276543 1617.31448848119 1714.4751417545956 1390.6691098376057 1.1318221029083844 1.1947242771481612 0.9529157744548995 1.1534433651336273 1.2700275361537423 1.2485770407227619 0.9482936990065263 1.1416142215261011 1.1629757769409652 1.2328418957654148 1.0 10.441563476372556 -10.850745198898302 0.8629921567493823 0.9910940595769727 1.1352773144938415 0.0 0.1191607776272424 0.9338649957310617 1.103995683890206 0.09271350910052448 0.017704708394523594 1.410115872476007e-11 10.850745198898302 0.14418325491686879 SPS(ph)PLVSLQAVK ddPTM_A549_PD325901_60min_R1 2 SPSPLVSLQAVK 12 0 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 S(0.5)PS(0.5)PLVSLQAVK;S(0.115)PS(0.885)PLVSLQAVK 184.71 3.1375e-19 48543000.0 22722.0 20256.9 21967.0 23986.0 23512.0 21343.4 23690.0 26204.0 22731.0 21787.0 22089.0 True False 25028.720712947685 21964.020054596724 23457.812718301968 25467.56074384159 21860.5982319966 21169.58642678171 24591.535913665422 25681.340663359668 21775.695119181815 20411.365101807325 19372.193033707856 1.29199211825927 1.1337911002837446 1.2109012478600167 1.314645208187205 1.128452426318429 1.092782133130016 1.269424472019035 1.3256806092461404 1.1240696952220037 1.0536424588734634 1.0 14.24169966337003 -9.513687109880852 1.0948069589721867 1.0257685568318473 1.2133077897457851 0.4570386994125931 0.07843337879217273 0.2591483802756143 0.6464501704905229 0.021795790117224528 0.016069969988837265 3.064170238855929e-10 9.513687109880852 0.18753923291393781 SPS(ph)PPDGSPAATPEIR ddPTM_A549_MK2206_60min_R1 2 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 S(0.205)PS(0.795)PPDGSPAATPEIR;S(0.019)PS(0.981)PPDGSPAATPEIR 258.96 5.869599999999999e-78 68929000.0 6441.1 6922.200000000001 6450.4 6163.700000000001 10114.3 7154.299999999999 7239.299999999999 6384.9 8714.2 10488.1 10555.7 True False 7528.200210224295 7274.510412893263 7365.163713937883 7673.806776699007 8626.499868332196 7911.363277360006 8554.587102982992 7289.979127936178 6740.447613717922 8118.8309256981975 7934.428367500584 0.9488018369489353 0.9168285446610943 0.9282538543174189 0.9671530728200809 1.0872238639983614 0.9970930369432721 1.0781604807250613 0.918778113593656 0.8495189951335113 1.0232408120228202 1.0 12.953910573119057 SPS(ph)PPDGSPAATPEIR ddPTM_A549_PD325901_60min_R1 1 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 S(0.011)PS(0.989)PPDGSPAATPEIR 210.08 3.9170999999999995e-46 46115000.0 7709.5 7135.7 7431.7 7359.8 7914.1 7580.1 6489.2 8381.5 7497.3 7728.4 9014.8 True False 8492.162764566066 7737.0504817413275 7936.059852442518 7814.398130681456 7358.2409181628245 7518.370178774148 6736.150057026495 8214.324407340444 7182.214553563051 7240.427505063 7906.036749525537 1.0741365153755078 0.9786256662929943 1.003797490938653 0.9884090320159996 0.9307117018655918 0.9509657514841866 0.8520261504515205 1.0389939570965703 0.9084468971123965 0.9158099986693735 1.0 12.948738945895382 -2.035007545003192 0.6984633120387377 0.9537562201324451 14.718028947629172 0.3547652508916834 0.04876308093169232 228.42644863142522 1.1964584707224413 0.007982508048119508 4909.86782382923 0.009225553994496271 2.035007545003192 13.764272727496726 SPS(ph)PPLPLSCSNSTR ddPTM_A549_MK2206_60min_R1 1 SPSPPLPLSCSNSTR 15 0 Q96HJ3-2;Q96HJ3 Q96HJ3-2 CCDC34 Coiled-coil domain-containing protein 34 1 S(0.203)PS(0.797)PPLPLSCSNSTR 86.641 4.9198999999999994e-05 5607900.0 1968.9 2492.2 2082.4 1699.3 3065.8 2778.8 2369.8 2093.7 3525.8 2950.5 3658.1 True False 2301.2021850166293 2619.042334953133 2377.7156328141277 2115.628576284476 2614.824881240701 3072.8507715818473 2800.3619848119415 2390.4883866873356 2727.2119295456428 2283.980000788755 2749.692811576102 0.8368942797277775 0.9524854281638532 0.8647204599743052 0.7694054286274308 0.9509516373001332 1.1175251135855113 1.0184272123135079 0.8693656166330547 0.9918242205326299 0.8306309676387437 1.0 11.42505473821929 -6.988412713077358 24.65865449533697 0.9965011879274733 0.8630049438085123 0.27240759068466025 0.08327958191399268 128.23935863103924 272901.0256544256 0.009503184750745306 0.01794901613056497 1.0270398311084094e-07 6.988412713077358 -0.133496244118961 SPS(ph)PPLPLSCSNSTR ddPTM_A549_PD325901_60min_R1 2 SPSPPLPLSCSNSTR 15 0 Q96HJ3-2;Q96HJ3 Q96HJ3-2 CCDC34 Coiled-coil domain-containing protein 34 1 S(0.037)PS(0.963)PPLPLSCSNSTR;S(0.017)PS(0.983)PPLPLSCSNSTR 108.63 3.6076999999999998e-06 19275400.0 8409.0 8404.4 8168.799999999999 8326.3 10704.3 8118.1 8660.7 9626.5 8383.3 9174.8 9892.400000000001 True False 9262.675489621388 9112.668283244364 8723.18389098489 8840.596640600692 9952.466895830266 8051.988885147479 8990.287677816892 9434.491905656843 8030.97905471105 8595.501562218837 8675.697513090297 1.067657727306125 1.0503672205600465 1.005473493955148 1.0190070166994165 1.1471661939358213 0.9281085322532583 1.0362610803629249 1.0874620618597688 0.9256868444979246 0.9907562532291545 1.0 13.082764037537169 -8.765080158582457 24.99946060705166 0.9649076773935548 1.040363116983033 0.24865055303589956 0.0541038403231462 88.1083865536945 604995.8120962887 0.009399711886966613 0.01020260315163731 1.7175913387045812e-09 8.765080158582457 0.0754554395894782 SPS(ph)PPLPTHIPPEPPRT(ph)PPFPAK ddPTM_A549_MK2206_60min_R1 2 SPSPPLPTHIPPEPPRTPPFPAK 23 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.419)PS(0.581)PPLPTHIPPEPPRT(1)PPFPAK;S(0.413)PS(0.584)PPLPT(0.004)HIPPEPPRT(1)PPFPAK 138.4 5.531e-22 15309800.0 5656.7 7231.5 6393.8 5621.7 9671.4 7565.299999999999 7344.1 7356.2 10514.7 8568.8 10381.6 True False 6611.412666963062 7599.552461766146 7300.536982850059 6999.016752367699 8248.749871626105 8365.855024560293 8678.427906429823 8398.963877417671 8133.137238525601 6633.10212870994 7803.562202416137 0.847230084859968 0.9738568444310183 0.9355390260860186 0.8969002323324424 1.0570492882176463 1.072055915946958 1.1121110694475929 1.076298703022728 1.0422339218373144 0.8500095157383638 1.0 12.929917126407059 -6.762400256331574 24.99983270212645 1.037946565345438 0.919283877452112 0.3855128246352888 0.07020327994121586 13.683484686859558 356029.87272092333 0.006788869946837422 0.013376506163665555 1.7282228529086798e-07 6.762400256331574 -0.11866268789332601 SPS(ph)PPLPTHIPPEPPRT(ph)PPFPAK ddPTM_A549_PD325901_60min_R1 4 SPSPPLPTHIPPEPPRTPPFPAK 23 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.4)PS(0.6)PPLPTHIPPEPPRT(1)PPFPAK;S(0.452)PS(0.543)PPLPT(0.004)HIPPEPPRT(1)PPFPAK;S(0.432)PS(0.565)PPLPT(0.004)HIPPEPPRT(1)PPFPAK;S(0.413)PS(0.527)PPLPT(0.06)HIPPEPPRT(1)PPFPAK 152.16 3.7082e-27 39934600.0 15821.1 17272.8 18471.8 18215.0 21694.7 19786.0 17341.5 21173.9 19912.2 20027.0 21774.3 True False 17427.246425121764 18728.439474896877 19725.407427956947 19340.099180733534 20170.93911465196 19624.8693760274 18001.440272132917 20751.56995389679 19075.35948054076 18762.491802170807 19096.19913866019 0.9126028849290937 0.9807417349864777 1.032949399235313 1.0127721773480864 1.0562803083581151 1.027684579194449 0.942671373576591 1.0866858793845162 0.9989087012568254 0.9825249341994033 1.0 14.220997895848194 -5.340760510345632 3.050734691015637 1.0097072069020134 0.9051686328382156 0.4007328832770406 0.0363061764398761 0.22677645936859056 3.281933171946421 0.004609856166246677 0.051046021542904274 4.562884647202259e-06 5.340760510345632 -0.10453857406379785 SPS(ph)PQGTK ddPTM_A549_MK2206_60min_R1 2 SPSPQGTK 8 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 S(0.082)PS(0.918)PQGTK;S(0.029)PS(0.971)PQGTK 91.54899999999999 0.0026074 49312000.0 7606.5 6539.6 4662.1 3867.2 6429.6 4991.6 4170.3 4594.3 6233.2 9690.4 10386.7 True False 8890.291238929856 6872.437707109986 5323.255883472313 4814.664173605204 5483.814357239618 5519.807798844087 4927.989528762442 5245.556094453662 4821.390152375032 7501.331909724913 7807.395731663299 1.1387012448818008 0.8802471327588095 0.6818222191407017 0.6166799197943924 0.702387139798707 0.7069973123634838 0.6311950486609414 0.6718701439943715 0.6175414079270548 0.960798218451112 1.0 12.930625681739603 -4.168704282208429 23.79925580743361 0.7808330109321515 50.071246056801726 0.0 0.17258934406731055 0.0 0.0 0.02529892054137333 0.0 6.78103081262853e-05 4.168704282208429 49.29041304586958 SPS(ph)PQGTK ddPTM_A549_PD325901_60min_R1 2 SPSPQGTK 8 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 S(0.174)PS(0.826)PQGTK;S(0.011)PS(0.989)PQGTK 108.31 0.00176 92737000.0 12127.5 11999.3 9120.4 9859.8 10863.599999999999 8863.099999999999 7613.5 8889.7 9857.0 10919.7 14780.900000000001 True False 13358.67487220636 13010.523122547018 9739.36518942055 10468.81745276951 10100.578213385434 8790.921852151443 7903.235908767059 8712.38795966526 9442.744568640843 10230.228278432334 12962.943003845008 1.030527933991839 1.0036704719513074 0.7513236142850975 0.8075957326715313 0.7791886618948681 0.6781578727565122 0.6096791374013477 0.6720995345795343 0.7284414168788661 0.7891902537408281 1.0 13.6621056730068 -5.745275412876394 19.20820269689012 0.8092134426719101 1.017103691154073 0.4105903269457457 0.10605757089126032 17.794767771742535 21138.197383189305 0.020052037106082356 0.0765612001740682 1.7977305019418875e-06 5.745275412876394 0.20789024848216286 SPS(ph)PRPNMPVR ddPTM_A549_PD325901_60min_R1 1 SPSPRPNMPVR 11 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 S(0.187)PS(0.813)PRPNMPVR 47.621 0.0072396 38273000.0 2346.8 2402.8 2485.0 2426.8 2564.5 2295.4 2010.5 2688.5 2754.9 2177.8 3020.9 True False 2585.0454083771515 2605.292388627333 2653.647043518932 2576.697924337313 2384.378367044712 2276.7070234374437 2087.0106776878138 2634.8757584125506 2639.1211334228146 2040.2933363343266 2649.348451062885 0.9757287333570879 0.983370982243624 1.0016225092831117 0.9725779647081056 0.8999866990271248 0.8593460111009775 0.7877448800102272 0.9945372634375338 0.9961396857268936 0.7701113590836972 1.0 11.37142188886793 -8.471292146627057 24.999929689130816 0.9980278803128539 0.9264399879087797 0.0 0.09037434739688589 401.31785009160046 194487.07883636068 0.010505333230045592 0.01270025988225015 3.3783749900940743e-09 8.471292146627057 -0.07158789240407426 SPS(ph)PSFR ddPTM_A549_MK2206_60min_R1 1 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 S(0.003)PS(0.997)PSFR 121.53 0.0064931 99552000.0 3236.8 3216.8 2910.0 2441.4 4285.9 3278.6 2491.4 2802.4 4407.8 4812.5 4715.1 True False 3783.0927078377904 3380.521379936299 3322.6817573420617 3039.5431095986123 3655.4497874973968 3625.5392758414587 2944.0551307960473 3199.6487819900613 3409.4403378102243 3725.3529075735933 3544.210539860167 1.0674006708379824 0.9538150575190361 0.9374955917469718 0.8576079427038028 1.0313861849870856 1.0229469257163544 0.830665982645659 0.9027818031702767 0.9619745496114742 1.0511093699643963 1.0 11.791248592784754 -9.87725037440815 1.2290026892527235 0.9932642520278275 0.9490089203361358 0.10915461161877704 0.07041898665624581 0.880666755843069 2.6852625527977545 0.020211663261190144 0.012752934391772053 1.3266294242467542e-10 9.87725037440815 -0.04425533169169171 SPS(ph)PSFR ddPTM_A549_PD325901_60min_R1 2 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 S(0.205)PS(0.715)PS(0.08)FR;S(0.041)PS(0.951)PS(0.008)FR 82.56299999999999 0.014906 206620000.0 10499.900000000001 10154.4 9367.900000000001 11863.9 11694.4 11844.6 10227.9 10295.4 11644.3 11879.3 12837.8 True False 11565.842118382156 11010.146924869903 10003.662027758954 12596.706158128172 10873.025687489833 11748.141504664616 10617.128331421636 10090.05017041494 11154.930565144015 11129.238970665974 11258.831985519255 1.0272683821250523 0.9779120017983035 0.8885168586426496 1.1188288602520802 0.9657330086703814 1.0434600604907058 0.9430044204476133 0.8961897809108826 0.9907715631151727 0.9884896572735112 1.0 13.458769546567652 -8.56615644505617 0.004865439149411225 1.1766397951211276 0.8007250731095452 0.0 0.06258303699290113 57038.686182102705 225.30944277487944 8697.907336769258 8707.478604091586 2.7154609074340876e-09 8.56615644505617 -0.3759147220115824 SPS(ph)PSPTPEAK ddPTM_A549_PD325901_60min_R1 1 SPSPSPTPEAK 11 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 S(0.163)PS(0.831)PS(0.005)PT(0.001)PEAK 85.973 0.00038185 8151000.0 5806.6 6632.7 6059.6 7128.4 8377.5 7942.5 6255.8 6902.0 7567.7 7655.6 8687.0 True False 6396.081757407005 7191.660906462676 6470.840895334935 7568.705078228984 7789.093300806041 7877.81891332748 6493.867892305116 6764.334195485745 7249.655886385646 7172.224109487128 7618.554071430128 0.8395401144939771 0.9439666423621882 0.84935288700002 0.993456895792329 1.0223847238960266 1.034030714944927 0.8523753761435351 0.8878763781243294 0.9515789765898146 0.941415397494289 1.0 12.895301498664235 SPS(ph)PVLR ddPTM_A549_MK2206_60min_R1 1 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.346)PS(0.654)PVLR 93.46700000000001 0.012145 151290000.0 3522.5 3713.8 3937.2 3006.4 4940.9 4068.8 3552.6 4150.0 5286.0 5024.9 5615.8 True False 4117.011883143421 3902.8165570776623 4495.5541632327 3742.968134962424 4214.100155170654 4499.357715349147 4198.061434400751 4738.275208841973 4088.729440007451 3889.7716000553855 4221.241871804783 0.9753082169118164 0.9245659631934385 1.0649837890740517 0.8866983339578516 0.9983081479690062 1.0658848395781348 0.9945086213706771 1.1224837033126778 0.9686081878694441 0.9214756505749153 1.0 12.043451780921911 -5.717566720733928 24.999810641378932 0.9983573641642179 0.949937111467167 0.08858666688502281 0.06394235648210393 254.18183067739216 144836.07440634875 0.007798099197898487 0.030201591515739694 1.9161666591168417e-06 5.717566720733928 -0.04842025269705097 SPS(ph)PVLR ddPTM_A549_PD325901_60min_R1 1 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.168)PS(0.832)PVLR 100.09 0.011304999999999999 159450000.0 3640.3 3585.3 3584.4 3238.5 3958.3 3403.3 3242.8 3452.5 3819.5 3817.4 3758.4 True False 4009.860576152779 3887.4458136114426 3827.6589387481918 3438.5347898328596 3680.2826633936797 3375.584653160519 3366.2065285282492 3383.6371790661465 3658.97969766904 3576.3687125184383 3296.1406264605753 1.216532008362338 1.1793931916630074 1.1612547438118153 1.0432002694997842 1.1165429756999172 1.0241021351037596 1.021256951692292 1.0265451515943134 1.1100799730131916 1.0850170298585757 1.0 11.68656207960111 -6.044111009860335 1.1843099424201393 1.048516084804538 1.221280396417746 0.7206387982696834 0.03689265880138019 0.29091231526590217 0.6633518714195699 0.006771612828956938 0.04342802009827492 9.034185217150165e-07 6.044111009860335 0.17276431161320804 SPS(ph)PVQGK ddPTM_A549_MK2206_60min_R1 1 SPSPVQGK 8 0 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.162)PS(0.838)PVQGK 110.38 0.0015989 157750000.0 7589.9 7776.4 8113.0 6281.2 9492.4 7995.5 7024.2 7037.4 10375.0 10680.0 10675.0 True False 8870.889564760897 8172.185544310069 9263.545394266714 7820.094281973787 8096.080534506245 8841.578503016643 8300.406217282487 8034.97300113362 8025.079065470545 8267.380582417863 8024.102884988085 1.1055303866251547 1.0184547308832523 1.1544649323474456 0.9745755250227451 1.008970180286798 1.1018775095167255 1.0344341711783538 1.0013546830469822 1.0001216560276522 1.0303183671641243 1.0 12.970124388955961 -5.794405816620737 0.26604501792405605 0.9929071242051883 1.1400106096231375 0.19945141695447088 0.04805602608821351 6.48622648776013 0.4295842744178293 0.024842804559432195 0.30245605207587645 1.6054403845697523e-06 5.794405816620737 0.14710348541794915 SPS(ph)TLLPK ddPTM_A549_MK2206_60min_R1 1 SPSTLLPK 8 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.118)PS(0.86)T(0.022)LLPK 90.906 0.0026236000000000002 2228100.0 915.23 1510.8 1260.0 1112.8 1846.8 1357.7 1067.5 1181.0 1945.4 1716.4 1503.0 True False 1069.6984487748343 1587.6932668514548 1438.6869464780063 1385.436049955491 1575.1381664411665 1501.3709128316802 1261.4509320561847 1348.4103666608123 1504.770006165436 1328.664047908429 1129.7636193102653 0.9468338601909473 1.4053322657183467 1.273440675454165 1.2263061283574672 1.3942192326947187 1.3289248185813292 1.1165618280630387 1.1935331812897583 1.3319334951537178 1.176054906706586 1.0 10.14180523347711 -10.884526935263562 0.9958595217617315 0.9912808423646247 1.2585823868020254 0.11979366818499937 0.1351528270277593 0.4915933919869082 0.8176139423031586 0.09786276884953539 0.020585652650888464 1.304587054680981e-11 10.884526935263562 0.26730154443740073 SPS(ph)TPAK ddPTM_A549_MK2206_60min_R1 1 SPSTPAK 7 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.021)PS(0.489)T(0.489)PAK 95.311 0.011911 24440000.0 7407.1 6618.8 4579.3 3665.1 6347.7 6225.2 5352.5 4924.2 5791.2 10297.0 10409.0 True False 8657.237393791807 6955.668648819439 5228.713598418039 4563.049664532592 5413.961738747341 6883.946532046673 6324.979966117779 5622.220429730034 4479.502446646072 7970.900548422917 7824.158026214609 1.1064752737337347 0.8889989984244538 0.6682781177092013 0.5832000899322624 0.6919545490528212 0.8798322463557375 0.8083911323015361 0.7185719422962766 0.5725219802102197 1.0187550560349947 1.0 12.933719793670768 -11.09472511831617 1.448900665429209 0.9990687724392828 0.7396124652060297 0.2618321432500814 0.14855097658862434 0.4591928034090797 1.7328207129595616 0.11344129330463186 0.02518642437141299 8.040348657627156e-12 11.09472511831617 -0.2594563072332531 SPS(ph)TPAK ddPTM_A549_PD325901_60min_R1 2 SPSTPAK 7 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.001)PS(0.499)T(0.499)PAK;S(0.001)PS(0.499)T(0.499)PAK 108.81 0.008856200000000002 70820000.0 19115.2 17289.2 14246.7 14952.4 15060.1 11305.5 9807.4 13081.2 15135.3 19006.3 24762.0 True False 21055.76103213351 18746.221560452672 15213.56673436667 15875.975788635751 14002.330530524501 11213.431756326585 10180.625973815202 12820.285203997115 14499.215975423536 17806.238974364554 21716.43097925093 0.9695774159322652 0.8632275523710061 0.7005555723637344 0.7310582389806377 0.6447804680199567 0.5163570278670797 0.4687983022413918 0.590349547595842 0.6676610898575775 0.8199431569293136 1.0 14.406499400204465 -10.534220709116882 0.9211983425462674 0.9930170455292616 0.6779379779474024 0.2388417302124194 0.14437265013648612 0.45342853596964694 0.7101402283385606 0.0897106742905953 0.027581082057475857 2.922666696697812e-11 10.534220709116882 -0.3150790675818592 SPS(ph)WTR ddPTM_A549_MK2206_60min_R1 1 SPSWTR 6 0 D3DX86;H3BLZ2;Q9H9R9;Q9H9R9-2;Q9H9R9-3 D3DX86 MGC3101;DBNDD1 Dysbindin domain-containing protein 1 1 S(0.365)PS(0.614)WT(0.021)R 64.265 0.058846 22460000.0 4515.6 3541.7 2790.6 2710.1 4994.4 4612.1 4147.3 4150.8 4858.9 5373.7 4688.3 True False 5277.722884179537 3721.957402176195 3186.3490419377154 3374.0746216610114 4259.730376041675 5100.149360735798 4900.810726479264 4739.188611291872 3758.3669080688983 4159.777437803264 3524.0657195025424 1.4976232863570265 1.0561543678310252 0.904168450748274 0.9574380531522256 1.2087545225016347 1.4472344634525534 1.3906695040781087 1.3448071030754944 1.0664860440228765 1.180391561593936 1.0 11.78302511366398 -8.928747229512288 7.775147629396482 1.029089752106541 1.2129106274233705 0.08478629036985497 0.18923804392775304 0.34625477941263677 32.609218963022265 0.03482218876793902 0.03690204764413193 1.1782915697913408e-09 8.928747229512288 0.18382087531682956 SPS(ph)YGR ddPTM_A549_MK2206_60min_R1 1 SPSYGR 6 0 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 S(0.178)PS(0.822)YGR 91.9 0.036943000000000004 59298000.0 5086.3 5189.4 4336.3 4439.8 7092.5 5576.5 4667.9 5273.8 7998.5 6428.3 6751.8 True False 5944.74309190415 5453.518294280471 4951.252544454425 5527.551199310197 6049.202645377935 6166.601528618885 5515.997007723717 6021.3773003351325 6186.8525209798645 4976.142565351753 5075.14171979977 1.1713452392298296 1.074554878537585 0.9755890215120471 1.0891422357222915 1.1919278277053897 1.2150599666135387 1.0868656112998831 1.186445154200087 1.2190501985083395 0.9804933221742775 1.0 12.309232393777165 -5.231904595718389 21.402888735385122 1.1116669964326684 1.1713458693712457 0.038823216115314585 0.08787795458489002 4908.782686463705 3556819.5627830597 0.013371382506063468 1.3922695448452689 5.862669394247275e-06 5.231904595718389 0.05967887293857732 SPSDLHIS(ph)PLAK ddPTM_A549_MK2206_60min_R1 2 SPSDLHISPLAK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 SPSDLHIS(0.999)PLAK;S(0.002)PS(0.002)DLHIS(0.996)PLAK 65.805 0.0017462 3595100.0 1117.51 646.02 1072.0900000000001 986.51 1519.5 1219.04 1158.22 1089.94 1779.72 1881.5700000000002 2013.25 True False 1306.1183675036484 678.8996586254808 1224.1284828965122 1228.2049942861172 1295.9835628694793 1348.0380036667389 1368.6535817574838 1244.4423328012579 1376.6162616288416 1456.5220301928828 1513.304462126675 0.863090277067006 0.44862066795957933 0.808910905592799 0.8116046869775946 0.856393141832285 0.890791005646224 0.904413894236517 0.8223344105206826 0.9096756773546132 0.9624778533633643 1.0 10.563486557617477 -4.728523469602129 0.18586135420676142 1.017263716993206 0.28351020147798356 0.416509114634776 0.10506860022663782 11.175146345612967 0.29240290132386826 0.11791877388843311 1.974753832771457 1.868428703227866e-05 4.728523469602129 -0.7337535155152224 SPSDLHIS(ph)PLAK ddPTM_A549_PD325901_60min_R1 2 SPSDLHISPLAK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 SPSDLHIS(1)PLAK;S(0.001)PS(0.001)DLHIS(0.999)PLAK 74.678 0.00040132 9992900.0 1517.5 1419.98 1473.01 1396.3600000000001 2062.6 1881.1 1690.17 1772.37 1603.76 1814.79 1970.16 True False 1671.5554828755446 1539.646698020243 1572.9773165287004 1482.6099858363484 1917.7300915837104 1865.7809452767167 1754.4903442465118 1737.0186899526323 1536.3595444256314 1700.2038496860005 1727.8428098732336 0.9674233520109282 0.8910803050036723 0.9103706121531419 0.8580699455786275 1.1098984702922186 1.0798325719303155 1.0154224297609764 1.0053105988733269 0.8891778439835909 0.9840037762525048 1.0 10.754756259263258 SPSDLLDAS(ph)AVSATSR ddPTM_A549_PD325901_60min_R1 1 SPSDLLDASAVSATSR 16 0 K7EJ05;K7EPP9;K7ELY2;X6R2W0;K7EIY4;Q5U8S2;O60499;K7EQ84;O60499-2 K7EJ05 STX10 Syntaxin-10 1 SPSDLLDAS(0.956)AVS(0.015)AT(0.015)S(0.015)R 62.376999999999995 0.0036598 1648500.0 1452.0 1219.5 1471.8 1409.3 1409.5 1535.3 1345.8 1713.3 1785.9 1351.1 1539.1 True False 1599.4059710940955 1322.271544835623 1571.6851986523795 1496.3492602474764 1310.5015825110243 1522.7970258270916 1397.0151554500171 1679.1268874421517 1710.844833634542 1265.7913154198313 1349.8004571587555 1.1849203062656712 0.9796051985483253 1.164383365198051 1.1085707167392704 0.9708854190711619 1.1281645503606383 1.0349790208181182 1.2439815667099472 1.2674798149318767 0.9377618067223372 1.0 10.398530432126885 SPSDS(ph)STASTPVAEQIER ddPTM_A549_PD325901_60min_R1 1 SPSDSSTASTPVAEQIER 18 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 S(0.021)PS(0.223)DS(0.755)STASTPVAEQIER 337.85 7.475499999999998e-196 20339000.0 4683.2 4505.5 3798.0 3742.6 5101.3 5236.3 5168.3 4932.2 5899.4 6424.1 7235.6 True False 5158.635016410376 4885.1942970536265 4055.7551192293386 3973.771901938695 4743.002286529615 5193.657308889735 5364.982484702277 4833.823401763952 5651.468733716122 6018.481229656234 6345.667070247478 0.8129381764444179 0.7698472426891925 0.6391377099257692 0.6262181513698165 0.7474395101450919 0.8184572640504421 0.8454560293364155 0.7617518139941488 0.8906027799998839 0.9484394883990528 1.0 12.631556115923505 -8.824006577605644 0.48195838663692 0.9940890510318459 0.7113666814516681 0.6800216132382263 0.062363050515893616 0.31976934884061503 0.17902121183344571 0.028524500960275933 0.025892997003135784 1.4996621222026437e-09 8.824006577605644 -0.2827223695801777 SPSDSS(ph)TAST(ph)PVAEQIER ddPTM_A549_PD325901_60min_R1 2 SPSDSSTASTPVAEQIER 18 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 2 S(0.043)PS(0.048)DS(0.375)S(0.41)T(0.179)AS(0.255)T(0.689)PVAEQIER;S(0.011)PS(0.016)DS(0.157)S(0.776)T(0.039)AS(0.183)T(0.817)PVAEQIER 79.013 0.00051512 7019100.0 1286.13 1552.9 1416.0700000000002 1348.99 1648.62 1529.69 1192.4499999999998 1392.87 1621.24 1714.48 1516.19 True False 1416.6969708011366 1683.7683329030249 1512.1730257206664 1432.3140485214235 1532.8266186302417 1517.232711807104 1237.829337283678 1365.088115164623 1553.1049208139682 1606.2274402050127 1329.7082419203002 1.0654194101671592 1.2662690053506838 1.1372216686698575 1.0771641502747586 1.1527540931961193 1.1410267786382897 0.9309029592055958 1.026607245205331 1.1680042823311747 1.2079547900563337 1.0 10.376894016020715 -7.581809917216808 24.99999618430147 1.0651118139618068 1.1435488347472131 0.15332354654874736 0.08550453842002717 107.6297627210692 45658.48635490819 0.013249287666161548 0.0196518708833333 2.6193291900394298e-08 7.581809917216808 0.07843702078540638 SPSDSSTAS(ph)TPVAEQIER ddPTM_A549_PD325901_60min_R1 1 SPSDSSTASTPVAEQIER 18 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 SPSDSSTAS(0.5)T(0.5)PVAEQIER 215.15 1.2110999999999997e-55 9822200.0 2725.9 2826.3 2539.2 2166.1 3286.1 3232.9 2596.0 2114.3 2777.6 2712.5 2607.0 True False 3002.6313612984827 3064.4822199007117 2711.5253814500074 2299.8950774299706 3055.295672429569 3206.572334264578 2694.792200585708 2072.1286278637376 2660.8671313641894 2541.232287081854 2286.355527134609 1.3132827881154385 1.340334949456131 1.1859596415646894 1.0059218919081803 1.3363169621562048 1.4024819395797279 1.178640928151264 0.9063020178933621 1.1638028730811343 1.111477308284889 1.0 11.158834044011831 -6.348426565955827 0.028303040185718453 5.23450698905683e-07 2.473673106440665 0.26395756373804813 0.13187351123672433 373.2275083083048 2.2609061270318724 84.87799310906075 113.8867762865835 4.483048466189045e-07 6.348426565955827 2.473672582989966 SPSDSSTAST(ph)PVAEQIER ddPTM_A549_MK2206_60min_R1 2 SPSDSSTASTPVAEQIER 18 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 SPSDSSTAS(0.023)T(0.977)PVAEQIER;SPSDSSTAS(0.031)T(0.969)PVAEQIER 164.01 6.935699999999998e-53 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPSDSSTAST(ph)PVAEQIER ddPTM_A549_PD325901_60min_R1 1 SPSDSSTASTPVAEQIER 18 0 Q16643;Q16643-3;Q16643-2;D6R9Q9 Q16643 DBN1 Drebrin 1 SPSDSSTAS(0.023)T(0.977)PVAEQIER 157.91 5.837399999999999e-41 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPSFGDPQLS(ph)PEAR ddPTM_A549_MK2206_60min_R1 2 SPSFGDPQLSPEAR 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 SPSFGDPQLS(1)PEAR;SPS(0.003)FGDPQLS(0.996)PEAR 66.24600000000001 0.0043048999999999995 10798700.0 2312.5699999999997 3184.3 2394.3999999999996 2106.1 3296.4 3079.2 2471.6 2956.8 3996.4 3795.7 4164.3 True False 2702.87527909183 3346.367268755023 2733.9619243229645 2622.0945945464223 2811.5039267146753 3405.038900192463 2920.657727091397 3375.9354548202277 3091.221780939419 2938.248733771862 3130.189381166828 0.8634861824508172 1.069062239137624 0.8734174170969288 0.8376792184915645 0.898189720925653 1.0878060352128538 0.9330610296820685 1.0785083724109352 0.98755104069362 0.9386808195856134 1.0 11.612034229680992 -7.222681667792619 24.968093361302504 1.001783648430433 0.911425715676656 0.30710483496957386 0.07160681518091605 515.9157059172919 332358.158652837 0.009590424718252371 0.016610958105960336 5.988503837709203e-08 7.222681667792619 -0.09035793275377701 SPSFGDPQLS(ph)PEAR ddPTM_A549_PD325901_60min_R1 2 SPSFGDPQLSPEAR 14 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 SPSFGDPQLS(1)PEAR;SPSFGDPQLS(1)PEAR 182.03 5.8545e-26 30005000.0 8361.1 7928.5 8250.7 9993.5 10462.0 8533.9 8364.400000000001 8112.0 8688.3 9707.7 10323.2 True False 9209.912716883506 8596.662520073169 8810.642117489602 10610.775798114772 9727.185211940643 8464.402747805527 8682.711819175303 7950.199796259113 8323.16096537712 9094.754165273558 9053.511844156505 1.0172751607795099 0.9495389930507238 0.9731739759280638 1.1720066180686985 1.074410171365596 0.9349303224547928 0.9590435146754096 0.8781343563813292 0.919329549532673 1.0045553948376036 1.0 13.144261804744556 -7.270317599215623 24.793464100827887 0.9521132144777715 1.0363296862101925 0.32515492802088264 0.06301294717269602 614.146186495742 1715072.137394987 0.01022632233065036 0.016491713515413092 5.366392090036659e-08 7.270317599215623 0.08421647173242097 SPSFGDPQLS(ph)PEARPR ddPTM_A549_MK2206_60min_R1 2 SPSFGDPQLSPEARPR 16 1 O95425-3;O95425-2 O95425-3 SVIL Supervillin 1 SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR 99.86 4.6476000000000004e-07 69964000.0 5355.3 6726.9 6398.4 5273.1 9049.9 7075.4 7034.9 7206.700000000001 10750.8 10316.2 9206.9 True False 6259.143715485578 7069.270477087002 7305.78933201974 6565.009736718452 7718.671698330039 7824.114131729595 8313.050268779445 8228.271794593118 8315.760965499825 7985.763255087933 6920.572632486819 0.9044256953685688 1.0214863498292266 1.0556625470159249 0.9486223301668318 1.1153226919542398 1.1305587770297123 1.2012084418789284 1.1889582309948814 1.2016001286459532 1.1539165440733699 1.0 12.756675701117935 -6.7740696227981845 24.524679836315716 1.116493710817048 0.9905528398186498 0.5483410395135091 0.06688759926927425 167.92241189741196 326062.5047055909 0.013031046932572095 0.02475045918792184 1.6824043291455895e-07 6.7740696227981845 -0.12594087099839824 SPSFGDPQLS(ph)PEARPR ddPTM_A549_PD325901_60min_R1 2 SPSFGDPQLSPEARPR 16 1 O95425-3;O95425-2 O95425-3 SVIL Supervillin 1 SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR 141.6 9.0038e-15 142606000.0 4261.5 4544.8 5105.9 4941.700000000001 4653.1 5572.0 5211.6 4763.6 5688.700000000001 5311.4 6362.6 True False 4694.124342849508 4927.806245976987 5452.417078270952 5246.937585585011 4326.282308323552 5526.623479390714 5409.9302898969445 4668.586261028093 5449.623721987137 4976.037297550803 5580.04053584452 0.8412348105172087 0.8831129835567012 0.9771285787703955 0.940304564434657 0.7753137778359855 0.990427120356802 0.9695145143023894 0.8366581265921788 0.9766279809224282 0.8917564783958504 1.0 12.446059887119677 -8.930420306986473 10.365195508171665 0.9897151320885176 0.9058537272870479 0.05474177487202758 0.06986756015485303 0.4050425180745006 57.92257298643958 0.010725289726262417 0.01139964893405883 1.173761047818596e-09 8.930420306986473 -0.08386140480146964 SPSFGDPQLS(ph)PEARPSTGKPK ddPTM_A549_MK2206_60min_R1 2 SPSFGDPQLSPEARPSTGKPK 21 2 O95425-4;O95425;A0A6I8PIX7 O95425-4 SVIL Supervillin 1 SPSFGDPQLS(0.997)PEARPS(0.001)T(0.001)GKPK;SPSFGDPQLS(1)PEARPSTGKPK 93.21 3.9441000000000005e-07 21484000.0 5834.4 7090.4 6778.1 6673.3 9373.8 6576.1 7179.1 6841.7 10172.0 9372.3 10336.6 True False 6819.104082615178 7451.271074452977 7739.336501525852 8308.258799575819 7994.9264373977685 7271.9785371381095 8483.449542224414 7811.531926827504 7868.058241346158 7255.090920654956 7769.736944352955 0.8776492861281878 0.9590120138968875 0.9960873266308974 1.069310178591601 1.0289828979613629 0.9359362600330225 1.0918580130811488 1.0053792017379592 1.0126543919951707 0.9337627480333109 1.0 12.923650039601146 -5.393648776506003 2.0052488475282835 1.0125339761926488 0.8589891805883101 0.4255762029420025 0.044955525854017596 0.3098903542933672 1.6307278329443093 0.005002871689625573 0.07830215188717944 4.039719619036035e-06 5.393648776506003 -0.15354479560433876 SPSFGDPQLS(ph)PEARPSTGKPK ddPTM_A549_PD325901_60min_R1 2 SPSFGDPQLSPEARPSTGKPK 21 2 O95425-4;O95425;A0A6I8PIX7 O95425-4 SVIL Supervillin 1 SPSFGDPQLS(0.996)PEARPS(0.002)T(0.002)GKPK;SPSFGDPQLS(0.998)PEARPS(0.001)T(0.001)GKPK 105.73 1.6555e-10 51098000.0 6771.700000000001 7095.700000000001 7124.799999999999 7446.799999999999 9087.9 8253.4 8782.8 8608.8 9599.7 8493.2 9527.3 True False 7459.157998937943 7693.6795413613145 7608.33177290289 7906.771923090119 8449.597255552997 8186.187046806046 9117.034260132566 8437.090730527052 9196.257992855995 7956.937902541422 8355.502498530705 0.8927240462497161 0.9207919622684847 0.9105774038414562 0.9462952018122796 1.0112614121100243 0.9797360539651048 1.0911413480799959 1.0097646110465164 1.1006229720442469 0.9522991470519733 1.0 13.028510878997457 -6.8159755564526625 1.0537883969051687 1.0473955419734238 0.9016354785022194 0.5527756355832927 0.043666190045858345 0.23172392879997145 0.4975024736833593 0.0066282283932712 0.02020853225354776 1.5276520371892615e-07 6.8159755564526625 -0.1457600634712044 SPSGDRPAVGHS(ph)GLKPLSGETPLSAYK ddPTM_A549_PD325901_60min_R1 1 SPSGDRPAVGHSGLKPLSGETPLSAYK 27 2 Q8IXZ2;A0A0J9YYE2 Q8IXZ2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 S(0.351)PS(0.057)GDRPAVGHS(0.577)GLKPLS(0.014)GET(0.002)PLSAYK 57.262 0.0006358 3852800.0 1824.0 1789.1 1712.2 2345.6 2936.2 2393.7 2030.5 2293.3 2322.8 2488.7 1758.1 True False 2009.171137242169 1939.8737358469966 1828.4001882950172 2490.482384755893 2729.971441340101 2374.2065008287063 2107.7717886322334 2247.558332440952 2225.180793754587 2331.563057275801 1541.8648455141365 1.303078634348271 1.2581347460452306 1.1858368738443708 1.6152403967193627 1.7705646829439121 1.539827895899024 1.3670275930893248 1.457688291538615 1.4431749969710204 1.512170839136253 1.0 10.590460593850063 -10.57293080196653 0.728792553638638 0.9794180020484659 1.4446567762068097 0.0 0.21710624257657324 0.5426712488373896 0.4821097255890221 0.1473335869755479 0.03456533648296647 2.6734323443617953e-11 10.57293080196653 0.4652387741583438 SPSGPVKS(ph)PPLSPVGT(ph)TPVK ddPTM_A549_PD325901_60min_R1 1 SPSGPVKSPPLSPVGTTPVK 20 1 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 2 S(0.232)PS(0.335)GPVKS(0.432)PPLS(0.004)PVGT(0.53)T(0.467)PVK 63.138000000000005 0.0010815999999999998 3867500.0 2490.5 2797.3 1922.5 2767.7 2862.9 3069.5 2789.6 3063.5 3130.2 2899.0 2960.1 True False 2743.3337265908026 3033.038288125205 2052.972410931648 2938.6545430972396 2661.8197804688293 3044.5030096894825 2895.7597545276926 3002.3960892307437 2998.648579563719 2715.956645253566 2596.0264656199283 1.0567433587144488 1.1683387393359714 0.7908133596170409 1.1319817351690566 1.0253438536625972 1.1727549969189002 1.115458487375701 1.1565352391404742 1.1550916831071847 1.0461975951408486 1.0 11.342089375866626 SPSGPVKS(ph)PPLSPVGTTPVK ddPTM_A549_MK2206_60min_R1 2 SPSGPVKSPPLSPVGTTPVK 20 1 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 1 S(0.249)PS(0.042)GPVKS(0.426)PPLS(0.282)PVGT(0.001)TPVK;S(0.012)PS(0.049)GPVKS(0.861)PPLS(0.072)PVGT(0.006)TPVK 86.73200000000001 1.9639e-06 44106000.0 8270.8 8035.7 7803.1 7552.1 9288.5 7211.700000000001 7278.4 6884.0 10916.0 9614.9 11357.1 True False 9666.708838354181 8444.682806750223 8909.696914335338 9402.364839026657 7922.173954401548 7974.837307260971 8600.791066864389 7859.828081365825 8443.543429270021 7442.887412161938 8536.818629985772 1.1323549506369557 0.989207241335558 1.0436788340611833 1.1013897854173256 0.9280007339707007 0.9341697010229515 1.0074937092670462 0.9206975598331207 0.9890737750491595 0.8718572731554382 1.0 13.059482813307081 -6.75624799354476 24.999992987449765 0.9814764236569221 1.0594841760231775 0.4458778035702705 0.055710818429983405 98.87641599781217 476151.36129490036 0.006320310698384923 0.01284892303694121 1.752879275944906e-07 6.75624799354476 0.07800775236625535 SPSGPVKS(ph)PPLSPVGTTPVK ddPTM_A549_PD325901_60min_R1 2 SPSGPVKSPPLSPVGTTPVK 20 1 Q9BVC5;C9J4K0;Q9BVC5-2 Q9BVC5 C2orf49 Ashwin 1 SPSGPVKS(0.824)PPLS(0.176)PVGTTPVK;SPS(0.004)GPVKS(0.904)PPLS(0.091)PVGT(0.001)TPVK 137.32 8.187e-18 72767000.0 12971.9 14510.6 14362.3 12691.5 15742.2 13960.9 15944.7 16755.4 16791.9 16012.099999999999 16096.0 True False 14288.797738591933 15733.459186955131 15337.012045525944 13475.425130512196 14636.522179641757 13847.207059121643 16551.484283774622 16421.200402642975 16086.194838405223 15001.093273357917 14116.294040950768 1.012220183083516 1.114560177147985 1.0864758130592862 0.9546007678375472 1.0368530251057275 0.9809378452270465 1.172509175266502 1.1632798491591185 1.1395480139291414 1.0626792860676026 1.0 13.785073766281801 -7.729976647156323 24.9999673286013 1.083693528651923 1.034065185550849 0.2310457516058978 0.06298381355164591 406.7213981671434 323176.1158716084 0.011911700768003021 0.017667032346632618 1.862187267336374e-08 7.729976647156323 -0.049628343101074 SPSLS(ph)PSPPS(ph)PLEK ddPTM_A549_MK2206_60min_R1 1 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.01)PS(0.012)LS(0.976)PS(0.015)PPS(0.986)PLEK 105.46 2.4531e-05 3305400.0 2425.7 3082.8 2644.0 1868.4 4215.6 2706.7 2420.6 2869.1 4203.7 4012.9 4591.7 True False 2835.0988573288823 3239.701352296575 3018.9589575300392 2326.158083875662 3595.4908243715504 2993.121197437953 2860.391687246091 3275.8037112502416 3251.5686619294956 3106.383102919911 3451.4541655269113 0.821421557801874 0.9386482325782213 0.8746918871713176 0.6739646457163782 1.0417321661933905 0.8672058366972439 0.8287497240483891 0.9491082755694499 0.9420865832164685 0.9000215427880901 1.0 11.75298861043269 -8.824497359718075 0.48734245509667123 0.9961255757524461 0.8556168611843517 0.1154693609652171 0.08943475533457189 0.7873325187922156 0.44850317870944767 0.034863779578756485 0.031698295791185514 1.4979683598765949e-09 8.824497359718075 -0.14050871456809444 SPSLS(ph)PSPPS(ph)PLEK ddPTM_A549_PD325901_60min_R1 2 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.009)PS(0.015)LS(0.931)PS(0.108)PPS(0.938)PLEK;S(0.069)PS(0.021)LS(0.907)PS(0.19)PPS(0.813)PLEK 115.26 4.6414e-06 12191100.0 4470.5 4529.0 4222.1 4346.6 5870.1 5013.3 5367.4 5985.5 5701.9 5866.0 6494.2 True False 4924.341868991839 4910.674724526882 4508.637095549815 4615.079610155167 5457.80442674563 4972.473346954318 5571.659344153978 5866.114506966085 5462.268971891373 5495.619758902177 5695.454570125651 0.864609103340315 0.8622094451046678 0.791620236811115 0.8103092656313384 0.9582737180230413 0.8730599613657557 0.9782642062284167 1.0299642345907905 0.959057596656568 0.9649132815014156 1.0 12.475595276708637 -7.273273479603301 1.1503417592399132 0.9844367709099019 0.8342582416709224 0.705546110377154 0.04137424524618318 0.18711120225778616 0.4876988886137901 0.00680854029495967 0.014506029987820664 5.329991548604769e-08 7.273273479603301 -0.15017852923897945 SPSLS(ph)PSPPSPLEK ddPTM_A549_MK2206_60min_R1 2 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.002)PS(0.006)LS(0.819)PS(0.168)PPS(0.005)PLEK;SPS(0.001)LS(0.891)PS(0.097)PPS(0.01)PLEK 104.17 2.3933000000000003e-05 4267900.0 2694.2 3817.2 3519.8999999999996 3816.3 3925.6 3406.3 3086.6000000000004 3080.4 5992.4 5026.8 5552.9 True False 3148.915093134139 4011.4791754205503 4019.0747483396267 4751.29367132022 3348.149440210876 3766.7524050810553 3647.395266402454 3517.0561333293535 4635.130967896452 3891.2423887357763 4173.9616777564715 0.7544187839373502 0.9610723540654891 0.9628921055403419 1.1383175117875226 0.8021514567451721 0.9024405818468622 0.8738449339005312 0.8426182137876722 1.1104871883701293 0.93226595957329 1.0 12.027201639456793 -8.764134895827086 24.999021875451938 1.0521745065258294 0.9117995582553614 0.15175205540675474 0.10442696587294192 66.29030192596426 614793.6870442048 0.01736818206570133 0.018902834381535838 1.7213338299548612e-09 8.764134895827086 -0.14037494827046804 SPSLSPS(ph)PPSPLEK ddPTM_A549_PD325901_60min_R1 1 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.047)PS(0.059)LS(0.347)PS(0.546)PPS(0.001)PLEK 57.803999999999995 0.011364 5512300.0 2579.7 3053.7 3454.8 3479.1 3885.6 3548.1 3836.3 3530.1 3168.0 2936.4 3535.3 True False 2841.589244925231 3311.046015961081 3689.263503400082 3693.996105390617 3612.6888605922923 3519.2054499688074 3982.2924958039116 3459.689386190124 3034.859977016761 2750.9952028708403 3100.480512113152 0.916499630887384 1.0679138291710844 1.1899005618602134 1.1914269710642207 1.1652028924155506 1.1350516270686928 1.2844113937325654 1.1158558722345107 0.9788353660537389 0.8872802754679733 1.0 11.598276106200766 -8.708274540252376 5.3407885868640035 0.989922176216947 1.1422254739587332 0.41242365401507874 0.0919430506169846 0.15030520664883273 9.103619628339873 0.014944961913675052 0.016803361201996176 1.9576067766657763e-09 8.708274540252376 0.1523032977417862 SPSLSPSPPS(ph)PLEK ddPTM_A549_MK2206_60min_R1 5 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPSLSPS(0.006)PPS(0.994)PLEK;SPSLSPS(0.007)PPS(0.993)PLEK;SPSLSPS(0.004)PPS(0.996)PLEK;SPSLSPSPPS(1)PLEK;S(0.001)PS(0.001)LS(0.003)PS(0.02)PPS(0.974)PLEK 276.36 4.610999999999998e-99 543650300.0 45561.5 50116.799999999996 47381.700000000004 42563.5 63541.100000000006 46584.700000000004 46667.5 46971.0 67790.90000000001 66122.2 64933.1 True False 53251.16732827221 52667.531053839644 54101.13753328329 52991.55941074815 54194.288362386214 51514.26203357882 55146.38067609556 53629.28309265457 52436.3693898224 51185.1490961377 48808.4192076084 1.0910242165755548 1.0790665198521667 1.1084386343913766 1.08570529984482 1.1103471335932602 1.0554380344600185 1.1298538565965108 1.0987711538974547 1.0743304176023891 1.0486950802159725 1.0 15.574842406464915 -10.1449066831616 0.6351888788406569 0.9988806611378718 1.0952296022854395 0.5424346249147048 0.023018343222056804 0.2582002675964934 0.1973058551526838 0.012325697137065343 0.004085916835463703 7.16297304452574e-11 10.1449066831616 0.09634894114756776 SPSLSPSPPS(ph)PLEK ddPTM_A549_PD325901_60min_R1 5 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPSLSPS(0.043)PPS(0.957)PLEK;SPSLS(0.001)PS(0.06)PPS(0.938)PLEK;SPSLSPS(0.066)PPS(0.934)PLEK;SPSLS(0.004)PS(0.034)PPS(0.962)PLEK;SPSLS(0.001)PS(0.024)PPS(0.975)PLEK 241.39 1.5296999999999997e-57 714099700.0 41466.75 40608.68 39696.420000000006 42174.99 51067.4 45329.92 43115.560000000005 50511.6 55098.6 60583.2 59900.700000000004 True False 45676.423933792044 44030.91597977486 42390.457775165305 44780.04334594812 47480.60199696594 44960.768160607055 44756.34622953973 49504.106512416394 52782.99745254284 56757.96641280639 52533.2936418228 0.8694757318133988 0.8381525871951225 0.8069255673209383 0.8524126366654811 0.9038192488118751 0.8558528324371594 0.8519615490833858 0.9423377648837382 1.004753248719232 1.080418958685283 1.0 15.680944418482653 -8.452101436299117 2.4970225799735863 1.002439077184415 0.8528884003981209 0.8453028239279212 0.03231388041167921 0.06164159353456478 0.7571744904605148 0.004062607657724097 0.00488144297874179 3.5310068794690195e-09 8.452101436299117 -0.14955067678629408 SPSLSPSPPS(ph)PLEKTPLGER ddPTM_A549_MK2206_60min_R1 2 SPSLSPSPPSPLEKTPLGER 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPSLSPSPPS(1)PLEKTPLGER;SPSLSPSPPS(1)PLEKTPLGER 170.59 6.769800000000001e-35 124729000.0 7152.200000000001 8537.1 9342.3 6377.7 8897.3 5539.7 5483.799999999999 5472.1 10777.5 12339.8 12731.9 True False 8359.316505498477 8971.601925097659 10667.17861911228 7940.236786305831 7588.518956182043 6125.907377044752 6480.135476543048 6247.786932603412 8336.413458130968 9552.2306096367 9570.217847436044 0.8734719145121675 0.9374501258089166 1.1146223408038847 0.8296819270872814 0.7929306393182138 0.6401011423878865 0.6771147302858043 0.6528364382298002 0.8710787560979477 0.9981204986045157 1.0 13.224336049899883 SPSLSPSPPS(ph)PLEKTPLGER ddPTM_A549_PD325901_60min_R1 2 SPSLSPSPPSPLEKTPLGER 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPSLSPS(0.009)PPS(0.978)PLEKT(0.012)PLGER;SPSLSPS(0.006)PPS(0.985)PLEKT(0.009)PLGER 105.73 3.2330000000000006e-10 202227000.0 16272.4 16567.0 18867.0 19326.0 20946.6 21555.6 20472.5 21786.0 21329.4 21990.0 22291.2 True False 17924.36206889225 17963.15923189155 20147.428076487595 20519.72312746946 19475.383077847047 21380.058340336403 21251.592190481853 21351.461139213625 20432.999492986513 20601.547647163126 19549.523715559262 0.9168695017682931 0.9188540597331718 1.0305840883710362 1.0496277774347018 0.9962075476215716 1.093635765833018 1.0870644471797506 1.092172957759591 1.0451916778271229 1.0538132768301955 1.0 14.254845839175635 -5.7667424652311405 6.09909957398364 1.0364897040698062 0.9166338622124236 0.6841273445530212 0.03361767625745089 0.07359870913994794 10.484858515241058 0.005411083847753714 0.019026288423069523 1.7110296475704495e-06 5.7667424652311405 -0.11985584185738263 SPSPGGPQLS(ph)PQLPR ddPTM_A549_MK2206_60min_R1 2 SPSPGGPQLSPQLPR 15 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 SPSPGGPQLS(1)PQLPR;SPSPGGPQLS(1)PQLPR 112.67 1.6612e-06 26085000.0 4889.8 6708.9 5069.7 4567.5 6183.5 5401.0 4684.700000000001 4858.6 8266.3 7288.4 8992.3 True False 5715.078695867907 7050.3543539712255 5788.659692507576 5686.537705042864 5273.915341232917 5972.530235106359 5535.849350260994 5547.321428838462 6393.996248568595 5641.945377986364 6759.263735145513 0.8455179321013538 1.0430654328979878 0.8564038805600709 0.8412954321452356 0.7802499721693993 0.8836066277531902 0.8190018272961823 0.8206990651947154 0.9459604624276352 0.8346982155246387 1.0 12.722650391598012 -8.95131436195645 3.7269786805385396 0.9777289865832699 0.8632488744451214 0.03226238114369817 0.07724877801817229 0.17432295921923527 4.72410499998544 0.0121475805025837 0.01255090467937317 1.11862787697419e-09 8.95131436195645 -0.11448011213814846 SPSPGGPQLS(ph)PQLPR ddPTM_A549_PD325901_60min_R1 2 SPSPGGPQLSPQLPR 15 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 SPS(0.002)PGGPQLS(0.997)PQLPR;SPSPGGPQLS(1)PQLPR 105.89 4.9344e-06 40631000.0 8856.7 8543.5 9380.6 8677.3 10373.099999999999 9028.3 9560.8 10077.7 9853.8 10744.400000000001 10904.599999999999 True False 9755.825664042059 9263.490728415862 10017.223926130264 9213.27711342186 9644.52924125229 8954.77651812333 9924.641475870501 9876.692367697295 9439.679053512546 10065.99675034922 9563.40332995476 1.020120696309502 0.9686395531808741 1.0474538802263034 0.963388952190668 1.0084829540801052 0.9363587636291495 1.0377729698782296 1.0327591576903634 0.9870627357046962 1.0525538245177033 1.0 13.22330840637116 SPSPPDGS(ph)PAATPEIR ddPTM_A549_PD325901_60min_R1 1 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-9;O00499-10;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 SPSPPDGS(0.97)PAAT(0.03)PEIR 138.07 1.1323999999999999e-10 25363000.0 6598.1 6709.7 7191.2 6813.2 7866.1 7928.7 7373.0 7601.3 7438.2 7344.4 9715.5 True False 7267.934254735504 7275.149966694194 7679.238076198531 7234.035890100126 7313.612272571818 7864.131295952108 7653.583549660406 7449.68610839551 7125.598321037267 6880.673330596857 8520.55509162881 0.8529883530564847 0.8538352124313837 0.9012603044774808 0.8490099309618161 0.8583492734830414 0.9229599728400772 0.8982494059782352 0.8743193404986728 0.8362833459099341 0.8075381540994803 1.0 13.056731705941093 -10.859026056985297 1.0126193403311436 1.0029206556145587 0.8710186930127756 0.0 0.06168323606161943 0.21749962106115056 0.38133272155682013 0.02128397337287943 0.004731056563269234 1.3834833696571366e-11 10.859026056985297 -0.1319019626017831 SPSPS(ph)VR ddPTM_A549_MK2206_60min_R1 1 SPSPSVR 7 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.327)PS(0.178)PS(0.495)VR 52.867 0.046284 75922000.0 4129.6 4527.0 4657.0 4025.5 4963.8 3935.2 3203.0 3762.0 5154.3 5915.2 6239.9 True False 4826.575520973476 4757.404963619625 5317.432626784188 5011.747680711562 4233.631595506101 4351.620252025653 3784.94363969645 4295.27502064181 3986.859279725766 4578.95221171518 4690.3606175210425 1.0290414564167192 1.0142940706623145 1.1336937733360397 1.0685207576555977 0.9026239005357476 0.9277794623658551 0.8069621823016404 0.9157664774424011 0.8500112475003911 0.9762473688292342 1.0 12.195483133012262 -6.759643517308053 24.999459910198215 0.9155789696316735 1.0631884542480314 0.6150774364129922 0.057030403401854765 30.142603979481052 419590.1830537735 0.009874158485749924 0.019750292124783023 1.7392278564088522e-07 6.759643517308053 0.14760948461635792 SPSSLSANIISS(ph)PKGS(ph)PSSSR ddPTM_A549_MK2206_60min_R1 1 SPSSLSANIISSPKGSPSSSR 21 1 K7EQL6;Q8NFA0 K7EQL6 USP32 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 32 2 SPSSLSANIIS(0.475)S(0.526)PKGS(0.92)PS(0.024)S(0.026)S(0.029)R 68.23100000000001 0.00029034 3248700.0 1415.1 1394.6 2072.9 1580.8 2402.3 1697.1 1287.7 1902.7 2460.0 2075.0 2403.4 True False 1653.9342841266855 1465.5791831817842 2366.8683899636962 1968.0960709648098 2048.9248523075685 1876.6859955561927 1521.658421741217 2172.413551774368 1902.8139278127735 1606.2560588499118 1806.5694495344599 0.9155110447333716 0.8112498434862018 1.3101452537978109 1.08941069022947 1.1341522756490552 1.0388119848034634 0.842291682798764 1.202507632537561 1.0532747181699076 0.889119463004222 1.0 10.819037001692646 -10.636517079435428 1.1277472417254948 1.0022150238460257 1.0472070354579661 0.038146672387650016 0.14486682917017119 2.3426228821169537 5.657163936275249 0.07309378594677905 0.024003495930016588 2.309313639094481e-11 10.636517079435428 0.04499201161194044 SPSSSVGS(ph)PPVLYMQPSPL ddPTM_A549_MK2206_60min_R1 1 SPSSSVGSPPVLYMQPSPL 19 0 F5H148;Q9NYV6-3;Q9NYV6;Q9NYV6-4 F5H148 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 1 S(0.019)PS(0.019)S(0.019)S(0.019)VGS(0.921)PPVLY(0.002)MQPSPL 61.097 0.00098812 1096700.0 473.19 664.88 578.49 603.21 770.73 629.52 686.15 637.3 966.85 1069.2 932.89 True False 553.0529036152265 698.7195520679076 660.5285806889381 750.9964770791256 657.3566379798573 696.1353885584437 810.8145733305399 727.6392266493951 747.8600187421871 827.6669774083497 701.2276665458112 0.7886923605560499 0.9964232522509295 0.941960239450686 1.0709738262017976 0.9374368259283623 0.9927380532310545 1.1562786410361483 1.0376647433688477 1.066501015891291 1.180311355205604 1.0 9.453739107721905 -4.359496592930071 0.8574524631679509 1.0347574525096086 1.0275215597826977e-12 0.510991102438419 0.0721866827486879 4.73495388207952 0.8222569548890051 0.008720033483849378 6.69202956661119 4.370221075255035e-05 4.359496592930071 -1.034757452508581 SPSSSVGS(ph)PPVLYMQPSPL ddPTM_A549_PD325901_60min_R1 1 SPSSSVGSPPVLYMQPSPL 19 0 F5H148;Q9NYV6-3;Q9NYV6;Q9NYV6-4 F5H148 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 1 S(0.079)PS(0.079)S(0.079)S(0.073)VGS(0.688)PPVLY(0.001)MQPSPL 52.026 0.0033079 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPST(ph)PAK ddPTM_A549_MK2206_60min_R1 1 SPSTPAK 7 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.008)PS(0.451)T(0.542)PAK 82.749 0.015707 20568000.0 10681.0 8508.8 6263.1 4952.9 7597.6 7780.9 7123.0 7945.4 7744.2 14666.0 15039.0 True False 12483.691674621681 8941.86157597673 7151.301757528883 6166.360722344127 6480.0031044798625 8604.269673456596 8417.156898394573 9071.684781766993 5990.151064946217 11352.940414020633 11304.40124471529 1.1043213527525573 0.7910070938217071 0.6326121660686854 0.5454831785298533 0.5732283350707502 0.7611433358736286 0.7445911301431839 0.8024914000649018 0.5298954748042547 1.0042938293019308 1.0 13.464596959064245 -11.035073250006599 1.331036946262552 0.999936973164327 0.6937277071039182 0.31632906866236554 0.15517070706101027 0.42229516976422693 1.3338020252627565 0.11563675088298636 0.025970470131250565 9.224158353449839e-12 11.035073250006599 -0.30620926606040877 SPST(ph)PAKSPK ddPTM_A549_MK2206_60min_R1 1 SPSTPAKSPK 10 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.004)PS(0.018)T(0.979)PAKSPK 91.85799999999999 0.00025035 56236000.0 2801.4 3007.6 2967.7 2395.2 4268.9 2518.0 2728.3 2260.9 4165.1 4807.0 6250.7 True False 3274.2078323457704 3160.673993501742 3388.564484970457 2982.024107524614 3640.9504649776336 2784.4530886868747 3223.996794312776 2581.38949871586 3221.7115002979635 3721.095361393508 4698.478679456205 0.6968655294025347 0.6727015719623429 0.7212046102894405 0.6346786504668676 0.7749211422193857 0.5926286525171894 0.6861788707075535 0.5494096440200568 0.6856924805011224 0.7919787691415431 1.0 12.197977986794228 -10.443827855705951 0.7777324501877518 1.0017074163896325 0.667328159054511 0.4732396485735022 0.0827866988536717 0.20780094008054664 0.22642871969513675 0.040010007820811634 0.011612244971948942 3.5989195974138474e-11 10.443827855705951 -0.3343792573351214 SPST(ph)PAKSPK ddPTM_A549_PD325901_60min_R1 1 SPSTPAKSPK 10 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.229)PS(0.229)T(0.271)PAKS(0.271)PK 54.7 0.0073893 87406000.0 5749.0 5347.2 4825.3 5311.4 5396.0 4824.9 4998.9 5482.1 5504.8 6310.3 8105.0 True False 6332.634247809888 5797.827310000033 5152.7738748860775 5639.473114935387 5017.003575189424 4785.607614090498 5189.135875003039 5372.755214875748 5273.452399457658 5911.8665810774655 7108.136381828159 0.8908993732870925 0.8156606737065554 0.7249120723202589 0.793382795714586 0.7058113837004192 0.6732577087750918 0.7300276185286744 0.7558598943896341 0.7418895918962892 0.8317041575329169 1.0 12.795255646881179 -10.634573974641395 0.7982541747710317 1.0083666614797138 0.7547984836489552 0.32190157077898596 0.07392688192431252 0.30362280156924404 0.32742113745356327 0.047614008732491206 0.01130233255668512 2.3196690359480038e-11 10.634573974641395 -0.2535681778307586 SPSTPAKS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SPSTPAKSPK 10 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 S(0.029)PS(0.009)T(0.009)PAKS(0.953)PK 50.145 0.0077396 62766000.0 2855.9 3094.1 2814.7 2772.6 3087.9 1828.7 2117.5 2155.0 3085.0 4129.3 5667.5 True False 3337.9060999487006 3251.57647403037 3213.8667843267012 3451.8871244667416 2633.674000516394 2022.2118202071838 2502.222340636038 2460.4778494107127 2386.2524257326877 3196.4882620765984 4260.103334957372 0.7835270268114519 0.7632623479690561 0.7544105228515215 0.8102824868451888 0.6182183373124087 0.47468609590133776 0.587361888643266 0.5775629499924638 0.5601395642569702 0.7503311564879174 1.0 12.056672710188893 -10.82985054262172 1.0734630535933893 1.0001883934170375 0.6524925561562349 0.2350134146962235 0.12461392199312737 0.3129707412547288 0.6395952459063627 0.08145492787744738 0.020033664275249895 1.4796174936570032e-11 10.82985054262172 -0.34769583726080255 SPSTPAKS(ph)PK ddPTM_A549_PD325901_60min_R1 3 SPSTPAKSPK 10 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 SPSTPAKS(0.999)PK;SPST(0.004)PAKS(0.996)PK;SPS(0.002)T(0.002)PAKS(0.996)PK 80.469 0.00033096 139560600.0 6722.76 7641.5 7042.8 7453.23 8802.8 8548.5 7568.0 9144.4 8507.8 9578.8 12011.6 True False 7405.249646165665 8285.476022846582 7520.76675979683 7913.599089586533 8184.521696011382 8478.883850246139 7856.004381368499 8962.00776835698 8150.24675267146 8973.992933271766 10534.249347805928 0.7029688971343772 0.7865274258551967 0.7139347580910693 0.7512257236662788 0.7769439877285659 0.8048873318165873 0.7457583470819159 0.8507495382405758 0.7736903203614591 0.8518872714115949 1.0 13.362799893440606 -14.999999999999996 0.20156806626988436 2.1254127470893502 0.7276660757222932 0.4856035805676462 0.05667367935018922 10.285595154843108 0.12150088025457503 4.553144286789199 0.02659818766938219 1.0000000000000082e-15 14.999999999999996 -1.397746671367057 SPSVPKS(ph)PTPK ddPTM_A549_MK2206_60min_R1 5 SPSVPKSPTPK 11 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 S(0.001)PSVPKS(0.792)PT(0.206)PK;S(0.004)PS(0.003)VPKS(0.744)PT(0.249)PK;SPSVPKS(0.988)PT(0.012)PK;SPSVPKS(0.994)PT(0.006)PK;SPS(0.003)VPKS(0.984)PT(0.012)PK 97.911 8.1622e-05 148904400.0 17441.18 18230.829999999998 18383.389999999996 16184.25 26864.71 19637.88 18153.21 20265.139999999996 27944.859999999997 22854.37 22978.85 True False 20384.82478808895 19158.701376829165 20990.431130963723 20149.391976538587 22912.94674646614 21715.947427030267 21451.413278043696 23137.785654388394 21615.393828771583 17691.55194395068 17272.567361003126 1.180184992887188 1.1091982434576824 1.2152467373411173 1.1665545460271625 1.326551303438393 1.2572507012512288 1.2419354245203462 1.339568413357436 1.2514291232450716 1.0242572267451977 1.0 14.076194917755144 -10.624496258569318 0.9244614337212463 1.0013415770143077 1.232185496866731 0.6336980115788398 0.06409005995158616 0.30037893081405465 0.4618487634912336 0.045179266311395315 0.012538784729075568 2.3741258756522857e-11 10.624496258569318 0.23084391985242325 SPSVPKS(ph)PTPK ddPTM_A549_PD325901_60min_R1 2 SPSVPKSPTPK 11 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 SPSVPKS(0.985)PT(0.015)PK;S(0.035)PS(0.005)VPKS(0.681)PT(0.279)PK 66.262 0.0017651 135530000.0 3772.5 3549.5 3788.3 3630.8 3784.3 3488.1 3536.4 3836.7 3691.7 4162.6 3868.9 True False 4155.481422832285 3848.628821971332 4045.3968188984977 3855.0662698549163 3518.5038231262665 3459.694070075871 3670.979637192331 3760.1740086670766 3536.550687232568 3899.772725606242 3393.0498269777872 1.22470391969858 1.1342682890688145 1.1922597737097662 1.1361655343825736 1.0369738148703291 1.0196413982984283 1.0819115027444492 1.108198877237323 1.0422925885478664 1.149341425698955 1.0 11.728366900860678 -2.000000000013118 0.199197493317525 0.9994524534308947 2.040070582107529 0.35028569694729395 0.05598930351436328 18.155284332394007 0.2013589247339506 0.031267024197884116 5.964808030924933 0.009999999999697948 2.000000000013118 1.040618128676634 SPSVPKS(ph)PTPKS(ph)PPSR ddPTM_A549_PD325901_60min_R1 2 SPSVPKSPTPKSPPSR 16 2 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 S(0.469)PS(0.024)VPKS(0.477)PT(0.155)PKS(0.606)PPS(0.268)R;S(0.101)PS(0.125)VPKS(0.666)PT(0.394)PKS(0.622)PPS(0.092)R 74.36399999999999 0.0004544 162960000.0 7074.1 6465.7 6528.5 6008.2 8081.0 6759.0 6737.8 7814.0 7865.0 8348.6 7596.5 True False 7792.257424322823 7010.58723037612 6971.5632690596985 6379.3128683877685 7513.418437936567 6703.956944939308 6994.210666065636 7658.143640035586 7534.461401274247 7821.46797121901 6662.178658181073 1.1696260073653275 1.0522964918941653 1.046438954395002 0.9575415484473764 1.1277719832250643 1.0062709646351096 1.0498383524249733 1.149495387763503 1.130930554079636 1.1740105410734285 1.0 12.701778327628992 -11.090772749302745 1.4561958142103166 1.000467767098423 1.0799169000113835 0.0 0.07970193249390599 0.5794302126226489 2.216378724789776 0.04379325592840642 0.009840216391745827 8.113855156779371e-12 11.090772749302745 0.07944913291296052 SPSVPKSPT(ph)PK ddPTM_A549_PD325901_60min_R1 1 SPSVPKSPTPK 11 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 S(0.012)PS(0.001)VPKS(0.377)PT(0.61)PK 94.551 0.00011377 111250000.0 5737.2 5977.5 6280.4 6755.9 6654.4 6438.1 6561.8 6994.2 5980.3 6586.1 6843.2 True False 6319.6363204965855 6481.244903038072 6706.625711113197 7173.196599237862 6187.017900433744 6385.670248145255 6811.51288975474 6854.695194156248 5728.968788053452 6170.252522009143 6001.529782618929 1.0530042421515473 1.0799321402700441 1.1174860334004009 1.1952280266961608 1.0309068061866506 1.0640070914317277 1.1349627739050148 1.142157990119149 0.9545847468165796 1.028113288694968 1.0 12.551114573465245 -8.765854855935244 24.99889673890478 0.9785539023834164 1.1025192752660509 0.5019642536155885 0.047200520866639714 54.63095442832184 309300.5487672238 0.008039713579869594 0.00870296591154031 1.7145302190139474e-09 8.765854855935244 0.12396537288263443 SPSVS(ph)PSKQPVSTSSK ddPTM_A549_PD325901_60min_R1 1 SPSVSPSKQPVSTSSK 16 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 S(0.108)PS(0.121)VS(0.751)PS(0.019)KQPVS(0.001)T(0.001)SSK 67.43 0.0006265 4706300.0 2392.1 2149.2 1949.1 2591.6 2739.7 2511.9 2542.9 2324.2 2250.2 2499.7 2492.9 True False 2634.944231029054 2330.320626618055 2081.3776468904425 2751.6772460493557 2547.2729234519006 2491.443919217791 2639.671451028274 2277.8420077003716 2155.6319192812866 2341.868515398528 2186.2891037951167 1.2052130829610457 1.0658794495992858 0.9520139140232821 1.2586063029234322 1.1651125731863012 1.1395766071801596 1.207375294715664 1.0418759366024972 0.9859775249025332 1.071161408312078 1.0 11.094268472969919 -8.472076767641473 5.230047040593915 0.9941208156692799 1.1368812129240973 0.3201338723801004 0.08010883194136008 0.14951200604221654 9.208430168430956 0.012711050207651516 0.01522891990900319 3.3722769366502286e-09 8.472076767641473 0.14276039725481737 SPT(ph)DSPREGLR ddPTM_A549_MK2206_60min_R1 1 SPTDSPREGLR 11 1 P49454 P49454 CENPF Centromere protein F 1 S(0.022)PT(0.58)DS(0.398)PREGLR 51.726000000000006 0.0095276 2867100.0 587.3 629.81 512.97 556.03 755.08 651.79 586.68 390.71 824.15 1065.3 885.03 True False 686.4218818935781 661.8646388639891 585.7168594720815 692.2573749611355 644.0087322484273 720.7619851768144 693.2721618910754 446.09433899919236 637.4813408971125 824.6479901170176 665.2526254146142 1.0318213798341198 0.994907218068454 0.8804427627881025 1.0405932250619692 0.9680664271667523 1.083441023216713 1.0421186409583851 0.6705638158453973 0.958254528495557 1.2396012561439518 1.0 9.377758488618868 SPT(ph)GPSNSFLANMGGTVAHK ddPTM_A549_MK2206_60min_R1 1 SPTGPSNSFLANMGGTVAHK 20 0 Q96I25;Q5W012;H0Y6J6 Q96I25 RBM17 Splicing factor 45 1 S(0.378)PT(0.613)GPS(0.006)NS(0.003)FLANMGGTVAHK 88.28200000000001 1.2495999999999999e-06 7524800.0 2038.5 2742.5 2100.0 2148.5 3171.0 2196.0 1865.3 2361.1 4064.4 3492.9 3770.1 True False 2382.548963460002 2882.081535835394 2397.811577463343 2674.8825964498287 2704.550100598298 2428.379262413176 2204.2008651657166 2695.79315556549 3143.819889513107 2703.851464075594 2833.8801205333534 0.8407373855361221 1.0170089817677146 0.8461231511134142 0.9438940543280284 0.9543629178249379 0.8569096641801984 0.7778031431869011 0.9512728276798545 1.1093694001852912 0.9541163878049692 1.0 11.468563014982218 -8.569074154454762 6.434793631617852 1.051068829020924 0.8949800491909251 0.36862882528856433 0.07184588911873027 0.11627262026682603 11.624928396203927 0.011896352957116153 0.013538770300571396 2.697278841009616e-09 8.569074154454762 -0.1560887798299989 SPT(ph)KTDPKNEEEEK ddPTM_A549_PD325901_60min_R1 1 SPTKTDPKNEEEEK 14 2 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 S(0.307)PT(0.638)KT(0.054)DPKNEEEEK 122.49 5.460499999999999e-07 281810000.0 12731.0 12715.0 12841.0 12975.0 15784.0 12146.0 14812.0 14642.0 13885.0 14326.0 14753.0 True False 14023.441747933153 13786.537673296381 13712.46747920587 13776.43628163698 14675.386291843926 12047.08700299347 15375.678765437404 14349.953823573202 13301.461736388163 13421.453915109552 12938.474526972333 1.0838558841460817 1.065545837305327 1.0598210361368354 1.064765112217656 1.134243937432556 0.931105670755805 1.1883687472881233 1.1090916316029693 1.0280548691160711 1.0373289283161142 1.0 13.659379910163802 -8.924688300699078 5.124048554112525 1.0120241983792215 1.0783878604154125 0.15452639638933707 0.0598538451760807 0.2307213196822086 10.531420690477383 0.009918807799393775 0.010421746652346735 1.1893555384994465e-09 8.924688300699078 0.06636366203619093 SPT(ph)SPLNMK ddPTM_A549_PD325901_60min_R1 1 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 S(0.101)PT(0.514)S(0.385)PLNMK 71.34899999999999 0.0033313 56676000.0 3632.7 3824.2 3368.3 3273.7 3824.4 3726.8 3651.3 3667.6 3312.3 3684.7 4229.5 True False 4001.4890297476027 4146.478755031068 3596.8930932333287 3475.9090138878614 3555.7873374637556 3696.4501764166007 3790.252219568024 3594.446840823458 3173.0955498335256 3452.047413165162 3709.298313009522 1.0787725041454035 1.1178606855340363 0.9696963656490076 0.9370799327993921 0.9586145511652806 0.9965362352906857 1.0218245877595162 0.9690368736903018 0.8554436127999231 0.9306470178087023 1.0 11.856930583075398 -5.824815282520713 5.089451867679701 0.9466536969545994 1.0985203965220331 0.5858703704169648 0.04398138364419224 0.1167225996415089 5.830878116911145 0.008374744960758598 0.028055502969369435 1.4968721819424243e-06 5.824815282520713 0.1518666995674337 SPTAALNES(ph)LVECPK ddPTM_A549_MK2206_60min_R1 2 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 SPTAALNES(1)LVECPK;SPTAALNES(1)LVECPK 177.74 1.0138999999999999e-27 13829900.0 4949.700000000001 4930.5 4965.7 4863.700000000001 7478.9 6610.0 5214.9 5398.9 8055.8 7367.6 8787.6 True False 5785.08835145351 5181.441390131783 5669.910928671293 6055.306718339788 6378.763717238918 7309.4658126371105 6162.379827241031 6164.210608437819 6231.174162469162 5703.2540429795745 6605.396394578103 0.875812442717605 0.7844255031211839 0.8583755750563761 0.9167211710882568 0.9656897688191413 1.1065900327551768 0.9329311155798745 0.9332082800507746 0.9433459841386486 0.8634234347632743 1.0 12.689429425896849 -6.404975929641034 2.2487417458711945 0.9760637533086499 0.8299872035367203 0.44217571143580725 0.060088346906778424 0.1625724058232169 1.5934612371386159 0.00738713475958827 0.020506601927865555 3.9357188819920385e-07 6.404975929641034 -0.14607654977192963 SPTAALNES(ph)LVECPK ddPTM_A549_PD325901_60min_R1 1 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 SPTAALNES(1)LVECPK 165.8 2.7479e-20 9900600.0 5038.2 5418.6 6723.6 5429.7 4830.3 5945.8 6021.4 6154.0 4228.9 4997.8 7076.6 True False 5549.674355073186 5875.244438578354 7179.9039282913045 5765.080237256598 4491.036391630368 5897.379376123709 6250.54767203651 6031.253642280394 4051.174039395886 4682.238055070117 6206.2230622634315 0.894211229502473 0.9466698795121345 1.1568878295638907 0.9289192765743184 0.7236343822280327 0.9502364508911019 1.007141962080382 0.971807423254422 0.6527599795806257 0.7544424375495277 1.0 12.59949983538595 -6.522511879962741 24.999775449775232 0.8572199935591461 1.002148656557653 0.17732847538464436 0.1256003404301528 19.06299257424578 1299002.1894705985 0.021923653994970795 0.046036934531548314 3.002535286510748e-07 6.522511879962741 0.14492866299850682 SPTAPFT(ph)SPLPR ddPTM_A549_MK2206_60min_R1 1 SPTAPFTSPLPR 12 0 Q96HA9-2;Q96HA9 Q96HA9-2 PEX11G Peroxisomal membrane protein 11C 1 S(0.001)PT(0.008)APFT(0.496)S(0.496)PLPR 55.04 0.020474000000000003 3405400.0 1893.8 1654.6 1753.3 1499.4 2376.7 1613.4 1511.5 1609.0 2677.2 2659.9 2892.1 True False 2213.4271410353467 1738.8120726319949 2001.9443041745149 1866.753067310623 2027.0905783954522 1784.1289171117571 1786.1199848270953 1837.08067735584 2070.818474609903 2059.02674261922 2173.911752100612 1.0181770897077822 0.7998540285509805 0.9208949269629146 0.858706921063752 0.932462219975908 0.820699789394756 0.8216156810878821 0.845057613576403 0.9525770641834511 0.9471528642455791 1.0 11.086077661370044 -8.931013800463512 3.585031487122657 0.9804474336041719 0.8737048253792853 0.29863313217231446 0.060603496158266455 0.16200402533844024 3.953182462402328 0.010209274711494062 0.010600973773067618 1.1721581175907539e-09 8.931013800463512 -0.10674260822488657 SPTAPFT(ph)SPLPR ddPTM_A549_PD325901_60min_R1 1 SPTAPFTSPLPR 12 0 Q96HA9-2;Q96HA9 Q96HA9-2 PEX11G Peroxisomal membrane protein 11C 1 S(0.002)PT(0.001)APFT(0.63)S(0.367)PLPR 69.86399999999999 0.003588 6089400.0 3527.6 3413.6 3609.1 3408.8 4130.7 3321.0 3959.0 3869.8 4176.8 4406.9 4663.4 True False 3885.7193551181326 3701.2760520302427 3854.035229281361 3619.3538340534983 3840.573882141391 3293.95487707404 4109.661911447928 3792.6138032006274 4001.2636212132606 4128.64758191374 4089.8313637282445 0.9500928056789008 0.9049947841018562 0.9423457562240575 0.8849640760625729 0.9390543375950755 0.8054011483914357 1.0048487445950842 0.9273276734186231 0.9783444023388176 1.0094909092168807 1.0 11.997825642320867 -8.529693192845983 1.1272132070480156 0.9924657159361928 0.9111931780827934 0.36759168590519276 0.04595938700029501 0.32737787865263585 0.8098675764079912 0.008529636094678026 0.009977708438127984 2.953294843787814e-09 8.529693192845983 -0.08127253785339938 SPTAPFTS(ph)PLPR ddPTM_A549_PD325901_60min_R1 1 SPTAPFTSPLPR 12 0 Q96HA9-2;Q96HA9 Q96HA9-2 PEX11G Peroxisomal membrane protein 11C 1 SPTAPFT(0.103)S(0.897)PLPR 83.455 0.00056374 5779000.0 3899.8 4108.0 4158.2 4161.7 5121.4 4022.7 4608.2 4413.7 4089.9 3884.6 5494.5 True False 4295.704825118974 4454.195577027253 4440.400457287899 4418.758757093539 4761.690531870851 3989.940464921935 4783.567572703797 4325.665291019334 3918.0157260103692 3639.325693050017 4818.7113325052205 0.8914634076836601 0.9243541000227425 0.9214912765856345 0.9170000965374807 0.988166794667751 0.8280098535903764 0.9927068136320271 0.8976809342863138 0.8130837179602156 0.7552487463817328 1.0 12.23443166290599 SPTAPSVFS(ph)PTGNR ddPTM_A549_MK2206_60min_R1 1 SPTAPSVFSPTGNR 14 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 NELFA Negative elongation factor A 1 SPTAPS(0.001)VFS(0.99)PT(0.009)GNR 121.18 2.0228e-06 5516800.0 2893.1 3274.5 2960.9 2733.5 4192.1 3427.8 3596.3 3352.5 4497.3 4694.8 4488.0 True False 3381.3845504960204 3441.1580634796724 3380.8001427196236 3403.2076227114776 3575.447643241289 3790.527520810513 4249.701158738792 3827.7271416006547 3478.6687307123534 3634.2414193197924 3373.505737501314 1.0023354971379246 1.0200540124258 1.0021622625796132 1.0088044567050782 1.0598611419257729 1.1236167404944384 1.259728451473291 1.1346437324976282 1.0311732071601372 1.0772892362150241 1.0 11.720032900169539 -3.9274997154311473 13.896268805847821 1.0441702849265566 0.633973391727461 0.0 0.07964276662207695 0.0 0.0 0.011574703461497202 0.0 0.000118168108683397 3.9274997154311473 -0.4101968931990956 SPTAPSVFS(ph)PTGNR ddPTM_A549_PD325901_60min_R1 2 SPTAPSVFSPTGNR 14 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4 H0Y3X6 NELFA Negative elongation factor A 1 SPTAPSVFS(0.858)PT(0.142)GNR;SPTAPSVFS(0.992)PT(0.008)GNR 124.45 9.1669e-07 15006000.0 6420.9 6520.9 6721.1 7691.4 7732.9 8031.3 7318.3 7404.7 8020.5 7916.2 8454.9 True False 7072.74504118325 7070.439128100541 7177.234263257588 8166.48030956321 7189.767781056762 7965.895755569026 7596.801911227425 7257.007449625224 7683.42627704006 7416.369781012853 7415.000900027004 0.9538427758191496 0.9535317963447303 0.9679343751976416 1.1013458284992883 0.9696246673457016 1.0742946444605308 1.0245180025803853 0.9786927267397628 1.0362003161742137 1.000184609685731 1.0 12.856231152455198 -6.025209746901703 24.90110765913572 1.020921441952161 0.955448709716884 0.38292047765181625 0.03674452333124185 484.7386708101644 478804.672594207 0.004653949110743209 0.012374002337864981 9.436050426445244e-07 6.025209746901703 -0.06547273223527705 SPTDS(ph)PREGLR ddPTM_A549_MK2206_60min_R1 2 SPTDSPREGLR 11 1 P49454 P49454 CENPF Centromere protein F 1 SPT(0.001)DS(0.999)PREGLR;S(0.001)PT(0.004)DS(0.995)PREGLR 89.01299999999999 8.4517e-05 15330900.0 1685.07 1925.4299999999998 2135.8 1427.35 2606.3 1701.15 1406.5 1456.1100000000001 2377.5 2818.5 3062.7 True False 1969.4686199938906 2023.4261628235338 2438.688555783909 1777.0508140761774 2222.916722544732 1881.1645638680218 1662.0428439691095 1662.5180516498517 1839.0000460873453 2181.798892466738 2302.1470637801394 0.8554920973467313 0.878930019136595 1.0593104993820714 0.7719102059267444 0.9655841529492425 0.8171348361990125 0.7219533756631625 0.7221597950045758 0.7988195346077048 0.947723508542591 1.0 11.168764282080703 -4.37815288855397 19.26808896094835 0.8778405801768386 0.867007406746827 0.0 0.10897269875616666 0.0 0.0 0.015712373518196855 0.0 4.186461594375135e-05 4.37815288855397 -0.010833173430011667 SPTDS(ph)PREGLR ddPTM_A549_PD325901_60min_R1 3 SPTDSPREGLR 11 1 P49454 P49454 CENPF Centromere protein F 1 S(0.002)PT(0.007)DS(0.991)PREGLR;S(0.004)PT(0.025)DS(0.97)PREGLR;SPT(0.002)DS(0.998)PREGLR 103.85 5.7029e-05 22403500.0 5112.44 5426.09 4619.5 5061.4 5526.2 5757.66 5216.48 5158.74 5658.82 5538.59 5724.68 True False 5631.45114522059 5883.365647164513 4933.007049310142 5374.031182726586 5138.058776355036 5710.771525906088 5414.996000967385 5055.844883746761 5420.999474476633 5188.882482178317 5020.580651736459 1.1216732756345325 1.1718496435526125 0.9825570768600186 1.0704003292662732 1.0233993103124326 1.1374723208421946 1.078559707848635 1.0070239349701724 1.0797554805939988 1.0335223835879717 1.0 12.293638512371363 -14.999999999999998 0.14309286625037082 0.7425821097264182 1.1027616312921888 0.18617532785819058 0.05260878494141498 73.79375438099741 0.7048818114723646 5.4533681891294306 0.11549205332202518 1.000000000000004e-15 14.999999999999998 0.3601795215657706 SPTGS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 SPTGSPSR 8 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 S(0.013)PT(0.055)GS(0.901)PS(0.031)R;S(0.005)PT(0.005)GS(0.85)PS(0.14)R 76.064 0.0047227 9768500.0 733.05 1151.5700000000002 875.99 644.38 1219.8600000000001 1035.5 1489.12 1409.49 1597.01 2473.2 3225.8 True False 856.7709186482001 1210.179994246842 1000.2185541629113 802.2531289273174 1040.4202099387712 1145.0759226907305 1759.673828518508 1609.28952388209 1235.2897849009255 1914.5024022880016 2424.7448324491384 0.3533447755749251 0.4990958133208958 0.412504664729043 0.3308608469605412 0.4290844116936973 0.4722459482609289 0.7257150546192241 0.6636943823307835 0.5094514558272956 0.7895686080725611 1.0 11.243617218217715 -14.999999999982471 0.16283167427873252 3.0231140932708973 0.3394128522104539 0.7018463179262339 0.10827547434614544 17.087031609819093 0.17836618387198516 11.030195366244394 0.14856110003472978 1.0000000000403621e-15 14.999999999982471 -2.6837012410604433 SPTGS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 SPTGSPSR 8 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 S(0.001)PT(0.007)GS(0.991)PS(0.001)R;S(0.001)PT(0.003)GS(0.885)PS(0.11)R 89.88600000000001 0.0026491 24257000.0 2556.0 3140.2 2077.8 2579.0 2725.4 2085.5 1852.97 1899.79 1920.54 3270.2 3728.6000000000004 True False 2815.4832383722523 3404.835674532857 2218.8120028264134 2738.298972666033 2533.977306119578 2068.51637944532 1923.4857873340904 1861.897198093576 1839.8263826577559 3063.7190139041777 3270.0058375428075 0.8610025113863103 1.041232292444886 0.6785345693736448 0.8373988025427145 0.774915224011861 0.6325726870872111 0.5882209032322286 0.5693865058946403 0.5626370331009144 0.9369154570703639 1.0 11.675077495855335 -5.765258295093961 24.999841142939246 0.7462174440898819 0.9511174121500211 0.24821750979030177 0.14572088342535577 124.32617850306572 813906.1862681248 0.025586002936526613 0.0841806365979212 1.7168869710440977e-06 5.765258295093961 0.20489996806013921 SPTKT(ph)DPKNEEEEKR ddPTM_A549_PD325901_60min_R1 1 SPTKTDPKNEEEEKR 15 3 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 1 S(0.269)PT(0.218)KT(0.513)DPKNEEEEKR 105.79 1.1912000000000001e-06 68817000.0 7272.7 7704.5 8139.1 7755.7 9149.5 8550.1 9606.7 9562.3 8258.5 8888.2 9509.8 True False 8011.019150121236 8353.785253945101 8691.468270384283 8234.751974527324 8506.87068406145 8480.470820376619 9972.288225487955 9371.57242502077 7911.423964707356 8326.997535130304 8340.154887589073 0.9605360161886656 1.0016343061417614 1.04212312451391 0.9873619957324056 1.0199895324150954 1.0168241399205127 1.1956958066003844 1.1236688708223563 0.9485943692101321 0.9984224090995781 1.0 13.025858461315444 -8.797840172887257 24.98245169614709 0.975725114056833 1.043571135004239 0.15282251869576424 0.06359295144865157 221.99593911475893 152358.40996479883 0.011908264433480673 0.012677510291643962 1.5927947924193235e-09 8.797840172887257 0.06784602094740588 SPTLGIART(ph)PMK ddPTM_A549_PD325901_60min_R1 2 SPTLGIARTPMK 12 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 SPTLGIART(1)PMK;S(0.001)PT(0.001)LGIART(0.998)PMK 55.18600000000001 0.005389100000000001 26680000.0 4824.6 4629.9 5086.0 5480.1 6299.799999999999 6963.0 6923.5 6039.0 7075.1 6253.9 6332.8 True False 5314.389840317196 5020.077921635461 5431.166544602534 5818.593330789895 5857.323781130157 6906.29563657529 7186.977581184568 5918.547407496146 6777.758151323004 5859.027686702751 5553.9057469267555 0.956874329971823 0.9038824478455209 0.9779003807559861 1.0476579178553047 1.054631469821269 1.2435024919889714 1.2940402499919035 1.0656549961747486 1.2203588717855836 1.0549382639316187 1.0 12.439286978636424 -6.453225186176628 1.6737461171458652 1.1266592407321419 0.933051276922564 0.48644448557856956 0.08573397853863908 0.3176826977217634 1.723658306381057 0.015654458776754827 0.04803107386690644 3.5218821046443547e-07 6.453225186176628 -0.1936079638095779 SPTPKS(ph)PPSR ddPTM_A549_MK2206_60min_R1 7 SPTPKSPPSR 10 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 S(0.005)PT(0.008)PKS(0.987)PPSR;SPT(0.001)PKS(0.999)PPSR;S(0.015)PT(0.004)PKS(0.94)PPS(0.042)R;S(0.021)PT(0.016)PKS(0.961)PPS(0.003)R;S(0.028)PT(0.005)PKS(0.966)PPS(0.001)R;S(0.004)PT(0.008)PKS(0.988)PPSR;S(0.006)PT(0.005)PKS(0.967)PPS(0.023)R 105.95 8.5227e-05 584437200.0 24869.7 28270.399999999998 27237.199999999997 25727.2 31841.199999999997 26408.8 24761.800000000003 25249.4 35469.299999999996 46830.8 43334.40000000001 True False 29067.097354212045 29709.2426073586 31099.84452270693 32030.36515493789 27157.401659782583 29203.361687257322 29260.698538069173 28828.579773044483 27435.56018283318 36251.689754596875 32573.272511403055 0.8923603652054429 0.9120742350022758 0.9547657365964591 0.983332735257868 0.8337326760851396 0.8965436824634058 0.8983039247231227 0.88503787155412 0.8422721473020158 1.112927469658018 1.0 14.991401048586376 -11.013493890000724 1.315402219557285 0.9996639838433119 0.8952658353040426 0.49966029877108264 0.05422163526085856 0.3428538685191575 1.0619598251108036 0.031497210670017727 0.007236293306464895 9.694069075896769e-12 11.013493890000724 -0.10439814853926932 SPTPKS(ph)PPSR ddPTM_A549_PD325901_60min_R1 4 SPTPKSPPSR 10 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 S(0.001)PT(0.001)PKS(0.998)PPSR;SPT(0.004)PKS(0.995)PPS(0.001)R;S(0.001)PT(0.015)PKS(0.984)PPSR;SPT(0.012)PKS(0.987)PPS(0.001)R 106.79 8.737799999999999e-05 1238944000.0 38500.200000000004 40963.799999999996 40549.799999999996 40149.6 49630.799999999996 48019.9 43765.4 45807.2 43815.3 41006.6 41682.100000000006 True False 42408.71196165074 44415.96318846861 43301.75327375612 42629.54960564256 46144.903824965004 47628.841855347084 45430.91624634581 44893.5394609468 41973.89531281011 38417.43627776984 36555.46594460204 1.1601195844670398 1.2150293270992294 1.1845493459002203 1.1661607506315332 1.2623256914546042 1.3029198404289577 1.242794068476492 1.2280937556364537 1.148224874945362 1.0509354835194695 1.0 15.15779952038076 -9.751861156874964 0.7547653038533759 1.0148435459271468 1.2217696092863788 0.7343543706143263 0.0439575754897905 0.2095144583269994 0.2512470790365944 0.019737049890042064 0.01050997353708937 1.7706749492741376e-10 9.751861156874964 0.20692606335923203 SPTPVKPTEPCT(ph)PSK ddPTM_A549_PD325901_60min_R1 1 SPTPVKPTEPCTPSK 15 1 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 SPTPVKPT(0.002)EPCT(0.965)PS(0.033)K 65.097 0.0011966 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPTS(ph)PLNMK ddPTM_A549_MK2206_60min_R1 7 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 S(0.359)PT(0.064)S(0.577)PLNMK;S(0.152)PT(0.086)S(0.761)PLNMK;S(0.064)PT(0.074)S(0.861)PLNMK;S(0.051)PT(0.094)S(0.855)PLNMK;S(0.045)PT(0.027)S(0.928)PLNMK;S(0.003)PT(0.114)S(0.883)PLNMK;S(0.005)PT(0.254)S(0.741)PLNMK 111.33 0.00032456 272085900.0 56019.8 68677.20000000001 56177.50000000001 60470.200000000004 81015.8 62608.100000000006 55483.299999999996 59147.3 84104.99999999999 82198.4 85239.7 True False 65474.57268738613 72172.57613596151 64144.31423473663 75285.4017146103 69098.48314098142 69233.24758610663 65563.8974225321 67531.61090600933 65055.351788086795 63629.724350731856 64072.32999395962 1.0218853082689314 1.126423467708534 1.0011234840497263 1.1750064610059878 1.078444987836335 1.0805483052143345 1.0232794316784344 1.053990246840966 1.0153423762522737 0.9930920938372385 1.0 15.967413834693577 -8.265100556164935 0.9585640414921858 1.0053949612172723 1.0835420783208 0.33091289795386125 0.04549301796243882 0.3829515378296824 0.6921511905879548 0.008407953927390492 0.011160404243456913 5.431245623460706e-09 8.265100556164935 0.07814711710352773 SPTS(ph)PLNMK ddPTM_A549_PD325901_60min_R1 6 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 S(0.006)PT(0.026)S(0.967)PLNMK;S(0.002)PT(0.01)S(0.989)PLNMK;SPT(0.007)S(0.992)PLNMK;SPT(0.045)S(0.955)PLNMK;S(0.151)PT(0.107)S(0.742)PLNMK;S(0.001)PT(0.119)S(0.88)PLNMK 100.79 0.00040199 346649000.0 56414.6 64963.100000000006 60777.100000000006 65727.6 73737.4 66878.1 65119.700000000004 65706.09999999999 66438.0 67246.3 77639.4 True False 62141.76866176651 70437.76842501934 64901.79948839214 69787.44457378976 68558.33940422018 66333.46692696342 67597.86581836705 64395.54029006165 63645.84190436855 63000.35714167459 68090.24599670677 0.9126383339072095 1.0344766330911201 0.9531732267721746 1.0249257225060557 1.0068746029722973 0.9741992550617555 0.9927687120066575 0.9457381060596577 0.9347277421709832 0.9252479003339428 1.0 16.05516052492262 -8.226715517006715 24.323976848806534 0.9665578366072319 0.988108421390365 0.11630032164340254 0.03724682454153757 995.0321286224497 697018.0119828288 0.005927411691056603 0.007652040728547674 5.933138453554299e-09 8.226715517006715 0.021550584783133098 SPTS(ph)SPTPQR ddPTM_A549_MK2206_60min_R1 1 SPTSSPTPQR 10 0 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 S(0.016)PT(0.084)S(0.434)S(0.434)PT(0.031)PQR 65.5 0.0055315 8771900.0 4291.2 4594.0 4587.3 3491.1 1827.2 946.72 993.68 1400.4 1922.7 6140.2 6647.5 True False 5015.449650232798 4827.814977439492 5237.848118713138 4346.419656721432 1558.4213004772034 1046.9012820181254 1174.218793597742 1598.9109885451323 1487.2115199209836 4753.124555445894 4996.7422883333265 1.0037439116968572 0.9661925108108427 1.048252604690612 0.8698506758833042 0.31188746798406886 0.2095167654458564 0.2349968691279864 0.3199906851866984 0.29763622658575134 0.9512446872722964 1.0 12.286772096305775 -6.587492542194374 6.379905230748487 0.5456391058347704 0.9956169262122239 0.4466988799807782 0.26141247391969374 0.20874455355361096 15.775498746985615 0.04825907674502682 0.10145236345980858 2.585279234195964e-07 6.587492542194374 0.4499778203774535 SPTS(ph)SPTPQR ddPTM_A549_PD325901_60min_R1 1 SPTSSPTPQR 10 0 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 S(0.006)PT(0.053)S(0.494)S(0.281)PT(0.165)PQR 71.34899999999999 0.002669 9210300.0 1647.3 1628.0 1387.7 1487.4 2041.4 2206.8 1401.4 1700.4 2011.4 1838.4 2456.2 True False 1814.532683321834 1765.1972734664973 1481.8776669179972 1579.2733198695064 1898.019106447682 2188.828552462209 1454.7310438755044 1666.4841880620052 1926.8678528319158 1722.3231102566938 2154.102971134647 0.842361162691332 0.8194581675622971 0.6879326043255196 0.7331466234586009 0.8811180950407046 1.0161206691569022 0.6753303177095767 0.773632556285926 0.8945105589901128 0.7995546792962648 1.0 11.07287150037271 -9.485136680536076 0.7396966349985205 0.9879707105536027 0.8015952012740296 5.9907298289862965e-05 0.10793862638093683 0.4492128737692883 0.5323596602978595 0.034606893488070896 0.02215064542713306 3.2723769089460514e-10 9.485136680536076 -0.18637550927957314 SPTSSPT(ph)PQR ddPTM_A549_PD325901_60min_R1 1 SPTSSPTPQR 10 0 A0A0D9SFB1;Q05193-2;Q05193;A0A0U1RQP1;Q05193-5;Q05193-3;A0A0D9SFE4 A0A0D9SFB1;A0A0D9SFE4 DNM1 Dynamin-1 1 S(0.002)PT(0.001)S(0.077)S(0.23)PT(0.69)PQR 76.30199999999999 0.0015712999999999999 7910200.0 1577.6 2253.6 1935.6 1927.0 1999.7 2088.2 2522.0 2451.8 2271.9 2484.1 2197.2 True False 1737.7567906322613 2443.5187810098882 2066.9614557083487 2046.0264134654701 1859.2479705904896 2071.1943915405027 2617.9760900913534 2402.8969256001096 2176.419943745069 2327.2535020608407 1926.9583291983752 0.9018133730765093 1.268070380134481 1.0726549839654371 1.0617906897429525 0.9648615345843761 1.0748516769442182 1.3586054510999444 1.2469895633911956 1.1294587489343741 1.2077342134476725 1.0 10.912109658107406 -10.508973263446741 1.0744321480556798 1.0071655885016015 1.1241035433973647 0.0 0.13951503969628726 0.8263043417568204 1.8343842068851022 0.062465303952406355 0.02257839834510619 3.097609992095995e-11 10.508973263446741 0.1169379548957632 SPTTTQS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SPTTTQSPK 9 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 SPT(0.144)T(0.037)T(0.373)QS(0.446)PK;SPT(0.019)T(0.059)T(0.005)QS(0.916)PK 135.15 4.5601000000000006e-05 295120000.0 13896.1 15677.9 15033.1 12044.5 22792.0 19727.0 20662.5 20413.5 26557.0 26594.0 31205.0 True False 16241.421952973531 16475.83814427482 17165.01963103057 14995.403040698158 19439.326992379833 21814.498046277204 24416.60879026786 23307.176138721836 20541.881902814577 20586.396929664865 23455.93728581293 0.6924226371800959 0.7024165329023135 0.7317984961279993 0.6393009521630997 0.8287593352382255 0.930020309163747 1.0409564321710554 0.9936578468266509 0.87576470095864 0.8776625158405553 1.0 14.517665530802313 -7.039039167394518 2.89332206653665 0.9519165656577958 0.6955685775033564 0.8471378093776151 0.05175301788142365 0.08470335016265808 1.418897407573963 0.008748094958534474 0.016654867553762512 9.140308047343166e-08 7.039039167394518 -0.2563479881544394 SPTTTQS(ph)PK ddPTM_A549_PD325901_60min_R1 4 SPTTTQSPK 9 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 SPT(0.031)T(0.096)T(0.011)QS(0.863)PK;SPT(0.017)T(0.159)T(0.032)QS(0.792)PK;SPTT(0.001)T(0.001)QS(0.998)PK;SPT(0.001)T(0.005)T(0.027)QS(0.967)PK 150.33 2.2809e-05 586778000.0 39023.1 38042.8 35395.5 33710.7 43153.5 32577.399999999998 30665.399999999998 34115.5 37139.1 39435.9 44893.5 True False 42984.69638471212 41248.80026721819 37797.651480432316 35792.93337644545 40122.54703149308 32312.10045540255 31832.388577750746 33435.039589408 35578.27278169921 36945.910543827194 39371.8841033439 1.0917612241234191 1.0476714845280894 0.9600163248784458 0.9090988199217398 1.0190659640818516 0.8206897178349217 0.8085055948604497 0.849211063957397 0.9036466908292434 0.9383830971068345 1.0 15.26487813247088 -5.7155199884924475 2.09859309062824 0.9279663349373812 1.0926294326604182 0.4635573368529039 0.06510595650478467 0.31081626245158495 2.4911420546636207 0.010867366617949105 0.06825690590819156 1.9252184344659206e-06 5.7155199884924475 0.164663097723037 SPTTVLFTS(ph)SPIK ddPTM_A549_PD325901_60min_R1 1 SPTTVLFTSSPIK 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 SPTTVLFT(0.007)S(0.7)S(0.293)PIK 136.93 1.5349e-08 6765200.0 3697.0 2917.3 4508.6 3942.4 4298.5 4840.8 4520.9 4436.6 4155.0 4841.1 5070.5 True False 4072.3167184124472 3163.1511092652413 4814.580708414268 4185.9130941599715 3996.588189019963 4801.3781297621235 4692.945323431401 4348.108532554629 3980.3797994017154 4535.432119812708 4446.860644547772 0.9157734059882117 0.7113222927602944 1.0826920592434917 0.9413187029578397 0.8987437449653655 1.0797230931104218 1.0553389679942748 0.9777928476094206 0.895098838836337 1.019917753746912 1.0 12.118571478969223 -5.758998309615427 24.999999999960828 0.9695254102991301 0.813547875524652 0.41329456587878266 0.07867990670050885 48.47410654998828 496409.7570517454 0.010797634755895048 0.0382440490277434 1.7418136529601355e-06 5.758998309615427 -0.15597753477447807 SPTTVLFTSS(ph)PIK ddPTM_A549_MK2206_60min_R1 2 SPTTVLFTSSPIK 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 SPTTVLFT(0.002)S(0.12)S(0.878)PIK;SPTTVLFTS(0.091)S(0.909)PIK 176.05 5.363099999999999e-22 5417100.0 4562.2 4508.700000000001 4604.9 4701.1 5872.3 5231.1 4938.3 4725.6 7525.6 6765.4 6645.1 True False 5332.187824918922 4738.173571785248 5257.944063362353 5852.869711040398 5008.492448988772 5784.651529876851 5835.525187609421 5395.468271543044 5821.063615913747 5237.091441225639 4994.938274569958 1.067518261850393 0.9485950198640211 1.0526544622445888 1.171760167855989 1.0027135819651307 1.1581027055584354 1.168287747882497 1.0801871764886963 1.165392502555983 1.0484797115288735 1.0 12.28625113454724 -5.997230072535399 24.81297323591429 1.0923090526201589 1.0061986416696893 0.22366190483679838 0.06567812069019661 104.33434555319606 934571.458298827 0.010345186468869137 0.03190959878623936 1.0063983764009732e-06 5.997230072535399 -0.08611041095046956 SPTTVLFTSS(ph)PIK ddPTM_A549_PD325901_60min_R1 1 SPTTVLFTSSPIK 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 SPTTVLFT(0.014)S(0.486)S(0.5)PIK 140.01 2.3371e-09 5074700.0 4326.4 5116.9 4910.6 5014.6 6803.0 5447.9 5433.0 6300.3 6482.0 5688.2 5534.4 True False 4765.612943072654 5548.11912076211 5243.862845836646 5324.340453017097 6325.180749075912 5403.534108645486 5639.755788051675 6174.635574010267 6209.584081762199 5329.046081245712 4853.70388545216 0.9818507794339211 1.1430691388881997 1.080383758381696 1.0969644170044162 1.30316576749442 1.1132805453668722 1.1619488788666161 1.2721492121753226 1.2793495912212471 1.0979339092395561 1.0 12.24487037996184 -4.207842018047986 0.9876966175788545 1.1535427157252554 3.888891390745316e-09 0.23802536800296759 0.08982852256284587 19.772657106961415 3.0257868907006813 0.01742735949587087 39.5154002910647 6.196664482179151e-05 4.207842018047986 -1.153542711836364 SPVAEEPGGGGSSSSEAKLS(ph)PREEEELDPR ddPTM_A549_MK2206_60min_R1 1 SPVAEEPGGGGSSSSEAKLSPREEEELDPR 30 2 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 SPVAEEPGGGGS(0.104)S(0.11)S(0.104)S(0.104)EAKLS(0.579)PREEEELDPR 61.283 0.00022565 7503200.0 1130.2 1118.8 1577.7 1488.5 1789.0 1400.0 1351.9 1342.7 2127.6 1981.7 1951.5 True False 1320.9501292629357 1175.7421412188298 1801.4415836971018 1853.1825668213044 1525.8404698739696 1548.1470707552126 1597.522730722957 1533.0318368462945 1645.7019970790477 1534.0325936495772 1466.8886913399763 0.9005114955629466 0.8015210343906944 1.2280697194901118 1.263342322946437 1.0401883107300678 1.0553950547815651 1.0890551820013343 1.045090773346884 1.1218997097698864 1.0457730042545124 1.0 10.518543686999697 -5.745663899845941 24.99997036955666 1.0808448465555522 0.8510161565546823 0.5720342370592547 0.08145158798347243 149.02840613219914 236166.66751225517 0.012211876510319635 0.04697414478571311 1.796123107348185e-06 5.745663899845941 -0.22982869000086992 SPVAEEPGGGGSSSSEAKLS(ph)PREEEELDPR ddPTM_A549_PD325901_60min_R1 2 SPVAEEPGGGGSSSSEAKLSPREEEELDPR 30 2 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 SPVAEEPGGGGS(0.108)S(0.116)S(0.116)S(0.116)EAKLS(0.543)PREEEELDPR;SPVAEEPGGGGS(0.017)S(0.017)S(0.017)S(0.017)EAKLS(0.93)PREEEELDPR 76.976 2.3241999999999997e-06 30011000.0 6347.299999999999 6136.0 5955.799999999999 5226.4 6923.5 5117.1 5967.299999999999 5819.4 5758.6 6302.0 7195.1 True False 6991.673223364705 6653.102254293873 6359.996403134827 5549.222857984397 6437.217244778345 5075.4280341691 6194.388866931854 5703.3275017690175 5516.586068070934 5904.090644493951 6310.148313496826 1.1080045786578678 1.0543495847892355 1.007899670049178 0.8794124293584543 1.020137233701739 0.8043278512667011 0.9816550355373782 0.903834144368703 0.8742403179765941 0.9356500594234283 1.0 12.62345819932027 -5.8458167947018955 2.059962859100823 0.9322848233563683 1.0974502272890736 0.5091985668221858 0.059972048020158944 0.2331739165570122 1.8732880629270805 0.009054572936056963 0.046447071228955444 1.4262091070254537e-06 5.8458167947018955 0.1651654039327053 SPVDIVTGGIS(ph)PVRDLDR ddPTM_A549_PD325901_60min_R1 1 SPVDIVTGGISPVRDLDR 18 1 A0A494C0R9;E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494BZW2;H0Y9N9;H0YAC6 A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 SPVDIVT(0.122)GGIS(0.878)PVRDLDR 79.568 8.7565e-05 3495800.0 499.46 496.47 467.97 287.47 430.24 451.97 407.47 284.04 311.45 347.02 542.54 True False 550.1648115169812 538.3092692616169 499.72925833221495 305.22636900826075 400.0214266474232 448.2893061701761 422.9764938261398 278.37459937493077 298.36083959654985 325.10909797719626 475.8110194444229 1.156267486531474 1.1313509928588237 1.0502683584666028 0.6414865493545231 0.8407149273560439 0.9421583104435405 0.8889590121725744 0.5850528634245855 0.627057439621572 0.6832735785665649 1.0 8.894244873714593 -6.081138023311198 5.535179957613644 0.808086775168855 1.132673232047571 0.5633450248667844 0.1311534956268518 0.15797248248539134 8.119143056966086 0.022775853953521302 0.062444945587402205 8.295870741988774e-07 6.081138023311198 0.324586456878716 SPVEKS(ph)PRPPLK ddPTM_A549_MK2206_60min_R1 1 SPVEKSPRPPLK 12 2 Q7L590 Q7L590 MCM10 Protein MCM10 homolog 1 S(0.123)PVEKS(0.877)PRPPLK 47.532 0.0072374 2087800.0 1702.2 2242.4 1966.5 1826.0 2148.6 1486.7 1494.6 1358.2 2460.2 2241.3 2256.6 True False 1989.4897452056018 2356.5285819352 2245.3792700388885 2273.3700819722544 1832.5437862332103 1644.0216072084095 1766.1494735842386 1550.7290093130534 1902.9686281321094 1734.988773349546 1696.2239410083469 1.1728933291808854 1.3892791658949966 1.3237516673087917 1.3402535048649378 1.0803666555630773 0.9692243856852386 1.0412242339501019 0.914224219940675 1.1218852547269553 1.0228536052369093 1.0 10.728110936434845 -6.815038867426944 5.224821762749796 1.0398205550387096 1.3140266420046993 0.7844871327139185 0.07161095842023948 0.0737124316891351 4.236156705955621 0.010972928394637746 0.02135306873778113 1.5309504422868824e-07 6.815038867426944 0.2742060869659897 SPVEKS(ph)PRPPLK ddPTM_A549_PD325901_60min_R1 1 SPVEKSPRPPLK 12 2 Q7L590 Q7L590 MCM10 Protein MCM10 homolog 1 S(0.136)PVEKS(0.864)PRPPLK 78.373 0.00020402 4181300.0 2149.9 1929.7 2102.3 2160.0 2428.9 2939.1 2264.2 2341.9 2547.8 2619.3 2596.7 True False 2368.156265327271 2092.3225912827397 2244.974720156883 2293.4182942840775 2258.3024432501074 2915.1649440555 2350.36537001778 2295.1889673149917 2440.724826213163 2453.916950987466 2277.3223618375296 1.0398862739030275 0.9187643463854994 0.9857957563572397 1.0070679200785437 0.991648121975988 1.280084450452288 1.032074074976945 1.007845444183425 1.0717520132915161 1.0775448360360567 1.0 11.153122808418926 -7.037754227600325 24.994760237204552 1.0512639928617789 0.9848634432322448 0.20901123695770896 0.07760106272567582 859.5433585221429 569049.7100030935 0.011669374335912775 0.020215417804608244 9.167391369075238e-08 7.037754227600325 -0.06640054962953401 SPVGKS(ph)PPSTGSTYGSSQK ddPTM_A549_MK2206_60min_R1 2 SPVGKSPPSTGSTYGSSQK 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.002)PVGKS(0.996)PPS(0.002)TGSTYGSSQK;S(0.001)PVGKS(0.997)PPS(0.002)TGSTYGSSQK 233.22 4.1112999999999993e-76 139591000.0 29993.0 33394.0 28053.0 27157.0 36244.0 31298.0 30683.0 31638.0 42240.0 42854.0 39129.0 True False 35055.08514155302 35093.61196269357 32031.337229799592 33810.46621912406 30912.555612136483 34609.93358606903 36257.70393281492 36122.78338731142 32672.70744341935 33173.25163660441 29412.189394538513 1.1918556851147681 1.1931655781194592 1.0890497405727784 1.1495392527766821 1.051011714819046 1.1767207507679003 1.2327441336124245 1.2281569013022535 1.1108560129660485 1.1278742698006792 1.0 14.844126559594855 -9.81861855469263 0.9409771361867317 1.0153375899739683 1.158791424254433 0.18406949275382534 0.06353939740231994 0.2914831139861467 0.531963874519778 0.02010044146542531 0.011633281168353 1.518383393709776e-10 9.81861855469263 0.14345383428046476 SPVGKS(ph)PPSTGSTYGSSQK ddPTM_A549_PD325901_60min_R1 4 SPVGKSPPSTGSTYGSSQK 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.008)PVGKS(0.99)PPS(0.001)TGSTYGSSQK;S(0.001)PVGKS(0.999)PPS(0.001)TGSTYGSSQK;SPVGKS(1)PPSTGSTYGSSQK;SPVGKS(1)PPSTGSTYGSSQK 231.41 9.272099999999998e-76 270648000.0 54936.5 54003.4 57706.1 57072.2 67035.8 54941.8 56169.4 53218.2 56506.9 63070.0 57053.3 True False 60513.61303788619 58554.45604294879 61622.38296096896 60597.420173629485 62327.43666895532 54494.37219669576 58306.95725407508 52156.72125212974 54132.11150103798 59087.74943640646 50036.105790667054 1.2093989346623664 1.170244069111202 1.2315583314731704 1.2110738678814683 1.2456492303719786 1.0891009868889574 1.1652976652102038 1.0423817047300719 1.0818610010840397 1.1809022405462208 1.0 15.610681891373085 -8.17657032569972 0.5045736643707452 1.0169486718856755 1.2220033839743913 0.3651041445664074 0.06220671077184602 0.26435117536596414 0.1490886346948044 0.012372066236022987 0.018742073871219844 6.659316776459354e-09 8.17657032569972 0.20505471208871584 SPVGKS(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_A549_MK2206_60min_R1 2 SPVGKSPPSTGSTYGSSQKEESAASGGAAYTK 32 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 SPVGKS(0.988)PPS(0.012)TGSTYGSSQKEESAASGGAAYTK;SPVGKS(0.999)PPS(0.001)TGSTYGSSQKEESAASGGAAYTK 224.0 2.1989999999999993e-115 121805000.0 4697.7 5305.4 5243.6 4286.9 6734.200000000001 5166.0 5155.6 4042.1000000000004 7588.8 8678.8 8530.4 True False 5490.556912261983 5575.422198804409 5987.2213274222795 5337.190692446254 5743.608100740798 5712.662691086732 6092.305784832663 4615.080053412086 5869.948916823406 6718.253052311621 6412.066252936988 0.8562851186615676 0.8695203665824005 0.9337428983488572 0.8323667413763235 0.8957499617397109 0.8909238404188508 0.9501314466365874 0.7197492775902293 0.9154535660224549 1.0477516587160007 1.0 12.646573616937117 -9.752689741523216 1.1188029753804336 0.9849897594109647 0.8740914813670839 0.44304591862782194 0.0619156872000072 0.3132036635333 0.8018191094897221 0.016902267571150903 0.011038873805700972 1.7672999227681647e-10 9.752689741523216 -0.11089827804388075 SPVGKS(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_A549_PD325901_60min_R1 1 SPVGKSPPSTGSTYGSSQKEESAASGGAAYTK 32 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.001)PVGKS(0.996)PPS(0.003)T(0.001)GSTYGSSQKEESAASGGAAYTK 163.71 1.0792e-51 121210000.0 3555.1 4127.0 4406.6 3905.7 5244.6 5341.1 3754.3 3477.8 4600.6 5358.6 5550.0 True False 3916.0111348737055 4474.796773707759 4705.65837503844 4146.946218511719 4876.237388887776 5297.603852436065 3897.17194093179 3408.432550718679 4407.252781017461 5020.257081495604 4867.385184348707 0.8045410392967898 0.919343056739513 0.9667733694406789 0.85198644887329 1.0018186776274731 1.088388046516381 0.8006705434908499 0.700259466145939 0.9054662029192136 1.0314073966528194 1.0 12.248931232601105 -10.300384628852552 1.1358612918961157 0.9907259992038735 0.8981547440406782 0.16579051880960893 0.10175135170053878 0.754244683569082 1.9263160458922726 0.0416912228642809 0.018983154977715282 5.007435583312277e-11 10.300384628852552 -0.09257125516319531 SPVLSNTTTEPAS(ph)TMSPPPAKK ddPTM_A549_MK2206_60min_R1 1 SPVLSNTTTEPASTMSPPPAKK 22 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 SPVLSNTTTEPAS(0.333)T(0.333)MS(0.333)PPPAKK 65.071 0.00027673 3329300.0 285.35 373.99 343.66 413.4 556.76 429.7 368.61 290.46 661.4 713.91 734.29 True False 333.5101038623064 393.0244935595548 392.3961555766917 514.6830185582314 474.8613415355123 475.1705687882248 435.58166563487623 331.6335944964433 511.59395603876766 552.6372351679715 551.9455276269692 0.6042445987309606 0.7120711626187489 0.7109327568315609 0.9324887924557628 0.8603409535305555 0.860901203115405 0.7891750975999625 0.600844789742688 0.9268921124124534 1.0012532170411386 1.0 9.10838208195888 -4.235039036723185 0.06797508377387297 1.3051751339427675 3.668899880568261e-14 0.4532560353644627 0.10257044662283853 90.27994233310636 0.6960332773404612 3.333261530272844 12.672920443600315 5.820508975552025e-05 4.235039036723185 -1.3051751339427309 SPVLSNTTTEPASTMS(ph)PPPAKK ddPTM_A549_MK2206_60min_R1 1 SPVLSNTTTEPASTMSPPPAKK 22 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 SPVLSNTTTEPAS(0.113)T(0.124)MS(0.763)PPPAKK 92.833 3.5624e-07 4454900.0 1248.9 1292.2 1477.8 1179.6 1763.1 1403.7 1314.6 1124.1 2218.4 2035.3 2241.7 True False 1459.6837873265627 1357.9674605675466 1687.3742615120618 1468.6020529542568 1503.7503255644465 1552.2386022993512 1553.4458035419775 1283.4446174118711 1715.9359420568533 1575.524316422759 1685.0240222274274 0.8662688294479101 0.8059039174838909 1.0013947808776802 0.8715614932378928 0.8924207048257058 0.9211967199419818 0.9219131496347944 0.7616773413801485 1.0183450914774281 0.9350159378381317 1.0 10.718553443725803 -8.815426159753757 24.99997501439568 1.0086631004190807 0.8847130435607475 0.33166119626433066 0.06313298497459688 53.69422741505246 24864.21756853143 0.009697817600019842 0.010324116368833213 1.5295857897648656e-09 8.815426159753757 -0.12395005685833316 SPVLSNTTTEPASTMS(ph)PPPAKK ddPTM_A549_PD325901_60min_R1 3 SPVLSNTTTEPASTMSPPPAKK 22 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 SPVLSNTTTEPAS(0.061)T(0.159)MS(0.78)PPPAKK;SPVLSNT(0.001)T(0.002)T(0.002)EPAS(0.172)T(0.172)MS(0.652)PPPAKK;SPVLSNTTTEPAS(0.149)T(0.149)MS(0.701)PPPAKK 102.27 2.0455e-10 16139500.0 2595.8199999999997 3152.62 3087.81 3112.3199999999997 3916.6 2960.96 2529.71 2663.14 3264.11 3596.1900000000005 3618.56 True False 2859.345735458316 3418.3023515208506 3297.367355109937 3304.5609378084337 3641.5115275364883 2936.8469234631602 2625.9794983604265 2610.021583507086 3126.930807948289 3369.1259496703738 3173.500059941775 0.9010069895857438 1.0771395263763024 1.039031760777857 1.0412985269863406 1.1474748570205795 0.9254283497688175 0.8274710725572213 0.8224425820729219 0.985325586540452 1.0616435752429727 1.0 11.631859154532725 -7.303871754297041 24.945175685768493 0.9606625038433382 1.0430737555811702 0.2406835971005573 0.08670827532682433 655.6709029722728 385454.66325656924 0.01341434074313955 0.02144445016746517 4.967389851498175e-08 7.303871754297041 0.08241125173783204 SPVPSPGSSS(ph)PQLQVK ddPTM_A549_MK2206_60min_R1 2 SPVPSPGSSSPQLQVK 16 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SPVPSPGS(0.002)S(0.157)S(0.841)PQLQVK;SPVPSPGS(0.001)S(0.032)S(0.967)PQLQVK 182.57 5.4446e-34 30237000.0 4367.1 4794.200000000001 4481.1 3996.8 6644.799999999999 5053.700000000001 4778.6 4907.4 7233.0 6853.2 7447.3 True False 5104.1597146559625 5038.204302316153 5116.58736179571 4976.016179423172 5667.3587223133345 5588.479179625444 5646.809764799709 5603.038978282194 5594.737048727561 5305.057360245891 5597.929874976277 0.9117941504541611 0.9000120428156497 0.914014193830428 0.8889029142124185 1.0124025932599507 0.9983117517436082 1.0087317795890824 1.0009126772610633 0.9994296416139495 0.9476819965109643 1.0 12.450677699108171 -6.762866661541681 24.999999176921868 1.0011301219580429 0.9041568579978043 0.8594781998348808 0.017733067115149513 3.4652208842242422 60698.12397424284 0.0009524156619924706 0.001871570241710571 1.7263678455198998e-07 6.762866661541681 -0.09697326396023853 SPVPSPGSSS(ph)PQLQVK ddPTM_A549_PD325901_60min_R1 4 SPVPSPGSSSPQLQVK 16 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SPVPSPGS(0.015)S(0.087)S(0.898)PQLQVK;SPVPSPGSS(0.024)S(0.976)PQLQVK;SPVPSPGS(0.003)S(0.169)S(0.828)PQLQVK;SPVPSPGSS(0.316)S(0.683)PQLQVK 228.49 4.888600000000001e-55 49166000.0 13582.5 14409.3 14917.8 13740.8 16968.8 14982.100000000002 14152.900000000001 16753.1 16266.0 17196.0 15385.800000000001 True False 14961.385401091971 15623.622280442749 15930.211616018796 14589.538008379 15776.970027182033 14860.090744899422 14691.496354264045 16418.946277947296 15582.396586538704 16110.241625312288 13493.444138622051 1.1087892199641052 1.1578676370492782 1.180588992133004 1.0812315861314916 1.169232248275582 1.1012822665760806 1.0887877256046756 1.216809148892656 1.1548123982621663 1.1939310275276733 1.0 13.719971016013494 -10.672394039824102 0.8977330285018208 0.9983677483315392 1.1404322661705328 0.0 0.06930058501667445 0.30485975516005814 0.4300097043348583 0.028448767767665053 0.007228003414005492 2.1262090393557947e-11 10.672394039824102 0.14206451783899365 SPYEAENS(ph)GEELDQR ddPTM_A549_MK2206_60min_R1 1 SPYEAENSGEELDQR 15 0 R4GMT1;Q9NPC7-3;Q9NPC7-2;Q9NPC7 R4GMT1 MYNN Myoneurin 1 SPYEAENS(1)GEELDQR 133.66 1.2428e-22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SPYEAENS(ph)GEELDQR ddPTM_A549_PD325901_60min_R1 2 SPYEAENSGEELDQR 15 0 R4GMT1;Q9NPC7-3;Q9NPC7-2;Q9NPC7 R4GMT1 MYNN Myoneurin 1 SPYEAENS(1)GEELDQR;SPYEAENS(1)GEELDQR 211.7 1.9757e-45 15391600.0 2107.13 1742.16 1793.21 2123.8999999999996 2156.0099999999998 2008.9900000000002 2243.03 2236.5 2292.4 1996.1599999999999 2516.9 True False 2321.044286412879 1888.9779373110528 1914.9080140477195 2255.0884792731254 2004.5792954307158 1992.6294515185111 2328.3897340831127 2191.891252999692 2196.05840003574 1870.122116933202 2207.3372559436507 1.0515132112970285 0.8557722351782182 0.8675194553489671 1.0216329530980806 0.9081436423152045 0.9027299503748236 1.054840952742272 0.9930024272899994 0.9948902887959054 0.8472298974239498 1.0 11.108091358459635 -7.7480257628750255 24.995911474835967 1.0010126794646366 0.9306819364922597 0.038319261282103945 0.07410793630517323 233.1178435167056 434407.6213593166 0.008252291892161551 0.012202585636115657 1.78638160138718e-08 7.7480257628750255 -0.07033074297237685 SPYGGGRPGR ddPTM_A549_MK2206_60min_R1 2 SPYGGGRPGR 10 1 P46781 P46781 RPS9 40S ribosomal protein S9 0 ; 112.36 0.00013766 17953900.0 3184.1 3496.3 3141.8999999999996 3859.3 4271.9 3536.6000000000004 3154.9 2915.1 4577.2 4542.3 4477.0 False True 3721.4982362290866 3674.2467360952733 3587.468664396227 4804.828673250559 3643.509168951712 3910.8406645949194 3728.104492312934 3328.3243521193344 3540.4715082864345 3516.1912752356416 3365.2373410858672 1.1058650130835241 1.0918239528715372 1.0660373402485341 1.4277830019858797 1.0826901046379256 1.1621292254331759 1.1078281007989705 0.9890310889767371 1.0520718598540286 1.044856846293363 1.0 11.71649254246429 -8.050949288446418 3.5225098262854657 1.02272370293692 1.157565659395014 0.30776561098863087 0.09402603421665047 0.22154860636127993 5.554344141198152 0.014849743182520156 0.019895398194509778 8.893049538604853e-09 8.050949288446418 0.13484195645809405 SPYGGGRPGR ddPTM_A549_PD325901_60min_R1 2 SPYGGGRPGR 10 1 P46781 P46781 RPS9 40S ribosomal protein S9 0 ; 101.54 0.00042676 27498000.0 4327.0 4169.7 4009.7 4953.200000000001 5042.3 4959.200000000001 4420.3 9519.3 5530.1 4582.7 5776.6 False True 4766.273854630957 4521.095252563425 4281.822354284851 5259.147914466612 4688.146242990664 4918.813919417523 4588.5169353809715 9329.43009375361 5297.6891284407775 4293.347539911523 5066.114820884457 0.9408144156114582 0.8924186309251709 0.8451885726382565 1.0381027869298183 0.9253928125877324 0.9709242868204045 0.9057269915133694 1.841535461315275 1.0457104340789283 0.8474635281088987 1.0 12.306664060023472 SPYQEFTDHLVK ddPTM_A549_PD325901_60min_R1 2 SPYQEFTDHLVK 12 0 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 0 ; 95.417 0.00027857 8448900.0 1026.55 1164.44 980.8800000000001 1318.68 1349.21 1206.69 1142.51 1652.58 1229.07 1392.35 1492.77 False True 1130.7646002938318 1262.5714454025347 1047.4484153106032 1400.131868660428 1254.4461441218157 1196.8631167167944 1185.9888432554606 1619.6179954760692 1177.416462106057 1304.4367833800627 1309.168753448688 0.8637271530619001 0.964406950652157 0.8000866294366972 1.0694815813256462 0.9582004923485082 0.91421607303409 0.905909830288311 1.2371346254709927 0.8993618729475772 0.9963855155753144 1.0 10.354435359081796 -6.256569553526824 24.974379576629527 0.9724786164401763 0.8849069241907784 0.1994544205614307 0.09914201195220111 648.2225070152639 3324324.158879669 0.013608714330987768 0.034781199098262154 5.538988283233174e-07 6.256569553526824 -0.08757169224939787 SPYSSTEPLCSPS(ph)ESDSDLEPVGAGIQHLQK ddPTM_A549_PD325901_60min_R1 1 SPYSSTEPLCSPSESDSDLEPVGAGIQHLQK 31 0 I3L419;I3L156;Q9BSJ6-2;Q9BSJ6;I3L2R2 I3L419 FAM64A Protein FAM64A 1 SPYSSTEPLCS(0.046)PS(0.318)ES(0.318)DS(0.318)DLEPVGAGIQHLQK 96.887 4.6791e-10 4191700.0 900.06 1111.3 1156.2 1560.7 1048.1 1270.4 1027.5 1431.3 1290.0 909.93 998.2 True False 991.4334286108478 1204.9531511076889 1234.6666847954089 1657.1008943931276 974.4850717487082 1260.0542835997776 1066.602074769574 1402.7515986668714 1235.785786095839 852.4768645103744 875.427728111149 1.132513166735073 1.3764164789565605 1.410358211361851 1.892904281166124 1.1131530798679274 1.4393584337550185 1.218378217321159 1.6023613984600342 1.4116365593790479 0.9737832571852686 1.0 9.773844270090404 -10.578427134411282 0.7809041569017312 0.9878617839180671 1.4073935487436884 0.36300417778024574 0.2087123724764933 0.6113235337797902 0.6398229470065765 0.15438762906027695 0.03845771421663898 2.6398111906708703e-11 10.578427134411282 0.41953176482562127 SQAAPGS(ph)SPCR ddPTM_A549_MK2206_60min_R1 4 SQAAPGSSPCR 11 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SQAAPGS(0.5)S(0.5)PCR;SQAAPGS(0.5)S(0.5)PCR;SQAAPGS(0.5)S(0.5)PCR;SQAAPGS(0.617)S(0.383)PCR 84.71799999999999 0.0004936 44858300.0 1309.14 1751.3300000000002 1455.5 1581.94 2234.57 1928.7800000000002 1521.4 1783.3899999999999 2861.29 2725.49 2441.84 True False 1530.0908265999656 1840.4652164647584 1661.9117861894733 1969.515371015986 1905.8677131169793 2132.8822193794563 1797.8186866794192 2036.190993902817 2213.2123835412235 2109.7999160649874 1835.4637366444315 0.833626290758136 1.0027249134485603 0.9054451760663802 1.073034204759951 1.0383575959943832 1.1620399666837118 0.9794901695885125 1.1093605137769444 1.2058055625699184 1.1494642329039382 1.0 10.841928895977752 -5.784657276764657 0.7498763162826741 1.0961576429063116 0.8175103789080225 0.5391572411619759 0.07311035571758029 1.1113731787731986 0.6687098344470876 0.014327100969999888 0.2223043845709554 1.6418849546342e-06 5.784657276764657 -0.2786472639982891 SQAAPGS(ph)SPCR ddPTM_A549_PD325901_60min_R1 1 SQAAPGSSPCR 11 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SQAAPGS(0.696)S(0.304)PCR 101.56 0.00024673 20972000.0 1022.1 1013.5 1248.2 1137.1 947.48 930.71 1127.4 1101.1 993.01 956.4 1466.1 True False 1125.862839569749 1098.9112018785588 1332.9103580363499 1207.336084458529 880.9322734285531 923.130606335917 1170.3038239369516 1079.1376967037597 951.2772429852943 896.0127407797554 1285.7789943736293 0.8756270280478614 0.854665698138813 1.0366558824408862 0.938991918316947 0.6851350638666341 0.7179543377014201 0.9101904985678104 0.8392870792149351 0.7398450644690393 0.6968637259595692 1.0 10.328426971556743 SQAAPGSS(ph)PCR ddPTM_A549_PD325901_60min_R1 3 SQAAPGSSPCR 11 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SQAAPGS(0.179)S(0.821)PCR;SQAAPGS(0.287)S(0.713)PCR;SQAAPGS(0.388)S(0.612)PCR 120.59 1.179e-05 46412700.0 4384.530000000001 4514.63 4342.37 3629.28 3725.38 3676.57 3974.81 3779.8999999999996 2733.85 3647.55 4341.48 True False 4829.644257879612 4895.093714195362 4637.069340992073 3853.452382907087 3463.7221606632997 3646.6292328828968 4126.073569649491 3704.506929225812 2618.9557917194666 3417.2430705052207 3807.505482909228 1.2684536580599726 1.2856432475719333 1.2178759457619992 1.012067454716507 0.9097090407908616 0.9577475985921866 1.0836684512130637 0.97294854750814 0.6878403205130469 0.8975018121035464 1.0 11.894630398895405 -6.2328111495521545 0.6891287427706445 0.8711467972647641 1.373840011331274 0.6555026425307207 0.09996239302052208 0.6519960532960826 0.41791623193491184 0.02366201529388949 0.19850213375898684 5.850444320328488e-07 6.2328111495521545 0.50269321406651 SQAIVNQNAETELMLEGDDDAVS(ph)LLQEK ddPTM_A549_PD325901_60min_R1 2 SQAIVNQNAETELMLEGDDDAVSLLQEK 28 0 Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9 Q5T321 NBEA Neurobeachin 1 SQAIVNQNAET(0.109)ELMLEGDDDAVS(0.891)LLQEK;SQAIVNQNAET(0.077)ELMLEGDDDAVS(0.923)LLQEK 54.375 0.0014422 2133220.0 1214.01 1826.21 1584.9499999999998 1674.77 1589.37 1392.13 1365.39 1520.13 1248.83 1417.19 1441.73 True False 1337.255401493073 1980.1111257845519 1692.5142380786042 1778.2167392213619 1477.7381342288381 1380.79295483923 1417.350663620077 1489.8098146310845 1196.346018023308 1327.7083815408416 1264.40634987947 1.0576152212621734 1.5660401626212226 1.3385841017327567 1.4063649232628979 1.1687209055614944 1.0920484185885768 1.1209613616344036 1.1782682163634348 0.9461721053025003 1.050064626508247 1.0 10.304244470284946 -7.4909839312296915 0.7397113767911901 0.979074730355375 1.3651170564750439 0.46598396559990873 0.1313580995797001 0.32176598526545047 0.35033992358854626 0.024056393813160645 0.05446001814735803 3.22861357727192e-08 7.4909839312296915 0.38604232611966893 SQAKPGT(ph)PGGTGGPAPQY ddPTM_A549_MK2206_60min_R1 1 SQAKPGTPGGTGGPAPQY 18 1 Q96L35;P54760 Q96L35 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 1 S(0.003)QAKPGT(0.559)PGGT(0.438)GGPAPQY 93.37100000000001 1.5687e-05 4369500.0 1136.8 1069.8 1207.0 1183.3 1670.2 1254.0 1194.5 1078.4 2029.9 2275.1 2044.6 True False 1328.664047908429 1124.248250514751 1378.1707495229791 1473.208553120355 1424.515792500561 1386.6974476621692 1411.5251881415588 1231.2665024614912 1570.1308910842076 1761.1533298744275 1536.8693919106915 0.8645263253350278 0.7315184077659618 0.8967390181475262 0.9585775869274153 0.9268945038521142 0.9022871136357117 0.918441863421263 0.801152335352802 1.021642372050994 1.1459355877241448 1.0 10.58577885004919 -4.931644669969507 0.17764331168434092 1.0415688801699885 0.5792783186451683 0.4631976270345808 0.07737810979241905 12.609070426784513 0.3346408149509239 0.10157238187382454 1.3388261891745628 1.1704566408082126e-05 4.931644669969507 -0.4622905615248202 SQAKPGT(ph)PGGTGGPAPQY ddPTM_A549_PD325901_60min_R1 1 SQAKPGTPGGTGGPAPQY 18 1 Q96L35;P54760 Q96L35 EPHB4 Receptor protein-tyrosine kinase;Ephrin type-B receptor 4 1 SQAKPGT(0.937)PGGT(0.063)GGPAPQY 117.65 1.6935e-09 8714400.0 1673.0 1562.7 1814.1 2026.5 1933.5 2120.9 2152.5 2138.8 1893.0 2216.4 2468.0 True False 1842.8417284024952 1694.3942132961274 1937.2157350694943 2151.672302484575 1797.6976302128892 2103.6280935821537 2234.414565393197 2096.139956143859 1813.4437930848255 2076.456125746809 2164.45164594101 0.8514127501339062 0.782828397425103 0.8950145588617557 0.9940958055217357 0.8305556899753831 0.9718988629416052 1.0323236232065465 0.9684392626995129 0.8378305870152246 0.9593451208026667 1.0 11.079785855625692 -5.9346408084332065 5.412864223578848 0.933877886624963 0.819055981732861 0.381199300189068 0.06274760431900685 0.19648103214360088 11.027310767655633 0.010274062541122184 0.032964095420722844 1.1624096095050928e-06 5.9346408084332065 -0.11482190489210198 SQANGAGALSYVS(ph)PNTSK ddPTM_A549_MK2206_60min_R1 4 SQANGAGALSYVSPNTSK 18 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;F5H1Z4;A0A494C156;A0A494C1G3;A0A494BZU6;A0A494BZW7;A0A494C0P9;A0A494C1K5;A0A494C0Q2;A0A494C1N1 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 SQANGAGALS(0.006)YVS(0.994)PNTSK;SQANGAGALS(0.001)Y(0.003)VS(0.978)PNT(0.014)S(0.004)K;SQANGAGALS(0.004)YVS(0.995)PNT(0.001)SK;SQANGAGALSYVS(0.995)PNT(0.004)SK 253.31 1.4920999999999998e-86 68728000.0 8739.800000000001 9494.5 9356.2 8916.7 12765.8 10089.8 8929.900000000001 9576.9 15416.4 13962.4 14139.0 True False 10214.864572405075 9977.729495711626 10683.049848125012 11101.291900285876 10887.967730753006 11157.49593893282 10552.347239502129 10934.454903026193 11924.610014932061 10808.284142692059 10627.896083451667 0.9611370389959204 0.9388245253213952 1.0051895280345489 1.0445427592739938 1.0244706614798658 1.049831109687436 0.9928914581629027 1.0288447325009 1.1220104074502066 1.0169730732991704 1.0 13.375568406297255 -6.000109522584361 2.3214384982125558 1.0487391124681338 0.9483697099748437 0.428551216210179 0.0347920830668555 0.23449515855413453 2.464252274690368 0.006745473510447544 0.02617541990015016 9.997478467258865e-07 6.000109522584361 -0.10036940249329007 SQANGAGALSYVS(ph)PNTSK ddPTM_A549_PD325901_60min_R1 4 SQANGAGALSYVSPNTSK 18 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;F5H1Z4;A0A494C156;A0A494C1G3;A0A494BZU6;A0A494BZW7;A0A494C0P9;A0A494C1K5;A0A494C0Q2;A0A494C1N1 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 SQANGAGALS(0.002)YVS(0.997)PNTSK;SQANGAGALS(0.001)Y(0.001)VS(0.995)PNT(0.002)S(0.001)K;SQANGAGALSYVS(1)PNTSK;SQANGAGALS(0.004)YVS(0.994)PNT(0.002)S(0.001)K 244.52 8.160099999999999e-75 123123900.0 11358.400000000001 11066.7 11442.100000000002 12251.2 13829.599999999999 12220.7 12166.099999999999 12424.099999999999 13526.099999999999 14333.900000000001 14091.599999999999 True False 12511.496406387861 11999.329647587027 12218.62971293682 13007.928799506057 12858.256605529958 12121.178670960167 12629.087593045371 12176.291578982102 12957.645055279794 13428.85510776133 12358.42253401229 1.0123861983157063 0.9709434690845871 0.988688457552674 1.0525557581241638 1.0404448116369258 0.9808030626563228 1.0219012627451578 0.9852626049539142 1.0484869747428 1.086615631631225 1.0 13.593206984636675 -6.117389223088036 24.97091093700786 1.0204368941449695 0.9886923761955133 0.19078925310256478 0.03119247481369581 19.80367786245004 4156.719652729118 0.003627560499094413 0.009597656461974614 7.63151525889685e-07 6.117389223088036 -0.03174451794945621 SQAS(ph)PSEDEETFELR ddPTM_A549_MK2206_60min_R1 1 SQASPSEDEETFELR 15 0 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 SQAS(0.481)PS(0.481)EDEET(0.038)FELR 72.417 0.0011339 1310900.0 722.58 501.67 520.44 473.07 824.53 452.85 522.9 720.6 625.99 906.98 754.57 True False 844.5338386151235 527.2028601941815 594.2462177976299 588.9721712369196 703.2427292482865 500.7702864224987 617.9041614727677 822.747256744946 484.20426450061717 702.0925880750328 567.1894439274434 1.4889801770061835 0.9295004796697572 1.0477032394729258 1.0384046768547806 1.2398727387779935 0.882897754505034 1.089414071591593 1.4505687042550006 0.853690543229782 1.2378449486179905 1.0 9.147686872325277 SQAS(ph)PSEDEETFELR ddPTM_A549_PD325901_60min_R1 1 SQASPSEDEETFELR 15 0 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 SQAS(0.888)PS(0.112)EDEETFELR 82.90799999999999 0.00025684 2077700.0 588.44 611.57 582.13 515.79 774.21 752.58 846.05 424.86 490.74 856.37 690.69 True False 648.1779956133672 663.109150205102 621.6368424320624 547.6491768559182 719.8321604795038 746.451237997104 878.2468957263238 416.3858340037779 470.1159043943198 802.2986520509819 605.7395086446501 1.0700606223683078 1.0947100869956745 1.026244505369945 0.9041001437751522 1.1883526667925912 1.2322974271024492 1.4498755375745798 0.6874008184400033 0.7761024296503461 1.3244945072942913 1.0 9.242553702315712 -8.281748951535885 24.9919207936529 0.8758011637644391 1.1285626427977267 0.1390785893632389 0.20117480526304174 694.7543717131971 854926.8240068364 0.027434658781107065 0.03318683743011609 5.226982528729586e-09 8.281748951535885 0.2527614790332876 SQAS(ph)PSEDEETFELRDR ddPTM_A549_MK2206_60min_R1 1 SQASPSEDEETFELRDR 17 1 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 S(0.057)QAS(0.741)PS(0.202)EDEET(0.001)FELRDR 54.833999999999996 0.0033558 1103800.0 432.17 658.38 574.09 317.5 808.42 547.5 425.24 573.48 814.31 691.07 898.11 True False 505.10973045793935 691.8887298316528 655.5045945266332 395.28751425311685 689.5024889074982 605.4360865989132 502.5006036042832 654.7725462088424 629.8700851858616 534.9568070310404 675.0845004249788 0.7482170456290478 1.0248920385464269 0.9709963628463997 0.5855378311963549 1.0213573093048989 0.8968300801126072 0.7443521563418346 0.9699119825690715 0.933024065564157 0.7924294020885899 1.0 9.398924285588725 -9.037448381144822 0.8418659786992383 0.9841246342148662 0.8665725322131639 0.0 0.1394311919653597 0.7821114227795053 1.165883004562073 0.03247696146746378 0.02885564043542068 9.17384966357502e-10 9.037448381144822 -0.1175521020017023 SQAS(ph)PSEDEETFELRDR ddPTM_A549_PD325901_60min_R1 2 SQASPSEDEETFELRDR 17 1 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 S(0.12)QAS(0.547)PS(0.333)EDEETFELRDR;S(0.133)QAS(0.562)PS(0.305)EDEET(0.001)FELRDR 62.19 0.00089718 4593800.0 692.0799999999999 889.76 825.15 917.3000000000001 1075.54 1110.57 681.55 872.13 1124.1399999999999 1031.27 1197.24 True False 762.3394521176319 964.7431978129914 881.1496410300387 973.9595376605474 999.9977808115693 1101.5258861283096 707.48675820847 854.7346829772508 1076.8963051021522 966.155436202361 1049.9870699296664 0.7260465142382158 0.9188143601402776 0.8392004685248768 0.9275919347519092 0.9523905669415095 1.0490851913082087 0.673805210054502 0.8140430558202069 1.0256281586155993 0.9201593656454066 1.0 10.036155846588526 -8.771732070662908 24.980849142212147 1.0121021990195302 0.8687939873856505 0.19387674262236165 0.10291495363947624 183.05968780705427 444293.32128905854 0.017082112207092985 0.01828279126496921 1.6914841372915407e-09 8.771732070662908 -0.14330821163387975 SQASDDSS(ph)LGK ddPTM_A549_MK2206_60min_R1 2 SQASDDSSLGK 11 0 O75140;H0Y770;A0A2R8Y6V4;A0A5F9UWT1;A0A2R8Y5T1;A0A2R8Y5K9;A0A2R8Y721;A0A2R8Y6H3;O75140-6;A0A2R8Y842;A0A2R8Y7U0;O75140-8;O75140-5;O75140-1;O75140-4;O75140-9;A0A2R8YEW8;A0A2R8Y5P2;A0A2R8Y7U6;A0A2R8YF97;A0A2R8Y6H8;A0A2R8YF50;O75140-2;A0A2R8Y5E9 O75140 DEPDC5 DEP domain-containing protein 5 1 SQASDDS(0.112)S(0.888)LGK;SQASDDS(0.135)S(0.864)LGK 110.92 7.4657e-05 10294700.0 3300.4 4605.5 4583.9 4532.0 5617.3 4374.5 3804.5 4300.299999999999 6502.2 7049.3 6874.2 True False 3857.4268329670813 4839.900278319019 5233.96594758772 5642.340203449208 4791.002611192315 4837.406686441912 4495.728403754341 4909.880694116418 5029.462081879762 5456.858234048527 5167.146421731622 0.7465294222636669 0.9366679175112411 1.012931610680718 1.0919644505754762 0.9272047316179493 0.9361853316362561 0.8700601912201524 0.9502112565393516 0.9733538923393391 1.0560680477523254 1.0 12.335152050738209 -5.282138973039461 3.3673723556667534 0.9776712276710976 0.7213755032717986 0.5660336262358381 0.05853544890918142 0.15297857668858864 2.8993401353156774 0.007668729152819271 0.09770678981858469 5.222290503991288e-06 5.282138973039461 -0.25629572439929904 SQASDDSS(ph)LGK ddPTM_A549_PD325901_60min_R1 1 SQASDDSSLGK 11 0 O75140;H0Y770;A0A2R8Y6V4;A0A5F9UWT1;A0A2R8Y5T1;A0A2R8Y5K9;A0A2R8Y721;A0A2R8Y6H3;O75140-6;A0A2R8Y842;A0A2R8Y7U0;O75140-8;O75140-5;O75140-1;O75140-4;O75140-9;A0A2R8YEW8;A0A2R8Y5P2;A0A2R8Y7U6;A0A2R8YF97;A0A2R8Y6H8;A0A2R8YF50;O75140-2;A0A2R8Y5E9 O75140 DEPDC5 DEP domain-containing protein 5 1 SQASDDS(0.123)S(0.877)LGK 114.7 2.2307e-05 5662500.0 4096.9 4177.5 3983.4 3748.0 5090.9 4378.8 3825.5 4662.9 4395.3 5111.6 4816.0 True False 4512.814272021623 4529.552585937522 4253.737478130105 3979.5054476744053 4733.332746651564 4343.140504586512 3971.0814958939245 4569.894801525716 4210.580826067475 4788.852703648884 4223.662531139345 1.0684599535948904 1.0724229392246596 1.0071205847458289 0.9421930417818968 1.1206702031127316 1.028287765077419 0.9401985756714123 1.081974416240346 0.9969027579794966 1.1338151825205307 1.0 12.044278853235976 -2.0000000000000004 0.31612043257162403 1.0011426945135802 1.658692942863816 0.0 0.06533761821262857 70.93359975287669 0.8861339115276544 0.015011139358877844 27.303246973982958 0.00999999999999999 2.0000000000000004 0.6575502483502358 SQASPS(ph)EDEETFELR ddPTM_A549_MK2206_60min_R1 2 SQASPSEDEETFELR 15 0 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 SQAS(0.127)PS(0.873)EDEETFELR;SQAS(0.013)PS(0.987)EDEETFELR 210.09 2.3103000000000002e-45 11866400.0 1955.58 2501.79 2066.21 1718.8500000000001 2961.2 2379.77 2365.1099999999997 2704.0 2971.57 3294.1499999999996 2987.9900000000002 True False 2285.6340946593637 2629.1204249909315 2359.2296473669207 2139.968327162108 2525.611402677919 2631.595681836521 2794.8198725202833 3087.300280652697 2298.514139622196 2549.999227113465 2245.989618671246 1.0176512285090489 1.170584406595054 1.050418767635564 0.9527952887102562 1.1244982531006091 1.1716864850842028 1.2443601026854845 1.3745835042991785 1.0233859143935067 1.135356640081923 1.0 11.133135544045247 -8.962213969859096 24.9999408544073 1.0103169799259604 1.1385014633011064 0.06978520741549044 0.11356172249192617 184.06507032395297 121781.5697621328 0.019637730997703114 0.02085916736062592 1.0909027339126005e-09 8.962213969859096 0.12818448337514599 SQASPS(ph)EDEETFELR ddPTM_A549_PD325901_60min_R1 2 SQASPSEDEETFELR 15 0 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 SQAS(0.004)PS(0.996)EDEETFELR;SQAS(0.139)PS(0.861)EDEETFELR 292.66 1.9636999999999996e-123 14319300.0 3136.2 2953.6000000000004 2880.0 3215.9 3068.8 2747.7 2998.2 3560.2000000000003 3159.1 3352.1000000000004 3751.1 True False 3454.5847152515844 3202.510237660102 3075.4541188468893 3414.5388391611846 2853.2580747852676 2725.323642197031 3112.2981416779926 3489.1890180771325 3026.334013066176 3140.4478339270345 3289.738480182062 1.0501092217702361 0.9734847486973698 0.9348627975670231 1.0379362553379063 0.8673206371794518 0.8284317001533219 0.9460624789560022 1.0606280830821642 0.9199314873499279 0.9546192965932156 1.0 11.683757185236397 -5.284970704760982 3.2795349856964204 0.9553452405729564 1.0608161461281682 0.16350129072694308 0.06434539356098173 0.4614059849177243 8.080106804759403 0.009151740890121949 0.1188055263369551 5.188350356521271e-06 5.284970704760982 0.10547090555521177 SQASPS(ph)EDEETFELRDR ddPTM_A549_MK2206_60min_R1 2 SQASPSEDEETFELRDR 17 1 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 SQASPS(1)EDEETFELRDR;S(0.032)QAS(0.143)PS(0.824)EDEETFELRDR 201.61 7.125e-49 13529200.0 1538.5 1506.33 1769.75 1260.1399999999999 1489.85 1000.0 1312.1299999999999 1210.69 2084.67 2496.61 2785.98 True False 1798.1611872863452 1582.9957629443688 2020.7271615313089 1568.8743565698337 1270.6950385923606 1105.8193362537231 1550.5270365141755 1382.309015082625 1612.4955735339256 1932.6240670290504 2094.1442768636143 0.8586615579225702 0.7559153303970111 0.9649417109683284 0.7491720479352675 0.6067848584413066 0.5280530804257199 0.7404107986467815 0.6600829896748565 0.7700021394652661 0.9228705435346262 1.0 11.032145125376504 -10.231366938506572 0.8158647603289784 0.9896799554524393 0.7331674474982883 0.3649532248849515 0.1127529855506829 0.45280045640339806 0.5828590569200757 0.06309288472422633 0.02378135522344641 5.869931882198241e-11 10.231366938506572 -0.2565125079541509 SQASPS(ph)EDEETFELRDR ddPTM_A549_PD325901_60min_R1 2 SQASPSEDEETFELRDR 17 1 Q13829-2;Q13829 Q13829-2 TNFAIP1 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 1 S(0.037)QAS(0.143)PS(0.817)EDEET(0.002)FELRDR;SQAS(0.028)PS(0.972)EDEETFELRDR 123.19 1.4649e-10 20430500.0 1621.8400000000001 1367.24 1059.17 1046.1599999999999 1211.24 1342.27 1353.54 1134.13 1417.39 1426.1799999999998 1522.2 True False 1786.488002864495 1482.462113129197 1131.051645506619 1110.7789271982538 1126.166680951156 1331.3389981482007 1405.0497053855083 1111.5088874422272 1357.8220274064984 1336.1307514065977 1334.9790500208292 1.3382142609928007 1.110475938259905 0.8472429926813995 0.8320571975874248 0.8435837857781999 0.9972733265944723 1.0524882059861433 0.8326039928678167 1.0171111130060901 1.0008627112056556 1.0 10.382601386374008 -5.412159657494165 3.344558531375094 0.9680696834958653 1.3394224520275284 0.6485736697792853 0.0861267667164053 0.14157595433415446 2.6040447901352755 0.012893029814855107 0.10537779606962659 3.8711530550841484e-06 5.412159657494165 0.3713527685316631 SQATS(ph)PGQTNGDSSLEVLATR ddPTM_A549_MK2206_60min_R1 2 SQATSPGQTNGDSSLEVLATR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;A0A087WVI1;Q96JY6-4;C9J760;C9J0X3;C9K0F0;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 S(0.002)QAT(0.041)S(0.95)PGQT(0.005)NGDS(0.001)S(0.001)LEVLATR;S(0.005)QAT(0.026)S(0.967)PGQT(0.001)NGDSSLEVLATR 91.725 2.326e-06 3459700.0 1168.44 1569.25 1793.28 1042.4099999999999 1620.54 1405.69 1419.6399999999999 1300.35 1992.19 1787.95 2172.7 True False 1365.6441063846983 1649.1181221913191 2047.594069349269 1297.8004967955628 1382.1607127163566 1554.4391827784968 1677.5702118821948 1484.6785946548582 1540.9621458737113 1384.0508532147949 1633.158626530548 0.8361980791087315 1.0097721650558067 1.2537631287532307 0.7946567318770413 0.8463113688182227 0.9517992664807574 1.0271936752683932 0.9090841333697524 0.9435471367207623 0.8474687214891348 1.0 10.673449209422492 -5.800492585069819 0.0033005349223686024 1.9091832749465627 5.853046124252312e-08 0.0 0.12425691876059244 328822.85280622763 188.34738772145434 53317.90058049502 55648.63332720735 1.5830965954876157e-06 5.800492585069819 -1.9091832164161016 SQDAT(ph)FSPGSEQAEKS(ph)PGPIVSR ddPTM_A549_PD325901_60min_R1 1 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 S(0.003)QDAT(0.498)FS(0.498)PGSEQAEKS(1)PGPIVSR 219.07 2.8112999999999992e-74 84659000.0 13909.0 14920.0 15124.0 14186.0 15582.0 15957.0 15370.0 16573.0 16598.0 16906.0 18109.0 True False 15321.031440735374 16177.36076174456 16150.405588000138 15062.237001256428 14487.574074981763 15827.051482526496 15954.913760786716 16242.438513733015 15900.443781099795 15838.552274803997 15881.707802409133 0.964696720991888 1.0186159425052876 1.01691869595726 0.948401594378383 0.9122176440485896 0.9965585363638068 1.0046094512812078 1.0227135970395553 1.0011797206524489 0.99728268973702 1.0 13.955078437218619 -7.499940983466547 24.637961034234326 1.0027627376224102 0.973763212683449 0.23655241117513937 0.028330917598811938 871.8131615682886 936434.8823749584 0.004460571734091859 0.0070952606452607475 3.16270741314493e-08 7.499940983466547 -0.028999524938961185 SQDATFS(ph)PGSEQAEK ddPTM_A549_MK2206_60min_R1 2 SQDATFSPGSEQAEK 15 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDATFS(1)PGSEQAEK;SQDATFS(0.999)PGSEQAEK 329.08 9.580999999999997e-186 83376000.0 10692.2 11372.400000000001 12074.7 10588.5 15695.4 13958.7 13093.400000000001 12641.9 18908.9 19170.9 19395.3 True False 12496.781960807974 11951.206584552214 13787.074025903155 13182.682975335832 13386.62745157066 15435.80036896485 15472.301296285199 14433.92803919502 14626.064341308529 14840.180375231701 14578.911726951685 0.8571820856631893 0.8197598564547383 0.9456860898893655 0.9042295626885045 0.9182185681818158 1.058775898919057 1.0612795787549716 0.9900552462027301 1.0032343027545516 1.017920998026006 1.0 13.831595410275469 -6.576545940412909 1.0969183452091429 1.008016414685613 0.8515013419361279 0.7353215719933697 0.03893964483215405 0.21713539010492178 0.48977967745623285 0.006158354210000745 0.02259689148090044 2.651270622235226e-07 6.576545940412909 -0.15651507274948506 SQDATFS(ph)PGSEQAEK ddPTM_A549_PD325901_60min_R1 2 SQDATFSPGSEQAEK 15 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDAT(0.007)FS(0.992)PGS(0.001)EQAEK;SQDATFS(1)PGSEQAEK 300.29 3.374899999999999e-124 142232000.0 17548.0 15662.7 18755.7 17609.1 20192.6 17736.6 19405.7 18562.1 18765.3 18024.0 19071.0 True False 19329.460041845166 16982.650697250436 20028.574589186337 18696.77411383229 18774.34143668827 17592.159010150994 20144.194532706508 18191.86435381425 17976.65969908858 16885.96156400492 16725.387901029582 1.1556957695824372 1.0153815742715908 1.1974953709715406 1.1178678918819784 1.1225055913670354 1.0518236775284628 1.2044082117501425 1.0876796676682394 1.0748127221600625 1.0096005942538082 1.0 14.029752050290757 -9.647769870070954 0.6437856430689738 1.005118963405635 1.120495311420005 0.398901098041496 0.05351905125771527 0.4642567064598701 0.4147049751567554 0.023124498740034662 0.0121073902065982 2.2502466816103456e-10 9.647769870070954 0.11537634801436991 SQDATFS(ph)PGSEQAEKS(ph)PGPIVSR ddPTM_A549_MK2206_60min_R1 2 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 SQDAT(0.012)FS(0.988)PGSEQAEKS(1)PGPIVSR;SQDAT(0.008)FS(0.992)PGSEQAEKS(0.998)PGPIVS(0.002)R 206.58 4.443399999999999e-62 103882000.0 8099.7 8447.1 7238.5 6085.799999999999 9804.4 7922.5 6611.6 7019.6 9776.8 10274.3 9931.3 True False 9466.731341347555 8877.021309518746 8265.028144508771 7576.8212732019465 8362.185747810143 8760.853691470124 7812.842138063395 8014.649796623405 7562.370410341434 7953.32849418875 7465.084120063897 1.2681345834943551 1.189138818363746 1.107158072377894 1.0149679697296021 1.1201730098841227 1.1735773570084211 1.046584608077601 1.0736181492024237 1.0130321760227805 1.0654037337385922 1.0 12.86594280207686 -2.0000000000000004 0.21756723544738674 0.992447129909479 2.29672996819779 0.5750167825923471 0.05257843748012598 20.153303029631427 0.2328819142300887 0.033266043240088125 9.327103513854105 0.00999999999999999 2.0000000000000004 1.304282838288311 SQDATFSPGSEQAEKS(ph)PGPIVSR ddPTM_A549_MK2206_60min_R1 2 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDATFSPGSEQAEKS(1)PGPIVSR;SQDATFSPGSEQAEKS(1)PGPIVSR 264.36 2.979899999999999e-124 265770000.0 19334.3 21445.6 19690.6 17736.2 22342.8 16631.2 16220.099999999999 16514.5 24562.0 24425.4 24395.0 True False 22597.45716174872 22537.0894384363 22483.023165333176 22081.56979620828 19056.20371732819 18391.102545102916 19167.082213624857 18855.48094853514 18998.746217454223 18907.685175822957 18337.048232251458 1.232338862587709 1.2290467447643918 1.226098272773789 1.204205252477381 1.0392187159006252 1.002947819745404 1.0452654086339548 1.0282724192965722 1.0360853053785921 1.0311193457280574 1.0 14.162473802374135 -6.754989862852107 3.859795547028441 1.0197526855119978 1.227399501678554 0.9818671946134679 0.012900073061236172 0.023865505170787376 0.7790218155847339 0.0023544024138506176 0.004880574543352329 1.7579646472676132e-07 6.754989862852107 0.20764681616655611 SQDATFSPGSEQAEKS(ph)PGPIVSR ddPTM_A549_PD325901_60min_R1 2 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDATFSPGSEQAEKS(1)PGPIVSR;SQDATFSPGSEQAEKS(1)PGPIVSR 235.14 1.5092999999999997e-98 423870000.0 27758.0 27620.0 28801.0 29703.0 31549.0 30388.0 32088.0 32251.0 33898.0 37122.0 36240.0 True False 30575.97172564043 29947.634332398437 30755.609054482407 31537.68684959257 29333.107078141424 30140.5302031093 33309.12639922735 31607.728504579933 32473.38494347036 34778.11058471985 31782.70974428779 0.9620316194447756 0.94226183271805 0.9676836651730119 0.9922906858267723 0.922926563346707 0.9483310405440294 1.048026636722311 0.9944944518225257 1.0217311615258577 1.0942462384274965 1.0 14.955954511409873 -7.7416249954329395 24.999803452089576 1.0116640612935708 0.9559881228459726 0.5426965837453728 0.032341282098937364 116.61261251886428 147129.81417971285 0.00312977650226718 0.004638449507280584 1.812904823888389e-08 7.7416249954329395 -0.05567593844759822 SQDDGGENRS(ph)RDHDYR ddPTM_A549_PD325901_60min_R1 1 SQDDGGENRSRDHDYR 16 2 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 S(0.001)QDDGGENRS(0.991)RDHDY(0.008)R 46.027 0.006863500000000001 2159100.0 267.42 164.85 229.74 400.02 429.03 376.47 178.15 380.81 303.18 314.0 439.05 True False 294.56828153580113 178.74248804112534 245.33153793884884 424.72832688866504 398.8964128731499 373.40415313823075 184.9295957374206 373.21444581033415 290.4383989368502 294.17398641242494 385.0496333672611 0.7650137956496671 0.4642063582245783 0.6371426348167721 1.1030482568556514 1.035961025036691 0.9697558984092763 0.48027469632995184 0.9692632156186511 0.7542882105794125 0.763989784485371 1.0 8.588900612718819 -6.100823674804994 8.343861302498162 0.8874749740679319 0.5989124194960309 0.3066424235319595 0.17560756830528884 0.26340541623556485 19.617533037869794 0.024576732651135177 0.06537403309085574 7.928231543312688e-07 6.100823674804994 -0.28856255457190094 SQDQDS(ph)EDDDLEEGEVKDPSDRK ddPTM_A549_MK2206_60min_R1 1 SQDQDSEDDDLEEGEVKDPSDRK 23 2 H3BPD0 H3BPD0 ZC3H18 1 S(0.029)QDQDS(0.97)EDDDLEEGEVKDPS(0.001)DRK 51.29600000000001 0.0018184999999999998 3659400.0 1973.0 1680.6 1106.5 1275.3 2108.9 1197.0 1192.1 1804.9 1935.7 2833.5 3167.8 True False 2305.994164781254 1766.1353615770145 1263.4183383158036 1587.748557250392 1798.683603642937 1323.6657454957074 1408.6891392076618 2060.750102274428 1497.2670406777181 2193.410382048783 2381.1478331677035 0.968438050195955 0.7417159644504214 0.5305921458202975 0.6667996565077475 0.7553851040193926 0.5558939798100649 0.5916008739926263 0.8654439987176092 0.6288005388921462 0.9211567427675549 1.0 11.217441477532878 -10.84120589850825 0.8487200002696793 1.0209625419427242 0.6895073487266937 0.3769486646919905 0.1271431360945891 0.524870791128493 0.5979598514810979 0.11842625329105144 0.022551642957474444 1.4414318083619838e-11 10.84120589850825 -0.33145519321603045 SQDQDS(ph)EVNELSR ddPTM_A549_MK2206_60min_R1 3 SQDQDSEVNELSR 13 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 SQDQDS(0.989)EVNELS(0.01)R;SQDQDS(1)EVNELSR;SQDQDS(1)EVNELSR 143.38 2.261e-12 22840700.0 2018.9099999999999 1965.83 1841.7600000000002 1476.7 2657.3100000000004 2360.79 1775.74 1791.89 3080.49 3009.12 2708.62 True False 2359.652650389518 2065.8823502611826 2102.949262337564 1838.4915662915823 2266.4232191172728 2610.607230834427 2098.3689724491346 2045.8958949329756 2382.7639335316976 2329.3577020753983 2035.9948998909995 1.1589678591610648 1.0146795310596226 1.032885329157823 0.9029941904029373 1.1131772575847856 1.2822268027165442 1.0306356723002963 1.0048629763475863 1.1703192054455849 1.144088181262195 1.0 10.991518232170401 SQDQDS(ph)EVNELSR ddPTM_A549_PD325901_60min_R1 4 SQDQDSEVNELSR 13 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 SQDQDS(1)EVNELSR;SQDQDS(0.998)EVNELS(0.002)R;SQDQDS(1)EVNELSR;SQDQDS(1)EVNELSR 148.72 1.1236e-12 47303700.0 3227.46 3446.88 3140.87 3176.2799999999997 3642.41 2781.68 3064.69 3627.0699999999997 3238.4800000000005 3345.51 3995.96 True False 3555.1093632695233 3737.360674426414 3354.0283257856354 3372.471601744733 3386.5796872323376 2759.0269203430644 3181.318455012715 3554.7252434686297 3102.3779477175613 3134.273927651691 3504.482252477488 1.0144463881237362 1.0664515911827754 0.9570681442071822 0.9623309118944945 0.966356637942224 0.7872851741202498 0.9077855802418993 1.0143367799781615 0.8852599968295859 0.894361478200074 1.0 11.774985602804612 -5.866386979545579 4.947866092996874 0.9386342109474236 1.0398770092507603 0.3215785592262035 0.06101644068625068 0.2023399321228466 7.923466844525585 0.009090660054471775 0.030048808272852837 1.3602321029607542e-06 5.866386979545579 0.10124279830333671 SQDS(ph)PGESEETLR ddPTM_A549_MK2206_60min_R1 2 SQDSPGESEETLR 13 0 Q8IWU2 Q8IWU2 LMTK2 Serine/threonine-protein kinase LMTK2 1 S(0.001)QDS(0.996)PGES(0.003)EETLR;S(0.001)QDS(0.998)PGESEETLR 138.05 1.0625e-08 6980300.0 1404.6100000000001 1975.13 1424.42 1090.4099999999999 1848.22 1286.49 1290.4899999999998 1169.1399999999999 2172.65 1999.42 2136.5 True False 1641.6738285825627 2075.65568053767 1626.4241748430163 1357.5604989503652 1576.3492863222286 1422.625517897053 1524.9553286268729 1334.869175341086 1680.5482440091148 1547.749633342502 1605.948085599723 1.0222458890814632 1.292479937022709 1.0127501563885526 0.8453327421498806 0.981569267684988 0.8858477622368407 0.9495670142147812 0.831203192251756 1.0464524096876602 0.9637606889169847 1.0 10.649209541241857 -5.942208473173381 11.11920425958523 0.9797109320007698 1.156616477281778 0.41143021479824027 0.0911893034420973 0.4580296854461315 85.93621679938832 0.012910378706199882 0.04018851069424294 1.1423298537318704e-06 5.942208473173381 0.17690554528100821 SQDS(ph)PGESEETLR ddPTM_A549_PD325901_60min_R1 1 SQDSPGESEETLR 13 0 Q8IWU2 Q8IWU2 LMTK2 Serine/threonine-protein kinase LMTK2 1 S(0.003)QDS(0.986)PGES(0.009)EET(0.002)LR 93.823 0.00017446 3234200.0 714.38 630.86 583.22 1070.2 1135.4 1202.9 742.34 1218.6 1038.6 1072.5 862.29 True False 786.9033317012401 684.0247862033629 622.8008163867655 1136.3038233994525 1055.6534209173592 1193.1039812202243 770.5901549240347 1194.2940670267938 994.95125382879 1004.7821669660054 756.2337965066753 1.0405556262312512 0.9045149652966151 0.8235559151993918 1.50258270477789 1.3959352594314276 1.5776919607819893 1.0189840211898447 1.5792656616825134 1.3156662111966422 1.3286660442940628 1.0 9.562688515380025 -6.241649893467054 24.96416754962637 1.2406651410577316 0.9210394295038151 0.3924370602520999 0.2057003218896139 848.1543456530295 1069933.8524030612 0.03250351026378251 0.08586861720823324 5.732579767279457e-07 6.241649893467054 -0.3196257115539165 SQDSPGES(ph)EETLR ddPTM_A549_PD325901_60min_R1 1 SQDSPGESEETLR 13 0 Q8IWU2 Q8IWU2 LMTK2 Serine/threonine-protein kinase LMTK2 1 S(0.01)QDS(0.331)PGES(0.658)EETLR 151.56 5.201600000000001e-13 4526500.0 2001.2 1791.7 1798.2 2331.4 2196.4 2519.7 2133.8 1723.9 3012.7 2316.0 2396.1 True False 2204.3603507944235 1942.6928469716966 1920.236665455027 2475.4052830064315 2042.1324411686514 2499.180398603871 2215.0029266601628 1689.5154621266126 2886.086695946461 2169.767364748966 2101.394890129357 1.0489986252220915 0.9244777628883017 0.9137914413301069 1.1779819655191277 0.9717985185749369 1.1892959340212477 1.0540631544620405 0.8039971306976054 1.3734147301408923 1.0325367092785689 1.0 11.037131580656354 -7.067704614982665 0.6415201970387011 1.1509602266990253 0.9677057220416656 0.0 0.15333333353223422 1.4330224360240014 1.0742113609192934 0.035981616992221174 0.12566946093840164 8.556484835950468e-08 7.067704614982665 -0.1832545046573597 SQDSVSSPS(ph)PQKQK ddPTM_A549_PD325901_60min_R1 2 SQDSVSSPSPQKQK 14 1 I3L4X5;Q70CQ4 I3L4X5 USP31 Ubiquitin carboxyl-terminal hydrolase 31 1 S(0.001)QDS(0.029)VS(0.024)S(0.024)PS(0.922)PQKQK;SQDS(0.001)VS(0.005)S(0.023)PS(0.971)PQKQK 55.864 0.0042269 5755600.0 2578.5 2823.1 3325.0 3803.5 3842.2 4727.3 3570.5 3849.5 3546.1000000000004 3513.0 4729.700000000001 True False 2840.267421808627 3061.0125446703123 3550.654494849275 4038.433556624759 3572.3371268704227 4688.80243613132 3706.3773313525703 3772.7187026256706 3397.0697488949277 3291.1885804676704 4147.976884038575 0.6847355954990934 0.7379531348038838 0.8559966928726633 0.9735911432304893 0.8612239717672451 1.1303829715574942 0.8935385695167972 0.9095322389917604 0.8189702700530613 0.7934442916333917 1.0 12.018192138944412 -5.800281122907132 2.4192251971117322 0.9258107584580828 0.6922365401696655 0.4616162077209117 0.08774844093230888 0.197877779597107 2.2430098567265397 0.012504478094793188 0.060579465698584585 1.5838676081464537e-06 5.800281122907132 -0.2335742182884173 SQDSYPGS(ph)PSLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 2 SQDS(0.001)YPGS(0.636)PS(0.373)LS(0.99)PR;S(0.018)QDS(0.092)Y(0.003)PGS(0.886)PS(0.016)LS(0.986)PR 111.43 1.0514000000000001e-05 5861100.0 1092.01 1729.02 1691.52 1329.23 2021.9 1787.15 1705.55 1700.0300000000002 2301.83 2453.42 2151.6 True False 1276.3145909187917 1817.0197327584729 1931.4029711956161 1654.8914096714025 1724.481188394735 1976.265026785841 2015.4263580032111 1941.0144586235238 1780.4691802671864 1899.190718025808 1617.2983388609225 0.7891645964452739 1.1234907556006122 1.194215640236124 1.0232443637065485 1.0662727753800219 1.22195452706502 1.2461685698772766 1.2001585681406173 1.1008909967230824 1.174298317379974 1.0 10.659370118262913 -4.0322331835987555 13.587023189114689 1.0806698904043526 0.5287080464526774 0.0 0.12810438943299954 0.0 0.0 0.016553072273532893 0.0 9.284677353110794e-05 4.0322331835987555 -0.5519618439516751 SQDSYPGS(ph)PSLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 2 SQDS(0.001)YPGS(0.998)PS(0.038)LS(0.962)PR;S(0.001)QDS(0.002)YPGS(0.981)PS(0.052)LS(0.965)PR 117.4 3.8057e-06 7132500.0 1752.12 1923.31 1919.87 2275.4 2321.2 2181.1000000000004 1696.0 2234.4 2109.8 2472.8999999999996 2392.1 True False 1929.9939325574285 2085.3940835570315 2050.163923316175 2415.946290191662 2158.1669197052793 2163.3378447413993 1760.54220808681 2189.833139147109 2021.1324430271336 2316.7606719722467 2097.8868647712693 0.919970454540147 0.9940450643816773 0.9772518993962539 1.1516094269721595 1.0287337014908964 1.0311985269888546 0.8391978793759979 1.0438280423600748 0.9634134599758295 1.104330605656774 1.0 11.034721162751515 SQDSYPGS(ph)PSLSPR ddPTM_A549_MK2206_60min_R1 1 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 S(0.008)QDS(0.04)YPGS(0.941)PS(0.011)LSPR 95.34700000000001 5.0367e-05 4709500.0 1610.0 1824.6 1771.9 1764.8 2375.8 1972.2 1186.3 1923.6 2736.8 3017.3 2598.6 True False 1881.7286392791784 1917.4643465032843 2023.182063860618 2197.1760792248833 2026.322967203229 2180.8968949595915 1401.8353542840769 2196.276190777933 2116.9191697715455 2335.689834394141 1953.2959022885275 0.9633607673443132 0.9816558485873738 1.0357785840282623 1.1248557254692544 1.0373865858363505 1.1165215123855026 0.7176769032493507 1.1243950228967994 1.0837677831051165 1.1957685631028008 1.0 10.931694802462108 -5.6990148722019365 4.468283916963637 1.0350106758041846 0.968675465757694 0.04925255700301556 0.11790447815133843 0.5204173374092994 20.237922822893424 0.014072304675289731 0.058169577369962484 1.999793386514585e-06 5.6990148722019365 -0.06633521004649057 SQDSYPGS(ph)PSLSPR ddPTM_A549_PD325901_60min_R1 1 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 SQDS(0.001)YPGS(0.542)PS(0.457)LS(0.001)PR 134.88 2.7953e-28 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SQDSYPGSPS(ph)LSPR ddPTM_A549_MK2206_60min_R1 1 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 SQDS(0.001)YPGS(0.333)PS(0.666)LSPR 149.22 2.437e-13 5044300.0 1625.5 2295.0 2142.6 2347.9 2584.7 2119.5 2287.9 2236.4 3578.2 3108.5 2915.3 True False 1899.8446603405607 2411.8056972624363 2446.4528980347413 2923.135605401236 2204.494053931386 2343.784083189767 2703.5818149427146 2553.416548687757 2767.743413211248 2406.287691052988 2191.3505518131847 0.8669743226470891 1.1006024094441853 1.116413298643833 1.3339424871947356 1.0059979002936459 1.0695614543508132 1.2337514017123803 1.1652250465243859 1.2630308787980726 1.0980843247840737 1.0 11.097604576342375 -5.239442121252043 2.808652462274991 1.1383118042929565 0.808932404507295 0.3901768704817775 0.0986786730960994 0.44955680274310905 4.6144842961770935 0.016048477296510436 0.34639187942725064 5.761796013264311e-06 5.239442121252043 -0.32937939978566155 SQDSYPGSPSLS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 SQDSYPGSPS(0.008)LS(0.992)PR 128.28 1.1765000000000001e-08 10923000.0 3907.8 4578.6 3181.3 3044.4 4857.6 4650.4 4195.0 3924.7 5844.0 5019.9 5909.7 True False 4567.3411034628425 4811.631183218211 3632.456176849587 3790.278136668309 4143.0534748238115 5142.502241314316 4957.177199040466 4481.03824388966 4520.343330950344 3885.901103528038 4442.15839057743 1.0281806054351745 1.0831741599814395 0.8177232456534287 0.8532514609807995 0.9326667602875056 1.1576584599555104 1.1159388664653378 1.0087524689337286 1.0176006646991151 0.8747777008065928 1.0 12.117045119516058 SQDVAVS(ph)PQQQQCSK ddPTM_A549_MK2206_60min_R1 2 SQDVAVSPQQQQCSK 15 0 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK 278.72 4.1011999999999987e-106 80673000.0 4371.5 5205.4 5262.700000000001 5164.0 7657.6 6422.7 6158.6 6530.5 9042.7 9219.6 8819.1 True False 5109.30232708629 5470.332625938949 6009.029994626823 6429.180231820769 6531.177183961379 7102.345850956791 7277.537901790374 7456.218373817473 6994.542888224622 7136.885956709713 6629.074075222331 0.7707414744667686 0.8252031224670665 0.906465959867146 0.9698458878067586 0.9852321922865723 1.0713933454904994 1.0978211767148331 1.1247752384736174 1.0551312006556564 1.0766037422006558 1.0 12.694591658714527 -6.003106146915294 1.0168704484531847 1.042389315540731 0.7529976116573566 0.8778775678397891 0.03812042915853035 0.2402861759142524 0.36551571460189425 0.007056918044483855 0.05665540022134047 9.928733482992385e-07 6.003106146915294 -0.28939170388337454 SQDVAVS(ph)PQQQQCSK ddPTM_A549_PD325901_60min_R1 2 SQDVAVSPQQQQCSK 15 0 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK 283.83 1.9410999999999997e-106 99052000.0 9576.0 9868.2 10008.5 8867.4 11284.8 9108.2 11169.9 10629.6 8357.9 10753.0 10842.2 True False 10548.148470521397 10699.827846450913 10687.73699599969 9415.11915867343 10492.194578446546 9034.02583901408 11594.976656903804 10417.58428924012 8006.646528380164 10074.05374488154 9508.678134368569 1.1093180693955476 1.1252697478293014 1.123998188283341 0.9901606748726749 1.103433561445635 0.9500821997919053 1.2194099424813245 1.0955870145174398 0.8420357083536777 1.0594589071712768 1.0 13.215029080896093 -8.743744868179128 24.957303461050266 0.9254057534277711 1.0888044479133725 0.2563681116387718 0.08515575218644189 158.45320639572873 223490.9492479884 0.014174947995827879 0.016055696625395476 1.8040772577621973e-09 8.743744868179128 0.1633986944856014 SQEATEAAPS(ph)CVGDMADTPR ddPTM_A549_PD325901_60min_R1 1 SQEATEAAPSCVGDMADTPR 20 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;Q9UHD8-3;K7ER14;K7EJL9 Q9UHD8 SEPT9 Septin-9 1 SQEAT(0.001)EAAPS(0.846)CVGDMADT(0.153)PR 61.211999999999996 0.00082848 1350400.0 587.2 263.74 292.23 459.23 335.79 374.4 355.4 345.21 436.89 464.47 280.11 True False 646.8121117262069 285.96629539561036 312.06248512174545 487.59559411299836 312.20526881261213 371.35101053192415 368.9249414823424 338.3245157379938 418.52903262590047 435.1432849330537 245.65824576358864 2.6329753748574443 1.1640818101046464 1.270311461159181 1.9848533583612749 1.2708926901361397 1.511657015125383 1.501781225928726 1.3772162000358146 1.7037043935772282 1.7713359613901078 1.0 7.940508855171748 -10.884301139661153 0.833189934919929 0.9498552941335687 1.5802090168818406 0.0 0.4548487350177095 0.8759565909900037 0.9305548854589287 0.37762847117576204 0.06618607095448503 1.3052655035697772e-11 10.884301139661153 0.6303537227482718 SQEDEIS(ph)SPVNK ddPTM_A549_MK2206_60min_R1 1 SQEDEISSPVNK 12 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.5)S(0.5)PVNK 219.95 2.188e-32 133680000.0 11543.0 12409.0 11106.0 10140.0 13849.0 10728.0 10328.0 11992.0 13895.0 14871.0 14461.0 True False 13491.176200745069 13040.565096875629 12680.997799670416 12624.3004552019 11811.83044565936 11863.229839329944 12204.463912202606 13691.902723959749 10747.80468575549 11511.630771641954 10869.934596703757 1.2411460327310697 1.1996912199297043 1.1666121527093505 1.1613961742723036 1.0866514734358408 1.091380056962569 1.1227725248598586 1.2596122453314242 0.9887644300099742 1.0590340419465623 1.0 13.408055639390751 -8.019095018976067 0.3353964650775071 0.9711631871642721 1.2261278857522153 0.3681645298522488 0.06837298590447415 0.7904036822173777 0.22355043190831275 0.04114586445882726 0.07210900722464327 9.569846704034e-09 8.019095018976067 0.25496469858794324 SQEDEIS(ph)SPVNK ddPTM_A549_PD325901_60min_R1 1 SQEDEISSPVNK 12 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.783)S(0.217)PVNK 258.09 3.2078e-63 167800000.0 29328.0 30673.0 29953.0 28672.0 36514.0 30728.0 32633.0 31500.0 31487.0 32498.0 33076.0 True False 32305.356969867527 33257.92135690285 31985.790702021146 30443.004321163433 33949.38260646156 30477.761355835944 33874.86667246278 30871.707788728036 30163.710888992016 30446.070733856628 29007.861686039236 1.1136759172226505 1.1465140628724475 1.1026593772478968 1.0494742649650353 1.1703510921937605 1.0506724585805693 1.167782273616049 1.0642531367138248 1.0398460670925311 1.0495799746766432 1.0 14.824156330767979 -8.758319248591954 1.5962019733944057 1.0147661388267961 1.112751931989698 0.45038288459191345 0.04024112853017176 0.18373660438391134 0.9180263336201467 0.007106096215773218 0.007634564804796866 1.7445392757855406e-09 8.758319248591954 0.09798579316290179 SQEDEISS(ph)PVNK ddPTM_A549_MK2206_60min_R1 1 SQEDEISSPVNK 12 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.303)S(0.697)PVNK 73.219 0.0014889 119490000.0 4464.8 4853.7 3740.9 3361.5 5691.6 5099.7 4600.4 4891.0 6578.5 5163.0 5900.3 True False 5218.3490861202945 5100.7325981711065 4271.415871491722 4185.06765090347 4854.373179616928 5639.346869093113 5436.233131457866 5584.314228059301 5088.480253705826 3996.6747141407723 4435.092670004233 1.176604295421704 1.1500847846244076 0.9630950668473057 0.9436257508683524 1.0945370346934138 1.271528531350334 1.2257315767547823 1.259120077879674 1.1473221942171885 0.9011479604860112 1.0 12.114748534207317 -3.7973640555528254 1.7268814711474934 1.0959494531083 12.204622479556074 0.036915838971860016 0.12336881924597318 541.2688614642644 16.35407936789127 0.01760576447589801 23227.663337648493 0.00015945419319483595 3.7973640555528254 11.108673026447773 SQEDEISS(ph)PVNK ddPTM_A549_PD325901_60min_R1 1 SQEDEISSPVNK 12 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.002)S(0.998)PVNK 276.15 3.541699999999999e-92 128450000.0 42119.0 41828.0 41661.0 43116.0 49333.0 40111.0 42181.0 44811.0 41278.0 43728.0 44300.0 True False 46394.889873630986 45352.99235537878 44488.365987944584 45779.177396459374 45868.02026961077 39784.349314759645 43786.22103732887 43917.209451450566 39543.22920811167 40967.006617332845 38851.38084083743 1.1941632155546047 1.1673456997880338 1.1450909858313714 1.1783153238234458 1.1806020603879803 1.0240137790145558 1.1270183990810523 1.1303899243984745 1.0178075618498228 1.0544543264797333 1.0 15.245678254806018 -8.099083250481646 0.47742325595084256 0.9953226330820273 1.1844543169920583 0.6083532160154675 0.04345263410179663 0.32632165562883764 0.16589524211196133 0.013410830540257985 0.021751758700060447 7.96006748208807e-09 8.099083250481646 0.189131683910031 SQEDEISS(ph)PVNKVR ddPTM_A549_MK2206_60min_R1 2 SQEDEISSPVNKVR 14 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.159)S(0.841)PVNKVR;SQEDEIS(0.119)S(0.881)PVNKVR 133.86 1.7897000000000001e-09 42283000.0 6405.6 9027.0 9320.6 7310.6 9956.099999999999 5868.200000000001 5286.1 3420.6 12250.8 13630.3 15147.2 True False 7486.708678115962 9486.435742565585 10642.401232811824 9101.697328185306 8491.57087876592 6489.169029004102 6246.515945613301 3905.4805251481603 9476.013360507612 10551.205763345522 11385.732198547217 0.6575517979485976 0.8331862700737002 0.9347138196496279 0.7993949944955365 0.7458080631695709 0.5699386667316925 0.5486266352207314 0.3430153157516288 0.8322708803669843 0.9267041925236764 1.0 13.474939451458463 -9.20288896658018 2.6919236627976493 0.9397652052312482 0.6886414614675346 0.3213725560900086 0.1552795632629077 0.22892757702547883 3.428702445933527 0.03402830068464712 0.032004171640632066 6.267740876958305e-10 9.20288896658018 -0.2511237437637136 SQEDEISS(ph)PVNKVR ddPTM_A549_PD325901_60min_R1 2 SQEDEISSPVNKVR 14 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.019)S(0.981)PVNKVR;SQEDEIS(0.002)S(0.998)PVNKVR 123.36 3.5814e-07 58270000.0 9189.7 9803.0 10180.7 12316.2 9728.5 15917.599999999999 13328.5 14385.5 11190.599999999999 13630.1 12543.5 True False 10122.631578900426 10629.133213631492 10871.623523522409 13076.943701880338 9045.203721503018 15787.972343063468 13835.72336113505 14098.569917293575 10720.297998359769 12769.493159872582 11000.729019797835 0.9201782500671445 0.9662208017761743 0.9882639145057498 1.188734281005011 0.8222367540573458 1.435175097454915 1.2577096787163033 1.281603236651008 0.9745079602512362 1.1607860839851187 1.0 13.42531151406269 -6.013254889051773 22.01478406041372 1.0598490243752736 0.9517100112044307 0.06312191799942557 0.17176160505644053 304.5468763313991 505833.1824502768 0.02516597053190639 0.07030557037526633 9.699405384410493e-07 6.013254889051773 -0.10813901317084296 SQEEPKDTFEHDPS(ph)ESIDEFNK ddPTM_A549_MK2206_60min_R1 1 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SQEEPKDTFEHDPS(0.824)ES(0.176)IDEFNK 89.039 8.5822e-07 2170600.0 740.19 806.99 934.81 783.38 1113.0 851.7 756.12 613.64 1068.2 1212.0 1088.5 True False 865.1159760919593 848.062344067021 1067.3801146326223 975.3081351672652 949.2791743821851 941.8263286872959 893.4972166241903 700.6253491936844 826.2544055648805 938.2083582294433 818.1954089282931 1.0573464072905576 1.0365034254810215 1.3045540258295043 1.192023475718062 1.1602108298622589 1.151101947542018 1.0920340139704898 0.8563056472186676 1.0098497211651962 1.1466800571007216 1.0 9.676301631748952 -8.018114456257832 12.07010800680328 0.9927219890306207 1.1517560181891913 0.3640742149368976 0.09040105124715579 0.6668391849928688 443.3608626258759 0.012479255148096306 0.016423818553981607 9.591478193296947e-09 8.018114456257832 0.15903402915857057 SQEEPKDTFEHDPS(ph)ESIDEFNK ddPTM_A549_PD325901_60min_R1 1 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SQEEPKDTFEHDPS(0.957)ES(0.043)IDEFNK 103.86 2.8031999999999997e-10 6145900.0 1524.0 1332.5 1262.6 1805.9 1628.4 1613.9 1481.0 1404.1 1588.2 1688.2 1647.3 True False 1678.7153580904962 1444.7944514091566 1348.2876286305845 1917.4463415035239 1514.0268016750276 1600.7569334868392 1537.3602654342958 1376.094124004859 1521.4534771142728 1581.606763889986 1444.6925430950673 1.1619879718449058 1.0000705397937966 0.9332695977941801 1.3272348851442415 1.0479923973521872 1.1080260233484864 1.0641435596675122 0.9525169425023506 1.0531330589239114 1.0947704904059363 1.0 10.496546778254332 -8.008934804646286 21.97133236908057 1.0197763429395457 1.0923534221081883 0.1003119516983616 0.09895238533873146 147.01117113808132 361516.34288858715 0.014705356454740182 0.019736675347444485 9.796370353761449e-09 8.008934804646286 0.07257707916864264 SQEEPKDTFEHDPSES(ph)IDEFNK ddPTM_A549_MK2206_60min_R1 3 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SQEEPKDTFEHDPSES(1)IDEFNK;SQEEPKDTFEHDPS(0.003)ES(0.997)IDEFNK;SQEEPKDTFEHDPS(0.006)ES(0.994)IDEFNK 177.6 5.618999999999999e-41 48111700.0 6502.0 7015.8 6644.7 6570.6 8658.3 6303.0 5680.0 7421.0 9788.5 9522.1 10885.900000000001 True False 7599.378641362243 7372.874253095338 7587.018375605078 8180.397294965444 7384.675539580651 6969.979276407216 6711.9824768891185 8472.94947585935 7571.420379022496 7371.050996614342 8182.630594444191 0.9287207278453995 0.901039606761833 0.9272101786870938 0.9997270682755417 0.9024818430144785 0.8518017764531206 0.8202719650385284 1.0354798958677518 0.9253039461616791 0.9008167864279621 1.0 12.998349007468759 -10.452525085980986 0.501504536349405 1.010347871878253 0.91615505616592 0.0 0.06305162722988748 1.6383319982323317 0.6365357035473123 0.07290287122287845 0.014585102173944077 3.527564099009036e-11 10.452525085980986 -0.09419281571233307 SQEEPKDTFEHDPSES(ph)IDEFNK ddPTM_A549_PD325901_60min_R1 3 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SQEEPKDTFEHDPSES(1)IDEFNK;SQEEPKDTFEHDPS(0.001)ES(0.999)IDEFNK;SQEEPKDTFEHDPS(0.03)ES(0.97)IDEFNK 221.29 1.5365999999999996e-87 122798100.0 11326.8 11743.8 11869.2 11608.1 14497.0 11698.300000000001 13124.099999999999 13415.5 13668.500000000002 14298.599999999999 14356.7 True False 12476.688397650545 12733.491240869687 12674.715287297757 12325.105973092115 13478.780731934958 11603.032923359007 13623.544807283075 13147.917328243839 13094.060478489144 13395.783955785653 12590.916914619655 0.9909277046506061 1.0113235856623346 1.0066554622865314 0.9788886748018407 1.0705162160417705 0.9215399483643969 1.0820137166868609 1.0442382725103552 1.0399608358375612 1.0639244184219376 1.0 13.620095728532275 SQEMVHLVNKES(ph)SETPDQFMTADETR ddPTM_A549_PD325901_60min_R1 2 SQEMVHLVNKESSETPDQFMTADETR 26 1 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 SQEMVHLVNKES(0.45)S(0.45)ET(0.1)PDQFMT(0.001)ADETR;S(0.001)QEMVHLVNKES(0.333)S(0.333)ET(0.333)PDQFMTADETR 71.472 3.6633e-05 12568000.0 4677.1 4590.299999999999 4275.2 4204.0 5103.3 5454.2 5001.2 5203.6 5560.799999999999 5041.299999999999 5291.9 True False 5151.915748900962 4977.14069065925 4565.340780866052 4463.671532023264 4744.86181342924 5409.78280353425 5191.523402761651 5099.810115854772 5327.098914202903 4722.991457646357 4641.029848118002 1.110080287673679 1.072421607604516 0.9836913207350644 0.9617847068648657 1.0223726131288176 1.1656427518405184 1.1186145257968727 1.0988531172500027 1.1478269023335654 1.017660220298215 1.0 12.18022926068632 SQEPIPDDQKVS(ph)DDDKEK ddPTM_A549_MK2206_60min_R1 2 SQEPIPDDQKVSDDDKEK 18 2 E5RJU9;Q86UE4;H0YBJ8 E5RJU9 MTDH Protein LYRIC 1 SQEPIPDDQKVS(1)DDDKEK;SQEPIPDDQKVS(1)DDDKEK 165.62 7.701e-24 59101000.0 11423.2 10296.0 10334.5 11005.2 15099.9 14153.8 12296.3 15032.7 15593.0 13147.3 13542.9 True False 13351.156889573851 10820.022422228334 11800.087498711866 13701.474494042206 12878.724712716583 15651.545721467939 14530.378544114732 17163.631260712955 12061.210396904298 10177.315798803593 10179.824164974716 1.3115311888697059 1.062888930779013 1.1591641768540482 1.3459441216268038 1.2651225113521958 1.5375064900747049 1.4273702874072012 1.6860439809723948 1.1848151993040104 0.9997535943518795 1.0 13.313425021659537 -9.238721793281375 2.3676382792194985 1.0635908970601928 1.340605799974864 0.37447150393934225 0.1661229043655511 0.23250801881958583 2.6863872919915717 0.03621101558401973 0.0334356172347222 5.771360552656547e-10 9.238721793281375 0.2770149029146711 SQEPIPDDQKVS(ph)DDDKEK ddPTM_A549_PD325901_60min_R1 4 SQEPIPDDQKVSDDDKEK 18 2 E5RJU9;Q86UE4;H0YBJ8 E5RJU9 MTDH Protein LYRIC 1 SQEPIPDDQKVS(1)DDDKEK;SQEPIPDDQKVS(1)DDDKEK;SQEPIPDDQKVS(1)DDDKEK;SQEPIPDDQKVS(1)DDDKEK 228.29 6.874199999999999e-65 1208873000.0 112076.2 115653.0 116907.0 113853.1 130499.0 102199.5 113828.0 115282.4 111142.3 125370.0 120999.0 True False 123454.09331786216 125399.48419423864 124841.01203890034 120885.54740784923 121333.2004371099 101367.22115613628 118159.78682907137 112983.00209470668 106471.37563875935 117454.11680422207 106116.89007585762 1.1633783578618921 1.1817108860295178 1.1764480842744052 1.139173484272242 1.143391974174657 0.9552411598537609 1.113487087160252 1.0647032910024108 1.0033405197103715 1.1068371558972379 1.0 16.695294775264177 -7.090943519488491 0.5608123957208769 1.0006874375485115 1.199044894958321 0.45985073626925566 0.05494462325076967 0.38942940235718376 0.21717127044142526 0.009482234616808792 0.03507888250910072 8.110665311577831e-08 7.090943519488491 0.19835745740980948 SQEPIPDDQKVS(ph)DDDKEKGEGALPTGK ddPTM_A549_MK2206_60min_R1 2 SQEPIPDDQKVSDDDKEKGEGALPTGK 27 3 E5RJU9;Q86UE4;H0YBJ8 E5RJU9 MTDH Protein LYRIC 1 SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK 182.96 3.4105e-58 908173700.0 19956.9 22832.1 21357.0 18112.9 29776.4 22152.5 21795.7 21531.9 32303.9 29642.3 28921.3 True False 23325.13682064015 23994.156366215964 24385.743742802188 22550.56131311899 25396.331004558575 24496.66284636061 25755.696561889443 24584.1127636782 24987.118228728094 22946.08384252855 21739.343022726545 1.072945801363721 1.1037203995140152 1.12173324268857 1.0373156764463576 1.1682198021351875 1.1268354715573297 1.1847504561183912 1.1308581284161947 1.14939619852386 1.0555095348806294 1.0 14.408020721378513 -10.78214752559392 1.0008178804603922 0.9991234754049293 1.123565305478954 0.40674357308603537 0.042082775771563205 0.32141397245720854 0.5650882904629569 0.028588836033476 0.0070017621392655174 1.651400738238907e-11 10.78214752559392 0.12444183007402476 SQEPIPDDQKVS(ph)DDDKEKGEGALPTGK ddPTM_A549_PD325901_60min_R1 5 SQEPIPDDQKVSDDDKEKGEGALPTGK 27 3 E5RJU9;Q86UE4;H0YBJ8 E5RJU9 MTDH Protein LYRIC 1 SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;S(0.001)QEPIPDDQKVS(0.999)DDDKEKGEGALPTGK 197.58 3.769499999999999e-69 327907500.0 27506.700000000004 39950.1 26570.500000000004 55290.4 36764.4 40330.200000000004 30515.2 33340.6 60260.0 39047.0 41300.0 True False 30299.159934637708 43316.83513188815 28373.733911396303 58705.562434390886 34182.19537429467 40001.764222635196 31676.472634558148 32675.595577805285 57727.48175979482 36581.5657561973 36220.36182227055 0.8365228399239205 1.1959249701711772 0.7833641764989314 1.6207889562907412 0.9437287109947454 1.1043999068512784 0.8745487632064864 0.9021333287099932 1.5937853421525001 1.0099723999362331 1.0 15.144513337670444 -8.729468535790915 24.99997501306602 1.2803989503848547 1.0435663789467444 0.051447753956131326 0.26614681571468646 308.0255060785656 240864.04946607703 0.048830591065070525 0.05536640770734473 1.8643672449373e-09 8.729468535790915 -0.23683257143811032 SQEPIYSEEAS(ph)GPRSPLDMVSSR ddPTM_A549_MK2206_60min_R1 1 SQEPIYSEEASGPRSPLDMVSSR 23 1 Q5T011-5;Q5T011 Q5T011-5 SZT2 Protein SZT2 1 S(0.003)QEPIY(0.001)S(0.007)EEAS(0.534)GPRS(0.453)PLDMVS(0.001)S(0.001)R 55.04600000000001 0.0015145 1767400.0 662.99 1052.7 762.9 621.32 1010.8 844.28 812.26 1244.6 1477.9 1271.5 1251.6 True False 774.8865034507471 1106.277933554756 871.0906916413255 773.5434278921151 862.112658998663 933.6211492122935 959.8371279362594 1421.0258614276433 1143.1580097213407 984.2672669048986 940.7931775972916 0.8236523413464195 1.175899187938521 0.9259109359891613 0.8222247421773204 0.9163678899122418 0.9923766152266167 1.0202424409449955 1.510455108801731 1.2151002334443712 1.0462100388723443 1.0 9.877733787914305 -8.009820815807705 24.650604673649497 1.1412825427758966 0.9509298330921936 0.3514634764230913 0.15304516644439703 461.7349539216743 1158973.6111876082 0.02638958966123549 0.035336129011610325 9.776404993705484e-09 8.009820815807705 -0.190352709683703 SQEPIYSEEASGPRS(ph)PLDMVSSR ddPTM_A549_MK2206_60min_R1 3 SQEPIYSEEASGPRSPLDMVSSR 23 1 Q5T011-5;Q5T011 Q5T011-5 SZT2 Protein SZT2 1 SQEPIY(0.003)S(0.017)EEAS(0.051)GPRS(0.826)PLDMVS(0.081)S(0.021)R;SQEPIY(0.005)S(0.007)EEAS(0.057)GPRS(0.683)PLDMVS(0.196)S(0.052)R;SQEPIYS(0.009)EEAS(0.193)GPRS(0.796)PLDMVSSR 62.683 0.00022917 12607300.0 3798.33 3538.42 3277.39 3782.7799999999997 4745.4 3346.9 3544.2200000000003 3057.45 5031.700000000001 4968.6 5312.6 True False 4439.395243747382 3718.5104641862063 3742.1731837440902 4709.561269815445 4047.3579461933655 3701.0667365075856 4188.158896873232 3490.8529005479263 3892.027983973797 3846.189809157436 3993.3347996990788 1.1117012387946827 0.931179240084357 0.937104793724304 1.1793554775748674 1.0135283288790005 0.9268110294149348 1.0487873186062022 0.8741698544311843 0.9746310237416317 0.9631523531278341 1.0 11.96337831671748 -7.00934993525731 24.806199206447175 0.9791191895095154 1.033699363447199 0.1582466881928124 0.07772686983353042 751.4502859289298 1993670.479321042 0.010833321735051462 0.019709535543305866 9.787010736407737e-08 7.00934993525731 0.05458017393768355 SQEPS(ph)PVGSR ddPTM_A549_MK2206_60min_R1 2 SQEPSPVGSR 10 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 S(0.006)QEPS(0.84)PVGS(0.154)R;S(0.033)QEPS(0.77)PVGS(0.197)R 47.288000000000004 0.033463 125057000.0 899.5699999999999 1018.55 1012.07 898.16 1069.48 1019.0600000000001 1007.23 918.9100000000001 1453.33 1324.1399999999999 1673.98 True False 1051.3954236250752 1070.3898444211993 1155.5967443825364 1118.2092403199347 912.1609087315895 1126.896252802719 1190.2306532037012 1049.16830654385 1124.1530754911134 1025.0158543448306 1258.2845665023272 0.8355784149428576 0.850673903913944 0.9183906209664212 0.8886775456749326 0.7249241809165133 0.8955813993134872 0.9459153238382344 0.8338084519785847 0.8934013063642186 0.8146137063367811 1.0 10.29724251550823 -10.37886696602789 0.4019515958100688 1.0298587767541958 0.8539359319117503 0.0 0.0773902223385712 1.2450350904699927 0.3081231838147021 0.09077960537190197 0.018133847745777327 4.1795837690252366e-11 10.37886696602789 -0.17592284484244547 SQEPS(ph)PVGSR ddPTM_A549_PD325901_60min_R1 2 SQEPSPVGSR 10 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 SQEPS(1)PVGSR;SQEPS(1)PVGSR 128.57 1.4427000000000002e-06 171997000.0 2531.4 2797.3999999999996 2699.5 2668.54 3206.7 3059.9 2506.1 2695.7 3060.5 2814.2 3309.0 True False 2788.3858644818147 3033.146715476152 2882.704303412215 2833.3696551059375 2981.47245451444 3034.9811889066136 2601.4710068905392 2641.932148764259 2931.877828175441 2636.5109317256242 2902.0139774792556 0.9608450841797321 1.0451868044105015 0.9933461126593837 0.9763459711407235 1.0273804597950984 1.0458189424514268 0.8964364152202418 0.9103788504351352 1.010290732893756 0.9085107625896922 1.0 11.502838752788813 SQEQLAAELAEYTAK ddPTM_A549_MK2206_60min_R1 2 SQEQLAAELAEYTAK 15 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 202.89 2.4319999999999994e-38 2664300.0 2873.8 3098.3 2941.8 2212.61 4289.3 2890.8 2737.7 2826.3 3886.6000000000004 3981.0 3925.1000000000004 False True 3358.8271823357163 3255.9902360907217 3358.9914755150767 2754.699549327837 3658.3496520013514 3196.7025372422627 3235.1046526372047 3226.9366801807396 3006.2913056248494 3081.6893350754212 2950.38934275098 1.1384352341796027 1.1035798526355831 1.138490919433403 0.9336732306521011 1.2399548761216241 1.08348497973546 1.0965009281184404 1.0937324892761113 1.0189473172451693 1.0445025984950227 1.0 11.52668963432042 -8.76841841778184 2.9429702527977777 1.0076573590339344 1.1038154020364876 0.2177663596714019 0.06863174037987196 0.22537387251504418 3.881311702391512 0.011260084625739117 0.012210672146853733 1.7044394681976718e-09 8.76841841778184 0.09615804300255326 SQEQLAAELAEYTAK ddPTM_A549_PD325901_60min_R1 2 SQEQLAAELAEYTAK 15 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 197.14 5.2985e-38 5408600.0 4597.200000000001 4916.7 4612.0 5169.9 5428.5 5437.0 5760.2 5888.1 5077.200000000001 5232.6 6236.1 False True 5063.904359720231 5331.047564160149 4924.998054208978 5489.232981305207 5047.220887308337 5392.722874631605 5979.4075631023825 5770.657226374911 4863.822940438604 4902.212742998896 5469.099233894949 0.9259119542641487 0.9747578780653275 0.9005135660523613 1.0036813644348377 0.9228614569704633 0.9860349289714843 1.0933075644421988 1.0551385117701002 0.8893279738452865 0.8963473751979572 1.0 12.417087523931492 -6.264123238018448 24.71358691659262 0.9687199536245368 0.9378308111850308 0.07923293953960364 0.06181564520555001 634.4439224532588 5842174.7943489645 0.009659252744195532 0.023426911339229622 5.443481634099374e-07 6.264123238018448 -0.030889142439506023 SQES(ph)LTSQESEDTYL ddPTM_A549_PD325901_60min_R1 1 SQESLTSQESEDTYL 15 0 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 S(0.013)QES(0.882)LT(0.105)SQESEDTYL 93.823 2.3615e-05 2000000.0 322.42 132.18 335.67 305.02 435.33 301.3 377.07 285.01 257.88 330.41 377.26 True False 355.151841046941 143.31927248575033 358.4505847476862 323.8603926493189 404.7539226069703 298.84631269569655 391.41960519062116 279.3252519639803 247.0422004018567 309.54785621187676 330.85941164817893 1.0734222105931615 0.4331727236405462 1.083392438383607 0.9788459425591239 1.223341118182751 0.9032425923959398 1.1830390534782163 0.844241518089267 0.7466681971391229 0.9355872775988494 1.0 8.370074508909386 -3.457598681180935 9.527940482775762 0.9155475094381996 0.8150681823785138 0.0 0.21263863750109935 0.0 0.0 0.027332650449819095 0.0 0.0003486593521227208 3.457598681180935 -0.10047932705968587 SQESGGTESAANPT(ph)PSPIR ddPTM_A549_MK2206_60min_R1 2 SQESGGTESAANPTPSPIR 19 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 SQESGGTES(0.006)AANPT(0.987)PS(0.006)PIR;SQESGGTESAANPT(0.977)PS(0.023)PIR 132.79 1.3736e-16 16350700.0 948.75 1523.6 962.7 1412.4099999999999 1586.84 1587.77 1293.58 1256.0700000000002 1969.9299999999998 1749.4099999999999 1548.0500000000002 True False 1108.8758052895155 1601.1447321782339 1099.2253360114094 1758.4505134054934 1353.4179380742378 1755.7867675235739 1528.6067416292656 1434.121769053046 1523.744000331796 1354.2170659819874 1163.6264609935183 0.9529482548400833 1.375995464052233 0.94465481222632 1.5111812702369343 1.163103438640157 1.5088920941385795 1.3136575979237552 1.2324588836082118 1.3094786440579953 1.1637901950302338 1.0 10.184412293629642 -10.750261948422773 0.916862593996091 0.9940437260626055 1.26631501514795 0.09476152908626767 0.18394493691158717 0.6702350640326207 0.9649791322377211 0.12449270413799343 0.02915769840454486 1.777207149042161e-11 10.750261948422773 0.2722712890853446 SQESGGTESAANPT(ph)PSPIR ddPTM_A549_PD325901_60min_R1 2 SQESGGTESAANPTPSPIR 19 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 SQESGGTESAANPT(1)PSPIR;SQESGGTESAANPT(1)PSPIR 188.1 1.3524999999999999e-43 18980300.0 1797.2 1540.9 1553.43 2004.58 2095.97 1976.52 1858.16 2275.06 2037.39 2201.5 2281.4 True False 1979.6504209712875 1670.757050789021 1658.8551013334466 2128.398353868505 1948.7562979039612 1960.4238764331171 1928.8732956241683 2229.6821435499573 1951.765583514576 2062.4969142896603 2000.8022629861514 0.9894283196265006 0.8350435631232516 0.8290949745616758 1.0637724642973563 0.9739874519111585 0.9798189019974566 0.9640499370214473 1.114394053224534 0.9754914913988606 1.0308349567795025 1.0 10.966362879039435 -6.256874288077729 24.999854237130442 0.9978422432135318 0.8795744129824498 0.47145330905624117 0.0588980016651035 253.20128194086138 1386601.3000014354 0.007606566982012878 0.01940344374956455 5.535103064498324e-07 6.256874288077729 -0.118267830231082 SQESGGTESAANPT(ph)PSPIRK ddPTM_A549_MK2206_60min_R1 2 SQESGGTESAANPTPSPIRK 20 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 SQESGGTESAANPT(1)PSPIRK;SQESGGTESAANPT(1)PSPIRK 202.15 3.2373e-55 105837000.0 4565.9 4684.9 4020.5 4993.3 7007.8 5719.700000000001 4909.9 4706.7 8683.1 8103.7 8682.3 True False 5336.512294462607 4923.341399174195 4590.667355805416 6216.658724157755 5976.961903176525 6324.95485757042 5801.965275224976 5373.889138664222 6716.39171406142 6273.068541735923 6526.2452907102615 0.8177002329438687 0.7543911054312181 0.7034163062090188 0.9525628362462586 0.9158347008017597 0.9691567778755777 0.8890204117034557 0.8234273919053651 1.029135653791901 0.9612063694058939 1.0 12.672037497197726 -6.4393682901086855 0.34658061248670435 1.0185820085019168 0.6743632201223573 0.46158718535816323 0.07343630683458434 1.6522995468755353 0.24031501861713256 0.02715601589411155 0.2131901966802993 3.636065599632182e-07 6.4393682901086855 -0.34421878837955955 SQESGGTESAANPT(ph)PSPIRK ddPTM_A549_PD325901_60min_R1 2 SQESGGTESAANPTPSPIRK 20 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 SQESGGTESAANPT(0.999)PS(0.001)PIRK;SQESGGTESAANPT(1)PSPIRK 185.96 5.750299999999999e-44 162883000.0 26167.0 25260.0 25750.0 26760.0 25856.0 29041.0 26159.0 25619.0 29907.0 31436.0 31324.0 True False 28823.45457687272 27388.748849977714 27497.549847328977 28412.904423630484 24039.963758357626 28804.499724512847 27154.495059754052 25108.008947283288 28650.11279439402 29451.125595098674 27471.346579196183 1.0492188467637942 0.9969933134154764 1.000953839960384 1.0342741787964385 0.8750922962241278 1.0485288604791674 0.988466108913566 0.9139708122752661 1.0429089346530434 1.0720670539463748 1.0 14.745640009130106 SQESLT(ph)SQESEDTYL ddPTM_A549_PD325901_60min_R1 1 SQESLTSQESEDTYL 15 0 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 S(0.009)QES(0.32)LT(0.661)S(0.009)QESEDTYL 150.11 6.2499e-14 1965600.0 382.07 670.64 414.29 657.22 380.16 356.03 353.6 330.06 619.05 504.57 564.31 True False 420.8574651349318 727.1571864112851 442.4062107281522 697.8149867450837 353.45887308080256 353.1306097213705 367.0564414973447 323.47669437293905 593.0334813043642 472.71136408954527 494.9034474558233 0.8503829732818721 1.4692910104979489 0.893924285640873 1.410002274852557 0.7141976377369111 0.7135343500570221 0.7416728321135999 0.6536157629045687 1.1982811684844856 0.9551587618143255 1.0 8.951003281707054 -6.757678638445774 24.990338610000375 0.9835951179209442 1.1595725596997646 0.14304278087987876 0.24952616994620797 199.78595686854638 1327569.9919572223 0.038668109585410095 0.07813515350671152 1.747114473613803e-07 6.757678638445774 0.17597744177882035 SQESLTS(ph)QESEDTYL ddPTM_A549_MK2206_60min_R1 1 SQESLTSQESEDTYL 15 0 B5MD46;Q9BXI6;Q9BXI6-2 B5MD46 TBC1D10A TBC1 domain family member 10A 1 SQES(0.001)LT(0.113)S(0.885)QESEDTYL 75.462 0.00067089 1993900.0 397.22 701.19 599.09 342.56 740.97 719.73 422.54 461.82 963.36 983.25 687.84 True False 464.2610249034011 736.8775759753581 684.049970448816 426.4872153781027 631.9742945570239 795.8913508818921 499.3100485536491 527.2843992644337 745.160498169802 761.1331421032179 517.030344581752 0.8979376738109283 1.4252114671750067 1.3230364090180688 0.8248785005512712 1.2223156748531945 1.5393513344477348 0.9657267775212737 1.019832597429028 1.44123165299436 1.4721247023111013 1.0 9.014105144769323 -5.223630180563347 22.126212619927415 1.1999745054120419 0.8979343062901657 0.13499838278012888 0.2299866350248183 6996.308114259702 4093933.2932476588 0.031516138871111814 8.390569214084856 5.975439029658421e-06 5.223630180563347 -0.3020401991218762 SQET(ph)PEKPR ddPTM_A549_MK2206_60min_R1 2 SQETPEKPR 9 1 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 J3QQY0;Q68DK7 MSL1 Male-specific lethal 1 homolog 1 S(0.011)QET(0.989)PEKPR;S(0.001)QET(0.999)PEKPR 60.161 0.0032515 104441000.0 4538.3 5061.700000000001 4714.700000000001 4347.2 6454.6 4438.0 4075.5 4521.1 6333.4 7079.1 7339.700000000001 True False 5304.254089217825 5319.318909731273 5383.3153544125835 5412.264195153223 5505.13689035692 4907.626214294023 4815.9655958735175 5161.9797702880605 4898.895012361556 5479.926393351525 5517.049924585202 0.9614294163953255 0.9641600098681734 0.9757597679918271 0.9810069274586352 0.9978406876154602 0.889538119353343 0.8729240557371982 0.9356413012115643 0.8879555340855246 0.9932711264641189 1.0 12.4296813203489 -7.238487013172225 24.914328162057352 0.9351265674560902 0.9756398392586411 0.25351145033408096 0.038867613352160116 1229.6416306296553 1334752.0790927992 0.00718383913845493 0.012436256367376509 5.7744814004693964e-08 7.238487013172225 0.04051327180255082 SQET(ph)PEKPR ddPTM_A549_PD325901_60min_R1 1 SQETPEKPR 9 1 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 J3QQY0;Q68DK7 MSL1 Male-specific lethal 1 homolog 1 S(0.001)QET(0.999)PEKPR 77.597 0.00075242 109340000.0 3871.8 3853.1 3452.0 4169.4 3800.5 4217.8 4239.1 4464.8 4016.6 4522.4 4744.3 True False 4264.862285731485 4177.814259455627 3686.2734785623165 4426.934368605568 3533.5659910132294 4183.451635207132 4400.42127022453 4375.746061432158 3847.7962701027504 4236.854892202389 4160.781176595599 1.0250148000383539 1.004093722341333 0.8859570648169652 1.0639671207673889 0.8492554260939132 1.005448606319182 1.0575949763897479 1.0516645494470453 0.92477736915044 1.0182835175362512 1.0 12.02263870096071 -5.534941866484775 24.999943699011343 0.97267157160968 1.0197845960700362 0.010372356454172671 0.06793080668259387 420.894482158812 872276.8730629627 0.008864736660032596 0.03439285631904163 2.917817559233568e-06 5.534941866484775 0.047113024460356256 SQGAGSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SQGAGSSPR 9 0 M0R0Q5;M0R1G8;M0R398;Q96IQ9;Q96IQ9-2 M0R0Q5 ZNF414 Zinc finger protein 414 1 SQGAGS(0.043)S(0.957)PR 62.633 0.0070917 5999500.0 955.13 1349.6 967.32 744.59 1061.3 753.31 424.33 523.27 885.56 1166.5 1457.1 True False 1052.0940944704573 1463.3355284216116 1032.9681521677 790.5816332134169 986.7579492862371 747.1752931191343 440.47811035228534 512.8329693526259 848.3429928178542 1092.846990923864 1277.8859373179278 0.8233082967315766 1.1451221785043757 0.8083414348668162 0.618663692999641 0.7721799892072368 0.5846963890120993 0.34469282233184 0.40131357140448537 0.6638644092119728 0.8551991684152734 1.0 10.31954335333379 -5.962104012426435 10.032037700463148 0.7352399676228468 0.982961234839635 0.225333885970188 0.20068587067133029 0.6387583389141797 162.1542679765406 0.034146756259120996 0.10618776562308178 1.091178970557086e-06 5.962104012426435 0.24772126721678822 SQGDEAGGHGEDRPEPLS(ph)PK ddPTM_A549_MK2206_60min_R1 5 SQGDEAGGHGEDRPEPLSPK 20 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK 201.66 2.4038999999999998e-55 551929300.0 18098.699999999997 19731.0 18975.6 17624.6 25844.2 19383.600000000002 18472.6 21702.6 30237.399999999998 29088.7 33387.0 True False 21153.318089268367 20735.22362208502 21666.625413958765 21942.62779119837 22042.55241560472 21434.759686207683 21828.832306792578 24779.01001142503 23388.677179205693 22517.54246702047 25096.086465676533 0.8428930988183907 0.8262333511818352 0.863346778932716 0.8743446043353775 0.8783262858833358 0.8541076599940639 0.8698102127057731 0.9873655020002755 0.931965117796114 0.8972531433463663 1.0 14.615174784491828 -8.321088975195106 0.27995055900634347 1.0102689034266994 0.8152326435626696 0.4777280632339682 0.03919192118273793 0.5025785512366416 0.12323458707682669 0.026354214673314138 0.0347845285795734 4.774314508438803e-09 8.321088975195106 -0.19503625986402984 SQGDEAGGHGEDRPEPLS(ph)PK ddPTM_A549_PD325901_60min_R1 5 SQGDEAGGHGEDRPEPLSPK 20 1 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK 200.85 2.721e-55 746767200.0 23116.2 23130.7 23786.0 25790.699999999997 30181.6 28511.600000000002 25509.0 28849.6 28025.9 29597.399999999998 34536.2 True False 25462.939606752996 25080.005266198714 25400.260996837565 27383.732964070514 28061.748536867486 28279.41098259086 26479.758954060406 28274.172095926613 26848.068885692548 27728.61511287612 30288.466343009695 0.8406810473132329 0.8280381377575743 0.8386116586157132 0.9040977068286071 0.9264829793319622 0.9336692938603507 0.8742522204387445 0.9334963274709364 0.8864122924430883 0.9154842902528022 1.0 14.88648090864507 -14.999999999999998 0.0859668648957345 1.3634348393433273 0.7802299799096601 0.4554750115334715 0.03621539118617833 64.19515133596195 0.40491245405870135 4.437061457134544 0.3895732120395917 1.000000000000004e-15 14.999999999999998 -0.5832048594336672 SQGDEAGGHGEDRPEPLS(ph)PKESK ddPTM_A549_PD325901_60min_R1 2 SQGDEAGGHGEDRPEPLSPKESK 23 2 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 SQGDEAGGHGEDRPEPLS(1)PKESK;SQGDEAGGHGEDRPEPLS(1)PKESK 135.32 5.9267e-23 58090000.0 7351.5 8299.0 8898.2 11319.6 10687.0 13564.7 12075.5 16166.3 11810.3 11931.400000000001 11875.8 True False 8097.818868111735 8998.38585534303 9502.08536122341 12018.785983323158 9936.381988148501 13454.233580561944 12535.039760467149 15843.850464282996 11313.954162424563 11178.049367774538 10415.151886898808 0.7775036750350189 0.8639706797422777 0.9123328650805427 1.1539712635820085 0.9540314050193978 1.2917942749818165 1.2035388342473374 1.5212308602251816 1.0862975677441975 1.0732488099223378 1.0 13.346396258282583 -6.0043924814029035 1.7882933705391426 1.1067036901163279 0.7982731462906979 0.4211135941479647 0.15367517667127284 0.35648313477108534 2.1280829890346755 0.024553490397277188 0.11316904269687325 9.899369129275588e-07 6.0043924814029035 -0.30843054382562995 SQGS(ph)GNEAEPLGK ddPTM_A549_MK2206_60min_R1 1 SQGSGNEAEPLGK 13 0 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 S(0.003)QGS(0.997)GNEAEPLGK 116.35 1.6983e-05 7101800.0 3034.8 4244.1 3519.7 3134.9 4292.7 3510.0 3157.4 3562.1 5762.1 5139.0 4921.9 True False 3547.000046263636 4460.106561983227 4018.846385332253 3902.950640731011 3661.2495165053033 3881.4258702505667 3731.058709952413 4067.0385834737335 4456.9935501829195 3978.0963308094956 3699.6563924705224 0.9587376961499532 1.2055461612760472 1.0862755777837478 1.0549494944109483 0.9896187991827068 1.0491314485718128 1.0084879010780028 1.0993017058964991 1.2047047285941788 1.0752610266471365 1.0 11.85317557056631 -8.43555059917959 24.99511219566992 1.0995791509277526 1.05541245276621 0.07237026584680117 0.07444816432871545 202.8190747810889 58046.624317033216 0.01517328570283024 0.01834360717064584 3.668169545056229e-09 8.43555059917959 -0.044166698161542506 SQGS(ph)SQFR ddPTM_A549_PD325901_60min_R1 1 SQGSSQFR 8 0 Q15172 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform 1 S(0.066)QGS(0.574)S(0.36)QFR 78.653 0.0042408 139290000.0 10654.0 10775.0 11005.0 10781.0 13827.0 13075.0 10721.0 11700.0 12217.0 12717.0 14739.0 True False 11735.586236939731 11683.047064865785 11751.865478440986 11446.91788457251 12855.839220560432 12968.521535002428 11128.993521756312 11466.634321527566 11703.561975761915 11914.046449703206 12926.196438219033 0.9078916828341699 0.9038271328077907 0.9091510820378771 0.8855596415607051 0.9945570053809043 1.0032743658960848 0.8609642886790031 0.8870849500340284 0.9054142130439747 0.9216977713936645 1.0 13.65801020094845 -10.716293032075287 0.9705561900581624 1.000061198415857 0.9179645543433714 0.022140413414327043 0.04720707954695007 0.5319276948991305 0.8899351219498305 0.030028775084260377 0.007787289640249055 1.9217945964074986e-11 10.716293032075287 -0.08209664407248551 SQGSS(ph)QFR ddPTM_A549_MK2206_60min_R1 4 SQGSSQFR 8 0 Q15172 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform 1 S(0.177)QGS(0.226)S(0.597)QFR;SQGS(0.15)S(0.85)QFR;S(0.003)QGS(0.101)S(0.896)QFR;SQGS(0.009)S(0.991)QFR 106.35 0.0019126999999999998 283130000.0 14325.9 15540.9 14398.5 12797.2 17533.2 15011.3 14528.3 14567.300000000001 22200.0 22925.300000000003 23431.4 True False 16743.761685372403 16331.86542944915 16440.42380862188 15932.514574488137 14954.0895060896 16599.785802305516 17167.904052638754 16632.25938548522 17171.73544611528 17746.458807687675 17612.73670625852 0.9506621239289101 0.9272758516651063 0.9334394809172346 0.9046018708056124 0.849049739145638 0.9424875917441573 0.9747436948023132 0.9443313474149138 0.9749612301882343 1.007592352265258 1.0 14.104331475305116 -8.365223213963166 0.8518021847750054 0.9916535471810654 0.9161921153840639 0.5585396090636306 0.02835385995941219 0.3083548780723281 0.44437961421452365 0.006453794030370569 0.00820850508217498 4.312973463233707e-09 8.365223213963166 -0.07546143179700149 SQGSS(ph)QFR ddPTM_A549_PD325901_60min_R1 2 SQGSSQFR 8 0 Q15172 Q15172 PPP2R5A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform 1 SQGS(0.139)S(0.861)QFR;SQGS(0.056)S(0.944)QFR 115.7 0.0013002 49048000.0 8576.5 8997.1 9791.0 9144.4 9975.1 8967.5 9746.5 9699.8 10547.400000000001 11352.099999999999 11930.7 True False 9447.179966314403 9755.317192325192 10455.476138065947 9709.228819560794 9274.483388226832 8894.471653165147 10117.408390989445 9506.329879654108 10104.129457571522 10635.326468638497 10463.299534938578 0.9028872713400592 0.9323366075634819 0.9992523011649903 0.9279318428321941 0.8863822886134431 0.8500637512540979 0.9669424407860877 0.908540355545686 0.9656733446110635 1.0164409833748422 1.0 13.353050247583754 -9.120607374957936 1.1653765847225859 0.9907455196993489 0.9219143821454313 0.41125293455617307 0.03860780440620252 0.3321481086469533 0.9324371071160539 0.00912979531233447 0.00825951507204698 7.575174211211828e-10 9.120607374957936 -0.06883113755391757 SQIDVALS(ph)QDS(ph)TYQGER ddPTM_A549_PD325901_60min_R1 2 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 2 SQIDVALS(1)QDS(0.998)T(0.002)YQGER;SQIDVALS(1)QDS(0.994)T(0.006)YQGER 159.26 3.4653e-22 16141700.0 4105.0 4639.200000000001 4718.8 4366.2 4918.799999999999 5080.700000000001 4650.1 4873.7 4302.6 5621.7 5110.4 True False 4521.73657805872 5030.161665273816 5039.046144449555 4635.89025764034 4573.32045693879 5039.324463700717 4827.06210013236 4776.490230156313 4121.776684694544 5266.7449025946735 4481.853197494711 1.0088988592009893 1.122339675937088 1.124321998602343 1.0343690552452127 1.0204083568589903 1.12438409774725 1.0770236969900342 1.065740000771623 0.9196590122582676 1.1751265984210963 1.0 12.129879679000146 -8.705071720894226 8.217178446162636 0.9621085604556058 1.0747737643883502 0.0 0.07674802443448371 0.14305187427340504 18.667631399803305 0.007880696255506007 0.008922167424107893 1.972097030290712e-09 8.705071720894226 0.11266520393274437 SQIDVALS(ph)QDSTYQGER ddPTM_A549_MK2206_60min_R1 2 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 SQIDVALS(0.987)QDS(0.005)T(0.008)YQGER;SQIDVALS(0.998)QDS(0.002)TYQGER 356.83 4.066699999999997e-245 135562000.0 11195.1 10875.300000000001 10271.1 9622.23 13903.6 10372.92 10014.68 11471.2 15417.2 14414.9 15365.5 True False 13084.559186083434 11428.806317837976 11727.696425373211 11979.676781958315 11858.398857987542 11470.575509412967 11834.21772388237 13097.27772907665 11925.228816209388 11158.564078417165 11549.822283773712 1.13287969845786 0.989522265974105 1.015400595544175 1.0372174123223092 1.0267169975980797 0.993138701842012 1.0246233606995152 1.1339808879550424 1.0325032301980164 0.9661243094704388 1.0 13.49558303272404 -10.081884475629034 1.2259798991324953 1.0046768154887544 1.039406497370803 0.16007098458816738 0.047573640293800346 0.758957559360272 2.284744420173945 0.01467093146049377 0.0081664970569252 8.281624295091963e-11 10.081884475629034 0.03472968188204861 SQIDVALS(ph)QDSTYQGER ddPTM_A549_PD325901_60min_R1 2 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 SQIDVALS(0.999)QDS(0.001)TYQGER;SQIDVALS(0.999)QDS(0.001)TYQGER 367.76 4.392399999999998e-246 161701000.0 12612.699999999999 12749.2 11713.0 12239.2 16450.9 14104.8 12487.4 12244.3 13882.3 15327.9 14354.4 True False 13893.132019021008 13823.619827321285 12507.914615990843 12995.187586760037 15295.445536524036 13989.935185231529 12962.614840367467 12000.077831032477 13298.87520799866 14360.093778124221 12588.899800038756 1.103601763434342 1.098080058376406 0.9935669371164855 1.0322734943620753 1.214994620616247 1.1112913286662636 1.0296860763263491 0.9532268920748367 1.0563969385122693 1.140694898380239 1.0 13.619864584577419 -7.8291715525803625 6.7698486738997365 1.020602181853066 1.0908356952438296 0.13098213740471787 0.06718522404991538 0.24139493720774668 19.378835512360688 0.009409654734339868 0.013071494642478391 1.481932584781153e-08 7.8291715525803625 0.07023351339076367 SQIFSTASDNQPTVTIK ddPTM_A549_MK2206_60min_R1 1 SQIFSTASDNQPTVTIK 17 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 164.65 2.8466000000000003e-22 1443300.0 832.7 1284.4 1550.0 1004.1 1524.9 1555.3 1143.9 864.58 1533.7 1639.6 1588.0 False True 973.2394024396102 1349.7704738840398 1769.8133071753248 1250.1045450757615 1300.5892300228152 1719.880813675416 1351.731823118567 987.1368626652031 1186.3193988156306 1269.2132212483446 1193.6557734296084 0.8153434382873226 1.1307870358687104 1.48268315419805 1.0472906619334355 1.0895848359078981 1.4408515854900608 1.1324301806330437 0.8269862087869473 0.9938538607383443 1.063299193536881 1.0 10.221171136703703 -8.019768051983807 24.547407781680946 0.9840415248846185 1.1809687181469148 0.20861097469688838 0.17895928791915255 689.5650225360292 856281.5363331526 0.027353406924254385 0.03557948334156197 9.555027647302215e-09 8.019768051983807 0.19692719326229635 SQIFSTASDNQPTVTIK ddPTM_A549_PD325901_60min_R1 1 SQIFSTASDNQPTVTIK 17 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 189.69 3.9628999999999994e-39 2256300.0 1811.0 1958.8 2105.3 1877.1 2228.4 2162.3 1665.7 2579.5 2530.7 2470.7 2138.9 False True 1994.8513868122639 2123.874950409199 2248.178318197347 1993.0442037965918 2071.884871562658 2144.6909457082793 1729.0891250060142 2528.049848921397 2424.343479746312 2314.699580347701 1875.8288596042248 1.063450632289105 1.1322327938047123 1.198498629918554 1.0624872272287664 1.1045170037525698 1.1433297524598172 0.9217733889491546 1.3476974916863056 1.2924118676038583 1.2339609599758863 1.0 10.873312494891177 -8.25272903405875 24.94538943080959 1.1576626539757686 1.0969205428969178 0.17110676221318566 0.10942350848379356 1833.9788780116894 5252301.4001209065 0.021812355970047263 0.027916171463929107 5.588187453771237e-09 8.25272903405875 -0.06074211107885086 SQKLPDVKPS(ph)PINLR ddPTM_A549_PD325901_60min_R1 2 SQKLPDVKPSPINLR 15 2 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 S(0.002)QKLPDVKPS(0.998)PINLR;SQKLPDVKPS(1)PINLR 59.003 0.0015325 7126500.0 3560.7 3819.1 3834.8999999999996 4026.7 4082.1000000000004 4357.0 3946.1 4023.7 4495.4 4443.200000000001 4172.2 True False 3922.1796427512045 4140.948960132614 4095.1593751270616 4275.420113700779 3795.387378480493 4321.518036558746 4096.270994888778 3943.4441469684143 4306.473971174601 4162.655593718747 3659.0458497548966 1.0719132265079252 1.131701850746144 1.1191877727909254 1.1684521837809634 1.0372614977575998 1.1810505290192592 1.1194915732370965 1.0777247153742466 1.1769390567934732 1.1376341714869698 1.0 11.837251778174448 -10.95758919856277 1.1847328662201637 0.9990613950901128 1.1254712890671599 0.0 0.05880272056517452 0.29470572057122996 0.7263027859974402 0.030705612717885942 0.006915573770892775 1.102581754323794e-11 10.95758919856277 0.12640989397704705 SQLDDHPES(ph)DDEENFIDANDDEDMEK ddPTM_A549_MK2206_60min_R1 4 SQLDDHPESDDEENFIDANDDEDMEK 26 0 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEK;S(0.001)QLDDHPES(0.999)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;S(0.002)QLDDHPES(0.998)DDEENFIDANDDEDMEK 279.72 1.2687999999999996e-153 286526100.0 18098.429999999997 18504.219999999998 18993.72 15999.300000000001 25095.76 23439.399999999998 20410.1 27020.09 29999.2 25822.19 25813.96 True False 21153.002519869235 19446.00576008606 21687.31510242718 19919.12921823586 21404.20694815225 25919.74175018551 24118.35097738635 30850.270503055162 23204.429098878456 19988.939344710187 19403.641302947723 1.0901563366178983 1.002183325102588 1.1176930537843188 1.026566555588194 1.1031025885280927 1.3358184345660877 1.242980665372452 1.58992170703385 1.1958801307749043 1.030164340425812 1.0 14.24403979468123 -7.006854630183146 23.958819762236438 1.1660765613136521 1.059958929127138 0.1533890862038858 0.15667315273433408 431.62048720523694 1508650.2097908733 0.02659350967785442 0.04888750990053316 9.843405353611233e-08 7.006854630183146 -0.10611763218651404 SQLDDHPES(ph)DDEENFIDANDDEDMEK ddPTM_A549_PD325901_60min_R1 5 SQLDDHPESDDEENFIDANDDEDMEK 26 0 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK 280.38 1.1724999999999995e-153 694824600.0 7782.54 8652.09 8768.880000000001 8294.130000000001 10405.220000000001 7918.84 9019.93 8790.67 8355.02 9480.310000000001 10398.72 True False 8572.617731596862 9381.231988812495 9363.988928359067 8806.43957276407 9674.393243260283 7854.3515925230395 9363.18837204509 8615.333190702791 8003.887564764696 8881.72160868017 9119.743362917217 0.9400064662405871 1.02867280530706 1.0267820656483606 0.965645547502235 1.060818584281482 0.8612469978552768 1.0266942828805656 0.9446903106653787 0.877643947450339 0.9739003889950574 1.0 13.154777510997702 -7.2459629558567995 24.99197288495916 0.9430597979011669 1.0048264849539543 0.21438431079714138 0.054008314678715 1040.3542224834853 1680007.4186444231 0.008741421998670455 0.015105505319990494 5.6759301749111054e-08 7.2459629558567995 0.06176668705278743 SQLDDHPES(ph)DDEENFIDANDDEDMEKFTDADK ddPTM_A549_PD325901_60min_R1 1 SQLDDHPESDDEENFIDANDDEDMEKFTDADK 32 1 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEKFTDADK 124.33 4.0807999999999998e-22 9462900.0 1447.7 1532.7 1512.7 1738.1 2199.1 2113.5 1693.1 1756.2 1823.4 2088.4 2235.1 True False 1594.6694382595879 1661.8660080111188 1615.360918604059 1845.4584894884963 2044.6428024831455 2096.2883567286904 1757.531846999869 1721.1712132877517 1746.768839044305 1956.5380675914273 1960.1968694662696 0.8135251428565902 0.8478056637564259 0.824080960318999 0.9414658895925005 1.0430803325585707 1.0694274587324875 0.8966098632115543 0.8780603826575843 0.8911190841356268 0.9981334518323975 1.0 10.93678284121661 -6.287504424681441 5.888625932319646 0.9540161041282968 0.8300614349341843 0.5037791786702299 0.05958442596304297 0.13796476548297182 16.468629180839418 0.009645610029554963 0.02339478553458701 5.15816909796843e-07 6.287504424681441 -0.12395466919411258 SQLDDHPES(ph)DDEENFIDANDDEDMEKFTDADKETEIVK ddPTM_A549_MK2206_60min_R1 3 SQLDDHPESDDEENFIDANDDEDMEKFTDADKETEIVK 38 2 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEKFTDADKETEIVK;SQLDDHPES(1)DDEENFIDANDDEDMEKFTDADKETEIVK;S(0.009)QLDDHPES(0.991)DDEENFIDANDDEDMEKFTDADKETEIVK 174.54 5.796099999999999e-66 109615000.0 4877.7 5495.6 5530.99 4890.29 6487.4 4347.71 4485.530000000001 4764.7 8034.7 8635.7 8557.0 True False 5700.9365116845 5775.302566394526 6315.367550873325 6088.4112695334625 5533.112053806812 4807.781786423675 5300.492739359235 5440.1108162817745 6214.853278779386 6684.889372245872 6432.060738814337 0.8863312619674344 0.8978930394023494 0.9818575736953438 0.9465724153991397 0.8602393973703 0.7474714530307629 0.8240738006986403 0.8457803862848138 0.9662305023451954 1.039307563112058 1.0 12.651065314806493 -8.864428762151295 4.966837416274819 0.9853557566494486 0.874436936788504 0.46580059678410135 0.060580444462768335 0.16666889952046 6.611265210751896 0.011649187539990334 0.012337705750454656 1.3663791861385043e-09 8.864428762151295 -0.11091881986094465 SQLDDHPES(ph)DDEENFIDANDDEDMEKFTDADKETEIVK ddPTM_A549_PD325901_60min_R1 1 SQLDDHPESDDEENFIDANDDEDMEKFTDADKETEIVK 38 2 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEKFTDADKETEIVK 174.65 5.696699999999998e-66 523780000.0 2602.3 2701.1 2608.5 2942.0 2754.2 2685.2 2773.8 2829.4 2520.3 2801.6 3714.2 True False 2866.483580287991 2928.731176511273 2785.5284961847615 3123.7206582332165 2560.7544934741845 2663.3326214752233 2879.3584768815995 2772.9653973786403 2414.380555579336 2624.7064978759536 3257.3769462536893 0.8799975033852729 0.8991072340828126 0.8551446584615879 0.9589681236695093 0.7861400555496991 0.8176310772194552 0.8839500384483138 0.8512878439100605 0.7412039181882576 0.8057730318545508 1.0 11.669494963875213 -11.08494124959521 1.4289621556596468 0.9995013624646943 0.8405836693011899 0.0 0.07940642019773944 0.30401091202683606 1.1144779273842649 0.045526113804882334 0.010130389970559353 8.22353888652876e-12 11.08494124959521 -0.15891769316350446 SQLDDHPES(ph)DDEENFIDANDDEDMEKFTDADKETEIVKK ddPTM_A549_MK2206_60min_R1 1 SQLDDHPESDDEENFIDANDDEDMEKFTDADKETEIVKK 39 3 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 S(0.008)QLDDHPES(0.985)DDEENFIDANDDEDMEKFT(0.007)DADKET(0.001)EIVKK 44.75 0.0046896 3769900.0 624.42 759.15 455.91 619.71 714.89 752.82 387.83 617.05 749.98 747.02 938.71 True False 729.8068303967111 797.7874924081818 520.5648934672921 771.5389778198393 609.7306280090563 832.482912718528 458.29369084716666 704.5187271363714 580.110727471961 578.2676631720778 705.6023999219822 1.0343032144978606 1.1306473624471693 0.7377595279223123 1.0934472131970465 0.8641277695150608 1.1798187092484025 0.649506989910805 0.9984641877837567 0.8221495952056049 0.819537551510619 1.0 9.462711657628285 -7.727083664350458 24.999997693318715 0.9032056914595104 0.9975585743058537 0.16942190874929763 0.14867676414606368 357.7529589475144 260329.29432960865 0.021541648576505895 0.031950567497230804 1.874633335878819e-08 7.727083664350458 0.09435288284634336 SQLDDHPES(ph)DDEENFIDANDDEDMEKFTDADKETEIVKK ddPTM_A549_PD325901_60min_R1 3 SQLDDHPESDDEENFIDANDDEDMEKFTDADKETEIVKK 39 3 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 S(0.002)QLDDHPES(0.998)DDEENFIDANDDEDMEKFTDADKETEIVKK;S(0.001)QLDDHPES(0.999)DDEENFIDANDDEDMEKFTDADKETEIVKK;S(0.001)QLDDHPES(0.999)DDEENFIDANDDEDMEKFTDADKETEIVKK 130.49 5.4062999999999994e-30 32087900.0 3594.04 3575.0 4485.51 4415.5199999999995 5523.45 5044.33 3711.33 5150.05 4899.150000000001 3934.2799999999997 4600.79 True False 3958.9042950075936 3876.2777964635916 4789.923682162817 4688.256642026493 5135.501926868051 5003.250648922282 3852.5666940677 5047.328212613934 4693.255762753051 3685.8688893715725 4034.9219968107564 0.9811600566595221 0.9606822138141559 1.1871167982798234 1.1619200187096899 1.2727636199478463 1.2399869570903483 0.9548057427412 1.2509109758759633 1.163158982122244 0.913491981328244 1.0 11.978325068226592 -5.746240307377656 24.889858634359776 1.1169960217033805 0.9709210194914547 0.20856703553303346 0.11599646422196909 276.523342114315 452823.59566814813 0.015275898410269132 0.05869670621927879 1.7937408248292829e-06 5.746240307377656 -0.14607500221192582 SQLPDLSGPHS(ph)YSPGR ddPTM_A549_PD325901_60min_R1 1 SQLPDLSGPHSYSPGR 16 0 Q86XL3;Q86XL3-3;F5H1D4 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 SQLPDLS(0.001)GPHS(0.611)YS(0.388)PGR 118.37 4.0359e-08 4565500.0 1453.8 1343.4 1439.5 1298.3 1913.3 1831.6 1640.4 1955.3 2208.3 1905.5 2300.2 True False 1601.3887057690054 1456.6130326627094 1537.1931264167022 1378.4930423467663 1778.9164085266711 1816.6840568650443 1702.8263196613227 1916.3000075968228 2115.4928305701105 1785.186404805335 2017.28998216917 0.7938316850446308 0.7220642770933852 0.7620090021781475 0.6833390610825756 0.8818347507054101 0.9005567235859585 0.8441157863830228 0.9499377999866169 1.0486805810116324 0.8849428791024598 1.0 10.97820276859659 -7.6954772546563674 0.7665563277733405 1.0242718557826471 0.7409780428185881 0.6377077265693569 0.06555726945639048 0.17489412920903719 0.2070609363715846 0.010633938387190168 0.020535829532081336 2.016149559880028e-08 7.6954772546563674 -0.283293812964059 SQLPDLSGPHSYS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 SQLPDLSGPHSYSPGR 16 0 Q86XL3;Q86XL3-3;F5H1D4 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 SQLPDLSGPHS(0.408)YS(0.592)PGR 90.01700000000001 3.3554e-06 2477300.0 911.94 971.88 986.0 740.68 1043.0 829.95 740.72 933.28 1346.3 1476.5 1195.0 True False 1065.8531772076108 1021.3445407648873 1125.8296263708842 922.1466332503885 889.5760816537454 917.774758123778 875.2992359650192 1065.5752980501297 1041.365199599324 1142.9576245262153 898.248519677823 1.1865905190580253 1.1370400489290151 1.2533609593642172 1.0266052356881559 0.9903451685874326 1.0217381248264774 0.9744510753872045 1.186281162402942 1.1593286009230863 1.2724291768787581 1.0 9.810970842428857 -6.269647711728513 24.931302777372753 1.0649820110620671 1.1868014643911262 0.21787645395584532 0.09287698981492708 536.6890914963384 1630096.8845268413 0.011671029394015878 0.027550846018787822 5.374675991835395e-07 6.269647711728513 0.12181945332905908 SQLPDLSGPHSYS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 SQLPDLSGPHSYSPGR 16 0 Q86XL3;Q86XL3-3;F5H1D4 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 SQLPDLSGPHS(0.185)YS(0.815)PGR 151.96 1.6322e-15 5264100.0 1498.6 1338.2 1718.9 2082.1 2029.0 1971.1 1466.8 1648.8 2132.5 1900.0 2279.5 True False 1650.7367687889882 1450.9748104133091 1835.55489058539 2210.706588207813 1886.4900396700034 1955.0480151161223 1522.6198766637576 1615.9133905414226 2042.8784409685102 1780.0336757439718 1999.1359509410584 0.8257251179000271 0.7258009690287887 0.9181741190344431 1.10583104023874 0.9436527009491131 0.977946504436488 0.7616389850560242 0.8083059032482306 1.021880698011989 0.8904015131667519 1.0 10.96516087034104 -2.0000000000021965 0.2031333694995184 1.0126586974488503 1.3465115491676994e-13 0.010210028065946508 0.11162125559810836 55.84299720161351 0.6253664634775005 0.08832800223511288 18.320525501681495 0.009999999999949424 2.0000000000021965 -1.0126586974487157 SQLQALHIGLDS(ph)SSIGSGPGDAEADDGFPESR ddPTM_A549_MK2206_60min_R1 1 SQLQALHIGLDSSSIGSGPGDAEADDGFPESR 32 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 S(0.001)QLQALHIGLDS(0.265)S(0.265)S(0.265)IGS(0.202)GPGDAEADDGFPES(0.002)R 41.287 0.018663 3196400.0 558.72 634.27 353.18 485.05 828.17 541.47 506.79 800.07 862.18 640.36 850.2 True False 653.0182766074923 666.5516338137884 403.2662347278586 603.887271774722 706.3472900701654 598.7679960013033 598.8671830039854 913.4823726116147 666.8976066185437 495.702231250665 639.0718756737111 1.0218228989017533 1.0429994796924962 0.6310185913012278 0.9449442148241972 1.105270497665904 0.9369337296686396 0.937088934437395 1.4293890990721807 1.043540847288106 0.7756595934191197 1.0 9.319834388312557 -6.548392492106824 11.03942198445159 1.0438003857252407 0.8922605189949988 0.09786904552852382 0.18011101526573392 0.7406270535810778 316.3206376675702 0.02260030421826778 0.04720338799631955 2.828834291198181e-07 6.548392492106824 -0.1515398667302419 SQLQALHIGLDSS(ph)SIGSGPGDAEADDGFPESR ddPTM_A549_MK2206_60min_R1 1 SQLQALHIGLDSSSIGSGPGDAEADDGFPESR 32 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 SQLQALHIGLDS(0.172)S(0.595)S(0.172)IGS(0.061)GPGDAEADDGFPESR 65.301 0.00028005 3409200.0 446.12 678.37 625.74 473.4 1094.6 798.88 205.97 828.22 1221.1 888.72 1256.2 True False 521.4141494131848 712.8961354474594 714.479341181863 589.3830212517336 933.5857900078522 883.4169513463743 243.3920828811358 945.6227213173731 944.5227996960074 687.9575347571536 944.2508706437501 0.5521987488957323 0.7549859445312845 0.7566626236677562 0.6241805430901189 0.9887052467014122 0.9355744101608274 0.25776209527368654 1.0014528455480138 1.0002879839041843 0.72857495412012 1.0 9.883026398673524 -8.424712484952673 21.92239795940025 1.0003373304129441 0.7117667066890658 0.21649519908132542 0.20085874204961823 12.706049862957293 2833.8635544832123 0.028634873674458855 0.034617855004187605 3.760863015010139e-09 8.424712484952673 -0.2885706237238783 SQLQALHIGLDSS(ph)SIGSGPGDAEADDGFPESR ddPTM_A549_PD325901_60min_R1 1 SQLQALHIGLDSSSIGSGPGDAEADDGFPESR 32 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 1 SQLQALHIGLDS(0.156)S(0.813)S(0.031)IGSGPGDAEADDGFPESR 135.16 1.8357e-30 6663700.0 983.48 1256.2 1159.1 1242.4 1441.4 1116.7 1634.4 1636.9 1230.5 1335.2 1684.6 True False 1083.3221656002897 1362.064382634284 1237.7634962345242 1319.1402263048788 1340.1610365600513 1107.6059654407052 1696.5979863779967 1604.2507453767926 1178.7863641790166 1250.8952441333429 1477.4048795592496 0.7332601784308946 0.9219303398000317 0.8377957277383454 0.8928765868828147 0.9071047856291486 0.7496969725530719 1.148363600155523 1.085857213261259 0.7978763171072515 0.8466841158034616 1.0 10.528849532353743 SQMEEVQDELIHRLT(ph)IGR ddPTM_A549_MK2206_60min_R1 4 SQMEEVQDELIHRLTIGR 18 1 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 SQMEEVQDELIHRLT(1)IGR;SQMEEVQDELIHRLT(1)IGR;SQMEEVQDELIHRLT(1)IGR;SQMEEVQDELIHRLT(1)IGR 53.553000000000004 0.0072749 19079370.0 119.05 0.0 95.551 104.65 406.98 0.0 113.55 107.95 381.79999999999995 344.38 263.58000000000004 True False 139.14272950694792 0.0 109.10156858961902 130.28925469791702 347.113781123146 0.0 134.18056518499276 123.25224308300992 295.32290960931607 266.5843188177026 198.12581156207568 0.7022948116144497 0.0 0.5506681220858289 0.6576086864739252 1.7519866714306946 0.0 0.6772492898682817 0.6220907922660708 1.4905827124740239 1.3455304824539627 1.0 7.630273034599938 -8.7451508236161 24.463365934549305 1.2316640320826286 0.61744010734404 0.29918494405623497 0.44723437205643707 179.9876897807977 270318.5681805139 0.07686426499454332 0.08701842152571039 1.7982463041289944e-09 8.7451508236161 -0.6142239247385887 SQMEEVQDELIHRLT(ph)IGR ddPTM_A549_PD325901_60min_R1 4 SQMEEVQDELIHRLTIGR 18 1 A0A2R8YE63;Q12929;A0A2R8Y4W2;Q12929-2 A0A2R8YE63 EPS8 Epidermal growth factor receptor kinase substrate 8 1 SQMEEVQDELIHRLT(1)IGR;SQMEEVQDELIHRLT(1)IGR;SQMEEVQDELIHRLT(1)IGR;SQMEEVQDELIHRLT(1)IGR 143.95 9.4876e-17 46151300.0 571.69 663.13 664.73 787.2539999999999 577.98 574.1400000000001 811.04 825.79 659.87 665.37 897.77 True False 629.7275479440657 719.0142923549372 709.8425751462132 835.880891596442 537.3846787227542 569.4643941955103 841.9045710181168 809.3189706302769 632.1379586597377 623.3584246472452 787.3499814329261 0.7998063920672256 0.9132079879475931 0.9015591438185412 1.0616382946694083 0.6825232633456709 0.7232671716828162 1.0692888688279447 1.0279024445486982 0.8028678142714722 0.7917170754392768 1.0 9.620861254023328 -7.755993697039046 24.999698392078656 0.9266158390728425 0.8547698257070974 0.114501324185037 0.12354341424334644 320.7777492384128 1472599.5241983403 0.020122845171390815 0.029367366924653346 1.7539059562764834e-08 7.755993697039046 -0.07184601336574514 SQNHS(ph)RSPSEER ddPTM_A549_PD325901_60min_R1 1 SQNHSRSPSEER 12 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 S(0.048)QNHS(0.473)RS(0.473)PS(0.005)EER 46.746 0.010289 15029000.0 131.77 237.63 183.04 281.18 226.52 216.23 226.84 169.97 286.35 124.3 216.81 True False 145.14719339605304 257.6559140625577 195.46219510893573 298.54784999388727 210.61001665157664 214.46909457082805 235.47252033161095 166.57981501111453 274.3157053089487 116.45167678682928 190.14374447182766 0.7633550806482542 1.355058588849516 1.027970684241448 1.5701166021694768 1.1076357901575948 1.127931371955308 1.2383921489802119 0.8760730755241625 1.4426754141764164 0.6124402204779509 1.0 7.5709466663823335 -5.248098693602178 24.080336399802995 1.2004033093653395 0.7633545960547734 0.10053011737180562 0.2620527908548241 1379.984669338203 2490841.7001215126 0.027998519245930432 0.7124462307425011 5.648086072354586e-06 5.248098693602178 -0.43704871331056605 SQNIVTDSSS(ph)LSAEAIR ddPTM_A549_MK2206_60min_R1 2 SQNIVTDSSSLSAEAIR 17 0 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 SQNIVTDS(0.02)S(0.129)S(0.85)LSAEAIR;SQNIVTDSS(0.021)S(0.975)LS(0.004)AEAIR 185.33 1.0414999999999997e-67 4511000.0 1604.6 1556.6 1084.2 1261.8 1647.4 1203.3 1394.1 1408.8 1782.1 2238.0 1669.4 True False 1875.4172512965029 1635.8242912238366 1237.9558629932176 1570.941056644355 1405.0696422975832 1330.6324073141043 1647.3899244773102 1608.5017142690544 1378.4571954289206 1732.434245641495 1254.8419069038969 1.494544644212407 1.3036098668874927 0.9865432897819434 1.2519035649043453 1.1197184558207391 1.0603984454083202 1.3128266719605794 1.2818361463857637 1.098510647313352 1.3805996086917225 1.0 10.293289900238415 -2.0000000000075584 0.0693231057674221 0.7792914189235861 2.1289798701937785 0.0 0.16951924435670337 177.7962967815443 0.8854281695167806 2.9942728900922417 23.423876568500617 0.00999999999982596 2.0000000000075584 1.3496884512701923 SQNRPQGQSTQPSNAAGTNTTSAS(ph)TPR ddPTM_A549_PD325901_60min_R1 1 SQNRPQGQSTQPSNAAGTNTTSASTPR 27 1 Q9UHD9 Q9UHD9 UBQLN2 Ubiquilin-2 1 SQNRPQGQSTQPSNAAGT(0.004)NT(0.013)T(0.013)S(0.07)AS(0.503)T(0.398)PR 101.88 7.7896e-13 7061500.0 325.32 336.56 280.37 302.96 191.29 470.77 281.77 271.8 368.31 266.04 297.74 True False 358.34624691207364 364.92309235742266 299.3975942017717 321.6731511279183 177.85445031467466 466.93620520329574 292.4929115404601 266.3787357770249 352.83121153252614 249.24218899732972 261.1198675293667 1.3723438599392384 1.3975309340120656 1.1465906330091875 1.2318984157409683 0.6811218617620981 1.788206349908561 1.120148054255447 1.0201396710921153 1.3512231561347787 0.9545125438197416 1.0 8.028568420292764 -10.999717701116568 1.223510016346028 0.997433662475837 1.2398169408017814 0.12442792028148275 0.2598023048127588 0.8906556805809306 2.3306842412067637 0.18394396041622763 0.04007195223283389 1.0006502285077222e-11 10.999717701116568 0.24238327832594442 SQNRPQGQSTQPSNAAGTNTTSAST(ph)PR ddPTM_A549_PD325901_60min_R1 1 SQNRPQGQSTQPSNAAGTNTTSASTPR 27 1 Q9UHD9 Q9UHD9 UBQLN2 Ubiquilin-2 1 SQNRPQGQSTQPSNAAGT(0.022)NT(0.058)T(0.045)S(0.157)AS(0.157)T(0.56)PR 87.35700000000001 4.3144e-09 6693200.0 421.3 386.52 376.38 293.83 389.22 555.09 415.91 414.29 272.07 371.32 345.24 True False 464.07006585533213 419.09339689205814 401.9234101568033 311.9792117636527 361.8825299361056 550.569531079503 431.73768264468504 406.0266609457822 260.6358440489108 347.8747918301323 302.77766865667513 1.5327090267728736 1.3841621766606422 1.32745394315243 1.0303904285537364 1.1952087865054886 1.818395436896647 1.4259231354814343 1.3410059689910054 0.8608159419592147 1.1489446806745633 1.0 8.242114993161993 -8.729673158806742 7.734322508375486 0.9342617937566959 1.3791123995978634 0.40765860153425615 0.19862187920529287 0.12141301516228661 23.91047025887587 0.03371621465747437 0.03795335188733198 1.863489033019073e-09 8.729673158806742 0.4448506058411674 SQNSQESTADES(ph)EDDMSSQASK ddPTM_A549_MK2206_60min_R1 1 SQNSQESTADESEDDMSSQASK 22 0 Q9BXW9;Q9BXW9-1 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 SQNSQESTADES(0.997)EDDMS(0.003)SQASK 130.78 2.3129e-22 2442100.0 377.8 617.12 283.93 480.2 677.0 442.82 472.2 450.45 635.85 649.38 696.31 True False 441.5634036768159 648.528772067361 324.19554342341274 597.8490215569968 577.414196816477 489.6789184798735 557.9926277441971 514.3026669452692 491.83099024380164 502.6846069860027 523.3970098216442 0.8436490759228554 1.2390761886246875 0.6194065639272327 1.1422476826161527 1.1032049973178868 0.9355783645893188 1.0660982337945375 0.9826243889328407 0.9396901033336067 0.960426975227276 1.0 9.03176187203647 SQNSQESTADES(ph)EDDMSSQASK ddPTM_A549_PD325901_60min_R1 2 SQNSQESTADESEDDMSSQASK 22 0 Q9BXW9;Q9BXW9-1 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 SQNSQESTADES(0.826)EDDMS(0.144)S(0.03)QASK;SQNSQESTADES(0.813)EDDMS(0.162)S(0.025)QASK 92.95 3.2308999999999996e-07 8783300.0 591.69 915.55 638.84 635.16 766.89 630.22 620.12 775.99 839.35 765.55 802.81 True False 651.7579332208443 992.7066116230046 682.1955240569957 674.3923906469786 713.026292026875 625.0876972687748 643.7190059426841 760.5122706976218 804.0750384182509 717.2130423504193 704.0694594318891 0.9257011854295529 1.4099555069808252 0.9689321343485864 0.9578492315106854 1.0127215184169658 0.8878210649460008 0.914283381162561 1.0801665382720567 1.14203936507494 1.0186680202392755 1.0 9.45957395362985 SQNSQESTADESEDDMS(ph)SQASK ddPTM_A549_MK2206_60min_R1 1 SQNSQESTADESEDDMSSQASK 22 0 Q9BXW9;Q9BXW9-1 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 SQNSQES(0.001)T(0.003)ADES(0.404)EDDMS(0.502)S(0.09)QAS(0.001)K 61.222 0.00034848 2017800.0 200.72 315.07 183.08 123.05 184.66 331.05 238.65 323.05 269.35 376.06 359.96 True False 234.59662886715324 331.10571722722256 209.04349695332806 153.19725552392444 157.49675861762285 366.0814912667951 282.009615864364 368.8433267991325 208.34265506356547 291.10778481498716 270.57199760939665 0.8670395715000109 1.2237249979771139 0.7725984166887351 0.5661977472816059 0.5820881688022588 1.3529910504459444 1.0422719954615516 1.3631984464689595 0.7700081933989831 1.0758976811607697 1.0 8.079868727535247 SQPAPVS(ph)PQQK ddPTM_A549_PD325901_60min_R1 2 SQPAPVSPQQK 11 0 Q13118-2;Q13118 Q13118-2 KLF10 Krueppel-like factor 10 1 SQPAPVS(1)PQQK;SQPAPVS(1)PQQK 149.69 1.1095e-11 29559000.0 11016.599999999999 11854.900000000001 11629.3 11976.2 13410.5 12521.8 15525.199999999999 13859.099999999999 14396.7 14340.900000000001 17182.7 True False 12134.997122007726 12853.954027775168 12418.53423066185 12715.942674076376 12468.592743713441 12419.826612389557 16116.019981715424 13582.669378246379 13791.656764872849 13435.4131265667 15069.336830109649 0.8052774490886092 0.8529873724829096 0.8240929491899538 0.8438289499687194 0.8274148281562246 0.8241787115391718 1.0694578111436481 0.9013448654958194 0.9152132519405963 0.8915729522829268 1.0 13.879328307900973 -7.7250537196059685 24.998756248294455 0.9610816397509103 0.8309846743747402 0.6309786304886482 0.04784484194870837 80.72978328124 55465.217697281165 0.007114352291734706 0.010552100890570832 1.8834161078768228e-08 7.7250537196059685 -0.1300969653761701 SQPDKLQTLS(ph)PALK ddPTM_A549_MK2206_60min_R1 4 SQPDKLQTLSPALK 14 1 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 S(0.003)QPDKLQT(0.134)LS(0.863)PALK;SQPDKLQT(0.045)LS(0.955)PALK;SQPDKLQT(0.012)LS(0.988)PALK;SQPDKLQT(0.046)LS(0.954)PALK 108.56 4.1793e-06 19581000.0 8126.1 9063.0 8752.6 8069.8 11385.2 8141.3 8389.0 8953.5 12772.0 11872.5 12748.9 True False 9497.587015929521 9524.267988797154 9993.850291859839 10046.901362267092 9710.452161883237 9002.806962242432 9913.17271102514 10222.686043943762 9879.162392692988 9190.494004190647 9582.996278259914 0.9910874156839491 0.9938716151235504 1.0428732310511266 1.0484091896247103 1.0133002121593713 0.9394563767770936 1.0344544047788338 1.0667525841719312 1.0309053771736256 0.959041800427315 1.0 13.22626109301737 SQPDKLQTLS(ph)PALK ddPTM_A549_PD325901_60min_R1 2 SQPDKLQTLSPALK 14 1 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 SQPDKLQT(0.112)LS(0.888)PALK;SQPDKLQT(0.014)LS(0.986)PALK 139.67 2.3740999999999996e-10 37872000.0 6208.0 5595.7 6387.7 6418.9 6955.0 6250.6 6681.6 6467.5 6130.2 5884.9 7432.2 True False 6838.231589911942 6067.269277110858 6821.207734360513 6815.3808746203995 6466.504793447445 6199.697185979824 6935.871944311809 6338.500638844404 5872.5690123447375 5513.326409676685 6518.08651659756 1.0491164197497485 0.9308359534138204 1.0465046324547993 1.0456106799542801 0.9920863702838605 0.9511529449928297 1.064096330518229 0.9724480678039696 0.9009651831700781 0.8458504494589987 1.0 12.670232786207402 -8.512558245726996 24.740095071244404 0.9523637198047689 1.0086051793800574 0.3132431090030271 0.055106498860501334 522.6171721833283 1252809.2139239255 0.008397817355351573 0.009820840426655047 3.0721453145862363e-09 8.512558245726996 0.05624145957528859 SQPDKLQTLS(ph)PALKAPEK ddPTM_A549_MK2206_60min_R1 2 SQPDKLQTLSPALKAPEK 18 2 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 SQPDKLQT(0.002)LS(0.998)PALKAPEK;SQPDKLQT(0.006)LS(0.994)PALKAPEK 131.43 3.0404e-13 34285000.0 7133.5 7534.6 8662.5 7163.6 10716.9 8324.4 8444.7 7915.9 11840.7 11208.7 12065.2 True False 8337.460402669572 7918.078957121375 9890.972757036283 8918.682321586224 9140.45820659159 9205.28248271049 9978.992680032663 9038.003066427038 9158.80035571249 8676.646885219763 9069.07785741998 0.9193283522037662 0.873085343582435 1.0906260716401128 0.9834166672512678 1.0078707394835307 1.015018574923698 1.1003315703005268 0.9965735445784581 1.0098932327743888 0.9567286797654798 1.0 13.14674014984137 -5.744618945794908 24.99999821197007 1.0143800157565164 0.896206783430779 0.5573383352260766 0.04171279744289347 117.07167932362633 173999.2815233903 0.004889682399369043 0.018835911460659494 1.8004499546078157e-06 5.744618945794908 -0.1181732323257374 SQPDKLQTLS(ph)PALKAPEK ddPTM_A549_PD325901_60min_R1 2 SQPDKLQTLSPALKAPEK 18 2 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 SQPDKLQT(0.032)LS(0.968)PALKAPEK;SQPDKLQT(0.039)LS(0.961)PALKAPEK 131.43 3.0404e-13 47391000.0 6795.7 6879.3 7079.0 7676.0 9754.400000000001 9084.599999999999 8390.9 9896.3 9283.3 8179.7 8618.4 True False 7485.594461270071 7459.042753905448 7559.423509485115 8150.129086539155 9069.284594853169 9010.618029589528 8710.220291176667 9698.910533002843 8893.155184545354 7663.232346043669 7558.391436538898 0.9903687211915342 0.9868558431423415 1.0001365466389087 1.0782888336716288 1.1998961248567104 1.192134345679724 1.1523907387317331 1.2831977034314752 1.1765936256693348 1.0138707965028044 1.0 12.883863519974726 -6.351660295847337 3.509015529052307 1.1213521702940914 0.9905645372564381 0.3988958961325083 0.07867171748149404 0.26369435628431753 6.123188005583286 0.013874189267559756 0.03501652285626207 4.449791930874255e-07 6.351660295847337 -0.13078763303765328 SQPDPVDT(ph)PTSSKPQSK ddPTM_A549_MK2206_60min_R1 1 SQPDPVDTPTSSKPQSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SQPDPVDT(0.931)PT(0.017)S(0.022)S(0.029)KPQS(0.001)K 92.95 1.766e-06 62467000.0 2848.5 3208.8 3137.0 3059.6 4203.7 3486.9 3578.6 3053.4 4556.3 4471.4 5494.4 True False 3329.2571608613293 3372.1142141070586 3581.8737707154773 3809.2021373506627 3585.3412986077174 3855.881443583105 4228.785297851299 3486.228800645322 3524.305324915992 3461.3076344778306 4129.9888422743325 0.806117713148094 0.8164947516541178 0.8672841277563803 0.9223274645102875 0.8681237251559536 0.9336299905013109 1.0239217245736094 0.8441254767955982 0.8533449991054217 0.8380912798233451 1.0 12.011922168675516 -14.999999999999998 0.2667865062408325 1.828606545307229 0.8700878127605893 0.0 0.0755366080684165 38.621781939191905 0.5044327206605503 17.07100581522777 0.02805717084203982 1.000000000000004e-15 14.999999999999998 -0.9585187325466398 SQPDPVDT(ph)PTSSKPQSK ddPTM_A549_PD325901_60min_R1 1 SQPDPVDTPTSSKPQSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SQPDPVDT(0.975)PT(0.02)S(0.004)S(0.001)KPQSK 144.92 1.0356000000000001e-16 105980000.0 3454.3 3119.9 3781.4 3392.3 4076.2 3508.1 3999.5 3983.6 3793.6 4273.3 3872.2 True False 3804.9779930787445 3382.824922290002 4038.0285434054285 3601.834666527718 3789.9017741265957 3479.5311967068487 4151.7031611103785 3904.1439729262543 3634.168184599361 4003.48310871406 3395.943947898211 1.120447819945229 0.9961368544918628 1.1890739674618633 1.060628420783251 1.1160083417961624 1.0246138481939229 1.2225476111523914 1.149649120487567 1.0701496374369166 1.1789014100753525 1.0 11.729596931198312 -9.68093202051673 1.0976824100967453 1.0131960395115394 1.1062590251989661 0.0 0.08098586373301801 0.4055686434192553 1.0058703298570673 0.017866720019650662 0.012057453587630515 2.0848171909594647e-10 9.68093202051673 0.09306298568742677 SQPDPVDTPT(ph)SSKPQSK ddPTM_A549_PD325901_60min_R1 1 SQPDPVDTPTSSKPQSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SQPDPVDT(0.022)PT(0.392)S(0.392)S(0.193)KPQSK 187.76 8.0134e-40 131880000.0 11455.0 10331.0 12584.0 11553.0 14001.0 12613.0 12880.0 12883.0 15310.0 13166.0 14510.0 True False 12617.903167274693 11201.62962664765 13438.025913739339 12266.602571233294 13017.618060827856 12510.283909826816 13370.155448206438 12626.038458482015 14666.573941959148 12334.696513076382 12725.361986468415 0.9915555392995509 0.880260195235229 1.0560034306315795 0.9639492050817143 1.0229664252121247 0.9830984708434775 1.0506699504834258 0.9921948367290442 1.1525466982829198 0.9693002467193115 1.0 13.63541907543038 -7.839945420373683 1.2165622637591196 1.068952594979791 0.9771930612339697 0.032549895627982495 0.06370516288806215 0.45822436954848617 1.37070647252231 0.011983510423759178 0.01888987890382767 1.4456214366969472e-08 7.839945420373683 -0.09175953374582124 SQPGQKPAAS(ph)PRPR ddPTM_A549_PD325901_60min_R1 2 SQPGQKPAASPRPR 14 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 S(0.001)QPGQKPAAS(0.999)PRPR;SQPGQKPAAS(1)PRPR 49.993 0.0054736 7053800.0 2412.5 1778.49 1472.27 2477.8 2274.8 2823.1000000000004 1726.79 1900.0300000000002 1999.65 1880.3600000000001 2499.0 True False 2657.415224011367 1928.3695939111979 1572.187095678719 2630.8480785079096 2115.0258956339703 2800.1096095958223 1792.503938385744 1862.1324111053 1915.6116644701915 1761.633748695756 2191.6388424662027 1.212524241001787 0.8798756239149541 0.7173568314337647 1.200402195622466 0.9650430785639748 1.277632772033243 0.8178829028092416 0.8496529514917173 0.8740544415222155 0.8037974663350228 1.0 11.09779436256298 SQPLTS(ph)PESR ddPTM_A549_MK2206_60min_R1 2 SQPLTSPESR 10 0 P46939;P46939-2 P46939 UTRN Utrophin 1 SQPLT(0.005)S(0.995)PES(0.001)R;SQPLT(0.021)S(0.979)PESR 140.91 5.2393e-08 42749000.0 6994.6 8318.7 8109.700000000001 6921.2 10264.2 7165.700000000001 7151.5 7498.4 10535.3 10627.7 11028.599999999999 True False 8175.117478448532 8742.086297959488 9259.77740464499 8616.894310704476 8754.349776903524 7923.969617793301 8450.834979484598 8561.321162886901 8149.071371417039 8226.895188741792 8289.894246124546 0.9861546161786477 1.0545473848531104 1.116995842133192 1.0394456255859716 1.056026713609297 0.9558589509748798 1.019414087632697 1.0327419034192438 0.9830127055271736 0.9924004992690701 1.0 13.017137982093024 -7.234409454723808 24.068920799005458 0.9952172816480258 1.0539166470837384 0.38097087836169685 0.03371991674010045 350.39705627266113 312012.44674507884 0.004857278238457687 0.008411137742086197 5.8289528892023846e-08 7.234409454723808 0.058699365435712636 SQPLTS(ph)PESR ddPTM_A549_PD325901_60min_R1 2 SQPLTSPESR 10 0 P46939;P46939-2 P46939 UTRN Utrophin 1 SQPLT(0.192)S(0.808)PESR;SQPLT(0.037)S(0.963)PESR 101.71 0.00041779 54921000.0 11488.5 10494.1 10461.4 11535.6 13254.3 12758.4 10401.599999999999 11980.2 12020.1 12680.3 13347.7 True False 12654.804062613304 11378.474636047147 11171.373513508632 12248.127812751563 12323.363692852698 12654.499820434039 10797.438579973912 11741.245512714913 11514.93699802372 11879.663693966468 11706.017518041659 1.081051180993822 0.9720192728663106 0.9543274214557582 1.0463103949634782 1.0527375064883993 1.081025190755998 0.9223836000016727 1.0030093919318812 0.9836767269719664 1.014833924146891 1.0 13.514962722323256 -7.750597498693132 24.99999241006566 0.988303847608753 1.0267185061885529 0.2166684579175141 0.043294299406006 310.1532553316842 715171.5143097115 0.006534773445315745 0.009640079253502201 1.7758345503870903e-08 7.750597498693132 0.038414658579799865 SQPPGEDS(ph)DT(ph)DVDDDSRPPGRPAEVHLER ddPTM_A549_PD325901_60min_R1 4 SQPPGEDSDTDVDDDSRPPGRPAEVHLER 29 2 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 2 S(0.007)QPPGEDS(0.994)DT(0.999)DVDDDSRPPGRPAEVHLER;S(0.038)QPPGEDS(0.98)DT(0.981)DVDDDS(0.001)RPPGRPAEVHLER;S(0.002)QPPGEDS(0.998)DT(1)DVDDDSRPPGRPAEVHLER;S(0.016)QPPGEDS(0.991)DT(0.991)DVDDDS(0.002)RPPGRPAEVHLER 93.446 9.371900000000002e-10 42668600.0 4579.3099999999995 3872.9900000000002 5012.339999999999 5476.400000000001 7186.6900000000005 6915.1900000000005 4892.05 4758.69 7440.27 5906.570000000001 6688.14 True False 5044.19818009015 4199.380459559587 5352.507534048965 5814.664790193205 6681.92168713456 6858.874985363938 5078.21963978248 4663.774194829915 7127.581326135887 5533.628162178461 5865.541179612609 0.8599714886705979 0.7159408366538713 0.912534303339845 0.9913262241519606 1.1391824697027988 1.1693507513345827 0.8657717138587836 0.7951140486474149 1.2151617570958098 0.9434130615964631 1.0 12.518048508197074 -6.169654673713152 2.247984477548705 1.0687311084031732 0.7900213608679082 0.250559155804399 0.1309214736357325 0.24997378485830804 2.4260496457954535 0.02034787076958612 0.06810869799845175 6.766207719299538e-07 6.169654673713152 -0.278709747535265 SQPPGEDS(ph)DTDVDDDSRPPGRPAEVHLER ddPTM_A549_MK2206_60min_R1 2 SQPPGEDSDTDVDDDSRPPGRPAEVHLER 29 2 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 SQPPGEDS(0.842)DT(0.158)DVDDDSRPPGRPAEVHLER;SQPPGEDS(0.965)DT(0.035)DVDDDSRPPGRPAEVHLER 90.03 7.3038e-10 7077500.0 532.43 592.48 621.45 512.71 670.8199999999999 385.91999999999996 353.72 630.96 712.39 472.95 687.95 True False 622.291167336281 622.6347013133104 709.5809546736161 638.3239730164269 572.1432666298803 426.757798247037 417.98634537415813 720.4005122339594 551.0348024530662 366.11026652195943 517.1130285459067 1.2033948730437705 1.20405920358287 1.372197015938505 1.2343993242857536 1.1064182007533547 0.8252698630453315 0.8083075117049607 1.3931200191565196 1.0655983741166717 0.7079888657059006 1.0 9.01433584342949 -6.839104176707132 3.8460538260048907 1.028608155590985 1.260071427253517 0.33322048183390796 0.1779033850869587 0.20259970092700008 5.852972654387721 0.021895337137953965 0.04360114743542676 1.448424370012716e-07 6.839104176707132 0.231463271662532 SQPPGEDS(ph)DTDVDDDSRPPGRPAEVHLER ddPTM_A549_PD325901_60min_R1 1 SQPPGEDSDTDVDDDSRPPGRPAEVHLER 29 2 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 SQPPGEDS(0.853)DT(0.147)DVDDDSRPPGRPAEVHLER 96.77 2.477e-10 5406000.0 187.18 156.49 0.0 169.94 201.24 284.2 266.43 111.57 234.49 151.95 352.85 True False 206.18237580536686 169.67796150170275 0.0 180.43680783825732 187.10559664031115 281.88556942620977 276.5691394460901 109.34464882502819 224.63520076094068 142.35585106805073 309.45168690043977 0.6662829272981218 0.5483181016114268 0.0 0.5830855525318543 0.604635891678008 0.9109194790620131 0.8937393174885843 0.3533496615263492 0.7259136410305393 0.46002609484514145 1.0 8.273570376242061 -11.695804336421768 0.09066273248446743 1.8319910303021338 0.10523728439847385 0.0 0.2800477257957801 43.919445792120555 0.6604022643204965 11.064702179556349 3.243682185309007 2.014631701556296e-12 11.695804336421768 -1.72675374590366 SQPQEKS(ph)LIGLK ddPTM_A549_PD325901_60min_R1 2 SQPQEKSLIGLK 12 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.003)QPQEKS(0.997)LIGLK;S(0.002)QPQEKS(0.998)LIGLK 64.65 0.001766 10853500.0 3616.4 4424.8 4404.1 4173.4 5558.0 4744.7 4289.2 4962.1 5116.4 4725.4 4863.7 True False 3983.534265747031 4797.69342483695 4702.988710004721 4431.18143952091 5167.625254059085 4706.060736300271 4452.427853140298 4863.127022807856 4901.375500760275 4427.037437558191 4265.495733534559 0.9338971398867434 1.1247680749316775 1.10256556419238 1.0388432473824227 1.2114946484255384 1.1032857680062997 1.043824242546092 1.1401082843841168 1.1490752322705526 1.0378717303017375 1.0 12.058497705162434 -5.252632686845285 24.174558397865553 1.0877835222324854 0.9338970129035099 0.37714932513900556 0.058891571076369685 700.7234622027189 1923432.4870159747 0.009329992951094995 0.1486279346295815 5.58942731759274e-06 5.252632686845285 -0.15388650932897552 SQPS(ph)ETER ddPTM_A549_MK2206_60min_R1 4 SQPSETER 8 0 P26006 P26006 ITGA3 Integrin alpha-3;Integrin alpha-3 heavy chain;Integrin alpha-3 light chain 1 S(0.001)QPS(0.984)ET(0.016)ER;S(0.009)QPS(0.978)ET(0.013)ER;SQPS(1)ETER;SQPS(0.87)ET(0.13)ER 117.02 0.0012725999999999998 47973000.0 3212.4300000000003 3091.64 2918.8 2668.3500000000004 2369.82 2537.15 2023.21 2536.01 3036.25 4520.16 5606.91 True False 3754.609647627088 3248.9912705378792 3332.729729666671 3322.0958697867823 2021.2226172815708 2805.629528976135 2390.8010681455685 2895.4971837048993 2348.544222894934 3499.052716612539 4214.559504156301 0.8908664461670025 0.7708969982115093 0.7907658502341728 0.7882427253691894 0.4795809894932763 0.6656993515477212 0.5672718740328179 0.6870224944859425 0.5572454773930358 0.8302297578576964 1.0 12.041166136617434 -10.91750609102591 1.1628262879798126 1.0006018151256546 0.6758675933893239 0.2993183937104439 0.12431012373456293 0.33347347450985954 0.7985513172148208 0.0869071555303691 0.02041266282495455 1.2091882238319205e-11 10.91750609102591 -0.3247342217363307 SQPS(ph)ETER ddPTM_A549_PD325901_60min_R1 4 SQPSETER 8 0 P26006 P26006 ITGA3 Integrin alpha-3;Integrin alpha-3 heavy chain;Integrin alpha-3 light chain 1 S(0.034)QPS(0.963)ET(0.003)ER;S(0.01)QPS(0.986)ET(0.004)ER;SQPS(0.994)ET(0.006)ER;SQPS(1)ETER 112.13 0.0014627000000000002 93104800.0 3727.24 4016.1500000000005 3832.2999999999997 3785.01 4189.4 3323.48 3788.7700000000004 3822.16 4229.65 4205.3 4358.7 True False 4105.626660950933 4354.605055179651 4092.3829234919917 4018.8014713185985 3895.150996645397 3296.4146807762836 3932.9537156444976 3745.924020373486 4051.892519504086 3939.776640319013 3822.6075320758055 1.0740382386892433 1.1391713689254812 1.0705736566342423 1.051324635761457 1.018977481721802 0.8623471421315959 1.0288667310579933 0.9799394755912393 1.0599813047780426 1.0306516186294388 1.0 11.90034137063285 -6.327633903077797 2.1099533611515646 1.0124549527178985 1.1043911632706505 0.39238116152791613 0.05174680153113206 0.2979622145412354 2.5529198999232894 0.007980273410913001 0.02407798551771996 4.7029038192003355e-07 6.327633903077797 0.09193621055275192 SQPS(ph)ETERLTDDY ddPTM_A549_MK2206_60min_R1 2 SQPSETERLTDDY 13 1 P26006 P26006 ITGA3 Integrin alpha-3;Integrin alpha-3 heavy chain;Integrin alpha-3 light chain 1 S(0.061)QPS(0.911)ET(0.028)ERLTDDY;S(0.008)QPS(0.989)ET(0.003)ERLTDDY 113.43 1.9577e-05 38430000.0 3157.8999999999996 3721.2 3097.8 3380.5 3908.8 2753.1 3086.3 2869.5 5081.799999999999 5889.1 5142.6 True False 3690.8763167575867 3910.5931854697055 3537.1146212694957 4208.722651756413 3333.820697956052 3044.4312146401267 3647.0407602857204 3276.2604124751906 3930.7804139670557 4558.74821984242 3865.550491460393 0.9548126004074481 1.011652336221922 0.9150351622837514 1.088777047681602 0.8624439663434702 0.7875802479791048 0.9434725450728441 0.8475533872117215 1.016874678690853 1.1793270402012366 1.0 11.916458167052067 -8.812021947879428 24.999115934055467 1.0079686664053527 0.928097891664062 0.2553756970617709 0.09242659415196601 131.9159122102978 65195.362981671366 0.013472908611164708 0.014343012246256058 1.541622542218315e-09 8.812021947879428 -0.07987077474129067 SQPS(ph)ETERLTDDY ddPTM_A549_PD325901_60min_R1 2 SQPSETERLTDDY 13 1 P26006 P26006 ITGA3 Integrin alpha-3;Integrin alpha-3 heavy chain;Integrin alpha-3 light chain 1 S(0.004)QPS(0.994)ET(0.003)ERLTDDY;S(0.067)QPS(0.849)ET(0.084)ERLTDDY 108.36 6.1478e-05 61850000.0 3757.2 4985.8 4815.6 4941.8 4827.5 5270.9 5056.6 5131.5 5930.200000000001 5013.200000000001 5374.7 True False 4138.628178095546 5405.970863666625 5142.415574555239 5247.043762357893 4488.433053970891 5227.975537961328 5249.031680077692 5029.148206916126 5680.974316826007 4696.665696441939 4713.645973030452 0.8780099739723938 1.1468767265503967 1.0909634715839989 1.1131603417777498 0.9522210788955858 1.1091150179444231 1.1135820785248822 1.0669337993754404 1.2052187095361448 0.996397634297173 1.0 12.202627691079327 SQPVT(ph)PEKHR ddPTM_A549_MK2206_60min_R1 2 SQPVTPEKHR 10 1 P54274;P54274-2 P54274 TERF1 Telomeric repeat-binding factor 1 1 S(0.002)QPVT(0.998)PEKHR;SQPVT(1)PEKHR 95.417 0.00031368 46231000.0 3036.9 3667.6000000000004 3403.6 2963.6 3890.2 3582.7 3142.0 2926.5 4544.1 4984.9 6257.9 True False 3549.454474923561 3854.2651744138147 3886.2816595496347 3689.6821330410585 3317.95673331678 3961.8189359962157 3712.8607292932384 3341.3403370303718 3514.8686054365985 3858.807627836593 4703.890720746313 0.7545784299938859 0.8193781282831976 0.8261845119848028 0.7843894240076349 0.7053643314210237 0.8422429795239034 0.7893169611525671 0.7103354510965849 0.7472258209431648 0.8203438083324266 1.0 12.19963882900544 -10.709996650633052 0.9040844564859059 1.0039295422583723 0.7761525050496988 0.2516309274150149 0.06673494967025044 0.21967356345806122 0.3106684862258161 0.033428905545316516 0.008146457873471827 1.9498596374122457e-11 10.709996650633052 -0.22777703720867348 SQPVT(ph)PEKHR ddPTM_A549_PD325901_60min_R1 2 SQPVTPEKHR 10 1 P54274;P54274-2 P54274 TERF1 Telomeric repeat-binding factor 1 1 S(0.113)QPVT(0.887)PEKHR;S(0.002)QPVT(0.998)PEKHR 50.145 0.015611000000000002 95072000.0 10379.6 11996.3 11823.8 12377.1 14116.8 13260.7 13244.7 13510.7 13440.7 14242.1 14482.5 True False 11433.329350942335 13007.270302018505 12626.234170285374 13141.60535656641 13125.284668316157 13152.709255771075 13748.734306277944 13241.218489560897 12875.834120293302 13342.85137542801 12701.244312131555 0.9001739569737923 1.0240941739538583 0.9940942682462587 1.0346707010441683 1.0333857333788612 1.0355449381607678 1.0824714467657222 1.042513486408067 1.0137458822042331 1.0505152918508642 1.0 13.632682221035443 -5.259879071144821 24.301914627496018 1.0189129808666402 0.9001738987356784 0.6570978476759539 0.025861467184242502 46.90770262418044 730483.8607388464 0.0037782757290324514 0.03285231422418458 5.496939142589878e-06 5.259879071144821 -0.11873908213096174 SQQPLKPQVHT(ph)PVATVK ddPTM_A549_PD325901_60min_R1 1 SQQPLKPQVHTPVATVK 17 1 A0A0U1RQQ9;Q6P3W7 A0A0U1RQQ9 SCYL2 SCY1-like protein 2 1 SQQPLKPQVHT(0.996)PVAT(0.004)VK 85.805 2.7473000000000003e-05 27572000.0 4099.3 3665.8 5069.3 3773.9 5603.9 5283.7 4334.1 4912.3 5247.8 5337.8 5079.3 True False 4515.457918254839 3974.729831126221 5413.333182177276 4007.0052318512394 5210.301396405485 5240.671299005153 4499.0365472105195 4814.320322875199 5027.253215716081 5000.770397045352 4454.578300335564 1.0136667522298775 0.8922797093558339 1.2152291007589853 0.8995251540531662 1.1696508726792372 1.176468555645407 1.0099803491772963 1.080757817751803 1.1285587269478186 1.1226136482253872 1.0 12.121073147877178 -6.7715652556602315 24.99967381927685 1.074842999232752 1.0121150528239367 0.1494310501665801 0.09658819553520548 410.0111120600322 1012273.7166883143 0.013870141221630562 0.02641905623319258 1.6921339708495844e-07 6.7715652556602315 -0.0627279464088153 SQQPLRMDAAS(ph)R ddPTM_A549_PD325901_60min_R1 1 SQQPLRMDAASR 12 1 F8WBT9 F8WBT9 APOD 1 S(0.002)QQPLRMDAAS(0.998)R 42.843 0.049956 92917000.0 7710.7 7715.6 7635.8 7835.5 8908.7 7830.1 8293.2 8637.0 8329.3 9746.2 9932.3 True False 8493.484587682673 8365.820689900558 8154.011305795517 8319.481039288368 8282.983645346549 7766.334261661382 8608.802264213175 8464.728259404581 7979.248486920991 9130.8232687031 8710.690066037232 0.9750644923986633 0.9604084896234213 0.9360924615591373 0.955088629743104 0.9508986753692109 0.8915865680885754 0.9883031308597104 0.9717632237207416 0.9160294335384387 1.0482319080900326 1.0 13.088571299171019 -11.044650842127751 1.3395174187420067 1.0000482885862518 0.945775862765259 0.4259147371356776 0.030429321525896006 0.3954059661060043 1.262988182972388 0.01933640166415729 0.004303136312845716 9.022962613355376e-12 11.044650842127751 -0.05427242582099279 SQQQPTPVT(ph)PK ddPTM_A549_MK2206_60min_R1 2 SQQQPTPVTPK 11 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 SQQQPT(0.045)PVT(0.955)PK;SQQQPT(0.032)PVT(0.968)PK 179.41 6.8419e-16 307110000.0 19456.9 21517.4 20936.8 18842.1 28104.6 22259.3 20187.9 21143.8 29308.6 28472.9 29223.9 True False 22740.749044466484 22612.543751753685 23905.953064302146 23458.41534585402 23970.450569938486 24614.764351472506 23855.780113589753 24140.9984001718 22670.24889621687 22040.852114712132 21966.79909139139 1.0352327141453395 1.0293963930600776 1.0882765834404475 1.0679032137662325 1.091212719259235 1.120543974070343 1.0859925478600403 1.0989766100984855 1.0320233185499093 1.0033711340014833 1.0 14.42303704123542 -8.984174743274153 2.8856037637748684 1.012561318399889 1.0777777944119338 0.5608583002013523 0.025922010203853683 0.14678832372768508 2.4448514853945134 0.0053232232212790985 0.0054032167885899275 1.0371110385530936e-09 8.984174743274153 0.06521647601204483 SQQQPTPVT(ph)PK ddPTM_A549_PD325901_60min_R1 2 SQQQPTPVTPK 11 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 SQQQPT(0.017)PVT(0.983)PK;SQQQPT(0.009)PVT(0.991)PK 204.94 1.9937000000000003e-24 593060000.0 24977.0 24033.8 26302.9 27594.0 29626.0 28137.0 27179.0 29176.0 29279.0 28254.0 29582.0 True False 27512.64665290444 26059.212672628422 28087.972966186764 29298.418709479065 27545.171964151556 27907.861600792632 28213.311717919474 28594.061791870794 28048.505450465193 26470.037618142196 25943.60153574837 1.060479078627308 1.004456248555959 1.0826551173892958 1.129311929537154 1.061732771612158 1.0757126978818903 1.0874863183141172 1.1021623868401726 1.0811338360950549 1.0202915575028562 1.0 14.66309115046882 -10.610551111526853 0.8844753304565683 0.9998113810658305 1.0762527716014096 0.4181030326468307 0.02965265139272985 0.4298740329149037 0.5982756861663551 0.020973606758759825 0.005672403525882435 2.45159591184256e-11 10.610551111526853 0.07644139053557919 SQQS(ph)VSLSK ddPTM_A549_PD325901_60min_R1 1 SQQSVSLSK 9 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;A0A087WX73;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 SQQS(0.494)VS(0.494)LS(0.012)K 97.779 0.00085321 8956100.0 4103.8 5182.0 3569.9 5403.1 5500.4 5442.3 4815.7 5833.7 5311.9 6082.8 6946.5 True False 4520.414754942111 5618.705326230579 3812.174881552609 5736.83721566958 5114.070879349871 5397.979713188812 4998.964098752155 5717.342277050882 5088.65931562984 5698.730969902859 6092.124537491584 0.7420095776314153 0.9222899649625458 0.6257545882544059 0.9416808833050722 0.8394560629674153 0.8860586614684366 0.8205617051962738 0.9384808603083782 0.8352848475624043 0.9354258821913868 1.0 12.572729718901124 -14.999999999998384 0.15656019954086617 1.5992345168478643 0.7889393543725653 0.2877979450074968 0.08591043043809567 45.590085834287464 0.46367689296737535 8.460710534880743 0.131308149644221 1.0000000000037221e-15 14.999999999998384 -0.810295162475299 SQQSS(ph)GRTSGSDDPGICSNTDSTQAQVLLGK ddPTM_A549_PD325901_60min_R1 1 SQQSSGRTSGSDDPGICSNTDSTQAQVLLGK 31 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.024)QQS(0.102)S(0.31)GRT(0.238)S(0.238)GS(0.085)DDPGICSNT(0.001)DSTQAQVLLGK 94.62899999999999 7.110599999999999e-10 8884600.0 698.91 845.81 717.13 473.02 1043.6 1122.1 764.93 1270.3 1737.7 2961.8 2785.2 True False 769.8628286896516 917.0893770704529 765.7987542530109 502.2373710936358 970.3011362245517 1112.961989631069 794.039829735757 1244.9628699689276 1664.6705120145277 2774.79144253605 2442.638056837481 0.31517679278542154 0.37545037608143295 0.31351298736600447 0.20561268571402255 0.39723492128048415 0.4556393389989334 0.32507469844460374 0.5096796336583731 0.6815051895858041 1.1359814176188725 1.0 11.254224389654551 -9.144978441157368 0.5155470498039383 0.9859805074913065 0.29984381411484756 0.9155950939507336 0.0829884768517096 0.13119396527321486 0.08195969235726265 0.032284483248457764 0.022962014334452628 7.161789612202066e-10 9.144978441157368 -0.686136693376459 down SQQSSGRT(ph)SGSDDPGICSNTDSTQAQVLLGK ddPTM_A549_MK2206_60min_R1 1 SQQSSGRTSGSDDPGICSNTDSTQAQVLLGK 31 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.019)QQS(0.015)S(0.028)GRT(0.396)S(0.396)GS(0.112)DDPGICS(0.012)NT(0.012)DS(0.004)T(0.005)QAQVLLGK 63.727 0.00039279 13666000.0 933.84 1220.1 900.37 985.24 1215.8 1058.8 839.28 580.72 1091.2 1133.2 1310.6 True False 1091.4493618040167 1282.1978785315462 1028.0560047622243 1226.623844229104 1036.957430560521 1170.8415132254418 991.7663121837148 663.0388383804129 844.0449422883328 877.2093329584196 985.1418492801289 1.1079108684719563 1.3015363010600804 1.0435613972885773 1.2451240855572554 1.0525970765715165 1.1885004317713321 1.006724374676019 0.6730389525781635 0.8567750348897475 0.8904396190248353 1.0 9.944187661063523 -7.931229334617311 4.968872899019533 0.9079992999251986 1.1557620294998647 0.626898612469008 0.10581722559308841 0.12369016154892441 5.875058701644938 0.01755167312886569 0.02435455189547585 1.1715765365713144e-08 7.931229334617311 0.24776272957466616 SQQSSGRT(ph)SGSDDPGICSNTDSTQAQVLLGK ddPTM_A549_PD325901_60min_R1 1 SQQSSGRTSGSDDPGICSNTDSTQAQVLLGK 31 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.111)QQS(0.092)S(0.076)GRT(0.321)S(0.321)GS(0.076)DDPGICSNTDSTQAQVLLGK 89.823 1.8765000000000003e-09 8728500.0 649.47 503.42 719.62 839.93 692.64 700.36 791.88 1276.6 1433.9 2790.4 2556.6 True False 715.4037162854562 545.8449701526437 768.4577406265973 891.8105684805662 643.9913558782799 694.6565003636183 822.0154267333633 1251.1372115266743 1373.6381695215703 2614.2136677873555 2242.1544076226846 0.31906978121278706 0.24344664591204185 0.3427318555823187 0.3977471691729459 0.28721989604680803 0.30981653092310885 0.36661856290483186 0.5580067132188421 0.6126420931812693 1.1659382863641217 1.0 11.130669918488287 -9.452159225759281 0.41325690841540935 1.033657807726594 0.27482392820539564 0.929321572520715 0.07777965366337593 0.15158655908635663 0.06086461570613592 0.04495368689242093 0.022754431860901963 3.5305370567698974e-10 9.452159225759281 -0.7588338795211984 down SQQSSGRTS(ph)GSDDPGICSNTDSTQAQVLLGK ddPTM_A549_MK2206_60min_R1 1 SQQSSGRTSGSDDPGICSNTDSTQAQVLLGK 31 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.014)QQS(0.086)S(0.075)GRT(0.103)S(0.495)GS(0.225)DDPGICS(0.001)NT(0.001)DSTQAQVLLGK 82.789 1.5313e-06 14570000.0 1371.8 1423.8 1050.4 955.35 1329.0 928.07 919.56 1027.3 1324.2 1500.6 1169.9 True False 1603.3263027100475 1496.2653384584994 1199.3625147464265 1189.4107928872918 1133.5058605156541 1026.2777513969925 1086.6321490225623 1172.9229209743037 1024.2708143128766 1161.6134177880372 879.381542402582 1.823243069589062 1.701497320913187 1.3638704668165036 1.3525537386623678 1.2889807277723526 1.1670449081670187 1.2356776855399367 1.33380434364102 1.164762693920592 1.3209435970356642 1.0 9.78034544149322 -2.0000000000000004 0.25179979506835576 1.0452759457998357 6.089082977455505 0.7536642383312296 0.11148704176403758 10.376744729040094 0.12625543675078885 0.0406439081681225 22.581197528720494 0.00999999999999999 2.0000000000000004 5.043807031655669 up SQQTSFQSSPCNKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SQQTSFQSSPCNKSPK 16 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 SQQTSFQS(0.085)S(0.066)PCNKS(0.849)PK;SQQTSFQSS(0.002)PCNKS(0.997)PK 108.18 1.8358e-07 27396000.0 3253.6 3739.9 3186.4 3000.3 4377.9 3085.2 3177.1 3162.4 4914.4 4666.6 4363.9 True False 3802.728137117228 3930.2449355955464 3638.279433537712 3735.373634688584 3733.916709369061 3411.673816209988 3754.3379449514796 3610.6798844438213 3801.2962466841846 3612.4118189055416 3280.2231924870707 1.1592894489091132 1.198163876347581 1.1091560604384247 1.1387559368655087 1.1383117825400164 1.040073682798167 1.1445373453703722 1.1007421363014624 1.1588529266516268 1.1012701291727058 1.0 11.67957826649914 -10.850603145032542 0.8484207361229813 0.9905919872165222 1.132594181978429 0.20066485265748502 0.04821646708823085 0.38912494322243757 0.44074119280255186 0.037725878267972766 0.007082598668503637 1.4105771842885677e-11 10.850603145032542 0.1420021947619069 SQQTSFQSSPCNKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SQQTSFQSSPCNKSPK 16 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 SQQTSFQS(0.009)S(0.006)PCNKS(0.985)PK;SQQTSFQSSPCNKS(1)PK 173.09 1.2079999999999999e-28 42946000.0 6203.4 6066.3 6949.7 5995.0 6403.4 7057.900000000001 7159.6 6734.900000000001 5113.7 6220.2 7616.5 True False 6833.164601298287 6577.528390681699 7421.348433941055 6365.297534367151 5953.647274530752 7000.422802439286 7432.062495883452 6600.567136073162 4898.7889723707685 5827.455510454026 6679.718784971515 1.0229718976601239 0.9847013927413037 1.1110270765646766 0.9529289689093244 0.891302084142475 1.048011604648584 1.11263104557704 0.9881504519207556 0.7333825165503071 0.8724103061890915 1.0 12.70557165142324 -8.547491902185905 24.725706030758786 0.8733956474365171 1.0164098354591564 0.382374016633215 0.08288720762851412 200.72690737466706 201643.69927902473 0.018653126837995103 0.02115108122878253 2.8347064886676808e-09 8.547491902185905 0.14301418802263932 SQRPFS(ph)PR ddPTM_A549_MK2206_60min_R1 3 SQRPFSPR 8 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.045)QRPFS(0.955)PR;S(0.003)QRPFS(0.997)PR;SQRPFS(1)PR 61.343999999999994 0.0030329999999999997 75598000.0 3759.7 4311.799999999999 3342.3 2922.2 5154.6 4091.0 3934.8999999999996 4027.4 5866.8 5910.9 6450.9 True False 4394.245444160204 4531.252202813145 3816.2883977884417 3638.139131182544 4396.36516825733 4523.906904613983 4649.820395829401 4598.296283395221 4537.979167354464 4575.623584701662 4848.963494217294 0.9062236598400109 0.9344785144736518 0.7870317857289738 0.750292126455739 0.9066608097793029 0.9329636962639619 0.958930790337897 0.9483049911344948 0.9358658139551475 0.9436292086253881 1.0 12.243460677000181 -7.183094216044389 2.704608006778391 0.9650032903709241 0.8463533604082162 0.48357530823427175 0.051062668528355656 0.18178042402598457 2.6020349602308555 0.008392100977681604 0.015258307892158172 6.56002937286465e-08 7.183094216044389 -0.11864992996270796 SQRPFS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SQRPFSPR 8 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.02)QRPFS(0.98)PR 46.955 0.010753 51644000.0 936.25 726.56 843.45 834.27 1021.1 763.04 843.46 1072.3 1204.0 1109.4 981.17 True False 1031.2974107691784 787.7897610625419 900.6915890768789 885.8009631353589 949.3814586037654 756.8260552251053 875.5583318590215 1050.912135296923 1153.4000670227833 1039.3522946686119 860.4923101490851 1.1984969518094826 0.91551051853799 1.046716604499149 1.0294118293536973 1.1033003402892465 0.8795268084313047 1.0175086070290693 1.2212917220780817 1.340395554287929 1.207857737262682 1.0 9.74901848935066 -8.249006313893322 23.38530108679636 1.1697748772052732 1.0209954096239153 0.3367777352042718 0.10962959195397642 404.2357992402931 760324.802458855 0.022770328436153824 0.02927057250227631 5.636294615653541e-09 8.249006313893322 -0.14877946758135785 SQRYS(ph)GAYGASVSDEELK ddPTM_A549_MK2206_60min_R1 2 SQRYSGAYGASVSDEELK 18 1 C9JRZ6;Q9NX63;F8WAR4;A0A286YEX5 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 S(0.079)QRY(0.03)S(0.888)GAY(0.004)GASVSDEELK;S(0.038)QRYS(0.962)GAYGASVSDEELK 135.27 7.118100000000001e-13 12800500.0 2545.8 2644.3 2818.5 2327.0699999999997 3162.4 2990.3 2542.2 2160.0299999999997 4212.299999999999 3901.2 4386.0 True False 2975.4688011657963 2778.883575281509 3218.2056814668745 2897.2022544661427 2697.215149205948 3306.731561199508 3004.084833230196 2466.220867314441 3258.2207756608736 3019.9162104989286 3296.8351525580997 0.9025227721371064 0.8428943052021577 0.9761500143462695 0.8787828691459227 0.818122540070925 1.0030017905607835 0.9112026213683293 0.7480570769214336 0.9882874407999247 0.9160046137446992 1.0 11.686866036234338 -8.952564967085744 24.999966522728094 0.9948330062708549 0.8877718253796786 0.1909021196102424 0.07042848219733026 90.29634733695467 47589.534248978074 0.010977694526648521 0.011683687196026506 1.1154112819942536e-09 8.952564967085744 -0.10706118089117633 SQRYS(ph)GAYGASVSDEELK ddPTM_A549_PD325901_60min_R1 2 SQRYSGAYGASVSDEELK 18 1 C9JRZ6;Q9NX63;F8WAR4;A0A286YEX5 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 S(0.001)QRYS(0.999)GAYGASVSDEELK;S(0.003)QRYS(0.997)GAYGASVSDEELK 136.49 5.4783e-13 20338000.0 4313.6 4474.2 4055.0 4438.7 4719.8 5590.3 4928.6 5278.3 5091.200000000001 4667.2 5712.0 True False 4751.51349649552 4851.256536206265 4330.196684695881 4712.868417980891 4388.2975304260635 5544.774450258056 5116.160570033406 5173.020165753753 4877.234569124914 4372.512195490665 5009.460211351316 0.9485080819144356 0.9684190175247694 0.8644038483195775 0.9407936622196629 0.876002073134005 1.1068606628901316 1.0212997716680752 1.03265021529302 0.9736048123654557 0.872850968170714 1.0 12.290439440505374 -7.227122598329719 24.99996416784011 1.0012764548327637 0.920444257619094 0.3208828252454119 0.059093632102095145 469.06425690196295 341715.98965204135 0.006704038126309241 0.011611313208426276 5.927579694828027e-08 7.227122598329719 -0.08083219721366974 SQRYS(ph)GAYGASVSDEELKR ddPTM_A549_MK2206_60min_R1 1 SQRYSGAYGASVSDEELKR 19 2 C9JRZ6;Q9NX63;F8WAR4;A0A286YEX5 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 S(0.086)QRYS(0.914)GAYGASVSDEELKR 131.75 4.8255e-17 22136000.0 3851.7 4227.0 3892.0 3563.3 5136.0 3939.1 3300.1 3444.0 6594.9 6058.9 6485.6 True False 4501.772794976155 4442.136245023229 4443.944123565398 4436.308659962617 4380.501203618058 4355.932947437041 3899.685452813692 3932.197546807652 5101.1656798912445 4690.1902819111965 4875.046526546015 0.9234317601817175 0.9111987384806552 0.9115695818218057 0.910003347825637 0.8985557737274881 0.8935161795313638 0.7999278430634036 0.8065969269002291 1.0463829733960377 0.9620811322254621 1.0 12.25120027240575 -8.775077067969514 24.99999216423784 1.0219030821623047 0.8829723947859015 0.5866124171115135 0.04443942098407943 99.02013920002092 181518.62633478825 0.007918966504148169 0.008452387503702002 1.6785061314507753e-09 8.775077067969514 -0.13893068737640324 SQRYS(ph)GAYGASVSDEELKR ddPTM_A549_PD325901_60min_R1 3 SQRYSGAYGASVSDEELKR 19 2 C9JRZ6;Q9NX63;F8WAR4;A0A286YEX5 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 SQRYS(1)GAYGASVSDEELKR;S(0.089)QRY(0.001)S(0.909)GAYGASVSDEELKR;SQRYS(1)GAYGASVSDEELKR 223.68 2.3085999999999997e-75 145878000.0 16768.9 18241.5 18348.100000000002 20117.2 19465.8 21817.9 20053.5 22864.7 21723.1 21720.5 26108.4 True False 18471.266383388276 19778.77522354981 19593.31240208842 21359.793754523886 18098.589361364397 21640.22225610169 20816.64691619625 22408.645621489857 20810.15365111515 20349.063923156278 22897.232314783738 0.8067030167424292 0.8638063741345509 0.8557065820325315 0.9328548298273064 0.7904269438572684 0.9451020961223138 0.909133760360891 0.978661757605594 0.9088501773936646 0.8887128209822015 1.0 14.482885603764794 -2.0000000448159465 0.05484030166470214 1.172616828804266 0.34481294129873835 0.30815681400208417 0.05232796205686006 162.2289584916739 0.6499734798322059 2.11898475305698 10.951209076466906 0.00999999896807475 2.0000000448159465 -0.8278038875055276 SQS(ph)AAVTPSSTTSSTR ddPTM_A549_MK2206_60min_R1 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 S(0.039)QS(0.156)AAVT(0.098)PS(0.132)S(0.132)T(0.132)T(0.132)S(0.132)S(0.023)T(0.023)R 54.281000000000006 0.014249000000000001 1767200.0 309.39 304.95 393.37 401.68 529.09 355.91 340.93 422.52 612.43 682.95 562.45 True False 361.60746814073616 320.47065245323734 449.1557810603598 500.09161803210026 451.26156188128505 393.5721599660625 402.87256793059953 482.4135039132317 473.7155828497466 528.6711206706256 422.7781421697001 0.8553125908661321 0.7580114024073712 1.0623912077272715 1.1828700875254026 1.0673720253497683 0.930918892699248 0.9529172105801282 1.141055924597905 1.1204826730602373 1.2504693784723164 1.0 8.723756980406081 -5.76757832395741 24.989403948324835 1.057606651570948 0.8066619718382068 0.5419269423840498 0.09486083888213889 65.81877790432927 267929.3967205996 0.011326179836418123 0.03654186500393895 1.7077397055680805e-06 5.76757832395741 -0.25094467973274115 SQS(ph)CSDTAQER ddPTM_A549_PD325901_60min_R1 1 SQSCSDTAQER 11 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 S(0.006)QS(0.918)CS(0.07)DT(0.006)AQER 54.776 0.018292 1108300.0 257.99 282.94 372.17 213.36 303.62 290.67 297.22 310.71 219.3 158.67 228.34 True False 284.1809548778001 306.7843467780162 397.4276942400166 226.5387626242827 282.2947786321373 288.30287989133143 308.5308697450245 304.5126453027203 210.08358363629276 148.6515491212084 200.25562756651962 1.4190909805189005 1.5319636731612476 1.9846018764591353 1.131247922353805 1.409672137869716 1.4396742972706964 1.5406851407585973 1.520619664990784 1.0490770531105726 0.7423089724249087 1.0 7.6456989754710385 -8.77472933530841 7.4055477755820425 1.0225214510773528 1.4993388018056708 0.5887200649559742 0.20711254607004317 0.07590459808827531 21.30188348856074 0.032018431185894786 0.034682718055267035 1.6798506227088217e-09 8.77472933530841 0.476817350728318 SQS(ph)DLSSSSSR ddPTM_A549_MK2206_60min_R1 2 SQSDLSSSSSR 11 0 J3KP75 J3KP75 PHACTR2 Phosphatase and actin regulator 1 SQS(0.998)DLS(0.002)SSSSR;S(0.004)QS(0.995)DLSSSSSR 115.12 2.1566e-05 73402000.0 1075.97 1010.51 1135.51 1525.33 2331.9 1932.6599999999999 2232.2 2717.7 3374.4 3312.4 3698.1000000000004 True False 1257.5674310591417 1061.9406427628167 1296.5423925359053 1899.0359184746665 1988.8805990492508 2137.172798404121 2637.7618459351893 3102.9422976071896 2610.103787809522 2564.1265394382904 2779.7597076322645 0.4524014890950084 0.3820260578089152 0.46642247132946263 0.683165495657976 0.715486519783875 0.7688336486553781 0.9489172170863553 1.1162627795084505 0.938967415292435 0.922427407087771 1.0 11.440744461283352 -6.819401574213921 0.7940071000936815 0.9848561144892893 0.38376261556629987 0.9174655302776491 0.06766097183456882 0.13573803240766863 0.15521703698995118 0.011904796979897636 0.04497523300508527 1.5156482618235423e-07 6.819401574213921 -0.6010934989229895 down SQS(ph)DLSSSSSR ddPTM_A549_PD325901_60min_R1 2 SQSDLSSSSSR 11 0 J3KP75 J3KP75 PHACTR2 Phosphatase and actin regulator 1 S(0.033)QS(0.915)DLS(0.05)S(0.003)SSSR;S(0.008)QS(0.747)DLS(0.244)S(0.002)SSSR 182.03 1.5673e-18 124719000.0 2539.3 2838.7 2646.9 2956.1 3408.2 3001.3 3123.2 2823.9 3247.0 3229.1000000000004 3137.0 True False 2797.0878666661424 3077.927211418516 2826.5345511027226 3138.691583209796 3168.8197896517013 2976.858407877842 3242.0550850806153 2767.5750991933055 3110.539881746661 3025.2140749183454 2751.168887081421 1.0166907163716272 1.1187707253711119 1.0273940521700409 1.1408574725993934 1.151808529287835 1.0820340480935884 1.1784282311072336 1.0059633605879024 1.1306248396282494 1.099610456167831 1.0 11.425828990319877 -10.916966484828245 1.0239843473497807 0.9965744656704809 1.0988646271973905 0.0 0.06198421789282987 0.5455901490006725 0.9574689822297059 0.04263610783582716 0.008785841007286665 1.210691560871479e-11 10.916966484828245 0.10229016152690962 SQS(ph)ESSDEVTELDLSHGK ddPTM_A549_MK2206_60min_R1 1 SQSESSDEVTELDLSHGK 18 0 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.161)QS(0.795)ES(0.033)S(0.011)DEVTELDLSHGK 162.11 2.1131e-23 6043800.0 1466.3 1564.5 1004.8 1322.8 1720.4 1264.0 1433.1 1295.0 1657.2 1710.4 1783.8 True False 1713.7755924068683 1644.1263674802094 1147.295749064365 1646.886059382748 1467.3314390000999 1397.7556410247053 1693.4757196531334 1478.5702157711708 1281.8468460046051 1324.0194520756095 1340.833229624519 1.278142243600859 1.2261975099920692 0.8556587976162022 1.2282557017504219 1.094342985078767 1.04245301365042 1.2630024989217838 1.1027249199255176 0.9560076657434631 0.9874602022254342 1.0 10.388914093302184 -8.68084839263096 5.300006363135755 0.9793183795253115 1.134301109248136 0.27038872879134335 0.1142339402333198 0.19439688058723423 9.432923267932239 0.018712363335149144 0.021135627296674054 2.0852186826858764e-09 8.68084839263096 0.15498272972282456 SQS(ph)ESSDEVTELDLSHGK ddPTM_A549_PD325901_60min_R1 1 SQSESSDEVTELDLSHGK 18 0 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.139)QS(0.702)ES(0.139)S(0.02)DEVTELDLSHGK 171.29 8.2065e-31 10832000.0 2158.2 1848.9 1769.7 2184.1 2465.5 1772.9 1913.0 2220.5 2093.5 2436.9 2080.0 True False 2377.298875217133 2004.7132917151132 1889.802484070605 2319.0068965490036 2292.331785513254 1758.4620902031218 1985.800261833766 2176.210385551449 2005.5174753423578 2283.0337181160453 1824.1731862063623 1.3032199427078948 1.0989709238541165 1.0359775586882343 1.2712646551787778 1.256641530994377 0.9639776000984334 1.0886029226005296 1.1929845269117236 1.099411772142714 1.2515443902911167 1.0 10.833026989504729 -14.999999999994582 0.08019017569303283 0.4989331801212444 1.2912361765968146 0.0 0.12131069125311442 154.79250004658576 0.9175724667787043 13.636616909196464 1.3958833937929078 1.0000000000124751e-15 14.999999999994582 0.7923029964755701 SQS(ph)FAGVLGSHER ddPTM_A549_PD325901_60min_R1 1 SQSFAGVLGSHER 13 0 H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4;H3BV02;H3BS40;H3BUP6;H3BQI5;H3BU12 H3BMG9 FAM65A Protein FAM65A 1 S(0.241)QS(0.759)FAGVLGSHER 62.589 0.0021401999999999997 3228300.0 255.37 251.09 275.74 160.17 237.44 398.74 291.31 111.7 197.16 401.54 423.25 True False 281.294974406542 272.2502355004315 294.4533745593199 170.0633371275372 220.76303352353162 395.4927936418256 302.3959614609484 109.47205587304519 188.87405084236875 376.1866958727551 371.1929332028091 0.7578133882544863 0.733446709643262 0.7932623393949126 0.4581534881608845 0.5947393222675202 1.0654642323854255 0.8146598019842365 0.2949195582159233 0.508829867025441 1.0134532805537477 1.0 8.536025434371917 -10.953560669308663 1.265343300421449 0.996791155554578 0.6560884607850559 0.3014091784262992 0.19652491021033136 0.4889858471643402 1.4128989205528446 0.1400826032596852 0.03395376041167413 1.1128569200088016e-11 10.953560669308663 -0.3407026947695221 SQS(ph)FALR ddPTM_A549_MK2206_60min_R1 3 SQSFALR 7 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.077)QS(0.923)FALR;S(0.032)QS(0.968)FALR;S(0.237)QS(0.763)FALR 77.66199999999999 0.017125 81444000.0 5451.1 6993.9 6785.0 5071.0 8401.2 6809.9 5936.4 6843.9 8086.7 8237.2 9510.2 True False 6371.112413400451 7349.8596366378015 7747.215025280371 6313.395227645839 7165.394609002349 7530.519097954231 7014.967037993756 7814.0437835647235 6255.075361806326 6376.410799016142 7148.554871832661 0.8912448078848001 1.0281602041831335 1.0837456191050028 0.8831708423365976 1.0023556841168055 1.0534323696145382 0.9813126098583534 1.093094188079087 0.8750125688274566 0.89198599064281 1.0 12.80343590557935 -8.775962286397545 24.997863453647035 0.9409781708859921 1.002724225742477 0.18806426461672765 0.07094432050473785 365.4177004358403 628980.6985809499 0.012852875158019856 0.013711120643401123 1.6750883323359089e-09 8.775962286397545 0.06174605485648499 SQS(ph)FALR ddPTM_A549_PD325901_60min_R1 2 SQSFALR 7 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.03)QS(0.97)FALR;S(0.201)QS(0.799)FALR 70.028 0.021573 145236000.0 7464.5 7671.799999999999 8497.3 7854.200000000001 9558.2 7683.3 7822.2 8826.400000000001 9049.7 9684.2 9310.1 True False 8222.290544925534 8318.329510184443 9073.977876415862 8339.33609581759 8886.865005999913 7620.729752189995 8119.878101472076 8650.350527823155 8669.372580179479 9072.737959284092 8165.016721586467 1.0070145384010847 1.0187767880735201 1.1113238571118056 1.0213495428331778 1.08840744716481 0.9333391482276455 0.9944717051227765 1.0594406383704733 1.0617703399503897 1.1111719998438967 1.0 12.995240125026543 SQS(ph)FNSIDK ddPTM_A549_MK2206_60min_R1 2 SQSFNSIDK 9 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;F8VZV4;H0YHX7;A0A1B0GTC4 Q8IVL0-3 NAV3 Neuron navigator 3 1 SQS(0.998)FNS(0.002)IDK;S(0.003)QS(0.961)FNS(0.036)IDK 142.1 3.8229e-05 16609300.0 12706.5 14094.7 13464.4 12477.0 17459.199999999997 12532.7 11142.599999999999 12561.900000000001 18507.3 18691.7 19734.8 True False 14851.046555901159 14812.060026668778 15373.854382665437 15533.865560113805 14890.974808062383 13858.90199546704 13167.066187849417 14342.587794205307 14315.426100085102 14469.231988050566 14834.104507228369 1.0011421012076958 0.9985139325027103 1.0363857403845347 1.047172449981356 1.0038337535512374 0.9342594282461654 0.8876212366869441 0.9668657644427707 0.9650347341903568 0.9754031314124821 1.0 13.856630217592782 -7.012112069909668 23.755471099464874 0.970588891454097 1.02097178883697 0.46214670238732214 0.03156234602792638 298.8120089847214 586065.5804688811 0.005438680650518171 0.009765477049790845 9.724962382510756e-08 7.012112069909668 0.05038289738287305 SQS(ph)FSK ddPTM_A549_MK2206_60min_R1 2 SQSFSK 6 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 S(0.063)QS(0.851)FS(0.086)K;S(0.007)QS(0.978)FS(0.015)K 88.921 0.038215 58675000.0 11834.9 14358.0 11430.5 10334.1 17721.9 15309.1 12695.8 15085.599999999999 20235.6 18489.6 19129.8 True False 13832.341784475244 15088.760872023558 13051.516779140353 12865.954963915383 15115.031986058973 16929.09880064188 15002.462522902964 17224.029997712412 15652.268909613074 14312.786518415103 14379.342704378923 0.9619592542476157 1.0493359246127847 0.9076573976615628 0.894752648185882 1.0511629284317712 1.1773207683190194 1.0433343742711052 1.1978315248350817 1.088524644791066 0.995371402759352 1.0 13.811710109651695 -6.881238195266221 7.503533076430527 1.0662877721447208 0.9573868352188009 0.4160436304708831 0.07070035108480294 0.21414605855410143 13.259423462827332 0.010920282726618078 0.020725775708986326 1.314503675359325e-07 6.881238195266221 -0.10890093692591996 SQS(ph)FSKER ddPTM_A549_MK2206_60min_R1 1 SQSFSKER 8 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 S(0.108)QS(0.89)FS(0.002)KER 65.395 0.0025013 16380000.0 3039.6 3802.2 3370.2 2983.6 3903.4 2266.8 2157.7 2024.1 4257.6 5304.5 4748.7 True False 3552.6101689149027 3995.715739490734 3848.145037317597 3714.5821339388954 3329.215030802715 2506.6712714199393 2549.7261602788094 2311.022373546275 3293.2603979901096 4106.209765864753 3569.4667325473442 0.9952775680807615 1.1194153185563374 1.078072811893494 1.0406546445911236 0.9326925505275198 0.7022537144171833 0.7143157091309271 0.64744191407466 0.9226197201843311 1.1503706501655395 1.0 11.801492840772134 -6.770459755036883 3.955151000136925 0.896485588728722 1.0670565785737094 0.28892101736585163 0.1405470745945017 0.2568582695472175 8.901690640805207 0.021231138468391007 0.04352623681199946 1.6964468003790815e-07 6.770459755036883 0.17057098984498742 SQS(ph)FSKER ddPTM_A549_PD325901_60min_R1 2 SQSFSKER 8 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 S(0.01)QS(0.976)FS(0.014)KER;SQS(0.979)FS(0.021)KER 89.40299999999999 0.00074205 59599000.0 11359.8 11906.8 11730.9 12922.3 14651.099999999999 15263.900000000001 14696.7 15619.3 15369.0 14805.2 15937.900000000001 True False 12513.03853335724 12910.227822918236 12527.029417632286 13720.481122327365 13622.05727955109 15139.59585912991 15255.990960842832 15307.760808396188 14723.094377137186 13870.397145328769 13977.639338672307 0.8952183004706011 0.9236343498432646 0.896219248050951 0.9816021711453482 0.9745606500135243 1.0831296682010378 1.0914569042165565 1.095160666082133 1.0533319697556087 0.9923275890338057 1.0 13.770833106359555 -6.647772180177477 1.6598987291435159 1.0398805342282456 0.906222631377166 0.7325661685886257 0.03682715992076636 0.17152012342214176 0.946444215308335 0.006213497212894946 0.016552982153776322 2.25023471209213e-07 6.647772180177477 -0.1336579028510796 SQS(ph)GEDESMNQPGPIK ddPTM_A549_MK2206_60min_R1 2 SQSGEDESMNQPGPIK 16 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 S(0.021)QS(0.979)GEDESMNQPGPIK;S(0.14)QS(0.848)GEDES(0.013)MNQPGPIK 135.09 8.823299999999999e-11 15302500.0 2165.96 2342.9 2193.67 2105.2 3520.4 2424.5 2334.8 2477.8 3452.3 3057.7 2938.7 True False 2531.521095362192 2462.1436026649926 2504.765391968576 2620.9740945060175 3002.5538234456826 2681.058980747151 2759.0029378592803 2829.0357379442526 2670.359562190262 2366.963446335121 2208.93968600604 1.1460345030693926 1.1146269036963918 1.1339220386308577 1.1865304023963517 1.3592737920674365 1.2137311841206242 1.249016872365494 1.2807211332507686 1.2088874943518761 1.0715382865952314 1.0 11.109138311826113 -10.48928162692585 0.849079559138876 1.0020445036269034 1.2111826458241648 0.47514204363830526 0.0693355262789729 0.3673963460410285 0.48327992419857546 0.04625968029278278 0.01386176857090506 3.241293610300771e-11 10.48928162692585 0.20913814219726135 SQS(ph)GEDESMNQPGPIK ddPTM_A549_PD325901_60min_R1 1 SQSGEDESMNQPGPIK 16 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 S(0.013)QS(0.985)GEDES(0.002)MNQPGPIK 161.08 6.511100000000001e-21 9733900.0 2742.5 2344.6 2424.5 2141.9 2752.8 2545.4 2921.4 2900.8 3295.5 3394.6 3304.9 True False 3020.916581078207 2542.1876703744156 2589.041149702877 2274.2002983921575 2559.452824644447 2524.671106324679 3032.5754756514216 2842.9412683664214 3157.001595409952 3180.2643766739375 2898.418251487217 1.0422638553038832 0.8770948323520891 0.8932600215218787 0.7846349633029102 0.8830515828180276 0.8710513415478379 1.0462863577730257 0.9808595660435379 1.0892153310827561 1.0972413574342148 1.0 11.501050080318613 -7.762945409411888 24.999031974728673 1.037913036955019 0.8860050436105045 0.5731156092594996 0.0646469179971275 22.378696218444457 371473.273246551 0.010010057254725495 0.01424016598490631 1.7260548425411346e-08 7.762945409411888 -0.15190799334451444 SQS(ph)GGYSDR ddPTM_A549_MK2206_60min_R1 1 SQSGGYSDR 9 0 F6WMK9;K7EMY9;K7EPM4;K7EQR7;D6W5Y5;Q14011;Q14011-3;Q14011-2 F6WMK9 CIRBP Cold-inducible RNA-binding protein 1 S(0.094)QS(0.904)GGY(0.002)SDR 51.092 0.026768 41285000.0 577.37 558.0 486.73 428.3 704.75 579.42 396.27 484.52 569.87 870.68 852.05 True False 674.81594065877 586.3998165892979 555.7556329041587 533.2335192271178 601.0822085766796 640.7338398121319 468.26712959803695 553.2021937802687 440.7953548953926 673.9927832864776 640.4624696163085 1.0536385388249874 0.9155881014239621 0.8677411390508231 0.8325757472511544 0.9385127733351479 1.0004237097545872 0.7311390624942767 0.8637542713653211 0.6882454098512073 1.0523532841670749 1.0 9.322970222504303 -7.745363777824755 24.971921381969533 0.8417466128507757 0.9263571496459573 0.059478850842890396 0.11275930166014098 468.0668520068461 727095.5199606784 0.019362992459029178 0.02866921715993346 1.7973647588583167e-08 7.745363777824755 0.0846105367951816 SQS(ph)GTLDGESAAWSASGEDSR ddPTM_A549_MK2206_60min_R1 2 SQSGTLDGESAAWSASGEDSR 21 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 S(0.027)QS(0.92)GT(0.052)LDGESAAWSASGEDSR;S(0.013)QS(0.977)GT(0.01)LDGESAAWSASGEDSR 169.39 5.4001e-35 8360000.0 1145.75 1565.78 951.3899999999999 1141.87 2654.7 1921.6 1465.8400000000001 1925.38 3250.2 2832.2 2959.5 True False 1339.1245891019366 1645.4715140128874 1086.311407944214 1421.6282012604916 2264.1971466598247 2124.9424365451537 1732.164153859708 2198.3085112289555 2514.034889502877 2192.404052951672 2224.5744719552436 0.6019688735908854 0.7396792216925129 0.4883232373827535 0.6390562416240356 1.0178113500824972 0.9552129916682356 0.7786496589333143 0.9881928157238979 1.1301194548426234 0.985538618999212 1.0 11.11931368100546 -6.979975828794033 0.7804171152304387 1.0508978788530656 0.5840444761356224 0.6545034543527998 0.11644313902382449 0.29851550995957177 0.33985356134214373 0.021995283325702518 0.07259709077552827 1.0471868289299265e-07 6.979975828794033 -0.46685340271744324 SQS(ph)GTLDGESAAWSASGEDSR ddPTM_A549_PD325901_60min_R1 2 SQSGTLDGESAAWSASGEDSR 21 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4 P49815 TSC2 Tuberin 1 S(0.004)QS(0.914)GT(0.083)LDGESAAWSASGEDSR;S(0.015)QS(0.738)GT(0.247)LDGESAAWSASGEDSR 229.15 6.101199999999999e-76 13383000.0 2886.2 3042.6000000000004 2747.0 3278.7 2933.3999999999996 3375.3999999999996 3208.6 3227.9 3824.8 4303.6 4688.200000000001 True False 3179.20489929186 3299.0105800056294 2933.4279390529196 3481.2178525320387 2727.368103680624 3347.911861510301 3330.705028813292 3163.5170022614384 3664.0569571002843 4031.8699615430305 4111.581120948397 0.7732317095955847 0.8023703006119124 0.7134549587522867 0.8466859220642214 0.6633380257985804 0.8142638471737256 0.8100788798361384 0.7694161708602568 0.8911552148228357 0.9806130155138517 1.0 12.005477578008913 -9.20965564627218 0.6582606842935573 0.986995100123903 0.7632878150272596 0.7356283246036357 0.05020472848199733 0.20241746793977158 0.19421616572509004 0.016657029466415257 0.012317740862232609 6.170840962338577e-10 9.20965564627218 -0.2237072850966434 SQS(ph)IEQESQEK ddPTM_A549_MK2206_60min_R1 4 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(0.001)QS(0.999)IEQESQEK;SQS(1)IEQESQEK;S(0.003)QS(0.987)IEQES(0.01)QEK;SQS(1)IEQESQEK 183.96 1.321e-18 97547000.0 15286.4 15753.7 15613.4 13293.300000000001 19061.0 14598.5 13595.900000000001 14624.2 21109.1 20253.7 22379.4 True False 17866.370603402018 16555.49604050686 17827.614896936262 16550.159096758918 16257.152149954018 16143.303580299984 16066.099041819856 16697.225134734173 16327.92255430595 15678.375103194441 16821.977339981473 1.0620850475727543 0.9841587410273549 1.0597811741527348 0.9838414808361136 0.9664233770732165 0.959655530026874 0.9550660256588808 0.9925839749557387 0.9706303976226811 0.9320173714614995 1.0 14.038059676754788 -6.353082065069489 8.055502246038737 0.9805973122757246 1.0301263838403338 0.5014061777216953 0.027452863890801767 0.1943167562871804 15.365820750973176 0.0032660882838999174 0.0076127133494088076 4.4352482676043984e-07 6.353082065069489 0.049529071564609284 SQS(ph)IEQESQEK ddPTM_A549_PD325901_60min_R1 3 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(0.001)QS(0.994)IEQES(0.005)QEK;SQS(0.927)IEQES(0.073)QEK;SQS(0.976)IEQES(0.024)QEK 225.33 1.4486999999999999e-39 89216000.0 22026.199999999997 20444.9 21614.3 19829.0 23566.6 22797.2 22240.9 20904.6 23608.5 21444.8 24460.3 True False 24262.283609168557 22167.863474382786 23081.17637534456 21053.792295073574 21911.363316356386 22611.54716158757 23087.289620187465 20487.641353658553 22616.316845770267 20090.771668207537 21451.83816661706 1.131011870438453 1.0333782728642802 1.075953314400024 0.9814446730181418 1.0214212482012115 1.0540610546267883 1.0762382897385205 0.9550529513848854 1.054283398471901 0.9365524535548851 1.0 14.388813654325125 SQS(ph)KSPTGTPAR ddPTM_A549_MK2206_60min_R1 2 SQSKSPTGTPAR 12 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 1 S(0.281)QS(0.711)KS(0.008)PTGTPAR;S(0.11)QS(0.887)KS(0.002)PTGTPAR 83.729 0.00015073 24688000.0 4025.0 4180.0 3980.1000000000004 3883.6000000000004 5568.0 4570.5 3547.0 3985.5 6297.0 6594.5 6818.4 True False 4704.321598197944 4392.744145776463 4544.538028315165 4835.08217434143 4748.954575885001 5054.1472763476395 4191.4439868883255 4550.456830081853 4870.739554242699 5104.797869920844 5125.203101733278 0.9178800341799142 0.8570868429176772 0.8867039877460193 0.9433932818596529 0.926588562759389 0.9861359981301797 0.8178103196477877 0.8878588301296677 0.9503505436878155 0.9960186491330396 1.0 12.32339346158408 -9.249412349053486 1.4466284566723828 0.9855771269220223 0.903806605774879 0.40654774393452664 0.04307116647488398 0.26609104273623807 1.1527542957445038 0.009862489274115746 0.008695151143308542 5.631027534431899e-10 9.249412349053486 -0.08177052114714323 SQS(ph)KSPTGTPAR ddPTM_A549_PD325901_60min_R1 2 SQSKSPTGTPAR 12 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 1 S(0.109)QS(0.881)KS(0.01)PTGTPAR;S(0.127)QS(0.833)KS(0.037)PT(0.002)GT(0.001)PAR 102.29 5.9439e-05 34734000.0 5795.0 5948.0 6347.9 5802.1 6369.4 6162.0 6720.2 6808.1 6043.0 6615.200000000001 6954.9 True False 6383.3041339464735 6449.2588345078175 6778.706667023673 6160.4825394748295 5922.0353172371215 6111.818715004587 6975.940888434539 6672.307104648868 5789.033725098572 6197.515143042905 6099.491390743575 1.0465305588648925 1.0573437064433013 1.1113560513112384 1.009999382706534 0.9709064146273317 1.0020210413412043 1.1436922263749796 1.0939120456460654 0.9491010568330099 1.0160708075509524 1.0 12.574473232477946 -8.767616924942862 24.99976929776034 0.9759643863558586 1.0534201042823006 0.2480337392257176 0.04995607611615408 131.4415788735108 531925.8675311402 0.009174832565355177 0.009887794162220303 1.7075879249012911e-09 8.767616924942862 0.07745571792644201 SQS(ph)LNIR ddPTM_A549_MK2206_60min_R1 2 SQSLNIR 7 0 A0A0C4DGF9;O00443-2;O00443 A0A0C4DGF9 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 S(0.002)QS(0.998)LNIR;S(0.002)QS(0.998)LNIR 105.4 0.0098229 243250000.0 9522.099999999999 10385.8 8983.6 9205.3 12842.5 9850.2 8976.3 9410.7 12901.3 13087.3 12717.0 True False 11129.19768700638 10914.39285866152 10257.609565380799 11460.598913241625 10953.385262356876 10892.541625966427 10607.177518890805 10744.695544060043 9979.176149142657 10130.869840475407 9559.017928655127 1.164261618721764 1.141790185992159 1.0730819464865213 1.1989305803984442 1.1458693083440974 1.1395042573687186 1.1096513886738935 1.1240375971940175 1.0439541199340174 1.0598232910627814 1.0 13.222646691336998 -8.824072842209688 0.9581433594341473 1.010943211756776 1.1437728250330708 0.6422580126684291 0.03352214729121537 0.1545017720998545 0.286737707242716 0.006883559662367495 0.006982864896391727 1.4994333213774499e-09 8.824072842209688 0.13282961327629472 SQS(ph)LNIR ddPTM_A549_PD325901_60min_R1 2 SQSLNIR 7 0 A0A0C4DGF9;O00443-2;O00443 A0A0C4DGF9 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 S(0.012)QS(0.988)LNIR;SQS(1)LNIR 103.19 0.010447 268150000.0 9649.5 10153.3 10439.0 10819.4 12350.3 9978.5 10543.2 10810.9 10715.0 11151.8 10281.9 True False 10629.11013641355 11008.954224009454 11147.453314806491 11487.689765359788 11482.857534222007 9897.238404361136 10944.427245460418 10595.268118513022 10264.685812416217 10447.673444821903 9017.291482334223 1.1787475382421695 1.2208715051051746 1.2362307835612798 1.2739623408941945 1.273426455906197 1.0975843936897034 1.2137155893098994 1.1749945246053333 1.1383335930224463 1.1586265637846953 1.0 13.138478441889735 -9.79762666542204 0.3595149759096459 0.968920697713387 1.236678806214863 0.3153922329570047 0.0635652772748526 0.5403369427613152 0.1442583182049852 0.05618001147889114 0.01999011105288081 1.593578033284564e-10 9.79762666542204 0.2677581085014761 SQS(ph)LPNSLDYTQTSDPGR ddPTM_A549_MK2206_60min_R1 2 SQSLPNSLDYTQTSDPGR 18 0 H0YNE5;H0YLG5;Q96TC7 H0YNE5 RMDN3 Regulator of microtubule dynamics protein 3 1 SQS(1)LPNSLDYTQTSDPGR;SQS(1)LPNSLDYTQTSDPGR 384.44 7.472499999999996e-303 54167000.0 9445.9 8607.5 7943.5 8953.400000000001 10901.3 9887.2 8401.8 8425.1 14780.8 14849.900000000001 13411.2 True False 11040.136989917508 9045.584984394953 9070.007745514313 11146.983401933405 9297.733210864788 10933.456941407812 9928.29830533925 9619.383725786638 11432.972400087412 11495.297276296533 10080.828909709799 1.0951616269653885 0.8973056745048312 0.89972836824739 1.1057605978409863 0.9223183226440103 1.0845791590487928 0.9848692398475654 0.9542254721257397 1.134130189341398 1.1403127043674282 1.0 13.299326650804002 -8.743658143225396 24.98511916488317 1.0633392675678583 0.9908802271558446 0.20905503872227182 0.08030908668229393 349.3403818857428 490871.3552639019 0.013661704205054987 0.01547502411422281 1.8044375527831876e-09 8.743658143225396 -0.07245904041201379 SQS(ph)LPNSLDYTQTSDPGR ddPTM_A549_PD325901_60min_R1 1 SQSLPNSLDYTQTSDPGR 18 0 H0YNE5;H0YLG5;Q96TC7 H0YNE5 RMDN3 Regulator of microtubule dynamics protein 3 1 S(0.084)QS(0.855)LPNS(0.047)LDY(0.002)T(0.004)QT(0.005)S(0.005)DPGR 55.336999999999996 0.010256 38649000.0 3175.0 3623.9 3431.5 3235.4 4075.9 3629.8 3278.8 4194.8 4354.7 3904.5 4066.7 True False 3497.3236626885355 3929.298771078155 3664.382225285803 3435.24330987347 3789.6228450916556 3600.2401122563524 3403.5765282282064 4111.131423243062 4171.687102877175 3657.9692036538618 3566.5216809352964 0.9805978977734368 1.1017173376744265 1.0274386511860047 0.9631914838023922 1.062554271112086 1.0094541501040906 0.9543125859634873 1.1527005275809639 1.1696794457122655 1.0256405346439907 1.0 11.800302028413453 -8.260730032122957 24.99967641012055 1.0878082893003758 1.0177751948385156 0.25059466591202584 0.0603716717952627 90.74544259281816 3198202.1864680797 0.012110594144943664 0.015153065512229063 5.486178929995371e-09 8.260730032122957 -0.07003309446186012 SQS(ph)LPTTLLS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 2 S(0.061)QS(0.939)LPTTLLS(1)PVR 94.53200000000001 0.00019842 3466000.0 1139.3 795.08 1107.9 1128.0 1112.9 1152.4 992.78 1156.1 1221.2 1024.9 1379.9 True False 1254.9608972916692 862.0841819335028 1183.088756343914 1197.6739981261287 1034.733743296573 1143.0152364770024 1030.5607861700616 1133.0406785570956 1169.8772108373948 960.1876390894721 1210.1810479068072 1.037002603422286 0.712359678268478 0.9776130260759301 0.9896651415899205 0.8550239198393521 0.9444993692919103 0.8515757108843952 0.9362571662453831 0.9666960268968647 0.7934247861097008 1.0 10.241007181234924 -8.797161477054377 2.0382123594651107 0.986908577461091 0.9065373142592571 0.0 0.10079781939588721 0.3994378932435363 3.2478151439124505 0.014243049368935638 0.015190695774716627 1.5952858862753584e-09 8.797161477054377 -0.08037126320183385 SQS(ph)LPTTLLSPVR ddPTM_A549_PD325901_60min_R1 3 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.004)QS(0.984)LPT(0.011)TLLSPVR;SQS(0.67)LPT(0.325)T(0.005)LLSPVR;SQS(0.566)LPT(0.15)T(0.283)LLSPVR 224.67 4.4489e-46 85023500.0 8582.4 10103.9 9380.5 9621.800000000001 11260.3 11207.6 11014.0 10622.6 10783.0 11150.800000000001 10874.0 True False 9453.678929971044 10955.391112640134 10017.117139528906 10216.11673330672 10469.415373926135 11116.329021467942 11433.143797092063 10410.723909731509 10329.828008892588 10446.736584992565 9536.566935965377 0.9913084020118669 1.148777247221317 1.050390272179732 1.0712572775826223 1.097818055934017 1.1656531219368669 1.1988741728403438 1.0916636961325583 1.08318098937004 1.0954399686112046 1.0 13.219254289274376 -10.060270157877127 0.8360105971914537 1.0066786035571107 1.1038478825745746 0.03203404252415709 0.06001445803305941 0.4894186178812528 0.6856411871355036 0.0244365384091122 0.010935451245140282 8.704219655176409e-11 10.060270157877127 0.09716927901746386 SQS(ph)PAASDCSSSSSSASLPSSGR ddPTM_A549_MK2206_60min_R1 4 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.042)QS(0.958)PAASDCSSSSSSASLPSSGR;S(0.003)QS(0.995)PAAS(0.002)DCSSSSSSASLPSSGR;SQS(1)PAASDCSSSSSSASLPSSGR;S(0.159)QS(0.84)PAASDCSSSSSSASLPSSGR 362.25 2.537499999999999e-268 315702900.0 3690.87 4008.51 3717.27 3699.43 4143.3 3383.34 4130.94 3167.1699999999996 5681.12 6299.780000000001 5211.780000000001 True False 4313.798622892135 4212.526037269474 4244.434782170078 4605.790516073723 3533.826058596321 3741.3627931206715 4881.4783262465335 3616.1260465513355 4394.355390884433 4876.655322612775 3917.551188189528 1.1011467152993937 1.0752957229937987 1.083440797140322 1.1756810044905273 0.9020497471098666 0.9550258856604038 1.2460534889660186 0.9230577656401997 1.1217097568839316 1.2448223618148793 1.0 11.93573641027627 SQS(ph)PAASDCSSSSSSASLPSSGR ddPTM_A549_PD325901_60min_R1 8 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.002)QS(0.998)PAASDCSSSSSSASLPSSGR;S(0.026)QS(0.974)PAASDCSSSSSSASLPSSGR;SQS(0.999)PAAS(0.001)DCSSSSSSASLPSSGR;SQS(1)PAASDCSSSSSSASLPSSGR;S(0.024)QS(0.963)PAAS(0.001)DCS(0.006)S(0.005)S(0.001)SSSASLPSSGR;S(0.102)QS(0.898)PAASDCSSSSSSASLPSSGR;S(0.18)QS(0.81)PAAS(0.007)DCS(0.001)SSSSSASLPSSGR;S(0.017)QS(0.982)PAASDCSSSSSSASLPSSGR 401.95 0.0 573991900.0 9198.68 9373.19 9911.93 8861.26 9872.029999999999 8467.150000000001 9275.37 10913.839999999998 8619.45 9413.22 10064.519999999999 True False 10132.523221889698 10163.10161651317 10584.6131750771 9408.599904818386 9178.652669454641 8398.19633767464 9628.349281027218 10696.15489945815 8257.204491444796 8818.86768272983 8826.647844248871 1.1479469217174771 1.151411248737547 1.1991656812244589 1.0659312652819488 1.03987978578245 0.9514593179500874 1.09082739573673 1.2118026104810993 0.9354858874113683 0.9991185598818116 1.0 13.107649924496336 -6.376558198690546 0.3379608760779009 0.9716225467682139 1.2415873766704677 0.2871287004987354 0.07758147310909964 2.6152650259817936 0.3508845520444552 0.031472862538499236 0.2609537976865742 4.201862158263285e-07 6.376558198690546 0.2699648299022538 SQS(ph)PFRR ddPTM_A549_PD325901_60min_R1 1 SQSPFRR 7 1 Q14137;Q14137-2 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 S(0.014)QS(0.986)PFRR 48.091 0.024213 16725000.0 2081.4 2075.7 2287.2 1879.5 1861.2 1699.8 2220.6 2435.6 1929.6 2410.1 2338.5 True False 2292.7021957543047 2250.6265236697845 2442.423146050906 1995.5924463457961 1730.4757327914288 1685.9573923668938 2305.106148158946 2387.0200473087616 1848.5056223647537 2257.9258746897594 2050.8793249728747 1.1179117990204657 1.097395881008041 1.1909150949596754 0.9730423540995959 0.8437725768259506 0.8220656241630369 1.1239599132384026 1.163900780627516 0.9013234469020757 1.10095501339145 1.0 11.002026889895216 -6.281172697886413 19.14510039902436 0.9635309887018734 1.1316061963456157 0.23302881391562702 0.10841462933899663 33.94386658992407 32932.67948676896 0.015028449114369622 0.035047570215249235 5.233922674375953e-07 6.281172697886413 0.16807520764374229 SQS(ph)PINCIRPSVLGPLK ddPTM_A549_PD325901_60min_R1 1 SQSPINCIRPSVLGPLK 17 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.209)QS(0.655)PINCIRPS(0.136)VLGPLK 40.137 0.029538 4475300.0 3069.9 3188.3 3496.3 2915.7 3557.8 3252.7 2950.2 3808.9 2884.6 3331.4 3572.0 True False 3381.5539880590677 3456.9892303398233 3733.579942959855 3095.7961669648525 3307.9124017436843 3226.2110896292484 3062.4714754113847 3732.9285014757525 2763.370293466713 3121.054835459719 3132.6666447736184 1.0794490354409974 1.1035292363799027 1.1918216543048938 0.988230321962192 1.0559413997216835 1.0298609636654747 0.9775925186679714 1.1916137032018967 0.8821143794782568 0.9962933147281177 1.0 11.613175541597498 -7.6142420980817755 0.5753070421290927 0.9520815215461375 1.1105144636774178 0.14911689570133557 0.08189747645452963 0.7471387310722898 0.495846065181944 0.020859053306263173 0.04784835722250436 2.4308485512968805e-08 7.6142420980817755 0.15843294213128034 SQS(ph)PVHLR ddPTM_A549_MK2206_60min_R1 2 SQSPVHLR 8 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 S(0.001)QS(0.999)PVHLR;SQS(1)PVHLR 141.88 0.00031793 201920000.0 2179.57 2043.19 2306.02 1916.94 2209.8900000000003 1985.31 1651.12 1860.03 3294.3 2735.6 3125.8999999999996 True False 2547.428130629639 2147.1796438299057 2633.048311362867 2386.590386054707 1884.818108423581 2195.3941864578796 1951.1071315565428 2123.694948602974 2548.1463099161083 2117.6260600432865 2349.652759548875 1.084172169814035 0.9138284944887586 1.120611673645089 1.0157204618238669 0.8021687888832814 0.9343483531921489 0.8303810525309911 0.9038335302833069 1.0844778231849643 0.9012506428608894 1.0 11.19823185034937 -8.761184006865028 24.999999986989693 1.0398923055964373 0.947741746352567 0.0 0.10186515695909955 9.423512270921025 922511.9068313503 0.016617661491807018 0.018272806732069234 1.7330695553987752e-09 8.761184006865028 -0.09215055924387028 SQS(ph)PVHLR ddPTM_A549_PD325901_60min_R1 2 SQSPVHLR 8 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 S(0.001)QS(0.999)PVHLR;S(0.006)QS(0.994)PVHLR 109.15 0.00052109 227659000.0 1882.29 1929.3600000000001 1847.08 2139.7 2553.6 2475.56 2034.24 2250.3 2473.0 2599.3 2322.15 True False 2073.3786951313386 2091.9539382895077 1972.4339561943466 2271.8644093887215 2374.243945441754 2455.3998601293006 2111.6541163788397 2205.4160011738018 2369.0684100891553 2435.1797544006877 2036.5402713216838 1.0180887283833318 1.0272097084197904 0.9685219506679663 1.1155509377255357 1.165822242199466 1.2056721365670728 1.0368830639466846 1.082922853149631 1.1632809050967923 1.195743481576376 1.0 10.991904627685782 -6.268190290768917 24.819837047513168 1.0937662556836163 1.0068670866755665 0.33147152486194964 0.06576590208272796 556.6495241488453 2046535.7268170766 0.01057595286365318 0.025104703955281235 5.392742819510211e-07 6.268190290768917 -0.08689916900804984 SQS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 SQSPVR 6 0 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 S(0.005)QS(0.995)PVR 65.156 0.057685 21238000.0 1359.1 1089.1 1062.0 1070.9 1203.8 919.99 788.91 1276.0 1234.8 1440.0 1307.4 True False 1497.074831483461 1180.882279196783 1134.0737063247905 1137.0470608096377 1119.2492408845492 912.4979064617123 818.9324017581162 1250.5491789973646 1182.9056501326684 1349.0781542480618 1146.5980882914407 1.3056666034689364 1.0299007919648895 0.9890769205927136 0.9916701173852164 0.9761478344625147 0.7958306539839397 0.714227949724229 1.0906604430684361 1.0316654651808552 1.176592014258753 1.0 10.163144063425975 -5.22574706934004 2.5798213467421083 0.9801877581903573 1.3918139203631212 0.38419195776577 0.12015917597098019 0.43832781305275625 3.4134173017025775 0.015522265685974696 0.40471666839761955 5.946383718277396e-06 5.22574706934004 0.41162616217276393 SQS(ph)REEQAVLLVR ddPTM_A549_MK2206_60min_R1 1 SQSREEQAVLLVR 13 1 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 S(0.464)QS(0.536)REEQAVLLVR 61.732 0.0020686999999999997 5985800.0 329.26 371.08 224.14 331.82 434.33 297.82 475.49 302.1 419.02 573.29 458.75 True False 384.83103836587713 389.96638698916996 255.92642236792076 413.1159148959659 370.44063235347176 329.3351147230837 561.8803781577473 344.92360014244827 324.1126390374424 443.7833908328029 344.8297141441014 1.1160031243857933 1.1308955434919576 0.7421820448482909 1.1980287601413846 1.0742712044782423 0.9550659389679433 1.6294430413353016 1.000272267715037 0.9399208529401806 1.286963891537925 1.0 8.42974028729132 -8.498560699231613 24.994395140587716 0.9715485679930402 1.116708108112448 0.0 0.22140202366049355 1330.5820283873177 1367591.0528051993 0.03191915717486517 0.03848588349449888 3.172775189458577e-09 8.498560699231613 0.14515954011940768 SQS(ph)S(ph)DTEQQSPTSGGGK ddPTM_A549_PD325901_60min_R1 2 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.191)QS(0.809)S(0.849)DT(0.151)EQQSPTSGGGK;S(0.2)QS(0.856)S(0.682)DT(0.262)EQQSPTSGGGK 112.43 3.790699999999999e-09 10027800.0 1139.3899999999999 1282.97 850.52 1157.58 1323.65 1348.2800000000002 1268.74 1480.16 1796.15 1190.3899999999999 1789.72 True False 1255.0600340254146 1391.0903844836068 908.2414017922422 1229.0810875450738 1230.6813903446027 1337.3000547008087 1317.0225949811675 1450.637047636943 1720.6640617798776 1115.2285722467716 1569.595785969832 0.7996071633499767 0.8862730117640262 0.5786466871985466 0.7830558023482723 0.7840753659925134 0.8520028319740354 0.8390839264182893 0.9242105901428718 1.096246611490934 0.710519601425718 1.0 10.616177358008363 -8.2652950405941 1.519349348104884 1.0454709993051636 0.7733595584488497 0.09019999148297875 0.12657155263648556 0.15538296733412946 0.6981164951457777 0.014358054934079842 0.01859706170438836 5.428813964134705e-09 8.2652950405941 -0.2721114408563139 SQS(ph)S(ph)SQFR ddPTM_A549_MK2206_60min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 2 S(0.011)QS(0.972)S(0.719)S(0.299)QFR 61.78 0.012292 9113200.0 1007.0 1056.0 1068.6 849.9 1270.4 905.45 924.73 1086.9 1004.0 1488.0 1540.3 True False 1176.9569812137463 1109.7458894593174 1220.143548417775 1058.1255381534609 1083.525842888704 1001.2641180109334 1092.7414711009985 1240.971403491648 776.5956030585469 1151.8597665391176 1157.800999882636 1.01654514146477 0.9584944991166963 1.053845650972368 0.9139096772767694 0.9358480801092233 0.864798111344203 0.9438076761133973 1.0718348002959428 0.6707505030115442 0.9948685194224909 1.0 10.177171592260585 -6.966630424112147 0.7231164441674844 0.8618821643709553 1.0094319505008178 0.0 0.1082006245644697 1.1696029875167964 1.1197503058323355 0.024975667751926483 0.08823949196067628 1.0798652750156555e-07 6.966630424112147 0.14754978612986247 SQS(ph)SDLLER ddPTM_A549_MK2206_60min_R1 2 SQSSDLLER 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 SQS(0.775)S(0.225)DLLER;S(0.003)QS(0.978)S(0.02)DLLER 176.87 6.9715e-08 28994000.0 2703.3700000000003 3135.31 2528.9799999999996 2485.73 3898.57 2951.05 3115.21 2989.63 4381.18 3930.5600000000004 3562.27 True False 3159.6327649491636 3294.8838870082277 2887.6273919872588 3094.733961588659 3325.095517404453 3263.328152251551 3681.203333068616 3413.4192078578876 3388.849725306819 3042.643766107523 2677.6600453495557 1.1799977261626908 1.2305086647315964 1.0784144899209163 1.15576059289657 1.2417915123987957 1.2187238473080846 1.3747836807969596 1.2747769134420803 1.2656011845836916 1.1363069674927013 1.0 11.386757092964068 -10.737779726409311 0.9992664936171991 1.0005016322349922 1.2256401616871206 0.31694706254499694 0.08055383411315094 0.3341014531703041 0.5946802234483819 0.052726556389416736 0.013682605291240438 1.8290276613504092e-11 10.737779726409311 0.22513852945212842 SQS(ph)SDLLER ddPTM_A549_PD325901_60min_R1 2 SQSSDLLER 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.001)QS(0.997)S(0.002)DLLER;S(0.002)QS(0.959)S(0.039)DLLER 127.56 5.1905e-05 32944000.0 1533.8 1894.75 1761.76 1715.15 2000.16 1536.03 1999.05 2030.0 1962.9 2059.22 1963.52 True False 1689.510246876118 2054.427232125702 1881.3236279235061 1821.0909201117279 1859.6756617774045 1523.5210809491239 2075.124941672134 1989.5100574958071 1880.4061391686232 1929.200497771316 1722.0194877788053 0.9811214442499601 1.1930336716314762 1.092510068135282 1.057532120301793 1.079938801491822 0.8847292912545838 1.2050531114190766 1.155335390577973 1.0919772700099448 1.120312813799656 1.0 10.749885754204483 -10.603513378964802 1.0191799006176903 1.0026873989765774 1.0843544427705138 0.0 0.09347114838493684 0.8833379486354448 1.7115959644604388 0.04799781065273046 0.014964186637493918 2.491647611864669e-11 10.603513378964802 0.08166704379393641 SQS(ph)SDLLERER ddPTM_A549_MK2206_60min_R1 1 SQSSDLLERER 11 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.403)QS(0.572)S(0.026)DLLERER 77.192 0.00032439999999999997 5663100.0 434.22 645.54 370.4 260.79 600.52 496.25 341.95 215.49 606.3 853.55 568.55 True False 507.5057203402514 678.3952286757262 422.9282896630582 324.68356170730794 512.1843035040339 548.7628456159104 404.07788872750575 246.03636741044753 468.9740180621486 660.7324621837797 427.3633438182645 1.1875274931302187 1.5873968567697574 0.9896222869383662 0.7597365717106964 1.198475046848752 1.2840662484362972 0.9455136819112383 0.575707699243092 1.0973660348875849 1.5460672323472717 1.0 8.739319358980834 -7.777404764819486 24.962642539262145 0.9975445503225989 1.161622938933427 0.046666440266391995 0.2829877751114263 448.11983455684606 700655.2619354391 0.03779278674213248 0.052307287018155776 1.6695338743259986e-08 7.777404764819486 0.16407838861082802 SQS(ph)SDLLERER ddPTM_A549_PD325901_60min_R1 2 SQSSDLLERER 11 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 S(0.165)QS(0.742)S(0.093)DLLERER;S(0.174)QS(0.8)S(0.027)DLLERER 102.5 6.3934e-05 21078400.0 723.3699999999999 793.86 836.63 872.02 1070.77 1492.44 1352.8600000000001 1365.41 1368.29 1655.34 1407.62 True False 796.8059898831515 860.7613682519122 893.4087428648871 925.8826948988892 995.5628091559634 1480.2860634569058 1404.343827613397 1338.1758264065775 1310.7855296566484 1550.8215498979077 1234.4916636383648 0.6454527100934477 0.6972597657849117 0.7237057723271955 0.7500112979054671 0.8064556760325002 1.1991057591220353 1.1375887492625378 1.0839893583911524 1.0618018478905122 1.25624303150597 1.0 10.269701378843715 -7.0755616264542684 4.582531687057891 1.0537825219479837 0.7113497288804703 0.837032195097891 0.0853508178199208 0.06179203657933792 2.408810013479913 0.010346056588910755 0.01847001342131771 8.40307758838296e-08 7.0755616264542684 -0.3424327930675134 SQS(ph)SDTEQQS(ph)PTSGGGK ddPTM_A549_PD325901_60min_R1 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.004)QS(0.732)S(0.264)DTEQQS(0.989)PT(0.01)S(0.001)GGGK 223.65 1.8999e-63 45299000.0 2878.7 2017.1 1947.5 2400.2 2655.6 2577.3 2790.9 3033.7 2458.5 2318.0 2708.7 True False 3170.943504813067 2187.0880960130667 2079.6690612688603 2548.4549027502944 2469.0798173226513 2556.3113233010913 2897.109226739079 2973.190473608388 2355.1777946640473 2171.6410844076454 2375.5470718640254 1.3348266352495033 0.9206671262872176 0.8754484749641278 1.072786531125478 1.0393731391671532 1.0760937358716387 1.219554544320521 1.25158137627448 0.9914254373482084 0.9141646192275278 1.0 11.214044078938507 SQS(ph)SDTEQQSPTSGGGK ddPTM_A549_MK2206_60min_R1 2 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQS(0.5)S(0.5)DTEQQSPTSGGGK;SQS(0.996)S(0.004)DTEQQSPTSGGGK 426.45 0.0 406880000.0 17245.3 17172.6 16603.199999999997 15621.6 21723.1 16223.1 15011.6 16641.9 24108.0 25602.0 22332.6 True False 20155.885032895163 18046.611989894955 18957.78342044732 19448.89270128027 18527.66076641657 17939.81767397778 17739.013406702223 19000.940288681264 18647.57649256518 19818.49041863877 16786.79907159576 1.2006985338259093 1.0750478344874497 1.1293268799842247 1.158582563497107 1.1037042075380796 1.0686860310571653 1.056723996697957 1.1318977613088823 1.1108476614888398 1.1805997280430196 1.0 14.03503954110571 -14.999999999994172 0.18376552874942456 0.5087850181646311 1.1378726803290224 0.0 0.0660155677815122 26.751279134691018 0.30072393230898603 4.723219274861739 0.040166658012812786 1.00000000001342e-15 14.999999999994172 0.6290876621643914 SQS(ph)SDTEQQSPTSGGGK ddPTM_A549_PD325901_60min_R1 2 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.057)QS(0.469)S(0.469)DT(0.004)EQQSPTSGGGK;S(0.045)QS(0.316)S(0.316)DT(0.316)EQQS(0.007)PT(0.001)SGGGK 112.8 2.8441e-09 2386200.0 567.47 592.5600000000001 476.31999999999994 611.88 464.73 574.5699999999999 527.5600000000001 503.84000000000003 808.48 683.21 789.63 True False 625.0791366506652 642.4971107895007 508.645939544844 649.674437919695 432.088968031464 569.8908924180761 547.636584491909 493.7905159451661 774.502397164934 640.0720040026519 692.5105158769858 0.9026276458185961 0.9277795731027292 0.7344956183094228 0.9381437870253223 0.6239457136391243 0.8229346404889955 0.7907989437508969 0.7130440688252027 1.1183980306553394 0.9242776670215231 1.0 9.435692168645415 -8.76579908244867 24.99992511737014 1.0559101903308283 0.8066469374803803 0.43898291284052215 0.10153289309379969 54.651294190708136 313387.11752370634 0.01635923117747895 0.01771096790471004 1.714750418608126e-09 8.76579908244867 -0.24926325285044804 SQS(ph)SLSGKPK ddPTM_A549_PD325901_60min_R1 1 SQSSLSGKPK 10 1 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 UHRF1BP1L UHRF1-binding protein 1-like 1 S(0.067)QS(0.642)S(0.291)LSGKPK 69.71600000000001 0.00096711 10093000.0 4002.3 4361.8 4022.3 3758.6 5206.3 4686.1 3902.7 4126.2 3731.4 4196.8 5145.4 True False 4408.610549662467 4729.384193738431 4295.2774660548075 3990.760185600059 4840.627448759948 4647.937955271502 4051.2193841393855 4043.8997040587183 3574.582234293037 3931.8133317696293 4512.54841937799 0.9769669242175466 1.0480517335679536 0.9518518289155263 0.8843694991643204 1.0727037139309366 1.0300028993178478 0.8977675157439764 0.8961454433803349 0.7921426879195143 0.8713066246304323 1.0 12.139726696777517 -7.775742778053648 24.404254930827666 0.8985557286578295 0.993128021580973 0.37740065320849536 0.06527258088278971 209.8258039050988 358000.95417483605 0.013579954343852752 0.018814053555055707 1.6759351973553303e-08 7.775742778053648 0.09457229292314351 SQS(ph)SS(ph)QFR ddPTM_A549_MK2206_60min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 2 S(0.333)QS(0.637)S(0.414)S(0.615)QFR 58.699 0.016197 12160000.0 2283.5 2359.3 1989.6 2196.6 2848.9 2162.7 1656.5 1985.7 3307.1 3317.6 3417.5 True False 2668.898973785095 2479.3782926149306 2271.755197390985 2734.7670986091225 2429.8305839150084 2391.555478515925 1957.4646079166937 2267.1790559512074 2558.0471303535073 2568.1518558267308 2568.8404317982927 1.0389508592080037 0.9651741158867019 0.884350452161275 1.0645920489092717 0.945886149189122 0.9309863893888259 0.7620031916682303 0.8825690486209335 0.9957983760644761 0.9997319506641835 1.0 11.326901562054168 -8.853377119448423 10.622273921483755 0.998116980888318 0.9325710550329986 0.12306665993094912 0.07622709608749455 0.5920931873268094 64.08555858926522 0.013697242890092512 0.014571910581376298 1.40159610054387e-09 8.853377119448423 -0.06554592585531938 SQS(ph)SS(ph)QFR ddPTM_A549_PD325901_60min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 2 S(0.174)QS(0.649)S(0.224)S(0.953)QFR 57.785 0.018394 20683000.0 1190.1 1320.3 1359.7 1310.2 1603.2 1419.1 1399.9 1310.3 1890.1 1618.0 1688.5 True False 1310.9180758946843 1431.5663145932529 1451.9774185403187 1391.128078319906 1490.5967627397483 1407.543320101105 1453.1739605546738 1284.1650385895355 1810.665669999803 1515.8392038703923 1480.825204283386 0.8852618608210922 0.9667355137205603 0.9805191148424384 0.9394276071854902 1.0065987251082014 0.9505128059879666 0.9813271386462568 0.8671955575006437 1.2227409857438483 1.0236449241178 1.0 10.532185640483751 -8.753880912735147 24.999934925975985 1.1051832452106019 0.9519285336334612 0.4404867072297447 0.0661981048427687 124.13332509565022 410575.91691444756 0.014385969336680363 0.016159577648192407 1.7624592615753487e-09 8.753880912735147 -0.15325471157714066 SQS(ph)SSQFR ddPTM_A549_MK2206_60min_R1 2 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.004)QS(0.514)S(0.441)S(0.041)QFR;S(0.042)QS(0.818)S(0.088)S(0.052)QFR 146.57 0.00081556 193794000.0 12428.8 12741.8 13046.2 10807.099999999999 16836.4 11184.3 10587.3 11046.900000000001 17580.5 15938.5 16328.1 True False 14526.477585014316 13390.303195371893 14896.347334239174 13454.839985149156 14359.787863044226 12367.815202462512 12510.875365769045 12612.831904712384 13598.544820289633 12337.981780230999 12273.382137365243 1.1835757595121006 1.0910035266160483 1.21371168660092 1.0962617992791952 1.1699943587128363 1.0076941354909643 1.0193502675746382 1.0276573941516671 1.1079704573762148 1.005263393752655 1.0 13.58324524227832 -7.256264940247105 24.972114795086817 1.044887109892361 1.14803435823452 0.6431678761634988 0.044607961382023706 281.1034313278573 1356618.9423322645 0.007370482430964871 0.012522089729227274 5.542874681317082e-08 7.256264940247105 0.10314724834215894 SQS(ph)TSEQEK ddPTM_A549_PD325901_60min_R1 1 SQSTSEQEK 9 0 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 S(0.015)QS(0.968)T(0.015)S(0.002)EQEK 58.676 0.010892 1775500.0 784.74 1033.7 1115.6 918.36 1190.8 931.57 880.53 1114.9 1045.3 1432.0 1489.4 True False 864.4062271049447 1120.8135267704652 1191.3113246477753 975.0850114531129 1107.162316036984 923.9836027810493 914.0390509945045 1092.6624448778698 1001.3696761286672 1341.5832756133511 1306.2132420844978 0.6617650160440091 0.8580632094816573 0.9120343342612588 0.74649757025663 0.8476122277478509 0.7073757737339472 0.6997625054970742 0.8365115355392994 0.766620367843346 1.027078299613935 1.0 10.351174723801206 -10.694869551470136 0.7844361519187836 1.0113899773944546 0.784137342324842 0.5903774549037676 0.07386000385124857 0.4472434697658422 0.4499779652770551 0.06356453555193146 0.013718894229965695 2.0189727091045328e-11 10.694869551470136 -0.22725263506961257 SQS(ph)TSEQEKR ddPTM_A549_MK2206_60min_R1 1 SQSTSEQEKR 10 1 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 S(0.112)QS(0.836)T(0.043)S(0.009)EQEKR 54.523999999999994 0.007951100000000001 10829000.0 1489.1 1283.0 967.47 615.6 328.71 230.76 311.78 371.45 403.47 1740.9 1669.5 True False 1740.4236750003886 1348.2992198639229 1104.671793737362 766.4220276353341 280.357194439504 255.17887003390908 368.4263902543115 424.10417501791585 312.0846892091952 1347.62948089244 1254.9170741440385 1.3868834131430616 1.074413001180639 0.8802747340822048 0.6107351979078777 0.22340694872665728 0.2033432131027168 0.2935862439401504 0.33795394433308784 0.24868949163199794 1.073879309365234 1.0 10.293376317623862 -5.825033372922325 1.6014051012419697 0.5273122657887929 1.3555438034819 0.5057558470084194 0.28782319936956746 0.3596670511505545 1.585613908883127 0.04950831258800013 0.33218516687078975 1.49612068378899e-06 5.825033372922325 0.8282315376931072 SQS(ph)TTFNPDDMSEPEFK ddPTM_A549_MK2206_60min_R1 5 SQSTTFNPDDMSEPEFK 17 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.148)QS(0.668)T(0.148)T(0.036)FNPDDMSEPEFK;S(0.068)QS(0.432)T(0.432)T(0.068)FNPDDMSEPEFK;S(0.017)QS(0.801)T(0.152)T(0.029)FNPDDMSEPEFK;S(0.098)QS(0.705)T(0.098)T(0.098)FNPDDMSEPEFK;S(0.014)QS(0.814)T(0.146)T(0.026)FNPDDMSEPEFK 173.58 5.8011e-30 39256600.0 7962.5 7619.85 7452.700000000001 7638.06 10561.6 8202.9 8319.4 8313.45 12260.5 12655.899999999998 11218.1 True False 9306.375335565503 8007.667817989178 8509.604925410027 9509.385042885542 9008.002630866917 9070.925433355664 9830.927291942138 9491.906996372845 9483.51632599533 9796.92340009571 8432.33616619061 1.1036532643088102 0.9496381145353128 1.009163386954285 1.1277284082925148 1.0682689178100415 1.0757310020116932 1.1658604564840727 1.1256556675753249 1.1246606087669297 1.1618278976324974 1.0 13.041716667722211 -6.229501925401615 23.705480860696426 1.078020365988768 1.0137002038942629 0.19005023149569478 0.06034635401758673 518.9229019677454 385167.2859078821 0.009143991246484167 0.02418917192988036 5.895193634839291e-07 6.229501925401615 -0.06432016209450508 SQS(ph)TTFNPDDMSEPEFK ddPTM_A549_PD325901_60min_R1 3 SQSTTFNPDDMSEPEFK 17 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.004)QS(0.332)T(0.332)T(0.332)FNPDDMSEPEFK;S(0.004)QS(0.332)T(0.332)T(0.332)FNPDDMSEPEFK;S(0.094)QS(0.85)T(0.052)T(0.003)FNPDDMSEPEFK 180.08 6.418099999999999e-31 59728000.0 7688.0 7682.700000000001 8845.699999999999 8261.2 8466.5 8164.8 7598.900000000001 9362.5 10140.3 8705.6 9338.2 True False 8468.480100393526 8330.148091437992 9446.02239551526 8771.47556145352 7871.842247839364 8098.30857583081 7888.080297777632 9175.757592760834 9714.138454843134 8155.926930293007 8189.660599727048 1.0340453059404893 1.017154250777575 1.1534082860320347 1.0710426219306162 0.9611927322240587 0.9888454444743067 0.9631754822709665 1.1204075530390907 1.186146646317296 0.9958809441461878 1.0 12.99958794883158 -8.285882023701157 24.802844012019023 1.0927965573778553 1.0291629022989395 0.07974692327745614 0.07099238215747916 1224.2924279865254 1242330.6819176534 0.014028828293132534 0.016964758002952142 5.177474591880735e-09 8.285882023701157 -0.06363365507891583 SQS(ph)TTFNPDDMSEPEFKR ddPTM_A549_MK2206_60min_R1 3 SQSTTFNPDDMSEPEFKR 18 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.001)QS(0.497)T(0.497)T(0.005)FNPDDMSEPEFKR;SQS(0.491)T(0.491)T(0.018)FNPDDMSEPEFKR;S(0.182)QS(0.574)T(0.182)T(0.061)FNPDDMS(0.001)EPEFKR 244.78 3.1598999999999997e-75 58470800.0 10612.699999999999 13813.1 11362.2 10977.800000000001 15977.5 12958.0 12236.5 12089.8 18982.0 21467.600000000002 12318.4 True False 12403.864304396355 14516.127789479622 12973.530812120951 13667.361492812175 13627.230915266273 14329.206959175748 14459.713658178469 13803.56617345969 14682.607308025232 16618.05425010429 9259.40130945548 1.3395967935561692 1.5677177502454829 1.4011198325395715 1.4760523964821994 1.471718360597512 1.5475306102720814 1.561625117534603 1.4907622763216688 1.5856972624171397 1.794722325420147 1.0 13.176703199983205 -10.768850887617043 0.9147142548940135 0.9861751703409442 1.499709673875478 0.0 0.24402399789634188 0.16246920034895412 0.23077109737152088 0.05726872489920178 0.013045446719286079 1.702743034562069e-11 10.768850887617043 0.5135345035345339 SQS(ph)TTFNPDDMSEPEFKR ddPTM_A549_PD325901_60min_R1 4 SQSTTFNPDDMSEPEFKR 18 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 SQS(0.453)T(0.453)T(0.093)FNPDDMSEPEFKR;S(0.004)QS(0.615)T(0.368)T(0.013)FNPDDMSEPEFKR;SQS(0.85)T(0.121)T(0.028)FNPDDMSEPEFKR;S(0.012)QS(0.625)T(0.069)T(0.294)FNPDDMS(0.001)EPEFKR 184.57 4.4058e-40 54896000.0 13401.099999999999 12407.1 12815.4 14282.1 15443.7 16964.699999999997 14047.099999999999 17169.6 15763.3 16114.4 18068.1 True False 14761.569806631589 13452.689859721235 13685.130109260575 15164.272879997505 14358.987789872659 16826.545107828362 14581.670077368066 16827.138858709368 15100.82331935237 15096.93403389929 15845.83824312268 0.9315739300215513 0.8489730649345669 0.8636419165265755 0.956987736927014 0.9061677627628607 1.061890500815337 0.9202208083688295 1.0619279712774163 0.9529835586896984 0.9527381134571139 1.0 13.951816359699315 -6.672829512934374 1.6064760677306569 0.9839126401770505 0.8804677346402924 0.4274445834528521 0.050202302828230745 0.24874895360664695 1.2868758573131878 0.006859554253845207 0.018232532875727923 2.1240781285399771e-07 6.672829512934374 -0.10344490553675811 SQS(ph)VTR ddPTM_A549_MK2206_60min_R1 1 SQSVTR 6 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.046)QS(0.936)VT(0.017)R 68.95 0.05274500000000001 58714000.0 2483.6 2124.5 1379.2 989.69 2086.6 1929.9 1369.1 2114.3 1656.7 2472.3 3065.8 True False 2902.7709618097933 2232.627975526818 1574.7912988749722 1232.164094428873 1779.663904102305 2134.120737036061 1617.8477480825518 2414.0084997721906 1281.4600952062697 1913.8057129130789 2304.477248224492 1.2596223130630875 0.9688218780406571 0.683361617081829 0.5346826901320925 0.7722636035888248 0.926075854591455 0.7020454419018626 1.0475297604400686 0.5560740928093708 0.8304728173765178 1.0 11.17022380888439 -5.41286162729699 3.069087771794398 0.7835769447019458 1.2690752269888173 0.44467131957349926 0.1573905580514786 0.24167147371632894 3.7152069896229896 0.025888599786241116 0.22997361824763707 3.864900989519967e-06 5.41286162729699 0.4854982822868714 SQS(ph)VTRGER ddPTM_A549_PD325901_60min_R1 2 SQSVTRGER 9 1 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 SQS(0.963)VT(0.037)RGER;SQS(0.849)VT(0.151)RGER 78.324 0.00051361 44245000.0 2655.9 3464.7 3127.6000000000004 3224.2 3711.0 6146.5 4508.5 5505.0 4796.6 4169.0 4853.4 True False 2925.5250128297575 3756.6824283657097 3339.8577437866443 3423.351511310517 3450.3521622549943 6096.4449418655795 4680.073434645866 5395.1984564110435 4595.015582625819 3905.7686285140085 4256.462568237483 0.6873136943950995 0.8825832174347719 0.7846557300208125 0.8042714945636322 0.8106149430285527 1.4322797027180243 1.0995218117432646 1.2675310471824703 1.0795385860819455 0.9176090629011007 1.0 12.055439227944644 -7.052939475001978 24.99999311642923 1.0887928498352206 0.7974118315785206 0.5931757766916068 0.13714786655667446 193.55506707460611 91403.59025742093 0.019671562012836527 0.03407232310702985 8.852389716415815e-08 7.052939475001978 -0.29138101825670004 SQS(ph)WDDRGER ddPTM_A549_MK2206_60min_R1 4 SQSWDDRGER 10 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.161)QS(0.839)WDDRGER;S(0.024)QS(0.976)WDDRGER;S(0.105)QS(0.895)WDDRGER;S(0.079)QS(0.921)WDDRGER 88.087 0.00019829 62122200.0 4866.2300000000005 4644.87 3241.0 2941.3999999999996 5764.4 4261.72 3578.5299999999997 3880.15 5775.599999999999 6895.1 6482.8 True False 5687.530656099076 4881.27404315615 3700.622534551761 3662.0431320444645 4916.464396054505 4712.692381699217 4228.702579757399 4430.1731449610115 4467.4358217379895 5337.492121145079 4872.941843822086 1.167165715985247 1.001709890986002 0.7594226759023215 0.7515056098375565 1.0089314737641693 0.9671144316392707 0.8677925399660876 0.9091372905624931 0.9167841449620013 1.0953326126622975 1.0 12.25057728943526 -10.604855956389349 0.8609481971433532 1.0006331933246255 0.9211170377581686 0.1088852091768604 0.11472500036452002 1.5871496251669681 2.0762645389854493 0.07960704284755957 0.021118406699012403 2.4839568292799407e-11 10.604855956389349 -0.07951615556645697 SQS(ph)WDDRGER ddPTM_A549_PD325901_60min_R1 3 SQSWDDRGER 10 1 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.138)QS(0.862)WDDRGER;S(0.156)QS(0.844)WDDRGER;S(0.012)QS(0.988)WDDRGER 87.568 0.00033096 43420500.0 2315.15 2216.66 2230.9300000000003 2453.83 2066.43 2568.0 1709.7099999999998 1890.1599999999999 3269.35 3115.75 3079.1099999999997 True False 2550.182323676648 2403.4657175689463 2382.3343254719075 2605.3975060477287 1921.2910855964924 2547.0870594176854 1774.7739496392094 1852.4592759981642 3131.9505889708767 2919.021013262779 2700.3989900864767 0.9443724179422026 0.8900409629807995 0.8822156778378948 0.9648194639431021 0.7114841520270919 0.9432261931545598 0.6572265639835595 0.6859946559004014 1.1598103096870807 1.0809591560280138 1.0 11.39895686915759 -8.771267857059037 24.98953892245008 1.0754659847268848 0.8362384370408525 0.5068270864586181 0.10774654181453377 126.6725301775059 322072.17551256553 0.02008151430381951 0.021505700640057836 1.6932931166399118e-09 8.771267857059037 -0.23922754768603227 SQS(ph)WEER ddPTM_A549_MK2206_60min_R1 2 SQSWEER 7 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.034)QS(0.966)WEER;SQS(1)WEER 103.26 0.01043 237180000.0 4564.7 3492.1000000000004 2223.4 2545.1000000000004 4587.5 3880.8999999999996 3468.3 3462.7 4811.6 5040.799999999999 5140.6 True False 5335.109763799789 3669.8329740349245 2538.711553015236 3168.649614253882 3912.684827024501 4291.574262067072 4098.445215597629 3953.5483290740017 3721.7802825463204 3902.0797790123565 3864.0471466575855 1.3807051418652274 0.9497381462359596 0.6570084309688691 0.8200338903718541 1.0125872378159224 1.1106423134043018 1.060661285963552 1.0231625492700924 0.9631819026239558 1.009842693660627 1.0 11.915896981794917 SQS(ph)WEER ddPTM_A549_PD325901_60min_R1 2 SQSWEER 7 0 Q6Y7W6;Q6Y7W6-3;I1E4Y6;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 SQS(1)WEER;S(0.001)QS(0.999)WEER 123.6 0.0062349 265880000.0 3834.4 3549.1000000000004 3760.8 3777.5 3332.2 4428.7 3215.83 2414.15 4282.3 3774.2 4862.4 True False 4223.665465263911 3848.1951125675323 4016.030503527566 4010.8275956750463 3098.1577674659343 4392.634135530803 3338.210170419699 2365.9978843859635 4102.329823099393 3535.8963678909995 4264.35562529318 0.9904580753565853 0.9024095199149728 0.9417672578026272 0.9405471654112564 0.7265242488430903 1.0300815695287617 0.7828170217839635 0.5548312786936709 0.9620046224023242 0.8291748340402313 1.0 12.058112041111206 -8.97236728001454 24.99968063921244 0.9832375511198945 0.8577903797044137 0.01602831923482073 0.13545511157509826 240.32044962462268 217422.98357515188 0.0222380217486575 0.023269046716936085 1.0656944891438062e-09 8.97236728001454 -0.12544717141548078 SQS(ph)WEERGDR ddPTM_A549_MK2206_60min_R1 4 SQSWEERGDR 10 1 Q6Y7W6;Q6Y7W6-3;I1E4Y6;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 SQS(1)WEERGDR;S(0.001)QS(0.999)WEERGDR;SQS(1)WEERGDR;S(0.066)QS(0.934)WEERGDR 139.19 5.8999e-08 238571000.0 7115.48 7626.47 4702.85 4534.49 10419.199999999999 6242.74 5492.0599999999995 5756.049999999999 9914.039999999999 10106.3 9386.31 True False 8316.399067216284 8014.624747712877 5369.784846225465 5645.440253560988 8886.549482230776 6903.342603204563 6489.896211623878 6571.987714663817 7668.525769468679 7823.279810869821 7055.430178022715 1.178723175961888 1.1359512525087416 0.7610853924898946 0.8001553570959047 1.2595333322001965 0.9784438976815479 0.9198441551926281 0.931479378129941 1.0868969823208972 1.1088310157527907 1.0 12.784518333009764 -8.771905166716605 24.839618731970845 1.0410346760812974 0.9916887024853426 0.035667950226301204 0.14608310583505874 754.410163564492 1790521.2380029461 0.02567812582641082 0.0274832129968369 1.6908100995113279e-09 8.771905166716605 -0.04934597359595483 SQS(ph)WEERGDR ddPTM_A549_PD325901_60min_R1 4 SQSWEERGDR 10 1 Q6Y7W6;Q6Y7W6-3;I1E4Y6;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 Q6Y7W6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 SQS(1)WEERGDR;SQS(1)WEERGDR;S(0.003)QS(0.997)WEERGDR;SQS(1)WEERGDR 139.48 4.9795e-08 251472000.0 14593.199999999999 14592.550000000003 12233.5 14767.2 13418.48 15514.300000000003 11391.599999999999 11059.06 15015.170000000002 15697.5 18269.5 True False 16074.690921053962 15822.315401058684 13063.73887601161 15679.336405255473 12476.01225604295 15387.956684549777 11825.113571722708 10838.478372635256 14384.134621560215 14706.357171047895 16022.467319902475 1.003259398200589 0.9875080463671678 0.8153387749328939 0.9785843897948989 0.7786573694892635 0.960398693741473 0.7380332464172993 0.6764550150882273 0.8977477896736175 0.9178584594633712 1.0 13.967808706827947 -9.971156861178626 1.2199452014093048 0.9835285756836198 0.8690193029591647 0.08215566469729352 0.10598574239610335 0.5390260201147741 1.613535383660661 0.03298073131923781 0.01963826311375368 1.0686688210645062e-10 9.971156861178626 -0.1145092727244551 SQSAAVT(ph)PSSTTSSTR ddPTM_A549_MK2206_60min_R1 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQSAAVT(0.901)PS(0.08)S(0.017)T(0.002)TSSTR 195.45 3.9813999999999994e-39 16053000.0 1197.5 1830.6 1507.8 1496.9 2353.0 1708.8 1638.0 1653.3 2640.1 2738.0 2298.1 True False 1399.6087239359115 1923.7697208752138 1721.6287126186803 1863.6405671983935 2006.876817000253 1889.6240817903613 1935.6033973845724 1887.6603380188994 2042.121565373377 2119.4838983764157 1727.4183456666135 0.8102314806641702 1.1136675291779583 0.9966483897415719 1.0788588484506407 1.1617781077957674 1.0939006677396101 1.1205180275178912 1.0927638592899442 1.1821812420229445 1.2269661855180214 1.0 10.754401801303967 -5.2585058110181055 24.42011821156917 1.0905958857044156 0.8102313373862906 0.6041141306935366 0.06786779325674357 110.27437869916666 917895.9818551057 0.009595694667283316 0.0923603777556982 5.5143482393389886e-06 5.2585058110181055 -0.28036454831812496 SQSAAVT(ph)PSSTTSSTR ddPTM_A549_PD325901_60min_R1 2 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQSAAVT(0.909)PS(0.088)S(0.002)T(0.001)TSSTR;SQS(0.001)AAVT(0.865)PS(0.13)S(0.004)TTSSTR 197.75 3.2365e-39 47482000.0 4447.4 4096.9 4547.3 4995.6 4889.2 5039.0 4738.799999999999 4035.8 4754.4 5477.4 5711.6 True False 4898.896773997165 4442.160141071798 4855.907123136274 5304.166866169227 4545.7994588243355 4997.964054675127 4919.137627170859 3955.3028029761467 4554.589101871365 5131.5560292210685 5009.109408815507 0.9779975588825472 0.8868163536723838 0.9694152646357429 1.058904175028489 0.9075065221822077 0.9977749828900193 0.9820383676414999 0.7896219627415662 0.909261253877938 1.02444478856662 1.0 12.290338407903288 SQSAAVTPS(ph)STTSSTR ddPTM_A549_MK2206_60min_R1 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQSAAVT(0.423)PS(0.533)S(0.031)T(0.008)T(0.002)S(0.002)ST(0.001)R 105.89 8.491799999999999e-07 16271000.0 1237.2 1081.7 1504.8 1017.4 1935.3 1423.6 1129.5 1666.7 1874.4 2084.9 2269.4 True False 1446.0091133640985 1136.753909685742 1718.2032675080175 1266.6630456728221 1650.6199336764068 1574.2444070908007 1334.7155295151858 1902.9598290546796 1449.8513928017342 1613.919641974064 1705.8453477463179 0.8476789031751896 0.6663874372829679 1.007244454943132 0.7425427207374206 0.9676257791230183 0.9228529474671416 0.7824364214953887 1.1155523749962328 0.8499313227410733 0.9461113483155423 1.0 10.736271142248528 -2.0000000000000004 0.11495952285662242 1.0079863689288655 0.3508934981062975 0.18878388787342903 0.11307520358497568 112.90362951064476 0.868105168631393 0.44492154297812986 11.890672519210245 0.00999999999999999 2.0000000000000004 -0.6570928708225681 SQSDLDDQHDYDS(ph)VASDEDTDQEPLR ddPTM_A549_PD325901_60min_R1 1 SQSDLDDQHDYDSVASDEDTDQEPLR 26 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 SQSDLDDQHDY(0.314)DS(0.529)VAS(0.099)DEDT(0.058)DQEPLR 41.89 0.022282 651580.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SQSDLDDQHDYDSVAS(ph)DEDTDQEPLR ddPTM_A549_MK2206_60min_R1 2 SQSDLDDQHDYDSVASDEDTDQEPLR 26 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 SQSDLDDQHDYDS(0.006)VAS(0.958)DEDT(0.035)DQEPLR;SQSDLDDQHDYDS(0.199)VAS(0.799)DEDT(0.003)DQEPLR 121.09 8.975e-18 40423000.0 545.53 531.92 404.56 556.68 942.45 881.13 680.5699999999999 698.6500000000001 1210.23 1418.37 1093.36 True False 637.6021270720312 558.9924559859847 461.9326913231288 693.0666249903146 803.8168534559653 974.370591753243 804.2207595592303 797.6857770258908 936.1148373401847 1097.9592318992538 821.8485367991163 0.7758146404388861 0.6801648125615861 0.5620654787830309 0.8433021341007999 0.978059602790826 1.1855841412678787 0.9785510633035357 0.9705994977282151 1.1390357169535223 1.3359629940761542 1.0 9.682728725599848 -6.648524307599292 2.594229950288153 1.0593677422901875 0.6749379993353792 0.714442138717859 0.1150357041414901 0.08736456194299895 1.1881629515524108 0.01226457376180396 0.028236980089319574 2.246341044055693e-07 6.648524307599292 -0.38442974295480825 SQSDLDDQHDYDSVAS(ph)DEDTDQEPLR ddPTM_A549_PD325901_60min_R1 2 SQSDLDDQHDYDSVASDEDTDQEPLR 26 0 J3QRU8;Q9Y2X7;Q9Y2X7-3;A0A0C4DGN6;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 SQSDLDDQHDYDSVAS(1)DEDTDQEPLR;SQSDLDDQHDYDS(0.004)VAS(0.996)DEDT(0.001)DQEPLR 181.63 1.4668e-57 85632000.0 1108.71 972.77 830.6700000000001 1468.88 1194.22 1325.71 843.91 1439.81 1499.47 1076.65 1653.49 True False 1221.2654230108365 1054.7487418366113 887.0442614244952 1559.609381531478 1110.342107035343 1314.91385729775 876.0254568552718 1411.0918600409052 1436.4524904473874 1008.6701352577612 1450.12121233671 0.8421816139375703 0.7273521226111853 0.6117035278693161 1.0755027705707028 0.7656891696978554 0.9067613425079906 0.6041049875021507 0.973085455226937 0.9905740832055708 0.6955764295264676 1.0 10.501957781542481 -8.484703135548761 23.913630700578967 0.9948268334360252 0.79514586813371 0.05159262433373868 0.15329040156226725 249.3626319898507 156203.70745633988 0.019035073030373745 0.023008882520989964 3.2756452695571744e-09 8.484703135548761 -0.19968096530231516 SQSES(ph)SDEVTELDLSHGK ddPTM_A549_MK2206_60min_R1 2 SQSESSDEVTELDLSHGK 18 0 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.2)QS(0.245)ES(0.278)S(0.278)DEVTELDLSHGK;S(0.057)QS(0.299)ES(0.544)S(0.1)DEVTELDLSHGK 221.83 2.0709999999999993e-64 14683400.0 2703.4 3315.1000000000004 2508.02 2791.37 3691.3 2908.8 3159.9 3254.2 4412.2 4463.3 4703.0 True False 3159.667828215735 3483.8244300630486 2863.6949488141004 3475.2557753093615 3148.3146598355424 3216.607285294828 3734.0129275918885 3715.4928155695297 3412.8437448355794 3455.037430103527 3535.1153038031807 0.8937948430752659 0.9854910323052399 0.8100711582825186 0.9830671637699001 0.8905833018935743 0.9099016605863769 1.0562634049233777 1.0510245059255334 0.9654122854674477 0.9773478750145707 1.0 11.787541556418727 -7.729552672624414 24.90642365238603 0.9943252160430082 0.9130881399145493 0.4546272150645486 0.052090950954435875 151.51799560599375 118349.05349018086 0.007645501639782767 0.011339564078871886 1.8640060919192937e-08 7.729552672624414 -0.08123707612845887 SQSESS(ph)DEVTELDLSHGK ddPTM_A549_MK2206_60min_R1 1 SQSESSDEVTELDLSHGK 18 0 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.002)QS(0.008)ES(0.165)S(0.825)DEVTELDLSHGK 164.27 1.2547e-23 5788900.0 1480.6 1295.6 919.18 1097.3 1800.9 1726.5 1306.9 1729.5 1787.8 1858.3 2021.7 True False 1730.489082805435 1361.5405060449723 1049.5335456060736 1366.1385492596692 1535.9899956378047 1909.1970840420524 1544.3468132123924 1974.6619213716124 1382.86615452995 1438.5087393545984 1519.6560939185395 1.1387373036114032 0.8959530458856286 0.6906388555977675 0.8989787588960246 1.010748419846195 1.2563349639977124 1.0162475703500693 1.2994136826575076 0.9099862528528629 0.9466015008996562 1.0 10.5695291558738 -6.75344692702511 6.920015359179086 1.01354621707442 0.8894672872802797 0.14716458231644303 0.15309421441012125 0.25246371373328974 58.74320211292837 0.02308395294575396 0.046554035449038265 1.764221348045303e-07 6.75344692702511 -0.12407892979414037 SQSESS(ph)DEVTELDLSHGKK ddPTM_A549_MK2206_60min_R1 2 SQSESSDEVTELDLSHGKK 19 1 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.001)QS(0.004)ES(0.149)S(0.845)DEVTELDLSHGKK;S(0.001)QS(0.005)ES(0.195)S(0.798)DEVTELDLSHGKK 134.81 2.1119000000000003e-17 23103000.0 3161.9 3371.3999999999996 3318.7 3582.8999999999996 4748.8 3203.2 3095.5 3318.5 5694.0 5403.4 6058.1 True False 3695.5514189669775 3542.9898595863065 3789.3415629179035 4460.710660842492 4050.2578106973206 3542.1604978879254 3657.9122811989887 3788.9075374800213 4404.31809144957 4182.76818717572 4553.7065749457915 0.8115479902239793 0.7780452695568079 0.8321444301586368 0.9795779739926684 0.8894419840271627 0.7778631406284873 0.803282385677767 0.8320491175971577 0.9671940910031077 0.9185414383502549 1.0 12.152825616868064 -8.806051427023176 4.694656600227724 0.985643880783994 0.8388127687350482 0.46566132261226867 0.05778484119924204 0.10756486496106107 5.109441662946551 0.010359731055166568 0.01110361384709911 1.562962553320217e-09 8.806051427023176 -0.14683111204894583 SQSESS(ph)DEVTELDLSHGKK ddPTM_A549_PD325901_60min_R1 2 SQSESSDEVTELDLSHGKK 19 1 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.001)QS(0.004)ES(0.177)S(0.818)DEVTELDLSHGKK;SQS(0.001)ES(0.117)S(0.882)DEVTELDLSHGKK 140.87 3.6198000000000004e-21 56381000.0 6352.8 5496.5 6053.4 5955.1 6408.700000000001 6145.700000000001 6614.6 5794.6 5991.0 5301.700000000001 5975.3 True False 6997.731579315817 5959.709344968427 6464.220126051307 6322.933001986622 5958.575020814758 6095.651456800344 6866.322222648008 5679.022157224242 5739.219104263699 4966.949757206219 5240.375980547536 1.3353491438957144 1.137267510402132 1.2335412859777093 1.2065800288867778 1.1370510518583405 1.1632088001753351 1.3102728216708197 1.0837050964100623 1.0951922391767093 0.9478231668192731 1.0 12.355454608984408 -9.046968283702352 0.4161379807395561 0.9939585512271089 1.2287170773247442 0.6318962650111746 0.06881263205771189 0.4733829970629884 0.20971353687168157 0.039182251985015765 0.028611419034360562 8.974943356469039e-10 9.046968283702352 0.23475852609763537 SQSEYKPDT(ph)PQSGLEYSGIQELEDRR ddPTM_A549_MK2206_60min_R1 1 SQSEYKPDTPQSGLEYSGIQELEDRR 26 2 Q16513-3;Q16513-2;Q16513;Q16513-5;Q16513-4 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 S(0.001)QS(0.001)EY(0.002)KPDT(0.961)PQS(0.029)GLEYS(0.006)GIQELEDRR 48.449 0.0036334 5804400.0 1256.5 1467.7 1242.3 1112.0 1869.3 1874.0 1912.4 1491.1 2068.1 2106.4 2507.4 True False 1468.5664815244018 1542.3996609464382 1418.4768203251 1384.4400499195763 1594.3284462467361 2072.3054361394766 2259.8583254934406 1702.4679913022337 1599.678652077072 1630.5627770416654 1884.7433792804804 0.7791864386784803 0.8183605672276003 0.7526100560526271 0.7345509553921872 0.8459127453496544 1.0995159653674442 1.1990270666748086 0.9032890153736303 0.8487514372846691 0.8651378192739156 1.0 10.88015238871695 -7.011066326141687 18.36160436426444 0.958615455128217 0.7753465094700727 0.5035648442393867 0.0987553179555436 13.27935099715196 22036.55004981158 0.01637916728325518 0.029526976884237298 9.748407471241291e-08 7.011066326141687 -0.18326894565814433 SQSGEDES(ph)MNQPGPIK ddPTM_A549_PD325901_60min_R1 1 SQSGEDESMNQPGPIK 16 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 S(0.009)QS(0.484)GEDES(0.507)MNQPGPIK 138.01 4.1078999999999993e-11 9230900.0 2098.7 1873.7 1780.3 2299.0 2624.5 2302.5 2026.2 2308.8 2064.1 2254.2 2866.1 True False 2311.758479018718 2031.603274750721 1901.1218638135833 2441.0040085921714 2440.1641740334744 2283.7492033914423 2103.3081497791845 2262.7491727814395 1977.353055101102 2111.869427295822 2513.5878697048347 0.9197046607685065 0.8082483605354477 0.7563379369891804 0.9711234041238485 0.9707892862802595 0.9085615151618384 0.836775262615415 0.9002069114246439 0.786665578288814 0.8401812615143684 1.0 11.295532408138014 -11.053417099393492 1.3693519830150862 0.9997390589966109 0.8638906696150904 0.0 0.08213563448503747 0.42082770278473847 1.4118153163529268 0.05214879985191356 0.011703539168878327 8.842659468162695e-12 11.053417099393492 -0.13584838938152044 SQSGS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 SQSGSPVR 8 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 S(0.083)QS(0.145)GS(0.772)PVR 48.442 0.035461 56066000.0 1430.1 1026.9 1405.8 1268.5 1264.0 1127.5 691.3 1215.6 1068.8 1252.3 1728.8 True False 1575.2826992160224 1113.440466905863 1501.2060417621394 1346.8523640274766 1175.2210005632737 1118.3180138214339 717.6077997938752 1191.3539043802477 1023.8820528521192 1173.229564281145 1516.168559766134 1.0389891605844976 0.7343777574952545 0.9901313624348586 0.8883262717406737 0.7751255577707991 0.7375947790356056 0.47330344319009277 0.7857661318105763 0.6753088541883833 0.7738120914881083 1.0 10.56621443844842 -5.248012269299326 22.992035293079955 0.8118700462145849 1.038989628508526 0.18812960543713086 0.14183655809169357 1149.3003159707641 1967905.22816586 0.022841759342661326 0.5499463604608555 5.649210149435396e-06 5.248012269299326 0.22711958229394114 SQSGS(ph)PVRYQQETSVSQLPGRPKS(ph)PLSK ddPTM_A549_PD325901_60min_R1 2 SQSGSPVRYQQETSVSQLPGRPKSPLSK 28 3 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 2 S(0.305)QS(0.305)GS(0.347)PVRY(0.007)QQET(0.018)S(0.019)VS(0.005)QLPGRPKS(0.978)PLS(0.017)K;S(0.286)QS(0.32)GS(0.359)PVRY(0.009)QQET(0.02)S(0.02)VS(0.102)QLPGRPKS(0.826)PLS(0.058)K 49.193000000000005 0.0032381 12141100.0 1832.56 2226.4 2200.6 2233.7 2934.3999999999996 3007.7 2822.8 2393.7 3186.4 2565.3999999999996 2484.0 True False 2018.6001421406302 2414.0265415514796 2349.945949282802 2371.6705758992316 2728.297867130437 2983.206288399756 2930.2231986954284 2345.955775678678 3052.486689004483 2403.4202061860956 2178.4837473733687 0.9266078503337413 1.1081223554970783 1.0787071292664763 1.0886794903835253 1.2523838520346953 1.3693957056125177 1.3450746200096482 1.0768755004517399 1.4011978251776784 1.1032536777398207 1.0 11.089108634696757 -5.775546359781455 1.0193490590094854 1.2107035250931484 0.9377748244498655 0.3034410338667197 0.12566723823856965 1.2224740622711359 1.617730962708691 0.024808942678893317 0.296939325284567 1.6766933436380304e-06 5.775546359781455 -0.2729287006432829 SQSIEQES(ph)QEK ddPTM_A549_PD325901_60min_R1 1 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 SQS(0.264)IEQES(0.736)QEK 182.37 1.524e-18 22968000.0 4244.1 3661.8 3760.3 4019.4 3592.7 3848.6 4283.9 4139.9 4243.4 3786.8 4361.9 True False 4674.957907658713 3970.392737088218 4015.4965705208197 4267.669209280284 3340.361146142147 3817.2582775992614 4446.926158740027 4057.3264468112766 4065.064654820995 3547.7008017406706 3825.413952362276 1.222078960832938 1.0378988487341125 1.0496894246023136 1.1156097777718685 0.8732025312134917 0.997868028175623 1.1624692684549742 1.06062415658462 1.0626469985844877 0.9274031113808973 1.0 11.901400156573738 SQSLPT(ph)TLLSPVR ddPTM_A549_MK2206_60min_R1 2 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.002)QS(0.287)LPT(0.57)T(0.141)LLSPVR;S(0.001)QS(0.151)LPT(0.424)T(0.424)LLSPVR 113.53 2.3978000000000003e-05 52846000.0 1936.1 2551.5 2346.2 1409.98 2994.8999999999996 2081.64 2103.05 2003.03 3175.0 3021.2 2917.2 True False 2262.8663468996388 2681.3604516623564 2678.926439544997 1755.4251632964067 2554.3541773200413 2301.917763119201 2485.1469626798703 2286.965636522107 2455.867569433154 2338.708821685472 2192.778729375853 1.031962922927356 1.2228139646473004 1.2217039520022706 0.8005482449184769 1.1648937227912213 1.0497720231782863 1.133332300877999 1.0429532199872549 1.11997965710484 1.066550304576858 1.0 11.098544523423268 -10.905533195197284 1.0547123452832976 0.9978510824295544 1.0907638911707296 0.02105041313948708 0.11215217362172376 1.161388827203922 2.204557785141919 0.08303602739387285 0.017958700258695684 1.2429876247448255e-11 10.905533195197284 0.09291280874117513 SQSLPT(ph)TLLSPVR ddPTM_A549_PD325901_60min_R1 1 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 S(0.28)QS(0.015)LPT(0.351)T(0.351)LLS(0.003)PVR 48.028 0.035327 2079700.0 1281.7 1029.7 1046.1 754.26 1097.7 1212.8 981.51 991.31 922.53 1163.8 1430.6 True False 1411.8172404623294 1116.4764327324638 1117.0946367103238 800.8489271512534 1020.6013388594201 1202.923358902558 1018.861900152881 971.5375443823486 883.7592722844917 1090.3174693846495 1254.645269320588 1.1252720390257023 0.8898741819965215 0.8903669140802242 0.6383070551765814 0.8134580855767249 0.9587756701573199 0.8120716867681749 0.7743523752402565 0.704389753737375 0.8690244932538382 1.0 10.293063807776528 -5.200130027201132 2.1570726354427694 0.8391376954880244 1.231283267853924 0.4241615590806681 0.0988771669945264 0.7974676642600494 3.597359122133015 0.01753342186758744 0.635035134715323 6.307684649512023e-06 5.200130027201132 0.39214557236589964 SQSLPTTLLS(ph)PVR ddPTM_A549_MK2206_60min_R1 4 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 SQSLPTTLLS(1)PVR;SQSLPTTLLS(1)PVR;SQS(0.001)LPT(0.101)T(0.069)LLS(0.829)PVR;SQSLPTTLLS(0.999)PVR 103.76 0.00011968 8439000.0 4762.5 4583.9 3888.8999999999996 4166.49 5182.0 4138.76 4676.4 4355.92 7110.799999999999 5849.700000000001 6356.3 True False 5566.293568054091 4817.200930580076 4440.404496951044 5187.280237040845 4419.734664553889 4576.720836113456 5526.041347697934 4973.384999445528 5500.215153614256 4528.248707206905 4777.855285044471 1.165019289193955 1.0082350015201933 0.9293719110434953 1.0856922044662898 0.9250457372345364 0.957902775004383 1.1565945425336377 1.0409241600542192 1.1511891477397607 0.9477576102778 1.0 12.22214744178189 -7.744670632759211 24.99703568018967 1.0762473961444752 1.0073702673154534 0.05285185396764214 0.08630778325335062 389.8275407841201 581111.3928083585 0.012873358044736985 0.019065836591398978 1.800235689267272e-08 7.744670632759211 -0.06887712882902175 SQSLPTTLLS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 SQSLPTTLLSPVR 13 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 SQSLPTTLLS(1)PVR;SQSLPT(0.001)T(0.001)LLS(0.998)PVR 177.88 3.3357e-22 18162800.0 4090.0 4209.0 3559.5 4442.700000000001 4165.2 3654.6000000000004 3598.6 3746.3 4339.4 5183.4 4808.0 True False 4505.213789101136 4563.707201486784 3801.069075012328 4717.115488896234 3872.6507211599287 3624.8381492787707 3735.5466922294795 3671.577107584503 4157.030108669987 4856.119239395421 4216.64648042317 1.0684352624811475 1.0823072843964816 0.9014436217642946 1.1186888705981437 0.9184195874943922 0.8596495262545683 0.8859046423675032 0.8707339172564532 0.985861662335231 1.1516543447360745 1.0 12.04188035718746 -5.739685712358078 24.7642162523149 0.9677237823776126 1.0753714054390218 0.1745944999222655 0.09179685491614793 242.90318596565612 276514.330637053 0.010478483231892599 0.04050951569006301 1.8210182054878491e-06 5.739685712358078 0.10764762306140918 SQSPAAS(ph)DCSSSSSSASLPSSGR ddPTM_A549_MK2206_60min_R1 1 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.001)QS(0.016)PAAS(0.299)DCS(0.299)S(0.299)S(0.059)S(0.012)S(0.012)S(0.002)ASLPSSGR 101.53 4.6625e-10 31994000.0 582.27 565.88 571.75 421.6 795.39 503.17 491.47 523.4 691.99 720.2 728.95 True False 680.5429408652715 594.6808749310965 652.8327473403169 524.8920189263432 678.3891846467614 556.4151154227856 580.763737309277 597.5935528452744 535.2553698809597 557.5063197993768 547.931597003472 1.2420217132704598 1.0853195511689542 1.1914493540991764 0.9579517257206417 1.2380910105508347 1.0154828056379814 1.0599201442029578 1.0906353203819485 0.9768653109405699 1.0174743030850328 1.0 9.097851990217018 -3.534164189142814 0.20306142779349018 0.9710453397414573 1.6289163910836832 0.3624425053698389 0.07771801574305517 17.40341156374439 0.33429874554519445 0.05977601267439971 3.255571226990557 0.0002923047083284051 3.534164189142814 0.6578710513422259 SQSS(ph)DTEQQS(ph)PTSGGGK ddPTM_A549_MK2206_60min_R1 4 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.001)QS(0.079)S(0.904)DT(0.016)EQQS(0.729)PT(0.237)S(0.034)GGGK;S(0.019)QS(0.135)S(0.837)DT(0.008)EQQS(0.995)PT(0.004)S(0.001)GGGK;S(0.001)QS(0.118)S(0.881)DT(0.001)EQQS(0.999)PTSGGGK;S(0.033)QS(0.172)S(0.772)DT(0.023)EQQS(0.982)PT(0.015)S(0.004)GGGK 164.53 1.2332e-22 93802000.0 2961.0199999999995 2886.33 2995.7200000000003 2959.59 3926.19 3001.9399999999996 3095.21 2558.5 4271.13 4645.84 4310.33 True False 3460.767786011448 3033.231868487793 3420.5581423040403 3684.689682861043 3348.652651992442 3319.6032982735014 3657.5695919528116 2921.1752100776353 3303.725874593081 3596.341517323989 3239.956101943857 1.0681526777276742 0.9361953597667458 1.05574212571949 1.1372653106782409 1.0335487724612598 1.024582801070008 1.128894798839528 0.9016095027722861 1.0196822952665823 1.1099969888994217 1.0 11.66175855087787 -8.244599112288697 24.992443000440627 1.001477739971384 1.0515569117798815 0.09743462465484032 0.06746304450341589 1248.939472986028 1853538.1789997534 0.009248673524755899 0.011923297363697226 5.693782689349605e-09 8.244599112288697 0.050079171808497636 SQSS(ph)DTEQQS(ph)PTSGGGK ddPTM_A549_PD325901_60min_R1 3 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.004)QS(0.255)S(0.74)DT(0.001)EQQS(0.983)PT(0.016)S(0.002)GGGK;SQS(0.061)S(0.939)DTEQQS(0.991)PT(0.009)SGGGK;S(0.001)QS(0.057)S(0.941)DTEQQS(0.996)PT(0.004)SGGGK 256.33 3.1068999999999993e-86 175931000.0 7890.9 7701.4 8796.1 7850.0 9415.599999999999 8479.0 8774.7 8489.1 9019.6 9174.0 9578.3 True False 8691.978359026441 8350.424006065647 9393.05624124623 8334.876671356478 8754.280738056617 8409.949835203488 9108.62601020008 8319.778240929883 8640.537578503898 8594.752074355367 8400.229821846342 1.0347310184801557 0.9940708984352825 1.1181903876984247 0.9922200758936498 1.042147765444405 1.00115711278897 1.0843305723030843 0.9904226928759462 1.0286072835808124 1.0231567774494852 1.0 13.036213083779955 -11.279295934879949 0.2555963816540818 0.9756450872511998 1.038060063298129 0.03749404034297055 0.038482632304714146 12.130393421012919 0.8042330866398896 0.23383071695797833 0.023149030451523923 5.256589523014767e-12 11.279295934879949 0.06241497604692914 SQSS(ph)DTEQQSPT(ph)SGGGK ddPTM_A549_MK2206_60min_R1 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.001)QS(0.235)S(0.763)DT(0.001)EQQS(0.251)PT(0.698)S(0.051)GGGK 196.71 7.005099999999999e-48 43355000.0 1188.3 1327.9 1505.2 1456.3 1813.1 1028.0 939.99 1298.6 1707.2 2400.7 1377.8 True False 1388.855988854315 1395.4844380805187 1718.6599935227725 1813.0935653757913 1546.3953917990461 1136.7822776688279 1110.7740155723588 1482.6805267957084 1320.5219258381992 1858.3802026414373 1035.6542346544807 1.3410421571033995 1.3474424102037164 1.6594920737191396 1.7506746023016873 1.493157986569679 1.097646530695726 1.0725336491700244 1.4316366188473768 1.2750606154560429 1.7944021667245322 1.0 10.016326707367233 -7.225039399736 6.635712125309549 1.1512408041928344 1.5312061926873948 0.08047824549115479 0.24776068969748655 0.13670321916965528 18.75581274923276 0.026474507330828827 0.04566988374172327 5.9560810676905895e-08 7.225039399736 0.3799653884945604 SQSS(ph)DTEQQSPTSGGGK ddPTM_A549_MK2206_60min_R1 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.054)QS(0.198)S(0.736)DT(0.012)EQQSPTSGGGK 142.93 9.797e-17 12400000.0 2206.2 2384.3 2117.0 2662.9 2744.9 2349.3 2304.3 2260.0 3007.5 3440.7 3528.2 True False 2578.5526235886477 2505.6506858312955 2417.222433090426 3315.310619542123 2341.128846147042 2597.901366660871 2722.961482657676 2580.361920959725 2326.306051990618 2663.443480330068 2652.0505666337185 0.9722863719230049 0.9447974776030571 0.9114541266679681 1.2500932905477322 0.8827617676682036 0.9795821389478333 1.0267381462918204 0.9729685977424674 0.8771725853415487 1.0042958885624909 1.0 11.372892568233329 -8.529033689459034 24.708832387680033 0.9411072411868132 0.9954119868548964 0.015291555250980249 0.09557429190630992 320.3061474933411 1285852.6809313728 0.01604840794080569 0.018221863244995074 2.9577830140052897e-09 8.529033689459034 0.05430474566808319 SQSS(ph)DTEQQSPTSGGGK ddPTM_A549_PD325901_60min_R1 3 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQS(0.001)S(0.997)DT(0.001)EQQSPTSGGGK;SQSS(1)DTEQQSPTSGGGK;S(0.032)QS(0.176)S(0.75)DT(0.042)EQQSPTSGGGK 452.14 0.0 651764000.0 26283.9 24876.9 24876.5 23709.3 32755.7 27834.0 27676.0 28670.0 27217.1 29520.4 30457.9 True False 28952.222178815504 26973.363668488157 26564.76888454677 25173.7696132729 30455.052633030402 27607.32913233329 28729.22532488831 28098.1543588201 26073.259937014787 27656.476906017033 26711.77138853594 1.0838750361288698 1.0097931461057834 0.9944967145064644 0.9424223218710567 1.1401360168162036 1.0335267074119128 1.0755267745821684 1.0519015736589885 0.9760962520143764 1.0353666368186476 1.0 14.70518803087695 -8.761158498749369 24.999792425797416 0.9887121176176689 1.0396978869489903 0.07742807003179375 0.05078775747018334 9.363695500335238 833371.4706009885 0.008339865516705137 0.009171214785998548 1.733171349547174e-09 8.761158498749369 0.050985769331321484 SQSS(ph)S(ph)QFR ddPTM_A549_PD325901_60min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 2 S(0.099)QS(0.252)S(0.688)S(0.961)QFR 64.803 0.010653 22217000.0 1357.0 1283.4 1321.4 1540.0 1588.0 1256.3 1306.7 1656.0 1700.0 1469.4 1749.1 True False 1494.7616410293997 1391.5566220926912 1411.0781502237085 1635.1223024062394 1476.4643583025943 1246.0691093249377 1356.4271835536774 1622.9697808931305 1628.5549119092464 1376.6218332306266 1533.9717884584365 0.974438807985875 0.9071592010770515 0.9198853335117526 1.0659402700289906 0.9625107641558165 0.8123155319415448 0.884258233273519 1.0580180112204882 1.0616589719331546 0.897423175307586 1.0 10.583056234891869 -8.269433984443234 24.89476158689659 1.032097889056246 0.9325898276318046 0.14629814445363953 0.07308287824395067 497.0117790611933 1547665.1844588206 0.01076316105009539 0.013129004260854683 5.3773216566067775e-09 8.269433984443234 -0.09950806142444135 SQSS(ph)SQFR ddPTM_A549_MK2206_60min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.024)QS(0.11)S(0.636)S(0.23)QFR 66.683 0.008364299999999998 118340000.0 5919.4 5962.1 5609.2 6465.0 8468.2 5936.4 5721.5 6086.4 9476.3 9722.0 9577.1 True False 6918.4500045647 6265.545423811924 6404.668904908281 8048.925290224879 7222.538997756708 6564.5859077365985 6761.02248970442 6949.1658388182595 7329.933180541538 7525.793447777757 7198.841755486591 0.9610504355498313 0.8703546537936667 0.8896804683929839 1.1180861538025055 1.0032918131937067 0.9118947367794833 0.9391819850118962 0.9653172100250653 1.0182100717737037 1.045417263414907 1.0 12.813549090101182 -2.000001172590223 0.24313844539711296 1.008549278004138 0.40696176099665304 0.14608554978382937 0.06384440483987128 61.170452542081094 0.7366710273877487 0.03229084714065325 15.148478315119469 0.00999997300014877 2.000001172590223 -0.601587517007485 SQSS(ph)SQFR ddPTM_A549_PD325901_60min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.004)QS(0.02)S(0.542)S(0.435)QFR 84.81700000000001 0.0030934 148590000.0 7969.6 8570.4 8258.7 8679.3 10151.0 8730.3 8592.2 9805.1 9359.7 10488.0 10956.0 True False 8778.667925090573 9292.657685821412 8819.185045597504 9215.400648879531 9438.028779048887 8659.203331321742 8919.18087283225 9609.529588547859 8966.344358233511 9825.785890106727 9608.481455806203 0.9136373906186611 0.9671307301328094 0.9178541985183576 0.9590902257828534 0.9822601856972608 0.90120414668534 0.928261236060624 1.0001090841197413 0.933169762513861 1.0226158977669892 1.0 13.230092727181653 -11.086778208590472 0.6334759062560456 1.0144510982178934 0.9440116142991031 0.42182506869255276 0.02960716196873993 1.291941710247533 0.6054522052658824 0.055334224038972306 0.005581760172322757 8.18882879607691e-12 11.086778208590472 -0.07043948391879029 SQSSDT(ph)EQQS(ph)PTSGGGK ddPTM_A549_PD325901_60min_R1 2 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.224)QS(0.226)S(0.249)DT(0.306)EQQS(0.958)PT(0.031)S(0.006)GGGK;S(0.049)QS(0.244)S(0.274)DT(0.442)EQQS(0.979)PT(0.011)S(0.003)GGGK 55.126999999999995 0.016544999999999997 11555000.0 556.41 318.45000000000005 481.66999999999996 522.25 372.28 403.05 575.5699999999999 611.9300000000001 523.37 537.51 843.0999999999999 True False 612.8963335926072 345.2868991003724 514.3590227170079 554.5081963841938 346.13233709627843 399.7676944308016 597.4736313139892 599.7245761002017 501.37457896820126 503.5715268679696 739.4040448512421 0.8289058436458966 0.4669799976139424 0.6956399904743418 0.7499393602800118 0.4681234022271483 0.5406620334505059 0.8080475559667687 0.8110918249316015 0.6780793024591458 0.6810505438461338 1.0 9.53021912547038 -11.40139490913679 0.31477156824480584 1.2405955644578635 0.6285934172931269 0.013669661378014508 0.15483418411270106 3.1806290040678444 0.28193376791623337 0.7164045927765696 0.05030825178062951 3.968305426291011e-12 11.40139490913679 -0.6120021471647366 SQSSDTEQQS(ph)PTSGGGK ddPTM_A549_MK2206_60min_R1 9 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQSSDT(0.005)EQQS(0.951)PT(0.037)S(0.007)GGGK;SQSSDTEQQS(0.988)PT(0.011)S(0.001)GGGK;SQSSDTEQQS(0.999)PT(0.001)SGGGK;SQSSDT(0.001)EQQS(0.477)PT(0.477)S(0.045)GGGK;S(0.008)QS(0.008)S(0.008)DT(0.197)EQQS(0.748)PT(0.028)S(0.004)GGGK;SQSSDTEQQS(0.994)PT(0.005)S(0.001)GGGK;SQSSDTEQQS(0.998)PT(0.002)SGGGK;S(0.001)QS(0.006)S(0.006)DT(0.034)EQQS(0.921)PT(0.027)S(0.005)GGGK;S(0.001)QS(0.001)S(0.001)DT(0.015)EQQS(0.827)PT(0.109)S(0.045)GGGK 386.36 1.7786999999999987e-302 1073819480.0 16673.829999999998 17229.1 17349.719999999998 16910.22 22837.49 16175.48 16331.390000000001 16988.96 25686.64 26695.9 26899.789999999997 True False 19487.964867995255 18105.987598563926 19810.17118178444 21053.224659128613 19478.125473640066 17887.158557185372 19298.59216606375 19397.197106507938 19868.657053135263 20665.27764889222 20219.829746564264 0.9638045973807783 0.8954569759243636 0.9797397619112281 1.0412167126533771 0.9633179763518914 0.8846344791911387 0.9544389051714419 0.9593155506071406 0.9826322625941659 1.0220302499037435 1.0 14.303483229173091 -8.906195678167405 1.8555895966607157 0.993648267991491 0.954366876043671 0.20718582159257803 0.039970658318993324 0.45952586221432307 3.132427760778484 0.007993563209794306 0.00819100929760525 1.241092987751207e-09 8.906195678167405 -0.03928139194781999 SQSSDTEQQS(ph)PTSGGGK ddPTM_A549_PD325901_60min_R1 8 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQSSDTEQQS(0.993)PT(0.007)SGGGK;SQSSDTEQQS(1)PTSGGGK;SQSSDTEQQS(0.999)PT(0.001)SGGGK;SQSSDTEQQS(0.999)PTSGGGK;SQSSDT(0.001)EQQS(0.957)PT(0.034)S(0.007)GGGK;S(0.001)QS(0.001)S(0.001)DT(0.004)EQQS(0.889)PT(0.089)S(0.016)GGGK;SQSSDTEQQS(0.98)PT(0.017)S(0.002)GGGK;S(0.002)QS(0.013)S(0.013)DT(0.102)EQQS(0.784)PT(0.043)S(0.043)GGGK 360.07 2.9898999999999988e-245 1431033700.0 16879.2 15990.689999999999 19226.03 19234.150000000005 20928.16 17484.190000000002 20399.25 20879.100000000002 19431.17 19961.11 20827.609999999997 True False 18592.763958189706 17338.281565631427 20530.824011310386 20422.199761575957 19458.238239832524 17341.80455350473 21175.554621647916 20462.64997116292 18614.545498613865 18700.762108015668 18265.946007097828 1.0178921995589434 0.9492134466451436 1.12399456361759 1.1180477459880942 1.065274047797546 0.9494063185539916 1.1592914275241735 1.1202622608876371 1.0190846667005682 1.0238047402937072 1.0 14.156868853446811 -8.972221641356839 22.1054346778549 1.008419542833061 1.0629600631096945 0.09814238167663036 0.06571283410440862 79.8292697604753 63527.88893710069 0.011653535954764507 0.012189296663464862 1.0660519248197305e-09 8.972221641356839 0.054540520276633586 SQSSDTEQQSPTSGGGK ddPTM_A549_PD325901_60min_R1 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 209.41 1.8641999999999999e-54 3904900.0 1279.9 1266.5 1193.3 1171.9 1335.6 1239.0 1749.6 1235.9 1564.1 1675.3 1607.3 False True 1409.8345057874187 1373.2323997821368 1274.2845138958314 1244.2856014219944 1241.7920635698647 1228.9099947891414 1816.1819854178557 1211.2490049552064 1498.3663163042659 1569.521272091513 1409.6122895141766 1.0001576435413448 0.9741915631676437 0.9039964558871816 0.8827147795730682 0.8809458265987797 0.8718070947101956 1.2884266112945166 0.8592781248896914 1.0629634314699954 1.11344181926255 1.0 10.461082692029553 SQSSHSYDDS(ph)TLPLIDR ddPTM_A549_MK2206_60min_R1 2 SQSSHSYDDSTLPLIDR 17 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 SQSSHSYDDS(0.594)T(0.406)LPLIDR;SQSSHSYDDS(0.704)T(0.296)LPLIDR 112.32 1.0519e-09 8586800.0 810.78 832.86 802.17 727.37 1309.22 894.52 739.8199999999999 843.54 1390.74 1540.85 1429.5900000000001 True False 947.6198423321562 875.2490165673166 915.9297681398901 905.5756826528802 1116.635472313247 989.1775126656802 874.2357176148073 963.1143782329058 1075.7396105554226 1192.770914833199 1074.5833483231959 0.881848619570407 0.814500818324679 0.8523580507450889 0.8427226087822419 1.0391334223219355 0.9205219066619775 0.8135578491691542 0.8962677299399541 1.001076009817229 1.1099845504719812 1.0 10.069561672080244 -8.004554067433812 0.3589433959008116 1.016525454352879 0.837514068592029 0.4596316966591002 0.0693988543701367 0.9447013037815668 0.29529157123208255 0.034012266200264284 0.06063746777804826 9.895686599813136e-09 8.004554067433812 -0.17901138576084996 SQSSS(ph)QFR ddPTM_A549_PD325901_60min_R1 1 SQSSSQFR 8 0 Q16537-2;Q16537 Q16537-2 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 SQS(0.129)S(0.432)S(0.439)QFR 80.986 0.0038064 152660000.0 8341.5 7923.9 9251.6 9020.8 9520.3 10112.0 8643.3 9892.4 9498.5 10438.0 9820.0 True False 9188.322939312258 8591.674861929472 9879.469210390238 9577.994328276756 8851.626971252013 10029.65122462291 8972.225511295246 9695.088321562329 9099.31107692351 9778.94289863978 8612.202254108886 1.0668958610358348 0.9976164758358269 1.1471478396453982 1.112142289007099 1.0278006379876758 1.1645861219571054 1.041803855339625 1.125738578298808 1.0565603092498466 1.1354752954128824 1.0 13.07216648567833 -9.772718133072036 0.8418579516492369 1.0067767123035587 1.0845566279911463 0.0 0.062332590170324664 0.4782017890367407 0.7071038401063655 0.017300608229026338 0.00970084066972719 1.6876479916861043e-10 9.772718133072036 0.07777991568758758 SQSST(ph)SPEGQALENR ddPTM_A549_PD325901_60min_R1 1 SQSSTSPEGQALENR 15 0 O60239-2;O60239 O60239-2 SH3BP5 SH3 domain-binding protein 5 1 SQS(0.061)S(0.221)T(0.497)S(0.221)PEGQALENR 145.7 1.3339e-13 6663500.0 1093.1 1288.6 1154.7 1178.7 1606.7 1013.3 1232.9 1206.8 1228.9 1144.8 1891.4 True False 1204.0707073023113 1397.1948443420924 1233.064885775175 1251.5056219780745 1493.850934814093 1005.0480207585441 1279.8186841687666 1182.729427283714 1177.253606614866 1072.5171326272095 1658.7697905724576 0.7258817432928862 0.8423078671211555 0.7433610696211391 0.754478185635493 0.9005776107717458 0.6058996410898538 0.771546896647478 0.7130160158484333 0.7097148822613801 0.6465738276177995 1.0 10.6958979629722 -10.753857025268344 0.9438196817075754 1.0039353331807268 0.7521804226631862 0.0 0.1256069160426334 0.29549111218858753 0.4558326197238966 0.05140720611018177 0.012336165254648415 1.762556204655927e-11 10.753857025268344 -0.2517549105175406 SQSSTS(ph)PEGQALENR ddPTM_A549_MK2206_60min_R1 2 SQSSTSPEGQALENR 15 0 O60239-2;O60239 O60239-2 SH3BP5 SH3 domain-binding protein 5 1 SQSS(0.005)T(0.024)S(0.971)PEGQALENR;SQS(0.006)S(0.029)T(0.145)S(0.819)PEGQALENR 96.67299999999999 1.6519000000000002e-05 8182800.0 1561.3400000000001 1824.97 1582.8899999999999 1332.65 2879.5 1515.6799999999998 1609.28 1584.27 2434.94 2549.8 2742.6000000000004 True False 1824.8560209019583 1917.8531779228877 1807.3676037385471 1659.1493098249327 2455.9293644505847 1676.0682515730423 1901.665345142273 1808.8451241233909 1883.4299778001769 1973.7984090869911 2061.53672809071 0.8851920977377138 0.9303026969105253 0.8767089031745938 0.804811909105084 1.1913100217841577 0.8130188653613419 0.922450383362075 0.8774256114266036 0.9136048619150791 0.9574403318610881 1.0 11.009504448998575 -10.535464245488983 0.8239578505307766 1.0005962673715676 0.9138286017282058 0.05756979671650164 0.09748711355663976 1.1891268196109486 1.4368121575856767 0.06250548337448442 0.01726449540329529 2.914310053641782e-11 10.535464245488983 -0.0867676656433618 SQSSTS(ph)PEGQALENR ddPTM_A549_PD325901_60min_R1 1 SQSSTSPEGQALENR 15 0 O60239-2;O60239 O60239-2 SH3BP5 SH3 domain-binding protein 5 1 SQSS(0.005)T(0.031)S(0.964)PEGQALENR 157.91 1.5967000000000001e-19 5796600.0 914.37 1044.7 1096.6 819.92 1181.7 1306.0 1127.1 1055.7 1618.9 1148.5 1165.9 True False 1007.1961692763823 1132.7405353749693 1171.0218703914934 870.5645962265736 1098.7014686436876 1295.3643690029207 1169.9924072727858 1034.643235319371 1550.8632628763996 1075.9835139957645 1022.5016912490371 0.9850312991131014 1.1078128721638298 1.145251768690017 0.8514065098152896 1.074522886413585 1.2668579231595873 1.1442449604592648 1.0118743510883608 1.516734178680861 1.0523048746074901 1.0 9.99788751409276 -7.15098072466257 5.123730869782297 1.2232513164507852 1.0294172745265215 0.09703433653557247 0.1571881871703667 0.3256143400453677 12.757776967157781 0.03001183231606743 0.052641395296959506 7.063489035245582e-08 7.15098072466257 -0.19383404192426368 SQST(ph)TFNPDDMSEPEFKR ddPTM_A549_PD325901_60min_R1 3 SQSTTFNPDDMSEPEFKR 18 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.002)QS(0.249)T(0.449)T(0.301)FNPDDMSEPEFKR;S(0.017)QS(0.345)T(0.498)T(0.14)FNPDDMSEPEFKR;S(0.096)QS(0.337)T(0.439)T(0.123)FNPDDMS(0.005)EPEFKR 149.64 2.7144000000000003e-17 73074000.0 16756.1 19603.8 16878.1 20239.8 19919.7 22997.2 20133.2 22162.300000000003 20669.7 21909.6 24406.699999999997 True False 18457.166936811125 21255.88102554209 18023.549362260317 21489.96647807909 18520.608991234374 22809.91842789735 20899.379943309785 21720.255540512 19801.024389817976 20526.224116884274 21404.830626818653 0.8622897914308032 0.9930413090449807 0.8420318607743692 1.003977412984234 0.8652537043684632 1.0656434907416752 0.9763861395438664 1.0147361555525762 0.9250726966747764 0.9589528866052529 1.0 14.385648799302196 -7.234371555238805 24.997259259059458 0.9752651845550765 0.9188240557346837 0.2785684120978571 0.05865685347239173 988.821014110584 913181.1421651624 0.00830400352788469 0.014380429316505848 5.829461585401252e-08 7.234371555238805 -0.05644112882039276 SQSVT(ph)R ddPTM_A549_PD325901_60min_R1 1 SQSVTR 6 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.002)QS(0.456)VT(0.542)R 75.243 0.04865 90096000.0 2561.9 2756.8 2496.9 2436.1 2430.0 1878.3 1671.5 2227.0 2278.2 3225.8 3349.3 True False 2821.9822020289002 2989.1252109904426 2666.354649079447 2586.572364215479 2259.3251830449035 1863.0037475483796 1735.1098471798955 2182.5807379522967 2182.4551766539093 3022.122437481528 2937.357332962003 0.9607214520213788 1.0176239633658182 0.9077392863164934 0.8805780404004181 0.7691693338401636 0.6342448454065833 0.5907043816934003 0.7430422963730474 0.7429995500251726 1.0288576073357913 1.0 11.520303066543441 -6.169957590450085 2.105636829168786 0.8192300421729488 0.9866654740061663 0.24851997978178175 0.12853142785812963 0.4706755150009191 3.9905800870657355 0.021892990676303098 0.07570520880573957 6.761489991981393e-07 6.169957590450085 0.16743543183321752 SQT(ph)DDEEMTGE ddPTM_A549_MK2206_60min_R1 1 SQTDDEEMTGE 11 0 M0QY77;Q9BQD3 M0QY77 KXD1 KxDL motif-containing protein 1 1 S(0.184)QT(0.816)DDEEMTGE 81.565 0.00036562 1250200.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SQT(ph)DDEEMTGE ddPTM_A549_PD325901_60min_R1 2 SQTDDEEMTGE 11 0 M0QY77;Q9BQD3 M0QY77 KXD1 KxDL motif-containing protein 1 1 S(0.174)QT(0.826)DDEEMTGE;S(0.228)QT(0.772)DDEEMTGE 117.95 5.3387e-11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SQT(ph)FSPGAR ddPTM_A549_MK2206_60min_R1 2 SQTFSPGAR 9 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.016)QT(0.943)FS(0.041)PGAR;S(0.004)QT(0.912)FS(0.083)PGAR 154.66 1.6053e-05 103530000.0 9767.4 11968.5 10961.2 11816.099999999999 13920.8 11432.4 9843.9 10676.2 17782.0 17818.4 16065.2 True False 11415.898329997164 12577.64552840325 12515.662982329146 14711.045030444888 11873.068760772254 12642.168979787059 11632.409208494504 12189.584044491245 13754.405392019007 13793.211064583744 12075.767463036118 0.9453559258193063 1.0415607593391791 1.0364279554603504 1.218228578471335 0.9832144248484145 1.046903976785301 0.9632852938002713 1.0094252047999035 1.1390087987468451 1.142222314797359 1.0 13.559827260530296 SQT(ph)FSPGAR ddPTM_A549_PD325901_60min_R1 2 SQTFSPGAR 9 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.164)QT(0.819)FS(0.016)PGAR;S(0.144)QT(0.775)FS(0.081)PGAR 133.85 4.9466000000000004e-05 124739000.0 9465.5 10657.2 11390.1 10402.3 12302.400000000001 11003.3 10752.0 10951.599999999999 12883.8 12338.3 13602.4 True False 10426.43059186719 11555.319645446658 12163.100680235406 11044.826445662611 11438.321864975978 10913.692772932482 11161.173243720154 10733.161746635998 12342.338690621382 11559.257632332554 11929.391032717987 0.8740119728887483 0.9686428765520899 1.0195910794504461 0.9258499797157007 0.9588353532552345 0.9148574929768155 0.9356029333860469 0.8997241952417213 1.0346159880894867 0.9689729845077345 1.0 13.542232778282381 -8.772077355191138 24.96546628610413 1.0163464428294062 0.9404909108946105 0.32204589185474 0.039551830679562375 132.98693525838425 312096.23890558595 0.006494965674244269 0.006948696838845057 1.6901398623415782e-09 8.772077355191138 -0.07585553193479577 SQT(ph)GDVSPK ddPTM_A549_MK2206_60min_R1 1 SQTGDVSPK 9 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5;H0YBM4 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 SQT(0.899)GDVS(0.101)PK 119.94 0.00015481 45942000.0 6501.2 6056.0 6661.5 5416.9 7926.2 6944.7 5676.3 6159.1 10043.0 9174.1 8589.1 True False 7598.443620920365 6364.224532732601 7606.200868224791 6744.04074317388 6760.266479773647 7679.583544481235 6707.610234782689 7032.171286452681 7768.2765353754885 7101.664438310834 6456.189422899403 1.17692389785986 0.9857555464775223 1.1781254188804346 1.0445853275700834 1.0470985339735719 1.1894916709293852 1.0389426014967162 1.0892139040267828 1.2032293395578286 1.0999777071475012 1.0 12.65646719219175 -4.926223669120969 19.72547505292694 1.092847015376866 3.576281945605316 0.11028119898120725 0.07152739520771685 607.0826098742114 175447.84098064882 0.011122382193287214 5352.721772318449 1.1851582141172114e-05 4.926223669120969 2.48343493022845 SQT(ph)LPIIR ddPTM_A549_MK2206_60min_R1 2 SQTLPIIR 8 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 S(0.014)QT(0.986)LPIIR;S(0.008)QT(0.992)LPIIR 168.46 7.52e-06 176795000.0 5969.0 6903.799999999999 5367.8 6069.200000000001 8567.9 6357.5 6728.5 6568.2 10406.099999999999 9945.8 8638.6 True False 6976.421271961127 7255.173931486014 6129.034755003686 7556.154272456741 7307.573259828498 7030.246430233045 7950.981354885282 7499.262464268879 8049.1349651270375 7699.0368723419115 6493.397206768902 1.074386957983828 1.1173155900463034 0.9438872380415302 1.1636673426630963 1.1253852224242304 1.0826761718664795 1.2244717367046256 1.154905856744977 1.2395876470850098 1.185671633381093 1.0 12.664757747640055 -6.330289423006444 24.999581853795476 1.1277381374906732 1.0524026876216477 0.23898043149482617 0.0751234210678192 286.58770804117006 104059.86133397617 0.013667737799625384 0.03176096058043529 4.6742353656125076e-07 6.330289423006444 -0.07533544986902552 SQT(ph)LPIIR ddPTM_A549_PD325901_60min_R1 2 SQTLPIIR 8 0 Q96BY6;A0A2R8YD85;Q96BY6-3;H7C0I3 Q96BY6 DOCK10 Dedicator of cytokinesis protein 10 1 S(0.009)QT(0.991)LPIIR;S(0.01)QT(0.99)LPIIR 121.36 0.0012527 276740000.0 8401.2 8472.0 9369.2 9297.0 10430.6 9890.7 10022.0 10571.3 10549.5 10464.1 9946.6 True False 9254.083639363445 9185.965172486587 10005.050253576486 9871.254574981045 9697.990639616526 9810.153418451138 10403.392694248823 10360.447128475578 10106.14120187446 9803.394940185526 8723.231256692405 1.060855016570124 1.0530461594078657 1.1469431405823018 1.131605283008849 1.1117429257852465 1.1246008651811052 1.1926076918191766 1.1876845659143924 1.1585318449652582 1.123826097429714 1.0 13.090646921327506 -10.760088287369486 1.0386398558463765 1.0008950600244972 1.1317862201184299 0.03844692653207382 0.05500295636564644 0.3294033179577384 0.6377759093008691 0.030921862860556922 0.008093465712938149 1.7374475885485413e-11 10.760088287369486 0.13089116009393265 SQT(ph)PERPAK ddPTM_A549_MK2206_60min_R1 2 SQTPERPAK 9 1 A8CG34;A8CG34-2;A6NF01;C9JFL1;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 S(0.031)QT(0.969)PERPAK;S(0.062)QT(0.938)PERPAK 53.034 0.0089902 72152000.0 8139.1 9920.5 9279.5 9102.099999999999 15506.6 12422.1 12216.599999999999 12935.599999999999 18080.3 15433.8 17335.8 True False 9512.781098110037 10425.411076118518 10595.472634795758 11332.114908608792 13225.599681468806 13736.598376877371 14436.198085768228 14769.26091361356 13985.140918306219 11947.293860760368 13030.842416260082 0.7300204234102199 0.8000565691063483 0.8131072647747292 0.8696379364137201 1.0149458691147781 1.054160424788549 1.1078484126056596 1.133407990199026 1.0732338302898474 0.9168473901466535 1.0 13.669642733637772 -6.613568967930495 1.7210566659818414 1.0515392427830037 0.7747405925846937 0.8156517505551946 0.05614815075759422 0.09659182748812004 0.5713868408353514 0.007362165605348236 0.019756964979750328 2.4346191407061305e-07 6.613568967930495 -0.27679865019830996 SQT(ph)PERPAK ddPTM_A549_PD325901_60min_R1 1 SQTPERPAK 9 1 A8CG34;A8CG34-2;A6NF01;C9JFL1;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 S(0.065)QT(0.935)PERPAK 52.79 0.009192200000000001 36587000.0 11462.0 10779.0 11748.0 11134.0 14345.0 11766.0 11334.0 12503.0 12313.0 13387.0 14536.0 True False 12625.613802121574 11687.384158903793 12545.289926462941 11821.721892851347 13337.456687563432 11670.181597004872 11765.32157220277 12253.617856586245 11795.527429610906 12541.742535360287 12748.164151296005 0.9903868237245774 0.9167895879122038 0.9840860046650373 0.9273273980904557 1.0462256784015067 0.9154401730713875 0.9229032064986928 0.9612064695088286 0.925272634523752 0.9838077378447678 1.0 13.63800188071039 -11.025850993277901 1.3294951168646598 0.9998808406793797 0.9509622064082761 0.11437055589418554 0.038690058959087226 0.5880659047769391 1.8592094001348218 0.025580685744339058 0.00582499758115444 9.422128149073368e-12 11.025850993277901 -0.048918634271103545 SQT(ph)PERPAKK ddPTM_A549_PD325901_60min_R1 1 SQTPERPAKK 10 2 A8CG34;A8CG34-2;A6NF01;C9JFL1;Q96HA1;Q96HA1-2;Q96HA1-3 A8CG34;Q96HA1 POM121C;POM121B;POM121 Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121 1 S(0.098)QT(0.902)PERPAKK 50.675 0.049929 47982000.0 1530.7 1445.5 1325.2 1697.3 1927.1 1667.8 1413.0 1666.3 1678.2 1592.2 1908.9 True False 1686.095537158218 1567.3173579826916 1415.1360410749658 1802.1383661520185 1791.7471441340865 1654.2179897573271 1466.7724882232692 1633.0643393129374 1607.6710900977048 1491.6682202734487 1674.1174015140994 1.0071548958473793 0.9362051649216381 0.8453027486573483 1.076470720943546 1.0702637356935665 0.9881134908825541 0.8761467307470169 0.9754777877799771 0.9603096465299868 0.8910176902314971 1.0 10.70918498856178 -6.23559343497641 0.003134428144952307 1.9339670138420755 0.00015696315502556276 0.0 0.07301181984009102 188451.3297508265 120.31645047917269 36481.74107175293 37754.890276047576 5.81308355021516e-07 6.23559343497641 -1.93381005068705 SQT(ph)PPGVATPPIPK ddPTM_A549_MK2206_60min_R1 4 SQTPPGVATPPIPK 14 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.029)QT(0.971)PPGVATPPIPK;S(0.132)QT(0.864)PPGVAT(0.004)PPIPK;S(0.015)QT(0.985)PPGVATPPIPK;S(0.004)QT(0.996)PPGVATPPIPK 162.76 2.5908e-19 113300000.0 20322.7 21142.0 18740.9 17997.2 26156.000000000004 20647.0 20074.600000000002 20137.2 29584.5 30464.6 31857.2 True False 23752.674917688786 22218.037495216744 21398.64142480131 22406.514807924996 22308.487048643685 22831.85183563063 23721.894970168716 22991.709767588593 22883.65798673862 23582.625701416404 23946.178026008653 0.9919192487373268 0.9278323025530453 0.8936140624010902 0.9357031749947159 0.9316095046321704 0.9534653843645646 0.9906338683527561 0.9601411023761962 0.955628825689177 0.9848179394558336 1.0 14.547507789877008 -7.521494854983239 3.687836010499347 0.9775642062904266 0.9335813375779562 0.39980840929240635 0.024458897663102757 0.19118961142431978 5.671372810321948 0.0041455710802534036 0.006502703883137124 3.009574822610078e-08 7.521494854983239 -0.04398286871247037 SQT(ph)PPGVATPPIPK ddPTM_A549_PD325901_60min_R1 2 SQTPPGVATPPIPK 14 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.005)QT(0.995)PPGVATPPIPK;S(0.008)QT(0.992)PPGVATPPIPK 151.55 1.3231e-13 195732000.0 16807.7 19006.8 17613.5 17084.3 20161.4 19913.5 18969.0 20634.8 19350.6 20357.6 22080.0 True False 18514.00533082522 20608.56974037039 18808.858028579758 18139.558409739566 18745.332817054117 19751.33105829989 19690.87567523508 20223.222726312564 18537.36157552415 19072.217661750252 19364.29997665216 0.9560895747921612 1.0642558607963346 0.9713161875852931 0.9367526030690867 0.96803565528605 1.0199868356777357 1.0168648336875938 1.0443559927648312 0.9572957244968803 0.9849164537187465 1.0 14.241111728141806 SQT(ph)PPRR ddPTM_A549_MK2206_60min_R1 2 SQTPPRR 7 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.127)QT(0.873)PPRR;S(0.02)QT(0.98)PPRR 51.066 0.031283 262080000.0 2629.0 2940.0 2357.3 1581.8600000000001 3298.5 2695.12 1854.08 2414.61 3232.2 4043.5 4047.6 True False 3072.7109271210934 3089.6334422446894 2691.6005864544472 1969.4157710123934 2813.2950194965297 2980.3158095241333 2190.942336399748 2756.888361932995 2500.1118607627855 3130.0705416672877 3042.469211922975 1.0099398590722317 1.0155019581256188 0.884676359552456 0.6473083649604577 0.9246749345799963 0.9795713947883936 0.7201198052600755 0.9061351717641605 0.8217377684432193 1.0287928401710744 1.0 11.571026948412666 -10.936837928046785 1.1867341611674673 1.0002183703898795 0.8718444551577552 0.1777268197629963 0.10985042880092581 0.748055992943751 1.8668199720717786 0.0783691305013013 0.018254272087856294 1.1565437658328583e-11 10.936837928046785 -0.12837391523212427 SQT(ph)PPRR ddPTM_A549_PD325901_60min_R1 1 SQTPPRR 7 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.036)QT(0.964)PPRR 53.775 0.027218 90730000.0 1939.8 2038.1 2191.8 2030.0 2197.2 2079.6 2009.1 2000.3 2132.2 2404.8 1982.8 True False 2136.727067994716 2209.857839712571 2340.5487283641023 2155.388489535497 2042.8762519285024 2062.664427089181 2085.557399921705 1960.4024472950077 2042.5910489252324 2252.9605175942647 1738.9281700047952 1.2287609717593015 1.270816056597943 1.345972058384475 1.2394925372504335 1.1747904756312442 1.1861699998128694 1.1993349903095503 1.1273625219893941 1.174626464829539 1.2956029791547123 1.0 10.763982625059239 -14.999999999992392 0.09615457482285338 0.25469442542535314 1.3901937947955254 0.0 0.0959741515736646 32.07033179036253 0.2230729585892153 4.810850715617179 0.3236415702754348 1.0000000000175183e-15 14.999999999992392 1.1354993693701723 SQT(ph)PQDTNR ddPTM_A549_PD325901_60min_R1 2 SQTPQDTNR 9 0 F6RP06;A0A0J9YW18;Q12983 F6RP06 BNIP3 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 1 S(0.02)QT(0.792)PQDT(0.188)NR;S(0.012)QT(0.988)PQDTNR 107.79 0.0004993 26910000.0 757.99 650.9 609.7 753.3399999999999 913.06 700.51 438.68 522.6 829.0600000000001 928.6899999999999 684.97 True False 834.9405867972548 705.7536273337487 651.0779084239409 799.8721008407251 848.9298154859997 694.8052788133504 455.374207454907 512.1763330282313 794.2174913338113 870.0523549087729 600.7230323825829 1.389892748885822 1.1748402995879719 1.08382378122184 1.331515619882725 1.4131800675578912 1.1566150145061347 0.758043529059982 0.8525997929475778 1.3221026138847918 1.4483419279896397 1.0 9.23055616921612 -7.512568448976978 24.95923074794032 1.0955877341426175 1.2669866281586573 0.18542949259454533 0.20012331613433298 778.5830606389752 1884799.4392957578 0.030834911885097245 0.047395530160207124 3.072073138908864e-08 7.512568448976978 0.1713988940160398 SQTELRKT(ph)PVSEAR ddPTM_A549_MK2206_60min_R1 1 SQTELRKTPVSEAR 14 2 E9PD50;Q92540-2;Q92540;Q92540-5;Q92540-4;B1ALB4 E9PD50 SMG7 Protein SMG7 1 S(0.036)QT(0.032)ELRKT(0.733)PVS(0.2)EAR 44.342 0.020363 10897000.0 1839.2 1796.7 1640.2 1953.5 2280.5 1660.4 1646.4 1783.7 2487.1 2649.4 2970.3 True False 2149.6119958771837 1888.1443556738209 1872.8050235025587 2432.107587695947 1945.0414709600836 1836.102425915682 1945.5295686532106 2036.5449373521526 1923.7758210825825 2050.898699911786 2232.692533890407 0.9627890823514075 0.8456804181558218 0.8388100891972107 1.0893159495893798 0.871164050327566 0.8223713735972067 0.8713826642592732 0.9121475108816383 0.8616393846807265 0.9185764133577989 1.0 11.124568874661238 -10.8749511599708 1.0785772263790006 1.0010676274363097 0.8939062242719931 0.0550977391808104 0.07490518367190306 0.6292599556946985 1.2782509002558107 0.051619937787885734 0.011958649079818915 1.33367140618026e-11 10.8749511599708 -0.10716140316431666 SQTGDVS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SQTGDVSPK 9 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5;H0YBM4 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 S(0.001)QT(0.014)GDVS(0.985)PK 125.54 7.283100000000001e-05 57739000.0 7532.1 8632.2 7806.2 6883.3 10005.0 7600.8 6213.6 6937.4 11015.0 10575.0 10015.0 True False 8803.334337835213 9071.54210889272 8913.236540949685 8569.708809003077 8533.277753543352 8405.1116109973 7342.530689858845 7920.797694896463 8520.120087340538 8186.100155343533 7527.999100061423 1.1694122463116905 1.2050402754190954 1.1840113717437826 1.1383780331393976 1.1335386256188218 1.116513365540748 0.9753628543604549 1.0521783530542446 1.1317907951491413 1.0874204481874528 1.0 12.878050740260816 -7.036172546844463 1.3124592406517137 1.0575408725074926 1.1846935861883445 0.6257124968873549 0.04285424830508538 0.2762913490692704 0.939492174989979 0.008840544423425623 0.020382834546719058 9.200839462850603e-08 7.036172546844463 0.1271527136808519 SQTGDVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SQTGDVSPK 9 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5;H0YBM4 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 SQT(0.012)GDVS(0.988)PK;SQT(0.004)GDVS(0.996)PK 139.32 4.2137e-05 182043000.0 17708.9 18323.9 16623.800000000003 16992.3 20562.2 17213.1 19165.8 19756.8 17800.6 18366.5 20863.3 True False 19506.69449139684 19868.11936073264 17751.99103503019 18041.875778686703 19117.982007739047 17072.922220585107 19895.16500692817 19362.73512509022 17052.50268525395 17206.83605555351 18297.246363355378 1.0661000078385385 1.0858529729655557 0.970200142824923 0.9860432231387497 1.044855691839368 0.933086972845145 1.0873310995458316 1.0582321919143385 0.9319709833172315 0.9404057700187239 1.0 14.159338926591643 -8.758825350114842 24.999938245835803 0.9678751868480122 1.0267492329743888 0.28755880317724236 0.0492987270975638 78.42834086971325 750067.1433777225 0.0087888327242477 0.009747176733320205 1.7425074753080688e-09 8.758825350114842 0.05887404612637659 SQTS(ph)PKGGR ddPTM_A549_PD325901_60min_R1 1 SQTSPKGGR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.013)QT(0.065)S(0.922)PKGGR 72.887 0.00068236 14275000.0 3489.0 3334.3 3228.2 3710.5 3407.0 4658.0 3048.2 4165.1 3621.2 4579.1 5834.7 True False 3843.2007115339516 3615.2931627268676 3447.285064743589 3939.6891578430864 3167.704073511927 4620.066792354979 3164.2009190390427 4082.023813042262 3469.0135570622133 4289.974844525905 5117.068889210701 0.751055104932691 0.7065164141818931 0.6736835362940221 0.7699112994452526 0.6190465952473312 0.9028736748290321 0.618361993466755 0.7977269607702911 0.6779298133696423 0.8383656615550521 1.0 12.321101940611888 -10.805909976989977 0.8116542947693104 1.0200038187364637 0.7209947434452044 0.360028875986397 0.09112566557336343 0.34608874104479537 0.3589593964312283 0.06810778627452009 0.013052816045242577 1.563471694286356e-11 10.805909976989977 -0.2990090752912593 SQTTTERDS(ph)DT(ph)DVEEEELPVENR ddPTM_A549_PD325901_60min_R1 2 SQTTTERDSDTDVEEEELPVENR 23 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 2 SQT(0.004)T(0.003)T(0.003)ERDS(0.99)DT(1)DVEEEELPVENR;SQT(0.001)T(0.001)T(0.001)ERDS(0.997)DT(1)DVEEEELPVENR 131.5 2.6588e-22 9566600.0 913.01 560.4 674.8399999999999 466.49 737.5699999999999 1150.3600000000001 557.24 1008.8 929.36 623.74 821.29 True False 1005.6981030775626 607.626874723971 720.6387005425823 495.3040278243419 685.7656276783654 1140.991849560642 578.4460731334284 988.6786926117098 890.302231136457 584.3569499518657 720.276536586261 1.3962666448140215 0.8436022053471417 1.0005028123754214 0.6876581460945921 0.9520865845894974 1.5841024823165204 0.803088874552216 1.372637650113575 1.2360561338788432 0.8112952737866708 1.0 9.492407098226382 SQTTTERDS(ph)DTDVEEEELPVENR ddPTM_A549_MK2206_60min_R1 2 SQTTTERDSDTDVEEEELPVENR 23 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.001)QT(0.005)T(0.004)T(0.003)ERDS(0.959)DT(0.027)DVEEEELPVENR;SQTTT(0.003)ERDS(0.994)DT(0.003)DVEEEELPVENR 169.7 7.084e-41 7056200.0 542.8 825.54 642.01 923.98 969.9000000000001 791.4000000000001 894.25 711.73 883.47 845.98 1133.78 True False 634.4113698141227 867.5564598335644 733.0566718320191 1150.355141479038 827.2289948187612 875.1454227111963 1056.723649640509 812.6199070817104 683.3654556116874 654.8725304413732 852.2311352638674 0.7444123355311311 1.0179825917354592 0.8601618052889496 1.3498159054267191 0.9706627235141262 1.0268874094118072 1.2399495933850466 0.9535205573428239 0.8018545994568763 0.768421269000706 1.0 9.735100949423035 -8.513325605191278 24.82782188178537 0.9049185052891812 1.037449915267262 0.15818840051969985 0.16490381647993127 682.3893024305161 1773476.0137416048 0.02694779050430836 0.03143246784253436 3.066721901638257e-09 8.513325605191278 0.13253140997808088 SQTTTERDS(ph)DTDVEEEELPVENR ddPTM_A549_PD325901_60min_R1 2 SQTTTERDSDTDVEEEELPVENR 23 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 SQT(0.001)T(0.001)T(0.004)ERDS(0.968)DT(0.027)DVEEEELPVENR;SQTTTERDS(0.999)DTDVEEEELPVENR 171.22 6.1261e-41 9166700.0 1219.08 826.6700000000001 593.2 740.03 1103.0500000000002 990.4100000000001 664.26 708.12 612.76 802.79 854.78 True False 1342.8401041607365 896.3363820986177 633.4581192013808 785.7399723699283 1025.5755733159178 982.3444293293895 689.5387777970195 693.9959910906063 587.0078281302999 752.1017023950013 749.6474788968624 1.7912954314697114 1.1956771780485598 0.8450080031397437 1.0481459545841167 1.368077132501126 1.3104085013064413 0.919817377111312 0.9257631228372173 0.7830451574306719 1.003273836792929 1.0 9.550068518705467 -7.77411378149749 20.673350365966833 0.8990295477919843 1.2333065000799943 0.34614706780848836 0.22514575866470476 25.341097223193422 41334.112319287466 0.035989461218370815 0.05001110816379007 1.6822332723786034e-08 7.77411378149749 0.33427695228801 SQTTTERDSDT(ph)DVEEEELPVENR ddPTM_A549_PD325901_60min_R1 2 SQTTTERDSDTDVEEEELPVENR 23 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.005)QT(0.005)T(0.005)T(0.005)ERDS(0.144)DT(0.837)DVEEEELPVENR;S(0.025)QT(0.025)T(0.025)T(0.025)ERDS(0.112)DT(0.789)DVEEEELPVENR 53.55 0.0026913 12021100.0 143.03 0.0 0.0 180.92 369.75 166.85 0.0 162.57 0.0 268.98 123.17 True False 157.55030030687914 0.0 0.0 192.095017500868 343.7800355682522 165.4912289189412 0.0 159.32741381630217 0.0 251.99655689558605 108.02087083896042 1.458517220637465 0.0 0.0 1.7783139129404626 3.1825334576386264 1.5320301311554754 0.0 1.4749687961119156 0.0 2.332850632830644 1.0 6.755166273893664 -7.744059935457288 24.97959341225765 0.5659062066199326 1.3097742231169158 0.0 1.0447584151263472 418.7924518674289 601931.8977533526 0.15076292937162686 0.22332521794344726 1.8027689298780176e-08 7.744059935457288 0.7438680164969832 SQVEDPLPPVFS(ph)GTPK ddPTM_A549_MK2206_60min_R1 3 SQVEDPLPPVFSGTPK 16 0 Q13164-2;Q13164 Q13164-2 MAPK7 Mitogen-activated protein kinase 7 1 SQVEDPLPPVFS(0.896)GT(0.104)PK;SQVEDPLPPVFS(0.668)GT(0.332)PK;SQVEDPLPPVFS(0.978)GT(0.022)PK 130.06 4.7743e-10 5731700.0 2650.94 3085.9 2935.2700000000004 2615.9700000000003 3371.0 3363.3 2688.65 2563.76 3947.1 3762.7999999999997 4407.6 True False 3098.353862739594 3242.959129055402 3351.5354233242024 3256.882767435357 2875.130365536697 3719.2021736221486 3177.142902550692 2927.1808311857108 3053.0881522234963 2912.7808666219044 3313.0712764284294 0.9351908257403065 0.978837718381776 1.0116098156925974 0.9830403561212709 0.8678142199935271 1.1225844128628402 0.9589720949124065 0.8835248586445391 0.9215280618758069 0.8791784491162388 1.0 11.693953526126197 -7.970738458833848 24.999330793146765 0.954299357899769 0.9841703975526634 0.08869172054709251 0.0672130408702814 594.174180709677 507626.1940458076 0.010164012448503183 0.014043535710682337 1.0696988801929124e-08 7.970738458833848 0.029871039652894393 SQVEDPLPPVFS(ph)GTPK ddPTM_A549_PD325901_60min_R1 2 SQVEDPLPPVFSGTPK 16 0 Q13164-2;Q13164 Q13164-2 MAPK7 Mitogen-activated protein kinase 7 1 SQVEDPLPPVFS(0.894)GT(0.106)PK;SQVEDPLPPVFS(0.901)GT(0.099)PK 121.31 8.7303e-08 5186200.0 2719.0 2059.0 2244.1 3043.4 3309.5 2958.0 2447.2 2797.5 2744.7 2852.6000000000004 3622.3 True False 2995.030878377993 2232.5191560611283 2396.398120869551 3231.383905937109 3077.0521371551863 2933.9110287217745 2540.329535159222 2741.701667903706 2629.349803951357 2672.48634917224 3176.7800636515894 0.9427882378912052 0.702761636414619 0.7543481364318879 1.0171884238730566 0.9686072298055882 0.9235486782013338 0.7996554637903414 0.8630442186646761 0.8276776330965191 0.8412563336538688 1.0 11.633349496821557 -10.838396445651425 1.0324071552750715 1.0017004388501847 0.8632343392531024 0.0 0.10046898971571264 0.6710198799421838 1.2441230899345654 0.06883591101194085 0.01608039975740422 1.4507866625540854e-11 10.838396445651425 -0.13846609959708223 SQVEEELFSVR ddPTM_A549_MK2206_60min_R1 1 SQVEEELFSVR 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 61.343999999999994 0.021712000000000002 1046900.0 1175.5 1411.3 1181.2 1478.3 1932.9 1442.4 1470.1 1570.6 1802.8 2131.0 2213.2 False True 1373.8956617842705 1483.1291418503167 1348.7119215712855 1840.4835663634092 1648.572970497148 1595.0338106123695 1737.1981407173755 1793.2373597607716 1394.468678480028 1649.605619956223 1663.601358787411 0.8258562993635054 0.8915171498365213 0.8107182134993888 1.1063248756330222 0.9909663524792879 0.9587836666441412 1.0442394336487009 1.0779249189047617 0.8382228537589365 0.9915870837942875 1.0 10.700094053116207 -6.171860391032764 24.999984074450705 0.9588440299634347 0.8475788230026104 0.382022326246378 0.07706669684121933 80.59343040463988 22489.701560742753 0.012863313803102846 0.03403313999749687 6.731930271633448e-07 6.171860391032764 -0.1112652069608242 SQVEEELFSVR ddPTM_A549_PD325901_60min_R1 2 SQVEEELFSVR 11 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 ; 111.52 0.00017617 3446400.0 2156.8999999999996 1778.1399999999999 2049.2 1839.4 2181.0 2156.2 1853.6100000000001 2146.2 1950.19 2202.2 2326.3 False True 2375.8669001741423 1927.9900981828735 2188.2710348406413 1953.0155604195056 2027.8140840415356 2138.640622085832 1924.150142884313 2103.392357338671 1868.2302962684075 2063.1527161701956 2040.1798476307013 1.1645379709701968 0.9450098727432702 1.0725873198786475 0.9572761747880114 0.9939388855332895 1.0482608308132615 0.9431277076473745 1.030983792816785 0.9157184345478258 1.0112602173608238 1.0 10.994480620117825 -3.0613422988266317 1.5609889948441242 0.9753350905351746 199.75883719395796 0.4528129318583999 0.050050995419346316 860.0648617168697 2.511345036419413 0.007305453959525839 611796.527475693 0.0008682758086891772 3.0613422988266317 198.7835021034228 SQVFSTAADGQTQVEIK ddPTM_A549_MK2206_60min_R1 1 SQVFSTAADGQTQVEIK 17 0 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 116.84 3.783e-09 1812200.0 582.95 919.99 921.24 903.3 1256.9 647.91 490.26 720.37 1004.4 1114.2 1266.8 False True 681.3377082408674 966.8135614049969 1051.8856845820617 1124.6085405506778 1072.0116750053626 716.4714061521498 579.3338959717705 822.4846535406003 776.9050036972155 862.5014461544924 952.2185980986329 0.7155265708959541 1.0153273243512644 1.1046682838189064 1.1810403018763433 1.1258041768412521 0.7524232435522501 0.6084043066671565 0.8637561324499624 0.815889340166765 0.9057809287454734 1.0 9.895148996701574 -7.2543985269369795 24.957636903681607 0.8714983250089889 1.0404519915432253 0.2918242205972751 0.14820723058836874 704.5083881932721 2497262.0721296645 0.02435871506519359 0.041636553037633695 5.566746863064238e-08 7.2543985269369795 0.16895366653423638 SQVIAEKAPEPDLMS(ph)PTR ddPTM_A549_MK2206_60min_R1 3 SQVIAEKAPEPDLMSPTR 18 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 SQVIAEKAPEPDLMS(0.926)PT(0.074)R;SQVIAEKAPEPDLMS(0.971)PT(0.029)R;SQVIAEKAPEPDLMS(0.997)PT(0.003)R 143.05 3.0806e-17 17941700.0 8139.0 10092.3 8244.7 8800.5 10088.3 7061.0 6040.2 5861.7 11432.5 12542.0 14602.9 True False 9512.664220554803 10605.954962301386 9413.92243462478 10956.622895069455 8604.324433890197 7808.19033328754 7137.626154384797 6692.6139257033765 8843.057003951033 9708.7534892027 10976.596910462998 0.86663146129446 0.9662334372679466 0.8576357965419443 0.9981803089284891 0.7838790568767695 0.7113489177911505 0.6502585648910131 0.6097166526470433 0.8056282904514555 0.8844957657093359 1.0 13.422143222472862 -2.7960593724779677 11.757188212690217 0.8589737434247331 0.9660156772579119 0.0 0.1305416968251839 0.0 0.0 0.020004892633252138 0.0 0.0015993393676912617 2.7960593724779677 0.10704193383317884 SQVIAEKAPEPDLMS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 SQVIAEKAPEPDLMSPTR 18 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 SQVIAEKAPEPDLMS(0.894)PT(0.106)R;SQVIAEKAPEPDLMS(0.841)PT(0.159)R;SQVIAEKAPEPDLMS(0.992)PT(0.008)R;SQVIAEKAPEPDLMS(0.964)PT(0.036)R 123.53 4.6975000000000005e-11 38234700.0 12759.7 14807.3 14138.600000000002 17049.4 16752.800000000003 18364.6 16279.0 18949.6 20464.0 22004.899999999998 24353.899999999998 True False 14055.055350805318 16055.163137223868 15098.130418308569 18102.5027160032 15576.141122022487 18215.044786363716 16898.50625321061 18571.63536232637 19603.96924547695 20615.506858620265 21358.524692091887 0.6580536602328756 0.7516981331191092 0.7068901357170393 0.8475539849765819 0.7292704597611857 0.8528231724313776 0.7911832159206846 0.8695186409201111 0.9178522172336852 0.965212118150336 1.0 14.38252437803045 -7.392160308812747 0.20046395783013654 1.0513150913825493 0.5751737715728883 0.8338724125684087 0.04250935333129767 1.1072214497632122 0.10294232260715161 0.06287748934802981 0.15723471570581715 4.05358879861467e-08 7.392160308812747 -0.476141319809661 SQVS(ph)TPR ddPTM_A549_PD325901_60min_R1 1 SQVSTPR 7 0 O95997;E5RJR4 O95997 PTTG1 Securin 1 S(0.01)QVS(0.495)T(0.495)PR 50.04 0.05315399999999999 8902000.0 665.43 799.37 795.52 764.01 855.0 666.88 590.67 903.45 630.27 755.43 933.77 True False 732.983963736325 866.7357152892587 849.5087710503749 811.201162507397 794.9477495898735 661.4491503833596 613.1482700770263 885.4299810071861 603.781943722965 707.7320208775101 818.9222096557281 0.8950593293158684 1.0583858943740592 1.0373497763694859 0.990571696484362 0.970724374326185 0.8077069379537652 0.7487259019813268 1.0812137838823759 0.7372885197200754 0.8642237474241149 1.0 9.677582604920543 -7.083923276059303 5.713790683241913 0.8753950945792146 1.0004685292473467 0.24939752004959748 0.1016632356375191 0.2907409019297583 15.439535068323337 0.01755833057982 0.030829862398734517 8.242837229176364e-08 7.083923276059303 0.12507343466813214 SQVST(ph)PR ddPTM_A549_PD325901_60min_R1 1 SQVSTPR 7 0 O95997;E5RJR4 O95997 PTTG1 Securin 1 S(0.005)QVS(0.152)T(0.843)PR 50.04 0.056329 12437000.0 708.17 908.68 737.82 515.21 818.59 674.58 485.2 562.79 910.59 893.45 938.69 True False 780.0628970728004 985.2576526127372 787.8929020720877 547.0333515731938 761.0950623821922 669.0864441362863 503.66455151162756 551.5647119497858 872.3210689620238 837.037414522869 823.2370808461781 0.9475555890546131 1.1968091276938395 0.9570668285036903 0.6644906604679619 0.9245150395799565 0.8127506154710069 0.6118098458270702 0.6699949805259631 1.0596231501931301 1.0167634986297094 1.0 9.685164156394439 -8.804036882851712 24.998719792215052 1.0281554542479556 0.8507470417649047 0.2002733703854973 0.1577359142320077 173.95658467284449 102087.18363402135 0.029597381217139913 0.03150892287708316 1.5702294455148302e-09 8.804036882851712 -0.17740841248305095 SQVVAGTNYFIK ddPTM_A549_PD325901_60min_R1 1 SQVVAGTNYFIK 12 0 P04080;A0A1W2PS52 P04080 CSTB Cystatin-B 0 117.98 5.7168e-05 1440300.0 3627.3 3408.1 3734.5 3808.8 4563.6 4654.6 4067.9 4471.7 4318.2 4396.0 4438.4 False True 3995.540825722874 3695.3125477279923 3987.945627372817 4044.0609255875897 4243.068479565314 4616.694480827715 4222.706160540294 4382.508435519215 4136.7210709450055 4118.435809773948 3892.504937335732 1.0264703295296695 0.9493404908195928 1.0245190928652772 1.0389353361631424 1.090061168289623 1.1860471740307317 1.0848300075453654 1.1258838475665163 1.0627400960411961 1.0580425397206707 1.0 11.926483153912516 -6.116238664921408 2.8414437835944835 1.0572096228777068 0.9879340482011402 0.2587727154891668 0.05218677271764086 0.37934330968100005 5.855936206149437 0.008926110693799713 0.02829795941773284 7.651759917204415e-07 6.116238664921408 -0.06927557467656664 SRADLES(ph)PQR ddPTM_A549_MK2206_60min_R1 2 SRADLESPQR 10 1 A0A087X1K6;Q9Y2Y9 A0A087X1K6 KLF13 Krueppel-like factor 13 1 SRADLES(1)PQR;S(0.004)RADLES(0.996)PQR 69.45100000000001 0.0029889 4417400.0 993.69 1355.12 1320.24 1019.41 1416.38 916.29 898.04 839.72 1592.31 1616.02 1646.2600000000002 True False 1161.4005786120042 1424.0898198144973 1507.4698843000972 1269.165495763054 1208.0323782672406 1013.2511996159241 1061.2022435819547 958.7528815346471 1231.6543273965688 1250.959959625366 1237.4482075354088 0.9385447985133322 1.1508278173927113 1.2182084673284896 1.0256312046310332 0.9762286380237644 0.818823117966277 0.8575730581044049 0.7747822298309912 0.9953178806971005 1.010919044536715 1.0 10.273152428201413 -6.565362823073845 3.875452487351121 0.9551478134618874 1.1097181252767525 0.36275357862833857 0.10051377661196095 0.22076509908658004 7.039354242604689 0.015723818383495534 0.03503811465353628 2.720427628881341e-07 6.565362823073845 0.15457031181486514 SRADLES(ph)PQRK ddPTM_A549_MK2206_60min_R1 3 SRADLESPQRK 11 2 A0A087X1K6;Q9Y2Y9 A0A087X1K6 KLF13 Krueppel-like factor 13 1 S(0.006)RADLES(0.994)PQRK;S(0.272)RADLES(0.728)PQRK;S(0.001)RADLES(0.999)PQRK 55.724 0.0033891999999999998 19684500.0 3646.21 4003.54 3549.62 3074.12 4134.32 2908.29 2790.3900000000003 2829.55 4554.71 5371.65 6395.37 True False 4261.601106724305 4207.30308549806 4053.0094912359177 3827.2795380024886 3526.167004700588 3216.0433174333402 3297.367743606801 3230.6473776334497 3523.0754573772833 4158.190534227053 4807.22312576733 0.8864995435476208 0.875204452846463 0.8431082529769148 0.7961518402355366 0.7335143205231899 0.6690022978536064 0.6859194294378576 0.6720402388474058 0.7328712159194668 0.8649880451644985 1.0 12.230988051933902 -10.677092566106044 0.9763812988891704 0.9978776241430186 0.7636238077360583 0.33729670793421695 0.08307641535357699 0.348429234987218 0.5990227971869404 0.05532837595055412 0.015170967006008769 2.103330085402522e-11 10.677092566106044 -0.2342538164069603 SRAS(ph)PATHR ddPTM_A549_MK2206_60min_R1 3 SRASPATHR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)RAS(0.984)PAT(0.014)HR;S(0.362)RAS(0.637)PAT(0.001)HR;S(0.325)RAS(0.632)PAT(0.043)HR 73.273 0.00063351 192013000.0 2452.46 2454.89 1249.6 1305.12 2105.3 1348.9499999999998 1836.01 2032.17 2561.0699999999997 3034.1200000000003 3756.58 True False 2866.3752911096963 2579.8334153170276 1426.8120700943768 1624.8744585890624 1795.613158874046 1491.6949936394603 2169.5892513016165 2320.2363207596127 1980.9917341883995 2348.7101847121444 2823.717509666373 1.0151069578657546 0.913630137039395 0.5052956130384859 0.57543803621526 0.6359039644465712 0.5282734510562661 0.7683450075563533 0.8216956238776705 0.7015545030290431 0.8317794455967545 1.0 11.463380050399838 -10.708775094563237 0.6005507281381876 1.041423099260288 0.7026617903127739 0.15738022135618568 0.15812278291655085 1.1117183288699821 0.5757854851809644 0.20507630649473726 0.03410196075994316 1.955351799745238e-11 10.708775094563237 -0.3387613089475141 SRAS(ph)PATHR ddPTM_A549_PD325901_60min_R1 2 SRASPATHR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.072)RAS(0.918)PAT(0.01)HR;S(0.062)RAS(0.937)PAT(0.001)HR 61.235 0.002154 157959000.0 1176.54 1299.62 965.38 999.8199999999999 1235.0700000000002 1043.67 689.67 842.1400000000001 1072.15 1260.81 1564.13 True False 1295.9814746770303 1409.1435384167862 1030.8964921015315 1061.5766106440303 1148.3229439601926 1035.1706975476861 715.9157692519046 825.34285705395 1027.0912640020574 1181.2022414288188 1371.751925836999 0.9447637362610328 1.0272582905666214 0.7515181664297731 0.7738838128448702 0.8371214374344857 0.7546340399092629 0.5218988621540122 0.6016706384795868 0.7487441749902114 0.8610902738176126 1.0 10.421803885907115 -5.757696417320727 24.978119022949 0.811479745418613 0.9860110508473324 0.24764531942019807 0.12866951382201336 136.6136234588336 911629.7158004728 0.022684745949447943 0.08157668637212608 1.7470429528018549e-06 5.757696417320727 0.17453130542871942 SRAS(ph)PATHRR ddPTM_A549_PD325901_60min_R1 1 SRASPATHRR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.076)RAS(0.905)PAT(0.019)HRR 74.53699999999999 0.00033032 100070000.0 953.2 843.33 899.2 890.25 1074.6 1409.4 1030.9 1339.0 957.06 976.89 1526.4 True False 1049.9681622912478 914.4003787668926 960.2251193288622 945.2387205955545 999.1238031687453 1397.9223136850815 1070.1314636301256 1312.2925945748214 916.8380964658019 915.208998682909 1338.6624766468228 0.7843412216358547 0.6830701500331494 0.7173018860841626 0.7061068320696161 0.7463597587880567 1.0442679451109267 0.7994034958764715 0.9803013212575775 0.6848911599900546 0.6836742006658689 1.0 10.386576537594424 -7.027357210431752 24.397973231597305 0.8674058397939082 0.7203311384610068 0.2735102490456133 0.11241046011033914 597.6882052724927 533035.6415719626 0.01851118476646543 0.032122167955524125 9.389506989563937e-08 7.027357210431752 -0.14707470133290135 SRAS(ph)PVSR ddPTM_A549_MK2206_60min_R1 5 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.183)RAS(0.817)PVSR;S(0.068)RAS(0.922)PVS(0.01)R;S(0.243)RAS(0.756)PVSR;S(0.007)RAS(0.988)PVS(0.005)R;S(0.126)RAS(0.874)PVSR 81.92299999999999 0.0015898 806915000.0 8752.5 9404.11 8071.64 6518.13 9181.3 8267.44 7731.25 7964.14 11766.01 12662.499999999998 12661.4 True False 10229.708021919882 9882.73903079854 9216.319924341053 8115.072142609973 7830.742932394563 9142.29501331748 9135.918050079043 9093.081234155832 9101.027521457061 9802.032455511813 9517.224943137058 1.074862481767503 1.038405532058487 0.9683831137128907 0.8526720962355536 0.8227968740027911 0.9606051204989178 0.959935076102937 0.9554340985407643 0.9562690359672417 1.029925478705863 1.0 13.216325254791746 -5.700687376049357 3.509015170316136 0.9551409615878437 1.0660230932343209 0.35942107713354987 0.05708600943034049 0.2165998326892742 5.221364455635202 0.00848040010983864 0.03789926527842472 1.992106827631813e-06 5.700687376049357 0.1108821316464772 SRAS(ph)PVSR ddPTM_A549_PD325901_60min_R1 8 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.095)RAS(0.905)PVSR;S(0.053)RAS(0.946)PVS(0.001)R;S(0.211)RAS(0.789)PVSR;S(0.237)RAS(0.704)PVS(0.059)R;S(0.21)RAS(0.79)PVSR;S(0.166)RAS(0.829)PVS(0.005)R;S(0.079)RAS(0.878)PVS(0.043)R;S(0.182)RAS(0.816)PVS(0.002)R 89.31700000000001 0.0013965 1041844400.0 11195.07 10626.339999999998 11599.230000000001 10381.650000000001 13960.019999999999 11082.31 11528.640000000003 12562.029999999999 10982.94 12312.699999999999 13145.67 True False 12331.585265025053 11521.858964943474 12386.42349963626 11022.90094206217 12979.516354654521 10992.05934168817 11967.368703913871 12311.470456928111 10521.365226002663 11535.274020701474 11528.83592726798 1.0696296957317617 0.9993948250830768 1.0743863107930882 0.9561156921307923 1.1258306074037703 0.9534405217520505 1.0380379059440574 1.0678849568679387 0.9126129725827349 1.0005584339541398 1.0 13.492959230202628 -8.755988974948746 24.999879309164026 0.9587339033770915 1.0333789134535727 0.21244505938555147 0.05380893840969561 122.59401281333294 562312.6290935777 0.008928148131369164 0.009981767646899673 1.7539250266254616e-09 8.755988974948746 0.07464501007648117 SRDAT(ph)PPVS(ph)PINMEDQER ddPTM_A549_MK2206_60min_R1 1 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 2 S(0.174)RDAT(0.826)PPVS(1)PINMEDQER 52.321000000000005 0.007217 10498000.0 488.74 430.36 228.29 389.18 575.57 374.19 358.56 415.13 537.96 631.06 632.8 True False 571.2273634542272 452.26348578381754 260.6649547710032 484.52911747095396 490.9044154529687 413.7865374327807 423.7057107241833 473.9759487823057 416.11291894559355 488.5031077097954 475.65829560847396 1.2009195860307638 0.9508159322760698 0.5480088483215751 1.0186495682812222 1.0320526730748836 0.8699239375263174 0.8907775069541641 0.9964631189202405 0.8748148046346832 1.0270042848404233 1.0 8.893781729146175 -11.047248043872498 1.3337629090284882 1.000216311217208 0.9192294097625667 0.03470104427247045 0.15163429583817137 1.4674407672861265 4.633933927528923 0.10709141516462128 0.023623087056210326 8.969163814578817e-12 11.047248043872498 -0.08098690145464127 SRDAT(ph)PPVS(ph)PINMEDQER ddPTM_A549_PD325901_60min_R1 2 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 2 S(0.046)RDAT(0.954)PPVS(1)PINMEDQER;S(0.114)RDAT(0.887)PPVS(0.999)PINMEDQER 52.321000000000005 0.007217 25927000.0 1232.69 1291.12 1161.3899999999999 1043.54 1507.35 1162.54 1147.52 1186.43 1709.1 1417.52 1405.52 True False 1357.8317813415852 1399.9272135860344 1240.208909405413 1107.997095748706 1401.478936075199 1153.0726596789086 1191.1895015470382 1162.7657229136707 1637.2724705553492 1328.0175452845242 1232.6499503253683 1.1015550529841616 1.1357054070512977 1.0061322836041564 0.898874084614404 1.1369642579430332 0.9354421012831302 0.9663647828263114 0.9433056989186175 1.3282541974898692 1.0773679461342474 1.0 10.267547443988974 -8.729531617764778 24.997983223347823 1.1550090872623715 1.0150838051211977 0.19463100351876306 0.10634632083775539 246.54921141449006 193157.6449201698 0.023072941627429993 0.026161117267344703 1.8640964622546803e-09 8.729531617764778 -0.13992528214117383 SRDAT(ph)PPVSPINMEDQER ddPTM_A549_MK2206_60min_R1 2 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 1 S(0.262)RDAT(0.737)PPVSPINMEDQER;S(0.278)RDAT(0.722)PPVSPINMEDQER 83.31 6.153e-05 10708300.0 2143.9700000000003 2245.5 1883.17 1684.74 2940.1 2549.9 2167.9 2755.2 2861.7 2567.0 2772.2 True False 2505.8197209660752 2359.7863586940293 2150.2318230150677 2097.5013756308526 2507.615184726919 2819.7287255133697 2561.779368247872 3145.758037446123 2213.529519195861 1987.1129171410714 2083.7862311722665 1.2025320464644722 1.1324512675018947 1.0318869521493197 1.006581838507912 1.2033936817579511 1.353175620095679 1.2293868391704954 1.5096356768210468 1.0622632427850363 0.9536068947068481 1.0 11.02499156849436 -8.975572103443133 24.999229835451427 1.027468881733161 1.204247085582262 0.31394660959226883 0.1335603079692705 175.56279198073136 179670.83373264014 0.024724532508536515 0.0256004223518764 1.0578592710569122e-09 8.975572103443133 0.17677820384910103 SRDAT(ph)PPVSPINMEDQER ddPTM_A549_PD325901_60min_R1 1 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 1 S(0.223)RDAT(0.773)PPVS(0.004)PINMEDQER 53.998000000000005 0.0034771 3151700.0 381.24 555.0 471.74 555.84 574.18 275.13 415.31 647.55 574.11 455.72 467.17 True False 419.9432041459454 601.7717977726696 503.75511320306657 590.1729743957691 533.8515776134659 272.8894324990606 431.114849316352 634.6341072568525 549.9821532213047 426.9457614263381 409.71105163462823 1.0249740700683905 1.4687712117400171 1.2295375269796356 1.4404614472593553 1.302995307262406 0.6660533842333785 1.0522412016867224 1.5489797132023815 1.3423659211218135 1.0420655233070926 1.0 8.67846299868625 -10.938471099963715 1.248471812409356 1.0023933932192164 1.2430876242091375 0.10233669446427285 0.23651786286347293 0.8141078572785768 2.2911954065842215 0.16274230557853242 0.03980777215803445 1.1522027303666485e-11 10.938471099963715 0.24069423098992115 SRDS(ph)DESGDK ddPTM_A549_MK2206_60min_R1 1 SRDSDESGDK 10 1 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 S(0.24)RDS(0.722)DES(0.038)GDK 49.298 0.0082113 6327600.0 1076.0 1021.5 1008.2 753.32 214.15 155.12 318.88 238.47 108.0 1491.0 1511.4 True False 1257.602494325711 1073.4899868207317 1151.1779201897828 937.8834338178203 182.64881868278968 171.53469543967748 376.816368350423 272.273852783746 83.5381724405608 1154.182064455528 1136.077667482059 1.1069687665923342 0.9449089772180425 1.0132915672404608 0.825545172361758 0.16077141898898745 0.1509885286451037 0.3316818727592616 0.2396613018432085 0.07353209629206978 1.0159358796424496 1.0 10.14984575212878 -6.571572275632792 6.351446351851128 0.45588373251755704 0.9998704125499096 0.43631419624151424 0.3035324323743316 0.1846329632231296 17.234154680815806 0.054341071455000195 0.11462429454674931 2.6818082618068747e-07 6.571572275632792 0.5439866800323525 SRDS(ph)DESGDK ddPTM_A549_PD325901_60min_R1 4 SRDSDESGDK 10 1 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 S(0.028)RDS(0.972)DESGDK;S(0.003)RDS(0.997)DESGDK;S(0.036)RDS(0.956)DES(0.008)GDK;S(0.237)RDS(0.763)DESGDK 105.0 9.2229e-05 33246900.0 3710.11 3271.34 3584.7 2961.64 3315.4300000000003 2620.31 2154.1 2866.54 3016.1000000000004 3314.26 3658.27 True False 4086.757635961376 3547.027302568727 3827.979298552239 3144.5737764275414 3082.565634412576 2598.971064121013 2236.075454268748 2809.364610942873 2889.3438057702797 3104.99705798485 3208.3259816842074 1.273797506641154 1.1055694847774535 1.193139138730144 0.980129137244589 0.9608018798620913 0.8100707593175074 0.6969601801793603 0.8756481189820056 0.9005767563100061 0.967793508424878 1.0 11.647605018807296 -6.363714315096217 2.17194066464655 0.9154864249526755 1.1921791509622226 0.681388066108872 0.08918253617373467 0.17939680485430953 1.633576368927531 0.014910431282403934 0.043216305304669037 4.327984382010737e-07 6.363714315096217 0.2766927260095471 SRDS(ph)DESGDKTTR ddPTM_A549_MK2206_60min_R1 4 SRDSDESGDKTTR 13 2 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 S(0.004)RDS(0.995)DES(0.001)GDKTTR;SRDS(0.994)DES(0.006)GDKTTR;S(0.006)RDS(0.994)DESGDKTTR;SRDS(0.99)DES(0.009)GDKTTR 141.22 8.9304e-13 411564000.0 8834.5 9594.9 9075.2 7655.090000000001 3829.5200000000004 2965.18 2215.4 2456.43 3688.89 13358.6 13082.4 True False 10325.54761721236 10083.23942686856 10362.199822759685 9530.587393650052 3266.20268093447 3278.9533794728136 2617.909503397915 2804.6364750013713 2853.3623049468542 10340.88298204937 9833.679024128163 1.050018776480027 1.0253781318393727 1.0537459883869231 0.969178205864312 0.33214452830120167 0.33344116392527057 0.2662187261730372 0.285207242184725 0.29016223713889505 1.0515782502842241 1.0 13.263515550349812 -6.6564355481734285 6.646175484032226 0.553488062644109 1.035191779662327 0.46384536750019223 0.2646795064358572 0.19981968908018946 11.234714763244753 0.046255173708042406 0.09674632373786125 2.2057914643836277e-07 6.6564355481734285 0.4817037170182179 SRDS(ph)DESGDKTTR ddPTM_A549_PD325901_60min_R1 4 SRDSDESGDKTTR 13 2 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YDU3;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 SRDS(0.997)DES(0.003)GDKTTR;SRDS(0.996)DES(0.004)GDKTTR;S(0.001)RDS(0.999)DESGDKTTR;SRDS(0.779)DES(0.2)GDKT(0.02)T(0.001)R 176.94 8.994400000000001e-23 946360000.0 10842.3 11668.0 10133.599999999999 11485.800000000001 12211.7 12957.7 10799.1 12634.7 12515.599999999999 13603.100000000002 13078.8 True False 11943.002314320593 12651.303308849556 10821.327034287098 12195.251779855578 11353.992320077963 12852.176787311748 11210.06565999427 12382.690996769603 11989.612856171385 12744.19794448043 11470.190513344127 1.041220919602548 1.1029723781947085 0.9434304531993468 1.0632126611731456 0.9898695498447927 1.1204850322546827 0.9773216623518821 1.0795540825903367 1.0452845436370892 1.111071165701577 1.0 13.48560173344671 -10.67917398509165 0.9729345067020437 1.000288997457051 1.040149630939481 0.0 0.060464778853182855 1.1052333006455268 1.883130017690145 0.029854846284865864 0.00813698693840429 2.0932736900100013e-11 10.67917398509165 0.039860633482430075 SRDS(ph)FLK ddPTM_A549_MK2206_60min_R1 2 SRDSFLK 7 1 P46778;M0R181 P46778 RPL21 60S ribosomal protein L21 1 S(0.011)RDS(0.989)FLK;S(0.145)RDS(0.855)FLK 66.692 0.0067149 14320200.0 2397.3999999999996 2346.4700000000003 2551.8 2309.45 3656.6000000000004 2647.3 2458.0 3194.4 3737.7999999999997 3132.6 3611.3 True False 2802.0225091974535 2465.895300416291 2913.6836111290268 2875.2653536751495 3118.7189838687295 2927.4355288644806 2904.5867831326495 3647.2159824397113 2891.194268040075 2424.9434843148138 2714.514543190395 1.0322370591922523 0.9084111583053448 1.0733718920159279 1.0592189903303382 1.1489048720303665 1.078437960926832 1.0700207115924532 1.3435978788874356 1.0650870430194956 0.893324918961294 1.0 11.406478497883661 -5.785191582354905 24.601447295614836 1.0698734177203593 0.9703241176316113 0.13173653488145165 0.10664775997174163 255.59681258777925 264735.99719501357 0.013742094540347513 0.04276208283485025 1.6398662117697275e-06 5.785191582354905 -0.09954930008874796 SRDS(ph)FLK ddPTM_A549_PD325901_60min_R1 2 SRDSFLK 7 1 P46778;M0R181 P46778 RPL21 60S ribosomal protein L21 1 S(0.219)RDS(0.781)FLK;S(0.044)RDS(0.956)FLK 61.78 0.0077447 29531000.0 5614.299999999999 6002.3 6357.299999999999 6493.9 6897.0 6049.2 5693.9 5719.5 5772.9 6937.1 6255.8 True False 6184.259602970782 6508.134886073685 6788.744607550464 6895.0134542830365 6412.578513358309 5999.937320805871 5910.584480321632 5605.420085639048 5530.285088800519 6499.090322107106 5486.376258783543 1.1272029680920894 1.1862356096438582 1.237382251478262 1.2567518392936146 1.1688185809516694 1.0936066062184728 1.0773202933099864 1.0216980792494716 1.0080032480358376 1.1845870599381942 1.0 12.421637851082146 -7.634321598575175 1.2304116209315927 1.0044016403823393 1.2040772338531573 0.45663514981571574 0.06381466012139818 0.10789145905130462 0.32957987887339596 0.00591227378917294 0.01024965523173042 2.3210174276615626e-08 7.634321598575175 0.1996755934708181 SRDS(ph)GDENEPIQER ddPTM_A549_MK2206_60min_R1 4 SRDSGDENEPIQER 14 1 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 1 S(0.169)RDS(0.831)GDENEPIQER;S(0.001)RDS(0.999)GDENEPIQER;S(0.325)RDS(0.675)GDENEPIQER;S(0.003)RDS(0.997)GDENEPIQER 136.04 1.2066e-09 442762000.0 1159.26 826.6 1051.74 1020.4899999999999 1354.9 1132.0800000000002 894.1099999999999 935.09 1445.66 1347.7300000000002 1744.86 True False 1354.9147468141489 868.6704093059392 1200.892546895856 1270.510095811536 1155.5960048251775 1251.8759541861145 1056.5582134526985 1067.6418710930222 1118.22031824464 1043.276856960864 1311.563106313845 1.033053415647032 0.662316898915632 0.9156193408573154 0.9686991725333837 0.8810830369214837 0.9544915895846738 0.8055717703299545 0.8140224941929293 0.8525859814610096 0.7954454131398977 1.0 10.357071509707387 -10.71022727143977 0.9885824574243391 0.999350997197987 0.8722645087266814 0.0 0.11097066255884147 0.6673089682106755 1.1687089858335096 0.05853809098130994 0.015578351660739571 1.9488244899547826e-11 10.71022727143977 -0.12708648847130566 SRDS(ph)GDENEPIQER ddPTM_A549_PD325901_60min_R1 4 SRDSGDENEPIQER 14 1 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 1 S(0.274)RDS(0.726)GDENEPIQER;S(0.005)RDS(0.995)GDENEPIQER;S(0.163)RDS(0.837)GDENEPIQER;SRDS(1)GDENEPIQER 128.9 9.2794e-09 589311000.0 1351.7900000000002 1290.75 1615.93 1204.83 1546.1299999999999 1664.2 1580.9299999999998 1301.23 1155.3600000000001 1481.5400000000002 1511.8400000000001 True False 1489.022725664798 1399.5260323875198 1725.5967271764785 1279.2496127325378 1437.535162658937 1650.6473069637507 1641.0931562680896 1275.275946854813 1106.8042370726278 1387.9953115588012 1325.893264343378 1.1230336300125987 1.055534461200093 1.3014597581737062 0.9648209604308235 1.0842012711866724 1.2449322666867915 1.2377264448061045 0.9618239877599557 0.8347611884285048 1.0468378932795757 1.0 10.37274892647731 -8.395300563152128 5.83130751250247 0.9209207810380591 1.1412218791105575 0.40731874212730657 0.10339421140670206 0.146806123213084 6.4238283733605375 0.01721008886104736 0.020815331061069378 4.0243842146923856e-09 8.395300563152128 0.22030109807249842 SREDAGDNDDT(ph)EGAIGVR ddPTM_A549_MK2206_60min_R1 3 SREDAGDNDDTEGAIGVR 18 1 Q9H0S4;Q9H0S4-2 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 SREDAGDNDDT(1)EGAIGVR;SREDAGDNDDT(1)EGAIGVR;SREDAGDNDDT(1)EGAIGVR 127.8 8.189600000000001e-13 8716250.0 1277.46 1520.92 1388.72 1334.75 2133.94 1452.1100000000001 1199.14 1111.9 2331.8 1978.2599999999998 2340.71 True False 1493.064017101603 1598.328331625439 1585.6613780261405 1661.7638099192047 1820.0402528132256 1605.7713163673934 1417.0082160804259 1269.5152300509371 1803.6510231194413 1531.3696920387601 1759.447106690441 0.8485984099346354 0.9084264741734295 0.901227079800543 0.9444806857791931 1.0344387426552206 0.912656771699085 0.8053713070953578 0.7215421397003081 1.025123754082127 0.8703698373287848 1.0 10.780906428438552 SREDAGDNDDT(ph)EGAIGVR ddPTM_A549_PD325901_60min_R1 1 SREDAGDNDDTEGAIGVR 18 1 Q9H0S4;Q9H0S4-2 Q9H0S4 DDX47 Probable ATP-dependent RNA helicase DDX47 1 SREDAGDNDDT(1)EGAIGVR 124.08 5.6646e-11 12677000.0 574.81 552.95 495.07 664.36 721.69 566.17 480.68 668.93 761.38 562.02 659.49 True False 633.1642880472432 599.5490370781935 528.6684272977534 705.3960083289671 671.0009840953397 561.5592992330651 498.97254043818845 655.587666384567 729.3818463702717 526.5339612850665 578.3769108515548 1.094726079426345 1.03660610551598 0.9140552075624617 1.2196130154822393 1.1601448320393923 0.9709227472553686 0.8627117215027518 1.13349557024905 1.261083962180284 0.910364766307564 1.0 9.175866149973782 SREDS(ph)PELNPPPGIEDNR ddPTM_A549_MK2206_60min_R1 2 SREDSPELNPPPGIEDNR 18 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.117)REDS(0.883)PELNPPPGIEDNR;S(0.228)REDS(0.772)PELNPPPGIEDNR 133.47 3.2049000000000003e-13 53967000.0 5202.5 5809.2 4762.200000000001 4634.3 6386.6 5016.8 4600.1 5224.2 6944.299999999999 8366.4 7368.6 True False 6080.554811086909 6104.863466900624 5437.5515686647295 5769.703708041635 5447.139600277865 5547.67444611768 5435.878625341133 5964.746348441508 5371.427137768395 6476.42442928285 5538.773256985776 1.097816164151116 1.1022049799927929 0.9817248903999851 1.0416934292741804 0.9834559653453337 1.0016070686989538 0.9814228481884743 1.0769074796334142 0.9697864289702931 1.1692886003438507 1.0 12.435350764178336 -5.75750043994014 24.998685345216607 0.9956946241341113 1.1000106199370212 0.07141575544792023 0.06039963140191145 44.09304518051434 279826.8432596945 0.004137874159669795 0.01490777959448607 1.7478314918647065e-06 5.75750043994014 0.10431599580290996 SREDS(ph)PELNPPPGIEDNR ddPTM_A549_PD325901_60min_R1 4 SREDSPELNPPPGIEDNR 18 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.024)REDS(0.976)PELNPPPGIEDNR;S(0.111)REDS(0.889)PELNPPPGIEDNR;S(0.016)REDS(0.984)PELNPPPGIEDNR;S(0.002)REDS(0.998)PELNPPPGIEDNR 119.28 1.0189e-10 67994100.0 5480.33 4809.59 4703.86 4823.509999999999 6484.9 5793.75 5161.709999999999 4658.9800000000005 5897.740000000001 5459.42 6288.2 True False 6036.689067194283 5214.911028557576 5023.092226208031 5121.447257713976 6029.422995690492 5746.567620911692 5358.141698646093 4566.052989000895 5649.878497743314 5114.711289489551 5514.791264184065 1.0946360030704507 0.9456225591757085 0.9108399548738346 0.9286747244588076 1.0933184425036564 1.0420281286497466 0.9715946519036294 0.8279647896476569 1.0244954390996766 0.9274532877984263 1.0 12.429090565251986 SRENS(ph)VCSDTSESSAAEFDDRR ddPTM_A549_PD325901_60min_R1 1 SRENSVCSDTSESSAAEFDDRR 22 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.462)RENS(0.507)VCS(0.03)DTSESSAAEFDDRR 58.876999999999995 0.00052697 2968100.0 534.55 482.91 524.65 371.82 648.17 218.05 431.24 357.13 423.91 370.07 368.84 True False 588.8171224850882 523.6065204727923 560.2559039767436 394.78647693551176 602.6447752651088 216.27427309424706 447.6510741835829 350.0067619869348 406.0945368867344 346.70371704345877 323.4750182694011 1.8202862330305245 1.6186922973962548 1.7319912584722177 1.2204542998331946 1.8630334376029172 0.6685965248609289 1.3838814402995527 1.0820209976630626 1.2554123624734597 1.0718098692700653 1.0 8.337510488049626 -6.626049561585105 0.7447158838177793 1.1127445563584102 1.79474481056842 0.48257227044756834 0.2623986338749542 0.5284990636475696 0.49040245929582615 0.04225853634216365 0.20550957393627917 2.3656497146865086e-07 6.626049561585105 0.6820002542100099 SRENSVCS(ph)DTSESSAAEFDDRR ddPTM_A549_MK2206_60min_R1 1 SRENSVCSDTSESSAAEFDDRR 22 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.256)RENS(0.256)VCS(0.294)DT(0.046)S(0.046)ES(0.052)S(0.052)AAEFDDRR 55.049 0.0020765999999999996 2768300.0 503.6 558.72 400.98 280.94 647.86 471.6 554.14 448.45 559.71 568.19 508.55 True False 588.5953681621085 587.1564615139296 457.8449934910723 349.77031261187585 552.5606522149524 521.504398977256 654.8200650956578 512.0191608205259 432.9365786732067 439.8354843749068 382.2629997340225 1.5397654718653162 1.5360012921011748 1.197722494224237 0.914999131109328 1.4454986556361 1.3642554977597026 1.7130092777780734 1.339442114922939 1.1325620815366455 1.15060961872047 1.0 8.578421754363829 -8.856009134761555 2.8596434926594885 1.0544155571435068 1.378787580205986 0.29773501537396607 0.1972690115875869 0.2234689422969079 3.5159796578290874 0.03795994760631338 0.040034701874947634 1.3931275001982117e-09 8.856009134761555 0.32437202306247914 SRENSVCS(ph)DTSESSAAEFDDRR ddPTM_A549_PD325901_60min_R1 1 SRENSVCSDTSESSAAEFDDRR 22 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.307)RENS(0.307)VCS(0.368)DT(0.005)S(0.005)ES(0.007)S(0.001)AAEFDDRR 75.623 6.0648999999999995e-05 2941200.0 523.53 631.49 427.59 336.21 571.58 441.61 511.28 557.99 499.66 594.56 637.24 True False 576.6783801975836 684.7078785143476 456.60882870754926 356.9769281116896 531.4341926439529 438.0136745753286 530.7370401831515 546.8604517153132 478.6610278144551 557.0193801317555 558.8635197971839 1.0318769427048393 1.2251790540252718 0.8170310147873961 0.6387551082977099 0.9509194531731372 0.7837578568990999 0.9496720064601109 0.9785223625148645 0.856490021012939 0.9967001967383777 1.0 9.126352194932204 -5.763343142436913 24.999778607595637 0.9012403407905919 1.1285280114596397 0.40221194188852594 0.11286741257206813 36.654726750944796 481377.2534884297 0.015898128207169106 0.053355612377264904 1.724474820733146e-06 5.763343142436913 0.22728767066904776 SREQS(ph)SEAAETGVSENEENPVR ddPTM_A549_MK2206_60min_R1 2 SREQSSEAAETGVSENEENPVR 22 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 S(0.283)REQS(0.357)S(0.357)EAAET(0.002)GVSENEENPVR;S(0.294)REQS(0.35)S(0.35)EAAET(0.004)GVS(0.001)ENEENPVR 53.481 0.0021933000000000005 3863100.0 204.48 410.32 0.0 392.73 349.3 0.0 252.33999999999997 387.31 340.65 723.9000000000001 735.01 True False 238.99122494397918 431.2035353815786 0.0 488.94886763031997 297.918432714912 0.0 298.1869116581336 442.2123785871288 263.4933189062688 560.3704872296152 552.4867317559803 0.4325736912891796 0.7804776306773473 0.0 0.8849965791509299 0.53923183235194 0.0 0.5397177787607674 0.8004036172626913 0.4769224377005443 1.0142695833591837 1.0 9.109796007654904 -10.965506330121366 0.47441091697359256 1.1654215236204621 0.47254241998415836 0.3497401189125904 0.2723232166857419 1.8670198306034598 0.4782303275145595 0.6277574070196819 0.06546770034990729 1.0826639344891927e-11 10.965506330121366 -0.6928791036363038 SREQS(ph)SEAAETGVSENEENPVR ddPTM_A549_PD325901_60min_R1 1 SREQSSEAAETGVSENEENPVR 22 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 S(0.272)REQS(0.364)S(0.364)EAAETGVSENEENPVR 80.02 3.1491e-05 1804700.0 401.57 226.54 174.74 238.52 294.55 487.8 282.44 284.45 286.3 224.69 304.51 True False 442.33709077979034 245.63132084219913 186.59890719698114 253.25283868177675 273.8618241423357 483.82751852957443 293.1884087570983 278.77642160329185 274.26780663506906 210.50303505416474 267.05720044793225 1.6563383800843525 0.919770447792474 0.6987226215357637 0.9483093444288281 1.0254800233170651 1.8116999568558931 1.0978487315276892 1.0438828128794246 1.027000231317645 0.7882320143440814 1.0 8.061004972752125 -8.228987871401372 4.8704305348762205 1.0150885527337608 1.1501454297743 0.07964629625037656 0.31061726374290505 0.6118869519577775 37.730118798037275 0.049823956566208284 0.06372530227861972 5.9021756302453e-09 8.228987871401372 0.13505687704053915 SREQSSEAAETGVS(ph)ENEENPVR ddPTM_A549_MK2206_60min_R1 2 SREQSSEAAETGVSENEENPVR 22 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 SREQSSEAAET(0.002)GVS(0.998)ENEENPVR;SREQSSEAAET(0.002)GVS(0.998)ENEENPVR 138.71 5.0025e-23 38405000.0 777.39 965.36 984.4000000000001 1220.8 1595.9 1135.73 768.0899999999999 936.4 1646.81 1800.7 1794.36 True False 908.5944266392803 1014.4927006140593 1124.0027223118636 1519.8960548037953 1361.1452240759459 1255.9121947634408 907.6420106820002 1069.1375676047292 1273.8101644151855 1393.9206193595369 1348.7708901833453 0.673646230988697 0.7521608806934988 0.8333533370957259 1.1268748946659044 1.0091745262169163 0.9311530993916382 0.6729400947840888 0.7926754465018117 0.9444229362349524 1.0334747209513502 1.0 10.397429589458248 -5.877735421365349 3.199780793007181 0.9471924187394609 0.7063942771404997 0.35517779309468656 0.11692487327086079 0.20170100143490685 4.030604367802245 0.017219385543249328 0.06485868732182538 1.3251485894945006e-06 5.877735421365349 -0.24079814159896118 SREQSSEAAETGVS(ph)ENEENPVR ddPTM_A549_PD325901_60min_R1 2 SREQSSEAAETGVSENEENPVR 22 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 SREQSSEAAETGVS(1)ENEENPVR;SREQSSEAAET(0.006)GVS(0.994)ENEENPVR 212.77 1.0368999999999998e-73 46209000.0 2437.7 1702.69 1924.5900000000001 2568.6 2507.0 2467.17 2145.73 2652.1 2964.9 2070.15 2337.97 True False 2685.1735094601067 1846.1816618910739 2055.204250899841 2727.256588286147 2330.9169686804817 2447.0781855076066 2227.38692933851 2599.201784967799 2840.295563717486 1939.44037570599 2050.414511612928 1.3095759390367634 0.9003943599866558 1.0023359858505612 1.3301001201658444 1.1368028052273687 1.1934553582449283 1.0863105565841755 1.267646990521529 1.3852299364986496 0.9458772188362821 1.0 11.001699878976748 -6.234147107553569 24.472986384641526 1.190380408679954 1.053731316998702 0.056601976461269965 0.15515544179544127 986.3096651002703 884421.9875614137 0.02290095214621398 0.06057121960835408 5.832475087463102e-07 6.234147107553569 -0.13664909168125217 SRERS(ph)PS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 SRERSPSPLR 10 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 S(0.113)RERS(0.893)PS(0.994)PLR 43.03 0.022680000000000002 5975800.0 176.61 138.83 237.96 262.51 198.16 140.28 292.73 146.35 279.61 317.95 352.66 True False 206.41745030005947 145.8958540091259 271.70630617770337 326.82496178452163 169.0109265009647 155.12433648967232 345.9152518415057 167.0955606780778 216.27878144541867 246.1248741741347 265.0847890791472 0.7786846277265226 0.5503742953940874 1.024978864768356 1.2329072630679707 0.637573084023703 0.5851876187560364 1.3049230513872478 0.6303476003226558 0.8158852954057793 0.9284760360227551 1.0 8.050310078577866 -10.735907694415369 0.9803542954655186 1.000465072301471 0.8421128111385049 0.0347109526331848 0.24258641482698076 1.4847069212854194 2.5266674311975454 0.1635740760475988 0.041757338976509656 1.8369287253797274e-11 10.735907694415369 -0.15835226116296608 SRERS(ph)PS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 SRERSPSPLR 10 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 S(0.104)RERS(0.899)PS(0.997)PLR 46.481 0.011093 7901200.0 146.26 100.08 235.7 242.05 189.52 158.79 236.22 0.0 125.96 283.45 338.69 True False 161.10820752907875 108.51409283079057 251.69601937924034 257.0008787645653 176.20876900850612 157.4968668866567 245.2094813645438 0.0 120.66633923769922 265.5529186261204 297.0332771328044 0.5423911054149223 0.3653263832195933 0.8473664022051858 0.865225880565764 0.5932290506619657 0.5302330715498904 0.8255286536629697 0.0 0.40623845382734325 0.8940174016508963 1.0 8.214480757383665 -10.856465926031708 1.173403912983195 0.9934337441250318 0.547895290740301 0.2841659468127389 0.23972391287908157 0.45807769427005046 1.145506666898211 0.15933754353751184 0.04124199855767644 1.3916629779496484e-11 10.856465926031708 -0.44553845338473086 SRERS(ph)PS(ph)PLRGNVVPS(ph)PLPTR ddPTM_A549_PD325901_60min_R1 2 SRERSPSPLRGNVVPSPLPTR 21 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 S(0.525)RERS(0.741)PS(0.735)PLRGNVVPS(0.957)PLPT(0.042)R;S(0.463)RERS(0.77)PS(0.77)PLRGNVVPS(0.982)PLPT(0.015)R 62.858000000000004 0.00053692 68682000.0 3271.1 3834.6 4927.5 3850.7 4358.9 4232.9 4462.4 4910.799999999999 4310.6 4835.200000000001 5169.5 True False 3603.1796639434538 4157.75519952987 5261.909781464601 4088.548993425781 4052.7459013886537 4198.42866581352 4632.219073918977 4812.850241551925 4129.440472515294 4529.904646819605 4533.684272160475 0.7947575189717391 0.9170808882879132 1.1606255454919665 0.9018159951128291 0.8939188655625911 0.926052281936432 1.0217339355463204 1.061575961763746 0.9108354760988806 0.9991663236533519 1.0 12.146468209298668 -7.659020534980525 16.705936404965467 0.9707666391570661 0.9389153781531135 0.07998660014656356 0.0904942909393405 4.9985221835459015 793.4499619148564 0.014331416610760365 0.02125691480095581 2.1927012542217106e-08 7.659020534980525 -0.031851261003952525 SRES(ph)LNVDVVK ddPTM_A549_PD325901_60min_R1 2 SRESLNVDVVK 11 1 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3;H0YGB8 Q07866-6 KLC1 Kinesin light chain 1 1 S(0.197)RES(0.803)LNVDVVK;S(0.075)RES(0.925)LNVDVVK 130.27 2.6545e-08 32841000.0 2894.8 3128.4 2988.6000000000004 3093.0 3710.2 3302.8999999999996 3515.8999999999996 3662.3 3800.2 3119.1 3477.3 True False 3188.6779649608716 3392.0412471207565 3191.4243679117444 3284.0475852873383 3449.6083514951442 3276.0022774730037 3649.699498474304 3589.2525534812303 3640.4908095514793 2922.1594936910647 3049.614144420856 1.0456004641749275 1.1122853864402342 1.0465010380904496 1.0768731484589185 1.1311622350014545 1.074235008867045 1.19677419031889 1.1769530122516059 1.1937545660363649 0.9582063026029164 1.0 11.574411000404565 -6.630755823134342 7.296262386890469 1.1090570263522723 1.0708118224768701 0.046197826508021955 0.07309959379657238 0.6491464358883761 39.82172183920793 0.01156756089914079 0.02416527669015832 2.3401525915923397e-07 6.630755823134342 -0.0382452038754022 SRES(ph)VDSR ddPTM_A549_PD325901_60min_R1 3 SRESVDSR 8 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.049)RES(0.951)VDSR;S(0.017)RES(0.983)VDSR;S(0.02)RES(0.899)VDS(0.081)R 87.94200000000001 0.00075227 17575300.0 1347.74 1163.17 1142.5 1232.2 1252.99 1248.3 1006.8699999999999 1460.1299999999999 1333.73 1477.21 1636.05 True False 1484.5615726462502 1261.1944180454698 1220.0369204106155 1308.3101954707586 1164.984304980837 1238.1342586725464 1045.1869888304052 1431.0065617001733 1277.6779662710105 1383.9387084977645 1434.8262217754418 1.0346629787747161 0.8789875727841651 0.850302916056937 0.911824843744399 0.8119340776608439 0.8629158290266604 0.7284415164486607 0.9973378935948479 0.8904757571896217 0.9645340233504309 1.0 10.486660300890984 -10.34538283134904 0.6214636635484482 1.0047816114605066 0.8770650345028689 0.18338858854634366 0.07868011767938568 0.9593225770743457 0.6452641492053591 0.06309954829938659 0.016657016790243152 4.514578080705572e-11 10.34538283134904 -0.12771657695763772 SRESASPT(ph)IPNLDLLEAHTK ddPTM_A549_PD325901_60min_R1 1 SRESASPTIPNLDLLEAHTK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(0.138)RES(0.138)AS(0.091)PT(0.634)IPNLDLLEAHTK 130.83 4.9574e-17 11269000.0 278.74 582.31 336.9 445.38 580.61 473.96 548.05 461.13 570.74 630.11 667.98 True False 307.0374796024575 631.383307317123 359.76405994427716 472.8901110686307 539.8299565957615 470.1002269009374 568.9063426544673 451.93240040051336 546.7537826018134 590.3247470647543 585.8226946740989 0.5241133236964584 1.0777720171260523 0.6141176557600228 0.8072239525163938 0.9214903442688853 0.8024616170980889 0.9711237680386513 0.7714491167876818 0.9333093230640032 1.0076850085044247 1.0 9.194320273841388 -2.000000022749986 0.10080698010793407 1.0956171783292983 0.01580312462404129 0.29568325511258464 0.13801115053555962 97.24819631805842 0.6721152754591241 0.7888473292842867 14.5932570273793 0.00999999947616223 2.000000022749986 -1.079814053705257 SRFS(ph)ESESR ddPTM_A549_MK2206_60min_R1 1 SRFSESESR 9 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.018)RFS(0.98)ES(0.001)ESR 66.538 0.0014843 10669000.0 736.14 1047.0 736.55 676.39 1345.8 946.61 863.03 1122.6 1249.8 1498.7 1403.4 True False 860.382435104953 1100.2878279014253 841.0038654193451 842.1055803643009 1147.8346027704797 1046.7796418911366 1019.8313797587348 1281.7319878183139 966.7222955204901 1160.1426291076457 1054.8970481304232 0.8156079653742464 1.0430286347387618 0.797237860234648 0.7982822417189913 1.088101066170171 0.992305025164614 0.9667591558495355 1.2150304051849483 0.9164138787133742 1.0997685804162098 1.0 10.042886491746966 -6.753892441455965 24.99945122912642 0.9895409887045498 0.8716240554774712 0.33359140059459513 0.10536646436479176 201.7086154734468 668159.6355218352 0.014473904378639293 0.02967403126068942 1.762412476198289e-07 6.753892441455965 -0.11791693322707852 SRFS(ph)ESESR ddPTM_A549_PD325901_60min_R1 1 SRFSESESR 9 1 Q9BY89;A0A1B0GVJ7;Q9BY89-2 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.006)RFS(0.994)ESESR 86.911 0.00032401 9284900.0 597.28 410.46 467.72 655.36 970.24 653.4 461.58 609.1 554.07 539.58 807.15 True False 657.9154259057035 445.05090470949517 499.4622918288428 695.8400987694498 902.0936895462906 648.0789270340797 479.1456794862675 596.9510226702935 530.7843647303271 505.5108267147009 707.875666945416 0.9294222935288933 0.6287133821536104 0.7055791223677648 0.9829976241055136 1.2743674230800346 0.9155264932761883 0.6768783020242087 0.8432992551449351 0.7498271087926174 0.7141237512740788 1.0 9.467352173764843 -11.072201986540982 1.4139294338778394 0.9993377238086021 0.8439301760057232 0.0 0.18989175832983735 0.8876235749431696 3.1896247952347974 0.12855250912702285 0.0289073952574983 8.468334677449649e-12 11.072201986540982 -0.1554075478028789 SRFS(ph)GGFGAR ddPTM_A549_MK2206_60min_R1 3 SRFSGGFGAR 10 1 A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y5G6 1 S(0.409)RFS(0.591)GGFGAR;S(0.048)RFS(0.952)GGFGAR;S(0.056)RFS(0.944)GGFGAR 109.95 5.5700000000000005e-05 143642000.0 14726.699999999999 16035.699999999999 14079.5 13146.9 20144.9 15178.5 14793.400000000001 14951.5 21796.300000000003 21491.9 22571.3 True False 17212.20692675321 16851.84863598746 16076.184811854826 16367.891090186777 17181.611895787675 16784.678795327127 17481.169291128776 17070.920912048376 16859.472851538845 16636.864863227198 16966.223273810916 1.0144984330909987 0.993258686038866 0.9475405664777526 0.9647339202150118 1.012695142489916 0.9892996528718314 1.0303512460615045 1.0061709454454175 0.9937080621568354 0.9805874056194865 1.0 14.050377832435782 -6.764216664944958 24.994097630004717 1.0005407290349833 0.9786352912037628 0.21719911679568915 0.019770755612129175 85.25044344285041 767221.4257707143 0.002753918775350708 0.00537956582704583 1.7210097671239434e-07 6.764216664944958 -0.021905437831220453 SRFS(ph)GGFGAR ddPTM_A549_PD325901_60min_R1 4 SRFSGGFGAR 10 1 A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y5G6 1 S(0.235)RFS(0.765)GGFGAR;S(0.172)RFS(0.828)GGFGAR;S(0.005)RFS(0.995)GGFGAR;S(0.005)RFS(0.995)GGFGAR 110.17 5.4077e-05 258640000.0 18977.399999999998 18807.9 18627.699999999997 19238.4 21533.7 18381.1 18552.1 20059.800000000003 20348.1 20917.7 22777.3 True False 20903.971677576494 20392.90773933078 19891.88773945979 20426.712274423506 20021.247199232104 18231.410415834274 19258.11031759866 19659.691552391327 19492.940119423838 19596.952852162973 19975.836497201057 1.0464628943326346 1.0208787873383007 0.9957974847384725 1.0225710586530694 1.0022732816238964 0.9126731898505874 0.9640702816273571 0.9841736317348199 0.9758259746546843 0.9810329021720231 1.0 14.285968297475941 -5.7353903044716095 0.9102164563192694 0.9822046681010418 1.0531694970017753 0.43213988036043116 0.025332605219430756 1.0403093858905026 0.9921388365423259 0.004270177082028019 0.06172809528356447 1.8391184257824494e-06 5.7353903044716095 0.07096482890073352 SRFT(ph)PELQPK ddPTM_A549_PD325901_60min_R1 1 SRFTPELQPK 10 1 Q14676;Q14676-2;Q14676-3;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.22)RFT(0.78)PELQPK 78.964 0.00051232 8719400.0 1902.3 2243.7 1776.2 1749.7 2079.5 2256.8 1968.8 2415.5 2341.3 2432.9 2173.0 True False 2095.4200956007553 2432.784473265836 1896.7436131582817 1857.7749951429853 1933.4430938855444 2238.421369039656 2043.7237613686978 2367.3209575769074 2242.9033030900696 2279.2862787986883 1905.7347757819348 1.0995339552121 1.2765598362278137 0.9952820493502492 0.9748339688982842 1.0145394408790387 1.1745712978980603 1.072407234910296 1.2422090354129058 1.1769231120683057 1.1960144232890346 1.0 10.896131635657557 -7.24665010944069 24.745944723922268 1.1034748995143804 1.0738291037444747 0.03674248901862076 0.10053391539675333 3574.130598020497 5980364.488828217 0.016537162973395494 0.028548258516442323 5.666956651146793e-08 7.24665010944069 -0.02964579576990567 SRGPKS(ph)DDDGFEIVPIEDPAK ddPTM_A549_PD325901_60min_R1 1 SRGPKSDDDGFEIVPIEDPAK 21 2 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 S(0.464)RGPKS(0.536)DDDGFEIVPIEDPAK 110.31 7.0177e-11 43427000.0 1718.0 1899.3 1706.9 1755.6 1698.3 2052.2 1639.2 1674.5 2121.2 1933.3 1823.1 True False 1892.4100952752442 2059.3606765939303 1822.740498423528 1864.0394247431116 1579.0172668169369 2035.4875636047416 1701.5806530046577 1641.1007838801634 2032.0533406717018 1811.2311080609572 1598.8702575830862 1.1835920308730266 1.2880098724876772 1.1400177655308021 1.165847832807188 0.9875831133439433 1.2730786340860847 1.0642393558416883 1.0264127286731286 1.2709307281401505 1.1328193138065399 1.0 10.642837158855128 -11.08951690837117 1.4167066484692954 0.9999680700272532 1.1666217438386175 0.041872930690450505 0.10259673552732951 0.44921727982281373 1.610154823213715 0.0705494846765954 0.015436194070688717 8.13735179040114e-12 11.08951690837117 0.1666536738113643 SRGPT(ph)PPAMGPR ddPTM_A549_MK2206_60min_R1 1 SRGPTPPAMGPR 12 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.029)RGPT(0.971)PPAMGPR 41.743 0.025841000000000003 21328000.0 734.24 660.45 704.7 623.03 1022.3 663.2 708.65 527.42 924.12 1286.3 1220.1 True False 858.1617615554933 694.0640839899672 804.637056494485 775.6723779688799 871.9210242326212 733.3793838034694 837.4025320858229 602.1834001560079 714.808295516399 995.7239366258518 917.1154969530643 0.935718308551722 0.7567902693781302 0.8773562971814709 0.8457739298331548 0.9507210674439667 0.7996586975576991 0.913082959417792 0.6566058497066549 0.7794092433190899 1.0857126936944677 1.0 9.840959620856673 -10.847811961185899 1.1524859461233354 0.9979189899079945 0.8304012190526429 0.43701627257416764 0.08708725009528737 0.40657328444451263 0.9773894315572706 0.052647371307808694 0.013550694545131647 1.41967207167786e-11 10.847811961185899 -0.1675177708553517 SRGPT(ph)PPAMGPR ddPTM_A549_PD325901_60min_R1 1 SRGPTPPAMGPR 12 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.018)RGPT(0.982)PPAMGPR 49.595 0.0087485 40711000.0 2465.9 2241.2 2320.4 2149.4 2306.2 2077.4 2010.4 2412.8 2344.0 2619.7 2924.0 True False 2716.2363527003663 2430.0737894920844 2477.876297698726 2282.163556358424 2144.220467958087 2060.482343159774 2086.9068721330923 2364.674811195017 2245.4898314795732 2454.2916949192 2564.3665367631743 1.0592231312333715 0.9476312198954996 0.966272279011401 0.889952166993664 0.8361599003957487 0.8035053934842641 0.8138098989418467 0.9221282438741325 0.8756508865982562 0.9570752307574117 1.0 11.324386772428712 -5.094095323184043 1.3162120306363947 0.9110067546251737 1.1656949695891796 0.36998912602738954 0.06082587885770902 2.2110485359806047 2.4793154198683287 0.011108272680100957 0.8331333788091889 8.05201688290751e-06 5.094095323184043 0.25468821496400595 SRGS(ph)PRYS(ph)PR ddPTM_A549_MK2206_60min_R1 7 SRGSPRYSPR 10 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 S(0.439)RGS(0.56)PRY(0.055)S(0.946)PR;S(0.441)RGS(0.559)PRY(0.001)S(0.999)PR;S(0.461)RGS(0.541)PRY(0.02)S(0.977)PR;S(0.427)RGS(0.552)PRY(0.178)S(0.843)PR;S(0.34)RGS(0.661)PRY(0.005)S(0.995)PR;S(0.367)RGS(0.633)PRY(0.003)S(0.997)PR;S(0.125)RGS(0.874)PRY(0.026)S(0.975)PR 73.92699999999999 0.0013660999999999999 386294000.0 11821.08 12913.14 10565.26 10098.09 13135.319999999998 10130.33 10262.289999999999 9650.57 15183.339999999998 17446.93 18428.81 True False 13816.18930634181 13570.363669519576 12063.572736623973 12572.122503320485 11203.131828253183 11202.314796631175 12126.815255766625 11018.56785113111 11744.337732811713 13505.65639558087 13852.427867718701 0.9973839559589882 0.9796379233378693 0.8708634220530089 0.9075753812527114 0.8087486132564992 0.808689632142877 0.8754288686120218 0.7954250299190125 0.847818003093911 0.9749667368457527 1.0 13.757851234217345 -5.698683558133656 6.270162936491876 0.8943092988994275 0.9912346249057767 0.2803324371105582 0.0642910478649233 0.2715508689479687 20.031290866793483 0.011034658343613054 0.04347155480646113 2.001319568634976e-06 5.698683558133656 0.09692532600634929 SRGS(ph)PRYS(ph)PR ddPTM_A549_PD325901_60min_R1 9 SRGSPRYSPR 10 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 S(0.363)RGS(0.636)PRY(0.003)S(0.998)PR;S(0.1)RGS(0.891)PRY(0.012)S(0.996)PR;S(0.16)RGS(0.852)PRY(0.255)S(0.733)PR;S(0.403)RGS(0.597)PRY(0.015)S(0.985)PR;S(0.454)RGS(0.541)PRY(0.008)S(0.998)PR;S(0.398)RGS(0.603)PRY(0.001)S(0.999)PR;S(0.225)RGS(0.66)PRY(0.257)S(0.858)PR;S(0.404)RGS(0.596)PRY(0.105)S(0.895)PR;S(0.419)RGS(0.581)PRY(0.018)S(0.982)PR 62.258 0.0023828000000000005 650491900.0 14620.039999999999 13711.230000000001 14059.49 13868.84 17402.010000000006 15744.779999999999 13998.329999999998 14582.539999999999 16056.199999999999 16564.13 18034.43 True False 16104.25569809539 14866.723471665875 15013.65153798149 14725.48674837905 16179.752851275398 15616.559731845176 14531.044108330087 14291.679799918682 15381.413750939559 15518.268004947893 15816.309439670971 1.0182056540764297 0.9399615965009313 0.9492512520224073 0.9310317811210822 1.0229790276290893 0.9873706499871091 0.9187379751108599 0.9036039573221699 0.9725033396450506 0.9811560695711022 1.0 13.949125381747901 -9.660676631307258 1.461621362732211 0.9935978817674089 0.958869588869718 0.08913648748009773 0.03658613025038424 0.5260778564787348 2.272344387018738 0.009351168884957517 0.006922818839046927 2.184355742670695e-10 9.660676631307258 -0.03472829289769097 SRGST(ph)NLFSK ddPTM_A549_MK2206_60min_R1 1 SRGSTNLFSK 10 1 J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;A2SY06 J3KNR0 MARK3 MAP/microtubule affinity-regulating kinase 3 1 S(0.373)RGS(0.246)T(0.381)NLFSK 78.486 0.00052576 9888300.0 2230.0 2010.8 2288.6 2062.1 3029.7 2459.4 1953.2 2128.4 3106.0 2994.5 3436.9 True False 2606.369481734513 2113.141131178783 2613.1578934202885 2567.314592571186 2584.0351434193203 2719.652075582408 2308.071157369686 2430.107217951629 2402.495959262796 2318.0403702294275 2583.4228763855303 1.0088822490343072 0.8179617632461631 1.011509930219539 0.9937647514227785 1.0002369983789283 1.0527320557707054 0.8934159321988008 0.9406540602255542 0.9299662015163892 0.8972748485809648 1.0 11.335068099906595 SRIPS(ph)PLQPEMQGTPDDEPSEPEPSPSTLIYR ddPTM_A549_MK2206_60min_R1 3 SRIPSPLQPEMQGTPDDEPSEPEPSPSTLIYR 32 1 Q96GY3;K7EMY4 Q96GY3 LIN37 Protein lin-37 homolog 1 S(0.061)RIPS(0.897)PLQPEMQGT(0.042)PDDEPSEPEPSPSTLIYR;S(0.057)RIPS(0.94)PLQPEMQGT(0.003)PDDEPSEPEPSPSTLIYR;S(0.07)RIPS(0.907)PLQPEMQGT(0.018)PDDEPS(0.004)EPEPSPSTLIYR 85.001 6.3899e-07 35002100.0 1737.3999999999999 2090.7599999999998 1792.6100000000001 1150.37 2583.1000000000004 1576.8 1477.2 1934.9300000000003 2658.13 2606.65 2312.74 True False 2030.6306446482267 2197.170753642009 2046.829053274553 1432.210701642071 2203.12941181188 1743.6559294048714 1745.5881188134872 2209.212252974604 2056.0677991613707 2017.8059546029506 1738.42282962317 1.1680878840554558 1.263887424970299 1.1774057602075065 0.8238563583248184 1.2673150480251356 1.0030102571667423 1.004121718300185 1.2708141053655426 1.1827202013948788 1.16071068569684 1.0 10.763563310432822 -10.928671863530695 1.2275350861667667 1.0010892463672547 1.1311191043963194 0.0 0.13900631945875117 0.8102477195218462 2.1985825282592 0.0865823465473203 0.021127745157375897 1.1784960642304813e-11 10.928671863530695 0.13002985802906464 SRIPSPLQPEMQGT(ph)PDDEPSEPEPSPSTLIYR ddPTM_A549_MK2206_60min_R1 1 SRIPSPLQPEMQGTPDDEPSEPEPSPSTLIYR 32 1 Q96GY3;K7EMY4 Q96GY3 LIN37 Protein lin-37 homolog 1 S(0.016)RIPS(0.467)PLQPEMQGT(0.515)PDDEPS(0.003)EPEPSPSTLIYR 50.229 0.002303 17338000.0 346.67 409.77 290.24 257.3 233.2 346.3 367.04 387.18 679.55 529.48 779.98 True False 405.1794207322441 430.62554273081867 331.4003963061716 320.33851155063576 198.89658891817206 382.94523614466436 433.72641695728555 442.0639506890207 525.6330100183621 409.87010026016924 586.2894396471197 0.6910911118851408 0.7344930909722795 0.565250495566895 0.5463828782988885 0.33924641221217533 0.6531675487369418 0.739782072858655 0.7540029220978183 0.8965418349249716 0.6990917327572281 1.0 9.195469260655553 -8.486014863636246 1.0295386085472364 0.9661833548814059 0.582708366101241 0.4141356098025599 0.1280568415137834 0.18984276081660295 0.3931908853076899 0.022303537577373574 0.026602478877014935 3.2657665496453187e-09 8.486014863636246 -0.38347498878016495 SRLDQELK ddPTM_A549_MK2206_60min_R1 2 SRLDQELK 8 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 ; 87.476 0.0027386 5455700.0 2308.76 4448.6 2882.2 4309.3 6168.4 3320.5 2578.1000000000004 2307.97 5920.1 4366.4 5164.6 False True 2698.42224423739 4675.014738493101 3290.9392993165934 5365.0786934518255 5261.036531230069 3671.8731060304885 3046.50739853307 2635.131815361689 4579.206802457074 3380.0272074034965 3882.087284291281 0.6950957169758787 1.204252866083246 0.8477241901884213 1.3820087753207955 1.3552082026899948 0.9458502184864787 0.7847601497422911 0.6787925212358439 1.1795733756390954 0.8706726458935244 1.0 11.922616840425805 SRLDQELK ddPTM_A549_PD325901_60min_R1 2 SRLDQELK 8 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 ; 114.89 0.0013311 22977000.0 6494.1 7105.9 7280.5 7031.9 8209.6 7497.5 7512.2 8449.8 8317.0 7741.1 9037.5 False True 7153.376251296253 7704.739131158217 7774.59851120305 7466.244492396387 7632.986017582479 7436.4428457881995 7798.080881833576 8281.262110260133 7967.465413146592 7252.325624895611 7925.944793432692 0.9025266309227165 0.972090940822883 0.9809049537721932 0.9420005673749828 0.9630379994454473 0.938240555491872 0.9838676757242794 1.0448296482107535 1.0052385703907885 0.9150108679667779 1.0 12.952367203202117 -7.965853477172008 5.957887118783587 1.006127700719733 0.9528621993203399 0.1983528620640066 0.035639885068529754 0.09911909314797321 9.856465046993955 0.00342099286724235 0.004711109979523027 1.0817988684227832e-08 7.965853477172008 -0.05326550139939301 SRLDS(ph)YVR ddPTM_A549_MK2206_60min_R1 1 SRLDSYVR 8 1 Q9Y5R8 Q9Y5R8 TRAPPC1 Trafficking protein particle complex subunit 1 1 S(0.009)RLDS(0.991)YVR 72.2 0.0016081 10827000.0 537.11 710.89 352.91 362.52 889.09 406.46 616.99 359.09 770.79 940.97 670.42 True False 627.7610369212667 747.0712645433085 402.9579446678991 451.33741627414133 758.3060387704014 449.471327413688 729.0890965520806 409.9921071670034 596.2072956987022 728.4042234679531 503.9362113492938 1.2457152766228703 1.4824718837787394 0.7996209353342073 0.8956241010458076 1.5047659241236706 0.8919210751103288 1.4467884627697976 0.8135793736061272 1.183100722415545 1.445429415595367 1.0 8.977097317558934 -14.999557425158068 0.02190974975394333 0.04794540263723882 1.886510247442977 0.0 0.2789496779919397 5373.216039779243 9.138356670338403 527.1053762032356 277.27326936668123 1.0010195856579884e-15 14.999557425158068 1.8385648448057381 SRLDS(ph)YVR ddPTM_A549_PD325901_60min_R1 3 SRLDSYVR 8 1 Q9Y5R8 Q9Y5R8 TRAPPC1 Trafficking protein particle complex subunit 1 1 S(0.05)RLDS(0.948)Y(0.001)VR;S(0.002)RLDS(0.998)YVR;S(0.381)RLDS(0.619)YVR 79.65899999999999 0.0011302999999999999 23214500.0 5567.299999999999 5841.4 5576.9 5997.9 6512.299999999999 5709.700000000001 5719.0 5994.5 6111.0 6541.0 7343.5 True False 6132.488197570356 6333.675278395083 5955.38197062404 6368.37666078077 6054.898514215356 5663.202096245002 5936.639674556877 5874.934994905724 5854.175921574944 6128.000143705957 6440.296054281936 0.9522059461060133 0.9834447399640945 0.9247062433821667 0.9888329056777834 0.940158412467647 0.879338783265985 0.9217960827452653 0.9122150512008959 0.9089917407884843 0.9515090753679958 1.0 12.652911293844708 -4.0133481411244905 15.720512064070043 0.9473593830518929 0.9462379658748519 0.0 0.0361643380355856 0.0 0.0 0.0057467618234160415 0.0 9.69732294359103e-05 4.0133481411244905 -0.001121417177041062 SRLFS(ph)DEDDRQINTR ddPTM_A549_MK2206_60min_R1 1 SRLFSDEDDRQINTR 15 2 H0Y322;Q5TKA1;Q5TKA1-2;B1B047 H0Y322 LIN9 Protein lin-9 homolog 1 S(0.139)RLFS(0.861)DEDDRQINTR 67.43 0.0006144999999999999 2534200.0 471.08 397.75 276.75 330.14 577.35 310.81 334.63 281.72 666.08 515.37 651.01 True False 550.5867871997734 417.99377607238927 315.9973114585619 411.02431482054783 492.4225798109201 343.69970790101985 395.42793947912037 321.6546727313159 515.2139435111925 398.94755905998994 489.3462500380411 1.1251476580375788 0.8541881664361278 0.6457540267939046 0.8399457741601072 1.0062866115202473 0.7023650592485405 0.808073913815382 0.6573150866207944 1.0528617384339627 0.8152664070256517 1.0 8.934711833770319 -8.791974120152224 24.99880115791904 1.0249625361371717 0.8257946934441103 0.0766862205068588 0.1492158093589505 172.18575977794626 140967.77035755618 0.022926255046161317 0.024408229910489816 1.6144547602099042e-09 8.791974120152224 -0.19916784269306143 SRLNS(ph)HGGR ddPTM_A549_MK2206_60min_R1 2 SRLNSHGGR 9 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IU26;B1AN86 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.003)RLNS(0.997)HGGR;S(0.01)RLNS(0.99)HGGR 49.423 0.0084379 22572000.0 1327.48 1883.3700000000001 1607.78 1130.62 1842.37 1277.3400000000001 1419.15 1339.25 2478.5 2175.07 2418.07 True False 1551.5261702300156 1979.2254884763202 1835.787380006674 1407.6219507554601 1571.359813572782 1412.507270970331 1676.9911852248583 1529.0927887811124 1917.1237073512045 1683.7201763482783 1817.5964836630571 0.8536142010481765 1.0889245804918852 1.0100082149735217 0.7744413919191993 0.8645262178357503 0.7771291833287785 0.9226421817482653 0.8412718678347603 1.0547576013613138 0.9263443187098526 1.0 10.827816233570458 -8.767953029174267 24.999691333373253 1.0258577624224354 0.8945115077702072 0.16809210730890822 0.09387402047151103 142.4506718077364 546730.9554834844 0.016136189520883786 0.017375128229967073 1.7062669191678127e-09 8.767953029174267 -0.13134625465222827 SRLNS(ph)HGGR ddPTM_A549_PD325901_60min_R1 1 SRLNSHGGR 9 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IU26;B1AN86 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.001)RLNS(0.999)HGGR 51.286 0.007350499999999999 9492200.0 1300.3 1152.4 819.6 932.53 1144.0 1003.6 889.33 1011.3 1244.2 1496.7 1565.9 True False 1432.3054987697328 1249.516792348152 875.2229846551777 990.1302601707079 1063.649386585748 995.4270143425198 923.1739398100491 991.1288281504977 1191.9106008220488 1402.1981065715804 1373.3042270579529 1.0429630016053901 0.9098616080320437 0.6373117969134771 0.7209839165003348 0.7745183955811581 0.7248408580777733 0.6722282809744031 0.721711044517649 0.8679144630432647 1.021039678568184 1.0 10.423435544705635 -9.439908729103747 1.1400230389560604 0.9697291931554154 0.7708982012542798 0.3726500692012027 0.11155705599373389 0.3414610099500543 0.9241355326601292 0.03007520764149095 0.02328266218252359 3.6315436691143954e-10 9.439908729103747 -0.19883099190113562 SRLRIHQK ddPTM_A549_MK2206_60min_R1 1 SRLRIHQK 8 2 Q5JVG2-2;Q5JVG2;Q5JVG2-3 Q5JVG2-2 ZNF484 Zinc finger protein 484 0 40.045 0.034217000000000004 12266000.0 1262.6 937.47 1010.4 810.56 1061.1 1088.5 1028.9 972.76 876.28 1112.5 1227.0 False True 1475.6960123937204 985.1832187418806 1153.6899132709339 1009.1472363874209 905.0135956306704 1203.684347512178 1215.837811702678 1110.6517089525594 677.8039791316172 861.1854773351938 922.3020365227521 1.6000138283954843 1.0681785139022375 1.2508808043193274 1.0941613445765457 0.9812551201152473 1.3050869453246452 1.318264260032006 1.2042169104818634 0.7349045673660903 0.9337347671723908 1.0 9.84909547322365 -8.744004049949291 23.824805558014404 0.8748160699147394 1.2161334752029422 0.45429228588535375 0.16451314589316327 91.28391009545275 124736.12394636386 0.029043648198545373 0.03288784346098374 1.8030009271613098e-09 8.744004049949291 0.34131740528820287 SRLS(ph)LRR ddPTM_A549_MK2206_60min_R1 1 SRLSLRR 7 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.021)RLS(0.979)LRR 42.19 0.032898000000000004 447960000.0 2125.7 1817.2 1684.6 1318.8 2454.2 1917.7 1455.7 2004.4 3019.0 2439.8 2607.1 True False 2484.4661916246896 1909.6877181112418 1923.5016111403565 1641.9060592031808 2093.1904310590826 2120.6297411337646 1720.1818471139943 2288.5298382175547 2335.201320352344 1888.6474854853082 1959.6851177004614 1.267788467230908 0.9744870238909158 0.9815360609552602 0.8378417758919506 1.068125900509608 1.0821277979710124 0.8777848193961356 1.1678048771952543 1.1916206839864771 0.9637504864564618 1.0 10.936406145315402 -8.290110804868764 24.996764617309353 1.098814668898844 1.0081997342025013 0.05860627101537297 0.12273381928850967 1255.888984183522 1094924.99082207 0.020336693691574165 0.024588289197972134 5.127305504396864e-09 8.290110804868764 -0.09061493469634274 SRLS(ph)LRR ddPTM_A549_PD325901_60min_R1 2 SRLSLRR 7 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)RLS(0.998)LRR;S(0.008)RLS(0.992)LRR 45.598 0.022846 70297000.0 3422.8999999999996 3551.2 3326.2 3875.5 3823.3 2761.5 3509.8999999999996 3566.2999999999997 3912.8 4403.2 4184.5 True False 3770.3902881942017 3850.472086937482 3551.9359340654614 4114.880833100895 3554.764597668961 2739.0112595724054 3643.471165190978 3495.167348791773 3748.35862312853 4125.181200545188 3669.8330277310224 1.027401045143831 1.049222691561568 0.9678739896952603 1.1212719494339054 0.9686447777889214 0.7463585506139161 0.9928166043684163 0.9524050065440602 1.0213975935155988 1.12407871676268 1.0 11.841498708617655 SRLS(ph)PAGEMKPMPLSEGK ddPTM_A549_MK2206_60min_R1 1 SRLSPAGEMKPMPLSEGK 18 2 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.421)RLS(0.579)PAGEMKPMPLSEGK 72.145 0.00017051 4979000.0 1513.0 1762.7 1490.1 1875.5 2258.3 1984.9 1558.4 1679.5 2821.2 1943.3 1940.4 True False 1768.3574107014892 1852.4139008995617 1701.4185864657745 2334.997584194394 1926.1070615519209 2194.9408005300156 1841.541107743662 1917.5742682530342 2182.202704530649 1504.307180319535 1458.5451276843917 1.2124118596926516 1.2700422261466 1.1665176168851028 1.6009086999601252 1.3205673413820507 1.5048837083393758 1.2625876791809112 1.3147171327481681 1.4961502822988735 1.0313751366115054 1.0 10.510314308868201 -10.92711366503571 1.148208149313298 0.9973055610429713 1.3620621362539513 0.5020348674680143 0.1277091540494552 0.3212145846744523 0.743219554540666 0.09405671521496843 0.02149376402569416 1.1827319665620928e-11 10.92711366503571 0.36475657521098004 SRLS(ph)SSS(ph)SNDSGNK ddPTM_A549_MK2206_60min_R1 1 SRLSSSSSNDSGNK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 S(0.429)RLS(0.452)S(0.213)S(0.214)S(0.587)S(0.104)NDS(0.001)GNK 47.09 0.0094078 2421100.0 824.4 1122.1 1228.7 1137.0 1469.4 930.14 985.94 1148.2 1311.0 1567.8 1483.1 True False 963.5385653551272 1179.2100971233892 1402.9481358234325 1415.56505104187 1253.2532065024093 1028.566797423038 1165.072535785925 1310.960866215026 1014.0605932368082 1213.6328911156113 1114.805338522325 0.8643110434260192 1.0577722014557562 1.2584691581070475 1.2697867530112497 1.1241901731145252 0.9226425115495085 1.0450905602320038 1.1759549590538427 0.9096301912053507 1.088650053222998 1.0 10.122576100936614 -8.326851828731277 0.9544501513991697 0.9606625523941804 1.1066679994673458 0.0 0.1307540471029249 0.6595394123870232 1.1801224660674499 0.02746161086905979 0.03538088115183235 4.711380404212471e-09 8.326851828731277 0.14600544707316543 SRLS(ph)SSS(ph)SNDSGNK ddPTM_A549_PD325901_60min_R1 2 SRLSSSSSNDSGNK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 S(0.086)RLS(0.47)S(0.335)S(0.297)S(0.525)S(0.062)NDS(0.226)GNK;S(0.032)RLS(0.734)S(0.242)S(0.269)S(0.609)S(0.092)NDS(0.022)GNK 72.898 0.0038092 10226600.0 2858.0 2493.8 2822.8 2788.0 3309.5 2874.3999999999996 3315.8999999999996 2400.61 1856.8600000000001 2534.7 2377.16 True False 3148.142056051601 2703.9612779918616 3014.3721828753473 2960.208427992594 3077.0521371551863 2850.9918394042816 3442.0883890301043 2352.7279503078876 1778.8226316045907 2374.6586094253903 2084.784390058807 1.510056421692029 1.2969980449228082 1.445891573847749 1.4199110671147597 1.4759570111077003 1.367523592846866 1.6510524567641314 1.1285233914484187 0.8532405749423394 1.139042780993965 1.0 11.025682471460387 -8.484942630347135 4.897882392584924 0.932407454731941 1.4416942031011122 0.7749435551722507 0.10925717153586163 0.0492895704891481 2.861645571179936 0.0153934248549497 0.018337583269933917 3.2738393895224437e-09 8.484942630347135 0.5092867483691712 SRLS(ph)SSSSNDSGNK ddPTM_A549_PD325901_60min_R1 1 SRLSSSSSNDSGNK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.001)RLS(0.967)S(0.026)S(0.004)S(0.001)S(0.001)NDSGNK 96.414 1.6002e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SRLT(ph)PVSPES(ph)SSTEEK ddPTM_A549_MK2206_60min_R1 4 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 2 S(0.001)RLT(0.999)PVS(0.422)PES(0.477)S(0.068)S(0.03)T(0.004)EEK;SRLT(1)PVS(0.001)PES(0.923)S(0.069)S(0.006)T(0.001)EEK;S(0.033)RLT(0.967)PVS(0.014)PES(0.518)S(0.107)S(0.298)T(0.063)EEK;S(0.002)RLT(0.998)PVS(0.041)PES(0.891)S(0.063)S(0.005)TEEK 202.96 3.0454e-39 724020000.0 36128.0 33527.7 32336.9 28023.500000000004 44089.8 32643.8 35163.5 35343.7 50845.4 49950.9 50398.9 True False 42225.52315520383 35234.11672161471 36922.75866632115 34889.25875802274 37604.248825404895 36098.14524879927 41552.25278628354 40353.7777105417 39328.99808341935 38666.95699759328 37883.462191121864 1.114616265593052 0.9300659096008379 0.9746405563474116 0.9209627827046698 0.9926296766565754 0.95287344822615 1.0968441209690036 1.0652082828902254 1.0381574388582744 1.020681710729571 1.0 15.209280565100004 -7.714621286401288 24.99860848943023 1.0281411453773348 0.9761665786378986 0.2273400550767557 0.05410342221776404 161.85737071630678 86423.56414086802 0.0080717763543598 0.011972361799473566 1.9292064870954818e-08 7.714621286401288 -0.051974566739436234 SRLT(ph)PVSPES(ph)SSTEEK ddPTM_A549_PD325901_60min_R1 4 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 2 S(0.031)RLT(0.969)PVS(0.092)PES(0.738)S(0.042)S(0.103)T(0.025)EEK;S(0.007)RLT(0.993)PVS(0.028)PES(0.575)S(0.371)S(0.024)T(0.002)EEK;S(0.033)RLT(0.967)PVS(0.093)PES(0.733)S(0.048)S(0.112)T(0.016)EEK;S(0.156)RLT(0.844)PVS(0.096)PES(0.856)S(0.044)S(0.004)TEEK 231.86 4.606199999999999e-55 1128850000.0 49345.0 47859.7 51335.2 49324.0 55142.200000000004 53795.6 53577.299999999996 53242.8 53664.4 56342.0 60803.0 True False 54354.46807413094 51893.00488263173 54819.11537563502 52370.63145706841 51269.20210226281 53357.506469474356 55616.21347012352 52180.83058583142 51409.071890977975 52784.55650461415 53324.61646197378 1.0193128742499546 0.9731528949605677 1.0280264353092343 0.9821098571691431 0.9614546808568852 1.000616788449365 1.0429744677073092 0.9785505090888369 0.9640776680998391 0.9898722205016748 1.0 15.702514063548989 SRLT(ph)PVSPESSSTEEK ddPTM_A549_MK2206_60min_R1 4 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.031)RLT(0.968)PVS(0.001)PESSSTEEK;SRLT(0.997)PVS(0.003)PESSSTEEK;S(0.033)RLT(0.967)PVSPESSSTEEK;SRLT(1)PVSPESSSTEEK 250.26 9.833799999999998e-77 5360023000.0 39438.8 38467.700000000004 36894.4 33820.2 50095.4 40406.5 39838.1 42221.0 60620.4 59373.3 60415.0 True False 46095.10525391533 40425.541621168726 42126.580696935016 42106.150518246446 42726.43302097512 44682.28901033608 47076.16709728104 48205.956046389656 46889.976190886795 45960.830293452316 45412.28813082482 1.015035955050832 0.890189490225858 0.9276471728439611 0.9271972906748506 0.9408562038954694 0.9839250751165468 1.0366393994872682 1.061517884928343 1.0325393879252465 1.012079157100546 1.0 15.470795109371132 -7.436802520808023 2.874608675975793 1.021285247131451 0.9356698799255673 0.6312421103762338 0.03182176694211113 0.13826093036428586 2.2269078818917407 0.004914743481539372 0.008073072663953601 3.6576106998888925e-08 7.436802520808023 -0.08561536720588381 SRLT(ph)PVSPESSSTEEK ddPTM_A549_PD325901_60min_R1 7 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.01)RLT(0.99)PVSPESSSTEEK;SRLT(0.986)PVS(0.013)PES(0.001)SSTEEK;S(0.005)RLT(0.994)PVS(0.001)PESSSTEEK;SRLT(0.976)PVS(0.024)PESSSTEEK;S(0.006)RLT(0.994)PVSPESSSTEEK;S(0.088)RLT(0.91)PVS(0.002)PESSSTEEK;S(0.316)RLT(0.68)PVS(0.004)PESSSTEEK 261.76 1.4328999999999996e-90 8062897000.0 85983.20000000001 84306.0 87047.5 86179.4 95174.9 86757.00000000001 87583.4 91326.09999999999 93288.9 91306.59999999999 94681.3 True False 94712.15116651374 91410.76249193272 92955.06680914052 91502.50581038202 88490.14335958046 86050.47975619163 90916.43421447561 89504.52929156035 89368.29195388852 85541.48569351809 83036.1003342118 1.14061415198097 1.100855677518739 1.1194536645507904 1.1019605381526083 1.0656827934286013 1.0363020350166645 1.0949025044353753 1.0778989973194042 1.076258297224825 1.0301722425453792 1.0 16.34145107082953 -14.999999999999865 0.08596785419645231 0.702712548993588 1.1726079670161742 0.6975877914892721 0.021788685251411224 52.35020790745507 0.3302036824276257 2.915388294092781 0.2559641063686004 1.0000000000003109e-15 14.999999999999865 0.46989541802258616 SRLTPVS(ph)PESSSTEEK ddPTM_A549_PD325901_60min_R1 1 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.07)RLT(0.02)PVS(0.908)PES(0.002)SSTEEK 155.86 9.305e-21 30599000.0 3958.6 4483.2 4122.6 4887.6 4927.3 6003.1 5256.6 6596.1 4971.1 5705.2 5578.3 True False 4360.474157832705 4861.014997791768 4402.384427207706 5189.495951455025 4581.223446262204 5954.212743921459 5456.642789521895 6464.535610959656 4762.1819544659165 5344.972698344473 4892.204463757191 0.8913106944193172 0.9936246601718136 0.8998774396740349 1.0607684102126662 0.936433356414512 1.2170817446474123 1.1153750481906919 1.3213952235338344 0.9734225112105357 1.0925489189876498 1.0 12.25626898547839 -6.2652348054977764 24.841387682390312 1.0368759279010114 0.9348063027975351 0.19149605324718266 0.11493246522733047 498.02359266397167 3259619.926991068 0.0173886251953077 0.04191161990927294 5.429566973495758e-07 6.2652348054977764 -0.10206962510347628 SRNEVVT(ph)PEK ddPTM_A549_MK2206_60min_R1 3 SRNEVVTPEK 10 1 A0A494C142;Q99728-3;Q99728-2;Q99728;A0A087X2H0 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 S(0.001)RNEVVT(0.999)PEK;SRNEVVT(1)PEK;S(0.003)RNEVVT(0.997)PEK 82.069 0.00042503 88998600.0 7323.1 6918.5 6649.1 5727.900000000001 9000.3 6199.0 5651.0 6982.599999999999 8694.9 9776.7 10260.7 True False 8559.060247394624 7270.622098697236 7592.042361767383 7131.235757135206 7676.3677926253185 6854.974065436831 6677.713552271199 7972.404933315655 6725.519032902152 7568.136679786963 7712.685009086387 1.109738079191762 0.9426836555793018 0.9843578925916365 0.9246113057558852 0.9952912356179096 0.8887921725522202 0.8658091889405727 1.033674384980495 0.8720074818275029 0.981258364742093 1.0 12.913017476183803 SRNPS(ph)KSHLR ddPTM_A549_PD325901_60min_R1 1 SRNPSKSHLR 10 2 Q92615 Q92615 LARP4B La-related protein 4B 1 S(0.01)RNPS(0.886)KS(0.104)HLR 40.113 0.021126 2620800.0 484.85 386.68 443.51 535.57 521.72 612.38 383.37 518.06 330.61 339.75 724.21 True False 534.0716150722947 419.266880653578 473.60925564228626 568.6509425322788 485.07618703629055 607.3929803139417 397.9593551381135 507.72688688979224 316.71561142724454 318.2981270179021 635.1367611454375 0.8408765603633509 0.6601206327554574 0.7456807488014953 0.8953204684716173 0.7637350200946955 0.956318414349909 0.6265726997448764 0.7993977328191996 0.49865734563381864 0.5011489595467082 1.0 9.310923464151536 -11.172328770440895 1.588636090178815 0.999475475305042 0.7203582185195664 0.0 0.1923599016764278 0.3577926135772915 1.6263863366503388 0.10291083056962459 0.021927659698096576 6.724673909932184e-12 11.172328770440895 -0.2791172567854756 SRNS(ph)PLLER ddPTM_A549_MK2206_60min_R1 6 SRNSPLLER 9 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.02)RNS(0.98)PLLER;S(0.03)RNS(0.97)PLLER;S(0.001)RNS(0.999)PLLER;S(0.003)RNS(0.997)PLLER;S(0.015)RNS(0.985)PLLER;S(0.013)RNS(0.987)PLLER 141.34 1.1054000000000001e-05 1510986000.0 15486.3 16546.800000000003 14748.890000000001 13502.97 20360.899999999998 15914.0 15832.699999999999 14979.5 23325.1 21998.7 23393.9 True False 18100.008836316225 17388.961442902855 16840.50437939682 16811.198256171356 17365.838581921136 17598.00891714176 18709.296648211668 17102.889997794777 18042.002092530794 17029.178391239308 17584.54899120587 1.0293132252279056 0.9888773065262676 0.9576875919774145 0.9560210082487034 0.9875623532116683 1.0007654404979407 1.0639622692380846 0.9726089651971186 1.0260144915603864 0.9684171257252998 1.0 14.102020712721666 -7.320538563731475 3.90423897595724 1.0131193099645157 0.9809521259954553 0.08427171715196047 0.030483284148446664 0.26399717962934266 8.1873258199104 0.004084594871797775 0.006767702832512032 4.780369163678183e-08 7.320538563731475 -0.032167183969060376 SRNS(ph)PLLER ddPTM_A549_PD325901_60min_R1 5 SRNSPLLER 9 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.007)RNS(0.993)PLLER;S(0.371)RNS(0.629)PLLER;S(0.01)RNS(0.99)PLLER;S(0.009)RNS(0.991)PLLER;S(0.077)RNS(0.923)PLLER 131.79 1.3493e-05 1913826000.0 7899.0 8503.599999999999 8113.299999999999 8655.6 9752.7 8214.9 8490.2 8432.2 9029.900000000001 9864.0 9502.6 True False 8700.900665063537 9220.228215386795 8663.917327236277 9190.236753706135 9067.703996988488 8148.000578041409 8813.29920701571 8264.013156067069 8650.404705323119 9241.185356599231 8333.84044194451 1.0440445465300245 1.1063600604807675 1.0396068160401148 1.1027613040743318 1.0880582679925592 0.9777005733193832 1.0575315508391627 0.9916212355679384 1.0379854000786155 1.1088747643988985 1.0 13.024765763413972 -7.243546046352049 24.880816381973073 1.0169468758993314 1.0772900683104432 0.23300947831002317 0.039478907205626995 459.9810255342562 639607.2773209584 0.003923577174028852 0.006784472412810823 5.707605577080748e-08 7.243546046352049 0.060343192411111746 SRNT(ph)DEMVELR ddPTM_A549_MK2206_60min_R1 2 SRNTDEMVELR 11 1 P61978-3;P61978;P61978-2;Q5T6W2;S4R457 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 S(0.441)RNT(0.559)DEMVELR;S(0.156)RNT(0.844)DEMVELR 115.91 7.9806e-06 16758900.0 871.91 892.0999999999999 877.22 1134.4 1377.1399999999999 607.5699999999999 862.64 943.8600000000001 1147.23 1501.22 1163.6100000000001 True False 1019.067091847148 937.5040795328185 1001.6229866582825 1412.328050925152 1174.564530286327 671.8626541276742 1019.3705218069762 1077.6550454500214 887.3842367498573 1162.0933593574289 874.6535229977499 1.1651094576906766 1.0718576612138455 1.1451654401680826 1.6147285911392657 1.3428912128092447 0.7681471993904067 1.1654563721566336 1.2320936429279024 1.0145551506023491 1.328632800076675 1.0 9.772567824268375 -7.228092094604016 24.982870659298523 1.0240965103979214 1.2695005067368312 0.14400512276433075 0.19356877950752913 600.3284993058147 449749.95244361775 0.025626993167380006 0.04438555530240184 5.914362034809306e-08 7.228092094604016 0.24540399633890986 SRNT(ph)DEMVELR ddPTM_A549_PD325901_60min_R1 2 SRNTDEMVELR 11 1 P61978-3;P61978;P61978-2;Q5T6W2;S4R457 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 S(0.15)RNT(0.85)DEMVELR;S(0.15)RNT(0.85)DEMVELR 128.76 4.3211e-08 15716800.0 599.51 611.23 651.69 633.98 717.61 599.5699999999999 563.4200000000001 642.0999999999999 770.7 629.62 823.3 True False 660.3718138640638 662.7404972118715 695.9176023303229 673.1395047269533 667.2075492201037 594.6873007068002 584.861256415254 629.2928117822948 738.310159181445 589.8656857483784 722.0393193287011 0.9145925937634931 0.9178731399670016 0.9638223067648667 0.9322754131351029 0.9240598556882249 0.8236217679387552 0.8100130294275593 0.8715492286034573 1.022534562062176 0.8169439945414496 1.0 9.495933592338655 -8.7648688852938 24.999419372348914 1.0106413279405018 0.8948362470003098 0.0 0.07293703160814777 49.32166943690454 359530.1923643749 0.008516143492556744 0.009247335381102105 1.7184271067522848e-09 8.7648688852938 -0.11580508094019193 SRPALS(ph)PLGDIDFCPPNPGPDGPR ddPTM_A549_MK2206_60min_R1 2 SRPALSPLGDIDFCPPNPGPDGPR 24 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 S(0.15)RPALS(0.85)PLGDIDFCPPNPGPDGPR;S(0.182)RPALS(0.818)PLGDIDFCPPNPGPDGPR 72.218 2.0421e-05 5720600.0 1644.91 2260.1 1949.56 1676.0900000000001 3213.4 2512.8 2593.3999999999996 2558.5 3329.8999999999996 2413.1 3082.7 True False 1922.5305938116228 2375.1294363323873 2226.0369233140163 2086.7321252425386 2740.713116765241 2778.702828138354 3064.587210486662 2921.1752100776353 2575.6829667576235 1867.979034029265 2317.1805118082216 0.8296852938364168 1.025008377305463 0.9606661682032355 0.9005479351343881 1.1827792883630435 1.1991740885003308 1.322550053769958 1.2606593207527383 1.1115590492980965 0.8061430797083563 1.0 11.17815472133206 -6.75404945894528 24.998726810677294 1.109344897439322 0.9380998263510554 0.318319309600404 0.13715723185023745 171.40775328340288 579835.1448176017 0.01816078404147147 0.0372138229865231 1.761775397961163e-07 6.75404945894528 -0.1712450710882667 SRPALS(ph)PLGDIDFCPPNPGPDGPR ddPTM_A549_PD325901_60min_R1 2 SRPALSPLGDIDFCPPNPGPDGPR 24 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 S(0.113)RPALS(0.887)PLGDIDFCPPNPGPDGPR;S(0.18)RPALS(0.82)PLGDIDFCPPNPGPDGPR 98.991 9.674299999999999e-09 9699700.0 2678.1 2381.05 2735.4 2581.8 2665.8 2351.7 2826.7 3115.5 3061.4 3560.7 2842.8 True False 2949.978740486981 2581.709439795701 2921.0406932964534 2741.2719223067734 2478.563404510741 2332.5485349036508 2934.2716153295914 3053.3589084375294 2932.7400043052744 3335.876794327138 2493.153621993965 1.1832318371651958 1.0355195993622373 1.1716248319107887 1.099519860358372 0.9941478866947817 0.9355815519454971 1.1769317339469965 1.2246974600768987 1.176317407171941 1.3380149401540622 1.0 11.2837560655503 -11.02858636055711 1.3696984392403468 1.0009928536575443 1.1146614787373548 0.0 0.13179852137486492 0.6144669010316834 2.0829678323379714 0.06279552812232436 0.01467883200718089 9.36297016349545e-12 11.02858636055711 0.11366862507981046 SRPDS(ph)PR ddPTM_A549_MK2206_60min_R1 3 SRPDSPR 7 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(0.004)RPDS(0.996)PR;S(0.011)RPDS(0.989)PR;S(0.24)RPDS(0.76)PR 61.765 0.023081 139143000.0 4834.799999999999 3967.76 3254.15 2508.67 3282.79 3176.86 2511.5699999999997 3316.2299999999996 3717.7299999999996 5907.2 6642.0 True False 5650.7960404888 4169.702036326798 3715.6374022868267 3123.2942626184754 2799.8959396856167 3513.0332165710015 2967.889758711338 3786.315758028438 2875.6700909948727 4572.759417271424 4992.608090125605 1.1318324888478553 0.8351751151013932 0.744227733323516 0.6255837041957562 0.5608082767848851 0.7036469022111087 0.594456785939445 0.7583843333341194 0.5759855448462662 0.9159059422900512 1.0 12.285577947063453 -3.6917329555506098 21.078148629669 0.7654760099637529 49.4474515766828 0.0 0.17777495237125712 0.0 0.0 0.026521555897022472 0.0 0.00020336070764470548 3.6917329555506098 48.681975566719046 SRPDS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SRPDSPR 7 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(0.017)RPDS(0.983)PR;S(0.283)RPDS(0.717)PR 58.699 0.0089529 170291000.0 3907.1000000000004 4460.0 2849.3999999999996 2555.5 3856.7999999999997 2527.3999999999996 2702.5 3011.6 3548.6000000000004 4235.7 4224.0 True False 4303.7459157449985 4835.859852371359 3042.7774188341423 2713.347431038407 3585.911673237685 2506.817692356799 2805.345116364745 2951.5312754455053 3399.4646825889117 3968.2571791309133 3704.4747781421534 1.1617695283387481 1.3054103866234477 0.8213789001311917 0.7324513172685682 0.9679946248779889 0.6766998947186795 0.7572855220711384 0.7967475694154247 0.91766441565403 1.07120642379459 1.0 11.855053295834729 -5.761242876765854 24.999999999278224 0.8951135247703151 1.2335900289050004 0.5661815215261643 0.12300009469325475 2.9668983376574545 377165.6279913423 0.01791333025138211 0.061673846173047775 1.7328346486189827e-06 5.761242876765854 0.3384765041346852 SRPDS(ph)PRVK ddPTM_A549_PD325901_60min_R1 1 SRPDSPRVK 9 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(0.02)RPDS(0.98)PRVK 56.086999999999996 0.0053556 11293000.0 2619.2 2744.4 2956.6 3193.4 3189.0 4035.5 3852.5 3719.7 3331.4 3338.8 3743.6 True False 2885.0992558468697 2975.680219472637 3157.252655480111 3390.649065262395 2965.015641452756 4002.636225965763 3999.10899566889 3645.507665451802 3191.392843255566 3127.9875981968266 3283.160932635645 0.8787565748508037 0.906346134267573 0.961650287713902 1.0327392213882312 0.9030978688798269 1.2191410375831135 1.218066697832719 1.1103652060471105 0.9720488604539985 0.9527366042595271 1.0 11.68086975373987 -5.893269666494249 1.3891139128495937 1.0264343640229108 0.8720358429667402 0.2697364420983761 0.09777172297286175 0.7020190342561454 2.2381721414830147 0.015799551900663157 0.10897811006696921 1.2785871444450308e-06 5.893269666494249 -0.15439852105617058 SRPET(ph)GRPRPK ddPTM_A549_PD325901_60min_R1 1 SRPETGRPRPK 11 3 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 S(0.003)RPET(0.997)GRPRPK 67.997 0.0019219999999999999 23081000.0 996.4 859.06 799.94 758.73 1021.4 871.93 1137.7 927.85 970.47 924.53 1041.2 True False 1097.553794489089 931.4560010713326 854.2287388299939 805.5950288991468 949.6603876387093 864.8292911674703 1180.9957960733286 909.3433038657565 929.6845208003335 866.1550180187234 913.1390007106085 1.2019569787677102 1.0200593779769234 0.9354859864327661 0.8822260666472788 1.0399954299396694 0.9470949006607501 1.2933362775593562 0.9958432430967267 1.0181193882605488 0.948546735321433 1.0 9.834690677993025 -5.264209890114382 5.989609601391656 1.0117323316523323 1.206887249613192 0.23452993651493304 0.10058748888326426 0.13842448818977 23.778410358905084 0.012816192846196272 0.10990663310464158 5.442395638170458e-06 5.264209890114382 0.1951549179608596 SRPET(ph)PKQK ddPTM_A549_MK2206_60min_R1 2 SRPETPKQK 9 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(0.012)RPET(0.988)PKQK;S(0.337)RPET(0.663)PKQK 41.242 0.031242000000000002 34243700.0 4537.799999999999 5424.8 5159.8 4993.0 5565.299999999999 4143.8 4089.3 4234.6 6606.6 7888.6 7253.6 True False 5303.66970144165 5700.8991488057745 5891.53722733112 6216.285224144289 4746.651742308332 4582.294165568178 4832.272877243429 4834.867517918608 5110.215648572309 6106.5597811293555 5452.330930824317 0.9727343715433299 1.0455893490573356 1.0805538589053327 1.1401151733107426 0.8705729352328041 0.8404284742994128 0.8862765188966357 0.8867523962247177 0.9372533900468355 1.1199906716238386 1.0 12.412657414261167 -6.7641821171931555 24.99987819693086 0.9410790282725975 1.0602229588607055 0.35760506126290137 0.08046262803250957 57.42643002248797 523445.464575754 0.010307554783765067 0.020119697444094156 1.7211466774133942e-07 6.7641821171931555 0.11914393058810802 SRPET(ph)PKQK ddPTM_A549_PD325901_60min_R1 1 SRPETPKQK 9 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(0.001)RPET(0.999)PKQK 84.479 0.00046632 59615000.0 7385.0 7041.8 6435.8 7243.9 8850.4 7932.8 7155.1 8371.8 8383.7 7865.6 8791.0 True False 8134.719763450338 7635.23719919925 6872.572089609316 7691.339250909453 8228.77843622247 7868.197906911456 7427.391245920953 8204.817881449948 8031.362244102092 7368.96467364831 7709.762730740447 1.0551193399267007 0.9903336154244996 0.8914116205167929 0.9976103700626822 1.0673192838234304 1.0205499418988984 0.9633748151945559 1.064211463828272 1.0417132828328632 0.9557965570414634 1.0 12.912470746300277 -6.523854067282745 24.999883346012734 1.022412435891174 0.9741624443969321 0.09045187976334246 0.04883034927948051 40.723455363410196 1043849.012890622 0.0063055330798005935 0.01321354655512362 2.993270273798944e-07 6.523854067282745 -0.048249991494241806 SRPETGRPR ddPTM_A549_PD325901_60min_R1 1 SRPETGRPR 9 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 38.567 0.058103999999999996 7971600.0 1526.0 1473.1 1370.6 1306.4 1735.6 1294.0 910.66 1221.1 1470.7 1812.7 1780.3 False True 1680.918396618175 1597.243306844899 1463.6171580873436 1387.093360950333 1613.6974434949525 1283.462093024333 945.3156646322733 1196.7442025655812 1408.8915934970169 1698.2458126426832 1561.3343862515321 1.0765909028966827 1.022998866168302 0.9374142854825679 0.8884024928705254 1.0335373752762431 0.8220289672257088 0.6054536894571296 0.7664880842333442 0.9023637767176181 1.0876887280500172 1.0 10.608563832691685 -5.622007964025705 1.5636495018858367 0.9065684041234785 1.094124921807713 0.18796776005596272 0.12633574667072234 0.8676450705173131 3.125807678182919 0.01901822036255846 0.20150100156893913 2.387767495997003e-06 5.622007964025705 0.18755651768423443 SRPETGRPRPK ddPTM_A549_PD325901_60min_R1 1 SRPETGRPRPK 11 3 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435;A0A2R8Y6L3;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 39.918 0.057259000000000004 5987900.0 1171.9 1236.8 1266.0 1001.7 1387.3 1315.7 1142.6 1401.9 1364.3 1722.8 1650.3 False True 1290.870425292817 1341.029476549977 1351.9183730764462 1063.57273397424 1289.8608339251825 1304.9853754189448 1186.0822682547114 1373.9380047307254 1306.9632154810492 1614.022113985113 1447.3235621136341 0.89190175513184 0.926558173758722 0.934081644537134 0.7348548464318688 0.8912041976581262 0.9016542047537579 0.819500420847559 0.9492956797609663 0.9030207547871284 1.1151771146653873 1.0 10.499171769955396 -10.177079542130688 0.48756911305841083 1.0104305389969461 0.874656042659983 0.46656390737650166 0.06678082037980809 0.9344508322116017 0.39134737995460084 0.05720754034269325 0.015219956908934155 6.651513209013381e-11 10.177079542130688 -0.13577449633696315 SRPFTVAASFQSTSVKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SRPFTVAASFQSTSVKSPK 19 2 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SRPFTVAASFQS(0.001)T(0.013)S(0.013)VKS(0.974)PK;SRPFTVAASFQS(0.002)T(0.003)S(0.007)VKS(0.988)PK 107.88 2.2962e-10 25261000.0 7159.1 7534.700000000001 7821.9 8074.7 10698.9 9575.099999999999 7463.5 9426.8 12172.9 10703.6 9748.5 True False 7885.886561749131 8169.675612031951 8352.74117090573 8573.455880025755 9947.446173201279 9497.12356021429 7747.527576683908 9238.775078818466 11661.315345400033 10027.772869312194 8549.496300833043 0.9223802530893835 0.95557391038767 0.9769863483176031 1.002802455062806 1.1635125419297534 1.1108401274223503 0.9061969622618594 1.080622150560877 1.363976886482047 1.1729080306561581 1.0 13.061623709842332 -6.549900344089686 0.6234090489500324 1.1557615974458828 0.9040108756187478 0.2830940561309264 0.11014111758493725 1.3191068036305587 0.7703456420147067 0.02893930265117874 0.17697312075932903 2.819029729130227e-07 6.549900344089686 -0.251750721827135 SRPNS(ph)GDEKR ddPTM_A549_MK2206_60min_R1 1 SRPNSGDEKR 10 2 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 S(0.17)RPNS(0.83)GDEKR 40.066 0.021228999999999998 2590900.0 619.84 575.6 469.76 495.13 246.8 297.47 204.0 108.69 266.55 1217.5 1059.0 True False 724.4538383669604 604.8955814136203 536.3790317281808 616.4368722272307 210.4960469339831 328.94807795539504 241.06415938122876 124.09714034916487 206.1768505928842 942.4659044095274 796.021073086874 0.9100937938208288 0.7598989547700138 0.6738251660199992 0.7743976799970415 0.26443526943037415 0.41324041420131497 0.30283640412484425 0.15589680291745428 0.25900928701969556 1.1839710483477002 1.0 9.636662813553082 -6.002521901747776 1.4212115461948687 0.5423477327931099 0.863820272615306 0.1304914029157983 0.30888802477595606 0.9287399776529255 3.2569515769799837 0.05022957177309439 0.2847097469546502 9.942099340474542e-07 6.002521901747776 0.32147253982219615 SRPNS(ph)GDEKR ddPTM_A549_PD325901_60min_R1 1 SRPNSGDEKR 10 2 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 S(0.162)RPNS(0.838)GDEKR 47.18899999999999 0.011051 10407000.0 1235.6 1476.6 1290.2 1394.2 1343.4 1058.4 999.92 883.39 1134.6 1761.1 1779.4 True False 1361.0372023993555 1601.0382641281499 1377.760730602867 1480.3165675420641 1249.0442184784035 1049.7807413114012 1037.9725027772186 865.7700934439514 1086.9167076777833 1649.9038454487934 1560.545080545962 0.8721550049186608 1.0259481024207395 0.8828714708586647 0.9485894294217828 0.8003897061669126 0.6727013236580976 0.6651345838814732 0.5547869806754052 0.6964981154517637 1.0572612518643607 1.0 10.607834318651475 -6.765526641535184 23.603533814380306 0.7982428060438632 0.9355365575343186 0.20338898985462117 0.14334883574930254 81.62041658897625 471359.82916460384 0.023670360171317704 0.045965101523329416 1.715826450545338e-07 6.765526641535184 0.13729375149045542 SRPRS(ph)QYNTK ddPTM_A549_PD325901_60min_R1 3 SRPRSQYNTK 10 2 Q7Z6B7 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 S(0.008)RPRS(0.991)QYNTK;S(0.402)RPRS(0.596)QY(0.001)NTK;S(0.04)RPRS(0.96)QYNTK 90.759 0.00021511 48494000.0 6317.9 5595.04 7126.6 6480.9 7202.3 7622.2 7446.0 7257.299999999999 7527.4 6432.0 7692.1 True False 6959.2885570078415 6066.55365659459 7610.253931727174 6881.210473808183 6696.43529458613 7560.127330332356 7729.361604607541 7112.547458258288 7211.049555238626 6025.882422308011 6746.020464239407 1.031613911327273 0.8992788694836216 1.1281101164855725 1.020039964344226 0.9926497155002527 1.1206795725581506 1.145766106933831 1.0543323276236467 1.0689338393597134 0.8932499470244952 1.0 12.71982097948002 -5.75616918797504 24.999972087071402 1.0493168363536807 0.9654464228340607 0.15192935659880913 0.07423984201333407 142.23101496528713 674672.4383248686 0.008171836117099766 0.029874512557595913 1.7531973761957851e-06 5.75616918797504 -0.08387041351961999 SRPT(ph)SEGS(ph)DIESTEPQK ddPTM_A549_PD325901_60min_R1 1 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 S(0.162)RPT(0.635)S(0.202)EGS(0.519)DIES(0.421)T(0.062)EPQK 164.01 2.6258999999999996e-22 22164000.0 3547.8 3721.6 3187.4 2716.4 3875.3 2907.8 3187.8 3557.5 3317.5 4147.4 3512.3 True False 3907.9700442476815 4035.232292956337 3403.716131393256 2884.1858586079934 3603.1122970592214 2884.1198408780165 3309.113473431094 3486.5428716952374 3178.0770119170156 3885.5324562002857 3080.309366304137 1.2686940107371751 1.3100087728519134 1.104991650717588 0.9363299317134957 1.1697241635772324 0.936308499538306 1.0742795868589927 1.131880748678992 1.0317395540468663 1.261409811204218 1.0 11.588859537796303 -5.87608552333088 4.050314322864449 1.0288185161423198 1.2894875471843341 0.3824371668861857 0.09826496173956394 0.08317682872731891 2.463028927786138 0.008861624338767181 0.030671515534878555 1.3301924443741087e-06 5.87608552333088 0.26066903104201433 SRPT(ph)SEGSDIESTEPQK ddPTM_A549_MK2206_60min_R1 2 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 1 S(0.21)RPT(0.383)S(0.383)EGS(0.024)DIESTEPQK;S(0.127)RPT(0.376)S(0.376)EGS(0.122)DIESTEPQK 110.38 2.2881e-09 27395000.0 6819.6 8161.2 7269.5 7354.5 10074.400000000001 8063.0 6766.4 6552.3 10924.0 10300.6 9795.3 True False 7970.581756787754 8576.570220696383 8300.424410652276 9156.352830156045 8592.469105476986 8916.22130821377 7995.767294299742 7481.10859057717 8449.73144204339 7973.687305922607 7362.8566734729475 1.0825393064494018 1.1648427507215002 1.127337496675335 1.2435869983921788 1.167002087170067 1.2109730915090764 1.085959926818494 1.0160606028812516 1.1476159073537664 1.0829610923502522 1.0 12.846049902717164 -12.489160144121593 0.2531851935449238 0.7830265630723295 1.1630314784141358 0.2551077158144358 0.06251734524104086 8.950454999419183 0.3442111145028708 1.1201335107204806 0.03456426739565313 3.242200406336882e-13 12.489160144121593 0.38000491534180625 SRPTPQDYEMRVS(ph)PSDTTPLVSR ddPTM_A549_MK2206_60min_R1 2 SRPTPQDYEMRVSPSDTTPLVSR 23 2 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 SRPTPQDYEMRVS(0.972)PS(0.008)DT(0.009)T(0.01)PLVS(0.001)R;SRPTPQDYEMRVS(0.983)PS(0.012)DT(0.004)T(0.001)PLVSR 82.089 1.4917e-05 19218800.0 2659.5 3523.6000000000004 3032.1 3310.3999999999996 3948.4 3302.4 2702.8999999999996 2771.3 4540.4 4366.9 5411.7 True False 3108.358581467688 3702.9361894875456 3462.0973733460023 4121.448148609502 3367.595590413854 3651.8577760442963 3193.9819430957036 3164.140261750307 3512.0066495289093 3380.414257056234 4067.8255346782184 0.7641327178289548 0.9102986738049627 0.8510928858260064 1.013182132191794 0.8278613627121165 0.8977419864525171 0.7851816445585001 0.7778456167247113 0.8633621623122839 0.8310125958545168 1.0 11.990042089311762 -10.424485868412637 0.904776089928316 0.9951873895036054 0.8584457195347971 0.0 0.08306167654479915 0.4527412287625736 0.6997352832229998 0.03704484078900561 0.012617815917001856 3.7628259599658995e-11 10.424485868412637 -0.13674166996880832 SRPTPQDYEMRVS(ph)PSDTTPLVSR ddPTM_A549_PD325901_60min_R1 6 SRPTPQDYEMRVSPSDTTPLVSR 23 2 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 SRPTPQDYEMRVS(0.985)PS(0.014)DTTPLVSR;SRPTPQDYEMRVS(0.699)PS(0.294)DT(0.003)T(0.004)PLVSR;SRPTPQDYEMRVS(0.997)PS(0.003)DTTPLVSR;SRPTPQDYEMRVS(0.988)PS(0.008)DT(0.003)T(0.001)PLVSR;S(0.001)RPT(0.002)PQDYEMRVS(0.918)PS(0.029)DT(0.036)T(0.014)PLVSR;SRPTPQDY(0.001)EMRVS(0.587)PS(0.385)DT(0.012)T(0.014)PLVS(0.001)R 129.35 1.2687e-22 110891200.0 13847.0 16496.399999999998 14515.73 16428.0 16671.3 16227.600000000002 14299.6 15133.3 18392.6 16555.199999999997 19741.2 True False 15252.737246377364 17886.609522120827 15500.854727975478 17442.720249305006 15500.365400862745 16095.447805843627 14843.779103041363 14831.45445965582 17619.62298398941 15509.901846671883 17313.157549777417 0.8809910729757934 1.03312232160394 0.8953222243492356 1.0074834818059664 0.8952939610407474 0.9296656464638107 0.8573698391159271 0.8566579733947202 1.0177013022223629 0.8958447817550925 1.0 14.079581244980627 -8.789322593203355 24.98241559754219 1.008358967997633 0.9228658897125425 0.0348375034057522 0.06333535927849662 166.724259826517 149378.5379523831 0.009041406328842155 0.009626308099187067 1.6243417492329736e-09 8.789322593203355 -0.08549307828509056 SRPTPQDYEMRVSPS(ph)DTTPLVSR ddPTM_A549_MK2206_60min_R1 1 SRPTPQDYEMRVSPSDTTPLVSR 23 2 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 SRPTPQDYEMRVS(0.433)PS(0.564)DT(0.001)T(0.002)PLVSR 91.66 1.8175e-07 10734000.0 1388.4 1563.1 1639.2 1289.5 1986.8 1428.9 1513.6 1623.3 1950.9 2082.6 2335.7 True False 1622.727976879013 1642.6551134600925 1871.6632084656721 1605.4275578878546 1694.544351898045 1580.105249572944 1788.6015276442545 1853.4077461477525 1509.024264947131 1612.139213571483 1755.681227959406 0.924272556450967 0.935622644532868 1.0660609560888623 0.914418592806743 0.9651776899543324 0.8999955256168397 1.0187507271596856 1.0556630193636758 0.8595092553908779 0.9182414141576491 1.0 10.777815208926084 -8.771070983510405 24.999368392271997 0.9336571629449801 0.9713303804394243 0.10124802239676689 0.060547846738051164 485.30818303240187 1259641.199905712 0.012192552820972537 0.013059950161844615 1.6940608910652573e-09 8.771070983510405 0.03767321749444419 SRPTS(ph)EGS(ph)DIESTEPQK ddPTM_A549_MK2206_60min_R1 2 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 S(0.026)RPT(0.142)S(0.834)EGS(0.903)DIES(0.08)T(0.015)EPQK;S(0.091)RPT(0.424)S(0.524)EGS(0.926)DIES(0.031)T(0.004)EPQK 102.19 4.5709e-09 84167000.0 4999.5 5082.4 5047.5 4900.6 6970.0 5538.299999999999 4331.200000000001 5541.700000000001 8052.5 7022.200000000001 7539.599999999999 True False 5843.293373960404 5341.072451314422 5763.31139868868 6101.247219996293 5944.722233103165 6124.359229973991 5118.122976039112 6327.252945744478 6228.621607200151 5435.880142870295 5667.3092376258655 1.0310525028643507 0.9424353299542008 1.0169396369665953 1.0765686085187425 1.0489496838527048 1.0806467360760417 0.9030957658105812 1.1164474498298376 1.0990438929726427 0.9591642020839293 1.0 12.468448210140643 -5.99869262280664 24.837792521508717 1.0465959093143051 0.9849797960902008 0.06137295931223952 0.06326990505747353 59.06864290092009 1122070.771085188 0.008186053224519175 0.02515710462631803 1.0030148828817397e-06 5.99869262280664 -0.06161611322410432 SRPTS(ph)EGS(ph)DIESTEPQK ddPTM_A549_PD325901_60min_R1 1 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 S(0.007)RPT(0.147)S(0.847)EGS(0.868)DIES(0.049)T(0.083)EPQK 114.76 4.7732e-10 80032000.0 10756.0 6703.8 12055.0 8702.0 6745.9 5803.8 6221.0 6994.4 6294.2 6916.8 7901.0 True False 11847.941201851301 7268.752752988143 12873.124792603914 9239.502776324085 6272.091256091607 5756.535777043757 6457.743559261822 6854.891204999349 6029.676662670107 6480.072067571525 6929.227088565613 1.7098503267994192 1.048999067296092 1.8578009679963772 1.3334103007781077 0.9051646274433133 0.8307615991606058 0.9319572697968267 0.9892721247815748 0.8701802647830789 0.9351796361624128 1.0 12.758478722496303 -6.656873140976579 4.23182589169376 0.9305032611119968 1.5041968661596539 0.6749930117778777 0.19104609682542373 0.091511005497186 2.9499288563097417 0.02463374904812166 0.052626192204580514 2.203570040006889e-07 6.656873140976579 0.5736936050476571 SRPTS(ph)EGSDIES(ph)TEPQK ddPTM_A549_MK2206_60min_R1 2 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 S(0.022)RPT(0.189)S(0.779)EGS(0.278)DIES(0.624)T(0.108)EPQK;S(0.002)RPT(0.102)S(0.862)EGS(0.301)DIES(0.627)T(0.106)EPQK 100.77 5.5026e-08 20648000.0 2118.11 2030.6599999999999 1667.9299999999998 1447.65 2313.6 2044.5 1776.8200000000002 2173.99 3221.4 2646.8 2941.9 True False 2475.5951851823725 2134.011920349863 1904.4675544754452 1802.324314987477 1973.2725048073873 2260.8476329707382 2099.645194469388 2482.159740065149 2491.7580435187283 2048.8860417175647 2211.3450376905316 1.1194974746084023 0.9650289231112331 0.861225870235257 0.8150353220634331 0.8923403951778685 1.0223857400977578 0.9494878269481637 1.1224660547127683 1.1268065367678002 0.9265338546432199 1.0 11.110708432081367 -7.860767838841188 1.833440844165932 1.0648223662990959 0.9280826902419194 0.16270657772686814 0.09416202012772294 0.3180802449626967 2.181250905037678 0.015415303282346936 0.02284203706836936 1.3779458817086666e-08 7.860767838841188 -0.13673967605717652 SRPTS(ph)EGSDIES(ph)TEPQK ddPTM_A549_PD325901_60min_R1 2 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 S(0.017)RPT(0.147)S(0.812)EGS(0.325)DIES(0.39)T(0.309)EPQK;S(0.002)RPT(0.084)S(0.876)EGS(0.158)DIES(0.753)T(0.127)EPQK 144.17 8.9381e-16 101122000.0 18156.7 12690.0 18159.4 15468.9 13507.8 12628.9 12152.400000000001 12416.800000000001 13217.1 13520.8 14906.0 True False 19999.954817743925 13759.430835558867 19391.806085343138 16424.378820579135 12559.058727380223 12526.054425498454 12614.866232048447 12169.13718320884 12661.631250703358 12667.094380525836 13072.656496919246 1.529907469262823 1.0525351782020334 1.4833867997612489 1.2563918301111767 0.9607120580533834 0.9581873759515056 0.9649810836092355 0.9308847965275204 0.9685583992578133 0.9689763043579561 1.0 13.674264720797725 -6.693500943616255 4.448658232586707 0.9753468388329097 1.330685789067079 0.7038950599247928 0.11475968929251378 0.0830359906364089 3.1924352572189303 0.014368288210129386 0.030332259714093267 2.0253452062377808e-07 6.693500943616255 0.35533895023416917 SRPTS(ph)FADELAAR ddPTM_A549_MK2206_60min_R1 4 SRPTSFADELAAR 13 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 S(0.003)RPT(0.198)S(0.798)FADELAAR;S(0.028)RPT(0.152)S(0.82)FADELAAR;S(0.031)RPT(0.09)S(0.879)FADELAAR;S(0.007)RPT(0.108)S(0.885)FADELAAR 143.88 6.007600000000001e-13 52990000.0 6747.1 6620.540000000001 5065.5199999999995 5048.42 7819.700000000001 6021.75 5176.9800000000005 5496.679999999999 7713.29 7706.390000000001 7905.14 True False 7885.845529242575 6957.4972073873 5783.886905653386 6285.283126632182 6669.432488693957 6658.9675880858595 6117.5702540854645 6275.851222876504 5966.2421305930875 5965.5111466797 5942.075567235102 1.3271196974884527 1.170886692480197 0.9733782144316749 1.0577588681789143 1.1224078881577233 1.1206467357641385 1.0295342401597933 1.0561715602342483 1.004067023901756 1.0039440056221807 1.0 12.536751237156537 -2.0000000061421193 0.7580561330412295 1.021007697553777 60.21161367033569 0.7046589452016774 0.053269695196406876 148.77644572115224 0.5808602152847608 0.009124379910639076 15068.145328188099 0.009999999858572478 2.0000000061421193 59.19060597278191 SRPTS(ph)FADELAAR ddPTM_A549_PD325901_60min_R1 3 SRPTSFADELAAR 13 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A087WYF6 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 S(0.084)RPT(0.145)S(0.771)FADELAAR;S(0.019)RPT(0.225)S(0.756)FADELAAR;S(0.09)RPT(0.192)S(0.717)FADELAAR 113.4 1.9884e-05 29336100.0 4474.94 4338.15 5012.5 4156.47 4200.97 4100.96 3987.45 5206.89 5650.24 7072.1 7760.0 True False 4929.2326145232855 4703.741125238749 5352.678392611126 4413.205711871727 3905.9083597597282 4067.563141428954 4139.194591766363 5103.034494223815 5412.780062038884 6625.566399067866 6805.569194692969 0.7242939530123558 0.6911605760921158 0.7865144324423565 0.6484697437670864 0.5739282414181583 0.597681549487568 0.6082069659939886 0.749832137215385 0.7953456804553259 0.9735506626300309 1.0 12.732500113550765 -9.536918743010544 0.6986209056629169 0.9765286219292072 0.663068731476836 0.7811804656400888 0.06365259471572599 0.21643093885332515 0.22933428701735098 0.028419148335405313 0.017009449320207985 2.9045660512257547e-10 9.536918743010544 -0.3134598904523712 SRPTSEGS(ph)DIESTEPQK ddPTM_A549_MK2206_60min_R1 4 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 1 S(0.005)RPT(0.039)S(0.058)EGS(0.896)DIES(0.003)TEPQK;SRPT(0.004)S(0.004)EGS(0.991)DIESTEPQK;S(0.017)RPT(0.076)S(0.076)EGS(0.829)DIES(0.001)TEPQK;SRPTS(0.001)EGS(0.999)DIESTEPQK 279.19 1.7548999999999996e-115 692761000.0 13069.2 14668.699999999999 15434.7 11802.8 16814.3 14553.7 14122.599999999999 14221.2 20281.5 21391.6 19383.7 True False 15274.961448737546 15415.27417491655 17623.572549844506 14694.486529847833 14340.938743768527 16093.762874035814 16688.493614104627 16237.098650598437 15687.772632900325 16559.222702888565 14570.192327095405 1.0483706121251068 1.0580007338852757 1.2095634809892588 1.0085307180551957 0.9842655760349472 1.1045676345745352 1.1453859523233563 1.1144052381795384 1.076703195175167 1.1365136664733153 1.0 13.830732300707226 -10.336148275343268 0.8698897526797894 1.0031834124700996 1.0837818947795128 0.0 0.07120163455855208 0.6987998128508963 1.0100802436144443 0.03226224906910878 0.01161050293565318 4.611600999685775e-11 10.336148275343268 0.08059848230941324 SRPTSEGS(ph)DIESTEPQK ddPTM_A549_PD325901_60min_R1 2 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 1 SRPTSEGS(1)DIESTEPQK;SRPTSEGS(1)DIESTEPQK 271.31 2.496999999999999e-100 63684000.0 6129.7 6522.0 7186.1 6836.5 8225.3 7042.5 7357.700000000001 8353.0 8911.5 7711.200000000001 8277.4 True False 6751.9826315533555 7071.631828960987 7673.791959529743 7258.775078181986 7647.583303744537 6985.148214933437 7637.701299787928 8186.392862198263 8536.980645576032 7224.313515998372 7259.332274761803 0.9301107010940486 0.974143566006286 1.0570933619072478 0.9999232441003212 1.0534830221689326 0.9622301267595079 1.0521217393976556 1.1277060413200164 1.1760008114322267 0.995176035833877 1.0 12.825621137539791 -7.977620648600516 6.807644107925745 1.0888715972171925 1.0009838718364086 0.2701404111967908 0.0594936470363301 0.1836020071577804 32.87435661887793 0.01133821036049203 0.015558391271188873 1.0528811522508083e-08 7.977620648600516 -0.08788772538078393 SRPTSEGS(ph)DIESTEPQKQCSK ddPTM_A549_PD325901_60min_R1 1 SRPTSEGSDIESTEPQKQCSK 21 2 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 1 S(0.243)RPT(0.203)S(0.203)EGS(0.35)DIESTEPQKQCSK 55.063 0.0014964 6629400.0 1361.1 1061.6 1533.9 1486.2 1680.7 2064.4 1831.1 1485.6 1849.5 1668.8 1946.5 True False 1499.2778700111385 1151.064757685524 1637.999678090015 1577.9991985949039 1562.6534301002341 2047.5882108496394 1900.7835125163676 1455.9685425693453 1771.7719468095006 1563.431683200811 1707.092839880136 0.8782638149407332 0.674283630506204 0.9595258323531061 0.9243780781751176 0.9153886617027557 1.1994591992978023 1.1134622957295233 0.8528935911134022 1.0378884530579522 0.9158445555372301 1.0 10.737325805823557 -6.198316156460441 1.3411920921243767 1.0206225380557308 0.7807729112566689 0.34915213635840536 0.10681728513406794 0.33566809996904234 1.0789034059122236 0.014563020854015875 0.06736817750644443 6.334084365083485e-07 6.198316156460441 -0.23984962679906185 SRPVS(ph)MDAR ddPTM_A549_MK2206_60min_R1 2 SRPVSMDAR 9 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.013)RPVS(0.987)MDAR;S(0.081)RPVS(0.919)MDAR 53.236999999999995 0.018505 19810100.0 1694.31 2174.7 1924.2 1955.14 2691.8 1710.8899999999999 1681.27 2147.29 2949.6 2850.2 3237.2 True False 1980.2681060975806 2285.3829411052793 2197.080493978554 2434.1493877695702 2295.839785805899 1891.9352442031313 1986.7349962886212 2451.674933299827 2281.5203095433176 2206.3378404501314 2433.313897825144 0.8138153108267338 0.9392059705687446 0.9029170038202915 1.0003433547743976 0.9435033383312702 0.7775138447588336 0.8164729581597887 1.0075456912859018 0.9376185750562239 0.9067214231678534 1.0 11.248706724800739 -9.202369827001771 0.813378854588932 0.9861160149105824 0.8971995923882362 0.07571578583231009 0.07333938773301818 0.6308845676011695 0.8933569161635844 0.021044528376666434 0.01682745806056435 6.275237582587139e-10 9.202369827001771 -0.08891642252234622 SRPVS(ph)MDAR ddPTM_A549_PD325901_60min_R1 4 SRPVSMDAR 9 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.06)RPVS(0.94)MDAR;S(0.008)RPVS(0.992)MDAR;S(0.019)RPVS(0.981)MDAR;S(0.02)RPVS(0.98)MDAR 66.486 0.004441 85052000.0 6404.81 5574.849999999999 5713.96 6007.22 7382.66 6471.62 5740.45 6279.38 7291.6 6472.959999999999 6595.61 True False 7055.021596228082 6044.66217443778 6101.743686432773 6378.272336013512 6864.127430394355 6418.9172723787715 5958.905966044774 6154.1328398216865 6985.159409222032 6064.256200917731 5784.39178301661 1.2196652406813335 1.0449952909803486 1.054863487004447 1.102669489770831 1.1866636437988045 1.1096961466588715 1.0301698414586213 1.06392047265724 1.2075875340482576 1.0483826871345097 1.0 12.497949555532228 -7.540584441405155 24.55560076407918 1.0917963752224857 1.1162729984458455 0.0758322678971386 0.06939695088961921 916.2804150072901 1270762.2329432655 0.013546027051317328 0.020093586654090903 2.8801529970428053e-08 7.540584441405155 0.02447662322335975 SRQELASGLPS(ph)PAATQELPVER ddPTM_A549_MK2206_60min_R1 2 SRQELASGLPSPAATQELPVER 22 1 O95359-3;E7EMZ9;E9PBC6;O95359 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 S(0.003)RQELAS(0.059)GLPS(0.866)PAAT(0.071)QELPVER;S(0.017)RQELAS(0.017)GLPS(0.96)PAAT(0.005)QELPVER 46.29600000000001 0.0046956 2909600.0 1324.73 1204.97 1136.78 1240.4299999999998 2080.6 1471.69 1055.73 1492.4 2465.7 2265.1 2267.73 True False 1548.3120374610592 1266.2978261570004 1297.9924976327525 1544.3354056850178 1774.5464961541536 1627.4232589712424 1247.5424754095327 1703.9522702833174 1907.2228869138032 1753.4123368197293 1704.5900548359734 0.9083192953452071 0.7428752869726508 0.761469007724355 0.9059863990780022 1.0410400384067193 0.9547299976051095 0.7318724357626146 0.999625842852452 1.1188748177328351 1.0286416560071119 1.0 10.735209104869353 -7.470106671387625 0.544826208677707 1.054057372869646 0.8058538052869663 0.33327619509286377 0.1020118393412315 0.7117050714323423 0.41187809633946293 0.027638166352544746 0.07319938761416826 3.3876093947578695e-08 7.470106671387625 -0.2482035675826798 SRQPS(ph)PLLLLPPPAGLTSDPGPSVR ddPTM_A549_MK2206_60min_R1 1 SRQPSPLLLLPPPAGLTSDPGPSVR 25 1 I3L2J0 I3L2J0 CIC 1 S(0.055)RQPS(0.945)PLLLLPPPAGLTSDPGPSVR 61.941 9.6784e-05 19863000.0 421.51 560.34 660.52 313.65 669.6 583.94 608.36 500.09 607.53 688.02 625.17 True False 492.65058306991705 588.85891259435 754.1916681648038 390.4942640802836 571.1027270137564 645.7321432119991 718.8911372606096 570.9792889613932 469.92542502605465 532.5958041493576 469.92303518576074 1.0483644047693301 1.2530965041149216 1.6049259382798111 0.8309749359827 1.2153111983284652 1.3741231964862948 1.5298061244783026 1.2150485211598212 1.0000050855993747 1.1333681566361655 1.0 8.876280678802816 -8.711715850021145 4.725231409658642 0.9995014052193373 1.2699316806645482 0.17385320853298558 0.20323180509032254 0.19512422142965985 9.272305325999088 0.033557487845894594 0.03757022044703083 1.942156174964427e-09 8.711715850021145 0.2704302754452109 SRQPS(ph)PLLLLPPPAGLTSDPGPSVR ddPTM_A549_PD325901_60min_R1 2 SRQPSPLLLLPPPAGLTSDPGPSVR 25 1 I3L2J0 I3L2J0 CIC 1 S(0.262)RQPS(0.737)PLLLLPPPAGLTSDPGPSVR;S(0.227)RQPS(0.773)PLLLLPPPAGLTSDPGPSVR 49.943999999999996 0.0024497 88501000.0 3750.0 3072.7 3509.8999999999996 3137.5 3458.0 4187.6 3850.3 3769.0 3537.0 3324.8 3789.3 True False 4130.697239395906 3331.6472126415892 3748.102920743301 3331.296249220505 3215.122009452375 4153.497573994357 3996.825273465005 3693.824338276698 3388.3521902488246 3114.8715605860834 3323.2401223518104 1.242972847978457 1.0025297871896868 1.1278459523685642 1.0024241783837737 0.967466054537485 1.2498337228352263 1.2026892810371186 1.1115129218115694 1.0195929470937344 0.9372995768905596 1.0 11.698374824099004 -8.791138325233826 5.305849473119595 1.0087402390891897 1.109312939285686 0.2636500837545347 0.09285890252558393 0.22064388229448612 15.982439967273896 0.01582425382811699 0.01703560798825506 1.617564752120238e-09 8.791138325233826 0.10057270019649622 SRQT(ph)PS(ph)PDVVLR ddPTM_A549_MK2206_60min_R1 3 SRQTPSPDVVLR 12 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 2 S(0.483)RQT(0.562)PS(0.955)PDVVLR;S(0.211)RQT(0.97)PS(0.819)PDVVLR;S(0.46)RQT(0.566)PS(0.974)PDVVLR 64.827 0.012957 44217100.0 1395.0299999999997 1525.88 1467.3899999999999 969.05 2372.54 1712.29 1631.28 1801.26 2561.53 1959.3899999999999 2034.6000000000001 True False 1630.4769587910753 1603.5407744395663 1675.487966978063 1206.4672935023077 2023.5425088847333 1893.4833912738873 1927.6624603696616 2056.5941211273957 1981.3475449228692 1516.7624381445448 1529.352667896651 1.0661222836414197 1.0485094825413603 1.0955536954614888 0.7888744818823157 1.3231366128701703 1.2380946730083078 1.2604433894379732 1.3447481174867733 1.2955465318851902 0.9917676085991195 1.0 10.57870541441997 -6.779491928014792 24.999906436692946 1.1858152170022347 1.0100886649529777 0.34982016045842435 0.1339939479324615 272.69390172463756 377637.29550540616 0.022114598797498067 0.041851717432243044 1.661529559387183e-07 6.779491928014792 -0.17572655204925702 SRQT(ph)PS(ph)PDVVLR ddPTM_A549_PD325901_60min_R1 2 SRQTPSPDVVLR 12 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 2 S(0.066)RQT(0.981)PS(0.954)PDVVLR;S(0.22)RQT(0.782)PS(0.998)PDVVLR 87.49799999999999 0.0005826000000000001 30750300.0 2430.8 1898.67 2013.28 2022.19 2279.0 1860.24 1656.0500000000002 1722.92 2036.07 2378.44 1992.87 True False 2677.5730265396196 2058.677584282945 2149.9132876361346 2147.096083573295 2118.9309021231816 1845.0908222006071 1719.0718889753327 1688.5550089954068 1950.5010585241523 2228.264892492891 1747.7596238437848 1.532003022618711 1.177895149995152 1.2300966667875688 1.228484772323132 1.2123697522334869 1.055689121678395 0.9835859951923136 0.9661254247777098 1.116000754288216 1.2749264041197772 1.0 10.771291063702499 -2.0000000000027764 0.3658274852813697 1.038026526133137 6.636302554994812 0.5687324856366027 0.10314541609426846 21.37133532023601 0.25909157749395156 0.019992701279476284 84.98145854775287 0.00999999999993607 2.0000000000027764 5.598276028861674 SRQT(ph)PSPDVVLR ddPTM_A549_MK2206_60min_R1 2 SRQTPSPDVVLR 12 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.397)RQT(0.6)PS(0.003)PDVVLR;S(0.017)RQT(0.98)PS(0.003)PDVVLR 110.84 3.0004e-05 18407900.0 768.81 840.36 804.31 1036.58 1091.01 975.64 740.9 858.54 1284.31 1466.06 1197.6200000000001 True False 898.5663324001393 883.1307345322268 918.3732523188293 1290.5421465338447 930.5238742522073 1078.8815772225819 875.5119396350607 980.2406741684794 993.4158356216359 1134.87602777711 900.2179013695012 0.9981653675550671 0.9810188546447702 1.020167729303881 1.4335886284537815 1.0336651524443157 1.1984671439895604 0.9725555760479153 1.0888926699605057 1.1035281947963407 1.2606681405142284 1.0 9.814130443634179 -7.767231696522084 24.995776623794963 1.0485623933319157 1.1119844975043305 0.0 0.1392680482621105 360.3278989274948 1554934.6409120455 0.01945057553280992 0.0272765813327283 1.7091032635935553e-08 7.767231696522084 0.06342210417241478 SRQT(ph)PSPDVVLR ddPTM_A549_PD325901_60min_R1 2 SRQTPSPDVVLR 12 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q9UPQ0-7;Q6NVB9;D6R8Y0 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.112)RQT(0.888)PSPDVVLR;S(0.016)RQT(0.983)PS(0.001)PDVVLR 101.78 8.766700000000001e-05 22672000.0 2750.7 2497.0 2852.7 1970.98 3136.5 2305.26 2386.0 2760.6000000000004 2637.3 3096.2 3101.6 True False 3029.9490390416845 2707.4309532222624 3046.3013766786567 2092.722958179642 2916.203060337586 2286.4867268665184 2476.8005356692975 2705.537667351195 2526.4634524577978 2900.7054035992014 2720.1228626623324 1.1139015375489725 0.9953340675841209 1.1199131548407617 0.7693486889527409 1.0720850518800975 0.8405821509946831 0.910547302721877 0.9946380380418324 0.9288049033141872 1.0663876413141584 1.0 11.409456101340092 SRRERVR ddPTM_A549_PD325901_60min_R1 1 SRRERVR 7 3 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 40.103 0.03762 104700000.0 3359.5 3552.8 3590.0 4721.1 5206.6 4444.9 5335.2 4941.6 4482.9 4078.8 4573.1 False True 3700.553966866814 3852.2069245526864 3833.638988423727 5012.7116246039595 4840.906377794895 4408.702208101898 5538.233955533464 4843.035911389796 4294.499302704684 3821.2638719076363 4010.637691269382 0.9226846830174716 0.9604973625362426 0.9558676907587645 1.2498540158628533 1.2070166268902565 1.0992521757073817 1.380886128804268 1.2075475982117339 1.0707771764209044 0.9527821174737406 1.0 11.969615928047661 -6.049364757893314 23.36674677414123 1.1001394188917686 0.9457387589972391 0.3083754061959615 0.11967636017543247 206.10841075455875 97561.05842076479 0.01865873530761703 0.049368110544528436 8.925555238699577e-07 6.049364757893314 -0.15440065989452945 SRRS(ph)PLLK ddPTM_A549_MK2206_60min_R1 2 SRRSPLLK 8 2 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 S(0.111)RRS(0.889)PLLK;S(0.191)RRS(0.809)PLLK 63.623999999999995 0.0020139 49087000.0 5145.6 5396.0 4601.5 4708.1 6960.1 4841.1 4639.9 4652.1 7154.299999999999 8482.5 7644.6 True False 6014.051482158348 5670.633351820527 5254.061892236942 5861.584711354641 5936.278509988719 5353.381988737902 5482.909770161587 5311.549421458736 5533.86247306948 6566.2973586478965 5746.234839773294 1.0466073263367741 0.9868432999936791 0.9143486193551098 1.0200739918916883 1.0330727294505984 0.9316329976080666 0.9541743285900763 0.9243530014983329 0.9630414745262669 1.1427130184792371 1.0 12.488401239463098 -7.257340299465782 24.996811842802828 0.9717448931309152 0.9957835425422614 0.0 0.0643449672288712 815.1254761271271 4970732.368114681 0.00615524155098964 0.01043543080118963 5.52916691341843e-08 7.257340299465782 0.024038649411346258 SRRS(ph)PLLK ddPTM_A549_PD325901_60min_R1 3 SRRSPLLK 8 2 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 S(0.25)RRS(0.75)PLLK;S(0.106)RRS(0.894)PLLK;S(0.191)RRS(0.809)PLLK 71.524 0.0012500999999999999 68325000.0 7886.7 8481.800000000001 8570.9 9740.52 10601.1 10032.9 9763.199999999999 9792.5 10164.599999999999 9328.44 10584.3 True False 8687.351978118317 9196.591052879687 9152.572815008622 10342.169798074045 9856.515307809594 9951.195388797396 10134.743918628039 9597.18090543236 9737.417210348656 8739.440706398475 9282.49819940577 0.9358851239717393 0.9907452557834503 0.9860031877619468 1.1141580182300612 1.0618386447347299 1.0720384938436545 1.0918121071412463 1.0339006482163104 1.049008251999662 0.9414966228550348 1.0 13.180297414891996 -6.022146478186187 23.60821941145969 1.0407438548720902 0.9695798989466357 0.351031226350902 0.045357634478102 285.7779019909689 304642.0388805332 0.005622381154048837 0.015036566269306734 9.502842291716182e-07 6.022146478186187 -0.07116395592545455 SRS(ph)AEPRPELGPGQETGT(ph)NSR ddPTM_A549_MK2206_60min_R1 1 SRSAEPRPELGPGQETGTNSR 21 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 S(0.431)RS(0.569)AEPRPELGPGQET(0.208)GT(0.551)NS(0.241)R 104.29 4.7025e-10 10708000.0 217.9 391.46 215.28 228.82 441.59 419.59 393.44 310.42 281.36 479.52 600.7 True False 254.67619285648013 411.38364193915146 245.80994114109924 284.8809102721202 376.6326959707356 463.99073529869946 464.92295523015054 354.4229856213799 217.63240923959447 371.19609895889647 451.5296115234042 0.5640298805591833 0.9110889550547853 0.5443938445404884 0.6309240922449534 0.8341262374798061 1.0275975782258289 1.0296621602768397 0.7849385213643049 0.4819892288023593 0.8220858377516537 1.0 8.818676793199852 -6.763040475813574 24.96128316520982 0.7989803452984747 0.6719137906961121 0.17639342886281373 0.17454452143039687 101.70145259289836 1585580.5707858198 0.03327321086173314 0.06533297351273572 1.7256770531110737e-07 6.763040475813574 -0.1270665546023626 SRS(ph)AEPRPELGPGQETGTNS(ph)R ddPTM_A549_MK2206_60min_R1 2 SRSAEPRPELGPGQETGTNSR 21 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 S(0.188)RS(0.812)AEPRPELGPGQET(0.365)GT(0.207)NS(0.429)R;S(0.232)RS(0.768)AEPRPELGPGQET(0.284)GT(0.239)NS(0.477)R 59.016999999999996 0.0025210999999999996 25364000.0 2487.2 2798.0 2765.3999999999996 2320.8999999999996 5482.6 3128.6000000000004 3581.1 3541.6 5444.7 3516.4 4501.9 True False 2906.9785537982434 2940.406248775729 3157.575303008156 2889.5206041891597 4676.116802756302 3459.6663754033984 4231.739515490779 4043.6326456951174 4211.484143399276 2722.042797754137 3383.9539838808305 0.8590478971183952 0.8689261918992095 0.9331023170081479 0.8538888584044402 1.381849997083464 1.022373942400877 1.2505310461218744 1.1949431537652724 1.2445453346766278 0.8043971078567707 1.0 11.724494235011704 -6.722306603975365 24.999983086753794 1.1426685295433525 0.8819228660382358 0.4004407256108553 0.14625751053764632 99.92447603402417 63836.29874746235 0.017157811460206743 0.03571638010823932 1.8953673540162835e-07 6.722306603975365 -0.26074566350511674 SRS(ph)AEPRPELGPGQETGTNS(ph)R ddPTM_A549_PD325901_60min_R1 4 SRSAEPRPELGPGQETGTNSR 21 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 S(0.423)RS(0.577)AEPRPELGPGQET(0.004)GT(0.054)NS(0.942)R;S(0.232)RS(0.768)AEPRPELGPGQET(0.041)GT(0.034)NS(0.925)R;S(0.408)RS(0.592)AEPRPELGPGQET(0.037)GT(0.318)NS(0.645)R;S(0.259)RS(0.741)AEPRPELGPGQET(0.166)GT(0.136)NS(0.698)R 138.9 9.440600000000001e-19 53400600.0 6622.6900000000005 5575.93 5780.062 5365.790000000001 7172.610000000001 6499.860000000001 5560.21 6665.26 9014.04 5827.04 6798.110000000001 True False 7295.020613433301 6045.833189828038 6172.3317656563895 5697.2226617067345 6668.830617761197 6446.927295181713 5771.806834213656 6532.316160504685 8635.211245968485 5459.11969995113 5961.985566769869 1.2235891099927056 1.0140637078233645 1.0352812324905516 0.9555914884231127 1.118558665242507 1.0813389638369384 0.9681014436505504 1.0956611832329233 1.4483784217959683 0.9156546319700023 1.0 12.541577167409026 -8.54037375496789 24.984477368116373 1.214907181834469 1.0520774832356017 0.0 0.14863833740007196 323.7142722545117 462291.71647322027 0.028420046898771936 0.03222852443012482 2.88155056576979e-09 8.54037375496789 -0.1628296985988673 SRS(ph)AEPRPELGPGQETGTNSR ddPTM_A549_MK2206_60min_R1 1 SRSAEPRPELGPGQETGTNSR 21 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(0.201)RS(0.799)AEPRPELGPGQETGTNSR 55.783 0.0021384 10521000.0 1910.6 1969.6 1778.1 1571.1 1879.2 1809.8 2048.7 1690.7 2240.8 2565.7 2233.2 True False 2233.062570314782 2069.8442271582094 2030.261317089318 1956.01957052936 1602.7721693611882 2001.311834751989 2420.9222711976627 1930.3619025515968 1733.2623778223024 1986.1065880439612 1678.6348068154925 1.330284920369955 1.2330521318599803 1.2094717140656042 1.165244258362597 0.9548069436268738 1.19222586510561 1.44219711242039 1.1499594162554339 1.0325428561263084 1.1831677622673438 1.0 10.71307268545369 -8.699168545626723 3.9767231857174132 1.0145989767110755 1.2104047184852558 0.17235729825281 0.12281220169446853 0.17537876986865644 5.55697322088044 0.020070813378766587 0.02243969285870425 1.9990858925291536e-09 8.699168545626723 0.1958057417741803 SRS(ph)AEPRPELGPGQETGTNSR ddPTM_A549_PD325901_60min_R1 1 SRSAEPRPELGPGQETGTNSR 21 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(0.255)RS(0.745)AEPRPELGPGQETGTNSR 57.339 0.0015907999999999999 12859000.0 1908.5 2002.1 2234.6 2273.7 2506.9 2279.1 2033.4 2366.1 2659.0 2589.3 2684.8 True False 2102.249515036558 2170.823993370561 2386.2533937414096 2414.1412850526403 2330.8239923354995 2260.539765233196 2110.7821497191753 2318.9062793304593 2547.25147692158 2425.8111561072983 2354.5866203494425 0.8928316745147242 0.9219554611451884 1.0134489736407606 1.0252930447274686 0.989907940608948 0.9600580185483729 0.8964555100571818 0.9848464521497672 1.081825342464379 1.030249273966946 1.0 11.201258082028735 -8.563551834491822 8.717402766693425 1.0384459553412444 0.9604328645266461 0.38521958757575137 0.044167539336853585 0.2441531126075235 48.205791641834416 0.008665434977965798 0.009838805695034519 2.7317953755502474e-09 8.563551834491822 -0.07801309081459828 SRS(ph)APDGGDEENQEQLQDQIAEGSSIEEEEKTDNATLLR ddPTM_A549_MK2206_60min_R1 1 SRSAPDGGDEENQEQLQDQIAEGSSIEEEEKTDNATLLR 39 2 Q8IZQ1;Q8IZQ1-2;H0Y9T6 Q8IZQ1 WDFY3 WD repeat and FYVE domain-containing protein 3 1 S(0.159)RS(0.841)APDGGDEENQEQLQDQIAEGSSIEEEEKTDNATLLR 120.4 9.4805e-22 4479300.0 442.98 514.32 373.31 444.44 927.77 649.13 529.72 454.6 798.36 587.37 756.67 True False 517.7441941788139 540.4966911616626 426.2509714204002 553.32781995167 791.2962620094871 717.8205057423792 625.9632671932578 519.0409421541111 617.5327347189459 454.6827090538181 568.767955970392 0.9102907235613776 0.95029385092468 0.7494285972794664 0.9728533651436478 1.391246208059371 1.2620621436341015 1.100560009793947 0.9125706480221093 1.0857375635119155 0.7994168874687575 1.0 9.15169637648863 -6.524073714195933 24.999992352646487 1.0774423205269645 0.8752179151844522 0.25914734479998136 0.15560093797107025 37.80656093222075 790955.993848805 0.020230174316308535 0.042381599010630135 2.9917567930303245e-07 6.524073714195933 -0.2022244053425123 SRS(ph)APPNLWAAQR ddPTM_A549_PD325901_60min_R1 2 SRSAPPNLWAAQR 13 1 Q92934;F5H3B1;F5H1R6 Q92934 BAD Bcl2-associated agonist of cell death 1 S(0.062)RS(0.938)APPNLWAAQR;S(0.001)RS(0.999)APPNLWAAQR 174.35 2.0218000000000002e-22 64515000.0 6406.5 5920.3 6028.2 6089.700000000001 7759.3 7063.5 6048.6 6943.799999999999 7751.8 7339.2 8698.5 True False 7056.88316378397 6419.224458294654 6437.309902511396 6465.846938287842 7214.313536131817 7005.977197895962 6278.782782920922 6805.300461694277 7426.018803610641 6875.801659484296 7628.639644334632 0.9250513188186477 0.8414638464489349 0.8438345763640873 0.8475753528467777 0.9456880744772743 0.9183783118001796 0.8230540536259077 0.892072607827032 0.9734394531435934 0.9013142552342963 1.0 12.897210100129822 -8.772560749101718 3.4831123340362464 0.9886776335563718 0.8767602929901238 0.3282571373823795 0.04539714790165637 0.10628804102737127 2.651680670949829 0.006732477744828631 0.007308447793069505 1.688259689244533e-09 8.772560749101718 -0.11191734056624802 SRS(ph)AQEPAR ddPTM_A549_MK2206_60min_R1 2 SRSAQEPAR 9 1 P25685;M0R128;A0A1B0GX60;M0R1D6;M0QZD0;M0QYT3;M0QXK0;M0R080;P25685-2 P25685 DNAJB1 DnaJ homolog subfamily B member 1 1 S(0.139)RS(0.861)AQEPAR;S(0.15)RS(0.85)AQEPAR 73.46600000000001 0.00062188 15794500.0 1124.67 1289.51 959.5999999999999 1125.33 1016.95 859.6199999999999 849.06 883.53 1165.67 1642.53 1564.78 True False 1314.4868004584562 1355.1405510574662 1095.6857093970596 1401.0359005179828 867.3580021455189 950.5844178304247 1003.3232115893436 1008.7730831971448 901.6476061924863 1271.4813322133714 1176.2019402690064 1.117568978127874 1.1521325587573297 0.9315455721374408 1.1911525160361112 0.7374226928644136 0.8081813039800111 0.8530195175157388 0.8576529664340042 0.766575513373386 1.0810059809309394 1.0 10.199920060153982 -6.756970921282758 24.99999245800975 0.8670392777953724 1.0900626437364362 0.491776745585198 0.11039551099398337 74.95265071428518 419337.2830233503 0.015614272450895694 0.03165697358631656 1.7499638556684743e-07 6.756970921282758 0.22302336594106387 SRS(ph)AQEPAR ddPTM_A549_PD325901_60min_R1 1 SRSAQEPAR 9 1 P25685;M0R128;A0A1B0GX60;M0R1D6;M0QZD0;M0QYT3;M0QXK0;M0R080;P25685-2 P25685 DNAJB1 DnaJ homolog subfamily B member 1 1 S(0.385)RS(0.615)AQEPAR 109.95 0.00010641 18655000.0 1291.8 1463.5 1284.6 1470.5 2144.6 2072.3 1314.3 1502.5 1222.5 1545.7 1483.2 True False 1422.9425850271025 1586.8342811536975 1371.7806809273327 1561.3294452521923 1993.9706944683523 2055.4238758688766 1364.3164057125555 1472.5314588115523 1171.1225763582672 1448.1042382091878 1300.7758027794605 1.0939184000706343 1.2199137451380901 1.054586561339895 1.2003063417354383 1.532908815037682 1.5801522994792074 1.0488482356431625 1.1320409371584936 0.9003262313581218 1.1132619742117897 1.0 10.345156610214444 -8.276648596451318 2.1281205691314597 0.9566311003570199 1.2702992950534826 0.27575494444521886 0.17086238227902484 0.24078991254701712 2.1331414207377097 0.029893624105406368 0.038162711695919824 5.288730091888706e-09 8.276648596451318 0.3136681946964627 SRS(ph)AVTLPR ddPTM_A549_MK2206_60min_R1 2 SRSAVTLPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.163)RS(0.834)AVT(0.003)LPR;S(0.092)RS(0.908)AVTLPR 65.395 0.0016285 6986200.0 844.53 799.8299999999999 784.18 717.98 1216.25 827.1400000000001 802.7 621.8499999999999 1183.29 1289.37 1234.19 True False 987.0660172238782 840.5379306498531 895.3885156262878 893.8851322313471 1037.3412361566327 914.6674057889048 948.5401996829042 709.9991418357548 915.2767043258444 998.1004214936446 927.7065610888468 1.06398516365494 0.9060385750245379 0.9651635044764291 0.9635429668430894 1.1181781822682249 0.9859447417460991 1.022457142665462 0.7653272830176286 0.9866015211227853 1.0758794465376817 1.0 9.85752473455887 -6.511551222301323 0.001437063390659035 1.8708054076362768 0.08871202361398867 0.0026615677868155885 0.08992084846213717 2245297.029721742 745.8586241374754 459303.5133082492 465641.17051830294 3.079277138722049e-07 6.511551222301323 -1.7820933840222881 SRS(ph)AVTLPR ddPTM_A549_PD325901_60min_R1 1 SRSAVTLPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.17)RS(0.83)AVTLPR 63.091 0.0019195 8144400.0 791.28 502.38 744.0 709.8 729.6 801.64 741.09 478.88 658.46 628.93 801.96 True False 871.6101630904516 544.7173257027636 794.4923140354466 753.6427339272391 678.3554129833585 795.1117096228944 769.2925854900085 469.3283627259075 630.7872160563311 589.2192524661345 703.3240040432958 1.2392725942520175 0.7744898831424377 1.129624908958089 1.0715441668344448 0.9644991626669972 1.130505577872966 1.0937954357699582 0.6673003623192366 0.8968657580717245 0.8377636040840474 1.0 9.458045646271868 SRS(ph)DIDVNAAAGAK ddPTM_A549_MK2206_60min_R1 3 SRSDIDVNAAAGAK 14 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.299)RS(0.701)DIDVNAAAGAK;S(0.001)RS(0.999)DIDVNAAAGAK;S(0.01)RS(0.99)DIDVNAAAGAK 225.94 4.2423000000000002e-47 465481000.0 21892.5 22220.5 22533.6 20704.6 28319.199999999997 21315.9 22409.4 21605.6 32928.6 33070.0 33088.0 True False 25587.418779763608 23351.428538570788 25729.203315203806 25777.227929464803 24153.48319421739 23571.534389650726 26480.897908027982 24668.25996437498 25470.32467616898 25599.46403188752 24871.336417656727 1.0287914710364545 0.9388891753316914 1.0344921914585201 1.0364231136033752 0.9711373280717752 0.9477389551498632 1.0647155208446535 0.9918349199306565 1.0240834769975216 1.0292757736055502 1.0 14.60219640987568 -7.751547938625484 24.999723608754273 1.0135224755841603 0.9933344932862639 0.12220018890885387 0.03564647596237836 455.96655785163904 1152410.6680648327 0.005233943971295381 0.007709619180270712 1.7719524413307784e-08 7.751547938625484 -0.020187982297896423 SRS(ph)DIDVNAAASAK ddPTM_A549_MK2206_60min_R1 3 SRSDIDVNAAASAK 14 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.269)RS(0.731)DIDVNAAASAK;S(0.001)RS(0.999)DIDVNAAASAK;SRS(1)DIDVNAAASAK 238.34 1.8475999999999995e-57 480741000.0 26442.699999999997 27814.800000000003 27179.5 23242.2 36703.0 25508.9 27137.9 25907.0 36954.0 37210.0 41880.0 True False 30905.58129805436 29230.45451338353 31033.96179507855 28936.54004338202 31304.03732017012 28208.234866562612 32068.505151332603 29579.396586859995 28583.9780034119 28804.23515653265 31480.040170801018 0.9817516474048374 0.9285393015634057 0.9858298028432562 0.9192027674164726 0.9944090652465511 0.8960673084758916 1.018693272859207 0.9396238513792005 0.908003225165026 0.9149999491820763 1.0 14.942149761378916 -11.13793518409555 1.5250258434349886 0.9998468417841252 0.9466018320863513 0.0 0.04494727761171119 0.4836140871373585 2.0244712635126514 0.02560792831974381 0.005562590422252987 7.278884295101143e-12 11.13793518409555 -0.053245009697773904 SRS(ph)DIDVNAAASAK ddPTM_A549_PD325901_60min_R1 4 SRSDIDVNAAASAK 14 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.15)RS(0.85)DIDVNAAASAK;S(0.019)RS(0.981)DIDVNAAASAK;S(0.378)RS(0.622)DIDVNAAASAK;SRS(1)DIDVNAAASAK 295.01 8.643099999999997e-117 1665685000.0 68612.0 67505.0 69050.0 69378.0 80587.0 69147.0 76960.0 76177.0 76685.0 76585.0 77521.0 True False 75577.43973051503 73193.88325881812 73736.14823138108 73663.32149112987 74926.84713005747 68583.88975761484 79888.75491412787 74657.58997529952 73462.19612927083 71749.41002992215 67986.40844610735 1.111655130163628 1.076595821602177 1.0845719007179433 1.083500705137595 1.1020856792200133 1.008788246432831 1.1750694990375243 1.0981252235802454 1.0805423879319074 1.055349321575028 1.0 16.052958737275823 -10.324292612423818 0.7486108662878723 1.0004385799528652 1.0911183890859983 0.23826424976625216 0.039890772653532386 0.4505479492617864 0.4678416004226803 0.022372629776388663 0.007127964444566489 4.7392256522572736e-11 10.324292612423818 0.09067980913313312 SRS(ph)DVDMDAAAEATR ddPTM_A549_MK2206_60min_R1 1 SRSDVDMDAAAEATR 15 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.188)RS(0.812)DVDMDAAAEATR 62.861000000000004 0.0029816999999999995 2768500.0 457.47 699.09 598.95 414.0 741.65 382.95 510.68 580.84 498.77 553.03 706.7 True False 534.6797519323267 734.6706949451838 683.8901163436518 515.430018585166 632.5542674578144 423.473514818363 603.4639456510092 663.1758487478968 385.7993913720234 428.1001389039839 531.2068860722325 1.006537689836389 1.383021783428622 1.2874270538930057 0.970299956757486 1.1907870248726424 0.7971913126908899 1.136024327758717 1.2484323267182185 0.7262695599159894 0.8059009589829973 1.0 9.053130038338082 -7.215118573797761 0.6021100173486578 0.8913982401334369 1.2349440938435075 0.24570196950038714 0.18007962267474267 0.8356752175066197 0.564602199172583 0.040981857742163945 0.1298019827616106 6.093705003776958e-08 7.215118573797761 0.3435458537100705 SRS(ph)DVDMDAAAEATR ddPTM_A549_PD325901_60min_R1 2 SRSDVDMDAAAEATR 15 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 S(0.198)RS(0.802)DVDMDAAAEATR;S(0.163)RS(0.837)DVDMDAAAEATR 84.41 0.00011009999999999999 9302200.0 1158.6599999999999 1391.82 1095.65 1261.3600000000001 1305.79 1509.34 1385.0 974.05 964.1300000000001 1584.5900000000001 1334.96 True False 1276.2863102395902 1509.1135559927147 1170.00739767868 1339.2713424435942 1214.0758151309476 1497.0484354600826 1437.7069329010803 954.6218086225571 923.6109689523886 1484.5387169721791 1170.7683830086758 1.0901270727517867 1.288994115227599 0.9993500120595672 1.1439251024202537 1.036990606127387 1.2786888142750512 1.2280028686856215 0.8153805846459069 0.7888929888752764 1.2680037644654931 1.0 10.19323997558588 -8.261499594367285 24.999994523525526 0.8911553873036374 1.1517763263669203 0.1998917347333682 0.15108068072410893 3.1599079400649925 1311820.6977330544 0.0184902116050156 0.02308894701677825 5.476466124656959e-09 8.261499594367285 0.2606209390632829 SRS(ph)DVDMDPSSATAVLGPAR ddPTM_A549_MK2206_60min_R1 2 SRSDVDMDPSSATAVLGPAR 20 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 S(0.047)RS(0.953)DVDMDPSSATAVLGPAR;S(0.022)RS(0.978)DVDMDPSSATAVLGPAR 165.74 1.2973e-27 8209500.0 2487.3999999999996 2743.8 2666.5 2365.79 3953.7 2978.9 2612.3999999999996 2619.2 4497.3 4957.5 4633.8 True False 2907.2123089087136 2883.447700282644 3044.6497958600035 2945.4086562043503 3372.1159674347214 3294.1252207662155 3087.0392645466754 2990.47962096359 3478.6687307123534 3837.597306866719 3483.099573626021 0.8346624170385718 0.8278395834893919 0.8741208028946537 0.8456286115122695 0.9681365393537222 0.945745348685775 0.8862908450627399 0.8585685128290498 0.9987279023122916 1.1017765142073312 1.0 11.766156001434863 -6.7153277986188105 0.23914270995327627 1.0233392359300486 0.7526865930637829 0.636917504730352 0.05038160994695949 2.3777301000378324 0.2012982098548543 0.0395226326016333 0.19032576254914485 1.9260705967325495e-07 6.7153277986188105 -0.27065264286626567 SRS(ph)DVDMDPSSATAVLGPAR ddPTM_A549_PD325901_60min_R1 4 SRSDVDMDPSSATAVLGPAR 20 1 M0QZR4;M0QYC1;M0QZH8;M0QYS3 M0QZR4 ARHGEF1 1 S(0.229)RS(0.771)DVDMDPSSATAVLGPAR;S(0.225)RS(0.69)DVDMDPS(0.067)S(0.013)AT(0.004)AVLGPAR;S(0.212)RS(0.788)DVDMDPSSATAVLGPAR;S(0.015)RS(0.983)DVDMDPS(0.001)SATAVLGPAR 191.53 7.0747e-45 102156800.0 13356.199999999999 12750.800000000001 11758.2 11643.2 13993.3 13983.400000000001 13326.0 12650.199999999999 15002.2 14441.0 16032.7 True False 14712.111591685229 13825.354664936494 12556.182159800523 12362.37402037424 13010.458882264293 13869.523826581488 13833.128222267005 12397.881837110082 14371.709705555822 13529.192795483516 14060.77953965901 1.046322613208543 0.9832566271266475 0.8929933169341921 0.8792097184587564 0.9253013921146943 0.9863979296070977 0.9838094810639834 0.8817350277160199 1.022113295000453 0.9621936505955355 1.0 13.779388960220516 -8.802029568158503 24.997323593360537 1.0104424138980705 0.9462681393030581 0.12561098336525744 0.05126684045823148 152.33439558445255 93813.93502087728 0.008782040268764807 0.009349252140802572 1.5775038645304666e-09 8.802029568158503 -0.06417427459501246 SRS(ph)EDEDDDLQYADHDYEVPQQK ddPTM_A549_PD325901_60min_R1 1 SRSEDEDDDLQYADHDYEVPQQK 23 1 E7EWZ1;P10243-2;P10243 E7EWZ1 MYBL1 Myb-related protein A 1 S(0.265)RS(0.735)EDEDDDLQYADHDYEVPQQK 72.72800000000001 4.6723999999999995e-05 8403800.0 2265.2 2349.5 2097.5 2155.0 2679.1 2089.7 2150.4 2539.8 2776.8 2692.4 2972.7 True False 2495.161436447896 2547.5006105709685 2239.848963292137 2288.1094556399003 2490.9292583932497 2072.682176037827 2232.234648744032 2489.1416965654457 2660.100752582114 2522.401404512141 2607.0767454979114 0.9570724915393155 0.9771483002831339 0.8591419363315905 0.8776532795174415 0.955449149203132 0.7950215426596415 0.8562213032657424 0.9547634916631724 1.0203384910612119 0.9675209634192804 1.0 11.34821733731675 -8.530071802910454 4.171240503866094 1.0092397831515725 0.896208333368429 0.41374122128779856 0.0516737609180306 0.12859630845335285 5.287923761136124 0.008715128774820929 0.010162142205766703 2.9507213367570675e-09 8.530071802910454 -0.1130314497831435 SRS(ph)ES(ph)ETSTMAAK ddPTM_A549_PD325901_60min_R1 1 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 2 S(0.095)RS(0.708)ES(0.55)ET(0.422)S(0.106)T(0.119)MAAK 51.00899999999999 0.020028 6777500.0 1528.4 1610.9 1506.9 1601.0 2206.0 1959.1 1546.4 1738.1 1565.5 1732.2 1809.0 True False 1683.562042851388 1746.6561964540415 1609.1672957258263 1699.8901338651876 2051.0581702868535 1943.1457391375359 1605.2490982225495 1703.4322319869275 1499.7074791728974 1622.8285963808976 1586.5044681958211 1.0611769942040825 1.1009462825152616 1.0142847549340832 1.0714688599637598 1.2928158800708105 1.2247968903278845 1.0118150502582857 1.0737015029803711 0.9452904225844194 1.0228956986338553 1.0 10.631635869097515 -8.309609449706272 1.8856588625445305 0.9757182385009314 1.1219684076749146 0.29562452024472563 0.08144951115146573 0.2711488822007045 1.8789932044797604 0.01493351162574756 0.018914774904092713 4.902194634560008e-09 8.309609449706272 0.14625016917398315 SRS(ph)ESDLSQPES(ph)DEEGYALSGR ddPTM_A549_PD325901_60min_R1 1 SRSESDLSQPESDEEGYALSGR 22 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 2 S(0.354)RS(0.47)ES(0.169)DLS(0.009)QPES(0.998)DEEGYALSGR 84.561 1.1288e-05 8969000.0 339.57 190.29 199.08 454.43 354.11 241.95 350.32 357.32 180.52 512.88 367.72 True False 374.04289642177844 206.32640612281304 212.59076596529133 482.4991090145892 329.23853521318136 239.97963941826677 363.6516193024595 350.1929722878829 172.93337217521008 480.49666927135144 322.4927711691364 1.159848932631131 0.6397861427244269 0.6592109497356602 1.496154804541448 1.0209175666778187 0.7441395927985179 1.1276271960580992 1.0858940218049684 0.5362395304188461 1.4899455498782248 1.0 8.33312301196853 -8.731149747748715 24.995315644303936 0.7810018135724268 0.9829524531625197 0.0 0.3327176875008052 367.92084159828323 303611.8960198432 0.04775551207088794 0.05414642578552511 1.857163981659938e-09 8.731149747748715 0.20195063959009285 SRS(ph)ESDSEK ddPTM_A549_PD325901_60min_R1 2 SRSESDSEK 9 1 Q9HCI7-2;Q9HCI7 Q9HCI7-2 MSL2 E3 ubiquitin-protein ligase MSL2 1 S(0.011)RS(0.623)ES(0.209)DS(0.157)EK;S(0.029)RS(0.835)ES(0.126)DS(0.011)EK 51.841 0.020932 4509100.0 1446.6100000000001 1860.0700000000002 1553.42 1396.19 1764.3400000000001 1247.1599999999999 920.1 1204.63 1371.25 1934.2199999999998 1797.94 True False 1593.4687822620037 2016.8246268162334 1658.8444226733125 1482.4294853224462 1640.4188450425697 1237.00354245458 955.1149089980394 1180.6027096360467 1313.6211311503255 1812.0930191039488 1576.8047780807062 1.0105682100999092 1.2790579118304812 1.0520290436286381 0.9401477633311499 1.0403436543611282 0.7845001230654984 0.6057280661976491 0.7487310579265758 0.8330905318217459 1.1492183714141433 1.0 10.622788337860142 -6.4126959366173235 1.457106744740878 0.8754869549640255 1.1452024511217744 0.3259023289119498 0.15116665879245797 0.36629370052692817 1.4766424204930761 0.021918870382506193 0.0759115820156303 3.8663757958358366e-07 6.4126959366173235 0.2697154961577489 SRS(ph)ESDVSSVEQDSFIEPYATTSQLRPR ddPTM_A549_MK2206_60min_R1 1 SRSESDVSSVEQDSFIEPYATTSQLRPR 28 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 S(0.046)RS(0.907)ES(0.04)DVS(0.003)S(0.003)VEQDSFIEPYATTSQLRPR 61.941 0.00024917 9867500.0 963.8 1451.8 983.89 1112.8 1041.5 839.51 880.13 936.24 1636.1 1790.4 1592.4 True False 1126.465877352343 1525.69041886083 1123.4203966430516 1385.436049955491 888.2967296667072 928.3463909783634 1040.0382284127497 1068.9548871147497 1265.5259623148288 1385.9473965131965 1196.9631319957866 0.9411032363829802 1.274634429480657 0.9385588967722743 1.1574592507669381 0.7421253887624619 0.7755847829919887 0.8688974627636323 0.8930558164581066 1.057280653418892 1.1578864540316312 1.0 10.225163000764733 SRS(ph)ESDVSSVEQDSFIEPYATTSQLRPR ddPTM_A549_PD325901_60min_R1 1 SRSESDVSSVEQDSFIEPYATTSQLRPR 28 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 S(0.038)RS(0.933)ES(0.008)DVS(0.011)S(0.011)VEQDSFIEPYATTSQLRPR 144.45 6.047099999999999e-36 16020000.0 1572.6 1533.2 1216.8 1470.5 1841.8 1438.5 1974.7 1406.7 1577.1 1298.3 1288.3 True False 1732.2491943130678 1662.4081447658684 1299.379365212811 1561.3294452521923 1712.4383218650628 1426.785332933155 2049.8482890973023 1378.642264965198 1510.819971512984 1216.3251164307355 1129.8472672065661 1.5331711148851825 1.4713565213783324 1.1500486861603834 1.3818942529395344 1.5156369994139955 1.2628125715263607 1.8142702545675455 1.22020232732319 1.3371895612478089 1.0765394153122814 1.0 10.141912046916493 -10.18345342802349 0.5912227225821203 0.9864695569804522 1.4222117282346818 0.41876669416058354 0.17101128982514804 0.5969399538268386 0.38335496959095655 0.12694690714719495 0.03821276071881332 6.554605709945801e-11 10.18345342802349 0.43574217125422954 SRS(ph)ESET(ph)STMAAK ddPTM_A549_PD325901_60min_R1 1 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 2 S(0.131)RS(0.861)ES(0.301)ET(0.552)S(0.073)T(0.082)MAAK 55.885 0.006809999999999999 8172300.0 1609.0 1536.0 1163.1 1303.9 1674.8 1976.0 1255.0 1789.5 1513.0 1650.1 1575.4 True False 1772.3444955168038 1665.4441105924686 1242.0349602884783 1384.438941628244 1557.167825746338 1959.9081111407122 1302.7597117623504 1753.807018664407 1449.4138715992294 1545.9124043921715 1381.6357872834155 1.2827870498357625 1.2054147163248279 0.8989597488138161 1.0020288663413532 1.1270465343171625 1.4185417960215845 0.9429110940473308 1.2693699995371124 1.0490564046904718 1.1189000883016775 1.0 10.432161641972511 -8.976394390835333 21.241579042926823 1.0216419145710562 1.1360784668212802 0.05196620363832549 0.14936240409910997 50.280897576858365 45247.26935309556 0.02540045256394083 0.026249628606692863 1.0558582293623332e-09 8.976394390835333 0.11443655225022398 SRS(ph)ESETSTMAAK ddPTM_A549_MK2206_60min_R1 2 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.431)RS(0.546)ES(0.023)ETSTMAAK;S(0.055)RS(0.944)ES(0.002)ETSTMAAK 159.13 1.4127e-18 81189000.0 6408.3 6564.0 5784.1 5887.900000000001 9277.199999999999 7689.6 7117.1 7096.1 11205.300000000001 10147.099999999999 10653.400000000001 True False 7489.864372107303 6898.079562889166 6604.372354859867 7330.43576431788 7912.536169432526 8503.308368056625 8410.184944765415 8101.993905894829 8667.317441187182 7854.863062532986 8007.866761117753 0.9353133107152064 0.8614128791930996 0.8247355446680804 0.9154043121584959 0.9880953823872163 1.0618693619310067 1.0502403693329565 1.0117543345294044 1.0823503561861687 0.9808933261317886 1.0 12.967202254755847 -6.795878628714311 2.4639124532060785 1.0396643861327992 0.8724574967959725 0.7746767980265465 0.03718600044891848 0.09317540217661839 1.154357305591091 0.0056677149931358434 0.012280945985493156 1.6000051159092907e-07 6.795878628714311 -0.1672068893368267 SRS(ph)ESETSTMAAK ddPTM_A549_PD325901_60min_R1 3 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.09)RS(0.868)ES(0.036)ET(0.005)STMAAK;SRS(0.952)ES(0.047)ETST(0.001)MAAK;S(0.089)RS(0.893)ES(0.011)ET(0.004)S(0.004)T(0.001)MAAK 155.38 1.5671000000000001e-18 165691000.0 16626.6 16429.4 17340.9 16544.9 19773.0 18613.3 19395.5 20737.4 18503.7 21386.4 20544.600000000002 True False 18314.520192144006 17813.963196984307 18517.75775330279 17566.840896805832 18384.21269314685 18461.719456019953 20133.606366124837 20323.77628882442 17726.05383735008 20036.059054174137 18017.74444294963 1.0164713041709559 0.9886899691240174 1.0277511600820166 0.9749744732160279 1.0203392967059546 1.024640987359772 1.1174321197569845 1.12798671072156 0.9838109255837685 1.1120181617413425 1.0 14.137130797768377 -4.828087710631019 16.965651431481 1.0129140529128273 3.958552594370136 0.0 0.05834080517233283 5550.583173791934 543944.1688092016 0.0073993261198370625 4463.543158535507 1.4856355712565975e-05 4.828087710631019 2.9456385414573085 SRS(ph)FDYNYR ddPTM_A549_MK2206_60min_R1 3 SRSFDYNYR 9 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.15)RS(0.85)FDYNYR;S(0.009)RS(0.991)FDYNYR;S(0.013)RS(0.986)FDYNY(0.001)R 99.5 0.00022428 49958700.0 8978.46 10008.560000000001 9445.560000000001 7059.83 13801.439999999999 9090.619999999999 9817.84 9457.2 14752.5 13535.7 14652.9 True False 10493.804545728282 10517.952953983844 10785.082439821264 8789.48866692781 11771.266458657008 10052.583374534825 11601.6144438206 10797.787061460325 11411.082304901602 10477.975969048073 11014.18053053319 0.9527539989595833 0.9549464823848021 0.9791997153054803 0.7980156710307993 1.0687373814170782 0.9126946255027639 1.053334327656873 0.9803531939146098 1.0360355246827606 0.9513168900765093 1.0 13.427074540179248 -7.386015337997948 1.3419121300254728 1.0158473545034556 0.9367775538001046 0.11769110180561693 0.06693331846298643 0.4402277180439315 1.5642157834751236 0.009503426852361288 0.018123863157456996 4.111352007675518e-08 7.386015337997948 -0.07906980070335101 SRS(ph)FDYNYR ddPTM_A549_PD325901_60min_R1 1 SRSFDYNYR 9 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4 O75494-2;Q5JRI1 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.032)RS(0.968)FDYNYR 168.05 6.211e-08 75500000.0 3893.7 3961.8 3801.0 4038.7 4557.5 3252.0 3388.0 3817.8 4318.2 3880.3 4061.2 True False 4288.985557609558 4295.674789938307 4058.9587172698025 4288.1613264468015 4237.396922521456 3225.5167901971618 3516.9321939847364 3741.6509839938412 4136.7210709450055 3635.29719578386 3561.6981460679212 1.20419681334999 1.2060749153267492 1.1396133391457812 1.2039653981292289 1.189712532826371 0.9056120586069596 0.9874312897254907 1.0505244494468422 1.16144628244589 1.020664033474367 1.0 11.798349537871983 -7.115551233166944 18.896337384838205 1.057392606478442 1.1878873550347175 0.5959118447255318 0.06511666770834058 2.8213653304621764 451.61292616306406 0.01192289233177305 0.020651192641760963 7.66388124998525e-08 7.115551233166944 0.13049474855627552 SRS(ph)FSGLIK ddPTM_A549_MK2206_60min_R1 1 SRSFSGLIK 9 1 Q14CB8-6;Q14CB8-7;Q14CB8;Q14CB8-2;Q14CB8-4;Q14CB8-3 Q14CB8-6 ARHGAP19 Rho GTPase-activating protein 19 1 S(0.151)RS(0.849)FSGLIK 93.01100000000001 0.00027568 8486900.0 1915.2 2073.3 1678.4 1726.5 3028.1 2309.1 2348.4 2699.6 4012.3 4027.4 3742.2 True False 2238.438937855579 2178.8221142196994 1916.4223579116535 2149.4925775055294 2582.6705012998145 2553.447429343473 2775.073881818029 3082.2765671782636 3103.5204563265006 3117.6075428492218 2812.908460534184 0.7957738295651786 0.7745798147323754 0.6812956712952245 0.7641530492952234 0.918149501676053 0.9077605848782443 0.9865496587439713 1.0957614193363852 1.1033137053230406 1.1083217198817674 1.0 11.457846888974066 -7.252764808896389 1.1312738625774816 1.0522071399705808 0.746632348933897 0.8766054745546349 0.050658146170288805 0.12957829345365077 0.3265202014105206 0.00944180775516736 0.020492749330926072 5.587727147980133e-08 7.252764808896389 -0.30557479103668383 SRS(ph)FSGLIK ddPTM_A549_PD325901_60min_R1 2 SRSFSGLIK 9 1 Q14CB8-6;Q14CB8-7;Q14CB8;Q14CB8-2;Q14CB8-4;Q14CB8-3 Q14CB8-6 ARHGAP19 Rho GTPase-activating protein 19 1 S(0.171)RS(0.829)FSGLIK;S(0.202)RS(0.798)FSGLIK 98.156 0.00023492 16573700.0 2694.1 3099.0 3180.3999999999996 3257.0 3503.3 3007.9 3333.0 3281.8999999999996 3114.2 3466.4 2979.7 True False 2967.6030487084035 3360.1636059414463 3396.241069298839 3458.177492816315 3257.2402937288903 2983.4046596660655 3459.839138887582 3216.439929899256 2983.3210039222195 3247.5309124204737 2613.2157898745654 1.1356134691237454 1.2858347247713264 1.299640497527324 1.323341725630055 1.2464490327778244 1.1416602759044514 1.3239775881859548 1.230835946408255 1.141628263338107 1.2427335411808282 1.0 11.351610546758888 -9.455774310152668 0.607615540066724 1.0095808723112085 1.2617456791954456 0.06392034908784894 0.09274997470912864 0.27422679020577273 0.2249904804382159 0.027845178529398593 0.016492570663930683 3.5012707032139564e-10 9.455774310152668 0.25216480688423704 SRS(ph)FTLDDESLK ddPTM_A549_MK2206_60min_R1 4 SRSFTLDDESLK 12 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.012)RS(0.988)FTLDDESLK;S(0.005)RS(0.99)FT(0.005)LDDESLK;S(0.351)RS(0.649)FTLDDESLK;S(0.35)RS(0.65)FTLDDESLK 216.05 2.4866e-32 618894000.0 14426.199999999999 16843.0 14601.5 15644.9 18718.0 16460.6 14160.099999999999 16634.4 19776.8 22963.9 20855.5 True False 16860.989873272843 17700.236757730374 16672.21226111 19477.901202326248 15964.606995584667 18202.449766338024 16732.806878696756 18992.377140713485 15297.386377060033 17776.339040878793 15676.503767481869 1.075558053208776 1.1290933884407557 1.0635159796085114 1.2424901298929742 1.018378028186388 1.1611294224988982 1.067381294125416 1.2115186793186505 0.9758162026402694 1.1339479328134798 1.0 13.936316219631431 -8.78573019534917 24.990581896699016 0.9885798479965009 1.1196394465461526 0.11784791147408025 0.07678062784701346 125.42015032380216 129032.63943492754 0.009688442674459771 0.010316556656039082 1.637833706620997e-09 8.78573019534917 0.13105959854965166 SRS(ph)FTLDDESLK ddPTM_A549_PD325901_60min_R1 6 SRSFTLDDESLK 12 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.008)RS(0.992)FTLDDESLK;S(0.003)RS(0.881)FT(0.116)LDDESLK;S(0.014)RS(0.986)FTLDDESLK;S(0.084)RS(0.87)FT(0.046)LDDESLK;S(0.42)RS(0.58)FTLDDESLK;S(0.079)RS(0.921)FTLDDESLK 207.21 2.6719e-26 729786000.0 32795.5 30850.4 32615.300000000003 33288.6 36400.2 33943.1 34797.5 37496.9 36099.7 43613.399999999994 47757.7 True False 36124.87501722892 33450.271477488226 34828.77038973162 35344.761218104104 33843.57552587287 33666.678647398934 36121.73790442264 36748.994913751 34582.555149088344 40859.642480890594 41883.80566100365 0.8625022117047821 0.7986445106785616 0.8315569667099115 0.8438765451300002 0.8080348715155862 0.8038113565870315 0.8624273113284487 0.8774034339474202 0.8256784359327402 0.9755475137956097 1.0 15.354104914435506 -10.98269575386133 0.5014309928029803 1.0522397551890823 0.8278401393578899 0.8492216476522763 0.024851379108082813 0.4841632811363293 0.13916581042749057 0.05497656058536853 0.0057051868642654865 1.0406489398719417e-11 10.98269575386133 -0.2243996158311924 SRS(ph)GEGEVSGLMR ddPTM_A549_MK2206_60min_R1 4 SRSGEGEVSGLMR 13 1 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 S(0.18)RS(0.819)GEGEVS(0.001)GLMR;S(0.117)RS(0.658)GEGEVS(0.225)GLMR;S(0.258)RS(0.742)GEGEVSGLMR;S(0.055)RS(0.945)GEGEVSGLMR 205.08 1.5924e-31 137238000.0 13768.000000000002 16254.3 13293.600000000002 12302.300000000001 18811.8 14073.400000000001 13565.0 13434.7 21836.2 19776.600000000002 21531.800000000003 True False 16091.701804717854 17081.574442271376 15178.832374365094 15316.36405227123 16044.609139840775 15562.637846833148 16029.58491179592 15339.1098670432 16890.33556524605 15309.052324554781 16184.85981255142 0.9942441263679453 1.05540453486193 0.937841448746677 0.9463390001310565 0.9913344524243651 0.961555307063226 0.99040616338023 0.9477443762069327 1.0435886230010796 0.9458872367051677 1.0 13.982357249043847 -8.76799602223915 24.999968094866755 1.020583515525386 0.9785829707896877 0.0 0.03922217985698647 162.5314205300591 619718.0996980596 0.005888446709792251 0.006339200175649628 1.706098015309919e-09 8.76799602223915 -0.04200054473569825 SRS(ph)GEGEVSGLMR ddPTM_A549_PD325901_60min_R1 4 SRSGEGEVSGLMR 13 1 Q13263;Q13263-2;M0R0K9 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 S(0.081)RS(0.919)GEGEVSGLMR;S(0.412)RS(0.575)GEGEVS(0.013)GLMR;S(0.221)RS(0.779)GEGEVSGLMR;S(0.313)RS(0.679)GEGEVS(0.008)GLMR 148.19 3.4475e-13 141432300.0 25962.8 26361.3 25428.5 27257.5 31086.8 30435.6 27819.899999999998 28163.3 29906.5 30425.500000000004 33476.0 True False 28598.52434319682 28582.85926599041 27154.23092399243 28941.13386872602 28903.370411637978 30187.74256449101 28878.6015181334 27601.560887818567 28649.633807655217 28504.428737551687 29358.66422184818 0.9741084991841803 0.9735749232323577 0.9249137058417238 0.9857782918879722 0.9844920120762382 1.0282396479750548 0.9836483465294199 0.9401504332502292 0.9758493639616848 0.9709034621656667 1.0 14.841498708617655 -6.291435097433999 0.0037224703789568198 1.9426019303564483 7.368508743175518e-09 0.0044514053147637345 0.0259817268394999 41332.72164937856 32.02867545009095 8191.799720235165 8524.522615264106 5.111694643759514e-07 6.291435097433999 -1.9426019229879397 SRS(ph)GS(ph)RGRDS(ph)PYQSR ddPTM_A549_MK2206_60min_R1 1 SRSGSRGRDSPYQSR 15 3 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 3 S(0.515)RS(0.594)GS(0.898)RGRDS(0.908)PY(0.032)QS(0.053)R 40.756 0.041321 17575000.0 487.64 411.3 556.2 400.25 585.01 483.12 531.51 528.1 562.59 844.94 1350.6 True False 569.9417103466449 432.2334131956603 635.0775235167199 498.3112679679052 498.95580395806076 534.2434377308989 628.078487023122 602.959792238421 435.16426327162156 654.0674671636845 1015.2087453362911 0.5614034679713578 0.42575816567900193 0.6255634877400001 0.49084611441446757 0.49148099467246026 0.526239987771115 0.6186693031442208 0.5939269091291058 0.4286451089696553 0.6442689448533292 1.0 9.987560686848695 -10.827339472797307 0.8890497126464408 1.0240278560746159 0.5242553252068417 0.34937624347642293 0.12158909180795785 0.17508953994619517 0.22565984524829097 0.0606146249251957 0.012347692510156438 1.4881973511617092e-11 10.827339472797307 -0.4997725308677742 SRS(ph)GSS(ph)PGLR ddPTM_A549_MK2206_60min_R1 1 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.255)RS(0.745)GS(0.046)S(0.955)PGLR 91.62 0.00018543 8937600.0 837.11 641.16 631.85 520.8 782.16 773.15 554.02 686.18 851.11 940.79 1123.2 True False 978.3937026254608 673.7923053842194 721.4558310572443 648.3960233796004 667.1053001210865 854.9642198245664 654.6782626489626 783.4481163381172 658.3349439433865 728.264885592968 844.2784412570135 1.1588519317972497 0.7980688271289222 0.8545235739800445 0.7679883693515005 0.7901484480971221 1.0126566995500244 0.775429325986623 0.9279499251119946 0.779760457892561 0.8625885134632629 1.0 9.721575064977944 -11.044407958359512 1.3485629406782424 0.9998902135432582 0.8579867598914166 0.0 0.1227161390091691 0.6049763699354409 1.9639936272267902 0.07751443137466198 0.017378544486150654 9.028010211665439e-12 11.044407958359512 -0.14190345365184165 SRS(ph)GSS(ph)PGLR ddPTM_A549_PD325901_60min_R1 1 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.377)RS(0.623)GS(0.104)S(0.896)PGLR 71.558 0.00074707 16613000.0 644.46 555.55 708.88 490.47 737.1 648.68 471.99 753.47 679.13 661.51 874.26 True False 709.885104773623 602.3681482028945 756.988859641731 520.7652179618105 685.328638856954 643.3973651491688 489.9518377328383 738.4414497642201 650.588527838192 619.7421457059972 766.731562390757 0.9258587223931669 0.7856310836150289 0.9872932024362645 0.6792014878558083 0.8938312604740317 0.8391429239497876 0.639013524114114 0.9631029763033035 0.8485219074712177 0.8082909014121842 1.0 9.582577759167584 -10.434989917030485 0.6098623962352648 1.0109281568840525 0.8330561936854839 0.0 0.11684525647019638 0.9642188128041955 0.59619282231419 0.08926819851992712 0.02097959220235848 3.672908277517879e-11 10.434989917030485 -0.17787196319856857 SRS(ph)GSSPGLR ddPTM_A549_MK2206_60min_R1 3 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.167)RS(0.788)GS(0.037)S(0.008)PGLR;S(0.107)RS(0.893)GSSPGLR;S(0.146)RS(0.823)GS(0.016)S(0.016)PGLR 113.61 2.8708e-05 29689100.0 3662.7 3771.9 3437.5600000000004 2974.85 3076.89 2168.81 2385.39 1869.56 3613.96 5695.400000000001 5610.299999999999 True False 4280.874215582514 3963.8735989124993 3925.057698202327 3703.6883835460926 2624.283556931536 2398.3120346604383 2818.7844860117116 2134.575855287373 2795.403830308232 4408.8051843729145 4217.107673597064 1.0151209186297725 0.9399507685634777 0.9307463792724014 0.878253217657817 0.622294653124923 0.56871017301172 0.668416531941992 0.506170584320567 0.6628722922608798 1.0454571060577968 1.0 12.042038142461582 -6.5313133748710595 23.41382582356778 0.7643022478145914 0.9505337696958167 0.284614734756623 0.16062746410162498 119.904665081154 332844.98448390287 0.026999443796377153 0.05629820925075427 2.9422977870354535e-07 6.5313133748710595 0.18623152188122527 SRS(ph)GSSPGLR ddPTM_A549_PD325901_60min_R1 1 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.048)RS(0.885)GS(0.048)S(0.019)PGLR 64.64 0.0049446 7895200.0 1894.0 1908.2 1922.0 2011.2 2586.7 2361.7 2244.6 2059.1 2486.0 2635.5 2673.4 True False 2086.277485710893 2069.0107108284815 2052.4384779249035 2135.4272562333963 2405.019115630556 2342.4670982191387 2330.019481292248 2018.0296351673 2381.522065297873 2469.094080222755 2344.588748078888 0.8898266220122184 0.8824621002398779 0.8753938103672267 0.910789688802834 1.0257743997113282 0.9990950865641203 0.993786003281566 0.8607179561109963 1.0157525780370853 1.0531032712009236 1.0 11.195119174081253 -6.633623399153824 4.910035800148285 0.995561561738517 0.884140583324478 0.5429635200424163 0.04580068804683033 0.11562422878086845 4.519512699236136 0.006315506598897574 0.013394524126354198 2.3247518438856445e-07 6.633623399153824 -0.11142097841403897 SRS(ph)IDKDR ddPTM_A549_MK2206_60min_R1 1 SRSIDKDR 8 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.071)RS(0.929)IDKDR 46.606 0.0080709 2698400.0 616.28 659.11 568.54 617.39 416.51 322.74 409.15 552.95 629.41 640.87 797.98 True False 720.2929974006037 692.6558837135706 649.1675210719092 768.6505777156905 355.2419307474606 356.89213258252653 483.4872588766164 631.3323558383539 486.84963996123486 496.09702189645475 599.8195428723924 1.200849498753063 1.1547737847896837 1.0822713744257166 1.2814697134321542 0.5922480102036888 0.5949991740406714 0.8060545286025719 1.0525371561170784 0.8116601830441008 0.8270771230973314 1.0 9.22838471755953 -6.739852335381183 24.99683427103094 0.8692497811945056 1.1710813341534259 0.579538201410774 0.1455232501916052 176.26652755925366 204107.73035168956 0.02326491659123968 0.04839579634368128 1.8203196809329416e-07 6.739852335381183 0.3018315529589203 SRS(ph)KDEYEK ddPTM_A549_PD325901_60min_R1 1 SRSKDEYEK 9 2 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.072)RS(0.926)KDEY(0.003)EK 53.448 0.018821 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SRS(ph)LGPGAGPR ddPTM_A549_MK2206_60min_R1 1 SRSLGPGAGPR 11 1 P78549-3;P78549-2;P78549;H3BUV2 P78549-3 NTHL1 Endonuclease III-like protein 1 1 S(0.18)RS(0.82)LGPGAGPR 105.19 5.0174e-05 15184000.0 830.13 1096.2 802.56 733.11 1020.1 573.14 455.89 872.34 1386.2 1385.2 1810.2 True False 970.235649270077 1151.9918977512343 916.3750760042764 912.7219829105586 870.044641318299 633.7892943804588 538.7193118642571 995.9968664292069 1072.227913306532 1072.282357936819 1360.6773810215864 0.7130534120745297 0.846631180777274 0.6734697649756395 0.6707850043228424 0.6394202280816016 0.46578954219450214 0.39591994353561655 0.7319860536532325 0.7880103897233239 0.7880504026103214 1.0 10.410109326541242 -9.4167267025065 0.9810771918237693 0.9552357007270413 0.6394448706242999 0.3445917120962734 0.12932997995007772 0.2804147567398281 0.5690313063508975 0.03740177360907549 0.028054662432510757 3.8306572719723297e-10 9.4167267025065 -0.31579083010274145 SRS(ph)LGPGAGPR ddPTM_A549_PD325901_60min_R1 1 SRSLGPGAGPR 11 1 P78549-3;P78549-2;P78549;H3BUV2 P78549-3 NTHL1 Endonuclease III-like protein 1 1 S(0.189)RS(0.811)LGPGAGPR 87.083 8.6053e-05 14083000.0 3472.7 3071.4 3306.8 2957.3 3493.4 3154.3 2746.0 2931.5 3175.7 3561.2 3834.0 True False 3825.2459475333794 3330.2376570792358 3531.2193334037847 3139.9657044843975 3248.0356355757453 3128.612426604832 2850.500532668856 2873.028932782738 3042.2363727942316 3336.345224241807 3362.44230572846 1.1376391324295616 0.990422244987116 1.0501947728256291 0.9338348197484199 0.9659751276749629 0.9304583222958915 0.84774704619097 0.8544470570953954 0.9047698357861171 0.9922386530046353 1.0 11.715293798144426 -4.844908461273892 0.7603372470405024 0.9367173969381585 1.3679268641305604 0.5698210001010182 0.05285437809917296 2.9564986297701314 0.7877633500257663 0.009607800087048951 1.255775293133433 1.4291951663867828e-05 4.844908461273892 0.43120946719240194 SRS(ph)LGR ddPTM_A549_MK2206_60min_R1 1 SRSLGR 6 1 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 S(0.008)RS(0.992)LGR 64.268 0.048877 45941000.0 2534.7 2473.9 2043.5 1677.3 2638.8 2062.3 2175.3 2534.3 2792.8 3628.4 3506.6 True False 2962.4953925347395 2599.810943118752 2333.29902787921 2088.238575296858 2250.636015597222 2280.5312171560536 2570.5238524607203 2893.544785968246 2160.2352591851695 2808.741919966758 2635.814442763393 1.1239392820948555 0.9863406546908156 0.8852288651370218 0.7922555326419506 0.8538673963853278 0.8652093182876486 0.9752294436044512 1.0977801544082322 0.8195703097067694 1.06560684788648 1.0 11.364033095096158 -5.37592194698295 2.8272979874294 0.9126624694839018 1.137481228039091 0.25062988960980825 0.09497811094347966 0.31912563654201126 3.9256042800535225 0.013157470456114734 0.14278787751196423 4.2080224973174645e-06 5.37592194698295 0.22481875855518907 SRS(ph)LSSSGTK ddPTM_A549_MK2206_60min_R1 3 SRSLSSSGTK 10 1 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 S(0.013)RS(0.978)LS(0.007)S(0.001)SGTK;S(0.202)RS(0.798)LSSSGTK;S(0.025)RS(0.963)LS(0.006)S(0.006)S(0.001)GTK 61.235 0.0021337 23071200.0 3252.84 4107.5 3505.73 3513.54 5968.4 4800.3 4958.1 4755.3 7810.699999999999 8163.7 8597.7 True False 3801.8398676974407 4316.554205449001 4002.895229266935 4374.357457728805 5090.456266291672 5308.2645598187455 5858.9225913140735 5429.378337495482 6041.588921124895 6319.514500064111 6462.653805551478 0.5882784351579572 0.6679228588325498 0.6193887758351548 0.6768670563741465 0.787672745508807 0.821375354387527 0.906581532540271 0.8401159184531278 0.9348464427933793 0.9778513115828038 1.0 12.65791099538806 -7.029885565505044 0.39065936835769327 0.992974303025865 0.5311239564899645 0.9449419885934467 0.032682589700592124 0.26174956884227224 0.06447389547589029 0.010762940038122264 0.04719796985585604 9.33500241190992e-08 7.029885565505044 -0.4618503465359005 down SRS(ph)LSSSGTK ddPTM_A549_PD325901_60min_R1 4 SRSLSSSGTK 10 1 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 S(0.155)RS(0.843)LS(0.001)SSGTK;S(0.007)RS(0.959)LS(0.006)S(0.008)S(0.01)GT(0.009)K;S(0.175)RS(0.815)LS(0.009)S(0.001)SGTK;S(0.057)RS(0.936)LS(0.003)S(0.003)SGTK 64.104 0.0017329999999999997 74783000.0 10177.6 11112.8 10534.1 10941.7 12986.3 12468.5 12297.2 12071.0 11308.1 11702.9 14532.9 True False 11210.822459646874 12049.314656374985 11249.007372689255 11617.543958596325 12074.18708830288 12366.960669917995 12765.176675286037 11830.234435483699 10832.859881977025 10963.97689677059 12745.44543164348 0.8795944025473951 0.9453819971218745 0.8825903679098593 0.9115055272806015 0.9473334732049421 0.9703043127244646 1.001548101535437 0.9281930944612135 0.8499396855195014 0.8602270478166273 1.0 13.63769417352892 -6.65675083658813 5.903806974980574 0.937292172826046 0.9053679158528875 0.09303051329719392 0.048333444998017554 0.5433624434086323 26.75020931038783 0.008560677054198407 0.017960485477322898 2.2041906885520996e-07 6.65675083658813 -0.03192425697315859 SRS(ph)MLEVPR ddPTM_A549_PD325901_60min_R1 1 SRSMLEVPR 9 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 S(0.435)RS(0.565)MLEVPR 63.473 0.0015267999999999998 8988500.0 1284.3 1463.6 1458.5 1109.5 1604.3 1372.8 1618.9 1575.8 1623.7 1899.8 1927.0 True False 1414.6811905483103 1586.9427085046457 1557.4825806729823 1178.031295142677 1491.6195025345428 1361.6203719503894 1680.5081253960723 1544.3694328088152 1555.461535568848 1779.8463037781046 1689.9912162594524 0.8370938126409316 0.9390242347040777 0.9215921157982356 0.6970635609278943 0.8826196776549075 0.8056967153735487 0.994388674466386 0.9138328163782119 0.9203962249056145 1.0531689671840623 1.0 10.722800032771996 -7.764187809517651 24.999920558075004 0.9592188506501439 0.8495259041223322 0.44487345320401084 0.07065457511187744 57.51222380027165 523137.6935842273 0.010438604800967274 0.014776094960517643 1.7211241183858373e-08 7.764187809517651 -0.1096929465278117 SRS(ph)PAPPADK ddPTM_A549_PD325901_60min_R1 1 SRSPAPPADK 10 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.389)RS(0.611)PAPPADK 54.44 0.0053479999999999995 30496000.0 5704.5 4361.3 5140.8 4870.6 5445.7 5485.2 5138.6 5315.3 5126.2 5385.6 6123.1 True False 6283.616640569057 4728.842056983681 5489.685602141699 5171.445900064827 5063.212818645113 5440.53034981226 5334.1522349498155 5209.2821717278175 4910.763640840691 5045.552296887751 5369.997517528931 1.1701339935554642 0.8806041420964593 1.0222882942165388 0.9630257524671129 0.9428706069449007 1.0131346117112892 0.9933248977374556 0.970071616369188 0.9144815476749862 0.9395818676671424 1.0 12.390705705936178 -5.246348894056139 24.88497915997769 0.9643959913144575 1.1701341504729459 0.6767939034891204 0.04096251313202843 1214.5293014051335 2002787.3056744407 0.005815752992889124 0.18613756561324024 5.670888468592248e-06 5.246348894056139 0.20573815915848837 SRS(ph)PAPPADKEAEKPVFFPAFAAEAQK ddPTM_A549_MK2206_60min_R1 1 SRSPAPPADKEAEKPVFFPAFAAEAQK 27 3 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8 C9J0Q5 NCOR2 1 S(0.352)RS(0.648)PAPPADKEAEKPVFFPAFAAEAQK 106.94 2.7855e-13 99810000.0 1873.2 2102.4 2460.0 2158.6 2879.5 2201.3 1897.4 2077.0 3040.9 2741.0 2690.4 True False 2189.350364656992 2209.40317992355 2808.8649907427716 2687.4570969032375 2455.9293644505847 2434.240104895321 2242.1330196565864 2371.4211105457293 2352.1410053194563 2121.806196292823 2022.2994287374174 1.0826044519153475 1.0925203006673185 1.3889461426077891 1.3289115640907332 1.2144241992808629 1.203699150731151 1.108704768342054 1.1726359988274728 1.1631022448480683 1.0492047647056553 1.0 10.981780908199966 -10.291239916522898 0.38653503106251313 0.9589248842927152 1.2212148829769873 0.3672280074430344 0.08872790302775117 1.4493688102006075 0.3462457447709974 0.1536375796145713 0.0335080191769164 5.113992461225963e-11 10.291239916522898 0.26228999868427216 SRS(ph)PAPPADKEAEKPVFFPAFAAEAQK ddPTM_A549_PD325901_60min_R1 1 SRSPAPPADKEAEKPVFFPAFAAEAQK 27 3 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8 C9J0Q5 NCOR2 1 S(0.173)RS(0.827)PAPPADKEAEKPVFFPAFAAEAQK 224.71 5.4672999999999985e-96 39150000.0 3972.9 3725.5 2973.0 4202.8 4160.7 4154.4 4494.5 4268.6 4256.1 4190.4 4444.0 True False 4376.2258833056 4039.460959643387 3174.7656581013207 4462.397410748662 3868.46678563577 4120.56794378693 4665.540656984769 4183.459424348081 4077.2309179864374 3925.8174288618607 3897.416172837055 1.1228531132511836 1.0364458863275392 0.8145821532295604 1.144963024952077 0.9925721591132487 1.0572563362632725 1.1970855690242008 1.0733930478106488 1.0461369115268204 1.007287201254705 1.0 11.928302277865367 -5.265936508690816 7.630067763478934 1.032142106295413 1.123682373662114 0.06511579585312943 0.09196006540225982 0.19202162473987155 115.75537451706147 0.01196726344885875 0.09186032444547554 5.420801335490941e-06 5.265936508690816 0.09154026736670096 SRS(ph)PAPPADKEAFAAEAQK ddPTM_A549_PD325901_60min_R1 1 SRSPAPPADKEAFAAEAQK 19 2 Q9Y618;Q9Y618-4;Q9Y618-5 Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 S(0.139)RS(0.861)PAPPADKEAFAAEAQK 88.22200000000001 2.0765e-06 6799200.0 3848.7 3347.9 4046.1 3512.8 4272.9 4156.1 3926.3 4256.8 4833.1 4992.9 4724.1 True False 4239.417190736809 3630.039282456073 4320.692677175835 3729.7776778523644 3972.786244704758 4122.254099550562 4075.717495053801 4171.894784605002 4629.981614557986 4677.647441906356 4143.065648537247 1.0232560983516106 0.8761722816865565 1.0428733319012942 0.9002458551843612 0.9589001434499093 0.994976775472039 0.9837443672882122 1.0069584067725148 1.117525525136839 1.1290304906362874 1.0 12.016482965242002 -8.406020998840825 3.020716079195312 1.0555775069215483 0.9653612563994067 0.40752865432435725 0.056870552393429114 0.22936542053092923 4.019281766891875 0.00980716813407463 0.011916124159146856 3.9262595084070194e-09 8.406020998840825 -0.09021625052214155 SRS(ph)PASAEAPGDSGER ddPTM_A549_MK2206_60min_R1 1 SRSPASAEAPGDSGER 16 1 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.138)RS(0.837)PAS(0.025)AEAPGDSGER 45.864 0.029445999999999996 2330200.0 0.0 183.9 269.08 229.2 400.05 157.36 116.78 0.0 328.39 284.69 352.61 True False 0.0 193.2597244995913 307.23959012563637 285.3540102891789 341.20317494303043 174.0117307528859 137.9974143751956 0.0 254.01018933107184 220.3783312742081 265.047205459077 0.0 0.7291520926049921 1.1591881891132552 1.076615804324099 1.2873298337631853 0.6565310901938678 0.5206522141449337 0.0 0.9583583003303565 0.8314682318287422 1.0 8.050105519324912 -8.958803208948199 24.999980274055094 0.981630407963627 0.7086325015589354 0.06610437949597181 0.3976043152933612 285.8592906569931 173472.4317619911 0.07173278181290385 0.07628620778428227 1.099503942750726e-09 8.958803208948199 -0.27299790640469157 SRS(ph)PASAEAPGDSGER ddPTM_A549_PD325901_60min_R1 2 SRSPASAEAPGDSGER 16 1 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.092)RS(0.908)PASAEAPGDSGER;S(0.054)RS(0.939)PAS(0.007)AEAPGDSGER 108.69 1.7169e-07 21878000.0 1585.0700000000002 1992.7399999999998 1688.6799999999998 1712.06 1914.76 1548.31 1957.8400000000001 2137.61 1926.3700000000001 1880.8100000000002 2300.25 True False 1745.9851395331398 2160.675193321638 1803.2839796577666 1817.8100578296264 1780.273863163399 1535.7010767005447 2032.3466725711562 2094.973691627395 1845.4113680321252 1762.0553356189573 2017.3338324861463 0.8654914280505579 1.0710548539498983 0.893894679511429 0.9010953113245375 0.8824884778586217 0.7612528238858508 1.0074419215319004 1.0384863714130874 0.9147773850388732 0.8734574849455701 1.0 10.97823412846445 -11.838989129119147 0.34017182301583604 1.0700395250569283 0.9198873680948876 0.0 0.09029979729544414 12.03419865255305 0.9760747835092447 0.7435606749789032 0.028985766040520146 1.4488081183926326e-12 11.838989129119147 -0.15015215696204076 SRS(ph)PATAK ddPTM_A549_PD325901_60min_R1 2 SRSPATAK 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.186)RS(0.811)PAT(0.003)AK;S(0.198)RS(0.8)PAT(0.002)AK 57.148999999999994 0.0048233 39192000.0 9285.400000000001 7734.3 7442.5 5898.4 7471.8 5896.6 5056.0 6162.1 6354.1 8418.3 9879.5 True False 10228.046972449802 8386.096604528213 7947.592805388187 6262.730771761664 6947.00654431066 5848.580044611496 5248.4088467493575 6039.192081426067 6087.059273977962 7886.767101323936 8664.384131310462 1.1804701658469567 0.967881441708407 0.9172715203920833 0.722813148268675 0.8017888448881532 0.675013937052548 0.6057451709444871 0.6970134276021136 0.7025380202132512 0.9102513210169834 1.0 13.080881490218175 -5.421520010025829 1.4415807340851907 0.8032732306388485 1.258076893678448 0.5425704871318651 0.11263674865478047 0.7392732276392491 1.7083276080277328 0.0214858684122582 0.4403161151720445 3.788610774027776e-06 5.421520010025829 0.4548036630395996 SRS(ph)PAVNGENK ddPTM_A549_PD325901_60min_R1 2 SRSPAVNGENK 11 1 Q8IZD2-6;Q8IZD2-5;Q8IZD2-7;Q8IZD2;Q8IZD2-8;Q8IZD2-2 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 S(0.468)RS(0.532)PAVNGENK;S(0.227)RS(0.773)PAVNGENK 94.45 8.0189e-05 21593000.0 4694.1 4025.5 4326.6 4466.0 5702.0 4617.4 4818.200000000001 4305.9 4756.299999999999 4982.6 5511.299999999999 True False 5170.64157638622 4364.743012493478 4620.229093959361 4741.854676978092 5301.5111908321105 4579.797425294091 5001.55923762021 4220.015446586795 4556.409251478793 4667.997785664164 4833.445039009195 1.0697631885033592 0.9030294080654746 0.955887375706347 0.9810507078715273 1.0968390346937438 0.9475223962064335 1.0347814441364738 0.8730864657668381 0.9426835755254203 0.9657703248904749 1.0 12.238836121557263 SRS(ph)PAYSR ddPTM_A549_MK2206_60min_R1 1 SRSPAYSR 8 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.018)RS(0.982)PAYSR 63.733999999999995 0.0081008 7413300.0 794.78 850.26 719.05 789.04 985.99 917.78 523.07 748.15 1177.3 1002.0 1263.6 True False 928.9194334946 893.5346022459082 821.0221022738176 982.3548354213517 840.9521771330554 1014.8988704269414 618.1050482722519 854.2025536132833 910.6434297617803 775.6475040807768 949.8132464141399 0.9780021883265778 0.9407476739446389 0.8644037187030696 1.0342610393464895 0.8853868697956455 1.0685246539343616 0.6507648220382307 0.899337376940342 0.9587605070783771 0.8166315925884414 1.0 9.891500066420257 -9.038957243454442 2.8776974596705163 0.9839806782841186 0.9141823761774502 0.0 0.1146161283681928 0.467919741890692 7.9564615923710225 0.018705653641551977 0.01863811915458774 9.14203240883282e-10 9.038957243454442 -0.06979830210666838 SRS(ph)PDSSGSR ddPTM_A549_MK2206_60min_R1 1 SRSPDSSGSR 10 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.064)RS(0.907)PDS(0.018)S(0.005)GS(0.005)R 42.976000000000006 0.060048000000000004 2631800.0 407.57 137.79 208.97 0.0 214.56 0.0 174.7 110.96 111.04 481.5 355.29 True False 476.35785187019525 144.802922451325 238.60508825834034 0.0 182.9985082259133 0.0 206.44072864657196 126.68891980074828 85.88961729444327 372.7288155837265 267.06168749483993 1.78369970001556 0.5422077715813236 0.8934455948981846 0.0 0.685229356342808 0.0 0.7730076544602106 0.4743807357361812 0.32160965543252173 1.3956656197303787 1.0 8.06102921245032 -5.260041940813866 24.557420335937987 0.5893726525585049 1.783700204579987 0.4189653707237391 0.3972586539485684 60.233326355431 1058342.185879605 0.04720066486201249 0.40880155869345836 5.494878059979346e-06 5.260041940813866 1.1943275520214822 SRS(ph)PDSSGSR ddPTM_A549_PD325901_60min_R1 1 SRSPDSSGSR 10 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.228)RS(0.748)PDS(0.008)S(0.008)GS(0.008)R 45.077 0.041415 5172300.0 302.8 401.79 335.29 383.63 332.99 265.98 233.47 232.7 320.18 202.44 378.77 True False 333.5400330904215 435.6502533821275 358.0447956625606 407.3259538130555 309.6019311531366 263.81394706538805 242.35482860968614 228.05861595038152 306.72394805594257 189.65790385137348 332.1836912208575 1.0040831079472299 1.3114739371490658 1.0778518185123933 1.226206958914905 0.9320202626904189 0.7941809126625281 0.7295807561141006 0.6865436864531475 0.9233564324866641 0.5709428513914504 1.0 8.375837434741605 -6.808850400169649 7.542908378616309 0.9084067980677278 1.1604012381841764 0.4620374488164145 0.15828618531807465 0.16108223270574362 21.526612785117727 0.019830739256879653 0.037822402373930725 1.5529218471399638e-07 6.808850400169649 0.25199444011644856 SRS(ph)PFSTTR ddPTM_A549_MK2206_60min_R1 1 SRSPFSTTR 9 1 K7EPI8;Q8NG27-2;Q8NG27-3;Q8NG27 K7EPI8 PJA1 E3 ubiquitin-protein ligase Praja-1 1 S(0.19)RS(0.809)PFS(0.001)TTR 109.72 0.00010909 23826000.0 2004.1 1531.2 1482.8 1847.1 2127.9 1895.0 1272.9 1619.3 2314.9 3007.6 2432.4 True False 2342.343084459256 1609.1315397160097 1693.0833366964976 2299.6395829194707 1814.8887288120845 2095.527642200805 1504.1694533155203 1848.8407338982672 1790.5788461356885 2328.181071131082 1828.3679491751761 1.2811114335689089 0.8800917454508708 0.9260079938834472 1.2577553571516593 0.9926277309940964 1.1461192169476344 0.8226842162673492 1.01119730015631 0.979331784361821 1.2733657206042057 1.0 10.836340718861438 -7.70840932644115 24.999999738547995 0.9804713357062761 1.0685281820402517 0.012369304697696593 0.15392178301390874 168.34980367520546 79364.68134057583 0.0179427286551858 0.026613352903767734 1.9569993146171563e-08 7.70840932644115 0.08805684633397559 SRS(ph)PGRPPK ddPTM_A549_MK2206_60min_R1 1 SRSPGRPPK 9 2 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.356)RS(0.644)PGRPPK 58.676 0.0022374 129120000.0 1165.8 1144.8 914.94 937.36 1695.5 1025.2 1000.6 1111.6 1395.3 1652.5 1595.8 True False 1362.5585389265013 1203.0654301638501 1044.6922498496722 1167.0132420796895 1446.094196015268 1133.6859835273165 1182.3960680238113 1269.172704132226 1079.2667778362452 1279.1991022889065 1199.5188181605608 1.1359209362100369 1.0029566955929279 0.8709261030616324 0.9729011537053516 1.205561908760069 0.9451172973391132 0.9857253176211049 1.0580681894415613 0.8997497675703664 1.066426872944381 1.0 10.228240075602281 -8.754896662125457 24.98772079757063 0.9526596123182556 1.0171573723370544 0.0 0.09485870746275851 284.3438994987016 1085954.9709010702 0.015534094713287027 0.017410770012800607 1.7583419515421686e-09 8.754896662125457 0.06449776001879881 SRS(ph)PIIHS(ph)PK ddPTM_A549_MK2206_60min_R1 1 SRSPIIHSPK 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 S(0.449)RS(0.658)PIIHS(0.893)PK 46.318000000000005 0.010657 23472000.0 2129.8 1673.6 1995.8 1155.1 2114.2 1872.9 1574.2 1532.0 2753.4 2530.5 3053.1 True False 2489.258171389312 1758.7790914764316 2278.834450619686 1438.0995518544084 1803.2039806638038 2071.089034869599 1860.2117632251486 1749.16569155323 2129.7592962762974 1958.8582924914244 2294.931008726662 1.0846766904642033 0.7663755837489366 0.9929860383402517 0.6266417362377856 0.7857334158660865 0.9024624387374235 0.8105741550188401 0.762186612539499 0.9280275913209217 0.8535586843537807 1.0 11.164235067990058 -9.005752538987668 3.3986433989789453 0.9711670377093706 0.8360005135388502 0.06141360731701051 0.12210151108197694 0.24738861249040522 5.871778257697507 0.020380503244022824 0.02062178255051879 9.868416278588154e-10 9.005752538987668 -0.13516652417052044 SRS(ph)PIIHS(ph)PK ddPTM_A549_PD325901_60min_R1 3 SRSPIIHSPK 10 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 S(0.381)RS(0.623)PIIHS(0.997)PK;S(0.395)RS(0.605)PIIHS(1)PK;S(0.409)RS(0.601)PIIHS(0.99)PK 54.858999999999995 0.007444199999999999 121925000.0 8944.1 8611.9 9025.2 8520.0 11852.8 7903.299999999999 7991.999999999999 8654.400000000001 9375.8 10056.699999999999 9789.7 True False 9852.09844770159 9337.655036465676 9637.704344936446 9046.26104967608 11020.300217940172 7838.938145130764 8296.1399333902 8481.781202754546 8981.76773122277 9421.718245712837 8585.628962021361 1.1475103910595803 1.0875912618366006 1.1225391159539917 1.0536515250882994 1.2835751773910344 0.9130301553685124 0.966282140782962 0.9879044669032185 1.046139749452688 1.097382415125313 1.0 13.067708111044576 -7.2793663419472585 24.995836344522218 1.0080490114457268 1.1304658128959493 0.4928064454087948 0.06889353950660376 539.2971871388199 751948.6700093617 0.009305375987214051 0.01489479399953254 5.2557374029226685e-08 7.2793663419472585 0.12241680145022249 SRS(ph)PLAR ddPTM_A549_PD325901_60min_R1 1 SRSPLAR 7 1 Q8N3Y1 Q8N3Y1 FBXW8 F-box/WD repeat-containing protein 8 1 S(0.322)RS(0.678)PLAR 60.828 0.0079441 58199000.0 2278.8 2327.4 2356.7 2265.0 2544.0 2239.9 2292.0 1907.6 2318.8 2473.0 2551.7 True False 2510.1420984361066 2523.5381660110093 2516.639833988358 2404.9039058117755 2365.3182163235515 2221.6589970364794 2379.223314230526 1869.5514215167505 2221.348899844213 2316.854357955179 2237.8570765590252 1.1216722125506569 1.1276583265501714 1.1245757650698565 1.0746458882484153 1.0569567829418816 0.9927617899765733 1.0631703602308993 0.8354203854659972 0.9926232211664762 1.0353004140539759 1.0 11.12790218445994 -6.881334455957588 1.150961173185029 0.9863761315219387 1.1277788175485157 0.5592351064811838 0.053511204416963686 0.2601842308891675 0.6772297117290657 0.008021574363401469 0.021931322172835187 1.3142123499666314e-07 6.881334455957588 0.14140268602657702 SRS(ph)PLELEPEAK ddPTM_A549_MK2206_60min_R1 4 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.212)RS(0.788)PLELEPEAK;S(0.028)RS(0.972)PLELEPEAK;S(0.187)RS(0.813)PLELEPEAK;S(0.028)RS(0.972)PLELEPEAK 160.78 4.4684e-14 1176983000.0 10449.5 10801.9 9874.7 9645.8 12717.400000000001 10295.0 9188.0 9611.8 13464.4 15108.899999999998 14885.2 True False 12213.12013425328 11351.670571354734 11275.08094475109 12009.02143301642 10846.687306637908 11384.410066732074 10857.340668601626 10974.302084902964 10414.73489822858 11695.788996413217 11188.794029379354 1.0915492860253095 1.014557113264191 1.0077119048885128 1.0733079366268898 0.9694241647631417 1.0174832101510738 0.9703763104488827 0.9808297530624676 0.9308183590547594 1.0453127446713741 1.0 13.449766925104669 -7.04921461978528 0.9034060627377769 0.9676744468524292 1.0461128119774714 0.23563389069893526 0.039468234409220565 0.40986894206076885 0.646746603772376 0.006038329796011935 0.016976082963025396 8.928641388060219e-08 7.04921461978528 0.07843836512504221 SRS(ph)PLELEPEAK ddPTM_A549_PD325901_60min_R1 4 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.274)RS(0.726)PLELEPEAK;S(0.04)RS(0.96)PLELEPEAK;S(0.064)RS(0.936)PLELEPEAK;S(0.015)RS(0.985)PLELEPEAK 158.35 6.0498e-14 1792924000.0 25499.5 24542.5 26884.800000000003 26711.3 29416.5 25455.0 25978.600000000002 26654.300000000003 28799.1 28520.0 30415.4 True False 28088.190468260244 26610.78260691125 28709.36419943574 28361.196335236236 27350.386521415796 25247.70291957836 26967.229839035383 26122.659076606164 27588.773978567984 26719.242332746355 26674.49861910625 1.0529978789607466 0.9976113510846137 1.0762850544779112 1.0632325930550706 1.0253383545070807 0.9465108709295136 1.0109741976450668 0.9793120931575892 1.0342752593972606 1.0016773966131103 1.0 14.703173533578456 -6.997262046178491 24.379858647922152 1.0077896342526738 1.0458030096060278 0.3864558005168163 0.028576647093515307 68.37946775368077 608856.5567649503 0.004349916170821082 0.008183511150531054 1.0063242860329108e-07 6.997262046178491 0.03801337535335403 SRS(ph)PLELEPEAKK ddPTM_A549_PD325901_60min_R1 2 SRSPLELEPEAKK 13 2 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.032)RS(0.968)PLELEPEAKK;S(0.044)RS(0.956)PLELEPEAKK 107.98 2.5537e-05 40597000.0 12921.3 13145.400000000001 13894.0 14182.7 17039.5 18444.199999999997 17177.6 18577.199999999997 17953.300000000003 17635.1 20049.5 True False 14233.060863841692 14253.208991785317 14836.930391409274 15058.733167751288 15842.704303083787 18293.996550355027 17831.302967943397 18206.66317246852 17198.78523528251 16521.616776375 17583.538604252157 0.8094537273856679 0.8105995791051137 0.8437966171280973 0.8564108457730855 0.9009963614066061 1.0404047195557704 1.0140906997884558 1.035437950360326 0.9781185472600719 0.9396070465804673 1.0 14.101937814824876 -6.954281045185583 2.4045561300682814 0.9983522439503738 0.8264625033953761 0.8818966255689666 0.02933698212337233 0.061827097514640106 0.7217006548684882 0.0038600178071535977 0.007825844776816113 1.1110125245574122e-07 6.954281045185583 -0.17188974055499773 SRS(ph)PLGFYVHLK ddPTM_A549_PD325901_60min_R1 1 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.237)RS(0.763)PLGFYVHLK 88.319 7.753899999999999e-05 16594000.0 4062.9 3810.3 4363.8 5108.2 5396.7 4379.5 4443.2 4953.4 5188.1 5458.2 5016.6 True False 4475.362617051104 4131.407353249014 4659.953709661134 5423.721912436073 5017.654409604292 4343.834804018598 4612.28840741233 4854.600551132876 4970.062199103739 5113.568320497762 4399.59000284752 1.017222653509655 0.9390437178407688 1.0591790841067237 1.2327789427936944 1.1404822736565785 0.9873271830345929 1.0483450513404993 1.103421125148221 1.1296648541993677 1.1622829211785959 1.0 12.103153370135034 -5.870258773528696 6.648277663368553 1.0764484906252325 0.9791384774461687 0.2544964841101024 0.07209312212160103 0.24712410797816095 13.477809582512053 0.010645337793344022 0.03377144122008683 1.3481593450789613e-06 5.870258773528696 -0.09731001317906385 SRS(ph)PLLK ddPTM_A549_PD325901_60min_R1 1 SRSPLLK 7 1 A0A0U1RQD2;Q6ZUS6-6;Q6ZUS6;Q6ZUS6-5;Q6ZUS6-4 A0A0U1RQD2 CCDC149 Coiled-coil domain-containing protein 149 1 S(0.283)RS(0.717)PLLK 40.724000000000004 0.031616000000000005 6076500.0 1705.8 1187.6 972.54 1438.9 1431.2 1579.1 1534.7 1644.5 2012.6 1761.5 1837.3 True False 1878.9715602564106 1287.683219882562 1038.5424127581095 1527.777585020998 1330.677449371961 1566.240333148937 1593.1038483200632 1611.699157414708 1928.0174210050275 1650.278589380529 1611.3237476043032 1.1661043058851723 0.7991461813909675 0.6445274665021241 0.9481506043043674 0.8258287332700187 0.9720208837470461 0.9886925893624239 1.0002329822364766 1.1965425470030964 1.0241756765728447 1.0 10.65403067450934 -7.841613570158101 1.3485485618495734 1.0895406486942683 0.8639818604046675 0.2606489051879437 0.12969878480259694 0.3429292560962069 1.2640730665385695 0.02326524392712434 0.036045159588582724 1.4400793731134279e-08 7.841613570158101 -0.22555878828960074 SRS(ph)PLLVTVVESDPRPQGQPR ddPTM_A549_MK2206_60min_R1 3 SRSPLLVTVVESDPRPQGQPR 21 2 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 S(0.087)RS(0.912)PLLVT(0.001)VVESDPRPQGQPR;S(0.201)RS(0.799)PLLVTVVESDPRPQGQPR;S(0.181)RS(0.811)PLLVT(0.005)VVES(0.002)DPRPQGQPR 155.16 4.609699999999999e-28 84037000.0 10024.3 11102.4 10824.990000000002 9779.5 16658.3 11381.3 10739.599999999999 11768.2 17165.1 13962.1 14570.4 True False 11716.1567693952 11667.464737815448 12360.13635615472 12175.477939018432 14207.88613711657 12585.661611704492 12690.846304365912 13436.378388600993 13277.232257032128 10808.051912900411 10952.167557417366 1.0697568958813475 1.0653110150705871 1.1285561777023587 1.1116957328481136 1.2972670535426811 1.149148015287699 1.1587520221758316 1.2268236692106844 1.2122926523380397 0.98684135868435 1.0 13.418928803245294 -4.113316725893451 16.027116723059788 1.126187546655415 1.1390250336531351 0.0 0.09087663706572198 0.0 0.0 0.013153252470597813 0.0 7.7034146312505e-05 4.113316725893451 0.012837486997720138 SRS(ph)PLLVTVVESDPRPQGQPR ddPTM_A549_PD325901_60min_R1 1 SRSPLLVTVVESDPRPQGQPR 21 2 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 S(0.269)RS(0.731)PLLVTVVESDPRPQGQPR 145.58 2.3419999999999996e-22 56391000.0 1307.7 1442.0 1208.4 1142.5 1208.8 895.87 1118.9 1555.1 1215.5 1404.0 1194.3 True False 1440.4567413221416 1563.52240069944 1290.409290699508 1213.0696301942392 1123.8980581336123 888.5743317447518 1161.4803517855732 1524.082310547651 1164.4167620151104 1315.351200391861 1047.4086712914705 1.3752576055590957 1.4927529660143004 1.232001725848244 1.1581626765591946 1.07302726141061 0.8483549507463276 1.108908474429041 1.4550980456066256 1.1117119744477266 1.255814694344676 1.0 10.032608738401418 -6.062148234967928 1.976838602657582 1.0764974112282168 1.438145902535104 0.34427374502959385 0.15100808640093188 0.2323157394956506 1.7276986965419656 0.021342510639598786 0.08537937303298786 8.666660116815271e-07 6.062148234967928 0.36164849130688714 SRS(ph)PNRFDAHDPR ddPTM_A549_MK2206_60min_R1 1 SRSPNRFDAHDPR 13 2 Q96T58;A0A669KB49;F6WRY4 Q96T58 SPEN Msx2-interacting protein 1 S(0.228)RS(0.772)PNRFDAHDPR 70.78399999999999 0.00053313 134230000.0 603.95 812.13 787.11 468.82 834.47 559.57 395.17 566.01 1158.4 899.36 1353.8 True False 705.8819948401613 853.4639481123053 898.734033684367 583.6809210461296 711.7205684157251 618.783325987496 466.96727383666763 646.243650832927 896.0242495846826 696.1939513673531 1017.6140970207839 0.6936637345205175 0.8386911606383476 0.883177656751753 0.5735778648850699 0.6994012469947032 0.608072674896187 0.4588844388101379 0.6350576831874687 0.8805147768765452 0.6841433834353947 1.0 9.990974846207829 -8.91468305580679 3.2813904705346393 0.9510531993271427 0.674702261818819 0.1823170352123551 0.13809210513214953 0.14591838610540595 2.980364589416798 0.02279906437880181 0.023725166726455877 1.2170738861590788e-09 8.91468305580679 -0.27635093750832374 SRS(ph)PNRFDAHDPR ddPTM_A549_PD325901_60min_R1 2 SRSPNRFDAHDPR 13 2 Q96T58;A0A669KB49;F6WRY4 Q96T58 SPEN Msx2-interacting protein 1 S(0.254)RS(0.746)PNRFDAHDPR;S(0.217)RS(0.783)PNRFDAHDPR 68.243 0.00081129 324530000.0 8492.4 9516.7 8742.7 9006.5 9221.4 8949.7 7305.2 9475.0 9585.6 11274.4 11814.0 True False 9354.54219622555 10318.705707861554 9336.032196125945 9562.811049754417 8573.720676102987 8876.816610463582 7583.2033835588245 9286.01369200629 9182.750566821922 10562.53245989886 10360.952895116336 0.9028650444530869 0.9959224612173756 0.901078529227414 0.9229663667578176 0.8275031035170746 0.8567567771346296 0.7319021194598027 0.8962509323233464 0.8862843659052091 1.0194556974462783 1.0 13.338869073098985 -10.389844796002338 0.8539217726479007 0.9965877153918105 0.879917498160873 0.3832752173750339 0.06239552177281854 0.5540806493434244 0.7590022741296654 0.03759533381888354 0.012606032972198063 4.07525889478686e-11 10.389844796002338 -0.11667021723093751 SRS(ph)PPA ddPTM_A549_PD325901_60min_R1 1 SRSPPA 6 1 Q5BJF6-2;Q5BJF6-3;Q5BJF6-4;Q5BJF6 Q5BJF6-2 ODF2 Outer dense fiber protein 2 1 S(0.17)RS(0.83)PPA 65.313 0.047747000000000005 44670000.0 2131.1 2514.0 2112.0 2304.1 2459.0 2243.9 1850.9 2210.9 2347.6 2878.8 3272.8 True False 2347.4477031670986 2725.8636028837677 2255.3330204877216 2446.419024009231 2286.2883230894704 2225.626422362674 1921.3370123513423 2166.801865082504 2248.9385359989083 2697.03207670092 2870.2663479885487 0.8178501290697863 0.9496901236340046 0.7857573991585256 0.8523317098162876 0.7965422180041501 0.7754076286064423 0.6693932825076649 0.7549131691562265 0.7835295625351772 0.9396452279040133 1.0 11.486968903476958 -10.613092240016364 0.9197799395454015 0.9985839194462807 0.7988990149710944 0.4891389318789545 0.06661165426368312 0.3527389738858867 0.5378831636640841 0.045609802800380454 0.012771669828929364 2.437293105523248e-11 10.613092240016364 -0.19968490447518628 SRS(ph)PS(ph)SPELNNK ddPTM_A549_PD325901_60min_R1 1 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.465)RS(0.589)PS(0.933)S(0.013)PELNNK 70.134 0.00094083 43036000.0 4836.4 4509.4 5553.7 4625.0 5977.2 5220.2 4379.3 5777.9 5230.6 5697.1 5855.1 True False 5327.387767630499 4889.422963740675 5930.607479111108 4910.675745862893 5557.382092220575 5177.688421951794 4545.956657944911 5662.655251825139 5010.7760719014705 5337.384133726833 5134.9598185369605 1.0374740905272293 0.9521832957855076 1.154947202839231 0.9563221367644567 1.0822639881540437 1.0083211173845188 0.8852954684346748 1.1027652507392995 0.975816023683926 1.0394208177557944 1.0 12.326137272047959 -7.5165338483785815 24.998789102411692 0.9896794035480717 1.035180497175753 0.04621351084433101 0.07143381359280045 534.7763839798724 2107017.379985686 0.00959840787283335 0.014525914095985165 3.044150723407533e-08 7.5165338483785815 0.04550109362768129 SRS(ph)PSLNR ddPTM_A549_MK2206_60min_R1 2 SRSPSLNR 8 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.169)RS(0.762)PS(0.069)LNR;S(0.289)RS(0.711)PSLNR 80.758 0.0010732 36803000.0 2958.7 2763.1 2457.1 2548.1000000000004 3708.1000000000004 2556.25 2660.9 2586.3199999999997 3910.7 3876.2 3851.2999999999997 True False 3458.0562267300033 2903.7299878456793 2805.5537271358016 3172.3846143885567 3162.643402090366 2826.750678298578 3144.3510867525074 2952.938780272814 3024.932694104641 3000.563727862184 2894.915919527362 1.1945273447853997 1.0030446716116566 0.9691313340782105 1.0958468924743403 1.0924819545732143 0.9764534642374301 1.086163181991783 1.0200430210611868 1.0449121073604468 1.0364942579583005 1.0 11.499305731583867 SRS(ph)PSLNR ddPTM_A549_PD325901_60min_R1 2 SRSPSLNR 8 1 Q9UPX8;Q9UPX8-3;A0A2R8Y2H5;A0A087X158 Q9UPX8 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 S(0.107)RS(0.893)PSLNR;S(0.081)RS(0.834)PS(0.085)LNR 90.149 0.00073684 51695800.0 3539.8 3639.9 3374.4 4576.5 4249.0 3446.5 3389.0 4016.8 4000.8 4192.8 4565.3 True False 3899.1578901369676 3946.6471472301596 3603.4070759156066 4859.180011014385 3950.564898254237 3418.4328466834345 3517.9702495319575 3936.6817728813617 3832.6602891567704 3928.065892452278 4003.797041821108 0.9738650209810471 0.9857260760238351 0.8999974370021049 1.2136429395042987 0.9867045849200542 0.8537977352439865 0.87865848662794 0.9832370951277742 0.957256386655779 0.9810851677600562 1.0 11.967153128421542 -6.995564456501988 24.999761658479446 0.9616018510436039 1.0191103122677048 0.13434045075231604 0.0831399570996439 255.3946877489042 1439444.0839323017 0.012154853351924262 0.022905852439329057 1.0102655492425189e-07 6.995564456501988 0.057508461224100915 SRS(ph)PSSPR ddPTM_A549_MK2206_60min_R1 2 SRSPSSPR 8 1 O95382-2;O95382-3;O95382 O95382-2 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 1 S(0.025)RS(0.824)PS(0.137)S(0.014)PR;S(0.163)RS(0.834)PS(0.001)S(0.001)PR 64.04 0.007981199999999999 17224000.0 1100.9 1112.98 958.79 778.75 1095.81 779.1199999999999 854.99 947.4000000000001 1285.18 1708.24 1780.67 True False 1286.7050055791601 1169.6259280780587 1094.7608392171799 969.5437849594158 934.6178006107297 861.5659612620007 1010.3306158301807 1081.6968512908168 994.0887820107405 1322.3473975757956 1338.4804950081252 0.9613177109251406 0.8738460757853318 0.8179131808794375 0.7243615342736318 0.6982677776003423 0.64368959015482 0.754834022309789 0.8081528683645482 0.7426994907420791 0.9879467071111622 1.0 10.386380400136794 -10.74075288572327 0.8750520258227036 1.0073822603803604 0.7746723175517245 0.4951731720099313 0.08266212529115627 0.4640483613584557 0.5984329512155799 0.07200310905391598 0.016298343762879235 1.816548988134649e-11 10.74075288572327 -0.23270994282863589 SRS(ph)PSSPR ddPTM_A549_PD325901_60min_R1 1 SRSPSSPR 8 1 O95382-2;O95382-3;O95382 O95382-2 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 1 S(0.157)RS(0.841)PS(0.001)SPR 64.82 0.0025768 14256000.0 451.37 453.76 364.02 277.17 345.78 373.38 265.51 342.24 433.48 482.36 475.93 True False 497.19275011896843 491.9999476708584 388.7245862300853 294.29016140125816 321.4936056762411 370.33931707374444 275.61412834264684 335.4137547179139 415.2623430673059 451.9037072799274 417.3936271688433 1.191184334776259 1.1787433148130828 0.9313141383273664 0.7050662545985937 0.7702408104716728 0.8872663427703352 0.6603218410691161 0.8035909819539073 0.9948938269230564 1.0826799401446638 1.0 8.705264763147188 -5.764693280433483 6.133055868587503 0.9164681640901715 1.1879104630855297 0.4346085384695205 0.1300613289086983 0.12257501673412681 17.968195690566052 0.020495068720754142 0.07239984539516804 1.7191220848864342e-06 5.764693280433483 0.2714422989953582 SRS(ph)PSWYK ddPTM_A549_MK2206_60min_R1 1 SRSPSWYK 8 1 Q86Y07-4;Q86Y07-3;Q86Y07 Q86Y07-4 VRK2 Serine/threonine-protein kinase VRK2 1 S(0.194)RS(0.805)PS(0.001)WYK 73.887 0.0014299000000000002 8022000.0 1837.4 1239.4 1002.2 1040.6 2117.2 1626.6 1517.3 1379.5 2055.8 2127.5 2240.9 True False 2147.5081998829573 1302.4801660945805 1144.327029968458 1295.5470467143098 1805.76268463788 1798.7257323503068 1792.973769750679 1575.0483495415679 1590.1645824380096 1646.8962723870789 1684.4226843063032 1.2749223932277824 0.7732501932144079 0.6793585960519921 0.7691341720726445 1.072036550838514 1.0678588866731376 1.0644440890375924 0.9350671682447812 0.9440413010662392 0.9777214993191101 1.0 10.718038494345993 -6.761906391602098 24.999999219072958 0.9899679534799886 0.8530432080598861 0.14574200054754605 0.14932545614413575 17.76006480791811 950819.8681742115 0.020803594229845953 0.04109618155597873 1.730189246269512e-07 6.761906391602098 -0.13692474542010247 SRS(ph)PTPQNQDGDTMVEK ddPTM_A549_MK2206_60min_R1 2 SRSPTPQNQDGDTMVEK 17 1 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;E9PRD6;A0A0J9YXZ1 J3KNL5 GRAMD1B GRAM domain-containing protein 1B 1 S(0.14)RS(0.673)PT(0.187)PQNQDGDTMVEK;S(0.222)RS(0.77)PT(0.008)PQNQDGDTMVEK 112.64 6.903e-10 67185000.0 3690.5 3765.6000000000004 3734.5 3041.7 4938.0 3352.8999999999996 3851.7 3580.0 4992.9 5314.0 5811.5 True False 4313.36617593777 3957.2529558219753 4264.1082552556445 3786.916636547101 4211.626741329046 3707.701652525108 4551.504032787641 4087.4759632901837 3862.0161220229274 4113.563709266716 4368.344160759555 0.9874144566456903 0.9058931279658834 0.9761383486126729 0.8668997902144786 0.9641242966068728 0.8487659204673158 1.0419289014985118 0.9357037387318551 0.8840915413018674 0.9416757375067859 1.0 12.092870808378963 -7.734666923384067 24.99995632146755 0.9495966541328965 0.9254893120196154 0.07981202427484924 0.05494490347113699 718.720680383896 671135.570114007 0.009172030525082872 0.013602033205071 1.8421842995896712e-08 7.734666923384067 -0.02410734211328114 SRS(ph)PVDLR ddPTM_A549_MK2206_60min_R1 4 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.147)RS(0.853)PVDLR;S(0.452)RS(0.548)PVDLR;S(0.486)RS(0.514)PVDLR;S(0.188)RS(0.812)PVDLR 83.045 0.00095453 62263300.0 6602.67 6995.18 5995.35 5712.86 7743.01 6020.32 6166.27 7044.91 9033.11 8925.96 9624.23 True False 7717.039276217053 7351.20478317048 6845.580781402313 7112.510956460032 6604.023486103322 6657.386266435013 7286.601441508286 8043.547566632031 6987.125007912545 6909.579436651547 7234.268075764761 1.0667339384435592 1.0161642762171703 0.946271372543606 0.9831693934991678 0.9128806697428318 0.9202570594166481 1.0072340926815866 1.1118675009540226 0.9658371703586489 0.9551179696808665 1.0 12.820631344697592 -5.427656895252264 3.627176935268294 0.9826854458487201 1.0649666228664656 0.20695744826008144 0.051220728028693874 0.3177204745731419 7.039827901341318 0.007077565930738021 0.05234274682721147 3.7354515233726255e-06 5.427656895252264 0.08228117701774551 SRS(ph)PVDLR ddPTM_A549_PD325901_60min_R1 2 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.197)RS(0.803)PVDLR;S(0.197)RS(0.803)PVDLR 81.525 0.0010334 97696000.0 4818.2 4049.2000000000003 4614.3 4309.4 5058.0 4304.9 4058.3999999999996 4551.200000000001 4298.9 4625.0 4843.2 True False 5307.340117028627 4390.440294668634 4927.454146040001 4575.5818506425 4702.743529152724 4269.842321685047 4212.844632841691 4460.42274565267 4118.232182827444 4332.97671069256 4247.517103574351 1.249515890721763 1.0336486440452497 1.160078706191312 1.0772368277910118 1.1071747127740328 1.00525606314614 0.9918370026801112 1.0501247286088986 0.9695622365739008 1.0201198971150214 1.0 12.052404041416425 -5.351609555255226 0.354203247506073 0.9822109329213283 1.3296825726711492 0.6027327383872618 0.05037211695233666 2.565200178147079 0.22799055661008433 0.01373626121179277 0.3755553238905156 4.450311850599264e-06 5.351609555255226 0.34747163974982087 SRS(ph)PVEQR ddPTM_A549_MK2206_60min_R1 1 SRSPVEQR 8 1 P35612-2;P35612-8;P35612-9 P35612-2 ADD2 Beta-adducin 1 S(0.108)RS(0.892)PVEQR 58.676 0.0039347 3536100.0 239.04 470.84 411.17 199.48 369.4 429.98 319.49 253.78 351.1 375.76 552.93 True False 279.38410803310234 494.80374487975797 469.4800887169539 248.3526089549974 315.06174934122095 475.4801982023756 377.537197454455 289.7540921686545 271.57641059149 290.8755550233462 415.62222090833353 0.6722068599280239 1.190513211248366 1.1295837063064509 0.5975441072718106 0.7580483754036543 1.1440201564854346 0.9083662481504369 0.6971573645302291 0.6534212968641704 0.6998556390648312 1.0 8.699128978610844 -8.029704028838518 24.198613863152563 0.8204423517140522 0.9251593796897241 0.09045092777667674 0.20208507609225687 1270.461364939814 1034988.795545937 0.035375498273695724 0.04571263007336331 9.338905292383364e-09 8.029704028838518 0.10471702797567184 SRS(ph)PYSSR ddPTM_A549_MK2206_60min_R1 1 SRSPYSSR 8 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YCQ1 Q14004 CDK13 Cyclin-dependent kinase 13 1 S(0.335)RS(0.634)PY(0.027)S(0.004)S(0.001)R 42.68899999999999 0.021381999999999998 10292000.0 938.0 1178.5 960.01 685.5 1157.8 840.7 862.18 737.17 1391.2 1397.3 1564.6 True False 1096.3114681017817 1238.4806162195123 1096.1538535621826 853.4475307732646 987.4891537283853 929.6623159885056 1018.826945761313 841.6661049884432 1076.0954212898912 1081.648959533004 1176.0666392367539 0.9321848197422453 1.0530701024078568 0.9320508013674861 0.7256795680618376 0.8396540814806617 0.7904843866601299 0.8663003538834444 0.7156619165174767 0.9149952778086264 0.9197174066896199 1.0 10.199754094302826 -9.499358913659464 1.5009391764999493 0.977945993097413 0.8597712509982549 0.13225903036687825 0.09451017564468804 0.4036285609090335 1.8562473616977275 0.023595022118159528 0.018847954871456574 3.166949121893559e-10 9.499358913659464 -0.11817474209915813 SRS(ph)QPCDLDAR ddPTM_A549_MK2206_60min_R1 2 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.194)RS(0.806)QPCDLDAR;S(0.041)RS(0.959)QPCDLDAR 115.57 1.7239000000000002e-05 18736600.0 2267.12 2375.76 1663.3799999999999 1865.65 2471.8 1905.62 1514.26 1883.87 2629.03 3126.47 3371.75 True False 2649.7544302376464 2496.676036308586 1899.272296057607 2322.7343337522125 2108.2014943736604 2107.271443551819 1789.3814411010771 2150.914341609912 2033.5589026982193 2420.1982555722825 2534.451419434057 1.045494267485047 0.9850952427670102 0.7493820088615921 0.9164643346254706 0.8318176778643569 0.8314507144991452 0.706023176210908 0.8486705742776522 0.8023664952127246 0.9549199629609444 1.0 11.30745779516147 -5.540626742857055 22.7372186837207 0.8703697295308092 1.0303946058198132 0.3597758817998501 0.08314801871469585 70.5603972222649 90396.36251444733 0.01361409474975166 0.05276410582594208 2.8798724760478924e-06 5.540626742857055 0.16002487628900408 SRS(ph)QPCDLDAR ddPTM_A549_PD325901_60min_R1 2 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.398)RS(0.602)QPCDLDAR;S(0.038)RS(0.962)QPCDLDAR 92.52799999999999 8.1719e-05 28017200.0 1753.16 2088.76 2107.44 1678.0099999999998 1904.6599999999999 2110.16 2279.2 2303.03 1478.96 2296.52 2252.5 True False 1931.1395125918218 2264.7871357038566 2250.4635514662127 1781.6568666627886 1770.8832523202893 2092.9755565813184 2365.936203226097 2257.094259957916 1416.8044544219401 2151.5173352734446 1975.456779773958 0.9775660659165587 1.1464625087687341 1.1392117380182432 0.9018961512621172 0.8964424180026469 1.0594894193639648 1.1976653842544809 1.1425682824689207 0.7172034685487061 1.089123972390645 1.0 10.947970567177176 -8.749286036934695 24.982135895435018 0.8664571847655526 1.0575024499254628 0.08889377764298823 0.13063151781604576 211.48256147828815 434718.5337092286 0.02369531443884457 0.02676993042505636 1.7812052358348015e-09 8.749286036934695 0.19104526515991027 SRS(ph)RDDLYDQDDSR ddPTM_A549_MK2206_60min_R1 2 SRSRDDLYDQDDSR 14 2 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(0.058)RS(0.942)RDDLYDQDDSR;S(0.161)RS(0.839)RDDLYDQDDSR 128.94 3.6525000000000004e-09 24918000.0 1749.0300000000002 1552.01 1408.52 1760.48 2322.64 2173.56 1809.45 2391.3 2665.2 3071.7 2792.6000000000004 True False 2044.2235043220262 1631.0006798293123 1608.2693157565095 2191.7976790309513 1980.9827327826033 2403.5646765076417 2138.2036430998264 2730.2740980491126 2061.5364554498387 2377.8008366116983 2099.120348160911 0.9738476910640301 0.7769924584163412 0.7661634632647683 1.0441505561847548 0.943720418182878 1.1450342418973078 1.0186188919435502 1.300675352149852 0.9820954083247297 1.1327606055055137 1.0 11.035569167212888 -6.270374629535398 24.829543831735936 1.025756514323919 0.8328003290761572 0.42167264845602803 0.11216695119802837 438.5208105518374 1218575.6457783245 0.015183756785116976 0.03577340659933535 5.365687436913147e-07 6.270374629535398 -0.1929561852477617 SRS(ph)RDDLYDQDDSR ddPTM_A549_PD325901_60min_R1 2 SRSRDDLYDQDDSR 14 2 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(0.048)RS(0.952)RDDLYDQDDSR;S(0.049)RS(0.951)RDDLYDQDDSR 144.17 1.6444e-13 25386000.0 2255.3 1748.72 1873.5900000000001 2166.6 2641.1000000000004 2026.6999999999998 2206.5 2210.7 2415.7 2647.4 2595.7 True False 2484.2563957358902 1896.0907715333733 2000.7430842119254 2300.4259612943897 2455.5982473003673 2010.1952271502432 2290.4695649431305 2166.6058542394 2314.176529823039 2480.24271219189 2276.4453554980078 1.0912875153080144 0.8329173230334685 0.8788891327348518 1.0105342330043041 1.0786985250358303 0.8830412828910105 1.006160573725722 0.9517495550713192 1.0165746013774957 1.089524378962876 1.0 11.152567113534586 -7.393540413744666 0.4944211327454108 1.0072714997229442 0.9420850465402713 0.0757631006970444 0.08158112973273088 2.1820541914692915 1.0128557467434025 0.019850155861688337 0.05841486810576455 4.040727713333477e-08 7.393540413744666 -0.06518645318267291 SRS(ph)RDDLYDQDDSRDFPR ddPTM_A549_MK2206_60min_R1 1 SRSRDDLYDQDDSRDFPR 18 3 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(0.38)RS(0.62)RDDLYDQDDSRDFPR 71.527 0.00028280000000000004 17458000.0 322.62 285.56 335.15 341.51 396.16 345.98 297.27 279.92 376.62 401.3 698.19 True False 377.07036869829125 300.0937842746237 382.6793096127805 425.1799653309666 337.8853887899788 382.591373957063 351.28011107479347 319.5995172190471 291.3161713385556 310.6460512850457 524.8101539362837 0.7184890876636331 0.5718139826826933 0.7291766493893732 0.8101595636859324 0.643824030948534 0.7290090923117177 0.6693470170880913 0.6089811998146841 0.5550886718817636 0.5919208097539225 1.0 9.035651823015415 -10.885555961298616 1.1180692861401198 1.001254002272754 0.6640327496993434 0.0 0.1383717488729534 0.21469379219064122 0.47369273474898843 0.056426142361030475 0.013350988828666616 1.3014995991944916e-11 10.885555961298616 -0.3372212525734106 SRS(ph)RDDLYDQDDSRDFPR ddPTM_A549_PD325901_60min_R1 1 SRSRDDLYDQDDSRDFPR 18 3 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(0.131)RS(0.869)RDDLYDQDDSRDFPR 101.94 2.1335999999999997e-09 16764000.0 312.96 314.84 437.51 428.72 373.74 401.08 403.7 256.82 327.88 260.86 681.63 True False 344.731468811025 341.37267173107614 467.20205956135527 455.2010607062357 347.48979173300506 397.8137374576502 419.06302441311647 251.69752362860763 314.10034383341383 244.38925508135378 597.7938312085781 0.5766728440707908 0.5710541894367035 0.7815437951522493 0.7614683138933397 0.5812870150072882 0.6654697935797999 0.7010159732928055 0.4210440297112853 0.5254325612534133 0.4088186299735889 1.0 9.223504199318816 -10.811642784828518 1.0633606671844538 0.9995696762063903 0.6196818268421374 0.0 0.1993081822920521 0.26558245442837164 0.5341478874403691 0.07465004820090425 0.018653618560135178 1.5429690514809523e-11 10.811642784828518 -0.3798878493642529 SRS(ph)RENSVCSDTSESSAAEFDDRR ddPTM_A549_MK2206_60min_R1 1 SRSRENSVCSDTSESSAAEFDDRR 24 3 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.241)RS(0.584)RENS(0.173)VCS(0.003)DTSESSAAEFDDRR 90.166 8.2781e-08 16049000.0 676.84 761.66 695.66 721.04 1080.6 788.24 864.74 536.58 1104.1 1025.5 1134.3 True False 791.0740448507571 800.425240687105 794.3150485610229 897.6948323687154 921.6451714621638 871.6510336086349 1021.852064624136 612.6418582073316 854.0231128853998 793.8388377593183 852.6220049125973 0.9278133103447764 0.9387808854043791 0.9316145302189902 1.052863786292659 1.0809540055873201 1.0223182472260826 1.1984819283767918 0.7185386427718737 1.0016432932351378 0.9310560051059146 1.0 9.735762479381773 -6.231191278695597 22.17011956288883 1.004809676000399 0.9333406077990763 0.06942757583099868 0.11012787873640444 354.3450939563052 259711.11958573043 0.014164793073560764 0.03746585151008903 5.872306583520884e-07 6.231191278695597 -0.0714690682013227 SRS(ph)RENSVCSDTSESSAAEFDDRR ddPTM_A549_PD325901_60min_R1 1 SRSRENSVCSDTSESSAAEFDDRR 24 3 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.201)RS(0.76)RENS(0.037)VCS(0.001)DTSESSAAEFDDRR 158.77 4.5772e-34 21826000.0 868.13 1120.3 787.72 728.26 697.59 867.81 636.63 865.58 809.4 698.2 739.73 True False 956.2619185164714 1214.711612693192 841.1794161451642 773.2429662015371 648.5936849548535 860.7428430814883 660.857303027303 848.3153278656258 775.3837327643196 654.1155328444427 648.7478995348232 1.4740115832392635 1.8723939045724636 1.2966198684393764 1.1919005314020772 0.9997622888951467 1.3267755374601962 1.0186658076290693 1.3076193826198128 1.1952003749380908 1.008273835358031 1.0 9.34151415220771 -5.943777227011391 4.381258991750673 1.1225315989061462 1.670360661514386 0.6779184717487987 0.14235172574784247 0.07989393489223885 3.1760690259228084 0.01905296882332393 0.06260475954579402 1.1382109857129649e-06 5.943777227011391 0.5478290626082398 SRS(ph)RS(ph)PDQR ddPTM_A549_PD325901_60min_R1 1 SRSRSPDQR 9 2 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 S(0.402)RS(0.613)RS(0.985)PDQR 48.948 0.025856 47459000.0 2725.7 2646.6 1618.0 1305.9 2085.8 1424.9 1064.3 1241.8 1855.6 2383.1 2567.7 True False 3002.411057445714 2869.6382702435094 1727.807209824399 1386.5624770859147 1939.300603619365 1413.2960868240891 1104.8025189073069 1217.0313248267457 1777.6155850228206 2232.6306592976093 2251.889177991384 1.3332854417479696 1.2743248194847399 0.7672700889150993 0.6157329990469096 0.8611882958419658 0.627604635537485 0.49061140739295034 0.5404490312939381 0.7893885731128204 0.991447839049099 1.0 11.136920114612945 -2.0234178774910063 14.684377575214175 0.8517290551665799 1.1782673383997002 0.0 0.26905990847246564 0.0 0.0 0.03693567418562806 0.0 0.00947506335390111 2.0234178774910063 0.3265382832331203 SRS(ph)SDIVSSVR ddPTM_A549_MK2206_60min_R1 2 SRSSDIVSSVR 11 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.13)RS(0.85)S(0.02)DIVSSVR;SRS(0.934)S(0.066)DIVSSVR 139.48 8.3355e-09 45409000.0 6296.3 6950.2 5064.5 5322.2 6104.799999999999 4473.6 4650.5 4786.6 7249.1 8002.1 8414.599999999999 True False 7358.961510244405 7303.935493295588 5782.722254315761 6626.139238922634 5206.792006979656 4946.993382664656 5495.4356529529605 5465.115208347712 5607.190424433977 6194.420052300184 6325.0225888543955 1.1634680203691223 1.1547682859135047 0.9142611228781624 1.0476072054823724 0.8232052824846471 0.7821305478627022 0.8688404785520787 0.8640467494895647 0.8865091540249448 0.9793514513632959 1.0 12.626854916843742 -5.759729489733199 23.00889400169403 0.9207211387211417 1.1591184145334497 0.6234125544623004 0.0748896429804048 8.670304051510936 116637.52056609774 0.011554326912098904 0.040476280189426304 1.738883594982691e-06 5.759729489733199 0.23839727581230796 SRS(ph)SDIVSSVR ddPTM_A549_PD325901_60min_R1 1 SRSSDIVSSVR 11 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.018)RS(0.931)S(0.051)DIVSSVR 145.62 1.761e-11 36064000.0 9532.6 8215.8 6902.0 8565.8 10082.0 11200.0 8787.1 8413.1 9251.4 8568.4 11352.0 True False 10500.342534470783 8908.174299352604 7370.411225097653 9094.890011656733 9373.875101011816 11108.790913348166 9121.497898985626 8245.294120550727 8862.595830610118 8027.389761707711 9955.775966257037 1.0546985558995539 0.894774483630904 0.7403150944816435 0.9135289948751265 0.9415514303237187 1.1158136694717746 0.9162016029590243 0.8281920111999687 0.8901963905825103 0.8063047811556652 1.0 13.281318050536827 -10.866668172050469 1.1666643598586177 0.9991026242536014 0.9168206314599044 0.0 0.11088559545574792 1.0021154936579173 2.4638797127900216 0.06458788045102024 0.016387330607033325 1.359351678984567e-11 10.866668172050469 -0.08228199279369697 SRS(ph)SKEENR ddPTM_A549_PD325901_60min_R1 2 SRSSKEENR 9 2 Q14696 Q14696 MESDC2 LDLR chaperone MESD 1 S(0.13)RS(0.435)S(0.435)KEENR;S(0.132)RS(0.65)S(0.218)KEENR 41.684 0.020122 62452000.0 5363.7 4893.700000000001 3962.6000000000004 3872.0 4376.0 3446.6 2479.64 2876.3599999999997 3371.8999999999996 5795.4 6306.6 True False 5908.218875452753 5306.109273441645 4231.525865049545 4111.164646049974 4068.644856380452 3418.5320323165893 2574.004057111073 2818.988743339233 3230.19076909811 5429.477454950849 5530.928180831273 1.0682147159185813 0.9593524088472546 0.7650661383951594 0.7433046518843218 0.7356170109894563 0.6180756503337564 0.46538374264773263 0.5096773364566727 0.5840232712283434 0.9816575586296664 1.0 12.433305893425151 -5.649118588854981 2.2170827696099242 0.7329046870346566 1.070300485056465 0.34370715472168645 0.1624814287424793 0.40113927575378827 3.5262403535574958 0.028462951964083594 0.19319427765639427 2.2432692909454293e-06 5.649118588854981 0.3373957980218084 SRS(ph)TCGDSEVEEESPGKR ddPTM_A549_MK2206_60min_R1 1 SRSTCGDSEVEEESPGKR 18 2 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 S(0.049)RS(0.814)T(0.134)CGDS(0.003)EVEEESPGKR 76.733 0.00014256 5039300.0 1208.1 1420.5 852.04 940.74 911.74 1019.4 1184.2 994.23 1212.6 1488.7 1589.3 True False 1411.9977447907922 1492.7973825539386 972.8720840294607 1171.2213422314228 777.6242537746753 1127.2722313770453 1399.353811466917 1135.1651472016758 937.9480361242972 1152.401636052947 1194.6329475514342 1.1819511153487583 1.2495866497015955 0.814369037806547 0.9804026790253887 0.6509315312025539 0.9436138804706048 1.1713671670742771 0.9502208603306599 0.785134913654233 0.9646491321162319 1.0 10.222351701118654 -5.754874259766427 24.99992825956492 0.9060279980987538 1.2157690136403403 0.44174357362095407 0.12861055322466158 105.33636897192623 401108.70205672627 0.018606186358387556 0.06879925275532986 1.7584326550286616e-06 5.754874259766427 0.3097410155415865 SRS(ph)TCGDSEVEEESPGKR ddPTM_A549_PD325901_60min_R1 1 SRSTCGDSEVEEESPGKR 18 2 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 S(0.202)RS(0.752)T(0.043)CGDS(0.002)EVEEESPGKR 65.833 0.00070847 10968000.0 2295.6 2152.1 2432.9 2562.8 2863.3 2130.5 2249.7 2448.4 1842.8 1949.2 2791.5 True False 2528.6476220685986 2333.4650197956066 2598.011224216181 2721.0983354589016 2662.191685848753 2113.149914365025 2335.313564583077 2399.5647412673566 1765.3535245096223 1826.1271793474461 2448.16319677647 1.0328754330585899 0.9531492928527444 1.0612083490336828 1.111485679975015 1.0874241101876285 0.8631572916166039 0.9539043670201465 0.9801490131159949 0.7210930737109713 0.7459172581925636 1.0 11.257484017256582 -7.265936206320904 24.705761332206976 0.881361679435505 1.0480151080293298 0.4763293270697777 0.08966778602335185 286.1256630816142 1571986.4062522363 0.016661188040900894 0.027197107867001108 5.420805109630052e-08 7.265936206320904 0.16665342859382481 SRS(ph)TNTAVSR ddPTM_A549_PD325901_60min_R1 2 SRSTNTAVSR 10 1 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 S(0.313)RS(0.499)T(0.187)NT(0.001)AVSR;S(0.116)RS(0.868)T(0.016)NTAVSR 60.628 0.0022073 3097800.0 757.23 666.13 575.67 720.91 980.21 673.95 806.58 865.59 611.18 863.18 1230.7 True False 834.1034321567364 722.2671128834388 614.738427984927 765.4389733945989 911.363431140923 668.4615746474105 837.2748432775116 848.3251284077817 585.494230035702 808.6786674887793 1079.3317020500817 0.7727961946938472 0.6691799300544635 0.5695546853829024 0.7091786259411492 0.8443775249164646 0.6193291398536105 0.7757345046821033 0.7859725854401142 0.5424599582534403 0.7492401695908456 1.0 10.075922589118745 -10.985220390345777 1.2369258393584952 1.0012995079734233 0.6851618859925224 0.14353772835402323 0.11528463044183888 0.2625304712578947 0.709763133137999 0.0704504536190924 0.015887661914885207 1.0346169989102402e-11 10.985220390345777 -0.3161376219809009 SRS(ph)TSSLR ddPTM_A549_MK2206_60min_R1 2 SRSTSSLR 8 1 Q08499-10 Q08499-10 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 S(0.055)RS(0.536)T(0.284)S(0.084)S(0.041)LR;S(0.018)RS(0.724)T(0.194)S(0.051)S(0.013)LR 57.148999999999994 0.014369 70171000.0 5133.6 5112.4 4875.8 3782.7 4890.9 3823.0 3826.2 3370.1000000000004 5856.1 6153.9 5712.4 True False 6000.026175530177 5372.599323174063 5567.261756855127 4709.461669811854 4171.4550889360535 4227.547322497985 4521.371012864991 3847.8219954983942 4529.702700270079 4763.729715930831 4293.853425780415 1.3973523501072147 1.2512302564677285 1.2965653935528243 1.0967914371590135 0.9714945237512118 0.9845579024928224 1.052986808007594 0.8961232752836797 1.0549271833718445 1.1094299789856044 1.0 12.068057229117066 -6.335704295081282 2.560349424671738 1.0121942393473218 1.3186749708160517 0.8292333325853063 0.06048535921828907 0.07325442636420511 0.9312379535093608 0.0074830435688448774 0.020802123837232775 4.6163178607640884e-07 6.335704295081282 0.3064807314687299 SRS(ph)TSSLR ddPTM_A549_PD325901_60min_R1 1 SRSTSSLR 8 1 Q08499-10 Q08499-10 PDE4D cAMP-specific 3,5-cyclic phosphodiesterase 4D 1 S(0.001)RS(0.832)T(0.143)S(0.024)SLR 104.94 0.00168 15205000.0 1964.0 2204.6 2122.5 1950.6 2309.7 2094.8 2252.1 2657.6 3298.8 4514.3 5318.7 True False 2163.383834179616 2390.389379044374 2266.5456136293483 2071.0841318659805 2147.4746400324334 2077.7406433287274 2337.804897896407 2604.592083153131 3160.1629078860115 4229.266327584743 4664.533618017202 0.4637942421131539 0.5124605319192618 0.485910446625275 0.4440066899434967 0.4603835701253411 0.44543373753450033 0.501187276015423 0.5583821012871787 0.6774874331872288 0.9066857855303694 1.0 12.187517125522653 -9.620735067487102 0.5151565811620465 1.00307499872098 0.45519468158266274 0.9604935793669556 0.036777766226606674 0.1048249198508977 0.06089602175957985 0.023938927679566596 0.011300755034914609 2.3947761954004687e-10 9.620735067487102 -0.5478803171383172 down SRS(ph)TTELDDYSTNK ddPTM_A549_MK2206_60min_R1 1 SRSTTELDDYSTNK 14 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 S(0.003)RS(0.553)T(0.129)T(0.315)ELDDYSTNK 205.98 4.1574999999999994e-32 12218000.0 2759.2 3508.4 2716.4 2797.1 3829.6 2954.8 3545.7 3520.9 4655.2 4840.2 4869.0 True False 3224.8855040367116 3686.962574411995 3101.626366200679 3482.38962556659 3266.2709130404423 3267.4749747625015 4189.9077937158 4019.9983573040267 3600.8046328268406 3746.795458335107 3659.892922436251 0.8811420367703076 1.007396296162054 0.8474636914065904 0.9515004125444457 0.8924498563925773 0.8927788446300959 1.1448170431518359 1.0983923416612056 0.9838551862413293 1.0237445569421217 1.0 11.837585724829873 SRS(ph)TTELDDYSTNK ddPTM_A549_PD325901_60min_R1 2 SRSTTELDDYSTNK 14 1 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 SRS(0.926)T(0.073)T(0.001)ELDDYSTNK;SRS(0.827)T(0.171)T(0.002)ELDDYSTNK 259.29 2.732699999999999e-70 45001000.0 8578.599999999999 8965.0 7988.4 8791.599999999999 10801.3 8799.9 9489.0 10741.1 10687.6 11416.0 11072.099999999999 True False 9449.493156768462 9720.512012670237 8530.540862151565 9334.637164827727 10042.653950462103 8728.236531997549 9850.109087580042 10526.860334270053 10238.437339130158 10695.191811733248 9710.301891824745 0.9731410271316216 1.0010514730601823 0.8785041862945128 0.961312765433864 1.0342267482864946 0.8988635604981537 1.0143978217477463 1.0840919727874558 1.0543891892537407 1.101427322330493 1.0 13.245300434175553 -7.979271468993221 24.211276775156797 1.0316612194894659 0.9595689645273371 0.450487906762413 0.04942740837909338 139.46899885274885 162901.47533140375 0.007183041975133962 0.009924192722942038 1.0488865851901988e-08 7.979271468993221 -0.07209225496212879 SRS(ph)VEK ddPTM_A549_MK2206_60min_R1 2 SRSVEK 6 1 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.199)RS(0.801)VEK;S(0.084)RS(0.916)VEK 52.482 0.025024 15440500.0 6408.6 4705.7 3437.5 2161.5 1334.18 950.55 890.02 1232.51 1513.0 6730.8 7024.7 True False 7490.215004773011 4945.200030330216 3924.9891893001154 2691.0675970334237 1137.9238893775582 1051.1365700759768 1051.7251133945165 1407.2220669035719 1170.3079157645238 5210.307605256384 5280.27311814293 1.418527950578306 0.936542470376881 0.743330714431024 0.5096455309834184 0.21550474074298748 0.19906859864204546 0.19918005941412512 0.26650554534165677 0.22163776183155479 0.9867496412929578 1.0 12.366396838488212 -5.456071208388392 1.416822948097252 0.502919743973519 1.5887372075607262 0.5123321931146737 0.2859441360142382 0.7003674341245149 1.618119872876886 0.05166473256007135 0.9665038041764006 3.49887793541897e-06 5.456071208388392 1.0858174635872073 SRS(ph)VPSSLQASAR ddPTM_A549_MK2206_60min_R1 2 SRSVPSSLQASAR 13 1 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 1 S(0.041)RS(0.959)VPSSLQASAR;S(0.051)RS(0.949)VPSSLQASAR 102.08 3.8017e-05 19007600.0 2647.9 2711.02 2773.9 2267.75 3931.7 2701.6000000000004 2460.4 2607.0 4117.5 3808.8999999999996 4850.9 True False 3094.800785060457 2848.9993382973444 3167.2807308216998 2823.348851803165 3353.3521382914973 2987.48151882306 2907.422832066547 2976.5502336026575 3184.8928242963802 2948.466844604062 3646.2876519708366 0.8487538780402314 0.781342452989809 0.8686316147081179 0.774307767594016 0.9196619845609256 0.8193214041158577 0.7973651860667302 0.8163234823214831 0.8734617584476446 0.8086215696697436 1.0 11.83221266329151 -10.030589699646667 0.6060023198119975 1.001826555924884 0.8260928686698876 0.0 0.06840741055710334 0.30635866555216285 0.21976828790034394 0.025595580729591873 0.009145891469315302 9.319879566721928e-11 10.030589699646667 -0.17573368725499638 SRS(ph)VS(ph)PCSNVESR ddPTM_A549_MK2206_60min_R1 1 SRSVSPCSNVESR 13 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.165)RS(0.84)VS(0.981)PCS(0.011)NVES(0.003)R 60.062 0.002418 6984600.0 611.27 912.09 815.92 874.95 817.1 793.63 678.0 523.11 1054.8 1359.7 1472.1 True False 714.4374318833435 958.5114851486251 931.6297248970901 1089.3127892779976 696.905672405825 877.611399831042 801.1838238258488 597.2624444571871 815.8894841694769 1052.5428256473378 1106.5369421068813 0.6456516765929496 0.8662263758890769 0.8419327809546401 0.9844341818393443 0.6298078680309531 0.7931153190060173 0.7240461599956793 0.5397582509265173 0.7373359651382244 0.9512044158627574 1.0 10.111835901462767 -10.594394469106055 0.9969427251822411 0.9930465386141163 0.756862621577718 0.34689587340465733 0.11751692307937078 0.44651179758194826 0.8246758987758414 0.0694602810379838 0.021447851986373417 2.544518020277908e-11 10.594394469106055 -0.2361839170363983 SRS(ph)WDRR ddPTM_A549_MK2206_60min_R1 1 SRSWDRR 7 2 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06;A0A0B4J267;G3V2B6;G3V5Y2;Q86U06-4 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 S(0.015)RS(0.985)WDRR 49.06 0.05782 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SRS(ph)WDRR ddPTM_A549_PD325901_60min_R1 2 SRSWDRR 7 2 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06;A0A0B4J267;G3V2B6;G3V5Y2;Q86U06-4 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 S(0.049)RS(0.951)WDRR;S(0.016)RS(0.984)WDRR 72.928 0.0081691 14880000.0 2261.3 1565.4 1281.2 1946.9 1871.2 2022.4 1786.2 1342.2 2519.5 2192.0 2858.3 True False 2490.865511318923 1697.3217517717778 1368.1499364814715 2067.155591269291 1739.7733672895554 2005.930244924583 1854.1748184461453 1315.4287680644693 2413.6141767972626 2053.5967459109406 2506.7472202565596 0.9936644154586871 0.6771012801195252 0.5457869566686683 0.8246366345058608 0.69403622081667 0.8002124142055619 0.7396736310158848 0.5247552515206693 0.9628470542595177 0.819227694486387 1.0 11.291600807172589 -8.88305441585626 9.21083782901024 0.9836067903537525 0.7228536642314416 0.2959419895064306 0.13171048653423423 0.15942794055671985 12.234731651882234 0.02006851567708627 0.021336534175919897 1.3090178965256808e-09 8.88305441585626 -0.26075312612231094 SRS(ph)WEDSPER ddPTM_A549_PD325901_60min_R1 1 SRSWEDSPER 10 1 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IU26;B1AN86 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.152)RS(0.848)WEDSPER 125.73 3.3225e-06 13145000.0 1483.0 1473.3 1505.9 1694.9 1755.7 1467.9 1359.4 1141.6 1968.3 1255.4 2136.0 True False 1633.5530682731016 1597.4601615467993 1608.0994297123384 1799.5901236028153 1632.3856888361875 1455.9459090806934 1411.1327108922226 1118.829892432125 1885.5791959476285 1176.133829752096 1873.2855412196116 0.8720256641758785 0.8527584964472449 0.8584379659842875 0.9606598054620031 0.8714024919945813 0.7772151532930707 0.7532929069497317 0.5972553931653716 1.0065626165672603 0.6278454639576028 1.0 10.87135510816383 -8.895631899319703 23.244506393075262 1.0031348835587321 0.822078594318661 0.0 0.14287758905492326 4.151786321041394 912.8345994080595 0.01585443287323076 0.016878261133578168 1.2716514789145815e-09 8.895631899319703 -0.1810562892400711 SRS(ph)WPASPR ddPTM_A549_MK2206_60min_R1 2 SRSWPASPR 9 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(0.04)RS(0.958)WPAS(0.002)PR;S(0.06)RS(0.94)WPASPR 97.779 0.00023791 150655000.0 2709.8 2527.66 1571.74 1878.2200000000003 3810.5 2945.4 2826.7 2346.12 4179.4 3791.9 4287.7 True False 3167.1479917507577 2656.307097491227 1794.6363660772543 2338.3839843164988 3249.9804977388285 3257.080273001717 3340.2748006025467 2678.6896946911643 3232.77257313037 2935.307156411075 3222.945755500084 0.9826873400974543 0.8241861014750664 0.556831080080897 0.7255424576494824 1.0083882088901461 1.0105910927738642 1.0364042878792596 0.8311308653333289 1.0030490173821622 0.9107528885343037 1.0 11.65416419166656 -6.764275679843989 24.999362049900892 0.9921644702246605 0.7606255607800706 0.425733053238308 0.10930102855589145 45.03370558183094 396935.8220460967 0.015228265368321954 0.029713139205669627 1.7207759204565448e-07 6.764275679843989 -0.23153890944458988 SRS(ph)WPASPR ddPTM_A549_PD325901_60min_R1 4 SRSWPASPR 9 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(0.039)RS(0.961)WPASPR;S(0.045)RS(0.955)WPASPR;S(0.02)RS(0.98)WPASPR;S(0.033)RS(0.967)WPASPR 103.46 0.00018124 196282000.0 9172.1 7661.5 6977.300000000001 6959.1 6992.5 7831.699999999999 6039.09 5831.099999999999 9375.6 8437.300000000001 10878.5 True False 10103.244839856852 8307.161493036587 7450.821535913343 7388.947801737179 6501.370922815422 7767.921231791863 6268.910874666851 5714.79413609054 8981.57613652725 7904.56743808137 9540.513464493231 1.0589833427160842 0.8707247805847358 0.780966513347834 0.774481146034383 0.6814487445577709 0.8142036862797379 0.6570831746108583 0.5990027850554578 0.9414143347686507 0.8285264171052916 1.0 13.219851197931002 -8.956313145290522 16.07369452724177 0.9741596097719013 0.7759294285239828 0.18656439258751345 0.12315138595070521 2.9043982988478394 1068.299868368953 0.02056183531108395 0.021832119352745587 1.105826147494347e-09 8.956313145290522 -0.19823018124791847 SRS(ph)YDR ddPTM_A549_PD325901_60min_R1 2 SRSYDR 6 1 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 S(0.135)RS(0.864)Y(0.001)DR;S(0.011)RS(0.989)YDR 63.227 0.045384 57328000.0 2550.39 2805.06 2344.1 1918.51 2612.4300000000003 2231.6800000000003 2485.44 2452.69 2513.0600000000004 3015.0099999999998 3119.69 True False 2809.303715302116 3041.4522505589252 2503.184722218401 2037.012005447658 2428.9419291942377 2213.5059379911468 2580.0247792849536 2403.7691738519184 2407.4448276015596 2824.6417540551734 2735.987907344292 1.0267968318723266 1.1116468177343424 0.9149107404674667 0.7445252224908039 0.8877750967663848 0.8090335238870641 0.9429956807774325 0.8785744876281838 0.8799179342639583 1.0324028649662176 1.0 11.417846138404547 -5.772348569589924 24.181330451179967 0.9105811662353168 1.0692218077701492 0.40520274163604564 0.07855325149177876 99.56734913304777 220704.19376784546 0.011297264042571331 0.03565618943731074 1.6890847092496676e-06 5.772348569589924 0.15864064153483237 SRS(ph)YER ddPTM_A549_MK2206_60min_R1 2 SRSYER 6 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4;Q96S94;Q96S94-3;A0A0A0MSF3 O75494-2;Q5JRI1;Q96S94 SRSF10;CCNL2 Serine/arginine-rich splicing factor 10;Cyclin-L2 1 S(0.008)RS(0.992)YER;S(0.01)RS(0.99)YER 65.404 0.047648 37677000.0 4274.5 4830.4 3455.2 3258.3999999999996 4106.1 3393.5 3067.8 3593.6000000000004 3553.1 6161.0 6913.6 True False 4995.931098508604 5076.246727693453 3945.19931545302 4056.7081462751357 3502.098129317779 3752.597917577011 3625.179549753595 4103.003804938441 2748.328523134785 4769.225820999666 5196.762314346942 0.9613545504507885 0.9768094864910839 0.7591648562723998 0.7806222222393343 0.6739000010928679 0.7221030500504209 0.697584251591687 0.789530780272765 0.5288539973335604 0.917730219801095 1.0 12.343397360263117 -5.763054437435792 23.810576441731023 0.7575304457106496 0.9690821287560599 0.31471879692471183 0.11688005634608321 25.990299095220056 383236.08566800377 0.022458929443118624 0.07571748886344237 1.7256215772419993e-06 5.763054437435792 0.21155168304541028 SRS(ph)YER ddPTM_A549_PD325901_60min_R1 2 SRSYER 6 1 O75494-2;O75494;O75494-6;O75494-3;Q5JRI1;O75494-4;Q96S94;Q96S94-3;A0A0A0MSF3 O75494-2;Q5JRI1;Q96S94 SRSF10;CCNL2 Serine/arginine-rich splicing factor 10;Cyclin-L2 1 S(0.017)RS(0.983)YER;S(0.025)RS(0.974)Y(0.001)ER 70.056 0.042617 55279000.0 5425.9 4555.6 4721.3 5420.9 5687.8 4796.3 3938.1 4751.2 4430.799999999999 5729.0 5941.200000000001 True False 5976.733373663532 4939.516399879591 5041.715809483275 5755.736681242847 5288.3085498447745 4757.240523008195 4087.9665505110065 4656.433588755706 4244.588884522049 5367.269962282743 5210.470064369829 1.1470622227605827 0.9479982302665799 0.9676124701223163 1.1046482582448085 1.014938860508425 0.9130156136082803 0.784567706945538 0.8936686193818235 0.8146268632358803 1.0300932345788034 1.0 12.34719781627223 -7.255112503554619 4.593590802305058 0.897891972244803 1.032646144884972 0.3740439164482291 0.08395316186058176 0.17944827981927838 10.358857000731364 0.013369425019302016 0.022713478976502378 5.557602694748932e-08 7.255112503554619 0.13475417264016898 SRSES(ph)DLSQPES(ph)DEEGYALSGR ddPTM_A549_PD325901_60min_R1 1 SRSESDLSQPESDEEGYALSGR 22 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 2 S(0.255)RS(0.325)ES(0.415)DLS(0.006)QPES(0.999)DEEGYALSGR 100.41 2.615e-10 11694000.0 367.99 328.63 218.81 288.36 322.61 336.62 218.16 276.43 264.36 275.21 524.94 True False 405.34807390008024 356.32480342708544 233.65976241141956 306.17134228692413 299.9509865440807 333.8786783260052 226.46219818173265 270.9163867948601 253.24986853666385 257.8331936323674 460.3757078688305 0.8804723337304569 0.7739869791926748 0.5075414675832408 0.6650466935022514 0.6515352166008339 0.7252308769105023 0.49190735807949254 0.5884680320101711 0.5500938998475988 0.5600495187418291 1.0 8.846667900174115 -10.817357666004073 1.0430360528414446 1.001741363130061 0.6392602938941372 0.0 0.1687848233560488 0.30365959732498476 0.5818935522746403 0.08109827399186827 0.01972008098383077 1.522798127082717e-11 10.817357666004073 -0.3624810692359237 SRSES(ph)DLSQPESDEEGYALSGR ddPTM_A549_MK2206_60min_R1 1 SRSESDLSQPESDEEGYALSGR 22 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 S(0.275)RS(0.275)ES(0.385)DLS(0.066)QPESDEEGYALSGR 90.166 5.104100000000001e-07 18255000.0 430.63 724.27 495.63 344.07 675.22 479.55 489.66 451.52 643.15 540.88 759.68 True False 503.3098161073247 761.1322493927079 565.9177867324555 428.36716544588916 575.8960324585255 530.2956627004733 578.6248837382963 515.5243427220067 497.47755189950647 418.69483234252556 571.030489898618 0.8814062033652238 1.332909998427301 0.9910465320913595 0.7501651365795587 1.0085206353180394 0.9286643569498768 1.01329945418681 0.9027965263527943 0.8711926257875121 0.7332267536482361 1.0 9.157423969427928 -5.9861561363288756 24.992349789433195 0.9325223760520897 1.1208631957715618 0.2391264854972297 0.13375355758834803 204.72792325223645 369590.58333708975 0.014932397806565238 0.04639622883363395 1.0323901770252853e-06 5.9861561363288756 0.18834081971947214 SRSES(ph)DSEKVQPLPISTIIR ddPTM_A549_PD325901_60min_R1 1 SRSESDSEKVQPLPISTIIR 20 2 Q9HCI7-2;Q9HCI7 Q9HCI7-2 MSL2 E3 ubiquitin-protein ligase MSL2 1 S(0.269)RS(0.269)ES(0.361)DS(0.101)EKVQPLPISTIIR 90.46799999999999 7.9596e-07 3790100.0 845.07 870.51 953.5 947.53 954.2 896.58 1089.6 808.08 1248.0 1024.8 1038.9 True False 930.8608842923472 943.8709327551106 1018.2102438612878 1006.0567761032365 887.1802838112945 889.2785497401512 1131.0653242519977 791.9622104735039 1195.5509000369057 960.0939531065383 911.1218861297068 1.0216644978713971 1.0359436504862334 1.1175346123957952 1.1041955982166087 0.9737229423605307 0.9760258899252849 1.2413984796881279 0.8692165368100494 1.3121744941452407 1.053749193957854 1.0 9.831500254507297 -8.76675627657092 24.999906086404646 1.1474157101645723 1.048930931628599 0.07282326217467827 0.11545779423543365 233.140442229145 1096218.8009128352 0.023345106732955964 0.025215561749441458 1.710975234638533e-09 8.76675627657092 -0.09848477853597326 SRSES(ph)ETSTMAAK ddPTM_A549_MK2206_60min_R1 3 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.282)RS(0.282)ES(0.404)ET(0.032)STMAAK;S(0.201)RS(0.201)ES(0.297)ET(0.297)S(0.003)TMAAK;S(0.305)RS(0.206)ES(0.458)ET(0.03)STMAAK 90.75399999999999 5.1274e-05 175558700.0 3730.8 3734.27 3966.9 3601.7999999999997 4616.2 3291.25 3356.6 3719.5 5019.9 5293.7 6215.700000000001 True False 4360.467830697365 3924.3283926432227 4529.466069828253 4484.241161690947 3937.163095043164 3639.5278904450674 3966.450771465845 4246.75051549102 3882.900665133069 4097.8494933656775 4672.170145407065 0.9332853245903048 0.8399369608790892 0.9694565756088537 0.959776939223658 0.8426840146036969 0.7789801692095637 0.8489525526729861 0.9089460322128359 0.8310700475987844 0.8770762548949617 1.0 12.189877098149147 -10.913247084104984 1.131332252932589 1.0009453911087218 0.8751499021870519 0.0 0.06640779916760131 0.4342448975377653 0.974920723502359 0.043325993751821675 0.009957821084690352 1.2211047367254331e-11 10.913247084104984 -0.12579548892166992 SRSES(ph)ETSTMAAK ddPTM_A549_PD325901_60min_R1 2 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.07)RS(0.056)ES(0.833)ET(0.014)S(0.014)T(0.014)MAAK;S(0.017)RS(0.052)ES(0.802)ET(0.034)S(0.042)T(0.053)MAAK 46.964 0.020418000000000002 7621200.0 1393.4 1076.6 1351.5 994.16 1409.1 1386.7 1103.1 1133.3 1323.2 1511.6 1756.3 True False 1534.856942233136 1167.328860328029 1443.220917229712 1055.5670052988232 1310.1296771310995 1375.4071749589195 1145.0790741394815 1110.6954424433486 1267.5905055519493 1416.15731802873 1540.2862341029972 0.9964751409513031 0.757864891915908 0.9369822863282212 0.6853057450802607 0.8505754632638576 0.8929555718323375 0.7434196636875944 0.7210967791906382 0.822957757776849 0.9194117863771242 1.0 10.588982759055689 -10.459723642034268 0.8938531358023714 0.9953083043168399 0.8196457237703114 0.2290746958687906 0.09264037401091554 0.46143731491889217 0.6881300544642773 0.04900965077184214 0.015908798685526564 3.46957562409853e-11 10.459723642034268 -0.1756625805465285 SRSESDLSQPES(ph)DEEGYALSGR ddPTM_A549_MK2206_60min_R1 2 SRSESDLSQPESDEEGYALSGR 22 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 S(0.002)RS(0.002)ES(0.002)DLS(0.064)QPES(0.93)DEEGYALSGR;SRSESDLS(0.001)QPES(0.999)DEEGYALSGR 99.219 5.1488e-08 16534500.0 1261.73 1504.92 1066.94 1113.52 1759.73 1371.28 1301.1599999999999 1355.42 1839.4299999999998 1813.38 2269.41 True False 1474.6791776631783 1581.5139999669655 1218.248135456542 1386.3324499878124 1500.8760481002344 1516.3879394180058 1537.5639295121546 1547.55493579966 1422.802041966118 1403.7361985528933 1705.852864470332 0.8644820478822872 0.927110440124639 0.7141578038940707 0.8126916915652448 0.879839099467853 0.8889324343274148 0.9013461603498663 0.9072030583834535 0.8340707874637819 0.8228940653617004 1.0 10.736277499399591 -13.94859964837124 0.2857821655851447 1.5806034492623313 0.8450563393607148 0.0 0.07753648794267116 16.534706605671744 0.37402423301109017 5.4524604612326035 0.02353248402887293 1.1256421619577066e-14 13.94859964837124 -0.7355471099016165 SRSESDLSQPES(ph)DEEGYALSGR ddPTM_A549_PD325901_60min_R1 2 SRSESDLSQPESDEEGYALSGR 22 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 SRSESDLSQPES(1)DEEGYALSGR;SRSESDLS(0.001)QPES(0.999)DEEGYALSGR 143.08 2.3631999999999996e-27 24543000.0 2915.3999999999996 2632.0 3060.7 2788.5 3547.6000000000004 2753.4 3093.41 3337.3999999999996 2761.3999999999996 2971.8 2922.1000000000004 True False 3211.369261795956 2853.8078770048032 3268.417507484263 2960.739311857012 3298.4288145555956 2730.9772232868595 3211.1314103289037 3270.8329388603474 2645.3479610271716 2784.1600408294403 2562.7002247180835 1.253119358566112 1.1135941104148237 1.2753803491954716 1.1553201905161248 1.2870911637425122 1.0656639418632305 1.2530265457334764 1.2763228829154858 1.0322502552237376 1.0864165905849246 1.0 11.32344901198185 -8.828590581273671 7.224037231976467 1.0145569045940759 1.2061351334937607 0.5180817928789356 0.07208224401707039 0.0972703992213069 8.733635083995134 0.01097704000974883 0.011673833446685504 1.483916345735358e-09 8.828590581273671 0.1915782288996848 SRSESET(ph)STMAAK ddPTM_A549_PD325901_60min_R1 1 SRSESETSTMAAK 13 1 A0A087WVF1;Q96B23-2;Q96B23 A0A087WVF1 C18orf25 Uncharacterized protein C18orf25 1 S(0.005)RS(0.005)ES(0.043)ET(0.744)S(0.192)T(0.012)MAAK 71.354 0.0006496000000000001 25663000.0 2129.0 1772.0 2212.3 2351.2 2496.5 2190.8 2380.9 2400.9 2194.8 2721.8 2892.8 True False 2345.134512713038 1921.3326588345403 2362.439981640616 2496.4282840373708 2321.1544524574488 2172.958851157424 2471.506452378471 2353.0121660303857 2102.5601886225954 2549.9450834947065 2537.0039389700805 0.9243716482620309 0.7573234827591645 0.9311928709892622 0.9840064675070305 0.9149195303968437 0.8565059035893953 0.9741831356327342 0.9274767492026883 0.8287571636471911 1.0051009556295287 1.0 11.3089100440041 -11.068004731727976 1.3881719985429595 0.9998833341454881 0.8923351405121661 0.27819144947688446 0.0625882797238477 0.4669178690252164 1.6086363424532348 0.04640751613834882 0.010310015689865493 8.550573968071949e-12 11.068004731727976 -0.10754819363332202 SRSGS(ph)ESEEAELSLSLAR ddPTM_A549_PD325901_60min_R1 1 SRSGSESEEAELSLSLAR 18 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 S(0.131)RS(0.131)GS(0.735)ES(0.003)EEAELSLSLAR 123.14 5.1959e-11 4909800.0 599.31 816.41 719.56 851.56 635.45 773.41 745.45 751.74 857.54 776.73 730.09 True False 660.1515100112964 885.2117358911437 768.3936686657875 904.1589271669206 590.818184183491 767.1116053832685 773.8185076758917 736.7459559713783 821.5005759756797 727.6871352424293 640.293558421828 1.0310138237817252 1.382509201049876 1.2000646555928125 1.412100614279891 0.9227301702670848 1.198062350141421 1.2085370803716518 1.1506377758778061 1.2830061542403832 1.136489857927051 1.0 9.322589685792071 -10.924555801902818 1.1224477742825032 0.9973929933148353 1.2080842859623184 0.08710388248193357 0.13824895276626284 0.5571713658912579 1.221421064542569 0.0933448471832939 0.020918738977089804 1.1897184540451372e-11 10.924555801902818 0.2106912926474831 SRSPAPPADKEAEKPVFFPAFAAEAQK ddPTM_A549_MK2206_60min_R1 2 SRSPAPPADKEAEKPVFFPAFAAEAQK 27 3 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8 C9J0Q5 NCOR2 0 ; 121.25 3.6896e-18 13125000.0 2535.2 2610.3 2254.1 2021.69 3335.3 2334.0 2260.7 2543.1 3426.4 3156.6 3736.5 False True 2963.079780310915 2743.1531205072474 2573.7652746476756 2517.0041407571134 2844.6817882451946 2580.982330816191 2671.439927025217 2903.592212917116 2650.32587083646 2443.5218676460872 2808.623927846179 1.0549934261163907 0.9766893649627423 0.9163794586843789 0.896169870163893 1.0128382657576613 0.9189490644250983 0.9511561517863437 1.0338131011878704 0.9436385713871236 0.870006782830454 1.0 11.455647746522738 SRSPAPPADKEAEKPVFFPAFAAEAQK ddPTM_A549_PD325901_60min_R1 2 SRSPAPPADKEAEKPVFFPAFAAEAQK 27 3 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8 C9J0Q5 NCOR2 0 ; 123.14 2.4974e-18 9197600.0 2827.3 2671.3 2912.0 2715.7 3049.6 3176.6 2817.7 3287.1000000000004 3128.7 2823.0 3596.3999999999996 False True 3114.325414651745 2896.4198259281666 3109.6258312785235 2883.4426211978093 2835.4066165488616 3150.730822798372 2924.929115404603 3221.5362118199346 2997.2116193473275 2644.755298223805 3154.065599457961 0.9874003302870284 0.9183131214601016 0.9859103221609992 0.9141986842928507 0.898968815688595 0.9989427053577573 0.9273520233400548 1.021391632556269 0.9502692714642367 0.8385226035496272 1.0 11.622996950823643 -7.729482655923437 1.6454483938665732 0.9782956360886279 0.9432726799693663 0.0 0.05552756558668153 0.5127571911573438 2.8343473101506 0.005895377514431592 0.009294045454068464 1.8643066301109103e-08 7.729482655923437 -0.03502295611926165 SRSPGS(ph)PVGEGTGSPPK ddPTM_A549_MK2206_60min_R1 1 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.262)RS(0.274)PGS(0.463)PVGEGT(0.001)GSPPK 68.192 0.0004991 25416000.0 2371.4 3521.7 3044.0 2866.7 4274.3 2719.4 2507.2 2486.7 4588.3 5245.4 5069.9 True False 2771.6343448364237 3700.9394876031033 3475.68497228496 3569.041628691051 3645.556132130972 3007.1651030083744 2962.725786277535 2839.1973401993573 3549.057376009493 4060.460496911485 3810.9039078783185 0.7272905357457576 0.971144793221397 0.912036896312091 0.9365341438582948 0.9566119273158472 0.7890949695140916 0.7774338734053785 0.745019399289984 0.9312901772916636 1.0654848810323596 1.0 11.895917515647328 -9.054651280418234 3.746596908944268 0.9725014128944802 0.8587249852162222 0.3523237475395883 0.08700849291155162 0.2130054322570138 6.275573143230555 0.016027512330853592 0.015967122631972475 8.817566010361496e-10 9.054651280418234 -0.11377642767825802 SRSPGS(ph)PVGEGTGSPPK ddPTM_A549_PD325901_60min_R1 2 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.057)RS(0.057)PGS(0.884)PVGEGT(0.001)GSPPK;S(0.023)RS(0.023)PGS(0.955)PVGEGTGSPPK 99.071 2.0219e-07 66312000.0 9005.0 9487.2 9100.7 10072.5 10412.400000000001 10874.7 9731.0 9723.900000000001 9713.0 10687.400000000001 11301.6 True False 9919.180970869375 10286.719639331293 9718.328228954828 10694.655448692758 9681.068944829933 10786.1400486953 10101.318530007515 9529.949186248019 9304.79638786736 10012.595740076913 9911.574846745112 1.00076739814226 1.0378491610452174 0.9805029351260214 1.0790066779554013 0.9767437662047342 1.0882367550538539 1.019143646312141 0.9614969703202699 0.9387808225978322 1.0101922141429396 1.0 13.274898589609597 -8.209785858221183 5.90815452759144 0.9695686747515939 1.0275721580564752 0.2685607362880761 0.03763507182086681 0.18048769105728055 14.810605832847902 0.005876553363300496 0.0075741613814621295 6.168991072880399e-09 8.209785858221183 0.058003483304881254 SRSRENS(ph)VCSDTSESSAAEFDDR ddPTM_A549_PD325901_60min_R1 1 SRSRENSVCSDTSESSAAEFDDR 23 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.229)RS(0.229)RENS(0.269)VCS(0.269)DT(0.002)S(0.002)ESSAAEFDDR 50.498999999999995 0.0031451 3171800.0 493.39 510.6 451.96 372.71 792.43 467.47 383.23 260.77 734.87 449.55 569.25 True False 543.4785895854793 553.6300539508555 482.6327234562642 395.73145021417514 736.7724505350913 463.66307930918447 397.8140273615026 255.56873777989261 703.9859694792635 421.1653362793169 499.23585877306334 1.0886208993904167 1.1089549042239732 0.9667429031287867 0.7926743306995943 1.4758003408365032 0.9287455441375875 0.796845860269697 0.5119198336593566 1.410127011327672 0.8436199621445165 1.0 8.963577752612897 SRSRENS(ph)VCSDTSESSAAEFDDRR ddPTM_A549_PD325901_60min_R1 1 SRSRENSVCSDTSESSAAEFDDRR 24 3 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.012)RS(0.144)RENS(0.657)VCS(0.184)DT(0.003)SESSAAEFDDRR 163.14 2.2701e-34 22682000.0 948.82 1217.4 1096.2 915.57 975.27 1299.5 803.56 1070.3 1303.8 1082.9 1122.7 True False 1045.1435079156333 1319.9945704656723 1170.5947239860984 972.1226794896628 906.770399698848 1288.9173028478513 834.1399155249043 1048.9520268658935 1249.0058200866326 1014.5255091911298 984.6150173816742 1.061474271126718 1.3406199856425633 1.1888857099691497 0.9873124645963338 0.9209390306783726 1.3090571239461586 0.8471736676768153 1.0653422996282411 1.2685220091483436 1.0303778545740596 1.0 9.943415933549057 -6.021985627075149 23.72239041710386 1.0955444787943691 1.2169735475578214 0.11527217244343546 0.1455879120418966 678.942218192743 732579.4519007637 0.021445873476677896 0.057377385106127096 9.506362543308266e-07 6.021985627075149 0.12142906876345227 SRSRENSVCS(ph)DTSESSAAEFDDR ddPTM_A549_PD325901_60min_R1 1 SRSRENSVCSDTSESSAAEFDDR 23 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.221)RS(0.221)RENS(0.221)VCS(0.252)DT(0.036)S(0.036)ES(0.006)S(0.006)AAEFDDR 42.325 0.013878999999999999 2316000.0 408.67 374.86 433.01 397.32 554.45 325.97 269.42 431.77 614.88 436.68 444.59 True False 450.1578775530468 406.4507677712847 462.3966625006572 421.86155402080976 515.5073447486609 323.315408395009 279.67292553228083 423.15800863298733 589.0387319027981 409.10795027572505 389.9082484882147 1.1545225813981546 1.0424266974274332 1.1859114658217689 1.081950832424005 1.3221247479309033 0.8292089476142013 0.7172788126864522 1.0852758572656296 1.5107111331618885 1.0492415891737428 1.0 8.606990864969799 -8.546823494261382 24.962787182599868 1.244159918374083 1.0451588491144617 0.06612803467749295 0.19832008058556133 351.75262700377607 366705.9540059776 0.04036795484358056 0.04577392197513552 2.8390726484356123e-09 8.546823494261382 -0.19900106925962135 SRSS(ph)S(ph)SPPPK ddPTM_A549_PD325901_60min_R1 1 SRSSSSPPPK 10 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.307)RS(0.385)S(0.421)S(0.472)S(0.416)PPPK 45.915 0.011907 7596600.0 1679.5 1563.6 1875.2 1733.9 1889.7 1478.9 968.78 1360.1 1625.8 1997.8 2160.3 True False 1850.001603617446 1695.3700594546776 2002.4623484936417 1840.9990650273896 1756.9739911110923 1466.856328727732 1005.6474530367567 1332.9717385221916 1557.473279871795 1871.6585670533186 1894.5967952700034 0.9764619090648246 0.8948447836960827 1.0569332501210456 0.9717102180387804 0.9273603731925989 0.7742313997309844 0.5307976111579137 0.7035648650151056 0.822060548059692 0.9878928180001403 1.0 10.887675133924747 -7.024984046281013 6.186268215882992 0.8550644530524346 0.9725185444748116 0.2344951298746618 0.13058450463091448 0.32091653669072007 43.41637931460165 0.022982967409973465 0.041210633452362186 9.440955568061573e-08 7.024984046281013 0.11745409142237695 SRSS(ph)S(ph)SPPPKQK ddPTM_A549_MK2206_60min_R1 1 SRSSSSPPPKQK 12 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.294)RS(0.361)S(0.397)S(0.5)S(0.448)PPPKQK 40.025 0.035012 3978400.0 905.74 990.65 771.79 799.5 1008.0 828.62 974.89 889.86 1375.1 1567.0 1627.4 True False 1058.6067687830575 1041.069853591735 881.2414273192545 995.3775358909191 859.7245352895253 916.3040184065597 1152.0148938194418 1016.0003800819565 1063.6420455834743 1213.013611671235 1223.2716660449278 0.8653897561493732 0.8510536804614414 0.7203971544346133 0.813701129127895 0.7028075276763173 0.7490601179124393 0.941749020922006 0.8305598897478602 0.8695059937278147 0.9916142467299524 1.0 10.256529120033704 -9.656337075165663 0.4332128537353363 1.00921459866374 0.7880450631652895 0.5786812078954291 0.06247955251748283 0.5909780478372043 0.2417240496166735 0.05313210963005211 0.02252318819151522 2.2062916677165887e-10 9.656337075165663 -0.22116953549845042 SRSS(ph)SS(ph)PPPK ddPTM_A549_PD325901_60min_R1 1 SRSSSSPPPK 10 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.276)RS(0.355)S(0.399)S(0.214)S(0.756)PPPK 51.211000000000006 0.012762 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SRT(ph)AS(ph)GSSVTSLDGTR ddPTM_A549_MK2206_60min_R1 2 SRTASGSSVTSLDGTR 16 1 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 2 S(0.429)RT(0.572)AS(0.985)GS(0.011)S(0.002)VTSLDGTR;S(0.421)RT(0.579)AS(0.983)GS(0.013)S(0.002)VTSLDGTR 75.064 0.00027639 19596000.0 346.91 584.03 633.01 552.54 541.23 780.09 723.32 637.85 631.67 1035.8 875.0 True False 405.45992686480747 613.754632406179 722.7803365000336 687.9123248044627 461.6157839630459 862.6386060181667 854.7378811942668 728.2671908336996 488.59775356971346 801.812060605657 657.7133512285311 0.6164690531330345 0.9331643203832758 1.0989290929703115 1.0459150989097659 0.7018494958340163 1.311572289671267 1.299559876042834 1.1072714115858866 0.7428734001781633 1.2190904428319214 1.0 9.361315146280436 -4.38558016092839 16.507548287567072 0.9443260985911116 0.9402696449843608 0.0 0.2349898132579259 0.0 0.0 0.03042451620987942 0.0 4.115473779638455e-05 4.38558016092839 -0.004056453606750776 SRT(ph)AS(ph)GSSVTSLDGTR ddPTM_A549_PD325901_60min_R1 3 SRTASGSSVTSLDGTR 16 1 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 2 S(0.153)RT(0.844)AS(0.745)GS(0.099)S(0.115)VT(0.022)S(0.02)LDGT(0.002)R;S(0.431)RT(0.569)AS(0.962)GS(0.029)S(0.007)VT(0.001)SLDGTR;S(0.44)RT(0.56)AS(0.982)GS(0.015)S(0.002)VTSLDGTR 71.527 0.00058629 62299000.0 2638.17 2062.8500000000004 2008.28 2403.59 2832.74 2492.0600000000004 2447.9 2326.62 2492.95 2331.9500000000003 2892.83 True False 2905.9950762818935 2236.6936090727054 2144.573957568693 2552.0542953510476 2633.7781148224753 2471.7654895998594 2541.0561740422777 2280.2137389019185 2388.1799809671506 2184.7102790269228 2537.0302491602656 1.1454317808168633 0.8816188178335796 0.845308785056279 1.0059219026638546 1.0381342972533467 0.9742751354336401 1.001586865148078 0.898772783515943 0.9413289343939107 0.8611289832866764 1.0 11.308925005503964 -11.05651508496699 1.4221976423301483 0.9996348314970034 0.9629899417377298 0.0 0.08852648643148313 1.5224214479701017 5.581056953903501 0.051590241971443275 0.011978176813688433 8.779805904202046e-12 11.05651508496699 -0.0366448897592736 SRT(ph)ASGSSVTSLDGTR ddPTM_A549_MK2206_60min_R1 1 SRTASGSSVTSLDGTR 16 1 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 1 S(0.321)RT(0.669)AS(0.009)GS(0.001)S(0.001)VTSLDGTR 59.032 0.0023296 13950000.0 2489.4 2953.2 3423.5 3064.3 4208.5 2937.6 2502.5 2828.1 4102.8 4577.1 5086.9 True False 2909.5498600134097 3103.505265862929 3909.003778783692 3815.0536375616557 3589.4352249662375 3248.4548821789367 2957.17185711532 3228.9918356930093 3173.5223508253066 3543.129931065992 3823.6823387021877 0.7609287598406913 0.8116535294917576 1.0223139457004327 0.9977433530361048 0.938737820512711 0.8495619129494707 0.7733832455650661 0.8444717813009998 0.8299649577852865 0.9266276895450946 1.0 11.900746957715269 -10.872941156521438 1.139335752594519 0.9994900939901294 0.8711583451371302 0.1399469689640711 0.08319911883640743 0.6028912271059126 1.398220802220485 0.06032353190574834 0.014815720706067846 1.3398582153533387e-11 10.872941156521438 -0.12833174885299925 SRT(ph)ASGSSVTSLDGTR ddPTM_A549_PD325901_60min_R1 1 SRTASGSSVTSLDGTR 16 1 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 1 S(0.449)RT(0.542)AS(0.007)GS(0.002)S(0.001)VTSLDGTR 61.16 0.0015841 22928000.0 4391.3 3627.6 3361.1 4599.6 5209.7 6532.1 4144.6 5156.0 6314.5 4197.4 4989.5 True False 4837.101543295802 3933.3105830633094 3589.204457936209 4883.7068455504805 4843.788644489311 6478.904743310853 4302.325021012146 5053.1595351962505 6049.123524265253 3932.3754476672348 4375.823131046463 1.105415232388295 0.8988733011525245 0.8202352678449926 1.116065869047719 1.1069434251404344 1.480613943772779 0.9832035921395342 1.1547906265552843 1.3823967155680321 0.8986595961265055 1.0 12.095338710836666 -6.470333190314455 3.9037123208005116 1.184748917498925 0.9375726634346785 0.18083436902507133 0.17446468874344565 0.23469951580974902 7.266038276764693 0.025188509550264693 0.059704843782265975 3.385842949194966e-07 6.470333190314455 -0.24717625406424648 SRT(ph)DSLAAT(ph)PPAAK ddPTM_A549_MK2206_60min_R1 1 SRTDSLAATPPAAK 14 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 S(0.281)RT(0.36)DS(0.36)LAAT(1)PPAAK 61.102 0.0017874000000000002 5117700.0 1170.2 1467.3 1168.2 1025.8 1396.3 1289.6 1531.9 1241.4 2268.6 2088.1 2234.6 True False 1367.7011513568286 1541.9793026549773 1333.8683260917517 1277.121046049912 1190.9061196674256 1426.0646160328022 1810.2264007652177 1417.3722516280545 1754.7657222097794 1616.3967597515664 1679.6871481774576 0.814259460662571 0.9180157771214121 0.7941171232625455 0.7603326889984545 0.7090047220755465 0.8490060887708475 1.0777164085165511 0.8438310986459427 1.0446979511117804 0.9623201329518033 1.0 10.713976832068736 -7.634422059041009 5.525289399868442 1.009077673114265 0.8011887229899839 0.5883166246984712 0.07381198480567404 0.09832255454075164 4.441150023140332 0.011215010504577239 0.016707542012549172 2.3204805948547218e-08 7.634422059041009 -0.2078889501242811 SRT(ph)GS(ph)ES(ph)SQTGTSTTSSR ddPTM_A549_PD325901_60min_R1 1 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 3 S(0.101)RT(0.842)GS(0.693)ES(0.697)S(0.649)QT(0.014)GT(0.003)S(0.001)T(0.001)TSSR 81.317 0.0088682 4592600.0 529.03 462.24 272.73 428.52 297.92 328.26 484.77 374.81 260.69 555.58 315.48 True False 582.736736148698 501.19458703142124 291.23909785871956 454.9887071604687 276.9951269682047 325.586759394256 503.2181876263223 367.3341205172431 249.73410587389495 520.5005839841243 276.6779599924918 2.106191386420919 1.811472757154282 1.0526284705388997 1.64447036971364 1.0011463398664697 1.1767715773352216 1.8187866776232486 1.3276594945517575 0.9026165505943153 1.8812506207514652 1.0 8.112063914040752 -2.0000000000000004 0.24992918573889297 0.9506880536698715 7.581539859365269 0.04701736948296065 0.4022305334242981 27.084212588929276 0.328857969812128 0.14318217405758726 76.71235432921164 0.00999999999999999 2.0000000000000004 6.630851805695397 SRT(ph)LEGK ddPTM_A549_MK2206_60min_R1 1 SRTLEGK 7 1 E9PD43;A0A0A0MSN9;A0A0A0MT02;A0A0G2JI50;A2ABK4;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.105)RT(0.895)LEGK 45.997 0.026139 5565900.0 2003.3 1662.3 1720.3 1242.4 1777.0 1202.4 1148.5 1567.1 1920.9 2568.0 2881.9 True False 2341.4080640173775 1746.903969742634 1964.264407957232 1546.7880557734563 1515.6056539776657 1329.6371699114768 1357.1675835752033 1789.2412240424724 1485.8192170469754 1987.8870164465416 2166.2446936062897 1.080860380606164 0.8064204265098271 0.906760170609901 0.7140412439734205 0.6996465627595088 0.6137982351836452 0.6265070550805769 0.8259645040670844 0.6858962985263842 0.9176650367863917 1.0 11.080980500052256 -4.463515380491433 1.4075847659653478 0.7986746368196146 2.692875073143938 0.3270473321374301 0.12105665948922098 12.319962422856733 3.993382758489743 0.021939484878952968 56.85935783379368 3.439415305133774e-05 4.463515380491433 1.8942004363243234 SRT(ph)LEGK ddPTM_A549_PD325901_60min_R1 2 SRTLEGK 7 1 E9PD43;A0A0A0MSN9;A0A0A0MT02;A0A0G2JI50;A2ABK4;P18615-4;P18615;P18615-3 E9PD43;P18615-4 NELFE Negative elongation factor E 1 S(0.165)RT(0.835)LEGK;S(0.171)RT(0.829)LEGK 70.056 0.0085346 37377000.0 7443.4 7031.4 7341.6 6972.8 9711.8 7855.9 7148.6 7182.6 8059.299999999999 7818.299999999999 7750.4 True False 8199.048488458531 7623.960754700443 7839.845124627205 7403.4940196222215 9029.676671891142 7791.924155015339 7420.643884864016 7039.337408359305 7720.595647970701 7324.651203720575 6797.14993383355 1.2062479963325334 1.121640809591584 1.1534018229616398 1.0892056364345486 1.32845041815908 1.1463516666345983 1.091728732939516 1.0356307388954658 1.1358577820301712 1.077606243060982 1.0 12.73071423128324 -14.578240417401435 0.1574572591677605 0.5106626693352847 1.1925921620540119 0.28292968745461067 0.07113305662836439 37.51999194083898 0.4319488373667453 5.752721949530062 0.11695952688158907 2.6409463734650312e-15 14.578240417401435 0.6819294927187272 SRT(ph)PDRER ddPTM_A549_PD325901_60min_R1 1 SRTPDRER 8 2 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 S(0.243)RT(0.757)PDRER 55.721000000000004 0.03792 32077000.0 1534.5 1451.1 1388.5 1320.0 1509.0 1061.1 1213.4 1013.5 1416.8 1480.5 1606.8 True False 1690.281310360806 1573.3892896358932 1482.7319597287878 1401.5334020624912 1403.0130457673895 1052.4587534065838 1259.5766009979575 993.2849474246304 1357.256823054718 1387.020977336289 1409.1737863444143 1.1994839293353747 1.1165331805649579 1.0521995044877988 0.9945781106943925 0.9956281186630596 0.7468622845566855 0.8938404994500132 0.7048704404311584 0.9631578703827753 0.9842795762859081 1.0 10.460633827634378 -5.900973466160417 1.2125960638631152 0.937808271931048 1.2014078330204279 0.5047851801110634 0.09703667646686903 0.5140023229893007 1.1637268012926143 0.01611831619589479 0.12685332073291739 1.256106704977729e-06 5.900973466160417 0.2635995610893799 SRT(ph)PPSAPSQSR ddPTM_A549_MK2206_60min_R1 2 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.091)RT(0.909)PPSAPSQSR;S(0.169)RT(0.831)PPSAPSQSR 120.59 5.8486e-06 743633000.0 3975.17 3962.44 3703.81 3611.93 5394.2 3561.64 3505.8999999999996 3428.65 5054.9 6045.1 6830.9 True False 4646.081512424482 4164.111271050356 4229.065951773573 4496.8530121457 4600.720325653534 3938.5303807747086 4142.8766488953415 3914.671637300248 3909.9732210165844 4679.507711495716 5134.599006750827 0.9048577126112367 0.8109905497148849 0.8236409398695624 0.8757943913893496 0.896023295997338 0.7670570526727479 0.8068549546806679 0.762410391182125 0.7614953408972854 0.9113677047308328 1.0 12.326035896441933 -10.870962271903261 1.1245461619126282 0.9997817866605846 0.8184393294570921 0.44241633413734005 0.05442798580822078 0.25957961649884115 0.5839537060079373 0.03650458899146984 0.008873986416681263 1.3459772769213248e-11 10.870962271903261 -0.1813424572034925 SRT(ph)PPSAPSQSR ddPTM_A549_PD325901_60min_R1 4 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.117)RT(0.882)PPS(0.001)APSQSR;S(0.139)RT(0.861)PPSAPSQSR;S(0.032)RT(0.964)PPS(0.004)APSQSR;S(0.178)RT(0.822)PPSAPSQSR 106.79 5.5801e-05 993039000.0 7631.469999999999 8086.879999999999 7319.96 7179.85 8336.550000000001 6993.91 7763.889999999999 7853.400000000001 8046.219999999999 8190.780000000001 9348.64 True False 8406.211216408718 8768.389758507825 7816.7365040953055 7623.333027877561 7751.0194875362085 6936.9539157834715 8059.34908251362 7696.757776126882 7708.065354883769 7673.612752952743 8198.816545911657 1.0252956837533433 1.0694701740680106 0.9533981471988325 0.9298089529371089 0.9453827200708933 0.8460921008462601 0.9829893177122516 0.9387644830234522 0.9401436550897578 0.9359415118001625 1.0 13.001199964324186 -5.768997167415179 24.974774582346576 0.9559155037179189 1.047382933467795 0.4857198677183491 0.03983375473554172 111.37056687039144 368030.68256739475 0.006062547132063225 0.019389017475700043 1.702169610364416e-06 5.768997167415179 0.0914674297498762 SRT(ph)PSASNDDQQE ddPTM_A549_MK2206_60min_R1 3 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.017)RT(0.944)PS(0.039)ASNDDQQE;S(0.403)RT(0.597)PSASNDDQQE;S(0.048)RT(0.497)PS(0.403)AS(0.052)NDDQQE 232.59 3.5352999999999995e-46 112445000.0 4767.9 5242.2 5050.1 5180.5 7799.0 6599.4 5718.1 6291.6 8966.3 8764.2 8902.4 True False 5572.604956036766 5509.005588753438 5766.280117784586 6449.722732561486 6651.777431272825 7297.744127672822 6757.004753714729 7183.453567216905 6935.447366238893 6784.361132998752 6691.688386259291 0.8327651609539305 0.8232609277003434 0.8617078060037975 0.9638408665002008 0.9940357421501547 1.0905684345161686 1.0097608202422514 1.0734889541430834 1.036427126594857 1.0138489333917213 1.0 12.708154549215623 -6.3550828620254425 1.7632288927466033 1.0261808249222213 0.825363198214063 0.9041470049610776 0.027484908840630852 0.08398882323592965 0.4990536563348616 0.004318174593848313 0.013957229922306988 4.414862051333068e-07 6.3550828620254425 -0.20081762670815828 SRT(ph)PSASNDDQQE ddPTM_A549_PD325901_60min_R1 2 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.21)RT(0.78)PS(0.005)AS(0.005)NDDQQE;S(0.007)RT(0.988)PS(0.005)ASNDDQQE 188.78 7.7141000000000005e-25 199022000.0 2889.1400000000003 2659.8900000000003 2537.13 2001.41 3433.19 2863.39 2650.84 2621.09 2287.96 2011.6399999999999 2706.3100000000004 True False 3182.4433659275464 2884.0482651847674 2709.314898802087 2125.0325501680995 3192.054578262522 2840.0715011939287 2751.7191667953066 2568.810303744674 2191.8049977952232 1884.6247070913707 2373.4510267125665 1.3408506559056765 1.2151286176649796 1.1415086590409749 0.8953344839440197 1.344900123211639 1.1966000011079527 1.159374739914762 1.0823102203640986 0.9234675470978904 0.794044067427731 1.0 11.212770566471633 -8.497757377403929 2.8609052967791455 0.9640426032010885 1.179810721304041 0.4728076895846526 0.12437922203470897 0.19071234105328952 3.1416845047482176 0.01960905398902455 0.023201886335477373 3.1786493563342507e-09 8.497757377403929 0.2157681181029525 SRT(ph)PSNDGK ddPTM_A549_PD325901_60min_R1 2 SRTPSNDGK 9 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.198)RT(0.802)PSNDGK;S(0.18)RT(0.819)PSNDGK 89.43 0.00043179 30794000.0 5753.200000000001 5549.06 4721.4400000000005 4546.43 5119.639999999999 4546.89 3051.9700000000003 4211.14 4283.72 5815.18 7370.540000000001 True False 6337.260628718007 6016.698760627768 5041.86531072516 4827.252655408311 4760.054148199177 4509.861635356578 3168.1143884520643 4127.145509124579 4103.690145437572 5448.008542375176 6464.010305702616 0.9803914797486029 0.9307996856564066 0.779990295850422 0.746789133542943 0.736393341452412 0.6976878782785868 0.4901159247312959 0.6384806511653561 0.6348520425187526 0.8428217599790778 1.0 12.658213782871567 -5.71471894181495 3.389880634573327 0.7660826358891284 0.9710062909047632 0.29232431372893153 0.12662092218757273 0.3382669744398082 7.721246548146636 0.024098586590988635 0.10751680392905774 1.928772734686788e-06 5.71471894181495 0.2049236550156348 SRT(ph)PVQDHR ddPTM_A549_MK2206_60min_R1 1 SRTPVQDHR 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.049)RT(0.951)PVQDHR 102.57 0.00027204 1222400000.0 4869.5 5512.5 4391.3 4530.9 6265.5 4883.8 5088.8 5000.5 7469.9 7216.0 7773.3 True False 5691.352552155256 5793.06270420879 5014.052371483229 5640.970703399827 5343.853249857663 5400.600474395931 6013.369089505867 5709.33618838899 5777.979576979123 5585.900588270343 5842.9750778339885 0.9740504582581687 0.9914577123878986 0.8581334516562675 0.9654278220010746 0.91457745047214 0.9242894933582282 1.0291622006601207 0.9771282800859492 0.988876300174301 0.9560028091615712 1.0 12.512487420400285 -7.748275573623909 24.9997943451945 0.9953584810855283 0.9369729754603628 0.32581993069526616 0.037073114198953344 173.69599142876316 329870.6821327092 0.0051031931407441835 0.007543699931255751 1.7853543513923545e-08 7.748275573623909 -0.058385505625165424 SRT(ph)PVQDHR ddPTM_A549_PD325901_60min_R1 5 SRTPVQDHR 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.223)RT(0.777)PVQDHR;S(0.036)RT(0.964)PVQDHR;S(0.125)RT(0.875)PVQDHR;S(0.041)RT(0.959)PVQDHR;S(0.382)RT(0.618)PVQDHR 122.69 0.00030215 2195218000.0 6280.67 6747.619999999999 6439.0199999999995 6715.99 8359.97 7269.030000000001 6619.75 7562.11 7431.12 7254.8099999999995 8294.58 True False 6918.278994815119 7316.265618174451 6876.010618172747 7130.82144918005 7772.794547530823 7209.833429719212 6871.66820871619 7411.277783689469 7118.815868815903 6796.740058486381 7274.399243674795 0.9510447204050111 1.0057553033724482 0.9452341544425881 0.9802625908085003 1.068513603276503 0.9911242410826263 0.9446372103773675 1.018816473419945 0.9786122029260115 0.9343369577077109 1.0 12.828612392619954 -3.402393751569483 0.8973731220196819 0.9920558985499309 2.921758784087547e-10 0.045371841436366744 0.03700565857059102 101.07605310435419 3.5133831988180937 0.004797789175152474 188.25636761498075 0.0003959189129875588 3.402393751569483 -0.9920558982577551 SRT(ph)S(ph)PAPWK ddPTM_A549_PD325901_60min_R1 1 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.421)RT(0.773)S(0.805)PAPWK 48.115 0.01757 41133000.0 8128.6 6979.5 8413.3 6554.1 7216.6 5960.7 5917.1 6292.7 9555.5 8263.5 11003.0 True False 8953.809488040954 7567.686959557384 8984.277131282832 6958.9318715589225 6709.730911918457 5912.158035463785 6142.278478461363 6167.187161972347 9153.915565146355 7741.741199742268 9649.70075376375 0.9278846791750126 0.7842405845181987 0.9310420458145942 0.7211551994340006 0.6953304649681917 0.6126778629024138 0.636525280441017 0.6391065712133001 0.9486217032767551 0.8022778526808404 1.0 13.236268488415343 -8.857667308573575 6.546235742111489 0.9772862621878234 0.7411564889159326 0.27622316437722405 0.1146610057646397 0.13166208193027082 7.634136632110498 0.019160982698113314 0.02034150647400264 1.387818560618071e-09 8.857667308573575 -0.23612977327189089 SRT(ph)S(ph)PITR ddPTM_A549_PD325901_60min_R1 1 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.507)RT(0.816)S(0.676)PIT(0.001)R 50.108000000000004 0.017031 69700000.0 2161.4 2188.4 2174.5 2402.0 2369.5 1538.5 2128.7 1925.0 2096.3 2329.4 2137.2 True False 2380.823736861419 2372.824148190469 2322.074646330753 2550.3660846622006 2203.074494331232 1525.9709660880492 2209.7088433693366 1886.6043648667132 2008.1998010796192 2182.3212864621096 1874.337948827037 1.2702211670800037 1.2659532127999569 1.238877251449724 1.3606756915198899 1.175388086075896 0.8141386493524306 1.1789276553634178 1.0065443993423664 1.0714182052048582 1.1643157989880155 1.0 10.872165383411687 -7.006242454415227 24.626671956766305 1.0291871690099808 1.2780047996417319 0.5939625832066753 0.09469911156535527 100.49840623422699 396472.6932747509 0.011332481902294474 0.020898504656998 9.857290271539625e-08 7.006242454415227 0.2488176306317511 SRT(ph)S(ph)PVTR ddPTM_A549_PD325901_60min_R1 2 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.494)RT(0.796)S(0.705)PVT(0.004)R;S(0.209)RT(0.804)S(0.986)PVT(0.002)R 53.123999999999995 0.013681 485020000.0 4337.700000000001 3637.6 3950.3999999999996 3756.3999999999996 4485.6 3493.0 3239.8 3307.8 3917.3999999999996 4924.1 4732.1 True False 4778.060110754036 3944.1533181583095 4218.497899684983 3988.4242965966237 4170.546930479926 3464.554166100457 3363.092361886584 3241.8233340811007 3752.7653011254574 4613.191485647835 4150.081699253426 1.1513171202421337 0.950379680204329 1.0164855068862535 0.9610471758457468 1.0049312839383815 0.8348158945217172 0.8103677483003728 0.7811468710758838 0.9042629936178259 1.1115905227787972 1.0 12.0189240225548 -2.000000033887917 0.7525121081515612 0.9262612872672682 39.18522430679544 0.30938684478549094 0.09359815126464434 324.0628726991653 1.2935876716722425 0.013827649667493674 21046.033920969578 0.009999999219701907 2.000000033887917 38.258963019528174 SRT(ph)S(ph)VQTEDDQLIAGQSAR ddPTM_A549_MK2206_60min_R1 2 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 2 S(0.584)RT(0.725)S(0.685)VQT(0.006)EDDQLIAGQSAR;S(0.606)RT(0.684)S(0.652)VQT(0.059)EDDQLIAGQSAR 80.061 0.00014452 12345600.0 540.03 752.5699999999999 487.48 568.49 1113.02 820.53 681.56 764.96 1229.75 638.1600000000001 1077.94 True False 631.1738615341208 790.8725985136347 556.6119941818241 707.7700755204856 949.2962324086789 907.3579399762674 805.3906297444628 873.3954225917489 951.2135885072192 493.99921277863126 810.2577483694662 0.7789791122692409 0.976075329245735 0.6869567064331445 0.8735122582224939 1.1715978456472755 1.1198386461619185 0.9939931230095636 1.0779229502579133 1.173964198949541 0.6096815658631314 1.0 9.662237101653236 -6.651696186685923 5.823860913630188 1.084574263676953 0.8229806809656597 0.18262141562663592 0.1657410284334486 0.10054990230942097 4.805930906567259 0.012999775924933493 0.02729416995990703 2.2299946098689368e-07 6.651696186685923 -0.2615935827112934 SRT(ph)SPITR ddPTM_A549_PD325901_60min_R1 1 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.049)RT(0.475)S(0.475)PIT(0.001)R 95.64200000000001 0.0096248 56209000.0 5482.7 4594.8 4450.5 4424.0 5388.3 4261.5 4656.8 4829.7 4620.9 5137.1 6397.2 True False 6039.299667849587 4982.019921452005 4752.537693030589 4697.2604323670175 5009.844396625864 4226.795756895821 4834.01707229874 4733.367844673646 4426.699642612608 4812.7426292970285 5610.384955191992 1.0764501395328794 0.8879996579987828 0.8470965416789218 0.8372438736169171 0.8929591171795844 0.7533878317893743 0.8616194986451363 0.8436796908727747 0.7890188780212003 0.8578275230192886 1.0 12.453884049059903 -4.055900860365791 12.124590051763356 0.8842299274963806 50.164121488434056 0.0 0.08689897209014397 0.0 0.0 0.013033841596474834 0.0 8.792232007490509e-05 4.055900860365791 49.27989156093768 SRT(ph)SVQTEDDQLIAGQSAR ddPTM_A549_MK2206_60min_R1 2 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.069)RT(0.465)S(0.465)VQT(0.002)EDDQLIAGQSAR;S(0.081)RT(0.459)S(0.459)VQT(0.001)EDDQLIAGQSAR 94.01 1.2592e-05 7136900.0 662.76 875.69 683.13 583.13 1025.27 832.6 763.1099999999999 888.28 1179.22 917.1800000000001 1314.27 True False 774.6176850737072 920.258880625596 780.0081061488257 725.9968761777004 874.4541411669563 920.70517936485 901.7572091441648 1014.196410243409 912.1285528273905 709.9884009908255 987.9004869932821 0.7841049733979681 0.9315299392415969 0.7895614147562718 0.7348886712135382 0.8851641968801892 0.9319817041158225 0.9128016647594758 1.026617987941437 0.9233000335929515 0.7186841289568607 1.0 9.948221913617136 -7.222505137792449 2.1431638313744523 0.9641648364341411 0.8175067016126039 0.143490965719132 0.09192786762321363 0.1712316707305996 1.5351918232569852 0.008685021590677666 0.01603601973613443 5.990938511667739e-08 7.222505137792449 -0.14665813482153722 SRT(ph)SVQTEDDQLIAGQSAR ddPTM_A549_PD325901_60min_R1 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.105)RT(0.444)S(0.444)VQT(0.006)EDDQLIAGQSAR 69.188 0.0049894 2889600.0 521.33 581.46 464.82 617.47 704.68 210.7 482.77 840.52 579.35 830.47 662.83 True False 574.2550378171383 630.4616748340471 496.36548038972614 655.6097195238832 655.1857078140257 208.98412905736234 501.14207653188083 823.755169224816 555.0019342438954 778.0339824711035 581.3061120255594 0.9878702906049763 1.084560547002001 0.853879685971548 1.1278218239258024 1.1270924118293426 0.3595078818785472 0.8620966925423384 1.417076394319068 0.9547498688943642 1.3384238809395044 1.0 9.183154267349526 -7.250475516727611 0.0030945683364615715 1.9084486800122251 0.036133883602880376 0.0 0.26688021456936306 440993.57981088536 455.6495793247449 136498.4390874271 139181.28187433883 5.6172594466095376e-08 7.250475516727611 -1.8723147964093447 SRT(ph)TPGPEEGPSQK ddPTM_A549_MK2206_60min_R1 1 SRTTPGPEEGPSQK 14 1 Q9BWN1;H3BND2 Q9BWN1 PRR14 Proline-rich protein 14 1 S(0.067)RT(0.467)T(0.467)PGPEEGPSQK 52.265 0.0087914 2208700.0 1057.6 1066.8 985.55 887.99 997.61 1085.3 935.02 489.19 1239.2 1262.6 1395.9 True False 1236.097024162521 1121.095563328787 1125.3158096042846 1105.5475898633852 850.8628905259757 1200.145725636166 1104.9010309050811 558.5341805815438 958.5231785957689 977.3777830862164 1049.2595051198932 1.1780660724357972 1.0684635763206027 1.0724856950194612 1.053645532367191 0.8109174959808938 1.143802576750574 1.0530293273624718 0.532312719452299 0.9135234648041083 0.9314929036306768 1.0 10.035155817151786 -6.541830370132949 23.013315790669434 0.938098405147655 1.0959701145899705 0.24427835008990506 0.15041988842319332 120.46493127083103 146282.3118965025 0.02158063154173678 0.04493232113557889 2.871902091192525e-07 6.541830370132949 0.15787170944231554 SRT(ph)TPLGGLGPGEAR ddPTM_A549_MK2206_60min_R1 1 SRTTPLGGLGPGEAR 15 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 S(0.311)RT(0.345)T(0.345)PLGGLGPGEAR 45.70399999999999 0.015816 3109200.0 364.04 555.28 582.17 525.78 679.57 391.58 523.88 432.47 783.12 746.79 648.4 True False 425.481052076517 583.5413802073577 664.7304600246825 654.5961236031611 579.6061532209357 433.0167356902327 619.0622147874423 493.77394688382856 605.7445703856665 578.08962033182 487.3843850703767 0.872988682259648 1.197291907747714 1.3638731161415802 1.3430798024205055 1.1892177324007671 0.88845016162696 1.270172442430735 1.0131099025926513 1.2428477172041508 1.1861061577677459 1.0 8.928916220190924 -7.021531567538999 24.62406333856341 1.1049481364872085 1.2140727224836738 0.07407882567928159 0.1580922166419844 1243.1816160360752 1421735.3774452251 0.02392718678586156 0.04172053659935334 9.516306744727324e-08 7.021531567538999 0.10912458599646535 SRT(ph)TPLGGLGPGEAR ddPTM_A549_PD325901_60min_R1 1 SRTTPLGGLGPGEAR 15 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 S(0.278)RT(0.361)T(0.361)PLGGLGPGEAR 53.327 0.0071182 7795200.0 1400.7 1919.7 1832.3 1350.8 1840.4 1712.5 1594.0 1851.6 1698.0 1665.8 2162.6 True False 1542.8980328591595 2081.479856187735 1956.6508965149844 1434.2358481106164 1711.1366530353246 1698.5539677775646 1654.6605422702692 1814.6683854479 1626.6389649540586 1560.621103712793 1896.6139098509032 0.8135013799305363 1.0974715757259024 1.031654827770825 0.756208651988303 0.9022061074991486 0.8955718182574605 0.8724287709143426 0.9567937765417711 0.8576542418598692 0.8228459654371494 1.0 10.88921030656679 SRTDS(ph)LAAT(ph)PPAAK ddPTM_A549_MK2206_60min_R1 1 SRTDSLAATPPAAK 14 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 S(0.261)RT(0.323)DS(0.418)LAAT(0.998)PPAAK 47.754 0.01652 5044200.0 1401.6 1558.2 1422.2 1173.0 1671.9 1489.8 1328.8 1524.2 2463.5 2035.6 2254.3 True False 1638.1558141699988 1637.5057243896842 1623.8893454611268 1460.3850526579715 1425.9657247525386 1647.4496471507966 1570.2257597341998 1740.2600176667313 1905.521183401125 1575.756546214401 1694.4950944851175 0.96675158252244 0.9663679344479013 0.9583322788872135 0.8618408264567554 0.8415283876556909 0.9722363036119523 0.9266629126544166 1.0270079998051098 1.1245362642847478 0.929926885797922 1.0 10.726639744929118 -8.33154394504284 3.7578483824404882 1.0594389891277927 0.9256988553277022 0.2808380031550687 0.062142301901200174 0.14479987258234223 4.0250687955319515 0.01009989881362876 0.012418914110670849 4.6607526476447985e-09 8.33154394504284 -0.13374013380009042 SRTDSLAAT(ph)PPAAK ddPTM_A549_MK2206_60min_R1 2 SRTDSLAATPPAAK 14 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(0.039)RT(0.039)DS(0.142)LAAT(0.78)PPAAK;S(0.007)RT(0.005)DS(0.021)LAAT(0.967)PPAAK 79.805 0.00022116 54645000.0 3682.7 3841.2 3939.2 3517.7 6071.6 5418.9 5062.5 4602.0 8424.3 8405.2 8284.1 True False 4304.249726629462 4036.7006729082664 4497.837793306473 4379.536657915555 5178.475682999882 5992.324401225301 5982.290719938581 5254.347593033919 6516.209500842745 6506.459482335075 6226.929340471176 0.6912315029262514 0.648265052033306 0.7223203520350422 0.7033220418049848 0.8316258945389029 0.9623241365979394 0.9607127996551051 0.8438103767910005 1.0464563100935524 1.044890527349833 1.0 12.604305193116039 -7.06100675785565 0.7341144270259968 1.015238855227678 0.6489808172197529 0.8581654124190983 0.05410687225082165 0.18004498913432598 0.18189570749071396 0.010259202237442656 0.032928190621340725 8.689469078999993e-08 7.06100675785565 -0.3662580380079252 SRTDSLAAT(ph)PPAAK ddPTM_A549_PD325901_60min_R1 2 SRTDSLAATPPAAK 14 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SRTDS(0.001)LAAT(0.999)PPAAK;SRTDSLAAT(1)PPAAK 92.977 2.3485e-05 120306000.0 3988.3 4166.3 3986.4 4763.7 3995.3 4721.0 4517.7 4617.7 4639.9 5400.1 4926.6 True False 4393.18927996872 4517.408722631123 4256.941076170569 5057.942929852337 3714.683911036748 4682.553741242562 4689.623545680298 4525.596350984429 4444.90113868689 5059.136764413167 4320.659432290514 1.0167867541551998 1.0455368661714461 0.9852526316599396 1.1706414284939295 0.8597492973584082 1.0837590452622639 1.0853953242952512 1.0474318612483815 1.0287552648718048 1.1709177369092392 1.0 12.077035802396182 -10.022518121736912 0.9818916062999936 1.003385238593761 1.0363218276652395 0.0 0.08796350502626044 1.4435488080641516 2.809004884454227 0.02475947855815226 0.012744263785614808 9.494713799340472e-11 10.022518121736912 0.03293658907147856 SRTGS(ph)ESS(ph)QTGTSTTSSR ddPTM_A549_MK2206_60min_R1 4 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.091)RT(0.142)GS(0.766)ES(0.014)S(0.984)QT(0.002)GTSTTSSR;S(0.01)RT(0.089)GS(0.881)ES(0.051)S(0.953)QT(0.016)GT(0.001)STTSSR;S(0.019)RT(0.033)GS(0.947)ES(0.021)S(0.975)QT(0.004)GT(0.001)STTSSR;S(0.004)RT(0.024)GS(0.938)ES(0.048)S(0.729)QT(0.231)GT(0.022)S(0.003)T(0.001)TSSR 133.16 4.734e-13 650110000.0 2335.17 2652.68 2471.1 2199.69 3602.7799999999997 2238.7200000000003 2625.72 2595.16 5881.630000000001 5850.22 5697.54 True False 2729.28960657488 2787.690081487633 2821.5391376522207 2738.6141487478358 3072.8158345738075 2475.619864457935 3102.779336129805 2963.031877344179 4549.450196033111 4528.651238845753 4282.683573895551 0.6372849078112732 0.6509213285052334 0.6588250308405892 0.6394621740071211 0.7174977514807984 0.5780534148139501 0.7244941828161965 0.6918633670264344 1.0622895942543118 1.0574330698745669 1.0 12.064299372295952 -8.734984865962293 6.708771676690152 1.0295900943010807 0.6610945240609901 0.9432991376858244 0.04122320867081825 0.02573283813772081 3.93425368993202 0.007060560980195028 0.007904952926792374 1.8408361487225867e-09 8.734984865962293 -0.3684955702400906 SRTGS(ph)ESS(ph)QTGTSTTSSR ddPTM_A549_PD325901_60min_R1 4 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.039)RT(0.039)GS(0.92)ES(0.012)S(0.865)QT(0.102)GT(0.01)S(0.009)T(0.002)T(0.002)SSR;S(0.314)RT(0.047)GS(0.639)ES(0.082)S(0.902)QT(0.015)GTSTTSSR;S(0.02)RT(0.029)GS(0.946)ES(0.008)S(0.987)QT(0.009)GTSTTSSR;S(0.019)RT(0.191)GS(0.78)ES(0.314)S(0.691)QT(0.006)GTSTTSSR 135.27 2.7054e-12 1135740000.0 3308.89 3946.9700000000003 3018.5499999999997 3755.31 4483.01 4375.05 4043.3499999999995 4665.049999999999 4676.4 5140.49 5017.16 True False 3644.8060769239264 4279.595013792418 3223.4069550157233 3987.2669697721904 4168.138843144908 4339.421043343204 4197.221896856017 4572.001918089072 4479.867170619057 4815.918584118485 4400.0811263976475 0.828349744521173 0.9726172974669967 0.7325789826186071 0.9061803305968977 0.947286816631349 0.9862138716737465 0.9538964796979297 1.0390721867967412 1.0181328575381814 1.094506770619769 1.0 12.103314408314885 -6.928972324951703 1.6427386816294596 1.006657603361973 0.8543328677763199 0.5812525218566816 0.062227257936157236 0.18190315908096746 0.9840815646358984 0.007965524492975032 0.017912570298494343 1.1776810178558544e-07 6.928972324951703 -0.15232473558565307 SRTPS(ph)ASNDDQQE ddPTM_A549_MK2206_60min_R1 2 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.001)RT(0.004)PS(0.947)AS(0.048)NDDQQE;SRT(0.005)PS(0.993)AS(0.002)NDDQQE 176.0 4.5027e-22 465070000.0 3875.5299999999997 4912.38 4452.26 3962.7599999999998 6415.6 4490.3 3541.42 3999.62 6518.25 7362.91 6524.5 True False 4529.624716388592 5162.399159528562 5083.657416131875 4933.636377895055 5471.873738693929 4965.460565580092 4184.8501731170145 4566.578383322538 5041.876782506348 5699.62351723692 4904.286582960629 0.9236052257072912 1.0526299946387137 1.0365742968191234 1.0059845187343657 1.1157328688142565 1.0124735742058806 0.8533045739326873 0.9311401986964998 1.0280550896074794 1.1621717900906516 1.0 12.259827570325324 -7.523856235027657 24.999996692491813 0.9925053168612519 1.0313488039120124 0.03216335543788984 0.08152081953057093 76.22449455650786 1949508.3814584299 0.010288061031480658 0.015333418242387896 2.9932553331757395e-08 7.523856235027657 0.03884348705076057 SRTPS(ph)ASNDDQQE ddPTM_A549_PD325901_60min_R1 3 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.006)RT(0.007)PS(0.986)AS(0.001)NDDQQE;SRT(0.001)PS(0.979)AS(0.02)NDDQQE;S(0.092)RT(0.092)PS(0.792)AS(0.024)NDDQQE 189.43 1.4729e-25 458666000.0 4895.150000000001 5820.75 4413.55 5102.51 5950.39 6200.43 6208.9800000000005 6857.43 8903.640000000001 10934.84 11976.13 True False 5392.102024381035 6311.285030423898 4713.080043832184 5417.680454059003 5532.455134131091 6149.935753826014 6445.266131584225 6720.653179100232 8529.450974042144 10244.412336248533 10503.141932943081 0.5133799065847829 0.6008949579771522 0.44873049168740825 0.5158152187838632 0.5267428707955053 0.585532957003728 0.6136512457637712 0.6398707379189953 0.8120856624139811 0.9753664571662083 1.0 13.358533342967005 -8.908524655023411 0.5885888653790201 0.9783618878612064 0.5100937060517079 0.9475003678864551 0.04112635469208508 0.10101517235649013 0.0785797529387445 0.015279563343619988 0.013551017436290171 1.2344552328006246e-09 8.908524655023411 -0.4682681818094985 down SRTS(ph)PAPWK ddPTM_A549_PD325901_60min_R1 2 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.189)RT(0.189)S(0.622)PAPWK;S(0.169)RT(0.169)S(0.662)PAPWK 56.086999999999996 0.004548600000000001 89590000.0 8158.200000000001 7108.4 5863.4 6370.7 7103.299999999999 5791.0 4709.6 5379.6 7598.1 6718.4 9136.9 True False 8986.414458250583 7707.449814931971 6261.325583488492 6764.203670090536 6604.388713054676 5743.840015999927 4888.826405192005 5272.29965778544 7278.778280104495 6294.199077430685 8013.119223581207 1.1214627172655984 0.9618538798537148 0.7813843035134816 0.8441411492025065 0.8241969860649417 0.7168045121675979 0.6101027912832053 0.6579584691901232 0.9083576665980865 0.785486762621472 1.0 12.968148226723766 -12.848950240506522 12.207682864417574 0.9196613326559833 0.8867734486936182 0.0 0.15341382909765927 0.0 0.0 0.0 0.022344516594883335 1.4159560044851938e-13 12.848950240506522 -0.03288788396236508 SRTS(ph)PAPWKR ddPTM_A549_MK2206_60min_R1 1 SRTSPAPWKR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.106)RT(0.106)S(0.788)PAPWKR 53.967 0.0041339 7830100.0 1797.6 1630.3 1493.4 1179.3 2232.0 1953.7 1631.3 1432.7 2628.4 2566.8 3061.9 True False 2100.9909328995345 1713.2753064256863 1705.186576087503 1468.2285529407886 1903.6757567125205 2160.439237238899 1927.686094110777 1635.7896124597346 2033.0715966923146 1986.9580972799777 2301.545725859018 0.9128608262238068 0.744402028243967 0.7408875508875963 0.637931515522158 0.827129235506282 0.9386905560751119 0.8375615015822884 0.7107352220209312 0.8833505125923581 0.8633146302311133 1.0 11.168387390189226 -9.618575606609276 0.42960897595441955 1.0158380747566849 0.774143057422902 0.1764786170112531 0.09394377787335702 0.7429579360011896 0.3031810826027747 0.07247715916165964 0.031755572233695045 2.40671349625683e-10 9.618575606609276 -0.24169501733378285 SRTS(ph)PAPWKR ddPTM_A549_PD325901_60min_R1 1 SRTSPAPWKR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.115)RT(0.115)S(0.77)PAPWKR 43.99100000000001 0.012623 9678800.0 2053.8 1946.5 1819.1 2016.0 1898.1 2043.8 1699.7 1537.6 2009.2 2191.2 2743.0 True False 2262.3002640723503 2110.538386242343 1942.5550651369365 2140.5237413318036 1764.7840040895176 2027.1559704197305 1764.383013611528 1506.9313617761347 1924.7603111812102 2052.847258047469 2405.628389309639 0.9404196733484591 0.87733350488436 0.8075042154347065 0.88979817117393 0.7336062427314348 0.8426721181992197 0.7334395542770703 0.6264190132078505 0.8001070820974029 0.8533517758478856 1.0 11.232198083324551 -10.499742196333122 0.988678386521007 0.9917975625002065 0.8044321166306572 0.1470553668462703 0.09194133290818066 0.3918147544812606 0.7256679009000645 0.04633568382442636 0.015765453586743777 3.164155392512802e-11 10.499742196333122 -0.18736544586954929 SRTS(ph)PITR ddPTM_A549_MK2206_60min_R1 1 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.405)RT(0.165)S(0.424)PIT(0.006)R 64.39 0.007844499999999999 32477000.0 3440.1 3442.5 2922.4 2614.7 3743.8 2806.9 3193.2 2945.2 4803.8 5025.9 4370.8 True False 4020.7047776299996 3617.7085458936544 3336.840263799463 3255.301617378344 3193.09197938187 3103.924294930577 3773.3631065497057 3362.691119296717 3715.7469700922784 3890.5456993608545 3285.4097320567594 1.2238061933033006 1.1011437966456825 1.0156542215239945 0.9908358113191663 0.9719006881321022 0.9447601815519773 1.148521315235611 1.0235226025192228 1.130984343851114 1.1841888886489853 1.0 11.681857588708896 -6.522219359310753 0.004185338312395463 0.010950070081396472 2.124883596424742 0.0 0.0911743258163105 83416.21351211391 80.11893911491401 19827.415205164823 20642.97695104886 3.00455833648022e-07 6.522219359310753 2.1139335263433456 SRTS(ph)PITR ddPTM_A549_PD325901_60min_R1 2 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.301)RT(0.096)S(0.602)PIT(0.001)R;S(0.059)RT(0.2)S(0.682)PIT(0.059)R 79.48899999999999 0.0027245999999999998 281522000.0 6577.7 6296.4 6216.8 6125.8 7464.5 5854.0 6668.3 7198.5 6044.799999999999 7098.3 7516.5 True False 7245.463261753189 6827.019725217718 6638.709432655334 6504.176753298792 6940.219271127027 5806.326964887517 6922.065805533775 7054.920270385994 5790.758077358241 6650.112126596546 6592.018151019293 1.0991267159409832 1.0356494124886606 1.007083002589855 0.9866745819401425 1.0528216264170773 0.8808117380547126 1.050067770894024 1.0702216087337568 0.8784499594350849 1.0088127754272445 1.0 12.68650449962701 -2.0000000000497242 0.3313090209822706 0.9529516951239555 2.43081769806654 0.12329157633997534 0.0632335867592214 50.24005324363041 0.6244958504353794 0.01952231603039466 46.26570447374937 0.009999999998855057 2.0000000000497242 1.4778660029425845 SRTS(ph)PVTR ddPTM_A549_MK2206_60min_R1 3 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.024)RT(0.034)S(0.942)PVTR;S(0.073)RT(0.113)S(0.811)PVT(0.002)R;S(0.023)RT(0.075)S(0.882)PVT(0.019)R 76.92699999999999 0.0012720999999999998 1524020000.0 4055.8999999999996 4259.7 3641.5 3073.9500000000003 5224.8 3721.2 3479.2 4050.6 5384.6 5835.8 6536.599999999999 True False 4740.436762765475 4476.500535350239 4157.919456825126 3827.06788799486 4456.238841250711 4114.974914067354 4111.325604505741 4624.784954442241 4164.996697439293 4517.488726860878 4913.38181901762 0.964801217853099 0.9110833841619232 0.8462439130481537 0.7789070804922795 0.9069596065183654 0.8375035903255125 0.8367608616518547 0.9412630902287417 0.8476843141557521 0.9194255389181425 1.0 12.262500639973176 -10.844437938046124 0.8025407840581598 1.0110917349222495 0.8704655972895787 0.20688305126623996 0.05604118689159166 0.5676038941843097 0.5606407129613459 0.05285781074246773 0.009473005946140391 1.4307444237819765e-11 10.844437938046124 -0.14062613763267073 SRTS(ph)PVTR ddPTM_A549_PD325901_60min_R1 4 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.035)RT(0.03)S(0.928)PVT(0.008)R;S(0.121)RT(0.121)S(0.759)PVTR;S(0.052)RT(0.039)S(0.905)PVT(0.003)R;S(0.267)RT(0.164)S(0.568)PVT(0.001)R 76.92699999999999 0.0012720999999999998 2578700000.0 5338.32 5349.88 4920.29 5050.08 5909.7 5018.8099999999995 5243.34 5292.070000000001 4501.31 6144.0 6058.42 True False 5880.262316536523 5800.733163005496 5254.2104675073515 5362.011972036171 5494.623059358213 4977.938475341149 5442.878172965742 5186.515512301401 4312.135594427179 5756.0667914584 5313.272747488627 1.10671192615058 1.0917439097677175 0.988884011269854 1.009173107962617 1.0341315645720057 0.936887434904226 1.0243927672522315 0.9761432847114542 0.8115780610858636 1.0833373449874306 1.0 12.375385057580258 -6.616663006318283 0.5630647160415384 0.9177871092040409 1.1077474036376649 0.08556052293500427 0.07541302685344449 1.0285522123593864 0.48358121127663223 0.01605090418336583 0.09726775690571139 2.4173358546620965e-07 6.616663006318283 0.18996029443362394 SRTS(ph)VQTEDDQLIAGQSAR ddPTM_A549_MK2206_60min_R1 2 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.158)RT(0.116)S(0.726)VQTEDDQLIAGQSAR;S(0.128)RT(0.367)S(0.505)VQTEDDQLIAGQSAR 216.1 5.372299999999999e-67 138943000.0 6175.200000000001 8062.4 8469.9 7091.0 9723.5 7834.1 6428.9 7813.0 11026.599999999999 9807.1 10181.6 True False 7217.422790855148 8472.741722705294 9671.059180931792 8828.29531832709 8293.186030642566 8663.099262145293 7596.947912970497 8920.516676308996 8529.092705861922 7591.669298673245 7653.227722135326 0.9430560611675378 1.1070808331234805 1.2636575745629939 1.1535388255589378 1.0836193997803434 1.1319536771510312 0.9926462649213936 1.1655888208459169 1.1144438680680235 0.9919565409919744 1.0 12.90185261241817 -10.712202127138669 0.6643725113932525 0.9874941245432333 1.1120604613559568 0.21150069440112051 0.08086148647940158 1.2641190692780422 0.8366188815287469 0.09089367857844675 0.01638249387319197 1.93998277049159e-11 10.712202127138669 0.12456633681272355 SRTS(ph)VQTEDDQLIAGQSAR ddPTM_A549_PD325901_60min_R1 1 SRTSVQTEDDQLIAGQSAR 19 1 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.067)RT(0.373)S(0.559)VQTEDDQLIAGQSAR 140.06 6.9422e-18 3730400.0 412.68 482.58 413.28 460.07 465.07 594.0 716.68 546.59 686.21 553.71 603.88 True False 454.57496980104065 523.2487102146575 441.3276660545291 488.4874790052201 432.40508760440036 589.1626609400726 743.9536495823442 535.6878336584402 657.3709800595556 518.7486561032603 529.6065883107204 0.8583257456275096 0.9879950925151015 0.8333122657371512 0.9223591431582121 0.8164647063467195 1.1124534209805006 1.4047288421303894 1.011482571180085 1.2412439621575775 0.9794981171928137 1.0 9.048777259170768 -7.304124712646102 8.49284904204994 1.1323436827801714 0.8889075726549686 0.4939505491769145 0.1213990649148589 0.24395388230909246 46.05686714861557 0.018878962593015317 0.030297846080836764 4.9644973973740765e-08 7.304124712646102 -0.24343611012520283 SRTS(ph)VTR ddPTM_A549_PD325901_60min_R1 1 SRTSVTR 7 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)RT(0.008)S(0.991)VTR 74.941 0.015249 82875000.0 1221.9 1572.4 1206.2 1390.6 1583.4 1513.3 1072.7 1554.0 1368.7 1660.7 1932.3 True False 1345.946388484763 1704.91166633828 1288.059985469833 1476.4942037182582 1472.1874464334558 1500.9761865330165 1113.5221855039638 1523.0042509105845 1311.1782987824618 1555.8431185831646 1694.6393498589205 0.7942376580579306 1.0060616534604927 0.760079119829871 0.8712734092013011 0.8687320087049885 0.8857201307511084 0.6570850521066119 0.8987188047045971 0.7737211453821239 0.9180968910657534 1.0 10.726762558889998 -10.912818962939799 1.1342254379511547 1.0011380890040453 0.8328368312302693 0.2084937856071858 0.0887795645278136 0.4428812188002264 1.000644483454249 0.05916055469128313 0.013641613171427546 1.2223090774758268e-11 10.912818962939799 -0.16830125777377603 SRTSPVS(ph)R ddPTM_A549_PD325901_60min_R1 1 SRTSPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.003)RT(0.027)S(0.097)PVS(0.873)R 51.762 0.023702 25364000.0 2459.9 2656.3 2571.0 2484.4 3142.1 2738.7 2462.4 2612.8 2351.5 2974.0 3173.0 True False 2709.6272371173327 2880.1557232856594 2745.4835206789435 2637.8557455182213 2921.409735656539 2716.396935213091 2556.107979476982 2560.685654298054 2252.674632561525 2786.221132453986 2782.741115304224 0.9737259503642695 1.0350067088331303 0.9866111890824572 0.9479342979520525 1.049831664034315 0.9761586948472281 0.9185575925188193 0.9202026161237448 0.8095164225563436 1.0012505716506013 1.0 11.442290982393912 -7.721278573588431 3.4765545300326606 0.9087961439870008 0.998414453817639 0.2213456162942825 0.05576620764713293 0.25268839388220604 6.33245145231528 0.011128379224455837 0.0164966793544252 1.899859244437726e-08 7.721278573588431 0.08961830983063823 SRTT(ph)PLGGLGPGEAR ddPTM_A549_MK2206_60min_R1 1 SRTTPLGGLGPGEAR 15 1 Q9HCM7;A0A3B3IRR3 Q9HCM7 FBRSL1 Fibrosin-1-like protein 1 S(0.154)RT(0.154)T(0.692)PLGGLGPGEAR 53.188 0.007220300000000001 2481200.0 713.6 592.59 448.25 511.86 669.04 432.19 519.31 517.0 905.67 771.84 594.24 True False 834.0382341550448 622.7502998434626 511.8185902847352 637.2657229782686 570.625102271929 477.92405893549665 613.6619049424803 590.2863332460964 700.5371910578027 597.4808079338395 446.67380781033427 1.8672199255282782 1.3941947993241044 1.145844196223976 1.4266914957522272 1.2774984615042095 1.0699621302586693 1.3738479718583638 1.3215154390622845 1.5683417715758776 1.3376222144360446 1.0 8.803077849721442 -10.998834164211607 1.2728292029043522 0.9996992067033449 1.3845521725946488 0.051972809762442895 0.2220309162397515 0.4378711170850854 1.26102868207131 0.1455035481295399 0.03307741818292148 1.0026880424321015e-11 10.998834164211607 0.3848529658913039 SRVPVRPPQQYS(ph)DDEDDYEDDEEDDVQNTNSALR ddPTM_A549_PD325901_60min_R1 1 SRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALR 34 2 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 S(0.019)RVPVRPPQQYS(0.981)DDEDDYEDDEEDDVQNTNSALR 210.99 1.9658e-101 35331000.0 1418.1 1693.1 1517.6 1780.4 1619.1 1582.4 1316.9 2000.0 1550.6 1480.3 2147.4 True False 1562.0644680499572 1835.783478934966 1620.5934620701528 1890.371264418227 1505.3800015917693 1569.5134590430478 1367.015350135331 1960.1084310303522 1485.4336743567515 1386.8336053704222 1883.2834134901645 0.8294367469392653 0.9747781272776305 0.8605149126582143 1.0037635604271196 0.7993380023466293 0.8333920682359605 0.7258680984196275 1.0407931259787464 0.7887467514004679 0.7363913447314312 1.0 10.879034410726453 -11.063205516197574 1.3608967268422825 1.0003027615462852 0.8660510938785315 0.0 0.12061175586322773 0.5288120288872572 1.7407897224218583 0.06500097521741569 0.01425840219374316 8.64558696759521e-12 11.063205516197574 -0.13425166766775365 SRVS(ph)VS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.356)RVS(0.647)VS(0.997)PGR 59.57 0.0036066 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SRVS(ph)VS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.021)RVS(0.98)VS(0.999)PGR;S(0.383)RVS(0.649)VS(0.968)PGR 61.343999999999994 0.005756 150740000.0 4138.6 4204.1 4001.5 4676.3 4756.9 4487.2 4427.2 4952.2 4489.5 4546.5 5203.2 True False 4558.747625323707 4558.394261290232 4273.065852974246 4965.144430352144 4422.7917544141155 4450.657730926416 4595.679518656794 4853.424486074255 4300.821927656802 4259.4332140894585 4563.239385802376 0.9990156640713078 0.9989382269693721 0.9364106266852998 1.088074503783478 0.9692219453081432 0.9753285669767323 1.0071090140384371 1.0635919082340348 0.9424931641846284 0.9334231351837138 1.0 12.15584262366394 SRVS(ph)VSPGR ddPTM_A549_MK2206_60min_R1 1 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.336)RVS(0.664)VSPGR 97.779 0.00023791 26046000.0 1514.0 1515.5 1444.9 1372.1 1622.1 1320.6 1112.5 1464.2 1876.2 2001.9 2301.7 True False 1769.526186253837 1592.6324767761303 1649.8085467984695 1708.2645615959098 1383.4912387828765 1460.3450154566663 1314.62684956675 1671.7548339244383 1451.2436956757422 1549.6693996200677 1730.1243663116688 1.0227739812867709 0.920530632240821 0.9535780079877038 0.9873651830230213 0.799648433211911 0.8440693882428081 0.759845289254732 0.9662628112037608 0.8388088879237896 0.8956982687456738 1.0 10.756660031317287 -4.451890772854553 0.8815389306378996 0.903983914564299 1.3600136732208707 0.19816069831455685 0.07456829440107628 12.703318345780689 2.603031522331124 0.013299236388967389 7.886675666876631 3.5327200822450604e-05 4.451890772854553 0.4560297586565717 SRVS(ph)VSPGR ddPTM_A549_PD325901_60min_R1 1 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.024)RVS(0.976)VSPGR 103.43 0.00018157 34414000.0 3181.5 2557.2 2676.1 2950.2 3281.0 2675.0 2858.8 2888.1 2983.3 2897.9 3251.8 True False 3504.4835379034885 2772.704218494181 2857.7162386965865 3132.4271536096676 3050.5538788355266 2653.2156868934235 2967.5931983953865 2830.4945798293793 2857.922275705208 2714.926099441293 2851.8492148585806 1.228846013191925 0.9722478327563597 1.0020572700013162 1.0983845630018698 1.0696757258208687 0.9303492179985374 1.040585590196621 0.9925120041698067 1.0021295168114028 0.9519879540952247 1.0 11.477681989190538 -5.255778562316174 24.767009042980806 1.0076458162615793 1.228846121987995 0.6542894097478195 0.046554946508399093 232.00269592888802 1015015.3664496965 0.005704126745565591 0.07003727629243757 5.549085771298461e-06 5.255778562316174 0.22120030572641558 SRWDETPASQMGGST(ph)PVLTPGK ddPTM_A549_MK2206_60min_R1 2 SRWDETPASQMGGSTPVLTPGK 22 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 SRWDETPASQMGGS(0.098)T(0.902)PVLTPGK;SRWDETPASQMGGS(0.023)T(0.977)PVLTPGK 119.33 1.7314e-15 9925800.0 2697.5 3502.5 2816.8 2722.9 4975.700000000001 3408.3 3469.9 3162.0 4537.3 4898.5 5326.3 True False 3152.7720524568854 3680.7622896129337 3216.2645959041633 3390.0106222356267 4243.781121269933 3768.964043753566 4100.335914886894 3610.223183218872 3509.60879457923 3791.9254478439984 4003.6327115983136 0.7874778431406734 0.9193556339346411 0.8033365764513847 0.8467336707523005 1.0599826275212314 0.9413860649192607 1.0241538648159298 0.9017368583187576 0.8766060843723447 0.9471212074122058 1.0 11.9670939138159 -6.5754545274517 24.940996204036345 0.9506423258618775 0.8416611193045911 0.502376114772197 0.058935750827124114 74.26314111962009 35228.80404158179 0.009326329336859234 0.019414305911454252 2.657941833221689e-07 6.5754545274517 -0.10898120655728638 SRWDETPASQMGGST(ph)PVLTPGK ddPTM_A549_PD325901_60min_R1 2 SRWDETPASQMGGSTPVLTPGK 22 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 SRWDET(0.001)PAS(0.001)QMGGS(0.202)T(0.794)PVLT(0.001)PGK;SRWDETPASQMGGS(0.134)T(0.862)PVLT(0.005)PGK 85.945 1.5273e-06 5962400.0 2111.5 2456.2 2557.7 2068.3 2290.5 2701.7 3020.6 2593.9 3049.2 2922.9 3677.4 True False 2325.857925595856 2663.1925940346487 2731.280902699545 2196.0541935498873 2129.6231817960283 2679.698250945781 3135.550585935741 2542.1626296248164 2921.0527278786317 2738.3475951747646 3225.103112959266 0.7211731979203954 0.8257697508440207 0.8468817296800774 0.6809252655289053 0.6603271607777974 0.830887620361063 0.9722326623717298 0.7882422795754266 0.9057238251208514 0.8490728820952741 1.0 11.655129571764451 -8.673922955325605 0.4682579885018761 0.9920960737918112 0.75227401196715 0.3163096813418892 0.0863315360387891 0.4743890789757042 0.25184339174229675 0.03358967822663648 0.034287815412730675 2.118736969914426e-09 8.673922955325605 -0.23982206182466115 SRYDDS(ph)VPR ddPTM_A549_PD325901_60min_R1 1 SRYDDSVPR 9 1 H7BZ97;P23229-5;P23229-3;P23229 H7BZ97 ITGA6 Integrin alpha-6;Integrin alpha-6 heavy chain;Integrin alpha-6 light chain;Processed integrin alpha-6 1 SRYDDS(1)VPR 77.64 0.00052885 2550500.0 279.9 479.28 265.76 335.65 517.64 296.32 441.5 378.57 292.25 375.46 420.47 True False 308.3152419485104 519.6706076333064 283.7960717447048 356.38233818354183 481.28275216105493 293.906868164583 458.30152409806993 371.0191243675803 279.9677488267511 351.7533915235955 368.75485557893717 0.8360981212422602 1.4092576674480253 0.769606331824841 0.9664478522568313 1.3051563793118097 0.7970250797190332 1.2428352255282074 1.0061403090817294 0.7592245758695375 0.9538949418614441 1.0 8.526518235946147 -8.540641955685123 23.14276979302724 0.886110008045148 1.0527053144762386 0.08219391437295887 0.20461773373216427 154.97772254386288 201910.8713404565 0.03295329945850019 0.03737106383109428 2.879771599248054e-09 8.540641955685123 0.16659530643109066 SS(ph)AEAQTPEDTPNK ddPTM_A549_MK2206_60min_R1 2 SSAEAQTPEDTPNK 14 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7;O43493-4 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 S(0.105)S(0.895)AEAQTPEDTPNK;S(0.162)S(0.838)AEAQTPEDTPNK 233.02 9.5891e-48 13830600.0 3988.9 4263.0 4251.8 4232.9 6500.0 5176.5 4608.0 4877.1 6881.799999999999 6461.1 7136.2 True False 4662.128800758206 4479.968491254798 4854.769173837447 5269.960690022099 5543.858610497935 5724.273794117397 5445.213953081874 5568.44386049234 5323.083287976404 5001.533022571163 5364.08459089948 0.8691378224474335 0.8351785687450488 0.9050508230377053 0.9824529424765097 1.0335143893710128 1.0671483078080093 1.0151245493630052 1.0380976970310216 0.9923563280503374 0.932411288042808 1.0 12.389116273192489 -6.172766469519973 2.4292003167588616 1.0085119330927994 0.8529313038282147 0.7834991804829463 0.03310465878708938 0.08123756369059397 0.9242532919526685 0.003906377849600567 0.012596231773320385 6.717899932897495e-07 6.172766469519973 -0.1555806292645847 SS(ph)AFGT(ph)LNWFTK ddPTM_A549_PD325901_60min_R1 1 SSAFGTLNWFTK 12 0 Q4KMQ2-3;Q4KMQ2;Q4KMQ2-2;Q4KMQ2-4 Q4KMQ2-3 ANO6 Anoctamin-6 2 S(0.248)S(0.749)AFGT(0.67)LNWFT(0.333)K 42.976000000000006 0.036411 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)AIGIENIQEVQEK ddPTM_A549_MK2206_60min_R1 2 SSAIGIENIQEVQEK 15 0 J3KPC5;P47736-3;F2Z357;P47736;A0A0A0MQY8;X6R8W7;P47736-2;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 S(0.059)S(0.941)AIGIENIQEVQEK;S(0.226)S(0.774)AIGIENIQEVQEK 136.26 1.1395e-09 5435300.0 4288.1 5246.4 4633.2 4477.700000000001 6188.5 4959.5 4504.5 3762.5 7093.2 7908.700000000001 7836.8 True False 5011.826446020528 5513.419350813786 5290.257428906266 5574.7367010115895 5278.179847856376 5484.310998150342 5322.909342807578 4295.845897172996 5486.601525512836 6122.119177169304 5890.706275323146 0.8508022997200951 0.9359521750235861 0.8980684457257307 0.9463613428435246 0.8960181684779099 0.9310107721929303 0.9036113997239795 0.7292582071472133 0.9313996096693614 1.0392844068317535 1.0 12.52422490323736 -9.579004801286183 1.5566951808652192 0.9827079614157455 0.8923836465007391 0.3782747772456295 0.06015184626029154 0.30461117238463425 1.4954599220098528 0.014089947231107671 0.010948198841889828 2.636302240367592e-10 9.579004801286183 -0.09032431491500637 SS(ph)AVSPR ddPTM_A549_MK2206_60min_R1 1 SSAVSPR 7 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 S(0.202)S(0.798)AVSPR 70.525 0.0212 511910000.0 1369.3 1289.6 1590.1 978.15 1534.8 1168.1 1322.1 1266.2 1837.6 2368.8 1827.3 True False 1600.404363829179 1355.235131673045 1815.600090154506 1217.7967939108216 1309.0329531372665 1291.707566677973 1562.3084564604042 1445.68772757487 1421.3865340442087 1833.686434796951 1373.5309790855938 1.165175295059324 0.9866796980256471 1.321848664354999 0.8866176391023596 0.953042176019018 0.9404284186862001 1.1374395483241928 1.052533761224165 1.0348412636389708 1.3350164377200275 1.0 10.423673734478214 -6.277694570385228 24.996760187185725 1.0110852057348965 1.1407790991000186 0.09035605938780777 0.1362763383697224 737.7944634363729 1134557.912005379 0.012524040247248054 0.029184695985019157 5.276007808298823e-07 6.277694570385228 0.12969389336512216 SS(ph)DEENGPPSSPDLDR ddPTM_A549_MK2206_60min_R1 1 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 S(0.436)S(0.563)DEENGPPS(0.001)S(0.001)PDLDR 45.723 0.037202 115600000.0 855.55 891.09 657.0 509.38 772.22 685.8 764.67 820.78 965.05 1037.2 797.01 True False 999.9459238107455 936.4426748468775 750.1724792349602 634.178122866937 658.6274609536481 758.3709008028032 903.6006409511975 937.1280785333296 746.4677158681776 802.8957996333152 599.0904206430303 1.6691068482408036 1.5631074084639045 1.2521857358856896 1.058568291220957 1.0993790557470675 1.2658705174901816 1.5082875803310676 1.5642514823179254 1.2460017555729914 1.340191350032824 1.0 9.226629955006551 -14.178563448163485 0.15014237916958958 2.4938502340415086e-14 1.4624430985045322 0.0 0.2168043822333879 46.263481372958466 0.5733656210426935 14.08773178577833 0.43398898733388347 6.628824969133708e-15 14.178563448163485 1.4624430985045074 SS(ph)DGEDEQQVPK ddPTM_A549_MK2206_60min_R1 1 SSDGEDEQQVPK 12 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 S(0.19)S(0.81)DGEDEQQVPK 148.41 4.9973e-12 3989700.0 1732.6 1577.8 1620.4 1608.4 1957.3 2147.9 1819.6 2010.9 2389.1 2126.5 2316.0 True False 2025.0205219969591 1658.103280671317 1850.1970857721906 2002.4580722038206 1669.383762819632 2375.189352339371 2150.1977667160972 2295.9512331229694 1847.9726646087386 1646.1221730816098 1740.8732816517459 1.1632210933099125 0.9524548961416097 1.0627982549176227 1.15026067279514 0.9589346797463142 1.3643665954168611 1.2351259505091507 1.3188502904384654 1.061520493240827 0.9455726562244462 1.0 10.765595477549981 -8.980515292897083 20.435586714691638 1.0271403142876214 1.1475734127913766 0.2152122568671163 0.12522165267416008 23.824476836462676 24989.052127236853 0.02262793803283539 0.02311604592091248 1.0458868607948129e-09 8.980515292897083 0.12043309850375516 SS(ph)DGEDEQQVPK ddPTM_A549_PD325901_60min_R1 1 SSDGEDEQQVPK 12 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 S(0.17)S(0.83)DGEDEQQVPK 139.86 5.0262e-09 3586300.0 2048.1 1811.7 1654.7 2575.3 1948.9 2181.1 2096.6 2154.8 2376.8 2229.0 1985.4 True False 2256.0216042684688 1964.3783171617029 1766.9978925194278 2734.3704320693446 1812.0159873400041 2163.3378447413993 2176.38726030354 2111.820823592103 2276.9113615446436 2088.2605595964815 1741.208386487554 1.2956643339051563 1.1281695702858046 1.0148112691347058 1.570386665541649 1.0406657821096799 1.2424347720409183 1.249929231442452 1.2128478360089716 1.3076616097271012 1.1993168513327788 1.0 10.765873158622608 -10.896063459891975 1.107698416429786 0.9980056211435617 1.2312422360798385 0.04303540036957054 0.15237407681158882 0.5305145961946632 1.1396865821640345 0.09659551225292325 0.022290861326245293 1.2703884601953706e-11 10.896063459891975 0.2332366149362768 SS(ph)DGRPDSGGTLR ddPTM_A549_PD325901_60min_R1 1 SSDGRPDSGGTLR 13 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.133)S(0.843)DGRPDS(0.017)GGT(0.007)LR 122.31 2.1236000000000003e-06 18277000.0 1829.1 1640.8 1694.7 1309.7 1982.4 1561.5 1891.9 1602.1 1871.7 1883.4 1879.6 True False 2014.7888854877483 1779.0759743881017 1809.7125330589665 1390.5971944554883 1843.1630629087297 1548.7836617136745 1963.8972897874037 1570.1448586768634 1793.0389580120807 1764.4818025769462 1648.4211157660952 1.2222537470659527 1.0792606072394828 1.097846002911648 0.8435934126027107 1.1181384691569722 0.9395558252078597 1.1913808134365547 0.9525144052447706 1.0877311269934655 1.0704071827889152 1.0 10.686869133990028 -5.226997774838912 1.805604478052205 1.0341939471355601 1.2925659470704154 0.26458068416619274 0.09172383986679405 0.922645231078439 2.787320701063157 0.01158236879356728 0.4153378874616461 5.929283625134649e-06 5.226997774838912 0.25837199993485527 SS(ph)DGS(ph)LSHEEDLAK ddPTM_A549_MK2206_60min_R1 3 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 2 S(0.439)S(0.561)DGS(1)LSHEEDLAK;S(0.438)S(0.562)DGS(0.997)LS(0.003)HEEDLAK;S(0.463)S(0.544)DGS(0.855)LS(0.139)HEEDLAK 133.14 8.1872e-09 9629700.0 1797.3300000000002 2514.96 2005.23 1863.55 3799.04 2329.38 2039.52 2266.25 3023.0099999999998 2749.97 2672.4100000000003 True False 2100.6753635004 2642.960721737314 2289.601766417532 2320.119833657938 3240.2062485578576 2575.873445482697 2410.074384025509 2587.4978775995482 2338.3030617549966 2128.7498670628893 2008.77684223616 1.045748496961932 1.3157064867370651 1.1397989653588196 1.1549913284918163 1.6130244935275522 1.2823094090507576 1.1997720868499393 1.2880962301014776 1.1640432190327372 1.0597244165226316 1.0 10.972101586671858 -9.618973623156432 0.7650708287195919 1.020199587841388 1.2626673305903258 0.2715977846931379 0.1382324132424239 0.48669221608705804 0.6085972757843181 0.0513850692914942 0.030435151800909888 2.4045088332402077e-10 9.618973623156432 0.24246774274893768 SS(ph)DGS(ph)LSHEEDLAK ddPTM_A549_PD325901_60min_R1 4 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 2 S(0.435)S(0.566)DGS(1)LSHEEDLAK;S(0.468)S(0.525)DGS(0.503)LS(0.503)HEEDLAK;S(0.412)S(0.588)DGS(0.983)LS(0.017)HEEDLAK;S(0.465)S(0.54)DGS(0.854)LS(0.141)HEEDLAK 140.27 3.1347e-10 15812000.0 2766.66 3020.4400000000005 3351.09 2897.52 3860.83 2687.32 3060.15 3369.21 3102.71 2732.0 3013.84 True False 3047.5292864925536 3274.9830790351 3578.515119141192 3076.4932296546267 3589.6586199404346 2665.4353568981055 3176.605682828332 3302.0084634558884 2972.3138886646707 2559.501053753962 2643.1567863058567 1.1529884652631062 1.2390423057772142 1.353879246846577 1.1639465526955788 1.3580952286063337 1.0084287737706947 1.2018226460444055 1.249266967651533 1.1245318113795484 0.9683500680000091 1.0 11.368046289708582 -9.587925807614813 0.34265850302602424 0.9674766994439009 1.2503053626867344 0.4801275113414316 0.09200034972733247 0.97596398011689 0.26374372985768996 0.1054149106374773 0.04568088603052134 2.582701366878353e-10 9.587925807614813 0.2828286632428335 SS(ph)DPLDSGTR ddPTM_A549_MK2206_60min_R1 1 SSDPLDSGTR 10 0 E7ER60;A0A1W2PR85;O15056-2;O15056 E7ER60 SYNJ2 Synaptojanin-2 1 S(0.443)S(0.536)DPLDS(0.01)GT(0.01)R 51.927 0.044967 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)DTEENVK ddPTM_A549_PD325901_60min_R1 1 SSDTEENVK 9 0 H0YBT0;A0A087WUS5;P01106;P01106-2;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 S(0.184)S(0.787)DT(0.028)EENVK 54.198 0.020267 6601600.0 1586.7 1395.6 1922.5 1633.3 1822.1 1706.6 1966.9 1766.2 1918.4 1708.1 2109.6 True False 1747.780615933197 1513.2121098586263 2052.972410931648 1734.1852315065653 1694.1219819037524 1692.7020154214256 2041.7514558289781 1730.971755442903 1837.7763194157048 1600.250274493831 1850.1325738562211 0.944678581757148 0.817893880277264 1.1096352985411466 0.9373302519029826 0.9156759930844866 0.9149084986344174 1.1035703520279991 0.9355933622827083 0.9933214221428672 0.8649381655707181 1.0 10.853412937453472 SS(ph)EDEEMK ddPTM_A549_MK2206_60min_R1 1 SSEDEEMK 8 0 Q13129 Q13129 RLF Zinc finger protein Rlf 1 S(0.027)S(0.973)EDEEMK 81.97200000000001 0.0036229999999999995 23396000.0 6460.6 6707.9 6301.1 5274.4 3171.2 989.46 748.97 1148.4 1479.4 7592.4 7245.1 True False 7550.991333495069 7049.303458242569 7194.690728930606 6566.6282367768135 2704.7206808632386 1094.1640004496085 885.0481541752894 1311.1892168274999 1144.3182621163496 5877.271566849191 5445.941715412377 1.3865354658727365 1.2944140474901837 1.321110490141522 1.205783789090658 0.496648848299037 0.20091364499055356 0.16251517192527865 0.24076446009635896 0.2101231195475069 1.0792020689858142 1.0 12.410965826842641 -6.721392125108219 4.770429023019661 0.5123156647489473 1.3166268612002217 0.641471275334236 0.29427728815754745 0.12230675792311889 6.268939922535832 0.05127185880411258 0.10683476164877123 1.8993625683039425e-07 6.721392125108219 0.8043111964512744 SS(ph)EDEEMK ddPTM_A549_PD325901_60min_R1 2 SSEDEEMK 8 0 Q13129 Q13129 RLF Zinc finger protein Rlf 1 S(0.002)S(0.998)EDEEMK;S(0.002)S(0.998)EDEEMK 101.9 0.0022600000000000003 90747000.0 12217.699999999999 11843.7 12802.0 12349.0 13988.199999999999 10486.9 12650.1 11475.9 12605.3 12177.7 13290.7 True False 13458.031909804638 12841.810164468767 13670.820704679829 13111.769683386128 13005.717088670246 10401.498163320612 13131.506477900324 11247.004171830606 12075.543077111546 11408.797943740718 11656.0281566889 1.1545984385840424 1.1017312236929864 1.1728541249992368 1.1248917304529535 1.1157932113613518 0.8923707135480479 1.1265849997423616 0.9649088026075526 1.0359912411657914 0.9787894976209106 1.0 13.508788647090798 -7.02829786482988 24.746636565410135 1.0139818656330297 1.136093571355592 0.5812366631567623 0.056242439632370245 326.3177302709813 285366.1781672825 0.007185355199281331 0.01246360904745696 9.369191919411265e-08 7.02829786482988 0.12211170572256225 SS(ph)EGSLGGQNSGIGGR ddPTM_A549_MK2206_60min_R1 2 SSEGSLGGQNSGIGGR 16 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 S(0.036)S(0.964)EGSLGGQNSGIGGR;S(0.136)S(0.864)EGSLGGQNSGIGGR 158.65 2.5331000000000003e-20 10445600.0 4548.5 4859.0 3678.7 4480.5 5245.4 3850.3999999999996 3687.3 3750.8999999999996 6117.6 6413.1 6969.6 True False 5316.175599851766 5106.302345532974 4200.394976197334 5578.222701137291 4473.808608539363 4257.846772311334 4357.23468081571 4282.601561649486 4731.973367799767 4964.3762559086135 5238.855968825569 1.0147588770308433 0.9746979829028759 0.8017771439398754 1.0647787865005574 0.8539667124199042 0.8127436214410462 0.8317149214912471 0.8174688495224172 0.9032455551284352 0.9476069366002273 1.0 12.35503608339029 -4.183032596292827 15.785714492894911 0.925460127886413 0.9110884993333445 0.0 0.09040945356852881 0.0 0.0 0.012384055270072188 0.0 6.560960206838461e-05 4.183032596292827 -0.014371628553068505 SS(ph)FSITR ddPTM_A549_PD325901_60min_R1 2 SSFSITR 7 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.206)S(0.792)FS(0.001)ITR;S(0.227)S(0.77)FS(0.003)IT(0.001)R 76.1 0.017833 12040800.0 3561.6 2744.5 2376.4 2665.1000000000004 3222.5 2788.1000000000004 3145.1 2844.9 3416.8 3322.0 3704.1000000000004 True False 3923.1710100886567 2975.788646823589 2537.67679445408 2829.7171741187462 2996.162717021481 2765.3946379916083 3264.7885015647576 2788.156237719124 3273.2037782420643 3112.2483530639347 3248.519182224515 1.2076798042491947 0.9160446590885862 0.7811795627804587 0.871079102627006 0.9223164614252868 0.851278531191534 1.0050082263417948 0.8582852928729993 1.0075987225664604 0.9580514008024834 1.0 11.665566508860875 -8.79120350111703 24.229617199185423 1.003588322096522 0.9195173773995939 0.05623047805378789 0.10546790531559264 226.0037006207435 183978.15688369342 0.017499255156291197 0.018630884217457244 1.617322017511964e-09 8.79120350111703 -0.08407094469692811 SS(ph)FSQHAR ddPTM_A549_MK2206_60min_R1 1 SSFSQHAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.366)S(0.581)FS(0.053)QHAR 91.087 0.0011119 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)FSQHAR ddPTM_A549_PD325901_60min_R1 2 SSFSQHAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.412)S(0.587)FS(0.001)QHAR;S(0.302)S(0.396)FS(0.302)QHAR 80.688 0.0011872 13458300.0 2144.6 2045.19 2236.53 2185.16 2197.22 1919.9099999999999 2031.2 2285.8999999999996 2662.8 2381.8 2863.8 True False 2362.3182132289226 2217.5453388949286 2388.314375147445 2320.132370341569 2042.894847197499 1904.2748895041311 2108.4984275152897 2240.3059312461414 2550.8917761364364 2231.4127415194694 2511.5707551239325 0.9405740246057113 0.8829316611410792 0.9509245838585163 0.9237774271770748 0.8133933089600309 0.7582007736071785 0.8395138473458004 0.8919939550481008 1.015655947949021 0.8884530674547376 1.0 11.294374203362272 -8.711721382272168 4.98389406731115 1.0075440359467775 0.8713162072143132 0.238550894377758 0.06441090353331251 0.11368095150401619 6.082113249355349 0.0100298332495812 0.011246179827173125 1.9421314350068628e-09 8.711721382272168 -0.1362278287324643 SS(ph)FSSDPDEK ddPTM_A549_MK2206_60min_R1 1 SSFSSDPDEK 10 0 P46013 P46013 MKI67 Antigen KI-67 1 S(0.123)S(0.874)FS(0.003)SDPDEK 199.19 2.287e-19 31260000.0 6069.9 8226.0 7043.3 8078.2 10316.0 10943.0 9517.3 11655.0 12573.0 13207.0 13004.0 True False 7094.350725192968 8644.668263913203 8042.145849308362 10057.359362644183 8798.530065522566 12100.980996624492 11246.470216073381 13307.131941940534 9725.235574955292 10223.529527340146 9774.747907858075 0.725783497648027 0.8843878476869586 0.8227471363065183 1.0289124034144055 0.9001285913930617 1.2379839470741052 1.1505637098867958 1.3613785304112773 0.9949346690708024 1.0459123471738119 1.0 13.2548437802511 -6.220453570695523 1.318308414658234 1.0518563279531676 0.7816792141086322 0.47230592500557267 0.12784467400495153 0.4315720745341921 1.3411321092516166 0.020960985693097796 0.09592674737991354 6.019306103111004e-07 6.220453570695523 -0.27017711384453547 SS(ph)FSSDPDEK ddPTM_A549_PD325901_60min_R1 1 SSFSSDPDEK 10 0 P46013 P46013 MKI67 Antigen KI-67 1 S(0.118)S(0.852)FS(0.007)S(0.022)DPDEK 113.61 0.00010309 36054000.0 6248.4 6347.8 4864.5 5976.2 7018.3 6327.8 5629.6 6353.8 6209.2 6791.9 6660.8 True False 6882.732968171038 6882.75138360604 5194.6342226148245 6345.336301065044 6525.35881982059 6276.268494775406 5843.837508635321 6227.068474540325 5948.248917074642 6363.058274887097 5841.5638262900675 1.1782346599030844 1.1782378123868285 0.8892540383169787 1.0862393170314666 1.1170568385220907 1.074415803954575 1.0003892249426465 1.065993398294355 1.0182631045310908 1.0892730892111515 1.0 12.51213892472913 -2.000018777116282 0.6853269041117683 1.0209962698351664 21.46018017702632 0.21866645680250485 0.0709786303807532 192.40226621540307 1.003897547887073 0.010623655191714751 6020.400453040212 0.009999567650266184 2.000018777116282 20.439183907191154 SS(ph)FSSDPDESEGIPLK ddPTM_A549_MK2206_60min_R1 1 SSFSSDPDESEGIPLK 16 0 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.125)S(0.795)FS(0.079)SDPDESEGIPLK 218.16 1.0211999999999998e-98 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)FSSDPDESEGIPLKR ddPTM_A549_MK2206_60min_R1 1 SSFSSDPDESEGIPLKR 17 1 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.261)S(0.729)FS(0.007)S(0.003)DPDESEGIPLKR 231.21 2.1594999999999998e-64 41273000.0 5032.4 5425.5 5086.6 6281.1 9559.2 9219.6 7335.4 8425.6 12005.0 12368.0 13126.0 True False 5881.746089632635 5701.634775815836 5807.956366630973 7819.969781969294 8153.054342995668 10195.211952524827 8668.147229044444 9619.954602317817 9285.88666804567 9574.060210050953 9866.451940829367 0.5961358880483453 0.5778809657219656 0.5886570371458942 0.7925817536908767 0.8263410587606154 1.0333209966122658 0.8785475549902496 0.9750166179301504 0.9411576444840114 0.9703650580237017 1.0 13.268315657323916 -6.59205816179765 1.3360558463675758 0.9683369239695238 0.570871491910252 0.9234416126598866 0.045950357371212475 0.07665133574130625 0.26653028347687097 0.00676818145043655 0.021210742739457646 2.558243257660663e-07 6.59205816179765 -0.39746543205927176 SS(ph)FSSDPDESEGIPLKR ddPTM_A549_PD325901_60min_R1 1 SSFSSDPDESEGIPLKR 17 1 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.419)S(0.58)FS(0.001)SDPDESEGIPLKR 178.1 9.2537e-31 63997000.0 9602.4 10531.0 10740.0 10549.0 12407.0 10478.0 10592.0 11677.0 11187.0 12595.0 12725.0 True False 10577.228579086739 11418.484328547709 11468.880984866526 11200.587771482735 11535.575121826385 10392.670641969833 10995.084356164796 11444.093074570717 10716.849293840427 11799.749550523853 11159.90567042114 0.947788349781597 1.0231703265030205 1.0276861940925104 1.0036453803699632 1.0336624217533434 0.9312507604356521 0.9852309401957405 1.025465036402844 0.9602992722640107 1.057334165628173 1.0 13.446037212326695 -7.199695610886223 24.999910643913182 0.9817063648114444 1.0090199695836124 0.0 0.03804258274750834 344.58557626478097 139521.49783420726 0.004486059104417807 0.007770082187183607 6.313997260326256e-08 7.199695610886223 0.027313604772168043 SS(ph)GDGEELER ddPTM_A549_MK2206_60min_R1 1 SSGDGEELER 10 0 Q9BS91 Q9BS91 SLC35A5 Probable UDP-sugar transporter protein SLC35A5 1 S(0.182)S(0.818)GDGEELER 68.355 0.0041342 9527000.0 131.97 256.33 309.69 236.92 462.86 248.33 177.51 209.98 254.42 283.65 344.16 True False 154.2433096432752 269.37610212604807 353.60869877362984 294.9654106357427 394.7739071469342 274.60811577188684 209.76126927334278 239.74530803678024 196.79427622525446 219.57326799651946 258.695573667213 0.5962348232586863 1.041286088924639 1.3668911831808666 1.1402027736863691 1.5260172470317288 1.0615106856259697 0.8108421272919826 0.926746850122722 0.7607176011384384 0.8487708733624464 1.0 8.015111559209082 -7.589456297638461 6.042467628907394 0.883606166301789 1.1564905318893939 0.24219160158506048 0.2227424531273081 0.22521477686681812 15.229327194244146 0.03493580145013928 0.05210892750988122 2.5736157302453618e-08 7.589456297638461 0.27288436558760487 SS(ph)GDGEELER ddPTM_A549_PD325901_60min_R1 1 SSGDGEELER 10 0 Q9BS91 Q9BS91 SLC35A5 Probable UDP-sugar transporter protein SLC35A5 1 S(0.097)S(0.903)GDGEELER 79.693 0.001242 9609900.0 204.31 291.51 305.24 475.34 271.98 286.71 381.73 187.97 169.94 402.24 245.87 True False 225.0514007949274 316.07657075443404 325.9554219572309 504.7006722245339 252.8770630800628 284.37512881839757 396.2569440406713 184.2207908903877 162.79801278226896 376.84249775329204 215.6295486983453 1.0436946241990368 1.4658314348030705 1.5116454304378564 2.340591422980643 1.1727384516944144 1.3188133562168876 1.8376745971630006 0.8543392684464741 0.7549893498595364 1.7476384847443862 1.0 7.752411080479053 -8.277545268244705 24.553965684932045 0.8788206236376515 1.5339456893432737 0.1375138526211358 0.4211053277749657 417.6364835623198 636699.2850832714 0.05376985719746257 0.06511293720951675 5.27782191073152e-09 8.277545268244705 0.6551250657056222 SS(ph)GDPEQIKEDSLSEESADAR ddPTM_A549_MK2206_60min_R1 1 SSGDPEQIKEDSLSEESADAR 21 1 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 S(0.462)S(0.538)GDPEQIKEDSLSEESADAR 96.01899999999999 3.2125e-07 6054500.0 1246.3 1285.9 1199.9 977.65 1983.0 1366.8 944.74 1473.9 2251.3 1804.6 1857.0 True False 1456.6449708904604 1351.346817477023 1370.0638627610795 1217.1742938883756 1691.3033268642166 1511.4338687915886 1116.3870290873633 1682.829838629442 1741.384144587358 1396.9396066508675 1395.8556494072952 1.0435498624151984 0.968113585420404 0.9815225975141717 0.871991523195976 1.2116606237775185 1.082800982632674 0.799786875929041 1.2055901620944838 1.2475388449563392 1.0007765539681932 1.0 10.446934039496167 SS(ph)GFISELPSEEGK ddPTM_A549_MK2206_60min_R1 1 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.263)S(0.737)GFISELPSEEGK 212.69 2.4334e-38 17356000.0 4420.7 4915.0 4432.5 4280.1 5229.1 4300.3 4205.9 4250.1 5772.7 5166.7 5874.1 True False 5166.806084261779 5165.152506337632 5061.095151002985 5328.724692140989 4459.906316946884 4755.3548916918835 4970.057587948581 4852.56469038537 4465.192667107644 3999.5388815710107 4415.398853087447 1.1701787893179603 1.1698042868145249 1.146237365954842 1.2068501327835657 1.0100800551298588 1.0769932796369515 1.125619169030062 1.099009365143137 1.0112773082742863 0.9058159895961272 1.0 12.108328050368414 -7.332632878258477 0.3301866843636049 0.9891253390987577 1.21028166595379 0.6454199923798772 0.052442597316276755 0.9054078854897128 0.18391931753554494 0.022203003657535466 0.07194575082554218 4.64908109492477e-08 7.332632878258477 0.2211563268550324 SS(ph)GFISELPSEEGK ddPTM_A549_PD325901_60min_R1 2 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.207)S(0.793)GFISELPSEEGK;S(0.133)S(0.867)GFISELPSEEGK 302.85 1.6136999999999997e-135 68931000.0 11710.7 11864.2 11913.8 11817.2 12654.5 11129.8 12977.0 13419.3 13531.400000000001 11506.9 13034.3 True False 12899.561643038302 12864.037771413528 12722.342111499342 12547.121605191564 11765.69157565502 11039.162598873434 13470.846836286868 13151.641534262802 12962.722314711047 10780.352370220166 11431.163731235385 1.128455680132597 1.1253480462590917 1.1129524876575638 1.0976241702239686 1.0292645484121223 0.9657076793248253 1.178431798634648 1.1505076686397424 1.133980985618351 0.9430669198415125 1.0 13.480684661826249 -10.85626250136828 1.128428020045342 1.000558451364197 1.10290764419248 0.40009828041199036 0.05914500717908933 0.5132018469157522 1.1702616503317642 0.04049248678280489 0.010086720353129637 1.3923149891934052e-11 10.85626250136828 0.10234919282828314 SS(ph)GFISELPSEEGKK ddPTM_A549_PD325901_60min_R1 1 SSGFISELPSEEGKK 15 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.249)S(0.751)GFISELPSEEGKK 75.743 0.00071617 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)GGREDLESSGLQR ddPTM_A549_MK2206_60min_R1 1 SSGGREDLESSGLQR 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 S(0.199)S(0.801)GGREDLESSGLQR 83.37 0.00019199 16812000.0 527.03 598.16 548.88 652.06 858.03 938.07 611.53 801.44 885.22 988.41 1152.3 True False 615.9797793536061 628.6037890520687 626.7194374467047 811.8147292720856 731.8149236254678 1037.3359447595296 722.6370852274646 915.0465743070636 684.7190834058636 765.1274945194418 866.1521081378701 0.7111681349802329 0.7257429533982159 0.7235674098791738 0.9372657777366568 0.8449034722074255 1.1976371528895606 0.8343073675373871 1.0564502074287057 0.7905298353171856 0.8833638887797435 1.0 9.758476593925604 -6.25860478135114 23.38770264388318 0.9245451286901512 0.7207178174381648 0.444392747026771 0.10958585979723943 81.41499723766675 671723.0383467802 0.01616175637037964 0.040734182952690226 5.513091730855546e-07 6.25860478135114 -0.2038273112519864 SS(ph)GPYGGGGQYFAK ddPTM_A549_PD325901_60min_R1 1 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;Q32P51 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 1 S(0.024)S(0.975)GPYGGGGQYFAK 107.46 1.7228e-05 25809000.0 5007.5 4538.1 4973.7 5515.4 5548.0 5741.4 4592.3 4649.5 4744.2 4899.2 5854.3 True False 5515.857713673338 4920.541613463339 5311.245191287773 5856.073731617773 5158.327619560955 5694.643941955101 4767.062489502982 4556.762075037813 4544.817772399911 4589.863675897294 5134.258213465342 1.074324173881087 0.9583743958491413 1.0344717718634129 1.1405880826677872 1.0046880006993975 1.1091463859414132 0.9284812510988762 0.8875210177561851 0.8851946247036159 0.8939682199581833 1.0 12.325940138798687 -7.778030867858467 24.83518045854208 0.9379325113802496 1.0501318493451444 0.5816963887973545 0.0557407149217047 160.33325002400116 239996.23281766 0.009784466784845017 0.013540156213882179 1.667128715714843e-08 7.778030867858467 0.11219933796489479 SS(ph)GSETEQVVDFSDRETK ddPTM_A549_MK2206_60min_R1 1 SSGSETEQVVDFSDRETK 18 1 O95251-4;O95251 O95251-4 KAT7 Histone acetyltransferase KAT7 1 S(0.146)S(0.851)GS(0.003)ETEQVVDFSDRETK 144.22 2.7518000000000004e-17 10704000.0 1649.4 2125.3 1851.9 1409.6 2036.4 2125.4 2141.0 2068.9 2893.9 2631.4 2924.6 True False 1927.778396041662 2233.46869210974 2114.5272668116013 1754.952063279348 1736.848257602768 2350.308417273663 2529.991986447113 2362.1729107405195 2238.4362706086945 2036.96491241333 2198.3411051462426 0.8769241459065645 1.015979133939344 0.9618740521484878 0.7983074415390151 0.7900722292536243 1.0691281765926453 1.1508641586715032 1.07452519775514 1.0182388280729457 0.9265918321978621 1.0 11.102199543798095 -7.2799717691746695 24.787100691807414 1.029942519647842 0.8947573057505532 0.4694425743443472 0.07956645873900048 574.5886440509615 768511.6849766456 0.012162052480424006 0.019463797826785676 5.24841575878478e-08 7.2799717691746695 -0.13518521389728877 SS(ph)GSETEQVVDFSDRETK ddPTM_A549_PD325901_60min_R1 1 SSGSETEQVVDFSDRETK 18 1 O95251-4;O95251 O95251-4 KAT7 Histone acetyltransferase KAT7 1 S(0.144)S(0.494)GS(0.356)ET(0.007)EQVVDFSDRETK 168.4 9.6892e-31 16842000.0 4445.0 5018.0 5131.5 5769.9 4999.8 5637.3 5344.0 5756.3 5903.4 6057.6 6618.6 True False 4896.253127763951 5440.88447067253 5479.754448216257 6126.29361860634 4648.631296373622 5591.391697840856 5547.3688443490055 5641.486080770011 5655.300627626496 5675.122102203521 5804.554158762225 0.8435192426231127 0.9373475243502174 0.9440439865556826 1.0554287979824317 0.8008593199800389 0.9632766867030449 0.955692494655255 0.971906872856711 0.9742868225442562 0.9777016368495208 1.0 12.50296954423452 -2.0000000013514736 0.12332433112853947 1.0198681639511789 0.6244449491946633 0.1932173268014965 0.06017862933755462 90.42913502158385 0.7343694124745463 0.18792586052974047 6.207837472556443 0.00999999996888117 2.0000000013514736 -0.39542321475651554 SS(ph)GSNQPFPIKPLSESK ddPTM_A549_PD325901_60min_R1 2 SSGSNQPFPIKPLSESK 17 1 B4DRN8;Q5W0Z9 B4DRN8 ZDHHC20 Palmitoyltransferase;Probable palmitoyltransferase ZDHHC20 1 S(0.205)S(0.784)GS(0.011)NQPFPIKPLSESK;S(0.134)S(0.687)GS(0.18)NQPFPIKPLSESK 175.86 1.1129e-30 25812000.0 10818.9 11288.8 13209.0 12135.3 14451.5 14626.5 14093.1 15710.900000000001 14518.5 14675.2 15685.5 True False 11917.226763546763 12240.146794047041 14105.44217216965 12884.869919734043 13436.476494968474 14507.38663340062 14629.420632540223 15397.533774537385 13908.33793444375 13748.605367514703 13756.282938576876 0.8663115477311949 0.8897859144581768 1.0253818008216176 0.9366534533540946 0.9767519725323789 1.0546007739283565 1.0634719202754108 1.1193091799062909 1.0110534943593277 0.9994418862205398 1.0 13.747803074115323 -5.344363680703413 0.8001519069429003 1.019824831071113 0.7731393947042743 0.5815398194083679 0.04627355450638796 1.3327723046444142 0.6557373413445892 0.007731711625531463 0.28347587519350004 4.525184796112103e-06 5.344363680703413 -0.24668543636683882 SS(ph)GSPYGGGYGSGGGSGGYGSR ddPTM_A549_MK2206_60min_R1 2 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 S(0.144)S(0.483)GS(0.37)PY(0.002)GGGYGSGGGSGGYGSR;S(0.101)S(0.714)GS(0.185)PYGGGYGSGGGSGGYGSR 127.5 1.266e-21 14415500.0 3194.5 3873.8 3142.0 3044.1 4911.0 4001.8 3158.2 3855.5 5121.700000000001 5236.5 5814.9 True False 3733.6535019735015 4070.9598736624084 3587.582845899914 3789.9046366548423 4188.598405562359 4425.267819820151 3732.004059597045 4402.028931973548 3961.643127674261 4053.5710130928014 4370.899846924327 0.8542070586679681 0.9313779807897046 0.8207881606860404 0.8670765218566346 0.9582920113142726 1.0124386224347102 0.8538296896057104 1.0071218939210254 0.9063678570585304 0.927399655689933 1.0 12.093714605819073 -10.363234961485238 0.014200788886617164 1.9206124230375876 7.113475006357431e-07 0.21214554307564504 0.05720547936662587 1210.7659563333382 4.645891595334821 332.2246231704269 296.36463384743166 4.332764042797057e-11 10.363234961485238 -1.920611711690087 SS(ph)IDSQASLSGPLSGGAPGAGAR ddPTM_A549_MK2206_60min_R1 1 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.173)S(0.823)IDS(0.004)QASLSGPLSGGAPGAGAR 218.72 6.155399999999999e-74 6947700.0 1604.3 2074.7 1693.2 1603.8 2493.8 1127.6 1281.1 1766.9 2435.2 2163.0 2675.4 True False 1875.0666186307997 2180.2933682398143 1933.321220457588 1996.7310719973166 2126.9653235168844 1246.9218835596982 1513.859287173001 2017.3634859043104 1883.6310882153132 1674.3767977312577 2011.024342716357 0.9323937949443641 1.0841705502653538 0.961361421337241 0.9928925421659819 1.0576526988449688 0.6200431576454414 0.7527801901831686 1.0031521961486507 0.9366525547229481 0.8325989706666711 1.0 10.973714829708443 SS(ph)IDSQASLSGPLSGGAPGAGAR ddPTM_A549_PD325901_60min_R1 2 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.172)S(0.828)IDSQASLSGPLSGGAPGAGAR;S(0.176)S(0.824)IDS(0.001)QASLSGPLSGGAPGAGAR 251.12 4.6459999999999993e-110 15778800.0 4109.3 4360.9 4485.799999999999 3727.0 4506.200000000001 3838.2999999999997 4408.2 4689.5 4691.4 5227.2 5392.0 True False 4526.473110893229 4728.408347579879 4790.233363306728 3957.208325368866 4189.700057546069 3807.0421573843073 4575.956463259596 4595.964243658421 4494.236772782962 4897.153699920468 4728.818182704186 0.9572102237825423 0.9999133324419606 1.012987426927762 0.8368281825345898 0.8859930527399086 0.8050726440083262 0.9676744350197926 0.9719054668814117 0.9503932270478883 1.0355977985856963 1.0 12.207263957658133 -9.479786511022278 0.7144254746019336 0.9924345686484277 0.9255250304342834 0.20891553248888428 0.06287804114321917 0.8934219449480114 0.9919072366184292 0.024576211536365435 0.015520094218958029 3.3129393778784755e-10 9.479786511022278 -0.06690953821414436 SS(ph)ISGSLPSSGSLQAVSSR ddPTM_A549_PD325901_60min_R1 2 SSISGSLPSSGSLQAVSSR 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.223)S(0.727)IS(0.05)GSLPSSGSLQAVSSR;S(0.221)S(0.762)IS(0.016)GS(0.001)LPSSGSLQAVSSR 138.28 3.7958e-17 11575300.0 5158.4 5038.5 4927.6 5011.0 5659.200000000001 5401.4 5371.3 5163.4 5989.8 5366.3 5805.299999999999 True False 5682.07697058663 5463.112077617291 5262.016568065949 5320.518089193286 5261.717315180129 5357.412789228462 5575.707760788141 5060.411936391062 5738.069536090592 5027.470902181513 5091.28490282875 1.1160398757943464 1.0730320895186893 1.0335341016061268 1.0450246235949538 1.0334753241282344 1.0522712618678733 1.0951474661514704 0.9939361149440813 1.1270376035924614 0.9874660322757068 1.0 12.31381408418596 -5.347804171374545 3.3013272500238275 1.054417015816773 1.1192961267253316 0.17141280139020487 0.04161261916709096 0.4417428953436574 7.711900174510004 0.006458555115596452 0.0629223592375397 4.489477802741898e-06 5.347804171374545 0.06487911090855869 SS(ph)ITEPEGPNGPNIQK ddPTM_A549_MK2206_60min_R1 1 SSITEPEGPNGPNIQK 16 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.181)S(0.81)IT(0.009)EPEGPNGPNIQK 279.24 6.5735e-107 7431800.0 2075.4 2400.2 1976.7 1845.2 2421.9 1810.7 2415.3 2609.1 2851.9 2595.6 3425.6 True False 2425.6767813416186 2522.359927916904 2257.0257834151375 2297.2740828341753 2065.64171827153 2002.3070721546158 2854.1287458504025 2978.9479150336397 2205.949203548475 2009.25215727751 2574.9289782496635 0.9420363830735632 0.9795842717306735 0.8765390433989274 0.8921698820585617 0.8022130846015305 0.7776164271201399 1.108430084852487 1.1569048856091606 0.856702931297155 0.7803136219482533 1.0 11.330316925058892 -7.7415253022174255 24.99981606840611 0.9630355526120449 0.8800447542337887 0.16589618461782263 0.11088280985173876 427.34284480996496 536478.4275109211 0.017081138642222618 0.02531696256433797 1.813321027787828e-08 7.7415253022174255 -0.08299079837825618 SS(ph)ITEPEGPNGPNIQK ddPTM_A549_PD325901_60min_R1 2 SSITEPEGPNGPNIQK 16 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.238)S(0.752)IT(0.009)EPEGPNGPNIQK;S(0.1)S(0.898)IT(0.002)EPEGPNGPNIQK 334.79 9.168199999999997e-187 25633000.0 7845.1 9031.1 8021.0 9212.2 10110.1 8986.6 8488.0 9580.599999999999 10889.3 10359.900000000001 9818.3 True False 8641.528776742622 9792.182491648204 8565.35329419129 9781.216671575812 9400.001453951556 8913.41610909773 8811.015484811825 9389.507417164697 10431.660589560795 9705.774145968408 8610.711343331699 1.0035789648708626 1.1372094709958498 0.9947323691003143 1.135935961800714 1.0916637521743309 1.0351544435408873 1.0232622060470353 1.090445033259199 1.211474891402471 1.1271744875624876 1.0 13.071916710333658 -8.508405134699712 24.20054953238359 1.102552442656433 1.0633219522074022 0.11070112026351575 0.06409844213965278 1244.6744361007627 2081157.5520826431 0.014026112250693919 0.016641495993882746 3.1016648280201585e-09 8.508405134699712 -0.03923049044903082 SS(ph)LAELMAR ddPTM_A549_MK2206_60min_R1 2 SSLAELMAR 9 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.159)S(0.841)LAELMAR;S(0.258)S(0.742)LAELMAR 94.69200000000001 0.00094091 6673200.0 789.14 986.25 784.8499999999999 607.9300000000001 962.01 1067.8600000000001 791.75 901.04 1527.9099999999999 1395.47 1155.35 True False 922.327539379361 1036.445912385655 896.1535317010017 756.8728772910147 820.4996033669414 1180.860236411901 935.6007264219996 1028.765179319271 1181.8408245709013 1080.2323578039939 868.4447089621528 1.0620452054818799 1.1934506614983864 1.0319062600680275 0.8715268450371773 0.9447919883667564 1.35974141384672 1.077329065128513 1.1846064219202987 1.3608705452109633 1.243870043373217 1.0 9.762290189953523 -7.23439671429546 24.970646632719948 1.179638270036374 1.0226692622319369 0.3393643133166777 0.12500210032727277 986.1203780472957 910564.1883172431 0.02334365897167131 0.04042567777987492 5.829123889408524e-08 7.23439671429546 -0.156969007804437 SS(ph)LETLEDIEENAPLR ddPTM_A549_MK2206_60min_R1 1 SSLETLEDIEENAPLR 16 0 Q8TDN4;Q8TDN4-2;V9GYB4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.093)S(0.907)LETLEDIEENAPLR 46.3 0.029997000000000003 479540.0 336.07 591.56 337.84 189.86 639.11 424.36 352.45 379.02 577.8 750.1 493.44 True False 392.79039987736263 621.6678772429485 385.7507920620074 236.37570852313925 545.0977656238977 469.2654935326298 416.4856028133043 432.7472457000687 446.92922255700034 580.6518890329253 370.9052297488074 1.0590047493894243 1.6760828033187025 1.040025217016363 0.6372940836752903 1.4696416278440203 1.26518974631454 1.1228895399921048 1.166732661044287 1.2049687810001481 1.5654993309912808 1.0 8.534906799701055 -10.77360067923928 0.7205008382988027 0.9811607970820861 1.1879390205382352 0.0 0.29917994283140237 2.096535275418884 1.6415143902011584 0.2655796082793852 0.047452303795447626 1.684221940947018e-11 10.77360067923928 0.20677822345614905 SS(ph)LETLEDIEENAPLR ddPTM_A549_PD325901_60min_R1 1 SSLETLEDIEENAPLR 16 0 Q8TDN4;Q8TDN4-2;V9GYB4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.137)S(0.863)LETLEDIEENAPLR 110.38 4.7498999999999994e-07 1215400.0 1059.6 1326.1 1240.9 903.29 1199.0 1019.5 1166.2 1321.2 931.53 1296.2 1498.5 True False 1167.1698119637076 1437.855100948355 1325.1149361378853 959.0841717795657 1114.7863763254475 1011.1975300141474 1210.5803791691271 1294.8476295386515 892.3810335828355 1214.3577107891235 1314.1939997741517 0.888125963262874 1.0940965346025433 1.0083099879969093 0.7297888834862944 0.8482662198404702 0.7694431188910654 0.9211580477290028 0.9852789084116766 0.6790329538380132 0.9240323049700536 1.0 10.35996254498985 -6.225522005539375 22.904869684646783 0.8483668774386302 1.0065696078828974 0.2525232709575975 0.10592360280432125 257.218338130765 164029.23081022437 0.0180318456202945 0.04770435613672363 5.949466102724465e-07 6.225522005539375 0.15820273044426725 SS(ph)LETLEDIEENAPLRR ddPTM_A549_MK2206_60min_R1 1 SSLETLEDIEENAPLRR 17 1 Q8TDN4;Q8TDN4-2;V9GYB4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.167)S(0.833)LETLEDIEENAPLRR 129.46 2.1467e-12 6164100.0 385.6 766.26 574.01 596.23 1034.4 695.58 730.02 739.12 1243.1 923.38 1062.5 True False 450.67985298512497 805.2593610389167 655.4132493236823 742.3063767657821 882.2411302613939 769.1858139113651 862.6551844680625 843.892523460068 961.5398348227883 714.7878166847385 798.6519264917878 0.5643007147867427 1.008273234343969 0.8206494313520217 0.9294491782252214 1.1046628712670683 0.963105188126375 1.080139114241444 1.0566462002627441 1.203953565912641 0.8949929161563079 1.0 9.641423065473171 -4.595738963033006 0.5128282889844742 1.0911011482319193 1.635915428318368e-17 0.5261796496370303 0.11155614070317246 3.5451234022461833 0.3817558013673129 0.019489964097249266 2.7082808776383853 2.536652852507268e-05 4.595738963033006 -1.0911011482319193 SS(ph)LETLEDIEENAPLRR ddPTM_A549_PD325901_60min_R1 1 SSLETLEDIEENAPLRR 17 1 Q8TDN4;Q8TDN4-2;V9GYB4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 S(0.185)S(0.815)LETLEDIEENAPLRR 142.88 1.3395999999999999e-16 14083000.0 774.27 604.86 498.65 611.86 714.23 548.57 1042.4 575.09 762.48 554.37 747.63 True False 852.8733204125523 655.833674956355 532.4913876260422 649.6532025651181 664.0649487597369 544.1026277978037 1082.0691024231674 563.6193788006224 730.4356171956244 519.366983590624 655.6762496170496 1.3007537194014216 1.0002400961440914 0.8121254779886353 0.9908139923392844 1.012793965234499 0.8298342789075998 1.6503100471538419 0.8596001138211222 1.1140187213159518 0.7921088858929425 1.0 9.35683982723195 SS(ph)LGSLQT(ph)PEAVTTR ddPTM_A549_MK2206_60min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.461)S(0.537)LGS(0.158)LQT(0.577)PEAVT(0.124)T(0.142)R 46.336999999999996 0.049111 2034000.0 1064.7 1222.9 727.72 823.95 1364.4 950.1 986.91 889.77 1637.7 1449.8 1412.0 True False 1244.3953305841865 1285.1403865717796 830.9216386436306 1025.8177869885212 1163.6985674097502 1050.6389513746626 1166.2187722300418 1015.8976223063435 1266.7635648695045 1122.2891730701697 1061.3614307824987 1.172451998436333 1.2108414243245091 0.7828828281719505 0.9665112724439472 1.0964206288820977 0.9898974288146773 1.0987951308634196 0.9571646310506717 1.1935270381321197 1.057405272624945 1.0 10.051700312831926 -8.744308500940564 24.99637041878118 1.0913877926498436 1.0323415158996487 0.0319657301059163 0.11831033892028213 684.8136226111163 999238.8251718325 0.021714982511672552 0.024591804861912307 1.8017374225985659e-09 8.744308500940564 -0.059046276750194915 SS(ph)LGSLQT(ph)PEAVTTR ddPTM_A549_PD325901_60min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.429)S(0.571)LGS(0.202)LQT(0.797)PEAVTTR 101.08 1.1072e-05 4389800.0 3006.5 2876.5 2765.0 3261.8 3042.3 2478.8 2303.5 3151.1 2895.2 3206.9 3342.2 True False 3311.7176667316808 3118.9127500776276 2952.649527295713 3463.273977914723 2828.6193433652284 2458.6134746435205 2391.1609530235673 3088.2488385098727 2773.524812329205 3004.4157867070217 2931.130587951397 1.129843098886386 1.0640647547052735 1.0073415150566034 1.1815488508600525 0.9650267221093636 0.8387935647595542 0.8157811060525894 1.0536032926012646 0.9462303807718289 1.0250023656594722 1.0 11.517241529179833 -6.866154327434765 9.405432737961746 0.9566534391735003 1.0869552277288168 0.44452182007866525 0.0783123459686049 0.23072251609583047 19.0118366660251 0.011362439869611902 0.02150546860766534 1.3609609762541663e-07 6.866154327434765 0.1303017885553165 SS(ph)LMDTADGVPVSSR ddPTM_A549_MK2206_60min_R1 1 SSLMDTADGVPVSSR 15 0 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 S(0.166)S(0.828)LMDT(0.004)ADGVPVS(0.001)S(0.001)R 50.155 0.023852 1475000.0 842.41 918.16 865.27 640.81 1045.3 832.93 842.76 1093.2 1268.0 1032.8 966.94 True False 984.5882130529028 964.8904222215591 987.9782969674799 797.8084787670545 891.5377547005365 921.070099745813 995.8785831378651 1248.164447784589 980.800024579918 799.4897626892484 726.8221118136186 1.3546481278563303 1.3275468736275724 1.3593123831940195 1.097666768525115 1.2266244246145839 1.2672565745798416 1.3701820114592793 1.717290142246883 1.349436139377427 1.0999799671673505 1.0 9.5054585005391 -10.526423326472441 1.0054304896907515 1.0138427796428666 1.3361587002901694 0.36872047791030993 0.14465719351737738 0.3984734433098678 0.7618977118489528 0.08234223361819681 0.027631000164857235 2.975614549288946e-11 10.526423326472441 0.32231592064730274 SS(ph)LS(ph)GDEEDELFK ddPTM_A549_PD325901_60min_R1 1 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 2 S(0.403)S(0.597)LS(1)GDEEDELFK 143.25 2.6356e-12 11347000.0 4340.9 4675.0 4825.1 5955.0 5681.6 4551.4 5386.5 6071.9 4602.4 5841.1 6165.5 True False 4781.584972398319 5068.978656913925 5152.560301683383 6322.8268252137395 5282.544016455933 4514.334907411859 5591.486205105902 5950.791191186598 4408.977133277127 5472.291949151635 5407.182586324677 0.8843024802771486 0.9374528372194968 0.9529103594013526 1.1693385093384532 0.9769494431011138 0.8348774681345287 1.0340849630725153 1.1005345383077618 0.8153926860964313 1.012041273211603 1.0 12.400661357918999 -8.76977516213635 24.99964209758566 0.9128243394947562 0.9858988490150533 0.013582276857362685 0.10121738033256067 356.7984311263614 1070062.0950864693 0.01894470578218693 0.0203318923541133 1.6991230749409537e-09 8.76977516213635 0.07307450952029715 SS(ph)LS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 SSLSPGR 7 0 F8W1J5;F8VVA2;Q9BUQ8 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 2 S(0.405)S(0.595)LS(1)PGR 51.113 0.058217 9568000.0 1037.4 991.83 925.34 847.67 1015.1 777.83 754.74 936.53 1201.9 1344.3 1652.9 True False 1212.4877580051057 1042.3099105515473 1056.5671262332996 1055.3491880533527 865.7801346948389 860.1394543182336 891.8664884871996 1069.2859955028366 929.6715690399084 1040.621696343102 1242.4393122807307 0.9758929438407391 0.8389221914092462 0.8503973721611982 0.8494170923455899 0.6968389732497573 0.6922989685019593 0.7178350521201805 0.8606343866727473 0.7482631625148125 0.837563401332533 1.0 10.27895966883604 -10.82789367476253 0.9864176865407713 1.0043726140788463 0.7967796673796527 0.09984011197285325 0.09386205024640905 0.4388500239020509 0.731282708131779 0.06601378324347712 0.014944116082932956 1.4862994779061106e-11 10.82789367476253 -0.2075929466991936 SS(ph)LS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 SSLSPGR 7 0 F8W1J5;F8VVA2;Q9BUQ8 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 2 S(0.427)S(0.573)LS(0.999)PGR 56.258 0.043814 16260000.0 1473.8 1164.5 1030.2 995.14 1269.0 1009.8 1119.7 1017.0 1134.3 1198.6 1510.5 True False 1623.4190910457837 1262.6365018131055 1100.115567095856 1056.6075376730814 1179.869817812338 1001.5765235981223 1162.3107962233494 996.715137178934 1086.629315634504 1122.9201914456442 1324.7180758484178 1.2254827050699542 0.9531360104710943 0.8304525975395068 0.7976093607663468 0.8906572948034157 0.7560676810095318 0.8774023827514738 0.7523979293032491 0.8202721284214157 0.8476672976070536 1.0 10.371469645204215 -5.2929558125331 3.006263048108469 0.8760327919419162 1.2697052203200772 0.6863047720604594 0.0724901257961416 0.19966104155263992 2.7240205939794837 0.012862094250455543 0.18014417659761808 5.093826957681359e-06 5.2929558125331 0.39367242837816097 SS(ph)LSGDEEDELFK ddPTM_A549_MK2206_60min_R1 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.144)S(0.856)LSGDEEDELFK;S(0.187)S(0.813)LSGDEEDELFK 156.08 2.3226e-18 20544300.0 2977.8 2878.8 2696.14 2787.3999999999996 3789.3 2821.7 3336.6 3075.9 3995.3 3830.9 3736.3999999999996 True False 3480.3798397798373 3025.318623651025 3078.4931935533405 3470.31312513114 3231.8989896553553 3120.290421107131 3942.817030350042 3511.9182445486817 3090.37092918308 2965.4970293244005 2808.5487606060383 1.2392093342288382 1.0771821611522285 1.096115273743388 1.2356250223629033 1.1507362930590406 1.110997417909819 1.403862765586896 1.2504387653183804 1.1003444100846693 1.0558823371414408 1.0 11.455609135139179 -9.227588198408263 1.8101286251830757 1.0322700064391122 1.1903641576837418 0.3357688144669695 0.08959155470832057 0.2519752086684679 1.7056743374427874 0.019722416458947255 0.01795122936939168 5.92122823791846e-10 9.227588198408263 0.15809415124462967 SS(ph)LSGDEEDELFK ddPTM_A549_PD325901_60min_R1 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.179)S(0.801)LS(0.02)GDEEDELFK;S(0.272)S(0.727)LSGDEEDELFK 283.21 1.5141999999999996e-98 19565600.0 12507.0 13148.3 12786.0 12822.2 14533.4 13494.3 14879.4 15210.3 14600.4 15597.6 18945.7 True False 13776.701432833228 14256.353384962862 13653.734848464008 13614.198172670966 13512.62412150814 13384.406894820906 15445.643709320095 14906.918634250482 13986.795962258682 14612.764874096925 16615.499006687452 0.8291476185751835 0.8580153613938964 0.8217469028747565 0.8193673971026381 0.8132541861107838 0.805537461705719 0.9295925270197115 0.8971694818344429 0.8417921096820046 0.8794659051898194 1.0 14.02024200111763 -14.00874974086212 0.226486525927646 1.5180482452747068 0.8225831271915846 0.24151217354801569 0.049576427268640484 10.793946785649426 0.19928194196356389 2.52254831750737 0.023566755683829262 9.800545722714233e-15 14.00874974086212 -0.6954651180831223 SS(ph)LSIALSSGLEK ddPTM_A549_PD325901_60min_R1 1 SSLSIALSSGLEK 13 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.178)S(0.821)LSIALSSGLEK 106.58 9.1691e-05 1126000.0 1854.6 1744.6 1659.5 1348.7 2044.9 2020.6 1866.7 2101.7 1871.3 1602.0 2266.3 True False 2042.8776267156404 1891.6235646742334 1772.123649384173 1432.006135880062 1901.273278522025 2004.1449035277935 1937.7382899974336 2059.7799447482453 1792.6557686210422 1500.8494466009702 1987.5594672593643 1.027832203447253 0.9517318076940781 0.8916078630984287 0.7204846745313477 0.9565868643637019 1.0083446239177432 0.9749334910061188 1.0363362599602945 0.9019381800399292 0.7551217819260945 1.0 10.956782310763087 -6.9658034745513095 24.99999734383317 0.9653987543499553 0.8934613478272387 0.03637896360663906 0.09898742927607676 276.93433346935797 202456.81097110952 0.011647596047563605 0.022011835330430735 1.0819234288186828e-07 6.9658034745513095 -0.07193740652271652 SS(ph)LSLAK ddPTM_A549_PD325901_60min_R1 2 SSLSLAK 7 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.259)S(0.72)LS(0.022)LAK;S(0.184)S(0.815)LS(0.001)LAK 99.802 0.011342 6303400.0 3717.3 3764.3 3649.9 3826.0 4283.2 3872.6 4238.200000000001 3786.3 3856.1 4275.2 4577.3 True False 4094.6775594683772 4081.5307718120007 3897.6041626316905 4062.3233305235517 3982.362808237829 3841.062829556437 4399.487020232027 3710.779276205113 3694.0415269489667 4005.263142389804 4014.3211178953766 1.0200174423552668 1.0167424707547712 0.9709248583170451 1.0119577411020226 0.9920389254573878 0.9568399529458234 1.0959479550899967 0.9243852614736999 0.9202157521682457 0.9977435847209151 1.0 11.970940311593136 SS(ph)LSSR ddPTM_A549_MK2206_60min_R1 1 SSLSSR 6 0 Q8WUM0;Q6AWC2-7;Q6AWC2-3;Q6AWC2-2;Q6AWC2-4;Q6AWC2;Q6AWC2-6 Q8WUM0;Q6AWC2-7 NUP133;WWC2 Nuclear pore complex protein Nup133;Protein WWC2 1 S(0.392)S(0.595)LS(0.013)SR 66.07300000000001 0.056491 5368600.0 1129.8 1005.1 784.15 1040.8 1041.8 1237.6 769.63 991.82 1118.1 1405.6 1194.2 True False 1320.4826190419967 1056.2552968707953 895.3542611751808 1295.796046723287 888.5526000641153 1368.562010547608 909.4618087479174 1132.4135223213605 864.8521352388063 1088.0739837684034 897.6471817567 1.4710485877734343 1.1766931577768656 0.9974456327295186 1.4435471675936282 0.9898684228309094 1.524610156820551 1.0131617713856085 1.2615352059650224 0.9634655495116539 1.2121399207637875 1.0 9.810004698049278 -8.763771061470548 24.977141454150285 0.9827476062172334 1.2259685634684454 0.10924349367838337 0.19231308812103803 52.20654536049482 559238.7647054594 0.027567237599023457 0.03003788092794518 1.7227764980567636e-09 8.763771061470548 0.24322095725121196 SS(ph)LVTSK ddPTM_A549_MK2206_60min_R1 1 SSLVTSK 7 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.255)S(0.738)LVT(0.005)S(0.002)K 58.37 0.032908 6385900.0 2940.8 3019.7 3382.6 3059.4 3627.7 3081.5 2672.6 2968.0 3891.8 4332.3 3822.9 True False 3437.135144342985 3173.389831818463 3862.3035437750013 3808.9531373416853 3094.070135585133 3407.582284665849 3158.176825305256 3388.7230891187887 3010.313513927544 3353.6304210869757 2873.5684233274883 1.196120863676149 1.104337661166179 1.3440791986789002 1.3255132908688687 1.07673445687516 1.1858364871367817 1.0990435444889117 1.179273498974063 1.0475872053332596 1.167061272619217 1.0 11.488627686652526 -8.39446838450981 0.5667366170957485 1.0047409900660373 1.225799862949448 0.20167320705759317 0.09157523057057158 0.41275638388577574 0.2888815411617669 0.023417807805572434 0.029860334626502248 4.032102980188701e-09 8.39446838450981 0.22105887288341064 SS(ph)LVTSK ddPTM_A549_PD325901_60min_R1 1 SSLVTSK 7 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.202)S(0.786)LVT(0.011)S(0.002)K 52.725 0.046627999999999996 22231000.0 6478.1 7531.8 6643.4 6578.0 8136.7 8559.3 8658.9 8419.0 8339.4 7482.6 8007.7 True False 7135.7519430748325 8166.531218854395 7094.261074009527 6984.308120278083 7565.206262091135 8489.595898626867 8988.419177831885 8251.076440422266 7988.92401904469 7010.147359011495 7022.803664992638 1.0160830750039647 1.1628591098969525 1.010175054355156 0.9945184933894069 1.077234481123582 1.2088613470636969 1.2798904264741833 1.1748977807185952 1.1375690393949045 0.9981978271663449 1.0 12.777831387282857 -5.198015170154828 20.929096450186425 1.0929239032078097 1.0160776022269622 0.05650377766906434 0.09360790916179534 32314.695519853143 10660129.773226222 0.014086099303752923 35.3778815180908 6.338475702118098e-06 5.198015170154828 -0.07684630098084755 SS(ph)LYEGLEKPESR ddPTM_A549_MK2206_60min_R1 2 SSLYEGLEKPESR 13 1 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6;Q01814-6;Q01814;Q01814-8;A0A2R8Y4R4;Q01814-5 P20020-6 ATP2B1;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 1 S(0.082)S(0.918)LYEGLEKPESR;S(0.115)S(0.885)LYEGLEKPESR 226.74 9.833899999999998e-47 39702900.0 8345.8 10338.4 8497.5 6695.7 11475.2 8188.1 7137.2 10245.8 11849.9 10820.9 10445.4 True False 9754.367004780232 10864.5804011233 9702.573275949886 8336.146800581395 9787.213281105516 9054.559307179106 8433.936854586795 11698.173526446531 9165.916570401867 8376.451174558559 7851.518901625715 1.2423541389883832 1.383755237330411 1.235757488139129 1.061724095048072 1.2465375685561937 1.1532239074536639 1.0741790168575516 1.4899249015403042 1.1674068018232746 1.066857416954591 1.0 12.93875605966905 -9.962290435977787 0.9068622075722875 1.0175982376964563 1.2279190588644082 0.27549551706517217 0.11994505028393819 0.4367512153674149 0.7305957160310266 0.04618170602384737 0.023634031071144316 1.0907106758547068e-10 9.962290435977787 0.21032082116795192 SS(ph)LYEGLEKPESR ddPTM_A549_PD325901_60min_R1 4 SSLYEGLEKPESR 13 1 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6;Q01814-6;Q01814;Q01814-8;A0A2R8Y4R4;Q01814-5 P20020-6 ATP2B1;ATP2B2 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 1 S(0.17)S(0.83)LYEGLEKPESR;S(0.152)S(0.846)LY(0.002)EGLEKPESR;S(0.208)S(0.792)LYEGLEKPESR;S(0.1)S(0.9)LYEGLEKPESR 215.15 3.6684999999999997e-38 135195400.0 11872.1 12813.2 12584.4 11828.5 15112.5 12601.7 13191.099999999999 12819.599999999999 11174.0 13376.1 14417.3 True False 13077.346852221912 13893.013331929307 13438.453060144731 12559.119580527402 14051.050135294692 12499.07593328032 13693.09452894688 12563.903021218348 10704.395638631722 12531.530763220488 12644.063498794712 1.0342677299484064 1.0987775672950115 1.0628270778160631 0.9932819130277694 1.1112764608176873 0.9885331511085648 1.0829662892987026 0.9936602281707929 0.846594580899733 0.991099954885156 1.0 13.62617256517231 -8.525315548237302 24.280488316525208 0.9271674298756754 1.0516826224204325 0.43821988983976634 0.0526203712620724 35.549203297664434 354210.8054092158 0.010505268432358678 0.011950337702964645 2.983214297385304e-09 8.525315548237302 0.12451519254475718 SS(ph)LYFPR ddPTM_A549_MK2206_60min_R1 1 SSLYFPR 7 0 B8ZZW8;E7ENZ2;E9PG19;O94868-2;O94868 B8ZZW8 FCHSD2 F-BAR and double SH3 domains protein 2 1 S(0.155)S(0.845)LYFPR 123.72 0.0062193000000000005 4699500.0 913.76 819.21 910.06 751.14 1243.5 952.85 831.24 904.2 1600.3 1316.2 1327.2 True False 1067.9803487128827 860.9042898711807 1039.1201924696622 935.1693337199554 1060.5827972544892 1053.6799545493595 982.2655482551598 1032.3731189963648 1237.8346051539763 1018.8695058594005 997.6196111434358 1.0705286231179858 0.8629584665887262 1.0415996045613618 0.937400711928766 1.0631134205941353 1.0561941072325847 0.9846093012639581 1.0348364321077208 1.240788163471661 1.0213005984230892 1.0 9.962346015629246 -8.537926229812394 24.941881880037148 1.1149743066913727 1.0010687283679232 0.14771248106184243 0.08233950503213862 263.8576164252159 437353.9520657614 0.016719508396622357 0.018961244246332026 2.8978357784680042e-09 8.537926229812394 -0.1139055783234495 SS(ph)LYFPR ddPTM_A549_PD325901_60min_R1 1 SSLYFPR 7 0 B8ZZW8;E7ENZ2;E9PG19;O94868-2;O94868 B8ZZW8 FCHSD2 F-BAR and double SH3 domains protein 2 1 S(0.321)S(0.679)LYFPR 134.48 0.0055956 9927700.0 2654.4 2540.9 2899.4 2591.7 2797.4 2906.1 2201.8 2892.6 3025.0 2826.0 2394.3 True False 2923.872733933998 2755.0305602893254 3096.170719508569 2751.78342282224 2600.9202745060966 2882.433685114384 2285.5907038711907 2834.9048237992 2897.869769720866 2647.565877711824 2099.8162787182173 1.3924421691400575 1.312034099464677 1.4744960075262168 1.310487708239885 1.2386418282716458 1.372707562241539 1.088471752046029 1.3500727909061168 1.380058721846752 1.2608559637074381 1.0 11.036047390945342 -10.831204212701119 0.8140548137178358 0.9744723780889126 1.3253921792034897 0.16466003674405283 0.1208094935005386 0.4029898445899472 0.41554747764418465 0.09395761085999928 0.017412361882387678 1.4750127939146378e-11 10.831204212701119 0.3509198011145771 SS(ph)LYGIAK ddPTM_A549_PD325901_60min_R1 1 SSLYGIAK 8 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.303)S(0.697)LYGIAK 183.43 1.633e-09 34409000.0 9008.6 8773.3 8127.7 8659.0 9322.4 9127.0 8228.5 8710.7 9726.2 9393.0 9808.7 True False 9923.146440219198 9512.656780899031 8679.294597830509 9193.846763984175 8667.626784534074 9052.67273804721 8541.640070307974 8536.958255088042 9317.44163777159 8799.924376980594 8602.292082472284 1.1535467925389604 1.1058281548334858 1.0089513951188802 1.0687671001914967 1.0075950341415298 1.0523558897160217 0.9929493196019359 0.9924050675380619 1.0831347678552403 1.0229743762027097 1.0 13.070505402085121 -5.5836496127522235 3.862474056696243 1.0330560490254073 1.145816596647255 0.6441192372102507 0.03022446467022436 0.11847443641627256 3.45870520563079 0.004952823798778264 0.024033509164526862 2.6082570338678877e-06 5.5836496127522235 0.11276054762184784 SS(ph)PAAKPGS(ph)TPSRPSSAK ddPTM_A549_MK2206_60min_R1 2 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 2 S(0.473)S(0.528)PAAKPGS(0.488)T(0.436)PS(0.073)RPS(0.001)S(0.001)AK;S(0.471)S(0.529)PAAKPGS(0.523)T(0.466)PS(0.01)RPSSAK 68.369 0.00051377 13380700.0 3153.1 3267.6000000000004 2659.0 2636.1 3713.3999999999996 2996.7 2803.1000000000004 2829.3 4656.3 5138.1 4974.6 True False 3685.2661941063216 3433.906882951956 3036.0861830833474 3281.944618339026 3167.163779111235 3313.808804951531 3312.3869860858968 3230.3619393678555 3601.6554845831793 3977.399641434572 3739.269528024516 0.9855577851466821 0.9183362839228427 0.8119463334560251 0.8776967249196668 0.8470006656044585 0.8862182252752026 0.885837985537206 0.8639018704475362 0.9631976132209866 1.0636835915745988 1.0 11.868540749634553 -8.880089179358322 3.7771208100473292 0.9845647274259678 0.8818761491090767 0.5601177384292617 0.047925119300119626 0.12682193359709495 3.2795003791309165 0.007657164368644764 0.008061337612514959 1.3179860714731843e-09 8.880089179358322 -0.10268857831689104 SS(ph)PAAKPGS(ph)TPSRPSSAK ddPTM_A549_PD325901_60min_R1 3 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 2 S(0.451)S(0.549)PAAKPGS(0.551)T(0.305)PS(0.143)RPS(0.001)S(0.001)AK;S(0.46)S(0.54)PAAKPGS(0.518)T(0.44)PS(0.04)RPS(0.001)SAK;S(0.461)S(0.539)PAAKPGS(0.476)T(0.405)PS(0.08)RPS(0.018)S(0.021)AK 104.18 4.9454999999999995e-09 45103000.0 4915.6 4665.0 4773.5 5439.0 5987.8 5343.6 5038.299999999999 4996.7 5211.799999999999 6152.5 5762.3 True False 5414.628093326539 5058.135921818924 5097.458415387374 5774.954677134765 5567.23758478859 5300.083493264931 5230.035263563548 4897.036898664678 4992.766170522708 5764.030100007782 5053.573630229286 1.0714453749990918 1.0009027852215997 1.0086839113010206 1.1427467174101011 1.101643706443038 1.0487793156037306 1.0349181878500215 0.9690245471782102 0.9879674337101092 1.1405849645741208 1.0 12.303088233966154 -7.990815736385693 3.001062057740779 0.9923331351984194 1.0625466921831155 0.0 0.0584873637482379 0.19842561142851103 3.671155743059256 0.006429120399286476 0.008854058856904943 1.0213727425244322e-08 7.990815736385693 0.07021355698469611 SS(ph)PAAKPGST(ph)PSRPSSAK ddPTM_A549_PD325901_60min_R1 1 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 2 S(0.46)S(0.54)PAAKPGS(0.168)T(0.725)PS(0.106)RPS(0.001)SAK 96.54 6.3147e-05 7121400.0 1668.5 1972.1 1591.2 1354.4 2340.1 1803.8 1668.8 2329.2 2224.1 1755.8 1937.3 True False 1837.8848917152186 2138.295788085553 1699.188400662908 1438.0582119344233 2175.7394489067387 1789.110450847984 1732.3070972024002 2282.742278777949 2130.628811516091 1644.9384883532969 1699.0243815565325 1.0817295570717305 1.2585433212715813 1.0000965372293393 0.8464023398045475 1.280581651755622 1.0530222345655338 1.0195893101989368 1.343560636067302 1.2540307453175872 0.9681664996745452 1.0 10.730490840479282 SS(ph)PAAKPGSTPS(ph)RPSSAK ddPTM_A549_MK2206_60min_R1 1 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 2 S(0.473)S(0.527)PAAKPGS(0.238)T(0.216)PS(0.509)RPS(0.019)S(0.017)AK 56.247 0.0039201999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)PAAKPGSTPSRPSSAK ddPTM_A549_MK2206_60min_R1 1 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 S(0.215)S(0.785)PAAKPGSTPSRPSSAK 69.08800000000001 0.00030262 12867000.0 2788.7 2340.2 2425.0 1816.8 3469.6 2804.7 2649.4 2454.2 3709.7 4182.0 4679.0 True False 3259.36438283096 2459.306184197627 2768.901464451717 2261.9160815592504 2959.2264361513285 3101.4914923908177 3130.7616856109184 2802.0903656722844 2869.458873173597 3237.283295474859 3517.0751661694826 0.9267258243959566 0.6992475474660119 0.7872738948219248 0.6431241798061281 0.8413884538539111 0.8818382735245077 0.8901605844894962 0.7967104009107936 0.815865097446519 0.9204475714974979 1.0 11.780160452921056 -13.754065491227518 0.20763015435961332 1.5458834305917055 0.769050495524951 0.3260656299196346 0.08117170938355303 17.871208935047882 0.33702812262398407 4.0993897043847465 0.06460676356810961 1.7617103619999523e-14 13.754065491227518 -0.7768329350667545 SS(ph)PAAKPGSTPSRPSSAK ddPTM_A549_PD325901_60min_R1 3 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 S(0.178)S(0.822)PAAKPGSTPSRPSSAK;S(0.222)S(0.778)PAAKPGSTPSRPSSAK;S(0.242)S(0.756)PAAKPGS(0.001)T(0.001)PS(0.001)RPSSAK 78.354 7.5083e-05 58714600.0 6447.220000000001 5470.45 5186.32 5550.45 7556.1 6958.53 6058.3 6456.59 6335.499999999999 6821.2 6713.78 True False 7101.737028207493 5931.464020045947 5538.294863075696 5893.288690513452 7025.385603129869 6901.862038773264 6288.851921728964 6327.808247353129 6069.2409672947215 6390.508267886726 5888.027622157955 1.206131744606985 1.0073770710117818 0.9406027312497419 1.0008935196458146 1.1931645117784067 1.172185743966286 1.0680744597838872 1.0746906525268636 1.0307765786381198 1.0853393832321412 1.0 12.523568724103349 -8.930167562687748 1.7112521970931072 1.0108470975345252 1.0799130625138114 0.027906146290232803 0.08210161329509583 0.5565917902860167 3.2484766259015863 0.016601960255547225 0.016805219863031125 1.1744443347709586e-09 8.930167562687748 0.06906596497928619 SS(ph)PAFGDRR ddPTM_A549_MK2206_60min_R1 1 SSPAFGDRR 9 1 P13716;P13716-2 P13716 ALAD Delta-aminolevulinic acid dehydratase 1 S(0.184)S(0.816)PAFGDRR 121.36 5.3313e-05 14605000.0 1010.4 1568.8 1754.2 1046.9 1481.1 1455.9 1369.6 1080.6 1931.0 1880.2 1650.7 True False 1180.9308180917276 1648.645219113424 2002.9719377077122 1303.3905469971276 1263.2321520013063 1609.9623716517958 1618.4385916104463 1233.7783591987074 1493.631583173361 1455.4615141443874 1240.7856329976414 0.9517605512877279 1.3287107581431497 1.6142771841004382 1.0504558662951613 1.0180905697218914 1.2975346658086717 1.3043659989037952 0.9943525508253952 1.2037789151095049 1.1730160919320978 1.0 10.277038171342914 -14.999999999906132 0.17670511660441499 0.130430043248503 1.2557044108974456 0.01931146850455545 0.1894052089472422 73.47214579737629 0.8072087470883665 22.06164331624834 0.21859366239478464 1.000000000216139e-15 14.999999999906132 1.1252743676489425 SS(ph)PAKKES(ph)VSPEDSEK ddPTM_A549_MK2206_60min_R1 1 SSPAKKESVSPEDSEK 16 2 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 2 S(0.462)S(0.537)PAKKES(0.917)VS(0.083)PEDSEK 75.358 0.00016017 16514000.0 2449.2 2905.8 2978.2 2442.5 3733.2 2113.0 2135.6 2038.3 3849.9 3972.7 4191.8 True False 2862.565082809046 3053.692808324701 3400.5535428577764 3040.9126096479927 3184.0512253401375 2336.596257504117 2523.610876345843 2327.235267031951 2977.9037970269924 3075.264310840022 3150.860372205436 0.9085026769388076 0.9691615773463416 1.079246028435582 0.9651054792756539 1.0105339016058874 0.7415740405750265 0.8009275493789807 0.7386031090305056 0.9451081435711532 0.9760078034456029 1.0 11.621530108585914 -5.206496751751797 18.858006469571016 0.9416154792892062 0.9084988649391365 0.0 0.10897454365325987 12263.47302495603 4206426.837608902 0.016022899603907827 10.702347068566077 6.21588896827172e-06 5.206496751751797 -0.03311661435006974 SS(ph)PAKKES(ph)VSPEDSEK ddPTM_A549_PD325901_60min_R1 1 SSPAKKESVSPEDSEK 16 2 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 2 S(0.459)S(0.541)PAKKES(0.556)VS(0.289)PEDS(0.155)EK 89.48299999999999 3.6110000000000002e-06 38353000.0 2766.5 3421.4 4141.4 3878.8 4197.1 4346.0 4210.6 4846.7 4654.1 4136.1 4001.2 True False 3047.353043410342 3709.7333854043454 4422.460308261288 4118.384666606051 3902.310175208957 4310.607616911707 4370.836687128728 4750.028766337403 4458.5043620687175 3874.945940128759 3509.077765696585 0.8684199230920758 1.0571818674608164 1.260291336798969 1.1736373319696187 1.1120614690721484 1.2284160981128927 1.2455798870735701 1.3536402107618943 1.2705629968230876 1.104263341784204 1.0 11.776876204742333 -5.39622232878616 3.1970916043047666 1.1683789305589705 0.8614113605766602 0.4957795008416329 0.09524222920529311 0.24691093497165956 4.06905868640069 0.017269215487649266 0.15321005530522835 4.0158517433827885e-06 5.39622232878616 -0.30696756998231023 SS(ph)PAKKESVS(ph)PEDSEK ddPTM_A549_MK2206_60min_R1 1 SSPAKKESVSPEDSEK 16 2 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 2 S(0.458)S(0.542)PAKKES(0.048)VS(0.917)PEDS(0.035)EK 95.206 1.9103e-06 15470000.0 1737.9 2129.8 1818.1 1807.5 2288.4 1330.6 1627.8 1850.4 2942.9 3307.1 3035.2 True False 2031.2150324244012 2238.1977228886853 2075.9339185648114 2250.337581141759 1951.779391425149 1471.4032088192039 1923.550189415512 2112.699866612334 2276.337848845614 2560.0238131193 2281.4760727415287 0.8903074008501864 0.981030548437513 0.9099082578018326 0.9863516028189802 0.855489748388989 0.6449347536005919 0.8431165298630916 0.9260232407669368 0.9977478510700574 1.1220910198032694 1.0 11.155751808084858 -8.600834716894983 3.387645498623763 0.999048096392638 0.8738689221445062 0.36028164544528085 0.09278760584522136 0.23796676019559046 5.4891723441150955 0.01586673664275803 0.018130878249559626 2.5070632056316495e-09 8.600834716894983 -0.12517917424813185 SS(ph)PAQTR ddPTM_A549_PD325901_60min_R1 1 SSPAQTR 7 0 B3KT28;Q9UNN5;Q0P5T2;A0A140T9G8;Q5SQH8-4 B3KT28 FAF1;C6orf136 FAS-associated factor 1 1 S(0.021)S(0.979)PAQTR 105.1 0.0049713 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)PAVSR ddPTM_A549_PD325901_60min_R1 1 SSPAVSR 7 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.045)S(0.954)PAVS(0.001)R 88.921 0.012722 3950400.0 1702.9 1102.3 1009.5 1528.4 1587.5 1045.5 1009.0 941.59 1197.2 1599.9 1555.5 True False 1875.777154391277 1195.194689522187 1078.0107406166442 1622.805796751751 1475.9994765776885 1036.98579463442 1047.398047145986 922.8092487869345 1146.885847375146 1498.8820409593573 1364.1833611269215 1.3750183500565052 0.8761246644548305 0.7902242259619143 1.1895804061201767 1.0819656056781093 0.7601513287611052 0.7677839189306296 0.6764554348651654 0.8407123851941203 1.0987394243843909 1.0 10.413821856010657 -7.242142304739814 24.145031544443654 0.8789632112653091 1.0441482908814226 0.2363836367521004 0.18006719739543198 759.0121017771276 949696.1363604792 0.026128977088741887 0.04520726033933317 5.726083743597169e-08 7.242142304739814 0.1651850796161135 SS(ph)PELTR ddPTM_A549_MK2206_60min_R1 1 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.424)S(0.576)PELTR 147.36 0.0037715000000000005 155850000.0 3275.6 3004.1 3311.8 2733.6 4454.2 4033.4 3444.7 3671.3 4761.5 4838.0 5364.6 True False 3828.4411992688656 3156.9958584514507 3781.4630391633814 3403.3321227159668 3798.993080443059 4460.211710845766 4070.5574010809773 4191.718017884708 3683.02785255306 3745.092439863072 4032.4217645720896 0.9494148734402365 0.782903188894593 0.9377647627007738 0.8439921023680715 0.9421120364491928 1.1060875997724589 1.0094572539122615 1.039503867058788 0.9133538274471379 0.928745220246199 1.0 11.977430827724644 -6.958207328252468 7.045092442608504 0.9799988133996255 0.87739308087149 0.41349062642795076 0.06513702059685095 0.18410819646270662 24.01257232966407 0.009797488161267468 0.018535590495771026 1.1010135701527394e-07 6.958207328252468 -0.10260573252813543 SS(ph)PELTR ddPTM_A549_PD325901_60min_R1 1 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.317)S(0.683)PELTR 149.57 0.0032324 244600000.0 5692.0 5198.7 5237.2 5650.6 6331.2 4994.5 4750.1 4668.0 4286.6 4766.3 4918.4 True False 6269.847649771068 5636.812693839239 5592.627885841995 5999.6247285562995 5886.518353454273 4953.8264479212 4930.867654854457 4574.893078024845 4106.449109053045 4465.355004578154 4313.467980306426 1.4535514528905027 1.3067936796041322 1.2965502262624184 1.390905126906747 1.3646834473629494 1.1484555978016748 1.1431330144020615 1.0606067087809579 0.9520063966630685 1.0352122758219564 1.0 12.074632531279683 -7.735231720670167 1.0575709852883282 0.9777914947415611 1.3652488135482657 0.8907026964325595 0.05481019839673902 0.09469923191574987 0.21379442983853839 0.009489880156735688 0.016220259900578703 1.8397901074618046e-08 7.735231720670167 0.38745731880670453 SS(ph)PELTRK ddPTM_A549_MK2206_60min_R1 1 SSPELTRK 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.284)S(0.716)PELTRK 56.725 0.0076047 10535000.0 2295.8 2523.5 2893.3 2805.2 4323.2 3211.3 2747.2 2107.7 4698.3 4623.2 4536.0 True False 2683.2749130789684 2651.935371260023 3303.6134462260443 3492.474125930215 3687.263006908409 3551.11763451158 3246.330679667213 2406.4729295605366 3634.1425516433997 3578.815909048151 3409.586012768704 0.7869796811197188 0.7777880837523022 0.968919227687526 1.0243103159301743 1.0814400907030415 1.0415099138760096 0.9521187227745218 0.705796222928072 1.065860353143679 1.049633561272744 1.0 11.735380864502973 -5.809793205120474 4.156343973243549 1.0064681364984907 0.7787319749537728 0.3865463302360349 0.09829545295534284 0.14444102675960932 5.142969034722764 0.014111094833275864 0.05099424434549988 1.549554283391378e-06 5.809793205120474 -0.22773616154471787 SS(ph)PEQPRPSTSK ddPTM_A549_MK2206_60min_R1 1 SSPEQPRPSTSK 12 1 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 1 S(0.183)S(0.817)PEQPRPSTSK 155.99 7.591e-14 24628000.0 1621.7 2309.0 1692.4 1987.6 2674.2 1827.9 1869.8 1864.4 2731.0 3205.7 3091.2 True False 1895.4033132416419 2426.5182374636015 1932.4077684280776 2474.5620892267557 2280.8287224913197 2021.3271647381805 2209.518456916773 2128.684409485536 2112.4328605108476 2481.5301435446568 2323.5697272201546 0.8157290444256401 1.0443061850210156 0.8316547361545931 1.0649829270186109 0.9816054563682197 0.8699231794332389 0.9509154948236356 0.9161267615722584 0.9091325453951818 1.067981784438843 1.0 11.182127223509156 -10.914994402607071 1.1735409131287677 0.9999364528041788 0.9334991837541163 0.1770117016948416 0.07774997561761016 0.8856777133324542 2.170148022773943 0.047312096255935375 0.011258890150325338 1.2162016755284418e-11 10.914994402607071 -0.06643726905006242 SS(ph)PEQPRPSTSK ddPTM_A549_PD325901_60min_R1 1 SSPEQPRPSTSK 12 1 H3BT57;P29590-12;P29590-13;P29590-11;H3BUJ5;H3BRN3;P29590-2;P29590-4;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 H3BT57;P29590-2 PML Protein PML 1 S(0.111)S(0.889)PEQPRPSTSK 208.82 1.7769000000000001e-31 33347000.0 5772.0 4897.6 5071.5 5725.8 6180.7 5770.8 6304.1 6706.3 6143.0 5632.6 5723.9 True False 6357.969190878181 5310.337940128692 5415.682487406948 6079.469661764708 5746.5889542574605 5723.804518102641 6544.005975235886 6572.537585509425 5884.831072857943 5276.956674734471 5019.896586791633 1.2665538185801055 1.0578580351836866 1.0788434370653586 1.211074681849229 1.1447624178908191 1.1402235920881583 1.3036137024126142 1.3092974072021932 1.172301255835056 1.0512082437353818 1.0 12.293441928666898 -10.36728908429009 0.9458545318644923 1.0093654559715979 1.1826795479545553 0.3693655342250003 0.08015015450163121 0.40809898677123185 0.7034788849851505 0.04181999269894324 0.015672874641514657 4.2925060477021675e-11 10.36728908429009 0.17331409198295744 SS(ph)PESDR ddPTM_A549_MK2206_60min_R1 1 SSPESDR 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.228)S(0.772)PESDR 132.76 0.005642 4096600.0 1464.6 960.53 736.73 338.43 96.509 165.2 0.0 0.0 124.6 1422.2 1566.8 True False 1711.7886739678784 1009.4168742446569 841.2093921259848 421.3453651927002 82.31265394469926 182.681354349115 0.0 0.0 96.3782989453137 1100.9240322392027 1177.7203185198427 1.4534763874323338 0.8570938773590071 0.7142692359958734 0.3577635186953779 0.06989151214453844 0.15511437773164063 0.0 0.0 0.08183462357721892 0.9347924247607806 1.0 10.201781257624129 -10.958435765812736 1.2688165344591245 0.9943448781343129 0.35994905276345046 0.1922802317476816 0.43009753714563687 0.5867491008300249 1.7034024095935754 0.31408583835328496 0.07577949815482626 1.1004345926884424e-11 10.958435765812736 -0.6343958253708625 SS(ph)PESDR ddPTM_A549_PD325901_60min_R1 1 SSPESDR 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.215)S(0.785)PESDR 160.63 0.0011089000000000001 8941900.0 1256.1 1428.5 1008.8 979.12 871.23 1089.9 526.87 606.77 731.29 1122.9 1592.9 True False 1383.6183473080525 1548.8847083211851 1077.2632344072028 1039.5980186571405 810.0378103803337 1081.024215755194 546.9203261643268 594.6674963481433 700.5564244294775 1051.9999023646867 1396.983398225055 0.9904329207247677 1.1087352292726809 0.7711353161218133 0.7441734955318778 0.5798478431522749 0.7738275323305168 0.39150094901572874 0.4256797160966275 0.5014779884425065 0.7530511126340592 1.0 10.448099160498439 -5.866674526716182 4.2502573117512625 0.6971373854392531 1.0492635592329846 0.4205316832074033 0.17335327223047267 0.2181553044522563 6.96368214571114 0.03222625084361499 0.11052809850925394 1.3593317888808022e-06 5.866674526716182 0.35212617379373157 SS(ph)PFKVS(ph)PLTFGR ddPTM_A549_MK2206_60min_R1 1 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 2 S(0.457)S(0.543)PFKVS(0.625)PLT(0.374)FGR 54.768 0.005581 5313900.0 977.68 746.85 803.94 850.69 1302.8 1275.9 1081.7 1109.9 1462.7 1279.2 1354.3 True False 1142.6884820189239 784.8614749457294 917.9507807551814 1059.109088188925 1111.159845808724 1410.9148911261248 1278.2308882484085 1267.231723926195 1131.400785451929 990.2278315570154 1017.9899332214861 1.1224948741907714 0.7709913913018681 0.9017287409220981 1.0403924966500553 1.091523412508016 1.3859811822118964 1.255641973003972 1.2448371860770462 1.1114066539651801 0.9727285106085323 1.0 9.991507579510618 -6.458707798335317 3.1335157185176703 1.1114715265356265 0.9167749752589527 0.3028301172380037 0.13818530363844134 0.2867427054853586 5.5065734117148954 0.021504557360581527 0.05283712553938034 3.477700691243273e-07 6.458707798335317 -0.19469655127667385 SS(ph)PFKVS(ph)PLTFGR ddPTM_A549_PD325901_60min_R1 3 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 2 S(0.452)S(0.548)PFKVS(0.641)PLT(0.359)FGR;S(0.364)S(0.636)PFKVS(0.569)PLT(0.431)FGR;S(0.458)S(0.542)PFKVS(0.719)PLT(0.281)FGR 116.96 4.6638999999999995e-06 36260000.0 4666.2 4793.5 5436.0 4843.8 5779.4 4758.5 4998.2 5450.5 4691.5 5289.6 5284.7 True False 5139.909188925116 5197.465067789713 5804.919649323505 5142.99052493204 5373.474881847618 4719.748353675649 5188.409236119985 5341.785501665469 4494.332570130721 4955.613753271219 4634.715402473446 1.1090021161131185 1.1214205439703893 1.2524867538199964 1.1096669543479063 1.1593969457067228 1.0183469628268484 1.119466630756021 1.1525595506500086 0.9697105819555164 1.0692379839820405 1.0 12.178265036663673 -8.762957486885218 24.99999920449901 0.9856966561290599 1.1302608119403224 0.42683335069338113 0.05824715982576369 19.339341479684958 318477.3481689274 0.009089111861645016 0.009929729871008817 1.726006842641673e-09 8.762957486885218 0.14456415581126247 SS(ph)PFKVSPLTFGR ddPTM_A549_MK2206_60min_R1 1 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 1 S(0.288)S(0.712)PFKVSPLTFGR 88.133 5.3518999999999994e-05 96381000.0 2450.1 3763.2 3614.3 3079.6 4993.8 3160.3 3153.3 2964.0 5387.6 5225.6 5458.7 True False 2863.6169808061572 3954.7308060732007 4126.862087821789 3834.102138248499 4259.218635246861 3494.720848362642 3726.2137930236718 3384.156076869305 4167.317202229311 4045.1333306631846 4103.1541375442075 0.6979062654760687 0.9638270153897167 1.0057779818848753 0.9344280058031796 1.0380352510461768 0.8517157121604695 0.9081340032850582 0.8247694245517102 1.015637498015979 0.9858594620294354 1.0 12.002517635649491 -5.262388306094879 5.435398927349096 0.9757347135374161 0.6875181233528459 0.5115748863740246 0.06843583555109047 0.08687575637091205 9.580191289563885 0.010040720130496337 0.09280314978460354 5.4652709022583464e-06 5.262388306094879 -0.28821659018457024 SS(ph)PGAVAGLSNAPGTPR ddPTM_A549_MK2206_60min_R1 1 SSPGAVAGLSNAPGTPR 17 0 V9GYB2;U3KPY3;Q9BWG4-2;Q9BWG4 V9GYB2 SSBP4 Single-stranded DNA-binding protein 4 1 S(0.03)S(0.97)PGAVAGLSNAPGTPR 161.99 2.0037e-22 13400000.0 7621.5 8645.8 6828.6 7114.5 10283.0 7872.2 7564.5 8134.2 11851.0 11566.0 12020.0 True False 8907.822872215069 9085.83429080243 7796.99816088866 8857.552819382036 8770.384321807733 8705.23097885656 8938.871733526008 9287.247759942751 9166.767422158206 8953.232567064142 9035.10226487651 0.9859127889281084 1.0056149918881536 0.8629673391964897 0.9803489279601528 0.9707011680323914 0.9634900329460234 0.9893492593078228 1.0279073205453848 1.0145726250153844 0.9909387082279486 1.0 13.141325215159293 -7.8832084387768955 3.056337131408665 1.0086964140390522 0.959946643365704 0.2815275886103472 0.035071409440400214 0.23892857307796375 4.493935406670852 0.0053946827643478286 0.007663849074910405 1.3085537344879882e-08 7.8832084387768955 -0.04874977067334818 SS(ph)PGEIVEER ddPTM_A549_MK2206_60min_R1 1 SSPGEIVEER 10 0 H0YA93;Q86UW6-2;Q86UW6 H0YA93 N4BP2 NEDD4-binding protein 2 1 S(0.193)S(0.807)PGEIVEER 95.477 0.00055645 2905500.0 537.93 426.94 539.77 435.4 691.37 690.17 518.03 770.85 883.53 661.51 823.98 True False 628.7194328741916 448.669422391819 616.3175024606613 542.0730195458484 589.6703888523012 763.2033313022323 612.1493455110682 880.1203481291168 683.4118657074881 512.0744315613522 619.3630253088976 1.015106500037886 0.7244045964288104 0.9950828145630467 0.875210494322773 0.9520593977307773 1.2322390909944885 0.9883530667749634 1.4210088625974575 1.103410823348144 0.8267759143451663 1.0 9.27464144944907 -7.027557329702694 14.626863163668842 1.0875998391859383 0.8985060141470556 0.2546425114639699 0.1571512274251661 4.209645472080178 2234.7137889656556 0.020070812029176422 0.03502014260663725 9.38518137982363e-08 7.027557329702694 -0.18909382503888272 SS(ph)PGEIVEER ddPTM_A549_PD325901_60min_R1 2 SSPGEIVEER 10 0 H0YA93;Q86UW6-2;Q86UW6 H0YA93 N4BP2 NEDD4-binding protein 2 1 S(0.312)S(0.688)PGEIVEER;S(0.161)S(0.839)PGEIVEER 131.83 1.0649e-06 6388900.0 1349.6599999999999 1625.8 1084.47 1270.06 1601.9099999999999 1411.72 1193.74 1271.79 1512.7399999999998 1355.43 2097.5 True False 1486.676489632822 1762.8118717455957 1158.0686556478777 1348.5087216844597 1489.397367889489 1400.223420374275 1239.1684289395919 1246.4231507500465 1449.164798495054 1269.8479184808698 1839.5207971480024 0.8081868342764968 0.958299506305481 0.6295490963969259 0.7330760944780788 0.8096659576769419 0.7611892306654999 0.6736365421150996 0.6775803528193343 0.787794734771057 0.6903145212870901 1.0 10.84511427180346 -10.28059025315132 0.8144556018269589 0.9925475943488058 0.7586176614434784 0.0 0.12223711139689065 0.36923394630943396 0.46806447947026464 0.04771503337810049 0.01712758371162399 5.2409467466181906e-11 10.28059025315132 -0.23392993290532738 SS(ph)PGGQDEGGFMAQGK ddPTM_A549_MK2206_60min_R1 2 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.418)S(0.582)PGGQDEGGFMAQGK;S(0.409)S(0.591)PGGQDEGGFMAQGK 153.94 5.572399999999999e-17 22677000.0 4652.9 5490.7 5096.6 4767.5 7026.5 5103.1 4997.7 6447.8 7910.3 6915.8 6688.700000000001 True False 5438.195767516828 5770.1531773241195 5819.374516999846 5935.537714021209 5992.911157948266 5643.106654836374 5905.717398723369 7361.795395559348 6118.629680153409 5353.515976768301 5027.7111912711725 1.0816444224080164 1.1476699750259984 1.1574599843967 1.180564572668007 1.191976016512806 1.1224007187671432 1.174633381682015 1.464243890607814 1.2169811366206211 1.0648018100289396 1.0 12.295686063519975 -10.631747497746852 1.0654746656915106 1.0071050703539002 1.1941755774392748 0.29206761629946676 0.09481338688853248 0.42730814463013633 0.909563792815469 0.05451391021936835 0.017124966841874752 2.3348151477607366e-11 10.631747497746852 0.18707050708537465 SS(ph)PGGQDEGGFMAQGK ddPTM_A549_PD325901_60min_R1 3 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.379)S(0.621)PGGQDEGGFMAQGK;S(0.279)S(0.721)PGGQDEGGFMAQGK;S(0.04)S(0.96)PGGQDEGGFMAQGK 190.27 1.8802000000000003e-34 88759000.0 27259.6 25947.5 26796.5 26117.3 29169.4 24693.9 26647.4 25542.4 25979.8 30694.3 32071.0 True False 30026.974524543108 28134.18688775917 28615.071630444694 27730.506304308103 27120.641972967074 24492.801065636453 27661.481389016775 25032.93679437484 24887.95935318814 28756.25665967799 28126.47031481935 1.067569950599966 1.0002743526952884 1.0173715830730423 0.985922015593168 0.964239084016087 0.870809624936536 0.9834679246774316 0.8900134469125128 0.884858962913491 1.0223912328070122 1.0 14.77964089491749 -6.4806573028479475 1.5330478918750794 0.93793549966811 1.0319113384731509 0.37190503352964954 0.04794190912660325 0.33919247161293825 1.542467452837141 0.0076233369395130495 0.02406552935359699 3.3063033500578284e-07 6.4806573028479475 0.0939758388050409 SS(ph)PGNKDKEAPCSR ddPTM_A549_MK2206_60min_R1 1 SSPGNKDKEAPCSR 14 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;H7C1R1;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 S(0.235)S(0.765)PGNKDKEAPCSR 49.708 0.0055882 15563000.0 2339.2 2550.8 2964.0 2514.8 3554.4 2990.7 2925.4 2450.3 3990.8 4444.1 4737.5 True False 2733.9997720508413 2680.624824652298 3384.3397693339757 3130.926112893661 3031.5524684852085 3307.1738889340077 3456.9073130090537 2797.637528729034 3086.8901719980568 3440.174723438506 3561.048001651618 0.7677514514779944 0.7527629010923248 0.9503774640960513 0.879214801777885 0.851309071677543 0.9287080340956192 0.9707556066095532 0.7856219650595798 0.8668487957944835 0.9660568242390861 1.0 11.798086167506561 -14.999999999999998 0.14927164338801147 1.4877020789657707 0.8176450195499343 0.3530517086050994 0.06682137941525594 50.82003070013845 0.5002234227713266 7.354356790733147 0.13490035532987246 1.000000000000004e-15 14.999999999999998 -0.6700570594158364 SS(ph)PGNKDKEAPCSR ddPTM_A549_PD325901_60min_R1 1 SSPGNKDKEAPCSR 14 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;H7C1R1;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 S(0.472)S(0.528)PGNKDKEAPCSR 53.278 0.0041535 31384000.0 5040.0 4800.7 4554.9 4603.9 4960.4 5119.0 5572.2 6027.0 4212.0 5220.0 4928.2 True False 5551.657089748102 5205.271837058114 4864.022904838784 4888.272446784474 4611.998616451 5077.312561199043 5784.253120224838 5906.7867569099635 4034.9842876245557 4890.408309149227 4322.062642433746 1.2844925094889355 1.2043490036338378 1.1253938934350707 1.1310045344534607 1.067082779219968 1.1747429367057987 1.3383084880435085 1.3666592193545493 0.9335783910231489 1.1314987110865764 1.0 12.077504266918181 -8.782569215358386 24.998240228825047 0.9686342080530493 1.2038994063626272 0.3860720838285646 0.10037897744305754 125.55114457781039 148536.14020280988 0.016670711186543556 0.017755832001349066 1.649798045036473e-09 8.782569215358386 0.23526519830957782 SS(ph)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR ddPTM_A549_MK2206_60min_R1 1 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 36 1 P40222 P40222 TXLNA Alpha-taxilin 1 S(0.16)S(0.84)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 146.98 3.829399999999999e-40 51764000.0 913.54 793.3 443.43 1028.8 646.84 792.75 783.85 563.53 888.92 1195.1 1395.8 True False 1067.7232180913672 833.6755815417387 506.31504180693827 1280.8560461845875 551.6906928637669 876.6382788151385 926.265398681256 643.4121032382451 687.5810393135495 925.1260799670023 1049.1843378797532 1.017669802666973 0.7945940016856085 0.4825796797826074 1.2208112530282416 0.5258281818985713 0.8355426660168176 0.8828433338540888 0.613249817032616 0.6553481733277198 0.881757424854955 1.0 10.035052461129183 -10.98529720361225 1.2908388383334382 0.9985730092886773 0.765266931308938 0.06881124248415182 0.20776620204895055 0.6530449666582038 1.9552344663149908 0.13118066884222868 0.030905996197546377 1.0344340233329239e-11 10.98529720361225 -0.23330607797973935 SS(ph)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR ddPTM_A549_PD325901_60min_R1 1 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 36 1 P40222 P40222 TXLNA Alpha-taxilin 1 S(0.187)S(0.813)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR 138.19 2.4222e-30 59164000.0 712.33 707.76 553.66 487.84 837.64 878.26 883.62 838.57 1129.7 916.96 919.14 True False 784.6452172103694 767.4054190839356 591.2346970280447 517.9727688349736 778.8070561011247 871.1077417461746 917.2466426354166 821.844063504561 1082.2226376375734 859.0629891106272 806.0916069085174 0.9733945999259338 0.9520077029793808 0.733458445617017 0.6425730827560371 0.9661520470210165 1.08065601264229 1.1378938011191997 1.0195417697703821 1.3425553973797841 1.0657138490813258 1.0 9.654799990466861 -7.186244169574012 2.6558281086159146 1.1491323288494668 0.8272391398669589 0.5137536951291737 0.12435709505997726 0.18863594028244499 2.6053979979815236 0.023416673060424976 0.0426115087713762 6.512621377175032e-08 7.186244169574012 -0.32189318898250796 SS(ph)PIMR ddPTM_A549_MK2206_60min_R1 2 SSPIMR 6 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.305)S(0.695)PIMR;S(0.359)S(0.641)PIMR 74.929 0.016358 170424000.0 7565.799999999999 7470.1 6473.5 5847.1 9163.0 7226.700000000001 6394.2 7183.5 10219.6 9809.3 10329.400000000001 True False 8842.72207394932 7850.296182623144 7391.5396412899745 7279.639762486292 7815.134838152701 7991.424597304777 7555.943372134571 8201.783123546107 7904.876917347736 7593.372317145272 7764.32490306285 1.1388912989023767 1.011072602014166 0.9519874211309961 0.9375753659683457 1.0065440248475186 1.0292491230180671 0.9731616678165957 1.0563420807275452 1.0181022839769933 0.977982298776531 1.0 12.922644774458915 SS(ph)PIMR ddPTM_A549_PD325901_60min_R1 2 SSPIMR 6 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.379)S(0.621)PIMR;S(0.379)S(0.621)PIMR 100.45 0.017246 142398000.0 10828.6 10384.900000000001 10214.400000000001 9279.8 12401.900000000001 10157.5 10238.3 9464.400000000001 11606.2 11486.900000000001 11752.0 True False 11927.911500406004 11260.071968809718 10907.610608176972 9852.99217004508 11530.833328232338 10074.780687708393 10627.924109112735 9275.625117321837 11118.431775647698 10761.615173633385 10306.578502065951 1.1573104981459228 1.0925130940935093 1.0583153862351646 0.9559906003791704 1.118783825875967 0.9775097221341598 1.0311786891238806 0.8999713256404674 1.0787703963462763 1.0441501194092901 1.0 13.331277857032555 -5.546504381487473 1.8499697606116121 1.0246644120993076 1.1640464938947142 0.36817261792924816 0.057104154235404894 0.43093760045611734 2.2252971833940953 0.008002775530287491 0.08507380946856531 2.8411595210969527e-06 5.546504381487473 0.13938208179540656 SS(ph)PKGPPLPAENK ddPTM_A549_MK2206_60min_R1 1 SSPKGPPLPAENK 13 1 Q9BYV8 Q9BYV8 CEP41 Centrosomal protein of 41 kDa 1 S(0.457)S(0.543)PKGPPLPAENK 72.446 0.00016642 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)PKGPPLPAENK ddPTM_A549_PD325901_60min_R1 1 SSPKGPPLPAENK 13 1 Q9BYV8 Q9BYV8 CEP41 Centrosomal protein of 41 kDa 1 S(0.437)S(0.563)PKGPPLPAENK 95.662 4.707e-05 7803600.0 2580.1 2920.9 2911.0 2871.0 3704.3 3692.5 3202.4 3335.1 4011.7 3271.9 3462.1 True False 2842.0298526307683 3167.05449389944 3108.5579652650335 3048.335149485917 3444.12274714125 3662.429504244472 3324.2690844205185 3268.5788141646626 3843.102200062544 3065.3116756140535 3036.2836480601195 0.9360225137221748 1.0430693772378183 1.0238035459075407 1.003969161917233 1.1343218046646264 1.2062211337153552 1.0948480016168427 1.0765064114655285 1.265725684923377 1.0095603806885698 1.0 11.568090857541502 -6.7604930053590735 24.485384206039996 1.1287755810793874 1.0062475969991107 0.3070157819307969 0.07749679015324565 21.10603112153169 546030.2340143664 0.01413112758930389 0.028127318000832072 1.7358292194880605e-07 6.7604930053590735 -0.12252798408027665 SS(ph)PKSNDSDLQEYELEVK ddPTM_A549_PD325901_60min_R1 1 SSPKSNDSDLQEYELEVK 18 1 Q53EP0;Q53EP0-2 Q53EP0 FNDC3B Fibronectin type III domain-containing protein 3B 1 S(0.155)S(0.844)PKSNDS(0.001)DLQEYELEVK 223.15 1.685e-64 12184000.0 4294.4 4178.9 4539.7 5803.1 6013.7 5925.6 5269.5 6065.4 6081.9 5875.4 5379.6 True False 4730.36432662981 4531.070568850826 4847.79134143376 6161.544307203666 5591.318458138735 5877.343878226421 5470.033706081044 5944.420838785751 5826.298893376968 5504.426241297964 4717.943304094108 1.0026327197541616 0.9603910595786265 1.0275221699309047 1.305980998511966 1.185117772247652 1.2457427949857338 1.1594106485625404 1.259960210549232 1.2349234651296168 1.166700379065888 1.0 12.203942366360756 -6.020094285906534 23.213169081378375 1.153120601196736 0.9846229865798076 0.4909769976249283 0.08293306822954515 274.43571590659263 317034.2777382928 0.015620041646370144 0.04202728901493282 9.547852783718808e-07 6.020094285906534 -0.16849761461692847 SS(ph)PLLR ddPTM_A549_MK2206_60min_R1 1 SSPLLR 6 0 P56524-2;P56524;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UQL6-2;Q9UKV0-5;Q9UKV0-7;Q9UQL6;Q9UQL6-3 P56524-2 HDAC4;HDAC9;HDAC5 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 1 S(0.344)S(0.656)PLLR 84.09700000000001 0.040706 3894800.0 477.53 461.88 421.06 365.05 459.04 345.62 298.9 360.29 388.23 494.06 403.89 True False 558.1253895124137 485.3877191510126 480.7726394317693 454.48726638771734 391.51582408661113 382.1932789960117 353.20626097573194 411.36221084184945 300.296524875916 382.45150286042787 303.59296620307595 1.838400264975437 1.5988108197023663 1.583609282667558 1.4970283141662344 1.289607690794532 1.2589003091078181 1.1634204355692128 1.3549793856774854 0.9891419048063357 1.2597508685514234 1.0 8.24599455581963 -5.842305368988245 0.30304699688247505 0.9562670389952096 2.2444957433173855 0.7681035609084904 0.12010457267430219 1.0811056925356939 0.09161006297476156 0.036576603787258556 0.48930838572781854 1.4377872597756766e-06 5.842305368988245 1.2882287043221758 up SS(ph)PLPAK ddPTM_A549_MK2206_60min_R1 1 SSPLPAK 7 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 S(0.116)S(0.884)PLPAK 107.29 0.009284899999999999 30299000.0 3004.8 3381.8 3055.3 2827.0 5209.6 3598.2 3608.1 3964.7 5439.3 4229.9 4942.0 True False 3511.936779693215 3553.9191751643175 3488.587482201786 3519.6151269088523 4443.274741115388 3978.959135708147 4263.645065997118 4526.708366384522 4207.307234777243 3274.3626522068644 3714.7650077387448 0.9453994458268585 0.9567009401027126 0.9391139075915228 0.9474664264298418 1.196111929518821 1.0711200109344798 1.147756333742491 1.218571930378989 1.1325904131250335 0.8814454333950016 1.0 11.85905523488953 -6.7277769095058515 24.205787203575458 1.0908606900113498 0.9472752746880596 0.3873287511410688 0.0879181391145532 97.9515975928989 70433.68207332188 0.011071469911488253 0.02304576992349458 1.87164332828609e-07 6.7277769095058515 -0.14358541532329017 SS(ph)PNPFITGLTR ddPTM_A549_MK2206_60min_R1 1 SSPNPFITGLTR 12 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 S(0.173)S(0.827)PNPFITGLTR 112.44 5.0153999999999994e-05 9096800.0 1002.6 1194.5 1304.1 988.91 1558.0 1081.7 995.19 1117.0 1429.9 1242.8 1375.9 True False 1171.814368783419 1255.2949478779874 1489.040989604735 1231.1929943938562 1328.82026387012 1196.1647760256528 1176.003141051986 1275.3381706690325 1106.029933081092 962.050616837914 1034.2260570918133 1.1330350465917445 1.213752969450226 1.4397635598080327 1.19044863156504 1.2848450827149813 1.1565796160553161 1.137085198142118 1.2331328938425832 1.0694276415653141 0.9302130904950774 1.0 10.01433584342949 -8.650643927215844 0.5890208495044151 1.007221299458271 1.2575487170554547 0.585983844114965 0.08474596449009944 0.34693848025694013 0.2646723252881703 0.025037855835248538 0.026671903498280893 2.235404252562761e-09 8.650643927215844 0.2503274175971837 SS(ph)PNPFITGLTR ddPTM_A549_PD325901_60min_R1 1 SSPNPFITGLTR 12 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 S(0.134)S(0.866)PNPFITGLTR 133.15 5.3101e-08 9541500.0 1277.0 1330.4 1360.1 1219.9 1488.1 1668.2 1562.9 1349.1 1621.8 1511.5 1788.6 True False 1406.640099922286 1442.5174770392066 1452.4045649457146 1295.2504524060846 1383.5809896663045 1654.6147322899476 1622.377014751695 1322.1911421515244 1553.6413859614204 1416.0636320457966 1568.613538869568 0.896741016870217 0.9196130476336234 0.9259161220758045 0.8257294867794623 0.8820407037053828 1.054826247057868 1.0342745198545666 0.8429043288153503 0.9904551678682199 0.9027485718797841 1.0 10.615274242301238 -7.2382418976212675 24.49275090415719 0.9896122330493902 0.8900766416110082 0.2731962943273274 0.06166708744913517 461.93916636963866 487732.213223028 0.008235126225938198 0.014257272284907002 5.777741434280268e-08 7.2382418976212675 -0.09953559143838198 SS(ph)PNVANQPPS(ph)PGGK ddPTM_A549_MK2206_60min_R1 1 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 2 S(0.445)S(0.555)PNVANQPPS(1)PGGK 101.92 6.8347e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)PPLRTPDVLESSGPAVR ddPTM_A549_MK2206_60min_R1 2 SSPPLRTPDVLESSGPAVR 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 S(0.163)S(0.837)PPLRTPDVLESSGPAVR;S(0.461)S(0.538)PPLRT(0.001)PDVLESSGPAVR 103.02 5.728200000000001e-10 59908000.0 2730.7 3499.3 3094.4 2927.3999999999996 3886.9 2898.4 2691.4 2678.5 4419.6 4293.9 5155.200000000001 True False 3191.5754007948135 3677.3994232812374 3533.232450144082 3644.6131314159793 3315.142158945295 3205.1067641977897 3180.3925419541138 3058.185577562225 3418.567656650952 3323.9050077569336 3875.0215637180863 0.8236277781464768 0.9490010217524493 0.9117968486229384 0.9405400902902253 0.8555157963467984 0.8271197234635482 0.820741895150262 0.7892047895155178 0.8822060988406045 0.8577771641011577 1.0 11.919988623379952 -10.286871505599755 0.9199166748637366 0.992702651531432 0.8691038663740243 0.0 0.0633374331128959 0.3672230764470892 0.6047291526130054 0.025837615847456648 0.010214273921855565 5.165691836222907e-11 10.286871505599755 -0.12359878515740774 SS(ph)PPLRTPDVLESSGPAVR ddPTM_A549_PD325901_60min_R1 1 SSPPLRTPDVLESSGPAVR 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 S(0.233)S(0.767)PPLRTPDVLESSGPAVR 151.0 1.0469e-21 51060000.0 2255.3 2589.1 2280.1 2735.2 2527.3 2902.6 2922.7 3059.9 2710.3 2922.7 3375.3 True False 2484.2563957358902 2807.292543447241 2434.8412973551376 2904.147091910093 2349.7911667116787 2878.9621879539636 3033.9249478628067 2998.8678940548893 2596.3955163221367 2738.160223208897 2960.159497789585 0.8392305879432976 0.9483585413365417 0.8225371974629361 0.9810779095108497 0.7938055934034359 0.9725699544581117 1.0249194173923073 1.0130764562835917 0.8771133846878593 0.9250042861722622 1.0 11.531459197161823 SS(ph)PPSAGNSPSSLK ddPTM_A549_PD325901_60min_R1 1 SSPPSAGNSPSSLK 14 0 P57682;P57682-2 P57682 KLF3 Krueppel-like factor 3 1 S(0.327)S(0.673)PPSAGNSPSSLK 67.234 0.0038445999999999997 10095000.0 14216.0 14737.0 13729.0 13448.0 15728.0 17777.0 13608.0 14778.0 17341.0 15651.0 17096.0 True False 15659.197854733926 15978.938709506003 14660.73249918367 14278.652417376046 14623.319538654414 17632.230005945574 14125.859886583316 14483.241196883275 16612.218074951914 14662.793188983625 14993.300380473063 1.0444130016315896 1.0657385835020428 0.9778189009190718 0.9523355135319134 0.975323589041109 1.1760072538071333 0.9421447932158097 0.9659808600744051 1.1079760728723405 0.9779563416257648 1.0 13.872030369136086 SS(ph)PQAGR ddPTM_A549_MK2206_60min_R1 1 SSPQAGR 7 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.211)S(0.789)PQAGR 60.828 0.028489999999999998 4866700.0 1913.4 1165.3 947.79 832.4 1083.3 845.01 682.71 679.13 698.45 1798.1 1739.1 True False 2236.335141861353 1224.6087926012706 1082.2008738114203 1036.3380373678565 923.948005038833 934.4283973277591 806.7495698586212 775.3987572483978 540.2521901954605 1391.9079611653137 1307.2334732817578 1.7107388906184617 0.9367942434391148 0.8278558466641753 0.7927719558512918 0.7067964705029303 0.7148137011684023 0.6171426805904139 0.5931601149271293 0.4132790364059289 1.0647738063736878 1.0 10.35230111566905 SS(ph)PQAGRR ddPTM_A549_PD325901_60min_R1 1 SSPQAGRR 8 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.169)S(0.831)PQAGRR 83.869 0.0013677 21577000.0 1858.2 1424.9 1129.8 1268.1 1469.5 999.27 849.98 977.28 1404.2 1667.1 2183.1 True False 2046.84309606546 1544.9813236869845 1206.4750220393112 1346.4276569359427 1366.2873894997874 991.132276426913 882.326454026903 957.7873837386709 1345.1863572370366 1561.8390214909339 1914.5925398111108 1.0690750399912228 0.8069504563302063 0.6301471446025477 0.7032450137243186 0.7136178383075608 0.517672693180292 0.4608429395185835 0.5002565108882979 0.7025966774997199 0.8157553051183524 1.0 10.902821677678611 -10.28288953455347 0.9358864274885365 0.9801942936211951 0.670403347153532 0.1953021136428239 0.16718204959462013 0.45173241107675033 0.7721230602285319 0.0798250487044783 0.032111449474150094 5.213272970154724e-11 10.28288953455347 -0.30979094646766314 SS(ph)PQLDPLR ddPTM_A549_MK2206_60min_R1 1 SSPQLDPLR 9 0 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.183)S(0.817)PQLDPLR 117.02 0.00018415 100040000.0 841.77 878.48 1048.1 1081.9 1284.9 852.9 1011.4 798.11 1351.9 1148.1 1060.3 True False 983.8401966994002 923.1908797085421 1196.7363401615848 1346.9655485683375 1095.892912096738 943.1533118908005 1195.1582882263474 911.2445366093663 1045.6968085406868 888.7434126099199 796.9982472086995 1.2344320707668694 1.1583348933850268 1.5015545446340375 1.690048319787114 1.375025498405859 1.1833819148209863 1.4995745503984614 1.143345722278296 1.3120440505396291 1.115113384154277 1.0 9.638432741159734 -10.593333612666845 0.39321659526253894 0.9033464604833842 1.3806074948095486 0.33005317092198583 0.16076615251301127 1.7288869975861658 0.36318971697541136 0.3408456143562141 0.053751006967993245 2.550741143101729e-11 10.593333612666845 0.4772610343261644 SS(ph)PQLDPLR ddPTM_A549_PD325901_60min_R1 2 SSPQLDPLR 9 0 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.226)S(0.774)PQLDPLR;S(0.246)S(0.754)PQLDPLR 100.82 0.00075921 315900000.0 7073.3 7164.1 6539.2 6349.7 7302.1 6849.0 6844.299999999999 6957.4 6566.3 6935.9 7275.8 True False 7791.376208911753 7767.843849411132 6982.989435404028 6741.906547784998 6789.225686877441 6793.224014778712 7104.763581844666 6818.6291990252885 6290.341245923346 6497.966090311903 6380.922725096278 1.2210422449198668 1.2173543206941013 1.0943541766992118 1.0565723545387824 1.0639880749809587 1.0646146815194684 1.1134382734179666 1.0685961094948704 0.9858043290797626 1.0183427021855775 1.0 12.63954934731442 -2.000000000000877 0.24312581205985956 0.9867962747222127 2.518434090767199 0.7544958083566036 0.03667824415771926 14.907322022592185 0.1795251229468465 0.020038924100702453 9.398398269230343 0.009999999999979805 2.000000000000877 1.5316378160449866 SS(ph)PQLDPLRK ddPTM_A549_MK2206_60min_R1 4 SSPQLDPLRK 10 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.155)S(0.845)PQLDPLRK;S(0.204)S(0.796)PQLDPLRK;S(0.276)S(0.724)PQLDPLRK;S(0.226)S(0.774)PQLDPLRK 145.23 3.2988e-08 171266000.0 15130.8 17504.8 17338.1 13888.400000000001 24829.0 18629.1 18147.9 18985.4 27092.100000000002 21980.5 22726.2 True False 17684.50912745676 18395.719550954018 19796.90329105581 17291.058623473968 21176.686990777427 20600.41899700424 21445.138519777476 21676.638590349026 20955.78260719369 17015.08978387977 17082.657328788406 1.0352317433455793 1.0768652204919422 1.1588889778695755 1.0121995829263843 1.2396600003846938 1.205925904881763 1.2553748580811976 1.268926617981071 1.2267285003649948 0.9960446701231447 1.0 14.060244793434595 -6.748169984708537 24.999867157120605 1.1484808244960114 1.0775222249761764 0.1759847897057737 0.09612003804141143 517.1996416167094 974410.8050393552 0.01651762571535381 0.03422575925450831 1.7857884728367936e-07 6.748169984708537 -0.07095859951983496 SS(ph)PQLDPLRK ddPTM_A549_PD325901_60min_R1 1 SSPQLDPLRK 10 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.089)S(0.911)PQLDPLRK 164.04 3.8094e-09 36214000.0 7587.2 8040.0 8120.9 7930.8 7836.3 7201.4 7656.4 8251.9 8128.0 9490.3 9829.7 True False 8357.446958598566 8717.559016382458 8672.033108938795 8420.667503846367 7285.905321767399 7142.754186016562 7947.768491742841 8087.309381009679 7786.408425881382 8891.08083837527 8620.709215602248 0.9694616474793959 1.0112345513991965 1.0059535581183574 0.9767952140882059 0.8451630996416112 0.8285576055725439 0.921939053153367 0.9381257595805236 0.9032213279841407 1.0313630370786302 1.0 13.073590847682162 -6.53714803345686 24.99004892976284 0.9327763176196642 0.9961610727735946 0.24152015701393625 0.05627166468672018 296.55755319009916 519365.3991904948 0.00866324065473576 0.01803964860207116 2.903032959057137e-07 6.53714803345686 0.06338475515393038 SS(ph)PQLDPLRKS(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A549_MK2206_60min_R1 1 SSPQLDPLRKSPTMEQAVQTASAHLPAPAAVGR 33 2 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 2 S(0.49)S(0.513)PQLDPLRKS(0.814)PT(0.14)MEQAVQT(0.023)AS(0.021)AHLPAPAAVGR 47.871 0.0022325 4230700.0 542.14 897.89 515.87 534.96 880.09 693.4 830.65 642.73 1408.6 1191.1 980.32 True False 633.6399779495736 943.5887658017288 589.0281230790545 666.025224015267 750.6299268481735 766.7751277583318 981.5683528922433 733.8389457780729 1089.5543490719806 922.0296827451228 736.8794885444045 0.8598963437036833 1.2805197871169514 0.799354755066655 0.9038455193411619 1.018660362403262 1.0405705948919568 1.3320608975440273 0.9958737584454445 1.4786058860509643 1.2512625158917843 1.0 9.52528488576335 -7.600924495382782 5.716442734412112 1.2178381224570192 0.9809448847627512 0.3084793006785692 0.17159921324430644 0.2388928126628443 13.264578629734993 0.03180059850341666 0.04744650934037332 2.5065449925531958e-08 7.600924495382782 -0.23689323769426796 SS(ph)PQLDPLRKS(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_A549_PD325901_60min_R1 4 SSPQLDPLRKSPTMEQAVQTASAHLPAPAAVGR 33 2 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 2 S(0.483)S(0.517)PQLDPLRKS(0.868)PT(0.13)MEQAVQT(0.002)ASAHLPAPAAVGR;S(0.481)S(0.511)PQLDPLRKS(0.756)PT(0.228)MEQAVQT(0.016)AS(0.007)AHLPAPAAVGR;S(0.483)S(0.516)PQLDPLRKS(0.53)PT(0.464)MEQAVQT(0.007)ASAHLPAPAAVGR;S(0.485)S(0.516)PQLDPLRKS(0.931)PT(0.067)MEQAVQT(0.001)ASAHLPAPAAVGR 79.941 7.2347e-06 45157800.0 7246.18 7244.900000000001 7657.75 8143.75 9673.400000000001 8119.1 8391.279999999999 9903.9 9117.32 9064.2 9308.5 True False 7981.806859244221 7855.453148978759 8177.4509647915875 8646.770941701829 8993.973755418334 8052.9807414790275 8710.614752284608 9706.358945040747 8734.15074673436 8491.884865093954 8163.613511443229 0.977729635051419 0.9622519657462335 1.0016950157340205 1.0591842606930546 1.1017147912270906 0.9864480637392836 1.067004793903414 1.1889782547195549 1.0698878302471557 1.0402115255934858 1.0 12.99499216738514 -6.064454576143185 3.488437861795395 1.050122851949886 0.9710587780704333 0.32580152513545424 0.05183057156968149 0.2658805243712028 6.322168758932486 0.00815717269807089 0.025056527594469136 8.620757404712127e-07 6.064454576143185 -0.07906407387945269 SS(ph)PRPTAEK ddPTM_A549_MK2206_60min_R1 1 SSPRPTAEK 9 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.184)S(0.813)PRPT(0.003)AEK 71.085 0.00090996 19252000.0 1909.5 2324.9 2088.0 1978.6 2490.8 2040.5 1980.6 2199.8 2571.6 2985.7 2950.0 True False 2231.776917207198 2443.22747954921 2384.109797020696 2463.357088822728 2124.406619542809 2256.424355625722 2340.449382698343 2511.628386604959 1989.1367060013526 2311.2282963412927 2217.4335841419056 1.0064684386345861 1.101826677931678 1.0751662706250975 1.1109045639245105 0.9580474629479846 1.017583738138838 1.0554766552812185 1.1326735576510625 0.8970445474564693 1.0422987695641326 1.0 11.114675178697311 -8.768784803142877 24.999542611035913 0.9513821491600246 1.0564482501521135 0.21726589138737518 0.059129731768850086 122.64112979452224 417397.7384539336 0.010212797756226813 0.010978538107872214 1.7030021523827747e-09 8.768784803142877 0.1050661009920889 SS(ph)PRPTAEK ddPTM_A549_PD325901_60min_R1 1 SSPRPTAEK 9 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.182)S(0.817)PRPTAEK 77.597 0.00052982 340540000.0 6238.9 5340.5 5459.5 5823.5 7011.8 5455.7 5534.0 5324.9 6595.1 6325.4 6927.0 True False 6872.268535164567 5790.562677486381 5830.014500640488 6183.204368871905 6519.315357396806 5411.270588031569 5744.599398320997 5218.69069219676 6317.930882078039 5926.013164500483 6075.022913870902 1.1312333521365556 0.9531754463452274 0.9596695491187377 1.017807579746571 1.0731342827549613 0.8907407699938368 0.9456095030036086 0.8590404951858032 1.0399846999181703 0.9754717387106162 1.0 12.568674134971547 -4.08176080571687 15.760979821495892 0.9986784322584974 0.9966452657104898 0.0 0.07584956882691413 0.0 0.0 0.009688356991372313 0.0 8.283982910339855e-05 4.08176080571687 -0.002033166548007559 SS(ph)PSARPPDVPGQQPQAAK ddPTM_A549_PD325901_60min_R1 2 SSPSARPPDVPGQQPQAAK 19 1 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.244)S(0.75)PS(0.006)ARPPDVPGQQPQAAK;S(0.244)S(0.755)PS(0.001)ARPPDVPGQQPQAAK 165.88 7.3496e-28 160678000.0 24176.0 26349.0 28254.0 29303.0 30031.0 27282.0 29756.0 26253.0 28185.0 28229.0 30271.0 True False 26630.32972256944 28569.522701823553 30171.48634510419 31112.979758058467 27921.726161325696 27059.824437318286 30888.380863107996 25729.363319919907 27000.48246597771 26446.616122408737 26547.858903679225 1.003106496052636 1.0761516702902225 1.1364941502277899 1.171958155681872 1.0517505860879828 1.0192846261348822 1.1634980046856895 0.9691690547727793 1.0170493433741943 0.9961864050265666 1.0 14.69630789129062 -8.278466655821479 24.87946937015739 1.0053598836087967 1.089321936726426 0.42021365809606415 0.05225701170701696 608.8926634954922 889683.3119023817 0.008475460577138026 0.01025779954498853 5.266636494224075e-09 8.278466655821479 0.08396205311762928 SS(ph)PSDTRPK ddPTM_A549_MK2206_60min_R1 2 SSPSDTRPK 9 1 A0A0D9SGE8;Q8IWS0-3;Q5JRC6;Q8IWS0-2;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 1 S(0.123)S(0.877)PSDTRPK;S(0.356)S(0.602)PS(0.041)DT(0.001)RPK 71.34899999999999 0.0026111999999999997 66637100.0 6294.05 6316.780000000001 4816.75 4547.92 6156.280000000001 4987.17 4638.06 5122.21 6394.92 7613.61 7424.87 True False 7356.3317652516225 6638.2771208511585 5499.837578926929 5662.160604163885 5250.699367174805 5514.909019184477 5480.735465978935 5848.298953610231 4946.480830588806 5893.690213118209 5581.069863012785 1.3180863070724063 1.1894273470476984 0.9854450336441398 1.0145296051010775 0.9408051674773985 0.9881454908373798 0.9820223721443101 1.047881337656861 0.8862961675807774 1.0560144126088153 1.0 12.446325990607995 -5.567986826882149 1.7144005525844255 0.9604106170173797 1.3536442878595305 0.7991567737095177 0.051387885831202226 0.1533415052914349 0.6653510922851494 0.00738999090003333 0.08096320914943783 2.704040382425666e-06 5.567986826882149 0.3932336708421508 SS(ph)PSDTRPK ddPTM_A549_PD325901_60min_R1 1 SSPSDTRPK 9 1 A0A0D9SGE8;Q8IWS0-3;Q5JRC6;Q8IWS0-2;Q8IWS0-4;Q8IWS0-5;Q8IWS0 A0A0D9SGE8;Q8IWS0-5 PHF6 PHD finger protein 6 1 S(0.252)S(0.748)PS(0.001)DTRPK 90.10799999999999 0.00088976 207660000.0 2022.6 1735.5 1853.9 2198.4 2206.0 1714.4 1781.4 1729.5 1874.6 2001.3 1824.6 True False 2227.932863040577 1881.7566757377788 1979.7168024063367 2334.1901750713487 2051.0581702868535 1700.4384948075076 1849.192151819483 1695.0037657334963 1795.8170810971005 1874.9375764560045 1600.1857670923687 1.3922963876180836 1.1759613880062443 1.2371793594962404 1.4586994979418602 1.2817625381169002 1.0626506808002074 1.1556109233364658 1.0592543694557524 1.1222553768617787 1.171699945727474 1.0 10.644023683340865 -7.235983254808451 5.233471113319811 1.067403898448755 1.3078040135898208 0.6044726733482642 0.08467859273484381 0.0904509882626854 7.34830997448769 0.012493731966097084 0.02143897369222442 5.807868106193336e-08 7.235983254808451 0.24040011514106574 SS(ph)PSILAVQR ddPTM_A549_MK2206_60min_R1 1 SSPSILAVQR 10 0 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.224)S(0.774)PS(0.002)ILAVQR 112.85 0.00012329 13792000.0 863.4 976.28 1104.8 767.27 1213.4 796.99 1108.1 1243.4 1766.4 1335.9 1616.6 True False 1009.120811896673 1025.9684819709676 1261.4772527530956 955.2511844440593 1034.9104673812603 881.3269528008544 1309.4274265212725 1419.6557577527979 1366.3132203611724 1034.1192621771554 1215.1536041097647 0.8304471208279601 0.8443117631392812 1.0381216403314444 0.7861155834236175 0.8516704915996587 0.7252802854059957 1.0775818152476073 1.1682932535865322 1.124395480324604 0.8510193762168552 1.0 10.246922976995751 -7.782967958210998 24.999089745252714 1.071478151611318 0.8521845578920645 0.4594578244184323 0.10509694721483889 123.61003054068725 143536.09285557413 0.013878431136889564 0.019184992443386097 1.648283995694971e-08 7.782967958210998 -0.2192935937192536 SS(ph)PSKCPSLDDR ddPTM_A549_MK2206_60min_R1 1 SSPSKCPSLDDR 12 1 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;A0A2R8Y7V5 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.151)S(0.826)PS(0.023)KCPSLDDR 89.911 7.6357e-05 14255000.0 3278.2 3006.1 2761.0 2629.6 3934.0 3137.7 2834.9 2863.3 3561.5 4063.7 3911.6 True False 3831.4800157049694 3159.0976499087606 3152.55131684585 3273.8521180472285 3355.313811338288 3469.7293313633077 3349.9646344600283 3269.1815434884884 2754.8259365468275 3145.707347637777 2940.241765332028 1.3031173357515713 1.074434656073943 1.0722081952637819 1.1134635786242997 1.1411693592344396 1.1800830027905842 1.1393500609232152 1.1118750784493105 0.9369385773063249 1.0698805059938825 1.0 11.521719072140451 -8.682107756327376 5.323670785415179 0.970321806676447 1.139206866358039 0.44361088506574853 0.06746806793731952 0.09763436543971084 4.807123085102665 0.010259026984790288 0.011586628043126964 2.0791807406963593e-09 8.682107756327376 0.16888505968159206 SS(ph)PSKCPSLDDR ddPTM_A549_PD325901_60min_R1 1 SSPSKCPSLDDR 12 1 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;A0A2R8Y7V5 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.167)S(0.828)PS(0.005)KCPSLDDR 87.447 7.8187e-05 25480000.0 6276.0 6851.0 6868.1 6328.9 6641.1 6022.9 5566.1 6358.5 5339.1 6311.8 7641.2 True False 6913.134899852993 7428.35781358659 7334.210567240398 6719.821779025226 6174.652046551235 5973.851499286128 5777.920981386791 6231.67472935325 5114.716194220386 5913.27187082147 6701.380841557723 1.0315985709963094 1.1084816680646794 1.0944327356771406 1.002751811589806 0.9213999610736865 0.8914359056032276 0.8621985704133962 0.9299090555648393 0.7632331776314147 0.882396033090837 1.0 12.710242682920658 -6.64700168993637 2.060913617926865 0.8873673208168692 1.0816165218579694 0.6860650302632286 0.05592813291601918 0.2039347528413027 1.7492109830818812 0.012496695931054685 0.030633983966587622 2.2542304404236194e-07 6.64700168993637 0.19424920104110022 SS(ph)PSLAK ddPTM_A549_PD325901_60min_R1 1 SSPSLAK 7 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.194)S(0.797)PS(0.009)LAK 47.574 0.059147000000000005 5613800.0 3990.9 4534.7 3945.0 4278.4 4967.9 4139.1 4260.6 4491.3 4981.0 5183.6 5116.3 True False 4396.053230054701 4916.855083531031 4212.73142321215 4542.667051048605 4618.971842324598 4105.3925419142315 4422.739464489779 4401.717498143313 4771.665891894092 4856.306611361291 4487.027534897893 0.9797250397650474 1.095793383323403 0.9388690821368038 1.012400083511406 1.0294057271546713 0.9149470356454262 0.9856724591262003 0.9809874051159524 1.0634358391568632 1.0822992668512343 1.0 12.13154432188311 -8.738380839281444 24.993632722718598 1.029955820993038 0.9930162780162336 0.18211124797040035 0.04901128693593786 391.60171185628377 424465.6337766433 0.008057924585766266 0.009134397463668183 1.8264978305922807e-09 8.738380839281444 -0.03693954297680435 SS(ph)PSPQKR ddPTM_A549_MK2206_60min_R1 2 SSPSPQKR 8 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 S(0.095)S(0.904)PS(0.001)PQKR;S(0.143)S(0.854)PS(0.003)PQKR 101.65 0.00095338 35133000.0 5215.1 4366.6 2999.6000000000004 2564.8 5147.2 4302.2 5318.3 4572.8 5459.8 8144.2 8677.3 True False 6095.281383046486 4588.841288743421 3424.988384647165 3193.176115138247 4390.053698454608 4757.4559484307665 6284.566268809751 5221.008403612672 4223.164017509019 6304.419563607451 6522.486928703241 0.9345026597482673 0.7035416611644701 0.5251046758828997 0.48956420304748605 0.6730643919170584 0.7293929448129401 0.963523014688388 0.8004628388961263 0.6474775746846366 0.9665668375453311 1.0 12.671206432495323 -7.539204037766374 7.140629517802524 0.8357853503682886 0.6545023771648566 0.31820700533362645 0.14213589776107177 0.19282533951807102 46.52976423987445 0.02586571354389616 0.03894619818610146 2.8893221185377618e-08 7.539204037766374 -0.181282973203432 SS(ph)PSPQKR ddPTM_A549_PD325901_60min_R1 1 SSPSPQKR 8 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 S(0.048)S(0.476)PS(0.476)PQKR 67.563 0.0063899 5304600.0 2018.9 1816.9 1470.3 1114.5 1766.5 1253.9 931.52 1207.3 1495.3 1709.7 1955.3 True False 2223.8572417643722 1970.0165394111043 1570.0833996321476 1183.3401337868538 1642.4271340941646 1243.6886541292201 966.9695033473033 1183.2194543914727 1432.4577410458219 1601.7492502207724 1714.8104956679317 1.2968530618295306 1.1488246336186365 0.9156016968630625 0.6900704986214432 0.9577892940609899 0.7252630289300824 0.5638929233230878 0.6900001238507697 0.8353446311791255 0.9340677901536163 1.0 10.743833437114901 -5.679533343621392 2.7134132061682523 0.8530141295737557 1.2768638584295697 0.5852628775467252 0.13285795887162707 0.18684729986337692 2.616038933654473 0.021956810087958925 0.11778199609874107 2.0915423195858877e-06 5.679533343621392 0.42384972885581407 SS(ph)PSTGSLDSGNESK ddPTM_A549_PD325901_60min_R1 1 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 S(0.119)S(0.878)PS(0.003)TGSLDSGNESK 167.61 4.2777e-27 4765100.0 4117.2 3850.3 3695.5 3412.7 4503.1 3954.9 3597.0 3945.5 4562.5 3958.3 4611.8 True False 4535.175113077553 4174.778293629027 3946.298852846767 3623.4947281959553 4186.817790851648 3922.6926056429174 3733.8858033539245 3866.803907315127 4370.753991521139 3708.3722624722977 4044.577836608894 1.1212975238177123 1.0321913589699383 0.9757010526852595 0.8958894783525817 1.0351680595574873 0.9698645357093266 0.9231830747716643 0.9560463572527466 1.0806452905813582 0.9168749897471421 1.0 11.981773410107095 -8.752497717335133 24.982479833804398 1.0380824994960778 0.985334065136744 0.0 0.07017587184322985 301.2707773955311 841732.1609013162 0.010885277149102873 0.012254983610234119 1.7680815107995264e-09 8.752497717335133 -0.05274843435933374 SS(ph)PTPESR ddPTM_A549_MK2206_60min_R1 1 SSPTPESR 8 0 K7EQ92;Q8NCA9 K7EQ92 ZNF784 Zinc finger protein 784 1 S(0.154)S(0.829)PT(0.017)PESR 125.82 0.0010890999999999997 37264000.0 1544.1 1086.7 843.83 672.69 900.87 649.16 545.79 813.24 971.32 1363.8 1736.9 True False 1804.7063303794898 1142.0083883290147 963.4977825766154 837.4990801982016 768.3532163752727 717.8536803224669 644.9529781798083 928.5192604430481 751.3175708793107 1055.7166327997638 1305.5797939986699 1.3823025897575498 0.8747135897617746 0.7379846004093389 0.6414767477621172 0.5885149417194914 0.5498351641333675 0.4939973651127641 0.7111930383046309 0.5754666044410888 0.8086190041026626 1.0 10.350474919170917 -2.205969974440597 15.26634086499361 0.7631789478648267 1.079432593049422 0.0 0.2441626727951854 0.0 0.0 0.03450825109821863 0.0 0.006223433102612943 2.205969974440597 0.3162536451845953 SS(ph)PTPESR ddPTM_A549_PD325901_60min_R1 2 SSPTPESR 8 0 K7EQ92;Q8NCA9 K7EQ92 ZNF784 Zinc finger protein 784 1 S(0.259)S(0.739)PT(0.001)PESR;S(0.157)S(0.835)PT(0.008)PESR 104.2 0.0020804 124363000.0 4498.8 4435.4 3616.2999999999997 3325.33 4007.4 4196.2 3378.2 3731.3999999999996 3729.8 4036.2 4484.6 True False 4955.51486415848 4809.186724037654 3861.723864578477 3530.7280817276237 3725.934048779485 4162.027538445676 3506.7592496219704 3656.974299773329 3573.049476728888 3781.3536431777975 3933.0226302216583 1.2599761888171988 1.2227711803851524 0.9818717631840417 0.8977136451230229 0.9473462014047699 1.0582261862579498 0.8916193928495997 0.9298126768132093 0.9084741718171901 0.961437041862301 1.0 11.941422772090796 -5.761087783399979 4.159426302270046 0.9522784244672959 1.2516794331508545 0.8579007941821993 0.0455179559237412 0.053986213034279876 2.1205568481594606 0.006903318250534853 0.026769474536282013 1.7334535815382279e-06 5.761087783399979 0.29940100868355857 SS(ph)PTQETQAPFIAK ddPTM_A549_MK2206_60min_R1 1 SSPTQETQAPFIAK 14 0 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 S(0.227)S(0.773)PTQETQAPFIAK 171.11 1.4269e-22 8678800.0 3204.0 4002.6 3781.7 3434.3 4913.0 3638.6 2938.6 3332.9 5722.2 5333.2 5195.0 True False 3744.756869720801 4206.315243513124 4318.001924996725 4275.703654171583 4190.304208211748 4023.634236892796 3472.505582145486 3805.348781578172 4426.130836475716 4128.4264159317345 3904.9381252939643 0.9589798223598985 1.0771784618729323 1.1057798578233977 1.0949478626757263 1.0730782598242325 1.0303964128983212 0.8892600780669413 0.974496562936373 1.133470158670572 1.0572322232688247 1.0 11.931083973352319 -4.043635289582435 15.728281553800821 1.0479416268408253 1.0486019907264796 0.0 0.07105528133149713 0.0 0.0 0.01041557282140187 0.0 9.04408656286555e-05 4.043635289582435 0.0006603638856543803 SS(ph)PTQETQAPFIAK ddPTM_A549_PD325901_60min_R1 1 SSPTQETQAPFIAK 14 0 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 S(0.245)S(0.755)PTQETQAPFIAK 221.73 7.5793e-47 11929000.0 3965.9 4140.3 5142.9 4740.3 5915.4 4980.7 5297.1 5986.0 5134.0 4875.8 4696.8 True False 4368.515248458727 4489.2176113841115 5491.928120770023 5033.0975649975935 5499.922711022148 4940.138830545821 5498.684039184342 5866.6045340738465 4918.235833965921 4567.941155890766 4119.123375468291 1.0605448903219812 1.0898478152220303 1.333275947372094 1.2218856067707358 1.3352167948591436 1.1993180053715171 1.3349160823713402 1.4242361782637525 1.1940006126684133 1.10895953811324 1.0 12.008121622936873 -10.021888374377596 0.9614276208325528 1.0217912168478693 1.2479237713866527 0.3001940992375408 0.10818347913540625 0.3572142080628759 0.6666522627539944 0.0419031064269194 0.021296787005994973 9.508491566269713e-11 10.021888374377596 0.22613255453878334 SS(ph)PVEFECINEK ddPTM_A549_MK2206_60min_R1 2 SSPVEFECINEK 12 0 H0YB26;O75131 H0YB26 CPNE3 Copine-3 1 S(0.143)S(0.857)PVEFECINEK;S(0.241)S(0.759)PVEFECINEK 133.32 5.1862000000000005e-08 5084700.0 2769.3 3420.8 3240.7 2799.0 4334.6 3182.1 3501.0 3201.1 4716.9 4676.8 4867.3 True False 3236.690137115422 3594.9041085818467 3700.279990040691 3484.755125651886 3696.9860820099007 3518.8277098929702 4137.086382321972 3654.8657279576037 3648.5296813414957 3620.3076318213334 3658.6150793538627 0.8846763233936719 0.9825860416058669 1.0113881645877287 0.9524792988792137 1.0104878490422706 0.9617922720950519 1.1307793502705978 0.9989751992721461 0.9972433836865539 0.9895295223187855 1.0 11.837081923263685 -6.7672457602428855 24.7742094905195 1.0066929203881887 0.9633831195152258 0.21334581209595815 0.04945432896558122 181.27425325579281 773451.3707145669 0.006849031655478165 0.013200357809396119 1.7090479187458957e-07 6.7672457602428855 -0.04330980087296288 SS(ph)PVESLKK ddPTM_A549_MK2206_60min_R1 1 SSPVESLKK 9 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.117)S(0.883)PVESLKK 90.10799999999999 0.00086093 3397400.0 1958.0 2488.6 2213.8 1769.2 3889.4 2476.2 2537.8 2449.7 4171.1 3045.1 3556.5 True False 2288.462531496044 2615.259110329978 2527.750128661118 2202.654079422405 3317.274412257024 2738.2298404314697 2998.88541018472 2796.95247689161 3226.3525098779946 2357.209795086202 2673.322895593454 0.8560367081987025 0.9782802947750213 0.9455461339248283 0.8239386581595245 1.2408805601915955 1.0242795005964316 1.1217819647330682 1.046245659849747 1.2068697407245947 0.8817527426154491 1.0 11.38441838776391 -6.751150596920738 24.99999803138222 1.100298571340195 0.9096594167698829 0.3856311383487925 0.10194702994090334 135.10576193884586 328281.75067033083 0.012920691650952 0.026663639428729874 1.773574365654187e-07 6.751150596920738 -0.190639154570312 SS(ph)PVESLKK ddPTM_A549_PD325901_60min_R1 1 SSPVESLKK 9 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.122)S(0.878)PVESLKK 78.655 0.0014592000000000001 4749200.0 3049.8 3005.6 2472.4 3107.4 3359.0 3087.9 3227.1 2945.3 3091.1 3566.8 3582.1 True False 3359.4134508559036 3258.8924601541185 2640.1919317489765 3299.3370405825617 3123.075427920915 3062.75316618998 3349.9090564368785 2886.55368095685 2961.191816589806 3341.5916392861027 3141.524408802792 1.0693577428342016 1.0373602226430112 0.8404174496785561 1.0502344121018339 0.9941273794244024 0.9749257900425383 1.0663323344075177 0.9188385335694051 0.9425971061349451 1.063684760787695 1.0 11.617249074143507 -8.282653125615669 24.973130481657016 0.9680815919156681 0.999820443513129 0.010023897995340647 0.06908797556940934 2031.7308310664787 2391776.0044780136 0.010279653737713758 0.012433461701698281 5.216111596673397e-09 8.282653125615669 0.031738851597460926 SS(ph)PVGGGPR ddPTM_A549_MK2206_60min_R1 1 SSPVGGGPR 9 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.244)S(0.756)PVGGGPR 81.263 0.001607 5029700.0 1323.3 1331.5 1352.6 1122.2 1195.1 1357.1 1184.4 1434.3 1959.7 1695.8 2101.4 True False 1546.6406884212038 1399.2676627036742 1544.4190188937696 1397.1390503774728 1019.3023731393967 1500.707421229928 1399.590148878076 1637.6164173595282 1515.8310789978427 1312.7176022157505 1579.56438431044 0.9791564711028801 0.8858566808687103 0.9777499633659992 0.884509086337367 0.645305999086814 0.9500767655539809 0.8860608423309495 1.0367519258003726 0.9596513406191923 0.8310630546337738 1.0 10.625311028351675 -8.236020544532478 20.711710045308273 0.9845994789229695 0.883447811928699 0.08021694908592414 0.09833645526211028 100.07181217989665 81539.5305549846 0.013845202833947303 0.017864765483419698 5.80736944800093e-09 8.236020544532478 -0.10115166699427047 SS(ph)PVKKPSLLK ddPTM_A549_MK2206_60min_R1 1 SSPVKKPSLLK 11 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 S(0.375)S(0.625)PVKKPSLLK 85.90899999999999 7.9609e-05 22357000.0 7182.7 7633.3 7230.9 6694.9 11272.0 8690.1 8216.2 8815.6 11326.0 10102.0 10208.0 True False 8394.964159845063 8021.80236553959 8256.350350228424 8335.150800545482 9613.903731928105 9609.680613978479 9708.977187784572 10065.238296642732 8760.679083905477 7819.951183856295 7673.071873532396 1.0940812621347615 1.045448615333594 1.0760162926021841 1.086286032233957 1.2529406592802086 1.2523902776313418 1.2653311930095243 1.3117612427640497 1.1417433888668096 1.0191421783536978 1.0 12.905588553325614 -4.015773180236207 16.06997335752876 1.1175635593738666 1.1202651883675998 0.0 0.10812546682028422 0.0 0.0 0.016459623591380673 0.0 9.64332535823356e-05 4.015773180236207 0.002701628993733163 SS(ph)PVKKPSLLK ddPTM_A549_PD325901_60min_R1 1 SSPVKKPSLLK 11 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 S(0.415)S(0.585)PVKKPSLLK 53.754 0.0041545 42364000.0 4409.4 4239.4 4297.6 3910.8 5346.0 4577.7 4594.1 4214.7 4539.6 5172.0 4546.3 True False 4857.039041971286 4596.669116175594 4589.260979568193 4152.361233928782 4970.515402698787 4540.420728931596 4768.930989487979 4130.634502131813 4348.816398884243 4845.439037340961 3987.1339213701854 1.2181780541502745 1.1528755258353451 1.1510175153562652 1.0414401211037867 1.2466386885220702 1.1387680520576227 1.1960799620819176 1.035990910662041 1.090712397588533 1.215268694981737 1.0 11.96113634860075 -9.372891333075886 0.35981282579379037 0.9875642627056485 1.1720382682977948 0.0 0.08502293527521589 0.7611226609781213 0.24572045010688445 0.05345660103880173 0.028391910895104802 4.23748981069037e-10 9.372891333075886 0.18447400559214633 SS(ph)PVKVGEK ddPTM_A549_MK2206_60min_R1 3 SSPVKVGEK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 S(0.129)S(0.871)PVKVGEK;S(0.177)S(0.823)PVKVGEK;S(0.12)S(0.88)PVKVGEK 130.01 4.1428000000000004e-05 138671400.0 10668.1 11291.199999999999 11453.099999999999 9991.1 14349.2 10770.599999999999 10866.8 10464.0 15272.599999999999 12954.300000000001 14991.3 True False 12468.614469996397 11865.873851385448 13077.321798974 12438.919948517518 12238.451688270301 11910.337743054351 12841.156897862431 11947.30404465601 11813.380485330643 10027.914632847913 11268.546471168318 1.1064971424574208 1.0530083788308857 1.1605154074159973 1.1038619737109587 1.0860719010729183 1.056954219741483 1.1395575224114123 1.060234705090347 1.0483499815665078 0.8899031173634786 1.0 13.46001381395246 -9.163498261713295 0.5604013638965923 1.00375936888302 1.1035784155909798 0.5507579508956724 0.04684883732837351 0.35052579011616136 0.2526813153452631 0.012602668091274237 0.009088685287701702 6.862806252805886e-10 9.163498261713295 0.09981904670795982 SS(ph)PVLQHK ddPTM_A549_MK2206_60min_R1 1 SSPVLQHK 8 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.203)S(0.797)PVLQHK 137.46 0.00033444 183070000.0 3416.2 3968.0 3089.7 4127.2 5329.3 4048.4 4339.4 4800.9 6160.6 7029.0 5900.0 True False 3992.771041928902 4169.954251301674 3527.865919470709 5138.364185277052 4545.367029681021 4476.799000889573 5127.812809896587 5481.442277139621 4765.233936456658 5441.144018147486 4434.867168283811 0.900313558539795 0.9402658733779726 0.7954840101413702 1.1586286556730123 1.0249161603277446 1.0094550368736273 1.1562494693343723 1.2359879268403906 1.0744930469474896 1.226901237777789 1.0 12.114675178697311 -6.260199300740826 24.999480912458598 1.0629141996285103 0.8848456207474003 0.5121122186279636 0.09264260301989402 75.66041338449914 1525258.109153212 0.011985461468805726 0.029886871147808455 5.492887436072017e-07 6.260199300740826 -0.17806857888111005 SS(ph)PVNRPSSATNK ddPTM_A549_MK2206_60min_R1 2 SSPVNRPSSATNK 13 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 S(0.18)S(0.819)PVNRPS(0.001)SATNK;S(0.14)S(0.86)PVNRPSSATNK 101.39 3.9954000000000004e-05 96824000.0 4393.8 6166.8 5080.6 4704.6 7349.8 5008.6 5112.3 5321.3 7747.299999999999 8619.3 8452.3 True False 5135.366021903635 6480.66377946753 5801.105476409651 5857.227211197523 6268.654156221189 5538.606727560398 6041.138735316939 6075.610570797785 5992.548919895897 6672.1941436361685 6353.36063838733 0.8082912830220105 1.0200371344121453 0.9130766859603522 0.921910079495229 0.9866674525519076 0.8717601664378775 0.9508572044243907 0.9562829684322711 0.9432093125154284 1.050183442023176 1.0 12.633304198408993 -14.999999999766711 0.13220920998929517 1.2351908919804784 0.9045780105102575 0.3175768460603391 0.05408895454956514 78.3734794933155 0.7061478112320373 4.840011525207676 0.13264746462023022 1.0000000005371676e-15 14.999999999766711 -0.33061288147022083 SS(ph)PVNRPSSATNK ddPTM_A549_PD325901_60min_R1 1 SSPVNRPSSATNK 13 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 S(0.16)S(0.84)PVNRPSSATNK 90.412 0.00015362 3892700.0 1504.1 1575.3 1420.5 1325.3 2110.9 1542.4 1684.2 1749.9 1629.4 2175.7 1595.1 True False 1656.7951247401031 1708.0560595158317 1516.9036721604195 1407.1607710253177 1962.637666209665 1529.8392057810902 1748.2931526296022 1714.996871730006 1560.9219843911321 2038.3259306927143 1398.9128121720037 1.1843448071418416 1.2209882164592094 1.0843446846449414 1.005895977777563 1.4029735442642786 1.0935915322741274 1.2497513336196684 1.2259497924443472 1.115810771628853 1.4570786062985115 1.0 10.45009033339291 -9.671756926193412 0.903427475298905 1.0175330003370442 1.1803452528726752 0.0 0.16536004077509553 0.4314564628631505 0.7378122114137762 0.03188429107079609 0.019885725929241847 2.1293304948081282e-10 9.671756926193412 0.16281225253563103 SS(ph)PVPPVPER ddPTM_A549_MK2206_60min_R1 1 SSPVPPVPER 10 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 S(0.351)S(0.649)PVPPVPER 170.89 1.8173999999999998e-10 49774000.0 4309.7 4940.0 4730.6 4325.1 5088.3 4173.2 3791.8 4420.1 6370.2 6575.8 6520.9 True False 5037.071997951224 5191.424899553999 5401.470213499092 5384.749694161119 4339.81781043025 4614.805254054035 4480.720978145804 5046.662710988531 4927.359871119077 5090.322212908554 4901.5805623155775 1.0276423969601427 1.0591328314517174 1.1019853993682722 1.0985741488286964 0.8853915089748228 0.9414932990255563 0.9141379849174706 1.0295990541884341 1.0052593869417747 1.03850628347192 1.0 12.25903131995676 -6.71503710948997 24.999887746595334 0.9863798746864542 1.073080258854118 0.47132884350658055 0.0489006371341295 97.07547431153355 52300.28152877926 0.007104096140028895 0.014788315384569798 1.927360217544356e-07 6.71503710948997 0.08670038416766379 SS(ph)PVPVSDTQK ddPTM_A549_MK2206_60min_R1 2 SSPVPVSDTQK 11 0 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4;F5GWN9 F8WE42 NOL8 Nucleolar protein 8 1 S(0.136)S(0.864)PVPVSDTQK;S(0.165)S(0.835)PVPVSDTQK 161.99 1.7313e-13 7947500.0 5573.2 6253.700000000001 5983.9 5256.3 7599.5 6048.5 5889.5 5298.799999999999 9122.0 7344.3 8733.1 True False 6513.81990834206 6571.986618287622 6832.506999229955 6544.093735964274 6481.623616996777 6688.548255330646 6959.545915077189 6049.921126894421 7055.881564840705 5685.217529162126 6564.430248701584 0.9922902158386809 1.0011511082149944 1.040837778812776 0.9969020140413051 0.9873855569230573 1.018907658688827 1.0601903975525915 0.9216216636761537 1.0748657990899253 0.8660641234304588 1.0 12.680454084349485 SS(ph)PVRR ddPTM_A549_MK2206_60min_R1 1 SSPVRR 6 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.047)S(0.953)PVRR 60.508 0.051227999999999996 94160000.0 2158.8 1934.7 1275.4 922.74 1508.5 1516.6 1531.7 2076.8 1819.1 2609.0 2831.0 True False 2523.1526624073867 2033.1679662281636 1456.270898046071 1148.811341423373 1286.6016482978669 1677.0856053623968 1809.9900633540592 2371.192759933258 1407.0767545057788 2019.625087970805 2127.9845683748254 1.185700638954519 0.9554430029447654 0.6843427906802197 0.539858868572876 0.6046104221895107 0.7881098529972954 0.8505654083461595 1.114290392502317 0.6612250743812419 0.9490788222741784 1.0 11.055271973466493 -11.103042774829278 1.4280441782889457 1.0004605202274022 0.7943088707377154 0.07161754543865362 0.19472376947355374 0.7617526803390989 2.7667866205810654 0.1496026370987871 0.032244547378153084 7.88782424494236e-12 11.103042774829278 -0.20615164948968678 SS(ph)PVTVNQTDKEKEK ddPTM_A549_PD325901_60min_R1 1 SSPVTVNQTDKEKEK 15 2 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.174)S(0.825)PVTVNQTDKEKEK 60.528 0.0011427 9792300.0 1458.1 1672.8 1506.0 1726.0 2003.0 1715.3 2116.0 1614.6 1980.6 2150.9 2364.8 True False 1606.1252386035128 1813.7727266921108 1608.2062163136866 1832.611099969591 1862.3161899748718 1701.3311655059013 2196.5255379196296 1582.3955363708035 1897.3622697220317 2015.09180692511 2073.9445917023113 0.7744301583704276 0.874552162072638 0.77543354954997 0.8836355162532902 0.8979585073901453 0.82033588183252 1.059105217520157 0.7629883376353656 0.9148567793533291 0.9716227786351349 1.0 11.018161635735064 -12.383644859851502 0.022968681164583827 2.013398612377843 1.6170721914350096e-06 0.34824021911942316 0.07522678865424247 714.5518360548551 2.15227994815866 114.69799376862953 77.08367257023717 4.133854057645104e-13 12.383644859851502 -2.013396995305652 SS(ph)PVVNDGVVR ddPTM_A549_MK2206_60min_R1 1 SSPVVNDGVVR 11 0 H0Y8R1;F5H5I6;H0YAK1;Q12849-5;Q12849;H0YAM1 H0Y8R1 GRSF1 G-rich sequence factor 1 1 S(0.127)S(0.873)PVVNDGVVR 82.171 0.00072027 5347100.0 260.38 415.66 375.47 272.89 679.25 446.83 513.55 617.16 428.12 733.59 712.21 True False 304.3257783201941 436.81531857259426 428.7172919000768 339.7480622504975 579.3332247970338 494.1132540182511 606.855387501128 704.6443199732321 331.15150356715634 567.871509499618 535.3486010039683 0.5684628254365015 0.8159455684640079 0.8008189263894219 0.6346295882969518 1.0821607149258985 0.9229747739914025 1.1335705115565058 1.3162345407306089 0.6185717174680758 1.0607508984513228 1.0 9.064334821774898 -4.622521262361539 0.7848771772159789 0.890684833452005 1.1625593449220908e-10 0.20245435540882772 0.2039204869688018 9.575019595803916 2.0905734449669158 0.036213947664692575 9.464933619246983 2.3849470294239656e-05 4.622521262361539 -0.8906848333357491 SS(ph)PYRER ddPTM_A549_MK2206_60min_R1 1 SSPYRER 7 1 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 S(0.053)S(0.945)PY(0.003)RER 49.715 0.044808999999999995 15077000.0 1036.3 1269.7 950.11 807.98 1132.3 1109.7 768.08 968.64 1395.7 1282.0 1510.9 True False 1211.2021048975232 1334.322306672817 1084.849884696999 1005.9351362716006 965.7401699487397 1227.1277174407571 907.6301938114428 1105.947686335588 1079.5761784749147 992.3953096123317 1135.7018312813582 1.0664789573606495 1.1748878710245318 0.9552242101018844 0.8857387639647036 0.8503465816015645 1.080501663060847 0.799180003775645 0.9738010945071737 0.9505806442672373 0.873816773274601 1.0 10.149368402079464 -5.7732661604956075 24.863670785596206 0.9555732643988201 1.1206834031449835 0.43062263798608036 0.0802874872745251 123.11817305132932 258835.73795359378 0.010092922526407476 0.03174241400267849 1.6855197259064587e-06 5.7732661604956075 0.16511013874616343 SS(ph)PYRER ddPTM_A549_PD325901_60min_R1 3 SSPYRER 7 1 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7C3H4;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 S(0.006)S(0.994)PYRER;S(0.022)S(0.978)PYRER;S(0.209)S(0.791)PYRER 72.038 0.016665 104108000.0 3480.67 3161.1 3033.7000000000003 3300.4799999999996 3112.51 3339.48 3361.9 3630.7999999999997 3455.3 3698.8999999999996 4195.0 True False 3834.0250560661725 3427.4969908814137 3239.585125120076 3504.3431536660682 2893.898035176579 3312.2843820810654 3489.8389442022685 3558.3808456925 3310.0857571294214 3465.3508227417756 3679.041594296005 1.0421260422851577 0.9316276815666921 0.8805513724396965 0.9525152308957883 0.7865901923107599 0.9003117516302178 0.9485728428873769 0.9672032116215871 0.8997141435588515 0.9419167285617167 1.0 11.84511427180346 -10.903320763503528 0.8397704149968885 1.0072671516317357 0.9185638940433599 0.046875012538481364 0.062180655715352605 1.0277835881796842 1.101987878002614 0.06299539427593173 0.010809269118982633 1.2493359482541485e-11 10.903320763503528 -0.08870325758837583 SS(ph)QKSPELGK ddPTM_A549_PD325901_60min_R1 1 SSQKSPELGK 10 1 Q9UEG4 Q9UEG4 ZNF629 Zinc finger protein 629 1 S(0.377)S(0.441)QKS(0.182)PELGK 56.783 0.012044 6616900.0 2236.7 2011.7 1702.7 2070.5 2313.8 2093.3 2288.0 2281.6 2243.1 2340.4 2286.2 True False 2463.768137428487 2181.233019061763 1818.2554611668756 2198.390082553325 2151.286670176664 2076.2528588314026 2375.07109204164 2236.091698119425 2148.830307590371 2192.626744584837 2005.0118934158593 1.2288047494975518 1.087890314378975 0.9068551997809778 1.0964474025179047 1.072954568120592 1.0355314428056448 1.1845670840362574 1.1152510892640564 1.0717294568908986 1.0935729367915847 1.0 10.969395079208212 -10.180623762378508 0.908682512748017 1.0055031758243256 1.0844094466467575 0.0 0.08194744888545619 0.8096696842618417 1.3214790788067234 0.034827609576798736 0.01499125189181774 6.597451976348512e-11 10.180623762378508 0.07890627082243196 SS(ph)QSSSQQFSGIGR ddPTM_A549_PD325901_60min_R1 1 SSQSSSQQFSGIGR 14 0 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 S(0.048)S(0.951)QS(0.001)SSQQFSGIGR 119.63 2.5484e-06 6397600.0 4432.3 4013.2 4521.6 4704.8 5405.2 4437.6 4518.5 4560.9 4442.2 4941.7 4681.4 True False 4882.263833113198 4351.406448326624 4828.462966589617 4995.404810623947 5025.5573989277 4401.461656881592 4690.453990118073 4469.929271543168 4255.509782166619 4629.680218644204 4105.617477839644 1.1891667598030153 1.0598665052975935 1.1760625515288703 1.216724363043316 1.224068590426043 1.0720583884491888 1.1424478815757009 1.0887349578157055 1.0365090769259504 1.12764529175775 1.0 12.003383501847612 -8.479382745776405 0.8936633425845026 1.009896672236828 1.163326780903749 0.31424924290623246 0.05956985495679491 0.23779888551304668 0.3759268180649967 0.01064389067502227 0.012749988818005112 3.3160208625393345e-09 8.479382745776405 0.15343010866692097 SS(ph)RS(ph)SPELTR ddPTM_A549_PD325901_60min_R1 1 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.418)S(0.565)RS(0.651)S(0.34)PELT(0.027)R 69.795 0.00099805 98614000.0 2010.2 2325.1 2190.5 2046.7 2586.6 1948.0 2366.8 2643.7 2917.3 3126.2 2945.7 True False 2214.2740241689753 2521.0443369391587 2339.1605025465688 2173.120010607046 2404.9261392855738 1932.1361338573408 2456.8698691626555 2590.969329557471 2794.6960261840263 2928.8111984793695 2583.397574330808 0.8571170175936049 0.9758638631501383 0.9054589683713297 0.8411868278423856 0.930916001153456 0.7479050662025309 0.951022751424187 1.0029309291383943 1.0817909151702878 1.1337051747592648 1.0 11.335053970075988 -8.173045012178129 3.1545372035520534 1.0377998165807316 0.8817511569030906 0.6129145593052014 0.06517241196224277 0.13441483937060617 2.593722378906433 0.009830914877535062 0.012827477889211068 6.713592667114195e-09 8.173045012178129 -0.15604865967764103 SS(ph)RSS(ph)PELTR ddPTM_A549_MK2206_60min_R1 2 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.403)S(0.57)RS(0.074)S(0.951)PELT(0.002)R;S(0.388)S(0.483)RS(0.27)S(0.85)PELT(0.009)R 75.378 0.00045062 186308000.0 5011.4 5285.4 4382.4 3951.4 6166.4 4373.3 3896.1000000000004 3627.8 6112.0 6683.799999999999 5937.2 True False 5857.201803033336 5554.404284231318 5003.890217654932 4919.493177385084 5259.330728580683 4836.079703238404 4603.970938064734 4142.051759671547 4727.641758858402 5173.924937899299 4462.8293816160385 1.3124413465505105 1.244592568811136 1.121237177084948 1.1023260709114724 1.1784745234146108 1.0836353554451164 1.0316260256397223 0.9281223648688236 1.059337329437961 1.1593373834125305 1.0 12.12374293664696 -2.0000000000000004 0.3065376054446016 1.0122861181276077 3.808503048183643 0.6233932342792249 0.06435782658386188 15.649772129923285 0.195721019619716 0.01601556001531412 24.583995623550354 0.00999999999999999 2.0000000000000004 2.796216930056035 SS(ph)RSS(ph)PELTR ddPTM_A549_PD325901_60min_R1 1 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.428)S(0.563)RS(0.048)S(0.96)PELT(0.001)R 66.78399999999999 0.0014269999999999999 115520000.0 1816.7 1922.0 2032.0 1824.8 2162.8 2283.4 1926.9 2067.1 2053.1 2439.7 2653.3 True False 2001.1300466161447 2083.9736852595856 2169.9037394086395 1937.5137515785095 2010.8923892549446 2264.804747458856 2000.2292339401395 2025.8700688914191 1966.8153468475725 2285.6569256381918 2326.960920654492 0.8599757859505854 0.8955774318175647 0.9325054495536274 0.8326369963418017 0.8641711046395019 0.9732886905646213 0.8595886661377818 0.8706076887280142 0.8452292126566426 0.9822498114817146 1.0 11.184231266762724 -10.866979805142455 1.0771292522813387 1.0010212951461726 0.8806190887856837 0.5412967297689031 0.03880454975410559 0.3094204183245627 0.6285190125514264 0.02840068071229209 0.0066474061516761905 1.3583766101443334e-11 10.866979805142455 -0.12040220636048882 SS(ph)S(ph)VPHPFQVT(ph)LLR ddPTM_A549_PD325901_60min_R1 1 SSSVPHPFQVTLLR 14 0 Q5VV41;Q5VV41-2 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 3 S(0.469)S(0.548)S(0.986)VPHPFQVT(0.997)LLR 42.317 0.041498 4832600.0 0.0 307.24 292.76 256.53 249.52 0.0 291.72 268.12 165.22 303.98 345.78 True False 0.0 333.13219305887367 312.6284541088944 272.3752754780991 231.99457599726915 0.0 302.82156423530927 262.77213626392904 158.27637796802682 284.78665092244853 303.2512520800171 0.0 1.098535260032404 1.030922220319153 0.8981835148572745 0.765024297199123 0.0 0.9985830632462007 0.8665162450659658 0.5219314904139732 0.9391112121354196 1.0 8.244369791809389 -11.040622119155431 1.3295127769528168 1.0004934574096664 0.6897626025342325 0.08289542898831592 0.36198667052560496 0.9075506637489553 2.8519969065518658 0.25288780068308225 0.05621208246297872 9.107053352561733e-12 11.040622119155431 -0.31073085487543395 SS(ph)SDNNTNTLGR ddPTM_A549_PD325901_60min_R1 1 SSSDNNTNTLGR 12 0 A0A087X2H1;Q9ULT8;H0YJP0;H0YJ72 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 S(0.185)S(0.776)S(0.036)DNNT(0.003)NT(0.001)LGR 66.393 0.0053479999999999995 4886200.0 724.15 561.84 510.15 868.02 631.57 517.36 723.63 673.71 820.38 842.68 816.48 True False 797.6651749089453 609.1882285776518 544.7718467811603 921.6356239835477 587.2107019982179 513.1467916901613 751.16813563553 660.2723255347292 785.9022815482982 789.4730409873315 716.0581360931591 1.1139670575646796 0.8507524708837279 0.7607927615395261 1.2870960855385671 0.8200600934472475 0.7166272762291482 1.0490323309974976 0.9220931824575036 1.0975397693771227 1.1025264586681844 1.0 9.483932913086091 -8.748724663756914 24.822171001171483 1.0460604470237571 0.9348541457907421 0.108408491949055 0.15825368795053246 373.2719712744519 728715.5278757749 0.025819735293425503 0.029180816038560577 1.7835091273585296e-09 8.748724663756914 -0.111206301233015 SS(ph)SDS(ph)DDEEKKHEK ddPTM_A549_PD325901_60min_R1 1 SSSDSDDEEKKHEK 14 2 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 2 S(0.318)S(0.363)S(0.362)DS(0.957)DDEEKKHEK 54.974 0.005345600000000001 8626000.0 1963.7 1589.2 1664.4 1564.2 2133.3 1441.0 1509.4 1907.5 1840.6 1818.7 1962.0 True False 2163.053378400465 1723.127461297885 1777.3561928502666 1660.8170814440525 1983.4643674854694 1429.2649737620281 1566.8410429753721 1869.4534160951978 1763.2459828589162 1703.8669716187162 1720.6864381427326 1.2570874800031624 1.0014186333436714 1.0329343879578095 0.9652061204345275 1.1527169178054155 0.8306365076630361 0.9105906853468215 1.086457924381063 1.0247340501864601 0.9902251414603053 1.0 10.748768502695514 -5.260826236550614 24.023858046105623 1.005681855371488 1.2570876160395874 0.45825452245873066 0.0802612941312856 19.123595902395966 748970.4775010857 0.01015949652935915 0.08353307616207027 5.4849637723729625e-06 5.260826236550614 0.2514057606680995 SS(ph)SESLIFSGNQGR ddPTM_A549_PD325901_60min_R1 2 SSSESLIFSGNQGR 14 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 S(0.157)S(0.683)S(0.157)ES(0.004)LIFSGNQGR;S(0.211)S(0.786)S(0.003)ESLIFSGNQGR 134.06 6.2264e-09 6247500.0 4987.200000000001 5002.7 6121.200000000001 5444.7 6281.4 5687.1 5543.9 5594.1 5795.4 5834.9 6036.9 True False 5493.4968726174075 5424.295085977176 6536.62144176583 5781.006753189128 5840.216133653604 5640.786143151997 5754.8761482384825 5482.521287013451 5551.83949204638 5466.483418209738 5294.39957106211 1.0376052655042347 1.0245345129644243 1.234629414351988 1.091909795548242 1.1030931940941506 1.0654250906907652 1.0869742774408686 1.035532209729611 1.0486249512393007 1.032502995823775 1.0 12.370251364541943 -8.806813481785492 0.5262251398274053 1.0073392981300628 1.101071433927913 0.24710772151912186 0.05235458350566489 0.6846401348936424 0.44002373954549834 0.019909268479276036 0.018612910568525886 1.5602224340213302e-09 8.806813481785492 0.09373213579785022 SS(ph)SFGR ddPTM_A549_PD325901_60min_R1 1 SSSFGR 6 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 S(0.071)S(0.771)S(0.158)FGR 71.134 0.049901999999999995 8012500.0 3231.0 2800.9 3246.7 3441.0 3352.1 3149.9 3182.1 3431.4 3017.3 3291.5 3507.6 True False 3559.0087414635136 3036.9416727594066 3467.040585993127 3653.5427549219953 3116.6600601172086 3124.248258746017 3303.1965568119317 3362.958035118775 2890.4933739433945 3083.6741282690955 3076.1874365083813 1.156954449272167 0.987242076577258 1.1270576509240227 1.187685350886466 1.013156748229479 1.0156235025431959 1.0737956073838 1.093222732531504 0.9396349974123299 1.0024337566924113 1.0 11.58692769611612 -8.755698468018466 24.997810825350495 0.9714943027699198 1.0789591844581135 0.35495681065765705 0.06029206296098754 102.56513571267756 446602.2829263427 0.010280068314091199 0.011502349326379007 1.7550986492488506e-09 8.755698468018466 0.10746488168819368 SS(ph)SFREMDGQPER ddPTM_A549_MK2206_60min_R1 2 SSSFREMDGQPER 13 1 P00519;P00519-2 P00519 ABL1 Tyrosine-protein kinase ABL1 1 S(0.315)S(0.343)S(0.343)FREMDGQPER;S(0.315)S(0.343)S(0.343)FREMDGQPER 42.647 0.018488 16563300.0 3215.9 3537.3 3051.6000000000004 3054.4 4167.8 2872.6000000000004 2655.0 2933.6000000000004 4254.8 5056.799999999999 4759.8 True False 3758.6652987937323 3717.3334609701133 3484.362766565302 3802.728137117228 3554.722141051276 3176.5766253224438 3137.3791331233465 3349.446783773208 3291.0945935194277 3914.4653678998725 3577.8102962029293 1.0505490754450402 1.0389968034122037 0.9738813626488801 1.0628646636611785 0.9935468475854753 0.8878549622079437 0.876899240983513 0.9361722692027357 0.9198627990456095 1.094095282819838 1.0 11.804861179043847 -7.005480246792837 23.65290790269358 0.9470956602872879 1.0280103548938997 0.278722310182567 0.059144792745498574 98.3988375429833 424700.24230780744 0.0069893857396801555 0.012919712177424129 9.874605478284069e-08 7.005480246792837 0.08091469460661183 SS(ph)SFSLPSR ddPTM_A549_MK2206_60min_R1 2 SSSFSLPSR 9 0 Q14153-2;Q14153 Q14153-2 FAM53B Protein FAM53B 1 S(0.062)S(0.667)S(0.271)FSLPSR;S(0.079)S(0.612)S(0.305)FS(0.004)LPSR 105.86 0.00055071 21530000.0 2752.8 3433.6 2814.0 3080.2 4050.4 2974.2 3270.1 3256.5 4495.299999999999 3935.2000000000003 4869.200000000001 True False 3217.40534050169 3608.3555739086287 3213.0675138008814 3834.8491382754314 3454.5915255324353 3288.9278698858216 3864.234841139982 3718.118847612986 3477.1217275190097 3046.2355868849054 3660.043256916531 0.8790621079195251 0.9858778491455734 0.877876923374886 1.0477606052957333 0.9438663105973283 0.8986035516576484 1.055789390968968 1.0158674601964628 0.9500220307364272 0.8322949684073574 1.0 11.837644984037574 -7.735523916602874 24.999611766100518 0.9848008249765049 0.9433874679175092 0.03025629478045677 0.06995943210904783 367.9494954194134 354945.46399658325 0.007925918935067743 0.01175377051885801 1.8385527019544162e-08 7.735523916602874 -0.04141335705899574 SS(ph)SKESLVR ddPTM_A549_PD325901_60min_R1 1 SSSKESLVR 9 1 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 S(0.103)S(0.511)S(0.385)KES(0.001)LVR 59.367 0.0026343000000000004 15340000.0 2732.2 2729.1 2640.9 2664.3 3059.6 2797.3 3065.7 3115.2 3097.2 2818.4 3140.6 True False 3009.5709326606657 2959.090834777284 2820.12735502179 2828.8677599356793 2844.7042510469887 2774.51971624186 3182.36689111541 3053.064892172875 2967.035454803128 2640.4457430088473 2754.326109903704 1.0926705163339883 1.0743429487660554 1.0238901431756702 1.027063480160881 1.0328131592037388 1.0073315960174598 1.1554067180616716 1.1084616600753987 1.077227363940162 0.9586540001616446 1.0 11.427483668131954 -10.71527388039737 1.0684636688732028 1.0014719127323535 1.0655749823104066 0.35058982584656995 0.043359650485498155 0.5872365201309079 1.2317146379373263 0.0266923851525766 0.0076050667306542625 1.9263097357318047e-11 10.71527388039737 0.06410306957805312 SS(ph)SKGSVEEIMSQPK ddPTM_A549_MK2206_60min_R1 1 SSSKGSVEEIMSQPK 15 1 Q8IWB9;A0A087WVA8;Q8IWB9-2;J3KRZ8 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 S(0.055)S(0.463)S(0.463)KGS(0.018)VEEIMSQPK 147.53 2.7349000000000002e-14 10322000.0 2854.1 3367.6 3043.5 3126.4 4504.6 3605.4 3028.1 3389.1 4732.8 5167.9 5314.5 True False 3335.802303954475 3538.99645581742 3475.114064766517 3892.368140349429 3841.9793072075363 3986.9210349291734 3578.266573638721 3869.515303683453 3660.8283567285785 4000.467800737572 3994.762977261747 0.8350438619116863 0.885908995342513 0.8699174605719839 0.9743677315787818 0.9617540087049326 0.9980369442749896 0.8957393953048705 0.9686470325545706 0.916406900125507 1.001428075585034 1.0 11.963894190400215 -6.253553160012764 23.02406561320497 0.9591988740483738 0.8658519631237056 0.6373081239950855 0.03372149942397617 114.59157151145467 334549.49024912174 0.0051221892648538846 0.013251334610858466 5.577593251797231e-07 6.253553160012764 -0.09334691092466818 SS(ph)SKGSVEEIMSQPK ddPTM_A549_PD325901_60min_R1 1 SSSKGSVEEIMSQPK 15 1 Q8IWB9;A0A087WVA8;Q8IWB9-2;J3KRZ8 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 S(0.096)S(0.51)S(0.383)KGS(0.011)VEEIMSQPK 156.73 5.0025000000000006e-20 8122500.0 3274.5 4004.8 3916.8 3893.6 4426.0 4120.4 4027.2 4141.8 4917.0 4517.8 4445.8 True False 3606.924829440508 4342.298550846825 4182.617601631772 4134.098828992813 4115.133028871083 4086.8448285142645 4180.457299768396 4059.188549820757 4710.3555893280945 4232.54533698743 3898.994784248194 0.9250909603706989 1.1136969375772348 1.0727425485485143 1.0602986302250086 1.0554343507962822 1.0481790960647033 1.0721884821845111 1.0410859143027686 1.2080948680305423 1.0855478325046162 1.0 11.92888650948117 SS(ph)SLCR ddPTM_A549_MK2206_60min_R1 1 SSSLCR 6 0 A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2;H7C5K2;H7C5C6;H7C5A5;Q9P246-3 A0A1X7SBY3 STIM2 Stromal interaction molecule 2 1 S(0.102)S(0.449)S(0.449)LCR 69.176 0.052451 6615800.0 911.49 859.24 653.53 696.25 920.23 780.8 905.66 621.82 1070.2 922.59 899.8 True False 1065.3272282090545 902.9716458892268 746.2103810569613 866.8312812558497 784.86538602131 863.4237377469066 1070.2066989470773 709.9648892438831 827.8014087582237 714.1762782334173 676.3548267833514 1.5751010949025104 1.33505611275613 1.1032824066708196 1.2816220819748971 1.1604343680875606 1.2765839815962112 1.5823154601214722 1.0496929438951097 1.223915873706603 1.0559195409751703 1.0 9.40163649625243 -14.999999999936266 0.12245122427388273 0.02248939521349934 1.420932936097223 0.33465696273077594 0.15448404240476196 66.09110603739109 0.5612856730395065 15.806759040872354 0.5486726260714099 1.0000000001467527e-15 14.999999999936266 1.3984435408837237 SS(ph)SLGNLKK ddPTM_A549_MK2206_60min_R1 1 SSSLGNLKK 9 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.049)S(0.517)S(0.435)LGNLKK 76.533 0.00083028 536810000.0 4321.2 5301.5 4754.1 4318.3 6891.3 4714.5 4655.3 4517.6 5881.1 6162.4 5607.8 True False 5050.51291680322 5571.323705462659 5428.302866865942 5376.283693855857 5877.59889884991 5213.385260768179 5501.107750820756 5157.983634569759 4549.040240186874 4770.309560027326 4215.228492593555 1.1981587535948093 1.321713334224196 1.2877837764675966 1.2754430046443166 1.394372549240748 1.2367977844922178 1.3050556477511432 1.2236545761713011 1.0791918512080305 1.131684692397835 1.0 12.041395121332883 -8.758262819398473 1.5325794043133432 1.0273866056407202 1.294099096862026 0.7224743172300274 0.0577851282006479 0.09043574891560001 0.4167563507050374 0.009361615321807515 0.010046012362751393 1.744765963768472e-09 8.758262819398473 0.2667124912213059 SS(ph)SLNRR ddPTM_A549_PD325901_60min_R1 1 SSSLNRR 7 1 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 S(0.006)S(0.828)S(0.166)LNRR 52.937 0.019287000000000002 60139000.0 2031.1 1944.1 1468.9 1144.6 1645.7 1219.5 1238.5 1438.6 1592.8 1557.9 2648.6 True False 2237.2957767832067 2107.936129819544 1568.5883872132629 1215.2993424247927 1530.1117093567877 1209.568796323937 1285.631795233205 1409.9059944401329 1525.8601551112042 1459.5339281271226 2322.8389908587365 0.9631729902881021 0.9074826701786401 0.6752893305934077 0.5231956873496021 0.658724825688894 0.5207286433041871 0.5534743476808595 0.6069753435294717 0.6568944989799336 0.6283405495908021 1.0 11.181673440900921 -10.553979052880411 0.8712493567553959 0.9983480805864975 0.6672097925083981 0.0 0.17346752998637224 0.47283923392792476 0.647166301611237 0.09734379625656113 0.027758490566910075 2.792678535927136e-11 10.553979052880411 -0.3311382880780994 SS(ph)SMADR ddPTM_A549_MK2206_60min_R1 1 SSSMADR 7 0 O95816 O95816 BAG2 BAG family molecular chaperone regulator 2 1 S(0.17)S(0.415)S(0.415)MADR 57.722 0.012237999999999999 61101000.0 3880.8 3396.7 2433.2 1714.9 5678.9 4597.3 3633.5 3942.5 4613.4 4315.9 4008.8 True False 4535.784163549465 3569.577521521269 2778.264347754194 2135.050576984787 4843.541332793342 5083.783234559242 4293.659917214189 4501.361448399875 3568.4722660859543 3340.9351924772727 3013.304322748498 1.505252599051224 1.1846057149200855 0.9219992573534959 0.7085413049277951 1.6073853862776948 1.6871124486763478 1.4249008587681748 1.4938290216549017 1.1842389230806518 1.108728105307975 1.0 11.55713066710296 -9.504052891586898 1.4034529336758066 1.0463392104179257 1.30069700921114 0.10698118552921254 0.2799365859277225 0.5995121225585059 2.4183149325562625 0.07370494547726872 0.058043215895551274 3.132904152893645e-10 9.504052891586898 0.2543577987932144 SS(ph)SNVNGGPELDR ddPTM_A549_MK2206_60min_R1 1 SSSNVNGGPELDR 13 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 S(0.032)S(0.855)S(0.113)NVNGGPELDR 125.36 2.822e-06 21033000.0 2967.9 2863.5 3374.3 2550.4 4237.1 3012.2 2095.9 2582.5 4204.7 5895.0 5343.2 True False 3468.808961811597 3009.239919002607 3852.826478968835 3175.248114491809 3613.8282028524313 3330.9490046634633 2476.697900230967 2948.577283574554 3252.3421635261666 4563.315405744694 4016.3359751820417 0.8636749971233101 0.7492500472065743 0.9592888898678863 0.7905832913661786 0.8997823451980094 0.8293501901350488 0.6166560555528998 0.7341460728869698 0.8097784108757866 1.1361886639819418 1.0 11.97166424355608 -10.444962778588712 0.9159661277925863 0.9933605777721224 0.8060096840264855 0.48606537253342474 0.09726172866189906 0.43244487706402523 0.6837039713792304 0.049028750034866675 0.016525564000266193 3.5895269753520376e-11 10.444962778588712 -0.18735089374563685 SS(ph)SPAGETEGDREPQARPGEGTAPLPPPGQK ddPTM_A549_MK2206_60min_R1 1 SSSPAGETEGDREPQARPGEGTAPLPPPGQK 31 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.081)S(0.488)S(0.431)PAGETEGDREPQARPGEGTAPLPPPGQK 130.15 2.1818999999999997e-28 105200000.0 4999.0 5866.7 6751.6 5586.9 7741.1 6289.9 6040.0 5934.8 9767.9 8810.4 9096.9 True False 5842.70898618423 6165.289971298272 7709.078403048334 6955.690750805471 6602.394444573164 6955.493043102296 7137.389816973642 6776.076074562733 7555.486246131051 6820.124520911456 6837.888668332374 0.8544609702762462 0.901636494880497 1.1274062473041733 1.017227844468814 0.9655603892982594 1.0171989309089764 1.0438002376418203 0.99096028075802 1.1049443201849738 0.9974021005192454 1.0 12.739335218262244 -5.619255711019476 6.358405161447695 1.040008420625816 0.8661447194765184 0.6034405524475466 0.04722006607516307 0.09445195752656892 5.095862657235292 0.007110074889431376 0.028320662816100965 2.402947536582211e-06 5.619255711019476 -0.1738637011492976 SS(ph)SPAPADIAQTVQEDLR ddPTM_A549_MK2206_60min_R1 1 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.318)S(0.364)S(0.318)PAPADIAQTVQEDLR 83.96799999999999 0.00012748 18726000.0 679.97 764.88 614.36 697.11 830.57 639.64 772.27 615.5 741.79 941.06 1227.4 True False 794.7323123296047 803.8091249333738 701.4854860620851 867.9019812944567 708.3942532494261 707.3262802413311 912.5814625752037 702.7490098896955 573.7757493952187 728.4738924054451 922.6027054833133 0.8614025382824749 0.8712408062062765 0.7603332202398062 0.9407104229548068 0.7678215650563562 0.7666639996148636 0.9891380733564401 0.7617027412916098 0.6219098925085433 0.7895856884831352 1.0 9.849565712810893 SS(ph)SPPILTKPTLK ddPTM_A549_MK2206_60min_R1 1 SSSPPILTKPTLK 13 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 S(0.314)S(0.342)S(0.342)PPILT(0.002)KPTLK 49.224 0.0085947 6486500.0 5323.4 6063.1 6109.8 5463.0 8132.6 5995.9 4842.3 5797.9 8665.3 8463.0 8332.5 True False 6221.8597753656995 6371.685892406049 6976.261512374064 6801.435245243385 6936.305313190079 6630.382158243701 5722.083230253552 6619.770080324069 6702.6233856406625 6551.202422191232 6263.310284699125 0.9933820124743482 1.017303247449145 1.1138297793447396 1.0859170208857232 1.1074503733489045 1.0586066882940974 0.913587698861454 1.056912364136861 1.0701407212755771 1.0459648531536765 1.0 12.612709636558355 -7.546707263963848 24.99970982443377 1.0261552250286903 1.0668377881075133 0.15352436270389147 0.051079046347509406 401.15904423538564 420874.80951639236 0.008372581135154256 0.01241880684036295 2.839832571560304e-08 7.546707263963848 0.04068256307882301 SS(ph)SPQPK ddPTM_A549_PD325901_60min_R1 1 SSSPQPK 7 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.285)S(0.466)S(0.248)PQPK 104.2 0.010162000000000001 29997000.0 7466.3 7102.0 8403.3 7773.4 8063.4 6545.5 5562.2 6350.4 6173.4 8143.4 9304.3 True False 8224.273279600447 7700.510464471164 8973.598471147943 8253.5452633277 7497.054601219858 6492.195618153607 5773.872564752626 6223.736290207572 5913.953466576787 7629.224334238666 8159.930084817242 1.0078852630003443 0.9436980935411572 1.0997151173935489 1.0114725466440753 0.9187645633348304 0.7956190250003855 0.7075884847954483 0.7627193156700883 0.7247554090666258 0.9349619733181254 1.0 12.994341075741264 -6.93861106235127 3.3551350282547214 0.8401090178292538 1.0164084194590584 0.508130181286546 0.08843615709740522 0.2294561641343721 5.27445899572122 0.017688782876294377 0.03461305121500369 1.1518314637060577e-07 6.93861106235127 0.1762994016298045 SS(ph)SPRGEASSLNGESH ddPTM_A549_MK2206_60min_R1 1 SSSPRGEASSLNGESH 16 1 Q8IY57;Q8IY57-5;Q8IY57-3 Q8IY57 YAF2 YY1-associated factor 2 1 S(0.305)S(0.343)S(0.343)PRGEAS(0.004)S(0.004)LNGESH 41.348 0.025615 9073000.0 313.94 319.47 309.72 440.51 339.38 239.41 379.67 327.15 521.8 575.27 601.87 True False 366.92539690391624 335.7296584333029 353.64295322473663 548.4349697752457 289.45765157396744 264.74420729250403 448.65112447191757 373.52451435485597 403.61313314337633 445.3161074576333 452.40906823304704 0.8110478384905051 0.7420931232535779 0.7816884719087162 1.212254590557264 0.6398139911396752 0.5851876672731232 0.9916934826797201 0.8256344547064745 0.892142004844751 0.9843217979623697 1.0 8.821484037236253 -9.514376854301023 0.5974919362127055 0.9926422995871306 0.816240107212528 0.14334950455371986 0.15912291630281875 1.025428037641814 0.8094002675836873 0.07423203296875652 0.041557407049098424 3.059307600761135e-10 9.514376854301023 -0.17640219237460253 SS(ph)SPTSYWK ddPTM_A549_PD325901_60min_R1 1 SSSPTSYWK 9 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.007)S(0.479)S(0.479)PT(0.032)S(0.002)YWK 144.65 3.3444e-05 35630000.0 5935.4 5038.7 4970.0 4856.0 4880.9 4898.8 4221.9 4520.0 6252.6 5754.6 7013.1 True False 6537.957438589457 5463.328932319189 5307.294087037864 5155.944091223828 4538.0824221908915 4858.905796991963 4382.5667148123275 4429.845054128595 5989.8249660022075 5391.253573913823 6150.533159703766 1.062990356904986 0.8882691614627967 0.86289984123807 0.83829221912075 0.7378356159304836 0.7899974962863199 0.7125507010555504 0.7202375695088447 0.9738708515947098 0.8765506069027498 1.0 12.586495760727157 -8.864902462678696 8.004904563542425 0.9884135416566554 0.8224644242623677 0.2117947040239494 0.09887043526354512 0.18536314061230555 12.960179659912674 0.016862917103565717 0.01791863131814186 1.3648896399791043e-09 8.864902462678696 -0.16594911739428775 SS(ph)SPVTELAS(ph)RSPIR ddPTM_A549_MK2206_60min_R1 1 SSSPVTELASRSPIR 15 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.301)S(0.348)S(0.348)PVT(0.005)ELAS(0.701)RS(0.298)PIR 57.36600000000001 0.0030535000000000002 36949000.0 517.56 650.91 607.48 386.0 971.54 585.46 940.54 747.06 904.58 889.77 979.91 True False 604.9114748728767 684.038538738602 693.6297986083005 480.5700173281982 828.6277529912562 647.4129886031052 1111.4239434530443 852.958042775298 699.6940743174304 688.7703390278974 736.5713028598288 0.8212531122570665 0.9286793228065472 0.9417008182577807 0.6524419502393399 1.1249796859774563 0.8789549444696589 1.5089156190823672 1.1580115047431028 0.9499339325341374 0.9351034127363661 1.0 9.524681380077395 -6.7842420878620855 24.99933337610673 1.031870728724119 0.8501859637565489 0.2787807653873041 0.17763734035666134 302.7555350340482 331919.86716832645 0.026312070808036554 0.049748715730669406 1.6434553599613914e-07 6.7842420878620855 -0.18168476496757002 SS(ph)SPVTELAS(ph)RSPIRQDR ddPTM_A549_MK2206_60min_R1 1 SSSPVTELASRSPIRQDR 18 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.3)S(0.349)S(0.349)PVT(0.001)ELAS(0.575)RS(0.425)PIRQDR 88.16799999999999 2.2686e-06 107590000.0 1003.3 1312.2 848.61 789.7 1193.2 1084.5 1023.4 861.27 1557.5 1342.8 1395.6 True False 1172.6325116700616 1378.9853751406395 968.9556584529367 983.1765354509806 1017.6818606224818 1199.261070167162 1209.3385328958311 983.3576600287537 1204.728736816421 1039.4605473848974 1049.0340033994726 1.117821260197533 1.3145287671056753 0.9236646813286928 0.9372208453347786 0.9701133207547212 1.1432051451915453 1.1528115666192704 0.9373935037778663 1.1484172418743415 0.9908740269776273 1.0 10.034845726867758 -12.256975752642964 0.006208360120589571 2.207223111871475e-05 2.0827428380888575 0.0380808869549355 0.11701605251909653 60680.11819623744 50.992129048808245 9008.188069284248 8117.302096312292 5.533810045017336e-13 12.256975752642964 2.0827207658577387 SS(ph)SQGPLSSIR ddPTM_A549_MK2206_60min_R1 1 SSSQGPLSSIR 11 0 A0A0U1RQE4 A0A0U1RQE4 1 S(0.051)S(0.475)S(0.475)QGPLSSIR 165.72 5.8569e-14 21636000.0 6615.4 6792.8 6240.6 6572.5 9410.8 7188.2 6225.4 6823.8 10247.0 10803.0 11490.0 True False 7731.917788998436 7138.524505605345 7125.6109191989235 8182.762795050734 8026.483786411381 7948.850552859014 7356.474597117167 7791.094547011053 7926.070861096543 8362.594796990657 8636.715892132366 0.8952381768215674 0.8265322831920636 0.8250370868040262 0.9474391536376504 0.9293444275182332 0.9203556828933132 0.8517675802927085 0.9020899430197034 0.9177181419521757 0.9682609572243288 1.0 13.07626711709422 -14.999999998555586 0.11850197620849626 1.3827746765638371 0.8320888159688288 0.49276385220082486 0.037949492814046186 44.361198974826145 0.36708373574972086 4.026887747814399 0.15402191537278087 1.000000003325887e-15 14.999999998555586 -0.5506858605950083 SS(ph)SSERPEPQQK ddPTM_A549_MK2206_60min_R1 1 SSSSERPEPQQK 12 1 P78362;C9J2M4 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 S(0.099)S(0.44)S(0.44)S(0.022)ERPEPQQK 63.894 0.0018852 16005000.0 1502.9 1659.4 1620.6 1605.3 2068.3 1699.1 1159.5 1265.7 2191.2 2319.4 2201.9 True False 1756.552777622781 1743.8563721295368 1850.4254487795688 1998.5985720646545 1764.055809860443 1878.8976342287017 1370.166141188897 1445.1168510436842 1694.8966986273788 1795.4459291067415 1655.1074606515472 1.0612922842673302 1.0536212382506287 1.1180092488080098 1.2075340239707995 1.0658255441408062 1.1352118692577566 0.8278411968788536 0.8731256944940612 1.0240402746780974 1.0847911521104188 1.0 10.692709174151426 SS(ph)ST(ph)RSGGGDLTLGLEPSEEEAPR ddPTM_A549_PD325901_60min_R1 2 SSSTRSGGGDLTLGLEPSEEEAPR 24 1 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 2 S(0.314)S(0.35)S(0.349)T(0.547)RS(0.438)GGGDLT(0.002)LGLEPSEEEAPR;S(0.336)S(0.367)S(0.364)T(0.507)RS(0.424)GGGDLT(0.003)LGLEPSEEEAPR 90.12299999999999 1.5028e-07 23419000.0 856.69 996.48 1262.24 969.3 800.47 1154.43 1023.9399999999999 1036.8000000000002 848.81 709.14 800.04 True False 943.6605381381542 1080.4568667468643 1347.9031968657284 1029.1714595599792 744.2477486715857 1145.0287048300463 1062.9065970214674 1016.1202106461348 813.1374675162863 664.3647793774109 701.6401518714129 1.3449352002179822 1.5399017058317892 1.921074774969198 1.4668081021517592 1.0607257105890104 1.6319315560491068 1.5148884997337817 1.4482070445027149 1.158909542658709 0.9468739461466377 1.0 9.454587499199736 -8.850539371685356 1.735071602570147 1.0565204627441862 1.5057131921618878 0.5126834977000954 0.19904440700354628 0.20876215996914252 1.2386324767846857 0.0395519098032853 0.041213292326663264 1.4107843336708382e-09 8.850539371685356 0.4491927294177016 SS(ph)STKGKLELVDNK ddPTM_A549_MK2206_60min_R1 1 SSSTKGKLELVDNK 14 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.105)S(0.437)S(0.437)T(0.022)KGKLELVDNK 68.41 0.00067721 11307000.0 3107.5 3764.5 3965.1 3594.2 4655.5 2781.7 2890.0 2215.1 4915.6 5319.3 4772.1 True False 3631.9700289192847 3956.096970520452 4527.410802761859 4474.779161349769 3970.682117103559 3076.0576476569827 3415.0755912340765 2529.0972084592436 3802.224448600192 4117.6664355857065 3587.055866740199 1.0125211772126377 1.1028813370881858 1.2621522973034218 1.2474796400136094 1.1069473865518542 0.8575438359292701 0.9520553116831123 0.7050621184658621 1.0599847311705048 1.147923698029189 1.0 11.80858449944216 -7.014929336024153 23.072192323786272 0.9849063379118037 1.1621602716663348 0.36207369876101947 0.12476744838566267 231.37780089559232 357579.5790076329 0.018190695186451073 0.032270532925014944 9.662080777404734e-08 7.014929336024153 0.17725393375453113 SS(ph)SVEEKPLSHR ddPTM_A549_PD325901_60min_R1 1 SSSVEEKPLSHR 12 1 Q06190 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B subunit alpha 1 S(0.295)S(0.352)S(0.352)VEEKPLS(0.002)HR 56.513999999999996 0.0045162 9936800.0 2258.8 2832.1 2512.2 2384.5 3179.4 2716.4 3189.0 2932.5 3171.1 3082.0 3270.3 True False 2488.1117131593264 3070.771006255815 2682.6929990858184 2531.7851494075826 2956.089912334551 2694.2785390195504 3310.3591400877604 2874.008986998254 3037.829694797301 2887.4019940225908 2868.073832139742 0.8675201054022578 1.0706736248713826 0.9353639955232187 0.8827475503023332 1.0306882198109748 0.9394034800734085 1.154209875279971 1.0020693870541275 1.059188107626543 1.0067390740315876 1.0 11.485866448133853 SS(ph)SVTSIDKESR ddPTM_A549_MK2206_60min_R1 1 SSSVTSIDKESR 12 1 H0Y332;Q5JRH0;Q5T5C0-2;Q5T5C0;Q5T5C0-3 H0Y332 STXBP5 Syntaxin-binding protein 5 1 S(0.309)S(0.341)S(0.341)VT(0.004)S(0.004)IDKESR 45.863 0.012347 6878300.0 1524.2 2036.9 2018.4 1757.6 2559.9 1607.5 1648.5 1429.5 2486.1 2640.9 3192.3 True False 1781.447696887778 2140.5695096966692 2304.6394704533386 2188.2120789016626 2183.3421010790257 1777.604583027859 1948.0111114703718 1632.1360026601465 1923.0023194859095 2044.3188558152938 2399.563807002103 0.742404803610299 0.8920660927833344 0.9604410033724594 0.9119207718154021 0.9098912455288221 0.7408032150846243 0.811818842152033 0.6801802885580512 0.8013966179496655 0.8519543634763207 1.0 11.228556461050884 -10.714373528582776 1.062736199388022 0.9963998618733654 0.8310095513008955 0.07178463730663287 0.09179111863916009 0.46120028310408223 0.9556327460176754 0.05397822105464683 0.015318629253185988 1.930307381477641e-11 10.714373528582776 -0.1653903105724699 SS(ph)TDFSELEQPR ddPTM_A549_MK2206_60min_R1 1 SSTDFSELEQPR 12 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.134)S(0.848)T(0.018)DFSELEQPR 75.479 0.0012379000000000001 948210.0 293.54 522.7 513.42 381.08 600.47 602.44 528.54 683.68 776.27 730.94 864.93 True False 343.0823756360311 549.3031973677886 586.2306762386808 474.44461710733134 512.1416584377992 666.189800932693 624.5688764674251 780.5937336821883 600.446084448464 565.8201463401226 650.1440101463926 0.527702124885807 0.8448946522542018 0.9016935741770189 0.7297531157758431 0.7877357176950388 1.024680363943809 0.9606623559091026 1.2006474281081547 0.9235585886783174 0.8702997143859207 1.0 9.344615507472891 -7.224240011906805 6.97822584645767 0.9863176572725433 0.7687659297161139 0.5076831623962629 0.1164108551732517 0.15568917612002012 23.5354408050875 0.016135776056240104 0.02784741753543206 5.967054274794043e-08 7.224240011906805 -0.21755172755642938 SS(ph)TGSYEER ddPTM_A549_MK2206_60min_R1 1 SSTGSYEER 9 0 Q7Z674;H7C434;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 S(0.208)S(0.649)T(0.141)GS(0.002)YEER 98.25399999999999 0.00083971 4123200.0 1160.4 1239.9 1195.6 972.02 1495.5 1555.4 973.27 1155.4 1545.4 1385.9 1733.5 True False 1356.2471509438258 1303.0056139589087 1365.1540581024635 1210.164943635636 1275.5139310768704 1719.991395609041 1150.100560789061 1319.1814882641013 1195.3693674966921 1072.8242274506479 1303.0241078338959 1.040845785423269 0.9999858069586925 1.0476813513234613 0.9287356514434519 0.9788874383891811 1.319999672506672 0.8826395105620495 1.012399909052385 0.9173808529788713 0.8233341355702738 1.0 10.347648060763579 SS(ph)TIPRNSNIAQNYRR ddPTM_A549_PD325901_60min_R1 1 SSTIPRNSNIAQNYRR 16 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 S(0.085)S(0.457)T(0.457)IPRNS(0.001)NIAQNYRR 45.70399999999999 0.012292 43447000.0 6316.8 6633.0 7819.3 7777.4 7452.3 8733.5 7717.4 8032.1 8728.3 6795.7 10475.0 True False 6958.076885817621 7191.986188515526 8349.96471927066 8257.792334243039 6928.876157039308 8662.37727158269 8011.089880123318 7871.893464439445 8361.479904480866 6366.618342238582 9186.641406495988 0.7574124838373988 0.782874379251375 0.9089246384828188 0.8988913324083654 0.754233876173703 0.9429319038683078 0.8720368549988875 0.8568848087259758 0.9101781091148676 0.6930300270277957 1.0 13.165321799950352 -14.999960409166757 0.023286792514627126 2.1690053772704814 4.882469097733248e-06 0.0 0.10563381359564207 816.6356783028193 1.4752737764524082 96.33133288466688 48.678079166150205 1.0000911654177585e-15 14.999960409166757 -2.1690004948013835 SS(ph)TLEPEDDDEDEEDT(ph)VTR ddPTM_A549_PD325901_60min_R1 1 SSTLEPEDDDEDEEDTVTR 19 0 Q9NVM1 Q9NVM1 EVA1B Protein eva-1 homolog B 2 S(0.356)S(0.419)T(0.226)LEPEDDDEDEEDT(0.973)VT(0.027)R 78.794 0.00049013 1068500.0 0.0 0.0 202.08 0.0 198.75 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 215.7943640057569 0.0 184.79048565027747 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SS(ph)TPLPTISSSAENTR ddPTM_A549_MK2206_60min_R1 1 SSTPLPTISSSAENTR 16 0 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 S(0.043)S(0.946)T(0.011)PLPTISSSAENTR 250.46 2.5150999999999995e-77 14075000.0 1768.3 1841.3 1381.5 1555.4 2082.4 1993.2 1675.5 1572.1 2662.7 2319.9 2336.8 True False 2066.745809215757 1935.0143051718194 1577.4174734598141 1936.4730698245596 1776.0817185386006 2204.11910102092 1979.9166619767097 1794.9499893543307 2059.602701458161 1795.8329787594764 1756.5080676009502 1.1766218711642649 1.1016256292034423 0.8980416899617552 1.1024561204944574 1.0111435018709503 1.2548300469984859 1.1271890511046114 1.0218854228240948 1.1725552187592165 1.022388118724804 1.0 10.778494487502561 -5.506688074509219 23.892084458750816 1.0785452190478544 1.157872916907947 0.09497070394104257 0.09188011796725909 834.9514104515168 1232096.395501097 0.013132824028847016 0.06570567650006646 3.1139520834428454e-06 5.506688074509219 0.07932769786009253 SS(ph)TPPRQS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.318)S(0.417)T(0.265)PPRQS(0.852)PS(0.148)R;S(0.323)S(0.406)T(0.282)PPRQS(0.881)PS(0.108)R 75.998 0.00036949 461940000.0 4523.9 4163.1 3797.5 2774.1 4314.0 3609.6 2697.2 3083.4 4682.200000000001 5700.0 5709.700000000001 True False 5287.423721264023 4374.9840079622 4336.042602579545 3453.754624534079 3679.416314721242 3991.5654761414407 3187.2463268776974 3520.481392516467 3621.6891759369796 4412.366041178073 4291.823910296624 1.2319759225393265 1.0193764001980754 1.0103030071147223 0.8047288744181905 0.8573083126485831 0.930039433017085 0.7426321287858745 0.8202762895444967 0.8438578216706639 1.02808645773939 1.0 12.06737516948128 -5.2993178376968 1.331806156822466 0.8942822004149452 1.3539427728755518 0.598215393475116 0.08447704780155195 0.7187160052091154 1.1446673833687673 0.013146460129908846 0.43663337383692474 5.019750854258407e-06 5.2993178376968 0.45966057246060654 SS(ph)TPPRQS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.38)S(0.504)T(0.116)PPRQS(0.954)PS(0.046)R 107.82 3.8287e-05 368050000.0 2225.2 2572.1 2719.2 2707.4 2993.9 2918.3 2508.7 2797.2 2825.5 3024.5 3314.0 True False 2451.1006658943397 2788.8598937857364 2903.741263877939 2874.629949048475 2783.618792394295 2894.5343323592815 2604.169951313315 2741.4076516390496 2706.7540609409275 2833.5325538356024 2906.399009176868 0.8433462364097506 0.9595585069290193 0.9990855538793755 0.9890692709335218 0.957755209661544 0.9959177398629286 0.8960125375389705 0.9432316908253605 0.9313084859974259 0.9749289567223248 1.0 11.505017063697727 -8.957859750074244 0.005592333732900574 1.9207066757977589 2.7260831850635964e-06 0.11358152055839732 0.04384429662401155 6405.062778475748 25.47533248396954 4393.316009778574 4354.670360032249 1.1018950952143482e-09 8.957859750074244 -1.920703949714574 SS(ph)TPRES(ph)PCGK ddPTM_A549_MK2206_60min_R1 1 SSTPRESPCGK 11 1 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 S(0.291)S(0.359)T(0.359)PRES(0.992)PCGK 60.157 0.026724 10710000.0 1173.1 1116.4 1165.9 916.1 1852.2 1253.3 1003.5 1135.3 1580.6 1400.5 1806.5 True False 1371.090600458636 1173.2199914700582 1331.2421515069097 1140.5445411252917 1579.7438335945026 1385.9233741267903 1185.8229604856035 1296.2322517104324 1222.5966236995414 1084.1260773105066 1357.89619313639 1.009716801172975 0.8639982919167206 0.9803710756652788 0.8399350015783814 1.1633759941146178 1.0206401499113602 0.873279538214669 0.9545886189698126 0.9003608890571072 0.7983865650337049 1.0 10.407157478993188 SS(ph)TQTLEDSWR ddPTM_A549_MK2206_60min_R1 2 SSTQTLEDSWR 11 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 S(0.02)S(0.98)TQTLEDSWR;S(0.012)S(0.859)T(0.129)QTLEDSWR 205.87 1.2637e-24 10363000.0 3988.5 3695.2 2163.17 2560.44 4701.9 3086.3 2767.0 3624.0 4249.200000000001 4323.1 4207.7 True False 4661.661290537269 3883.2698965246823 2469.940033343514 3187.747914942518 4010.2567385692687 3412.8902174798673 3269.7280833718646 4137.713098034533 3286.7629845780666 3346.508707476656 3162.8119633877604 1.473897703847072 1.227790314908643 0.7809316715426562 1.0078841081428211 1.2679402964802848 1.0790683281165543 1.0338041341760906 1.3082387274147445 1.0391901329023492 1.0580801976896956 1.0 11.626992071452605 -5.522625355752888 24.999859509770875 1.0458819563286783 1.412370959997737 0.44540238104485896 0.1338638903104562 4.644894579767566 458160.11632784683 0.018135601423668653 0.07185127826322261 3.001750863567714e-06 5.522625355752888 0.3664890036690587 SS(ph)TSGSDFDTK ddPTM_A549_MK2206_60min_R1 2 SSTSGSDFDTK 11 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 S(0.053)S(0.941)T(0.006)SGSDFDTK;S(0.016)S(0.975)T(0.009)SGSDFDTK 225.79 1.3782999999999998e-39 21433000.0 8453.0 10704.1 7916.7 8692.8 12524.1 10102.5 8786.6 9867.5 14834.7 13588.5 13117.7 True False 9879.659743991864 11248.892969092309 9039.407102525734 10822.536390234625 10681.821480574943 11171.539844503239 10383.011484407381 11266.248342951369 11474.66413614804 10518.848412376881 9860.213059897724 1.001972237716975 1.140836704111644 0.9167557584825147 1.0975966061271787 1.0833256254896526 1.1329917291482052 1.0530210068822874 1.142596845982173 1.1637338936230919 1.066797273900488 1.0 13.267403105417088 SS(ph)TSGSDFDTKK ddPTM_A549_PD325901_60min_R1 1 SSTSGSDFDTKK 12 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 S(0.439)S(0.545)T(0.011)S(0.003)GS(0.002)DFDTKK 46.282 0.016527 5095300.0 2604.0 3394.8 2579.7 3906.4 4134.3 2766.2 3150.7 3459.0 4131.8 4106.4 4619.0 True False 2868.3561630365166 3680.8917100516355 2754.7739549962916 4147.689455921903 3843.921030560716 2743.6729843306857 3270.601612629194 3390.0075314669925 3958.154814721541 3847.1212031973932 4050.8922822534564 0.7080800878370651 0.9086619573117865 0.680041275613443 1.0238952721829966 0.9489072438189828 0.6773008989526668 0.8073780749385423 0.8368545237103114 0.9771069035979582 0.9496972358537492 1.0 11.984024007325312 -8.767065892073642 4.470921150970712 0.9901091096547447 0.8264791827282576 0.29237744537065646 0.10467895225982889 0.1632355226846607 7.801363041669654 0.0175486398397866 0.019139644553855976 1.709755887645446e-09 8.767065892073642 -0.16362992692648715 SS(ph)TSSEPTPTVK ddPTM_A549_MK2206_60min_R1 1 SSTSSEPTPTVK 12 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.09)S(0.725)T(0.176)S(0.004)S(0.005)EPTPTVK 127.02 3.1476e-07 4228900.0 2150.5 2449.4 1680.4 2217.9 2490.3 2109.9 1432.7 1778.9 2772.3 2852.2 2775.2 True False 2513.4518253229026 2574.0639977667142 1918.7059879854282 2761.285599565316 2123.980168880463 2333.1682175617298 1693.0030448308166 2031.064522652768 2144.378476453395 2207.8860390610694 2086.0412483764803 1.2048907600839946 1.2339468357924614 0.9197833405637182 1.3236965480497394 1.0181870423384531 1.1184669619441048 0.8115865619380458 0.9736454273056683 1.0279655199159254 1.0584095788035919 1.0 11.026551969959765 -7.150130625101505 2.274847170061182 0.9980856610133315 1.155123064742872 0.30358929227398435 0.1178364525733609 0.2952068843577226 2.985380860575858 0.01643611027709054 0.03096414382202563 7.077328837187709e-08 7.150130625101505 0.15703740372954056 SS(ph)VGAGEPR ddPTM_A549_MK2206_60min_R1 1 SSVGAGEPR 9 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 S(0.204)S(0.796)VGAGEPR 52.725 0.023349 2858800.0 511.97 614.45 514.84 371.25 721.39 390.92 392.94 436.81 810.25 738.26 772.28 True False 598.3780195352552 645.7228804718533 587.8520535910608 462.2062666660458 615.2744866195548 432.2868949283055 464.33211170225513 498.72915517452145 626.7296687033745 571.4865532561624 580.501562156309 1.0307948480147806 1.1123533898397717 1.012662311204552 0.7962188162752776 1.0599015174637594 0.7446782629189646 0.7998808995060491 0.8591349062386002 1.0796347668305117 0.9844703106970811 1.0 9.181156139229266 -8.769203845563519 24.99874992607683 1.0376053080806658 0.925752333568326 0.1123961236112081 0.11570160342460124 247.01108752110437 795283.1476863595 0.020997364546472722 0.022556468192035647 1.7013597507389681e-09 8.769203845563519 -0.11185297451233978 SS(ph)VGAGEPR ddPTM_A549_PD325901_60min_R1 1 SSVGAGEPR 9 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 S(0.398)S(0.602)VGAGEPR 50.791000000000004 0.027397 3845100.0 1137.4 1263.0 1349.3 1455.4 1271.1 1330.2 1303.3 1248.0 1414.0 1375.5 1405.6 True False 1252.8680106903755 1369.4374424988862 1440.8716120000388 1545.29675254678 1181.822321056945 1319.3672922264047 1352.897794693126 1223.1076609629401 1354.5744973174556 1288.6506952557008 1232.7201108325305 1.0163442615081844 1.1109070343421446 1.1688554436147967 1.2535665955049176 0.9587109926021964 1.0702894198224413 1.0974898379644606 0.9922022446254256 1.0988500028628798 1.0453716816426375 1.0 10.267629557597289 -6.773129101169299 24.999992110056116 1.0441415286089264 1.1377701992360656 0.34172820787622804 0.06627069616968878 210.77614821456078 450772.65468216233 0.00997043223604257 0.018951316347305912 1.686051744306104e-07 6.773129101169299 0.0936286706271392 SS(ph)VS(ph)SVGAR ddPTM_A549_MK2206_60min_R1 1 SSVSSVGAR 9 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67;Q8N4M4;E9PRA3;E9PRP1;E9PS62;Q9BZ68 Q9BZ67-2 FRMD8;FRMD8P1 FERM domain-containing protein 8;Putative FERM domain-containing protein FRMD8P1 2 S(0.404)S(0.594)VS(0.596)S(0.406)VGAR 59.013000000000005 0.011734 5249200.0 1537.6 1431.4 1252.9 1284.6 1698.7 1087.7 1238.7 1180.4 1789.6 1883.0 2042.2 True False 1797.1092892892327 1504.252145996274 1430.5800597161067 1599.3270576678863 1448.8234802542838 1202.7996920431744 1463.755756007491 1347.72531482339 1384.2584574039595 1457.6289921997043 1535.0653781473218 1.1707053750754075 0.9799270880643296 0.931934287673585 1.0418625033404911 0.9438187460151543 0.7835494886184193 0.953546198647321 0.8779595540419044 0.9017586332867646 0.9495549915658472 1.0 10.584084385677961 SS(ph)VSS(ph)VGAR ddPTM_A549_MK2206_60min_R1 1 SSVSSVGAR 9 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67;Q8N4M4;E9PRA3;E9PRP1;E9PS62;Q9BZ68 Q9BZ67-2 FRMD8;FRMD8P1 FERM domain-containing protein 8;Putative FERM domain-containing protein FRMD8P1 2 S(0.413)S(0.583)VS(0.35)S(0.654)VGAR 53.028 0.026163 4182700.0 1501.6 1093.7 1514.0 1231.8 1535.3 1381.4 1234.3 1185.8 1908.4 2038.4 2136.2 True False 1755.0333694047297 1149.3646584295973 1728.7079658473824 1533.5910552976025 1309.459403799611 1527.5788311008923 1458.556332962013 1353.8907813601961 1476.1504470885764 1577.9240242697167 1605.7225838793001 1.0929866634650591 0.7157927963202848 1.0765919239118873 0.9550784616808257 0.8154954143050411 0.9513342132925485 0.9083488938906588 0.8431660580430412 0.9193060257783212 0.9826878192480645 1.0 10.649006948729872 -10.402969577428468 0.9385773855657712 0.9962471172119217 0.9158561318625812 0.0648910503234269 0.10260714170684614 0.9928287618200677 1.671622517732558 0.047788736489442644 0.01717835251622673 3.953943166912208e-11 10.402969577428468 -0.08039098534934053 SS(ph)VSS(ph)VGAR ddPTM_A549_PD325901_60min_R1 1 SSVSSVGAR 9 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67;Q8N4M4;E9PRA3;E9PRP1;E9PS62;Q9BZ68 Q9BZ67-2 FRMD8;FRMD8P1 FERM domain-containing protein 8;Putative FERM domain-containing protein FRMD8P1 2 S(0.423)S(0.566)VS(0.335)S(0.675)VGAR 45.306999999999995 0.05572100000000001 5956100.0 1545.2 1855.7 1506.5 1867.0 2086.1 1639.6 1634.0 2270.8 2037.6 2343.7 2510.6 True False 1702.0675664838823 2012.0863515797173 1608.7401493204302 1982.3203497353568 1939.579532654309 1626.2476412076467 1696.1827641591083 2225.5071125918626 1951.966757944871 2195.718382021656 2201.8121160046594 0.7730303390156658 0.9138319918189874 0.7306436991724801 0.9003131263227011 0.8809014713634198 0.7385951005477187 0.7703576303490188 1.0107615887908725 0.8865273943023122 0.9972324005582907 1.0 11.104475651442224 -9.596502076399949 0.3689741976163906 1.014070006458527 0.8155470486268539 0.4244320209180945 0.0765729263553026 1.0336458139387306 0.31878690929234976 0.07985533914342274 0.034525234675337683 2.5321995285842e-10 9.596502076399949 -0.19852295783167317 SS(ph)YRDR ddPTM_A549_MK2206_60min_R1 1 SSYRDR 6 1 H0Y465;P21359-2;P21359-6;P21359 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 S(0.01)S(0.99)YRDR 60.074 0.053413 17606000.0 2657.3 1509.8 989.59 878.6 1268.1 939.81 895.15 996.3 1208.4 2227.6 2044.0 True False 3105.7872752525222 1586.6423711228001 1129.92874235331 1093.8570394418534 1081.564169841912 1039.2600704046117 1057.7871679907212 1137.5285760407855 934.6993294182748 1724.38361286461 1536.418388469849 2.021446305615777 1.0326890012706567 0.7354303689886382 0.7119525824806407 0.7039515915447121 0.6764173601434388 0.6884759880049296 0.740376830020678 0.6083624984137044 1.122339869013127 1.0 10.585355420498367 -5.260917482926956 2.565531016255963 0.7709733811319407 2.288418308107937 0.8595960542372689 0.14463848256774547 0.1318312902160376 1.0908464218548755 0.02069914842702045 0.43140296917355 5.483811488573037e-06 5.260917482926956 1.5174449269759962 up SSADKIGEVSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SSADKIGEVSSPK 13 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 SSADKIGEVS(0.123)S(0.877)PK;SSADKIGEVS(0.1)S(0.9)PK 141.85 7.2091e-13 97438000.0 17690.0 23183.0 20978.0 20169.7 29435.0 18083.8 17865.699999999997 15654.9 30814.0 31918.0 31909.0 True False 20675.639521024023 24362.915677400895 23952.995843821896 25111.277405452252 25105.150492308723 19997.415712945065 21111.666432633425 17874.03001612054 23834.678199846683 24707.701631986274 23985.11465640137 0.8620196241382535 1.0157514786321313 0.9986608855934361 1.0469525689238397 1.046697122442499 0.8337427608505499 0.8801986871886371 0.7452134489317588 0.9937279242267647 1.0301264757720079 1.0 14.549851715641958 -4.4254387968680575 16.02341319358885 0.9667891968598998 0.9615909434342939 0.0 0.09878192772025522 0.0 0.0 0.013134770798652894 0.0 3.754578623006249e-05 4.4254387968680575 -0.005198253425605981 SSADKIGEVSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SSADKIGEVSSPK 13 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 SSADKIGEVS(0.235)S(0.765)PK;SSADKIGEVS(0.103)S(0.897)PK 138.66 2.242e-09 195123000.0 46896.0 45846.0 51275.0 49062.0 55325.0 59770.0 56974.0 60995.0 55956.0 55981.0 61312.0 True False 51656.84739698943 49709.60331655098 54754.82984162306 52092.44831211356 51439.162860888566 59283.25293668036 59142.17674736906 59778.406875348155 53604.3639122316 52446.350106222766 53771.01268879061 0.9606820629539323 0.9244684232423561 1.0182964222475495 0.9687830990576273 0.9566337007376439 1.102513231056161 1.0998895834390368 1.111721797417624 0.9969007692393016 0.975364745495225 1.0 15.714541022212455 -5.769054677825717 24.89099192326862 1.0159544835833973 0.9425752402724058 0.24379876395804 0.05425470945860232 176.99452461390865 578524.7273892551 0.008003461722956696 0.02558514565019582 1.701944219538897e-06 5.769054677825717 -0.07337924331099155 SSAEDRS(ph)PENTGSSVAVDNFPQVDK ddPTM_A549_MK2206_60min_R1 2 SSAEDRSPENTGSSVAVDNFPQVDK 25 1 H0Y7V5;Q7Z3E2 H0Y7V5 CCDC186 Coiled-coil domain-containing protein 186 1 S(0.001)S(0.001)AEDRS(0.886)PENT(0.038)GS(0.038)S(0.038)VAVDNFPQVDK;S(0.001)S(0.001)AEDRS(0.983)PENT(0.006)GS(0.006)S(0.003)VAVDNFPQVDK 131.78 3.4308e-24 14165500.0 3945.8 4146.4 3874.3 3667.7 5690.299999999999 4488.9 4205.2 4286.9 5506.9 6270.9 5661.5 True False 4611.754574452038 4357.434049293666 4423.73399741249 4566.28666464931 4853.264407894827 4963.91241850934 4969.230407009523 4894.581203080641 4259.595942712263 4854.299334670804 4255.5933005489505 1.0836925074247918 1.0239310341830783 1.0395105182729398 1.0730082369619958 1.1404436620550136 1.1664442694439385 1.1676939162322013 1.150152483426756 1.0009405603121888 1.1406868541795625 1.0 12.055144566300703 -8.77785177531885 24.898889380471918 1.0004441357727345 1.1048553803639725 0.01995842620956978 0.06252963110153603 149.90371836376426 227414.913265918 0.009156930765482681 0.009762198868199541 1.667816341042961e-09 8.77785177531885 0.10441124459123796 SSAEDRS(ph)PENTGSSVAVDNFPQVDK ddPTM_A549_PD325901_60min_R1 2 SSAEDRSPENTGSSVAVDNFPQVDK 25 1 H0Y7V5;Q7Z3E2 H0Y7V5 CCDC186 Coiled-coil domain-containing protein 186 1 S(0.003)S(0.003)AEDRS(0.975)PENT(0.006)GS(0.006)S(0.008)VAVDNFPQVDK;SSAEDRS(0.986)PENT(0.004)GS(0.004)S(0.004)VAVDNFPQVDK 153.32 9.5914e-34 22314000.0 4208.700000000001 4965.1 5188.5 5130.299999999999 6224.4 5590.1 4946.4 4600.7 5259.200000000001 5797.5 5573.5 True False 4635.964125718814 5383.526402019963 5540.622810985099 5447.186979243333 5787.219617014277 5544.576078991746 5134.637958773938 4508.935429320671 5038.174113360649 5431.444860592461 4887.9948333274815 0.9484388351046806 1.1013772693280754 1.1335165031697352 1.1144011327718986 1.183965984897462 1.1343252740750749 1.050458957886941 0.92245094012328 1.0307241077689384 1.1111805649956115 1.0 12.255027044872584 -7.974753930661759 6.59127491310552 1.0069955868529699 1.1073484159577744 0.25769765122177146 0.06825906350588762 0.13725621846271352 21.021545480686566 0.009458832516704898 0.0129923396189034 1.059854063725273e-08 7.974753930661759 0.10035282910480459 SSAIGIENIQEVQEKRES(ph)PPAGQK ddPTM_A549_MK2206_60min_R1 1 SSAIGIENIQEVQEKRESPPAGQK 24 2 J3KPC5;P47736-3;F2Z357;P47736;A0A0A0MQY8;X6R8W7;P47736-2;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 S(0.001)S(0.001)AIGIENIQEVQEKRES(0.999)PPAGQK 48.123999999999995 0.0021412 4952900.0 1793.6 2454.3 2436.1 2188.6 2899.2 2396.4 2119.8 1487.4 3613.5 3735.6 3555.0 True False 2096.315830690145 2579.213386837124 2781.575611361165 2724.807098249989 2472.731520547017 2649.9854573984217 2504.940220864358 1698.2435049714582 2795.0480195737628 2891.7253655131235 2672.1953869913477 0.7844919727409636 0.9652038916739119 1.0409327195542275 1.0196885719939355 0.9253558076571231 0.9916885083699166 0.9374090805854941 0.6355237020611461 1.0459744198274123 1.0821534157234463 1.0 11.383809784067523 SSAIGIENIQEVQEKRES(ph)PPAGQK ddPTM_A549_PD325901_60min_R1 2 SSAIGIENIQEVQEKRESPPAGQK 24 2 J3KPC5;P47736-3;F2Z357;P47736;A0A0A0MQY8;X6R8W7;P47736-2;P47736-4 J3KPC5;P47736-4 RAP1GAP Rap1 GTPase-activating protein 1 1 SSAIGIENIQEVQEKRES(1)PPAGQK;SSAIGIENIQEVQEKRES(1)PPAGQK 108.75 1.0404000000000001e-11 20534300.0 4555.5 4965.799999999999 4696.4 5880.9 6255.0 5804.2 5806.0 5819.700000000001 6063.3 5864.5 7107.0 True False 5017.971006418146 5384.285393476614 5015.125945747406 6244.149836507051 5815.670378578547 5756.932519576376 6026.950507165104 5703.621518033672 5808.480586693726 5494.214469158168 6232.884054984909 0.8050801141415257 0.8638513641482539 0.8046236543958218 1.00180747490612 0.933062500003881 0.92363863482622 0.9669601510307086 0.9150854512482154 0.9319089743131422 0.881488315952874 1.0 12.605684160437661 -2.3787203759225655 0.26349241212947394 0.9765496584000602 1.7351254640844988e-18 0.4004351410242445 0.05008568473139829 19.010532061758376 0.28019946013986663 0.018231616231805248 8.189543691478866 0.00418099476793005 2.3787203759225655 -0.9765496584000602 SSAQADS(ph)GSSDDEAASEAR ddPTM_A549_MK2206_60min_R1 2 SSAQADSGSSDDEAASEAR 19 0 F8WEI6;A0A0R4J2F6;Q12894;Q12894-2 F8WEI6 IFRD2 Interferon-related developmental regulator 2 1 SSAQADS(0.322)GS(0.322)S(0.322)DDEAAS(0.033)EAR;SSAQADS(0.412)GS(0.293)S(0.293)DDEAAS(0.001)EAR 61.375 0.0027332 1701670.0 338.78 0.0 195.66 440.84000000000003 274.35 145.35 182.76 0.0 211.33 446.94 372.44 True False 395.95778162422357 0.0 223.40753011737038 548.84581979006 233.99347842924735 160.73084052447862 215.9651263162421 0.0 163.46409242466407 345.97594358668925 279.952869178919 1.4143730078049865 0.0 0.7980183620643293 1.960493640946721 0.835831685224491 0.57413535712597 0.7714338736718498 0.0 0.5838986144492541 1.2358363913233361 1.0 8.129040155783787 -6.9940067509476 24.999158946571924 0.7145656365909152 1.0070622682704007 0.0856960570209716 0.5254120238486859 383.0007044032733 1597561.5068747567 0.07455977185566498 0.140629853130645 1.0138956249805082e-07 6.9940067509476 0.2924966316794855 SSAQADSGS(ph)SDDEAASEAR ddPTM_A549_PD325901_60min_R1 2 SSAQADSGSSDDEAASEAR 19 0 F8WEI6;A0A0R4J2F6;Q12894;Q12894-2 F8WEI6 IFRD2 Interferon-related developmental regulator 2 1 SSAQADS(0.063)GS(0.468)S(0.468)DDEAAS(0.001)EAR;S(0.002)S(0.002)AQADS(0.182)GS(0.399)S(0.399)DDEAAS(0.018)EAR 84.874 8.2262e-05 2269370.0 243.55 213.78 0.0 224.3 307.42 328.52 143.04 0.0 149.88 374.42999999999995 270.15 True False 268.2750167079664 231.79599086097525 0.0 238.15450157773992 285.82787974142565 325.84464204045895 148.48346547449137 0.0 143.58106482173991 350.7884258993764 236.92326262194646 1.132328728462799 0.9783589348541402 0.0 1.0051967837272193 1.2064154299509005 1.3753172163613265 0.6267154344882687 0.0 0.6060234998994136 1.4805993384411653 1.0 7.888276048216344 -5.533131400390848 24.993487427296856 0.770021985152136 1.093836840139754 0.03713355502192639 0.4675584956241992 385.75442818307204 940378.3544783593 0.05920076094460334 0.22977858799529777 2.9300066066243763e-06 5.533131400390848 0.323814854987618 SSAQS(ph)PER ddPTM_A549_PD325901_60min_R1 2 SSAQSPER 8 0 Q709C8-4;Q709C8-2;Q709C8-3;Q709C8 Q709C8-4 VPS13C Vacuolar protein sorting-associated protein 13C 1 S(0.001)S(0.004)AQS(0.995)PER;S(0.001)S(0.002)AQS(0.997)PER 52.725 0.026525 14469700.0 1895.21 1593.35 1419.3899999999999 1565.06 1722.15 2110.16 1253.21 1855.29 1605.02 1826.19 2127.1099999999997 True False 2087.610324020139 1727.6271963623112 1515.7183408854464 1661.7302016908507 1601.19212509497 2092.9755565813184 1300.9015923328247 1818.2847855031505 1537.5665910073983 1710.8840517404653 1865.4889548612564 1.119068713100691 0.9260988610306736 0.8125045913221053 0.8907746129295309 0.8583230262084596 1.1219447593764933 0.6973515382885651 0.9746960874600211 0.8242164002100741 0.9171236566596077 1.0 10.865338102970592 -5.270585454693401 4.865104674960208 0.9063825138526818 1.1290873980728386 0.2602123128695142 0.10526575084382311 0.17446689976506569 11.99155133483547 0.014071387929812036 0.12892800650069433 5.363083334348119e-06 5.270585454693401 0.22270488422015688 SSAS(ph)APDVDDPEAFPALA ddPTM_A549_PD325901_60min_R1 2 SSASAPDVDDPEAFPALA 18 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(0.136)S(0.136)AS(0.728)APDVDDPEAFPALA;S(0.154)S(0.154)AS(0.692)APDVDDPEAFPALA 108.58 3.498e-09 9031100.0 1468.01 1357.69 1537.21 1826.29 2087.4 1680.47 1900.01 1896.52 1769.24 1729.85 2099.6 True False 1617.0412945081566 1472.1073011134688 1641.5343145946636 1939.095785494475 1940.7882251390668 1666.7848094780518 1972.3159202753664 1858.6924208088428 1694.8849954978325 1620.626975781953 1841.362510460999 0.8781765053440337 0.7994663151607858 0.8914780795573454 1.0530766073916689 1.0539957309401156 0.9051910202411798 1.0711176691555333 1.0094114603992372 0.9204515601186566 0.8801238032027799 1.0 10.84655796379969 -6.036397730044895 6.455324645594161 0.9800124495475738 0.8398742892915501 0.47469150561863604 0.06224550596009555 0.11526749705049447 14.766193720355872 0.008101442222066196 0.022437186045415138 9.196070032155584e-07 6.036397730044895 -0.14013816025602377 SSASAPDVDDPEAFPALA ddPTM_A549_MK2206_60min_R1 1 SSASAPDVDDPEAFPALA 18 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 55.426 0.0031697 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSASGYGS(ph)REGDR ddPTM_A549_PD325901_60min_R1 1 SSASGYGSREGDR 13 1 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 SSAS(0.007)GY(0.019)GS(0.974)REGDR 45.723 0.012614 7246900.0 973.45 1173.6 1061.8 847.83 1158.7 816.7 827.05 1001.0 1162.5 1154.8 1438.5 True False 1072.273927383986 1272.5033907495583 1133.860133122093 900.198533538365 1077.316909297996 810.0490659760218 858.5238403291249 981.0342697306908 1113.6441677026464 1081.8857309205985 1261.5736194028136 0.849949547844512 1.0086636016944603 0.8987665211791794 0.7135521222808135 0.8539469221050782 0.6420941699458425 0.6805182251159636 0.7776274445205024 0.8827421171265518 0.8575684480725958 1.0 10.301008682215562 -9.480407140920146 1.17727812613452 0.9729333335360355 0.805482515567038 0.14269522216658892 0.10590323020218215 0.37536957510970037 1.0788376286816541 0.02847405661560005 0.021790424663698574 3.308208392640932e-10 9.480407140920146 -0.16745081796899752 SSATIQNET(ph)PK ddPTM_A549_MK2206_60min_R1 2 SSATIQNETPK 11 0 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 SSATIQNET(1)PK;SSATIQNET(1)PK 172.76 3.7732e-15 19265100.0 8534.6 9943.6 8309.2 7835.700000000001 11849.0 9823.8 9224.7 9643.3 12627.599999999999 12611.4 11635.5 True False 9975.031829063408 10449.686767450434 9487.569504504003 9755.446851757943 10106.027796275383 10863.34799548933 10900.708583549125 11010.267306367667 9767.468762133569 9762.475981002302 8746.084226536654 1.1405140369901745 1.1947846026619373 1.0847791147171433 1.1154073753553349 1.155491707433196 1.2420813376720805 1.246353030819791 1.2588796335806158 1.1167819231031315 1.116211064076172 1.0 13.094421526589285 -9.7003859690428 1.0538854349432505 1.0207901615035777 1.175859619679038 0.3083836503548173 0.062384107248878974 0.2553137008517691 0.5848689467466706 0.018685172066478645 0.012276164775692343 1.9934898600773363e-10 9.7003859690428 0.15506945817546036 SSATIQNET(ph)PK ddPTM_A549_PD325901_60min_R1 2 SSATIQNETPK 11 0 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 SSATIQNET(1)PK;SSATIQNET(1)PK 147.96 1.6307e-11 29326000.0 20074.6 21248.6 21299.2 20662.7 25861.0 19174.7 21039.0 21647.6 22375.0 23270.6 23026.5 True False 22112.558613860565 23039.29409396817 22744.69179449433 21938.988050603522 24044.612575606676 19018.547600551523 21839.65065798255 21215.821635786335 21434.65656115846 21801.290344614565 20194.38647701001 1.094985412853927 1.1408761598277273 1.1262878335218391 1.0863904221888407 1.1906582357914113 0.941773973782412 1.0814713624920254 1.0505801530509065 1.061416576609565 1.0795718091972692 1.0 14.30166669592863 -7.2524867369002495 24.99033103240203 1.0303963820343556 1.1261749196534188 0.5089845982067043 0.04482716556927792 382.6890126053425 1068234.0113972658 0.006216011953111236 0.01067194544562384 5.591306028317755e-08 7.2524867369002495 0.09577853761906319 SSATIQNET(ph)PKK ddPTM_A549_PD325901_60min_R1 1 SSATIQNETPKK 12 1 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 SSATIQNET(1)PKK 61.641000000000005 0.0049612 10537000.0 4310.0 3962.3 4104.4 3928.3 5299.8 4175.3 3857.0 4703.2 4728.9 4647.8 5382.4 True False 4747.548027145697 4296.216926693057 4382.949265762216 4170.942169183395 4927.560331317435 4141.297741116303 4003.7802456313843 4609.390986410977 4530.160778192727 4354.3371148014885 4720.398921844772 1.005751442992516 0.9101385280831431 0.928512470731885 0.8835995089061996 1.0438864199620872 0.8773194405141183 0.8481868401212737 0.9764833571755812 0.9596987147057269 0.922451086633961 1.0 12.204693071844057 -9.305609292296584 0.9849665296498268 0.990584048112198 0.9307609032095375 0.0 0.058359119566316064 0.5836504610259761 1.1937012604155752 0.014187640411810584 0.011315302853566661 4.94755587627668e-10 9.305609292296584 -0.0598231449026605 SSATSGDIWPGLS(ph)AYDNSPR ddPTM_A549_PD325901_60min_R1 1 SSATSGDIWPGLSAYDNSPR 20 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSATSGDIWPGLS(0.745)AYDNS(0.255)PR 127.22 1.2087e-16 14013000.0 1501.4 1169.9 1367.7 1660.5 1448.1 1557.9 1388.7 1406.8 1617.9 1520.7 1906.7 True False 1653.8210227277377 1268.491578764408 1460.5203466482267 1763.0653137308832 1346.3904516737957 1545.2129789200987 1441.547738425798 1378.7402703867497 1549.9052893988062 1424.6827424757148 1672.1879875671495 0.9890162081201566 0.7585819227238465 0.8734187528599126 1.0543463574905536 0.8051669200378878 0.9240665465897853 0.8620727747979412 0.8245127226351302 0.9268726368820223 0.8519871886823396 1.0 10.707521329141676 -9.676655933996459 0.9981956537356573 0.9876242167497866 0.8861967143340375 0.0 0.08922715621556325 0.49503587303749347 1.0238917623824761 0.023245093367578403 0.015136564562754355 2.105445800217572e-10 9.676655933996459 -0.10142750241574916 SSATSGDIWPGLSAYDNS(ph)PR ddPTM_A549_MK2206_60min_R1 3 SSATSGDIWPGLSAYDNSPR 20 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSATSGDIWPGLS(0.042)AY(0.007)DNS(0.95)PR;SSATSGDIWPGLS(0.002)AYDNS(0.998)PR;SSATSGDIWPGLS(0.007)AYDNS(0.993)PR 167.99 3.0414e-34 13414300.0 2227.79 2843.0699999999997 2004.3200000000002 2039.79 3468.2 2730.2400000000002 2411.8599999999997 2616.94 4739.8 3304.93 3767.6000000000004 True False 2603.786487763827 2987.770119266192 2288.562714733966 2539.538641569654 2958.0323742967585 3019.1521846133655 2850.0637423784824 2987.8992590426305 3666.242867905282 2558.34401762643 2832.000939529845 0.9194158276642717 1.055003223184738 0.8081080351314792 0.8967294488225896 1.0445026105068442 1.0660844572723167 1.0063781062345396 1.0550488233731543 1.2945768543826592 0.9033697630238617 1.0 11.46760602870405 -7.4658159355945815 1.0451302321218694 1.132813074644857 0.9275263111700146 0.08788238008099136 0.11601450459128657 0.4385379371784137 0.9558017564635024 0.021556307431397283 0.042814109484595485 3.4212441231259556e-08 7.4658159355945815 -0.20528676347484243 SSATSGDIWPGLSAYDNS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SSATSGDIWPGLSAYDNSPR 20 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSATSGDIWPGLS(0.001)AYDNS(0.999)PR 176.69 9.9046e-35 14722000.0 1559.0 1158.7 1236.5 1315.5 973.38 1610.0 1022.6 1311.2 1922.1 1372.6 1294.2 True False 1717.2685323248593 1256.3477154580044 1320.4163256785346 1396.7554472827333 905.0131467787022 1596.888693793799 1061.5156025881909 1285.0470873834993 1841.3208212828001 1285.9338017506182 1135.0216046097469 1.5129831232730637 1.106893217147151 1.163340257415216 1.2305981151459915 0.7973532337209315 1.4069236103596947 0.9352382353577935 1.1321785260865898 1.6222782137401686 1.1329597573543626 1.0 10.148504043470522 SSAVS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SSAVSPR 7 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 S(0.002)S(0.003)AVS(0.995)PR;SS(0.001)AVS(0.999)PR 66.351 0.024338 17345100.0 1394.85 1376.33 1016.88 963.47 1404.5100000000002 987.8199999999999 824.41 936.06 1618.3899999999999 1723.72 2277.0 True False 1630.2665791916525 1446.3793182192628 1161.0888747099646 1199.5201932518112 1197.9084395431473 1092.3504567381533 974.1946256641115 1068.7493715635223 1251.8272490377701 1334.330454824468 1711.5580579969894 0.9525043988864327 0.845065881032361 0.6783812382436909 0.7008352346841168 0.6998935466700098 0.6382199257771686 0.5691858485970361 0.6244306855791171 0.7313963106239963 0.7795998789465634 1.0 10.741094515697368 -10.358458744143142 0.8593376345063024 0.9904561224883283 0.7102288150480159 0.1701060077287495 0.11804412967333727 0.374268364747197 0.5239667541478399 0.060393873626514355 0.021029824584087555 4.380677234902442e-11 10.358458744143142 -0.2802273074403123 SSAVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SSAVSPR 7 0 A0A087WWW8;Q9Y6J0-2;Q9Y6J0 A0A087WWW8 CABIN1 Calcineurin-binding protein cabin-1 1 S(0.005)S(0.003)AVS(0.991)PR;SS(0.001)AVS(0.998)PR 66.351 0.024338 31222000.0 1727.0900000000001 1583.44 1657.54 1337.8600000000001 1581.84 1348.1399999999999 1239.24 1586.72 1749.8899999999999 1663.94 1944.0500000000002 True False 1902.422905383541 1716.8820458831644 1770.0306319977353 1420.4965736994884 1470.7370154517491 1337.1611948143925 1286.3999563381478 1555.0716248422405 1676.348208706395 1558.8785444302227 1704.9441743483067 1.1158270951075089 1.007001913443542 1.0381751253962948 0.8331631000425309 0.8626305996288235 0.784284444577492 0.7545114823656076 0.9120953332308648 0.9832276234775593 0.9143282037525272 1.0 10.735508785958805 -5.713602782664225 1.8792812595465915 0.9376597405345808 1.095552885681181 0.2997084463890811 0.08968788441172686 0.5434535385251187 3.346558271052391 0.015612866795707536 0.10987442356339247 1.933736155186971e-06 5.713602782664225 0.15789314514660013 SSAWAEGGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SSAWAEGGSPR 11 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 SSAWAEGGS(1)PR;SSAWAEGGS(1)PR 111.12 7.098300000000001e-05 12786800.0 3840.1 3949.7 3119.1 2708.2 4673.4 4168.2 4166.0 3579.5 5479.5 5712.1 5720.5 True False 4488.214998568925 4150.722859467292 3561.4352815551974 3371.7091215757177 3985.949050815546 4609.276157372771 4922.908274422544 4086.9050867590004 4238.401998963452 4421.732642774261 4299.941972231784 1.0437850156009016 0.9652974124469305 0.8282519402713515 0.7841289820536138 0.9269774049408235 1.0719391533975595 1.1448778393321954 0.950455869672536 0.9856881851741847 1.0283237939788439 1.0 12.070101475421401 -7.0195631017034446 22.535047775020765 1.0067691428345644 0.8980653944255875 0.3392336367361177 0.0803723916897774 215.81064757308434 248596.97656893212 0.012268630600511045 0.021489715013437116 9.559537876712997e-08 7.0195631017034446 -0.1087037484089769 SSCS(ph)TPLSQANR ddPTM_A549_PD325901_60min_R1 1 SSCSTPLSQANR 12 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 SSCS(0.5)T(0.5)PLSQANR 205.31 4.1856e-25 13655000.0 3478.2 3373.6 4395.6 3891.9 4394.6 4046.1 3686.0 3893.0 3153.7 3434.0 3806.6 True False 3831.30430348449 3657.905111650229 4693.911848890069 4132.2938238537945 4085.938456546968 4013.1499030801797 3826.272747056596 3815.351061000579 3021.1609562871713 3217.176653949895 3338.412332025548 1.1476426284226804 1.095702012768097 1.4060311855013086 1.2378021085689457 1.2239166556360839 1.202113311343192 1.1461354579693406 1.1428639369678022 0.9049693853886863 0.9636846302918806 1.0 11.704946439671277 -8.60550200564982 3.468618535831821 0.955201729495023 1.210705085959576 0.6660607246965495 0.07768580789996786 0.10404771318784169 2.49940808849495 0.014320923488014416 0.016341023939011032 2.480264483360223e-09 8.60550200564982 0.255503356464553 SSCST(ph)PLSQANR ddPTM_A549_MK2206_60min_R1 2 SSCSTPLSQANR 12 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 SSCS(0.04)T(0.96)PLSQANR;SSCS(0.064)T(0.935)PLSQANR 185.99 2.8803e-19 17368000.0 3479.5 3819.1 3012.3 3217.5 4256.7 3938.6000000000004 3402.4 3251.3999999999996 4575.7 4662.2 4549.1 True False 4066.7545343924867 4013.4758773049957 3439.489435615631 4005.7876444390654 3630.5450688163914 4355.380037768911 4020.572038621043 3712.295906994889 3539.3112558914277 3609.0057819614735 3419.4329212270977 1.1893067149078893 1.173725576656354 1.005865450456427 1.1714771825386616 1.061738935213133 1.2737141327533161 1.1758008217275455 1.0856466532651543 1.0350579576865366 1.0554398536545486 1.0 11.739541373057364 -8.627228053580842 2.4968221286348276 1.0151900721978533 1.1472863979006749 0.3783646781028429 0.06710897332454524 0.19002660431614415 2.366342419191249 0.011625670038813507 0.013173115597845685 2.3592390412899117e-09 8.627228053580842 0.1320963257028216 SSCST(ph)PLSQANR ddPTM_A549_PD325901_60min_R1 1 SSCSTPLSQANR 12 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.002)S(0.002)CS(0.316)T(0.679)PLSQANR 179.94 1.1332e-16 14066000.0 5868.8 5969.5 6574.6 5415.3 6001.8 6173.1 6175.3 6658.4 5259.3 6174.9 6673.3 True False 6464.596255617788 6472.570714962076 7020.791892281513 5749.79078196137 5580.254273085965 6122.82832028478 6410.304420753821 6525.592988586245 5038.269910708411 5785.0157601849705 5852.526405534093 1.1045821595106222 1.1059447265101914 1.1996172944461592 0.982445935916568 0.9534778463894379 1.046185509645047 1.0953055102309832 1.1150044504567647 0.8608709404445012 0.988464700426591 1.0 12.51484382319154 -8.753424135789555 24.999969610222063 0.9343001646924205 1.0730222427591387 0.37425259088437846 0.07149225372193702 138.33029230433908 431459.2491950464 0.013943926337570195 0.015676157373360144 1.7643139346220688e-09 8.753424135789555 0.1387220780667182 SSDEENGPPS(ph)SPDLDR ddPTM_A549_PD325901_60min_R1 1 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 SSDEENGPPS(0.5)S(0.5)PDLDR 45.013999999999996 0.022668 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSDEENGPPSS(ph)PDLDR ddPTM_A549_MK2206_60min_R1 4 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 SSDEENGPPS(0.001)S(0.999)PDLDR;SSDEENGPPS(0.002)S(0.998)PDLDR;SSDEENGPPS(0.084)S(0.916)PDLDR;SSDEENGPPS(0.01)S(0.99)PDLDR 290.27 4.188599999999999e-124 155868000.0 6166.1 6193.6 6212.599999999999 6086.900000000001 8551.4 6447.7 6661.4 6706.099999999999 9683.9 9627.4 10802.2 True False 7206.786933328782 6508.827784995482 7093.640098166081 7578.1907732513255 7293.500387971081 7129.9913343631315 7871.690153441748 7656.710211569918 7490.512112010616 7452.563653480315 8119.715614446677 0.8875664217237358 0.8016078510699207 0.8736315943805972 0.9333074128566935 0.8982457926228862 0.8781085044009893 0.969453922676351 0.9429776331017092 0.9225091699866217 0.9178355508191249 1.0 12.987213483893688 -2.000000002857687 0.06396175659814866 1.118581506560322 0.43632820759781904 0.405767469850838 0.039025372878967506 107.03317069597692 0.49506738226242814 0.9938899567927426 6.67748044982023 0.009999999934199326 2.000000002857687 -0.682253298962503 SSDEENGPPSS(ph)PDLDR ddPTM_A549_PD325901_60min_R1 4 SSDEENGPPSSPDLDR 16 0 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 SSDEENGPPS(0.006)S(0.994)PDLDR;SSDEENGPPS(0.012)S(0.988)PDLDR;SSDEENGPPSS(1)PDLDR;SSDEENGPPS(0.03)S(0.97)PDLDR 294.29 2.7346999999999993e-124 257530000.0 13796.600000000002 13703.4 12934.5 13385.899999999998 14852.4 14635.599999999999 12739.5 12136.800000000001 14482.7 13266.5 15368.8 True False 15197.220675479897 14858.233610086478 13812.312951467055 14212.716641415374 13809.218661998397 14516.412526017708 13224.308643821889 11894.72200286459 13874.042483945906 12428.850925924946 13478.53503085017 1.1275127927995094 1.1023626511396383 1.0247636645861677 1.0544704308654302 1.0245340929404676 1.0770022478549788 0.9811384259159918 0.8824936816678898 1.0293435044825336 0.9221217956905059 1.0 13.718376079438604 -4.857683860882798 0.5361013113141326 1.0041531714195056 1.281131433079518 0.4501882762615823 0.05161769622892207 4.034801018335979 0.5718469749050689 0.008646897947855762 0.7679066958666919 1.3877656675578002e-05 4.857683860882798 0.2769782616600125 SSDGGS(ph)EEPPDRR ddPTM_A549_MK2206_60min_R1 1 SSDGGSEEPPDRR 13 1 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 S(0.259)S(0.259)DGGS(0.482)EEPPDRR 56.225 0.012953000000000001 3602900.0 121.39 0.0 0.0 0.0 0.0 0.0 0.0 147.5 173.32 0.0 172.08 True False 141.87766429944062 0.0 0.0 0.0 0.0 0.0 0.0 168.40857669980508 134.0632967351667 0.0 129.3477868336065 1.0968696703094936 0.0 0.0 0.0 0.0 0.0 0.0 1.3019826687598957 1.036456053999797 0.0 1.0 7.015111559209082 -8.256206516587486 24.993108381673547 1.0390539281627686 0.12656186476528403 0.3128802196628586 0.4459822064035443 189.01721370435186 902781.2598203798 0.04847932703539579 0.0616295862004137 5.543620389172436e-09 8.256206516587486 -0.9124920633974847 SSDGGS(ph)EEPPDRR ddPTM_A549_PD325901_60min_R1 1 SSDGGSEEPPDRR 13 1 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 S(0.207)S(0.207)DGGS(0.587)EEPPDRR 67.456 0.0035110999999999996 1888600.0 0.0 217.66 160.34 104.35 0.0 150.1 0.0 247.98 111.48 394.69 355.33 True False 0.0 236.0029720778364 171.22163660274668 110.79546250395524 0.0 148.87763536549636 0.0 243.0338443634533 106.79488328214278 369.76920604178304 311.626662622455 0.0 0.7573259941616776 0.549444759193108 0.35553909787939825 0.0 0.477743573392069 0.0 0.7798878386022318 0.3427013670249646 1.1865775634537712 1.0 8.283674864726228 -10.807381827792067 0.5661679734869424 1.1233171739934646 0.3542182905724751 0.5176257060278968 0.27015085243082587 0.9645543350360695 0.4095187688319319 0.3965285532531439 0.05548965816024739 1.5581819609026825e-11 10.807381827792067 -0.7690988834209895 SSDGRPDS(ph)GGTLR ddPTM_A549_MK2206_60min_R1 3 SSDGRPDSGGTLR 13 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.001)S(0.001)DGRPDS(0.951)GGT(0.047)LR;SSDGRPDS(0.864)GGT(0.135)LR;S(0.052)S(0.063)DGRPDS(0.705)GGT(0.18)LR 99.45100000000001 4.3825e-05 36733700.0 1587.68 2351.58 1973.22 2022.45 2495.6400000000003 1779.1000000000001 1903.52 1815.4699999999998 2661.6800000000003 2669.01 2500.7 True False 1855.6415689507871 2471.265377589716 2253.05226708677 2517.950340791232 2128.5346619543166 1967.363181129 2249.364944438023 2072.818432143695 2058.8137298295537 2066.078787292051 1879.7071741910715 0.9871971519975493 1.3147076371899364 1.1986187519108484 1.3395439328866887 1.132375665305596 1.0466327990558695 1.196657104533334 1.102734756032268 1.0952842858173164 1.099149280089961 1.0 10.876292217178552 -8.882631105760957 0.3867430466524859 0.9991593541757914 1.2090208027992357 0.18260406735652934 0.09967530521269737 0.835512609931835 0.33574739928788233 0.05890047240625554 0.04909324542488066 1.310294428128307e-09 8.882631105760957 0.20986144862344436 SSDGRPDS(ph)GGTLR ddPTM_A549_PD325901_60min_R1 5 SSDGRPDSGGTLR 13 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 SSDGRPDS(0.5)GGT(0.5)LR;SSDGRPDS(0.967)GGT(0.033)LR;S(0.001)S(0.002)DGRPDS(0.983)GGT(0.013)LR;S(0.01)S(0.01)DGRPDS(0.49)GGT(0.49)LR;SSDGRPDS(0.935)GGT(0.065)LR 103.04 3.5365e-05 45431800.0 3095.71 3295.8 3288.03 3711.74 3811.3500000000004 3469.7999999999997 3750.0499999999997 3888.88 3638.1 3896.27 3774.35 True False 3409.9842002587484 3573.5486326111063 3511.175488330604 3941.0057498268393 3543.653924443699 3441.543099208522 3892.760204856096 3811.31323763266 3485.203308833547 3650.258847258403 3310.128877575953 1.0301665966419775 1.0795799090541933 1.0607367924906537 1.1905898216002044 1.070548626807171 1.039700635985148 1.1760146957500974 1.1514093192721033 1.052890518083333 1.1027542981744962 1.0 11.692671673120596 -9.249464679489755 1.8584071923136554 1.0169433284167417 1.0997149165052886 0.04075294491438053 0.05776625861565129 0.26455955111210944 1.8862382033244889 0.011044695795185685 0.00999291769618803 5.630349063055705e-10 9.249464679489755 0.0827715880885469 SSDGRPDSGGT(ph)LR ddPTM_A549_MK2206_60min_R1 1 SSDGRPDSGGTLR 13 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.018)S(0.022)DGRPDS(0.325)GGT(0.634)LR 89.35799999999999 7.4515e-05 14502000.0 1657.1 1901.8 1924.2 1329.8 2037.3 1616.0 1607.5 1762.8 2455.7 2544.8 2425.0 True False 1936.7779677947372 1998.593496755426 2197.080493978554 1655.6010596969902 1737.6158687949912 1787.0040473860174 1899.5619421829665 2012.6822983485854 1899.4878709470859 1969.9279125596433 1822.8055734047864 1.062525809692947 1.096438109426168 1.2053290411410504 0.9082707908361956 0.9532645138610857 0.9803591087600769 1.0421089170990454 1.1041672944795378 1.042068281258909 1.0807120305650864 1.0 10.831944971522597 -6.254835658524357 24.99775025029053 1.0143150137456465 1.118931691022245 0.37797897724855045 0.06142793550503151 434.5141722864364 1644806.6597289166 0.008387160523439333 0.02166559706161629 5.561146569355365e-07 6.254835658524357 0.10461667727659862 SSDGSLS(ph)HEEDLAK ddPTM_A549_MK2206_60min_R1 2 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;E9PJZ7 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 S(0.04)S(0.04)DGS(0.276)LS(0.644)HEEDLAK;S(0.054)S(0.054)DGS(0.407)LS(0.485)HEEDLAK 117.37 1.0184e-06 9028800.0 2018.1399999999999 2030.31 2190.6 1670.21 2712.8 2087.16 1495.91 2182.0 3281.4 3124.7 3858.2 True False 2358.752693214211 2133.644106844835 2501.2600198053315 2079.411524978576 2313.7507136244294 2308.0218858553203 1767.6974836273237 2491.3051820947435 2538.16813931904 2418.8280998016016 2900.102459097052 0.8133342619724578 0.7357133539030707 0.8624729833111137 0.7170131242969952 0.7978168862160879 0.7958414981565596 0.6095293213115295 0.8590404019278727 0.8751994714384332 0.8340491875430859 1.0 11.501888155460927 -9.280565841524401 0.8611456989096405 0.9748717763734741 0.7672886954219712 0.3040242262145555 0.0798572204908606 0.23810566994425858 0.37667389418100833 0.01931459620307433 0.015008255230728346 5.241241347719113e-10 9.280565841524401 -0.2075830809515029 SSDITSDLGNVLTS(ph)TPNAK ddPTM_A549_MK2206_60min_R1 4 SSDITSDLGNVLTSTPNAK 19 0 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 SSDITSDLGNVLT(0.145)S(0.71)T(0.145)PNAK;SSDITSDLGNVLT(0.003)S(0.499)T(0.499)PNAK;SSDITSDLGNVLT(0.006)S(0.497)T(0.497)PNAK;SSDITSDLGNVLTS(0.5)T(0.5)PNAK 216.71 1.6962e-66 39958000.0 5789.88 6648.7 6520.160000000001 5474.5 7414.5 7018.299999999999 5405.83 6774.6900000000005 9594.3 10777.1 9228.9 True False 6767.070195024672 6987.090431106208 7444.816730911136 6815.752745759644 6323.836871928759 7760.971847629502 6387.999336803076 7735.023054117987 7421.206368948824 8342.545624978988 6937.10942531771 0.9754884607020236 1.0072048749304843 1.0731871554080572 0.9825061604023195 0.9115953755679926 1.1187616299239882 0.920844539872674 1.1150210527007414 1.0697836683769686 1.2025968041576498 1.0 12.760118926360729 -7.262598363261584 24.99993968879638 1.0365802751696533 0.9951580186173203 0.13203346371279678 0.07981052226146593 205.08171012432993 4423666.09480155 0.00911846932536623 0.015082692685531083 5.462628129255809e-08 7.262598363261584 -0.041422256552333 SSDITSDLGNVLTS(ph)TPNAK ddPTM_A549_PD325901_60min_R1 1 SSDITSDLGNVLTSTPNAK 19 0 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 SSDITSDLGNVLT(0.016)S(0.729)T(0.256)PNAK 280.69 2.1860999999999997e-126 47799000.0 3912.2 3412.1 4059.4 4477.0 3730.4 4466.9 4713.3 4861.7 4306.2 3889.6 4835.4 True False 4309.363663990581 3699.6496417659932 4334.895295155235 4753.534121995281 3468.3895731813595 4430.523047395973 4892.667210716726 4764.72957957013 4125.225389213878 3644.009992196711 4240.676454126079 1.0161972295239998 0.8724196910062121 1.022217880106718 1.1209377026087908 0.8178859223760628 1.044767997588021 1.1537468759155807 1.1235777195249497 0.9727753187112707 0.8592992253986211 1.0 12.050078700198661 SSDITSDLGNVLTST(ph)PNAK ddPTM_A549_MK2206_60min_R1 1 SSDITSDLGNVLTSTPNAK 19 0 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 SSDITSDLGNVLT(0.092)S(0.162)T(0.746)PNAK 70.917 0.00087337 798460.0 596.76 643.48 848.76 523.75 868.59 453.79 630.49 687.81 935.05 895.16 725.64 True False 697.4784986187842 676.2303834746984 969.1269307084701 652.0687735120308 740.8215616142153 501.80975659857717 745.04187180525 785.3091738297825 723.2626679680226 692.9427342843793 545.4435613548245 1.2787363313746356 1.2397806691402007 1.7767684860029527 1.1954834921735267 1.3582002137381406 0.9200030803409512 1.3659376049002105 1.4397624785947734 1.3260082604541414 1.2704205959699704 1.0 9.091286114158729 -10.646143389007593 0.6881165475152411 0.9726987437303297 1.325920003766591 0.04699339882352194 0.20896543210826454 0.9307451262795472 0.6948183542905512 0.19031742409761643 0.03859190854282069 2.2586899058616742e-11 10.646143389007593 0.3532212600362613 SSDITSDLGNVLTST(ph)PNAK ddPTM_A549_PD325901_60min_R1 2 SSDITSDLGNVLTSTPNAK 19 0 B7Z2R7;Q5T8D3-4;Q5T8D3-2;Q5T8D3-3 B7Z2R7 ACBD5 Acyl-CoA-binding domain-containing protein 5 1 SSDITSDLGNVLT(0.006)S(0.071)T(0.924)PNAK;SSDITSDLGNVLT(0.081)S(0.166)T(0.753)PNAK 281.09 2.1969999999999995e-126 58275000.0 4316.89 4138.44 3988.3 3917.8 3994.1800000000003 4659.0 4222.21 4290.7 4329.42 4526.0 5029.7 True False 4755.137494873548 4487.200862656442 4258.970021596201 4159.7936080306245 3713.6425759729605 4621.058648686528 4382.888512031966 4205.118622510965 4147.469533363603 4240.227587588008 4411.078785895258 1.0779987675755063 1.0172570204378553 0.9655166521202397 0.9430331694214721 0.8418898768817279 1.047602836626427 0.993609210981805 0.9533084369195886 0.9402392781161459 0.9612677064727206 1.0 12.10691581317322 -5.4648251793266 2.40690793443812 0.9656038708739859 1.0827137617117941 0.35402986270790904 0.0480458357932685 0.34015636181931025 3.132345409078065 0.0068364927573781615 0.06793814795577352 3.429057918862491e-06 5.4648251793266 0.1171098908378082 SSDKPIRT(ph)PSR ddPTM_A549_MK2206_60min_R1 1 SSDKPIRTPSR 11 2 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 S(0.005)S(0.04)DKPIRT(0.934)PS(0.021)R 56.482 0.0052044 17807000.0 2671.6 2888.7 3238.9 2493.3 3730.5 2997.9 2700.6 2359.4 3990.3 4134.0 4337.7 True False 3122.500765651087 3035.7224913647055 3698.2247229742975 3104.1586119284916 3181.748391763467 3315.135788155036 3191.2640628673853 2693.8521753594605 3086.503421199722 3200.1265288123072 3260.529375570287 0.9576668098887906 0.9310520291919586 1.1342405778287015 0.9520412958664282 0.9758379776004807 1.0167477137282954 0.9787564212051343 0.8262008603705001 0.9466264724757689 0.981474527660891 1.0 11.67089050234167 -8.001936220176887 24.955252524336103 0.9600675355693614 0.9954764723012655 0.10703651060447816 0.0658608154261014 188.2261074627571 2426016.4736796943 0.01061926254054188 0.014551489724232808 9.955516118027668e-09 8.001936220176887 0.03540893673190404 SSDKPIRT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 SSDKPIRTPSR 11 2 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 SSDKPIRT(0.993)PS(0.007)R;S(0.002)S(0.002)DKPIRT(0.99)PS(0.005)R 66.285 0.001807 56728000.0 4224.8 4633.700000000001 4669.8 4355.5 5302.8 5318.6 4212.3 4784.7 4528.0 5237.5 5265.8 True False 4653.698585866622 5024.198160971565 4986.720709788618 4624.529342941803 4930.349621666875 5275.287084976213 4372.601381559005 4689.265404975462 4337.703906544157 4906.803356162661 4618.139982656474 1.0076997672967232 1.0879267800110113 1.0798115103735175 1.0013835354297023 1.0676050618177255 1.1422969214418943 0.9468317110309357 1.0154013136427438 0.9392751027111562 1.0625064148315704 1.0 12.17309618865838 -7.784556209131037 24.999666159843656 0.9729329992681235 1.0634953736701656 0.31261084697490826 0.04902174411290724 138.8758824743586 150186.69361630062 0.00656651863269941 0.00907618405191294 1.6422670933537436e-08 7.784556209131037 0.09056237440204207 SSDNLGKSLS(ph)SSSIGSNSTYLTSK ddPTM_A549_PD325901_60min_R1 1 SSDNLGKSLSSSSIGSNSTYLTSK 24 1 Q86SQ4-2;Q86SQ4;Q86SQ4-4;Q86SQ4-3 Q86SQ4-2 GPR126 G-protein coupled receptor 126 1 S(0.003)S(0.003)DNLGKS(0.14)LS(0.213)S(0.213)S(0.213)S(0.213)IGSNSTYLTSK 60.79 0.00012307 2081100.0 990.45 1430.6 1313.1 1530.3 1437.9 1662.3 1633.1 1846.1 1735.1 1813.2 2066.3 True False 1090.9997548692468 1551.1616826911372 1402.214862311755 1624.823155436538 1336.9068644857055 1648.7627799338077 1695.2485141666093 1809.2780872625656 1662.1797809727832 1698.7142425573518 1812.158199354907 0.602044432576373 0.8559747616092902 0.7737817055988357 0.8966232396348968 0.7377429106143262 0.9098337995660285 0.9354859386835458 0.9984106729239386 0.9172376791190122 0.9373984253483282 1.0 10.82349319118434 -3.3978438744073842 0.23357571204014835 0.9894778401907245 6.27800115956051e-17 0.6650747133140646 0.0665573582844279 10.353877346551524 0.21666628874767924 0.036475663270943794 3.4804509228958995 0.0004000885527304229 3.3978438744073842 -0.9894778401907244 SSDPGPDIGVVEES(ph)PEKGDEISLR ddPTM_A549_MK2206_60min_R1 2 SSDPGPDIGVVEESPEKGDEISLR 24 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SSDPGPDIGVVEES(1)PEKGDEISLR;SSDPGPDIGVVEES(1)PEKGDEISLR 97.771 1.917e-08 34457000.0 2458.0 2481.12 1918.5 2163.48 3259.8 2350.41 2516.9 2658.4 3495.2 3232.1000000000004 3666.5 True False 2872.8503076697025 2607.3984102796385 2190.572148268297 2693.5326971223076 2780.2877382309493 2599.1288261241143 2974.1881507187004 3035.236341008554 2703.542780687482 2501.9663652090626 2756.006859747897 1.0423959205720168 0.9460783455808044 0.7948355210076209 0.9773316374723013 1.008810166200121 0.9430777782468462 1.0791657285609082 1.1013166858685537 0.9809637342248072 0.9078229817751351 1.0 11.428363763601228 -6.509390786316332 24.475436704564338 1.003040011373627 0.9223479094413879 0.16477163006209694 0.07378047773618045 563.9621543572797 1023371.6830354611 0.009542564223213043 0.0213210570760231 3.0946334368388426e-07 6.509390786316332 -0.08069210193223919 SSDPGPDIGVVEES(ph)PEKGDEISLR ddPTM_A549_PD325901_60min_R1 2 SSDPGPDIGVVEESPEKGDEISLR 24 1 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SSDPGPDIGVVEES(1)PEKGDEISLR;SSDPGPDIGVVEES(1)PEKGDEISLR 185.02 8.045599999999999e-51 53668000.0 5332.299999999999 5651.0 5554.1 5365.9 7052.6 5367.700000000001 6001.9 5998.5 5971.0 5710.6 6950.1 True False 5873.63117056821 6127.229602186227 5931.0346255165005 5697.339456156906 6557.249706149168 5323.987230855265 6230.305588865703 5878.855211767782 5720.059634711829 5350.03174142291 6095.281760313869 0.9636357106264034 1.0052414052587968 0.973053397487418 0.9347130584269377 1.0757910731614004 0.8734603977652893 1.0221521881779063 0.964492773745878 0.9384405610180162 0.8777332946701084 1.0 12.573477197027197 -7.250514205689258 24.9570816318112 0.9678935636754343 0.9872395308212307 0.0685030262499784 0.055254144968284326 2286.078206431147 5222240.5177339995 0.006823676541505849 0.01175606423105618 5.616759057439428e-08 7.250514205689258 0.019345967145796394 SSDPGPDIGVVEES(ph)PEKGDEISLRR ddPTM_A549_MK2206_60min_R1 4 SSDPGPDIGVVEESPEKGDEISLRR 25 2 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SSDPGPDIGVVEES(1)PEKGDEISLRR;S(0.002)S(0.002)DPGPDIGVVEES(0.987)PEKGDEIS(0.009)LRR;SSDPGPDIGVVEES(1)PEKGDEISLRR;SSDPGPDIGVVEES(0.991)PEKGDEIS(0.009)LRR 264.1 4.051399999999999e-138 53749500.0 3568.45 3918.8399999999997 3958.55 3675.3799999999997 6014.9 4459.46 3923.1 4244.52 6496.799999999999 6846.5 5779.5 True False 4170.717119773779 4118.292217281014 4519.931914270243 4575.848264994076 5130.116177889851 4931.357097250028 4635.876488571074 4846.1937082973345 5025.285173257738 5299.8708948992435 4344.290643914626 0.9600456004517136 0.9479780601350453 1.040430368212507 1.0533015951416165 1.180886961390576 1.135135169687081 1.0671193224755564 1.1155316495883538 1.1567562083575214 1.219962320505229 1.0 12.084904910941452 -5.954414837660482 2.1720755145999835 1.089011664433651 0.9501172119192487 0.46841043079736644 0.06242008558500002 0.2552253494214092 2.330692913371106 0.009400806286113563 0.04005275655427153 1.1106703092463614e-06 5.954414837660482 -0.13889445251440224 SSDPGPDIGVVEES(ph)PEKGDEISLRR ddPTM_A549_PD325901_60min_R1 2 SSDPGPDIGVVEESPEKGDEISLRR 25 2 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SSDPGPDIGVVEES(1)PEKGDEISLRR;SSDPGPDIGVVEES(1)PEKGDEISLRR 246.35 1.9905999999999995e-112 93595000.0 3765.6 3944.9 4336.5 3406.7 4828.0 4271.0 4099.700000000001 5384.8 4091.1 3776.3999999999996 5495.299999999999 True False 4147.880939911793 4277.350567627756 4630.800967492898 3617.124121822943 4488.897935695801 4236.218392045538 4255.71632694192 5277.39593970612 3919.165294183479 3537.957459515542 4819.412937576837 0.8606610376900624 0.8875252282860773 0.9608641192346611 0.7505321018708151 0.9314200700039584 0.8789905423990241 0.8830362498635903 1.0950287945982802 0.8132038787599729 0.7341054824188605 1.0 12.234641704223348 -8.042347769632698 24.99019770738093 0.9262100155529267 0.8792642763622124 0.014124758416835026 0.099992914857187 1216.4540570601046 717849.394276904 0.014827970978354647 0.01914355071415022 9.070938664676464e-09 8.042347769632698 -0.04694573919071432 SSDPLDS(ph)GTRSPKRDPIDPVSAGASAAK ddPTM_A549_PD325901_60min_R1 1 SSDPLDSGTRSPKRDPIDPVSAGASAAK 28 3 E7ER60;A0A1W2PR85;O15056-2;O15056 E7ER60 SYNJ2 Synaptojanin-2 1 S(0.005)S(0.005)DPLDS(0.33)GT(0.33)RS(0.33)PKRDPIDPVSAGASAAK 84.06700000000001 5.5418e-07 9281700.0 1778.6 2158.7 2769.8 2597.0 2541.3 2309.3 2402.0 2486.7 2274.1 2983.0 3052.8 True False 1959.162162663884 2340.6212249583086 2957.7752841604574 2757.4107917850683 2362.8078550090577 2290.493826445976 2493.4094244248354 2437.100817721587 2178.527485395775 2794.6528709180366 2677.3249532936456 0.7317610663037829 0.87423875166101 1.1047502024443472 1.0299126329035633 0.8825256165122322 0.8555158101478157 0.9313062358595816 0.9102745689212903 0.8136955817469037 1.0438228155607536 1.0 11.386576537594424 SSDQPLTVPVS(ph)PK ddPTM_A549_MK2206_60min_R1 4 SSDQPLTVPVSPK 13 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 SSDQPLTVPVS(1)PK;SSDQPLT(0.027)VPVS(0.973)PK;SSDQPLT(0.001)VPVS(0.999)PK;SSDQPLT(0.004)VPVS(0.995)PK 213.55 1.6624e-37 370510100.0 36066.36000000001 36530.07 35570.86 32080.41 48397.79 36543.45 32610.15 33987.33 51443.2 50148.3 50660.700000000004 True False 42153.47983015714 38389.29453045561 40615.34282301321 39940.11189014432 41278.53920316472 40410.45362342111 38534.992142381256 38805.138109332795 39791.397337909824 38819.764200493024 38080.25002580944 1.1069643660844406 1.008115611227256 1.0665723779514467 1.048840589625182 1.0839881349305112 1.0611919195917134 1.0119416788561948 1.0190358015777747 1.0449352961427678 1.0194198875843088 1.0 15.216755330616818 -7.753892726290794 24.870260209454667 1.02092735362549 1.060660720847424 0.4327913722469241 0.02472587629356161 136.49877661539196 449834.02628925187 0.003964347292048481 0.00581509559838545 1.762411320309109e-08 7.753892726290794 0.03973336722193399 SSDQPLTVPVS(ph)PK ddPTM_A549_PD325901_60min_R1 4 SSDQPLTVPVSPK 13 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 S(0.002)S(0.002)DQPLT(0.156)VPVS(0.839)PK;SSDQPLT(0.298)VPVS(0.702)PK;SSDQPLT(0.001)VPVS(0.999)PK;SSDQPLT(0.498)VPVS(0.502)PK 108.71 5.7256e-05 597494400.0 9858.5 9460.490000000002 10841.7 9856.0 12465.7 11565.9 11497.5 11375.900000000001 11704.1 12624.5 13088.1 True False 10859.327662555883 10257.758693892541 11577.482958438311 10464.782735399936 11590.152236330381 11471.711145061923 11935.043654173403 11148.998750279095 11212.217379104119 11827.38691548935 11478.34667230168 0.9460707166791235 0.8936616907246292 1.0086368088512134 0.9116977413352074 1.0097405634470422 0.9994219091451759 1.0397876972102416 0.9713070243106237 0.9768146667115607 1.0304085817541941 1.0 13.486627232412594 -6.770729703512 24.999717746612564 0.9933452359550428 0.9416070959980303 0.4375133670371327 0.033501421572316094 148.88025737829685 400628.9362491759 0.004345579276952189 0.008292144835415492 1.6953926517580182e-07 6.770729703512 -0.051738139957012486 SSDSWEVWGS(ph)ASTNRNSNSDGGEGGEGTKK ddPTM_A549_MK2206_60min_R1 1 SSDSWEVWGSASTNRNSNSDGGEGGEGTKK 30 2 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 SSDS(0.001)WEVWGS(0.249)AS(0.249)T(0.249)NRNS(0.249)NS(0.005)DGGEGGEGTKK 71.906 2.9712e-05 4125700.0 1050.7 1092.5 1144.9 1278.1 1912.1 1000.3 1107.0 1341.5 2324.7 1960.1 1741.8 True False 1228.032472851324 1148.1035835552118 1307.2640357322766 1591.2345573760892 1630.832622943554 1106.1510820545993 1308.1275707599034 1531.6617331714485 1798.1591617830716 1517.3120486514279 1309.2629887655494 0.9379570669825362 0.8769083013930699 0.998473222682971 1.215366638353078 1.245611185023415 0.8448654636587138 0.9991327807969913 1.1698656009634778 1.3734132693069423 1.1589054771051304 1.0 10.3545392020212 -8.279137513814954 10.251598019579784 1.1808068843002182 1.020617879799613 0.2263501041112852 0.14086151761868013 0.7004928328938468 397.9017548659672 0.029314299755657455 0.035812871086658093 5.2585073609079714e-09 8.279137513814954 -0.16018900450060514 SSDSWEVWGS(ph)ASTNRNSNSDGGEGGEGTKK ddPTM_A549_PD325901_60min_R1 1 SSDSWEVWGSASTNRNSNSDGGEGGEGTKK 30 2 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 SSDSWEVWGS(0.249)AS(0.249)T(0.249)NRNS(0.249)NS(0.005)DGGEGGEGTKK 71.288 4.1107e-05 3451600.0 1736.6 1679.0 1974.8 1709.8 1646.4 1483.7 1804.3 2167.9 2046.3 2242.9 2532.4 True False 1912.8983535826476 1820.495222451012 2108.821803437098 1815.4104627624595 1530.7625437716567 1471.6172391191667 1872.9636238508435 2124.6595338153497 1960.3011271999358 2101.2829112242907 2220.930854206247 0.8613047767605132 0.81969919009552 0.9495215933639606 0.8174097177875809 0.6892436749539174 0.662612812250347 0.8433236992964529 0.9566527160408582 0.8826484280171525 0.9461271192863326 1.0 11.116948761812347 -9.28771153278219 0.6495663515231896 0.9815215834591857 0.8101042169937598 0.35089430662938925 0.08296101416059405 0.5224334632282089 0.4894528367160401 0.03397104065601886 0.023615969672507942 5.155709835963174e-10 9.28771153278219 -0.17141736646542594 SSDT(ph)FRR ddPTM_A549_MK2206_60min_R1 1 SSDTFRR 7 1 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;H0YD14 Q9NZM1-5 MYOF Myoferlin 1 SSDT(1)FRR 66.351 0.015028999999999999 15519000.0 1216.1 1217.3 1297.9 1352.2 1673.9 1353.8 1110.7 989.68 1761.5 1795.4 1828.6 True False 1421.3479492095707 1279.2553704913128 1481.9617363760344 1683.4890607025636 1427.671527401921 1497.0582174202907 1312.4998128663271 1129.9701707678853 1362.5230625374802 1389.8178930405459 1374.5081532074205 1.0340774959339816 0.9307004600199461 1.0781760245785887 1.2247937975297818 1.0386781075619256 1.089159212280334 0.954886887941409 0.8220905551786617 0.9912804513803916 1.011138340501946 1.0 10.424699749211772 -7.761649759912387 24.999999976289892 0.9771834298076937 1.0663228989412366 0.2981948506802553 0.08112597839255226 7.0827410287785195 841716.4580684553 0.013201295325115742 0.01887049103046184 1.7312119454376615e-08 7.761649759912387 0.08913946913354287 SSDT(ph)FRR ddPTM_A549_PD325901_60min_R1 2 SSDTFRR 7 1 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;H0YD14 Q9NZM1-5 MYOF Myoferlin 1 SSDT(0.999)FRR;SSDT(1)FRR 61.678999999999995 0.017197999999999998 29608000.0 4720.6 4676.7 4519.0 4968.3 4513.9 5106.4 4737.8 4718.7 5864.6 5023.5 5516.2 True False 5199.831836877955 5070.821921880076 4825.68651495455 5275.180607172026 4196.859236109621 5064.8151714215255 4918.09957162364 4624.581826751459 5618.131256695864 4706.315352684129 4837.742370072854 1.0748467857745074 1.0481794055940419 0.9975079584243915 1.0904219786082954 0.8675243357463903 1.0469377622821308 1.0166104755904097 0.9559380126068628 1.1613126179373743 0.9728329854434258 1.0 12.240118226506818 -8.744479610062905 24.99936719215654 1.0761754194844473 1.0120360814887945 0.0 0.07422775214230719 382.12217395053193 563262.4301323507 0.013147164623959783 0.014888601733023985 1.8010276899239422e-09 8.744479610062905 -0.06413933799565275 SSDT(ph)LKLQK ddPTM_A549_MK2206_60min_R1 2 SSDTLKLQK 9 1 A0A087WXN9;Q765P7;I3L2G4;H0YBL3;Q765P7-2;O43312-4;O43312;O43312-5 A0A087WXN9 MTSS1L;MTSS1 MTSS1-like protein;Metastasis suppressor protein 1 1 S(0.01)S(0.007)DT(0.983)LKLQK;S(0.16)S(0.16)DT(0.681)LKLQK 61.435 0.0030231 12515200.0 5659.6 6176.799999999999 6120.3 5948.2 8173.299999999999 5696.6 5777.200000000001 5452.3 9560.0 9612.3 9602.7 True False 6614.802116064866 6491.17273675408 6988.250570261377 7405.509267024848 6971.018397105043 6299.410430902961 6826.8424587119425 6225.180221968458 7394.675264182979 7440.87475396772 7218.084568962535 0.9164207003764187 0.8992929737434574 0.9681585888187797 1.0259659881055192 0.9657712278795033 0.8727260495104429 0.9457969622671204 0.8624421288628946 1.0244650354998301 1.0308655548264387 1.0 12.817400330987857 -8.797506228279632 24.99999880707508 1.0115529571596302 0.9349144680285728 0.4235562355965322 0.044588886198874904 133.94707423851287 92845.81328502041 0.007977250414970717 0.008492559442563805 1.5940200204779068e-09 8.797506228279632 -0.07663848913105742 SSDT(ph)LKLQK ddPTM_A549_PD325901_60min_R1 2 SSDTLKLQK 9 1 A0A087WXN9;Q765P7;I3L2G4;H0YBL3;Q765P7-2;O43312-4;O43312;O43312-5 A0A087WXN9 MTSS1L;MTSS1 MTSS1-like protein;Metastasis suppressor protein 1 1 S(0.137)S(0.137)DT(0.727)LKLQK;S(0.001)S(0.004)DT(0.995)LKLQK 96.229 0.0003553 30015000.0 7741.9 8524.0 9051.8 9464.599999999999 10594.6 9543.3 10217.8 10674.099999999999 9979.4 9816.900000000001 9855.8 True False 8527.851988714448 9242.347394980601 9666.109580895232 10049.20684633383 9850.471845385819 9465.582528871031 10606.643970394702 10461.196701830537 9560.000522298309 9197.05925863737 8643.599081063778 0.9866089239836556 1.0692707179383816 1.1182968448954962 1.1626183435959483 1.1396261849957887 1.0950973593405133 1.2271096647265285 1.2102824996532655 1.1060208175599173 1.0640312180589335 1.0 13.077416441406589 -10.13830025408478 0.9738440550661771 1.0103145120427457 1.1266103418257416 0.2133518044065088 0.06480961839063633 0.42704874897360257 0.807919381248299 0.026977796297469693 0.01264389946059789 7.272768201610653e-11 10.13830025408478 0.11629582978299591 SSDTSSTS(ph)PLNSSASQEELHQDEGLVAAPIVSNSEKPIAK ddPTM_A549_PD325901_60min_R1 1 SSDTSSTSPLNSSASQEELHQDEGLVAAPIVSNSEKPIAK 40 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 SSDTS(0.002)S(0.016)T(0.115)S(0.86)PLNS(0.003)S(0.003)ASQEELHQDEGLVAAPIVSNSEKPIAK 156.5 5.1433000000000005e-52 8243000.0 800.75 1058.3 985.89 614.86 1134.0 1203.2 1067.4 1399.9 1079.2 952.03 1369.3 True False 882.041550519006 1147.4866551041732 1052.7984240381813 652.8385057516236 1054.3517520876205 1193.4015381196893 1108.0204911036922 1371.9778962996954 1033.8449770190928 891.9186633255433 1200.8847807078707 0.7344930710164216 0.955534347289986 0.8766856245922288 0.5436312594175796 0.8779791109236348 0.993768559058788 0.9226701086598508 1.142472548857662 0.8609027224157882 0.742717934021776 1.0 10.229882022487121 -6.9963766476598925 24.990255844791946 0.9521974669867104 0.7865539632594298 0.2547189358756894 0.13201445435733344 106.12770761082558 731949.306134935 0.017116353722357373 0.03223656577440306 1.0083779775441749e-07 6.9963766476598925 -0.16564350372728054 SSEAPVQS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 SSEAPVQSPQR 11 0 Q96NW4 Q96NW4 ANKRD27 Ankyrin repeat domain-containing protein 27 1 SSEAPVQS(1)PQR;SSEAPVQS(1)PQR 76.24 0.0012481 15326700.0 2593.2 3289.8 2786.3 2402.5 3740.9 3080.6 2478.8999999999996 2950.8999999999996 3570.2 4385.5 4442.200000000001 True False 3030.8687623470582 3457.236768128087 3181.439237279101 2991.1126078523243 3190.6185655402633 3406.5870472632187 2929.2840425986683 3369.199111752235 2761.555400437872 3394.81250413797 3339.079141517007 0.9076959945819305 1.035386291130973 0.952789407631025 0.8957896716678015 0.9555384674382724 1.0202175219229879 0.8772730200302588 1.0090204421514681 0.8270410144226905 1.0166912373917685 1.0 11.705234572648624 SSEAPVQS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 SSEAPVQSPQR 11 0 Q96NW4 Q96NW4 ANKRD27 Ankyrin repeat domain-containing protein 27 1 S(0.001)S(0.002)EAPVQS(0.997)PQR;SSEAPVQS(1)PQR 74.53699999999999 0.0013997 20066100.0 3463.3 3035.7 3305.8999999999996 3809.9 3824.1 3203.8 3446.3999999999996 3991.3 3917.8999999999996 3551.3 3474.0 True False 3814.891666453292 3291.529092790076 3530.258253991645 4045.2288700893073 3555.50840842881 3177.709315016506 3577.5546379424445 3911.690390385721 3753.2442878642564 3327.0703119313503 3046.720023500432 1.2521306969553092 1.0803516789863672 1.1587077994569606 1.32773239381598 1.1669954511750056 1.0429935440426776 1.1742315048141927 1.2839021505794643 1.2318966819773896 1.0920170827212468 1.0 11.573041215186667 -10.790344399800041 1.0273194841651736 0.9994937645087669 1.1898959022912678 0.2922464364955427 0.08313417604810189 0.4138105197788075 0.7723205641683896 0.057052285421276785 0.014183132335672146 1.6205244957987425e-11 10.790344399800041 0.19040213778250092 SSEAS(ph)PTAQR ddPTM_A549_MK2206_60min_R1 2 SSEASPTAQR 10 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 S(0.005)S(0.005)EAS(0.816)PT(0.174)AQR;SS(0.001)EAS(0.77)PT(0.229)AQR 80.102 0.001213 61610000.0 1108.42 1277.75 1150.31 1140.92 1401.69 1046.27 1056.9 1178.3600000000001 1597.05 1352.73 1784.85 True False 1295.4941977328124 1342.7820172884874 1313.4412550818363 1420.4454512178445 1195.5032578075147 1156.9855969421824 1248.9250492648077 1345.3961385761518 1235.320724964794 1047.1473534882134 1341.6224856459937 0.9656175351809414 1.0008642756475086 0.9789946643965287 1.058751971150735 0.8910876722760633 0.8623779113131752 0.9309064678231358 1.0028127531928932 0.9207662648632374 0.7805082015929466 1.0 10.389763058505634 -6.761274062491658 24.999999993209993 0.9506047012140506 0.9994674374348196 0.15912692993214017 0.06861258916814424 6.367559711997688 962662.3773699795 0.007508457421300024 0.014887482074142831 1.7327102220644707e-07 6.761274062491658 0.048862736220768976 SSEAS(ph)PTAQR ddPTM_A549_PD325901_60min_R1 2 SSEASPTAQR 10 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 S(0.001)S(0.004)EAS(0.882)PT(0.112)AQR;SSEAS(0.5)PT(0.5)AQR 115.57 8.73e-05 70483000.0 1904.23 1945.62 2135.5 1774.69 1667.75 1589.54 1971.0700000000002 1587.26 1599.52 1671.5500000000002 1844.48 True False 2097.5460277799657 2109.5842255539833 2280.4278718047008 1884.3085706865766 1550.6129934251596 1576.5953132503075 2046.0801474608893 1555.6008541186181 1532.297736880634 1566.0080477314916 1617.620653122073 1.2966859836585403 1.3041279001244208 1.4097420599838306 1.164864312933805 0.9585764069174154 0.9746384668169358 1.2648701928427237 0.9616598620425907 0.9472540635057036 0.9680935049320946 1.0 10.659657606876298 -6.533666645130692 3.664791711669996 0.9952461312938641 1.3315615069769218 0.7176183045018116 0.08938151754191266 0.0881052279127075 2.5614897309008926 0.013092914774960357 0.030024214828615847 2.9263977543795546e-07 6.533666645130692 0.3363153756830577 SSEGGVGVGPGGGDEPPT(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SSEGGVGVGPGGGDEPPTSPR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SSEGGVGVGPGGGDEPPT(0.5)S(0.5)PR 67.217 2.0986e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSEGGVGVGPGGGDEPPT(ph)SPR ddPTM_A549_PD325901_60min_R1 1 SSEGGVGVGPGGGDEPPTSPR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SSEGGVGVGPGGGDEPPT(0.559)S(0.441)PR 64.152 0.0013689 1813200.0 352.95 359.1 415.32 423.7 308.5 292.19 240.15 391.29 463.05 310.55 372.97 True False 388.7812241719427 389.3626172615595 443.5061127220452 449.870986707483 286.8320242672232 289.81050151528564 249.28903966512243 383.4854139889331 443.58961879975055 290.94182000120543 327.0970544516282 1.1885806334261457 1.1903580663981161 1.3558853761785612 1.3753440472329623 0.8769018869585709 0.8860076774495792 0.7621256023936095 1.1723903005847573 1.356140670674702 0.8894663404687753 1.0 8.353574957611306 -6.729336160368889 24.999376013901013 1.1023716141536244 1.2769105194068855 0.24848298135147384 0.18333952277232912 330.64976287580987 257481.64430612256 0.030922822925473527 0.06436698889697798 1.86493560126564e-07 6.729336160368889 0.1745389052532611 SSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SSEGGVGVGPGGGDEPPTSPR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SSEGGVGVGPGGGDEPPTS(1)PR;SSEGGVGVGPGGGDEPPT(0.056)S(0.944)PR 311.5 9.426399999999998e-164 131097000.0 7729.299999999999 8920.0 8351.9 7842.1 11532.4 8812.2 8201.4 7400.099999999999 12776.5 11933.599999999999 12839.7 True False 9033.816876758105 9373.989899599528 9536.325006579096 9763.414852045244 9835.999236877899 9744.701154935054 9691.488219358876 8449.086836855784 9882.643149878008 9237.791471754852 9651.2481323074 0.936025760908327 0.9712722925670354 0.9880924079297473 1.0116219910834503 1.0191427162619564 1.0096829986491405 1.0041694179343263 0.8754398105849749 1.023975657282711 0.9571602910955621 1.0 13.236499813348564 -5.448570801769445 1.6405448175189936 1.0016869893216425 0.9260693890434436 0.04396043037183717 0.041521164385036544 0.8746509701007616 2.9362094114288415 0.00566994854378856 0.09286679322707056 3.559829504374111e-06 5.448570801769445 -0.07561760027819886 SSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SSEGGVGVGPGGGDEPPTSPR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SSEGGVGVGPGGGDEPPT(0.006)S(0.994)PR;SSEGGVGVGPGGGDEPPT(0.002)S(0.998)PR 249.26 5.989899999999998e-98 103431000.0 7335.7 7752.0 8719.5 9076.2 9385.6 9021.3 8702.5 9358.2 11888.5 12675.7 13961.2 True False 8080.414863743087 8405.288245646361 9311.257704613008 9636.816260454234 8726.38783456224 8947.833523802483 9033.678399690725 9171.543359634126 11388.867688372393 11875.35413875151 12244.060907338582 0.6599456605855352 0.6864788005594271 0.760471364450027 0.7870604641208805 0.7127037263700644 0.7307896940009113 0.7378008381415608 0.7490605795775717 0.9301544458625143 0.9698868887228351 1.0 13.579794506143847 -8.807483158817236 2.260784074377853 0.973197047207673 0.725965954463548 0.9068276220945382 0.034237059161096595 0.06305840273722667 0.6295574779043163 0.007260838628268894 0.007736345406187753 1.5578184431433124e-09 8.807483158817236 -0.24723109274412503 SSELEGDTITLKPRPSADLTNSSAPS(ph)PSHK ddPTM_A549_PD325901_60min_R1 1 SSELEGDTITLKPRPSADLTNSSAPSPSHK 30 2 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 SSELEGDTITLKPRPSADLTNSS(0.002)APS(0.992)PS(0.006)HK 122.04 1.794e-21 8351100.0 1141.1 905.17 902.96 1371.4 1252.2 1379.1 1265.4 1431.0 1649.8 1462.3 1472.4 True False 1256.9436319665786 981.4518525943911 964.2402955395798 1456.1082633246222 1164.249791855484 1367.8690668391469 1313.555489453449 1402.4575824022163 1580.4646433340429 1369.9701284423206 1291.30413431262 0.9733908523693127 0.7600470148861037 0.7467181974545904 1.1276261142768895 0.9016077319966387 1.0592927184944572 1.0172316920155093 1.0860784420463154 1.2239290507463196 1.0609198035066896 1.0 10.334613115972974 -6.773339055681116 0.8630875637899251 1.1017376054799262 0.82729541104561 0.42473573792109565 0.10562040583439902 0.4641911201239426 0.6354582861023687 0.019846652354319233 0.07323806074340963 1.6852368395991173e-07 6.773339055681116 -0.27444219443431617 SSEMS(ph)PVPMR ddPTM_A549_MK2206_60min_R1 11 SSEMSPVPMR 10 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.128)S(0.128)EMS(0.743)PVPMR;S(0.19)S(0.19)EMS(0.619)PVPMR;S(0.137)S(0.17)EMS(0.693)PVPMR;S(0.147)S(0.147)EMS(0.705)PVPMR;S(0.142)S(0.142)EMS(0.717)PVPMR;S(0.094)S(0.094)EMS(0.812)PVPMR;S(0.16)S(0.198)EMS(0.643)PVPMR;S(0.1)S(0.1)EMS(0.8)PVPMR;S(0.049)S(0.049)EMS(0.903)PVPMR;S(0.056)S(0.056)EMS(0.889)PVPMR;S(0.068)S(0.046)EMS(0.886)PVPMR 64.82 0.0061688 80776400.0 9910.03 10550.310000000001 11512.189999999999 10566.91 13462.47 10054.210000000001 10297.93 10727.3 15887.489999999998 16827.22 16323.419999999998 True False 11582.600787028474 11087.275714982501 13144.79164950367 13155.80342436661 11482.158496626174 11118.139828755553 12168.930582434985 12247.927625978438 12288.998882108202 13025.939314988154 12269.864310526662 0.9439876834735194 0.9036184455169903 1.0713070101538436 1.0722044752426378 0.9358015872086953 0.9061338860297736 0.9917738513208265 0.9982121493772834 1.0015594770322866 1.061620486203163 1.0 13.582831674221604 SSEMS(ph)PVPMR ddPTM_A549_PD325901_60min_R1 10 SSEMSPVPMR 10 0 E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.117)S(0.117)EMS(0.765)PVPMR;S(0.18)S(0.18)EMS(0.64)PVPMR;S(0.005)S(0.005)EMS(0.991)PVPMR;S(0.169)S(0.169)EMS(0.661)PVPMR;S(0.031)S(0.031)EMS(0.939)PVPMR;S(0.163)S(0.113)EMS(0.724)PVPMR;S(0.022)S(0.022)EMS(0.956)PVPMR;S(0.032)S(0.018)EMS(0.95)PVPMR;S(0.034)S(0.034)EMS(0.932)PVPMR;S(0.17)S(0.17)EMS(0.66)PVPMR 63.076 0.0019004000000000002 109977400.0 18477.55 17063.870000000003 17501.57 18386.239999999998 20784.48 20734.04 18860.469999999998 19679.79 21872.949999999997 22586.32 22789.760000000002 True False 20353.37727354663 18501.902210556986 18689.331785690003 19521.91628661927 19324.649827363428 20565.188852589054 19578.215506695196 19287.261149953414 20953.70597673254 21160.21590059452 19986.76399619151 1.018342803138366 0.925707744089165 0.9350854289994752 0.9767422225198229 0.9668723676852218 1.0289403955791825 0.9795590476990592 0.9650016958037136 1.048379116335455 1.0587114504692514 1.0 14.286757287621784 -7.464884123910416 0.7857257113985517 1.0196393831915027 0.9571182077895294 0.33054242216399354 0.03411800378897909 0.5213223860162681 0.6404877513615148 0.006499724399369758 0.014575543421681776 3.428592541833099e-08 7.464884123910416 -0.06252117540197333 SSEPVKETVQTTQS(ph)PTPVEK ddPTM_A549_MK2206_60min_R1 2 SSEPVKETVQTTQSPTPVEK 20 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SSEPVKETVQTTQS(0.999)PTPVEK;SSEPVKETVQT(0.002)T(0.013)QS(0.983)PT(0.001)PVEK 304.06 3.8935999999999986e-163 247060000.0 22883.2 24440.5 24795.2 23111.6 31922.0 25564.2 24724.8 27746.1 33563.0 34394.0 33727.0 True False 26745.324719474094 25684.417056184124 28311.532202628132 28773.943037519162 27226.316086817715 28269.386675857426 29216.976117004917 31679.194643867555 25961.034089097615 26624.3715123296 25351.65508215392 1.0549735168297252 1.0131258481133427 1.1167528159752296 1.1349926836837698 1.0739462965470623 1.115090379079724 1.1524681927994498 1.2495907877102608 1.0240370502426352 1.0502024986554663 1.0 14.629792316161536 -8.967177811835736 24.9982462978905 1.0106044764044182 1.1129008229505002 0.3120320179703352 0.05820491806370842 135.17204788771917 102951.30672581974 0.010355708838045544 0.010953557285697354 1.0785050628569329e-09 8.967177811835736 0.102296346546082 SSEPVKETVQTTQS(ph)PTPVEK ddPTM_A549_PD325901_60min_R1 1 SSEPVKETVQTTQSPTPVEK 20 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SSEPVKET(0.001)VQT(0.009)T(0.063)QS(0.925)PT(0.002)PVEK 313.15 7.496999999999997e-164 262390000.0 35964.0 38880.0 35227.0 32868.0 44032.0 35735.0 35846.0 40878.0 37213.0 38652.0 42276.0 True False 39615.03880470253 42156.55404937189 37617.716057159516 34898.18171135602 40939.34422215356 35443.98600790147 37210.139145683854 40062.656221829384 35649.06702169339 36211.50612360839 37076.3200096443 1.068472782476736 1.1370209890950913 1.0146022055957653 0.9412525758294861 1.1041911444152064 0.9559736780425288 1.0036092885163561 1.0805456477721702 0.9615049986735561 0.9766747647606085 1.0 15.178210436692394 -5.8686274700256105 5.8022358311932845 0.9942985323486888 1.1017672101579092 0.3552712640757383 0.05022760221350648 0.1353406475341196 6.374799103255405 0.00657892515490649 0.02117387300735078 1.353232844218259e-06 5.8686274700256105 0.10746867780922043 SSEPVQADES(ph)QSPRDR ddPTM_A549_MK2206_60min_R1 1 SSEPVQADESQSPRDR 16 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 SSEPVQADES(0.5)QS(0.5)PRDR 47.288000000000004 0.022064 1533100.0 147.99 259.02 0.0 206.0 0.0 133.82 0.0 176.39 172.72 195.21 124.18 True False 172.9670939918793 272.2030116361289 0.0 256.47000924769145 0.0 147.9807435774732 0.0 201.39382267171948 133.59919577716354 151.11192542076697 93.34267880635313 1.8530333198462559 2.9161688427737955 0.0 2.7476178370642117 0.0 1.5853492257756079 0.0 2.157574919073483 1.4312766409278417 1.6188942438031029 1.0 6.544464966144688 -5.740610041349195 24.999095617663826 1.1787523003486502 2.3846010846016896 0.21865412903056136 0.8846008236318446 238.23049522696178 285916.58587367827 0.1023983792463962 0.3957227353785428 1.8171465699420611e-06 5.740610041349195 1.2058487842530394 SSEPVQADES(ph)QSPRDR ddPTM_A549_PD325901_60min_R1 2 SSEPVQADESQSPRDR 16 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 SSEPVQADES(0.644)QS(0.356)PRDR;SSEPVQADES(0.5)QS(0.5)PRDR 158.44 7.2377e-21 22438600.0 1659.1799999999998 1383.35 1180.08 1865.73 1798.26 1287.77 1507.32 1683.31 1788.46 1339.15 1482.23 True False 1827.6187321762409 1499.929759367247 1260.1673251975142 1980.9719047197352 1671.9564212602177 1277.2828280787826 1564.6818874371527 1649.7350615188511 1713.2972457371832 1254.5958404592318 1299.9251066301238 1.4059415599057778 1.1538585967122426 0.969415329214099 1.5239123351153139 1.2861944220729251 0.9825818591887665 1.2036707956917412 1.269100083616018 1.3179968884351112 0.9651293248051791 1.0 10.34421279144983 -10.912582640979332 1.1443327879590086 0.998901290761166 1.2345860711670171 0.2760859806766469 0.15601225303728586 0.5893624989375156 1.3605550224124696 0.11058408650945692 0.025741046582867418 1.2229743796962273e-11 10.912582640979332 0.23568478040585117 SSEPVQADESQS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SSEPVQADESQSPR 14 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 SSEPVQADES(0.133)QS(0.867)PR;SSEPVQADES(0.462)QS(0.538)PR 113.59 4.7423e-06 6897700.0 820.45 982.75 904.53 1062.76 1424.45 1070.0900000000001 1050.59 984.94 1391.56 1574.48 1316.72 True False 958.9219019233553 1032.7677773353628 1032.8059553156747 1323.1362477091097 1214.9152919575042 1183.3262135317466 1241.4686039427713 1124.5582612522444 1076.3738818646932 1218.803874476149 989.7420843767217 0.9688603900552789 1.04347162118072 1.0435101948464403 1.336849537465449 1.2275069547260715 1.195590479793463 1.2543354713713841 1.1362134428793351 1.087529669451741 1.2314358394123217 1.0 9.950908813888026 -9.336104068768439 1.1251832367228671 1.0215063131356314 1.1561379231902504 0.0 0.11898624205491792 0.4743262770079714 1.2548131692955458 0.02722837401426053 0.022107844335251675 4.612070435676958e-10 9.336104068768439 0.134631610054619 SSEPVQADESQS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SSEPVQADESQSPR 14 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 SSEPVQADES(0.007)QS(0.993)PR;SSEPVQADES(0.014)QS(0.986)PR 104.95 2.2329000000000003e-05 9867400.0 1897.98 1954.7799999999997 1784.98 1833.44 1835.4 1930.39 2398.3999999999996 2104.1 1841.3899999999999 2351.6000000000004 2071.1 True False 2090.661532380971 2119.5161709010067 1906.1194767567097 1946.6874247556466 1706.487835786262 1914.6695438587644 2489.6724244548395 2062.1320748654816 1764.0027819062152 2203.119574673434 1816.3678297846145 1.151012200336582 1.1668981007841015 1.0494127045746775 1.0717473591163995 0.939505648472434 1.0541199378574144 1.3706873594816231 1.135305328056823 0.9711704606194171 1.2129258944949937 1.0 10.826840674774582 -8.762643749566553 24.98209847173888 0.9863860446950411 1.1156145729356381 0.0 0.12142074666536282 34.05021963641464 706298.0045827152 0.018112110188293448 0.0198103742420585 1.7272541723332957e-09 8.762643749566553 0.12922852824059705 SSEPVQADESQS(ph)PRDR ddPTM_A549_MK2206_60min_R1 1 SSEPVQADESQSPRDR 16 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 SSEPVQADES(0.009)QS(0.991)PRDR 150.23 2.7399000000000002e-15 15498000.0 727.06 1020.5 792.27 709.0 868.85 1187.7 844.04 955.67 1165.6 1419.9 1737.7 True False 849.769953089639 1072.4390910920763 904.6257992747065 882.7050318282195 741.0433159586354 1313.3816256685463 997.3911425692759 1091.1391491166285 901.5934610807197 1099.1436038366223 1306.1811319197932 0.6505758905280371 0.8210492900902889 0.6925730108695641 0.6757906773089282 0.5673357988791861 1.0055126303487252 0.7635932859505746 0.8353658787835181 0.6902514812440903 0.8414940140967493 1.0 10.351139258118195 -10.927687078466192 0.7726515757002572 1.0321392572037742 0.7431099599021108 0.20217464659895945 0.11937311478426656 0.6915733696012334 0.591348720123407 0.13282869071869957 0.020235931956064896 1.1811713967224627e-11 10.927687078466192 -0.2890292973016634 SSEPVQADESQS(ph)PRDR ddPTM_A549_PD325901_60min_R1 1 SSEPVQADESQSPRDR 16 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 SSEPVQADES(0.041)QS(0.959)PRDR 130.36 1.293e-10 17622000.0 794.56 984.07 767.6 1103.2 1194.8 1016.0 893.92 878.69 878.32 992.07 1261.9 True False 875.2231462758427 1067.001032493966 819.6939519537752 1171.3421584510147 1110.8813698362342 1007.7260328537261 927.9386147717936 861.1638386310296 841.4072648400756 929.4305308922741 1106.6942998431769 0.7908445416226192 0.9641334853221567 0.7406688116762952 1.0584152810916245 1.0037834025111096 0.9105730760486659 0.8384778117166469 0.7781406651801316 0.7602887852221761 0.8398258950316978 1.0 10.112041048780299 -7.615946243473574 8.763757994085292 0.8708099698557416 0.9174978774066438 0.06948719574217055 0.10281811845778914 0.9328993112933955 79.01205905655043 0.018724665800075004 0.02778638705188901 2.4213287377807607e-08 7.615946243473574 0.04668790755090224 SSEQGLDEHINVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SSEQGLDEHINVSPK 15 0 O95171-2;O95171;O95171-3 O95171-2 SCEL Sciellin 1 SSEQGLDEHINVS(1)PK;SSEQGLDEHINVS(1)PK 154.26 6.7826e-20 40054000.0 3610.8 4374.7 3761.3999999999996 3683.1 5621.5 4306.2 3472.6000000000004 4653.6 6642.299999999999 6574.3 6757.7 True False 4220.214764415687 4597.353544145521 4294.823079747914 4585.45966534064 4794.584796756018 4761.8792257757805 4103.526469937525 5313.262051052295 5137.829655573495 5089.161063950351 5079.5765869680545 0.830820185927089 0.9050662915370339 0.84550808639573 0.9027247816491044 0.9438945775631773 0.9374559363850631 0.8078481345207704 1.0460049100713973 1.0114680953437916 1.0018868653357615 1.0 12.31049252942725 -8.273752207832503 24.997806689902838 1.0086110122964642 0.8867155239402862 0.7015126606141033 0.0415662951552947 322.95747617086204 655674.9000662492 0.006587012714108944 0.00799160699428147 5.324119469407988e-09 8.273752207832503 -0.12189548835617803 SSEQGLDEHINVS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SSEQGLDEHINVSPK 15 0 O95171-2;O95171;O95171-3 O95171-2 SCEL Sciellin 1 SSEQGLDEHINVS(1)PK 154.55 6.6335e-20 30979000.0 5416.6 4412.0 4879.9 6153.7 6394.6 6557.6 6031.9 7448.9 6491.4 7084.1 8469.8 True False 5966.489244509834 4783.814723915346 5211.079359222552 6533.800072933296 5945.465356172401 6504.197079765355 6261.447255282331 7300.3258459509925 6218.589032451573 6636.808717019928 7428.068294485886 0.8032356472730557 0.6440186781086192 0.7015389671485542 0.8796095854131502 0.8004053167612806 0.8756242971801493 0.842944222784061 0.9828027363951781 0.8371744558498269 0.8934770728948012 1.0 12.858771364295029 -2.0000000000073896 0.08247332444133286 1.1192824966279058 0.010691032550322851 0.5194099946935978 0.07000415528100466 77.253163989311 0.44955480525624975 0.8638321900545979 9.749155475507639 0.009999999999829846 2.0000000000073896 -1.108591464077583 SSES(ph)PRDSVVR ddPTM_A549_MK2206_60min_R1 3 SSESPRDSVVR 11 1 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 S(0.012)S(0.086)ES(0.892)PRDS(0.01)VVR;S(0.015)S(0.015)ES(0.969)PRDS(0.001)VVR;S(0.031)S(0.031)ES(0.927)PRDS(0.011)VVR 67.964 0.0012116 14190200.0 1997.1999999999998 1975.3300000000002 1950.87 1852.35 1973.33 1499.56 1823.12 1978.45 2790.55 2934.92 3101.4799999999996 True False 2334.2785331480577 2075.8658596834025 2227.532701012339 2306.175833155151 1683.0557710544444 1658.2424438726339 2154.357305152481 2258.9013462490134 2158.494880592659 2271.9195336095345 2331.2969195065884 1.0012789506203699 0.8904339221289551 0.9554907752736144 0.9892244157570652 0.7219396881503441 0.711296115907705 0.9241024972522349 0.9689462236011973 0.9258772928201258 0.974530320269277 1.0 11.186917045894115 -9.416360354249472 0.755977905944039 0.9869391644993084 0.8869763755476743 0.13491605838877252 0.09209378580119688 0.8316495340485659 1.029848752708253 0.03356888394926449 0.02276563683381706 3.8338899786686886e-10 9.416360354249472 -0.09996278895163413 SSES(ph)PRDSVVR ddPTM_A549_PD325901_60min_R1 4 SSESPRDSVVR 11 1 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 S(0.007)S(0.01)ES(0.978)PRDS(0.005)VVR;S(0.003)S(0.003)ES(0.992)PRDS(0.002)VVR;S(0.004)S(0.004)ES(0.99)PRDS(0.001)VVR;S(0.004)S(0.028)ES(0.93)PRDS(0.039)VVR 71.555 0.0014585999999999998 23692100.0 3128.29 3371.24 2931.7200000000003 3079.63 3782.86 3374.5400000000004 3262.21 3328.91 3583.2700000000004 2986.76 3685.4900000000002 True False 3445.8716978746206 3655.3462261678073 3130.684149064518 3269.851750752811 3517.164963758533 3347.058865065173 3386.355186699808 3262.5122785706253 3432.6776230570863 2798.175463876348 3232.198094246002 1.0661078304603306 1.1309165216931163 0.9685929072966784 1.011649550989415 1.0881650385289914 1.0355364267504668 1.0476941969393023 1.009378813872389 1.0620257555277879 0.8657190500971131 1.0 11.658299905037826 SSES(ph)PSSSPSSPAR ddPTM_A549_PD325901_60min_R1 2 SSESPSSSPSSPAR 14 0 Q9Y3R5-2;Q9Y3R5 Q9Y3R5-2 DOPEY2 Protein dopey-2 1 S(0.08)S(0.08)ES(0.611)PS(0.098)S(0.098)S(0.022)PS(0.005)S(0.005)PAR;S(0.014)S(0.014)ES(0.872)PS(0.04)S(0.04)S(0.015)PS(0.003)S(0.003)PAR 61.375 0.0065738 4521900.0 852.02 815.38 741.8 881.8399999999999 825.25 973.74 911.01 1081.96 1022.0 797.49 769.16 True False 938.5164431760275 884.0949341763594 792.143008805772 936.3092539960504 767.2872869579447 965.810184282468 945.6789840738 1060.3794590187997 979.048894100735 747.1363452995054 674.5581961069645 1.391305373787508 1.310628110782259 1.174313815142144 1.3880333222540522 1.1374664059915687 1.4317670289329933 1.4019234953063175 1.5719614188049325 1.45139277789679 1.1075936066174967 1.0 9.39779910383501 -10.800692434432197 1.0802132361688352 1.0026893805404762 1.362831007870705 0.4907257007735222 0.1197366213002144 0.3096220427513388 0.6489268537944302 0.08252828110503589 0.021262135595513137 1.5823682692596216e-11 10.800692434432197 0.3601416273302289 SSES(ph)SCGVDGDYEDAELNPR ddPTM_A549_MK2206_60min_R1 1 SSESSCGVDGDYEDAELNPR 20 0 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 S(0.289)S(0.289)ES(0.333)S(0.089)CGVDGDYEDAELNPR 66.335 0.0015283 1346800.0 227.17 222.28 0.0 265.09 517.86 539.95 354.92 552.67 405.28 465.97 232.54 True False 265.5107422267397 233.5931025653569 0.0 330.0370619003421 441.6834800049936 597.0871506101978 419.40436984110664 631.0126649808902 313.4847270991711 360.70705336978017 174.79390022249444 1.5189931793316136 1.3363916147418027 0.0 1.8881497665550073 2.526881541305369 3.415949583195798 2.399422229879009 3.610038246058225 1.793453471203158 2.063613506596269 1.0 7.4495110298060006 SSES(ph)SCGVDGDYEDAELNPR ddPTM_A549_PD325901_60min_R1 1 SSESSCGVDGDYEDAELNPR 20 0 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 S(0.06)S(0.06)ES(0.659)S(0.22)CGVDGDYEDAELNPR 98.507 6.851699999999999e-07 1874200.0 535.27 315.81 487.97 460.01 520.12 504.43 647.66 444.91 133.66 615.14 645.42 True False 589.6102163550529 342.4244170352914 521.0865786019853 488.42377294148946 483.58856551659056 500.32208932323346 672.3070557131506 436.03592102485686 128.0427350151705 576.299955419551 566.0374316544763 1.0416452753516237 0.6049501285355205 0.9205867835964421 0.8628824625853291 0.8543402582106714 0.8839028328229763 1.1877431033987589 0.7703305411275774 0.2262089534271844 1.0181304683951347 1.0 9.144753650387843 -8.524794141487796 24.999776758476468 0.6274234718038817 0.8983174645862153 0.025099128466702147 0.2424695126351272 90.36805542784703 1179473.7474381477 0.05010552423232041 0.057004964495281814 2.9867980458396367e-09 8.524794141487796 0.2708939927823336 SSESPRDS(ph)VVR ddPTM_A549_MK2206_60min_R1 1 SSESPRDSVVR 11 1 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 SSES(0.004)PRDS(0.995)VVR 53.869 0.0055788999999999995 2102800.0 615.68 707.93 554.38 375.64 564.82 443.61 400.75 367.29 531.19 764.61 926.45 True False 719.591732069195 743.960613186491 632.9994201495846 467.6718168631202 481.7357262125295 490.55251575551415 473.56108760797747 419.3544822784502 410.8763131361249 591.8840699552921 696.3868962807686 1.0333217582242826 1.0683150661791625 0.9089766386046019 0.6715689501925446 0.6917644900921625 0.7044252532255197 0.6800258450254463 0.6021860613950657 0.5900115515247549 0.8499356796005203 1.0 9.443745246226385 -5.996062358067608 3.7686421160921264 0.7564726540340316 1.0466953148803164 0.5534943590514511 0.113213695227647 0.19319165186789686 6.066570605326865 0.02323238269989013 0.07481734673005061 1.0091079831495596e-06 5.996062358067608 0.2902226608462848 SSESPRDS(ph)VVR ddPTM_A549_PD325901_60min_R1 1 SSESPRDSVVR 11 1 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 SSES(0.007)PRDS(0.993)VVR 70.889 0.00078118 2874200.0 776.52 888.69 792.46 831.44 1070.5 906.61 770.48 829.27 812.4 1043.8 884.66 True False 855.3517387561895 963.5830251578258 846.2411010490997 882.7961604627557 995.3117730245139 899.2268687455875 799.8010380228341 812.72955930027 778.257653197101 977.8942898639772 775.8524283217882 1.1024670511199697 1.2419668869788927 1.090724305496557 1.1378403008575904 1.2828622257165945 1.1590179213470595 1.0308674804986406 1.0475311149805242 1.0031001061381162 1.2604127462476553 1.0 9.599638459230233 -7.7895051751692685 3.77677489816317 1.006390001440382 1.1739104826751376 0.08687368868715728 0.09347604829216752 0.09261211604137008 2.823164222255693 0.008097379011691639 0.011677990425430943 1.6236590024119803e-08 7.7895051751692685 0.1675204812347557 SSESPSS(ph)SPS(ph)SPAR ddPTM_A549_MK2206_60min_R1 2 SSESPSSSPSSPAR 14 0 Q9Y3R5-2;Q9Y3R5 Q9Y3R5-2 DOPEY2 Protein dopey-2 2 S(0.019)S(0.021)ES(0.045)PS(0.409)S(0.469)S(0.055)PS(0.523)S(0.458)PAR;S(0.005)S(0.005)ES(0.042)PS(0.403)S(0.462)S(0.105)PS(0.523)S(0.455)PAR 50.563 0.029407 3001400.0 188.09 166.64 264.91 306.15999999999997 269.76 0.0 136.11 147.65 241.53 216.34 163.79 True False 219.8349936410067 175.12126422301188 302.4782214218163 381.1692137440447 230.07866134891114 0.0 160.83942516362288 168.5798396591609 186.82384064415425 167.46864374534465 123.11642262596702 1.7855862682826227 1.422403774312366 2.456847063699683 3.096006248508805 1.86878936572012 0.0 1.3064010611505499 1.3692717515949413 1.517456702033433 1.3602461814060467 1.0 6.943879407005418 -7.013022093394075 24.994471682083212 1.177714012196564 2.1954110615125546 0.4748616614670702 0.5448525637215459 460.26296663020884 883425.6683290652 0.08209603132011316 0.14668661725945084 9.70460596796017e-08 7.013022093394075 1.0176970493159907 SSESPSS(ph)SPS(ph)SPAR ddPTM_A549_PD325901_60min_R1 1 SSESPSSSPSSPAR 14 0 Q9Y3R5-2;Q9Y3R5 Q9Y3R5-2 DOPEY2 Protein dopey-2 2 S(0.003)S(0.003)ES(0.028)PS(0.387)S(0.545)S(0.102)PS(0.496)S(0.437)PAR 50.563 0.029407 779930.0 107.48 150.25 156.69 174.04 158.23 174.06 163.41 110.09 152.11 176.74 205.47 True False 118.3912904774059 162.91209480242082 167.32392565351364 184.79005552648172 147.1164706638662 172.64251306940912 169.6286569713831 107.89416858606573 145.71734567677382 165.58060623736296 180.19849258164487 0.6570048882277127 0.9040702420338401 0.9285534149388182 1.0254805846544832 0.8164134369615231 0.9580685753582968 0.9413433738605068 0.598751782216939 0.8086490824042369 0.9188789754295043 1.0 7.493443132368564 -10.837438513759341 1.191274727646525 0.9967561886850606 0.8528918235149469 0.09498806276943095 0.12385844989405889 0.6813482308337889 1.7754544718429643 0.07614096655648266 0.020526750591601292 1.4539902230480624e-11 10.837438513759341 -0.1438643651701137 SSESPSSSPS(ph)SPAR ddPTM_A549_MK2206_60min_R1 1 SSESPSSSPSSPAR 14 0 Q9Y3R5-2;Q9Y3R5 Q9Y3R5-2 DOPEY2 Protein dopey-2 1 SSES(0.002)PS(0.028)S(0.028)S(0.028)PS(0.457)S(0.457)PAR 48.64 0.029294999999999998 737330.0 108.7 235.73 126.97 169.78 157.07 103.6 143.15 139.98 250.57 319.66 228.85 True False 127.04590254015322 247.72765011576206 144.97625523358124 211.3761076217138 133.9652110693708 114.56288323588569 169.15850203638678 159.82259367077094 193.8162950780678 247.4485839864883 172.02022906131356 0.7385521065366677 1.4401076633112955 0.8427860840826286 1.2287863396948073 0.7787759137422221 0.6659849475903894 0.9833640087532568 0.9290918547364858 1.12670641200568 1.4384853766139891 1.0 7.4264344212740445 -8.747999491416339 24.970223919732632 1.0598335869160145 0.9587383849178203 0.10268270111570055 0.24075163540400343 602.8170095602359 1119984.0432245939 0.0346794105410481 0.03921490111732256 1.7864896669323356e-09 8.747999491416339 -0.10109520199819422 SSETGAFRVPS(ph)PGMEEAGCSR ddPTM_A549_PD325901_60min_R1 3 SSETGAFRVPSPGMEEAGCSR 21 1 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 SSETGAFRVPS(0.998)PGMEEAGCSR;S(0.001)S(0.002)ETGAFRVPS(0.997)PGMEEAGCSR;SSETGAFRVPS(1)PGMEEAGCSR 93.236 5.3342e-07 66953000.0 13526.7 13397.0 13682.0 14443.5 14879.199999999999 15244.5 14420.4 15236.9 14249.8 14872.599999999999 15661.100000000002 True False 14899.920626169767 14526.012206775582 14610.542796549713 15335.642191431503 13834.136322453382 15120.353846297867 14969.176213145663 14932.988076383186 13650.930461014344 13933.541497826196 13734.883983892527 1.0848231877053733 1.0575999203059046 1.0637543654306878 1.1165469041759837 1.0072262960995704 1.1008723382032304 1.0898655009172733 1.0872307399098329 0.9938875695654482 1.0144637198367779 1.0 13.745557103827812 -8.765322626320161 24.939431528560625 0.9971135686549927 1.0753207721327236 0.5856864585802812 0.027304021624598954 39.99787295085653 256878.1943229276 0.00430588304500247 0.0046688184697112585 1.716632670635582e-09 8.765322626320161 0.07820720347773091 SSEYPIS(ph)QNPEGLSADKFEVSADSSTSK ddPTM_A549_PD325901_60min_R1 2 SSEYPISQNPEGLSADKFEVSADSSTSK 28 1 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;H0Y881;A0A2R8Y7V5 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.001)S(0.001)EYPIS(0.998)QNPEGLSADKFEVSADSSTSK;S(0.009)S(0.009)EY(0.004)PIS(0.977)QNPEGLS(0.002)ADKFEVSADSSTSK 83.559 4.856e-08 2693400.0 765.49 1036.0 1252.4 1024.3 1622.1 1104.3 916.36 1398.9 1332.5 1073.3 1538.4 True False 843.2019812760458 1123.3073558423168 1337.3953952930017 1087.5686846459166 1508.1692919412083 1095.3069469294987 951.2325812514331 1370.9978420841796 1276.4996588935708 1005.5316548294765 1349.1865527210896 0.6249706384750461 0.8325811975940531 0.991260543321969 0.8060921467475848 1.1178359945105267 0.8118276488306551 0.7050415521359532 1.016166251671498 0.9461253940895563 0.7452873383606462 1.0 10.397874128928809 -5.342105372657906 2.3101672650221756 0.9474606696894091 0.5752392925792026 0.2342455591676874 0.1270273511733389 0.3495296787886898 2.474450021176621 0.015162576252386008 0.24272633535712665 4.548776800106461e-06 5.342105372657906 -0.37222137711020653 SSFASSS(ph)ASDASKPSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 2 SSFAS(0.018)S(0.121)S(0.687)AS(0.057)DAS(0.117)KPS(0.006)S(0.994)PR 122.47 6.3342e-11 25708000.0 5468.5 6434.6 6283.0 6379.7 7891.9 7103.6 6250.9 6686.0 6180.2 7181.7 7517.5 True False 6023.658094303069 6976.8663242306675 6709.4021627482725 6773.7595796500555 7337.600169576985 7045.750636791072 6488.781420123727 6552.642484934466 5920.467686224424 6728.246236363411 6592.895157358813 0.9136590148228921 1.0582401445354817 1.0176715998978716 1.0274332319829729 1.1129556885774154 1.0686884090560418 0.9842081915834993 0.9938945377616967 0.898007255525087 1.0205298394368554 1.0 12.68669642393764 -8.144684465951913 2.360099296991638 0.9527758600785518 1.0359248859952614 0.12681108405343544 0.05611900180147121 0.28459425003789157 3.1078245596373675 0.009674874122687234 0.012846376944930864 7.166639089672041e-09 8.144684465951913 0.0831490259167097 SSFASSSASDAS(ph)KPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 2 SSFAS(0.002)S(0.006)S(0.034)AS(0.125)DAS(0.833)KPS(0.611)S(0.39)PR 79.467 9.2645e-05 19189000.0 3447.9 3329.2 3087.2 2799.6 4827.1 3371.6 2394.8 2997.6 3843.3 4669.9 4503.3 True False 4029.82122693831 3498.6420598370787 3525.0113818784903 3485.502125678819 4117.039984420704 3728.3804741130543 2829.9041612067003 3422.51897976499 2972.7986864889567 3614.9663466135935 3385.0063252427935 1.190491490927795 1.0335703167662869 1.0413603530343933 1.0296885118608508 1.2162576931449027 1.1014397362597637 0.8360114839678245 1.0110820042616924 0.8782254450516365 1.0679348867551395 1.0 11.724942814293344 -7.735244826533882 24.962931071984215 0.9400095588258461 1.0981501226537165 0.4225788796838026 0.08214050828401685 138.62487693061263 132106.68083117588 0.011682940561598017 0.017325597166305974 1.839734588279309e-08 7.735244826533882 0.15814056382787034 SSFASSSASDAS(ph)KPSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 2 SSFAS(0.002)S(0.01)S(0.05)AS(0.127)DAS(0.811)KPS(0.021)S(0.979)PR 87.208 2.2534e-06 15406000.0 2501.9 2737.7 2936.9 2144.2 3404.7 2374.8 2612.2 2168.8 4166.5 4490.8 3153.1 True False 2924.1595544177485 2877.03723633785 3353.3965818343295 2669.5290962567947 2903.8731401788177 2626.099759735341 3086.8029271355203 2476.234041671441 3222.7944025333004 3476.3251610039442 2370.098248867065 1.2337714505360826 1.2138894401162938 1.414876612578104 1.1263368923768713 1.2252121369090514 1.1080130374302617 1.3023945014140441 1.0447811785250294 1.3597724921630714 1.4667430612489032 1.0 11.210731149783669 -11.02891064387202 1.3008709266315217 0.9991417912404696 1.2368049175661389 0.0 0.17188464337270362 0.3529038959990902 1.0576582771048608 0.07417313653084495 0.016429933451438228 9.355981537482291e-12 11.02891064387202 0.23766312632566922 SSFASSSASDAS(ph)KPSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 2 SSFAS(0.004)S(0.005)S(0.026)AS(0.115)DAS(0.849)KPS(0.063)S(0.937)PR 99.93 5.4081e-08 25432000.0 5594.3 5660.5 4841.6 5060.8 5801.7 6001.9 5491.9 5440.4 6277.7 5751.8 6814.8 True False 6162.229217694005 6137.53020052648 5170.1800909059375 5373.394122089281 5394.208606778443 5953.022516323605 5700.897259782992 5331.886954088766 6013.870100289809 5388.630366391673 5976.622802576502 1.0310554005579018 1.0269227962455003 0.8650671560997777 0.8990686378556179 0.9025512877361137 0.9960512337765864 0.953865995579536 0.8921237177273773 1.0062321647096835 0.9016179445135224 1.0 12.54511477873493 -8.804971671880292 24.99285448047045 1.0029430047209205 0.9447881608117733 0.0 0.06044374427459558 161.49613613870605 92717.765210485 0.009323952572406778 0.009926129072214804 1.5668532693329987e-09 8.804971671880292 -0.05815484390914716 SSFASSSASDASKPS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASS(0.001)S(0.001)ASDAS(0.009)KPS(0.494)S(0.494)PR 78.285 3.0179e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSFASSSASDASKPS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDAS(0.006)KPS(0.691)S(0.303)PR 209.23 1.9883e-55 8719600.0 1521.6 1104.1 1118.3 1023.0 1816.7 1331.5 1100.5 1402.7 1326.1 1244.7 1255.0 True False 1676.0717118572825 1197.1463818392865 1194.1945628841945 1086.188386598431 1689.1012592747625 1320.6567054574177 1142.3801297167076 1374.722048103138 1270.3686286369714 1166.1094295781697 1100.642956100473 1.5228114644875637 1.0876791380928115 1.0849972339033274 0.986867158489567 1.5346495881454327 1.199895659293949 1.037920720234387 1.2490172589426407 1.1542059317199727 1.0594802093765643 1.0 10.104130825314408 -14.999999843019111 0.14631113945878765 0.2534040475425557 1.26557640054355 0.15317897379173895 0.16893753112065055 81.21829403821681 0.7882345026542003 17.32654088796483 0.3403966997309795 1.0000003614619196e-15 14.999999843019111 1.0121723530009943 SSFASSSASDASKPSS(ph)PR ddPTM_A549_MK2206_60min_R1 4 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDASKPS(0.004)S(0.996)PR;SSFASSSAS(0.011)DAS(0.009)KPS(0.104)S(0.876)PR;SSFASSSASDASKPS(0.005)S(0.995)PR;SSFAS(0.004)S(0.004)S(0.004)AS(0.004)DAS(0.015)KPS(0.044)S(0.924)PR 170.04 8.416599999999999e-31 270050300.0 14812.789999999999 15742.94 13819.09 12659.39 18730.780000000002 14384.25 14462.91 13584.970000000001 21506.0 20984.100000000002 22988.8 True False 17312.826814054784 16544.188402466523 15778.844758098994 15760.941118301618 15975.507074514227 15906.381787507611 17090.63353606064 15510.681099725785 16634.92533802501 16243.77723590961 17280.046501397097 1.0018970037294193 0.9574157338713712 0.9131251328995712 0.9120890454216857 0.9245060233618354 0.9205057281658111 0.9890386310406547 0.8976064444312544 0.9626666998077852 0.9400308751829051 1.0 14.07681947941453 -9.64702374469562 0.8278037978960293 0.9951903339779113 0.9384305267195254 0.004496751390915876 0.035602675987433295 0.43770857960181003 0.6347050629955863 0.011034732897583216 0.006688987101742088 2.2541159668362847e-10 9.64702374469562 -0.05675980725838592 SSFASSSASDASKPSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDASKPS(0.006)S(0.994)PR;SSFASSSASDASKPS(0.029)S(0.971)PR 243.72 2.7845999999999995e-75 549680000.0 43291.0 41757.0 41172.0 40969.0 47172.0 43701.0 42136.0 42901.0 43624.0 46368.0 46087.0 True False 47685.8704508502 45276.00893620426 43966.179507348694 43499.562082650154 43858.80145456547 43345.113545020366 43739.50853770394 42045.305899816594 41790.63498654643 43440.31656678763 40418.591169563755 1.1798004104299136 1.120177809915806 1.0877712021901536 1.076226578510892 1.0851145521269996 1.072405353347901 1.0821631153398767 1.040246695473092 1.0339458594988302 1.0747607798734784 1.0 15.302731415564326 -2.000000000000176 0.14879364731962016 0.9837350740452383 1.613473032609306 0.6445420696407335 0.02654037295543846 13.300214282629627 0.12380627757408542 0.029611610137235508 1.8201919073434398 0.009999999999995951 2.000000000000176 0.6297379585640678 SSFFSDRGS(ph)GSR ddPTM_A549_MK2206_60min_R1 3 SSFFSDRGSGSR 12 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8YF89;A0A087WX09;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 S(0.001)SFFS(0.022)DRGS(0.958)GS(0.02)R;SSFFS(0.001)DRGS(0.99)GS(0.009)R;SSFFSDRGS(0.654)GS(0.346)R 77.726 0.00029219999999999995 79478800.0 4948.2 6110.6 5015.799999999999 4733.0 6919.4 4832.4 3982.4399999999996 5236.3 7761.5 7656.4 7311.2 True False 5783.3351881249855 6421.603439517141 5727.11586201935 5892.585212472442 5901.565426073757 5343.761360512492 4705.9977984616735 5978.561560496204 6003.532642568634 5926.813922399264 5495.627261145187 1.0523521544144618 1.1684932646212614 1.0421223256007224 1.0722316002276575 1.0738656654898353 0.9723660478747518 0.8563167723789605 1.087876101562678 1.0924199108288157 1.078459953844145 1.0 12.42406844188701 -6.4142667437774135 1.4698044897260727 1.0298294251584428 1.1021975703950928 0.15323728822334115 0.07073400867290154 0.6952520839692415 2.855605789680156 0.011261509191839787 0.03871479974388506 3.852416694582687e-07 6.4142667437774135 0.07236814523665003 SSFFSDRGS(ph)GSR ddPTM_A549_PD325901_60min_R1 2 SSFFSDRGSGSR 12 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8YF89;A0A087WX09;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A2R8Y645;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 SSFFS(0.02)DRGS(0.671)GS(0.309)R;SSFFS(0.01)DRGS(0.75)GS(0.24)R 71.781 0.00064187 172377000.0 16498.3 16537.6 14863.3 13916.0 19551.8 17603.1 15929.4 17268.7 16047.8 17254.5 17982.4 True False 18173.19527059346 17931.28159071225 15872.01291828367 14775.55971447093 18178.54901804827 17459.746189889203 16535.602033902152 16924.262231466917 15373.366773727766 16165.047925328605 15770.678799825617 1.152340714135552 1.1370012551971145 1.0064254760206754 0.9369006814490641 1.1526801888989888 1.1071017558281806 1.0485028731981398 1.0731473544216787 0.9748069166114623 1.025006477559314 1.0 13.944957137335855 -8.755379779043782 24.340787174970362 0.9881032648057664 1.0743637846345346 0.22369284661033517 0.06257449925644608 100.26361644578513 402747.516533882 0.010797624310864397 0.012085756171153731 1.7563870281790125e-09 8.755379779043782 0.08626051982876826 SSFLSS(ph)PER ddPTM_A549_MK2206_60min_R1 2 SSFLSSPER 9 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 SSFLS(0.003)S(0.997)PER;SSFLS(0.002)S(0.998)PER 160.0 8.9149e-06 38806000.0 7055.2 8063.5 6944.799999999999 6843.3 10071.8 7725.8 7506.9 7889.6 11787.400000000001 11622.9 11510.2 True False 8245.945276920778 8473.89770800682 7929.677068174964 8519.908807207406 8590.251562032778 8543.339028029011 8870.806559112485 9007.974960886666 9117.57272060988 8997.278817545372 8651.899674640734 0.953079160301658 0.9794262562757576 0.9165243895993559 0.9847442905723698 0.9928746154109195 0.9874523918799104 1.0253015976495174 1.0411557345364986 1.0538232138005557 1.039919457678984 1.0 13.078801220912341 -7.128746832460576 1.1262382839989151 1.0272182236199694 0.9541042095476948 0.7011054177699925 0.02136469150443542 0.24885796793999052 0.6202094332771 0.004193284303026245 0.009815547442384652 7.43452399596534e-08 7.128746832460576 -0.07311401407227458 SSFLSS(ph)PER ddPTM_A549_PD325901_60min_R1 2 SSFLSSPER 9 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 SSFLS(0.004)S(0.996)PER;SS(0.001)FLS(0.171)S(0.828)PER 120.22 0.00014232 61203000.0 6671.3 7092.8 7447.9 6727.9 8386.5 7251.0 7149.2 7495.3 6937.1 7864.0 8610.2 True False 7348.565464848511 7690.535148183764 7953.35928186103 7143.467102830482 7797.4611718543565 7191.950260061383 7421.266718192349 7345.800361550903 6645.557811415076 7367.465697921364 7551.199984554814 0.9731652558373807 1.0184520558207895 1.053257667407669 0.946004226803911 1.032612192473149 0.9524248165552179 0.9827930306933692 0.9727990751901638 0.8800664563258642 0.9756682001523918 1.0 12.882490210451191 -7.646587564321583 1.2422509179848236 0.9448750930503357 1.0056201480161568 0.17316108573304367 0.04069912907368644 0.5130734300929767 1.598991852589475 0.008622811743554176 0.014828052257638568 2.256381008385682e-08 7.646587564321583 0.060745054965821166 SSFSQHAR ddPTM_A549_PD325901_60min_R1 2 SSFSQHAR 8 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 86.794 0.0029308000000000003 1567120.0 393.02 518.54 306.48 429.35 688.05 540.56 511.47999999999996 288.82 589.73 549.79 588.25 False True 432.9191010739679 562.2391856162885 327.27957581395685 455.86997437540214 639.7237416436403 536.1578585820967 530.9446512925956 283.05925852509324 564.9456989413177 515.0761655722513 515.8989792239871 0.839154792911517 1.0898241870181757 0.6343869420060674 0.8836419390887721 1.2400174596311662 1.039269082076074 1.0291639888321549 0.5486718716731513 1.0950703949659029 0.9984050876530643 1.0 9.010944781700573 -5.544851794583449 0.2584467432600426 1.035229823782082 0.7693509642939669 0.0034506933300930687 0.19527353008476736 20.330728111122355 1.1531561219866158 0.11380731455451167 1.6932747065713178 2.8519913594315875e-06 5.544851794583449 -0.2658788594881152 SSFYVNGLTLGGQK ddPTM_A549_MK2206_60min_R1 2 SSFYVNGLTLGGQK 14 0 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 0 ; 248.77 5.169199999999999e-69 19673900.0 7275.9 9044.2 8675.7 7454.0 11239.699999999999 8293.300000000001 7635.5 8116.700000000001 11706.1 11044.3 11385.199999999999 False True 8503.89404132384 9504.511149098444 9906.044715523201 9280.230334622775 9586.355019140561 9170.891501352999 9022.771514487118 9267.267081351249 9054.687040800458 8549.384959400526 8557.940624465224 0.9936846274690342 1.110607278803406 1.1575266936538509 1.084399944081487 1.120170779373642 1.0716236421570262 1.0543157414171638 1.0828851809111903 1.0580450879637033 0.999000265900392 1.0 13.063047954148526 -9.703953912568078 0.43031750735164026 0.9946043392779057 1.095421562416 0.41034255451798496 0.03889906963965928 0.8046628390118754 0.31892832106650404 0.03312833447523696 0.013389302314939037 1.9771794477243412e-10 9.703953912568078 0.10081722313809427 SSFYVNGLTLGGQK ddPTM_A549_PD325901_60min_R1 2 SSFYVNGLTLGGQK 14 0 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 0 ; 243.4 2.9707e-57 39737000.0 10260.0 10000.4 10707.7 10171.4 12552.5 11344.5 11177.8 12074.099999999999 12170.8 11703.7 12194.4 False True 11301.587646987207 10843.168804406847 11434.388912630851 10799.664277074557 11670.855703774128 11252.114153256984 11603.17729572686 11833.272603551784 11659.303601097095 10964.726384634068 10694.566106670602 1.0567598100065025 1.0138951591166991 1.0691774494244133 1.0098272495915848 1.0912883783564233 1.0521337697130713 1.084960079725864 1.106475240371924 1.0902081940308688 1.0252614528975568 1.0 13.38459033110778 -4.8667859631697175 18.38181606806954 1.0513869240892317 2.5669529182052906 0.0 0.03571879081764036 3934.242186083819 644023.9872374296 0.005669649119105422 46854.911331333504 1.3589830400766023e-05 4.8667859631697175 1.5155659941160589 SSGAPQDSDSSATCS(ph)ADEVDEAEGGDKNR ddPTM_A549_MK2206_60min_R1 2 SSGAPQDSDSSATCSADEVDEAEGGDKNR 29 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SSGAPQDS(0.001)DS(0.019)S(0.019)AT(0.023)CS(0.937)ADEVDEAEGGDKNR;SSGAPQDSDS(0.014)S(0.034)AT(0.163)CS(0.789)ADEVDEAEGGDKNR 131.23 8.6894e-28 87716000.0 1151.81 1484.07 1329.01 1221.01 1725.3400000000001 1556.98 1450.1599999999999 1770.52 2085.31 2426.1000000000004 2534.8999999999996 True False 1346.2073689491617 1559.6028240245146 1517.4836021735996 1520.157504813222 1471.5447715440787 1721.738590160322 1713.6353008249148 2021.4966319900957 1612.9906145557952 1878.0423250003732 1905.4143703190896 0.7065168552936438 0.8185111062027606 0.7964060866820662 0.797809404869057 0.7722964592198636 0.9036032355901628 0.8993504654517439 1.0609223187770787 0.846530098482293 0.9856345969962783 1.0 10.895889059281934 -7.374629165551522 2.7522397770784672 0.9355354428528705 0.7814967537518063 0.6672258090765939 0.05994648437396824 0.17148308513895116 2.5194704856917145 0.01061849182472391 0.017872993220497426 4.2205673451678585e-08 7.374629165551522 -0.15403868910106422 SSGAPQDSDSSATCS(ph)ADEVDEAEGGDKNR ddPTM_A549_PD325901_60min_R1 2 SSGAPQDSDSSATCSADEVDEAEGGDKNR 29 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 SSGAPQDSDS(0.01)S(0.062)AT(0.062)CS(0.866)ADEVDEAEGGDKNR;SSGAPQDSDS(0.001)S(0.001)AT(0.04)CS(0.957)ADEVDEAEGGDKNR 141.69 4.8462e-36 110577000.0 2163.3 2340.3 3196.5 2372.1400000000003 2177.73 2485.3999999999996 2267.7 2126.7400000000002 2051.66 2208.23 2719.5 True False 2382.916623462712 2537.525294283565 3413.433712116002 2518.6617002791795 2024.7737575606477 2465.159726431744 2353.9985644330536 2084.320502304747 1965.4358650398372 2068.8019809411107 2385.0187403308673 0.999118616205144 1.0639435453373172 1.431197857859375 1.056034343751015 0.8489550724786994 1.0336018265792573 0.9869937391378693 0.8739220648704819 0.8240756484652098 0.8674153984442534 1.0 11.21978488694159 -6.527914019071004 13.674868896381598 0.9233859145407469 1.1694933167356003 0.4614318336935358 0.1174357351684955 0.36343279953347085 981.043981691908 0.01732661331215201 0.036565321781037816 2.965418420222866e-07 6.527914019071004 0.2461074021948534 SSGDPEQIKEDS(ph)LS(ph)EESADAR ddPTM_A549_PD325901_60min_R1 1 SSGDPEQIKEDSLSEESADAR 21 1 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 2 S(0.001)S(0.001)GDPEQIKEDS(0.998)LS(0.994)EES(0.006)ADAR 67.778 0.00030779 9366300.0 817.11 874.51 769.47 1222.7 928.95 768.69 824.93 880.39 669.41 887.88 793.81 True False 900.0624056754111 948.2080267931124 821.6908613989989 1298.2234020468247 863.7037567035234 762.4300434983571 856.3231625690169 862.8299307974056 641.2770256359811 831.8191052734512 696.1764023761889 1.2928654326738434 1.362022647646041 1.180291171310036 1.8647908742895183 1.2406392313148367 1.0951678926433464 1.2300376163946596 1.2393840524504924 0.921141571945235 1.1948395585289686 1.0 9.44330910301497 -8.038477748110408 0.8674181947934114 0.9626761699005291 1.3894710303239448 0.27458735025862735 0.19791445956452966 0.3439064894890771 0.5175019938878178 0.03729622402101252 0.05643321810639061 9.152131507365344e-09 8.038477748110408 0.42679486042341575 SSGDPEQIKEDS(ph)LSEESADAR ddPTM_A549_MK2206_60min_R1 4 SSGDPEQIKEDSLSEESADAR 21 1 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 SSGDPEQIKEDS(0.999)LS(0.001)EESADAR;SSGDPEQIKEDS(0.993)LS(0.006)EES(0.001)ADAR;SSGDPEQIKEDS(0.994)LS(0.006)EESADAR;SSGDPEQIKEDS(0.936)LS(0.063)EESADAR 189.86 2.7608999999999998e-45 99885900.0 7822.360000000001 8624.49 7867.85 7390.05 9746.289999999999 8094.67 7411.610000000001 7483.32 11719.73 10914.689999999999 11245.6 True False 9142.58312965955 9063.439702824795 8983.629437973797 9200.612581751948 8312.623651832291 8951.242606592925 8758.203599566223 8544.103526706345 9065.229867563086 8449.053948418572 8453.007157229227 1.0815775924004252 1.0722148383695038 1.0627731966712897 1.0884425401063749 0.9833924776371594 1.0589417990658618 1.0361050732195327 1.0107768002301063 1.0724266168176932 0.9995323310702187 1.0 13.045248956120275 SSGDPEQIKEDS(ph)LSEESADAR ddPTM_A549_PD325901_60min_R1 3 SSGDPEQIKEDSLSEESADAR 21 1 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 SSGDPEQIKEDS(0.999)LS(0.001)EESADAR;SSGDPEQIKEDS(0.984)LS(0.015)EESADAR;SSGDPEQIKEDS(0.958)LS(0.042)EESADAR 217.02 4.761899999999999e-68 77066400.0 10368.39 12236.869999999999 12433.5 13233.59 14726.48 11888.9 12660.15 12573.77 14118.2 12389.5 13929.56 True False 11420.9813199947 13268.113980199003 13277.312078709318 14050.998798636481 13692.142848397982 11792.080740152234 13141.938936149902 12322.976293418264 13524.861151363006 11607.224855594703 12216.312426756096 0.934895975235582 1.0860981216507903 1.086851057413154 1.1501833211028614 1.120808175993398 0.9652733433965955 1.075769714874556 1.0087312654536038 1.1071148705840999 0.9501414543207513 1.0 13.576521243552575 SSGEIVYCGQVFEKS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 SSGEIVYCGQVFEKSPLR 18 1 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 1 SSGEIVYCGQVFEKS(1)PLR;SSGEIVYCGQVFEKS(1)PLR 194.97 5.1906e-49 167322000.0 20181.7 26484.4 21062.1 19390.7 26675.1 27702.0 25237.9 27248.0 32408.0 27279.0 27459.0 True False 23587.877564807834 27832.34283598136 24049.02248842414 24141.42237048161 22751.228126291306 30633.407252900655 29823.299745330947 31110.48744350028 25067.639744941607 21116.654953911704 20640.17247015341 1.1428139759450622 1.348454954832773 1.1651560820627866 1.1696327831267475 1.102278973646687 1.4841643061460799 1.4449152393690865 1.507278463321341 1.2145072809440185 1.0230851987524479 1.0 14.333167405581714 -9.893340951116862 1.075095797194459 1.0328173089463077 1.289616043911042 0.3684757867281818 0.137423214553203 0.3690718727919812 0.8666965770176939 0.04792370572778201 0.02829321651613463 1.278377295768222e-10 9.893340951116862 0.25679873496473427 SSGEIVYCGQVFEKS(ph)PLR ddPTM_A549_PD325901_60min_R1 3 SSGEIVYCGQVFEKSPLR 18 1 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 1 SSGEIVYCGQVFEKS(1)PLR;S(0.001)S(0.001)GEIVY(0.006)CGQVFEKS(0.992)PLR;SSGEIVYCGQVFEKS(1)PLR 206.08 6.8617e-50 286948300.0 64109.85 72178.6 84041.2 66204.1 63752.4 53159.16 62914.130000000005 68679.5 43851.95 64419.68 62276.22 True False 70618.23477682298 78261.3439328188 89744.74121279005 70293.37689657975 59274.65135784023 52726.24942582333 65308.36164508296 67309.63349447463 42009.00504076392 60352.210410868654 54616.6397414848 1.2929802183195087 1.4329212544611079 1.6431758093792654 1.287032252978161 1.0852855766741243 0.9653880149967262 1.1957594233955977 1.2324015870084497 0.7691612892994479 1.1050150777589365 1.0 15.73705293536955 -7.065067416520984 0.6913362829401668 0.9123744457549086 1.4814819751765766 0.4676565792465356 0.16571982779111438 0.3994953097614002 0.35370375850442115 0.03344684319781588 0.11145149554924898 8.608601085377936e-08 7.065067416520984 0.5691075294216681 SSGEIVYCGQVFEKS(ph)PLRVK ddPTM_A549_PD325901_60min_R1 1 SSGEIVYCGQVFEKSPLRVK 20 2 M0R3D6;M0R1A7;Q02543;M0R0P7;M0R117 M0R3D6 RPL18A 60S ribosomal protein L18a 1 SSGEIVYCGQVFEKS(1)PLRVK 110.26 1.0251999999999999e-10 7734600.0 2446.8 2828.1 3134.6 2828.2 2389.2 3735.9 2847.1 2970.0 2602.4 2638.1 2791.8 True False 2695.197334761042 3066.433912217813 3347.332805881062 3002.8914906917703 2221.390834292544 3705.4760690336975 2955.4479484928984 2910.761020080073 2493.0301780897785 2471.5299157790387 2448.4262986783274 1.1007876104810355 1.2524101353890411 1.367136436856592 1.226457783235193 0.9072729023910834 1.5134113169074894 1.2070806256607616 1.1888293397482768 1.018217366573594 1.0094361088643684 1.0 11.257639054067315 -8.713517644967313 3.2348221041632 1.0070494167794626 1.2289997429238826 0.3077899381085606 0.14178748312859452 0.2011203146112704 4.241611766981842 0.023889702358880764 0.026442964061341754 1.934115275778525e-09 8.713517644967313 0.22195032614442 SSGFGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SSGFGSPR 8 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SS(0.001)GFGS(0.998)PR;SSGFGS(1)PR 78.939 0.0041876000000000005 133378000.0 9646.5 10358.4 9968.0 11074.7 11807.2 11769.6 10573.5 12467.5 11549.2 12057.0 12450.7 True False 10625.805578622032 11231.33872080796 10644.488422453409 11758.759066531413 10977.903004628717 11673.752279798447 10975.880328541214 12218.825931935462 11063.82728742486 11295.718962339508 10919.342831490165 0.9731176814028034 1.028572771652341 0.9748286675051445 1.076874244906064 1.0053629759631386 1.0690892721247518 1.0051777380675329 1.1190074458233634 1.0132319735870934 1.0344687529879468 1.0 13.414598411422638 -5.255175447630712 23.116778799983308 1.0207071128850917 0.9731176207190086 0.0885098243741349 0.040983239724356774 452.6903589619994 1670489.9021345805 0.005388886089113751 0.06768522881466471 5.55679726702091e-06 5.255175447630712 -0.0475894921660831 SSGGGYS(ph)GDR ddPTM_A549_MK2206_60min_R1 2 SSGGGYSGDR 10 0 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 SSGGGYS(1)GDR;SSGGGYS(1)GDR 143.73 4.4969000000000004e-08 120146000.0 10653.900000000001 12733.3 11429.400000000001 9693.6 17129.300000000003 13466.5 12393.099999999999 13747.2 19874.6 18338.6 18640.8 True False 12452.017857153065 13381.37058167833 13050.260782599777 12068.532435162237 14609.602661046503 14891.516091660762 14644.765851115226 15695.907699034318 15373.034833214533 14195.897523289152 14011.774900092356 0.8886824078990158 0.9550089604701064 0.9313781355789379 0.8613136109603566 1.0426660979937814 1.0627858496044358 1.0451756437379462 1.1201941089512408 1.0971511420093685 1.0131405638835649 1.0 13.774352096015807 -6.818544407053914 8.14173694157918 1.0538376164207959 0.9141214711331223 0.7649756335041262 0.038726053903602994 0.1127174949492765 14.317397547118544 0.00669046158871141 0.012708808678299148 1.5186426513319603e-07 6.818544407053914 -0.13971614528767362 SSGGGYS(ph)GDR ddPTM_A549_PD325901_60min_R1 2 SSGGGYSGDR 10 0 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 1 SSGGGYS(1)GDR;SSGGGYS(1)GDR 131.54 1.0975e-06 146557000.0 13475.5 13916.7 13030.1 12673.3 15017.4 14246.099999999999 14272.099999999999 13215.0 14336.2 15174.7 15916.0 True False 14843.52283986122 15089.509149662903 13914.400942356555 13456.100957847402 13962.629631217498 14130.0844848794 14815.232575492782 12951.416458033053 13733.699369478427 14216.566852269494 13958.432899836762 1.063408976235062 1.081031750336341 0.9968454942043873 0.9640122966815827 1.0003006592080108 1.0122973392697003 1.0613822254836387 0.9278560531092651 0.9838998022219985 1.0184930467685775 1.0 13.768849360170012 -5.767755913514358 22.55454696286432 0.9927354353614369 1.072220398672432 0.45664539569825324 0.03184209103620128 22.840748067494726 81564.14711847594 0.004084352300411458 0.013223283649894176 1.7070415278302402e-06 5.767755913514358 0.07948496331099497 SSGGGYSGDR ddPTM_A549_MK2206_60min_R1 2 SSGGGYSGDR 10 0 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 ; 68.22399999999999 0.01163 5121800.0 1704.68 1584.52 1582.12 1247.66 1489.6999999999998 1471.03 1314.37 1221.44 2064.73 2308.5 2141.8 False True 1992.3883085754223 1665.1652999678763 1806.4884061601445 1553.3367560095858 1270.5671033936576 1626.6934182093134 1553.174015519146 1394.5828605031186 1597.0719516962888 1787.0082466771184 1609.931949327164 1.237560574785846 1.0343078790776195 1.1220899162322526 0.9648462201515842 0.7892054716503163 1.0104112902965585 0.9647451348289978 0.8662371481514819 0.9920120862026189 1.1099899268562001 1.0 10.652783992602524 -6.260523589434111 23.892663028967032 0.9691634337497748 1.121618313318757 0.41485649501537525 0.08897866587107542 31.978062935262706 834257.5770581478 0.010973004626860619 0.027286085344617003 5.488787415267528e-07 6.260523589434111 0.15245487956898218 SSGGGYSGDR ddPTM_A549_PD325901_60min_R1 2 SSGGGYSGDR 10 0 Q92804-2;Q92804;A0A075B7F4 Q92804-2 TAF15 TATA-binding protein-associated factor 2N 0 ; 96.331 0.0014918 7212900.0 2941.1 2800.5 2593.2 2342.49 3337.2 2570.1000000000004 2902.6000000000004 2956.3 3321.2 3324.0 3746.7 False True 3239.6783068766135 3036.5079633556047 2769.1901461783873 2487.180287119215 3102.806584715 2549.16995771394 3013.060031363666 2897.3342773275153 3181.621513784109 3114.122072722612 3285.8796522881626 0.9859394286155988 0.9241080881465319 0.8427545860512657 0.7569298179826022 0.9442849139512224 0.775795289988419 0.9169721201643781 0.8817530110422398 0.9682708590889956 0.9477285848110885 1.0 11.682063926171443 -8.794399335797209 1.7212725924383439 0.9889042475439324 0.8719064147017087 0.2708142235855513 0.06638497790376292 0.2550547582788209 1.48323686121789 0.012303182446502383 0.013074669648280777 1.6054643421696814e-09 8.794399335797209 -0.11699783284222365 SSGGREDLES(ph)SGLQR ddPTM_A549_MK2206_60min_R1 3 SSGGREDLESSGLQR 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 SSGGREDLES(0.591)S(0.409)GLQR;SSGGREDLES(0.596)S(0.404)GLQR;SSGGREDLES(0.5)S(0.5)GLQR 85.42 5.521799999999999e-06 100566000.0 2763.7 2989.2 2590.0 2341.1000000000004 3524.0 2549.9 2527.3 2852.7 3640.8 3415.8 3859.1000000000004 True False 3230.144994022278 3141.3375120944984 2957.3009455381234 2914.669605095972 3005.6242682145735 2819.7287255133697 2986.4776960989184 3257.0789610273514 2816.164613162906 2644.168407623869 2900.7789642583148 1.113543994155438 1.082928947982664 1.0194851045102846 1.0047885898956141 1.0361438445493782 0.9720591469589381 1.0295433512503134 1.1228290749344072 0.9708304727323326 0.9115373629648279 1.0 11.502224652822099 -2.0000000000000266 0.4086555312381615 0.9962455372061043 3.08261999378065 0.3467615530820386 0.04908682738334109 47.9259748498787 0.5501345654341767 0.009600298489146168 82.02389532505434 0.009999999999999386 2.0000000000000266 2.0863744565745455 SSGGREDLES(ph)SGLQR ddPTM_A549_PD325901_60min_R1 1 SSGGREDLESSGLQR 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 SSGGREDLES(0.542)S(0.458)GLQR 91.441 1.8627000000000002e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSGGREDLESS(ph)GLQR ddPTM_A549_PD325901_60min_R1 3 SSGGREDLESSGLQR 15 1 Q9UK76;J3KT51;Q9UK76-3;Q9UK76-2;J3KSH8 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 SSGGREDLES(0.18)S(0.82)GLQR;SSGGREDLES(0.107)S(0.893)GLQR;SSGGREDLES(0.247)S(0.753)GLQR 144.3 4.1005000000000004e-14 167312200.0 3744.8199999999997 4066.7799999999997 4555.610000000001 3909.88 4538.08 4588.24 3943.7599999999998 4332.24 3844.42 4340.88 4565.03 True False 4124.991369609222 4409.50182296565 4864.7810897083655 4151.384407618253 4219.340916326094 4550.874894666124 4093.841944908277 4245.8300746234645 3682.8523967306737 4066.796095980786 4003.5602501094354 1.0303307835810556 1.1013951451948596 1.215113745215996 1.036923175442352 1.0538971946808495 1.136706983376041 1.022550352475993 1.060513595244984 0.9198943357053274 1.0157949030165394 1.0 11.967067802335594 -8.376656556116842 1.8154447625634957 0.9631587869238183 1.0941390380760316 0.3650151003094455 0.058501558531727664 0.21260397012720803 1.3648960873681832 0.01044673367800981 0.012933084238601974 4.2009106436373204e-09 8.376656556116842 0.13098025115221335 SSGKT(ph)PETLVPTAPK ddPTM_A549_MK2206_60min_R1 1 SSGKTPETLVPTAPK 15 1 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.129)S(0.129)GKT(0.733)PET(0.009)LVPTAPK 104.03 2.3094e-06 5076100.0 2242.9 2200.9 2575.8 2631.7 2739.1 2522.8 2674.4 2547.5 3951.5 3526.0 3800.5 True False 2621.4466863597936 2312.9164091960315 2941.0871720143223 3276.4666181415005 2336.1820184638295 2789.7610215008917 3160.3038620056786 2908.615926391549 3056.4915592488524 2729.4741510866465 2856.7309615360364 0.917638630188076 0.8096374633586072 1.0295289306602846 1.1469286615564864 0.8177816006893723 0.976557141384033 1.1062658348150551 1.0181623560475623 1.0699262900155662 0.9554536943930607 1.0 11.4801494585863 -7.5362878629057795 23.800716098151007 1.0376726921323471 0.9472489830813975 0.1565762330132514 0.09415781364183304 173.63540185822254 308195.36459902575 0.014015205410759502 0.02079582993859553 2.9087884500872494e-08 7.5362878629057795 -0.09042370905094965 SSGKT(ph)PETLVPTAPK ddPTM_A549_PD325901_60min_R1 1 SSGKTPETLVPTAPK 15 1 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.151)S(0.151)GKT(0.675)PET(0.022)LVPTAPK 91.589 1.1553e-05 6826300.0 3934.3 3223.7 3531.8 3735.6 5261.8 4027.2 3916.3 4248.5 3831.6 3996.4 4257.0 True False 4333.70723972142 3495.3725125761353 3771.489186438699 3966.3395278368484 4892.229320224552 3994.4038184139026 4065.3369395815917 4163.760334616224 3670.571176747923 3744.0666219701093 3733.4159873463886 1.1607887399661836 0.936239766589887 1.0101979525510556 1.062388852803948 1.3103895565899197 1.0699059070706496 1.0889054296012493 1.1152682553265951 0.9831669412646582 1.0028527854007747 1.0 11.866280551257983 -8.76674999226796 24.968078399846647 0.992051048701751 1.0913426968124873 0.19890660959978235 0.08820466853095688 151.24152141159126 711066.554505706 0.015477008489822294 0.016713484396097728 1.7109999928728065e-09 8.76674999226796 0.09929164811073632 SSGKTPET(ph)LVPTAPK ddPTM_A549_PD325901_60min_R1 1 SSGKTPETLVPTAPK 15 1 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.221)S(0.221)GKT(0.183)PET(0.376)LVPTAPK 98.796 4.4478e-06 7882800.0 2847.4 3766.8 3625.9 3691.9 4306.4 3967.2 3936.5 3837.2 3900.0 3370.5 4390.9 True False 3136.4659518549106 4084.241455585752 3871.975378307965 3919.94027808675 4003.933320273486 3934.89243852097 4086.3056616354543 3760.664035774835 3736.096562615327 3157.6860547868732 3850.8471362084197 0.8144872649873878 1.0606085651083867 1.0054866478341564 1.0179423226719821 1.0397538979477114 1.0218251463482662 1.0611446045762465 0.9765809710840977 0.9702012129969726 0.8199977675291367 1.0 11.910960139500128 -5.250138501028328 24.776954412851694 1.0021309668006815 0.8144871405397014 0.4077953120022684 0.06311331999082789 628.792516217776 1378586.9149184958 0.004775319498754998 0.10230257910778028 5.621620172846989e-06 5.250138501028328 -0.18764382626098008 SSGNS(ph)PTPVSR ddPTM_A549_MK2206_60min_R1 2 SSGNSPTPVSR 11 0 H0YBT1;O95429-2;O95429 H0YBT1 BAG4 BAG family molecular chaperone regulator 4 1 SSGNS(0.999)PTPVSR;S(0.001)S(0.001)GNS(0.997)PT(0.001)PVSR 197.63 6.7399e-24 186774000.0 5144.9 6156.6 5275.4 5078.700000000001 7104.9 4560.6 6016.6 5644.4 8807.0 8335.7 8859.1 True False 6013.233339271706 6469.9446430352555 6023.531045595293 6322.98172799151 6059.778621804116 5043.199664918729 7109.738339868141 6444.510985250032 6812.228561889063 6452.659580604924 6659.140971278494 0.9030043612543046 0.9715884782948341 0.904550762864963 0.9495191279570636 0.9099940439676101 0.757334870469108 1.067665990333155 0.9677691181258691 1.022989089924789 0.968992788774987 1.0 12.701120366401728 -7.807645058987574 24.999991989963377 1.0110881295079424 0.9056182983359087 0.4614278172704259 0.056736085907088875 79.52243324273593 43026.01609294668 0.008252582876043933 0.011402601562418593 1.5572378139230425e-08 7.807645058987574 -0.10546983117203368 SSGNS(ph)PTPVSR ddPTM_A549_PD325901_60min_R1 2 SSGNSPTPVSR 11 0 H0YBT1;O95429-2;O95429 H0YBT1 BAG4 BAG family molecular chaperone regulator 4 1 S(0.07)S(0.009)GNS(0.612)PT(0.308)PVS(0.001)R;SSGNS(1)PTPVSR 181.88 1.5862999999999998e-18 226130000.0 5750.299999999999 6051.6 6127.0 5755.7 6892.5 6116.5 5997.6 6815.700000000001 6489.700000000001 6303.299999999999 7185.3 True False 6334.06622285288 6561.58957009205 6542.815064644066 6111.216516856877 6408.394577834152 6066.6892519191115 6225.841950012647 6679.755516686786 6216.960477539668 5905.308562272091 6301.553651369509 1.0051594532526602 1.0412653661476052 1.0382860206581157 0.9697952052711214 1.0169546959965061 0.9627291280144296 0.9879852326036441 1.060017241182273 0.986575822644713 0.9371194611647395 1.0 12.621491854352199 -6.240917458641267 24.54170108435963 0.9960445637371652 1.029539791836346 0.21096525288351353 0.03130421795921237 687.153305778914 821749.4703331061 0.00341240023556207 0.009014546953792722 5.742255882920501e-07 6.240917458641267 0.03349522809918082 SSGNSS(ph)SSGSGSGSTSAGSSSPGAR ddPTM_A549_MK2206_60min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNS(0.082)S(0.796)S(0.082)S(0.031)GS(0.007)GS(0.001)GSTSAGSSSPGAR;SSGNS(0.012)S(0.474)S(0.474)S(0.04)GSGSGSTSAGSSSPGAR 447.25 0.0 115384000.0 4270.6 5576.0 3983.2 4230.6 5339.9 4071.3 4158.5 4011.7 6250.2 6652.3 6389.799999999999 True False 4991.372873854447 5859.794582978361 4548.077654929515 5267.097189918852 4554.407783722758 4502.122263689784 4914.045621504121 4580.37076031599 4834.539679518454 5149.5408097770005 4803.036310491507 1.0392119799201907 1.220018797313384 0.9469171917345132 1.0966182325987572 0.9482351348821458 0.9373492042638899 1.0231123197570111 0.9536406689890856 1.0065590528554058 1.0721428023620407 1.0 12.229730999914077 -5.772432286903729 24.999999318264923 0.9965772780697478 1.1296154103509395 0.3958502447114024 0.06254743506067575 109.9916803875928 250144.45132149398 0.007012617108381637 0.022103415009505686 1.6887591421234468e-06 5.772432286903729 0.13303813228119166 SSGNSSSS(ph)GSGS(ph)GSTSAGSSSPGAR ddPTM_A549_PD325901_60min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 2 SSGNS(0.005)S(0.021)S(0.141)S(0.695)GS(0.222)GS(0.466)GS(0.09)T(0.084)S(0.079)AGS(0.067)S(0.047)S(0.082)PGAR 65.454 0.00027925 7367400.0 304.65 272.74 325.44 211.86 288.73 368.38 379.3 505.01 361.53 528.25 219.42 True False 335.5778437285236 295.72475698111333 347.52631542969857 224.94611103102974 268.45060086442584 365.38003541599954 393.73446906092397 494.9371793773188 346.336151354441 494.8962048482911 192.43273101798076 1.7438709202602725 1.5367695267676738 1.8059626010152399 1.1689597182405054 1.3950360702376667 1.8987416199059126 2.046088869487248 2.5720010143756276 1.7997777692095407 2.5717880852714625 1.0 7.588210398764074 SSGNSSSS(ph)GSGSGSTSAGSSSPGAR ddPTM_A549_PD325901_60min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSS(0.002)S(0.081)S(0.417)GS(0.417)GS(0.081)GS(0.002)TSAGSSSPGAR 175.86 4.5294999999999995e-48 96456000.0 1024.6 994.5 1120.2 1373.4 1295.0 1265.0 1376.2 1324.5 1584.5 1871.7 1126.2 True False 1128.6166377293455 1078.3100051980534 1196.2235083098226 1458.2317987822923 1204.0436675074689 1254.698259409413 1428.572044085536 1298.0818084498503 1517.908975247176 1753.5205425736806 987.6845395700027 1.1426893836170593 1.0917554765689714 1.211139245766274 1.4764145234237913 1.2190569147024009 1.270343119834251 1.4463849405878901 1.314267619309888 1.5368358159256104 1.7753852291107963 1.0 9.947906517140943 -5.996820391763626 12.732370378933048 1.289310429778487 1.1257151564050714 0.11265381998124557 0.20187259997499749 0.4504161234822792 1674.4411301797666 0.027613657942678834 0.08320895187172962 1.0073481849048702e-06 5.996820391763626 -0.16359527337341562 SSGNSSSSGS(ph)GSGSTSAGSSSPGAR ddPTM_A549_PD325901_60min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSS(0.001)S(0.011)S(0.07)GS(0.9)GS(0.018)GSTSAGSSSPGAR;SSGNS(0.001)S(0.006)S(0.013)S(0.051)GS(0.814)GS(0.089)GS(0.01)T(0.01)S(0.006)AGSSSPGAR 450.36 0.0 105177200.0 5873.6 4943.6900000000005 6745.09 6481.75 7267.31 5861.54 6413.33 7394.74 7749.72 6788.85 6178.35 True False 6469.883548084215 5360.3121061815655 7202.852368921173 6882.112976377687 6756.879216458457 5813.805561627395 6657.392782658838 7247.2461096386905 7424.026218777249 6360.200852407614 5418.45211778754 1.1940464559694208 0.989269996238388 1.3293191879053161 1.2701252731910802 1.2470128128062932 1.072964277481017 1.2286521386438276 1.3375122548093832 1.3701378285517865 1.173804015270067 1.0 12.403665062269285 -11.034268138038394 1.358760545970441 1.0012715809732804 1.2401019541903109 0.10951914621947711 0.11860869432430513 0.38048699921438933 1.2627486975889841 0.08176621942743519 0.01878416273068747 9.24127431646847e-12 11.034268138038394 0.2388303732170305 SSGNSSSSGSGS(ph)GSTSAGSSSPGAR ddPTM_A549_MK2206_60min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNS(0.001)S(0.001)S(0.002)S(0.007)GS(0.135)GS(0.635)GS(0.179)T(0.039)S(0.002)AGSSSPGAR;SSGNS(0.001)S(0.001)S(0.002)S(0.006)GS(0.082)GS(0.328)GS(0.328)T(0.209)S(0.042)AGS(0.001)S(0.001)SPGAR 84.94200000000001 3.2222000000000004e-07 2817200.0 175.56 135.36 0.0 0.0 278.73 0.0 0.0 124.68 0.0 188.22 247.91 True False 205.1902359700947 142.24924583069426 0.0 0.0 237.72918623139836 0.0 0.0 142.35377181648616 0.0 145.70097127553282 186.3471050320745 1.1011184527646773 0.763356349465209 0.0 0.0 1.2757331872179063 0.0 0.0 0.7639172703648061 0.0 0.781879446157505 1.0 7.541848596239869 -11.071854409220744 1.3967065056168213 0.9991064667295676 0.37409283112234687 0.11096462283669095 0.4652677247397302 0.5642963090746017 1.969650989941715 0.32733830632153565 0.07271647743411465 8.475114821687652e-12 11.071854409220744 -0.6250136356072207 SSGNSSSSGSGSGSTS(ph)AGSS(ph)SPGAR ddPTM_A549_MK2206_60min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 2 SSGNSS(0.001)S(0.001)S(0.001)GS(0.015)GS(0.077)GS(0.082)T(0.36)S(0.38)AGS(0.332)S(0.386)S(0.364)PGAR 54.223 0.005972600000000001 2234900.0 181.84 0.0 0.0 0.0 0.0 150.41 151.45 228.75 218.67 275.75 146.48 True False 212.5301464388359 0.0 0.0 0.0 0.0 166.32628636592253 178.96650459944658 261.1760130174943 169.14159414423548 213.45788348330763 110.10497335766317 1.9302501963145344 0.0 0.0 0.0 0.0 1.5106155634371845 1.6254170828241767 2.372063722944598 1.5361848696407086 1.9386761285515648 1.0 6.782735825583358 -7.268434037956454 24.570718478821657 1.3994395519045812 0.32170836146254705 0.47249992616217473 0.638168065294869 337.82040751918345 1186689.3572381567 0.09554752357554823 0.15478291720205584 5.389716999132507e-08 7.268434037956454 -1.0777311904420341 SSGNSSSSGSGSGSTSAGS(ph)SSPGARR ddPTM_A549_PD325901_60min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGARR 26 1 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGS(0.002)T(0.011)S(0.048)AGS(0.335)S(0.335)S(0.267)PGARR;SSGNSSSSGSGS(0.001)GS(0.014)T(0.062)S(0.062)AGS(0.287)S(0.287)S(0.287)PGARR 68.543 8.8014e-05 147876000.0 421.88 171.0 265.48 506.29 473.15000000000003 989.71 505.0 841.83 683.97 596.3399999999999 638.04 True False 464.70894702835875 185.41077012455224 283.49706926092813 537.5623834319836 439.9175762788869 981.6501298973053 524.2180513466035 825.0390402471412 655.2251194697452 558.6869906279786 559.5651248688017 0.8304823270344388 0.3313479734249423 0.5066382028854964 0.9606788549554852 0.7861776167376979 1.7543089915181322 0.9368311712948768 1.4744289870470104 1.1709541755722757 0.998430684469428 1.0 9.128162238505547 -6.5510491932111 1.901890874984561 1.1415188263044247 0.5364510829670988 0.4864546239237105 0.27229170280553305 0.21610515465963903 1.551323990080016 0.03792949112669564 0.10177830950889888 2.811582340058912e-07 6.5510491932111 -0.6050677433373259 SSGNSSSSGSGSGSTSAGSS(ph)SPGAR ddPTM_A549_MK2206_60min_R1 3 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGS(0.008)GS(0.035)T(0.035)S(0.03)AGS(0.275)S(0.308)S(0.308)PGAR;SSGNSSSSGSGSGSTSAGS(0.064)S(0.468)S(0.468)PGAR;SSGNSSSSGSGS(0.001)GS(0.001)T(0.001)S(0.002)AGS(0.04)S(0.478)S(0.478)PGAR 119.79 5.5585e-17 108316500.0 363.26 278.01 501.92 0.0 194.96 0.0 0.0 359.65 416.73 197.47 405.71 True False 424.56940714568566 292.159521523281 573.0998033144768 0.0 166.28164226195034 0.0 0.0 410.63148888193183 322.3413203810639 152.86138985112876 304.9610099736315 1.392208817718685 0.9580225404832657 1.8792559854259072 0.0 0.5452554156884774 0.0 0.0 1.3465048824354207 1.0569919099131235 0.5012489624963727 1.0 8.252480992078347 -8.358309480996484 21.6182812921083 1.0516312931990872 0.680273521966302 0.049100688171648366 0.5893546336083612 31.01654790515593 6913.489457507104 0.09557890287506993 0.11554921582419538 4.38218309342467e-09 8.358309480996484 -0.37135777123278524 SSGNSSSSGSGSGSTSAGSSS(ph)PGAR ddPTM_A549_MK2206_60min_R1 3 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTSAGS(0.013)S(0.104)S(0.883)PGAR;SSGNSSSSGSGSGSTSAGSS(0.003)S(0.996)PGAR;SSGNSSSSGSGSGSTSAGSSS(1)PGAR 462.34 0.0 1932061000.0 71487.5 70828.0 65472.61 63690.38 90172.5 70572.8 63266.66 64018.15 104434.25 105888.56 94219.0 True False 83552.84229842873 74432.84266915197 74757.61060225822 79294.52595916977 76908.2447007884 78040.76685356685 74761.39318508818 73092.9188098619 80780.0591222281 81968.26075320128 70821.82198788678 1.1797612650055718 1.0509874016215341 1.0555731059142281 1.1196340864081715 1.0859399340777003 1.101931080887961 1.055626515763393 1.032067754799694 1.1406097281152205 1.1573870659133982 1.0 16.111906339051743 -11.022769720383916 1.288654016450989 0.9996052678147094 1.0931948214686105 0.0 0.062031687697311426 0.36972892613792474 1.0860154515439449 0.030399397258210052 0.006734989155460303 9.489214845488526e-12 11.022769720383916 0.09358955365390109 SSGNSSSSGSGSGSTSAGSSS(ph)PGAR ddPTM_A549_PD325901_60min_R1 7 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGS(0.005)GS(0.02)T(0.02)S(0.097)AGS(0.133)S(0.133)S(0.591)PGAR;SSGNSSSSGSGSGSTSAGS(0.002)S(0.006)S(0.993)PGAR;SSGNSSSSGSGSGSTSAGS(0.001)S(0.032)S(0.967)PGAR;SSGNSSSSGSGSGSTSAGS(0.007)S(0.08)S(0.912)PGAR;SSGNSSSSGSGSGSTSAGS(0.002)S(0.119)S(0.878)PGAR;SSGNSSSSGSGSGSTSAGS(0.01)S(0.265)S(0.725)PGAR;SSGNSSSS(0.001)GS(0.005)GS(0.005)GS(0.004)T(0.004)S(0.004)AGS(0.023)S(0.134)S(0.818)PGAR 441.86 0.0 3084598900.0 19770.05 18175.653000000002 18391.29 19835.27 22707.37 19853.77 20161.62 19167.379999999997 20912.449999999997 21076.04 20194.52 True False 21777.09092205841 19707.37906576976 19639.433535210985 21060.44957873338 21112.48266737379 19692.087479616468 20928.881481961784 18785.071569381274 20033.572451503824 19745.2952375405 17710.722063609664 1.2295992700830611 1.1127371879581713 1.1089007813839649 1.189135570141797 1.1920735129570887 1.1118737795607965 1.1817068444072358 1.0606609658213249 1.1311550358902043 1.114878047694695 1.0 14.112335411309138 -12.363630209938476 0.22417857926842635 0.7887049943392883 1.172841006561529 0.2264052530662457 0.0549611463973582 6.496985335894033 0.22447494159765957 0.7199443901423739 0.03222645185622036 4.3288226175240767e-13 12.363630209938476 0.3841360122222406 SSGNSSSSGSGSGSTSAGSSS(ph)PGARR ddPTM_A549_MK2206_60min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGARR 26 1 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTSAGSS(0.139)S(0.86)PGARR;SSGNSSSSGSGSGSTSAGSS(0.016)S(0.983)PGARR 306.25 2.187299999999999e-189 205710000.0 4885.9 5727.1 6613.9 5391.9 9216.0 4885.1 4412.0 2490.3 12011.7 13412.3 14740.400000000001 True False 5710.520471213749 6018.584927578079 7551.850472468949 6712.915742051587 7860.338608361377 5402.038039533063 5213.603290146968 2843.307651223898 9291.069128743378 10382.452114753094 11079.951865656056 0.5153921732200254 0.5431959453031173 0.6815779133370626 0.6058614535013693 0.7094199238108294 0.4875506775690494 0.4705438573526028 0.2566173288204572 0.8385477880587565 0.9370484854663526 1.0 13.435663993487982 -8.94002073136207 7.725516034432807 0.9294285430431831 0.5429937343833675 0.6988836942018363 0.11567486746288276 0.10324770661672072 11.350970000613911 0.022262457570841398 0.023543328878869216 1.1480988148591783e-09 8.94002073136207 -0.3864348086598156 SSGNSSSSGSGSGSTSAGSSS(ph)PGARR ddPTM_A549_PD325901_60min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGARR 26 1 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTSAGS(0.001)S(0.057)S(0.942)PGARR 298.79 4.934199999999999e-171 206130000.0 3143.7 2518.9 2741.2 3296.4 2468.3 6370.9 3579.5 4198.9 4835.3 3986.0 5027.7 True False 3462.8461097303766 2731.1765430803202 2927.234316174687 3500.011141332421 2294.9351231727283 6319.017502665161 3715.7198312775586 4115.149645526673 4632.089156208692 3734.3232797449828 4409.324773216217 0.7853461216476765 0.6194092482528035 0.6638736012270481 0.7937748570013973 0.5204731429884611 1.433103213682305 0.8426958825641835 0.9332834066847453 1.0505212009661034 0.8469149976042977 1.0 12.106342028672294 -7.230647393307378 24.99998910186642 1.0273460695426955 0.6792049220367576 0.5180256036566901 0.1637129914678526 365.8502123531749 297033.6825895258 0.020537214090482304 0.03556886770498727 5.8796653288386984e-08 7.230647393307378 -0.34814114750593783 SSGNSSSSGSGSGSTSAGSSSPGAR ddPTM_A549_PD325901_60min_R1 1 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-7;E5RHJ2 Q12797 ASPH Aspartyl/asparaginyl beta-hydroxylase 0 115.31 2.48e-16 8410500.0 0.0 217.62 288.17 196.27 358.99 0.0 0.0 189.99 306.31 271.08 259.45 False True 0.0 235.95960113745645 307.7269491069821 208.39315213848877 333.77578084826735 0.0 0.0 186.20050040572826 293.4368559217185 253.96396253719763 227.5392947890579 0.0 1.0370059437698647 1.352412335602353 0.915855664981652 1.4668929213202353 0.0 0.0 0.8183223938456297 1.2896095867474295 1.1161323268257333 1.0 7.82997190212766 -8.624456792549754 6.333223080580973 1.1355056783515383 0.7123162692951464 0.13606800627583504 0.49469966656399206 0.3428061068299346 18.65035374791668 0.08731941182308862 0.09901091916927537 2.3743416314576344e-09 8.624456792549754 -0.4231894090563919 SSGPTS(ph)LFAVTVAPPGAR ddPTM_A549_MK2206_60min_R1 2 SSGPTSLFAVTVAPPGAR 18 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;A0A1W2PP22 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.002)S(0.002)GPT(0.16)S(0.833)LFAVT(0.003)VAPPGAR;S(0.001)S(0.001)GPT(0.016)S(0.983)LFAVTVAPPGAR 85.619 5.7477e-05 42223000.0 1611.23 2120.85 1923.48 1636.06 2862.9 1972.75 1746.55 2387.9 3440.9 2440.9 3136.7 True False 1883.1662332085662 2228.7922061172267 2196.258387151996 2036.8947734455242 2441.771202460699 2181.505095594532 2063.8755272906146 2726.3921376370495 2661.541643988202 1889.4989947213255 2357.770821484038 0.7987062254096671 0.9452963730861556 0.9314978229180128 0.8639070239080544 1.0356270338962754 0.9252405177452488 0.8753503557192897 1.1563431495521657 1.1288381464967672 0.8013921359549394 1.0 11.203207777883492 -8.250798690034015 24.99945423612321 1.0697029026682945 0.9164786446486615 0.1521661058863143 0.10510059382168721 457.9899702045219 1076011.3674926776 0.012036022359795054 0.015453307226507737 5.613081007508461e-09 8.250798690034015 -0.15322425801963302 SSGPTS(ph)LFAVTVAPPGAR ddPTM_A549_PD325901_60min_R1 1 SSGPTSLFAVTVAPPGAR 18 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;A0A1W2PP22 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 SSGPT(0.016)S(0.984)LFAVTVAPPGAR 166.92 6.7391e-24 29438000.0 1447.3 1496.9 1683.3 1881.3 1972.6 1482.6 1877.9 1786.5 1862.1 1504.0 1791.8 True False 1594.228830554052 1623.049016371006 1797.5388605051992 1997.5036282577007 1834.051381100565 1470.526197154464 1949.3645121263098 1750.8668560178612 1783.84241262718 1409.0371833257545 1571.4199591560382 1.0145148158931772 1.0328550346545784 1.1438946349329828 1.2711456390884197 1.1671300026541462 0.9357945268457954 1.240511488204117 1.114194105666189 1.1351786657878695 0.8966649399581926 1.0 10.617853074476466 -10.709410111958938 0.8846933827775936 0.9972478512399736 1.1202536400515701 0.2750665028699122 0.09776691482583251 0.863816454024164 1.1593385968112861 0.07036332090220422 0.016792732957544992 1.9524948095715997e-11 10.709410111958938 0.12300578881159652 SSGPYGGGGQYFAK ddPTM_A549_MK2206_60min_R1 1 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;Q32P51 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 134.75 1.5412e-08 1398800.0 1720.3 1909.2 2148.2 2070.7 2399.2 2086.7 1607.2 1629.0 3173.7 3081.0 2379.9 False True 2010.6445827030866 2006.3701251474693 2452.8470622413097 2578.0215929572546 2046.2808582010227 2307.5132089606445 1899.2074360662302 1859.9157386032716 2454.862017357481 2384.9999601525683 1788.9051481014646 1.123952594600642 1.1215631679951263 1.3711442805363245 1.4411169847061294 1.1438733128878893 1.2899024922643718 1.061659103660039 1.0396950003621876 1.3722706427240066 1.3332176737731058 1.0 10.804861179043847 -7.733833227478895 24.95559832543101 1.1601051593787557 1.2523798308557452 0.08535933272138596 0.14184528950819802 507.2992353073186 458590.7193370493 0.025707850612141 0.03812632498310747 1.845724055767161e-08 7.733833227478895 0.09227467147698953 SSGPYGGGGQYFAK ddPTM_A549_PD325901_60min_R1 2 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-2;P09651;P09651-3;H0YH80;Q32P51 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ; 178.81 8.387e-23 4770800.0 5451.4 5725.9 5603.4 5626.2 6550.1 5173.1 5932.5 5508.2 6374.6 6425.5 5811.9 False True 6004.822114891428 6208.441688047801 5983.680419981481 5973.717595972716 6090.043572618281 5130.971988735839 6158.264533888567 5398.334629900691 6106.697730268633 6019.7928334173075 5097.073144669597 1.1780922000640963 1.2180405326418453 1.1739443892891899 1.1719897726443054 1.1948118851280582 1.0066506489320626 1.2081962253825491 1.0591047992996032 1.1980792813724632 1.1810293206627158 1.0 12.315453341200438 -14.516213698996115 0.2990960858495091 3.7350330740238245e-12 1.1705399790627091 0.0 0.0832515568176688 21.592490615658168 0.3731517264755425 12.892987695980965 0.02250585798600515 3.046395610967455e-15 14.516213698996115 1.1705399790589741 SSGPYGGGGQYFAKPR ddPTM_A549_MK2206_60min_R1 2 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-2;P09651;P09651-3;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 140.27 1.3059e-11 13710300.0 4378.6 4812.200000000001 5459.4 5031.1 7189.4 5052.1 5016.200000000001 4532.7 8208.3 7807.299999999999 7045.3 False True 5117.600633507957 5057.120425431935 6233.625012382561 6263.719725854661 6131.84878374059 5586.709868687437 5927.57860925549 5175.224105811572 6349.133155961623 6043.625507594663 5295.757569611856 0.9663585551713697 0.954938053518675 1.1770978807928032 1.182780677460987 1.1578794352155388 1.0549406379070532 1.1193070172375625 0.9772396182763484 1.1989093293080961 1.141220199027657 1.0 12.37062136429888 -5.742400357479869 24.93307280718849 1.1013375174229518 0.9606481583328167 0.39943397974790373 0.07064049698468106 226.67058477623755 296837.61175667786 0.011601119537067292 0.044786650845581144 1.8096710651975848e-06 5.742400357479869 -0.14068935909013514 SSGPYGGGGQYFAKPR ddPTM_A549_PD325901_60min_R1 2 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-2;P09651;P09651-3;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 252.91 1.9807999999999996e-77 23752000.0 5235.4 4956.3 5918.1 5449.0 6964.4 6689.7 5615.5 6831.200000000001 7256.2 6388.200000000001 6638.1 False True 5766.893953902223 5373.98479513636 6319.737854426311 5785.572354423119 6475.24456987569 6635.22130116297 5829.2009254195045 6694.946357027272 6951.247148115218 5984.847961782971 5821.655782382909 0.9905934272777854 0.9231024636322093 1.0855567712455043 0.9938018616509442 1.1122685386983246 1.1397481316641938 1.0012960476054644 1.1500072500485266 1.1940326614896402 1.0280319183236326 1.0 12.50721382427217 -6.085155320426201 1.0928183974802572 1.0952351201801334 0.9527011429370519 0.2811122180546609 0.06843528158048925 0.7055906757333009 1.340919516742941 0.012509478638510183 0.08217292676009928 8.219486368990714e-07 6.085155320426201 -0.14253397724308148 SSGRNS(ph)PSAASTSSNDSK ddPTM_A549_MK2206_60min_R1 2 SSGRNSPSAASTSSNDSK 18 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.169)S(0.169)GRNS(0.651)PS(0.01)AASTSSNDSK;S(0.145)S(0.145)GRNS(0.705)PS(0.004)AASTSSNDSK 83.905 3.6296e-05 164417000.0 1931.22 1571.96 1485.3400000000001 1424.72 2049.5 1730.35 1799.63 1496.18 2823.6 2506.9 2110.71 True False 2257.1627222041843 1651.9660496159734 1695.9835468901913 1773.7764639581105 1748.0212649562336 1913.4544884866298 2126.599476211965 1708.268096859081 2184.0591083626614 1940.5895488823344 1586.5624543675133 1.4226749889300812 1.0412234608656066 1.068967403219118 1.1179997730787286 1.1017664385944934 1.2060379238265995 1.3403818238341827 1.076710275196879 1.3765982564067052 1.223140975976237 1.0 10.631688598122393 -7.276201879194246 23.382288947200514 1.1888593914026675 1.1381159316192704 0.026765507162184288 0.1364451367167801 1441.3549624704983 2282955.8329440732 0.024705302580853104 0.03962228991910353 5.2941729022139127e-08 7.276201879194246 -0.050743459783397116 SSGRNS(ph)PSAASTSSNDSK ddPTM_A549_PD325901_60min_R1 4 SSGRNSPSAASTSSNDSK 18 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.052)S(0.052)GRNS(0.834)PS(0.061)AASTSSNDSK;S(0.007)S(0.007)GRNS(0.842)PS(0.123)AAS(0.006)T(0.006)S(0.007)S(0.002)NDSK;S(0.044)S(0.044)GRNS(0.661)PS(0.252)AASTSSNDSK;S(0.054)S(0.054)GRNS(0.886)PS(0.004)AAS(0.002)TSSNDSK 119.69 9.6583e-11 197381100.0 5753.540000000001 5780.74 5650.929999999999 5673.02 6355.9400000000005 6173.530000000001 5724.379999999999 6977.0199999999995 6841.31 6254.92 6220.65 True False 6337.635145267716 6267.903247308793 6034.436091602591 6023.429561036779 5909.520701202639 6123.254818507348 5942.224413400932 6837.857862733691 6553.793531996375 5859.983283728674 5455.549485949328 1.161685942285041 1.1489041137747293 1.106109679170572 1.104092186598255 1.0832127389592021 1.1223901156570357 1.089207316092545 1.2533765627723612 1.2013076865814443 1.0741325505012753 1.0 12.413508797568468 -10.931578333045723 1.2264767986383966 1.0010697141230605 1.144173590635841 0.3426645595034229 0.05252988252392098 0.3113976822578164 0.8423581951535063 0.03666724571261743 0.008901254325427736 1.170635437515218e-11 10.931578333045723 0.14310387651278056 SSGRNS(ph)PSAASTSSNDSKAETVK ddPTM_A549_PD325901_60min_R1 1 SSGRNSPSAASTSSNDSKAETVK 23 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.121)S(0.121)GRNS(0.387)PS(0.352)AAS(0.011)T(0.004)S(0.001)S(0.001)NDSKAETVK 48.597 0.0023242 6815900.0 1269.6 1307.1 1068.6 1491.3 1417.2 1848.1 1786.4 1460.0 1539.1 1650.6 2204.3 True False 1398.4888573698777 1417.2539042678493 1141.1216220138149 1583.4142140119648 1317.660761074583 1833.049686335602 1854.3824295555887 1430.8791546521568 1474.4169793644235 1546.3808343068415 1933.185074208983 0.7234117809139969 0.7331185840278426 0.5902805878432187 0.8190701630881685 0.6816009386032225 0.9482018616793044 0.9592368854360007 0.74016666781769 0.7626879593862593 0.7999134976456337 1.0 10.916764045781926 -14.999999999999998 0.13441365848938325 1.765477569545344 0.6749434943990311 0.16042323283536664 0.11079524911648103 50.78427786034885 0.4632963281995238 10.547423311037589 0.27422708891438696 1.000000000000004e-15 14.999999999999998 -1.0905340751463128 SSGS(ph)ETEQVVDFSDR ddPTM_A549_MK2206_60min_R1 2 SSGSETEQVVDFSDR 15 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 S(0.001)S(0.009)GS(0.951)ET(0.039)EQVVDFSDR;S(0.057)S(0.359)GS(0.584)ETEQVVDFSDR 199.58 1.4750999999999998e-38 44302000.0 1665.79 1409.54 1142.1100000000001 1236.99 1933.49 1667.57 1669.6 1810.85 2416.33 2211.56 2130.45 True False 1946.9346273446347 1481.279565367883 1304.0783717793613 1540.052605530591 1649.076182278716 1844.0311505566217 1972.944708347547 2067.543532995539 1869.0351130861145 1711.9670600048742 1601.4004675712285 1.215769988063924 0.924990091712957 0.8143362002118045 0.9616911176917033 1.0297712631368188 1.1515115599743642 1.2320120721207375 1.2910846317731433 1.1671253699087496 1.069043686868243 1.0 10.645118417208803 -7.019033874454675 3.710305199118365 1.1154796364141568 0.9649069442261949 0.3009133293954299 0.11727326156896165 0.27945003333702395 8.31894038289448 0.01965917740902968 0.03674455316776105 9.571194142037831e-08 7.019033874454675 -0.15057269218796188 SSGS(ph)ETEQVVDFSDR ddPTM_A549_PD325901_60min_R1 1 SSGSETEQVVDFSDR 15 0 O95251-4;O95251;O95251-2 O95251-4 KAT7 Histone acetyltransferase KAT7 1 S(0.007)S(0.05)GS(0.942)ETEQVVDFSDR 177.74 1.0138999999999999e-27 30393000.0 711.78 559.71 578.78 624.62 681.78 620.74 611.08 625.12 676.74 549.99 534.86 True False 784.0393816152585 606.8787260024162 618.0594912868766 663.2013587850553 633.8941248133145 615.6848992456912 634.3349837958067 612.6514912028466 648.2989712267432 515.2635375381193 469.07561075689165 1.6714562932618628 1.2937759117835355 1.3176116538857932 1.4138474556690892 1.3513687565006307 1.3125493739745573 1.352308602811934 1.3060825955420783 1.3820777639252233 1.0984658458509486 1.0 8.873676680685769 -13.45627241195909 0.25371209400940664 4.2004163668505466e-13 1.4141097394827218 0.6176676994653836 0.10050003610579877 8.365526389296702 0.21408998568676427 4.313020218935215 0.0486576079228531 3.4972573214942634e-14 13.45627241195909 1.4141097394823017 SSGS(ph)PEPSPAIAK ddPTM_A549_PD325901_60min_R1 1 SSGSPEPSPAIAK 13 0 Q66K64;K7ELE9 Q66K64 DCAF15 DDB1- and CUL4-associated factor 15 1 S(0.004)S(0.008)GS(0.798)PEPS(0.191)PAIAK 94.023 0.00017384 28023000.0 6905.7 4964.1 3903.0 3207.7 4189.5 3392.1 3506.7 3183.7 3651.1 4691.4 10089.0 True False 7606.761580292349 5382.442128510466 4167.881050645632 3405.8323437847357 3895.2439729903795 3364.4758622471713 3640.1493874398707 3120.1986059356664 3497.6569640422626 4395.184203360666 8848.116959440384 0.8597040042713736 0.6083149842145497 0.47104723748014715 0.3849217137835104 0.44023423185363747 0.3802476705122537 0.41140385057365914 0.3526398464485272 0.3952995852197097 0.4967366755557273 1.0 13.111154740724015 -10.707807378612037 0.9277260991905409 1.0053813341849887 0.4678394582905108 0.029737694009657423 0.20043011693399457 0.2906732313997258 0.437853021954729 0.10533537847333146 0.026413666036797328 1.959713666971756e-11 10.707807378612037 -0.5375418758944779 SSGS(ph)PYGGGYGSGGGSGGYGSR ddPTM_A549_MK2206_60min_R1 7 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.002)S(0.004)GS(0.994)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;SS(0.004)GS(0.996)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.077)S(0.077)GS(0.697)PY(0.146)GGGY(0.001)GSGGGSGGYGSR;S(0.012)S(0.047)GS(0.924)PY(0.01)GGGY(0.002)GS(0.001)GGGS(0.001)GGY(0.001)GS(0.001)R 401.73 0.0 1185484500.0 25367.179999999997 25158.479999999996 23466.370000000003 21446.63 35545.72000000001 27818.76 25952.33 27070.3 38873.26 39379.08 42222.549999999996 True False 29648.539815993783 26438.939171443588 26794.254127161163 26701.0553127758 30316.99167513058 30762.52271860162 30667.53242859927 30907.59792431684 30068.528677840313 30483.318478041176 31737.525551901956 0.9341793129873358 0.833049795523809 0.8442452163872444 0.841308666900015 0.9552411899771989 0.9692791792571899 0.966286183163433 0.9738502730394689 0.9474125079054367 0.9604818884884484 1.0 14.95390203093739 -6.833387960994908 5.163730229397417 0.9728564048302601 0.8597565308456012 0.7636861037006002 0.02788193072391176 0.07267169569299357 3.5571512096261935 0.004303539892087982 0.008335923835835597 1.4676146523383498e-07 6.833387960994908 -0.11309987398465893 SSGS(ph)PYGGGYGSGGGSGGYGSR ddPTM_A549_PD325901_60min_R1 10 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 SSGS(0.999)PYGGGYGSGGGSGGYGSR;SSGS(0.85)PYGGGYGS(0.093)GGGS(0.056)GGYGSR;S(0.001)SGS(0.999)PYGGGYGSGGGSGGYGSR;SSGS(0.979)PYGGGYGS(0.016)GGGS(0.005)GGYGSR;S(0.001)S(0.004)GS(0.995)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.006)GS(0.993)PYGGGYGSGGGSGGYGSR;S(0.126)S(0.019)GS(0.855)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.999)PYGGGYGSGGGSGGYGSR;S(0.008)S(0.008)GS(0.491)PY(0.491)GGGY(0.002)GSGGGSGGYGSR;S(0.004)S(0.021)GS(0.973)PY(0.002)GGGYGSGGGSGGYGSR 476.73 0.0 1793025100.0 66328.05 65034.56999999999 61140.950000000004 64896.770000000004 69618.23999999999 66187.44 62027.09999999999 63349.93 76583.43000000001 77117.94999999998 78094.70000000001 True False 73061.62480787026 70515.26145274323 65290.34253739995 68905.29609164177 64728.49499228967 65648.43143301584 64387.57523303145 62086.365949091305 73364.89476315174 72248.70947596824 68489.54698309142 1.0667558485371145 1.0295769874219187 0.9532891574464453 1.006070256365588 0.9450857516734594 0.9585175304082972 0.9401080612918543 0.9065086379446936 1.0711838228578725 1.0548866602053137 1.0 16.063596197310094 -8.781840136975854 24.9998393714431 1.0336145777893382 0.975012792664287 0.29032696161085103 0.045630243815063386 266.1219531893095 326114.17379191436 0.008708497880290095 0.009276384415558395 1.652569994351459e-09 8.781840136975854 -0.05860178512505121 SSGSEGSS(ph)PNWLQALK ddPTM_A549_PD325901_60min_R1 1 SSGSEGSSPNWLQALK 16 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SSGS(0.002)EGS(0.131)S(0.866)PNWLQALK 116.19 1.6385999999999999e-07 3202800.0 2243.9 2077.3 1555.5 1626.5 2246.1 2220.2 1610.3 1929.9 2651.9 2714.1 2621.5 True False 2471.6990761281277 2252.3613612849836 1661.0655839813678 1726.9652109504857 2088.341684624343 2202.1194273049628 1671.5808476899717 1891.4066305227395 2540.4498652306634 2542.731262808796 2299.0721190576833 1.0750854902025426 0.9796827783758932 0.7224939010013248 0.751157476372822 0.908341094354312 0.9578296431203479 0.7270675999390135 0.8226826008824669 1.104989201587949 1.1059815139035225 1.0 11.16683600699263 -8.758562744642303 24.99834601801076 1.0495782378171274 0.8626531326124764 0.40163078475991276 0.10901881345967106 59.77315048431392 519436.49765643594 0.01941265169536651 0.021540252388430953 1.7435614384421314e-09 8.758562744642303 -0.186925105204651 SSGSETEQVVDFS(ph)DRETK ddPTM_A549_MK2206_60min_R1 2 SSGSETEQVVDFSDRETK 18 1 O95251-4;O95251 O95251-4 KAT7 Histone acetyltransferase KAT7 1 SSGSETEQVVDFS(1)DRETK;SSGSETEQVVDFS(1)DRETK 153.6 1.1279000000000002e-18 30031000.0 4351.8 6270.6 5323.299999999999 5313.4 6377.200000000001 4948.799999999999 5142.9 5200.9 8308.0 6562.2 7477.299999999999 True False 5086.277448705049 6589.7467561018875 6078.223985862195 6615.183238527592 5439.122327825759 5472.478731252423 6077.298359224123 5938.14350208825 6426.2512651498055 5079.794462354166 5620.480047018393 0.9049542754632263 1.1724526554627093 1.0814421428444765 1.1769783333786372 0.9677326994001444 0.9736674955648169 1.0812774546629815 1.0565189187422477 1.1433634158275976 0.9038008176986493 1.0 12.45647764142075 -11.207185022962012 1.6602995087405485 1.0000762770066396 1.0766614584181735 0.12751819993191216 0.0884567612414953 0.7297083578371185 3.6275460935662744 0.05980615042406248 0.01250772311009187 6.206045810402879e-12 11.207185022962012 0.07658518141153392 SSGSETEQVVDFS(ph)DRETK ddPTM_A549_PD325901_60min_R1 2 SSGSETEQVVDFSDRETK 18 1 O95251-4;O95251 O95251-4 KAT7 Histone acetyltransferase KAT7 1 SSGSET(0.001)EQVVDFS(0.999)DRETK;SSGSETEQVVDFS(1)DRETK 143.17 3.0480000000000004e-17 43956000.0 14052.8 15450.4 13349.0 14990.2 15573.6 13363.4 13967.5 15509.1 15532.1 17852.199999999997 17799.4 True False 15479.429910875411 16752.459431183524 14254.943414058043 15916.11060878573 14479.76406200333 13254.572901021143 14499.040855809275 15199.758833846425 14879.339851332714 16725.009045324496 15610.186639693047 0.9916236280939043 1.0731748324255102 0.9131821254341099 1.0195977137335943 0.9275843009579836 0.8490976569952001 0.9288191865010512 0.9737076938719618 0.953181418952291 1.0714163405834443 1.0 13.930200166227852 -5.75771071925554 24.999954405293874 0.9615339690121639 1.0323992218609317 0.1864657328986996 0.058520477758864875 104.55319724846383 700977.7572572448 0.00701953280673595 0.025256770016391924 1.7469854211406e-06 5.75771071925554 0.07086525284876777 SSGSPY(ph)GGGYGSGGGSGGYGSR ddPTM_A549_MK2206_60min_R1 1 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 S(0.002)S(0.002)GS(0.057)PY(0.936)GGGY(0.003)GSGGGSGGYGSR 63.037 0.0013192 6128100.0 498.3 247.63 382.04 350.76 659.76 484.57 579.62 423.27 861.18 608.14 579.11 True False 582.4008577346672 260.2333092867527 436.21901669242646 436.6962157462147 562.7101779787872 535.8468757684668 684.929451277195 483.2698187100101 666.124105021872 470.76075162842704 435.3010043770909 1.3379267492572728 0.5978238200004674 1.002108913846062 1.003205164598966 1.292692119523172 1.2309801042964639 1.5734616837315103 1.110196884111402 1.530260896078302 1.0814602927509402 1.0 8.765869538658123 -6.694697491338784 4.137615449384761 1.2711528145933337 0.9500742381011638 0.2466348966677896 0.22846897521180082 0.23532298125602996 7.944163711138985 0.0357753155008786 0.07582374108352032 2.019772750429179e-07 6.694697491338784 -0.32107857649217 SSGSPYGGGYGS(ph)GGGSGGYGSR ddPTM_A549_MK2206_60min_R1 2 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 SSGSPYGGGYGS(1)GGGSGGYGSR;SSGSPYGGGYGS(0.985)GGGS(0.008)GGYGS(0.007)R 147.25 5.2415e-27 16817800.0 3163.8 3465.3999999999996 2908.1000000000004 2766.8999999999996 4630.9 3279.8 2428.2 2763.1 4346.0 5194.799999999999 5198.0 True False 3697.7720925164385 3641.7740580798454 3320.5123087719758 3444.790624210859 3949.7007445161375 3626.8662590449626 2869.372508870096 3154.777886638857 3361.6379391359005 4021.2910720547115 3907.1931424981763 0.9464011523505494 0.9320691159258568 0.8498459604300265 0.8816535294204404 1.0108793193649963 0.9282536405983814 0.7343820497789573 0.8074281899004765 0.8603715804503436 1.029202019300122 1.0 11.931916858032945 -10.722881583550278 1.0711822531933106 0.9974547895402008 0.8820644916281745 0.32580045879841113 0.0712380077661592 0.5612288239310861 1.1815737593195088 0.046116107229052024 0.013045746827530975 1.8928596628845145e-11 10.722881583550278 -0.11539029791202637 SSGSPYGGGYGSGGGSGGYGSR ddPTM_A549_PD325901_60min_R1 2 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 131.24 2.5039e-21 3714400.0 917.85 707.33 718.73 808.1 684.81 866.58 816.17 783.67 918.01 1048.8 648.65 False True 1011.0294563145422 766.9391814748512 767.5073398745924 858.014501671742 636.7113080662468 859.5228597936832 847.2297959753604 768.0390870727776 879.4292321657688 982.5785890106719 568.8701621311332 1.777258720209489 1.3481796594880295 1.3491784083020166 1.5082782659181846 1.1192559400214688 1.5109297639617636 1.489320151370606 1.3501131509438054 1.545922586045297 1.7272457836946151 1.0 9.151955601842106 -10.842734377199763 0.9727179398060984 0.9871776593339008 1.4389119812040767 0.0 0.2643174348235457 0.3625386097940654 0.5799335584323435 0.11871598052789929 0.025930716842016935 1.4363676746564088e-11 10.842734377199763 0.4517343218701759 SSGSS(ph)PAMETR ddPTM_A549_PD325901_60min_R1 1 SSGSSPAMETR 11 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.035)S(0.035)GS(0.195)S(0.733)PAMET(0.001)R 50.354 0.0094596 6590600.0 295.82 321.74 227.39 267.58 273.3 371.67 294.13 293.59 335.75 427.55 310.35 True False 325.85142862882583 348.8541589466284 242.82205280715084 284.1078088817282 254.10435083381543 368.643242746796 305.3232781041119 287.7341171331004 321.63959510207627 400.5544200338604 272.17891747074253 1.1971956963340218 1.2817089662505838 0.8921412983180544 1.0438273894313213 0.9335930688354288 1.3544151258020296 1.1217741658368239 1.0571506412285954 1.1817211931436624 1.4716585096158943 1.0 8.088411512170078 -11.012924631088648 1.2884725035200846 0.9998094671746428 1.1213143606047844 0.0 0.19170861292276453 0.8786373477043693 2.5906544579707034 0.09327700838527397 0.020995401430221442 9.706784073941159e-12 11.012924631088648 0.12150489343014159 SSGSSSSGLGTVSNS(ph)PASQR ddPTM_A549_MK2206_60min_R1 2 SSGSSSSGLGTVSNSPASQR 20 0 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 SSGSSSSGLGTVSNS(1)PASQR;SSGSSSSGLGTVSNS(0.999)PAS(0.001)QR 284.27 6.3742999999999984e-127 18173100.0 2408.6 2602.8 2156.65 2664.3 3276.2 3185.7 3097.7 2571.2 3998.3 4120.0 4170.6 True False 2815.112795383744 2735.2714025423384 2462.495399303009 3317.0536196049734 2794.2753199558983 3522.8086595034847 3660.5119927217274 2935.675473969754 3092.6914339730974 3189.289138535729 3134.924917295671 0.8979841207208843 0.872515761845393 0.7855037885332417 1.058096671248642 0.8913372389047095 1.123729834825652 1.1676553950387596 0.9364420365455518 0.9865280718241233 1.0173414747320184 1.0 11.614215174980517 -6.265481556874736 24.995928778730978 1.0072938099217885 0.854052676379243 0.47590147975475294 0.07855235995608202 239.20681904475435 1479207.8434101318 0.010888583742933144 0.02619474668490163 5.426482954117732e-07 6.265481556874736 -0.15324113354254554 SSGSSSSGLGTVSNS(ph)PASQR ddPTM_A549_PD325901_60min_R1 2 SSGSSSSGLGTVSNSPASQR 20 0 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 SSGSSSSGLGTVS(0.031)NS(0.966)PAS(0.003)QR;SSGSSSSGLGTVSNS(1)PASQR 316.66 2.2003999999999992e-183 27472000.0 3859.9 3169.3999999999996 3838.9 4041.8 5101.799999999999 3930.8 3944.5 4378.9 4710.4 3801.5 4370.9 True False 4251.754206491805 3436.4964610102675 4099.430839181017 4291.452806406196 4743.467168254521 3898.788868052588 4094.6101060132214 4291.559404319403 4512.438268857242 3561.472641231951 3833.307009417977 1.1091608879867314 0.8964834939041424 1.069424084506982 1.1195171156034749 1.2374347154037988 1.0170823412979262 1.068166493305455 1.1195449239457091 1.1771658929928444 0.9290861995874159 1.0 11.90437383282076 -5.981859606474779 24.708085744062576 1.0949205667464696 0.9978550387869971 0.09004479366016516 0.09255790753953981 285.8421945089075 389325.132515036 0.01196509638817683 0.03719090405546414 1.0426544317721323e-06 5.981859606474779 -0.09706552795947254 SSGTPGCSSGTERPQS(ph)PGSSK ddPTM_A549_MK2206_60min_R1 2 SSGTPGCSSGTERPQSPGSSK 21 1 Q8IYD8-2;Q8IYD8-3;Q8IYD8 Q8IYD8-2 FANCM Fanconi anemia group M protein 1 SSGTPGCS(0.001)S(0.001)GT(0.001)ERPQS(0.956)PGS(0.02)S(0.022)K;SSGTPGCS(0.001)S(0.001)GT(0.001)ERPQS(0.984)PGS(0.007)S(0.008)K 63.122 0.00046671 14906800.0 2082.91 2731.22 2664.98 2746.1800000000003 3098.71 2706.35 2962.2400000000002 2434.41 3293.6 3648.91 3047.62 True False 2434.454285739746 2870.22743201617 3042.9142370039335 3418.9942232807057 2642.893863836317 2992.7341606702644 3500.4406641443693 2779.495072567949 2547.604858798436 2824.618696721945 2290.8118439669684 1.062703727567618 1.252930239371312 1.3283126001891798 1.4924814677752316 1.1536931201035057 1.3064076687711665 1.5280349948264205 1.2133231630908345 1.1120969474240112 1.2330208193050856 1.0 11.161643252286202 -8.801358896702368 2.2872036121311576 1.0453723675005702 1.306524515965143 0.22679929993119208 0.13840451136440401 0.19385545881110208 1.9815252599432296 0.023654495260148525 0.025260249325339698 1.5799418511768787e-09 8.801358896702368 0.2611521484645729 SSGTPGCSSGTERPQS(ph)PGSSK ddPTM_A549_PD325901_60min_R1 2 SSGTPGCSSGTERPQSPGSSK 21 1 Q8IYD8-2;Q8IYD8-3;Q8IYD8 Q8IYD8-2 FANCM Fanconi anemia group M protein 1 SSGTPGCSSGTERPQS(0.995)PGS(0.004)S(0.001)K;SSGTPGCSSGT(0.001)ERPQS(0.993)PGS(0.004)S(0.001)K 151.91 7.8955e-23 48556000.0 4796.4 4907.799999999999 5569.1 4632.4 6465.700000000001 4670.5 4747.0 5522.1 4957.9 5233.5 6196.6 True False 5283.326997076939 5321.397529925596 5947.05261571883 4918.532827056275 6011.57153745409 4632.464996499341 4927.649682658069 5411.957383496351 4749.536704561677 4903.055916845301 5434.457483483821 0.9721903268419724 0.9791957239702708 1.0943231470285426 0.9050641838683027 1.1061953388584251 0.8524245539831966 0.90674178565827 0.9958597339190064 0.8739670370034677 0.9022162620181436 1.0 12.40792030428384 -7.268652261247264 24.991299019318447 0.9353976358006565 1.0083049567221454 0.29208036594766984 0.06755568615954988 695.5704494396317 2410020.645755864 0.010461696678250622 0.016939615957124402 5.387009466844993e-08 7.268652261247264 0.07290732092148888 SSGVSGGKPGLLPAHS(ph)R ddPTM_A549_PD325901_60min_R1 1 SSGVSGGKPGLLPAHSR 17 1 Q8IWB9;J3KRZ8 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 SSGVSGGKPGLLPAHS(1)R 49.125 0.0090045 7791200.0 1352.2 1288.7 1275.9 1412.1 1576.3 1586.8 1334.2 1245.4 1449.1 1461.2 1532.8 True False 1489.4743485629715 1397.303271693043 1362.4902466099816 1499.3222098882138 1465.5861259397864 1573.8776269018624 1384.9737111022534 1220.559520002601 1388.199366380994 1368.9395826300477 1344.2753172197658 1.1080128672179348 1.0394472425358146 1.013549999138486 1.115338644310688 1.0902425322893794 1.170800063603757 1.0302753411902705 0.9079684082327464 1.0326748907746606 1.0183476294582963 1.0 10.392612927325093 -7.985486157173163 24.988939190016065 1.0059594490126775 1.0863261708099106 0.466502123036996 0.0490474342754461 194.99454146254732 335726.8268320323 0.0078075921070295574 0.010785406405969653 1.033984057961455e-08 7.985486157173163 0.08036672179723303 SSGVVPQS(ph)APPVPTASSR ddPTM_A549_MK2206_60min_R1 1 SSGVVPQSAPPVPTASSR 18 0 P41162 P41162 ETV3 ETS translocation variant 3 1 SSGVVPQS(1)APPVPTASSR 129.43 1.8042e-12 21804000.0 10568.0 9468.1 10985.0 9911.8 13604.0 10780.0 11222.0 11438.0 16475.0 13828.0 15997.0 True False 12351.62003720644 9949.985848475144 12542.838180207065 12340.191444957605 11602.869621109827 11920.732444815132 13260.892140079166 13059.3715274059 12743.438805168886 10704.245196036916 12024.503405260353 1.0272041697624688 0.8274758227539217 1.0431065431542026 1.0262537278303858 0.9649354513911922 0.991370041909604 1.1028224362494612 1.0860632732402755 1.0597891967491997 0.8902026832437949 1.0 13.55368969353962 -7.5428995892945485 24.825154444137997 1.0396330165273704 0.9760034264636307 0.08309046929136599 0.07524960278736863 278.6257202156666 345485.1146863584 0.00944557365219524 0.014010952352660411 2.8648402564230552e-08 7.5428995892945485 -0.0636295900637397 SSIETKPDAS(ph)PQLPK ddPTM_A549_MK2206_60min_R1 4 SSIETKPDASPQLPK 15 1 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;E9PRD6 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 SSIETKPDAS(1)PQLPK;SSIETKPDAS(1)PQLPK;SSIETKPDAS(1)PQLPK;SSIETKPDAS(1)PQLPK 169.58 1.0162999999999998e-27 360685900.0 23108.36 23507.399999999998 24290.5 22439.74 31338.199999999997 25602.54 26846.839999999997 24219.75 34754.8 34989.39 34702.0 True False 27008.486222840605 24703.826251776463 27735.258153511124 27937.477307358222 26728.392293462497 28311.783789209396 31724.563316874246 27652.973732373597 26882.89329201116 27085.26249781327 26084.535673522856 1.035421391466654 0.9470678934435516 1.0632835677295125 1.0710360213816723 1.0246834610360034 1.0853857681640586 1.216221124805235 1.0601290388482087 1.0306065489714151 1.0383647551490136 1.0 14.670907131969424 -2.2418659348551233 16.383352483748737 1.037183986849289 1.0462526257289113 0.0 0.06497476308980392 0.0 0.0 0.00905689607010248 0.0 0.005729728783555368 2.2418659348551233 0.009068638879622393 SSIETKPDAS(ph)PQLPK ddPTM_A549_PD325901_60min_R1 4 SSIETKPDASPQLPK 15 1 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;E9PRD6 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 SSIETKPDAS(1)PQLPK;SSIETKPDAS(1)PQLPK;SSIETKPDAS(1)PQLPK;SSIETKPDAS(1)PQLPK 130.09 7.7334e-10 517120000.0 56420.7 52752.8 55622.2 52544.8 63612.9 57177.6 58640.8 61474.4 59222.1 57760.5 64878.3 True False 62148.48792927588 57198.463591967724 59397.05697546023 55790.37295810089 59144.94935659142 56711.96458277283 60872.40773347701 60248.24486626612 56733.2010874003 54113.49217253141 56898.680397428965 1.092265892551071 1.005268719633651 1.043909218290837 0.9805213858812417 1.039478401668942 0.996718450878791 1.0698386554537318 1.05886893062266 0.9970916845720706 0.9510500383235003 1.0 15.796107573273549 -2.000000203998711 0.08354693875248023 0.9697744622535286 1.1749206413294238 0.24798520425115633 0.035219619679007635 193.42649024037712 1.1384586494241684 0.39336261847660703 4.572330383514539 0.009999995302757199 2.000000203998711 0.20514617907589516 SSIETKPDAS(ph)PQLPKK ddPTM_A549_MK2206_60min_R1 2 SSIETKPDASPQLPKK 16 2 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;E9PRD6 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 SSIET(0.015)KPDAS(0.985)PQLPKK;SSIETKPDAS(1)PQLPKK 111.45 7.9371e-08 149660000.0 16273.3 19373.4 19306.5 16087.0 24589.6 18693.1 18512.1 17233.3 28135.2 25110.6 28474.0 True False 19019.835196013573 20359.42330951812 22044.452009664787 20028.315722172865 20972.502413646158 20671.19143452448 21875.508945496294 19676.173049767796 21762.6221226821 19438.098019930887 21403.119957578518 0.8886477875053417 0.9512362379817041 1.0299644188958155 0.9357661762336263 0.9798806181161507 0.9658027182716942 1.0220710339826184 0.9193133098710109 1.0167967177596595 0.9081899301810974 1.0 14.385533494832023 -3.9136893656430187 0.8457203999919966 0.9964199893129068 2.0556688095874014e-87 0.0997050828434144 0.04413067686470507 12.818746809921773 1.1164355834535562 0.005323719012139562 19.920329230548894 0.00012198618078036016 3.9136893656430187 -0.9964199893129068 SSIETKPDAS(ph)PQLPKK ddPTM_A549_PD325901_60min_R1 2 SSIETKPDASPQLPKK 16 2 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;E9PRD6 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 S(0.008)S(0.008)IET(0.025)KPDAS(0.96)PQLPKK;SSIET(0.002)KPDAS(0.998)PQLPKK 89.831 2.2782e-06 247060000.0 22599.9 19241.2 22540.0 22544.0 25723.0 25543.0 26132.0 27294.0 25630.0 24935.0 26486.0 True False 24894.225210832945 20862.723450997266 24069.699944030872 23936.4916788612 23916.30521953253 25334.98627675467 27126.46755997908 26749.599758271226 24552.860230725866 23360.599844566284 23228.389908587353 1.071715487332583 0.898156244711756 1.0362190422476287 1.030484324271312 1.0296152817157103 1.0906905892512389 1.1678152324260167 1.1515907845331161 1.0570194631376006 1.0056917391390117 1.0 14.503601535788283 -5.976346498855309 24.680162197263453 1.0507474963835088 0.9804987624594121 0.1603791815551634 0.06471777136757727 297.1535442025256 310046.6331125629 0.009559976771860969 0.029720941788579987 1.0559746709281206e-06 5.976346498855309 -0.0702487339240967 SSILLDVKPWDDETDMAK ddPTM_A549_PD325901_60min_R1 1 SSILLDVKPWDDETDMAK 18 1 P24534 P24534 EEF1B2 Elongation factor 1-beta 0 60.306999999999995 0.00061854 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSINSVDGES(ph)PNGSSDR ddPTM_A549_MK2206_60min_R1 1 SSINSVDGESPNGSSDR 17 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 SSINSVDGES(1)PNGSSDR 198.51 3.8443999999999997e-48 22285000.0 1359.5 1638.4 1131.0 1471.8 1977.1 1316.3 1654.1 1317.6 2235.2 1924.0 2337.4 True False 1588.9503634161758 1721.7875618277892 1291.3928067195425 1832.3910660716124 1686.2712090485331 1455.5899923107752 1954.628558982796 1504.3738349807684 1728.9307688809395 1489.367063723967 1756.9590710417926 0.9043752865990238 0.9799816001444197 0.7350158737356405 1.0429332682093113 0.9597669273244112 0.828471201351139 1.1125065980186977 0.8562372680023483 0.984047265173779 0.8476959357060285 1.0 10.778864868328922 -7.519388318730534 0.31262571109091597 1.0039807291311038 0.8843127198258538 0.0 0.10691647716458813 3.2575630307141674 0.6566043710590621 0.05101215823895275 0.13802084160295627 3.024208162669902e-08 7.519388318730534 -0.11966800930525001 SSINSVDGES(ph)PNGSSDR ddPTM_A549_PD325901_60min_R1 2 SSINSVDGESPNGSSDR 17 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 SSINSVDGES(1)PNGSSDR;SSINSVDGES(1)PNGSSDR 398.74 0.0 67263000.0 8221.3 7731.2 7254.8 8237.3 9774.7 8655.5 7735.799999999999 8295.4 9640.1 9505.599999999999 9759.099999999999 True False 9055.920323798822 8382.735356648762 7747.154354656396 8746.099312734365 9088.158792884364 8585.012477721884 8030.190102192187 8129.941739384588 9234.960121350776 8905.414793764154 8558.79256803197 1.0580838654302336 0.9794296672125458 0.9051690753194404 1.0218847160056206 1.0618505730387293 1.0030635056851185 0.9382386637322919 0.9498935363559123 1.0790026803365191 1.040498963256436 1.0 13.06319156738898 -8.759404919513106 24.9999729061948 1.0373068198286364 0.9887492364750043 0.17498751042421246 0.048362342109815215 78.29866644198789 962158.1753615767 0.009204969627704155 0.010192166509821753 1.7401836363273096e-09 8.759404919513106 -0.04855758335363203 SSIS(ph)GSLPSSGSLQAVSSR ddPTM_A549_PD325901_60min_R1 1 SSISGSLPSSGSLQAVSSR 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 SS(0.001)IS(0.571)GS(0.394)LPS(0.019)S(0.014)GSLQAVSSR 138.23 3.8805e-17 4325400.0 2657.1 3253.5 3211.4 3145.9 3508.8 3652.4 3156.6 3384.1 3456.9 3866.0 3312.6 True False 2926.846835946363 3527.683863159241 3429.3449157169835 3340.215098142719 3262.353992702862 3622.656065349359 3276.726140357797 3316.601470724906 3311.618514693571 3621.9001002243112 2905.171200301536 1.0074610527746446 1.2142774452648755 1.180427823104209 1.149748110471434 1.1229472439917665 1.246968187270118 1.1278943354586801 1.1416199741965867 1.13990477199755 1.2467079736465734 1.0 11.504407468102007 -10.465907600016665 0.6019658522147894 0.987483872774922 1.1557074499671942 0.0 0.09277333540119866 0.6020148039987097 0.3557111352531361 0.052710293017826135 0.011825691193574182 3.420522093984292e-11 10.465907600016665 0.1682235771922722 SSISGS(ph)LPSSGSLQAVSSR ddPTM_A549_PD325901_60min_R1 1 SSISGSLPSSGSLQAVSSR 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 SSIS(0.003)GS(0.881)LPS(0.106)S(0.009)GSLQAVSSR 136.62 6.567499999999999e-17 6581000.0 2431.7 2859.5 2656.5 2574.5 4179.3 3284.4 3540.2 2667.2 2967.8 3768.3 3468.2 True False 2678.564393877073 3100.4801004161213 2836.78606483221 2733.5210178862762 3885.7603858022876 3257.6529353393476 3674.924248271771 2614.000603622077 2843.0736868025074 3530.368894897897 3041.633386731204 0.8806335456344015 1.0193470764562322 0.9326521983903061 0.8987016745052068 1.2775242416635404 1.0710209026342574 1.2082074928238327 0.8594068617951695 0.9347193843956041 1.1606819251454659 1.0 11.570630557705162 -3.592801889968304 12.085111041494478 0.993151343251568 0.6861204071438507 0.0 0.13768323291238585 0.0 0.0 0.01649308184992865 0.0 0.0002553866021808186 3.592801889968304 -0.30703093610771726 SSKAS(ph)LGS(ph)LEGEAEAEASSPK ddPTM_A549_PD325901_60min_R1 2 SSKASLGSLEGEAEAEASSPK 21 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 S(0.031)S(0.035)KAS(0.938)LGS(0.993)LEGEAEAEAS(0.002)SPK;S(0.042)S(0.015)KAS(0.945)LGS(0.999)LEGEAEAEASSPK 132.16 4.4116000000000005e-18 27598000.0 7736.299999999999 7518.799999999999 7241.799999999999 6851.2 8063.4 8307.8 7449.5 7922.700000000001 6687.4 7700.0 7765.6 True False 8521.683480836944 8152.435663230894 7733.272096481045 7274.383063795857 7497.054601219858 8240.144031242307 7732.994799022818 7764.675533262087 6406.351834059939 7213.820685909775 6810.480430194289 1.25126025515851 1.1970426678104884 1.135495825257137 1.0681159924555181 1.100811415297758 1.2099211084594854 1.1354551089727178 1.140106870998024 0.9406607800614706 1.0592234659286703 1.0 12.733540858202094 -8.74555744030774 13.472425917021337 0.9719787028744167 1.152063689780749 0.5879862126095794 0.05637170636199108 0.45009845208526267 380.75149177357866 0.009178935903509442 0.01032663628428867 1.7965634488280953e-09 8.74555744030774 0.18008498690633234 SSKKGT(ph)ENGVNGTLTSNVADSPR ddPTM_A549_PD325901_60min_R1 1 SSKKGTENGVNGTLTSNVADSPR 23 2 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 S(0.323)S(0.323)KKGT(0.355)ENGVNGTLTSNVADSPR 63.901 0.0002565 3090900.0 1206.5 836.96 641.1 1080.7 1122.4 902.58 904.43 613.63 1134.1 836.17 1028.8 True False 1328.9829918216428 907.493556511376 684.60890124748 1147.4523845522235 1043.5664960697939 895.229687729445 938.8485785730857 601.3906682665778 1086.4377209389863 783.3740834983352 902.2641221005318 1.4729423006732005 1.005795901978979 0.7587677316190566 1.2717477692461903 1.1566086587154774 0.9922035752073238 1.0405473913640528 0.6665350572363441 1.2041238195415396 0.8682314461031514 1.0 9.81740600891686 -7.251743109537299 23.63461324261252 1.0516493591141116 1.1129943489495724 0.05542712308701292 0.21429879848469022 1513.2606239137674 3688553.9857830945 0.03128093292699991 0.05368250875653518 5.600888028625802e-08 7.251743109537299 0.06134498983546077 SSKPEGEAGRS(ph)PGEADEGR ddPTM_A549_MK2206_60min_R1 3 SSKPEGEAGRSPGEADEGR 19 2 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 SSKPEGEAGRS(1)PGEADEGR;SSKPEGEAGRS(1)PGEADEGR;SSKPEGEAGRS(1)PGEADEGR 138.99 5.3900999999999995e-18 86442000.0 10185.6 10240.1 9543.9 9128.7 13069.2 9429.9 9717.4 10444.4 13605.2 15029.599999999999 14092.800000000001 True False 11904.680265988814 10761.27735099655 10897.36853054876 11365.231909802918 11146.737992664557 10427.765758938984 11482.925795937022 11924.92568463353 10523.643923039985 11634.40292148947 10593.168818506801 1.1238072827831023 1.0158695226489787 1.0287165924808548 1.0728831102877623 1.0522571841950297 0.9843858752369876 1.0839934671744087 1.1257184595982348 0.9934368179476802 1.098292977372699 1.0 13.370846598237753 -8.878488682743358 21.576894384275167 0.9968937262552341 1.0568899373788232 0.0 0.050690512907717845 2.6145585528441475 474.62606503466657 0.0068293512705483814 0.007270335044556757 1.3228521796948808e-09 8.878488682743358 0.059996211123589105 SSKPEGEAGRS(ph)PGEADEGR ddPTM_A549_PD325901_60min_R1 2 SSKPEGEAGRSPGEADEGR 19 2 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 SSKPEGEAGRS(1)PGEADEGR;SSKPEGEAGRS(0.999)PGEADEGR 128.97 6.3462e-17 69943000.0 6784.3 6400.4 7296.200000000001 7280.4 8026.8 7731.4 7072.6 6928.2 7312.3 8011.200000000001 8874.7 True False 7473.0371416623075 6939.784170205752 7791.364007614825 7730.0937730119385 7463.025258956717 7668.438041737496 7341.751663275218 6790.011615932241 7004.989460208225 7505.371464800057 7783.168161358468 0.9601536272547874 0.8916400142374012 1.0010530218654465 0.9931808760589254 0.9588672766970162 0.9852592007210407 0.9432857560145269 0.8723968794151195 0.9000177453426086 0.9643080181747063 1.0 12.92614181266248 -7.856961907473576 24.999869409222576 0.9436307655371463 0.9643298223793574 0.0975649137447322 0.04104501748661026 47.84880932785474 12488.13608463012 0.008015439693590191 0.011074922076280962 1.390074551089434e-08 7.856961907473576 0.020699056842211072 SSKS(ph)AEDLTDGSYDDVLNAEQLQK ddPTM_A549_MK2206_60min_R1 2 SSKSAEDLTDGSYDDVLNAEQLQK 24 1 Q8N2F6-6;Q8N2F6-4;Q8N2F6-5;Q8N2F6-2 Q8N2F6-6 1 S(0.117)S(0.117)KS(0.765)AEDLTDGSYDDVLNAEQLQK;S(0.303)S(0.303)KS(0.332)AEDLT(0.058)DGS(0.003)Y(0.001)DDVLNAEQLQK 270.0 3.468599999999999e-125 11547200.0 2934.4 3048.7 2894.7 3186.4 3878.8 3119.5 2627.55 3464.3 4777.1 4371.9 4328.1 True False 3429.6549808079635 3203.8658079494517 3305.2119872776852 3967.0681430429318 3308.2336582152884 3449.6034194434897 3104.9418234419013 3955.375133973797 3695.094477461138 3384.284753583582 3253.3133205168065 1.0542037126209363 0.9848008760006246 1.0159525571771963 1.2193932007793031 1.0168813551870737 1.0603354425436962 0.9543937265005463 1.2157990160460364 1.1357942237405378 1.0402578602684263 1.0 11.6676940569914 SSKS(ph)AEDLTDGSYDDVLNAEQLQK ddPTM_A549_PD325901_60min_R1 1 SSKSAEDLTDGSYDDVLNAEQLQK 24 1 Q8N2F6-6;Q8N2F6-4;Q8N2F6-5;Q8N2F6-2 Q8N2F6-6 1 S(0.317)S(0.317)KS(0.357)AEDLT(0.009)DGSYDDVLNAEQLQK 88.51700000000001 9.1196e-08 1992900.0 1315.6 1396.9 1709.4 1741.6 1870.4 1315.6 1459.4 1915.2 1158.4 1590.9 2049.1 True False 1449.1587435064678 1514.621665420977 1825.4101634572492 1849.174676539419 1739.029556529706 1304.8861897857894 1514.9382656143237 1876.999833554665 1109.7164764445129 1490.4503024953076 1797.0736903151228 0.8063991762365366 0.8428266873994372 1.0157681197464739 1.0289921256457546 0.9677007492245694 0.7261172409446233 0.8430028628089671 1.0444757183137698 0.6175130616095773 0.8293762857515053 1.0 10.811433853483479 -7.2312316894991975 24.169470250253614 0.830072923099338 0.9373693139427398 0.10559055458995936 0.12524613207289897 926.226154901102 741082.4175621693 0.02377540510861682 0.041176044044097526 5.8717601948428295e-08 7.2312316894991975 0.10729639084340181 SSKT(ph)FKPK ddPTM_A549_MK2206_60min_R1 1 SSKTFKPK 8 2 D6RCK3;Q9H8S9-2;Q9H8S9;Q7L9L4;Q7L9L4-2 D6RCK3 MOB1B;MOB1A MOB kinase activator 1A;MOB kinase activator 1B 1 S(0.197)S(0.191)KT(0.612)FKPK 62.408 0.019406 19477000.0 3875.6 4208.7 4961.5 4280.2 6352.5 4416.7 3324.6 4164.4 6239.3 6616.1 6133.4 True False 4529.7065306772565 4422.90485318885 5665.115305516368 5328.849192145478 5418.055665105868 4884.072262431817 3928.636785680554 4754.716452940123 4826.108512114734 5121.518414918992 4610.30750677151 0.9825172234225442 0.9593513766039669 1.2287933716342307 1.1558554791233755 1.1752048333322576 1.0593810185672448 0.8521420273832637 1.0313230616301643 1.04680837558585 1.1108843406641808 1.0 12.170647266053937 -7.5247515495075845 24.99826798245261 1.009473745293993 1.1041876553548375 0.18053597198222415 0.09342922803666995 77.65484558437454 1036534.7502747152 0.013967882938401791 0.02079654200431079 2.987090980442296e-08 7.5247515495075845 0.09471391006084451 SSLAETLDS(ph)T(ph)GSLDPQR ddPTM_A549_MK2206_60min_R1 1 SSLAETLDSTGSLDPQR 17 0 Q9UGH3-2;Q9UGH3 Q9UGH3-2 SLC23A2 Solute carrier family 23 member 2 2 SSLAET(0.004)LDS(0.665)T(0.665)GS(0.665)LDPQR 55.401 0.016954 1520600.0 1042.7 1006.6 1071.1 765.61 991.91 771.95 1026.2 936.98 1321.8 974.31 1553.3 True False 1218.6822684325462 1057.8316404637765 1222.9980860099931 953.184484369539 846.001352975232 853.6372366210612 1212.6472566520438 1069.7997843809044 1022.414410480864 754.212694312317 1167.5727411008888 1.043774169721937 0.9060091960235052 1.0474705711755865 0.816381241883734 0.7245812814861955 0.7311212454447832 1.0386053167947846 0.9162596442361307 0.8756751288290981 0.6459663434769639 1.0 10.189296718927999 -10.839721978143258 0.8178229138475785 1.0082499331865495 0.894690200608323 0.0 0.1514055037292535 1.4874742430755075 1.5447390266635304 0.11279735193186126 0.020740284207032614 1.4463653926993736e-11 10.839721978143258 -0.11355973257822649 SSLAETLDS(ph)TGS(ph)LDPQR ddPTM_A549_PD325901_60min_R1 1 SSLAETLDSTGSLDPQR 17 0 Q9UGH3-2;Q9UGH3 Q9UGH3-2 SLC23A2 Solute carrier family 23 member 2 2 SSLAET(0.005)LDS(0.75)T(0.251)GS(0.993)LDPQR 110.97 5.826899999999999e-09 9741400.0 2404.1 3193.6 2374.2 2310.3 2709.9 3145.4 2979.5 2837.4 2774.0 2983.6 3726.5 True False 2648.1624621951196 3462.7358799401754 2535.327489224405 2453.0019839280094 2519.5659726474814 3119.784905254046 3092.8865029449603 2780.805831102761 2657.418426844852 2795.21498681564 3268.1641242298115 0.8102905366844745 1.0595354909711634 0.7757650450991014 0.7505749070989798 0.7709423018163913 0.9545986023542398 0.9463681704399843 0.8508770445419711 0.8131226969732158 0.8552859894924558 1.0 11.674264720797725 -7.272985443879383 24.68956498073179 0.9101871903528731 0.8381777909900661 0.12207065321818777 0.09203175946019336 1192.8047842970088 2550634.266191172 0.01575810766458407 0.025320052087679307 5.333527714162654e-08 7.272985443879383 -0.07200939936280704 SSLAETLDSTGS(ph)LDPQR ddPTM_A549_MK2206_60min_R1 2 SSLAETLDSTGSLDPQR 17 0 Q9UGH3-2;Q9UGH3 Q9UGH3-2 SLC23A2 Solute carrier family 23 member 2 1 SSLAETLDSTGS(1)LDPQR;SSLAETLDSTGS(0.999)LDPQR 360.74 2.7697999999999986e-245 67302000.0 7972.0 9474.7 8570.0 6992.0 8424.7 5289.9 5597.5 5812.1 8913.4 8376.900000000001 7378.5 True False 9317.478703312798 9956.921760284276 9785.354866124211 8705.040313882811 7185.437790132608 5849.673706848573 6614.493294786414 6635.982973809749 6894.5291317749525 6484.5524719902805 5546.214813759678 1.6799707577494007 1.795264354994332 1.7643303035878803 1.5695461871196121 1.2955570657498083 1.054714594237504 1.19261397491789 1.1964886317324837 1.2431053183641976 1.1691852352892407 1.0 12.43728778000523 -6.74216081173582 2.0098191108064287 1.1266456535448346 1.7516445345462925 0.9311356630870753 0.0721279975779603 0.07418502492764988 0.6095326510678679 0.014719913718260067 0.034440098312076936 1.8106695088696493e-07 6.74216081173582 0.624998881001458 SSLAETLDSTGS(ph)LDPQR ddPTM_A549_PD325901_60min_R1 2 SSLAETLDSTGSLDPQR 17 0 Q9UGH3-2;Q9UGH3 Q9UGH3-2 SLC23A2 Solute carrier family 23 member 2 1 SSLAETLDS(0.011)T(0.204)GS(0.784)LDPQR;SSLAETLDSTGS(1)LDPQR 317.07 2.3278999999999992e-172 87090000.0 8897.4 8746.6 8248.3 9488.9 11237.4 9316.8 8738.4 8563.8 8812.3 9482.2 11264.2 True False 9800.65749808031 9483.706678195364 8808.079239057226 10075.007802144517 10448.12379092543 9240.927069775198 9070.944593835955 8392.988290828864 8441.949676598739 8883.492273757625 9878.774809646977 0.992092408919942 0.9600083877743811 0.891616562658744 1.019864102206876 1.0576335620812476 0.9354325053296186 0.9182256675167707 0.8495980982006808 0.8545543186544624 0.8992504075588986 1.0 13.270116410920267 -7.5015057932713765 24.246904192929847 0.9214935876412268 0.9814100120246805 0.3105709865253422 0.05413978170244195 818.5908078840232 928664.3364154041 0.01045389195790657 0.01660468480460545 3.1513323427253615e-08 7.5015057932713765 0.05991642438345368 SSLALCLDS(ph)DSEDELKR ddPTM_A549_PD325901_60min_R1 1 SSLALCLDSDSEDELKR 17 1 Q86T82;Q86T82-2 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 1 SSLALCLDS(0.941)DS(0.059)EDELKR 66.045 0.00096228 4841300.0 2535.8 2510.3 2952.2 2506.7 2386.0 2718.2 1943.7 2264.4 2329.0 2595.5 2680.0 True False 2793.232549242706 2721.8517908986155 3152.55404502076 2661.533165871248 2218.4155912531423 2696.063880416338 2017.6685671334526 2219.234765612564 2231.1202293156675 2431.6196870492 2350.3769899197373 1.1884189477782847 1.1580490289736727 1.341297187022077 1.1323856459138226 0.9438552201487042 1.1470772101578504 0.8584446562346382 0.9442037490710579 0.9492605819766206 1.0345658153895716 1.0 11.19867646182141 -6.6039064863419 4.191180016343256 0.9755647863504259 1.2248134024929067 0.653548098865808 0.07975499730906885 0.08983853714676249 3.004191740494731 0.010592034699817609 0.022947707116203878 2.4893932845937434e-07 6.6039064863419 0.24924861614248084 SSLCGEEQGS(ph)PEELR ddPTM_A549_MK2206_60min_R1 1 SSLCGEEQGSPEELR 15 0 Q2M1P5 Q2M1P5 KIF7 Kinesin-like protein KIF7 1 SSLCGEEQGS(1)PEELR 64.39399999999999 0.0041227 1089200.0 691.24 919.55 750.87 363.58 529.66 622.24 653.03 558.45 884.55 931.42 985.43 True False 807.9044128045583 966.3511672843889 857.354656747572 452.65711632172633 451.74771563635926 688.0850237905163 771.677098042764 637.611997681398 684.2008373360934 721.011575100716 740.7205345155793 1.0907007098607255 1.3046096635033466 1.157460360280507 0.611103776970025 0.609876052554417 0.9289401221211102 1.0417925007944189 0.8607996781112423 0.9236963273652877 0.9733921789710438 1.0 9.53278552243108 -6.028560176415801 24.5402102751033 0.9136903776896199 1.2060002247320236 0.45968491484483787 0.14691788194807356 402.48776798982516 345836.230563431 0.0219200806912897 0.058135389514764504 9.363534685345802e-07 6.028560176415801 0.2923098470424037 SSLCGEEQGS(ph)PEELR ddPTM_A549_PD325901_60min_R1 1 SSLCGEEQGSPEELR 15 0 Q2M1P5 Q2M1P5 KIF7 Kinesin-like protein KIF7 1 SSLCGEEQGS(1)PEELR 82.55 0.00027674 1529600.0 1022.3 1194.7 1117.7 705.7 667.95 899.03 836.96 1015.3 1030.9 940.85 858.07 True False 1126.0831434225165 1295.3815618000147 1193.5538432761014 749.2894862390146 621.0354963024041 891.7085977524468 868.810970802086 995.0490450125579 987.5748580513189 881.4445704335343 752.532829753891 1.496390720642436 1.721362192561961 1.5860488686805096 0.9956900969809689 0.8252603364899151 1.1849431180883792 1.1545157054293866 1.3222666250161865 1.3123345839600065 1.1713038097245574 1.0 9.555610711567315 -6.24698371937281 21.823718401696144 1.1349470852697527 1.613277217185826 0.6853125889735674 0.14471118761090396 76.96889346266214 116197.82095632747 0.023801008651404772 0.06250878778301945 5.662605163481662e-07 6.24698371937281 0.4783301319160733 SSLFS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SSLFSPR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 SSLFS(1)PR;SSLFS(1)PR 79.893 0.016115 44725000.0 1404.13 1541.96 1379.3600000000001 1066.14 1562.71 1306.8 1193.78 1343.69 1672.5900000000001 1703.8600000000001 1905.31 True False 1641.1128163174371 1620.439177756333 1574.9739892808748 1327.3443478608435 1332.837429109419 1445.0847086163658 1410.6743734613885 1534.1621723780409 1293.7510355773861 1318.9568426178369 1432.1689431191242 1.1458933139153638 1.1314581185004435 1.0997124304697847 0.9268071020797428 0.9306426001716175 1.0090183253583982 0.9849915963050263 1.0712159202648155 0.9033508524208901 0.9209505966141659 1.0 10.483985972113286 -6.145612557734478 4.456465356603137 0.9648338603767463 1.1335548924362244 0.6974538589151773 0.046390578615397415 0.10264891078181802 3.2936922903360557 0.007209245979057982 0.020069302276729945 7.151340260795916e-07 6.145612557734478 0.16872103205947808 SSLFS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SSLFSPR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 SS(0.001)LFS(0.999)PR;S(0.001)S(0.003)LFS(0.996)PR 114.99 0.0073128 65679000.0 2189.97 2337.73 2188.8999999999996 2200.98 2656.8999999999996 2340.55 2034.1799999999998 2388.0699999999997 2183.5699999999997 2703.4 2464.3999999999996 True False 2412.294142229295 2534.73871136415 2337.4519169249847 2336.9295358117447 2470.2885098074075 2321.48933680688 2111.5918330460077 2340.438070445327 2091.8021464692183 2532.706862634871 2161.2944231187307 1.1161339780576374 1.1727873279321852 1.0815055514519212 1.0812638531864502 1.1429671419976186 1.0741198940665333 0.9770033228508485 1.082887201951918 0.9678469180754949 1.1718472206022699 1.0 11.077679901903593 -7.690744520084664 0.9333318209890161 0.9869807685988474 1.1248697163371857 0.014054452374647308 0.06822894073484655 0.21786287041678154 0.3823542134023232 0.007173916514147887 0.013008535911118824 2.038240749258044e-08 7.690744520084664 0.13788894773833826 SSLFS(ph)PRR ddPTM_A549_MK2206_60min_R1 2 SSLFSPRR 8 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 SSLFS(1)PRR;SSLFS(1)PRR 54.066 0.0099246 8777100.0 1111.52 1101.29 975.23 836.1800000000001 1073.44 823.4300000000001 705.8 503.90999999999997 885.3799999999999 1399.22 1567.49 True False 1299.1174019450882 1157.3409570100862 1113.5322784236073 1041.044137537547 915.5383979773695 910.5648160514027 834.03472397682 575.340785659653 684.8428436613306 1083.135230199505 1178.238972476812 1.1025924555985225 0.9822633472878635 0.9450818589736657 0.8835594152425092 0.77703964931052 0.7728184496709327 0.7078655039084051 0.4883056825477531 0.5812427356919807 0.9192831467139586 1.0 10.202416463424674 -6.129536105519363 1.08996668495261 0.7617868115441034 1.0788117262444785 0.43565853229778917 0.13400485629266395 0.6739157962322561 1.2968440080584371 0.027648400538687275 0.17101006631956575 7.421024997180873e-07 6.129536105519363 0.3170249147003751 SSLFS(ph)PRR ddPTM_A549_PD325901_60min_R1 2 SSLFSPRR 8 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(0.001)S(0.001)LFS(0.998)PRR;SSLFS(1)PRR 71.34899999999999 0.0025797 23002000.0 516.13 426.94 972.03 581.98 855.37 951.49 721.62 1025.05 672.4300000000001 912.23 682.48 True False 568.5271376451759 462.9197321460605 1037.9978010912305 617.9275828275217 795.2917620663034 943.7413809055047 749.0816439856154 1004.604573613831 644.1701055383144 854.6316421178545 598.5392865971723 0.9498576791464732 0.773415784915074 1.734218328411618 1.032392687772554 1.3287210712394706 1.576740912481923 1.2515162509119653 1.6784271243500644 1.0762369654973916 1.427862232697579 1.0 9.225302134886283 -8.971604709492853 24.993653355132672 1.0336336894751992 1.2946106080427693 0.0 0.3073334663204999 252.3964100600842 222162.29482070924 0.04839309147147032 0.05074311931371251 1.0675673683276006e-09 8.971604709492853 0.2609769185675701 SSLGDMFS(ph)PIRDDAVVNK ddPTM_A549_MK2206_60min_R1 2 SSLGDMFSPIRDDAVVNK 18 1 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 S(0.002)S(0.002)LGDMFS(0.997)PIRDDAVVNK;S(0.005)S(0.005)LGDMFS(0.991)PIRDDAVVNK 55.126999999999995 0.0029479 2875300.0 1382.06 1504.69 1400.71 1301.53 1991.25 1708.9 1322.94 1240.37 1747.12 2207.2 2060.59 True False 1615.317939877131 1581.272293949374 1599.351740318418 1620.4049084279022 1698.339762792925 1889.7346637239884 1563.30107358727 1416.1962459738113 1351.4001095773397 1708.5919870330242 1548.8886336091416 1.0428883683607382 1.020907675114623 1.0325802033885998 1.0461726384111407 1.0964892671692865 1.2200584488250938 1.0093050201708467 0.9143305820986385 0.8724966277455183 1.1031083513420523 1.0 10.59701770153602 -8.001534593686923 24.988389430143293 0.9374182483939614 1.0751167937418042 0.2520771518987841 0.07640016337555527 40.128760599651955 653447.0010420425 0.010940570927137823 0.015002560191305818 9.964727030321165e-09 8.001534593686923 0.13769854534784287 SSLGDMFS(ph)PIRDDAVVNK ddPTM_A549_PD325901_60min_R1 2 SSLGDMFSPIRDDAVVNK 18 1 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 SSLGDMFS(1)PIRDDAVVNK;S(0.04)S(0.04)LGDMFS(0.92)PIRDDAVVNK 90.22 1.3545e-06 10735900.0 4434.4 4969.700000000001 5153.6 4966.6 6068.6 5525.3 5379.7 5302.5 5320.9 5173.9 6140.2 True False 4884.577023567254 5388.514060163666 5503.354287114354 5273.375602033006 5642.362471533456 5480.30378870738 5584.427427384798 5196.73747776922 5097.281076928181 4847.219071016703 5384.994325934761 0.9070718979298755 1.000653618929913 1.0219795888381085 0.9792722671286418 1.0477935778612022 1.0176990832308954 1.0370349696543864 0.9650404741823266 0.9465712995051975 0.9001344806756677 1.0 12.394729109292276 -8.300876545199614 24.918923326048365 0.97333511867544 1.0039197552396053 0.17543403085878184 0.04305354487245364 833.3403066259656 526556.2951750241 0.006382026589892019 0.0077155385269901886 5.001766975905671e-09 8.300876545199614 0.030584636564165324 SSLGQS(ph)AS(ph)ETEEDTVSVSK ddPTM_A549_MK2206_60min_R1 1 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 2 S(0.002)S(0.002)LGQS(0.655)AS(0.655)ET(0.655)EEDT(0.031)VS(0.002)VSK 62.891000000000005 0.0028274 4385200.0 544.61 741.43 648.73 831.18 1017.8 874.2 594.89 643.5 1436.9 1249.1 1108.1 True False 636.5268535638718 779.1656200964219 740.7296688799017 1034.819137313088 868.0829682715073 966.707263753005 702.9738126191137 734.7180956360987 1111.444444257795 966.927442462374 832.9281879958118 0.7642037605852672 0.9354535376828186 0.8893079614249126 1.2423869815272617 1.042206255932201 1.1606129768270803 0.8439788960805928 0.8820905646187509 1.3343820755209979 1.160877319795108 1.0 9.702048306868168 -4.395121009588825 0.5570592098718257 1.1218634488461874 1.4766085475195177e-13 0.26352128792441665 0.14827003659476287 8.430822776094601 0.8753035546433279 0.03120682603745425 7.647518003939023 4.0260483894630173e-05 4.395121009588825 -1.1218634488460397 SSLGQS(ph)AS(ph)ETEEDTVSVSK ddPTM_A549_PD325901_60min_R1 2 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 2 S(0.002)S(0.003)LGQS(0.86)AS(0.627)ET(0.504)EEDT(0.005)VSVSK;S(0.001)S(0.001)LGQS(0.999)AS(0.984)ET(0.017)EEDTVSVSK 122.22 4.4778e-23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSLGQS(ph)AS(ph)ETEEDTVSVSKK ddPTM_A549_MK2206_60min_R1 1 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 2 S(0.051)S(0.054)LGQS(0.842)AS(0.917)ET(0.135)EEDTVSVSKK 76.691 7.9599e-05 6861500.0 2772.3 3155.3 3540.0 2611.9 4128.1 3653.6 2905.1 2817.5 4870.8 4966.4 5206.5 True False 3240.196463772462 3315.891292624038 4042.025230581065 3251.815617252648 3520.8619584610024 4040.2215269366043 3432.9190657765107 3216.88925323187 3767.571577069292 3844.4867906853997 3913.58235791011 0.8279361892623507 0.8472777597031982 1.0328197699510135 0.8309051196227152 0.8996519394423006 1.032358886933996 0.8771807392370099 0.8219807222735231 0.9626912717076971 0.9823446753113411 1.0 11.934274090110547 -14.999995085495888 0.03736217720300814 1.5292685715214536 0.5976152396155688 0.1860405942334783 0.07249163689136615 692.3088903612007 1.9920042266506377 42.463758565863394 14.280745009164685 1.0000113161279348e-15 14.999995085495888 -0.9316533319058847 SSLGQS(ph)AS(ph)ETEEDTVSVSKK ddPTM_A549_PD325901_60min_R1 2 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 2 S(0.03)S(0.031)LGQS(0.93)AS(0.879)ET(0.125)EEDT(0.005)VS(0.001)VSKK;S(0.001)S(0.001)LGQS(0.994)AS(0.989)ET(0.014)EEDTVSVSKK 121.5 4.6875e-15 29103000.0 10426.9 10897.0 11703.6 11650.099999999999 12964.8 12422.4 11668.3 13416.5 13066.400000000001 14471.8 14345.6 True False 11485.431212121914 11815.328433024828 12497.87667546405 12369.7002177032 12054.197174131918 12321.2360930336 12112.343541638757 13148.897382459367 12517.264647629983 13558.048078227152 12581.182144250955 0.9129055664590507 0.9391270468509918 0.9933785658746723 0.9831906156255442 0.958113238956655 0.979338503469951 0.9627349324382497 1.0451241569909098 0.9949195953219563 1.0776450036869214 1.0 13.6189798656396 -2.3599480350461524 0.3965471139538334 0.9989283051424296 1.2613831336533951e-14 0.46048853019270997 0.0321966392194997 23.486687156091676 0.36457404020027623 0.004807777622044979 17.836771295306864 0.0043656806611178925 2.3599480350461524 -0.9989283051424169 SSLGQS(ph)ASET(ph)EEDTVSVSK ddPTM_A549_PD325901_60min_R1 1 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 2 SSLGQS(0.907)AS(0.142)ET(0.948)EEDT(0.003)VSVSK 109.72 1.1642000000000002e-09 11218000.0 1490.2 1409.5 1448.8 1499.4 1835.7 1576.7 1672.3 1742.5 1862.9 1687.1 1930.5 True False 1641.4840069727425 1528.2835116406795 1547.124280342145 1592.0145326155287 1706.7667648212046 1563.859877953219 1735.940291617672 1707.7444705351934 1784.6087914092557 1580.5762180777128 1693.0607384477792 0.9695363962415648 0.9026749465833284 0.9138031762289694 0.9403174360271971 1.0080954132726456 0.9236879944348522 1.0253266478845913 1.0086728914999685 1.0540725154641581 0.9335614382782311 1.0 10.725418015418132 -7.455810165228338 0.9507300540586295 1.0257427247281563 0.9297585291037926 0.24942010983634122 0.04212978079390056 0.275411605301236 0.49666157267192224 0.005950063569281634 0.0123327742852175 3.500981652467983e-08 7.455810165228338 -0.09598419562436367 SSLGQS(ph)ASETEEDTVSVSK ddPTM_A549_MK2206_60min_R1 1 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.5)AS(0.5)ETEEDTVSVSK 378.86 5.799099999999996e-284 22395000.0 4851.5 6836.4 6002.4 5554.8 7901.8 7326.7 6323.0 6825.6 8937.2 8928.6 9258.6 True False 5670.314592213001 7184.3435593746935 6853.630577412363 6915.726249364447 6739.455687451165 8102.006530930158 7471.8072537623 7793.149702523319 6912.938469775745 6911.62305881799 6959.434095639406 0.8147666195683737 1.0323172057734133 0.9847971089641704 0.9937196263842277 0.9683913368292296 1.1641760550626747 1.0736228191950166 1.1197964655497343 0.9933190507698328 0.9931300395744284 1.0 12.764754283177538 -5.259059534206355 24.462560419577763 1.0186673168508826 0.814766523747793 0.503775242094359 0.060712986874782736 109.68319461307 1127339.6154874507 0.008662045061936659 0.0799430523579808 5.5073219544250864e-06 5.259059534206355 -0.20390079310308962 SSLGQS(ph)ASETEEDTVSVSK ddPTM_A549_PD325901_60min_R1 3 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.991)AS(0.009)ETEEDTVSVSK;SSLGQS(0.635)AS(0.365)ETEEDTVSVSK;SSLGQS(0.94)AS(0.06)ETEEDTVSVSK 319.36 3.147199999999999e-183 46582000.0 8106.2 9476.2 9561.5 9223.6 10741.900000000001 9557.5 9412.7 10643.1 9211.9 10073.0 9745.1 True False 8929.135456530958 10274.792630726794 10210.400887970327 9793.320823684537 9987.426001543232 9479.666888779026 9770.90544932708 10430.815021149569 8824.755878245165 9436.989060931064 8546.514479278661 1.0447692422659525 1.202220233246946 1.1946859638190306 1.145884775299779 1.1685963939753585 1.1091851434596907 1.1432620248894445 1.2204759082125776 1.032556125616017 1.1041915489421321 1.0 13.061120451009815 -8.867504814536359 6.52593395857697 1.014330258934509 1.154829363005668 0.4223225849021529 0.05319782230036765 0.08838850235733038 4.855146971639846 0.007651431181926235 0.00811935511658801 1.3567354896101388e-09 8.867504814536359 0.14049910407115918 SSLGQS(ph)ASETEEDTVSVSKK ddPTM_A549_MK2206_60min_R1 2 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.999)AS(0.001)ETEEDTVSVSKK;SSLGQS(0.997)AS(0.002)ETEEDTVSVSKK 157.07 3.0686999999999996e-43 8296100.0 1616.7 1975.5 2156.5 1729.7 2746.1 1792.3 1682.9 1486.4 3103.0 2436.8 2674.1 True False 1889.559435479906 2076.044511957273 2462.324127047477 2153.476577649184 2342.152327736672 1981.9599963675487 1988.6611461895582 1697.1017519090883 2400.17545447278 1886.3251875689004 2010.0471685945333 0.9400572608458363 1.0328337286775644 1.2250081319082602 1.0713562404383472 1.165222570062549 0.9860266103871465 0.9893604375364342 0.8443094164281414 1.1940891198842027 0.9384482200424471 1.0 10.97301364133941 -11.411881820815925 2.1959180442730717 0.9991234687847855 1.0779156814839996 0.008846638834274612 0.1123560720801489 0.8806598370945413 7.683630734447414 0.09554954914963697 0.017342463054115763 3.8736303889233365e-12 11.411881820815925 0.0787922126992141 SSLGQS(ph)ASETEEDTVSVSKK ddPTM_A549_PD325901_60min_R1 1 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.446)AS(0.446)ET(0.109)EEDTVSVSKK 267.81 1.4261999999999997e-111 105080000.0 22409.0 19600.0 22421.0 21812.0 27048.0 26155.0 25630.0 24540.0 27126.0 26831.0 24745.0 True False 24683.945183366115 21251.760786205978 23942.623888425736 23159.277701353818 25148.241790534375 25942.002351662628 26605.363675274144 24050.53044874242 25985.988553205996 25136.88608099288 21701.521871479046 1.1374292240677684 0.9792751361892199 1.103269348123093 1.067172977015525 1.1588238806230975 1.1954001431464851 1.225967645625808 1.1082416519530147 1.1974270148932622 1.1583006127339261 1.0 14.40550859823064 -4.884560995766556 20.26144816334149 1.1067230126440282 7.839780131667865 0.0 0.07680913966634847 4285.648776637958 754241.9294467396 0.012331949691245256 3631.0570958604153 1.3044847435747461e-05 4.884560995766556 6.733057119023837 SSLGQSAS(ph)ETEEDTVSVSK ddPTM_A549_MK2206_60min_R1 5 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.2)AS(0.8)ETEEDTVSVSK;SSLGQSAS(0.998)ET(0.001)EEDTVSVSK;SSLGQSAS(0.999)ET(0.001)EEDTVSVSK;SSLGQSAS(0.998)ET(0.002)EEDTVSVSK;SSLGQS(0.001)AS(0.991)ET(0.008)EEDTVSVSK 422.46 0.0 117466000.0 17299.9 16407.4 16206.900000000001 14211.599999999999 20687.499999999996 18793.8 17420.0 17686.5 22430.200000000004 22354.8 21948.000000000004 True False 20219.700178053325 17242.4665783284 18505.28212132889 17693.442637982964 17644.396154565537 20782.547441685212 20584.988511867672 20193.615537634607 17349.795513669145 17304.83515391712 16497.705866015785 1.2256067808618536 1.0451432895192279 1.1216882075373027 1.0724789726328143 1.0695060451351517 1.2597234797655064 1.2477485463158502 1.2240256737291066 1.0516489780199445 1.0489237288175908 1.0 14.009977800030619 -8.920514784387535 5.801743115879252 1.0223310084818173 1.1536818316120845 0.370480267903165 0.0726230811192074 0.1620771414332665 8.84146429840733 0.013695170979205083 0.01444727883583219 1.2008401929443233e-09 8.920514784387535 0.13135082313026714 SSLGQSAS(ph)ETEEDTVSVSK ddPTM_A549_PD325901_60min_R1 2 SSLGQSASETEEDTVSVSK 19 0 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.003)AS(0.997)ETEEDTVSVSK;SSLGQSAS(1)ETEEDTVSVSK 456.77 0.0 80559000.0 11953.5 13323.7 12382.900000000001 13130.7 13812.5 11797.5 12002.1 12836.9 13236.900000000001 14770.5 12851.0 True False 13167.010520298398 14446.53495852921 13223.278058426793 13941.753517016627 12842.357650538155 11701.425071448657 12458.846483301128 12580.857959146771 12680.599125559713 13837.888109250696 11270.40846920094 1.1682815717176864 1.2818111249479367 1.1732740738334846 1.237022913154902 1.1394757950107077 1.0382432103881214 1.1054476434769755 1.116273469016402 1.1251232961265292 1.2278071506517267 1.0 13.460252183064162 -2.000000012337263 0.04034528878655402 0.6085404383234997 2.0363786797414423 0.0 0.08091046646001036 265.0054213985716 0.7916581543726164 7.545937559779449 25.495586354624596 0.00999999971592402 2.000000012337263 1.4278382414179425 SSLGQSAS(ph)ETEEDTVSVSKK ddPTM_A549_MK2206_60min_R1 4 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.001)AS(0.998)ET(0.002)EEDTVSVSKK;SSLGQS(0.001)AS(0.973)ET(0.026)EEDTVSVSKK;SSLGQSAS(0.991)ET(0.009)EEDTVSVSKK;SSLGQS(0.001)AS(0.995)ET(0.004)EEDTVSVSKK 231.07 8.340899999999999e-76 124736000.0 19218.0 21241.999999999996 21732.199999999997 18652.300000000003 28099.9 20863.1 18527.0 15817.4 30195.5 31644.100000000002 32347.0 True False 22461.528565010707 22323.127068082205 24814.152744642306 23222.11433733356 23966.44193371244 23070.819394195052 21893.116082627585 18059.56488875592 23356.26746230514 24495.675832218094 24314.347168216347 0.9237973123281039 0.9181051382396539 1.0205559940790556 0.9550786692595 0.9856913602451688 0.9488562137647343 0.9004196547479675 0.7427534354022606 0.9605961163882859 1.0074576817854595 1.0 14.569520235784884 -8.99048302793798 21.158848118796403 0.982616566151532 0.9255573774404525 0.16274490091289462 0.0667983807939751 13.527889798854007 30080.746278554274 0.012589868568214197 0.012642353968890992 1.0221555052652206e-09 8.99048302793798 -0.05705918871107951 SSLGQSAS(ph)ETEEDTVSVSKK ddPTM_A549_PD325901_60min_R1 1 SSLGQSASETEEDTVSVSKK 20 1 E9PPJ0;Q13435;E9PJ04;H0YCG1 E9PPJ0 SF3B2 Splicing factor 3B subunit 2 1 SSLGQSAS(0.841)ET(0.159)EEDTVSVSKK 292.38 3.793799999999999e-144 107560000.0 15587.0 14114.0 16617.0 15932.0 20506.0 19074.0 17739.0 18825.0 21326.0 18782.0 18988.0 True False 17169.380765457074 15303.436313087313 17744.729546138464 16916.083455802724 19065.72930185957 18918.667667964546 18414.06735215326 18449.520607073195 20429.74238316269 17596.101314643827 16652.596374849225 1.0310332622598335 0.9189819994796982 1.0655833568955475 1.0158225825584442 1.144910311442782 1.1360791579947147 1.1057775579046893 1.1079065505327388 1.2268202461219904 1.0566581281715084 1.0 14.023459510905706 -6.394191403406743 1.663318969515193 1.1133024696998106 0.9849523302928688 0.36452707773093507 0.06336553201287669 0.3969112839344764 2.103268489687056 0.012611030355037998 0.04078297912927332 4.0346753650354235e-07 6.394191403406743 -0.12835013940694184 SSLGS(ph)LQTPEAVTTR ddPTM_A549_MK2206_60min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SSLGS(0.626)LQT(0.373)PEAVTTR 201.57 1.1156999999999999e-38 11351000.0 3358.6 3697.5 2856.3 3092.6 3715.6 2929.3 2751.4 3195.3 5131.9 5220.4 4580.5 True False 3925.4495701136957 3885.6869567005897 3261.3662898612133 3850.2871388320914 3169.0401620255566 3239.2765816880296 3251.2937653015338 3648.2435601958455 3969.532843960316 4041.1080142747373 3443.035434631184 1.140113032421982 1.1285643236828382 0.9472357609385361 1.118282751349183 0.920420431968346 0.9408199953756848 0.944310282897164 1.0596009333800664 1.1529166397863488 1.173705031794893 1.0 11.749465313407157 -5.563616854995874 24.539376273378913 1.0419958397276778 1.1372261624757551 0.1711124809083644 0.0858600466613821 156.20454106503226 94092.42719475146 0.012362376304037198 0.04787947356612124 2.7313864147553584e-06 5.563616854995874 0.0952303227480773 SSLGS(ph)LQTPEAVTTR ddPTM_A549_PD325901_60min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.019)S(0.019)LGS(0.481)LQT(0.481)PEAVTTR 227.86 3.1804e-54 25257000.0 5662.0 4749.0 5502.7 5167.6 6485.5 5523.6 6493.9 5774.2 6633.4 6065.9 6495.3 True False 6236.802071855902 5149.214896616947 5876.1463124231905 5486.790915528889 6029.980853760376 5478.617632943744 6741.02891809843 5659.0290512277315 6354.621266269881 5682.898038787026 5696.419277099131 1.0948635921041188 0.9039388861908274 1.03155087899632 0.9631999767971795 1.058556359782405 0.9617651662280201 1.1833800480942231 0.9934361878835505 1.1155466192274273 0.9976263618153137 1.0 12.475839622456938 SSLGSLQT(ph)PEAVTTR ddPTM_A549_MK2206_60min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SSLGSLQT(1)PEAVTTR 147.83 9.918e-14 15460000.0 2863.2 2835.6 3140.6 2672.2 3987.8 2581.3 2539.0 2722.0 4524.5 4194.3 4882.3 True False 3346.4381614808344 2979.9199281731417 3585.9843048482753 3326.889119959615 3401.1999026067156 2854.4514526717358 3000.303434651667 3107.8518357753856 3499.7079741418283 3246.8047169321376 3669.890165374926 0.9118633012655716 0.8119915839139848 0.9771366834576428 0.9065364275335829 0.9267852031912894 0.777802965223107 0.8175458390987426 0.846851457598835 0.9536274429031281 0.8847144112282813 1.0 11.841521170553436 -8.916827565802167 3.617277985706342 0.9807860033717846 0.8717102963412172 0.1703619711471237 0.062385471991755474 0.16314712570078005 3.9839775201774743 0.010452221146153955 0.01089779739026413 1.211078890210901e-09 8.916827565802167 -0.10907570703056735 SSLGSLQT(ph)PEAVTTR ddPTM_A549_PD325901_60min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SS(0.001)LGS(0.002)LQT(0.997)PEAVTTR 225.7 4.442699999999999e-54 22434000.0 4603.6 4992.2 4946.1 4223.8 5357.0 4722.1 5585.7 5030.1 5637.0 5406.0 6012.4 True False 5070.954083008801 5412.910214127427 5281.772089315491 4484.694533054206 4980.742800646727 4683.644783207266 5798.266870112322 4929.77070946289 5400.096493195544 5064.664237406265 5272.912915743813 0.9616988112714691 1.0265502769760546 1.0016801289369348 0.8505155698027645 0.9445903773178717 0.8882461853718244 1.0996325869141348 0.934923596925644 1.0241201740829036 0.960505951517659 1.0 12.364384454893582 -7.743750950151817 24.99898949273426 1.010744454289492 0.947417310963879 0.1884869255976528 0.05937384786665518 283.0501709568999 400032.83812630177 0.008582912049168317 0.012715820794191455 1.8040519931727578e-08 7.743750950151817 -0.06332714332561284 SSLPPNS(ph)PKPVR ddPTM_A549_MK2206_60min_R1 1 SSLPPNSPKPVR 12 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.001)S(0.001)LPPNS(0.999)PKPVR 54.898 0.0054713 3481000.0 1356.4 1202.5 1615.6 1563.9 1609.9 1350.6 1288.3 1549.6 1588.1 1949.7 1888.2 True False 1585.3271592038989 1263.7021137072234 1844.7163735951315 1947.0555702061392 1373.0858426216344 1493.5195955442791 1522.3674339746924 1769.2605454509694 1228.3978856745805 1509.2614158745412 1419.307828331101 1.1169720391579974 0.8903650698475698 1.2997295842187024 1.371834588198948 0.9674334314326886 1.0522872950686395 1.0726125817010215 1.2465657626445714 0.8654908126019407 1.0633784903795058 1.0 10.470971808692964 -8.771355362019893 24.994087172371465 0.9364817699728194 1.1235887916792058 0.16967425984100382 0.14124642819425226 198.9865125801253 501560.878780691 0.024500715916534355 0.026233557908638395 1.6929519734117587e-09 8.771355362019893 0.18710702170638638 SSLPPNS(ph)PKPVR ddPTM_A549_PD325901_60min_R1 2 SSLPPNSPKPVR 12 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.003)S(0.004)LPPNS(0.993)PKPVR;S(0.009)S(0.009)LPPNS(0.981)PKPVR 53.981 0.006013 23120000.0 8068.3 8852.8 8060.8 9263.2 9858.5 9345.4 8945.2 9524.599999999999 10457.4 9981.5 9566.9 True False 8887.387876431467 9598.856524904297 8607.854361528129 9835.36682574641 9166.072969978672 9269.294160857491 9285.614481001265 9334.624381095842 10017.911844588089 9351.266386546557 8390.231949575795 1.0592541338360506 1.1440513900679004 1.0259375918639932 1.1722401579426753 1.0924695556768371 1.1047720988602874 1.106717256067127 1.1125585606209367 1.19399700804393 1.114542058282352 1.0 13.034494979460344 -11.06791791970438 1.3995423529764046 1.0003689234180424 1.121737500866558 0.0 0.05610332125481316 0.30016678950678183 1.054516304504826 0.03375388042361427 0.007564026280060728 8.552283330852646e-12 11.06791791970438 0.12136857744851559 SSLS(ph)GDEEDELFK ddPTM_A549_MK2206_60min_R1 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 SS(0.001)LS(0.999)GDEEDELFK;S(0.003)SLS(0.996)GDEEDELFK 314.18 1.1164999999999997e-135 53825000.0 15691.7 16649.3 14948.3 16378.2 23158.0 20169.4 18528.7 20421.7 26486.0 26909.0 25382.0 True False 18340.07533476838 17496.678255089962 17068.193715902522 20390.85973524534 19751.488877217107 22303.712520635836 21895.12495062242 23316.53851383329 20486.96328945086 20830.238210887852 19078.948892437238 0.9612728373122408 0.9170672008050467 0.8946087026140227 1.0687622179924248 1.0352503688002677 1.1690220801145326 1.147606457465877 1.222108127931293 1.073799369396694 1.0917917086692766 1.0 14.219694071362508 -6.26865577567932 24.10763331949104 1.0684039940507586 0.9235913401700144 0.5505097868828811 0.06652336491058376 255.6417975254654 854018.8017362694 0.011279923915864964 0.026748062517815557 5.386965873838541e-07 6.26865577567932 -0.14481265388074416 SSLS(ph)GDEEDELFK ddPTM_A549_PD325901_60min_R1 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 SSLS(1)GDEEDELFK;S(0.009)S(0.001)LS(0.989)GDEEDELFK 301.59 3.229999999999998e-117 85826000.0 27175.5 27480.4 26203.8 25300.9 32213.2 26407.0 24334.1 22645.7 24477.9 24645.8 23749.3 True False 29934.336754454245 29796.269750472202 27982.147444250062 26863.67913048702 29950.655961507015 26191.95014721294 25260.147491630443 22194.01374829202 23449.178987190193 23089.659981921464 20828.2866592167 1.4371963111621586 1.4305674892028188 1.3434685196186176 1.2897690323749988 1.437979822898855 1.2575182287316355 1.2127808640684616 1.0655707841658197 1.125833313649624 1.108572220063242 1.0 14.346256547304616 -7.779774814325005 0.43435594533449223 1.0192545902290375 1.4502298163287488 0.8449952725283807 0.05893959726651409 0.25859196429145503 0.10395952427621225 0.01936999015351971 0.04169389624201251 1.6604476416114174e-08 7.779774814325005 0.4309752260997113 SSLS(ph)GDEEDELFKGATLK ddPTM_A549_PD325901_60min_R1 1 SSLSGDEEDELFKGATLK 18 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.001)S(0.003)LS(0.996)GDEEDELFKGATLK 172.61 6.4199e-31 7935600.0 2715.4 3192.6 3488.0 3487.7 3893.6 4902.9 3731.2 4066.6 4287.5 3929.6 3600.2 True False 2991.0654090281737 3461.6516064306743 3724.716655047903 3703.127307858598 3620.126968190794 4862.972407951315 3873.1928577909816 3985.488472814016 4107.311285182876 3681.4843853702682 3157.398223548145 0.9473196591803191 1.0963620555093057 1.179679087442518 1.1728413857461373 1.1465538116768352 1.540183424340602 1.2267039453257367 1.2622698154100118 1.300853105747067 1.165986715870505 1.0 11.624520515191506 -5.281431784673896 1.6231993068652883 1.1901443324365948 0.8632543625965491 0.272703540224396 0.12801943206732405 1.3508075644241877 3.433923808381779 0.022358578916268974 0.6838980460999214 5.230801207577461e-06 5.281431784673896 -0.3268899698400457 SSLS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 SSLSPGR 7 0 F8W1J5;F8VVA2;Q9BUQ8 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 SSLS(1)PGR;SSLS(1)PGR 137.62 0.005510800000000001 947470000.0 7124.4 7667.599999999999 7128.3 6387.799999999999 8225.0 6983.099999999999 6365.799999999999 7533.1 9667.2 10600.5 10552.4 True False 8326.824545143214 8057.848089032443 8139.200127443787 7952.811286759242 7015.1133955916175 7722.047006993372 7522.383459750126 8600.939994151204 7477.594635346199 8205.839687633012 7931.947848575952 1.0497830676784083 1.015872550205823 1.0261287999901618 1.002630304507995 0.884412445658107 0.973537289252316 0.9483652191561804 1.0843414705122347 0.9427185828873894 1.0345302117822461 1.0 12.953459476746222 -6.526599188001544 24.99634182018018 0.97285538125124 1.0266654213325122 0.14722999437999318 0.0494989212544794 127.07785554322695 853794.5612704817 0.006618036682094146 0.013827304166192076 2.9744098593607895e-07 6.526599188001544 0.053810040081272104 SSLS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 SSLSPGR 7 0 F8W1J5;F8VVA2;Q9BUQ8 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 SSLS(1)PGR;SSLS(1)PGR 151.5 0.0027634 1176000000.0 9547.2 9465.2 9257.1 9717.2 10396.3 10259.2 10207.9 9763.9 10507.900000000001 10712.3 11547.0 True False 10516.424715722833 10262.86562212229 9885.342473464432 10317.409374637604 9666.099753287952 10175.65247662692 10596.367220477217 9569.151354868625 10066.289505206576 10035.923549827445 10126.792202463883 1.0384754130892655 1.0134369716429354 0.9761573335196209 1.0188230555503393 0.9545075637017769 1.0048248520544492 1.046369571787904 0.9449341078155448 0.9940254824975487 0.9910269065643186 1.0 13.30588963300827 -5.453024829554824 3.742286718759485 0.9949404798167737 1.03677640919899 0.20814918385502934 0.026759831751734537 0.27615534680224163 6.980299394280287 0.003321183632146615 0.022866841407638214 3.523507258135593e-06 5.453024829554824 0.04183592938221625 SSLS(ph)RER ddPTM_A549_MK2206_60min_R1 8 SSLSRER 7 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;H7C044 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 SSLS(1)RER;SSLS(1)RER;SSLS(1)RER;S(0.001)S(0.003)LS(0.996)RER;SSLS(1)RER;S(0.001)S(0.003)LS(0.996)RER;SSLS(1)RER;S(0.013)S(0.043)LS(0.944)RER 95.50200000000001 0.0033146 4693510000.0 29438.260000000002 34082.7 31177.51 29406.699999999997 23674.399999999998 20385.31 21016.4 21099.52 25425.100000000006 50209.5 50925.600000000006 True False 34406.7185916439 35817.36385101805 35598.94973070434 36611.342820116915 20191.927121288045 22542.46997352639 24834.807839312056 24090.441574569984 19666.355445541696 38867.13907798781 38279.36804494135 0.8988319386895096 0.9356832591637141 0.9299774669453764 0.9564249539630301 0.5274885180335788 0.5888934725113727 0.6487778954489296 0.6293322697043207 0.5137586237696685 1.0153547736826898 1.0 15.22427939208094 -6.726103064388841 24.99323968312641 0.7172717772087762 0.9306011567819081 0.31895058713272817 0.15863974040864384 223.4996407082965 158079.39534098955 0.02802796056179394 0.058343054361922574 1.878870880540549e-07 6.726103064388841 0.21332937957313192 SSLS(ph)RER ddPTM_A549_PD325901_60min_R1 9 SSLSRER 7 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;H7C044 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 SSLS(1)RER;SS(0.004)LS(0.996)RER;SSLS(1)RER;SS(0.001)LS(0.999)RER;SSLS(1)RER;SSLS(1)RER;SS(0.002)LS(0.998)RER;SS(0.005)LS(0.995)RER;S(0.004)S(0.017)LS(0.979)RER 106.42 0.0026579 6243001000.0 32104.0 34205.4 33339.899999999994 33761.4 38861.9 35743.799999999996 36450.7 37242.1 35396.1 39205.50000000001 38465.0 True False 35363.17444628431 37088.009101861746 35602.54610310537 35846.7650002974 36132.374210276845 35452.714343619096 37837.85133508837 36499.27709963773 33908.52501025345 36730.05803914753 33734.04884972486 1.048293212706744 1.0994235903041991 1.0553890599288602 1.0626285969995497 1.0710950936021884 1.0509475011893883 1.1216516435262405 1.0819714307710628 1.0051721084921004 1.0888126178618227 1.0 15.041917864370472 -8.766432309334572 24.762053632396064 1.0024423769352138 1.0745111980752629 0.10694574937537638 0.03321129624360424 39.17724081061174 194295.93841907565 0.003430401337433399 0.0037078453104763876 1.7122520335298887e-09 8.766432309334572 0.07206882114004909 SSLS(ph)RERGEK ddPTM_A549_PD325901_60min_R1 2 SSLSRERGEK 10 2 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;H7C044 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.019)S(0.018)LS(0.963)RERGEK;S(0.001)S(0.004)LS(0.994)RERGEK 68.033 0.0018390999999999998 98484000.0 11498.0 13423.0 15816.0 16582.0 15925.0 25503.0 20266.0 21888.0 19537.0 17155.0 21798.0 True False 12665.268495619775 14554.20331802259 16889.368869334172 17606.23247954562 14806.482938267522 25295.312023492686 21037.233719980708 21451.426669196167 18715.927831747602 16071.830372309385 19116.984188906874 0.6625139389386075 0.7613231864505094 0.8834745429739209 0.9209733243260249 0.7745198087708504 1.3231852772139105 1.1004473044544394 1.1221135330353997 0.9790209400606192 0.8407095080214316 1.0 14.222567327612916 -5.921004012000484 0.9099524266569635 1.0223101577590006 0.6353166434501332 0.4508970303675788 0.13415008865347675 0.6640923803406992 0.7216295876513911 0.019586594952781696 0.20197336977335897 1.1994882222589758e-06 5.921004012000484 -0.3869935143088674 SSLSNNECGSLDKT(ph)SPEMSNSNNDER ddPTM_A549_MK2206_60min_R1 1 SSLSNNECGSLDKTSPEMSNSNNDER 26 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SSLSNNECGS(0.001)LDKT(0.549)S(0.45)PEMSNSNNDER 112.8 1.7937e-13 18462000.0 1105.4 1569.4 1357.6 1604.2 1711.4 1048.1 1178.9 1337.4 1814.8 2030.4 2170.8 True False 1291.9644955647236 1649.2757565506165 1550.128094078207 1997.2290720152755 1459.6553270778709 1159.0092463275264 1393.090870071229 1526.9805456157242 1403.7506976400905 1571.7312298259583 1631.7304489678806 0.7917756859792195 1.010752577175865 0.9499902971466336 1.2239944859021195 0.8945443948791588 0.7102945508313797 0.8537506123958166 0.9358044072668902 0.8602834484874666 0.9632296993784275 1.0 10.67218703801578 -5.23848588673813 22.708284475648277 0.9342324151904674 0.7917751340884683 0.11020357423557059 0.12019055946086742 3253.92809023864 3218989.650915974 0.016991372168230604 1.064735631228791 5.77449637782103e-06 5.23848588673813 -0.14245728110199907 SSLSNNECGSLDKTS(ph)PEMSNSNNDER ddPTM_A549_MK2206_60min_R1 3 SSLSNNECGSLDKTSPEMSNSNNDER 26 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SSLSNNECGSLDKT(0.045)S(0.943)PEMS(0.011)NS(0.001)NNDER;SSLSNNECGS(0.001)LDKT(0.456)S(0.538)PEMS(0.005)NSNNDER;SSLSNNECGS(0.001)LDKT(0.139)S(0.855)PEMS(0.004)NS(0.001)NNDER 142.55 8.384e-33 43784000.0 4190.6 4155.6 4338.4 4032.5 5094.8 5169.400000000001 4473.1 4228.799999999999 6353.7 6601.7 6370.799999999999 True False 4897.870829666663 4367.1022899972895 4953.650356031889 5020.462681025801 4345.36166904075 5716.422476829996 5285.8043692557585 4828.2453501568525 4914.5970947739925 5110.371384920224 4788.754534864829 1.0227859444470175 0.9119494971400864 1.034433968157383 1.04838588916471 0.9074095649305202 1.193717998116467 1.1037952208182997 1.008246573300951 1.0262787660116965 1.067160855231531 1.0 12.22543477151827 -4.8620864890569315 19.050528441786696 1.0201145421875988 2.155908012170877 0.0 0.07707364630147048 34390.77058308187 3210990.6072649634 0.009736809045095624 553977.16388479 1.3737683639790303e-05 4.8620864890569315 1.1357934699832781 SSLSNNECGSLDKTS(ph)PEMSNSNNDER ddPTM_A549_PD325901_60min_R1 4 SSLSNNECGSLDKTSPEMSNSNNDER 26 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SSLSNNECGSLDKT(0.091)S(0.909)PEMSNSNNDER;SSLSNNECGSLDKT(0.036)S(0.869)PEMS(0.089)NS(0.006)NNDER;SSLSNNECGSLDKT(0.059)S(0.939)PEMS(0.002)NSNNDER;SSLSNNECGSLDKT(0.038)S(0.96)PEMS(0.002)NS(0.001)NNDER 171.93 1.1733e-48 96130000.0 12283.2 12352.6 12925.900000000001 12452.6 13395.2 13269.8 11830.7 13496.4 11611.7 14193.400000000001 14712.8 True False 13530.181421586092 13393.596953453467 13803.129303751046 13221.768820093459 12454.367362931307 13161.735148388167 12280.923762507442 13227.203714279016 11123.700629774468 13297.226301739209 12903.218872123542 1.048589623695918 1.0380043217269879 1.0697430959317984 1.0246876342350606 0.965213989343237 1.0200350221775383 0.9517721030865777 1.025108838760801 0.8620872621022037 1.0305355922053598 1.0 13.655443388730372 -7.22502022952516 0.7933336277950839 0.9401186717065896 1.0523793672805297 0.1536211176743374 0.05090840084978807 0.5112312650780577 0.6257301768943636 0.010410355065846234 0.027742026035639394 5.9563439811160076e-08 7.22502022952516 0.11226069557394014 SSLSTSS(ph)PESAR ddPTM_A549_MK2206_60min_R1 2 SSLSTSSPESAR 12 0 D6REJ6;D6R9F1;D6REQ4;D6RDH3;D6RBZ2;D6RF08;D6RF67;D6RF51;D6RB63;D6R9D1;D6RC23;D6RAM4;D6RGK2;D6R9N9;D6RC13;Q8N7B6-2;Q8N7B6-3;Q8N7B6-4;Q8N7B6 D6REJ6 PACRGL PACRG-like protein 1 SSLSTS(0.016)S(0.983)PESAR;SSLST(0.001)S(0.026)S(0.973)PESAR 180.24 7.251300000000001e-17 50039000.0 4366.299999999999 4578.299999999999 3697.2 4633.6 6233.9 4547.299999999999 4263.5 5054.4 7080.4 6397.9 7467.1 True False 5103.224694214083 4811.315914499613 4221.518554379749 5768.832208010212 5316.901567997393 5028.492267746556 5038.122762362104 5770.876678450816 5476.700705075431 4952.609946465474 5612.812988524076 0.9092098212871346 0.8572022485582187 0.7521217191827058 1.0277969744948088 0.9472793016386433 0.895895209412425 0.8976110147733445 1.028161225084448 0.9757497205542142 0.8823757279267189 1.0 12.454508276079604 -6.885309683142411 0.41730086145489304 0.9960868996706354 0.834287666765317 0.14606106744513914 0.07268429613300988 1.4160816533307634 0.37641413762406134 0.018521618064553668 0.09352115966601067 1.3022378582212454e-07 6.885309683142411 -0.1617992329053184 SSLSTSS(ph)PESAR ddPTM_A549_PD325901_60min_R1 2 SSLSTSSPESAR 12 0 D6REJ6;D6R9F1;D6REQ4;D6RDH3;D6RBZ2;D6RF08;D6RF67;D6RF51;D6RB63;D6R9D1;D6RC23;D6RAM4;D6RGK2;D6R9N9;D6RC13;Q8N7B6-2;Q8N7B6-3;Q8N7B6-4;Q8N7B6 D6REJ6 PACRGL PACRG-like protein 1 SSLSTS(0.032)S(0.967)PESAR;SSLS(0.001)T(0.002)S(0.022)S(0.975)PESAR 176.97 4.3857e-16 48284000.0 7245.9 8038.3 7236.7 8002.2 8594.9 7886.599999999999 7796.7 8237.3 8067.099999999999 7979.8 8369.0 True False 7981.49843385035 8715.715751416301 7727.825979812253 8496.4777196852 7991.223874795324 7822.374144393894 8093.407685017944 8073.000589463162 7728.067841095926 7475.954066158808 7339.666055462045 1.0874470818615332 1.1874812403665458 1.0528852295754445 1.157610939718746 1.0887721341011696 1.0657670369856442 1.1026942675402756 1.0999138827924444 1.0529181822032407 1.0185686936799174 1.0 12.841498708617655 -9.214462605475477 0.30198859135266803 0.9825049098516347 1.1311780191206002 0.5223240915447425 0.03630912485105879 0.7422807166300963 0.19149075653125863 0.04100956936568637 0.02501290348868702 6.102916029761916e-10 9.214462605475477 0.1486731092689655 SSLSVQPGFLADLNRT(ph)LQR ddPTM_A549_MK2206_60min_R1 1 SSLSVQPGFLADLNRTLQR 19 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 SSLSVQPGFLADLNRT(1)LQR 53.96 0.0043947 4064400.0 1742.6 1408.9 1675.7 1306.0 1921.0 1766.4 1615.9 1246.2 2489.3 1830.0 2333.2 True False 2036.7082775204315 1480.6069921015453 1913.3394573120588 1625.9700586285687 1638.4234447333122 1953.3192755585762 1909.4881134516068 1422.852666327438 1925.4775245952596 1416.601729009802 1753.8020469558955 1.1613102408311025 0.844226972292261 1.0909666006109842 0.9271115069404743 0.9342123004002373 1.1137626843057837 1.0887706037097733 0.8112960460943172 1.0978876025018582 0.8077318255322042 1.0 10.776270203487147 -7.240160815952141 24.73933504935055 1.0354902475109409 0.9853215639682955 0.0 0.12943810146004403 1979.56362851618 2301524.3312378437 0.015334019206173503 0.026538366734864552 5.7522689573986e-08 7.240160815952141 -0.050168683542645365 SSLSVQPGFLADLNRT(ph)LQR ddPTM_A549_PD325901_60min_R1 2 SSLSVQPGFLADLNRTLQR 19 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 SSLSVQPGFLADLNRT(1)LQR;SSLSVQPGFLADLNRT(1)LQR 120.64 1.4261e-14 12834900.0 2849.1000000000004 2613.5 3037.8 3356.8 3085.9 3116.7 2979.7 3760.1000000000004 3508.9 3523.3999999999996 3799.7 True False 3138.3385346034347 2833.7488170790493 3243.9633757753763 3564.141912154066 2869.1570297770627 3091.318628538592 3093.094114054403 3685.101855758613 3361.4331355284444 3300.931922692794 3332.3609882828455 0.9417762798323389 0.8503727018300231 0.9734729782222603 1.069554566472901 0.860998265153599 0.9276661920506811 0.9281989931253708 1.1058531379751668 1.0087241890502925 0.9905685291297788 1.0 11.702328978221503 SSLVNESETNQNS(ph)SSDSEAER ddPTM_A549_MK2206_60min_R1 1 SSLVNESETNQNSSSDSEAER 21 0 Q9NQB0-13;E2GH26;A0A0D9SGH8;Q9NQB0-7;C6ZRK5;Q5VVR7;C6ZRJ7;Q9NQB0;Q9NQB0-5;Q9NQB0-8;Q9NQB0-16;A0A0A0MTL7;Q9NQB0-2;Q9NQB0-14;Q9NQB0-11;Q9NQB0-6;Q9NQB0-4;Q9NQB0-9;Q9NQB0-12;Q9NQB0-10;Q9NQB0-15;Q9NQB0-3 Q9NQB0-13 TCF7L2 Transcription factor 7-like 2 1 SSLVNESETNQNS(0.467)S(0.315)S(0.217)DSEAER 131.71 1.5964999999999998e-17 2355000.0 485.9 400.84 512.81 392.99 826.94 337.11 382.04 426.21 718.69 871.85 442.69 True False 567.908040885561 421.2410438739321 585.5341690661797 489.27256764199154 705.2982214407938 372.7827564444926 451.45172279414055 486.6265727133828 555.9078625120985 674.8984794738777 332.7578553775524 1.70667057654042 1.26590863916942 1.7596404099967025 1.4703561756246297 2.119553934017729 1.1202823627455083 1.356697416750436 1.462404462732363 1.6706077813891322 2.028196986388577 1.0 8.378328913854704 -7.310979872065289 24.999693443729097 1.3272540810962778 1.6367961445899635 0.046272599048684304 0.32981626710044415 472.0099556332076 238190.1739445664 0.045692800629169444 0.07304505292697812 4.886750070878994e-08 7.310979872065289 0.3095420634936856 SSLVNESETNQNSS(ph)SDSEAER ddPTM_A549_MK2206_60min_R1 1 SSLVNESETNQNSSSDSEAER 21 0 Q9NQB0-13;E2GH26;A0A0D9SGH8;Q9NQB0-7;C6ZRK5;Q5VVR7;C6ZRJ7;Q9NQB0;Q9NQB0-5;Q9NQB0-8;Q9NQB0-16;A0A0A0MTL7;Q9NQB0-2;Q9NQB0-14;Q9NQB0-11;Q9NQB0-6;Q9NQB0-4;Q9NQB0-9;Q9NQB0-12;Q9NQB0-10;Q9NQB0-15;Q9NQB0-3 Q9NQB0-13 TCF7L2 Transcription factor 7-like 2 1 SSLVNESETNQNS(0.097)S(0.544)S(0.356)DS(0.003)EAER 150.29 5.0271e-22 2512300.0 547.72 654.84 373.8 531.66 780.26 559.47 570.49 451.21 980.42 695.75 502.43 True False 640.1617455316718 688.1685589522151 426.81046078847476 661.9167238671246 665.4847876041721 618.6727440538702 674.1406484578299 515.170399272672 758.3564354090244 538.5795917806391 377.66276463742986 1.6950618527252763 1.8221774116727716 1.1301364623494945 1.7526660974972976 1.7621138484305223 1.6381618787539693 1.7850333990565095 1.3641016470534353 2.0080254301402323 1.4260860275640235 1.0 8.56095473918415 -10.993547361649567 1.2505167183047794 0.9974880915186443 1.6875945179622043 0.2655877624383437 0.2548207174314373 0.28348876715228816 0.7841494583347797 0.1674321255081397 0.03768729708377001 1.0149686739115961e-11 10.993547361649567 0.69010642644356 SSLVNESETNQNSSS(ph)DSEAER ddPTM_A549_PD325901_60min_R1 2 SSLVNESETNQNSSSDSEAER 21 0 Q9NQB0-13;E2GH26;A0A0D9SGH8;Q9NQB0-7;C6ZRK5;Q5VVR7;C6ZRJ7;Q9NQB0;Q9NQB0-5;Q9NQB0-8;Q9NQB0-16;A0A0A0MTL7;Q9NQB0-2;Q9NQB0-14;Q9NQB0-11;Q9NQB0-6;Q9NQB0-4;Q9NQB0-9;Q9NQB0-12;Q9NQB0-10;Q9NQB0-15;Q9NQB0-3 Q9NQB0-13 TCF7L2 Transcription factor 7-like 2 1 SSLVNESET(0.001)NQNS(0.023)S(0.155)S(0.817)DS(0.004)EAER;SSLVNESETNQNS(0.135)S(0.135)S(0.729)DS(0.002)EAER 171.35 4.4783e-35 7328900.0 1151.41 1753.77 1148.25 1610.27 1951.17 1585.9099999999999 1888.33 1768.1799999999998 1676.6799999999998 1266.0 1354.42 True False 1268.3002955767586 1901.5663527563509 1226.1771499881747 1709.7327207114895 1814.1265503710797 1572.9948747667852 1960.1914314838243 1732.9122627896243 1606.2149704117605 1186.0645439430887 1187.8349263757789 1.067741204955548 1.6008675199998106 1.0322790842069127 1.439368958385557 1.5272547641835963 1.3242537661071927 1.6502220872260374 1.4588830689437118 1.3522206956083598 0.9985095720008067 1.0 10.214118643152437 -10.311358727757597 0.8197747992323283 1.0114102842460042 1.3924025521528127 0.38386754189976213 0.18593632142330818 0.45874945785716875 0.585445814210052 0.09775908522979967 0.03423533332996753 4.882488985664239e-11 10.311358727757597 0.3809922679068085 SSLYFPRS(ph)PSANEK ddPTM_A549_PD325901_60min_R1 2 SSLYFPRSPSANEK 14 1 B8ZZW8;E7ENZ2;E9PG19;O94868-2;O94868 B8ZZW8 FCHSD2 F-BAR and double SH3 domains protein 2 1 S(0.001)S(0.001)LY(0.023)FPRS(0.82)PS(0.155)ANEK;SSLY(0.013)FPRS(0.903)PS(0.083)ANEK 58.071000000000005 0.0030228 12514400.0 4583.9 4652.7 5134.1 4877.7 5555.200000000001 6438.700000000001 5724.5 5527.0 5929.1 5167.2 6292.7 True False 5049.254153511171 5044.799357652072 5482.530899851329 5178.9844509395525 5165.021916399605 6386.26536194418 5942.348980066599 5416.759649152379 5679.920546000652 4840.942110160132 5518.73779271191 0.9149291637263973 0.9141219509131736 0.9934392800998091 0.9384364043856118 0.9359063812056039 1.1571967362497153 1.0767587088326818 0.9815214733169234 1.0292064525155737 0.8771828436120157 1.0 12.430122626227092 SSNAIADKVKS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SSNAIADKVKSPK 13 2 Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3;F8VVB8 Q9Y4F3-3 KIAA0430 Meiosis arrest female protein 1 1 S(0.005)S(0.004)NAIADKVKS(0.991)PK 49.224 0.006331600000000001 9792400.0 4288.4 3722.7 4085.9 4549.6 5225.2 4684.0 4679.5 5570.4 5387.4 4947.3 5247.5 True False 4723.755211046775 4036.424993816788 4363.193744512678 4830.618459108722 4858.199977961411 4645.855056975252 4857.5809332206545 5459.2940021057375 5160.986313188157 4634.926633688502 4602.090766643213 1.0264367763637796 0.8770850464474814 0.9480894588472474 1.0496573631537038 1.0556506214902417 1.0095096538836763 1.0555161076850723 1.1862638698210146 1.1214438338756636 1.0071349890104926 1.0 12.168073722655791 -6.284384850056516 4.23266575909384 1.064103018356527 0.9418584448948499 0.3968403860817129 0.06034856308404943 0.16522751941982466 7.119707197191522 0.009444975351486121 0.024050499288970663 5.195354061857479e-07 6.284384850056516 -0.12224457346167705 SSPAAKPGS(ph)TPSRPSSAK ddPTM_A549_MK2206_60min_R1 1 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 S(0.001)S(0.001)PAAKPGS(0.344)T(0.344)PS(0.297)RPS(0.006)S(0.006)AK 45.047 0.008575900000000001 24045000.0 786.25 789.12 681.71 864.79 1318.4 805.32 537.83 746.34 1110.0 1019.9 1028.5 True False 918.9497780330772 829.282837395962 778.3867287964455 1076.6635888218977 1124.4651064739198 890.5384278718485 635.5467492157176 852.1359805703906 858.5867723057643 789.5038816486872 773.0950648440506 1.1886633608487056 1.0726789952581648 1.0068447778197398 1.3926664879681818 1.4544978458771405 1.1519132230542548 0.8220809808738342 1.102239581289119 1.1105836931955568 1.0212248370877217 1.0 9.594502018085679 -7.531201163592647 24.9983775925215 1.0399935171588524 1.2212327997155241 0.3407110340372429 0.13856028553972138 203.6238116134133 611631.105582172 0.022417839273566723 0.033281209039660586 2.9430581044379735e-08 7.531201163592647 0.18123928255667177 SSPAAKPGS(ph)TPSRPSSAK ddPTM_A549_PD325901_60min_R1 2 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 SSPAAKPGS(0.495)T(0.495)PS(0.01)RPSSAK;SSPAAKPGS(0.582)T(0.416)PS(0.002)RPSSAK 114.72 1.1847e-10 97299000.0 4498.0 4637.5 4764.9 4436.8 6067.7 5244.7 5472.6 5679.4 5966.3 5666.1 5799.9 True False 4954.63364874741 5028.318400307665 5088.27476767137 4710.8510592961065 5641.5256844286205 5201.9889020747405 5680.862787721627 5566.119911596891 5715.557159367137 5308.341479017325 5086.5490685953255 0.9740658316534545 0.9885520285949505 1.0003392671638025 0.9261389196815574 1.1091067064033169 1.0226951184236377 1.1168402606780365 1.0942821619400993 1.1236610681012293 1.0436037099870636 1.0 12.312471487111708 -6.764205978847547 24.999278714707565 1.0670863367768744 0.9754413881542179 0.5803994417012079 0.04093065661897436 55.27249630835535 499456.338068698 0.007551680383663292 0.014739310621864865 1.7210521142065002e-07 6.764205978847547 -0.09164494862265649 SSPAAKPGSTPSRPS(ph)SAK ddPTM_A549_MK2206_60min_R1 1 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 SSPAAKPGS(0.014)T(0.014)PS(0.068)RPS(0.452)S(0.452)AK 41.912 0.026951999999999997 4623700.0 569.4 594.7 828.14 430.19 736.76 725.83 793.61 670.91 994.29 1090.6 1154.4 True False 665.5007995065614 624.967689830924 945.582704647854 535.5865693119631 628.3835799800701 802.6368488330402 937.7986643457699 766.0135470757034 769.0849025548629 844.2327025454047 867.7306201808192 0.7669440077703875 0.720232380068243 1.0897191854896302 0.617226771599182 0.7241689590821705 0.9249838949624543 1.0807486131471882 0.88277805261278 0.8863175790599618 0.972920262246228 1.0 9.761103429164582 -7.284998651315643 22.609358776169564 0.9496411791899735 0.7878918369288045 0.34169126215633505 0.12009811488557434 221.54150506737457 212608.43914797 0.017740714511496992 0.028376629472714986 5.188016500444887e-08 7.284998651315643 -0.161749342261169 SSPAAKPGSTPSRPS(ph)SAKR ddPTM_A549_PD325901_60min_R1 3 SSPAAKPGSTPSRPSSAKR 19 3 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 SSPAAKPGS(0.011)T(0.011)PS(0.059)RPS(0.46)S(0.46)AKR;SSPAAKPGSTPS(0.009)RPS(0.495)S(0.495)AKR;SSPAAKPGSTPS(0.002)RPS(0.499)S(0.499)AKR 98.74 1.3742e-07 251351000.0 6866.2 5853.200000000001 7298.400000000001 6066.4 7526.3 7518.5 6373.4 7527.000000000001 7306.999999999999 7414.9 8122.200000000001 True False 7563.251569370717 6346.469705807184 7793.713312844501 6441.1077502059825 6997.678652325453 7457.2718287507305 6615.9432246583 7376.868080182729 6999.912200776974 6946.721948565251 7123.220890867938 1.061774116687425 0.8909550613463976 1.0941277032186583 0.9042409113640666 0.9823756359004069 1.0468960520810258 0.9287853523032011 1.0356084969427202 0.98268919468031 0.9752220315771816 1.0 12.79831401357367 -11.091254354140384 1.3341131830176418 1.0001646775048008 0.9892090067496487 0.0 0.062492966257402756 4.161539823789008 12.888305593354188 0.042136542334433605 0.0086215697818409 8.104862396844423e-12 11.091254354140384 -0.010955670755152025 SSPAAKPGSTPSRPSS(ph)AK ddPTM_A549_MK2206_60min_R1 1 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 SSPAAKPGS(0.03)T(0.03)PS(0.03)RPS(0.193)S(0.717)AK 41.136 0.030233 4447300.0 1247.8 1138.5 1266.4 1055.8 1594.2 1417.2 1242.0 1476.5 1874.9 1818.1 2022.0 True False 1458.3981342189813 1196.4447870733259 1445.9945627140844 1314.4710473966632 1359.6952918239706 1567.1671633387766 1467.6553232915999 1685.7983965916094 1450.2381436000687 1407.3899472747114 1519.8815956389606 0.9595472031529327 0.7871960490253443 0.9513863230287923 0.8648509536323831 0.8946060638706218 1.0311113496179531 0.9656379335750791 1.1091642937375639 0.954178370052824 0.925986571133551 1.0 10.56974322146376 -7.207718939126194 8.377069339798833 0.9909750203250925 0.8873297237739685 0.42104811577804024 0.06162916781706125 0.26162582485402336 38.33912006995441 0.00814894719564312 0.014120163581425968 6.198420863843272e-08 7.207718939126194 -0.10364529655112409 SSPAAKPGSTPSRPSS(ph)AK ddPTM_A549_PD325901_60min_R1 1 SSPAAKPGSTPSRPSSAK 18 2 Q15555-2;Q15555;K7EL66;K7ERD8;Q15555-4;Q15555-5;Q15555-3 Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 SSPAAKPGS(0.003)T(0.006)PS(0.034)RPS(0.028)S(0.929)AK 69.922 0.00026657 45132000.0 1941.2 1851.0 2078.4 2038.9 1878.0 2249.3 1890.2 2102.3 1823.0 2316.1 2124.4 True False 2138.2691949640903 2006.9902660850644 2219.4527224345065 2164.838222322131 1746.0957587482824 2230.982446553039 1962.132595357127 2060.367977277556 1746.3856496532678 2169.8610507319 1863.112267681151 1.147686713278638 1.0772245456700178 1.191260860085936 1.1619472749307327 0.9371929910168492 1.197449281641918 1.0531478050966931 1.1058743013065506 0.9373485859909224 1.1646432093072585 1.0 10.863498895681737 -8.752289162292652 24.713569998212062 0.9704146100540054 1.1077858239416063 0.0013557058303650393 0.09157780904205583 108.91164144394806 294155.91636959906 0.011530790489808275 0.012983665524593768 1.7689307752550277e-09 8.752289162292652 0.13737121388760087 SSPEPVALT(ph)ESETEYVIR ddPTM_A549_MK2206_60min_R1 1 SSPEPVALTESETEYVIR 18 0 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 1 SSPEPVALT(0.494)ES(0.494)ET(0.012)EY(0.001)VIR 59.861999999999995 0.0036710000000000002 1413500.0 562.32 820.85 545.68 698.73 1062.4 704.53 665.24 863.94 838.92 913.55 1049.7 True False 657.2258685959423 862.6277588661749 623.0656293286648 869.9188813671814 906.1223673527696 779.0828969708353 786.1054969939644 986.4061407052861 648.9059594799562 707.1784205119701 789.0305197538169 0.832953671806005 1.0932755289812122 0.789659732709789 1.1025161379544637 1.1483996431918582 0.9873926007499871 0.9962928902157484 1.2501495392257473 0.8224092012086167 0.8962624420822338 1.0 9.62393729463439 SSPEPVALTES(ph)ETEYVIR ddPTM_A549_PD325901_60min_R1 1 SSPEPVALTESETEYVIR 18 0 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 1 SSPEPVALT(0.005)ES(0.967)ET(0.027)EYVIR 99.45100000000001 8.4436e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSPFKVS(ph)PLTFGR ddPTM_A549_MK2206_60min_R1 1 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 1 S(0.05)S(0.187)PFKVS(0.384)PLT(0.379)FGR 97.12899999999999 4.5813e-05 114560000.0 2704.9 3701.9 3427.2 3217.1 4890.3 3307.4 3587.6 2951.7 5494.3 5353.9 5354.7 True False 3161.4209915442566 3890.3108979066737 3913.2284944201747 4005.289644421106 4170.943348141239 3657.3868727255617 4239.4204813534125 3370.112514202134 4249.849822594198 4144.450271554963 4024.9802077981913 0.7854500713864796 0.9665416218368968 0.9722354626337035 0.9951079105087434 1.0362643125698485 0.9086720142473157 1.053277348579194 0.8372991518499184 1.0558685020016578 1.0296821493743757 1.0 11.974765973682732 -4.532003877645999 1.1822710682391877 1.0057373471628128 3.723308109921008e-18 0.43165738796212394 0.06395248398775373 4.563521235937055 1.4967369669035655 0.00907355706732488 8.617668276358327 2.937623422950939e-05 4.532003877645999 -1.0057373471628128 SSPFKVS(ph)PLTFGR ddPTM_A549_PD325901_60min_R1 1 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 1 S(0.001)S(0.003)PFKVS(0.99)PLT(0.007)FGR 74.789 0.00093017 5326600.0 4290.8 4764.3 3949.5 4844.9 5931.3 5120.5 5346.7 5792.9 5263.3 5447.8 5445.5 True False 4726.398857279992 5165.804281312306 4217.536820272844 5144.158469433757 5514.705949874168 5078.800345696364 5550.171594326501 5677.356065057861 5042.101804618788 5103.824978272635 4775.7380218686285 0.9896687874496659 1.0816766450876327 0.8831172901361591 1.0771441913015518 1.1547337656759489 1.063458741337984 1.1621599779786194 1.1887913530978091 1.0557743706900276 1.0686986922024744 1.0 12.221507982881784 -5.241724862086401 21.98766840269199 1.0526029633665004 0.9896685240298146 0.026301083416489512 0.08219030820161079 2446.1381596710926 2727952.8420513337 0.011838656435615703 0.5051714329262657 5.731590285448014e-06 5.241724862086401 -0.06293443933668574 SSPNPFVGS(ph)PPKGLSIQNGVK ddPTM_A549_MK2206_60min_R1 1 SSPNPFVGSPPKGLSIQNGVK 21 1 P98082-3;P98082 P98082-3 DAB2 Disabled homolog 2 1 SSPNPFVGS(1)PPKGLSIQNGVK 135.58 2.5077e-18 7483900.0 2060.3 2433.5 2605.9 2432.4 3638.4 2458.1 2080.9 1990.2 3961.5 3784.8 4123.4 True False 2408.028270501176 2557.354755681107 2975.4558046246293 3028.338109194585 3103.1961797593344 2718.214510445276 2458.9725943941144 2272.3169447318787 3064.2265752155727 2929.811051342242 3099.4459799493993 0.7769221615988573 0.825100605793703 0.9599960198929506 0.9770578770480861 1.0012099581132226 0.8770001245479532 0.7933587519516178 0.7331364893699409 0.988636870924138 0.9452692740236348 1.0 11.597794644222773 -8.949842689977027 24.99928448704568 0.9949871546685367 0.8745887210872809 0.2518300155773936 0.08253096145841594 100.93079481490646 50305.73848199033 0.015251085118685516 0.016233821422450914 1.1224249451204943e-09 8.949842689977027 -0.12039843358125579 SSPNPFVGS(ph)PPKGLSIQNGVK ddPTM_A549_PD325901_60min_R1 2 SSPNPFVGSPPKGLSIQNGVK 21 1 P98082-3;P98082 P98082-3 DAB2 Disabled homolog 2 1 SSPNPFVGS(0.994)PPKGLS(0.006)IQNGVK;S(0.002)S(0.002)PNPFVGS(0.995)PPKGLSIQNGVK 116.72 3.6762e-15 22178000.0 6267.8 6679.4 7973.1 7694.599999999999 8689.3 10193.6 9221.6 10235.1 9595.0 9212.4 9911.3 True False 6904.102441889511 7242.296479356336 8514.202512145195 8169.877966295483 8078.993544457639 10110.586701277312 9572.53303425314 10030.952901219385 9191.755517511303 8630.727491801976 8692.27293290727 0.7942804482993062 0.8331878825316675 0.9795139404691339 0.939901223690975 0.9294454519337659 1.1631694931023828 1.1012692661793182 1.1540080458408215 1.0574628280151084 0.9929195227093831 1.0 13.085517759776064 -5.851154542187508 0.8561852159621949 1.048527846303745 0.7490166140859588 0.6490296494567287 0.06750772621363625 0.6114679591252603 0.5413858582463649 0.011462898026928637 0.14147248906972254 1.408787397099301e-06 5.851154542187508 -0.2995112322177863 SSPNVANQPPS(ph)PGGK ddPTM_A549_MK2206_60min_R1 2 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK 171.46 3.0374000000000002e-27 40417000.0 4113.4 5026.6 3867.6 4412.3 5346.4 4611.1 4164.3 4119.3 6543.9 6283.4 6016.3 True False 4807.641357025447 5282.432469655497 4416.083836665346 5493.313698075677 4559.951642333255 5099.043541399545 4920.899406427705 4703.22338982717 5061.717098460983 4863.975575989176 4522.286668567098 1.0630996461241067 1.1680888136464056 0.9765156789727789 1.2147203617713718 1.008328745284538 1.1275365572999365 1.0881440667243036 1.040010006998827 1.1192826703453556 1.0755566668953216 1.0 12.142836732348952 -10.903486654978755 0.9961026915416833 0.9964448382015154 1.0918187608226604 0.03651415630328103 0.06872833546830744 0.6761934381359419 1.1151483345403739 0.04841311124401637 0.009896729097015718 1.248858818993275e-11 10.903486654978755 0.09537392262114497 SSPNVANQPPS(ph)PGGK ddPTM_A549_PD325901_60min_R1 3 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK 195.6 2.1905e-38 48211000.0 15337.6 15380.6 16615.3 16723.1 19258.6 18695.2 17833.6 18955.1 19630.3 21725.2 22568.0 True False 16894.661861055643 16676.777140220394 17742.914173915542 17756.04790608428 17905.942374563183 18542.952489573814 18512.267406920357 18577.025660511703 18805.306757207098 20353.467164354166 19792.279070339027 0.8535986078720065 0.8425900362941241 0.8964563459750984 0.8971199245413698 0.9046933054514812 0.9368780838060499 0.9353277276017741 0.9385996223320983 0.9501334682264551 1.0283538895152373 1.0 14.272650127061846 -2.000000000000072 0.1156823337975811 1.0342982067117064 0.43152900211344847 0.9284033017708416 0.014263747519375182 11.4941838361294 0.08881623129290059 0.041078126296510115 1.1182895108421074 0.009999999999998344 2.000000000000072 -0.6027692045982579 SSPPLRT(ph)PDVLESSGPAVR ddPTM_A549_PD325901_60min_R1 2 SSPPLRTPDVLESSGPAVR 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 SSPPLRT(1)PDVLESSGPAVR;SSPPLRT(1)PDVLESSGPAVR 138.92 1.0843e-17 18720300.0 3147.0 3243.2 3899.2 4344.700000000001 3947.4 3637.6 3766.0 3739.2 3772.9 3713.9 3173.0 True False 3466.4811233010464 3516.5158460113894 4163.823159794372 4613.0622514703855 3670.148241790719 3607.9765916424353 3909.317190834275 3664.6187226543475 3614.3381336131733 3479.4037201818605 2782.741115304224 1.2457073725746393 1.263687745393069 1.4963027415287107 1.6577403575560643 1.3188967603224129 1.2965548867624332 1.4048440113003067 1.316909683944391 1.298840957117937 1.2503512098363034 1.0 11.442290982393912 -10.241970801177143 0.45246969487454175 0.9492848743663621 1.3990777409536272 0.28476103994327695 0.1323066183195974 0.729691822063713 0.250951419001049 0.1437766023791799 0.034439831927697284 5.72834542946687e-11 10.241970801177143 0.44979286658726514 SSPS(ph)PALEQPFRDR ddPTM_A549_MK2206_60min_R1 2 SSPSPALEQPFRDR 14 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.023)S(0.023)PS(0.953)PALEQPFRDR;S(0.103)S(0.103)PS(0.793)PALEQPFRDR 97.235 1.2059000000000001e-05 20153100.0 1195.4099999999999 1498.22 1278.24 909.5899999999999 1618.6 1090.72 1416.98 1352.51 2030.2 1699.35 2044.99 True False 1397.1659830315054 1574.4729985849783 1459.513652750831 1132.4395908330464 1380.5060841464544 1206.139266438661 1674.426924313792 1544.2324343881594 1570.3629415632092 1315.4656547501677 1537.16254414724 0.9089253367194168 1.0242722896025527 0.9494855689191375 0.7367077705248676 0.8980872513468037 0.7846530420813641 1.0892972449069795 1.004599312068745 1.0215984949297523 0.85577524625409 1.0 10.586054012629132 -7.769270061708835 24.997901964812343 1.015342312511572 0.8870430269488996 0.2613860316241352 0.08930902426426944 135.4740854481435 432474.01667215856 0.011882183885291235 0.016579645028886657 1.701100367068964e-08 7.769270061708835 -0.12829928556267234 SSPS(ph)PALEQPFRDR ddPTM_A549_PD325901_60min_R1 2 SSPSPALEQPFRDR 14 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 S(0.002)S(0.007)PS(0.991)PALEQPFRDR;S(0.052)S(0.052)PS(0.897)PALEQPFRDR 149.97 5.7303e-14 28622000.0 3107.9 2861.8999999999996 3471.0 3605.9 3750.9 3459.8 3635.8 3258.3 3489.4 3881.3999999999996 4654.9 True False 3423.4117200849428 3103.0823568389233 3706.562932818595 3828.6282534069223 3487.449723902521 3431.624535893036 3774.162358586102 3193.3106504130974 3342.7526527153673 3636.327741596132 4082.3768098423056 0.8385829823036798 0.760116594175634 0.9079423839275073 0.9378429360504855 0.8542694333101589 0.8405947553933888 0.9245012242590832 0.7822184965175836 0.8188251130214732 0.8907378987724056 1.0 11.995193636214863 -10.793639868402469 1.0136586558161265 1.0010053945513062 0.8514536322916121 0.19075302849094367 0.061146246936023926 0.3599494819033145 0.6497350653346936 0.038847514962278715 0.009485938677661333 1.608274335412223e-11 10.793639868402469 -0.14955176225969413 SSPS(ph)PEVVKPK ddPTM_A549_MK2206_60min_R1 2 SSPSPEVVKPK 11 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(0.119)S(0.119)PS(0.763)PEVVKPK;S(0.09)S(0.09)PS(0.821)PEVVKPK 95.264 7.9541e-05 49035000.0 7357.1 7814.8 7613.799999999999 6601.3 10256.8 7774.7 7127.2 8025.0 11468.2 11799.9 11787.099999999999 True False 8598.798616174441 8212.539940290406 8693.551327852569 8218.61879634362 8748.038307100798 8597.413593571824 8422.11998402889 9162.56832553177 8870.671010952217 9134.29439461353 8860.037762589507 0.9705148946973885 0.926919293162261 0.9812092861003473 0.9276053913726864 0.9873590318134293 0.9703585722708109 0.9505738248193846 1.03414551619855 1.0012001357835751 1.0309543412085713 1.0 13.113097132402258 -8.241773105681702 24.947311061972073 1.0031009755024007 0.9591181696932449 0.5862347169763014 0.02215119138578768 450.2497046054572 571156.9201375878 0.003025289897091333 0.0039035673152413093 5.730953627198699e-09 8.241773105681702 -0.04398280580915581 SSPS(ph)PEVVKPK ddPTM_A549_PD325901_60min_R1 2 SSPSPEVVKPK 11 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(0.025)S(0.033)PS(0.942)PEVVKPK;S(0.049)S(0.049)PS(0.903)PEVVKPK 108.66 3.2401e-05 101776000.0 23880.0 22427.0 22959.0 22764.0 26848.0 25157.0 24580.0 25233.0 25734.0 25903.0 26998.0 True False 26304.280020473143 24317.00199756336 24517.135803682566 24170.080579204965 24962.289100571837 24952.129732776768 25515.405350692094 24729.708020094447 24652.489472395606 24267.48015936638 23677.417154422787 1.1109438098301898 1.0270124413895838 1.0354649598722352 1.0208073127896111 1.0542657139403842 1.0538366397838235 1.0776262116886335 1.0444428063588473 1.041181532242873 1.0249209194185005 1.0 14.5312240930443 -10.176959783307984 0.6478916117957856 0.9995189228887935 1.0513412747247441 0.26291923826121 0.024581911224944717 0.5991242115775741 0.4729682526745734 0.015601390153590937 0.0050910985220407575 6.653347649155857e-11 10.176959783307984 0.05182235183595063 SSPS(ph)PQKR ddPTM_A549_MK2206_60min_R1 2 SSPSPQKR 8 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 S(0.001)S(0.003)PS(0.997)PQKR;SSPS(1)PQKR 101.38 0.00096203 174287000.0 24639.5 19419.7 13947.099999999999 9472.7 12754.4 11080.1 9910.1 10221.5 12218.6 30617.0 30790.0 True False 28798.045222061697 20408.079781754826 15925.00850097095 11793.511925245662 10878.244655651519 12252.588827624875 11710.636891587821 11670.428927030898 9451.106609094786 23700.598435570017 23143.993239230254 1.2442988953715877 0.8817873203990608 0.6880838728373478 0.5095711791539523 0.4700245347986162 0.5294068616843575 0.5059903349668151 0.504253039067127 0.4083611030906575 1.024049661205236 1.0 14.498350186492925 -5.383665162061231 1.987066490794499 0.6406017938530708 1.3367673161549476 0.46870149048405374 0.19697875295688866 0.4834292933771358 2.4483434168967686 0.03381336521703224 0.5550305279235502 4.1336608145487345e-06 5.383665162061231 0.6961655223018768 SSPS(ph)PQKR ddPTM_A549_PD325901_60min_R1 3 SSPSPQKR 8 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 SS(0.004)PS(0.996)PQKR;S(0.042)S(0.042)PS(0.917)PQKR;S(0.023)S(0.023)PS(0.953)PQKR 115.42 0.00054626 429617000.0 20077.5 19941.300000000003 13727.4 14114.400000000001 15564.1 13186.240000000002 10100.33 12932.679999999998 13574.29 18301.9 25125.2 True False 22115.753019725693 21621.823334998426 14659.023913562096 14986.21443187184 14470.931309230113 13078.855633323934 10484.703585262645 12674.727551908807 13003.809797165039 17146.3149105782 22034.959681765424 1.0036665979483106 0.9812508689494503 0.6652621164400345 0.6801108170065486 0.6567260171211129 0.5935502411718534 0.4758213192438489 0.5752099270867973 0.5901444788177249 0.7781414242735047 1.0 14.427506636411211 -5.751361345651841 23.74512595833825 0.7257343390607873 0.992459120439635 0.4042004378599504 0.13806826755936355 129.2819361554106 304591.6265558767 0.02696462754427671 0.10176245255858225 1.7727139175339786e-06 5.751361345651841 0.2667247813788477 SSPS(ph)TGSLDSGNESKEK ddPTM_A549_PD325901_60min_R1 1 SSPSTGSLDSGNESKEK 17 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 S(0.003)S(0.013)PS(0.36)T(0.327)GS(0.297)LDSGNESKEK 47.808 0.01746 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSPSGASS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SSPSGASSPR 10 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 SSPS(0.001)GAS(0.182)S(0.817)PR;SSPSGAS(0.159)S(0.841)PR 103.01 0.00038356 118058000.0 2343.8 2038.8500000000001 1757.8600000000001 1455.5500000000002 2067.63 2005.23 1678.33 1790.8000000000002 2404.8 2855.6 2972.3 True False 2739.376139591638 2142.618756367547 2007.1509807427203 1812.159815342123 1763.4843659728983 2217.4221076360523 1983.2608363445963 2044.6513840949904 1860.1166396764877 2210.5179766996675 2234.1958786932155 1.2261127888186345 0.9590111488437477 0.8983773535186654 0.8111015836275098 0.7893150205810795 0.9924922558415181 0.8876844037079723 0.915162096391884 0.8325664984954106 0.9894020474125137 1.0 11.12553996145514 -5.260873284068899 2.910416115908544 0.9046297005613383 1.2819130175819315 0.6476599866871148 0.06857920624505506 0.2156250275593662 2.5683491008584047 0.010696572397631778 0.19023510107250832 5.4843696134162635e-06 5.260873284068899 0.37728331702059326 SSPSGNTQSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SSPSGNTQSSPK 12 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 SSPS(0.002)GNT(0.005)QS(0.183)S(0.81)PK;SSPSGNT(0.001)QS(0.046)S(0.953)PK 60.49 0.0086852 6206900.0 1577.8200000000002 1303.16 971.5 668.5799999999999 1444.74 1282.8000000000002 1122.01 1451.03 1681.72 1868.65 1943.9 True False 1844.1174420046432 1369.4852777536014 1109.273308336018 832.3821300136964 1232.2206598355056 1418.5450445462757 1325.8646934673166 1656.717946093005 1300.8131051550001 1446.520667166212 1461.1759810893057 1.2620775771511485 0.9372486924762143 0.7591647568070861 0.569665899786524 0.8433074973740575 0.9708242285017246 0.9073956255966412 1.1338250611387157 0.890250813037075 0.9899701924253038 1.0 10.512914228549834 -7.261716569946793 23.427869359914656 0.9604556268780949 0.8544707003593186 0.08138697598270717 0.16614905550514944 22.15604449415624 1872725.3545651748 0.02517625221164674 0.04180242482858782 5.473730739613017e-08 7.261716569946793 -0.10598492651877633 SSPST(ph)GSLDSGNESK ddPTM_A549_MK2206_60min_R1 1 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 SSPS(0.002)T(0.902)GS(0.095)LDSGNESK 264.31 1.8839999999999997e-90 14731000.0 4793.9 4257.0 2884.6 3582.8 5117.5 3759.7 3749.1 4580.1 5368.2 5509.4 5888.8 True False 5602.993120397798 4473.663116882873 3293.679655405124 4460.586160838002 4364.722529111256 4157.548958513124 4430.262940863557 5229.343200967983 4152.311271253878 4264.82271355552 4426.448437388085 1.2657988000203515 1.0106664925984425 0.7440908217940579 1.0077122153195262 0.9860552067532382 0.9392516409761612 1.0008617526058254 1.1813857712197053 0.9380683701590868 0.9634863647190849 1.0 12.111933900650447 -5.278893755006238 4.869708794169352 0.9736154758757022 1.2778778683836851 0.4300010681311691 0.09607740544305346 0.1097622422950824 7.324657744578116 0.012662375547469256 0.10792469462867235 5.261459660175312e-06 5.278893755006238 0.3042623925079829 SSPSTGS(ph)LDSGNESK ddPTM_A549_MK2206_60min_R1 1 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 SSPST(0.001)GS(0.998)LDS(0.001)GNESK 207.4 6.6955e-40 14675000.0 3752.6 3984.4 3698.0 3702.5 4691.5 3296.7 3328.6 3705.7 5085.1 4694.3 4845.9 True False 4385.947137738536 4187.188941251612 4222.432006409258 4609.612666211543 4001.3865647924695 3645.5546058276504 3933.363533903718 4230.99432323029 3933.332969236074 3633.8543696670563 3642.529289963815 1.2040938558333751 1.1495278714130004 1.1592033090971259 1.2654977624784824 1.0985187067177213 1.0008305536134388 1.0798440371478226 1.1615539605646716 1.0798356460917156 0.997618434992229 1.0 11.830724857862142 -2.000000071058226 0.06444405124650235 0.834064158716501 1.7585053999571205 0.5454268732210168 0.0568677480605449 141.59160716643575 0.6594709804349823 1.7676504992280517 12.040458097956222 0.009999998363824016 2.000000071058226 0.9244412412406195 SSPSTGS(ph)LDSGNESK ddPTM_A549_PD325901_60min_R1 2 SSPSTGSLDSGNESK 15 0 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 SSPST(0.016)GS(0.984)LDSGNESK;SSPS(0.001)T(0.043)GS(0.956)LDSGNESK 208.39 2.6648e-45 35641000.0 8477.8 8833.3 8953.1 8487.6 10672.7 9697.7 8663.6 9498.7 9115.7 10700.3 10687.8 True False 9338.460014973505 9577.713191469042 9560.711205363921 9011.859775261813 9923.08637081619 9618.725146462186 8993.298038903831 9309.240976914 8732.59882970066 10024.68123187538 9373.268355546325 0.9962864244090246 1.0218114779357346 1.0199975977116544 0.9614426295529392 1.0586580896240456 1.0261868946460517 0.9594623452322627 0.9931691512284038 0.9316492922699083 1.0694968768224375 1.0 13.194336472158797 -7.763476813823947 24.99965996370952 0.9686534280691151 1.0143208717263414 0.0 0.041035560109780836 49.906857019826425 612370.1890492686 0.005012199586053199 0.007113879747712427 1.7239441267462867e-08 7.763476813823947 0.0456674436572263 SSPSTGS(ph)LDSGNESKEK ddPTM_A549_MK2206_60min_R1 2 SSPSTGSLDSGNESKEK 17 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 SSPST(0.001)GS(0.957)LDS(0.042)GNESKEK;SSPS(0.001)T(0.018)GS(0.98)LDS(0.002)GNESKEK 125.04 7.819400000000001e-11 20767100.0 7789.4 8596.5 7697.8 8177.1 10892.400000000001 7820.099999999999 7854.2 6022.4 12862.099999999999 13896.7 13210.2 True False 9104.060287454182 9034.025131379753 8789.463790951106 10180.48986708397 9290.142389075036 8647.617791437742 9281.206473588472 6876.093642826485 9948.854886553116 10757.425818322694 9929.742757027596 0.9168475468320615 0.9097944783097311 0.885165306496034 1.0252521254771594 0.9355874181634872 0.8708803443389858 0.9346875040664943 0.6924744991968753 1.0019247356143233 1.0833539278456454 1.0 13.277540627998036 SSPSTGS(ph)LDSGNESKEK ddPTM_A549_PD325901_60min_R1 1 SSPSTGSLDSGNESKEK 17 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 SSPS(0.001)T(0.027)GS(0.972)LDSGNESKEK 142.99 8.841600000000001e-17 11753000.0 4502.1 4070.0 4931.5 5255.6 6344.7 6270.6 5784.3 6170.8 5084.7 4953.0 5976.1 True False 4959.149877729149 4412.993183666242 5266.181245518559 5580.226475666384 5899.070160026747 6219.534312610805 6004.424701790413 6047.71855310105 4871.007741520555 4640.266734715732 5241.077585619154 0.9462080644133988 0.8420011174371718 1.0047897897883227 1.064709763308563 1.1255452840868145 1.1866899909431623 1.1456469788323274 1.1539074654600068 0.9293905045187609 0.8853650149061006 1.0 12.355647750546808 -3.8559761620270305 10.390915567331875 1.009718029007499 0.6181146528092848 0.0 0.11330721758384862 0.0 0.0 0.01587322922339151 0.0 0.00013932332739737032 3.8559761620270305 -0.39160337619821417 SSPSVLIHS(ph)LGK ddPTM_A549_MK2206_60min_R1 1 SSPSVLIHSLGK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 SSPSVLIHS(1)LGK 63.708999999999996 0.0021105 2081500.0 566.84 729.69 381.79 435.62 640.91 409.41 442.31 707.57 874.53 515.64 965.25 True False 662.5087340925528 766.8281042420158 435.9335629332047 542.346919555725 546.6329880083433 452.73349445563673 522.6720016466243 807.8702143422453 676.4503513374414 399.156565872467 725.5517854552452 0.9131101974711064 1.0568895558032043 0.6008303909826086 0.7474958099860937 0.753403132576347 0.6239850876689257 0.7203786306151467 1.113456310820529 0.9323253899968074 0.5501420765190695 1.0 9.502934778502603 -8.246214526348997 24.9276475880859 0.9780556507246702 0.7704185482994812 0.03960995345349683 0.1808979157809198 642.2569515018777 1051568.087522496 0.02091035516658906 0.026942566684493807 5.672643273687014e-09 8.246214526348997 -0.20763710242518896 SSPSVLIHS(ph)LGK ddPTM_A549_PD325901_60min_R1 1 SSPSVLIHSLGK 12 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 SSPSVLIHS(1)LGK 81.185 0.00023226 4894900.0 1091.3 826.09 540.7 850.99 946.93 943.5 1088.5 829.7 875.38 1107.8 956.25 True False 1202.0879726274018 895.7075034631074 577.395153493234 903.5537195614846 880.4209035311565 935.8164488164285 1129.9234631500553 813.1509826129419 838.5908228159508 1037.8533189416696 838.6373121681894 1.4333824111874502 1.0680510996432657 0.6884920872414474 1.0774070106962712 1.0498231962216669 1.1158774302528884 1.3473326869141833 0.9696098311088069 0.9999445656047447 1.2375472732764927 1.0 9.711903208943651 -5.277589334122639 4.944461707462318 1.0178031448953921 1.450075279291283 0.2933162887603691 0.16045243785887228 0.11678900971161289 8.321689903248263 0.019522516268800753 0.16593188953327376 5.2772864214099555e-06 5.277589334122639 0.43227213439589085 SSPTEGCNDAFVEVGMPRS(ph)PSHSGNAGDLK ddPTM_A549_PD325901_60min_R1 2 SSPTEGCNDAFVEVGMPRSPSHSGNAGDLK 30 1 Q9H694;Q9H694-2;A6NGY7 Q9H694 BICC1 Protein bicaudal C homolog 1 1 SSPTEGCNDAFVEVGMPRS(0.799)PS(0.166)HS(0.035)GNAGDLK;SSPTEGCNDAFVEVGMPRS(0.818)PS(0.176)HS(0.007)GNAGDLK 139.16 9.242399999999999e-29 24208000.0 4673.200000000001 4801.6 5174.9 5835.700000000001 5517.299999999999 5817.299999999999 4760.1 5705.299999999999 5199.5 6294.700000000001 6789.9 True False 5147.619823771989 5206.2476832166685 5526.09983320166 6196.157935163697 5129.783881651703 5769.925837519667 4941.2482103266675 5591.503315778736 4980.98309674831 5897.251567739779 5954.785344722396 0.8644509458824101 0.874296449297011 0.9280099135898037 1.0405342218851306 0.861455717492508 0.9689561425809301 0.8297945138704277 0.9389932620718848 0.8364672794062767 0.9903382282228513 1.0 12.539833788102262 -11.082423782020262 1.4206242173107335 0.9997505257570516 0.898919742485373 0.24906466698442675 0.059808521263279076 0.4534754964746758 1.6410809848467618 0.04294123929336816 0.009537716701055982 8.271346566264915e-12 11.082423782020262 -0.1008307832716786 SSQDGDTPAQAS(ph)PPEEK ddPTM_A549_MK2206_60min_R1 2 SSQDGDTPAQASPPEEK 17 0 A0A0C4DGE6;E9PNT2;E9PIR1;A0A0G2JRG8;A0A0G2JNY3;Q6ZUM4-2;Q6ZUM4-3;Q6ZUM4;E9PNX6 A0A0C4DGE6 ARHGAP27 Rho GTPase-activating protein 27 1 SSQDGDTPAQAS(1)PPEEK;SSQDGDTPAQAS(1)PPEEK 133.71 3.1659e-12 7218400.0 1288.19 1809.99 1528.83 1511.17 1904.81 1619.47 1755.6799999999998 1759.3200000000002 2696.6 2702.5 2733.6 True False 1505.604978778288 1902.1107599076402 1745.6410828444195 1881.4067178389987 1624.6149722865496 1790.841240482817 2074.6643301099784 2008.7089976915347 2085.824405585335 2092.0033730322366 2054.771676478072 0.7327359024915756 0.925704194622686 0.8495547718647214 0.9156281154623345 0.7906547432419249 0.8715524264731748 1.0096811990644152 0.9775825804327369 1.0151124961779152 1.01811962710036 1.0 11.00476237710265 -7.723523922485792 5.007745537488625 1.0050032341168513 0.8502923382864438 0.7011999642375093 0.05095249660705928 0.07700393351345754 4.523639601141232 0.007085377603729444 0.010430676991337054 1.8900621169709768e-08 7.723523922485792 -0.15471089583040754 SSQDGDTPAQAS(ph)PPEEK ddPTM_A549_PD325901_60min_R1 2 SSQDGDTPAQASPPEEK 17 0 A0A0C4DGE6;E9PNT2;E9PIR1;A0A0G2JRG8;A0A0G2JNY3;Q6ZUM4-2;Q6ZUM4-3;Q6ZUM4;E9PNX6 A0A0C4DGE6 ARHGAP27 Rho GTPase-activating protein 27 1 SSQDGDTPAQAS(1)PPEEK;SSQDGDTPAQAS(1)PPEEK 123.14 5.322000000000001e-10 7960200.0 1057.0 1020.74 1014.3 1071.51 1149.04 932.24 1021.73 1199.18 1442.3600000000001 999.8199999999999 1131.77 True False 1164.3058618777259 1106.761342087342 1083.13649748139 1137.6947391242277 1068.3353943728046 924.6481465231872 1060.6124942621093 1175.2614141614886 1381.742625142011 936.6911945696517 992.5694648811422 1.1730220433661525 1.1150467360184952 1.091245032015057 1.146211705455259 1.0763331254611335 0.9315702116968827 1.0685524104744801 1.1840596106814785 1.3920865733135075 0.9437034159436067 1.0 9.955024262441032 -8.270899844777592 18.227654365098125 1.1902435948040022 1.0833211579919322 0.0 0.1258135653769168 31.84619465132264 61358.40077642198 0.024574367704083656 0.03003785530825845 5.3592023500249405e-09 8.270899844777592 -0.10692243681207003 SSQGTESGKDS(ph)EQENGLGSLSPSDLNKR ddPTM_A549_MK2206_60min_R1 1 SSQGTESGKDSEQENGLGSLSPSDLNKR 28 2 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 S(0.044)S(0.044)QGT(0.153)ES(0.343)GKDS(0.416)EQENGLGSLSPSDLNKR 63.848 0.00013015 5179900.0 1718.5 1938.9 2046.5 1874.3 2283.8 2049.1 1604.3 1469.2 2835.4 3167.5 2816.6 True False 2008.5407867088632 2037.581728288513 2336.7244729898734 2333.5035841405247 1947.8560453315652 2265.934401917503 1895.7805436044393 1677.4635992362971 2193.1864272033913 2451.9595500757086 2117.160485794607 0.9486955760725068 0.9624125057878044 1.1037068227318914 1.1021854978862031 0.9200323066678154 1.0702704953739293 0.8954354458835084 0.7923176398253606 1.035909389920552 1.1581358931113082 1.0 11.047914917864203 -6.764201627731572 24.99866899072794 0.9892030877019502 1.0297943132243559 0.04580749115846228 0.10071110118709461 219.53792465450715 1986882.2365170042 0.01331692313435433 0.02599100764912811 1.7210693571952362e-07 6.764201627731572 0.04059122552240568 SSQGTESGKDS(ph)EQENGLGSLSPSDLNKR ddPTM_A549_PD325901_60min_R1 2 SSQGTESGKDSEQENGLGSLSPSDLNKR 28 2 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 SSQGT(0.004)ES(0.003)GKDS(0.992)EQENGLGSLSPSDLNKR;SSQGT(0.031)ES(0.138)GKDS(0.831)EQENGLGSLSPSDLNKR 119.96 3.5306e-21 24563000.0 4710.5 5513.0 6001.299999999999 5085.200000000001 6277.9 6282.1 5722.3 5799.3 6588.799999999999 6079.1 7012.700000000001 True False 5188.706492313182 5977.599857875182 6408.584306748555 5399.301254672867 5836.961961579256 6230.940660423615 5940.065257862708 5683.628412037159 6311.895649169202 5695.264588534301 6150.182357167958 0.843667096515571 0.9719386370565691 1.0420153313469531 0.877909131975583 0.9490713644899249 1.0131310420676445 0.9658356310263937 0.9241398192710438 1.0262940645674952 0.9260318243891653 1.0 12.586413472655673 -2.0000000000000013 0.22054474565824012 1.0135506193029507 0.4272148027622767 0.04541995971318069 0.05781376698111911 46.15223243727861 0.5363674845104163 0.0328030890715204 9.77750955226865 0.009999999999999969 2.0000000000000013 -0.586335816540674 SSQKS(ph)PELGK ddPTM_A549_PD325901_60min_R1 3 SSQKSPELGK 10 1 Q9UEG4 Q9UEG4 ZNF629 Zinc finger protein 629 1 S(0.018)S(0.105)QKS(0.877)PELGK;S(0.06)S(0.06)QKS(0.879)PELGK;S(0.004)S(0.005)QKS(0.99)PELGK 69.45100000000001 0.0011626 127540400.0 24589.1 24260.5 22517.9 23152.3 29023.3 25385.9 27492.2 26729.7 25928.4 26939.4 28623.8 True False 27085.367330461297 26305.017477232144 24046.100105132773 24582.36498831167 26984.80353294944 25179.165647068334 28538.430715309103 26196.555164456007 24838.71951643982 25238.441686493235 25103.254061218122 1.078958419669796 1.0478728141412799 0.9578877720988953 0.9792501373871219 1.0749524132267025 1.003023973930435 1.1368418869407837 1.043552166606437 0.9894621412772546 1.0053852629999855 1.0 14.615586768175465 -8.760722836712906 24.990476129293864 0.9950237872102559 1.0388949274904535 0.1359520608061342 0.04687562474764725 26.98443492900263 941115.8881456321 0.008134456436467563 0.00896038580126478 1.7349108508421433e-09 8.760722836712906 0.043871140280197674 SSQPDPDKNPAS(ph)SK ddPTM_A549_MK2206_60min_R1 2 SSQPDPDKNPASSK 14 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SSQPDPDKNPAS(0.82)S(0.18)K;SSQPDPDKNPAS(0.782)S(0.218)K 66.12 0.0012167999999999999 15441000.0 7620.200000000001 7671.1 7877.799999999999 7496.2 11579.7 7999.5 8648.2 8136.2 11977.0 13411.7 13197.599999999999 True False 8906.303463997017 8061.526224082735 8994.990497590818 9332.7693365172 9876.341469535837 8846.001780361663 10219.46599588599 9289.531266067483 9264.228623338859 10381.987655169818 9920.271684769898 0.8977882609475731 0.8126315972232089 0.9067282412638337 0.940777594916613 0.9955716721648356 0.8917096286730223 1.0301598908400291 0.9364190378303087 0.9338684380551564 1.0465426739379295 1.0 13.27616391665558 -6.14510586404651 2.493332031948545 0.9657392375090186 0.855532741600813 0.48274022619843815 0.04721900604813792 0.1658301089695391 1.9839425407698683 0.005716801595215839 0.01865408060394536 7.159688636714001e-07 6.14510586404651 -0.11020649590820553 SSQPDPDKNPAS(ph)SK ddPTM_A549_PD325901_60min_R1 2 SSQPDPDKNPASSK 14 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SSQPDPDKNPAS(0.953)S(0.047)K;SSQPDPDKNPAS(0.903)S(0.097)K 79.311 0.00016512 14411000.0 4386.0 4346.6 3899.3 4022.9 4717.7 4527.8 4143.1 4756.0 5187.0 4595.7 5754.8 True False 4831.263491197452 4712.903236394025 4163.929946395722 4271.3853963312085 4386.345027181455 4490.927097987308 4300.767937691314 4661.13784899018 4969.008428278387 4305.52671769293 5046.996082682871 0.9572552488745463 0.9338036248066098 0.8250313410551073 0.8463223125904696 0.8691001449816406 0.8898217918964643 0.8521441006162067 0.9235469520143599 0.9845477085524055 0.8530869941559788 1.0 12.301209251525059 -8.64005539552102 2.7844983696978125 0.993486451784673 0.8801928619336854 0.05959936799924914 0.055527178122503996 0.11929876643783234 1.8503373848360303 0.006609591999102802 0.007464892824230075 2.290575464588158e-09 8.64005539552102 -0.11329358985098759 SSQPS(ph)PTAVPASDS(ph)PPTKQEVK ddPTM_A549_MK2206_60min_R1 2 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(0.014)S(0.016)QPS(0.655)PT(0.315)AVPAS(0.143)DS(0.85)PPT(0.008)KQEVK;S(0.259)S(0.327)QPS(0.394)PT(0.02)AVPAS(0.01)DS(0.948)PPT(0.042)KQEVK 127.42 3.709e-22 41489000.0 6963.0 9059.4 8758.5 9184.1 12419.3 9749.5 9450.5 9209.1 14119.7 13187.1 13651.8 True False 8138.1841709943565 9520.484764173987 10000.587000577469 11434.204912289917 10592.437421747227 10781.185618805677 11167.533520746589 10514.518126685933 10921.610494527657 10208.12495116129 10261.681289487617 0.7930653799715417 0.9277704594009429 0.9745563829605952 1.114262330871986 1.0322321579601625 1.0506256542824282 1.0882752256384103 1.024638929047361 1.0643100469039213 0.9947809392227771 1.0 13.324979503212663 -5.454141773972185 1.5883027065616333 1.0404670096503856 0.7554225795162239 0.8127922444260156 0.036324187660071935 0.22666194350931457 0.7042112957478757 0.005311861977453114 0.08859180024996276 3.514456935359178e-06 5.454141773972185 -0.2850444301341617 SSQPS(ph)PTAVPASDS(ph)PPTKQEVK ddPTM_A549_PD325901_60min_R1 2 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(0.193)S(0.228)QPS(0.54)PT(0.039)AVPAS(0.001)DS(0.996)PPT(0.003)KQEVK;S(0.155)S(0.188)QPS(0.412)PT(0.245)AVPAS(0.017)DS(0.898)PPT(0.085)KQEVK 148.3 1.2872e-27 94223000.0 9660.5 9943.0 11121.2 11444.7 12639.4 12365.0 11021.9 12289.3 11212.4 12387.8 13062.7 True False 10641.22684831578 10780.931504961534 11875.951509208353 12151.613126200446 11751.652147562849 12264.30353960269 11441.344435915109 12044.180270730656 10741.181820171305 11605.63219388483 11456.070711277813 0.9288723085342108 0.9410671229838303 1.0366513797367882 1.0607138723609582 1.0258012929331917 1.0705506144902912 0.9987145439536955 1.0513360622742913 0.937597374429372 1.0130552164329594 1.0 13.483824682160817 -11.78958019212471 5.71127172703738 1.0005709320760177 0.9904513606034 0.0 0.050188263015956275 1.7250069762590465 124.05252383480246 0.05910983750737088 0.007841687440104186 1.6233785672669056e-12 11.78958019212471 -0.010119571472617661 SSQPS(ph)PTAVPASDSPPTK ddPTM_A549_MK2206_60min_R1 2 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPS(0.993)PT(0.007)AVPASDSPPTK;SSQPS(0.999)PTAVPASDSPPTK 252.66 1.6097e-86 26098000.0 4019.6000000000004 4248.0 4155.3 3565.7 5153.4 3813.4 3307.8 4350.2 5561.6 6006.2 4783.0 True False 4698.0102102152705 4464.2050553249765 4744.584022777822 4439.296660070356 4395.341686667702 4216.931456869947 3908.784443143279 4966.854171928763 4301.9064800502165 4649.3952485129375 3595.2490959155048 1.3067273184360415 1.2416956200327471 1.3196815842796692 1.2347674783129097 1.222541629079656 1.172917743491188 1.0872082403369425 1.3815048803076018 1.1965531080829788 1.293205317482738 1.0 11.811876015547051 -14.999999981005656 0.1682745330249593 0.019023648661338943 1.29805381762377 0.0 0.11640634219076028 26.434779833472394 0.2818233087955008 8.477089168931322 0.10111093183625057 1.000000043736094e-15 14.999999981005656 1.279030168962431 SSQPS(ph)PTAVPASDSPPTK ddPTM_A549_PD325901_60min_R1 2 SSQPSPTAVPASDSPPTK 18 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPS(0.991)PT(0.009)AVPASDSPPTK;SSQPS(0.999)PT(0.001)AVPASDSPPTK 275.31 1.0513e-115 51308000.0 8601.0 10063.6 8315.2 8376.5 11372.9 8150.4 9145.9 9810.2 9629.2 10361.0 9974.7 True False 9474.167188278458 10911.694890207273 8879.519475359613 8893.897380588218 10574.106738375047 8084.025844656509 9493.952229328515 9614.52786504698 9224.518210445009 9706.804691780682 8747.875134832986 1.0830249680352049 1.2473537541429023 1.0150487219464799 1.0166923102472953 1.2087628796014962 0.9241130811832111 1.08528666481815 1.0990700846612553 1.054486726006649 1.1096185693288367 1.0 13.094716912496324 -2.0000000000264997 0.11167195239564963 0.9756999739934133 1.4602824445639793 0.021229851657431742 0.08713135788530292 114.14684117921327 0.8576400016561033 0.3494742572218403 8.583856308314546 0.009999999999389822 2.0000000000264997 0.4845824705705659 SSQPS(ph)PTAVPASDSPPTKQEVK ddPTM_A549_MK2206_60min_R1 2 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPS(0.829)PT(0.17)AVPASDSPPTKQEVK;S(0.005)S(0.005)QPS(0.836)PT(0.154)AVPASDSPPTKQEVK 184.0 6.4167e-50 28893000.0 5524.0 6540.2 6632.5 5883.6 9265.2 7110.6 6049.6 7004.3 10906.9 11070.9 11317.8 True False 6456.3161511665685 6873.068244547181 7573.088232155056 7325.08226412484 7902.301353536223 7863.038972365725 7148.734012709222 7997.1809747691195 8436.504564740308 8569.976000926024 8507.27790461059 0.7589168031841906 0.8079045167693728 0.8901893551697374 0.8610371432858624 0.928887176620092 0.924272024557266 0.8403080389362744 0.9400399357396073 0.9916808477795317 1.00736993630847 1.0 13.054481867602375 -2.090587054850962 0.16963680209574927 1.0284974077978526 7.80183331141244e-12 0.7927057271554454 0.03534477562727533 16.847212867967254 0.17549213574278114 0.04736230551552326 4.412315670911856 0.008117325198672113 2.090587054850962 -1.0284974077900508 SSQPSPT(ph)AVPASDS(ph)PPTKQEVKK ddPTM_A549_MK2206_60min_R1 1 SSQPSPTAVPASDSPPTKQEVKK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(0.042)S(0.045)QPS(0.425)PT(0.488)AVPAS(0.124)DS(0.785)PPT(0.091)KQEVKK 60.481 0.00047669999999999993 5263900.0 616.39 1209.1 1176.9 823.42 1316.8 1080.0 694.02 807.09 1618.3 1524.4 1597.1 True False 720.4215627113622 1270.638025516345 1343.80211691267 1025.1579369647284 1123.100464354413 1194.2848831540216 820.1144504596101 921.4974791094626 1251.7576338940696 1180.0369812582203 1200.495992282385 0.6001032634367196 1.0584275446855975 1.1193724306882784 0.8539453222294365 0.935530373757577 0.9948262141912237 0.6831463459535647 0.7675972973116804 1.0427003854583687 0.9829578681181034 1.0 10.22941487196721 -8.796056962576905 24.998419206176862 1.0201641073568264 0.8894697414655016 0.13154357107244996 0.14750641407302925 260.4052856909143 188045.47725539102 0.02537753769071906 0.02701704558011945 1.5993482424536531e-09 8.796056962576905 -0.13069436589132477 SSQPSPTAVPASDS(ph)PPTKQEVK ddPTM_A549_MK2206_60min_R1 2 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPSPTAVPAS(0.042)DS(0.931)PPT(0.028)KQEVK;SSQPSPTAVPASDS(0.991)PPT(0.009)KQEVK 184.0 6.4167e-50 43591000.0 7013.6 8755.8 7286.3 6685.7 10964.1 7970.0 6321.700000000001 7618.1 11753.2 11072.7 10850.5 True False 8197.324213943135 9201.432820954436 8319.60690327198 8323.696800132473 9351.295414055447 8813.38010994217 7470.271060589775 8697.989004452786 9091.118966003703 8571.369379675863 8156.021391434485 1.0050640895267915 1.1281766414465084 1.020057023392471 1.0205584807408772 1.1465511142327616 1.0805979640021603 0.9159209744637391 1.0664499989648726 1.114651192007817 1.0509253186458756 1.0 12.993649843890552 -11.17278659262844 1.5885748003293376 1.0001102663882548 1.0639258367679552 0.0 0.06416607952009608 0.6955523380587296 3.1607816935864683 0.04575417418660082 0.009740375364711994 6.717588665076248e-12 11.17278659262844 0.06381557037970031 SSQPSPTAVPASDS(ph)PPTKQEVK ddPTM_A549_PD325901_60min_R1 2 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPSPT(0.003)AVPAS(0.052)DS(0.852)PPT(0.093)KQEVK;SSQPSPTAVPAS(0.006)DS(0.991)PPT(0.003)KQEVK 160.52 2.4868e-33 70764000.0 12457.7 13498.099999999999 12905.2 13845.8 16106.599999999999 15742.1 15346.400000000001 15275.7 15388.8 16572.3 15913.800000000001 True False 13722.396533125973 14635.632258586069 13781.024477271836 14701.023619906699 14975.327980753507 15613.901556876615 15930.415649872297 14971.014179945183 14742.062251993531 15525.92214975359 13956.50348588982 0.9832259596394949 1.0486603806879606 0.987426721256123 1.0533457491534035 1.0729999813989035 1.1187545342329075 1.1414331437654226 1.0726908924632195 1.0562862157343291 1.112450705540286 1.0 13.768649928876382 -5.259794691242907 22.110837123619167 1.0460271438493913 0.9832258713025047 0.07606497063474071 0.04858021446693226 52.119691397596654 700317.5190092269 0.007130306842213997 0.06208482713827442 5.498007257123338e-06 5.259794691242907 -0.06280127254688661 SSQPSPTAVPASDS(ph)PPTKQEVKK ddPTM_A549_PD325901_60min_R1 1 SSQPSPTAVPASDSPPTKQEVKK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPSPTAVPAS(0.044)DS(0.92)PPT(0.037)KQEVKK 69.782 7.3832e-05 4047800.0 1103.5 976.74 996.25 1019.9 1235.7 1282.9 956.95 1381.6 1356.9 1354.7 1493.3 True False 1215.5265076462356 1059.053307669328 1063.8615159379217 1082.8969066390414 1148.9086949335745 1272.4524877441397 993.3672559131326 1354.042904155768 1299.8742117468562 1269.164010805451 1309.633566808635 0.928142450264372 0.808663838885918 0.8123352538453791 0.8268701521433098 0.8772749294547169 0.9716095555223898 0.7585077849934833 1.033909742749914 0.992548026173794 0.9690985654087947 1.0 10.354947489326365 -8.277630968822985 24.994359246107685 0.9991898448984263 0.8556525216036792 0.5970711009537615 0.05694809098991126 391.36978543512004 604141.8746884502 0.008729566259641807 0.010570270092605912 5.276780525718496e-09 8.277630968822985 -0.1435373232947471 SSQQPST(ph)PQQAPPGQPQQGTFVAHK ddPTM_A549_MK2206_60min_R1 2 SSQQPSTPQQAPPGQPQQGTFVAHK 25 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(0.005)S(0.005)QQPS(0.169)T(0.822)PQQAPPGQPQQGTFVAHK;S(0.002)S(0.002)QQPS(0.146)T(0.85)PQQAPPGQPQQGTFVAHK 121.7 3.6594e-17 48174000.0 1463.1399999999999 1589.96 2088.73 1138.21 2412.31 1767.02 1842.06 1901.51 2769.5 2720.8 2933.8999999999996 True False 1710.0822616614523 1670.882172731756 2384.9433219976236 1417.0715010961887 2057.462394567735 1954.0048835470534 2176.738457989149 2171.054865630145 2142.2126719827143 2106.169390322334 2205.331658479301 0.7754308768417396 0.757655732328226 1.0814442865442628 0.6425661626212442 0.9329491945834895 0.8860367446474915 0.9870345123010348 0.9844573070370776 0.9713789142535999 0.9550352130593613 1.0 11.106779922786036 -7.452752024735362 1.5835550543289394 0.9866475886240105 0.8311453258720042 0.30593877502523703 0.10313744664431154 0.31911222187796817 1.584533712504966 0.015089485711648745 0.026814913850139125 3.5257212667541475e-08 7.452752024735362 -0.1555022627520063 SSQQPST(ph)PQQAPPGQPQQGTFVAHK ddPTM_A549_PD325901_60min_R1 2 SSQQPSTPQQAPPGQPQQGTFVAHK 25 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(0.002)S(0.002)QQPS(0.135)T(0.861)PQQAPPGQPQQGTFVAHK;S(0.001)S(0.001)QQPS(0.135)T(0.862)PQQAPPGQPQQGTFVAHK 146.94 3.1637e-32 80201000.0 4143.1 5051.3 5647.1 4421.200000000001 5703.7 5246.3 4733.1 6041.4 5363.299999999999 5804.8 6172.6 True False 4563.7044620109855 5476.990778538894 6030.34616477093 4694.2874827262785 5303.091788696793 5203.575872205223 4913.220710551703 5920.899537613386 5137.899152378153 5438.283937346638 5413.409331335288 0.8430370183895346 1.0117451763411955 1.1139645638589586 0.8671591589340191 0.9796214296968222 0.9612382056691238 0.9076019214197854 1.0937468746988175 0.9491059770111313 1.0045949981774636 1.0 12.402321765262265 SSQSEGIFLGS(ph)ESDEDSVR ddPTM_A549_MK2206_60min_R1 1 SSQSEGIFLGSESDEDSVR 19 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 SSQSEGIFLGS(0.585)ES(0.415)DEDSVR 110.41 6.2834e-10 2434400.0 894.04 1093.4 692.79 832.51 1556.0 1048.7 973.9 978.2 1045.0 1470.6 1323.4 True False 1044.9320948205946 1149.0493897110014 791.0380394051565 1036.474987372794 1327.1144612207368 1159.6727379292797 1150.8450236342092 1116.8628456118606 808.3091685220932 1138.3904386239428 994.7632560181005 1.0504329432143613 1.1550983440125109 0.7952023103181074 1.0419313149157317 1.3341008055856347 1.1657776168485445 1.1569034307126325 1.1227423599083342 0.812564360044462 1.1443832808830938 1.0 9.95820940889017 -8.745989326646148 24.90027725496581 0.9114887250675269 1.103852734896695 0.05371265470267206 0.14661619063224032 220.07115482839694 354680.2487986276 0.02408821157318299 0.027264635853026895 1.794777735296389e-09 8.745989326646148 0.19236400982916824 SSQSEGIFLGSES(ph)DEDSVR ddPTM_A549_MK2206_60min_R1 1 SSQSEGIFLGSESDEDSVR 19 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 SSQSEGIFLGS(0.059)ES(0.941)DEDSVR 112.44 2.3803e-10 2136500.0 971.06 916.56 1190.1 709.36 1604.4 1087.8 1127.5 1010.7 1495.5 1329.2 1602.1 True False 1134.9511878623837 963.2089890557118 1358.8740753995821 883.1532318443808 1368.3948853358277 1202.9102739767993 1332.3521554036058 1153.9698201389365 1156.7716378227656 1028.9327968305072 1204.2543542894055 0.9424513881306117 0.7998384939401548 1.1283945709305017 0.7333610451136822 1.136300550180096 0.9988838900122564 1.1063710508149145 0.9582442579747695 0.9605708575621816 0.8544148444766468 1.0 10.233924425029057 -5.739317851228573 24.999990612272864 0.9901350651518077 0.8711449938605778 0.12524323333393905 0.11699958798690024 305.4218446736858 345158.03368988103 0.013108766426724153 0.050687262472946845 1.8225613188072254e-06 5.739317851228573 -0.11899007129122996 SSRFS(ph)GGFGAR ddPTM_A549_PD325901_60min_R1 1 SSRFSGGFGAR 11 1 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8Y7T2;A0A087WVZ1 A0A2R8Y645 DDX3X ATP-dependent RNA helicase DDX3X 1 S(0.02)S(0.005)RFS(0.975)GGFGAR 69.846 0.0027841 27201000.0 5622.8 6110.1 6758.2 6598.8 8033.0 7893.4 6977.6 6522.0 7688.3 7633.4 10529.0 True False 6193.622516713418 6625.019570397817 7216.852092358008 7006.392889037848 7468.789792345553 7829.118767448426 7243.13638628923 6391.913593589976 7365.187487783447 7151.425821275809 9233.999748830183 0.6707410315338228 0.7174593622051065 0.7815521213623902 0.7587603508355585 0.808835823640968 0.8478578059784184 0.784398590351579 0.6922150495401238 0.7976161672211992 0.7744667550139139 1.0 13.172739977807277 -14.999999999999998 0.18482800625780743 2.0485036057123343 0.7177184604717667 0.0 0.08544330683930274 17.84588041592414 0.20127371851851547 6.71538745426853 0.05582074496910462 1.000000000000004e-15 14.999999999999998 -1.3307851452405677 SSRGS(ph)LNGGNR ddPTM_A549_PD325901_60min_R1 2 SSRGSLNGGNR 11 1 Q2LD37-7;Q2LD37-4;Q2LD37;Q2LD37-2;Q2LD37-6;H7C0G8;H7C070 Q2LD37-7 KIAA1109 Uncharacterized protein KIAA1109 1 S(0.033)S(0.033)RGS(0.935)LNGGNR;S(0.153)S(0.153)RGS(0.694)LNGGNR 55.31399999999999 0.0048169 9188700.0 996.1399999999999 948.04 1304.65 1403.3200000000002 1292.02 1123.63 1073.95 1373.69 1500.56 1535.74 1792.4 True False 1097.267399480491 1027.9346579466699 1393.1913944977773 1489.9998892290412 1201.2729724270262 1114.4795298183396 1114.8197549379893 1346.2906753110426 1437.4966815379635 1438.7731143089716 1571.9461629597515 0.6980311573867721 0.6539248494434534 0.8862844207556038 0.9478695418064337 0.7641947292680811 0.7089807247087476 0.7091971603142833 0.8564483358489634 0.9144694108552428 0.9152814187986985 1.0 10.618336092741417 -8.802865310976923 1.5681393776111519 0.968817598355946 0.7723402155594542 0.45287964772978107 0.08420042294359734 0.22916057204880652 1.1089104913275507 0.01790831702798283 0.01891460895565131 1.574471084096915e-09 8.802865310976923 -0.19647738279649185 SSRPPSGEFLDDDSADITFDMS(ph)GSPR ddPTM_A549_MK2206_60min_R1 1 SSRPPSGEFLDDDSADITFDMSGSPR 26 1 A0A1B0GV68 A0A1B0GV68 1 SSRPPSGEFLDDDS(0.002)ADIT(0.062)FDMS(0.468)GS(0.468)PR 41.482 0.017713999999999997 1002400.0 900.26 803.1 694.36 486.11 927.08 721.35 761.37 666.72 908.27 1035.6 1085.6 True False 1052.2018787561947 843.9743596825541 792.8306890130702 605.2069718223074 790.7077600954497 797.682778206623 899.7010736670894 761.2296017443668 702.5482952091496 801.6572407445631 816.0155589642209 1.2894385005253677 1.0342625828774903 0.9715877109248021 0.7416610690493506 0.9689861319545245 0.9775337852860698 1.1025538223916853 0.9328616266957035 0.8609496320154768 0.9824043572920558 1.0 9.672452850092236 -5.281354018833094 2.1685876685945185 0.9385993194820772 1.3729631873598986 0.5683601977827877 0.08563978402014935 0.3521520350867033 1.906719688549809 0.012691658435330275 0.28984845300805073 5.231737931603227e-06 5.281354018833094 0.43436386787782144 SSRS(ph)SPELTR ddPTM_A549_PD325901_60min_R1 1 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.008)S(0.008)RS(0.492)S(0.492)PELTR 65.395 0.0046376 15431000.0 802.19 616.57 701.2 473.45 684.28 868.11 632.32 899.52 567.33 822.53 589.71 True False 883.6277382589338 668.5305177526035 748.7876486581386 502.69393121703513 636.2185334378457 861.0403999809537 656.3832836187805 881.5783679402117 543.4870930432191 770.5953154261518 517.1794084796895 1.7085516626743953 1.2926472067359152 1.447829585596397 0.971991388239458 1.2301698849690978 1.6648775760660783 1.2691597400374028 1.704589071965793 1.050867617952664 1.4899961266660027 1.0 9.014521025101494 -8.898850833452297 10.64279910688715 1.0224155920973559 1.391447299077011 0.05153178198931918 0.25626379481768213 0.26028291271320536 25.508400719413494 0.03587456413566117 0.038160733753017165 1.2622610072525063e-09 8.898850833452297 0.36903170697965515 SSRSS(ph)PELTR ddPTM_A549_MK2206_60min_R1 2 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSRS(0.041)S(0.959)PELTR;SSRS(0.152)S(0.848)PELTR 127.71 4.2976000000000006e-07 173385000.0 3201.7 3834.6000000000004 3937.7 3068.0 4693.2 3169.9 3223.6000000000004 3125.2 6286.6 6590.1 7756.4 True False 3742.068685950401 4029.764761099144 4496.1250707511435 3819.6601377277534 4002.8364970444445 3505.336713990677 3809.286393045732 3568.2066705235998 4862.695137637313 5101.391832976778 5830.271814250262 0.6418343441216743 0.6911795692354608 0.7711690319071888 0.655142720514642 0.6865608713577938 0.6012304101196425 0.6533634304553575 0.6120137764078586 0.8340426128593159 0.8749835334448787 1.0 12.509347429825358 -9.26140101150667 1.1185156367329303 0.9591420591215254 0.6661271689955983 0.7497373694292055 0.060254645862933574 0.12330737631442508 0.32218583339750445 0.014983669429397111 0.012597664386981825 5.477709398517333e-10 9.26140101150667 -0.2930148901259271 SSRSS(ph)PELTR ddPTM_A549_PD325901_60min_R1 2 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSRS(0.192)S(0.808)PELTR;SSRS(0.177)S(0.823)PELTR 134.04 2.2531999999999996e-07 312780000.0 3706.0 3381.2 2983.5 3561.0 3581.2 3751.2 3387.1000000000004 3303.7 2847.7 3194.0 3596.8 True False 4082.2303917869963 3666.1455903224305 3185.978251242951 3780.954882382218 3329.6688664693033 3720.6514709063954 3515.9979439922367 3237.805111797486 2728.0210721435046 2992.33029490855 3154.41640199377 1.2941317415185882 1.1622262641055312 1.0100056064979983 1.1986226295274272 1.0555578091607576 1.179505492221868 1.114627080232631 1.0264355427999328 0.8648259216567733 0.9486161348315422 1.0 11.623157401809838 -8.404240284304926 2.954173131639635 0.9363882304665723 1.141278661169683 0.5903605861714436 0.07623276870614323 0.14384207607787894 2.4188969764084725 0.013830961328420837 0.016819301950912677 3.9423911905153465e-09 8.404240284304926 0.20489043070311075 SSS(ph)ADSLSTTK ddPTM_A549_MK2206_60min_R1 2 SSSADSLSTTK 11 0 Q9UQ84;Q9UQ84-4;H0YAZ2 Q9UQ84 EXO1 Exonuclease 1 1 SS(0.001)S(0.999)ADSLSTTK;SS(0.002)S(0.998)ADSLSTTK 209.19 8.1097e-31 12569100.0 5640.6 7236.6 5740.2 6224.3 8580.0 6856.4 6130.3 5878.799999999999 9678.0 9186.400000000001 10023.4 True False 6592.595380570273 7604.9120299822835 6554.2466747405115 7749.253779419448 7317.893365857276 7581.939697090025 7244.096158111505 6712.137903069924 7485.948452590255 7111.185859768113 7534.313148233215 0.875009473440353 1.0093703142356945 0.8699195992772709 1.0285282316990814 0.971275446332266 1.0063212860840511 0.9614806307606467 0.8908758862304402 0.9935807425718294 0.9438399652177552 1.0 12.879260281846303 -2.0000000000000004 0.27667617694229146 0.9937158521815115 0.4014920458588426 0.06190659728673942 0.052650115244452844 56.14184968211728 0.6969300061471722 0.01826832174096226 16.280374706490466 0.00999999999999999 2.0000000000000004 -0.5922238063226688 SSS(ph)ALDSPAGPR ddPTM_A549_MK2206_60min_R1 1 SSSALDSPAGPR 12 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 SS(0.007)S(0.993)ALDSPAGPR 162.23 4.244e-14 5317400.0 2457.2 2699.0 2150.8 2334.8 3083.2 2420.9 2033.4 2133.8 3485.9 3747.6 3343.5 True False 2871.915287227823 2836.367571638916 2455.8157813372186 2906.826104813156 2629.6653642903416 2677.0780311366393 2402.8424592440724 2436.272684488435 2696.3492158384365 2901.0145571787625 2513.216674094395 1.1427249058271827 1.1285805958855357 0.9771603883784274 1.1566157963123467 1.0463345207742216 1.065199852735057 0.9560824914190519 0.9693842594635476 1.0728677887711497 1.154303402122742 1.0 11.295319341541655 -7.1730958374411555 2.4027297192221497 1.0244794179322174 1.0940109388545096 0.1480833645040348 0.0679505072684054 0.3443237178783076 3.883778009530854 0.008753119971164383 0.01621133131791083 6.712807024740764e-08 7.1730958374411555 0.0695315209222922 SSS(ph)ALDSPAGPR ddPTM_A549_PD325901_60min_R1 2 SSSALDSPAGPR 12 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.128)S(0.002)S(0.87)ALDSPAGPR;S(0.016)S(0.016)S(0.969)ALDSPAGPR 147.24 6.013e-12 11653000.0 7737.8 7532.0 7641.3 8070.3 9513.4 9041.400000000001 8499.9 8451.4 9639.5 8650.599999999999 10919.8 True False 8523.33575973271 8166.748073556302 8159.884568869702 8568.784102018879 8845.2116034483 8967.769836066615 8823.368345823754 8282.830197004962 9234.385337264226 8104.399639679365 9576.7338263155 0.8900044539519099 0.8527696625665049 0.8520529772319141 0.8947501577701868 0.9236146439763127 0.9364121420420458 0.9213337768225733 0.8648909270345307 0.9642520617926595 0.8462592556775076 1.0 13.225317989055421 -8.429120363257335 0.25394361432486406 1.0211044928763178 0.8441661435432339 0.0 0.054312600252811156 0.7042244207190721 0.15786832332170764 0.037232720506776715 0.04436301787794302 3.7228851344407156e-09 8.429120363257335 -0.17693834933308383 SSS(ph)APNVHINTIEPVNIDDLIR ddPTM_A549_PD325901_60min_R1 1 SSSAPNVHINTIEPVNIDDLIR 22 0 H7C560;P15056;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.166)S(0.196)S(0.638)APNVHINTIEPVNIDDLIR 105.37 1.7291e-10 7773100.0 2048.7 1973.8 1172.7 1792.4 2255.1 2145.2 2079.6 2040.5 1937.8 1793.7 1888.0 True False 2256.6825158267707 2140.139053051701 1252.2864740179687 1903.1124771642487 2096.709555672659 2127.7302024387923 2158.7403160007834 1999.800626758717 1856.3610048810215 1680.4454758852428 1655.787969018082 1.362905491555801 1.2925199923519493 0.7563084751489054 1.1493696733965493 1.2662910921596156 1.2850257655275645 1.3037540774504859 1.2077637138193738 1.1211344928311584 1.014891705537505 1.0 10.693302225838115 -9.559314058816032 1.0164652980604196 1.0235120422551682 1.19475254970891 0.18309060105260788 0.1541228598853539 0.6064966664751373 1.3090067288272835 0.0464208953110097 0.0325726642432225 2.7585822738532757e-10 9.559314058816032 0.17124050745374175 SSS(ph)ASSPEMK ddPTM_A549_MK2206_60min_R1 4 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.029)S(0.091)S(0.82)AS(0.055)S(0.006)PEMK;S(0.01)S(0.001)S(0.989)ASSPEMK;S(0.001)S(0.003)S(0.943)AS(0.053)SPEMK;S(0.04)S(0.022)S(0.916)AS(0.022)S(0.001)PEMK 194.17 8.0879e-16 103983600.0 23272.5 23751.7 21619.0 17039.2 27492.199999999997 21400.9 19762.8 21659.4 30999.5 29920.6 32774.2 True False 27200.329042002897 24960.56007828679 24684.89928246668 21213.804764918747 23448.133798697105 23665.529033232306 23353.444946173287 24729.686279130583 23978.162746029313 23161.51567924082 24635.461618096142 1.1041128217391598 1.0131963616201065 1.002006768338135 0.861108474189743 0.9518041172596954 0.9606286011644545 0.9479605175743433 1.0038247572744985 0.9733189951032212 0.9401697454789065 1.0 14.588448884603181 -5.316788326991104 2.0414862439166543 0.9738470506824922 1.1310444800203945 0.5153234926074369 0.03975948195329539 0.4274384063818084 2.0947156698706095 0.005712861885647028 0.1187722448355874 4.821827538809278e-06 5.316788326991104 0.15719742933790226 SSS(ph)ASSPEMK ddPTM_A549_PD325901_60min_R1 4 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.025)S(0.032)S(0.939)AS(0.002)S(0.001)PEMK;S(0.092)S(0.022)S(0.884)AS(0.001)SPEMK;S(0.004)S(0.007)S(0.922)AS(0.067)SPEMK;SSS(0.498)AS(0.498)S(0.004)PEMK 187.85 3.2072e-14 165013000.0 34537.3 33915.8 33177.3 32862.9 38849.4 35675.6 34557.1 37529.2 38633.1 42714.8 49469.1 True False 38043.50127098353 36774.003493510434 35428.91108931213 34892.76669593898 36120.75216715416 35385.069741807485 35872.1893508707 36780.65066491216 37009.4851572242 40017.78023824665 43384.714310462085 0.8768872142096706 0.847625807337459 0.8166219750989248 0.8042640651323756 0.8325686302478142 0.8156114498897251 0.8268393585392411 0.8477790219317549 0.853053563805524 0.9223935405423769 1.0 15.404899208557474 -10.421280335357851 0.5576682638958378 1.016396768031526 0.8287804963514677 0.7224777567687746 0.028817108396811748 0.22584704071488582 0.11398989551355582 0.02106983725345614 0.004686052606418508 3.7907021766872096e-11 10.421280335357851 -0.18761627168005834 SSS(ph)DEQGLSYSSLK ddPTM_A549_PD325901_60min_R1 1 SSSDEQGLSYSSLK 14 0 Q9NPH3 Q9NPH3 IL1RAP Interleukin-1 receptor accessory protein 1 SS(0.026)S(0.974)DEQGLSYSSLK 200.77 1.9539e-31 4860500.0 3303.0 3625.7 3220.2 3998.1 4418.4 4324.4 3528.1 4289.4 3362.2 3562.4 4471.8 True False 3638.3181284599164 3931.2504633952544 3438.7421366356807 4245.053556656096 4108.066826652509 4289.183520150251 3662.3637761503996 4203.844552030796 3220.89842636545 3337.4694560370117 3921.796949075775 0.9277171091984595 1.0024105058069637 0.876828194138421 1.082425635946425 1.047496053466162 1.09367812149506 0.9338483923838754 1.0719179515455255 0.8212812820726221 0.8510051640545877 1.0 11.937299126631519 -8.750477242247431 24.99898362458469 0.915605044369839 1.0048550835435484 0.2801835792116937 0.07851122693213589 275.13259783640734 627435.1347946379 0.014974245538747159 0.016899288457121926 1.7763263483022204e-09 8.750477242247431 0.08925003917370933 SSS(ph)DMDLQKK ddPTM_A549_PD325901_60min_R1 1 SSSDMDLQKK 10 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-2;Q5HYK7;Q5HYK7-3 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 S(0.139)S(0.139)S(0.722)DMDLQKK 46.378 0.0095249 12800000.0 3100.4 3280.9 2894.7 3073.7 4297.6 4205.4 3375.4 3609.2 4397.8 4070.1 4233.9 True False 3415.150325606153 3557.3929573195533 3091.151749245172 3263.555468120818 3995.7514019151317 4171.152616695927 3503.8526940897546 3537.2116746373717 4212.975759761459 3813.1131913923896 3713.1571409034236 0.9197430100615767 0.9580507428926177 0.8324861113992834 0.8789166050017436 1.0761061948870152 1.1233439519020925 0.943631675452673 0.9526156692029351 1.134607451258157 1.0269194237399406 1.0 11.858430656037049 -6.760204757453648 24.99262824083831 1.0524926558668244 0.8970089985594903 0.5078271681163873 0.06487009479925136 21.351366617336197 432200.7411287432 0.010750281335058046 0.021441683722990178 1.7369816983681464e-07 6.760204757453648 -0.15548365730733404 SSS(ph)DPPAVHPPLPPLR ddPTM_A549_PD325901_60min_R1 1 SSSDPPAVHPPLPPLR 16 0 O43150 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 S(0.142)S(0.142)S(0.716)DPPAVHPPLPPLR 120.9 2.8732000000000002e-08 9960700.0 549.46 652.34 728.47 613.95 934.23 927.2 812.29 658.35 791.96 1005.5 708.44 True False 605.2407747089268 707.314981187429 777.9083548459708 651.8722971183834 868.612907718535 919.6491906121807 843.202140452143 645.2186927844165 758.6766753150862 942.0125584002965 621.3063711711706 0.9741422312603041 1.1384318816079917 1.2520527568059596 1.0491962216476158 1.3980428143384211 1.4801863191562483 1.3571438819510189 1.0384871662722062 1.2210991396804298 1.5161804258092357 1.0 9.279161038211596 -10.559535923947942 0.6899185821120885 0.987816320343167 1.2223923510875823 0.0 0.2142684230501237 1.0602029591465514 0.8302085991994214 0.1410561272076354 0.03194174715835477 2.7571733751922965e-11 10.559535923947942 0.23457603074441524 SSS(ph)DSWEPTSAGSK ddPTM_A549_PD325901_60min_R1 2 SSSDSWEPTSAGSK 14 0 Q8IX21;Q8IX21-2;A0A3B3IRS8;B1AL16 Q8IX21 FAM178A Protein FAM178A 1 S(0.001)S(0.1)S(0.898)DSWEPTSAGSK;SS(0.005)S(0.995)DSWEPTSAGSK 174.95 7.646099999999998e-43 6567300.0 5050.3 4784.1 3860.9 4427.8 4558.4 4528.5 3377.1 4074.3 5123.4 5582.8 6095.7 True False 5563.002738165643 5187.272896800413 4122.923891477767 4701.2951497365875 4238.233709626292 4491.62139741939 3505.617388520029 3993.034890273481 4908.08131510343 5230.301055233394 5345.967543826021 1.0405979259246108 0.9703150747316298 0.7712212724222898 0.8794095944645313 0.7927907670372907 0.8401886769040895 0.6557498450525789 0.7469246413373717 0.91809036902435 0.9783637877251596 1.0 12.384235363450825 -9.102023589259208 2.7146629383660836 0.9693582376759121 0.8337432964652023 0.24588398502636422 0.1006667417020205 0.2636274579447886 4.0312479635159955 0.020509691954096316 0.01996412824185014 7.906356824470918e-10 9.102023589259208 -0.13561494121070983 SSS(ph)DTNESEIK ddPTM_A549_MK2206_60min_R1 2 SSSDTNESEIK 11 0 H0YAV1;Q7LG56-5;Q7LG56;Q7LG56-6 H0YAV1 RRM2B Ribonucleoside-diphosphate reductase subunit M2 B 1 SS(0.011)S(0.988)DTNESEIK;SS(0.018)S(0.981)DTNESEIK 154.36 8.0589e-24 4477000.0 2526.1 2547.4 2038.9 2476.7 2806.7 2784.7 1780.5 2497.7 3466.6 3407.8 2876.7 True False 2952.4439227845555 2677.051779174871 2328.0466787095284 3083.4916111832895 2393.8381480130083 3079.3751056657434 2103.9938028346946 2851.7566238854456 2681.4206350226686 2637.975613180112 2162.3359971189902 1.3653955383059218 1.2380369113503487 1.0766350288814155 1.4260002216545486 1.1070611372157066 1.4240964909100988 0.9730189043876492 1.3188314062592548 1.2400573447398027 1.219965637484112 1.0 11.078375000016942 -10.90273036926399 0.5109635813362148 0.9341084959820644 1.2449761008272167 0.016946793311437003 0.15194795415353168 1.590132960020892 0.5007833169229856 0.2505379778621345 0.029149785448944313 1.2510354916849479e-11 10.90273036926399 0.3108676048451523 SSS(ph)EDAESLAPR ddPTM_A549_MK2206_60min_R1 1 SSSEDAESLAPR 12 0 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 S(0.453)S(0.037)S(0.51)EDAESLAPR 237.02 1.8531999999999997e-50 146140000.0 8131.8 7568.6 7991.2 6570.1 9466.1 7188.4 7580.3 8220.6 11520.0 11307.0 10598.0 True False 9504.249036577898 7953.809411895632 9124.47232277384 8179.7747949429995 8073.649229666849 7949.071716726264 8957.542389007493 9385.89522453165 8910.738393659816 8752.740846947449 7966.224110079973 1.1930682472957046 0.9984415831123014 1.1453948817769626 1.0268070144540389 1.0134850737441528 0.9978468603046197 1.1244401695494817 1.178211294941516 1.1185648646746849 1.0987314348679025 1.0 12.959680351604081 -10.897334995765828 1.2162954608834335 1.0011839646982605 1.0871123409531105 0.0 0.07327655923529003 0.6386783144641752 1.714366882170898 0.04423996416466702 0.011196975635734453 1.2666744316833577e-11 10.897334995765828 0.08592837625484995 SSS(ph)EDAESLAPR ddPTM_A549_PD325901_60min_R1 2 SSSEDAESLAPR 12 0 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 S(0.021)S(0.002)S(0.977)EDAESLAPR;S(0.001)SS(0.999)EDAESLAPR 291.5 8.998499999999999e-110 316370000.0 17156.4 18304.5 17425.0 18237.699999999997 19300.6 19825.1 17716.800000000003 19060.5 20220.2 22823.0 22404.0 True False 18898.10509812585 19847.08445464834 18607.565285037184 19364.201308178104 17944.99243945532 19663.650958590948 18391.02251900495 18680.323374827025 19370.41531163962 21381.951885002443 19648.450030657375 0.9618114949850616 1.0101094195054081 0.947024587486743 0.9855332750402317 0.9133032077062486 1.0007736451429936 0.9360037300809749 0.9507275813451042 0.9858495342592448 1.0882258830411708 1.0 14.262127889423633 -8.942582563384054 4.3190221095894 0.9940514690898221 0.9636553014371227 0.24754785502248244 0.038947053204224556 0.2299537722562158 8.221798134092131 0.0044591768184086234 0.004639363501229507 1.1413463035400558e-09 8.942582563384054 -0.03039616765269937 SSS(ph)EDKITVHFINR ddPTM_A549_MK2206_60min_R1 2 SSSEDKITVHFINR 14 1 P10109 P10109 FDX1 Adrenodoxin, mitochondrial 1 S(0.024)S(0.141)S(0.835)EDKITVHFINR;S(0.022)S(0.122)S(0.856)EDKITVHFINR 129.88 2.8531e-09 24391000.0 5910.6 7017.8 5804.799999999999 6193.2 7945.200000000001 7027.3 5351.9 6322.1 9380.099999999999 9556.099999999999 11011.5 True False 6908.164779704047 7374.976044552648 6628.00792612343 7710.534278023315 6776.471604942799 7770.924221655785 6324.270953884309 7218.277035619238 7255.522326941711 7397.370373000308 8277.040648060543 0.8346177182689989 0.8910160476595865 0.8007702520678679 0.9315568940488446 0.81870705884846 0.938852973191167 0.7640739272394654 0.8720842801841994 0.8765841120572252 0.8937216437053069 1.0 13.014899327082448 -10.35052252826713 0.6284708017255569 1.0066601091421876 0.8563154616407294 0.1800288225704898 0.05864159390830627 0.481710428571547 0.3317979285859649 0.03751356389667329 0.009941588876976293 4.461464809118395e-11 10.35052252826713 -0.15034464750145826 SSS(ph)EDKITVHFINR ddPTM_A549_PD325901_60min_R1 3 SSSEDKITVHFINR 14 1 P10109 P10109 FDX1 Adrenodoxin, mitochondrial 1 S(0.01)S(0.157)S(0.832)EDKITVHFINR;S(0.299)S(0.299)S(0.402)EDKITVHFINR;S(0.001)S(0.028)S(0.971)EDKITVHFINR 177.44 1.4047999999999998e-23 47883700.0 8805.26 9443.08 9348.77 10963.130000000001 10202.8 12946.369999999999 9440.02 11492.21 12128.8 13012.14 13603.6 True False 9699.163513110194 10238.881492092141 9983.233750920916 11640.297641025267 9486.190525749185 12840.939055075296 9799.265126877155 11262.988856085662 11619.068715038156 12190.551259734295 11930.443440325414 0.8129759435702618 0.8582146626238786 0.8367864782944407 0.9756802166867123 0.7951247221612443 1.0763169968747655 0.8213663788686358 0.9440545032899844 0.9739008254936444 1.0218020244352113 1.0 13.542360046829774 -2.0000000000712252 0.14930711874803052 1.025003974809012 0.2529925890249814 0.38635838811785694 0.07291344813612027 43.28005374650379 0.40382667003132805 0.11719859322418796 7.2921942053294035 0.009999999998359979 2.0000000000712252 -0.7720113857840307 SSS(ph)EITLSECDAEDAGEPR ddPTM_A549_MK2206_60min_R1 2 SSSEITLSECDAEDAGEPR 19 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(0.089)S(0.089)S(0.822)EITLSECDAEDAGEPR;S(0.079)S(0.079)S(0.842)EITLSECDAEDAGEPR 219.95 4.7601e-67 185253000.0 1568.2 1810.48 1261.4 1528.72 2220.96 1323.3400000000001 1932.54 1943.8799999999999 2175.7 2188.32 2172.98 True False 1832.8738211910595 1902.6256988146827 1440.2854875296475 1903.2564686268483 1894.2597260879213 1463.374960438002 2283.65750279706 2219.4309428828287 1682.907423878964 1693.976992145755 1633.3690948029418 1.1221430765544067 1.1648473727514879 0.8817881347898352 1.1652335498955104 1.1597254607761847 0.8959242372677262 1.3981270430934487 1.3588055204084735 1.0303289251851546 1.0371060634951743 1.0 10.67363512030963 -8.967494088370476 24.999883678386748 1.013380214718712 1.140455111372597 0.11565338455887897 0.14876254879514625 275.5940793505 211957.46712428852 0.026072926195589066 0.027564338001594545 1.0777199235504287e-09 8.967494088370476 0.12707489665388483 SSS(ph)EITLSECDAEDAGEPR ddPTM_A549_PD325901_60min_R1 3 SSSEITLSECDAEDAGEPR 19 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(0.004)S(0.005)S(0.991)EITLSECDAEDAGEPR;S(0.12)S(0.12)S(0.76)EITLSECDAEDAGEPR;S(0.001)S(0.001)S(0.997)EIT(0.002)LSECDAEDAGEPR 246.69 7.452199999999999e-86 263514300.0 3129.48 3433.56 3303.74 2710.81 3788.2599999999998 3018.51 2923.89 3340.43 3022.51 2989.8199999999997 3485.79 True False 3447.182505798587 3722.9181512798696 3527.951663402511 2878.2505770038038 3522.185686387524 2993.9282553438006 3035.1602339640012 3273.8025031333586 2895.484415761656 2801.042254954128 3057.0599282434005 1.1276136506029677 1.2178100000215155 1.1540341852014941 0.9415093732420413 1.1521480667902335 0.9793488926022214 0.9928363542771689 1.0708990271625127 0.9471467631403004 0.9162536295333991 1.0 11.57792911864429 -6.259268335839366 0.6059259571045675 0.9803795730177718 1.2174665751403169 0.5085600691183494 0.06902498333199654 0.7982085887741925 0.37669793438604293 0.011793377055667588 0.10518031417858331 5.504674761162864e-07 6.259268335839366 0.23708700212254508 SSS(ph)ESTSSTVNGVPSR ddPTM_A549_MK2206_60min_R1 1 SSSESTSSTVNGVPSR 16 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 S(0.363)S(0.264)S(0.372)ES(0.001)TSSTVNGVPSR 71.08 0.0012263 2908500.0 693.99 705.43 603.8 764.01 1081.2 752.4 813.34 868.11 1035.0 1390.3 968.9 True False 811.1185455735139 741.333373864854 689.4279192725558 951.1924842977126 922.1569122569792 832.0184685973009 961.1133499565126 991.1672509753757 800.5741525553747 1076.2302643947153 728.2953897203702 1.113721927973406 1.0179020550294706 0.9466322717452081 1.3060531450884565 1.2661852941442377 1.1424189694743987 1.3196751805960671 1.3609412677401893 1.0992437462260416 1.4777386752481505 1.0 9.508379902355756 -9.247739756664433 2.3547578679455117 1.0339954376863747 1.181053622982134 0.0 0.18186454647858807 0.3264000695169859 3.726844817023137 0.02698295401224881 0.024829980225160933 5.652756048146123e-10 9.247739756664433 0.1470581852957593 SSS(ph)ESTSSTVNGVPSR ddPTM_A549_PD325901_60min_R1 2 SSSESTSSTVNGVPSR 16 0 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 S(0.002)S(0.038)S(0.947)ES(0.009)T(0.002)S(0.001)S(0.001)T(0.001)VNGVPSR;S(0.022)S(0.022)S(0.949)ES(0.007)TSSTVNGVPSR 90.561 1.0404e-05 6375500.0 1645.35 2040.62 1903.8899999999999 2310.1000000000004 2346.8999999999996 1871.04 1989.3200000000002 2049.79 2587.1 2300.6 2571.8 True False 1812.3847207573483 2212.5902089565134 2033.0994244206263 2452.7896303822445 2182.061840365465 1855.8028705813354 2065.024661197674 2008.9053304208535 2478.3731838825934 2155.3397233771484 2255.4849039834257 0.8035454892899014 0.980982051819032 0.9014023640016198 1.0874777419482426 0.9674468831565718 0.8227955182957734 0.9155568532294858 0.8906755823871458 1.0988205593863756 0.9555992680645256 1.0 11.139221914757867 -8.756606137440821 24.999702906838163 1.0466652654226094 0.9261769578719196 0.19950591401647588 0.08069511762692706 103.84152138360672 537114.0833452909 0.01352406370661656 0.015097966671127937 1.7514343480037613e-09 8.756606137440821 -0.12048830755068984 SSS(ph)ESYTQSFQSR ddPTM_A549_MK2206_60min_R1 2 SSSESYTQSFQSR 13 0 Q9BTU6;E9PAM4 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 SSS(1)ESYTQSFQSR;S(0.022)S(0.003)S(0.974)ESYTQSFQSR 330.57 3.3560999999999996e-178 137326000.0 18518.199999999997 23139.0 18825.8 20224.0 31654.0 25360.0 23935.0 26848.0 39702.0 38499.0 39499.0 True False 21643.61943347807 24316.676265340084 21495.581521433043 25178.88090788985 26997.738531800253 28043.57836739441 28283.67968034172 30653.78621855166 30709.560391066174 29802.049161283263 29690.308183058023 0.7289792783568485 0.8190105712414175 0.7239932098009989 0.8480505070087989 0.9093114953655411 0.9445364525854509 0.9526233108109347 1.0324509274054428 1.0343294586813943 1.0037635506353215 1.0 14.857704448012514 -6.933846908155702 0.8498480415505035 1.017098684869125 0.7477619071103034 0.9156233448147959 0.031556537140181216 0.11830576062767012 0.16125643935395167 0.005347080249725507 0.01725476972349559 1.1645364643193801e-07 6.933846908155702 -0.2693367777588216 SSS(ph)ESYTQSFQSR ddPTM_A549_PD325901_60min_R1 2 SSSESYTQSFQSR 13 0 Q9BTU6;E9PAM4 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 1 S(0.001)S(0.003)S(0.995)ESYTQSFQSR;S(0.002)S(0.003)S(0.971)ES(0.024)YTQSFQSR 320.48 8.508699999999998e-156 165317000.0 34765.0 38163.0 36811.0 37341.0 43840.0 41777.0 38005.0 38836.0 42581.0 44002.0 46964.0 True False 38294.31720735965 41379.12994306016 39309.21582252532 39647.46876243597 40760.82963978952 41436.78196312022 39451.301072133996 38061.38551374737 40791.46864941622 41223.70621057171 41187.72572932482 0.9297507092044871 1.0046471178086696 0.9543915117055848 0.9626039811712106 0.9896353566025774 1.006046855692692 0.9578412105440791 0.9240953424784133 0.9903792435029626 1.0008735729057572 1.0 15.329926846381765 -8.920678165559993 0.0048980988870225214 1.9659458388481046 1.3297237920699802e-08 0.14834454255758855 0.026539819342595545 5228.555964881755 18.672654292497565 3759.671820358336 3733.896518181335 1.2003885229661572e-09 8.920678165559993 -1.9659458255508666 SSS(ph)FAGGR ddPTM_A549_MK2206_60min_R1 2 SSSFAGGR 8 0 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.084)S(0.047)S(0.869)FAGGR;S(0.001)S(0.101)S(0.897)FAGGR 130.56 0.0010706 9534600.0 2740.5 2143.79 2367.7 2170.7 2791.4 2170.09 2757.2 3211.8999999999996 3589.9 4412.4 4706.9 True False 3203.029401207819 2252.8997541325643 2703.475462838075 2702.521597446425 2380.7887577452216 2399.7274834108407 3258.147550225117 3667.196661031213 2776.7933818923075 3415.63577545511 3538.046826168655 0.9053100647275417 0.6367636904829284 0.7641152295787064 0.7638456273268098 0.6729104714318814 0.6782633473535741 0.9208887587712793 1.036503144590207 0.784837939779133 0.9654015176373163 1.0 11.78873742693417 -7.769928302991315 24.984376573655886 0.909903689664887 0.7318754672077892 0.546483460869694 0.09071701384820804 137.5131960370532 404724.92609632656 0.016013096801317492 0.02231625111597833 1.6985240360402365e-08 7.769928302991315 -0.17802822245709782 SSS(ph)FGR ddPTM_A549_MK2206_60min_R1 1 SSSFGR 6 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 S(0.001)S(0.002)S(0.997)FGR 85.81299999999999 0.039698000000000004 8031200.0 1106.6 1767.0 1350.3 1555.6 1726.8 1562.6 1202.2 1294.6 1680.1 2294.8 2008.5 True False 1293.3670262275389 1856.9327525327762 1541.7928443089295 1936.7220698335382 1472.7900074781287 1727.9532948300678 1420.6241784711435 1478.113514546222 1299.5600325683915 1776.403086192184 1509.7340182200064 0.8566853569030877 1.2299734457345812 1.0212347510899442 1.2828233625661793 0.9755294573110069 1.144541537765271 0.9409764642821492 0.9790555797960587 0.8607874081691473 1.176633145146046 1.0 10.560078685606213 -7.774919518911176 24.06192650110452 0.9371209941550015 1.0928147523381992 0.04182345392430997 0.1352264455902962 132.13402395623737 235857.5702389985 0.01687876337320877 0.023399465347095385 1.6791151537708644e-08 7.774919518911176 0.15569375818319775 SSS(ph)FGR ddPTM_A549_PD325901_60min_R1 1 SSSFGR 6 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 S(0.004)S(0.017)S(0.979)FGR 86.87200000000001 0.039089 8844800.0 2598.7 2558.9 3105.1 2896.1 2908.7 3124.1 3214.9 2719.0 2719.7 3436.1 3251.3 True False 2862.5181109381706 2774.547483460332 3315.8307584831527 3074.985519479682 2704.4029464702508 3098.658365392054 3337.244778760784 2664.767411985764 2605.400467011517 3219.144059591507 2851.41071168882 1.0038954048968878 0.973043789197606 1.162873782051295 1.0784084898307913 0.94844384759588 1.0867106421006587 1.1703837560406078 0.9345435229874297 0.913723321698684 1.1289654087344323 1.0 11.477460141910974 -8.309559548431563 24.99798365915994 0.9562662456778853 1.0584908791704566 0.061910278973936084 0.08582250871074033 356.0027118595036 184939.37372145086 0.011828851852094086 0.014300396193516009 4.9027579385526995e-09 8.309559548431563 0.10222463349257127 SSS(ph)FGSVSTSSNSSK ddPTM_A549_PD325901_60min_R1 2 SSSFGSVSTSSNSSK 15 0 E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768-2;P57768;E5RG30;E5RJ65;E5RHF1 E5RGS8 SNX16 Sorting nexin-16 1 SS(0.002)S(0.998)FGSVSTSSNSSK;SS(0.001)S(0.998)FGSVSTSSNSSK 246.77 2.4585999999999994e-65 19046800.0 8676.5 8901.9 10428.5 9655.2 11471.5 10247.7 10292.9 10999.5 10646.0 11812.2 10060.8 True False 9557.331892698294 9652.094354220771 11136.240721664864 10251.579775449825 10665.781414526587 10164.246128814111 10684.601941990995 10780.106343559179 10198.58564246225 11066.375676117337 8823.385380665854 1.083181962519816 1.0939218834723934 1.26212788416417 1.1618646736108214 1.2088082923248331 1.151966698755605 1.2109413202559998 1.2217653291197015 1.1558585738315126 1.2542097164163781 1.0 13.10711658384752 -10.325188134504685 0.7638256496862794 1.0017036802815134 1.1754638187558546 0.0 0.08964088898984188 0.3375858109894699 0.3666846584791653 0.03232582135302055 0.010478635025428016 4.729463362568482e-11 10.325188134504685 0.17376013847434124 SSS(ph)FSLPSR ddPTM_A549_PD325901_60min_R1 2 SSSFSLPSR 9 0 Q14153-2;Q14153 Q14153-2 FAM53B Protein FAM53B 1 S(0.168)S(0.115)S(0.716)FS(0.001)LPSR;S(0.056)S(0.078)S(0.842)FS(0.024)LPSR 106.37 0.00052997 43014000.0 4046.9 3823.0 4208.2 3973.1 4191.4 4540.0 3909.7000000000003 4155.5 4762.7 5253.9 4991.6 True False 4457.73830882968 4145.177626819668 4493.793757962321 4218.509363435215 3897.010523545023 4503.027745232203 4058.48577296993 4072.615292573315 4562.54028173539 4922.167857363816 4377.664844359463 1.0182913647611442 0.9468924127804461 1.0265275935302558 0.9636437492172758 0.8902030333743447 1.0286369343770727 0.9270891941851627 0.9303168326878202 1.042231519302839 1.1243820695195372 1.0 12.09594579014267 -8.770188065285984 24.99875479421632 1.0199426621372023 0.9659265409911427 0.3033890047688792 0.053109839003969865 189.2990625298199 540907.3083332157 0.0072715250740948015 0.007798000101144011 1.6975084104779311e-09 8.770188065285984 -0.05401612114605958 SSS(ph)FVLPK ddPTM_A549_MK2206_60min_R1 2 SSSFVLPK 8 0 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 SSS(1)FVLPK;SS(0.001)S(0.999)FVLPK 138.98 0.0010917 52654000.0 3823.3999999999996 4539.9 5128.4 3642.0 6499.200000000001 4788.5 4763.7 4488.8 7310.5 5905.9 6865.4 True False 4468.696446844726 4770.961518519274 5855.684235172859 4534.290163495591 5543.176289438181 5295.215891650952 5629.202627668427 5125.101146373461 5654.683422469629 4571.75308817431 5160.531704599265 0.8659372139622844 0.9245096807112354 1.1347056021289526 0.8786478648032442 1.074148286793372 1.0260988973154939 1.0908183400271458 0.9931343202107978 1.0957559697637274 0.8859073734785481 1.0 12.33330400303728 -5.57998367964434 7.152806836965611 1.0395801080051532 0.880002324861994 0.251794677071569 0.07958598671779611 0.11963048609333905 12.105865727099221 0.008474580114275265 0.03358190787279618 2.630366836613614e-06 5.57998367964434 -0.15957778314315918 SSS(ph)FVLPK ddPTM_A549_PD325901_60min_R1 2 SSSFVLPK 8 0 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 S(0.303)S(0.052)S(0.645)FVLPK;S(0.033)S(0.041)S(0.926)FVLPK 133.13 0.0010723 88777000.0 23978.0 25299.0 26259.0 26412.0 31216.0 29935.0 28788.0 30204.0 30399.0 30454.0 31118.0 True False 26412.228908329354 27431.03551684821 28041.093648194637 28043.409253995855 29023.495849353785 29691.219284917635 29883.543093398057 29601.557525420387 29121.43574537012 28531.129242687846 27290.683273254606 0.9678111992972285 1.0051428629392782 1.0274969434596548 1.0275817931417985 1.0634946570867783 1.0879617409218771 1.0950089740949984 1.0846763061601497 1.0670834238111468 1.0454530931678394 1.0 14.736120895180036 -5.4862405406589705 1.2259897961782336 1.0467829323222204 0.9510041812881711 0.4878507345042883 0.028036606683633118 1.0234648475572352 1.6827242729435063 0.0056464706875738084 0.11114531045834392 3.264069965769721e-06 5.4862405406589705 -0.09577875103404931 SSS(ph)GMGGR ddPTM_A549_MK2206_60min_R1 1 SSSGMGGR 8 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 S(0.002)S(0.058)S(0.94)GMGGR 111.39 0.0015201 10280000.0 2059.3 2089.7 1593.1 1663.4 2571.2 2679.1 2189.2 2494.8 2603.3 3597.9 3079.6 True False 2406.8594949488265 2196.056804169635 1819.0255352651668 2070.933074672863 2192.9798860480428 2962.600583757349 2586.949302536207 2848.44554000457 2013.6567066158527 2785.131891149928 2314.85032736387 1.0397473506158543 0.9486819852713693 0.7858069758387602 0.8946293633728027 0.9473527770347848 1.2798238178669337 1.117544953967802 1.2305095955159888 0.8698863519651339 1.2031585188151712 1.0 11.176703199983205 -5.240433025454917 20.06117037830127 0.9769792320452709 1.0397482225084873 0.0 0.16065601935762075 1553.1374440832683 1482877.9602665405 0.02135700308774364 0.8503279530179996 5.748664648057636e-06 5.240433025454917 0.06276899046321638 SSS(ph)GMGGR ddPTM_A549_PD325901_60min_R1 3 SSSGMGGR 8 0 P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 S(0.001)S(0.005)S(0.994)GMGGR;S(0.012)S(0.042)S(0.947)GMGGR;S(0.069)S(0.069)S(0.863)GMGGR 105.94 0.0019452999999999999 22612500.0 7546.700000000001 8353.0 7315.9 8068.0 8862.2 7127.1 6200.299999999999 6626.8 7886.9 8678.8 9856.1 True False 8312.835428413091 9056.936624856045 7812.4009680805475 8566.342036242564 8239.749644930263 7069.059260582478 6436.255809434347 6494.62327537597 7555.441020433549 8130.819086866722 8643.862182965635 0.9617038370643051 1.0477881799994975 0.9038090615878122 0.9910317697017614 0.953248613931889 0.8178125831891901 0.7446041680440262 0.7513566433503363 0.874081615429151 0.9406465437278765 1.0 13.077460354830693 -7.016752553356638 23.11274085645143 0.8988362222619326 0.9755547861189127 0.2557256647014303 0.08284382036408232 486.6064288945438 671351.7588552268 0.015262880593566718 0.026911070412004887 9.621603293966806e-08 7.016752553356638 0.07671856385698006 SSS(ph)KESLVR ddPTM_A549_PD325901_60min_R1 1 SSSKESLVR 9 1 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 SS(0.006)S(0.993)KESLVR 112.7 0.00022261 44178000.0 7871.0 7881.8 7983.6 9087.5 10621.0 8521.3 9613.0 9455.0 10004.0 8473.1 11752.0 True False 8670.058125676056 8546.026947179502 8525.415105286818 9648.814235790069 9875.01760046087 8451.90535802801 9978.827975435446 9266.412607695987 9583.56666984712 7938.107019971706 10306.578502065951 0.841215940279128 0.8291817643912044 0.8271818919904312 0.9361801526914064 0.9581276267853026 0.8200495786583131 0.9681998709305122 0.8990774781212346 0.9298494808850576 0.7701980844933665 1.0 13.331277857032555 -2.0000000011102688 0.06841711734805361 1.120163779842274 0.38423926137116393 0.0 0.08011675033570169 108.52773663364833 0.5340191571681125 1.01131249440435 7.711363868334221 0.009999999974435117 2.0000000011102688 -0.7359245184711102 SSS(ph)KGSVEEIMSQPK ddPTM_A549_MK2206_60min_R1 1 SSSKGSVEEIMSQPK 15 1 Q8IWB9;A0A087WVA8;Q8IWB9-2;J3KRZ8 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 S(0.146)S(0.146)S(0.56)KGS(0.146)VEEIMSQPK 47.082 0.006721899999999999 3828800.0 1120.5 1414.1 1273.5 1284.4 1967.7 1777.9 1516.0 1505.9 2240.1 2130.2 2218.0 True False 1309.6130064051677 1486.071649890549 1454.101449475984 1599.0780576589063 1678.253936596428 1966.0361979254953 1791.4375765781524 1719.365936625333 1732.7209267046323 1648.9863405118472 1667.2093863141506 0.7855120161603976 0.891352737148356 0.8721768611744063 0.9591345099094791 1.0066245729978132 1.1792377214670007 1.0745126504707632 1.0312837432054587 1.0392941288168454 0.9890697317614131 1.0 10.703219589722455 -6.370207394634349 1.7370348095311035 1.0359691733157854 0.8401352361942853 0.722490868716497 0.053510455244448446 0.16635635785543756 0.9604896956082749 0.008284797398714589 0.02666244294356463 4.2637585703256666e-07 6.370207394634349 -0.1958339371215001 SSS(ph)KSEGS(ph)PSQR ddPTM_A549_PD325901_60min_R1 1 SSSKSEGSPSQR 12 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 2 S(0.103)S(0.126)S(0.747)KS(0.025)EGS(0.606)PS(0.393)QR 65.219 0.01898 3224300.0 1045.7 1009.7 822.44 372.14 697.74 830.81 527.53 324.54 795.68 817.7 1128.5 True False 1151.8586941963463 1094.7909625424581 878.2557241334853 395.126242608739 648.733149472325 824.0441588141771 547.6054428254923 318.0667951032952 762.2403366517348 766.0702824504451 989.7016541509037 1.1638443659918527 1.106182815751393 0.887394418762459 0.3992377308369059 0.6554835457245887 0.8326187547106311 0.5533035541860343 0.32137644083880484 0.7701718325465312 0.7740416308667091 1.0 9.95084987966811 -5.825230057325574 3.9017728184087326 0.7734791399567736 1.142785297966386 0.3690254451987771 0.20568580951565762 0.22864536034554003 6.850124897349638 0.034406383516311104 0.12522411523808138 1.4954432702072696e-06 5.825230057325574 0.3693061580096123 SSS(ph)KSEGSPSQR ddPTM_A549_MK2206_60min_R1 4 SSSKSEGSPSQR 12 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 S(0.021)S(0.063)S(0.916)KSEGSPSQR;S(0.047)S(0.245)S(0.695)KS(0.012)EGSPSQR;S(0.001)S(0.006)S(0.991)KS(0.002)EGSPSQR;S(0.001)S(0.034)S(0.964)KSEGSPSQR 149.37 1.1595e-12 303873000.0 7990.169999999999 8314.71 8426.33 7474.6 11996.380000000001 10875.3 12407.41 12538.64 14747.720000000001 31709.98 31271.399999999998 True False 9338.715355098953 8737.893224002157 9621.310299774615 9305.877335547548 10231.72839350849 12026.11702756011 14661.675792883585 14316.030617974544 11407.384967269523 24546.673494462437 23505.848333266156 0.39729327028297606 0.37173273221694525 0.40931559513885996 0.39589625541732104 0.43528437044445034 0.5116223357291216 0.6237458689008027 0.6090412230608194 0.485299862635694 1.0442794127844037 1.0 14.520732128326605 -14.999999999998005 0.18114818278018774 3.292459026263766 0.34890155284674607 0.9396764015188838 0.05582283781937661 9.98489049949376 0.11132030820988432 8.097427858270331 0.07285594412299194 1.0000000000045932e-15 14.999999999998005 -2.9435574734170196 SSS(ph)KSEGSPSQR ddPTM_A549_PD325901_60min_R1 4 SSSKSEGSPSQR 12 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 S(0.011)S(0.177)S(0.803)KSEGS(0.009)PSQR;S(0.002)S(0.015)S(0.967)KS(0.015)EGSPSQR;S(0.088)S(0.088)S(0.819)KS(0.002)EGS(0.002)PSQR;SS(0.002)S(0.995)KS(0.002)EGSPSQR 141.55 3.0641e-12 995040000.0 17367.3 16245.630000000001 13564.01 14241.46 13805.5 10812.08 9792.869999999999 11043.54 13172.82 17043.8 19604.7 True False 19130.415510869483 17614.70625414345 14484.545285618211 15121.122639497642 12835.849306389466 10724.030005213704 10165.543026714087 10823.267931210466 12619.212185115503 15967.65155928689 17193.446184432636 1.1126574222328172 1.0245012003522733 0.8424457278804799 0.8794701467812005 0.7465547725976748 0.6237277791885318 0.5912452290058183 0.6294996253287556 0.7339547900839823 0.9287057049531111 1.0 14.069571121276107 -5.650945265105496 1.713837955758489 0.8068589473717658 1.1343534638954542 0.43512203764206914 0.1271617220382036 0.49947630519608327 2.3390300120582324 0.023462219719042228 0.20904661249410322 2.2338537415911114e-06 5.650945265105496 0.32749451652368844 SSS(ph)LCR ddPTM_A549_MK2206_60min_R1 1 SSSLCR 6 0 A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2;H7C5K2;H7C5C6;H7C5A5;Q9P246-3 A0A1X7SBY3 STIM2 Stromal interaction molecule 2 1 S(0.015)S(0.067)S(0.918)LCR 76.134 0.045384 7528200.0 891.25 685.57 695.36 541.14 1115.9 798.5 539.64 911.41 1165.1 1049.1 1353.2 True False 1041.6712110295452 720.4625846937722 793.9725040499577 673.719324292698 951.7525882237915 882.996739998598 637.6856027866974 1040.605158576063 901.2067102823835 812.1075813684064 1017.1630935799408 1.0240945799196737 0.7083058648520948 0.7805754151534775 0.6623513264932958 0.935693198299267 0.8680975013464756 0.6269256197079868 1.0230465154940072 0.8860002058377435 0.7984044903852789 1.0 9.99033530646737 -9.16854181250349 0.5148143852012991 0.9892043653736696 0.7992479204711999 0.007433714944683922 0.13571881485976672 0.8029363884045364 0.4998167678720283 0.0552014716306959 0.038489835535257304 6.783568072995285e-10 9.16854181250349 -0.18995644490246977 SSS(ph)LCR ddPTM_A549_PD325901_60min_R1 2 SSSLCR 6 0 A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2;H7C5K2;H7C5C6;H7C5A5;Q9P246-3 A0A1X7SBY3 STIM2 Stromal interaction molecule 2 1 S(0.001)S(0.028)S(0.971)LCR;S(0.001)S(0.027)S(0.973)LCR 81.32 0.042338 13512800.0 2806.2 2762.1000000000004 3099.2 2479.0 2491.8 2156.2 2141.8 2467.0 2162.5 2796.9 3215.8999999999996 True False 3091.0833581847437 2994.8718605907948 3309.530349003571 2632.122199782513 2316.7845642433285 2138.640622085832 2223.3073710379313 2417.7937496759387 2071.61764529632 2620.303256678059 2820.3646872697304 1.0959871154737382 1.061873974705731 1.1734405709806912 0.9332559763150889 0.8214485788666233 0.7582851365779065 0.7883049242083002 0.8572628073912304 0.7345211967257188 0.9290654036711323 1.0 11.461666007037314 -6.442997080078537 4.226038773719593 0.8524254790580672 1.1039413090561865 0.7061455705492521 0.07550950402222885 0.13585211818215195 4.466814691474912 0.01486558079864238 0.03538964288538455 3.6058106733257015e-07 6.442997080078537 0.2515158299981193 SSS(ph)LDMNR ddPTM_A549_MK2206_60min_R1 7 SSSLDMNR 8 0 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.113)S(0.065)S(0.821)LDMNR;S(0.181)S(0.107)S(0.712)LDMNR;S(0.036)S(0.031)S(0.932)LDMNR;SS(0.004)S(0.996)LDMNR;S(0.028)S(0.028)S(0.945)LDMNR;S(0.002)S(0.029)S(0.969)LDMNR;S(0.001)S(0.004)S(0.996)LDMNR 125.71 0.0010912 456856000.0 18119.899999999998 19990.1 18254.7 17705.3 25269.7 19606.6 18362.9 20160.5 27940.600000000002 28453.199999999997 28092.9 True False 21178.096130978123 21007.510705379438 20843.490953866716 22043.099294821124 21552.56060456917 21681.357398192253 21699.2012367724 23018.31261394183 21612.09871196975 22025.602358394386 21116.657605403445 1.0029094815440374 0.9948312416641127 0.9870639257101546 1.043872553447124 1.0206426133960795 1.026741911686076 1.0275869241361326 1.0900547351798602 1.0234620987764431 1.043043968888256 1.0 14.366093879126865 -6.240329365991149 24.60818683432182 1.0216792896948168 0.9949245171092208 0.2507146369525527 0.023902310484550566 929.6371407004892 1083686.7272533092 0.0036480024522855432 0.009633637792264482 5.750036930326516e-07 6.240329365991149 -0.026754772585596 SSS(ph)LDMNR ddPTM_A549_PD325901_60min_R1 8 SSSLDMNR 8 0 H0YDT0;Q96D71-4;Q96D71-3;Q96D71;E9PMG1 H0YDT0 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.005)S(0.007)S(0.988)LDMNR;S(0.003)S(0.01)S(0.988)LDMNR;S(0.138)S(0.088)S(0.774)LDMNR;S(0.264)S(0.264)S(0.472)LDMNR;S(0.002)S(0.035)S(0.963)LDMNR;S(0.004)S(0.282)S(0.714)LDMNR;S(0.001)S(0.01)S(0.989)LDMNR;S(0.002)S(0.124)S(0.874)LDMNR 135.43 0.00090081 636065000.0 33980.7 33271.399999999994 32672.899999999998 34186.899999999994 37481.6 36559.6 33259.299999999996 36222.0 36349.5 36158.3 41453.4 True False 37430.395648730795 36075.297643988466 34890.27947210852 36298.547168916804 34849.02172050034 36261.87073889676 34525.000861687295 35499.5237943907 34821.856923791274 33875.258767185915 36354.89459475329 1.029583390791421 0.9923092350044889 0.9597133992830736 0.9984500731891925 0.9585785382948057 0.9974412288388271 0.9496658220725501 0.9764716468058185 0.9578313267566655 0.9317936180201376 1.0 15.149861992173125 -5.336104886833878 3.257819917057389 0.9773372973250547 1.0330300141851516 0.356579494536431 0.02190187062370688 0.21512417569601558 3.6577575485812734 0.0025911055954848813 0.02671354686083463 4.612061748088164e-06 5.336104886833878 0.055692716860096914 SSS(ph)LESLQTAVAEVR ddPTM_A549_MK2206_60min_R1 1 SSSLESLQTAVAEVR 15 0 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 S(0.003)S(0.003)S(0.994)LESLQTAVAEVR 82.55 0.00027674 1967800.0 940.27 920.21 1421.0 845.29 1638.1 1118.1 912.77 1340.0 1767.5 1423.1 1357.6 True False 1098.9645886056105 967.0447584653015 1622.5191674168618 1052.3860879465099 1397.1376599779492 1236.4165998652882 1078.6084939137463 1529.9491035778915 1367.1640721175115 1101.6207216141252 1020.470452146119 1.0769195583217652 0.9476460160424444 1.5899717272602978 1.0312754139360627 1.3691113319740649 1.2116143071707952 1.0569718031966129 1.4992586021087668 1.3397390088485877 1.079522409783979 1.0 9.995018694216046 -10.91796614294653 1.2212505427061646 1.0023807198430692 1.2458853651694068 0.12768523007401744 0.19350276886092413 0.6178071707238434 1.6624841529094094 0.12273885905159655 0.030271172612509285 1.2079079984298886e-11 10.91796614294653 0.24350464532633764 SSS(ph)LESLQTAVAEVR ddPTM_A549_PD325901_60min_R1 2 SSSLESLQTAVAEVR 15 0 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 S(0.002)S(0.12)S(0.874)LES(0.004)LQTAVAEVR;SS(0.012)S(0.988)LESLQTAVAEVR 176.29 1.4803999999999999e-27 9828800.0 3272.1 3759.7 3351.4 3203.8 4027.3 3663.8 4110.8 3678.3 4012.5 4273.6 3704.1000000000004 True False 3604.2811832072925 4076.5431136682982 3578.846157605372 3401.6914496422805 3744.436341430755 3633.9632275290205 4267.238743516073 3604.9334209294734 3843.868578844618 4003.76416666286 3248.519182224515 1.1095151301335888 1.2548927326563515 1.1016854009015444 1.047151412328394 1.1526594523190246 1.1186522300418007 1.3135950579777584 1.1097159101461405 1.1832679332410223 1.2324890025495154 1.0 11.665566508860875 -10.763317881260113 0.920644089136574 0.9961930815518193 1.1563969958248346 0.0 0.0986107877473968 0.49303180105817296 0.7131349144275906 0.05424517666391405 0.012532653542470688 1.724575129468567e-11 10.763317881260113 0.16020391427301528 SSS(ph)LGNK ddPTM_A549_MK2206_60min_R1 1 SSSLGNK 7 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 S(0.002)S(0.043)S(0.955)LGNK 56.916000000000004 0.036443 6592700.0 3849.0 3429.5 3441.2 2940.3 4914.0 3743.2 3662.9 4315.8 4958.1 5214.0 5171.7 True False 4498.617100984821 3604.046901421141 3929.2139049365987 3660.6736319950833 4191.157109536437 4139.302939464937 4328.401516654429 4927.577866583181 3835.0982664587477 4036.153778719732 3887.4241583412527 1.1572231168374387 0.9271041066326481 1.0107499837664171 0.9416707523773472 1.0781321869761662 1.0647932334790962 1.1134369032941698 1.2675688748834029 0.986539700904459 1.03825916965077 1.0 11.924598813936893 -4.591599728883357 4.773192209895475 1.0229055201628137 13.141661609919547 0.07940889258287354 0.09093051603375944 1576.3353907829924 295.8691007995991 0.013009829042304633 204295.17576134013 2.560945115875277e-05 4.591599728883357 12.118756089756733 SSS(ph)LGNK ddPTM_A549_PD325901_60min_R1 1 SSSLGNK 7 0 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 S(0.002)S(0.019)S(0.979)LGNK 49.85 0.053614999999999996 7323700.0 6681.6 6414.9 5752.4 6440.9 6649.5 5794.7 4728.6 5592.3 5994.1 7175.5 8517.4 True False 7359.911113266049 6955.506136093507 6142.792455991271 6838.739764654771 6182.462059529659 5747.509884426665 4908.549460589208 5480.757189425519 5742.1888220442415 6722.437705421508 7469.813796247148 0.9852870920241259 0.9311485300460862 0.822348805947134 0.9155167653697833 0.8276594608871968 0.769431479980696 0.6571180479833747 0.73372072436117 0.7687191379427866 0.899947159164647 1.0 12.866856565350092 -5.582014647659571 3.698538403287647 0.8486706636144692 0.9772616317602347 0.2109847643732442 0.09243614381382113 0.366194189449325 9.797493008669148 0.016743743687819536 0.08380163212899909 2.6180947049863256e-06 5.582014647659571 0.12859096814576554 SSS(ph)LGNLK ddPTM_A549_MK2206_60min_R1 3 SSSLGNLK 8 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.035)S(0.007)S(0.958)LGNLK;SSS(0.999)LGNLK;S(0.006)S(0.006)S(0.987)LGNLK 166.07 5.4841000000000006e-05 71617000.0 16302.4 16852.1 16039.9 15353.9 23216.800000000003 19371.3 18066.8 19406.0 25799.6 22643.3 25669.199999999997 True False 19053.846564586875 17709.799908861132 18314.599010168706 19115.60618926277 19801.639475108983 21421.15810837175 21349.30369955287 22156.85992838249 19956.03179349531 17528.162803545176 19294.829206120463 0.9875105066254152 0.9178521208803161 0.9491972597694298 0.9907113447368147 1.0262666367022184 1.1102020069489291 1.1064779828567082 1.1483314877622328 1.0342683824931245 0.9084383497929649 1.0 14.235926653043876 -6.579786913218747 2.5405983918741866 1.0416293595324455 0.9488350079991419 0.319956289472505 0.062101630100709515 0.2553934832030901 3.3175533142885696 0.00840148210195921 0.020161436594425867 2.6315588507131063e-07 6.579786913218747 -0.09279435153330362 SSS(ph)LGNLK ddPTM_A549_PD325901_60min_R1 2 SSSLGNLK 8 0 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 SS(0.005)S(0.995)LGNLK;S(0.001)S(0.01)S(0.989)LGNLK 135.86 0.0010773 138819000.0 14838.7 14443.8 16421.0 13490.1 15992.699999999999 13734.4 14617.6 14465.8 13948.3 14301.0 15313.099999999999 True False 16345.113900326422 15661.02971652051 17535.427807494714 14323.352838760009 14869.427923819836 13622.551600025814 15173.880767057639 14177.268270799434 13362.101457519842 13398.032419376075 13429.685777738765 1.2170883348157193 1.166150122624645 1.305721377082529 1.0665441526936243 1.107205944346636 1.0143611567298727 1.1298760833414343 1.055666417326001 0.9949675427007421 0.9976430306049932 1.0 13.71313792912483 -6.705027782347135 0.4666758791952809 0.9952597512796384 1.266597887889401 0.6604159009921355 0.05641563345099985 0.6629982075489905 0.20862631452957234 0.013323087258815142 0.07956436754487765 1.9722965618651043e-07 6.705027782347135 0.2713381366097627 SSS(ph)LGNLKK ddPTM_A549_MK2206_60min_R1 3 SSSLGNLKK 9 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.002)S(0.012)S(0.986)LGNLKK;S(0.011)S(0.011)S(0.977)LGNLKK;S(0.002)S(0.383)S(0.615)LGNLKK 124.6 3.5614e-05 455890000.0 16242.7 19304.6 20934.8 18148.9 25252.2 19054.3 19860.1 18420.8 26185.0 25148.0 28489.2 True False 18984.070664111736 20287.121683386664 23903.669434228366 22595.381314735074 21537.63483138706 21070.613378779322 23468.423096701677 21032.004811334045 20254.13930885263 19467.04933395548 21414.545378079853 0.8865035576960707 0.9473524338346575 1.1162352042596433 1.0551417700356103 1.005747936794082 0.9839393275351723 1.095910404930856 0.9821364142926247 0.9458122482294196 0.9090573248350232 1.0 14.386303429285915 -8.497847902355748 24.647465771569625 0.9738620155417437 1.0163912627927336 0.12284890073067622 0.06485432933669202 1239.0472414029168 1220072.23156742 0.010502503315682098 0.012664835821957224 3.177986863245571e-09 8.497847902355748 0.04252924725098994 SSS(ph)LGNLKK ddPTM_A549_PD325901_60min_R1 5 SSSLGNLKK 9 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6;H0YGH8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.271)S(0.271)S(0.458)LGNLKK;S(0.002)S(0.014)S(0.985)LGNLKK;S(0.003)S(0.005)S(0.992)LGNLKK;S(0.012)S(0.012)S(0.976)LGNLKK;S(0.001)S(0.067)S(0.933)LGNLKK 150.46 1.8135e-05 1705510000.0 32622.600000000002 33615.2 35474.9 35376.7 41287.8 39413.0 39814.6 39694.200000000004 38709.4 38476.600000000006 40121.0 True False 35934.42233651118 36448.07087655466 37882.44004190333 37561.838412684956 38387.88736317749 39092.033595338515 41329.766390385106 38902.468041502514 37082.57853356456 36047.18090954237 35186.37134797379 1.0212596798101055 1.0358576198751317 1.0766225271502683 1.0675109985402902 1.0909873878025804 1.1109992902859995 1.174595867861921 1.1056118193256865 1.0538903874695782 1.0244642891151134 1.0 15.102729121025206 -9.566965622011242 1.191134735541701 1.0118460183488664 1.0852128602058928 0.3229072899437264 0.03934423467238384 0.33810621597099905 0.9886237109665076 0.011579625953804506 0.00851900012687678 2.710406174393813e-10 9.566965622011242 0.07336684185702635 SSS(ph)LGSNR ddPTM_A549_MK2206_60min_R1 3 SSSLGSNR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.004)S(0.025)S(0.971)LGSNR;S(0.164)S(0.098)S(0.738)LGSNR;S(0.165)S(0.165)S(0.669)LGSNR 121.5 0.0011790999999999998 107387000.0 8906.8 9989.1 9213.7 7315.700000000001 13060.900000000001 10222.5 9675.9 10144.1 13688.2 13837.4 13895.3 True False 10410.050089647077 10497.502523104225 10520.341205368579 9108.046828414252 11139.65891166961 11304.238164853685 11433.885783121725 11582.057240003349 10587.844555563746 10711.52172950833 10444.713519229497 0.9966812464967466 1.0050541361213536 1.0072407621329054 0.8720245712479961 1.066535610685795 1.0822927928125303 1.0947055428634866 1.1088918062405366 1.01370368235287 1.0255448088439783 1.0 13.350485301819958 SSS(ph)LGSNR ddPTM_A549_PD325901_60min_R1 4 SSSLGSNR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.164)S(0.1)S(0.736)LGSNR;S(0.003)S(0.025)S(0.971)LGS(0.001)NR;S(0.002)S(0.015)S(0.978)LGS(0.005)NR;S(0.021)S(0.064)S(0.914)LGS(0.001)NR 116.12 8.366700000000001e-05 41993000.0 4076.4 4192.5 4235.8 3600.1 4700.5 4040.4 3459.1 4014.1 4245.4 4987.2 4672.7 True False 4490.233127112927 4545.816688580028 4523.266859934603 3822.470000579679 4370.353095844678 4007.4963219903507 3590.737943392152 3934.0356264994684 4066.980601776185 4672.307340879125 4097.987522685801 1.0957166419506446 1.1092802658414933 1.1037776066653509 0.9327676034685559 1.0664632509618697 0.9779181365988779 0.876219833153323 0.9599920948322265 0.9924336224212575 1.140146795229117 1.0 12.000699876383935 -6.244257833238168 24.126184772934636 0.9854371666381978 1.103560411703862 0.35765939812857805 0.0648509545685332 289.8742865212825 407037.7140875486 0.006358669340986024 0.01677346572468861 5.698258759218185e-07 6.244257833238168 0.11812324506566418 SSS(ph)LKER ddPTM_A549_PD325901_60min_R1 1 SSSLKER 7 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 S(0.303)S(0.303)S(0.393)LKER 67.563 0.0065323 84570000.0 6861.1 6311.0 5444.4 5443.9 5758.4 3999.4 4101.5 4824.0 4441.0 6287.8 7032.1 True False 7557.633821125141 6842.850118456427 5813.88972383681 5780.157339006056 5353.949849401552 3966.830212396842 4257.584826926921 4727.781535645207 4254.360213993507 5890.787234917338 6167.196280154696 1.225456995011608 1.1095560782581064 0.9427119650051053 0.9372423182972001 0.8681335255422185 0.6432145228070054 0.6903598707612603 0.7666014378135889 0.6898370054612227 0.9551807608058771 1.0 12.590399047614886 -5.728205757000501 1.0786623181404014 0.8180274443990905 1.2822196632867195 0.6270603068796681 0.10712651371262503 0.5922050575870418 0.877332831893309 0.020791748457224743 0.25848941007298104 1.8697960715864286e-06 5.728205757000501 0.46419221888762907 SSS(ph)LPAYGR ddPTM_A549_MK2206_60min_R1 2 SSSLPAYGR 9 0 Q08495-2;Q08495;Q08495-3;Q08495-4 Q08495-2 DMTN Dematin 1 SS(0.003)S(0.997)LPAYGR;S(0.006)S(0.157)S(0.837)LPAYGR 142.36 3.7733e-05 122779000.0 3098.2 3834.3 2925.8999999999996 3032.9 5015.1 3836.3 3767.1000000000004 3625.5 5360.4 5639.2 5648.9 True False 3621.1004162824524 4029.4494923805473 3340.836616428568 3775.9606361520555 4277.3854334627995 4242.25471967016 4451.533307867782 4139.425727628089 4146.277958799833 4365.300803405506 4246.122228291258 0.8528017380553999 0.9489716206313955 0.7867970908065455 0.8892727135816798 1.007362766187756 0.9990891669120288 1.0483761579466324 0.9748720138218663 0.9764857759331143 1.0280676270504365 1.0 12.051930185724409 -6.69857632606857 5.210839023290807 0.9940177256572452 0.8668943006135577 0.7132402288314956 0.04107344618078801 0.08270829717752348 4.387971741211482 0.005378711191993681 0.011268352450452355 2.0018137773703087e-07 6.69857632606857 -0.12712342504368757 SSS(ph)LPAYGR ddPTM_A549_PD325901_60min_R1 2 SSSLPAYGR 9 0 Q08495-2;Q08495;Q08495-3;Q08495-4 Q08495-2 DMTN Dematin 1 S(0.001)S(0.026)S(0.973)LPAYGR;S(0.001)S(0.032)S(0.967)LPAYGR 110.47 0.00036013 161688000.0 5719.0 5636.6 6139.700000000001 5883.1 6451.0 6354.9 5941.1 6783.0 7180.1 6753.0 7488.3 True False 6299.588669894716 6111.616063649419 6556.376963015365 6246.485725510483 5997.90401474184 6303.147801360383 6167.191811594664 6647.707743839443 6878.3453664703375 6326.61442752581 6567.286572244764 0.9592376700171094 0.9306151020543035 0.998338795009265 0.9511516905490195 0.9133001809439384 0.959779618571739 0.9390776150471314 1.012245722903971 1.0473648881929711 0.9633528791424903 1.0 12.68108169518394 -8.324609595841412 5.267811379168226 1.0225931035437175 0.9503043651265783 0.427884509826859 0.02867848850884563 0.10100144518306238 5.710179819017965 0.004196008676537424 0.005108847581044788 4.735767842163706e-09 8.324609595841412 -0.07228873841713912 SSS(ph)MAAGLER ddPTM_A549_MK2206_60min_R1 9 SSSMAAGLER 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.002)S(0.033)S(0.966)MAAGLER;S(0.01)S(0.025)S(0.965)MAAGLER;S(0.013)S(0.034)S(0.952)MAAGLER;S(0.043)S(0.029)S(0.928)MAAGLER;S(0.019)S(0.043)S(0.939)MAAGLER;S(0.054)S(0.02)S(0.927)MAAGLER;S(0.026)S(0.059)S(0.915)MAAGLER;S(0.018)S(0.003)S(0.979)MAAGLER;S(0.005)S(0.125)S(0.871)MAAGLER 165.3 3.0788999999999998e-09 440435000.0 22777.0 24352.17 23666.199999999997 21495.47 30110.200000000004 24240.590000000004 21998.76 24564.859999999997 35392.8 34323.5 34406.5 True False 26621.200755814818 25591.591436472056 27022.423025982353 26761.861114968324 25681.029466740747 26805.713144198642 25995.64993543824 28047.004131728645 27376.387310687795 26569.797511293975 25862.416478907973 1.0293392644699566 0.9895282390701275 1.04485298378906 1.034778058608479 0.9929864631050561 1.0364736476214422 1.005151624429176 1.0844695875423052 1.0585394188905177 1.027351699055767 1.0 14.658569460546872 SSS(ph)MAAGLER ddPTM_A549_PD325901_60min_R1 7 SSSMAAGLER 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.007)S(0.021)S(0.973)MAAGLER;S(0.106)S(0.052)S(0.843)MAAGLER;S(0.361)S(0.127)S(0.512)MAAGLER;S(0.011)S(0.026)S(0.964)MAAGLER;S(0.065)S(0.15)S(0.785)MAAGLER;S(0.001)S(0.003)S(0.996)MAAGLER;S(0.001)S(0.004)S(0.995)MAAGLER 177.47 6.2213e-11 477224000.0 33626.0 33935.799999999996 38270.299999999996 37212.1 42049.6 39505.5 37335.799999999996 41541.4 38553.3 40679.49999999999 42368.3 True False 37039.68676584716 36795.688963700464 40867.552696009094 39510.60690218912 39096.181159244814 39183.780306006796 38756.63429993371 40712.824188402126 36933.03887371222 38110.98942759309 37157.26769478221 0.9968355873230269 0.9902689634218578 1.0998535476748172 1.0633345601925779 1.0521812712492549 1.0545387951522915 1.043043170404483 1.0956893957549845 0.9939654114798792 1.0256671653213298 1.0 15.181356798705036 -8.801128341766931 24.99766107362694 0.9971503060298568 1.0496818915615522 0.23760011831466032 0.033095313448520305 122.18565759415637 76956.77842787358 0.005590724694213527 0.005951818296729827 1.5807808213053716e-09 8.801128341766931 0.05253158553169546 SSS(ph)MADR ddPTM_A549_MK2206_60min_R1 7 SSSMADR 7 0 O95816 O95816 BAG2 BAG family molecular chaperone regulator 2 1 S(0.35)S(0.142)S(0.508)MADR;S(0.125)S(0.157)S(0.718)MADR;S(0.162)S(0.162)S(0.676)MADR;S(0.076)S(0.179)S(0.744)MADR;S(0.071)S(0.174)S(0.755)MADR;S(0.001)S(0.002)S(0.997)MADR;S(0.001)S(0.004)S(0.995)MADR 136.39 0.005543899999999999 455990000.0 20102.499999999996 18987.100000000002 14335.519999999999 10270.85 30428.7 24588.299999999996 20610.9 28116.2 25155.800000000003 25117.1 23695.7 True False 23495.310541061914 19953.46228953883 16368.512297598723 12787.208711075978 25952.67853865515 27190.217585607414 24355.63373818906 32101.757452251244 19458.051465557972 19443.129665416447 17811.40372194962 1.319116163321132 1.1202633212423048 0.9189905833995121 0.7179225686360615 1.4570821561173615 1.5265623086236573 1.367417982232066 1.8023148513943972 1.0924490719156026 1.0916113052592251 1.0 14.12051359968872 -6.768287190284421 24.98452170419854 1.1888559379465193 1.019152273859471 0.11001442669358252 0.27791401689286405 398.8011255950619 1455048.870870129 0.046803424222400455 0.08986985415380952 1.7049545636706234e-07 6.768287190284421 -0.1697036640870484 SSS(ph)MADR ddPTM_A549_PD325901_60min_R1 9 SSSMADR 7 0 O95816 O95816 BAG2 BAG family molecular chaperone regulator 2 1 S(0.169)S(0.169)S(0.663)MADR;S(0.015)S(0.029)S(0.957)MADR;S(0.009)S(0.02)S(0.971)MADR;S(0.071)S(0.174)S(0.755)MADR;S(0.012)S(0.026)S(0.962)MADR;S(0.158)S(0.158)S(0.685)MADR;S(0.04)S(0.026)S(0.935)MADR;S(0.001)S(0.012)S(0.987)MADR;SS(0.002)S(0.998)MADR 129.42 0.0049999 759320000.0 25757.9 30479.199999999997 25530.4 24722.000000000004 31122.3 23641.0 21406.200000000004 22071.3 23215.4 26586.1 31187.100000000002 True False 28372.82304603621 33047.78915076171 27263.046470766894 26249.021792264317 28936.377014106307 23448.475534148565 22220.82465492211 21631.070606900117 22239.737471728175 24907.449108787776 27351.284411315613 1.0373488359580647 1.2082719280667262 0.9967739013926449 0.9596997858500833 1.05795313225345 0.8573080218656056 0.8124234431100077 0.7908612364087384 0.813114921306119 0.9106500716464786 1.0 14.739320962853432 -6.478118972869105 1.0520580026500757 0.8913365473897483 1.1155148895063556 0.5373436256443898 0.08302690792073099 0.4333750454437226 0.866979772679051 0.015797219116907072 0.06634505314758546 3.3256843530239405e-07 6.478118972869105 0.22417834211660725 SSS(ph)MSS(ph)LTGAYTSGIPSSSR ddPTM_A549_PD325901_60min_R1 1 SSSMSSLTGAYTSGIPSSSR 20 0 A8CG34;A8CG34-2 A8CG34 POM121C Nuclear envelope pore membrane protein POM 121C 2 S(0.26)S(0.344)S(0.397)MS(0.131)S(0.866)LT(0.002)GAYTSGIPSSSR 83.213 0.00052896 4972300.0 1534.6 1550.8 1875.5 1794.9 2020.2 1960.7 1985.6 1666.1 2457.7 2158.6 2210.8 True False 1690.391462287189 1681.4913585330728 2002.7827082976887 1905.7668964863365 1878.3081213116511 1944.7327092680123 2061.1630945620122 1632.8683284698343 2354.4114158819734 2022.30562761102 1938.8856154158789 0.871836610085227 0.8672462909434724 1.0329555763237246 0.9829186834611496 0.9687565405495908 1.0030156981957283 1.0630658550323535 0.8421684680556023 1.2143116629275559 1.0430247207632453 1.0 10.921011978803074 -5.992668821294357 0.4091282426185518 1.0858733517922916 0.797947407884496 0.1920985702767405 0.09068347939784722 3.050645272086504 0.5017036581179802 0.028144809632519745 0.3854580158958394 1.0170239462946809e-06 5.992668821294357 -0.2879259439077956 SSS(ph)MSSLTGAYASGIPSSSR ddPTM_A549_MK2206_60min_R1 3 SSSMSSLTGAYASGIPSSSR 20 0 Q96HA1;Q96HA1-2;Q96HA1-3 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.189)S(0.189)S(0.486)MS(0.107)S(0.024)LT(0.006)GAYASGIPSSSR;S(0.035)S(0.035)S(0.883)MS(0.046)SLTGAYASGIPSSSR;S(0.113)S(0.113)S(0.768)MS(0.006)SLTGAYASGIPSSSR 132.59 7.2211e-17 8572300.0 1988.2600000000002 2600.54 2279.1800000000003 2031.33 2917.7200000000003 2749.25 2434.03 2172.97 4239.299999999999 4339.26 3504.45 True False 2323.829679710074 2732.89637819558 2602.4019957728096 2529.005941189869 2488.527253080312 3040.17381019555 2876.2617444053562 2480.9951519415276 3279.1053187710145 3359.018152253048 2634.1983471003714 0.882177183911781 1.0374679572644374 0.9879294012303356 0.9600666343040212 0.9447000283101655 1.154117271974626 1.0918926236406759 0.9418406759963674 1.2448209613298606 1.2751576417738366 1.0 11.363148264882382 -7.254515462042095 24.8414133569944 1.1042512986019128 0.9679159735712131 0.38791499405202845 0.09631551273002377 507.57839261115856 1821073.1865614308 0.015181098799942987 0.02593320132370832 5.5652482013734026e-08 7.254515462042095 -0.13633532503069978 SSS(ph)MSSLTGAYASGIPSSSR ddPTM_A549_PD325901_60min_R1 3 SSSMSSLTGAYASGIPSSSR 20 0 Q96HA1;Q96HA1-2;Q96HA1-3 Q96HA1 POM121 Nuclear envelope pore membrane protein POM 121 1 S(0.119)S(0.119)S(0.746)MS(0.014)S(0.003)LTGAYASGIPSSSR;S(0.019)S(0.019)S(0.944)MS(0.014)S(0.003)LTGAYASGIPSSSR;S(0.002)S(0.027)S(0.97)MS(0.001)SLTGAYASGIPSSSR 120.4 1.5746e-14 14765300.0 5560.1 5589.4 5728.16 5980.400000000001 6837.4 6402.700000000001 6189.0 6060.700000000001 6880.1 5703.0 6643.0 True False 6124.557258870715 6060.438354001002 6116.9073838243075 6349.795725526154 6357.164611749473 6350.558534008416 6424.525781750747 5939.814583972829 6590.953323192238 5342.911606719931 5825.9531134465715 1.0512541277984113 1.0402483912912426 1.049941059378971 1.0899153497941012 1.0911801876806801 1.0900462826161492 1.1027424451670649 1.0195438357139297 1.131309022721108 0.9170879858933711 1.0 12.508278375554989 -4.5217146857996235 19.739534036000908 1.0654675735152683 1.0477064127539837 0.0 0.05805800739867599 0.0 0.0 0.006368267834227698 0.0 3.008051824039632e-05 4.5217146857996235 -0.017761160761284644 SSS(ph)MSSLTGAYTSGIPSSSR ddPTM_A549_MK2206_60min_R1 2 SSSMSSLTGAYTSGIPSSSR 20 0 A8CG34;A8CG34-2 A8CG34 POM121C Nuclear envelope pore membrane protein POM 121C 1 S(0.012)S(0.091)S(0.897)MSSLTGAYTSGIPSSSR;S(0.013)S(0.013)S(0.974)MSSLTGAYTSGIPSSSR 129.15 1.0332e-16 4914800.0 2546.6 2527.93 2688.6 2163.4700000000003 3367.8 2557.6 2704.3 2751.0 4166.5 3952.5 3880.1000000000004 True False 2976.4038216076733 2656.5908393379646 3069.8839081752103 2693.5202471218595 2872.4010812976835 2828.2435344025207 3195.6363049738084 3140.9626745841606 3222.7944025333004 3059.627504869533 2916.5640846878005 1.020517202839477 0.9108631808521827 1.0525686455142034 0.9235251374255963 0.9848578662742312 0.9697176034125327 1.0956852694412442 1.0769393654247033 1.1049969446765233 1.0490520406984463 1.0 11.510054059017962 -7.7460735524697455 24.88751225263218 1.056471778619728 0.9753619704152988 0.48091235929122456 0.045251297646660214 189.37137071793842 306717.7584505251 0.007866210821807933 0.011643088526311345 1.7944296950109045e-08 7.7460735524697455 -0.08110980820442915 SSS(ph)MSSLTGAYTSGIPSSSR ddPTM_A549_PD325901_60min_R1 3 SSSMSSLTGAYTSGIPSSSR 20 0 A8CG34;A8CG34-2 A8CG34 POM121C Nuclear envelope pore membrane protein POM 121C 1 S(0.057)S(0.057)S(0.839)MS(0.03)S(0.012)LT(0.006)GAYTSGIPSSSR;S(0.11)S(0.11)S(0.75)MS(0.024)S(0.005)LTGAYTSGIPSSSR;S(0.086)S(0.086)S(0.766)MS(0.052)S(0.009)LTGAYTSGIPSSSR 98.165 2.9144e-07 11791800.0 4683.5 4871.2 5130.1 4119.4 6004.700000000001 5928.700000000001 5006.5 4877.8 6197.400000000001 6060.200000000001 6211.999999999999 True False 5158.9654721895295 5281.713119477884 5478.259435797376 4373.845982163808 5582.95058709042 5880.418632854218 5197.025097161923 4780.508452439928 5936.944830039034 5677.5579377598015 5447.963381112464 0.9469530375470472 0.9694839612522079 1.0055609872103666 0.8028405619111699 1.0247775538370802 1.0793792508299582 0.9539390655927464 0.8774854230873624 1.0897549074250057 1.0421431901402491 1.0 12.411501290863576 -8.77770450917197 24.992932691892303 1.042384257607706 0.9605746827766798 0.22328519345221476 0.07160092984842732 285.30336788914997 438394.487902452 0.013031999920548506 0.013893280597054962 1.6683819815103753e-09 8.77770450917197 -0.08180957483102624 SSS(ph)NVNGGPELDR ddPTM_A549_MK2206_60min_R1 1 SSSNVNGGPELDR 13 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 S(0.036)S(0.166)S(0.798)NVNGGPELDR 110.57 5.1992e-05 23109000.0 1458.0 1665.9 1605.5 1246.8 1975.5 1394.3 1453.2 992.25 2108.5 2125.1 2156.2 True False 1704.0747553223855 1750.6871943657914 1833.1840417225708 1552.2660559709793 1684.9065669290255 1541.8439005385662 1717.2276294745175 1132.904476138181 1630.9281165826146 1645.0384340539501 1620.7560319073823 1.051407319654982 1.0801670084210637 1.131067233829877 0.9577419583280522 1.03958062395495 0.9513115300419716 1.059522590487356 0.6989975380840789 1.006276135627434 1.0149821451646805 1.0 10.662451226815076 -6.268256127571098 24.76472461201871 0.9818543820575699 1.0868091704524137 0.2390285080546548 0.09350073548911302 546.3175715025201 1984733.5449923303 0.012695411510069846 0.030150942780454656 5.391925369491422e-07 6.268256127571098 0.10495478839484373 SSS(ph)NVNGGPELDR ddPTM_A549_PD325901_60min_R1 2 SSSNVNGGPELDR 13 0 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 SS(0.005)S(0.995)NVNGGPELDR;S(0.004)S(0.107)S(0.889)NVNGGPELDR 157.37 2.0591999999999998e-18 51420000.0 4551.200000000001 5350.4 4758.9 5056.1 6072.1 4767.8 5560.7 5281.0 5543.4 5353.6 4725.8 True False 5013.234473583641 5801.296985230431 5081.867571590442 5368.403813763756 5645.6166436078 4728.972617559054 5772.315481431798 5175.666312135643 5310.430175692773 5015.572782348906 4144.556559314437 1.2095948991978274 1.3997388869486294 1.2261547161588375 1.2952902770017352 1.3621762817833658 1.141008103009526 1.3927462199687324 1.2487865078120117 1.2813023781176691 1.2101590871228323 1.0 12.017002035622847 -10.647173379916866 0.5984635292001483 0.9628008852467186 1.29227946345721 0.24005578159558094 0.09712915655935327 0.46302627638104177 0.24594960795964238 0.0819512904597596 0.014700855522223657 2.25333944985303e-11 10.647173379916866 0.3294785782104913 SSS(ph)PAELDLKDDLQQTQGK ddPTM_A549_MK2206_60min_R1 2 SSSPAELDLKDDLQQTQGK 19 1 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.022)S(0.022)S(0.956)PAELDLKDDLQQTQGK;S(0.2)S(0.2)S(0.599)PAELDLKDDLQQTQGK 153.83 5.921e-23 23214000.0 5633.299999999999 6125.299999999999 6351.6 6830.6 8058.299999999999 7050.799999999999 6141.8 6184.9 9953.8 9516.9 9153.6 True False 6584.063319038132 6437.051606728362 7252.3523882934105 8504.097306637284 6872.934744765457 7796.9109760577485 7257.685559253094 7061.628515461862 7699.280192952355 7367.025680225898 6880.50849349198 0.9569152229469313 0.935548820674654 1.0540430834658723 1.2359693058559549 0.9988992457848593 1.133188191458896 1.0548181963757288 1.0263236390364459 1.118998719387502 1.0707094813114608 1.0 12.748299473707295 -5.794460083881161 6.423223623283285 1.0685710285558678 0.9459193534969167 0.370286535918844 0.06511105571717422 0.13980614867766206 17.05251888137542 0.00945656156978947 0.031105731628891128 1.6052397893237058e-06 5.794460083881161 -0.12265167505895114 SSS(ph)PAELDLKDDLQQTQGK ddPTM_A549_PD325901_60min_R1 2 SSSPAELDLKDDLQQTQGK 19 1 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.034)S(0.034)S(0.931)PAELDLKDDLQQTQGK;S(0.116)S(0.116)S(0.767)PAELDLKDDLQQTQGK 115.66 1.7727e-14 42707000.0 7077.099999999999 7792.5 7296.1 8411.3 7965.4 8222.0 7926.4 7708.0 8386.2 8808.6 9301.8 True False 7795.56198211434 8449.201322781124 7791.257221013475 8930.846897551686 7405.9377831382135 8155.042757995416 8228.043489492506 7554.257893190979 8033.757177796074 8252.423492714923 8157.737568968434 0.9556034275689635 1.0357285033195234 0.9550757370096056 1.0947700660933388 0.9078421217311496 0.9996696619681332 1.0086183111346352 0.9260236467923341 0.9848021108641721 1.011606885235763 1.0 12.99395338163837 -6.7771342806590935 24.999995432152964 0.9843694552074586 1.0081670096472306 0.08879694894998313 0.04758771659352893 556.6208219339885 886626.8308113273 0.006181782014416414 0.011714688307623069 1.6705740052554377e-07 6.7771342806590935 0.02379755443977205 SSS(ph)PAGETEGDREPQAR ddPTM_A549_MK2206_60min_R1 1 SSSPAGETEGDREPQAR 17 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.028)S(0.028)S(0.944)PAGETEGDREPQAR 112.55 8.773099999999999e-10 140590000.0 572.94 598.87 653.48 721.31 503.18 650.95 500.05 937.9 713.82 708.99 668.09 True False 669.6382649618711 629.3499250194142 746.153290305117 898.0309823808365 429.16288855851565 719.8330969343608 590.9026122479581 1070.850197198286 552.1409097363066 548.8286665850602 502.1848146540222 1.3334498483854298 1.2532237269121762 1.4858141236691431 1.788247983960906 0.8545915289258305 1.433402755179458 1.176663640566387 2.1323826725745243 1.0994775103199834 1.0928818446315887 1.0 8.972074594022203 -8.969305154778262 24.99946981218994 1.043886557622424 1.4249103834262145 0.21804212525550537 0.31121033294964817 184.3592962194107 150152.88613484314 0.05141290199692564 0.05419215707376045 1.073235044276162e-09 8.969305154778262 0.38102382580379035 SSS(ph)PAGETEGDREPQAR ddPTM_A549_PD325901_60min_R1 3 SSSPAGETEGDREPQAR 17 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.016)S(0.016)S(0.967)PAGETEGDREPQAR;S(0.029)S(0.029)S(0.938)PAGET(0.004)EGDREPQAR;SSS(0.999)PAGETEGDREPQAR 215.51 9.073e-56 328512300.0 2763.46 2748.79 2806.84 2332.5 3398.3599999999997 2810.46 2496.42 2302.64 2779.38 2953.7799999999997 2348.9 True False 3044.0044248482695 2980.4401801793447 2997.329041300072 2476.5732275081514 3159.6709173055456 2787.572545565043 2591.42262919344 2256.712038813865 2662.572324154306 2767.277826704751 2060.000190903905 1.4776719139587042 1.4468154873672903 1.4550139628797205 1.202219901941591 1.5338206915015464 1.3531904306969444 1.2579720335153721 1.0954911794564663 1.2925107171888168 1.3433386263379423 1.0 11.008428755767719 -13.753446580512017 0.07897692971802492 1.4878088663234177e-11 1.7584261445849307 0.2519279380286914 0.13736669018788641 51.20820776079549 0.3856381518236654 10.203751757226755 1.6769265086369551 1.764222755675529e-14 13.753446580512017 1.7584261445700526 SSS(ph)PAGETEGDREPQARPGEGTAPLPPPGQK ddPTM_A549_MK2206_60min_R1 3 SSSPAGETEGDREPQARPGEGTAPLPPPGQK 31 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.033)S(0.033)S(0.934)PAGETEGDREPQARPGEGTAPLPPPGQK;S(0.02)S(0.062)S(0.917)PAGET(0.001)EGDREPQARPGEGTAPLPPPGQK;S(0.022)S(0.13)S(0.847)PAGET(0.001)EGDREPQARPGEGTAPLPPPGQK 186.92 1.0627999999999999e-67 236247000.0 10973.5 13957.699999999999 12027.400000000001 10698.099999999999 17684.2 11378.099999999999 12951.8 11660.400000000001 18630.6 18734.7 19853.8 True False 12825.558523683269 14668.087311843094 13733.066174658383 13319.134980255962 15082.877606118094 12582.122989828491 15304.974409185292 13313.297408477338 14410.798846954742 14502.518258185763 14923.553522995438 0.8594171960398436 0.9828816768902459 0.920227622295008 0.8924908507704109 1.0106760151244913 0.843105026590411 1.0255583152901304 0.8920996857727694 0.9656412478937673 0.971787197723323 1.0 13.865303483479627 -9.73701484554468 0.2278262759408393 1.0289395241488903 0.9101281729809713 0.13414831102888924 0.056248513754172384 3.8698709159317084 0.4807431448686526 0.1510729431659097 0.06260306428828874 1.8322517891998407e-10 9.73701484554468 -0.11881135116791908 SSS(ph)PAGETEGDREPQARPGEGTAPLPPPGQK ddPTM_A549_PD325901_60min_R1 4 SSSPAGETEGDREPQARPGEGTAPLPPPGQK 31 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.002)S(0.009)S(0.989)PAGETEGDREPQARPGEGTAPLPPPGQK;S(0.16)S(0.16)S(0.679)PAGETEGDREPQARPGEGTAPLPPPGQK;S(0.009)S(0.039)S(0.952)PAGETEGDREPQARPGEGTAPLPPPGQK;S(0.042)S(0.042)S(0.915)PAGET(0.001)EGDREPQARPGEGTAPLPPPGQK 223.26 3.0311999999999995e-105 561101000.0 24375.399999999998 25525.800000000003 24156.0 24102.7 27821.699999999997 29103.2 25977.4 28390.3 29468.0 27878.4 30410.399999999998 True False 26849.972663778943 27676.9487488029 25795.371421828288 25591.469037796684 25867.59977165447 28866.19318833522 26965.984172378718 27824.03319474052 28229.562437730405 26118.1530662425 26670.113587408643 1.0067438436578393 1.0377514388191282 0.9672014083212104 0.9595560571545071 0.9699096213773513 1.0823423415025641 1.0110937129682778 1.0432663926814567 1.0584717738531868 0.9793041555913458 1.0 14.702936348856818 -7.227832428250931 24.997381820880914 1.0316033303141825 0.9882219997801549 0.2735613923314195 0.033004377482706564 648.431285710554 482313.81675719033 0.0048902771782622445 0.008469927462870529 5.917899312151311e-08 7.227832428250931 -0.043381330534027596 SSS(ph)PALIETK ddPTM_A549_MK2206_60min_R1 2 SSSPALIETK 10 0 H7C1A6;C9JLX3;U3KQ91;A0A0A0MSC1;O60266-2;O60266 H7C1A6 ADCY3 Adenylate cyclase type 3 1 SS(0.002)S(0.998)PALIETK;S(0.098)S(0.098)S(0.804)PALIETK 181.31 6.4404e-14 15258700.0 5760.2 7181.799999999999 6617.6 6729.799999999999 9116.3 7001.9 6037.0 6493.3 10266.6 10116.0 11378.2 True False 6732.380936631004 7547.322944052012 7556.0751881054375 8378.601302112203 7775.304346289584 7742.836410514945 7133.844755806264 7413.745159897254 7941.231492391308 7830.788574132876 8552.678917655401 0.787166337173405 0.8824513367936658 0.8834746704342352 0.9796464222240534 0.9091074762831242 0.9053112463430975 0.8341064623716646 0.8668330977084815 0.928508081368298 0.9155948270158585 1.0 13.062160664411094 -14.999999999999998 0.12776123172214413 1.3998545183904536 0.840511249524973 0.1333095253156763 0.05344990872596601 50.470520662102764 0.443021589157824 5.067864869076726 0.15459276912692396 1.000000000000004e-15 14.999999999999998 -0.5593432688654806 SSS(ph)PALIETK ddPTM_A549_PD325901_60min_R1 2 SSSPALIETK 10 0 H7C1A6;C9JLX3;U3KQ91;A0A0A0MSC1;O60266-2;O60266 H7C1A6 ADCY3 Adenylate cyclase type 3 1 S(0.001)S(0.004)S(0.996)PALIETK;SS(0.004)S(0.996)PALIETK 205.56 5.8864e-20 19238900.0 7385.4 8522.8 7353.299999999999 7829.6 9504.2 8791.3 7936.0 7827.700000000001 10011.5 9589.7 16086.1 True False 8135.16037115588 9241.046266769206 7852.339156985013 8313.21660968824 8836.657779710022 8719.70656754622 8238.00882274583 7671.570382788143 9590.751470929068 8984.204705411563 14107.611678189502 0.5766504321729321 0.655039738657958 0.556603012338708 0.5892717207789714 0.6263751782572508 0.6180852412479546 0.5839407130465512 0.5437894491133791 0.679828144529698 0.6368338532666891 1.0 13.784186149789694 -10.19179040195044 0.5984541250566656 1.0145578039021739 0.591131197129876 0.14666127600215995 0.11069951221742498 0.15053180789752135 0.09900910661479671 0.03129880618805893 0.009430317267556918 6.42997964415747e-11 10.19179040195044 -0.4234266067722978 SSS(ph)PAPADIAQTVQEDLR ddPTM_A549_MK2206_60min_R1 13 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.022)S(0.137)S(0.841)PAPADIAQTVQEDLR;S(0.021)S(0.021)S(0.957)PAPADIAQTVQEDLR;S(0.018)S(0.018)S(0.963)PAPADIAQTVQEDLR;S(0.005)S(0.005)S(0.99)PAPADIAQTVQEDLR;S(0.133)S(0.133)S(0.734)PAPADIAQTVQEDLR;S(0.094)S(0.094)S(0.811)PAPADIAQTVQEDLR;S(0.005)S(0.005)S(0.989)PAPADIAQTVQEDLR;S(0.004)S(0.004)S(0.992)PAPADIAQTVQEDLR;S(0.002)S(0.012)S(0.986)PAPADIAQTVQEDLR;SS(0.005)S(0.995)PAPADIAQTVQEDLR;S(0.076)S(0.076)S(0.848)PAPADIAQTVQEDLR;S(0.002)S(0.041)S(0.957)PAPADIAQTVQEDLR;SS(0.002)S(0.997)PAPADIAQTVQEDLR 404.84 0.0 7537146600.0 67594.39 75933.42 69706.99 64142.25 98317.3 72449.51999999999 68384.44 69090.20999999999 107391.70000000001 102166.6 106683.54 True False 79002.67050782997 79798.10674014018 79592.4893581531 79857.1041294551 83854.95541013987 80116.0801183009 80809.00756547094 78883.95884739423 83067.65141930524 79087.09410221453 80191.07270208345 0.9851803679111703 0.9950996295634656 0.9925355363912624 0.9958353397532282 1.0456894088655984 0.9990648262798386 1.0077057812368113 0.9837000078606598 1.035871558021284 0.9862331483708879 1.0 16.291154016662237 -6.549652255479301 24.99942530312363 1.01455858464687 0.9918264004540222 0.09860634333326923 0.018420121540222666 228.33509355179342 213204.266505575 0.002615422649795257 0.005444526414053936 2.820640546193173e-07 6.549652255479301 -0.02273218419284795 SSS(ph)PAPADIAQTVQEDLR ddPTM_A549_PD325901_60min_R1 9 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.026)S(0.004)S(0.97)PAPADIAQTVQEDLR;S(0.005)S(0.168)S(0.827)PAPADIAQTVQEDLR;S(0.004)S(0.004)S(0.992)PAPADIAQTVQEDLR;SS(0.001)S(0.999)PAPADIAQTVQEDLR;SS(0.001)S(0.999)PAPADIAQTVQEDLR;S(0.023)S(0.014)S(0.962)PAPADIAQTVQEDLR;S(0.061)S(0.077)S(0.861)PAPADIAQTVQEDLR;SS(0.004)S(0.996)PAPADIAQTVQEDLR;S(0.027)S(0.027)S(0.945)PAPADIAQTVQEDLR 430.75 0.0 11762545100.0 118788.19999999998 127683.8 138411.19999999998 135799.30000000002 160620.9 145803.2 150829.2 152967.80000000002 153617.7 159412.70000000004 165288.90000000002 True False 130847.49061674906 138444.16193233515 147804.61636615967 144187.31433841275 149339.44209602353 144615.82708009676 156569.08774290557 149916.73722808275 147161.68228894172 149347.35491645828 144959.41315266577 0.9026491468956584 0.9550546523427974 1.0196275850709842 0.9946736897076157 1.0302155537753515 0.9976297774315135 1.0800891390061915 1.0341980142413802 1.0151923154790687 1.0302701402300194 1.0 17.145289494402054 -5.499305442390525 2.1928883072081256 1.0149324932378854 0.8962631172825164 0.7082011186955977 0.02373538881768047 0.17920025887531543 1.3572593190395579 0.003392352836069643 0.0338310498145379 3.167339067473109e-06 5.499305442390525 -0.11866937595536897 SSS(ph)PATEQSWMENDFDELREEGFR ddPTM_A549_MK2206_60min_R1 2 SSSPATEQSWMENDFDELREEGFR 24 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.218)S(0.218)S(0.561)PAT(0.002)EQS(0.001)WMENDFDELREEGFR;S(0.176)S(0.176)S(0.566)PAT(0.045)EQS(0.036)WMENDFDELREEGFR 84.948 1.5005e-06 8700800.0 2864.5 2742.8 2340.6 2630.7 3455.1 3019.3 3082.7 2978.0 4299.7 3609.0 4010.5 True False 3347.957569698886 2882.3968045539923 2672.532275338428 3275.221618096609 2946.8593669432944 3338.800321950866 3642.7866868848737 3400.140619742507 3325.824815209995 2793.7243934406415 3014.5821658308855 1.1105875990532554 0.9561513490077787 0.8865348921752872 1.0864595615339234 0.9775349301620627 1.1075499483128597 1.208388588035331 1.1278978089506986 1.1032457011478816 0.9267368543164686 1.0 11.557742336851256 -6.310281125520424 24.985348927046143 1.0679158367404369 0.9815969774228498 0.14862747583703728 0.08817802929662846 484.8102454116598 248007.45107364128 0.01189056130537356 0.027631205665986935 4.894618805708683e-07 6.310281125520424 -0.0863188593175871 SSS(ph)PATEQSWMENDFDELREEGFR ddPTM_A549_PD325901_60min_R1 4 SSSPATEQSWMENDFDELREEGFR 24 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.001)S(0.002)S(0.997)PATEQSWMENDFDELREEGFR;S(0.084)S(0.084)S(0.832)PATEQSWMENDFDELREEGFR;S(0.143)S(0.143)S(0.698)PAT(0.009)EQS(0.008)WMENDFDELREEGFR;S(0.145)S(0.145)S(0.708)PAT(0.001)EQS(0.001)WMENDFDELREEGFR 405.61 0.0 98749000.0 13668.900000000001 13466.300000000001 13722.9 14339.599999999999 13802.8 13180.999999999998 13580.300000000001 12224.099999999999 17096.6 16093.900000000001 17810.399999999998 True False 15056.556665487653 14601.15236098397 14654.21851650139 15225.324524405527 12833.338945074964 13073.658306146623 14097.105747925312 11980.280735879065 16378.089357028008 15077.728407397848 15619.833709427778 0.9639383456688054 0.9347828301252046 0.9381801873893469 0.9747430611387281 0.8216053502111902 0.8369908764301158 0.9025131771676045 0.7669915671796198 1.048544412296948 0.9652937853171428 1.0 13.931091474011357 -8.798674800731789 24.999720698109503 1.022923788431998 0.8942682632875628 0.3738408409397376 0.06341130785142578 105.63056682429668 70919.51010413864 0.0109458621771738 0.01165289825802643 1.5897366962545062e-09 8.798674800731789 -0.12865552514443512 SSS(ph)PATEQSWMENDFDELREEGFRR ddPTM_A549_MK2206_60min_R1 1 SSSPATEQSWMENDFDELREEGFRR 25 2 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.146)S(0.146)S(0.708)PATEQSWMENDFDELREEGFRR 142.2 2.2928e-32 10648000.0 300.81 241.7 453.14 266.77 566.76 418.99 374.59 453.05 419.16 414.82 374.35 True False 351.579373901596 254.00149761583035 517.4020658151139 332.12866197576045 483.39035478243215 463.32724369694733 442.64815422850245 517.2712249074357 324.2209292609767 321.11187389499804 281.3885634656007 1.2494444321813243 0.9026717166025889 1.8387458944413193 1.1803204006774164 1.7178749158422204 1.6465745373251046 1.5730850919341484 1.8382809114083671 1.1522178629715778 1.1411688873924453 1.0 8.136419883783594 -8.942218032359703 10.076447548928828 1.0669438676762266 1.4907019943580275 0.2928301017006657 0.27551161889569303 0.34807153288088694 58.45581837330333 0.04753323828835865 0.05044358694047006 1.1423047103690323e-09 8.942218032359703 0.4237581266818009 SSS(ph)PEAMDPPPPK ddPTM_A549_MK2206_60min_R1 3 SSSPEAMDPPPPK 13 0 Q9UK33;K7ERU0;K7ENY2 Q9UK33 ZNF580 Zinc finger protein 580 1 S(0.066)S(0.066)S(0.868)PEAMDPPPPK;S(0.091)S(0.091)S(0.819)PEAMDPPPPK;S(0.101)S(0.101)S(0.798)PEAMDPPPPK 130.56 1.5018e-08 23160100.0 6129.6 7138.400000000001 5930.5 5286.5 9006.8 6359.400000000001 5803.7 6048.5 8771.5 9323.1 9047.4 True False 7164.126625668107 7501.7140694284 6771.534076260165 6581.692737320002 7681.911651235812 7032.3474869719275 6858.15716569038 6905.893397754384 6784.769255207212 7217.00523482584 6800.680884462873 1.053442551912056 1.103082793748952 0.9957141338201447 0.9677990849940952 1.1295797849868587 1.0340652070645353 1.0084515480440819 1.0154708793250222 0.9976602887966683 1.0612180394045718 1.0 12.731463480945942 -7.734501603495647 3.834793598414312 1.0007636640806556 1.0483096789774766 0.061494095701514984 0.045572817454830494 0.25876421531854454 8.181102087113274 0.006421651951948583 0.009448677347055717 1.8428856846827912e-08 7.734501603495647 0.047546014896820976 SSS(ph)PEAMDPPPPK ddPTM_A549_PD325901_60min_R1 2 SSSPEAMDPPPPK 13 0 Q9UK33;K7ERU0;K7ENY2 Q9UK33 ZNF580 Zinc finger protein 580 1 S(0.071)S(0.071)S(0.858)PEAMDPPPPK;S(0.013)S(0.013)S(0.974)PEAMDPPPPK 130.56 1.5014e-08 30693000.0 5788.1 7003.7 5754.9 6291.5 7212.3 6606.4 6110.0 6893.6 6800.2 7118.5 8660.2 True False 6375.703651025985 7593.926378487289 6145.462121024988 6680.1116659667905 6705.732929084256 6552.59966874494 6342.519393520291 6756.10174007542 6514.4112423325005 6669.036695149191 7595.050301530931 0.839455092185609 0.999852019012512 0.8091404107996822 0.8795348813713957 0.8829082972278122 0.8627460528370872 0.8350858969613185 0.8895400914874251 0.8577179852277467 0.8780766986895288 1.0 12.890843804297795 -10.730197084234353 0.8465190605072274 1.0050253267313238 0.8734221359869152 0.0205222273980733 0.05822933786476584 0.4180194855054318 0.4992186069154716 0.03602369869402006 0.008000453568506146 1.861242307231826e-11 10.730197084234353 -0.13160319074440863 SSS(ph)PEDAR ddPTM_A549_MK2206_60min_R1 2 SSSPEDAR 8 0 Q86TL0;K7EKP6;K7EQN3;K7EPJ0;K7ERK1 Q86TL0 ATG4D Cysteine protease ATG4D;Cysteine protease ATG4D, mitochondrial 1 S(0.243)S(0.106)S(0.652)PEDAR;SS(0.005)S(0.995)PEDAR 135.0 0.0010818 14325000.0 2457.18 2621.1 1919.0500000000002 1270.42 315.14 68.814 181.37 153.902 184.304 3958.5 3683.6 True False 2871.891911716778 2754.502794376719 2191.2001465385842 1581.6729570313219 268.78332346343353 76.09585180496367 214.32258130869354 175.7180798051078 142.5594382730104 3064.2721007023524 2768.860457811907 1.0372107787570817 0.9948145947930745 0.7913725447436166 0.5712360666529361 0.09707362561558615 0.02748273268530782 0.07740461629404828 0.06346223743755186 0.05148668213697848 1.1066906936595478 1.0 11.435076632734734 -11.004378022312288 1.324303194913791 0.9954430300779763 0.3669292920578541 0.2913262511730679 0.3754670358607633 0.5307615021925844 1.6764767733644148 0.292671596969932 0.06869277567808074 9.899698717294775e-12 11.004378022312288 -0.6285137380201222 SSS(ph)PEDAR ddPTM_A549_PD325901_60min_R1 2 SSSPEDAR 8 0 Q86TL0;K7EKP6;K7EQN3;K7EPJ0;K7ERK1 Q86TL0 ATG4D Cysteine protease ATG4D;Cysteine protease ATG4D, mitochondrial 1 S(0.028)S(0.152)S(0.82)PEDAR;S(0.016)S(0.073)S(0.911)PEDAR 133.13 0.0010770999999999999 25338000.0 2472.3 2168.2 1979.6999999999998 2174.6000000000004 2406.2 1635.04 1559.5 1988.4699999999998 2098.2 2833.0 2581.5 True False 2723.286075988934 2350.9218232985627 2114.054346903191 2308.920103125069 2237.196812939359 1621.724776335785 1618.847625891144 1948.8084059254622 2010.0199506870474 2654.123896517194 2263.9918654767916 1.2028691964471419 1.03839676243866 0.9337729428890752 1.0198446992382704 0.9881646869204675 0.7163121038839304 0.7150412731497241 0.8607841908102649 0.8878211893503167 1.1723204208413716 1.0 11.144653059237635 -4.777196439014174 0.8827599302004924 0.9109623938921718 1.66077333529702 0.3198018794319437 0.12464753398132426 3.7022044554859814 1.1886621871783578 0.01723441426913364 3.2865511705601316 1.670334921624781e-05 4.777196439014174 0.7498109414048482 SSS(ph)PEDPERDEEVLNHVLR ddPTM_A549_PD325901_60min_R1 4 SSSPEDPERDEEVLNHVLR 19 1 Q8TE67-3;Q8TE67;Q8TE67-2 Q8TE67-3 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 S(0.166)S(0.166)S(0.667)PEDPERDEEVLNHVLR;S(0.157)S(0.157)S(0.686)PEDPERDEEVLNHVLR;S(0.112)S(0.112)S(0.775)PEDPERDEEVLNHVLR;S(0.224)S(0.224)S(0.552)PEDPERDEEVLNHVLR 244.31 8.4777e-86 106015000.0 9253.4 8036.68 7963.610000000001 8648.52 10444.27 8822.73 8535.61 8706.48 10540.19 10678.279999999999 10094.79 True False 10192.798356006952 8713.959228330916 8504.068463677188 9182.719438185977 9710.700505975467 8750.880612046813 8860.437309415016 8532.822426298566 10097.222468798072 10004.051578433333 8853.194826146213 1.1513130069050865 0.9842728415504771 0.9605649294604985 1.0372209827650665 1.0968583315592215 0.9884432438110099 1.0008180643723568 0.9638127923152116 1.1405173688234966 1.1299933837317446 1.0 13.111982454896216 -8.747553028988706 24.99937946221801 1.066355433968668 1.0206030466839977 0.14819338057268916 0.06516011709543937 474.7462740964851 854678.2618483652 0.012085523103138924 0.013668967409801853 1.788327154308181e-09 8.747553028988706 -0.04575238728467035 SSS(ph)PEDPGAEV ddPTM_A549_MK2206_60min_R1 1 SSSPEDPGAEV 11 0 Q9Y5U2-2;Q9Y5U2 Q9Y5U2-2 TSSC4 Protein TSSC4 1 S(0.11)S(0.11)S(0.781)PEDPGAEV 159.34 2.5447e-13 10313000.0 358.81 434.38 282.26 259.71 695.98 303.57 232.26 302.03 524.53 315.75 263.68 True False 419.36835593774055 456.48808661300967 322.2887123118109 323.3389616588247 593.6022639591307 335.6935759065428 274.4586355778637 344.8436774280821 405.7247925022903 244.42185570210128 198.2009788022161 2.1158742932154055 2.3031575796027584 1.6260702356743728 1.631369146675523 2.994951223482523 1.6937029167829183 1.3847491432004722 1.7398686904175187 2.0470372798065815 1.233202061761808 1.0 7.630820276969239 -11.954601640898073 0.34075043435152486 5.053882661619072e-12 2.0245252697790472 0.37805333856551737 0.41520792521896405 4.995656982156266 0.3825953216702971 4.22935253512795 0.14261547628706012 1.1101926789662935e-12 11.954601640898073 2.0245252697739935 SSS(ph)PEDPGAEV ddPTM_A549_PD325901_60min_R1 2 SSSPEDPGAEV 11 0 Q9Y5U2-2;Q9Y5U2 Q9Y5U2-2 TSSC4 Protein TSSC4 1 S(0.049)S(0.049)S(0.903)PEDPGAEV;S(0.093)S(0.093)S(0.815)PEDPGAEV 192.12 2.8188e-19 26847000.0 864.8499999999999 639.43 815.1700000000001 884.5400000000001 1126.07 1045.72 868.45 1101.1 936.8 1147.17 1110.26 True False 952.6489353310803 693.3170101797804 870.4923382154241 939.1760268639053 1046.978727930606 1037.2040030273608 901.4993399840747 1079.1376967037597 897.4295538097537 1074.7374904227433 973.7050585180169 0.9783752554197632 0.7120400619413559 0.8940000163297056 0.9645385105560971 1.0752524275925115 1.0652137358780795 0.925844363339511 1.108279850518813 0.921664672437509 1.1037608165027901 1.0 9.927341026710838 -6.169032822248861 3.596151809165405 0.9856023898744023 0.8382224371365243 0.3448983107251029 0.08939779922849249 0.19547334369936792 4.729637085782228 0.011199788335864583 0.03212827562841205 6.775902960971082e-07 6.169032822248861 -0.14737995273787796 SSS(ph)PELVTHLK ddPTM_A549_MK2206_60min_R1 2 SSSPELVTHLK 11 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.125)S(0.125)S(0.751)PELVTHLK;S(0.005)S(0.151)S(0.844)PELVTHLK 149.93 1.0499e-11 123422000.0 5055.4 6400.299999999999 5466.6 4862.799999999999 6599.0 4976.7 4942.4 5295.9 8173.2 7142.2 8011.1 True False 5908.627927336622 6726.047932108392 6241.846080648147 6054.186218299389 5628.295841642438 5503.331090733904 5840.370104538163 6046.610043013543 6321.983249918446 5528.772059526676 6021.722774887869 0.981218855171666 1.1169640622045474 1.0365548720838245 1.0053910557867096 0.934665385977893 0.9139130605088976 0.9698835902732035 1.004132914957404 1.0498628857978551 0.9181379260073339 1.0 12.555960576168596 -6.1531548557774185 4.367082488714907 1.0036823217211859 1.0545451282363876 0.10769985721721909 0.05460215878127211 0.360049814342051 11.426192539473321 0.007593677516241416 0.02116440777371241 7.028216710571728e-07 6.1531548557774185 0.0508628065152017 SSS(ph)PELVTHLK ddPTM_A549_PD325901_60min_R1 3 SSSPELVTHLK 11 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.312)S(0.312)S(0.377)PELVTHLK;S(0.076)S(0.076)S(0.848)PELVTHLK;SS(0.015)S(0.985)PELVTHLK 187.85 8.249100000000001e-19 415825000.0 11232.1 12397.6 12912.900000000001 13303.2 15714.2 13115.9 12502.1 12306.8 12444.4 13554.3 15378.0 True False 12372.374523365 13442.389261380984 13789.2470455757 14124.908450240697 14610.488803046996 13009.088458962793 12977.874256911624 12061.33121950217 11921.40514456672 12698.479184808692 13486.603489173773 0.9173825369224202 0.9967216187657418 1.0224403095000807 1.0473288149665938 1.0833334586262144 0.9645933810841032 0.9622789212517053 0.8943194058596202 0.8839442157646661 0.9415624323056773 1.0 13.719239440489009 -7.496501298732933 12.928469884060723 0.9413440551768096 1.015806519009795 0.37120014133337087 0.04770550470744717 2.0637505669763057 1009.8479755969546 0.008788515476696276 0.013916744382862405 3.187856042579568e-08 7.496501298732933 0.07446246383298527 SSS(ph)PFLSK ddPTM_A549_MK2206_60min_R1 2 SSSPFLSK 8 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.005)S(0.005)S(0.989)PFLSK;S(0.061)S(0.061)S(0.878)PFLSK 135.43 0.0010827999999999999 19573600.0 7921.6 7623.6 6997.0 6067.8 10248.2 7988.6 7249.200000000001 7841.5 10644.7 10079.5 10860.5 True False 9258.5724154745 8011.608676971632 7989.2798131004765 7554.411272393893 8740.703355708452 8833.94834959649 8566.285804835317 8953.056638586593 8233.692446092944 7802.533949483228 8163.538115448529 1.1341372190023524 0.9813892657413593 0.9786540713249945 0.9253844553133236 1.0707003791857976 1.0821225092192917 1.0493349432183865 1.096712787026007 1.0085936183125863 0.9557784675149438 1.0 12.994978843147068 -5.251367341507661 24.233894711319564 1.014226398663841 1.1341373214185138 0.3031146455910191 0.05198133100268232 861.628602367409 2073064.1865864578 0.006942424086306701 0.12670562803812918 5.605736226136771e-06 5.251367341507661 0.11991092275467286 SSS(ph)PFLSK ddPTM_A549_PD325901_60min_R1 2 SSSPFLSK 8 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.028)S(0.051)S(0.921)PFLSK;S(0.02)S(0.039)S(0.941)PFLSK 160.36 0.00025110000000000003 28849000.0 11351.400000000001 11520.8 11437.900000000001 11421.400000000001 13173.8 12258.400000000001 12010.4 13100.3 12084.5 12876.1 12941.2 True False 12503.785771540986 12491.698248251121 12214.144675680163 12126.873938118582 12248.517735142766 12158.571654659569 12467.462344343057 12839.004239513455 11576.630489980753 12063.100848551034 11349.514441025847 1.1017022654592796 1.1006372398713857 1.0761821344117488 1.068492753688454 1.079210727365325 1.0712856235249297 1.0985018265870554 1.1312381958036415 1.0200110806620883 1.0628737388928058 1.0 13.470342956492189 -8.880617403801075 6.669160427246798 1.0087781429829283 1.0890844278039484 0.5555267490919631 0.023730185575309787 0.06633965128995424 3.634018941146731 0.003257324737215666 0.0034554013870173655 1.3163840035776231e-09 8.880617403801075 0.08030628482102009 SSS(ph)PFLSKR ddPTM_A549_MK2206_60min_R1 1 SSSPFLSKR 9 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.303)S(0.303)S(0.394)PFLSKR 47.843999999999994 0.014039 5118500.0 3331.7 3987.0 3964.7 3754.5 4792.7 3480.2 3241.4 2781.5 5512.4 5330.7 5155.4 True False 3894.00950775555 4189.921270146112 4526.9540767471 4674.352668545909 4087.7001788512985 3848.4724540302077 3830.320422638802 3175.786142986494 4263.850201493959 4126.491167668061 3875.1718981983663 1.0048611029528631 1.0812220412968203 1.1681943912866828 1.2062310502197582 1.0548435750041798 0.9931101265003053 0.9884259390969427 0.8195213596751595 1.1002996288955067 1.0648537087055512 1.0 11.92004459277227 -6.988656144920185 24.361179776315453 1.0212893277741697 1.118251072407424 0.2889980672442367 0.08292458074890702 207.44088169561837 445479.11110146286 0.013002936172544872 0.024557912736417734 1.0264643134517222e-07 6.988656144920185 0.09696174463325424 SSS(ph)PGKLLGSGYGGLTGGSSR ddPTM_A549_MK2206_60min_R1 2 SSSPGKLLGSGYGGLTGGSSR 21 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 SS(0.006)S(0.994)PGKLLGSGYGGLTGGSSR;SS(0.003)S(0.996)PGKLLGSGYGGLTGGSSR 162.07 2.7373999999999997e-28 114039000.0 8721.599999999999 10035.900000000001 9201.2 8535.0 12444.6 9220.5 8557.7 7361.5 16062.8 14627.900000000001 15612.0 True False 10193.592857352343 10546.68444320527 10506.068517407488 10626.075383150715 10614.015825261935 10196.20718992746 10112.523317336976 8405.015168648244 12424.601447020748 11323.447230482232 11735.10953071981 0.8686406233080202 0.8987291013855885 0.8952680407375 0.9054943505498693 0.9044667028864869 0.8688634020190558 0.86173233329137 0.7162280971171042 1.058754621292286 0.9649204552237078 1.0 13.518543686999697 -8.79736421524729 24.999963729708657 1.0277452818991228 0.8697606014851296 0.5649282320031206 0.055011064625083324 75.80118652416036 52749.438730454734 0.009274816254202185 0.009873953617009405 1.5945413456193038e-09 8.79736421524729 -0.15798468041399327 SSS(ph)PGKLLGSGYGGLTGGSSR ddPTM_A549_PD325901_60min_R1 3 SSSPGKLLGSGYGGLTGGSSR 21 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.149)S(0.149)S(0.701)PGKLLGSGYGGLTGGSSR;S(0.014)S(0.014)S(0.972)PGKLLGSGYGGLTGGSSR;SS(0.006)S(0.994)PGKLLGSGYGGLTGGSSR 260.82 9.888899999999998e-100 245004100.0 16970.3 16008.699999999999 17398.1 19621.8 20737.3 24099.2 21216.0 23562.399999999998 23925.399999999998 21409.9 24142.3 True False 18693.11236312544 17357.809331537526 18578.839689274337 20833.794021658916 19280.783587801256 23902.944105264294 22023.38648984067 23092.42944765477 22919.898640819694 20058.07526016361 21172.95015064896 0.8828770780699395 0.8198106172278264 0.8774799712407997 0.9839816309689063 0.9106328334320615 1.1289378161848482 1.0401661711353738 1.0906571490202548 1.0825085062658208 0.9473443765487172 1.0 14.369934682016304 -6.6086907845324 1.248039354593029 1.0482979790347506 0.8494324590495528 0.6313687917734017 0.05801416578291168 0.19390984458092073 0.584345813979392 0.008101846527604034 0.026201634640822386 2.462119997171855e-07 6.6086907845324 -0.19886551998519786 SSS(ph)PGPTGQPR ddPTM_A549_MK2206_60min_R1 2 SSSPGPTGQPR 11 0 F8VVM2;Q00325-2;Q00325;F8VY00;F8VYH5;F8VZL5;F8VWR4;F8VWQ0 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial 1 SS(0.003)S(0.997)PGPTGQPR;SS(0.01)S(0.99)PGPTGQPR 149.96 1.0437e-11 10979000.0 751.24 1270.16 1080.1399999999999 913.11 1581.4099999999999 1267.59 1105.38 1197.85 1655.98 1831.73 1989.9299999999998 True False 878.0309459453972 1334.8057187079983 1233.3200939434541 1136.821990991066 1348.7866838811594 1401.7255324418568 1306.213237729524 1367.6489057617725 1280.9031740566663 1417.9409208082657 1495.7754617259322 0.5870071868489289 0.8923837520156965 0.8245355840510725 0.7600218215101081 0.9017307198801304 0.9371229628439325 0.8732682619504415 0.9143410496811345 0.8563472304717908 0.9479637533110381 1.0 10.546677906032416 -2.1886173477478823 0.17140654295598728 0.9766247208426164 1.262544095370774e-35 0.5622125024166134 0.07050075828823425 31.957129816063144 0.345199545179677 0.08880291243472119 7.997544990607466 0.0064771305749735855 2.1886173477478823 -0.9766247208426164 SSS(ph)PGPTGQPR ddPTM_A549_PD325901_60min_R1 2 SSSPGPTGQPR 11 0 F8VVM2;Q00325-2;Q00325;F8VY00;F8VYH5;F8VZL5;F8VWR4;F8VWQ0 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial 1 S(0.002)S(0.023)S(0.974)PGPT(0.002)GQPR;SS(0.005)S(0.994)PGPTGQPR 124.12 5.471000000000001e-06 12878900.0 1386.69 1750.47 1399.23 1591.37 1783.73 1707.5 1190.98 1642.21 1473.21 1410.92 1896.8 True False 1527.4657479727773 1897.9882501749983 1494.1901620535184 1689.6653106365054 1658.446958334437 1693.5946861198215 1236.3033956292625 1609.454833261178 1411.296106925776 1321.834270410886 1663.5056248058784 0.9182209697373424 1.140956917651831 0.8982176794430027 1.0157256371367422 0.9969590325418758 1.0180877424550063 0.7431915932196094 0.9675078997397392 0.8483867357469659 0.7946076350448988 1.0 10.70001102907092 SSS(ph)PIPLT(ph)PSKEGSAVFAGFEGR ddPTM_A549_PD325901_60min_R1 1 SSSPIPLTPSKEGSAVFAGFEGR 23 1 A0A3B3IRN2;A0A3F2YNX2;A0A3B3ITF3;A0A3B3ITL5;A0A3B3IT59;Q8N5Y2-4;Q8N5Y2-6;Q8N5Y2-2;Q8N5Y2-3;Q8N5Y2 A0A3B3IRN2 MSL3 Male-specific lethal 3 homolog 2 S(0.314)S(0.334)S(0.355)PIPLT(0.974)PS(0.02)KEGS(0.004)AVFAGFEGR 51.568000000000005 0.0045813 3208800.0 912.21 1209.8 928.5 1004.2 1073.0 1055.0 1070.7 1380.5 854.44 824.11 1327.2 True False 1004.8168876664912 1311.754091793469 991.5135935240763 1066.2271532963289 997.6361816490455 1046.408429784135 1111.4460744095206 1352.9648445187 818.5308581951393 772.0755539565079 1163.9628138139824 0.8632723277249603 1.1269725082498259 0.8518430157361833 0.9160319733949224 0.8571031392146191 0.8990050346671692 0.9548810848755734 1.162378066087361 0.7032276705756959 0.6633163403447839 1.0 10.184829252544775 SSS(ph)PIPLTPSK ddPTM_A549_MK2206_60min_R1 2 SSSPIPLTPSK 11 0 A0A3B3IRN2;A0A3F2YNX2;A0A3B3ITF3;A0A3B3ITL5;A0A3B3IT59;Q8N5Y2-4;Q8N5Y2-6;Q8N5Y2-2;Q8N5Y2-3;Q8N5Y2 A0A3B3IRN2 MSL3 Male-specific lethal 3 homolog 1 S(0.007)S(0.24)S(0.753)PIPLTPSK;SS(0.018)S(0.982)PIPLTPSK 162.49 1.5787000000000001e-13 24216000.0 12143.0 12638.0 12414.3 11517.9 16844.9 12903.2 12011.4 12709.5 17604.8 18296.5 17435.0 True False 14192.441532153449 13281.220218737544 14174.834412430087 14339.78601705818 14367.037524304094 14268.608059549038 14193.71590192006 14511.110546211352 13617.340909088753 14163.307942528883 13105.408318479369 1.0829453907316495 1.0134152172893591 1.0816018904533304 1.0941884196647478 1.0962678289119583 1.0887572300536026 1.0830426307210983 1.1072612309034173 1.0390626967255594 1.0807223703635251 1.0 13.677874683224813 -9.209413815101565 1.5277550721075432 1.0117525220127837 1.0796745959788534 0.10455695972004897 0.03210362767419032 0.18278630268236207 0.8818975771719608 0.005678017694831709 0.005120923830685169 6.174278070838046e-10 9.209413815101565 0.06792207396606975 SSS(ph)PIPLTPSK ddPTM_A549_PD325901_60min_R1 2 SSSPIPLTPSK 11 0 A0A3B3IRN2;A0A3F2YNX2;A0A3B3ITF3;A0A3B3ITL5;A0A3B3IT59;Q8N5Y2-4;Q8N5Y2-6;Q8N5Y2-2;Q8N5Y2-3;Q8N5Y2 A0A3B3IRN2 MSL3 Male-specific lethal 3 homolog 1 S(0.027)S(0.192)S(0.781)PIPLTPSK;S(0.001)S(0.013)S(0.986)PIPLTPSK 146.17 1.9835999999999997e-11 57536000.0 33897.0 34937.0 35016.0 33827.0 40535.0 37964.0 39411.0 34704.0 39671.0 38511.0 42819.0 True False 37338.1984863475 37881.26360141217 37392.39632831346 35916.41696330899 37687.96143815846 37654.83377092407 40910.80717152671 34011.80149523865 38003.765829618635 36079.40888767162 37552.5344520049 0.994292370174606 1.0087538472224136 0.9957356240789524 0.9564312365977058 1.0036063341164536 1.0027241655033943 1.08942865690767 0.9057125435490491 1.0120160032924128 0.960771607407323 1.0 15.19662265927163 SSS(ph)PNSPLPMFR ddPTM_A549_PD325901_60min_R1 1 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.004)S(0.021)S(0.649)PNS(0.326)PLPMFR 107.17 0.00013488 5696000.0 2129.5 2301.4 2070.2 1976.7 2468.0 2258.4 2119.3 2464.7 2651.0 2305.7 2306.9 True False 2345.685272344955 2495.3470547640036 2210.6962211238997 2098.79626958858 2294.6561941377854 2240.0083391701337 2199.9511212254583 2415.5396249802534 2539.587689100831 2160.117708506777 2023.165924643971 1.1594131967983494 1.233387249344428 1.0926915060181877 1.0373821761346234 1.1341908076776206 1.1071797482771077 1.0873804735578458 1.1939404452975506 1.2552542815032524 1.0676918201293382 1.0 10.982398928258107 -11.09328081817578 1.4491426520152861 1.000628471072508 1.1556532233334607 0.273818729741535 0.06504834573921722 0.3508659512705474 1.3253517267250503 0.05174714749009425 0.011519441798554181 8.067132345426804e-12 11.09328081817578 0.1550247522609527 SSS(ph)PPILTKPTLK ddPTM_A549_MK2206_60min_R1 1 SSSPPILTKPTLK 13 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 S(0.177)S(0.177)S(0.645)PPILT(0.001)KPTLK 56.407 0.0043873 8334900.0 3391.4 5127.4 4306.6 3712.6 6837.4 4901.7 4092.8 4429.2 6856.6 6251.7 6117.8 True False 3963.785408230685 5388.362759103881 4917.340637858872 4622.187166664946 5831.627517449012 5420.394640514874 4836.408781938696 5057.052663856112 5303.591047740271 4839.436628005783 4598.5814173096105 0.8619582972502178 1.1717445599248149 1.0693168591838809 1.0051332676782627 1.2681361898906625 1.1787101605099042 1.051717550054431 1.0996984080396535 1.1533102421057329 1.0523759805120694 1.0 12.166973168038773 -5.248724480727619 24.155235025099174 1.0932135580622435 0.8619580613709441 0.4343170570158422 0.0787031080523641 1067.497040342402 2027928.6872510505 0.0118047241667289 0.2845144031286818 5.6399534470567245e-06 5.248724480727619 -0.2312554966912994 SSS(ph)PPILTKPTLK ddPTM_A549_PD325901_60min_R1 1 SSSPPILTKPTLK 13 1 A0A3B3IS53;Q92794;A0A3F2YNX6;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 S(0.255)S(0.255)S(0.485)PPILT(0.004)KPTLK 52.323 0.0067793 16304000.0 8811.5 8516.6 9297.8 8911.9 10936.0 10690.0 11058.0 12402.0 10732.0 10642.0 12403.0 True False 9706.036993316542 9234.323771010299 9928.804620213416 9462.367822606599 10167.89308715188 10602.944184258205 11478.818241169787 12154.632380819214 10280.971361535314 9970.062303824914 10877.509629094959 0.8923032315554119 0.8489373106423646 0.9127828849405047 0.8699020405642147 0.9347629589731634 0.9747584277836583 1.0552799889476963 1.1174094802277381 0.9451585622168482 0.9165758196303664 1.0 13.409060673545005 -7.058093850479983 2.4731321878932273 0.9924400566978502 0.8808483612713848 0.5338982710190948 0.05244445221179712 0.1971674934689874 2.384725300933567 0.00813167213940091 0.01569750117143754 8.747947127857433e-08 7.058093850479983 -0.11159169542646541 SSS(ph)PPPR ddPTM_A549_MK2206_60min_R1 2 SSSPPPR 7 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.002)S(0.002)S(0.997)PPPR;S(0.001)S(0.001)S(0.998)PPPR 162.25 0.00085356 334330000.0 27288.0 21415.0 14598.7 11556.2 16703.5 15292.2 13207.400000000001 15610.2 17355.0 37268.0 37744.0 True False 31893.54727245356 22504.932029139447 16669.015179006718 14387.469518777534 14246.437276992656 16910.410453859193 15607.013620645313 17822.993654232527 13424.120210240126 28849.13291624991 28371.123118593925 1.1241552595269344 0.7932337375248327 0.5875345543892884 0.5071166713646329 0.5021456929089916 0.5960430393668982 0.5501020722869007 0.6282089566821434 0.47316139562491266 1.0168484622782772 1.0 14.792135642800208 -10.926683129217343 1.1727087391655342 1.000799612472441 0.6174591222013904 0.3859312950640077 0.17638569160806672 0.41867740946647775 1.0194949655634624 0.12977537217775717 0.030325154087256622 1.1839050437724114e-11 10.926683129217343 -0.38334049027105055 SSS(ph)PPPR ddPTM_A549_PD325901_60min_R1 2 SSSPPPR 7 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.002)S(0.002)S(0.997)PPPR;SS(0.001)S(0.999)PPPR 160.63 0.0011089000000000001 422220000.0 26474.0 23067.0 18538.699999999997 17926.7 19695.5 15871.5 12131.599999999999 13443.7 18877.6 24982.0 30774.0 True False 29161.620990871263 25010.937043643546 19796.847664259316 19033.99154451035 18312.156025786364 15742.247766179056 12593.274676666248 13175.55485712138 18084.240120622344 23404.632256545203 26988.993092458924 1.0805005170429793 0.9267087867250567 0.7335156075085592 0.7052501543612124 0.6785046023411306 0.583283997007567 0.4666077994656634 0.48818252729861206 0.6700598298969263 0.8671917539259648 1.0 14.720083533174748 -5.535057959934147 2.7120230293791003 0.7489841862216008 1.0768375716454157 0.3445359594396358 0.15571032368878363 0.37585938765054366 4.967766929529188 0.028808710332683927 0.20749801537390894 2.9170376869391837e-06 5.535057959934147 0.3278533854238149 SSS(ph)PPPRK ddPTM_A549_MK2206_60min_R1 2 SSSPPPRK 8 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.057)S(0.057)S(0.886)PPPRK;SS(0.002)S(0.998)PPPRK 97.565 0.0010275 284190000.0 32383.0 28735.0 21695.0 16785.1 30501.0 28096.0 26536.0 28981.0 31444.0 43175.0 43324.0 True False 37848.45871166313 30197.488762891528 24771.677225270098 20897.450253511775 26014.343304430375 31069.100071384604 31357.247712452376 33089.14550059018 24321.984205749948 33421.73751366024 32565.45511842844 1.1622272304815755 0.9272859431282167 0.7606734539770664 0.641706070973537 0.7988324809165385 0.9540508480043608 0.9628991088384221 1.0160811627000843 0.746864556853265 1.0262941940199461 1.0 14.99105476874513 -7.256439782280969 24.653667778546403 0.9004507421465704 0.8445467279302724 0.030905008218149455 0.14381618429043475 1326.8662965385724 6542939.055660767 0.023410267888050285 0.0397672307198469 5.540643631949844e-08 7.256439782280969 -0.05590401421629798 SSS(ph)PPPRK ddPTM_A549_PD325901_60min_R1 4 SSSPPPRK 8 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 SS(0.011)S(0.989)PPPRK;S(0.012)S(0.016)S(0.971)PPPRK;SS(0.001)S(0.999)PPPRK;S(0.057)S(0.057)S(0.886)PPPRK 111.61 0.0006287999999999999 374637000.0 65613.7 65336.5 51283.0 55411.299999999996 56986.5 53155.8 38097.5 51002.7 55025.7 69434.40000000001 84516.0 True False 72274.75452174699 70842.63615346668 54763.37276973091 58833.930152807065 52983.96483275239 52722.91678854929 39547.32121025191 49985.41113765588 52713.16118602621 65050.30013425118 74121.06779106574 0.9750905737822992 0.9557692335620369 0.7388368031083852 0.7937544871675294 0.7148300262228395 0.7113081119819527 0.5335503439012624 0.6743752164844139 0.7111764948477989 0.8776222749194135 1.0 16.177596044586767 -4.309372369394795 19.901249285333638 0.812002139987925 0.7774191535452525 0.0 0.14104359279973785 0.0 0.0 0.022207265394122676 0.0 4.904871461372046e-05 4.309372369394795 -0.03458298644267255 SSS(ph)PQPK ddPTM_A549_MK2206_60min_R1 2 SSSPQPK 7 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.002)S(0.113)S(0.885)PQPK;S(0.093)S(0.093)S(0.814)PQPK 86.67 0.013046 7508900.0 4007.1 2978.7 2834.8999999999996 2135.61 2156.08 1504.33 1592.35 1249.9 1748.6000000000001 4164.2 4119.7 True False 4683.400515810927 3130.303106943623 3236.931448071825 2658.834545871177 1838.9234881419054 1663.5172021065634 1881.6593832877443 1427.0771526582134 1352.5448919404137 3223.504327837498 3096.664792064207 1.5124015126897272 1.0108627562678467 1.045296041201191 0.8586123214514358 0.5938400219663739 0.537196407686632 0.6076406423161637 0.4608432776822891 0.43677471820862473 1.0409600471120868 1.0 11.59649950719671 -5.299476692933892 0.8645271785648487 0.6782694179020515 1.881703637500475 0.6068620071029281 0.19834473878148592 1.3079362068277955 0.7378325348690498 0.036601384876412534 1.4709163635022453 5.017915077095633e-06 5.299476692933892 1.2034342195984236 SSS(ph)PQPK ddPTM_A549_PD325901_60min_R1 1 SSSPQPK 7 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.036)S(0.069)S(0.895)PQPK 114.99 0.0073128 31113000.0 7025.3 7195.6 6409.2 7452.2 7625.8 5934.2 5190.7 5814.9 5358.1 7943.7 8904.7 True False 7738.503284247481 7801.998464960398 6844.16685365052 7912.505468825828 7090.190115581814 5885.873842677737 5388.234928960029 5698.917257799197 5132.9176902946665 7442.133426319676 7809.478351544136 0.9909116762859557 0.9990422040695895 0.8763923204034815 1.0131925735169394 0.9078954824402452 0.753683354729314 0.6899609277865064 0.7297436526823041 0.657267676435745 0.9529616565040062 1.0 12.931010468781611 -7.054047335404258 5.038183169035568 0.8080428660411176 0.9652196326560751 0.3841566738505181 0.1025672372202985 0.25054012399490944 13.764012613388436 0.02043087941405256 0.036463737209960594 8.829836554330034e-08 7.054047335404258 0.1571767666149575 SSS(ph)PRGEASSLNGESH ddPTM_A549_PD325901_60min_R1 1 SSSPRGEASSLNGESH 16 1 Q8IY57;Q8IY57-5;Q8IY57-3 Q8IY57 YAF2 YY1-associated factor 2 1 S(0.131)S(0.131)S(0.736)PRGEAS(0.001)S(0.001)LNGESH 68.044 0.0017237 7581400.0 987.99 857.99 820.46 567.26 772.65 994.98 1160.0 834.62 775.63 726.37 2093.0 True False 1088.2900174802032 930.2958284161671 876.1413494267783 602.298361859067 718.3817294977954 986.8772127645677 1204.1444347763563 817.9728493532765 743.0329684259814 680.5068742369201 1835.5742686201513 0.5928880329632747 0.5068145943860363 0.4773118497054311 0.3281253023403026 0.3913662017270603 0.5376394895241307 0.6560042028054484 0.44562231195808155 0.4047959165305463 0.37073241103367327 1.0 10.842015772731983 -10.774086566401236 0.8165833472929938 1.0323052556002776 0.47598769490439774 0.0 0.20497580561470558 0.24630509411738571 0.2635602789081913 0.089541718903812 0.018059168011619085 1.682338692955741e-11 10.774086566401236 -0.5563175606958799 SSS(ph)PSASLTENEVK ddPTM_A549_MK2206_60min_R1 2 SSSPSASLTENEVK 14 0 O96028-5 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 SS(0.002)S(0.998)PSASLTENEVK;S(0.008)S(0.008)S(0.974)PS(0.009)ASLTENEVK 193.06 6.0321e-27 24239000.0 5422.1 7279.3 6669.0 5371.0 7831.4 5735.700000000001 5596.299999999999 5568.4 8646.8 7593.5 8387.1 True False 6337.217922382384 7649.785277595842 7614.7644810014435 6686.895241113352 6679.41143419285 6342.647966950477 6613.075270319467 6357.737752509795 6688.313606102232 5878.1230760852095 6304.351597815792 1.0052132759502148 1.2134134904922165 1.2078584709075644 1.0606793002201997 1.0594922143154264 1.0060745928491603 1.0489699325479618 1.0084681436093283 1.0609042821183177 0.9323913783808864 1.0 12.622132281747014 -6.447418544827099 4.79299770937714 1.030229740116849 1.1489983928361576 0.42866481604422313 0.06186178492579148 0.13892267255563648 5.846327212423813 0.007405300322172159 0.017453577708002335 3.56928687646398e-07 6.447418544827099 0.11876865271930859 SSS(ph)PSASLTENEVK ddPTM_A549_PD325901_60min_R1 2 SSSPSASLTENEVK 14 0 O96028-5 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 SS(0.015)S(0.985)PSASLTENEVK;SS(0.002)S(0.998)PSASLTENEVK 259.68 2.7213999999999995e-70 55695000.0 16761.9 16757.4 18428.6 17579.1 18423.300000000003 20176.2 17940.9 18901.7 17871.9 18789.1 21381.0 True False 18463.5557485414 18169.604908100413 19679.275616174244 18664.921081967215 17129.31096493463 20011.891716597787 18623.650767137187 18524.6907654032 17120.806194206394 17602.753019432133 18751.272545326072 0.9846561455448319 0.9689798313250668 1.049490138261549 0.995394901164701 0.9135012529698561 1.0672284597338402 0.9931939670824796 0.9879164585030071 0.913047695980181 0.9387497822818315 1.0 14.194700886226437 -8.5450761014211 24.844296735117652 0.9584940746733944 0.9961799775502983 0.17445188630104735 0.042411151055074627 352.4446877438572 394470.42865512945 0.007901000056445348 0.008959169392737842 2.850518727347706e-09 8.5450761014211 0.037685902876903876 SSS(ph)PTAGPSTEGAEGPEEK ddPTM_A549_MK2206_60min_R1 2 SSSPTAGPSTEGAEGPEEK 19 0 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 S(0.091)S(0.091)S(0.818)PT(0.001)AGPSTEGAEGPEEK;S(0.076)S(0.076)S(0.845)PT(0.004)AGPSTEGAEGPEEK 221.31 1.3663999999999995e-74 11704900.0 1892.26 2032.2399999999998 2116.56 1870.7800000000002 2989.3 2628.2 2182.7 2867.5 3340.8999999999996 2931.3 3241.5 True False 2211.6272266847313 2135.6723356011375 2416.7200344741964 2329.1211839825046 2549.5779299017654 2906.3143795420337 2579.268336673571 3273.9769063504496 2584.1914843210134 2269.1172941237332 2436.546089151183 0.9076894693402634 0.8765162888197775 0.9918630495990768 0.955910989885645 1.046390191941725 1.1928009047243195 1.0585756403943534 1.3436958656058098 1.0605961840111406 0.9312843718520519 1.0 11.25062179714141 -6.43301879787596 1.5523067240624302 1.0691325923988835 0.905597843986667 0.332806452184392 0.10533271997630962 0.4096591473139312 1.8940748193382149 0.015878724685231514 0.05180179986671805 3.6896162819679034e-07 6.43301879787596 -0.1635347484122165 SSS(ph)PTQYGLTK ddPTM_A549_MK2206_60min_R1 4 SSSPTQYGLTK 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.07)S(0.07)S(0.859)PTQYGLTK;S(0.001)S(0.024)S(0.935)PT(0.04)QYGLTK;S(0.007)S(0.007)S(0.985)PTQYGLTK;S(0.038)S(0.006)S(0.956)PTQYGLTK 229.63 7.804700000000001e-40 372074000.0 19849.6 24159.300000000003 22474.8 19524.1 29111.7 21184.300000000003 20578.4 21179.9 33850.5 30848.3 34894.8 True False 23199.727203873277 25388.905177286444 25662.064591034836 24307.50537647016 24829.407494035815 23426.008564999756 24317.228908875895 24182.2156857234 26183.41579814077 23879.647604925176 26229.45811251355 0.8844912885487769 0.9679538581536271 0.9783680806883304 0.9267254120234202 0.9466229682492069 0.8931182819146263 0.9270961224042457 0.9219487334428214 0.9982446334127348 0.9104133033359417 1.0 14.678900382102215 -8.767562489339657 24.99797353263288 0.9991710831417276 0.9326286305950753 0.03848947863273122 0.03750525836976683 74.58069530946032 304479.5593410748 0.004498304454668749 0.004847959557792917 1.7078019718403093e-09 8.767562489339657 -0.06654245254665236 SSS(ph)PTQYGLTK ddPTM_A549_PD325901_60min_R1 2 SSSPTQYGLTK 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 SSS(1)PTQYGLTK;S(0.322)S(0.061)S(0.616)PT(0.001)QYGLTK 259.27 8.257699999999999e-63 696510000.0 24770.0 25686.0 25584.0 27580.0 29278.0 26958.0 27386.0 26739.0 29521.0 27822.0 29372.0 True False 27284.632165289768 27850.649365024827 27320.28408908989 29283.553961275382 27221.614283616742 26738.46298589641 28428.18921619423 26205.6696686603 28280.335032042844 26065.31417186776 25759.43020444869 1.0592094603310624 1.0811826637459931 1.0605934941981612 1.1368090725942406 1.056763059879932 1.0380067716435217 1.1036031849526176 1.017323343749061 1.0978633769297734 1.0118746402770293 1.0 14.652813061111146 -10.921509205544819 1.010300885219022 0.9970505558849425 1.0741886520051553 0.3997485770114343 0.0312662541610229 0.4313942722442458 0.7304898869275949 0.025324344794464347 0.005109434803696022 1.1980937274669584e-11 10.921509205544819 0.07713809612021283 SSS(ph)PTSYWK ddPTM_A549_MK2206_60min_R1 2 SSSPTSYWK 9 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SSS(0.999)PT(0.001)SYWK;S(0.002)S(0.06)S(0.938)PTSYWK 183.0 5.1996000000000006e-11 72261000.0 11797.2 10683.5 7235.400000000001 6225.0 16814.9 14528.7 11817.1 12805.099999999999 18332.0 13747.6 16255.599999999999 True False 13788.278946151748 11227.244517082016 8261.48851789442 7750.1252794508655 14341.450484563333 16066.117390629464 13964.114106980001 14620.262138974058 14179.831270188522 10642.007611877134 12218.885888263438 1.1284399471637387 0.9188435524932825 0.6761245332383207 0.6342742988454508 1.1737117946521356 1.3148594346119062 1.1428303885211746 1.1965298860035354 1.1604847937739253 0.8709474586467055 1.0 13.5768251265103 -6.780541759753538 24.999911759191964 1.115898875291486 0.8334296046072083 0.4176326966190974 0.16076817508006153 174.67815305905964 228606.72905275147 0.022806763858167142 0.04314848626912042 1.6575179499077995e-07 6.780541759753538 -0.28246927068427774 SSS(ph)PTSYWK ddPTM_A549_PD325901_60min_R1 1 SSSPTSYWK 9 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.001)S(0.001)S(0.998)PTSYWK 217.66 1.4051e-23 35373000.0 11840.0 8363.2 10059.0 8698.4 8116.2 9232.4 8231.1 6861.1 12691.0 11460.0 14338.0 True False 13041.988083852684 9067.99621465295 10741.664229680855 9235.680412500276 7546.146111369973 9157.214395392466 8544.339014730744 6724.249978071179 12157.641404141319 10736.413644224165 12574.516896070581 1.037176075363037 0.7211407237033984 0.8542407090834261 0.7344759634770812 0.6001141971289627 0.728235881432074 0.6794964041442236 0.5347521525993928 0.966847593798253 0.8538231514547643 1.0 13.618215353335193 -8.884018800743624 9.600770268073274 0.9853707577748178 0.7330095667520724 0.31490804950324724 0.12960220291814267 0.18098111369741496 14.51235246438999 0.02093973555203412 0.022266867854737585 1.3061143448104604e-09 8.884018800743624 -0.25236119102274535 SSS(ph)PVGLAK ddPTM_A549_MK2206_60min_R1 1 SSSPVGLAK 9 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.079)S(0.079)S(0.841)PVGLAK 134.59 4.6067e-05 180540000.0 14328.0 16420.0 16678.0 12771.0 20585.0 15734.0 14895.0 13603.0 22258.0 21793.0 22088.0 True False 16746.216114032348 17255.707864509448 19043.1911852065 15899.895573311982 17556.973768784614 17398.96143661608 17601.228695997084 15531.266907440338 17216.598538722243 16869.94616410417 16602.940002212334 1.0086295627040105 1.0393164019270162 1.1469770524177647 0.9576554255567585 1.0574617366830907 1.0479446070574052 1.0601272240730695 0.9354528116930377 1.0369608356368294 1.0160818603124662 1.0 14.019151112148814 SSS(ph)PVGLAK ddPTM_A549_PD325901_60min_R1 2 SSSPVGLAK 9 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.308)S(0.06)S(0.633)PVGLAK;S(0.328)S(0.064)S(0.608)PVGLAK 134.59 4.6067e-05 584730000.0 28054.0 29263.0 28937.0 28491.0 34651.0 31013.0 31521.0 31449.0 32671.0 32607.0 34876.0 True False 30902.02142773674 31729.095708507444 30900.83883231683 30250.824362244253 32217.233299460477 30760.440410327363 32720.548903953048 30821.725023736777 31297.951486462945 30548.188455254574 30586.47309717936 1.0103165974564907 1.0373571221401612 1.0102779334557033 0.9890262360793058 1.053316385877504 1.0056877206010406 1.069771882491757 1.007691371470322 1.023261210503842 0.9987483145963528 1.0 14.900606139974215 -4.95012287774859 15.539067318821575 1.0169929204776775 0.9705822049040563 0.0021409081305310274 0.023783460652208453 5739090.5892797215 47866894.09969757 0.003054022172508876 7941915.80829037 1.1217010392650639e-05 4.95012287774859 -0.0464107155736212 SSS(ph)PVKK ddPTM_A549_MK2206_60min_R1 3 SSSPVKK 7 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.079)S(0.058)S(0.864)PVKK;S(0.063)S(0.063)S(0.874)PVKK;S(0.062)S(0.062)S(0.876)PVKK 87.476 0.0053978 410713000.0 14541.0 11416.699999999999 8478.43 5574.969999999999 14501.0 12517.13 12572.1 15266.4 13212.300000000001 14880.1 15350.499999999998 True False 16995.16530668231 11997.761265331608 9680.798863196447 6940.837900269912 12367.922109358546 13841.684388401567 14856.287834101706 17430.45895138918 10219.735145707611 11518.67507532172 11538.547197752656 1.4729033920312282 1.0397982570690003 0.8389963395982781 0.6015348190127235 1.0718786253929287 1.1996037413702731 1.2875353872102062 1.5106285611748491 0.8857038040021271 0.9982777621748771 1.0 13.49417396726411 SSS(ph)PVKK ddPTM_A549_PD325901_60min_R1 6 SSSPVKK 7 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.002)S(0.01)S(0.988)PVKK;S(0.04)S(0.04)S(0.92)PVKK;S(0.321)S(0.049)S(0.63)PVKK;S(0.02)S(0.211)S(0.769)PVKK;S(0.02)S(0.02)S(0.96)PVKK;S(0.01)S(0.01)S(0.98)PVKK 84.615 0.0058458 452056700.0 56343.5 51542.7 43964.4 41973.2 41989.8 34567.6 27617.500000000004 30794.4 37598.8 48441.4 61780.2 True False 62063.45064210755 55886.38421812138 46948.08856341397 44565.78923594647 39040.58130494601 34286.09292645127 28668.499075375872 30180.181534260555 36018.65318934906 45382.80173693896 54181.62705695494 1.1454704115265375 1.031463749868095 0.8664946239813511 0.8225258571341824 0.7205501832550566 0.6327992492807613 0.5291184601237605 0.5570187381515064 0.6647761454540074 0.8376050001088602 1.0 15.72551609741117 -5.707495199835434 1.5315143084867417 0.7704418354193302 1.167084934317602 0.5166958650884572 0.13326925950743165 0.5080871545799204 1.8642140533071931 0.026493275549682355 0.23555318513883455 1.9611228512301458e-06 5.707495199835434 0.39664309889827176 SSS(ph)PVNVK ddPTM_A549_MK2206_60min_R1 2 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 SS(0.003)S(0.997)PVNVK;S(0.001)S(0.001)S(0.998)PVNVK 121.5 0.0011790999999999998 17732300.0 6667.299999999999 7961.3 8153.0 7760.5 10516.6 7716.9 7434.2 7534.0 11721.7 12009.2 11064.3 True False 7792.577240165258 8366.496164538317 9309.217995742203 9661.82284838208 8969.622071255782 8533.497235936351 8784.897910156524 8601.967571907331 9066.753665708535 9296.313379248371 8316.72895085467 0.9369762181998794 1.0059839888948807 1.1193364663862877 1.1617335259422135 1.078503594894002 1.0260641276591569 1.0562924392592767 1.0342969721314952 1.0901826570621602 1.1177848207128398 1.0 13.02180049880999 -10.983999576711746 1.226316040898425 0.9996312406071554 1.0622424914277058 0.0 0.06631892126576157 0.8174091406390506 2.1655541748662723 0.04328532929940551 0.00969333846306595 1.0375294270530713e-11 10.983999576711746 0.06261125082055041 SSS(ph)PVNVK ddPTM_A549_PD325901_60min_R1 2 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.021)S(0.093)S(0.887)PVNVK;S(0.044)S(0.056)S(0.9)PVNVK 125.18 0.0011023 34173000.0 15552.4 11184.8 10907.3 17951.4 13939.3 20411.8 12412.4 13835.2 14124.7 13442.599999999999 15401.9 True False 17131.26819892824 12127.38234905901 11647.53496892316 19060.217207412585 12960.251655974404 20245.57306831072 12884.760674325897 13559.24608249556 13531.08797896737 12593.831941871531 13507.563940688351 1.268272226890915 0.8978215762894247 0.8622972299126201 1.4110773260897307 0.9594810517190817 1.498832295535223 0.9538922585081084 1.003826163032368 1.0017415455801144 0.9323540497139963 1.0 13.72147989080931 SSS(ph)PVNVKK ddPTM_A549_MK2206_60min_R1 2 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.313)S(0.313)S(0.373)PVNVKK;S(0.279)S(0.279)S(0.443)PVNVKK 49.5 0.012589 21950300.0 5187.1 5200.6 5668.2 5041.7 7272.9 5557.0 5262.6 4789.6 8199.2 7810.7 7981.200000000001 True False 6062.555667580761 5465.288326441401 6472.0359920846295 6276.916726330516 6203.066044352375 6145.038051561936 6218.746299802228 5468.540467534825 6342.094291431913 6046.25744523326 5999.247770085891 1.0105526392509647 0.9109956007639863 1.0788079172785974 1.0462839620709063 1.0339739717507226 1.0243014269560595 1.0365876753433698 0.9115376922424614 1.0571482516617436 1.0078359282611686 1.0 12.550565900983003 -5.759022762820401 24.999999759290734 1.0245971855963807 0.9607741381307772 0.20545450848166114 0.04604809915758186 66.8489737814404 691507.7735068826 0.00613645928186317 0.021726139106020094 1.7417155818840085e-06 5.759022762820401 -0.06382304746560352 SSS(ph)PVQVEEEPVR ddPTM_A549_MK2206_60min_R1 2 SSSPVQVEEEPVR 13 0 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 SS(0.001)S(0.998)PVQVEEEPVR;S(0.335)S(0.041)S(0.624)PVQVEEEPVR 290.39 1.3224999999999995e-115 302850000.0 9140.900000000001 9067.3 8177.400000000001 7127.6 10932.4 8346.0 8026.5 8950.1 11971.1 12810.099999999999 12926.400000000001 True False 10683.660446451579 9528.78684043036 9337.07828264226 8873.862319970121 9324.258442062712 9229.168180373572 9484.811153301147 10218.804083531706 9259.6649639185 9916.28951299916 9716.418129509124 1.0995472100984316 0.9806892533258815 0.9609588799276974 0.9132853487459407 0.9596394800821294 0.9498529249522768 0.9761633378554821 1.0517048512452152 0.9529916107455846 1.0205704798646962 1.0 13.24620885989621 -5.262735198429495 5.0390432297413605 0.9738923777719045 1.105489217544015 0.49526561693712623 0.03564964156653412 0.10043737323524518 8.030380701668765 0.004734940330855945 0.04579086697859576 5.460907264900214e-06 5.262735198429495 0.13159683977211045 SSS(ph)PVQVEEEPVR ddPTM_A549_PD325901_60min_R1 2 SSSPVQVEEEPVR 13 0 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.004)S(0.008)S(0.987)PVQVEEEPVR;S(0.307)S(0.049)S(0.644)PVQVEEEPVR 305.48 9.674299999999997e-135 407450000.0 8912.1 9699.1 9180.3 8438.0 9234.5 8609.7 8655.7 9254.9 9684.3 8727.4 10423.0 True False 9816.849831258742 10516.477195994416 9803.330363628516 8959.19609591159 8585.900577295539 8539.585457736943 8985.09740008078 9070.303759171398 9277.302549060416 8176.350474572599 9141.037076840825 1.0739317375847994 1.1504687167978263 1.0724527513913753 0.980107182653275 0.9392698558294063 0.9342031309961882 0.9829407018646578 0.992262002979002 1.01490700355705 0.8944663943315253 1.0 13.158142137115979 -6.107094274352696 3.9315174215034014 0.993041090870644 1.1124074197910476 0.6257426159695165 0.04261185311449567 0.10046822826943894 2.7230352272861413 0.0048515707763539286 0.01401974586309605 7.814581513665322e-07 6.107094274352696 0.11936632892040366 SSS(ph)PVQVEEEPVRLAS(ph)LRK ddPTM_A549_PD325901_60min_R1 1 SSSPVQVEEEPVRLASLRK 19 2 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.303)S(0.332)S(0.365)PVQVEEEPVRLAS(1)LRK 55.468999999999994 0.0028598000000000004 4086900.0 321.14 191.51 368.32 422.9 170.2 301.27 356.48 317.56 309.45 710.86 452.03 True False 353.74189638922707 207.64921980440346 393.3164100880855 449.02157252441486 158.24573915812448 298.8165570057502 370.0460414733407 311.2260166789994 296.4448926413625 665.9761782838737 396.43317565426037 0.8923115372607829 0.5237937502624647 0.9921379799734695 1.1326538748513273 0.3991738050100395 0.7537627407509302 0.9334386327850307 0.7850655187103404 0.7477802334583112 1.6799203981472244 1.0 8.630933889809556 -10.81951559588485 0.921693292513823 1.007972666384569 0.7912646753140894 0.21360685398621948 0.2844600835796326 1.038399320132117 1.4693571766486488 0.1579688044521734 0.03376670309196323 1.5152503887892595e-11 10.81951559588485 -0.21670799107047956 SSS(ph)PVTELAS(ph)RSPIR ddPTM_A549_MK2206_60min_R1 1 SSSPVTELASRSPIR 15 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.303)S(0.34)S(0.356)PVT(0.006)ELAS(0.561)RS(0.434)PIR 58.848 0.0022544 36350000.0 425.92 695.02 582.92 647.01 795.18 479.06 674.68 567.02 830.94 934.77 874.88 True False 497.8048832557689 730.393549329559 665.5868213023481 805.5274790453828 678.2100753685767 529.7538112257087 797.2606228006248 647.396821425922 642.7334167385151 723.6048077740396 657.623150540363 0.7569759106666594 1.1106566864767478 1.0121097786101987 1.224907423626264 1.031305048812983 0.8055583365494581 1.2123366127629829 0.9844495603507296 0.9773582578569304 1.100333537801186 1.0 9.361117277392081 SSS(ph)PVTELAS(ph)RSPIR ddPTM_A549_PD325901_60min_R1 2 SSSPVTELASRSPIR 15 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.012)S(0.018)S(0.97)PVTELAS(0.673)RS(0.327)PIR;S(0.233)S(0.016)S(0.751)PVTELAS(0.502)RS(0.498)PIR 203.82 2.0695999999999996e-39 100423000.0 4730.7 4927.3 4131.1 4773.4 5563.0 5347.200000000001 4349.2 4981.799999999999 4730.6 4781.3 6021.9 True False 5210.957181442726 5342.540863360858 4411.461288322358 5068.24207682204 5172.274071308144 5303.6541760585105 4514.711185973557 4882.434090853501 4531.789333104636 4479.407902018237 5281.244475969278 0.9866911492459073 1.011606428687498 0.8353071531521391 0.9596681425909288 0.9793665290147102 1.0042432612599552 0.8548574500795028 0.9244855285661469 0.8580911854630451 0.8481727976048906 1.0 12.366662211927297 -7.7277962744607 24.998597807854363 0.925185255454699 0.9598452409445332 0.1555215789437402 0.061966448112522436 489.40851023188566 363655.3367953148 0.010620036071874131 0.01575160435775042 1.871559874588172e-08 7.7277962744607 0.03465998548983418 SSS(ph)PVTELASR ddPTM_A549_MK2206_60min_R1 2 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.004)S(0.004)S(0.993)PVTELASR;S(0.003)S(0.095)S(0.9)PVT(0.002)ELASR 246.56 1.0043999999999998e-50 128733000.0 5975.1 5979.6 5631.9 4652.8 8032.4 6094.0 5260.4 6419.6 8783.6 7898.5 7563.799999999999 True False 6983.550802830444 6283.936099063386 6430.588106245616 5792.736208872131 6850.844600455938 6738.863035130187 6216.146588279492 7329.597959200468 6794.128624526942 6114.223364253507 5685.499709739848 1.2283090597765576 1.105256603618914 1.1310506436627468 1.0188614026219325 1.204967892042934 1.1852718985432045 1.0933333753637504 1.2891739219763056 1.1949923439250023 1.0754065036322507 1.0 12.473071440653966 -10.776712934045161 1.0668871027878555 1.0015215945675329 1.1595989077173494 0.28330236123766694 0.07275460807929994 0.3991565428367594 0.8189086997130763 0.04599860643392095 0.012090567510823403 1.6721955599673612e-11 10.776712934045161 0.15807731314981655 SSS(ph)PVTELASR ddPTM_A549_PD325901_60min_R1 2 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.016)S(0.016)S(0.968)PVTELASR;S(0.048)S(0.057)S(0.895)PVTELASR 246.56 1.0043999999999998e-50 151314000.0 8477.400000000001 8885.3 8468.900000000001 8893.3 9645.5 8619.3 8818.1 8086.7 7601.9 8769.4 10070.0 True False 9338.019407267968 9634.095413963056 9043.650481632789 9442.618942850262 8968.033355168562 8549.107278519807 9153.677620949478 7925.404424606576 7282.418579319353 8215.69858740483 8831.453838989459 1.0573592499620055 1.0908844217052986 1.0240273738063959 1.0692032268982268 1.0154651225799456 0.9680294359663483 1.0364859272136433 0.8974065390702922 0.8246001974407245 0.9302770231480837 1.0 13.108435239370422 -7.67105707100971 1.1745541318935955 0.915958283597069 1.0565356278133782 0.5746696249431854 0.050126933231559104 0.3223147614924824 0.898157290734619 0.012220434943228917 0.021040317113533095 2.1327646263049947e-08 7.67105707100971 0.14057734421630919 SSS(ph)PVTELASRS(ph)PIRQDR ddPTM_A549_MK2206_60min_R1 3 SSSPVTELASRSPIRQDR 18 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.035)S(0.042)S(0.921)PVT(0.041)ELAS(0.345)RS(0.616)PIRQDR;S(0.064)S(0.082)S(0.854)PVTELAS(0.248)RS(0.752)PIRQDR;S(0.008)S(0.011)S(0.981)PVTELAS(0.004)RS(0.996)PIRQDR 170.18 9.4219e-31 236881000.0 17934.71 18747.34 16183.91 15201.120000000003 21404.95 19495.29 16140.74 17601.61 24491.629999999997 25083.8 25553.699999999997 True False 20961.650586438936 19701.499529636585 18479.031793630835 18925.395082404222 18256.310209965803 21558.26864787386 19073.303528877335 20096.69212016988 18944.31491009642 19417.352158544298 19208.011043758317 1.0912972997925503 1.0256918056093387 0.9620481658165037 0.9852865577435238 0.950452921355344 1.1223581972522483 0.9929869097547841 1.0462661685474375 0.9862715544539638 1.0108986356947147 1.0 14.229420517716608 -9.907296212889573 0.003898344285343676 9.107172064686019e-09 2.0012455621316754 0.0025096715924876056 0.05024237585970053 39443.06653708125 53.698681210455355 13943.027512228997 13622.901798007188 1.2379519467272956e-10 9.907296212889573 2.0012455530245035 SSS(ph)PVTELASRS(ph)PIRQDR ddPTM_A549_PD325901_60min_R1 2 SSSPVTELASRSPIRQDR 18 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.061)S(0.084)S(0.854)PVTELAS(0.254)RS(0.746)PIRQDR;S(0.097)S(0.117)S(0.786)PVTELAS(0.287)RS(0.713)PIRQDR 180.31 5.0303e-32 335550000.0 2142.6800000000003 2963.41 2758.56 2853.25 2765.66 3057.0299999999997 2605.73 2880.17 3470.4 3177.0200000000004 2863.7 True False 2360.203296242354 3213.146960788299 2945.7724701688458 3029.4887722990948 2571.4095826090374 3032.134561235066 2704.8924810601698 2822.7227499003434 3324.5511566410864 2976.422415006374 2511.483054489979 0.9397647704701132 1.2793822976603004 1.17292149947118 1.206254912563728 1.0238610123257343 1.207308389285875 1.0770100464044212 1.1239266555487748 1.3237402301789456 1.1851254220828549 1.0 11.294323825534562 -5.236663940991337 23.170372275191767 1.154853138221193 0.9397640556928609 0.30718087686487805 0.09478270471561814 3343.3546447823674 3126625.566325762 0.016544151244672317 1.3336411843419715 5.798772344565632e-06 5.236663940991337 -0.21508908252833214 SSS(ph)QENLLDEVMK ddPTM_A549_MK2206_60min_R1 2 SSSQENLLDEVMK 13 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.019)S(0.019)S(0.962)QENLLDEVMK;S(0.01)S(0.01)S(0.98)QENLLDEVMK 155.57 8.6146e-19 8571400.0 3127.6 3826.8 3899.6000000000004 3362.8 5571.9 4466.9 4349.6 4756.6 7476.6 6967.5 8090.799999999999 True False 3655.4624175214644 4021.567774415636 4452.621917845741 4186.686150961831 4752.280891051299 4939.584393111753 5139.866017865654 5430.862616476567 5783.1620376768215 5393.53691086109 6081.631065279776 0.6010661249069539 0.6612646724617831 0.7321427212620477 0.6884150166332441 0.7814155183109053 0.8122137532005184 0.8451459752646476 0.8929944217566129 0.9509228651986269 0.8868569719154724 1.0 12.570242584352828 -7.204894772301376 0.3722014790814049 1.0045983863110857 0.5722412277257974 0.8876157423974841 0.04006698880097618 0.18706325345060038 0.04512185377750242 0.00827124718508438 0.03059812478971116 6.238859820801953e-08 7.204894772301376 -0.4323571585852882 SSS(ph)QENLLDEVMK ddPTM_A549_PD325901_60min_R1 2 SSSQENLLDEVMK 13 0 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;A0A2U3TZV9;A0A2R8Y7D4;A0A2R8YDS8;H0Y7U8;Q3V6T2-5;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.035)S(0.035)S(0.93)QENLLDEVMK;SSS(1)QENLLDEVMK 201.16 4.9806e-31 42130000.0 7524.5 8397.599999999999 8138.4 8649.6 8827.1 8474.900000000001 9038.5 9152.400000000001 9720.1 7624.299999999999 10129.5 True False 8288.381700755866 9105.295223379757 8690.720764174837 9183.866147333121 8207.11494784183 8405.883224244142 9382.465063556976 8969.848202081102 9311.597999558277 7142.900396828821 8883.635716191033 0.9329943241199912 1.0249514404091036 0.9782842342730697 1.0337958962674367 0.9238464081641486 0.9462210622756453 1.056151486092208 1.0097046399294538 1.0481742269763779 0.8040514745342829 1.0 13.116934519372743 -7.760325898626822 24.999983331580236 1.0244183881234006 0.97641627773386 0.0 0.07517134650974794 29.172185285634942 654962.1456324807 0.005573043685089295 0.008006500809352762 1.73649725597902e-08 7.760325898626822 -0.04800211038954061 SSS(ph)QGPLSSIR ddPTM_A549_MK2206_60min_R1 1 SSSQGPLSSIR 11 0 A0A0U1RQE4 A0A0U1RQE4 1 S(0.182)S(0.182)S(0.635)QGPLSSIR 159.66 2.4464e-13 22981000.0 5529.5 6395.8 6377.6 6115.0 8126.2 6937.5 5580.2 5649.9 9733.9 8975.9 10038.0 True False 6462.744416704484 6721.318901329452 7282.039579252483 7613.175274512781 6930.846744712049 7671.6216452602 6594.050108721244 6450.790627093078 7529.1871918442175 6948.2379559667115 7545.287565293714 0.8565272510528776 0.8907969170380868 0.9651109406019063 1.008997365392849 0.9185662818991914 1.016743441369629 0.8739295953479752 0.8549429788156748 0.9978661683454514 0.9208711922295355 1.0 12.881360170320255 -2.0000000136204537 0.08555683265712545 1.0597747006060672 0.6195678598587523 0.0 0.062011686728808454 158.6731991960621 0.953535195226858 0.670341363979164 8.232505079611743 0.00999999968637747 2.0000000136204537 -0.44020684074731486 SSS(ph)QGPLSSIR ddPTM_A549_PD325901_60min_R1 2 SSSQGPLSSIR 11 0 A0A0U1RQE4 A0A0U1RQE4 1 S(0.032)S(0.032)S(0.936)QGPLSSIR;S(0.011)S(0.027)S(0.962)QGPLSSIR 143.76 2.5811999999999997e-11 71788000.0 8252.900000000001 9612.2 9543.099999999999 9363.8 10576.7 9144.6 8942.9 9952.5 10422.9 10406.0 11026.0 True False 9090.728332536131 10422.253828018833 10190.752153322142 9942.18065926724 9833.829079634168 9070.129409482468 9283.226953242647 9753.989579914794 9984.861759611103 9748.96338410093 9669.871899572765 0.940108455101435 1.0778068144293937 1.0538663034173588 1.0281605343403264 1.0169554655701951 0.937978238355278 0.9600155048230576 1.0086989446412156 1.0325743570659147 1.008179165696255 1.0 13.239281062567386 -5.207251923709193 22.39361529013253 1.0131634151567743 0.9401068751477704 0.23867386062886953 0.037108114534767936 22772.919882598184 9410094.81364915 0.005339855788868947 9.455581437732627 6.205089875796603e-06 5.207251923709193 -0.07305654000900397 SSS(ph)QIPEGFGLTSGGSNYSLAR ddPTM_A549_MK2206_60min_R1 2 SSSQIPEGFGLTSGGSNYSLAR 22 0 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 S(0.111)S(0.111)S(0.778)QIPEGFGLTSGGSNYSLAR;S(0.194)S(0.194)S(0.612)QIPEGFGLTSGGSNYSLAR 106.73 4.6996e-10 6358800.0 1173.29 1203.19 1954.83 1613.31 2345.98 1607.3899999999999 2036.92 2255.83 2911.3199999999997 3114.0 3060.64 True False 1371.3126678135818 1264.4272317599962 2232.0542885584136 2008.571022424237 2000.8894497009144 1777.482942900872 2407.001997680453 2575.600810689638 2251.9106684227168 2410.5452372330747 2300.598618633248 0.5960677611065675 0.5496079244414978 0.9702058718458435 0.8730645172765946 0.8697255720728954 0.7726175824433246 1.0462503011978759 1.1195350591924482 0.9788368341108298 1.0477904392836437 1.0 11.167793585729905 -4.809894718835618 0.4839351280230766 0.9985609175339497 8.588715424367262e-12 0.665424123125405 0.10244669077387732 2.7063497234905687 0.3086171130968369 0.019670307535588384 1.6919519763342261 1.549192126753364e-05 4.809894718835618 -0.998560917525361 SSS(ph)QPSSCCSDPSKPGGNVEGATQSLAEQMR ddPTM_A549_MK2206_60min_R1 1 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.123)S(0.123)S(0.662)QPS(0.031)S(0.031)CCS(0.031)DPSKPGGNVEGATQSLAEQMR 83.59 1.2248000000000001e-06 11993000.0 1236.8 663.18 910.12 622.28 1041.8 607.57 696.34 914.12 1007.1 1147.2 1245.2 True False 1445.5416031431598 696.9330293291945 1039.1887013718745 774.7386279352104 888.5526000641153 671.862654127675 822.8559644290436 1043.699309375091 778.9934580082295 888.0467232349972 935.9824742283053 1.5444109723688721 0.7446005117818032 1.110265127804514 0.8277277078013278 0.9493261086931197 0.7178154213641761 0.8791360811616353 1.115084243682656 0.8322735515432493 0.9487856318753939 1.0 9.870337706142562 -5.251691211821658 24.89789688723908 0.9158147536330036 1.5444113302560858 0.6791824275236924 0.12483385267603228 531.8863628117311 1358467.9333835067 0.0161440822506596 0.2920384908208246 5.60155736861196e-06 5.251691211821658 0.6285965766230822 SSS(ph)QPSSCCSDPSKPGGNVEGATQSLAEQMR ddPTM_A549_PD325901_60min_R1 2 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.248)S(0.248)S(0.488)QPS(0.006)S(0.006)CCS(0.006)DPSKPGGNVEGATQSLAEQMR;S(0.231)S(0.231)S(0.272)QPS(0.086)S(0.086)CCS(0.086)DPS(0.008)KPGGNVEGATQSLAEQMR 94.48 7.3004e-10 17254000.0 3054.3999999999996 2371.78 2745.6 2601.2 2956.9 1803.1999999999998 2255.3999999999996 3035.4 1713.7 2704.5 2479.6000000000004 True False 3364.4804394695643 2571.658224362634 2931.9329266340364 2761.8702162461764 2749.217544751224 1788.5153370490534 2341.230481202236 2974.856565774765 1641.6791485522801 2533.7374084471435 2174.6249194794705 1.5471543664067382 1.1825755335215231 1.3482476450862335 1.270044406971696 1.2642260833694903 0.8224477338727277 1.0766134703186632 1.3679860554926604 0.754925198293617 1.1651376684553179 1.0 11.08655087023442 -6.933860066675853 0.5251733658840231 0.9015376183107756 1.4433539334551295 0.2739894429251918 0.19268543756511133 0.7785179071216851 0.35410928197644287 0.04290430493307645 0.19196111928303294 1.1645011810150039e-07 6.933860066675853 0.5418163151443539 SSS(ph)SASDGESEGKR ddPTM_A549_MK2206_60min_R1 1 SSSSASDGESEGKR 14 1 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 S(0.018)S(0.072)S(0.354)S(0.311)AS(0.243)DGES(0.002)EGKR 44.005 0.026343000000000002 10444000.0 2462.9 2377.6 2313.0 1800.9 1024.5 545.12 609.25 413.74 940.45 3128.3 3479.1 True False 2878.577307876205 2498.60968444931 2641.01818032034 2242.1205808454733 873.7974071469431 602.8042365786293 719.9428387402634 472.3889120256092 727.4395765900501 2421.6148573012933 2615.1434517247817 1.1007339983501399 0.9554388623696289 1.0098941909203845 0.8573604554529174 0.33412981860350416 0.2305052276122972 0.2752976469667219 0.18063594626675322 0.2781643110668661 0.9259969489261289 1.0 11.352674371254995 -6.583093777396216 5.360192687621465 0.5342153645012861 1.0040196751786974 0.4639260168898699 0.26512690868821004 0.20051438929746646 11.59225410451283 0.049636049692578565 0.10555677793142919 2.6115973701556147e-07 6.583093777396216 0.46980431067741124 SSS(ph)SERPEPQQK ddPTM_A549_MK2206_60min_R1 1 SSSSERPEPQQK 12 1 P78362;C9J2M4 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 S(0.119)S(0.119)S(0.748)S(0.013)ERPEPQQK 77.562 0.00029607 10887000.0 2752.3 3041.1 2889.3 2295.0 3358.1 2598.2 3227.4 2908.9 3677.8 4496.2 4631.9 True False 3216.820952725516 3195.879000411676 3299.046186078494 2857.2751030264662 2864.12793844817 2873.1397994544227 3813.776803857733 3321.245483132633 2844.784172239766 3480.5052972534845 3481.671396063355 0.9239300860967811 0.9179151725878502 0.9475466839888017 0.8206619114765169 0.8226301717291795 0.8252185438014096 1.0953867754923343 0.9539227300106173 0.8170742866360959 0.999665074994961 1.0 11.765564330947775 SSS(ph)SLVR ddPTM_A549_PD325901_60min_R1 1 SSSSLVR 7 0 H0Y9P2;P22455-3;P22455-2;P22455 H0Y9P2 FGFR4 Fibroblast growth factor receptor 4 1 S(0.042)S(0.132)S(0.413)S(0.413)LVR 63.673 0.029641000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSS(ph)SPPPK ddPTM_A549_PD325901_60min_R1 1 SSSSPPPK 8 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.047)S(0.047)S(0.52)S(0.387)PPPK 59.245 0.012925 16111000.0 4212.8 5045.0 6237.9 5905.9 5669.4 6043.0 5318.5 5529.8 5349.1 5231.6 7961.0 True False 4640.480354700555 5470.159855429039 6661.2414055399395 6270.694029727925 5271.200902368221 5993.7878115502635 5520.898427894869 5419.503800955823 5124.29592899632 4901.27588316956 6981.847468936947 0.6646493460859167 0.7834831510952392 0.9540800533349632 0.8981425127986502 0.7549865455841607 0.858481632292502 0.7907503640630922 0.7762277570611256 0.7339455569310143 0.7020027156101458 1.0 12.769393123619212 -10.900392269055052 1.138864353899849 1.0005535735466073 0.8019448966014346 0.0 0.11507607517949374 0.3597894496454831 0.825018366746159 0.056456100012406495 0.013316780742460491 1.2577888223502719e-11 10.900392269055052 -0.1986086769451727 SSS(ph)SPTEATEK ddPTM_A549_PD325901_60min_R1 1 SSSSPTEATEK 11 0 E7EME3;Q9UBG0 E7EME3 MRC2 C-type mannose receptor 2 1 S(0.046)S(0.046)S(0.883)S(0.026)PTEATEK 71.153 0.0020655 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSS(ph)SSASPS(ph)SPSSR ddPTM_A549_PD325901_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.069)S(0.094)S(0.819)S(0.017)S(0.005)AS(0.038)PS(0.556)S(0.402)PSSR 123.76 1.7331000000000002e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSS(ph)SSASPSS(ph)PSSR ddPTM_A549_MK2206_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.121)S(0.143)S(0.601)S(0.129)S(0.112)AS(0.113)PS(0.157)S(0.554)PS(0.058)S(0.012)R 68.044 0.003993399999999999 4284000.0 963.42 1060.9 778.58 636.25 1102.4 843.77 679.74 1079.7 1589.1 1323.8 1372.0 True False 1126.0217426424506 1114.8952785297254 888.9943514197184 792.1312785623476 940.2384203404499 933.0571813508042 803.2399593029241 1232.7507814425737 1229.1713872712512 1024.7526605809708 1031.2945347263376 1.0918527197870294 1.081063887171255 0.8620179022432426 0.7680941301337799 0.9117069747586221 0.9047436497841992 0.7788657190121447 1.1953430760395662 1.1918722982444796 0.9936566384043694 1.0 10.010240705733558 -8.268770997228447 24.986658268309462 1.1009932643290055 0.9124100567171102 0.3719994755552677 0.1131311789277318 488.56460229612077 1665059.4697840484 0.020534622139652247 0.02508084163718052 5.3855368613855e-09 8.268770997228447 -0.1885832076118953 SSS(ph)T(ph)RSGGGDLTLGLEPSEEEAPR ddPTM_A549_MK2206_60min_R1 1 SSSTRSGGGDLTLGLEPSEEEAPR 24 1 B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626 B4DTR1 ERBB2 Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2 2 S(0.301)S(0.339)S(0.38)T(0.547)RS(0.43)GGGDLT(0.004)LGLEPSEEEAPR 80.439 9.4006e-06 2094900.0 0.0 301.1 308.35 203.74 692.01 444.91 392.98 580.37 447.81 538.66 545.97 True False 0.0 316.4247038979169 352.07866662420065 253.65630914623623 590.2162457001037 491.9900808926438 464.37937918448677 662.6392248085825 346.3817500056256 416.9763318843824 410.3905809945614 0.0 0.771033056195094 0.8579111776175645 0.6180851142624001 1.4381817542443194 1.1988337541771306 1.1315546717936025 1.6146550517867855 0.8440294832454157 1.0160475195942869 1.0 8.680853809344509 -5.418436659638887 1.5911314546012485 1.0225176062838313 2.167844337327867e-25 0.5590971702472773 0.272020383213489 0.5275010564408837 1.5694287595150018 0.04042767144945207 0.7559813975011321 3.81560439503346e-06 5.418436659638887 -1.0225176062838313 SSS(ph)TEPPPPVR ddPTM_A549_MK2206_60min_R1 2 SSSTEPPPPVR 11 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 SS(0.002)S(0.982)T(0.016)EPPPPVR;S(0.002)S(0.002)S(0.995)T(0.002)EPPPPVR 193.3 1.3102999999999998e-19 29647000.0 4400.9 5033.5 3692.3999999999996 4196.7 5435.799999999999 5063.5 4252.9 5244.2 5663.9 6240.9 6257.9 True False 5143.664328325299 5289.68365018321 4216.037842202691 5224.8916883970205 4636.20102076072 5599.316209120728 5025.596879570726 5987.581409688936 4381.0356933897465 4831.076355506709 4703.890720746313 1.0934914592380693 1.1245337028883946 0.8962873698591748 1.1107595814998115 0.9856098485266569 1.1903584801460583 1.0683915035282476 1.2728997685428702 0.9313642585418433 1.0270383906240528 1.0 12.19963882900544 SSS(ph)TEPPPPVR ddPTM_A549_PD325901_60min_R1 2 SSSTEPPPPVR 11 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 S(0.003)S(0.332)S(0.544)T(0.121)EPPPPVR;S(0.013)S(0.013)S(0.644)T(0.33)EPPPPVR 199.03 5.8106e-24 36422000.0 6256.1 6299.8 5850.7 5788.299999999999 6678.4 5213.2 5519.6 5867.6 6303.6 6570.8 6953.4 True False 6891.214666502594 6830.706255150025 6247.76368511719 6145.830144816904 6209.3322232292485 5170.745427630954 5729.651398441013 5750.56611495685 6038.681613359486 6155.918566620258 6098.17588123429 1.130045246433232 1.1201228675889665 1.0245299261281102 1.0078145111769012 1.0182278019131945 0.847916742372537 0.93956807905011 0.9429977466955114 0.9902439239153656 1.0094688455220944 1.0 12.574162045263156 -5.866636953706414 1.4619171035051346 0.9779298447726583 1.1444313117663334 0.6231500261013095 0.04625997090044333 0.2830091934865578 1.0134744216156308 0.0071905612845822595 0.04923532159631168 1.3594493966288098e-06 5.866636953706414 0.16650146699367507 SSS(ph)TGNLLDKDDLAIPPPDYGAASR ddPTM_A549_MK2206_60min_R1 2 SSSTGNLLDKDDLAIPPPDYGAASR 25 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.093)S(0.093)S(0.682)T(0.131)GNLLDKDDLAIPPPDYGAASR;S(0.087)S(0.108)S(0.782)T(0.023)GNLLDKDDLAIPPPDYGAASR 201.63 1.2409e-68 42919000.0 9966.400000000001 10320.8 9575.2 9354.7 14634.2 12095.9 11175.7 11072.4 17449.4 17121.5 17584.8 True False 11648.48466491429 10846.084636298969 10933.10734120333 11646.601919948436 12481.528565807525 13375.880109391413 13206.180029396073 12641.946607802865 13497.138760965952 13253.741258601822 13218.00884420968 0.8812586526613695 0.8205535920071831 0.8271372390549366 0.8811162147958753 0.9442820558616299 1.0119436495346945 0.9991050985853449 0.9564183801663012 1.0211173952178545 1.0027033129432195 1.0 13.690217245733976 -6.838634038249859 1.895645009153677 1.005188169081892 0.8408906561281184 0.9057798404389534 0.022093900801053487 0.06611274846914635 0.4821124732577785 0.0033796937240813544 0.007633449223113569 1.4499931873505601e-07 6.838634038249859 -0.1642975129537736 SSS(ph)TGNLLDKDDLAIPPPDYGAASR ddPTM_A549_PD325901_60min_R1 2 SSSTGNLLDKDDLAIPPPDYGAASR 25 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L3C6;Q9UQB8-6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.017)S(0.05)S(0.865)T(0.068)GNLLDKDDLAIPPPDYGAASR;S(0.16)S(0.16)S(0.649)T(0.031)GNLLDKDDLAIPPPDYGAASR 235.82 1.8963999999999996e-111 153336000.0 25256.0 26961.0 27082.0 26672.0 28402.0 29138.0 29276.0 29099.0 28096.0 27854.0 28627.0 True False 27819.970527515492 29233.09808963774 28919.947377295648 28319.468863493013 26407.141501580776 28900.70978867311 30390.114200441913 28518.597617276093 26915.22282647187 26095.293686406632 25106.060481504577 1.1080978056278574 1.1643841179771521 1.1519110056554165 1.1279933338946477 1.0518233842794529 1.1511447528760643 1.2104692499577963 1.135924835291682 1.0720607817502903 1.0394021676810192 1.0 14.615748045367596 -9.287543239707654 1.103617721807803 1.0175699729092313 1.1383370742669225 0.5675591506519626 0.03936018377933863 0.20784946371250992 0.5294160024703886 0.010462339216727696 0.008660693607733597 5.157708107718077e-10 9.287543239707654 0.1207671013576912 SSS(ph)TKGKLELVDNK ddPTM_A549_PD325901_60min_R1 1 SSSTKGKLELVDNK 14 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.1)S(0.1)S(0.778)T(0.022)KGKLELVDNK 85.63600000000001 3.3087e-05 22285000.0 2550.4 3284.7 3214.0 3939.5 3370.3 3790.2 3327.9 4350.2 3734.1 3760.1 3844.6 True False 2809.3147304947547 3561.513196655654 3432.1213673520524 4182.833967746351 3133.5817549037997 3759.3338678368027 3454.5450555967536 4263.431848334121 3577.1687626825405 3522.6866442973187 3371.7385729273933 0.8331947064495175 1.0562839080265631 1.0179085042089233 1.2405570234096628 0.9293667605383704 1.1149541361306945 1.0245589866706262 1.2644609764726056 1.060927081181383 1.044768616577195 1.0 11.719276966208298 -5.261353023560754 9.556805809152722 1.0567841555302238 0.8324838603834152 0.3273599028270475 0.09651041625631371 0.070956689904749 167.73899016076032 0.012563598651844237 0.1011662799135191 5.478314698737819e-06 5.261353023560754 -0.2243002951468086 SSS(ph)TSDILEPFTVER ddPTM_A549_MK2206_60min_R1 2 SSSTSDILEPFTVER 15 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SS(0.006)S(0.918)T(0.07)S(0.006)DILEPFTVER;S(0.003)S(0.003)S(0.874)T(0.117)S(0.002)DILEPFTVER 337.22 3.638199999999999e-186 50303000.0 6403.200000000001 6426.4 7366.6 7219.6 11383.3 9099.2 7922.9 8967.1 14484.300000000001 14282.199999999999 13653.2 True False 7483.903616790334 6753.476310626282 8411.294650734033 8988.402324100156 9708.831649366324 10062.071304439884 9362.38837432126 10238.213885592013 11203.629176674216 11055.841100581316 10262.733630849581 0.7292310105656317 0.6580582282994719 0.8195959237848522 0.8758292524597141 0.9460278322124391 0.9804474778721226 0.9122704253161261 0.9976107978498182 1.091680791850265 1.0772803327319798 1.0 13.3251274448394 -6.251381827586625 0.5803131846328072 1.0387714172773226 0.6140004576073446 0.8700693743529667 0.047119997168623785 0.4080173131553888 0.17245447870965133 0.01013637943399667 0.09382778694581469 5.6055492475158e-07 6.251381827586625 -0.424770959669978 SSS(ph)TSDILEPFTVER ddPTM_A549_PD325901_60min_R1 2 SSSTSDILEPFTVER 15 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 S(0.001)S(0.003)S(0.936)T(0.056)S(0.003)DILEPFTVER;SSS(0.933)T(0.063)S(0.004)DILEPFTVER 346.5 4.3604999999999984e-210 121692000.0 11576.9 11487.8 11453.8 12500.8 13625.7 13928.2 12316.7 14628.0 14774.400000000001 13866.2 13792.099999999999 True False 12752.178365536667 12455.917222437603 12231.123745294632 13272.946024623323 12668.677838113132 13814.77335707999 12785.418758456852 14336.233064556001 14153.483347359977 12990.6857655795 12095.75913532537 1.054268543451253 1.0297755670465032 1.0111910801508879 1.0973222826387148 1.047365253919001 1.1421171009212874 1.057016646530051 1.1852280542431919 1.1701194765052054 1.073986809777033 1.0 13.562213695903328 -6.270130857665784 23.667545966536093 1.0907326022604629 1.0315481145668846 0.22677687626933396 0.05255261133606916 488.4427473069142 1330070.5379751516 0.009893891074567902 0.023364809398071954 5.36870007206345e-07 6.270130857665784 -0.059184487693578314 SSS(ph)TSESGDSDNMR ddPTM_A549_PD325901_60min_R1 1 SSSTSESGDSDNMR 14 0 O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7 O75179-4 ANKRD17 Ankyrin repeat domain-containing protein 17 1 S(0.091)S(0.091)S(0.602)T(0.091)S(0.108)ES(0.017)GDSDNMR 56.122 0.0052006 5750200.0 541.4 298.21 424.65 567.37 534.45 559.43 371.81 400.12 456.51 667.17 563.72 True False 596.3625294423854 323.34120326808613 453.4693026278934 602.4151563092393 496.91207575240674 554.8741875584253 385.9594330122386 392.13929271193246 437.32447225628823 625.0447723400551 494.3860137155054 1.2062690142880184 0.6540257901675854 0.9172373207322213 1.2185117288853953 1.0051094933246938 1.1223500911531203 0.780684368701294 0.7931844385419632 0.8845809956669745 1.2642849008664259 1.0 8.94949411944764 -7.75198089284431 24.99834537236532 0.9190283767767389 1.0075179066778224 0.02845400827195821 0.18883393272247578 474.2852856969013 1253510.5495418035 0.02465121173718623 0.036295319694312496 1.7701868374820966e-08 7.75198089284431 0.0884895299010835 SSS(ph)VGS(ph)SSSYPISPAVSR ddPTM_A549_MK2206_60min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.056)S(0.003)S(0.941)VGS(0.756)S(0.139)S(0.014)S(0.091)YPISPAVSR;S(0.261)S(0.004)S(0.735)VGS(0.645)S(0.331)S(0.019)S(0.005)YPISPAVSR 253.53 1.6724999999999997e-86 77923000.0 9506.6 11745.6 8773.7 9099.5 15592.9 13703.699999999999 13264.2 14263.2 20694.1 18602.8 21376.4 True False 11111.081665944992 12343.400870486124 10017.94258913816 11328.877908492082 13299.20506578972 15153.816438220143 15674.133445414192 16285.052279218038 16006.919391687123 14400.414559794284 16068.04992137323 0.6915015649263929 0.7681953274284585 0.6234697202311152 0.7050561806770811 0.8276800937803612 0.9431023996299015 0.9754844876704633 1.0135052080934948 0.9961955227930434 0.8962142033576391 1.0 13.971907228321152 -7.116209785273967 1.7229380017360865 0.9979380628300838 0.6937545559656856 0.8893176973555643 0.04497754236125884 0.05309693406839002 0.30928697295424695 0.004892266622844749 0.009878435863267643 7.652268759672904e-08 7.116209785273967 -0.3041835068643982 SSS(ph)VGSSS(ph)SYPISPAVSR ddPTM_A549_PD325901_60min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.018)S(0.058)S(0.923)VGS(0.017)S(0.255)S(0.473)S(0.255)Y(0.001)PISPAVSR;S(0.088)S(0.134)S(0.778)VGS(0.292)S(0.186)S(0.472)S(0.051)YPISPAVSR 231.15 2.1209999999999997e-64 238840000.0 11769.2 11855.9 12109.8 12777.4 13848.2 11357.5 11242.2 13084.4 12211.5 13321.8 15985.9 True False 12964.000519972882 12855.03830128467 12931.643850143078 13566.630978419138 12875.55020569647 11265.008285567119 11670.028072967885 12823.421377486768 11698.293121635146 12480.659274487387 14019.73564296937 0.9246965028526826 0.9169244434171073 0.9223885656237785 0.967680940918636 0.9183875169681472 0.8035107488789424 0.8324000088275688 0.9146692708087879 0.8344160988157874 0.8902207282878547 1.0 13.775171525604632 -4.184489148149448 17.418948422747754 0.9102562577877136 0.9040531847598496 0.0 0.056766391432425234 0.0 0.0 0.00938662106655359 0.0 6.538992689839003e-05 4.184489148149448 -0.006203073027863937 SSS(ph)VGSSSSYPIS(ph)PAVSR ddPTM_A549_MK2206_60min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.079)S(0.101)S(0.82)VGSSSS(0.001)YPIS(0.998)PAVS(0.001)R;S(0.053)S(0.072)S(0.86)VGS(0.015)SSSYPIS(0.998)PAVS(0.002)R 167.99 4.1343999999999996e-30 61894000.0 2719.6000000000004 3633.3999999999996 2376.8999999999996 3193.1 5032.6 3633.3 3816.0 4262.299999999999 6461.3 5600.200000000001 5938.799999999999 True False 3178.60199216376 3818.3245404938257 2713.980161177437 3975.409643343707 4292.3112066449075 4017.773394410652 4509.317804895925 4866.494077746297 4997.825866575884 4335.110930492182 4464.032057458289 0.7120473041525553 0.8553532975002618 0.6079661002082298 0.890542359950526 0.9615323437190647 0.9000323794041645 1.0101445838324514 1.090156615164892 1.119576607481068 0.9711200266246494 1.0 12.124131672261543 -6.936533081943995 0.912751896649899 1.058064916242429 0.7303513061229272 0.6981784467276654 0.08007762109997484 0.22749779496936795 0.3625215451761078 0.013447032335284593 0.041090440789534693 1.1573558683187837e-07 6.936533081943995 -0.32771361011950173 SSS(ph)VGSSSSYPIS(ph)PAVSR ddPTM_A549_PD325901_60min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 2 S(0.308)S(0.046)S(0.645)VGS(0.001)SSS(0.006)YPIS(0.994)PAVSR;S(0.002)S(0.005)S(0.988)VGS(0.004)SSSYPIS(1)PAVSR 242.79 1.3925999999999997e-74 75118000.0 14850.4 14355.8 14991.3 16714.9 16473.5 16375.4 15608.2 16710.8 16544.7 18204.8 18519.9 True False 16358.001675713325 15565.613647684482 16008.699768010205 17747.341410707824 15316.4581904898 16242.044171646565 16202.178592134764 16377.489984630998 15849.383794744062 17055.345821149396 16242.069707318857 1.0071377583327468 0.9583516096270935 0.985631761006204 1.092677333031681 0.9430114798477952 0.9999984278067542 0.997543963552495 1.0083376244377968 0.9758229142190021 1.0500721969850966 1.0 13.987447864672816 -8.750787046792292 24.813262430715604 0.9885830419130928 0.9985094785842289 0.0 0.040423188839354376 865.6433331159355 2016408.421465345 0.0058990642730966875 0.006652743222058637 1.775059655397187e-09 8.750787046792292 0.00992643667113613 SSS(ph)VGSSSSYPISPAVSR ddPTM_A549_MK2206_60min_R1 6 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.006)S(0.006)S(0.987)VGSSSSYPISPAVSR;S(0.007)S(0.007)S(0.984)VGS(0.002)SSSYPISPAVSR;SS(0.002)S(0.998)VGSSSSYPISPAVSR;SS(0.005)S(0.983)VGS(0.007)S(0.002)S(0.003)S(0.001)YPISPAVSR;S(0.001)S(0.031)S(0.968)VGSSSSYPISPAVSR;S(0.004)S(0.004)S(0.992)VGS(0.001)SSSYPISPAVSR 316.37 8.649599999999998e-173 2506936300.0 23728.670000000002 25348.0 22873.099999999995 23043.39 36920.1 32519.600000000002 27911.04 33955.9 49826.299999999996 49491.7 50432.50000000001 True False 27733.489385717174 26638.104929938218 26116.849520227035 28689.02158445709 31489.202197760744 35960.80248723658 32982.114681646344 38769.25281058248 38540.722606251074 38311.49059652154 37908.71838380902 0.731586045851718 0.7026907282973583 0.6889404504738323 0.7567921788859603 0.8306585804074537 0.9486156224842356 0.870040351871488 1.0227001719778794 1.0166717380430352 1.010624791074038 1.0 15.210242062315515 -7.188561709772687 0.8527245662934442 1.0086951783288571 0.6943992174521202 0.9261137558505288 0.034961594223407416 0.1008897687661839 0.14299900806925117 0.006007276670701419 0.015756885282449843 6.47796042091975e-08 7.188561709772687 -0.31429596087673695 SSS(ph)VGSSSSYPISPAVSR ddPTM_A549_PD325901_60min_R1 6 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.001)S(0.002)S(0.923)VGS(0.068)S(0.006)SSYPISPAVSR;S(0.001)S(0.006)S(0.992)VGS(0.002)SSSYPISPAVSR;SS(0.003)S(0.996)VGS(0.001)SSSYPISPAVSR;SSS(0.999)VGS(0.001)SSSYPISPAVSR;SS(0.003)S(0.919)VGS(0.078)SSSYPISPAVSR;SS(0.001)S(0.999)VGSSSSYPISPAVSR 352.25 3.4840999999999984e-220 5134022400.0 39638.1 40871.30000000001 41383.4 41949.0 46886.899999999994 43852.5 44392.6 44501.799999999996 47317.6 47315.200000000004 50677.899999999994 True False 43662.13073197307 44315.66788883982 44191.92638260017 44540.09445690867 43593.725895023854 43495.37977925004 46081.98468556282 43614.176688013285 45329.00582338642 44327.71019713748 44444.839573676654 0.9823892076287939 0.9970936629296927 0.9943095037916105 1.0021432158186578 0.9808501124806199 0.9786373445481182 1.0368354375353803 0.9813102512320611 1.0198935637565767 0.9973646124575384 1.0 15.43972829908462 -7.7149346109092525 24.999998085519326 1.0089508325901826 0.9900302628798558 0.2638775386214719 0.01465682501154672 119.38995313580031 64181.22405664668 0.002143972040610702 0.0031800224991307582 1.927815150796219e-08 7.7149346109092525 -0.01892056971032674 SSS(ph)VKSLSQEMRCTIR ddPTM_A549_PD325901_60min_R1 1 SSSVKSLSQEMRCTIR 16 2 A2A2Y4-2;A2A2Y4 A2A2Y4-2 FRMD3 FERM domain-containing protein 3 1 S(0.32)S(0.32)S(0.354)VKS(0.004)LS(0.001)QEMRCT(0.001)IR 59.872 0.002154 5797200.0 652.91 754.81 805.59 626.42 770.79 803.7 830.56 772.78 706.9 696.19 792.02 True False 719.1929425530619 818.4204877059258 860.2621818062039 665.1125406969586 716.6523694811438 797.1549336658859 862.1674152998711 757.3662966658181 677.1914513109685 652.2324445874714 694.6065610284435 1.0353961262447846 1.1782504422275566 1.2384884193038554 0.9575385232644281 1.0317385548735085 1.1476351914753122 1.2412313152114989 1.090352926618562 0.9749280949899323 0.9389955136930574 1.0 9.440052227788847 -8.68187800110774 5.019528507733883 0.9881881523011151 1.120016851295408 0.36658111003897387 0.08378173850027032 0.17624063641753415 7.913799305131231 0.014359981803326373 0.01620368239420418 2.080280982651237e-09 8.68187800110774 0.13182869899429295 SSS(ph)VLSLEGSEK ddPTM_A549_PD325901_60min_R1 1 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SS(0.001)S(0.836)VLS(0.163)LEGSEK 213.06 1.4077999999999998e-31 31917000.0 8805.6 8821.9 8178.3 9522.8 10196.0 9362.6 8930.5 9201.0 9178.6 9861.4 8948.1 True False 9699.5380296599 9565.352473460747 8733.328618113033 10111.001728152036 9479.868134290458 9286.354089760138 9270.35506445711 9017.478836955133 8792.855361441303 9238.749521042942 7847.540426679405 1.2359972045106298 1.218898145582184 1.1128746260958657 1.2884293904084274 1.2080050077934743 1.1833458108975363 1.1813070797240546 1.1490834512044399 1.120460027392544 1.177279633964525 1.0 12.938024840545893 -9.542150381476606 0.3986936648541978 0.9854209129371752 1.2199970591594904 0.20231612737992266 0.06464490944952585 0.3712993486089496 0.13525959446963995 0.03429884601846607 0.015824363622800534 2.8697866999794755e-10 9.542150381476606 0.23457614622231526 SSS(ph)VNPVLEETHEGEAPGCEEQKPTSEILSTSGK ddPTM_A549_PD325901_60min_R1 1 SSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK 34 1 A0A2R8YFC5;A0A2R8YHG5;Q9BZV2 A0A2R8YFC5 SLC19A3 Thiamine transporter 2 1 S(0.118)S(0.118)S(0.765)VNPVLEETHEGEAPGCEEQKPTSEILSTSGK 235.48 2.7813e-131 48117000.0 1775.2 1776.5 1734.9 1674.6 2155.1 2003.4 1743.9 2171.2 1998.6 2226.7 2172.7 True False 1955.4169971668314 1926.2118896272927 1852.6407468012046 1778.0362387074604 2003.733210691386 1987.0849746251524 1810.2650687986968 2127.8937127265494 1914.6057923187172 2086.1057819890016 1905.471673880078 1.026211527555826 1.0108845573678782 0.9722740947540329 0.9331213174567308 1.051568091070711 1.0428310228190834 0.9500351506734741 1.116728074153712 1.0047936259372672 1.0947975824490224 1.0 10.895932446338021 -6.783343707937652 24.999980738986118 1.0130647320944803 0.9864737333815885 0.0841910371435236 0.05154857721770866 511.4650142557909 583747.2065239762 0.006405330193853239 0.012111645977431001 1.6468585241825676e-07 6.783343707937652 -0.026590998712891833 SSS(ph)VPR ddPTM_A549_PD325901_60min_R1 1 SSSVPR 6 0 Q7Z591-4;Q7Z591-5;Q7Z591-8;Q7Z591-7;Q7Z591-2;Q7Z591 Q7Z591-4 AKNA AT-hook-containing transcription factor 1 S(0.141)S(0.068)S(0.791)VPR 66.682 0.055698000000000004 6256000.0 1053.3 881.82 905.69 828.06 1060.7 979.99 702.95 806.71 785.98 1053.3 1188.3 True False 1160.230240601523 956.1340661475588 967.1555697564031 879.2073855392925 986.2000912163485 972.0092863546486 729.7011469189994 790.6195361982478 752.9479939190761 986.7944582426978 1042.1466332543366 1.1133080543363114 0.917465964613651 0.9280417351023271 0.8436503630911998 0.9463160554832073 0.9326991570460018 0.7001904757302184 0.758645195378467 0.7224971706407831 0.9468863850389372 1.0 10.025342568214688 -2.0000000000043534 0.733713751349482 0.853074401732759 41.09185330740735 0.3797685086784963 0.09374217533016455 326.7509463888926 1.4092705856780783 0.018843458986051668 21709.488215794983 0.00999999999989976 2.0000000000043534 40.238778905674586 SSS(ph)YER ddPTM_A549_PD325901_60min_R1 1 SSSYER 6 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 SS(0.001)S(0.999)YER 96.19 0.035111 67581000.0 3456.2 3394.8 3434.1 3012.5 3513.9 3060.8 2711.9 3124.7 3510.5 3748.3 3822.1 True False 3807.0708796800336 3680.8917100516355 3667.158676920872 3198.575283116101 3267.095786296907 3035.8738596050057 2815.102838508622 3062.375407220272 3362.9658930925943 3511.631698311121 3352.005930288144 1.135758992930174 1.098116109160708 1.0940191494845108 0.9542272148788072 0.9746688562737901 0.9056886899194826 0.8398263299810543 0.9135948655547351 1.003269672856309 1.0476209682628024 1.0 11.710808986082922 -6.2027533564000965 4.932505788604709 0.9724147267057917 1.1112012777396718 0.5928265465798137 0.05570418407547602 0.14070717606174069 7.2053008230012106 0.008707603427533073 0.023570026528361102 6.269698309579365e-07 6.2027533564000965 0.13878655103388016 SSSAS(ph)SPEMK ddPTM_A549_MK2206_60min_R1 2 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSS(0.001)AS(0.672)S(0.327)PEMK;SSS(0.004)AS(0.498)S(0.498)PEMK 184.44 9.969399999999999e-41 37198000.0 956.85 1520.7 1177.4 1560.7 2296.9 1560.5 1772.2 1869.8 1954.1 2311.4 2487.3 True False 1118.3428872635293 1598.097134565136 1344.373024431114 1943.0715700624844 1959.0290526850324 1725.6310742239357 2094.1858002716363 2134.849876022344 1511.49947005648 1789.2531346629823 1869.634764012258 0.5981611536060404 0.8547643450614926 0.7190564971877574 1.0392786909313936 1.0478137711137405 0.9229776357606398 1.120104226013368 1.1418539690826732 0.8084463870434162 0.9570067743195062 1.0 10.868540749634553 -6.250688906107011 24.235097615356793 0.9571583830159831 0.7370710020195302 0.533212626075391 0.11046067468475743 396.0311657688153 892780.392358173 0.017751823761203798 0.0464241621700986 5.614500099840419e-07 6.250688906107011 -0.22008738099645286 SSSASS(ph)PEMK ddPTM_A549_MK2206_60min_R1 2 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSS(0.002)AS(0.106)S(0.891)PEMK;SSS(0.025)AS(0.279)S(0.696)PEMK 159.94 1.0153000000000002e-08 51604000.0 6234.5 6734.3 6395.799999999999 5907.64 9572.4 9115.699999999999 7841.0 8568.1 12105.9 11330.8 12306.8 True False 7286.731181109339 7077.0471054790505 7302.820612923827 7355.012065204042 8164.312640481607 10080.317323488058 9265.608204452037 9782.65441370577 9363.932979149862 8771.164410417632 9250.681909599187 0.7876966533189398 0.7650297756033949 0.7894359231340431 0.7950778263786091 0.8825633310350577 1.0896837035362745 1.0016135345479085 1.0575063016224318 1.0122424563569912 0.9481640916996646 1.0 13.175344001786872 -7.000941865680505 3.3491331575042205 1.0149979294152052 0.7841963112221206 0.9066688886280088 0.03515134816536676 0.04215339217562575 0.9934506445081591 0.004280570770457402 0.008153221963810643 9.978336241112951e-08 7.000941865680505 -0.23080161819308453 SSSASS(ph)PEMK ddPTM_A549_PD325901_60min_R1 4 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSSAS(0.077)S(0.923)PEMK;SSSAS(0.05)S(0.95)PEMK;SSS(0.003)AS(0.312)S(0.685)PEMK;SSSAS(0.207)S(0.793)PEMK 158.08 3.0291000000000003e-23 187030000.0 10463.3 10544.0 10601.8 10476.0 13977.400000000001 9260.6 11128.0 10998.2 9956.2 8756.8 10754.5 True False 11525.526513325647 11432.579884171215 11321.301901802415 11123.078727277774 12995.675643412265 9185.18474394214 11551.482129475253 10778.832273079008 9537.775537618134 8203.894153555164 9431.764678392461 1.221990465870067 1.2121358275999492 1.2003376131445218 1.1793210609632787 1.3778625831478264 0.9738564369597538 1.2247424022292372 1.1428224346789089 1.0112397693157609 0.8698153986336973 1.0 13.203312008328428 -8.414647003855391 0.8305788186813334 0.9975127419957043 1.2168527556238746 0.5301130767137409 0.09610612856426827 0.30087807317121207 0.4139891236498943 0.01844600010197446 0.022883401477797934 3.8490450672824985e-09 8.414647003855391 0.21934001362817035 SSSASS(ph)PPKK ddPTM_A549_MK2206_60min_R1 1 SSSASSPPKK 10 1 P51608;P51608-2 P51608 MECP2 Methyl-CpG-binding protein 2 1 S(0.031)S(0.031)S(0.028)AS(0.144)S(0.765)PPKK 43.68 0.027093 8960400.0 2837.1 2209.0 1871.3 1166.0 1956.6 1834.1 1321.8 2047.2 2410.0 3438.2 3585.2 True False 3315.9331195645714 2321.428664598136 2136.6784785272157 1451.6700523437296 1668.786731892347 2028.1832446229532 1561.953950343668 2337.396869287057 1864.1388479791822 2661.508232066396 2694.89589351375 1.230449431291789 0.8614168251120576 0.792861232105445 0.5386738893467845 0.6192397769089675 0.7526017051361859 0.579597139207893 0.8673421763389285 0.691729447681416 0.9876107787585734 1.0 11.396013825984035 -10.846288593053966 0.9994713215241984 1.0055303495682952 0.7547689350882898 0.18342955357885327 0.17887317217530674 0.7588855530575958 1.2956938899882313 0.13968969105559312 0.031211749775666712 1.4246605776945671e-11 10.846288593053966 -0.25076141448000544 SSSASS(ph)PPKK ddPTM_A549_PD325901_60min_R1 2 SSSASSPPKK 10 1 P51608;P51608-2 P51608 MECP2 Methyl-CpG-binding protein 2 1 S(0.004)S(0.004)S(0.005)AS(0.019)S(0.969)PPKK;S(0.002)S(0.002)S(0.002)AS(0.027)S(0.968)PPKK 59.198 0.0040467 24118000.0 18793.1 17704.0 14686.099999999999 15240.9 16461.1 11701.5 10839.1 11571.7 13991.3 19906.7 26405.1 True False 20700.961677250987 19195.978212193393 15682.787060693516 16182.29577840472 15304.929123712123 11606.206863619958 11251.5878818831 11340.893365676962 13403.294317056372 18649.78756470132 23157.44009572001 0.893922713032386 0.8289335147947212 0.6772245548674455 0.6987946729654093 0.6609076417967633 0.5011869539830974 0.4858735609538567 0.4897300098283749 0.5787899811747149 0.8053475465169486 1.0 14.499188161143877 -10.7210864018707 1.016321329891896 0.9964973863675396 0.6398977694249938 0.31175765752718976 0.1372525142995078 0.36843281059794564 0.6863857701580867 0.09195579353283179 0.02479165103843415 1.900700102469027e-11 10.7210864018707 -0.3565996169425458 SSSDS(ph)DDEEKKHEK ddPTM_A549_PD325901_60min_R1 4 SSSDSDDEEKKHEK 14 2 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 1 S(0.029)S(0.029)S(0.029)DS(0.914)DDEEKKHEK;S(0.003)S(0.003)S(0.025)DS(0.969)DDEEKKHEK;S(0.017)S(0.017)S(0.017)DS(0.948)DDEEKKHEK;SSSDS(1)DDEEKKHEK 127.61 3.1748000000000002e-09 40958600.0 5333.02 5495.7 5056.8 4704.73 5817.5 5203.16 5277.5 4706.2 5084.0 4553.05 5450.94 True False 5874.424264438176 5958.841926160831 5399.984857008665 4995.330486882924 5408.898869285481 5160.787190062198 5478.33815045881 4612.331149057519 4870.337160086238 4265.569645971624 4780.508936355627 1.2288282152896641 1.2464869338166102 1.129583675901522 1.0449369624421336 1.1314483334924796 1.0795476504216037 1.1459738332034508 0.9648201081648188 1.0187905147603575 0.8922835837691034 1.0 12.22294850137672 -2.0000000000000004 0.2275821123471733 0.9908812729739264 2.4906124241638086 0.6955467189700009 0.05743961787703278 16.402978216344437 0.19303357010130523 0.02694638769490717 9.2688251668562 0.00999999999999999 2.0000000000000004 1.499731151189882 SSSEATLS(ph)ISPPRPTTLSLDLTK ddPTM_A549_PD325901_60min_R1 1 SSSEATLSISPPRPTTLSLDLTK 23 1 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 S(0.001)S(0.001)S(0.001)EAT(0.006)LS(0.516)IS(0.474)PPRPTTLSLDLTK 73.322 3.5933e-05 3525500.0 1484.9 1308.0 1209.5 1095.3 1587.4 1563.3 1504.0 1418.2 1334.4 1391.0 1421.4 True False 1635.6459548743956 1418.2297504263997 1291.5839433143449 1162.9541933932164 1475.9065002327072 1550.5690031104625 1561.2355430203793 1389.9128884436223 1278.3198085009985 1303.1720226104549 1246.5768109969824 1.3121100444394156 1.137699448533888 1.036104580095122 0.9329181989701167 1.1839675559601597 1.2438615811169746 1.2524182459095643 1.1149837508464504 1.025464132834806 1.0454005008870724 1.0 10.2837560655503 -8.722559330843694 3.6812609461501324 1.011131018857423 1.1494087325598317 0.2514154260369955 0.09935042737601144 0.23217116207627642 6.507146583397714 0.01837333402285642 0.02034392930442377 1.894264713000456e-09 8.722559330843694 0.1382777137024087 SSSEATLSIS(ph)PPRPTTLSLDLTK ddPTM_A549_MK2206_60min_R1 1 SSSEATLSISPPRPTTLSLDLTK 23 1 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 S(0.037)S(0.037)S(0.037)EAT(0.238)LS(0.238)IS(0.353)PPRPT(0.02)T(0.02)LS(0.02)LDLTK 40.104 0.026976999999999998 1004200.0 419.46 373.07 583.5 516.67 604.69 578.15 533.21 469.8 815.14 657.47 760.73 True False 490.25459318760494 392.05766948919273 666.2490740237434 643.2541731941975 515.7409020279994 639.3294492550898 630.0873550179662 536.3955887021593 630.5120915110992 508.94707036725384 571.8197459200925 0.8573586286334965 0.6856315688405413 1.165138277888093 1.1249247298362577 0.9019291581093288 1.1180611614353577 1.1018985607153484 0.9380501329821453 1.1026413411040348 0.8900480859546521 1.0 9.159416629346973 -5.757964240426911 24.999999766140846 1.051373567827807 0.77149505397255 0.5183747904067184 0.09842707328762265 39.684735617934074 285476.31322198664 0.011231772577210721 0.040259280181121966 1.7459659088920177e-06 5.757964240426911 -0.2798785138552571 SSSEATLSIS(ph)PPRPTTLSLDLTK ddPTM_A549_PD325901_60min_R1 1 SSSEATLSISPPRPTTLSLDLTK 23 1 Q9NZJ5 Q9NZJ5 EIF2AK3 Eukaryotic translation initiation factor 2-alpha kinase 3 1 SSSEATLS(0.167)IS(0.829)PPRPT(0.001)T(0.001)LS(0.001)LDLTK 107.87 6.208e-11 4782100.0 1763.1 1683.3 1302.0 1764.7 1643.2 1661.4 1583.7 1679.1 1448.2 1636.9 1854.6 True False 1942.088614074379 1825.1575985418644 1390.3615495620313 1873.7015110755135 1527.787300732257 1647.8701092354145 1643.9685701338924 1645.6090332715328 1387.3371902511599 1533.5458546448992 1626.4959572780385 1.1940322417551463 1.122140876142286 0.8548201692974503 1.15198657745893 0.9393120799937483 1.0131412266115594 1.01074248772502 1.0117510750075764 0.8529607368793503 0.9428525461639066 1.0 10.667551521168292 -2.000000000000143 0.44337959590752224 0.9439304430648948 6.32008618445142 0.35933673168132474 0.08530424206078827 55.06811971567139 0.5946176765828258 0.018202561393668985 269.51108286459925 0.009999999999996708 2.000000000000143 5.376155741386525 SSSERST(ph)PPYLFPEYPEASK ddPTM_A549_MK2206_60min_R1 1 SSSERSTPPYLFPEYPEASK 20 1 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 S(0.097)S(0.097)S(0.097)ERS(0.087)T(0.618)PPY(0.004)LFPEYPEASK 72.532 0.00021909999999999999 9225100.0 1198.0 1834.7 1480.0 1131.7 2349.6 1796.6 1667.1 1714.5 2304.1 1976.2 1977.5 True False 1400.1931117120844 1928.0783933626972 1689.8862545932138 1408.966550803944 2003.9769524962999 1986.7150195134382 1969.9904907080713 1957.535625436039 1782.2250288916312 1529.7750474694926 1486.4321737764799 0.9419825111526658 1.2971183128148767 1.1368741099702058 0.9478848585632239 1.3481792091494684 1.3365662117403734 1.325314753987763 1.3169357202909957 1.198995191528753 1.0291589986126943 1.0 10.537637918920899 -10.365927850577394 0.9369390569426609 1.0105860310352608 1.210792581218094 0.21348955670934788 0.13980469380164737 0.5980950837539972 1.0102990172613457 0.07060933941509853 0.0262892334062616 4.30598139898574e-11 10.365927850577394 0.20020655018283318 SSSGESLAQS(ph)PDSSK ddPTM_A549_MK2206_60min_R1 2 SSSGESLAQSPDSSK 15 0 Q9H7U1-2;Q9H7U1;Q9H7U1-3 Q9H7U1-2 CCSER2 Serine-rich coiled-coil domain-containing protein 2 1 SSSGESLAQS(1)PDSSK;SSSGESLAQS(1)PDSSK 194.53 2.0621999999999996e-71 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SSSGLLEWESK ddPTM_A549_PD325901_60min_R1 1 SSSGLLEWESK 11 0 P14866;M0QXS5;A0A3B3ITJ4;P14866-2;M0R076;M0QYT0 P14866;M0QYT0 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 130.94 2.4648e-07 1069200.0 2235.3 2534.8 2119.0 2110.9 2707.2 2420.2 2101.4 2474.6 2665.9 2639.0 2855.9 False True 2462.2260104591137 2748.4164918813744 2262.80808258214 2241.2854987982673 2517.055611332989 2400.490693614753 2181.3699269302015 2425.242161713854 2553.861493916975 2472.3730896254438 2504.642405041708 0.983064890022938 1.0973288986679146 0.9034455689272173 0.8948524924303295 1.0049560792655645 0.9584165343454606 0.8709306855698136 0.9682987706476478 1.019651144121888 0.9871161985633925 1.0 11.290388925088752 -8.684710302391832 6.013271886384511 1.0092335565347579 0.958741992425524 0.09109374082917232 0.058390160617262606 0.32072791948993723 19.391375962864327 0.010025078699384495 0.011337004855232844 2.0667583342616595e-09 8.684710302391832 -0.05049156410923383 SSSISEEKGDS(ph)DDEKPR ddPTM_A549_MK2206_60min_R1 9 SSSISEEKGDSDDEKPR 17 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSIS(0.001)EEKGDS(0.998)DDEKPR;SSSIS(0.001)EEKGDS(0.998)DDEKPR;S(0.038)S(0.038)S(0.038)IS(0.034)EEKGDS(0.851)DDEKPR 165.66 2.1458000000000004e-23 4022605900.0 42634.77999999999 44600.46000000001 42753.4 40387.06 52602.2 43168.20999999999 39493.67999999999 42158.829999999994 61531.50000000001 62156.0 64733.299999999996 True False 49830.488543706306 46870.43291003282 48816.47499805775 50281.89151304404 44864.486061712974 47736.241329461314 46669.17044152573 48134.97325850202 47594.713495614546 48114.91643078323 48658.23506180786 1.0240915742301255 0.963257973711868 1.0032520689673368 1.0333685849717675 0.9220327454278623 0.9810516404638312 0.9591217269233968 0.9892461820154147 0.9781430303659312 0.9888339840042598 1.0 15.570396371141944 -3.436207794809709 7.807125793170313 0.986531955399255 0.987537288174061 0.0 0.02959048752551748 0.0 0.0 0.0036017123807395566 0.0 0.000366262288946346 3.436207794809709 0.001005332774805967 SSSISEEKGDS(ph)DDEKPR ddPTM_A549_PD325901_60min_R1 7 SSSISEEKGDSDDEKPR 17 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;S(0.045)S(0.045)S(0.045)IS(0.042)EEKGDS(0.824)DDEKPR 218.69 4.729300000000001e-56 4234124000.0 49816.90000000001 45053.0 50281.2 52169.57 56653.7 51228.700000000004 56514.4 51837.899999999994 54790.5 51255.6 57569.200000000004 True False 54874.27501473652 48849.774423517265 53693.58459741819 55391.96585321002 52674.53955665475 50811.510452021364 58665.086417866325 50803.95241845415 52487.84582409618 48019.312668664556 50488.55336122661 1.086865662839094 0.9675415747014081 1.0634803539182591 1.0971192907212322 1.0432966692427932 1.0063966398182203 1.1619482538574575 1.0062469418557307 1.0395989254943667 0.9510930591554968 1.0 15.623668720268155 -9.875292499814492 0.7066023759903902 1.0029173223524068 1.0536506896261253 0.21728872894046702 0.051924772783653705 0.9447784630843924 0.9734718343151122 0.022524479421149702 0.010389812537133596 1.332623600242353e-10 9.875292499814492 0.050733367273718466 SSSISEEKGDS(ph)DDEKPRK ddPTM_A549_MK2206_60min_R1 2 SSSISEEKGDSDDEKPRK 18 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.002)S(0.002)S(0.002)IS(0.038)EEKGDS(0.956)DDEKPRK;S(0.001)S(0.001)S(0.001)IS(0.008)EEKGDS(0.99)DDEKPRK 47.808 0.0037665 18106700.0 2582.6000000000004 3034.2 2782.9 2303.7 2552.2 1958.76 2157.5 1347.95 3071.2 3572.8 3159.5 True False 3018.479741492179 3188.6278198839573 3177.557066153683 2868.106603417024 2176.7747608788964 2166.0346830803423 2549.4898228676525 1539.0260404237447 2375.5781036986155 2765.701998582635 2374.908952236051 1.2709875629759138 1.3426316056797734 1.3379700569834114 1.2076701301397732 0.9165718790311498 0.9120495676438262 1.073510553096037 0.6480358074252504 1.0002817587857145 1.1645507487681328 1.0 11.213656490031825 -6.616096469304019 3.8764024683238683 0.9672654467547689 1.3148643831767555 0.6343773792720597 0.12226628120366947 0.09743501877032473 2.7927133568010953 0.015382544553525864 0.03352396314763583 2.420491326228185e-07 6.616096469304019 0.3475989364219866 SSSISEEKGDS(ph)DDEKPRK ddPTM_A549_PD325901_60min_R1 2 SSSISEEKGDSDDEKPRK 18 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SSSISEEKGDS(1)DDEKPRK;SSSIS(0.001)EEKGDS(0.999)DDEKPRK 85.24799999999999 1.2790999999999998e-05 32984000.0 3658.0 4049.2999999999997 3997.6000000000004 4726.4 4951.5 4438.4 4283.6 4538.7 4478.8 4312.7 4599.5 True False 4029.3574671227257 4390.548722019586 4268.901175521643 5018.338993566788 4603.723721747669 4402.255141946832 4446.6147420758625 4448.1720679587315 4290.571611446546 4040.3953859900125 4033.7906586327736 0.9989009862223365 1.0884423842430468 1.0582852549340176 1.2440752181392876 1.1412896977921185 1.0913444733492805 1.102341474404379 1.1027275444845246 1.063657481149705 1.0016373500551161 1.0 11.977920499106501 -9.490985893027416 0.7200979009816867 1.008044968730156 1.1089520574155967 0.3171838507405501 0.05666899150944246 0.5161057011451573 0.5811966434380951 0.021515460185165963 0.013531470782193243 3.2285989929916066e-10 9.490985893027416 0.10090708868544063 SSSKES(ph)LVR ddPTM_A549_MK2206_60min_R1 1 SSSKESLVR 9 1 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 S(0.025)S(0.002)S(0.053)KES(0.919)LVR 95.618 0.00025503 199350000.0 12945.0 13419.0 12023.0 11256.0 16519.0 13527.0 13689.0 12981.0 19246.0 19144.0 19093.0 True False 15129.799525135999 14101.969782816834 13728.042188496082 14013.72050530105 14089.076982586987 14958.418161504105 16176.114106713934 14821.096502645221 14886.811729546613 14819.357103914574 14351.681160007258 1.0542179244684633 0.9826005487157646 0.9565459290407716 0.9764514936655659 0.981702200983112 1.0422763712998024 1.1271232914364546 1.0327080386892964 1.0372869605709025 1.0325868404330605 1.0 13.80893212405625 -7.255679095527679 24.22267641001283 1.0299441610718794 0.9872306790650187 0.29589691346069447 0.03832646563808314 407.873294017152 1715149.7837166938 0.006241200226729386 0.010629872238239408 5.550356828093596e-08 7.255679095527679 -0.04271348200686065 SSSLEMTPYNTPQLS(ph)PATTPANKK ddPTM_A549_MK2206_60min_R1 6 SSSLEMTPYNTPQLSPATTPANKK 24 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7;B4DGD8;A0A0A0MQV8;B0QZ65 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 SSSLEMTPYNTPQLS(0.956)PAT(0.037)T(0.007)PANKK;SSSLEMTPYNTPQLS(0.967)PAT(0.028)T(0.004)PANKK;SSSLEMTPYNT(0.001)PQLS(0.986)PAT(0.011)T(0.002)PANKK;SSSLEMTPYNTPQLS(0.995)PAT(0.004)T(0.001)PANKK;SSSLEMTPYNTPQLS(0.997)PAT(0.003)TPANKK;SSSLEMTPYNTPQLS(0.997)PAT(0.002)TPANKK 173.53 1.7360999999999997e-41 71801600.0 6995.4 6824.31 6473.03 5765.86 10140.6 7062.79 7547.780000000001 7551.27 11289.5 10794.0 10075.800000000001 True False 8176.052498890409 7171.638230015259 7391.002988222636 7178.495958839287 8648.93117317159 7810.169749899431 8919.11392595319 8621.685647294491 8732.446275626957 8355.627903241426 7573.700782066785 1.0795320193068478 0.9469133302699863 0.9758773419889065 0.9478187963058595 1.1419689557383577 1.0312223805292868 1.1776427644292617 1.1383715696438856 1.152995943053874 1.1032424099755973 1.0 12.886782709745578 -6.755324822308876 24.997805888569044 1.0878611678925556 0.9838010759049017 0.4509527240502653 0.060923944069622954 142.039685458928 580686.6818750183 0.01055996060912328 0.021551093039439726 1.7566092999504924e-07 6.755324822308876 -0.10406009198765387 SSSLEMTPYNTPQLS(ph)PATTPANKK ddPTM_A549_PD325901_60min_R1 6 SSSLEMTPYNTPQLSPATTPANKK 24 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;F8W9S7;Q14C86-4;H0Y4E7;B4DGD8;A0A0A0MQV8;B0QZ65 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 SSSLEMTPYNT(0.001)PQLS(0.993)PAT(0.005)T(0.001)PANKK;SSSLEMTPYNTPQLS(0.981)PAT(0.017)T(0.002)PANKK;SSSLEMTPYNT(0.001)PQLS(0.971)PAT(0.024)T(0.004)PANKK;SSSLEMTPY(0.001)NT(0.021)PQLS(0.833)PAT(0.127)T(0.018)PANKK;SSSLEMTPYNTPQLS(0.999)PAT(0.001)TPANKK;SSSLEMTPYNTPQLS(0.98)PAT(0.018)T(0.002)PANKK 182.44 9.7606e-51 101732400.0 11054.44 11150.4 10834.2 12159.1 14106.2 13510.699999999999 12102.600000000002 11997.5 13434.699999999999 13411.0 12214.3 True False 12176.67861095138 12090.083340332209 11569.47396333715 12910.139991680333 13115.429175748144 13400.6733386583 12563.171065796842 11758.200450643319 12870.086279427735 12564.227171264425 10712.018532827096 1.13673053996647 1.1286466041187306 1.0800461115598683 1.2052014241869606 1.2243658032849523 1.2509942264935214 1.1728108037991969 1.0976643117830862 1.2014622864950444 1.1729093945049867 1.0 13.386942741328289 -10.829194088047208 0.8612708339985902 0.9898857567858027 1.1689018982313513 0.0 0.07128170096429715 0.4111353720560619 0.48897932788021303 0.050257186929906675 0.009885842029180691 1.481855689546282e-11 10.829194088047208 0.17901614144554856 SSSLGNS(ph)PER ddPTM_A549_MK2206_60min_R1 2 SSSLGNSPER 10 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 SSSLGNS(1)PER;SSSLGNS(1)PER 90.434 0.00066201 13817900.0 2351.1 2464.6 2458.02 1742.6599999999999 3208.8 2918.5 3052.2 2302.5 3609.6 2965.5 3299.1000000000004 True False 2747.9082011237756 2590.037612842266 2806.604196969736 2169.61177823098 2736.7897706716553 3227.3337328564903 3606.745231683269 2628.8864261105177 2792.0313633467454 2295.5914903708017 2479.8424194720533 1.1080979095876553 1.04443636922449 1.1317671538045748 0.8748990505182502 1.1036143866166725 1.301426940484216 1.454425169665066 1.0601022087000977 1.1258906378176867 0.9257005494968193 1.0 11.276032732746339 -4.823679891928135 16.75126461299246 1.094800227488643 13.058606188550153 0.0 0.15495287753126613 3735.5071591707033 355088.5178688077 0.020794570146371247 951.1503868185002 1.5007906247891477e-05 4.823679891928135 11.96380596106151 SSSLGNS(ph)PER ddPTM_A549_PD325901_60min_R1 2 SSSLGNSPER 10 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 SSSLGNS(1)PER;SSSLGNS(1)PER 98.156 0.00050038 7094600.0 2020.5 1966.6 1730.7 1789.6 2289.7 1515.5 1458.5 1726.1 1756.0 1718.5 1840.2 True False 2225.6196725865166 2132.3322837832998 1848.1557095445546 1900.1395275235102 2128.879371036179 1503.1582704624227 1514.004015621823 1691.6715814007453 1682.2014266544918 1609.993616718956 1613.8670659889178 1.3790600970116083 1.3212564583048143 1.1451722068645558 1.177382925500853 1.3191169309423143 0.9314015399039964 0.9381218859522966 1.048209990185376 1.0423420008411295 0.9975998957091374 1.0 10.656306033577088 -6.146986724307166 0.5774185188069368 1.0106676229114149 1.4315530893047634 0.677847576072951 0.08732291514634528 0.7688984789739824 0.3031725114279182 0.01671397640403212 0.17804310265404372 7.128748212449961e-07 6.146986724307166 0.42088546639334856 SSSLGNS(ph)PERGPLRPFVPEQELLR ddPTM_A549_PD325901_60min_R1 1 SSSLGNSPERGPLRPFVPEQELLR 24 2 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 S(0.001)S(0.004)S(0.004)LGNS(0.992)PERGPLRPFVPEQELLR 114.03 2.3176999999999997e-16 5272900.0 970.13 1599.1 1334.9 1387.4 1076.1 1253.2 1253.6 1230.5 1616.2 1364.2 1816.9 True False 1068.616883428041 1733.8617690419385 1425.4943414058032 1473.0965469859846 1000.5184483434653 1242.9943546971363 1301.306433996242 1205.9567121914247 1548.2767344868969 1278.0641791841717 1593.4328182780478 0.6706381788865425 1.0881298220753644 0.8946058629232149 0.9244798588859835 0.6279012436964121 0.7800732735255103 0.8166685278909381 0.7568293425101215 0.9716611310667311 0.8020822494200408 1.0 10.637922478688251 -8.84406668674425 7.1279158131966085 0.9873374333548172 0.8271664515699396 0.05889338938949862 0.1308072538604048 0.2163828677316767 15.741421651602755 0.0204847215695509 0.021766758537951732 1.4319680009791862e-09 8.84406668674425 -0.16017098178487754 SSSLIQLTSQNSS(ph)PNQQR ddPTM_A549_MK2206_60min_R1 2 SSSLIQLTSQNSSPNQQR 18 0 H7C419;O95639 H7C419 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 SSSLIQLTSQNS(0.044)S(0.956)PNQQR;SSSLIQLTS(0.008)QNS(0.155)S(0.837)PNQQR 160.43 9.031399999999999e-23 6284600.0 1315.8899999999999 1837.35 1569.51 1983.8 2671.6 1830.75 1625.06 1702.17 2658.6 2277.7 2488.3 True False 1537.9800615783086 1930.8632670436318 1792.0901185449948 2469.831089056165 2278.6111790471186 2024.4787498465025 1920.3123668826454 1943.457810176998 2056.4313449118063 1763.1659880686475 1870.3864364136632 0.8222793063701206 1.0323338693291257 0.9581389619041527 1.3204924078640645 1.218256898513549 1.0823852816898634 1.0266928424506283 1.0390675276192893 1.0994687006257762 0.9426747081471551 1.0 10.869120657609598 -10.91610712200662 1.0426782130389498 0.9977778961542352 1.0749879050446847 0.06749877191336495 0.12361526820524597 1.7097728074384988 3.1395210241830513 0.10158337057593024 0.021360316839997128 1.2130895958696448e-11 10.91610712200662 0.07721000889044949 SSSPAGET(ph)EGDREPQAR ddPTM_A549_PD325901_60min_R1 1 SSSPAGETEGDREPQAR 17 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.236)S(0.236)S(0.178)PAGET(0.35)EGDREPQAR 95.195 1.1873e-05 8929700.0 496.18 257.48 396.37 262.76 513.14 676.19 276.57 468.97 505.02 375.55 341.66 True False 546.5518283315895 279.1787432261387 423.27005176643814 278.9900884287424 477.09881663689777 670.6833328300803 287.09502269491117 459.6160254501522 483.79576565435747 351.8377089082361 299.6379859611856 1.8240405220264313 0.9317201299781225 1.4126047817624416 0.9310905208957122 1.5922507792409872 2.2383121107914503 0.9581396089483153 1.5339044012586902 1.6146009128396264 1.174209297194423 1.0 8.22707671972615 -10.923867409100248 1.1655422346358466 0.998679146357235 1.4478859547023466 0.11198862223071093 0.3839203153406617 0.7274321616370314 1.7473555769752545 0.2632887402930525 0.06139939426684095 1.1916057519144987e-11 10.923867409100248 0.4492068083451116 SSSPAPADIAQTVQEDLR ddPTM_A549_MK2206_60min_R1 1 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 60.628 0.009010299999999999 677370.0 1693.9 1016.1 606.05 411.09 1131.6 857.64 996.27 649.58 1133.4 1494.1 2219.9 False True 1979.7889081211172 1067.8151498859966 691.9970031055516 511.80706845453125 965.1431390214556 948.3948955446425 1177.2793630722397 741.6599542553179 876.6867096678855 1156.581772302484 1668.6375638768195 1.186470298272194 0.6399323454070484 0.41470779400279373 0.3067215311067475 0.57840190099706 0.5683648241390388 0.7055332976785051 0.44447036930667344 0.5253907311250026 0.6931294112877013 1.0 10.704454913071412 -10.71187342209461 0.901943273098435 1.0078011390239443 0.5799309721735897 0.09368440649450571 0.23273715967530673 0.5628166854006758 0.7908107035124041 0.16084884253362564 0.03900892398619353 1.9414516436437542e-11 10.71187342209461 -0.4278701668503546 SSSPAPADIAQTVQEDLR ddPTM_A549_PD325901_60min_R1 2 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 ; 346.63 2.566899999999999e-219 25421000.0 6290.799999999999 6593.9 6806.5 7278.299999999999 7791.9 6156.3 7254.1 6942.2 7761.2 7719.4 7520.0 False True 6929.437384957807 7149.591094294064 7268.430020809499 7727.864060781388 7244.623824595707 6106.165133914763 7530.15874509583 6803.732374949452 7435.023754300025 7231.995766598954 6595.087673207616 1.0506967804398535 1.0840782486242153 1.1020975582079553 1.1717606260452986 1.0984878721213696 0.9258656497806559 1.1417829630509566 1.0316363803000603 1.1273578339988761 1.096573104854809 1.0 12.687176123041274 -7.032304248549544 24.991484838108924 1.0557613807790474 1.1051453106935731 0.1256099273217307 0.06223924682927419 1139.4903991162703 881539.6238623238 0.009867126126391476 0.017100589650768307 9.28315819690267e-08 7.032304248549544 0.04938392991452578 SSSPCRT(ph)PEPDNDAHLR ddPTM_A549_MK2206_60min_R1 1 SSSPCRTPEPDNDAHLR 17 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 S(0.242)S(0.242)S(0.242)PCRT(0.273)PEPDNDAHLR 85.927 2.4631999999999997e-05 11589000.0 337.87 384.6 393.92 536.77 668.72 351.04 337.02 234.14 659.73 548.71 599.4 True False 394.8941958715874 404.1744972405805 449.7837793306475 668.2786740965207 570.3521738480273 388.1868197985069 398.2521715424595 267.3300620236772 510.3022083723258 424.75602990435465 450.5524374015789 0.8764666731113849 0.8970642786254386 0.9982939653475977 1.4832428339542678 1.2658952133015995 0.8615796688111459 0.8839196916551048 0.5933383993335387 1.1326144661769786 0.9427449385336876 1.0 8.815551213186957 -5.816129219256837 4.895054398794822 1.0463414129659783 0.8853248545063583 0.040775176020524606 0.21871647773699848 0.41215464443144173 20.259858814754732 0.03132723047778959 0.10676199727860454 1.5271116163875232e-06 5.816129219256837 -0.16101655845961993 SSSPIPLT(ph)PSKEGSAVFAGFEGR ddPTM_A549_PD325901_60min_R1 1 SSSPIPLTPSKEGSAVFAGFEGR 23 1 A0A3B3IRN2;A0A3F2YNX2;A0A3B3ITF3;A0A3B3ITL5;A0A3B3IT59;Q8N5Y2-4;Q8N5Y2-6;Q8N5Y2-2;Q8N5Y2-3;Q8N5Y2 A0A3B3IRN2 MSL3 Male-specific lethal 3 homolog 1 S(0.004)S(0.004)S(0.011)PIPLT(0.896)PS(0.078)KEGS(0.008)AVFAGFEGR 40.819 0.034589 5907200.0 1196.9 950.45 1461.4 948.94 1334.0 1079.1 1301.5 1088.0 1274.1 1207.6 1084.1 True False 1318.4084068887892 1030.5477571045656 1560.5793921120994 1007.5538686008945 1240.3044420501644 1070.3121673744647 1351.0292947081275 1066.2989864805113 1220.5540078021008 1131.3519299096952 950.7625726761146 1.3866852196104655 1.0839170437724315 1.6413975864863206 1.0597323638486622 1.3045364612524402 1.125740745517415 1.4209954551590949 1.121519732817412 1.2837632053253878 1.1899415925947474 1.0 9.89294130164011 -14.048116877518433 0.248807160602725 1.28871356939761e-12 1.2989292963563512 0.09279722353226705 0.17361751893401323 24.888214545577227 0.486096467954948 12.279226076237546 0.07883422387174983 8.951238370182536e-15 14.048116877518433 1.2989292963550625 SSSPNS(ph)PLPMFR ddPTM_A549_MK2206_60min_R1 1 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 SSS(0.012)PNS(0.988)PLPMFR 100.55 0.00024116 2748100.0 1540.1 1396.9 1658.1 1622.4 2207.5 1898.6 1517.6 1536.4 2540.4 2334.5 2390.0 True False 1800.0312281701003 1467.9962433576898 1893.2435126628432 2019.8880728323031 1882.7796742575683 2099.508591811319 1793.3282758674154 1754.1894050276646 1965.0034561851915 1807.1348286193347 1796.497039355646 1.0019672667068364 0.8171437031058062 1.0538528431652174 1.124348122252838 1.0480282644567394 1.168667994334327 0.9982361432171538 0.9764499281651163 1.093797213765509 1.0059214065098065 1.0 10.810970842428857 -5.787621107160571 24.89794911182213 1.0518805269760534 0.909555509390881 0.39424672833613195 0.06816944992139908 130.5995847922917 124195.901729749 0.009152705912885155 0.028469721390841436 1.6307181045127585e-06 5.787621107160571 -0.14232501758517235 SSSPNS(ph)PLPMFR ddPTM_A549_PD325901_60min_R1 1 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.06)S(0.06)S(0.171)PNS(0.709)PLPMFR 51.463 0.026900999999999998 5306200.0 1498.7 1630.9 1883.1 1687.9 1979.8 1834.9 1876.3 1903.0 2265.7 2128.0 2290.7 True False 1650.846920715373 1768.3416666440485 2010.8984900002024 1792.157749500968 1840.7456779392169 1819.957182759157 1947.7036232507558 1865.0431721253801 2170.480508183987 1993.6377168332472 2008.9584219437077 0.8217427014333852 0.8802281059321986 1.0009657084165124 0.8920830465804361 0.9162686782528124 0.9059207810773464 0.9695091754892137 0.92836325120204 1.0804009104797716 0.9923738067731449 1.0 10.972231990556912 -8.693090761461974 7.010193106280116 1.037880731117945 0.916458734878486 0.49466096569809415 0.04894578058148108 0.12252828732136216 10.330793120949844 0.00867570984206268 0.009819027779669073 2.0272590065186175e-09 8.693090761461974 -0.12142199623945904 SSSPVQVEEEPVRLAS(ph)LRK ddPTM_A549_PD325901_60min_R1 1 SSSPVQVEEEPVRLASLRK 19 2 A0A0J9YVR0;Q8IZ21-3;Q8IZ21;Q8IZ21-2 A0A0J9YVR0;Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 SSSPVQVEEEPVRLAS(1)LRK 109.08 1.8213e-10 3319300.0 927.0 842.23 804.25 1169.0 901.66 1280.2 795.44 1109.4 895.24 1029.7 955.18 True False 1021.1083575786683 913.2076779064425 858.8312413481297 1241.206475008372 838.3305121581349 1269.774475648958 825.7109044814694 1087.2721466925368 857.6161760809609 964.6845662702982 837.6989153849004 1.2189443472175157 1.090138307612405 1.0252266364144922 1.4816856655927155 1.0007539663256508 1.5157886113121328 0.9856893560642574 1.2979271271862207 1.0237761567196362 1.1515886538148987 1.0 9.710287995354875 -8.839493037055055 8.328185970170015 1.0107255326632354 1.1981236551161962 0.10139821960276274 0.17514067338696993 0.28015239198299663 26.675715640998643 0.026443346632669357 0.028115140077042074 1.4471280543848726e-09 8.839493037055055 0.18739812245296084 SSSQLGS(ph)PDVSHLIR ddPTM_A549_PD325901_60min_R1 2 SSSQLGSPDVSHLIR 15 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SSSQLGS(1)PDVSHLIR;SSSQLGS(0.998)PDVS(0.001)HLIR 76.155 0.00019439999999999998 6652800.0 865.4100000000001 913.37 782.8499999999999 774.72 739.6800000000001 779.54 807.0799999999999 933.4599999999999 825.6500000000001 984.35 952.25 True False 953.2657861188299 990.3428953722937 835.9789086594749 822.5726948832221 687.7274285574706 773.1916846956632 837.7938710511224 914.8414080147961 790.9508017752171 922.1979730097781 835.1292868100999 1.1414589347716086 1.1858557842643205 1.0010173536754055 0.9849644933722304 0.8234981570151222 0.9258347143458272 1.0031906248327134 1.0954488394355903 0.9470998254610025 1.1042577329939536 1.0 9.705855749039614 -5.824321375212724 4.868780721380939 0.9721329539128463 1.1642302742851125 0.44821675747691725 0.07432000744915306 0.10104822572623116 4.655488254539495 0.009015217616228878 0.03055403061112321 1.4985754885665595e-06 5.824321375212724 0.19209732037226623 SSSQPS(ph)SCCSDPSKPGGNVEGATQSLAEQMR ddPTM_A549_PD325901_60min_R1 1 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 E7EMC7;Q13501-2;Q13501 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.053)S(0.053)S(0.048)QPS(0.278)S(0.278)CCS(0.278)DPS(0.012)KPGGNVEGATQSLAEQMR 78.22 3.2798000000000003e-06 3805500.0 808.0 772.37 893.19 638.24 1002.5 756.71 522.13 1023.5 892.73 765.23 1129.3 True False 890.0275651818388 837.4603305327506 953.8072445877972 677.6626352517908 932.0878584372492 750.547604646401 541.9999428704988 1003.0854895797828 855.2116626522009 716.9132472050316 990.4032592225211 0.8986516925242365 0.8455750955324677 0.9630493798420532 0.6842290036320805 0.9411195386906842 0.7578202087456681 0.547251776307739 1.012805117752962 0.8634984332781303 0.7238599434414396 1.0 9.951872251960618 -9.984901085355148 0.6712094794702252 0.9936717561808194 0.8259184880511989 0.0 0.14865064833153455 0.837189221399561 0.7565509789465886 0.06760298069530143 0.02726869167011073 1.0353779568750863e-10 9.984901085355148 -0.16775326812962044 SSSQSGSGPSS(ph)PDSVLRPR ddPTM_A549_MK2206_60min_R1 2 SSSQSGSGPSSPDSVLRPR 19 1 O75427;H7C5D9 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 SSSQS(0.002)GS(0.005)GPS(0.133)S(0.854)PDS(0.005)VLRPR;SSS(0.001)QS(0.003)GS(0.005)GPS(0.115)S(0.859)PDS(0.017)VLRPR 60.133 0.00082574 10845200.0 2936.7 3382.1000000000004 2641.2 3115.7 3687.5 2784.6000000000004 2945.3 2837.7 4315.3 3953.4 3800.6000000000004 True False 3432.34316457836 3554.2344438829114 3015.761875426752 3879.046639869088 3145.073634801711 3079.2645237321176 3480.422885419283 3239.952665091775 3337.8914401180764 3060.3241942444542 2856.806128776179 1.2014617057856614 1.2441286820556852 1.0556410689018887 1.3578263504814114 1.1009055193216848 1.0778696155525391 1.218291591564967 1.1341170940709693 1.168399705704912 1.071239718865858 1.0 11.48018741875104 -14.999999997567626 0.20237966942422855 0.15783256547753738 1.2027471594644168 0.28353984028470747 0.08275216528707238 32.70864977118917 0.38715058866024593 10.881725494017623 0.06250935332942001 1.0000000056007488e-15 14.999999997567626 1.0449145939868794 SSSQSGSGPSS(ph)PDSVLRPR ddPTM_A549_PD325901_60min_R1 1 SSSQSGSGPSSPDSVLRPR 19 1 O75427;H7C5D9 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 S(0.001)S(0.001)S(0.002)QS(0.008)GS(0.019)GPS(0.442)S(0.507)PDS(0.02)VLRPR 44.541000000000004 0.01284 10394000.0 3010.1 3077.6 2845.9 3332.1 2914.3 2520.4 2828.6 2657.3 3830.8 2849.4 3042.2 True False 3315.683136081498 3336.960152838137 3039.0398877869334 3537.9162492518362 2709.6096217892004 2499.874698035957 2936.2439208693127 2604.2980668884775 3669.8047979658472 2669.488397718353 2668.0286860947094 1.242746434235227 1.250721242327633 1.139058175658256 1.326041308210375 1.0155848907889198 0.9369744452392356 1.1005293669339065 0.9761132181455228 1.3754742657349288 1.0005471124172134 1.0 11.3815584628278 -6.753217572020384 24.99876235253596 1.1319184516647205 1.233248606093027 0.19452414000939777 0.13095989080073658 409.4235555739662 1244860.6927809038 0.023796421945872878 0.04886834930134457 1.7651532960127364e-07 6.753217572020384 0.10133015442830651 SSSS(ph)FTPFIDPR ddPTM_A549_MK2206_60min_R1 2 SSSSFTPFIDPR 12 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 S(0.007)S(0.007)S(0.078)S(0.906)FT(0.002)PFIDPR;S(0.007)S(0.007)S(0.077)S(0.899)FT(0.01)PFIDPR 134.75 4.1628999999999995e-08 10826600.0 2227.8 2508.3999999999996 2145.29 2446.2 2942.0 2492.3999999999996 2099.6000000000004 2354.1 3559.9 3440.4 3252.1000000000004 True False 2603.79817551935 2636.06684575734 2449.5243804839697 3045.5191098140904 2509.2356972438324 2756.144113678779 2481.070142337392 2687.8008841288884 2753.588333992153 2663.211250538427 2444.513816606064 1.0651599339841058 1.078360379004618 1.0020497179618573 1.2458588244113322 1.0264763816011593 1.1274815036657795 1.0149544361267233 1.0995237031879825 1.1264359871016005 1.0894645931009708 1.0 11.255331844269834 -10.945203104045529 1.1861565162536172 0.9996338204375467 1.0904252184350232 0.0 0.06913013506703512 0.5758920504891075 1.430694318683128 0.04284410595698069 0.009848054172788213 1.1344801356794567e-11 10.945203104045529 0.09079139799747649 SSSS(ph)FTPFIDPR ddPTM_A549_PD325901_60min_R1 2 SSSSFTPFIDPR 12 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 S(0.003)S(0.003)S(0.086)S(0.895)FT(0.013)PFIDPR;S(0.003)S(0.003)S(0.062)S(0.929)FT(0.004)PFIDPR 210.87 1.7855999999999997e-31 16314500.0 4649.0 5769.1 5189.0 5422.0 6101.1 5697.2 5166.1 5800.6 6216.799999999999 6167.9 5538.7 True False 5120.963057587085 6255.28230365821 5541.156743991847 5756.904625744565 5672.579783652367 5650.803892100639 5362.698762498393 5684.902482517329 5955.52951550435 5778.457741379597 4857.475012712108 1.0542438291880913 1.2877641752737818 1.140748378425114 1.1851640225999378 1.1678042128486743 1.1633212476260555 1.1040095416783626 1.1703410656029785 1.2260545859564098 1.1896011253289536 1.0 12.245990859138884 -10.88671327179837 1.071261125139749 0.9974358119060737 1.1724429565709853 0.0 0.07937658565791089 0.30236580286194037 0.6011932477001362 0.040622257064826146 0.009184538945760318 1.2980359723738496e-11 10.88671327179837 0.17500714466491163 SSSS(ph)PPPK ddPTM_A549_MK2206_60min_R1 1 SSSSPPPK 8 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.047)S(0.047)S(0.394)S(0.512)PPPK 49.418 0.033425 1725600.0 1753.5 1426.2 1197.6 1101.7 1431.3 1086.1 860.65 1306.9 1216.7 1973.0 2154.1 True False 2049.447931041017 1498.7874882072715 1367.437688176238 1371.616549457192 1220.7576660316447 1201.0303811051683 1017.0189645659536 1492.1570772133925 941.1193926706516 1527.2979296919889 1619.1775198644327 1.265733933369214 0.9256474165555109 0.8445261074837107 0.8471069617938074 0.7539368914495885 0.74175336945496 0.6281083773020173 0.9215524912539083 0.5812329909011136 0.9432553941459509 1.0 10.661045450035926 -4.671765513620272 1.0949510917212002 0.7885199138833261 2.366723062787518 0.5461958091640872 0.12125140693837204 3.6692758772616996 1.4183051918884204 0.022602949602669734 9.178791108839487 2.1292883913740144e-05 4.671765513620272 1.578203148904192 SSSS(ph)PTEATEK ddPTM_A549_MK2206_60min_R1 2 SSSSPTEATEK 11 0 E7EME3;Q9UBG0 E7EME3 MRC2 C-type mannose receptor 2 1 SSS(0.016)S(0.911)PT(0.073)EATEK;SSS(0.014)S(0.964)PT(0.022)EATEK 160.52 2.1804e-13 62788000.0 5542.8 6243.4 5302.299999999999 4704.3 7028.9 5437.9 4718.6 4515.5 7043.5 7004.5 7431.2 True False 6478.289131550705 6561.162392282477 6054.245870087563 5856.85371118405 5994.958121127525 6013.334968614122 5575.908541452288 5155.585953138779 5448.158496158244 5422.178585163476 5585.82794931367 1.1597724080181688 1.1746087512574832 1.0838582793856815 1.0485202488028083 1.073244320363309 1.0765342261128863 0.9982241830662542 0.9229761460469339 0.9753537963566634 0.9707027560398989 1.0 12.44755542210118 -6.272768152057639 0.5543813092798087 0.9831792079578529 1.204929563047547 0.8014946267655918 0.033650280913317544 0.5730167366384458 0.2192009296408147 0.007201876112024893 0.0665160287027598 5.336196921292602e-07 6.272768152057639 0.2217503550896941 SSSS(ph)PTEATEK ddPTM_A549_PD325901_60min_R1 2 SSSSPTEATEK 11 0 E7EME3;Q9UBG0 E7EME3 MRC2 C-type mannose receptor 2 1 S(0.001)SS(0.061)S(0.939)PTEATEK;SSS(0.054)S(0.946)PTEATEK 248.6 4.704399999999999e-62 83460000.0 17864.4 18765.1 18551.0 20227.9 21217.0 19026.8 20623.0 19545.2 20493.0 20704.0 21406.0 True False 19677.980736923804 20346.500833124173 19809.982416225233 21477.331442105955 19726.791114676427 18871.85204911543 21407.81955033861 19155.35565308722 19631.75047632716 19396.74590663326 18773.19770381413 1.048195467143344 1.0838058147648655 1.0552268573936374 1.1440422553981002 1.0507954705376887 1.0052550634610988 1.140339535549088 1.0203565719225045 1.0457328999597442 1.0332148104258467 1.0 14.196386789894683 -9.621586282367462 0.3999771503918453 0.9947831053767265 1.0776804627583167 0.19656842076209313 0.04127208438690117 1.0842119257695118 0.3852263653319357 0.03572402040904712 0.01530096634598063 2.3900870436205376e-10 9.621586282367462 0.08289735738159021 SSSS(ph)SLLR ddPTM_A549_PD325901_60min_R1 1 SSSSSLLR 8 0 A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3 A0A087WWU1 TMEM237 Transmembrane protein 237 1 S(0.068)S(0.068)S(0.048)S(0.414)S(0.403)LLR 69.825 0.0068855 20215000.0 3910.2 4162.3 3576.2 4611.7 5263.5 4221.1 4623.2 5213.1 4475.7 5051.1 5426.7 True False 4307.160625462898 4513.071628593123 3818.9024374375854 4896.554235069383 4893.809918089239 4186.724761101244 4799.138405912111 5109.1206309021645 4287.601893666006 4732.172683973879 4759.2503026856075 0.9050082159016518 0.9482736442852002 0.8024168082276758 1.0288499077903712 1.0282732797910838 0.8797025781011578 1.0083811736491344 1.073513748167254 0.9008985913698521 0.9943105285518502 1.0 12.216518616644661 -6.275244482192247 24.99464263377329 0.968967989391457 0.891536955534493 0.3091183981707689 0.0640568626245316 909.8054902520769 1647235.3855871332 0.009471051994420854 0.02211795879307621 5.30585671687352e-07 6.275244482192247 -0.07743103385696404 SSSS(ph)SQESLNRPFSSK ddPTM_A549_PD325901_60min_R1 1 SSSSSQESLNRPFSSK 16 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 SSS(0.002)S(0.499)S(0.499)QESLNRPFSSK 208.62 1.2353e-46 164110000.0 17387.0 17815.0 15401.0 18001.0 19859.0 19393.0 18674.0 18600.0 20820.0 20946.0 21076.0 True False 19152.115440367117 19316.33257174795 16446.204473736456 19112.880886762807 18464.172349830744 19235.069837728646 19384.649288804885 18229.00840858228 19945.007803500306 19623.46598533327 18483.785611771782 1.0361576271567279 1.0450420156056097 0.8897638621853713 1.0340349800741235 0.998938893668592 1.040645582119195 1.0487380505246375 0.9862161784095114 1.0790542707224386 1.0616583852192951 1.0 14.173972640849753 -7.077433473710774 2.178752344793141 1.0350635974527502 0.9963336771008963 0.12032077885476211 0.046040674381493986 0.5466937007644491 5.11347002602465 0.007304515841086566 0.014279754762765601 8.366937527319964e-08 7.077433473710774 -0.038729920351853964 SSSSAS(ph)DGESEGK ddPTM_A549_MK2206_60min_R1 1 SSSSASDGESEGK 13 0 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 SSS(0.001)S(0.12)AS(0.878)DGESEGK 100.55 0.00015157 1847600.0 1135.7 991.24 686.08 625.84 271.35 84.43799999999999 151.36 198.95 233.03 1549.6 1532.9 True False 1327.378394800846 1041.6898820716413 783.3764605076434 779.1708280950253 231.4347744551714 93.37317311459186 178.86015276442552 227.1517717588219 180.24907707244338 1199.5442837560597 1152.238624112246 1.1519995659089612 0.9040574237599628 0.6798734603357042 0.6762234938056736 0.2008566364744826 0.0810363158816449 0.15522839542219838 0.19713952214875047 0.15643380919583225 1.0410554364815368 1.0 10.17022380888439 -5.733452049072945 1.391388284180135 0.4697593553868575 1.1773302353027246 0.345496720243301 0.32156315243242634 0.6875121060743652 2.00402646958646 0.05698352202405058 0.5327021255469176 1.8473447509971452e-06 5.733452049072945 0.7075708799158671 SSSSAS(ph)DGESEGK ddPTM_A549_PD325901_60min_R1 2 SSSSASDGESEGK 13 0 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 SSSS(0.008)AS(0.992)DGESEGK;SSSS(0.02)AS(0.979)DGES(0.001)EGK 123.02 6.496e-06 6843400.0 2086.58 1989.0700000000002 1679.1599999999999 1854.74 2174.52 1608.62 1465.1399999999999 1273.3600000000001 1780.56 2305.02 2726.5 True False 2298.4080655409903 2156.6959095417724 1793.117895209357 1969.3030773798373 2021.7892168867502 1595.5199320562613 1520.8967044553713 1247.9618358684054 1705.729255264193 2159.480643822827 2391.157784707522 0.9612113764471313 0.9019462970343347 0.7498952627372036 0.8235772185233338 0.8455273130936646 0.6672583224161511 0.6360503326807445 0.5219069372375407 0.7133486824554457 0.903110893657303 1.0 11.223493616595547 -4.371740972989183 16.495898797391156 0.8133622467453399 0.7863352483762953 0.0 0.14317717788511478 0.0 0.0 0.02232163320139356 0.0 4.2487289606918696e-05 4.371740972989183 -0.02702699836904454 SSSSAS(ph)DGESEGKR ddPTM_A549_MK2206_60min_R1 3 SSSSASDGESEGKR 14 1 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 SSS(0.001)S(0.002)AS(0.998)DGESEGKR;S(0.001)S(0.006)S(0.034)S(0.044)AS(0.915)DGESEGKR;S(0.001)S(0.001)S(0.008)S(0.006)AS(0.983)DGESEGKR 124.42 7.451100000000001e-07 22935700.0 5235.91 5660.279999999999 4767.54 4862.17 2001.4699999999998 1118.72 740.9300000000001 1670.8999999999999 1595.6799999999998 7188.999999999999 7135.7 True False 6119.603602290835 5948.364074989374 5443.648860961705 6053.401868271103 1707.0564143312768 1237.1022078537653 875.5473902467347 1907.7551919166406 1234.2610277773526 5564.999907022659 5363.708754698778 1.1409276458066202 1.1090020631299975 1.014903886455971 1.1285851162161131 0.3182604597678503 0.23064306143953564 0.16323544589920688 0.3556783709118037 0.23011335704909427 1.0375283524012267 1.0 12.389015186789033 -6.750954446814823 24.964117865792762 0.5210586415140945 1.0931545819912236 0.5268203841611795 0.28148041361866205 171.21051926877973 407641.0722361657 0.04949480243833361 0.1021687338629918 1.7743755855359446e-07 6.750954446814823 0.5720959404771291 SSSSAS(ph)DGESEGKR ddPTM_A549_PD325901_60min_R1 4 SSSSASDGESEGKR 14 1 A0A0J9YWJ4;K7EJD2;A0A0J9YWB6;A0A0A0MR03;Q9Y5B0-4;Q9Y5B0 A0A0J9YWJ4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 SSSS(0.002)AS(0.68)DGES(0.318)EGKR;SSS(0.01)S(0.393)AS(0.597)DGESEGKR;SSS(0.002)S(0.002)AS(0.996)DGESEGKR;SSSS(0.001)AS(0.998)DGES(0.001)EGKR 144.8 3.7657e-13 76750000.0 10151.869999999999 9682.4 9230.82 10050.86 12161.4 10455.11 10788.73 10272.47 10046.490000000002 10719.76 12264.599999999999 True False 11182.480368988301 10498.369828385756 9857.27895462995 10671.678795040762 11307.225218552374 10369.967050540674 11199.301023969585 10067.577527253186 9624.270962910072 10042.912524154319 10756.131951705072 1.0396377079788095 0.9760357975825635 0.9164334352617685 0.992148371083257 1.0512352646213068 0.9640981625273588 1.0412015280450573 0.9359849407255797 0.8947706300111373 0.9336918298554627 1.0 13.392871738357707 -8.296807529727053 24.947478328453904 0.9478456518016276 0.9939354704891686 0.27274985994738754 0.0433846509672512 850.804360885345 600126.0123196483 0.008529370599989154 0.010311687993772913 5.048850025112593e-09 8.296807529727053 0.04608981868754103 SSSSGDQSSDSLNS(ph)PTLLAL ddPTM_A549_MK2206_60min_R1 2 SSSSGDQSSDSLNSPTLLAL 20 0 P15408-3;P15408-2;P15408 P15408-3 FOSL2 Fos-related antigen 2 1 SSSSGDQSSDS(0.001)LNS(0.5)PT(0.5)LLAL;SSSSGDQSSDS(0.002)LNS(0.55)PT(0.448)LLAL 80.361 0.00020619999999999997 4429000.0 1219.0 1703.99 1366.42 1344.6599999999999 2073.3900000000003 1511.0900000000001 1644.93 1846.54 2207.1 1850.58 1662.1399999999999 True False 1424.7373983113785 1790.715812670248 1560.1989027035524 1674.1017603640819 1768.3970776031258 1670.9925408196386 1943.792488681199 2108.29269979158 1707.1953740144602 1432.5326927163721 1249.3847652697045 1.140351185572381 1.4332780921045458 1.2487737533495156 1.339940910839179 1.4154143117163607 1.3374523103448615 1.5557997365700171 1.6874647093495359 1.3664288387940509 1.146590492006785 1.0 10.287002127871004 -10.344395936233713 0.9368182521763515 1.0205286241495848 1.3942458385176737 0.4121896923067251 0.14309041370051145 0.32690891072112743 0.554212434025458 0.07142290655031637 0.02714799613284231 4.524848718125547e-11 10.344395936233713 0.3737172143680889 SSSSGDQSSDSLNS(ph)PTLLAL ddPTM_A549_PD325901_60min_R1 2 SSSSGDQSSDSLNSPTLLAL 20 0 P15408-3;P15408-2;P15408 P15408-3 FOSL2 Fos-related antigen 2 1 SSSSGDQSSDS(0.003)LNS(0.883)PT(0.114)LLAL;SSSSGDQSSDSLNS(0.5)PT(0.5)LLAL 144.33 6.566699999999999e-21 2456900.0 1005.2 967.39 1056.6 1485.7 1443.0 829.89 1035.3 1376.9 797.91 1197.7 1510.7 True False 1107.247164010871 1048.9153503554999 1128.3072298519535 1577.4683147304863 1341.6486580797505 823.131650989153 1074.6989080378983 1349.4366493428463 764.3766175067686 1122.0770175992395 1324.8934771163235 0.8357254248249699 0.7916978749404823 0.8516210920652679 1.1906378452129605 1.0126464363005963 0.6212813823951548 0.8111587283054768 1.0185246381316193 0.5769343956394598 0.8469186670323707 1.0 10.371660654742545 -7.223311110304471 24.98492856621789 0.8034873567019587 0.9378301476084402 0.1288956598107044 0.1595590291560841 1073.5503917379658 703482.9903881677 0.028835166875013737 0.04994335495552128 5.9798307166361e-08 7.223311110304471 0.1343427909064815 SSSSPLVVVSVKS(ph)PNQSLR ddPTM_A549_PD325901_60min_R1 1 SSSSPLVVVSVKSPNQSLR 19 1 Q96B01-2;Q96B01;Q96B01-3 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 SSSSPLVVVS(0.008)VKS(0.978)PNQS(0.014)LR 135.66 2.2793000000000002e-17 19797000.0 8080.6 7926.3 7993.1 9309.5 9388.1 9393.1 8766.8 9731.7 9572.5 9600.4 9440.7 True False 8900.936563376685 8594.277118352267 8535.55983241496 9884.526671591482 8728.712243186772 9316.605707872384 9100.42537137704 9537.593609129037 9170.201114265445 8994.229105585488 8279.553749528077 1.075050278390188 1.0380121173610508 1.0309202754920788 1.1938477568498045 1.054249118641726 1.1252545716492774 1.099144428151789 1.1519453702046039 1.1075719044384649 1.0863181009119176 1.0 13.015337296264423 -10.645937211633916 0.9580217232858185 1.0009996339615437 1.097397072404595 0.05706958435484977 0.052370653324501 0.46147062228132085 0.7662471915948429 0.029582584152244466 0.008277401226723215 2.259762453017764e-11 10.645937211633916 0.09639743844305126 SSSSQPVTPVS(ph)PVWSPGVAPTQPPAFPTSNPSK ddPTM_A549_MK2206_60min_R1 1 SSSSQPVTPVSPVWSPGVAPTQPPAFPTSNPSK 33 0 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 S(0.002)S(0.002)S(0.002)S(0.002)QPVT(0.027)PVS(0.469)PVWS(0.469)PGVAPT(0.027)QPPAFPTSNPSK 51.236000000000004 0.0021069 2102000.0 353.84 454.2 594.6 431.11 553.9 389.37 424.5 207.89 608.73 418.64 720.04 True False 413.55954144257424 477.3168399549446 678.9232209331923 536.7319693532634 472.4220437468933 430.5728749571122 501.6261551829982 237.3590441364236 470.85362694206117 324.06893324189275 541.2341959069618 0.7641046049382756 0.8819044390849898 1.2543982365997792 0.9916815556227857 0.87286067162708 0.7955389334474494 0.9268190350434322 0.4385514550474295 0.8699628192432264 0.5987591613623767 1.0 9.080109183388615 -5.299017894547659 5.298228917759572 0.9132467063086742 0.7612902971654019 0.0 0.20722223319224203 0.3962423255216519 29.38609257879418 0.025590261416078022 0.1803210894398784 5.023218915660638e-06 5.299017894547659 -0.15195640914327235 SSSSS(ph)LLR ddPTM_A549_MK2206_60min_R1 2 SSSSSLLR 8 0 A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3 A0A087WWU1 TMEM237 Transmembrane protein 237 1 S(0.008)S(0.049)S(0.034)S(0.301)S(0.608)LLR;SSS(0.002)S(0.016)S(0.981)LLR 106.6 0.0018934999999999998 28082000.0 2867.2 3644.3 3193.3 2885.8999999999996 4148.8 3458.3 3103.6 3605.1000000000004 4929.1 4514.6 4861.200000000001 True False 3351.1132636902244 3829.7793039361623 3646.157957292237 3592.945629552973 3538.5170158821265 3824.255010566252 3667.4839463508906 4116.133965155712 3812.6667201552646 3494.748724474126 3654.029877705298 0.9171006740083628 1.0480974245183878 0.9978456880002293 0.9832830463360399 0.9683875431539403 1.0465855886673412 1.0036819810170905 1.1264642334398787 1.0434142160188327 0.9564094551599016 1.0 11.835272715080976 -7.263460334374094 24.96747921251182 1.0300374482128247 0.9874094047640211 0.18282504446273207 0.04850770548707544 245.6061438618663 3034298.2651639925 0.006559587048292364 0.01081626870764831 5.4517968657249745e-08 7.263460334374094 -0.042628043448803665 SSSSS(ph)LLR ddPTM_A549_PD325901_60min_R1 1 SSSSSLLR 8 0 A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3 A0A087WWU1 TMEM237 Transmembrane protein 237 1 S(0.025)S(0.024)S(0.017)S(0.167)S(0.766)LLR 72.87899999999999 0.0054476 17443000.0 4404.0 5241.6 5027.2 5098.8 6603.1 5057.8 4664.0 4914.1 5667.1 5458.7 5177.5 True False 4851.090837946555 5683.328027396802 5368.376023009406 5413.74129578502 6139.321035458349 5016.610953708244 4841.49107223873 4816.084420463126 5428.931494871112 5114.036750412427 4540.700322876653 1.068357410310941 1.2516412939130641 1.1822793052346598 1.1922701149225527 1.3520647915317447 1.1048099625588346 1.066243250594331 1.060647934900934 1.1956154577124218 1.1262660794078896 1.0 12.148699109584149 -7.488237099710604 24.592964469312307 1.0898576569971192 1.2111452324042746 0.36586635814040236 0.07691297284057536 494.03367311549346 350727.0252906272 0.01340942357521656 0.021429296770387626 3.249098669296647e-08 7.488237099710604 0.1212875754071554 SSSSS(ph)NASGNGGDGKEERPEGSPTLFK ddPTM_A549_MK2206_60min_R1 1 SSSSSNASGNGGDGKEERPEGSPTLFK 27 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 S(0.002)S(0.007)S(0.091)S(0.091)S(0.425)NAS(0.383)GNGGDGKEERPEGS(0.001)PTLFK 67.35300000000001 6.8311e-05 16428000.0 4759.0 4469.7 4131.9 3182.0 4911.6 4968.3 4011.3 3944.5 6939.2 6207.2 6587.7 True False 5562.2028536208745 4697.188638367714 4717.865550914657 3961.5901428454063 4189.110146357176 5494.042208309373 4740.1012868917815 4503.644954524619 5367.482279625368 4804.989208912373 4951.792278729365 1.1232706342536933 0.9485835378322892 0.9527591799802367 0.8000315683399294 0.8459785690832948 1.109505790844512 0.9572496219708345 0.9094979556937834 1.0839473825833967 0.9703535484621214 1.0 12.273735081295746 -8.760656325234308 24.999905208266476 1.0396418195510329 0.9518246280063758 0.06562350600698019 0.09470974651780953 29.69052167955515 947902.5103377857 0.01633390271445144 0.01798959732487618 1.7351765699041922e-09 8.760656325234308 -0.08781719154465706 SSSSS(ph)QESLNRPFSSK ddPTM_A549_MK2206_60min_R1 2 SSSSSQESLNRPFSSK 16 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 SS(0.002)S(0.005)S(0.036)S(0.955)QES(0.001)LNRPFSSK;SS(0.001)S(0.002)S(0.061)S(0.936)QESLNRPFSSK 110.6 1.2734999999999999e-07 26905000.0 6715.9 7389.2 6951.0 7276.8 9252.6 7577.0 7011.6 7246.9 10608.9 9842.3 10954.9 True False 7849.37973200934 7765.27871817498 7936.756321403661 9059.616326667961 7891.554796845104 8378.793110794464 8285.516960379531 8274.170267700456 8206.001088932086 7618.917594225775 8234.495990141073 0.9532313503348813 0.943018094546664 0.9638423931356713 1.1002028949330696 0.9583531045850817 1.0175234915198397 1.006196004017677 1.0048180577908938 0.9965395694839 0.9252439497630077 1.0 13.007464634094418 -6.018014209730651 24.92427914008112 1.004309117820685 0.94945107823657 0.22041748494853908 0.040307815153711415 524.402252628423 725559.7796420897 0.004065966324163052 0.011007278027118391 9.593692412908592e-07 6.018014209730651 -0.05485803958411506 SSSSS(ph)QESLNRPFSSK ddPTM_A549_PD325901_60min_R1 3 SSSSSQESLNRPFSSK 16 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 SSSS(0.004)S(0.983)QES(0.013)LNRPFSSK;SSS(0.002)S(0.018)S(0.979)QESLNRPFSSK;SSSS(0.002)S(0.998)QESLNRPFSSK 223.76 2.4073e-55 189458800.0 23464.5 24238.0 23687.300000000003 21676.1 27161.899999999998 25274.699999999997 25103.7 27089.6 27179.0 26742.1 28785.399999999998 True False 25846.598766348063 26280.62132326841 25294.862621306253 23014.98346700512 25254.141847468054 25068.87122300008 26059.03504077174 26549.276676619906 26036.76114751847 25053.599242164666 25244.9782856849 1.0238312932518665 1.0410237246340104 1.0019760102408026 0.9116658056329446 1.0003629855284268 0.9930240754936722 1.0322462846224134 1.0516656570734546 1.031363974762559 0.9924191242569317 1.0 14.623708816013604 -7.744430664568312 24.5033745765072 1.0197262048032227 0.9941218197570598 0.12959255107779766 0.03361601394075518 350.0785375985063 504334.9585413249 0.005428574555201442 0.008040564551890738 1.8012306792833447e-08 7.744430664568312 -0.025604385046162914 SSSSSAAAS(ph)TPPPGPPAPADPLGYLPLHGGYQYK ddPTM_A549_MK2206_60min_R1 1 SSSSSAAASTPPPGPPAPADPLGYLPLHGGYQYK 34 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.017)S(0.017)S(0.017)S(0.017)S(0.017)AAAS(0.455)T(0.455)PPPGPPAPADPLGY(0.002)LPLHGGYQYK 42.661 0.013482 3291000.0 0.0 0.0 241.86 386.63 183.71 0.0 255.12 339.05 448.53 229.37 392.31 True False 0.0 0.0 276.15938482156406 481.35436735648045 156.68650235916544 0.0 301.4720016732309 387.11137579707724 346.9386711552289 177.55515769561657 294.88859979481714 0.0 0.0 0.9364871514657236 1.6323261316015805 0.5313413352302787 0.0 1.0223250470957321 1.3127376781144762 1.1765075740351716 0.602109263698763 1.0 8.20402623958233 -7.970028397001136 24.796550957759365 1.105962281895503 0.5592890686246818 0.20585175354085672 0.481069770667026 215.72942716118067 178479.95981306056 0.07531261987040914 0.10405866997224363 1.071449244618765e-08 7.970028397001136 -0.5466732132708213 SSSSSAAAS(ph)TPPPGPPAPADPLGYLPLHGGYQYK ddPTM_A549_PD325901_60min_R1 1 SSSSSAAASTPPPGPPAPADPLGYLPLHGGYQYK 34 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 SSSSSAAAS(0.525)T(0.469)PPPGPPAPADPLGY(0.004)LPLHGGYQYK 75.758 5.4915e-06 2879200.0 1570.8 1724.6 1748.7 1289.0 1875.3 1688.7 2187.9 1876.0 1631.6 1773.0 1710.5 True False 1730.2664596381587 1869.9380944842253 1867.3772977873475 1368.6186024685996 1743.5853974337883 1674.9477870867013 2271.1617317648183 1838.5817083064694 1563.0295260418382 1661.052477417928 1500.1193437528761 1.153419204174462 1.2465262195780815 1.244819157598285 0.9123398136075636 1.1622977896357423 1.1165430231013844 1.5139873645539503 1.2256236251889505 1.0419367849304433 1.1072802202939684 1.0 10.550861565244174 -8.820906170181745 5.630076784850909 1.018696720181072 1.1973730906180606 0.1787619449786233 0.13655597571767109 0.20204572641928523 12.764527915468467 0.024034270352074588 0.025609206144064433 1.5104064439505141e-09 8.820906170181745 0.1786763704369887 SSSSSAAAST(ph)PPPGPPAPADPLGYLPLHGGYQYK ddPTM_A549_PD325901_60min_R1 1 SSSSSAAASTPPPGPPAPADPLGYLPLHGGYQYK 34 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 SSSSSAAAS(0.199)T(0.798)PPPGPPAPADPLGY(0.001)LPLHGGYQYK 80.36 9.271399999999999e-06 4249600.0 650.6 713.49 572.52 745.63 498.0 737.8 835.86 972.47 594.77 862.26 713.15 True False 716.6484330535942 773.6183062933726 611.3746500424384 791.685871651405 463.0221980067333 731.7916014168102 867.6691097001426 953.0733229620434 569.7738852683896 807.8167564457874 625.4370710303205 1.1458361939963293 1.2369242920298027 0.9775158498924341 1.265812194897902 0.740317802467271 1.1700483314992594 1.3873004174037502 1.5238516664705977 0.9110011408977828 1.2916035743052803 1.0 9.288720923279074 SSSSSAS(ph)PSS(ph)PSSR ddPTM_A549_MK2206_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.001)S(0.001)S(0.006)S(0.007)S(0.074)AS(0.911)PS(0.127)S(0.866)PS(0.008)S(0.001)R 87.18 9.3486e-05 3742500.0 153.1 267.06 134.45 114.37 274.74 263.52 294.73 294.9 223.24 415.36 410.24 True False 178.93953706437406 280.6522132945126 153.51703170949827 142.3906551342644 234.3261099458773 291.405511489581 348.27862595308625 336.7029780933732 172.67649644102596 321.5298875199516 308.36608595199164 0.5802828041610013 0.9101267165229262 0.4978401928848906 0.4617584800049402 0.7598958530814529 0.9449985739837449 1.1294323267679587 1.0918936725934032 0.5599723974442161 1.0426888758772566 1.0 8.268500296404762 -6.992549807651393 23.988297417664572 0.8500939519191509 0.6237278086482086 0.34719429085542686 0.19428952685467077 154.08738105118258 496125.45039968024 0.033314336949565385 0.06286150124332786 1.0173026887521478e-07 6.992549807651393 -0.2263661432709423 SSSSSAS(ph)PSS(ph)PSSR ddPTM_A549_PD325901_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.138)S(0.152)S(0.152)S(0.167)S(0.185)AS(0.205)PS(0.087)S(0.776)PS(0.066)S(0.072)R 47.666000000000004 0.035935 9843700.0 266.67 173.38 259.58 335.36 0.0 206.09 221.34 327.43 349.98 102.25 171.87 True False 293.74214208792193 187.99134107716287 277.1966597813459 356.07442554217937 0.0 204.41167136892167 229.76321482189545 320.8991517861339 335.2715576882341 95.79391754990586 150.73107957369592 1.9487828450422833 1.2471969391372237 1.8390146250217627 2.362315897618754 0.0 1.3561348591614117 1.5243254110016433 2.1289514590734346 2.2243027691201007 0.6355286369661407 1.0 7.235833109854904 -8.006684480498313 24.040316191046724 1.6447042876392017 1.4412217557369296 0.0 0.700051052616235 874.4522085909109 3144930.0659715696 0.11267182128392618 0.15256997960426827 9.847262599147463e-09 8.006684480498313 -0.20348253190227217 SSSSSAS(ph)PSS(ph)PSSREEK ddPTM_A549_PD325901_60min_R1 1 SSSSSASPSSPSSREEK 17 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.084)S(0.091)S(0.089)S(0.089)S(0.181)AS(0.57)PS(0.243)S(0.614)PS(0.02)S(0.019)REEK 42.123000000000005 0.023493 11074000.0 1149.1 1266.4 1041.6 1092.9 991.96 1023.1 979.72 1180.7 842.79 1169.4 1001.7 True False 1265.7557860772893 1373.1239724311865 1112.2892396496254 1160.405950844013 922.288151676223 1014.7682128077238 1017.0037807233546 1157.150012258769 807.370467181173 1095.5638844289472 878.4972502994772 1.4408192918598173 1.5630373025790263 1.2661271725898393 1.320898785338752 1.0498475110329801 1.1551182572988046 1.1576630210016718 1.3171925260600417 0.9190358500336145 1.2470885754684748 1.0 9.778893960373184 -5.484251497587452 0.296231522747269 0.9491120727188693 1.9203301291468833 0.3855794312449522 0.14277051081073258 2.7672016906004826 0.19127699898158237 0.050137627762244966 0.9519243201248848 3.2790534990482386e-06 5.484251497587452 0.971218056428014 SSSSSAS(ph)PSSPS(ph)SR ddPTM_A549_PD325901_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.014)S(0.015)S(0.095)S(0.109)S(0.109)AS(0.613)PS(0.074)S(0.162)PS(0.64)S(0.169)R 57.328 0.014162000000000001 8617900.0 277.13 424.13 292.15 206.78 185.07 228.18 251.85 318.81 310.31 285.57 207.11 True False 305.26403358767675 459.87292358436446 311.9770558406665 219.55233096854687 172.07132165683953 226.3217777328379 261.43428956760806 312.4510844483934 297.2687498320931 267.539061464319 181.6367829784614 1.680628937498167 2.5318270674222214 1.7175874331448653 1.2087437762789572 0.9473374216126909 1.2460129166660876 1.4393245975877533 1.7201971942293428 1.636610960387596 1.4729343752803854 1.0 7.504912579887219 -6.015884394626624 5.007883951685736 1.3154077709133263 2.117248116973404 0.5183102400614277 0.28996340132997445 0.10972305626378222 7.893983973362374 0.045766968832086044 0.13561493081421697 9.64085620587843e-07 6.015884394626624 0.8018403460600776 SSSSSAS(ph)PSSPS(ph)SREEK ddPTM_A549_PD325901_60min_R1 1 SSSSSASPSSPSSREEK 17 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.036)S(0.038)S(0.037)S(0.046)S(0.111)AS(0.72)PS(0.186)S(0.364)PS(0.374)S(0.089)REEK 47.75 0.006868600000000001 9988100.0 1264.7 1497.7 1904.6 1038.6 2371.8 1592.2 1607.4 1840.6 1854.2 1829.0 2046.6 True False 1393.0914129770683 1623.9164351786062 2033.8576092902033 1102.7519631682599 2205.2129502658017 1579.2336510922282 1668.5704866030305 1803.8877890772328 1776.2744221541914 1713.5166278609063 1794.881174466317 0.7761468741189983 0.9047487144442613 1.1331433179106927 0.6143871688309105 1.228612223269594 0.8798541505466464 0.9296272702281569 1.0050179447748644 0.9896334350279996 0.9546685609259882 1.0 10.809672621923472 -5.408496266281756 4.012302722029371 0.9816464766762775 0.781763132868295 0.12615613162974715 0.14602629973893055 0.29394918863488145 7.4831677297846015 0.01711247981858878 0.12114351379214157 3.903945387947114e-06 5.408496266281756 -0.19988334380798245 SSSSSAS(ph)PSSPSSREEK ddPTM_A549_MK2206_60min_R1 1 SSSSSASPSSPSSREEK 17 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSS(0.001)S(0.008)AS(0.632)PS(0.059)S(0.299)PS(0.001)SREEK 108.71 6.4785999999999995e-09 10906000.0 484.83 483.03 612.31 329.04 379.32 590.54 553.98 388.81 622.98 971.52 1166.3 True False 566.6574510445489 507.61416381205817 699.1447652364667 409.65481477116685 323.5225304821657 653.0305508312737 654.630995166731 443.9250081806864 481.87602469463474 752.0529572500561 876.6755217575273 0.6463707916796109 0.5790217146640659 0.7974954790968117 0.4672821410023012 0.3690333794578631 0.7448942449335207 0.7467198283971138 0.5063732215206849 0.5496629171629968 0.8578464193255534 1.0 9.775899155851457 -10.734235439904811 0.8402502436039965 1.017430531202584 0.5983131869224948 0.4766878983133971 0.12953379466075096 0.3887447868664569 0.4550106674213718 0.1064859004988596 0.023345886698538546 1.8440154697255323e-11 10.734235439904811 -0.4191173442800892 SSSSSASPS(ph)SPSSR ddPTM_A549_MK2206_60min_R1 3 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSAS(0.109)PS(0.525)S(0.365)PSSR;SSSSS(0.001)AS(0.045)PS(0.477)S(0.477)PS(0.001)SR;SSSSSAS(0.002)PS(0.497)S(0.497)PS(0.001)S(0.001)R 131.35 8.8179e-09 284683700.0 1428.62 1544.25 1714.1999999999998 1287.93 1946.75 1586.41 1488.34 1977.8000000000002 2459.78 2498.4300000000003 2413.7200000000003 True False 1669.7361295944227 1622.8457289749524 1957.2993362322197 1603.4729078173743 1660.3856538441316 1754.2828532262686 1758.7521126149907 2258.159206758472 1902.6437574615068 1934.0329277650058 1814.3267087169486 0.9203062059176887 0.8944616871801401 1.0788020298815852 0.8837839955248824 0.9151525168354708 0.9669057093178429 0.9693690249749677 1.2446265581105798 1.048677588396973 1.065978314971018 1.0 10.825218552328765 -8.019579598599725 24.91142447529298 1.0434302796441979 0.9452796193368745 0.3884979187625889 0.07925418793080548 790.079803682981 1005229.6309387906 0.01289602123472709 0.016775290643686578 9.559174759712348e-09 8.019579598599725 -0.09815066030732333 SSSSSASPS(ph)SPSSR ddPTM_A549_PD325901_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSS(0.001)S(0.001)S(0.001)AS(0.017)PS(0.49)S(0.49)PSS(0.001)R 68.676 0.0031733 6954700.0 318.82 258.73 289.28 127.33 320.09 416.32 324.06 67.565 279.1 523.34 287.18 True False 351.1863716971208 280.53408511301416 308.9122803819543 135.19488491258863 297.6079826505524 412.92962795045605 336.3922806324361 66.21736307128289 267.3703975963945 490.29622308623715 251.85868058401098 1.3943786685564634 1.1138551367874656 1.2265302099798474 0.5367886649731435 1.1816467153741048 1.6395290684162764 1.3356390172949697 0.26291475409042003 1.0615889711500708 1.9467116318934736 1.0 7.976470645685199 -5.239387444733788 1.6010119806619096 1.0262862027861468 1.5331138658287031 0.0 0.44749152727965674 2.2613616936825562 5.167087469816498 0.04884077729621704 1.808038873661134 5.762521453696753e-06 5.239387444733788 0.5068276630425563 SSSSSASPS(ph)SPSSREEKESK ddPTM_A549_MK2206_60min_R1 1 SSSSSASPSSPSSREEKESK 20 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSAS(0.012)PS(0.492)S(0.492)PS(0.002)SREEKESK 69.398 0.00034353 4913700.0 357.98 853.64 781.1 554.2 557.21 298.52 540.95 320.0 761.08 1333.8 1064.8 True False 418.39827222929193 897.0866298087601 891.8717253126752 689.9790248789833 475.2451471316238 330.1091882584612 639.2336128297835 365.3609799588991 588.6965951950191 1032.4936536356693 800.3807730150172 0.5227490293815962 1.1208248124570184 1.1143092830091526 0.8620634679664368 0.5937738176060696 0.4124401777106001 0.7986618799222328 0.4564839539842919 0.735520660969168 1.2900030690970847 1.0 9.644542700585275 -2.818337979984737 7.36981497486197 0.8123801256298896 0.7879538952800047 0.0 0.2822760050226454 0.0 0.0 0.033675740708880755 0.0 0.0015193646578958336 2.818337979984737 -0.024426230349884892 SSSSSASPSS(ph)PSSR ddPTM_A549_MK2206_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.005)S(0.994)PS(0.001)SR 136.24 4.133e-09 294910000.0 772.21 878.56 784.24 1050.7 1575.8 970.49 740.44 1307.8 1458.4 1399.4 1534.0 True False 902.5401692781212 923.2749513668348 895.4570245285006 1308.1215471677147 1344.001907449638 1073.186607640875 874.9683635893973 1493.184654969527 1128.07472858624 1083.2745680744902 1153.0654637537907 0.7827310743831599 0.800713385657328 0.7765881926715167 1.1344729230803086 1.1655902892748657 0.9307247865590641 0.7588193308131426 1.2949695415457874 0.9783266987407692 0.9394736050353142 1.0 10.171258707063679 -6.241340583321314 23.889045816098935 1.0109591981903117 0.7880810660055666 0.384221471687911 0.1336398962269801 379.8284201018706 451455.0117978827 0.017716542900565225 0.04679266680748859 5.736664038978854e-07 6.241340583321314 -0.22287813218474506 SSSSSASPSS(ph)PSSR ddPTM_A549_PD325901_60min_R1 3 SSSSSASPSSPSSR 14 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.005)S(0.989)PS(0.005)SR;SSSSSASPS(0.004)S(0.995)PSSR;SSSSSAS(0.004)PS(0.002)S(0.891)PS(0.087)S(0.016)R 172.3 1.2527e-22 764427700.0 6032.6 5755.58 5377.61 5352.23 5636.2699999999995 4837.72 5298.51 5158.43 5972.870000000001 6308.46 5367.320000000001 True False 6645.025111034605 6240.62292580977 5742.56695279591 5682.825091303734 5240.397839275924 4798.323212260955 5500.147697505925 5055.541066939948 5721.851045114932 5910.14275899148 4707.173666244777 1.4116804652197545 1.325768575432299 1.219960715275061 1.2072690523520238 1.1132790525352625 1.0193639649775008 1.1684607553249156 1.0740077646153825 1.2155597925239987 1.2555608052817797 1.0 12.200645365394418 -2.000000000004316 0.3782859532625722 1.090240953207721 5.940614449219756 0.5754219651975119 0.07813602381646347 28.142167487593944 0.33665470082103477 0.019399872810135665 101.30043431316041 0.009999999999900618 2.000000000004316 4.850373496012034 SSSSSASPSS(ph)PSSREEK ddPTM_A549_MK2206_60min_R1 3 SSSSSASPSSPSSREEK 17 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.011)S(0.989)PSSREEK;SSSSSAS(0.001)PS(0.196)S(0.793)PS(0.009)S(0.002)REEK;SS(0.002)S(0.002)S(0.002)S(0.009)AS(0.011)PS(0.05)S(0.922)PS(0.002)SREEK 136.61 5.0886e-13 431226100.0 9461.26 11064.599999999999 8699.0 7449.610000000001 9534.24 6727.24 8002.27 5904.16 12198.52 14830.0 15172.2 True False 11058.08938240157 11627.740879272304 9932.649005882671 9274.764784425699 8131.765925931361 7439.112071619495 9456.178875939346 6741.092760731673 9435.574697033611 11479.892700117683 11404.524008582313 0.9696230525780787 1.0195726599831796 0.8709393744454391 0.8132531245886374 0.7130298397207911 0.6522948319475057 0.8291603287277253 0.5910893567902316 0.8273536615761432 1.006608666129218 1.0 13.477318613592026 -5.832254904901513 5.376540549471798 0.8477094993281886 0.9943150831740284 0.1995416543118762 0.12578136151489153 0.29176446680328 15.193100139400457 0.02022874191855931 0.06664242179566203 1.4714485965546339e-06 5.832254904901513 0.14660558384583977 SSSSSASPSS(ph)PSSREEK ddPTM_A549_PD325901_60min_R1 4 SSSSSASPSSPSSREEK 17 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.007)S(0.99)PS(0.002)SREEK;SSSSSAS(0.035)PS(0.191)S(0.772)PS(0.001)SREEK;SSSSSASPS(0.036)S(0.96)PS(0.004)SREEK;SSSSSASPS(0.018)S(0.981)PS(0.001)SREEK 250.52 4.7389999999999994e-86 643567000.0 21046.98 17789.100000000002 18449.999999999996 19305.530000000002 22214.47 23510.899999999998 24017.979999999996 25370.0 23117.8 22261.9 24577.3 True False 23183.653915632232 19288.24988785187 19702.1279488629 20497.988742060224 20654.202262961117 23319.43502541405 24931.99737204296 24863.97544762003 22146.239260315033 20856.279834760382 21554.447908341164 1.0755856060066653 0.894861699537555 0.9140632148243774 0.9509864891565091 0.9582338805796241 1.0818850533578208 1.156698491098663 1.1535426726470752 1.0274556488057789 0.967609095043877 1.0 14.395697989614037 -7.193084369763979 7.896862214765422 1.0412382338736041 0.9519619750984587 0.3299344555050817 0.07065888527337101 0.3620926461771622 38.22219471624954 0.011106293851702831 0.01927016492243263 6.410850218224518e-08 7.193084369763979 -0.08927625877514545 SSSSSASPSS(ph)PSSREEKESK ddPTM_A549_MK2206_60min_R1 2 SSSSSASPSSPSSREEKESK 20 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.001)S(0.001)S(0.001)S(0.001)S(0.001)AS(0.002)PS(0.056)S(0.887)PS(0.016)S(0.016)REEKES(0.018)K;SSSSSASPS(0.059)S(0.782)PS(0.068)S(0.068)REEKES(0.023)K 60.272 0.00050991 40710000.0 1387.8200000000002 1636.4699999999998 1358.3000000000002 1038.67 1882.27 1202.15 901.9100000000001 840.6300000000001 1977.24 2067.9300000000003 2398.7 True False 1622.0500870586527 1719.7593330714856 1550.927364604028 1293.1441966276689 1605.3905764279923 1329.3607150774137 1065.7753724878633 959.7918768214043 1529.3982970034679 1600.7831767602402 1803.0365892478615 0.8996212815266785 0.9538127752520458 0.8601752032392194 0.717203524509231 0.890381585155564 0.7372899268960248 0.5911002465748366 0.5323196892092925 0.8482347535950215 0.8878262295431334 1.0 10.816212958520987 -9.7152337305763 1.33802394047555 0.9676297852917041 0.7784171426164916 0.18964655676479947 0.1273727316004795 0.3838036538303126 1.3916560171911425 0.036679700088140636 0.025903225791090716 1.926487828177312e-10 9.7152337305763 -0.18921264267521243 SSSSSASPSS(ph)PSSREEKESK ddPTM_A549_PD325901_60min_R1 1 SSSSSASPSSPSSREEKESK 20 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;H0YF63;Q9NYF8-4 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.001)S(0.999)PSSREEKESK 255.2 3.188199999999999e-98 53636000.0 5065.7 4318.2 4925.1 4633.7 5297.2 9397.4 6705.6 7772.6 5892.0 7192.1 7302.0 True False 5579.966134828762 4682.109868724219 5259.346903032233 4919.913125103762 4925.142946347925 9320.870690098038 6960.785277445112 7617.5693955132565 5644.379729981925 6737.989578588538 6403.900291191761 0.8713386969037792 0.7311340988809933 0.8212724533306986 0.7682682273911808 0.7690848892700919 1.4554990343804104 1.0869602837226116 1.1895202999944947 0.8813971912937936 1.0521696578968132 1.0 12.64473512991116 SSSSSGVPYS(ph)PAIPNK ddPTM_A549_MK2206_60min_R1 4 SSSSSGVPYSPAIPNK 16 0 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK 212.11 3.2025999999999998e-46 109425000.0 9371.8 9499.5 8561.7 8344.099999999999 12799.0 8637.0 8767.9 10368.400000000001 13931.900000000001 12848.4 14139.5 True False 10953.53072148858 9982.983974354906 9775.877801318045 10388.404874580881 10916.284054732781 9550.961607223411 10360.913936464105 11838.152451893287 10776.346894672684 9945.937516398653 10628.271919652367 1.0306031690095159 0.93928571359712 0.9197993686294205 0.9774312280599488 1.0270986795650063 0.8986373024163092 0.9748446421761284 1.1138360536301082 1.013932177887406 0.93580006153286 1.0 13.375619423679401 -8.022050898274491 24.886565173010762 1.0162135245391828 0.9631526313470058 0.16292338600059342 0.05369821344185673 837.9814223130173 945741.3910532898 0.007528729456902996 0.009764298990151899 9.504933915763699e-09 8.022050898274491 -0.053060893192176994 SSSSSGVPYS(ph)PAIPNK ddPTM_A549_PD325901_60min_R1 2 SSSSSGVPYSPAIPNK 16 0 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK 206.67 3.3616999999999993e-40 199064000.0 8482.3 7660.6 8207.7 7724.200000000001 9237.3 8809.5 8699.1 9296.3 8370.8 8946.0 9643.099999999999 True False 9343.416851660773 8306.185646878035 8764.723878909599 8201.306291069008 8588.503914955007 8737.758352780416 9030.149010830168 9110.878003693733 8019.00438624113 8381.148033266092 8457.059832647386 1.104806757496467 0.9821599718158643 1.0363795518005579 0.9697585748901675 1.0155425271795049 1.0331910292332838 1.0677645883467024 1.077310339998112 0.9482023947950327 0.9910238545211367 1.0 13.04594047021582 -8.772731284635034 24.99992270709647 0.9755400204582663 1.0321845448911573 0.28474669744055414 0.039146211900084535 201.05665448129497 445131.85165606486 0.0070254983628386435 0.007511719704626102 1.6875968861028085e-09 8.772731284635034 0.05664452443289103 SSSSSGVPYS(ph)PAIPNKR ddPTM_A549_MK2206_60min_R1 4 SSSSSGVPYSPAIPNKR 17 1 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSSGVPYS(1)PAIPNKR;SSSSSGVPY(0.014)S(0.985)PAIPNKR;SSSSSGVPYS(1)PAIPNKR;SSSSSGVPY(0.003)S(0.997)PAIPNKR 162.09 8.2293e-23 252949500.0 22528.860000000004 23275.34 21667.82 21949.55 34219.799999999996 26770.85 27070.77 25655.620000000003 41190.700000000004 33218.9 32452.9 True False 26331.180790255337 24459.955388984876 24740.642692567497 27327.190735352757 29186.112750694956 29603.72357794798 31989.178499277372 29292.382702041054 31861.07221803155 25714.727418471986 24393.94927552503 1.0794144274405775 1.0027058395799024 1.0142122709663217 1.1202446322527493 1.1964488579132206 1.2135683010397185 1.3113570967113881 1.2008052640918923 1.3061055369988182 1.0541436783371572 1.0 14.574235722717646 -6.440262544207471 3.558854655669302 1.1729303594697784 1.0298166129334154 0.3504495203750817 0.08921919454188963 0.2980630875572354 7.139601432402365 0.01735577749965153 0.04215230801521108 3.628586293876091e-07 6.440262544207471 -0.143113746536363 SSSSSGVPYS(ph)PAIPNKR ddPTM_A549_PD325901_60min_R1 6 SSSSSGVPYSPAIPNKR 17 1 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSSGVPYS(0.999)PAIPNKR;SSSSSGVPYS(1)PAIPNKR;SSSSSGVPYS(1)PAIPNKR;SSSS(0.001)S(0.018)GVPYS(0.981)PAIPNKR;SSSSSGVPYS(1)PAIPNKR;SSSSSGVPYS(1)PAIPNKR 213.99 3.3095e-55 412619100.0 28122.500000000004 24401.819999999996 24944.199999999997 26883.4 33745.9 30110.4 28472.7 28758.999999999996 39492.2 29523.5 30181.600000000002 True False 30977.475497309697 26458.247009594743 26637.063413659933 28543.926561368782 31375.704401034956 29865.190885471304 29556.24417935927 28185.37918400095 37832.480171824885 27659.38117148796 26469.45453692592 1.170310308211864 0.9995765863888301 1.0063321620965098 1.0783722997218885 1.1853551555913109 1.128288867600509 1.116617047704068 1.0648265964333057 1.4292882431350107 1.044954709319833 1.0 14.692040844689515 -7.084801739539239 0.9835332747334178 1.1910473269368758 1.0528728146905606 0.0 0.12031885477530918 0.9677938895978169 1.828438685366475 0.027386438333570146 0.07106893110394787 8.226180989314413e-08 7.084801739539239 -0.13817451224631516 SSSSSNAS(ph)GNGGDGKEERPEGSPTLFK ddPTM_A549_MK2206_60min_R1 1 SSSSSNASGNGGDGKEERPEGSPTLFK 27 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 S(0.02)S(0.02)S(0.018)S(0.007)S(0.018)NAS(0.645)GNGGDGKEERPEGS(0.053)PT(0.219)LFK 53.481 0.0013304 18006000.0 3876.6 3876.5 3311.0 3017.9 4366.0 3641.5 3117.0 4034.7 5536.2 4912.2 5680.1 True False 4530.875306229604 4073.7972921297737 3780.549587133872 3757.2856354786777 3723.767183605229 4026.841112967934 3683.3185528984814 4606.631080750532 4282.259539494749 3802.530608328933 4269.574407215061 1.06120068983292 0.9541459882384418 0.8854628650446291 0.8800140897250374 0.8721635527214412 0.9431481288071857 0.8626898612363146 1.0789438574875019 1.00297105310034 0.8906111583166507 1.0 12.059876553289783 -8.255550053067722 24.999887292311954 1.0072577632263966 0.9196696225096609 0.19419696730357439 0.06662887082977424 403.6302590961338 1713391.2170190427 0.009027558991745444 0.011494885675788151 5.552006257562612e-09 8.255550053067722 -0.08758814071673571 SSSSSNAS(ph)GNGGDGKEERPEGSPTLFK ddPTM_A549_PD325901_60min_R1 2 SSSSSNASGNGGDGKEERPEGSPTLFK 27 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 S(0.018)S(0.018)S(0.017)S(0.016)S(0.016)NAS(0.321)GNGGDGKEERPEGS(0.297)PT(0.297)LFK;S(0.149)S(0.149)S(0.195)S(0.056)S(0.017)NAS(0.373)GNGGDGKEERPEGS(0.041)PT(0.02)LFK 56.688 0.00074127 72977000.0 11543.7 12223.2 14765.0 12596.8 14620.0 13112.2 12800.3 13378.5 14379.1 15946.099999999999 16083.0 True False 12715.607925977214 13253.291961324137 15767.041689157759 13374.875726591496 13593.141636261931 13005.418590536063 13287.422421092928 13111.655322269777 13774.796431667202 14939.260524621548 14104.892958536982 0.9015033267786053 0.9396237178320865 1.1178419953633723 0.9482436886198669 0.9637181704406119 0.9220501444971645 0.9420434781145021 0.929582050768698 0.9765970200667146 1.0591544769986763 1.0 13.783908096960078 -9.471596050483623 1.5406175030197344 0.9937346516729715 0.961270133316987 0.12916899069837595 0.057323444059615876 0.7903234781211042 3.8326712862170136 0.01272300585265006 0.010326427196743487 3.37601175019479e-10 9.471596050483623 -0.03246451835598452 SSSSSNASGNGGDGKEERPEGS(ph)PTLFK ddPTM_A549_MK2206_60min_R1 1 SSSSSNASGNGGDGKEERPEGSPTLFK 27 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 SSSSSNASGNGGDGKEERPEGS(0.632)PT(0.368)LFK 118.83 3.7706000000000006e-18 27659000.0 5292.4 4674.5 5737.2 3980.5 6942.1 5707.4 5022.8 5080.1 7611.3 6477.4 6502.0 True False 6185.627733242932 4912.4120835961885 6550.821229629851 4955.722678691435 5920.926286144262 6311.353279734502 5935.37774382371 5800.219732153761 5887.3527027485225 5014.150841250323 4887.373953929037 1.26563422229441 1.0051230231005799 1.340356046290164 1.0139847544727882 1.2114739616730854 1.2913587826977524 1.214430857915459 1.186776331590275 1.2046045091384068 1.0259396740491624 1.0 12.2548437802511 -10.657515609243818 0.818150029047741 0.9938192326162256 1.1908519126717858 0.3308093513358188 0.09808439471727712 0.5764790836074412 0.6536207970046457 0.07151705679798201 0.016892860154737423 2.2003126254332554e-11 10.657515609243818 0.19703268005556018 SSSSSNASGNGGDGKEERPEGS(ph)PTLFK ddPTM_A549_PD325901_60min_R1 1 SSSSSNASGNGGDGKEERPEGSPTLFK 27 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 SSSSSNASGNGGDGKEERPEGS(0.598)PT(0.402)LFK 140.06 4.1985e-26 45998000.0 7502.4 6552.8 6069.6 6339.8 8082.4 6774.6 6890.1 6700.8 7552.9 7841.4 8498.3 True False 8264.038125025027 7105.027453053599 6481.519555469827 6731.395047269531 7514.7201067663 6719.4299037114715 7152.306525907395 6567.147287324089 7235.477878917259 7346.2926657783055 7453.062975162273 1.1088109885244994 0.9533030214197142 0.8696450810988494 0.9031716315429322 1.0082727238196567 0.9015662320450435 0.9596465976126641 0.8811340128494091 0.9708059495847374 0.9856743046798632 1.0 12.863617734522775 -9.163584163843387 2.964540242801527 0.9891657940284448 0.9445093041082288 0.06095898266676236 0.06394227341292542 0.43764632100549866 7.989072000636301 0.011988067606281806 0.011465649803186196 6.861448944803274e-10 9.163584163843387 -0.04465648992021609 SSSSSNASGNGGDGKEERPEGS(ph)PTLFKR ddPTM_A549_PD325901_60min_R1 1 SSSSSNASGNGGDGKEERPEGSPTLFKR 28 3 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 SSSSS(0.001)NAS(0.001)GNGGDGKEERPEGS(0.957)PT(0.041)LFKR 44.534 0.011056 6893600.0 1643.8 1779.3 2133.1 2650.1 2458.3 2457.6 2374.1 2361.2 2266.9 2630.5 2791.7 True False 1810.6773658983977 1929.247855453893 2277.864993372328 2813.790658186218 2285.6374886746016 2437.586120414684 2464.447674657368 2314.104013674433 2171.6300763571003 2464.4097810760622 2448.338598044376 0.739553494498141 0.7879824534869851 0.9303717203134344 1.1492653264682218 0.9335463201455335 0.9956082554764768 1.0065795950878116 0.9451731943951039 0.886981105510366 1.0065641178244396 1.0 11.25758737698158 -5.754578523487959 3.8606016524944646 0.9654159974270461 0.7537241048477222 0.6217139371244518 0.06568258374760545 0.11655435302713062 3.7523868963534643 0.009843549612437415 0.03951937658546088 1.7596304815065054e-06 5.754578523487959 -0.21169189257932386 SSSSSNASGNGGDGKEERPEGSPT(ph)LFK ddPTM_A549_MK2206_60min_R1 1 SSSSSNASGNGGDGKEERPEGSPTLFK 27 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 SSSSSNASGNGGDGKEERPEGS(0.354)PT(0.646)LFK 109.56 3.3660999999999997e-13 30394000.0 9160.6 9259.1 9004.9 8911.7 12069.0 10423.0 9816.7 10347.0 13396.0 13245.0 12353.0 True False 10706.685324832826 9730.34864118633 10281.930225666507 11095.066900061422 10293.666087707625 11525.954941772556 11600.267320577 11813.718936358535 10361.827389016235 10252.945300948 9285.40917454405 1.1530655379393733 1.0479181324461266 1.1073211780321346 1.194892620400461 1.1085850816276048 1.241297472745839 1.2493006072773978 1.272288459699315 1.115925770662125 1.1041996220324304 1.0 13.180749770598643 -9.776934113873876 1.0926624468197101 1.0200785352687118 1.1665888029873577 0.25424246838980236 0.0711234719107788 0.31176641967239 0.7613841406402676 0.02228301234375976 0.014216589474793834 1.671344152045275e-10 9.776934113873876 0.14651026771864584 SSSSSSSSGSPS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 SSSSSSSSGSPSPSR 15 0 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 SSSSSS(0.001)S(0.002)S(0.002)GS(0.002)PS(0.976)PS(0.017)R 59.898 0.0058015 3433500.0 163.69 252.27 252.11 313.3 415.51 217.45 374.9 377.91 332.89 392.07 233.36 True False 180.30768829779092 273.529678241642 269.2197006605869 332.6518294440747 386.32601103168184 215.67915929531767 389.16702465315154 370.3722885853404 318.89979095615803 367.314633288915 204.65819939092148 0.8810186390498912 1.3365195191577337 1.3154601255254146 1.6254019161415085 1.887664467787842 1.0538505661497826 1.9015462161366732 1.8097114588499106 1.5582067657451708 1.7947711568951137 1.0 7.6770726575997275 -10.648497943662564 1.008354403556097 1.0108962608594303 1.499098836207485 0.0 0.3881722430928842 0.5704717194411674 1.0662323951377657 0.1883969523822772 0.055167994732249585 2.2464774127944474e-11 10.648497943662564 0.4882025753480548 SSSSTPT(ph)SPKPLLQSPKPSLAAR ddPTM_A549_MK2206_60min_R1 1 SSSSTPTSPKPLLQSPKPSLAAR 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.016)S(0.016)S(0.066)S(0.058)T(0.333)PT(0.437)S(0.075)PKPLLQSPKPSLAAR 85.537 4.5286e-06 36521000.0 3623.8 3481.8 3781.5 3190.3 4583.7 2998.9 3547.4 2827.0 4916.9 4576.7 4467.1 True False 4235.408846596201 3659.0087480297816 4317.773561989347 3971.9236432180087 3909.4438019906756 3316.24160749129 4191.916661710645 3227.7359073244006 3803.2300006758655 3542.8202913438054 3357.7957843119666 1.2613658240875012 1.0897055637287767 1.2858952239330679 1.1828961313774122 1.164288733774721 0.987624566980868 1.2484132243228707 0.9612662933239652 1.1326567322661558 1.0551029660279807 1.0 11.713298775235005 -2.000000518645232 0.03649673490976067 0.5819588585034656 2.0188660244930907 0.33423234567134674 0.08941688947387276 570.792534823083 1.5470082762283883 17.40017626477066 52.440307666610025 0.009999988057759332 2.000000518645232 1.436907165989625 SSSSTPT(ph)SPKPLLQSPKPSLAAR ddPTM_A549_PD325901_60min_R1 2 SSSSTPTSPKPLLQSPKPSLAAR 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.052)S(0.052)S(0.055)S(0.052)T(0.052)PT(0.392)S(0.345)PKPLLQSPKPSLAAR;S(0.004)S(0.003)S(0.006)S(0.021)T(0.093)PT(0.436)S(0.436)PKPLLQSPKPSLAAR 90.166 3.5887e-07 78771000.0 7514.8 6934.5 7400.8 7917.6 10382.2 8752.3 8913.2 8767.3 10143.599999999999 9626.599999999999 10128.099999999999 True False 8277.696963896633 7518.894651629869 7903.062792625716 8406.652169825737 9652.990088645589 8681.024170615818 9252.396703490185 8592.429323686203 9717.29976731919 9018.774833114161 8882.4079073157 0.9319203813054996 0.84649283506077 0.8897432852770272 0.9464384272311877 1.086753748462196 0.977327799083172 1.0416541100155685 0.9673536065157887 1.0939938661582809 1.0153524728003254 1.0 13.116735110453575 -6.547244003556661 4.0027896427400895 1.0364217866979033 0.8879423448665393 0.665824108493735 0.04247683274472275 0.09587193241065678 3.431446667733826 0.006714682074943193 0.015060295236766535 2.8363250228173303e-07 6.547244003556661 -0.14847944183136397 SSSSTPTS(ph)PKPLLQSPK ddPTM_A549_MK2206_60min_R1 2 SSSSTPTSPKPLLQSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.019)S(0.019)S(0.016)S(0.014)T(0.018)PT(0.14)S(0.775)PKPLLQSPK;SSSSTPT(0.131)S(0.869)PKPLLQSPK 128.32 1.5782e-12 44915000.0 7003.200000000001 7504.0 7180.0 6292.4 8289.5 6809.1 7952.1 7337.4 10580.4 9312.4 9634.0 True False 8185.168948198726 7885.921547824535 8198.231964850855 7834.038282476571 7070.1255310342485 7529.634442485229 9396.893636350345 8377.49891984509 8183.9562934269425 7208.722372257316 7241.61191512648 1.130296547803303 1.0889732341707241 1.1321004302545072 1.081808632427901 0.9763193076207209 1.0397732619110835 1.2976245822731611 1.1568555479127425 1.1301290913328381 0.9954582566347606 1.0 12.822095148147723 -10.679610541855824 1.024796546718858 1.0022594376254386 1.1138011629746234 0.25982779255929056 0.07562561969533371 0.638028240892448 1.2272329599495504 0.049039952418062686 0.01403954474328517 2.0911705694684238e-11 10.679610541855824 0.11154172534918483 SSSSTPTS(ph)PKPLLQSPK ddPTM_A549_PD325901_60min_R1 2 SSSSTPTSPKPLLQSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.019)S(0.019)S(0.016)S(0.014)T(0.103)PT(0.148)S(0.68)PKPLLQSPK;S(0.065)S(0.065)S(0.057)S(0.05)T(0.11)PT(0.11)S(0.543)PKPLLQSPK 105.67 3.2036e-09 61761000.0 7589.1 7538.799999999999 7998.9 7879.9 8824.099999999999 7752.6 7464.0 8799.6 8718.0 10412.8 10967.1 True False 8359.539845199864 8174.121133420902 8541.75345529319 8366.623526448653 8204.325657492394 7689.465395966339 7748.046604457523 8624.085074847346 8351.612777661652 9755.334030940438 9618.2162261749 0.8691361941365293 0.8498583252033725 0.8880808306271764 0.8698726801004767 0.8529986709141805 0.7994689675451794 0.8055596196072283 0.8966407982571512 0.8683120218210183 1.0142560534657545 1.0 13.231553644325878 -10.410461327778469 0.6110771186846989 1.0093701931298684 0.851400145338489 0.8030142007519546 0.028913202011743404 0.3392940995409745 0.2131809526268715 0.02778319344357032 0.006725397504472787 3.8863210257927924e-11 10.410461327778469 -0.15797004779137946 SSSSTPTS(ph)PKPLLQSPKPSLAAR ddPTM_A549_MK2206_60min_R1 1 SSSSTPTSPKPLLQSPKPSLAAR 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.027)S(0.027)S(0.025)S(0.024)T(0.022)PT(0.117)S(0.758)PKPLLQSPKPSLAAR 52.685 0.0015582 27679000.0 2369.8 2864.6 2801.9 2701.5 3259.3 2532.9 2433.8 2632.6 4274.4 3339.4 3757.6 True False 2769.764303952669 3010.395904304127 3199.2515518545442 3363.367621274945 2779.8612875686013 2800.929796797054 2875.9899563825243 3005.7791119993685 3306.2552248141956 2585.027220685975 2824.4842155158044 0.9806265826296563 1.0658214649482016 1.132685229494299 1.1907900220503553 0.9842013888050516 0.991660630075623 1.0182354500633362 1.0641869037495952 1.1705695527175783 0.9152209831747634 1.0 11.46377172293117 -13.126832283809561 9.599927580793889 1.073177522977403 1.0706243520125882 0.0 0.08635618207806553 0.0 0.0 0.0 0.011015570320937076 7.467370782569287e-14 13.126832283809561 -0.002553170964814777 SSSSTPTSPKPLLQS(ph)PKPSLAAR ddPTM_A549_MK2206_60min_R1 2 SSSSTPTSPKPLLQSPKPSLAAR 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SSSSTPTS(0.001)PKPLLQS(0.984)PKPS(0.014)LAAR;SSSSTPTSPKPLLQS(0.822)PKPS(0.178)LAAR 92.12100000000001 1.7197e-07 25206000.0 4240.7 5498.7 5359.5 5150.6 6811.700000000001 5453.299999999999 5760.7 5593.4 7739.1 7722.8 6816.8 True False 4956.4264848392595 5778.56034315336 6119.557690197521 6412.497231219223 5809.707953404424 6030.364586392431 6807.344622291396 6386.281579069082 5986.206206803191 5978.214116282459 5124.000425891032 0.9672962671499715 1.1277439232742654 1.1942929706399015 1.2514630558611106 1.1338226913582177 1.1768860431630015 1.3285214786272468 1.246346808794136 1.1682680931397906 1.1667083566338472 1.0 12.323054880253991 -10.34375375449196 0.8945848105544469 1.007905141489061 1.181772785550308 0.0334926196551385 0.0984252290934095 0.46219088941052305 0.7090662468887198 0.04647487825186745 0.017004955144515683 4.5315444620609475e-11 10.34375375449196 0.173867644061247 SSSSTPTSPKPLLQS(ph)PKPSLAAR ddPTM_A549_PD325901_60min_R1 2 SSSSTPTSPKPLLQSPKPSLAAR 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SSSSTPTS(0.005)PKPLLQS(0.978)PKPS(0.016)LAAR;SSSSTPTSPKPLLQS(0.989)PKPS(0.011)LAAR 95.34700000000001 1.0359999999999999e-07 58917000.0 8059.1 7874.2 8110.5 8217.5 10216.4 8547.400000000001 8932.9 8333.2 9397.6 7408.799999999999 7952.7 True False 8877.253899204152 8537.786468507305 8660.927302398506 8725.076311703424 9498.835308666641 8477.792808281436 9272.84639777044 8166.987788731062 9002.651553034315 6941.007103606278 6974.568316318914 1.272803347331674 1.224131169312775 1.2417868618669765 1.2509844216865318 1.3619244773101602 1.2155293953383919 1.3295226280993009 1.1709667779183057 1.2907826183263764 0.995188058788655 1.0 12.767888210252092 -10.798947189574646 0.7024135847540055 0.9693958392845221 1.2652504697795186 0.8016500431497314 0.050664232539024974 0.3077653541616759 0.22301667954556112 0.05535571384763464 0.009324875517129499 1.588739928418926e-11 10.798947189574646 0.2958546304949965 SSSSVGS(ph)PTR ddPTM_A549_MK2206_60min_R1 3 SSSSVGSPTR 10 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SSSSVGS(0.955)PT(0.045)R;SSSSVGS(0.998)PT(0.002)R;SSSSVGS(0.997)PT(0.003)R 112.94 0.00012085 198919100.0 4333.65 4842.73 5417.829999999999 5663.260000000001 7680.259999999999 6195.52 6673.409999999999 6264.620000000001 8948.800000000001 9429.07 9353.32 True False 5065.064172429942 5089.20427202776 6186.1597612991545 7050.758954233402 6550.503927978897 6851.125814146663 7885.88221498179 7152.649069594121 6921.911088297136 7299.0365382264745 7030.632505500396 0.720427951321208 0.723861511470872 0.8798866611872302 1.0028626796689002 0.931709049342876 0.9744679171876361 1.1216461973815715 1.0173549910336326 0.9845360403750015 1.0381763706915548 1.0 12.77943877075944 -5.939253054459416 2.0543418898976085 0.9992553024229729 0.708016003051983 0.8547707511205308 0.0456262226818852 0.08816983643876702 0.7128488388335612 0.006397784131196945 0.02887393432542919 1.1501300365536414e-06 5.939253054459416 -0.2912392993709899 SSSSVGS(ph)PTR ddPTM_A549_PD325901_60min_R1 4 SSSSVGSPTR 10 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SSSSVGS(1)PTR;SSSSVGS(0.999)PT(0.001)R;SSSSVGS(0.992)PT(0.007)R;SSS(0.001)S(0.001)VGS(0.985)PT(0.013)R 162.0 7.4236999999999995e-09 246765600.0 11049.0 9907.12 9730.3 10908.300000000001 12147.599999999999 10966.82 11468.7 11498.400000000001 10935.800000000001 12669.6 12793.199999999999 True False 12170.686346156104 10742.027771440662 10390.656671047189 11582.08091645323 11294.394482944956 10877.509853957585 11905.147654413446 11269.055391679705 10476.206356268904 11869.639293792536 11219.717502776557 1.084758715461794 0.9574240856583349 0.9261067997902621 1.0322970176020028 1.0066558699138297 0.9694994416094447 1.0610915695040686 1.0043974270199707 0.9337317408995676 1.0579267517970163 1.0 13.453748730854965 -8.683328606337867 24.999999999498822 0.9687058082656481 1.002659116480307 0.0 0.05241532221811982 60.15805458052597 19251.34798842108 0.0079642985393595 0.009030664600475136 2.073344140282044e-09 8.683328606337867 0.033953308214658806 SSSSVGSPT(ph)R ddPTM_A549_MK2206_60min_R1 1 SSSSVGSPTR 10 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SSSSVGS(0.389)PT(0.611)R 76.899 0.0015264 2913400.0 594.82 586.16 363.83 278.35 397.86 401.91 496.74 619.84 631.24 780.11 876.75 True False 695.21107404723 615.9930403082132 415.4265648707088 346.54576249560654 339.335321041955 444.43984943373397 586.9912280932923 707.7042181803881 488.26514788314455 603.8826091900751 659.028777930988 1.054902452408582 0.9346982422256507 0.6303617972115495 0.5258431408467205 0.5149021293232349 0.67438610318209 0.8906913442173852 1.0738593546737307 0.7408859282534618 0.9163220627268455 1.0 9.364197654813557 -7.769028138180665 23.87030501868453 0.8932604400571338 0.7095948602706968 0.24937349204334114 0.16972226001048746 133.41273062773683 419647.7811272151 0.029976304029750118 0.041878835027653834 1.7020482281725075e-08 7.769028138180665 -0.18366557978643694 SSSSVS(ph)PSSNAPGSCSPDGVDQQLLDDFHR ddPTM_A549_MK2206_60min_R1 1 SSSSVSPSSNAPGSCSPDGVDQQLLDDFHR 30 0 J3KN34;P26045-2;P26045;P26045-3 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 S(0.102)S(0.102)S(0.102)S(0.096)VS(0.385)PS(0.096)S(0.096)NAPGS(0.01)CS(0.01)PDGVDQQLLDDFHR 44.641000000000005 0.0098585 2118200.0 464.88 712.82 495.38 507.42 972.99 668.35 657.0 896.4 891.55 959.71 923.35 True False 543.3403787752203 749.099493299612 565.632332973234 631.7379227789496 829.8644599120594 739.0743533851754 776.3683956542518 1023.4674451098659 689.6153485127966 742.9108444524577 694.0567118364163 0.7828472364132707 1.0793058845545302 0.8149655832541666 0.9102108113145735 1.1956724079741368 1.064861618339006 1.1185950404543248 1.4746164508687716 0.993600863952647 1.0703892517468456 1.0 9.438909740967842 -6.640009822183645 11.444661360365405 1.0596732104438018 0.9030368845790456 0.28906253540481164 0.1524019411610832 0.5333387378332676 50.85633090462215 0.023075771744791772 0.04804673033955442 2.2908158421432285e-07 6.640009822183645 -0.15663632586475618 SSSSVS(ph)PSSNAPGSCSPDGVDQQLLDDFHR ddPTM_A549_PD325901_60min_R1 1 SSSSVSPSSNAPGSCSPDGVDQQLLDDFHR 30 0 J3KN34;P26045-2;P26045;P26045-3 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 S(0.056)S(0.056)S(0.056)S(0.052)VS(0.255)PS(0.255)S(0.255)NAPGS(0.006)CS(0.006)PDGVDQQLLDDFHR 65.377 0.00022468 2413300.0 889.86 747.75 1038.6 912.34 776.29 1005.4 636.63 862.14 720.65 502.49 1069.1 True False 980.1979321196912 810.7655167288531 1109.0856416091601 968.6931697255254 721.7660684551138 997.2123557393078 660.857303027303 844.9439413642543 690.3635866278813 470.7626956445203 937.6074775832792 1.0454246105696496 0.8647174175899638 1.18288907472013 1.0331542707214438 0.7697955548685412 1.0635712487166404 0.7048336524903674 0.901170224817459 0.7363034138841567 0.5020893144516403 1.0 9.872840265325518 -6.736631917844947 24.70229493362335 0.8700220923581122 1.0304403028960274 0.25083296207837735 0.16427530786528383 224.69612647744415 223742.14609785983 0.018802788856358905 0.039126839704657086 1.8338680413066354e-07 6.736631917844947 0.16041821053791516 SSSSWIES(ph)LRR ddPTM_A549_PD325901_60min_R1 1 SSSSWIESLRR 11 1 A0A5K1VW70;P98198;P98198-3 A0A5K1VW70 ATP8B2 Phospholipid-transporting ATPase ID 1 SSSSWIES(1)LRR 69.03 0.0015819 3412400.0 757.82 685.34 546.7 452.97 402.21 629.98 578.84 345.71 544.04 872.13 756.3 True False 834.7533285224022 743.0960070009396 583.8023495741652 480.9489281304898 373.9601571491729 624.849651749203 600.8680729534017 338.8145428457517 521.1758907500623 817.0635629613633 663.2798945807077 1.2585234911275147 1.1203354919580182 0.8801749523000629 0.7251070506735645 0.5638044514911337 0.9420602928786219 0.905904246250733 0.510816844614193 0.7857555988177866 1.2318533542734171 1.0 9.373473985168609 -5.6718885721338275 2.862105639344205 0.8382064997917901 1.2388290157634179 0.34882872518619323 0.18963553946325554 0.20105467349618075 3.138653923332141 0.023435428915050845 0.1223293171304962 2.1286851372325095e-06 5.6718885721338275 0.4006225159716278 SSSTALTTNVTEQTEKDGDKDVFASEVT(ph)PSDLQK ddPTM_A549_PD325901_60min_R1 1 SSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQK 34 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SSSTALT(0.001)T(0.001)NVT(0.001)EQT(0.001)EKDGDKDVFAS(0.141)EVT(0.805)PS(0.05)DLQK 46.981 0.0030199000000000003 4378600.0 1028.3 1138.2 1021.9 1269.6 1794.5 1219.7 1292.3 1344.4 1160.1 1046.7 1165.1 True False 1132.6922590055492 1234.1201085132468 1091.2522791839021 1348.020308529195 1668.4605106889214 1209.7671675902457 1341.4791836736945 1317.5848873386037 1111.3450313564208 980.6111833690605 1021.8000861774196 1.1085262903460695 1.2077901785369014 1.0679704317370973 1.3192603198656732 1.6328639361645338 1.1839568071637336 1.312858749789504 1.2894742378303399 1.08763450540897 0.9596898616808227 1.0 9.996897247187547 -8.880859124125735 3.090639948282457 1.0357295868352643 1.2702497995901652 0.37874588908848306 0.1423419031741597 0.20791168309806587 3.773597158043178 0.02657117283114177 0.02786819076627028 1.3156515323002593e-09 8.880859124125735 0.23452021275490087 SSSTEPPPPVRQEPS(ph)PKPNNK ddPTM_A549_MK2206_60min_R1 2 SSSTEPPPPVRQEPSPKPNNK 21 2 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 S(0.001)S(0.001)S(0.001)T(0.001)EPPPPVRQEPS(0.997)PKPNNK;SSSTEPPPPVRQEPS(1)PKPNNK 62.1 0.00037160000000000003 44733000.0 5244.1 5771.200000000001 4934.1 5089.5 8011.3 5873.799999999999 4811.9 5295.5 8462.1 7825.2 8168.9 True False 6129.175874064558 6064.929429211754 5633.829573505657 6336.42772847634 6832.848382504939 6495.361617287119 5686.159943757522 6046.153341788598 6545.447861196939 6057.481885162569 6140.336679829431 0.998182378858551 0.9877193622191134 0.9175115091021615 1.0319349017605264 1.1127807380579569 1.057818480641936 0.926033903391023 0.9846615351972118 1.0659754020814964 0.9865064736695898 1.0 12.584102046609928 -6.303710498548144 24.594918125475886 1.0287239461046171 0.9697958827571695 0.16493505833927602 0.050690540773241984 469.19682702717006 272995.4918875529 0.007455781325776638 0.017325774767810283 4.969234611065217e-07 6.303710498548144 -0.0589280633474476 SSSTEPPPPVRQEPS(ph)PKPNNK ddPTM_A549_PD325901_60min_R1 2 SSSTEPPPPVRQEPSPKPNNK 21 2 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 SSSTEPPPPVRQEPS(1)PKPNNK;SSSTEPPPPVRQEPS(1)PKPNNK 124.19 7.6445e-16 55801600.0 3540.7799999999997 3250.91 4063.77 4070.79 4549.6 4780.56 4522.68 5636.8 5028.85 5198.790000000001 5382.610000000001 True False 3900.237379015529 3524.8755947696386 4339.561869634179 4322.233452865125 4230.051791267941 4741.628704349617 4694.79306230546 5524.369602015946 4817.504922796946 4870.537512168947 4720.583093176073 0.826219410193963 0.7467034315877393 0.9192851357509867 0.9156143144928877 0.8960867138177847 1.004458265167277 0.9945366853285785 1.170272716945032 1.0205317495122541 1.0317660797475725 1.0 12.204749359011208 -6.467928784660615 0.8085005034203756 1.0226968940576264 0.7815298890614077 0.7021839064263233 0.059051090267185705 0.36212309846839763 0.3862301739131446 0.010002556864793583 0.05407885294617791 3.404640142014152e-07 6.467928784660615 -0.24116700499621868 SSSTGSSSSTGGGGQESQPS(ph)PLALLAATCSR ddPTM_A549_PD325901_60min_R1 1 SSSTGSSSSTGGGGQESQPSPLALLAATCSR 31 0 P08047;H3BVI2;P08047-2 P08047 SP1 Transcription factor Sp1 1 SSSTGSSSSTGGGGQES(0.039)QPS(0.961)PLALLAATCSR 73.548 5.5865e-06 2876000.0 1435.9 1127.6 1460.5 1140.8 1360.9 1534.4 1744.7 1982.1 1857.3 1435.8 1279.1 True False 1581.6715109462893 1222.626809312544 1559.6183126999606 1211.264625055219 1265.3150788501268 1521.9043551286993 1811.0955132364734 1942.5654605726297 1779.2441399347313 1345.1433429648387 1121.7788088829607 1.4099673647082693 1.0899000762280449 1.3903082322022018 1.079771355514699 1.1279541642528406 1.3566884514819582 1.6144854038024814 1.7316831492894647 1.5860917730354152 1.1991163786596208 1.0 10.131572519622532 -7.290353763074614 20.68796026332823 1.3542582414878435 1.2140935457532862 0.13500930975481362 0.21821444691484976 225.77596541217264 161539.8390033837 0.043124046701501134 0.06896008537877484 5.1244379280978084e-08 7.290353763074614 -0.14016469573455725 SSSVGSSSSYPIS(ph)PAVSR ddPTM_A549_MK2206_60min_R1 2 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR 305.43 4.207499999999999e-152 137893000.0 7157.8 7971.9 7068.299999999999 6244.0 7725.099999999999 5155.9 4461.700000000001 5429.6 7860.9 7602.9 7188.799999999999 True False 8365.861648591619 8377.635659262052 8070.691225230549 7773.780280303809 6588.748023378089 5701.493915790569 5272.333136819751 6199.262427452621 6080.41870127782 5885.399609556627 5403.622559213334 1.548195040811572 1.5503739514481705 1.493570495864813 1.438623848190375 1.2193205486093919 1.0551243824514271 0.9757034432077921 1.147241939924671 1.1252485965938774 1.0891581610417718 1.0 12.399711191196822 -6.820060314717522 1.8396311794780704 1.059997619800891 1.5343283139880795 0.9480516510343766 0.04867318082489051 0.06279161142271188 0.4311838039002922 0.009059698525713774 0.020857334131831946 1.5133510599947692e-07 6.820060314717522 0.47433069418718854 SSSVGSSSSYPIS(ph)PAVSR ddPTM_A549_PD325901_60min_R1 3 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGS(0.002)S(0.002)S(0.002)S(0.002)Y(0.003)PIS(0.986)PAVS(0.004)R 309.33 2.5462999999999993e-152 184170000.0 12019.1 10636.4 10958.4 12063.0 12991.3 11980.5 11491.9 12753.400000000001 13187.900000000001 12537.3 12240.6 True False 13239.270184006236 11532.766756449042 11702.102922212425 12808.104112939263 12078.835905551954 11882.93478012212 11929.230543108975 12499.023432151249 12633.658425157615 11745.692738370997 10735.083799556534 1.233271246988603 1.074306169545268 1.0900802584043021 1.1931070452815995 1.125173881367459 1.1069251998398935 1.1112377663602189 1.1643154041021628 1.1768569916221343 1.0941407591858958 1.0 13.390045832668145 -10.839433479603409 1.0318069342593739 0.9981918782978311 1.1403294347970971 0.27062321772741504 0.0524418048920069 0.31276272444359093 0.578824867406004 0.03294291222875109 0.007679663391445858 1.4473265214911304e-11 10.839433479603409 0.14213755649926607 SSSVGSSSSYPISPAVSR ddPTM_A549_MK2206_60min_R1 1 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 204.35 1.379e-48 5026000.0 1866.0 2494.5 2075.7 2245.5 2106.1 2537.1 2548.4 2246.1 3473.5 3620.7 3903.0 False True 2180.935180680092 2621.459395129039 2370.0654720669822 2795.647600804324 1796.2954799338002 2805.57423800932 3011.411292976097 2564.4915533927606 2686.7577960397043 2802.781355314641 2933.7773826799526 0.7433880953461599 0.8935440741363897 0.807854572081393 0.9529174290145187 0.6122807717240347 0.9563009976736814 1.0264620999379397 0.8741261584920066 0.9158015232857919 0.9553490226836335 1.0 11.518543686999697 -7.440725566350177 24.99995076373503 0.9574628342610028 0.8126423431283831 0.4214183737902387 0.0886471440796485 72.65168410924872 22107.838488327612 0.01256227658353558 0.02008218559352706 3.6247197458009727e-08 7.440725566350177 -0.14482049113261963 SSSVLS(ph)LEGSEK ddPTM_A549_MK2206_60min_R1 2 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SS(0.001)S(0.06)VLS(0.93)LEGS(0.009)EK;SSS(0.009)VLS(0.991)LEGSEK 167.73 1.474e-15 41930000.0 7983.9 9682.8 8452.2 8152.9 12612.2 8869.599999999999 8567.1 8932.7 13562.8 13363.1 14774.4 True False 9331.38713238574 10175.6131614173 9650.849054778884 10150.360865997589 10756.96208728032 9808.17518483602 10123.631175661398 10198.937580246433 10490.847455341094 10344.366428923979 11105.508727303784 0.8402485074316115 0.9162671797645557 0.8690145847214993 0.9139933266669822 0.9686149776131792 0.8831810793792665 0.9115864409499439 0.9183674364391364 0.9446525785485633 0.9314626356099764 1.0 13.43898786172275 SSSVLS(ph)LEGSEK ddPTM_A549_PD325901_60min_R1 1 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SSS(0.003)VLS(0.996)LEGS(0.002)EK 142.77 9.9261e-12 44462000.0 6631.3 6263.8 6417.5 6587.4 6361.3 6719.9 6746.4 6692.5 7333.1 6460.1 7623.3 True False 7304.504694294958 6791.672408808009 6853.030141562476 6994.288736929134 5914.504233293639 6665.175362375746 7003.137943771733 6559.012837335317 7024.915308542174 6052.208183512439 6685.682428080273 1.0925593270203195 1.0158532777869573 1.0250307601777993 1.0461592832397626 0.8846522844777014 0.9969326892317834 1.047482888860848 0.9810536034118319 1.0507402025314727 0.9052491273131366 1.0 12.706859112797945 -5.259400110461545 5.458539606174526 1.013752240534917 1.0955977254870863 0.133831452227948 0.055321105038179524 0.1947598003749547 21.72108574589806 0.006171495822826469 0.059124995020654394 5.503004773561048e-06 5.259400110461545 0.08184548495216926 SSSVLSLEGS(ph)EK ddPTM_A549_PD325901_60min_R1 1 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SSSVLSLEGS(1)EK 89.26 0.00027557 2930300.0 3736.6 3980.1 3911.6 4093.4 5154.8 4314.2 3948.6 4569.8 4679.2 5170.5 4639.9 True False 4115.936881260469 4315.516995162163 4177.064698361634 4346.240021214092 4792.7446310945925 4279.066585568453 4098.86613375683 4478.651754061254 4482.549496356319 4844.033747596948 4069.221714749472 1.0114801231748252 1.0605263850627649 1.0265021154343275 1.0680764838790984 1.1778037588177142 1.051568797556144 1.0072850341135031 1.100616301595891 1.101574161002012 1.1904079175728026 1.0 11.990537173590619 -4.3332844982836205 1.3316706292487472 1.0590025323932615 0.6469840409488415 0.006480969224174515 0.06201197023021066 35.368537248825 8.038836021958229 0.007935226568898307 35.318399415825226 4.642110795036764e-05 4.3332844982836205 -0.41201849144441993 SSSVNPVLEETHEGEAPGCEEQKPTSEILSTS(ph)GK ddPTM_A549_MK2206_60min_R1 1 SSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGK 34 1 A0A2R8YFC5;A0A2R8YHG5;Q9BZV2 A0A2R8YFC5 SLC19A3 Thiamine transporter 2 1 SSSVNPVLEETHEGEAPGCEEQKPT(0.067)S(0.067)EILS(0.263)T(0.288)S(0.315)GK 46.05 0.0053897 5069300.0 610.39 1052.2 890.4 684.34 1287.1 683.48 945.48 819.26 1369.6 1215.9 1460.9 True False 713.4089093972781 1105.7524856904286 1016.6721088444572 852.0033307211896 1097.7692950110597 755.8053999426947 1117.2614775086477 935.3926138785242 1059.387786801779 941.2273455207747 1098.1182112111553 0.649664946918996 1.0069521426758354 0.9258312069363933 0.775875786434216 0.9996822598910269 0.6882732589500441 1.0174327919362876 0.851814134697616 0.9647301865919706 0.8571275258996572 1.0 10.100817651890821 -8.73485155226067 0.8614753697854044 0.9922925968219494 0.861929936140532 0.030714190707784583 0.12406612126348364 0.6151861514079614 0.9254122473210473 0.025287818607130936 0.026559251435434056 1.8414013098315284e-09 8.73485155226067 -0.13036266068141733 SSSVS(ph)PSASFR ddPTM_A549_MK2206_60min_R1 2 SSSVSPSASFR 11 0 H7C4P7;H7C4W5;Q5JSY7;Q04727-2;Q04727-4;Q04727;Q04727-3 H7C4P7;Q04727-4 TLE4 Transducin-like enhancer protein 4 1 SSS(0.035)VS(0.912)PS(0.053)ASFR;SSS(0.001)VS(0.977)PS(0.021)ASFR 198.74 6.003400000000001e-24 137474000.0 7079.1 8035.1 7133.1 6347.700000000001 9168.6 6331.5 6129.4 7519.099999999999 10275.2 9428.8 10435.2 True False 8273.879012621883 8444.052269313028 8144.6808396208435 7902.886784959078 7819.911085570981 7001.4951274904515 7243.032639761295 8584.955451277994 7947.8836061226875 7298.827531414005 7843.851843131393 1.0548234691438048 1.0765185827301431 1.038352202783238 1.0075262693646336 0.9969478314941178 0.8926093031220922 0.9234025303657136 1.0944821017744695 1.0132628414039195 0.9305157309677325 1.0 12.937346570421848 -6.133768162833671 2.4481276772827414 0.9977352521435411 1.0654347384738814 0.2550348002338192 0.05311340370974286 0.34981354800816344 4.033330376010108 0.007297372075895646 0.024228319861871624 7.349060745536626e-07 6.133768162833671 0.06769948633034029 SSSVS(ph)PSASFR ddPTM_A549_PD325901_60min_R1 1 SSSVSPSASFR 11 0 H7C4P7;H7C4W5;Q5JSY7;Q04727-2;Q04727-4;Q04727;Q04727-3 H7C4P7;Q04727-4 TLE4 Transducin-like enhancer protein 4 1 SSS(0.136)VS(0.864)PSASFR 220.29 6.222699999999999e-32 93599000.0 7316.3 8096.0 6497.2 9230.9 8230.3 8380.4 6548.0 9083.6 8067.5 9039.7 9087.3 True False 8059.045390024609 8778.278332914473 6938.1390628375075 9801.071728105037 7652.232120993602 8312.152800912769 6797.187723203084 8902.420472053656 7728.451030486965 8468.931799275146 7969.6197091409 1.0112208215884053 1.1014676550809654 0.8705734170577403 1.2298041921452687 0.9601753157953993 1.042979854029797 0.8528873360678585 1.1170445763984025 0.9697389979126202 1.0626519342650127 1.0 12.960295168623595 SSSVS(ph)PSSWK ddPTM_A549_PD325901_60min_R1 1 SSSVSPSSWK 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 SSS(0.012)VS(0.482)PS(0.422)S(0.084)WK 110.66 0.00018105 6597700.0 4810.2 3985.8 3776.5 3759.0 4070.5 4365.3 3748.6 3538.3 5649.3 5005.8 5727.6 True False 5298.527962917919 4321.697354166319 4032.795999939337 3991.1848926915923 3784.6021224626634 4329.750444110603 3891.2550243126293 3467.725830757346 5411.879566969945 4689.732933704829 5023.141510247865 1.054823550582485 0.8603574765611305 0.8028433982422964 0.7945595170968315 0.7534333075708858 0.861960674465839 0.7746656183931829 0.690350017749397 1.077389429688374 0.9336254859906218 1.0 12.294374203362272 -8.776831846584573 24.98550951499769 1.0365450269947654 0.8208933492086881 0.4102942743384417 0.09357169500285588 127.41387015160325 206821.22062988384 0.015527979363988954 0.016560033240150523 1.671737765063917e-09 8.776831846584573 -0.2156516777860773 SSSVSS(ph)QEEK ddPTM_A549_MK2206_60min_R1 2 SSSVSSQEEK 10 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 SSSVS(0.025)S(0.975)QEEK;SSSVS(0.02)S(0.98)QEEK 134.75 7.256999999999999e-07 8573900.0 3688.6 3741.4 3930.8 3391.7 2760.9 2362.75 1870.95 1975.88 2992.2 6310.5 5892.4 True False 4311.145502388311 3931.821279188529 4488.246546996625 4222.6666522592 2354.775267342114 2612.774636733485 2210.877397030931 2255.967040878719 2314.4714775615375 4884.95366716741 4429.154458033138 0.9733563241555518 0.8877137423052388 1.0133416184789652 0.953379858902994 0.5316534543227023 0.5899037076918161 0.49916466404125337 0.5093448562822372 0.5225537965522495 1.1029088539252883 1.0 12.112815593909003 -6.730921683916214 22.927513767654844 0.6998958404956171 0.9560313460053519 0.32069938691996125 0.19287245704056488 95.6549904878722 71862.8175502173 0.03120990437638829 0.06495798225987755 1.8581395021503626e-07 6.730921683916214 0.25613550550973474 SSSVSS(ph)QEEK ddPTM_A549_PD325901_60min_R1 2 SSSVSSQEEK 10 0 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 SSSVS(0.019)S(0.981)QEEK;SSSVS(0.042)S(0.958)QEEK 216.91 1.2092000000000001e-26 24740000.0 7396.5 8116.8 6524.1 7938.0 8673.8 8622.1 7010.5 8812.9 8117.200000000001 8083.3 8225.3 True False 8147.387234984488 8800.831221912073 6966.864658600352 8428.312231493983 8064.582210985541 8551.88447624814 7277.288413792794 8637.119795913695 7776.062312323375 7572.919058495392 7213.640244472685 1.1294418572131135 1.2200263561321267 0.9657904223791283 1.1683854400629443 1.1179629060604837 1.1855157987398748 1.0088233079503623 1.1973316527022158 1.077966470296552 1.049805479875157 1.0 12.816511760122324 -9.786881010801514 0.6328647316264407 1.002181367437587 1.124436389426253 0.1846420265049914 0.07522793301371955 0.645544997765493 0.5427173709768469 0.035490909630879995 0.016348570185759154 1.6334994372649105e-10 9.786881010801514 0.122255021988666 SSSVTS(ph)IDKESR ddPTM_A549_PD325901_60min_R1 1 SSSVTSIDKESR 12 1 H0Y332;Q5JRH0;Q5T5C0-2;Q5T5C0;Q5T5C0-3 H0Y332 STXBP5 Syntaxin-binding protein 5 1 S(0.012)S(0.011)S(0.009)VT(0.191)S(0.777)IDKESR 60.918 0.0025541 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SST(ph)DFSELEQPR ddPTM_A549_MK2206_60min_R1 2 SSTDFSELEQPR 12 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.005)S(0.34)T(0.654)DFSELEQPR;S(0.002)S(0.002)T(0.996)DFSELEQPR 327.81 4.6623999999999985e-151 37080000.0 6332.2 7885.4 6790.8 7475.6 8887.8 8605.6 6729.299999999999 8156.0 10212.4 11608.1 10088.5 True False 7400.92055257367 8286.73317873342 7753.837552494319 9307.12233559243 7580.416393597469 9516.238880065039 7951.926704529918 9312.137976702443 7899.307705851695 8985.822147824414 7583.247021564612 0.9759566754884211 1.0927684612103883 1.0224957106691364 1.227326804616229 0.9996267261294413 1.254902926543675 1.048617654405413 1.2279882153675534 1.04167880637256 1.1849570668436984 1.0 12.888600003620592 -8.97930993680719 22.042283928049404 1.0183873576593656 1.1082642315819116 0.0 0.10381700143474137 45.28857123287677 48250.30060294387 0.01464869391752243 0.014998157911756023 1.0487936837400735e-09 8.97930993680719 0.08987687392254595 SST(ph)DFSELEQPR ddPTM_A549_PD325901_60min_R1 2 SSTDFSELEQPR 12 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 S(0.051)S(0.074)T(0.872)DFS(0.003)ELEQPR;SS(0.001)T(0.999)DFSELEQPR 274.8 2.2458999999999994e-78 30633000.0 7173.9 7667.0 7687.5 7609.1 8440.0 8153.4 8128.3 8284.1 8371.5 8192.7 8765.9 True False 7902.189046853949 8313.124997338844 8209.219978692872 8079.0968254800755 7847.203516419331 8087.001413651153 8437.626904476432 8118.8671267492755 8019.674967675448 7675.411523825073 7687.74987161844 1.0278936202161275 1.0813469657785248 1.0678313051000254 1.0509052662218377 1.0207412633688253 1.0519334719131102 1.0975418094215552 1.0560784705967645 1.0431758448960997 0.9983950638353991 1.0 12.908345682058084 -10.014525556540075 0.7167943607794406 1.0019265828309112 1.0573362675256686 0.5159805750765445 0.020860999632244394 0.4071253067514105 0.41893983096268267 0.011101426121291596 0.004588939575120702 9.67106814503253e-11 10.014525556540075 0.05540968469475738 SST(ph)IPRNSNIAQNYRR ddPTM_A549_PD325901_60min_R1 1 SSTIPRNSNIAQNYRR 16 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 S(0.111)S(0.139)T(0.743)IPRNS(0.006)NIAQNYRR 46.663000000000004 0.051733 37656000.0 5979.7 6637.4 6224.4 7147.9 6997.4 7733.0 7067.0 7019.1 7313.5 7073.2 9468.3 True False 6586.754741977518 7196.756991957327 6646.825214357845 7589.409548941275 6505.926763719507 7670.02501186798 7335.938552210786 6879.098544122571 7006.139028381334 6626.5969448801325 8303.759124498898 0.7932256515659714 0.8666866275930933 0.8004597814919103 0.9139727483845178 0.7834917494806446 0.923681057804147 0.8834478989843632 0.828431851283704 0.8437310046375086 0.7980237438884071 1.0 13.019548879257309 -10.782177049273072 0.6186046485430042 1.0237984973240974 0.8476218444459298 0.0 0.07472703674619546 0.5656592437794068 0.302122132091772 0.05602522222335338 0.008656769914061571 1.651288478538637e-11 10.782177049273072 -0.17617665287816764 SST(ph)LSQLPGDK ddPTM_A549_MK2206_60min_R1 1 SSTLSQLPGDK 11 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.228)S(0.228)T(0.54)LS(0.004)QLPGDK 50.94 0.027072000000000002 5111400.0 3829.4 4079.3 3881.3 3719.7 5490.2 4397.0 3612.6 3525.8 6248.8 5932.5 5642.4 True False 4475.709100158811 4286.9189459009385 4431.726702670702 4631.02666698368 4682.598852823962 4862.287621507619 4268.962657748173 4025.592947309648 4833.456777283117 4592.344129699813 4241.23635768213 1.0552840546252469 1.0107710545619708 1.04491387155152 1.0919048778301461 1.10406458351287 1.1464316561138082 1.006537315473075 0.9491555310323868 1.1396339108826843 1.0827842974093445 1.0 12.05026916904756 -6.007773466678519 22.57212601573753 1.064667244760207 1.0317312711784117 0.04682850149014228 0.057860056937914565 306.4455697594903 889880.5267287522 0.00937156413644535 0.027397179672861323 9.822601683524905e-07 6.007773466678519 -0.03293597358179534 SST(ph)PEEVKK ddPTM_A549_MK2206_60min_R1 2 SSTPEEVKK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 S(0.001)S(0.008)T(0.991)PEEVKK;SS(0.011)T(0.988)PEEVKK 115.0 0.00013000000000000002 56105000.0 11925.1 12836.9 11475.8 10298.3 16758.3 12644.3 12066.6 11970.8 16792.6 16324.4 16582.1 True False 13937.765339296973 13490.243379166961 13103.241000311353 12821.383962308246 14293.176269585776 13982.311433392955 14258.945027399694 13667.69755903747 12989.102912271872 12636.706702211812 12464.306927321863 1.118214227278476 1.0823099477433629 1.0512610991301041 1.028647965512119 1.1467285227271655 1.121788119862775 1.1439821813232125 1.0965469350788983 1.0421039042130495 1.0138314770243702 1.0 13.60551504414264 -9.003141816994146 1.8836054051247753 1.0149579213349926 1.0981997097956344 0.5178750593686245 0.03478113257347782 0.19731198311188386 1.4112781175275761 0.007607880478017385 0.007541351245557694 9.92791803592301e-10 9.003141816994146 0.08324178846064179 SST(ph)PEEVKK ddPTM_A549_PD325901_60min_R1 4 SSTPEEVKK 9 1 P23528;E9PP50;G3V1A4;E9PK25;E9PS23;E9PQB7;E9PLJ3 P23528 CFL1 Cofilin-1 1 S(0.011)S(0.119)T(0.871)PEEVKK;S(0.005)S(0.017)T(0.978)PEEVKK;S(0.259)S(0.229)T(0.512)PEEVKK;S(0.077)S(0.084)T(0.839)PEEVKK 103.21 0.00040771 102206000.0 27738.499999999996 25970.899999999998 28525.5 25570.7 29431.7 30334.299999999996 30770.0 29948.1 30381.899999999998 29267.0 32474.0 True False 30554.492099995572 28159.55888788146 30461.411967766315 27150.144063726777 27364.518925852943 30087.267518105105 31940.969187990057 29350.76165167003 29105.054398903252 27419.076625262518 28479.90386964684 1.0728439337381253 0.9887518938535885 1.0695756596366646 0.9533088379790042 0.9608360706237268 1.056438520853694 1.1215265800820322 1.0305779747715835 1.0219505842476766 0.9627517266476827 1.0 14.797656656225325 -5.239265927578766 22.78789997038095 1.0176628257407478 1.0728441312656567 0.09694272816381033 0.04927208817478179 3059.87233707998 3144498.4039979214 0.006366339214471156 0.3701805523129581 5.764134053480285e-06 5.239265927578766 0.05518130552490885 SST(ph)PKGDMSAVNDESF ddPTM_A549_PD325901_60min_R1 4 SSTPKGDMSAVNDESF 16 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 S(0.03)S(0.03)T(0.939)PKGDMS(0.001)AVNDES(0.001)F;S(0.059)S(0.059)T(0.839)PKGDMS(0.021)AVNDES(0.022)F;S(0.236)S(0.236)T(0.463)PKGDMS(0.052)AVNDES(0.012)F;S(0.274)S(0.274)T(0.401)PKGDMS(0.023)AVNDES(0.029)F 86.539 1.0236e-05 34955500.0 11133.199999999999 13080.8 12473.5 12807.3 14459.7 14913.399999999998 12426.099999999999 12124.6 14443.5 14955.5 14807.0 True False 12263.434268171335 14183.164923071598 13320.026719248846 13598.377833511322 13444.100555256951 14791.950214922002 12898.982035322828 11882.765341435304 13836.48992362423 14011.207177678405 12985.83286930654 0.9443702526895542 1.0922029465353036 1.0257352649849831 1.0471702485600751 1.0352898185709427 1.139083674015582 0.9933118780398758 0.9150560815796068 1.0655065457009165 1.0789609968564629 1.0 13.664650926325479 -11.198813491733324 1.6210204941723443 0.9999348849956896 1.0355057182906084 0.0 0.06442085599078659 1.157553295644618 5.455671659105607 0.04348526956265924 0.009006928897588895 6.326834997016246e-12 11.198813491733324 0.035570833294918835 SST(ph)PLHS(ph)PSPIR ddPTM_A549_MK2206_60min_R1 1 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 S(0.193)S(0.221)T(0.65)PLHS(0.5)PS(0.436)PIR 46.206 0.026957 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SST(ph)PLHS(ph)PSPIR ddPTM_A549_PD325901_60min_R1 1 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 S(0.044)S(0.055)T(0.901)PLHS(0.843)PS(0.156)PIR 69.209 0.00041309 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SST(ph)PLHSPSPIR ddPTM_A549_MK2206_60min_R1 2 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.182)S(0.182)T(0.626)PLHS(0.006)PS(0.005)PIR;S(0.089)S(0.089)T(0.363)PLHS(0.109)PS(0.35)PIR 55.335 0.016644 11093700.0 2935.5 3568.0 2811.7 3069.0 4865.4 3433.8 4147.5 4073.1 6133.4 5126.1 5532.200000000001 True False 3430.940633915545 3749.5959598398126 3210.4413392160395 3820.9051377726464 4149.706105156406 3797.1624368280322 4901.047063890424 4650.474398345603 4744.19469302718 3968.1104497689316 4158.402059047408 0.8250622679572 0.9016915407883278 0.772037261820584 0.9188397570791713 0.9979088232047975 0.9131301838807458 1.1785890335513007 1.1183320737896414 1.1408696479228762 0.954239247052973 1.0 12.02181353794054 -7.010775660520502 1.2093045592146543 1.0770501010717872 0.8403023131011513 0.5967950625763583 0.07826635677892417 0.2251409268379314 0.6490644055680046 0.012564735938588792 0.030571268350133712 9.754934091904499e-08 7.010775660520502 -0.2367477879706359 SST(ph)PLPTISSSAENTR ddPTM_A549_MK2206_60min_R1 4 SSTPLPTISSSAENTR 16 0 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 S(0.003)S(0.006)T(0.99)PLPTISSSAENTR;S(0.058)S(0.005)T(0.937)PLPTISSSAENTR;SS(0.002)T(0.998)PLPTISSSAENTR;SS(0.004)T(0.996)PLPTISSSAENTR 280.5 6.010299999999999e-107 2774313600.0 18794.009999999995 20786.5 19126.7 18212.3 25930.5 21954.7 19284.47 20538.3 31157.399999999998 27628.5 30545.9 True False 21965.979418570965 21844.44406368 21839.153666032442 22674.314317581207 22116.15779992564 24277.931781649604 22788.208576777077 23449.66692090581 24100.29864814378 21387.202661173396 22960.51000604753 0.9566851700064756 0.9513919358902058 0.9511615229923144 0.9875353078659428 0.9632258949866751 1.0573777226749355 0.9924957490393257 1.0213042704508497 1.0496412597889178 0.9314776830105367 1.0 14.486867067513565 -7.237272171699042 23.433159932921015 1.0233515800863935 0.962227106030442 0.2686571783304862 0.03398311471535413 179.8699128913562 174406.26073697562 0.00340923399804327 0.00590222744238354 5.790656830955775e-08 7.237272171699042 -0.06112447405595145 SST(ph)PLPTISSSAENTR ddPTM_A549_PD325901_60min_R1 4 SSTPLPTISSSAENTR 16 0 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 S(0.034)S(0.006)T(0.96)PLPTISSSAENTR;S(0.057)S(0.011)T(0.932)PLPTISSSAENTR;S(0.029)S(0.029)T(0.942)PLPTISSSAENTR;SS(0.016)T(0.984)PLPTISSSAENTR 297.67 1.6083999999999996e-124 3035678400.0 53922.6 59920.299999999996 55294.600000000006 62815.5 65485.5 62176.5 57519.3 60377.0 64476.799999999996 61080.9 66551.09999999999 True False 59396.782656279924 64969.993971311145 59047.22406944146 66695.4707706489 60886.02439271065 61670.15519855288 59708.22843726871 59172.73337015978 61767.06432011179 57224.24154986839 58365.7366021818 1.0176652624317188 1.113152985871551 1.0116761563707255 1.1427161662542218 1.0431809472003586 1.0566157267729497 1.0230013688379755 1.0138265498725465 1.0582761036858541 0.9804423773472819 1.0 15.83283406816484 -7.496793896846069 2.1024245128712913 1.0267090911296919 1.069948177711772 0.24502466310476523 0.0405063658020864 0.3811390645889551 3.3547808014010854 0.005903794783418603 0.00982516151851444 3.185709005126787e-08 7.496793896846069 0.0432390865820802 SST(ph)PLSEAK ddPTM_A549_MK2206_60min_R1 2 SSTPLSEAK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.003)S(0.002)T(0.995)PLSEAK;S(0.003)S(0.004)T(0.993)PLSEAK 153.33 1.8203e-05 75642000.0 10382.900000000001 10869.400000000001 10757.599999999999 9764.5 14017.1 11646.6 10728.0 11704.3 16206.599999999999 15987.199999999999 17094.5 True False 12135.279682466948 11422.606033038915 12283.189440818885 12156.802938345056 11955.203158340084 12879.03548161261 12677.138734518741 13363.420367915449 12535.830976622152 12375.680416407387 12849.463865801297 0.9444191453594307 0.8889558469003561 0.955930112657109 0.9460941767928738 0.9304048233606634 1.0023013890789652 0.9865889244032043 1.039998283779142 0.9755917528968756 0.9631281542683754 1.0 13.649420544860751 -7.257489298052221 24.852677156937776 0.9932063451647711 0.9326884669664367 0.6181294818451246 0.024030991763323684 157.25847068241862 989419.4823392426 0.003340123242141533 0.005652452894727909 5.5272702815642534e-08 7.257489298052221 -0.06051787819833443 SST(ph)PLSEAK ddPTM_A549_PD325901_60min_R1 2 SSTPLSEAK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.005)S(0.001)T(0.994)PLSEAK;S(0.001)S(0.005)T(0.994)PLSEAK 161.51 7.583300000000001e-06 133673000.0 32081.0 29836.0 28859.0 27121.0 31961.0 30148.0 31118.0 31550.0 31566.0 30861.0 37912.0 True False 35337.83950321601 32350.384429451107 30817.545283264713 28796.20257374002 29716.16961946426 29902.48468353756 32302.212518422974 30920.710499503788 30239.390793721926 28912.431193228807 33249.06434396903 1.0628220733563547 0.9729712720568351 0.9268695493037125 0.8660755766188439 0.8937445370505412 0.8993481553101659 0.9715224520079524 0.9299723498869652 0.9094809550394755 0.8695712725664463 1.0 15.021026122108875 -10.899555585475916 1.1118926054649603 1.0005802086596594 0.9321808344401811 0.0 0.06321205804846762 0.7081276450367137 1.5330472906477903 0.037926401340772124 0.008740503413186657 1.2602143323762413e-11 10.899555585475916 -0.06839937421947828 SST(ph)PPGESYFGVSSLQLK ddPTM_A549_MK2206_60min_R1 4 SSTPPGESYFGVSSLQLK 18 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.077)S(0.077)T(0.846)PPGESYFGVSSLQLK;SST(0.999)PPGESYFGVSSLQLK;S(0.011)S(0.011)T(0.977)PPGESYFGVSSLQLK;S(0.029)S(0.267)T(0.704)PPGESYFGVSSLQLK 225.86 4.898799999999999e-64 224244900.0 15179.13 16527.600000000002 16177.12 14330.3 22612.2 15983.2 15945.54 16823.5 24102.399999999998 23778.9 23524.699999999997 True False 17740.996049901703 17368.784244912706 18471.278869530386 17841.224143311618 19285.975334200208 17674.531615210508 18842.63821558707 19208.282644807936 18643.244883623818 18407.22997483671 17682.867741309517 1.003287267056598 0.9822379774032313 1.044586157616224 1.0089553574860575 1.0906588012953136 0.9995285761211947 1.0655872390861227 1.0862651310757048 1.0543111647026988 1.0409640700888685 1.0 14.110064644135337 -5.762415999298277 24.99997248808034 1.0352556652053029 0.9927626149404818 0.2551652083112189 0.030905816816580337 29.97547718423041 767434.3833047891 0.00466952343746098 0.01584685717311297 1.7281602067944854e-06 5.762415999298277 -0.042493050264821086 SST(ph)PPGESYFGVSSLQLK ddPTM_A549_PD325901_60min_R1 5 SSTPPGESYFGVSSLQLK 18 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.086)S(0.086)T(0.827)PPGESYFGVSSLQLK;SS(0.001)T(0.999)PPGESYFGVSSLQLK;S(0.019)S(0.163)T(0.818)PPGESYFGVSSLQLK;S(0.117)S(0.117)T(0.766)PPGESYFGVSSLQLK;S(0.092)S(0.092)T(0.816)PPGESYFGVSSLQLK 259.21 3.7697999999999994e-87 416473000.0 25419.499999999996 25151.500000000004 28023.499999999996 26718.300000000003 30466.5 28378.899999999998 30048.5 28472.300000000003 28338.499999999996 30976.600000000002 31408.899999999998 True False 28000.068927153123 27271.105174196924 29925.343228995072 28368.628709338074 28326.638143719156 28147.79164739432 31192.01211067013 27904.397640412742 27147.53139478834 29020.732189500373 27545.80441742164 1.016491241382814 0.9900275468792997 1.0863848002227325 1.0298711295356482 1.0283467389249183 1.021854044298374 1.1323688950228081 1.013018070467541 0.985541427050088 1.053544552547026 1.0 14.749544973949256 -8.515081320439341 24.803477943415423 0.9934937787297241 1.0434965846199236 0.06460105764473223 0.04036329318632327 310.5514217172315 987860.6549481354 0.0058805236006271655 0.006816875065857922 3.054349141246726e-09 8.515081320439341 0.05000280589019945 SST(ph)PPRQS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.235)S(0.163)T(0.602)PPRQS(0.703)PS(0.297)R;S(0.013)S(0.021)T(0.967)PPRQS(0.657)PS(0.343)R 115.92 4.1855e-05 255390000.0 3256.8 3604.3999999999996 3246.6000000000004 2849.4 4299.4 3319.1000000000004 3004.0 3094.2 5270.1 4577.6 4922.3 True False 3806.468218884736 3787.8485643628405 3707.0166987583307 3547.503127914426 3666.963955380742 3670.324958959734 3549.787915594174 3532.81232559008 4076.430764620366 3543.5169807187267 3699.957061431086 1.0287871333870164 1.0237547359259784 1.0019080322311942 0.9587957560086675 0.9910828408269196 0.9919912307144746 0.9594132733586835 0.9548252228158678 1.1017508303308974 0.9577184064260869 1.0 11.853292812803705 -8.749334486564127 24.999642062301884 1.0480490067792048 0.988620687607272 0.0 0.04186414881773527 209.64032251271036 432959.8743559545 0.007251437466359387 0.008192473333949794 1.7810065367408088e-09 8.749334486564127 -0.05942831917193281 SST(ph)PPRQS(ph)PSR ddPTM_A549_PD325901_60min_R1 3 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.036)S(0.009)T(0.956)PPRQS(0.95)PS(0.05)R;S(0.009)S(0.014)T(0.977)PPRQS(0.864)PS(0.136)R;S(0.138)S(0.047)T(0.814)PPRQS(0.943)PS(0.057)R 137.58 1.4698e-08 652660000.0 6971.200000000001 7920.3 7157.0 7279.5 8845.0 7193.2 6693.300000000001 7464.200000000001 7280.0 7699.4 8192.8 True False 7678.911092073803 8587.771477295271 7642.717058537225 7729.138182055985 8223.757713593484 7134.62096409786 6948.017194214294 7315.320675448376 6974.046916881945 7213.258570012175 7185.137538438217 1.0687215172979019 1.1952132344514501 1.0636841699481885 1.075711931846473 1.144551189117672 0.9929692961241021 0.9669984961379787 1.0181183917932983 0.970621213522079 1.0039137777702263 1.0 12.810800057785004 -7.274194621000292 23.25511905575773 0.9873032669675298 1.1099030778043177 0.7063480716976613 0.037645264203769624 112.86426459655165 205771.97078254668 0.005254191451431498 0.008439611359566787 5.31869858261618e-08 7.274194621000292 0.12259981083678795 SST(ph)PPRQS(ph)PSRSS(ph)S(ph)PQPK ddPTM_A549_PD325901_60min_R1 1 SSTPPRQSPSRSSSPQPK 18 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 4 S(0.115)S(0.139)T(0.763)PPRQS(0.868)PS(0.321)RS(0.61)S(0.609)S(0.574)PQPK 55.733999999999995 0.0027839 13295000.0 1977.4 1766.0 2131.7 1944.4 2541.7 2361.8 2184.6 2486.9 2127.0 2055.5 2481.8 True False 2178.144192315059 1914.8270177775385 2276.3699809534423 2064.501171947203 2363.1797603889836 2342.566283852293 2267.7361484589887 2437.2968285646925 2037.609586841745 1925.7153792061763 2176.55433342642 1.0007304475997787 0.8797515358889021 1.0458594788993338 0.9485180958920433 1.0857435185956377 1.0762728262172672 1.0418927355188174 1.1197959964214637 0.9361629781297753 0.8847541040588852 1.0 11.087830319300402 -4.862636293791578 19.250792832653275 0.9945909364565725 3.7086618323148044 0.0 0.07765949197004735 12827.551568696845 1633819.1905186288 0.009893452340394257 140378.8536760864 1.3720303118351168e-05 4.862636293791578 2.714070895858232 SST(ph)PPRQSPSRS(ph)S(ph)S(ph)PQPK ddPTM_A549_PD325901_60min_R1 1 SSTPPRQSPSRSSSPQPK 18 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 4 S(0.233)S(0.133)T(0.621)PPRQS(0.21)PS(0.486)RS(0.793)S(0.773)S(0.752)PQPK 45.395 0.010739 13442000.0 1947.3 2520.2 2887.8 2639.9 3178.8 3090.6 2680.4 2985.4 2726.1 3172.1 3239.2 True False 2144.9884624735078 2732.5860986426674 3083.7834737521002 2802.9606273521 2955.532054264665 3065.4311782851623 2782.404088771161 2925.853854999007 2611.531497268116 2971.8130646460268 2840.7989349806007 0.7550652163589873 0.961907604580726 1.0855338742138605 0.986680399248756 1.040387624013541 1.0790736157137062 0.979444217086121 1.0299404927856983 0.9192947325875949 1.046118761892003 1.0 11.47208100926537 -5.274336998680615 4.5053125682582085 0.9887115086994147 0.741918024425262 0.6451488550959522 0.05253220485957683 0.09943096876070509 5.0373921600110245 0.007969936677718953 0.07578418779239801 5.3169552036828215e-06 5.274336998680615 -0.2467934842741527 SST(ph)PRES(ph)PCGK ddPTM_A549_MK2206_60min_R1 1 SSTPRESPCGK 11 1 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 S(0.16)S(0.191)T(0.649)PRES(1)PCGK 67.456 0.009588600000000001 11934000.0 791.13 996.69 982.37 1063.2 1161.7 994.5 933.58 1239.9 1473.4 1419.3 1620.6 True False 924.6534027285323 1047.4172637928098 1121.6848377869835 1323.6840477288617 990.815468894684 1099.7373299043277 1103.1994015447438 1415.6596220344982 1139.6772525363174 1098.6791442533406 1218.1602937153807 0.7590572500999402 0.8598353346407263 0.9208023308376374 1.0866255077906326 0.8133703536442676 0.902785401541973 0.9056274508669077 1.162129179007096 0.9355724845211539 0.9019167263303064 1.0 10.250488269903506 -8.037735879469283 24.99898286250414 0.9855821146188272 0.8965196947579028 0.21362707412417148 0.09760877671342845 763.1814857639419 505585.06468772184 0.015117984938752141 0.019519647403606726 9.167778682426838e-09 8.037735879469283 -0.08906241986092434 SST(ph)PRES(ph)PCGK ddPTM_A549_PD325901_60min_R1 2 SSTPRESPCGK 11 1 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 S(0.067)S(0.104)T(0.829)PRES(1)PCGK;S(0.004)S(0.005)T(0.992)PRES(1)PCGK 102.9 0.00046141 39122000.0 6983.5 6762.1 6860.4 6586.0 7808.799999999999 6496.1 7461.9 7467.9 5367.7 6810.6 7595.0 True False 7692.459779019021 7331.965898592015 7325.987998936529 6992.802262108763 7260.336826897544 6443.197915375093 7745.866687808355 7318.946876045782 5142.114235679567 6380.57755369573 6660.86314867179 1.1548743169348759 1.1007531208705355 1.0998556546530112 1.0498342491097663 1.0899993987033485 0.9673217676991155 1.1628923331584915 1.0987985659944413 0.771989173310809 0.9579205294088723 1.0 12.70149342586572 -8.739438797137298 24.98963480353509 0.892328220688723 1.0881215365308061 0.552192506190877 0.07191975205313748 143.44741439770007 162936.47386296274 0.015505302409365575 0.01757426077837795 1.8220538275698828e-09 8.739438797137298 0.19579331584208315 SST(ph)PSPSPLNLSSSR ddPTM_A549_MK2206_60min_R1 2 SSTPSPSPLNLSSSR 15 0 P37275-3;P37275-4;P37275-5;P37275;P37275-2 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 SS(0.019)T(0.981)PSPSPLNLSSSR;S(0.001)S(0.031)T(0.964)PS(0.004)PSPLNLSSSR 112.42 9.565e-14 4164300.0 3901.9 3666.3 2956.2 2900.4 3719.9 3298.7 3246.6 3435.5 4827.5 5329.3 6315.9 True False 4560.445327703993 3852.8990099665643 3375.433612046254 3610.998130203903 3172.707637721734 3647.766244500157 3836.465195328907 3922.4926457774936 3734.078957933401 4125.407428640405 4747.487720027749 0.9606018165071394 0.811565871716261 0.7109936478206467 0.7606124213803753 0.6682919103376195 0.7683571732290517 0.8081042904322633 0.8262249166501408 0.7865378865922744 0.8689664243336457 1.0 12.21294855333007 -10.659418087604752 0.577769653358711 1.0311073787387894 0.7783440536482443 0.27960352550738043 0.0796226901819315 0.689838957847925 0.3344384498229266 0.09200027009323426 0.015813956614291996 2.190694976654827e-11 10.659418087604752 -0.2527633250905451 SST(ph)PTPR ddPTM_A549_MK2206_60min_R1 1 SSTPTPR 7 0 A0A669KBK8;Q04724;A0A669KAE5;F6T2C8 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 S(0.019)S(0.019)T(0.821)PT(0.141)PR 58.981 0.033301 118600000.0 971.67 1003.7 842.76 616.29 1233.9 895.38 669.43 759.85 1348.6 1523.9 1480.5 True False 1135.6641409493159 1054.7840428506784 962.2760404871465 767.2810776663098 1052.3949445374467 990.1285172948589 791.0567657577257 867.5610644430302 1043.1442532716694 1179.6499316054856 1112.8509902786748 1.0204997352475091 0.9478214532446473 0.8646944190130773 0.6894733296451225 0.9456746264600179 0.8897224569543813 0.7108379941861156 0.7795842138989154 0.9373620209570468 1.0600250544864802 1.0 10.120044714738299 -8.96844913034056 4.631382957721529 0.9736366288686177 0.8529282586712716 0.2876998317296817 0.0990747924609437 0.2163863176643684 9.893301380018038 0.017824741973319003 0.018403310819569592 1.0753525509095531e-09 8.96844913034056 -0.12070837019734604 SST(ph)PTPR ddPTM_A549_PD325901_60min_R1 1 SSTPTPR 7 0 A0A669KBK8;Q04724;A0A669KAE5;F6T2C8 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 S(0.315)S(0.131)T(0.549)PT(0.005)PR 79.47399999999999 0.017279 202900000.0 642.52 656.52 431.76 446.47 535.01 554.18 555.95 487.61 495.26 585.22 819.69 True False 707.7481574017755 711.84724445714 461.0618299837964 474.04743789306076 497.4327432843016 549.6669418177931 577.1069814775128 477.8842360273549 474.44594451304283 548.2691093257303 718.8733264430252 0.9845241593587888 0.9902262586085226 0.6413672799144233 0.6594311131818461 0.6919616085153577 0.7646228084960909 0.80279370544047 0.6647683513198621 0.6599854620571255 0.7626783317146538 1.0 9.489593763759283 -10.912225225294899 1.1735144636391386 0.9995974227342318 0.7506789540207275 0.0 0.13656462548525317 0.44208298967456594 1.084304525420959 0.08835641702744101 0.021112349957053942 1.2239812774557667e-11 10.912225225294899 -0.24891846871350432 SST(ph)PVPSK ddPTM_A549_MK2206_60min_R1 2 SSTPVPSK 8 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 S(0.342)S(0.043)T(0.615)PVPSK;S(0.009)S(0.001)T(0.99)PVPSK 135.43 0.0011300999999999998 46498000.0 8487.400000000001 9456.3 8393.4 7269.6 11776.2 8939.099999999999 7881.1 7149.5 12928.6 13217.2 14138.6 True False 9919.865622992611 9937.585278877017 9583.710330609912 9050.652326344749 10043.936579837815 9885.029628705652 9312.993855389232 8162.963519425467 10000.292742731805 10231.425340255939 10627.595414491107 0.9334064043750215 0.93507372940889 0.9017759857081293 0.8516180728901159 0.945080819142075 0.9301285232619093 0.8763030104336331 0.7680912945081607 0.9409741670346283 0.9627225107106565 1.0 13.375527591092542 -9.29947632084374 2.2172842432151154 0.9805374818024237 0.8949069858564519 0.3061890105009263 0.04978030754716022 0.2254620256733612 2.2721585480092417 0.010697055678652331 0.009631867471223379 5.017919376292753e-10 9.29947632084374 -0.08563049594597183 SST(ph)PVPSK ddPTM_A549_PD325901_60min_R1 2 SSTPVPSK 8 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 S(0.257)S(0.048)T(0.694)PVPSK;S(0.03)S(0.055)T(0.915)PVPSK 150.27 0.00068205 86978000.0 21688.6 20185.6 19735.6 21350.0 23553.4 22840.6 20676.9 21565.1 25168.0 23781.0 23703.0 True False 23890.41070569656 21886.71135336935 21074.976495803712 22668.741010631966 21899.09043881886 22654.593726376785 21463.770744333822 21134.967163006313 24110.2764840776 22279.46360150914 20787.681265696836 1.149258082243148 1.0528692966582134 1.0138204557995105 1.0904891565775157 1.053464797680732 1.0898085956205548 1.0325235638355033 1.0167063316427964 1.1598348163950158 1.071762805901493 1.0 14.343441223217459 -11.229416263901893 1.7028550748833073 0.9999631856543658 1.0831898280329875 0.0 0.05096337305417718 0.4284314660515412 2.2392125124756723 0.039076877196179076 0.008041967325208886 5.896356534565598e-12 11.229416263901893 0.08322664237862165 SST(ph)VTEAPIAVVTSR ddPTM_A549_MK2206_60min_R1 1 SSTVTEAPIAVVTSR 15 0 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.026)S(0.026)T(0.938)VT(0.011)EAPIAVVTSR 73.262 0.00086793 3361400.0 2544.1 2454.3 2046.2 1922.2 3149.6 2914.8 2092.1 2785.5 3691.6 4023.7 4220.6 True False 2973.481882726804 2579.213386837124 2336.3819284788055 2393.1390862908365 2686.2980122498907 3223.2422013123514 2472.2074894189636 3180.3531552359823 2855.458494273837 3114.7433754189847 3172.5085373658735 0.9372652107015854 0.8129886354785475 0.7364462225903726 0.754336531518952 0.8467425636875725 1.015991655609098 0.7792595229614833 1.0024726861339268 0.9000632971171506 0.9817919601266538 1.0 11.631408331092167 -8.419231051857885 0.32712538129175184 0.9953349339550759 0.7997062811090251 0.3428269960106469 0.08230486240143314 1.089959999526184 0.33688168952683384 0.058945296475559086 0.07260844545302461 3.8086314398305964e-09 8.419231051857885 -0.1956286528460508 SSTEES(ph)SPQDQPPVMR ddPTM_A549_PD325901_60min_R1 1 SSTEESSPQDQPPVMR 16 0 E9PHC0;E9PCZ3;D6RJC3;E7EQN9;O15327 E9PHC0 INPP4B Type II inositol 3,4-bisphosphate 4-phosphatase 1 S(0.024)S(0.024)T(0.024)EES(0.464)S(0.464)PQDQPPVMR 41.621 0.031391 941000.0 368.63 303.43 167.38 266.02 476.36 299.02 0.0 288.0 301.44 152.21 163.86 True False 406.0530462289368 329.00111098767746 178.73941333770577 282.45145122474526 442.9021169527861 296.5848802597649 0.0 282.2556140683707 288.7715250858372 142.59943462367892 143.70625879412236 2.8255766285771857 2.2894000146438556 1.2437830811097301 1.965477729326968 3.0819960151304207 2.0638271620769193 0.0 1.9641149692216122 2.009456842791652 0.9922980099841782 1.0 7.166979086187992 -7.54521622615376 24.99992277228706 1.4150110991393128 2.2431597584573195 0.3534172152605157 0.6828358428536221 262.78973866580884 294110.9784840035 0.1096813972519515 0.16268993597144016 2.8495991583441727e-08 7.54521622615376 0.8281486593180067 SSTFPQTDVLSSS(ph)LEAEHR ddPTM_A549_MK2206_60min_R1 1 SSTFPQTDVLSSSLEAEHR 19 0 D4PHA4;Q86WP2-4;Q86WP2;Q86WP2-2;Q86WP2-3 D4PHA4 GPBP1 Vasculin 1 SSTFPQTDVLS(0.002)S(0.248)S(0.75)LEAEHR 153.1 3.4807e-22 18343000.0 1777.7 1879.9 1440.7 1567.2 2133.1 1883.1 1687.3 1528.8 2710.8 2419.9 3041.7 True False 2077.732299407822 1975.5788802978889 1645.012923643543 1951.1640703542807 1819.3238157004837 2082.3683920993867 1993.8605692350375 1745.5120817536415 2096.808128258077 1873.2429093064584 2286.361943350655 0.9087503863727338 0.864070925447038 0.7194892866493319 0.8533924718388449 0.7957286994701597 0.9107781023715271 0.872066898696294 0.7634452134011642 0.9170936974157348 0.8193116206969522 1.0 11.158838092651674 -9.393932080370178 0.8379596906214052 0.9869443126816861 0.8340262704633078 0.0 0.07732092892551595 0.2911482631437928 0.43787622459523623 0.01807770482521711 0.012989186531436167 4.037085243005711e-10 9.393932080370178 -0.15291804221837835 SSTFPQTDVLSSS(ph)LEAEHR ddPTM_A549_PD325901_60min_R1 2 SSTFPQTDVLSSSLEAEHR 19 0 D4PHA4;Q86WP2-4;Q86WP2;Q86WP2-2;Q86WP2-3 D4PHA4 GPBP1 Vasculin 1 SSTFPQTDVLS(0.056)S(0.333)S(0.611)LEAEHR;SSTFPQTDVLS(0.011)S(0.21)S(0.779)LEAEHR 144.43 3.6795e-21 88181000.0 2408.2 3128.2 2688.6 2356.7200000000003 3420.8999999999996 2978.3 2932.3 2900.6 2908.8999999999996 2637.5 3543.8 True False 2652.67869117686 3391.8243924188546 2871.064563865191 2502.2892419005407 3180.6277854643245 2954.04571225222 3043.89028111613 2842.74525752332 2786.649048972237 2470.9677998814327 3107.93506599909 0.8535180545427896 1.0913433905120873 0.9237852474058194 0.8051291898841986 1.0233893945406052 0.9504850164244341 0.9793931393279055 0.9146733111071222 0.896623960860144 0.795051295284094 1.0 11.601740646535214 -11.074888441709158 1.419008171097052 0.9997228635315697 0.9356979743237783 0.0 0.09565811610593142 0.8336521707722079 3.018054454571548 0.049878190853147306 0.011207209667319364 8.416113006444104e-12 11.074888441709158 -0.06402488920779137 SSTGEAS(ph)ENGLEDIDR ddPTM_A549_MK2206_60min_R1 2 SSTGEASENGLEDIDR 16 0 H3BS87;H3BMJ8;Q9H7D3;H3BSP8;H3BTU3;Q9BQ70 H3BS87 TCF25 Transcription factor 25 1 SSTGEAS(0.999)ENGLEDIDR;S(0.067)S(0.067)T(0.067)GEAS(0.798)ENGLEDIDR 70.98 0.0012542999999999999 2235340.0 988.44 1496.56 1306.99 905.1500000000001 1663.65 1051.18 866.46 1235.85 1807.9 1300.35 1680.38 True False 1155.2645069621806 1572.7285116754122 1492.3408350613402 1126.9117906337274 1418.929288823828 1162.4151698831881 1023.8845663600961 1411.0355221318932 1398.4135366230544 1006.6000318677028 1263.0952698713133 0.9146297468756107 1.2451384699078518 1.1814950706080807 0.8921827335704767 1.123374715011316 0.9202909690269185 0.8106154704105665 1.1171251732069682 1.1071322725842585 0.7969312021651836 1.0 10.302747744205051 -6.223639181859745 24.997173851464865 1.026616999911198 1.1268928245783045 0.08173844928430019 0.1399850845981934 965.2456964885065 638313.2418640257 0.016698870147922814 0.04417990026169424 5.97531518249328e-07 6.223639181859745 0.1002758246671065 SSTGEAS(ph)ENGLEDIDR ddPTM_A549_PD325901_60min_R1 4 SSTGEASENGLEDIDR 16 0 H3BS87;H3BMJ8;Q9H7D3;H3BSP8;H3BTU3;Q9BQ70 H3BS87 TCF25 Transcription factor 25 1 S(0.081)S(0.081)T(0.081)GEAS(0.756)ENGLEDIDR;S(0.002)S(0.002)T(0.014)GEAS(0.983)ENGLEDIDR;S(0.029)S(0.029)T(0.029)GEAS(0.912)ENGLEDIDR;S(0.004)S(0.004)T(0.004)GEAS(0.989)ENGLEDIDR 79.02199999999999 0.00034855 4362800.0 1483.74 1585.08 1595.24 1741.76 1421.9099999999999 1434.0700000000002 1252.68 1351.63 1414.69 1649.62 1035.26 True False 1634.3681925283415 1718.6602544387436 1703.5025793574 1849.3445593760327 1322.039946923201 1422.391409384394 1300.3514228927977 1324.6706793167784 1355.2354990169947 1545.46271167409 907.9295830538452 1.8001045709195869 1.8929444381115814 1.8762496686445924 2.036881046606845 1.4561040543215746 1.5666318577263918 1.432216162093795 1.4590015613999638 1.4926658678293356 1.7021834518001773 1.0 9.826436599495253 -9.91054426900013 0.08985954405398328 9.679892521222144e-17 2.6140537306791725 0.24454180456963925 0.24070755929604912 7.004796374231124 0.23314618962138153 4.172877183667431 2.504706352403818 1.2287279320987665e-10 9.91054426900013 2.6140537306791725 SSTGPEPPAPT(ph)PLLAER ddPTM_A549_MK2206_60min_R1 2 SSTGPEPPAPTPLLAER 17 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSTGPEPPAPT(1)PLLAER;SSTGPEPPAPT(1)PLLAER 176.28 3.8758e-30 22477000.0 6230.299999999999 6482.5 5209.700000000001 5187.6 7839.1 6776.4 6046.5 6021.5 8855.9 8731.5 8692.599999999999 True False 7281.822323789482 6812.431561003809 5948.513797671797 6458.562232880211 6685.978774392974 7493.474150189726 7145.070782836275 6875.066065070346 6850.052789966324 6759.048085709884 6533.987516444719 1.114453051136479 1.0426147193973516 0.9103956477879084 0.9884564695946115 1.0232616388638214 1.1468454953931537 1.0935237884758093 1.0522006734428557 1.048372494242778 1.0344445973762166 1.0 12.673747983089655 -5.287389579756049 5.092281572272802 1.0288225282762515 1.117043327452386 0.1383109475162877 0.05694503585291732 0.22664719942998887 16.770637187495502 0.008257946765797209 0.06380922954192393 5.159533305672235e-06 5.287389579756049 0.08822079917613457 SSTGS(ph)YEER ddPTM_A549_MK2206_60min_R1 2 SSTGSYEER 9 0 Q7Z674;H7C434;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 SST(0.001)GS(0.999)YEER;SSTGS(1)YEER 139.64 1.4726e-13 34004000.0 2590.3 3457.0 3385.0 2886.6 4036.5 2931.2 2813.5 2743.7 4440.6 4463.4 4582.8 True False 3027.4793132452514 3632.946533959148 3865.043899863529 3593.8171295843986 3442.7361971192154 3241.3776384269136 3324.676531466113 3132.6278772288492 3434.811190181059 3455.1148400340708 3444.7642811544147 0.8788639994347242 1.0546284846932021 1.1220053345909258 1.043269389794077 0.9994112560774349 0.9409577474313157 0.9651390516485332 0.9093881675349461 0.9971106612351367 1.003004721959143 1.0 11.750189550017053 -6.900924164495394 5.196486211243897 0.9842585385819357 1.0334161637117945 0.12322473143895074 0.060990752921511564 0.35582847631091113 15.399502943823421 0.008851475638544203 0.01698384970261736 1.2562493079114468e-07 6.900924164495394 0.04915762512985877 SSTGS(ph)YEER ddPTM_A549_PD325901_60min_R1 2 SSTGSYEER 9 0 Q7Z674;H7C434;F8W6C0;G3V0F5;Q9UHY8;Q9UHY8-2 Q7Z674 DKFZp779C2259;FEZ2 Fasciculation and elongation protein zeta-2 1 SSTGS(1)YEER;SST(0.003)GS(0.997)YEER 146.57 2.9839e-05 76667000.0 10442.4 10319.3 9262.5 10386.2 11507.400000000001 12042.3 10400.0 10628.900000000001 10274.8 11204.2 12554.5 True False 11502.50476071142 11188.943626586499 9891.108949937272 11027.731985228365 10699.159922374862 11944.231501411838 10795.777691098361 10416.898251289253 9842.98588757948 10496.764899879261 11010.376089532583 1.0446968084629458 1.0162181142226083 0.8983443317018587 1.0015763217854368 0.9717342836768682 1.084815941279886 0.9805094397603513 0.9460983136799894 0.8939736306498263 0.9533520757622798 1.0 13.426576128491403 -8.125380443869746 4.861770891530986 0.9483952747752868 0.999717055273727 0.20948376053810547 0.04894430152882431 0.338994399516467 12.103117156308024 0.009148098445123381 0.011908431869919503 7.492375863624356e-09 8.125380443869746 0.05132178049844016 SSTLEPEDDDEDEEDT(ph)VTR ddPTM_A549_MK2206_60min_R1 4 SSTLEPEDDDEDEEDTVTR 19 0 Q9NVM1 Q9NVM1 EVA1B Protein eva-1 homolog B 1 SSTLEPEDDDEDEEDT(0.829)VT(0.17)R;SSTLEPEDDDEDEEDT(0.893)VT(0.107)R;SSTLEPEDDDEDEEDT(0.988)VT(0.012)R;SSTLEPEDDDEDEEDT(0.971)VT(0.029)R 168.89 5.52e-34 9133000.0 1167.42 1140.82 1174.93 1046.15 1767.52 1431.39 1161.73 1729.0900000000001 1503.23 2017.2 1881.1599999999999 True False 1364.4519553213029 1198.882865163805 1341.5527412900021 1302.456796963458 1507.5201494195853 1582.8587397202175 1372.8013033233087 1974.19380261604 1162.7508051650389 1561.5131189937565 1414.0160546252152 0.9649479939483082 0.8478566146701699 0.9487535427209703 0.92110467395554 1.066126614679176 1.1194064837826427 0.9708526991846422 1.3961608117238102 0.8223038213475065 1.1043107423611505 1.0 10.465582785146522 -6.568709762872194 24.962440599584227 0.9802363129504368 0.9168652433337473 0.004329039713552363 0.15034671019260581 409.36844857702863 222966.25821024732 0.023081791476197062 0.0480485953281118 2.699542922629193e-07 6.568709762872194 -0.06337106961668948 SSTLEPEDDDEDEEDT(ph)VTR ddPTM_A549_PD325901_60min_R1 4 SSTLEPEDDDEDEEDTVTR 19 0 Q9NVM1 Q9NVM1 EVA1B Protein eva-1 homolog B 1 SSTLEPEDDDEDEEDT(0.986)VT(0.014)R;SSTLEPEDDDEDEEDT(0.952)VT(0.048)R;SSTLEPEDDDEDEEDT(1)VTR;SSTLEPEDDDEDEEDT(0.982)VT(0.018)R 228.76 6.400399999999999e-75 12499600.0 2375.31 1732.7400000000002 2218.42 2126.71 2234.4700000000003 1984.17 1586.19 1575.1999999999998 1840.69 2513.86 1928.48 True False 2616.449722589197 1878.7640808515598 2368.975321643167 2258.0720465911527 2077.5285357030234 1968.0115773694665 1646.5533284464732 1543.781400279505 1763.3322004718998 2355.1344505819698 1691.2891856419442 1.5470149899859376 1.1108473327927404 1.4006920529938827 1.3351188346504332 1.2283697863972793 1.1636162485261146 0.9735492560496145 0.9127838180396978 1.0425965088889344 1.392508431187099 1.0 10.723907645191405 -7.3384413411835165 1.7489115255496346 1.0080663741277018 1.3322847871900108 0.3726250092172466 0.15548038905480238 0.1464457436075557 0.8754193679206782 0.01493784424381165 0.02727953629804139 4.587316010768691e-08 7.3384413411835165 0.3242184130623089 SSTLSSSSMSLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SSTLSSSSMSLSPK 14 0 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 SSTLSSSS(0.002)MS(0.025)LS(0.973)PK;SSTLSSSS(0.003)MS(0.024)LS(0.973)PK 89.62899999999999 2.5526999999999998e-05 6309700.0 1434.46 1328.4 1397.1 1429.25 2142.6 1705.31 1449.15 1635.1799999999998 2413.8 1888.6 2628.7 True False 1676.5617788201316 1396.0098859448453 1595.2297880352548 1779.4163141614715 1827.4263782850567 1885.7647723068364 1712.4417968985679 1866.9717725287285 1867.0781540465352 1461.963948310334 1975.9212415707875 0.8484962576176995 0.706510895563361 0.8073347026560146 0.9005502227137852 0.9248477823095405 0.9543724378445976 0.8666548852611338 0.9448614313415407 0.9449152702879362 0.7398897878885721 1.0 10.948309728214381 -4.851043072720167 0.23947472104453366 0.9969680868528756 0.5185973383831318 0.0018937843044940506 0.08875123046363662 5.087878242844388 0.19370797920626123 0.029500045703502745 0.7440085973822215 1.4091490340580308e-05 4.851043072720167 -0.4783707484697438 SSTLSSSSMSLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SSTLSSSSMSLSPK 14 0 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 SSTLSSSS(0.001)MS(0.081)LS(0.918)PK;SSTLSSSSMS(0.007)LS(0.993)PK 119.25 9.498399999999999e-07 16526500.0 3240.8999999999996 2829.2 2688.0 2882.1 3366.6 3098.0 3273.6000000000004 2874.7 3844.3 3320.8 3591.3 True False 3569.9137821755185 3067.626613078263 2870.4238442570972 3060.1207712759906 3130.1416301394943 3072.770915138627 3398.1786393826537 2817.3618533414783 3682.737439913362 3111.124121268727 3149.592867126399 1.1334524596611144 0.9739756033538011 0.9113634572318523 0.9715924884183395 0.9938242059188267 0.9756089262235781 1.0789263192874377 0.8945162032678722 1.169274123761078 0.987786121101814 1.0 11.620949635008209 -8.763887028445621 24.999993621487313 1.0799349955941082 0.9901690044324908 0.0783847241483796 0.07831346474386482 77.77482067088208 794378.8430806699 0.014351255357404686 0.015628557924165554 1.7223165370943213e-09 8.763887028445621 -0.08976599116161743 SSTPLHS(ph)PSPIR ddPTM_A549_PD325901_60min_R1 2 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.018)S(0.018)T(0.065)PLHS(0.545)PS(0.354)PIR;S(0.081)S(0.081)T(0.081)PLHS(0.475)PS(0.281)PIR 68.972 0.0011957 54996000.0 2080.19 2219.6000000000004 2051.1800000000003 2177.2799999999997 2942.3 1832.39 1884.42 2488.4 2708.5 2521.3 2659.9 True False 2291.369357445058 2406.653481686878 2190.3854095473503 2311.7656406383494 2735.642998383957 1817.4676233669686 1956.1326342941898 2438.766909887963 2594.671164062468 2362.10468771225 2332.7491624953377 0.9822613568078551 1.0316812113277043 0.9389716840383725 0.9910048100351508 1.1727120268077365 0.7791097528132115 0.8385524966609432 1.045447555655413 1.1122803967859762 1.0125840899179708 1.0 11.187815469189642 -8.484400068778964 24.901904549999966 1.054381469591451 0.964298547353015 0.12920033024409683 0.0990030066850344 780.3766194249807 505030.28652620787 0.01698126392017533 0.020526707676173227 3.277931933878072e-09 8.484400068778964 -0.09008292223843606 SSTPLPTISSS(ph)AENTR ddPTM_A549_PD325901_60min_R1 2 SSTPLPTISSSAENTR 16 0 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 SSTPLPTIS(0.001)S(0.247)S(0.752)AENTR;SSTPLPTISS(0.017)S(0.983)AENTR 205.45 7.0892e-40 48006000.0 13431.8 12638.4 15064.1 13669.8 13812.8 14266.8 13571.7 15168.4 14966.3 14369.599999999999 14880.5 True False 14795.386448031457 13703.482322468657 16086.440413792172 14514.152499631695 12842.636579573104 14150.615910942457 14088.178470219204 14865.854362620403 14337.318457710207 13462.301003668717 13050.292835261434 1.1337206478658348 1.0500517111341998 1.232649766319969 1.1121706373066942 0.9840880002993304 1.084314052532828 1.0795296816752984 1.1391203668973147 1.0986204400694577 1.031570798725225 1.0 13.671794559313154 -14.999999989870481 0.2210767011824386 0.4549741668430491 1.1140606875317989 0.22858790078669688 0.05893661389624481 42.78109469507517 0.5271725541490817 10.094914120203878 0.039683351435222634 1.0000000233240787e-15 14.999999989870481 0.6590865206887497 SSTPPRQS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.01)S(0.008)T(0.027)PPRQS(0.653)PS(0.302)R 56.648 0.0041133 12014000.0 926.81 1109.1 1210.3 1032.6 1571.8 1151.8 1274.5 1085.7 1366.7 1719.2 1660.0 True False 1083.2328696710156 1165.5484526508785 1381.9387391447067 1285.587046355175 1340.59030215087 1273.6827114970388 1506.0601526047844 1239.6012998168026 1057.1446321714309 1330.8315259637438 1247.7761863306994 0.8681307445499887 0.9341005746217792 1.1075213281706677 1.0303025978846936 1.0743836249136205 1.0207621570680252 1.206995428429848 0.9934484352214347 0.8472229585340514 1.0665626901225636 1.0 10.285143465795032 -8.529316249250382 24.89329487178388 0.9274595095993773 1.0390751250457895 0.027335790203816268 0.09808738329053063 180.55208098687507 698177.1114374318 0.016512265747126043 0.018747011414744157 2.955859253128982e-09 8.529316249250382 0.11161561544641219 SSTPPRQS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.008)S(0.008)T(0.012)PPRQS(0.506)PS(0.466)R;SST(0.004)PPRQS(0.679)PS(0.316)R 58.268 0.0032588 29239000.0 2377.0 2544.6 2823.3 2703.0 3591.8999999999996 3076.6000000000004 2052.1 2302.7 2901.3999999999996 3048.9 3822.7 True False 2618.311290145087 2759.042372274478 3014.9061158820923 2869.958171041599 3339.6173353822987 3051.5451896434797 2130.1937884522063 2256.770842066797 2779.4642478902847 2856.391933671472 3352.532134091856 0.7809951360404612 0.8229726850990665 0.8992922350314113 0.8560568717170618 0.996147747972875 0.9102210113401618 0.6353984699476235 0.6731541270306475 0.8290641630622863 0.8520103072614457 1.0 11.71103544512078 -10.428713695533897 1.0055358848985974 0.9903812849972626 0.8264508464443975 0.07057491647868208 0.10576807872873459 0.5196369535603482 1.011986667157657 0.05238103046828792 0.01944142497480076 3.726372828484689e-11 10.428713695533897 -0.16393043855286515 SSTPPRQSPS(ph)R ddPTM_A549_MK2206_60min_R1 1 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSTPPRQS(0.196)PS(0.803)R 68.277 0.0011654000000000002 11804000.0 998.27 963.89 1054.2 714.03 1155.9 864.78 834.53 789.48 1198.0 1409.2 1479.1 True False 1166.7535706417548 1012.9478838929365 1203.7014118865982 888.9673820540246 985.8686412114705 956.290445605495 986.1532986687097 901.3912076810997 926.6549128128877 1090.860741268095 1111.7986489167097 1.0494288437736374 0.9110893279821043 1.0826613371579779 0.7995758790678487 0.8867330808254353 0.8601291668570246 0.8869891141076457 0.8107504075125274 0.8334736813323003 0.9811675363439092 1.0 10.118679818665928 -6.255629462938788 24.99597941504622 0.896065374691142 1.0040627783847624 0.38896033718349454 0.07191670627488955 521.647202669131 2244272.6201409316 0.011458838935160707 0.029451340439662643 5.550991177209282e-07 6.255629462938788 0.10799740369362043 SSTPT(ph)PR ddPTM_A549_PD325901_60min_R1 1 SSTPTPR 7 0 A0A669KBK8;Q04724;A0A669KAE5;F6T2C8 A0A669KBK8 TLE1 Transducin-like enhancer protein 1 1 S(0.002)S(0.002)T(0.091)PT(0.906)PR 60.59 0.030382 139760000.0 1242.6 1259.8 789.69 916.79 1425.4 797.19 1106.1 1339.4 880.92 1267.8 1304.5 True False 1368.7478372462288 1365.9677672684836 843.2831121917362 973.418036118842 1325.2848213630475 790.6979489475024 1148.193240781145 1312.6846162610273 843.8979958818195 1187.750891635899 1144.0547699068263 1.1964006210626628 1.193970606302118 0.737100298319122 0.8508491566344492 1.1584102931286941 0.6911364470880167 1.0036173712860406 1.1473966551163757 0.7376377583308777 1.0381940820303834 1.0 10.159940405293726 -5.739688406145666 24.507411528896306 0.8982403473370673 1.1951861043625458 0.2853578635479763 0.15600521690089159 158.70456319407913 178813.01965493732 0.021233294835377326 0.08207491803448723 1.821006910338521e-06 5.739688406145666 0.29694575702547854 SSTRAPS(ph)PTK ddPTM_A549_MK2206_60min_R1 1 SSTRAPSPTK 10 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BUG0;H3BTY0;H3BNI3;H3BP82;H3BTR6;H3BNU7;H3BTV0 H3BMM9 RNPS1 RNA-binding protein with serine-rich domain 1 1 S(0.019)S(0.019)T(0.017)RAPS(0.914)PT(0.031)K 47.666000000000004 0.0091203 5499600.0 1285.0 1668.7 1695.8 1271.0 2519.3 1355.9 1447.5 1243.8 2747.5 3288.7 4361.4 True False 1501.876584766301 1753.6297024060236 1936.2899395534942 1582.395057057358 2148.71430729653 1499.3804380264226 1710.492013256514 1420.112458977747 2125.1956368559336 2545.780385898653 3278.3440114835607 0.4581204960508862 0.5349132660463071 0.5906304929473396 0.4826812108535465 0.6554267336709928 0.45735909128947777 0.5217548882194516 0.43317981700617764 0.6482527853732505 0.7765446142873218 1.0 11.678751535567041 -10.010355439209352 0.6480691810701821 0.9958670519463596 0.5181929636484591 0.6820903248672582 0.09138012710319905 0.1834462595138713 0.15287019440684882 0.042155492032902496 0.016165864980436134 9.764377488501621e-11 10.010355439209352 -0.4776740882979005 SSTRPPS(ph)IADPDPSDLPVDR ddPTM_A549_MK2206_60min_R1 2 SSTRPPSIADPDPSDLPVDR 20 1 Q9NX94;Q9NX94-2 Q9NX94 WBP1L WW domain binding protein 1-like 1 S(0.084)S(0.084)T(0.084)RPPS(0.749)IADPDPSDLPVDR;S(0.027)S(0.027)T(0.024)RPPS(0.922)IADPDPSDLPVDR 82.476 3.9063e-05 7799800.0 1962.1999999999998 2369.8 2314.8 1866.21 2749.3 2297.1 1915.74 1871.69 2911.6000000000004 2708.0 3102.6 True False 2293.3713888159036 2490.412697765804 2643.073447386737 2323.43153377735 2344.8816119756884 2540.177597308428 2263.8051602597816 2137.0077893102243 2252.127248869785 2096.260919212319 2332.13879259616 0.9833768882438167 1.067866417587202 1.133325964894414 0.996266406250583 1.0054640055814787 1.0892051559592975 0.9706991571199292 0.9163295924301684 0.9656917744431046 0.898857703438285 1.0 11.187437934877927 -7.78155874542598 24.98774898763216 0.9763606221899976 1.0467926059860182 0.4318233373195207 0.05074766803676591 202.00029651464038 250878.35185479853 0.007225471480736171 0.0099900175894436 1.653641087661179e-08 7.78155874542598 0.07043198379602056 SSTS(ph)PCGT(ph)SKSPNREWEVLQPAPHQVITNLPEGVR ddPTM_A549_PD325901_60min_R1 1 SSTSPCGTSKSPNREWEVLQPAPHQVITNLPEGVR 35 2 O75376-2;O75376;A0A088AWL3 O75376-2 NCOR1 Nuclear receptor corepressor 1 2 S(0.229)S(0.244)T(0.259)S(0.275)PCGT(0.358)S(0.337)KS(0.298)PNREWEVLQPAPHQVITNLPEGVR 53.801 0.0016542999999999998 4450500.0 1199.0 1252.2 1258.3 1277.3 1301.1 1065.0 1184.4 1119.2 1415.3 1208.8 1751.4 True False 1320.7215973428513 1357.7272885962818 1343.6958047725836 1356.1959200412266 1209.7152245513264 1056.3269930996248 1229.4729901285489 1096.8766780045848 1355.8198628383268 1132.4761617049012 1535.9889030393372 0.8598510020023414 0.8839434229698403 0.8748082763578215 0.8829464310306244 0.787580705926718 0.6877178546078154 0.8004439274891438 0.7141175797781747 0.8827016003536868 0.7372944944224628 1.0 10.584952077812336 -9.617133621032417 1.1186964423361505 0.9765273780920115 0.8153010755876875 0.0 0.09711527452903276 0.26847556864052513 0.6935394939610963 0.020173501896329184 0.014186938471366506 2.414717774753505e-10 9.617133621032417 -0.16122630250432401 SSTS(ph)PCGTSK ddPTM_A549_PD325901_60min_R1 2 SSTSPCGTSK 10 0 O75376-2;O75376;A0A088AWL3;O75376-3;H0Y459 O75376-2;H0Y459 NCOR1 Nuclear receptor corepressor 1 1 S(0.108)S(0.09)T(0.182)S(0.618)PCGT(0.002)SK;S(0.001)S(0.011)T(0.076)S(0.912)PCGTSK 136.5 5.2338e-07 28186000.0 8287.400000000001 8323.4 8298.9 7401.1 7705.299999999999 5823.2 6070.9 5879.200000000001 5807.4 7850.2 10109.9 True False 9128.730747138577 9024.842128974846 8862.113259339745 7858.24913788235 7164.106309841926 5775.777789875804 6301.931421623949 5761.934743856826 5563.335173777503 7354.537032276485 8866.446391936395 1.0295816772140773 1.0178646246801315 0.9995112886939022 0.8862907178944935 0.8080019878490818 0.651419693365382 0.7107618027618429 0.6498584087867522 0.6274594045746543 0.8294796705662238 1.0 13.114140283215455 -6.453533815213369 2.147887041715783 0.7838198854071193 1.0215953527952248 0.5513651766121177 0.10206319407973613 0.3076941911546077 2.7728015673518973 0.022381963299615382 0.06116084149809625 3.519380187169389e-07 6.453533815213369 0.2377754673881055 SSTSPCGT(ph)SKSPNREWEGK ddPTM_A549_MK2206_60min_R1 1 SSTSPCGTSKSPNREWEGK 19 2 H0Y459 H0Y459 NCOR1 1 S(0.019)S(0.019)T(0.018)S(0.017)PCGT(0.716)S(0.106)KS(0.106)PNREWEGK 41.482 0.029535000000000002 7975600.0 1967.1 1517.1 1523.5 969.2 2219.2 1535.5 1724.6 1602.8 2258.9 2791.4 2818.1 True False 2299.0983890224056 1594.3139099419786 1739.5552086978105 1206.6540435090412 1892.7586197564647 1697.9855908175919 2037.9374964160147 1830.001808369136 1747.2627567220638 2160.8208012885048 2118.287994396713 1.0853568519030328 0.7526426596191128 0.8212080761913748 0.5696364454223777 0.8935322414908559 0.8015839183855531 0.9620681898810542 0.8639060473409892 0.8248466503817782 1.020078859439462 1.0 11.04868303066966 -7.746644317726805 24.341560281931162 0.9133879188939205 0.8094954266696698 0.1550531861412917 0.1263719118244549 276.2442657653981 454488.8681521061 0.019210587001896075 0.02842237717565081 1.792072940677773e-08 7.746644317726805 -0.10389249222425068 SSTSPCGTSKS(ph)PNREWEGK ddPTM_A549_MK2206_60min_R1 1 SSTSPCGTSKSPNREWEGK 19 2 H0Y459 H0Y459 NCOR1 1 S(0.006)S(0.006)T(0.006)S(0.025)PCGT(0.141)S(0.128)KS(0.687)PNREWEGK 59.356 0.00076954 8881000.0 1576.5 1830.4 1289.8 1327.7 1926.5 1794.3 1926.8 1467.7 2524.5 2789.9 2433.2 True False 1842.5746582755444 1923.5595417294828 1472.713034577248 1652.9865596027184 1643.1144020191189 1984.171635040056 2276.874619096823 1675.7509696427383 1952.7047807981096 2159.6596523303006 1828.9692870963004 1.0074388188337728 1.0517177928030466 0.805214743061842 0.903780381258903 0.898382719497577 1.0848578207620736 1.2448949444698572 0.9162269598868913 1.0676531282262556 1.1808069537127162 1.0 10.836815133545388 -7.2589618567087255 24.90376206215387 1.0441003625606848 0.9311286808570646 0.305864512906849 0.10337884073436915 236.21742853942783 2374424.0362870186 0.014186057551282057 0.0238427248923613 5.5085607496401036e-08 7.2589618567087255 -0.11297168170362026 SSTTVSSFANSKPGS(ph)AKK ddPTM_A549_MK2206_60min_R1 1 SSTTVSSFANSKPGSAKK 18 2 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SSTTVSSFANS(0.161)KPGS(0.839)AKK 103.95 1.2553e-09 8575400.0 2700.1 2850.0 2806.7 2934.0 3904.8 2868.4 2985.5 2649.4 3995.3 4175.5 3961.4 True False 3155.8108688929883 2995.05282666577 3204.732264031603 3652.8301317122637 3330.409092657282 3171.932184110181 3527.926705062053 3024.9605634472105 3090.37092918308 3232.251649989304 2977.6750509219487 1.059823793706397 1.0058360215425257 1.0762531872103884 1.2267390058499745 1.1184595483735271 1.0652378549929706 1.1847923781910774 1.015880010987304 1.0378469363963132 1.0854950908725025 1.0 11.539970608091046 -8.31572424648765 24.880878935458707 1.0182220938541675 1.1039981417195561 0.22001537851820685 0.060984201743220695 264.59935872020145 121275.66761947342 0.009818035189278143 0.01186942744018325 4.833656156532904e-09 8.31572424648765 0.08577604786538862 SSTTVSSFANSKPGS(ph)AKK ddPTM_A549_PD325901_60min_R1 2 SSTTVSSFANSKPGSAKK 18 2 A0A669KAU9;A0A669KAX4;Q13620-1;K4DI93;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SSTTVSSFANS(0.376)KPGS(0.624)AKK;SSTTVSSFANS(0.157)KPGS(0.843)AKK 103.26 1.3345e-09 30693000.0 6199.0 6099.7 7269.8 7203.2 7960.5 8698.5 7767.0 7773.4 8272.7 7556.2 7798.4 True False 6828.317916537397 6613.743125899009 7763.172344858726 7648.125304345864 7401.3819422341385 8627.66229997848 8062.5774352654835 7618.353438885668 7925.027188089193 7079.100242450838 6839.24623813062 0.9984021160793575 0.9670280752615147 1.135091803183949 1.1182702066940544 1.0821926400265371 1.261493152838534 1.1788693014610976 1.1139171150778746 1.1587573998878786 1.0350702396095885 1.0 12.739621617312253 -5.757227973341666 24.987507104083807 1.1046979726730384 0.9827150531160918 0.3608810121929479 0.06809743879423438 110.10012286258679 653229.6716794567 0.011392056225553556 0.04118881639793906 1.7489283861128273e-06 5.757227973341666 -0.12198291955694662 SSTVAS(ph)LDTDSTK ddPTM_A549_MK2206_60min_R1 2 SSTVASLDTDSTK 13 0 C9IZZ8;C9J6Y2;C9J0J6;C9JZ07;G3V1A3;C9J5T5;C9JBU8;A8MPU2;O14713-2;O14713 C9IZZ8 ITGB1BP1 Integrin beta-1-binding protein 1 1 SSTVAS(1)LDTDSTK;SST(0.001)VAS(0.999)LDTDSTK 210.38 2.3516e-37 10143000.0 5514.4 6340.0 5907.7 4920.799999999999 7868.7 6109.0 5943.299999999999 5416.3 8501.6 8291.2 8809.4 True False 6445.095905864036 6662.678919670518 6745.500693419138 6126.396220903108 6711.22465360386 6755.450325173997 7023.120678678714 6184.077111723082 6576.00117426548 6418.212161511516 6621.782852928712 0.973317314839684 1.0061759903110865 1.0186834638402116 0.9251883302385094 1.0135072083548602 1.0201860247027228 1.0606087264810409 0.9338991098126936 0.993086200547488 0.9692574196498818 1.0 12.693003986103816 -5.243862307842506 21.589842512179366 0.9965995462842872 0.9733171919660222 0.02087100396777153 0.03732069782875158 1597.5868079064583 1962087.266973146 0.0045982369531030656 0.1517078221046236 5.703450703305205e-06 5.243862307842506 -0.023282354318264975 SSTVAS(ph)LDTDSTK ddPTM_A549_PD325901_60min_R1 2 SSTVASLDTDSTK 13 0 C9IZZ8;C9J6Y2;C9J0J6;C9JZ07;G3V1A3;C9J5T5;C9JBU8;A8MPU2;O14713-2;O14713 C9IZZ8 ITGB1BP1 Integrin beta-1-binding protein 1 1 SSTVAS(1)LDTDSTK;SST(0.004)VAS(0.996)LDTDSTK 249.32 1.3568999999999997e-68 21721000.0 13982.599999999999 13969.8 13730.400000000001 12444.0 15534.7 15041.7 13183.400000000001 14484.5 14351.1 15641.4 16924.7 True False 15402.103258553921 15147.084073017362 14662.227511602548 13212.637617625483 14443.59626380561 14919.205382259732 13685.10150123329 14195.595284629573 13747.973174294571 14653.79933462197 14843.069194512895 1.0376629696132986 1.020481941741325 0.9878164225646001 0.8901553610293658 0.9730869050415153 1.0051294100127879 0.9219859667764888 0.9563787043367906 0.9262217263917929 0.987248603546166 1.0 13.85750181745683 -5.850669138390589 3.5788090780753046 0.9596430340063414 1.0306636583689714 0.4022729348154739 0.03341562548452545 0.18854296122774336 4.639193638403074 0.005116731115269492 0.018827829512141594 1.4103628558622384e-06 5.850669138390589 0.07102062436263001 SSTVATLQGT(ph)PDHGDPR ddPTM_A549_MK2206_60min_R1 2 SSTVATLQGTPDHGDPR 17 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 SSTVATLQGT(1)PDHGDPR;SSTVATLQGT(1)PDHGDPR 111.4 4.0402e-09 43229000.0 4680.5 5724.299999999999 4738.6 4848.9 6151.3 5444.2 4080.9 5218.0 7381.799999999999 7297.700000000001 7671.9 True False 5470.45397276161 6015.6424195378495 5410.604733794193 6036.880717675395 5246.451918577838 6020.301630432519 4822.346705974785 5957.667479454799 5709.83408631233 5649.144501527236 5766.755496331619 0.9486190243788741 1.0431589172394347 0.938240703500611 1.0468418023818784 0.909775335873914 1.0439668604403616 0.8362322122105582 1.0331056142825241 0.9901293873035717 0.9796053439617479 1.0 12.493544139776434 SSVKT(ph)PESIVPIAPELQPSTSR ddPTM_A549_MK2206_60min_R1 2 SSVKTPESIVPIAPELQPSTSR 22 1 Q14676;Q14676-2;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.203)S(0.203)VKT(0.571)PES(0.023)IVPIAPELQPSTSR;S(0.19)S(0.19)VKT(0.604)PES(0.016)IVPIAPELQPSTSR 83.46700000000001 2.243e-05 28073000.0 2158.0 2493.9 2567.3 2346.9 3037.3 2651.0 2436.0 1676.72 3503.4 3297.3999999999996 3333.0 True False 2522.217641965506 2620.828857691846 2931.381744200781 2921.8906053563433 2590.517193486981 2931.527060408621 2878.589667905262 1914.4001947396423 2709.885493780193 2552.515049856243 2505.324113879651 1.0067430509259316 1.0461037129576536 1.170060882726009 1.1662724951110668 1.0340048136428157 1.1701188856834048 1.1489889280024475 0.7641327459923235 1.0816506649847255 1.0188362598336682 1.0 11.290781541670993 SSVKT(ph)PESIVPIAPELQPSTSR ddPTM_A549_PD325901_60min_R1 4 SSVKTPESIVPIAPELQPSTSR 22 1 Q14676;Q14676-2;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.165)S(0.165)VKT(0.669)PESIVPIAPELQPSTSR;S(0.007)S(0.007)VKT(0.716)PES(0.27)IVPIAPELQPSTSR;S(0.142)S(0.142)VKT(0.688)PES(0.028)IVPIAPELQPSTSR;S(0.201)S(0.201)VKT(0.567)PES(0.031)IVPIAPELQPSTSR 103.86 2.6328e-10 42330000.0 5665.7 6558.200000000001 5641.900000000001 6290.8 6703.7 6782.8 7275.4 7833.1 6864.9 8165.800000000001 6971.1 True False 6240.877693132102 7110.882530004901 6024.793261500794 6679.368428556604 6232.855238509509 6727.563125630169 7552.269328251642 7676.862675551923 6576.39212633281 7650.209994415856 6113.698893443836 1.020802267482399 1.163106435881299 0.985457963584307 1.0925249255764586 1.019490057842635 1.1004079924257677 1.2353027945734276 1.2556821671058058 1.075681390423914 1.2513226653376295 1.0 12.577829784281041 -9.769036548993304 1.3839623602992321 1.015874247491738 1.1068291247054882 0.0 0.10814413516936679 0.48607363803977566 1.877144754209653 0.022926393416755023 0.01590892706863192 1.7020152655843902e-10 9.769036548993304 0.09095487721375028 SSVKT(ph)PETVVPTALELQPSTSTDRPVTSEPTSQATR ddPTM_A549_PD325901_60min_R1 2 SSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATR 36 2 Q14676;Q14676-2;H0Y6Z8 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.149)S(0.149)VKT(0.695)PET(0.007)VVPTALELQPSTSTDRPVTSEPTSQATR;S(0.056)S(0.056)VKT(0.845)PET(0.043)VVPTALELQPSTSTDRPVTSEPTSQATR 107.71 1.4027000000000002e-14 32791000.0 2773.4 3135.6 3426.7 3176.8 3857.2 4175.6 3603.3 3543.4 3696.6000000000004 3440.3999999999996 3319.0 True False 3054.953526330829 3399.848016389158 3659.256468421057 3373.023720963726 3586.283578617613 4141.595298015769 3740.425553301419 3472.7241072564766 3541.2447572727756 3223.172556857661 2910.7840408744805 1.0495294337992302 1.1680179527739025 1.2571377391919858 1.1588024647649147 1.232067899321103 1.4228452677552534 1.2850233822835206 1.193054537365532 1.2165948100391835 1.10732108998692 1.0 11.507192090554575 -10.461959256605605 0.7524493713402478 0.9967409522407771 1.2264483123905088 0.30665381261901403 0.0920281881748381 0.50060824688 0.501836690064636 0.06581233798125402 0.018141228994611413 3.4517612056041944e-11 10.461959256605605 0.2297073601497317 SSVLPS(ph)PSAGR ddPTM_A549_PD325901_60min_R1 2 SSVLPSPSAGR 11 0 P35658-4;P35658-3 P35658-4 NUP214 Nuclear pore complex protein Nup214 1 SSVLPS(0.852)PS(0.148)AGR;SSVLPS(0.776)PS(0.224)AGR 77.593 0.0011277000000000001 16420300.0 5343.9 5494.7 5405.4 5192.4 6105.700000000001 5616.5 5415.7 5144.299999999999 6293.4 6059.4 6760.2 True False 5886.408794028743 5957.75765265133 5772.242949310757 5513.122755204 5676.856695521504 5570.761086144638 5621.797427084755 5041.692900874721 6028.910283888028 5676.8084498963235 5928.738256438583 0.9928602915866844 1.004894700180301 0.9736039439828746 0.9298981531553991 0.9575151490886721 0.939620007696379 0.9482283048976751 0.8503821020264244 1.0168960111100636 0.9575070115013653 1.0 12.533509390299658 SSVLPS(ph)PSGR ddPTM_A549_MK2206_60min_R1 1 SSVLPSPSGR 10 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 SSVLPS(0.846)PS(0.154)GR 60.305 0.0080743 13696000.0 2438.0 2058.0 1997.0 1630.7 2245.4 2083.3 1798.0 1882.2 2748.3 3099.2 3454.1 True False 2849.474796622757 2162.743409571283 2280.2046286639493 2030.2215732049049 1915.1046344633933 2303.7534232173803 2124.6733263110273 2149.0076139957505 2125.8144381332713 2399.0885675121194 2596.3516416896787 1.0974918616063687 0.8329932567083987 0.8782341313289966 0.7819516973762682 0.7376137360257808 0.887304087098973 0.8183303417746265 0.8277028348121592 0.8187698476581599 0.9240229747734854 1.0 11.342270075304981 -10.757814753400881 0.954125607325611 1.0021343605623607 0.8461051240161065 0.15837469680311722 0.0898704578024635 0.5713639790213136 0.9034934351018222 0.061962108721129686 0.014951816815350915 1.746566985318575e-11 10.757814753400881 -0.15602923654625422 SSVLPS(ph)PSGR ddPTM_A549_PD325901_60min_R1 2 SSVLPSPSGR 10 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 SSVLPS(0.901)PS(0.099)GR;SSVLPS(0.969)PS(0.031)GR 122.51 3.5811e-05 48161000.0 9501.3 9052.2 9436.599999999999 8901.9 10397.2 9815.7 10062.1 9305.1 10352.7 10587.1 10417.599999999999 True False 10465.864981512617 9815.060662698665 10077.02442288561 9451.750145318254 9666.936540392786 9735.764193584964 10445.018721692399 9119.502480790266 9917.612021484032 9918.628699194214 9136.301242607406 1.1455253831501038 1.0742925831873673 1.1029654293677527 1.0345269813608753 1.0580798819669766 1.0656133083902648 1.1432436873886942 0.998161316995679 1.0855171866742923 1.085628465591568 1.0 13.15739450476421 -14.99999999959346 0.2068847723595721 0.6202100276992336 1.0913934374947947 0.0 0.04717817011044985 37.26696716306007 0.4458474008651839 5.755745557557793 0.03013584730706485 1.0000000009360942e-15 14.99999999959346 0.47118340979556106 SSVQGAS(ph)S(ph)REGSPAR ddPTM_A549_PD325901_60min_R1 1 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 SSVQGAS(0.886)S(0.886)REGS(0.228)PAR 55.841 0.0038759999999999997 8236600.0 943.34 1182.3 1313.8 1269.6 1431.9 1405.4 949.19 1466.3 1385.0 1100.1 1310.5 True False 1039.107182349796 1281.936570282211 1402.962368521197 1348.020308529195 1331.3282837868294 1393.9548883588852 985.3119448666985 1437.0534962099023 1326.7932664672387 1030.6394982557592 1149.3168079439602 0.9041085757796227 1.1153900834144221 1.2206924660146485 1.1728883622094592 1.1583649300043508 1.2128552186168442 0.8573023017294475 1.250354546524627 1.1544190925396545 0.8967409952870127 1.0 10.166560814804692 -10.82150742081618 1.0635871271004622 0.9998435295748227 1.1231061209160103 0.18654387025371755 0.12407648533426315 0.8696695900418446 1.7437255212211753 0.07967865915127398 0.01964387434723964 1.5083168376189068e-11 10.82150742081618 0.12326259134118756 SSVQGAS(ph)SREGS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 S(0.001)S(0.001)VQGAS(0.542)S(0.481)REGS(0.975)PAR 47.498999999999995 0.008373700000000001 773740000.0 1673.2 1672.9 1378.6 1599.5 2382.4 1485.9 1725.9 1644.0 2603.6 2517.5 2654.8 True False 1955.5952541875286 1758.0434644663742 1574.1062098528396 1991.3775718042837 2031.9521159461954 1643.1369517394078 2039.4736895885437 1877.0420345388454 2013.8887570948532 1948.7950015203162 1995.5398912474343 0.9799830425665227 0.8809863797648272 0.7888121990229161 0.9979141888060435 1.018246803713856 0.8234047131537243 1.0220159960388695 0.9406186480018124 1.0091949381357388 0.9765753168192005 1.0 10.962563403566204 -7.768648916511908 0.5910184290104219 1.0065556299712122 0.9022252898261655 0.14799021215085395 0.07181973783977837 0.8275600207746381 0.5906870814915487 0.01673771678916828 0.033611170102700906 1.7035350890012606e-08 7.768648916511908 -0.10433034014504672 SSVQGAS(ph)SREGS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 SSVQGAS(0.561)S(0.466)REGS(0.973)PAR 69.331 0.0072096999999999994 144500000.0 593.66 810.02 712.67 540.1 627.31 719.81 699.34 570.16 711.28 773.67 781.17 True False 653.9279261706065 878.283228165437 761.0360718328521 573.4607503439029 583.2499097020157 713.9481060122446 725.9537663935316 558.7877115181326 681.3873751428284 724.8203441646519 685.0910422446267 0.9545124455693982 1.2819949087172955 1.1108539229171641 0.8370577266125401 0.8513465710937635 1.0421215020898111 1.059645684484536 0.8156400785614203 0.9945939052280357 1.0579912733785812 1.0 9.420151911376506 -6.030475650191277 23.258713835912 0.9730480868901206 1.1377963180976858 0.2812194031023253 0.11001833856349738 235.9421337087208 180069.37026302895 0.014162530033167326 0.03754508082357866 9.322327368414782e-07 6.030475650191277 0.1647482312075652 SSVQGAS(ph)SREGSPAR ddPTM_A549_MK2206_60min_R1 3 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSVQGAS(0.5)S(0.5)REGS(0.001)PAR;S(0.019)S(0.019)VQGAS(0.467)S(0.467)REGS(0.029)PAR;S(0.001)S(0.001)VQGAS(0.444)S(0.444)REGS(0.111)PAR 73.809 0.00021271 130738900.0 2107.6000000000004 2901.7300000000005 2355.82 2129.1 1795.02 1586.61 1792.5800000000002 1139.06 2060.19 3346.1600000000003 3816.5499999999997 True False 2463.311354127202 3049.415662709077 2689.910700199854 2650.729595578932 1530.9749358486158 1754.5040170935183 2118.2685824686437 1300.52524322495 1593.5602544473986 2590.26013199095 2868.795303578572 0.8586570645366143 1.062960350954701 0.9376446959615504 0.9239870102521353 0.5336647525666464 0.6115821560725951 0.7383826165032716 0.45333497360465486 0.5554806411107726 0.9029086630056268 1.0 11.486229316188817 -6.585089435058711 12.135600631262676 0.7271698910031354 0.9585419534149793 0.363705938090361 0.16012249511402288 0.8763415984240588 168.80303641688135 0.029443182368759282 0.06130368938765997 2.5996241626702876e-07 6.585089435058711 0.23137206241184383 SSVQGAS(ph)SREGSPAR ddPTM_A549_PD325901_60min_R1 5 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSVQGAS(0.57)S(0.429)REGS(0.002)PAR;SSVQGAS(0.496)S(0.496)REGS(0.008)PAR;S(0.01)S(0.01)VQGAS(0.562)S(0.414)REGS(0.003)PAR;S(0.001)SVQGAS(0.565)S(0.431)REGS(0.003)PAR;S(0.001)S(0.001)VQGAS(0.558)S(0.437)REGS(0.004)PAR 77.39 0.00015717 318857900.0 5414.450000000001 4924.04 4612.82 4916.57 4919.4 5558.28 5152.09 5740.5599999999995 5499.32 5493.32 6119.58 True False 5964.120978092584 5339.0061317198815 4925.8737043400415 5220.255362559381 4573.878315008677 5513.0152105218585 5348.155604281827 5626.0600274178 5268.202704800443 5146.470837704146 5366.910455213811 1.111276408999632 0.9948006728029493 0.9178229719772363 0.972674205415155 0.852236748344716 1.0272232519113695 0.9965054660239835 1.0482865466764462 0.9816080869548558 0.958926160712163 1.0 12.389876102175585 SSVQGASS(ph)R ddPTM_A549_MK2206_60min_R1 4 SSVQGASSR 9 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSVQGAS(0.007)S(0.993)R;SSVQGAS(0.004)S(0.996)R;SSVQGAS(0.037)S(0.963)R;SSVQGAS(0.004)S(0.996)R 157.28 1.2097000000000001e-05 513734000.0 16103.6 13425.0 9699.0 6660.799999999999 24813.6 17433.899999999998 15158.300000000001 18313.4 21895.300000000003 16148.900000000001 19513.5 True False 18821.49398478024 14108.275157188762 11074.464042769981 8292.696299014675 21163.55231037716 19278.743726313773 17912.366897786676 20909.38053243533 16936.04950960937 12500.85227410186 14667.75940479765 1.2831880770163133 0.961856188653743 0.7550208410936748 0.5653689885520097 1.4428619754599201 1.3143618731575268 1.2212067571770882 1.4255333725746906 1.1546446217320545 0.8522673388011109 1.0 13.840360886384419 -6.765558989606377 24.99999716404955 1.153011462791054 0.8866556887050183 0.28030703195032236 0.23086291750550383 120.89435071940221 733658.2813917752 0.03351725023514773 0.06499791682533844 1.715698653367459e-07 6.765558989606377 -0.2663557740860356 SSVQGASS(ph)R ddPTM_A549_PD325901_60min_R1 4 SSVQGASSR 9 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSVQGAS(0.018)S(0.982)R;SSVQGAS(0.062)S(0.938)R;SSVQGAS(0.018)S(0.982)R;SSVQGAS(0.046)S(0.954)R 136.86 4.4179e-05 553115000.0 18595.6 17876.9 14941.900000000001 13117.199999999999 16065.6 12593.6 10276.5 11638.5 12956.800000000001 17039.199999999997 19619.0 True False 20483.41162264282 19383.449101986 15955.94718694388 13927.419652677354 14937.207679311183 12491.04189699477 10667.577831016572 11406.360987273383 12412.270754485718 15963.34200407193 17205.9873750878 1.1904816141095358 1.1265525586779694 0.9273485350829778 0.8094519279284479 0.8681401045858295 0.7259706533947767 0.619992192163406 0.6629297545451197 0.7213925294666433 0.9277783167029943 1.0 14.070623063851578 -5.815293123311016 2.0768232098602804 0.8196402238827212 1.192954038942499 0.6222792441626618 0.10867296047586825 0.23393740473049557 1.9002569241458107 0.020223544418832454 0.10798819608482695 1.5300544160804554e-06 5.815293123311016 0.3733138150597779 SSVQGASS(ph)REGS(ph)PAR ddPTM_A549_MK2206_60min_R1 3 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 SSVQGAS(0.24)S(0.787)REGS(0.971)PAR;SSVQGAS(0.071)S(0.928)REGS(1)PAR;S(0.001)S(0.002)VQGAS(0.467)S(0.535)REGS(0.995)PAR 143.75 4.9088e-13 931051000.0 4344.72 4757.719999999999 4708.13 3969.88 5610.62 4784.57 4131.910000000001 4119.38 6236.889999999999 7058.45 6838.86 True False 5078.002517794431 4999.867626134828 5375.813629620233 4942.500778214684 4785.30523034337 5290.870021659473 4882.624562690656 4703.314730072158 4824.244373266751 5463.941242693571 5140.582319066007 0.9878263205630474 0.9726267017630904 1.0457596622238248 0.9614671006985621 0.9308877736662357 1.0292355405021065 0.9498193511231974 0.914938121431874 0.9384626242388953 1.0629031700218576 1.0 12.327716080120867 SSVQGASS(ph)REGS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 SSVQGAS(0.183)S(0.817)REGS(1)PAR;SSVQGAS(0.132)S(0.868)REGS(1)PAR 100.67 2.1685e-06 2291900000.0 4606.9 4068.3999999999996 3885.7 4416.1 5323.7 3714.4 3951.7 4301.1 4683.799999999999 3975.6000000000004 4449.8 True False 5074.589096579467 4411.258346051043 4149.406968612281 4688.872467309218 4949.781677767962 3684.1511579053954 4102.084105953211 4215.311186352323 4486.956174353253 3724.5799375198603 3902.502809606287 1.3003422019551163 1.1303664753789333 1.0632681566296946 1.201503931212356 1.2683608236190693 0.9440483037799733 1.0511418712769767 1.0801558363971029 1.1497637268340442 0.9544080092271922 1.0 11.930183955533714 -7.251263819687674 24.924986977781508 1.0636058910529047 1.182592402052529 0.4588420860126238 0.0834816533917061 654.1570814494986 1602354.581248189 0.012713716703059657 0.02186267696898822 5.6070726124149875e-08 7.251263819687674 0.1189865109996242 SSVQGASS(ph)REGSPAR ddPTM_A549_MK2206_60min_R1 1 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSVQGAS(0.219)S(0.77)REGS(0.011)PAR 62.361999999999995 0.0013606 60282000.0 1966.1 1698.2 1891.1 1664.7 1414.2 776.73 1227.0 1126.1 1767.2 2443.2 2798.5 True False 2297.929613470058 1784.6311264013364 2159.286416257584 2072.551574731223 1206.1730533794125 858.9230530483549 1449.9300174547443 1285.7281235366145 1366.9320216385095 1891.2794231239072 2103.555215329194 1.0924028029901014 0.848388059127819 1.0264938141496172 0.9852613136217965 0.5733973820081796 0.4083197088382291 0.689275949064089 0.6112167221317295 0.6498198914282326 0.8990871308447841 1.0 11.038613971956398 -6.723969917643271 24.43575183102126 0.7548499887122899 0.9808946509781958 0.3942209534474115 0.16568409452001806 165.89093548270978 108184.90201946614 0.02974646464789456 0.0619208053073527 1.8881221294738937e-07 6.723969917643271 0.22604466226590592 SSVQGASS(ph)REGSPAR ddPTM_A549_PD325901_60min_R1 3 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSVQGAS(0.203)S(0.781)REGS(0.015)PAR;SSVQGAS(0.3)S(0.682)REGS(0.018)PAR;SSVQGAS(0.208)S(0.792)REGSPAR 102.29 5.5388e-06 86613400.0 1760.3100000000002 1854.0100000000002 1404.9899999999998 1745.38 2217.7200000000003 2639.81 2243.17 2386.0 2445.75 1937.2800000000002 2540.5 True False 1939.01537532827 2010.2539293486602 1500.3410702912133 1853.1881585544165 2061.9549979186595 2618.3122625862147 2328.5350618597245 2338.4093582192095 2342.963632824727 1814.9598101817267 2228.0346055563773 0.8702806367965122 0.9022543565236351 0.6733921755746488 0.8317591450028868 0.9254591435772404 1.1751667842395916 1.045107224121526 1.049539065680387 1.0515831428209124 0.8146012659118914 1.0 11.121555925273988 -6.953180199306438 3.8786926597412292 1.0387333184284904 0.81648763689346 0.48588025597765405 0.09654239878135024 0.09677375339153421 3.080670583532892 0.010228078568002359 0.019687592277220577 1.1138322816892318e-07 6.953180199306438 -0.22224568153503033 SSVQGASSREGS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSVQGAS(0.005)S(0.015)REGS(0.979)PAR;S(0.001)S(0.001)VQGAS(0.031)S(0.031)REGS(0.937)PAR 70.837 0.00048027 19778800.0 1251.49 1468.58 1250.53 994.4300000000001 1530.07 1122.59 836.76 1324.22 1509.0900000000001 1672.34 1901.0 True False 1462.7109160071416 1543.3244491876542 1427.8739580786828 1238.065394641659 1304.9987298714736 1241.3817286850674 988.7884608031223 1511.9322402536675 1167.2835245215372 1294.5572325094279 1428.929235069072 1.0236412553603025 1.080056598543211 0.9992614910770313 0.8664287665594671 0.9132703690595232 0.8687496190985701 0.6919786064530522 1.05808755475605 0.8168938642123258 0.9059631511051358 1.0 10.480718756209297 -6.078709456945107 4.116069383575169 0.9007533856435256 1.050484711487914 0.3400387335991053 0.09015856499239727 0.21618530265752525 6.7989047330725585 0.013621357502508633 0.039514307270232266 8.342391040246698e-07 6.078709456945107 0.1497313258443883 SSVQGASSREGS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSVQGAS(0.001)S(0.004)REGS(0.995)PAR;SSVQGASSREGS(1)PAR 96.37899999999999 4.81e-06 24732000.0 1859.8000000000002 1850.5700000000002 2034.31 2241.13 2337.1 2519.2 2198.3 2750.5 2028.1399999999999 2406.99 2710.3 True False 2048.6055268876016 2006.5240284759798 2172.3705098997975 2379.5595101244785 2172.9501585573007 2498.6844704380987 2281.957509455917 2695.6391197744933 1942.9043288468333 2255.012240620517 2376.950282007263 0.8618630109324861 0.8441590232932977 0.9139318253073834 1.0010977209481269 0.9141756876472442 1.051214444556255 0.9600358605434828 1.134074675511558 0.817393760211976 0.9486997930458296 1.0 11.214896011816345 -5.902707054265225 4.360808755919364 0.9459673905300366 0.8538584694631934 0.20394156423097765 0.08001973847196531 0.3373555927072147 11.413105659643914 0.013109012596054806 0.043973028712204 1.2511026550386382e-06 5.902707054265225 -0.09210892106684321 SSYLES(ph)PR ddPTM_A549_MK2206_60min_R1 2 SSYLESPR 8 0 H0YIQ2;P49750-3;P49750-1;P49750;F8VU51 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 SSYLES(1)PR;SSYLES(1)PR 108.15 0.001773 17748800.0 5597.7 5282.0 4789.799999999999 4856.6 8433.4 6750.6 6910.3 7626.5 9911.099999999999 8441.7 8083.200000000001 True False 6542.45490937457 5550.831238753896 5469.065663682819 6046.467218021057 7192.858031657423 7464.944011314386 8165.812061627964 8707.579730176705 7666.251674774463 6534.714106984725 6075.9183550291 1.0767845331495136 0.9135789710142198 0.900121651430029 0.9951528089603664 1.1838305933956175 1.2286116394463358 1.343963428157167 1.4331298120504454 1.261743694832408 1.0755105195868662 1.0 12.568886768460935 -6.711138828057227 4.60052754069082 1.178812576064669 0.9576579828950347 0.46862837622113795 0.1220137402933047 0.2013890632978524 8.98057454705344 0.022451035154315138 0.047049775743711386 1.9447383205578755e-07 6.711138828057227 -0.22115459316963437 SSYLES(ph)PRGPR ddPTM_A549_MK2206_60min_R1 2 SSYLESPRGPR 11 1 H0YIQ2;P49750-3;P49750-1;P49750;F8VU51 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 SSYLES(1)PRGPR;SSYLES(1)PRGPR 90.412 8.340299999999999e-05 22346000.0 2491.0 2865.1000000000004 2612.2 2032.0 3066.8 2614.5 2048.94 2097.86 2786.3999999999996 3793.8 4014.1000000000004 True False 2911.419900897163 3010.9213521684574 2982.649239357022 2529.840091219946 2615.6777825653935 2891.164654635359 2421.205876091053 2395.2380794268015 2155.2848489664693 2936.7779450914686 3017.2881864759397 0.9649127696673794 0.9978898819356998 0.9885198413349523 0.8384482803330391 0.8668969024203123 0.9581997064762026 0.802444356141836 0.7938380199023464 0.7143118972284008 0.9733170196518406 1.0 11.559036782056157 -6.256723138897508 23.922933489151287 0.8581870513629943 0.9851857543474821 0.28027726377241513 0.08110904407164353 263.1499876116443 1334802.7033622619 0.014983724994947507 0.03821542807193342 5.53702980298921e-07 6.256723138897508 0.1269987029844878 SSYLES(ph)PRGPR ddPTM_A549_PD325901_60min_R1 2 SSYLESPRGPR 11 1 H0YIQ2;P49750-3;P49750-1;P49750;F8VU51 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 SSYLES(1)PRGPR;SSYLES(1)PRGPR 110.92 2.0816999999999997e-05 39865000.0 6479.9 5875.0 6496.7 6840.4 7010.6 6700.2 6559.9 7055.700000000001 7074.200000000001 6521.1 7024.5 True False 7137.7346777497405 6370.106868314294 6937.605129830766 7262.915972324445 6518.199641257038 6645.6357926442315 6809.540584215017 6914.968528410425 6776.895975193168 6109.356633102112 6160.531031974321 1.1586232811268293 1.0340191186850995 1.1261375186365077 1.1789431681503653 1.0580580809391835 1.078743984593556 1.1053496117253876 1.122463062440629 1.100050619016412 0.9916931838170112 1.0 12.588838999896495 -10.578230632846545 0.6041702975803612 0.988367159293787 1.1074617243607097 0.5372681536806871 0.03958200899547914 0.665687032880043 0.3751555504291197 0.04225226574621569 0.008318948514949572 2.641005874050288e-11 10.578230632846545 0.11909456506692262 ST(ph)AGDTHLGGEDFDNR ddPTM_A549_PD325901_60min_R1 1 STAGDTHLGGEDFDNR 16 0 P11142;E9PKE3;P11142-2;E9PN89;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 1 S(0.375)T(0.443)AGDT(0.181)HLGGEDFDNR 58.848 0.005525100000000001 2544900.0 367.51 174.05 276.92 250.84 177.14 221.62 288.34 234.48 161.39 276.32 420.16 True False 404.8193446534373 188.71780432852816 295.7134564552365 266.33381710102657 164.69829749982472 219.81520019787683 299.3129364857021 229.8031124539984 154.6073395488431 258.8731080429337 368.4829836136854 1.0986106893821905 0.5121479490797284 0.8025159087543107 0.7227845760721716 0.4469631022975354 0.5965409801075898 0.8122842839318175 0.623646471270766 0.4195779626853331 0.7025374835607991 1.0 8.525454187594438 -11.06642548466984 1.39761330727813 0.998856602532923 0.6352321700276983 0.01710213865782728 0.2042516543531871 0.3905438290746622 1.3683515061249651 0.13140094699836885 0.029477441267836756 8.581723454904127e-12 11.06642548466984 -0.3636244325052247 ST(ph)ELLIR ddPTM_A549_MK2206_60min_R1 1 STELLIR 7 0 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 1 S(0.18)T(0.82)ELLIR 121.09 0.0069396 2415100.0 496.12 401.89 457.72 513.83 672.79 416.39 366.74 363.08 600.73 791.04 632.46 True False 579.8529270305502 422.34448438901956 522.6315786840579 639.7183730667053 573.8234822395235 460.45211342268766 433.37191084054814 414.54770188586605 464.66561416868626 612.3435145988599 475.40272699199636 1.2197088786163237 0.8883930621545003 1.0993449322238673 1.3456346309041582 1.207026063712891 0.968551687400059 0.9115890301736619 0.8719926881968542 0.977414700813252 1.2880521709947386 1.0 8.893006368626267 -7.274238953093608 23.936233861477955 0.971530128409024 1.1452052936929555 0.19004998836271603 0.14527124680107215 373.141314298993 697803.6896024299 0.017077377319306888 0.02741894338064126 5.3181556859927274e-08 7.274238953093608 0.17367516528393157 ST(ph)ENVNKLPELSSFGK ddPTM_A549_MK2206_60min_R1 1 STENVNKLPELSSFGK 16 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.462)T(0.538)ENVNKLPELSSFGK 91.637 3.7197e-06 14898000.0 2918.9 2180.3 2104.6 1839.5 3870.5 2742.7 2774.8 3233.1 3582.5 3368.1 3755.4 True False 3411.538959746582 2291.267957185746 2403.0639266330236 2290.177582578294 3301.1545772203467 3032.930693543085 3278.9452424070278 3691.401825953489 2771.069470076937 2607.243870752958 2822.8305362327146 1.2085525205843721 0.8116916434677727 0.8512958520847298 0.8113053735187068 1.1694483727762108 1.0744288949030447 1.161580619282599 1.3076951586615433 0.9816634170945108 0.9236274857053681 1.0 11.462926806338418 -6.754375148575895 24.99991748626722 1.0452520261523106 0.9079659958656995 0.19985079185428822 0.14514707473036856 240.4560365502258 850952.4876931882 0.02104186540475001 0.0430789945016922 1.7604546883852857e-07 6.754375148575895 -0.13728603028661113 ST(ph)ENVNKLPELSSFGKPSSSVQGTGLIR ddPTM_A549_PD325901_60min_R1 1 STENVNKLPELSSFGKPSSSVQGTGLIR 28 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.466)T(0.534)ENVNKLPELSSFGKPSSSVQGTGLIR 118.14 7.4494e-21 134550000.0 3116.1 3038.3 2964.5 3925.2 3996.3 3621.9 3347.9 3405.5 3849.8 4438.8 3235.5 True False 3432.4441780484212 3294.348203914779 3165.6887969866684 4167.650689224009 3715.6136744865616 3592.4044472371197 3475.306166541176 3337.574630936933 3688.006294040129 4158.533410469655 2837.55401152437 1.2096489314768917 1.1609816731365101 1.1156400139449754 1.4687476158330794 1.3094424491643375 1.2660215215805652 1.224754190555195 1.1762153662562165 1.299713161075262 1.4655345391066719 1.0 11.470432138357886 -10.83392185665612 0.8550888438654778 0.9840224019795454 1.2514310798666353 0.0 0.16435832288132257 0.4784069584501975 0.5574555692991308 0.0871920659315055 0.016909369159335972 1.4658115631937943e-11 10.83392185665612 0.2674086778870899 ST(ph)FHAGQLR ddPTM_A549_MK2206_60min_R1 2 STFHAGQLR 9 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.385)T(0.615)FHAGQLR;S(0.468)T(0.532)FHAGQLR 108.43 0.0003958 9488600.0 1157.18 819.73 933.6800000000001 956.5600000000001 1120.15 801.47 769.11 580.9300000000001 1267.74 1196.13 1131.41 True False 1352.4836936652666 861.4507556500811 1066.0898636409395 1190.91724294161 955.3774188537323 886.2810234272712 908.8473314789063 663.2786065235106 980.5989141647827 925.9234022516364 850.4496716725407 1.590315968968979 1.0129356084715808 1.2535602036794358 1.4003382946806098 1.1233791377387858 1.0421322424456494 1.0686668026945294 0.7799151773661934 1.1530357960351534 1.0887456754856109 1.0 9.732082051675345 -6.9431072318905604 5.685606393591177 1.048588086863775 1.2877358142166897 0.42414764768326263 0.15627949784718206 0.17129191793925516 11.522761976795941 0.02188281059501065 0.04164408573406978 1.1399682826106098e-07 6.9431072318905604 0.23914772735291479 ST(ph)PHLDGAGGGAAGEDGDLGLGSAR ddPTM_A549_MK2206_60min_R1 1 STPHLDGAGGGAAGEDGDLGLGSAR 25 0 Q9P244 Q9P244 LRFN1 Leucine-rich repeat and fibronectin type III domain-containing protein 1 1 S(0.452)T(0.548)PHLDGAGGGAAGEDGDLGLGSAR 149.98 1.8032e-32 5999400.0 2470.9 2346.1 2954.1 2463.2 3544.5 4233.1 2589.1 2782.1 4290.2 3846.5 4016.6 True False 2887.9275122949825 2465.506468996687 3373.0358004687914 3066.6841105772514 3023.108745370759 4681.043832295636 3059.5059561467633 3176.471194823919 3318.476550041613 2977.57297848973 3019.1673674794492 0.9565311096701365 0.8166180171240438 1.1172072925803942 1.0157383600556968 1.0013054519380953 1.550441980367456 1.0133608322287184 1.0521017248128894 1.099136333343468 0.98622322517203 1.0 11.559935019499651 -5.767037716088857 24.99870590106781 1.0777978266978019 0.8865745488580414 0.20372795084381312 0.1549610216314966 147.69547936866687 659530.7507041541 0.02063319260392298 0.06684298933514839 1.7098668161067247e-06 5.767037716088857 -0.19122327783976045 ST(ph)PKEDDSSASTSQSTR ddPTM_A549_MK2206_60min_R1 1 STPKEDDSSASTSQSTR 17 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.074)T(0.926)PKEDDSSASTSQSTR 77.75399999999999 0.0014678 1377600.0 386.97 393.64 394.27 228.12 547.86 258.45 222.0 285.96 408.23 463.05 516.35 True False 452.2810754918411 413.674594627619 450.18341459355815 284.0094102406958 467.27051974575346 285.7990074547748 262.3345263854551 326.4957057157715 315.7665568093532 358.446683397808 388.12604446497363 1.1652943211149467 1.0658253949380379 1.1598897343107437 0.7317453035964098 1.2039143634122245 0.7363561696787052 0.6759003424959013 0.8412105046077012 0.8135670391422276 0.9235316426443935 1.0 8.600381435471542 -6.241885599337717 24.58203242387176 0.886945857512393 1.1238854094041217 0.40406342679054574 0.14134150922800695 582.1952929854081 731905.1412366561 0.020168168532770876 0.05326926573826396 5.729469352211394e-07 6.241885599337717 0.23693955189172877 ST(ph)PKS(ph)TPVRPK ddPTM_A549_PD325901_60min_R1 1 STPKSTPVRPK 11 2 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 2 S(0.462)T(0.593)PKS(0.506)T(0.44)PVRPK 49.928999999999995 0.01356 5949100.0 1223.1 1429.5 1433.4 1510.7 1414.4 1748.0 1818.3 2051.3 1441.6 1644.4 2259.6 True False 1347.268211601369 1549.9689818306874 1530.679143734421 1604.0125079513682 1315.0574234151077 1733.7648675475539 1887.4964015119385 2010.3852122862804 1381.0145652990407 1540.57230336494 1981.6835247845645 0.6798604291509338 0.7821475843370045 0.7724135184001322 0.8094191064770273 0.6636061747337139 0.8748949294191853 0.9524711579348345 1.0144834869658799 0.6968895628524617 0.7774058188894822 1.0 10.952510866924296 -7.295580330854163 21.267318809817308 0.8757608179611359 0.7492400776703104 0.36001712263805774 0.09516557238474467 129.58981577001143 80724.5729627163 0.018396410664626953 0.029411537969389324 5.0631368871397615e-08 7.295580330854163 -0.1265207402908255 ST(ph)PLKER ddPTM_A549_PD325901_60min_R1 1 STPLKER 7 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 S(0.138)T(0.862)PLKER 66.62100000000001 0.0095572 51335000.0 3723.2 3658.7 3172.8 2971.7 3757.0 3722.2 3618.6 3687.0 3700.6 3651.4 4360.2 True False 4101.176523125023 3967.0314892087654 3388.125287596324 3155.2551597796223 3493.1212809463777 3691.8876372914756 3756.307803173898 3613.4598926044546 3545.07665118315 3420.8499808481797 3823.923041585086 1.0725049846779893 1.037424510396098 0.8860338586186306 0.8251356330831677 0.9134915224388028 0.9654712182076552 0.9823178349365628 0.9449614579865104 0.9270784512738652 0.8945917435174571 1.0 11.90083777329435 -10.91349752343573 1.1181213727213821 1.0005793586448195 0.9459278031544497 0.0 0.07153066665283625 1.1786623043542486 2.5716744676614325 0.05087861341421695 0.011548898530176198 1.2204007800598874e-11 10.91349752343573 -0.05465155549036982 ST(ph)PPPNNLVNPVQELETERR ddPTM_A549_MK2206_60min_R1 1 STPPPNNLVNPVQELETERR 20 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.45)T(0.55)PPPNNLVNPVQELETERR 119.87 1.5029e-14 16359000.0 1589.3 1829.0 1257.3 1397.7 2492.7 1819.0 1459.1 1591.5 2805.0 2739.0 3025.1 True False 1857.534985345589 1922.0882877093647 1435.6040458784091 1740.1365627451382 2126.027132059722 2011.4853726455212 1724.199583103681 1817.099998764339 2169.671978664566 2120.257997681884 2273.884181487348 0.8168995591193985 0.8452885610260618 0.6313444007246579 0.7652705344064246 0.9349759980603266 0.8846032656464535 0.7582618310735079 0.7991172169445208 0.954169960074828 0.9324388704331558 1.0 11.150943058219823 -8.81590948041266 4.096949569923176 0.9802885654985406 0.8037820586959724 0.4650656078175772 0.07498061111098821 0.1276208047223345 4.282110063625964 0.013789510867638879 0.014748777272961297 1.5278844805671984e-09 8.81590948041266 -0.17650650680256819 ST(ph)PPPNNLVNPVQELETERR ddPTM_A549_PD325901_60min_R1 1 STPPPNNLVNPVQELETERR 20 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.462)T(0.538)PPPNNLVNPVQELETERR 107.74 5.3496e-10 20876000.0 3190.6 3268.5 3240.2 3439.7 3752.8 4009.0 3573.9 4117.2 3596.6 4133.8 4094.9 True False 3514.507363204422 3543.9479658017485 3460.099456905449 3652.162456874509 3489.216274457166 3976.352033179714 3709.9067202131223 4035.079216119081 3445.447409513409 3872.7911625212805 3591.2532597098243 0.9786297732420008 0.986827636346678 0.9634796564542562 1.0169604293431553 0.9715873602128237 1.1072324187743323 1.0330395691761614 1.1235852568206561 0.9593997304973706 1.0783954465061047 1.0 11.810271681926343 -6.263495654610703 24.744318475610378 1.0046759793328142 0.9773638845832129 0.0 0.05600145929820701 464.449406746606 5589056.6280812165 0.008009665403046243 0.019577613592336056 5.451353500834828e-07 6.263495654610703 -0.02731209474960128 ST(ph)PQKLDVIK ddPTM_A549_MK2206_60min_R1 1 STPQKLDVIK 10 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.452)T(0.548)PQKLDVIK 56.951 0.0056083999999999995 3928500.0 1641.2 1711.5 1521.1 1339.9 2226.3 1803.0 1420.6 1779.2 1909.8 1942.1 2053.6 True False 1918.1944365124157 1798.608039592445 1736.8148526092812 1668.1755601503971 1898.814219161778 1993.7922632654636 1678.7046314557542 2031.40704857148 1477.2333493239166 1503.3782611529714 1543.6344435233277 1.2426481182514684 1.1651774467322347 1.125146474864231 1.0806804468179692 1.2300931915122058 1.2916220363123383 1.0875014084449492 1.3159897131699243 0.9569839255155181 0.9739211686165333 1.0 10.592115425248801 -8.781272700347815 24.995270685608734 0.9796868238015336 1.1865599226489532 0.6309106250888208 0.0732643806748105 106.33851338430415 134014.33715675454 0.012300829719815238 0.01310374389253238 1.6547306057702839e-09 8.781272700347815 0.20687309884741956 ST(ph)PQKLDVIK ddPTM_A549_PD325901_60min_R1 1 STPQKLDVIK 10 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.111)T(0.889)PQKLDVIK 63.727 0.0025342 8020900.0 2000.7 2032.5 2009.2 1978.6 2382.6 2155.6 2317.0 2188.7 2207.9 2052.9 2549.9 True False 2203.809591162505 2203.7859080593707 2145.556394301102 2100.8136282733662 2215.2543955237784 2138.045508286903 2405.1747029110484 2145.044661498067 2115.1096411790736 1923.2795436498932 2236.2784651478873 0.9854808448538921 0.9854702544450931 0.9594316753209955 0.9394239854357482 0.9905986352094489 0.9560730211411806 1.07552558431134 0.959202842994874 0.9458167549984431 0.8600358021704174 1.0 11.126884130837015 -5.604222129548106 24.77688500673965 0.9763095885773834 0.9855044828074779 0.0 0.04991466088235968 142.37961409861785 43352.47704639725 0.0050019776334161185 0.019372579475034218 2.487584662480482e-06 5.604222129548106 0.009194894230094564 ST(ph)PS(ph)SSPSLR ddPTM_A549_MK2206_60min_R1 1 STPSSSPSLR 10 0 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6;S4R3I2;M0R0J9 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 2 S(0.432)T(0.568)PS(0.491)S(0.282)S(0.217)PS(0.01)LR 77.37899999999999 0.002146 22572000.0 1017.7 1207.6 850.32 703.68 1252.1 970.88 761.18 787.48 1758.1 1165.2 1868.5 True False 1189.4628796238635 1269.0616819233633 970.9081621660147 876.0816315893958 1067.9177486468404 1073.6178771820153 899.4765531264884 899.1077015563567 1359.8931571087953 901.9805107334543 1404.4998820234412 0.8468942538537083 0.9035683791550383 0.6912839043939558 0.6237676790169883 0.7603544594879623 0.7644129351120135 0.6404247979221092 0.6401621766326004 0.9682401362324206 0.6422076087567803 1.0 10.45584078794149 -8.806625877358988 9.393511988435566 0.9852473161142646 0.7332760063114557 0.004106875650361497 0.13240036245500064 0.15845997156563105 31.32862310061829 0.015272728384541575 0.016266238249447274 1.5608965569421176e-09 8.806625877358988 -0.2519713098028089 ST(ph)PSLER ddPTM_A549_PD325901_60min_R1 1 STPSLER 7 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;Q6DN90-2;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 S(0.242)T(0.756)PS(0.001)LER 98.93299999999999 0.012136 5411400.0 1219.4 1568.1 1169.2 1263.6 1098.5 1345.8 905.19 1166.6 1029.7 1263.4 1359.1 True False 1343.1925903251656 1700.249290247428 1248.5489429707582 1341.649702156185 1021.3451496192695 1334.8402509985676 939.6375007889737 1143.3312478200041 986.4252898782058 1183.6287083868065 1191.939316044744 1.1268967910063836 1.4264562527305733 1.047493715631316 1.1256023558382406 0.8568768022590585 1.1198894381871864 0.7883266271533079 0.9592193431574707 0.8275801264375582 0.9930276587523643 1.0 10.219095071913586 -6.317255497665465 1.2448205330545552 0.9195251185390532 1.271507605120885 0.4925344341405996 0.12157907503165094 0.27509741939837096 0.7700215039879658 0.017304770401495122 0.07463373834688596 4.816643486556535e-07 6.317255497665465 0.35198248658183173 ST(ph)PVIVSATTK ddPTM_A549_MK2206_60min_R1 2 STPVIVSATTK 11 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(0.196)T(0.804)PVIVSATTK;S(0.134)T(0.866)PVIVSATTK 93.62299999999999 4.646e-05 4525000.0 2605.0 2776.9 3212.7 2407.9 4136.4 2651.2 2552.8 2519.3 4010.6 4176.6 4683.3 True False 3044.6603138647583 2918.2323489011155 3668.3091690078486 2997.835608094738 3527.9410394559472 2931.748224275869 3016.6107160215743 2876.418490032672 3102.2055036121587 3233.1031592253244 3520.30735749552 0.864884796886271 0.8289708972960976 1.0420422981525177 0.8515834850930493 1.0021684703025073 0.8328102993715939 0.8569168568757318 0.8170929972657458 0.8812314348083473 0.9184150220125882 1.0 11.781485680506592 -10.575120804952665 0.9583311200559537 0.9974092715808868 0.8880539571110541 0.09699664044735257 0.07201236914524695 0.5585597937869756 0.947245859679619 0.0394538171375706 0.012010207297244009 2.6599850456435888e-11 10.575120804952665 -0.10935531446983271 ST(ph)PVIVSATTK ddPTM_A549_PD325901_60min_R1 1 STPVIVSATTK 11 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 S(0.099)T(0.901)PVIVSATTK 144.57 2.5210000000000003e-11 15248000.0 4590.3 4872.0 4407.9 5056.4 5344.0 4982.5 5234.2 5264.6 4979.7 4970.2 5466.8 True False 5056.303876799741 5282.580538285488 4707.046600855977 5368.722344082411 4968.655875799159 4941.924171942612 5433.39034526414 5159.593423001198 4770.420526373222 4656.3807237803585 4794.418256900455 1.0546230232463265 1.1018188767078125 0.9817763800814151 1.1197859795305465 1.0363417644357433 1.0307661758191113 1.133274164690165 1.076166731088836 0.9949946522724225 0.9712087002585926 1.0 12.22714005740274 -8.764765449721937 24.996387680419712 0.9976363586677809 1.066914090242291 0.4093100609803447 0.04140144777561364 61.37434368558216 461243.41466409375 0.006525760643800182 0.007086474991761828 1.718836431914017e-09 8.764765449721937 0.06927773157451 ST(ph)PVRDR ddPTM_A549_MK2206_60min_R1 1 STPVRDR 7 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.052)T(0.948)PVRDR 82.426 0.057513999999999996 17548000.0 1620.8 1046.4 744.75 618.16 1127.8 1000.5 832.03 1189.1 1251.7 1509.7 1773.5 True False 1894.351415244529 1099.6572904642314 850.366748721821 769.6092277502567 961.9021139876266 1106.3722459218498 983.1990810292344 1357.6585664660215 968.191948554167 1168.6577214678132 1333.091003890057 1.4210218280047449 0.8248928897242207 0.6378909963688815 0.5773118455562903 0.7215577265023363 0.8299300218014934 0.7375333553074679 1.0184290213528369 0.7262759599524055 0.8766526201569019 1.0 10.380559554495933 -10.98507206076185 1.1793926828771142 1.0030495785426758 0.8093508543130136 0.014008286612212317 0.22050355864760787 1.0155928532030563 2.446034353777161 0.164134136638042 0.03522617042793399 1.034970423891599e-11 10.98507206076185 -0.19369872422966228 ST(ph)PVRDR ddPTM_A549_PD325901_60min_R1 1 STPVRDR 7 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.223)T(0.777)PVRDR 82.75 0.056949 25423000.0 1819.6 1848.3 1697.5 1472.9 1422.5 1579.1 1043.8 1214.5 1948.3 2043.1 2290.4 True False 2004.3244524812774 2004.062727609414 1812.7025578967352 1563.8776878013966 1322.5885073585894 1566.240333148937 1083.522380189276 1190.2758447431809 1866.4197263957565 1914.0983173223726 2008.695320041853 0.9978240266122169 0.9976937306587927 0.9024278295520527 0.7785539559920973 0.6584316168621491 0.7797301649093816 0.5394159927483178 0.5925616657076597 0.9291701472958418 0.9529062462705846 1.0 10.972043036588266 -8.969480262044359 18.985822130001843 0.9687538271384986 0.7786834926457471 0.24731197133819838 0.14106094320910587 14.088131252032165 8764.372904446245 0.027234945705347263 0.028622276489915863 1.0728024037971304e-09 8.969480262044359 -0.19007033449275146 ST(ph)PYKPIDDR ddPTM_A549_PD325901_60min_R1 1 STPYKPIDDR 10 1 Q8NB90-3;Q8NB90-2;Q8NB90 Q8NB90-3 SPATA5 Spermatogenesis-associated protein 5 1 S(0.44)T(0.52)PY(0.04)KPIDDR 60.628 0.0031348 26552000.0 3438.6 3449.6 2675.6 2755.3 3070.7 2920.1 2847.2 3121.6 3735.7 3683.3 3487.4 True False 3787.6841406364733 3740.309898372255 2857.182305689841 2925.4886232596814 2855.0246253399105 2896.3196737560706 2955.551754047623 3059.337239152172 3578.7015202466882 3450.735809404091 3058.471908450033 1.2384237141991568 1.2229342005850767 0.9341862182209151 0.9565196970346722 0.9334807416252434 0.9469825979941279 0.9663491581799201 1.0002829290992499 1.1700946182828589 1.128254864748079 1.0 11.578595309887353 -5.735797300960675 21.04332368934795 1.0346454401628746 1.2306813521712665 0.5251255715142957 0.07884934014605491 31.098968469474553 25518.289228677033 0.013614856450151694 0.05263860191555493 1.837395714235531e-06 5.735797300960675 0.19603591200839188 ST(ph)QGVTLTDLK ddPTM_A549_PD325901_60min_R1 1 STQGVTLTDLK 11 0 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(0.2)T(0.8)QGVTLTDLK 107.46 0.00014643 6289100.0 4088.7 3898.9 4170.2 3129.5 4542.2 4594.5 4167.9 4596.0 4095.5 4603.9 4868.5 True False 4503.781814058148 4227.473986190738 4453.214849449761 3322.802107389824 4223.1715417393225 4557.0839153016195 4326.511715262394 4504.329174507749 3923.3803774848907 4313.208968293512 4269.705363964265 1.054822623609923 0.990109065105533 1.042979425942195 0.7782274944388021 0.9891013973428513 1.067306412700696 1.0133045131820024 1.054950819914572 0.9188878489362965 1.0101889007837428 1.0 12.059920803076118 -10.817001366780218 0.0023434248105636277 9.4028938548062e-06 1.9440046710327188 0.0 0.08015752040040967 505284.56137778494 258.21869844972707 108383.71012878529 105830.40826820354 1.5240479574161165e-11 10.817001366780218 1.943995268138864 ST(ph)QGVTLTDLKEAEK ddPTM_A549_PD325901_60min_R1 1 STQGVTLTDLKEAEK 15 1 Q9BZL4-3;K7EL81;K7ER83;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(0.13)T(0.87)QGVTLTDLKEAEK 121.74 1.8709e-07 5204100.0 2873.0 2643.8 2959.8 3152.7 3418.2 3793.5 3300.6 3628.7 3963.2 3353.9 3391.8 True False 3164.664845009186 2866.602304416907 3160.669826723273 3347.4351186988 3178.117424149831 3762.606993730917 3426.206139157621 3556.3227318399177 3796.640486399248 3142.1341816198437 2974.6301023917026 1.0638851675926662 0.9636836197253777 1.0625421373171704 1.1253281932457249 1.0684076052328382 1.2648991182821874 1.1518091396986925 1.1955512481973858 1.2763403703023852 1.0563108936110954 1.0 11.538494563965486 -6.272301417087893 1.6544578805821715 1.1469379737827665 1.0120253900821161 0.2818879706843429 0.08217287472369303 0.5047597112809153 2.598091187454784 0.01597816935873021 0.057919887990924235 5.341934798715951e-07 6.272301417087893 -0.1349125837006504 ST(ph)QGVTLTDLQEAEK ddPTM_A549_MK2206_60min_R1 1 STQGVTLTDLQEAEK 15 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.129)T(0.871)QGVTLTDLQEAEK 156.22 1.9919e-19 21177000.0 2657.1 2566.0 2754.6 2383.6 4256.1 3179.3 2584.8 2692.5 4858.7 3618.2 3928.5 True False 3105.5535201420516 2696.5984397278457 3145.243700609772 2967.582107003872 3630.033328021578 3515.73141575146 3054.424701806865 3074.1701204354245 3758.2122077495633 2800.8461070509647 2952.9450289157558 1.0516800989290105 0.9131895153219178 1.0651209791618177 1.0049567729655606 1.2292925511567792 1.1905847827591782 1.0343655814440846 1.0410522682720509 1.2726996848734027 0.9484924641754547 1.0 11.527938784632498 -6.719849744796671 24.18852263830814 1.1280862013284105 1.0059391818004142 0.1337424323565366 0.10192621828243936 130.91748515379 76140.5926274271 0.015949204688044224 0.03320056821746778 1.9061200745348038e-07 6.719849744796671 -0.12214701952799634 ST(ph)QGVTLTDLQEAEK ddPTM_A549_PD325901_60min_R1 1 STQGVTLTDLQEAEK 15 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.13)T(0.87)QGVTLTDLQEAEK 327.7 2.9214999999999992e-164 39679000.0 5899.3 7258.3 6063.0 6996.2 6624.9 6921.3 8389.0 7850.3 7467.8 7378.1 7525.3 True False 6498.192593164876 7869.9824140060655 6474.4716397808 7428.339384476968 6159.589878664268 6864.9352275496985 8708.247985636941 7693.719608058784 7153.954335974044 6912.245506845575 6599.735806807086 0.9846140487112413 1.1924693115577178 0.9810198209908514 1.1255510223326282 0.933308553398631 1.0401833389253372 1.3194843309720212 1.165761756724162 1.083975865911985 1.0473518500113534 1.0 12.688192557945596 -10.246223401539668 1.0800888554519583 1.0083447262841403 1.0931726607374859 0.053801521220846915 0.10530214749825652 0.8487033262783946 1.9631657309272266 0.04161766668185652 0.01916919472639318 5.672527349404448e-11 10.246223401539668 0.08482793445334558 ST(ph)SADSASSSDTSR ddPTM_A549_PD325901_60min_R1 1 STSADSASSSDTSR 14 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.043)T(0.477)S(0.477)ADS(0.001)AS(0.001)S(0.001)S(0.001)DTSR 49.626999999999995 0.028998000000000003 2238700.0 240.7 0.0 117.32 176.37 285.92 202.12 182.25 120.87 0.0 192.12 134.21 True False 265.1356868060254 0.0 125.28204070247129 187.2639743346678 265.837965570452 200.47400173267238 189.18562348102668 118.45915302931934 0.0 179.98951041259568 117.7030208272865 2.2525818364090813 0.0 1.0643910396004703 1.5909869858773866 2.2585483677647815 1.7032188326486648 1.6073132375984758 1.0064240679357106 0.0 1.5291834410665324 1.0 6.879007537140205 -8.52118108968958 6.067482893379322 0.5253229353469631 1.4547932677242057 0.11312012362252633 0.6852842737171494 0.15088962734312714 22.881069121560355 0.11339202120967011 0.132148046643905 3.0117499396433253e-09 8.52118108968958 0.9294703323772426 ST(ph)SATDTHHVEMAR ddPTM_A549_MK2206_60min_R1 3 STSATDTHHVEMAR 14 0 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874 H3BQP2 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial 1 S(0.459)T(0.531)S(0.011)ATDTHHVEMAR;S(0.206)T(0.244)S(0.244)AT(0.244)DT(0.061)HHVEMAR;S(0.433)T(0.502)S(0.064)AT(0.001)DTHHVEMAR 73.464 0.00037421 14032600.0 1368.0900000000001 1248.6499999999999 1248.02 1258.23 1515.5949999999998 924.48 1174.67 1319.65 1859.22 2115.4300000000003 2232.28 True False 1598.9901454108401 1312.2009515846355 1425.0080023360963 1566.496406484091 1292.6529831965568 1022.3078599798422 1388.0923338252364 1506.7144287586286 1438.1096385642545 1637.5528937700585 1677.9432682062004 0.9529464885426282 0.7820293906524263 0.849258749885803 0.9335812695018877 0.7703794327793114 0.6092624699241095 0.8272582036156514 0.897953141389206 0.8570669019708043 0.9759286412112603 1.0 10.712478223287743 -10.104554640693863 0.6264284927828566 1.0000547909580422 0.8207167300033861 0.3249616828689671 0.08817996114711646 0.6934371483025598 0.5212403414750563 0.06075489950206981 0.020727014445177376 7.860412892619268e-11 10.104554640693863 -0.1793380609546561 ST(ph)SATDTHHVEMAR ddPTM_A549_PD325901_60min_R1 2 STSATDTHHVEMAR 14 0 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874 H3BQP2 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial 1 S(0.424)T(0.504)S(0.072)ATDTHHVEMAR;S(0.443)T(0.548)S(0.009)ATDTHHVEMAR 98.507 1.8544e-05 6227000.0 322.83 175.16 444.12 487.22 389.87 301.14 420.82 553.6600000000001 450.79 453.72 341.43 True False 355.60346394511475 189.92134792407342 474.2606539105146 517.314472843096 362.486876178484 298.68761568264875 436.8345353815399 542.6168169621327 431.8448639644523 425.0720417676603 299.4362745030955 1.187576436873678 0.6342629938181056 1.5838450257823116 1.7276279358656934 1.2105643405429716 0.9974997724584668 1.4588564331641256 1.8121278654785136 1.4421928828799533 1.4195743066635904 1.0 8.226105193655078 -5.761594183371464 24.99999999283548 1.3089618669816354 0.9109197687888219 0.2576073131981187 0.2878917965256095 4.878392415287518 788555.6791831002 0.04425468234940579 0.15173051788496245 1.7314335023122966e-06 5.761594183371464 -0.39804209819281355 ST(ph)SLSSPR ddPTM_A549_PD325901_60min_R1 1 STSLSSPR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 S(0.158)T(0.42)S(0.42)LS(0.003)SPR 63.397 0.010503 9096700.0 2923.8 2973.2 2624.3 3094.7 3831.3 3644.7 2874.2 3701.8 3272.1 3452.7 4059.5 True False 3220.6220236122 3223.761998446306 2802.4007791978825 3285.8525904263565 3562.202705267461 3615.018771596433 2983.57925382259 3627.9646949940775 3134.5850160342607 3234.695932758532 3560.207235290734 0.9046164480785336 0.905498412140339 0.7871454086770409 0.9229385744333017 1.0005604926468739 1.0153956027509794 0.8380352762186735 1.0190318864114691 0.8804501560927489 0.9085695632249845 1.0 11.797745505804468 -14.99999871349337 0.36076187064242055 2.1077365533376953 0.9124709534416905 0.0 0.07427168007470489 72.55992813507962 0.9325157396979136 60.04212992548168 0.01965172001271313 1.0000029622953742e-15 14.99999871349337 -1.195265599896005 ST(ph)SPFGIPEEASEMLEAKPK ddPTM_A549_PD325901_60min_R1 1 STSPFGIPEEASEMLEAKPK 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 S(0.318)T(0.356)S(0.318)PFGIPEEAS(0.008)EMLEAKPK 54.728 0.0024995 21527000.0 1693.4 1459.4 1364.0 1956.1 1955.5 1720.1 2105.6 1978.3 1847.7 1838.5 1989.1 True False 1865.3127213848086 1582.3887597647465 1456.5692423983198 2076.9238543745755 1818.152426108769 1706.092075897338 2185.7297602285316 1938.8412545536733 1770.0475945498329 1722.4167962396264 1744.4533099437865 1.0692821130563344 0.9070972268187204 0.8349717553892322 1.1905872415934724 1.042247686277919 0.9780095954258101 1.2529597368811005 1.1114320134003188 1.0146718083310988 0.9873676678082772 1.0 10.768559269174034 -6.244461676447239 24.9832973919863 1.0424009054129255 0.934115072198174 0.22962222531681709 0.09983198486522425 1093.7440335639837 1609480.624583767 0.014055986335118793 0.03708286777619456 5.69558481596982e-07 6.244461676447239 -0.10828583321475149 ST(ph)SPSAAGGQQK ddPTM_A549_MK2206_60min_R1 1 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 S(0.015)T(0.492)S(0.492)PSAAGGQQK 116.24 2.6011e-05 13390000.0 2610.6 3281.1 2799.8 2297.4 3798.8 3285.7 2581.7 3476.7 4652.6 4018.4 3730.0 True False 3051.2054569579022 3448.0939752887916 3196.8537402770803 2860.263103134207 3240.0015522399312 3633.3905931288596 3050.7614719339153 3969.532871947204 3598.793528675492 3110.6406490999943 2803.7380572370544 1.0882633807684283 1.2298202987930758 1.140211273312537 1.0201606015766165 1.1556006610092502 1.2959094319636217 1.088105026095159 1.4158001892156014 1.2835698111620046 1.109461934602185 1.0 11.453135854703346 -5.164408165676077 18.161625055654824 1.1602634788647863 1.0881940838793334 0.029686974799064125 0.11956972547008937 44028.11411354303 8217623.524990351 0.018987562208084768 368.2782284297429 6.848442824502817e-06 5.164408165676077 -0.07206939498545295 ST(ph)SRDRLDDIIVLTK ddPTM_A549_PD325901_60min_R1 1 STSRDRLDDIIVLTK 15 2 G5E9N8;Q7Z3D4-2;Q7Z3D4-3;Q7Z3D4 G5E9N8 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 1 S(0.067)T(0.508)S(0.426)RDRLDDIIVLTK 111.18 4.4502e-06 8652100.0 2024.0 1813.0 1837.9 2295.3 2056.7 2254.2 1902.0 2182.2 2049.5 2165.7 2093.6 True False 2229.4749900099514 1965.787872724054 1962.630946190522 2437.075467995483 1912.2444872298147 2235.8425425776286 1974.3816508143361 2138.6743090972163 1963.3666423282357 2028.9573323993266 1836.1004724238649 1.2142445489743743 1.0706319737116492 1.0689126089051229 1.3273105173695978 1.041470505535806 1.2177125250809713 1.0753124246016472 1.1647915466597092 1.0693132929356337 1.105036114783451 1.0 10.842429290636947 -9.21788409128368 0.6968312490627733 1.009367840852776 1.151016471329824 0.13698209556485164 0.08574366322512049 0.47728418168511977 0.5080026060767525 0.02504613243672634 0.01881078907720649 6.055024555488513e-10 9.21788409128368 0.14164863047704812 ST(ph)THLI ddPTM_A549_PD325901_60min_R1 1 STTHLI 6 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3 Q9H8V3-2 ECT2 Protein ECT2 1 S(0.097)T(0.689)T(0.214)HLI 85.359 0.042352 12933000.0 1197.6 1263.5 1254.0 1247.2 1299.4 1554.0 1417.1 1467.8 1714.6 1600.6 1421.8 True False 1319.1794703734772 1369.9795792536365 1339.1039809145843 1324.2367114032863 1208.1346266866447 1541.3447392270587 1471.0285159668745 1438.5235775331762 1642.5413246821142 1499.537842839895 1246.9276135327905 1.0579439063314855 1.0986841292031506 1.0739227894076706 1.0619996678487726 0.9688891428619198 1.2361140474386694 1.1797224634388856 1.1536544398576247 1.317270791708969 1.2025861217327685 1.0 10.284162001130042 -7.2658384240443965 24.820353446697524 1.1615150821226539 1.0566069728979481 0.3885224948311987 0.07850171925372945 501.805749873103 2831296.4183676764 0.01748586134960001 0.028546604758039856 5.422025752218389e-08 7.2658384240443965 -0.10490810922470573 ST(ph)VLGLPQHVQK ddPTM_A549_MK2206_60min_R1 2 STVLGLPQHVQK 12 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.45)T(0.55)VLGLPQHVQK;S(0.396)T(0.604)VLGLPQHVQK 118.73 1.6864e-05 11369700.0 1678.61 1896.35 1726.9 1538.06 2785.4 1737.8 1901.9099999999999 2041.22 2960.7 2904.5 2709.3 True False 1961.9183299257265 1992.8661150342577 1971.8003872006886 1914.884769046138 2375.6713497970677 1921.6928425417207 2247.462428278201 2330.569185974077 2290.106177266373 2248.371432737143 2036.5060371239542 0.9633746692430316 0.978571179611465 0.9682271258990983 0.9402794463356586 1.1665427484575974 0.9436224629393302 1.1035874126119307 1.144395913142203 1.1245270750586942 1.1040337675170335 1.0 10.991880375809641 -6.729310924198834 24.99904232168102 1.0674527042044344 0.9641539182751518 0.4562483766332627 0.0620259103065625 174.50655259487175 135782.1846817625 0.009666910919570653 0.02012193024653021 1.8650439728921874e-07 6.729310924198834 -0.10329878592928254 STADS(ph)GGEGLETAPK ddPTM_A549_MK2206_60min_R1 2 STADSGGEGLETAPK 15 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 STADS(1)GGEGLETAPK;S(0.001)T(0.007)ADS(0.992)GGEGLETAPK 247.38 1.3318999999999998e-65 19242800.0 5896.4 6257.700000000001 5987.5 5068.6 6789.1 5815.200000000001 5570.5 5743.8 8445.8 7656.0 8421.0 True False 6891.5681668607085 6576.190201202244 6836.617533362746 6310.407227538102 5790.432383466391 6430.5606041826495 6582.5877442800775 6558.001239649768 6532.839785171189 5926.504282677073 6329.8332922233885 1.0887440235317805 1.0389199679684331 1.0800628101473029 0.9969310305993125 0.9147843420426749 1.0159131066031408 1.0399306648987445 1.0360464386489765 1.0320713806471344 0.9362812587747246 1.0 12.627951788794427 -6.2615411237589305 24.999999662922264 1.0106210024272873 1.0662100388932187 0.34973338575363544 0.0409537952424467 8.272647542174017 2032890.85569193 0.005088799344544822 0.012530222264222558 5.475942462851088e-07 6.2615411237589305 0.055589036465931496 STADS(ph)GGEGLETAPK ddPTM_A549_PD325901_60min_R1 2 STADSGGEGLETAPK 15 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 STADS(1)GGEGLETAPK;STADS(1)GGEGLETAPK 264.85 1.6885999999999999e-90 21169000.0 11083.7 12567.2 11190.0 11032.4 12635.5 12519.3 11961.4 12777.7 10999.400000000001 12977.4 14391.1 True False 12208.909064611309 13626.28204859223 11949.420690936362 11713.846291601687 11748.026070108592 12417.346971560683 12416.597622529229 12522.83874958827 10537.133469443865 12158.00474926306 12621.085932699214 0.9673422025421742 1.0796441860275043 0.9467822939052594 0.9281171488780522 0.9308252976609038 0.9838572558474801 0.9837978830616952 0.9922156315522422 0.8348832680192627 0.9633089271473555 1.0 13.623548426345263 -5.890363712531179 7.793361298489431 0.9353570854402405 1.0229689366920696 0.17506773409127907 0.051680923684924794 0.2618216760009771 17.037493521039142 0.009200609462060576 0.028880149985932267 1.2871711213237456e-06 5.890363712531179 0.08761185125182902 STAGDTHLGGEDFDNR ddPTM_A549_PD325901_60min_R1 2 STAGDTHLGGEDFDNR 16 0 P11142;E9PKE3;P11142-2;E9PN89;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 118.71 1.3565e-07 40424000.0 5914.5 7542.6 6220.4 8438.1 8184.0 7513.6 6789.1 8176.7 9352.099999999999 8824.4 8376.099999999999 False True 6514.935685975223 8178.241372756999 6642.553750303892 8959.302272684474 7609.184073267279 7452.411732726143 7047.462915638072 8013.609304002943 8959.063759803797 8267.225878018478 7345.892800472651 0.8868813992978549 1.1133080205350658 0.9042541091637623 1.219634225006389 1.0358419704651403 1.0145004746389217 0.9593745929949621 1.0908965760414213 1.21960175613063 1.1254215250032706 1.0 12.842722127457094 -8.49664674020992 23.58635893873254 1.1064138932944163 1.0263997819464004 0.15826446548433792 0.09931463310235882 660.7637798347153 594122.71140226 0.018219348947616027 0.02197952843840883 3.1867886358230196e-09 8.49664674020992 -0.08001411134801595 STANQS(ph)FRK ddPTM_A549_MK2206_60min_R1 6 STANQSFRK 9 1 J3KRH6;Q13464 J3KRH6 ROCK1 Rho-associated protein kinase 1 1 STANQS(1)FRK;S(0.001)T(0.004)ANQS(0.996)FRK;STANQS(1)FRK;STANQS(1)FRK;STANQS(1)FRK;STANQS(1)FRK 115.33 8.6291e-05 150262400.0 22148.7 28381.399999999998 25690.1 21358.699999999997 32673.500000000004 22664.3 21745.8 24337.0 31642.800000000003 32780.0 33601.4 True False 25886.859076275003 29825.892033239263 29333.342479138573 26591.58245882846 27867.27143232375 25062.62118265525 25696.730377805517 27786.84427893667 24475.756323168305 25374.975233301284 25257.245028537567 1.0249280571584924 1.180884613485742 1.1613832960006334 1.0528298881680584 1.1033377314444697 0.992294335915797 1.0174003676478327 1.100153411329738 0.9690588302688485 1.00466124490738 1.0 14.624409663155296 -7.26605030406481 0.7025826685381947 0.9897046102303034 1.1274957108351482 0.37752028568901375 0.05358426082532872 0.4401682760147674 0.41919076521459003 0.010159080700358845 0.02816497423859164 5.4193811440496875e-08 7.26605030406481 0.13779110060484479 STANQS(ph)FRK ddPTM_A549_PD325901_60min_R1 4 STANQSFRK 9 1 J3KRH6;Q13464 J3KRH6 ROCK1 Rho-associated protein kinase 1 1 STANQS(1)FRK;STANQS(1)FRK;STANQS(1)FRK;STANQS(1)FRK 117.79 7.2814e-05 237694000.0 27699.799999999996 29455.899999999998 30702.1 30446.5 35278.700000000004 34201.2 34802.4 32750.699999999997 33448.4 33249.0 38094.4 True False 30511.863304484985 31938.252068490037 32785.7291327254 32327.111155981554 32800.84581690789 33922.6767665717 36126.82437660404 32097.46159607286 32042.680067944253 31149.652465690167 33409.030300297905 0.9132819189969998 0.9559766261221071 0.9813433325669753 0.9676159668631058 0.9817958055674368 1.015374479943203 1.081349085917106 0.9607420900147062 0.9591023678307278 0.932372241447918 1.0 15.02795048849429 -4.992356120201736 1.0248166603916329 0.9882973137214461 0.8366973056464979 0.27096837841484434 0.03649682383031515 2.9036032352338723 1.646029455442083 0.005267671677313416 0.5474247793769783 1.0177564884569877e-05 4.992356120201736 -0.15160000807494822 STAPETAIECTQAPAPAS(ph)EDEKVVVEPPEGEEKVEK ddPTM_A549_PD325901_60min_R1 2 STAPETAIECTQAPAPASEDEKVVVEPPEGEEKVEK 36 2 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y6G9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 STAPETAIECT(0.043)QAPAPAS(0.957)EDEKVVVEPPEGEEKVEK;STAPETAIECTQAPAPAS(1)EDEKVVVEPPEGEEKVEK 101.44 1.7119999999999997e-14 60385000.0 2313.34 2106.77 2485.5 2197.46 3007.6000000000004 2728.3999999999996 2286.91 2603.8900000000003 2386.72 2336.21 3215.1000000000004 True False 2548.1885738091014 2284.314901609959 2654.180976525676 2333.192113406245 2796.35655165673 2706.1808149981375 2373.9396114951696 2551.9533712378116 2286.4144584423752 2188.701301899907 2819.6630821981144 0.9037209409510797 0.8101375359460267 0.9413113904575315 0.8274719515735075 0.9917342853163806 0.95975325282072 0.8419231455286234 0.9050561350217753 0.8108821486076143 0.7762279528069251 1.0 11.461307071867461 -11.05989705310549 1.3843619942506658 0.999676403404958 0.8802660963149629 0.0 0.08795894661215346 0.3886212323940727 1.3345903827916676 0.04264171081859143 0.009575363945270528 8.711700711075374e-12 11.05989705310549 -0.11941030708999512 STAPSAAASASASAAAS(ph)SPAGGGAEALELLEHCGVCR ddPTM_A549_MK2206_60min_R1 2 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 Q13263;Q13263-2 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 STAPS(0.001)AAAS(0.078)AS(0.078)AS(0.078)AAAS(0.382)S(0.382)PAGGGAEALELLEHCGVCR;STAPSAAASAS(0.001)AS(0.002)AAAS(0.499)S(0.499)PAGGGAEALELLEHCGVCR 86.191 2.8374e-07 13153300.0 735.9200000000001 885.31 1152.6 1110.77 1165.61 1138.08 936.6199999999999 994.44 1405.1599999999999 1360.55 1492.25 True False 860.1253044834368 930.368497535254 1316.0560115163094 1382.9086998643595 994.1503130742296 1258.5108702036373 1106.791730194345 1135.4049153447747 1086.89350357943 1053.200810056987 1121.6831409951722 0.7668166463840423 0.8294396728739444 1.1732867896620849 1.232887122327099 0.8863022690991026 1.1219842968193938 0.9867240486581484 1.012233200132997 0.9689844340667576 0.938946812664558 1.0 10.131449478010548 -5.596943952103687 8.065127411137954 1.0152633250031722 0.7822628606244683 0.45155074912586834 0.09984283344564301 0.14940237312987484 14.030294365587286 0.013315887526936262 0.052097952877918664 2.5296244361908124e-06 5.596943952103687 -0.23300046437870392 STAPSAAASASASAAAS(ph)SPAGGGAEALELLEHCGVCR ddPTM_A549_PD325901_60min_R1 2 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 Q13263;Q13263-2 Q13263 TRIM28 Transcription intermediary factor 1-beta 1 STAPSAAASASASAAAS(0.5)S(0.5)PAGGGAEALELLEHCGVCR;STAPSAAASAS(0.001)AS(0.005)AAAS(0.497)S(0.497)PAGGGAEALELLEHCGVCR 131.08 1.0645e-29 44096000.0 1299.2 1509.1 1389.31 1418.19 1671.54 1577.53 1436.96 1267.83 1366.1999999999998 1316.01 1365.12 True False 1431.093827579511 1636.2771531869103 1483.5969311997123 1505.788375356822 1554.1367968999493 1564.6831187084053 1491.6442991346835 1242.5421360566056 1308.7833650884781 1232.9169040083289 1197.2188942086682 1.1953485152148624 1.366731815795848 1.239202737591552 1.2577385661392442 1.2981225107771082 1.3069315279580698 1.2459244557116878 1.0378571053858074 1.0931863600044094 1.0298174460596499 1.0 10.225471237042122 -8.215045309206959 4.156993037538717 1.0442933098433167 1.279349167148085 0.858224691348051 0.045554215868147875 0.062217480033964385 2.3366563394959714 0.007967180848602982 0.01024125679780912 6.094733086062436e-09 8.215045309206959 0.2350558573047683 STAQQELDGKPAS(ph)PTPVIVASHTANK ddPTM_A549_MK2206_60min_R1 4 STAQQELDGKPASPTPVIVASHTANK 26 1 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.916)PT(0.084)PVIVASHTANK;STAQQELDGKPAS(0.997)PT(0.003)PVIVASHTANK;STAQQELDGKPAS(0.994)PT(0.006)PVIVASHTANK;STAQQELDGKPAS(0.5)PT(0.5)PVIVASHTANK 329.28 2.7676999999999988e-232 300754400.0 24095.41 25217.899999999998 25084.3 22251.4 36235.3 29978.100000000002 27342.0 31061.0 39371.9 35426.1 35317.1 True False 28162.126131785048 26501.383395640245 28641.63092979225 27702.993998903297 30905.13537061167 33150.36264414773 32309.687479419415 35463.99187032302 30454.22751400478 27423.319405504997 26546.889367626467 1.0608446715466535 0.9982858265857047 1.078907232149025 1.0435495328762203 1.1641716263864805 1.2487475344126044 1.2170799761881177 1.335900089054156 1.147186289597577 1.0330144155777183 1.0 14.696255202657527 -6.739454042772895 23.33462220837596 1.1220918884800164 1.0444252534687426 0.19091135689354444 0.09515930145749384 231.9113454570511 246140.55610682815 0.016934506401548775 0.03522104194088471 1.8219898666348843e-07 6.739454042772895 -0.0776666350112738 STAQQELDGKPAS(ph)PTPVIVASHTANK ddPTM_A549_PD325901_60min_R1 7 STAQQELDGKPASPTPVIVASHTANK 26 1 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 S(0.001)T(0.001)AQQELDGKPAS(0.952)PT(0.047)PVIVASHTANK;STAQQELDGKPAS(0.973)PT(0.027)PVIVASHTANK;S(0.019)T(0.019)AQQELDGKPAS(0.919)PT(0.043)PVIVASHTANK;STAQQELDGKPAS(0.99)PT(0.01)PVIVASHTANK;STAQQELDGKPAS(0.95)PT(0.05)PVIVASHTANK;STAQQELDGKPAS(0.986)PT(0.014)PVIVASHTANK;STAQQELDGKPAS(0.956)PT(0.044)PVIVASHTANK 342.73 2.5470999999999986e-256 459504400.0 49070.0 53642.6 52835.399999999994 49801.6 59810.0 49352.99999999999 50277.100000000006 54757.2 53774.49999999999 53878.600000000006 62545.29999999999 True False 54051.550276575224 58163.250160721094 56421.127969070505 52877.731724360085 55609.15193329858 48951.085530935015 52190.422553184784 53665.024689807615 51514.54477086105 50476.696001020624 54852.62460732347 0.9853958796596709 1.0603549160518313 1.0285948643838936 0.9639963830882995 1.0137919986762876 0.8924109991338404 0.9514662776266999 0.978349259930266 0.9391445740225027 0.920223897441024 1.0 15.743273032399966 -6.259943043445636 24.006430386840886 0.9667975996714694 1.0283391961763078 0.37872759833545944 0.03695645624689908 62.51584597243216 1002946.7365728731 0.005062348479715004 0.012662372913148538 5.496129493927822e-07 6.259943043445636 0.06154159650483837 STAQQELDGKPAS(ph)PTPVIVASHTANKEEK ddPTM_A549_MK2206_60min_R1 7 STAQQELDGKPASPTPVIVASHTANKEEK 29 2 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.816)PT(0.184)PVIVASHTANKEEK;STAQQELDGKPAS(0.994)PT(0.006)PVIVASHTANKEEK;STAQQELDGKPAS(0.5)PT(0.5)PVIVASHTANKEEK;STAQQELDGKPAS(0.972)PT(0.028)PVIVASHTANKEEK;STAQQELDGKPAS(0.5)PT(0.5)PVIVASHTANKEEK;STAQQELDGKPAS(0.981)PT(0.019)PVIVASHTANKEEK;STAQQELDGKPAS(0.849)PT(0.151)PVIVASHTANKEEK 282.83 2.6221999999999987e-168 2417413000.0 51701.520000000004 56830.2 57245.100000000006 47695.3 69859.0 57835.399999999994 53716.25 55045.18 84380.1 79977.7 79274.7 True False 60427.472595195766 59722.6144385898 65363.315968117575 59380.650641123415 59582.83364165767 63955.50363996856 63475.79731059769 62848.002833793784 65268.14207733124 61910.68202307495 59588.60411958448 1.0140776661579085 1.0022489252934401 1.0969096681127855 0.9965101804022168 0.999903161384428 1.0732841385513987 1.0652338353691295 1.0546983565459636 1.0953124853595977 1.0389684896600437 1.0 15.862748831845096 -7.262374786040671 24.998182774557566 1.0503167897154335 1.023589866041199 0.18018906587854633 0.033939079797872265 174.9208484438724 4674624.693448767 0.006353132291009633 0.010457688325585003 5.465441044666548e-08 7.262374786040671 -0.02672692367423446 STAQQELDGKPAS(ph)PTPVIVASHTANKEEK ddPTM_A549_PD325901_60min_R1 9 STAQQELDGKPASPTPVIVASHTANKEEK 29 2 P35606;P35606-2;H0YAC7 P35606 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.68)PT(0.166)PVIVAS(0.076)HT(0.076)ANKEEK;STAQQELDGKPAS(0.595)PT(0.181)PVIVAS(0.112)HT(0.112)ANKEEK;S(0.002)T(0.002)AQQELDGKPAS(0.74)PT(0.233)PVIVAS(0.012)HT(0.012)ANKEEK;STAQQELDGKPAS(0.849)PT(0.151)PVIVASHTANKEEK;STAQQELDGKPAS(0.997)PT(0.003)PVIVASHTANKEEK;STAQQELDGKPAS(0.96)PT(0.04)PVIVASHTANKEEK;STAQQELDGKPAS(0.5)PT(0.5)PVIVAS(0.001)HTANKEEK;STAQQELDGKPAS(0.795)PT(0.205)PVIVASHTANKEEK;STAQQELDGKPAS(0.981)PT(0.019)PVIVASHTANKEEK 303.65 6.046399999999998e-204 4000534300.0 70470.4 70963.04 75867.4 73460.03 89347.1 86989.0 84160.98999999999 87417.2 87774.0 86133.5 89407.3 True False 77624.50313043328 76943.3444256106 81016.2179917376 77997.48921326721 83071.66792676185 86280.59042511096 87363.7825291107 85673.59536853325 84085.16402230717 80695.01611036497 78410.76889957115 0.989972477248056 0.981285421702215 1.0332282048592525 0.9947292994048653 1.0594420778242897 1.100366590405707 1.1141809187078193 1.0926253698425576 1.0723675485187987 1.0291318047616584 1.0 16.258764186582386 -6.760629285917766 24.999761433811937 1.0521083403209044 1.0008685533314088 0.43058610998231905 0.03453321906616831 25.856463986403263 797887.1345431731 0.006534006513470027 0.012982458375725228 1.7352846059283197e-07 6.760629285917766 -0.051239786989495606 STAS(ph)PASTK ddPTM_A549_MK2206_60min_R1 2 STASPASTK 9 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-17;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ST(0.001)AS(0.999)PASTK;ST(0.001)AS(0.998)PASTK 140.78 4.0697e-05 105769000.0 5933.700000000001 5037.8 3771.1 3406.3 6726.2 5248.8 4962.5 5093.9 6191.6 7586.0 7290.200000000001 True False 6935.163494963266 5294.202501816429 4305.898685605719 4240.843652914616 5736.784890143264 5804.224532128541 5864.122014359549 5815.97592441449 4789.212485953483 5872.317331294189 5479.842140715704 1.2655772405256709 0.9661231776149249 0.785770570581316 0.7738988722694725 1.046888713731086 1.0591955722597641 1.070126084616309 1.0613400486852136 0.8739690602342753 1.0716216234884506 1.0 12.41991861834298 -10.772180155407856 0.0038832567196161114 1.6704679544717912e-05 1.9123679020428144 0.0 0.1400964794681882 192305.88233511688 166.43519928594642 41775.847620313514 40194.609064989054 1.6897398430239867e-11 10.772180155407856 1.9123511973632696 STAS(ph)PASTK ddPTM_A549_PD325901_60min_R1 2 STASPASTK 9 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-17;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 S(0.016)T(0.003)AS(0.981)PASTK;STAS(0.971)PAS(0.028)TK 145.75 3.1386e-05 191688000.0 30651.0 28538.0 23776.7 21158.1 26723.0 21505.1 17244.6 22556.3 24693.8 29566.0 38556.0 True False 33762.6669559264 30942.99741411971 25390.329842912106 22464.987783468478 24846.06866934525 21329.969595593182 17900.85268960719 22106.396901424963 23656.005461002664 27699.197714234866 33813.856426621416 0.9984861392309362 0.9150981486323015 0.7508853625735062 0.6643722472832749 0.7347895595186863 0.6308055882913208 0.5293939994230877 0.6537673970846091 0.699595016981809 0.8191670705867041 1.0 15.045326942668844 -10.624294757212196 0.9523817740707711 0.9963164012971475 0.7248377593086086 0.1682285108664605 0.13375010279297664 0.47820343924761954 0.788336879817214 0.08540624616051579 0.024394817922722904 2.3752276639622835e-11 10.624294757212196 -0.2714786419885389 STCIYGGAPK ddPTM_A549_MK2206_60min_R1 1 STCIYGGAPK 10 0 P17844-2;P17844;J3KTA4;J3QRQ7;J3KRZ1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 P17844-2;A0A1X7SBZ2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 0 72.485 0.0019947 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STDDTWPRGS(ph)R ddPTM_A549_MK2206_60min_R1 2 STDDTWPRGSR 11 1 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 STDDTWPRGS(1)R;STDDTWPRGS(1)R 75.764 0.00035984 21573700.0 4346.6 4405.0 2806.6 2742.6000000000004 5413.6 3944.8999999999996 3274.3999999999996 3297.4 4941.3 5917.5 4882.1 True False 5080.199815832841 4629.195684723761 3204.6180825279125 3414.5371231199947 4617.266611352554 4362.346699587314 3869.31609547988 3764.8165478639844 3822.1034396346613 4580.732640117764 3669.7398308946417 1.384348768559526 1.2614506471962112 0.8732548437218947 0.930457547527986 1.2581999880429986 1.1887345971672936 1.0543843089106901 1.0259082990485906 1.0415189129914082 1.2482445217379436 1.0 11.841462070351023 -5.582341677743387 6.255827317760895 1.0368648688772286 1.35570583509855 0.39440367681411104 0.11973954119734366 0.09579450315301935 7.315126417028616 0.014355792350352262 0.057920100579524215 2.6161239835440053e-06 5.582341677743387 0.3188409662213214 STDEYS(ph)EADEEEEEEEGKPSR ddPTM_A549_MK2206_60min_R1 2 STDEYSEADEEEEEEEGKPSR 21 1 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 STDEYS(1)EADEEEEEEEGKPSR;ST(0.001)DEYS(0.998)EADEEEEEEEGKPSR 193.54 4.8728e-46 55682000.0 1963.96 2093.4 2383.0 1743.46 3023.8 2246.0 2348.5 1934.27 3023.3999999999996 3150.2 3760.7 True False 2295.4284337880345 2199.945118365657 2720.94523290245 2170.6077782668945 2579.0030256036403 2483.6702292258624 2775.1920505236058 2208.4586959534386 2338.6047273776985 2438.567632091082 2826.814399960156 0.8120195064169718 0.7782417969841476 0.9625482426227917 0.7678635634152313 0.912335463424833 0.8786110008711112 0.9817383308089566 0.7812535184427272 0.8272933403093818 0.8626557272827864 1.0 11.464961447970131 -10.790902284072907 0.9705475253595601 1.0025148810428917 0.8564821704679983 0.01988800104703392 0.0799736825548758 0.48467853986390563 0.7883498072419002 0.05018928524825942 0.011774573052695218 1.6184441453775045e-11 10.790902284072907 -0.1460327105748933 STDEYS(ph)EADEEEEEEEGKPSR ddPTM_A549_PD325901_60min_R1 2 STDEYSEADEEEEEEEGKPSR 21 1 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 STDEYS(1)EADEEEEEEEGKPSR;STDEYS(1)EADEEEEEEEGKPSR 202.73 2.6137e-56 78076000.0 3472.4 3547.1000000000004 3962.3999999999996 3751.1 3902.6000000000004 3760.6000000000004 3690.5 3988.5 3807.5 3783.8999999999996 3749.1 True False 3824.915491754227 3846.026565548535 4231.31229184685 3982.796927633797 3628.4948392391098 3729.9749204229565 3830.94399701909 3908.9462385822803 3647.484015937913 3544.9839082355857 3287.9844675030176 1.163300961290419 1.1697216345031305 1.2869015452071828 1.2113186564589944 1.1035620378081301 1.1344259552587237 1.1651344569545399 1.1888578785017307 1.1093373621402502 1.0781632161808052 1.0 11.682987768380801 -9.90347202134759 0.30584037011787973 0.9547142813478536 1.2066867017822498 0.5209703926418637 0.04955025903747997 0.9418738606483218 0.17510529482703452 0.08599884556924181 0.02795319049473332 1.2489009002261603e-10 9.90347202134759 0.25197242043439616 STDEYS(ph)EADEEEEEEEGKPSRK ddPTM_A549_MK2206_60min_R1 1 STDEYSEADEEEEEEEGKPSRK 22 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 S(0.092)T(0.092)DEY(0.12)S(0.696)EADEEEEEEEGKPSRK 56.303000000000004 0.0010463 5334400.0 1116.1 1237.1 1039.4 1239.4 2083.2 1221.7 1330.1 723.59 1677.9 1788.9 1985.8 True False 1304.4703939748383 1300.0631059186755 1186.802549340667 1543.05305563878 1776.7640395983528 1350.9794831011736 1571.7619529067267 826.161098401437 1297.858329055713 1384.7862475549928 1492.6710547081339 0.8739168551974802 0.87096423677411 0.7950864630202974 1.03375291613764 1.190325245467943 0.9050751529213075 1.0529861538810759 0.5534783405865524 0.8694871686310598 0.9277236556488087 1.0 10.543680553263437 -5.1824676352013315 0.0070549810547736605 1.79601016636694 4.4953270419660624e-07 0.0 0.15595762304414176 59546.099373723075 60.261574679414245 7252.472241190585 8107.654351022244 6.569500723471775e-06 5.1824676352013315 -1.796009716834236 STDEYS(ph)EADEEEEEEEGKPSRK ddPTM_A549_PD325901_60min_R1 1 STDEYSEADEEEEEEEGKPSRK 22 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 STDEYS(1)EADEEEEEEEGKPSRK 150.91 4.919299999999999e-28 16256000.0 3572.2 4080.3 3196.2 3393.8 3790.5 3521.6 3499.9 3459.0 3776.9 3759.0 3759.1 True False 3934.847114285351 4424.161200814096 3413.1133523119565 3603.4273181209733 3524.268356515106 3492.921257182758 3633.090609718768 3390.0075314669925 3618.170027523546 3521.6560984850453 3296.7545308982403 1.1935517422988888 1.3419747085654814 1.035294960641796 1.0930226331225141 1.069011454594066 1.059502982234795 1.1020203584065111 1.028286303907299 1.0974945188102108 1.068219081972575 1.0 11.686830755765138 -5.77061176344369 24.999904915290053 1.0544693415359292 1.2677632323759331 0.7667599812790238 0.04375482170844259 57.954836944530115 157961.2650949956 0.006468434913832889 0.020522726440343517 1.6958531270495727e-06 5.77061176344369 0.21329389084000394 STDS(ph)PIIIEPLSKPDYR ddPTM_A549_MK2206_60min_R1 2 STDSPIIIEPLSKPDYR 17 1 A0A0D9SEJ8;Q86YH2 A0A0D9SEJ8 ZNF280B Zinc finger protein 280B 1 S(0.031)T(0.031)DS(0.939)PIIIEPLSKPDYR;S(0.025)T(0.025)DS(0.951)PIIIEPLSKPDYR 144.01 8.021599999999999e-17 18448000.0 2295.58 2374.9 1901.9700000000003 2045.39 2943.6000000000004 2993.3 2214.6000000000004 2416.08 3574.8999999999996 3005.3 3270.8999999999996 True False 2683.01778245745 2495.772265981944 2171.697945708551 2546.510641821047 2510.6003393633405 3310.049019208269 2616.9641537532802 2758.566738934681 2765.1908579422297 2326.4006427285017 2458.6452577524597 1.0912586002382862 1.0151005957904735 0.8832904783074651 1.0357373166346528 1.0211315892144501 1.3462897946628174 1.0643927364070187 1.1219864802522959 1.1246806952825699 0.9462124051418268 1.0 11.263647877342876 -7.021691120116676 24.99262560958723 1.0879211974249878 1.001963757948454 0.1530344357233192 0.10488144362949603 1214.4844247328483 1399334.1887909332 0.015237745817316193 0.026553558614382387 9.512811253856546e-08 7.021691120116676 -0.08595743947653389 STDS(ph)PVPGSEDDLVAGATLHSPEWSEER ddPTM_A549_MK2206_60min_R1 1 STDSPVPGSEDDLVAGATLHSPEWSEER 28 0 Q9H694;Q9H694-2 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.026)T(0.026)DS(0.899)PVPGS(0.049)EDDLVAGATLHSPEWSEER 112.13 6.107300000000001e-16 10700000.0 905.66 840.31 757.91 998.68 1309.3 1131.3 1065.3 1295.2 1702.6 1444.5 1334.7 True False 1058.5132667388702 883.0781897457937 865.3930346072576 1243.3566448324482 1116.7037044192227 1251.0134151038374 1258.8512205334462 1478.7985663836444 1316.9638184935077 1118.1864467511793 1003.2571541539668 1.055076719220109 0.8802112061592838 0.8625834672836517 1.2393199885835393 1.1130782370158365 1.2469519005411929 1.2547642599120246 1.4739975292084464 1.312688190700305 1.1145561655068694 1.0 9.970475728570326 -6.263628202656195 24.978028922953218 1.1910984860135532 0.9273825320545398 0.49634228967812444 0.12631438627137995 159.4476488119313 1819571.2466268197 0.022387174759717188 0.054460934912080136 5.44968998442283e-07 6.263628202656195 -0.26371595395901337 STDS(ph)PVPGSEDDLVAGATLHSPEWSEER ddPTM_A549_PD325901_60min_R1 1 STDSPVPGSEDDLVAGATLHSPEWSEER 28 0 Q9H694;Q9H694-2 Q9H694 BICC1 Protein bicaudal C homolog 1 1 S(0.037)T(0.037)DS(0.925)PVPGS(0.001)EDDLVAGATLHSPEWSEER 183.91 1.007e-66 24974000.0 1770.3 2412.8 2027.2 2520.3 2742.4 2279.4 2393.6 2579.3 2072.6 2564.7 2850.2 True False 1950.019552774021 2616.135123722336 2164.7779825438956 2675.973206983405 2549.7832847663967 2260.83732213266 2484.689757828177 2527.8538380782957 1985.4958296606492 2402.764404305559 2499.643468906431 0.780119075792491 1.046603308137728 0.8660347003370703 1.070541955390989 1.020058786976489 0.9044639166567838 0.9940176624129536 1.0112857571580824 0.7943116105791215 0.961242846907581 1.0 11.28750661862082 STDSEVSQS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 STDSEVSQSPAK 12 0 A0A0G2JNJ7;H7C148;H7C3F5;A0A2H2FJL5;B7Z6J7;O75175 A0A0G2JNJ7 CNOT3 CCR4-NOT transcription complex subunit 3 1 STDSEVSQS(1)PAK;STDSEVS(0.001)QS(0.999)PAK 190.03 1.4001e-19 492690000.0 4512.7 5016.9 5250.1 4533.8 5850.6 5206.0 4803.2 4921.8 6792.1 6933.5 7588.6 True False 5274.33343507773 5272.238781087541 5994.643125162047 5644.581203530017 4989.984490242958 5756.895464536883 5675.879266372147 5619.480222380344 5253.700194754936 5367.217534475114 5704.141185294664 0.9246498751950631 0.9242826588302947 1.050928252024389 0.9895584664141566 0.8748003122901639 1.0092484175143175 0.995045368267641 0.9851579825666698 0.9210326364815496 0.940933500789191 1.0 12.47779397556094 STDSEVSQS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 STDSEVSQSPAK 12 0 A0A0G2JNJ7;H7C148;H7C3F5;A0A2H2FJL5;B7Z6J7;O75175 A0A0G2JNJ7 CNOT3 CCR4-NOT transcription complex subunit 3 1 STDSEVSQS(1)PAK;STDSEVSQS(1)PAK 293.96 6.865799999999999e-110 612000000.0 19667.8 16585.7 16868.7 15561.0 21288.0 18898.3 19358.9 19521.8 20597.1 18210.3 20234.6 True False 21664.460577330894 17983.43514651922 18013.511421733525 16522.16762840486 19792.804319613115 18744.398510511393 20095.613533096555 19132.422384444173 19731.475515344668 17060.498550210763 17745.872477697725 1.2208168747159593 1.013386925276289 1.0150817574268134 0.9310428466771207 1.1153469261366489 1.0562680721428925 1.1324105680547343 1.0781336566285489 1.1118909786003683 0.9613784034372888 1.0 14.11519588594632 -5.252932483387121 24.257794476960385 1.0526145889709908 1.2208170052046488 0.3926755017872803 0.06274085036465281 592.7273829424386 1690130.4793073635 0.008531079938804939 0.13423239769315293 5.585570227961457e-06 5.252932483387121 0.16820241623365795 STDSSS(ph)VSGSLQQETK ddPTM_A549_MK2206_60min_R1 1 STDSSSVSGSLQQETK 16 0 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 STDS(0.01)S(0.118)S(0.872)VSGSLQQETK 140.74 3.4545999999999996e-14 3551200.0 1049.2 1164.7 706.5 1107.3 1625.4 996.75 1019.1 1531.5 1700.7 1427.1 1489.1 True False 1226.279309522803 1223.978255164078 806.6923235608822 1378.5885497085853 1386.30581315436 1102.225423410898 1204.2572785559325 1748.5948150220445 1315.4941654598315 1104.7171188360044 1119.31537293075 1.095561929353284 1.0935061598942262 0.7207015494200585 1.2316355006355086 1.2385301289345627 0.9847317834337388 1.0758873751575264 1.562200303247534 1.1752667722372279 0.9869578722424561 1.0 10.128400865086967 STEDLS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 STEDLSPQK 9 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 STEDLS(1)PQK 90.913 0.0010482999999999998 100840000.0 5043.4 5059.3 5485.0 5016.3 6674.1 4858.0 4614.8 4831.6 7013.1 7204.9 7089.0 True False 5894.602620708452 5316.796759982504 6262.855477326873 6245.293725190262 5692.348731126811 5372.070335520584 5453.249425061251 5516.49409615443 5424.644047619415 5577.308085979632 5328.605653553212 1.1062185877421467 0.9977838679875226 1.175327259045842 1.1720315090357243 1.0682623375086968 1.0081568584341365 1.023391442266876 1.0352603391613209 1.0180231753502276 1.0466730789621448 1.0 12.379542354255749 -7.08000215436581 4.101074681739284 1.012375279547328 1.1102702752253064 0.45526289778331486 0.04565978440251744 0.1441807394881727 4.5191826136716235 0.006643015106707317 0.011963542107903869 8.317596450567256e-08 7.08000215436581 0.09789499567797844 STEDLS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 STEDLSPQK 9 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 STEDLS(1)PQK;STEDLS(1)PQK 110.84 0.00034508 257010000.0 18914.4 19421.7 21067.8 20643.5 23538.0 20226.9 20845.2 22090.9 22750.1 21565.8 24192.0 True False 20834.575963954667 21058.434819462065 22497.587598973114 21918.602110209864 21884.772081691746 20062.178832607322 21638.475492931113 21650.279669524214 21793.992412603842 20204.131707557543 21216.53736572322 0.9819969962494617 0.9925481456499787 1.060379797662908 1.0330904488505688 1.0314959366106604 0.9455915678785152 1.0198872285300222 1.020443595310785 1.0272172144269658 0.9522822390518215 1.0 14.372901600697347 -11.175859141109987 1.599667507032771 1.000035677155106 1.0151091878592924 0.07153883807609318 0.03250847053960441 1.357076888608018 6.261472629533585 0.02117518148715575 0.004515562332474535 6.670230761178792e-12 11.175859141109987 0.015073510704186388 STEEPTAPAS(ph)PQPPNDSR ddPTM_A549_MK2206_60min_R1 2 STEEPTAPASPQPPNDSR 18 0 H0YD47;Q7L8C5 H0YD47 SYT13 Synaptotagmin-13 1 STEEPT(0.04)APAS(0.96)PQPPNDSR;STEEPT(0.011)APAS(0.989)PQPPNDSR 105.28 5.3606e-09 2726700.0 873.5699999999999 830.5799999999999 722.69 658.49 552.44 343.17 776.13 553.33 970.4399999999999 1003.67 1098.65 True False 1021.0072592640441 872.8529743059839 825.1783090080876 819.8200795607397 471.1768078128431 379.4840216221903 917.1427746105545 631.7662220020552 750.636889474239 776.9402499209116 825.8248838025443 1.2363483824352381 1.0569468072781931 0.9992170558103317 0.9927287196600868 0.5705529308384246 0.4595211758149509 1.1105777902786524 0.7650123342046342 0.9089540702841271 0.9408050849030591 1.0 9.689692080313103 -5.562336453930296 1.4534629344011727 0.8942339538747754 1.2633117416821547 0.278768943021408 0.186637905923954 0.846874751231096 2.370614381598674 0.02851286946375374 0.3825483238901162 2.739451059079764e-06 5.562336453930296 0.3690777878073792 STEEPTAPAS(ph)PQPPNDSR ddPTM_A549_PD325901_60min_R1 2 STEEPTAPASPQPPNDSR 18 0 H0YD47;Q7L8C5 H0YD47 SYT13 Synaptotagmin-13 1 S(0.001)T(0.002)EEPT(0.013)APAS(0.984)PQPPNDSR;S(0.001)T(0.001)EEPT(0.154)APAS(0.844)PQPPNDSR 85.619 5.7477e-05 3914200.0 602.53 556.3 790.5899999999999 699.29 815.38 684.49 701.24 660.6500000000001 861.79 785.19 832.21 True False 663.6984020408577 603.1813533350198 844.2441916038757 742.4835550971815 758.1105217082936 678.9157403819366 727.9260719332522 647.4728174801008 825.571963255452 735.6129693986362 729.8534458138447 0.9093584552454652 0.8264417422355588 1.156731116974417 1.017304993702199 1.0387160957539086 0.9302083100051567 0.9973592316489739 0.8871271639446973 1.1311475858483802 1.0078913425946345 1.0 9.511462990446853 -8.769124297079644 24.99830405177023 1.0619307971521132 0.9752167591104143 0.11820689479367241 0.08895600376242968 243.7334333283335 792838.6307637386 0.01622563381455988 0.017431279112445477 1.701671412503206e-09 8.769124297079644 -0.08671403804169897 STEGGQSLDSLIKVT(ph)PER ddPTM_A549_MK2206_60min_R1 1 STEGGQSLDSLIKVTPER 18 1 O95171-2;O95171;O95171-3 O95171-2 SCEL Sciellin 1 STEGGQSLDSLIKVT(1)PER 78.45100000000001 0.00014312 6656300.0 2703.6 3046.3 2540.8 2838.2 3810.6 2735.1 2578.0 2792.3 4230.7 4332.7 3886.7 True False 3159.901583326204 3201.3436582006784 2901.1236457232676 3533.5591274116387 3250.0657878712955 3024.526466587557 3046.3892298274914 3188.1170760601076 3272.4532050396365 3353.940060809166 2921.525122537065 1.0815931579537923 1.0957782404488168 0.9930168401919883 1.2094912688421726 1.1124551908863698 1.035256018596563 1.0427393577166963 1.091250953642847 1.1201181122131938 1.1480100016722055 1.0 11.512505979902185 -7.253063753522468 24.494606367299756 1.058413652498998 1.098627246639241 0.012625959622961536 0.06108208217420132 1011.3924689283945 2957821.39826457 0.009297997291068184 0.015929003729853928 5.5838821849630705e-08 7.253063753522468 0.04021359414024306 STEGGQSLDSLIKVT(ph)PER ddPTM_A549_PD325901_60min_R1 2 STEGGQSLDSLIKVTPER 18 1 O95171-2;O95171;O95171-3 O95171-2 SCEL Sciellin 1 STEGGQSLDSLIKVT(1)PER;STEGGQSLDSLIKVT(1)PER 155.17 6.258e-23 33422000.0 5370.700000000001 5630.799999999999 5361.1 5757.0 6683.6 6097.0 5332.7 5683.0 5740.8 6432.6 5959.9 True False 5915.929510299629 6105.327277294319 5724.936484913219 6112.596814904366 6214.166993168278 6047.348053453906 5535.638816665407 5569.648106772744 5499.534140169766 6026.444538205614 5226.870082918894 1.1318302189359062 1.1680656263575733 1.0952896081389085 1.1694564276391668 1.1888887411752997 1.1569730943220276 1.0590733515178714 1.065579977771789 1.0521658378580945 1.1529738529181512 1.0 12.351731585330091 -8.244048500258197 0.9173237547086424 1.0193213535841876 1.153379139660663 0.27683538059424007 0.04985317892309593 0.17886862128582018 0.2972396250893395 0.006589451870923924 0.008872007977455604 5.701006021869845e-09 8.244048500258197 0.13405778607647534 STELKTEIKEEEDQPSTSATQSS(ph)PAPGQSK ddPTM_A549_MK2206_60min_R1 2 STELKTEIKEEEDQPSTSATQSSPAPGQSK 30 2 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 STELKTEIKEEEDQPSTSAT(0.001)QS(0.187)S(0.812)PAPGQSK;STELKTEIKEEEDQPSTSATQS(0.11)S(0.89)PAPGQSK 135.75 2.1348999999999997e-28 69799000.0 1512.12 1812.6599999999999 2089.94 1836.4 2191.6 1802.1799999999998 1825.33 1938.47 2306.58 2428.7 2984.8 True False 1767.3288882154225 1904.9166515031482 2386.3249181922565 2286.3180824391275 1869.2185431949638 1992.8854914097337 2156.968833545776 2213.2540588153975 1784.1433128513784 1880.0549831945948 2243.5917837107672 0.7877230167478888 0.8490477926214053 1.0636181392344988 1.0190437044022749 0.8331366502436498 0.888256725612366 0.9613909487483849 0.9864780549137183 0.7952174391994392 0.8379666019658424 1.0 11.131594489490164 -6.777678814009623 24.96648372617766 0.906881302089553 0.9336403371287658 0.01948729972491603 0.09225310021160463 1212.6808919587847 1864373.4413096004 0.015369144801931951 0.029107005940447475 1.6684806947472967e-07 6.777678814009623 0.026759035039212842 STELLIR ddPTM_A549_MK2206_60min_R1 4 STELLIR 7 0 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 ;;; 157.99 0.0042228000000000005 241967000.0 25546.100000000002 29794.3 23756.300000000003 24136.9 33456.9 26289.5 25188.3 25757.6 40193.7 35971.0 36877.0 False True 29857.657137819773 31310.7026082554 27125.300560805903 30050.44158354663 28535.434330087428 29071.437440442267 29764.688067363742 29408.818679341708 31089.891126149727 27845.126117055537 27719.42314657662 1.0771384736232228 1.1295582322434552 0.9785665602552739 1.0840933241880213 1.0294382454929112 1.0487749794328827 1.0737845412572993 1.0609462730819392 1.1215922842892696 1.004534833564689 1.0 14.75860961421676 -11.11149108958873 1.4747002521134214 1.0002072476195154 1.0727483642442814 0.2762865665215044 0.03959005784418106 0.41529671488254755 1.6230575403970615 0.029148722362257143 0.006404062803930149 7.735865502720264e-12 11.11149108958873 0.07254111662476603 STELLIR ddPTM_A549_PD325901_60min_R1 3 STELLIR 7 0 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 ;; 132.29 0.015663 393624000.0 16469.0 20735.1 15632.9 16262.1 16741.3 16515.7 16749.2 16989.3 23868.3 16551.0 23306.2 False True 18140.92075616299 22482.519646839784 16693.842602264427 17266.572983091242 15565.44884234965 16381.201614962885 17386.599971513926 16650.435083651984 22865.1983552491 15505.967035388665 20439.6851501744 0.8875342561726399 1.0999445187954842 0.816736778458742 0.8447572874156488 0.7615307539224418 0.801440995524489 0.8506295397297535 0.814613090236858 1.1186668575006893 0.758620640262473 1.0 14.319085352939442 -8.758411404324896 24.999998082373324 1.0560371308232759 0.8602200422322174 0.0 0.1247650747914498 50.38308464946447 415979.4135621994 0.01632853286808094 0.018128574854059828 1.7441691300752538e-09 8.758411404324896 -0.1958170885910585 STELVLS(ph)PDMPR ddPTM_A549_MK2206_60min_R1 1 STELVLSPDMPR 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 S(0.001)T(0.001)ELVLS(0.999)PDMPR 60.49 0.001834 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STES(ph)DVKADGDSK ddPTM_A549_MK2206_60min_R1 2 STESDVKADGDSK 13 1 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2;Q9Y4W2-4 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 S(0.003)T(0.015)ES(0.981)DVKADGDSK;S(0.017)T(0.12)ES(0.863)DVKADGDSK 97.095 4.5842e-05 31255000.0 8481.8 9548.9 9081.3 9300.1 9906.400000000001 9393.2 8636.2 9612.2 11701.3 12442.0 12501.4 True False 9913.320479899461 10034.89822335044 10369.164894484697 11578.624917497358 8449.181682928725 10387.182189298472 10205.285751216512 10974.758786127912 9050.974233136429 9631.343558655719 9396.95735891241 1.0549500334272894 1.0678880237583481 1.1034598219869765 1.2321674426367144 0.8991401535854815 1.1053771760969946 1.0860202256358495 1.1679055642110643 0.9631813668444671 1.0249427757082465 1.0 13.197977986794228 -8.784022349587516 24.987482720634357 0.9826134092153174 1.0881592844211894 0.2159168837914417 0.07824591846689971 210.6536287418012 233081.97574919963 0.012821980214044178 0.013654503267400508 1.6442871030190792e-09 8.784022349587516 0.105545875205872 STETILHT(ph)PQKPTAK ddPTM_A549_PD325901_60min_R1 1 STETILHTPQKPTAK 15 1 Q14159-2;Q14159-3;Q14159 Q14159-2 SPIDR DNA repair-scaffolding protein 1 STET(0.001)ILHT(0.975)PQKPT(0.024)AK 67.645 0.0016375 3307400.0 1204.9 1294.5 1501.1 1596.3 2053.3 1839.4 1377.2 1358.4 1694.9 1857.6 2073.2 True False 1327.2205609995017 1403.5920580481454 1602.973672847593 1694.8998255396623 1909.0832915004528 1824.4205362511273 1429.6100996327564 1331.3056463558157 1623.6692471735187 1740.310818980001 1818.209543097611 0.729960177603275 0.7719638604783152 0.8816220764723689 0.9321806894996982 1.0499797994944102 1.0034159941449514 0.7862735651454049 0.7322069402890293 0.8930044687849005 0.9571563550453612 1.0 10.828302759973612 -14.999999997623368 0.01858962626255241 2.0942065411198314 8.931568065917676e-12 0.17249994149497894 0.09960414749029514 3563.424220602257 5.147650041718126 380.0731367916907 220.26674955267066 1.000000005472398e-15 14.999999997623368 -2.0942065411109 STETSDFENIES(ph)PLNER ddPTM_A549_MK2206_60min_R1 2 STETSDFENIESPLNER 17 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 STETSDFENIES(1)PLNER;STETSDFENIES(1)PLNER 297.7 4.872699999999998e-133 29916000.0 4130.1 4922.0 4581.6 3850.0 6078.5 4240.7 4298.9 4660.799999999999 5488.2 5725.9 5851.1 True False 4827.159908749647 5172.50877643822 5231.339773002884 4793.250172833065 5184.3607021402595 4689.448059251161 5079.95448413708 5321.482673101367 4245.131462854499 4432.415213189744 4398.110387855152 1.0975531496615598 1.1760752505715806 1.1894516762127194 1.089843080353109 1.1787700273408876 1.0662415550552125 1.15503114659531 1.2099475010440837 0.9652171247399597 1.007799900936848 1.0 12.102668099408085 -8.771819444855641 24.99945008557824 0.9835747396567998 1.1448050974522763 0.7107046442680294 0.04378909654792803 69.8715731631882 168278.7957642294 0.007237509006892931 0.007745793560825063 1.6911438677249546e-09 8.771819444855641 0.16123035779547656 STETSDFENIES(ph)PLNER ddPTM_A549_PD325901_60min_R1 4 STETSDFENIESPLNER 17 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 STETSDFENIES(1)PLNER;STETSDFENIES(1)PLNER;STETSDFENIES(1)PLNER;STET(0.001)S(0.002)DFENIES(0.996)PLNER 141.97 3.4647e-16 49196610.0 1653.52 1918.6499999999999 2299.17 1759.8 2136.91 1272.73 1627.59 1462.43 1996.52 2361.9500000000003 1863.3200000000002 True False 1821.3841331429119 2080.3413690027605 2455.205502232363 1868.4988492042214 1986.8208135392936 1262.365308852287 1689.5288281014216 1433.26068639586 1912.613207485322 2212.8160739070904 1634.1434525586733 1.1145803205288158 1.2730469688847996 1.5024418440058644 1.1434117649087687 1.2158178710861722 0.7724935695674259 1.033892603159183 0.8770715227917846 1.170407166207246 1.3541137226614688 1.0 10.674318920049517 -6.823021757795869 2.554148425452652 1.0424448996485447 1.2874338330448096 0.2704332709114776 0.17018170777550218 0.23754883856412118 3.1574626151211143 0.021693817929437316 0.0461102663949885 1.503066661801828e-07 6.823021757795869 0.24498893339626493 STETSDFENIES(ph)PLNERDSSASVDNR ddPTM_A549_MK2206_60min_R1 2 STETSDFENIESPLNERDSSASVDNR 26 1 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 STETSDFENIES(1)PLNERDSSASVDNR;STETSDFENIES(1)PLNERDSSASVDNR 129.03 2.8803e-24 7809500.0 868.9100000000001 1216.93 1092.49 1131.5900000000001 1398.1 1186.94 800.78 691.16 1730.21 1545.06 2140.91 True False 1015.5607651901063 1278.8665390717101 1247.4215096490127 1408.829600799005 1192.4413420518706 1312.5412029729944 946.2713605357861 789.1340465887275 1338.3201975776178 1196.0298729092267 1609.2629608899147 0.6310719813177742 0.7946908430456282 0.7751508236784339 0.8754502123257277 0.7409860110074592 0.8156163628144187 0.5880153732069385 0.4903698561186919 0.8316354940758304 0.7432159329932182 1.0 10.652184372920185 -9.534192833940432 1.403268910413566 0.9586081542273992 0.7267101350212124 0.10396477994950126 0.12752224053182343 0.25586529536324626 1.0295930496898715 0.02891870666708975 0.022471803716909836 2.9228542939800586e-10 9.534192833940432 -0.2318980192061868 STETSDFENIES(ph)PLNERDSSASVDNR ddPTM_A549_PD325901_60min_R1 2 STETSDFENIESPLNERDSSASVDNR 26 1 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 STETSDFENIES(1)PLNERDSSASVDNR;STETSDFENIES(1)PLNERDSSASVDNR 206.95 1.0622999999999997e-69 14622400.0 1068.5 879.76 1137.33 1130.52 1058.52 1566.1399999999999 1276.81 1329.6399999999999 1483.9299999999998 1307.57 1262.21 True False 1176.973333411874 953.9004627179886 1214.5160531208803 1200.3496528027936 984.173206895757 1553.3858750920624 1325.3997032472405 1303.119287117599 1421.5655826055802 1225.009807048707 1106.9661718084285 1.0632423676408072 0.8617250346138586 1.0971573333056328 1.0843598326422264 0.8890725226841691 1.4032821550041832 1.19732629325245 1.1771988343498512 1.2841996610277593 1.1066370755010815 1.0 10.112395419600052 -7.22403243713378 24.973342394966398 1.1629905351191847 1.0016618820484358 0.3872564751940114 0.11892068799498423 651.3616746035702 434857.5463301522 0.020684896672121433 0.03582682098707755 5.969906961249042e-08 7.22403243713378 -0.16132865307074895 STFAGS(ph)PER ddPTM_A549_MK2206_60min_R1 2 STFAGSPER 9 0 H0YE03;H7C3G7;Q2TBE0-3;Q2TBE0-2;Q2TBE0 H0YE03 CWF19L2 CWF19-like protein 2 1 STFAGS(1)PER;STFAGS(1)PER 79.97399999999999 0.0017101 17716000.0 5733.9 6259.2 6512.4 5581.6 7970.9 6413.299999999999 5598.9 5758.2 8559.0 9001.8 9118.5 True False 6701.642139604275 6577.766544795224 7435.9562462248905 6949.092250567546 6798.391168987385 7091.951149195999 6616.147656664523 6574.442483747921 6620.400165914445 6968.2871279783785 6854.124792202704 0.9777531548926722 0.9596800093686846 1.0848877824173966 1.0138555193031906 0.9918686010387903 1.034698282304963 0.9652797194750663 0.9591950370129019 0.9659001501469384 1.0166560048491597 1.0 12.742756743728544 -7.772072517342528 24.999359318232006 0.9799732277616273 1.0108419089468572 0.15253787977771616 0.03401306719320206 295.9298311026004 695754.7844124397 0.0052262301609349695 0.007258793796058307 1.6901586898576247e-08 7.772072517342528 0.030868681185229896 STFREES(ph)PLR ddPTM_A549_MK2206_60min_R1 9 STFREESPLR 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 ST(0.002)FREES(0.998)PLR;S(0.001)T(0.001)FREES(0.998)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(0.999)PLR;S(0.002)T(0.002)FREES(0.995)PLR 174.23 6.0448e-32 6529546700.0 17924.839999999997 22427.3 18182.850000000002 19400.0 25002.76 20880.23 19892.370000000003 18004.23 32743.4 26836.050000000003 26408.33 True False 20950.114771737248 23568.753775256566 20761.451543466355 24153.00087089909 21324.887124955898 23089.762079425076 23506.556137992033 20556.384738141907 25327.072180465355 20773.767666553827 19850.41282817023 1.0553994495271355 1.1873180663431615 1.0458952024414951 1.2167505572792394 1.074279276181763 1.1631880041637122 1.184184749278024 1.0355645958642137 1.27589649644581 1.046515649139208 1.0 14.276881390895552 -5.222684957082911 21.12170352041638 1.1313678152449156 1.0553979990434754 0.041597347233307214 0.08491260662336352 6848.770972505647 3732108.1545309415 0.013783964525376308 3.3796175728577733 5.988458481726658e-06 5.222684957082911 -0.07596981620144017 STFREES(ph)PLR ddPTM_A549_PD325901_60min_R1 9 STFREESPLR 10 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR 176.62 5.7228e-11 8717233500.0 46865.3 43141.49999999999 44898.49999999999 43054.100000000006 51466.600000000006 46014.1 44044.0 46165.6 53028.799999999996 49985.100000000006 52088.6 True False 51623.030755589636 46777.185610107415 47945.58220661359 45713.45397404445 47851.76356613117 45639.376425526214 45720.11852180159 45244.79089178741 50800.18394861945 46829.03225548947 45682.03241684076 1.1300510950243692 1.0239733903096422 1.0495501112804773 1.0006878318573258 1.0474963795282133 0.9990662413851179 1.0008337217708114 0.9904285886174329 1.1120386125791522 1.0251083364282598 1.0 15.479339217913726 -11.354495546791808 2.0153900381110974 0.9996506443770525 1.0491657404942125 0.003776046863518845 0.045042251927374835 0.6174279835392215 4.5318611490230625 0.03894712729291726 0.007379627765401713 4.420836499298622e-12 11.354495546791808 0.049515096117159985 STFREES(ph)PLRIK ddPTM_A549_MK2206_60min_R1 4 STFREESPLRIK 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 STFREES(1)PLRIK;S(0.072)T(0.054)FREES(0.874)PLRIK;STFREES(1)PLRIK;S(0.076)T(0.076)FREES(0.848)PLRIK 146.1 1.4404e-12 474998000.0 12667.7 17811.5 18149.5 16332.100000000002 18667.9 9657.630000000001 10334.19 6901.389999999999 23237.600000000002 26511.500000000004 28107.6 True False 14805.698064470098 18718.029270932417 20723.372011986154 20333.465233175837 15921.876639217602 10679.593996384045 12211.778555077946 7879.683167120461 17974.320702822002 20522.53373696358 21127.707189704066 0.7007716422577646 0.8859470222142263 0.9808623257560597 0.9624075651277826 0.7536017276392696 0.5054781335472319 0.5779982865830788 0.37295495892523445 0.8507463938908255 0.9713564066698446 1.0 14.366848591899338 -5.245961713946186 20.922731423109095 0.8372576191295461 0.7007706952141218 0.0 0.20958255294779513 1024.2974214369956 1384405.744249101 0.03233577051209919 0.8324329464884973 5.675946405851856e-06 5.245961713946186 -0.13648692391542427 STFREES(ph)PLRIK ddPTM_A549_PD325901_60min_R1 6 STFREESPLRIK 12 2 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 STFREES(1)PLRIK;STFREES(0.999)PLRIK;STFREES(1)PLRIK;S(0.003)T(0.002)FREES(0.995)PLRIK;STFREES(1)PLRIK;S(0.004)T(0.026)FREES(0.97)PLRIK 174.59 1.449e-16 1044025000.0 24153.800000000003 22544.6 28479.600000000002 30778.0 26400.9 47543.1 36321.1 43167.6 40979.1 34396.3 37167.7 True False 26605.875994912232 24444.512562280575 30412.396917747206 32679.08715809041 24546.591862160574 47155.92475646457 37703.319336168526 42306.58835367294 39256.89093565892 32224.511747890723 32596.308525462584 0.816223590905365 0.7499165908061571 0.9330012597589259 1.0025395094221532 0.7530482122841002 1.4466645730644239 1.1566745144382409 1.2978950766963435 1.2043354818841965 0.9885938992974793 1.0 14.992420970583753 -7.23121770777201 24.94587510192648 1.142423179685371 0.8583135932649222 0.5732180660734005 0.14003250663046454 472.02505493910127 389623.9080993856 0.02188957285005171 0.03791116693121815 5.871949234018127e-08 7.23121770777201 -0.2841095864204488 STFS(ph)PAPRPEMPGTVEVESTFLAR ddPTM_A549_PD325901_60min_R1 2 STFSPAPRPEMPGTVEVESTFLAR 24 1 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 S(0.04)T(0.04)FS(0.912)PAPRPEMPGT(0.004)VEVES(0.002)T(0.002)FLAR;S(0.045)T(0.045)FS(0.909)PAPRPEMPGT(0.001)VEVESTFLAR 55.413000000000004 0.00096998 11363900.0 3588.1 3789.5 3632.3999999999996 3982.3999999999996 4131.1 3502.9 3656.7 4318.7 3982.2 4404.3 5057.5 True False 3952.3612705803885 4108.854464251404 3878.916507395639 4228.3838033133825 3840.9457875213157 3474.373543782793 3795.8577195230173 4232.560140545389 3814.8419824735292 4126.211746357461 4435.45956213398 0.891082697342603 0.9263649925543588 0.8745241508930411 0.9533135730537536 0.8659634325858596 0.7833176010539952 0.8557980669982167 0.9542551524264212 0.8600781788298255 0.9302782921488897 1.0 12.11486787592192 -10.83940788494941 0.8638676753541141 1.0071734365761242 0.8835516981051627 0.2347262236899832 0.05035360693635434 0.5262588716651254 0.6273783701863903 0.04464449360937493 0.008678056573248709 1.4474118205558783e-11 10.83940788494941 -0.12362173847096158 STFS(ph)TNYR ddPTM_A549_MK2206_60min_R1 2 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.12)T(0.188)FS(0.346)T(0.346)NYR;S(0.011)T(0.011)FS(0.723)T(0.255)NYR 144.65 0.00090513 334340000.0 15960.1 15522.9 15401.3 12829.800000000001 19879.1 15479.1 14794.4 14004.6 22947.6 22395.6 23824.6 True False 18653.774693018393 16312.94930633337 17585.43592761246 15973.101575951607 16954.91072368453 17117.088087805 17482.35097818457 15989.794937288747 17750.005239787162 17336.418405580298 17908.29429449059 1.0416276606955888 0.9109158604430562 0.9819715735307377 0.8919387471125969 0.946763016335991 0.9558190080152412 0.9762153050814527 0.8928709051988238 0.991161131702413 0.9680664233284223 1.0 14.12834031150939 -8.962421826779167 24.999813413130628 0.9961005423568448 0.9481881600177456 0.12175588790500314 0.04170500089948931 161.08163978686238 107164.12717670204 0.006386424066662411 0.006782978986766983 1.0903807437933214e-09 8.962421826779167 -0.04791238233909911 STFS(ph)TNYR ddPTM_A549_PD325901_60min_R1 1 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.046)T(0.046)FS(0.787)T(0.121)NYR 132.01 0.0010743 489640000.0 13254.0 13274.0 14625.0 13750.0 14605.0 13400.0 13493.0 13895.0 13819.0 13959.0 15398.0 True False 14599.5363229209 14392.646565107047 15617.540447269372 14599.306271484284 13579.195184514734 13290.874842755842 14006.48349865291 13617.853324583375 13238.235486866979 13077.626357742165 13504.143615964216 1.0811153034289225 1.0657948385629183 1.156499878215658 1.081098267810585 1.005557669607556 0.9842071604632334 1.037198944040764 1.0084203568810342 0.9803091453512914 0.968415823294575 1.0 13.721114531786096 -6.737118942818275 3.9555902196896864 0.9954268661565638 1.1005087795430775 0.7620205933372072 0.026616363206004367 0.07323768221006205 2.494460537069076 0.0036800811706395988 0.007686154973493623 1.8318126642121383e-07 6.737118942818275 0.10508191338651363 STFST(ph)NYR ddPTM_A549_MK2206_60min_R1 2 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.001)T(0.013)FS(0.157)T(0.829)NYR;S(0.003)T(0.005)FS(0.206)T(0.785)NYR 161.28 0.00023248 316610000.0 17288.3 16940.5 16490.0 14964.0 24707.9 17941.8 16337.5 15789.8 26381.4 26046.3 28510.5 True False 20206.14238164611 17802.69909127421 18828.52995827168 18630.18067175949 21073.400640357224 19840.389367197047 19305.81227397464 18028.05250423446 20406.055022438984 20162.422740059028 21430.556000229764 0.9428659891712317 0.8307156889015546 0.8785833628427472 0.8693279199830257 0.9833342933394397 0.9257990957856778 0.9008544749733817 0.8412312076290123 0.952194381807929 0.9408259281673728 1.0 14.38738165972577 -9.059327935340866 2.9167890557037204 0.9816494670514877 0.8968836753765783 0.29927909440185907 0.044435354764695505 0.16928198415716 2.9776483023640794 0.008362561632304422 0.008277768099012683 8.723124373673382e-10 9.059327935340866 -0.08476579167490939 STFSTNY(ph)R ddPTM_A549_PD325901_60min_R1 1 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 STFSTNY(1)R 114.65 0.0013979 14668000.0 6734.6 6973.7 6318.5 6645.3 7432.3 7346.2 6778.7 7199.1 8097.4 8364.5 9180.6 True False 7418.291634249516 7561.39817320228 6747.311406227108 7055.76508842869 6910.280888043058 7286.374982824847 7036.667137946973 7055.508302915301 7757.094437467018 7836.364042505496 8051.44440061833 0.9213615924218281 0.9391356130611278 0.8380249642795685 0.8763353179072846 0.8582659885861432 0.9049773705529498 0.8739633273014435 0.8763034248082812 0.9634413468558874 0.9732867362163842 1.0 12.975031905489605 -8.876925769945935 3.1484641395720647 0.9850459808786965 0.8849783982818743 0.6915223028653404 0.02770360153366668 0.09701658117428773 1.8225623812862322 0.005324117060647045 0.005591992562965253 1.3276213567293635e-09 8.876925769945935 -0.10006758259682225 STFSTNYR ddPTM_A549_MK2206_60min_R1 4 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 183.89 4.3316e-09 232779000.0 28481.3 29741.0 28667.6 26446.5 38524.7 30575.899999999998 28142.6 26608.7 45173.5 43859.8 44592.8 False True 33288.247139069594 31254.689865918124 32733.09675147052 32925.893687228505 32857.76766336151 33811.42144336021 33255.74613628513 30380.564710726143 34941.774377256246 33951.84071804598 33519.177061329865 0.9931105133685788 0.9324420408273025 0.9765483410162171 0.9823001807885727 0.9802677316105293 1.0087187218676528 0.9921408892419186 0.906363681158967 1.042441296017604 1.01290794388909 1.0 15.032699109012952 -8.820856276544818 24.99999975945967 1.0200417260246575 0.9729349617455789 0.3413804421666349 0.028977602813121194 61.31586391528937 25798.58365041913 0.005223461097933382 0.00556079874074053 1.5105799759728074e-09 8.820856276544818 -0.04710676427907856 STFSTNYR ddPTM_A549_PD325901_60min_R1 5 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;;; 193.16 4.862500000000001e-10 352533000.0 37035.1 35534.6 38267.1 37186.9 39278.8 39754.2 37038.1 38312.5 43973.1 42443.3 44721.8 False True 40794.87608820036 38529.225450689526 40864.13552476593 39483.85035542245 36519.992592503775 39430.45497566301 38447.60516352599 37548.32713192518 42125.06352757438 39763.422794581136 39221.302114847946 1.0401203909228887 0.982354571958578 1.0418862536768267 1.0066940215244693 0.9311264701402777 1.005332634296603 0.9802735526460489 0.9573452462637789 1.07403531387672 1.0138220979544674 1.0 15.259349812158813 -8.758425833347337 24.999974401062296 1.034961119252405 0.9927689006966195 0.1691380894322928 0.035060452373987666 95.76405597370353 794443.683346272 0.006705789977496755 0.007444216259511937 1.7441111826720456e-09 8.758425833347337 -0.04219221855578559 STFSTNYRS(ph)LGSVQAPSYGAR ddPTM_A549_MK2206_60min_R1 2 STFSTNYRSLGSVQAPSYGAR 21 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 STFSTNYRS(1)LGSVQAPSYGAR;STFSTNYRS(1)LGSVQAPSYGAR 179.81 1.4154e-36 40462000.0 5585.200000000001 7467.200000000001 6775.1 7117.3 4814.1 4138.1 3970.2 4348.3 6240.9 12036.3 12064.8 True False 6527.84521497023 7847.248585010044 7735.911056415184 8861.038819507743 4105.9522671997065 4575.990995351533 4691.533948898796 4964.684841110257 4827.346114669409 9317.291470426597 9068.777188459411 0.7198153708393369 0.8653039348012829 0.8530269181449972 0.9770930121410384 0.4527569904821114 0.5045874322697848 0.5173281746153238 0.5474480999961198 0.5323039715665867 1.0274032845666818 1.0 13.146692319089906 -4.970317324491367 20.68488473298561 0.7298706730863629 0.6784759663595551 2.1641698378149776e-05 0.21344649408617394 388181.26862644014 120468.39113971611 0.032046115819554626 764652.4236138711 1.0707366677818032e-05 4.970317324491367 -0.05139470672680779 STFSTNYRS(ph)LGSVQAPSYGAR ddPTM_A549_PD325901_60min_R1 2 STFSTNYRSLGSVQAPSYGAR 21 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 STFSTNYRS(1)LGSVQAPSYGAR;STFSTNYRS(1)LGSVQAPSYGAR 249.19 1.6798999999999997e-98 99568000.0 10242.6 11008.4 11448.599999999999 12516.3 12074.0 16794.8 13730.6 15095.3 14266.6 13083.0 13548.0 True False 11282.421211796405 11936.116501983162 12225.57084202449 13289.403424420265 11225.963893038743 16658.028717098197 14253.125496672623 14794.212399466245 13667.024415437918 12256.937147241251 11881.68188784798 0.949564322483295 1.0045813896255593 1.0289427841464283 1.118478305500843 0.9448126956268813 1.4019924850988679 1.1995882090775416 1.2451277974877497 1.1502600847625706 1.0315826717913619 1.0 13.536451447970432 -5.950199251582361 1.231098179662484 1.113431222530757 0.9531187371409598 0.21463987056287015 0.11965668489008745 0.9425344776089974 2.2735989201903384 0.019536211908410112 0.13920497007035604 1.1215037973474215e-06 5.950199251582361 -0.16031248538979714 STGDGT(ph)LGR ddPTM_A549_MK2206_60min_R1 2 STGDGTLGR 9 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 S(0.008)T(0.034)GDGT(0.958)LGR;STGDGT(1)LGR 73.885 0.002328 5679900.0 1708.02 1781.01 1911.5300000000002 1323.46 1911.1599999999999 1421.77 1245.3 1197.3000000000002 2250.9 2745.4 2307.6000000000004 True False 1996.2920189202619 1871.6558016912297 2182.613697461193 1647.7077594123775 1630.0308956983424 1572.2207577054555 1471.5548905757073 1367.020941577469 1741.0747439486895 2125.2122332368904 1734.559233479954 1.150892964845719 1.079038274141971 1.2583102700288484 0.9499287932108661 0.9397378101802255 0.9064093790277733 0.8483739627752032 0.7881085380029875 1.003756291709718 1.2252174455715703 1.0 10.760353392734437 -6.280098538190063 24.26463466697679 0.9615699635944904 1.1543762781186828 0.4022908712288541 0.11111576049058396 339.6817457274546 441726.5418236458 0.012549571344113332 0.02921390689228356 5.246883988452425e-07 6.280098538190063 0.1928063145241924 STGDGT(ph)LGR ddPTM_A549_PD325901_60min_R1 1 STGDGTLGR 9 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 S(0.029)T(0.153)GDGT(0.818)LGR 61.343999999999994 0.008134 3834000.0 1272.5 1694.0 1586.4 1757.5 1905.5 1838.5 1558.2 1524.2 1676.0 1536.5 2058.9 True False 1401.6832632350108 1836.7593250935167 1694.062643798162 1866.0567834279002 1771.6642536181319 1823.5278655527316 1617.4981536797563 1493.7986352882308 1605.563548446998 1439.485127779269 1805.6683524424416 0.776268389119752 1.0172185399434064 0.9381914688301892 1.0334438109322646 0.9811681371175864 1.0098908047461386 0.8957891694185389 0.827282946653875 0.8891796471235865 0.7972034985450933 1.0 10.818317221653652 -6.659060015029532 0.003909187140160526 1.8682753288686162 5.630568370377795e-06 0.0 0.09203334852558848 102076.35911934951 97.31838393755095 22847.000334836564 23666.018267281885 2.1925019332035537e-07 6.659060015029532 -1.8682696983002458 STGGAPTFNVTVTK ddPTM_A549_MK2206_60min_R1 2 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ; 203.82 3.0581e-31 25097000.0 5845.8 6016.0 5923.6 4970.2 7446.6 6473.0 6031.5 6134.7 9212.3 8477.9 8861.1 False True 6832.428123911936 6322.188703586412 6763.6555525056465 6187.899223120753 6351.215004451367 7157.968563570347 7127.34547699942 7004.312511730809 7125.728759020166 6562.736501842732 6660.644316081303 1.0257908694232303 0.9491857549459994 1.0154656564043865 0.929024119810877 0.9535436367795744 1.0746660869262026 1.0700684706720225 1.051596839485898 1.0698257437071026 0.9853005490771839 1.0 12.70144602752226 -7.254010751934908 24.922338394998697 1.0409900603193079 0.9729280900093806 0.4483913561424149 0.037143542290809295 416.8736021570195 1398570.548119461 0.005636305387113168 0.009638701920847129 5.571719547185646e-08 7.254010751934908 -0.06806197030992722 STGGAPTFNVTVTK ddPTM_A549_PD325901_60min_R1 2 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ; 230.06 7.470599999999999e-47 59231000.0 10613.0 10809.6 11569.2 10978.900000000001 12931.2 12844.5 11381.7 11497.9 12314.599999999999 12982.400000000001 13018.2 False True 11690.423947122339 11720.562928294505 12354.355483251207 11657.041718108998 12022.957122218204 12739.898650580399 11814.836821805218 11268.565364571938 11797.060187175053 12162.689048409751 11417.043929169078 1.0239449037464776 1.0265847272734034 1.0820975692041808 1.021021009503761 1.0530709347190208 1.1158666577459335 1.0348420217268177 0.9869950080320006 1.0332849956927188 1.065309823091391 1.0 13.47890153981376 -8.00138649295659 24.999984085765295 1.0138559980301352 1.0542183449412477 0.17021929304514716 0.0320507081802776 51.105213462921455 921500.316314964 0.004502307948822791 0.00617284300260226 9.968125726534593e-09 8.00138649295659 0.04036234691111251 STGHT(ph)PTKPSGSSVSEK ddPTM_A549_PD325901_60min_R1 1 STGHTPTKPSGSSVSEK 17 1 Q8NI08-2;Q8NI08;Q8NI08-7 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 S(0.085)T(0.085)GHT(0.822)PT(0.008)KPSGSSVSEK 55.843999999999994 0.0058419 8384000.0 4888.3 4445.4 4386.2 5155.5 5625.9 5051.6 5007.0 5388.7 5389.7 5720.1 6038.7 True False 5384.556617423737 4820.029459132655 4683.873908363276 5473.943526009981 5230.7561923013645 5010.461444452642 5197.54412493553 5281.218151146629 5163.189652186623 5358.931909801626 5295.978182473249 1.016725604203513 0.910130157840204 0.884420922250832 1.033603866444484 0.9876846187947426 0.9460880071285964 0.9814134322034254 0.9972129735399085 0.9749265337372267 1.0118870820761154 1.0 12.370681463434392 -6.996308326974054 0.2665137534318411 0.9966274312833705 0.9376586536794679 0.1170776607564975 0.041126102751169465 6.1792647175777144 0.7220121465754789 0.028730703587633948 0.11675192126250747 1.008536622189904e-07 6.996308326974054 -0.05896877760390262 STGKGDS(ph)CDS(ph)SEDKK ddPTM_A549_PD325901_60min_R1 1 STGKGDSCDSSEDKK 15 2 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LP59 P46100-4 ATRX Transcriptional regulator ATRX 2 S(0.029)T(0.03)GKGDS(0.933)CDS(0.845)S(0.163)EDKK 44.382 0.046439999999999995 8783900.0 3633.2 3397.8 2719.2 2818.9 2737.0 2257.8 1507.7 2222.3 1918.3 2838.4 4336.8 True False 4002.0397893795207 3684.1445305801367 2903.741263877939 2993.0170508136025 2544.7625621374073 2239.413225371203 1565.076348545096 2177.9744831393755 1837.6805220679444 2659.182939595626 3803.401093240266 1.0522265970034799 0.9686447577479844 0.7634591232144092 0.7869317427849121 0.6690755194502572 0.588792286291152 0.41149389984839757 0.5726386541272915 0.4831676904479071 0.6991592194474983 1.0 11.893074373174668 -5.7021217097814985 1.419907857926938 0.6949095487576231 1.0903601279909483 0.43905374003471787 0.1514300788238778 0.7027741636122692 2.1089336484062664 0.03195759697320864 0.3127041283259723 1.9855383979448806e-06 5.7021217097814985 0.39545057923332516 STGS(ph)PTQETQAPFIAK ddPTM_A549_MK2206_60min_R1 2 STGSPTQETQAPFIAK 16 0 O15231-3;O15231-2;H0Y704 O15231-3 ZNF185 Zinc finger protein 185 1 S(0.07)T(0.378)GS(0.392)PT(0.161)QETQAPFIAK;S(0.001)T(0.001)GS(0.994)PT(0.003)QETQAPFIAK 167.41 1.0989e-22 29163000.0 6924.4 8632.5 8353.9 6725.3 8832.1 8483.9 6783.4 6819.0 10550.8 10819.8 9927.5 True False 8093.069434673751 9071.857377611323 9538.60863665287 8372.998801910195 7532.909789812123 9381.660666842965 8015.855974248178 7785.614132311673 8161.060646165452 8375.599665322545 7462.227764938564 1.0845379810971745 1.215703629449055 1.2782521436118883 1.1220508225775294 1.009471973665245 1.2572198226008187 1.0741907412570342 1.043336437530431 1.0936493636002869 1.1223993597026718 1.0 12.865390679972576 -8.768712337122475 0.18631910250709666 0.9517600251392317 1.22793291768797 0.13448759709257263 0.0839421320820055 2.331729021009677 0.3724951182517959 0.24151923144687254 0.21875117796484753 1.7032863376314087e-09 8.768712337122475 0.27617289254873834 STGS(ph)PTQETQAPFIAK ddPTM_A549_PD325901_60min_R1 2 STGSPTQETQAPFIAK 16 0 O15231-3;O15231-2;H0Y704 O15231-3 ZNF185 Zinc finger protein 185 1 S(0.001)T(0.004)GS(0.995)PTQETQAPFIAK;STGS(0.999)PTQETQAPFIAK 302.96 3.6000999999999984e-143 55306000.0 18487.8 17798.6 16784.1 17082.3 21106.6 18436.2 18044.4 20077.1 17101.9 18358.0 19270.2 True False 20364.667846000983 19298.550486192125 17923.169956992402 18137.434874281884 19624.145229817088 18286.061699702637 18731.089516274562 19676.64649031975 16383.166616459266 17198.872747004123 16900.087563862427 1.2050036882380948 1.1419201476481309 1.0605371060513105 1.0732154378339012 1.1611860089872867 1.0820098789786066 1.1083427494380194 1.1642925763529448 0.9694131201717264 1.0176795050328964 1.0 14.044743101064176 -8.768641720698238 24.999987508242125 0.985556186063977 1.1205578054312062 0.6400449095217766 0.04277947453040379 67.24995142487118 233430.080874948 0.007284240666814593 0.00783292660940932 1.703563315062485e-09 8.768641720698238 0.1350016193672292 STGVSFWTQDSDENEQEQQS(ph)DTEEGSNKKETQTDSISR ddPTM_A549_PD325901_60min_R1 1 STGVSFWTQDSDENEQEQQSDTEEGSNKKETQTDSISR 38 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;H0YIM2;H0YIS3 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 STGVSFWTQDSDENEQEQQS(0.889)DT(0.109)EEGS(0.002)NKKETQTDSISR 124.27 5.2635e-22 23383000.0 1067.4 792.49 909.57 546.97 507.85 1020.0 762.4 1019.3 1205.0 1292.8 1166.7 True False 1175.7616622216515 859.275913543897 971.2988898887381 580.7550946410004 472.1803679873884 1011.6934581799227 791.4135492012879 998.9692618746185 1154.358040500378 1211.1723873693713 1023.2032963206556 1.1490987826657535 0.8397900169338525 0.9492726356350093 0.5675852459910381 0.46147268063473346 0.9887511717543119 0.773466575065911 0.9763155234808367 1.1281805332834078 1.1837064948135285 1.0 9.998877101744277 -8.416692523418433 3.729296271474674 1.060498229217186 0.8076414410626775 0.3110070371977328 0.18423744966407385 0.23784967040091906 6.018185574053845 0.03099039968086065 0.0374752091089375 3.830958757553866e-09 8.416692523418433 -0.2528567881545085 STIFIS(ph)PSSVK ddPTM_A549_MK2206_60min_R1 1 STIFISPSSVK 11 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 STIFIS(0.991)PS(0.009)SVK 167.71 5.7684e-15 5984200.0 4491.9 4819.5 4675.1 4458.6 5764.0 4445.5 4909.5 5026.5 6793.6 6143.9 6848.8 True False 5250.022903588904 5064.791964251117 5338.099478951848 5550.957200154164 4916.123235524632 4915.919859315927 5801.492600402658 5739.021768010645 5254.8604471499475 4755.988722876133 5148.053942735963 1.0198072829048 0.9838265139777079 1.0369159955062328 1.0782632159452619 0.954947887145085 0.9549083816909917 1.1269292561684818 1.1147944119949547 1.0207469668348546 0.9238420528959211 1.0 12.329811455258374 -8.997077090582433 13.89729956114813 1.0091445401162717 1.033824823531966 0.08748987332648128 0.060086829510013394 0.41122963533100565 1690.7820415159208 0.010230867570772743 0.010281872699061962 1.0067529466645468e-09 8.997077090582433 0.024680283415694282 STIFIS(ph)PSSVK ddPTM_A549_PD325901_60min_R1 2 STIFISPSSVK 11 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7 E9PHV5 SSFA2 Sperm-specific antigen 2 1 STIFIS(0.991)PS(0.008)SVK;ST(0.005)IFIS(0.979)PS(0.016)SVK 179.35 6.7209e-16 22089000.0 13594.6 13210.099999999999 14077.400000000001 15261.3 16238.5 16140.4 16018.9 14756.6 16324.9 15667.400000000001 16563.9 True False 14974.71378418442 14323.361487849988 15032.777018283059 16203.95584007294 15097.96377978381 16008.95793373257 16628.50800537842 14462.268036671256 15638.82122436897 14678.157690184782 14526.645307213248 1.0308445940198376 0.9860061414687176 1.0348416100459539 1.1154644102191178 1.039329002704215 1.102040945804829 1.1446901644333178 0.9955683319045433 1.0765610981499953 1.0104299636817249 1.0 13.826413953997108 -5.992013016576637 23.209600332420166 1.0517467700744807 1.008924942218934 0.13823422054860313 0.047236767611349234 139.73710362994777 406043.94110107195 0.0069451498259176965 0.021514537916976263 1.0185608595193846e-06 5.992013016576637 -0.04282182785554678 STIGVMVTAS(ph)HNPEEDNGVK ddPTM_A549_MK2206_60min_R1 8 STIGVMVTASHNPEEDNGVK 20 0 D6RC77;D6RCQ8;D6RF77;A0A494C163;A0A494C099;A0A494C0G1;H0Y987;O95394;O95394-3;O95394-4 D6RC77 PGM3 Phosphoacetylglucosamine mutase 1 STIGVMVT(0.001)AS(0.999)HNPEEDNGVK;STIGVMVT(0.005)AS(0.995)HNPEEDNGVK;STIGVMVT(0.001)AS(0.999)HNPEEDNGVK;STIGVMVT(0.001)AS(0.999)HNPEEDNGVK;S(0.002)T(0.002)IGVMVT(0.221)AS(0.776)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK;STIGVMVT(0.031)AS(0.969)HNPEEDNGVK 275.2 6.234799999999999e-127 983249100.0 39860.799999999996 40508.9 41643.3 34351.2 54776.3 45902.9 38965.9 36994.5 65422.100000000006 56924.5 60979.4 True False 46588.32853700589 42570.62998249858 47548.94612560919 42767.245542083954 46718.77883172582 50760.31441012101 46045.49964722073 42238.58366590467 50604.09880762607 44065.21591421774 45836.53203417724 1.016401688117855 0.9287489278367855 1.0373591547055767 0.933038422500971 1.019247677745139 1.1074204822535971 1.0045589752053596 0.9215047864967223 1.104012379686447 0.9613557998096639 1.0 15.484210274290865 -6.988591370511192 24.231660767344053 1.0405081501475688 0.9790649015129743 0.005144743059995238 0.061283681244491316 209.0360568253541 443982.4502871939 0.008806076719907628 0.016631365162166598 1.026617420572847e-07 6.988591370511192 -0.061443248634594494 STIGVMVTAS(ph)HNPEEDNGVK ddPTM_A549_PD325901_60min_R1 7 STIGVMVTASHNPEEDNGVK 20 0 D6RC77;D6RCQ8;D6RF77;A0A494C163;A0A494C099;A0A494C0G1;H0Y987;O95394;O95394-3;O95394-4 D6RC77 PGM3 Phosphoacetylglucosamine mutase 1 STIGVMVT(0.004)AS(0.996)HNPEEDNGVK;STIGVMVT(0.001)AS(0.999)HNPEEDNGVK;STIGVMVT(0.051)AS(0.949)HNPEEDNGVK;STIGVMVT(0.001)AS(0.999)HNPEEDNGVK;STIGVMVT(0.034)AS(0.966)HNPEEDNGVK;STIGVMVT(0.021)AS(0.979)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK 249.99 8.692599999999999e-98 1398995100.0 30324.4 35035.200000000004 36689.1 37465.8 42275.100000000006 35584.4 39147.49999999999 37763.3 43581.600000000006 40639.3 41176.100000000006 True False 33402.910764356624 37987.739260045106 39179.04295548105 39779.97737499462 39305.84281717758 35294.61244437021 40637.27953483397 37010.08135676424 41750.01691109649 38073.327662453696 36111.70073680374 0.9249885794028412 1.0519509877675015 1.0849403976022427 1.101581386734641 1.0884517210544584 0.9773733090449328 1.1253216742964955 1.024877826345213 1.15613543697061 1.0543210894426454 1.0 15.140178747406553 -5.267201611101658 3.4616470006564724 1.0722254518788565 0.9076229314391279 0.3954198113442955 0.050395829311135384 0.2664184602636617 5.45897401804339 0.008357966671427021 0.11375276003112075 5.4050334860040095e-06 5.267201611101658 -0.16460252043972867 STIT(ph)SREIQTAVR ddPTM_A549_MK2206_60min_R1 2 STITSREIQTAVR 13 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q16778;P33778;P23527;P06899 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J 1 S(0.014)T(0.014)IT(0.486)S(0.486)REIQTAVR;S(0.01)T(0.01)IT(0.49)S(0.49)REIQTAVR 87.566 7.6695e-05 12107400.0 1533.55 1486.24 1520.6799999999998 1537.74 1545.03 1090.1100000000001 1118.75 1154.68 1528.4099999999999 2176.24 2536.3 True False 1792.3757483022266 1561.8832677556964 1736.3352902937881 1914.4863690317727 1317.758133688865 1205.4647166435457 1322.0123936654404 1318.3594260591935 1182.227575369236 1684.6258725356786 1906.4667116810554 0.9401558061938425 0.81925546257164 0.9107608748975998 1.004206555142862 0.6912043759352673 0.6323030500651172 0.693435865187353 0.6915197721426306 0.6201144599722852 0.8836377064513414 1.0 10.896685625423501 -6.763842622412995 24.996652445638784 0.7750905441361395 0.9109394538201853 0.32594340562143487 0.11497803771747525 100.2979034850783 1043237.5334652211 0.023287940096630336 0.04554124013658858 1.7224926506709653e-07 6.763842622412995 0.13584890968404573 STIT(ph)SREIQTAVR ddPTM_A549_PD325901_60min_R1 1 STITSREIQTAVR 13 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q16778;P33778;P23527;P06899 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J 1 S(0.01)T(0.01)IT(0.531)S(0.449)REIQTAVR 84.874 0.00013597 18716000.0 2050.8 1748.9 1918.1 1945.0 2146.3 1765.5 2171.0 2416.8 2511.3 2261.1 2619.0 True False 2258.9957062808335 1896.285940765083 2048.273800472299 2065.138232584504 1995.5512923330339 1751.12235334966 2253.6185930167844 2368.5950280570773 2405.7587942809937 2118.3337601182593 2296.8796032088776 0.9835063636443468 0.8255922243881911 0.8917636769514339 0.8991060000268986 0.8688097058048362 0.7623918776165881 0.9811653122211303 1.0312229795362409 1.0474030902272828 0.922265911177417 1.0 11.165459520826872 -7.961311070626754 10.807930812444955 1.0228479365640943 0.871679291546642 0.5094226524146779 0.059581398922935805 0.23686094876715005 64.97059345540796 0.007726538290030726 0.010672700758345428 1.0931730824316789e-08 7.961311070626754 -0.1511686450174523 STITS(ph)REIQTAVR ddPTM_A549_PD325901_60min_R1 1 STITSREIQTAVR 13 1 P62807;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;O60814;Q5QNW6-2;Q99880;P57053;Q16778;P33778;P23527;P06899 P62807;Q16778 HIST1H2BC;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ Histone H2B type 1-C/E/F/G/I;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J 1 S(0.002)T(0.002)IT(0.046)S(0.95)REIQTAVR 85.469 8.2964e-05 12249000.0 1672.3 1262.2 1509.6 1639.8 1312.3 2005.6 1886.6 2026.6 1845.7 1861.4 1714.0 True False 1842.0706649178062 1368.570023691286 1612.050533962245 1741.0867217439934 1220.128575189228 1989.2670585545613 1958.395595387132 1986.1778731630557 1768.131647594644 1743.8708863314885 1503.1888659412045 1.2254419299230337 0.9104444921725597 1.0724204858668096 1.1582621194136054 0.8116934623682557 1.3233646839906603 1.302827369041817 1.3213095959963974 1.1762538212306066 1.1601142915860967 1.0 10.553810570588775 -6.012591079337842 23.602980456320076 1.1192210084778171 1.0488155972229438 0.016242386202332315 0.16005828721644838 962.4945011887677 1804298.0579701548 0.02323565738666892 0.0651577232507349 9.714242051440388e-07 6.012591079337842 -0.07040541125487332 STKPVVFS(ph)PTLMLTDEEK ddPTM_A549_MK2206_60min_R1 2 STKPVVFSPTLMLTDEEK 18 1 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 STKPVVFS(0.819)PT(0.181)LMLTDEEK;S(0.008)T(0.008)KPVVFS(0.769)PT(0.215)LMLTDEEK 148.2 1.6325000000000002e-17 15173300.0 8744.9 10215.1 9537.1 9171.4 12820.3 10179.0 10259.0 10232.5 13629.8 12858.5 13738.7 True False 10220.82532772204 10735.004957780173 10889.604188297933 11418.39341171979 10934.450852948714 11256.135023726654 12122.92750535307 11682.98821071699 10542.672062318106 9953.755919383904 10327.001621169626 0.9897185749220827 1.0395084024945023 1.0544787914020477 1.1056833174416172 1.058821452156438 1.089971265294698 1.1739058392807766 1.13130496530258 1.0208841296883668 0.9638573019083686 1.0 13.334133817277602 -8.910262977497073 7.68198833739811 1.00914832095065 1.081705357444085 0.37975308039327704 0.04791502167056376 0.21118040370821745 15.710468642735714 0.008572279078852675 0.009096263517012912 1.2295240340469732e-09 8.910262977497073 0.07255703649343492 STKPVVFS(ph)PTLMLTDEEK ddPTM_A549_PD325901_60min_R1 3 STKPVVFSPTLMLTDEEK 18 1 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 STKPVVFS(0.794)PT(0.206)LMLTDEEK;STKPVVFS(0.588)PT(0.412)LMLTDEEK;S(0.004)T(0.004)KPVVFS(0.93)PT(0.063)LMLTDEEK 152.07 5.4229999999999996e-18 32247000.0 17277.9 18472.5 17820.5 20294.8 22146.800000000003 22173.0 20036.4 21721.4 24977.8 25590.6 28798.0 True False 19031.939688682287 20029.24240424438 19029.906293371892 21548.363703165032 20591.28517031229 21992.430439434727 20798.896166338778 21288.149636891336 23928.06992863927 23974.805148680876 25256.028565562887 0.7535602693541742 0.793047978713275 0.7534797580693094 0.8531968376273801 0.8153017849524026 0.8707794411280425 0.8235220399892365 0.8428937899570704 0.9474201324457514 0.9492705904431473 1.0 14.624340177058812 -8.429912121897987 0.38487725343446305 1.0098075654149656 0.7634111767374335 0.8037118866604505 0.03427978356102534 0.2516793882967355 0.09751701079369669 0.0166182783673531 0.020511573941540507 3.7161041567135224e-09 8.429912121897987 -0.2463963886775321 STKPVVFSPT(ph)LMLTDEEK ddPTM_A549_MK2206_60min_R1 1 STKPVVFSPTLMLTDEEK 18 1 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 STKPVVFS(0.313)PT(0.687)LMLTDEEK 164.58 1.4586e-23 9026500.0 6370.3 7329.9 6759.8 5584.9 8611.4 5552.0 6257.6 6597.0 8638.3 8657.3 8671.8 True False 7445.450901118104 7702.9606014657675 7718.441286350813 6953.20075071569 7344.674467452601 6139.508954880669 7394.524920313613 7532.144952465186 6681.738842530524 6701.609917244019 6518.352730495519 1.1422289049018843 1.1817342386870489 1.184109176884643 1.0667113361610174 1.1267684906174549 0.9418804426089948 1.1344161977793872 1.155528898770196 1.0250655524164285 1.0281140334568193 1.0 12.670291708043829 -2.0000000430884026 0.12329320893999929 0.9567041170599768 1.689423906277144 0.3527276637122967 0.06243454244532649 52.608039996173346 0.42714419702125583 0.20268374324744967 6.690110270303787 0.009999999007852913 2.0000000430884026 0.7327197892171671 STLEPVEK ddPTM_A549_MK2206_60min_R1 2 STLEPVEK 8 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ; 133.86 0.0029885000000000003 17724800.0 9692.7 11330.9 10566.4 10744.2 13569.7 10411.3 10040.9 10623.5 14768.599999999999 15125.3 15413.0 False True 11328.590796236827 11907.594411813048 12064.874405766037 13376.529482325468 11573.615105672889 11513.016855538386 11865.201558485196 12129.413658104264 11423.53568060802 11708.484225022932 11585.5267228404 0.977822680595347 1.027799140831267 1.0413746991736355 1.154589670571833 0.9989718536366561 0.9937413404641272 1.0241400190371515 1.0469453783393043 0.9860178094524591 1.0106130265048827 1.0 13.500036015737985 -8.196989581169225 0.8316540070413763 0.9937464832803414 1.040706753858255 0.06637644627478378 0.044914735419108544 0.7911740620581218 1.0916215519699548 0.009717842417313313 0.013556193896778814 6.3534617377892e-09 8.196989581169225 0.04696027057791363 STLEPVEK ddPTM_A549_PD325901_60min_R1 2 STLEPVEK 8 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 A0A0G2JIW1 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ; 147.19 0.0021801999999999998 27400000.0 15377.8 14911.8 15304.5 16246.5 20176.0 20085.1 17473.9 18728.199999999997 23433.0 19124.9 19826.0 False True 16938.942935461964 16168.469718966648 16343.155403434801 17250.009406521403 18758.907363421375 19921.533604793683 18138.878826584973 18354.651359011328 22448.192500452562 17917.35055012414 17387.527687368914 0.9742007742576984 0.9298889416413211 0.939935550199423 0.9920909813447826 1.0788714589394266 1.1457369882013522 1.0432120743515407 1.0556216898130362 1.2910514308920378 1.0304714317228731 1.0 14.085765191622386 -6.764852063907096 1.9582122079188558 1.126922879433312 0.9454073619855061 0.3776651760616173 0.07753988081308823 0.28276155005231995 2.2054390316996386 0.01609521276425326 0.037478612332136306 1.7184936673186937e-07 6.764852063907096 -0.1815155174478058 STLESEKPGS(ph)PEAAET(ph)SPPSNIIDHCEK ddPTM_A549_MK2206_60min_R1 1 STLESEKPGSPEAAETSPPSNIIDHCEK 28 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 S(0.054)T(0.057)LES(0.056)EKPGS(0.837)PEAAET(0.517)S(0.474)PPS(0.005)NIIDHCEK 64.53 0.0027354 12552000.0 1797.3 2068.9 2216.3 1214.4 2507.5 2157.0 2067.1 1898.1 2888.6 2770.2 2825.8 True False 2100.64030023383 2174.1981730136167 2530.6046662533367 1511.9280545164884 2138.650071665165 2385.2523082992793 2442.665313024205 2167.161487687458 2234.336712146332 2144.409896012543 2124.0758718875254 0.9889666974876611 1.0235972272880964 1.191390900742428 0.7118051075891834 1.0068614308794386 1.1229600316393895 1.1499896709685657 1.0202844052654507 1.0519100290710544 1.009573115722532 1.0 11.052619584721715 -7.004851449858832 24.96211005296451 1.0422835708723295 0.9800584401089751 0.09137922855306879 0.11287162615942724 510.7357569994239 2627915.9156405088 0.016047511330484807 0.029766994967869505 9.888912864269676e-08 7.004851449858832 -0.06222513076335434 STLESEKPGS(ph)PEAAETS(ph)PPSNIIDHCEK ddPTM_A549_PD325901_60min_R1 1 STLESEKPGSPEAAETSPPSNIIDHCEK 28 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 S(0.003)T(0.003)LES(0.056)EKPGS(0.934)PEAAET(0.206)S(0.795)PPS(0.002)NIIDHCEK 93.492 3.6694999999999998e-09 25583000.0 3610.6 3981.0 3694.6 4694.8 3667.5 4003.6 4617.1 4557.7 4098.3 4166.5 4318.8 True False 3977.1454540167642 4316.4928413207135 3945.337773434624 4984.787133335592 3409.907452188141 3970.9960089893507 4792.806267074064 4466.7930980535175 3926.0627032221537 3903.4264789406593 3787.6149791288653 1.050039530399019 1.139633480463605 1.0416417178553967 1.3160754619473154 0.9002782677167479 1.0484159638376607 1.265388983168608 1.1793155119163827 1.0365527448951875 1.0305763654568791 1.0 11.887073969234796 -8.917812768445547 6.593144128414508 1.0159138049046763 1.1177204685569335 0.13506842110317252 0.10803261803002888 0.29106079063992657 18.865198258462495 0.01832378054479172 0.019389080940606963 1.208334655943347e-09 8.917812768445547 0.10180666365225721 STLGQYS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 STLGQYSPLR 10 0 Q9P2B7 Q9P2B7 CFAP97 Cilia- and flagella-associated protein 97 1 STLGQYS(1)PLR 116.03 2.1987e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STLGQYS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 STLGQYSPLR 10 0 Q9P2B7 Q9P2B7 CFAP97 Cilia- and flagella-associated protein 97 1 STLGQY(0.001)S(0.999)PLR;STLGQYS(1)PLR 77.124 0.0014244000000000001 14326000.0 3537.1 3620.4 3977.4 3523.8 4726.2 4317.8 3921.9 3925.6 4024.6 4857.6 4559.9 True False 3896.183788124603 3925.5038137949077 4247.330282049175 3741.4571228695518 4394.248016504865 4282.637268362025 4071.1500506460284 3847.3008284263765 3855.4600579235016 4550.8903069968 3999.06120758769 0.9742746074333919 0.9816063345934248 1.062081839105245 0.9355838604747112 1.0988198950712131 1.070910657790455 1.0180264415362184 0.9620509986510413 0.9640912848766294 1.137989660763903 1.0 11.965445647132324 -8.178165393722045 7.3084849008173 0.9810225358043558 1.0222038797772313 0.0 0.06532169017746262 0.40007991235051643 30.909662432738305 0.007241910561043244 0.009361092429197113 6.634903431847904e-09 8.178165393722045 0.04118134397287543 STLNPQWNES(ph)FTFK ddPTM_A549_MK2206_60min_R1 2 STLNPQWNESFTFK 14 0 P17252;J3KRN5 P17252 PRKCA Protein kinase C alpha type 1 STLNPQWNES(1)FTFK;STLNPQWNES(1)FTFK 326.57 2.965899999999999e-157 55057000.0 17832.9 17974.199999999997 13715.0 13115.7 23369.0 19632.9 19330.9 17365.699999999997 30528.0 25698.0 29423.0 True False 20842.657547454437 18889.010005984514 15659.993230909407 16329.047088786147 19931.45105672711 21710.440446735716 22843.07430677744 19827.3411552258 23613.456743198516 19892.803951963877 22116.457066510957 0.9424049016881043 0.854070339981647 0.708069705008131 0.7383211081087583 0.901204519186194 0.9816418778760891 1.0328541428711353 0.8964971693069517 1.0676871377809576 0.8994570826665467 1.0 14.432832671905084 -7.143662360971831 2.5813025501758253 1.019591014852493 0.8073354754772674 0.45649308792224985 0.07951889083911552 0.1391749626935003 1.8062162644009776 0.011181592883989473 0.020748360603951445 7.183525521062191e-08 7.143662360971831 -0.21225553937522557 STLNPQWNES(ph)FTFK ddPTM_A549_PD325901_60min_R1 1 STLNPQWNESFTFK 14 0 P17252;J3KRN5 P17252 PRKCA Protein kinase C alpha type 1 STLNPQWNES(0.933)FT(0.067)FK 262.73 2.1016999999999996e-83 43584000.0 12110.0 11503.0 11324.0 10402.0 12930.0 13125.0 11069.0 11532.0 15414.0 13594.0 15285.0 True False 13339.398285089183 12472.398179782009 12092.51473674382 11044.507915343967 12021.841406078433 13018.114351579887 11490.236852189208 11301.985213321006 14766.203183628893 12735.672520033451 13405.04189959819 0.9951030653241766 0.9304259004334677 0.902087052566862 0.8239070043992194 0.8968149071163127 0.9711356703756441 0.8571578468944302 0.8431145010937845 1.1015409943680596 0.9500658495081016 1.0 13.710488108250606 -8.762542615707437 24.999999960611767 1.0479499164303496 0.9013588720004208 0.38912619595088926 0.060768037959948736 15.771778183534611 357396.6267631201 0.010326935298917322 0.011299548692677975 1.7276564436681615e-09 8.762542615707437 -0.14659104442992887 STLNPQWNESFT(ph)FK ddPTM_A549_MK2206_60min_R1 1 STLNPQWNESFTFK 14 0 P17252;J3KRN5 P17252 PRKCA Protein kinase C alpha type 1 STLNPQWNES(0.111)FT(0.889)FK 62.357 0.006481799999999999 1812900.0 1427.3 1928.3 2034.9 1895.8 2265.7 1905.7 1895.2 1423.9 3292.5 2523.0 2968.0 True False 1668.1933458653236 2026.4422335647737 2323.4794185619785 2360.271085105697 1932.4185313546407 2107.359909098719 2239.5333081338476 1625.7421855108653 2546.754007042096 1953.0525477003987 2230.963687367177 0.7477456290801423 0.9083259602294267 1.0414689542992883 1.0579603327793825 0.8661810778440514 0.9445962392985758 1.0038412192969326 0.7287174572659447 1.1415488389448383 0.8754300030787372 1.0 11.123451316181548 -8.804278540529209 24.999794165650485 1.0668424975351398 0.923962074240837 0.040597116984915305 0.11985356693436054 137.24937384298389 80094.48351225894 0.018955521465901782 0.020179757545884393 1.5693559542225808e-09 8.804278540529209 -0.14288042329430284 STLPDADRER ddPTM_A549_MK2206_60min_R1 2 STLPDADRER 10 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 125.74 1.1971e-05 31892000.0 3405.8999999999996 3649.2999999999997 3637.4 3319.4 4164.7 3430.7 3387.0 3406.8999999999996 4890.6 5249.1 5036.6 False True 3980.7326537397225 3835.033782579438 4153.238015173887 4132.653149013526 3552.078146944731 3793.734396885648 4002.374057961873 3889.838508193666 3782.886908683395 4063.3246643417233 3785.873216911565 1.0514701432572324 1.0129852646539435 1.0970356842963722 1.091598400747518 0.9382454042775477 1.0020764509331603 1.0571865006158143 1.0274613768938923 0.9992111969796479 1.0732859849058805 1.0 11.886410382868101 -6.737786058889809 24.999993645941515 1.0028352745138787 1.0620920981154187 0.2352687717611016 0.039695893130768906 180.51781386645413 190794.3003401466 0.004800396986011485 0.00998883978311854 1.8290009923549739e-07 6.737786058889809 0.059256823601540054 STLPDADRER ddPTM_A549_PD325901_60min_R1 2 STLPDADRER 10 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 147.3 3.5966e-08 50810000.0 7109.5 7465.8 7363.799999999999 7576.200000000001 8428.1 7368.400000000001 7229.9 8170.4 8332.3 8535.5 8882.1 False True 7831.251206262725 8094.96916722738 7863.551750126641 8044.164667201397 7836.139331366564 7308.394193385236 7505.037800853086 8007.434962445198 7982.122407353767 7996.567073322454 7789.658008270932 1.0053395409590036 1.039194424021218 1.0094861342792263 1.0326723790261694 1.0059670556841236 0.9382175938436965 0.9634617839299695 1.0279571906678102 1.0247076827863917 1.0265620217000322 1.0 12.927344275259415 -6.875234867238563 8.000569690210742 1.0034145367760288 1.0219830878695226 0.12825610131816356 0.02746087402976875 0.5179596637615577 34.4456701648007 0.00431984930661687 0.008190532141192959 1.332800456339426e-07 6.875234867238563 0.018568551093493868 STLS(ph)PPEASPGPPAAPR ddPTM_A549_MK2206_60min_R1 1 STLSPPEASPGPPAAPR 17 0 Q6NUJ5-2;Q6NUJ5 Q6NUJ5-2 PWWP2B PWWP domain-containing protein 2B 1 S(0.017)T(0.017)LS(0.96)PPEAS(0.007)PGPPAAPR 78.69 0.00034328 2725900.0 1520.7 1456.2 1336.9 1674.8 2090.8 1521.5 1458.7 1634.8 1986.7 1725.2 3485.5 True False 1777.3569824545636 1530.3143600669102 1526.4925228146396 2085.126075184628 1783.2460896660118 1682.5041201100394 1723.726908281366 1866.5379063650275 1536.7156221079827 1335.476121796563 2619.954155093765 0.6783923982024617 0.5840996710158625 0.5826409289822128 0.7958635730822564 0.6806401883784838 0.6421883821283219 0.6579225460606106 0.7124315143973297 0.5865429435550507 0.5097326299393845 1.0 11.355325851845597 -10.81712199028698 0.8963505378132315 1.015683566170902 0.6546646801767505 0.0 0.15610669779925898 0.21744825011668023 0.2874357083256894 0.0543812319867026 0.011336958634939052 1.5236247181412204e-11 10.81712199028698 -0.36101888599415155 STLT(ph)PTQR ddPTM_A549_MK2206_60min_R1 2 STLTPTQR 8 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.003)T(0.012)LT(0.903)PT(0.083)QR;S(0.001)T(0.008)LT(0.944)PT(0.047)QR 78.939 0.004437699999999999 12044000.0 3712.8 3801.8 3692.6 3574.8 4553.9 3333.3 3822.8 3217.7 6132.2 5667.8 6620.700000000001 True False 4339.429870755115 3995.295381199273 4216.266205210066 4450.626160478871 3884.02734251485 3686.027593534535 4517.353276875301 3673.8188287929706 4743.266491111175 4387.440043541942 4976.597467975698 0.8719672223199197 0.8028166647812921 0.8472186533754541 0.8943110607435216 0.7804584090854214 0.7406722398695185 0.9077192410968289 0.7382190045375217 0.9531143560703869 0.8816144106038368 1.0 12.280943984025656 -8.898793798687704 6.496505793916992 0.9795427502687563 0.8243130929724091 0.4147966616521517 0.06146145334558356 0.09487337613821736 5.274436398817534 0.009090203758528665 0.009631579092231137 1.2624267875926245e-09 8.898793798687704 -0.1552296572963472 STLT(ph)PTQR ddPTM_A549_PD325901_60min_R1 2 STLTPTQR 8 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 S(0.002)T(0.005)LT(0.975)PT(0.018)QR;S(0.012)T(0.009)LT(0.943)PT(0.036)QR 87.806 0.0028626 17910100.0 9741.599999999999 9618.1 10000.400000000001 10482.9 10456.2 10737.8 8663.3 9866.6 10552.400000000001 10661.3 12312.1 True False 10730.56006061311 10428.651041724886 10679.087281290442 11130.404924606735 9721.792583931738 10650.354916906239 8992.986622239656 9669.80292280204 10108.919324959494 9988.143698531157 10797.789752832383 0.9937737542813669 0.9658134933576876 0.989006780622784 1.0308040052073717 0.9003502389349266 0.9863458319432947 0.8328543922501078 0.89553539605321 0.9362026448336623 0.9250174273777793 1.0 13.398448410552877 -6.751774622064823 24.9999889583525 0.950223860205565 0.9923581567639509 0.23350086775561263 0.048677197109482484 357.84574099036286 925638.4783310001 0.007871679074763147 0.016221733058073392 1.7710277980744063e-07 6.751774622064823 0.04213429655838585 STLTKNT(ph)PR ddPTM_A549_MK2206_60min_R1 1 STLTKNTPR 9 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(0.003)T(0.003)LT(0.012)KNT(0.982)PR 46.73 0.014216 12510000.0 2502.0 2665.8 2450.9 1849.4 3110.3 2436.4 2539.0 2243.7 3511.4 3457.8 3270.3 True False 2924.276431972986 2801.477833447582 2798.4744739070975 2302.5030830227197 2652.7789901894953 2694.2182308485694 3000.303434651667 2561.751346043071 2716.0735065535678 2676.680578453604 2458.194254311617 1.189603476960322 1.1396486785101922 1.1384269038130883 0.9366644149396174 1.0791575912019895 1.0960151851803297 1.2205314650740895 1.0421273020021982 1.1049059698148902 1.0888808212608776 1.0 11.263383211218324 -10.706622138275677 0.6111478594882587 0.985792685132671 1.1049466557396606 0.03930602301407227 0.07584049135963304 1.388543055757901 0.7512750742273018 0.09098103132513481 0.015384656730504867 1.9650692590203878e-11 10.706622138275677 0.11915397060698951 STLTKNT(ph)PR ddPTM_A549_PD325901_60min_R1 1 STLTKNTPR 9 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(0.002)T(0.002)LT(0.062)KNT(0.934)PR 45.161 0.019756 17528000.0 3921.9 3616.7 3466.6 3934.0 4422.2 4415.2 4204.9 3997.9 4399.3 4333.5 5156.0 True False 4320.048400849818 3921.492001809754 3701.864322359248 4176.994245237757 4111.5999277617975 4379.244075054897 4364.919770509567 3918.1587482081222 4214.412719977853 4059.882070440261 4521.844686576927 0.9553730170507314 0.8672327940521006 0.8186624218536769 0.9237367788498227 0.9092749116233604 0.9684640624775681 0.9652962613835032 0.8664956494059064 0.9320118252819066 0.8978375755567192 1.0 12.142695724837926 -14.999999999992344 0.11696356097563267 1.3116552865654085 0.8614652453427508 0.0 0.05305746790694788 63.00330201848346 0.5159208606988842 4.6080079695602 0.18307912784136104 1.0000000000176288e-15 14.999999999992344 -0.4501900412226577 STLTSR ddPTM_A549_MK2206_60min_R1 2 STLTSR 6 0 Q9Y2N7-4;Q9Y2N7-3;Q9Y2N7;H0YDZ5;M0R104;Q9Y2N7-6;Q9Y2N7-7;Q9Y2N7-5;Q9Y2N7-2 Q9Y2N7-4 HIF3A Hypoxia-inducible factor 3-alpha 0 ; 132.96 0.031232 231880000.0 10483.3 9465.1 7976.299999999999 5905.8 10557.3 9044.0 7861.6 8064.0 10818.6 11764.7 13173.900000000001 False True 12252.62474792261 9946.833161289187 9107.459278724224 7352.721265121433 9004.335155170738 10001.030077078678 9289.95095780132 9207.096694964257 8368.204373754175 9107.046099060995 9902.45704885663 1.2373317740708947 1.004481323394145 0.9197171200834242 0.7425148353428509 0.9093031265619484 1.0099544009871197 0.9381460492044214 0.9297790083348394 0.8450634355157739 0.9196753951194896 1.0 13.273570823227132 -5.302398255008746 2.4843461567344707 0.9184761325061155 1.2913642376360523 0.6517756952620293 0.06884582578938626 0.25520381850534585 2.070865609894523 0.011097874432441151 0.19269598276152705 4.984272120762136e-06 5.302398255008746 0.37288810512993686 STLTTLPFPGAEANS(ph)PGK ddPTM_A549_PD325901_60min_R1 1 STLTTLPFPGAEANSPGK 18 0 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 STLTTLPFPGAEANS(1)PGK 95.34700000000001 2.9082999999999998e-06 3322600.0 1193.7 1585.9 1564.9 1518.5 1910.3 1683.2 1877.7 1843.5 2056.8 1755.6 1672.3 True False 1314.883545244506 1719.5493587165336 1671.103524508159 1612.2942962362818 1776.1271181772345 1669.4925772631818 1949.1569010168648 1806.7299463022273 1970.35984871467 1644.7511163874285 1466.6177015831242 0.8965414394120359 1.1724591601890424 1.1394268067979165 1.0993282670023063 1.2110361931810953 1.1383283970056182 1.3290149838726677 1.2319024544378352 1.3434720217734908 1.1214586559346857 1.0 10.518277142102848 -5.260762407306344 6.527148137840345 1.1766746169671198 0.890966394332377 0.42372141106732397 0.09456312007765533 0.12239524307216941 31.493805815926383 0.01758202413481505 0.15296630478258996 5.485769969172293e-06 5.260762407306344 -0.2857082226347428 STLTTLPFPGAEANS(ph)PGKAEAEKPR ddPTM_A549_MK2206_60min_R1 3 STLTTLPFPGAEANSPGKAEAEKPR 25 2 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 STLTTLPFPGAEANS(1)PGKAEAEKPR;STLTTLPFPGAEANS(1)PGKAEAEKPR;STLTTLPFPGAEANS(1)PGKAEAEKPR 182.64 1.4115999999999995e-57 187043100.0 6009.1 7092.200000000001 6560.1 5738.5 8313.7 6768.7 7396.799999999999 6198.5 9115.7 9318.3 9150.900000000001 True False 7023.2891716102595 7453.162686764551 7490.420823484422 7144.432757611057 7090.765743091798 7484.95934130058 8740.702814269964 7077.156357110113 7051.008504781674 7213.289558159586 6878.4789780081965 1.0210526475497053 1.0835480795381838 1.0889647038876937 1.0386646205437517 1.030862457494211 1.0881707082672516 1.2707319223066103 1.0288839116521438 1.025082511311743 1.0486750895396848 1.0 12.747873865071316 -8.500100798737767 24.993565894309434 1.0126412771324296 1.089136131661489 0.1774491190961175 0.06410275565830179 833.8217231866222 914929.5400451609 0.01049993409587212 0.012645776930158111 3.161543788056775e-09 8.500100798737767 0.07649485452905935 STLTTLPFPGAEANS(ph)PGKAEAEKPR ddPTM_A549_PD325901_60min_R1 4 STLTTLPFPGAEANSPGKAEAEKPR 25 2 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 STLTTLPFPGAEANS(1)PGKAEAEKPR;STLTTLPFPGAEANS(1)PGKAEAEKPR;STLTTLPFPGAEANS(1)PGKAEAEKPR;STLTTLPFPGAEANS(1)PGKAEAEKPR 187.48 8.269099999999998e-58 291064000.0 13569.4 12700.300000000001 13664.4 12586.3 16535.9 15453.500000000002 14536.099999999999 15090.599999999999 15808.400000000001 14516.0 15794.7 True False 14946.955498735688 13770.598852706735 14591.748354712305 13363.727165438733 15374.47542975811 15327.65181959159 15089.279239959134 14789.606144653324 15144.027923191845 13599.457282683947 13852.052030852703 1.0790426909633537 0.994119775325378 1.0533997650465126 0.9647471100796963 1.1099059832806366 1.1065257180273567 1.0893172510723144 1.067683409772964 1.0932696390008876 0.9817648137903213 1.0 13.75781209123507 -4.939261418487166 20.63880875928597 1.0500104867364044 1.599587059425828 0.028821841955023464 0.050518919001669015 453.25714986732567 536255.239982117 0.006902023102705663 27827.41786306635 1.1501078865441198e-05 4.939261418487166 0.5495765726894235 STMT(ph)LGR ddPTM_A549_MK2206_60min_R1 1 STMTLGR 7 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 S(0.101)T(0.101)MT(0.799)LGR 51.864 0.02301 8481800.0 1313.1 1141.5 1316.2 1210.9 2007.3 1285.5 924.78 1309.5 2189.8 1804.9 1759.2 True False 1534.719177787261 1199.5974742592898 1502.8569515510733 1507.5705543593663 1712.028829054232 1421.530756754161 1092.8005554537888 1495.1256351755587 1693.8137963920387 1397.1718364425087 1322.3420885499795 1.160606768154952 0.9071763537185102 1.1365114704917532 1.140076057030371 1.294694348670067 1.0750098397858208 0.8264128964178281 1.1306647864585826 1.2809195223071197 1.0565887969085097 1.0 10.36887973352835 -8.484060103277706 24.982298334719793 1.136505827700285 1.0761432090864065 0.012621969209617001 0.13464520018774054 1794.8049969988338 1155075.246967352 0.025432337704902306 0.03074275404022933 3.2804989019211965e-09 8.484060103277706 -0.060362618613878594 STNDRDAT(ph)PLSR ddPTM_A549_PD325901_60min_R1 1 STNDRDATPLSR 12 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 STNDRDAT(0.999)PLSR 77.222 0.0001609 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STNGDTFLGGEDFDQALLR ddPTM_A549_MK2206_60min_R1 2 STNGDTFLGGEDFDQALLR 19 0 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 180.49 4.8079999999999995e-35 3535700.0 1743.6100000000001 2065.3999999999996 1762.6299999999999 1715.24 2697.5 2125.98 1850.25 1905.2199999999998 2806.7799999999997 2672.6400000000003 2716.71 False True 2037.8887408283038 2170.520037963325 2012.597438468673 2135.473877000049 2300.701323356643 2350.9497924886905 2186.416474976071 2175.290769491545 2171.0488115066414 2068.888767770906 2042.075929618359 0.997949543046209 1.062898791608092 0.9855644490382907 1.0457367652333796 1.1266482749182682 1.1512548374868983 1.0706832411391716 1.065235008131202 1.0631577308256046 1.013130186671148 1.0 10.995820794975396 -3.9001186850693594 10.356906290995743 1.046510503212691 0.6350970688591405 0.0 0.050654562773073855 0.0 0.0 0.0072582662550079525 0.0 0.0001258581416552314 3.9001186850693594 -0.4114134343535504 STNGDTFLGGEDFDQALLR ddPTM_A549_PD325901_60min_R1 2 STNGDTFLGGEDFDQALLR 19 0 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 166.35 5.096199999999999e-27 5322700.0 2448.0 3033.3 2249.8500000000004 2357.3 2718.1 2620.6 2511.31 3078.1000000000004 3499.2 3252.2 2861.8 False True 2696.5191578776476 3288.9268363672763 2402.5383504471106 2502.9050671832656 2527.190032935946 2599.2587024571612 2606.8792762915614 3016.7048807772653 3352.1407927957844 3046.8555369760766 2509.8167424448875 1.0743888636470278 1.310425092297151 0.9572564840358528 0.9972461434555222 1.0069221350695647 1.0356368488980376 1.0386731557747608 1.2019622109296326 1.335611774400056 1.2139753016421604 1.0 11.293366312416648 -8.256651878607355 24.333449195791598 1.166172464525895 1.0603512622952613 0.2194682595188573 0.11328530684151936 515.4569546694529 2619912.925505873 0.023805700945740797 0.030221492800707603 5.537938409337382e-09 8.256651878607355 -0.10582120223063374 STNS(ph)PTIVSPAIVSPTQDSRPNMSRPLITR ddPTM_A549_MK2206_60min_R1 1 STNSPTIVSPAIVSPTQDSRPNMSRPLITR 30 2 A0A2U3U043 A0A2U3U043 1 S(0.159)T(0.159)NS(0.653)PT(0.029)IVSPAIVSPTQDSRPNMSRPLITR 128.6 5.3086e-28 3830100.0 862.91 829.1 911.61 816.31 1561.5 916.3 992.38 781.51 1155.8 1568.1 1388.5 True False 1008.5481118760216 871.2976486275754 1040.8900057768365 1016.305986645549 1331.8054185065416 1013.2622578092868 1172.6826004252152 892.2914357739985 894.0131454333349 1213.8651209072516 1043.697129349504 0.966322588723235 0.8348184776273377 0.9973104040494802 0.9737556596318064 1.2760458767732785 0.970839364520255 1.1235851545899171 0.8549333045786274 0.8565829303282062 1.163043460379935 1.0 10.027487401379592 -11.573490320332207 2.942260376778488 1.0011215120548818 0.9575994839947679 0.0 0.1327459394396408 1.5061346419485673 23.743797400686656 0.11762098749668584 0.018607133766351664 2.6699902759005858e-12 11.573490320332207 -0.04352202806011385 STNSPT(ph)IVSPAIVSPTQDSRPNMSRPLITR ddPTM_A549_PD325901_60min_R1 1 STNSPTIVSPAIVSPTQDSRPNMSRPLITR 30 2 A0A2U3U043 A0A2U3U043 1 S(0.249)T(0.249)NS(0.23)PT(0.271)IVSPAIVSPTQDSRPNMSRPLITR 53.288000000000004 0.0032593000000000006 11925000.0 3192.7 2987.1 2849.1 2849.2 4204.5 4294.5 3605.4 3349.4 3332.0 3650.0 3783.0 True False 3516.820553658482 3238.83340022836 3042.4570590300964 3025.188612997311 3909.1904247375705 4259.527015836937 3742.605469950582 3282.5935894465315 3191.9676273421237 3419.538377087101 3317.7149824128205 1.0600128619550258 0.9762241233491692 0.9170338848147402 0.9118289633177685 1.1782779549961815 1.2838737017545672 1.128067205829947 0.9894139812634698 0.9620982044156046 1.0306908204032128 1.0 11.69597423752565 -4.311529839060043 16.28723750333876 1.0152459195494703 1.0387151249290798 0.0 0.11253257087744295 0.0 0.0 0.01598357122263094 0.0 4.880565672052926e-05 4.311529839060043 0.023469205379609503 STNTS(ph)QTGLVGTK ddPTM_A549_PD325901_60min_R1 2 STNTSQTGLVGTK 13 0 Q96R06 Q96R06 SPAG5 Sperm-associated antigen 5 1 STNT(0.112)S(0.887)QTGLVGTK;S(0.001)T(0.001)NT(0.126)S(0.87)QT(0.002)GLVGTK 119.96 6.2482e-15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STPES(ph)GDS(ph)DKESVGSSSTSNEGGR ddPTM_A549_MK2206_60min_R1 2 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 2 S(0.031)T(0.033)PES(0.937)GDS(0.843)DKES(0.126)VGS(0.006)S(0.006)S(0.006)T(0.006)S(0.006)NEGGR;S(0.004)T(0.004)PES(0.992)GDS(0.98)DKES(0.017)VGS(0.001)S(0.001)STSNEGGR 71.67 2.6450999999999998e-05 20957700.0 1306.67 1769.56 1121.74 1269.32 1543.0300000000002 955.95 1240.24 1392.45 1842.6399999999999 2395.63 1938.0 True False 1527.2039509856681 1859.623045598134 1280.819599477967 1580.3034569819392 1316.0523310394808 1057.1079944917462 1465.5755540734071 1589.8340516992782 1425.2849820914353 1854.4555191627055 1456.7411139210205 1.0483701849225544 1.276563850520221 0.8792362536061493 1.0848210721041116 0.9034222474143973 0.7256663413901964 1.0060645231111844 1.091363480103901 0.978406505089352 1.273016530831056 1.0 10.508528794975826 -5.764863744980641 24.999999374789628 0.9749062759903513 1.1624670154191488 0.1661839194071495 0.14095311099257415 69.39429158186319 506640.192480603 0.01436449302197683 0.047436533334753055 1.7184474461904192e-06 5.764863744980641 0.18756073942879747 STPES(ph)GDS(ph)DKESVGSSSTSNEGGR ddPTM_A549_PD325901_60min_R1 2 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 2 S(0.091)T(0.096)PES(0.818)GDS(0.993)DKES(0.001)VGSSSTSNEGGR;S(0.012)T(0.014)PES(0.974)GDS(0.999)DKES(0.001)VGSSSTSNEGGR 106.65 2.1044e-11 35402000.0 2048.82 1852.89 1675.53 1904.65 1935.85 1324.51 1693.33 1893.2 1871.5 1811.3600000000001 2185.21 True False 2256.814698138433 2009.0395430180208 1789.2415415803932 2022.2959047260017 1799.8825743199475 1313.7236296998908 1757.7705997757303 1855.4386408133319 1792.8473633165622 1696.9904204713687 1916.443023187503 1.1776059454065118 1.0483168655212654 0.9336262648729606 1.0552340352714686 0.9391787559258152 0.6855010108857055 0.9172047269384181 0.9681679123062545 0.9355077827122814 0.8854896284100676 1.0 10.904215391390787 -5.110268158850587 1.2144890094297434 0.9461637190144464 1.3520241264428856 0.4111912987050734 0.08970499532560854 1.710958175562322 1.6499475019873067 0.01353538790204682 0.9474450678828213 7.757679641362337e-06 5.110268158850587 0.4058604074284392 STPES(ph)GDSDKESVGSSSTSNEGGR ddPTM_A549_MK2206_60min_R1 2 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 1 S(0.036)T(0.164)PES(0.657)GDS(0.14)DKES(0.002)VGSSSTSNEGGR;S(0.01)T(0.01)PES(0.972)GDS(0.009)DKESVGSSSTSNEGGR 63.805 8.9462e-05 86871000.0 1222.94 1620.46 1341.23 1215.32 2196.04 1437.94 1375.05 1717.02 2481.4 2528.3 2171.6 True False 1429.3423739876266 1702.9344924557236 1531.4365819243615 1513.0734545577875 1873.0054250765982 1590.1018563726795 1624.878786064503 1960.4128431532156 1919.3668619815512 1957.1552740193895 1632.331786889004 0.8756445138593749 1.0432526684426568 0.9381895238608723 0.92693989464084 1.147441617029516 0.9741290766647333 0.9954341385223494 1.2009891977227793 1.175843586088338 1.1989935439224972 1.0 10.672718613202667 -6.855100044543872 0.9202043850316075 1.0876517159083314 0.9446303424509143 0.3640053064922325 0.08970110085351263 0.6388510923858618 1.024960089633777 0.015965714809736836 0.051981559650047165 1.3960467291858474e-07 6.855100044543872 -0.14302137345741717 STPES(ph)GDSDKESVGSSSTSNEGGR ddPTM_A549_PD325901_60min_R1 1 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 1 S(0.001)T(0.003)PES(0.819)GDS(0.178)DKESVGSSSTSNEGGR 177.78 4.880199999999999e-42 60593000.0 3033.5 2514.0 2363.0 2219.4 2880.5 2724.4 3089.5 2788.0 3210.7 3136.7 3302.8 True False 3341.4586868553283 2725.8636028837677 2523.367389873336 2356.4872973768893 2678.1836171855316 2702.213389671943 3207.0726131392676 2732.391152856311 3075.765444510009 2938.6482266874277 2896.5765381742176 1.153588949857866 0.9410638962787241 0.8711550882973994 0.8135422165858736 0.9246030898509092 0.9328990116640292 1.1071941551942428 0.9433174358923044 1.061862306752211 1.0145246251769093 1.0 11.500133071468976 -7.662338301433789 11.217504348589069 1.027447236186366 0.9298033930507269 0.19113405395410343 0.08672581210806007 0.46727296707011834 49.65041166439595 0.01314661619889896 0.019500401116884065 2.1760140670148727e-08 7.662338301433789 -0.09764384313563912 STPESGDS(ph)DKESVGSSSTSNEGGR ddPTM_A549_PD325901_60min_R1 1 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 1 STPESGDS(1)DKESVGSSSTSNEGGR 245.11 8.660399999999998e-100 60437000.0 2987.2 3439.3 2837.5 3673.3 3916.2 4319.3 4110.9 3950.5 4045.1 4076.4 3555.6 True False 3290.45834493959 3729.1418812244015 3030.0698132736293 3900.191398330414 3641.1396221565637 4284.12505285935 4267.342549070793 3871.7041783927048 3875.0985142141694 3819.0154083172233 3118.2837408054534 1.055214540575985 1.1958956243863694 0.9717107438372371 1.2507493616738654 1.1676742480195392 1.3738727482678532 1.368490780113723 1.2416138171546387 1.242702344082784 1.224717096248198 1.0 11.606536493271351 -4.163389570165853 16.24222381015867 1.1590340457201829 1.1560749064431097 0.0 0.1311374444327103 0.0 0.0 0.01963336589523227 0.0 6.864524032820809e-05 4.163389570165853 -0.0029591392770731417 STPFIVPS(ph)SPTEQEGRQDKPMDTSVLSEEGGEPFQK ddPTM_A549_MK2206_60min_R1 2 STPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQK 36 2 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.001)T(0.001)PFIVPS(0.488)S(0.488)PT(0.021)EQEGRQDKPMDT(0.001)S(0.001)VLSEEGGEPFQK;S(0.001)T(0.001)PFIVPS(0.485)S(0.485)PT(0.025)EQEGRQDKPMDT(0.001)S(0.001)VLSEEGGEPFQK 84.198 1.6686000000000002e-06 31619000.0 1188.26 1327.79 1675.34 1085.21 1903.19 1402.46 1530.25 1078.6399999999999 2495.3999999999996 1883.46 2783.5 True False 1388.8092378322212 1395.3688395503655 1912.9284038987787 1351.0864987169286 1623.2332721405478 1550.867386322397 1808.2766171231647 1231.5405231964596 1930.195884334958 1457.9850778802195 2092.280129308134 0.6637778652954405 0.6669130103585986 0.9142792961147787 0.645748377471663 0.7758202400351197 0.7412331477980585 0.864261239110997 0.5886116805992418 0.9225322447492855 0.6968402832188344 1.0 11.030860307426579 -8.9199465654963 7.253166089199406 0.9661594220888713 0.7397388659067102 0.10158292227177923 0.12202898268801973 0.11391078044327241 8.671650911120592 0.015068772847498203 0.015966915206360857 1.2024123673182215e-09 8.9199465654963 -0.22642055618216106 STPFIVPS(ph)SPTEQEGRQDKPMDTSVLSEEGGEPFQK ddPTM_A549_PD325901_60min_R1 1 STPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQK 36 2 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.471)S(0.471)PT(0.058)EQEGRQDKPMDTSVLSEEGGEPFQK 186.52 1.4119999999999997e-77 14983000.0 1487.3 1429.2 1702.6 1722.4 1757.0 1600.5 2027.1 1699.8 2064.2 2185.2 2414.3 True False 1638.2896011076084 1549.643699777836 1818.1486745655263 1828.788736145784 1633.5943813209435 1587.466058644084 2104.2423997716837 1665.8961555326962 1977.4488524488613 2047.2260990714346 2117.3564055086645 0.7737429545849334 0.7318766437932571 0.8586880649074015 0.8637132281499126 0.7715254631061963 0.7497396538976715 0.9938064249821794 0.7867811725973873 0.9339234751901901 0.9668783648068063 1.0 11.04804841710737 -8.623538661571834 0.37936291166153435 1.0086271066418078 0.7724130269508308 0.5166250805071841 0.06744987650136196 0.5342089528369465 0.20800160049598898 0.037830028901123566 0.03944698856672082 2.379366476614947e-09 8.623538661571834 -0.23621407969097696 STPFIVPS(ph)SPTEQEGRQDKPMDTSVLSEEGGEPFQKK ddPTM_A549_PD325901_60min_R1 2 STPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQKK 37 3 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.324)S(0.324)PT(0.324)EQEGRQDKPMDT(0.009)S(0.009)VLS(0.011)EEGGEPFQKK;STPFIVPS(0.327)S(0.327)PT(0.327)EQEGRQDKPMDT(0.009)S(0.009)VLS(0.002)EEGGEPFQKK 54.583 0.00060624 9661100.0 2267.01 2376.4 2779.3999999999996 2567.5 2979.6 3626.7999999999997 2996.9 3041.7 2758.3 3248.6 3345.8999999999996 True False 2497.155186315443 2576.667567976525 2968.026797889948 2726.088643784427 2770.323175061972 3597.2645432617096 3110.9486694666048 2981.0309073325107 2642.3782432466323 3043.482841590456 2934.375511407629 0.8510005541579613 0.8780974207150773 1.0114679550560235 0.9290183322436173 0.9440929302647566 1.225904636021206 1.060174015688358 1.015899599674106 0.9004908311748674 1.0371824702594004 1.0 11.518837788863706 -5.679953030536129 5.497858898263508 0.9823408935904312 0.8589281072517047 0.25277692825423814 0.08628165801930629 0.24866801735750277 12.35534231364594 0.012881279191295466 0.05179736728674752 2.089522102930638e-06 5.679953030536129 -0.12341278633872654 STPFIVPSS(ph)PTEQEGR ddPTM_A549_MK2206_60min_R1 2 STPFIVPSSPTEQEGR 16 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.017)S(0.982)PT(0.001)EQEGR;STPFIVPS(0.246)S(0.735)PT(0.019)EQEGR 145.39 2.2426e-14 399740000.0 8785.8 10407.7 10041.0 8628.9 13615.2 9817.9 9641.5 9407.400000000001 14161.0 12915.3 13950.9 True False 10268.628247813047 10937.407475119066 11464.964785385448 10742.980887366039 11612.422115946383 10856.823661405431 11393.235748402536 10740.927758954218 10953.556110470205 9997.724759934585 10486.506504747558 0.9792229893877554 1.0429982063299508 1.0933064104995225 1.0244575619633065 1.1073680363130551 1.0353136820627746 1.086466283432378 1.024261774318404 1.044538150575809 0.9533894586732304 1.0 13.356246515261711 -10.279427369936718 0.606977795015875 0.9980701550689917 1.0524012680818862 0.3146743707072006 0.037573346402533084 0.9669596099280505 0.6335750983738182 0.02642248514697476 0.007344911822415836 5.2549989073506244e-11 10.279427369936718 0.054331113012894505 STPFIVPSS(ph)PTEQEGR ddPTM_A549_PD325901_60min_R1 2 STPFIVPSSPTEQEGR 16 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.143)S(0.714)PT(0.143)EQEGR;STPFIVPS(0.105)S(0.858)PT(0.037)EQEGR 180.56 1.7863e-29 591300000.0 9494.3 9486.9 10205.7 9350.900000000001 11671.2 10380.3 9996.4 11005.400000000001 11709.1 11080.099999999999 11445.0 True False 10458.15434666575 10286.39435727845 10898.320173859625 9928.48385556527 10851.45517545418 10295.7662783775 10376.81847223997 10785.88866343072 11217.007246492096 10380.500595058302 10037.3375558326 1.0419251408545702 1.0248130343390838 1.0857779877619753 0.9891551220966882 1.0811089210752411 1.025746740219445 1.0338218092715332 1.0745766597401263 1.117528147688328 1.0341886518528305 1.0 13.293089018919323 -8.240141362914853 23.67554125313118 1.058480917664088 1.0405249257803209 0.043016406676043895 0.036433861007189705 1442.5518115287662 1603579.8284068243 0.007588716055993885 0.00979305629315826 5.7525266203745875e-09 8.240141362914853 -0.017955991883767064 STPFIVPSS(ph)PTEQEGRQDKPMDTSVLSEEGGEPFQK ddPTM_A549_MK2206_60min_R1 1 STPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQK 36 2 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.002)T(0.002)PFIVPS(0.442)S(0.477)PT(0.074)EQEGRQDKPMDT(0.001)S(0.001)VLSEEGGEPFQK 69.143 7.3177e-05 14837000.0 307.53 490.45 685.01 282.75 774.58 614.85 416.65 554.82 678.39 931.79 940.36 True False 359.4335456133701 515.411810118676 782.1547184181738 352.02376269312964 660.6403080799213 679.913018895602 492.349911795044 633.4674340649889 524.7357481662227 721.2979918437401 706.8426593842987 0.5085057343970407 0.7291747368044111 1.1065471332750012 0.49802280326397236 0.9346355929555491 0.9619015064651673 0.6965481005686748 0.8961929867345245 0.7423657035970328 1.0204505660029528 1.0 9.46524530185578 -14.999999998869859 0.2843065658065757 2.6657556663782467 0.7736339379702066 0.20205746906318056 0.17527028299540284 58.648763056385626 0.7732654100499589 55.77364426388313 0.0668093536047012 1.0000000026022465e-15 14.999999998869859 -1.89212172840804 STPFIVPSS(ph)PTEQEGRQDKPMDTSVLSEEGGEPFQK ddPTM_A549_PD325901_60min_R1 2 STPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQK 36 2 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.139)S(0.736)PT(0.125)EQEGRQDKPMDTSVLSEEGGEPFQK;S(0.001)T(0.001)PFIVPS(0.457)S(0.504)PT(0.035)EQEGRQDKPMDT(0.001)S(0.001)VLSEEGGEPFQK 111.68 5.2363e-15 78418000.0 2327.9 2961.3 2624.0 2835.6 2785.7 3570.6000000000004 3487.3 3633.2 3057.0 3822.8999999999996 3064.3 True False 2564.2266942905967 3210.8591436832553 2802.0804193938343 3010.74857188515 2590.042042143285 3541.5222174286573 3620.011109823784 3560.7329758097358 2928.524921003862 3581.5214415798046 2687.410526198153 0.9541626295250756 1.1947780632628608 1.0426692878061705 1.1203158365776067 0.9637686601635017 1.3178195824211516 1.3470257240321855 1.3249680095757685 1.0897199711228378 1.3327035101877565 1.0 11.39200100752827 -9.278227574939013 2.2987407167357317 1.0301879050048925 1.1597240674893883 0.0 0.1595117244159325 0.3853574560053485 4.180477710355162 0.02797018630789825 0.025432080703540916 5.26953659726691e-10 9.278227574939013 0.12953616248449573 STPLAS(ph)PSPSPGR ddPTM_A549_MK2206_60min_R1 2 STPLASPSPSPGR 13 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLAS(0.849)PS(0.151)PSPGR;S(0.001)T(0.009)PLAS(0.495)PS(0.495)PS(0.001)PGR 110.38 5.3911000000000006e-05 8526800.0 3519.7000000000003 3692.2 3075.8 2651.2 4418.0 3163.5 2930.0 3078.8 4718.2 4413.0 5588.299999999999 True False 4113.739311596849 3880.117209338719 3511.9946904579756 3300.7441190168884 3768.118052489212 3498.2594702386546 3462.3430734656886 3515.229328429561 3649.5352334171685 3416.1002350383937 4200.570880766172 0.9793286266000384 0.9237118761893137 0.8360755692848582 0.7857846499223557 0.897049034392658 0.8328057232069803 0.8242553623649762 0.8368456165149613 0.8688188670087394 0.8132466590863257 1.0 12.036369696096676 -10.432979118770811 0.7958605269317428 0.9995126953820549 0.8617191007790996 0.0 0.07425055863880073 0.43239913609212693 0.4986799537740315 0.034450276796531946 0.010340333577893558 3.6899533973737545e-11 10.432979118770811 -0.13779359460295526 STPLASPSPSPGRS(ph)PQR ddPTM_A549_MK2206_60min_R1 4 STPLASPSPSPGRSPQR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLASPSPS(0.047)PGRS(0.953)PQR;STPLAS(0.005)PS(0.017)PS(0.078)PGRS(0.9)PQR;STPLASPSPS(0.044)PGRS(0.956)PQR;STPLASPS(0.058)PS(0.233)PGRS(0.708)PQR 143.4 8.513299999999999e-17 281263700.0 17789.699999999997 18553.750000000004 16527.68 17006.07 25333.9 19941.2 20401.0 20082.49 28702.3 29845.3 32966.7 True False 20792.166443593032 19498.05662552632 18871.553548861582 21172.557913431483 21607.3168696144 22051.364548102734 24107.59762517869 22929.24445754623 22201.274878154712 23103.226001538937 24780.158555366423 0.8390651091734138 0.7868414797250679 0.761559031460464 0.8544157563046071 0.8719603961103425 0.8898798810682856 0.972858893187264 0.9253066079587551 0.895929492482879 0.9323276100077929 1.0 14.596897798113881 -2.0000000000043068 0.0953043258709049 1.0674479412908948 0.24952220830338478 0.6653533784894651 0.04016896349968852 47.16803581738244 0.31099945912997734 0.31652098761615743 5.0588606957941415 0.009999999999900833 2.0000000000043068 -0.81792573298751 STPLASPSPSPGRS(ph)PQR ddPTM_A549_PD325901_60min_R1 3 STPLASPSPSPGRSPQR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLASPS(0.012)PS(0.07)PGRS(0.917)PQR;STPLASPSPS(0.011)PGRS(0.989)PQR;STPLASPSPS(0.011)PGRS(0.989)PQR 98.684 2.68e-07 228224000.0 22381.4 18870.7 17191.600000000002 16933.9 19030.5 17194.3 15297.399999999998 16701.1 20474.5 21025.6 27002.800000000003 True False 24653.54325168417 20461.000115727424 18358.325357488964 17979.86854332274 17693.86333166091 17054.275321552002 15879.550928058483 16367.983458740502 19614.027966991678 19698.040027748648 23681.62678485249 1.0410409502548763 0.8640031490072684 0.7752138619645641 0.7592328308637659 0.7471557377544036 0.7201479643476372 0.6705430784938955 0.6911680353483983 0.8282382010824283 0.8317857639893274 1.0 14.53148056836372 -10.02406320396132 0.9228175293713152 0.9819689703488917 0.7813015512425248 0.1218655359467875 0.10667690997588515 0.3932334947957035 0.6761219178063924 0.0406855187859709 0.020102380903906814 9.460994631269334e-11 10.02406320396132 -0.20066741910636698 STPS(ph)PTPVESSDPK ddPTM_A549_MK2206_60min_R1 2 STPSPTPVESSDPK 14 0 Q9NW07 Q9NW07 ZNF358 Zinc finger protein 358 1 S(0.001)T(0.002)PS(0.992)PT(0.006)PVESSDPK;S(0.048)T(0.048)PS(0.897)PT(0.006)PVESSDPK 155.64 6.163800000000001e-19 14061200.0 5269.0 5795.1 5544.3 5512.200000000001 7479.1 6582.0 5577.700000000001 5274.1 10014.099999999999 10396.4 8550.0 True False 6158.278385318009 6090.045837126595 6330.565109014291 6862.689247452058 6378.934297503858 7278.502871222007 6591.095891081762 6021.719826253846 7745.922339231668 8047.846019386616 6426.799032004506 0.9582186022389522 0.9476017231593938 0.985026150263765 1.0678238440749248 0.9925523212625307 1.132523801503072 1.0255643374344026 0.9369703014310193 1.2052535485640865 1.2522324067252664 1.0 12.649884644221368 -6.185360411794856 0.6616400110959115 1.0840847212858005 0.9221643684236698 0.270287171391994 0.08705363870088113 1.5112971477396522 0.852362853642007 0.015809913881134105 0.14609155602723162 6.525887582740359e-07 6.185360411794856 -0.1619203528621307 STPS(ph)PTPVESSDPK ddPTM_A549_PD325901_60min_R1 2 STPSPTPVESSDPK 14 0 Q9NW07 Q9NW07 ZNF358 Zinc finger protein 358 1 S(0.006)T(0.009)PS(0.758)PT(0.226)PVESSDPK;S(0.014)T(0.014)PS(0.972)PTPVESSDPK 187.63 3.1888e-26 26772000.0 10028.3 9580.0 9856.2 10243.6 13089.9 11211.3 11147.900000000001 11231.6 12227.2 13023.6 14453.599999999999 True False 11046.365633555726 10387.34022101293 10525.101002145395 10876.323907096461 12170.510581703484 11119.99888989467 11572.139434864956 11007.57692698025 11713.333305233373 12201.287673378522 12675.898828919364 0.8714463394385928 0.8194559108751157 0.8303238408729611 0.8580317698878069 0.9601299873060785 0.8772552573964227 0.9129245658275339 0.8683863034522704 0.9240633317859913 0.9625579880412075 1.0 13.629800429740486 -14.999999989721072 0.059032670948271464 1.4929702789833454 0.6718639790673514 0.61179771068519 0.034480799077595596 104.70161135428101 0.4677832845578137 7.461885889665288 1.3599345943560057 1.0000000236681065e-15 14.999999989721072 -0.821106299915994 STPS(ph)PVLQPR ddPTM_A549_MK2206_60min_R1 2 STPSPVLQPR 10 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 S(0.009)T(0.008)PS(0.983)PVLQPR;S(0.001)T(0.004)PS(0.996)PVLQPR 118.9 6.2568e-05 19304600.0 3587.5 4081.8999999999996 3494.3 3295.9 5110.9 3464.2 2971.3 3381.7 5362.700000000001 5257.1 4734.2 True False 4192.982294045996 4289.651274795439 3989.844283395315 4103.395647958575 4359.09338036829 3830.779344650145 3511.1467488698313 3861.0663310219047 4148.057012472181 4069.517458785484 3558.567482726988 1.1782781454611746 1.2054432845849 1.1211939362571346 1.1531032270361994 1.2249573463274177 1.076494787086223 0.9866742069421661 1.0850057922923262 1.1656536043243606 1.1435830509154619 1.0 11.797080879368727 -7.287076616460175 20.569606290469157 1.072874297006609 1.173814832393858 0.4507468591021334 0.05505608403916245 72.94884725007334 58529.08609733873 0.010283737008553619 0.016449585332297467 5.1632527323929064e-08 7.287076616460175 0.10094053538724901 STPS(ph)PVLQPR ddPTM_A549_PD325901_60min_R1 2 STPSPVLQPR 10 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 S(0.008)T(0.008)PS(0.985)PVLQPR;S(0.124)T(0.028)PS(0.848)PVLQPR 128.88 1.4062e-06 26625000.0 6681.4 6853.9 6159.8 6805.6 7714.900000000001 7345.2 6903.8 7302.3 7812.6 7074.7 8594.1 True False 7359.690809413281 7431.50220676414 6577.841069886484 7225.966455360973 7173.032038960129 7285.383126493296 7166.527886904318 7156.649897956474 7484.263591048341 6628.002234624142 7537.080182488505 0.9764644439517353 0.9859921915160645 0.8727306742960361 0.9587222479269403 0.9516990486084788 0.966605495775407 0.9508360947990018 0.9495255091731789 0.9929924333878156 0.8793859258686811 1.0 12.879790025388301 -8.784169660354946 5.475006515944381 0.9968832995716914 0.9507252287942113 0.0 0.04485438039423567 0.13781110632941504 11.604123953575543 0.004701065878457541 0.0050768595171648175 1.6437294626861317e-09 8.784169660354946 -0.04615807077748013 STPSES(ph)PR ddPTM_A549_MK2206_60min_R1 2 STPSESPR 8 0 A8K855-2;A8K855 A8K855-2 EFCAB7 EF-hand calcium-binding domain-containing protein 7 1 STPS(0.001)ES(0.999)PR;STPSES(1)PR 125.82 0.0010890999999999997 14599900.0 2738.0 2814.6 2472.4 2415.5 1641.36 1893.81 1453.1100000000001 1695.6100000000001 1878.5900000000001 3672.8 3939.3 True False 3200.107462326952 2957.851117871396 2823.0234972001754 3007.2976084359148 1399.9181182964444 2094.211717190662 1717.1212776394973 1935.9679100878413 1453.0923644917887 2843.1119291296172 2961.0630908509193 1.0807292395135486 0.9989152635790006 0.9533817451991287 1.0156141615921155 0.47277551181597777 0.7072499480545852 0.5799002672199224 0.6538083960688265 0.49073333458565865 0.9601659410480827 1.0 11.531899514754743 -6.724999224854962 24.9618349584272 0.7118338516594414 1.00701594318688 0.47569751857663256 0.15954116401811122 159.11458047625547 108994.17724984509 0.02892149275263061 0.060203484555985703 1.8836524515001633e-07 6.724999224854962 0.2951820915274386 STPSES(ph)PR ddPTM_A549_PD325901_60min_R1 2 STPSESPR 8 0 A8K855-2;A8K855 A8K855-2 EFCAB7 EF-hand calcium-binding domain-containing protein 7 1 STPSES(1)PR;STPSES(1)PR 131.5 0.001072 25485000.0 2567.3 2430.8 2567.3 2339.5 2859.5 2315.9 2712.8 2985.4 2566.3 3294.3 3628.8 True False 2827.9304060536306 2635.6520468933422 2741.532416429036 2484.0056016099975 2658.658584739463 2297.040078234197 2816.03708850112 2925.853854999007 2458.4473355486475 3086.2973357912465 3182.480604858484 0.8885931313254243 0.8281753682550854 0.8614451293886028 0.7805249772199174 0.8354044894038517 0.7217766149862648 0.8848560095549556 0.9193626665099853 0.7724940512741845 0.9697772646531133 1.0 11.635936006531141 -10.913607811987069 1.031662134803876 1.0054837930694276 0.827700620227275 0.5267572462005772 0.055388250177136944 0.3335916884111479 0.5973464868764857 0.045386419282905856 0.009474839073068522 1.2200909001261893e-11 10.913607811987069 -0.17778317284215261 STPSS(ph)SPSLRK ddPTM_A549_MK2206_60min_R1 1 STPSSSPSLRK 11 1 M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6;S4R3I2;M0R0J9 M0QZ12 GRAMD1A GRAM domain-containing protein 1A 1 S(0.002)T(0.003)PS(0.065)S(0.462)S(0.462)PS(0.006)LRK 42.208999999999996 0.033714999999999995 4291500.0 1338.2 1516.3 1359.9 1397.6 2115.3 1482.5 1726.2 1598.8 2406.5 2463.8 2419.2 True False 1564.0554441511788 1593.473193359054 1552.7542686630472 1740.0120627406473 1804.1421721209663 1639.3771659961437 2039.8281957052811 1825.4347961196495 1861.4315923908307 1907.2258688165846 1818.445873476643 0.8601055807951538 0.8762829934071839 0.8538908368465065 0.9568676682215236 0.9921341066213151 0.9015265122309403 1.1217425964982848 1.0038433492824532 1.0236387123428667 1.0488219070112905 1.0 10.828490268894456 -6.553385230598454 1.0300716287267495 1.014663549811148 0.8530375772225952 0.6463375367212953 0.04869936647926146 0.2632607740183817 0.5123528478701905 0.00708592577361738 0.02802417961869889 2.7964996505926385e-07 6.553385230598454 -0.16162597258855282 STPSSS(ph)TPSSR ddPTM_A549_PD325901_60min_R1 1 STPSSSTPSSR 11 0 H3BUV9;Q96S82 H3BUV9 UBL7 Ubiquitin-like protein 7 1 S(0.005)T(0.005)PS(0.074)S(0.074)S(0.421)T(0.421)PS(0.001)SR 55.401 0.017111 2676400.0 193.63 270.6 197.88 327.1 308.37 232.74 233.07 392.67 213.97 451.68 385.09 True False 213.28717505712794 293.40441167078257 211.30932674910514 347.3042241020008 286.7111550187475 230.84464260470105 241.93960639079765 384.83788880634427 204.97758500071845 423.16084771580915 337.7263712866385 0.6315384085778268 0.8687636993018868 0.6256820453317831 1.0283598013944646 0.8489451206503715 0.6835256652456562 0.7163775972515225 1.1394961173456035 0.6069339039762099 1.2529695152430365 1.0 8.399711026031635 -11.156417198702437 1.544081282653218 0.9999618516156762 0.776125890786276 0.2777857946824853 0.18178172277589924 0.5228618384710594 2.236476983177219 0.11827404678763695 0.0251763574281994 6.975619793019348e-12 11.156417198702437 -0.22383596082940016 STPVPEVVQELPLT(ph)SPVDDFRQPR ddPTM_A549_MK2206_60min_R1 1 STPVPEVVQELPLTSPVDDFRQPR 24 1 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 S(0.001)T(0.001)PVPEVVQELPLT(0.499)S(0.499)PVDDFRQPR 41.76 0.029708999999999996 3950200.0 3075.3 3366.1 3470.7 3026.6 4540.8 4269.9 3533.5 3199.4 5540.8 5008.5 4625.7 True False 3594.335456133699 3537.4201122244363 3962.8974485247713 3768.117135869238 3872.854335161386 4721.737983869773 4175.491211635158 3652.924747751569 4285.8176468394395 3877.076371445682 3477.011027174649 1.0337428981507677 1.0173738548936597 1.1397425597884698 1.0837230904416015 1.113845859243188 1.3579876356350142 1.2008852370618106 1.0505933743672549 1.2326154888044778 1.1150601309988133 1.0 11.763631927173401 -5.76111381443535 24.998861251978948 1.130574124142094 1.025558343606731 0.185672690402661 0.09217231653494072 13.587133188653775 1042817.6843831759 0.015324393928085824 0.05287550831769807 1.733349683742889e-06 5.76111381443535 -0.10501578053536287 STPVPEVVQELPLTS(ph)PVDDFRQPR ddPTM_A549_PD325901_60min_R1 1 STPVPEVVQELPLTSPVDDFRQPR 24 1 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 STPVPEVVQELPLT(0.122)S(0.878)PVDDFRQPR 147.28 2.0231e-28 5960500.0 960.08 1374.8 1451.3 1562.9 1868.1 1619.6 1182.7 1863.5 1501.7 1436.5 1224.3 True False 1057.5466148264593 1490.659220861019 1549.793945375866 1659.436783396565 1736.8911005951375 1606.4105145766687 1227.7082956982736 1826.3310306125306 1438.588771302421 1345.799144845377 1073.7188614771396 0.9849380995054592 1.3883142732635665 1.4433889549483923 1.5455039889246611 1.6176404857093194 1.4961183715881576 1.1434169033868764 1.700939693003069 1.3398188510196436 1.2533999290968312 1.0 10.06840057756817 -10.148362711324586 0.7692555463890007 1.0136694520789247 1.4216262769536665 0.18073925524868262 0.2064136520287487 0.47506987078382346 0.5495541396618736 0.10101044054880384 0.03916051008034902 7.106197748114697e-11 10.148362711324586 0.40795682487474183 STPVRPKSLFT(ph)SQPSGEAEAPQTTDSPTTK ddPTM_A549_PD325901_60min_R1 1 STPVRPKSLFTSQPSGEAEAPQTTDSPTTK 30 2 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 S(0.183)T(0.183)PVRPKS(0.183)LFT(0.212)S(0.212)QPS(0.027)GEAEAPQTTDSPTTK 85.861 3.7021000000000003e-07 3664200.0 1016.2 872.96 1082.8 953.11 1110.4 991.14 1258.7 1416.1 1138.5 1184.2 812.34 True False 1119.3638759130986 946.5274028533865 1156.2853194053523 1011.9814400301368 1032.4093346720413 983.0684844514197 1306.6005172870684 1387.8547745910403 1090.6528042403982 1109.4294099031633 712.4273298475371 1.5711972702572317 1.3285950204295898 1.6230221258535984 1.4204697063582692 1.4491433601978492 1.3798859803171801 1.834012344201741 1.948065039683483 1.5308969189514434 1.5572527378204126 1.0 9.47659905135635 -10.389787209338374 0.9248944495958098 1.024263016973879 1.5586692613177204 0.019939857671122163 0.23835031967258308 0.31975232578102053 0.522688154098624 0.10141780056383393 0.036479733675702584 4.0757993025841395e-11 10.389787209338374 0.5344062443438415 STQAPLIIRPDSGNPLDTVLK ddPTM_A549_MK2206_60min_R1 1 STQAPLIIRPDSGNPLDTVLK 21 1 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 120.52 8.4647e-15 2008700.0 1527.3 1583.8 1658.0 1201.9 2177.6 1462.0 1612.7 1602.7 2434.0 2131.5 2098.6 False True 1785.0709011000552 1664.4086550432432 1893.1293311591535 1496.365553955342 1857.2779246492769 1616.7078696029428 1905.7067148730782 1829.887633062899 1882.7028862993068 1649.992669608958 1577.4597015865097 1.1316110955511214 1.0551196036065364 1.200112642659057 0.948591937055756 1.177385338453555 1.024880615319022 1.2080858312617675 1.16002179404172 1.1935030000486242 1.0459808690830577 1.0 10.623387434678847 -5.003550171542174 16.90233889453478 1.101688677124114 1.1576313458322118 0.009845223943145909 0.08713675487958125 23937942.193701003 833113898.952587 0.012602406839112679 24439199.054540683 9.918587488870137e-06 5.003550171542174 0.05594266870809794 STQAPLIIRPDSGNPLDTVLK ddPTM_A549_PD325901_60min_R1 2 STQAPLIIRPDSGNPLDTVLK 21 1 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 ; 148.88 7.0065e-22 6129000.0 6307.6 6263.4 6315.799999999999 6603.6 6772.799999999999 7110.1 6716.299999999999 6969.0 7103.3 8223.5 7654.4 False True 6947.942908590302 6791.2386994042145 6744.42816799069 7011.489374136265 6297.101892891566 7052.197702946146 6971.892471800384 6829.997827925262 6804.773003391148 7704.266806568708 6712.957325239416 1.0350047783660692 1.0116612351862384 1.0046880743056343 1.0444710184249835 0.938051828396955 1.0505351607750064 1.038572440433581 1.017435013663173 1.013677381473367 1.1476710536505514 1.0 12.712732755787018 -10.1074933208227 0.9204621221124472 1.001264931153963 1.0165687811093895 0.0 0.05261981916866557 1.4023338786004018 2.374268129620144 0.011407706345994164 0.005269142198827599 7.807404473449778e-11 10.1074933208227 0.015303849955426552 STQIENQHQGAQDTSDLMS(ph)PSKR ddPTM_A549_MK2206_60min_R1 6 STQIENQHQGAQDTSDLMSPSKR 23 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 STQIENQHQGAQDT(0.006)S(0.006)DLMS(0.763)PS(0.225)KR;STQIENQHQGAQDTSDLMS(0.757)PS(0.242)KR;STQIENQHQGAQDT(0.094)S(0.068)DLMS(0.788)PS(0.049)KR;STQIENQHQGAQDT(0.021)S(0.021)DLMS(0.842)PS(0.117)KR;STQIENQHQGAQDT(0.001)S(0.001)DLMS(0.97)PS(0.028)KR;STQIENQHQGAQDT(0.009)S(0.055)DLMS(0.898)PS(0.038)KR 119.89 9.6273e-16 92594900.0 11764.39 12572.659999999998 12029.599999999999 9945.899999999998 15562.3 11338.8 11622.61 13024.5 17837.5 18973.8 20582.9 True False 13749.931420279234 13212.554691827248 13735.578167739544 12382.645946488412 13273.10628525416 12538.664289913722 13734.287791499342 14870.762760858388 13797.334730634293 14687.605402123607 15471.597870859132 0.88872083769559 0.8539877265497697 0.8877931214597172 0.8003469357105781 0.8579014524578714 0.810431113487663 0.8877097185525985 0.9611652839599444 0.8917847300453481 0.9493269877307127 1.0 13.917334582239462 -10.231512721875756 0.3326044882227535 1.0331478300871275 0.8480817171206116 0.5454487821716265 0.039309966373660576 1.1062536911447562 0.20136393170528627 0.07612661489614937 0.01774916483179914 5.867961802282783e-11 10.231512721875756 -0.18506611296651587 STQIENQHQGAQDTSDLMS(ph)PSKR ddPTM_A549_PD325901_60min_R1 4 STQIENQHQGAQDTSDLMSPSKR 23 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 STQIENQHQGAQDTSDLMS(0.948)PS(0.052)KR;STQIENQHQGAQDTSDLMS(0.981)PS(0.019)KR;STQIENQHQGAQDT(0.001)S(0.003)DLMS(0.908)PS(0.088)KR;STQIENQHQGAQDT(0.005)S(0.028)DLMS(0.955)PS(0.012)KR 167.62 1.2684999999999998e-40 261495000.0 26459.3 26668.200000000004 26723.6 27729.8 32896.3 30199.300000000003 28133.899999999998 31578.1 32795.7 33147.1 35477.2 True False 29145.42865769285 28915.622806056028 28537.22419806137 29442.606767054902 30585.777374074074 29953.366913346006 29204.5509599608 30948.25002295979 31417.41077911886 31054.186449080527 31113.72930850017 0.9367385172220553 0.9293525221406479 0.9171907332325184 0.9462898669305861 0.9830315443966449 0.9627057758441976 0.9386387170239414 0.9946814705527707 1.0097603687300747 0.9980862834271886 1.0 14.925263706997319 -7.586884607988791 0.5628051447149176 1.0063215024393175 0.9267959443110717 0.7075300419189621 0.017050799967990343 0.3263312634102426 0.20635048660713912 0.004447134481152698 0.010523591731429312 2.5889006944975827e-08 7.586884607988791 -0.0795255581282458 STQKS(ph)PATAPK ddPTM_A549_MK2206_60min_R1 2 STQKSPATAPK 11 1 Q07960;H0YE29 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.13)T(0.13)QKS(0.738)PAT(0.002)APK;S(0.143)T(0.143)QKS(0.673)PAT(0.042)APK 64.55 0.0051055 161977200.0 4378.75 4310.09 4584.1 3673.35 5265.78 4369.0599999999995 3836.9 4304.58 6087.360000000001 6086.1900000000005 5648.38 True False 5117.775949840806 4529.455171117145 5234.194310595101 4573.320914902949 4491.190737536588 4831.391029252689 4534.015064361946 4914.767397223373 4708.582679516411 4711.31545195747 4245.731358642525 1.2053932567879417 1.0668256628854007 1.2328133526254508 1.077157391409984 1.0578132147702681 1.1379408212952538 1.0678996576485218 1.1575785140571768 1.1090156869985934 1.109659338753784 1.0 12.05179737474304 -14.999999999252303 0.17639717123648535 0.4866095867078238 1.149444881895404 0.055385466564569996 0.06336349774887712 34.499887106366224 0.3786399865331558 6.088475628180333 0.06073305949145703 1.000000001721636e-15 14.999999999252303 0.6628352951875802 STQKS(ph)PATAPK ddPTM_A549_PD325901_60min_R1 3 STQKSPATAPK 11 1 Q07960;H0YE29 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.111)T(0.111)QKS(0.705)PAT(0.073)APK;S(0.001)T(0.01)QKS(0.987)PAT(0.002)APK;S(0.28)T(0.28)QKS(0.437)PAT(0.002)APK 103.79 5.7345e-05 316596300.0 11501.15 12397.32 11862.55 11967.82 13521.320000000002 13656.69 12736.859999999999 14049.4 12530.759999999998 13017.6 13302.6 True False 12668.738281300872 13442.085664798316 12667.613978308043 12707.045060508726 12571.629129221688 13545.474444501146 13221.568177177229 13769.173695458916 12004.135734091707 12195.66651440249 11666.46453212921 1.085910666972965 1.1521987340534128 1.0858142964753108 1.089194162080018 1.077586881149784 1.1610607829987551 1.1332969076248673 1.1802353367242395 1.0289437473565841 1.0453609558247803 1.0 13.510079804798377 -8.891729434744319 6.77184481915062 1.0126678670816138 1.119690918720045 0.6063352188695532 0.034220106115378394 0.09046577368888706 5.127051735116397 0.005884740155307826 0.006240749327494224 1.2831297229053082e-09 8.891729434744319 0.10702305163843118 STQS(ph)EDFSR ddPTM_A549_MK2206_60min_R1 2 STQSEDFSR 9 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.034)T(0.139)QS(0.826)EDFS(0.001)R;STQS(1)EDFSR 95.477 0.00091861 7192000.0 2087.2 2486.3999999999996 2094.0 1940.9499999999998 2873.6 2469.1 2060.79 2488.7 2876.7 2813.2 3759.8999999999996 True False 2439.468332859318 2612.947139726936 2390.96068724202 2416.482837132558 2450.897246634902 2730.3785231440684 2435.208867702168 2841.480846324102 2225.132043145939 2177.696166147746 2826.213062039032 0.8631579712179629 0.9245400408141093 0.8459944932520445 0.855025004869638 0.8672018679535256 0.9660908300997584 0.8616508431056624 1.0054022056900602 0.7873192835435308 0.7705350298595678 1.0 11.464654516066542 STQS(ph)EDFSR ddPTM_A549_PD325901_60min_R1 2 STQSEDFSR 9 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.001)T(0.003)QS(0.995)EDFS(0.001)R;S(0.004)T(0.013)QS(0.983)EDFSR 83.137 0.0014572 8640000.0 2726.0 2247.7 2834.3 2687.5 2731.0 3416.7 2625.7 2416.1 3009.5 2922.7 3089.2 True False 3002.741513224867 2437.1215673038346 3026.652642030466 2853.5007712446545 2539.1839814385294 3388.875528003274 2725.6224503381713 2367.9089901062184 2883.021180818162 2738.160223208897 2709.2479840522574 1.1083302565509812 0.8995564753207272 1.1171560004276397 1.0532445859668542 0.9372283365661637 1.2508546829052132 1.006043915648291 0.8740096897901927 1.064140749679913 1.0106716842927739 1.0 11.403676737629237 -4.897745873486083 19.98478513466215 1.0275036034628178 10.04406564155182 0.05603970028258387 0.09977651781046604 1204.3974090570157 238004.47373304053 0.01231128526519346 5499.074277865034 1.265476621881506e-05 4.897745873486083 9.016562038089003 STRPGSS(ph)DINVAPGEQGPDQEETNTLVANTSNSNGLK ddPTM_A549_MK2206_60min_R1 1 STRPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLK 37 1 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 S(0.087)T(0.087)RPGS(0.381)S(0.446)DINVAPGEQGPDQEETNTLVANTSNSNGLK 78.366 5.4449e-06 5278000.0 782.08 1177.0 754.51 1026.5 1169.1 881.12 815.13 973.16 1592.7 1134.4 1183.6 True False 914.0759839797888 1236.9042726265307 861.5108634818416 1277.9925460813365 997.1269386974052 974.3595335598806 963.2285697863772 1111.108410177508 1231.95599301927 878.138252124984 889.6794543018171 1.0274217074026026 1.3902808102916133 0.9683384946299777 1.436464043203348 1.1207710078905984 1.095180437008649 1.082669230056884 1.2488862194187218 1.3847189423813961 0.9870276849476195 1.0 9.797141825867305 -11.145315779088003 1.5393768183202625 1.0006302669864657 1.2213852399589151 0.19230948314069818 0.15072092457584055 0.4804201703436668 2.0499543573183634 0.1062897117088831 0.02301119931126131 7.156228857138793e-12 11.145315779088003 0.2207549729724494 STRPHS(ph)LDR ddPTM_A549_MK2206_60min_R1 1 STRPHSLDR 9 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 S(0.072)T(0.072)RPHS(0.856)LDR 61.11 0.0021697 15952000.0 2196.3 2189.1 1908.3 1965.6 3327.1 2613.7 1840.2 2208.8 3092.9 3311.2 3357.6 True False 2566.981745620409 2300.515839597909 2178.9256348920453 2447.172088239138 2837.6879973827204 2890.2799991663555 2174.5405200653795 2521.9041641663016 2392.3630883463957 2563.197620271724 2523.8152549541896 1.0171036650093483 0.9115230740768567 0.8633459325578074 0.9696320217715607 1.1243643891177875 1.1452026821269126 0.8616084381758166 0.9992427770677206 0.9479152975441619 1.0156042979929802 1.0 11.301390592559292 -6.511292002936734 24.87724632353714 0.9917366726499214 0.9267015802039956 0.134622392410376 0.08152341959173344 937.2318273764963 2012276.6721441103 0.011820727356086266 0.026098204757039736 3.081115629789985e-07 6.511292002936734 -0.06503509244592576 STRPHS(ph)LDR ddPTM_A549_PD325901_60min_R1 2 STRPHSLDR 9 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 S(0.005)T(0.005)RPHS(0.99)LDR;S(0.136)T(0.091)RPHS(0.773)LDR 89.301 0.00030507 52134000.0 8449.8 9091.9 8546.099999999999 9612.5 11478.5 9776.8 8759.3 9844.1 9525.4 10555.6 10330.8 True False 9307.61747558601 9858.10632102583 9126.089737874105 10206.242293428562 10672.289758675273 9697.180982287708 9092.63995477288 9647.751702952952 9125.08056347078 9889.117614570034 9060.177092336871 1.0273107667463173 1.0880699373264846 1.0072749842376683 1.1264947902686182 1.177933902384969 1.070308105841509 1.0035830273630595 1.0648524421352705 1.0071635985116454 1.091492750504213 1.0 13.145323534463314 -7.695166867642101 4.980543702374054 1.00903681067494 1.0870376819867946 0.11274707634206071 0.05210616547840425 0.16441783658853987 7.863428623563994 0.007198895708725825 0.01067773521193631 2.0175910019063227e-08 7.695166867642101 0.07800087131185451 STS(ph)DIGSK ddPTM_A549_MK2206_60min_R1 1 STSDIGSK 8 0 Q6ZVL6;A0A590UJI0 Q6ZVL6 KIAA1549L UPF0606 protein KIAA1549L 1 S(0.012)T(0.146)S(0.843)DIGSK 52.49 0.027017000000000003 7616100.0 3711.4 3994.1 3318.3 3620.6 4803.7 3447.3 2785.8 3122.4 4755.4 5953.4 5800.0 True False 4337.79358498183 4197.382629819561 3788.884836903149 4507.6471625349095 4097.082093422912 3812.0909978674617 3291.943800020722 3565.009761948958 3678.309492813361 4608.5228051841295 4359.6999281434055 0.9949752635450521 0.9627686994519901 0.869070096417544 1.033935187473902 0.939762405888258 0.8743929767411435 0.7550849494870185 0.8177190679880417 0.8437070333828647 1.0570733952202729 1.0 12.090013124463042 -7.011930310787496 23.107397125054774 0.8983055326629984 0.9617364947278191 0.13898001832563245 0.08581889644934863 405.31566170215797 785048.4433402462 0.01324839910674402 0.023797996984235997 9.729033285171321e-08 7.011930310787496 0.06343096206482068 STS(ph)DIGSK ddPTM_A549_PD325901_60min_R1 1 STSDIGSK 8 0 Q6ZVL6;A0A590UJI0 Q6ZVL6 KIAA1549L UPF0606 protein KIAA1549L 1 S(0.005)T(0.027)S(0.968)DIGS(0.001)K 57.888000000000005 0.015756 7072500.0 4534.1 4885.2 4487.6 5465.2 6198.7 5030.4 4782.0 5273.4 5875.3 5366.5 5822.1 True False 4994.398494171998 5296.892948610888 4792.155522131009 5802.772991630248 5763.32469635409 4989.4340902238055 4963.981626810807 5168.2179000977285 5628.3815729061125 5027.65827414738 5106.018609332722 0.9781395009104147 1.037382225542478 0.9385307592439954 1.1364574702144654 1.128731627773536 0.9771672357605935 0.9721824393153794 1.012181563665146 1.1023033802929394 0.984653339288244 1.0 12.31798308044533 -6.232680424825792 24.888125201193386 1.046640813439458 0.9899539878253159 0.1282732519695967 0.06068810958451328 1102.370378373564 953994.5181493439 0.008904894079317596 0.02355493139587784 5.852205597250476e-07 6.232680424825792 -0.05668682561414218 STS(ph)DTDLVTSDSR ddPTM_A549_MK2206_60min_R1 2 STSDTDLVTSDSR 13 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 ST(0.001)S(0.987)DT(0.012)DLVTSDSR;S(0.026)T(0.07)S(0.904)DTDLVTSDSR 246.68 2.4567999999999996e-57 114820000.0 2533.8 2930.6000000000004 3047.2 3270.4 4140.8 3663.8 2929.3 3045.7 4584.0 3858.8999999999996 4833.0 True False 2961.44349453763 3079.7550223953367 3479.338780402999 4071.6481468138363 3531.6938052845935 4051.500884166393 3461.515892526634 3477.43730206506 3545.7313191438056 2987.1718098775555 3632.832715985704 0.8151885115728748 0.8477558046764343 0.957748141028548 1.1207915324306552 0.972159766604153 1.1152456501336838 0.952842083065037 0.9572247262482384 0.9760238349377822 0.8222706750941159 1.0 11.82687921898847 -5.791108302173275 3.6244661915918432 0.9996574823268278 0.8247050182509031 0.3753424809184327 0.07703966472178315 0.10940746431423794 2.971429956239471 0.007391210895516666 0.0288580742836466 1.6176765792909684e-06 5.791108302173275 -0.17495246407592469 STS(ph)DTDLVTSDSR ddPTM_A549_PD325901_60min_R1 2 STSDTDLVTSDSR 13 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.002)T(0.061)S(0.936)DT(0.002)DLVTSDSR;ST(0.052)S(0.947)DTDLVTSDSR 318.31 1.0742999999999996e-155 169232000.0 4957.1 4298.7 3593.2 4468.200000000001 5263.6 4355.6 4573.6 5209.799999999999 4742.6 5063.299999999999 4805.6 True False 5460.341142775854 4660.966535288962 3837.056159666891 4744.19056598153 4893.902894434215 4320.129437694577 4747.650850769949 5105.886451990961 4543.285014835762 4743.602373891815 4214.541665208314 1.295595482624316 1.1059248918490838 0.9104326079730986 1.1256717676196082 1.1611945694674541 1.0250532040904723 1.1264928022808585 1.2114926978040896 1.0780021591294908 1.125532205091476 1.0 12.041160030115382 -9.842747189479638 1.0243614590529895 1.0116710764103498 1.1105087637627207 0.0 0.09959614265135175 0.6265935927110652 1.344710905750736 0.030479616775961744 0.018146623561727478 1.436325300474921e-10 9.842747189479638 0.09883768735237086 STS(ph)ESSASFPR ddPTM_A549_MK2206_60min_R1 2 STSESSASFPR 11 0 Q5T011-5;Q5T011 Q5T011-5 SZT2 Protein SZT2 1 S(0.003)T(0.016)S(0.98)ES(0.001)S(0.001)ASFPR;ST(0.001)S(0.995)ES(0.002)S(0.001)AS(0.002)FPR 108.98 1.5380000000000001e-07 3391000.0 1745.1 1979.7 1747.3 1251.3 2484.9 1839.1 1598.0 1578.9 2997.1 2334.2 3097.0 True False 2039.6302164013014 2080.4582740176224 1995.0934139531907 1557.8685561729912 2119.374501727125 2033.712341304222 1888.3359151529592 1802.7139101784574 2318.2616353852304 1806.902598827695 2327.9294271482977 0.8761563785461651 0.893694735654497 0.8570248696916772 0.6692078110294661 0.9104118350887245 0.873614258914846 0.81116544734183 0.7743851205948168 0.9958470425905865 0.7761844400245166 1.0 11.184831607235408 -8.775142004665161 24.95832012068222 0.998038905032223 0.8337366813424498 0.01623177515920582 0.09231168474048376 113.14277630430752 206080.47429467758 0.010920358293296848 0.011655764291120809 1.6782551761703486e-09 8.775142004665161 -0.1643022236897732 STS(ph)ESSASFPR ddPTM_A549_PD325901_60min_R1 2 STSESSASFPR 11 0 Q5T011-5;Q5T011 Q5T011-5 SZT2 Protein SZT2 1 S(0.003)T(0.018)S(0.974)ES(0.002)S(0.001)AS(0.001)FPR;S(0.068)T(0.14)S(0.789)ES(0.001)S(0.001)AS(0.001)FPR 101.35 0.00025052 9651600.0 8470.9 8340.9 7939.200000000001 8819.900000000001 9488.0 8337.7 7953.299999999999 8663.4 8775.7 9132.0 10371.099999999999 True False 9330.859532053013 9043.816915391099 8478.001854287928 9364.685191553766 8821.59561182306 8269.800535555629 8255.967183712757 8490.601690694173 8406.887847318809 8555.40396152313 9095.520447819612 1.0258741746097462 0.9943154948938729 0.9321073931860913 1.029593110727235 0.9698835445901046 0.9092168593319006 0.9076959621031787 0.9334926725088667 0.9242888183857711 0.9406173083338009 1.0 13.150940476250355 -5.546604471845083 4.727844738719211 0.9572359668439094 1.0199686948259177 0.28762550257868125 0.036435928425619137 0.20492428458951098 11.384331354219789 0.0058013474685579885 0.02706747504941734 2.840504804268481e-06 5.546604471845083 0.06273272798200824 STS(ph)FDR ddPTM_A549_PD325901_60min_R1 2 STSFDR 6 0 Q9P2F8;Q9P2F8-2;Q92900-2;Q92900 Q9P2F8;Q92900-2 SIPA1L2;UPF1 Signal-induced proliferation-associated 1-like protein 2;Regulator of nonsense transcripts 1 1 S(0.002)T(0.006)S(0.993)FDR;S(0.04)T(0.06)S(0.9)FDR 83.31299999999999 0.041167 31089000.0 5060.9 5335.0 4822.1 5268.4 5998.7 5429.2 4801.4 5305.3 5128.5 4845.4 5988.8 True False 5574.678842362335 5784.599173184127 5149.356703642918 5593.817102595473 5577.372006391545 5384.986395245524 4984.119904426891 5199.481629572662 4912.966979839159 4539.460617078864 5252.215566131086 1.0613956666802964 1.1013636246170315 0.9804161003688703 1.0650395118332927 1.0619084339106777 1.0252790136738885 0.9489557010125382 0.9899596777979794 0.9354084800937014 0.8642944220247883 1.0 12.358710414488874 -7.596093467138667 4.321117957082852 0.9692834783571034 1.0525695266701565 0.5461802582890369 0.044648025062748564 0.12050481658689163 4.379715078689568 0.005350879171760586 0.008080247027094546 2.5345830888594673e-08 7.596093467138667 0.08328604831305308 STS(ph)FER ddPTM_A549_MK2206_60min_R1 2 STSFER 6 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 S(0.012)T(0.043)S(0.944)FER;S(0.003)T(0.002)S(0.995)FER 92.18700000000001 0.03682 147272000.0 6951.1 8422.9 7435.1 7061.5 9115.7 7753.299999999999 6775.7 7553.1 9402.5 10851.0 9893.2 True False 8124.2757419214295 8851.589632885298 8489.508980760815 8791.567817002782 7774.792605494776 8573.74905977599 8006.756983918588 8623.77505539863 7272.848762707161 8399.751563653204 7436.445401570408 1.092494505534293 1.19029847661035 1.1416084597310463 1.1822271720231017 1.0454985124819065 1.1529364631609356 1.0766914233281055 1.1596636013191848 0.978000693876042 1.1295385241286608 1.0 12.860397466887342 -8.765805341944908 24.99529182945545 0.9896114292929421 1.1304505488705692 0.2494564286393277 0.05963220545322032 40.35508100518844 231033.4671035533 0.006836828757958855 0.0074018784030876915 1.7147257040494745e-09 8.765805341944908 0.14083911957762707 STS(ph)FER ddPTM_A549_PD325901_60min_R1 1 STSFER 6 0 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 STS(1)FER 105.04 0.028883999999999996 96847000.0 4041.4 4396.6 4064.2 4321.5 4724.2 4386.1 4954.4 4569.9 5253.2 5268.6 5419.1 True False 4451.679952878567 4767.116911869041 4340.021052019976 4588.429240161403 4392.388489605237 4350.381055806823 5142.942403151706 4478.749759482803 5032.426272495091 4935.939696855096 4752.585054505241 0.9366860144162114 1.0030576743387316 0.9131916635360009 0.9654596787934967 0.9242103906044662 0.9153715306331769 1.0821357943455263 0.942381821286322 1.0588818958062778 1.0385799812622067 1.0 12.214496730918322 -7.7484647222079825 24.99030905454698 1.024450202587219 0.944538645609595 0.49779571979410275 0.040694302451688695 151.28984622663305 291396.4325695279 0.0061572095175671014 0.009101123064430776 1.7845769440486784e-08 7.7484647222079825 -0.07991155697762409 STS(ph)FRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A549_MK2206_60min_R1 9 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.189)T(0.189)S(0.561)FRGGMGS(0.039)GGLAT(0.022)GIAGGLAGMGGIQNEK;S(0.147)T(0.147)S(0.578)FRGGMGS(0.042)GGLAT(0.085)GIAGGLAGMGGIQNEK;S(0.067)T(0.067)S(0.857)FRGGMGS(0.007)GGLAT(0.001)GIAGGLAGMGGIQNEK;S(0.147)T(0.147)S(0.682)FRGGMGS(0.024)GGLAT(0.001)GIAGGLAGMGGIQNEK;S(0.137)T(0.137)S(0.667)FRGGMGS(0.053)GGLAT(0.006)GIAGGLAGMGGIQNEK;S(0.128)T(0.128)S(0.615)FRGGMGS(0.128)GGLAT(0.002)GIAGGLAGMGGIQNEK;S(0.181)T(0.181)S(0.556)FRGGMGS(0.075)GGLAT(0.007)GIAGGLAGMGGIQNEK;S(0.048)T(0.048)S(0.859)FRGGMGS(0.045)GGLATGIAGGLAGMGGIQNEK;S(0.173)T(0.173)S(0.616)FRGGMGS(0.03)GGLAT(0.007)GIAGGLAGMGGIQNEK 217.49 2.8470999999999994e-91 1247782000.0 28711.100000000002 31204.000000000004 32043.100000000002 29507.100000000002 44350.19999999999 28536.100000000002 27929.7 26394.0 43967.09999999999 43423.4 42050.2 True False 33556.83176099904 32792.150316939886 36587.29340848363 36736.34082462406 37826.34433035467 31555.771161269877 33004.1649621074 30135.43032823496 34008.62205103129 33614.02378113893 31607.974813519995 1.0616571279551084 1.037464453524981 1.15753361689069 1.1622491172357696 1.1967341961489677 0.9983484024978472 1.0441720849508587 0.9534122482072098 1.0759506818033924 1.0634665453719885 1.0 14.948000981381863 -7.279299573803469 24.899906388887786 1.0281769743972402 1.1224534895876115 0.47473376834716385 0.052490904220238485 603.9488187794337 841997.532133986 0.008449413948870726 0.013523666398066386 5.256545478598111e-08 7.279299573803469 0.09427651519037128 STS(ph)FRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A549_PD325901_60min_R1 12 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.052)T(0.052)S(0.89)FRGGMGS(0.006)GGLATGIAGGLAGMGGIQNEK;S(0.058)T(0.058)S(0.871)FRGGMGS(0.012)GGLATGIAGGLAGMGGIQNEK;S(0.178)T(0.178)S(0.612)FRGGMGS(0.022)GGLAT(0.01)GIAGGLAGMGGIQNEK;S(0.133)T(0.133)S(0.522)FRGGMGS(0.159)GGLAT(0.054)GIAGGLAGMGGIQNEK;S(0.222)T(0.222)S(0.433)FRGGMGS(0.061)GGLAT(0.061)GIAGGLAGMGGIQNEK;S(0.151)T(0.151)S(0.542)FRGGMGS(0.151)GGLAT(0.004)GIAGGLAGMGGIQNEK;S(0.138)T(0.138)S(0.723)FRGGMGS(0.001)GGLATGIAGGLAGMGGIQNEK;S(0.258)T(0.258)S(0.388)FRGGMGS(0.037)GGLAT(0.06)GIAGGLAGMGGIQNEK;S(0.195)T(0.195)S(0.599)FRGGMGS(0.008)GGLAT(0.002)GIAGGLAGMGGIQNEK;S(0.036)T(0.036)S(0.902)FRGGMGS(0.025)GGLATGIAGGLAGMGGIQNEK;S(0.132)T(0.132)S(0.736)FRGGMGS(0.001)GGLATGIAGGLAGMGGIQNEK;S(0.134)T(0.134)S(0.685)FRGGMGS(0.046)GGLAT(0.001)GIAGGLAGMGGIQNEK 215.68 4.231299999999999e-91 3102334000.0 64691.09999999999 69337.90000000001 70739.3 76040.09999999999 87531.30000000002 83157.69999999998 80980.4 87259.19999999998 82975.50000000001 81831.2 85627.1 True False 71258.4928489292 75181.24817438127 75540.09428796738 80736.92427740313 81383.40345459183 82480.49126204761 84062.15343617536 85518.746802482 79488.32829007394 76664.36406660006 75095.50953490898 0.9489048451799093 1.0011417279142694 1.005920257493582 1.0751231968120767 1.0837319562597794 1.0983411894116737 1.1194031967663542 1.138799740918299 1.0584964238523864 1.0208914559792923 1.0 16.19643902143804 -5.723423476485213 1.673823789879775 1.0539055880020607 0.9540886339541739 0.426311241176344 0.04258862468640102 0.5000860047013795 2.327342283507468 0.007746562212531019 0.060396867530241025 1.8904993114203124e-06 5.723423476485213 -0.09981695404788682 STS(ph)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR ddPTM_A549_MK2206_60min_R1 6 STSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR 40 2 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.16)T(0.16)S(0.502)FRGGMGS(0.17)GGLAT(0.008)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.1)T(0.1)S(0.292)FRGGMGS(0.292)GGLAT(0.215)GIAGGLAGMGGIQNEKETMQSLNDR;S(0.172)T(0.172)S(0.655)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.158)T(0.121)S(0.721)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.156)T(0.156)S(0.633)FRGGMGS(0.055)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.232)T(0.232)S(0.536)FRGGMGS(0.001)GGLATGIAGGLAGMGGIQNEKETMQSLNDR 190.06 1.1476999999999998e-80 494378000.0 13817.54 21836.309999999998 20007.82 17017.81 25457.4 15342.62 14839.279999999999 12513.09 29388.399999999998 29982.6 28858.179999999997 True False 16149.602945581133 22947.68490857894 22845.229731334584 21187.17421395851 21712.650183213867 16966.165864793093 17535.385093248442 14286.858827230953 22731.974323631268 23209.50983617994 21691.89746074992 0.7444993216846425 1.0578920055334617 1.0531688052034889 0.976732176255919 1.0009567038799394 0.7821430050318221 0.8083841040175294 0.6586265149502065 1.0479477124932617 1.069962177268081 1.0 14.404868635302078 STS(ph)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR ddPTM_A549_PD325901_60min_R1 8 STSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR 40 2 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.143)T(0.143)S(0.713)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.184)T(0.184)S(0.632)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.192)T(0.192)S(0.609)FRGGMGS(0.008)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.163)T(0.163)S(0.67)FRGGMGS(0.004)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.152)T(0.152)S(0.696)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.136)T(0.136)S(0.729)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.171)T(0.203)S(0.624)FRGGMGS(0.001)GGLATGIAGGLAGMGGIQNEKETMQSLNDR;S(0.111)T(0.111)S(0.777)FRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDR 240.34 2.1633999999999996e-144 1872250000.0 23150.14 23924.800000000003 27104.699999999997 28056.5 27433.399999999998 36924.49999999999 32054.199999999997 36400.9 34828.5 34284.899999999994 36163.100000000006 True False 25500.325170567685 25941.026860092916 28944.18793580186 29789.48628406537 25506.572624092198 36623.79911427895 33274.040121731276 35674.855493546354 33364.7792643713 32120.14556290234 31715.267956778498 0.8040394047850857 0.8179349736362087 0.9126263090460701 0.9392790350900525 0.8042363904619221 1.154768711530036 1.0491489514475194 1.1248479925241046 1.0520100069733211 1.0127660156198461 1.0 14.952889910851004 -7.250834473421486 24.998393770953566 1.0436765431690591 0.8613438112214797 0.7501795603976531 0.05956353371747841 332.60159289936564 784024.2500965366 0.009276479145964387 0.01596246028536345 5.6126185407110734e-08 7.250834473421486 -0.18233273194757937 STS(ph)FRQGPEESGLGDGTGPK ddPTM_A549_MK2206_60min_R1 1 STSFRQGPEESGLGDGTGPK 20 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.041)T(0.041)S(0.918)FRQGPEESGLGDGTGPK 219.51 9.715899999999999e-68 89091000.0 13271.0 16261.0 16073.0 14631.0 21669.0 12441.0 10751.0 9735.8 22951.0 24159.0 25566.0 True False 15510.820355201235 17088.615443653358 18352.393087889668 18215.59565681055 18481.518804750714 13757.49836233257 12704.317536801913 11115.879464637039 17752.63514521585 18701.465120845798 19217.256614295587 0.8071297931080776 0.8892328279022539 0.9549954739240692 0.9478770056731246 0.9617147325285982 0.7158929413524332 0.6610890301246879 0.5784321710294492 0.9237861314715329 0.9731599830401341 1.0 14.230114776460121 -8.98225427953676 22.211601636643195 0.9663769054253151 0.818191059377002 0.24934201116592514 0.11874687425852641 38.52060875470651 48216.86210570664 0.023635068728633607 0.024003775403521173 1.0417073308799911e-09 8.98225427953676 -0.14818584604831309 STS(ph)FRQGPEESGLGDGTGPK ddPTM_A549_PD325901_60min_R1 2 STSFRQGPEESGLGDGTGPK 20 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 S(0.064)T(0.064)S(0.873)FRQGPEESGLGDGTGPK;S(0.046)T(0.046)S(0.908)FRQGPEESGLGDGTGPK 179.71 7.7373e-36 267740000.0 13523.400000000001 14368.7 15245.6 17245.0 16277.1 19473.8 15535.3 19928.6 21043.9 19082.9 21080.0 True False 14896.285612599106 15579.600775957031 16280.258095240328 18310.184483763373 15133.852648946573 19315.21182931782 16126.50434274235 19531.108439315747 20159.498065133525 17878.002437291918 18487.29363712987 0.8057580468501573 0.8427193877997896 0.8806187868700839 0.9904199523822788 0.8186083342427012 1.0447830931037498 0.8723020610412054 1.0564612010104864 1.0904515534196524 0.9670427044759946 1.0 14.174246423000852 -7.052756893096559 0.586202623460887 1.0433905094733156 0.8250392119201542 0.456187192888881 0.07180900464685541 0.5409625952457061 0.3294902914819208 0.014680067972489635 0.05497458687044799 8.856112135301273e-08 7.052756893096559 -0.2183512975531614 STS(ph)GSPRPAGAKPK ddPTM_A549_PD325901_60min_R1 1 STSGSPRPAGAKPK 14 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 S(0.068)T(0.068)S(0.489)GS(0.376)PRPAGAKPK 53.403 0.0065577 36654000.0 579.21 713.67 731.8 770.21 567.99 685.01 818.84 766.69 664.82 739.24 691.0 True False 638.0109728081345 773.8134755250827 781.4643486708867 817.7841224261753 528.0963418591249 679.4315056743418 850.0014042864409 751.3977664933307 636.8799273738266 692.5642602405127 606.0113806099022 1.0528036159420426 1.2768959466508716 1.289520912766366 1.3494534072992832 0.8714297433286451 1.1211530466483124 1.4026162403600113 1.2399070224343125 1.0509372393846097 1.1428238518284952 1.0 9.243201076864533 -8.846061952393457 5.067376507208201 1.0222813868418814 1.2039081074079143 0.13303074740801435 0.1446605855054577 0.21574873891143864 9.435095189045272 0.025007956304186715 0.026550141627233414 1.425404244245715e-09 8.846061952393457 0.1816267205660329 STS(ph)LKER ddPTM_A549_MK2206_60min_R1 2 STSLKER 7 1 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 S(0.246)T(0.15)S(0.603)LKER;S(0.184)T(0.184)S(0.631)LKER 70.056 0.0060096 102723000.0 12385.900000000001 12805.3 11124.4 9347.6 14504.2 11011.0 11128.599999999999 11141.5 16111.8 15959.1 17188.2 True False 14476.337113818618 13457.035074141473 12702.007196349145 11637.762419629715 12370.65139359756 12176.176711489747 13150.522569068344 12720.841744412744 12462.503025257662 12353.928225923677 12919.895569812841 1.1204685854924694 1.0415746010814244 0.983135438495897 0.900762885949418 0.957488497236883 0.9424361555939521 1.0178505312221222 0.9845932326368656 0.9645978141167123 0.9561941239516255 1.0 13.657306788472772 -5.471208737067172 2.381943144467905 0.9753783476619884 1.1259166061270651 0.701410454021046 0.030229444009756412 0.1742034919798639 1.5744624495922641 0.004489580919265492 0.04428385343395851 3.379023895029243e-06 5.471208737067172 0.15053825846507674 STS(ph)LKER ddPTM_A549_PD325901_60min_R1 2 STSLKER 7 1 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 S(0.022)T(0.128)S(0.85)LKER;S(0.038)T(0.038)S(0.924)LKER 51.872 0.013580000000000002 70707000.0 10460.9 10888.3 10900.9 11132.5 11897.0 12045.1 11224.1 12267.5 12428.099999999999 12316.400000000001 14328.9 True False 11522.88286709244 11805.895253492175 11640.700626436832 11820.129241258093 11061.395762421898 11947.008699140177 11651.239267563196 12022.815088832416 11905.790176881941 11538.740402070034 12566.53613838093 0.9169498054359668 0.9394709189141157 0.9263253213336652 0.940603608750772 0.8802263122164582 0.9507002222077265 0.9271639487016459 0.9567326235677728 0.9474201996299578 0.9182116913528952 1.0 13.617299417163995 -10.165131019728474 0.35218791557380724 1.015382094414517 0.9219455636574607 0.0 0.029969023285755722 0.81525562306665 0.1722970330205511 0.02924428454680324 0.00724177530410812 6.837053531490378e-11 10.165131019728474 -0.09343653075705638 STS(ph)LNERPK ddPTM_A549_MK2206_60min_R1 1 STSLNERPK 9 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9 P49815 TSC2 Tuberin 1 S(0.052)T(0.165)S(0.783)LNERPK 96.06700000000001 0.00025147 105450000.0 2296.0 2459.3 3921.4 4240.9 9268.9 8084.2 8557.2 8550.6 11704.0 12458.0 13053.0 True False 2683.5086681894363 2584.4678654803974 4477.513485649881 5279.920690381235 7905.457088437581 8939.664678142353 10111.932473809082 9762.673735114266 9053.062687447446 9643.72914754323 9811.579855526874 0.273504237615496 0.26340996083567153 0.45634989997331493 0.5381315515061572 0.8057272330087012 0.9111340691078033 1.0306120546033184 0.9950154693604151 0.9226916379167872 0.9828925911570608 1.0 13.26026974182243 -6.582587463721402 1.111343789072737 0.9722077891940326 0.2610390656039066 0.9794470320498309 0.04120945647403212 0.05507609231997128 0.12807698147144544 0.00722279438731624 0.0260763206906408 2.614643825033069e-07 6.582587463721402 -0.7111687235901261 down STS(ph)LNERPK ddPTM_A549_PD325901_60min_R1 4 STSLNERPK 9 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9 P49815 TSC2 Tuberin 1 S(0.006)T(0.208)S(0.786)LNERPK;S(0.014)T(0.013)S(0.973)LNERPK;S(0.004)T(0.169)S(0.828)LNERPK;S(0.004)T(0.018)S(0.978)LNERPK 115.15 5.9578000000000005e-05 471506000.0 51803.5 50396.5 55377.0 53028.2 59172.0 60274.0 55167.3 56245.7 59757.0 55731.0 60762.0 True False 57062.55318427888 54643.58992153216 59135.21622895287 56303.63147821981 55015.962852318095 59783.14852778103 57266.72179020492 55123.83538960194 57245.62110056521 52212.13514888805 53288.659202053364 1.0708198336894934 1.0254262490324881 1.1097148457935722 1.0565781222742845 1.0324140947835703 1.1218737611900247 1.0746512043597876 1.0344384004970022 1.0742552347490735 0.9797982522119109 1.0 15.701540913400192 -10.808946163001162 0.6935416330263569 0.9917544869527168 1.0675738134211898 0.4960120732901081 0.029431860864020463 0.7232587255403197 0.5048723228079527 0.03317851559498051 0.005447845465420963 1.552579462410413e-11 10.808946163001162 0.075819326468473 STS(ph)LSALVR ddPTM_A549_MK2206_60min_R1 2 STSLSALVR 9 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 ST(0.002)S(0.997)LS(0.001)ALVR;S(0.019)T(0.049)S(0.891)LS(0.041)ALVR 169.76 1.9303e-07 75772000.0 8667.0 8463.099999999999 8140.1 6581.1 10280.2 6606.1 6384.5 6129.299999999999 9139.6 8675.9 9341.0 True False 10129.77771219418 8893.835641177215 9294.488581766365 8193.469795436808 8767.996198098595 7305.153117225721 7544.481007693411 6998.147045194003 7069.49519294213 6716.0081643257645 7021.371901515101 1.4427063335027637 1.266680609705073 1.323742526693503 1.1669328886664994 1.2487582656327605 1.040416776050473 1.0745024068680127 0.9966922623317979 1.0068538302915766 0.9565093914020644 1.0 12.777537230026542 -6.509039953452556 0.5353587403954579 0.9957608661035109 1.442637626905729 0.8917313977595005 0.050559174102713725 0.29212648072237757 0.11575535311217876 0.009117638970229354 0.06429284878209998 3.097134361442878e-07 6.509039953452556 0.44687676080221816 STS(ph)LSALVR ddPTM_A549_PD325901_60min_R1 2 STSLSALVR 9 0 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5;A0A0A0MRX3 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 S(0.008)T(0.004)S(0.931)LS(0.057)ALVR;S(0.067)T(0.048)S(0.855)LS(0.03)ALVR 185.27 4.1571999999999996e-11 74715000.0 8298.9 8253.2 8361.2 8724.6 9116.599999999999 9979.2 8690.4 10366.6 11321.0 15031.7 14472.0 True False 9141.39821867272 8948.726128607925 8928.64131198008 9263.498726995762 8476.281466562614 9897.93270379322 9021.117927569347 10159.830030559624 10845.21773983799 14082.59589667403 12692.035745566569 0.7202468068895792 0.7050662563516485 0.7034837823474399 0.729867053063696 0.6678425460252464 0.77985383134858 0.7107699748419395 0.8004886083076574 0.8544900091087683 1.1095616321119484 1.0 13.631635869097515 -9.22034021572115 0.48215380433741295 0.9981321731982091 0.6979820317318524 0.875628455906712 0.04685947423902481 0.13267610724889092 0.07349268564257995 0.01472462805306374 0.009614963727058997 6.020877404085378e-10 9.22034021572115 -0.30015014146635677 STS(ph)LSSPR ddPTM_A549_PD325901_60min_R1 1 STSLSSPR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 S(0.171)T(0.171)S(0.65)LS(0.008)SPR 52.126000000000005 0.027776 7512800.0 3992.4 3879.9 3050.5 3390.9 3354.5 4357.0 3454.9 3194.1 3579.5 4286.5 4252.2 True False 4397.705508950458 4206.872789510234 3257.52527414668 3600.348191707347 3118.891492396761 4321.518036558746 3586.378110093822 3130.391169777026 3429.0660630465572 4015.8496584613326 3729.2063569166785 1.179260434540956 1.128087959441454 0.8735170334848442 0.9654462229020032 0.8363418899069645 1.1588304917864058 0.9617000956361805 0.8394255694568871 0.9195163085267616 1.076864424789207 1.0 11.864652916008891 -5.648057121350636 5.866741824808222 0.9538383976914049 1.1656229954944244 0.39817807875052513 0.09269278154499405 0.12680551372990612 5.902522722792405 0.011338606156859818 0.04546786892503891 2.2487588143995466e-06 5.648057121350636 0.2117845978030195 STS(ph)PAGQHHS(ph)PISSR ddPTM_A549_PD325901_60min_R1 1 STSPAGQHHSPISSR 15 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.277)T(0.33)S(0.393)PAGQHHS(0.935)PIS(0.049)S(0.015)R 61.861999999999995 0.0017679000000000002 7228800.0 333.97 591.67 487.75 661.09 551.77 586.93 551.59 701.56 551.02 634.0 427.01 True False 367.87438854428035 641.5321073660452 520.8516480790179 701.9240278556762 513.0155787031631 582.1502366760213 572.5810592916293 687.5668354368273 527.8625456236665 593.9691318008832 374.49047703941284 0.9823330928267204 1.7130798957500004 1.3908274843106396 1.8743441312709348 1.369902868449099 1.5545127910282044 1.5289602657409327 1.8360061939958625 1.4095486480637855 1.5860727260585898 1.0 8.548785222470249 -10.015524402164765 0.8416670508450574 1.0343617476269613 1.536190797637786 0.0 0.28716122439043196 0.373205252634869 0.5339070536660101 0.09483048983420748 0.04424633719914919 9.648850952600144e-11 10.015524402164765 0.5018290500108247 STS(ph)PASEK ddPTM_A549_MK2206_60min_R1 2 STSPASEK 8 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ST(0.005)S(0.995)PASEK;S(0.006)T(0.009)S(0.985)PASEK 109.88 0.0016381 70724000.0 12613.8 9863.2 7030.5 4174.9 4503.9 3529.8 2997.5 3219.8 3442.2 15717.0 14677.8 True False 14742.70106219858 10365.1947508666 8027.530616836208 5197.7506874183855 3841.382276280252 3903.3210931083904 3542.1069497315384 3676.21651022395 2662.547196063873 12166.518784069438 11032.89717332816 1.3362492943230548 0.9394807717345794 0.7275995135930955 0.47111385212434126 0.3481752993734708 0.3537893113464886 0.32104957511020055 0.33320500068750214 0.2413280169510267 1.1027492228860603 1.0 13.429524063385177 -2.354411114165003 11.35698360809527 0.6078109980435374 1.0984241994224133 0.0 0.36882204434291804 0.0 0.0 0.051725654387355935 0.0 0.004421696052297452 2.354411114165003 0.4906132013788759 STS(ph)PASEK ddPTM_A549_PD325901_60min_R1 2 STSPASEK 8 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 S(0.004)T(0.006)S(0.99)PASEK;S(0.004)T(0.007)S(0.988)PASEK 118.71 0.0012373 130621000.0 14660.900000000001 14144.1 11374.8 11101.0 12669.6 9653.400000000001 8571.3 9632.599999999999 11103.3 13913.7 17445.7 True False 16149.263775215866 15336.07294572327 12146.762330229038 11786.683557799786 11779.7310037472 9574.785910974575 8897.485511895333 9440.47023637148 10636.666913765841 13035.186607473099 15299.989497404002 1.0555081608360557 1.0023583969338927 0.793906579628046 0.7703720031833794 0.7699175875738937 0.6258034302964168 0.5815353999690652 0.6170246220086149 0.695207465048953 0.8519735657128928 1.0 13.901243042137418 -5.720190731741238 4.068684840635281 0.7887352584913637 1.0425888482319703 0.42382893145503675 0.11961711463713771 0.22420547061150967 7.733135052533366 0.022668940372833447 0.09391931560123572 1.9046240689563241e-06 5.720190731741238 0.25385358974060657 STS(ph)PFGIPEEASEMLEAKPK ddPTM_A549_MK2206_60min_R1 2 STSPFGIPEEASEMLEAKPK 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 S(0.283)T(0.283)S(0.331)PFGIPEEAS(0.102)EMLEAKPK;S(0.169)T(0.169)S(0.657)PFGIPEEAS(0.006)EMLEAKPK 59.211999999999996 0.0007682 15250600.0 2364.1 2302.8 2718.3 2709.6 2958.1 2397.4 2719.0 2412.6 3621.3999999999996 3706.4 3747.6000000000004 True False 2763.10228330429 2420.0026839459406 3103.795814770766 3373.452121638568 2522.9674085713755 2651.0912767346745 3213.0071046939274 2754.5934382776272 2801.158682187471 2869.121665793407 2816.9674915017645 0.9808782996751026 0.8590807992092957 1.1018216660768383 1.1975474093384493 0.8956324189692181 0.9411153251617188 1.1405907644965505 0.9778577305516278 0.9943880043479432 1.0185142975376824 1.0 11.459927199415112 STS(ph)PIIGS(ph)PPVR ddPTM_A549_MK2206_60min_R1 1 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 S(0.042)T(0.062)S(0.896)PIIGS(0.999)PPVR 68.171 0.0050015 9178100.0 849.51 963.67 809.24 870.91 1189.2 1150.8 832.36 1159.3 1736.1 1273.2 1569.4 True False 992.8865194745681 1012.7166868326327 924.0024004506837 1084.2829890966354 1014.2702553237143 1272.576892160785 983.5890377576449 1323.63432520735 1342.8761219820153 985.5832357241966 1179.6746667634932 0.8416613049753884 0.8584711661318289 0.783268833758835 0.9191373008555228 0.8597881126890894 1.0787524120121819 0.8337799102325213 1.122033355890246 1.138344460397946 0.8354703745806479 1.0 10.204173329536413 -7.381806854797379 0.9046593514700484 1.066047283282866 0.833628931036785 0.24443790616909 0.10641111119866815 0.30774081418666843 0.499939707393381 0.015216634498902808 0.03378298275786178 4.1513862754277644e-08 7.381806854797379 -0.23241835224608098 STS(ph)PIIGS(ph)PPVR ddPTM_A549_PD325901_60min_R1 1 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 S(0.148)T(0.099)S(0.753)PIIGS(1)PPVR 77.22 0.0012562 20086000.0 2029.5 2227.3 2114.6 2054.1 2337.6 2389.8 2250.8 1916.8 2065.2 2440.4 2538.1 True False 2235.5333459610665 2415.002387710029 2258.109472122791 2180.9770918004265 2173.4150402822074 2370.3382611356647 2336.4554256850197 1878.5679202994904 1978.4068259264552 2286.3127275187308 2225.929790341524 1.0043144018563448 1.084940952849863 1.0144567370996591 0.9798049791434794 0.976407723960036 1.064875573084443 1.049653693401775 0.8439475173254508 0.8888001924009061 1.027127062784825 1.0 11.120192372973793 -8.223015336911928 24.988538423138394 0.9382561212586739 1.024763397269093 0.35208596309735296 0.05541917568464668 487.92327056830374 317314.60290044284 0.009485688877188557 0.012245828223372075 5.983904628003907e-09 8.223015336911928 0.08650727601041919 STS(ph)PIIGSPPVR ddPTM_A549_MK2206_60min_R1 2 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 S(0.005)T(0.005)S(0.989)PIIGSPPVR;S(0.004)T(0.099)S(0.897)PIIGSPPVR 216.97 7.3239e-32 79439000.0 13658.0 12135.1 11201.2 9253.6 10876.1 7517.299999999999 7478.400000000001 7476.099999999999 10383.7 10400.400000000001 10969.1 True False 15963.136493959642 12752.72475679711 12789.698591182094 11520.732415409888 9276.24009748255 8312.775696420113 8837.128478022461 8535.86006959602 8031.808529361583 8050.942416608494 8245.16973824101 1.9360591717018008 1.5466903849959703 1.5511746873886183 1.3972704966856964 1.1250514412649928 1.008199462270079 1.0717946092772297 1.0352558334859732 0.9741228845914646 0.9764435023415357 1.0 13.009333478506507 -5.890410521701483 0.6070518969330619 0.9840310726814037 2.0976802230958898 0.9538570864389213 0.0658911116099678 0.25669700491979613 0.09819608356692495 0.011473574338055313 0.17148454211290248 1.2870323947963682e-06 5.890410521701483 1.113649150414486 up STS(ph)PIIGSPPVR ddPTM_A549_PD325901_60min_R1 2 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 S(0.192)T(0.192)S(0.615)PIIGSPPVR;S(0.076)T(0.076)S(0.849)PIIGSPPVR 175.57 5.9545e-16 102445000.0 13922.7 13505.9 13380.5 14240.3 15476.5 14471.7 14194.0 14653.3 14314.1 14927.1 16490.0 True False 15336.12225464997 14644.089591960172 14288.581193482927 15119.890988932197 14389.48403102652 14353.847273276851 14734.160437254826 14361.028436208528 13712.528155623604 13984.600358525171 14461.834538722556 1.060454827745847 1.0126024850270285 0.9880199607611516 1.045502971870384 0.9949971417870733 0.9925329483506009 1.018830660647036 0.9930295079615167 0.9481873215260047 0.96700043974922 1.0 13.819962954801104 -7.647801440655728 0.8671980565806037 0.9766627692457743 1.022512079739627 0.3926575543199423 0.023782893196244034 0.49895278949627275 0.7549823743774748 0.005175033761820375 0.009865244890761774 2.250083108218329e-08 7.647801440655728 0.04584931049385266 STS(ph)PINS(ph)SPPR ddPTM_A549_MK2206_60min_R1 1 STSPINSSPPR 11 0 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 2 S(0.279)T(0.33)S(0.392)PINS(0.542)S(0.457)PPR 44.299 0.048777 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STS(ph)PPPS(ph)PEVWADSR ddPTM_A549_MK2206_60min_R1 1 STSPPPSPEVWADSR 15 0 Q08495-2;Q08495;Q08495-3;E5RGQ0;E5RFK4;E5RJ61;E5RGQ7;E5RJC0 Q08495-2 DMTN Dematin 2 S(0.282)T(0.331)S(0.388)PPPS(0.998)PEVWADS(0.001)R 60.208999999999996 0.0027722 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STS(ph)PPPSPEVWADSR ddPTM_A549_MK2206_60min_R1 2 STSPPPSPEVWADSR 15 0 Q08495-2;Q08495;Q08495-3;E5RGQ0;E5RFK4;E5RJ61;E5RGQ7;E5RJC0 Q08495-2 DMTN Dematin 1 S(0.006)T(0.011)S(0.983)PPPSPEVWADSR;S(0.007)T(0.121)S(0.872)PPPSPEVWADSR 206.88 1.6021e-39 34550000.0 5125.6 5954.2 4136.6 4574.799999999999 7572.3 5315.9 6572.4 6533.7 8798.8 8151.8 8567.5 True False 5990.675971111398 6257.243347555549 4723.232081588032 5695.626205370573 6458.424700965156 5878.425009591164 7766.520005476409 7459.871983617061 6805.8858487963535 6310.302718329023 6439.953299029073 0.9302359338560094 0.97162868378237 0.7334264492725647 0.8844204205998328 1.0028682509140041 0.9128055339279295 1.2059901127927959 1.158373615029438 1.05682223655604 0.9798677762586265 1.0 12.652834510967281 -7.115172217736133 1.7755045770319728 1.048690310932242 0.8794043834904384 0.436911973992382 0.09229829953755943 0.2797610148727429 1.7305034885226538 0.014597063301273023 0.029272422976655468 7.670572555641537e-08 7.115172217736133 -0.1692859274418037 STS(ph)PPPSPEVWADSR ddPTM_A549_PD325901_60min_R1 2 STSPPPSPEVWADSR 15 0 Q08495-2;Q08495;Q08495-3;E5RGQ0;E5RFK4;E5RJ61;E5RGQ7;E5RJC0 Q08495-2 DMTN Dematin 1 S(0.009)T(0.015)S(0.976)PPPSPEVWADSR;S(0.006)T(0.011)S(0.983)PPPSPEVWADSR 186.29 2.1984999999999996e-33 88313000.0 17511.7 17185.5 15784.5 18601.1 16945.2 16049.3 15898.900000000001 14903.7 18890.9 15990.5 21147.0 True False 19289.474892567807 18633.782397517505 16855.731089909295 19750.047700836814 15755.027609766461 15918.599821928465 16503.9413397119 14606.43401177353 18096.98116787433 14980.8571010442 18546.053061877865 1.0400851775959854 1.0047303507299874 0.9088581292025368 1.064919184418479 0.8495083863504918 0.8583281719736782 0.8898896862123399 0.7875764165582824 0.9757861205020157 0.8077652453091453 1.0 14.17882456726182 -5.566549901647424 6.36558285666715 0.9515551796994887 1.0319252848208202 0.03793318897442188 0.08952381938847871 0.2931349338412027 29.440675989491382 0.011795979692235468 0.04797725410017905 2.713001902754131e-06 5.566549901647424 0.08037010512133158 STS(ph)PSAAGGQQK ddPTM_A549_MK2206_60min_R1 2 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 ST(0.001)S(0.991)PS(0.008)AAGGQQK;ST(0.02)S(0.979)PS(0.001)AAGGQQK 158.34 7.2956e-14 19818100.0 3411.3 3196.59 3623.9300000000003 2909.57 4869.2 4385.5 3541.9 4015.0 5386.6 4927.5 5328.0 True False 3987.044041722398 3359.282777260186 4137.857766627015 3622.4147806155624 4152.947130190237 4849.5706991407 4185.417382903799 4584.138545421816 4166.54370063264 3814.374327702622 4004.9105546807004 0.9955388484425898 0.8387909620937868 1.033196050231617 0.9044933041967442 1.0369637657291797 1.2109061196067938 1.045071375692057 1.1446294449857684 1.0403587405374217 0.9524243489644504 1.0 11.967554306632007 -5.822451102944692 12.087388040603297 1.03660140958234 0.9172370052989518 0.2365596361741965 0.0854465055943212 0.6880285318278145 134.6421544699534 0.011337413397724903 0.03529155396210538 1.5050429614947273e-06 5.822451102944692 -0.11936440428338813 STS(ph)PSAAGGQQK ddPTM_A549_PD325901_60min_R1 2 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 S(0.035)T(0.007)S(0.958)PSAAGGQQK;S(0.165)T(0.008)S(0.827)PSAAGGQQK 200.27 1.2759e-24 59652000.0 13898.2 14018.5 14686.099999999999 13404.6 16715.3 14618.599999999999 13212.8 14507.7 15427.2 15721.8 15890.9 True False 15309.135032685926 15199.888192930028 15682.787060693516 14232.57169794459 15541.274992654511 14499.550968381387 13715.620334321588 14218.332542429516 14778.84843353314 14729.122864900828 13936.42004071475 1.0984983939893345 1.0906594483033736 1.1253095855949244 1.021250195987538 1.1151554665582148 1.0404071437299873 0.9841566409631668 1.0202284733734468 1.0604479766222077 1.0568799463470695 1.0 13.766572391773652 -7.42190168952107 5.814912373282193 1.024963418499062 1.088015929161266 0.49410112302613385 0.03206658343317586 0.1662513298053173 7.965955637301102 0.005034826442372805 0.008070986091502272 3.785282617970935e-08 7.42190168952107 0.06305251066220419 STS(ph)PVAR ddPTM_A549_PD325901_60min_R1 1 STSPVAR 7 0 Q9Y252 Q9Y252 RNF6 E3 ubiquitin-protein ligase RNF6 1 S(0.135)T(0.337)S(0.528)PVAR 60.074 0.036744 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STS(ph)PVTDPSIPIR ddPTM_A549_MK2206_60min_R1 2 STSPVTDPSIPIR 13 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.079)T(0.079)S(0.841)PVTDPSIPIR;S(0.005)T(0.005)S(0.989)PVTDPSIPIR 177.1 4.199e-22 36190000.0 8473.7 8036.900000000001 7301.9 6771.6 11747.2 9807.2 8185.700000000001 8607.0 13126.8 13835.7 13660.099999999999 True False 9903.853397925452 8445.943881624604 8337.41921784742 8430.64230398868 10019.202441421745 10844.991394507517 9672.935732582962 9827.068607832014 10153.600759192164 10710.205760689032 10267.920170419271 0.964543279802403 0.8225564419517424 0.8119871482704543 0.8210662104947423 0.9757772046461703 1.0562013742326049 0.9420540452242322 0.9570651548443763 0.9888663517703957 1.0430745061248077 1.0 13.325856364156648 -6.810698996922768 6.696483576502071 0.9916411104639011 0.8497306555641976 0.6483402369273898 0.049436793281216466 0.08466344641179327 8.678083626592587 0.00647863957247964 0.012414342092840138 1.5463258037489492e-07 6.810698996922768 -0.14191045489970355 STS(ph)PVTDPSIPIR ddPTM_A549_PD325901_60min_R1 2 STSPVTDPSIPIR 13 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.001)T(0.111)S(0.888)PVTDPSIPIR;S(0.007)T(0.089)S(0.904)PVTDPSIPIR 171.26 1.0675e-21 51443000.0 11857.900000000001 9756.0 10218.3 9952.900000000001 9788.1 9781.4 9401.3 8922.4 11794.2 10764.0 15384.900000000001 True False 13061.705278675401 10578.172358684984 10911.775285629581 10567.66802832407 9100.61762311186 9701.74352141283 9759.071616088759 8744.43573251261 11298.53078943531 10084.359203004264 13492.654832916469 0.9680604329112659 0.7839948838592269 0.8087196641990266 0.7832163617306324 0.6744868030648895 0.719038887569006 0.7232877248353438 0.6480885964102351 0.8373838158130001 0.7473962187487831 1.0 13.719886622383372 -9.781424893229172 0.9672073189399208 0.9756405134589997 0.7635158699278621 0.0 0.1073922075043073 0.2818774338411196 0.544239348859702 0.028510454437684282 0.017151013522686834 1.6541508284355825e-10 9.781424893229172 -0.21212464353113758 STS(ph)PVTDPSIPIRK ddPTM_A549_MK2206_60min_R1 1 STSPVTDPSIPIRK 14 1 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.205)T(0.205)S(0.586)PVT(0.002)DPS(0.003)IPIRK 74.296 0.00039063 5417600.0 1404.1 1417.4 1337.5 1483.7 1842.4 1535.5 1159.6 1494.4 2519.3 2097.4 2020.1 True False 1641.0777530508662 1489.539605795109 1527.177611836772 1847.2065666058234 1571.385400612522 1697.9855908175919 1370.2843098944745 1706.2357764080596 1948.6825724954156 1623.5958832924373 1518.4534180762932 1.0807560729323682 0.9809583804567317 1.0057454470822893 1.2165052576627755 1.034859141483107 1.1182335727945776 0.9024210381313297 1.123666854772315 1.2833337850852042 1.069243128544139 1.0 10.568386935978705 -8.493672969293158 24.900970465986816 1.137465144439529 1.0500295146702294 0.09708865157434332 0.09857574864833825 1217.793155978127 1038297.8566255808 0.020106705970672416 0.024284291705832996 3.2086846059637017e-09 8.493672969293158 -0.08743562976929953 STS(ph)PVTDPSIPIRK ddPTM_A549_PD325901_60min_R1 1 STSPVTDPSIPIRK 14 1 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.033)T(0.033)S(0.933)PVT(0.001)DPSIPIRK 83.54 0.00012712 18664000.0 2392.8 2561.3 2970.1 2476.4 3581.8 2971.5 2775.8 2873.4 2823.0 3374.7 3065.3 True False 2635.7152945137414 2777.149739883133 3171.6688466622045 2629.3616036875405 3330.2267245391904 2947.301089197684 2881.434587976044 2816.087782861306 2704.359127246941 3161.6208660700963 2688.2875325376754 0.9804439676233936 1.0330553210063709 1.1798101238330818 0.9780804961757531 1.2387911204556086 1.0963489037258995 1.0718476178982397 1.0475396507169716 1.0059783763882186 1.1760724356317667 1.0 11.392471738099168 -8.506763505045248 1.9572642465971908 1.0021879271840384 1.0877310221188805 0.0 0.08958609024744357 0.361607791378553 2.721730180205255 0.012382159550149251 0.014622452687677158 3.113411282931712e-09 8.506763505045248 0.08554309493484213 STS(ph)QELAK ddPTM_A549_MK2206_60min_R1 1 STSQELAK 8 0 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 S(0.336)T(0.055)S(0.609)QELAK 136.49 0.0010855 38529000.0 7172.2 8002.0 6603.7 7078.5 9600.1 7504.1 6645.4 7097.9 10376.0 10221.0 10279.0 True False 8382.692016545414 8409.267620694556 7540.2039590927 8812.732817765942 8187.938007175576 8298.178881181566 7852.783160549105 8104.0490614070995 8025.852567067214 7912.069001207207 7726.440614032085 1.0849357984220447 1.0883753646436343 0.9758961902067611 1.1405941309845866 1.0597296240529384 1.0739976265540876 1.016351972768362 1.0488722383615083 1.0387516021920058 1.0240250843108791 1.0 12.915588236831146 -9.562224287209155 0.25128662661320283 0.9827012803735622 1.07890295717356 0.2199746540598524 0.03904322292543941 2.4180978929194037 0.38997078016550046 0.08161543829291351 0.037791192498562706 2.7401586778494247e-10 9.562224287209155 0.0962016767999978 STS(ph)RDRLDDIIVLTK ddPTM_A549_MK2206_60min_R1 1 STSRDRLDDIIVLTK 15 2 G5E9N8;Q7Z3D4-2;Q7Z3D4-3;Q7Z3D4 G5E9N8 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 1 S(0.122)T(0.122)S(0.756)RDRLDDIIVLTK 82.586 9.019799999999999e-05 17090000.0 1101.6 1219.6 1161.7 961.97 1522.9 1535.9 1181.7 1139.5 1797.7 1597.6 1783.5 True False 1287.523148465803 1281.6724306672188 1326.4465283519828 1197.6526931844744 1298.883427373432 1698.4279185520938 1396.3995938274415 1301.0276145723924 1390.523820337001 1236.7010504186119 1340.6077279040983 0.9604026007508643 0.9560383727393406 0.989436731373871 0.8933655000310051 0.9688765776429634 1.2669089422656175 1.041616846421263 0.9704759919640435 1.037233928608588 0.9224928550516908 1.0 10.388671440027558 -7.022121740792149 24.997510526832833 1.0351018838825028 0.9503403864999933 0.209969133292499 0.08354602502602204 931.805561343196 1052937.5057678637 0.011461068869435822 0.019963208260836245 9.503383588599106e-08 7.022121740792149 -0.08476149738250949 STS(ph)TGNKESSSTR ddPTM_A549_PD325901_60min_R1 1 STSTGNKESSSTR 13 1 Q69YQ0-2;Q69YQ0;F8WAN1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.014)T(0.014)S(0.908)T(0.062)GNKES(0.002)S(0.001)STR 60.306999999999995 0.0022805 11730000.0 2978.2 2914.7 2769.8 2624.6 2588.8 2320.5 1823.6 2723.3 2702.1 3562.3 3839.4 True False 3280.544671565039 3160.3319981405393 2957.7752841604574 2786.7155811009184 2406.9716188751627 2301.6026173593223 1892.99809591221 2668.9816451124793 2588.5401338058673 3337.375770054078 3367.178139961877 0.9742711954058306 0.9385698845669984 0.8784136630781124 0.8276115682826538 0.7148334655387178 0.6835404964304563 0.562191252504877 0.7926464042507407 0.7687565154587201 0.9911491555631992 1.0 11.717324333371796 -5.841666278150749 2.244267394827339 0.8276795247972155 0.9672997178565982 0.1787903690562842 0.1226201024598668 0.5862060911767193 5.687151912698399 0.021062061288604345 0.10165052493971444 1.439904609006705e-06 5.841666278150749 0.13962019305938267 STS(ph)TPNVHMVSTTLPVDSR ddPTM_A549_MK2206_60min_R1 2 STSTPNVHMVSTTLPVDSR 19 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.298)T(0.298)S(0.315)T(0.088)PNVHMVSTTLPVDSR;S(0.131)T(0.131)S(0.576)T(0.161)PNVHMVSTTLPVDSR 96.133 6.6382e-07 35767000.0 5227.1 5754.7 6380.299999999999 5708.6 7303.4 5928.9 4958.799999999999 4767.3 8346.6 8389.3 8106.1 True False 6109.306689674655 6047.589649688949 7285.122479852074 7107.207256268792 6229.0795347554795 6556.292262714702 5859.749772253125 5443.079374243942 6456.108426781341 6494.151303378103 6093.131653021252 1.0026546343611964 0.9925256820423828 1.1956286019586955 1.1664292946542054 1.0223116599929067 1.0760135569143323 0.9616975483120564 0.8933139285682454 1.05957146413866 1.0658150312832988 1.0 12.572968197364087 -7.310297552432585 2.216339750989209 1.013132917154595 1.0863225063195774 0.1897939405216359 0.07469965231450332 0.46145014168567017 4.428561811696659 0.012027751839730266 0.021323045208306416 4.894433673371183e-08 7.310297552432585 0.0731895891649823 STS(ph)TPNVHMVSTTLPVDSR ddPTM_A549_PD325901_60min_R1 4 STSTPNVHMVSTTLPVDSR 19 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.079)T(0.079)S(0.421)T(0.421)PNVHMVSTTLPVDSR;S(0.23)T(0.23)S(0.431)T(0.108)PNVHMVSTTLPVDSR;S(0.104)T(0.104)S(0.687)T(0.104)PNVHMVSTTLPVDSR;S(0.149)T(0.149)S(0.553)T(0.149)PNVHMVSTTLPVDSR 130.6 5.1079e-17 81997000.0 8045.0 9173.7 7710.5 9891.900000000001 11391.5 9310.1 9824.5 10326.2 9737.7 10393.9 11587.4 True False 8861.722477584015 9946.799894102955 8233.780897003106 10502.900196865116 10591.400338541562 9234.281632353815 10198.376723672685 10120.235840252813 9328.458332763917 9737.627380165928 10162.223258580581 0.8720259585028822 0.9788015516884327 0.8102342063830201 1.033523858865911 1.042232597045002 0.9086871442778776 1.0035576334205782 0.9958682842071674 0.9179544766335787 0.958218209971313 1.0 13.310928444380167 -6.2730176675642255 24.990902688214494 0.971877405606589 0.8961986644441062 0.36211199962680973 0.054776350740603504 714.9157065882582 1543094.6645958205 0.00784451419078225 0.018368647938742773 5.333131992947112e-07 6.2730176675642255 -0.07567874116248274 STS(ph)TPTS(ph)PGPR ddPTM_A549_MK2206_60min_R1 2 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 2 S(0.009)T(0.013)S(0.976)T(0.006)PT(0.079)S(0.917)PGPR;S(0.005)T(0.007)S(0.987)T(0.001)PT(0.147)S(0.852)PGPR 126.66 1.083e-06 150764000.0 2128.5 2614.1 1967.4699999999998 2260.5 2208.7 1688.62 1472.42 1800.23 2700.5 2519.8 2411.0 True False 2487.7387631712627 2747.1465242761365 2246.4868306246667 2814.3226014777 1883.8031558471985 1867.3086475847615 1739.9396546868084 2055.4181154731546 2088.8410618123567 1950.5754299228952 1812.282159785131 1.372710507433465 1.5158492343167167 1.2395899934759698 1.5529163526122078 1.0394646030563734 1.030363090814818 0.9600820960976079 1.1341600999464954 1.1526025627598824 1.0763089066407632 1.0 10.823591875163272 -6.773147176464414 24.99921461856065 1.064685765182347 1.4141883911729562 0.7865359593613604 0.09116266861874227 76.86847664623873 164134.47305173328 0.013536453045164227 0.025732031912696813 1.6859815724528205e-07 6.773147176464414 0.34950262599060933 STS(ph)TPTS(ph)PGPR ddPTM_A549_PD325901_60min_R1 2 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 2 S(0.006)T(0.009)S(0.974)T(0.011)PT(0.009)S(0.99)PGPR;S(0.086)T(0.026)S(0.884)T(0.005)PT(0.051)S(0.949)PGPR 122.18 1.0307e-05 206376000.0 4857.700000000001 5533.4 4823.64 5553.2 6352.299999999999 5632.299999999999 5523.5 5692.700000000001 5573.5 5691.0 6232.900000000001 True False 5350.850127950267 5999.719037468988 5151.001217303689 5896.208551767748 5906.136362245325 5586.432416183112 5733.699815075177 5579.1546326632415 5339.265177368344 5331.6692887678655 5466.292813608483 0.978880991268741 1.0975846413738624 0.9423207634395533 1.078648501428423 1.08046468852562 1.0219782596123534 1.0489192603808155 1.0206468666979907 0.9767616480544363 0.9753720612065514 1.0 12.416347027623498 -8.59007765607306 4.713287733687719 0.9891336005426418 1.0371116310022086 0.21039621668760689 0.04315246482754262 0.2282198126712497 9.963497761483099 0.006741000908642136 0.0076844833658768425 2.569936212117478e-09 8.59007765607306 0.047978030459566834 STS(ph)TPTSPGPR ddPTM_A549_MK2206_60min_R1 2 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 S(0.037)T(0.006)S(0.92)T(0.037)PTSPGPR;S(0.084)T(0.02)S(0.891)T(0.006)PTSPGPR 174.87 2.6344999999999997e-15 75320000.0 10316.8 12244.7 12512.1 10455.3 15890.7 12287.400000000001 10353.9 11330.1 16854.1 18191.699999999997 17355.4 True False 12058.023618456793 12867.902928657668 14286.503923037662 13016.848969356244 13553.199080282995 13587.644512284005 12235.069606947573 12936.176371976022 13036.673260467178 14082.18233531563 13045.575195327605 0.9242998823674319 0.9863806490699182 1.0951225767457542 0.997798010011728 1.0389115755614364 1.0415519675322977 0.9378712263549466 0.991614105034574 0.9993176280288802 1.079460439610152 1.0 13.671272935291803 STS(ph)TPTSPGPR ddPTM_A549_PD325901_60min_R1 1 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 S(0.031)T(0.006)S(0.892)T(0.071)PTSPGPR 182.54 1.5024e-18 38523000.0 8657.0 9001.0 9457.4 9495.0 11635.0 10364.0 9653.3 10078.0 12118.0 10985.0 13201.0 True False 9535.852267053431 9759.54585901225 10099.236035966172 10081.484585290415 10817.797738570962 10279.599020173244 10020.661613988445 9876.986383961948 11608.722601480138 10291.405225288177 11577.360688033737 0.8236637454778106 0.8429853851836572 0.8723262847295289 0.8707929947894387 0.9343923913290657 0.8879052227161024 0.8655393819029683 0.8531293660195556 1.0027089000931635 0.8889249892616101 1.0 13.499018776548551 -8.765808337706089 24.99976471345339 1.0012792132891042 0.8708715283443818 0.43254086072425035 0.04296272548680429 30.858969679690336 176578.57667382437 0.004828986170675473 0.005228053631773797 1.7147138759208745e-09 8.765808337706089 -0.13040768494472244 STS(ph)VPENPK ddPTM_A549_MK2206_60min_R1 2 STSVPENPK 9 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 STS(1)VPENPK;ST(0.002)S(0.998)VPENPK 164.66 3.4776999999999998e-06 14390900.0 5594.5 6556.4 5173.2 5340.7 7003.0 5326.6 4551.0 5380.7 7597.4 7481.099999999999 7564.299999999999 True False 6538.714827607055 6890.092755351386 5906.837548825411 6649.171739753131 5972.867976818007 5890.257276489078 5377.857790901823 6143.4307027026525 5876.601030554785 5791.1143141504 5685.875545940549 1.1499926044416138 1.2117909897395822 1.038861561618706 1.1694191485602126 1.0504746241029417 1.0359455160242557 0.9458275594409314 1.0804722426766404 1.033543731844501 1.018508806138922 1.0 12.473166805904157 -6.911321659491775 3.687979493418631 1.0175929745836447 1.140100434141799 0.5785451618269896 0.04920615585543559 0.12249844738120619 3.2637825284732123 0.006840482706156349 0.013397439960670094 1.2265304668950847e-07 6.911321659491775 0.12250745955815434 STS(ph)VPENPK ddPTM_A549_PD325901_60min_R1 2 STSVPENPK 9 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4;P04150-12;P04150-13;P04150-11 P04150-3 NR3C1 Glucocorticoid receptor 1 S(0.008)T(0.008)S(0.984)VPENPK;ST(0.006)S(0.994)VPENPK 154.84 1.4939e-05 34897000.0 13386.5 16949.5 15322.4 16376.3 19105.0 16950.800000000003 16070.099999999999 13483.7 14769.4 14639.9 15439.2 True False 14745.487625379561 18377.893849275417 16362.270205076253 17387.826857724223 17763.130708671964 16812.75830481982 16681.65644939614 13214.757025741983 14148.693479972015 13715.53421553903 13540.276277152541 1.0890093616672103 1.3572761347776727 1.2084147967265233 1.2841559877964916 1.3118735796140986 1.2416850262641368 1.2320026643432875 0.9759591868919374 1.0449338839449014 1.01294345364889 1.0 13.724969555656708 -8.217120776917213 6.3169065822016135 1.0184252376613374 1.2538309818678481 0.7505990276075631 0.06580232827884919 0.07313461675156567 7.773311211212793 0.009635232880386025 0.01240089045194782 6.065676202036758e-09 8.217120776917213 0.23540574420651073 STS(ph)YGYSR ddPTM_A549_MK2206_60min_R1 5 STSYGYSR 8 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 S(0.011)T(0.076)S(0.913)YGYSR;ST(0.001)S(0.999)YGYSR;S(0.005)T(0.012)S(0.983)YGYSR;S(0.028)T(0.076)S(0.894)YGYS(0.002)R;S(0.146)T(0.146)S(0.704)Y(0.001)GY(0.002)S(0.002)R 162.31 0.00018398 1331987300.0 25785.699999999997 28861.899999999998 22223.1 20945.3 45859.0 27963.9 23153.499999999996 27459.199999999997 47141.8 36346.899999999994 35787.1 True False 30137.695760162176 30330.847430857815 25374.6697462503 26076.899440270234 39113.20184904998 30923.021337065496 27360.191246241568 31351.625690273133 36464.25756998545 28136.11004598163 26900.175396286384 1.1203531321332105 1.127533444820774 0.9432901225526328 0.9693951454260851 1.4540128929586693 1.1495472011433232 1.0171008494620704 1.1654803445854587 1.3555397700127785 1.0459452264339462 1.0 14.715327959116761 STS(ph)YGYSR ddPTM_A549_PD325901_60min_R1 6 STSYGYSR 8 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 S(0.029)T(0.003)S(0.968)YGYSR;S(0.002)T(0.006)S(0.991)YGYSR;S(0.003)T(0.007)S(0.99)YGYSR;S(0.021)T(0.051)S(0.927)YGYSR;S(0.125)T(0.388)S(0.487)YGYSR;S(0.008)T(0.033)S(0.959)YGYSR 115.82 0.0012975999999999999 1487398600.0 37385.799999999996 39236.8 36837.4 37458.600000000006 42915.299999999996 38791.4 35360.4 40469.100000000006 40377.299999999996 47111.6 45404.700000000004 True False 41181.17889402869 42543.42283756156 39337.407485281394 39772.33264734697 39901.0773777477 38475.49569964768 36706.05937195336 39661.91205310524 38680.38249684308 44136.965535884054 39820.2097441077 1.0341778498573173 1.068387713448868 0.9878754466154527 0.998797668393301 1.0020308188771399 0.9662303625947376 0.9217947270452248 0.9960246896734168 0.9713756593802653 1.1084061540488273 1.0 15.281213199703473 -5.788334842887684 10.951068123663251 0.9831186358357945 1.0512682161156466 0.15731009571952892 0.04425486838267062 0.24773507927642735 100.06678753424089 0.0033278470652233897 0.01049262533936804 1.6280403226286878e-06 5.788334842887684 0.06814958027985207 STSAPQMS(ph)PGSSDNQSSS(ph)PQPAQQK ddPTM_A549_MK2206_60min_R1 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 S(0.001)T(0.001)S(0.001)APQMS(0.824)PGS(0.081)S(0.092)DNQS(0.012)S(0.247)S(0.741)PQPAQQK 94.73 3.3468999999999997e-09 20015000.0 330.73 405.96 511.52 378.27 488.3 530.73 395.3 490.14 720.27 910.1 643.76 True False 386.5491384278276 426.62163000464415 584.0612276685947 470.9461669811856 416.47171684709843 586.8914963299387 467.1208931539203 559.6188459907963 557.1299950348404 704.507777908099 483.8966251278623 0.7988258614651174 0.8816379529241724 1.206995869240182 0.9732371389379814 0.8606625779567116 1.2128447810002014 0.9653319922007944 1.1564842921624543 1.1513409395811083 1.455905541234026 1.0 8.918555067141378 -7.250886651811769 24.99255694096636 1.0802070095883578 0.9569971821176791 0.23000746788340998 0.1629251062446647 942.9768746509553 2233298.185853835 0.01786984353420637 0.030755335718945325 5.611944252132858e-08 7.250886651811769 -0.12320982747067866 STSAPQMS(ph)PGSSDNQSSS(ph)PQPAQQK ddPTM_A549_PD325901_60min_R1 2 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 STSAPQMS(0.578)PGS(0.351)S(0.071)DNQS(0.021)S(0.086)S(0.893)PQPAQQK;STSAPQMS(0.584)PGS(0.329)S(0.085)DNQS(0.006)S(0.045)S(0.952)PQPAQQK 114.63 2.3276e-17 53836000.0 2188.34 1779.77 1725.23 1422.51 2473.0 2241.75 1550.1799999999998 2078.56 2016.76 2494.3 2833.62 True False 2410.4986658292373 1929.7574640033579 1842.3144824507722 1510.375211945389 2299.3050113868485 2223.493931249843 1609.1729481910456 2037.1014902012248 1932.0025906718188 2336.8094723200984 2485.10270379715 0.9699794950712016 0.7765302661555018 0.7413433978546562 0.6077717470741103 0.9252354069204428 0.8947291908106745 0.6475277443190922 0.8197252721541871 0.7774337003133861 0.9403271215912065 1.0 11.279089761076213 -10.666822357893341 0.7699155312591571 1.010938526737637 0.7896594206641292 0.2830113058438968 0.10530120255614739 0.6563184703511112 0.6389193656366281 0.08928127696423181 0.019626293096828566 2.1536624802136208e-11 10.666822357893341 -0.22127910607350776 STSAPQMS(ph)PGSSDNQSSSPQPAQQK ddPTM_A549_MK2206_60min_R1 5 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMS(0.309)PGS(0.309)S(0.309)DNQS(0.055)S(0.015)S(0.004)PQPAQQK;S(0.001)T(0.001)S(0.002)APQMS(0.665)PGS(0.164)S(0.164)DNQS(0.003)S(0.001)SPQPAQQK;STSAPQMS(0.947)PGS(0.038)S(0.014)DNQS(0.001)SSPQPAQQK;STSAPQMS(0.999)PGSSDNQSSSPQPAQQK;S(0.005)T(0.005)S(0.005)APQMS(0.411)PGS(0.229)S(0.229)DNQS(0.047)S(0.056)S(0.012)PQPAQQK 220.66 2.5679999999999996e-82 211808000.0 6758.860000000001 8214.0 8588.16 6582.15 9381.449999999999 7171.53 6801.05 6962.75 9763.33 12386.029999999999 10121.54 True False 7899.59032973818 8632.057515169348 9806.090227194085 8194.777045483941 8001.451132531672 7930.416544523664 8036.712750782877 7949.741135027582 7551.9513438342665 9588.017220528569 7608.082277707003 1.0383155756458293 1.1345904526378177 1.2889043347924385 1.0771146717874036 1.051704074754463 1.042367347650952 1.0563388324981493 1.044907355736898 0.9926221967870654 1.2602410003665598 1.0 12.89331713298964 -7.161481917431295 0.9074145062458204 1.0009953862999745 1.1487483981156041 0.0 0.09898964284539741 0.3609139639437153 0.5804375280862939 0.010514789368566488 0.027103334495402455 6.894742999755705e-08 7.161481917431295 0.1477530118156296 STSAPQMS(ph)PGSSDNQSSSPQPAQQK ddPTM_A549_PD325901_60min_R1 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 S(0.003)T(0.003)S(0.003)APQMS(0.329)PGS(0.329)S(0.269)DNQS(0.052)S(0.011)S(0.002)PQPAQQK 58.457 0.00049898 44293000.0 4284.9 4387.2 4517.1 4223.8 4361.3 4607.7 4997.1 5748.4 4250.6 5494.8 5142.6 True False 4719.899893623342 4756.924740879736 4823.657569528924 4484.694533054206 4054.9773336682024 4570.176418878067 5187.267375018042 5633.743652467441 4071.9620638596703 5147.8573902515645 4510.092801627326 1.0465194622869654 1.0547287938650285 1.069525125467143 0.9943685707389534 0.8990895558080514 1.0133220356860644 1.1501464832711157 1.249141403572601 0.9028554938803988 1.1414083072512657 1.0 12.138941403967596 STSAPQMSPGS(ph)SDNQSSS(ph)PQPAQQK ddPTM_A549_MK2206_60min_R1 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 STSAPQMS(0.196)PGS(0.566)S(0.216)DNQS(0.117)S(0.227)S(0.679)PQPAQQK 91.59899999999999 5.2505000000000004e-09 24152000.0 454.59 428.32 395.39 239.14 469.05 334.71 386.67 407.73 502.49 556.63 900.95 True False 531.3136783415665 450.11965849736237 451.46224743487176 297.7293107354025 400.0533663467777 370.12879003748355 456.9229338624499 465.52697612075644 388.6768173116428 430.88689640367573 677.2192500449659 0.7845519428254416 0.6646586884047898 0.6666411910247614 0.43963503801115217 0.5907294665947771 0.5465420393955249 0.6747045861914162 0.6874095443829255 0.5739305509786314 0.6362590791314124 1.0 9.403479172384674 -10.781286988362258 0.7535286762074911 1.0335975498677796 0.6172235065018765 0.005678939273428885 0.13657357382312932 0.349016949912762 0.30440143624383087 0.09138076910723013 0.016858463366557146 1.6546761670728872e-11 10.781286988362258 -0.4163740433659031 STSAPQMSPGS(ph)SDNQSSSPQPAQQK ddPTM_A549_MK2206_60min_R1 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMS(0.006)PGS(0.199)S(0.199)DNQS(0.199)S(0.199)S(0.199)PQPAQQK 68.369 3.7966e-05 2736200.0 193.86 311.08 355.78 176.48 179.95 185.4 308.42 0.0 243.55 329.33 299.45 True False 226.57882857805063 326.91264326989017 406.23495382376586 219.71760792248827 153.4795933783235 205.0189049414402 364.455921746856 0.0 188.3863138694314 254.93412427038152 225.08830060043857 1.0066219700163712 1.4523751007841283 1.804780402802394 0.976139618702422 0.6818639305948203 0.9108376774560833 1.619168658587073 0.0 0.8369440498102207 1.1325960682555565 1.0 7.81434726165177 -6.433232722798851 7.9987488098212705 0.8868685566394882 1.4224742374089772 0.25796374085355633 0.40013805547573983 0.3013088347439279 24.281770192350713 0.05238269844570472 0.12197668267970675 3.6877992970731624e-07 6.433232722798851 0.535605680769489 STSAPQMSPGSSDNQSS(ph)SPQPAQQK ddPTM_A549_PD325901_60min_R1 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMSPGSSDNQS(0.008)S(0.56)S(0.432)PQPAQQK 113.47 4.038e-14 93549000.0 3051.4 2776.4 2372.1 2734.7 4209.8 3103.8 3236.2 3193.3 3523.4 3203.8 2926.7 True False 3361.1758816780457 3010.3769717766477 2533.0849705960813 2903.6162080456784 3914.118171021574 3078.5236818616104 3359.3553619165914 3129.6071264046136 3375.3237509535516 3001.511521236073 2566.7344538798848 1.3095144597436952 1.1728431693532424 0.9868901579464371 1.131249165123631 1.524940830986618 1.1993931344195359 1.3088051850625133 1.219295249523724 1.3150264710287425 1.1693891889357615 1.0 11.325718331690654 -10.871051592160828 1.0790947113172606 0.9978193379326952 1.2421556228264798 0.12408117135531793 0.13624777518005096 0.5141401589939516 1.0472672848941713 0.09601015247546756 0.02238058334848303 1.3457004816132438e-11 10.871051592160828 0.24433628489378467 STSAPQMSPGSSDNQSSS(ph)PQPAQQK ddPTM_A549_MK2206_60min_R1 2 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMS(0.004)PGS(0.058)S(0.155)DNQS(0.155)S(0.29)S(0.338)PQPAQQK;STSAPQMS(0.009)PGS(0.139)S(0.139)DNQS(0.139)S(0.216)S(0.358)PQPAQQK 64.16 6.8554e-05 58271000.0 1309.62 1278.76 1159.79 1122.0 1858.6399999999999 1706.77 1390.76 1201.7 2132.7799999999997 1951.8 2233.76 True False 1530.6518388650911 1343.8434219744286 1324.2656616315294 1396.8900503684945 1585.2365181255195 1887.3792685377666 1643.4430897109696 1372.044655051904 1649.7087353498073 1510.8870244160287 1679.055743360279 0.9116146649198267 0.8003566452683739 0.7886966629120297 0.8319497764695478 0.9441238174457509 1.1240718338276081 0.9787900706750581 0.8171525337842827 0.9825217190516023 0.8998432782179728 1.0 10.713434412098715 -6.828333220568647 4.279161496495622 0.9857683356298327 0.826906509006314 0.3890258952468626 0.07680383794561334 0.1347427073108011 4.848005980099242 0.01057407803181391 0.0208818207923232 1.4847959676318604e-07 6.828333220568647 -0.15886182662351866 STSAPQMSPGSSDNQSSS(ph)PQPAQQK ddPTM_A549_PD325901_60min_R1 1 STSAPQMSPGSSDNQSSSPQPAQQK 25 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 STSAPQMSPGSSDNQS(0.005)S(0.19)S(0.805)PQPAQQK 125.62 2.7681999999999996e-18 120190000.0 750.86 630.99 634.21 856.59 1188.6 884.22 723.64 1022.4 931.07 974.36 993.21 True False 827.0867544460828 684.1657417595978 677.2513044145444 909.4996188429611 1105.1168364473956 877.0192054822065 751.1785161910022 1002.0074299427158 891.9403657831418 912.8387433146817 871.051466476933 0.9495268491898986 0.7854481257310595 0.7775100903667203 1.044139931847582 1.268715889908511 1.0068511898951398 0.8623813231487106 1.150342394801824 1.0239812457818322 1.0479733729245209 1.0 9.766614153417969 -6.268898947183675 24.603831997587214 1.0306651001429248 0.8322903303278758 0.44332841809309287 0.10456968594758492 322.4169472415159 1063427.2323186279 0.01449121184492687 0.0343075594890885 5.383950431596025e-07 6.268898947183675 -0.19837476981504898 STSFRGGMGS(ph)GGLATGIAGGLAGMGGIQNEK ddPTM_A549_MK2206_60min_R1 2 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.084)T(0.084)S(0.284)FRGGMGS(0.369)GGLAT(0.179)GIAGGLAGMGGIQNEK;S(0.244)T(0.244)S(0.244)FRGGMGS(0.266)GGLAT(0.003)GIAGGLAGMGGIQNEK 70.986 7.8578e-05 109755300.0 3500.3 4045.9 4119.9 3994.3 4395.5 3736.0 3187.7 3648.2 4959.8 5499.5 5903.1 True False 4091.0650658813097 4251.81902856387 4704.1637704720115 4972.90367931094 3748.927772683641 4131.341040243908 3766.863827742859 4165.343522143927 3836.413219173088 4257.15913043137 4437.1973527281625 0.9219930376470551 0.9582217536368279 1.0601655496751137 1.1207307865748644 0.8448864169583652 0.9310699326239789 0.8489286205462202 0.9387329863935194 0.8646027918533555 0.9594252389549232 1.0 12.115433005832486 -6.7726531837699095 24.999963136831234 0.9225468467374478 1.0144086378671109 0.35476862680086163 0.06578040883135093 230.13806698193972 513068.4255502328 0.010852963068609509 0.020645725786501253 1.6879004005021204e-07 6.7726531837699095 0.09186179112966308 STSFRGGMGS(ph)GGLATGIAGGLAGMGGIQNEK ddPTM_A549_PD325901_60min_R1 1 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.236)T(0.236)S(0.236)FRGGMGS(0.249)GGLAT(0.043)GIAGGLAGMGGIQNEK 51.166000000000004 0.0017794 4325400.0 1497.5 1361.4 1206.1 1748.8 1630.8 1608.2 1944.3 1855.7 1620.0 1312.6 1897.7 True False 1649.5250975987651 1476.1299558337153 1287.9531988684846 1856.819404187033 1516.258233954579 1595.10335239701 2018.2914004617828 1818.686607731513 1551.9170337017529 1229.7222119902824 1664.2949305114494 0.9911254714282249 0.8869401262792348 0.7738731731116237 1.1156793006732404 0.9110514045059444 0.9584258914415029 1.2127005637405552 1.092767017665924 0.9324771741177136 0.7388847910582653 1.0 10.700695401484229 -6.258878487253172 24.983160984088315 0.9969894017003559 0.8842756531781487 0.13490333053897807 0.12543235052777651 287.2663392837002 2802446.5587246693 0.014246400024925472 0.03590341452746177 5.50961830347086e-07 6.258878487253172 -0.11271374852220717 STSFRGGMGSGGLAT(ph)GIAGGLAGMGGIQNEK ddPTM_A549_PD325901_60min_R1 2 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.167)T(0.167)S(0.167)FRGGMGS(0.065)GGLAT(0.434)GIAGGLAGMGGIQNEK;S(0.046)T(0.046)S(0.245)FRGGMGS(0.269)GGLAT(0.395)GIAGGLAGMGGIQNEK 94.406 7.5173e-10 433948000.0 13534.0 13641.400000000001 15065.8 15646.800000000001 16713.5 15934.1 16312.8 17299.8 15748.7 16535.5 17614.1 True False 14907.961716795795 14791.00865249746 16088.255786015108 16613.26729953893 15539.601418444856 15804.337972534024 16933.59253070667 16954.741917569438 15086.836906579489 15491.445708033916 15447.677364979556 0.9650616959797907 0.957490780201638 1.0414676204001883 1.0754540573977682 1.0059506715018334 1.0230882998866244 1.0961901993820595 1.0975592975554016 0.9766411189284607 1.0028333284040218 1.0 13.915102317619427 -4.4258009800947145 16.275725236823906 1.009757778439581 1.0191159194401567 0.0 0.049233060250948896 12409932.468893815 0.0 0.007165692903469744 0.0 3.7514487685229894e-05 4.4258009800947145 0.009358141000575637 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_A549_MK2206_60min_R1 1 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 56.854 0.0015244000000000002 1933100.0 480.68 565.08 625.59 671.72 792.57 524.55 647.44 595.15 1011.9 1251.4 1350.0 False True 561.8070325023074 593.8401583481728 714.30806892633 836.2914301546562 675.9840029111306 580.0575328318905 765.0714674008963 679.514335070434 782.7062656722545 968.7078708649543 1014.7577418954485 0.5536366063617487 0.5852038706686278 0.7039198021707982 0.8241291449450406 0.6661530875817431 0.5716216875058386 0.7539449425355775 0.6696320777027834 0.7713232758493185 0.9546198376920205 1.0 9.986919631498939 -10.538624697952143 0.28320804499868285 1.1471160233875874 0.6228161647148759 0.7156574263255446 0.07541065299186168 1.4705960759117382 0.16762496542917188 0.2577794528063764 0.047264719231547646 2.8931789861225185e-11 10.538624697952143 -0.5242998586727116 STSGS(ph)PRPAGAK ddPTM_A549_MK2206_60min_R1 1 STSGSPRPAGAK 12 1 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 S(0.031)T(0.031)S(0.027)GS(0.911)PRPAGAK 52.265 0.007026899999999999 3659400.0 1066.6 919.29 866.95 596.71 1133.8 1090.0 855.15 689.21 1136.2 1359.7 1672.7 True False 1246.6160041336466 966.0779343949383 989.8965462294506 742.9039767873303 967.0195219357781 1205.343076516558 1010.5196857591073 786.9076281171028 878.8525141385668 1052.5428256473378 1257.3224258285302 0.9914847445055086 0.7683613324230082 0.7873052495481773 0.590861947203227 0.7691102155428009 0.9586586954593452 0.8037076767267642 0.6258598526138266 0.6989873846872926 0.8371304003058325 1.0 10.296138944361672 -10.856151206741185 1.1217323272285487 0.9990807666300052 0.7684126819417283 0.11655991157893075 0.1233744472566607 0.45036150269209474 1.0125658336167704 0.07992160042872262 0.019793775560810425 1.3926718370023278e-11 10.856151206741185 -0.23066808468827693 STSGS(ph)PRPAGAKPK ddPTM_A549_MK2206_60min_R1 2 STSGSPRPAGAKPK 14 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 S(0.014)T(0.046)S(0.039)GS(0.901)PRPAGAKPK;S(0.111)T(0.152)S(0.135)GS(0.602)PRPAGAKPK 60.489 0.0014352 114530000.0 3978.3 4136.200000000001 4138.200000000001 4017.7 5393.5 3917.8999999999996 4856.799999999999 3575.1 6182.1 7744.7 6661.200000000001 True False 4649.739779903326 4346.714912861387 4725.058985647051 5002.036680361404 4600.123294726248 4332.489577508462 5739.217692562513 4081.881373284566 4781.8642207851 5995.166891072253 5007.040200232566 0.9286403931183448 0.8681206339544651 0.9436830535987272 0.9990007030758551 0.9187310488365126 0.8652795672196176 1.1462296013313291 0.815228400422064 0.9550281263096295 1.1973474650340914 1.0 12.289742323156123 -11.805690086557231 0.009819852393051791 1.9840687540704582 1.7418903795972973e-07 0.15559498534102212 0.10177822483461084 8628.702116484157 13.043021869168204 1415.3439335848168 1225.2482405794437 1.5642635061337317e-12 11.805690086557231 -1.9840685798814204 STSGS(ph)PRPAGAKPK ddPTM_A549_PD325901_60min_R1 2 STSGSPRPAGAKPK 14 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 S(0.029)T(0.029)S(0.027)GS(0.915)PRPAGAKPK;S(0.052)T(0.052)S(0.06)GS(0.835)PRPAGAKPK 66.965 0.00081553 184910000.0 5592.5 5804.200000000001 5342.1 5888.299999999999 6642.099999999999 6714.4 6002.6 6490.5 7837.4 7497.6 8428.6 True False 6160.246483019099 6293.34030384167 5704.64703065694 6252.006917700429 6175.581810001044 6659.720152552225 6231.032227748752 6361.04188580125 7508.021333292657 7024.200256451582 7391.935633297567 0.8333739345983716 0.8513792078346589 0.7717392728583702 0.8457875214088394 0.835448536941074 0.90094401289873 0.8429500115883812 0.8605380513795908 1.0157043710543383 0.9502518156151832 1.0 12.851736478925973 -8.726135173711233 5.2898294659071725 1.0076351131814452 0.8414851171635122 0.7887091535487875 0.03330237701597857 0.04373806229503094 3.0218003807471976 0.004984290968481347 0.005570141225869713 1.8787319723959622e-09 8.726135173711233 -0.166149996017933 STSLSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 STSLSSPR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 STS(0.005)LS(0.14)S(0.855)PR;S(0.071)T(0.071)S(0.071)LS(0.093)S(0.694)PR 90.15 0.0026425 52275000.0 6936.1 7676.8 6421.7 6639.9 8478.4 7263.299999999999 6108.1 6684.200000000001 8715.300000000001 9665.1 11899.2 True False 8106.744108636214 8067.516329736068 7332.393622379213 8266.675798076434 7231.238591268562 8031.897585011669 7217.862705472964 7631.705819503984 6741.298465474259 7481.747197296527 8944.3002387869 0.9063586744865038 0.9019728893660496 0.8197839324067339 0.924239524320533 0.8084744919351369 0.8979906052551095 0.8069790271767432 0.8532479473809634 0.7536976941181671 0.8364821168292158 1.0 13.126752901481261 -11.047504150498062 1.3666409810369875 0.9995145321604777 0.8420629256014454 0.0 0.06921287296320527 0.27402809646308335 0.917193523229026 0.039196213320171536 0.008864753656223615 8.963876192446163e-12 11.047504150498062 -0.15745160655903234 STSLSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 STSLSSPR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 S(0.001)T(0.001)S(0.006)LS(0.029)S(0.963)PR;STS(0.002)LS(0.014)S(0.984)PR 104.2 0.0020804 76757000.0 10837.7 10696.9 11297.900000000001 11284.0 12354.400000000001 13239.6 11168.6 13071.9 13054.3 11797.900000000001 15222.800000000001 True False 11937.935325706943 11598.365303773817 12064.643433791776 11980.987052176626 11486.669564366233 13131.781087175395 11593.627184692432 12811.170699792829 12505.673168551104 11052.978580557798 13350.49210527991 0.8941944035894884 0.8687593844714416 0.9036852977891653 0.8974191331447875 0.8603929708196625 0.9836177560812145 0.8684044822667872 0.9596028819586516 0.9367200152573631 0.8279079522609146 1.0 13.704605300845206 -10.338344200508596 0.14460206773928727 1.087530938471293 0.8447927886990473 0.0 0.060655780654704075 5.512672063113589 0.25290838575030705 0.31425578196726767 0.11354852485551886 4.588342191924655e-11 10.338344200508596 -0.24273814977224573 STSS(ph)TPVK ddPTM_A549_MK2206_60min_R1 1 STSSTPVK 8 0 A0A075B6H4;Q9H8E8-2;Q9H8E8 A0A075B6H4 CSRP2BP Cysteine-rich protein 2-binding protein 1 S(0.001)T(0.005)S(0.052)S(0.652)T(0.29)PVK 69.954 0.006824800000000001 4356400.0 1240.7 1025.3 1005.1 1107.1 1816.0 1829.6 1830.3 1960.8 1825.1 2077.3 1955.4 True False 1450.099827797314 1077.483390589619 1147.638293575432 1378.3395496996075 1548.8688056406525 2023.2070576098113 2162.841818213055 2238.7494046981556 1411.7177640858115 1608.0364872524929 1469.8202137054523 0.9865831305596059 0.7330715556518693 0.7808018170346209 0.9377606436808895 1.0537811299627706 1.3764996825763183 1.4715009346350452 1.5231450648336196 0.9604696893689038 1.094036176845462 1.0 10.521423982133104 -6.62016741043868 3.0398754987105003 1.0952179556483432 0.826518666105587 0.3277274294327084 0.20651676490448453 0.3398210336154248 6.288924947073391 0.03641784925444213 0.0823218044291475 2.3979084028300814e-07 6.62016741043868 -0.26869928954275624 STSSSS(ph)DTMSTFKPMVAPR ddPTM_A549_PD325901_60min_R1 1 STSSSSDTMSTFKPMVAPR 19 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 S(0.009)T(0.009)S(0.027)S(0.104)S(0.372)S(0.43)DT(0.037)MS(0.009)T(0.003)FKPMVAPR 52.72 0.0027144 10916000.0 1858.9 2136.3 2042.2 1968.1 2275.2 2606.7 1867.6 1959.3 2342.6 2676.2 2285.6 True False 2047.6141595501474 2316.333498345502 2180.7959727462226 2089.6650671205985 2115.3978010138935 2585.471899448631 1938.6725399899337 1920.2202244588855 2244.1486686109415 2507.2242752768516 2004.4856896121448 1.0215159779695646 1.1555749738446364 1.0879578657247448 1.042494380453739 1.055331954713635 1.2898430319793919 0.9671670643680447 0.9579615531355755 1.1195633275112928 1.250806772166073 1.0 10.969016402525284 -11.013764783220765 1.1455309058246734 0.997370900151229 1.0823163647994478 0.0 0.11516279202208435 1.0116360444778567 2.2364199886602263 0.07189426149802831 0.014270956544927937 9.688024240286257e-12 11.013764783220765 0.08494546464821884 STSST(ph)PVK ddPTM_A549_MK2206_60min_R1 1 STSSTPVK 8 0 A0A075B6H4;Q9H8E8-2;Q9H8E8 A0A075B6H4 CSRP2BP Cysteine-rich protein 2-binding protein 1 STS(0.004)S(0.038)T(0.958)PVK 82.426 0.0037499 4055200.0 1610.1 1526.5 1212.1 923.02 2640.6 2092.8 1719.3 2422.9 2467.9 2435.1 2571.4 True False 1881.8455168344135 1604.1923297913315 1383.9940062111032 1149.1599414359425 2252.171237981668 2314.2587069117903 2031.6745550203282 2766.3534948200518 1908.924590426482 1885.0092187496 1932.850412970338 0.9736115656992089 0.8299619665476667 0.7160378252366818 0.5945415815546496 1.1652072104848552 1.1973294422486203 1.0511287067984327 1.431229999102111 0.9876214825610391 0.9752483720935148 1.0 10.916514273573586 -6.771060123719999 24.991205420917034 1.0575300200030462 0.7777470289856027 0.5010743293227935 0.15499555430118353 153.76070274390779 399415.2718403374 0.023871041050754785 0.045521897081480606 1.6941032525895157e-07 6.771060123719999 -0.2797829910174435 STST(ph)PNVHMVSTTLPVDSR ddPTM_A549_PD325901_60min_R1 1 STSTPNVHMVSTTLPVDSR 19 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.171)T(0.171)S(0.144)T(0.513)PNVHMVSTTLPVDSR 63.559 0.00012470000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 STST(ph)PTS(ph)PGPR ddPTM_A549_MK2206_60min_R1 1 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 2 S(0.028)T(0.035)S(0.403)T(0.534)PT(0.159)S(0.841)PGPR 83.397 0.00093264 3432000.0 348.17 610.71 571.15 299.67 601.74 551.88 436.06 521.85 640.71 791.89 629.23 True False 406.932584060765 641.7925304466853 652.1476583181852 373.08916345269756 513.2248431201581 610.2795752917043 515.2864575479347 595.823835598599 495.59020800362725 613.0014990085093 472.97482513546163 0.8603683799538762 1.3569274649298166 1.3788210781227264 0.78881399944668 1.085099704774284 1.290300334942601 1.0894585296381363 1.2597368907065043 1.047815193676933 1.2960552368362175 1.0 8.885619585561818 -8.965020893814083 15.927971635386632 1.0210894157387975 1.1445520225940464 0.0 0.19642860658949396 6.706435266086679 3053.4246926341602 0.029989589181356434 0.03165590478687605 1.0838747677849659e-09 8.965020893814083 0.1234626068552489 STST(ph)PTS(ph)PGPR ddPTM_A549_PD325901_60min_R1 2 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 2 ST(0.001)S(0.059)T(0.923)PT(0.018)S(0.999)PGPR;S(0.001)T(0.001)S(0.089)T(0.898)PT(0.048)S(0.963)PGPR 110.84 5.5608000000000004e-08 6298700.0 460.24 550.0 506.8 451.58 611.76 423.69 480.94 438.94 429.15 525.72 561.37 True False 506.96322598921904 596.3504302251678 541.1944956359739 479.4730709874086 568.792088057428 420.23960911397165 499.242434880466 430.1849973582312 411.11431790932517 492.5259494800635 492.32504881762776 1.0297327491395094 1.211294106723532 1.0992625643072833 0.9738953403628668 1.1553181976489806 0.8535816126423444 1.0140504450859267 0.8737824703239605 0.83504651834527 1.0004080650840703 1.0 8.943467333543394 -7.260483283532937 24.996435309328337 0.9196440376578833 1.0940533840519673 0.5052944010774625 0.08068894184040869 56.788604765700214 1484689.112801436 0.012768122548820033 0.021318938922079915 5.489296841011157e-08 7.260483283532937 0.174409346394084 STSTPTS(ph)PGPR ddPTM_A549_MK2206_60min_R1 2 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 STS(0.001)T(0.005)PT(0.003)S(0.991)PGPR;STSTPT(0.003)S(0.997)PGPR 162.21 1.6648e-13 2370600000.0 9994.4 10004.599999999999 9092.400000000001 8722.2 12398.0 9272.5 9050.099999999999 10226.2 13422.2 13255.0 13352.2 True False 11681.210380380016 10513.791406898372 10381.839041394138 10859.139391554436 10574.27062353129 10253.709795412648 10694.386023608136 11675.795166424048 10382.093130849029 10260.686294002691 10036.48023802697 1.1638751936282772 1.0475576255371808 1.0344103505588191 1.0819668981572357 1.053583564431951 1.0216439979189738 1.0655514453252688 1.1633356405352067 1.0344356671487853 1.0223391119853185 1.0 13.29296578893287 -8.981675306298442 17.57935418306282 1.0151900031100234 1.0749455021611332 0.2698732312199609 0.04454954244239008 4.486348836203784 4304.680822211821 0.007868595585234813 0.008034885057553636 1.0430969936348164e-09 8.981675306298442 0.05975549905110977 STSTPTS(ph)PGPR ddPTM_A549_PD325901_60min_R1 5 STSTPTSPGPR 11 0 H3BUF6;H3BRB0;A0A0C4DGL7;Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 H3BUF6;Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 STST(0.007)PT(0.002)S(0.99)PGPR;STS(0.003)T(0.009)PT(0.005)S(0.983)PGPR;S(0.001)T(0.007)S(0.027)T(0.222)PT(0.056)S(0.687)PGPR;STS(0.001)T(0.007)PT(0.007)S(0.984)PGPR;ST(0.001)S(0.023)T(0.171)PT(0.049)S(0.755)PGPR 147.28 1.7076000000000002e-11 2814133200.0 15375.100000000002 13039.760000000002 14091.65 14465.050000000001 16610.489999999998 15884.649999999998 14153.800000000001 16460.899999999998 16065.730000000001 16499.6 17338.100000000002 True False 16935.9688334496 14138.666338241697 15047.99410897528 15358.523285987907 15443.826485479634 15755.29067693892 14692.430604256537 16132.574436173754 15390.543238181011 15457.812440160653 15205.623615271414 1.1137963994084632 0.9298314029055578 0.9896334730962416 1.0100554685940624 1.0156654456426888 1.0361489324985962 0.9662497886308679 1.0609610525918436 1.0121612653047574 1.0165852339417345 1.0 13.892317365152635 -6.436249174786796 24.993709507648063 1.0100941522257791 1.0024419930783945 0.0 0.045928917054136806 579.2032824371112 167094.636858902 0.005765269082223843 0.013397274155032725 3.66227392801579e-07 6.436249174786796 -0.007652159147384596 STT(ph)HLI ddPTM_A549_PD325901_60min_R1 1 STTHLI 6 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3 Q9H8V3-2 ECT2 Protein ECT2 1 S(0.018)T(0.459)T(0.523)HLI 97.075 0.036808 12889000.0 1130.3 1062.2 1279.5 1586.4 1477.0 1600.2 1410.7 1643.2 1689.0 2129.0 1816.8 True False 1245.047223917118 1151.7153217912235 1366.3345642585411 1684.3883250241931 1373.2606153733832 1587.1685017446187 1464.3849604646605 1610.4250869345378 1618.0172036557155 1994.574576662588 1593.3451176440951 0.7814046123027212 0.7228285379216141 0.8575258110300613 1.0571396657082766 0.8618726728857545 0.9961234914952957 0.9190632614670989 1.010719566716153 1.0154844582874176 1.2518157896713218 1.0 10.6378430722958 -6.026893460685405 3.905517126875541 0.9926541947705695 0.7553297613692136 0.5433104359812412 0.0939118105447285 0.06993778880133822 2.334512850079873 0.0070612387936372905 0.02174982681016121 9.399538678542068e-07 6.026893460685405 -0.2373244334013559 STT(ph)PAEQR ddPTM_A549_MK2206_60min_R1 2 STTPAEQR 8 0 R4GN18;P15529-16;P15529-7;P15529-4;P15529-6;P15529-3;P15529-5;P15529-2 R4GN18 CD46 1 ST(0.004)T(0.996)PAEQR;S(0.333)T(0.308)T(0.359)PAEQR 143.7 0.0010059 35496000.0 5178.9 4397.0 3210.8999999999996 2800.0 4508.6 4162.9 3148.8 4210.4 4887.6 7143.1 7584.8 True False 6052.97170805151 4620.788518894522 3666.253901941452 3486.0001256967766 3845.3909125063046 4603.415314890623 3720.896201272616 4807.2370938092145 3780.5664038933814 5529.468748901594 5701.28483016933 1.0616855477946248 0.8104819626696818 0.6430574881193163 0.6114411452046751 0.674477951383477 0.8074347190182218 0.6526416960582031 0.8431848674479289 0.6631077935078534 0.9698636208528748 1.0 12.477071363454229 -10.880777405599604 1.0280415481206338 1.0062566432625315 0.7393799031817905 0.34088220775699707 0.1237077865727788 0.4826374463516288 0.8698143351251525 0.09704322026779201 0.02121565648735727 1.3158991136633127e-11 10.880777405599604 -0.266876740080741 STT(ph)PAEQR ddPTM_A549_PD325901_60min_R1 2 STTPAEQR 8 0 R4GN18;P15529-16;P15529-7;P15529-4;P15529-6;P15529-3;P15529-5;P15529-2 R4GN18 CD46 1 S(0.001)T(0.004)T(0.995)PAEQR;S(0.037)T(0.037)T(0.925)PAEQR 162.88 0.00017448 51503000.0 4982.8 4772.6 4617.4 4834.299999999999 4976.0 4074.2 3263.5 3668.5 4813.7 5295.7 5965.9 True False 5488.650187856516 5174.803751441154 4930.7645306818185 5132.903731508107 4626.502926268083 4041.0210659967024 3387.694278355723 3595.3288896174213 4611.396929092672 4961.328598230182 5232.132120956027 1.049027444447182 0.989043019520616 0.9424006154074064 0.9810348081520179 0.8842481075234616 0.7723469080246234 0.6474787333422145 0.6871632455948904 0.8813609485553409 0.9482422239222118 1.0 12.353183256660431 -6.751434574922971 6.1884065739974625 0.8834631937502696 0.987480188364405 0.2583263623327692 0.10878873458103275 0.2823011687712001 40.73729316018445 0.019705081273026257 0.03991383785620322 1.772415033689762e-07 6.751434574922971 0.10401699461413538 STT(ph)PGGTGIKPFLER ddPTM_A549_MK2206_60min_R1 2 STTPGGTGIKPFLER 15 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.034)T(0.034)T(0.918)PGGT(0.014)GIKPFLER;S(0.09)T(0.09)T(0.821)PGGTGIKPFLER 139.88 7.0728e-11 27608000.0 3043.2 3015.7 3025.6 3010.7 4362.8 3874.7999999999997 3199.8999999999996 3026.3 4784.200000000001 4839.1 4843.5 True False 3556.8177609033487 3169.1862489038463 3454.6755756062353 3748.3216351554593 3721.037899366213 4284.828764115926 3781.280409823502 3455.287292655055 3700.586338797511 3745.94394909909 3640.7252762004455 0.9769530769471667 0.8704821178408964 0.9488976271265442 1.0295535506780407 1.022059512067767 1.1769162568035574 1.0386063553165823 0.9490656477824335 1.0164420707567197 1.028900470350362 1.0 11.830010165895882 -6.145874891422939 4.174501807896235 1.0201619210526263 0.9210111580975184 0.36676961693230525 0.05751453081063942 0.20211246734020877 5.936648856684598 0.00820141705904422 0.023075362835430553 7.147021829284244e-07 6.145874891422939 -0.09915076295510783 STT(ph)PGGTGIKPFLER ddPTM_A549_PD325901_60min_R1 1 STTPGGTGIKPFLER 15 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.041)T(0.041)T(0.906)PGGT(0.011)GIKPFLER 62.94 0.0018469 24149000.0 1926.6 2017.5 1900.7 1851.3 2416.5 1986.0 2265.6 2314.7 2001.2 2154.6 2407.1 True False 2122.1870137120404 2187.5218054168663 2029.692931837598 1965.6505963926438 2246.7733764724303 1969.8266744562009 2351.8186477838904 2268.531492652979 1917.09652336046 2018.558188293663 2111.041959864104 1.0052794089647816 1.036228481956695 0.9614649876349486 0.9311281508204511 1.064295934987983 0.933106357858944 1.1140558513272216 1.0746027486819891 0.9081280996820504 0.9561904626583575 1.0 11.043739539181473 -8.769385316360756 24.999977366822993 0.9566160523726817 1.0133588523577746 0.1749222936294409 0.05815524079571614 254.199003356195 799773.9285032074 0.010832387452559896 0.011631315274483602 1.7006489827533992e-09 8.769385316360756 0.05674279998509291 STT(ph)PPPAEPVSLPQEPPK ddPTM_A549_MK2206_60min_R1 2 STTPPPAEPVSLPQEPPK 18 0 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.188)T(0.252)T(0.56)PPPAEPVSLPQEPPK;S(0.014)T(0.014)T(0.972)PPPAEPVSLPQEPPK 196.78 1.6935e-48 52960000.0 7676.4 7359.6 6449.0 5898.0 10160.900000000001 8814.400000000001 8128.5 8868.1 11171.0 9028.8 8649.2 True False 8971.98865003893 7734.172204606804 7363.565172886237 7343.01026477128 8666.245070062836 9747.133957474822 9605.34323299176 10125.180332417236 8640.786336421346 6989.187809226063 6501.364934223784 1.3800161567318816 1.189622838104874 1.1326183420536433 1.129456712407728 1.3329885582092036 1.499244244260926 1.4774348663968004 1.5573930143680066 1.32907265225729 1.0750339167140632 1.0 12.666526922358624 -10.455427801413135 0.9623129737258413 1.014262180789278 1.3311032832120904 0.4060844557852896 0.13788530522164721 0.42129723549461495 0.7415920053231406 0.08214783038844643 0.028599765573157458 3.504065362301789e-11 10.455427801413135 0.3168411024228124 STT(ph)PPPAEPVSLPQEPPK ddPTM_A549_PD325901_60min_R1 1 STTPPPAEPVSLPQEPPK 18 0 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.031)T(0.031)T(0.938)PPPAEPVSLPQEPPK 155.61 1.615e-22 29963000.0 5246.1 6619.1 7082.7 6152.8 6709.8 6590.6 5214.7 6631.1 6890.8 7067.6 8083.0 True False 5778.680210025302 7176.914786733468 7563.374613735031 6532.844481977346 6238.526795553372 6536.9283387064625 5413.148262093335 6498.8375085026855 6601.2036394024935 6621.3505298358405 7088.842242358666 0.8151796883693331 1.0124241083894536 1.066940743657807 0.9215671979467942 0.8800487558145504 0.9221432943796806 0.7636152811735053 0.9167699444162453 0.9312104027308807 0.934052459267696 1.0 12.791334308798643 -10.115558943844713 0.9557164698298187 0.9931697217911183 0.9176771786832909 0.041790739908598384 0.08014578114078352 0.8134665896234828 1.485117909644999 0.032959338480297445 0.015528294424257941 7.663745182877217e-11 10.115558943844713 -0.07549254310782738 STT(ph)PPPAEPVSLPQEPPKPR ddPTM_A549_MK2206_60min_R1 2 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.038)T(0.038)T(0.923)PPPAEPVSLPQEPPKPR;S(0.024)T(0.024)T(0.952)PPPAEPVSLPQEPPKPR 268.06 1.3039999999999996e-111 2376600000.0 36040.0 40829.0 33895.0 35354.0 54313.0 45710.0 40054.0 43628.0 60316.0 51365.0 55495.0 True False 42122.670906597275 42907.02170524095 38701.820675295254 44015.731587101356 46323.62964799606 50547.001860157674 47331.29333262619 49812.4026051464 46654.52230485986 39761.61082545821 41714.05991591699 1.009795521977576 1.0285985538623816 0.927788394447975 1.0551773592842282 1.1105039821434446 1.2117497544483862 1.1346604341085922 1.1941394030107173 1.118436383293819 0.9531944602276947 1.0 15.348246112191763 -6.493169086834075 9.051344017043718 1.0887440201396867 0.9923896840632477 0.2979080729181889 0.07491762942912551 0.4425993951864215 127.82302891058647 0.011337742884556431 0.025907669578722564 3.212409585791001e-07 6.493169086834075 -0.09635433607643906 STT(ph)PPPAEPVSLPQEPPKPR ddPTM_A549_PD325901_60min_R1 4 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.018)T(0.122)T(0.86)PPPAEPVSLPQEPPKPR;S(0.139)T(0.139)T(0.722)PPPAEPVSLPQEPPKPR;S(0.13)T(0.13)T(0.74)PPPAEPVSLPQEPPKPR;S(0.044)T(0.044)T(0.912)PPPAEPVSLPQEPPKPR 261.88 2.4667999999999995e-111 3360530000.0 79582.0 79852.0 80115.0 81778.0 96665.0 79966.0 81500.0 82901.0 85495.0 90957.0 95211.0 True False 87661.10605482783 86581.4082806183 85552.08567063154 86829.2413286867 89875.5838761463 79314.7834086428 84601.52709851132 81247.47452042376 81901.9424668711 85213.95949718117 83500.65059225669 1.0498254257070059 1.0368950141886355 1.024567893349625 1.0398630515190104 1.076345911542883 0.9498702446756498 1.013184047051685 0.9730160656731233 0.9808539440825166 1.0205185096495928 1.0 16.34949981788543 -7.257719986156683 24.999996681684642 0.988537128794786 1.0435454353160538 0.6255842949498593 0.02151106764592093 144.18701391852656 969151.967220033 0.0027477680861300547 0.004642760224962768 5.524335091340761e-08 7.257719986156683 0.05500830652126787 STT(ph)PTSSPFR ddPTM_A549_MK2206_60min_R1 4 STTPTSSPFR 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.201)T(0.031)T(0.605)PT(0.122)S(0.03)S(0.011)PFR;S(0.002)T(0.02)T(0.978)PTSSPFR;S(0.27)T(0.05)T(0.68)PTSSPFR;S(0.072)T(0.072)T(0.855)PTS(0.001)SPFR 175.64 1.0117000000000001e-10 358890000.0 17599.0 19583.2 18622.9 17942.300000000003 27071.5 19866.2 18678.300000000003 20581.6 29162.3 27587.800000000003 30377.600000000002 True False 20569.280945760416 20579.901233389857 21263.90725044862 22338.16430546045 23089.318211399215 21968.428097883712 22071.905334168656 23499.10482850651 22557.085612623752 21355.69681944078 22834.00354089124 0.9008179800324919 0.9012830884665176 0.931238677105796 0.9782850504274102 1.0111813362054864 0.9620926990986293 0.9666244158472772 1.0291276685853272 0.9878725634875382 0.9352585402378911 1.0 14.478896212489635 -6.1566256993549855 2.1267221197207458 0.9933713884222456 0.9003993299727328 0.6297575807838003 0.024867718507294766 0.09635647042361054 0.8337761373101422 0.00249863242639584 0.008701404577901846 6.972271668029708e-07 6.1566256993549855 -0.09297205844951284 STT(ph)PTSSPFR ddPTM_A549_PD325901_60min_R1 2 STTPTSSPFR 10 0 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.001)T(0.001)T(0.998)PTSSPFR;S(0.054)T(0.078)T(0.867)PT(0.001)SSPFR 167.09 7.5565e-10 633910000.0 13651.7 13211.099999999999 12773.400000000001 13102.400000000001 14951.5 13634.6 13027.9 14301.099999999999 13425.5 13304.7 14795.0 True False 15037.610534149624 14324.445761359475 13640.279736694054 13911.705490290586 13901.358219874834 13523.56433813723 13523.683863640419 14015.853341504082 12861.272923433875 12464.638971405693 12975.30879323227 1.1589404748496637 1.1039772532296799 1.0512489493744166 1.072167584755033 1.0713701262451323 1.0422537570120043 1.0422629687776042 1.0801942030708775 0.9912113174633751 0.9606429542476141 1.0 13.663481252557558 -2.0000000000799294 0.18598397333757366 0.9827526061330095 1.6840559892035463 0.7600069726165174 0.02585939216842437 17.920139028977147 0.19167675109319046 0.025294901651745326 3.6266545919576765 0.009999999998159557 2.0000000000799294 0.7013033830705367 STT(ph)SVSEEDVSSR ddPTM_A549_MK2206_60min_R1 1 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 S(0.013)T(0.002)T(0.491)S(0.491)VS(0.002)EEDVSSR 270.24 6.547699999999999e-83 71812000.0 3325.1 4904.5 4743.8 4874.3 7912.7 7245.7 7135.2 7114.1 10959.0 10461.0 10480.0 True False 3886.295589110057 5154.118101186758 5416.542171986 6068.50371881564 6748.752311890307 8012.435164693606 8431.573480475216 8122.545461017518 8476.803997926903 8097.852834519965 7877.526766714291 0.4933395600166304 0.6542812552494235 0.6875942579939001 0.7703564708224797 0.8567095373647592 1.0171257301910235 1.0703325713981695 1.0311035051430775 1.076074286887199 1.0279689392788407 1.0 12.943527035985557 -6.534890795688503 0.8677726732199663 1.0423085225514328 0.5418361451121354 0.9551637949733519 0.04051130081567221 0.11281015345526872 0.14631725242401536 0.007510786575564235 0.03525983565693585 2.918160699739363e-07 6.534890795688503 -0.5004723774392974 down STT(ph)SVSEEDVSSR ddPTM_A549_PD325901_60min_R1 1 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 S(0.002)T(0.002)T(0.497)S(0.497)VS(0.004)EEDVSSR 225.44 4.3483999999999995e-46 124020000.0 6099.9 6076.1 6545.0 6371.0 8795.3 6988.6 6526.9 6688.7 7061.1 7685.7 8527.1 True False 6719.15735749096 6588.154271074805 6989.183058282256 6764.522200409188 8177.548470137785 6931.687158662947 6775.284751156721 6555.288631316356 6764.346522636697 7200.423590350231 7478.320757740518 0.8984847768847334 0.8809670625929844 0.9345925756190686 0.904550957299805 1.0935006313648052 0.9269042320079983 0.9059901240721572 0.876572273866594 0.9045274656927741 0.9628396298590635 1.0 12.86849863679923 STTLFSR ddPTM_A549_PD325901_60min_R1 2 STTLFSR 7 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 ; 91.9 0.034192 6435200.0 2937.7 2877.5 2891.1000000000004 3321.2 3272.0 2800.5 2881.3 2810.1 3282.2 3945.3 3573.3999999999996 False True 3235.933141379563 3119.99702358713 3087.3074315966137 3526.342981007532 3042.186007787211 2777.693656502816 2990.949448207857 2754.0503510191975 3144.2605481579562 3696.1930846908904 3133.8944536489485 1.0325597078139648 0.9955654441247577 0.9851344636070652 1.125227104219045 0.9707365875851509 0.8863392490033 0.9543874219265255 0.8787948642662552 1.0033077356823354 1.1794248783290164 1.0 11.61374087680143 STTQANRMS(ph)VDAVEIETLR ddPTM_A549_MK2206_60min_R1 2 STTQANRMSVDAVEIETLR 19 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;P78347-5 P78347-2 GTF2I General transcription factor II-I 1 S(0.004)T(0.004)T(0.004)QANRMS(0.989)VDAVEIETLR;S(0.067)T(0.067)T(0.131)QANRMS(0.735)VDAVEIETLR 73.389 0.0001214 6952100.0 1230.49 1404.3899999999999 1140.4 1467.44 1689.99 1298.1 1013.77 1278.1799999999998 1972.31 1819.6599999999999 1769.04 True False 1438.166629407849 1475.8674523653133 1302.1258680662838 1826.9628658758852 1441.394709716216 1435.4640803909583 1197.9588865485707 1459.3659292620812 1525.5849341318744 1408.5975421912442 1329.7385449797962 1.0815409050428784 1.1098929619940718 0.9792345066496272 1.3739263803198574 1.0839685103195353 1.0795085137678464 0.90089806832423 1.0974833622531823 1.1472818772468192 1.0593041372750809 1.0 10.376926893590499 -6.9857444007405105 24.99499634328542 1.0609320194089078 1.13630036548866 0.12616876571559132 0.10587100540955433 469.9756294074166 824024.6790902073 0.01576798280283804 0.02979039206048452 1.033369405070644e-07 6.9857444007405105 0.07536834607975229 STTQANRMS(ph)VDAVEIETLRK ddPTM_A549_PD325901_60min_R1 1 STTQANRMSVDAVEIETLRK 20 2 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;P78347-5 P78347-2 GTF2I General transcription factor II-I 1 S(0.105)T(0.105)T(0.105)QANRMS(0.686)VDAVEIETLRK 43.494 0.01163 3212600.0 750.39 1058.6 997.72 884.35 1095.2 1275.7 1077.7 982.55 1208.8 1103.0 1154.2 True False 826.5690403920789 1147.8119371570228 1065.4312789777503 938.9742909954273 1018.2769302348873 1265.3111221569868 1118.7124632400676 962.9522694544359 1157.9983397152332 1033.3563917608421 1012.2407170766269 0.8165735940550072 1.1339317988234345 1.0525473447212623 0.9276195623776184 1.0059632190806285 1.2500101021535992 1.1051842159352505 0.9513075824843945 1.1439950203342517 1.0208603292951877 1.0 9.983336697260134 -7.031644759585375 24.936548800405163 1.0764776211557603 0.9945048525258728 0.1592405310872297 0.10403138383279964 1063.7740119996204 838269.0182833469 0.015441466470018154 0.026762945976779192 9.29726565467112e-08 7.031644759585375 -0.08197276862988745 STTS(ph)VSEEDVSSR ddPTM_A549_MK2206_60min_R1 1 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 STT(0.076)S(0.849)VS(0.075)EEDVSSR 190.34 1.4435999999999999e-25 77567000.0 2589.9 3051.2 3058.2 2442.9 5219.2 4253.3 3976.5 3950.1 5469.8 6766.3 5931.6 True False 3027.0118030243143 3206.4930472710857 3491.898745808759 3041.410609665948 4451.4625938324325 4703.38138288796 4698.978577350277 4510.0387716739015 4230.899033475737 5237.788130600557 4458.620016168181 0.678912262549295 0.7191671493967777 0.7831792646931506 0.6821416937610646 0.9983947000843774 1.054896215831851 1.0539087341622497 1.0115324372382626 0.9489256806216576 1.1747554426272926 1.0 12.122381536534313 -6.76554725578853 24.99999249126034 0.9914845508592263 0.7208962324507272 0.8280540727604069 0.06808165743510394 23.511613623657883 143089.7618026282 0.006622758746994659 0.01284520734475156 1.7157450089355834e-07 6.76554725578853 -0.27058831840849906 STTS(ph)VSEEDVSSR ddPTM_A549_PD325901_60min_R1 1 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 STT(0.026)S(0.965)VS(0.009)EEDVSSR 185.2 3.3016e-25 120570000.0 3579.0 3777.3 4089.2 4152.3 4530.9 4032.5 3435.8 4332.7 4095.5 4824.8 4884.7 True False 3942.337445279453 4095.6263274355006 4366.71770235719 4408.778140442489 4212.665214756437 3999.660656971112 3566.551249141903 4246.280899562606 3923.3803774848907 4520.16130459448 4283.912866664529 0.9202655534749407 0.9560479997867862 1.0193292530146938 1.0291474821417599 0.9833685571752617 0.9336465940039679 0.8325452361310125 0.9912155152839922 0.9158403776171221 1.0551478158597316 1.0 12.064713421120613 -7.23542891499295 18.155298529693912 0.9496064866983884 0.9849447408206494 0.04355673444534536 0.05928749329580952 53.87335390756868 37600.927148980125 0.008244167387754188 0.014264182748926744 5.815286087015914e-08 7.23542891499295 0.03533825412226099 STTSQVTPAEEKDGHS(ph)PMSK ddPTM_A549_PD325901_60min_R1 1 STTSQVTPAEEKDGHSPMSK 20 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 STTSQVT(0.001)PAEEKDGHS(0.998)PMS(0.002)K 74.84100000000001 0.00011576 5928100.0 667.32 913.11 1059.1 776.14 1149.6 925.5 1014.3 1060.0 1119.6 846.85 1390.9 True False 735.0658351449804 990.0609842598242 1130.976894885675 824.0804050581679 1068.8560619046996 917.9630348485467 1052.8997415462575 1038.8574684460873 1072.547105513877 793.3797464756751 1219.8281176415526 0.602597877942161 0.8116397465685853 0.9271608667886219 0.6755709211322874 0.8762349764254113 0.752534739585574 0.8631541823957635 0.8516425006292209 0.8792608483132588 0.6504029010329883 1.0 10.252462160896187 -14.999999820781184 0.03068519580087642 2.2297034708958776 1.6112100691160773e-05 0.0 0.13124883237884713 520.55194874486 1.234904528263763 69.86690778041934 28.48173642102881 1.0000004126666587e-15 14.999999820781184 -2.2296873587951866 STTSVS(ph)EEDVSSR ddPTM_A549_MK2206_60min_R1 2 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 STTS(0.001)VS(0.999)EEDVSSR;STTS(0.001)VS(0.999)EEDVSSR 139.86 2.9654e-09 29185000.0 2205.36 1935.1399999999999 2059.1 1541.19 2400.7 2123.7 2173.25 1763.98 3038.8 3329.5 2814.3 True False 2577.570852124675 2033.6303603487706 2351.1113424546534 1918.7816191866493 2047.5602101880586 2348.428524402031 2568.1013939963514 2014.0295669621846 2350.516651966446 2577.363637561825 2115.4316392713768 1.2184609534404403 0.9613311640971858 1.1114097467429638 0.9070402387701547 0.9679160376429392 1.1101415336734333 1.2139845818326178 0.9520655404661914 1.1111286265795097 1.218362999642736 1.0 11.046736350040735 STTSVS(ph)EEDVSSR ddPTM_A549_PD325901_60min_R1 2 STTSVSEEDVSSR 13 0 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 STTS(0.001)VS(0.999)EEDVSSR;STTS(0.012)VS(0.988)EEDVSSR 234.82 2.3008000000000003e-56 34158000.0 4346.8 5006.6 4635.4 4884.299999999999 5369.4 5099.7 4819.8 5109.0 4962.2 4687.200000000001 6153.9 True False 4788.083936054969 5428.523752664226 4949.986118924613 5185.992117949866 4992.271867424401 5058.169734000147 5003.22012649576 5007.096987067036 4753.655990515331 4391.249392077442 5397.0093127862165 0.8871735545668553 1.0058392413374844 0.9171720543815726 0.9609010875085163 0.9250070878323408 0.937217158772857 0.9270356667057219 0.9277540016847058 0.8807944761654019 0.8136449536364523 1.0 12.397944461411011 -11.078466310644336 1.4196517895786374 0.9997475247660633 0.9260708898877016 0.0 0.06376756094822153 0.3415396594651901 1.2359986946968455 0.023569829043906736 0.005266578991654177 8.347062961103869e-12 11.078466310644336 -0.07367663487836174 STTSVSEEDVS(ph)SRYSR ddPTM_A549_PD325901_60min_R1 1 STTSVSEEDVSSRYSR 16 1 Q96IZ0 Q96IZ0 PAWR PRKC apoptosis WT1 regulator protein 1 STTSVSEEDVS(0.327)S(0.327)RY(0.02)S(0.327)R 41.513000000000005 0.025039 2226700.0 676.01 732.79 864.14 656.61 816.01 735.22 696.97 636.68 853.51 919.98 713.46 True False 744.6380375477404 794.5447850267288 922.7857368959556 697.1673084304938 758.6962726816753 729.2326120814142 723.4935747466184 623.9809179342027 817.639942860977 861.8923057952309 625.7089429955727 1.190070952131188 1.2698312752617167 1.4747843182137241 1.1142038422733982 1.2125386430461225 1.1654501989219197 1.1562781431297804 0.9972382925308737 1.3067416600225297 1.3774652183632436 1.0 9.289347913794654 -10.979948031452926 1.1265295700961526 0.9942214685227181 1.2171401849417383 0.0 0.15931043881382465 0.5211276160709313 1.1239733876046785 0.09497969542386572 0.019582958784027816 1.0472538570463116e-11 10.979948031452926 0.22291871641902017 STTTGHLIYK ddPTM_A549_MK2206_60min_R1 2 STTTGHLIYK 10 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 60.518 0.008566599999999999 3795400.0 3260.8999999999996 4642.0 5001.2 4096.1 4355.7 3165.6 3741.0 3311.0 5113.700000000001 5090.0 4570.5 False True 3811.2601986493623 4878.257972414912 5710.445362480797 5099.644683880918 3714.982299960898 3500.581690844785 4420.691275711653 3780.3443895122373 3955.4551149008903 3940.1654648414706 3435.5187106171443 1.1093696526440169 1.419948014644519 1.662178507377418 1.4843885635438254 1.081345384171566 1.0189383280104312 1.286760937162102 1.1003707759848438 1.1513414561466169 1.1468909928112931 1.0 11.746312224968387 -6.765554039307974 24.982318934137485 1.088316568239127 1.4364129346107828 0.5156060079852851 0.14145044663706655 57.07274291350258 346522.5773097997 0.02084725291980181 0.04043059385526886 1.7157182098413797e-07 6.765554039307974 0.34809636637165586 STTTGHLIYK ddPTM_A549_PD325901_60min_R1 1 STTTGHLIYK 10 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 71.34899999999999 0.0028689 7418300.0 2357.4 2409.9 2258.5 2930.4 4345.3 3526.0 3274.5 3333.4 3031.6 3109.4 2615.2 False True 2596.721512573844 2612.9907305447855 2411.7753914637856 3111.4041525787316 4040.101118471198 3497.2854250415744 3399.112889375155 3266.912721998289 2904.192394672982 2913.0719533464776 2293.546979118691 1.1321858833568124 1.1392793582753828 1.0515482845659976 1.3565905477001858 1.76150789813934 1.5248370566995872 1.4820332525655455 1.4243932004626385 1.2662450000430927 1.2701165399567453 1.0 11.163364743356178 -9.906555465772904 0.8961581893988422 1.0315336386096432 1.3586760948120247 0.10476418006727073 0.20612038501956342 0.5112512972347666 0.8408392467024755 0.08227827634015485 0.04353776494359837 1.2400652404922097e-10 9.906555465772904 0.32714245620238147 STTTRDS(ph)PVLR ddPTM_A549_MK2206_60min_R1 2 STTTRDSPVLR 11 1 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 S(0.001)T(0.001)T(0.001)T(0.007)RDS(0.99)PVLR;S(0.032)T(0.032)T(0.028)T(0.028)RDS(0.88)PVLR 61.211999999999996 0.0022050999999999998 9479500.0 1547.28 1860.81 1570.9 1404.76 1771.46 1361.17 1606.01 1445.5900000000001 2527.4 2589.8 2798.8999999999996 True False 1808.4230366359545 1955.5172808378709 1793.6772414462685 1748.9262630620733 1510.880580638872 1505.2081059284806 1897.801228469839 1650.5068094337043 1954.9479354284574 2004.7623813057846 2103.855884289754 0.8595755299305896 0.9294920319592322 0.8525665920561856 0.8312956586627118 0.7181483256154373 0.7154520978211525 0.9020585690500005 0.7845151475244242 0.9292214119925011 0.9528991012531152 1.0 11.038820166981708 -9.046423742230035 1.5161953266399537 0.9776579346109181 0.8231006475335509 0.4500476169158938 0.06602447421839887 0.2213868392918546 1.0364478636073096 0.014696348846376975 0.014128950740265937 8.986203674726636e-10 9.046423742230035 -0.15455728707736716 STTTRDS(ph)PVLR ddPTM_A549_PD325901_60min_R1 2 STTTRDSPVLR 11 1 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 S(0.019)T(0.019)T(0.017)T(0.12)RDS(0.826)PVLR;S(0.01)T(0.01)T(0.009)T(0.029)RDS(0.942)PVLR 57.794 0.0035092 22843100.0 4692.8 4430.2 4117.7 4303.0 4937.2 4749.9 4508.8 4629.1 5035.5 4601.3 5041.1 True False 5169.209601343233 4803.548501788253 4397.151883741611 4568.786537177954 4590.428104415345 4711.218389224325 4680.38485131003 4536.768969041304 4823.875446422949 4310.773132737232 4421.076658165815 1.1692196270326145 1.0865110182869153 0.994588473289642 1.0334103863002049 1.0383054760963564 1.0656269396556632 1.0586527249341555 1.0261683566743416 1.0911087545865454 0.9750505286478464 1.0 12.110182034424966 STVGSSDNS(ph)SPQPLK ddPTM_A549_MK2206_60min_R1 1 STVGSSDNSSPQPLK 15 0 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSS(0.001)DNS(0.568)S(0.431)PQPLK 125.61 1.3469000000000002e-07 4443200.0 1559.5 1943.1 1952.8 1745.8 2577.8 2003.7 1830.9 1987.4 2869.6 2823.1 2883.0 True False 1822.7054738856384 2041.9954903488617 2229.7364040335315 2173.5210783719413 2198.6090347910113 2215.7302040515865 2163.550830446529 2269.12003615724 2219.640181809569 2185.359749271898 2167.071533247834 0.8410915126340628 0.9422833805991082 1.0289168446100072 1.0029761570050442 1.0145530505381664 1.0224536523401362 0.998375363827502 1.047090509631892 1.0242579203109874 1.0084391381380269 1.0 11.081531061055651 -5.404971299137947 2.346801803825782 1.014495659604091 0.8249815757227608 0.9270800891558918 0.014697014724983392 0.07867350253544897 0.6316033954959149 0.002134964792589994 0.026476965592277343 3.935760845351801e-06 5.404971299137947 -0.1895140838813303 STVGSSDNS(ph)SPQPLKR ddPTM_A549_PD325901_60min_R1 1 STVGSSDNSSPQPLKR 16 1 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGS(0.009)S(0.008)DNS(0.585)S(0.398)PQPLKR 116.82 6.4607e-08 40727000.0 5002.2 5672.3 4628.1 5261.2 6257.8 4657.9 4998.5 5351.6 5376.4 5149.2 6584.4 True False 5510.019661574987 6150.324627938581 4942.190697026145 5586.17237494786 5818.273716238019 4619.967606721825 5188.720652784155 5244.85813975102 5150.448604934628 4824.07863323203 5774.560541950562 0.9541885692506367 1.0650723259818993 0.8558557246257125 0.9673761898184087 1.0075699568772192 0.8000552722859267 0.8985481432032024 0.9082696599418427 0.8919204444248292 0.8354018627368183 1.0 12.49549544277994 -5.7516429307399095 24.999917979954862 0.9324901991966623 1.0096304149756388 0.17508497927709687 0.06992320675934456 281.43089939908265 718178.4467597216 0.009301001658023314 0.035148741774897 1.7715649091166872e-06 5.7516429307399095 0.07714021577897645 STVGSSDNSS(ph)PQPLK ddPTM_A549_MK2206_60min_R1 1 STVGSSDNSSPQPLK 15 0 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSS(0.001)DNS(0.134)S(0.865)PQPLK 95.264 2.0025999999999998e-05 4327500.0 2007.1 1547.6 1990.6 1893.7 2571.6 2102.0 2019.5 1784.1 3040.5 3012.0 3428.8 True False 2345.8494111162986 1626.3662296659463 2272.8970124278703 2357.656585011424 2193.32104657792 2324.4322448053244 2386.417009168585 2037.0016385771007 2351.83160468079 2331.58710807515 2577.334329934157 0.9101843652453999 0.6310264876297578 0.8818789964614082 0.9147655225124227 0.8510036983187791 0.9018745522489924 0.9259245032558702 0.7903521149423948 0.9125054430718238 0.904650623318518 1.0 11.33166397934993 -14.999998952208294 0.035443950325695014 1.8214591573707464 0.35321373326134714 0.1579663970302836 0.0836256161651482 527.895211952341 1.442657532667662 49.742012653087365 17.67649660671353 1.0000024126324729e-15 14.999998952208294 -1.4682454241093992 STVGSSDNSS(ph)PQPLKR ddPTM_A549_MK2206_60min_R1 2 STVGSSDNSSPQPLKR 16 1 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSSDNS(0.134)S(0.866)PQPLKR;STVGSSDNS(0.142)S(0.858)PQPLKR 149.34 5.0798e-15 50112000.0 10623.599999999999 11733.599999999999 12800.099999999999 10094.0 15907.5 11969.400000000001 10314.5 12394.2 18482.8 20053.6 19491.5 True False 12416.603957916943 12330.790121742271 14615.346653661212 12567.030453136873 13567.527822537824 13235.993963355317 12188.511136949437 14151.11580564559 14296.475310966636 15523.477832169936 14651.222611966756 0.8474790320758193 0.8416219211406144 0.9975513334787337 0.8577461953838879 0.9260338322520746 0.9034054231449931 0.8319108554800173 0.965865865288765 0.9757871878412133 1.059534637026861 1.0 13.83873343891536 -8.439328737334277 6.094931202740646 0.987744714192773 0.890227798262679 0.5466828938743566 0.049627065219327186 0.13762649468462704 8.11541405677619 0.007102549779309816 0.00857357394218864 3.6363967644006364e-09 8.439328737334277 -0.09751691593009404 STVGSSDNSS(ph)PQPLKR ddPTM_A549_PD325901_60min_R1 1 STVGSSDNSSPQPLKR 16 1 Q9UHG0 Q9UHG0 DCDC2 Doublecortin domain-containing protein 2 1 STVGSSDNS(0.248)S(0.752)PQPLKR 95.205 2.5265e-06 37985000.0 4692.0 5356.9 4868.5 4598.7 6151.7 5843.8 5016.9 6312.6 5953.0 5458.0 6005.3 True False 5168.328385932162 5808.344763042182 5198.90568666878 4882.751254594526 5719.6258142128945 5796.210030305718 5207.820874853016 6186.6902408610995 5702.816112115145 5113.380948531894 5266.686170733208 0.9813245404012076 1.1028461872892583 0.9871303354961452 0.9271012352563941 1.0860008796416722 1.1005421326440628 0.9888230864775455 1.1746836702061956 1.0828091758733407 0.9708915213036187 1.0 12.362679779958768 STVS(ph)ETYLSKPSIAK ddPTM_A549_MK2206_60min_R1 1 STVSETYLSKPSIAK 15 1 Q7Z6B7;G5EA48;Q7Z6B7-2 Q7Z6B7 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 S(0.042)T(0.042)VS(0.877)ET(0.038)YLSKPSIAK 59.281000000000006 0.0019364 3365400.0 2671.2 2817.6 2502.3 2393.4 3030.2 2702.0 2359.0 2762.6 3496.2 4130.6 3748.7 True False 3122.033255430149 2961.00380505736 2857.1637668031062 2979.7831074438095 2584.4615940816684 2987.9238465575613 2787.5997646094056 3154.2070101076724 2704.3162822841564 3197.4945911737095 2817.7943311433096 1.1079705927875139 1.0508232529007693 1.013971720797601 1.0574877926717858 0.9171931270913704 1.0603768392653492 0.9892843256158966 1.1193886563139845 0.9597280583593516 1.1347508779593356 1.0 11.460350598840527 -2.0000000000000018 0.4343323829512682 0.9917499429623187 3.272881542104267 0.0 0.0680484683671059 67.17637823830063 0.7379998925292137 0.01058090565210069 135.89824199559467 0.009999999999999959 2.0000000000000018 2.2811315991419487 STVTGERQS(ph)GDGQESTEPVENK ddPTM_A549_MK2206_60min_R1 2 STVTGERQSGDGQESTEPVENK 22 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 STVTGERQS(1)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK 300.6 1.5016999999999995e-157 796880000.0 14952.7 14849.9 14889.6 13284.7 17660.4 13425.0 14031.8 13151.4 19260.6 19480.8 19948.1 True False 17476.350201583704 15605.69648094877 17001.16917323723 16539.45209637285 15062.578554590422 14845.624589206236 16581.19642943886 15015.651224473346 14898.104852858018 15080.0737499968 14994.436230447849 1.1655223266144583 1.0407658041360495 1.1338318368192124 1.1030392768477468 1.004544507248909 0.9900755427576907 1.1058232650167212 1.0014148577311908 0.9935755252075287 1.0057112863886843 1.0 13.872139659486862 -5.976176540750125 0.37576155711096143 0.994064681648414 1.1870704462960493 0.5093577074573802 0.043306957231358044 2.083880488267934 0.284583971388058 0.01224679892915173 0.16564664760663478 1.056388000094627e-06 5.976176540750125 0.1930057646476353 STVTGERQS(ph)GDGQESTEPVENK ddPTM_A549_PD325901_60min_R1 2 STVTGERQSGDGQESTEPVENK 22 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 STVTGERQS(1)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK 326.14 9.457299999999996e-197 964970000.0 20494.4 19952.0 20536.0 19130.5 21226.4 19463.0 21248.9 23422.4 20680.7 20923.0 22754.5 True False 22574.976400820135 21633.425061550097 21929.696452999906 20312.14753648219 19735.530891104667 19304.49978093709 22057.538517344245 22955.22185748265 19811.56209807151 19601.91820925847 19955.840752659948 1.131246569895136 1.084064827419839 1.0989111771738738 1.0178547618333118 0.9889601313076265 0.9673608854772987 1.1053174251455258 1.1503009140029798 0.9927701039321429 0.9822647139858388 1.0 14.284523441367392 -2.0000000000000004 0.2621142373623404 1.0013375661722035 1.8421577551440982 0.24409694799102144 0.0556943451388938 45.11282294983074 0.5543880980196572 0.025497745996890135 17.272242052783827 0.00999999999999999 2.0000000000000004 0.8408201889718947 SVAAEGALLPQTPPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SVAAEGALLPQTPPSPR 17 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 SVAAEGALLPQT(0.001)PPS(0.999)PR;SVAAEGALLPQT(0.1)PPS(0.9)PR 188.6 1.7663e-39 25688000.0 11196.5 11533.0 11133.2 9831.599999999999 13804.4 10013.5 9295.0 10715.6 14754.2 15801.400000000001 17216.2 True False 13086.19547185672 12119.98043857414 12712.055168673753 12240.342441357294 11773.7910465781 11073.12192357666 10983.781183571182 12234.569115148684 11412.39725761595 12231.852765451082 12940.942397052162 1.0112243042545066 0.9365608830261829 0.9823129397105926 0.9458617514707075 0.909809400686311 0.8556658073139267 0.8487620798059649 0.9454156227397795 0.8818830118752092 0.9452057191937888 1.0 13.659655061953115 -4.768700001426235 0.8908090626838786 0.9288231271898956 1.126050821063598 0.24099531500041205 0.0453061952940037 7.4311585797416635 2.396643289079703 0.00885711944239819 1.7588274849845669 1.703334718447076e-05 4.768700001426235 0.19722769387370243 SVAAEGALLPQTPPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SVAAEGALLPQTPPSPR 17 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 SVAAEGALLPQTPPS(1)PR 148.52 1.5783e-16 9679100.0 4498.5 4192.0 4725.6 4772.0 5562.6 5028.5 4560.4 5220.7 3845.2 4702.0 5072.0 True False 4955.18440837933 4545.274551825279 5046.307633341273 5066.75560200167 5171.902165928222 4987.549563193858 4733.948517546634 5116.569042940081 3683.5996160431946 4405.114917551662 4448.176154057054 1.1139811546941207 1.0218288112712586 1.1344666799534635 1.139063613157592 1.1627017426481812 1.1212572053030898 1.0642448395909265 1.1502622346179805 0.8281145998868522 0.9903193499955892 1.0 12.118998206615682 -8.75172909837615 24.999961293129836 0.9188318924577744 1.1122327387171256 0.6446726772332302 0.05696586584273858 95.3894960050308 245588.3744874403 0.011924293856594232 0.013437981969542667 1.7712134507759552e-09 8.75172909837615 0.19340084625935117 SVACS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SVACSPK 7 0 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 1 SVACS(1)PK 65.535 0.024950999999999997 11303000.0 3357.7 3248.5 3450.8 3374.2 3974.6 3080.9 3121.0 3272.1 2613.9 3559.2 4150.3 True False 3698.5712321919054 3522.2624956117397 3684.9920393461284 3582.6166706358013 3695.4378076256244 3055.8101718691387 3239.7713628767324 3206.8353985872072 2504.0468730821067 3334.4715045831294 3639.8394109193573 1.0161358276127115 0.9676972245108144 1.0124051155365028 0.984278773367888 1.0152749587081986 0.8395453279344807 0.8900863464353843 0.8810376053863374 0.6879553162620518 0.9161040167266342 1.0 11.829659085036319 -7.262323906808224 24.75791823824849 0.853881821360171 0.9973198252437518 0.439742235545709 0.07195897408513312 71.10349973580801 1990192.822071325 0.016378041562663023 0.027113520228346108 5.46608137915494e-08 7.262323906808224 0.14343800388358086 SVAET(ph)PVHK ddPTM_A549_MK2206_60min_R1 2 SVAETPVHK 9 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 S(0.003)VAET(0.997)PVHK;S(0.001)VAET(0.999)PVHK 86.014 0.0010927 49796000.0 4494.9 5315.5 5283.9 4248.7 5269.0 4299.3 4421.1 4578.0 6485.4 6749.6 6657.6 True False 5253.529230245948 5586.036245663828 6033.236473408838 5289.631690731393 4493.937079802096 4754.249072355634 5224.3566423546645 5226.945519537003 5016.467255055674 5224.860672199213 5004.33417958751 1.0497958453044354 1.1162396525094302 1.2056022353619351 1.057010083840444 0.8980089895140687 0.9500262975538356 1.0439663809152908 1.044483707914135 1.002424513438302 1.0440670995776464 1.0 12.288962417718142 -6.520795639319267 24.9829281804348 0.99715912413175 1.124480439786919 0.5229608523195255 0.05303976729320889 43.35561998813788 519966.07239988784 0.007213092888692414 0.0152031021797194 3.014424151473439e-07 6.520795639319267 0.12732131565516902 SVAET(ph)PVHK ddPTM_A549_PD325901_60min_R1 2 SVAETPVHK 9 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SVAET(1)PVHK;SVAET(1)PVHK 127.87 4.5984e-05 59814000.0 9030.2 9455.7 10737.6 9909.6 11207.099999999999 10490.3 11196.3 11953.3 10322.1 11817.599999999999 12098.099999999999 True False 9946.939256318119 10252.565023782034 11466.318106434157 10521.6934856655 10419.951958396101 10404.870474847885 11622.381323350442 11714.882054317553 9888.29803306967 11071.434719195759 10610.110396174612 0.9374963016317348 0.9663014465408872 1.0806973422791382 0.9916667303913266 0.9820776193010139 0.9806561936056081 1.09540625774646 1.1041244263152301 0.9319693823953815 1.0434796911432207 1.0 13.373152046846903 SVAGKEDNT(ph)DTDQEKKEEK ddPTM_A549_MK2206_60min_R1 1 SVAGKEDNTDTDQEKKEEK 19 3 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 S(0.003)VAGKEDNT(0.558)DT(0.439)DQEKKEEK 60.99100000000001 0.00067035 167800000.0 2207.3 2112.3 2270.6 1646.0 2704.1 1819.1 2154.9 2151.7 2941.6 3133.9 3113.8 True False 2579.83827669623 2219.807047637229 2592.6052227563173 2049.2700738917483 2306.33047209961 2011.5959545791468 2546.417436522599 2456.710064304887 2275.332296769942 2425.949813411923 2340.557523491886 1.1022323744674987 0.9484095243792561 1.1076870347063295 0.8755478356432083 0.9853765391156835 0.8594516197055647 1.0879533662234415 1.049626014164229 0.9721326111119737 1.0364837390506172 1.0 11.192636507023071 -3.711366419949123 2.147633998047825 0.9874130757393941 68.2277692412406 0.14071313711891675 0.07521218063820823 1328.0049807521323 12.351844423542174 0.009441676378575714 438415.09108277375 0.0001943719448022383 3.711366419949123 67.2403561655012 SVAGKEDNT(ph)DTDQEKKEEK ddPTM_A549_PD325901_60min_R1 1 SVAGKEDNTDTDQEKKEEK 19 3 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 SVAGKEDNT(0.527)DT(0.473)DQEKKEEK 90.193 1.264e-06 220890000.0 3296.2 3117.5 3266.7 3425.4 3763.2 3448.4 4308.7 4257.5 3523.8 3588.3 3808.2 True False 3630.8277974658126 3380.2226658672016 3488.3979062628946 3636.979178352165 3498.8858143352163 3420.317373713375 4472.669936311109 4172.580822555861 3375.7069403445907 3361.7341256168907 3339.8155421687816 1.087134229906618 1.0120986093957096 1.0444881946976112 1.0889760624296076 1.0476284603619572 1.0241036759450248 1.3391966950985215 1.2493446928048924 1.0107465210945459 1.0065628125779293 1.0 11.705552709592848 -8.951426559110725 24.998603279815033 1.0047407341703227 1.1092342793779362 0.19939003625633578 0.09444004021706659 141.8457907956354 73001.8701506818 0.017555343261682226 0.0186854304475553 1.1183389240651086e-09 8.951426559110725 0.10449354520761345 SVAGKEDNTDT(ph)DQEK ddPTM_A549_MK2206_60min_R1 1 SVAGKEDNTDTDQEK 15 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 SVAGKEDNT(0.116)DT(0.884)DQEK 105.38 2.0512e-06 4430000.0 1831.4 1672.2 1929.1 1587.0 2286.1 1615.0 1923.4 2063.5 2568.5 2538.5 2413.1 True False 2140.495546568875 1757.3078374563167 2202.675387659303 1975.8150712431375 1949.8177183783587 1785.8982280497635 2272.8568831071343 2356.0074442037144 1986.7388510516714 1965.0510869351817 1813.8606718280794 1.1800771579724478 0.968821842134784 1.2143575423791293 1.0892871221756157 1.074954514788204 0.9845840178285942 1.253049320936244 1.298891078458214 1.0953095140705371 1.0833528271797892 1.0 10.824847926976974 -9.924032510848575 1.212823471456748 1.0159308523232724 1.1256406701905948 0.08686615760796257 0.10071401117405406 0.5284325744576993 1.56685132256392 0.03043724442949692 0.018596763024023834 1.1911528361852076e-10 9.924032510848575 0.10970981786732237 SVAGKEDNTDT(ph)DQEK ddPTM_A549_PD325901_60min_R1 2 SVAGKEDNTDTDQEK 15 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 SVAGKEDNT(0.154)DT(0.846)DQEK;SVAGKEDNT(0.015)DT(0.985)DQEK 132.59 8.3636e-10 15579300.0 5792.6 6201.0 5971.4 5977.3 6691.2 5620.1 5981.6 6626.1 6546.1 6135.2 6229.799999999999 True False 6380.660487713267 6723.580032411392 6376.65511294525 6346.504245566762 6221.233195386853 5574.331768938217 6209.233061257116 6493.93723742511 6270.990181675948 5747.822424960216 5463.574093955961 1.1678546639958312 1.2306193558991545 1.1671215587612105 1.161603034282547 1.1386746273412942 1.0202720184768392 1.1364782383249885 1.1885877496580453 1.1477816670617107 1.0520260778230688 1.0 12.415629309196673 -14.999999998419534 0.19340902849707783 0.3095376384373563 1.1799023980968935 0.47775602598395583 0.05006165784476825 26.786432751383334 0.30974711482045425 6.993678417736762 0.04844457087023937 1.0000000036391564e-15 14.999999998419534 0.8703647596595372 SVAGKEDNTDT(ph)DQEKKEEK ddPTM_A549_MK2206_60min_R1 3 SVAGKEDNTDTDQEKKEEK 19 3 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 S(0.001)VAGKEDNT(0.037)DT(0.963)DQEKKEEK;SVAGKEDNT(0.166)DT(0.834)DQEKKEEK;SVAGKEDNT(0.008)DT(0.992)DQEKKEEK 98.74 1.8805e-07 191907000.0 4461.36 5227.2 5210.1 4190.5 6921.7 4963.0 4742.7 4401.700000000001 7692.2 7730.1 7829.799999999999 True False 5214.328498220222 5493.24215282362 5948.9705236865575 5217.172688118693 5903.527099120548 5488.181365827227 5604.387199496836 5025.654454640896 5949.928981919276 5983.865041212391 5885.444568513318 0.8859701994504348 0.9333606134381163 1.0107937394420634 0.8864534577439012 1.0030724154134372 0.9325007315825521 0.9522453459981396 0.8539124608407267 1.0109565917502554 1.0167226913028142 1.0 12.522935680820465 SVAGKEDNTDT(ph)DQEKKEEK ddPTM_A549_PD325901_60min_R1 4 SVAGKEDNTDTDQEKKEEK 19 3 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 SVAGKEDNT(0.197)DT(0.802)DQEKKEEK;SVAGKEDNT(0.076)DT(0.924)DQEKKEEK;SVAGKEDNT(0.001)DT(0.999)DQEKKEEK;SVAGKEDNT(0.122)DT(0.878)DQEKKEEK 160.69 5.0666000000000004e-27 125995700.0 9599.3 10869.7 11006.1 10455.2 11891.3 11677.4 11966.5 12185.5 12153.6 10612.4 11347.400000000001 True False 10573.813869368834 11785.727766215465 11753.040131055826 11100.993958518 11056.09611075796 11582.30312602963 12421.891705820057 11942.450643160173 11642.826457282485 9942.331252876487 9951.741737095228 1.0625088701764462 1.1842879445197048 1.1810033300247573 1.1154825207268917 1.110970963961639 1.1638468352586429 1.2482128288676662 1.2000362307076917 1.169928517526105 0.9990543882199371 1.0 13.280733330475597 -10.587279592173571 0.8854113339008761 1.0003885323219666 1.161582160788912 0.6218276589722149 0.04775685967846391 0.3215633614011853 0.4521620292743064 0.032807762877535604 0.009134849031512505 2.5865471993330246e-11 10.587279592173571 0.16119362846694552 SVAPLPPQRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SVAPLPPQRSPR 12 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR 79.02199999999999 0.00026166 23576000.0 5017.3 5612.5 5012.4 4931.3 7145.9 4666.799999999999 4842.299999999999 4608.4 5876.3 8259.3 7918.8 True False 5864.097578792189 5898.152277074257 5723.2336908939305 6139.468721374472 6094.747576116488 5160.637678428876 5722.083230253552 5261.654812633096 4545.327432522845 6393.518393667031 5952.343412238278 0.9851746064810959 0.990895831874787 0.9615093240633114 1.0314372502015687 1.0239240504144 0.8669925978763893 0.961316045456769 0.8839635834543592 0.7636198246185617 1.0741178643224243 1.0 12.539242047808473 -7.262357248840813 24.935289554807483 0.8901511066981694 0.9979258677026095 0.09541984618609878 0.08028181344954803 86.13590003753275 2340011.8904786813 0.013001055170222925 0.021533150343688783 5.465661748523401e-08 7.262357248840813 0.10777476100444006 SVAPLPPQRS(ph)PR ddPTM_A549_PD325901_60min_R1 3 SVAPLPPQRSPR 12 1 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR 93.478 7.3707e-05 42372000.0 6464.700000000001 5939.7 6547.9 6389.5 7012.6 6364.4 5838.0 6262.7 7159.2 7122.200000000001 7870.0 True False 7120.991584939395 6440.25936437896 6992.2798697213775 6784.164903392643 6520.0591681566575 6312.570436510091 6060.168284676181 6137.785535506896 6858.323720788629 6672.503076517745 6902.039892040419 1.0317227510016966 0.9330950653887129 1.0130743923669618 0.9829217172761184 0.9446568362602091 0.9145948929953134 0.8780256821848998 0.889271234520844 0.9936661955109526 0.9667436266505239 1.0 12.752807096871123 -8.955266046014257 24.985971933752932 0.9972057477445799 0.9472310201406691 0.11121153593080524 0.045829784644591524 157.25620439542445 87835.17766345074 0.008162826448744278 0.008685890961046607 1.1084955499623127e-09 8.955266046014257 -0.04997472760391086 SVAS(ph)SQPAKPTK ddPTM_A549_MK2206_60min_R1 2 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.001)VAS(0.953)S(0.045)QPAKPTK;SVAS(0.973)S(0.027)QPAKPTK 90.561 7.5874e-05 24670000.0 5594.4 6622.8 5778.0 5304.6 6890.200000000001 5753.0 4836.5 5088.7 7272.9 8033.799999999999 7450.3 True False 6538.597950051821 6959.87223173406 6597.407283134851 6604.227238132547 5876.660707392748 6361.7786414676675 5715.229445329965 5810.038808490161 5625.599762434768 6218.9590002835785 5600.184892180486 1.1675682278243416 1.2427932944592774 1.1780695477298941 1.179287356628886 1.049369051296557 1.1359943937477122 1.0205429919483757 1.0374726764115758 1.004538219852307 1.1104917284011613 1.0 12.45125874373028 -7.081383374307253 0.6352412614973633 1.0000514222212629 1.221211750958327 0.6372326940662885 0.04824564922718682 0.20639245990014804 0.151872856741971 0.00625292878754377 0.021697563954459275 8.291185383547238e-08 7.081383374307253 0.22116032873706404 SVAS(ph)SQPAKPTK ddPTM_A549_PD325901_60min_R1 2 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.112)VAS(0.444)S(0.444)QPAKPTK;S(0.036)VAS(0.482)S(0.482)QPAKPTK 58.831 0.0031469000000000002 92227000.0 4478.200000000001 4495.299999999999 4642.7 4282.4 5535.4 4800.3 4349.2 5356.4 4595.7 4908.5 5360.0 True False 4932.823567323404 4874.134707256722 4957.781540823076 4546.914121963945 5146.6126000933145 4761.207948334391 4514.711185973557 5249.562399985488 4402.558710977248 4598.576472310147 4700.753979839475 1.0493685882050467 1.0368835995588879 1.0546779435992477 0.9672733653930166 1.0948483205387969 1.0128604833935557 0.960422775864507 1.1167490199444037 0.9365643745362717 0.9782635917626099 1.0 12.19867646182141 -8.798033575055749 24.999977023337507 0.9700442916622687 1.0335407830709828 0.2788482906902878 0.04636008492381262 158.6635185958686 108393.17937975486 0.00795992500344993 0.008474105495525363 1.5920856390713943e-09 8.798033575055749 0.06349649140871416 SVATGPMT(ph)PQAAAPPAFPEVR ddPTM_A549_MK2206_60min_R1 2 SVATGPMTPQAAAPPAFPEVR 21 0 Q7Z2K8 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 S(0.001)VAT(0.015)GPMT(0.984)PQAAAPPAFPEVR;SVAT(0.018)GPMT(0.982)PQAAAPPAFPEVR 78.021 0.00022319999999999998 2369800.0 1244.8 1547.55 1331.3899999999999 1115.62 1711.79 1127.72 1468.03 1482.83 1892.91 1575.21 1934.4099999999999 True False 1454.8918075619383 1626.3136848795134 1520.2011219613912 1388.946950082085 1459.9879585945005 1247.0545818800495 1734.7520485118887 1693.0256934764209 1464.1689073561288 1219.3689669691432 1454.0426099999813 1.0005840252246507 1.1184773222564188 1.0454997064779352 0.9552312570001665 1.0040888406939596 0.857646518268172 1.1930544789962592 1.164357689267746 1.006964237008259 0.8386060756288007 1.0 10.505853832004144 -8.961571959238535 24.999970507705694 1.00307221702745 1.0425668293779753 0.08197735878396928 0.10241414864384608 476.3984751045995 309930.6314114597 0.01592760624747061 0.016924017017124128 1.0925165906372802e-09 8.961571959238535 0.039494612350525315 SVAVS(ph)DEEEVEEEAER ddPTM_A549_MK2206_60min_R1 4 SVAVSDEEEVEEEAER 16 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 SVAVS(1)DEEEVEEEAER;SVAVS(1)DEEEVEEEAER;SVAVS(1)DEEEVEEEAER;S(0.002)VAVS(0.998)DEEEVEEEAER 206.95 2.4950999999999996e-40 80668500.0 2301.96 2587.14 2190.24 2089.12 3618.23 2561.6099999999997 2177.58 2390.15 3581.4 3561.67 3619.76 True False 2690.474570481427 2718.814375431605 2500.848966392053 2600.9544937841597 3085.9931600403 2832.6778699408987 2573.218098947923 2728.9610820273856 2770.218618320598 2757.086273312754 2720.873691706272 0.9888274412305477 0.9992431415390784 0.9191345316819024 0.9559262165356487 1.1341919948165842 1.0410912783549735 0.9457322869457592 1.0029723505158528 1.0181356917686912 1.0133091740777476 1.0 11.409854270070507 SVAVS(ph)DEEEVEEEAER ddPTM_A549_PD325901_60min_R1 5 SVAVSDEEEVEEEAER 16 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(0.009)VAVS(0.991)DEEEVEEEAER;SVAVS(1)DEEEVEEEAER;SVAVS(1)DEEEVEEEAER;SVAVS(1)DEEEVEEEAER;SVAVS(1)DEEEVEEEAER 229.54 4.0527e-55 177054160.0 4145.18 4409.6 4365.6 4398.02 4328.37 4742.82 4006.2499999999995 4656.21 4194.6 4057.06 4070.22 True False 4565.995622079768 4781.212467492548 4661.875868485412 4669.675706771876 4024.36022326587 4704.196046396958 4158.710036054116 4563.338238823921 4018.315549114428 3800.8965392178106 3569.608743250415 1.2791305575753555 1.33942199590728 1.3059907132120032 1.3081757813378063 1.1273953289349485 1.3178464041169426 1.165032454584162 1.2783861109295231 1.1257019573118339 1.0647935985714752 1.0 11.801550237038022 -9.144340114019352 0.2992632366091218 0.9560735712415638 1.3305731068965192 0.6820165150344178 0.06312057674249343 0.5019544942735444 0.13120691456798186 0.0695312880174543 0.04514139282325636 7.172323768522691e-10 9.144340114019352 0.3744995356549554 SVDALDDLTPPS(ph)TAESGSRSPTSNGGR ddPTM_A549_MK2206_60min_R1 1 SVDALDDLTPPSTAESGSRSPTSNGGR 27 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 SVDALDDLT(0.004)PPS(0.391)T(0.153)AES(0.153)GS(0.153)RS(0.137)PT(0.004)S(0.004)NGGR 53.266000000000005 0.0018594999999999998 4187700.0 1062.7 1247.7 1141.3 944.8 1511.7 1247.2 831.13 1229.0 1813.4 1371.2 1085.4 True False 1242.0577794794924 1311.2026006424142 1303.1535015994823 1176.276042413684 1289.3309325368818 1379.1778761756427 982.1355626790232 1403.2145136546476 1402.6677954047507 1061.4449676602417 815.8652244839403 1.5223810774201485 1.6071313757389156 1.5972656542920636 1.4417528865232792 1.580323433141084 1.6904481705884877 1.2037963295962932 1.7199097002108696 1.7192395916764083 1.3010052834788222 1.0 9.67218703801578 -10.839955626777181 1.0291089692782953 0.992164672920866 1.5709804777451237 0.4580454457636485 0.16312206669705 0.24386817832377894 0.4483655599329318 0.10452063132978068 0.024282851406417547 1.4455874633840677e-11 10.839955626777181 0.5788158048242578 SVDALDDLTPPS(ph)TAESGSRSPTSNGGR ddPTM_A549_PD325901_60min_R1 1 SVDALDDLTPPSTAESGSRSPTSNGGR 27 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 SVDALDDLT(0.002)PPS(0.52)T(0.075)AES(0.061)GS(0.061)RS(0.27)PT(0.008)S(0.002)NGGR 89.634 2.5008000000000003e-09 9874900.0 2089.2 2090.6 1872.0 1919.6 2373.9 2454.3 2298.0 2567.5 2355.1 2350.1 2247.0 True False 2301.294046012248 2266.782198961337 1999.0451772504796 2038.1693322720896 2207.165453510409 2434.312994520573 2385.4516475138503 2516.2891983352133 2256.1233370808623 2201.714284929424 1970.6332449065858 1.167794185935058 1.150281111323071 1.0144176662082247 1.0342712615551684 1.1200285285022864 1.235294797148298 1.210500053056259 1.2768937116223742 1.144872260179397 1.117262327031224 1.0 10.944443585656183 -10.422513452450687 0.991157878472408 1.0079133600526022 1.1478400467361838 0.10857497658750326 0.08088588793816213 0.4820880197134128 0.910920410532642 0.04123686874269156 0.015218142368293372 3.7799542855617947e-11 10.422513452450687 0.13992668668358155 SVDETLR ddPTM_A549_MK2206_60min_R1 2 SVDETLR 7 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 ; 147.69 0.010223000000000001 65192000.0 12403.7 13541.1 11462.5 11710.9 16949.5 13420.5 12381.099999999999 11784.4 18927.6 17923.7 18621.6 False True 14497.141318650403 14230.284151285561 13088.054860320746 14580.071025722276 14456.251002866875 14840.64840219309 14630.585606445735 13454.87478821142 14640.528821166283 13874.723721449718 13997.342789985389 1.0357066720565422 1.016641827295023 0.9350385324337983 1.0416313470692316 1.0327853807516822 1.060247550185815 1.0452402163725967 0.9612449298475361 1.045950580823174 0.9912398324185215 1.0 13.772865356179592 SVDETLR ddPTM_A549_PD325901_60min_R1 2 SVDETLR 7 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 ; 125.25 0.016696000000000003 102931000.0 16110.199999999999 15568.2 16015.7 15020.8 17920.0 17381.8 16228.8 16654.5 18158.9 17775.8 17504.6 False True 17745.69564429758 16880.186850602648 17102.62171222782 15948.600701288075 16661.3610206439 17240.248383717415 16846.39586474012 16322.312932297495 17395.74458227578 16653.43295436299 15351.645170801872 1.1559474862048715 1.0995685910398705 1.1140579085788296 1.0388854434716603 1.0853143643739922 1.1230228546779846 1.0973674597938985 1.06322890808744 1.1331518145925943 1.0847979333209876 1.0 13.906105650947826 -10.899004372155217 1.0491393218802318 0.9976264659334075 1.1013106042762413 0.13962401918899048 0.03905605530386313 0.3078262646411148 0.5784515729396291 0.024437321468006704 0.005308566628629814 1.261814831509472e-11 10.899004372155217 0.10368413834283374 SVDFDS(ph)LTVR ddPTM_A549_PD325901_60min_R1 2 SVDFDSLTVR 10 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 SVDFDS(0.961)LT(0.039)VR;SVDFDS(0.987)LT(0.013)VR 97.456 0.00051503 2070600.0 1111.16 1122.46 1029.15 959.1600000000001 978.4200000000001 1406.01 1233.4099999999999 1250.5 1040.31 1148.0500000000002 1341.1399999999999 True False 1223.9641452072424 1217.0536434737119 1098.9943077816934 1018.4051347895896 909.699154565759 1394.5599207211296 1280.3480924978492 1225.5577965017283 996.589388475475 1075.5619270725613 1176.188282186923 1.0406192305635695 1.034743894243536 0.9343693730210434 0.8658521345715481 0.7734298737225365 1.185660443860384 1.088557088935845 1.0419741592927716 0.8473042994634207 0.9144470688593631 1.0 10.199903307451049 -10.128456913925655 0.004236996583099839 1.2163597042742433e-07 1.9019541477652597 0.0 0.1150394964854608 96969.66948740005 125.68145790715248 28625.57777367522 27791.774707894438 7.439488659318152e-11 10.128456913925655 1.9019540261292893 SVDIS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 SVDISPTR 8 0 Q9P2Q2 Q9P2Q2 FRMD4A FERM domain-containing protein 4A 1 SVDIS(0.984)PT(0.016)R;SVDIS(0.999)PT(0.001)R 110.88 0.0015597999999999999 18156800.0 3444.4 4120.1 4119.6 3434.5 4479.5 3578.1 3695.2 3789.1000000000004 4754.799999999999 6163.9 5950.9 True False 4025.7305125050957 4329.79549163005 4703.821225960945 4275.952654180566 3820.5714839577704 3956.732167049449 4366.570008556452 4326.216528632079 3677.845391855356 4771.47070898553 4473.127293515278 0.8999812096430216 0.9679571377069869 1.0515732992396853 0.955920181475596 0.8541164230887142 0.8845561298435547 0.9761783472799214 0.9671570346106231 0.8222089716040839 1.066696831074484 1.0 12.127068098920128 -6.533257038798054 24.713039947289516 0.9163650607941088 0.9778321372583668 0.0 0.07452882888883405 301.53302572845007 718016.575180828 0.010750104816454241 0.02239646292703441 2.929159098456201e-07 6.533257038798054 0.061467076464257975 SVDISLGDS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SVDISLGDSPR 11 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 SVDISLGDS(1)PR;SVDISLGDS(1)PR 99.73200000000001 0.00027251 13781200.0 3477.3 3945.2000000000003 3900.7 3681.7 6233.2 4847.0 3770.1 4578.6 7578.6 6459.700000000001 6346.7 True False 4064.1832281773186 4145.993828688348 4453.877914386318 4583.716665277795 5316.3045370701075 5359.906322821793 4455.078369035148 5227.630571374429 5862.059200537352 5000.449283543506 4770.639229990993 0.851915861217825 0.8690646323922875 0.9336019136359482 0.9608181302962305 1.1143799144669644 1.1235195252506889 0.9338535475556301 1.095792475463356 1.2287785594192624 1.0481717527722059 1.0 12.219966874194833 -6.395499859571579 1.3170427239154991 1.0989413659258704 0.8567433455398767 0.5586856517245737 0.07474225858341485 0.30351629981314343 0.9813432016903658 0.014632771349964331 0.05549543487569247 4.0225378606677506e-07 6.395499859571579 -0.2421980203859937 SVDISLGDS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SVDISLGDSPR 11 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 SVDISLGDS(1)PR;SVDISLGDS(1)PR 117.27 1.7725e-05 33825000.0 5518.1 5518.0 5897.9 5728.7 6061.1 6016.5 6320.7 6037.3 5617.5 6068.0 6370.5 True False 6078.293449789485 5983.021225422686 6298.166960953844 6082.548788178328 5635.389245659862 5967.503618764219 6561.237697319753 5916.88131532977 5381.416010382465 5684.865444428639 5586.968885926746 1.087941167007455 1.0708885887110582 1.1272958717952708 1.0887028212202718 1.00866665999431 1.0681111244052242 1.1743823585356157 1.0590503430642069 0.9632085161487015 1.0175223024328073 1.0 12.447850070544833 -8.640770091483772 5.070360732272514 0.9828227877999998 1.0880956626340161 0.5107993518983222 0.040458689738201076 0.10826604781488194 4.41409091865976 0.006910658937943092 0.007829876244919619 2.2868090829575937e-09 8.640770091483772 0.10527287483401637 SVDISLGDS(ph)PRR ddPTM_A549_MK2206_60min_R1 3 SVDISLGDSPRR 12 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 SVDISLGDS(1)PRR;SVDISLGDS(1)PRR;SVDISLGDS(1)PRR 133.47 2.1246e-08 42529000.0 1511.77 1658.6599999999999 1817.6499999999999 2069.84 2026.76 1717.35 1680.71 1768.38 2819.29 2510.7200000000003 2489.0 True False 1766.9198167721015 1743.078709290332 2075.4201017982127 2576.95089291865 1728.6262888327374 1899.0788371153308 1986.073251537378 2019.05328043662 2180.7253164810077 1943.5466082292303 1870.9126070946445 0.944416008568121 0.9316729721529715 1.1093089511119119 1.3773764114617935 0.923948174958923 1.015054807965844 1.0615531928140498 1.07918096910578 1.1655944314082494 1.0388227653494622 1.0 10.86952645454178 -8.21449045563345 5.252632645207433 1.0804619318207893 1.0554826815883986 0.002847854232026603 0.12379924174360525 1.4726754582594048 97.52350009289036 0.02151538762475434 0.027679997403525412 6.102524678425544e-09 8.21449045563345 -0.02497925023239067 SVDISLGDS(ph)PRR ddPTM_A549_PD325901_60min_R1 3 SVDISLGDSPRR 12 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 SVDISLGDS(1)PRR;SVDISLGDS(1)PRR;SVDISLGDS(1)PRR 175.66 2.4523e-16 124620400.0 7815.1 8492.3 7222.5 7868.5 8505.1 8609.0 7862.4 7989.099999999999 8301.7 8416.6 9251.699999999999 True False 8608.483198827456 9207.975924729439 7712.662282420722 8354.51937433993 7907.731117002136 8538.891158304852 8161.607934470368 7829.75113317229 7952.8084189394085 7885.1744396140575 8113.799551358363 1.0609681868941754 1.1348537595050516 0.9505611068650957 1.0296679529063875 0.9746027205809233 1.0523911891408906 1.0058922312301888 0.9649919354812605 0.9801583547387485 0.9718226818031227 1.0 12.986161946359177 -5.759472981466552 24.999999398007603 0.9934119630020598 1.0979109845452515 0.6164818405339145 0.03213777001783883 21.288203204588413 270627.06738553266 0.003947792628890825 0.013912951197748977 1.7399109388324654e-06 5.759472981466552 0.10449902154319168 SVDQGGGGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 SVDQGGGGSPR 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 SVDQGGGGS(1)PR;SVDQGGGGS(1)PR 81.278 0.00079977 453410000.0 1855.17 1809.91 1186.1299999999999 1144.37 1831.88 1339.5 1344.62 1402.45 1996.31 2021.6200000000001 2110.36 True False 2168.2773414481703 1902.0266882493497 1354.3410697031406 1424.7407013727207 1562.4128786767633 1481.245000911862 1588.9200489568034 1601.2515823229955 1544.1489724519995 1564.9346379239319 1586.2993690270207 1.366877768335818 1.1990338806072809 0.8537739446582804 0.8981537338986686 0.9849420034977959 0.9337739331135236 1.0016520714695802 1.0094258458320802 0.9734284729616486 0.986531715563757 1.0 10.631449349180551 -5.56447313821362 4.588446431652159 0.9735677863766032 1.3349394444684033 0.8715092430096962 0.04924902640522263 0.04486911568717712 2.077399318094533 0.007058479587190406 0.032142670478798666 2.7260063414288187e-06 5.56447313821362 0.36137165809180005 SVDQGGGGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 SVDQGGGGSPR 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 SVDQGGGGS(1)PR;SVDQGGGGS(1)PR 126.83 6.3008e-07 518830000.0 4629.5 4271.3 4746.4 4561.2 5318.8 4075.7999999999997 4547.1 5064.6 4524.799999999999 4865.1 4836.1 True False 5099.483431942226 4631.257441128651 5068.519246421832 4842.934964763208 4945.225836863879 4042.608036127184 4720.142378768593 4963.582579898162 4334.638391415855 4557.916755716839 4241.290358563744 1.2023424478934042 1.0919453868036906 1.1950417957562842 1.1418541423330428 1.165972008230654 0.9531552179549807 1.112902437636221 1.1703001115865628 1.0220093473826022 1.0746533178313962 1.0 12.05028753782062 -7.704473841061855 0.2861387508269874 0.9843032019385487 1.2000675546883361 0.2648374435317208 0.06790294177327186 1.3955277558012735 0.2664288925594162 0.04677452416104777 0.10528552818690083 1.974813825145669e-08 7.704473841061855 0.21576435274978745 SVDS(ph)LPR ddPTM_A549_MK2206_60min_R1 2 SVDSLPR 7 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SVDS(1)LPR;SVDS(1)LPR 89.698 0.012624 12830800.0 1730.5 1896.81 1639.73 1397.02 2155.35 2048.75 1792.83 1488.8 2539.9 2697.7 2423.7 True False 2022.5660933370298 1993.3495270694375 1872.268370435222 1739.289962714611 1838.3008701748804 2265.5473651498164 2118.564004232591 1699.8419592587788 1964.6167053868562 2088.2876963659805 1821.8283992829606 1.110184743048838 1.0941477956178445 1.027686455635511 0.9546947250351157 1.0090417247301684 1.2435569486355003 1.162877911589489 0.933041750764126 1.0783763751624986 1.146259272930367 1.0 10.831171360617367 -10.953224832105372 0.6063335742363054 0.9852451678375866 1.0692449272633908 0.0 0.09507726433418938 3.1889287187104984 1.4635626743701409 0.1537863058910052 0.01842503034370253 1.1137178181169604e-11 10.953224832105372 0.08399975942580418 SVDS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 SVDSLPR 7 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.002)VDS(0.998)LPR;SVDS(1)LPR 87.639 0.012884999999999999 18510800.0 4446.2 4025.2 4570.2 3947.4 4519.1 4716.5 4806.0 4255.2 4554.6 4620.0 5052.1 True False 4897.574950880556 4364.417730440626 4880.361254845162 4191.221932804149 4201.6940060486495 4678.090387750593 4988.894959944112 4170.326697860176 4363.1860010481505 4328.292411545867 4430.723727900561 1.105366809498909 0.9850349510527135 1.1014817340366323 0.9459452202834825 0.9483087333092568 1.0558298542272784 1.1259774398770814 0.9412292334092853 0.9847569537168113 0.9768815835413801 1.0 12.113326656890166 SVDSS(ph)GETTYKK ddPTM_A549_MK2206_60min_R1 1 SVDSSGETTYKK 12 1 A6PW57;Q99755-4;Q99755-3;Q99755;A6PW58;A2A5X0;Q99755-2 A6PW57 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha 1 S(0.003)VDS(0.419)S(0.566)GET(0.006)T(0.006)YKK 46.746 0.015433 3983200.0 1728.5 2145.7 1913.8 1771.5 2561.4 1824.4 2188.7 1915.5 3048.3 2892.0 2457.5 True False 2020.2285422323364 2254.906964974296 2185.2056175949256 2205.5175795256564 2184.621453066063 2017.4567970612918 2586.358459008313 2187.027990972723 2357.86491713483 2238.6951914187684 1847.234926450417 1.0936500351443321 1.2206931195845498 1.182960318855567 1.1939561925475841 1.1826440815862855 1.0921495518374413 1.4001242732986703 1.1839468600646483 1.2764293720158388 1.2119168814767745 1.0 10.851151640788688 -10.882791448576151 1.1128574316920745 0.9991336217069705 1.2092814584770122 0.0 0.10061469555814981 0.33974903056979067 0.7420263453576837 0.0554803824359395 0.013118004872203869 1.309810752818636e-11 10.882791448576151 0.21014783677004167 SVEAAAELS(ph)AK ddPTM_A549_PD325901_60min_R1 1 SVEAAAELSAK 11 0 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 1 SVEAAAELS(1)AK 107.09 0.00014509 3986400.0 2689.3 3016.1 2401.1 2439.0 2697.1 2245.9 2196.1 2756.2 2904.8 3076.7 3463.5 True False 2962.3157562419783 3270.2773320038696 2564.0530849872466 2589.651490629104 2507.6650004898806 2227.610135025771 2279.6737872520316 2701.2254288029285 2782.721357714106 2882.4366369270933 3037.511456935451 0.9752443071377457 1.0766304517261827 0.8441295189629089 0.8525569458236074 0.8255656105474799 0.7333668256425967 0.7505070580217654 0.8892889679923045 0.9161188022387238 0.948946753878317 1.0 11.568674134971547 -9.520177509444858 1.0774563623247844 0.9820602368473055 0.8666508809688769 0.15807729584675156 0.09173949812461095 0.537925681078252 1.300892778131466 0.027783643181471973 0.020313854648088853 3.0187176259418114e-10 9.520177509444858 -0.1154093558784286 SVEAAAELSAK ddPTM_A549_PD325901_60min_R1 1 SVEAAAELSAK 11 0 P20962;F5H7R9;F5GXR3 P20962 PTMS Parathymosin 0 141.95 8.387100000000001e-11 6453600.0 5414.7 5433.8 5069.1 6032.1 6847.1 5602.2 6155.5 5605.7 6194.5 7213.7 6257.4 False True 5964.396357908536 5891.725395922761 5413.119608974574 6404.689117106936 6366.183317212655 5556.57754060349 6389.7509209188465 5493.889915913425 5934.1667069540135 6758.22575090226 5487.779468926773 1.0868505907863992 1.0736082652889452 0.986395251417273 1.167082087276273 1.1600654423632786 1.01253659555131 1.1643600033673491 1.0011134643841377 1.0813420511073377 1.2315046166066044 1.0 12.422006791413635 -10.81250238349347 0.455591083924696 0.9769514433861411 1.0862928537084586 0.0 0.09205434475701625 2.437301886508402 0.6234050565910603 0.12346871066898242 0.015449262590114055 1.5399180746632613e-11 10.81250238349347 0.10934141032231748 SVEDEMDS(ph)PGEEPFYTGQGR ddPTM_A549_MK2206_60min_R1 6 SVEDEMDSPGEEPFYTGQGR 20 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(0.999)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR;S(0.002)VEDEMDS(0.996)PGEEPFY(0.001)T(0.001)GQGR 164.57 2.6364e-27 46172500.0 2160.05 3107.7 2844.36 2902.5499999999997 4133.839999999999 3495.6199999999994 3975.57 3866.22 5949.26 4654.63 4660.27 True False 2524.6136318478193 3265.8686559400744 3247.7330183207773 3613.6748803004216 3525.7576120647327 3865.5241881952397 4697.879608388391 4414.2685248021735 4601.7621090160255 3603.1458502190703 3502.996342091184 0.7207011898678434 0.9323071841949023 0.9271300056174132 1.0315953907457311 1.0064976573626567 1.1034907863727992 1.3411032012622364 1.2601407748450537 1.313664548752829 1.0285896696278307 1.0 11.774373766307725 -6.167852473530965 0.8029368786706134 1.1712663857311965 0.7551870158657652 0.6053479069690966 0.11087558527813107 0.6504049344708096 0.5922189380995493 0.022830075552709335 0.18253850383001288 6.794343920176549e-07 6.167852473530965 -0.41607936986543126 SVEDEMDS(ph)PGEEPFYTGQGR ddPTM_A549_PD325901_60min_R1 7 SVEDEMDSPGEEPFYTGQGR 20 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 S(0.001)VEDEMDS(0.998)PGEEPFYTGQGR;SVEDEMDS(0.998)PGEEPFY(0.002)TGQGR;S(0.001)VEDEMDS(0.999)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR 158.45 8.246700000000002e-27 60508700.0 6091.320000000001 5776.759999999999 5644.83 6280.32 7195.870000000001 6055.5 5793.54 7395.3099999999995 6096.04 6753.92 8233.18 True False 6709.706322207223 6263.587838740984 6027.922108920313 6668.2411027584085 6690.456915603841 6006.186015694624 6014.0163350467365 7247.804740541538 5839.844638350142 6327.476338568805 7220.551054428123 0.9292512817414931 0.8674667337058346 0.8348285419606014 0.923508614854125 0.9265853624150758 0.8318182324895037 0.8329026814869678 1.0037744606897698 0.8087810188349489 0.8763148810766146 1.0 12.81789322885952 -11.045329551899895 1.3275297179038723 1.0004005620453484 0.8763149562679262 0.0 0.0660174169970059 0.36610940352071264 1.1440978050120316 0.040827617285795814 0.008990616092458931 9.008872657315133e-12 11.045329551899895 -0.12408560577742223 SVEETLR ddPTM_A549_MK2206_60min_R1 2 SVEETLR 7 0 P30048-2;P30048 P30048-2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial 0 ; 116.88 0.019597999999999997 8536600.0 3139.5 3022.5 3040.2 2541.13 4096.4 3086.1 2689.0 2678.66 4017.6 4129.8 4010.4 False True 3669.370846594396 3176.3323398586967 3471.3460751447888 3163.7069640756613 3493.824986468268 3412.6690536126143 3177.5564930202167 3058.368258052205 3107.620014788862 3196.875311729336 3014.5069985907453 1.2172374614853418 1.053682191264974 1.1515468621461524 1.049493985435982 1.1590037734533705 1.1320819806382956 1.054088278615938 1.0145500605843558 1.0308883065262897 1.0604968949230658 1.0 11.557706363455727 -7.934538444396644 3.1762555986283103 1.01526671790502 1.122881086382053 0.5063523631736295 0.046657823446738945 0.1278684834800121 2.6316595605745245 0.006524661185156713 0.00912636979835846 1.1626836239556298e-08 7.934538444396644 0.10761436847703298 SVES(ph)TSPEPSKIMLVEPPVAK ddPTM_A549_PD325901_60min_R1 1 SVESTSPEPSKIMLVEPPVAK 21 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 S(0.041)VES(0.332)T(0.307)S(0.307)PEPS(0.012)KIMLVEPPVAK 58.626999999999995 0.00096623 1643700.0 1020.1 882.05 1239.5 1813.6 1457.9 1791.8 1397.3 1640.5 1204.9 1690.9 1473.9 True False 1123.6598010420712 956.3834490547441 1323.6199237190012 1925.6219530155547 1355.5021334819605 1777.2081748693963 1450.4750161318993 1607.7789405526473 1154.2622431526186 1584.1362854292013 1292.6196438219022 0.8692888170256599 0.7398800208752786 1.023982522658746 1.4897050050408083 1.04864732635049 1.3748887256692974 1.1221205116791082 1.2438144107101068 0.8929635633107038 1.2255239141696537 1.0 10.336082106061086 -8.776818282739415 24.76295063926788 0.949455010213313 1.117873551620572 0.0 0.21751406202780693 345.7569024160563 556732.2580234346 0.03663459985144938 0.03907301867663601 1.671789977438777e-09 8.776818282739415 0.16841854140725898 SVEST(ph)SPEPSK ddPTM_A549_MK2206_60min_R1 1 SVESTSPEPSK 11 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 SVES(0.004)T(0.83)S(0.166)PEPSK 178.49 1.1140000000000002e-15 134290000.0 9137.6 9549.7 9069.2 8169.3 12042.0 9550.8 8538.5 9283.9 11834.0 12873.0 13679.0 True False 10679.803487128835 10035.738939933366 10355.348932538354 10170.778866733819 10270.637751940938 10561.459316692064 10089.8349258658 10599.921255751333 9153.617895014782 9964.980359313213 10282.1267788058 1.0386765031085545 0.976037268925695 1.0071213043087044 0.9891707314578636 0.9988826215517451 1.0271668054572176 0.981298435909547 1.0309074653310628 0.8902455777809339 0.9691555622377357 1.0 13.327851085315471 -8.739572191708946 24.995687568832093 0.9481715073026629 1.0042486848682466 0.3650560168229874 0.030881216222051314 226.83537651060755 259288.23827095117 0.006999124991421623 0.007932983480944048 1.8214942653907952e-09 8.739572191708946 0.056077177565583725 SVEST(ph)SPEPSK ddPTM_A549_PD325901_60min_R1 1 SVESTSPEPSK 11 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 SVES(0.003)T(0.497)S(0.497)PEPS(0.003)K 162.38 1.7061e-13 180820000.0 18175.0 18227.0 18674.0 20580.0 19475.0 19311.0 20913.0 18894.0 21386.0 19755.0 20759.0 True False 20020.11262027217 19763.053257662054 19941.329935884314 21851.179859428834 18107.14318510267 19153.737618541658 21708.85565903269 18517.144347943733 20487.220791818323 18507.6659285906 18205.7746021432 1.0996572822512802 1.0855376214168624 1.0953299363344202 1.2002334609183007 0.9945824102958564 1.0520693591519508 1.1924159302992308 1.0171028013146928 1.1253144257540435 1.0165821742301402 1.0 14.152108504066941 -10.898437518955651 0.9768055350088111 0.9958486135334732 1.097260889771633 0.2381907817106611 0.06015644260714053 0.6499382244833151 1.0233271925129428 0.04895491725372967 0.00988208612128735 1.2634628625081036e-11 10.898437518955651 0.10141227623815974 SVEST(ph)SPEPSKIMLVEPPVAK ddPTM_A549_PD325901_60min_R1 1 SVESTSPEPSKIMLVEPPVAK 21 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 S(0.002)VES(0.071)T(0.463)S(0.463)PEPS(0.001)KIMLVEPPVAK 124.81 1.1672000000000001e-15 2939100.0 1053.8 1274.9 1541.5 1715.9 1498.9 2332.4 1626.8 1391.9 1687.9 1836.2 2022.1 True False 1160.7810002334415 1382.340297261939 1646.1154597925279 1821.887245908354 1393.622434924282 2313.405707704757 1688.7087642191182 1364.1374625755732 1616.963432830362 1720.2620186321485 1773.3945191480213 0.6545531677807975 0.7794883103202813 0.9282285706980524 1.0273445791315683 0.7858501985186069 1.3045070810392314 0.952246522691641 0.7692239080737294 0.9117900249331929 0.9700390973682501 1.0 10.792297806518118 -5.590683182686822 2.1976251200121495 0.9605113292162766 0.6512611565496552 0.3524700709691734 0.1329481427398744 0.3036699864731018 2.514071471910517 0.017880996388430822 0.13956026652529815 2.5663555071375537e-06 5.590683182686822 -0.30925017266662136 SVESTS(ph)PEPSK ddPTM_A549_MK2206_60min_R1 1 SVESTSPEPSK 11 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 SVES(0.012)T(0.251)S(0.736)PEPSK 160.56 2.1694e-13 116590000.0 10409.0 12558.0 11300.0 10670.0 13722.0 11849.0 10817.0 10488.0 15297.0 16708.0 17097.0 True False 12165.784724383211 13197.148560445165 12902.509916826566 13284.150478994497 11703.51197742349 13102.85331527036 12782.30888248408 11974.70611815293 11832.25392428943 12933.651195790047 12851.343046804794 0.9466547332893716 1.026908122550378 1.0039814414598864 1.033677992301148 0.9106839600187401 1.0195707380582373 0.9946282529328421 0.9317863568454178 0.9207017415375324 1.00640463402817 1.0 13.649631517623492 -8.2246314550989 23.439702648180358 0.9591997569445605 0.9924283953559465 0.0790059802265839 0.04119723471197084 464.97341979199257 296100.24564981234 0.006918465433890026 0.008931510723532083 5.961678405336335e-09 8.2246314550989 0.03322863841138601 SVESTS(ph)PEPSK ddPTM_A549_PD325901_60min_R1 1 SVESTSPEPSK 11 0 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 SVES(0.001)T(0.129)S(0.87)PEPSK 173.37 3.2923000000000003e-15 161570000.0 17619.0 16736.0 16716.0 19491.0 19780.0 18573.0 18287.0 19270.0 22374.0 18444.0 20110.0 True False 19407.667909577736 18146.401454997114 17850.448281473833 20694.91480272727 18390.72103729555 18421.74764585852 18982.921792030364 18885.644732977442 21433.698587680854 17279.44269232727 17636.597487793235 1.1004201872277408 1.028906027228706 1.0121253996882682 1.1734074453448733 1.0427590157355615 1.0445182331007274 1.0763369638145315 1.0708213274158298 1.2152966921491346 0.9797492234138041 1.0 14.106284637668988 -8.561723155284866 24.996794281840106 1.1038463365292848 1.067295946293004 0.0 0.07178402122092509 472.3559608470595 303963.9981203448 0.014251253946214628 0.016159409769889332 2.743322368868239e-09 8.561723155284866 -0.036550390236280705 SVESTS(ph)PEPSKIMLVEPPVAK ddPTM_A549_MK2206_60min_R1 1 SVESTSPEPSKIMLVEPPVAK 21 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 S(0.007)VES(0.057)T(0.171)S(0.614)PEPS(0.151)KIMLVEPPVAK 52.019 0.0023995 1687400.0 1186.1 1022.4 1687.7 1081.4 1692.7 1090.1 1071.6 1168.0 2156.6 1523.4 1581.1 True False 1386.284682639151 1074.4357929765201 1927.0412377547077 1346.3430485458907 1443.7060723061313 1205.453658450183 1266.295848984926 1333.5675768499827 1668.1335433825327 1179.2628819527506 1188.4692338599205 1.166445578180231 0.9040501532269022 1.6214481476277234 1.1328379483356303 1.214760997739294 1.0142910090613793 1.0654847537552483 1.1220884301050105 1.4035984238016448 0.9922536051881887 1.0 10.214888841091588 -11.218515870801246 1.6817873164895372 1.0000608381655351 1.2128788147649312 0.11388365775926412 0.1851467373356298 0.6049704298695133 3.0849901106346165 0.13945294281246393 0.028928886946675433 6.046222557037005e-12 11.218515870801246 0.21281797659939605 SVESTS(ph)PEPSKIMLVEPPVAK ddPTM_A549_PD325901_60min_R1 1 SVESTSPEPSKIMLVEPPVAK 21 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 S(0.01)VES(0.093)T(0.133)S(0.73)PEPS(0.033)KIMLVEPPVAK 65.47 0.00031011 5805200.0 1640.3 1841.0 2225.6 2410.0 2359.8 2397.0 2374.2 2781.6 2317.1 2393.2 2032.1 True False 1806.8220484749615 1996.1475309900611 2376.642599620015 2558.8602264928822 2194.0557888680487 2377.4796267228166 2464.5514802120897 2726.118805877015 2219.7203449323015 2242.092943573932 1782.164582543244 1.0138356839616518 1.1200691285994764 1.3335707728118011 1.4358158901582772 1.2311185007037981 1.3340404416128764 1.382897799873816 1.5296672555273754 1.2455192784521854 1.2580728881809253 1.0 10.799414860273178 -10.120463791092787 0.9610779767842121 1.0238360319409463 1.297297416212975 0.07292410046207365 0.15317788355528117 0.3989850173167244 0.7363178482100807 0.058725661627797646 0.02766604387370823 7.57767908442007e-11 10.120463791092787 0.2734613842720286 SVETLK ddPTM_A549_PD325901_60min_R1 1 SVETLK 6 0 P14618;P14618-2;H3BTN5;H3BQ34;H3BT25;H3BUW1;H3BTJ2;H3BU13 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 125.86 0.03946 49068000.0 4736.2 4584.7 4736.9 4547.7 5564.8 5067.5 4661.9 5068.1 5215.3 4837.2 5015.0 False True 5217.015537393842 4971.068759006048 5058.374519293696 4828.601100423931 5173.947645517809 5026.231960124272 4839.311155589566 4967.012769652461 4996.1190776942885 4531.778366478285 4398.186792704283 1.1861741629636633 1.1302541236429662 1.1501045220918158 1.0978617616772484 1.1763819704293503 1.1427963833782118 1.1002968686134522 1.129331927850756 1.1359497250052808 1.0303742383101153 1.0 12.102693161975818 -11.115565075382158 0.41486685192253364 0.9368641910945325 1.1452189335521468 0.7662047259682023 0.026319744492658937 0.848772483486168 0.14899055390301638 0.07911356260904925 0.006733707210305991 7.66363698392282e-12 11.115565075382158 0.20835474245761432 SVFALTNGIYPHK ddPTM_A549_MK2206_60min_R1 2 SVFALTNGIYPHK 13 0 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 ; 64.65 0.006302899999999999 2003870.0 1137.5 1736.69 1597.9499999999998 1208.94 2115.06 1937.54 1459.06 1441.0900000000001 2266.4 2246.8999999999996 1805.09 False True 1329.4821907950723 1825.0801029972538 1824.5633381940704 1505.130354271379 1803.93747580304 2142.569196765038 1724.1523156214496 1645.3689206530328 1753.0640186971023 1739.323729460177 1356.8363350504108 0.9798397614003149 1.3450996674034723 1.3447188073175251 1.1092939622784046 1.3295173700784022 1.5790918487493446 1.270715023678513 1.212650986820678 1.2920231964689908 1.281896485618183 1.0 10.406030994474733 -10.629703484180633 0.7242447657529949 0.9829280169996193 1.2845522247885217 0.0 0.16486294609781174 0.7190648440733802 0.6131907422359778 0.12820189775588078 0.027857099981907267 2.3458298908620614e-11 10.629703484180633 0.3016242077889024 SVFALTNGIYPHK ddPTM_A549_PD325901_60min_R1 2 SVFALTNGIYPHK 13 0 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 ; 90.73100000000001 0.00019773 4054900.0 1937.9099999999999 1728.6999999999998 2062.93 2246.9900000000002 2111.88 2181.4 1965.29 2087.8900000000003 2369.84 2370.33 2347.9300000000003 False True 2134.6451965860592 1874.3836158731783 2202.9328352058383 2385.7814690154514 1963.5488343904806 2163.635401640865 2040.080186397953 2046.2453960319804 2270.2438661405918 2220.6669592769513 2059.1494947545684 1.0366635360976981 0.9102707795854266 1.0698265671421818 1.158624701651307 0.9535727441802458 1.050742263809627 0.990739230733275 0.9937332870899079 1.102515320972936 1.0784389209884124 1.0 11.00783285844567 SVFDEELTNT(ph)SKK ddPTM_A549_PD325901_60min_R1 2 SVFDEELTNTSKK 13 1 Q96GQ7;B7Z6D5 Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 1 SVFDEELTNT(0.985)S(0.015)KK;SVFDEELT(0.175)NT(0.781)S(0.044)KK 105.31 6.437399999999999e-05 9623300.0 4796.7 5184.5 6055.2 5377.5 6228.799999999999 7250.799999999999 5533.200000000001 6660.5 7072.6 6511.4 6450.4 True False 5283.6574528560905 5621.416010004332 6466.142284875588 5709.655961811399 5791.310576193452 7191.751888795081 5743.768953883222 6527.651102438829 6775.363217629017 6100.269092757521 5657.04169245458 0.9339965551082091 0.993702418262576 1.1430253896661562 1.0093006684796042 1.0237348230821706 1.2712920073379543 1.0153308506713534 1.1538983548849353 1.1976866330446292 1.0783496789309726 1.0 12.465832088360022 -5.5957358832362605 4.558002898634059 1.0978955275288893 0.9460091144893087 0.2931620643619801 0.0829446029311305 0.2013371582374432 7.724463748255333 0.012809158924211392 0.05608943953669548 2.5366708412297274e-06 5.5957358832362605 -0.15188641303958061 SVFEAFGK ddPTM_A549_PD325901_60min_R1 1 SVFEAFGK 8 0 Q9UHX1-5;Q9UHX1-6;Q9UHX1;E9PQ56;A0A0J9YXX5;A0A0J9YVP6;A0A0J9YXJ8;A0A0J9YYL3;A0A0J9YWM1;A0A0J9YVR6;H0YEM1;Q9UHX1-4;Q9UHX1-3;Q9UHX1-2;H0YCP8 Q9UHX1-5 PUF60 Poly(U)-binding-splicing factor PUF60 0 112.94 0.0001356 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SVFGT(ph)PTLETANK ddPTM_A549_MK2206_60min_R1 1 SVFGTPTLETANK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 SVFGT(0.999)PT(0.001)LETANK 177.42 4.0773e-22 11334000.0 4055.7 5210.2 5495.2 4165.1 6243.7 4803.0 4681.6 5486.4 6760.5 7059.4 6592.2 True False 4740.203007655008 5475.376925436491 6274.501990703123 5185.5496869784465 5325.260000979373 5311.250272026631 5532.186120388047 6264.114001395327 5229.257544300109 5464.676637033767 4955.1748045356835 0.9566167077125306 1.104981588222608 1.266252400411748 1.04649177708764 1.0746866076459975 1.071859315066951 1.116446207977204 1.26415600831307 1.0553124260144255 1.102822171284798 1.0 12.27472023716738 -8.983339632293504 17.407122617168863 1.0243985804090179 1.1157701656841261 0.06902943677698703 0.08804492956310858 4.596240688587012 4803.289601042499 0.014998652501028263 0.015263631882978078 1.039107232627014e-09 8.983339632293504 0.09137158527510825 SVFGT(ph)PTLETANK ddPTM_A549_PD325901_60min_R1 2 SVFGTPTLETANK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 SVFGT(0.887)PT(0.113)LETANK;SVFGT(0.991)PT(0.009)LETANK 230.36 2.0297e-46 38514000.0 10315.5 10192.7 10970.8 10690.8 12544.5 10099.900000000001 11469.4 10759.0 10314.1 10410.0 11123.9 True False 11362.721966130268 11051.674600283759 11715.344460779672 11351.14643543157 11663.417596175635 10017.649763011173 11905.874293296501 10544.403304727779 9880.63424524892 9752.71082341829 9755.730820211995 1.1647227845390011 1.13283923100736 1.2008679489708485 1.1635362480393763 1.1955452452635615 1.0268477008669132 1.220397990956231 1.0808419685875104 1.012803082346035 0.9996904386919484 1.0 13.252034236553584 -8.572972546897454 3.2942512582368986 1.0059305335545168 1.1553917452668954 0.661454185767062 0.048240074681515026 0.09832171211566286 2.194772467689847 0.007701588823555415 0.00887602408560608 2.673175383037873e-09 8.572972546897454 0.14946121171237858 SVFGTPT(ph)LETANK ddPTM_A549_MK2206_60min_R1 1 SVFGTPTLETANK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.009)VFGT(0.459)PT(0.531)LET(0.001)ANK 126.95 3.3805e-07 13256000.0 2087.1 2783.0 2690.6 2469.6 3375.1 2779.6 2298.6 2607.8 3800.7 4066.9 3538.9 True False 2439.3514553040814 2924.6428128459065 3072.167538248986 3074.652110864555 2878.6272609679336 3073.7354270508486 2716.2258664396695 2977.463636052555 2939.8475184707377 3148.1844654152806 2660.0934613287436 0.9170171991196131 1.0994511491280528 1.1549096236319485 1.1558436406699542 1.0821526772709822 1.1554990348028924 1.021101666511705 1.1193079037776672 1.1051670030429135 1.1834864117303348 1.0 11.377261219797107 -10.715651502896149 0.8218773961428679 0.9957053658945227 1.0952718928558083 0.0 0.08603420664233728 0.8531994845052957 0.9536976614041144 0.054633385275220964 0.012012740284785375 1.924635522104994e-11 10.715651502896149 0.09956652696128554 SVFWAS(ph)SPYRR ddPTM_A549_MK2206_60min_R1 1 SVFWASSPYRR 11 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.819)S(0.18)PY(0.001)RR 61.11 0.0033299999999999996 5880200.0 1634.4 1550.7 1273.2 1289.4 2512.9 2212.0 2188.2 2040.9 2976.9 2076.4 2208.6 True False 1910.2467627564522 1629.6240064247754 1453.7589049649177 1605.3030578833648 2143.255738818502 2446.0723717932365 2585.7676154804153 2330.203824994117 2302.6369031324584 1607.3397978775697 1660.1436657409542 1.1506514780477581 0.9816162540953602 0.8756825899860161 0.9669663481605292 1.2910061840111442 1.4734100561721608 1.5575565349197278 1.4036157671656098 1.3870106248333316 0.9681931937861431 1.0 10.697092379778601 -6.759876889641901 24.999438761983907 1.26110653151926 0.9844320191261754 0.38218003755728436 0.18184741367897075 43.84737253815002 701523.1212542233 0.0310246693735452 0.06198476498114254 1.7382935165851726e-07 6.759876889641901 -0.2766745123930846 SVFWAS(ph)SPYRR ddPTM_A549_PD325901_60min_R1 1 SVFWASSPYRR 11 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.891)S(0.109)PYRR 76.24 0.00052203 10507000.0 1541.0 2185.9 2532.6 2254.7 2410.9 2565.8 2324.0 2291.0 3409.5 2275.9 2221.0 True False 1697.4411855757592 2370.1134644167187 2704.477465760984 2393.967698204771 2241.5667011534783 2544.9049754882794 2412.441091741597 2245.3042077452683 3266.2105718556336 2132.1992855924773 1947.8310800790057 0.8714519461856567 1.2167962040736022 1.3884558540113696 1.229042765919758 1.15080138317875 1.3065326873134482 1.238526849896936 1.1527201874477724 1.676844879034969 1.0946530771580016 1.0 10.927652854023256 -5.286205373292211 3.4419335619107914 1.2945817593823845 0.8293006733014108 0.2470633179954702 0.17336906685561682 0.33437566642031136 6.776682834179743 0.032358687859695506 0.39029942418946695 5.1736211899002245e-06 5.286205373292211 -0.46528108608097374 SVFWASS(ph)PYR ddPTM_A549_MK2206_60min_R1 2 SVFWASSPYR 10 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.122)S(0.878)PYR;SVFWAS(0.291)S(0.709)PYR 82.417 0.0010485999999999998 8817300.0 3715.8 4101.2 3884.9 3713.8 5208.6 4142.6 4445.7 3899.1 6048.0 5166.8 5655.799999999999 True False 4342.936197412155 4309.933562358476 4435.837236803493 4623.6811667188185 4442.421839790698 4580.967182364674 5253.4261439271 4451.809365492948 4678.137656671403 3999.6162915015543 4251.308767860944 1.0215527581162527 1.0137898227813336 1.0434050968815882 1.0875900620705174 1.0449539382729693 1.0775428068165462 1.235719734977136 1.0471620878605077 1.100399409244796 0.9407964723093898 1.0 12.053691328792038 -5.9682186730770255 4.233972228327673 1.0659606994673452 1.0185187591644946 0.07204189358393676 0.06840431398956133 0.43135549830189596 17.566916850035113 0.009026916356163088 0.029252805955670595 1.0759233354381382e-06 5.9682186730770255 -0.04744194030285054 SVFWASS(ph)PYR ddPTM_A549_PD325901_60min_R1 2 SVFWASSPYR 10 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.004)S(0.996)PYR;SVFWAS(0.204)S(0.796)PYR 136.49 5.2473e-07 11852500.0 5986.299999999999 6723.5 5530.4 5893.0 5963.6 6247.2 5953.9 6146.0 7556.1 6957.700000000001 7670.5 True False 6594.024769118861 7290.1129411253 5905.7262009968235 6256.997226025954 5544.737309303117 6196.324874452562 6180.478922599094 6023.413208556271 7238.543394045559 6518.38963459149 6727.077127305719 0.9802213716791222 1.0836969464099313 0.8779037447073456 0.9301212261456503 0.824241673519188 0.9211021008368117 0.9187465530181094 0.8953982680095605 1.0760309800319903 0.968977984232238 1.0 12.715764083717872 -8.759113960437768 24.999993265994977 1.0359035199662603 0.9283369266463815 0.23325248532342557 0.06661888621436529 51.057986281284386 548910.7984550982 0.011699769309239967 0.012960455376841836 1.741349876949862e-09 8.759113960437768 -0.10756659331987883 SVFWASS(ph)PYRR ddPTM_A549_MK2206_60min_R1 1 SVFWASSPYRR 11 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.129)S(0.869)PY(0.002)RR 56.951 0.0059299 6959400.0 1384.1 1217.0 1332.1 943.09 2500.9 1986.8 1646.2 1783.8 2395.0 1840.4 1778.9 True False 1617.7022420039189 1278.940101772717 1521.0118106375808 1174.1470923369193 2133.0209229221973 2197.041857268897 1945.2932312420533 2036.6591126583892 1852.5363240291044 1424.6523617866887 1337.150034857639 1.2098135585631191 0.956467164067255 1.137502726685055 0.8780967443656583 1.5951993922277328 1.6430780391093562 1.4548055046411907 1.5231343226754837 1.3854363951210131 1.065439423137259 1.0 10.384945636705908 -6.740069206319838 24.999663588508685 1.2924524645318611 1.0456865325674205 0.31183776809585906 0.21559446007503302 348.8662361219762 408115.1774362636 0.037510443813854266 0.07802737110269715 1.8194109061207433e-07 6.740069206319838 -0.24676593196444063 SVFWASS(ph)PYRR ddPTM_A549_PD325901_60min_R1 1 SVFWASSPYRR 11 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.305)S(0.695)PYRR 76.07300000000001 0.00052826 11374000.0 3015.5 2625.5 2362.6 2694.1 2699.3 3478.5 3148.5 2883.3 4350.9 2566.9 2755.1 True False 3321.631340106231 2846.7600991930517 2522.9402434679405 2860.508438254967 2509.710480079467 3450.1722492930007 3268.317890425308 2825.7903195949066 4168.046803662317 2404.8254959301044 2416.24016601786 1.3747107538488288 1.1781776245714515 1.0441595495972282 1.183867596642636 1.0386841984402788 1.4279094842542646 1.3526461220168087 1.1694989427528701 1.725013457801905 0.9952758545080527 1.0 11.238548145410595 -7.268269102359188 24.420247286438368 1.3421364772848596 1.1591668852195562 0.022146579913891906 0.21243375689335287 756.4881668680862 2704887.8487193845 0.04005175012510158 0.06492019177920402 5.391764285142071e-08 7.268269102359188 -0.1829695920653034 SVGAS(ph)HELPEHY(ph)LLIR ddPTM_A549_MK2206_60min_R1 2 SVGASHELPEHYLLIR 16 0 X6R3I0 X6R3I0 FTO 2 S(0.032)VGAS(0.968)HELPEHY(1)LLIR;S(0.001)VGAS(0.999)HELPEHY(1)LLIR 65.895 0.009711299999999999 85953000.0 5094.790000000001 5453.4 4910.42 5090.18 7620.0 5381.5 4579.54 4565.57 7607.5 7847.9 6658.5 True False 5954.665996343585 5730.9547666453 5606.791393432163 6337.274328506865 6499.108094152965 5950.966758049411 5411.583139474082 5212.753528971721 5884.413396681174 6075.0539393967365 5005.010684748773 1.1897409159362224 1.145043462965747 1.120235649149987 1.266185973951615 1.2985203236342717 1.1890018089637944 1.0812330842697724 1.0415069731731004 1.1757044624524198 1.2137943996620406 1.0 12.289157433606995 -7.738568660096658 5.572498239603475 1.0810370602659494 1.20332201929205 0.29644698209344444 0.07279035462972472 0.15340898601466965 13.71378619443599 0.012288440367533402 0.01796939346646443 1.825708089631758e-08 7.738568660096658 0.12228495902610059 SVGAS(ph)HELPEHY(ph)LLIR ddPTM_A549_PD325901_60min_R1 3 SVGASHELPEHYLLIR 16 0 X6R3I0 X6R3I0 FTO 2 S(0.003)VGAS(0.997)HELPEHY(1)LLIR;S(0.008)VGAS(0.992)HELPEHY(1)LLIR;S(0.001)VGAS(0.999)HELPEHY(1)LLIR 68.171 0.0074018 362973000.0 5629.5 6114.0 5907.8 6648.6 7096.1 6302.9 5815.0 6608.7 6991.299999999999 6415.2 6801.9 True False 6201.00269578114 6629.248237084867 6308.738834487384 7059.268921933844 6597.694416216023 6251.571272119836 6036.2930070901 6476.8842940751465 6697.479973900652 6010.143177175115 5965.30942079666 1.0395106537412444 1.1112999795071048 1.0575710980713655 1.183386883054775 1.1060104264189046 1.0479877624327736 1.0118993972124855 1.0857583131387956 1.122738067961982 1.0075157469991671 1.0 12.542381257162859 -7.256809371668107 23.68469945404017 1.0571641528624853 1.1025330635753736 0.21549618260001424 0.048244705142902564 317.3514645756208 1623398.0273532488 0.008329003258516548 0.014109948011917383 5.535930488950745e-08 7.256809371668107 0.04536891071288829 SVGDES(ph)WEQTQEGDVGALYHEQLALK ddPTM_A549_PD325901_60min_R1 2 SVGDESWEQTQEGDVGALYHEQLALK 26 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 S(0.001)VGDES(0.816)WEQT(0.183)QEGDVGALYHEQLALK;S(0.001)VGDES(0.746)WEQT(0.254)QEGDVGALYHEQLALK 168.5 2.1937000000000002e-48 26007000.0 8344.3 8309.2 9208.3 8947.400000000001 10585.3 8371.5 7510.2 9006.8 9656.3 9616.3 10539.8 True False 9191.407193251007 9009.445445139934 9833.230612006193 9500.06057698025 9841.825045302556 8303.325279561985 7796.004770739133 8827.152308302087 9250.479291687798 9009.125176871972 9243.471417297022 0.9943674598323972 0.9746820256598444 1.0638027823189429 1.0277589606868995 1.0647325664777687 0.8982907940867572 0.8434065968063373 0.954960740375538 1.0007581431341543 0.9746473776089658 1.0 13.174219047123643 -4.888609661180906 11.543105234870623 0.9896750458970351 1.084691937859049 0.0 0.06339602976016297 7964186.490263037 16932547.339457504 0.009014518499120923 18730563.305723593 1.2923803281418482e-05 4.888609661180906 0.0950168919620138 SVGGDS(ph)DTEDMR ddPTM_A549_MK2206_60min_R1 5 SVGGDSDTEDMR 12 0 Q9UK61-2;Q9UK61-3;Q9UK61;A0A087X0F1;Q9UK61-4 Q9UK61-2 FAM208A Protein FAM208A 1 S(0.26)VGGDS(0.646)DT(0.094)EDMR;S(0.138)VGGDS(0.608)DT(0.253)EDMR;SVGGDS(0.614)DT(0.386)EDMR;SVGGDS(0.982)DT(0.018)EDMR;SVGGDS(0.966)DT(0.034)EDMR 148.96 4.5145e-12 38419400.0 3804.92 4117.58 3406.74 3492.89 4618.39 3594.92 3693.7 3867.8199999999997 5715.19 6300.799999999999 5701.32 True False 4447.097474637349 4327.147234393839 3889.8669587654617 4348.6482068017895 3939.0309489442375 3975.332048285234 4364.797477972769 4416.0953297019705 4420.708590283046 4877.44490390435 4285.524895572858 1.0377019345358143 1.0097123082551636 0.9076757348402924 1.0147294235285251 0.9191478395128296 0.9276184703516558 1.0184977533281403 1.0304677810328433 1.0315442560723047 1.1381207723102886 1.0 12.065256202620118 -7.799984050363728 24.861795716026013 1.0169354990596766 0.9682282833759922 0.26481341590149676 0.05377240705596271 157.715603947744 101727.9380724659 0.006172322664919456 0.00852837263189105 1.5849513993580238e-08 7.799984050363728 -0.04870721568368441 SVGGDS(ph)DTEDMR ddPTM_A549_PD325901_60min_R1 4 SVGGDSDTEDMR 12 0 Q9UK61-2;Q9UK61-3;Q9UK61;A0A087X0F1;Q9UK61-4 Q9UK61-2 FAM208A Protein FAM208A 1 S(0.196)VGGDS(0.781)DT(0.023)EDMR;SVGGDS(0.734)DT(0.266)EDMR;SVGGDS(0.941)DT(0.059)EDMR;S(0.001)VGGDS(0.842)DT(0.157)EDMR 214.78 1.1103e-31 70552000.0 6386.2 7177.509999999999 7276.71 6867.5 7645.400000000001 7813.759999999999 7876.410000000001 7193.48 6976.22 7117.83 8440.599999999999 True False 7034.522322728041 7782.383957173532 7770.55129901193 7291.6898777758715 7108.413479198146 7750.127329203867 8176.151092686935 7050.000398224108 6683.033733858544 6668.408999063536 7402.459709371836 0.9502952530524456 1.051324054803121 1.04972557826611 0.9850360777437633 0.9602772265276345 1.0469664994450247 1.1045181485196836 0.9523861898631479 0.9028125780134315 0.9008369191960667 1.0 12.853789017684283 -8.416740954411454 24.323893697894416 0.9526857909609524 1.0212385804204303 0.38018659738434335 0.04934887592925774 25.381206083869458 5803.319537985674 0.008816539245093668 0.010658674084882889 3.830531566328236e-09 8.416740954411454 0.06855278945947785 SVGGDSDT(ph)EDMR ddPTM_A549_MK2206_60min_R1 1 SVGGDSDTEDMR 12 0 Q9UK61-2;Q9UK61-3;Q9UK61;A0A087X0F1;Q9UK61-4 Q9UK61-2 FAM208A Protein FAM208A 1 SVGGDS(0.422)DT(0.578)EDMR 98.182 0.00011892 17241000.0 941.62 875.25 999.73 729.3 1100.2 675.46 729.43 968.14 1214.7 1395.0 1369.1 True False 1100.54243560128 919.796486504988 1141.506746827346 907.978532739521 938.3620374261269 746.9367288659396 861.9579891051458 1105.3768098044018 939.5723894773076 1079.8685311304237 1029.114684762266 1.0694069882556523 0.8937745230187524 1.109212378104432 0.8822909109972243 0.9118148359168504 0.7258051409872633 0.8375723346171716 1.0741045931724829 0.9129909458967215 1.0493179692406023 1.0 10.00718805009928 -2.000013479804647 0.9647639945510994 0.9389458282866239 91.4094712765413 0.09845814153388122 0.10743285506881174 2585.8429772133154 3.989909124286142 0.015611431994575589 516672.1213772735 0.00999968962084449 2.000013479804647 90.47052544825468 SVGGDSDT(ph)EDMR ddPTM_A549_PD325901_60min_R1 2 SVGGDSDTEDMR 12 0 Q9UK61-2;Q9UK61-3;Q9UK61;A0A087X0F1;Q9UK61-4 Q9UK61-2 FAM208A Protein FAM208A 1 S(0.003)VGGDS(0.107)DT(0.89)EDMR;S(0.016)VGGDS(0.218)DT(0.766)EDMR 54.471000000000004 0.009694 7848800.0 568.1800000000001 833.63 414.98 537.22 564.4200000000001 645.16 698.08 763.27 701.89 809.04 684.81 True False 625.8612153279915 903.8829257247396 443.14303827745937 570.4028592848571 524.7770863432941 639.9060308621165 724.6458164040337 748.0459810762684 672.3920041882237 757.9570763283693 600.5827113682592 1.0420899627665645 1.505009898912168 0.737855136169142 0.9497490495278397 0.873779874794825 1.0654752771758451 1.2065712227265608 1.2455336574242297 1.1195660338879339 1.2620361225543386 1.0 9.230219135228776 -7.510997408213242 24.065408431553138 1.0875235501674205 1.0228660603088877 0.0497008422263846 0.19538249835183083 1393.6126485037787 2822734.018701863 0.029142344869686577 0.04512361508345281 3.0832063501827645e-08 7.510997408213242 -0.06465748985853281 SVGGS(ph)GGGSFGDNLVTR ddPTM_A549_MK2206_60min_R1 1 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.069)VGGS(0.931)GGGSFGDNLVTR 373.65 5.445099999999998e-273 68467000.0 9433.5 11678.0 10460.0 8315.8 15260.0 10958.0 10787.0 10330.0 15592.0 13832.0 15160.0 True False 11025.644173068398 12272.36031922907 11943.385285841221 10353.17137331045 13015.27421479976 12117.5682866683 12746.858270810373 11794.309134298215 12060.436895307626 10707.341593258789 11395.353605285183 0.967556124625627 1.0769617814700485 1.0480925559257643 0.9085432301555463 1.1421562389045352 1.0633779965413406 1.1186013802062589 1.0350103685091436 1.0583644275605433 0.9396234609422481 1.0 13.4761580726192 -5.238980014822748 22.037128405091387 1.0397589369145772 0.9675557292330107 0.08838898886526192 0.06599370742739505 1916.976315738294 1880785.0553145208 0.007854894063444117 0.44460550639869684 5.767930053947524e-06 5.238980014822748 -0.07220320768156652 SVGGS(ph)GGGSFGDNLVTR ddPTM_A549_PD325901_60min_R1 1 SVGGSGGGSFGDNLVTR 17 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.001)VGGS(0.999)GGGSFGDNLVTR 414.29 0.0 97676000.0 14063.0 12886.0 13857.0 15042.0 16972.0 13684.0 15116.0 14857.0 15358.0 16183.0 15479.0 True False 15490.665407366581 13971.948443420937 14797.419348910198 15971.110177139382 15779.945270221428 13572.56204091574 15691.247651792579 14560.665479908977 14712.556668883648 15161.202618191948 13575.181129465527 1.1411019315052386 1.0292274047890388 1.090034763277799 1.1764933391918717 1.1624113976623385 0.9998070678744682 1.1558775902985219 1.072594563641174 1.0837834522111383 1.1168324366062337 1.0 13.728683827143605 -10.360837786912683 0.4494134188932615 0.9834163801728304 1.1074212662659921 0.0 0.06254589840387537 1.2850379374951646 0.4092787841898341 0.0702393753919306 0.014757763609568894 4.356745718629656e-11 10.360837786912683 0.12400488609316174 SVGKVEPSSQS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 SVGKVEPSSQSPGR 14 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 SVGKVEPS(0.014)S(0.095)QS(0.89)PGR 51.606 0.00655 8226000.0 1486.4 1813.6 1532.1 1578.0 2153.2 1523.6 1800.4 1015.0 2679.7 2445.1 2166.7 True False 1737.2679810090513 1905.904493488083 1749.3748180150417 1964.6100708391114 1836.467132326793 1684.8263407161724 2127.509375244924 1158.8793583071333 2072.752228601583 1892.7502118042985 1628.648592122124 1.0666929559957417 1.1702367857050706 1.0741266265030271 1.2062823621633632 1.1276018296456956 1.0344934744461043 1.306303511718747 0.7115588739723878 1.2726822953874863 1.1621599778857457 1.0 10.669459636780358 -7.025546729750737 23.950362230538236 1.104906136718566 1.1331415127597524 0.010768354515543477 0.15293993613159337 3215.556880449629 3014624.0470337505 0.023243345084941015 0.040378897677116304 9.428731535786985e-08 7.025546729750737 0.028235376041186422 SVGKVEPSSQS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 SVGKVEPSSQSPGR 14 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 SVGKVEPS(0.005)S(0.011)QS(0.984)PGR;SVGKVEPS(0.008)S(0.019)QS(0.973)PGR 76.831 0.00021225 58795000.0 8091.9 9826.7 7761.2 8922.0 9483.5 11087.3 9947.0 10769.0 9892.0 9418.4 12333.3 True False 8913.383731058062 10654.83049580665 8287.921703886977 9473.091676667838 8817.411676298907 10997.008704782605 10325.538528207251 10554.203846882938 9476.273640356621 8823.720616645802 10816.382287230257 0.8240633045654404 0.985064156652975 0.7662378680597891 0.8758096214712845 0.8151904622221683 1.016699337426858 0.9546203392235413 0.9757609861240902 0.876103801503414 0.8157737386060239 1.0 13.4009304268651 -7.251232554018659 24.886043925642305 0.9487810784654278 0.8570115495278474 0.2526828573897656 0.073110448729216 641.5266232742626 1564154.3873498675 0.009768784637077569 0.01679863227959406 5.607476290551147e-08 7.251232554018659 -0.09176952893758039 SVGKVEPSSQS(ph)PGRS(ph)PR ddPTM_A549_PD325901_60min_R1 3 SVGKVEPSSQSPGRSPR 17 2 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 2 SVGKVEPS(0.007)S(0.038)QS(0.955)PGRS(1)PR;SVGKVEPS(0.015)S(0.095)QS(0.89)PGRS(0.999)PR;SVGKVEPS(0.034)S(0.134)QS(0.832)PGRS(1)PR 97.25299999999999 1.5175999999999999e-06 53849000.0 8434.1 8762.0 8322.8 10944.0 9818.7 11264.3 10570.9 11477.0 12317.3 11357.1 10108.3 True False 9290.323623143744 9500.404490241679 8887.635257062118 11619.986024372649 9129.068384676124 11172.567275466763 10973.181384118428 11248.082231467683 11799.646715564562 10640.010767785185 8865.043181793155 1.047972743350424 1.0716704132646997 1.002548445033563 1.310764740349775 1.0297827317327928 1.2602947381477796 1.237803489401487 1.2688130222048737 1.3310309350549399 1.2002209746295902 1.0 13.113911943198021 -6.233794054140126 24.779259874971917 1.1799576349572587 1.0438245097020489 0.31774205845867265 0.10245766522737454 935.4504797599244 838468.6433327062 0.018791387715823175 0.04970269245774999 5.837218441430272e-07 6.233794054140126 -0.13613312525520982 SVGKVEPSSQSPGRS(ph)PR ddPTM_A549_MK2206_60min_R1 3 SVGKVEPSSQSPGRSPR 17 2 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 SVGKVEPS(0.002)S(0.006)QS(0.012)PGRS(0.98)PR;SVGKVEPS(0.126)S(0.126)QS(0.126)PGRS(0.622)PR;SVGKVEPSSQS(0.037)PGRS(0.963)PR 82.56 3.7613e-05 92839000.0 9133.800000000001 12023.7 11522.9 10603.3 14593.5 11006.0 10369.5 9973.66 18172.199999999997 18303.1 18267.4 True False 10675.36214002991 12635.65497262499 13157.020488548744 13201.10897600022 12446.815481892547 12170.647614808478 12253.5039250179 11387.45684805273 14056.22571504036 14168.416997944985 13731.100425408076 0.7774586019541583 0.9202215832056643 0.9581912651518408 0.9614021139611536 0.9064688987971362 0.8863563179749141 0.8923905255505942 0.8293185902989494 1.023678021393731 1.0318486180268331 1.0 13.745159628826325 -8.779966269996724 24.999239608040288 1.0111813031185533 0.8973484776909595 0.5515981764427836 0.05069200499976243 138.66727395836602 187109.82640149308 0.008777619003667336 0.009352672281849538 1.6597158062562394e-09 8.779966269996724 -0.11383282542759376 SVGKVEPSSQSPGRS(ph)PR ddPTM_A549_PD325901_60min_R1 4 SVGKVEPSSQSPGRSPR 17 2 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 SVGKVEPS(0.001)S(0.004)QS(0.033)PGRS(0.961)PR;SVGKVEPSSQS(0.002)PGRS(0.998)PR;SVGKVEPSS(0.001)QS(0.005)PGRS(0.995)PR;SVGKVEPSSQS(0.017)PGRS(0.983)PR 107.25 1.9675e-09 139284000.0 13591.599999999999 12671.6 13959.7 14738.8 16432.6 20194.1 16872.699999999997 18821.7 16993.2 17631.8 19620.4 True False 14971.409226392901 13739.480202984061 14907.089188495458 15649.182201756537 15278.430865392445 20029.645944932523 17514.799831595716 18446.286428161984 16279.034899444834 16518.525138938185 17207.215183963133 0.8700657873068287 0.7984720395540268 0.8663278182508372 0.9094546697097936 0.8879083978464868 1.1640260048354514 1.0178753298743684 1.0720088190303825 0.9460586576854487 0.9599766703872689 1.0 14.07072601002599 -7.025444816534296 24.922813342154118 0.998652100853025 0.8621952101162227 0.6009637217597574 0.06305558024126723 460.7739540624202 451320.6665571858 0.009885745872382652 0.017168815134215414 9.430944377884515e-08 7.025444816534296 -0.13645689073680234 SVGPLPQADPEVS(ph)DIESR ddPTM_A549_MK2206_60min_R1 1 SVGPLPQADPEVSDIESR 18 0 Q9BV36-3 Q9BV36-3 MLPH Melanophilin 1 SVGPLPQADPEVS(1)DIESR 140.95 1.3162e-16 4847900.0 1425.9 1679.6 1270.7 1200.3 2286.0 1838.4 1612.8 2107.4 2115.4 2388.6 2755.9 True False 1666.5570600920385 1765.0844658483609 1450.9043673726997 1494.373553883515 1949.7324282458878 2032.9382677688452 1905.8248835786562 2406.1304036418255 1636.2652775996507 1849.0136010452534 2071.5339710293815 0.8045038524103455 0.8520663868096063 0.7004009529477906 0.7213850097476 0.9412022469885114 0.9813685395459107 0.9200065797770232 1.1615210936879674 0.7898809773254947 0.8925818388227764 1.0 11.016483763890028 -6.769650735575864 24.972606654944467 0.9287124936556437 0.7705382787217357 0.45793959926020344 0.09438875684328817 163.20804552196023 496354.1134498683 0.01589676046232108 0.030410576191749472 1.699609948105128e-07 6.769650735575864 -0.15817421493390793 SVGPLT(ph)RK ddPTM_A549_MK2206_60min_R1 1 SVGPLTRK 8 1 P29317;P29317-2 P29317 EPHA2 Ephrin type-A receptor 2 1 S(0.005)VGPLT(0.995)RK 45.368 0.031076 19903000.0 4149.2 4471.5 3656.1 4087.8 4499.0 3126.1 4178.2 3363.9 3955.6 4547.3 4835.6 True False 4849.48352179948 4699.080250679294 4174.589956363679 5089.311183508313 3837.203059789261 3456.901827062765 4937.324856503186 3840.74312651169 3059.6629157952075 3520.0617717629916 3634.787064229356 1.3341864148038236 1.2928075751462456 1.1485101830163942 1.4001676284130122 1.0556885429553549 0.951060341631235 1.3583532595601975 1.056662483563119 0.8417722583823254 0.9684368601408874 1.0 11.827655134259912 -7.599728644256151 0.6087378382746597 0.9278954275956826 1.2951991774739147 0.4356225815015565 0.13640172705912854 0.4989789998760769 0.37002731102727215 0.03308860885403241 0.07510022534443686 2.5134563980346728e-08 7.599728644256151 0.3673037498782321 SVGRDEREDITHTYK ddPTM_A549_MK2206_60min_R1 2 SVGRDEREDITHTYK 15 2 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 ; 95.57 5.7031e-06 33522000.0 2944.3 3452.0 3932.0 2961.3 3713.6 2954.3999999999996 2894.3 2771.0 4540.4 4728.0 4417.7 False True 3441.225858776202 3627.692055315874 4489.616725040888 3686.8186329378104 3167.334359376174 3267.032647027997 3420.1568455739725 3163.7977358315916 3512.0066495289093 3659.9415162613886 3320.6631676826096 1.0363068113221883 1.092460111769641 1.3520241284134988 1.1102657652298802 0.9538258472588657 0.983849454778625 1.0299619903818178 0.9527608119433295 1.0576220689013252 1.1021718649096082 1.0 11.697255674783912 -6.548503760318994 9.478999475587903 1.0152833996132131 1.1663564910873756 0.39393196732165725 0.08274501527911474 0.2061093450157341 72.14342267590487 0.011048319770333777 0.02313987889397959 2.828109623883077e-07 6.548503760318994 0.15107309147416248 SVGRDEREDITHTYK ddPTM_A549_PD325901_60min_R1 2 SVGRDEREDITHTYK 15 2 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 ; 122.93 1.0909e-07 37549000.0 4151.8 4076.6 3976.1 4799.6 6096.9 5642.4 5810.799999999999 5707.2 4859.4 5249.1 5679.9 False True 4573.287679606381 4420.149388828944 4245.942056231637 5096.060391317526 5668.674777163155 5596.450165131756 6031.933173791768 5593.365418788211 4655.176317018699 4917.67093018299 4981.308307852654 0.9180896658006372 0.8873470814606906 0.8523748770053506 1.0230365350572608 1.1379891439818972 1.123490018939277 1.2109134390021359 1.1228707546510814 0.9345288485115781 0.9872247663190521 1.0 12.28230899108415 -6.270668346120086 23.46311344521042 1.0227086187655174 0.8860781955638586 0.40937301431125706 0.08560630005373385 302.18647405073847 768261.3543033714 0.01520388325459866 0.03584432643995561 5.362059809469332e-07 6.270668346120086 -0.13663042320165886 SVGRDEREDITHTYKYPEGSSEER ddPTM_A549_MK2206_60min_R1 1 SVGRDEREDITHTYKYPEGSSEER 24 3 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 95.834 2.3037999999999998e-08 38176000.0 1350.5 1339.5 1163.5 1402.9 1629.1 1160.0 1485.0 999.81 1909.2 2040.4 2146.3 False True 1578.4313834450497 1407.6748285329115 1328.501795418381 1746.6105629785739 1389.46154805572 1282.7504300543187 1754.805277848651 1141.536129289709 1476.769248365914 1579.4722228806563 1613.3144751334812 0.9783779962145661 0.8725359192084633 0.823461151495876 1.0826225078244984 0.8612465638112865 0.7951025356963883 1.0877019359188873 0.7075719872873895 0.9153635395502977 0.9790231521662726 1.0 10.655811967727733 -10.205971346783327 1.0483027762274257 0.9916627334363916 0.9023231987157606 0.08341357142093475 0.10938997908379368 0.7977830093066761 1.7420277203244536 0.04030385082299652 0.018802916438311647 6.223413436994252e-11 10.205971346783327 -0.08933953472063094 SVGRDEREDITHTYKYPEGSSEER ddPTM_A549_PD325901_60min_R1 2 SVGRDEREDITHTYKYPEGSSEER 24 3 P21980-2;P21980 P21980-2 TGM2 Protein-glutamine gamma-glutamyltransferase 2 0 ; 148.53 1.1078e-28 92208000.0 3350.3 3727.3 3573.8 4694.6 4623.7 6081.4 5382.2 6865.6 4799.4 4641.9 5357.6 False True 3690.4199896394966 4041.412651960488 3816.3395590052146 4984.574779789824 4298.947262899058 6031.875094681744 5587.022566252847 6728.660222040994 4597.697908363078 4348.809641808389 4698.6491646246195 0.785421481864209 0.8601222415982107 0.8122205819787156 1.060852727059916 0.9149325928109607 1.2837466436299967 1.1890699583013453 1.4320414200532365 0.9785148342162705 0.9255446596332161 1.0 12.198030334301068 -6.262238514863894 24.2540597318496 1.0549104959388382 0.8233415086665252 0.37234221623180686 0.15395483689706468 46.96536061838488 1425469.9823987458 0.02312860045871507 0.0568346977112787 5.467156237866991e-07 6.262238514863894 -0.231568987272313 SVGRPS(ph)PLASGR ddPTM_A549_MK2206_60min_R1 2 SVGRPSPLASGR 12 1 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 S(0.001)VGRPS(0.998)PLAS(0.001)GR;S(0.002)VGRPS(0.998)PLASGR 85.421 0.00011086 87094000.0 12176.7 13232.2 11741.0 11497.2 16602.3 12167.599999999999 12116.9 12172.8 18060.6 18888.0 19124.0 True False 14231.829268267564 13905.662460704143 13406.050348093864 14314.014516128918 14160.12366293382 13455.167355800802 14318.383886305943 13898.331677636519 13969.90293685178 14621.187681714291 14374.983004450789 0.9900414674480726 0.9673515757478576 0.9325959094312025 0.9957587088413953 0.9850532455272856 0.9360127487896721 0.9960626653869906 0.966841607627175 0.9718204837199746 1.0171273021461849 1.0 13.81127262990844 -10.737863720839217 0.5095809538226581 1.006411946492825 0.9696895769081705 0.3028096613318376 0.020990793129011524 1.795448467988194 0.6187171124241893 0.03260209800022323 0.004682650069470298 1.8286739537006862e-11 10.737863720839217 -0.03672236958465447 SVGRPS(ph)PLASGR ddPTM_A549_PD325901_60min_R1 2 SVGRPSPLASGR 12 1 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 SVGRPS(1)PLASGR;S(0.002)VGRPS(0.998)PLASGR 115.63 7.2265999999999996e-06 154425000.0 5572.6 5037.1 5280.6 5857.6 5784.2 5090.4 4850.4 5874.1 6132.0 6076.4 5952.3 True False 6138.326249668703 5461.594094703987 5638.973270827397 6219.410648425191 5377.937746406718 5048.945470116738 5034.984626240725 5756.936467357696 5874.293364604409 5692.735066995091 5220.204834738527 1.1758784269958946 1.0462413387227842 1.080220690441517 1.191411227206511 1.0302158472055611 0.9671929799608395 0.9645185937407609 1.1028181172216498 1.1252993992713016 1.0905194809812921 1.0 12.349890702235712 -2.000000000153136 0.5633830294743877 1.0530339662653279 5.95882540447366 0.18679722505008955 0.06624043580216205 201.79990324509922 1.6055523427128113 0.013052556481673002 1209.259971236924 0.00999999999647391 2.000000000153136 4.9057914382083325 SVIDPVPAPVGDSHVDGAAKS(ph)LDK ddPTM_A549_MK2206_60min_R1 2 SVIDPVPAPVGDSHVDGAAKSLDK 24 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 SVIDPVPAPVGDS(0.001)HVDGAAKS(0.999)LDK;SVIDPVPAPVGDS(0.128)HVDGAAKS(0.872)LDK 85.98200000000001 1.082e-06 6685100.0 1933.8600000000001 2088.26 1498.78 1986.96 2674.7 1955.94 1873.8 1788.3 2789.8 2942.5 3073.8 True False 2260.24828966238 2194.543514320371 1711.3295409859575 2473.765289198024 2281.2551731536646 2162.916272552107 2214.245205139934 2041.7970014390612 2157.9147543951526 2277.7872063449963 2310.4906274357245 0.9782546887761647 0.9498171030262795 0.7406779844353923 1.0706666626661492 0.9873466466667703 0.9361285637209438 0.9583441624246676 0.8837071127638071 0.9339638641123134 0.9858456811283308 1.0 11.173983521849102 -8.033375187936915 0.008067707113146128 1.8931794602505305 1.6670556252316436e-05 0.042701318622611284 0.07760905897903914 4267.262626329975 20.37747829791832 2364.2812209067406 2415.8532423882157 9.260294788611319e-09 8.033375187936915 -1.8931627896942782 SVIDPVPAPVGDSHVDGAAKS(ph)LDK ddPTM_A549_PD325901_60min_R1 2 SVIDPVPAPVGDSHVDGAAKSLDK 24 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 SVIDPVPAPVGDS(0.003)HVDGAAKS(0.997)LDK;SVIDPVPAPVGDS(0.002)HVDGAAKS(0.998)LDK 114.61 4.5492e-16 10836400.0 2579.7 2825.4 2963.2 2927.4 3962.7 3476.0 3255.6 3261.1000000000004 4299.1 3480.8 4065.9 True False 2841.589244925231 3063.5063737421638 3164.3005711691344 3108.218849392224 3684.3736225728517 3447.6926084641277 3379.4936395326786 3196.0548022165417 4118.423777522965 3261.021693962956 3565.820075863676 0.7968964177860183 0.8591309456353188 0.887397710441885 0.8716701300862421 1.0332472037811558 0.9668722860698639 0.947746540103859 0.89630287962368 1.1549724018325416 0.9145222205786996 1.0 11.800018193960403 -6.669130529472718 0.4780950296785015 1.0641201422551212 0.7825825241164013 0.2633139926582678 0.08030442561173877 0.9592998032706481 0.31392964416607466 0.019732816218805252 0.12165220275523744 2.1422466409457665e-07 6.669130529472718 -0.2815376181387199 SVIDTS(ph)TIVR ddPTM_A549_MK2206_60min_R1 1 SVIDTSTIVR 10 0 O43815-2;O43815 O43815-2 STRN Striatin 1 SVIDT(0.118)S(0.582)T(0.299)IVR 68.132 0.0042435 9709200.0 812.41 891.83 978.24 686.8 1105.7 962.88 840.34 675.64 1497.9 1214.0 1422.7 True False 949.5249464824827 937.2203376860817 1116.9691416846379 855.0660308316232 943.0529947119329 1064.771322491985 993.0189004628527 771.414039060721 1158.628041654779 939.7565568403821 1069.404325477522 0.8879007909926777 0.8763947511317424 1.0444778603133822 0.7995722576209048 0.8818488687997692 0.995667678842174 0.9285719879797935 0.7213492789233491 1.0834330982693716 0.8787663696990863 1.0 10.062591701869728 -8.820234836907426 24.999997794487875 1.0393990556919857 0.8977933641084042 0.10038311003830203 0.09673181389421065 57.5630951566613 24475.62058398461 0.014383158413203579 0.0153120406623877 1.5127430387282501e-09 8.820234836907426 -0.1416056915835815 SVIDTST(ph)IVR ddPTM_A549_MK2206_60min_R1 3 SVIDTSTIVR 10 0 O43815-2;O43815 O43815-2 STRN Striatin 1 SVIDT(0.006)S(0.091)T(0.903)IVR;SVIDT(0.027)S(0.233)T(0.739)IVR;SVIDT(0.002)S(0.048)T(0.95)IVR 123.62 2.9218e-05 22685300.0 4681.6 5744.4 4719.5 4690.7 6680.5 5524.0 4626.799999999999 4737.299999999999 7489.9 7063.2 7628.5 True False 5471.739625869197 6036.7654236838025 5388.7960665896435 5839.921710573525 5697.8072996048395 6108.546013465563 5467.429669730732 5408.826782372794 5793.44960891256 5467.618214394558 5734.1329141106835 0.9542401105499694 1.0527773796153894 0.9397752279736615 1.0184489613420913 0.9936650204922085 1.0652955041264418 0.9534884788380746 0.9432684702969879 1.0103444924786986 0.9535213599495959 1.0 12.485359630521645 -5.605418232611963 0.022086287201615085 1.0517198754659653 0.9363509259970476 0.0 0.043484921375328396 6408.1528292167095 23.095006048692387 51.6277702704543 70.05362900109138 2.4807429590032563e-06 5.605418232611963 -0.11536894946891774 SVKT(ph)SPTTQSK ddPTM_A549_MK2206_60min_R1 1 SVKTSPTTQSK 11 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.004)VKT(0.493)S(0.493)PT(0.006)T(0.004)QSK 62.258 0.028265 2696100.0 911.3 967.45 787.16 676.0 1006.3 695.42 465.96 719.88 954.55 1083.0 1323.4 True False 1065.1051608541086 1016.6890726869467 898.791124436212 841.6200303467926 858.2746030375488 769.008882817564 550.6189005160659 821.9251945400383 738.3459491031238 838.3495478238334 994.7632560181005 1.0707122065581482 1.022041241005033 0.9035226411899736 0.8460505806333067 0.8627928281881894 0.773057185380771 0.5535175301107492 0.8262520650693221 0.7422328324214752 0.8427628812704949 1.0 9.95820940889017 -5.786538336981227 1.772811340753457 0.8380239109054849 1.0774401623949554 0.41954398448386 0.10504830921374114 0.43689208173181593 2.426578407376386 0.019205579357584858 0.12468426454956089 1.6347888351466104e-06 5.786538336981227 0.23941625148947054 SVKT(ph)SPTTQSK ddPTM_A549_PD325901_60min_R1 1 SVKTSPTTQSK 11 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.005)VKT(0.669)S(0.281)PT(0.023)T(0.023)QSK 84.289 0.0020431 20261000.0 1933.0 1532.3 1992.8 1943.2 2210.5 2140.8 2364.2 2353.4 2015.8 2208.8 2090.9 True False 2129.2367370006095 1661.432298607318 2128.043391679891 2063.2270506726004 2055.242105811011 2123.3660345799785 2454.170924739881 2306.4595907934163 1931.0829361333278 2069.3359910438335 1833.7325553071544 1.1611490077101005 0.9060385026152433 1.1604982337914806 1.125151562969882 1.120797086719526 1.1579475035411093 1.3383472511501557 1.2577949734916927 1.0530886472754295 1.1284829868209516 1.0 10.840567525957306 -8.952316186342172 10.427405841199118 1.02335440994189 1.1501572275369325 0.11439700116187701 0.10443362111962465 0.5080020441500601 108.2199934893123 0.018453321911475435 0.01953798474215598 1.1160504159326463e-09 8.952316186342172 0.12680281759504242 SVKTS(ph)PTTQSK ddPTM_A549_MK2206_60min_R1 4 SVKTSPTTQSK 11 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.001)VKT(0.18)S(0.405)PT(0.405)T(0.004)QS(0.006)K;SVKT(0.013)S(0.902)PT(0.075)T(0.01)QSK;S(0.017)VKT(0.188)S(0.333)PT(0.333)T(0.053)QS(0.075)K;S(0.043)VKT(0.238)S(0.426)PT(0.257)T(0.035)QS(0.001)K 91.81200000000001 8.2289e-05 150515000.0 12685.619999999999 13648.43 12614.369999999999 11796.75 15931.920000000002 11089.779999999999 11995.84 9871.64 17375.5 18645.4 17945.489999999998 True False 14826.642522368147 14343.07678984206 14403.277346860126 14686.954279576235 13588.355672886808 12263.293158799808 14175.32885133197 11270.975200629582 13439.9769929719 14433.391190207305 13489.129562672113 1.0991548753002771 1.0633063255269664 1.067769219647626 1.0887992595325655 1.0073560054230095 0.9091241285676054 1.050870538789897 0.835559859386277 0.9963561348067832 1.0700016723205186 1.0 13.719509635461106 -6.861614556770753 4.764413043810398 0.9826510578548884 1.077549556644977 0.38086974635374404 0.06092521809433582 0.16212430656647686 6.221558446515083 0.007704244899175885 0.01493356001698248 1.3752620003375394e-07 6.861614556770753 0.09489849879008871 SVKTS(ph)PTTQSK ddPTM_A549_PD325901_60min_R1 2 SVKTSPTTQSK 11 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SVKT(0.069)S(0.923)PT(0.007)T(0.001)QSK;SVKT(0.098)S(0.79)PT(0.098)T(0.013)QSK 115.14 1.7889e-05 208884600.0 8835.0 7566.599999999999 8912.4 8360.7 10030.3 10360.4 10300.4 9375.0 9172.2 8827.9 9621.3 True False 9731.922696016762 8204.263936985008 9517.249058614936 8877.12145047263 9325.806330656496 10276.028337379672 10692.38735859515 9188.008270454779 8786.724331184696 8270.504887421157 8437.941094445809 1.1533527654539688 0.9723063772494671 1.1279112940098113 1.0520482841858079 1.105222971607981 1.2178359889409238 1.2671796637254682 1.088892203395766 1.0413351115911997 0.9801567461599293 1.0 13.042675300751284 -8.761160095373024 3.128704126643841 1.017937291158278 1.1245191403136277 0.3312676814290283 0.0744690604761077 0.2444622322341624 4.813122507129762 0.013922180852007448 0.015150461503420712 1.7331649777938987e-09 8.761160095373024 0.10658184915534963 SVKTSPT(ph)TQSK ddPTM_A549_PD325901_60min_R1 1 SVKTSPTTQSK 11 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.014)VKT(0.37)S(0.187)PT(0.374)T(0.042)QS(0.014)K 42.041000000000004 0.032651 203820000.0 3318.7 3365.2 3229.9 2849.5 3954.9 3968.5 3916.3 3576.3 3410.0 3963.6 4390.8 True False 3655.611980902187 3648.797214170429 3449.1004369665206 3025.507143315959 3677.1214676643162 3936.1818517519805 4065.3369395815917 3504.9678909469253 3266.689558594429 3713.3376195677943 3850.7594355744714 0.9493223459067701 0.9475526257137087 0.895693562444513 0.7856910289864945 0.9549081237570866 1.0221832647836557 1.0557234248457041 0.9102017276298747 0.8483234575537932 0.9643130612789952 1.0 11.910927282649157 -5.566961220982063 24.897478341305494 0.9308867668457884 0.948880908867049 0.0 0.07382741123883496 806.8704985785232 455713.4176012683 0.011629816812037857 0.045042140712536725 2.710433641095784e-06 5.566961220982063 0.017994142021260595 SVLISLK ddPTM_A549_MK2206_60min_R1 2 SVLISLK 7 0 P09496-2;P09496-4;P09496-3;P09496;P09496-5;C9J8P9 P09496-2 CLTA Clathrin light chain A 0 ; 89.55 0.035019 2145210.0 1423.9099999999999 1618.99 1482.3600000000001 1475.82 2144.45 1318.54 1317.31 1684.58 2488.1 1889.3799999999999 2371.0699999999997 False True 1664.2311967428664 1701.3896757346024 1692.5809380802677 1837.3959662520767 1829.0042457357365 1458.0670276239846 1556.6481754631702 1923.3743738098826 1924.5493226792535 1462.5677457686015 1782.2678807970672 0.9337716370664704 0.9546206235696205 0.9496781916550673 1.030931425095511 1.0262229743588085 0.8180964507826437 0.8734086453754667 1.0791724378434682 1.0798316815419213 0.8206217266926848 1.0 10.799498479688104 -8.273674766280426 24.96374637622967 1.041862189919478 0.9438361335934 0.0 0.08991356357269702 670.3031385862486 1367610.5680853953 0.011040234849876021 0.013398792484018448 5.325068928484812e-09 8.273674766280426 -0.09802605632607797 SVLISLK ddPTM_A549_PD325901_60min_R1 2 SVLISLK 7 0 P09496-2;P09496-4;P09496-3;P09496;P09496-5;C9J8P9 P09496-2 CLTA Clathrin light chain A 0 ; 112.17 0.02189 4221000.0 3381.1 3441.3 3369.1 3524.9 3930.1 3478.8 3613.1000000000004 3542.2 4045.7000000000003 3626.5 3971.7000000000003 False True 3724.346782965733 3731.3104282434 3597.747386044116 3742.6250673712693 3654.0633341089597 3450.469806192462 3750.5984976641853 3471.5480421978577 3875.673298300727 3397.522171097637 3483.206078680676 1.0692295255686948 1.0712287312201458 1.0328838732983678 1.074477071649132 1.0490517217669184 0.9906016836934858 1.0767661783263736 0.9966530729966934 1.112674131462444 0.9754008503523589 1.0 11.76620011500721 -11.209198781317475 1.6587423105448535 1.0000094560734962 1.0601483868033996 0.2983743164574094 0.03559955183427145 0.42440721461368713 2.10317587406835 0.027346137170374183 0.005691216048120925 6.1773359202380756e-12 11.209198781317475 0.060138930729903395 SVLPPDGNGS(ph)PVLPDKR ddPTM_A549_MK2206_60min_R1 2 SVLPPDGNGSPVLPDKR 17 1 Q8N6S5 Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 1 SVLPPDGNGS(1)PVLPDKR;SVLPPDGNGS(1)PVLPDKR 140.97 1.5692e-16 34427000.0 15123.5 16162.1 14794.2 15824.7 20274.2 15211.0 15610.400000000001 15146.2 22743.0 22966.0 25813.0 True False 17675.97706592464 16984.68185608941 16892.240018718177 19701.75221039779 17291.89203707035 16820.617923755373 18446.607615709483 17293.220233292115 17591.746813108108 17777.964649420275 19402.91969744237 0.9109957337119027 0.8753673220803092 0.8706029959472985 1.0154014198695474 0.8912005155260068 0.866911690923125 0.9507129804872128 0.8912689689465474 0.9066546214396278 0.9162520345720809 1.0 14.243986141038272 -10.652999635984894 0.6940738920997774 1.007459967354442 0.907913255308585 0.03277707248678097 0.04741511628891988 0.6799506119090335 0.5166609599790449 0.039422615836350657 0.007987801410479516 2.223311754176632e-11 10.652999635984894 -0.09954671204585697 SVLPPDGNGS(ph)PVLPDKR ddPTM_A549_PD325901_60min_R1 4 SVLPPDGNGSPVLPDKR 17 1 Q8N6S5 Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 1 SVLPPDGNGS(1)PVLPDKR;SVLPPDGNGS(1)PVLPDKR;SVLPPDGNGS(1)PVLPDKR;SVLPPDGNGS(1)PVLPDKR 87.802 3.1793e-06 50285200.0 20368.6 22489.2 21476.200000000004 21529.4 26303.0 23033.7 22079.199999999997 23834.800000000003 25713.899999999998 24993.899999999998 27618.899999999994 True False 22436.405277429196 24384.443809854252 22933.70407888181 22859.222141185008 24455.56802042391 22846.121183998886 22919.436038201824 23359.396215961133 24633.234205495984 23415.780888514328 24221.950390632148 0.9262840075052952 1.0067085191985592 0.9468149223751788 0.9437399454845644 1.0096448727713567 0.9431990742097562 0.9462258682135658 0.9643895656311554 1.01697979758983 0.9667173993375197 1.0 14.564027417397675 -8.751961139639434 23.216232640091732 1.0080182369023756 0.9619117665673261 0.18349267764195254 0.02790467286806806 55.070906124502926 134891.3951065029 0.003987829617173489 0.004488952125479788 1.7702673534912693e-09 8.751961139639434 -0.04610647033504944 SVLT(ph)SPVANGVNLDYDGLGK ddPTM_A549_PD325901_60min_R1 1 SVLTSPVANGVNLDYDGLGK 20 0 I3VM54;Q9Y2K7;Q9Y2K7-3;Q9Y2K7-2 I3VM54 KDM2A Lysine-specific demethylase 2A 1 S(0.038)VLT(0.519)S(0.443)PVANGVNLDYDGLGK 82.34 0.00015296 855350.0 1148.7 902.57 1352.6 899.32 1113.4 1476.8 868.68 815.01 1084.8 1153.7 1139.0 True False 1265.3151783717553 978.6327414696901 1444.3955698445495 954.8689538960904 1035.1986250214798 1464.77343043148 901.7380927599357 798.7539861870235 1039.209628493618 1080.8551851083266 998.9102207158874 1.2666955969926346 0.9797003986687963 1.4459713594775283 0.9559106855586741 1.0363279938006698 1.4663714516623156 0.9027218603426528 0.7996254013845027 1.0403433731500409 1.0820343637426313 1.0 9.964211208184386 SVNEILGLAES(ph)SPNEPK ddPTM_A549_MK2206_60min_R1 2 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.5)S(0.5)PNEPK;SVNEILGLAES(0.5)S(0.5)PNEPK 63.336999999999996 0.00090525 1582210.0 670.31 792.03 624.73 743.36 821.0 673.04 676.85 635.56 930.6300000000001 1108.0 980.38 True False 783.4419404939295 832.3409439663468 713.3261079946069 925.4832333706981 700.2319875721238 744.2606460722056 799.8248837116896 725.6525763208684 719.8437909107327 857.7020304605801 736.9245888884882 1.0631236252756933 1.1294791305875358 0.9679770749277411 1.255872374630103 0.9502084719798694 1.0099549632273535 1.08535513100204 0.9847039809261604 0.9768215116779877 1.1638938955127849 1.0 9.525373182496638 -7.369882879248313 0.8620730876111536 0.9901002136615168 1.0893242382308774 0.0 0.09389790025279562 0.6361666497364248 0.9367350999185059 0.01293495102194104 0.029631385528064148 4.266945744916374e-08 7.369882879248313 0.09922402456936064 SVNEILGLAES(ph)SPNEPK ddPTM_A549_PD325901_60min_R1 3 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.574)S(0.426)PNEPK;SVNEILGLAES(0.5)S(0.5)PNEPK;SVNEILGLAES(0.5)S(0.5)PNEPK 327.27 2.9690999999999992e-173 17622300.0 5288.139999999999 5878.58 5525.62 5949.74 6488.869999999999 5844.370000000001 6559.96 6324.590000000001 6516.0 6485.7300000000005 6939.92 True False 5824.988079877083 6373.988567478306 5900.621801452348 6317.241926960064 6033.114156586244 5796.7753884147 6809.6028675478465 6198.441090905132 6242.155180000381 6076.219900938395 6086.353835777527 0.9570570882086985 1.047258956587435 0.9694838585897871 1.0379353710632635 0.9912526151735833 0.9524216870763259 1.118831249592955 1.018416158204395 1.025598469695765 0.9983349744177603 1.0 12.57136249335566 SVNEILGLAESS(ph)PNEPK ddPTM_A549_MK2206_60min_R1 2 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.037)S(0.963)PNEPK;SVNEILGLAES(0.023)S(0.977)PNEPK 243.01 3.3110999999999996e-74 16655000.0 3287.4 3981.3 4358.0 3123.0 5618.0 4691.1 3227.1 3911.2 5261.1 6355.9 5085.5 True False 3842.232750786568 4183.93116449278 4976.029930754882 3888.135140196796 4791.599642119596 5187.509088299842 3813.4222977409977 4465.624577547646 4069.46925025032 4920.097775635737 3822.6299973402233 1.0051280802641072 1.094516384636742 1.301729420377382 1.0171361452461134 1.2534824572227967 1.3570523675870534 0.9975912658024365 1.168207380953641 1.0645731480896259 1.2870975687050876 1.0 11.90034984925119 -8.976826965419843 0.9810629169126065 1.0167987833685799 1.1597083020795391 0.0 0.1402574261130898 0.5195564362776918 1.0279831704029798 0.026581669518745608 0.0250866087628273 1.0548070761355179e-09 8.976826965419843 0.14290951871095925 SVNEILGLAESS(ph)PNEPK ddPTM_A549_PD325901_60min_R1 1 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.117)S(0.883)PNEPK 264.01 8.986599999999998e-100 14310000.0 3708.2 3786.9 3747.7 4551.4 4298.6 4545.6 4574.0 4441.3 4456.7 4503.6 4958.0 True False 4084.6537341674402 4106.0353531267065 4002.041458750866 4832.52964102062 3996.681165364946 4508.582140688878 4748.066072988836 4352.714787367552 4269.400397591728 4219.241927410814 4348.197431351515 0.9393901262891461 0.9443074786625917 0.9203909256500673 1.1113868947571142 0.9191581634605516 1.0368853328004273 1.0919619331804429 1.0010389031517903 0.9818782300013237 0.9703427670944973 1.0 12.086201732562998 SVNELIYK ddPTM_A549_MK2206_60min_R1 2 SVNELIYK 8 0 P18124;A8MUD9 P18124 RPL7 60S ribosomal protein L7 0 ; 105.52 0.0054778 4113100.0 5760.0 6644.9 6728.9 5848.1 8407.8 6669.700000000001 6626.5 6470.200000000001 9590.7 8306.4 8433.9 False True 6732.147181520535 6983.0970273373205 7683.159201710992 7280.884762531182 7171.023757745307 7375.483227011459 7830.449275194667 7387.37066415647 7418.421763200803 6429.978470954659 6339.529866201499 1.0619316137955641 1.101516543768794 1.21194463372953 1.148489701318139 1.1311601820786152 1.163411701289244 1.2351782293734177 1.165286830422776 1.1701848433195805 1.0142673994226885 1.0 12.630160140034878 -10.651096069620467 0.8726272073138704 0.9978438343433689 1.1567386265104422 0.6070060110704838 0.04543096490825221 0.3329290987901614 0.4422151415198643 0.0341062302157938 0.008656921686279623 2.2330781923670143e-11 10.651096069620467 0.15889479216707336 SVNELIYK ddPTM_A549_PD325901_60min_R1 2 SVNELIYK 8 0 P18124;A8MUD9 P18124 RPL7 60S ribosomal protein L7 0 ; 108.98 0.0047317 10255300.0 10667.2 11289.3 11116.8 12610.2 14628.2 13068.3 11621.1 11898.400000000001 13566.2 12541.7 11859.9 False True 11750.126291222408 12240.688930801793 11871.252898748997 13389.103414157893 13600.76569655039 12961.876097581064 12063.347319809933 11661.077077885768 12996.059791731303 11749.814921620093 10401.2074861004 1.1296886738318246 1.1768526824562988 1.1413341109302053 1.2872643327277484 1.3076141125658443 1.246189552021013 1.1598025840683137 1.1211272434925452 1.2494760641106832 1.1296587379226783 1.0 13.344463401481958 -10.866948210863146 0.8391097694513567 0.983732646264046 1.2068012391037364 0.296851467608653 0.07140176548082662 0.43347755905191654 0.47332891001749855 0.06600334169551975 0.011959597457843368 1.3584754336222373e-11 10.866948210863146 0.22306859283969038 SVNELIYKR ddPTM_A549_PD325901_60min_R1 1 SVNELIYKR 9 1 P18124;A8MUD9 P18124 RPL7 60S ribosomal protein L7 0 51.927 0.025276 1862600.0 2451.4 2216.5 2473.3 2373.9 2890.2 3085.6 2627.5 2456.1 3301.7 3077.5 3324.1 False True 2700.264323374701 2403.2922338074254 2641.153011161117 2520.5304114819296 2687.202322648716 3060.471896627421 2727.4909503231697 2407.111158726823 3162.941030971035 2883.1861247905636 2915.2567732060425 0.9262526540346891 0.8243844095984774 0.9059761169018806 0.8645997960275678 0.9217720879157671 1.0498121210989173 0.9355920121312752 0.8256943885185152 1.0849613866063 0.9889990313339674 1.0 11.509407244971653 -7.70539857425066 0.569916246001713 1.035348172777921 0.8710642776902132 0.2209594063137409 0.07184191285772816 0.6241538581436188 0.4120302168767598 0.01890477057925115 0.04040592388295017 1.9706133733232182e-08 7.70539857425066 -0.1642838950877078 SVNFSLT(ph)PNEIK ddPTM_A549_MK2206_60min_R1 1 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SVNFS(0.013)LT(0.987)PNEIK 147.39 6.2387e-12 48635000.0 2697.7 2674.7 2614.5 2581.7 3282.6 2619.1 2324.7 2596.7 3564.5 3516.6 3859.0 True False 3153.005807567354 2810.8308054326076 2985.275413941862 3214.216615896918 2799.7338884339265 2896.251423582126 2747.067898595797 2964.7901770602307 2757.146441336842 2722.1976176152284 2900.703797018175 1.0869795843369243 0.9690168325087333 1.0291555508048162 1.1080816383944556 0.9651912378340587 0.9984650713248882 0.9470349580056018 1.0220933899241744 0.9505094743458794 0.9384610798295073 1.0 11.502187268102 -6.805383856949446 24.999985245159834 0.978367633818806 1.0412769682254137 0.4264445102058586 0.04070720784161724 104.81564125289222 59629.25504779215 0.005510760830060059 0.010414387585039141 1.5653668881572015e-07 6.805383856949446 0.06290933440660773 SVNFSLT(ph)PNEIK ddPTM_A549_PD325901_60min_R1 1 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SVNFS(0.018)LT(0.982)PNEIK 65.563 0.0051792999999999995 2528600.0 409.08 468.53 468.66 513.52 511.49 687.83 531.71 481.71 593.3 511.23 611.64 True False 450.60950045122087 508.0146674061779 500.46608588152196 545.2389641114626 475.5647069447067 682.2285405293101 551.9445150128764 472.10191615581533 568.3656642563266 478.95085055294237 536.4121575054133 0.8400434146511182 0.947060316023973 0.9329879624819492 1.0164552694836342 0.8865658622584582 1.2718364619139437 1.0289560131889932 0.8801103956169207 1.0595689458261222 0.8928784403028913 1.0 9.067198125328083 -5.508172755153507 0.8204832202118004 1.0276312566682184 0.7935624614542636 0.1522561464833908 0.1056220044765604 1.900696029871308 1.1523726637018439 0.014806072636369086 0.37086788428617734 3.103324891319224e-06 5.508172755153507 -0.23406879521395485 SVNGS(ph)HKYK ddPTM_A549_PD325901_60min_R1 2 SVNGSHKYK 9 1 Q59FP8;Q92859-4;Q92859;Q92859-3;Q92859-2 Q59FP8 NEO1 Neogenin 1 S(0.024)VNGS(0.976)HKYK;SVNGS(1)HKYK 96.64 0.00037337 8076900.0 2059.25 2219.9 2353.4 3009.0 2929.2 3427.3 2920.1 3019.3999999999996 2466.0 3103.8 2961.9 True False 2268.3035440602735 2406.978763739728 2513.1158761438455 3194.85909606518 2723.4630971914107 3399.3892051176917 3031.226003440034 2959.1756983265223 2362.362595746001 2907.8255383021783 2597.605077031071 0.8732287922122588 0.9266145901172865 0.96747419319653 1.2299248736134825 1.0484515607369342 1.308662827608506 1.1669310436152096 1.1391938383908258 0.9094387043799822 1.1194255678102052 1.0 11.342966394155575 -8.762437993146486 24.999994756126743 0.9572349416394976 1.0876501435920016 0.015874803695849482 0.1335997516695236 35.71240059959485 894045.4541110062 0.02288830994925864 0.02504767929328266 1.7280726902994962e-09 8.762437993146486 0.130415201952504 SVPAGLTLQSVS(ph)PQSLQGK ddPTM_A549_PD325901_60min_R1 1 SVPAGLTLQSVSPQSLQGK 19 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3;H0YG48 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 SVPAGLT(0.003)LQS(0.052)VS(0.91)PQS(0.034)LQGK 77.221 0.00038302 1908800.0 1337.6 1270.3 1461.1 1454.3 1625.5 1737.8 1556.1 1699.6 1534.5 1740.0 1458.0 True False 1473.3921673109237 1377.352639118237 1560.2590323080535 1544.128808045061 1511.3304876705708 1723.6479329657543 1615.3182370305933 1665.700144689593 1470.0103013674934 1630.1361030497421 1278.6752430234976 1.152280201990153 1.077171585696311 1.2202152507611985 1.207600457168377 1.1819502222448188 1.3479950772254685 1.263274819657167 1.3026764643936906 1.1496353819219753 1.2748632711424022 1.0 10.320434180803211 -9.790617681422264 0.9613405325655972 1.0221441291848088 1.2156220320486084 0.0 0.10425693705958766 0.28354720775969067 0.5406607564366204 0.0262129462437124 0.015627630685177134 1.6195050947353756e-10 9.790617681422264 0.19347790286379962 SVPEPPPES(ph)PGQPNLRPDDSAFGR ddPTM_A549_MK2206_60min_R1 1 SVPEPPPESPGQPNLRPDDSAFGR 24 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 S(0.002)VPEPPPES(0.998)PGQPNLRPDDSAFGR 63.323 0.00010032 2998300.0 1084.6 1800.6 960.17 1176.7 2107.5 1459.4 1816.0 1530.0 2890.2 2146.7 2551.6 True False 1267.6539640758988 1892.2428490155723 1096.336543968085 1464.9915528240708 1797.4895417883681 1613.8327393286845 2145.9436933152515 1746.882185428488 2235.574314701009 1661.758979052099 1917.9672994225382 0.6609361715695383 0.9865876491143979 0.5716137831433153 0.7638250940280111 0.9371846654161187 0.841428704136185 1.1188635457764855 0.9107987325719471 1.1655956362624618 0.8664167421167304 1.0 10.905362407852797 -7.390826785705081 1.1052177653571704 1.0714655840758662 0.7536428063720924 0.36599696768700885 0.1368634206928752 0.26409791445264 0.6399582376089271 0.02040160301863009 0.04137961890751264 4.066054676197306e-08 7.390826785705081 -0.3178227777037739 SVPGTTSSPLVGDIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SVPGTTSSPLVGDISPK 17 0 H0Y6S1;B4DRC2;Q9UQR0;Q9UQR0-2 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 SVPGTTSS(0.01)PLVGDIS(0.99)PK;SVPGTTSS(0.021)PLVGDIS(0.979)PK 207.53 9.919899999999998e-50 46657000.0 3548.0 4112.4 4359.1 3681.8999999999996 4930.1 3395.8 3632.4 3505.3 4755.3 5108.4 5259.3 True False 4146.815659728276 4321.703594519408 4977.285927295459 4583.96566528677 4204.88882086398 3755.141302050391 4292.3600614528195 4002.187009531032 3678.2321426536946 3954.4088920621152 3953.2706607042455 1.0489581957916212 1.0931969919179603 1.2590298905587185 1.1595375218933708 1.063648098436779 0.9498821670311439 1.0857743953934507 1.0123736402146755 0.9304276024446161 1.0002879214340632 1.0 11.948831017327414 -7.00353754466223 3.4078159127418375 0.9791226880027238 1.1445441272403423 0.5307119655104579 0.061784367126935864 0.13259112301631765 3.251549009476329 0.009750793036543033 0.018517873926513297 9.918875870692448e-08 7.00353754466223 0.16542143923761843 SVPGTTSSPLVGDIS(ph)PK ddPTM_A549_PD325901_60min_R1 3 SVPGTTSSPLVGDISPK 17 0 H0Y6S1;B4DRC2;Q9UQR0;Q9UQR0-2 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 SVPGTTS(0.001)S(0.07)PLVGDIS(0.929)PK;SVPGTTSSPLVGDIS(1)PK;SVPGTTSSPLVGDIS(1)PK 253.48 4.170199999999999e-86 59974000.0 11943.0 11555.2 11889.9 13001.2 15497.0 13484.7 13767.3 14773.8 13696.3 13473.0 14172.099999999999 True False 13155.44456802808 12528.997256977935 12696.820113776965 13804.254596132465 14408.544181747671 13374.885074038031 14291.222135255628 14479.124969178105 13120.692141166246 12622.31248068343 12429.021544343845 1.0584457128095344 1.0080437315421331 1.0215462310108383 1.1106469279888291 1.159266168325588 1.0761012060619226 1.1498268052933922 1.1649448765954722 1.0556496417963943 1.015551581083834 1.0 13.601425106455942 -9.495081930587288 1.4750896827733473 1.0143923852507477 1.0914757612259316 0.28123752264505575 0.05061527797412651 0.3517589817583033 1.5643511430636656 0.013311247672820482 0.010620611861246715 3.1982916881748627e-10 9.495081930587288 0.07708337597518389 SVPGYKVEEKS(ph)P ddPTM_A549_MK2206_60min_R1 3 SVPGYKVEEKSP 12 2 S5FZ81 S5FZ81 PHF10 1 SVPGYKVEEKS(0.999)P;SVPGYKVEEKS(1)P;SVPGYKVEEKS(1)P 83.37 0.00018744 56888000.0 15672.6 18145.7 18146.7 15652.5 22537.9 18211.2 15663.8 16682.4 24615.800000000003 27779.4 25341.800000000003 True False 18317.75172171855 19069.238623448786 20720.17492988288 19487.363202667428 19222.6047657756 20138.297096383794 18509.709704488676 19047.181287707313 19040.36060335517 21504.014246368788 19048.731661900787 0.9616257946641001 1.0010765525974108 1.087745646148459 1.0230268108424219 1.009127804777815 1.057198844197183 0.971703000127289 0.9999186101090093 0.9995605450959048 1.1288948066489273 1.0 14.217407320260017 -7.770016062363443 24.99995491282576 0.9978834858133994 1.0245627820494478 0.0 0.050155461502968575 272.0871346707636 793096.427340456 0.004713671778201024 0.006568201789312006 1.698180844152015e-08 7.770016062363443 0.026679296236048478 SVPGYKVEEKS(ph)P ddPTM_A549_PD325901_60min_R1 2 SVPGYKVEEKSP 12 2 S5FZ81 S5FZ81 PHF10 1 SVPGYKVEEKS(1)P;SVPGYKVEEKS(1)P 117.0 7.4992999999999995e-06 156410000.0 18857.7 18545.7 20596.6 19954.1 23510.0 26461.0 25038.0 23432.0 23905.0 25799.0 28474.0 True False 20772.119821694992 20108.61122513982 21994.409133417303 21186.619437950874 21858.73870509698 26245.510389116593 25990.834791319314 22964.630377951602 22900.355981876786 24170.046737115128 24971.87851155768 0.8318204740616961 0.8052502424210095 0.8807671046148041 0.8484191298682283 0.875334176200647 1.0510026459150617 1.0408041501279142 0.9196196580614844 0.9170457869750513 0.9678906104692347 1.0 14.608016731747552 -7.0667174199858565 6.843802555802896 0.9687752904256159 0.8440512925930048 0.6993266341741006 0.04375140887823467 0.13756613195576053 11.952515475948353 0.0075643640567868995 0.013216643691510332 8.575956708145188e-08 7.0667174199858565 -0.12472399783261112 SVPHLQK ddPTM_A549_MK2206_60min_R1 2 SVPHLQK 7 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 94.40700000000001 0.012927000000000001 38691000.0 3587.5 3407.2 3415.4 3121.2 4235.7 3503.0 3434.3 3376.7 4918.299999999999 4781.5 5055.4 False True 4192.982294045996 3580.6119266721444 3899.7550769849036 3885.8941401159914 3612.634140997859 3873.6851348967916 4058.267855700754 3855.3575657100473 3804.3129029112047 3701.3558291040276 3800.0046580579638 1.103415040598626 0.9422651414596048 1.0262500780664618 1.0226024675722167 0.9506920296366524 1.0193895754002793 1.067963916069192 1.0145665367895556 1.001133747255837 0.9740398136763464 1.0 11.891785471679627 -9.440252830489987 0.002451334898161908 3.3717831426271962e-06 2.0114789443489163 0.0554754211062638 0.043642097892583914 91908.60121516035 109.34164904650949 45067.94358832902 44651.487739692115 3.628667454143548e-10 9.440252830489987 2.011475572565774 SVPHLQK ddPTM_A549_PD325901_60min_R1 2 SVPHLQK 7 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 107.66 0.0098694 79882000.0 4528.4 4385.5 4038.4 4366.5 5406.200000000001 5492.4 5387.4 5313.3 4942.700000000001 5484.8 5437.1 False True 4988.119834368113 4755.081475913586 4312.470108871972 4636.208787958987 5026.487162377513 5447.671715399419 5592.420455098394 5207.322063296787 4734.975507702255 5138.488791958179 4768.371168616642 1.04608463938331 0.9972129491952046 0.9043906097861649 0.9722835375049053 1.0541308519478685 1.1424596623798162 1.172815675907381 1.0920546826491047 0.9929964216850016 1.077619298132136 1.0 12.219280823792928 -5.209960133238161 18.846445920249128 1.0190330504476866 1.0460875533157332 0.0 0.07729769772263094 8281.199861043398 3029858.5197490933 0.011379668791364239 5.448527533720357 6.166516057913163e-06 5.209960133238161 0.02705450286804667 SVPNS(ph)TR ddPTM_A549_MK2206_60min_R1 1 SVPNSTR 7 0 Q03188;Q03188-2 Q03188 CENPC Centromere protein C 1 SVPNS(0.956)T(0.044)R 56.431999999999995 0.03762 8398600.0 1146.5 1232.5 1346.9 945.52 1381.0 1008.9 799.22 906.66 1038.1 1686.5 1994.6 True False 1340.0011707661972 1295.2289855668632 1537.9106731835132 1177.1724424460065 1177.8567293996373 1115.6611283463808 944.4279287287532 1035.1818315297992 802.9720075050575 1305.51847867488 1499.285771840489 0.8937596793980392 0.8638973369145428 1.0257622009549314 0.7851554817337701 0.7856118903561176 0.7441284038711451 0.6299185561998598 0.6904499802322767 0.5355696843033116 0.8707602667850676 1.0 10.550059679504276 -6.424257842367659 6.565695109606061 0.7559544806983022 0.9209634876005636 0.2941604526448931 0.11967341347841216 0.36380677425487956 20.651947013052574 0.024394142282598456 0.05700997159178588 3.764802148125826e-07 6.424257842367659 0.1650090069022614 SVPT(ph)PLVMAQK ddPTM_A549_PD325901_60min_R1 2 SVPTPLVMAQK 11 0 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.039)VPT(0.961)PLVMAQK;S(0.017)VPT(0.983)PLVMAQK 70.942 0.0013099000000000001 8191800.0 7605.1 8753.599999999999 8912.7 8879.5 10687.5 9176.400000000001 8699.7 9959.400000000001 8461.5 8716.3 10283.3 True False 8377.164153421289 9491.296592761864 9517.56941841899 9427.966548192344 9936.84686987341 9101.670440825721 9030.771844158508 9760.751954001851 8105.892580658875 8165.951330466936 9018.519291209557 0.9288846520056342 1.052422940649817 1.055336148994643 1.045400718650331 1.1018268685812933 1.0092200445473585 1.0013585991838918 1.0823009452910697 0.8988052604777118 0.905464751672303 1.0 13.138674868188566 -8.758284717531984 24.99999763813118 0.9522135956342467 1.0365272678434299 0.42683054155264655 0.05039423463922929 68.3574252783929 541717.7076196099 0.009184828633481178 0.010201415546874312 1.7446779908459909e-09 8.758284717531984 0.08431367220918318 SVPTSTVFYPSDGVATEK ddPTM_A549_MK2206_60min_R1 4 SVPTSTVFYPSDGVATEK 18 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ;;; 242.79 3.3523e-74 10180400.0 5263.5 5022.2 4722.4 4753.6 6052.700000000001 4997.0 5341.9 5709.4 7831.400000000001 7107.9 6369.5 False True 6151.850119780099 5277.808528449413 5392.107330196613 5918.23221339721 5162.355847963209 5525.779223259852 6312.454083326399 6518.724934304189 6057.600404176001 5502.220453349053 4787.777360743004 1.284907307975868 1.102350450069876 1.1262234903420456 1.2361126609443622 1.0782364047024267 1.1541428948990058 1.318451884393134 1.3615346836621836 1.2652218237725106 1.1492222880838336 1.0 12.225140350890864 -10.795872278438123 1.1015063060178738 1.0027849634086816 1.2128954526236575 0.1873590900845319 0.09647595496783805 0.3896596772987315 0.8565238897410745 0.060840809649626904 0.016081250932005246 1.600028511437198e-11 10.795872278438123 0.21011048921497588 SVPTSTVFYPSDGVATEK ddPTM_A549_PD325901_60min_R1 2 SVPTSTVFYPSDGVATEK 18 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 265.03 7.913899999999998e-100 19751100.0 5746.5 5904.9 4685.2 5376.9 6211.4 5793.0 5630.0 5921.0 5715.200000000001 5899.4 6280.2 False True 6329.880449650286 6402.5266462483505 5003.1658463963395 5709.018901174099 5775.132692166711 5745.82372866303 5844.252730854209 5802.90101006536 5475.0100191433685 5526.910877202098 5507.775213467883 1.1492626703740834 1.1624524237286549 0.9083823599340713 1.03653810838433 1.048541828294857 1.0432204485421008 1.0610913670847633 1.0535834861008526 0.9940511017507767 1.0034743000562956 1.0 12.4272539652256 -5.734523411384691 24.99600803593534 1.0098327965710687 1.1558577730358461 0.6272434074096978 0.04115738183933069 99.97452770200385 92841.71154329367 0.005696106799097537 0.02206472483390836 1.8427931473856878e-06 5.734523411384691 0.1460249764647774 SVPTWLK ddPTM_A549_PD325901_60min_R1 1 SVPTWLK 7 0 P62277;J3KMX5;E9PS50 P62277 RPS13 40S ribosomal protein S13 0 104.45 0.027953 2651300.0 2363.7 2194.1 2458.6 2598.7 2870.8 2703.6 2405.3 2336.0 2777.1 2787.4 2725.6 False True 2603.661083936029 2379.0045071946197 2625.4553807628367 2759.2157969240857 2669.1649117223474 2681.5827779757246 2496.835007730664 2289.406647443452 2660.3881446253918 2611.4030882993393 2390.368479001954 1.0892300106898711 0.9952459330403826 1.098347557636402 1.15430563160544 1.1166332451124017 1.1218282041166143 1.0445397978027067 0.9577630677255851 1.1129615237129378 1.0924688437113568 1.0 11.22301731368526 -11.003396661588848 1.1016165761650014 0.996870689243201 1.079209750929292 0.0 0.06140817088935188 0.7421699478091679 1.4962896400392511 0.05004824464903448 0.009694979872954222 9.922094029004728e-12 11.003396661588848 0.08233906168609095 SVPVNNLPERS(ph)PTDSPR ddPTM_A549_MK2206_60min_R1 4 SVPVNNLPERSPTDSPR 17 1 P49454 P49454 CENPF Centromere protein F 1 SVPVNNLPERS(0.499)PT(0.499)DS(0.002)PR;SVPVNNLPERS(0.997)PT(0.003)DSPR;SVPVNNLPERS(0.922)PT(0.038)DS(0.04)PR;SVPVNNLPERS(0.961)PT(0.021)DS(0.017)PR 154.34 1.3433000000000002e-22 76447000.0 10176.3 11303.300000000001 9120.2 9301.9 12591.1 11267.599999999999 10152.0 11135.2 16420.699999999997 15435.5 16091.4 True False 11893.81065335199 11878.589689702168 10413.581499419604 11580.86591757816 10738.965869329319 12459.929953172454 11996.486990383504 12713.648700119793 12701.437668469593 11948.609829579678 12095.461279952906 0.9833284054296355 0.9820700025215093 0.8609495130772019 0.9574554991773947 0.8878508740405088 1.0301326807455968 0.9918172372860684 1.0511090404788013 1.0500994856244992 0.9878589623847898 1.0 13.562178169422117 -7.2783638262127015 24.825318475295784 1.0242477922493445 0.9341909945779513 0.5272418504942517 0.03948320346571174 416.42733837799295 610827.9887351755 0.005810972766598384 0.00930331717302709 5.267883644055069e-08 7.2783638262127015 -0.09005679767139319 SVPVT(ph)PARPPPHNK ddPTM_A549_MK2206_60min_R1 2 SVPVTPARPPPHNK 14 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 SVPVT(1)PARPPPHNK;SVPVT(1)PARPPPHNK 147.09 1.9798e-13 26937000.0 4745.299999999999 3974.3 4221.0 3904.5 5477.5 4012.8999999999996 4019.2 4263.1 6590.1 6166.8 6933.799999999999 True False 5546.190628553715 4176.574894392202 4819.6012707013215 4861.102675279666 4671.767006000376 4437.542414452566 4749.436614632523 4867.407480196196 5097.452872227223 4773.71559697139 5211.946096855302 1.0641304659501531 0.8013465252283009 0.9247220100010806 0.9326847563163936 0.8963575062334488 0.8514175572786559 0.9112597341515407 0.9338944397627236 0.9780325386140967 0.9159180675048954 1.0 12.34760644796152 -8.691053751555541 1.95578530420635 0.9914488376853717 0.9059122886645044 0.07411294194111795 0.06462613265656515 0.28225131081504795 2.121013640038947 0.010181822029038893 0.011254364005916229 2.0367899736396758e-09 8.691053751555541 -0.08553654902086738 SVPVT(ph)PARPPPHNK ddPTM_A549_PD325901_60min_R1 2 SVPVTPARPPPHNK 14 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 SVPVT(1)PARPPPHNK;SVPVT(1)PARPPPHNK 133.86 3.6099999999999997e-09 48107000.0 7795.1 7493.3 8778.5 8449.2 9301.8 9293.5 9273.8 8950.2 11191.0 8770.6 8968.5 True False 8586.452813550675 8124.786688738642 9374.261799408829 8971.08789447454 8648.473657467934 9217.816817250105 9626.719533818085 8771.681239703928 10720.6811877508 8216.822819200042 7865.43135600565 1.0916696650075637 1.0329740761814623 1.191830603448228 1.140571634081412 1.099554908818115 1.1719404060670926 1.2239277285749373 1.1152193494138514 1.3630124913066624 1.0446754217651506 1.0 12.941310172757644 -7.274286858162067 18.633359632409178 1.175138285383987 1.1130655401396294 0.017605562445788703 0.09675982331859627 73.24916437998527 106238.38678805364 0.01979700287279982 0.03189180455418564 5.317569096541871e-08 7.274286858162067 -0.06207274524435746 SVQEGENPDDGVRGS(ph)PPEDYR ddPTM_A549_MK2206_60min_R1 2 SVQEGENPDDGVRGSPPEDYR 21 1 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 SVQEGENPDDGVRGS(1)PPEDYR;SVQEGENPDDGVRGS(1)PPEDYR 222.46 3.7678999999999993e-76 149016000.0 15410.5 19012.800000000003 15167.199999999999 15237.3 22225.0 15578.5 15373.6 12859.7 20653.0 22443.0 22108.0 True False 18011.41564944831 19980.470309765242 17318.13702747714 18970.43918402838 18955.73194127947 17227.006529828617 18166.784120898334 14682.601856179552 15975.128476063923 17373.110712659563 16617.973450240424 1.0838515119415915 1.2023409695287586 1.042132909848077 1.1415615291980095 1.1406765089641677 1.036649058407262 1.0932009354387013 0.8835374481818737 0.9613162834745532 1.0454409958398516 1.0 14.020456836774907 -7.856869069352095 1.866974256253644 0.9749369834764462 1.1187952416614773 0.522509892087391 0.059138473010734105 0.16806506451209327 1.1958112681450035 0.00864792152992804 0.012810072073677863 1.3903717358568354e-08 7.856869069352095 0.14385825818503106 SVQEGENPDDGVRGS(ph)PPEDYR ddPTM_A549_PD325901_60min_R1 2 SVQEGENPDDGVRGSPPEDYR 21 1 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 SVQEGENPDDGVRGS(1)PPEDYR;SVQEGENPDDGVRGS(1)PPEDYR 224.44 3.1550999999999996e-76 185751000.0 18803.4 19351.9 19680.7 21204.3 24153.0 21499.0 19860.4 21446.0 21465.0 19538.9 21664.0 True False 20712.30732566853 20982.752528498968 21016.350651663197 22514.041452540652 22456.576603326554 21323.91927197073 20616.198390027876 21018.242705938475 20562.900696548222 18305.210519470456 18999.46533941088 1.0901521151074014 1.1043864737064009 1.1061548457402464 1.1849828955891424 1.181958344730077 1.1223431234003307 1.085093607727128 1.1062544303465223 1.0822883870260436 0.9634592443767184 1.0 14.213671200051271 -9.666912666931752 0.49940401622331987 0.9986780595399067 1.131929652885158 0.7183999700349585 0.033304415712194294 0.4021975267778244 0.21697123971498494 0.022464857583089495 0.01000879612579797 2.1532146850537058e-10 9.666912666931752 0.13325159334525116 SVRIPS(ph)PNILK ddPTM_A549_PD325901_60min_R1 2 SVRIPSPNILK 11 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(0.024)VRIPS(0.976)PNILK;S(0.126)VRIPS(0.874)PNILK 47.201 0.0090946 6857500.0 2510.3999999999996 2575.3 3874.1 3625.1000000000004 3139.5 5492.7 4016.0 3807.5 4334.2 4202.6 4360.2 True False 2765.2539599411953 2792.3295690161376 4137.019722855813 3849.0141938005563 2918.9923506870236 5447.969272298881 4168.831077639523 3731.5564255740314 4152.048646586502 3937.247118779796 3823.923041585086 0.7231458190630706 0.7302264032642942 1.081878395005811 1.006561625833628 0.7633501822455736 1.4247068293614502 1.090197431356115 0.975845064085608 1.0858086319816211 1.0296355538441315 1.0 11.90083777329435 -5.757262883833736 24.90742484680312 1.0472139241086351 0.7266859428186749 0.42042895743110387 0.14676128969179897 66.55894473792982 396921.1481161626 0.018983006275518112 0.06859091949204212 1.7487878052415725e-06 5.757262883833736 -0.3205279812899602 SVRPTDSNVSPAIS(ph)IHEIGAVGATK ddPTM_A549_PD325901_60min_R1 1 SVRPTDSNVSPAISIHEIGAVGATK 25 1 A6NIT2;A6NMN0;P46020-3;P46020-2;P46020 A6NIT2 PHKA1 Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform 1 S(0.001)VRPT(0.001)DS(0.003)NVS(0.016)PAIS(0.98)IHEIGAVGATK 96.068 4.3435e-09 7015000.0 1746.4 1952.8 1639.3 2020.4 1907.4 1879.5 1909.5 1859.5 2398.8 2067.8 2262.5 True False 1923.6932423682695 2117.369309352196 1750.5527559117054 2145.19551933868 1773.4308041727775 1864.1939751462382 1982.1670674184923 1822.4108137504707 2297.986778051706 1937.2387551070447 1984.2268431691814 0.969492600601941 1.0671004258617736 0.8822341870527994 1.0811241298965604 0.8937641430857153 0.9395064790922654 0.9989619252668716 0.9184488255585433 1.15812704881131 0.9763191954468835 1.0 10.954361253334206 -8.750625918083925 24.99986151840327 1.0746711102531892 0.9704863167998606 0.13781907982128894 0.07504122522416386 204.90767160557797 473729.80904357566 0.01302765134113481 0.014701522509083421 1.7757183470114064e-09 8.750625918083925 -0.10418479345332854 SVS(ph)ANPK ddPTM_A549_MK2206_60min_R1 1 SVSANPK 7 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.08)VS(0.92)ANPK 96.331 0.011781999999999999 65767000.0 9125.6 8586.8 8093.7 5064.3 8946.6 8318.5 7156.4 8552.6 9710.2 11074.0 11120.0 True False 10665.778180500663 9023.831442811796 9241.508364054793 6305.053727345065 7630.566991489356 9198.758148626592 8456.625246057973 9764.957241239012 7510.855204003087 8572.375708772975 8358.597103612881 1.276024917613332 1.0795868410634815 1.1056291204728945 0.7543196123928259 0.912900442131749 1.100514600069737 1.0117278224120552 1.1682531314995732 0.898578446944958 1.0255758953937009 1.0 13.029045107171616 -5.427305276144227 1.6252950505872792 0.9695815106204951 1.3193365616226271 0.3490501902174754 0.10907044308576277 0.5597025061676241 1.7818492444590337 0.015597752257192024 0.27672377833435813 3.7384770925191425e-06 5.427305276144227 0.349755051002132 SVS(ph)ANPK ddPTM_A549_PD325901_60min_R1 4 SVSANPK 7 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.048)VS(0.952)ANPK;S(0.07)VS(0.93)ANPK;S(0.001)VS(0.999)ANPK;S(0.039)VS(0.961)ANPK 99.802 0.011342 169524900.0 26266.800000000003 27072.2 23794.3 22785.899999999998 29199.9 24868.9 22257.7 25227.300000000003 24939.6 28502.399999999998 34179.3 True False 28933.386199403867 29353.669303894163 25409.124284749516 24193.333292466443 27148.99975818635 24666.37592365752 23104.72895338079 24724.121711066015 23891.47534179521 26702.753599749973 29975.462780434194 0.9652356799738712 0.9792565845907175 0.8476641201794806 0.8071045798251393 0.9057074433528761 0.8228855749228979 0.770788064978996 0.8248120101486515 0.7970344116718635 0.8908203951793395 1.0 14.871494406612921 -4.240943034301841 16.56796704668084 0.8834588314766569 0.8744123593404065 0.0 0.07650275330070651 0.0 0.0 0.012504677955955655 0.0 5.741917730654618e-05 4.240943034301841 -0.009046472136250427 SVS(ph)CDNVSK ddPTM_A549_MK2206_60min_R1 2 SVSCDNVSK 9 0 Q96CB8;A0A087WXN4 Q96CB8 INTS12 Integrator complex subunit 12 1 S(0.049)VS(0.936)CDNVS(0.015)K;S(0.002)VS(0.996)CDNVS(0.001)K 84.71799999999999 0.0011290999999999999 7400400.0 2512.0 3436.3 2568.5 2479.0 3616.9 2179.3 2198.0 2744.9 4033.4 3481.8 3942.0 True False 2935.964187496459 3611.192992375995 2932.7519222450464 3086.3551112865407 3084.858801278456 2409.912079497738 2597.3481486271626 3133.997980903695 3119.8413400162776 2695.25896178488 2963.092606334709 0.9908445592350866 1.2187243100859322 0.9897604671467918 1.0415992752600145 1.041094292727614 0.8133097407572268 0.8765666463054066 1.0576780402352637 1.0529003829804238 0.9096100999417852 1.0 11.532888000604231 -5.844948782840431 24.999955197583233 1.0040410108520426 1.1048517768917099 0.1730925869650387 0.09331194622359762 30.891078151828072 9243.656098343377 0.012420105879221943 0.03861570473532015 1.4290624805818539e-06 5.844948782840431 0.10081076603966732 SVS(ph)EAALAQPQGPLGTDSLK ddPTM_A549_MK2206_60min_R1 1 SVSEAALAQPQGPLGTDSLK 20 0 M0R201;M0QY29;Q05469-2;Q05469 M0R201 LIPE Hormone-sensitive lipase 1 S(0.215)VS(0.785)EAALAQPQGPLGTDSLK 75.97 0.00034343 1120900.0 880.27 1230.2 1141.5 996.54 1564.7 1245.7 1218.4 1257.9 1821.2 1957.6 1837.1 True False 1028.8380554647713 1292.8119253909583 1303.38186460686 1240.6923447363806 1334.5347027455562 1377.5191471712633 1439.7675087749478 1436.2111771571856 1408.701107858791 1515.3768003877533 1380.8973686193544 0.7450503410643918 0.9362114482726074 0.9438658471121603 0.8984681794106442 0.9664256975736347 0.9975536042541172 1.0426317997943995 1.0400564225805824 1.0201345442979843 1.097385536988063 1.0 10.431390383920577 -3.9562918080100626 0.5112459406956429 1.0130910343653703 1.0542597466619424e-11 0.7700950988179467 0.04291335855441669 4.0656106101050105 0.26008859160635783 0.0065801448015020475 3.349523027353911 0.00011058804790672114 3.9562918080100626 -1.0130910343548276 SVS(ph)EAALAQPQGPLGTDSLK ddPTM_A549_PD325901_60min_R1 1 SVSEAALAQPQGPLGTDSLK 20 0 M0R201;M0QY29;Q05469-2;Q05469 M0R201 LIPE Hormone-sensitive lipase 1 S(0.064)VS(0.936)EAALAQPQGPLGTDSLK 135.09 4.9561e-17 1749900.0 793.14 852.68 1242.6 1332.7 1393.0 1183.0 1098.2 1470.7 1449.8 1102.2 1582.9 True False 873.6589889211923 924.5383360807201 1326.9303083608156 1415.0178522186986 1295.1604855891153 1173.3660402224004 1139.9926019580985 1441.3657347581698 1388.8699478153083 1032.6069038973708 1388.2133348298323 0.6293405826045358 0.6659915395453613 0.9558547487396606 1.0193086442237296 0.9329693449082712 0.8452346701929874 0.8211941013359011 1.0382883513612502 1.0004729914120558 0.7438387731839128 1.0 10.439013576966508 -5.755757030243292 4.750001619442027 0.9758163990703111 0.6387023805092471 0.5147314420133926 0.09709574702823145 0.06392090515927284 3.6955445458257596 0.010245836462155256 0.038698866662560824 1.754861999794487e-06 5.755757030243292 -0.33711401856106404 SVS(ph)EESANSLVSVGVEAK ddPTM_A549_MK2206_60min_R1 1 SVSEESANSLVSVGVEAK 18 0 Q8NEZ4;Q8NEZ4-3;C9J4Z5;H0YMU7 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 S(0.146)VS(0.845)EES(0.005)ANS(0.003)LVS(0.001)VGVEAK 59.513000000000005 0.0039878 2180500.0 1299.4 1602.5 1177.5 1129.2 1992.1 1570.2 841.44 1316.7 1616.4 1881.2 1945.3 True False 1518.706952720102 1684.0604051690862 1344.4872059348031 1405.8540506917143 1699.0647289189128 1736.3575217855953 994.3187562242215 1503.346257224634 1250.2879808603934 1456.2356134498589 1462.22832245127 1.0386250419319956 1.151708238249645 0.9194782957567895 0.9614463275714354 1.161969511075132 1.1874735943253902 0.6800023915262098 1.0281200508443402 0.8550566020800492 0.9959016598780107 1.0 10.513952885931548 -7.720171164950842 24.999999877525504 0.9214426436060548 1.0662137661068318 0.31090311049434816 0.1168711245577936 155.43460206564802 94160.85997725095 0.017784004993127954 0.026377791740049093 1.9047098822029388e-08 7.720171164950842 0.14477112250077706 SVS(ph)ENSLVAMDFSGQTGR ddPTM_A549_MK2206_60min_R1 3 SVSENSLVAMDFSGQTGR 18 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 S(0.02)VS(0.763)ENS(0.217)LVAMDFSGQTGR;S(0.039)VS(0.943)ENS(0.018)LVAMDFSGQTGR;S(0.174)VS(0.825)ENS(0.001)LVAMDFSGQTGR 185.85 9.156e-40 15675100.0 5527.5 7484.9 6871.0 6019.2 11112.3 8477.7 7093.200000000001 8219.0 13463.099999999999 11296.2 11169.099999999999 True False 6460.406865599787 7865.84943940723 7845.411118452677 7493.904270212152 9477.695390374793 9374.804586958187 8381.942624132025 9384.068419631858 10413.729346152912 8744.38057444838 8395.50421852181 0.769507905355715 0.9369120942198949 0.9344776578331603 0.8926091959645991 1.1289012718813836 1.1166458074401162 0.9983846599278855 1.117749235231056 1.240393557682763 1.0415551403281882 1.0 13.035401258033605 -6.365568099223607 0.8698217561121909 1.1121957220545624 0.8222520221274038 0.5850855015163956 0.08094024857280134 0.4898701875821752 0.5991014214727178 0.01646014657739308 0.09391860684254418 4.309549771316079e-07 6.365568099223607 -0.2899436999271586 SVS(ph)ENSLVAMDFSGQTGR ddPTM_A549_PD325901_60min_R1 5 SVSENSLVAMDFSGQTGR 18 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 S(0.047)VS(0.945)ENS(0.008)LVAMDFSGQTGR;S(0.068)VS(0.892)ENS(0.04)LVAMDFSGQTGR;S(0.015)VS(0.558)ENS(0.427)LVAMDFSGQTGR;S(0.001)VS(0.85)ENS(0.149)LVAMDFSGQTGR;S(0.001)VS(0.999)ENSLVAMDFSGQTGR 141.97 1.2137999999999999e-16 24852000.0 7910.0 8074.0 8668.0 8759.6 10435.6 9246.8 8963.7 8685.2 9723.8 9917.4 10337.5 True False 8713.017376965763 8754.424315705463 9256.262604918353 9300.660597504992 9702.63945686559 9171.49712656677 9304.818508624849 8511.966872592404 9315.142501425371 9291.213671485928 9066.053034811666 0.9610596081348385 0.9656268590190662 1.0209804166572072 1.0258775855151612 1.0702164899774544 1.0116306502234458 1.0263362096930577 0.9388834192683748 1.0274749624403536 1.024835574622131 1.0 13.146258885422274 -5.754734806238801 23.478780185224483 1.0141544674800442 0.963343161639458 0.31997968822931544 0.029618439420518103 66.23231024724146 231923.8860042088 0.004030175565278678 0.014882142139864133 1.7589973847724795e-06 5.754734806238801 -0.05081130584058624 SVS(ph)GKTPGDFYDRR ddPTM_A549_MK2206_60min_R1 1 SVSGKTPGDFYDRR 14 2 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;H0Y7U8;A0A2R8Y4Z5 Q3V6T2 CCDC88A Girdin 1 S(0.392)VS(0.593)GKT(0.015)PGDFYDRR 66.068 0.00090135 9328700.0 1096.6 1936.1 1695.4 1451.5 2173.8 934.51 1132.2 1263.6 2307.7 2290.7 2154.0 True False 1281.6792707040665 2034.6392202482803 1935.8332135387398 1807.11756516031 1854.0368996154464 1033.3992279224672 1337.9060845658196 1442.719169612704 1785.0096346396504 1773.2292790397553 1619.102352624293 0.7915986710949309 1.2566464479224997 1.1956212715033607 1.116123117375054 1.1451017266514152 0.6382544168671613 0.8263258233164188 0.8910611285780041 1.1024686807146253 1.095192824694281 1.0 10.660978474104953 SVS(ph)GKTPGDFYDRR ddPTM_A549_PD325901_60min_R1 1 SVSGKTPGDFYDRR 14 2 Q3V6T2;A0A2R8YCU9;Q3V6T2-3;Q3V6T2-2;Q3V6T2-4;A0A2R8Y7B1;A0A2R8Y5D7;H7C2C6;H0Y470;A0A2R8Y820;A0A2R8Y885;H0Y7K3;H0Y7U8;A0A2R8Y4Z5 Q3V6T2 CCDC88A Girdin 1 S(0.161)VS(0.833)GKT(0.006)PGDFYDRR 70.96 0.00043326 7840000.0 1436.1 1510.2 1607.1 1822.4 2126.7 2355.1 1803.7 2026.6 2112.3 2281.9 2551.7 True False 1581.8918147990557 1637.46985404736 1716.1674702773735 1934.9655090293056 1977.3279287167045 2335.9208464309163 1872.340790522511 1986.1778731630557 2023.527376721117 2137.8204445685087 2237.8570765590252 0.7068779464823576 0.7317133302208768 0.7668798370788664 0.8646510669951042 0.883580971022995 1.0438203900057264 0.8366668319146907 0.8875356223450352 0.9042254744134661 0.9552980245975606 1.0 11.12790218445994 -3.534928353036068 0.271638999289952 0.9699398924982413 5.698196693658256e-17 0.6959688251958636 0.05602085822259571 8.70721810377885 0.2232825041378991 0.02512393272726793 3.3937747305684396 0.0002917908351064964 3.534928353036068 -0.9699398924982412 SVS(ph)GSPEPAAK ddPTM_A549_PD325901_60min_R1 1 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.084)VS(0.901)GS(0.016)PEPAAK 128.28 1.1357000000000002e-07 8337900.0 4570.6 4196.4 4405.2 4400.1 4966.2 4899.0 3864.6 4262.5 4832.9 4771.2 5417.6 True False 5034.603947302116 4550.0453552670815 4704.163362619558 4671.884183647852 4617.391244459913 4859.1041682582745 4011.6694677902647 4177.481093633436 4629.790019862465 4469.945617741912 4751.269544995959 1.0596334094756978 0.9576483321303446 0.9900855588321623 0.9832917580035602 0.9718226256649558 1.0226959599410408 0.84433632522814 0.8792347085492471 0.9744321967038395 0.9407897353349828 1.0 12.214097339484555 -5.255604195361314 23.670863939574527 0.9715405038825033 1.0596334927350568 0.1991504610276853 0.05201148683937277 411.87602308867366 1670693.7127031332 0.007364956453127041 0.08859803492702945 5.551314147419059e-06 5.255604195361314 0.08809298885255346 SVS(ph)GSPESDELQELR ddPTM_A549_PD325901_60min_R1 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 S(0.002)VS(0.534)GS(0.452)PES(0.011)DELQELR 92.46799999999999 2.6989000000000002e-05 10764000.0 420.55 295.7 477.38 519.44 656.76 599.9 756.31 654.56 339.33 560.9 524.12 True False 463.24392640745293 320.6196767592401 509.7778775191419 551.5246290661672 610.6314432990004 595.0146132962113 785.0917909187121 641.5042873076137 325.0691401518614 525.4846782762069 459.65656267042266 1.0078044436398104 0.6975200678014184 1.1090407902751007 1.199862405666586 1.3284514850641387 1.2944764887928761 1.7079964797144191 1.395616508944695 0.7072000414033869 1.1432115212787324 1.0 8.844412528366096 -8.763625436770312 24.99997792669129 0.8617333506406566 1.2186551258930296 0.15211643791073104 0.25923156839093126 59.21801123533017 677221.4463549147 0.048258962139941367 0.05260500278546418 1.7233542647283596e-09 8.763625436770312 0.356921775252373 SVS(ph)HGSNHTQKPDEQR ddPTM_A549_MK2206_60min_R1 1 SVSHGSNHTQKPDEQR 16 1 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.289)VS(0.68)HGS(0.03)NHT(0.001)QKPDEQR 40.801 0.041608 3578200.0 263.53 406.86 221.52 306.56 334.19 204.81 285.28 326.55 476.71 624.98 583.18 True False 308.007421310088 427.56743616043326 252.93486697127605 381.6672137620016 285.0310936988162 226.4828582581251 337.11168327586756 372.8394625174332 368.7359461494423 483.7965839325391 438.3603110508053 0.7026352832256987 0.9753789870608949 0.5770022070770027 0.8706700952170986 0.6502210316795344 0.5166591330205441 0.769028752780488 0.8505319781886497 0.8411709200258926 1.1036505170206155 1.0 8.775973373013384 -9.355533753501676 0.6949909563393641 0.9763421167651553 0.7279166436248182 0.4471861291366519 0.12971220597899624 0.45273365732425663 0.4798415662743667 0.044007431693436974 0.029989881700527996 4.410280849500078e-10 9.355533753501676 -0.24842547314033703 SVS(ph)ISVPSTPR ddPTM_A549_PD325901_60min_R1 2 SVSISVPSTPR 11 0 Q96K30;Q96K30-3 Q96K30 RITA1 RBPJ-interacting and tubulin-associated protein 1 1 S(0.011)VS(0.9)IS(0.089)VPSTPR;S(0.055)VS(0.944)IS(0.001)VPSTPR 151.1 7.6168e-12 11128400.0 3776.1 4588.4 4220.0 4701.1 5281.9 4402.3 4634.9 4910.9 5466.3 5546.3 5294.6 True False 4159.446892182103 4975.080570991201 4506.394576921486 4991.476270027254 4910.91756556579 4366.4491283779125 4811.283655814597 4812.9482469734785 5236.570420570302 5196.10567146252 4643.397765234713 0.8957765633011309 1.0714310559908973 0.9704950565857238 1.074962026169418 1.0576129407508457 0.940356469365962 1.036155827923434 1.036514313507276 1.1277453893303508 1.1190309196351755 1.0 12.180965155778155 -8.223098971885221 3.1521459000016723 1.0606533498321904 1.0086877130654892 0.20145744353208328 0.06176705477214975 0.4387153360503544 8.846819060906826 0.010840990139506207 0.013935361038074587 5.9827523786917705e-09 8.223098971885221 -0.051965636766701184 SVS(ph)KEREHAK ddPTM_A549_MK2206_60min_R1 1 SVSKEREHAK 10 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 S(0.156)VS(0.844)KEREHAK 49.423 0.0059978 13207000.0 1976.0 2089.0 2543.6 2352.3 1765.5 1358.6 1574.8 1256.1 2472.0 3640.3 3583.5 True False 2309.500491438296 2195.3211771595757 2904.3207278265513 2928.6136055987613 1505.7972887437084 1502.3661502343086 1860.9207754586232 1434.156021644916 1912.0959469728366 2817.9537017018483 2693.6180504313634 0.8573971692343116 0.815008340476487 1.0782229230166636 1.087241602472097 0.5590240563254935 0.5577502534161128 0.6908628991258097 0.5324273875485971 0.7098615732347904 1.046159347369451 1.0 11.395329578738234 -3.45838958049619 17.68522144148381 0.8181154364031498 0.9250365945199966 0.0 0.20696325241967756 0.0 0.0 0.028662800931092722 0.0 0.0003480249818585655 3.45838958049619 0.10692115811684688 SVS(ph)KEREHAK ddPTM_A549_PD325901_60min_R1 1 SVSKEREHAK 10 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 S(0.03)VS(0.97)KEREHAK 66.00399999999999 0.0010856 39010000.0 4431.8 3783.0 4276.4 4520.9 5469.2 5051.4 5222.1 6240.1 5000.6 5146.6 5765.3 True False 4881.713073481274 4101.806686439653 4566.622220082235 4800.145725291145 5085.062259715709 5010.263073186333 5420.829873142767 6115.63631023625 4790.442172054929 4821.6427976757495 5056.204649247856 0.9654896136784062 0.8112422203974328 0.9031719514678961 0.9493574841764363 1.0057073659928195 0.9909138218785593 1.0721144117355201 1.2095310088261542 0.9474383464220617 0.9536091064654595 1.0 12.30383914225936 -6.451747354321319 2.3287920943984886 1.003164441935382 0.8834979691889331 0.34402290377034916 0.07705443052738586 0.3075707826235239 3.2592103332403233 0.011870220110726765 0.03155689112838382 3.5338868969766814e-07 6.451747354321319 -0.11966647274644893 SVS(ph)KESVASMGADSGDDFASDGSSSR ddPTM_A549_MK2206_60min_R1 3 SVSKESVASMGADSGDDFASDGSSSR 26 1 Q5T165;Q92805 Q5T165 GOLGA1 Golgin subfamily A member 1 1 S(0.165)VS(0.813)KES(0.021)VAS(0.001)MGADSGDDFASDGSSSR;S(0.039)VS(0.96)KESVASMGADSGDDFASDGSSSR;S(0.387)VS(0.61)KES(0.003)VASMGADSGDDFASDGSSSR 158.1 4.1734999999999997e-41 59218000.0 8447.6 10159.4 8414.6 6921.200000000001 12349.400000000001 8269.5 8392.8 9469.8 13166.199999999999 12887.7 12847.0 True False 9873.348356009188 10676.470065694111 9607.916809391922 8616.894310704476 10532.819619151262 9144.573001150162 9917.663121837144 10812.173150046194 10184.076722101041 9976.359619103618 9656.73534083765 1.022431288372945 1.1055982885379572 0.9949446132960403 0.8923196097405963 1.0907226145681672 0.9469632001281438 1.0270202891339528 1.119650976072864 1.0546086604479366 1.0330985852863026 1.0 13.237319823243336 -7.986795244695355 24.976432713524858 1.0354423875767031 1.0090211501088573 0.07325005593797018 0.06220989469507722 734.7801776651793 1389813.3296260359 0.00992735244221769 0.013712396939782578 1.0308720275274845e-08 7.986795244695355 -0.02642123746784586 SVS(ph)KESVASMGADSGDDFASDGSSSR ddPTM_A549_PD325901_60min_R1 2 SVSKESVASMGADSGDDFASDGSSSR 26 1 Q5T165;Q92805 Q5T165 GOLGA1 Golgin subfamily A member 1 1 S(0.166)VS(0.819)KES(0.014)VASMGADSGDDFASDGSSSR;S(0.166)VS(0.831)KES(0.003)VASMGADSGDDFASDGSSSR 160.52 3.0901e-41 41888000.0 6700.3 6626.9 6737.5 7124.4 7800.2 8217.7 7415.1 7748.6 7582.7 9064.6 9553.7 True False 7380.509523499838 7185.372120107574 7194.747265878798 7564.458007313643 7252.34086122916 8150.777775769754 7697.285688198416 7594.048094340893 7264.025488549549 8492.259609025687 8378.655465894104 0.8808703918597336 0.8575805687864989 0.8586995007928795 0.9028248074055906 0.8655733477465822 0.9728025945150816 0.9186779095441684 0.9063564106738832 0.8669679184349167 1.0135587557686332 1.0 13.032503035947583 -10.86259105876674 0.8914801130887163 1.0064694827145941 0.8913850679504283 0.6442791356283964 0.0325969244560627 0.39099993907058433 0.49850695669148865 0.03160673282953747 0.006129681171157045 1.3721732265166065e-11 10.86259105876674 -0.11508441476416587 SVS(ph)LQEPR ddPTM_A549_PD325901_60min_R1 2 SVSLQEPR 8 0 Q6PJF5-2;Q6PJF5;K7EPV3;K7EKI1;K7EKA3;K7EIY3;K7EQ53 Q6PJF5-2 RHBDF2 Inactive rhomboid protein 2 1 S(0.064)VS(0.936)LQEPR;S(0.138)VS(0.862)LQEPR 86.87899999999999 0.0042439999999999995 10363000.0 3203.1 3767.6 3041.9 3723.9 4422.6 3433.2 3550.8 3682.4 3563.6 3718.1 4205.2 True False 3528.276354002409 4085.108874393349 3248.34162643068 3953.916845409477 4111.971833141723 3405.2411574738317 3685.927637072317 3608.9516432130854 3413.8342847528165 3483.3385314650855 3687.98705895913 0.9566943423598139 1.1076798288837542 0.8807898657180939 1.0721070280884881 1.1149637369666519 0.9233332717916047 0.9994415864660343 0.9785694975382178 0.9256633036332594 0.9445094236442892 1.0 11.848617878062678 -7.2987663089157495 24.99996191581707 0.9654996617196349 1.025404604154934 0.18727328206052307 0.06669086148520025 786.1214415142986 526508.1885538204 0.009678053246237685 0.015471821775100519 5.0261296959668395e-08 7.2987663089157495 0.0599049424352992 SVS(ph)LRK ddPTM_A549_MK2206_60min_R1 2 SVSLRK 6 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.001)VS(0.999)LRK;SVS(1)LRK 71.342 0.020758000000000002 170208000.0 11855.8 14474.1 14067.7 12175.1 16973.6 11042.900000000001 11078.3 11864.2 16825.0 16602.1 18159.6 True False 13856.769193519303 15210.769866120358 16062.71139441956 15158.000046561016 14476.805924791952 12211.452348316245 13091.083710162096 13545.986682588671 13014.164364004037 12851.674079340793 13650.07014053673 1.015142709953463 1.114336388715601 1.176749366782958 1.1104704877336984 1.0605664129006969 0.8946072967091788 0.9590488235870226 0.9923748774272623 0.9534137356082707 0.941509746618449 1.0 13.736620743965238 -7.041220676913044 5.57083017868125 0.9718448912774893 1.107772899644632 0.7041481513992578 0.04476884434554103 0.08897381862475133 7.1226236044730245 0.006629952765244552 0.01182055974052318 9.094510382407073e-08 7.041220676913044 0.1359280083671428 SVS(ph)LRK ddPTM_A549_PD325901_60min_R1 2 SVSLRK 6 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.014)VS(0.986)LRK;S(0.006)VS(0.994)LRK 77.923 0.018543 320820000.0 12876.5 11725.5 14905.5 12887.8 15042.2 14359.6 16176.400000000001 15574.3 14420.0 14324.4 15868.900000000001 True False 14183.71280082171 12713.649035645822 15917.076864052897 13683.850135682549 13985.687764772862 14242.660178510203 16792.001754065743 15263.658368698014 13813.977546900773 13419.954939382607 13917.125901245268 1.0191553127756492 0.9135254739995013 1.1437043091367505 0.9832382226604814 1.0049264384050343 1.0233909127196879 1.2065710889748607 1.0967536312459645 0.992588386777814 0.9642763193068351 1.0 13.76457368296717 -2.0003186435529727 13.644526238240992 1.02077201944282 0.0001278392463235356 0.0 0.08146140619260604 0.0 0.0 0.01045368923217732 0.0 0.009992665651998332 2.0003186435529727 -1.0206441801964965 SVS(ph)NGALR ddPTM_A549_MK2206_60min_R1 1 SVSNGALR 8 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 S(0.396)VS(0.604)NGALR 89.31700000000001 0.0026634000000000002 31636000.0 2543.5 3054.0 2476.2 2703.9 3458.4 2677.8 2351.9 2651.5 3322.0 3845.7 4026.0 True False 2972.7806173953977 3209.4355553113196 2827.362394340348 3366.3556213826855 2949.6739413147766 2961.16301862022 2779.2097865132937 3027.358244878191 2569.5723041439182 2976.9536990453516 3026.233088052647 0.9823369617931031 1.0605381217930445 0.9342844097180002 1.112391386728543 0.9747015036481755 0.9784979981583973 0.918372678391964 1.0003718011114167 0.8490992694146419 0.9837159308045877 1.0 11.563307396482084 -7.395445774200477 1.9303862650197214 0.932632608700496 1.0187713439831778 0.1747091053770501 0.05993721007547602 0.3672621293601132 2.6848911369021975 0.010606937671073407 0.01858647266714405 4.023038843318164e-08 7.395445774200477 0.08613873528268179 SVS(ph)NGALR ddPTM_A549_PD325901_60min_R1 1 SVSNGALR 8 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 S(0.457)VS(0.543)NGALR 55.801 0.02011 28391000.0 3222.3 3063.0 3230.8 3289.1 3920.6 3855.2 3343.3 3570.5 3481.8 3699.4 4249.8 True False 3549.425523868118 3321.129759599435 3450.0615163786583 3492.2602369119218 3645.2305813357366 3823.804529387487 3470.531111023958 3499.2835764969377 3335.472054285655 3465.8192526564485 3727.1015417018284 0.9523286350410024 0.8910757387315444 0.9256687744555865 0.9369909024043719 0.9780336115208954 1.0259458956520684 0.931160869161424 0.9388752995710262 0.894923848187578 0.9298966539757658 1.0 11.863838409259868 -5.313398725250175 0.005504886791507982 1.8548851954263408 2.912323296587025e-06 0.01690795356953545 0.03900565653497601 33508.54918387513 27.474520635203014 4438.339728132224 4825.631876448876 4.859608407461307e-06 5.313398725250175 -1.8548822831030443 SVS(ph)PER ddPTM_A549_MK2206_60min_R1 2 SVSPER 6 0 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966-3 ZNF638 Zinc finger protein 638 1 S(0.003)VS(0.997)PER;SVS(1)PER 147.08 0.005161 313110000.0 13502.9 12541.6 8994.3 6281.700000000001 6039.8 4772.9 4707.6 5399.8 4974.700000000001 18610.8 19879.8 True False 15781.85940579057 13179.913870495235 10269.826986275497 7820.716781996226 5151.353420874678 5277.965110005394 5562.90998383859 6165.238186193952 3847.9383929635 14406.607354238055 14943.097005431944 1.0561304259788804 0.8820068467536698 0.6872622845546895 0.5233665269758557 0.3447313109860772 0.3532042325688449 0.3722728950910527 0.41258101877762254 0.2575060840175729 0.9640978271774003 1.0 13.867191561902768 -5.708181415907133 1.9828201277346686 0.5566424783425331 1.0488909141715805 0.3491761331634027 0.23307553832910569 0.4442373274658134 3.1028248025319627 0.04262212504016645 0.2870658201021442 1.9580265848913014e-06 5.708181415907133 0.4922484358290474 SVS(ph)PER ddPTM_A549_PD325901_60min_R1 2 SVSPER 6 0 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966-3 ZNF638 Zinc finger protein 638 1 S(0.001)VS(0.999)PER;SVS(1)PER 107.29 0.026774 540770000.0 8547.9 8096.3 7173.4 7176.0 6736.4 6663.2 5737.8 6588.4 7452.2 8726.4 10449.4 True False 9415.676515368603 8778.603614967324 7660.230061158432 7619.24522212154 6263.258503318388 6608.9371083769165 5956.155118844638 6456.989193500182 7139.009949723577 8175.4136147432555 9164.19004420421 1.0274423020421148 0.9579246581119577 0.8358872987365709 0.8314150170794686 0.6834492162544704 0.7211698007677902 0.6499379748908135 0.7045891848984334 0.7790115564264803 0.8921043294943131 1.0 13.16179166178875 -5.630100120435026 2.7536972861845963 0.8310418397963075 1.021448421904707 0.31478215201989757 0.10351345494588156 0.3778809301852178 5.360867990778117 0.01939685834033689 0.11184386755466134 2.3436884488942154e-06 5.630100120435026 0.19040658210839956 SVS(ph)PLRPETEARPPSR ddPTM_A549_MK2206_60min_R1 1 SVSPLRPETEARPPSR 16 2 Q8N3V7-2 Q8N3V7-2 SYNPO Synaptopodin 1 S(0.27)VS(0.723)PLRPET(0.007)EARPPSR 49.973 0.0044851000000000005 5153800.0 1341.3 1494.1 1588.5 1432.4 2216.1 1676.8 1280.6 1453.1 2196.8 2200.4 2461.4 True False 1567.6786483634546 1570.1433081829218 1813.773186095486 1783.3380643028806 1890.1146256499187 1854.2378630302435 1513.2684436451066 1659.0813749321148 1699.228307568741 1703.3281117558297 1850.1664488158933 0.847317628836459 0.8486497575327958 0.9803297358766293 0.9638797987306587 1.0215916664468714 1.002200566450092 0.8179093532982389 0.8967200632104896 0.9184191555609752 0.9206350665616923 1.0 10.853439352203216 SVS(ph)PPPKR ddPTM_A549_MK2206_60min_R1 1 SVSPPPKR 8 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.057)VS(0.943)PPPKR 77.192 0.0018875 43284000.0 9405.8 10359.0 9080.7 8465.1 12542.0 9512.2 8716.5 8839.0 12637.0 13423.0 14581.0 True False 10993.269090268386 10886.228853133578 10368.479805462563 10539.049880012779 10697.088414286934 10518.77469031267 10300.175221796482 10091.955318302224 9774.739677142283 10390.734977321621 10960.13528487224 1.0030231201107416 0.9932567956674155 0.9460175021537999 0.9615802730609845 0.9759996693701056 0.9597303698277557 0.9397854090371796 0.9207874771611329 0.8918448014627973 0.948048058463609 1.0 13.419977985658996 -7.506637263401222 3.2623634054322066 0.9444900546910332 0.9743848167895451 0.2648073661651916 0.027974864007569843 0.4772052114244735 10.496935074743297 0.006491413501489805 0.010318968799078395 3.114316427495979e-08 7.506637263401222 0.02989476209851194 SVS(ph)PQNSDSSGFADVNGWHLR ddPTM_A549_PD325901_60min_R1 2 SVSPQNSDSSGFADVNGWHLR 21 0 S4R3E2;Q9UKB3 S4R3E2 DNAJC12 DnaJ homolog subfamily C member 12 1 S(0.173)VS(0.815)PQNS(0.009)DS(0.002)S(0.001)GFADVNGWHLR;S(0.161)VS(0.838)PQNS(0.001)DSSGFADVNGWHLR 105.79 2.4608e-10 12253100.0 3253.6000000000004 4405.0 3849.8 4323.0 4067.5 3414.5 3605.9 4071.7000000000003 4194.4 3743.2 4172.9 True False 3583.9030768262746 4776.224809348845 4111.070578728045 4590.02189175466 3781.8128321132244 3386.693444073868 3743.124497724193 3990.486749313145 4018.123954418905 3506.853713181492 3659.6597541925635 0.9792995298867604 1.3051007826279826 1.1233477576756523 1.2542209385712044 1.0333782608562778 0.925412107011866 1.0228066949218466 1.0903982931040463 1.097950144085302 0.9582458339642054 1.0 11.837493809194086 -6.78426782248783 24.705454538374305 1.0388020116994783 1.1724539656387938 0.3629058421729944 0.09110393437982331 167.50135488429964 181273.33979110784 0.012240083323644017 0.023143008330187727 1.643357977983675e-07 6.78426782248783 0.1336519539393155 SVS(ph)PQTLEAYIR ddPTM_A549_PD325901_60min_R1 2 SVSPQTLEAYIR 12 0 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0 A0A2R8Y7K2 SPAST Spastin 1 S(0.001)VS(0.94)PQT(0.059)LEAYIR;S(0.01)VS(0.495)PQT(0.495)LEAYIR 88.101 0.00027866 1624200.0 768.64 981.25 799.99 772.13 1019.1 848.69 1023.7 872.43 863.05 908.17 1147.2 True False 846.6717669571389 1063.9433811971742 854.2821321306683 819.822716465539 947.5219317041398 841.7785500222728 1062.6574636901344 855.0286992419045 826.7790098372204 850.8279912107378 1006.1016726999704 0.8415369837175739 1.0574909177339702 0.8491011945523559 0.814850763805477 0.9417755256895396 0.8366734425192628 1.0562127988897891 0.8498432339818628 0.82176486956679 0.8456680018506074 1.0 9.974560390290817 SVS(ph)PSPVPLLFQPDQNAPPIR ddPTM_A549_MK2206_60min_R1 2 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 1 SVS(1)PSPVPLLFQPDQNAPPIR;SVS(1)PSPVPLLFQPDQNAPPIR 515.4 0.0 267430000.0 49171.0 55078.0 53102.0 49104.0 75588.0 54700.0 50753.0 54295.0 80402.0 79955.0 80785.0 True False 57469.86268446989 57881.23494284116 60632.662088789744 61134.48220436234 64469.10533081813 60488.317693078636 59974.16314252701 61991.48252146384 62191.07537561085 61893.10996884081 60723.85494742505 0.946413279167265 0.953187754515173 0.9984982366696867 1.0067622066697317 1.0616767559740028 0.9961211742148067 0.9876540808295665 1.020875281635797 1.0241621753008952 1.0192552831573045 1.0 15.889975760174334 -5.808935683198045 2.6776778179574268 1.0127405943945549 0.9460248059744728 0.6420791111073082 0.018442721607093347 0.1325352610416034 1.8670517168053604 0.002654000973820479 0.011861904119118817 1.5526169275960887e-06 5.808935683198045 -0.06671578842008208 SVS(ph)PSPVPLLFQPDQNAPPIR ddPTM_A549_PD325901_60min_R1 2 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 1 SVS(1)PSPVPLLFQPDQNAPPIR;S(0.008)VS(0.992)PSPVPLLFQPDQNAPPIR 491.84 0.0 293670000.0 61649.0 65695.0 64734.0 64096.0 70051.0 69720.0 70769.0 72636.0 68623.0 73056.0 77738.0 True False 67907.561096405 71231.3482066225 69127.23851716472 68055.06434742227 65130.859422830676 69152.22343559239 73462.15302128256 71187.21799816017 65739.01395291065 68443.23169218504 68176.71882178371 0.9960520580921135 1.0448045819398215 1.013941998262863 0.9982156009197297 0.9553240541406075 1.014308471141867 1.077525499772366 1.0441572904710479 0.9642443210673529 1.0039091478001165 1.0 16.056991547325186 -8.768926446195291 24.99883894163792 0.9831153747290667 1.017903629473463 0.13362720034782216 0.03140817449141779 216.90726950753844 724238.913447296 0.005885496847482496 0.006323702520872871 1.7024468170024186e-09 8.768926446195291 0.034788254744396174 SVS(ph)PTFLNPSDENLK ddPTM_A549_MK2206_60min_R1 4 SVSPTFLNPSDENLK 15 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 SVS(0.99)PT(0.01)FLNPSDENLK;SVS(0.999)PT(0.001)FLNPSDENLK;S(0.002)VS(0.499)PT(0.499)FLNPSDENLK;S(0.012)VS(0.819)PT(0.169)FLNPSDENLK 260.18 1.8267999999999996e-77 46525400.0 8441.3 9666.3 8505.9 7557.700000000001 11460.099999999999 9411.3 8813.199999999999 8574.6 13817.599999999999 12566.0 13019.199999999999 True False 9865.985070029401 10158.2733818945 9712.164522259742 9409.336839278047 9774.334471102671 10407.19751928467 10414.444360091398 9790.075808611185 10687.935662173084 9727.33187253398 9786.173328359422 1.0081555618311697 1.0380230393484617 0.9924374110680004 0.9614929680440731 0.9987902465182746 1.063459349235679 1.0641998675734983 1.000398774896052 1.0921465728795583 0.993987286567373 1.0 13.256529120033704 -7.244141523923736 22.84751304144435 1.0439043933962475 0.9993694927656438 0.19957825884763802 0.03369377548248561 312.5902427531172 412876.7304846037 0.005717108486680087 0.009880725743821405 5.69978502619355e-08 7.244141523923736 -0.044534900630603724 SVS(ph)PTFLNPSDENLK ddPTM_A549_PD325901_60min_R1 2 SVSPTFLNPSDENLK 15 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.009)VS(0.987)PT(0.003)FLNPSDENLK;SVS(0.977)PT(0.023)FLNPSDENLK 268.92 1.0103999999999999e-90 83334000.0 6179.6 5806.200000000001 5927.5 6495.8 7731.200000000001 6301.3 7030.4 7803.3 7445.7 7590.0 6971.3 True False 6806.948442818921 6295.508850860676 6329.775794953107 6897.030812967829 7188.18718319208 6249.984301989355 7297.945719182497 7647.657059929578 7132.783122119223 7110.766104682494 6113.874294711742 1.1133608763769745 1.0297085853247 1.0353133692048775 1.1280949657295842 1.175717202659789 1.022262480501986 1.1936695730716822 1.2508692019632295 1.1666551810345196 1.163054024652261 1.0 12.577871174430255 -4.857791344820048 18.915687399733887 1.0978135764441923 8.742978233434535 0.0 0.08113728390983567 4994.734935629928 671315.3704741895 0.012386831958278208 17353.624186631117 1.3874222506656147e-05 4.857791344820048 7.645164656990342 SVS(ph)PTTEMVSNESVDYR ddPTM_A549_MK2206_60min_R1 4 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 S(0.016)VS(0.948)PT(0.034)T(0.002)EMVSNESVDYR;S(0.018)VS(0.978)PT(0.004)TEMVSNESVDYR;S(0.019)VS(0.963)PT(0.019)TEMVSNESVDYR;S(0.123)VS(0.875)PT(0.003)TEMVSNESVDYR 241.68 4.177399999999999e-74 58387000.0 7641.4 8459.2 6553.3 7213.1 11250.3 8165.800000000001 7155.700000000001 7451.6 11575.8 11496.0 11927.8 True False 8931.081505706772 8889.737147835473 7482.656481233581 8980.309823808362 9595.395773182296 9029.899535980656 8455.79806511892 8507.887119567918 8953.899782754113 8899.045615681247 8965.798069467051 0.9961278891749183 0.9915165475463246 0.8345778505446942 1.0016185680548317 1.0702221596825088 1.0071495550108251 0.9431171658789714 0.948926916895603 0.9986729249732428 0.9925547672088301 1.0 13.13021629158369 SVS(ph)PTTEMVSNESVDYR ddPTM_A549_PD325901_60min_R1 6 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 S(0.101)VS(0.642)PT(0.128)T(0.128)EMVS(0.001)NESVDYR;S(0.165)VS(0.332)PT(0.252)T(0.252)EMVSNESVDYR;S(0.023)VS(0.963)PT(0.007)T(0.007)EMVSNESVDYR;S(0.027)VS(0.972)PT(0.001)TEMVSNESVDYR;S(0.002)VS(0.84)PT(0.158)TEMVSNESVDYR;S(0.001)VS(0.972)PT(0.028)TEMVSNESVDYR 311.92 4.120999999999999e-152 109557500.0 16086.950000000003 16219.03 15879.560000000001 15585.550000000001 18110.59 17619.54 15604.71 17115.3 16643.39 16796.59 18584.67 True False 17720.085321413346 17585.864578790744 16957.242433151514 16548.23402614777 16838.564636543695 17476.05230797987 16198.555778274951 16773.9219148069 15943.926197247782 15736.050440876012 16298.873407929703 1.0871969416482612 1.0789619710915048 1.0403935295860083 1.0152992548611826 1.033112179910019 1.0722245562983175 0.9938451187917108 1.0291460946402637 0.9782225923351713 0.965468596941193 1.0 13.992484627136864 -4.974722264048612 0.2812327498876102 0.9871200205440864 1.1851399417543769 0.6501650307546348 0.023059646845180568 4.450416310656918 0.225368021994302 0.010346388184768783 0.31192041639077983 1.0599313458774617e-05 4.974722264048612 0.19801992121029044 SVS(ph)PYSR ddPTM_A549_MK2206_60min_R1 2 SVSPYSR 7 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.034)VS(0.961)PYS(0.005)R;S(0.28)VS(0.499)PY(0.018)S(0.203)R 76.825 0.017504 20313900.0 5240.8 6532.8 5627.6 5043.200000000001 7348.4 5126.3 5976.0 5142.7 7834.1 7510.8 8495.9 True False 6125.318914741813 6865.291616155137 6425.678301587004 6278.784226397851 6267.460094366619 5668.761663437461 7061.761845403059 5871.693473858225 6059.688858487016 5814.105063522852 6386.133555088545 0.9591592255162106 1.0750310116337596 1.0061922830390775 0.9831902468426835 0.9814170092594814 0.8876672582145617 1.1057961416695028 0.9194442025377925 0.9488822628300008 0.9104264753263899 1.0 12.64072700939113 -6.228048467072635 3.3874893141342435 0.9748956554660781 1.0213967645140556 0.09477207729590642 0.06043911020915916 0.4146467975480583 9.845919742216296 0.007505164122627983 0.02098168450188136 5.914956198416618e-07 6.228048467072635 0.04650110904797744 SVS(ph)PYSR ddPTM_A549_PD325901_60min_R1 2 SVSPYSR 7 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.068)VS(0.932)PYSR;S(0.025)VS(0.971)PY(0.002)S(0.001)R 125.98 0.0059363 27046000.0 10972.8 13165.9 10654.3 10713.5 12956.4 12253.3 11001.8 11303.5 13260.1 13284.9 12495.9 True False 12086.750578251576 14275.436598730072 11377.364867510563 11375.248562876135 12046.387161153489 12153.513187368671 11420.479519415967 11078.042825075794 12702.824110239877 12446.089146784776 10958.983518036577 1.1029079985711168 1.3026241507923788 1.038177021508008 1.0379839101094055 1.09922486344899 1.1090000425099742 1.0421112049872006 1.0108640830459563 1.15912430102055 1.1356974053570463 1.0 13.41982636931725 -11.028227521663474 1.2808672006873814 0.999241426954368 1.1051977657755556 0.0 0.08579229246527781 0.6202085182452682 1.7910621883281401 0.05778531936837253 0.01260778755372611 9.37070958088488e-12 11.028227521663474 0.1059563388211876 SVS(ph)QERLEDSVLMK ddPTM_A549_MK2206_60min_R1 2 SVSQERLEDSVLMK 14 1 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 S(0.047)VS(0.952)QERLEDS(0.001)VLMK;S(0.179)VS(0.817)QERLEDS(0.003)VLMK 60.763999999999996 0.0015603 23341000.0 5890.8 7052.9 5934.7 5868.7 7501.200000000001 5753.1 5460.299999999999 5490.4 9006.5 9879.599999999999 9822.2 True False 6885.02302376757 7411.862484628419 6776.329699415095 7306.53176345595 6397.7834167795545 6361.889223401294 6452.365830731978 6268.681013644813 6966.542130425105 7647.791498319805 7383.076661070717 0.9325411803009888 1.0038988926810801 0.9178192250319084 0.9896323848269961 0.8665470657393564 0.8616853806958402 0.8739399747470908 0.8490608050568053 0.9435825266664365 1.0358542717895467 1.0 12.850006423264967 -9.656532228809878 1.253920566402854 0.9879869140132774 0.9144362621573803 0.35327780009323073 0.05066923309910893 0.3923730921411566 1.2591526153354629 0.014048312934439802 0.010030758297337048 2.2053004759043425e-10 9.656532228809878 -0.07355065185589715 SVS(ph)QERLEDSVLMK ddPTM_A549_PD325901_60min_R1 2 SVSQERLEDSVLMK 14 1 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 S(0.044)VS(0.954)QERLEDS(0.002)VLMK;S(0.117)VS(0.883)QERLEDSVLMK 94.973 1.178e-05 25036000.0 4812.7 5806.4 5693.3 6334.4 6382.8 6579.799999999999 6884.200000000001 7221.0 6930.0 6980.5 7356.5 True False 5301.281761077518 6295.72570556257 6079.681574594096 6725.661501533818 5934.494147464608 6526.216290325735 7146.181998178786 7076.971490235084 6638.756199724161 6539.750038700419 6451.697136695721 0.8216879448548641 0.9758247438110473 0.9423383407157027 1.0424639221329615 0.9198345833239157 1.0115503180095307 1.1076437481128802 1.0969162594417134 1.0289937762212198 1.0136480216195942 1.0 12.655463000024419 -4.025113643106316 0.6723192423968739 1.0236754932095136 1.1236686138716345e-17 0.5830257072510203 0.049993992890231584 7.544324832892207 0.6714909082337577 0.00840687892636906 8.689408585566051 9.438138734357727e-05 4.025113643106316 -1.0236754932095136 SVS(ph)SQR ddPTM_A549_PD325901_60min_R1 1 SVSSQR 6 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.007)VS(0.96)S(0.034)QR 75.243 0.045908 7140000.0 2730.8 2544.0 2068.6 1905.0 2416.9 1478.9 1447.7 1584.8 1988.7 2734.7 2705.5 True False 3008.028805691292 2758.3918081687757 2208.9876355023193 2022.6675234310958 2247.1452818523567 1466.856328727732 1502.7930157118367 1553.1899207484514 1905.1218548905397 2562.0305752931795 2372.740651577555 1.2677444556325004 1.1625340537470095 0.9309857080391984 0.8524604330803253 0.9470673840220615 0.6182118251113828 0.6333574698577699 0.6545974250138918 0.8029203923420322 1.0797769126557393 1.0 11.212338702458727 -5.719614004870264 1.8533603668202474 0.8459370080777343 1.282166871454549 0.5244828949715248 0.14281850963403003 0.28102686881489203 1.6790075341547799 0.022040902199233093 0.15546722478916356 1.9071550188010327e-06 5.719614004870264 0.4362298633768148 SVS(ph)SSSY(ph)RR ddPTM_A549_MK2206_60min_R1 1 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 2 S(0.275)VS(0.161)S(0.264)S(0.26)S(0.342)Y(0.699)RR 45.137 0.025596999999999998 27916000.0 1070.2 925.16 1141.0 812.22 1398.8 1068.1 908.54 1165.0 1725.8 1415.0 1443.5 True False 1250.823596122097 972.2466923221415 1302.8109570884155 1011.2139364619413 1193.0383729791556 1181.1256330526007 1073.609957667753 1330.1423176628682 1334.9090555362943 1095.3505172398193 1085.0391114267259 1.1527912523608295 0.8960476005733353 1.2007041436279102 0.9319608167232688 1.099534901935858 1.0885558139001368 0.9894665974354191 1.225893429697529 1.2302865781317436 1.00950325726004 1.0 10.083531331796728 -8.235233473210007 24.895190245713795 1.120570986489426 1.0497687263620397 0.07692814021078487 0.10809307039949209 1526.510849579474 1450162.8344880214 0.01848058331779158 0.02385341819816553 5.817903678771625e-09 8.235233473210007 -0.07080226012738633 SVS(ph)TMNLSK ddPTM_A549_MK2206_60min_R1 3 SVSTMNLSK 9 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 S(0.005)VS(0.847)T(0.146)MNLS(0.002)K;S(0.01)VS(0.479)T(0.479)MNLS(0.031)K;S(0.055)VS(0.87)T(0.075)MNLSK 120.32 0.00014111 116569500.0 11382.6 13052.9 13423.9 11668.900000000001 17202.8 13298.300000000001 13268.8 13129.1 21679.1 19296.9 20844.8 True False 13303.704602148555 13717.236856556367 15327.610873671503 14527.781023836833 14672.290908411356 14705.517279302894 15679.569205870836 14990.19013118245 16768.818464408905 14937.716887720904 15668.460872786842 0.8490753948433173 0.8754680480697767 0.9782461084159625 0.9271989853878274 0.9364219643228874 0.9385425536495164 1.0007089613443325 0.9567110804876553 1.0702275482292698 0.9533621080590563 1.0 13.935575849069286 -6.888393738190652 0.47222860314648574 1.0321572613108125 0.8604756322751956 0.44730766521247467 0.0430228516130808 0.7018450163198793 0.24592186881671518 0.010708950026016595 0.052441225126290215 1.2930230349190776e-07 6.888393738190652 -0.1716816290356169 SVS(ph)TMNLSK ddPTM_A549_PD325901_60min_R1 5 SVSTMNLSK 9 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 S(0.001)VS(0.679)T(0.319)MNLS(0.001)K;S(0.004)VS(0.831)T(0.165)MNLSK;S(0.008)VS(0.887)T(0.102)MNLS(0.002)K;S(0.032)VS(0.484)T(0.484)MNLS(0.001)K;S(0.001)VS(0.847)T(0.152)MNLSK 130.16 4.9743e-05 236007800.0 28380.6 30797.7 31566.199999999997 33897.4 34998.6 34506.8 31402.700000000004 36203.5 34533.2 37709.299999999996 36969.799999999996 True False 31261.77761930653 33393.13026353757 33708.47215498079 35991.16541141899 32540.419074615344 34225.788061493084 32597.746932716793 35481.39279140367 33081.88969643786 35328.32836249058 32422.74897087114 0.9641926922171948 1.0299290258681713 1.0396549714296204 1.1100590342834207 1.0036292451281636 1.0556103090531221 1.0053973820049271 1.0943363507912436 1.020329575575436 1.0896154546991015 1.0 14.984718794850078 -9.094475241017134 4.041809782581693 1.0081008913919407 1.0392695978738964 0.0 0.04599891847146834 0.3161525875984965 10.601473341765562 0.006875807153121559 0.006777685229340144 8.044976113840166e-10 9.094475241017134 0.031168706481955688 SVS(ph)TPPR ddPTM_A549_PD325901_60min_R1 2 SVSTPPR 7 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 S(0.029)VS(0.486)T(0.486)PPR;S(0.021)VS(0.601)T(0.378)PPR 69.998 0.021596 43315000.0 4563.200000000001 4744.3 4185.6 4715.1 4543.5 4380.4 4323.2 5184.5 5180.2 5182.1 6339.9 True False 5026.452704749707 5144.118811122299 4469.65998605748 5006.341018230945 4224.38023422408 4344.727474716992 4487.721741745811 5081.09108033843 4962.494208630751 4854.901321617284 5560.132491937365 0.904016713997097 0.9251791784785132 0.8038765249818854 0.9003995903857577 0.7597625129166918 0.7814071842743304 0.807124964783369 0.9138435257984261 0.8925136614688163 0.8731628839163955 1.0 12.440903545881298 -9.750008824305935 0.6533884771411376 0.9923595413173859 0.843899277007279 0.1485545317162481 0.06391996923718245 0.41434356459276167 0.3741755604989322 0.027481366271337945 0.013343720766487726 1.7782432780529425e-10 9.750008824305935 -0.14846026431010695 SVS(ph)TPSEAGSQDSGDGAVGSR ddPTM_A549_MK2206_60min_R1 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ESD3;E7EMU4;E7ERH4;E7ET01;E7ERR6;E7EUM4;Q13409-7;Q13409-5;Q13409 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 S(0.001)VS(0.521)T(0.448)PS(0.029)EAGSQDSGDGAVGSR 79.97 0.00016462 15922000.0 610.32 517.37 423.46 315.12 438.68 367.16 454.56 381.94 584.27 518.96 423.87 True False 713.3270951086138 543.7019231340593 483.5129955202988 392.32441414627453 374.15075311588214 406.01262749891686 537.1476680800555 436.08116464219387 451.93377788746733 401.72657556662665 318.61138078312854 2.238862570932955 1.7064736413296695 1.5175634791571209 1.2313571887544117 1.1743169757346426 1.2743192867152486 1.685902326400825 1.3686929938608323 1.418448320259747 1.260866999098418 1.0 8.315653990555507 -2.000000077343247 0.6199319742325077 1.2413742417221663 75.18233601654492 0.7198233799480087 0.17102444810052436 76.67567037845409 0.5075056879494135 0.035952878360731494 7745.058255460653 0.009999998219106085 2.000000077343247 73.94096177482275 up SVS(ph)TPSEAGSQDSGDGAVGSR ddPTM_A549_PD325901_60min_R1 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ESD3;E7EMU4;E7ERH4;E7ET01;E7ERR6;E7EUM4;Q13409-7;Q13409-5;Q13409 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVS(0.37)T(0.315)PS(0.315)EAGSQDSGDGAVGSR 159.95 1.3685000000000001e-27 8711400.0 940.57 549.04 755.05 702.46 1004.0 1221.5 718.15 934.68 1233.6 1039.9 921.47 True False 1036.0559739889623 595.3095276560476 806.2922334844945 745.849358797589 933.4825036119679 1211.5525089870346 745.4795912367586 916.0370741577243 1181.756081959556 974.2405365295552 808.1350316796038 1.2820332411969004 0.7366461102654763 0.9977196902462213 0.9229266515614821 1.1551070885664314 1.4991956312907013 0.9224690949077854 1.1335198181594233 1.4623250269245591 1.2055417700489022 1.0 9.658452563516907 -6.8608139551612215 5.355854558147781 1.2133797944835853 0.9688675091092173 0.20738232567503567 0.19909889955205096 0.2603145845860512 11.631809169018098 0.03252608071454562 0.06255220618770024 1.3777995698806865e-07 6.8608139551612215 -0.2445122853743681 SVS(ph)TTNIAGHFNDESPLGLR ddPTM_A549_MK2206_60min_R1 1 SVSTTNIAGHFNDESPLGLR 20 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.083)VS(0.608)T(0.083)T(0.225)NIAGHFNDESPLGLR 173.59 5.2875e-35 14075000.0 893.63 1277.6 1196.7 1303.8 2099.3 1110.3 1275.3 1366.8 2328.0 2311.9 2395.4 True False 1044.4528968441314 1342.6243829291893 1366.4100546430395 1623.2310585298062 1790.4957509258945 1227.7912090425089 1507.0055022494168 1560.5480856494482 1800.7117170520878 1789.6401843157169 1800.5560703232277 0.580072408773494 0.7456720760093671 0.7588822570783634 0.9015165288567831 0.9944126597537575 0.6818955706400753 0.8369667166093229 0.8667034097801274 1.0000864437000465 0.9939374917630023 1.0 10.8142268112204 -3.7785092064266967 0.2028034273773196 1.0327120563656933 6.52156900674805e-14 0.5748059980102167 0.09009610750904722 12.477294436910318 0.26055670461850183 0.08137716619664648 3.589306983317081 0.00016652935255513697 3.7785092064266967 -1.032712056365628 SVS(ph)TTNIAGHFNDESPLGLR ddPTM_A549_PD325901_60min_R1 1 SVSTTNIAGHFNDESPLGLR 20 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.15)VS(0.666)T(0.15)T(0.034)NIAGHFNDESPLGLR 164.04 9.6075e-28 32854000.0 1720.0 1680.5 1150.9 1734.4 1728.9 2101.8 1400.6 1986.8 1990.3 1839.1 1976.5 True False 1894.6131338029222 1822.1216327152633 1229.0069949239191 1841.529948891806 1607.4680283812068 2084.6836376495694 1453.9005994377276 1947.1717153855516 1906.6546124546892 1722.9789121372303 1733.4030300658064 1.0930020894973258 1.051181751220366 0.7090139878648195 1.0623784064932058 0.9273481126430138 1.2026537403539828 0.8387550813168546 1.1233231289042052 1.0999488170862983 0.9939863276181187 1.0 10.75939141629589 SVS(ph)VATGLNMMK ddPTM_A549_MK2206_60min_R1 6 SVSVATGLNMMK 12 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 S(0.01)VS(0.959)VAT(0.031)GLNMMK;S(0.002)VS(0.997)VAT(0.001)GLNMMK;S(0.082)VS(0.917)VAT(0.001)GLNMMK;S(0.051)VS(0.946)VAT(0.003)GLNMMK;S(0.02)VS(0.978)VAT(0.001)GLNMMK;SVS(0.999)VAT(0.001)GLNMMK 211.67 1.6477999999999997e-31 45314200.0 15783.099999999999 16359.3 17895.0 16154.599999999999 23016.3 18802.5 16595.6 16936.899999999998 26644.7 24038.8 24883.100000000002 True False 18446.901420252907 17191.918493780107 20432.78008509835 20112.477725207547 19630.632759508244 20792.168069910615 19610.80570307411 19337.75744208088 20609.71799284268 18608.418384328314 18703.939531376775 0.9862575415894244 0.9191602905334366 1.0924318938703454 1.075307033123577 1.049545349875458 1.1116464547498528 1.048485302798163 1.0338868669694343 1.1018918211464954 0.994892993163915 1.0 14.191054550399713 -5.760623346781372 24.999999588114846 1.0564472093464152 0.9527089025367242 0.5146589693563619 0.038857550761416365 13.188120383484325 403953.85109925154 0.005837850236012553 0.020270343744831897 1.7353083367442877e-06 5.760623346781372 -0.10373830680969098 SVS(ph)VATGLNMMK ddPTM_A549_PD325901_60min_R1 8 SVSVATGLNMMK 12 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 S(0.019)VS(0.974)VAT(0.007)GLNMMK;S(0.005)VS(0.896)VAT(0.099)GLNMMK;S(0.006)VS(0.983)VAT(0.012)GLNMMK;S(0.1)VS(0.892)VAT(0.008)GLNMMK;S(0.001)VS(0.967)VAT(0.031)GLNMMK;S(0.007)VS(0.861)VAT(0.132)GLNMMK;S(0.006)VS(0.969)VAT(0.025)GLNMMK;S(0.01)VS(0.99)VAT(0.001)GLNMMK 240.44 1.2811e-50 90890000.0 33934.0 35123.1 38109.1 39029.100000000006 44508.6 41111.5 41564.0 43806.5 44693.1 43776.1 45478.7 True False 37378.95469910952 38083.046901530186 40695.41269463473 41439.8388654827 41382.46948233429 40776.70157447437 43145.74076469349 42932.74499196556 42814.80443144185 41012.06957512403 39885.108213232365 0.9371656834745306 0.9548186931807214 1.0203159654743907 1.0389802290102483 1.0375418630205735 1.0223540414250702 1.0817506256728513 1.076410392631757 1.0734533852220445 1.0282551912825895 1.0 15.283562571681603 -5.775561167311145 2.3443600184623192 1.0412885146469126 0.9367022764119937 0.7177619809167739 0.02368707019917431 0.1674623975264954 1.7630242191285856 0.004501371163799395 0.023171957691915195 1.6766361767518515e-06 5.775561167311145 -0.10458623823491897 SVS(ph)VDESRPELIFR ddPTM_A549_MK2206_60min_R1 1 SVSVDESRPELIFR 14 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.429)VS(0.552)VDES(0.019)RPELIFR 56.958999999999996 0.0036298000000000003 22333000.0 311.72 378.96 357.23 317.11 535.27 277.91 295.36 275.58 485.03 676.14 363.55 True False 364.3307151777055 398.2474453309684 407.8905856272522 394.8019642356091 456.53249206788155 307.31825173827224 349.02308879823386 314.64430892835446 375.17147943375204 523.3995044003757 273.27050153043734 1.3332237220530212 1.4573378505934746 1.4926257438797164 1.4447295336472143 1.6706248552664664 1.124593580416299 1.2772073342843375 1.151402391279722 1.3728941738410239 1.9153165141100257 1.0 8.094185924818373 -7.2786511489456265 24.97583867106116 1.1833398856805253 1.4772399091614088 0.0 0.2483480944262111 535.72664535359 777386.6115808747 0.022489446112495783 0.036004996446712956 5.264399643643043e-08 7.2786511489456265 0.2939000234808835 SVS(ph)VDESRPELIFR ddPTM_A549_PD325901_60min_R1 3 SVSVDESRPELIFR 14 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 S(0.001)VS(0.998)VDES(0.001)RPELIFR;S(0.029)VS(0.971)VDESRPELIFR;SVS(0.909)VDES(0.091)RPELIFR 158.45 1.3093e-19 76823000.0 3441.2799999999997 3586.63 3916.75 4385.280000000001 4643.35 4364.41 4077.62 3996.29 3950.12 3882.91 4204.17 True False 3790.636212263558 3888.887897379082 4182.564208331096 4656.1487859065155 4317.217114687879 4328.867691975524 4232.796060459283 3916.5808609211417 3784.1101933123227 3637.742399938432 3687.083742429424 1.0280851960704052 1.0547327289118442 1.1343827535566628 1.2628269687301903 1.170902918479215 1.1740627537586732 1.1480064886376267 1.0622435329718065 1.0263152284192405 0.9866177863216957 1.0 11.848264468497028 -8.486048924036437 2.3026637748266694 1.0117361178981394 1.1432235370911148 0.5035205223275298 0.05902834636836087 0.19760618136183086 2.071949278938242 0.01113582795079197 0.013238779598336498 3.265510435514207e-09 8.486048924036437 0.13148741919297535 SVS(ph)VDIR ddPTM_A549_MK2206_60min_R1 1 SVSVDIR 7 0 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 S(0.134)VS(0.866)VDIR 47.082 0.060345 7826200.0 911.35 821.1 832.62 825.75 896.35 879.04 803.62 1015.0 980.55 1030.8 1334.6 True False 1065.1635996317261 862.8904827983375 950.6980360131083 1028.0587870693264 764.4981023876651 972.0594293404722 949.6273517742304 1158.8793583071333 758.4569906165914 797.9415640783083 1003.1819869138264 1.0617850136131122 0.8601534856630754 0.9476825226276451 1.0247978935826296 0.7620731954523577 0.9689761598799245 0.9466152344856683 1.1552035158369338 0.7560512454473955 0.7954105780279044 1.0 9.9703676331864 SVS(ph)VDIR ddPTM_A549_PD325901_60min_R1 2 SVSVDIR 7 0 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 S(0.018)VS(0.982)VDIR;S(0.007)VS(0.993)VDIR 63.534 0.029916 14365000.0 3065.0 3367.9 3343.9 3040.8 3324.2 2820.9 2929.9 2897.2 2501.0 2956.3 3057.8 True False 3376.1565436662536 3651.7247526460787 3570.837162504209 3228.623309842139 3090.719659867436 2797.9275256664137 3041.3989478027984 2839.413073190569 2395.89166746178 2769.6387134746856 2681.709984991256 1.2589566219172137 1.3617150150775852 1.3315523238863027 1.2039420101024332 1.1525182354412993 1.04333710256724 1.1341267194531162 1.0588069139026706 0.8934193782589775 1.0327883063327283 1.0 11.388937509287656 -7.150021254122358 0.6561288278279733 0.9532508168218806 1.3438663372677595 0.8030574597334811 0.06156236437316921 0.23013650827171306 0.18496015639564398 0.013273407543884464 0.04238672926622992 7.07911138772078e-08 7.150021254122358 0.3906155204458789 SVS(ph)VDSGEQR ddPTM_A549_MK2206_60min_R1 2 SVSVDSGEQR 10 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 S(0.147)VS(0.853)VDSGEQR;S(0.031)VS(0.963)VDS(0.006)GEQR 186.87 3.6898e-14 83399000.0 11087.2 11266.8 10353.5 8704.1 11902.6 8254.1 7317.3 8000.4 11556.400000000001 11289.599999999999 11136.0 True False 12958.448303985164 11840.23199560628 11821.78198441273 10836.604890741903 10151.743307278875 9127.54338337186 8646.75869333464 9134.481200197431 8938.893851778674 8739.271519032274 8370.623862035345 1.54808632158921 1.414498153394183 1.4122940152680834 1.2945994312193292 1.212782162309518 1.0904256999014728 1.0329885604526674 1.0912545290234021 1.0678886065255777 1.0440406429763158 1.0 13.031119435409474 -6.468142437096527 0.6468887889781819 1.0287406913564545 1.567986896720501 0.9700334671834852 0.031091656304774822 0.13883656788396243 0.08553032453611073 0.006324611112397695 0.041428259491523574 3.402965631299108e-07 6.468142437096527 0.5392462053640465 SVS(ph)VVTGSEQK ddPTM_A549_PD325901_60min_R1 1 SVSVVTGSEQK 11 0 Q9UPN4-2;Q9UPN4;I3L2J8;Q9UPN4-3 Q9UPN4-2 CEP131 Centrosomal protein of 131 kDa 1 S(0.001)VS(0.939)VVT(0.06)GSEQK 168.98 5.211199999999999e-15 12638000.0 6724.4 8409.0 7906.5 9117.6 9241.8 7889.3 7227.5 7862.8 10765.0 8871.8 9101.8 True False 7407.056137758355 9117.65594138807 8443.082635646851 9680.773444428001 8592.687850479166 7825.052156489083 7502.546467539753 7705.970285752726 10312.58448629591 8311.63303392914 7982.336301063972 0.9279308536237771 1.1422289913008012 1.0577207370380355 1.2127744408786238 1.076462770596854 0.980295976185077 0.9398935580476273 0.9653778035793344 1.2919255838571142 1.0412531770706372 1.0 12.962595346480029 -8.722890574341239 24.9998638605006 1.1378541407105889 1.043914443816872 0.06838778716658533 0.10702207846945777 292.1814151877102 189486.70478985776 0.02224294946657049 0.025220901186147286 1.8928204771934644e-09 8.722890574341239 -0.09393969689371695 SVSDPVEDKKEQES(ph)DEEEEEEEEDEPSGATTR ddPTM_A549_MK2206_60min_R1 3 SVSDPVEDKKEQESDEEEEEEEEDEPSGATTR 32 2 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 SVSDPVEDKKEQES(1)DEEEEEEEEDEPSGATTR;SVSDPVEDKKEQES(1)DEEEEEEEEDEPSGATTR;SVSDPVEDKKEQES(1)DEEEEEEEEDEPSGATTR 313.68 1.7708999999999995e-220 195936000.0 5364.7 6469.7 6529.9 5265.17 7292.200000000001 5938.3 5296.8 5327.2 7667.200000000001 8104.8 6718.5 True False 6270.130205677645 6798.980095677026 7455.938009370423 6555.136886362464 6219.527039918931 6566.6869644754825 6259.159997110261 6082.346913865774 5930.591442002484 6273.92005097194 5050.111028833014 1.241582644397138 1.3463030925179764 1.4763909083981765 1.2980183700787333 1.2315624358374053 1.3003054639756941 1.2394103736282875 1.2043986516611875 1.1743487238483414 1.2423330923125715 1.0 12.302099391137599 -9.273577048803201 0.29188242487106764 0.9513691803805727 1.3724688685023338 0.31791043980472866 0.0919149271029559 0.5347213056252841 0.12760331918187842 0.08361967433988789 0.048481883761830075 5.326267218742179e-10 9.273577048803201 0.42109968812176113 SVSDPVEDKKEQES(ph)DEEEEEEEEDEPSGATTR ddPTM_A549_PD325901_60min_R1 1 SVSDPVEDKKEQESDEEEEEEEEDEPSGATTR 32 2 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 SVSDPVEDKKEQES(1)DEEEEEEEEDEPSGATTR 243.77 8.564399999999998e-132 254180000.0 3733.3 3352.4 3210.8 2790.9 4034.8 3713.9 3315.6 3566.4 3076.0 3804.6 3175.0 True False 4112.3018676898 3634.9185132488246 3428.7041961088894 2963.287554406216 3751.409567304349 3683.65522973962 3441.7769723659358 3495.2653542133235 2946.7264170781423 3564.3769067029007 2784.49512798327 1.476857268077974 1.305413852845019 1.231355789296066 1.0642099979368398 1.3472494635037797 1.3229167444827192 1.23605063545531 1.2552599999500966 1.0582623713234405 1.2800801376458062 1.0 11.443200053023165 -8.782872837563696 2.514907863548709 1.0227415467814378 1.277853153833251 0.18607858230882945 0.12221523017061116 0.14190126111437656 1.7591035105273722 0.017551435850144157 0.018891304506686843 1.6486450479723497e-09 8.782872837563696 0.2551116070518131 SVSDYDGK ddPTM_A549_PD325901_60min_R1 2 SVSDYDGK 8 0 H7BZ94;P07237;I3L398;I3L312;I3L4M2 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 81.594 0.01023 16826500.0 8225.9 7680.400000000001 8047.4 8397.8 10016.9 9477.5 8819.9 8481.400000000001 9333.1 8913.4 10541.599999999999 False True 9060.987312412479 8327.65426236614 8593.544956947386 8916.513033212415 9313.347500429003 9400.318382255116 9155.546120934465 8312.23182347042 8940.862263729525 8350.60640282964 9245.050028708167 0.9800906738498842 0.9007689776157743 0.9295293081446074 0.9644634702380666 1.0073874637247777 1.0167947553625782 0.9903187210998566 0.8991007942259787 0.9670972288917784 0.9032516186390492 1.0 13.174465411319561 -5.561986986613788 0.006211395501439077 1.9018794691696954 2.1004508038624896e-05 0.0 0.046023945866337825 17554.625105779134 17.514492853008225 2566.2560560574198 2800.3200168772055 2.741656322863579e-06 5.561986986613788 -1.9018584646616568 SVSEINS(ph)DDELSGK ddPTM_A549_MK2206_60min_R1 2 SVSEINSDDELSGK 14 0 A0A2R8Y7M0;P82094;P82094-2;F8WF45 A0A2R8Y7M0 TMF1 TATA element modulatory factor 1 SVSEINS(1)DDELSGK;SVS(0.084)EINS(0.916)DDELSGK 293.77 1.2285999999999997e-116 102417000.0 9612.2 10760.6 9179.9 7801.6 11554.3 9453.4 9470.6 9063.199999999999 13169.5 12737.6 12752.6 True False 11234.504364272869 11308.268577761295 10481.747857121778 9712.992350227129 9854.677775888656 10453.75251334094 11191.285430567974 10347.936354885922 10186.629277370059 9860.167313352604 9585.777466145102 1.1719972014738205 1.179692374217914 1.0934687242783436 1.0132712119107001 1.0280520083731604 1.0905482158605642 1.1674885495822513 1.0795093451139044 1.0626815939914145 1.0286246836186828 1.0 13.226679732837674 -2.000000023493048 0.014853027083722376 0.08930829767217041 2.292044163393769 0.36852810346032416 0.049525488643347514 3313.284726778765 3.69572166369996 218.328851487707 343.0419771281612 0.009999999459052595 2.000000023493048 2.2027358657215985 SVSEINS(ph)DDELSGK ddPTM_A549_PD325901_60min_R1 2 SVSEINSDDELSGK 14 0 A0A2R8Y7M0;P82094;P82094-2;F8WF45 A0A2R8Y7M0 TMF1 TATA element modulatory factor 1 S(0.055)VS(0.03)EINS(0.915)DDELSGK;SVS(0.006)EINS(0.994)DDELSGK 273.54 2.483699999999999e-84 173994000.0 30276.0 31824.0 30862.0 29396.0 36172.0 29792.0 31727.0 33041.0 30898.0 35408.0 34671.0 True False 33349.59723198679 34505.92016633771 32956.4809082822 31211.724156840137 33631.40350662558 29549.383829506136 32934.38834668057 32381.971334836922 29599.464510689337 33172.3328372329 30406.686797577295 1.0967849754233656 1.1348135492712421 1.0838563611905283 1.026475668481151 1.1060528800956118 0.9718054461579988 1.0831297920069567 1.0649621759322037 0.9734524747052588 1.0909551921281986 1.0 14.892101004168293 -6.793195902026014 0.3705699388577453 0.9852637801711361 1.1414810377564764 0.08734171949352898 0.050781347115701626 1.2813164177961893 0.25339452686886804 0.013870787723049203 0.07692331561743747 1.6099192672356835e-07 6.793195902026014 0.15621725758534022 SVSENS(ph)LVAMDFSGQTGR ddPTM_A549_MK2206_60min_R1 1 SVSENSLVAMDFSGQTGR 18 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 S(0.005)VS(0.34)ENS(0.654)LVAMDFS(0.001)GQTGR 76.52600000000001 0.00015722 5027200.0 1678.3 1904.6 1774.3 1631.9 2883.8 1788.6 2043.6 2039.3 3382.7 2983.3 3456.6 True False 1961.5560095044993 2001.5360047956567 2025.9224199491468 2031.7155732587744 2459.5968401467594 1977.86846482341 2414.895667213132 2328.3770200943236 2616.5238510618997 2309.3704580081658 2598.230822693191 0.7549583325592498 0.7703457242189778 0.7797315012409795 0.7819611543029898 0.9466429305142602 0.7612366259181139 0.9294384648666345 0.896139403688872 1.0070405709180785 0.8888242098576878 1.0 11.34331388787377 -7.779899974600896 0.5592785526951866 1.0113389107058968 0.7614067321184756 0.5383208511843145 0.06372579051137235 0.26593552383476277 0.17101917441508918 0.01264499739820665 0.025617717542535293 1.659969182524067e-08 7.779899974600896 -0.24993217858742112 SVSENS(ph)LVAMDFSGQTGR ddPTM_A549_PD325901_60min_R1 1 SVSENSLVAMDFSGQTGR 18 0 A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322 A0A2R8YCL1 GRB10 Growth factor receptor-bound protein 10 1 S(0.008)VS(0.151)ENS(0.84)LVAMDFS(0.001)GQTGR 116.83 1.7003e-10 8056500.0 2251.8 1920.1 2732.6 2402.2 2897.8 2557.2 2614.3 2700.5 3157.6 2641.7 3060.6 True False 2480.4010783124536 2081.913565591535 2918.0506684586862 2550.5784382079673 2694.2685248672915 2536.3750110369583 2713.7886170998504 2646.6364089987337 3024.897052849784 2474.9026111646585 2684.16560274192 0.9240864556861479 0.77562783885794 1.08713511024724 0.9502313998817766 1.0037638967264357 0.9449398384533387 1.011036209661457 0.9860183016633365 1.1269412922063382 0.9220379728570042 1.0 11.390257967707011 -5.491975470789072 0.42212336011209073 1.053193501714323 0.7580122745789226 0.09354050804502134 0.0837871729701286 3.450322623511719 0.46235340693355637 0.0185586315723557 0.49129482497433286 3.2212507243044693e-06 5.491975470789072 -0.2951812271354004 SVSGS(ph)PEPAAK ddPTM_A549_MK2206_60min_R1 3 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.002)VS(0.001)GS(0.997)PEPAAK;SVSGS(1)PEPAAK;SVS(0.062)GS(0.938)PEPAAK 205.56 1.4689000000000002e-24 45070900.0 9433.5 10163.1 8454.6 8170.5 13060.100000000002 9539.7 9638.3 9348.900000000001 13198.399999999998 15472.5 15506.699999999999 True False 11025.644173068398 10680.35837989013 9653.589410867417 10172.272866787687 11138.976590609851 10549.184722059646 11389.45434982401 10674.135204805485 10208.983473513865 11977.251503882064 11655.958426851965 0.945923429828687 0.9163003151491744 0.8282106933933748 0.8727101190884231 0.9556465614143632 0.9050465294863586 0.9771358075184957 0.9157664100976336 0.8758596333009658 1.0275647068446927 1.0 13.508780016432953 -10.914833788777678 1.091879940799539 1.0015883245810204 0.9074533379614724 0.4774516372426362 0.04085159283712087 0.43196357742015223 0.8889839719049538 0.031852177771590585 0.007040529464440015 1.2166515429382286e-11 10.914833788777678 -0.094134986619548 SVSGS(ph)PEPAAK ddPTM_A549_PD325901_60min_R1 2 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.014)VS(0.032)GS(0.954)PEPAAK;S(0.026)VS(0.011)GS(0.963)PEPAAK 148.18 1.4838e-11 73878000.0 15601.1 13857.8 13476.2 16134.1 15035.2 18492.6 14022.5 15487.199999999999 14987.7 16009.8 17995.0 True False 17184.91218707721 15025.64543995333 14390.77597097378 17130.666713800336 13979.179420624167 18342.002396801996 14556.133910906425 15178.295646526629 14357.819090130719 14998.938495750446 15781.729079703593 1.0889118739960002 0.9520912039528902 0.9118630726896284 1.0854746414213619 0.8857824988646122 1.1622302159774809 0.9223408814960986 0.9617637946938893 0.9097747792791525 0.9503989341091991 1.0 13.945967658288364 SVSGS(ph)PESDELQELR ddPTM_A549_MK2206_60min_R1 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SVS(0.001)GS(0.999)PESDELQELR 235.35 2.3521999999999993e-64 6673800.0 1879.6 2180.7 1390.9 2055.0 2582.0 2180.1 1998.8 2009.5 3203.0 3352.3 3128.9 True False 2196.8305281920143 2291.688315477208 1588.150534806554 2558.4750922524554 2202.1912203547176 2410.796734966741 2361.9560871137264 2294.3527788356505 2477.5256141399655 2595.0131017265344 2351.907776753087 0.9340632102610912 0.9743954835852388 0.675260548268209 1.0878296834345025 0.9363425054850323 1.0250388041553877 1.0042724083231322 0.9755283780740358 1.053411038744172 1.1033651605629984 1.0 11.199615774840817 -6.308634508911213 24.999995401506716 1.017671716690963 0.8725543977483828 0.4283463466827848 0.0828795988550947 264.3990018959285 140055.84178456353 0.010184138184928134 0.02366586177578144 4.913211855117553e-07 6.308634508911213 -0.14511731894258018 SVSGSPES(ph)DELQELR ddPTM_A549_PD325901_60min_R1 1 SVSGSPESDELQELR 15 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 SVSGS(0.268)PES(0.731)DELQELR 154.47 2.172e-19 11307000.0 890.05 858.82 720.62 579.16 968.29 803.32 1091.3 839.28 581.74 891.27 872.37 True False 980.4072207798201 931.1957754290526 769.5256066400855 614.9333978322063 900.2806508191555 796.7780282598973 1132.8300186822744 822.5399019975774 557.2914908553437 834.9950600949097 765.0740204090602 1.2814540745425238 1.2171316115676918 1.0058185039777527 0.803756736509523 1.176723593800512 1.041439137920127 1.4806802851266432 1.0751115317675957 0.7284151284569539 1.0913912089819298 1.0 9.579455524130383 -8.60017586507105 7.517477154175102 0.8724327342782395 1.1362055105401672 0.16529845796613019 0.18328606113596344 0.21980671629630455 18.351847652864997 0.031819227082938634 0.03608845171440629 2.5108694633611774e-09 8.60017586507105 0.26377277626192763 SVSKES(ph)VASMGADSGDDFASDGSSSR ddPTM_A549_PD325901_60min_R1 2 SVSKESVASMGADSGDDFASDGSSSR 26 1 Q5T165;Q92805 Q5T165 GOLGA1 Golgin subfamily A member 1 1 S(0.013)VS(0.315)KES(0.672)VASMGADSGDDFASDGSSSR;S(0.049)VS(0.447)KES(0.488)VAS(0.016)MGADSGDDFASDGSSSR 177.81 4.0271e-49 70255000.0 11644.3 12510.599999999999 12276.4 13443.2 15216.8 13821.400000000001 13368.400000000001 15046.1 15617.7 15461.2 15805.599999999999 True False 12826.420763919401 13564.912167954522 13109.550327990268 14273.555932277628 14148.024463110161 13708.843100870572 13877.141777469174 14745.993732062898 14961.342381014734 14484.977193375096 13861.611399953494 0.9253196034598427 0.9785956175340504 0.9457450472197085 1.0297183725930679 1.0206623209158516 0.9889790375249277 1.0011203875990733 1.0638008314179384 1.0793364457659613 1.044970658564537 1.0 13.758807358784388 -5.8646815055906005 0.605571121866055 1.0370351178611992 0.9059512630389758 0.5941982188405277 0.028645108146209554 1.2927889814719928 0.48373254918605957 0.006557236837159879 0.10203115828994878 1.3655842349701247e-06 5.8646815055906005 -0.1310838548222234 SVSMLSLNT(ph)PNSNR ddPTM_A549_MK2206_60min_R1 4 SVSMLSLNTPNSNR 14 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 SVSMLS(0.078)LNT(0.919)PNS(0.002)NR;SVSMLS(0.004)LNT(0.991)PNS(0.005)NR;SVSMLSLNT(0.795)PNS(0.205)NR;SVSMLSLNT(1)PNSNR 134.9 5.740499999999999e-09 27334100.0 6043.750000000001 7732.5 7049.68 6798.87 9419.6 6719.52 6658.049999999999 6953.6 11311.6 9051.3 10767.9 True False 7063.7872444990935 8126.051221822128 8049.4306292437 8464.593455212875 8033.989318068663 7430.575146343622 7867.731501804851 7939.294094506882 8749.5406609134 7006.6050435991365 8093.933251078517 0.8727261549331214 1.0039681536463538 0.9945017310553078 1.045794818493835 0.9925939674629926 0.918042553087956 0.9720529262774036 0.9808944363914751 1.0809998537790664 0.8656613325376147 1.0 12.9826252361237 -8.64835525713896 8.48034716305672 1.038202583553442 0.9752801930099364 0.0 0.06963277624832138 0.2670565598112123 18.986627754938088 0.008560312164551706 0.009704257930729722 2.2472156094057718e-09 8.64835525713896 -0.06292239054350568 SVSMLSLNT(ph)PNSNR ddPTM_A549_PD325901_60min_R1 5 SVSMLSLNTPNSNR 14 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 SVS(0.002)MLS(0.068)LNT(0.924)PNS(0.006)NR;SVSMLSLNT(0.999)PNSNR;SVSMLSLNT(1)PNSNR;SVSMLSLNT(0.997)PNS(0.003)NR;SVSMLSLNT(0.88)PNS(0.12)NR 146.59 4.0024e-13 25681300.0 14256.1 15250.9 14755.599999999999 15305.6 18468.199999999997 18414.899999999998 16213.7 17185.1 18271.1 17022.0 19987.7 True False 15703.368777213873 16536.146866038212 15757.003748630967 16250.992150460344 17171.057343831228 18264.935159840643 16830.721225977082 16842.329699049853 17503.229206461783 15947.228015007307 17529.339612469674 0.8958334497691586 0.9433411201797389 0.8988931754977274 0.927073837904312 0.9795609945064001 1.0419636771055365 0.960145766929199 0.9608079979846412 0.9985104740631919 0.9097449400582714 1.0 14.097484025632 -6.77784774233203 3.6837145411029764 0.995949930629137 0.9155602399685172 0.37516484176381026 0.03514603122851353 0.08956985342772267 2.5990264374202683 0.0033318316187865324 0.0068549072313724806 1.6678318289499726e-07 6.77784774233203 -0.08038969066061974 SVSPT(ph)T(ph)EMVSNESVDYR ddPTM_A549_PD325901_60min_R1 1 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 2 S(0.01)VS(0.031)PT(0.637)T(0.636)EMVS(0.635)NES(0.048)VDY(0.003)R 44.543 0.013012000000000001 2616000.0 301.84 426.54 327.97 383.63 345.56 737.54 381.75 440.33 471.69 788.03 376.49 True False 332.482574597136 462.48602274226005 350.2280164438248 407.3259538130555 321.2890577172826 731.5337187706073 396.2777051516155 431.5472727177973 451.86650964616 738.2736513139591 330.18411676674674 1.0069611399024774 1.4006913090522033 1.060705220691272 1.2336327919153192 0.9730603060602461 2.2155327334760546 1.2001719193281473 1.306989799944426 1.3685289106906795 2.2359453826650926 1.0 8.367126912045931 -4.225135732439579 16.46339430851031 1.238493237264858 1.2070107075060683 0.0 0.44837765463607815 0.0 0.0 0.042598629506296413 0.0 5.954760070565527e-05 4.225135732439579 -0.031482529758789735 SVSPT(ph)TEMVSNESVDYR ddPTM_A549_MK2206_60min_R1 2 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 S(0.05)VS(0.071)PT(0.409)T(0.409)EMVS(0.045)NES(0.015)VDY(0.001)R;S(0.007)VS(0.375)PT(0.564)T(0.054)EMVS(0.001)NESVDYR 80.706 0.00012272 7749200.0 1132.61 1203.31 961.46 1266.3 1251.3899999999999 1092.8400000000001 1397.76 971.43 1480.69 1856.8200000000002 1819.49 True False 1323.7668783440924 1264.5533392474335 1097.8094853656698 1576.5435568463665 1067.3121887063085 1208.4836034315183 1651.7148991015013 1109.1331773796053 1145.316079176055 1437.3630723825038 1367.6604176306291 0.9679061127157726 0.9246106145545829 0.8026915681800193 1.1527302658781424 0.7803926873568134 0.8836137888125234 1.2076937211965055 0.8109711760914283 0.8374272329678376 1.0509648841578887 1.0 10.417494346306476 -4.939961195777477 16.098779790552516 0.9286727819522304 1.3311036390879176 0.0 0.13822966920699362 29377495.00192484 171039615.17850074 0.017337162525023014 386936102.5376258 1.1482562136341305e-05 4.939961195777477 0.40243085713568727 SVSPTTEMVS(ph)NESVDYR ddPTM_A549_MK2206_60min_R1 1 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 SVSPT(0.001)T(0.003)EMVS(0.644)NES(0.353)VDYR 71.555 0.00035134 3548600.0 1316.7 1390.1 816.57 1136.2 1519.5 1481.4 1132.2 1102.1 1993.6 2145.9 2324.5 True False 1538.9267697757114 1460.8501524028368 932.3719046710673 1414.5690510059562 1295.9835628694793 1638.1607647262663 1337.9060845658196 1258.3260500396968 1542.052783125018 1661.1396996077244 1747.2624970636807 0.8807644943801616 0.8360793840981723 0.5336186784973306 0.8095916059454007 0.7417223027721438 0.9375584764620298 0.7657155618083745 0.7201700100324627 0.8825535863766762 0.9507098689517529 1.0 10.77088065007971 -9.46276542881888 0.579383552306208 0.9964253160510192 0.7671715315045584 0.34579943927112833 0.10119801456792507 0.5132554734081493 0.38487233557502204 0.04736159388581735 0.027230410506305473 3.4453597132166233e-10 9.46276542881888 -0.22925378454646084 SVSPTTEMVSNES(ph)VDYR ddPTM_A549_MK2206_60min_R1 1 SVSPTTEMVSNESVDYR 17 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 SVSPTTEMVS(0.002)NES(0.998)VDYR 104.45 1.2964e-08 2047500.0 978.26 1140.7 869.83 1038.6 1336.8 1116.2 1132.3 983.91 1715.7 1675.5 1843.0 True False 1143.3663718392859 1198.756757676366 993.1849735356856 1293.0570466245256 1140.1584908482523 1234.3155431264056 1338.0242532713985 1123.3822555980023 1327.096689409909 1297.003386314712 1385.3322357876386 0.825337303429757 0.8653207705044169 0.7169290859466679 0.9333912928759291 0.8230216993398761 0.8909888265356276 0.9658508036598579 0.8109117990453004 0.9579627580494295 0.9362399522720218 1.0 10.43601629519146 -8.219365508849169 0.32898709091748357 1.011104677476655 0.7997589200172134 0.3696061003155341 0.06405971352484684 0.738915557147769 0.21800881586823195 0.037434770002478475 0.05494022271378963 6.0344055084660065e-09 8.219365508849169 -0.21134575745944162 SVSS(ph)DSLGPPRPAPAR ddPTM_A549_MK2206_60min_R1 1 SVSSDSLGPPRPAPAR 16 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 S(0.104)VS(0.374)S(0.418)DS(0.104)LGPPRPAPAR 43.598 0.017775 28016000.0 2538.3 2654.1 2162.2 2750.0 3103.6 2470.6 2178.5 2224.8 3286.4 3591.0 3270.0 True False 2966.702984523192 2789.182353422323 2468.8324727577333 3423.750123452189 2647.064551314059 2732.0372521484483 2574.30525103925 2540.1722131642478 2542.0356473023994 2779.7906059421875 2457.968752591197 1.206973433407437 1.1347509403778873 1.0044197958802705 1.39291849005113 1.0769317341904843 1.1115020275454388 1.0473303406828955 1.0334436556552609 1.034201775194489 1.1309300018609778 1.0 11.26325085994619 -7.604240633110624 1.47717242471159 1.0176070655870375 1.1667980400393045 0.22855534731565474 0.0955759787855825 0.30760459961828757 1.3544710263222242 0.01385447328857335 0.023412246117983555 2.487478678638425e-08 7.604240633110624 0.14919097445226703 SVSS(ph)PTSSNTPTPTK ddPTM_A549_MK2206_60min_R1 2 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVS(0.019)S(0.936)PT(0.044)SSNTPTPTK;SVS(0.011)S(0.792)PT(0.182)S(0.013)S(0.002)NTPTPTK 194.55 2.3804999999999997e-38 19156000.0 5011.200000000001 6208.1 5921.0 4816.0 7598.2 4715.0 5366.5 4956.0 7990.200000000001 7703.799999999999 7843.7 True False 5856.968047922873 6524.065773060973 6760.686833409743 5995.920216198454 6480.514845274679 5213.938170436307 6341.523584898845 5658.528177113455 6180.432457727495 5963.506229478536 5895.892814892838 0.9933979859892225 1.1065441618242091 1.1466773643395385 1.0169656071516344 1.0991575065450825 0.8843339480775608 1.0755832549873292 0.9597406796168669 1.048260653944712 1.0114678839504865 1.0 12.525494581681881 SVSS(ph)PTSSNTPTPTK ddPTM_A549_PD325901_60min_R1 2 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVS(0.016)S(0.968)PT(0.016)SSNTPTPTK;SVS(0.013)S(0.986)PT(0.001)SSNTPTPTK 254.18 9.872899999999998e-77 47745000.0 7903.9 7933.0 8648.5 7689.7 9007.2 8702.9 9223.6 9023.3 7822.4 7853.2 8401.2 True False 8706.298109456346 8601.54175086592 9235.439217655323 8164.675304424197 8374.565345153102 8632.026467837297 9574.609145347584 8843.323202858093 7493.651731128756 7357.3476117645 7367.905659594664 1.181651681182806 1.1674337523126106 1.2534687120523471 1.1081405872497785 1.1366276567680451 1.1715712533040463 1.2995021363878754 1.2002492446876143 1.0170667320326425 0.9985670218488186 1.0 12.84703887360134 -8.772600326592638 8.897525844834938 1.007948240557518 1.189807481450345 0.7348820067803636 0.04937967162632169 0.0579361425837679 33.91451789916864 0.008736615092698612 0.00946436741764617 1.6881058442364567e-09 8.772600326592638 0.181859240892827 SVSS(ph)SSYR ddPTM_A549_PD325901_60min_R1 1 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.013)S(0.984)S(0.003)SYR 152.86 0.00052297 65253000.0 5244.2 6220.9 5470.4 5684.4 5687.4 5966.1 5652.7 6197.1 5600.4 6360.7 5876.7 True False 5776.587323424005 6745.157075250449 5841.654240187508 6035.5124777909305 5287.9366444648485 5917.5140596541505 5867.816591776129 6073.493978969097 5365.03466391561 5959.0843164761445 5153.903155470637 1.120817979921182 1.3087473458034942 1.1334427644389968 1.1710566333371057 1.0260062102354293 1.148161671096395 1.138518985469819 1.1784260968354354 1.0409653619938253 1.1562274526153724 1.0 12.331449713121762 -8.126378738483574 0.22418385156600515 0.9607748882947058 1.2439939793132277 0.0 0.08154111659677225 1.4705673122177936 0.248646236311455 0.10030847182536966 0.14948814049946674 7.475173230749106e-09 8.126378738483574 0.28321909101852194 SVSS(ph)YGNIR ddPTM_A549_MK2206_60min_R1 2 SVSSYGNIR 9 0 Q8N122;Q8N122-3 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 SVS(0.038)S(0.962)YGNIR;SVS(0.128)S(0.872)YGNIR 178.55 1.067e-35 12978000.0 4304.7 5253.9 4896.7 4334.5 6233.1 4969.3 3962.5 5242.1 7755.9 8425.8 8795.3 True False 5031.2281201894875 5521.301068778696 5591.125691126074 5396.452694583097 5316.21924693764 5495.148027645625 4682.434958569214 5985.183728257959 5999.201033627277 6522.405928027754 6611.184272068912 0.7610176805153562 0.8351455414887193 0.8457071321922752 0.8162611224409759 0.8041251049978638 0.8311896630777116 0.7082596348662791 0.9053118899656609 0.9074321311800132 0.9865714915228985 1.0 12.690693011826927 -9.063753398373116 0.8563119572428227 0.9787650201905378 0.806052924060061 0.716665977833235 0.045142709313989 0.19725904728263424 0.30437422169874706 0.012205383432040863 0.010725961522495246 8.63468704454919e-10 9.063753398373116 -0.17271209613047678 SVSS(ph)YGNIR ddPTM_A549_PD325901_60min_R1 2 SVSSYGNIR 9 0 Q8N122;Q8N122-3 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 SVS(0.048)S(0.952)YGNIR;SVS(0.039)S(0.961)YGNIR 182.39 5.4796999999999994e-11 64617000.0 14093.0 13432.099999999999 13372.099999999999 13865.099999999999 15131.2 13885.599999999999 14826.8 14696.7 16826.8 17519.3 18011.3 True False 15523.710985281738 14564.070206959055 14279.611118969626 14721.515737073207 14068.436711806176 13772.520277356012 15391.041987536277 14403.562789161895 16119.628112773245 16413.128408137552 15796.024283037805 0.9827606432557536 0.9220085982393902 0.9040003271141749 0.9319760132859232 0.890631494338309 0.8718978921895755 0.9743617578547021 0.911847344057886 1.0204864099938702 1.0390670534586612 1.0 13.947273870299757 -8.761221664236327 24.999971752469623 1.0096741419586892 0.9221109381990044 0.632609629097486 0.03236994600776285 2.667921274431898 306349.3735784246 0.005249822648572865 0.005770835257831537 1.7329192886625197e-09 8.761221664236327 -0.08756320375968485 SVSSNDAYNFNLEEGVHLT(ph)PFR ddPTM_A549_PD325901_60min_R1 2 SVSSNDAYNFNLEEGVHLTPFR 22 0 Q5FBB7-6;Q5FBB7 Q5FBB7-6 SGOL1 Shugoshin-like 1 1 SVSSNDAYNFNLEEGVHLT(1)PFR;SVSSNDAYNFNLEEGVHLT(1)PFR 119.32 3.8966999999999996e-15 4093200.0 1222.06 1382.26 1207.02 945.99 1202.95 1413.38 1169.4 1185.6100000000001 1298.3899999999999 1366.03 1395.51 True False 1346.1226315669762 1498.747901241891 1288.9356356008939 1004.4216538008308 1118.4589419522088 1401.869901884646 1213.9021569202334 1161.9620784569481 1243.8231835728502 1279.7786326718617 1223.8711168667508 1.0998892064821362 1.2245961854863086 1.0531628844225982 0.8206923424847744 0.9138698728470616 1.1454391582290073 0.991854567193285 0.9494153938624708 1.0163024246843728 1.0456808850495962 1.0 10.25723592369979 -5.9648727731847995 7.852502150431576 0.9936814470973981 1.157674823121995 0.4104024404346561 0.08111638123483197 0.16073653317858708 29.913327261431128 0.01075419312052189 0.03346937129916244 1.0842444975423208e-06 5.9648727731847995 0.16399337602459696 SVSSNVAS(ph)VSPIPAGSK ddPTM_A549_MK2206_60min_R1 1 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.563)VS(0.437)PIPAGSK 244.97 2.0373999999999994e-74 24219000.0 3425.0 4309.4 3091.8 3073.9 4662.2 3535.4 3743.2 3722.6 5482.4 5940.7 4518.4 True False 4003.0562667895547 4528.730053064376 3530.2637310481714 3827.005637992613 3976.3965559789926 3909.5136813914132 4423.290987234392 4250.289949984372 4240.645153593803 4598.69174400466 3396.356578503993 1.1786325064115608 1.3334083004497614 1.0394267060742959 1.126797363449485 1.1707830035121023 1.1510904673953442 1.3023635431067537 1.2514263010206408 1.248586553141513 1.3540073421944006 1.0 11.729772217944562 -10.798053612957933 1.041676427684459 0.9998418394457134 1.2017850060152184 0.0 0.13024608762813997 0.38131058588569294 0.7336460100601063 0.05622300180451786 0.014023097178972446 1.592012183566707e-11 10.798053612957933 0.20194316656950506 SVSSNVASVS(ph)PIPAGSK ddPTM_A549_MK2206_60min_R1 3 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.004)VS(0.995)PIPAGS(0.001)K;SVSSNVAS(0.101)VS(0.899)PIPAGSK;SVSSNVAS(0.007)VS(0.993)PIPAGSK 208.59 7.198899999999999e-55 50762800.0 5908.6 5905.5 6803.4 7051.1 8203.2 7129.0 6736.3 6210.3 10330.9 9592.6 9852.4 True False 6905.827228599348 6206.064725570068 7768.224421959099 8778.619816535907 6996.520146713328 7883.386048152789 7960.19851392045 7090.629043246099 7990.967645057312 7425.6249976499585 7405.777167593126 0.9324919008930617 0.8380031676792992 1.0489411504240234 1.1853745552796526 0.9447381400198399 1.064491392294333 1.0748633578597815 0.9574456377480434 1.0790181049498648 1.0026800468887564 1.0 12.85443542557795 -5.770450093209415 24.999992920790707 1.0412800367661046 0.8852475303036821 0.4488750127205 0.06600227984332288 104.19025228834315 289076.5079537584 0.008608639334496971 0.027327817805347467 1.6964845419560583e-06 5.770450093209415 -0.1560325064624225 SVSSNVASVS(ph)PIPAGSK ddPTM_A549_PD325901_60min_R1 2 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.102)VS(0.898)PIPAGSK;SVSSNVAS(0.013)VS(0.987)PIPAGSK 299.23 3.089599999999999e-133 130765000.0 13503.1 10059.7 10373.2 10654.8 12976.0 12183.7 12380.5 12151.400000000001 12826.4 10783.2 11999.6 True False 14873.924771543165 10907.466223520223 11077.187731118951 11312.922797193509 12064.610524769818 12084.479986692868 12851.646702369544 11909.030794411114 12287.351013007506 10102.346911727578 10523.725271731668 1.4133706826704036 1.0364643642702591 1.0525918764597522 1.0749922204432443 1.146420132914074 1.1483081964476616 1.2212069747669134 1.1316364202703568 1.1675856881225517 0.959959201791786 1.0 13.361357871223307 -10.729749883347559 0.878439109356141 0.9956622823724184 1.1476513895372242 0.31162197685778736 0.09806542165828713 0.7229927032060774 0.9456850154319865 0.07309776782358333 0.01685899205821371 1.8631598492101087e-11 10.729749883347559 0.15198910716480585 SVSSNVASVS(ph)PIPAGSKK ddPTM_A549_MK2206_60min_R1 2 SVSSNVASVSPIPAGSKK 18 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.003)VS(0.99)PIPAGS(0.007)KK;SVSSNVAS(0.005)VS(0.995)PIPAGSKK 120.32 1.3258e-10 50324000.0 11799.599999999999 12752.6 14183.0 11350.0 20209.5 15171.1 14435.0 13809.5 20215.8 19357.8 19695.4 True False 13791.084007477382 13401.65286924136 16194.362668172662 14130.750509520858 17236.70932136276 16776.495732238862 17057.65265033352 15767.038914820061 15636.953577998973 14984.859535424011 14804.488614613045 0.9315474763420493 0.9052425394831274 1.0938819360628043 0.9544909572609511 1.1642894104662924 1.1332033256237781 1.1521946549032736 1.065017463639839 1.0562305787829935 1.0121835293002237 1.0 13.853747036501668 -5.754126561661705 24.99867538107754 1.052842992030556 0.9183949468659489 0.4371291034986362 0.06400100410228339 134.37052134343855 459330.0440052671 0.00947023669239921 0.03523346743691449 1.7614626479326044e-06 5.754126561661705 -0.13444804516460707 SVSSNVASVS(ph)PIPAGSKK ddPTM_A549_PD325901_60min_R1 4 SVSSNVASVSPIPAGSKK 18 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.001)VS(0.999)PIPAGSKK;SVSSNVAS(0.011)VS(0.989)PIPAGSKK;SVSSNVAS(0.002)VS(0.998)PIPAGSKK;SVSSNVAS(0.001)VS(0.999)PIPAGSKK 154.13 7.172399999999999e-23 93131000.0 20039.4 20648.0 22191.800000000003 21280.100000000002 26193.4 23228.5 24577.0 23313.200000000004 24772.600000000002 23207.7 25313.0 True False 22073.78513577344 22388.079424162297 23697.868998134185 22594.523446386364 24353.66594632444 23039.33479738464 25512.29118405043 22848.19993714842 23731.493771037043 21742.36186134915 22199.66147232772 0.9943298082850863 1.0084874245523718 1.0674878546086843 1.0177868466395692 1.0970287081486232 1.037823699523688 1.1492198300344338 1.0292138898437309 1.0690025071156504 0.9794006043043223 1.0 14.438250056308714 -5.619289225547976 5.888972281958599 1.046098509182789 0.9977686278936402 0.14657794734970697 0.04468343867175142 0.28194681008912414 13.848457939987478 0.0059430022895172255 0.023933197008973218 2.402762108146573e-06 5.619289225547976 -0.048329881289148835 SVSSPS(ph)SFTMK ddPTM_A549_PD325901_60min_R1 1 SVSSPSSFTMK 11 0 E7EPS8;P28827;P28827-2;J3QRB4 E7EPS8 PTPRM Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase mu 1 SVS(0.017)S(0.067)PS(0.366)S(0.366)FT(0.185)MK 45.077 0.017447 4137800.0 2389.4 2256.6 2797.2 2871.3 3227.6 2967.8 2424.1 2981.7 4049.8 2995.7 3746.2 True False 2631.9701290166886 2446.7716015383885 2987.034812930042 3048.653679804569 3000.9045106155245 2943.631220770955 2516.3504520184183 2922.2276544016013 3879.6009895588627 2806.5509907506394 3285.441149118399 0.8011009814383496 0.7447315262959266 0.9091731299863854 0.9279282572517336 0.913394693257791 0.895962242866787 0.7659094586715226 0.8894475724167937 1.1808462892722633 0.8542387044442227 1.0 11.681871384559646 -8.65835140386554 6.492531347896933 1.0850688003287194 0.8547122228414792 0.26135568659589725 0.09832774530266482 0.10718462217171673 5.953450229388795 0.01473917282747656 0.016698589441442705 2.196082221655185e-09 8.65835140386554 -0.23035657748724025 SVSSPTSSNT(ph)PTPTK ddPTM_A549_MK2206_60min_R1 2 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVSSPTSS(0.02)NT(0.966)PT(0.014)PTK;SVSS(0.004)PT(0.002)S(0.02)S(0.04)NT(0.93)PT(0.003)PTK 168.5 4.232100000000001e-27 12619100.0 3208.8 3529.6 3337.6000000000004 3234.0 4049.6000000000004 3258.8 2773.5 3728.6000000000004 4835.2 5648.2 4933.0 True False 3750.366992372065 3709.241563859475 3810.9218671150747 4026.330145179777 3453.90920447268 3603.6440529836314 3277.4090492345003 4257.140468358597 3740.0349202277744 4372.267697154733 3707.9999561261066 1.011425845940468 1.0003348456709977 1.0277567185023635 1.0858495665642462 0.9314749852589305 0.9718565522175734 0.8838751585797047 1.1480961485248233 1.0086394186841188 1.1791444845977326 1.0 11.856425511555237 -6.748011689531717 24.992080572085822 0.9993316458541528 1.0288708545976044 0.0 0.08399495666603213 663.5071332004528 1234936.3531691702 0.008863584789129146 0.018369706737141358 1.7864394901468715e-07 6.748011689531717 0.029539208743451617 SVSSPTSSNT(ph)PTPTK ddPTM_A549_PD325901_60min_R1 2 SVSSPTSSNTPTPTK 15 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 SVSSPTSSNT(0.989)PT(0.01)PTK;SVSSPTS(0.008)S(0.285)NT(0.685)PT(0.021)PTK 166.04 2.4973999999999996e-20 14846700.0 4709.3 4075.5 4699.3 5609.4 5110.0 5498.9 5416.2 5598.9 5538.4 5264.4 5137.700000000001 True False 5187.38466919657 4418.956687968492 5018.222757186523 5955.879898128286 4751.091228542982 5454.118781554482 5622.31645485836 5487.225547247922 5305.6403083048035 4932.004885571876 4505.7954705636685 1.1512694491096453 0.98072731370909 1.1137262643123815 1.3218265092230683 1.0544400560526614 1.2104674562319135 1.2477966413675268 1.2178150524354534 1.1775146792539777 1.0945913807656453 1.0 12.137566112150102 -10.622306927823992 0.9408756116757484 1.0017435844730687 1.1633346008389809 0.16905668142535824 0.09206066327526202 0.5439985176524453 0.8722446101640774 0.05755819881081929 0.016289784413893577 2.3861243473487817e-11 10.622306927823992 0.16159101636591222 SVSSS(ph)SYR ddPTM_A549_MK2206_60min_R1 1 SVSSSSYR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.001)S(0.005)S(0.927)S(0.066)YR 90.26299999999999 0.0026397 14953000.0 3647.3 3731.6 3408.6 3108.5 4261.9 3532.1 3187.4 3616.5 5054.2 6147.1 5225.9 True False 4262.875072076366 3921.5225010477134 3891.990734734072 3870.082639545866 3634.9801557047917 3905.8644775817766 3766.50932162612 4129.149950066749 3909.4317698989107 4758.465840653638 3928.1648024973483 1.0852077971286298 0.9983090573375608 0.9907911023131517 0.9852139189998963 0.9253634555744292 0.9943229660574846 0.9588470726155748 1.051165151584685 0.9952310980978883 1.21137123310825 1.0 11.939639742511762 -5.260707601307436 4.520034432250197 0.9924788541741051 1.0913635190764057 0.026893326429882958 0.07205863166593773 0.13179283263604089 6.829730906385064 0.0038344030643881833 0.04132369028311556 5.486462292208385e-06 5.260707601307436 0.09888466490230063 SVSSS(ph)SYRR ddPTM_A549_MK2206_60min_R1 1 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.001)S(0.006)S(0.592)S(0.4)Y(0.001)RR 66.758 0.0021846 623780000.0 1257.5 1349.5 1393.5 914.62 1547.6 1012.7 1212.0 1116.6 1769.8 1870.3 1904.3 True False 1469.7352570767503 1418.183785819458 1591.1192539024614 1138.7019410588523 1319.950090093324 1119.8632418241461 1432.2047116178896 1274.8814694440841 1368.9431257898568 1447.797931020237 1431.4097539937056 1.0267746555283102 0.9907601802088141 1.1115749696850663 0.7955108157407872 0.9221329437015476 0.7823498747997707 1.0005553669184983 0.890647465470387 0.9563600652925804 1.0114489767732877 1.0 10.483221000357418 -6.2192012372399095 24.99992776430252 0.9461384062159315 1.0378089180731802 0.27864429227366283 0.08044190741398534 621.0668240686196 367596.64763600496 0.01135281959008201 0.030036424028854845 6.036688450213022e-07 6.2192012372399095 0.09167051185724873 SVSSSS(ph)YRR ddPTM_A549_MK2206_60min_R1 4 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVS(0.003)S(0.014)S(0.014)S(0.969)YRR;SVSS(0.001)S(0.198)S(0.8)YRR;S(0.002)VS(0.011)S(0.091)S(0.091)S(0.789)Y(0.015)RR;SVS(0.001)S(0.004)S(0.417)S(0.578)Y(0.001)RR 81.33800000000001 0.00080505 827715000.0 5599.87 5718.73 5181.33 5603.75 6377.8 4271.030000000001 4271.63 4388.83 6587.719999999999 8061.999999999999 7914.4 True False 6544.991152323164 6009.7889303292395 5916.12050507531 6976.669001561898 5439.634068620573 4722.98755971974 5047.72987812568 5010.960092728175 5095.611938427139 6240.788600697828 5949.036053672098 1.1001767501952198 1.0102122219648746 0.9944670786494106 1.1727394049419961 0.9143723486535114 0.7939080410858211 0.8484954255756985 0.8423146283732998 0.8565441346219148 1.0490419867006258 1.0 12.53844020631802 -6.863506707018319 9.614189951090239 0.9054827674599066 1.0596372963787373 0.49727778667924316 0.08133627291584337 0.21748793620702803 18.75525384477992 0.012210774147425132 0.023107465600121172 1.3692832417290145e-07 6.863506707018319 0.15415452891883064 SVSSSS(ph)YRR ddPTM_A549_PD325901_60min_R1 3 SVSSSSYRR 9 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 SVSSS(0.013)S(0.987)YRR;SVSS(0.003)S(0.003)S(0.994)YRR;SVSSS(0.047)S(0.953)YRR 138.25 1.7998e-05 1541847000.0 12487.3 12447.8 12951.0 12213.800000000001 14364.5 13218.0 12963.0 12683.8 14054.7 13768.0 14154.300000000001 True False 13755.001503335601 13496.8197915579 13829.932740689614 12968.218686447615 13355.587074834782 13110.35699041393 13456.314058625774 12430.811658751387 13464.029835535805 12898.686130338428 12413.410831500341 1.1080759100013697 1.087277298299698 1.1141122233379 1.0446942313017942 1.0758998679833884 1.056144613948087 1.0840142359970038 1.00140177647282 1.0846358038331743 1.0390928251247957 1.0 13.59961195864274 -14.999999999999998 0.16359611314796327 0.724300035324548 1.0953760295721324 0.3920840089455694 0.028817166854602092 34.592327707518855 0.3621990321946744 3.10584749666537 0.04112006016301455 1.000000000000004e-15 14.999999999999998 0.3710759942475844 SVSSVLS(ph)SLTPAK ddPTM_A549_PD325901_60min_R1 2 SVSSVLSSLTPAK 13 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 SVSSVLS(0.78)S(0.183)LT(0.037)PAK;S(0.004)VS(0.004)S(0.004)VLS(0.365)S(0.33)LT(0.294)PAK 282.12 1.8322999999999994e-98 58565000.0 13721.79 13430.07 14137.76 14115.01 17765.97 15131.31 15056.74 16168.12 15105.61 17056.58 16395.57 True False 15114.816019352109 14561.86913173477 15097.233410857236 14986.862110186434 16518.149556469245 15008.085628129844 15629.732480064265 15845.63416295522 14470.773742873776 15979.624627905854 14379.018830081472 1.0511715853470698 1.0127164658322005 1.049948789222894 1.0422729316435229 1.1487675029615114 1.0437489376349058 1.0869818493711303 1.1019968991072975 1.0063811664673774 1.111315369757765 1.0 13.811677614626396 -8.830955852831487 9.298635686867817 1.0029127858989748 1.0665461364624043 0.0 0.047407462861513684 0.2320892967335738 28.985257036847962 0.006015653054363918 0.006398799521614001 1.475856550324403e-09 8.830955852831487 0.06363335056342945 SVSSVLSS(ph)LTPAK ddPTM_A549_PD325901_60min_R1 2 SVSSVLSSLTPAK 13 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 SVSSVLS(0.005)S(0.983)LT(0.013)PAK;SVSSVLS(0.061)S(0.469)LT(0.469)PAK 246.31 3.1014e-57 70479000.0 11323.23 12039.98 12892.6 12132.67 14771.96 12043.74 12896.89 14978.29 13202.61 13268.02 14127.12 True False 12472.755973878639 13054.631368913482 13767.569365501886 12882.077470607213 13734.428490095468 11945.659774529277 13387.688206399002 14679.536255708803 12647.750215013013 12430.27495286555 12389.573799192123 1.006713885080691 1.053678809336018 1.1112221928408559 1.0397514619467543 1.1085472924816056 0.9641703555055468 1.0805608347295983 1.1848298007366485 1.0208381999256282 1.0032851133003526 1.0 13.59683893923396 -8.975294106648752 24.999490893843006 1.0091932494540539 1.0691257083381303 0.198247359282833 0.05475242720880956 198.77313624806848 201137.3747798674 0.009381715839101988 0.0097240479040429 1.0585366354744714e-09 8.975294106648752 0.05993245888407639 SVSSVLSSLT(ph)PAK ddPTM_A549_MK2206_60min_R1 3 SVSSVLSSLTPAK 13 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 SVSSVLSS(0.003)LT(0.997)PAK;SVSSVLS(0.002)S(0.002)LT(0.997)PAK;SVSSVLS(0.002)S(0.074)LT(0.924)PAK 216.84 1.0047999999999998e-37 83185400.0 8075.5 9570.1 10245.5 9687.2 14149.9 10064.3 10100.199999999999 9551.9 15199.7 15321.5 15248.9 True False 9438.446972980753 10057.17721279793 11698.465960428899 12060.56443487493 12068.468454259191 11129.297545858351 11935.275600893568 10905.911076466902 11756.99221893326 11860.362508756112 11462.177281770004 0.823442766671574 0.8774229333194267 1.020614641777937 1.0522053653852161 1.0528949393806237 0.9709584202260525 1.0412747340661013 0.9514694118204039 1.0257206750441858 1.0347390567426837 1.0 13.484593494783587 -5.670589685377319 3.8119392627841946 1.0134808287308446 0.8349164142552751 0.8118499958037392 0.031194515295323015 0.06196972283722827 1.6673052264210533 0.004060600724994056 0.018065715520720362 2.135061132859854e-06 5.670589685377319 -0.17856441447556948 SVSSVLSSLT(ph)PAK ddPTM_A549_PD325901_60min_R1 2 SVSSVLSSLTPAK 13 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 SVSSVLS(0.001)S(0.024)LT(0.975)PAK;SVSSVLSS(0.009)LT(0.991)PAK 179.46 1.6812e-22 22602600.0 8459.400000000001 8564.6 10000.8 9471.8 10751.099999999999 10157.3 10705.3 10722.5 10908.099999999999 10790.2 10883.7 True False 9318.192060518862 9286.36889946632 10679.514427695827 10056.851573981437 9995.979825281498 10074.582316442078 11112.696049664934 10508.63132586147 10449.670490939561 10108.90493053295 9545.073897458746 0.976230478739375 0.9728964908211657 1.1188508902523124 1.0536169423118815 1.0472396476619004 1.0554745227403957 1.1642336318237985 1.1009481370971113 1.0947710413977678 1.059070368561978 1.0 13.22054065160346 -5.736037726598421 24.919981895625135 1.0624747143996465 0.9745633473462032 0.42904441070986354 0.04299705997916937 208.67758778247008 204717.1162021865 0.0072049379619021706 0.02788205754115916 1.8363788125734207e-06 5.736037726598421 -0.08791136705344327 SVST(ph)MNLSK ddPTM_A549_MK2206_60min_R1 3 SVSTMNLSK 9 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 SVS(0.315)T(0.684)MNLS(0.001)K;S(0.002)VS(0.358)T(0.639)MNLS(0.001)K;S(0.006)VS(0.431)T(0.56)MNLS(0.003)K 74.53 0.0010131 77034700.0 15705.2 17953.5 15389.5 15492.099999999999 22739.4 17096.4 17319.9 16507.5 29243.300000000003 26939.7 28034.1 True False 18355.85380472507 18867.256464401373 17571.96251017719 19287.665195466787 19394.464382701033 18905.529700328145 20466.701637583057 18847.488677098532 22619.739241954187 20854.00305956577 21072.45926820088 0.8710826568033628 0.8953514264408976 0.8338828556519708 0.915302051363914 0.9203702394607541 0.8971676945584272 0.9712535863561054 0.8944133400480735 1.0734266444205782 0.9896330938000782 1.0 14.363071073723455 -8.752910274574523 24.99999999161285 1.0346736939698828 0.900993298667405 0.6665762606613478 0.03782454235121141 74.10003007647117 217197.3544863921 0.006919685308829441 0.00778504502945217 1.7664027225474511e-09 8.752910274574523 -0.13368039530247788 SVST(ph)MNLSK ddPTM_A549_PD325901_60min_R1 2 SVSTMNLSK 9 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 S(0.004)VS(0.426)T(0.542)MNLS(0.029)K;S(0.003)VS(0.446)T(0.546)MNLS(0.005)K 49.159 0.015262999999999999 4913500.0 3332.9 3044.9 3352.9 3025.6 3523.3 4013.3 3398.7 3495.9 3322.4 3354.6 4321.1 True False 3671.2535544486977 3301.504409077479 3580.4479566256045 3212.4844403638444 3275.835562725145 3980.617015405375 3528.039388340001 3426.1715320195035 3182.7710819572235 3142.789983500382 3789.632093709768 0.9687625246108821 0.8711939120838381 0.9448009379508426 0.8477035134086225 0.8644204718876405 1.0503966920727248 0.9309714772038234 0.904090805465376 0.8398628160343469 0.829312689407753 1.0 11.887842079669507 SVST(ph)PPR ddPTM_A549_MK2206_60min_R1 2 SVSTPPR 7 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 S(0.001)VS(0.156)T(0.843)PPR;SVS(0.017)T(0.983)PPR 101.33 0.011632 39513000.0 4177.1 4060.0 4130.6 3381.3999999999996 4932.5 4021.6 3184.8 3815.5 5430.4 5596.6 5796.4 True False 4882.092359709972 4266.636658337902 4716.381191366706 4209.843151796814 4206.935784043238 4447.163042677974 3763.4369352810663 4356.358809478689 4200.423070566866 4332.324172992491 4356.993907498355 1.1205185188136082 0.9792615617375667 1.0824851472135062 0.966226540861511 0.9655592533198478 1.0206952630859636 0.8637691525811452 0.9998542348157584 0.964064481095089 0.9943379001601523 1.0 12.08911738055734 -2.0000000000187903 0.6727814074400813 0.9768420479724822 14.644133387299116 0.4016951442725948 0.04904607846903453 169.73079875340844 0.928515105001402 0.007382915974938772 3478.510641836006 0.009999999999567338 2.0000000000187903 13.667291339326633 SVST(ph)PSEAGSQDSGDGAVGSR ddPTM_A549_MK2206_60min_R1 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ESD3;E7EMU4;E7ERH4;E7ET01;E7ERR6;E7EUM4;Q13409-7;Q13409-5;Q13409 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVS(0.015)T(0.985)PSEAGSQDSGDGAVGSR 290.57 2.279599999999999e-144 15946000.0 971.44 1346.8 1211.6 990.93 1314.3 1631.4 1300.3 1260.6 1882.4 1934.7 2054.2 True False 1135.3953225722769 1415.346367352091 1383.4230986926607 1233.7078944845375 1120.9682110426818 1804.0336651643245 1536.5476786441757 1439.2939104255893 1456.0394055751078 1497.6499262924947 1544.085446964171 0.7353189713720698 0.9166243812055905 0.8959498332249755 0.7989893933073021 0.7259755043003735 1.168350928189394 0.9951182958593286 0.9321335896633101 0.9429785174375093 0.9699268451995494 1.0 10.592536875675156 -7.24001529443697 24.999083360143935 0.983076545302073 0.8238965546788484 0.5665116882738107 0.08032830543730515 545.7008795142048 636761.1797594527 0.011785183429090703 0.02039993997226524 5.7541967257384976e-08 7.24001529443697 -0.15917999062322463 SVST(ph)PSEAGSQDSGDGAVGSR ddPTM_A549_PD325901_60min_R1 2 SVSTPSEAGSQDSGDGAVGSR 21 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ESD3;E7EMU4;E7ERH4;E7ET01;E7ERR6;E7EUM4;Q13409-7;Q13409-5;Q13409 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 S(0.001)VS(0.132)T(0.865)PS(0.001)EAGSQDSGDGAVGSR;SVS(0.016)T(0.965)PS(0.018)EAGSQDSGDGAVGSR 203.81 7.803299999999999e-56 42142000.0 1368.51 1708.8000000000002 1332.26 1719.25 1933.97 1565.6 1307.62 1364.96 1676.5700000000002 1375.08 1419.46 True False 1507.4401277561856 1852.806573034121 1422.6751751301952 1825.4441677999537 1798.1346190343004 1552.8502726730262 1357.3821946571197 1337.7348020095951 1606.109593329227 1288.257214127379 1244.8754186983092 1.2109164540596555 1.4883469825209406 1.1428253412038616 1.4663669475526395 1.4444293718278258 1.2473941161893514 1.0903759318152912 1.0745933142517854 1.2901769680765633 1.0348483027116333 1.0 10.28178565601629 -7.540580962377465 4.732496294031894 1.132256304785034 1.3532272635558869 0.48829890232987483 0.12104424877611977 0.15943678374985726 9.252962516877053 0.020786022568000113 0.031846655339072966 2.8801760693418558e-08 7.540580962377465 0.22097095877085282 SVST(ph)TNIAGHFNDESPLGLR ddPTM_A549_MK2206_60min_R1 1 SVSTTNIAGHFNDESPLGLR 20 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.007)VS(0.114)T(0.756)T(0.123)NIAGHFNDESPLGLR 197.38 8.6327e-55 17984000.0 1248.0 1336.4 1456.2 1462.7 1611.6 1322.2 1098.9 1411.2 2568.3 2405.9 2300.9 True False 1458.6318893294504 1404.4170517740824 1662.7110567152954 1821.0615656630985 1374.5357748736103 1462.114326394673 1298.5559056080024 1611.2419216187454 1986.5841507323375 1862.405519029883 1729.5230283905469 0.843372343348801 0.8120256444812993 0.961369712586351 1.0529270416004435 0.794748466664084 0.8453858678917285 0.7508173550116923 0.931610562663701 1.1486312226677928 1.076831871248915 1.0 10.756158507811298 -8.588453378104504 6.044557328062305 1.0696140671073835 0.8690334124325144 0.541777610463897 0.08398498705402531 0.12769915234632612 8.751600914878585 0.016141999522884656 0.018340904031177697 2.5795658682343276e-09 8.588453378104504 -0.20058065467486907 SVST(ph)TNIAGHFNDESPLGLR ddPTM_A549_PD325901_60min_R1 1 SVSTTNIAGHFNDESPLGLR 20 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.002)VS(0.067)T(0.465)T(0.465)NIAGHFNDESPLGLR 216.58 8.442499999999999e-67 34597000.0 2178.1 2114.2 2545.2 3652.7 3000.7 3099.2 2733.6 3101.6 3427.0 3115.6 4445.2 True False 2399.2191085675267 2292.371053785544 2717.932577530938 3878.3189831164095 2789.9411838530204 3073.961142736485 2837.6286438833163 3039.736154841869 3282.975107713521 2918.8804842883787 3898.4685804444807 0.6154260471926086 0.5880183478416494 0.697179551776984 0.9948314070224534 0.7156505500257045 0.7885047883048502 0.7278829071798717 0.7797257030850037 0.8421191655055523 0.7487248964709073 1.0 11.928691791895782 -10.065031613760064 0.04705980386133421 1.798689215834788 5.0837066661504196e-14 0.15046705491713208 0.11675557360772366 52.27727141441484 0.794320218355908 17.48867960459656 12.826171223874757 8.609310798266357e-11 10.065031613760064 -1.7986892158347372 SVSTPS(ph)EAGSQDSGDGAVGSR ddPTM_A549_MK2206_60min_R1 2 SVSTPSEAGSQDSGDGAVGSR 21 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ESD3;E7EMU4;E7ERH4;E7ET01;E7ERR6;E7EUM4;Q13409-7;Q13409-5;Q13409 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVS(0.011)T(0.142)PS(0.795)EAGS(0.051)QDSGDGAVGSR;SVS(0.025)T(0.197)PS(0.777)EAGSQDSGDGAVGSR 149.34 6.310599999999999e-22 13055500.0 1277.34 920.87 930.29 1173.25 1040.82 902.72 862.27 819.0079999999999 1732.16 1583.46 1868.85 True False 1492.9237640353208 967.7383496462135 1062.2191106658925 1460.6963026691938 887.7167567659172 998.2452312229603 1018.9332975963339 935.1048921068071 1339.8285256911274 1225.7552862392686 1404.7629673639324 1.0627584857513892 0.6888979650867328 0.7561554051066489 1.039816920437632 0.6319334844309974 0.7106147118158936 0.7253417987722042 0.6656673857665478 0.9537755171645392 0.8725708996581996 1.0 10.45611100254049 -8.881924459744548 7.0804023742011175 0.9796904979604919 0.7801406382854578 0.19104558883935097 0.13854103328730885 0.18895979775232266 11.034836406408463 0.022491937943118098 0.023871634549923193 1.3124281601206168e-09 8.881924459744548 -0.19954985967503414 SVSTPS(ph)EAGSQDSGDGAVGSR ddPTM_A549_PD325901_60min_R1 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E9PGG1;E7ETL8;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ESD3;E7EMU4;E7ERH4;E7ET01;E7ERR6;E7EUM4;Q13409-7;Q13409-5;Q13409 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 SVS(0.008)T(0.355)PS(0.638)EAGSQDSGDGAVGSR 131.67 1.605e-17 7676100.0 546.67 629.55 478.69 438.58 698.45 464.4 412.48 407.25 738.78 553.92 601.49 True False 602.1675359628166 682.6043879059168 511.17678199681217 465.6700905125512 649.3932815216925 460.61808037132937 428.1771521177168 399.1270792685555 707.7316457766549 518.9453966674216 527.5105431592617 1.1415270154723998 1.2940108908872185 0.9690361427382539 0.8827692575083942 1.2310527058520477 0.8731921785158772 0.8116940176273311 0.7566238901656498 1.3416445509089707 0.9837630799935421 1.0 9.043056118498011 -11.59241740860296 3.075323464286173 0.997304409696512 1.0966318742887715 0.0 0.19729350543303598 1.1105964578495795 19.19711190559732 0.20564552389995483 0.03206468979985072 2.5561279632071707e-12 11.59241740860296 0.0993274645922595 SVSTS(ph)PSILTAFLK ddPTM_A549_PD325901_60min_R1 2 SVSTSPSILTAFLK 14 0 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 SVST(0.036)S(0.927)PS(0.036)ILTAFLK;SVS(0.005)T(0.349)S(0.641)PS(0.005)ILTAFLK 150.29 1.8909e-13 49218000.0 18025.3 20247.0 20064.5 21844.0 24276.0 24351.0 23398.0 24091.0 24423.0 24166.0 25772.0 True False 19855.21518647548 21953.285746852693 21426.197627640082 23193.25426867655 22570.93750765353 24152.693529548327 24288.423693876888 23610.486105976117 23396.586243270292 22640.154635804647 22602.207382168453 0.8784635434386752 0.971289457514326 0.947969252089238 1.026149962988765 0.9986165123615495 1.0685988815677843 1.0746040545154338 1.0446097457101966 1.035146074348851 1.0016789180363919 1.0 14.464176055897706 -5.340730326415399 0.8733109277086372 1.0267015976684848 0.8215101540780624 0.7192511060057178 0.028705856664633832 0.9124755973061963 0.5496824884366673 0.004816473737388159 0.1737770832094254 4.563201783578025e-06 5.340730326415399 -0.2051914435904224 SVSVAT(ph)GLNMMK ddPTM_A549_MK2206_60min_R1 4 SVSVATGLNMMK 12 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 S(0.009)VS(0.418)VAT(0.573)GLNMMK;S(0.012)VS(0.16)VAT(0.828)GLNMMK;S(0.002)VS(0.126)VAT(0.872)GLNMMK;S(0.001)VS(0.32)VAT(0.68)GLNMMK 118.9 8.760599999999999e-06 57861300.0 16371.100000000002 17767.100000000002 16285.8 16255.699999999999 23148.800000000003 18924.0 18126.4 17332.3 26236.2 24420.5 25725.5 True False 19134.141445033136 18671.36950058013 18595.37132773929 20238.34722974611 19743.642185029945 20926.52511926546 21419.73224807797 19789.2066029426 20293.74259060225 18903.892089226167 19337.148362319527 0.9895017138265344 0.9655699563728467 0.961639791934075 1.0466045380911833 1.0210213944214501 1.0821929235462144 1.107698604092865 1.0233777096887746 1.0494692500858476 0.9775946140053615 1.0 14.239087436676877 -6.26059666029747 24.999018981039693 1.035132547581607 0.9715704315866633 0.4189706873877176 0.0345832653773201 59.178352043813604 1755463.58939598 0.004955965274392884 0.012320266449953389 5.48786399414799e-07 6.26059666029747 -0.06356211599494377 SVSVAT(ph)GLNMMK ddPTM_A549_PD325901_60min_R1 1 SVSVATGLNMMK 12 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 S(0.01)VS(0.487)VAT(0.503)GLNMMK 128.36 4.1273e-08 9655500.0 5115.3 5044.6 6369.8 6212.2 6422.9 6831.1 6544.2 6686.0 7570.8 6376.3 6153.9 True False 5634.601490315167 5469.7261460252375 6802.092932719076 6595.913485070158 5971.777661802098 6775.469786443984 6793.243112123646 6552.642484934466 7252.625604166191 5973.699329813831 5397.0093127862165 1.0440229326575488 1.0134735422943861 1.2603448574016787 1.2221423204595148 1.1064975648002275 1.2554119131112143 1.25870509358388 1.214124731897424 1.343823066412685 1.1068536264448092 1.0 12.397944461411011 -5.747910253534787 24.953167735520932 1.1866229377817523 1.0287481347573075 0.33363088760433524 0.09053905887068467 289.9484478299531 534772.1117619812 0.01735995404977153 0.06647657897016365 1.7868567886434231e-06 5.747910253534787 -0.1578748030244448 SVSVDIRRT(ph)PEEEFSVGDK ddPTM_A549_PD325901_60min_R1 1 SVSVDIRRTPEEEFSVGDK 19 2 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 S(0.063)VS(0.01)VDIRRT(0.927)PEEEFSVGDK 100.62 8.696e-10 10801000.0 2056.7 1795.8 1817.9 1792.3 1917.6 1946.4 1907.5 1902.0 2433.4 2050.7 2235.3 True False 2265.4946699374827 1947.138368360647 1941.2736259207522 1903.0063003913663 1782.9143913608668 1930.5491637268642 1980.0909563240507 1864.0631179098652 2331.1326603764473 1921.2184520253484 1960.3722707341747 1.155645131161255 0.993249291182551 0.9902576438676773 0.9707372057852438 0.9094774589385268 0.9847870185410542 1.0100586433935281 0.9508720082088078 1.1891275423434857 0.9800273553684969 1.0 10.93691192989251 -8.737142222993539 24.999568334165513 1.0893102615234351 0.9917940135589104 0.0662255175851314 0.07746611154264077 261.6401399474874 269203.9241836314 0.014490890911562587 0.016427127096605685 1.8317144732871108e-09 8.737142222993539 -0.09751624796452474 SVT(ph)PAR ddPTM_A549_MK2206_60min_R1 2 SVTPAR 6 0 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62;A0A087WYL6;Q8TEW8-6;Q8TEW8-3;O60218 A0A087WZG6;O60218 PARD3B;AKR1B10 Partitioning defective 3 homolog B;Aldo-keto reductase family 1 member B10 1 SVT(1)PAR;SVT(1)PAR 136.33 0.010546 388550000.0 8576.0 7604.799999999999 5460.700000000001 3643.3 9351.7 7819.1 6617.299999999999 6624.2 9425.5 10335.900000000001 10059.2 True False 10023.419136930577 7991.851837272923 6235.109371930513 4535.908663553953 7976.077318122077 8646.511972101483 7819.5777542813985 7563.200635761685 7290.639299430613 8001.013011405692 7561.223020203474 1.3256346374320862 1.0569522702767549 0.8246165144541292 0.5998908710183621 1.0548660311711635 1.143533519511081 1.0341683790291074 1.0002615470477363 0.9642142917819161 1.0581638697902582 1.0 12.884403892451841 -5.319402268831047 3.610602243640162 0.9687976470352603 1.3464227353802267 0.36109665169662697 0.13828129926619442 0.20095927419942555 4.495895167729402 0.0190358459284547 0.18245711274222803 4.792892973206382e-06 5.319402268831047 0.37762508834496644 SVT(ph)PASTLTK ddPTM_A549_MK2206_60min_R1 2 SVTPASTLTK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.021)VT(0.978)PAS(0.001)TLTK;S(0.39)VT(0.608)PAS(0.001)TLTK 134.98 7.4167e-07 25741000.0 10483.3 12180.3 11391.099999999999 10481.5 13447.8 11394.099999999999 10632.7 10807.3 15142.1 14309.4 14092.6 True False 12252.62474792261 12800.225243732311 13006.529266686985 13049.467970532409 11469.646434192937 12599.81609920854 12564.523958101923 12339.267870968155 11712.438526964957 11076.896601690092 10593.018484026508 1.156669816672053 1.2083642885202275 1.2278397593943475 1.2318932502770619 1.0827552554060318 1.1894453047739069 1.186113663168652 1.1648490833443614 1.1056752657069797 1.0456789647250437 1.0 13.370826123878105 -9.565885899735653 0.4194376926655719 0.9873284968903728 1.1993976896083722 0.691639941288112 0.04064532651236304 0.38406213526423316 0.15256771979730271 0.03247455459676788 0.01484403889322159 2.717153040647308e-10 9.565885899735653 0.2120691927179994 SVT(ph)PASTLTK ddPTM_A549_PD325901_60min_R1 1 SVTPASTLTK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.38)VT(0.62)PASTLTK 134.3 8.2425e-07 22956000.0 10437.0 12029.0 13230.0 14041.0 16859.0 16322.0 16722.0 15940.0 14847.0 14141.0 12546.0 True False 11496.556556686692 13042.72604577917 14127.867358452908 14908.280680575326 15674.8820003926 16189.079043541851 17358.36486062951 15622.064195311903 14223.03222183328 13248.134846681836 11002.921535646641 1.0448639953889338 1.185387535803476 1.284010552350323 1.354938379981746 1.4246109044411528 1.4713436782306764 1.5776141640556887 1.4198105607406566 1.292659606428557 1.2040561048955298 1.0 13.42559902378701 -10.162876463330035 0.8719882053533279 1.0210054709527616 1.3475691633537048 0.24953876399137287 0.1470432229858157 0.3990148017427857 0.5993986229209197 0.0700156462140679 0.02964887096230024 6.872639069698372e-11 10.162876463330035 0.3265636924009432 SVT(ph)PER ddPTM_A549_MK2206_60min_R1 2 SVTPER 6 0 P15121 P15121 AKR1B1 Aldose reductase 1 SVT(1)PER;S(0.003)VT(0.997)PER 92.65299999999999 0.038808999999999996 88294000.0 7887.700000000001 7551.799999999999 6260.9 5723.1 9316.9 5712.0 5684.5 6419.299999999999 9230.0 9940.5 10686.9 True False 9218.950924249928 7936.154363654232 7148.789764447734 7125.259756919719 7946.396352022801 6316.440048681263 6717.30006864017 7329.255433281754 7139.419737281268 7694.93414602292 8033.047786564787 1.1476280446966287 0.9879381493195386 0.8899224745561743 0.8869933238585562 0.9892131309505079 0.7863067936985837 0.8362081550012443 0.912387879173317 0.8887560396717538 0.9579096689668198 1.0 12.971731743429341 -5.328891585163985 2.7808376234941337 0.9219925058546538 1.1725942170570856 0.5616495214969097 0.06138508650325665 0.2457663064885729 2.789063076742836 0.009784200079580646 0.12898306434190082 4.689304286945358e-06 5.328891585163985 0.2506017112024318 SVT(ph)PER ddPTM_A549_PD325901_60min_R1 2 SVTPER 6 0 P15121 P15121 AKR1B1 Aldose reductase 1 SVT(1)PER;S(0.026)VT(0.974)PER 84.49799999999999 0.042888 121318000.0 7237.799999999999 7420.799999999999 7284.200000000001 7501.200000000001 8115.799999999999 7286.1 7225.1 7546.0 8007.8 7898.3 9027.7 True False 7972.576127813256 8046.176859299862 7778.549615452962 7964.532087538756 7545.774205990052 7226.764417298759 7500.055134226429 7395.489110277518 7671.260013874628 7399.599990067689 7917.350131305376 1.0069753131530101 1.0162714450994283 0.9824688167694399 1.0059593115690086 0.9530681453828719 0.9127756506212823 0.9472936032689835 0.9340864036106717 0.968917615951112 0.93460562781094 1.0 12.950801938185664 -6.744742285621469 24.82885828505687 0.9706989258321146 1.0024117905055805 0.3311572043088352 0.027538258338196113 308.5992353889676 458889.76781472587 0.004574400368333699 0.009500868012591698 1.7999386986195859e-07 6.744742285621469 0.0317128646734659 SVT(ph)PPPPPR ddPTM_A549_MK2206_60min_R1 2 SVTPPPPPR 9 0 O95835-2;O95835;H0YG09 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.354)VT(0.646)PPPPPR;S(0.172)VT(0.828)PPPPPR 128.58 5.4108000000000004e-05 28449000.0 4407.0 4811.5 4262.5 4198.700000000001 6377.1 5010.0 4393.1 4486.9 5708.0 6998.799999999999 6180.799999999999 True False 5150.793859194622 5056.384798421879 4866.9865947321405 5227.3816884868065 5439.037037693289 5540.1548746311555 5191.269404792531 5122.9318155549545 4415.147113802972 5417.766219122298 4645.936778598066 1.1086663690565544 1.0883455887119644 1.0475791700723007 1.1251512746723589 1.1707083623584187 1.1924731520567364 1.1173784001337663 1.102669291401943 0.9503244069402219 1.1661299921427548 1.0 12.181753806905315 -8.703412942309582 5.913693917472752 0.9765755366878939 1.1209045763330303 0.04746661834570676 0.06847200402018404 0.0796401092225863 5.657469595968158 0.0074091597801501504 0.008357163231565868 1.9796438163917315e-09 8.703412942309582 0.14432903964513644 SVT(ph)PPPPPR ddPTM_A549_PD325901_60min_R1 2 SVTPPPPPR 9 0 O95835-2;O95835;H0YG09 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.083)VT(0.917)PPPPPR;S(0.156)VT(0.844)PPPPPR 124.81 8.7371e-05 36510000.0 6117.299999999999 6222.8 6891.299999999999 6994.200000000001 8244.0 6754.8 6714.5 6908.9 7581.200000000001 7786.2 8873.400000000001 True False 6738.323792681753 6747.217194918502 7358.985058753328 7426.215849019303 7664.969880256037 6699.791148346805 6970.023971815387 6771.096569572804 7262.588528333161 7294.578003198793 7782.028053117083 0.8658827424790283 0.8670255554033773 0.9456384644881478 0.9542777022044711 0.9849578834640466 0.8609312511618628 0.8956564952273015 0.8700940838758154 0.9332513939504675 0.9373620800913147 1.0 12.925930465695028 -9.935800889212935 0.8438133068399778 0.993547792826478 0.9088980019606016 0.18807879156143248 0.043157195972326805 0.4169067553869904 0.6065897162294732 0.017381476348857988 0.008652300869220786 1.1593087420679687e-10 9.935800889212935 -0.08464979086587643 SVTEQGAELS(ph)NEER ddPTM_A549_PD325901_60min_R1 1 SVTEQGAELSNEER 14 0 P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1 P63104 YWHAZ 14-3-3 protein zeta/delta 1 SVTEQGAELS(1)NEER 55.213 0.010425 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SVTVDS(ph)MDEEKIEEYLK ddPTM_A549_PD325901_60min_R1 1 SVTVDSMDEEKIEEYLK 17 1 P29084 P29084 GTF2E2 Transcription initiation factor IIE subunit beta 1 S(0.015)VT(0.014)VDS(0.946)MDEEKIEEY(0.024)LK 42.277 0.021966 1182800.0 1077.5 1146.5 1134.7 1478.6 1410.7 1882.7 1926.7 1684.8 1136.2 1587.8 1902.8 True False 1186.8870067864243 1243.1195786420997 1211.7075655054048 1569.929763855756 1311.6172986508004 1867.3679154071965 2000.0216228306945 1651.1953422999695 1088.4494652419326 1487.5460370243563 1668.767662843012 0.7112356220783742 0.7449326867493627 0.7261092077018484 0.9407719233851465 0.785979575141246 1.119010127644634 1.1985021446444728 0.989469881916872 0.6522474574966207 0.8914039204775123 1.0 10.704567391551366 -6.250353846603403 22.804686355416358 0.8916895868977467 0.7291764610438124 0.25279211042052174 0.14727727556124673 370.4064610006985 761975.7386833782 0.026074891271072598 0.06812023425098185 5.618833374966027e-07 6.250353846603403 -0.1625131258539343 SVTVVEDDEDEDGDDLLHHHHVSGS(ph)R ddPTM_A549_MK2206_60min_R1 2 SVTVVEDDEDEDGDDLLHHHHVSGSR 26 0 P02545-2;Q3BDU5;Q5TCI8 P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SVTVVEDDEDEDGDDLLHHHHVS(0.441)GS(0.559)R;SVTVVEDDEDEDGDDLLHHHHVS(0.435)GS(0.565)R 119.75 8.096100000000001e-18 28057000.0 0.0 104.3 260.8 105.75 347.63 0.0 139.71 271.4 322.35 158.97 120.57 True False 0.0 109.60842449868062 297.78536162020947 131.6587547472979 296.49408750267645 0.0 165.09349856446806 309.87178112764127 249.33823968717377 123.05856659054002 90.62914143728456 0.0 1.2094170016443302 3.28575728399984 1.4527198719895837 3.2715093931221957 0.0 1.8216381171249747 3.4191185772412154 2.751192781184141 1.3578255805909478 1.0 6.5019031125659215 -7.997277639735479 24.991817256184557 2.0004662848334016 1.6124690430062005 0.04778071805952633 1.1650390729577382 363.1086437343707 3333359.5275793243 0.19423883455894703 0.267545909702521 1.006288154113114e-08 7.997277639735479 -0.3879972418272011 SVTVVEDDEDEDGDDLLHHHHVSGS(ph)R ddPTM_A549_PD325901_60min_R1 2 SVTVVEDDEDEDGDDLLHHHHVSGSR 26 0 P02545-2;Q3BDU5;Q5TCI8 P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 SVTVVEDDEDEDGDDLLHHHHVS(0.433)GS(0.567)R;SVTVVEDDEDEDGDDLLHHHHVS(0.432)GS(0.568)R 128.43 2.4653999999999998e-24 28625000.0 0.0 171.7 170.93 116.54 0.0 0.0 0.0 150.02 237.32 181.29 0.0 True False 0.0 186.16976158120244 182.53033768558996 123.73841111845657 0.0 0.0 0.0 147.02773341158675 227.34626570253073 169.84331846085504 0.0 0.0 SVVASELSALQAAEHT(ph)SPEESR ddPTM_A549_MK2206_60min_R1 1 SVVASELSALQAAEHTSPEESR 22 0 Q8N7W2;A0A3B3IU36;Q8N7W2-2;Q8N7W2-3 Q8N7W2 BEND7 BEN domain-containing protein 7 1 SVVASELSALQAAEHT(0.481)S(0.481)PEES(0.038)R 57.431999999999995 0.0035483000000000003 1085600.0 631.84 620.63 460.74 706.89 848.63 421.49 556.1 730.48 1024.5 764.6 934.49 True False 738.4791449951282 652.217416074939 526.0798600954572 880.0780817334977 723.7976511733632 466.09179203758197 657.136171725007 834.0277770011772 792.4523857903197 591.8763289622374 702.4303423880572 1.051320110239708 0.9285154366447086 0.7489423909379256 1.2529044214426877 1.0304191141753123 0.6635416551810769 0.9355179183902231 1.1873458856656554 1.1281579652385374 0.8426121328273369 1.0 9.456211355074121 -8.216757066983215 23.925629311434232 1.0717220468696362 0.9406847963828885 0.05783251434609915 0.16670907577401098 420.18442932751 224992.36555400403 0.024837843737578445 0.032065404394332024 6.070758170229366e-09 8.216757066983215 -0.13103725048674775 SVVASELSALQAAEHT(ph)SPEESR ddPTM_A549_PD325901_60min_R1 1 SVVASELSALQAAEHTSPEESR 22 0 Q8N7W2;A0A3B3IU36;Q8N7W2-2;Q8N7W2-3 Q8N7W2 BEND7 BEN domain-containing protein 7 1 SVVASELSALQAAEHT(0.519)S(0.445)PEES(0.036)R 82.639 6.2471e-05 1502600.0 448.5 608.24 612.6 575.34 599.19 567.08 770.89 389.81 537.43 642.93 601.27 True False 494.03138983175046 659.4985194184653 654.1747198630578 610.8774451080554 557.1049614932821 562.4618884947746 800.2266407971944 382.03493374997095 514.8436860631685 602.3352900768797 527.3176017645671 0.9368763496203601 1.2506666138425497 1.240570611855147 1.1584620787621565 1.056488460899157 1.066647285454921 1.5175420621640345 0.7244873534878494 0.976344586906151 1.1422628185770403 1.0 9.042528344191359 -8.280682698140085 24.998225337389503 0.9686916311207908 1.1713306324634416 0.2795493935598794 0.16542892830034375 772.4475820455169 1003453.1272444576 0.02424398837016372 0.029331631161692122 5.23983126456373e-09 8.280682698140085 0.20263900134265078 SVVASELSALQAAEHTS(ph)PEESR ddPTM_A549_MK2206_60min_R1 1 SVVASELSALQAAEHTSPEESR 22 0 Q8N7W2;A0A3B3IU36;Q8N7W2-2;Q8N7W2-3 Q8N7W2 BEND7 BEN domain-containing protein 7 1 SVVASELSALQAAEHT(0.184)S(0.772)PEES(0.045)R 100.62 2.7179e-10 1538700.0 483.03 602.91 437.11 443.13 795.32 598.63 518.92 415.7 828.69 758.98 803.33 True False 564.5536550503235 633.5955437631789 499.09877077381014 551.6968698928614 678.3294815540337 661.9766292615659 613.2010469907223 474.6267480278576 640.993038146003 587.5258908654973 603.8409902199043 0.9349376146934424 1.0492754781891152 0.8265400641186191 0.9136459412799167 1.123357792101862 1.096276403860046 1.0155008635094636 0.7860128009113957 1.061526210588269 0.9729811330819635 1.0 9.238024883658017 -6.696763632623668 24.999991890467374 1.0205533421644641 0.9320720166804113 0.12119270700265505 0.09578545360429742 88.95732763105185 34384.77982298865 0.013643877474949297 0.028401991981538647 2.0101865710362395e-07 6.696763632623668 -0.08848132548405285 SVVS(ph)DLEADDVK ddPTM_A549_MK2206_60min_R1 2 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.013)VVS(0.987)DLEADDVK;S(0.011)VVS(0.989)DLEADDVK 295.2 5.785499999999998e-110 427150000.0 29595.0 32857.0 30321.0 25444.0 42542.0 36283.0 31491.0 37105.0 46174.0 44466.0 41019.0 True False 34589.91247171879 34529.28095640603 34620.97373346001 31677.78114222458 36284.12815504663 40122.44297729384 37212.50707389352 42364.747379296736 35715.662724726426 34421.0997170218 30832.850233192145 1.1218525763953568 1.1198861180610091 1.122859984452228 1.0274035939798667 1.1768009730085245 1.3012888096249133 1.2069110313335079 1.3740133350918784 1.1583639674764106 1.1163774823505237 1.0 14.912180639971684 -10.246432260284857 1.0230024568293814 1.0141067247877158 1.1776014932521337 0.16487822064375068 0.0945180105276558 0.43311965578219686 0.8960327811538327 0.0405119406251721 0.01798337767298667 5.6698000015896464e-11 10.246432260284857 0.1634947684644179 SVVS(ph)DLEADDVK ddPTM_A549_PD325901_60min_R1 2 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.146)VVS(0.854)DLEADDVK;SVVS(1)DLEADDVK 237.41 1.787e-50 664610000.0 11111.5 11456.6 10591.8 9934.0 11986.7 10163.900000000001 11914.6 11829.1 10737.599999999999 11455.099999999999 12316.1 True False 12239.531300146027 12422.087888941196 11310.62324166753 10547.600618249073 11144.795543870096 10081.128568230304 12368.016622919282 11593.15932075057 10286.336013009834 10731.823031060403 10801.297778190474 1.133153770175615 1.1500551270814285 1.0471540988811052 0.9765123446134727 1.031801527254734 0.9333256776408567 1.1450491299195789 1.0733117037249904 0.9523240840354916 0.9935679259514212 1.0 13.3989170424638 -2.0000000000001337 0.3635888253421834 0.9869320652698664 3.244675096074344 0.31221491924682065 0.06120141136292061 40.78595564686055 0.49553242370398715 0.01584360916688255 64.88180387361373 0.009999999999996923 2.0000000000001337 2.2577430308044777 SVVS(ph)DLEADDVKGSVPLS(ph)SSPPATHFPDETEITNPVPK ddPTM_A549_PD325901_60min_R1 1 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 2 S(0.15)VVS(0.849)DLEADDVKGS(0.006)VPLS(0.355)S(0.327)S(0.302)PPAT(0.012)HFPDETEITNPVPK 87.646 2.1318000000000003e-08 7874200.0 907.33 876.05 738.45 1208.9 1408.8 1377.2 802.4 1401.4 1015.7 845.57 1229.0 True False 999.4414736589574 949.8778079977426 788.5656576605853 1283.5710073888981 1309.8507480961562 1365.9845398092043 832.9357710901277 1373.4479776229673 973.0136611918949 792.1805658941213 1077.840791272894 0.9272626177736792 0.8812784000093081 0.7316160828625864 1.190872546095647 1.2152543851576318 1.2673342397776783 0.7727818225421385 1.2742586741414481 0.9027434005747716 0.734969925343596 1.0 10.073928376848936 -6.24937166008065 24.93313944860567 1.0167949190899024 0.8501749871845798 0.17570091012399336 0.18388989404343817 1064.9033826892928 2200194.6876318017 0.023496287025450622 0.06163301778654499 5.631555129115718e-07 6.24937166008065 -0.16661993190532254 SVVS(ph)FDK ddPTM_A549_MK2206_60min_R1 2 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.094)VVS(0.906)FDK;S(0.195)VVS(0.805)FDK 101.65 0.010886 26441000.0 6214.799999999999 6123.2 5556.4 4800.8 8124.9 6849.9 5530.8 7787.4 9694.0 7033.7 7261.8 True False 7263.706302728094 6434.844725698188 6344.381070960624 5976.996215516105 6929.7379729899485 7574.751871404376 6535.674768165198 8891.287797912286 7498.324478137002 5444.782284883195 5458.494644515827 1.330716026263023 1.178868011194864 1.1622950069823466 1.0949898469757076 1.2695327969135752 1.3876997899072343 1.1973401448202607 1.6288900836140605 1.3736982385190395 0.9974878862166864 1.0 12.414287421094425 -10.8218907453713 1.149140220948708 1.0050467641822578 1.292391954095382 0.39772337482894204 0.13824009740314117 0.4238009072660399 1.0203245289533347 0.09285400711661874 0.02469282739954925 1.50698612811071e-11 10.8218907453713 0.2873451899131243 SVVS(ph)FDK ddPTM_A549_PD325901_60min_R1 2 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.016)VVS(0.984)FDK;S(0.004)VVS(0.996)FDK 95.50200000000001 0.011887 28055000.0 5805.299999999999 4890.5 5312.5 4820.700000000001 5471.4 4800.0 4690.5 4537.6 4797.200000000001 5961.8 4742.9 True False 6394.649782364019 5302.639598211241 5673.03819665768 5118.463690395949 5087.107739305299 4760.91039143493 4868.999544240088 4447.094008321666 4595.590366712375 5585.37093055285 4159.553367720268 1.5373404827520565 1.274809848423093 1.363857533523343 1.230532039838025 1.222993742256851 1.1445724986681076 1.170558258015246 1.0691277680995328 1.1048278409831018 1.3427814086717755 1.0 12.022212911882393 -2.0000000000000275 0.1970260014563366 0.9969933815346029 3.263986048733278 0.4504245885166248 0.10766270818986022 9.108075256245439 0.10045791581904705 0.035283117505028216 6.42562926970053 0.009999999999999365 2.0000000000000275 2.266992667198675 SVVS(ph)FDKVK ddPTM_A549_MK2206_60min_R1 3 SVVSFDKVK 9 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 SVVS(1)FDKVK;SVVS(1)FDKVK;SVVS(1)FDKVK 125.74 5.8342e-05 95216700.0 16202.1 17100.9 16438.3 14641.2 19931.1 15096.9 15430.3 17449.6 21384.0 20364.3 21452.9 True False 18936.61837668645 17971.262766150398 18769.49812086461 18228.29465726845 16999.261592568513 16694.443937488828 18233.78577696163 19923.134237158778 16540.558143231046 15763.990486379402 16125.552860080637 1.1743236675974502 1.1144587055144557 1.1639599760532335 1.130398121257177 1.054181629620326 1.0352788572487646 1.1307386441366607 1.2355008482517944 1.0257358793680662 0.9775782959605499 1.0 13.977061003330215 -8.965508510316388 24.349463082947537 1.01135398539656 1.125211755370246 0.5393252718612765 0.05278866667421697 80.29446973282744 56684.738411936945 0.009328779343252375 0.009883681796586646 1.082658499438337e-09 8.965508510316388 0.11385776997368602 SVVS(ph)FDKVK ddPTM_A549_PD325901_60min_R1 4 SVVSFDKVK 9 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.01)VVS(0.99)FDKVK;SVVS(1)FDKVK;S(0.001)VVS(0.999)FDKVK;SVVS(1)FDKVK 138.71 3.5423e-05 302064200.0 47182.1 46526.799999999996 50168.0 44575.6 56580.9 43359.5 45914.4 44335.4 45359.0 42777.899999999994 49887.700000000004 True False 51971.99205837376 50447.776721818766 53572.70216469126 47328.933573467264 52606.85277750838 43006.394607796385 47661.69761732375 43451.09566655155 43452.71897017145 40076.89609347788 43751.82916418613 1.1878815823525934 1.1530438312077185 1.224467712278969 1.0817589681989626 1.2023920778281585 0.9829622081949448 1.0893646854961236 0.9931263788650749 0.9931634813965785 0.9160050415968338 1.0 15.417055713544377 -7.294580217139248 0.9620655407355004 0.996668314583018 1.1818294991206606 0.7005510610572028 0.054828842508307406 0.18546739871597975 0.3390191060837779 0.007410763278971867 0.016899978119148354 5.074809951864891e-08 7.294580217139248 0.18516118453764263 SVVS(ph)FDKVKEPR ddPTM_A549_MK2206_60min_R1 4 SVVSFDKVKEPR 12 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.065)VVS(0.935)FDKVKEPR;SVVS(1)FDKVKEPR;S(0.058)VVS(0.942)FDKVKEPR;S(0.037)VVS(0.963)FDKVKEPR 85.469 0.00012919999999999997 215863000.0 15846.1 17327.800000000003 17622.6 16163.7 22689.8 16283.0 15969.7 15870.599999999999 24331.9 24279.600000000002 24626.2 True False 18520.534280050793 18209.711006982143 20121.749669050234 20123.807225616067 19352.160476996316 18006.056252219372 18871.18777485495 18120.306151674085 18820.76350006002 18794.821497085475 18510.834891456067 1.0005239843935512 0.9837325606197853 1.0870255062529735 1.0871366604271582 1.0454504397275228 0.9727306389908063 1.019467132925766 0.9789026944450661 1.016743091838986 1.0153416421946742 1.0 14.17608234588705 -7.2257725337881595 24.095231399427515 1.0044384742108297 1.0427501339784624 0.2745457770489378 0.032160383238790134 447.3035473672345 302181.8333321979 0.004872560239104588 0.008439417929648507 5.946035067887243e-08 7.2257725337881595 0.03831165976763273 SVVS(ph)FDKVKEPR ddPTM_A549_PD325901_60min_R1 4 SVVSFDKVKEPR 12 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.27)VVS(0.73)FDKVKEPR;S(0.001)VVS(0.999)FDKVKEPR;S(0.064)VVS(0.936)FDKVKEPR;SVVS(1)FDKVKEPR 131.56 2.1180000000000002e-08 316356000.0 27638.1 27327.7 29779.1 29873.9 31643.5 33906.3 33755.5 32371.8 30770.5 32573.7 30796.5 True False 30443.899565906137 29630.70118557151 31800.088802275495 31719.142954450483 29420.969724148705 33630.17833439794 35040.08402421834 31726.119053814175 29477.322892296168 30516.991022937596 27008.725735098178 1.1271875565141494 1.097078828382712 1.177400559884648 1.1744035340856922 1.0893135060391164 1.2451597555635547 1.2973616144608893 1.1746618246630454 1.0913999861159691 1.1298937729328113 1.0 14.72113795501199 -9.255002287567446 1.3518186693650185 1.0258623915910816 1.1727714569388703 0.25065790714903236 0.06698855229248477 0.22868273050504515 0.8664154494167537 0.014856722388435356 0.012947298562760383 5.559013291532247e-10 9.255002287567446 0.1469090653477887 SVVSDLEADDVKGSVPLS(ph)SSPPATHFPDETEITNPVPK ddPTM_A549_MK2206_60min_R1 1 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.002)VVS(0.006)DLEADDVKGS(0.021)VPLS(0.302)S(0.302)S(0.302)PPAT(0.047)HFPDET(0.015)EIT(0.002)NPVPK 49.059 0.0024077 5174000.0 272.33 306.09 352.36 150.37 379.52 279.87 0.0 372.34 784.23 610.01 641.0 True False 318.29264617074466 321.6686735839038 402.3299463976113 187.21065675036587 323.69311074710384 309.4856576373295 0.0 425.1203352434269 606.6031571579725 472.20831732965524 481.8220092999871 0.6606021311338074 0.6676089248210946 0.8350177838121894 0.38854733311654654 0.6718105534809004 0.6423236208884777 0.0 0.8823182151040818 1.2589776835625943 0.98004721290275 1.0 8.912356486179487 -8.517447752608915 24.452813423479583 1.1195767966069665 0.5601913324239646 0.5415326196368679 0.2159189079841604 93.05041176413675 418956.7943492525 0.036200858823148795 0.041670821273933276 3.0377515238175104e-09 8.517447752608915 -0.559385464183002 SVVSDLEADDVKGSVPLSS(ph)SPPATHFPDETEITNPVPK ddPTM_A549_PD325901_60min_R1 2 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 SVVSDLEADDVKGS(0.002)VPLS(0.145)S(0.671)S(0.149)PPAT(0.027)HFPDET(0.007)EITNPVPK;SVVSDLEADDVKGS(0.001)VPLS(0.111)S(0.372)S(0.372)PPAT(0.111)HFPDET(0.026)EIT(0.008)NPVPK 86.47 1.6625e-07 506860000.0 4057.1 4534.8 4742.2 4638.799999999999 4653.1 5960.5 4400.2 5642.7 4943.4 6059.2 5637.0 True False 4468.973805320837 4916.963510881983 5064.0342091651855 4925.328140520823 4326.282308323552 5911.959664197477 4567.652018881828 5530.151921887483 4735.6460891365705 5676.621077930462 4943.684735887149 0.90397629381172 0.9945948768109762 1.0243440833523216 0.9962868596306167 0.8751129045341918 1.195860978205474 0.9239367522213485 1.1186295682940817 0.9579183022654364 1.1482570959112317 1.0 12.271371028617487 -5.262208298874406 7.229247805347929 0.996335536779075 0.9028059358001717 0.05311589633982805 0.09537343230025554 0.1827916300546655 81.159960148204 0.010143473185529198 0.0837495583180069 5.4675366278768965e-06 5.262208298874406 -0.0935296009789034 SVVSDLEADDVKGSVPLSSS(ph)PPATHFPDETEITNPVPK ddPTM_A549_MK2206_60min_R1 2 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 SVVSDLEADDVKGSVPLS(0.016)S(0.142)S(0.842)PPAT(0.001)HFPDETEITNPVPK;SVVSDLEADDVKGSVPLS(0.02)S(0.164)S(0.815)PPATHFPDETEITNPVPK 338.79 2.817899999999998e-280 467630000.0 14029.8 17159.2 16538.7 15059.400000000001 22725.0 11331.3 11682.8 12221.400000000001 29210.0 33123.0 32083.0 True False 16397.68724432238 18032.529987130983 18884.136350568082 18748.95367604217 19382.18260362546 12530.370644891816 13805.413535387355 13953.820876467786 22593.981638785015 25640.49129507743 24115.905654245667 0.6799532009877276 0.7477442583192521 0.7830573158360106 0.7774517758051258 0.8037095053161802 0.519589470308191 0.5724609199139439 0.5786148393730832 0.936891276766431 1.0632190912790105 1.0 14.557697369966688 -8.851149329629816 6.32236741791315 0.9720674725290644 0.6867705015252472 0.6911869119547372 0.09404571804120118 0.09811165852133913 5.693631136324521 0.017495161424842025 0.018575970800216935 1.4088043059709502e-09 8.851149329629816 -0.28529697100381723 SVVSDLEADDVKGSVPLSSS(ph)PPATHFPDETEITNPVPK ddPTM_A549_PD325901_60min_R1 2 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 SVVSDLEADDVKGSVPLS(0.019)S(0.161)S(0.819)PPATHFPDETEITNPVPK;SVVSDLEADDVKGSVPLS(0.018)S(0.147)S(0.828)PPAT(0.007)HFPDETEITNPVPK 359.54 0.0 523090000.0 14176.699999999999 14332.5 15548.8 16892.5 19863.0 24719.7 18562.2 22572.5 19133.1 21010.2 21655.3 True False 15615.90814766506 15540.35007491313 16604.035070530055 17935.911359348956 18467.891403629994 24518.390958990407 19268.5946786256 22122.27377971632 18329.00234414752 19683.612386376848 18991.835384257047 0.8222432340904554 0.818264783813103 0.8742722719834484 0.9444011595749519 0.9724121460603345 1.2909963920240433 1.0145725407138884 1.1648307460612362 0.9650990530036412 1.0364249683152391 1.0 14.213091714832236 -6.3695661424476935 1.8910617670446377 1.0220031980110544 0.8248472925913527 0.49813642124126234 0.09505551094375185 0.2766923477676971 1.9020398681452388 0.014836230961240416 0.0456298134449478 4.2700588208427914e-07 6.3695661424476935 -0.19715590541970174 SVWGSLAVQNS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SVWGSLAVQNSPK 13 0 P18615-4;P18615;P18615-3 P18615-4 NELFE Negative elongation factor E 1 SVWGSLAVQNS(1)PK;SVWGSLAVQNS(1)PK 175.01 5.0206e-44 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SVWGSLAVQNS(ph)PK ddPTM_A549_PD325901_60min_R1 3 SVWGSLAVQNSPK 13 0 P18615-4;P18615;P18615-3 P18615-4 NELFE Negative elongation factor E 1 SVWGSLAVQNS(1)PK;SVWGSLAVQNS(1)PK;SVWGSLAVQNS(1)PK 72.417 0.00053024 6688900.0 1653.79 1854.05 1876.05 2193.6000000000004 2094.35 2283.7 1924.76 2082.0 2477.1 2143.02 2451.6000000000004 True False 1821.6815433441498 2010.29730028904 2003.370034605108 2329.0936899729413 1947.2500811152645 2265.1023043583227 1998.0077950690857 2040.472876702596 2372.99610134729 2007.70935146992 2150.0687419728442 0.8472666514246538 0.9349921056219097 0.9317702245961078 1.0832647554495531 0.905668755189902 1.0535022718761666 0.9292762394358464 0.9490268087104573 1.1036838288109307 0.933788446981328 1.0 11.070167071043295 -2.995815414995584 0.3472132277081409 1.0389795307587892 1.140403718434501e-18 0.1552109544776109 0.07003738113140183 20.171938897632483 0.47391050591540773 0.018141359242992105 12.336256802328133 0.0010096819326134725 2.995815414995584 -1.0389795307587892 SVYATMGDHENRS(ph)PVKEPVEQPR ddPTM_A549_MK2206_60min_R1 1 SVYATMGDHENRSPVKEPVEQPR 23 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SVYAT(0.002)MGDHENRS(0.998)PVKEPVEQPR 120.13 4.8585e-16 16834000.0 1170.6 1640.1 1361.4 1246.1 1350.5 1050.6 1025.3 1361.7 2298.9 2545.3 2533.5 True False 1368.168661577767 1723.5740845665018 1554.466991218378 1551.394555939554 1151.8432389965321 1161.7737946681618 1211.583738301833 1554.7251450313545 1778.2028205889387 1970.3149622123778 1904.3620289571245 0.7184393727525694 0.9050663993286893 0.8162665331389969 0.8146531659156929 0.604844678418268 0.610059314879523 0.6362150262811772 0.816402092349405 0.933752507952874 1.034632560538592 1.0 10.895092053083287 -8.705453061001455 2.6646421176581727 0.9719298784356594 0.7329708819762184 0.6100401944902382 0.09061695512130616 0.15266416382883613 2.1556628024583233 0.017781778831263462 0.019653877336091967 1.9703661549286623e-09 8.705453061001455 -0.23895899645944096 SVYATMGDHENRS(ph)PVKEPVEQPR ddPTM_A549_PD325901_60min_R1 6 SVYATMGDHENRSPVKEPVEQPR 23 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SVYAT(0.001)MGDHENRS(0.999)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR 153.12 9.7636e-29 119808000.0 12518.8 13799.400000000001 12298.0 14525.2 17266.1 17253.2 15098.199999999999 17336.600000000002 16610.600000000002 17936.7 20712.199999999997 True False 13789.699360146527 14962.32386699851 13132.616233881618 15422.388614877345 16053.388700811349 17112.695659480232 15672.770263052042 16990.807912700402 15912.514246917486 16804.173700903622 18164.730705453563 0.759146919585572 0.8237019369908082 0.7229733513163967 0.8490293010645685 0.8837669526249388 0.9420836420295798 0.8628132460200268 0.9353735096991712 0.8760115690644454 0.9250989719246725 1.0 14.1488523573157 -2.0000000000028066 0.08952369317998357 1.078925377459066 0.20109412320225858 0.6562580030667555 0.04547006317319913 55.52014888346398 0.34701592574210455 0.43877667790903624 6.002565863399174 0.009999999999935375 2.0000000000028066 -0.8778312542568073 SVYFKPSLT(ph)PSGEFR ddPTM_A549_MK2206_60min_R1 1 SVYFKPSLTPSGEFR 15 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 SVYFKPS(0.033)LT(0.957)PS(0.011)GEFR 129.2 1.1924000000000001e-09 10941000.0 5111.3 5224.5 5449.6 5299.9 7269.0 5898.7 5180.5 6225.2 7713.7 7286.0 7258.2 True False 5973.962480712836 5490.404734356248 6222.435225021068 6598.3757379215485 6199.739729186071 6522.896518759834 6121.729792521846 7107.6411638754325 5966.559266247726 5640.087539653236 5455.788623870769 1.0949768938215267 1.0063448408418947 1.140519850383496 1.2094265729158946 1.136359957579787 1.1955918691974496 1.1220613947060518 1.3027706265556727 1.0936199471039212 1.0337804355132276 1.0 12.413572035109077 -9.6128919895261 1.3089522124913877 1.0209801796346485 1.1469695141152958 0.31887283097528907 0.0720605715704021 0.3152067519136071 1.1022535290381448 0.01933729223708789 0.014267107307136106 2.4384171853809565e-10 9.6128919895261 0.1259893344806473 SVYFKPSLT(ph)PSGEFR ddPTM_A549_PD325901_60min_R1 1 SVYFKPSLTPSGEFR 15 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 SVYFKPS(0.04)LT(0.954)PS(0.007)GEFR 131.98 9.0055e-10 27954000.0 7068.3 7481.8 8087.6 8031.9 9568.4 7977.0 8162.5 8656.6 8697.7 8476.7 9164.4 True False 7785.8686125925615 8112.31754337938 8636.473170689627 8528.012221231604 8896.348593188004 7912.037956765921 8473.128404191384 8483.937322028678 8332.165916066499 7941.479715357327 8037.236897918068 0.9687245394756723 1.009341599160871 1.0745574978543662 1.0610626922594086 1.1068914237792937 0.9844226389314743 1.0542340000437498 1.0555788549950942 1.0366953247607804 0.9880858081232438 1.0 12.97248389069128 -10.328810820778468 0.7732497958335968 1.0004928659238013 1.0411661839081596 0.1628134691498362 0.0380830784368091 1.0243273656497882 1.1424466408715295 0.023069366723087015 0.007533230033149813 4.6901764232784384e-11 10.328810820778468 0.04067331798435836 SVYFKPSLTPS(ph)GEFR ddPTM_A549_MK2206_60min_R1 1 SVYFKPSLTPSGEFR 15 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 SVYFKPS(0.062)LT(0.419)PS(0.519)GEFR 76.061 0.00017779 8835600.0 2334.4 2313.2 2936.9 2354.4 2854.8 2360.9 2216.2 2352.0 2750.8 3131.4 3063.3 True False 2728.3896493995753 2430.9319995239493 3353.3965818343295 2931.2281056930337 2434.8627017306917 2610.7288709614168 2618.854853042545 2685.403202697908 2127.7481921249505 2424.0145651482476 2302.5980672209826 1.1849178926361572 1.0557344045970878 1.456353425103653 1.2730090185608243 1.0574414772567493 1.1338187537490287 1.1373478030420023 1.1662492212281472 0.9240640919554582 1.0527302179462885 1.0 11.169046886399117 -8.73037914299808 8.16346882004673 0.9641447612450603 1.1839588383448678 0.37178755557333265 0.10883439653548449 0.14636389496005078 32.87246043736935 0.01852689962485588 0.02086865932564914 1.8604622271884398e-09 8.73037914299808 0.2198140770998075 SVYFKPSLTPS(ph)GEFR ddPTM_A549_PD325901_60min_R1 1 SVYFKPSLTPSGEFR 15 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 SVYFKPS(0.011)LT(0.384)PS(0.605)GEFR 91.889 7.9273e-06 22345000.0 6141.8 5833.6 6376.1 6492.5 7274.7 6624.8 5476.2 6168.8 6429.4 6522.4 6646.6 True False 6765.311014645809 6325.217945020982 6808.820488604047 6893.526979462668 6763.750168352574 6570.849825245443 5684.599787691621 6045.758444670018 6159.194676840771 6110.574550880253 5829.110336268847 1.160607815664751 1.0851086323868915 1.1680719862582498 1.1826036190413138 1.160340048166249 1.1272474607937126 0.9752088157127377 1.0371665821889118 1.056626881553113 1.0482859644738802 1.0 12.509059994606613 -7.644376742683025 5.955442782447872 1.0250118137104982 1.1495855521921459 0.7973994558277705 0.031221786994484253 0.07661508779736702 3.7364749419610734 0.005208743578677235 0.007747260759938768 2.267896638605871e-08 7.644376742683025 0.12457373848164766 SVYRGS(ph)LTQR ddPTM_A549_MK2206_60min_R1 3 SVYRGSLTQR 10 1 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 SVYRGS(0.888)LT(0.112)QR;SVYRGS(0.987)LT(0.013)QR;SVYRGS(1)LTQR 170.18 5.4269e-11 335109000.0 11559.699999999999 14087.9 13230.6 11851.6 16000.0 13145.7 11245.1 12108.1 19196.399999999998 17848.9 19098.1 True False 13510.694752469271 14804.913935713925 15106.898027041185 14755.242532038541 13646.421195071836 14536.76924859057 13288.18911106792 13824.460254501093 14848.44605035168 13816.821093400584 14355.514689254422 0.9411501464717579 1.03130499018582 1.0523410935833042 1.0278448980365245 0.9506048017412176 1.0126261275377206 0.9256504833654324 0.9630069387097043 1.034337421664598 0.9624747974897014 1.0 13.809317436066236 -8.774701940154177 24.875068889577754 1.0162148910063573 0.9904653577557886 0.0 0.04246918483775769 454.71099512345836 852846.3288376838 0.007172046527132199 0.007657273994491594 1.679956590480231e-09 8.774701940154177 -0.025749533250568724 SVYRGS(ph)LTQR ddPTM_A549_PD325901_60min_R1 6 SVYRGSLTQR 10 1 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-2;Q9BV36-3 Q9BV36;Q9BV36-2;Q9BV36-3 MLPH Melanophilin 1 SVYRGS(1)LTQR;SVYRGS(1)LTQR;S(0.003)VYRGS(0.937)LT(0.06)QR;SVYRGS(0.996)LT(0.004)QR;SVYRGS(0.999)LT(0.001)QR;SVYRGS(0.999)LT(0.001)QR 166.45 4.3480999999999997e-10 590341000.0 38701.9 37682.2 41634.5 40761.2 46583.4 43748.100000000006 43240.2 43955.8 45036.200000000004 44901.799999999996 48720.0 True False 42630.88839716707 40857.81123969242 44460.06753858712 43278.92674859816 43311.54268800573 43391.82997823634 44885.72947294532 43079.06708634198 43143.48513160423 42066.69268501089 42727.748861525935 0.99773307822341 0.9562359901549295 1.0405431768164377 1.012899764245912 1.0136631075129134 1.015542150813107 1.0505053663934665 1.0082222498066682 1.0097298893846627 0.9845286448706336 1.0 15.382885689269969 -5.753145101941127 24.999919046793213 1.0116683019588153 0.9769845417061364 0.35563452220454606 0.01933421233158528 146.4001303069993 441256.6199069337 0.00243991027278772 0.009121862620295337 1.765447869115011e-06 5.753145101941127 -0.03468376025267894 SWDSS(ph)SPVDRPEPEAASPT(ph)TR ddPTM_A549_PD325901_60min_R1 2 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 S(0.104)WDS(0.262)S(0.298)S(0.336)PVDRPEPEAAS(0.297)PT(0.527)T(0.177)R;S(0.063)WDS(0.284)S(0.327)S(0.327)PVDRPEPEAAS(0.25)PT(0.583)T(0.166)R 78.043 0.00011187 67609000.0 25091.1 21268.4 15535.5 18432.8 19847.2 18533.5 17236.4 17614.9 19887.9 22494.7 36631.0 True False 27638.330000908427 23060.76270945629 16589.83245255065 19571.35219207385 18453.201141122965 18382.569320762334 17892.340634119988 17263.557000878278 19052.08072503524 21074.380803030468 32125.619223041 0.8603205376065025 0.7178309171054591 0.5164050640509417 0.6092132281153655 0.5744076406125127 0.5722090271050111 0.556949284304762 0.5373766301910402 0.5930494473199379 0.6559992091270131 1.0 14.971436642148594 -10.596160738148383 0.8286247062424227 1.0063701867616748 0.6088111351656877 0.10792978289816302 0.13569810201031185 0.28933630685811346 0.34662693308555154 0.07130487029509465 0.018416745849958636 2.5341905193793416e-11 10.596160738148383 -0.39755905159598703 SWDSS(ph)SPVDRPEPEAASPTTR ddPTM_A549_MK2206_60min_R1 1 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SWDS(0.14)S(0.463)S(0.397)PVDRPEPEAASPTTR 85.84899999999999 7.199099999999999e-06 144560000.0 2616.2 3288.3 2456.2 2581.6 3898.1 2404.5 2424.5 2509.6 3455.5 3475.0 3839.4 True False 3057.7506000510484 3455.660424535105 2804.5260936026007 3214.09211589243 3324.6946537818453 2658.942594022076 2865.0002667636727 2865.343485327667 2672.834767299611 2689.9950865076844 2885.9710179506537 1.0595222824595019 1.1973995591227355 0.9717790220894569 1.1136952158912452 1.152019418456507 0.9213337824543393 0.9927335544755843 0.9928524810212286 0.9261474736491317 0.9320935899134105 1.0 11.494841096456266 -7.2638260065169495 24.998361877433798 0.96618749983925 1.0981177947298932 0.5780899532238193 0.05861466633039087 120.31088353576719 1260177.4071951145 0.008456517676459281 0.013925970606629888 5.4472084325845124e-08 7.2638260065169495 0.13193029489064323 SWDSSS(ph)PVDRPEPEAASPT(ph)TR ddPTM_A549_MK2206_60min_R1 2 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 S(0.077)WDS(0.112)S(0.378)S(0.432)PVDRPEPEAAS(0.27)PT(0.546)T(0.183)R;S(0.127)WDS(0.165)S(0.189)S(0.519)PVDRPEPEAAS(0.306)PT(0.491)T(0.203)R 60.23 0.0010949999999999998 41443000.0 7911.4 9013.0 8474.1 8318.5 12432.3 9455.6 9165.3 8821.2 14621.0 14707.1 17997.3 True False 9246.650904840559 9471.723202364417 9675.854804086719 10356.532873431652 10603.525138968218 10456.185315880706 10830.516372435173 10071.632113792002 11309.366844939257 11384.755895475442 13528.073709788845 0.6835157098641271 0.7001531338131849 0.715242614111817 0.7655585780803159 0.7838163338284859 0.7729249219210466 0.800595606202106 0.7444986130216175 0.8359924027288421 0.8415651880457667 1.0 13.723668805177068 -14.999999999984277 0.10247964644781414 1.8510070432092398 0.587417959228345 0.5665795403319697 0.05500629897916619 16.567231070380302 0.12166601642390569 2.9511759859920392 0.16875372929950128 1.0000000000362025e-15 14.999999999984277 -1.2635890839808948 SWDSSS(ph)PVDRPEPEAASPTTR ddPTM_A549_MK2206_60min_R1 1 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SWDS(0.004)S(0.052)S(0.944)PVDRPEPEAASPTTR 138.12 1.2248e-18 109940000.0 4229.9 4034.4 3656.7 3815.8 5045.6 4185.1 4041.4 4285.6 6409.0 5846.1 5885.4 True False 4943.80370887391 4239.733727684346 4175.275045385811 4750.671171297774 4303.398923865902 4627.964504155454 4775.670067271071 4893.0969240995555 4957.37173306995 4525.461949707219 4423.892751223311 1.1175234091076984 0.958371725108381 0.9438011453218996 1.0738667138763933 0.9727629411169406 1.046129453042394 1.079517595888934 1.1060613806124704 1.1205903967041513 1.0229592361740283 1.0 12.11110069529036 -7.49465309327026 10.665405987229452 1.0643315239399627 1.0096781942433244 0.16380214202527144 0.05646634535104877 1.106666663866821 413.50397803862586 0.009458603499027789 0.014961597295257669 3.201451351175462e-08 7.49465309327026 -0.054653329696638275 SWDSSS(ph)PVDRPEPEAASPTTR ddPTM_A549_PD325901_60min_R1 1 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SWDS(0.063)S(0.195)S(0.739)PVDRPEPEAAS(0.002)PTTR 95.68 3.4708e-07 159750000.0 9375.0 9087.3 8131.8 9134.2 10396.0 8918.9 8087.8 8557.2 11520.0 11263.0 11990.0 True False 10326.743098489773 9853.118662882121 8683.672848485812 9698.398788726667 9665.820824253004 8846.267435451871 8395.58565481398 8386.51993300647 11035.85446187912 10551.85225784439 10515.306010872258 0.9820677674822281 0.9370263359615525 0.8258126619907555 0.922312558350565 0.9192144112838054 0.8412753205950744 0.798415723340186 0.7975535780257142 1.0495038803881354 1.0034755286184105 1.0 13.360203214777862 -8.774767927714166 24.999285808320106 1.023376844016996 0.877169733532252 0.5379511881773906 0.05759112526997566 125.37464378978021 235154.29757703026 0.010616593252572243 0.011333661938763359 1.6797013539541398e-09 8.774767927714166 -0.14620711048474389 SWDSSSPVDRPEPEAAS(ph)PTTR ddPTM_A549_PD325901_60min_R1 2 SWDSSSPVDRPEPEAASPTTR 21 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(0.002)WDS(0.011)S(0.011)S(0.011)PVDRPEPEAAS(0.913)PT(0.039)T(0.012)R;SWDSSSPVDRPEPEAAS(0.952)PT(0.048)TR 183.63 6.613899999999999e-45 169609500.0 12620.3 12361.5 11116.400000000001 13137.3 13055.5 12205.4 11854.0 11584.2 15118.8 13748.3 18360.4 True False 13901.50356542617 13403.246987688019 11870.825752343602 13948.761184026933 12138.52671902993 12106.00326908748 12305.1104567577 11353.144043370901 14483.409413043233 12880.22999170045 16102.18719616504 0.8633301424254344 0.8323867325850112 0.7372182181046066 0.8662649995367725 0.7538433488042474 0.751823533139069 0.7641887593809824 0.7050684422594969 0.8994684533597187 0.7999056174659338 1.0 13.974969045699568 -9.112912685291537 2.0463984746274355 0.9650901852996476 0.7849228584619299 0.21913025698266597 0.07311013077331698 0.12481238109297528 1.0759179834392492 0.01130983495175917 0.010828717371828162 7.71058474438335e-10 9.112912685291537 -0.18016732683771775 SWDYT(ph)PNR ddPTM_A549_PD325901_60min_R1 2 SWDYTPNR 8 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SWDYT(1)PNR;S(0.025)WDY(0.01)T(0.965)PNR 72.275 0.0060746 16926300.0 7357.8 7731.299999999999 7173.6 8193.0 7321.1 6439.2 6385.4 7004.3 8843.7 8183.5 9899.900000000001 True False 8104.758439473927 8382.843783999713 7660.443634361132 8699.063002346957 6806.891192423879 6386.761290109952 6628.399891224949 6864.593741732949 8472.030043795176 7666.792413395156 8682.275060636714 0.933483261342283 0.9655123484863377 0.8823083328805935 1.0019335878664286 0.7839985654548817 0.7356091860146134 0.7634404398538897 0.7906445826457765 0.9757845708212198 0.883039567377276 1.0 13.083857413579828 -8.855928034242687 7.218605895112956 0.9892426113174833 0.8569454734374095 0.1616291735222367 0.08736659134350604 0.20042576430617828 13.261621562894355 0.015577742610079196 0.016547014901964828 1.3933876782980594e-09 8.855928034242687 -0.1322971378800738 SWEDS(ph)PER ddPTM_A549_MK2206_60min_R1 4 SWEDSPER 8 0 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IU26;B1AN86 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 SWEDS(1)PER;S(0.02)WEDS(0.98)PER;S(0.001)WEDS(0.999)PER;SWEDS(1)PER 109.02 0.0017048999999999999 27596000.0 8772.1 8804.2 6094.68 6521.4 10312.7 8922.6 7880.0 8762.6 12152.9 11196.8 12324.1 True False 10252.616022745884 9252.296174221327 6958.99726901633 8119.143292756766 8795.715491151082 9866.783609657465 9311.693999627862 10004.72538433704 9400.287554193439 8667.43510348467 9263.685842143477 1.1067534237941712 0.9987705036508971 0.7512125721446231 0.8764484710632326 0.9494833526344938 1.0651034348304755 1.0051824034517642 1.079994027735951 1.0147459352980772 0.9356356909313276 1.0 13.177370612938848 -7.067640473227842 6.601104789857522 1.016528338423242 0.9234834901793776 0.17053249040302987 0.08764342949177854 0.295282013553785 23.835863768166902 0.012539600763661538 0.021935006057406597 8.557748652337893e-08 7.067640473227842 -0.09304484824386439 SWEDS(ph)PER ddPTM_A549_PD325901_60min_R1 4 SWEDSPER 8 0 Q9UDY2-7;A0A1B0GTW1;Q9UDY2;Q9UDY2-3;A0A3B3ITE1;A0A2R8YDH4;Q9UDY2-6;A0A3B3IRI3;Q9UDY2-2;A0A3B3IU51;Q9UDY2-4;A0A3B3ISZ5;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3IU26;B1AN86 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.005)WEDS(0.995)PER;S(0.001)WEDS(0.999)PER;SWEDS(1)PER;SWEDS(1)PER 102.06 0.0022471 30160100.0 12297.46 11679.650000000001 10554.89 11673.05 12456.93 12178.54 10296.93 9489.880000000001 15214.83 14191.8 15985.84 True False 13545.889086288422 12663.935095235242 11271.20830710968 12394.067787079966 11581.998210875527 12079.36200802207 10688.785305846297 9300.596898733165 14575.403606096563 13295.727326012264 14019.683022588992 0.9662050892636319 0.9032968202512622 0.8039560016406309 0.8840476469482386 0.826124113663213 0.861600222241786 0.7624127655827997 0.6633956619238628 1.0396385982915717 0.9483614789713672 1.0 13.775166110716205 -8.801808812842529 24.99990897056028 1.0187183130658286 0.8351516060578034 0.4562066381331852 0.07774845922620514 81.27867101836213 50333.74749676517 0.013278516665817112 0.014136139678581534 1.5783059260365407e-09 8.801808812842529 -0.18356670700802524 SWKEDSEWQAS(ph)LRK ddPTM_A549_MK2206_60min_R1 1 SWKEDSEWQASLRK 14 2 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 SWKEDSEWQAS(1)LRK 74.786 0.00018499 8581700.0 3182.4 2585.1 2216.9 2488.7 4613.1 3453.4 3164.0 2995.9 5581.1 3918.7 4002.7 True False 3719.511317790099 2716.6705481451518 2531.2897552754694 3098.4316117219887 3934.5191009366163 3818.8364958186075 3738.8578445206267 3420.577999558957 4316.989761185318 3033.4629483446497 3008.719121099933 1.2362441185371644 0.9029325898497252 0.8413180670550848 1.0298175027349374 1.3077056855670288 1.2692565647080112 1.2426742723507431 1.1368884438466478 1.4348264452173602 1.0082240402805267 1.0 11.554933714859292 -6.633457079805867 5.88929825191644 1.217844565738078 0.9770650048302237 0.2806383673688876 0.15010733893851289 0.2108441095501554 10.178099682838008 0.02519826323953738 0.05294021380125079 2.3256423116977815e-07 6.633457079805867 -0.24077956090785435 SWKEDSEWQAS(ph)LRK ddPTM_A549_PD325901_60min_R1 1 SWKEDSEWQASLRK 14 2 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 SWKEDSEWQAS(1)LRK 79.805 0.00011472 10048000.0 3982.1 3180.7 3701.4 4062.4 3202.9 4221.8 2945.6 3292.4 6007.6 5206.3 5970.1 True False 4386.359860532921 3448.748751667621 3952.599262326346 4313.325221620202 2977.93935340515 4187.41906053333 3057.6964198941682 3226.7304991621654 5755.12146399176 4877.573329487282 5235.8155475820195 0.8377605782080328 0.6586841572866917 0.7549156815028973 0.8238115308726187 0.5687632282578038 0.799764434495242 0.5839962069149399 0.6162803998418774 1.0991833863684453 0.9315785258592275 1.0 12.35419855817213 -8.765043936369793 24.999997720456584 1.0468366171392158 0.7040621205284511 0.65488285242064 0.09754486239900062 31.814946093069068 220657.20755468967 0.015529309103445538 0.016850423541689672 1.717734599915386e-09 8.765043936369793 -0.34277449661076476 SWPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 SWPSPK 6 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.114)WPS(0.886)PK 87.696 0.038738 79243000.0 9935.8 8078.8 7389.2 7457.9 7685.4 8683.2 7093.6 6455.1 10222.0 9005.7 11971.0 True False 10944.47510165063 8759.628828551062 7890.675546869248 7918.55754488019 7145.604017190657 8612.486898105784 7363.550829766863 6326.347966572015 9792.404887962542 8437.078565077625 10498.642890421326 1.0424656992225223 0.8343582041963831 0.7515900511358934 0.7542458227724713 0.6806216852761141 0.8203428755504752 0.7013812077068708 0.602587213662063 0.9327305433825989 0.8036351605763621 1.0 13.357915229174415 -8.941984504119748 10.761148289292944 0.9703896275361626 0.7698868261465035 0.1798078714190282 0.11713164640154017 0.35142581325051864 63.61250550464342 0.018588988644128484 0.019740957353577705 1.142919114082417e-09 8.941984504119748 -0.20050280138965915 SWS(ph)LATFR ddPTM_A549_MK2206_60min_R1 3 SWSLATFR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.126)WS(0.874)LATFR;S(0.104)WS(0.895)LAT(0.001)FR;S(0.028)WS(0.972)LATFR 100.02 0.0023951000000000003 7642800.0 1586.52 1919.91 1559.65 1354.02 2564.42 1951.24 1850.3799999999999 1361.37 2700.74 2258.9700000000003 2664.2 True False 1854.2857893100631 2017.62521840136 1780.8318222812861 1685.7549607842684 2187.1972150666325 2157.718921671715 2186.5700942933254 1554.3483665207714 2089.0267021955588 1748.6671080771987 2002.6056118206325 0.9259365790073228 1.0075000322040806 0.8892573813684039 0.8417808033862918 1.0921757145572872 1.0774557451230071 1.091862562147444 0.7761629935250525 1.043154323479778 0.8731959491951238 1.0 10.96766261300501 -6.762472063010716 24.99998084324859 1.0160621158425753 0.92072727961367 0.09572889704022547 0.09956361838490893 34.62859026494929 838348.4373448133 0.012795381372023252 0.02521204938952363 1.7279371304544895e-07 6.762472063010716 -0.09533483622890537 SWS(ph)LATFR ddPTM_A549_PD325901_60min_R1 1 SWSLATFR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 S(0.107)WS(0.893)LATFR 127.4 0.0010627 7184400.0 1373.8 999.42 1190.0 972.17 925.95 1091.5 902.2 797.92 1100.7 981.91 1715.7 True False 1513.2671646618924 1083.6446308647953 1270.76055605132 1032.2187329417368 860.9144663540851 1082.611185885672 936.5337147027838 782.0048596438696 1054.4414067873577 919.9120350261908 1504.679776718392 1.0057071199310121 0.7201828904939184 0.8445388684778933 0.6860055866457767 0.5721579299960309 0.7194960699523563 0.6224139708618284 0.5197151392234239 0.700774625340566 0.6113673149993806 1.0 10.555240772513356 -10.50089930538226 0.9334322030593152 0.9912858328546289 0.7046280720658552 0.0 0.16733059033693687 0.40625965961920507 0.6612965899350602 0.07243250118137258 0.02338848926280302 3.155736221012418e-11 10.50089930538226 -0.2866577607887737 SWS(ph)PPPEVSR ddPTM_A549_MK2206_60min_R1 1 SWSPPPEVSR 10 0 Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic 1 S(0.364)WS(0.636)PPPEVSR 156.58 1.4583999999999998e-08 55778000.0 7813.7 7531.4 5430.8 4813.6 11794.0 7970.0 7293.3 6748.1 11359.0 11083.0 11196.0 True False 9132.461533376223 7914.716090789675 6200.969102327584 5992.932216090718 10059.118223417325 8813.38010994217 8618.398203995674 7704.663840189529 8786.204636595654 8579.342602522209 8415.724206119587 1.0851664467254587 0.9404676171581766 0.7368313112992083 0.7121112894518206 1.19527660092553 1.0472515370137039 1.024082775636672 0.9155081192640554 1.0440224063196686 1.019441986499943 1.0 13.03887171113366 -6.757643260408666 24.99999666451391 1.025492359171478 0.8643592433035983 0.3384633847062096 0.11136334193567309 91.41563045232004 602024.3794633071 0.015955912145860267 0.032241627983141355 1.7472568009996032e-07 6.757643260408666 -0.1611331158678797 SWS(ph)PPPEVSR ddPTM_A549_PD325901_60min_R1 2 SWSPPPEVSR 10 0 Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic 1 S(0.123)WS(0.877)PPPEVSR;S(0.045)WS(0.955)PPPEVSR 151.07 2.568e-08 186412000.0 19813.4 15555.4 12906.0 16740.6 13265.6 18023.9 13019.0 11357.2 20069.4 17575.2 22126.0 True False 21824.841782145835 16866.30814968104 13781.878770082638 17774.628841338897 12333.87001983558 17877.119334205003 13514.445169270164 11130.671736448965 19225.95291121848 16465.4988725976 19404.64226827017 1.1247227070932966 0.8691893370928188 0.7102361682090017 0.9159987901659689 0.6356143983135167 0.9212805413804035 0.6964542289639907 0.5736087057193253 0.990791411942498 0.8485340077369754 1.0 14.244114216303329 -8.937501198553482 24.999988249415097 0.9959390632024854 0.8017023732246273 0.12176013733926705 0.15286927070697331 61.3327242869939 24533.299291913245 0.024385340934416175 0.025959918729650117 1.1547787977595828e-09 8.937501198553482 -0.19423668997785803 SWS(ph)SEEESNQATGTSR ddPTM_A549_MK2206_60min_R1 2 SWSSEEESNQATGTSR 16 0 F6UZG9;Q8NFZ0;Q8NFZ0-2 F6UZG9 FBXO18 F-box only protein 18 1 S(0.007)WS(0.909)S(0.08)EEES(0.001)NQAT(0.002)GT(0.001)S(0.001)R;S(0.006)WS(0.93)S(0.055)EEES(0.007)NQAT(0.001)GTSR 53.395 0.015809 3900140.0 2031.73 1846.99 1708.13 1538.25 2429.3 2165.8999999999996 2003.88 1990.25 2734.2 2807.1000000000004 2563.3 True False 2374.636352970612 1940.9939018678633 1950.3685189583152 1915.1213190546666 2071.953188074251 2395.094100391937 2367.9590573571413 2272.3740323849975 2114.9080656201972 2172.9741603843804 1926.7618665189648 1.232449320403466 1.007386504578592 1.012251982380158 0.9939584918787453 1.0753550939938417 1.2430670037699558 1.228983767275443 1.179374613890632 1.0976489115601773 1.1277855339280933 1.0 10.911962560903065 -4.274762597484926 16.285676235147804 1.0796549735349066 1.0769535094174552 0.0 0.0992729101497877 0.0 0.0 0.01404669203060656 0.0 5.3117472596652696e-05 4.274762597484926 -0.0027014641174514242 SWS(ph)SEEESNQATGTSR ddPTM_A549_PD325901_60min_R1 2 SWSSEEESNQATGTSR 16 0 F6UZG9;Q8NFZ0;Q8NFZ0-2 F6UZG9 FBXO18 F-box only protein 18 1 S(0.025)WS(0.878)S(0.093)EEES(0.001)NQAT(0.001)GT(0.001)S(0.001)R;S(0.036)WS(0.868)S(0.095)EEES(0.001)NQATGTSR 60.158 0.0042805 3768300.0 1798.0 2016.5 1800.17 2286.05 2344.2 2519.9 1813.12 2046.15 2590.2 2683.2 3536.6000000000004 True False 1980.5316363823583 2186.4375319073656 1922.340361501601 2427.2541165037564 2179.551479050972 2499.3787698701835 1882.1192737773345 2005.3379330763769 2481.3429016631358 2513.7822940822216 3101.620620354531 0.6385473527564998 0.7049339037659108 0.6197857819509427 0.7825760831530417 0.7027137570428706 0.805829943697141 0.6068180168218634 0.6465452028259847 0.8000149616555958 0.8104738141039581 1.0 11.598806516295445 -9.78109330200015 0.6518900355556816 0.9911451236298607 0.6884455972461021 0.4447606396920003 0.08288649159243477 0.24186272084401675 0.21606274543954757 0.033011452211640153 0.015589628857787774 1.6554142830214145e-10 9.78109330200015 -0.30269952638375863 SWSTATS(ph)PLGGERPFR ddPTM_A549_MK2206_60min_R1 4 SWSTATSPLGGERPFR 16 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q6NVB9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 SWS(0.022)T(0.005)AT(0.161)S(0.812)PLGGERPFR;SWSTAT(0.013)S(0.987)PLGGERPFR;SWS(0.006)T(0.003)AT(0.09)S(0.9)PLGGERPFR;SWST(0.001)AT(0.039)S(0.961)PLGGERPFR 112.62 2.3975999999999997e-07 184137800.0 6810.3 6620.599999999999 5505.3 4638.83 9919.6 7064.9 7048.0 6664.8 9449.4 9047.3 10741.0 True False 7959.712144150922 6957.560261131016 6286.034322575686 5775.343558244995 8460.43998041466 7812.503028698928 8328.530369210303 7609.555810093979 7309.125987591068 7003.508646377261 8073.71326348075 0.9858799643225525 0.8617546888371241 0.7785803282126522 0.7153268105727997 1.047899486186011 0.9676468278897968 1.0315613271630724 0.9425100398987091 0.9052991788365726 0.8674457982122961 1.0 12.97901663532742 -6.770992367285092 24.99990145856866 0.9654991584475422 0.8332114457163029 0.3929054441437845 0.07811398627790479 150.62912773790947 394192.9857760734 0.011052988535922945 0.021081243212547146 1.694367578654448e-07 6.770992367285092 -0.1322877127312393 SWSTATS(ph)PLGGERPFR ddPTM_A549_PD325901_60min_R1 4 SWSTATSPLGGERPFR 16 1 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;E9PDJ9;H0Y8P3;D6RD46;D6RJ93;Q6NVB9 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.009)WS(0.037)T(0.01)AT(0.269)S(0.674)PLGGERPFR;SWSTAT(0.026)S(0.974)PLGGERPFR;SWSTAT(0.058)S(0.941)PLGGERPFR;SWSTAT(0.052)S(0.948)PLGGERPFR 136.36 5.3211000000000005e-11 145697300.0 8612.0 8595.300000000001 7588.0 8165.699999999999 9005.8 9733.6 7656.2 8540.3 12145.0 9850.4 11699.2 True False 9486.28390018068 9319.65609620798 8102.967310350771 8670.076743349753 8373.263676323371 9654.332788764796 7947.560880633394 8369.957016764261 11634.587885375176 9228.444062920218 10260.272567339167 0.9245645120947106 0.9083244168263729 0.7897419154481724 0.8450142709608537 0.8160858906397298 0.9409431109556272 0.7745954923197974 0.8157636126946355 1.1339453030137596 0.8994345912696804 1.0 13.324781436646981 -8.755532899941688 24.99999839645248 1.0632519516023187 0.8506601441789061 0.42158171206818296 0.07670157959356853 59.623094318846704 252362.81397524494 0.011572610357757218 0.012954065810291083 1.755767881113906e-09 8.755532899941688 -0.21259180742341255 SWTS(ph)PK ddPTM_A549_MK2206_60min_R1 2 SWTSPK 6 0 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 SWT(0.003)S(0.997)PK;SWT(0.023)S(0.977)PK 100.39 0.033236 161291000.0 19787.1 15682.599999999999 10820.8 9998.1 26601.0 20922.9 19206.0 18006.2 27317.0 28165.0 29119.0 True False 23126.678731851574 16480.777354199512 12355.352151150157 12447.634948831766 22688.02813813161 23136.947390503035 22695.48159350922 20558.633991674797 21129.743116285194 21802.506938557955 21887.948656484117 1.0565941603212092 0.7529612579439793 0.564481959687437 0.5686981061673982 1.0365534246358201 1.0570633070106783 1.0368939524529577 0.9392672796490903 0.9653596802469513 0.9960964035841317 1.0 14.417849130697181 -6.776924266383688 24.999876500278226 0.992673722907789 0.7246892486906391 0.513773013260721 0.125281667409503 144.47189860998986 233245.36386551525 0.018058456979981527 0.03421302571875766 1.6713820496756216e-07 6.776924266383688 -0.2679844742171499 SWTS(ph)PK ddPTM_A549_PD325901_60min_R1 2 SWTSPK 6 0 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 SWT(0.021)S(0.979)PK;SWT(0.016)S(0.984)PK 96.19 0.035111 232180000.0 31732.0 24773.0 24340.1 23833.0 23378.0 23669.0 21219.7 17628.9 32827.0 28127.0 38365.0 True False 34953.40928013624 26860.70765085107 25991.96555491154 25305.110281329817 21736.0099297217 23476.247511431953 22027.227295365385 17277.2777598955 31447.395348967544 26351.056419816145 33646.34821577265 1.038847040872949 0.7983246050535546 0.7725048016571111 0.7520908396670327 0.6460139385804832 0.6977353786176064 0.6546691829409148 0.513496372595832 0.9346451254470973 0.7831773080046579 1.0 15.038162310926301 -8.95890671450572 18.151374372109284 0.9711696699111925 0.7309503462066257 0.2096925578218678 0.13453899437560976 5.925757237184659 2617.3890335407377 0.021622765399902287 0.022955018782792217 1.099241928811236e-09 8.95890671450572 -0.24021932370456678 SWVIGS(ph)PEILR ddPTM_A549_PD325901_60min_R1 1 SWVIGSPEILR 11 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.019)WVIGS(0.981)PEILR 108.24 0.00012386 9987100.0 7107.5 7562.1 7306.5 7777.1 7459.8 7708.5 6942.5 7552.9 8294.4 7915.8 9071.2 True False 7829.048167735048 8199.384706192255 7802.363027553756 8257.473803924398 6935.849382912906 7645.724531745032 7206.700636581769 7402.251484364571 7945.815212552972 7415.9950370811175 7955.499907074594 0.9841051171118617 1.0306561249407824 0.980750816251703 1.037957878244869 0.8718307414905576 0.9610614821258325 0.9058765282836669 0.9304571140503647 0.9987826416146383 0.9321846676770481 1.0 12.957736874023837 -3.8561819565043343 15.53255629772672 0.9824230244356149 0.9751376737574728 0.0 0.052016997024692146 0.0 0.0 0.006694468029167119 0.0 0.0001392573233831237 3.8561819565043343 -0.007285350678142066 SWVIGS(ph)PEILRK ddPTM_A549_PD325901_60min_R1 1 SWVIGSPEILRK 12 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.001)WVIGS(0.999)PEILRK 50.155 0.012411 1330900.0 697.73 800.0 654.02 759.46 668.64 860.8 787.56 867.88 810.65 938.56 883.17 True False 768.5630359583216 867.4188076002445 698.4057301417515 806.3701193411969 621.6770330827751 853.7899301973302 817.5310267693684 850.569452561311 776.5811996113115 879.2991614243479 774.5456888759 0.9922759199315135 1.119906572405214 0.9016972661165403 1.0410878672780217 0.8026344242971857 1.1023106092507435 1.0554974851849643 1.098152716847142 1.0026280060229444 1.1352450527488918 1.0 9.597206532947796 SY(ph)RS(ph)TARTGLPR ddPTM_A549_MK2206_60min_R1 1 SYRSTARTGLPR 12 2 Q9BUN1-2;Q9BUN1 Q9BUN1-2 MENT Protein MENT 2 S(0.032)Y(0.547)RS(0.484)T(0.5)ART(0.436)GLPR 43.813 0.030902 12032000.0 372.33 595.54 341.37 420.05 676.7 508.42 527.35 428.54 685.79 557.49 580.01 True False 435.170201405476 625.850442242994 389.7813991422197 522.9622688567608 577.1583264190692 562.2206669381177 623.162668871034 489.2868573487082 530.4596599815942 431.5526218063797 435.97750953835504 0.9981482803236024 1.4355108429920853 0.8940401525641744 1.1995166205029972 1.3238259171446867 1.2895634628800878 1.4293459071567347 1.122275453765496 1.2167133587768868 0.9898506513864426 1.0 8.76810990341368 -10.515027153778489 0.7635382547753035 0.9956527466544508 1.2193474038218721 0.21825523643157552 0.15726507122200484 0.849076757522745 0.8635541181236595 0.11109914404127398 0.029211352680038074 3.054730113648497e-11 10.515027153778489 0.22369465716742132 SYALVS(ph)LS(ph)FFRK ddPTM_A549_PD325901_60min_R1 1 SYALVSLSFFRK 12 1 P06213-2;P06213 P06213-2 INSR Insulin receptor;Insulin receptor subunit alpha;Insulin receptor subunit beta 2 SYALVS(1)LS(1)FFRK 59.245 0.017061 8021500.0 3181.8 3285.3 3756.7 3692.8 5761.9 4778.0 4083.0 4286.6 4512.1 4984.5 4889.0 True False 3504.8139936826396 3562.1637607613534 4011.652252872264 3920.8958690427025 5357.204021475895 4739.089552140854 4238.380799303328 4201.100400227355 4322.472128250417 4669.777819339909 4287.683993924472 0.8174142494290304 0.8307897144026565 0.9356221817085081 0.9144554203617855 1.2494400308107836 1.10527957723937 0.988501206084449 0.9798064424011182 1.0081135023885246 1.089114269138503 1.0 12.065982866484411 -6.0659594820468135 1.923594425669241 1.0220762352832813 0.8224523897864469 0.5074255828573865 0.08322556421587576 0.24195910583674513 1.6971791232822773 0.011978260439166437 0.048594713966632036 8.590936677995763e-07 6.0659594820468135 -0.19962384549683443 SYDKPAVDDDDEGMET(ph)LEEDTEESSR ddPTM_A549_MK2206_60min_R1 3 SYDKPAVDDDDEGMETLEEDTEESSR 26 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 SYDKPAVDDDDEGMET(0.998)LEEDT(0.002)EESSR;SYDKPAVDDDDEGMET(0.998)LEEDT(0.002)EESSR;SYDKPAVDDDDEGMET(1)LEEDTEESSR 120.98 1.1789000000000001e-17 15169200.0 4097.07 4717.299999999999 3229.41 3302.5299999999997 5708.5 4305.5 3638.84 4174.07 5926.1 6319.400000000001 5378.280000000001 True False 4788.555252255615 4957.390420782609 3687.388898274234 4111.649998256205 4868.787212004226 4761.105152240404 4299.970126092109 4765.757205053258 4583.847812037106 4891.843150986091 4042.704643023296 1.1844929756418077 1.226255900078635 0.9121093980085218 1.0170542647363299 1.2043390853216407 1.1777029421273426 1.06363697222175 1.1788536699750676 1.1338567164305928 1.2100421828807597 1.0 11.981105089901464 -10.679455234001964 0.9254577250518912 0.99940384065564 1.1198916794628355 0.0 0.1080184170857377 0.7896912996148526 1.1948858980410735 0.06337685067076662 0.016443878061363163 2.091918525763101e-11 10.679455234001964 0.12048783880719549 SYDKPAVDDDDEGMET(ph)LEEDTEESSR ddPTM_A549_PD325901_60min_R1 3 SYDKPAVDDDDEGMETLEEDTEESSR 26 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 SYDKPAVDDDDEGMET(0.999)LEEDT(0.001)EESSR;SYDKPAVDDDDEGMET(0.998)LEEDT(0.002)EESSR;SYDKPAVDDDDEGMET(1)LEEDTEESSR 178.4 5.678999999999999e-49 69589000.0 5350.599999999999 6197.5 5919.0 5472.4 7714.800000000001 6081.2 7416.0 7516.3 7060.6 7460.3 7134.4 True False 5893.788973096468 6719.785075128143 6320.698933838454 5810.417719277858 7172.939062615154 6031.676723415437 7698.219938190911 7366.3815000767145 6763.867535897892 6989.255384817236 6256.914028687823 0.9419641929030136 1.0739775301878955 1.0101943074266608 0.9286395326253823 1.1464020489537454 0.9640018539107813 1.230354117524187 1.1773186376386195 1.0810229299756553 1.1170451364317366 1.0 12.611235565902817 -6.754456498350642 24.9999196866571 1.0650830257342074 0.9963213439448001 0.227844388527351 0.08404002726187995 284.6998842255034 1019264.425867845 0.012597889368270526 0.025791240888863844 1.7601249600874628e-07 6.754456498350642 -0.06876168178940734 SYDS(ph)LHRPK ddPTM_A549_MK2206_60min_R1 4 SYDSLHRPK 9 1 Q8N8S7 Q8N8S7 ENAH Protein enabled homolog 1 S(0.052)Y(0.001)DS(0.946)LHRPK;SYDS(1)LHRPK;SYDS(1)LHRPK;S(0.285)Y(0.011)DS(0.704)LHRPK 97.214 0.0003665 47739300.0 19672.9 17195.300000000003 14031.3 13079.5 17301.4 13501.0 12788.3 13876.1 19448.6 28215.8 29805.9 True False 22993.204563773525 18070.467322935416 16021.149327076862 16283.978087161066 14756.386979025992 14929.666858761508 15111.76857556358 15843.079668774015 15043.523153032325 21841.831183275826 22404.272429008553 1.0262865994256718 0.806563452582293 0.7150934884336183 0.7268246776930338 0.6586416508629734 0.6663758846027469 0.6745038752518112 0.7071454660701567 0.6714577855942471 0.9748958040251068 1.0 14.451486255778551 -10.791981268393233 1.0012336508185775 1.0025015315923005 0.7298534499542159 0.47227381729243567 0.1004775130105157 0.38018881981160746 0.6665804890652035 0.074413442913063 0.017987851539711282 1.61442818741833e-11 10.791981268393233 -0.2726480816380846 SYDS(ph)LHRPK ddPTM_A549_PD325901_60min_R1 2 SYDSLHRPK 9 1 Q8N8S7 Q8N8S7 ENAH Protein enabled homolog 1 S(0.045)YDS(0.955)LHRPK;S(0.006)YDS(0.994)LHRPK 62.693999999999996 0.0019697 48706000.0 13582.3 12150.8 11550.0 13406.6 14348.2 14881.8 12873.3 13270.0 17005.0 15460.0 16767.6 True False 14961.165097239204 13174.790559236313 12333.852455792214 14234.695233402266 13340.431930602832 14760.60755484507 13363.200476040063 13005.319439886393 16290.33898648044 14483.852961579896 14705.291498573948 1.0174001038122957 0.8959217544591989 0.8387356657967844 0.9679981681956241 0.907185820280851 1.003761642962092 0.9087341435792664 0.8843972553109599 1.1077875598766744 0.9849415744655231 1.0 13.844047762168094 -8.757288291104649 24.999999748122328 1.050899682201752 0.9264913587165574 0.3701660211101603 0.05817756299345859 66.76519709313627 402093.97160374536 0.010267474961165082 0.011438673509410328 1.74868549994476e-09 8.757288291104649 -0.1244083234851946 SYELPDGQVIT(ph)IGNER ddPTM_A549_PD325901_60min_R1 1 SYELPDGQVITIGNER 16 0 P60709;P63261;A0A2R8Y793;P63267-2;Q6S8J3;A5A3E0;Q562R1;A0A2R8YEA7;Q9BYX7;P68133;P68032;P63267;P62736 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;ACTBL2;POTEKP;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 1 SYELPDGQVIT(1)IGNER 94.544 7.059199999999999e-06 1474900.0 969.82 995.33 789.03 1045.1 1307.2 903.62 745.8 995.61 904.84 628.48 1066.2 True False 1068.2754124562503 1079.2099522109386 842.5783206228344 1109.653453405689 1215.386781595184 896.2612183142567 774.1818271174193 975.7517775090649 866.8127214658605 588.7976655429325 935.0641591986654 1.1424621529411894 1.1541560454373567 0.9010914516763323 1.1867137056741046 1.299789719923337 0.9585023760105807 0.8279451409846361 1.0435131834646172 0.9270088185271743 0.6296869147968652 1.0 9.868921548338747 -7.396212065252063 24.649780002527216 0.9593176753773403 1.1276524881972128 0.3751405872024869 0.1417664494858997 9.684287396974666 1851.4068846470086 0.015063816408966682 0.024081170954302025 4.015946649765556e-08 7.396212065252063 0.1683348128198725 SYELPDGQVITIGNER ddPTM_A549_MK2206_60min_R1 5 SYELPDGQVITIGNER 16 0 P60709;P63261;A0A2R8Y793;P63267-2;Q6S8J3;A5A3E0;Q562R1;A0A2R8YEA7;Q9BYX7;P68133;P68032;P63267;P62736 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;ACTBL2;POTEKP;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;;; 237.59 9.090499999999998e-65 147317610.0 10146.3 11254.900000000001 12176.6 10230.2 15842.599999999999 12685.900000000001 11841.369999999999 10759.17 17687.0 16524.78 16254.420000000002 False True 11858.747386781566 11827.72633643529 13903.424978161971 12736.599459251123 13512.17452656531 14028.313517781102 13992.793651824024 12284.315296076216 13680.922740335174 12791.820721041853 12217.998914829783 0.9705965329877244 0.968057569728477 1.137946162467446 1.042445620435592 1.1059236967327524 1.1481678477442017 1.1452606723380911 1.005427761265058 1.1197351412210181 1.0469652854131117 1.0 13.576720396943909 -5.7358093156594325 24.566907640892488 1.0726328880225517 0.9693268534003415 0.4037793663786339 0.05216968879521793 173.26356724394566 166073.18636214922 0.008270231715899995 0.032005531610237975 1.837344883631951e-06 5.7358093156594325 -0.10330603462221022 SYELPDGQVITIGNER ddPTM_A549_PD325901_60min_R1 2 SYELPDGQVITIGNER 16 0 P60709;P63261;A0A2R8Y793;P63267-2;Q6S8J3;A5A3E0;Q562R1;A0A2R8YEA7;Q9BYX7;P68133;P68032;P63267;P62736 P60709;P68133 ACTB;ACTG1;ACTG2;POTEE;POTEF;ACTBL2;POTEKP;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member F;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 320.48 1.0096999999999997e-163 401410000.0 9510.5 9440.4 9838.0 10640.4 12209.699999999999 11175.2 10717.3 11406.4 11020.5 12130.099999999999 11583.8 False True 10475.998958739941 10235.975639086684 10505.665840699901 11297.633341898278 11352.132793178336 11084.192876325757 11125.152716231592 11178.890403852305 10557.34670982109 11364.203415864185 10159.066035758302 1.031197053141114 1.0075705387737093 1.0341172902825537 1.1120740137068112 1.1174386260725768 1.091064162523519 1.0950960134595855 1.1003856421943103 1.0392044576401909 1.1186267887091186 1.0 13.310480154935599 -9.298695561794888 1.4659990578277733 1.0111849431569258 1.0735333756131205 0.0 0.04754920381253091 0.30754187963455465 1.3672260823284355 0.008876661872549565 0.007681802666038947 5.026948525549102e-10 9.298695561794888 0.0623484324561947 SYES(ph)SEDCSEAAGSPAR ddPTM_A549_MK2206_60min_R1 2 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYES(0.687)S(0.313)EDCSEAAGSPAR;S(0.005)YES(0.861)S(0.134)EDCSEAAGSPAR 155.22 4.4937e-22 7351900.0 1024.02 887.88 962.51 1151.0500000000002 1103.3600000000001 1170.05 940.6199999999999 910.3299999999999 1187.1000000000001 1607.69 1475.6100000000001 True False 1196.8495411146987 933.069299557896 1099.0083911544016 1433.0573016725982 941.057205612154 1293.8639143836685 1111.5184784175076 1039.372065268702 918.223745409164 1244.5117124108024 1109.1753122358089 1.0790445188526252 0.8412279729496241 0.990833801501664 1.292002522832867 0.8484296352712968 1.166509838535421 1.0021125300535003 0.9370674354206445 0.8278436558042965 1.1220153375954525 1.0 10.115271695341313 -8.235444704730929 4.063789513440307 0.9173770088537525 1.0319187803760008 0.0 0.14044272378024777 0.33161905949890297 12.636869931402225 0.020960364803225415 0.026734621299821876 5.815074663251068e-09 8.235444704730929 0.11454177152224831 SYES(ph)SEDCSEAAGSPAR ddPTM_A549_PD325901_60min_R1 2 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYES(0.921)S(0.075)EDCS(0.004)EAAGSPAR;SYES(0.872)S(0.128)EDCSEAAGSPAR 155.22 4.4937e-22 10531200.0 1649.0 1906.3000000000002 1543.52 1670.8899999999999 2174.38 1790.83 1535.9299999999998 1862.76 1507.28 1863.98 1873.92 True False 1816.4052660703614 2066.950591160432 1648.2725491397748 1774.0970804334802 2021.6590500037769 1776.2460742277951 1594.3806566431458 1825.60579049305 1443.9342633073925 1746.2879846911842 1643.4397197576086 1.1052460544998046 1.257697843316874 1.0029406794323306 1.079502374869668 1.2301388518843588 1.0808099943512222 0.9701485472666448 1.1108443884770591 0.8786049442205028 1.0625810996881253 1.0 10.682502824985592 -8.00120029834618 1.2201452056761546 0.9477402598104583 1.1324067169799648 0.24080772735372602 0.09102135322160133 0.29141814223921353 0.8661041965555403 0.015830393187465014 0.023181047124628148 9.972400266698582e-09 8.00120029834618 0.18466645716950647 SYESSEDCSEAAGS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCSEAAGS(1)PAR;SYESSEDCSEAAGS(1)PAR 292.2 1.1299999999999997e-132 51706000.0 5246.299999999999 5713.8 5676.9 4785.5 7113.6 6607.799999999999 5283.6 6154.3 8060.2 8647.8 8402.2 True False 6131.747180279725 6004.608014386977 6481.969782905551 5957.947714829257 6067.198863328941 7307.0330100973515 6243.5617279738235 7026.690871753298 6234.577569494522 6694.25597384206 6315.7018510769885 0.9708734397007841 0.9507427924836315 1.0263261211103893 0.943354809222553 0.960653147724877 1.156962944482776 0.9885776553731929 1.112574823422842 0.9871551438786439 1.059938567666952 1.0 12.624727351343866 -5.755528617635882 24.97375567447823 1.0082710748440509 0.960808103360614 0.08614773260491038 0.06293603924380738 270.53368730337775 1143004.0204427997 0.00808837192713684 0.02974709569082918 1.755785193726369e-06 5.755528617635882 -0.04746297148343692 SYESSEDCSEAAGS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCSEAAGS(1)PAR;SYESSEDCSEAAGS(1)PAR 342.51 3.851899999999998e-219 73413000.0 14468.5 16425.2 16820.6 16228.900000000001 16516.6 15673.400000000001 15671.400000000001 16034.0 12207.3 14704.5 16429.4 True False 15937.331468853248 17809.40924824442 17962.147066484733 17231.32229449392 15356.53099517673 15545.761026899212 16267.783702719133 15714.189291570328 11694.26963302926 13776.05536051433 14408.687954547499 1.1060917912253974 1.2360188036845943 1.2466192010783144 1.1958980823826901 1.0657827446620554 1.0789157955213295 1.1290260261056517 1.0906051502497007 0.8116123876038591 0.9560936709831721 1.0 13.814651350201084 -8.60728897304742 5.473449785788676 0.9114357151148861 1.150988206057206 0.6710733675928299 0.06972874119479539 0.10224525698225174 5.105557736147293 0.015165908743351506 0.017220411053623694 2.470080043809447e-09 8.60728897304742 0.23955249094232 SYESSEDCSEAAGS(ph)PARK ddPTM_A549_MK2206_60min_R1 2 SYESSEDCSEAAGSPARK 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCSEAAGS(1)PARK;SYESSEDCSEAAGS(1)PARK 111.45 7.8606e-10 37224000.0 7593.0 10657.8 10205.1 10165.3 14788.900000000001 12051.3 12022.3 8908.2 16314.300000000001 12738.4 14875.6 True False 8874.51276897317 11200.236496855587 11652.336632938648 12655.798956337652 12613.472400737372 13326.560566994485 14206.596290828167 10170.964630218336 12619.13709858372 9860.786592796981 11181.577974325868 0.7936726631384253 1.0016686842029416 1.042101272261723 1.1318437330935542 1.1280583500557158 1.1918318324653043 1.270535904990161 0.9096180032524915 1.1285649599330834 0.8818779080589906 1.0 13.448836179098317 -5.191698958135586 1.6592894863985743 1.0835812497464372 0.6553967755421425 0.35911146310743447 0.10951208054674626 0.8613600844277663 1.9700266919478324 0.013713999288765275 0.6189020903476805 6.431333664986296e-06 5.191698958135586 -0.42818447420429473 SYESSEDCSEAAGS(ph)PARK ddPTM_A549_PD325901_60min_R1 2 SYESSEDCSEAAGSPARK 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCSEAAGS(1)PARK;SYESSEDCS(0.004)EAAGS(0.996)PARK 123.17 7.7359e-11 35946000.0 11020.099999999999 10138.3 12237.2 10517.0 11054.5 10513.1 10771.0 12351.8 10656.599999999999 10249.599999999999 11457.3 True False 12138.852439431153 10992.690121366939 13067.689980261519 11166.611204160015 10278.07005595468 10427.484799207192 11180.89629911735 12105.433659200358 10208.740161324746 9602.438506792323 10048.124733808725 1.2080714323328212 1.0940041463040415 1.300510326697371 1.1113129563955293 1.0228844016408616 1.0377543149043564 1.1127346241530234 1.2047455599818986 1.015984617206791 0.955644835347554 1.0 13.294638658100459 -5.501732056265019 0.16474239629825033 0.9591083067500906 1.3884920950317836 0.4222593332078659 0.07627818322451614 12.812117409357016 0.3783192475988866 0.15264076532909865 1.1882637993278775 3.149690958339571e-06 5.501732056265019 0.429383788281693 SYIVMSPES(ph)PVK ddPTM_A549_MK2206_60min_R1 2 SYIVMSPESPVK 12 0 H0YCZ0;H7BY22;H0YEM9;Q8NCP5-3;Q8NCP5-4;Q8NCP5-2;Q8NCP5 H0YCZ0 ZBTB44 Zinc finger and BTB domain-containing protein 44 1 SYIVMS(0.147)PES(0.853)PVK;SYIVMS(0.078)PES(0.922)PVK 113.65 3.0685e-05 2852500.0 2873.7 3357.6000000000004 2817.7 3466.9 3672.2999999999997 3082.9 3130.8 3043.7 4690.4 4330.6 4842.9 True False 3358.7103047804817 3528.4874985308716 3217.2922294373634 4316.2906556350545 3132.109534666394 3409.1304317366044 3699.6258342683886 3475.153795940318 3628.0318890296903 3352.314452267679 3640.2742727596046 0.9226530896075377 0.9692916616021929 0.8838048972058392 1.1857047937113205 0.8604048211708007 0.9365037291962686 1.0163041455290651 0.9546406494546598 0.9966369611703368 0.9208961196559428 1.0 11.82983143757047 -2.000000000000216 0.38702599864810444 0.9940439347853449 1.5798389413824894e-07 0.0 0.08301018002854395 134.57336599514306 1.5928140087749343 0.01697722331740546 102.27549634507838 0.00999999999999503 2.000000000000216 -0.9940437768014507 SYIVMSPES(ph)PVK ddPTM_A549_PD325901_60min_R1 1 SYIVMSPESPVK 12 0 H0YCZ0;H7BY22;H0YEM9;Q8NCP5-3;Q8NCP5-4;Q8NCP5-2;Q8NCP5 H0YCZ0 ZBTB44 Zinc finger and BTB domain-containing protein 44 1 SYIVMS(0.376)PES(0.624)PVK 65.295 0.00086663 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SYKYS(ph)PETPPR ddPTM_A549_PD325901_60min_R1 2 SYKYSPETPPR 11 1 Q99666;O14715;J3KQ37;F8W705;Q99666-2 Q99666 RGPD5;RGPD8 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 S(0.014)YKYS(0.746)PET(0.24)PPR;S(0.012)YKYS(0.645)PET(0.343)PPR 75.764 0.00035984 23449000.0 7546.4 7284.700000000001 7232.5 7501.6 7788.6 7593.799999999999 6771.6 7626.9 7455.3 8212.2 9147.900000000001 True False 8312.504972633938 7898.607234656874 7723.340942555605 7964.956794630289 7241.55560521133 7531.958610516366 7029.296943561706 7474.775496312692 7141.979667504123 7693.680290497179 8022.766293315955 1.0361145605798556 0.9845241586106624 0.9626780414867859 0.9927943184966226 0.902625770271349 0.9388231359539293 0.8761687286613418 0.9316955303235227 0.890214099026461 0.9589809810248431 1.0 12.969884056195706 -5.314618075765782 0.8913215620145453 0.938468145914006 1.0795204564379108 0.4297671044421645 0.035895211980863394 2.05431368796366 1.264389640702338 0.007203604587907933 0.2761803185128815 4.845983423582439e-06 5.314618075765782 0.14105231052390488 SYKYS(ph)PK ddPTM_A549_MK2206_60min_R1 3 SYKYSPK 7 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 SYKYS(1)PK;S(0.023)Y(0.006)KY(0.039)S(0.931)PK;S(0.001)YKY(0.003)S(0.996)PK 67.563 0.019459999999999998 83505500.0 7152.0 7993.0 7404.9 6774.299999999999 11955.300000000001 8208.2 7612.099999999999 7565.1 13226.9 11092.800000000001 11872.6 True False 8359.082750388005 8399.809559136665 8455.026166646809 8434.003804109883 10196.69120709015 9076.786275837809 8995.120037381625 8637.47609214709 10231.02826901902 8586.928775715809 8924.305752909551 0.9366647649496691 0.9412283478071236 0.9474155638258197 0.9450599338060759 1.142575287020592 1.017085981492571 1.007934990847774 0.9678597227948014 1.1464228761641704 0.9621957173437554 1.0 13.123524226824365 -6.696873499654764 13.128633353421272 1.0583576525041254 0.9427509546948318 0.30808678745051155 0.06030421808551875 0.7837102993294228 157.91298817114134 0.009370486524615754 0.019506677866541214 2.0096781019984303e-07 6.696873499654764 -0.11560669780929356 SYKYS(ph)PK ddPTM_A549_PD325901_60min_R1 3 SYKYSPK 7 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 S(0.001)YKY(0.002)S(0.998)PK;S(0.046)Y(0.01)KY(0.033)S(0.911)PK;SYKY(0.002)S(0.998)PK 64.04 0.0076351 119355400.0 12376.600000000002 11545.9 12143.999999999998 11655.1 14026.8 14418.3 12825.8 12875.5 14110.9 14114.5 15062.1 True False 13633.063320828633 12518.913513339574 12968.164867804391 12375.009056347373 13041.605957833024 14300.882145172129 13313.892837547064 12618.688051865654 13517.86794497658 13223.308061204369 13209.557186518674 1.0320605852512739 0.9477163644907073 0.9817259340865232 0.9368223992381047 0.9872856276471511 1.082616316598957 1.0078984972437133 0.9552695729077092 1.0233399768141025 1.0010409792312893 1.0 13.689294484626153 -7.007971614961398 24.989097784764542 1.0118108549130465 0.9717828833756884 0.19179601160668758 0.03586305020351818 440.8280275161358 1381897.2567415428 0.005000202441021089 0.009161884242975952 9.818121111481072e-08 7.007971614961398 -0.04002797153735804 SYKYS(ph)PKT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 SYKYSPKTPPR 11 2 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 2 S(0.384)Y(0.135)KY(0.109)S(0.502)PKT(0.869)PPR;S(0.287)Y(0.076)KY(0.04)S(0.632)PKT(0.965)PPR 50.305 0.013209 24727000.0 5233.0 5411.1 6287.6 5256.799999999999 6951.9 6043.4 5507.2 5996.8 8017.700000000001 8218.7 7502.2 True False 6116.202465433507 5686.501877323213 7179.276225932624 6544.716235986717 5929.284719126241 6682.908576715748 6507.786953648545 6846.8647644297735 6201.703751635967 6362.089961864954 5639.19668981336 1.0845875400093439 1.0083886393952717 1.273102645790182 1.1605759820027357 1.051441374590976 1.1850816604407057 1.154027304173342 1.2141560475799584 1.0997495020591708 1.1281908242990404 1.0 12.461273948320867 -9.871679563841097 0.9139665338383034 1.0123913283231831 1.1394610994268108 0.046833149090990234 0.07925719525097688 0.42128947289536367 0.7228209137268503 0.02609280309940832 0.014325130709310392 1.3437560610412442e-10 9.871679563841097 0.12706977110362772 SYKYS(ph)PKT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 SYKYSPKTPPR 11 2 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 2 S(0.066)Y(0.013)KY(0.016)S(0.921)PKT(0.984)PPR;S(0.113)Y(0.021)KY(0.018)S(0.856)PKT(0.991)PPR 66.24600000000001 0.0025934 46736000.0 7188.3 7104.700000000001 7739.700000000001 7113.1 8966.4 8063.299999999999 6635.4 7940.9 8703.0 8432.2 8453.6 True False 7918.0509242532235 7703.438002946824 8264.962584596971 7552.460031977805 8336.630996400745 7997.635158178595 6887.913778030198 7782.5125199844615 8337.243175497746 7899.789452951747 7413.860791785624 1.068006420221193 1.0390588951281692 1.1147987285861027 1.0186946105524055 1.1244655423848162 1.078740939813677 0.9290589574681302 1.049724662837923 1.1245481146254064 1.0655432675111083 1.0 12.856009310948636 SYKYSPET(ph)PPR ddPTM_A549_MK2206_60min_R1 2 SYKYSPETPPR 11 1 Q99666;O14715;J3KQ37;F8W705;Q99666-2 Q99666 RGPD5;RGPD8 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 S(0.013)YKY(0.001)S(0.146)PET(0.84)PPR;S(0.005)YKYS(0.069)PET(0.926)PPR 64.798 0.0023821 13015800.0 5547.799999999999 6772.0 5740.1 5212.700000000001 7041.9 5735.8 5964.1 5447.4 8333.6 7913.299999999999 7717.6 True False 6484.133009312442 7116.665874449332 6554.132493236829 6489.811734006995 6006.045838348519 6342.758548884102 7047.699769439155 6219.585631962837 6446.052906024606 6125.6800339744605 5801.106925075789 1.1177406472692673 1.2267772282711984 1.1298072209126195 1.1187195509109165 1.0353275531583228 1.0933703913415174 1.2148887894092866 1.0721377337621787 1.1111763650073372 1.0559502027958967 1.0 12.502112495755414 -14.999999999517028 0.1621406628845189 0.5045510617555145 1.160425959835746 0.31720482700303565 0.054225097731473465 37.179889457784085 0.3870339772540755 5.834376748905514 0.07981037945019785 1.000000001112084e-15 14.999999999517028 0.6558748980802316 SYLEGSS(ph)DNQLKDSESTPVDDR ddPTM_A549_MK2206_60min_R1 4 SYLEGSSDNQLKDSESTPVDDR 22 1 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 SYLEGS(0.331)S(0.669)DNQLKDSESTPVDDR;SYLEGS(0.097)S(0.903)DNQLKDSESTPVDDR;SYLEGS(0.166)S(0.834)DNQLKDSESTPVDDR;SYLEGS(0.166)S(0.834)DNQLKDSESTPVDDR 233.43 9.3532e-89 61869000.0 10375.4 11857.5 10581.3 9458.400000000001 14036.2 10234.1 10620.3 11911.2 15717.400000000001 13441.5 15235.900000000001 True False 12126.513865824334 12460.996102522588 12081.88744981565 11775.708424603712 11971.493573641701 11317.065669154232 12549.871038610127 13599.64907652013 12157.433995530291 10405.055814472822 11452.405540551756 1.0588617232323492 1.0880680096770516 1.054965038308761 1.0282301288499762 1.0453256768852544 0.9881824066639712 1.0958283824452741 1.1874927960213435 1.0615616040212779 0.908547621513194 1.0 13.48336304310482 -10.30458703759382 1.1058989115112725 1.0057224330965189 1.0664046854792035 0.31175520537707824 0.0556054282232116 0.5614948891525826 1.3568718158210773 0.02027268888318296 0.009040057049958097 4.959215290753338e-11 10.30458703759382 0.060682252382684654 SYLEGSS(ph)DNQLKDSESTPVDDR ddPTM_A549_PD325901_60min_R1 2 SYLEGSSDNQLKDSESTPVDDR 22 1 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 SYLEGS(0.021)S(0.979)DNQLKDSESTPVDDR;SYLEGS(0.027)S(0.973)DNQLKDSESTPVDDR 309.96 8.759199999999996e-176 104254000.0 18905.9 19704.7 19877.7 18614.3 22027.4 20245.7 20592.3 19370.0 20989.0 22351.6 24261.0 True False 20825.21305021203 21365.284222650676 21226.720256320426 19764.06303485745 20480.27141440465 20080.825731640445 21375.951245038934 18983.650154528965 20106.90532121364 20940.316161452094 21277.05080315027 0.9787640798004139 1.0041468820240511 0.997634514891397 0.9288910957495666 0.9625521696537169 0.943778624087662 1.00464822135378 0.892212474847231 0.9450043385823294 0.9841738103267433 1.0 14.377010573314637 SYLLGNS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 SYLLGNSSPR 10 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 SYLLGNS(0.5)S(0.5)PR 80.245 0.0012028 15709000.0 3526.4 2974.7 2490.0 2952.5 3216.7 3387.1 2730.0 2610.0 2984.5 3131.1 3400.7 True False 3884.3975320015256 3225.388408710557 2658.9863735863746 3134.8692193859865 2990.770089012568 3359.5165805894244 2833.89164391332 2557.9415024946093 2859.07184387832 2933.4018116431325 2982.4354588134515 1.3024246746137185 1.0814612598502846 0.8915486723203863 1.051110497671316 1.0027945718572002 1.1264339587506087 0.9501937872750383 0.8576686864876113 0.9586366187504319 0.9835591925299109 1.0 11.542275202378981 -7.7797377890913735 24.905929207747604 0.9667435194741577 1.0633743658699988 0.27397733119469114 0.09927866717812496 307.21926601098306 418154.2432319747 0.015584183913761233 0.02155437789775807 1.660589207035652e-08 7.7797377890913735 0.09663084639584107 SYLLGNSS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SYLLGNSSPR 10 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 SYLLGNS(0.335)S(0.665)PR 87.667 0.00071991 14018000.0 2634.5 2425.8 2544.3 2202.8 3083.1 1809.9 2124.6 2073.5 2978.7 3317.4 4183.2 True False 3079.1391926590045 2549.2628585704647 2905.119998352374 2742.486098887449 2629.5800741578732 2001.4224166856138 2510.612318732152 2367.4249748274306 2304.029206006467 2567.997035965637 3144.395989553364 0.9792466352484985 0.8107321301260682 0.9239039891934929 0.8721821640781945 0.8362751011304349 0.6365045698235672 0.7984402495974319 0.7529029367461139 0.7327414274986834 0.8166900875390063 1.0 11.618567199520225 -3.20178995430627 1.6592462027052963 0.8414454118059681 131.66738627764934 0.1478921649244357 0.09484264072265643 2681.021285126169 9.356042004603697 0.01749850569378167 1333797.0082532894 0.0006283621915028414 3.20178995430627 130.82594086584336 SYLLGNSS(ph)PR ddPTM_A549_PD325901_60min_R1 3 SYLLGNSSPR 10 0 P02545;P02545-3;P02545-5;P02545-4;A0A0C4DGC5 P02545 LMNA Prelamin-A/C;Lamin-A/C 1 SYLLGNS(0.048)S(0.952)PR;S(0.002)YLLGNS(0.083)S(0.914)PR;SYLLGNS(0.301)S(0.699)PR 81.09 0.0011427999999999998 32929900.0 10299.5 9890.0 9697.1 10407.300000000001 10671.4 10574.1 9817.4 9906.2 10097.2 10480.5 11923.6 True False 11345.097657908835 10723.465008958021 10355.203519399365 11050.135284306789 9921.877678331428 10487.988035431687 10191.006529287417 9708.61306973644 9672.849797958845 9818.759441386681 10457.072789927977 1.08492097987844 1.0254748364462594 0.99025833781833 1.0567140065191127 0.9488197966727326 1.0029563957452305 0.9745563346468402 0.9284255034628394 0.9250054955413068 0.9389586970116431 1.0 13.352191439310799 -5.2731587753590246 0.5323367747143614 0.9625163982966252 1.1478928477932204 0.5701508844158054 0.03279621534068694 2.5492103506012422 0.48055439056088617 0.007047750764630108 0.2917360697428583 5.33139947208044e-06 5.2731587753590246 0.18537644949659526 SYLT(ph)PVRDEESESQR ddPTM_A549_MK2206_60min_R1 1 SYLTPVRDEESESQR 15 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.001)YLT(0.999)PVRDEESESQR 104.03 2.3094e-06 9404600.0 1116.0 1395.0 1433.8 1391.6 1906.6 1614.5 1478.7 1351.8 1837.5 1989.2 2517.6 True False 1304.353516419604 1465.999541473246 1637.1343998890193 1732.5420624712967 1626.1416656577476 1785.3453183816353 1747.3606493971715 1543.4217897138758 1421.3091838845414 1539.8383384406 1892.4104377747992 0.6892550846175499 0.7746731428923258 0.8651053530512399 0.9155212991260582 0.859296499954764 0.9434239437407368 0.9233518345268771 0.8155851177447089 0.751057569496285 0.8136915267975519 1.0 10.886009307971806 -11.012618228815436 1.305526330441856 0.9997342189483881 0.8342630176484891 0.0 0.09129630247949139 0.39876013346195255 1.2135216294960298 0.05789286231472545 0.013216091096942679 9.713634794465069e-12 11.012618228815436 -0.165471201299899 SYLT(ph)PVRDEESESQR ddPTM_A549_PD325901_60min_R1 2 SYLTPVRDEESESQR 15 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.005)YLT(0.995)PVRDEESESQR;S(0.051)YLT(0.949)PVRDEESESQR 107.33 1.6786000000000001e-06 20129600.0 4656.6 4323.8 4094.0 3887.2 5328.4 4583.2 4468.5 4813.1 5332.4 4850.3 5391.4 True False 5129.334603992262 4688.181800377422 4371.843459221935 4127.3035155282705 4954.1515659820825 4545.875938755119 4638.551212757022 4717.098944696094 5108.297771920505 4544.051230242622 4728.29197890047 1.0848176523111104 0.991516983574188 0.9246136826428758 0.8728952302323861 1.0477676903392363 0.9614203097102793 0.981020468586985 0.997632753168729 1.0803685125021407 0.9610343968858092 1.0 12.207103411443502 -8.553690298918028 9.608347841218539 1.0380360684426135 0.9774504104176827 0.013195589531665997 0.06017523938561964 0.43846858417576723 130.5530745994054 0.009993911593117485 0.011353472658323037 2.7945359510332326e-09 8.553690298918028 -0.06058565802493088 SYMNPGDQS(ph)PADSNK ddPTM_A549_MK2206_60min_R1 3 SYMNPGDQSPADSNK 15 0 Q92754-2;Q92754 Q92754-2 TFAP2C Transcription factor AP-2 gamma 1 SYMNPGDQS(1)PADSNK;SYMNPGDQS(1)PADSNK;SYMNPGDQS(1)PADSNK 161.84 2.3639e-50 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SYMNPGDQS(ph)PADSNK ddPTM_A549_PD325901_60min_R1 3 SYMNPGDQSPADSNK 15 0 Q92754-2;Q92754 Q92754-2 TFAP2C Transcription factor AP-2 gamma 1 SYMNPGDQS(0.999)PADS(0.001)NK;SYMNPGDQS(1)PADSNK;SYMNPGDQS(1)PADSNK 138.77 1.6879e-14 7651700.0 1824.6399999999999 1491.0700000000002 1788.8 1857.73 2155.27 1953.33 1988.99 1577.5 1859.74 2380.0699999999997 2346.2 True False 2009.8761095710272 1616.7277018106201 1910.1987249282347 1972.477762889055 2003.8912704778545 1937.4227281044964 2064.6821028670897 1546.0355249751901 1781.5815952200587 2229.791974014712 2057.6322737871956 0.9767907196905158 0.7857223676001814 0.9283479605480718 0.9586152919630248 0.9738821148978055 0.9415787032434876 1.0034261851204922 0.7513662886564366 0.8658406158943799 1.0836688374403491 1.0 11.006769461167053 -10.937172645525123 1.2695578021136489 0.9986649014180905 0.9050258921416473 0.2505715777020966 0.08073767814779151 0.6413917748097505 1.8785947033768982 0.05010516346757885 0.012486397897322948 1.1556527430605006e-11 10.937172645525123 -0.0936390092764432 SYQNS(ph)PSS(ph)DDGIRPLPEYSTEK ddPTM_A549_PD325901_60min_R1 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 2 S(0.005)Y(0.001)QNS(0.909)PS(0.52)S(0.565)DDGIRPLPEYSTEK 97.819 1.2779e-07 11985000.0 3859.3 4356.3 3978.8 4045.2 5225.4 4236.0 4228.7 5015.5 4775.2 4276.4 4772.0 True False 4251.093294933499 4723.420689436181 4248.82529446806 4295.062816684234 4858.3859306513705 4201.503420441325 4389.62549253343 4915.461917916367 4574.514950205315 4006.387374185008 4185.074252200365 1.0157748796687236 1.1286348592149287 1.0152329536887372 1.0262811500718396 1.1608840459872372 1.0039256575274196 1.0488763706463557 1.174522032752941 1.0930546686955902 0.9573037735420322 1.0 12.031037504171502 -10.769869461904067 1.1126011103514923 1.001562885684989 1.0758279076555124 0.26169375906266157 0.05878905281434522 0.6203369126461638 1.4070413286598868 0.03391980793300829 0.009368063683201562 1.6987541788947678e-11 10.769869461904067 0.07426502197052343 SYQNS(ph)PSSDDGIRPLPEYSTEK ddPTM_A549_MK2206_60min_R1 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.002)YQNS(0.333)PS(0.333)S(0.333)DDGIRPLPEYSTEK 79.875 3.2152e-05 9706500.0 1747.9 2391.0 2237.2 2201.4 2974.4 2355.8 2136.6 2458.8 2971.7 3157.1 3828.8 True False 2042.9027879478735 2512.691687213283 2554.4686005242816 2740.743098824603 2536.8697001638557 2605.089192346521 2524.792563401634 2807.342429759192 2298.6146948297633 2443.9089172988233 2878.003290495771 0.7098333746505059 0.8730676908921953 0.8875836274962157 0.9523071456782374 0.8814686586848374 0.9051724162197753 0.8772722990760403 0.9754479569325276 0.798683831398191 0.8491682151196673 1.0 11.490852526211881 -8.84579438677731 0.015055485573242391 1.7916789060940406 3.0144916590465445e-06 0.134867734616535 0.07200632612449205 562.5430866990256 6.464379763019578 387.19972898614446 381.04902014780447 1.4262826958273467e-09 8.84579438677731 -1.7916758916023816 SYQNS(ph)PSSDDGIRPLPEYSTEK ddPTM_A549_PD325901_60min_R1 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 SYQNS(0.333)PS(0.333)S(0.333)DDGIRPLPEYSTEK 147.28 1.454e-27 14850000.0 3500.6 3362.2 2796.7 3437.5 4072.4 3449.2 3920.9 3554.2 3904.0 3755.4 4304.1 True False 3855.978334994484 3645.5443936419247 2986.5008799232974 3649.826567871071 3786.3686730173085 3421.1108587786134 4070.111995098805 3483.3086927840395 3739.928456525705 3518.283403099425 3774.722985937885 1.0215261753933476 0.965777994099913 0.7911841189536344 0.9669124281352313 1.0030851766137032 0.9063210390599268 1.0782544865573829 0.9227984956142579 0.9907822297048547 0.9320639994527323 1.0 11.882155058509692 -6.510857037901034 24.848637261917155 0.9896820292947414 0.9216116231873192 0.0707907428034783 0.0686358073530634 676.4920155042157 1398293.7795239657 0.008719133735123594 0.0192929995471275 3.084203048519199e-07 6.510857037901034 -0.06807040610742221 SYQNSPS(ph)S(ph)DDGIRPLPEYSTEK ddPTM_A549_PD325901_60min_R1 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 2 S(0.005)Y(0.003)QNS(0.367)PS(0.801)S(0.824)DDGIRPLPEYSTEK 86.625 1.4802e-06 12168000.0 3438.9 4217.9 3873.9 3909.2 5293.7 3520.8 3441.6 4587.1 4582.0 4845.0 5348.5 True False 3788.0145964156227 4573.35723572134 4136.806149653117 4150.662405562643 4921.888774273581 3492.1277721175193 3572.5719713157814 4495.6066919896675 4389.434474334214 4539.085873147129 4690.668406934965 0.8075639264577295 0.9749905213849298 0.881922530174381 0.8848765347441859 1.0492936927702596 0.7444840413265087 0.7616338784540552 0.9584149426003112 0.9357801689508923 0.9676842358833706 1.0 12.19557780200009 -9.112448290824704 1.2114137144999721 0.9808225426123987 0.8825853232385228 0.1815245257373468 0.08591906555710781 0.49549600735822835 1.4997583399166514 0.019644383761560982 0.017937011557408154 7.718834142399331e-10 9.112448290824704 -0.09823721937387586 SYQNSPS(ph)SDDGIRPLPEYSTEK ddPTM_A549_MK2206_60min_R1 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 SYQNS(0.08)PS(0.46)S(0.46)DDGIRPLPEYSTEK 128.92 3.1475999999999996e-22 8232000.0 2524.0 2693.8 2765.1 2191.2 3688.0 3103.6 2650.4 2930.9 3863.5 3605.3 4489.6 True False 2949.9894941246257 2830.902913849913 3157.2327584970885 2728.0440983667063 3145.50008546406 3432.0208919970546 3131.943372666711 3346.364050504808 2988.423418741729 2790.860226010405 3374.7084133435596 0.8741464840222639 0.838858522607925 0.935557201331358 0.8083792032461383 0.9320805533973802 1.0169829424156713 0.9280634025396215 0.991600944624822 0.8855352974868987 0.8269929973728617 1.0 11.720547138293282 -6.9529057842446855 10.725397590837353 0.9523636773518545 0.8677588777167852 0.27053667385572844 0.058587648472315394 0.4421837444752043 98.46075806408402 0.007457770154891321 0.014097905341835457 1.11453629464083e-07 6.9529057842446855 -0.08460479963506928 SYQNSPSS(ph)DDGIRPLPEYSTEK ddPTM_A549_PD325901_60min_R1 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.001)YQNS(0.126)PS(0.126)S(0.747)DDGIRPLPEYSTEK 89.565 5.409000000000001e-07 14534000.0 3601.1 2731.9 3249.7 3168.4 4130.6 3277.9 3016.0 3789.0 3689.3 3307.4 4050.4 True False 3966.681021010292 2962.1268006038854 3470.244184033591 3364.1048720415133 3840.4809057964085 3251.2058691842803 3130.775530418525 3713.425422587004 3534.2515508863403 3098.5701995555833 3552.2264776010816 1.1166745831164187 0.8338789261557142 0.9769208708722718 0.947041212955934 1.0811475366260974 0.9152586102505241 0.8813558341958043 1.0453796924273773 0.9949398139932564 0.8722895961431307 1.0 11.794507850498723 SYS(ph)AGEASEVSR ddPTM_A549_MK2206_60min_R1 2 SYSAGEASEVSR 12 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.003)YS(0.968)AGEAS(0.029)EVSR;SYS(1)AGEASEVSR 291.68 8.837899999999998e-110 86173000.0 7542.200000000001 8117.5 7098.9 7339.7 9152.2 7982.3 8128.4 7748.5 11589.9 11191.4 11860.0 True False 8815.138970913922 8530.64607735417 8105.630765359297 9137.926829491655 7805.923503846027 8826.981687778092 9605.225064286175 8846.87360378603 8964.806155267186 8663.254967235136 8914.83468065186 0.9888168750953609 0.9569045734374069 0.909229509656662 1.02502482175289 0.875610573103219 0.9901453031917196 1.0774428700436465 0.9923766307171878 1.0056054291981185 0.9717796546510576 1.0 13.12199232899411 -7.509361521380126 24.97990727470197 1.0080504571954987 0.9511836906746661 0.29190433719463216 0.04350578023252256 574.9971890208535 1062599.03490085 0.005803478755292317 0.0090393270368371 3.0948419757572224e-08 7.509361521380126 -0.05686676652083256 SYS(ph)AGEASEVSR ddPTM_A549_PD325901_60min_R1 2 SYSAGEASEVSR 12 0 Q76N89-2;Q76N89 Q76N89-2 HECW1 E3 ubiquitin-protein ligase HECW1 1 S(0.105)YS(0.892)AGEAS(0.001)EVS(0.002)R;S(0.004)YS(0.996)AGEASEVSR 143.98 8.8704e-12 105795000.0 2664.14 2551.38 2443.63 2920.44 2995.84 2689.6 2708.67 2625.4700000000003 3239.6 3239.12 2715.99 True False 2934.6015315637906 2766.3937466688885 2609.469426540912 3100.828945999531 2785.4225334869316 2667.6967893340393 2811.749919091096 2573.102941208631 3103.450878012466 3034.601410408324 2381.9404480791422 1.232021368934865 1.161403404900311 1.0955225302317089 1.3018079224021402 1.169392180116496 1.119967878074088 1.1804450952409677 1.0802549422608978 1.3029086770473914 1.2740038957965991 1.0 11.217921628873816 -11.058168199790938 1.365317541164856 0.9999792185229686 1.1926905177987626 0.0 0.10650032673489751 0.3057952255363015 1.0166772809896685 0.05385414509338221 0.011954174096561316 8.746449645853033e-12 11.058168199790938 0.192711299275794 SYS(ph)AGNASQLEQLSR ddPTM_A549_MK2206_60min_R1 2 SYSAGNASQLEQLSR 15 0 Q14678;Q14678-2 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 S(0.003)YS(0.997)AGNASQLEQLSR;S(0.018)YS(0.982)AGNAS(0.001)QLEQLSR 184.22 2.7636999999999997e-33 18168200.0 4930.0 5081.799999999999 4236.0 5129.3 8508.1 6229.9 6132.4 6667.4 10450.3 9146.1 10003.099999999999 True False 5762.063473072266 5340.441913877231 4836.72849625463 6385.97873026303 7256.569760611918 6889.1438829270655 7246.577700928666 7612.524368056137 8083.323735699935 7079.989657757682 7519.054198484712 0.7663282270572639 0.7102544778774798 0.6432628850087766 0.8493061177228877 0.9650907639519754 0.9162247938464667 0.9637618654735913 1.0124311073047274 1.0750452812707398 0.9416064136343752 1.0 12.876335485265697 -6.786242641330086 0.9692658263127414 1.0296272726677325 0.6938395933103039 0.8043954124321815 0.05745538220072307 0.15283096807109323 0.27217879470465467 0.009133779735767072 0.03037852190558974 1.6359022836740502e-07 6.786242641330086 -0.3357876793574286 SYS(ph)AGNASQLEQLSR ddPTM_A549_PD325901_60min_R1 2 SYSAGNASQLEQLSR 15 0 Q14678;Q14678-2 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 S(0.017)YS(0.983)AGNASQLEQLSR;S(0.001)YS(0.998)AGNAS(0.001)QLEQLSR 310.2 8.8026e-143 100334000.0 15569.7 17603.5 16169.8 18771.199999999997 19658.4 19602.5 18840.1 20142.6 20087.8 21391.3 23000.0 True False 17150.324482192653 19087.008724488624 17267.17986490641 19930.654391511696 18277.661801798313 19442.863739188157 19557.0703151983 19740.840041435982 19243.579623206195 20040.649667337897 20171.14580901265 0.8502404694595848 0.9462530738318482 0.8560336645423127 0.9880774538155636 0.9061290803634808 0.9638948586897285 0.96955673715174 0.9786672620558617 0.9540151960335337 0.9935305538460564 1.0 14.300005417195374 -2.0000000000000004 0.19784034713154242 0.9932282576838407 0.4263620943775886 0.5663634535874374 0.03310808707011306 25.894874903084368 0.28620864051853523 0.024783829969364058 4.592921435906743 0.00999999999999999 2.0000000000000004 -0.5668661633062522 SYS(ph)CSSPK ddPTM_A549_MK2206_60min_R1 1 SYSCSSPK 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 SYS(0.998)CS(0.002)SPK 91.584 0.0026065999999999997 10988000.0 2683.4 2528.5 2756.1 1653.7 3319.0 3908.6 2847.8 2770.1 4814.3 4640.7 4649.9 True False 3136.2923171687853 2657.189849903297 3146.956423165103 2058.856574237413 2830.7794966527154 4322.205457681303 3365.208397479724 3162.770158075457 3723.8687368573346 3592.3626468938737 3495.201499288625 0.8973137365062105 0.7602393883282872 0.900364806951931 0.589052326355562 0.8099045211639045 1.2366112393122393 0.9628081236989174 0.9048892198973857 1.065423191657262 1.0277984395534918 1.0 11.771159914410083 -7.078941612343738 11.278662795342237 1.0281828030173454 0.7813192594186151 0.5503743235938916 0.10876897135083026 0.4225752059526136 59.36307581332671 0.015116307508678846 0.02619593333372531 8.337932743760646e-08 7.078941612343738 -0.2468635435987303 SYS(ph)EHDDER ddPTM_A549_PD325901_60min_R1 1 SYSEHDDER 9 0 Q9UBU9-2;Q9UBU9;E9PQA4 Q9UBU9-2 NXF1 Nuclear RNA export factor 1 1 S(0.073)YS(0.927)EHDDER 84.507 0.0013477 6427300.0 589.58 522.23 709.37 606.71 599.95 430.21 628.19 614.12 503.66 788.54 782.74 True False 649.4337275741441 566.2401548663444 757.5121139883403 644.1850987616167 557.8115817151399 426.7065123956707 652.0961142087576 601.8708948321798 482.49292172482996 738.7514498269217 686.467942197677 0.9460510646644757 0.8248603030952442 1.1034923372579069 0.9384052177284568 0.812582128641502 0.62159714411368 0.9499294491759069 0.8767647516143786 0.7028630065085983 1.0761630724689968 1.0 9.423048538388416 -6.682740433264875 6.383217619452069 0.8439775647933573 0.9563950972617109 0.0843777382442672 0.13486961429028602 0.3608138561388175 23.315535924048444 0.01982433103831958 0.04144322618935083 2.0761540110122416e-07 6.682740433264875 0.11241753246835362 SYS(ph)EPEKMNEVGIVEEAEPAPLGPQR ddPTM_A549_MK2206_60min_R1 1 SYSEPEKMNEVGIVEEAEPAPLGPQR 26 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.184)Y(0.05)S(0.766)EPEKMNEVGIVEEAEPAPLGPQR 40.254 0.0214 1053800.0 464.58 706.01 621.16 613.91 931.55 811.41 448.76 316.51 799.96 1032.2 1118.4 True False 542.9897461095162 741.942893387474 709.2498283129189 764.317977559467 794.5202290168227 897.2728676296335 530.2938831564719 361.37626177122235 618.7703372736207 799.0253031059664 840.6704137302736 0.6459008634550718 0.8825609671396429 0.8436716895576147 0.9091767297578477 0.9451031177501887 1.0673301367276624 0.6307987940284705 0.42986675380628864 0.7360439087275304 0.9504620241843447 1.0 9.71539649004882 -10.794958405141372 1.1890549096270788 0.9936571511704265 0.7912564145667437 0.1556131508449381 0.1671550046864583 0.6895575017302668 1.8104717259484517 0.10604626840728712 0.030183420803896004 1.603398949995393e-11 10.794958405141372 -0.20240073660368285 SYS(ph)FDEIRK ddPTM_A549_PD325901_60min_R1 2 SYSFDEIRK 9 1 P43490 P43490 NAMPT Nicotinamide phosphoribosyltransferase 1 S(0.001)YS(0.999)FDEIRK;S(0.014)YS(0.986)FDEIRK 125.23 3.2188000000000004e-05 20496000.0 9298.0 6642.6 5987.4 6748.0 6471.2 6932.6 6211.799999999999 6215.2 7378.1 7805.1 8552.3 True False 10241.92611517417 7202.395214206726 6393.740969161068 7164.808634180072 6016.685236428058 6876.1432040962045 6448.193448227389 6091.232960269918 7068.024115033885 7312.284653973301 7500.421317496478 1.3655134400626927 0.9602654183446286 0.8524509088904352 0.9552541558520837 0.8021796352149898 0.9167675938491616 0.8597108316016165 0.8121187733895294 0.9423502781831834 0.9749165206114082 1.0 12.872755922349372 -5.264603792331453 4.860071670040044 0.9310049564693006 1.3878457836282916 0.7893057794330313 0.06717534998205504 0.06735615683081828 4.648158955409616 0.01059516910248676 0.1031539576975961 5.437461659274037e-06 5.264603792331453 0.456840827158991 SYS(ph)GGTR ddPTM_A549_MK2206_60min_R1 2 SYSGGTR 7 0 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 S(0.006)YS(0.965)GGT(0.029)R;S(0.001)YS(0.928)GGT(0.071)R 103.8 0.010274 69715000.0 8633.1 10296.1 8251.9 9398.4 10894.1 8339.9 7604.700000000001 8898.5 10619.7 13097.9 12488.0 True False 10090.156220969617 10820.12751180121 9422.143502890358 11701.008421910212 9291.592321327009 9222.42268242243 8986.375553168775 10159.889625513324 8214.354906176144 10139.075293113377 9386.884948733596 1.0749206234098887 1.1526856428831567 1.0037561506665231 1.2465273076015297 0.9898483226408945 0.9824795693982216 0.9573330878398745 1.0823494355157741 0.8750884826051224 1.0801320510997912 1.0 13.196430761538654 -6.976278908136085 24.144772679962934 0.9566017817585499 1.1141555322434864 0.2894231960806174 0.08146637662138127 101.82866982911297 103646.54679568044 0.010900237777970636 0.02059858722135019 1.0561390286274431e-07 6.976278908136085 0.15755375048493647 SYS(ph)GGTR ddPTM_A549_PD325901_60min_R1 2 SYSGGTR 7 0 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 SYS(0.812)GGT(0.188)R;SYS(0.735)GGT(0.265)R 114.64 0.0073565 102705000.0 6693.700000000001 7650.2 7806.299999999999 7306.9 9136.0 8208.3 8189.3 9114.5 8216.5 8814.8 9282.8 True False 7373.239496358504 8294.909202379238 8336.082461095302 7758.230617826072 8494.318877488988 8141.45432625319 8500.948292856912 8932.704147313078 7871.189078648425 8258.232023656825 8141.074448517513 0.9056838311681535 1.0188961241952208 1.0239535965198427 0.95297379564424 1.0433903941310598 1.0000466618673098 1.0442047111367385 1.0972389705808083 0.9668489249698197 1.0143909229525159 1.0 12.991003496752283 -5.2549610256751835 24.31535285107371 1.001675024360897 0.9056837667726266 0.3430245009170969 0.03957287230004928 496.7456119595769 1864370.3152884056 0.005712843173435284 0.07502943031153582 5.559541473016915e-06 5.2549610256751835 -0.09599125758827032 SYS(ph)LSELSVLQAK ddPTM_A549_MK2206_60min_R1 2 SYSLSELSVLQAK 13 0 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 SYS(0.5)LS(0.5)ELSVLQAK;SYS(0.5)LS(0.5)ELSVLQAK 270.21 6.228099999999999e-83 28085000.0 16385.9 18134.3 17062.5 16985.0 25605.0 20186.0 20661.5 21370.3 31692.0 27087.0 28401.0 True False 19151.43932320789 19057.258412142124 19482.21906688966 21146.32576248563 21838.538418738408 22322.06912161766 24415.427103212045 24399.605468798953 24513.81260172458 20968.027887261473 21348.24787227602 0.8970965410270965 0.8926848950864441 0.9125910090349997 0.9905415137111736 1.0229663131792237 1.0456159800639329 1.1436735815176302 1.1429324605362854 1.148282179801722 0.9821896397639114 1.0 14.38183004706698 -6.601576378845222 1.2558198587501708 1.0823634876785648 0.8904905664440397 0.6748507256123183 0.05240862815398543 0.23926417672293843 0.7298254650350506 0.00967036127617504 0.031334571419272816 2.5027854478261244e-07 6.601576378845222 -0.19187292123452515 SYS(ph)LSELSVLQAK ddPTM_A549_PD325901_60min_R1 3 SYSLSELSVLQAK 13 0 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 SYS(0.979)LS(0.021)ELSVLQAK;S(0.048)YS(0.476)LS(0.476)ELSVLQAK;SYS(0.5)LS(0.5)ELSVLQAK 266.97 1.0445999999999996e-82 50297000.0 21877.5 22330.2 23403.9 22403.5 27279.8 25480.4 25140.2 25932.8 25231.6 25966.2 26407.7 True False 24098.487694635733 24212.04432184371 24992.229393083584 23787.31331295986 25363.76095820095 25272.89607039971 26096.924068245306 25415.549960111955 24171.203597252545 24326.6897005806 23159.720312202768 1.0405344870222086 1.0454376821246187 1.079124836404664 1.0270984706333615 1.0951669802694846 1.091243578493628 1.1268238008252172 1.0974031472530608 1.0436742443956386 1.0503878877916741 1.0 14.499330210310342 -9.437430013566107 1.287358955536857 1.0108806071635639 1.07472223152825 0.2467219091348376 0.03090971131983395 0.25959121360970727 0.8892465639136371 0.007625299107752982 0.006079846512809909 3.6523297970487496e-10 9.437430013566107 0.06384162436468621 SYS(ph)PAHNR ddPTM_A549_MK2206_60min_R1 4 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.077)YS(0.923)PAHNR;S(0.001)YS(0.999)PAHNR;S(0.009)YS(0.991)PAHNR;S(0.011)YS(0.989)PAHNR 97.431 0.0012558 41547000.0 1634.75 2010.47 1238.65 1245.81 1903.4 1184.03 1618.6999999999998 1766.73 2183.3 2302.4 2141.5 True False 1910.6558341997743 2112.7943355883276 1414.309195440461 1551.0335059265356 1623.4123814187328 1309.3232687044951 1912.7968372078183 2017.1693878837054 1688.7860360136706 1782.2862409137545 1609.7064476067424 1.1869591732334013 1.3125339335812187 0.8786131145484375 0.9635505332245891 1.0085145548322603 0.8133925726961914 1.1882892312767341 1.2531287247328637 1.0491267140816272 1.1072119662337179 1.0 10.652581901451788 -5.748159281895626 24.9999999965483 1.0237937068790917 1.2497466170508078 0.3250459823282913 0.12244226075999685 195.3169991855572 367680.72622859327 0.016395296590274878 0.06275113571712922 1.7858324825956838e-06 5.748159281895626 0.22595291017171615 SYS(ph)PAHNR ddPTM_A549_PD325901_60min_R1 2 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.001)YS(0.999)PAHNR;S(0.001)YS(0.999)PAHNR 95.775 0.00076898 60932000.0 3092.69 3170.9 2382.21 2423.7 3537.9 3647.6 2515.3999999999996 3239.3 2765.7 3220.38 3237.8 True False 3406.6576120819554 3438.1228712745187 2543.881095992448 2573.4064443779225 3289.4101090924114 3617.895154957925 2611.124923479694 3174.689620318312 2649.4672469808247 3017.0446572065125 2839.57112610527 1.1997084984993829 1.2107894884782184 0.8958680670491294 0.9062658866754936 1.1584179310923395 1.2740991488810485 0.9195490472045648 1.1180172918128968 0.9330519044313603 1.0625001182290028 1.0 11.471457333770944 -8.762135788122746 24.999889786886367 0.9683856189917177 1.0804378575548066 0.07079028193536596 0.12706742106892058 27.593186110532397 990549.5974178184 0.02177119856904592 0.023856287477069776 1.7292755929627782e-09 8.762135788122746 0.11205223856308888 SYS(ph)PDGK ddPTM_A549_MK2206_60min_R1 2 SYSPDGK 7 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.001)YS(0.999)PDGK;S(0.013)YS(0.987)PDGK 125.04 0.0060544 2593000000.0 18521.3 16602.3 15287.9 14736.9 21232.7 18669.2 18718.6 19761.4 21742.9 19901.4 21145.0 True False 21647.242637690335 17447.286155843194 17455.954102429456 18347.441161564577 18109.397956787612 20644.76235238802 22119.527322517013 22562.63896674935 16818.167866276577 15405.659917877425 15894.11292768833 1.3619660773882996 1.0977200322673661 1.0982653880620366 1.154354523906926 1.1393777079084513 1.2988936498886847 1.3916805186393073 1.4195594978719521 1.0581381888245238 0.969268306319883 1.0 13.956204879476909 -8.946287406392877 13.672962575781662 1.025632854998568 1.2357697007101824 0.4716203455073362 0.11107581216041419 1.0073221437252817 255.62330912862734 0.02065076541298922 0.02195425762964072 1.1316512138675267e-09 8.946287406392877 0.2101368457116144 SYS(ph)PDGK ddPTM_A549_PD325901_60min_R1 2 SYSPDGK 7 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.011)YS(0.989)PDGK;S(0.032)YS(0.968)PDGK 128.93 0.0057452 4355500000.0 24051.0 23142.0 24129.0 21992.7 26106.0 19008.3 21320.0 20829.3 23275.0 23554.0 24188.0 True False 26492.63981458958 25092.25755685606 25766.5390394641 23351.13912995436 24272.40462081078 18853.50270698178 22131.34426675165 20413.843271230253 22296.83269099276 22066.79642024922 21213.029340365152 1.2488852671399524 1.182870072644897 1.214656267430617 1.1007922892710431 1.144221517415436 0.8887699349524986 1.0432901360598736 0.9623256982153807 1.0510913992168622 1.0402472964226508 1.0 14.372663040127827 -6.678395909057305 1.5228157460658673 1.0139072452830586 1.213954144756638 0.718294130367908 0.05598138301683758 0.15597128207798572 0.7227270193398911 0.007997517483775312 0.021728753719741537 2.097027331911538e-07 6.678395909057305 0.20004689947357934 SYS(ph)PDGKES(ph)PSDK ddPTM_A549_MK2206_60min_R1 2 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.477)Y(0.003)S(0.522)PDGKES(0.911)PS(0.087)DK;S(0.137)Y(0.014)S(0.856)PDGKES(0.839)PS(0.154)DK 56.93600000000001 0.004255600000000001 25626000.0 9269.2 8518.099999999999 9160.2 8686.599999999999 11369.4 9619.7 8993.8 9765.0 12068.4 12870.4 12294.9 True False 10833.614349817735 8951.634906253224 10459.254100895101 10814.817389956297 9696.976320953108 10637.650268959937 10627.857042367134 11149.218654058288 9334.926669274666 9962.967701118998 9241.737008022475 1.1722487169255518 0.9686095696601816 1.1317411534017616 1.1702147962626808 1.0492590638032064 1.151044469208084 1.1499847954060378 1.2063986071427897 1.0100835655863498 1.0780405991287616 1.0 13.173948319998578 -8.859309231075919 9.831153234239453 1.004496431054494 1.1205930143399072 0.271891183562901 0.06608252716413057 0.21408445886546568 19.79990803418894 0.010487151298016119 0.0111540410080422 1.3825815876477221e-09 8.859309231075919 0.11609658328541328 SYS(ph)PDGKES(ph)PSDK ddPTM_A549_PD325901_60min_R1 1 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.087)Y(0.001)S(0.912)PDGKES(0.859)PS(0.141)DK 87.566 0.00061147 9494300.0 2709.4 2568.5 3159.3 3117.6 3803.1 3408.6 3348.7 3405.3 3480.6 3799.1 3375.6 True False 2984.456293445138 2784.9565091515346 3373.7090964142303 3310.167071416683 3535.9833759827447 3380.8414917177283 3476.13661097895 3337.3786200938275 3334.322486112544 3559.224177641539 2960.4225996914415 1.008118332077387 0.9407293774347638 1.1396038851905348 1.1181400492489466 1.1944184510519857 1.142013134229588 1.1742028355482965 1.1273318277065156 1.126299497396106 1.2022689524166277 1.0 11.531587419624769 -5.758374762684545 24.99939570851289 1.0952771310288312 0.9744238331617991 0.3790874764811968 0.06432560962272828 74.59221277187831 608447.7025542991 0.010307897176411368 0.03676897952862506 1.7443162926958744e-06 5.758374762684545 -0.12085329786703203 SYS(ph)PDGKES(ph)PSDKK ddPTM_A549_MK2206_60min_R1 7 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.024)YS(0.976)PDGKES(0.507)PS(0.493)DKK;S(0.006)YS(0.994)PDGKES(0.748)PS(0.252)DKK;S(0.015)YS(0.985)PDGKES(0.501)PS(0.499)DKK;S(0.243)YS(0.756)PDGKES(0.861)PS(0.139)DKK;S(0.007)YS(0.993)PDGKES(0.904)PS(0.096)DKK;S(0.001)YS(0.999)PDGKES(0.663)PS(0.337)DKK;S(0.013)YS(0.987)PDGKES(0.884)PS(0.116)DKK 185.09 3.6381999999999997e-26 1252476000.0 86935.8 92594.79999999999 86172.2 79002.0 119194.4 95025.4 86582.7 87523.4 130738.8 136870.3 132647.6 True False 101608.43766375567 97307.47981563222 98392.71372166029 98357.49354653478 101661.06165586694 105080.92475524453 102313.65584537803 99930.10997917109 101126.670546963 105951.20416944828 99707.54003248205 1.0190647330247478 0.9759289997921125 0.9868131706950806 0.9864599358733807 1.0195925165012445 1.0538914581686798 1.0261376001458564 1.0022322278397053 1.0142329307695148 1.0626197791554401 1.0 16.605414987043087 -6.7564232098462655 24.970178153279736 1.012384912655383 0.990538760781247 0.21939037922995142 0.022972301318383216 144.06693399721894 717147.1028259431 0.00269286220754509 0.005471312368540546 1.7521722186638088e-07 6.7564232098462655 -0.021846151874135966 SYS(ph)PDGKESPS(ph)DK ddPTM_A549_PD325901_60min_R1 2 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.011)YS(0.988)PDGKES(0.175)PS(0.826)DK;S(0.014)YS(0.983)PDGKES(0.218)PS(0.784)DK 107.72 2.337e-05 78962000.0 24064.0 24080.0 24148.0 26818.0 28192.0 24712.0 26791.0 25369.0 26513.0 28296.0 29043.0 True False 26506.959565019504 26109.306108767363 25786.828493720383 28474.486951902938 26211.891177120135 24510.753665237477 27810.54616559774 24862.995393404486 25398.75081144108 26509.38573097442 25470.89511874586 1.040676405027915 1.0250643327234956 1.0124037013030611 1.1179225079901696 1.0290918734861785 0.9623043693976131 1.0918558627776676 0.9761335546902717 0.9971675786434502 1.0407716575089763 1.0 14.63656204040553 -8.005453427560452 0.9530150740447281 0.9974373900495915 1.041451819910978 0.06837195367716675 0.04263416158977697 0.6529621854511066 1.1842101734962434 0.007544203847815421 0.011429243098691975 9.87521528920112e-09 8.005453427560452 0.04401442986138637 SYS(ph)PDGKESPS(ph)DKK ddPTM_A549_PD325901_60min_R1 2 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.116)YS(0.884)PDGKES(0.324)PS(0.676)DKK;S(0.012)YS(0.988)PDGKES(0.134)PS(0.866)DKK 174.2 8.069100000000001e-23 1484580000.0 28337.7 30337.6 31239.6 30167.8 35120.0 33755.0 29650.6 33408.9 34622.4 36508.0 37964.0 True False 31214.52244288784 32894.256021816465 33359.70711497548 32031.19648995515 32653.292357422608 33480.110471434586 30778.969808430873 32742.533280724958 33167.34093063923 34202.87864950576 33294.66867362419 0.9375231436862375 0.9879736706277865 1.001953419089069 0.962051816882324 0.9807363658581869 1.0055697144677491 0.9244413906065917 0.9834167025864826 0.9961757317895814 1.0272779400445287 1.0 15.02300356303542 -8.657746398724491 4.4622307300798 0.9981944882285045 0.9733498107124078 0.26442937639128783 0.02487698825736615 0.2571804676946307 9.016202798615922 0.003788732135696171 0.00428180540447736 2.1991436626092094e-09 8.657746398724491 -0.024844677516096758 SYS(ph)PDGKESPSDK ddPTM_A549_MK2206_60min_R1 4 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.005)YS(0.988)PDGKES(0.006)PSDK;S(0.001)YS(0.88)PDGKES(0.12)PSDK;S(0.028)YS(0.972)PDGKESPSDK;SYS(1)PDGKESPSDK 194.48 2.3433e-30 679331000.0 28820.5 30731.800000000003 29265.2 27750.5 37994.5 29440.4 29142.9 26744.2 41300.6 42592.2 39389.0 True False 33684.69580642579 32295.917353869154 33415.4454175144 34549.37374576726 32405.559381009793 32555.763587044108 34437.78769819222 30535.272250677488 31946.080043505804 32970.59243843239 29607.62421890358 1.1377034360264247 1.0907973269009938 1.1286094814787482 1.1669080062056625 1.0945004955959896 1.0995736552971458 1.1631391780568712 1.0313313903511931 1.0789815422984594 1.1135845346679878 1.0 14.853681109675907 -9.719029401537986 0.3408210830345642 0.9831667297723676 1.132454109650012 0.10987113804430004 0.046007636489359134 0.7308245292093631 0.18337158869416306 0.04159017979058205 0.015925852091249894 1.9097239667498362e-10 9.719029401537986 0.1492873798776444 SYS(ph)PDGKESPSDK ddPTM_A549_PD325901_60min_R1 4 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.037)Y(0.001)S(0.949)PDGKES(0.007)PS(0.007)DK;S(0.002)YS(0.997)PDGKES(0.001)PSDK;SYS(0.999)PDGKESPS(0.001)DK;SYS(0.996)PDGKES(0.003)PS(0.001)DK 207.08 1.2203e-31 1042592000.0 18439.6 19194.300000000003 19260.100000000002 18531.199999999997 21297.6 20258.399999999998 21076.9 20268.6 19978.399999999998 19038.6 21688.6 True False 20311.57461748393 20811.871023401716 20567.20620638994 19675.830136591234 19801.730048731333 20093.422307051118 21878.99296322222 19864.326872590897 19138.777324757448 17836.49954685219 19021.03969536313 1.0678477592597317 1.0941500231701395 1.0812871712477277 1.0344245347107774 1.0410435163309457 1.056378758935528 1.150252210900742 1.0443344417935965 1.006189862976997 0.9377247423126032 1.0 14.215308486018666 -8.630293854867714 4.126802250711403 1.0029561325017096 1.0738525042529858 0.5527694307467703 0.035270612917641046 0.12431889402091609 3.891966616328867 0.005089726355651443 0.005772573228647241 2.3426431860328873e-09 8.630293854867714 0.07089637175127628 SYS(ph)PDGKESPSDKK ddPTM_A549_MK2206_60min_R1 7 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 SYS(0.998)PDGKES(0.001)PS(0.001)DKK;S(0.001)YS(0.985)PDGKES(0.006)PS(0.009)DKK;S(0.002)YS(0.989)PDGKES(0.007)PS(0.001)DKK;SYS(0.996)PDGKES(0.002)PS(0.002)DKK;S(0.099)YS(0.884)PDGKES(0.015)PS(0.002)DKK;S(0.003)YS(0.98)PDGKES(0.017)PSDKK;S(0.157)Y(0.021)S(0.792)PDGKES(0.025)PS(0.005)DKK 155.79 1.9971e-19 8046091200.0 55466.2 63576.9 61358.0 57707.50000000001 81990.19999999998 59047.9 54466.5 50719.700000000004 89599.7 93405.7 90892.8 True False 64827.53854160666 66812.69265110412 70059.48703333129 71845.840090588 69929.5501917611 65296.30958517619 64362.35802420445 57909.37279756684 69305.51101131953 72305.28749692383 68321.60924633683 0.9488584835270474 0.9779145044755572 1.0254367220878604 1.0515829601077513 1.0235348810304916 0.9557197247762012 0.9420497955799444 0.8475996604349851 1.0144010332285236 1.0583077344712954 1.0 16.060054336129156 SYS(ph)PDGKESPSDKK ddPTM_A549_PD325901_60min_R1 8 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.003)YS(0.994)PDGKES(0.003)PSDKK;S(0.001)YS(0.995)PDGKES(0.003)PS(0.001)DKK;S(0.002)YS(0.985)PDGKES(0.013)PS(0.001)DKK;S(0.007)YS(0.959)PDGKES(0.03)PS(0.004)DKK;SYS(0.998)PDGKES(0.002)PSDKK;S(0.027)YS(0.971)PDGKES(0.001)PS(0.001)DKK;S(0.153)Y(0.052)S(0.794)PDGKESPSDKK;S(0.234)Y(0.013)S(0.746)PDGKES(0.005)PS(0.002)DKK 164.53 4.9989999999999994e-20 14189757000.0 75418.31000000001 83266.39999999998 78183.85 94082.09999999999 89603.05 94508.3 87386.52999999998 91393.98 102181.8 93903.4 96857.7 True False 83074.72131117476 90283.5517514561 83489.87621868307 99893.3376410482 83309.64088174148 93738.6557389269 90712.07221889407 89571.05537170974 97887.45429278126 87974.32329834545 84944.81693154809 0.9779845823685707 1.0628494475914896 0.9828719306789787 1.1759791974305651 0.9807501374554224 1.1035241363162303 1.0678941399331459 1.0544616918050416 1.1523652393254653 1.035664405154215 1.0 16.374238300881522 SYS(ph)PDHR ddPTM_A549_MK2206_60min_R1 2 SYSPDHR 7 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 S(0.009)Y(0.001)S(0.99)PDHR;S(0.058)YS(0.942)PDHR 111.82 0.0080023 73569000.0 4766.4 6189.9 5685.0 5149.700000000001 6783.9 5435.4 5135.1 5808.5 7951.900000000001 9011.6 10099.6 True False 5570.851792708247 6504.939470799459 6491.218484704335 6411.37673117882 5785.997296577986 6010.570420273487 6068.081200188963 6631.872662785209 6150.807346574958 6975.873301171985 7591.590585220201 0.7338187867446304 0.8568612068548184 0.8550538140639273 0.844536682952964 0.762158763914711 0.7917405914875406 0.799316181776543 0.8735814436169104 0.8102132586746374 0.9188948248543679 1.0 12.890186474518558 -10.787305569907298 0.5738869085369965 1.034206285148634 0.8116427950300112 0.5768067112487915 0.046285300997464536 0.5016278113874724 0.22261321022329333 0.05998314722890888 0.008700726659116517 1.6319033355083892e-11 10.787305569907298 -0.22256349011862275 SYS(ph)PDHR ddPTM_A549_PD325901_60min_R1 5 SYSPDHR 7 0 A0A024RAC6;Q14241 A0A024RAC6 TCEB3 Transcription elongation factor B polypeptide 3 1 SYS(1)PDHR;S(0.001)YS(0.999)PDHR;S(0.124)Y(0.012)S(0.864)PDHR;S(0.005)YS(0.995)PDHR;S(0.224)Y(0.003)S(0.773)PDHR 123.72 0.0062193000000000005 172236800.0 11640.800000000001 11741.099999999999 11457.9 13525.4 15065.800000000001 14719.3 12463.400000000001 14878.000000000002 14114.300000000001 14949.3 16788.1 True False 12822.565446495972 12730.563702394027 12235.501995949922 14360.83323958789 14007.630182188439 14599.430900968366 12937.701507234166 14581.246618434798 13521.125054800395 14005.398646736492 14723.27012853415 0.870904719845182 0.864655989549618 0.8310315499976559 0.9753833974529988 0.9513939539179697 0.9915888775737545 0.8787247258447363 0.9903538066706997 0.9183506745961306 0.9512423887131976 1.0 13.845810517945363 -2.0000000000000004 0.20149346591496461 0.9791490986017818 0.35908177280965287 0.4111156407398836 0.04366969404098678 36.03938623955756 0.40199465587675665 0.035755323997630296 7.162704861297134 0.00999999999999999 2.0000000000000004 -0.620067325792129 SYS(ph)PER ddPTM_A549_MK2206_60min_R1 3 SYSPER 6 0 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8 B7Z8L1 PPHLN1 Periphilin-1 1 S(0.001)YS(0.999)PER;S(0.004)YS(0.996)PER;S(0.126)YS(0.874)PER 98.458 0.034143 996545100.0 12100.1 12881.6 10976.4 10610.4 16233.5 11347.4 10855.0 11256.3 15785.6 16191.0 18340.0 True False 14142.301060957749 13537.218418237822 12533.018570889828 13209.948476318958 13845.573654387415 12548.174336205497 12827.212990604108 12851.914995972995 12210.186804423303 12533.441854862138 13785.671841750021 1.0258695566891178 0.981977416380988 0.9091336798641527 0.9582375547568541 1.0043452225850886 0.9102330651889774 0.930474273423279 0.9322661342518588 0.8857157594194758 0.9091643844955387 1.0 13.750881958043163 -7.264681991878825 24.98026533202001 0.9400946776375204 0.9715577181761962 0.23999655533071784 0.03902855182985944 590.0044157313962 4545236.5619141385 0.007417476371989442 0.01217222132951409 5.4364826720223123e-08 7.264681991878825 0.03146304053867577 SYS(ph)PER ddPTM_A549_PD325901_60min_R1 4 SYSPER 6 0 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;F8VWU8 B7Z8L1 PPHLN1 Periphilin-1 1 S(0.001)YS(0.999)PER;SYS(1)PER;S(0.028)YS(0.972)PER;S(0.002)YS(0.998)PER 109.36 0.024844 1517094900.0 17743.7 17986.8 17579.2 18374.4 21018.1 18902.3 18274.4 17936.7 19382.699999999997 20851.9 21063.9 True False 19545.027361778444 19502.610760680094 18772.230224317107 19509.344956709876 19541.861164508668 18748.365935837603 18969.842292135396 17578.938447431054 18568.1125241549 19535.307475392477 18473.17383506355 1.0580221642628855 1.0557260454975306 1.0161886848423374 1.0560905846985313 1.0578507699319466 1.0148968500611257 1.0268859299168793 0.9515927584714671 1.0051392733018703 1.0574960020304098 1.0 14.17314413340315 -7.606601541801555 2.028353685249705 0.998983378466348 1.0473739021256119 0.3317769519161644 0.026627184412091758 0.17693912344103654 1.4757374320038201 0.003080612954098989 0.004946313153105575 2.4739929527821562e-08 7.606601541801555 0.048390523659263884 SYS(ph)PGRR ddPTM_A549_PD325901_60min_R1 1 SYSPGRR 7 1 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 1 S(0.003)YS(0.997)PGRR 47.869 0.024439 13098000.0 1536.6 1360.4 1536.7 1663.9 1804.7 1650.3 1635.8 1524.2 1460.1 1778.7 1956.0 True False 1692.5945008148674 1475.0456823242155 1640.9897029277843 1766.675324008924 1677.9440978770103 1636.8605039552206 1698.0512641441064 1493.7986352882308 1398.737074634523 1666.3925784451587 1715.424400105598 0.9866913987644543 0.8598721588858214 0.9566085820084921 1.0298765272897898 0.9781510031999776 0.954201481484383 0.9898723977807345 0.8708041200744701 0.8153883520302146 0.9714170897549196 1.0 10.744349831428508 -8.255203101887492 24.635555020671518 0.9072350675654629 0.9632511682344546 0.13837931886074473 0.05971144134865058 743.010892345345 2935159.8799534864 0.012471188129122558 0.015897617040646985 5.55644344211071e-09 8.255203101887492 0.05601610066899165 SYS(ph)PRK ddPTM_A549_MK2206_60min_R1 2 SYSPRK 6 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 S(0.007)Y(0.001)S(0.992)PRK;S(0.006)Y(0.002)S(0.991)PRK 55.717 0.032938 30919200.0 3203.8 4023.7 3481.2000000000003 3055.29 4653.2 3111.0 3292.7 3041.7 5279.4 5265.0 5141.4 True False 3744.5231146103315 4228.48914338774 3974.886506412092 3803.8361871571815 3968.7204440567643 3440.2039550853324 3890.940968600846 3472.870289815574 4083.6243294694154 4075.632843298692 3864.648484578708 0.9689168703317472 1.0941458609394574 1.028524721529855 0.9842644686407602 1.0269292174678601 0.8901725393170796 1.0068033313060825 0.8986251411153006 1.0566612580069046 1.0545934150445726 1.0 11.916121482093505 -3.829417266681646 15.507832823875825 1.009479170882915 1.0037369864278776 0.0 0.061049841327009406 0.0 0.0 0.007774012184946651 0.0 0.00014810943776221146 3.829417266681646 -0.00574218445503738 SYS(ph)PRK ddPTM_A549_PD325901_60min_R1 1 SYSPRK 6 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 S(0.11)Y(0.008)S(0.883)PRK 47.849 0.044123 42667000.0 3181.1 2754.3 2547.2 2962.1 3621.4 3627.8 2827.1 2852.7 3632.8 3649.3 3750.0 True False 3504.042930197953 2986.4145272166925 2720.0683095579166 3145.0621895828044 3367.045357151773 3598.256399593258 2934.6868375484805 2795.8006606001445 3480.1260494022986 3418.8825752065677 3288.7737732085843 1.0654557509376354 0.9080632275606768 0.827076745660183 0.9563023809066769 1.0237996254351134 1.0941027409382242 0.892334663288606 0.8501042800133113 1.0581834718315173 1.039561493422835 1.0 11.68333405674688 -8.820841304747608 24.999972915867325 1.027475552815872 0.9517778535230162 0.16394919427083787 0.08065814238922622 106.78068664769651 44939.145519989586 0.014619156757664807 0.01556328147824327 1.5106320523584131e-09 8.820841304747608 -0.07569769929285586 SYS(ph)PSFQR ddPTM_A549_MK2206_60min_R1 2 SYSPSFQR 8 0 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 S(0.002)YS(0.499)PS(0.499)FQR;S(0.004)YS(0.899)PS(0.097)FQR 85.86200000000001 0.0034977 6651700.0 1281.1 1644.1 1087.9 945.42 1708.9 1186.0 1156.6 1275.1 1736.6 1685.5 1822.2 True False 1497.318360112146 1727.77766748112 1242.1805786297011 1177.0479424415157 1457.5230737661423 1311.5017327969156 1366.7392487271038 1455.849329829976 1343.2628727803503 1304.7443793694106 1369.697449838434 1.0931745257237397 1.261430155750764 0.9069014319740651 0.859348860275937 1.064120455169182 0.9575119913902277 0.9978402521581103 1.0628984744052086 0.9807004261698802 0.9525785271216756 1.0 10.419641538561999 -5.762411290655161 24.999996939333467 0.9856698671647969 1.1773023498122073 0.5639801151517787 0.06789117702692343 12.263637088739964 315499.0406175189 0.008634399385278426 0.02929819954090778 1.7281789436979306e-06 5.762411290655161 0.1916324826474104 SYS(ph)PSFQR ddPTM_A549_PD325901_60min_R1 1 SYSPSFQR 8 0 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 S(0.004)YS(0.774)PS(0.222)FQR 99.01299999999999 0.0024203000000000002 18352000.0 4664.8 4550.3 4660.1 5240.8 4840.2 5286.5 4537.3 5136.9 4242.1 4721.7 5337.1 True False 5138.367061955745 4933.769750279239 4976.36240945778 5564.512313279624 4500.2410497835135 5243.448496733488 4709.969434405832 5034.440499679906 4063.8192893001233 4423.571056189635 4680.67053466441 1.0977843930483242 1.0540732815395595 1.0631729733172877 1.1888280262559823 0.9614522142618968 1.1202344745055695 1.0062595518151594 1.0755810438687199 0.8682130603305722 0.9450720838882524 1.0 12.192499504158896 -8.743111273937258 24.988144053508428 0.9377672800513019 1.0698726386935686 0.4772982217830146 0.06205462543958625 160.1615361435103 218360.66400853367 0.011426273567143515 0.012944222766671135 1.8067111553094716e-09 8.743111273937258 0.1321053586422667 SYS(ph)SER ddPTM_A549_PD325901_60min_R1 1 SYSSER 6 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 S(0.001)YS(0.499)S(0.499)ER 89.75200000000001 0.037860000000000005 201750000.0 5684.6 5841.8 5391.0 5668.2 7101.0 5340.2 5816.6 6176.4 5795.7 6250.8 5672.1 True False 6261.696407218659 6334.10898779888 5756.865678716524 6018.311840583798 6602.250257120101 5296.711181737665 6037.953895965649 6053.206856707932 5552.1268840896555 5856.1234212317995 4974.467658404378 1.2587671359445878 1.2733239861550578 1.1572827635114447 1.2098403796868278 1.3272274965876156 1.0647794991266766 1.2137889540330025 1.2168552038892082 1.1161248329174118 1.1772362036242936 1.0 12.28032642887664 -9.522509322719092 0.310963053133509 0.9594108757877325 1.253907879300037 0.18279171406066852 0.08183611224105838 0.7731102325185079 0.1816361839398034 0.08493812629852684 0.03919039097990764 3.0025529663045683e-10 9.522509322719092 0.29449700351230457 SYS(ph)SERR ddPTM_A549_MK2206_60min_R1 3 SYSSERR 7 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SYS(0.942)S(0.057)ERR;S(0.001)YS(0.5)S(0.5)ERR;SYS(0.993)S(0.007)ERR 93.14299999999999 0.005097 145309000.0 5619.2 6855.4 6552.8 5431.0 7733.099999999999 5270.5 5205.5 3803.52 8392.5 11294.9 10939.2 True False 6567.583583750039 7204.310578219126 7482.085573715139 6761.595243806856 6595.5712339756265 5828.2208117252485 6151.271968916604 4342.680607791479 6491.612150068582 8743.37424535126 8222.694733439028 0.7987142654149387 0.8761495849920751 0.9099310890489376 0.8223089221967156 0.8021179732179016 0.7087969334461327 0.7480846812786786 0.5281335071495732 0.7894750274103336 1.0633222476075632 1.0 13.005395554659836 -10.369508848894663 1.0081891756010106 0.9860297830856982 0.7789156453140539 0.48484335091462083 0.09851047900596169 0.39003305474749556 0.7708840699402165 0.04847786819449674 0.019087246273724476 4.270622178172226e-11 10.369508848894663 -0.20711413777164434 SYS(ph)SERR ddPTM_A549_PD325901_60min_R1 2 SYSSERR 7 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SYS(0.871)S(0.129)ERR;SYS(0.701)S(0.299)ERR 90.709 0.0052262 200625000.0 3461.0 3797.3 2797.5 4199.3 4107.3 4319.6 4165.8 4667.799999999999 4109.3 4094.2 4008.3999999999996 True False 3812.358172146463 4117.311797625509 2987.3551727340905 4458.681223697741 3818.817417415775 4284.422609758815 4324.331798613228 4574.697067181737 3936.6004114756865 3835.6915132794547 3515.3922113411463 1.084475911349881 1.1712240199948347 0.8497928518748108 1.2683310867314928 1.0863133294474898 1.218760909788862 1.2301136085647368 1.3013333341364088 1.1198182663020255 1.091113390109069 1.0 11.77946994402826 -10.061604750506007 1.0798938684791208 1.0153247420384188 1.1476276506192047 0.08741842303888836 0.11844253578675772 0.5726317456055908 1.3417038110219108 0.04073827470172803 0.021559293471756887 8.677512530904718e-11 10.061604750506007 0.13230290858078586 SYS(ph)SPDITQAIQEEEK ddPTM_A549_MK2206_60min_R1 3 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.002)YS(0.811)S(0.187)PDITQAIQEEEK;SYS(0.885)S(0.115)PDITQAIQEEEK;S(0.002)YS(0.874)S(0.123)PDITQAIQEEEK 231.91 2.1745999999999996e-55 73196000.0 4246.5 4451.4 4770.3 3987.0 6646.0 4618.6 4415.3 5396.8 6856.0 6991.900000000001 6768.199999999999 True False 4963.205383042877 4677.957246533335 5446.800270463517 4963.815178983229 5668.382203902966 5107.337186421448 5217.502857431076 6161.812927006836 5303.126946782269 5412.424933914555 5087.469147182793 0.9755745419687257 0.9195057721625247 1.0706306245571446 0.9756944043055205 1.1141850770813728 1.0039052893813925 1.0255596066504482 1.2111745051896707 1.042389996550426 1.0638737606716904 1.0 12.312732424882967 -5.759786715576929 24.999830086023188 1.03828312327 0.9475401439626244 0.2646601170053602 0.06443402437211378 45.970057459493475 695322.1343878785 0.008787398997911342 0.030835113412457357 1.738654481951601e-06 5.759786715576929 -0.09074297930737563 SYS(ph)SPDITQAIQEEEK ddPTM_A549_PD325901_60min_R1 2 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.005)YS(0.947)S(0.048)PDITQAIQEEEK;S(0.001)YS(0.996)S(0.003)PDITQAIQEEEK 460.57 0.0 162723000.0 30335.2 30838.6 31020.0 31111.4 35476.0 32940.0 32125.0 32261.0 35041.0 35698.0 36636.0 True False 33414.80717240605 33437.47705007612 33125.2037384134 33033.08051888407 32984.28814555594 32671.747561222182 33347.53445447454 31617.52904673511 33568.34862835994 33444.022187741204 32130.004254738582 1.0399876360887186 1.0406932033052785 1.0309741472732001 1.0281069450531524 1.026588352869308 1.0168609783611748 1.0378938698570634 0.984049948952998 1.0447663922549661 1.0408969112666342 1.0 14.97163355140421 SYS(ph)SPDITQAIQEEEKR ddPTM_A549_MK2206_60min_R1 4 SYSSPDITQAIQEEEKR 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 SYS(0.868)S(0.132)PDITQAIQEEEKR;S(0.001)YS(0.983)S(0.015)PDIT(0.001)QAIQEEEKR;S(0.01)YS(0.495)S(0.495)PDITQAIQEEEKR;SYS(0.87)S(0.13)PDITQAIQEEEKR 339.99 4.533599999999998e-196 718201700.0 35070.840000000004 37627.0 34138.5 32307.960000000003 46814.0 36399.9 34375.59999999999 33629.77 53743.3 55581.0 56509.200000000004 True False 40989.940392284356 39542.053582088745 38979.8526367773 40223.41165035944 39927.72261413082 40251.7132577019 40621.201555026295 38396.89288435123 41570.52836041473 43025.213497319026 42476.40606542096 0.965004909529135 0.9309180612217332 0.9176824559201556 0.9469589208750024 0.9399976672375546 0.9476252109396296 0.9563238823092205 0.9039581367880659 0.9786733909735438 1.0129202887610784 1.0 15.374374084228757 -8.933543510375454 6.840402922929166 0.9907173165075754 0.9387965119463376 0.6854027939023364 0.017706024398653757 0.0900565195754593 7.3344162199812555 0.0028909399532305634 0.003054017438223677 1.1653502928056334e-09 8.933543510375454 -0.05192080456123782 SYS(ph)SPDITQAIQEEEKR ddPTM_A549_PD325901_60min_R1 3 SYSSPDITQAIQEEEKR 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.085)YS(0.457)S(0.457)PDITQAIQEEEKR;SYS(0.974)S(0.026)PDITQAIQEEEKR;SYS(0.63)S(0.369)PDIT(0.001)QAIQEEEKR 236.66 3.1134999999999996e-74 1191631200.0 15281.100000000002 15135.4 14432.5 16442.1 16765.699999999997 17045.7 15472.5 17787.6 16964.0 18772.9 18138.3 True False 16832.426022648757 16410.913275690917 15411.976239672837 17457.691174281565 15588.135070525072 16906.885470683832 16061.314454376881 17432.812363897752 16251.06207389909 17587.57589019685 15907.40408815715 1.058150401496387 1.031652505006057 0.9688555187421716 1.0974569500801568 0.9799295337024996 1.0628312059584115 1.0096753917463073 1.0958929733152531 1.0216036497116325 1.1056219979531774 1.0 13.95741080260334 -9.443253431736492 1.9021821740535938 1.006353492509837 1.0358922109460749 0.0 0.049551251124630366 0.49948093338233224 3.6691044524465455 0.007911166367275024 0.006672207092666451 3.603682894074096e-10 9.443253431736492 0.0295387184362379 SYSFDEIRK ddPTM_A549_MK2206_60min_R1 1 SYSFDEIRK 9 1 P43490 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 81.594 0.0018241 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SYSLS(ph)ELSVLQAK ddPTM_A549_PD325901_60min_R1 1 SYSLSELSVLQAK 13 0 Q9P0V3-2;Q9P0V3 Q9P0V3-2 SH3BP4 SH3 domain-binding protein 4 1 S(0.001)YS(0.016)LS(0.983)ELSVLQAK 258.23 3.6789999999999994e-69 10666000.0 13104.0 13056.0 14391.0 13606.0 16084.0 15544.0 15173.0 15669.0 15743.0 15459.0 15005.0 True False 14434.308433345059 14156.27494003598 15367.659800113062 14446.411718532003 14954.31532678774 15417.414817596778 15750.416817984176 15356.469502907288 15081.376457757204 14482.916101750561 13159.480124531952 1.0968752790193108 1.0757472792292 1.1678014370388852 1.0977950178746763 1.1363910416878742 1.171582362805927 1.1968874658370576 1.1669510769106828 1.1460465242576297 1.1005690167616466 1.0 13.683814874961925 -10.576083937549043 0.8687171452574942 0.9999890772710475 1.1402202493372913 0.28668160204190574 0.045303895424615735 0.2943302877374198 0.39722590374096733 0.02584543744028283 0.007160391330472361 2.6540925470455054e-11 10.576083937549043 0.1402311720662438 SYSPDGKESPSDKK ddPTM_A549_MK2206_60min_R1 4 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 0 ;;; 60.401 0.0023414 35820800.0 9267.9 10405.3 11078.0 9255.2 14473.0 10291.2 10052.7 8539.7 14394.4 15442.800000000001 15070.699999999999 False True 10832.09494159969 10934.885325370291 12649.026978637576 11522.72441548171 12344.040872267173 11380.207953254316 11879.145465743528 9750.228626734408 11134.091383133415 11954.260754509613 11328.229259839796 0.956203718440006 0.9652775446676414 1.1165934841626306 1.017169069514812 1.0896708204898866 1.0045884217402619 1.0486321554116855 0.8607019158148902 0.9828624693009499 1.0552629612546056 1.0 13.467634747530655 SYSPDGKESPSDKK ddPTM_A549_PD325901_60min_R1 3 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 0 ;; 83.729 9.6964e-05 52170000.0 10705.1 10703.6 11161.0 10908.7 13047.0 12351.0 12486.900000000001 13013.8 13357.599999999999 13273.0 13440.9 False True 11791.873871321899 11605.629936287463 11918.452576545194 11582.505623544772 12130.623729706525 12250.417550960992 12962.095812593872 12754.229549871403 12796.226524305263 12434.940514815655 11787.754508885138 1.0003494611661328 0.9845496805638091 1.0110876136385043 0.9825879572580463 1.0290868986593626 1.0392494636469667 1.0996238344481608 1.0819897496387267 1.0855525125383276 1.0549032477256541 1.0 13.52500129995078 -6.987915272764902 2.935949330645886 1.0495643207176233 0.9951316234979259 0.5432095212545079 0.027077013757009882 0.25552435265515044 4.501107287621149 0.00566561122852385 0.01100931642131966 1.0282168751061396e-07 6.987915272764902 -0.054432697219697346 SYSPS(ph)FQR ddPTM_A549_MK2206_60min_R1 1 SYSPSFQR 8 0 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 SYS(0.37)PS(0.63)FQR 88.177 0.0039986 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 SYSPY(ph)DMLESIR ddPTM_A549_MK2206_60min_R1 1 SYSPYDMLESIR 12 0 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.003)Y(0.002)S(0.019)PY(0.973)DMLES(0.003)IR 53.683 0.023469 1419600.0 658.84 414.16 547.51 423.51 815.81 687.79 648.17 566.03 1065.4 763.06 991.48 True False 770.0360849085054 435.2389749796125 625.1551508461688 527.2699690120863 695.8054296969722 760.5714812819484 765.934098951623 646.2664858941739 824.0886010941992 590.6842160318138 745.268152544073 1.0332335848243128 0.5840031852882291 0.8388325043974006 0.7074902734165943 0.9336309720491166 1.0205339899278338 1.0277295445095889 0.8671596709024213 1.1057611925064315 0.7925794413935894 1.0 9.54161580023454 -6.976941773972261 3.5723591710358917 1.0314132628230863 0.7799651786884776 0.20489451130660363 0.13585105768900116 0.13864125136996625 3.7877019249276778 0.015935846089263895 0.030530026163981167 1.0545282679234683e-07 6.976941773972261 -0.25144808413460873 SYSPY(ph)DMLESIR ddPTM_A549_PD325901_60min_R1 2 SYSPYDMLESIR 12 0 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 SYS(0.032)PY(0.901)DMLES(0.067)IR;SYS(0.028)PY(0.972)DMLESIR 86.898 0.00029802 3789200.0 2265.8999999999996 2018.62 2242.0 2746.0 2780.7 2023.83 2129.9900000000002 2344.8 2362.3999999999996 2811.7 2863.5 True False 2495.9324999325822 2188.7361917475055 2394.155602241224 2915.614183381514 2585.3932248942224 2007.3485994786981 2211.047935025252 2298.031124539985 2263.116543467295 2634.168782152277 2511.307653222076 0.9938776305365186 0.8715523918143989 0.9533501796044214 1.1609944244149861 1.0295007947660624 0.7993240481321415 0.8804369039326653 0.9150735162183528 0.9011705676776219 1.0489231690798881 1.0 11.294223064601368 SYSPY(ph)DMLESIRK ddPTM_A549_PD325901_60min_R1 1 SYSPYDMLESIRK 13 1 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.01)Y(0.008)S(0.127)PY(0.855)DMLESIRK 59.898 0.0032999 1743700.0 996.43 1008.3 846.64 1089.0 1072.3 1442.4 1027.7 1396.7 1139.5 930.25 1097.3 True False 1097.5868400670033 1093.2729796291571 904.0980816599074 1156.2650567015548 996.9853472341762 1430.6535726261952 1066.8096858790182 1368.8417228100473 1091.6107777179914 871.5138562425423 962.3390563578085 1.1405406782730723 1.136057995782586 0.9394797765786131 1.2015152550055523 1.0360021664375698 1.4866419098075783 1.1085590664028566 1.4224110657949816 1.134330743937008 0.9056203741132414 1.0 9.910401471238911 -9.927457365825052 1.168715721617057 1.0216181183015953 1.1773983826878482 0.2204089362498397 0.15298129955624756 0.5591419934160305 1.5418992168029264 0.04538224570503838 0.02724910979113927 1.1817963223957678e-10 9.927457365825052 0.15578026438625292 SYSPYDMLESIR ddPTM_A549_MK2206_60min_R1 3 SYSPYDMLESIR 12 0 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;; 117.14 6.2396e-05 10977100.0 6573.5 8251.3 7184.0 6430.7 9981.7 8131.6 6905.800000000001 7808.3 10666.699999999999 10137.5 10599.900000000001 False True 7682.946093355081 8671.255925848165 8202.799224998404 8006.221788685088 8513.405152678031 8992.080514680772 8160.494469876912 8915.15043691586 8250.709481219725 7847.431709200479 7967.6522876426425 0.9642672415902079 1.088307523070098 1.0295127007136669 1.0048407610736558 1.068496069523744 1.128573410341583 1.0242031372947031 1.1189181097602277 1.0355257964778517 0.9849114175541247 1.0 12.959938973503895 -9.665400857563966 1.3019269623524379 1.0076698412964775 1.053993950099892 0.17637835694792003 0.046758075648422555 0.5109236491604031 1.7621076357485568 0.011682484065692658 0.00839216128837931 2.1607232367947093e-10 9.665400857563966 0.04632410880341453 SYSPYDMLESIR ddPTM_A549_PD325901_60min_R1 1 SYSPYDMLESIR 12 0 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 78.653 0.0026857 3787300.0 2339.4 2484.3 2652.2 2816.9 2326.8 1992.4 2834.5 2463.7 2309.7 2617.9 2851.2 False True 2576.894165824743 2693.6606796516094 2832.19424097421 2990.8935153559332 2163.3735950242312 1976.1745549781158 2942.3684485979147 2414.5595707647385 2212.63134119811 2452.605347226392 2500.520475245951 1.0305431174568886 1.0772400011588232 1.1326418915628498 1.1961083882193564 0.865169318324195 0.7903052882555339 1.176702401650402 0.9656227952011642 0.8848683156575536 0.9808379381437196 1.0 11.288012703110834 -6.762636546931768 24.999971171988935 0.9471857615041601 1.108534433886134 0.36862142661763486 0.09884500373843257 26.836868899387945 560443.1027593325 0.01456166185035206 0.028645470957197144 1.7272828185276805e-07 6.762636546931768 0.16134867238197392 SYSPYDMLESIRK ddPTM_A549_MK2206_60min_R1 1 SYSPYDMLESIRK 13 1 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 56.122 0.016499 2025300.0 847.77 902.51 755.29 895.17 1174.7 822.05 945.24 954.82 1148.9 1421.2 1104.9 False True 990.8528500134842 948.4439040681139 862.4014792106135 1114.486690185709 1001.9031861156807 909.0387853673732 1116.9778726152579 1090.1686590136133 888.6759844162999 1100.149932933732 830.5228363113196 1.1930470863561724 1.1419841364995194 1.0383838246289285 1.3419097482443532 1.2063523630072943 1.0945379773117065 1.3449092833812957 1.31262935990476 1.0700199266804769 1.3246474206777181 1.0 9.697876027294278 -8.926410896898096 6.306886930961184 1.0303865929392493 1.2062673775989692 0.0 0.12847237045393178 0.14960773249763795 9.813931703227365 0.016731070126371234 0.01766655003010957 1.1846473931792368e-09 8.926410896898096 0.1758807846597199 SYSPYDMLESIRK ddPTM_A549_PD325901_60min_R1 3 SYSPYDMLESIRK 13 1 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;; 111.39 4.4335e-05 14931800.0 5692.1 5846.8 6364.4 7018.9 7764.5 8251.900000000001 7441.200000000001 8359.1 9050.400000000001 8565.0 8513.2 False True 6269.957801697452 6339.530355346384 6796.32645624623 7452.441511921532 7219.148306070842 8184.699262308722 7724.378937980883 8192.371192912911 8670.043161613792 8024.204438287956 7466.13036962116 0.8397868094038649 0.8491052314249984 0.9102876751120921 0.9981665391545631 0.9669196690490084 1.0962438180307348 1.0345893462308813 1.0972713825419849 1.1612499022105505 1.0747474315393066 1.0 12.866144985101062 -6.349582179081747 0.8543151155195046 1.0783414037586154 0.8189975208670472 0.8109588281600758 0.04328476075761145 0.34837179243118155 0.4048376377727166 0.010057409076635401 0.05955283560999824 4.4711353902438286e-07 6.349582179081747 -0.2593438828915682 SYSS(ph)ER ddPTM_A549_MK2206_60min_R1 2 SYSSER 6 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 S(0.006)YS(0.457)S(0.537)ER;SYS(0.265)S(0.735)ER 113.14 0.021308 290440000.0 14043.099999999999 14390.400000000001 12886.5 12672.2 11627.400000000001 8774.7 8206.6 10141.2 10687.8 18328.0 18281.4 True False 16413.231959168595 15122.809893631967 14713.999472848263 15776.889568876679 9917.024862723638 9703.232929825543 9697.632992048979 11578.746156122466 8267.030364909497 14187.692070651177 13741.623839027736 1.1944172065424463 1.100511123778655 1.070761333974146 1.1481095504934842 0.7216778001562076 0.7061198184065616 0.7057123019556557 0.8426039230703974 0.6016050549593865 1.0324611004382582 1.0 13.746264876142806 -6.757121755120932 24.988832528138673 0.788685928452457 1.1223336373686648 0.6155638392724054 0.12401417609870456 65.89667991501732 381380.7621226455 0.0212898170231922 0.04312618316583228 1.7493561851943477e-07 6.757121755120932 0.33364770891620776 SYSS(ph)ER ddPTM_A549_PD325901_60min_R1 1 SYSSER 6 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SYS(0.197)S(0.803)ER 92.18700000000001 0.03682 215640000.0 4676.5 4564.7 4060.0 4049.5 5091.4 4145.2 4626.2 4200.6 4325.4 4671.0 4256.1 True False 5151.254837342654 4949.3832888160405 4335.536014763325 4299.628417918228 4733.797628376469 4111.44286553668 4802.252572553778 4116.815737693051 4143.618479983676 4376.0722628421545 3732.6266816408174 1.3800616232744243 1.3259786501446622 1.1615241449373865 1.151904217763391 1.2682215587377061 1.1014878304758138 1.2865611758534519 1.1029272651191973 1.110107930258429 1.1723841241252893 1.0 11.86597550948903 -2.0000000001101683 0.08926612366949414 0.858765080077293 2.168654463966667 0.4153321821893826 0.08326903845513117 52.96970987824849 0.3302535840443076 0.6272557270236543 8.521336295746831 0.009999999997463281 2.0000000001101683 1.309889383889374 SYSS(ph)ERR ddPTM_A549_PD325901_60min_R1 1 SYSSERR 7 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SYS(0.179)S(0.821)ERR 73.157 0.015449000000000001 44129000.0 2653.9 2629.6 2554.2 2670.3 2772.2 2774.0 2542.4 2726.5 2857.9 3127.8 3363.3 True False 2923.321974302081 2851.2056205820013 2727.5433716523353 2835.238366308688 2577.4902355708127 2751.409463716769 2639.1524232546612 2672.1178186021266 2737.7924016149605 2930.310174206313 2949.635421715318 0.9910790848185791 0.9666298416378265 0.9247052539347971 0.9612165440635697 0.8738334970468691 0.9327964545925905 0.8947385171147355 0.9059146086088818 0.9281799308006807 0.9934482589384669 1.0 11.52632093141197 -10.527258533550292 0.903948620366633 0.9987179235401011 0.9298050868866861 0.3833569368469567 0.03189130681466879 0.4623278715330571 0.6946934050195406 0.01983894793463604 0.006040354606664811 2.969897538765157e-11 10.527258533550292 -0.06891283665341508 SYSS(ph)PDITQAIQEEEK ddPTM_A549_MK2206_60min_R1 1 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.001)YS(0.32)S(0.679)PDITQAIQEEEK 205.68 6.3814e-40 35119000.0 1440.8 1382.1 1395.2 1297.0 2290.7 1838.1 1292.8 1413.6 2192.5 2087.7 2185.8 True False 1683.971815822012 1452.4429865735995 1593.060339465169 1614.7650582245426 1953.7410644719398 2032.6065219679676 1527.685025725748 1613.9821289684373 1695.9022507030522 1616.0871200293786 1643.0055349889421 1.0249337448722262 0.8840158816527509 0.9696013224178764 0.9828116971227431 1.1891262828186937 1.2371270082067298 0.9298112472494072 0.9823351745308027 1.0321950928269186 0.9836163577137647 1.0 10.682121625137322 -6.5346123366271245 24.99851591173433 1.0354800371692583 0.9560067725514401 0.15758917031006536 0.09162018045583603 351.99042311655353 749917.1662383314 0.013512724337625535 0.028145720642390938 2.920032353386565e-07 6.5346123366271245 -0.07947326461781823 SYSS(ph)PDITQAIQEEEKR ddPTM_A549_PD325901_60min_R1 1 SYSSPDITQAIQEEEKR 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 SYS(0.322)S(0.676)PDIT(0.002)QAIQEEEKR 176.49 2.8051999999999995e-30 9314700.0 1571.3 2138.0 1543.5 2295.2 2549.7 2610.2 2336.6 2403.2 2278.9 2226.1 2507.7 True False 1730.8172192700765 2318.176763311651 1648.2511918195062 2436.969291222598 2370.6178679874843 2588.943396609051 2425.5205916365812 2355.2662907260697 2183.125758088224 2085.5436660913974 2199.268797620044 0.7869966695945007 1.0540670452926373 0.7494541793177687 1.1080816014212465 1.0779118362215965 1.1771837073352271 1.1028759168780902 1.0709315265486599 0.9926598151397912 0.9482895716741332 1.0 11.102808227779107 -6.275751246280304 24.994941795126724 1.0340666678654329 0.8825620609677512 0.4359493024662181 0.09557197867495572 656.6507354644099 1146806.2999282132 0.01331444888360756 0.031070040711627916 5.299669096225344e-07 6.275751246280304 -0.15150460689768164 SYSSSS(ph)SSPERNR ddPTM_A549_PD325901_60min_R1 1 SYSSSSSSPERNR 13 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 S(0.017)YS(0.031)S(0.13)S(0.13)S(0.673)S(0.01)S(0.01)PERNR 44.925 0.01522 1658600.0 760.44 717.52 721.97 696.75 1124.3 725.85 708.51 589.31 770.28 747.92 883.55 True False 837.6393089936603 777.9879285366591 770.9672257582956 739.7866650659399 1045.3330466244377 719.9389182548007 735.4727357615485 577.5557497452481 737.9078103208554 700.6962035591738 774.8789512849188 1.0809937572890205 1.0040122102253326 0.9949518237395187 0.9547125571538778 1.349027541516061 0.929098560569989 0.9491453272049445 0.7453496430475165 0.9522878497309069 0.9042653725427259 1.0 9.597827145296094 SYSSSSS(ph)SPER ddPTM_A549_MK2206_60min_R1 2 SYSSSSSSPER 11 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 SYSS(0.001)S(0.005)S(0.044)S(0.475)S(0.475)PER;SYS(0.002)S(0.007)S(0.006)S(0.048)S(0.469)S(0.469)PER 83.86200000000001 0.00056977 12269700.0 1630.26 1631.5 1880.63 1279.55 1802.71 1377.98 1287.39 1291.47 1544.8000000000002 2477.0 2442.2 True False 1905.4080319697339 1714.5363813000718 2147.331612821376 1593.0398074411814 1537.533747035498 1523.796928970905 1521.2920987539223 1474.5398274609995 1194.9052665386894 1917.4439796487877 1835.7343387089356 1.037954126472243 0.9339784875985367 1.1697398515362443 0.8677943065343321 0.8375578724080736 0.8300748625983567 0.8287103785528361 0.8032424934089523 0.6509140464077505 1.044510602224349 1.0 10.84214157655189 -6.43066550111557 6.840532667741524 0.8292424392411423 1.0353305125248464 0.3475829776439826 0.11137699557582481 0.22506462413290257 14.302844988694243 0.018183956762553282 0.04244415120175951 3.709663345534708e-07 6.43066550111557 0.20608807328370415 SYSST(ph)LR ddPTM_A549_MK2206_60min_R1 1 SYSSTLR 7 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 SYS(0.001)S(0.013)T(0.986)LR 94.11399999999999 0.012784 30692000.0 2750.9 2217.0 2543.5 2649.7 2976.7 2539.5 2426.9 2399.3 4385.5 4168.6 4420.9 True False 3215.18466695223 2329.835830427372 2904.2065463228632 3298.8766189495536 2538.8313732106462 2808.22820441633 2867.83631569757 2739.4081225480854 3392.1912522044377 3226.9103647815655 3323.0685193671015 0.9675348697187205 0.7011097775591769 0.873953254167623 0.9927200115566214 0.7640021138336871 0.8450708097199193 0.8630084811623947 0.8243610104885295 1.020800874984817 0.9710634451185346 1.0 11.698300325369425 -8.764919246541062 24.991977710946525 1.009822645948445 0.851171508975957 0.39853530896286404 0.07794396236089628 52.98821998522973 380553.9491595443 0.012414245798731313 0.013475898513432037 1.7182278476816194e-09 8.764919246541062 -0.158651136972488 SYSST(ph)LR ddPTM_A549_PD325901_60min_R1 2 SYSSTLR 7 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 SYSS(0.005)T(0.995)LR;SYSS(0.004)T(0.996)LR 99.755 0.012025 89329000.0 13342.5 12998.7 14180.9 14162.2 14985.3 12898.2 12852.2 15280.3 14738.4 15272.1 15150.400000000001 True False 14697.020777770631 14094.146067941625 15143.301150679123 15036.966929310158 13932.784224478513 12793.161335584582 13341.2975039937 14975.522429336552 14118.996302166612 14307.816999647115 13286.996846298498 1.106120589007661 1.0607473028691192 1.1397083423631393 1.1317054638647837 1.0486029601459506 0.9628331731822839 1.0040867517561223 1.1270810554537345 1.0626175700568403 1.0768285087410854 1.0 13.697727440179284 -2.000001173499115 0.009989057422114611 3.1907867299596466e-07 2.2771129659303737 0.0817894265540079 0.05357024780959351 10335.748948210807 7.7634134429031105 759.6021446656529 1029.5509458787267 0.009999972979220813 2.000001173499115 2.277112646851701 SYST(ph)DDEEDTQQSTGK ddPTM_A549_MK2206_60min_R1 1 SYSTDDEEDTQQSTGK 16 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 SYS(0.018)T(0.982)DDEEDTQQSTGK 181.26 6.4136e-34 4031800.0 800.72 1124.9 1173.1 1031.0 1502.5 1388.8 1444.5 1540.8 2343.8 1963.7 1871.0 True False 935.8619602755423 1182.152605163623 1339.4632197724984 1283.5950462833496 1281.4842403497148 1535.7618941891706 1706.9469520891414 1759.2131185020999 1812.9330422795038 1520.0988061511198 1406.3790630269507 0.6654407654941094 0.8405647070849271 0.9524197671782533 0.9126949341244224 0.911194054319591 1.0919971255002539 1.2137175509533527 1.2508811918144915 1.2890785208203588 1.0808599517113189 1.0 10.45776978280153 -7.159298367425654 1.6647329437424638 1.1563580000985918 0.840819339600001 0.6981198666265791 0.09916753312360814 0.21555480575284322 1.168398966296067 0.02029269167381976 0.04052079331867735 6.92949574733061e-08 7.159298367425654 -0.3155386604985908 SYST(ph)DDEEDTQQSTGK ddPTM_A549_PD325901_60min_R1 2 SYSTDDEEDTQQSTGK 16 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 SYS(0.025)T(0.975)DDEEDTQQSTGK;S(0.129)Y(0.007)S(0.106)T(0.757)DDEEDTQQSTGK 313.54 5.480299999999998e-144 21354700.0 5190.3 5322.2 5586.0 5229.6 5954.900000000001 5493.4 6037.0 6346.5 4969.2 5378.6 4576.0 True False 5717.215435103088 5770.720472262522 5965.099551346785 5552.620514716666 5536.648367289752 5448.663571730965 6266.741338573156 6219.914078767064 4760.361804858484 5038.994278082383 4013.181009653996 1.4246094111753032 1.4379417370860268 1.4863769007670744 1.3835958311771726 1.3796159091680502 1.3576919552404467 1.5615396672858908 1.5498713025414534 1.1861816831603385 1.2556110142953232 1.0 11.970530513254664 -8.998531253854953 2.6062771334702366 1.0713332597588 1.4443863430250579 0.6665433214237944 0.09116863105226386 0.08171536250089648 1.116270740369528 0.01630345707700874 0.01641651166590458 1.0033876380988098e-09 8.998531253854953 0.37305308326625797 SYSYRPYS(ph)YR ddPTM_A549_PD325901_60min_R1 2 SYSYRPYSYR 10 1 H0YGW5;F5H7J9;O75581 H0YGW5 LRP6 Low-density lipoprotein receptor-related protein 6 1 S(0.013)Y(0.003)S(0.057)Y(0.071)RPY(0.023)S(0.826)Y(0.005)R;S(0.001)YS(0.014)Y(0.004)RPY(0.028)S(0.948)Y(0.005)R 58.04 0.0033428000000000004 9295200.0 2581.8 2588.1 2973.7 3652.1 2998.5 3108.8 2764.6000000000004 3608.4 3141.3 3403.7 4207.1 True False 2843.902435379296 2806.2082699377393 3175.513164310763 3877.681922479106 2787.8957042634315 3083.482963519357 2869.8083658471687 3536.4276312649604 3009.2820851650085 3188.7898011209236 3689.6533710042254 0.770777671888799 0.7605614912205056 0.8606535208066097 1.0509610341590718 0.7555982700631416 0.835710743928261 0.7777989088080877 0.9584715082063221 0.8156002156771605 0.8642518633811447 1.0 11.849269571564884 -10.939038147935745 0.694694009346986 1.0260810914673129 0.841834601740104 0.04451193322188418 0.09497245881528212 1.063180279466949 0.6897582144113432 0.12243553155869023 0.01665204451449564 1.1506993083802405e-11 10.939038147935745 -0.1842464897272088 SYT(ph)PSKIR ddPTM_A549_MK2206_60min_R1 2 SYTPSKIR 8 1 O60493-4;O60493;O60493-2 O60493-4 SNX3 Sorting nexin-3 1 S(0.006)YT(0.964)PS(0.029)KIR;S(0.018)YT(0.971)PS(0.011)KIR 62.466 0.0040982 12538400.0 4546.799999999999 5406.9 4691.7 4538.1 6258.4 4487.7 4104.4 3184.7 8224.7 8329.5 8288.3 True False 5314.188681412773 5682.088115262857 5357.053608564175 5649.934703723055 5337.797650452347 4962.585435305834 4850.116351785861 3636.140977734709 6361.818582147041 6447.860164911007 6230.08636455707 0.8529879636412692 0.9120400236485048 0.8598682739039424 0.9068790339513598 0.8567774727520714 0.7965516278454754 0.7784990557078227 0.5836421463465895 1.021144525112749 1.0349551816155955 1.0 12.60503644740648 SYT(ph)PSKIR ddPTM_A549_PD325901_60min_R1 2 SYTPSKIR 8 1 O60493-4;O60493;O60493-2 O60493-4 SNX3 Sorting nexin-3 1 S(0.013)YT(0.976)PS(0.011)KIR;S(0.002)YT(0.997)PS(0.001)KIR 62.303000000000004 0.0041287 10745700.0 4437.5 3546.7 4357.5 4734.9 4783.7 5608.9 4767.7 4851.200000000001 5063.8 4662.1 5405.4 True False 4887.991733285155 3845.592856144732 4653.226153776154 5027.364019261882 4447.709414869093 5563.222978024865 4949.137432485548 4754.439010307221 4850.986095838848 4367.734210361039 4740.570067653783 1.0310978771598105 0.8112089477137514 0.9815752298497601 1.0604977771692425 0.9382224819789167 1.1735345957618621 1.0439962624442318 1.0029255854159966 1.023291719478732 0.9213521049215778 1.0 12.210844842588374 -5.991299781251769 24.898167739645512 1.0220264336346285 0.9149630541885116 0.1925304267338388 0.07814885706371383 173.20081622357694 495653.93061049876 0.00893308504053168 0.027713832353692125 1.0202350011004452e-06 5.991299781251769 -0.10706337944611688 SYT(ph)TPK ddPTM_A549_MK2206_60min_R1 1 SYTTPK 6 0 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 S(0.065)YT(0.467)T(0.467)PK 98.904 0.035981 32816000.0 9185.0 10000.0 9148.3 8772.2 13711.0 12202.0 9880.7 11197.0 15682.0 13977.0 14154.0 True False 10735.203448310096 10508.957286546556 10445.666501956142 10921.389393799029 11694.130062851871 13493.207540967926 11675.895292147587 12784.209039374364 12130.052039008104 10819.585992551916 10639.17116947272 1.009026293242929 0.9877608997118319 0.9818120543006389 1.0265263355416336 1.0991579961046378 1.268257397689434 1.097444068354645 1.2016170090445073 1.1401312983677911 1.0169576013211317 1.0 13.377098143521364 -6.63569041647562 3.809616070598538 1.0978103059206195 0.9938691843620143 0.3582106093777917 0.07274478202966159 0.26608914497215025 7.2861498866049175 0.012426898890512537 0.026977200223462266 2.3137135155795886e-07 6.63569041647562 -0.10394112155860513 SYT(ph)TPKK ddPTM_A549_PD325901_60min_R1 1 SYTTPKK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 SYT(0.582)T(0.417)PKK 75.38 0.055879 6420900.0 2018.7 2158.4 1784.1 1862.9 2429.2 1945.6 1793.2 2145.5 2271.4 2174.3 2359.0 True False 2223.6369379116045 2340.295942905458 1905.1797546648397 1977.9671020471321 2258.581372285051 1929.7556786616246 1861.441207276691 2102.70631938781 2175.9409570062708 2037.0143269316413 2068.857954933081 1.0748137312228039 1.131201848500593 0.9208847567915625 0.956067137103722 1.0917044192906453 0.9327637376264646 0.89974335977885 1.0163608933972577 1.0517594752302137 0.9846081129323014 1.0 11.014618879715737 -5.739173439453796 24.999499015668484 1.00468137400941 1.1030078364115203 0.34007517315685054 0.05839505518738591 234.14903221716682 262891.02209675685 0.008332263366320345 0.03221972231632386 1.8231674583970171e-06 5.739173439453796 0.09832646240211029 SYTT(ph)PK ddPTM_A549_MK2206_60min_R1 1 SYTTPK 6 0 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 SYT(0.061)T(0.939)PK 110.31 0.025383000000000003 36554000.0 7828.3 8902.2 8329.4 7969.9 12697.0 10908.0 10215.0 10771.0 13841.0 12621.0 11445.0 True False 9149.525656440494 9355.283955629475 9510.634168249131 9922.52585778241 10829.288119614192 12062.277319855615 12070.933274898298 12297.822234804069 10706.03559953521 9769.90733433482 8602.890634069186 1.0635408545363254 1.0874581990593555 1.1055161076423659 1.1533943972840013 1.25879644182945 1.4021191054186553 1.4031252736254674 1.4294988461322764 1.2444695690001153 1.1356540202480327 1.0 13.070605782003794 -4.280804893959251 15.651112376698178 1.1757544923241066 1.154784661240737 0.0 0.14686467622715157 0.0 0.0 0.023295638337254804 0.0 5.238357160168158e-05 4.280804893959251 -0.020969831083369472 SYTT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 SYTTPKK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 S(0.091)Y(0.001)T(0.065)T(0.843)PKK 50.123000000000005 0.032698000000000005 170360000.0 5569.7 5390.8 6447.7 5963.4 7191.5 6215.1 6260.5 5439.7 6201.6 5906.1 6853.4 True False 6135.131843803569 5845.101635014249 6885.279695169827 6331.745674135955 6686.393849328158 6164.486286209837 6498.746753377047 5331.200916137905 5940.968318644929 5533.187838058669 6010.475247282061 1.0207398901738889 0.9724857676865746 1.1455466351489183 1.0534517510905934 1.1124567649374726 1.0256237705990754 1.0812367551660382 0.8869849216247376 0.9884357017078537 0.9205907370737078 1.0 12.553263353766553 -8.153296972271697 21.312517205397093 0.9861986901146881 1.05939307533854 0.41610043882982817 0.05663514539313714 8.288997930516675 1623.943875222951 0.008253360742628375 0.01065504346315962 7.025917206079086e-09 8.153296972271697 0.07319438522385202 SYVS(ph)EPELATLSGDMAQPSLGLVGPESR ddPTM_A549_PD325901_60min_R1 1 SYVSEPELATLSGDMAQPSLGLVGPESR 28 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 S(0.154)YVS(0.846)EPELATLSGDMAQPSLGLVGPESR 92.81700000000001 3.3886e-10 1591400.0 388.66 558.33 290.23 359.3 447.54 415.8 452.11 389.18 407.17 552.6 381.41 True False 428.1164770836305 605.3824285593054 309.9267530947684 381.49314497049454 416.10633432918326 412.4138626580509 469.31529345408507 381.41749959419616 390.0580608718162 517.7087416926938 334.4989879571967 1.2798737589556275 1.8098184160628061 0.9265401817431729 1.140491178464526 1.2439688887262919 1.232930076042037 1.4030395019136495 1.140265033157599 1.1660963856839204 1.54771392539741 1.0 8.385858035704713 -2.000000144102472 0.04612137925632737 0.442891076134738 2.654661417749921 0.0 0.2573067322529717 456.21858385716894 1.550374264900982 18.333351325024495 73.45542994102891 0.009999996681918508 2.000000144102472 2.211770341615183 SYVS(ph)PR ddPTM_A549_MK2206_60min_R1 1 SYVSPR 6 0 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 SYVS(1)PR 73.26 0.047133 54610000.0 3516.8 3506.3 3773.3 3373.7 5039.7 3006.2 3864.5 3528.9 4612.0 5136.3 5032.5 True False 4110.349862495038 3684.755693381819 4308.410678686874 4200.256651451147 4298.366806050219 3324.3140886459414 4566.629627101756 4029.1323818029987 3567.3893638506142 3976.0062626847275 3782.7913600658117 1.0865917443629585 0.9740837764094167 1.138950121375956 1.1103590580734732 1.1362949729205887 0.8787992178844636 1.2072116044545231 1.065121493175056 0.9430573944708782 1.051077335287018 1.0 11.885235491369448 -8.712380017745172 7.995482788175856 0.9731438747494296 1.074833270644707 0.11653729962058335 0.0869526927804122 0.25492405589803524 36.47474278226056 0.013501257976677844 0.015270458678997012 1.9391883002489206e-09 8.712380017745172 0.10168939589527737 SYVS(ph)PR ddPTM_A549_PD325901_60min_R1 1 SYVSPR 6 0 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 SYVS(1)PR 77.923 0.044334 78937000.0 6858.6 5538.1 6519.7 5695.1 5934.6 5957.6 5761.9 5201.3 5204.2 5597.1 5664.5 True False 7554.880022965542 6004.8151229636405 6962.166048141 6046.8733924894605 5517.774169258554 5909.083280835983 5981.172257532662 5097.555991159089 4985.485572092996 5243.6981507929395 4967.802410224007 1.5207690240290532 1.2087467711286997 1.4014579230873765 1.2172129431002865 1.1107072531513482 1.1894763102241686 1.203987550958767 1.0261189093728933 1.003559554186897 1.0555367781941416 1.0 12.278392077492036 -4.793361367647206 0.257382405059465 0.9712056168330742 1.9571901807228702 0.747628654439164 0.0794863044920449 3.6576743292202445 0.15050450057992884 0.03867450438954287 1.1897277110795053 1.6093060069647088e-05 4.793361367647206 0.985984563889796 SYVTTSTR ddPTM_A549_MK2206_60min_R1 2 SYVTTSTR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 0 ; 118.74 0.0034255 25015000.0 4926.6 5346.5 5121.8 4815.5 6753.0 4747.6 4077.3 3975.5 6490.9 7643.9 8222.6 False True 5758.089636194289 5618.6140132521205 5848.148255929403 5995.297716176008 5759.642645645007 5249.987880798179 4818.092632573943 4539.039299458138 5020.721513837371 5917.137681080886 6180.701487784827 0.9316239665633806 0.9090576570242742 0.9461949048157944 0.9700027946705985 0.9318752340697936 0.8494161853915683 0.7795381547056004 0.7343890185327389 0.8123222782656675 0.9573569752195875 1.0 12.593554872875096 -7.151775184233589 6.7612253260460164 0.8797565496041804 0.9390358486655819 0.2018510242140742 0.07330082328187426 0.556120203508287 30.326875215985357 0.014371071440196313 0.025011268313220855 7.050579530061834e-08 7.151775184233589 0.0592792990614015 SYVTTSTR ddPTM_A549_PD325901_60min_R1 2 SYVTTSTR 8 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 0 ; 164.72 0.00028019 42533000.0 9711.9 9403.1 8858.8 9927.9 11936.2 9755.3 9163.8 9588.8 11429.5 10637.900000000001 12111.4 False True 10697.844938477097 10195.532237182322 9460.01144029196 10541.123835103183 11097.842489654555 9675.856071159411 9512.533423623769 9397.54386173192 10949.157862156897 9966.221178524629 10621.774580490264 1.007161737185287 0.9598708916219282 0.8906243837699029 0.9924070366231252 1.0448199974078454 0.9109453413680717 0.8955691303312052 0.8847432969433401 1.0308219007272061 0.9382821206571513 1.0 13.374737196971786 -8.792752558303363 24.99873225372135 1.0145547977198541 0.9484220357701033 0.0547099548197133 0.05451951815707868 199.35675697752808 159154.64155062035 0.008986340995248582 0.009567147305710863 1.6115635709621016e-09 8.792752558303363 -0.06613276194975082 T(ph)ADKLKQYIEK ddPTM_A549_MK2206_60min_R1 1 TADKLKQYIEK 11 2 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 T(0.536)ADKLKQY(0.464)IEK 54.776 0.0063188 64974000.0 6706.1 9098.6 11053.0 9576.4 16155.0 9398.0 11613.0 10882.0 17438.0 13492.0 15732.0 True False 7837.925731596332 9561.67987673726 12620.481602715394 11922.618429900936 13778.620900399086 10392.490122112496 13722.93177889319 12424.556824727324 13488.320842763882 10444.14782939904 11825.310218888295 0.6628093121038799 0.8085775087290826 1.06724317325367 1.0082288083112791 1.1651805022747574 0.8788344601322012 1.1604711863688673 1.0506749163232831 1.1406314585489097 0.8832028620033024 1.0 13.529590410503657 -5.608450271234524 2.58772131512599 1.064197742243852 0.6678408215892667 0.6035408463018237 0.09603235810613776 0.11340137456903633 1.3923712234113037 0.010985603349943892 0.06983506012481225 2.4634839026059014e-06 5.608450271234524 -0.3963569206545853 T(ph)AKDSDDDDDVAVTVDRDR ddPTM_A549_MK2206_60min_R1 1 TAKDSDDDDDVAVTVDRDR 19 2 A0A0C4DFZ1;A8MZ54;Q16623-3;Q16623-2;Q16623 A0A0C4DFZ1 STX1A Syntaxin-1A 1 T(0.508)AKDS(0.492)DDDDDVAVTVDRDR 130.07 6.0483e-17 78919000.0 1303.4 1184.8 1036.9 1112.7 1324.6 960.72 1126.7 1095.6 1778.1 1265.7 1566.1 True False 1523.3820549294924 1245.1012593100365 1183.9480117484482 1385.3115499510006 1129.7530946870097 1062.3827527256767 1331.4068057589734 1250.9046551342817 1375.3631890422325 979.7774909331735 1177.1941478388596 1.294078854984268 1.0576855666466263 1.0057372557636202 1.1767910607559606 0.9596998904225407 0.9024702974237866 1.1310001907529217 1.0626154211102246 1.1683401515095702 0.8322989820599163 1.0 10.201136560030571 -5.260287508754852 23.872979542678426 1.0649443081026675 1.2940789811970936 0.28705812732336133 0.10742573270067778 44.787997460236184 928012.5221158074 0.012234098476275974 0.10352947561234187 5.4917719084489646e-06 5.260287508754852 0.22913467309442614 T(ph)AMSTPHVAEPAENEQDEQDENGAEASADLR ddPTM_A549_PD325901_60min_R1 2 TAMSTPHVAEPAENEQDEQDENGAEASADLR 31 0 P26038 P26038 MSN Moesin 1 T(0.344)AMS(0.328)T(0.328)PHVAEPAENEQDEQDENGAEASADLR;T(0.348)AMS(0.348)T(0.304)PHVAEPAENEQDEQDENGAEASADLR 92.822 8.888099999999998e-10 9710800.0 485.75 291.87 314.11 245.66 1049.47 270.99 397.01 422.18000000000006 624.4 486.92999999999995 517.78 True False 535.06298240975 316.46690921785415 335.4273934968742 260.8338602656602 975.7588476749526 268.7831472864482 412.11843280220813 413.7592887061973 598.1586394094902 456.1851567000062 454.0963424778511 1.1783027792958893 0.6969157855159118 0.7386701061421451 0.5744020285263199 2.1487925719695613 0.5919077564461076 0.9075572609843461 0.9111707142331337 1.3172505115225979 1.0045999362398672 1.0 8.826854606386528 T(ph)APSPLVEAKDPK ddPTM_A549_MK2206_60min_R1 1 TAPSPLVEAKDPK 13 1 Q8TEH3;A0A0A0MS48;Q8TEH3-5;Q8TEH3-2;Q8TEH3-4;Q8TEH3-3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 T(0.565)APS(0.435)PLVEAKDPK 72.819 0.00059825 7233300.0 2750.8 3256.8 3491.3 2233.4 4055.8 2914.3 2803.1 2635.4 4828.6 5191.4 6023.1 True False 3215.0677893969955 3422.557209082482 3986.4188382846514 2780.5831002611367 3459.197192685773 3222.6892916442243 3312.3869860858927 3008.9760205740095 3734.929809689742 4018.6591344161147 4527.398040896648 0.7101358794510265 0.7559656072132431 0.8805099092844825 0.6141680221495268 0.7640585522718214 0.7118192972062984 0.7316314925625308 0.664614861205816 0.8249616614116044 0.8876310627241032 1.0 12.144466436042036 -9.744077712328838 0.7698039835045236 0.9821608269774907 0.7318662808868807 0.5408435552944391 0.07238217251021821 0.23396833804556078 0.2918677189954623 0.026654624803287893 0.014455059347833771 1.8026951390813384e-10 9.744077712328838 -0.2502945460906101 T(ph)APSTLR ddPTM_A549_PD325901_60min_R1 1 TAPSTLR 7 0 A0A1B0GTX1 A0A1B0GTX1 1 T(0.999)APST(0.001)LR 82.75 0.015706 9543800.0 3025.1 3408.6 3067.3 3176.1 3593.1 3876.0 3207.9 3279.2 3519.6 3779.9 3850.4 True False 3332.205925039082 3695.85468448274 3275.465423173288 3372.2804835535426 3340.733051522074 3844.4351410837025 3329.978389930234 3213.793783517364 3371.6834517386965 3541.2364689182286 3376.8252096966226 0.986786617048044 1.0944761588103578 0.969983703559107 0.9986541423198246 0.9893118074128003 1.138476202453218 0.9861269633880169 0.951720501934447 0.9984773396197228 1.0486881165034825 1.0 11.721451789553784 T(ph)AS(ph)PPPPPK ddPTM_A549_PD325901_60min_R1 1 TASPPPPPK 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)AS(1)PPPPPK 79.693 0.0026438000000000004 21335000.0 5869.7 6704.7 5942.7 5998.2 7065.1 6964.1 6497.1 6701.9 6943.7 7478.1 7892.2 True False 6465.587622955246 7269.728599146692 6346.007358358129 6368.695191099417 6568.871749271831 6907.386678539995 6744.350695849541 6568.22534696116 6651.880436367195 7005.931489779467 6921.509432777817 0.934129713431656 1.0503097149185165 0.9168530968556781 0.9201309704122531 0.9490519102905475 0.9979595846289046 0.9744046094787772 0.94895851992289 0.9610447693484669 1.0121970587227487 1.0 12.756870977685407 -10.671903009772297 0.700091166491723 1.0031867125533283 0.9619120379874172 0.17936698453690036 0.036121173718994384 1.4552784137590997 1.118854509301746 0.03530628551582678 0.007037730159810991 2.128614372631834e-11 10.671903009772297 -0.04127467456591105 T(ph)AS(ph)PPPPPKR ddPTM_A549_MK2206_60min_R1 2 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR 77.593 0.00058274 48661000.0 6526.9 7233.0 6378.4 5889.4 8960.900000000001 6690.6 5734.6 6106.700000000001 10576.8 10519.8 10086.2 True False 7628.481152615692 7601.12880535913 7282.953031281991 7332.303264385216 7642.763480432451 7398.594851139156 6776.502590135272 6972.34342598441 8181.171687678919 8143.369873681598 7581.51817504139 1.0061944028214436 1.0025866363259932 0.9606193460378046 0.967128627155891 1.0080782376269548 0.9758724677988079 0.8938186829708783 0.9196500311689018 1.0790941205696252 1.0741080725084644 1.0 12.888271057107543 -8.764212855999789 24.999994769878736 1.037349999994464 0.9669983105509122 0.472397230889822 0.038958909510016675 60.14029647888736 542101.5489455059 0.007720490176148128 0.008399592260029629 1.7210248611692461e-09 8.764212855999789 -0.07035168944355175 T(ph)AS(ph)PPPPPKR ddPTM_A549_PD325901_60min_R1 2 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR 71.176 0.0011535999999999999 68764000.0 12903.4 13115.8 14906.8 12955.4 16571.9 14924.400000000001 12271.7 14769.0 14236.599999999999 15855.400000000001 16632.5 True False 14213.343669018981 14221.114495904105 15918.465089870435 13755.625634151816 15407.94691395136 14802.860634569051 12738.706258831904 14474.42070894364 13638.285211110095 14854.287338100508 14586.807942104486 0.9743971213875032 0.9749298511605945 1.0912918818874795 0.9430182181563191 1.056293259985735 1.0148115127944433 0.8733032140679607 0.9922952825863675 0.9349739343412823 1.018337075325709 1.0 13.832376589745774 T(ph)ASAPAK ddPTM_A549_MK2206_60min_R1 1 TASAPAK 7 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 T(0.647)AS(0.353)APAK 72.23 0.021108000000000002 7395300.0 3787.5 2861.4 2421.8 2150.7 2616.8 2875.8 2342.8 2333.3 3182.2 5401.3 5142.4 True False 4426.737404515457 3007.0330379724332 2765.2476563336777 2677.6215965485912 2231.872186454 3180.115247198456 2768.4564343056013 2664.0524204315607 2461.43678092919 4181.142578634234 3865.4001569801117 1.1452209925851238 0.7779357675407435 0.7153845770250238 0.6927152397697717 0.5773974480814622 0.8227130744680669 0.7162147053019446 0.6892048202618386 0.6367870546298667 1.0816842781681884 1.0 11.916402058348476 -10.92112371577104 1.177603682625593 0.9999283052009709 0.7354996526061439 0.3595354343484424 0.14344558402075297 0.45671861954028514 1.1257325282824329 0.09751943521656335 0.02307653913560503 1.1991576551370113e-11 10.92112371577104 -0.26442865259482695 T(ph)ASEGDGGAAAGAAAAGAR ddPTM_A549_PD325901_60min_R1 2 TASEGDGGAAAGAAAAGAR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.5)AS(0.5)EGDGGAAAGAAAAGAR;T(0.533)AS(0.467)EGDGGAAAGAAAAGAR 51.526 0.012833 19051400.0 2189.2 1328.8899999999999 1602.17 1559.61 1042.81 961.44 883.63 1165.6 925.3399999999999 1545.31 3175.4 True False 2411.4459723961395 1440.8802240398609 1710.902890830877 1655.9435675686973 969.5666230991994 953.6103514044166 917.2570231908892 1142.3511936044897 886.4511777565303 1447.738862875746 2784.845930519078 0.8659171934681 0.5174003373936344 0.6143617756663383 0.5946266360451903 0.34815808389029196 0.3424284054474315 0.32937442360408 0.4102026546910487 0.3183124667838631 0.5198631805838884 1.0 11.443381798430421 -10.843851847476987 1.0735248830591662 1.0020254931228876 0.46616415683078294 0.06042008774277974 0.20930303855352161 0.29404730899566883 0.5978589024627087 0.11870862698322426 0.028626624210419758 1.432676550303967e-11 10.843851847476987 -0.5358613362921046 T(ph)ASEINFDKLQFEPPLRK ddPTM_A549_PD325901_60min_R1 1 TASEINFDKLQFEPPLRK 18 2 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.537)AS(0.463)EINFDKLQFEPPLRK 78.975 0.00011716 72564000.0 3059.8 3231.6 3054.5 3496.7 3622.5 3363.7 3743.0 3704.5 3483.6 3512.8 4070.0 True False 3370.428643494295 3503.938273301185 3261.7967382006364 3712.683217418117 3368.0680969465675 3336.307142431181 3885.441913248193 3630.6108413759716 3337.1964065453226 3291.0012085018034 3569.415801855718 0.9442521775529847 0.9816559537500529 0.9138180921664681 1.0401374968665502 0.9435908518126492 0.9346927698075004 1.088537208589757 1.0171442731576519 0.9349419041654754 0.9219999549480425 1.0 11.801472255629884 T(ph)ASFSESR ddPTM_A549_PD325901_60min_R1 1 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.323)AS(0.323)FS(0.323)ES(0.03)R 128.58 0.0011293 3557000000.0 13243.0 12607.0 12910.0 11952.0 13812.0 12566.0 11384.0 13063.0 13332.0 13907.0 14340.0 True False 14587.419611018662 13669.436134270352 13786.15023413658 12690.247895038558 12841.892768813244 12463.666662244026 11817.224349563827 12802.448217274743 12771.702403278863 13028.909646616525 12576.270908749635 1.1599161402343694 1.0869228433016798 1.0962033447088995 1.009062860295863 1.0211208761317958 0.9910462928699105 0.9396445445002525 1.0179844494577284 1.0155397013905976 1.0359914907329149 1.0 13.618416580065542 -5.898789432054342 1.1181200524583819 1.001809827259929 1.1561999693598648 0.7777107791364802 0.02690374885921703 0.23419212213057236 0.4292595728756825 0.0037585501627135313 0.03241882075685702 1.2624394807832364e-06 5.898789432054342 0.15439014209993585 T(ph)ASGSS(ph)VTSLDGTR ddPTM_A549_MK2206_60min_R1 1 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 2 T(0.654)AS(0.322)GS(0.06)S(0.664)VT(0.242)S(0.058)LDGTR 123.24 2.0205e-06 5430400.0 1230.4 1085.7 1286.5 939.51 2443.4 1535.2 1178.1 1544.5 2169.7 1871.7 2358.5 True False 1438.0614396081382 1140.9574926003597 1468.9450449555197 1169.689992176206 2083.979096752408 1697.653845016715 1392.1455204265972 1763.4376048328738 1678.2664142989327 1448.881670047895 1772.8193587114188 0.8111720083276839 0.6435836155521618 0.8285926243626021 0.6597908503359305 1.1755168886846752 0.9576011434411805 0.7852720659810958 0.9947080034790662 0.9466652121391474 0.8172754110159429 1.0 10.791829825090343 -6.740292654848105 24.9999349781554 0.9714778975341938 0.7358280753961092 0.4761060105678244 0.10905259050852185 129.3166143128292 152879.00171479362 0.013247779197597691 0.027555940515441732 1.8184750431552795e-07 6.740292654848105 -0.2356498221380846 T(ph)ASGSSVTSLDGTR ddPTM_A549_MK2206_60min_R1 2 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 1 T(0.889)AS(0.088)GS(0.014)S(0.007)VT(0.001)SLDGTR;T(0.961)AS(0.038)GSSVTSLDGTR 71.529 0.0019545 7564200.0 5209.1 6303.799999999999 5144.4 7033.0 6760.5 5382.8 5038.8 6178.5 8160.299999999999 7419.0 7187.5 True False 6088.268729732402 6624.63649429322 5873.953275763059 8756.085315723363 5766.0394055802 5952.404323186541 5954.284736716354 7054.321295862681 6312.005079321377 5743.0427472807205 5402.645385091509 1.1269051169882178 1.2261838455238558 1.0872365030605404 1.6207033206150463 1.0672622381419794 1.1017573612386409 1.1021054154594494 1.305716143304341 1.1683174869739235 1.063005682943495 1.0 12.399450275167208 -10.57301905257777 0.41987570984202593 0.947685717646825 1.2161796394274693 0.1517817719281308 0.15046199484970332 2.341814463198372 0.5725278819072114 0.27043652360749487 0.043972891468219116 2.6728891459590483e-11 10.57301905257777 0.26849392178064435 T(ph)ASNPKVENEDEPVR ddPTM_A549_PD325901_60min_R1 1 TASNPKVENEDEPVR 15 1 Q9UBF8-2 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 T(0.563)AS(0.437)NPKVENEDEPVR 173.09 9.9457e-28 318690000.0 17750.0 16813.0 17678.0 17290.0 22562.0 19740.0 18958.0 19572.0 19852.0 21054.0 20838.0 True False 19551.96693314062 18229.890515228642 18877.735386449778 18357.96403156095 20977.322954674517 19579.24398477613 19679.457064215654 19181.621106063038 19017.689477189615 19724.64684690189 18275.05810296548 1.0698716700642357 0.9975284572293914 1.0329781322767178 1.0045365616967323 1.1478662796300791 1.0713642536435506 1.0768478520471727 1.0496065729580608 1.0406363345079395 1.0793206093118353 1.0 14.157588372579523 -9.882404426035656 0.8108150706588914 1.0041512452089978 1.0553717339085282 0.0 0.04432198256001728 0.6590100992178062 0.892737104362393 0.01622344173518681 0.008191235241452424 1.3109785139752677e-10 9.882404426035656 0.05122048869953044 T(ph)ASPEDSDMPDHDLEPPR ddPTM_A549_MK2206_60min_R1 1 TASPEDSDMPDHDLEPPR 18 0 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 T(0.499)AS(0.499)PEDS(0.002)DMPDHDLEPPR 80.156 0.00025739 2595400.0 346.08 245.55 317.37 179.39 400.45 440.23 295.48 302.61 407.78 351.76 428.41 True False 404.4898431563588 258.04744617115074 362.3778382569246 223.34055805312315 341.5443354729073 486.8148463989766 349.1648912449291 345.5058942042578 315.418481090851 272.2971716920698 322.023973485503 1.25608611923599 0.8013299239125363 1.1253132316039762 0.6935525813054958 1.0606177290967533 1.5117347976606228 1.0842822895005608 1.0729197906124586 0.9794875756511048 0.845580435347085 1.0 8.331024285385427 -5.196799186153611 21.291114428838938 1.0191945294658786 1.2560988520181648 0.10345044048504459 0.20187538882774184 28494.171805845297 9382847.418982118 0.02581877738436699 86.37786292459609 6.356247710661252e-06 5.196799186153611 0.23690432255228622 T(ph)ASPEDSDMPDHDLEPPR ddPTM_A549_PD325901_60min_R1 1 TASPEDSDMPDHDLEPPR 18 0 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 T(0.529)AS(0.455)PEDS(0.016)DMPDHDLEPPR 96.79 1.8262e-06 2619700.0 540.12 465.67 315.24 527.31 527.6 623.64 552.34 461.03 395.47 352.97 455.92 True False 594.9525847846717 504.9136451690071 336.63408209211593 559.8807410921 490.54319612118945 618.5612826071829 573.3596009520454 451.8343949789617 378.8497711839704 330.68341396176294 399.84473031500244 1.487959049293862 1.262774289337839 0.8419120137632216 1.4002453918825424 1.2268342157085168 1.5470037134661572 1.4339556269763662 1.1300246338697555 0.9474922200062711 0.8270295664550752 1.0 8.643296064043142 -8.527018481556082 4.2962629363930125 0.976396359884484 1.3029618219516905 0.4617850146124256 0.18213629796155134 0.1518641744170729 6.805345462437461 0.030314788576756468 0.035381488778935696 2.9715395741242727e-09 8.527018481556082 0.3265654620672065 T(ph)ASPLPLRPDAPVEK ddPTM_A549_PD325901_60min_R1 1 TASPLPLRPDAPVEK 15 1 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.592)AS(0.408)PLPLRPDAPVEK 74.257 0.001231 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)ASPLPLRPDAPVEKSPEETATQVPSLESLTLK ddPTM_A549_MK2206_60min_R1 1 TASPLPLRPDAPVEKSPEETATQVPSLESLTLK 33 2 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.5)AS(0.5)PLPLRPDAPVEKSPEETATQVPSLESLTLK 75.893 6.0021000000000005e-06 9571600.0 480.24 768.11 770.99 694.37 848.46 808.71 639.16 568.17 1365.3 970.06 1396.1 True False 561.2927712592746 807.2035181369281 880.3279752897441 864.4906811714542 723.6526579481658 894.2871554217484 755.2870985789523 648.7098374476493 1056.0617299360897 750.9227722640704 1049.4098396001739 0.534865169048851 0.7691975886603782 0.8388790938201512 0.8237874742062891 0.6895805915293096 0.8521810275406533 0.7197255734391793 0.6181663378483361 1.0063386963652354 0.7155667346802967 1.0 10.035362506986077 -8.778624769102295 24.91379257102581 1.0029933174743926 0.7410833377826711 0.18654933251639771 0.12537743944216964 100.627912650867 145880.4956966726 0.015250595146244512 0.016255003879754412 1.664850461728245e-09 8.778624769102295 -0.2619099796917215 T(ph)ASPPPPPKR ddPTM_A549_PD325901_60min_R1 1 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.913)AS(0.087)PPPPPKR 119.45 3.6143e-05 61478000.0 7552.4 7222.0 6903.0 7838.3 8971.8 7760.1 7112.0 7519.3 7227.3 7829.1 8558.0 True False 8319.11408821697 7830.623285611206 7371.47909111114 8322.453988929114 8341.65171902974 7696.904318452957 7382.651051835725 7369.321662723267 6923.561714612758 7334.769289877434 7505.420253631754 1.1084141603118736 1.0433290903093788 0.9821540755887984 1.1088591588061987 1.111417007594391 1.0255127705511955 0.9836425945986672 0.9818666262102204 0.9224748888994665 0.9772629702285165 1.0 12.873717140099764 -7.688360165185075 2.61170278191518 0.9645691987903373 1.0666071405612392 0.5793607639331859 0.0393703250228133 0.16589791692450293 2.31160257240462 0.007095130140690002 0.010796873916611984 2.049461832651585e-08 7.688360165185075 0.10203794177090186 T(ph)ASRPDDIPDSPSSPK ddPTM_A549_MK2206_60min_R1 1 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 T(0.5)AS(0.5)RPDDIPDSPSSPK 123.19 2.3459e-08 8122500.0 1851.9 2108.1 1886.0 2468.9 3010.5 2045.6 1772.7 2280.8 3285.4 2868.0 3337.2 True False 2164.455445391993 2215.3932855768808 2153.4631595694586 3073.7806108331342 2567.6594379852345 2262.064034240615 2094.7766437995324 2604.1103846570545 2541.262145705728 2220.1168080874922 2508.481137965549 0.862854981300529 0.8831612293380166 0.8584729328744245 1.2253552814537245 1.023591287621832 0.9017664115566022 0.8350776938663598 1.0381223702439573 1.0130680702533668 0.8850442502781072 1.0 11.292598374741226 T(ph)ASRPDDIPDSPSSPK ddPTM_A549_PD325901_60min_R1 1 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 T(0.5)AS(0.5)RPDDIPDSPSSPK 92.31 3.4691000000000004e-06 7042400.0 2685.2 2744.9 3066.2 2850.3 2947.1 2570.7 2878.4 2964.8 3535.2 3122.4 3257.7 True False 2957.7995272602384 2976.222356227387 3274.2907705584507 3026.35655749903 2740.1058629430577 2549.7650715128675 2987.9390871209157 2905.6647381593957 3386.6278379891564 2925.251131127881 2857.023552261764 1.0352730641365189 1.0417213235331082 1.146049624955439 1.0592690267125076 0.9590770999328485 0.8924550410143959 1.045822350591234 1.0170251259773917 1.1853692404139025 1.0238806497804698 1.0 11.480297214037945 T(ph)ASVNQR ddPTM_A549_PD325901_60min_R1 1 TASVNQR 7 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 T(0.568)AS(0.432)VNQR 48.794 0.059538 24949000.0 722.15 701.2 792.39 567.5 597.63 606.84 593.81 883.39 517.81 684.88 993.98 True False 795.4621363812676 760.2925848616137 846.1663504281552 602.5531861139877 555.6545305115743 601.898096237161 616.4077644953002 865.7700934439514 496.04824643278045 641.6365599176478 871.7267613583656 0.9125131539402795 0.8721684575530182 0.9706784143114053 0.6912179513395471 0.6374182314257822 0.6904664660050761 0.7071112094055535 0.9931668176561056 0.5690409752475819 0.7360523828794926 1.0 9.767732189677291 -6.2544001296851714 24.814836333786857 0.7755186125052836 0.9138248528896399 0.23102540774995506 0.12968994692064162 880.4752109745849 3103849.0215357034 0.023865057576988594 0.06169189339455833 5.566726319222725e-07 6.2544001296851714 0.13830624038435624 T(ph)ATSPKETVEEGVEHDPGMPASK ddPTM_A549_MK2206_60min_R1 2 TATSPKETVEEGVEHDPGMPASK 23 1 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 T(0.349)AT(0.349)S(0.302)PKET(0.001)VEEGVEHDPGMPASK;T(0.352)AT(0.318)S(0.318)PKET(0.011)VEEGVEHDPGMPASK 101.3 2.671e-10 13111900.0 3670.4 4165.6 3483.2 4251.4 5173.2 3546.8 3563.2 4709.5 5850.700000000001 5644.3 6724.4 True False 4289.873787335587 4377.611247283836 3977.1701364858623 5292.9931908526 4412.229132896601 3922.120021824705 4210.58731719213 5377.0860472388595 4525.525791648049 4369.248709863403 5054.545896001297 0.8487159629373136 0.8660740919865837 0.7868501381364926 1.0471748204007685 0.8729229536499334 0.7759589293525923 0.8330297921566345 1.0638118948514699 0.8953377582797771 0.8644196332889094 1.0 12.303365769863586 -14.99999999956772 0.11609225881658013 1.3837118450999246 0.822535170193873 0.008377276428421565 0.09340531468967386 98.76734101097323 0.803937861832418 8.930474095002037 0.36255685608082605 1.0000000009953615e-15 14.99999999956772 -0.5611766749060516 T(ph)ATSPKETVEEGVEHDPGMPASK ddPTM_A549_PD325901_60min_R1 2 TATSPKETVEEGVEHDPGMPASK 23 1 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 T(0.402)AT(0.329)S(0.269)PKETVEEGVEHDPGMPASK;T(0.357)AT(0.318)S(0.318)PKET(0.008)VEEGVEHDPGMPASK 128.03 3.8837e-22 19169600.0 5900.2 5424.9 5377.799999999999 6617.299999999999 7265.0 6985.5 6026.299999999999 7577.799999999999 7669.6 6296.1 8251.5 True False 6499.183960502331 5882.075361688203 5742.769847338477 7026.035592021302 6754.731462889388 6928.612404035147 6255.634144217893 7426.654834330897 7347.2733837524465 5898.563171500852 7236.617810568176 0.8980968914803107 0.8128210602884357 0.7935709744062869 0.9709004642694624 0.9334100044671348 0.9574379337702171 0.8644416919575774 1.026260475368092 1.015291062217307 0.8150994464412281 1.0 12.82109986484276 -6.977148498592065 0.5216172885402254 1.0096868635838896 0.8229448063423773 0.07267397995405489 0.07838831456441864 0.6080345278283166 0.27676214542589156 0.011906879984367714 0.05114084142197266 1.0540264308309308e-07 6.977148498592065 -0.18674205724151227 T(ph)CFSPNRVIGLSSDLQQVGGASAR ddPTM_A549_MK2206_60min_R1 1 TCFSPNRVIGLSSDLQQVGGASAR 24 1 O00303 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F 1 T(0.513)CFS(0.486)PNRVIGLS(0.001)SDLQQVGGASAR 43.31 0.021454 1732900.0 1308.8 1360.1 1249.0 975.11 1616.5 1566.3 1161.3 829.86 1903.7 1490.1 1773.6 True False 1529.6934429121661 1429.3232805431983 1426.1269810722454 1214.0119937743511 1378.7149913646015 1732.0448263742073 1372.2931778893196 947.4951963396628 1472.514989584219 1153.4853750806044 1333.166171130198 1.1474139353651323 1.0721268747252133 1.0697293495403046 0.9106231616612103 1.0341658986109654 1.2991965021928646 1.0293489345937659 0.7107105002045012 1.1045247182771576 0.8652225056856427 1.0 10.38064089954069 -7.972797512280892 24.998192369284457 1.0179436178828851 1.083956529889195 0.1255914219616795 0.13775973550126633 587.6350529688175 540015.9611748985 0.021261570030635 0.02937665311979995 1.0646392854845598e-08 7.972797512280892 0.06601291200630999 T(ph)CS(ph)S(ph)LKPRELCFPET(ph)R ddPTM_A549_MK2206_60min_R1 1 TCSSLKPRELCFPETR 16 2 A0A1W2PSA1 A0A1W2PSA1 4 T(1)CS(1)S(1)LKPRELCFPET(1)R 41.136 0.020564 50984000.0 501.48 673.89 471.91 820.56 655.97 572.15 391.82 563.16 1080.6 817.0 695.45 True False 586.1175639911318 708.188122583086 538.8339340574884 1021.5972368363379 559.4776819582048 632.6945332375675 463.0086221997699 642.9896546051675 835.8458253636111 632.439132568857 522.7505715564366 1.1212184087069028 1.3547342865155134 1.0307668004133694 1.9542728261293643 1.0702574275383707 1.2103182046339689 0.8857161472271734 1.2300123416235227 1.5989381376953165 1.2098296338267671 1.0 9.029978923980657 T(ph)DEAMPGR ddPTM_A549_MK2206_60min_R1 1 TDEAMPGR 8 0 Q9NQS5 Q9NQS5 GPR84 G-protein coupled receptor 84 1 T(1)DEAMPGR 42.287 0.038083 9117700.0 1531.1 2013.4 1980.0 1882.6 2873.7 2150.0 2209.1 2442.5 2792.6 2784.7 2454.0 True False 1789.5122481989742 2115.873460073285 2260.7937730368662 2343.8370845131253 2450.9825367673716 2377.5115729455056 2610.464874946433 2788.731854842537 2160.0805588658354 2155.6343359418565 1844.6040730455043 0.9701335231491864 1.147061036561578 1.2256254911679874 1.2706450770453794 1.3287309578150914 1.2889007498612712 1.4151898031085157 1.5118322113635179 1.1710266666057334 1.1686162724247002 1.0 10.84909547322365 -9.583330078489144 1.3807192952142067 1.0405181713898952 1.268987428027447 0.17475463610089237 0.1404862849027398 0.3237002618731929 1.2578353403301352 0.03633821861209343 0.02752572757058552 2.610176777724506e-10 9.583330078489144 0.2284692566375517 T(ph)DEAMPGR ddPTM_A549_PD325901_60min_R1 2 TDEAMPGR 8 0 Q9NQS5 Q9NQS5 GPR84 G-protein coupled receptor 84 1 T(1)DEAMPGR;T(1)DEAMPGR 45.972 0.02096 35502000.0 8084.299999999999 8320.4 9574.0 9653.5 10321.099999999999 11285.8 10118.4 11003.2 11096.5 10375.0 11861.0 True False 8905.012184652893 9021.589308446339 10223.749213138937 10249.774770310794 9596.18154186203 11193.892186595065 10503.461249000933 10783.732544156583 10630.152694118204 9719.920729391428 10402.172193073871 0.8560723682869007 0.8672793663666928 0.9828475267835179 0.9853494616379693 0.9225170823697287 1.0761110255460247 1.0097372985225628 1.036680833964349 1.0219166244139017 0.934412596617396 1.0 13.344597204545595 -5.538002646101648 0.7997816817465965 1.0141427169871968 0.7817553211109104 0.5828592543565756 0.04279099382202156 0.6771212287970159 0.3954948519453344 0.0053435794218071615 0.12737765708696344 2.8973259346050797e-06 5.538002646101648 -0.23238739587628643 T(ph)DGSIS(ph)GDRQPVTVADYISR ddPTM_A549_MK2206_60min_R1 1 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 2 T(0.805)DGS(0.198)IS(0.996)GDRQPVT(0.001)VADYISR 102.21 8.917400000000001e-10 12773000.0 3397.9 3633.2 2778.3 2409.0 4487.4 3044.1 3168.0 3504.0 5175.1 3968.8 4287.9 True False 3971.3824493209468 3818.114361348094 3172.3047169840042 2999.205108144118 3827.309404422837 3366.2246414899587 3743.584592743791 4000.702730549948 4002.9481129365413 3072.2453235486923 3223.096089980363 1.2321638382630853 1.184610776333186 0.9842414338330607 0.9305354306586593 1.1874636366941684 1.044407162403423 1.1614871192892666 1.241260768795237 1.241957422672102 0.9531969379068094 1.0 11.654231484685877 -7.775290640121009 24.943904399704458 1.1319258608215488 1.0898689966040502 0.006149824999793441 0.11741267147002887 896.0143977895099 1613574.593708833 0.020023459767728746 0.027745937916823386 1.677680898687906e-08 7.775290640121009 -0.042056864217498546 T(ph)DGSISGDRQPVTVADYISR ddPTM_A549_MK2206_60min_R1 1 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.556)DGS(0.441)IS(0.003)GDRQPVTVADYISR 104.88 4.9338000000000005e-09 16660000.0 885.74 855.46 794.05 632.66 1091.6 722.36 697.0 753.57 1598.9 1223.2 1409.6 True False 1035.2312577361113 898.9992600349121 906.6582300403658 787.6617284011863 931.0270860337756 798.7996557362395 823.635877885865 860.390855211337 1236.7517029186354 946.8782704507056 1059.5574170191285 0.9770412071188607 0.8484667707429038 0.8556952322518616 0.7433874896719886 0.8786943218736087 0.7538993573217737 0.7773395425828025 0.8120285332265331 1.1672342461610157 0.8936545157831794 1.0 10.049246053593796 -8.750986198594516 24.99726709060334 1.0789717274195023 0.8265713055210473 0.4301643695977406 0.09039858638371254 89.71613155066522 214542.98650530356 0.014083849607260774 0.015885690312123772 1.7742458635948272e-09 8.750986198594516 -0.252400421898455 T(ph)DSIGEK ddPTM_A549_MK2206_60min_R1 1 TDSIGEK 7 0 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;Q7Z3U7-3 A0A286YFF8 MON2 Protein MON2 homolog 1 T(0.665)DS(0.335)IGEK 85.73100000000001 0.014275999999999999 159540000.0 2189.5 3230.3 2698.1 2639.4 2400.0 1391.7 1924.9 2092.0 2303.0 4679.6 4732.6 True False 2559.0340718644484 3394.7084722731356 3080.7311510256404 3286.05311848717 2046.963179260776 1538.9687702643073 2274.629413690822 2388.5474064813047 1781.3741771352918 3622.475109876653 3557.3648068847397 0.7193622838208289 0.9542761725486215 0.8660149628352293 0.9237323965558756 0.5754155928284863 0.4326148297430353 0.6394141554694143 0.6714372959047197 0.5007566763149263 1.0183029592202357 1.0 11.796593214669482 -2.845969697446559 18.152002120204244 0.7415195389497137 0.8137645518389863 0.0 0.19867621032934268 0.0 0.0 0.029530533464954187 0.0 0.001425707067713036 2.845969697446559 0.07224501288927265 T(ph)DSKTHYK ddPTM_A549_MK2206_60min_R1 1 TDSKTHYK 8 1 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 T(0.475)DS(0.432)KT(0.09)HY(0.002)K 42.743 0.04283 3635500.0 1123.6 1159.4 877.12 654.93 1436.3 1355.7 1144.5 1158.6 1724.9 1682.9 1697.2 True False 1313.2362106174437 1218.408507802209 1001.5088051545944 815.3878794009253 1225.0221726551044 1499.1592741591714 1352.4408353520412 1322.8350980636887 1334.21290409929 1302.7317211751888 1275.7383996629294 1.029393025219294 0.9550614045357043 0.7850424549572304 0.6391497501496889 0.9602455903018793 1.1751306338002159 1.0601239530842512 1.0369172068609074 1.045835811206914 1.021158978611439 1.0 10.31711680796412 -6.993478823723782 24.991840636902044 1.037479552580106 0.8478399323662551 0.46456455737091884 0.10142390576368648 125.33978452821651 480348.53296355164 0.015032084239666966 0.028360177347344247 1.0151288632299561e-07 6.993478823723782 -0.18963962021385083 T(ph)DSKTHYK ddPTM_A549_PD325901_60min_R1 1 TDSKTHYK 8 1 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 T(0.575)DS(0.35)KT(0.075)HYK 42.743 0.04283 4658200.0 1588.7 2282.8 2239.3 1918.9 2201.2 1839.5 1566.8 1484.2 1877.2 2162.8 2805.3 True False 1749.9836544608745 2475.1795674872956 2391.2723640048075 2037.4260948619037 2046.5953057277513 1824.5197218842818 1626.4254313858569 1454.5964666676236 1798.3078121388457 2026.240438894243 2460.2658842618794 0.7112985899838621 1.0060618176762186 0.9719568845390176 0.828132482710569 0.831859401384076 0.7415945299065382 0.661077098125844 0.5912354741707223 0.7309404335695887 0.8235859594915892 1.0 11.264598522656593 -4.981471125883378 17.342059232249234 0.8393319120781498 0.44300576584965207 0.03219363026161748 0.13012567690434948 20256691.4917964 423898497.21635145 0.02142326382721589 212171782.5009309 1.0435875134533605e-05 4.981471125883378 -0.39632614622849777 T(ph)DSPWIKPAR ddPTM_A549_MK2206_60min_R1 1 TDSPWIKPAR 10 1 A0A0D9SER9;A0A1W2PPZ7;A0A0D9SEQ1;A0A1B0GVZ8;A0A1B0GUD1;A0A1B0GU48;A0A1B0GV09;Q9H9B1-4;Q9H9B1-3;Q9H9B1;A0A0C4DGF8 A0A0D9SER9 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 T(0.569)DS(0.431)PWIKPAR 80.69 0.00046379 9484800.0 1920.5 1624.1 1181.1 755.54 2161.3 2136.5 1782.9 1737.8 2266.9 2517.7 2852.5 True False 2244.633448283021 1706.7597529080267 1348.5977400675972 940.6473339174788 1843.3756330567976 2362.58301190608 2106.8298517685926 1984.138471789298 1753.4507694954386 1948.9498213814093 2144.1455250050126 1.046866186136211 0.7960092880841363 0.6289674484965028 0.43870498664743374 0.8597250566994459 1.1018762413062224 0.9825964829339964 0.9253749097952012 0.8177853364180304 0.9089634069389264 1.0 11.06618711073679 -6.98814006804332 24.99263311107854 0.9323850445745133 0.7159406432254521 0.32690584638924003 0.15072482254339967 226.69249026257842 477709.7194183735 0.023008630906245206 0.043459647799939605 1.0276847972214675e-07 6.98814006804332 -0.21644440134906118 T(ph)DSVKTPESEGNPLLEQLEK ddPTM_A549_MK2206_60min_R1 1 TDSVKTPESEGNPLLEQLEK 20 1 Q8WYK2;Q8WYK2-2 Q8WYK2 JDP2 Jun dimerization protein 2 1 T(0.339)DS(0.318)VKT(0.318)PES(0.025)EGNPLLEQLEK 41.482 0.032575 744930.0 571.92 706.7 813.67 350.45 630.88 675.79 505.4 651.22 778.56 751.14 769.88 True False 668.4461138984772 742.6680114402459 929.0606410640947 436.3102657322984 538.0783877216828 747.3016492469031 597.2246379964364 743.5324292776075 602.2174031048427 581.4569523106132 578.6975483929391 1.155087170759186 1.2833439738990735 1.6054338637585812 0.7539521585048103 0.9298093437857877 1.2913509851945681 1.032015151360063 1.284837703809909 1.0406427412336876 1.0047683006871846 1.0 9.176665722030744 -2.0000000003199236 0.1657412074022003 0.9810542413046843 2.193880137976692 0.10595735046095245 0.20786810480263507 82.58076069193866 0.8251307431952839 0.2732947795876418 24.917250005728036 0.009999999992633487 2.0000000003199236 1.2128258966720076 T(ph)DTEEEEEQQQQQK ddPTM_A549_MK2206_60min_R1 1 TDTEEEEEQQQQQK 14 0 Q9UGU0-2;Q9UGU0;A9JX13 Q9UGU0-2 TCF20 Transcription factor 20 1 T(0.579)DT(0.421)EEEEEQQQQQK 72.937 0.0012595 1141700.0 451.76 418.48 345.72 280.75 369.15 313.2 372.63 157.31 535.9 497.98 335.74 True False 528.0060435284234 439.77884452740074 394.7482945526797 349.5337626033465 314.84852401004787 346.3426161146659 440.3320475991532 179.60917424167013 414.5195056564493 385.4859721378696 252.36649204739092 2.0922192928420595 1.7426197945677209 1.564186637259876 1.3850244529995246 1.2475845008414337 1.3723795631696918 1.7448118568627762 0.7116997695872478 1.6425298869653755 1.5274847663432303 1.0 7.979376559024644 -2.000000000000022 0.4460419453096901 1.275606489798786 19.522537569848776 0.4320659752700273 0.27260270197912545 54.62381214697052 0.5867209252931461 0.059227149036336635 914.2504006718257 0.009999999999999488 2.000000000000022 18.24693108004999 T(ph)EEPDRDER ddPTM_A549_PD325901_60min_R1 1 TEEPDRDER 9 1 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 1 T(1)EEPDRDER 63.408 0.0026691999999999996 2430100.0 202.5 256.28 97.667 113.25 273.91 227.44 130.36 222.37 218.53 337.7 175.65 True False 223.057650927379 277.8776150147382 104.29526993938173 120.24519529058867 254.6715065382015 225.58780404749166 135.32092113572912 217.93465590410966 209.34594405854563 316.3775643677576 154.0461635370902 1.4479922498924986 1.8038593667919076 0.6770390611790226 0.7805789675614794 1.6532155081998092 1.4644168921037501 0.8784439549067217 1.4147360174382846 1.3589818743401598 2.0537841196647677 1.0 7.267218942811284 -10.874356002789092 1.099565959027557 0.9985567457789255 1.2742887102665417 0.0 0.46289433025444066 1.155979179356363 2.4607814359879576 0.2456441824610952 0.0580868674490599 1.3355003224353372e-11 10.874356002789092 0.27573196448761617 T(ph)ELLSKVEALK ddPTM_A549_PD325901_60min_R1 1 TELLSKVEALK 11 1 G3V3H7;Q13023-2;Q13023 G3V3H7 AKAP6 A-kinase anchor protein 6 1 T(0.576)ELLS(0.424)KVEALK 40.589 0.054112 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)ESDSGLKK ddPTM_A549_MK2206_60min_R1 1 TESDSGLKK 9 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 T(0.457)ES(0.394)DS(0.149)GLKK 42.041000000000004 0.050741 10553000.0 3865.5 4619.8 4193.1 3811.1 4176.0 3298.9 3196.2 4334.3 5456.0 5772.4 5125.6 True False 4517.901897598552 4854.928087238782 4787.744631172165 4744.8196710867805 3561.7159319137504 3647.9874083674067 3776.908167717077 4948.700298237057 4220.224711441667 4468.410830894091 3852.7720606365237 1.1726366954737886 1.2601129812067549 1.242675288291302 1.231533969934074 0.9244553988292037 0.9468474519005715 0.9803092703836435 1.284451875260815 1.0953735764851957 1.1597911219683879 1.0 11.911681119837642 -6.734720805849127 24.824905413703252 1.0449331773107617 1.2302619355295856 0.4051041939845159 0.09899688204804341 148.57251054190266 138041.65610793483 0.014079552141879321 0.02930225539674334 1.8419557558758624e-07 6.734720805849127 0.18532875821882389 T(ph)ESGEETDLISPPQEEVK ddPTM_A549_PD325901_60min_R1 1 TESGEETDLISPPQEEVK 18 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 T(0.548)ES(0.451)GEETDLISPPQEEVK 113.17 8.110299999999999e-10 6589300.0 1457.5 1835.6 1520.4 1341.1 1746.6 1345.9 1559.3 1519.9 1995.6 1763.9 1795.2 True False 1605.4643270452093 1990.2924540387598 1623.5834869079217 1423.9367011409133 1623.9248414428914 1334.939436631723 1618.6400147817 1489.584402161517 1911.7318718859367 1652.5270529709428 1574.4017807104135 1.0197297454279932 1.264157903289899 1.0312383451289773 0.9044303166999683 1.0314551605182585 0.8479026465718056 1.0280984400635809 0.9461272341100728 1.2142592159819017 1.0496221950570184 1.0 10.620588042197705 -8.740685808602462 24.99900103393975 1.1011779969118174 1.010890086764341 0.08899533120062719 0.1100128264050263 431.2018513467653 519409.90886406245 0.021174458479651336 0.023996681824795075 1.816829577208004e-09 8.740685808602462 -0.0902879101474765 T(ph)ESLVIPSTR ddPTM_A549_MK2206_60min_R1 2 TESLVIPSTR 10 0 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 T(0.974)ES(0.025)LVIPSTR;T(0.969)ES(0.012)LVIPS(0.019)T(0.001)R 91.31299999999999 0.00068205 5890400.0 1979.83 2216.5 1856.42 1579.51 2639.2 2153.8 1817.78 2520.5 2535.3 2553.5 2625.3999999999996 True False 2313.976901803785 2329.310382563044 2119.6882707783334 1966.490020906898 2250.9771761270986 2381.7136864232684 2148.04709627456 2877.788593707518 1961.0585980421654 1976.662576517229 1973.4407226461553 1.17255961896895 1.1803295411071222 1.0741079002039022 0.996477876604301 1.1406358196099242 1.2068838243236748 1.088478144605366 1.4582594555202737 0.9937256161475239 1.001632607371532 1.0 10.946497469497963 T(ph)ESLVIPSTR ddPTM_A549_PD325901_60min_R1 1 TESLVIPSTR 10 0 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 T(0.631)ES(0.368)LVIPS(0.001)TR 88.18700000000001 0.0007513999999999999 4343900.0 2189.1 3244.3 2508.0 2840.9 3273.1 3295.1 3042.3 2622.9 2976.8 3572.0 3216.1 True False 2411.3358204697565 3517.7085468718424 2678.2079618291687 3016.375940847978 3043.2087475820053 3268.265798086925 3158.0763913104374 2570.5842018747558 2851.6954481008484 3346.463310398666 2820.540088537637 0.8549198893747898 1.247175518322686 0.9495372793009075 1.0694320400217663 1.0789453977092078 1.1587375805679188 1.1196708049442412 0.9113801333018898 1.0110458843289707 1.186461885083046 1.0 11.461755726878195 -8.23994753509534 24.924167088101274 0.9983241510695265 1.0745801259552359 0.004720749405691782 0.11519013369486056 1194.5131276230188 1385283.5351155638 0.014398670821432001 0.01857948565615221 5.755094575045919e-09 8.23994753509534 0.07625597488570934 T(ph)ESPATAAETASEELDNR ddPTM_A549_PD325901_60min_R1 1 TESPATAAETASEELDNR 18 0 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4 1 T(0.444)ES(0.405)PAT(0.045)AAET(0.053)AS(0.053)EELDNR 44.196000000000005 0.055851 1395900.0 466.7 497.6 390.44 381.81 693.81 351.22 432.26 619.26 435.41 410.96 738.07 True False 514.0790404336184 539.5344983273517 416.9376063064515 405.39353654657543 645.0791791145612 348.35978076661974 448.7098908417483 606.9083734999278 417.11123187906185 385.0119154651276 647.2920690112161 0.7941995044353163 0.8335255816613486 0.6441259305762125 0.6262915242663832 0.9965813115862283 0.5381802086633993 0.6932108584725656 0.9376113234741511 0.6443941643163161 0.594804005637301 1.0 9.33827301704037 -10.934603953540625 1.0840625674262605 1.0063282558579103 0.7379503210901501 0.0 0.17748191978741185 0.4743304526169429 0.9506225885885908 0.10034612906791733 0.021354575148615624 1.162508257544349e-11 10.934603953540625 -0.2683779347677602 T(ph)ESPIKLSPATPSR ddPTM_A549_MK2206_60min_R1 2 TESPIKLSPATPSR 14 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 T(0.875)ES(0.121)PIKLSPAT(0.003)PS(0.001)R;T(0.872)ES(0.128)PIKLSPATPSR 75.23899999999999 0.00034439 31213000.0 4807.6 5092.9 5521.3 4368.799999999999 6602.1 5558.2 4845.2 5267.5 8400.8 7590.1 7558.8 True False 5619.005345464958 5352.1068564653 6304.303363165882 5439.156196122885 5630.939835748983 6146.365034765443 5725.510122715344 6014.184256042195 6498.032213320955 5875.491138446613 5681.741347732828 0.988958314286358 0.941983544992054 1.1095723964417128 0.9573044359531183 0.9910588129809681 1.0817748747429363 1.0077034085685685 1.058510743091468 1.1436691351523507 1.0341004242988105 1.0 12.472117441279877 -7.256196384719392 24.551463643372106 1.0645047016016174 0.9986384910353718 0.2001984708252077 0.05417868949000478 453.31968059135664 2122758.5793184782 0.009573378764655208 0.01625673608733204 5.543749720508816e-08 7.256196384719392 -0.06586621056624553 T(ph)ESPIKLSPATPSR ddPTM_A549_PD325901_60min_R1 1 TESPIKLSPATPSR 14 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 T(0.729)ES(0.208)PIKLSPAT(0.031)PS(0.031)R 87.16 3.2171e-05 24372000.0 3134.2 3105.1 3458.8 3530.6 4280.6 3552.9 3972.7 4004.5 4071.8 3594.4 4216.3 True False 3452.3816767239086 3366.7776743493973 3693.5349674540357 3748.677143425628 3979.9454232683174 3523.96636036024 4123.883272444853 3924.6271060305207 3900.6764060659207 3367.4489705758597 3697.7218293278283 0.9336509981205056 0.910500527012712 0.998867718539403 1.0137801912771416 1.0763236411408998 0.9530101297535478 1.1152497301817028 1.0613635333255826 1.0548863830503403 0.9106820702053714 1.0 11.852420983026727 -5.925137356782102 2.5913256577914208 1.0330244830772735 0.9201499882917828 0.31519201527031526 0.055006740585603765 0.16772293690774978 2.227131888001733 0.005798234026520053 0.023019884711470057 1.1881263925250278e-06 5.925137356782102 -0.11287449478549061 T(ph)ESPQGLPTVQR ddPTM_A549_PD325901_60min_R1 1 TESPQGLPTVQR 12 0 F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 F5H212 HIVEP1 Zinc finger protein 40 1 T(0.578)ES(0.422)PQGLPTVQR 84.89200000000001 0.00046871 6451100.0 7119.6 7344.1 7759.7 7759.7 9117.1 7324.3 8405.9 9208.0 8430.4 8899.0 8985.7 True False 7842.376550827499 7963.013081121197 8286.31990486674 8238.999045442655 8476.746348287528 7264.653329163927 8725.791124384976 9024.33921646374 8076.099605505708 8337.115621287163 7880.515865045438 0.9951603023366645 1.0104685045355573 1.051494603496869 1.0454898113951263 1.0756588138965257 0.9218499719525709 1.1072614120464896 1.1451457456601044 1.0248186468766334 1.0579403384322852 1.0 12.944074357438046 -9.181379379613118 3.7616213591155514 1.0094919807577596 1.0442667913157169 0.0 0.057497700363356635 0.43946996264007165 12.927217969019683 0.010618641644484374 0.010173187381936885 6.585983227891152e-10 9.181379379613118 0.03477481055795728 T(ph)FGHNT(ph)MDAVPR ddPTM_A549_MK2206_60min_R1 9 TFGHNTMDAVPR 12 0 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 2 T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR 113.47 6.225e-05 145516700.0 15689.67 14332.11 11819.160000000002 12128.46 20766.6 16274.68 15015.219999999998 16039.680000000002 23295.2 19567.3 20455.67 True False 18337.702720397116 15061.553181608679 13495.294611376976 15099.93324446725 17711.86064934868 17996.855835341743 17743.291113844185 18313.353759459864 18018.874394790306 15147.03333991995 15375.962591228485 1.1926214447775916 0.9795518877108113 0.877687789060805 0.9820479956865463 1.1519188177169963 1.17045392953859 1.1539629475923796 1.1910378716651582 1.1718859413113767 0.9851112247477025 1.0 13.908389110789697 -6.752020228293482 24.967052667532304 1.1079138925341157 0.9966404802703124 0.22993524162856627 0.09475297153613534 246.33611841633493 652950.4540870904 0.014680568783660095 0.030237322211795186 1.7700265132228428e-07 6.752020228293482 -0.11127341226380327 T(ph)FGHNT(ph)MDAVPR ddPTM_A549_PD325901_60min_R1 6 TFGHNTMDAVPR 12 0 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 2 T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR;T(1)FGHNT(1)MDAVPR 105.53 6.6345e-05 148309500.0 10359.99 11093.77 11181.5 12421.23 13067.6 10487.320000000002 11590.8 12098.2 12732.309999999998 12844.03 13033.1 True False 11411.728558178456 12028.680931489202 11940.343829821708 13188.46116643991 12149.776856772667 10401.91474297987 12031.894236729131 11856.891910145703 12197.215288500716 12033.05575382413 11430.111323627956 0.9983917247234942 1.0523677846097528 1.0446393295521992 1.1538348834081038 1.062962250565053 0.9100449198143301 1.0526489109390553 1.0373382703312364 1.0671125541259627 1.0527505299926332 1.0 13.480551834306029 -7.041809404395239 24.99637444707266 1.025422338105265 1.0663442615471068 0.13376937896224328 0.05245346507029518 829.3718733533954 495851.4778673544 0.007948372726708825 0.013768188814547406 9.082190260909419e-08 7.041809404395239 0.04092192344184187 T(ph)FNSPNLK ddPTM_A549_MK2206_60min_R1 1 TFNSPNLK 8 0 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;A0A087WZ85;A0A087WTM1;Q9Y6N7-5 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 T(0.764)FNS(0.236)PNLK 99.568 0.0025500999999999996 22996000.0 3633.9 4840.2 4055.9 4043.7 4965.9 4595.2 4561.6 5011.9 5719.8 6441.6 5920.1 True False 4247.213479674911 5086.545505834267 4631.087608111228 5034.406681528592 4235.422688287954 5081.4610139531105 5390.383673693203 5722.352173300021 4424.2744326437005 4986.438086114505 4449.975783552031 0.9544351893719132 1.1430501542581692 1.040699507900385 1.1313335007657188 0.9517855589108806 1.141907565595114 1.2113287657917375 1.285928834590727 0.9942243840959027 1.12055398246106 1.0 12.119581769719897 T(ph)FNSPNLK ddPTM_A549_PD325901_60min_R1 1 TFNSPNLK 8 0 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;A0A087WZ85;A0A087WTM1;Q9Y6N7-5 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 T(0.709)FNS(0.291)PNLK 92.538 0.0027369 25491000.0 5268.9 5974.9 5429.7 5597.5 6311.5 5599.1 5628.3 5958.1 6527.8 6738.8 6485.8 True False 5803.794849240826 6478.425791913376 5798.192093438531 5943.244862155147 5868.202013492963 5553.502785975692 5842.488036423935 5839.261021460974 6253.4592670359825 6313.311017949197 5688.087716873664 1.0203420091472777 1.138946182685471 1.019357011010615 1.044858159364273 1.0316651756415414 0.9763391604354611 1.0271445039590799 1.0265771753376545 1.0993957158018413 1.1099180132579203 1.0 12.473727997812606 T(ph)FPASNYTVSSR ddPTM_A549_MK2206_60min_R1 2 TFPASNYTVSSR 12 0 O95835-2;O95835;Q6PJG3 O95835-2 LATS1 Serine/threonine-protein kinase LATS1 1 T(1)FPASNYTVSSR;T(0.999)FPAS(0.001)NYTVSSR 110.44 8.72e-05 16414100.0 7122.0 8606.9 7310.299999999999 7927.0 10374.2 8139.799999999999 7734.4 8120.5 12233.7 10529.7 12822.3 True False 8324.019483817578 9044.954446957761 8347.010464157274 9869.11535585655 8848.16892261964 9001.148233238058 9139.640364304785 9271.60574298825 9462.78648320453 8151.033456805749 9638.169032522965 0.8636515354450695 0.9384515270936352 0.8660369449831379 1.0239616386218462 0.9180342130089694 0.9339064507858963 0.9482755836159391 0.9619675388242531 0.9818033333170829 0.8457035178881968 1.0 13.234543387695188 -2.0000000000054654 0.15576981716107927 1.0121128328071671 0.5300142680027438 0.0 0.05859730288631451 34.52678677837332 0.33146315735906323 0.05287227549681276 3.8293388233905183 0.009999999999874155 2.0000000000054654 -0.48209856480442337 T(ph)FSLTEVR ddPTM_A549_PD325901_60min_R1 2 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.948)FS(0.052)LTEVR;T(0.572)FS(0.426)LT(0.002)EVR 134.25 0.0011347999999999998 139758000.0 4056.0 3702.8 4556.9 4490.5 4675.0 4242.6 3707.7 4076.9 4360.9 4542.6 5074.4 True False 4467.762134130617 4014.847950977729 4866.158636865761 4767.867986334559 4346.6441278744505 4208.049672229548 3848.79855243129 3995.583031233822 4177.626538438252 4255.779460755035 4450.2809692719065 1.00392810363647 0.9021560613137158 1.0934497552998086 1.0713633631798785 0.9767122925242152 0.945569437364763 0.8648439455859743 0.8978271391901631 0.9387332097195062 0.9562945553640643 1.0 12.119680708421782 -6.98999487990135 24.075540740450883 0.9541374401652364 1.0160233479060385 0.2883300233482883 0.05699467793391649 190.24585086493923 457786.7469950088 0.009182819542034268 0.01733801489462578 1.023305056426561e-07 6.98999487990135 0.06188590774080216 T(ph)FSPSKPAK ddPTM_A549_PD325901_60min_R1 1 TFSPSKPAK 9 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 T(0.555)FS(0.393)PS(0.053)KPAK 49.5 0.011918999999999999 23257000.0 4212.2 4244.1 4114.3 3991.0 4849.4 4438.3 4585.9 4568.2 4050.5 4140.4 4358.6 True False 4639.819443142253 4601.765201670247 4393.521139295751 4237.5150057813635 4508.794873521789 4402.155956313675 4760.418934000768 4477.0836673164295 3880.271570993179 3878.974437394914 3822.51983144185 1.2138117387849152 1.2038564623834709 1.1493782460347681 1.1085658656172304 1.1795347237795957 1.1516371792512552 1.2453614746074826 1.171238833214288 1.0151082903681223 1.0147689504417219 1.0 11.900308271048322 -8.764386893221525 5.793821305314823 1.0066896568312471 1.1773836750057216 0.8263550735496905 0.03431060851871106 0.04457906121336081 5.113598935470752 0.006115208500172849 0.006688454568059046 1.7203353235599905e-09 8.764386893221525 0.1706940181744745 T(ph)FSPTYGLLR ddPTM_A549_MK2206_60min_R1 1 TFSPTYGLLR 10 0 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 T(0.866)FS(0.12)PT(0.014)YGLLR 90.82700000000001 0.00069283 6474800.0 1361.5 1934.1 1575.8 1613.1 2391.5 1824.4 1574.0 1738.9 2260.7 2471.4 2427.8 True False 1591.2879145208708 2032.5374287909692 1799.2721351270177 2008.309572414811 2039.7135180008945 2017.4567970612918 1859.9754258139917 1985.3944001579057 1748.6550595960737 1913.1090235381557 1824.9102561287182 0.8719814627468623 1.113773908588087 0.9859510236650826 1.1004977179947182 1.1177062056343803 1.1055101423677858 1.0192147364877324 1.0879408417428873 0.958214275865593 1.048330468368641 1.0 10.833609802779918 -8.766531520234436 24.99383854101224 0.9802678502890667 1.0550127293126565 0.0558520442095628 0.07270500068276027 142.96057082980116 701693.8347235972 0.011303785830839071 0.012217789273687779 1.7118609287140364e-09 8.766531520234436 0.07474487902358984 T(ph)FSYIK ddPTM_A549_PD325901_60min_R1 1 TFSYIK 6 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 T(0.525)FS(0.473)Y(0.002)IK 89.75200000000001 0.040121 29857000.0 4602.2 4216.7 4625.9 4377.9 5092.8 4448.7 4778.0 4754.7 4155.5 6131.2 5512.7 True False 5069.411956039425 4572.056107509935 4939.841391796466 4648.312940067711 4735.099297206204 4412.471262161786 4959.829404621925 4659.863778510008 3980.8587861405135 5744.074985642863 4834.672847884525 1.0485532559369788 0.9456805561332858 1.0217529804437457 0.9614534605173215 0.9794042836379527 0.912672149904108 1.0258872855879304 0.9638426270246999 0.82339775852308 1.1881000362116039 1.0 12.239202553536236 -8.539905899736052 24.985688914302536 0.9153947948226143 0.9820323432457579 0.0 0.09745784491165738 326.1693300391775 478619.5372838251 0.011716741160702222 0.013287025471579693 2.8846564650832257e-09 8.539905899736052 0.06663754842314362 T(ph)FWSPELKK ddPTM_A549_MK2206_60min_R1 1 TFWSPELKK 9 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EPP6;O15083 X6RM00 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 1 T(0.711)FWS(0.289)PELKK 84.605 0.00082738 30295000.0 5286.0 4892.4 4002.2 3041.7 7972.5 6519.9 5468.7 5192.1 8083.8 8247.2 8322.0 True False 6178.147569707914 5141.402262870039 4569.772140630378 3786.916636547101 6799.755811106888 7209.831490440646 6462.292002000616 5928.09607513938 6252.832207175977 6384.151792070843 6255.417724484386 0.9876474828413092 0.8219118993038675 0.7305302926044079 0.6053818950770781 1.0870186629570562 1.1525739459765543 1.033071217083793 0.9476738942526839 0.9995866755151636 1.0205796116672716 1.0 12.610890512605504 -6.779054307615287 24.999960535558515 1.0151325536388025 0.7849183003004634 0.5897523034558827 0.09866827346070084 136.65165346522062 193942.45334929466 0.01452240203475124 0.02748719678391035 1.6632046571072622e-07 6.779054307615287 -0.23021425333833911 T(ph)GGSPSVR ddPTM_A549_MK2206_60min_R1 1 TGGSPSVR 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 T(0.502)GGS(0.498)PSVR 114.89 0.0013957000000000002 135730000.0 3004.5 3011.9 2955.5 2362.1 3941.9 3343.4 2525.8 2776.1 4218.3 4604.0 4377.7 True False 3511.586147027509 3165.192845134959 3374.6343415204333 2940.8146060386975 3362.0517318033567 3697.1963688306996 2984.7051655152345 3169.6206764496897 3262.861785240907 3563.9532023831302 3290.5962716264453 1.0671580033401773 0.961890363891556 1.0255388576892936 0.893702649394038 1.0217150492733018 1.123564261197951 0.9070408276005194 0.963235965402416 0.9915715924725612 1.0830721571995134 1.0 11.684133315484056 -5.245767069718096 23.22872453328624 0.9917679729225725 1.0671581513337374 0.08259761228461993 0.0648873611446713 1732.589888205974 2567844.212146187 0.007410383715559923 0.23150863670284103 5.678490849461037e-06 5.245767069718096 0.07539017841116491 T(ph)GKSVKDVDR ddPTM_A549_MK2206_60min_R1 1 TGKSVKDVDR 10 2 Q8WU79 Q8WU79 SMAP2 Stromal membrane-associated protein 2 1 T(0.998)GKS(0.002)VKDVDR 42.041000000000004 0.028418000000000002 7702500.0 715.94 649.78 603.43 731.99 989.66 569.9 611.14 790.37 1046.5 894.18 1000.5 True False 836.7731689475374 682.8510265652228 689.0054477089069 911.3275828602794 844.0823249946751 630.2064397309967 722.1762272757072 902.4073679066104 809.4694209171006 692.184116965019 752.0482376047377 1.112658905514688 0.9079883342857009 0.9161718800158071 1.2117940542788108 1.1223779044853088 0.837986725077895 0.960279129934308 1.1999328271558276 1.0763530588081005 0.9203985626900942 1.0 9.554681391466486 T(ph)GLSPLK ddPTM_A549_MK2206_60min_R1 1 TGLSPLK 7 0 P0C7P0 P0C7P0 CISD3 CDGSH iron-sulfur domain-containing protein 3, mitochondrial 1 T(0.665)GLS(0.335)PLK 61.961999999999996 0.029287999999999998 4204600.0 1346.7 1301.7 1481.7 1063.5 1393.2 1237.4 1292.6 1134.2 1971.8 1945.0 1798.2 True False 1573.99003634613 1367.9509699897662 1691.8273401559225 1324.0575477423292 1188.2621255608803 1368.3408466803578 1527.4486883145905 1294.9763233418234 1525.190448317573 1505.6231491388337 1351.6573122047366 1.164488973746414 1.012054577471602 1.251668840082197 0.9795807974305348 0.8791149315965772 1.0123430209158621 1.1300561721691975 0.9580655626606578 1.1283854528406911 1.1139089290930981 1.0 10.400513713908113 -6.291009340049866 24.97256335431813 1.0387142757941503 1.129669278172801 0.23914862536285164 0.09026990375538002 916.0460647531577 773622.2869847239 0.012989540191385717 0.03018973590501764 5.116708312962556e-07 6.291009340049866 0.09095500237865073 T(ph)GQAGSLSGSPKPFSPQLSAPITTK ddPTM_A549_PD325901_60min_R1 1 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-17;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 T(0.249)GQAGS(0.249)LS(0.249)GS(0.249)PKPFS(0.005)PQLSAPITTK 41.423 0.031368 2809500.0 1767.2 1454.1 1716.1 2251.8 1861.1 2216.9 1804.8 1911.0 1938.1 2290.3 2115.8 True False 1946.6048430561186 1576.6421101643937 1832.564865747622 2390.8885717911485 1730.382756446447 2198.846301410853 1873.482651624456 1872.883605849501 1856.6483969243002 2145.690067134958 1855.570013161261 1.049060304515142 0.8496807444513135 0.987602112962342 1.2884927837984872 0.9325343394068234 1.1849977558457985 1.0096534425196266 1.0093306059946203 1.0005811603741117 1.1563509066841575 1.0 10.857646721555756 -7.97379785536898 24.989796962387587 1.0013674854458465 1.0470860248104779 0.0 0.11947452988690302 673.0996292992737 641954.719369135 0.016623809801536087 0.022968588808890914 1.0621898439567695e-08 7.97379785536898 0.04571853936463133 T(ph)GSESS(ph)QTGTSTTSSR ddPTM_A549_MK2206_60min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.834)GS(0.156)ES(0.01)S(1)QTGTSTTSSR 243.95 1.9795999999999998e-65 185720000.0 1788.8 2106.5 2020.0 2164.9 3544.0 3525.8 2412.9 3755.7 4688.0 3562.0 4125.7 True False 2090.705708038877 2213.7118524110315 2306.4663745123585 2695.3005971860534 3022.682294708411 3898.897815763378 2851.292696916505 4288.08197634887 3626.1754851976784 2757.341726083559 3101.1748264726316 0.6741657033302144 0.713830072885305 0.7437395514833977 0.8691224287576745 0.9746894205724286 1.257232511524705 0.9194233980544884 1.3827282292324878 1.1692908939681412 0.8891281144635891 1.0 11.598599143787583 -6.632857247873649 1.6353731885573664 1.1051965947780207 0.7014521186796276 0.60589439869002 0.13604131725328902 0.17359928957650952 0.9271490847149731 0.018693830125609292 0.05067331139101804 2.3288566245234453e-07 6.632857247873649 -0.40374447609839303 T(ph)GSESS(ph)QTGTSTTSSR ddPTM_A549_PD325901_60min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.973)GS(0.026)ESS(0.998)QT(0.002)GTSTTSSR 303.44 5.281999999999999e-143 310170000.0 6265.7 6459.5 5777.4 6144.2 8120.3 5876.4 5348.7 6472.9 6942.0 7255.2 6970.9 True False 6901.789251435447 7003.864734617224 6169.489106328484 6523.713279509361 7549.9581415142075 5828.544546714213 5552.247705420945 6343.792931608186 6650.251881455283 6797.1054338198255 6113.523492175927 1.128938043710528 1.1456347135298905 1.0091543958609437 1.0670954790405884 1.2349601913162886 0.9533854828845544 0.9081911131161431 1.0376655851125718 1.0877936250619238 1.111814723950721 1.0 12.577788392944331 -7.286981561486789 24.99982979199422 1.0254972642419247 1.1099574310299811 0.3083026124181072 0.07406864072831662 876.6895257798035 858071.6396345389 0.011345719328883966 0.018140903531323107 5.164382948377407e-08 7.286981561486789 0.08446016678805646 T(ph)GSGGVASSSESNR ddPTM_A549_MK2206_60min_R1 1 TGSGGVASSSESNR 14 0 K7EMT0;Q15428 K7EMT0 SF3A2 Splicing factor 3A subunit 2 1 T(0.893)GS(0.107)GGVASSSESNR 73.887 0.0010193 2876700.0 266.21 374.97 432.56 471.26 422.89 512.08 207.88 262.94 524.21 539.78 565.13 True False 311.1397397903789 394.05437137363657 493.90351235597336 586.7187211556652 360.68344119899547 566.2679657088064 245.64910515769532 300.21255021997797 405.47727199135534 417.8433231065086 424.79262420546297 0.7324508997121554 0.9276393913634456 1.1626932395066327 1.3811885793758087 0.8490812237468152 1.3330456637940937 0.5782800622236797 0.7067273137839881 0.9545299256308056 0.983640720900104 1.0 8.73061490621203 T(ph)GSGQGPSSTGQPGR ddPTM_A549_MK2206_60min_R1 2 TGSGQGPSSTGQPGR 15 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.499)GS(0.499)GQGPS(0.001)S(0.001)T(0.001)GQPGR;T(0.486)GS(0.486)GQGPS(0.01)S(0.01)T(0.01)GQPGR 57.678999999999995 0.010504000000000001 5163000.0 356.46000000000004 398.28 368.49 330.23 502.81 323.47 249.736 383.26 355.5 756.9200000000001 460.24 True False 416.6217333897243 418.5507508085764 420.7474229426033 411.13636482458804 428.8473150683796 357.69938069799167 295.10979856485585 437.58827868452425 274.9798176168462 585.9312462962291 345.9497060221932 1.2042841087513378 1.20986011412227 1.2162098004951383 1.1884281375808223 1.239623296690613 1.0339635342110818 0.8530424897829632 1.2648898700218936 0.794854896044357 1.693689100168337 1.0 8.434418504670258 -7.43444760840171 3.5808523970653003 0.9301148427758844 1.210069354973909 0.0 0.25702855479841724 0.1478933228180389 3.5729411061391994 0.018952147569059177 0.03070269694473828 3.6774975460341144e-08 7.43444760840171 0.2799545121980246 T(ph)GSGSPFAGNSPAR ddPTM_A549_MK2206_60min_R1 1 TGSGSPFAGNSPAR 14 0 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.599)GS(0.036)GS(0.364)PFAGNSPAR 196.18 3.4301999999999997e-31 42945000.0 4946.5 4782.4 4540.8 3964.5 5372.2 3817.7 3932.4 3662.4 6513.6 5753.3 5758.5 True False 5781.348269686 5025.803732718028 5184.753719497879 4935.80267797317 4581.956496510305 4221.686480015837 4646.866178189921 4181.556415629604 5038.2800000818215 4453.625534159613 4328.505523485139 1.3356453487972197 1.1610944482915786 1.197816126459121 1.1403018088328694 1.0585539215902624 0.9753219574539679 1.0735497859428513 0.9660508443253141 1.1639767981687132 1.0289060531390366 1.0 12.07965328512885 -5.148358022779742 0.7175093315734045 1.0623417604540213 1.5074665906602078 0.6655683006289171 0.06177149265344777 1.8916678088281178 0.607716123910123 0.012128946257234739 0.7047398052196376 7.106274465429896e-06 5.148358022779742 0.44512483020618654 T(ph)GSGSPFAGNSPAR ddPTM_A549_PD325901_60min_R1 1 TGSGSPFAGNSPAR 14 0 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.668)GS(0.034)GS(0.298)PFAGNSPAR 207.06 2.1166999999999996e-32 54932000.0 11688.0 13283.0 13369.0 12269.0 14634.0 12793.0 13761.0 13763.0 14003.0 14616.0 15250.0 True False 12874.55715574916 14402.405026692548 14276.300734327802 13026.828265079324 13606.158324559308 12688.818049505639 14284.682385308137 13488.486168135363 13414.502606744221 13693.143265617835 13374.346677714919 0.9626307337465286 1.0768679303558533 1.0674391114831627 0.974016045717235 1.0173325585488708 0.9487430193991049 1.068065807588947 1.0085342105428319 1.003002459110486 1.0238364232350963 1.0 13.707180798701248 -6.260565316511444 24.99949042279892 1.0026213356424563 1.0397681244609307 0.1004196412853412 0.039085978224974234 102.5982301638362 2934462.1554878512 0.004877316909975595 0.01206223705552852 5.488260077103752e-07 6.260565316511444 0.03714678881847444 T(ph)GSNIS(ph)GASSDISLDEQYKHQLEETKK ddPTM_A549_MK2206_60min_R1 1 TGSNISGASSDISLDEQYKHQLEETKK 27 2 P22059 P22059 OSBP Oxysterol-binding protein 1 2 T(0.53)GS(0.544)NIS(0.698)GAS(0.185)S(0.042)DIS(0.001)LDEQYKHQLEETKK 60.521 0.00026435 2244000.0 644.78 739.78 565.99 840.75 1028.5 673.25 581.89 560.62 611.11 1114.0 1304.6 True False 753.6031006425019 777.4316421441415 646.2558927278466 1046.7337877427024 877.2090124457113 744.4928681328195 687.611880893839 640.089601826744 472.6945607421402 862.3466262933987 980.6318148717049 0.7684873050351676 0.7927864774057449 0.6590199123943328 1.0674075344778056 0.89453452268472 0.7591971388672727 0.7011927111336874 0.6527318328036158 0.48203061900860555 0.8793785936939224 1.0 9.937567757856684 T(ph)GSNISGASSDISLDEQYKHQLEETKK ddPTM_A549_MK2206_60min_R1 3 TGSNISGASSDISLDEQYKHQLEETKK 27 2 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.514)GS(0.425)NIS(0.061)GASSDISLDEQYKHQLEETKK;T(0.548)GS(0.433)NIS(0.02)GASSDISLDEQYKHQLEETKK;T(0.536)GS(0.462)NIS(0.001)GAS(0.001)SDISLDEQYKHQLEETKK 222.98 1.3487999999999996e-95 170111000.0 5156.6 6264.200000000001 4776.9 4085.2 7328.6 4906.0 4563.9 5301.0 9203.5 8284.8 7798.3 True False 6026.908013234171 6583.0210234384995 5454.336249706969 5086.074183391598 6250.572648137718 5425.149663660763 5393.101553921521 6052.432983631637 7118.921944969462 6413.257925956505 5861.766887869092 1.0281725849089698 1.1230438107428053 0.9304935447014621 0.8676691312848371 1.066329106514498 0.9255143999138029 0.9200470876933929 1.032527068955459 1.2144669143534261 1.0940827311349963 1.0 12.517119880392993 -8.527966337798649 24.961787832947156 1.1024455710840582 0.9803368931180009 0.2979307840288201 0.08256168070216122 150.0040447851036 735976.7158296012 0.017098434767459435 0.01942004942361596 2.965061202757817e-09 8.527966337798649 -0.12210867796605729 T(ph)GSNISGASSDISLDEQYKHQLEETKK ddPTM_A549_PD325901_60min_R1 1 TGSNISGASSDISLDEQYKHQLEETKK 27 2 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.491)GS(0.491)NIS(0.018)GASSDISLDEQYKHQLEETKK 226.64 9.259799999999998e-96 160680000.0 2300.8 1896.3 2260.3 2965.4 2585.4 3293.7 2587.2 3228.1 3507.8 3214.7 3109.2 True False 2534.375522240561 2056.107856065428 2413.6975502880646 3148.566023087962 2403.810423145798 3266.877199222756 2685.657311770164 3163.7130131045396 3360.3793647030907 3011.7232933758664 2726.7881108427027 0.9294361788372778 0.7540402013231591 0.8851797250729985 1.1546793865530354 0.8815538008205962 1.1980678609505677 0.9849160266949282 1.1602342699546269 1.2323580814149067 1.1044948015579787 1.0 11.412986882490163 -6.167542117353464 4.8418351335122845 1.0989345602971161 0.837757597511334 0.4954455621239967 0.10476266354855229 0.14529186563608207 5.631973582562768 0.016090190401839823 0.04410012621843883 6.799201039767884e-07 6.167542117353464 -0.26117696278578206 T(ph)GSPGPELLFHEGQQK ddPTM_A549_MK2206_60min_R1 1 TGSPGPELLFHEGQQK 16 0 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 T(0.574)GS(0.426)PGPELLFHEGQQK 189.9 1.8278999999999998e-34 31656000.0 2117.6 2180.3 1796.3 1837.1 2598.3 1867.3 1619.4 2038.9 2877.4 2331.8 2958.4 True False 2474.999109650675 2291.267957185746 2051.0423507606683 2287.1895824705534 2216.0935119471983 2064.8964465865765 1913.6240181468727 2327.920318869374 2225.673494263608 1805.044760494566 2223.7476323137003 1.1129856075779427 1.0303633037719278 0.9223359345982347 1.028529294077694 0.9965580085369048 0.9285660011869932 0.860540103714845 1.0468455525446867 1.0008660433953578 0.8117129544131343 1.0 11.11877735407758 -5.379677306512057 3.587010680338768 0.9868721283470097 1.1145267473159184 0.21251758510533325 0.07403577391148468 0.21308915357326735 4.37224893415855 0.007074190651629601 0.057756904148997916 4.171792447047887e-06 5.379677306512057 0.12765461896890873 T(ph)GSSGALGPPERR ddPTM_A549_MK2206_60min_R1 1 TGSSGALGPPERR 13 1 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 T(0.545)GS(0.362)S(0.094)GALGPPERR 56.872 0.009113 13136000.0 873.25 982.86 846.77 859.67 1207.8 799.86 759.51 855.83 1321.3 1059.1 1585.6 True False 1020.6332510872929 1032.8833758655148 966.8547187850638 1070.2891885920526 1030.1342199629853 884.5006542959027 897.5031357433196 977.1465233694521 1022.0276596825275 819.8485744231051 1191.8517596662393 0.8563424459541062 0.8666206744996195 0.8112206161073399 0.8980052929499986 0.8643140487970243 0.7421230426706709 0.7530325214225067 0.8198557542450479 0.8575123973208979 0.6878779745668133 1.0 10.218989091859871 -10.163443791183678 0.7687139483003885 0.9941019787509442 0.8274955100466077 0.0 0.10137845513862082 0.3090417169154594 0.3556693587269782 0.026964644390867532 0.010302512908407339 6.863667060738457e-11 10.163443791183678 -0.16660646870433649 T(ph)GSSGALGPPERR ddPTM_A549_PD325901_60min_R1 2 TGSSGALGPPERR 13 1 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 T(0.641)GS(0.294)S(0.066)GALGPPERR;T(0.872)GS(0.105)S(0.023)GALGPPERR 90.725 0.0001136 45126000.0 3732.0 4094.1 4630.1 4319.0 4493.4 5505.9 5241.8 4803.2 4917.5 4547.6 5241.3 True False 4110.869892646809 4439.124175245197 4944.326429053122 4585.774820839315 4177.799085388465 5461.061775875324 5441.279567423022 4707.396407962493 4710.834576066891 4260.463759901729 4596.653327338175 0.8943180178931021 0.965729599150737 1.075636137197294 0.9976333854819635 0.9088784356526056 1.1880516947832807 1.183748083646315 1.0240921106592233 1.02484008268573 0.9268621008599911 1.0 12.166368149035302 -5.499833826060789 3.8059126049510623 1.0313766721591004 0.9022041503625293 0.20867419187911507 0.08429412031468836 0.2648327437981642 7.966952427591052 0.011112285804338961 0.0671790555140691 3.163487872832964e-06 5.499833826060789 -0.12917252179657113 T(ph)GSVGIGNLQR ddPTM_A549_MK2206_60min_R1 1 TGSVGIGNLQR 11 0 Q99569-2;Q99569 Q99569-2 PKP4 Plakophilin-4 1 T(0.959)GS(0.041)VGIGNLQR 113.95 2.5076999999999997e-05 9473300.0 2711.5 3378.0 2974.5 2357.6 4008.7 3253.9 2534.7 3230.2 4295.4 4569.0 4166.0 True False 3169.1349101897454 3549.925771395428 3396.3288272212935 2935.2121058366843 3419.0255402927783 3598.2255382359876 2995.2221803117664 3688.090742072613 3322.4987583443067 3536.8597266916863 3131.4672242492124 1.0120287658286329 1.1336301858457238 1.0845806722551865 0.9373280624198194 1.0918286207234724 1.1490541910744996 0.9564916270295272 1.1777516665392704 1.0610038427404889 1.129457686576831 1.0 11.612623063601392 -10.292057503673172 0.9812210880193842 1.0044289535447914 1.0675829728807316 0.0 0.08087677210370156 0.8339368436618804 1.5730627469912415 0.030443260988206197 0.01260021740980893 5.1043740996329535e-11 10.292057503673172 0.06315401933594011 T(ph)GSYGALAEITASK ddPTM_A549_MK2206_60min_R1 2 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.627)GS(0.373)YGALAEITASK;T(0.5)GS(0.5)YGALAEITASK 189.33 2.521e-26 197204500.0 6002.39 7021.39 7060.57 6088.57 8543.96 6196.009999999999 6526.48 7035.450000000001 8571.32 8992.18 9766.73 True False 7015.446687654004 7378.748760218515 8061.864994995405 7580.269923326288 7287.15480211537 6851.6676656214295 7712.256935874521 8032.746582661997 6629.929705585441 6960.840292659766 7341.381392964835 0.955603082326826 1.005089964034492 1.0981400588615382 1.032539997253157 0.992613571214073 0.9332940626388526 1.0505184955061853 1.0941737191803833 0.9030902156832269 0.9481649188435113 1.0 12.841835838366562 -8.774192880284318 24.999929942063694 0.9542370529782649 1.0199371745875772 0.2604552477692089 0.052293633044127506 265.31366355624806 520076.98066933063 0.010274504014463929 0.010972023696210764 1.6819269122938507e-09 8.774192880284318 0.06570012160931227 T(ph)GSYGALAEITASK ddPTM_A549_PD325901_60min_R1 2 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.499)GS(0.499)Y(0.002)GALAEITASK;T(0.5)GS(0.5)YGALAEITASK 125.5 4.9865e-07 17384500.0 790.6500000000001 838.1800000000001 789.5 796.37 1188.75 1144.94 1091.87 965.3199999999999 708.48 1004.1400000000001 1214.3 True False 870.9162059542332 908.8163701929661 843.0802176491741 845.559966212505 1105.256300964867 1135.6159882436473 1133.42171034419 946.0659353211103 678.7050494055668 940.7384290323957 1064.9487980819163 0.8178010130842385 0.8533897327550762 0.7916626782129332 0.7939911925676113 1.0378492402222048 1.066357359423298 1.064296905527853 0.8883675318710849 0.6373123765461638 0.8833649380390528 1.0 10.056568353114091 T(ph)GTPSDPRR ddPTM_A549_MK2206_60min_R1 3 TGTPSDPRR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 T(0.782)GT(0.132)PS(0.085)DPRR;T(0.663)GT(0.29)PS(0.048)DPRR;T(0.5)GT(0.25)PS(0.25)DPRR 69.915 0.011673000000000001 46069300.0 4017.6600000000003 5513.160000000001 4750.08 4829.06 6679.099999999999 5741.45 5331.75 4691.82 7987.1 7838.349999999999 7929.8 True False 4695.742785643718 5793.756295389701 5423.712770417655 6012.179916784739 5696.613237750268 6349.006428133937 6300.459959710132 5356.899853096133 6178.034602777808 6067.661291029499 5960.611808653725 0.7877954371774979 0.9720069820648646 0.9099255151196743 1.0086514790404815 0.9557094842982092 1.065160193609041 1.0570156490585427 0.8987164447312082 1.036476590172912 1.0179594789615987 1.0 12.541244703941896 -4.135726570862624 0.6960991050597011 1.011965472131621 3.926532896380004e-17 0.5831628837534952 0.05064876651637975 5.6206577930164 0.588418363413088 0.007692052206000345 6.473758511990748 7.315995490959998e-05 4.135726570862624 -1.011965472131621 T(ph)GTPSDPRR ddPTM_A549_PD325901_60min_R1 3 TGTPSDPRR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 T(0.724)GT(0.244)PS(0.032)DPRR;T(0.597)GT(0.353)PS(0.05)DPRR;T(0.681)GT(0.305)PS(0.014)DPRR 70.908 0.010288 60060000.0 4396.43 4721.7 5180.7 5051.7 5292.39 6224.5 5610.299999999999 6153.6 5743.4 5568.8 5977.0 True False 4842.752337119294 5119.614229807589 5532.293456079891 5363.732035756883 4920.670784154324 6173.809735726397 5823.8030365739605 6030.861620594184 5502.024871211507 5217.1850176226435 5241.866891324722 0.9238602271900567 0.9766776486218182 1.0554051773492807 1.0232484240746074 0.938724863902596 1.1777883459696465 1.1110169634815301 1.1505178871625388 1.0496307871375647 0.9952913963261969 1.0 12.35586500390188 -5.538696457163396 2.609338258543735 1.0445595681536424 0.9235632470043049 0.26801790346172816 0.06730627016709773 0.3628156647462455 4.379174147871173 0.009799573122928725 0.07265203848922847 2.8927009807607364e-06 5.538696457163396 -0.12099632114933745 T(ph)HSGEKPYK ddPTM_A549_PD325901_60min_R1 1 THSGEKPYK 9 1 Q7Z3I7;Q9UC07;A0A0C4DG37;Q147U1-3;Q8NDP4;Q147U1;Q9Y2X9-2;Q9Y2X9;Q5SVQ8;Q96IR2;A6NJL1 Q7Z3I7;A6NJL1 ZNF572;ZNF69;ZNF439;ZNF846;ZNF281;ZBTB41;ZNF845;ZSCAN5B Zinc finger protein 572;Zinc finger protein 69;Zinc finger protein 846;Zinc finger protein 439;Zinc finger protein 281;Zinc finger and BTB domain-containing protein 41;Zinc finger protein 845;Zinc finger and SCAN domain-containing protein 5B 1 T(0.923)HS(0.077)GEKPYK 77.062 0.00076934 9417900.0 4533.2 4723.9 5679.5 4559.1 5571.8 5061.7 4423.4 3884.5 6139.0 5444.9 5841.8 True False 4993.407126834539 5121.99963152849 6064.945023607959 4840.705252532654 5180.455989666496 5020.479193401287 4591.7349075773545 3807.020600168702 5880.999178947568 5101.108084767551 5123.295634221308 0.974647469781136 0.9997470373007246 1.1837975897968598 0.944842070053292 1.0111569504331124 0.9799315815130297 0.8962463295903974 0.743080406045577 1.147893777525767 0.9956692818377385 1.0 12.32285642801012 T(ph)HSLLYQPQK ddPTM_A549_MK2206_60min_R1 1 THSLLYQPQK 10 0 H0Y3V3;H0Y5C0;B1ALU1;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;A0A6I8PRJ0;O95490-2;O95490-5;O95490;O95490-7;O95490-6 H0Y3V3 ADGRL2;LPHN2 Latrophilin-2 1 T(0.543)HS(0.456)LLY(0.002)QPQK 44.299 0.053676999999999996 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)HSLLYQPQKK ddPTM_A549_MK2206_60min_R1 1 THSLLYQPQKK 11 1 H0Y3V3;H0Y5C0;B1ALU1;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;A0A6I8PRJ0;O95490-2;O95490-5;O95490;O95490-7;O95490-6 H0Y3V3 ADGRL2;LPHN2 Latrophilin-2 1 T(0.55)HS(0.45)LLY(0.001)QPQKK 53.448 0.0079264 3374600.0 1967.7 1873.6 1983.0 2053.4 2882.9 2153.5 1886.1 1848.6 3515.0 3223.4 2977.7 True False 2299.799654353813 1968.9582372073628 2264.2192181475293 2556.4830921806274 2458.829228954536 2381.3819406223924 2228.779955926155 2110.6447111000666 2718.8581123015865 2495.231701251475 2238.254909660797 1.0274967540235813 0.879684538480809 1.0116002464128035 1.1421769170018519 1.0985474524557914 1.063945813474519 0.9957668120401542 0.9429867447135102 1.2147222823309363 1.1148112265861723 1.0 11.128158635525644 -6.003513907121658 22.58282174278604 1.0836258066040771 0.9516034937771192 0.24827720316250157 0.07840509828529098 45.052716110754005 289574.64834004303 0.013181170089632597 0.03962618050525057 9.91941574449048e-07 6.003513907121658 -0.13202231282695798 T(ph)HSLLYQPQKK ddPTM_A549_PD325901_60min_R1 1 THSLLYQPQKK 11 1 H0Y3V3;H0Y5C0;B1ALU1;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;A0A6I8PRJ0;O95490-2;O95490-5;O95490;O95490-7;O95490-6 H0Y3V3 ADGRL2;LPHN2 Latrophilin-2 1 T(0.543)HS(0.457)LLYQPQKK 61.375 0.0029802 4919000.0 2011.3 2376.8 2512.1 2339.6 3228.0 2644.6 2553.6 2695.6 2861.5 2764.4 2984.4 True False 2215.4856953591975 2577.101277380324 2682.586212484469 2484.111778382881 3001.2764159954527 2623.063254414335 2650.778645383537 2641.8341433427095 2741.2411061342996 2589.855312224546 2617.337719670322 0.8464653524491516 0.9846269581538504 1.0249293365253476 0.9490986813485338 1.1466905449150413 1.0021875414475494 1.012776694983568 1.0093592903538153 1.0473394722938485 0.9894998619248733 1.0 11.353884374526976 -4.960876932405038 1.4834404580963279 1.0243245370764709 0.6398269161840034 0.5336160490458235 0.0465606567754832 1.3127117534966253 1.4675429695527467 0.00608867782610816 0.9176440762633656 1.0942664085631644e-05 4.960876932405038 -0.3844976208924674 T(ph)HTDSSEKELEPEAAEEALENGPK ddPTM_A549_MK2206_60min_R1 2 THTDSSEKELEPEAAEEALENGPK 24 1 Q9H3P7 Q9H3P7 ACBD3 Golgi resident protein GCP60 1 T(0.311)HT(0.259)DS(0.215)S(0.215)EKELEPEAAEEALENGPK;T(0.25)HT(0.25)DS(0.25)S(0.25)EKELEPEAAEEALENGPK 183.25 1.9331e-50 16051400.0 1896.6200000000001 1677.12 1804.0700000000002 1909.3899999999999 2457.1000000000004 1692.12 1612.35 1381.9099999999999 2500.3 2288.2 2826.9 True False 2216.723088092965 1762.4782444412965 2059.9142535972815 2377.1906357157745 2095.663844900689 1871.1790152616497 1905.2931244035506 1577.7999744218819 1933.986042158651 1771.2940307760816 2124.90271152907 1.0432115673182145 0.829439500866854 0.9694157960365991 1.1187291647838122 0.9862399033754629 0.8805951468315263 0.8966495802683175 0.7425281006331365 0.9101527480130908 0.8335882961443758 1.0 11.05318107376766 -7.1986015733764255 16.844683220681205 0.9287761702843046 0.9865967705258081 0.15738204018563906 0.09447471819687789 18.132047138954906 4858.7798331732865 0.014681633501806252 0.025429731710077293 6.329922993082816e-08 7.1986015733764255 0.057820600241503484 T(ph)HTDTESEASILGDSGEYK ddPTM_A549_MK2206_60min_R1 1 THTDTESEASILGDSGEYK 19 0 J3KQ48;Q9Y3E5 J3KQ48 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial 1 T(0.556)HT(0.147)DT(0.187)ES(0.108)EAS(0.002)ILGDSGEYK 48.077 0.013859999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)HTEERLYQCKKCGK ddPTM_A549_MK2206_60min_R1 2 THTEERLYQCKKCGK 15 3 Q96MR9 Q96MR9 ZNF560 Zinc finger protein 560 1 T(0.5)HT(0.5)EERLYQCKKCGK;T(0.5)HT(0.5)EERLYQCKKCGK 41.912 0.038373000000000004 26602000.0 2830.2 3060.0 3186.8 3078.5 4461.5 3063.3 3046.6 3182.3 4979.3 3856.5 4479.200000000001 True False 3307.868568253371 3215.740929683249 3638.7361595524653 3832.732638199117 3805.2192601133124 3387.45637274603 3600.1277841708416 3633.400770385017 3851.4965003081898 2985.3139715444277 3366.8910203689566 0.9824697467905814 0.9551069251213411 1.0807407004084495 1.138359577132708 1.1301878311749818 1.00610811346511 1.0692736302989474 1.0791560369503304 1.1439326301348858 0.8866678349503827 1.0 11.717201309386375 -5.764175175048461 24.95015760409361 1.0754225076176425 0.9687883146927326 0.16026851412850418 0.07275720270219938 54.959248214333016 501248.01745479135 0.00816619134857584 0.027154186558594584 1.7211741899544717e-06 5.764175175048461 -0.10663419292490983 T(ph)HTEERLYQCKKCGK ddPTM_A549_PD325901_60min_R1 1 THTEERLYQCKKCGK 15 3 Q96MR9 Q96MR9 ZNF560 Zinc finger protein 560 1 T(0.5)HT(0.5)EERLYQCKKCGK 60.448 0.0024839000000000003 6708600.0 2426.0 2300.2 1945.6 2678.2 3410.4 2521.2 2981.8 2473.3 2562.2 2288.7 2344.3 True False 2672.285734073191 2494.045926552601 2077.6401158432336 2843.6263313664867 3170.865269241291 2500.668183101197 3095.274030703567 2423.9680912336853 2454.5196442905117 2144.1910914080136 2055.965961742105 1.2997713891181608 1.2130774404646725 1.0105420782758308 1.3831096352183598 1.5422751778217603 1.2162984356911617 1.5055084025227798 1.1789923259136825 1.1938522767228577 1.042911765713841 1.0 11.005600664353233 -9.63474502307637 0.7494922047835759 1.023760979711652 1.2971255851358552 0.3487741775616775 0.1422695843332382 0.47159951208694484 0.5660317697552376 0.05631656320755483 0.03259728320058992 2.31875560589243e-10 9.63474502307637 0.27336460542420316 T(ph)IASDS(ph)EEEAGK ddPTM_A549_PD325901_60min_R1 1 TIASDSEEEAGK 12 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 T(0.972)IAS(0.04)DS(0.987)EEEAGK 113.37 5.3688000000000005e-05 7624000.0 5980.6 6426.5 6836.9 6253.3 7120.7 6116.6 6332.9 6593.6 7158.7 7145.0 7286.3 True False 6587.746109314978 6968.083708803716 7300.893147619552 6639.552138725285 6620.566597081412 6066.78843755227 6573.901974995849 6462.085475420863 6857.844734049835 6693.863480626668 6390.131291661261 1.0309250011672833 1.0904445293474092 1.1425263135276706 1.039032194438556 1.03606112220587 0.9493996540366966 1.0287585144884892 1.0112602042861778 1.073193088066737 1.0475314473368895 1.0 12.64162985775654 -6.492872758418763 20.506224075847268 1.027007861405971 1.088641042053457 0.3665810497315113 0.0379925622314945 72.42750252575391 49495.91669390989 0.005881695798261513 0.013628569312001253 3.214602229529176e-07 6.492872758418763 0.06163318064748591 T(ph)IHTFPCLK ddPTM_A549_MK2206_60min_R1 1 TIHTFPCLK 9 0 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 T(0.847)IHT(0.153)FPCLK 55.721000000000004 0.015205000000000002 1572500.0 991.08 1075.4 1129.4 867.74 1221.2 1349.8 952.67 900.34 1547.7 1206.8 1520.4 True False 1158.350074420378 1130.1332665952173 1289.565902660523 1080.3363389543288 1041.5630977138578 1492.6349400752752 1125.7578074397804 1027.9659521756112 1197.1484211690374 934.1830418409992 1142.8427190946963 1.0135691071628525 0.9888790887082459 1.1283844059329997 0.9453062270984391 0.911379212827232 1.3060720562298083 0.9850505136275884 0.899481560323467 1.047518089030973 0.81742047810482 1.0 10.158411154535349 T(ph)IHTFPCLK ddPTM_A549_PD325901_60min_R1 1 TIHTFPCLK 9 0 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 T(0.898)IHT(0.102)FPCLK 47.823 0.029923 1382900.0 507.94 357.4 558.86 347.46 322.35 229.99 324.2 561.37 314.61 255.13 361.97 True False 559.5056948743351 387.5193522954093 596.7876002981852 368.9218150610858 299.7092480471292 228.11703769294155 336.5376084090471 550.1730349637544 301.388035785746 239.02104825924187 317.449984716883 1.7625003049640364 1.2207256920834868 1.879942129562327 1.1621415429901747 0.9441148605328306 0.7185920575689653 1.0601279716840664 1.7331014693682372 0.9494032140355533 0.7529408088408389 1.0 8.310385498242542 -6.444539977572796 5.978641705793432 1.019629473659303 1.5783325169899283 0.4436603517734835 0.29185890825314625 0.16114032690519234 9.666445021161984 0.03876233227492265 0.0906343149781177 3.5930232082092013e-07 6.444539977572796 0.5587030433306253 T(ph)ISEPDEQRSELPR ddPTM_A549_MK2206_60min_R1 2 TISEPDEQRSELPR 14 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 T(0.548)IS(0.452)EPDEQRSELPR;T(0.542)IS(0.458)EPDEQRSELPR 84.874 8.4358e-05 7735300.0 1022.54 999.9300000000001 1164.63 1051.81 1365.6599999999999 697.9200000000001 680.3399999999999 883.6500000000001 1671.9 1972.87 2050.1800000000003 True False 1195.1197532972244 1050.8221659536505 1329.7920464100634 1309.5034972175458 1164.7732230788622 771.773431158199 803.9489715363976 1008.9100935646298 1293.2173194756824 1527.1972967822774 1541.063723910527 0.7755161157544788 0.6818810602374937 0.8629052944258846 0.8497400054908921 0.7558241784597923 0.5008056572766406 0.5216844437142005 0.654684214488204 0.8391718651283792 0.9910020416981442 1.0 10.589710804054636 -9.29312743549388 1.4126084111572648 0.9544739651329914 0.7025089958723701 0.4821700928138869 0.11415398190279118 0.2554393071162456 1.0555192361353292 0.029311651364890817 0.025294484886585648 5.091814394804742e-10 9.29312743549388 -0.2519649692606213 T(ph)ISGIPR ddPTM_A549_MK2206_60min_R1 4 TISGIPR 7 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 T(0.999)IS(0.001)GIPR;T(0.998)IS(0.002)GIPR;T(0.999)IS(0.001)GIPR;T(1)ISGIPR 93.14299999999999 0.012913999999999998 24891900.0 3924.61 3995.8500000000004 3293.1899999999996 3751.81 5406.57 4437.92 3718.6800000000003 4272.360000000001 5440.24 5241.35 5563.94 True False 4586.988220497799 4199.2216973447075 3760.213861326907 4671.00361842515 4611.270715039972 4907.537748747124 4394.316020626412 4877.980113553761 4208.034326278115 4057.3253947243297 4182.260141067971 1.096772574105464 1.0040555957077326 0.8990865547561824 1.1168610896672666 1.1025786439631777 1.173417621863653 1.050703656015116 1.1663502386315292 1.0061627408006149 0.9701274568942194 1.0 12.030067086559997 -8.948411313595058 24.999910417477714 1.0027185350925911 1.0733967480613187 0.20407034311765326 0.07305568987953405 138.48684161615412 67110.82313187026 0.0129662362488718 0.013802247889710722 1.1261304102482368e-09 8.948411313595058 0.07067821296872756 T(ph)ISGIPR ddPTM_A549_PD325901_60min_R1 2 TISGIPR 7 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 T(0.981)IS(0.019)GIPR;T(0.996)IS(0.004)GIPR 103.42 0.011003 51212000.0 5431.5 4937.7 5981.5 5649.9 6470.6 5628.0 5512.4 7086.4 6686.1 6654.1 6364.8 True False 5982.9018815410345 5353.817307859659 6387.440559681488 5998.881491146112 6016.127378358164 5582.1674339574565 5722.177398501023 6945.056192826747 6405.106468539068 6233.958990404193 5581.969949791471 1.0718262433076233 0.9591268595166237 1.1442986288237018 1.0746889619802085 1.07777853203651 1.000035378937501 1.0251179153543795 1.2441944788839643 1.1474634450116215 1.1168026783514087 1.0 12.446558642422657 T(ph)ISNPEVVMK ddPTM_A549_PD325901_60min_R1 1 TISNPEVVMK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5 A8MQ02 MLLT4 Afadin 1 T(0.616)IS(0.384)NPEVVMK 153.75 1.9753e-08 23667000.0 7982.1 8387.4 9305.0 8263.7 10973.0 8913.2 9081.2 9931.4 9242.5 9340.8 9212.2 True False 8792.436915888553 9094.235633582855 9936.493255510533 8774.129980775611 10202.294334794942 8840.613854362038 9426.790035423315 9733.310435967414 8854.069866659534 8751.020293889096 8079.157800947232 1.0882863204946551 1.1256415405720397 1.2298922115799669 1.0860203745181085 1.2627918139683798 1.0942494344305949 1.1668035539939672 1.2047432016770663 1.0959149560887953 1.0831599666072982 1.0 12.979989194009894 -9.616447742268608 0.8216892957923171 1.0128979231396544 1.1581179685693024 0.3135830625404793 0.06107423670930235 0.2962118856604425 0.42460695179037505 0.01888200536090272 0.01164090634886627 2.4185343375157047e-10 9.616447742268608 0.14522004542964795 T(ph)ISPPTLGTLR ddPTM_A549_MK2206_60min_R1 1 TISPPTLGTLR 11 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 T(0.497)IS(0.497)PPT(0.005)LGTLR 107.11 0.00015327 4844200.0 1321.5 1355.9 1341.0 896.79 1836.9 1366.4 1217.3 1154.1 1942.0 1743.3 1963.4 True False 1544.5368924269785 1424.9095184828475 1531.1739644658778 1116.5035902584334 1566.694443326716 1510.991541057088 1438.4676530135775 1317.6972092830183 1502.1401007367504 1349.487319225567 1475.8335929166838 1.046552199272356 0.9654947043635216 1.037497704222754 0.756524038765029 1.0615657827861638 1.0238224338496873 0.9746814680988118 0.8928494483438738 1.0178248468840427 0.9143898917211803 1.0 10.527314344672776 T(ph)ISPPTLGTLR ddPTM_A549_PD325901_60min_R1 2 TISPPTLGTLR 11 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 T(0.624)IS(0.376)PPTLGTLR;T(0.874)IS(0.126)PPT(0.001)LGTLR 153.74 1.1303e-12 21034500.0 6386.200000000001 6298.6 5747.799999999999 5937.299999999999 6918.4 6563.8 6411.200000000001 6479.0 7089.4 7400.8 7355.6 True False 7034.522322728041 6829.405126938622 6137.880272329218 6304.033536413352 6432.475451184302 6510.346589020954 6655.181724343252 6349.771262322828 6791.457172052594 6933.512224971567 6450.907830990157 1.0904701333561457 1.058673493074907 0.951475425341352 0.9772319961120478 0.9971426688632403 1.0092140144593684 1.0316659141170432 0.9843221184805232 1.0527909171832277 1.074811856970422 1.0 12.655286488780149 -8.758173993363227 24.99514303927354 1.0249290427171258 1.0108663641937363 0.051931395370222844 0.04100461433846135 322.9276649621123 2471898.7577220085 0.007096060258206009 0.00788439559530147 1.7451228563830202e-09 8.758173993363227 -0.014062678523389494 T(ph)ISQEFLTPGK ddPTM_A549_PD325901_60min_R1 1 TISQEFLTPGK 11 0 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;H7BXY5;Q0ZGT2-3 E7ETM8 NEXN Nexilin 1 T(0.561)IS(0.439)QEFLTPGK 65.295 0.0060971 1619600.0 1091.1 1328.9 1207.6 1341.5 1780.8 1298.5 1351.5 1212.3 1299.2 1360.2 1977.3 True False 1201.8676687746329 1440.891066774956 1289.554997888718 1424.3614082324486 1655.7227514264862 1287.9254465163035 1402.9320720691762 1188.1197254690476 1244.5991420897021 1274.3167398668165 1734.1046351374232 0.69307678696066 0.8309135663320393 0.743643129577659 0.8213814664762555 0.9547997957431643 0.7427034219386875 0.8090238868186853 0.6851488090134147 0.7177185948707593 0.7348557371025252 1.0 10.759975237454501 -10.836011160739218 1.0813625849729962 1.0000610235610832 0.7781231782428044 0.0 0.10602091768418745 0.3138935913721623 0.6513596873024232 0.052428692718867485 0.012877994717697698 1.458776771343293e-11 10.836011160739218 -0.22193784531827876 T(ph)ISQSSSLK ddPTM_A549_PD325901_60min_R1 1 TISQSSSLK 9 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 T(0.562)IS(0.325)QS(0.029)S(0.083)S(0.001)LK 141.71 4.1278e-05 245460000.0 14648.0 14873.0 15488.0 14825.0 15835.0 16455.0 14500.0 16416.0 16911.0 17671.0 18472.0 True False 16135.054176712332 16126.399906798046 16539.10881690995 15740.706579982148 14722.804227784369 16320.995935637859 15051.80543470446 16088.570001897124 16200.289479586632 16555.250044248263 16200.061103655738 0.9959872418673325 0.9954530296900503 1.0209287922486725 0.9716448894399583 0.9088116479055743 1.0074650849282802 0.9291202877813738 0.9931178591830462 1.0000140972265124 1.0219251605484607 1.0 13.98371163425039 -8.505881132231243 24.631705177340958 0.9998255717735084 0.9755276620731507 0.15363437621859977 0.03163007908097951 1006.2824817491066 1458231.8919439255 0.005025550289892466 0.006000752898727435 3.119743350839013e-09 8.505881132231243 -0.024297909700357723 T(ph)ISVLASPSVPLLQHR ddPTM_A549_MK2206_60min_R1 1 TISVLASPSVPLLQHR 16 0 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 T(0.5)IS(0.5)VLASPSVPLLQHR 47.68 0.023035 1177200.0 510.33 759.21 441.61 598.93 806.08 386.44 294.73 644.9 978.55 738.31 612.57 True False 596.4612276294054 797.8505461519019 504.23693843980294 745.6678768869896 687.5066998077192 427.33282430188854 348.27862595308625 736.3165499234194 756.9099874232483 571.5252582214356 460.45196292807026 1.2953820933598275 1.732755228315833 1.0950912994990807 1.619425992116955 1.4931127569438083 0.9280725432994724 0.7563842789122669 1.5991169746374683 1.6438413740490219 1.2412266734341553 1.0 8.846906843462959 -11.111966428074222 1.4818740711406795 1.0014680866009245 1.3846363542432167 0.05128264524005932 0.30837925312567344 0.6058883492919969 2.394961882168005 0.2250318754381554 0.049651307394696885 7.727403173257534e-12 11.111966428074222 0.3831682676422923 T(ph)ISVLASPSVPLLQHR ddPTM_A549_PD325901_60min_R1 1 TISVLASPSVPLLQHR 16 0 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 T(0.545)IS(0.455)VLASPSVPLLQHR 89.04899999999999 1.0528e-05 1587500.0 975.24 753.37 1162.4 926.83 1030.5 1030.1 917.82 1040.3 842.06 993.53 1261.1 True False 1074.2456468662576 816.8591338522448 1241.2874540790376 984.0781841163478 958.1212350320046 1021.7112071285661 952.7481423503757 1019.5504004004375 806.6711465425295 930.7983462431089 1105.9926947715592 0.9712954271258918 0.7385755237930984 1.1223288001331901 0.889769153782347 0.8662997862114296 0.9237956199517202 0.8614416233076152 0.9218418939114457 0.7293639011866584 0.8415953836253536 1.0 10.111126141074083 -6.501040039051345 24.83240478658859 0.8761450808858581 0.9372727030846196 0.07203658195669205 0.10341188837988914 1957.2080973214343 2225505.9148000567 0.016834038693860368 0.038800938372377865 3.1547137664228006e-07 6.501040039051345 0.061127622198761555 T(ph)ISVSGSTAK ddPTM_A549_MK2206_60min_R1 1 TISVSGSTAK 10 0 Q8TDJ6;Q8TDJ6-3 Q8TDJ6 DMXL2 DmX-like protein 2 1 T(0.623)IS(0.375)VS(0.002)GSTAK 124.39 2.3185e-05 21038000.0 6522.2 7524.2 6241.7 6665.6 10059.0 7821.0 6620.6 5679.3 10291.0 9647.7 11464.0 True False 7622.987907519665 7907.14964154336 7126.866915739499 8298.672299230157 8579.33442507672 8648.61302884037 7823.477321565508 6484.358167126804 7960.104931350106 7468.277869381348 8617.17240969587 0.8846275257232212 0.9176037411815497 0.827054000651129 0.9630389070424837 0.9956090022550118 1.0036486004514802 0.9078937903995848 0.7524925647107552 0.9237490620929849 0.8666738361853119 1.0 13.072998833822892 -10.16845952584288 1.098698738027103 0.9913854020714935 0.9108678446773464 0.0 0.07819551031150593 0.5972732683761472 1.4385306833224702 0.02703505938601085 0.013371938845189555 6.784853491235025e-11 10.16845952584288 -0.08051755739414712 T(ph)ITLEVEPSDTIENVK ddPTM_A549_MK2206_60min_R1 1 TITLEVEPSDTIENVK 16 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 1 T(0.553)IT(0.447)LEVEPSDTIENVK 102.28 1.218e-06 1151800.0 364.61 761.86 385.28 158.87 615.86 600.47 127.15 700.83 976.55 841.95 713.63 True False 426.1472541413547 800.6354198328363 439.91849741194153 197.7931571319453 525.2678098248085 664.0113368402732 150.25150914374146 800.1747987018604 755.3629842299041 651.7529102403297 536.4159758139623 0.7944343072458182 1.492564457309358 0.8201070013703551 0.3687309216169638 0.9792173117658596 1.2378664446611543 0.2801025993227523 1.4917057559437303 1.4081664571673311 1.2150139809899474 1.0 9.067208394735898 -8.325351009632238 24.999992608462613 1.220552718058814 0.8775887552408383 0.2539041995814435 0.34402266286616 279.27692360089725 109242.6016858642 0.058141434009198044 0.07028957099728933 4.7276899863179064e-09 8.325351009632238 -0.3429639628179757 T(ph)ITPPAAPKPK ddPTM_A549_PD325901_60min_R1 2 TITPPAAPKPK 11 1 Q96BD5-2;Q96BD5;Q96BD5-3 Q96BD5-2 PHF21A PHD finger protein 21A 1 T(0.5)IT(0.5)PPAAPKPK;T(0.53)IT(0.47)PPAAPKPK 50.145 0.010711 12980600.0 3052.8 3115.2 3408.1 3746.6 4181.6 3891.8 3353.6 4054.1 3835.5 3649.0 4339.3 True False 3362.7180086474204 3377.728836795349 3639.394160570172 3978.018972854037 3887.898841736857 3860.1064711221798 3481.223083160336 3973.2377951200774 3674.307273310538 3418.6015172577663 3805.5936090890727 0.8836250934981832 0.8875695052483179 0.9563275889149175 1.045308401652019 1.0216274361117306 1.0143244044510984 0.9147648016976831 1.044052046343207 0.9655017457815314 0.898309664251318 1.0 11.893905792292024 -5.862369612264357 3.6829728130762183 0.9912231337162427 0.8843137357807446 0.4252485193886686 0.04525868438984353 0.11700598605935528 2.9995132095715595 0.00486138735101958 0.017525111732285086 1.3728730752535397e-06 5.862369612264357 -0.10690939793549814 T(ph)KCVMKMVCANKEEK ddPTM_A549_PD325901_60min_R1 1 TKCVMKMVCANKEEK 15 3 P00390-2;P00390-3;P00390;P00390-5;P00390-4 P00390-2 GSR Glutathione reductase, mitochondrial 1 T(1)KCVMKMVCANKEEK 40.856 0.023752000000000002 8734600.0 2057.9 2134.7 2746.3 2344.5 2884.2 2994.3 1884.5 2645.2 2854.8 2814.8 2973.8 True False 2266.8164930540906 2314.598660730301 2932.680432843477 2489.3144402541725 2681.6237419498393 2969.915413557 1956.2156787379681 2592.439410880743 2734.82268383442 2637.0730476232256 2608.0414524713856 0.8691642883613105 0.8874853804708444 1.1244761581778016 0.9544765624393328 1.028213619614338 1.1387531477855546 0.7500707770132464 0.9940177171739896 1.0486116626876831 1.011131569678208 1.0 11.348751084752411 -5.618777096230605 10.047856816815283 1.0118136618402374 0.8737894273455215 0.20363687007252051 0.09662915961067618 0.30733365152171405 28.993156498564858 0.012398969968909513 0.048140384219382215 2.4055971677327346e-06 5.618777096230605 -0.1380242344947159 T(ph)KEVPK ddPTM_A549_PD325901_60min_R1 1 TKEVPK 6 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;H0YII3 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 T(1)KEVPK 43.70399999999999 0.052523 2935100.0 2627.4 2126.3 1805.9 2938.9 2372.3 3971.8 1572.2 2377.4 2299.4 1990.7 3220.4 True False 2894.1317138103504 2305.4907632505005 1928.4592337588886 3120.4291782738305 2205.677831990709 3939.454977646094 1632.0309313408516 2329.980891965779 2202.7642143788935 1865.0068622650138 2824.3112157975825 1.0247212480063217 0.8163019536780873 0.6828069169474631 1.1048460809913345 0.7809613259521146 1.3948374228771372 0.5778509543184205 0.8249731399759339 0.7799297053589171 0.660340422766879 1.0 11.463683355122965 -5.237090992298506 21.825504253508072 0.8898866320163183 1.0247220931940397 0.02942879685772526 0.2215300677879338 3607.7433045790726 3233629.948547144 0.02676935227536491 1.7616264072267853 5.793073086859881e-06 5.237090992298506 0.13483546117772138 T(ph)KFASDDEHDEHDENGATGPVK ddPTM_A549_MK2206_60min_R1 2 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.5)KFAS(0.5)DDEHDEHDENGATGPVK;T(0.5)KFAS(0.5)DDEHDEHDENGATGPVK 173.53 1.6779e-40 123954000.0 3729.4 3460.5 2662.8 2121.02 3488.7 2736.9 3027.6 2978.8 4112.4 4073.2 5321.1 True False 4358.831544924077 3636.624669009437 3040.4250802235197 2640.6699952162076 2975.516851452946 3026.5169413928165 3577.675730110825 3401.0540221924025 3180.9479661533555 3153.061291039742 3999.7240151110163 1.0897830771464099 0.9092188999216485 0.7601587181357385 0.660213051010449 0.7439305412601968 0.7566814435092498 0.894480648313312 0.8503221745658376 0.7952918636725153 0.7883197138421126 1.0 11.965684740720295 -10.791219036684588 0.7884602636115262 1.013732173099124 0.8198576081414806 0.0 0.12408929012504612 0.8868378534420233 0.8618856928666118 0.11100777984144551 0.021108379357310785 1.617264163758084e-11 10.791219036684588 -0.19387456495764344 T(ph)KFASDDEHDEHDENGATGPVKR ddPTM_A549_MK2206_60min_R1 3 TKFASDDEHDEHDENGATGPVKR 23 2 P05455 P05455 SSB Lupus La protein 1 T(0.5)KFAS(0.5)DDEHDEHDENGATGPVKR;T(0.5)KFAS(0.5)DDEHDEHDENGATGPVKR;T(0.5)KFAS(0.5)DDEHDEHDENGATGPVKR 134.97 6.5025e-23 1231978500.0 2699.67 2977.04 2507.2 2579.25 3972.1 2973.21 2980.76 2777.01 4578.0 4761.9 4591.3 True False 3155.3082954054785 3128.5586200340554 2862.758660483855 3211.166365786932 3387.8093518090527 3287.8331087429306 3522.3255084176058 3170.6596717364478 3541.0903095637727 3686.1834827168173 3451.153496566348 0.9142764291836876 0.9065254915919412 0.8295077756848821 0.9304617627068208 0.9816455150950781 0.952676579588271 1.0206226735270014 0.9187246162452722 1.0260599283940588 1.0681018640243927 1.0 11.752862926447778 -6.901118867088778 1.0986901992713487 1.0048094729637491 0.8837322023031356 0.5758049449736223 0.04229590934417368 0.23729135272520305 0.5603670558049976 0.006059689577935459 0.0167983313552436 1.2556862333428265e-07 6.901118867088778 -0.12107727066061347 T(ph)KFASDDEHDEHDENGATGPVKR ddPTM_A549_PD325901_60min_R1 1 TKFASDDEHDEHDENGATGPVKR 23 2 P05455 P05455 SSB Lupus La protein 1 T(0.553)KFAS(0.447)DDEHDEHDENGATGPVKR 78.45 1.6809e-05 25634000.0 1249.5 1211.8 1274.4 1759.7 1872.1 1942.0 1650.5 1966.6 1674.8 1410.9 1948.9 True False 1376.348320166717 1313.9226388124698 1360.8884475897491 1868.3926724313376 1740.6101543943867 1926.1849958680468 1713.3106806882552 1927.374620232145 1604.4139802738848 1321.8155332143003 1709.19765509499 0.8052598925957603 0.7687365091426173 0.7962147874080231 1.0931402034526545 1.0183785059649235 1.1269527489265116 1.002406407229149 1.1276487622638527 0.9386942320516571 0.7733544036139222 1.0 10.739103527513882 -6.243510117820048 23.14782892385536 1.0049546826886204 0.7879368953992851 0.5214940460440403 0.09375582354785972 147.7309504756974 190728.7942131619 0.009847217182920249 0.025973885070681508 5.708077778273261e-07 6.243510117820048 -0.2170177872893353 T(ph)KGSPRT(ph)SPK ddPTM_A549_PD325901_60min_R1 1 TKGSPRTSPK 10 2 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 2 T(0.532)KGS(0.472)PRT(0.503)S(0.494)PK 48.14 0.015305000000000001 17595000.0 3836.2 4041.3 2856.0 3468.1 3618.3 3779.7 3101.2 3744.0 3091.5 4192.4 4154.1 True False 4225.648199938822 4381.8745339435845 3049.825334523165 3682.3166603734276 3364.163090457354 3748.919376355539 3219.217863041756 3669.32298288882 2961.5750059808424 3927.6911485205374 3643.1720350095434 1.15988159750127 1.2027635510580839 0.8371345918379548 1.0107446546547125 0.9234159293409655 1.029026172887199 0.883630482476879 1.0071780710951819 0.8129111053557713 1.0780965353205585 1.0 11.83097940716387 -5.752035896271427 24.982678597760714 0.9259964145494799 1.181322710724424 0.505283030764266 0.08334187882614895 97.07459911017354 257896.9104180284 0.011007917252036682 0.04150737086783337 1.769962657389351e-06 5.752035896271427 0.25532629617494407 T(ph)KKSYSST(ph)LR ddPTM_A549_MK2206_60min_R1 1 TKKSYSSTLR 10 2 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 2 T(0.837)KKS(0.04)Y(0.047)S(0.046)S(0.05)T(0.981)LR 40.552 0.047303 22347000.0 1900.3 1907.8 2014.6 1949.7 2831.1 2199.4 2213.1 2115.7 2864.6 3353.2 2762.1 True False 2221.0241821256045 2004.898871127354 2300.3005733131677 2427.376587525358 2414.648940335493 2432.1390481564376 2615.1916231695955 2415.606954059511 2215.7726738262077 2595.709791101459 2076.194339918088 1.069757362990032 0.9656605032486761 1.1079408748431137 1.169147098060736 1.1630168206848872 1.1714409395087708 1.2596083000942833 1.1634782484547248 1.0672279714979023 1.2502248663310906 1.0 11.019725776582181 -9.153808760576872 1.9349180932991015 1.0227825666375832 1.1338708609865344 0.0 0.09861133861012288 0.29373286275839045 2.2696806367713664 0.01623973539233032 0.01526697466405619 7.017642488022327e-10 9.153808760576872 0.11108829434895129 T(ph)KKSYSST(ph)LR ddPTM_A549_PD325901_60min_R1 1 TKKSYSSTLR 10 2 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 2 T(0.838)KKS(0.041)Y(0.047)S(0.047)S(0.051)T(0.977)LR 40.552 0.047303 42716000.0 2747.1 2796.8 2900.6 2633.2 3465.2 3158.1 2541.3 2900.9 3544.8 3246.6 3696.1 True False 3025.983569691867 3032.496151370453 3097.4521587247546 2795.846783568903 3221.816306291027 3132.3814806647165 2638.0105621527186 2843.0392737879747 3395.8243833740576 3041.609121931776 3241.503131508335 0.9335124622519854 0.9355215862337831 0.9555604400367953 0.8625155275626528 0.9939266369895045 0.9663360958121789 0.8138232341997462 0.8770743566936037 1.0476079292861622 0.9383329272048105 1.0 11.66244725132102 -8.766766402712381 24.99969234798196 1.0224815263894131 0.9180831497868626 0.24616298477669907 0.05550156396022249 84.0828066116263 394599.1377215085 0.008902402957662876 0.009614071205552086 1.7109353414876823e-09 8.766766402712381 -0.10439837660255058 T(ph)KQFSDASQLDFVK ddPTM_A549_PD325901_60min_R1 1 TKQFSDASQLDFVK 14 1 F5GZI3;Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q8TEW0-11;Q5VWV2;Q8TEW0-5 F5GZI3;Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 T(0.5)KQFS(0.5)DAS(0.001)QLDFVK 88.133 3.0719e-05 2102300.0 3480.8 3423.9 3435.4 3811.1 4807.8 4281.3 3924.9 4206.9 4438.7 4140.2 4943.0 True False 3834.1682535704736 3712.444069178094 3668.546902738408 4046.5029913639087 4470.1167140095795 4246.434512260489 4074.2642172876913 4122.990079250796 4252.156874995039 3878.7870654290473 4335.042336258678 0.8844592408016758 0.8563801183962803 0.8462539966575082 0.9334402475192917 1.0311587217086964 0.9795601018109868 0.9398441586625774 0.9510841554569702 0.9808801264591173 0.8947518304461594 1.0 12.081830367616048 -6.4665474921855335 4.109428738584595 0.9852709882915875 0.8630988229422133 0.5908931387592848 0.036622912268506065 0.06908826292545175 2.3616156964567687 0.0037330285420922988 0.008824062073953382 3.415485986656157e-07 6.4665474921855335 -0.12217216534937425 T(ph)KSCSGVEFSTSGSSNTDTGK ddPTM_A549_PD325901_60min_R1 2 TKSCSGVEFSTSGSSNTDTGK 21 1 A0A0A0MR02;P45880-2;P45880;P45880-1;Q5JSD2;Q5JSD1;A2A3S1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 T(0.323)KS(0.323)CS(0.323)GVEFS(0.014)T(0.014)S(0.003)GSSNTDTGK;T(0.44)KS(0.44)CS(0.118)GVEFS(0.001)TSGSSNTDTGK 76.161 2.2961000000000003e-06 2009000.0 855.94 1109.6 1096.5 882.22 1122.5 951.68 1293.5 1062.2 762.68 878.9 1036.0 True False 942.8343986902756 1203.1098861415392 1170.915083790144 936.7127257330078 1043.6594724147753 943.9298336084983 1342.7248503303588 1041.0135877202194 730.6272118911437 823.4061040059875 908.5785677450925 1.0377026623357395 1.3241671428893744 1.288732890426986 1.0309650249154991 1.1486727834720185 1.0389083202250087 1.477830204230691 1.1457606691117574 0.804143128430172 0.9062574588893443 1.0 9.82746746416283 -8.660183579801567 6.322564611803697 0.9079606328202158 1.195474193679891 0.4636864631427 0.13603744539164164 0.1386623551752399 7.536191748100559 0.023985045850728616 0.027169441895216462 2.1868370347880374e-09 8.660183579801567 0.28751356085967517 T(ph)KSDES(ph)GEEKNGDEDCQR ddPTM_A549_MK2206_60min_R1 1 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 2 T(0.5)KS(0.5)DES(1)GEEKNGDEDCQR 90.193 0.00017136 40403000.0 2373.1 2812.4 2308.9 2031.4 3030.3 1965.6 2073.5 2285.0 3022.9 3725.4 3198.1 True False 2773.6212632754155 2955.539147268356 2636.336738669101 2529.0930911930113 2584.5468842141363 2173.5984873403186 2450.228110181265 2608.9057475190148 2338.2179765793635 2883.8295525973317 2403.923506930248 1.1537893178711258 1.2294647224622 1.0966807933234277 1.0520688715351854 1.0751369071283552 0.9041878749777488 1.0192620951197182 1.0852698681958162 0.9726673789072477 1.199634490982582 1.0 11.231175274751058 -6.239467886599145 1.1691178960534265 0.9937727560290378 1.1993632327814698 0.26314010915944597 0.07975629389321062 0.2283181912276336 0.5411011184192848 0.007355904298228866 0.036767880864308475 5.761454193884126e-07 6.239467886599145 0.20559047675243203 T(ph)KSDTEPQK ddPTM_A549_MK2206_60min_R1 1 TKSDTEPQK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 T(0.551)KS(0.359)DT(0.09)EPQK 61.435 0.0030231 16520000.0 7382.9 5023.2 4129.6 3100.5 2913.3 2205.3 1692.2 1944.1 2382.6 5634.2 5164.7 True False 8628.953025425 5278.8594241780675 4715.2393763298205 3860.1226391867335 2484.7574292251734 2438.663382240334 1999.6508358084093 2219.682128556551 1842.9449042303713 4361.430306878156 3882.162451531425 2.2227181714204343 1.3597729332773483 1.2145909490391793 0.994322800083753 0.6400446813463442 0.6281713897053269 0.515086851921818 0.5717643597528838 0.4747212223186001 1.12345383824875 1.0 11.922644774458915 -4.907087867263526 0.7779742880401106 0.7009098566459461 3.9270694439465257 0.8268213784430066 0.2039523318570172 1.2455878806889895 0.3705589459637506 0.03522815726974267 3.957352794544869 1.2385459762645975e-05 4.907087867263526 3.2261595873005797 up T(ph)KSENGLEFTSSGSANTETTK ddPTM_A549_MK2206_60min_R1 1 TKSENGLEFTSSGSANTETTK 21 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 T(0.585)KS(0.415)ENGLEFTSSGSANTETTK 118.57 4.2952e-15 5333300.0 1109.3 1452.7 994.61 1178.9 1327.0 1083.3 1354.1 1318.2 1768.8 1867.4 2046.7 True False 1296.5227202188769 1526.636225016619 1135.660653838484 1467.7305529228322 1131.80005786627 1197.9340869636587 1600.1224422456958 1505.0588868181908 1368.1696241931843 1445.5530430343742 1538.4479039536404 0.8427472369307777 0.9923223406482164 0.7381859671165738 0.9540333144534355 0.7356765574951672 0.7786640573821844 1.0400888051740709 0.9782969465201625 0.8893181372454277 0.9396178052694949 1.0 10.587259875567696 -7.755098123495694 24.999718149758056 0.9554813793479625 0.842959395733451 0.3706508518095104 0.08287880406491833 148.88458893300063 586958.926367954 0.012924246861100547 0.01891170064895246 1.7575264776090168e-08 7.755098123495694 -0.11252198361451149 T(ph)KSENGLEFTSSGSANTETTK ddPTM_A549_PD325901_60min_R1 1 TKSENGLEFTSSGSANTETTK 21 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 T(0.573)KS(0.419)ENGLEFT(0.008)SSGSANTETTK 144.49 5.099200000000001e-22 10322000.0 6268.8 6390.0 6112.0 7443.7 7145.8 7481.6 6332.2 7536.1 6855.9 7404.2 9616.8 True False 6905.203961153348 6928.5077257069515 6526.797074441732 7903.480443130731 6643.9036596717115 7420.672330116574 6573.175336112793 7385.786573543917 6567.770365034469 6936.697548391327 8433.99456591795 0.8187346941219887 0.8214977697170068 0.7738678301758378 0.9370981189706898 0.7877528978403596 0.8798526335437487 0.779366797635276 0.8757163068838252 0.7787259422213817 0.8224688187994275 1.0 13.042000376740866 -10.86518131963312 1.0086217052369115 1.0043701023747424 0.8262339578505967 0.0 0.07102175358015364 0.2729376564627331 0.4726182728272679 0.03610784159394698 0.007921445819415982 1.364013536742312e-11 10.86518131963312 -0.17813614452414572 T(ph)KSHDDGNIDLESDSFLK ddPTM_A549_PD325901_60min_R1 3 TKSHDDGNIDLESDSFLK 18 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 T(0.553)KS(0.447)HDDGNIDLESDSFLK;T(0.5)KS(0.5)HDDGNIDLESDSFLK;T(0.589)KS(0.411)HDDGNIDLESDSFLK 144.22 5.5505e-17 21780900.0 6298.099999999999 6156.029999999999 6547.4 6530.09 6838.4 5426.48 6583.3 6661.5 5701.6 7076.099999999999 8238.8 True False 6937.47847558383 6674.820252689159 6991.745936714631 6933.438828389583 6358.094375199287 5382.288546023712 6833.831084019984 6528.631156654346 5461.981579848095 6629.313838385221 7225.479830056241 0.9601408679774601 0.9237892028877485 0.9676514364666366 0.9595817843886523 0.8799546223561734 0.7449039610677064 0.9457961609127891 0.9035567616557211 0.7559334062670244 0.9174911555089927 1.0 12.81887768202719 -6.766877390050403 22.417329794185296 0.8773786865465213 0.951780766471596 0.20309942529176828 0.07102018801699503 62.133469388670584 256143.2219977685 0.013800574938128377 0.026682043910572086 1.7104981544985616e-07 6.766877390050403 0.07440207992507475 T(ph)KSKGSLEITESQSADAEPPPPPKPDLSR ddPTM_A549_MK2206_60min_R1 4 TKSKGSLEITESQSADAEPPPPPKPDLSR 29 3 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 T(0.39)KS(0.39)KGS(0.22)LEITESQSADAEPPPPPKPDLSR;T(0.484)KS(0.484)KGS(0.031)LEITESQSADAEPPPPPKPDLSR;T(0.429)KS(0.429)KGS(0.143)LEITESQSADAEPPPPPKPDLSR;T(0.52)KS(0.393)KGS(0.087)LEITESQSADAEPPPPPKPDLSR 222.71 1.2182999999999997e-104 124783000.0 5468.83 5862.7 5573.35 5212.719999999999 7159.799999999999 6296.1 5375.12 5338.71 7969.6 9421.3 8668.699999999999 True False 6391.8348039435705 6161.086388383649 6363.7348358358695 6489.836634007893 6106.602904529706 6962.349122987066 6351.7097273197605 6095.488491613673 6164.498324836055 7293.021786622979 6516.022546051164 0.9809411736638551 0.9455287093991698 0.9766287318469173 0.9959813042606582 0.9371672460265544 1.0684967821675793 0.9747832642428501 0.9354615409223312 0.9460523319662024 1.119244406396766 1.0 12.669775880394752 -4.904939197785917 19.573386678325043 0.9749405092644079 1.4170181303788756 0.0 0.05667687365970573 2143.3411530933713 1014728.208831669 0.004939830642285247 54730.77896591902 1.2446888588414901e-05 4.904939197785917 0.4420776211144677 T(ph)KSKGSLEITESQSADAEPPPPPKPDLSR ddPTM_A549_PD325901_60min_R1 4 TKSKGSLEITESQSADAEPPPPPKPDLSR 29 3 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 T(0.523)KS(0.406)KGS(0.067)LEIT(0.003)ESQSADAEPPPPPKPDLSR;T(0.608)KS(0.369)KGS(0.022)LEITESQSADAEPPPPPKPDLSR;T(0.608)KS(0.369)KGS(0.022)LEITESQSADAEPPPPPKPDLSR;T(0.513)KS(0.411)KGS(0.075)LEIT(0.001)ESQSADAEPPPPPKPDLSR 228.03 6.763899999999997e-105 117067000.0 7812.1 7690.6 9180.4 8331.5 10290.099999999999 9790.3 8752.2 9587.199999999999 10845.300000000001 9379.5 9937.900000000001 True False 8605.17864103594 8338.713852163053 9803.437150229867 8846.117832790642 9567.358874917845 9710.571042763622 9085.269760387611 9395.975774987095 10389.50975654667 8787.276769284517 8715.601301538563 0.9873304598636091 0.9567571488947093 1.124814778815005 1.0149750460968239 1.0977279184660411 1.114159620983284 1.042414567401539 1.0780639740058353 1.192058860553042 1.0082238121348324 1.0 13.089384485997813 -5.754539597247787 24.973610823369643 1.0870144729631626 0.9720437581946391 0.3133226809739881 0.05626287982478318 150.3540934843187 544187.9736890425 0.00960871737808153 0.035619200582573854 1.7597882059800063e-06 5.754539597247787 -0.1149707147685235 T(ph)KSLIAQDHR ddPTM_A549_PD325901_60min_R1 1 TKSLIAQDHR 10 1 O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39;H0YAN8 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 T(0.588)KS(0.412)LIAQDHR 104.18 0.00019823 22160000.0 1085.2 913.53 1033.1 1295.0 1417.2 1053.3 1255.7 1161.7 1182.3 1133.9 1420.7 True False 1195.3687051179843 990.5163791338132 1103.2123785349736 1374.9892088416107 1317.660761074583 1044.7222740205025 1303.4863506454064 1138.5289821639794 1132.612042559001 1062.3053604874156 1245.9629065593167 0.9593934930366053 0.7949806321835774 0.885429552298195 1.1035554923850788 1.0575441324439243 0.8384858558152961 1.046167862448601 0.913774379775067 0.9090254907240135 0.8525979023090944 1.0 10.283045403329377 -10.72768161607445 0.006525928003641285 1.933248397410718 2.0661113779642416e-06 0.0 0.09690223332621359 25090.170225497754 37.21189903367019 5688.16319606383 5338.194477974923 1.872054051634985e-11 10.72768161607445 -1.93324633129934 T(ph)KSLLEEK ddPTM_A549_PD325901_60min_R1 1 TKSLLEEK 8 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.573)KS(0.427)LLEEK 55.426 0.0082731 3769000.0 1513.9 1333.6 1302.7 1517.3 1927.7 1100.8 1486.3 1598.0 1454.1 1792.8 2126.3 True False 1667.5900135257234 1445.9871522696067 1391.1090557714738 1611.02017496168 1792.305002203974 1091.8354497690773 1542.8619598345667 1566.1266363932514 1392.9892337689614 1679.602302038837 1864.7785797262457 0.8942563109935175 0.7754202927845092 0.7459915460717552 0.8639203562699556 0.9611355587681026 0.5855040709065639 0.8273700570182777 0.8398458956039504 0.7469998041126448 0.9006979811433736 1.0 10.864788622437446 -10.85272857556632 1.0074631216220808 1.004452571679858 0.7997856263460162 0.2331852010170936 0.09635024109820342 0.4587156185367869 0.7964165113142363 0.06932419232759728 0.015470856153040089 1.403690706086529e-11 10.85272857556632 -0.20466694533384178 T(ph)KSNSLSEQLAINTSPDAVK ddPTM_A549_MK2206_60min_R1 2 TKSNSLSEQLAINTSPDAVK 20 1 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 T(0.462)KS(0.286)NS(0.179)LS(0.072)EQLAINTSPDAVK;T(0.402)KS(0.28)NS(0.305)LS(0.013)EQLAINTSPDAVK 157.07 3.5854e-33 4186200.0 932.77 1609.0 1708.9 1791.2 2184.3 1919.2 1690.2 2056.5 3017.4 3137.9 3275.9 True False 1090.198771963006 1690.8912274053412 1951.2477165367186 2230.0440804100226 1862.9923635247135 2122.2884701381463 1997.2874616968284 2348.015172767114 2333.9637177976692 2429.0462106338014 2462.403619759482 0.44273764187752956 0.6866832122227391 0.7924158740179682 0.9056371029164767 0.7565747339612355 0.8618767667119671 0.8111129490184537 0.9535460206139801 0.9478396226633398 0.9864533138036328 1.0 11.265851542219444 -4.655279112150771 0.33258245016059 0.9824297773376032 1.2914355639209447e-24 0.8104961487524258 0.06781107625115963 2.9511386153008865 0.16621021564356706 0.021252129587452148 1.26423753759295 2.211672856000711e-05 4.655279112150771 -0.9824297773376032 down T(ph)KSNSLSEQLAINTSPDAVK ddPTM_A549_PD325901_60min_R1 1 TKSNSLSEQLAINTSPDAVK 20 1 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 T(0.472)KS(0.313)NS(0.209)LS(0.007)EQLAINTSPDAVK 154.14 4.832e-27 15965000.0 2090.8 2203.6 2351.8 2247.2 2512.7 2679.1 2645.1 2760.9 2652.2 3090.5 3053.3 True False 2303.0564768343897 2389.3051055348737 2511.4072905222647 2386.004440238507 2336.2166203444144 2657.2822978527734 2745.760727954259 2705.8316836158488 2540.7372572739428 2895.3653025719686 2677.763456463408 0.8600671845287247 0.8922763882551789 0.937874958469687 0.8910437680667153 0.8724507068409681 0.9923513936374033 1.0253933077347528 1.0104819666145983 0.9488281166662721 1.081262534815511 1.0 11.386812808707592 -7.266106006829684 24.96898915122339 0.983322113224577 0.8934630064863727 0.6667704921603836 0.03952670701091366 178.04028652771234 952611.3348766008 0.004659719816325008 0.007599581898817047 5.418686096869096e-08 7.266106006829684 -0.0898591067382043 T(ph)KSPKPAESPQSATK ddPTM_A549_MK2206_60min_R1 2 TKSPKPAESPQSATK 15 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 T(0.5)KS(0.5)PKPAESPQSATK;T(0.5)KS(0.5)PKPAESPQSATK 87.85 1.3294e-05 51466600.0 1262.74 1201.6200000000001 1154.16 1179.1599999999999 2416.1 1397.85 1398.37 1698.96 2270.4 1985.44 2254.5 True False 1475.859640971049 1262.7773254660078 1317.8372429738536 1468.0542529345046 2060.694890588318 1545.769559182266 1652.435728205534 1939.7927828467864 1756.1580250837892 1536.9277250520336 1694.645428965398 0.8708958320986825 0.7451572487567202 0.7776477724773433 0.8662899199101313 1.216003569458419 0.9121492512601751 0.9750923113245975 1.144659968210019 1.0362982102727798 0.9069317385114283 1.0 10.726767734198265 -6.537861112763421 24.781006853115187 1.0279866526646322 0.7975164353957191 0.5699760473386772 0.0900537967910514 94.38737277710578 156117.44890839755 0.010963089555419712 0.02282826226222049 2.898270305429242e-07 6.537861112763421 -0.23047021726891304 T(ph)KSPKPAESPQSATK ddPTM_A549_PD325901_60min_R1 3 TKSPKPAESPQSATK 15 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 T(0.5)KS(0.5)PKPAESPQSATK;T(0.483)KS(0.483)PKPAES(0.033)PQSATK;T(0.555)KS(0.444)PKPAESPQSATK 105.77 1.7231999999999999e-06 151427800.0 3829.32 3465.79 3742.6699999999996 3236.5799999999995 3818.8 3858.95 4041.46 3842.3 3920.17 4278.0199999999995 4503.04 True False 4218.0697474036115 3757.864286491065 3996.6700927030197 3436.496195793497 3550.580662144806 3827.523990630795 4195.259971871772 3765.6623122739634 3755.4188876583935 4007.905087108537 3949.1946271224488 1.0680835323826714 0.9515520609398794 1.0120215563078399 0.870176458813192 0.8990644922283585 0.9691910255179528 1.062307728026212 0.9535266472844832 0.9509328463749965 1.0148664387373754 1.0 11.94734275417351 -7.520706140857414 24.99041489622135 0.9815069474529753 0.9552349929073761 0.05554014308110777 0.05725893153669087 245.72962398228904 2826520.9228686457 0.00872500119511879 0.013066361259674213 3.015045421456301e-08 7.520706140857414 -0.026271954545599163 T(ph)KSPTDDEVTPSAVVR ddPTM_A549_PD325901_60min_R1 1 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 T(0.666)KS(0.316)PT(0.018)DDEVTPSAVVR 179.85 2.2721999999999997e-29 313620000.0 11810.0 12871.0 12329.0 11712.0 13606.0 14374.0 14004.0 13281.0 12495.0 12818.0 14025.0 True False 13008.942505937504 13955.68434077842 13165.72008029977 12435.423640118104 12650.361498151824 14256.94290968451 14536.929883282844 13016.100036257047 11969.87860253296 12008.669292466442 12300.013911800106 1.0576364058789627 1.1346071997032405 1.0703825357196664 1.01100890854994 1.0284835113898212 1.1590997385789141 1.1818628814181045 1.0582183182549052 0.9731597613112918 0.9763134723730548 1.0 13.586372326859792 -8.629414176827877 4.829554834194159 0.9875424983800939 1.0915806907788461 0.4743620041381197 0.049792696020001005 0.14430906911630378 5.61179577277115 0.009048693639849325 0.010261905351460357 2.347393097309489e-09 8.629414176827877 0.10403819239875223 T(ph)KSRIEQGIVDR ddPTM_A549_PD325901_60min_R1 2 TKSRIEQGIVDR 12 2 Q8IWT6 Q8IWT6 LRRC8A Volume-regulated anion channel subunit LRRC8A 1 T(0.5)KS(0.5)RIEQGIVDR;T(0.5)KS(0.5)RIEQGIVDR 135.47 1.2608e-08 40796000.0 3958.8 4932.2 5168.0 5596.8 6137.0 6059.2 5952.9 6258.2 5566.5 5647.299999999999 6185.7 True False 4360.69446168547 5347.853803557405 5518.731557708586 5942.5016247449585 5705.958291500641 6009.855884121361 6179.440867051873 6133.375291537078 5332.559363025189 5290.72851422575 5424.898114383028 0.8038297438479008 0.9857980169947606 1.0172968120962083 1.0954125772407797 1.0518093005972664 1.1078283421005521 1.139088833883963 1.130597324081657 0.982978712335072 0.9752678119794445 1.0 12.405380327057056 -5.2309977566681045 2.3174749208436918 1.0306970369651758 0.73747789597992 0.5790214075837669 0.05935679654362021 0.45534174566162305 2.668957761796337 0.00987734567486732 0.27705497757969944 5.8749238719188175e-06 5.2309977566681045 -0.2932191409852558 T(ph)KSSDDLLAGMAGGVTVTNGVK ddPTM_A549_MK2206_60min_R1 2 TKSSDDLLAGMAGGVTVTNGVK 22 1 Q69YQ0-2;Q69YQ0;F8WAN1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.447)KS(0.447)S(0.106)DDLLAGMAGGVTVTNGVK;T(0.333)KS(0.333)S(0.333)DDLLAGMAGGVTVTNGVK 128.71 3.2568e-22 8087400.0 2686.04 3598.7799999999997 4074.94 3609.33 5698.799999999999 3465.88 3989.2 2848.97 5625.7 5076.5 5863.4 True False 3139.3778846269856 3781.9425303678036 4652.827766413558 4493.616012028981 4860.51406915471 3832.6371211350543 4713.986002958812 3252.820222104705 4351.487932396878 3929.715124217631 4407.3559583924225 0.7123041375065312 0.8580978178461588 1.0556959343285426 1.0195718372763387 1.102818586708294 0.8696000861552838 1.069572334855892 0.7380434557165124 0.9873239133569047 0.8916264448154512 1.0 12.105697704687703 -5.484204131285958 3.439498870981142 0.9854812363176352 0.7223241703040906 0.36288179239995255 0.10078625125792634 0.16583507318198568 3.7303821494995706 0.012349230922628181 0.08327740814564498 3.2794111483236247e-06 5.484204131285958 -0.2631570660135446 T(ph)KSSDDLLAGMAGGVTVTNGVK ddPTM_A549_PD325901_60min_R1 1 TKSSDDLLAGMAGGVTVTNGVK 22 1 Q69YQ0-2;Q69YQ0;F8WAN1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.447)KS(0.447)S(0.107)DDLLAGMAGGVTVTNGVK 200.94 6.208899999999999e-61 8272400.0 2445.2 2732.6 2629.4 2572.7 3688.3 4015.7 3225.0 3597.0 4078.3 3720.9 4057.7 True False 2693.4349039389003 2962.8857920605346 2807.8468958666735 2731.6098359743723 3429.2465319442463 3982.9974706010926 3347.7291397877157 3525.2550132080873 3906.9032336702826 3485.961738987235 3558.628623879595 0.7568743998362307 0.8325920193466029 0.789024984800346 0.7676018277502608 0.963642710265648 1.1192506697309856 0.9407357422247793 0.9906217776006297 1.0978676469507516 0.9795800875638607 1.0 11.797105666668765 -6.884019586017884 4.053911333269877 1.0385933101165479 0.7901565673458123 0.8087688512745691 0.053065348993336876 0.0684291929402617 2.06744612888336 0.008038186139327082 0.015723373308572153 1.306111983147828e-07 6.884019586017884 -0.24843674277073557 T(ph)KSTGGAPTFNVTVTK ddPTM_A549_MK2206_60min_R1 3 TKSTGGAPTFNVTVTK 16 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 T(0.333)KS(0.333)T(0.333)GGAPT(0.001)FNVTVTK;T(0.333)KS(0.333)T(0.333)GGAPT(0.002)FNVTVTK;T(0.449)KS(0.449)T(0.1)GGAPT(0.002)FNVTVTK 107.45 2.8465e-07 11682000.0 8120.5 9821.099999999999 9213.099999999999 8771.6 11405.8 9740.599999999999 9807.4 9384.599999999999 12699.7 11559.6 12460.7 True False 9491.041872836373 10320.952040690243 10519.656116346441 10920.642393772088 9728.021929171902 10771.343826713013 11589.277630958153 10714.895789132142 9823.23822725361 8948.278331509127 9366.364292175273 1.0133112034479863 1.1019165728277769 1.123131215933448 1.165942520823717 1.0386123821063378 1.1500026574571172 1.237329370227455 1.1439759820236164 1.048778151353777 0.9553630472161523 1.0 13.193273435478698 -8.939139061048833 3.244461702370871 1.0198302275913411 1.1244410094263557 0.4330672277868126 0.060773669934683854 0.1838357303217318 3.740745111614733 0.010964343528989248 0.011326727397596098 1.150431961765531e-09 8.939139061048833 0.1046107818350146 T(ph)KSTGGAPTFNVTVTK ddPTM_A549_PD325901_60min_R1 2 TKSTGGAPTFNVTVTK 16 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 T(0.432)KS(0.282)T(0.282)GGAPT(0.005)FNVTVTK;T(0.523)KS(0.301)T(0.176)GGAPTFNVTVTK 146.97 7.2465e-15 11583200.0 8619.4 8859.1 8762.4 8450.2 10661.3 9452.0 10498.4 10936.1 8849.1 9337.9 9107.2 True False 9494.435142733086 9605.687448014156 9357.069156591662 8972.149662203383 9912.487067488319 9375.026045800618 10897.922356944908 10717.970906295523 8477.203100574183 8748.303400384011 7987.0721352974 1.188725352908004 1.2026544001729473 1.1715268120892275 1.1233339965157711 1.2410664257909856 1.1737750563650742 1.3644452150098332 1.34191487503029 1.06136553632848 1.0953079241293553 1.0 12.963451028115395 -8.906980202795356 6.834056112283207 1.026794097077566 1.223104602089722 0.534226393102837 0.07172656673370036 0.10983607517196199 6.833431830946682 0.013053460103228607 0.013833436686333692 1.2388530580480654e-09 8.906980202795356 0.19631050501215608 T(ph)LAPSPK ddPTM_A549_PD325901_60min_R1 1 TLAPSPK 7 0 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 T(0.682)LAPS(0.318)PK 59.205 0.032723 21614000.0 5862.5 5666.7 5534.7 5666.4 6447.1 6207.7 6130.8 6489.0 6945.6 6318.6 6816.4 True False 6457.656684255601 6144.252696285377 5910.318024854821 6016.40065867189 5994.277937287569 6157.146549356374 6364.11094890249 6359.571804477976 6653.700585974627 5919.642517660977 5978.0260127197325 1.080232282448309 1.0278062830793904 0.9886738552624484 1.0064192838690407 1.0027186105469024 1.0299631577807653 1.0645840174267 1.0638247125299238 1.1130263688744795 0.9902336498813271 1.0 12.545453459419832 -7.619505493829349 4.811127007816543 1.0563810201409964 1.0186813428470676 0.061146144494138355 0.03822947868991041 0.3426542931613342 13.543108266934238 0.007015373700629077 0.010501798910862201 2.401565887862096e-08 7.619505493829349 -0.03769967729392887 T(ph)LDSDEERPR ddPTM_A549_MK2206_60min_R1 1 TLDSDEERPR 10 1 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 T(0.576)LDS(0.424)DEERPR 46.592 0.013800999999999999 26987000.0 794.78 663.39 316.42 592.19 902.15 845.39 528.28 693.94 877.18 1043.7 978.1 True False 928.9194334946 697.1537174322126 361.29311397188155 737.2765765844198 769.4449300708783 934.8486086755348 624.2616378329195 792.3081201021208 678.5001305686213 807.9274451188696 735.2107758132875 1.2634736378381188 0.9482365334771158 0.4914143343073562 1.002809807526076 1.0465637275510837 1.2715382301645521 0.8490920677031204 1.0776611907322393 0.9228647795838778 1.0989058807321523 1.0 9.522014101802192 -5.26007479312601 23.722366762614964 0.9595717631930984 1.2634738153058278 0.169633922647471 0.18454041041192248 72.3656398814407 1257725.788888477 0.023688290225343366 0.20402315075225494 5.494462414307591e-06 5.26007479312601 0.30390205211272936 T(ph)LGTPTQPGSTPR ddPTM_A549_PD325901_60min_R1 1 TLGTPTQPGSTPR 13 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 T(0.859)LGT(0.138)PT(0.003)QPGSTPR 113.96 2.1973e-05 27411000.0 11284.0 11419.0 11572.0 11251.0 12171.0 10533.0 10339.0 12148.0 11771.0 12721.0 14291.0 True False 12429.543373158243 12381.319204983989 12357.345508088973 11945.948717125066 11316.150947670585 10447.22274020502 10732.456302717883 11905.698610078356 11276.305804755137 11917.793889020562 12533.297598113044 0.9917217137674589 0.9878740298042603 0.9859612293854283 0.9531369237513033 0.9028869584469368 0.8335573825182213 0.8563154444153399 0.9499254698835863 0.8997078156392653 0.950890521486927 1.0 13.613478427292488 -6.385439088248209 3.512316202579293 0.9318950116345865 0.9886973064482365 0.2988426711931945 0.04539689815124507 0.3695771028822255 8.310594708960505 0.008398738770797436 0.020876982936181794 4.116810833748748e-07 6.385439088248209 0.056802294813649956 T(ph)LKEPNSK ddPTM_A549_MK2206_60min_R1 2 TLKEPNSK 8 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 T(1)LKEPNSK;T(1)LKEPNSK 86.31299999999999 0.0011147 22500000.0 4317.4 7900.8 6620.200000000001 4142.3 7745.7 5645.8 3965.5 5250.9 7501.3 7443.700000000001 8596.7 True False 5046.071569704301 8302.916972954712 7559.043907201344 5157.163685954915 6606.317790666749 6243.234808621268 4685.980019736585 5995.231155206825 5802.267527114616 5762.163000125829 6461.902133150079 0.7808956969214291 1.284902928250813 1.1697861947526007 0.798087556835355 1.0223487843890122 0.9661605329169208 0.7251703791205889 0.9277811752132249 0.8979194372735105 0.8917131335935078 1.0 12.657743185514786 -6.247959263690554 24.913463077416502 0.9307617130464774 1.0991657375095332 0.21483959675226516 0.14067988190101346 845.4788387082398 1562580.2599801398 0.01830865661300908 0.04814835282119977 5.649899677185758e-07 6.247959263690554 0.1684040244630558 T(ph)LKEPNSK ddPTM_A549_PD325901_60min_R1 1 TLKEPNSK 8 1 A0A0C4DH22;Q9H4G0;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22;Q9H4G0-3;Q9H4G0-4 EPB41L1 Band 4.1-like protein 1 1 T(1)LKEPNSK 110.86 0.00061848 24352000.0 4435.7 6038.7 7306.8 6748.3 6643.6 5557.0 6695.7 7795.1 5576.9 7384.0 9035.1 True False 4886.008998610245 6547.602441819492 7802.683387357795 7165.127164498717 6176.976455175765 5511.745634417475 6950.508527527628 7639.620615362347 5342.522287192164 6917.772979838675 7923.839978217837 0.6166213618702033 0.8263168438305746 0.9847098640062023 0.9042493518540536 0.779543311343478 0.6955902251394444 0.8771641712394699 0.9641311076906157 0.6742339953707343 0.8730328980463034 1.0 12.951984029987583 -11.107066637998875 1.4540339764955377 0.9998326158108422 0.8037271665865127 0.10553504715495898 0.11772680048357607 0.45664566184819894 1.7288034407433166 0.08602181785789499 0.018765024372911644 7.81507881082277e-12 11.107066637998875 -0.1961054492243295 T(ph)LMMEQR ddPTM_A549_MK2206_60min_R1 4 TLMMEQR 7 0 A0A0G2JNW7;Q9Y666;A0A0G2JQE3;H0YB78;A0A0U1RR18;Q9UHW9-3;Q9UHW9-4;Q9UHW9;B3KXX3;Q9UHW9-6;Q9UHW9-5;Q9UHW9-2;Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;I3L4N6;Q9UP95-7 A0A0G2JNW7;Q9UHW9-3;Q9UHW9-2;Q9UP95-3 SLC12A7;SLC12A6;SLC12A4 Solute carrier family 12 member 7;Solute carrier family 12 member 6;Solute carrier family 12 member 4 1 T(1)LMMEQR;T(1)LMMEQR;T(1)LMMEQR;T(1)LMMEQR 101.65 0.011536 43867000.0 6932.6900000000005 7003.5 6333.820000000001 6313.939999999999 11479.4 8955.859999999999 7121.08 8696.32 12462.5 9022.130000000001 9224.699999999999 True False 8102.7585840027095 7359.948235632881 7232.050916937555 7860.85558344354 9790.795466669224 9903.563160781268 8414.888059247456 9929.04999136305 9639.763648523052 6984.024566858583 6933.952401231809 1.1685627640829008 1.0614362213281698 1.042991139606437 1.1336760232226382 1.41200788527621 1.4282710044305917 1.2135774190997564 1.431946661416246 1.3902263948063098 1.0072213021851548 1.0 12.759462217721074 -6.53812820312992 24.805192544786333 1.2426104331139707 1.0880894354118982 0.21655115173147943 0.1492816166929386 337.4745242386881 548944.3160537989 0.025926896500799313 0.05398544497936793 2.896488422112709e-07 6.53812820312992 -0.1545209977020725 T(ph)LMMEQR ddPTM_A549_PD325901_60min_R1 3 TLMMEQR 7 0 A0A0G2JNW7;Q9Y666;A0A0G2JQE3;H0YB78;A0A0U1RR18;Q9UHW9-3;Q9UHW9-4;Q9UHW9;B3KXX3;Q9UHW9-6;Q9UHW9-5;Q9UHW9-2;Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;I3L4N6;Q9UP95-7 A0A0G2JNW7;Q9UHW9-3;Q9UHW9-2;Q9UP95-3 SLC12A7;SLC12A6;SLC12A4 Solute carrier family 12 member 7;Solute carrier family 12 member 6;Solute carrier family 12 member 4 1 T(1)LMMEQR;T(1)LMMEQR;T(1)LMMEQR 107.57 0.0097555 47813000.0 7182.6 7227.0 8283.2 8805.8 8475.2 6873.6 7926.7 7804.6 8571.8 9271.3 8655.099999999999 True False 7911.772264449347 7836.044653158702 8845.347762927975 9349.714266577186 7879.931189852745 6817.623680534819 8228.35490615668 7648.931130409747 8211.557055237452 8685.908535750043 7590.577569199365 1.0423149216672667 1.032338393451821 1.1653062869445072 1.2317526803910088 1.038120105883313 0.8981692919125158 1.084022240882598 1.007687631234699 1.0818092536934032 1.144301399539773 1.0 12.889993949554151 -6.961587752279524 24.99682977565811 1.029404003266934 1.1176659578862747 0.20261455380366167 0.07730316507097747 178.3842348243423 116083.10858269605 0.010460975216609958 0.01976934871952861 1.0924768621896544e-07 6.961587752279524 0.08826195461934061 T(ph)LPQLPNEEK ddPTM_A549_MK2206_60min_R1 1 TLPQLPNEEK 10 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 T(1)LPQLPNEEK 107.85 1.9535e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)LPQLPNEEK ddPTM_A549_PD325901_60min_R1 2 TLPQLPNEEK 10 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 T(1)LPQLPNEEK;T(1)LPQLPNEEK 116.01 8.9075e-05 7889000.0 5620.3 6424.5 6121.6 6274.1 6988.7 7007.6 7262.799999999999 6902.799999999999 7632.7 7676.9 8486.8 True False 6190.868718553822 6965.91516178471 6537.048588171226 6661.636907485056 6497.837821706133 6950.532428962371 7539.1898283566525 6765.118238858153 7311.924162429233 7192.179223852047 7442.977402257765 0.8317731445316324 0.9359043814470884 0.8782840837576998 0.8950231268288286 0.8730159277032157 0.9338376369185247 1.0129266046232657 0.9089263440200707 0.9823923636005157 0.9663040521485876 1.0 12.861664140430845 -7.654194475478527 0.524051536311 0.9966279749462592 0.8717754745109978 0.5492925408912612 0.03683512762700502 0.4171191195331995 0.23183710718374834 0.008947662467284859 0.020521582183825784 2.217203341931801e-08 7.654194475478527 -0.12485250043526142 T(ph)LPSPIDAK ddPTM_A549_MK2206_60min_R1 1 TLPSPIDAK 9 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 T(0.553)LPS(0.447)PIDAK 85.821 0.0013169 8695900.0 3644.4 4981.2 3746.3 3480.3 5154.7 4522.5 4348.3 4210.0 6339.4 6643.1 6277.1 True False 4259.485622974557 5234.721803574573 4277.581672690914 4332.9736562366015 4396.450458389801 5001.067948207465 5138.329824693126 4806.780392584269 4903.536021941587 5142.41909616668 4718.322830853271 0.902754172546575 1.1094454515372607 0.9065894441812384 0.9183292054335794 0.9317824608441932 1.0599249198264507 1.0890161629241255 1.018747670496934 1.0392540310885896 1.0898828419582123 1.0 12.204058416791254 -7.258223045036723 24.99559826287765 1.0274458887028284 0.9578370164325284 0.3512426658010738 0.060751197227259204 311.1921506523847 2418414.516636662 0.008472280328288449 0.014299887184316531 5.517939760487602e-08 7.258223045036723 -0.06960887227029999 T(ph)LQRLSSGFDDIDLPSAVK ddPTM_A549_MK2206_60min_R1 1 TLQRLSSGFDDIDLPSAVK 19 1 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 T(0.497)LQRLS(0.434)S(0.068)GFDDIDLPSAVK 90.53399999999999 2.0226e-06 7432600.0 1138.9 1326.7 1105.9 1350.2 1731.6 1187.7 1181.8 1149.5 2067.6 1711.8 2219.3 True False 1331.118476568358 1394.2233632061316 1262.7332492936712 1680.999060612781 1476.88393383665 1313.3816256685463 1396.51776253302 1312.4451451961083 1599.291901278737 1325.103191103268 1668.186560435977 0.7979434124085455 0.8357718472697407 0.7569496597332965 1.0076804959832883 0.8853230021531101 0.7873109979529489 0.8371472326021155 0.7867496216089306 0.9587008666828999 0.794337529464903 1.0 10.704064925222339 -8.874654963471375 5.586840691517819 0.982005855737279 0.8400573193232292 0.025928383004295785 0.08537907946204498 0.12679982466066284 5.71955806922146 0.011378238763526888 0.01205226073576583 1.3345813038586705e-09 8.874654963471375 -0.1419485364140498 T(ph)LRFSLCSDNLEGISEGPSNR ddPTM_A549_PD325901_60min_R1 1 TLRFSLCSDNLEGISEGPSNR 21 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;B4DGD8;A0A0A0MQV8 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 T(0.527)LRFS(0.466)LCS(0.007)DNLEGISEGPSNR 72.569 0.00016772 4134300.0 882.45 944.17 1033.3 1295.6 1197.3 1002.4 686.16 1057.5 1193.0 866.07 1204.8 True False 972.0356743746446 1023.7385194649025 1103.4259517376713 1375.6262694789116 1113.2057784607664 994.2367867446609 712.2721942811593 1036.4073329072983 1142.862358769253 811.386192395569 1056.617237856455 0.919950611771771 0.9688830380448336 1.044300539688503 1.3019154147717917 1.0535563291766012 0.9409621110873182 0.6741061651863036 0.980873012264918 1.0816238064483619 0.7679092894997787 1.0 10.045237136260841 -7.026210877551208 23.332409928469204 0.9981309905475089 1.0671127041093833 0.04494962650418377 0.15240294606929092 898.4497285678921 799782.6075367567 0.021902822835478387 0.038044917622857354 9.414323603258101e-08 7.026210877551208 0.06898171356187444 T(ph)LRSSLEGPTILDIEK ddPTM_A549_MK2206_60min_R1 2 TLRSSLEGPTILDIEK 16 1 Q7L576-2;Q7L576;A0A0G2JR96;A0A0G2JQT1 Q7L576-2 CYFIP1 Cytoplasmic FMR1-interacting protein 1 1 T(0.333)LRS(0.333)S(0.333)LEGPT(0.002)ILDIEK;T(0.333)LRS(0.333)S(0.333)LEGPT(0.001)ILDIEK 72.771 0.00029832 5658000.0 1419.42 1465.02 1535.9299999999998 1379.1399999999999 1984.58 1888.5900000000001 1324.0300000000002 1337.9099999999999 2425.9 1985.88 1841.29 True False 1658.9833945128278 1539.5832603936433 1753.7479696063203 1717.0293619119461 1692.6509109572298 2088.43934025542 1564.5891124780799 1527.5628396775346 1876.4375233662636 1537.2683287464415 1384.046875981236 1.1986468256984955 1.112377974410829 1.2671160204476315 1.2405861331066828 1.2229722420038738 1.5089368550286975 1.1304451746757826 1.1036929934866195 1.355761539533075 1.1107053925876442 1.0 10.434677090787316 -10.979446334534138 1.204795307747562 0.9977506813250119 1.2474204772082818 0.253722969631734 0.11528754351446092 0.40246997528945705 1.023517892468146 0.08425573913739991 0.01865802874673131 1.0484643435834305e-11 10.979446334534138 0.24966979588326987 T(ph)LSADASVNTLPVVVSR ddPTM_A549_MK2206_60min_R1 1 TLSADASVNTLPVVVSR 17 0 Q92615;H0Y4V9;H0Y641 Q92615 LARP4B La-related protein 4B 1 T(0.791)LS(0.208)ADASVNTLPVVVSR 222.09 1.9962999999999997e-63 7532800.0 2642.3 2509.8 2232.3 2414.3 3710.7 2311.0 2236.2 2372.4 4493.3 3300.7 3314.1 True False 3088.255641967314 2637.538099777455 2548.873706843535 3005.8036083820466 3164.8609455345654 2555.5484860823553 2642.4885941583534 2708.6949651702894 3475.5747243256646 2555.069577564291 2491.1175054931164 1.2397069327952053 1.0587770725232628 1.0231848562836001 1.2066085207759192 1.2704583138112875 1.0258642879941084 1.0607643310006258 1.087341307343952 1.3951869860260466 1.0256720415356382 1.0 11.282577359470027 T(ph)LSALRSPDVGLYGVIPECGETYHSDLAEAK ddPTM_A549_PD325901_60min_R1 1 TLSALRSPDVGLYGVIPECGETYHSDLAEAK 31 1 P46940;H0YLE8;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 T(0.328)LS(0.328)ALRS(0.328)PDVGLY(0.014)GVIPECGET(0.001)Y(0.001)HSDLAEAK 47.919 0.0057457 1479500.0 872.99 1030.1 887.71 939.43 947.47 995.71 759.24 1210.1 1035.8 879.73 1040.1 True False 961.6153021387287 1116.910142136264 947.9553388338792 997.4564574996716 880.9229757940549 987.6012678865984 788.1332936720696 1185.9636061949147 992.2689280915272 824.1836976643391 912.1742937371337 1.0542012735296866 1.2244481672031533 1.039226105517787 1.093493276831055 0.9657397515391015 1.0826892126508456 0.8640161195982907 1.3001502172749022 1.0878062831898603 0.9035375183482738 1.0 9.833165703512902 -10.61984393953002 1.117226255637171 1.003759766578443 1.078704864305053 0.12618292922970786 0.11371549441218219 1.0596149084169086 2.5141856968801077 0.05451551711242271 0.01809284025282261 2.399695076561609e-11 10.61984393953002 0.07494509772660995 T(ph)LSASAAEVAPR ddPTM_A549_MK2206_60min_R1 1 TLSASAAEVAPR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 T(0.845)LS(0.155)ASAAEVAPR 148.96 4.7842e-12 9617600.0 1245.5 1792.7 1254.3 1309.7 1666.7 1284.1 864.18 1016.6 1993.8 1677.9 1865.6 True False 1455.7099504485816 1883.9407727592018 1432.178600767748 1630.5765587946673 1421.5306378641396 1419.9826096834056 1021.1903198728933 1160.706163206928 1542.2074834443524 1298.8612246478401 1402.3200320593685 1.0380725634438863 1.343445668384664 1.0212922642661897 1.1627706383114944 1.013699159511085 1.012595254449941 0.7282148842823207 0.8277041878253569 1.0997542987242028 0.9262231123807063 1.0 10.453599917873879 -6.790045620565584 6.6647112153531785 1.0018795905262743 1.1474056629698688 0.2875833553136826 0.13048666513172216 0.22309944058466763 32.34911927522282 0.02005778403426654 0.0388368345606998 1.6216397428849676e-07 6.790045620565584 0.1455260724435945 T(ph)LSDDLDEAAKEFQEK ddPTM_A549_PD325901_60min_R1 1 TLSDDLDEAAKEFQEK 16 1 Q9H0A0-2;Q9H0A0;A0A087WV29 Q9H0A0-2 NAT10 N-acetyltransferase 10 1 T(0.523)LS(0.477)DDLDEAAKEFQEK 64.265 0.0012402000000000001 18530000.0 1661.3 1279.9 1629.5 1387.9 1622.9 1614.5 1508.8 1435.9 1534.7 1977.3 1630.3 True False 1829.9539530155782 1387.7616648094402 1740.0876689795175 1473.627430850403 1508.9131027010578 1601.3520472857683 1566.2182096470399 1407.2598480582417 1470.2018960630112 1852.452940551871 1429.7834353231892 1.2798819092500775 0.9706096955136073 1.2170288352698582 1.0306647807241545 1.0553438132118114 1.1199962230110727 1.0954233843763974 0.9842468539580917 1.0282689390164084 1.2956178500789117 1.0 10.481580927857383 -2.0000000000000275 0.20169607840526135 0.9966881399981359 1.8561680097844202 0.0 0.11618276558795103 38.87520954208299 0.43384056617351896 0.05330144798998703 10.723709562730278 0.009999999999999365 2.0000000000000275 0.8594798697862843 T(ph)LSDES(ph)LCSGR ddPTM_A549_PD325901_60min_R1 2 TLSDESLCSGR 11 0 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 2 T(0.519)LS(0.481)DES(0.999)LCS(0.001)GR;T(0.618)LS(0.382)DES(0.991)LCS(0.009)GR 111.31 0.00010299 11541300.0 2302.25 2855.1 3162.1000000000004 2429.2 2229.2 2317.2 2451.1 2677.0 2080.43 2224.5 2776.7 True False 2535.9727251731274 3095.7092969743203 3376.699121251998 2579.246166886516 2072.6286823225078 2298.32949146521 2544.3779517933845 2623.605134934125 1992.9967619902086 2084.0446903644547 2435.1835029515414 1.0413887586292472 1.2712427187611097 1.3866302548285585 1.059158853433577 0.8511180696692456 0.9438013557005217 1.0448403369641321 1.0773747160138893 0.8184174866389393 0.855806015373588 1.0 11.24981477517227 -6.49934626985569 6.135164473744957 0.9341173095042848 1.2362614433933854 0.5872989600578429 0.10683751021664704 0.09461892973041956 12.518917708477353 0.01609559367006207 0.0364777157402265 3.1670413240002336e-07 6.49934626985569 0.30214413388910055 T(ph)LSDESICSNRR ddPTM_A549_MK2206_60min_R1 1 TLSDESICSNRR 12 1 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 T(0.569)LS(0.431)DESICSNRR 78.40100000000001 0.00061185 9477500.0 1255.2 1438.5 1366.1 1315.0 1636.6 1319.6 1091.3 1335.3 1900.5 1865.9 1925.8 True False 1467.04707330635 1511.7135056697227 1559.8335218917484 1637.1750590325921 1395.8583079909101 1459.2391961204123 1289.575083983996 1524.5828641847445 1470.0397844748686 1444.3918940761698 1447.5707106238924 1.0134545155822223 1.0443106471933141 1.0775525578432514 1.130981061593172 0.9642764237674478 1.0080607361083527 0.8908546397904102 1.0532009614422637 1.0155219179871995 0.9978040336652345 1.0 10.499418107056089 -6.778344013151689 24.998820335975577 0.9996286391241124 1.0657685642277754 0.37440875219394043 0.04658079066587384 215.59837354544607 318829.4633044754 0.006595922171504909 0.012488262761529145 1.6659270763530686e-07 6.778344013151689 0.06613992510366307 T(ph)LSDESIYNSQR ddPTM_A549_PD325901_60min_R1 1 TLSDESIYNSQR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 T(0.49)LS(0.49)DES(0.02)IYNSQR 159.66 6.6346e-14 34517000.0 10608.0 10681.0 8949.9 9630.4 11379.0 12039.0 10440.0 9848.4 10749.0 9914.2 12582.0 True False 11684.916350803143 11581.125354972763 9557.29403412076 10225.247935774709 10579.778295418913 11940.958375517723 10837.299912987204 9651.965936079656 10297.2569106544 9288.215720032042 11034.493763869443 1.058944488152542 1.0495384385365436 0.8661289080079486 0.9266621699724485 0.9587914517710439 1.0821482734999899 0.9821293250871267 0.8747085405660714 0.9331879768124027 0.841743710114252 1.0 13.429732823294023 -8.026495688811748 24.971539476583896 0.9590082661494251 0.9871683339958868 0.0947160007946094 0.07409100702906797 2338.703187124235 2204165.329894646 0.011302042147718199 0.014615807677593256 9.40815169347455e-09 8.026495688811748 0.028160067846461634 T(ph)LSDESLCSGRR ddPTM_A549_MK2206_60min_R1 1 TLSDESLCSGRR 12 1 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.71)LS(0.29)DES(0.001)LCSGRR 132.86 3.4078e-08 12287000.0 1069.8 869.47 1153.4 836.41 1318.4 854.3 742.06 644.79 1605.7 1596.9 1617.1 True False 1250.3560859011582 913.7223091933643 1316.969463545819 1041.3304875478714 1124.4651064739198 944.7014589615559 876.8826966197776 736.1909570865586 1242.0115137760054 1236.1591809047832 1215.529440310466 1.028651420883559 0.7517072634291644 1.0834533659747834 0.8566888246506794 0.9250825765163805 0.7771934003673854 0.721399801222262 0.6056545671970919 1.0217864517199808 1.0169718148406575 1.0 10.247369120748228 T(ph)LSFDTSK ddPTM_A549_MK2206_60min_R1 2 TLSFDTSK 8 0 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 T(0.685)LS(0.315)FDT(0.001)SK;T(0.905)LS(0.095)FDTSK 140.45 4.2276999999999993e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)LSFDTSK ddPTM_A549_PD325901_60min_R1 1 TLSFDTSK 8 0 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 T(0.585)LS(0.413)FDT(0.001)SK 126.31 0.0011432 16836000.0 5905.4 6401.0 6702.1 7081.3 8173.8 6728.0 6019.3 7872.3 7991.7 7089.1 8071.9 True False 6504.9118606742895 6940.434734311455 7156.9448090013 7518.6958182008475 7599.700486079184 6673.209398661288 6248.367755387349 7715.280800800123 7655.836640885366 6641.493016166623 7079.107471989971 0.9188886997990056 0.9804109856747896 1.0109953602653032 1.062096577562949 1.0735393573482326 0.9426625355054 0.8826490881951398 1.0898663187876876 1.0814691924338413 0.9381822556650166 1.0 12.789351762639404 T(ph)LSGSRPPLLR ddPTM_A549_MK2206_60min_R1 1 TLSGSRPPLLR 11 1 O00418;H3BRH4 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 T(0.366)LS(0.317)GS(0.317)RPPLLR 50.563 0.010399 4577900.0 261.55 455.64 245.88 258.66 466.63 542.51 487.55 705.52 720.16 698.41 808.93 True False 305.6932457164405 478.8301298042072 280.74948126985095 322.03171161168876 397.9893451410234 599.9180481110072 576.1315240505793 805.5296205643831 557.0449098592067 540.638695933189 608.0503556677664 0.5027433054960151 0.7874843347116401 0.4617207746906575 0.5296135568542355 0.654533529059362 0.9866256018420905 0.9475062693086765 1.3247745241095092 0.9161164115222905 0.8891347417097628 1.0 9.248046995127662 -7.206294575419012 3.5958470581450666 0.9914928106083256 0.5793268876221603 0.7153927650069964 0.13332086961439873 0.10438830439717357 2.744039100397458 0.019449909265814216 0.03424735304129873 6.218783313584278e-08 7.206294575419012 -0.4121659229861653 down T(ph)LSKEEETKK ddPTM_A549_MK2206_60min_R1 1 TLSKEEETKK 10 2 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 T(0.5)LS(0.5)KEEETKK 95.631 0.00019111 43745000.0 12767.0 11570.0 10224.0 8658.2 13810.0 9648.2 8776.2 9566.4 13419.0 14568.0 13075.0 True False 14921.75747681818 12158.863580534377 11673.916937135824 10779.459388681373 11778.567293996382 10669.166120043174 10370.72193902716 10922.466495871293 10379.617925739685 11277.078682084584 9828.116648357764 1.5182723212093279 1.2371509227626099 1.1878081381020733 1.0967980717325505 1.198456196179207 1.0855758536225704 1.0552094882553174 1.1113488867367474 1.0561146450651941 1.1474302845163051 1.0 13.26269926558241 -2.0000000000000004 0.39865349486321616 1.0316361624903498 8.218947523529035 0.8078041980268804 0.058460321414313746 13.738364489167768 0.16007070362436415 0.010784279616262011 78.44883834229445 0.00999999999999999 2.0000000000000004 7.187311361038685 T(ph)LSKSEHSLFQAK ddPTM_A549_PD325901_60min_R1 1 TLSKSEHSLFQAK 13 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 T(0.274)LS(0.274)KS(0.179)EHS(0.274)LFQAK 93.51 9.866200000000001e-05 9423800.0 2033.5 2384.7 2677.4 2984.1 2820.1 3378.7 3136.7 3522.0 4032.3 3158.1 3397.0 True False 2239.9394230164207 2585.6670381053773 2859.104464514121 3168.421079617181 2622.025904816843 3351.184987404416 3256.068834968099 3451.7509470444497 3862.83645370097 2958.697027035281 2979.190535357216 0.7518617545379129 0.8679092550202889 0.9596917117526031 1.0635174360330988 0.8801135320814426 1.1248642702211715 1.092937425896355 1.158620405804482 1.296606043774841 0.9931211152564037 1.0 11.540704679355475 -5.823781240877416 0.5692799381792606 1.140558481576333 0.6597112076072934 0.5404848200263905 0.09870189062573115 1.372157680677295 0.4316881029417075 0.02252770143881588 0.38250598685864007 1.5004404342782387e-06 5.823781240877416 -0.4808472739690396 T(ph)LSLVK ddPTM_A549_MK2206_60min_R1 1 TLSLVK 6 0 F8VRW9;F8W0R1;F8VR88;F8VUZ2;F8VPA6;Q96RQ1;A0A087WU02 F8VRW9 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 1 T(0.995)LS(0.005)LVK 98.29899999999999 0.036254 40086000.0 2079.5 2399.8 2402.4 2056.6 2958.8 2962.3 2299.6 2621.4 3448.3 2569.8 2903.6 True False 2430.468761106242 2521.939569625445 2743.0964446180637 2560.4670923242807 2523.5644394986607 3275.768619784405 2717.4075534954586 2992.991477700806 2667.2655558035744 1989.2803951963886 2182.5559847167588 1.1135882782047655 1.1554982265221159 1.2568275287444914 1.1731507050695724 1.1562427067941428 1.5008864114931366 1.245057433817951 1.3713240341412005 1.2220834537491687 0.9114453004304252 1.0 11.091802945544213 -10.303484095885649 0.8812920377867657 1.0111343140308164 1.2459765925586033 0.4862503301814485 0.11023358934523832 0.41218807967356974 0.617160647302575 0.05493861009745842 0.02063807647504696 4.9718258050465417e-11 10.303484095885649 0.23484227852778683 T(ph)LSLVK ddPTM_A549_PD325901_60min_R1 1 TLSLVK 6 0 F8VRW9;F8W0R1;F8VR88;F8VUZ2;F8VPA6;Q96RQ1;A0A087WU02 F8VRW9 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 1 T(0.954)LS(0.046)LVK 75.109 0.048734 71353000.0 1452.2 1345.8 1699.5 1355.8 1369.1 1190.5 1616.3 1535.3 1669.8 1392.4 1943.7 True False 1599.626274946864 1459.2152890855104 1814.8382899237113 1439.5446867547917 1272.9391391385916 1180.804962709017 1677.809180973298 1504.677237080449 1599.624112885917 1304.483626371529 1704.6372221294753 0.9383968941782058 0.8560268836923685 1.0646478126627847 0.8444874182416812 0.7467507588203456 0.6927016184909572 0.9842617298226874 0.8826964573733576 0.9383956258374005 0.7652558617380979 1.0 10.735249024777827 -9.04826240262192 0.9858742874570716 0.9837024655437793 0.8697425676211943 0.0 0.11708753361888881 0.5867652829821236 1.1816321998554107 0.024647797440759348 0.022464374408379423 8.948239456487753e-10 9.04826240262192 -0.11395989792258499 T(ph)LSNAEDYLDDEDSD ddPTM_A549_MK2206_60min_R1 1 TLSNAEDYLDDEDSD 15 0 Q92882 Q92882 OSTF1 Osteoclast-stimulating factor 1 1 T(0.5)LS(0.5)NAEDYLDDEDSD 91.20700000000001 3.1927e-05 711190.0 301.06 250.56 173.25 209.31 329.52 300.41 261.28 125.48 297.8 282.54 418.66 True False 351.87156778968296 263.3124337717106 197.81945514072584 260.5909593962831 281.0480445125046 332.1991868039809 308.7511939368993 143.26717426638342 230.34877548887962 218.71401776744776 314.6951675718137 1.1181346396410283 0.8367222026427287 0.6286065867077011 0.8280742326200989 0.8930802677431301 1.0556221417927327 0.981111964061037 0.45525698844323603 0.7319743015637945 0.6950027846154867 1.0 8.29781121469734 -5.260337206166 22.598258882934513 0.8445736298403484 1.1181349569739134 0.18714466095528048 0.17143447702965572 35.35910239223495 724558.7835761361 0.024600345366118957 0.20790706441707021 5.491143507116284e-06 5.260337206166 0.27356132713356496 T(ph)LSNAEDYLDDEDSD ddPTM_A549_PD325901_60min_R1 1 TLSNAEDYLDDEDSD 15 0 Q92882 Q92882 OSTF1 Osteoclast-stimulating factor 1 1 T(0.5)LS(0.5)NAEDYLDDEDSD 46.746 0.03197 695980.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 139.95 225.4 236.03 225.88 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 137.15858746134893 215.92722184961417 221.12702551886824 198.0981919712948 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.6923767758628698 1.0900009722496755 1.1162495897535016 1.0 7.63007190268284 -8.406651199297297 2.767519773044916 1.0416373897314861 2.1242549172852185e-20 0.9929389581944105 0.0403132841214542 0.01579275512975509 0.23504849953892804 0.00750713997953822 0.009133305847962419 3.920566283493684e-09 8.406651199297297 -1.0416373897314861 T(ph)LSPGK ddPTM_A549_MK2206_60min_R1 1 TLSPGK 6 0 Q9H307;C9JLG1;Q8NFU7;B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626;F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 Q9H307;B4DTR1;F5H212 PNN;HIVEP1;TET1;ERBB2 Pinin;Methylcytosine dioxygenase TET1;Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2;Zinc finger protein 40 1 T(0.845)LS(0.155)PGK 66.07300000000001 0.059864999999999995 16338000.0 7648.4 8267.1 5789.1 6019.2 9001.3 6980.5 6125.5 7973.6 8957.3 8964.4 8716.3 True False 8939.262934573211 8687.860078360904 6610.081430044306 7493.904270212152 7677.22069395001 7719.171876719117 7238.424060243708 9103.882218125871 6928.4858518688425 6939.33581395381 6551.802152357997 1.3643975698130575 1.326026011825485 1.0088951522544578 1.1437928215697253 1.171772363606397 1.1781753626276676 1.1047989380507461 1.3895233718022726 1.0574931432224761 1.0591491703479385 1.0 12.677676076604133 -2.0000000752261644 0.031143053733533432 0.23793748561806327 2.528355935044772 0.24410225841382271 0.11568053291650097 791.4725334996081 1.8370832951269813 41.902775132848824 107.62559349253144 0.009999998267853702 2.0000000752261644 2.290418449426709 T(ph)LSPGK ddPTM_A549_PD325901_60min_R1 2 TLSPGK 6 0 Q9H307;C9JLG1;Q8NFU7;B4DTR1;P04626-3;P04626-2;P04626-5;P04626-4;P04626;F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 Q9H307;B4DTR1;F5H212 PNN;HIVEP1;TET1;ERBB2 Pinin;Methylcytosine dioxygenase TET1;Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-2;Zinc finger protein 40 1 T(0.652)LS(0.348)PGK;T(0.638)LS(0.362)PGK 74.335 0.049216 61280000.0 21296.7 21854.9 21846.0 21413.0 25634.0 20533.0 20191.0 21088.2 25836.0 27609.0 29079.0 True False 23458.725306198085 23696.68912277822 23328.600930669865 22735.632377548576 23833.55627249918 20365.786055694454 20959.379553939147 20667.57930762714 24750.20276711016 25865.763028218596 25502.46734696865 0.9198610074482266 0.9291920189673306 0.9147585844646839 0.8915071654920106 0.9345588388855306 0.7985810070300995 0.8218569312835717 0.8104148914863248 0.9705022824017886 1.0142455110835826 1.0 14.63834921318395 -8.899584578021665 7.221710225759215 0.9870822667891864 0.8785364429017198 0.5555420163224893 0.046779676513391724 0.1377396881539605 8.716178460650998 0.008796608073594869 0.009332357249199381 1.2601302060433598e-09 8.899584578021665 -0.10854582388746659 T(ph)LSPTPASATAPTSQGIPTSDEESTPKK ddPTM_A549_PD325901_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 T(0.351)LS(0.297)PT(0.351)PASATAPTSQGIPTSDEESTPKK 148.02 7.120899999999999e-36 7931600.0 958.71 886.37 1243.6 1046.5 1303.8 1111.6 959.74 1284.8 855.45 1368.3 1131.4 True False 1056.0375334350006 961.0675106157861 1327.9981743743033 1111.1399282260577 1212.2255858658207 1102.5474981498053 996.2634308898794 1259.1736560938984 819.4984114075088 1281.9053044844607 992.2449725355181 1.0642911404594686 0.9685788663256584 1.3383773273053965 1.1198241956184702 1.2216999021604298 1.1111646102196189 1.004049865169982 1.2690149015079293 0.8259033142928566 1.2919242122323518 1.0 9.954552537232686 -8.7682337630408 24.999355788215514 0.9177876753086917 1.1351565754701598 0.0 0.15743859957300063 109.65525860169265 403466.1475324807 0.019927195208980755 0.021444996018458184 1.7051643214039236e-09 8.7682337630408 0.21736890016146815 T(ph)LSSPSLQTDGIAATPVPPPPPPK ddPTM_A549_MK2206_60min_R1 2 TLSSPSLQTDGIAATPVPPPPPPK 24 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.26)LS(0.255)S(0.228)PS(0.228)LQT(0.027)DGIAATPVPPPPPPK;T(0.488)LS(0.41)S(0.084)PS(0.018)LQTDGIAATPVPPPPPPK 110.01 3.3557e-11 11815100.0 1814.4299999999998 2352.66 1666.98 1330.79 2781.4 1943.69 1706.4299999999998 1808.85 2672.44 2353.4 2865.0 True False 2120.6614254455394 2472.4003449766615 1903.382830190401 1656.8336097414328 2372.2597444983 2149.3699856829994 2016.4662426123064 2065.2600268707956 2067.1366070097442 1821.7653054927157 2153.5414300225625 0.9847321235065913 1.1480625868204255 0.8838385013890628 0.7693530231847335 1.1015621577679358 0.9980629839382661 0.9363489434197604 0.9590064059502018 0.959877798584115 0.8459392886969578 1.0 11.072495363205013 -10.895351665405961 1.178967563014501 0.9997961661085942 0.9702830127070786 0.0 0.10544415366332732 2.7167707759513586 6.779486676268084 0.0639326065181949 0.01573233655710893 1.2724722926325942e-11 10.895351665405961 -0.029513153401515613 T(ph)LSSPSLQTDGIAATPVPPPPPPK ddPTM_A549_PD325901_60min_R1 1 TLSSPSLQTDGIAATPVPPPPPPK 24 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.26)LS(0.238)S(0.238)PS(0.26)LQT(0.004)DGIAAT(0.001)PVPPPPPPK 61.89 0.00036141 9770200.0 1394.8 1022.5 1439.7 1188.0 1301.9 1650.9 1458.4 1149.9 1036.8 1589.5 1183.9 True False 1536.39906920251 1108.6696634640618 1537.4066996193992 1261.3800618562425 1210.459035311176 1637.4556177541513 1513.900210067102 1126.9643424209012 993.2269015691215 1489.1386987342332 1038.2878053604381 1.4797429588120359 1.0677864631947507 1.4807134319425947 1.2148655270186464 1.1658222595525614 1.5770729553986373 1.4580737655312794 1.0854065092574976 0.9566007579414131 1.4342253574068355 1.0 10.019990687715955 -8.438317159088152 4.565838740863795 0.9809206115213591 1.3389402595346145 0.1341408652515127 0.19933266172694483 0.11795924267751533 4.373283207485764 0.02323452558143239 0.02799890689018155 3.64487669543002e-09 8.438317159088152 0.35801964801325536 T(ph)LSSPSNRPSGETSVPPPPAAPPFLPVGR ddPTM_A549_MK2206_60min_R1 2 TLSSPSNRPSGETSVPPPPAAPPFLPVGR 29 1 H3BUF6 H3BUF6 ATXN2L 1 T(0.36)LS(0.324)S(0.291)PS(0.017)NRPS(0.004)GET(0.002)S(0.002)VPPPPAAPPFLPVGR;T(0.29)LS(0.272)S(0.255)PS(0.04)NRPS(0.048)GET(0.048)S(0.048)VPPPPAAPPFLPVGR 68.733 0.0001473 14075500.0 1509.1399999999999 1893.1 1448.21 1533.48 2321.1 2047.1799999999998 1795.4699999999998 1633.29 2305.8999999999996 1931.8600000000001 2030.21 True False 1763.8459370694286 1989.4507039161301 1653.5879545705664 1909.1826688405329 1979.669264742578 2263.8112287918966 2121.683658059877 1864.8138592408447 1783.6173317656403 1495.4514842649598 1526.0528260544872 1.1558223325923391 1.303657822291597 1.083571896292616 1.2510593580017826 1.297248188885366 1.483442244030855 1.3903081347094357 1.2219851288255876 1.1687782371053759 0.9799473902429412 1.0 10.575589188228857 -9.494000543657455 0.9151217039312362 1.0314228769765106 1.2772864896169784 0.5070499365535988 0.10437040350293171 0.3208880996398217 0.5688093905217394 0.03373931328189129 0.023616557759227202 3.2062653108437635e-10 9.494000543657455 0.24586361264046785 T(ph)LTGKTITLEVEPSDTIENVK ddPTM_A549_PD325901_60min_R1 1 TLTGKTITLEVEPSDTIENVK 21 1 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 1 T(0.348)LT(0.309)GKT(0.309)IT(0.033)LEVEPSDTIENVK 83.881 2.8623e-05 10068000.0 1772.9 1307.2 967.97 1574.5 1773.1 1481.3 1568.3 1550.6 1731.8 1934.1 1847.9 True False 1952.8835028600015 1417.3623316187993 1033.6622650764673 1671.7532890510545 1648.563572862929 1469.2367839234503 1627.9825147066886 1519.6720665778325 1659.018468496724 1811.9805959244281 1620.6200148032385 1.2050224512975076 0.8745802956104322 0.6378190171876691 1.0315516739153836 1.0172425107702272 0.906589311808439 1.0045430143008223 0.9377102915530374 1.0236936810250041 1.1180786238434943 1.0 10.66233014786656 -7.859231241319895 0.7903482820007836 1.0100865555415603 0.9265127107013722 0.061003483719478724 0.1345209825204249 1.3603982057964954 1.7145679989038667 0.026241084622192195 0.04510494951584982 1.3828298912469527e-08 7.859231241319895 -0.08357384484018815 T(ph)LTPISGGQR ddPTM_A549_PD325901_60min_R1 2 TLTPISGGQR 10 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 T(0.84)LT(0.158)PIS(0.002)GGQR;T(0.855)LT(0.119)PIS(0.026)GGQR 68.436 0.020529 10511000.0 7893.0 7517.5 7585.3 7469.7 8831.7 8236.2 8327.0 7822.4 8555.1 9953.7 9063.1 True False 8694.291549480511 8151.026107668546 8100.0840721143495 7931.086404080443 8211.391859710975 8169.127117903412 8643.88854170924 7666.376095445913 8195.55889816164 9325.221683290934 7948.396155724465 1.0938422518382969 1.025493187301459 1.0190840911069383 0.9978222334034577 1.0330878958262668 1.0277705033637479 1.0875009715619017 0.964518620517494 1.031095926473062 1.1732205467105303 1.0 12.956448064352843 -4.809894192311954 0.004489065449999118 4.491961788160868e-07 2.0864965043698565 0.0 0.0605322669820073 42667.413579344524 24.852474459655173 5552.254578415255 6006.55591120951 1.5491940049416504e-05 4.809894192311954 2.0864960551736775 T(ph)LTPPLRR ddPTM_A549_MK2206_60min_R1 2 TLTPPLRR 8 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.561)LT(0.439)PPLRR;T(0.756)LT(0.244)PPLRR 65.347 0.0055533 4784200.0 417.22 614.57 512.99 475.86 833.52 673.23 531.48 545.81 673.33 900.46 881.12 True False 487.6365359503473 645.8489879592918 585.7396957728195 592.4457213621672 710.9103121572673 744.470751746094 628.0430364114483 623.1802389730209 520.8218300870633 697.0454606033694 662.313586325124 0.7362623174560257 0.9751407811861648 0.8843842371146603 0.8945093888974531 1.073374194392998 1.1240457196066636 0.9482563084598228 0.9409141709303652 0.786367426005657 1.052440226193995 1.0 9.371370642936899 -5.252832033830276 23.719945937818675 0.9303433142009947 0.7362621106086814 0.24941279288988527 0.09737601251813151 677.5589273942335 1867114.2954628537 0.015155741114484844 0.23519225711865097 5.586862284315496e-06 5.252832033830276 -0.1940812035923133 T(ph)LTPPLRR ddPTM_A549_PD325901_60min_R1 3 TLTPPLRR 8 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.65)LT(0.35)PPLRR;T(0.743)LT(0.257)PPLRR;T(0.547)LT(0.453)PPLRR 77.67699999999999 0.0027308000000000002 19785300.0 1739.75 1735.72 1753.29 1867.48 2377.7 1928.73 1921.4699999999998 2315.83 1886.51 2180.26 2439.71 True False 1916.3681392637423 1881.9952159098689 1872.278802789259 1982.8299982451974 2210.698554619698 1913.0230623483928 1994.5925923187294 2269.6389539165098 1807.2265452152424 2042.5980115145012 2139.641136595924 0.8956493247800427 0.8795845171046026 0.8750433756232474 0.9267114771404115 1.0332099700311537 0.8940859425576054 0.9322089383138519 1.0607568321141025 0.8446400259860686 0.9546451395883078 1.0 11.063153130882807 -6.350551607441421 5.2582797846727365 0.9407248416151857 0.8832433991785615 0.20188363598291303 0.059129979834516316 0.3813475864888346 17.131046130524687 0.009948084390097551 0.023638538292103183 4.4611660916008844e-07 6.350551607441421 -0.05748144243662412 T(ph)LYRQSLPPLAK ddPTM_A549_MK2206_60min_R1 1 TLYRQSLPPLAK 12 1 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;F5GYP8 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 T(0.52)LY(0.012)RQS(0.468)LPPLAK 47.201 0.014228999999999999 6297500.0 1281.9 1531.8 1385.0 1308.2 1882.5 1610.9 1201.8 1414.3 2048.0 1735.1 1684.7 True False 1498.2533805540234 1609.762077153201 1581.413826088919 1628.7090587273306 1605.58674373267 1781.3643687711224 1420.1515036488277 1614.7813561120981 1584.1312699839682 1343.139704920714 1266.342494645379 1.183134410232034 1.27119012744178 1.2488042001084163 1.2861520999367766 1.2678929677569506 1.406700301303533 1.1214592494951539 1.275153730479758 1.2509500997418406 1.0606448970954268 1.0 10.30645193311021 -10.630169804335766 0.580603089177765 0.9648012695976091 1.2652817262487515 0.6175945483386376 0.06815850279459551 0.4903810694220278 0.244402409387766 0.07756644856169206 0.013880230820204785 2.343312426958971e-11 10.630169804335766 0.3004804566511423 T(ph)MDASER ddPTM_A549_PD325901_60min_R1 1 TMDASER 7 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 T(0.99)MDAS(0.01)ER 48.048 0.027389999999999998 22650000.0 1098.1 890.76 691.67 695.29 985.75 1054.0 743.56 891.57 904.67 953.16 1123.0 True False 1209.578303621505 965.8274713224923 738.6108855495936 738.23648418184 916.5143206528857 1045.416573452586 771.8565826916447 873.7869369268651 866.6498659746695 892.977314932697 984.8781192835314 1.2281502451302666 0.9806568471894798 0.7499515636380574 0.7495714136881062 0.9305865392964783 1.0614679654098664 0.7837077173093729 0.8872031166277897 0.8799564626383727 0.9066881449070171 1.0 9.943801388876876 -10.846660487288313 1.112727919916219 0.9995935929025301 0.90696097766943 0.0 0.13706268741957361 1.298002904389579 2.8726289310286424 0.09183484206493259 0.02286641001314636 1.4234411372157913e-11 10.846660487288313 -0.09263261523310018 T(ph)MIISPERLDPFADGGKT(ph)PDPK ddPTM_A549_PD325901_60min_R1 1 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 T(0.503)MIIS(0.503)PERLDPFADGGKT(0.995)PDPK 46.785 0.034219 22814000.0 4988.9 4819.8 5075.7 4679.4 6442.0 4809.0 5070.3 5784.0 5632.4 5306.3 5605.1 True False 5495.3694553659325 5225.981461089571 5420.167524663597 4968.435910311529 5989.536143693521 4769.837098418866 5263.253041074619 5668.633582539776 5395.689815198608 4971.259312421174 4915.708233656387 1.117920184469204 1.0631187232205597 1.1026218943494912 1.0107263641674524 1.218448259944509 0.9703255099155834 1.0707008615846434 1.1531672168271367 1.097642406491079 1.0113007274077914 1.0 12.263183573369266 -10.663042949514418 0.9374661019142809 1.0001026125715688 1.0881614794697254 0.20698173405173736 0.06281306815805501 0.6664897126992795 1.0457734185989647 0.039016513669721066 0.0104665345939283 2.1724863203969976e-11 10.663042949514418 0.08805886689815656 T(ph)MIISPERLDPFADGGKTPDPK ddPTM_A549_MK2206_60min_R1 5 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.5)MIIS(0.5)PERLDPFADGGKTPDPK;T(0.5)MIIS(0.5)PERLDPFADGGKTPDPK;T(0.575)MIIS(0.425)PERLDPFADGGKTPDPK;T(0.5)MIIS(0.5)PERLDPFADGGKTPDPK;T(0.521)MIIS(0.478)PERLDPFADGGKT(0.001)PDPK 67.33 0.00041376 30268940.0 4727.88 5572.620000000001 5986.78 4868.92 7171.4400000000005 5393.76 4763.07 5475.26 8655.7 7685.0599999999995 8769.8 True False 5525.830558431825 5856.242555415513 6835.795426536183 6061.805618574124 6116.530675949125 5964.524103111881 5628.4581648232825 6251.394872280507 6695.197770312613 5948.99960849403 6592.016625833115 0.8382610166328969 0.8883840693704845 1.0369809141178037 0.9195677078268927 0.927869424961607 0.904810233599505 0.8538294856184384 0.9483281410095717 1.0156524399642968 0.902455188778014 1.0 12.686504165832602 -8.613100480497021 4.386450206891641 1.0072161633248278 0.914023889667798 0.11600669196274571 0.05772931613092447 0.15168705221145595 5.363167167304526 0.008364184243770098 0.009508801561891092 2.437246859768388e-09 8.613100480497021 -0.09319227365702976 T(ph)MIISPERLDPFADGGKTPDPK ddPTM_A549_PD325901_60min_R1 3 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.59)MIIS(0.41)PERLDPFADGGKTPDPK;T(0.553)MIIS(0.447)PERLDPFADGGKTPDPK;T(0.554)MIIS(0.446)PERLDPFADGGKTPDPK 69.152 0.00022080000000000003 37428000.0 6958.400000000001 7876.7 8475.0 8193.699999999999 10250.100000000002 9532.800000000001 8983.7 10365.7 9784.800000000001 10535.1 9650.6 True False 7664.81164549666 8540.497152281056 9050.164464315074 8699.80623975714 9530.16833692533 9455.168037389767 9325.579619569273 10158.947981765665 9373.578883558583 9869.911988068583 8463.637380193808 0.9056167344117884 1.0090811749883226 1.069299647158068 1.027903943535672 1.126013309505363 1.1171518358662542 1.1018406390368922 1.2003052027653194 1.107511872554249 1.1661548746364856 1.0 13.047062101976621 -5.160099584732707 1.3413372110454898 1.0751453554173729 0.8012240559239131 0.4672216926571048 0.058672832032122015 1.3486236134214582 1.7615869459171738 0.009415232291218352 0.5328651660814775 6.91672350658242e-06 5.160099584732707 -0.2739212994934598 T(ph)MPAPAPR ddPTM_A549_PD325901_60min_R1 2 TMPAPAPR 8 0 X6RBZ7;A0A0C4DGC7;Q9NZ71-9;Q9NZ71-8;Q9NZ71-4;Q9NZ71;Q9NZ71-7;Q9NZ71-6;Q9NZ71-2 X6RBZ7 RTEL1 Regulator of telomere elongation helicase 1 1 T(1)MPAPAPR;T(1)MPAPAPR 71.37899999999999 0.0029062 52247000.0 308.69 303.195 86.044 107.42 135.05 230.18 306.0 116.47 96.182 312.35 273.90999999999997 True False 340.0279815544328 328.746306712945 91.88346326460483 114.0550894314794 125.56455389720747 228.30549039593575 317.6449974496249 114.14691448105256 92.13980502191475 292.6281676940154 240.2208064585502 1.415480975887508 1.3685172053140608 0.3824958571207661 0.47479271722101835 0.5227047388123455 0.9503984844682036 1.3223042671969139 0.475174969911478 0.383562966007332 1.2181632890509344 1.0 7.9082173036599475 T(ph)MSSDDEDCSAK ddPTM_A549_PD325901_60min_R1 1 TMSSDDEDCSAK 12 0 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 T(0.333)MS(0.333)S(0.333)DDEDCSAK 42.041000000000004 0.023125 11288000.0 2206.8 1978.6 2257.9 2024.8 2401.3 2162.8 2176.5 2061.4 2298.3 2832.9 2761.6 True False 2430.8327114397043 2145.343565897303 2411.134671855694 2149.867297345553 2232.640972035278 2145.1868738740545 2259.327898526499 2020.2837598629833 2201.710443553542 2654.030210534263 2421.9407072247536 1.0036714376154732 0.8857952465548189 0.9955382741877928 0.8876630591873724 0.9218396492429455 0.8857305496682348 0.9328584683294792 0.8341590501519668 0.9090686807425734 1.0958279047117778 1.0 11.241947830767867 -10.59310938043032 0.9977634506170194 0.9975584291416165 0.9157715192510776 0.3917531563413952 0.055730767652012285 0.47050267694215003 0.8708957697624059 0.025337297541519654 0.007841071261331978 2.5520584660141166e-11 10.59310938043032 -0.08178690989053894 T(ph)NKSPEAKPLPGK ddPTM_A549_MK2206_60min_R1 1 TNKSPEAKPLPGK 13 2 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.63)NKS(0.37)PEAKPLPGK 84.559 0.00068738 161790000.0 2296.8 2258.0 2279.3 2169.2 3113.6 2257.2 2339.1 2141.1 2641.9 2799.1 3258.4 True False 2684.443688631315 2372.922555302214 2602.539013577236 2700.6540973790884 2655.5935645609784 2496.0554057919026 2764.084192199178 2444.6074818437464 2043.5138682473855 2166.7813659406224 2449.249352734911 1.0960271095443093 0.9688366570976253 1.0625863841389431 1.1026456307372097 1.0842479397190232 1.0191103666128263 1.1285434000881585 0.9981047781492801 0.8343429246865093 0.8846716090875453 1.0 11.258123943676798 -8.52595754158355 24.516230810914337 0.9214809740790372 1.0625024190570078 0.6144072673801824 0.05505288352233996 47.775486244811425 380429.37570370425 0.011627737459017797 0.013220576255270546 2.9788076356917896e-09 8.52595754158355 0.14102144497797064 T(ph)NKSPEAKPLPGKLPK ddPTM_A549_MK2206_60min_R1 1 TNKSPEAKPLPGKLPK 16 3 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.562)NKS(0.438)PEAKPLPGKLPK 66.874 0.001067 11594000.0 2660.9 4189.0 3559.1 4166.5 4798.6 4223.7 3070.4 3833.4 5058.9 6153.2 5480.7 True False 3109.994867240971 4402.202207334356 4063.8338977856133 5187.292687041289 4092.732296666984 4670.649130534851 3628.2519360986503 4376.796189295136 3913.0672274032686 4763.187846417004 4119.690930375096 0.7549097541057059 1.0685758426381604 0.9864414506977597 1.2591460803029193 0.9934561514046255 1.1337377510767757 0.880709741924329 1.0624088707782335 0.9498448532999502 1.1562002895162131 1.0 12.00832039150244 -7.759627134169212 24.99973896013189 0.9770220973170959 1.0407463765800156 0.0 0.13278371989963278 112.54312466037669 1552503.629236189 0.017465300398878704 0.025170639155192343 1.739293467532387e-08 7.759627134169212 0.06372427926291968 T(ph)NKSPEAKPLPGKLPK ddPTM_A549_PD325901_60min_R1 1 TNKSPEAKPLPGKLPK 16 3 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.5)NKS(0.5)PEAKPLPGKLPK 50.425 0.0093443 16941000.0 7403.3 7238.0 9069.2 7363.0 8626.6 9325.1 9271.1 9450.0 8123.2 8839.3 9809.7 True False 8154.877565978596 7847.971661763214 9684.690449529937 7817.795787413729 8020.697376154386 9249.159477327054 9623.91678384059 9261.512336618413 7781.810153188935 8281.185089475619 8603.1690888118 0.9478922803672202 0.9122186929894589 1.125711973059396 0.9087111629109524 0.9322956800401723 1.0750874918122146 1.118647870859152 1.0765233416907698 0.9045283282074486 0.9625737915862991 1.0 13.070652477793857 -2.1784976626116914 22.91359870882968 0.9812054647394397 0.9858479610067743 0.0 0.08408230245848688 0.0 0.0 0.011582842722827547 0.0 0.00662982915858639 2.1784976626116914 0.004642496267334595 T(ph)NRTSQDYDQLPSCSDGSQAPARPPKPR ddPTM_A549_MK2206_60min_R1 2 TNRTSQDYDQLPSCSDGSQAPARPPKPR 28 3 Q13191 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 T(0.435)NRT(0.282)S(0.282)QDY(0.001)DQLPSCSDGSQAPARPPKPR;T(0.333)NRT(0.333)S(0.333)QDYDQLPSCSDGSQAPARPPKPR 128.33 2.4765999999999998e-27 14205500.0 1560.92 1649.9299999999998 1476.7 1087.96 1749.44 1802.82 1456.99 1524.31 2318.7 2033.8200000000002 2001.4 True False 1824.3651351699716 1733.9043895791765 1686.1182649714851 1354.5102488403797 1492.0996934691539 1993.5932157849368 1721.706223415963 1740.3856105035936 1793.5181522030402 1574.3786494506644 1504.397144170038 1.2126885126310558 1.1525576183779287 1.1207933167818536 0.900367468849225 0.9918256620277829 1.3251774795709172 1.1444492766342045 1.1568658031877268 1.1921839649546182 1.0465179726987812 1.0 10.554969757456032 -10.957517539345291 1.2380140242769744 1.0004391904200727 1.1348348858605468 0.1335407653174181 0.10607641395289633 0.6858219411311273 1.8787253449471486 0.07712166712083579 0.018174826876656152 1.1027636969175102e-11 10.957517539345291 0.13439569544047414 T(ph)NRTSQDYDQLPSCSDGSQAPARPPKPR ddPTM_A549_PD325901_60min_R1 1 TNRTSQDYDQLPSCSDGSQAPARPPKPR 28 3 Q13191 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 T(0.333)NRT(0.333)S(0.333)QDYDQLPSCSDGSQAPARPPKPR 144.43 8.2012e-36 10079000.0 1032.8 1098.4 1091.7 1156.8 1385.9 1023.7 932.85 1149.4 1242.8 1250.8 1195.7 True False 1137.6490956928255 1190.9660228351352 1165.7893269253993 1228.2529087165829 1288.559165095445 1015.3633266066531 968.3501172251072 1126.474315313144 1190.5694379534186 1171.8242745371363 1048.6364801668024 1.0848841492829473 1.1357282007256633 1.111719217263891 1.1712856952308293 1.2287949060197478 0.968270078154389 0.9234373737132201 1.0742276628922545 1.1353500097231402 1.117474259860518 1.0 10.03429892525352 -7.262572648678284 24.99971954329859 1.0485785542077302 1.1453316436075334 0.39156314588542496 0.06736540920360048 109.41864649154668 2413771.510281841 0.011563638135021136 0.01914028852825472 5.462951581131424e-08 7.262572648678284 0.0967530893998032 T(ph)NSFNSHQPRPGPPGK ddPTM_A549_MK2206_60min_R1 1 TNSFNSHQPRPGPPGK 16 1 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 T(0.574)NS(0.426)FNSHQPRPGPPGK 70.414 0.00079451 8598000.0 1165.8 1319.5 1191.8 976.35 1372.1 1114.1 882.15 1247.7 1654.7 1677.6 1927.2 True False 1362.5585389265013 1386.6569139598193 1360.815160962292 1215.555793830017 1170.2659076098792 1231.9933225202726 1042.4252362654465 1424.5652959209956 1279.9130920129262 1298.6289948561991 1448.6230519858577 0.9405887453320765 0.957224111585763 0.9393852728608775 0.8391111767575847 0.8078470834808336 0.8504581787728586 0.7195972995434724 0.9833926734550563 0.8835377086249911 0.8964574967076232 1.0 10.500466522911854 -10.437332343714607 0.6870813657056395 1.003756986612505 0.8762547918874313 0.05096442166815507 0.07787552811105232 0.8482683091215698 0.6936976579627294 0.05933650165203385 0.015451339286294314 3.6531512733488316e-11 10.437332343714607 -0.12750219472507363 T(ph)NSMQQLEQWIK ddPTM_A549_PD325901_60min_R1 1 TNSMQQLEQWIK 12 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 T(0.6)NS(0.4)MQQLEQWIK 63.159 0.0033891 1701200.0 1865.6 1689.8 1516.7 1662.0 2383.1 2103.1 1988.7 1845.8 2839.0 2425.7 2282.5 True False 2054.994338617867 1832.2053763536148 1619.6323826580137 1764.6579653241367 2215.7192772486856 2085.9730508805833 2064.381066758396 1808.9840709979126 2719.68670288844 2272.540888027447 2001.766969959625 1.0265901922936194 0.915294039640673 0.8091013624281558 0.8815501463488177 1.1068817252456593 1.0420658758909669 1.0312794135073746 0.903693635745423 1.358643010751294 1.1352674522715718 1.0 10.967058321347858 -7.565549131727955 0.8563276700746277 1.1537753231624157 0.9140659502969923 0.24685383632158697 0.12403525768072936 0.5741321038780169 0.8444188733056625 0.03007637803593461 0.06069256984121617 2.719260838760962e-08 7.565549131727955 -0.23970937286542338 T(ph)NSPAYSDISDAGEDGEGKVDSVK ddPTM_A549_MK2206_60min_R1 1 TNSPAYSDISDAGEDGEGKVDSVK 24 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.444)NS(0.359)PAY(0.15)S(0.045)DIS(0.001)DAGEDGEGKVDSVK 68.733 5.3062e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)NTMNGSKSPVISRPK ddPTM_A549_PD325901_60min_R1 1 TNTMNGSKSPVISRPK 16 2 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 T(0.539)NT(0.427)MNGS(0.017)KS(0.017)PVISRPK 44.806999999999995 0.024534 14840000.0 2675.8 3076.8 3101.8 2606.7 2906.8 3193.4 3107.3 2954.9 3617.3 3545.0 4054.9 True False 2947.4452461801534 3336.0927340305375 3312.306800638643 2767.7099387547696 2702.6363959156056 3167.3940091683976 3225.5500018798048 2895.962201425794 3465.2774604995957 3321.1680950065142 3556.1730061289322 0.8288250434105261 0.9381131706137202 0.9314245383815706 0.7782832651799347 0.7599845089813437 0.8906748922815374 0.907028425310211 0.8143479511358729 0.9744400664780141 0.933916344700498 1.0 11.796109796966107 -8.836459102474315 6.524340236477969 0.9885929293995279 0.8585123221316594 0.4199816785302588 0.05819675040319932 0.1255089920595089 8.711337422725245 0.010200020563741675 0.0108412143191859 1.4572729297089347e-09 8.836459102474315 -0.13008060726786852 T(ph)NTPVKEDWNVR ddPTM_A549_PD325901_60min_R1 1 TNTPVKEDWNVR 12 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;A0A494C0Q7 P78347-2 GTF2I General transcription factor II-I 1 T(0.606)NT(0.394)PVKEDWNVR 75.376 0.00049362 411520000.0 10059.0 9030.8 8023.7 9122.4 8515.3 9560.5 8599.3 8501.0 10616.0 10019.0 10586.0 True False 11080.182274955576 9791.85720959536 8568.236532427713 9685.869929526416 7917.214704190227 9482.64245777367 8926.551067217511 8331.440886094508 10169.846438134442 9386.39863014676 9283.989110182962 1.1934721318018884 1.0547036509182623 0.9229046297598313 1.043287515159045 0.8527815586843359 1.0213974128182486 0.9614995193635674 0.8973988214781866 1.0954177474184934 1.011030766920167 1.0 13.18052911511115 -13.459634986169684 11.779848277149293 0.5792768718114287 1.0193214385530736 0.0 0.09226049107749743 0.0 0.0 0.0 0.012143940894850765 3.4702839674872707e-14 13.459634986169684 0.4400445667416448 T(ph)PAQPQRR ddPTM_A549_MK2206_60min_R1 1 TPAQPQRR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 T(1)PAQPQRR 44.203 0.038154 2266700.0 299.13 272.05 256.22 206.37 161.86 260.61 98.581 225.72 308.96 355.05 414.48 True False 349.61583097365246 285.8961829804991 292.55584875126567 256.93065926430114 138.0506084146455 288.1875772210829 116.49189164686724 257.71650123850856 238.98105330773768 274.84395840706577 311.5531769339446 1.1221706496922608 0.9176481067985216 0.9390238020692476 0.824676743125542 0.44310447986192397 0.9250028520241484 0.37390692912614987 0.8271990797036537 0.7670634453469443 0.882173506018647 1.0 8.2833346180361 -5.346717156124953 1.3821616056080128 0.8169321268611697 1.203968441868582 0.21455542125059235 0.1901223630082317 1.57041418586341 2.938257297430474 0.02942706748015494 0.804622837068462 4.500728793685457e-06 5.346717156124953 0.3870363150074124 T(ph)PAQPQRR ddPTM_A549_PD325901_60min_R1 2 TPAQPQRR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 T(1)PAQPQRR;T(1)PAQPQRR 47.187 0.023514 5048200.0 411.04999999999995 586.7 548.79 640.8 517.77 751.6800000000001 613.86 809.24 704.94 773.8299999999999 597.6899999999999 True False 452.77949340098354 636.1432680238293 586.0341895423561 680.380760637609 481.4036214095308 745.5585672987095 637.2207782170813 793.0990733635012 675.3138232948845 724.9702417373461 524.1779190690771 0.8637897113352374 1.2136018036654403 1.1180062498304655 1.2979958443231319 0.9183973683296082 1.4223387521221749 1.215657422862765 1.5130341140123174 1.288329398716794 1.3830613907294484 1.0 9.033912771368378 -5.258064965529571 23.89506129679537 1.1839445895670198 0.8637894972646946 0.2249321987368489 0.17562023488073328 215.20775541918474 1523800.8522637668 0.02437847606293413 0.2415129494165315 5.519948609329736e-06 5.258064965529571 -0.3201550923023252 T(ph)PARTPDR ddPTM_A549_PD325901_60min_R1 1 TPARTPDR 8 1 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 T(0.872)PART(0.128)PDR 53.753 0.0096553 31102000.0 3073.4 2641.3 2368.0 2725.0 2752.7 2910.4 2765.5 2807.4 2603.1 2927.4 2688.5 True False 3385.409305482503 2863.8916206431572 2528.706719940776 2893.3170610759744 2559.359848299465 2886.6986673400443 2870.7426158396684 2751.4042046373056 2493.7007595240925 2742.5634644067904 2357.831543805675 1.4358147486729516 1.2146294455034188 1.0724713250121756 1.2271093194410296 1.0854718841230326 1.2243023361544936 1.217535079374723 1.166921450290033 1.0576246492567982 1.163171928720631 1.0 11.203244932751742 -2.0000000036542973 0.09663496615965766 0.8799051243998859 2.0715356928715902 0.25932544364655996 0.09686866984848172 64.94284628461696 0.4332395909796012 0.621504820423863 10.292603228984243 0.009999999915856695 2.0000000036542973 1.1916305684717043 T(ph)PDIAQR ddPTM_A549_MK2206_60min_R1 2 TPDIAQR 7 0 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 T(1)PDIAQR;T(1)PDIAQR 80.455 0.016808 23348000.0 3074.0 3097.1 3124.8999999999996 2879.9 5501.8 4023.5 3222.3 4130.2 5716.5 4976.4 4816.9 True False 3592.816047915649 3254.729161216334 3568.0578087691424 3585.4756292836255 4692.492508190388 4449.264099416853 3807.750199873207 4715.6684982070165 4421.721877374683 3852.2277837401007 3620.7307903231 0.9922903015926904 0.8989149842112107 0.9854523894196351 0.9902629709080557 1.2960070162442674 1.2288304094046767 1.0516523929506005 1.3024079312414742 1.2212235964055493 1.0639365384567414 1.0 11.822065197763331 -6.551008875159552 23.905967346713123 1.138664478874859 0.9587169054360428 0.4812348224597809 0.09738206380940723 110.63081260569146 94017.51977994332 0.0166625903396847 0.03468665870941677 2.81184336751475e-07 6.551008875159552 -0.17994757343881618 T(ph)PDIAQR ddPTM_A549_PD325901_60min_R1 2 TPDIAQR 7 0 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 T(1)PDIAQR;T(1)PDIAQR 66.273 0.025854000000000002 20723000.0 5666.200000000001 5136.1 5136.3 5567.9 6144.0 4850.7 5298.0 5480.0 5410.0 5698.2 6270.5 True False 6241.428452764028 5568.937172144517 5484.880205081005 5911.81653738162 5712.4666356493335 4811.197507444462 5499.6182891768385 5370.697101023165 5182.636513781777 5338.414679539104 5499.268251974514 1.1349561735823746 1.012668761911185 0.9973836433804911 1.0750187600430259 1.0387685004451765 0.8748795816092441 1.000063651596228 0.976620316547536 0.9424229327094472 0.970750004352369 1.0 12.425023947030127 -7.033636269729437 24.94414619966812 0.9681727051632937 1.0489951266309065 0.4867377090063906 0.0462449530615248 447.74109684054457 332037.3639574702 0.006730660881476005 0.011662952902957342 9.254729514598521e-08 7.033636269729437 0.08082242146761287 T(ph)PDRER ddPTM_A549_MK2206_60min_R1 1 TPDRER 6 1 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 T(1)PDRER 63.565 0.023663 34248000.0 1072.4 797.0 488.55 404.04 223.31 0.0 123.76 0.0 75.79 1321.3 1416.1 True False 1253.3949023372616 837.5638957377611 557.8337362712932 503.0298181380451 190.46139481696818 0.0 146.24559002461217 0.0 58.62368601176025 1022.8174123172957 1064.4432876282544 1.1775121482798965 0.786856289548299 0.5240614908796445 0.47257549930994813 0.17893052361798048 0.0 0.13739162219761858 0.0 0.05507450391498354 0.9608942291291933 1.0 10.05588337128927 -10.940493364153882 1.2375176502631287 0.9950443243330014 0.3289922011010504 0.3058356572444332 0.3493255368367867 0.4706688410129467 1.296338662329807 0.2599127093138463 0.06282576095382048 1.146850044698948e-11 10.940493364153882 -0.666052123231951 T(ph)PDRER ddPTM_A549_PD325901_60min_R1 1 TPDRER 6 1 F8W1J5;F8VVA2;Q9BUQ8;Q9BUQ8-2 F8W1J5 DDX23 Probable ATP-dependent RNA helicase DDX23 1 T(1)PDRER 41.652 0.059133000000000005 62781000.0 534.2 448.05 621.48 560.17 465.82 429.49 210.93 273.95 434.68 742.48 496.96 True False 588.4315907427449 485.8087459316116 663.6573700628353 594.7704286616257 433.1024101917598 425.99237583695555 218.95705657532488 268.48585234038234 416.4119112404185 695.5996860875704 435.83707048899697 1.3501182680090547 1.1146567807702723 1.5227189585278516 1.3646623220790053 0.9937254986268861 0.9774119841595944 0.5023828200975681 0.616023442060926 0.9554302271103648 1.596008538941231 1.0 8.767645101088851 -6.84214586713732 4.076462216626896 0.9110529754105754 1.3362616984820612 0.3163057499199373 0.2736819438033762 0.1433050139510229 4.553019565238845 0.02919758417455204 0.05770152092286491 1.4383154079711013e-07 6.84214586713732 0.42520872307148583 T(ph)PDTIR ddPTM_A549_MK2206_60min_R1 2 TPDTIR 6 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 T(1)PDTIR;T(1)PDTIR 104.37 0.031279 25708000.0 3532.7 4241.4 3122.5 2498.1000000000004 7124.9 4908.700000000001 4424.9 5112.2 7286.799999999999 5095.6 4704.2 True False 4128.933393777363 4457.2691435158595 3565.317452680612 3110.1346121439715 6076.836648297961 5428.135375868653 5228.847053166661 5836.870005455888 5636.351434628502 3944.500420952103 3536.0173106848642 1.1676790668701962 1.2605337451395466 1.008286198686644 0.879558649994729 1.7185539872600297 1.5350986431730218 1.4787390993156437 1.6506904499077208 1.5939829869036586 1.1155206760535126 1.0 11.787909622168037 -6.743619894267133 24.999928880100708 1.375105210376318 1.086928146041686 0.3467194293191387 0.22805191130338787 336.329983132791 471853.20034973253 0.0414557150334187 0.08615358778687342 1.80459647926939e-07 6.743619894267133 -0.28817706433463197 T(ph)PDTIR ddPTM_A549_PD325901_60min_R1 2 TPDTIR 6 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 T(1)PDTIR;T(1)PDTIR 108.09 0.027587 25222000.0 4359.7 3919.1 4374.1 4328.3 4513.0 4114.1 4240.2 3842.3 4318.1 5433.799999999999 5411.2 True False 4802.293534558491 4249.376311082647 4670.952729600067 4595.649260717486 4196.022449004791 4080.596133625506 4401.563131326468 3765.6623122739634 4136.625273597244 5090.7089406618925 4745.656704423011 1.0119344557904268 0.895424295466247 0.9842584536818014 0.9683905825792842 0.8841816233976735 0.8598591065009694 0.9274929489156171 0.7934965689288732 0.8716655104322775 1.0727090596159827 1.0 12.212392025998895 -5.249545835331699 22.951564850051977 0.9226088943871734 1.0119346307859267 0.10004592283286107 0.07376766041180066 966.7723384640943 1865515.475684985 0.009419143413363192 0.19498487270497977 5.629297027980506e-06 5.249545835331699 0.0893257363987533 T(ph)PDTIRR ddPTM_A549_MK2206_60min_R1 1 TPDTIRR 7 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 T(1)PDTIRR 87.30799999999999 0.0079824 8120100.0 446.28 442.65 478.84 441.98 1016.5 589.87 704.57 636.1 1310.2 676.67 929.53 True False 521.60115350156 465.1789942889835 546.7467122631173 550.265119841236 866.9741965494072 652.2896518759836 832.5812488981983 726.2691229745493 1013.4417919594704 523.8097770322746 698.702047277093 0.7465287321459674 0.6657759142138332 0.7825176903285744 0.7875533240322831 1.2408353459505184 0.9335734086053092 1.1916112914551273 1.0394546943219756 1.4504634642319247 0.7496897698720222 1.0 9.448533557312704 -6.687589833199212 0.9924318026560333 1.1973842451168197 0.6785056288578355 0.30826162200877016 0.19733065857990859 0.331305791561951 0.6112298718725311 0.029748082460807346 0.10634198466481927 2.0531003016387979e-07 6.687589833199212 -0.5188786162589842 T(ph)PDTIRR ddPTM_A549_PD325901_60min_R1 2 TPDTIRR 7 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 T(1)PDTIRR;T(0.994)PDT(0.006)IRR 94.85 0.0073914 13310300.0 1518.5 1449.21 1117.38 1275.03 1456.69 1448.74 1523.33 1431.3200000000002 1492.97 1976.31 1885.7199999999998 True False 1672.6570021393823 1571.3400127029379 1193.2121261517848 1353.7857072967706 1354.377119707687 1436.941941768216 1581.3011567481599 1402.771199751182 1430.2256628430268 1851.5254493208251 1653.7883945639717 1.0114093239724211 0.9501457489168246 0.7215022974365353 0.8185966909349983 0.8189543016262212 0.868878960870367 0.9561689766030053 0.848216860368662 0.8648178131762208 1.1195661158385306 1.0 10.691558935348379 -10.732448327828669 0.6293156087881678 1.017801364835497 0.8670278252368153 0.3876004319830645 0.08364715392492067 1.1423633022470654 0.6544771194692472 0.09683884459608455 0.01621618090715922 1.8516191859570992e-11 10.732448327828669 -0.15077353959868178 T(ph)PDTPNNDPR ddPTM_A549_MK2206_60min_R1 1 TPDTPNNDPR 10 0 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 T(0.529)PDT(0.471)PNNDPR 90.05 0.00071006 11192000.0 785.34 825.83 785.07 582.2 904.82 580.67 779.16 960.69 895.2 1006.1 1156.4 True False 917.886192280441 867.8612195948743 896.404731009117 724.8390261359511 771.7221766078065 642.116113982449 920.7232863895997 1096.8707494897337 692.4386293406485 778.8213112332032 869.2339649836265 1.0559713831450788 0.9984207411996631 1.031258288470127 0.8338825394951114 0.8878187089966546 0.7387149373466375 1.0592352847221556 1.2618820636057348 0.7966078837631382 0.8959858249992264 1.0 9.763600738150432 -6.22141710763044 23.57607634752005 0.9219855889231783 1.0255373056036126 0.082845617012957 0.1351971058019981 541.9301968551558 319234.89503561176 0.020258988661402445 0.053598915906632405 6.005966318862039e-07 6.22141710763044 0.10355171668043428 T(ph)PDTSTYCYETAEK ddPTM_A549_MK2206_60min_R1 2 TPDTSTYCYETAEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.998)PDT(0.002)STYCYETAEK;T(0.999)PDTSTYCYETAEK 219.84 4.144600000000001e-39 54523000.0 10457.2 11878.9 11856.5 10146.3 18490.6 15473.4 12832.4 13350.900000000001 18893.4 15370.6 15156.0 True False 12222.119706006344 12483.485271115786 13537.929984854347 12632.143955484711 15770.657234349705 17110.784917588357 15163.880974723923 15243.430960416474 14614.075066560106 11898.370784654684 11392.34691567957 1.0728359833551713 1.0957781889466913 1.1883354751268815 1.108827184510926 1.3843203117914322 1.5019543421767079 1.3310585682616016 1.338041324868413 1.2827975811065226 1.0444178774330213 1.0 13.475777364069454 -3.9780525667495357 16.104704377260315 1.1926783234217655 1.1883342922284077 0.0 0.15686910436980583 0.0 0.0 0.023819628288232194 0.0 0.00010518345526801976 3.9780525667495357 -0.0043440311933578 T(ph)PDTSTYCYETAEK ddPTM_A549_PD325901_60min_R1 2 TPDTSTYCYETAEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PDTSTYCYETAEK;T(1)PDTSTYCYETAEK 236.4 2.8261999999999996e-57 73218000.0 13497.0 14690.2 13767.2 13791.7 14055.3 13003.5 14252.1 13838.8 10734.900000000001 12744.8 15048.5 True False 14867.205504033745 15928.194709261381 14701.52498089893 14643.581985776706 13068.104216152686 12897.603807296677 14794.47146454837 13562.774277671428 10283.749484620328 11940.091152958821 13197.629900301172 1.126505714764321 1.206898119555383 1.1139519059072447 1.1095614967534844 0.9901856859809707 0.9772666686919559 1.1209945707153643 1.027667420599658 0.7792118404824833 0.9047148043366746 1.0 13.68799124564119 -7.23474787217777 0.6323775554200727 0.905344409472288 1.1686071041343342 0.5147400866578424 0.080270793705181 0.5501030398703048 0.4154192376623693 0.02182330305471145 0.06606689314460513 5.824412534418338e-08 7.23474787217777 0.2632626946620462 T(ph)PEEGGYSYDISEK ddPTM_A549_MK2206_60min_R1 2 TPEEGGYSYDISEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK 198.78 2.6611999999999997e-31 74043000.0 4766.6 4708.6 4858.799999999999 4540.1 9552.7 7141.2 6927.9 7232.8 11025.099999999999 7489.299999999999 7839.799999999999 True False 5571.085547818712 4948.247627943311 5547.850901228043 5652.424703812835 8147.510484385176 7896.877044055089 8186.609753809882 8258.071549521024 8527.932453466921 5797.46192845525 5892.9612925273605 0.9453796268580948 0.8396877872281285 0.9414368474239023 0.9591823911995586 1.3825834041565357 1.3400524205154407 1.389218314430643 1.401344950287179 1.4471387185727602 0.9837943337260319 1.0 12.524777074648956 -6.673668901201346 6.131273844071529 1.2635562782780363 0.9110713221442766 0.5690543013526163 0.1490499794409411 0.15276056407268823 8.632919439334893 0.026497906275681597 0.05547770225024292 2.1199767538827316e-07 6.673668901201346 -0.35248495613375974 T(ph)PEEGGYSYDISEK ddPTM_A549_PD325901_60min_R1 2 TPEEGGYSYDISEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK 213.99 2.1858e-38 98605000.0 11578.3 12397.4 11611.8 11411.900000000001 13106.3 11151.0 12159.400000000001 12411.8 10771.3 12986.7 14374.1 True False 12753.72049250603 13442.172406679085 12399.846575425801 12116.787144694654 12185.758702280411 11060.18995310227 12622.132620878987 12164.236912131259 10318.619719204744 12166.71754567592 12606.176824927345 1.0117040772652763 1.0663163458169689 0.9836326070650105 0.9611785803872768 0.9666498313893549 0.8773627489685807 1.0012657125291224 0.964942589737263 0.8185368064011918 0.9651393689494786 1.0 13.621843184000312 -6.292687700426604 0.9537880869427785 0.920905806316342 1.0464110498018147 0.2673576162751885 0.05443073163955591 0.7303594087200411 1.085373027391411 0.011348007704904357 0.06478990733850287 5.096972607425209e-07 6.292687700426604 0.12550524348547265 T(ph)PEFLR ddPTM_A549_MK2206_60min_R1 2 TPEFLR 6 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 T(1)PEFLR;T(1)PEFLR 122.74 0.016874 107810000.0 5240.9 5203.2 5691.6 4857.0 10307.5 7981.4 5901.7 7514.299999999999 10080.1 7005.700000000001 6910.5 True False 6125.435792297044 5468.020655335906 6498.75446394779 6046.9652180390185 8791.280404262687 8825.986450375467 6973.9624971578305 8579.47503657861 7796.973444612007 5423.107504330037 5194.432129902591 1.1792310764895702 1.0526695736110128 1.2511000820545244 1.1641244060594578 1.692443020605516 1.6991244143064732 1.3425841983786992 1.6516675590368135 1.5010251842020352 1.0440231711010408 1.0 12.342750322886113 -4.226569188119875 13.093612944002142 1.3084066404632404 1.2642943858401179 0.0 0.2571601624016984 0.0 0.0 0.03791330189435738 0.0 5.9351378706769836e-05 4.226569188119875 -0.044112254623122515 T(ph)PEFLR ddPTM_A549_PD325901_60min_R1 2 TPEFLR 6 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 T(1)PEFLR;T(1)PEFLR 135.84 0.01075 168364000.0 7028.5 7253.4 6852.5 6625.200000000001 8349.8 6332.0 6712.4 6599.1 7201.2 8489.7 8905.1 True False 7742.028145891769 7864.669473809515 7317.551857429975 7034.423557079101 7763.338853246229 6280.434291367906 6967.8440551662225 6467.475773606203 6898.5586068475695 7953.6588931387305 7809.829154079941 0.9913185030234942 1.0070219615112739 0.9369669570309621 0.9007141408982346 0.9940472064219964 0.8041705096822684 0.8921890501953098 0.8281200069821658 0.883317479902065 1.0184165026175573 1.0 12.93107527332927 -5.832724786361921 4.747522137527415 0.922709746924701 0.9993541674848646 0.1889810758560041 0.06492755131217562 0.27465371799807387 11.511548347471717 0.009550145994134344 0.03238765939265376 1.4698574353764915e-06 5.832724786361921 0.07664442056016363 T(ph)PEGISEEQR ddPTM_A549_MK2206_60min_R1 1 TPEGISEEQR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(0.999)PEGIS(0.001)EEQR 62.408 0.0074661 4478400.0 469.44 350.31 225.11 194.81 545.0 510.11 298.91 296.0 527.82 507.65 457.44 True False 548.6699952939241 368.1392827050126 257.03398295370135 242.53845874535327 464.8312219571344 564.0895016163867 353.21807784628965 337.9589064619817 408.2696127553409 392.9715124217628 343.8450232982622 1.5956897966151167 1.0706546780107873 0.7475285827555568 0.7053714386174716 1.3518625847724568 1.6405341458936205 1.0272595323850213 0.9828814831175419 1.1873651938861849 1.1428739280628954 1.0 8.425614654417119 -5.260439633138668 23.461343721113234 1.084473251632911 1.595690138380667 0.2600652271844873 0.24732552143142425 38.95159544229293 913744.100693391 0.034646562397866815 0.2914445710401871 5.489848591086766e-06 5.260439633138668 0.511216886747756 T(ph)PEGISEEQR ddPTM_A549_PD325901_60min_R1 1 TPEGISEEQR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(1)PEGISEEQR 101.93 0.00043666 4579500.0 609.91 781.67 477.04 667.08 584.36 376.88 368.83 484.83 420.3 569.59 682.63 True False 671.8276142079886 847.5440741711033 509.41480307455583 708.2840165513985 543.3165695325594 373.8108142341659 382.8660274815202 475.15968530822266 402.63625263262117 533.6259901931626 598.6708375481006 1.1221986642267507 1.4157096371058941 0.8509096670900168 1.1830942349759788 0.90753805840577 0.6244012415322164 0.6395267707536506 0.7936910494158581 0.6725503020685738 0.8913512346428399 1.0 9.225619185170881 -6.885411904994468 4.346467826637295 0.805113437170918 1.1410701439209785 0.5314206409251861 0.1613535873246578 0.16403970169642382 5.477364922068738 0.026717922831873818 0.05194615483821283 1.3019313806898303e-07 6.885411904994468 0.3359567067500605 T(ph)PELPEPSVK ddPTM_A549_MK2206_60min_R1 2 TPELPEPSVK 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(1)PELPEPSVK;T(1)PELPEPSVK 159.94 1.0759999999999998e-08 52216000.0 12812.0 15884.1 15198.3 14620.8 22976.0 15867.5 14848.5 15765.2 24470.0 20739.6 22657.0 True False 14974.352376673807 16692.53284352341 17353.647475124348 18202.89665635266 19596.260836123158 17546.58831800595 17546.280247902832 17999.965378900113 18927.584070560406 16054.509955722242 17030.641598611248 0.8792594389335796 0.9801470336199544 1.0189661601791584 1.0688321136319963 1.1506472450057972 1.0302952015288005 1.0302771123627916 1.05691645700347 1.111384087379529 0.9426838010043848 1.0 14.055845166515331 -5.398709943405122 1.5273899128778068 1.0581190129258233 0.8406000681272549 0.4672787905137662 0.052508710301176514 0.48857741216077394 1.2714783424729352 0.007029686874810879 0.14661764367107472 3.992914921256109e-06 5.398709943405122 -0.21751894479856848 T(ph)PELPEPSVK ddPTM_A549_PD325901_60min_R1 2 TPELPEPSVK 10 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(1)PELPEPSVK;T(1)PELPEPSVK 148.28 3.4991e-08 76171000.0 11227.7 11505.1 11499.9 11878.3 12960.9 13375.5 13222.3 12483.8 13238.2 12877.0 15038.400000000001 True False 12367.527838604115 12474.675154151964 12280.35236851644 12611.995613423403 12050.571096677648 13266.574362632897 13725.481862020179 12234.800815648348 12681.844491080574 12063.944022397438 13188.772136272004 0.9377315576323222 0.9458556888585468 0.9311217330643532 0.9562676102908519 0.9136992414582662 1.0058991258289254 1.040694442227272 0.9276679200484459 0.96156369676012 0.9147132043641089 1.0 13.687022636681123 -7.262904338387681 24.999668963883757 0.9833186118109185 0.9381818070572852 0.20982207845821554 0.034892746524038905 116.13506519198913 1981858.7812030115 0.004440658159566407 0.007325592728816666 5.4587808787156874e-08 7.262904338387681 -0.04513680475363335 T(ph)PENHENLFLQPPK ddPTM_A549_PD325901_60min_R1 1 TPENHENLFLQPPK 14 0 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 T(1)PENHENLFLQPPK 99.891 2.9588000000000002e-05 4222900.0 1734.3 1642.4 1524.8 1791.6 1963.5 1908.2 2091.1 1840.1 1914.3 1876.6 2024.4 True False 1910.3648592758204 1780.8108120033003 1628.2820973672706 1902.2630629811817 1825.5905337072702 1892.6602518616928 2170.677954793826 1803.397761969475 1833.848628157571 1758.1111557374409 1775.4116337289224 1.076012358476808 1.0030410853301879 0.9171293385902662 1.0714490244641641 1.0282632483786063 1.066040244360972 1.2226336211590096 1.0157631772310587 1.0329146172743684 0.9902555116442798 1.0 10.793937840597634 -5.235402679539174 21.49619426406023 1.0294797063862642 1.0760127409931166 0.02204966392799257 0.07156506952668103 3639.943801074944 3004849.527222264 0.009696794202807509 0.7352668344503542 5.8156373953654465e-06 5.235402679539174 0.04653303460685243 T(ph)PENLITEIR ddPTM_A549_PD325901_60min_R1 2 TPENLITEIR 10 0 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 T(1)PENLITEIR;T(1)PENLITEIR 56.783 0.015366 8048700.0 846.1 1434.17 1174.22 873.94 1091.9 1282.31 838.36 1264.53 936.3 1047.31 1365.38 True False 931.9954491341008 1555.0325391200531 1253.9096303584715 927.9212889382528 1015.2087108505065 1271.8672925085257 870.2642485681948 1239.3079571454057 896.9505670709568 981.1826678649574 1197.4469158569434 0.7783188021049983 1.2986233615268084 1.0471525825101993 0.7749164298228564 0.8478110364700221 1.0621492073394534 0.726766453730767 1.0349585778994677 0.7490524675401258 0.8193955446975132 1.0 10.225745985778078 -6.139770006874669 7.248415450274845 0.8839797793645456 1.070634268904993 0.17524765155931044 0.15545886746711565 0.2986495354913777 16.496176845614006 0.020936947336525298 0.05589871379549326 7.248197075625848e-07 6.139770006874669 0.1866544895404474 T(ph)PESKPTILVK ddPTM_A549_MK2206_60min_R1 2 TPESKPTILVK 11 1 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 T(0.997)PES(0.003)KPTILVK;T(0.997)PES(0.003)KPTILVK 60.55 0.0032698999999999996 16954300.0 5001.9 5628.2 5520.3 5873.1 8617.2 7519.6 6356.5 6382.9 10607.1 7332.0 8076.3 True False 5846.098435286039 5914.651340014135 6303.161548128993 7312.009763653479 7349.621295135815 8315.3190808935 7511.393770131282 7287.695621811433 8204.60878605808 5675.69610770485 6070.731815459413 0.9629973144915849 0.9742896770620287 1.0382869380060056 1.20446924455353 1.2106647960332637 1.3697391572657083 1.2373127323798347 1.2004641027384808 1.351502427625718 0.9349278275234321 1.0 12.567654725837448 -6.122934159871054 2.9371473064906737 1.1969635637469054 0.9713654244720509 0.346442963636477 0.12194841130886674 0.24781284050940766 4.068174654872768 0.019391754585963716 0.06045550209280301 7.53469782977883e-07 6.122934159871054 -0.2255981392748545 T(ph)PESKPTILVK ddPTM_A549_PD325901_60min_R1 1 TPESKPTILVK 11 1 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 T(0.988)PES(0.01)KPT(0.002)ILVK 41.967 0.032975 11377000.0 3849.1 3468.6 3610.3 3642.9 4910.2 4637.0 4433.5 4304.7 5102.8 3969.7 3935.8 True False 4239.857798442343 3760.9110950527606 3855.3166684975467 3867.913659373824 4565.324491270402 4599.237809392448 4602.219268604287 4218.839381528176 4888.347061465 3719.0524645267583 3451.7215510918268 1.2283313516703622 1.0895754594872038 1.1169257460173916 1.1205752266286804 1.3226224722055948 1.3324475167869918 1.3333112768463442 1.2222420954534121 1.4162055047339344 1.0774485744223403 1.0 11.753100372278118 -6.722119978342788 24.68888757089294 1.230991786650322 1.1337659229776509 0.1493955759176171 0.11748313787360083 312.48025321712385 196206.49787019464 0.022938082469507792 0.047748802724647176 1.8961820089530923e-07 6.722119978342788 -0.09722586367267105 T(ph)PGKRPIK ddPTM_A549_PD325901_60min_R1 3 TPGKRPIK 8 2 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 T(1)PGKRPIK;T(1)PGKRPIK;T(1)PGKRPIK 55.567 0.007115000000000001 55106100.0 8953.8 9675.8 5760.3 5881.1 7932.9 9270.8 5578.8 7007.700000000001 9740.3 9778.8 6925.6 True False 9862.78318456082 10491.213623223048 6151.228597497826 6244.362190052816 7375.720471019307 9195.301678523949 5791.1042868364975 6867.925926065698 9330.949063805667 9161.364899139551 6073.79510499557 1.623825468931095 1.727291329698337 1.0127487824603383 1.0280824562087973 1.2143512159231271 1.5139301737328947 0.9534573008683541 1.130747054739626 1.5362633909285408 1.5083427644117464 1.0 12.568382525733696 -5.74936355965674 24.999877165533192 1.2175543354952925 1.675558656300448 0.4228124067087916 0.2092828905632907 180.38425434788988 373432.0781912055 0.031871320852801 0.12154484083657463 1.7808873143305693e-06 5.74936355965674 0.45800432080515563 T(ph)PGPPGLTTTPAPPDK ddPTM_A549_MK2206_60min_R1 2 TPGPPGLTTTPAPPDK 16 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 T(1)PGPPGLTTTPAPPDK;T(1)PGPPGLTTTPAPPDK 159.31 2.4827999999999998e-20 9320200.0 4235.3 4267.799999999999 4151.0 3711.8 5578.1 5041.6 4203.5 4070.3 5219.0 5681.2 6146.6 True False 4950.115096856584 4485.012790752339 4739.674218119207 4621.191166629036 4757.568879264387 5575.098765656772 4967.221539014685 4647.2774897709605 4036.9048330304363 4397.812974235241 4620.229582470047 1.0714002428879683 0.9707337504978663 1.0258525325456453 1.0002081247569683 1.0297256433566482 1.206671371225721 1.0751027520063474 1.005854234474308 0.8737455057097496 0.9518602692215354 1.0 12.173748826619796 -8.540875503748342 8.113301699927598 0.94026341734995 1.051963297968138 0.3804196371849058 0.06283580519340405 0.1542605263074234 52.794146807847596 0.012422947295329279 0.014200299517677331 2.8782233772484484e-09 8.540875503748342 0.11169988061818792 T(ph)PGPPR ddPTM_A549_MK2206_60min_R1 2 TPGPPR 6 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 T(1)PGPPR;T(1)PGPPR 104.45 0.031197000000000003 28845000.0 2865.1000000000004 2807.0 2988.8 2469.6 4388.200000000001 3275.4 2923.4 3279.8999999999996 4581.5 3431.3999999999996 3311.6000000000004 True False 3348.658835030297 2949.8643103336212 3412.6567822487805 3074.652110864555 3742.70159301339 3622.000653965445 3454.543938897472 3744.8358692724814 3543.7975651521238 2656.2443567891996 2489.2383244896046 1.3452544105903996 1.1850469604747322 1.3709642619087163 1.235177877753021 1.5035529367324827 1.4550638315068136 1.3877915605392241 1.5044103380660931 1.423647358425894 1.0670912184890284 1.0 11.281488648006064 -10.679541643536028 0.9280440891389086 0.9984367000459147 1.3788914684120965 0.6510964434058786 0.09691553301057863 0.2785645477484237 0.42429999019764186 0.07066606042612987 0.018383531332203887 2.0915023479593684e-11 10.679541643536028 0.38045476836618186 T(ph)PGPPR ddPTM_A549_PD325901_60min_R1 2 TPGPPR 6 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 T(1)PGPPR;T(1)PGPPR 110.63 0.025063 24132000.0 2692.8 2700.5 2913.3 2812.7 3375.8999999999996 2475.7 2746.8 2965.2 3180.5 3427.9 3455.2 True False 2966.1710736654118 2928.080612405575 3111.0140570960575 2986.4340908948247 3138.788430222752 2455.5387200157193 2851.330977106635 2906.0567598456014 3046.8346454866823 3211.461808990927 3030.2323043174147 0.9788593004698914 0.9662891548722862 1.0266586006173675 0.9855462522262115 1.0358243576740531 0.8103466907527573 0.9409611840795558 0.9590211138945056 1.005478900461068 1.0598071324153266 1.0 11.565212682795934 -8.761984613204584 24.840041236415804 1.0025872600099812 0.9625382054457042 0.1476017066313856 0.05817017980130384 24.87011337158501 1133037.5328348447 0.0096432682238724 0.01058087843460968 1.7298776466664544e-09 8.761984613204584 -0.04004905456427699 T(ph)PGPPRSTPLEENVVDREQIDFLAAR ddPTM_A549_MK2206_60min_R1 1 TPGPPRSTPLEENVVDREQIDFLAAR 26 2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 T(0.36)PGPPRS(0.32)T(0.32)PLEENVVDREQIDFLAAR 92.632 4.3168999999999994e-09 7245400.0 680.1 734.38 440.05 549.35 717.13 819.27 558.64 667.48 770.71 839.77 1012.3 True False 794.8842531514099 771.7568052094059 502.45570698225936 683.9407746612585 611.6411269763668 905.9646076125872 660.1376568467141 762.097334071769 596.145415570969 650.0653737544051 760.917971941305 1.0446385582449154 1.0142444174901641 0.6603283474831861 0.8988364053438544 0.8038200562090903 1.1906205938351402 0.8675542978207317 1.0015499201937037 0.7834555596709627 0.8543172821847205 1.0 9.57159712727233 -5.5508573813357 24.999936705633907 0.9001174676345531 1.037040885898464 0.1355927319019793 0.1308213654234695 276.4910488120268 247054.4484524219 0.018156685514158055 0.07032320139769324 2.8128243866766893e-06 5.5508573813357 0.13692341826391097 T(ph)PGSRQAS(ph)PTEVVER ddPTM_A549_MK2206_60min_R1 1 TPGSRQASPTEVVER 15 1 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 2 T(0.951)PGS(0.05)RQAS(0.577)PT(0.423)EVVER 66.536 0.0017702000000000002 20811000.0 768.24 919.49 892.64 724.68 656.71 365.55 456.58 481.58 858.26 1469.0 1081.5 True False 897.9001303353015 966.2881135406702 1019.2297745270845 902.2266325321217 560.1088289384769 404.2322583675483 539.5346759327524 549.8454397768961 663.86548035959 1137.1518797351914 812.9337021184645 1.104518274977921 1.1886431956536823 1.2537674005531112 1.1098403598976945 0.6889969347793816 0.4972511993464403 0.6636884096781227 0.6763718103260161 0.8166293003102096 1.3988248694473246 1.0 9.666993889522724 -6.633094397630917 5.8810142093751185 0.8295932899544869 1.1823389357852827 0.3572330870642425 0.2228759757356972 0.15004013938425573 7.236951133578615 0.02627728912313064 0.05521137870918872 2.3275852820513985e-07 6.633094397630917 0.3527456458307958 T(ph)PGTGSR ddPTM_A549_MK2206_60min_R1 2 TPGTGSR 7 0 Q5TF21;E9PJP2;Q8WUM0 Q5TF21;Q8WUM0 SOGA3;NUP133 Protein SOGA3;Nuclear pore complex protein Nup133 1 T(0.999)PGT(0.001)GSR;T(0.999)PGT(0.001)GSR 77.355 0.018295 21144000.0 4191.1 3137.8 2090.75 1391.24 3158.5 1458.98 1238.03 1600.58 2450.8 4861.0 4425.3 True False 4898.455217442836 3297.5006173725797 2387.249788372134 1732.0938624551366 2693.8888340396506 1613.3682952074573 1462.9640256801113 1827.4671165706725 1895.6977131233928 3762.8967238888786 3326.3758779332793 1.4726102512763262 0.9913193031634656 0.7176728896481066 0.5207150141827355 0.8098570134272977 0.4850228460079695 0.4398071893754442 0.5493868352923789 0.5698988276397718 1.1312301621868468 1.0 11.69973548593631 -3.202101463862893 9.444756845867326 0.760751970750678 1.1407154381200217 0.0 0.31281919186178886 0.0 0.0 0.04059148388004257 0.0 0.0006279116431942947 3.202101463862893 0.3799634673693437 T(ph)PGTGSR ddPTM_A549_PD325901_60min_R1 1 TPGTGSR 7 0 Q5TF21;E9PJP2;Q8WUM0 Q5TF21;Q8WUM0 SOGA3;NUP133 Protein SOGA3;Nuclear pore complex protein Nup133 1 T(0.984)PGT(0.016)GS(0.001)R 93.70100000000001 0.012838999999999998 15463000.0 1952.9 2148.1 1681.5 1783.4 1755.1 1325.8 1009.7 1518.4 1274.8 2766.4 2965.2 True False 2151.1569703510045 2329.127925757605 1795.6167016809202 1893.5565676047313 1631.8278307662993 1315.0031243675892 1048.1246860290403 1488.114320838243 1221.224589236416 2591.7290318832233 2600.499197951494 0.827209241996901 0.8956464695672056 0.6904892349497326 0.7281511830868295 0.627505608173903 0.5056733435655216 0.40304749444056187 0.5722417918876821 0.4696116000337236 0.9966275067205639 1.0 11.344572877638853 -3.644216913192783 17.40664042612749 0.7003773095495345 49.24107565956972 0.0 0.1986133621176333 0.0 0.0 0.03055680383210267 0.0 0.0002268731425798641 3.644216913192783 48.54069835002018 T(ph)PIITPNTK ddPTM_A549_MK2206_60min_R1 2 TPIITPNTK 9 0 Q9NQW6;Q9NQW6-2;H7C3S1 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.954)PIIT(0.045)PNT(0.002)K;T(0.993)PIIT(0.007)PNTK 94.302 0.0010088 11988400.0 5703.4 6879.700000000001 6383.5 5135.299999999999 8458.8 6722.1 5794.299999999999 6176.6 9220.6 9512.099999999999 8920.5 True False 6665.99448525768 7229.84734442544 7288.776287970119 6393.448730532374 7214.5217253046 7433.428160231153 6847.049307365951 7052.151965044175 7132.148822272546 7363.31000355964 6705.293656724698 0.9941390827189791 1.0782297859803156 1.0870182069744625 0.9534927264699918 1.0759441859894086 1.1085909940388985 1.0211408564484104 1.0517290257633407 1.0636594290124426 1.098133859681898 1.0 12.711084800658105 -10.848062861905971 1.0277409118721246 0.9992013588750096 1.0502692590871552 0.0 0.051290525470222344 0.8061424055522901 1.472418235096623 0.030575916286940046 0.007011614266876869 1.4188521352322868e-11 10.848062861905971 0.05106790021214558 T(ph)PIITPNTK ddPTM_A549_PD325901_60min_R1 2 TPIITPNTK 9 0 Q9NQW6;Q9NQW6-2;H7C3S1 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.649)PIIT(0.35)PNTK;T(0.993)PIIT(0.006)PNTK 93.162 0.0010432 28662000.0 6828.4 7361.7 6568.7 6574.8 8307.0 6803.5 7286.8 8267.2 8550.0 8041.7 9051.5 True False 7521.614141197605 7982.0962948883935 7014.491482801932 6980.910463545812 7723.544977594238 6748.094551693235 7564.103161489964 8102.304210507062 8190.673233425914 7533.945689594888 7938.222882186 0.9475186389735544 1.0055268557400736 0.8836349881965403 0.8794046938656166 0.9729564276818787 0.8500762263599947 0.9528710989539497 1.020669780976958 1.0318018724072906 0.9490720783995191 1.0 12.954600354244768 -8.145518899901843 4.254047733875291 1.0157935496506023 0.9239080126294588 0.3558332309561105 0.04655567248840388 0.14212543435813033 4.333610519616729 0.00674520606362094 0.008790837350979328 7.152882650310423e-09 8.145518899901843 -0.09188553702114355 T(ph)PISPLK ddPTM_A549_MK2206_60min_R1 1 TPISPLK 7 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.712)PIS(0.288)PLK 82.45200000000001 0.015849000000000002 603160000.0 2378.1 2556.0 2435.6 2131.8 3116.9 2422.3 2657.2 2432.6 3162.6 3358.9 3672.7 True False 2779.4651410371516 2686.0894824413026 2781.0047038427215 2654.09109570014 2658.4081389324624 2678.6261782073934 3139.978844646083 2777.428499525058 2446.276149634423 2600.1221571426377 2760.6672286366015 1.0068091917075546 0.9729856081813488 1.0073668694999376 0.9613947918709871 0.9629585599294989 0.9702821660002371 1.1373985289044817 1.0060714564633473 0.8861177197523203 0.9418455546439577 1.0 11.430801280328204 -8.662555458823359 24.276294409572763 0.9462038517014354 1.0029409644990694 0.20981746693133374 0.052166947547139374 14.8098498446086 3617.0750354816364 0.010374977691409187 0.011764117163787665 2.174926281113993e-09 8.662555458823359 0.05673711279763405 T(ph)PISPLK ddPTM_A549_PD325901_60min_R1 2 TPISPLK 7 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.834)PIS(0.166)PLK;T(0.954)PIS(0.046)PLK 88.948 0.013479 1003030000.0 22570.0 22636.2 21471.1 21488.5 26363.0 21687.3 24105.0 24212.0 22254.0 22065.9 24389.0 True False 24861.289784844157 24543.832015750824 22928.25796221301 22815.795841075647 24511.353827412662 21510.68581920139 25022.32896576212 23729.07266605345 21318.741770369634 20672.655308209945 21389.307614609123 1.1623232613599719 1.147481370504351 1.07194951680216 1.0666916504343609 1.145962939476879 1.0056747140571005 1.16985221852958 1.1093894713004286 0.9967008822580451 0.9664948338061352 1.0 14.384602161858991 -8.761269087589971 24.999996320784746 0.9984420771908405 1.1081862688879176 0.5701868846943928 0.046977502572283 2.374374542840037 348558.46625255217 0.007487602499438909 0.008230880032432551 1.7327300706067349e-09 8.761269087589971 0.10974419169707705 T(ph)PKASPPDPK ddPTM_A549_MK2206_60min_R1 1 TPKASPPDPK 10 1 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 T(0.634)PKAS(0.366)PPDPK 62.258 0.0028188 10668000.0 1963.5 2093.9 1660.8 1916.2 2624.5 1958.4 1929.3 1835.2 2658.8 2971.0 3031.8 True False 2294.8907970339546 2200.470566229984 1896.3264132624374 2385.6690860214867 2238.439526654126 2165.6365881192914 2279.828836736299 2095.345220064287 2056.586045231139 2299.8490365508874 2278.9203865767554 1.007007884325959 0.9655758837347479 0.8321161302659521 1.0468417852916232 0.9822368257526376 0.9502905853470242 1.0003986318104372 0.9194464327960912 0.9024387413201422 1.0091835810050256 1.0 11.154134810012492 -5.301422774202333 5.254552005996921 0.9540187408051437 1.00796875245328 0.04141698699492302 0.056824507954938264 0.3402154362687895 23.87678227950444 0.007689898211449412 0.05396218840949451 4.995480014222954e-06 5.301422774202333 0.0539500116481364 T(ph)PKGPSSVEDIK ddPTM_A549_MK2206_60min_R1 2 TPKGPSSVEDIK 12 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 T(1)PKGPSSVEDIK;T(0.994)PKGPS(0.005)S(0.002)VEDIK 111.22 2.7600000000000003e-05 40210000.0 2288.18 2834.4 1778.26 3640.5 31922.0 6510.4 4178.9 4916.6 30992.0 3903.7 3775.5 True False 2674.368843370082 2978.6588532987575 2030.4440074952215 4532.422663428254 27226.316086817715 7199.326206746235 4938.152037442242 5613.543106456011 23972.361484054254 3021.851458762603 2837.939151500938 0.9423629967385501 1.0495851722977907 0.7154642503245195 1.5970823972850625 9.593692688026161 2.5368148583942096 1.7400485964720338 1.9780350482451687 8.447102000539962 1.0648048803880792 1.0 11.470627941442881 -6.548370381606164 24.982813724963776 4.371097937446356 0.9570263383594724 0.16454609572758927 2.7347275013081895 270.81246518146423 265406.10099613236 0.45522420517769124 0.9476486424469233 2.8289783145216884e-07 6.548370381606164 -3.4140715990868835 T(ph)PKGPSSVEDIK ddPTM_A549_PD325901_60min_R1 2 TPKGPSSVEDIK 12 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 T(0.972)PKGPS(0.014)S(0.014)VEDIK;T(0.999)PKGPSSVEDIK 62.376999999999995 0.0030166999999999998 7693700.0 3428.8999999999996 3422.9 3534.5 4295.299999999999 4216.6 3811.3 3359.8 4446.7 4379.5 4420.1 4465.6 True False 3776.9994037772326 3711.359795668596 3774.3724246751167 4560.610925665923 3920.440562480301 3780.2620364324894 3487.6590275531034 4358.007080131336 4195.444845121497 4141.014131661013 3916.3595097707375 0.964415905729333 0.9476555424519384 0.9637451350568342 1.1645026240026926 1.0010420526255013 0.9652489836546657 0.890535973230218 1.1127699255542687 1.0712614188392262 1.0573631254561273 1.0 11.93529749065498 -8.282042658872093 24.954971272631223 1.0405253771432181 0.9897551001078926 0.1944713231668992 0.06894651825887452 1483.9131496279078 1797332.383655565 0.012032824174794787 0.014555010543590968 5.2234487879670746e-09 8.282042658872093 -0.05077027703532555 T(ph)PKTPKGPSSVEDIK ddPTM_A549_MK2206_60min_R1 1 TPKTPKGPSSVEDIK 15 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 T(0.566)PKT(0.418)PKGPS(0.008)S(0.008)VEDIK 56.327 0.0042893 9112700.0 2487.6 3361.1 3219.5 2917.9 2532.9 2081.4 1984.4 1302.6 2473.9 4399.7 3973.6 True False 2907.4460640191837 3532.1656335811635 3676.073511258684 3632.7856309895096 2160.31376531234 2301.652366478499 2344.939793510347 1487.247539045195 1913.565600006512 3405.8047142756423 2986.845454219076 0.973416974056111 1.182573952258492 1.2307545092652976 1.2162616669228765 0.7232760443834759 0.7705964040514028 0.7850890946493386 0.4979325384727823 0.6406644164677152 1.1402681412474034 1.0 11.54440687611062 -6.760873841178129 24.999782018637106 0.7868511398872512 1.1587393103980081 0.5003882565790396 0.1713309424892124 9.602145007942807 424428.00128162955 0.025172181218883677 0.05001162284358654 1.7343077261047775e-07 6.760873841178129 0.37188817051075695 T(ph)PKTPKGPSSVEDIK ddPTM_A549_PD325901_60min_R1 2 TPKTPKGPSSVEDIK 15 2 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 T(0.816)PKT(0.173)PKGPS(0.006)S(0.006)VEDIK;T(0.742)PKT(0.166)PKGPS(0.042)S(0.049)VEDIK 58.913999999999994 0.0026339 28428000.0 8183.099999999999 7230.9 9422.3 9149.5 8889.0 12059.2 10034.400000000001 11426.599999999999 9399.3 8914.4 11373.9 True False 9013.842287920172 7840.27331984576 10061.75393889273 9714.643834977844 8264.66730538524 11960.993873415015 10416.26458303437 11198.687499005706 9004.280107946217 8351.543262658983 9974.982405092574 0.9036449310745944 0.7859936991811663 1.0086989159756168 0.9739008491902884 0.8285395371891423 1.1990992452586695 1.0442388928642627 1.122677418788066 0.902686314849961 0.8372489217018799 1.0 13.284098581224331 -5.769832002113845 24.982649701053667 0.982471241182243 0.8448193084976464 0.20907571480274634 0.10851910729534657 183.69294541980477 546812.730642107 0.014030975954240294 0.044679629830367384 1.6989007101593985e-06 5.769832002113845 -0.13765193268459663 T(ph)PLGQR ddPTM_A549_MK2206_60min_R1 2 TPLGQR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PLGQR;T(1)PLGQR 88.954 0.040483 380860000.0 3975.2 4943.5 4210.1 3487.2 6447.4 5310.700000000001 4385.9 5439.700000000001 6981.2 6057.799999999999 6743.4 True False 4646.116575691051 5195.103034604293 4807.155486799247 4341.564156546359 5498.996000819137 5872.674749042649 5182.761257990842 6210.7941333825775 5399.969346685587 4689.338772675181 5068.827671627973 0.9166057472612482 1.0249121436270416 0.9483761923307438 0.8565223435879729 1.0848654476061534 1.1585863891002042 1.0224773051568896 1.2252920272169827 1.0653290457892524 0.9251328071228527 1.0 12.307436401141482 -6.782017763680255 24.998253591197972 1.058768124212337 0.9437526598344282 0.36444382020623134 0.08312174861145072 212.3698243451575 257982.67346236267 0.011397876738332507 0.02155729968930421 1.6518942304328096e-07 6.782017763680255 -0.11501546437790877 T(ph)PLGQR ddPTM_A549_PD325901_60min_R1 2 TPLGQR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PLGQR;T(1)PLGQR 82.241 0.044294 231835600.0 4948.429999999999 4666.64 4673.64 4775.49 5832.69 4683.59 4986.75 4737.98 4458.38 5372.07 4881.07 True False 5450.790970758371 5059.914130374504 4990.821315280414 5070.461171375308 5423.021976088135 4645.448395879315 5176.523500104308 4643.477272026592 4271.009793034086 5032.876583396801 4280.729333652059 1.2733323099659952 1.1820215052133864 1.165881074527678 1.1844853472783101 1.2668453325128923 1.085200215617487 1.2092620431313306 1.0847397511267218 0.9977294662053112 1.175705397636775 1.0 12.06364090287789 -8.485887050157983 2.2440348591939414 0.9980427027547838 1.193281653638588 0.3653008368086861 0.07189873703524749 0.0951255985032184 0.9461172685677848 0.007865683393994481 0.009352740744085807 3.266727810788055e-09 8.485887050157983 0.19523895088380416 T(ph)PLRQR ddPTM_A549_PD325901_60min_R1 1 TPLRQR 6 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PLRQR 53.553999999999995 0.034095 12493000.0 585.63 698.01 562.33 696.13 731.5 856.35 685.19 833.79 754.74 982.61 884.43 True False 645.0827264819802 756.8337523663084 600.4930953649903 739.1283690740624 680.1219635380027 849.3761695219379 711.2652804003548 817.1594043543988 723.0209024790499 920.5678369067281 775.6507168636982 0.831666512332171 0.9757404149982931 0.7741797722988663 0.9529139250495224 0.8768405014669993 1.0950498092186964 0.9169917141007972 1.0535146639953339 0.9321475333672686 1.1868329608834687 1.0 9.599263328670144 -7.131718843951508 22.45934826219274 0.9783581958250571 0.8853717094388527 0.3098209167052869 0.0939766307916998 6.150470673464137 1057.6501898339534 0.009452100081687672 0.016371532526099984 7.383820934591476e-08 7.131718843951508 -0.09298648638620444 T(ph)PLSPSPMK ddPTM_A549_MK2206_60min_R1 1 TPLSPSPMK 9 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.76)PLS(0.227)PS(0.013)PMK 60.973 0.008312100000000001 8796900.0 2605.9 2694.9 2430.5 2256.5 3564.0 2599.3 2095.9 2535.1 3841.0 3528.1 3333.5 True False 3045.7122118618686 2832.0588991514314 2775.181447154597 2809.342601298134 3039.7403212022527 2874.3562007243036 2476.697900230967 2894.4581884181416 2971.019632816614 2731.0997596281336 2505.6999500803527 1.2155135381489706 1.1302466199357242 1.1075473929213284 1.1211807707495243 1.2131302158124617 1.1471270535133822 0.9884255695305995 1.155149557442152 1.1857044706096351 1.0899548286060958 1.0 11.290997951337774 -10.897713177700865 1.0729601470199621 0.9975638207240265 1.1406514063844233 0.2081727460547047 0.06397426584018841 0.4144149490308216 0.8232920906431845 0.04577712396884227 0.010197883414072536 1.2655718966572026e-11 10.897713177700865 0.1430875856603968 T(ph)PMLPARNPPR ddPTM_A549_PD325901_60min_R1 1 TPMLPARNPPR 11 1 Q9NZP6 Q9NZP6 NPAP1 Nuclear pore-associated protein 1 1 T(1)PMLPARNPPR 52.555 0.006376 3703400.0 1690.4 1574.8 1598.4 1994.5 1750.2 2236.3 1353.7 1845.1 1749.4 2011.9 2007.9 True False 1862.0081635932925 1707.5139227610805 1706.8770359600242 2117.695735161847 1627.2719898622174 2218.0883142429034 1405.2157942730628 1808.2980330470511 1675.8788017023742 1884.868290646999 1760.9410291268061 1.0573938211415304 0.9696599116710806 0.9692982375488232 1.2025932158625119 0.9240922682511005 1.2596039717143632 0.7979913983660566 1.0268930095539472 0.9516950164613908 1.0703755886599136 1.0 10.782130881275366 -7.775690494236768 24.999999509006468 0.9689104108045009 1.0551622307193829 0.145968125714098 0.11262706063188262 344.6775725715558 604649.1284626221 0.015341452202367585 0.02125243907236949 1.6761369718822443e-08 7.775690494236768 0.08625181991488196 T(ph)PNGPNIDKK ddPTM_A549_MK2206_60min_R1 1 TPNGPNIDKK 10 1 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4;Q5TBM3 A0A0A0MSM0 HSPH1 Heat shock protein 105 kDa 1 T(1)PNGPNIDKK 42.095 0.050443 6845000.0 2069.4 2583.8 2410.0 2054.3 3219.6 2420.1 2437.9 2437.9 4129.9 3340.4 3465.8 True False 2418.6641280275367 2715.3043836979023 2751.774238898409 2557.6035922210317 2746.001104978329 2676.193375667636 2880.8348733112634 2783.4797907556263 3194.4842440951124 2585.8013199914444 2605.1462087861087 0.9284178062138535 1.0422848339721873 1.0562839926671996 0.9817504996822309 1.0540679427961368 1.0272718539335388 1.1058246418551743 1.0684543467725804 1.2262207139550956 0.992574355815646 1.0 11.347148627903449 -7.652723170401066 1.7524126986919242 1.1069724059159713 1.013287956682839 0.11638198571049041 0.06940955306866778 0.4443318712152977 2.775370023149045 0.01394837621711797 0.022454515369629943 2.2247275328568787e-08 7.652723170401066 -0.09368444923313235 T(ph)PNKFK ddPTM_A549_PD325901_60min_R1 2 TPNKFK 6 1 F8W8D3;Q14493;E7EUV9;H0YAE8;Q14493-2;H7C4H8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 T(1)PNKFK;T(1)PNKFK 69.344 0.020683 158502000.0 13603.4 13192.4 14282.7 13794.5 15903.6 11639.0 13592.9 12796.9 13615.3 13772.0 14122.3 True False 14984.407153706212 14304.169846731831 15252.009910852255 14646.554935417449 14786.586000441526 11544.215842898153 14110.185247820289 12541.655790526156 13043.09628948115 12902.433569655783 12385.346628635636 1.2098496394974847 1.1549268886556445 1.2314560398001884 1.1825712573561542 1.1938774459694237 0.9320866172778127 1.1392644607294822 1.0126204915031707 1.0531070853781968 1.0417498965934964 1.0 13.596346625397814 -7.2376742124571924 24.264526930047612 1.0283276519070887 1.1937221427710412 0.7346452695433138 0.04929138333212747 202.3554568921299 206607.34686618438 0.006786950336366091 0.01175065217202168 5.78529870898651e-08 7.2376742124571924 0.16539449086395241 T(ph)PPGEVVWVER ddPTM_A549_MK2206_60min_R1 1 TPPGEVVWVER 11 0 A0A494C030 A0A494C030 1 T(1)PPGEVVWVER 46.158 0.03954 1246300.0 436.44 543.59 337.96 155.4 466.28 500.15 523.87 310.88 475.74 364.82 638.54 True False 510.1004020664625 571.2564091393846 385.88780986643394 193.47300697617115 397.6908296773809 553.0755410272997 619.0503979168838 354.9481920300706 367.9856496006704 282.4069086215059 479.9728951925329 1.0627691837928566 1.1901847268067811 0.8039783365509455 0.4030915264466398 0.8285693497709992 1.152305779278313 1.289761159676657 0.7395171593756126 0.76668006315869 0.5883809511956362 1.0 8.90680912670138 -11.297284848567854 1.8648373122361401 1.000348654006724 0.8889864259667389 0.0 0.26978749041889905 1.4700917002875868 9.235199531430947 0.19425073918961375 0.03838037773597719 5.04330404767214e-12 11.297284848567854 -0.11136222803998497 T(ph)PPGEVVWVER ddPTM_A549_PD325901_60min_R1 1 TPPGEVVWVER 11 0 A0A494C030 A0A494C030 1 T(1)PPGEVVWVER 45.257 0.050012 2365400.0 1195.3 1032.5 1148.2 1017.2 1175.4 882.88 847.22 1372.1 1160.2 1277.7 1328.4 True False 1316.6459760666482 1119.5123985590653 1226.1237566875009 1080.0301337711858 1092.8439589098673 875.690117997931 879.4614207165727 1344.7323891083731 1111.4408287041815 1197.0258039463538 1165.0152214214097 1.1301534536692466 0.9609422932630637 1.0524529930102835 0.9270523800139405 0.9380512278427677 0.7516555165086346 0.754892643929202 1.1542616477299708 0.9540139976438563 1.0274765358738307 1.0 10.186133089091621 -2.4737190572831667 1.0565405812591264 0.955575245253567 81.27087543854573 0.17348515639707063 0.11225867966926684 1065.2025822386167 3.2887453991784916 0.016574981341055398 206230.24020366982 0.0033595487132663296 2.4737190572831667 80.31530019329216 T(ph)PPITTK ddPTM_A549_MK2206_60min_R1 1 TPPITTK 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(1)PPITTK 56.729 0.0391 22896000.0 6017.2 6207.6 6203.2 5606.5 10317.0 6895.0 6665.0 7354.9 10310.0 8484.2 8410.0 True False 7032.7562535842635 6523.540325196643 7082.907036819335 6980.0927516853535 8799.382966847257 7624.624323469421 7875.944226842604 8397.479598436592 7974.801461686872 6567.613327467191 6321.564895807944 1.1125024213937813 1.03195022636288 1.1204357075439129 1.1041716515975504 1.3919627674284327 1.2061292495036446 1.2458852130214506 1.3283862044990256 1.2615233084097972 1.0389220763710598 1.0 12.626066024703253 -6.548361425950336 24.98041864982634 1.1759452636054586 1.0876016351830065 0.16611503098486402 0.11182590694136915 455.17819008281475 446205.4551511273 0.019791503189820755 0.04120046704291435 2.829036651936526e-07 6.548361425950336 -0.08834362842245214 T(ph)PPITTK ddPTM_A549_PD325901_60min_R1 1 TPPITTK 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(1)PPITTK 56.729 0.0391 35001000.0 11401.0 11999.0 12715.0 12003.0 14308.0 12824.0 12819.0 12954.0 12176.0 14996.0 15306.0 True False 12558.421127027395 13010.197840494164 13577.916361506328 12744.398049209149 13303.055439920352 12719.565595783642 13306.834059825962 12695.622307783584 11664.285063180578 14049.150000766636 13423.45903272817 0.9355577497877635 0.9692135096306831 1.0115065221565895 0.9494123696535014 0.9910303601691444 0.9475624401111262 0.9913118539254405 0.9457787502334515 0.8689477901889153 1.0466117538343098 1.0 13.712468860799904 -8.504695710240235 24.027857299249384 0.9364957670686436 0.9711642984095871 0.0 0.048101174379396684 852.8250158275414 1126961.2429341539 0.008187722990195002 0.009798098872379986 3.128270431711721e-09 8.504695710240235 0.0346685313409435 T(ph)PPPPSSTFPK ddPTM_A549_MK2206_60min_R1 2 TPPPPSSTFPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(0.999)PPPPSSTFPK;T(1)PPPPSSTFPK 76.465 0.0013015000000000001 8407500.0 5547.0 6793.3 5989.5 5931.8 9944.099999999999 6826.1 7000.6 6246.5 11108.7 9431.3 10873.3 True False 6483.19798887056 7139.049953469677 6838.901163436524 7385.09126628862 8481.33606286962 7548.433371201536 8272.518402765838 7131.96050410395 8592.59718694868 7300.762779677674 8173.159522186499 0.7932303255884773 0.8734749314619795 0.8367512153496998 0.9035785055022328 1.037705925088891 0.923563690481128 1.0121567284120203 0.8726075252469799 1.0513189132823841 0.8932607714139611 1.0 12.996678177700478 -5.524698540849309 0.3916531907000552 1.0204149133522564 0.6663431226681331 0.34348625864423343 0.06639105538332807 2.1592783349043185 0.25381893635101305 0.014270148579159602 0.3439846117253566 2.9874555978974157e-06 5.524698540849309 -0.3540717906841233 T(ph)PPPPSSTFPK ddPTM_A549_PD325901_60min_R1 1 TPPPPSSTFPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(1)PPPPSSTFPK 96.331 0.00029907 9341000.0 3651.4 4062.4 3977.9 4607.0 4526.5 4180.5 4413.5 4980.1 4787.3 4852.1 5746.1 True False 4022.087439981394 4404.752704994042 4247.864215055922 4891.563926743863 4208.574255577262 4146.4553940403575 4581.4581576598675 4880.767998687126 4586.106429284199 4545.737577935434 5039.36612752903 0.7981336021626907 0.8740688002270317 0.8429362160948588 0.9706704777853402 0.8351396086477383 0.8228128873965155 0.9091338159837793 0.9685281591318571 0.9100562081074512 0.9020455078869933 1.0 12.299026561605164 -14.999999999564466 0.060627914254960696 1.4648731644513986 0.6874817346958866 0.2793921825059015 0.05365631990556234 144.9369533863849 0.664008256845502 9.971496629402163 1.7386078429804417 1.0000000010028547e-15 14.999999999564466 -0.777391429755512 T(ph)PPRDLPTIPGVTSPSSDEPPMEASQSHLR ddPTM_A549_MK2206_60min_R1 3 TPPRDLPTIPGVTSPSSDEPPMEASQSHLR 30 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 T(0.823)PPRDLPT(0.167)IPGVT(0.005)S(0.005)PSSDEPPMEASQSHLR;T(0.99)PPRDLPT(0.01)IPGVTSPSSDEPPMEASQSHLR;T(0.74)PPRDLPT(0.228)IPGVT(0.012)S(0.005)PS(0.008)S(0.008)DEPPMEASQSHLR 100.17 1.1899e-11 21979900.0 4279.01 4977.889999999999 5216.5 5725.799999999999 7250.700000000001 5275.1900000000005 4902.04 5371.9 7652.3 7318.400000000001 7382.2 True False 5001.20227624969 5231.243338712723 5956.278139922634 7128.621257040924 6184.131634944211 5833.407104412277 5792.677214966463 6133.383275753784 5919.06626821207 5665.168357150456 5548.996001644873 0.901280569452059 0.9427369090123764 1.073397446701535 1.2846686598670836 1.1144595586500814 1.0512545157147521 1.0439144690768125 1.105314055720293 1.0666913918225023 1.0209357432355595 1.0 12.43801104811082 -5.688973044725848 4.673943861801004 1.0636567529458214 0.9132821933346783 0.39876563395481857 0.07387340944518789 0.1842243588237242 7.41841027369499 0.011364200603477223 0.0468394910218318 2.0465716569619416e-06 5.688973044725848 -0.1503745596111431 T(ph)PPRESLR ddPTM_A549_PD325901_60min_R1 1 TPPRESLR 8 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 T(1)PPRESLR 41.283 0.035844 2001000.0 112.51 180.59 225.75 389.14 223.63 165.05 330.39 283.22 217.84 216.83 210.75 True False 123.93193237451565 195.80895308066013 241.07075254502982 413.1762939989375 207.92300028161787 163.70588752215306 342.96317224634527 277.57095491820814 208.68494235900596 203.13931679556066 184.82908605432257 0.6705218048748626 1.0594055149042423 1.3042901292828848 2.235450614507189 1.124947402599328 0.8857149651978409 1.8555692697930994 1.5017709649693776 1.1290698169533337 1.0990657430176145 1.0 7.530047997418357 -8.934878390476262 5.395913222958435 1.0554221286112344 1.3458244263919437 0.07001659379540237 0.4135925434571475 0.3850975423261991 20.55020453289249 0.07391289918145649 0.07758550796327444 1.1617738838948942e-09 8.934878390476262 0.29040229778070925 T(ph)PPRWAEDQNSLLK ddPTM_A549_MK2206_60min_R1 2 TPPRWAEDQNSLLK 14 1 P49792;Q7Z3J3;J3KNE0;A6NKT7 P49792;J3KNE0 RANBP2;RGPD4;RGPD3 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3 1 T(1)PPRWAEDQNSLLK;T(1)PPRWAEDQNSLLK 88.385 3.0342e-05 35380000.0 5093.0 5721.4 5217.4 4253.5 11580.400000000001 8483.9 6961.7 7737.0 13684.4 9628.6 10019.7 True False 5952.57388810488 6012.59482192475 5957.30577345583 5295.607690946873 9876.938500463122 9381.660666842965 8226.55077629559 8833.74344356876 10584.90524949639 7453.492572646879 7531.531960348021 0.7903536650237916 0.7983229512375218 0.7909819416315073 0.7031249045781346 1.3114116161842222 1.2456510463257002 1.092281201169523 1.1729012756072226 1.4054119806201124 0.9896383115530807 1.0 12.878727632534378 -6.757914016550301 24.999998747073032 1.197595863930274 0.7741181801828326 0.720972254491188 0.12008193919940525 43.774837872061774 310422.9412749747 0.02150935659377183 0.04340634431333234 1.7461678323578199e-07 6.757914016550301 -0.4234776837474413 T(ph)PPRWAEDQNSLLK ddPTM_A549_PD325901_60min_R1 2 TPPRWAEDQNSLLK 14 1 P49792;Q7Z3J3;J3KNE0;A6NKT7 P49792;J3KNE0 RANBP2;RGPD4;RGPD3 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3 1 T(1)PPRWAEDQNSLLK;T(1)PPRWAEDQNSLLK 101.61 1.1537e-05 37718000.0 10338.1 10092.3 9560.0 10636.2 10140.6 10811.900000000001 9444.6 9731.3 12932.7 13513.0 14553.1 True False 11387.616301493019 10942.813539929932 10208.7990889501 11293.173917437178 9428.359239170837 10723.851471074027 9804.01942128343 9537.201587442833 12389.183593675718 12659.786873856992 12763.16095970184 0.8922253928668659 0.8573748755876826 0.7998644788060862 0.884825785171403 0.7387166289714404 0.8402190887455945 0.768149790811105 0.7472444810149625 0.9706986876364788 0.9919005890334504 1.0 13.639698054744027 -8.83585316034639 7.179050355665347 0.9868370194482591 0.8159933312713418 0.7082632050395142 0.04904390350952934 0.08410733705659368 6.796947824586561 0.008463538211795352 0.008996761986251494 1.459307584522666e-09 8.83585316034639 -0.1708436881769173 T(ph)PPSSPK ddPTM_A549_MK2206_60min_R1 1 TPPSSPK 7 0 C9J4Q7;Q9BSE4 C9J4Q7 HERPUD2 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein 1 T(1)PPSSPK 68.422 0.024142 7729500.0 2271.0 2461.1 2624.4 1908.3 3111.2 2202.0 2072.4 2790.0 3679.9 3226.3 3786.4 True False 2654.2892793807555 2586.3594777919748 2996.5793828070455 2375.8335856668414 2653.5466013817195 2435.014178430699 2448.9282544198963 3185.4910440166545 2846.4085255927757 2497.4765892373357 2846.1323806762416 0.9325951587501689 0.9087277511587339 1.0528601561727278 0.8347586365966374 0.932334215863577 0.8555519746597798 0.8604407409320962 1.1192350242190003 1.0000970246213454 0.8774983926235838 1.0 11.474787051411747 -8.237112047394028 24.999918247083617 1.0089862982286453 0.912155333834835 0.2379856693864456 0.07514035001861284 649.9305912277317 667900.3156947722 0.009878171632760927 0.01274922341889774 5.792792238827893e-09 8.237112047394028 -0.09683096439381023 T(ph)PPSSPK ddPTM_A549_PD325901_60min_R1 2 TPPSSPK 7 0 C9J4Q7;Q9BSE4 C9J4Q7 HERPUD2 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein 1 T(0.999)PPS(0.001)SPK;T(0.999)PPS(0.001)SPK 58.981 0.0333 23750000.0 9429.7 9110.8 8827.3 9087.0 10101.3 9891.0 9706.2 8748.0 10247.5 10530.2 10646.6 True False 10386.996202221759 9878.599090355376 9426.373660867073 9648.283351925647 9391.8195355932 9810.4509753506 10075.574752436445 8573.514277326756 9816.833211641175 9865.321374904826 9337.135694358007 1.112439247134229 1.0579903102751895 1.0095573170863297 1.0333236730998407 1.0058565970363091 1.050691699948047 1.0790862510999644 0.9182167377633088 1.051375232510868 1.0565682772358098 1.0 13.188764334243082 -5.399992902441742 2.5501023096000415 1.0217079861935934 1.1191853400441754 0.30089970276443745 0.0404952422482253 0.33190492881444805 3.26182232433151 0.005268664498924645 0.06003334850904364 3.981136767653944e-06 5.399992902441742 0.09747735385058198 T(ph)PPTANHPVEPVTSVTQPSELLQQK ddPTM_A549_MK2206_60min_R1 2 TPPTANHPVEPVTSVTQPSELLQQK 25 0 O95487-2;O95487;O95487-3 O95487-2 SEC24B Protein transport protein Sec24B 1 T(0.959)PPT(0.041)ANHPVEPVTSVTQPSELLQQK;T(0.814)PPT(0.159)ANHPVEPVT(0.022)S(0.005)VTQPSELLQQK 65.301 0.00021993 5632100.0 2262.7 2174.1000000000004 2555.3999999999996 2067.0299999999997 3486.0 2852.6 2567.5099999999998 2644.4 4060.9 3670.2 3955.3 True False 2644.5884422962704 2284.752403668088 2917.794145261822 2573.452442792502 2973.2140178762766 3154.4602385973685 3033.993332612248 3019.251798135355 3141.112633924755 2841.0992709353973 2973.089849273381 0.8895084159473364 0.7684774155838171 0.9814012670942074 0.8655817931037134 1.0000417641609203 1.0610040054350576 1.020484911801018 1.015526590584962 1.0565145330849783 0.9556049144057177 1.0 11.537747348022823 -6.579255407427391 1.2178864091879924 1.0289931686465932 0.8494627378643816 0.5799327398463029 0.05535431854861526 0.204390138788572 0.5809392798333666 0.00742250191944626 0.025075239475939787 2.634781422172747e-07 6.579255407427391 -0.17953043078221154 T(ph)PPTANHPVEPVTSVTQPSELLQQK ddPTM_A549_PD325901_60min_R1 1 TPPTANHPVEPVTSVTQPSELLQQK 25 0 O95487-2;O95487;O95487-3 O95487-2 SEC24B Protein transport protein Sec24B 1 T(0.949)PPT(0.048)ANHPVEPVT(0.002)S(0.001)VTQPSELLQQK 75.141 5.7359000000000004e-06 5559900.0 1853.9 1794.5 1344.5 1362.3 2164.4 1956.6 1715.7 1903.9 1775.1 1837.9 1956.6 True False 2042.1065632309521 1945.7288127982983 1435.7458551352931 1446.4461769922202 2012.3800107746438 1940.6660983086622 1780.9919023670639 1865.925220919343 1700.4987200765313 1721.8546803420245 1715.9506039093117 1.1900730467290759 1.133907239733767 0.8367058188413753 0.8429416171403179 1.1727493822899102 1.1309568549860347 1.037903945666952 1.0874003113308486 0.9909951464817358 1.0034407030244705 1.0 10.744792308058534 T(ph)PPVALNSSR ddPTM_A549_MK2206_60min_R1 2 TPPVALNSSR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PPVALNSSR;T(1)PPVALNSSR 70.345 0.0033494999999999996 84327000.0 2817.12 2956.9 2482.7 2298.3 4746.4 3488.3 3681.0 3500.3 5669.8 4079.7000000000003 3910.9 True False 3292.5809840286697 3107.3935800589534 2834.7841920801143 2861.383603174608 4048.210847518058 3857.429590653864 4349.790052364233 3996.4782442191727 4385.59935281011 3158.092936525294 2939.715594651042 1.120033852941313 1.0570388461091302 0.9643055937921833 0.9733538878322234 1.3770756786418312 1.3121778166815348 1.4796635634681434 1.3594778527184612 1.4918447760014353 1.0742851935308302 1.0 11.521460871685015 -6.755397363412508 24.96343435503995 1.2805713469915698 1.0261100382812516 0.43532075094507305 0.1472376179066956 151.8350495539948 627320.9161575502 0.02837183106303346 0.057879383189542694 1.7563159143768187e-07 6.755397363412508 -0.25446130871031825 T(ph)PPVALNSSR ddPTM_A549_PD325901_60min_R1 2 TPPVALNSSR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PPVALNSSR;T(0.999)PPVALNSSR 63.076 0.0071197000000000005 80220000.0 6961.0 7253.7 6677.1 6735.9 7777.799999999999 7276.9 6953.4 7185.4 7686.1 8144.2 9341.4 True False 7667.675595582646 7864.994755862368 7130.248158664088 7151.9612446611645 7231.51415995335 7217.639339048504 7218.01544204648 7042.081560162743 7363.079946132738 7629.973822102135 8192.467020013513 0.9359421987114692 0.9600276371755714 0.8703420033605856 0.8729923754577857 0.8827028710994337 0.8810092639270214 0.881055172320312 0.8595800926582341 0.8987622322000623 0.9313401937978811 1.0 13.000082244659756 -10.419394133834182 0.8020158221464709 0.9992243933111181 0.8925130289245801 0.34032976760395917 0.034324414811598765 0.32090500987212167 0.37830455641168476 0.019758435486130863 0.006062449655322789 3.807201528642679e-11 10.419394133834182 -0.10671136438653805 T(ph)PPVVIK ddPTM_A549_MK2206_60min_R1 4 TPPVVIK 7 0 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 T(1)PPVVIK;T(1)PPVVIK;T(1)PPVVIK;T(1)PPVVIK 75.38 0.019244 367336000.0 19724.8 19791.36 19202.4 15950.7 37288.2 26050.2 22184.5 25920.660000000003 42110.3 26014.7 26727.5 True False 23053.864014940325 20798.65568826662 21925.5890643248 19858.622216054126 31803.15517537985 28806.81487327674 26215.13648918073 29594.992933692007 32572.384286331 20137.96120200618 20090.32410852636 1.1475108062172195 1.035257349553641 1.0913506893111569 0.9884669908150511 1.583008566889299 1.4338651142542338 1.3048637915231538 1.4730968387479548 1.6212971035398693 1.0023711460911475 1.0 14.294213218184714 -6.737692426601201 24.999944304334857 1.3419168937581278 1.0653117595599897 0.32724272170647195 0.19298042114285024 276.9554877841876 291567.2957217679 0.0343898812069763 0.07155709590550302 1.8293953607341775e-07 6.737692426601201 -0.27660513419813815 T(ph)PPVVIK ddPTM_A549_PD325901_60min_R1 2 TPPVVIK 7 0 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 T(1)PPVVIK;T(1)PPVVIK 69.423 0.023344 489830000.0 15880.2 16064.3 15138.5 15593.800000000001 18785.9 14730.4 16198.400000000001 16087.6 16264.300000000001 18392.3 19827.9 True False 17492.346213614645 17418.094938665745 16165.889645195723 16556.99360991066 17466.443191836715 14610.440506248564 16814.838976104584 15766.720197521941 15580.768031626798 17231.007039150452 17389.193999414012 1.0059319721318947 1.0016620056831103 0.9296514631868784 0.9521426703542789 1.0044423676235543 0.8402022834836917 0.966970578203407 0.9066964344669025 0.8960028873190928 0.9909031459267813 1.0 14.085903443879026 -5.751729275226418 23.917680565077028 0.9433137284711565 1.0037970663887668 0.1995377127859057 0.046961570505649565 154.70775755363184 381056.9842386344 0.006882442753951953 0.025935064580957047 1.7712127295153342e-06 5.751729275226418 0.06048333791761029 T(ph)PQSPTLPPAK ddPTM_A549_MK2206_60min_R1 1 TPQSPTLPPAK 11 0 P78310-7;P78310-2;P78310-6;P78310 P78310-7 CXADR Coxsackievirus and adenovirus receptor 1 T(0.611)PQS(0.33)PT(0.059)LPPAK 74.76 0.0014623 4289000.0 2739.1 2734.7 3086.0 2577.8 4368.9 2875.5 2612.7 2825.3 5092.8 4290.9 4609.4 True False 3201.3931154345332 2873.884549151889 3523.641203834225 3209.3611157218393 3726.240597446834 3179.7835013975823 3087.3937706634138 3225.7949271183707 3939.2889315304446 3321.582709840526 3464.7587670317616 0.9239873049450851 0.8294616573303107 1.0169946714220763 0.9262870322343625 1.0754689858650917 0.9177503298798733 0.8910847704725965 0.9310301651626645 1.1369590775017246 0.9586764716338697 1.0 11.758539193237478 -8.741933891869236 24.981688974020667 1.064675120129606 0.9397747159316738 0.20471216530904301 0.07419373152012423 188.75910311717482 241753.36611797998 0.012808831130518733 0.014513335670794216 1.811615835063656e-09 8.741933891869236 -0.12490040419793225 T(ph)PRSPLSGIPVR ddPTM_A549_PD325901_60min_R1 1 TPRSPLSGIPVR 12 1 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 T(0.597)PRS(0.403)PLSGIPVR 73.887 0.00054346 21694000.0 1150.4 1094.8 1466.0 1026.4 1421.5 1453.7 1333.6 1235.7 1372.8 1141.3 1473.5 True False 1267.1877611202806 1187.0626382009334 1565.4915757741458 1089.7983968764702 1321.658743908777 1441.8615491726987 1384.350877773921 1211.052994112103 1315.105990040596 1069.2381232245234 1292.2688412860941 0.9805914378150198 0.9185879905759724 1.211428710310878 0.8433217315615836 1.022742870278783 1.1157597421738705 1.0712560989988622 0.9371525145702938 1.0176721344854016 0.8274115176841951 1.0 10.335690521600275 T(ph)PRT(ph)PQLK ddPTM_A549_MK2206_60min_R1 1 TPRTPQLK 8 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 T(1)PRT(1)PQLK 46.73 0.010412000000000001 15279000.0 2430.8 2938.6 2313.5 2807.7 4031.8 2970.9 2276.6 3174.1 4148.6 3280.6 3303.0 True False 2841.0596126458554 3088.162188224573 2641.5890878387836 3495.586626042444 3438.7275608931627 3285.2786660761867 2690.2287512122807 3624.03839527357 3208.9487239528776 2539.510181524348 2482.7739418375304 1.1443086157667475 1.2438354278597703 1.0639668168434666 1.4079359248693093 1.385034498287073 1.3232290748326097 1.0835576714733886 1.459673123760666 1.2924852600869077 1.0228519555206972 1.0 11.27773719384627 -10.636321942155428 0.9175011009706986 1.000341766768558 1.2692159612495124 0.3876119190793297 0.12315355320298436 0.4654332300486114 0.700286008744359 0.08170763259135855 0.022188205417361436 2.3103514934892323e-11 10.636321942155428 0.2688741944809545 T(ph)PRT(ph)PQLK ddPTM_A549_PD325901_60min_R1 2 TPRTPQLK 8 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 T(1)PRT(1)PQLK;T(1)PRT(1)PQLK 66.267 0.0022834 45528000.0 6828.3 6934.7 6992.4 6834.700000000001 8040.0 7441.0 7265.900000000001 8083.8 8026.4 8890.3 8717.2 True False 7521.503989271224 7519.111506331765 7466.946312717018 7256.86389627008 7475.298136494249 7380.402963055689 7542.407800553044 7922.56226738158 7689.078320557864 8328.964940771912 7645.0396628837 0.9838410683188165 0.9835281225337116 0.9767047186123421 0.9492251467970539 0.9777971686381776 0.9653845223180713 0.9865753656153115 1.0363010025762507 1.0057604223936167 1.0894600038778917 1.0 12.900308271048322 -8.006151780756177 23.123317108850916 1.0056063571501896 0.9728607110833901 0.39466059049191027 0.02843347981923639 55.73943042507311 209515.7352883152 0.0020773420443890977 0.0028142444464457294 9.859348529072488e-09 8.006151780756177 -0.03274564606679953 T(ph)PRTPQLK ddPTM_A549_MK2206_60min_R1 1 TPRTPQLK 8 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 T(0.785)PRT(0.215)PQLK 53.597 0.0097839 361180000.0 7481.7 7745.8 8619.2 6777.3 10031.0 7992.2 7846.6 8323.1 11927.0 11481.0 12816.0 True False 8744.42804999691 8140.028135013239 9841.532165939076 8437.738804244553 8555.453187985351 8837.92929920701 9272.225651964456 9502.924913424737 9225.55354350527 8887.434126099206 9633.433496394126 0.9077166571264568 0.8449768338630375 1.021601713410161 0.875880734257715 0.8881000934077895 0.917422568237495 0.9625047658693162 0.9864525370919683 0.9576599606940216 0.9225614241719576 1.0 13.233834371969456 -7.812004265607511 3.0489983599971455 0.9797993821655123 0.9081522395405919 0.26438208876759617 0.045272958443230794 0.196684621621068 3.745633172765959 0.006518448974603825 0.0094478885314067 1.5416853105588313e-08 7.812004265607511 -0.07164714262492045 T(ph)PRTPRT(ph)PQLK ddPTM_A549_MK2206_60min_R1 1 TPRTPRTPQLK 11 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 T(0.929)PRT(0.202)PRT(0.87)PQLK 54.281000000000006 0.009266 70070000.0 3197.0 4105.5 3592.6 3552.1 4713.9 4135.7 4249.9 3742.3 4888.1 6245.9 5871.9 True False 3736.5754408543694 4314.452413991691 4102.084701521337 4422.364659459828 4020.4915544655687 4573.337028944522 5022.0518184033535 4272.782485313088 3780.9531546917183 4834.946852034057 4413.745173804358 0.8465770663496839 0.9775037398167046 0.9293886574755763 1.0019528734251868 0.9109025093535632 1.0361579223212396 1.137820970773144 0.9680627940806629 0.8566315013226704 1.0954295414990283 1.0 12.107787623137515 -4.021613493618308 12.311111047201255 0.9530345808460495 0.5678365233024811 0.0 0.09031065515165079 0.0 0.0 0.0115106599325183 0.0 9.514511741100834e-05 4.021613493618308 -0.3851980575435684 T(ph)PRTPRT(ph)PQLK ddPTM_A549_PD325901_60min_R1 1 TPRTPRTPQLK 11 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 T(0.767)PRT(0.501)PRT(0.731)PQLK 40.242 0.049241 103670000.0 4881.4 5601.3 6327.8 5687.5 6118.7 6327.3 6142.3 6723.3 6545.4 6588.6 7894.9 True False 5376.956134503246 6073.341208764062 6757.242560152557 6038.803957750316 5688.943620369071 6275.772566609626 6376.048587695532 6589.198507173184 6270.319600241637 6172.594671582493 6923.877349894524 0.7765816554484688 0.8771589821498761 0.9759333128937495 0.8721708448290623 0.8216413048471656 0.9063956869058677 0.9208783266203672 0.9516630890744421 0.9056081272637155 0.8914939360785361 1.0 12.757364453580077 -14.999999999612761 0.07969977857858358 1.3676352319151208 0.7771572355644087 0.173540793287843 0.05596267311549601 106.50864655825565 0.6278815552059239 6.954554796067369 0.7212815867195917 1.00000000089165e-15 14.999999999612761 -0.5904779963507121 T(ph)PS(ph)PESHR ddPTM_A549_MK2206_60min_R1 2 TPSPESHR 8 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 T(1)PS(0.986)PES(0.014)HR;T(0.998)PS(0.978)PES(0.024)HR 68.657 0.011346 50206000.0 435.78999999999996 465.56999999999994 569.23 310.19 634.96 471.17 397.27 460.45000000000005 588.14 715.71 648.3299999999999 True False 509.34069795743653 489.2655243897484 649.9553734473612 386.1865639249584 541.5582251264261 521.0288966626667 469.44881665382746 525.7201975689851 454.92722906658724 554.0306139178169 487.3317680022784 1.0451621080344904 1.0039680491083047 1.3337020406277362 0.7924510349654712 1.1112721572542634 1.0691461769433237 0.9633043595295283 1.078772680311962 0.93350620447231 1.1368653765153818 1.0 8.928760461238852 -7.674322458202307 0.6791056065574588 0.9714649946949903 1.0728867518789826 0.0 0.1325906989417909 1.2222219182109018 1.1358978715016865 0.024678171604996326 0.05062334957311182 2.116788862460187e-08 7.674322458202307 0.10142175718399238 T(ph)PS(ph)PESHR ddPTM_A549_PD325901_60min_R1 2 TPSPESHR 8 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 T(1)PS(0.936)PES(0.064)HR;T(1)PS(0.947)PES(0.053)HR 65.347 0.013722999999999999 68894000.0 564.3299999999999 678.13 532.95 497.26 737.44 494.89 451.40999999999997 578.59 527.95 528.6800000000001 752.73 True False 621.6203661622114 735.2783949974423 569.1191918886984 527.9746208406017 685.6447584298903 490.8597799202565 468.58865457103013 567.0495685549256 505.76209749558 495.2990545749065 660.1489819486127 0.9416364838241917 1.113806754389084 0.8621072022390845 0.7997810119802627 1.0386212463829299 0.7435590955110585 0.7098225815449428 0.8589721169926243 0.7661332688913387 0.750283751272166 1.0 9.36664783737214 -5.781402793031592 24.321125662894804 0.8663290528146304 1.0277215895137073 0.2850867436085699 0.10868924818540092 171.0675904168753 208409.94303398076 0.016332575065390268 0.05088633354586049 1.654235006319079e-06 5.781402793031592 0.16139253669907694 T(ph)PS(ph)PPPR ddPTM_A549_MK2206_60min_R1 3 TPSPPPR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)PS(1)PPPR;T(1)PS(1)PPPR;T(1)PS(1)PPPR 87.30799999999999 0.019726 15690200.0 2683.92 2985.8500000000004 2446.21 2009.8300000000002 2700.8900000000003 1947.12 2093.8 2166.67 3159.96 3373.16 3474.67 True False 3136.9000804560064 3137.8170114035033 2793.1193613840987 2502.2384402246976 2303.592658847347 2153.1629460063477 2474.2163574138094 2473.802107648588 2444.234105419208 2611.1608132386355 2611.8135429865624 1.2010428879501929 1.201393958550144 1.069417596399403 0.9580463532490272 0.8819897059777206 0.8243938208331074 0.9473173780179526 0.9471587718393707 0.9358379015924199 0.9997500856254921 1.0 11.350836191419955 -5.98404565489484 2.3830546392405467 0.9484735544302694 1.2064700673110906 0.8193407262230891 0.04827567180857579 0.10529460652845281 1.1715751746556704 0.007919089567438881 0.030820068766276763 1.037419352122751e-06 5.98404565489484 0.25799651288082126 T(ph)PS(ph)PPPR ddPTM_A549_PD325901_60min_R1 4 TPSPPPR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)PS(1)PPPR;T(1)PS(1)PPPR;T(1)PS(1)PPPR;T(1)PS(1)PPPR 88.37 0.019521 30458000.0 3054.3199999999997 3780.3 3542.66 3207.88 3962.52 3600.9300000000003 3649.6099999999997 3629.51 3439.02 4409.58 4292.379999999999 True False 3364.3923179284566 4098.879147964006 3783.0862113451835 3406.023461975928 3684.2062651518863 3571.6052199645374 3788.4979056932193 3557.1165757544877 3294.489948914198 4131.158366256371 3764.4444716386843 0.8937287674916659 1.0888403797279922 1.0049520559665432 0.9047878080383177 0.9786852463646861 0.9487735167494175 1.006389637099379 0.9449247033802187 0.8751596613351259 1.0974151424945986 1.0 11.878221263199237 -6.226653406042808 21.789291516463734 0.9461130375707738 1.005140517583807 0.0 0.07176937644602804 195.26015353796637 122305.15173542727 0.00846850301576419 0.022402471771218374 5.93398704665539e-07 6.226653406042808 0.05902748001303326 T(ph)PS(ph)PSYQR ddPTM_A549_MK2206_60min_R1 2 TPSPSYQR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 T(0.989)PS(0.633)PS(0.369)Y(0.009)QR;T(1)PS(0.753)PS(0.248)YQR 63.426 0.015103 24109000.0 1271.79 1547.7 1257.56 1200.48 1899.06 1137.59 1277.13 1182.37 1888.96 2122.23 1858.37 True False 1486.4370597197935 1626.471319238812 1435.9009177880012 1494.597653891595 1619.7107896695693 1257.9690187288722 1509.1679895615146 1349.9745683562614 1461.1135760492757 1642.816769047253 1396.8854405972186 1.0641080624938637 1.1643555526954574 1.0279303341969848 1.0699500549254783 1.1595158361569613 0.900552745535844 1.0803806423211708 0.9664175236725919 1.04597952959163 1.176056905815333 1.0 10.447997993985544 -7.235952760033439 24.99752018532744 1.0149267045362227 1.0955452949459046 0.1610740435361464 0.07502186476363776 666.3319215538094 653545.1184114086 0.007737007973573085 0.013397754544307517 5.80827593050785e-08 7.235952760033439 0.08061859040968189 T(ph)PS(ph)PSYQR ddPTM_A549_PD325901_60min_R1 2 TPSPSYQR 8 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 T(1)PS(0.931)PS(0.069)YQR;T(1)PS(0.679)PS(0.321)YQR 68.626 0.011368000000000001 32389000.0 4368.6 5072.700000000001 5491.7 5791.3 5262.6 6246.2 5044.4 5901.9 5557.700000000001 5837.200000000001 7813.3 True False 4812.097056006657 5500.1942316422 5864.3997862748165 6149.015448003414 4892.973130984404 6195.333018121006 5236.367402401595 5784.181974549017 5324.129196422365 5468.638195817215 6852.313632589505 0.702258728076951 0.8026769535888368 0.8558276956827859 0.8973633983650114 0.7140614678980095 0.9041228043993916 0.7641750922633646 0.8441210202404529 0.776982707140094 0.7980717884552818 1.0 12.742375470209275 -10.797474752906677 0.8473976083883412 1.010830283393929 0.80850166427396 0.0 0.0864031102690053 0.396316813362504 0.459802996543814 0.05374880939802106 0.010886141418069657 1.594135550826303e-11 10.797474752906677 -0.20232861911996913 T(ph)PSAAAVR ddPTM_A549_MK2206_60min_R1 2 TPSAAAVR 8 0 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 T(0.998)PS(0.002)AAAVR;T(0.986)PS(0.014)AAAVR 72.638 0.0058935 28786000.0 5777.4 6253.799999999999 5978.0 6068.0 8185.1 7109.3 6270.3 6457.1 9415.3 9195.5 9282.5 True False 6752.483876131383 6572.091707860491 6825.770290512314 7554.660272402869 6981.082632736407 7861.601407228592 7409.532345922154 7372.413699039403 7282.749583144562 7118.230163447885 6977.3990660329655 0.9677651818717803 0.9419113978809708 0.9782685820195088 1.082733007085706 1.000527928339569 1.1267237738343012 1.0619332900124459 1.0566134499787219 1.0437627996079641 1.0201838960452336 1.0 12.768473634302849 -6.0632867753800275 6.4948894550990595 1.0360045447517248 0.9559068940576376 0.5093711238748435 0.03658226800636452 0.16090674575424296 13.405193271944263 0.0055488506156912585 0.015043385791970437 8.643969476150977e-07 6.0632867753800275 -0.08009765069408714 T(ph)PSASNDDQQE ddPTM_A549_MK2206_60min_R1 2 TPSASNDDQQE 11 0 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 T(0.499)PS(0.499)AS(0.001)NDDQQE;T(0.498)PS(0.498)AS(0.005)NDDQQE 168.3 5.8391000000000006e-15 223700000.0 1003.4599999999999 803.73 822.79 710.5799999999999 1212.33 485.92 236.7 741.55 873.6800000000001 911.99 1488.04 True False 1172.8195157584369 844.6364239916068 939.4739942005065 884.6721318991486 1033.99786296384 537.3397318724094 279.7053261055729 846.6669834016301 675.7928749802704 705.9708255954366 1118.5186001852617 1.0485471726301032 0.7551384696255463 0.8399270195818829 0.7909319807043166 0.9244351080014025 0.4804030364657406 0.25006765739903203 0.7569538702900386 0.6041856388157855 0.6311659238196895 1.0 10.127373532272276 -2.3242469974520037 1.059824865392256 0.749577712186733 198.63108858472177 0.1569864061242322 0.20480550140211787 1977.2035699184582 4.155438676748698 0.03514014019562351 948602.6437654016 0.004739723450426222 2.3242469974520037 197.88151087253505 T(ph)PSASNDDQQE ddPTM_A549_PD325901_60min_R1 2 TPSASNDDQQE 11 0 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 T(0.496)PS(0.496)AS(0.008)NDDQQE;T(0.497)PS(0.497)AS(0.006)NDDQQE 142.08 3.1744e-11 181260000.0 797.95 487.74 807.25 793.12 749.4 778.31 514.01 969.5999999999999 1080.92 1310.8600000000001 1429.79 True False 878.9572965802568 528.8435615236789 862.0348393885944 842.1092210937901 696.7647292896504 771.9717014078578 533.5709318270642 950.2605673635145 1035.492691400554 1228.0920758872335 1253.934894185574 0.7009592767981278 0.42174722465727443 0.6874637936832301 0.6715733209105221 0.5556626045901661 0.6156393804713844 0.42551725316936534 0.7578228915789964 0.8257946215565701 0.9793906219388485 1.0 10.292246728277329 -8.910866253909255 1.1308667033349238 0.9474703880655486 0.5843686827087086 0.7103152002633712 0.09852422777734922 0.16399416530022248 0.4233465469291723 0.021738617744084 0.021534606188967256 1.2278172937093555e-09 8.910866253909255 -0.36310170535684005 T(ph)PSDDEEDNLFAPPK ddPTM_A549_MK2206_60min_R1 1 TPSDDEEDNLFAPPK 15 0 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 T(0.5)PS(0.5)DDEEDNLFAPPK 54.276 0.017187 1469700.0 1455.7 1509.2 1192.3 1352.4 2010.9 1660.7 1008.2 1345.1 2087.5 1798.6 1840.5 True False 1701.3865715519878 1586.0118336856074 1361.386068480735 1683.738060711544 1715.0992738231214 1836.4341717165576 1191.3768896478189 1535.7720441959857 1614.684583052507 1392.29501081805 1383.453054784128 1.229811568718152 1.1464153613315677 0.984049342168075 1.2170547131245246 1.239723507705683 1.3274278916555735 0.8611617759835873 1.1101005841037557 1.1671408563295702 1.0063912223138658 1.0 10.434057973944807 -7.739747681650484 24.999269973688804 1.0689186334705143 1.1827585659155662 0.3239178044173666 0.10935209104571919 321.08912557734584 370048.35055516183 0.017874343290047855 0.026498695081957284 1.820758383722486e-08 7.739747681650484 0.11383993244505186 T(ph)PSEADRWLEEVSK ddPTM_A549_MK2206_60min_R1 2 TPSEADRWLEEVSK 14 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 T(0.972)PS(0.028)EADRWLEEVSK;T(0.568)PS(0.432)EADRWLEEVSK 156.22 2.3214999999999995e-19 20162500.0 3854.38 3969.2000000000003 2939.29 2758.83 6305.4 4628.9 4266.5 4171.3 6538.9 6685.4 6629.1 True False 4504.90511345645 4171.215326176061 3356.1255197724913 3434.743473848583 5377.884012712873 5118.7271255848555 5041.667823529476 4762.594549070491 5057.84959047762 5175.163496788049 4982.911516147494 0.9040708627592465 0.8371040329853198 0.6735270150587097 0.689304528631111 1.0792654044298082 1.0272562755724723 1.0117915614579103 0.9557854948130126 1.0150390136544234 1.0385822585886884 1.0 12.282773240311343 -6.763478953991094 24.999999701096097 1.0093813848805968 0.7730464445507654 0.7590060709407653 0.06553417095149114 20.048416227241294 245747.598641 0.009474296766843584 0.018557788864146156 1.7239356313137008e-07 6.763478953991094 -0.23633494032983138 T(ph)PSEADRWLEEVSK ddPTM_A549_PD325901_60min_R1 3 TPSEADRWLEEVSK 14 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 T(0.985)PS(0.015)EADRWLEEVSK;T(0.998)PS(0.002)EADRWLEEVSK;T(0.579)PS(0.421)EADRWLEEVSK 167.28 3.4354e-21 41256600.0 5295.46 4909.34 3766.69 4774.860000000001 3997.4500000000003 4829.05 4120.33 3826.02 5964.73 4304.9400000000005 6624.98 True False 5833.051200888387 5323.067311130232 4022.320234347012 5069.792257706139 3716.6829024538465 4789.7238178664265 4277.13141288109 3749.7070296453758 5714.053141007318 4033.1253537143457 5810.149459208376 1.00394167858173 0.9161670191966957 0.6922920421560114 0.8725751881771541 0.6396880026146933 0.8243718774351493 0.7361482596807144 0.645371871407292 0.9834606116631376 0.6941517394741602 1.0 12.504359560389203 -8.850907193423923 9.853467511510129 0.9925767557449029 0.7891844158213623 0.0 0.1397473146188604 0.223246288844057 22.763684113954596 0.018271385794881776 0.01943415161749226 1.4095899886263403e-09 8.850907193423923 -0.20339233992354055 T(ph)PSEAER ddPTM_A549_MK2206_60min_R1 1 TPSEAER 7 0 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 T(0.521)PS(0.479)EAER 48.794 0.059538 79508000.0 1503.4 1937.4 1541.9 1659.7 1172.6 963.35 953.13 998.58 1104.8 2958.2 2706.5 True False 1757.1371653989552 2036.0053846955304 1760.5646053765379 2066.326574506763 1000.1120933338275 1065.2910575800242 1126.3013834854444 1140.1317730229932 854.5645640030702 2289.9405654408733 2034.4013544000225 0.8637121488336618 1.000788453218456 0.8653968901312281 1.0156926852401529 0.4916001904790201 0.523638590426615 0.55362791665935 0.5604261767507702 0.42005701684911384 1.1256090448859406 1.0 10.990388612275387 -6.748879156609146 24.975244803851858 0.6651268717151155 0.9359254492233929 0.2771984676788014 0.2085724162070282 264.5310123536095 526000.6125758706 0.033241119612563784 0.06882433436143529 1.782874787250295e-07 6.748879156609146 0.2707985775082774 T(ph)PSFHIK ddPTM_A549_MK2206_60min_R1 1 TPSFHIK 7 0 O60890 O60890 OPHN1 Oligophrenin-1 1 T(0.5)PS(0.5)FHIK 49.813 0.047816000000000004 6489500.0 651.03 1201.9 797.6 635.52 1026.6 730.29 701.07 658.13 1005.3 854.56 961.42 True False 760.9079478446731 1263.0715762700318 910.7116734213157 791.2224285295764 875.5884999287971 807.5688030727312 828.4453442029314 751.4219429385946 777.6011551342203 661.5143024823038 722.6728801578677 1.0529078490927362 1.7477777441905862 1.2601990449985767 1.0948555705545975 1.2115972855346737 1.1174748980428295 1.146362852335012 1.0397815713998382 1.0760071070666906 0.9153716994856598 1.0 9.497198944877741 -6.636393854620124 0.6666106378808896 1.0374266792106883 1.416481557633259 0.3524678462101587 0.1684404969599312 0.7122487798343873 0.5077636112412237 0.02771213061844476 0.14598606821291876 2.3099689666036092e-07 6.636393854620124 0.3790548784225707 T(ph)PSFLK ddPTM_A549_MK2206_60min_R1 2 TPSFLK 6 0 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 T(0.992)PS(0.008)FLK;T(0.945)PS(0.055)FLK 89.14200000000001 0.040397 143894100.0 3450.6 3198.1000000000004 3655.6000000000004 2809.3999999999996 4339.9 3461.1 3233.0 3669.8 4192.0 3558.5 3745.6000000000004 True False 4032.976920929646 3360.8696298104574 4174.019048845237 3497.703126118757 3701.506459030768 3827.351304707762 3820.394251370161 4190.005388291153 3242.5186932484344 2754.632378514415 2815.4641466989565 1.4324376766289797 1.1937177867283346 1.482533192169804 1.2423184753461358 1.314705592458234 1.3594033187015404 1.3569323039859889 1.4882112397715324 1.1516817562923634 0.9783936981559986 1.0 11.459157063785396 -9.007027530016735 3.0692776968852153 1.0597296790262147 1.3517374381688319 0.6929668563635121 0.09379059332066882 0.09979075352955684 1.9117261447754956 0.016907672192646585 0.017060537940034485 9.839487310712841e-10 9.007027530016735 0.2920077591426171 T(ph)PSFLK ddPTM_A549_PD325901_60min_R1 2 TPSFLK 6 0 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 T(0.992)PS(0.008)FLK;T(0.919)PS(0.081)FLK 75.109 0.048734 477610000.0 6187.0 5554.0 5597.2 5246.3 6044.0 5262.5 6311.4 6009.0 5467.5 6549.4 5711.3 True False 6815.0996853713295 6022.055071764697 5977.0596506978545 5570.352035788219 5619.490290668059 5219.643944776313 6551.583780730596 5889.145781030692 5237.719988743415 6135.8697662724035 5008.846306913651 1.3606126576422457 1.2022838599484529 1.1933006693473087 1.1121028066082859 1.1219131006099237 1.042085068086777 1.3080025577322114 1.1757489489948962 1.045693891927539 1.2250065963898984 1.0 12.290262628808248 -2.0000000001324194 0.10547882194732912 0.9074539663830045 2.0071740864992864 0.026494138945599932 0.10550238276155521 59.74638249033278 0.42864639730785614 0.4581002875981947 9.581380106454992 0.00999999999695093 2.0000000001324194 1.0997201201162818 T(ph)PSFLKK ddPTM_A549_MK2206_60min_R1 3 TPSFLKK 7 1 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 T(0.985)PS(0.015)FLKK;T(0.952)PS(0.048)FLKK;T(0.796)PS(0.204)FLKK 90.65700000000001 0.033311 731466000.0 22311.5 22380.899999999998 23343.8 20510.7 27874.8 21990.4 22261.3 21257.5 30696.0 28635.800000000003 31649.600000000002 True False 26077.135736197128 23519.992213446985 26654.30185808988 25535.82242076031 23774.453845524276 24317.409531953872 26305.890055065447 24270.81572336343 23743.4050114394 22166.95289157317 23790.13083547717 1.096132506228568 0.9886449291137424 1.1203932438379656 1.0733788139861704 0.9993410296874233 1.022163757741525 1.1057480195038119 1.020205222544192 0.998035915634054 0.9317709534626255 1.0 14.538075585535912 -8.509984876831616 17.89329018928125 0.999601186885696 1.0552601486331254 0.36042225041281206 0.04477584268920863 13.089188099462342 18164.2204164726 0.00627068507643451 0.007389838576212151 3.0904030458355432e-09 8.509984876831616 0.05565896174742946 T(ph)PSFLKK ddPTM_A549_PD325901_60min_R1 4 TPSFLKK 7 1 P35611;P35611-3;P35612;Q9UEY8-2;Q9UEY8 P35611;P35612;Q9UEY8-2 ADD1;ADD2;ADD3 Alpha-adducin;Beta-adducin;Gamma-adducin 1 T(0.841)PS(0.159)FLKK;T(0.963)PS(0.037)FLKK;T(0.95)PS(0.05)FLKK;T(0.904)PS(0.096)FLKK 90.65700000000001 0.027245 1960892000.0 53655.7 53936.5 57587.4 54301.8 67805.0 57021.5 59858.6 61127.5 61823.0 58100.5 63859.0 True False 59102.78716476133 58481.91814516319 61495.62726516785 57655.89885766439 63042.610714551265 56557.13580941809 62136.551778882764 59908.26405890393 59224.79430527369 54432.024514506666 56004.74783555389 1.0553174409124058 1.0442314340363246 1.0980431060190963 1.0294823400858577 1.1256654685717462 1.0098632347294227 1.1094872163576848 1.069699737508182 1.0574959551496381 0.9719180358482249 1.0 15.773261517227862 -10.270414136578447 0.6875162107375911 0.99943806156774 1.0679196554072712 0.4404695606267721 0.03395479435140826 0.5483501517216528 0.47843019864085495 0.019706933594606568 0.006152398550979805 5.365199351496832e-11 10.270414136578447 0.06848159383953123 T(ph)PSGEFLER ddPTM_A549_PD325901_60min_R1 1 TPSGEFLER 9 0 B3KT28;Q9UNN5;B1ANM7;Q9UNN5-2 B3KT28 FAF1 FAS-associated factor 1 1 T(0.927)PS(0.073)GEFLER 89.171 0.0011633 10020000.0 2364.5 1893.4 2167.0 1999.8 2265.1 2180.3 1857.7 1895.9 2295.8 2378.4 2366.7 True False 2604.5422993470993 2052.963462887879 2314.065651229588 2123.3231041246745 2106.0071901707865 2162.5443596761606 1928.395790072447 1858.0847871952235 2199.315509859558 2228.227418099717 2075.6109037474034 1.2548316713140881 0.9890887830572503 1.1148841273919248 1.0229870638524443 1.0146445012254004 1.0418833104855074 0.9290738387386732 0.895198991217743 1.0595991309781678 1.0735284797727611 1.0 11.019320304539894 -2.985817492294633 1.452106467744463 1.015441080392561 199.99999762173536 0.5509488707668573 0.06111370444993307 650.1307091090528 2.0862399530550295 0.008581110307503166 430195.5523308605 0.0010331955041268767 2.985817492294633 198.9845565413428 T(ph)PSIQPSLLPHAAPFAK ddPTM_A549_PD325901_60min_R1 2 TPSIQPSLLPHAAPFAK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;H0YF36;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 T(0.498)PS(0.498)IQPS(0.004)LLPHAAPFAK;T(0.497)PS(0.497)IQPS(0.005)LLPHAAPFAK 86.727 9.5275e-06 2310800.0 2154.4 2239.0 1911.7 2377.0 2792.9 2399.9 2317.3 2411.9 2905.6 2768.8 2579.2 True False 2373.113102014544 2427.6883877711844 2041.4394579859725 2523.8218914413196 2596.7363389819375 2380.3560100843097 2405.4861195752146 2363.7927624010545 2783.487736496179 2593.9774954736367 2261.9747508958903 1.049133329660128 1.0732606041732609 0.9025032030872265 1.115760417061119 1.1479952806517666 1.052335358359563 1.0634451682639183 1.0450128859594199 1.2305565017442106 1.1467756191558953 1.0 11.14336711011688 T(ph)PSITPQEER ddPTM_A549_MK2206_60min_R1 1 TPSITPQEER 10 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 T(0.975)PS(0.023)IT(0.002)PQEER 45.653 0.046326 2371800.0 630.33 670.81 511.01 346.48 1024.4 557.03 476.93 757.0 906.0 911.04 1095.1 True False 736.7142939110837 704.9513637388295 583.478901999782 431.3676155540785 873.7121170144745 615.9745448734113 563.5820075180854 864.3070682152716 700.7924465847044 705.2354312552407 823.1564467775598 0.8949869697250452 0.8564002219730259 0.7088311150133706 0.5240408639727828 1.0614168429766015 0.748307988456859 0.6846596533676681 1.0499912520867758 0.8513478201235279 0.8567453173889984 1.0 9.685022841005301 -9.694384326214374 0.3417521074709194 1.0220176249789295 0.7763693284159722 0.0869111900950631 0.15025931810946197 1.983370081060716 0.5064202456382466 0.1859396371503657 0.07288436067669951 2.021229712279802e-10 9.694384326214374 -0.24564829656295728 T(ph)PSITPQEER ddPTM_A549_PD325901_60min_R1 2 TPSITPQEER 10 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 T(0.998)PS(0.002)ITPQEER;T(0.981)PS(0.016)IT(0.003)PQEER 66.62100000000001 0.005280600000000001 7021600.0 1271.06 1102.67 1054.24 1089.2 1410.8000000000002 907.49 1177.37 1398.06 1032.08 1352.4299999999998 1282.97 True False 1400.0970754950838 1195.5958707207017 1125.7870660601207 1156.4774102473214 1311.7102749957805 900.0997023173509 1222.1754596315843 1370.1745965431467 988.7052667548791 1267.0373389928525 1125.172823416912 1.2443395773133632 1.0625886493507102 1.0005459095975526 1.0278220253625963 1.1657855999511202 0.799965732894204 1.086211321670653 1.2177459035868072 0.8787141372223959 1.1260824227385158 1.0 10.135930897070832 -2.0000000000000004 0.3689308857235022 0.9640938422532002 4.0691805962556735 0.038058837892051445 0.12669012779361913 58.94074251063723 0.7123336879620131 0.029372362345178874 131.44365450633438 0.00999999999999999 2.0000000000000004 3.1050867540024734 T(ph)PSLKDSPAGR ddPTM_A549_MK2206_60min_R1 2 TPSLKDSPAGR 11 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 T(0.893)PS(0.107)LKDSPAGR;T(0.561)PS(0.439)LKDSPAGR 82.925 0.00025865 78159000.0 7680.1 8230.0 8049.9 6548.7 9327.5 7200.7 6190.9 6094.5 9596.8 9666.6 10774.0 True False 8976.313119582617 8648.871846827817 9191.496865439121 8153.131793982309 7955.437106064533 7962.673294562188 7315.706393692397 6958.414038623477 7423.140122940505 7482.908346254732 8098.518452727083 1.108389537170215 1.0679572933386856 1.1349602916992787 1.006743621265299 0.9823324046863943 0.9832259247221755 0.9033388559149256 0.859220619085002 0.9166047056966139 0.9239848485786865 1.0 12.983442289399841 -6.570538784815799 1.7835550544812186 0.948712367757686 1.1018702222989134 0.7444506617628193 0.04200517382706663 0.1752208700541109 1.1072181859061763 0.00747940892516266 0.020354876980558625 2.688197761932867e-07 6.570538784815799 0.15315785454122743 T(ph)PSLKDSPAGR ddPTM_A549_PD325901_60min_R1 2 TPSLKDSPAGR 11 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 T(0.548)PS(0.116)LKDS(0.336)PAGR;T(0.812)PS(0.187)LKDS(0.001)PAGR 76.01 0.00050237 100909000.0 7076.4 7783.700000000001 8477.0 9291.9 8992.9 9091.6 9190.4 8985.3 9607.400000000001 8588.8 11036.9 True False 7794.790918629655 8439.659715897526 9052.300196342048 9865.839559563987 8361.269727820787 9017.561023910379 9540.145701179852 8806.081142668514 9203.634388633467 8046.501702226223 9679.431268673556 0.8052943093729754 0.8719169010695476 0.9352099255706118 1.0192581863248227 0.8638182859855768 0.9316209572244963 0.9856101496433487 0.90977257839192 0.9508445417056729 0.8312990173573385 1.0 13.240706566669303 -3.662633471883414 0.531645719145966 0.9688117872013312 1.0313069429389597e-47 0.1911456762155198 0.05968871021469168 10.155763739267975 0.5160425274294059 0.008067949012839326 8.965549035583477 0.0002174535630476531 3.662633471883414 -0.9688117872013312 T(ph)PSLRSPDQPPPCPQFMAQGK ddPTM_A549_MK2206_60min_R1 1 TPSLRSPDQPPPCPQFMAQGK 21 1 P49023-3 P49023-3 PXN Paxillin 1 T(0.333)PS(0.333)LRS(0.333)PDQPPPCPQFMAQGK 49.25 0.0038309 1923500.0 904.66 1112.7 1175.2 673.55 1477.6 1030.2 829.84 824.82 1063.0 1172.2 1640.3 True False 1057.3444911865226 1169.3316772740354 1341.8610313499616 838.5697802368088 1260.2469973648838 1139.2150802085848 980.6111863770534 941.7407609053104 822.232197262187 907.399205871743 1232.9682400230397 0.8575602005504738 0.9483875085478154 1.0883175963436715 0.6801227744691453 1.0221244606765656 0.9239614154110709 0.7953255846709639 0.7637996911321192 0.6668721631035869 0.7359469420354144 1.0 10.267919922560672 -7.748410605598239 23.306688764792444 0.8282926056079919 0.9227443284049744 0.18228049948283254 0.12445446085931841 212.38344090512743 379921.53756190365 0.022959685203239977 0.033912164065495444 1.7847993306442772e-08 7.748410605598239 0.09445172279698255 T(ph)PSNELYKPLR ddPTM_A549_MK2206_60min_R1 2 TPSNELYKPLR 11 1 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 1 T(0.976)PS(0.023)NELY(0.001)KPLR;T(0.991)PS(0.009)NELYKPLR 48.111999999999995 0.012234 7258900.0 2325.8999999999996 2222.94 2329.8999999999996 2633.7 3466.0 2485.4 2457.2 2860.8 3832.7 3392.1 3419.8 True False 2718.4550572046223 2336.078151055582 2660.3148544437327 3278.9566182312847 2956.1559913824376 2748.4033783250034 2903.6414334880155 3266.3271608325576 2964.5995695642346 2625.8222540842357 2570.5692783215213 1.0575303611267246 0.9087785226239642 1.034912724149886 1.2755760546443284 1.1500005140155916 1.0691808236810487 1.1295713591442191 1.2706629571817407 1.1532852254034558 1.0214944511430528 1.0 11.327872178735959 -6.00554870386178 24.848466825846423 1.109896786452556 0.9803272087768893 0.28619480829082644 0.09035432443162847 267.02469021589894 1195826.5529668035 0.013955022824669098 0.04163060979365483 9.873049084404591e-07 6.00554870386178 -0.12956957767566668 T(ph)PSPAAEDAREPEAK ddPTM_A549_MK2206_60min_R1 2 TPSPAAEDAREPEAK 15 1 Q92797 Q92797 SYMPK Symplekin 1 T(0.802)PS(0.198)PAAEDAREPEAK;T(0.682)PS(0.318)PAAEDAREPEAK 170.74 1.2562e-26 17114000.0 2859.4 3469.0 3316.1 3459.2 4963.9 3818.9 3002.3 3644.8 4845.0 4753.6 4628.0 True False 3341.996814381914 3645.5572827030005 3786.372843821995 4306.70415528939 4233.716885638568 4223.013463219344 3547.77904759933 4161.461561731862 3747.61523587516 3679.758458481417 3478.739873697876 0.9606917837260982 1.0479534012492284 1.0884323005724217 1.2380069541421024 1.2170260034815872 1.2139491932549444 1.0198460294267608 1.1962554582467984 1.0772910225941876 1.057784885355587 1.0 11.764349088668235 -9.61115586435558 0.9120163224957152 1.0123986348237763 1.1258886037987264 0.12956027199216136 0.087128962210893 0.5658043265925617 0.9897808937751142 0.028587612740132492 0.018608365974237696 2.448184452935754e-10 9.61115586435558 0.11348996897495 T(ph)PSPAAEDAREPEAK ddPTM_A549_PD325901_60min_R1 2 TPSPAAEDAREPEAK 15 1 Q92797 Q92797 SYMPK Symplekin 1 T(0.659)PS(0.341)PAAEDAREPEAK;T(0.93)PS(0.07)PAAEDAREPEAK 159.01 5.5928e-20 968120000.0 20773.8 20810.1 21915.0 19753.4 24628.0 20336.9 21144.0 20439.6 20427.2 21838.7 24254.5 True False 22882.74088313673 22563.84016005229 23402.28368560057 20973.522654773635 22898.214241987596 20171.283029077716 21948.646490440766 20031.916143444 19568.715821501508 20459.80075498414 21271.35026194336 1.0757540354208879 1.0607620053354736 1.1001785687046708 0.9859986506027043 1.0764814626251002 0.9482840901344294 1.0318407726898822 0.9417322312294939 0.9199564475468188 0.9618477672096272 1.0 14.376623995094402 -7.067403715907976 0.8996686804670982 0.9616293277092849 1.0745004036553605 0.5621530180754069 0.03965012328727494 0.34520268082069383 0.540909698767074 0.007347186952024693 0.020423092080764316 8.562415214061772e-08 7.067403715907976 0.1128710759460756 T(ph)PSPAPK ddPTM_A549_MK2206_60min_R1 2 TPSPAPK 7 0 Q96P11-2;Q63ZY6;Q3KNT7-3;Q63ZY6-6 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 1 T(0.949)PS(0.051)PAPK;T(0.882)PS(0.118)PAPK 99.44200000000001 0.012067 449920000.0 11449.3 12264.8 12002.3 11020.5 15359.3 10866.8 11472.3 11466.1 16167.4 15818.599999999999 15750.400000000001 True False 13381.661931490129 12889.025932803626 13704.406617232522 13720.52299472905 13099.967316341676 12016.717563201952 13556.668410143482 13091.454788458539 12505.509714032627 12245.16727350516 11839.14099107412 1.1302899375536588 1.0886791484720932 1.1575507570663006 1.158912036360861 1.1064964363730552 1.0149991095014166 1.145071962599673 1.1057774207037974 1.0562852257153539 1.0342952485097656 1.0 13.531276787131542 -9.249332901171153 0.3528029086496187 0.9881985105114206 1.132633023077919 0.4893935549620174 0.03881062065585344 0.6605925084843245 0.21534513848696737 0.03572485003416922 0.021206046445615533 5.632057743551133e-10 9.249332901171153 0.1444345125664983 T(ph)PSPAPK ddPTM_A549_PD325901_60min_R1 2 TPSPAPK 7 0 Q96P11-2;Q63ZY6;Q3KNT7-3;Q63ZY6-6 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 1 T(0.969)PS(0.031)PAPK;T(0.984)PS(0.016)PAPK 90.65700000000001 0.013249 821610000.0 28958.0 28801.0 29493.0 30129.0 36347.0 31119.0 32663.0 33313.0 31822.0 32251.0 32896.0 True False 31897.794842247135 31228.161347118297 31494.572335816458 31989.99990207637 33794.11211034281 30865.577181471574 33906.00833887941 32648.546081457047 30484.632003985906 30214.666356009893 28850.000544925253 1.1056427812739849 1.0824319153301147 1.0916662648506046 1.1088387971522395 1.1713730146284946 1.0698640068795722 1.1752515666708891 1.1316653540653039 1.0566596682213298 1.0473021069431032 1.0 14.816283725670154 -9.177411100191401 1.4720784370320033 1.0171091278312112 1.1164820391832415 0.5194118649913853 0.034656909375975084 0.16982974065414988 0.7599289980381909 0.007517092288879704 0.006839818212597773 6.6464371113547e-10 9.177411100191401 0.0993729113520303 T(ph)PSPARPALR ddPTM_A549_MK2206_60min_R1 2 TPSPARPALR 10 1 Q9H211 Q9H211 CDT1 DNA replication factor Cdt1 1 T(0.896)PS(0.104)PARPALR;T(0.695)PS(0.305)PARPALR 82.54299999999999 0.00041169 99365000.0 4315.5 5620.6 5127.200000000001 4591.2 7699.6 5947.9 5010.8 5903.0 8241.6 7205.5 8540.4 True False 5043.8508961548405 5906.6645324763585 5854.314057128595 5716.0442061068 6566.999039598449 6577.302830103518 5921.197499154222 6739.768327179323 6374.890759130793 5577.77254556291 6419.5829769510265 0.7856975934829978 0.920100971306663 0.9119461619466588 0.8904074028842335 1.0229634951642042 1.0245685512156741 0.9223648203339352 1.0498763473231665 0.9930381431347337 0.8688683619464743 1.0 12.648263866024344 -3.6920289677887013 0.46842884355992037 1.0001960971987058 7.646327595550215e-13 0.4551973341100398 0.05678992412327385 6.401065842136858 0.3026548363429469 0.007500021816719685 4.936153059209429 0.00020322214556217503 3.6920289677887013 -1.0001960971979411 T(ph)PSPARPALR ddPTM_A549_PD325901_60min_R1 1 TPSPARPALR 10 1 Q9H211 Q9H211 CDT1 DNA replication factor Cdt1 1 T(0.575)PS(0.425)PARPALR 90.61399999999999 0.00026066 50995000.0 2772.9 2858.4 3178.8 2531.5 3114.1 2939.8 3029.7 2907.9 3386.0 3194.9 3130.2 True False 3054.40276669891 3099.287399555672 3394.532483677256 2687.865005546359 2895.3763590617823 2915.8592434875827 3144.9968914154524 2849.8996532965807 3243.6981951321814 2993.1734687549542 2745.2052439726713 1.1126318417921968 1.1289820338061856 1.2365314000219974 0.9791125860071092 1.0547030555980557 1.0621643863931838 1.145632698436868 1.0381371883045083 1.1815867692421151 1.0903277543006002 1.0 11.422698300337812 -11.085587214020334 1.4177091522367873 1.000121595348294 1.1120124617715579 0.034307491875171015 0.07254602740162237 0.474434988767185 1.7062708704564002 0.04991748989168395 0.011003921119667389 8.211316385066448e-12 11.085587214020334 0.11189086642326385 T(ph)PSPEPVDKDFYSEFGNK ddPTM_A549_MK2206_60min_R1 2 TPSPEPVDKDFYSEFGNK 18 1 Q9Y2I1-2;Q9Y2I1 Q9Y2I1-2 NISCH Nischarin 1 T(0.888)PS(0.112)PEPVDKDFYSEFGNK;T(0.886)PS(0.114)PEPVDKDFYSEFGNK 96.131 9.6726e-07 7854400.0 4167.8 5011.5 5185.299999999999 4925.5 7562.0 6070.4 5725.5 5199.299999999999 8265.2 6985.3 7657.1 True False 4871.222747073144 5266.5639441528065 5920.653510771751 6132.247721114098 6449.639817320829 6712.765698794598 6765.749237927579 5936.316697188455 6393.145396812253 5407.315878498454 5755.630744790843 0.8463403861482712 0.9150281138030496 1.0286715345890218 1.0654345271652657 1.1205791516695371 1.1662954064365603 1.1755009203901672 1.031392902083085 1.1107636469901054 0.9394827636210623 1.0 12.490758322927364 -5.698904952362426 1.924608462188643 1.0744055357686069 0.8428261636118238 0.5702329401956686 0.06595394045980253 0.21638705864883656 1.3994007343243193 0.009249255804627932 0.06542771558906096 2.0002995978468062e-06 5.698904952362426 -0.23157937215678304 T(ph)PSPEPVDKDFYSEFGNK ddPTM_A549_PD325901_60min_R1 2 TPSPEPVDKDFYSEFGNK 18 1 Q9Y2I1-2;Q9Y2I1 Q9Y2I1-2 NISCH Nischarin 1 T(0.543)PS(0.457)PEPVDKDFYSEFGNK;T(0.587)PS(0.413)PEPVDKDFYSEFGNK 97.488 6.479899999999999e-07 11177200.0 6544.0 7455.200000000001 7823.0 7940.6 8374.2 9148.2 8141.4 9917.5 7832.1 9002.4 8984.7 True False 7208.342062561821 8083.475868026671 8353.91582352057 8431.07282758895 7786.025081421659 9073.700092276049 8451.225432145022 9719.687682371758 7502.944073861413 8433.986927640806 7879.638858705918 0.914806146806791 1.025868826347992 1.0601901906063425 1.0699821373505936 0.9881195345417603 1.151537558380719 1.072539691690004 1.2335194361900024 0.9521939023349644 1.0703519639510395 1.0 12.94391379395116 T(ph)PSPKEEDEEPES(ph)PPEKK ddPTM_A549_MK2206_60min_R1 1 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 T(0.676)PS(0.324)PKEEDEEPES(1)PPEKK 139.0 1.2492e-13 31842000.0 9380.3 9761.5 10080.0 9048.5 13231.0 9072.7 9334.8 10807.0 14079.0 14059.0 14812.0 True False 10963.465313683528 10258.318655262421 11509.49557182405 11265.3829062026 11284.737426999722 10032.767092029158 11030.812328391637 12338.925345049454 10890.128979543108 10883.062135600447 11133.771609596577 0.9847036294721317 0.9213695964825097 1.033746332815344 1.011820908603207 1.0135592701823541 0.901111271528291 0.9907525244081533 1.1082430803964143 0.9781167928895304 0.9774820714141437 1.0 13.442654773732375 -7.995662544541027 24.998542797923758 1.0007101707715813 0.9779705460967404 0.08648223063900529 0.04981194546666638 364.95771983685063 2103386.169162622 0.007851870399355226 0.010828705117565975 1.010037400414925e-08 7.995662544541027 -0.02273962467484092 T(ph)PSPKEEDEEPES(ph)PPEKK ddPTM_A549_PD325901_60min_R1 1 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 T(0.991)PS(0.009)PKEEDEEPES(1)PPEKK 118.51 1.9804e-10 24870000.0 3949.2 4144.8 3584.2 4674.2 4579.1 4268.5 3762.4 4665.8 3832.7 4558.3 4497.0 True False 4350.119876752621 4494.096842176867 3827.4453655454963 4962.914718121587 4257.479813037412 4233.738751216662 3905.58019086428 4572.73695875071 3671.6249475732734 4270.4881600756535 3943.8975088317356 1.1030002344156293 1.139506498866425 0.970472827190498 1.2583782177422012 1.0795107640356927 1.0734910686030439 0.9902844032123934 1.159446194661699 0.930963580912346 1.0828091121821928 1.0 11.94540634514529 -8.769381196091098 24.997191151944048 0.9673994644330894 1.0944638152256692 0.1591314886095443 0.08300750362778293 131.94897217637077 415313.72815890686 0.012603919040748578 0.013536695854765655 1.7006651173485502e-09 8.769381196091098 0.12706435079257972 T(ph)PSPPPPIPEDIALGK ddPTM_A549_MK2206_60min_R1 1 TPSPPPPIPEDIALGK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.5)PS(0.5)PPPPIPEDIALGK 47.288000000000004 0.028149 4356900.0 805.53 850.52 879.68 920.66 1168.4 821.21 822.42 1116.6 1505.7 1148.3 1423.3 True False 941.483770682333 893.807835135358 1004.4318516490257 1146.221741329998 996.5299077701205 908.1098971249202 971.8430684230888 1274.8814694440841 1164.6613541088182 888.8982324710141 1069.8553289183644 0.8800103576940478 0.835447383375664 0.9388482951844689 1.0713801299553658 0.9314623022699932 0.8488156039219147 0.908387369912559 1.1916391263228117 1.0886157432952208 0.8308583492028778 1.0 10.063200006182699 -8.201700197559935 24.994241899040585 1.0542501544865348 0.9180386894572286 0.2071606649140708 0.10008315511067384 194.73503809383442 81475.0753497055 0.013046634451459855 0.016843129976654155 6.284920701375475e-09 8.201700197559935 -0.13621146502930626 T(ph)PSPSPPCSSSPSPSGR ddPTM_A549_MK2206_60min_R1 1 TPSPSPPCSSSPSPSGR 17 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.911)PS(0.089)PSPPCSSSPSPSGR 106.52 1.1077999999999998e-08 2154400.0 713.79 719.0 858.55 665.24 697.39 504.36 432.53 398.22 559.86 1171.0 1009.4 True False 834.2603015099904 755.5940289026973 980.3052999195962 828.2238298637587 594.8048548269468 557.7310404329279 511.11510224099464 454.6689044976029 433.05260391270735 906.4702867051799 758.7381219772337 1.0995365559541803 0.9958561551298581 1.292020621508999 1.0915806203403207 0.7839395933829119 0.7350771290883719 0.6736383574731347 0.5992435220109389 0.5707537177441326 1.1947077133055652 1.0 9.56745821597181 -6.75351938043139 4.881758204348327 0.7617727683072223 1.1272137064299235 0.4228766378159391 0.1811288585063491 0.125791284001778 7.901316528241502 0.02577536065681281 0.05257647504803206 1.763927047312547e-07 6.75351938043139 0.3654409381227012 T(ph)PSPSQPK ddPTM_A549_PD325901_60min_R1 1 TPSPSQPK 8 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 T(0.723)PS(0.232)PS(0.044)QPK 62.463 0.010969 306300000.0 3732.2 4057.7 4064.0 4237.1 4947.4 4125.2 4071.3 4493.5 5738.9 5436.9 6785.1 True False 4111.090196499576 4399.656619499389 4339.807478817279 4498.816043847714 4599.911691603436 4091.6057389057014 4226.235549400845 4403.8736174174455 5497.713990562336 5093.613206132843 5950.575714292687 0.6908726808777762 0.7393665471614544 0.7293088412258155 0.7560303842604689 0.7730196055744504 0.6875982989474572 0.7102229687204636 0.7400752177372993 0.9238961496376523 0.8559866222521115 1.0 12.538813539633036 -8.829555655585018 2.6753908757229694 0.9695081926118456 0.7270864882748912 0.7974323730094224 0.04346839883317195 0.04956588343203337 0.6888643701642954 0.006067544317705904 0.006442311182274498 1.4806224987884697e-09 8.829555655585018 -0.24242170433695442 T(ph)PSQIIR ddPTM_A549_PD325901_60min_R1 1 TPSQIIR 7 0 Q01804-5;Q01804-3;Q01804;D6RI06 Q01804-5 OTUD4 OTU domain-containing protein 4 1 T(0.646)PS(0.354)QIIR 59.35 0.03235 15963000.0 1662.9 1600.8 1862.7 1560.0 2305.5 1972.4 1753.6 1811.7 1639.5 1782.5 1742.7 True False 1831.7163838377203 1735.7050340080891 1989.114023325036 1656.3576569829436 2143.5696335432194 1956.3374283471367 1820.334207606739 1775.5642222488443 1570.5975165148295 1669.9526457966472 1528.358947885495 1.1984857263877209 1.1356658306018101 1.301470460245613 1.083749114875492 1.4025302344772324 1.280024846946953 1.1910384076497185 1.1617455602987512 1.0276365500969338 1.0926442692713312 1.0 10.577767696830646 -8.628003406877365 1.9189055225395657 1.0098053064387238 1.2312389572464377 0.4809246715037271 0.08372486140841452 0.15561225661623743 1.127025402991194 0.014145276024568195 0.015987651662592334 2.3550308094899013e-09 8.628003406877365 0.22143365080771393 T(ph)PSSEEIS(ph)PTKFPGLYR ddPTM_A549_PD325901_60min_R1 1 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 2 T(0.938)PS(0.05)S(0.016)EEIS(0.498)PT(0.498)KFPGLYR 77.045 0.00021902 8690800.0 2549.6 2814.2 2994.8 2984.7 3184.2 2957.7 3060.8 2915.2 2878.0 3687.6 3603.4 True False 2808.4335150836823 3051.36251043576 3198.0451371953704 3169.058140254483 2960.552776893653 2933.6134718223107 3177.280418934027 2857.05404906984 2757.0476685145945 3454.764306670247 3160.20464383462 0.8886872312407922 0.9655585173538667 1.011974064222257 1.002801557942501 0.9368231208284322 0.9282985763423973 1.0054033763708057 0.9040724798135431 0.8724269404177474 1.093209046892041 1.0 11.625802269990363 -6.831671407540076 24.993952200026076 0.9397163264672924 0.9703298381415593 0.0 0.06531250188658035 114.58345836147616 40775.83882170111 0.008344559333882834 0.01576974154904378 1.4734268934145675e-07 6.831671407540076 0.030613511674266847 T(ph)PSSEEISPTK ddPTM_A549_PD325901_60min_R1 1 TPSSEEISPTK 11 0 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.589)PS(0.393)S(0.018)EEISPTK 87.573 0.00032556 33449000.0 6733.4 7676.0 7501.9 7454.5 8613.2 7572.7 8145.5 7049.3 7624.7 7803.2 9970.3 True False 7416.969811132905 8322.883458924345 8011.0240465894085 7914.947534602154 8008.238545926893 7511.030441920681 8455.481459888631 6908.696181431135 7304.260374608486 7310.504620297553 8744.016306939087 0.8482337578953206 0.9518375957647129 0.9161721302180109 0.9051844434829107 0.9158535694371596 0.8589909005499073 0.9670020232211278 0.7901055920891322 0.8353438646737155 0.8360579811014388 1.0 13.094080376193201 -10.95937041597579 1.2628947192751474 0.9991423389433985 0.8851471638867924 0.0 0.06876151185581215 0.36059185893838663 1.0349500770444098 0.034650819979715974 0.008309034936666184 1.0980688812611348e-11 10.95937041597579 -0.11399517505660617 T(ph)PSSEEISPTKFPGLYR ddPTM_A549_MK2206_60min_R1 2 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.894)PS(0.094)S(0.012)EEISPTKFPGLYR;T(0.536)PS(0.422)S(0.042)EEISPTKFPGLYR 156.92 1.5319e-22 116228000.0 5160.1 6031.4 6007.4 5806.0 7104.8 5643.3 5852.9 6110.5 9096.7 8296.6 8773.8 True False 6030.998727667383 6338.3724978076925 6859.339652596802 7228.47026064124 6059.693331671652 6240.470260280634 6916.296168835262 6976.682087621414 7036.311974444909 6422.392297761056 6595.023315438728 0.9144772412781343 0.9610841682651486 1.0400781505259153 1.0960492351436626 0.9188281893539503 0.9462393022435421 1.048714437846557 1.057870723715144 1.066912372845315 0.9738240474035098 1.0 12.687162044519251 -7.779571124712758 24.992197319979354 1.0359556604476856 0.9839231125674555 0.16234888579556428 0.05517076595393334 339.060867577827 467349.1183546451 0.008868808350987686 0.012266493949288165 1.6612265952397806e-08 7.779571124712758 -0.05203254788023015 T(ph)PSSEEISPTKFPGLYR ddPTM_A549_PD325901_60min_R1 1 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.843)PS(0.15)S(0.007)EEISPTKFPGLYR 136.68 7.101399999999999e-13 100010000.0 3417.0 3871.5 3940.5 3300.6 4145.5 3990.0 4207.4 3945.1 3559.6 3974.7 4278.9 True False 3763.891324537549 4197.76489203043 4207.926026151451 3504.4705657935274 3854.3343811986174 3957.506762880285 4367.514909377624 3866.4118856289215 3410.0023908424414 3723.736763673453 3752.6224261819225 1.003002939564877 1.1186217037831365 1.121329445987662 0.9338724144861876 1.0271042336439322 1.054597642243166 1.1638567415963879 1.0303226508089633 0.9086985056239518 0.9923025396035222 1.0 11.87368342400023 -8.582567359598396 7.091614103699192 0.957223409476776 1.061237797242449 0.2916514212919866 0.0630227542467383 0.18511824950101 18.042187945073476 0.011306638095662326 0.0128356812729703 2.6147648634987667e-09 8.582567359598396 0.10401438776567296 T(ph)PSSPSKSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_A549_MK2206_60min_R1 4 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.327)PS(0.327)S(0.31)PS(0.012)KS(0.012)PAS(0.012)FEIPASAMEANGVDGDGLNKPAK;T(0.266)PS(0.266)S(0.266)PS(0.065)KS(0.065)PAS(0.065)FEIPAS(0.008)AMEANGVDGDGLNKPAK;T(0.329)PS(0.329)S(0.305)PS(0.017)KS(0.017)PAS(0.004)FEIPASAMEANGVDGDGLNKPAK;T(0.297)PS(0.297)S(0.297)PS(0.05)KS(0.05)PAS(0.009)FEIPASAMEANGVDGDGLNKPAK 60.955 0.00060195 212115000.0 3073.3999999999996 3200.1800000000003 3863.5699999999997 3257.01 4491.700000000001 3247.14 3084.4 3484.59 4833.63 4468.6 5452.6 True False 3592.114782584241 3363.0554929260584 4411.482322066687 4054.977596212737 3830.97688011901 3590.7501995229127 3644.7955548797167 3978.541303609317 3738.8205227210024 3459.140156422516 4098.568935895646 0.8764314663891992 0.8205438399418166 1.0763469862445196 0.9893642536298141 0.9347108564081867 0.8760985250424338 0.8892849216120925 0.9707147460092433 0.9122258478992671 0.84398730642958 1.0 12.000904548177559 -10.83786887136256 0.9124061743584542 1.0032660798329027 0.9280470530544959 0.0 0.07966314653380292 1.087271172985928 1.4873252821014433 0.05754853615274183 0.011854679852686265 1.4525501268824215e-11 10.83786887136256 -0.07521902677840686 T(ph)PSSPSKSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_A549_PD325901_60min_R1 4 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.342)PS(0.342)S(0.31)PS(0.002)KS(0.002)PAS(0.001)FEIPASAMEANGVDGDGLNKPAK;T(0.276)PS(0.276)S(0.276)PS(0.053)KS(0.053)PAS(0.057)FEIPAS(0.01)AMEANGVDGDGLNKPAK;T(0.294)PS(0.294)S(0.272)PS(0.063)KS(0.063)PAS(0.015)FEIPASAMEANGVDGDGLNKPAK;T(0.317)PS(0.317)S(0.317)PS(0.025)KS(0.011)PAS(0.011)FEIPAS(0.002)AMEANGVDGDGLNKPAK 95.26 1.6472e-09 179260900.0 3872.35 4282.57 5253.26 4904.150000000001 5516.5 5369.95 5593.96 6044.94 4885.27 5772.22 5885.8 True False 4265.4681213266 4643.477203580724 5609.777814018618 5207.068207367244 5129.040070891854 5326.2189076012455 5806.841208932368 5924.3689295363065 4679.95909088405 5407.761044106774 5161.88391316029 0.8263394127194016 0.8995702502611728 1.0867694640936068 1.008753450284257 0.9936372373302119 1.0318362437446493 1.1249461062322132 1.1477144835497077 0.9066378030998399 1.047633215911659 1.0 12.333681981345583 -5.554654419831545 7.213642873401676 0.9968194499784437 0.8437318653316411 0.3834088713188516 0.07367076470936812 0.14964815416059968 25.675210709981094 0.01180776746272375 0.0475922341133816 2.788339044838474e-06 5.554654419831545 -0.1530875846468026 T(ph)PSSPSKSPASFEIPASAMEANGVDGDGLNKPAKK ddPTM_A549_MK2206_60min_R1 5 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKK 35 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.341)PS(0.341)S(0.299)PS(0.017)KS(0.002)PASFEIPASAMEANGVDGDGLNKPAKK;T(0.32)PS(0.32)S(0.32)PS(0.011)KS(0.011)PAS(0.018)FEIPASAMEANGVDGDGLNKPAKK;T(0.35)PS(0.35)S(0.287)PS(0.013)KS(0.001)PASFEIPASAMEANGVDGDGLNKPAKK;T(0.299)PS(0.299)S(0.299)PS(0.072)KS(0.017)PAS(0.014)FEIPASAMEANGVDGDGLNKPAKK;T(0.349)PS(0.349)S(0.29)PS(0.012)KS(0.001)PASFEIPASAMEANGVDGDGLNKPAKK 205.35 1.1364e-89 86073600.0 5280.030000000001 6382.999999999999 5466.62 5912.89 7408.360000000001 5623.26 6002.01 4853.12 8376.65 8890.84 8884.83 True False 6171.169979660401 6707.867436002669 6241.868916948888 7361.548315439721 6318.600057795151 6218.309640782114 7092.497525724161 5541.064622056663 6479.35214976133 6882.393069043447 6678.481502166621 0.9240378935927817 1.0044000921207186 0.9346239732675627 1.1022787609805462 0.946113282749272 0.9310963336148765 1.061992538786433 0.8296892969246139 0.970183438804062 1.0305326243414277 1.0 12.705304396593467 T(ph)PSSPSKSPASFEIPASAMEANGVDGDGLNKPAKK ddPTM_A549_PD325901_60min_R1 4 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKK 35 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.322)PS(0.322)S(0.272)PS(0.081)KS(0.003)PASFEIPASAMEANGVDGDGLNKPAKK;T(0.335)PS(0.335)S(0.305)PS(0.019)KS(0.005)PASFEIPASAMEANGVDGDGLNKPAKK;T(0.297)PS(0.297)S(0.274)PS(0.096)KS(0.032)PAS(0.002)FEIPASAMEANGVDGDGLNKPAKK;T(0.324)PS(0.324)S(0.324)PS(0.027)KS(0.002)PASFEIPASAMEANGVDGDGLNKPAKK 142.8 4.1687e-40 104662800.0 10347.400000000001 8354.400000000001 11030.1 10705.6 12744.0 12395.8 11947.3 12810.699999999999 11531.1 12361.7 12428.1 True False 11397.86043064673 9058.454607769358 11778.66891537954 11366.860597818342 11848.905404413259 12294.852714614395 12401.96103931341 12555.180538700271 11046.48796748041 11581.180152339077 10899.522488216968 1.045721080255442 0.8310872900681737 1.0806591690702947 1.0428769342974975 1.0871031659618695 1.128017555622814 1.137844437930255 1.1519018885710974 1.0134836621900016 1.062540140162931 1.0 13.411977310976267 -4.901359744756631 21.641844298802184 1.0322180174991442 2.887440901397043 0.0 0.08680869025858012 15891.123347114233 3853479.491270719 0.012101197905342408 153489.57019718378 1.2549899709695693e-05 4.901359744756631 1.8552228838978988 T(ph)PSSSQPER ddPTM_A549_MK2206_60min_R1 2 TPSSSQPER 9 0 O43395;O43395-3 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 T(0.993)PS(0.005)S(0.002)S(0.001)QPER;T(0.994)PS(0.005)S(0.001)SQPER 79.20100000000001 0.0018777000000000002 25621000.0 1626.01 1793.99 1729.96 1249.03 1669.26 1975.0500000000002 1181.77 1684.98 2228.17 2418.7 2843.8 True False 1900.4407358722585 1885.2964282491669 1975.2943412135642 1555.0424060710873 1423.7140652553503 2184.0484800679164 1396.4823119213474 1923.8310750348323 1723.4930526563369 1872.3139901398952 2137.605975112796 0.8890510028500351 0.8819662979046851 0.9240684972867055 0.727469152021355 0.6660320385660526 1.0217264105245916 0.65329266861151 0.8999933090724621 0.8062725650668116 0.8758929437597114 1.0 11.061780230265185 -10.74724117008948 0.8095852722393977 1.0097429234329973 0.8272368745527052 0.08261458856425996 0.11283271139286571 0.7727257128425844 0.8199915508777496 0.09099493293259442 0.018884111757379213 1.789611780404333e-11 10.74724117008948 -0.1825060488802921 T(ph)PSSSQPER ddPTM_A549_PD325901_60min_R1 2 TPSSSQPER 9 0 O43395;O43395-3 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 T(0.999)PS(0.001)SSQPER;T(0.992)PS(0.007)S(0.001)SQPER 101.3 0.00078371 32111000.0 2673.3 2967.2 2963.7 2824.9 2932.0 2607.0 2345.8999999999996 2563.4 2664.9 2839.1 2928.5 True False 2944.6914480205537 3217.256357389305 3164.8345041758803 2999.387657186616 2726.066434850885 2585.7694563480954 2435.174508225736 2512.2709760516027 2552.903520439382 2659.838741476162 2568.313065291026 1.1465469252234166 1.2526729707792632 1.2322619648462756 1.167843475829043 1.0614229517778757 1.0067968314661404 0.9481610871880982 0.9781794166775097 0.9940001298673853 1.0356364951851245 1.0 11.326605355585793 -6.829316663322902 2.0176500419112817 0.9919781790164798 1.2149339716878496 0.904948501890559 0.031395810706152535 0.057755983773231025 0.47810716490034405 0.004162878805492202 0.009287086866943567 1.481437509608967e-07 6.829316663322902 0.22295579267136978 T(ph)PSTPVACSTPAQLKR ddPTM_A549_MK2206_60min_R1 1 TPSTPVACSTPAQLKR 16 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 T(0.794)PS(0.118)T(0.089)PVACSTPAQLKR 68.187 0.0012568 5440500.0 1435.8 1723.4 1802.1 1699.2 2318.5 1904.4 1720.0 1723.0 2672.8 2164.0 2698.9 True False 1678.1279380602753 1811.1136987634347 2057.664877974614 2115.5040762799863 1977.4517212983774 2105.922343961591 2032.5017359593794 1967.240526466198 2067.4150675845463 1675.1508970367286 2028.6886441493527 0.8271983692026478 0.8927509423324301 1.0142832336094685 1.0427938670534809 0.9747438213356493 1.0380707507950897 1.0018795845390192 0.9697104245836992 1.019089387396572 0.8257308985623737 1.0 10.986331747090286 -5.6219609180050085 3.2126176021743507 1.0083977031189952 0.8362929141671392 0.38666576052177926 0.05928998668317881 0.05363920154764047 1.043756070688587 0.002909138346551639 0.01507449694618772 2.3880261708096374e-06 5.6219609180050085 -0.172104788951856 T(ph)PSTVT(ph)LNNNSAPANR ddPTM_A549_MK2206_60min_R1 1 TPSTVTLNNNSAPANR 16 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 2 T(0.949)PS(0.048)T(0.007)VT(0.987)LNNNS(0.008)APANR 75.018 0.001967 3754600.0 930.66 855.07 881.75 1056.7 1578.0 1285.9 1122.4 978.39 1761.7 1534.6 1806.1 True False 1087.7326555475533 898.5894107007365 1006.7954087753825 1315.591547437065 1345.8782903639594 1421.9730844886633 1326.325551419075 1117.07977869371 1362.6777628568148 1187.932794174012 1357.595524175829 0.8012199776571123 0.6618977410420187 0.7416018916139173 0.9690600211986822 0.991369127547041 1.0474202803164931 0.9769666500810413 0.8228369634408366 1.0037435588070835 0.8750270408376486 1.0 10.406837998276412 -6.264636711707237 4.515774044245645 0.988702605921176 0.724204968054893 0.6603844091274369 0.07020674437327984 0.06580514749814888 3.616161048669586 0.008595411487729314 0.022144932907561504 5.43704951712784e-07 6.264636711707237 -0.264497637866283 T(ph)PSTVTLNNNSAPANR ddPTM_A549_MK2206_60min_R1 2 TPSTVTLNNNSAPANR 16 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 T(0.56)PS(0.431)T(0.008)VT(0.001)LNNNSAPANR;T(0.547)PS(0.398)T(0.055)VTLNNNSAPANR 155.98 3.5019e-20 11644500.0 3088.8 4061.2 3789.3999999999996 3311.2 4593.5 3756.4 3690.1 3575.2 5164.0 5159.1 5146.2 True False 3610.1139260903888 4267.897733212288 4326.793900780758 4122.444148645414 3917.8022349726566 4153.899754703488 4360.543404571923 4081.9955485908004 3994.3622452134828 3993.655726849436 3868.2565121054477 0.9332664250141585 1.1033130093250512 1.1185385165746762 1.0657111636067835 1.0128082826751945 1.0738428906418536 1.1272632491991927 1.0552546181507019 1.0326001475634814 1.0324175023945699 1.0 11.917467750746793 -9.13769330303545 1.4615795627570602 1.0101402228790093 1.0654052501227624 0.09836738639504083 0.05159081673156971 0.44569136217165906 1.9604564093971428 0.010784181332737211 0.009964188484753249 7.282939411399926e-10 9.13769330303545 0.05526502724375315 T(ph)PSVAKSPEAK ddPTM_A549_PD325901_60min_R1 1 TPSVAKSPEAK 11 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2 Q9UI08-4 EVL Ena/VASP-like protein 1 T(0.799)PS(0.09)VAKS(0.11)PEAK 50.563 0.010399 45339000.0 2727.5 2410.3 2461.9 2684.1 3726.1 3293.6 3096.0 3653.4 2887.5 3666.7 3452.6 True False 3004.3937921206248 2613.424439948587 2628.979338607347 2849.890760966616 3464.3915903471643 3266.7780135895996 3213.8199741962053 3580.5300709631424 2766.1484165517327 3435.1839362370624 3027.9520878346557 0.9922197263924087 0.8630996674116779 0.8682367693893659 0.9411941398995601 1.144136858791783 1.0788737466205196 1.0613840249019486 1.1824923139796593 0.9135377100797709 1.1344908494551595 1.0 11.56412666198368 -6.5319833087390915 24.988422659414024 1.0046744571845005 0.9035998983969229 0.2422761051121931 0.09328100640883154 259.22056092726075 711456.8316355092 0.014152122186064172 0.02949214283352388 2.937762556962859e-07 6.5319833087390915 -0.10107455878757765 T(ph)PT(ph)PPPR ddPTM_A549_MK2206_60min_R1 1 TPTPPPR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)PT(1)PPPR 99.44200000000001 0.042986 8552400.0 674.28 739.7 626.1 828.39 725.41 451.97 489.59 636.12 863.4 1243.7 1224.4 True False 788.0819794367482 777.3475704858495 714.8903945951422 1031.3455871878402 618.7031499448165 499.7971654065954 578.5421656443914 726.291958035797 667.8412785664838 962.7473062128369 920.3476882791009 0.856287237392134 0.844623809442453 0.7767612215464678 1.1206043110906132 0.6722493659995928 0.5430525569539204 0.6286126134854212 0.7891495434663869 0.725640197798766 1.0460691306923542 1.0 9.846035174200374 -3.9825685015444865 13.785996603483914 0.8254499847131351 24.492180400417084 0.0 0.17140838057492008 0.0 0.0 0.02327166775042461 0.0 0.00010409539043532085 3.9825685015444865 23.66673041570395 T(ph)PTAEER ddPTM_A549_MK2206_60min_R1 2 TPTAEER 7 0 A0A1B0GTY1;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1;F8WCB8 A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 T(0.997)PT(0.003)AEER;T(0.997)PT(0.003)AEER 67.89699999999999 0.02456 18309400.0 975.31 1225.82 999.9100000000001 766.2 771.3199999999999 290.18 187.55 412.25 557.58 1252.25 1665.66 True False 1139.9184839598609 1288.2090020994508 1141.7122735339867 953.9190343960252 657.8598497614252 320.88665499410524 221.62540731347784 470.68769996267594 431.2890202722954 969.3658552746033 1252.0306521226457 0.9104557320759566 1.02889573822771 0.9118884362761971 0.7618975084825492 0.5254343003872264 0.2562929705036263 0.177012764773564 0.3759394381956142 0.3444716146055244 0.7742349227881736 1.0 10.29005416731921 -6.445053473450282 2.680068742360609 0.577891594853385 0.9622906456895194 0.4054970006852424 0.23160418967132465 0.3442177946414057 4.813958866331724 0.04644639423861967 0.1189624005486367 3.588777443236946e-07 6.445053473450282 0.38439905083613435 T(ph)PTAEER ddPTM_A549_PD325901_60min_R1 2 TPTAEER 7 0 A0A1B0GTY1;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1;F8WCB8 A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 T(0.998)PT(0.002)AEER;T(0.999)PT(0.001)AEER 69.812 0.023035 40284000.0 836.61 958.51 787.81 807.99 1085.3700000000001 750.9100000000001 949.9 656.86 911.5 1023.13 1021.72 True False 921.5420313202699 1039.2870015911374 841.2755240863783 857.8977072215692 1009.1373555232294 744.794837923417 986.0489643052254 643.7584120032982 873.1928248266339 958.5293971915414 896.0549172167136 1.0284436964898571 1.1598474397298382 0.9388660314476163 0.9574164381423556 1.126200343454135 0.8311932936397091 1.100433628965563 0.7184363364724478 0.9744858356884052 1.0697217087641049 1.0 9.807443344343636 -5.771036768744455 24.999816992719254 0.971534385113386 1.0941455781278329 0.15106473079207694 0.11467368944444485 220.12354098419905 573395.9120622071 0.013768178941686306 0.043595709380281344 1.6941943585223801e-06 5.771036768744455 0.1226111930144469 T(ph)PTAEERER ddPTM_A549_MK2206_60min_R1 1 TPTAEERER 9 1 A0A1B0GTY1;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1;F8WCB8 A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 T(0.995)PT(0.005)AEERER 84.507 0.00053368 5571000.0 560.16 533.61 347.54 493.82 581.4 326.69 289.91 85.796 733.13 1075.4 1199.0 True False 654.7013134028724 560.7684697674111 396.8263979198146 614.8059221684218 495.8768301759228 361.2601189607287 342.5828943441767 97.9578457392304 567.0772255680407 832.4663931022633 901.2552092834387 0.7264327647253279 0.6222082979284652 0.4403041378649223 0.6821662896764122 0.5502068948596478 0.4008410883394015 0.3801175192280488 0.10869046273487148 0.6292082639044129 0.9236744315343627 1.0 9.815791882974969 -9.91125371479553 1.0161115990879415 0.9482764059651017 0.49900748881274654 0.5224740988927885 0.16727380680158188 0.27128256149808716 0.5700683029537982 0.06133956821249117 0.03479114368206993 1.2267223706901687e-10 9.91125371479553 -0.4492689171523551 T(ph)PTLASPVPTTPFLR ddPTM_A549_MK2206_60min_R1 1 TPTLASPVPTTPFLR 15 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 T(0.962)PT(0.036)LAS(0.001)PVPTTPFLR 45.863 0.040264 1568700.0 711.8 728.54 787.6 674.72 1426.2 927.57 614.6 545.84 1111.0 1226.5 1466.2 True False 831.9344381608196 765.6195741540628 899.2935230524422 840.026430289332 1216.4078692757166 1025.7248417288665 726.2648644887414 623.2144915648922 859.3602739024359 949.432798158755 1102.1020749385973 0.7548615115411793 0.6946902574307544 0.8159802467503253 0.7622038370049646 1.1037161592708986 0.9306985850525814 0.6589814872902808 0.5654780130956691 0.7797465347756599 0.8614744675184935 1.0 10.10604213487594 -10.53170865113329 1.008655484997011 0.9913368367536326 0.7888732194930457 0.11441975808800042 0.1395021372579495 0.5975604905405941 1.1494799849777158 0.07780619795905722 0.026033289640601736 2.939621051744406e-11 10.53170865113329 -0.20246361726058693 T(ph)PTLASPVPTTPFLR ddPTM_A549_PD325901_60min_R1 1 TPTLASPVPTTPFLR 15 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 T(0.968)PT(0.032)LAS(0.001)PVPTTPFLR 68.168 0.0028791999999999997 2066500.0 1617.2 1743.8 1332.1 1554.2 1600.3 1654.0 1519.4 1585.7 1649.2 2115.5 1628.8 True False 1781.3769534802832 1890.7561458666326 1422.5043165680363 1650.1994041557004 1487.9004487352906 1640.5303723819532 1577.221598447582 1554.0719695424154 1579.889859247487 1981.9269689665111 1428.467925813906 1.2470542189215053 1.323625201307426 0.9958251710534755 1.1552232810655916 1.0416057804640741 1.1484544684104259 1.1041351156337094 1.087929201250314 1.1060030335278999 1.3874494016638543 1.0 10.480252927664608 -2.0000000000000004 0.2921374040598286 1.044870506567706 2.918379293782632 0.0 0.12512092946966072 29.762926153292824 0.3716840134761291 0.024796780654641824 29.371020071358206 0.00999999999999999 2.0000000000000004 1.8735087872149259 T(ph)PTPEPAEVETR ddPTM_A549_MK2206_60min_R1 2 TPTPEPAEVETR 12 0 Q9UHY1;F8W6G1 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 T(0.998)PT(0.002)PEPAEVETR;T(0.584)PT(0.416)PEPAEVETR 155.88 9.7715e-14 209200000.0 3677.6000000000004 3611.3 3252.5 3284.2 4305.5 3618.5 2834.2 3097.8 4651.7 4147.1 4643.8 True False 4298.288971312491 3795.0997448905605 3713.753407475963 4088.8291474333405 3672.1666534613614 4001.4072682340984 3349.1374535209743 3536.922636614618 3598.0973772384887 3210.267229713961 3490.61629764006 1.2313839748638324 1.0872291370026421 1.0639248461616253 1.171377429881858 1.0520109746648592 1.146332603483051 0.9594688066360267 1.0132659493413427 1.0307914334987476 0.9196849369792842 1.0 11.769266063519009 -7.753345816039165 24.999975559762614 1.0110389995251263 1.1196054299929614 0.5821416137302295 0.05730994813397219 102.16859377056218 315584.50518941093 0.007196638638186153 0.010570441216738568 1.7646321359648854e-08 7.753345816039165 0.1085664304678351 T(ph)PTPEPAEVETR ddPTM_A549_PD325901_60min_R1 2 TPTPEPAEVETR 12 0 Q9UHY1;F8W6G1 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 T(0.818)PT(0.182)PEPAEVETR;T(0.584)PT(0.416)PEPAEVETR 101.72 0.00023569 239900000.0 8249.1 6601.799999999999 4979.6 5963.8 6524.6 6502.0 5225.4 5449.799999999999 6114.7 6623.6 9646.0 True False 9086.542559333542 7158.156855019115 5317.545600767356 6332.170381227491 6066.334604648057 6449.049867731225 5424.255456448595 5341.099463714603 5857.720423442038 6205.384765609354 8459.603151032003 1.0741097894438534 0.8461575238486073 0.6285809754703042 0.7485186087547165 0.7170944660575496 0.7623347989963919 0.64119502529937 0.6313652506338944 0.6924344226156097 0.733531426335566 1.0 13.04637427123817 -10.740169180758512 1.0173602474017587 0.9984457374398181 0.7400177442330478 0.0 0.14295645671419585 0.44848210055889104 0.8323230288829593 0.08182546515184952 0.02154361679446134 1.8189921265662997e-11 10.740169180758512 -0.25842799320677035 T(ph)PTPEPAEVETRK ddPTM_A549_MK2206_60min_R1 2 TPTPEPAEVETRK 13 1 Q9UHY1;F8W6G1 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 T(0.992)PT(0.008)PEPAEVETRK;T(0.976)PT(0.024)PEPAEVETRK 117.4 9.4651e-06 49651000.0 7587.6 8195.2 7080.799999999999 6386.4 10389.3 6780.700000000001 6773.3 6336.1 9720.5 11349.8 13215.9 True False 8868.201380990493 8612.30067547064 8084.9639131916365 7951.068286696391 8861.04773262249 7498.229173335623 8003.920934984696 7234.261578492444 7518.822270448809 8785.87229722156 9934.027289715596 0.8927095851821828 0.8669495688205628 0.8138656838160451 0.8003871999554396 0.8919894695473678 0.7548025543576187 0.8057075646722773 0.7282304917746563 0.7568755401178355 0.8844220013687011 1.0 13.278162994662855 -10.830658276752272 1.0880876914691096 0.9995177949077072 0.8085739942659633 0.35497218722580004 0.061113801471739865 0.2654173314598228 0.5600773865695191 0.03812741896903202 0.00949435950259621 1.4768681452676383e-11 10.830658276752272 -0.19094380064174388 T(ph)PTPEPAEVETRK ddPTM_A549_PD325901_60min_R1 2 TPTPEPAEVETRK 13 1 Q9UHY1;F8W6G1 Q9UHY1 NRBP1 Nuclear receptor-binding protein 1 T(0.968)PT(0.032)PEPAEVETRK;T(0.695)PT(0.305)PEPAEVETRK 102.64 8.0803e-05 73133000.0 17827.7 17007.7 14793.3 16289.7 16890.1 17782.6 15551.8 17819.3 16479.699999999997 17966.6 23156.0 True False 19637.554979940913 18440.99856752833 15797.262297339492 17295.877772407086 15703.797643681779 17637.784401402238 16143.632259271493 17463.88008252958 15787.115518700477 16832.185809800863 20307.958797978143 0.9669881239810288 0.9080675586836583 0.7778852840154602 0.8516797746373732 0.7732829182835079 0.868515864979904 0.7949411568078792 0.8599525071061441 0.7773856385936847 0.8288467579260932 1.0 14.309757617705154 -10.911094560305356 1.1318604437617907 1.001145422970835 0.8352289646233602 0.0 0.07600579062396338 0.3232990508963769 0.7272939507200245 0.042507346466606734 0.009805998667559292 1.2271720060417236e-11 10.911094560305356 -0.16591645834747482 T(ph)PTPEPFDSETR ddPTM_A549_MK2206_60min_R1 2 TPTPEPFDSETR 12 0 Q9NSY0;H0YCB1;Q9NSY0-2;Q9NSY0-4 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 1 T(0.558)PT(0.442)PEPFDSETR;T(0.812)PT(0.188)PEPFDSETR 85.845 0.00038334 5228100.0 1534.4 1452.71 1395.0 1473.4099999999999 2155.5 1799.0900000000001 1504.25 1734.4 2246.77 2069.24 2136.71 True False 1793.3692075217223 1526.6467339739047 1592.8319764577927 1834.3955161438878 1838.4288053735834 1989.4685096607107 1777.552753672615 1980.256511377234 1737.8801823544343 1601.7972468504067 1606.1059368040178 1.1165945946818046 0.9505267983827838 0.991735314562974 1.1421385564355377 1.1446497788507424 1.2386907140257162 1.106746891932769 1.2329551033960664 1.0820457994275479 0.9973173065020948 1.0 10.649351339074789 -4.284465236333769 14.306657344105252 1.0743583687210456 1.0871866966000265 0.0 0.09448925437468408 0.0 0.0 0.013226729282147099 0.0 5.1943925103285494e-05 4.284465236333769 0.012828327878980916 T(ph)PTPEPFDSETR ddPTM_A549_PD325901_60min_R1 2 TPTPEPFDSETR 12 0 Q9NSY0;H0YCB1;Q9NSY0-2;Q9NSY0-4 Q9NSY0 NRBP2 Nuclear receptor-binding protein 2 1 T(0.567)PT(0.43)PEPFDS(0.002)ETR;T(0.58)PT(0.42)PEPFDSETR 99.5 0.00026312 5187500.0 1779.87 1639.51 1655.69 1655.51 2292.5 1637.22 1612.78 1594.77 1743.62 2194.94 2132.1 True False 1960.5610921289594 1777.6772615608447 1768.0550798727809 1757.7670927639965 2131.4827086956548 1623.8870231385608 1674.1552254470782 1562.961061277137 1670.341715001883 2056.351113809196 1869.8652164954735 1.048503964260841 0.9506980748551446 0.9455521522489698 0.9400501582988036 1.139912486682066 0.8684513775715191 0.8953347068430967 0.8358683008214142 0.8932952494471552 1.0997322671541196 1.0 10.868718566271456 T(ph)PTSPKTLVK ddPTM_A549_PD325901_60min_R1 1 TPTSPKTLVK 10 1 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 T(0.636)PT(0.075)S(0.288)PKT(0.001)LVK 64.55 0.0023745999999999997 5843200.0 1979.4 2289.1 2689.7 3436.5 3536.2 5145.0 4165.3 3738.9 3481.0 2639.9 2673.3 True False 2180.347230842735 2482.0104905971484 2872.2392164800294 3648.7648001422344 3287.829511227731 5103.100825819313 4323.812770839618 3664.324706389694 3334.705675503581 2473.216263471849 2344.501047444936 0.9299834748288563 1.0586519009245365 1.225096154087979 1.5563076007659284 1.4023578768756984 2.1766255260925265 1.844235802560958 1.5629443673668293 1.4223519665891304 1.0549008993479394 1.0 11.19506520826903 -3.353613031546934 15.86311634726292 1.3337818049675911 1.186971471772559 0.0 0.37237278022081977 0.0 0.0 0.05408336568278303 0.0 0.0004429829066469946 3.353613031546934 -0.14681033319503212 T(ph)PTSPLK ddPTM_A549_PD325901_60min_R1 1 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.433)PT(0.284)S(0.284)PLK 90.65700000000001 0.013249 1852200000.0 15045.0 15325.0 16279.0 14707.0 18991.0 19808.0 16680.0 18138.0 18617.0 17426.0 18348.0 True False 16572.357324456385 16616.491533092183 17383.790833579358 15615.417987979583 17657.137675393307 19646.690215321458 17314.766527646232 17776.22336101427 17834.592232361425 16325.71938606024 16091.312317554972 1.029894703266471 1.0326374384620116 1.0803215107952597 0.9704253873031718 1.0973087419433207 1.2209501517093613 1.0760319721565854 1.1047093618101693 1.1083367148933283 1.0145673058778146 1.0 13.973994368558236 -5.7454016930581115 21.645895935300995 1.0678121254227335 1.0312658630475655 0.05645354469497066 0.06358275852751367 150.2162821267564 202724.2318945512 0.009535300032048707 0.036548743218970524 1.797207850280284e-06 5.7454016930581115 -0.036546262375168004 T(ph)PTSSGKPSAK ddPTM_A549_PD325901_60min_R1 4 TPTSSGKPSAK 11 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 T(0.982)PT(0.006)S(0.006)S(0.006)GKPS(0.001)AK;T(0.985)PT(0.013)S(0.002)SGKPSAK;T(0.988)PT(0.006)S(0.006)S(0.001)GKPSAK;T(0.987)PT(0.012)S(0.002)SGKPSAK 81.431 0.0030204999999999997 33384000.0 13815.83 12336.62 11160.27 12759.670000000002 14672.5 12540.0 10503.68 14432.500000000002 13836.900000000001 14845.999999999998 23604.5 True False 15218.402890923518 13376.270262771652 11917.673034355344 13547.805836586893 13641.95421737709 12437.878397623748 10903.403290234237 14144.632465422783 13255.383212115903 13908.621026365785 20701.296141253886 0.7351425141248056 0.6461561716473974 0.5756969492652012 0.6544423954975747 0.6589903416816099 0.6008260696699729 0.5267014787787009 0.6832727945587487 0.6403165831583055 0.671871989631048 1.0 14.33743347954546 -10.568142454233687 0.662640775911006 1.027449353189647 0.6278374678219236 0.1269189711184574 0.10885769020862494 0.23100198348340392 0.1634491182734079 0.05146706614356381 0.01111349684021101 2.7030715760746395e-11 10.568142454233687 -0.3996118853677233 T(ph)PVKPSSVEEEDSFFR ddPTM_A549_MK2206_60min_R1 1 TPVKPSSVEEEDSFFR 16 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 T(0.999)PVKPS(0.001)SVEEEDSFFR 47.32 0.018925 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)PVSPVK ddPTM_A549_MK2206_60min_R1 2 TPVSPVK 7 0 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.892)PVS(0.108)PVK;T(0.983)PVS(0.017)PVK 83.005 0.015584 352490000.0 30773.0 32064.0 28609.0 25948.0 37042.0 30091.0 27957.0 29975.0 38416.0 39850.0 42908.0 True False 35966.73007238396 33695.92064358288 32666.186390308932 32305.261164849984 31593.17086924068 33275.2096472108 33036.42501873047 34224.04804458752 29714.837337746158 30847.857322973035 32252.75939944437 1.115152028604522 1.0447453573278873 1.012818344804063 1.001627822437001 0.9795493922850194 1.0317011712115411 1.024297630152526 1.0611199997100749 0.9213114750813558 0.9564408719554229 1.0 14.977134975793634 -8.755894431235912 24.999851509319058 0.9628415295891916 1.0302591651366322 0.4405373837523111 0.037232136529339675 113.25469262226981 510618.02008327266 0.007346392228573008 0.008216888755869562 1.754306888798799e-09 8.755894431235912 0.06741763554744062 T(ph)PVSPVK ddPTM_A549_PD325901_60min_R1 1 TPVSPVK 7 0 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.786)PVS(0.214)PVK 69.954 0.022922 210680000.0 30512.0 30738.0 31022.0 30986.0 36028.0 30990.0 32621.0 33071.0 32134.0 33866.0 37442.0 True False 33609.55577825276 33328.399135020394 33127.339470440354 32899.934845688134 33497.51756985256 30737.627714701746 33862.410005896134 32411.37296130239 30783.519728995125 31727.694980392265 32836.87136439358 1.0235309998106896 1.0149687759583514 1.00884579114811 1.0019205082175684 1.0201190362543295 0.9360705340531276 1.031231314034826 0.9870420540870233 0.9374681097778095 0.9662216180191868 1.0 15.003029055931483 -7.025278459008826 0.8170011608688326 0.9728065497684572 1.018968681083621 0.271779284361818 0.02706770647616267 0.7049920163306665 0.8943148764009783 0.0055067368627753225 0.016910354029058265 9.434557615354432e-08 7.025278459008826 0.04616213131516378 T(ph)PVSPVKFSPGDFWGR ddPTM_A549_MK2206_60min_R1 1 TPVSPVKFSPGDFWGR 16 1 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.596)PVS(0.398)PVKFS(0.006)PGDFWGR 89.831 4.3918e-06 33217000.0 4911.3 4199.0 3278.2 3071.5 5933.3 5093.9 4111.4 5104.4 6625.5 5804.8 5831.7 True False 5740.20737024337 4412.7111646209005 3743.0980539239663 3824.017637884876 5060.51942979498 5632.93311694284 4858.388161176392 5827.964331569392 5124.834828749405 4493.491648391314 4383.527943267916 1.3094948736574155 1.0066574735534202 0.8539008082912983 0.8723607303011908 1.154439870188752 1.2850227464829374 1.1083283200322132 1.3295145843702891 1.169111933373201 1.0250856630883982 1.0 12.09787672927099 -6.796859108675301 24.998546120763756 1.1230538061650417 0.9991282898262731 0.16284550658216224 0.1447469493465758 285.2732438959201 201339.41345379592 0.022447545338181128 0.04242299339207144 1.5963969571836155e-07 6.796859108675301 -0.12392551633876858 T(ph)PVSPVKFSPGDFWGR ddPTM_A549_PD325901_60min_R1 1 TPVSPVKFSPGDFWGR 16 1 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.619)PVS(0.355)PVKFS(0.026)PGDFWGR 98.76 1.0693999999999999e-06 49266000.0 14801.0 14455.0 15129.0 13930.0 13169.0 14752.0 14671.0 12500.0 15907.0 16609.0 19132.0 True False 16303.586624079682 15673.173579826911 16155.744918067574 14790.424462674619 12244.054870583668 14631.864603010019 15229.312933279245 12250.677693939706 15238.484108082568 15560.304905490335 16778.885287740453 0.971672810469236 0.9341010031982617 0.9628616347876113 0.8814902902686443 0.7297299350112266 0.8720403264036162 0.9076474790853115 0.7301246467720178 0.9081940693173828 0.9273741752593971 1.0 14.03435925246258 -9.900007126607155 1.0950065238287128 0.9858670645007663 0.8756602565566428 0.1356923589430966 0.07908115318962748 0.4600977115961002 1.1192172286154978 0.025796415771647062 0.015298613801648115 1.2589047534768052e-10 9.900007126607155 -0.11020680794412352 T(ph)QKTPPGLQHEYAAPADYFR ddPTM_A549_MK2206_60min_R1 2 TQKTPPGLQHEYAAPADYFR 20 1 Q5JRG1;H7BYF2;Q9BVL2-2;Q9BVL2-3;Q9BVL2 Q5JRG1 NUPL1 Nucleoporin p58/p45 1 T(0.463)QKT(0.463)PPGLQHEY(0.074)AAPADYFR;T(0.5)QKT(0.5)PPGLQHEYAAPADYFR 90.712 2.1250999999999998e-06 9549200.0 2322.1 3103.0 2730.2 2100.0 2657.5 2063.37 1818.88 2156.0 2678.0 3755.7999999999997 4889.1 True False 2714.013710105702 3260.9294460153983 3117.383413709723 2614.5000942725824 2266.585270368963 2281.714443845845 2149.346952035928 2461.6196024730843 2071.4372758872405 2907.3621714836154 3675.0015377044697 0.7385068229933223 0.8873273691341869 0.8482672406327607 0.7114282994030222 0.6167576386334653 0.6208744188093812 0.5848560687619421 0.6698281829864744 0.5636561657552749 0.7911186272046167 1.0 11.843529138267728 -10.928924208690292 1.1880323490364841 0.9998353205686955 0.6846518896688771 0.2596558601127862 0.11393713525506388 0.3128764788775911 0.7852779899255955 0.0801836279336046 0.018922671674639083 1.1778115024676395e-11 10.928924208690292 -0.3151834308998184 T(ph)QSAPLPQNAQALQHLVIQQQHQQFLEK ddPTM_A549_MK2206_60min_R1 1 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.548)QS(0.452)APLPQNAQALQHLVIQQQHQQFLEK 81.487 3.2620999999999997e-06 1919100.0 639.62 621.04 942.14 809.86 789.13 708.93 703.19 505.71 617.74 922.11 877.58 True False 747.5722187923899 652.6482833236877 1075.7496188530067 1008.2757363559974 673.0500223541895 783.9485020503514 830.9505207612077 577.3959411719218 477.82287632807436 713.8047105667913 659.6526660241539 1.1332815848348543 0.9893817109196528 1.6307818860745984 1.5284949008590505 1.0203097130051546 1.188426186125118 1.2596788636806353 0.8753029752035897 0.7243552568475156 1.0820917542394266 1.0 9.365562776510481 -8.265165870832844 8.837096113546062 0.8664987449954684 1.2542972170332565 0.3728267551393907 0.2012333861000359 0.08696074563776418 96.2372362931685 0.034070871967965384 0.04236768386531317 5.430428865833766e-09 8.265165870832844 0.38779847203778806 T(ph)QSAPLPQNAQALQHLVIQQQHQQFLEK ddPTM_A549_PD325901_60min_R1 1 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.572)QS(0.428)APLPQNAQALQHLVIQQQHQQFLEK 158.99 1.1695999999999998e-45 6153800.0 1044.7 1118.9 1199.3 855.27 1250.9 1409.8 1224.9 1608.1 1258.5 1182.5 1292.7 True False 1150.7571749325084 1213.1936297798914 1280.691709976763 908.0980854408986 1163.041099370728 1398.3190562176999 1271.5142397909988 1576.0251839699547 1205.6096215516393 1107.8367481932878 1133.7060951004635 1.0150401236314548 1.0701129993240304 1.1296505465671633 0.8009995618489 1.0258753167130719 1.2334052557896742 1.1215554412965587 1.3901532247035286 1.063423427607844 0.9771816108081494 1.0 10.14683096542045 -5.256823274111275 19.37982691247935 1.0649768471607903 1.0150396646715327 0.005929069352468508 0.1429123564362564 126.05532204937748 528661.8195461567 0.019558132762665676 0.1995228548958158 5.53575327802504e-06 5.256823274111275 -0.0499371824892576 T(ph)QSLSALPK ddPTM_A549_PD325901_60min_R1 1 TQSLSALPK 9 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 T(0.721)QS(0.243)LS(0.037)ALPK 140.45 4.366e-05 50578000.0 5549.7 5158.7 5576.6 6245.4 7296.9 6345.0 7983.1 11324.0 13500.0 16622.0 16442.0 True False 6113.1014585267885 5593.441753459228 5955.061610819988 6631.164173667488 6784.390916938411 6293.328423678042 8286.90123901994 11098.133936493856 12932.641947514598 15572.484083271736 14419.738234425484 0.4239398357407387 0.38790175400726223 0.4129798692602447 0.45986716720254595 0.4704933478432673 0.43643846520413504 0.5746915168845372 0.7696487797537354 0.8968707848412523 1.079942217404072 1.0 13.81575735471598 -8.346266858768724 1.0906142938792103 0.9661605147841639 0.4196269302516327 0.9699813900452986 0.042859488685752185 0.039413685326112856 0.09131056582252041 0.006490269977240984 0.008232757867211055 4.505397785342123e-09 8.346266858768724 -0.5465335845325312 down T(ph)QSPGGCSAEAVLAR ddPTM_A549_MK2206_60min_R1 1 TQSPGGCSAEAVLAR 15 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ESM2 HEXIM2 Protein HEXIM2 1 T(0.5)QS(0.5)PGGCSAEAVLAR 104.1 6.1433e-06 27370000.0 2733.6 3597.5 2332.5 2293.1 2941.0 2752.8 2284.5 2742.4 3684.3 4183.0 3861.4 True False 3194.964849896622 3780.597383835124 2663.2835735396416 2854.9096029411703 2508.382795919143 3044.0994688392484 2699.5640789530257 3131.1435982477688 2849.811932618131 3238.0573947803277 2902.5078107815434 1.1007601213091414 1.3025278932211184 0.9175801572856105 0.9836010061149305 0.8642122465964093 1.0487825243852071 0.9300798671153715 1.0787718078197563 0.9818447075430183 1.1156067807129975 1.0 11.503084234116628 -5.766969955448233 24.99982503707126 0.9841289132353659 1.2016440201519267 0.49751991853932764 0.08133344515319547 53.67516247418512 242632.8148633186 0.008611859489908622 0.027911660651733526 1.7101336182761674e-06 5.766969955448233 0.21751510691656084 T(ph)QSPGGCSAEAVLAR ddPTM_A549_PD325901_60min_R1 1 TQSPGGCSAEAVLAR 15 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ESM2 HEXIM2 Protein HEXIM2 1 T(0.865)QS(0.134)PGGCS(0.001)AEAVLAR 141.0 2.0894000000000002e-13 35971000.0 5206.5 5185.0 5657.2 6202.2 5768.6 6393.6 5627.1 6200.1 5700.0 6018.0 6048.2 True False 5735.060047177275 5621.958146759081 6041.131611507167 6585.295807781801 5363.43343658964 6341.532641391323 5841.242369767274 6076.434141615643 5460.448822283944 5638.022452961698 5304.309742698715 1.0812076076574297 1.0598849651451072 1.13891003816711 1.241499106805808 1.0111463501867153 1.195543425819038 1.1012257302295811 1.1455654809713447 1.0294362673296278 1.0629135036320856 1.0 12.372949308077882 -8.84600294151337 4.9920875136099685 1.012821325041467 1.122373382027522 0.2936172911683367 0.061478544402005696 0.14284296880177497 6.1054406820685525 0.009966926252725857 0.010581490783574496 1.4255979378737102e-09 8.84600294151337 0.10955205698605486 T(ph)QSSSCERDSPSTSR ddPTM_A549_PD325901_60min_R1 1 TQSSSCERDSPSTSR 15 1 A0A2R8YEK3;Q5JS79;A0A2U3TZM1;A0A2R8YE77;O14936-6;O14936-2;O14936 A0A2R8YEK3 CASK Peripheral plasma membrane protein CASK 1 T(0.3)QS(0.257)S(0.221)S(0.221)CERDS(0.001)PSTSR 40.856 0.037194 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)QTPPVS(ph)PAPQPTEER ddPTM_A549_MK2206_60min_R1 1 TQTPPVSPAPQPTEER 16 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 T(0.9)QT(0.1)PPVS(1)PAPQPTEER 193.42 6.445e-35 82942000.0 1857.7 2703.7 2262.9 1848.8 2609.3 2588.7 1661.6 2786.1 2683.9 2287.8 2498.2 True False 2171.23434359561 2841.306781563594 2583.8132469722846 2301.756082995785 2225.4754265188103 2862.6345157600113 1963.4912119012245 3181.0382070734036 2076.000935307605 1770.9843910538941 1877.8279931875625 1.1562477242178066 1.5130814919531326 1.375958424491442 1.2257544840880852 1.1851327355819878 1.5244391531839752 1.045618245667033 1.6939987147990465 1.1055330641778585 0.9431025618313932 1.0 10.874849204554609 -8.975951320080545 24.803277063883275 1.0465584303293458 1.3384440781132745 0.38867037229588974 0.18114168642436496 110.83635967410079 114315.45798134473 0.028529821636159913 0.029502196567241925 1.0569359741648582e-09 8.975951320080545 0.29188564778392867 T(ph)QTPPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A549_PD325901_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 T(0.456)QT(0.48)PPVS(0.104)PAPQPT(0.407)EERLPS(0.28)S(0.264)PVY(0.008)EDAASFK 51.216 0.0039871 4488700.0 1260.6 1149.9 1192.3 1297.0 1294.1 1152.3 1543.7 1865.9 1593.7 1743.6 1988.5 True False 1388.5751839953289 1246.8061085744012 1273.216647882343 1377.1127442992808 1203.2068804026367 1142.916050843847 1602.4463482450533 1828.6831607297675 1526.7223312410379 1633.5087984353634 1743.927106140072 0.7962346471400041 0.7149416418751724 0.7300859327202168 0.7896618725924381 0.6899410394886053 0.655369164697213 0.9188723213276008 1.0486006865145243 0.8754507719191399 0.9366841037587268 1.0 10.768124023281485 -7.845472371948473 6.425049082673553 0.9489645934106061 0.730077192780351 0.8057524468221211 0.05544290413263439 0.08111480264824304 5.048151784410253 0.009909773265376301 0.013765201265815112 1.4273406288919688e-08 7.845472371948473 -0.21888740063025514 T(ph)RESPLVPIGAVY(ph)T(ph)MYSDYVK ddPTM_A549_PD325901_60min_R1 1 TRESPLVPIGAVYTMYSDYVK 21 1 K7EID5 K7EID5 HIGD1B 3 T(0.745)RES(0.255)PLVPIGAVY(0.323)T(0.558)MY(0.323)S(0.473)DY(0.323)VK 43.93600000000001 0.048383999999999996 72923000.0 5879.9 5323.3 5328.4 3805.2 5286.0 4039.7 4277.1 4645.9 5388.2 4880.6 4865.6 True False 6476.823119446401 5771.913173122974 5690.017266272145 4040.2385617637797 4914.729595710025 4006.802022558266 4439.867381018923 4553.233879861956 5161.752691970234 4572.438083071595 4267.162045579656 1.5178291919229383 1.3526351030193677 1.3334429781419768 0.9468209828002793 1.1517560250146075 0.9389852036926754 1.0404731138856498 1.0670403024836241 1.2096453419942848 1.0715407650872257 1.0 12.059061182619711 -6.086912010939388 4.25286320318031 1.0789271364650848 1.4192785762041484 0.761241478078395 0.08677047337481507 0.09812711613443162 3.168693887644383 0.014134482991276315 0.040496645854775984 8.186306277819514e-07 6.086912010939388 0.3403514397390637 T(ph)RFSLLAAAER ddPTM_A549_PD325901_60min_R1 1 TRFSLLAAAER 11 1 Q8TDN4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 T(0.691)RFS(0.309)LLAAAER 112.96 1.4715e-05 4751200.0 393.29 692.05 589.01 570.13 651.43 749.2 618.77 490.84 538.78 734.51 630.57 True False 433.21651127520465 750.3714822496858 628.9837606048637 605.3456352408242 605.6758041114979 743.0987635964682 642.317630953936 481.0498111434689 516.1369502579196 688.1329132477393 553.0138875125701 0.7833736567155514 1.3568763808533282 1.1373742591420306 1.0946300787555983 1.0952271141612708 1.3437253211467992 1.1614855349167628 0.8698693143262781 0.9333164354686981 1.2443320661311565 1.0 9.111171900241839 -8.245231388627074 24.05910283727194 0.9602325954625683 1.151765793258452 0.08566810401279312 0.16857106711723763 457.67552984110523 679372.7163111181 0.021517281016117364 0.027728702202132208 5.685499312762243e-09 8.245231388627074 0.19153319779588363 T(ph)RHSPTPQQSNR ddPTM_A549_MK2206_60min_R1 2 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.858)RHS(0.141)PT(0.002)PQQSNR;T(0.496)RHS(0.365)PT(0.138)PQQSNR 58.885 0.004423600000000001 173228000.0 918.73 1113.3899999999999 1134.75 740.1700000000001 1106.83 681.96 708.76 738.78 801.3299999999999 1820.8 1452.15 True False 1073.7891632080489 1170.0567953268069 1295.674613107871 921.5116832274941 944.016773208835 754.1245545515893 837.53251766196 843.5043274188615 619.8300344610614 1409.4800153994802 1091.541077698871 0.9837368333143762 1.0719310699634488 1.1870140662404969 0.8442299626232813 0.8648476841558369 0.6908805998775553 0.7672936317042705 0.7727646211877729 0.5678485648636826 1.2912752842713635 1.0 10.092150708602638 -6.408070514182926 4.544979518026809 0.7854686078507387 1.0786550564045745 0.18157768792480888 0.18748035879525324 0.1774796978575371 5.848559191674009 0.022613538061734984 0.053941536539375445 3.9077744209838584e-07 6.408070514182926 0.2931864485538358 T(ph)RHSPTPQQSNR ddPTM_A549_PD325901_60min_R1 2 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.586)RHS(0.408)PT(0.006)PQQSNR;T(0.515)RHS(0.483)PT(0.002)PQQSNR 65.472 0.0030166999999999998 14366500.0 385.93 372.82000000000005 184.94 571.3199999999999 671.46 256.67 379.463 401.73 358.43 532.15 625.52 True False 425.1093294933501 404.23884981190395 197.4911405345639 606.6091388381379 624.2989660112471 254.57976461866735 393.9036721151209 393.7171799989118 343.36643357390085 498.5499581827128 548.5850054979828 0.7749197029318244 0.7368754992582282 0.3600009817171171 1.10577054195545 1.1380168246569815 0.46406621046371904 0.7180357978569819 0.7176958466837998 0.6259129034381955 0.9087925356803177 1.0 9.09957137924247 -10.93239526740136 1.1872790343245576 1.0001357932062902 0.7302341126595081 0.12124170038357562 0.22052895387133395 0.7078860740629043 1.771611001105957 0.15559339121965654 0.036503597163870076 1.1684354707859168e-11 10.93239526740136 -0.2699016805467821 T(ph)RKSINYSK ddPTM_A549_PD325901_60min_R1 1 TRKSINYSK 9 2 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-4 A0A087WSW7 HELLS Lymphoid-specific helicase 1 T(0.929)RKS(0.071)INYSK 63.537 0.0023083 2972300.0 1516.3 2339.6 1509.8 3071.9 2125.7 2256.6 2260.1 1960.9 3535.5 2357.8 2260.8 True False 1670.2336597589363 2536.766302826913 1612.2641071649434 3261.644286208914 1976.3981652668933 2238.222997773345 2346.1093422741737 1921.7883112037093 3386.9152300324354 2208.928105615335 1982.7359323919918 0.8423883546327575 1.2794272103428992 0.8131512022480434 1.6450220288659594 0.9968035243516001 1.1288558204889803 1.183268686437636 0.9692608480067466 1.708202880020653 1.1140808362465409 1.0 10.953276831922851 T(ph)RKSPSSDSWTCADTSTER ddPTM_A549_MK2206_60min_R1 2 TRKSPSSDSWTCADTSTER 19 2 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 T(0.56)RKS(0.433)PS(0.005)S(0.001)DSWTCADTSTER;T(0.546)RKS(0.45)PS(0.003)S(0.001)DSWTCADTSTER 67.413 0.0030381999999999996 13677200.0 4199.6 4092.4 3444.1 2833.2400000000002 4364.4 3543.8 3378.3 3204.8999999999996 5621.7 4997.200000000001 5383.5 True False 4908.389809637789 4300.685679946314 3932.525168543572 3527.383927188979 3722.4025414857188 3918.8025638159443 3992.0933805764985 3659.204389594612 4348.39392601019 3868.3290492938722 4046.6283729586276 1.2129578891992738 1.0627824656905513 0.9718028951762548 0.8716846722967024 0.9198775371517853 0.9684117746030566 0.9865233504646593 0.9042600536404689 1.0745720944053312 0.95593879466268 1.0 11.98250464809798 -5.340568323943172 2.8387490955154036 0.9979141163309442 1.2330188570159677 0.5525799040872633 0.060624506543509066 0.25182350692668337 3.0423779187453603 0.01009635045973611 0.12341151215643426 4.564904287057425e-06 5.340568323943172 0.23510474068502352 T(ph)RKSPSSDSWTCADTSTER ddPTM_A549_PD325901_60min_R1 1 TRKSPSSDSWTCADTSTER 19 2 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 T(0.532)RKS(0.409)PS(0.018)S(0.018)DS(0.018)WT(0.005)CADTSTER 68.55199999999999 0.0026468000000000004 11342000.0 2025.9 2155.1 2062.3 1976.8 1716.6 1953.3 1923.5 2421.4 2137.2 2899.8 2968.5 True False 2231.567876611246 2336.717840324107 2202.260079617342 2098.9024463614646 1596.0319379485097 1937.3929724145512 1996.6998450795875 2373.103277448449 2047.3809163132 2716.706133117036 2603.393318871915 0.8571766165468282 0.8975661969266471 0.8459190794004229 0.8062179583647956 0.6130583213757695 0.744179897202029 0.7669605013601187 0.9115423552199734 0.786427813835044 1.0435250461095218 1.0 11.346177574244942 -10.766923157217995 0.6473121198132326 1.026539809661889 0.7978391429255605 0.5277434625630882 0.07909510029099687 0.7968262831679025 0.47994199828959455 0.10491751583594139 0.017181179601114843 1.710317906914992e-11 10.766923157217995 -0.2287006667363285 T(ph)RLSPPR ddPTM_A549_MK2206_60min_R1 1 TRLSPPR 7 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.835)RLS(0.165)PPR 53.493 0.017725 14961000.0 973.71 1088.1 1092.9 918.48 1935.4 1012.5 846.4 921.47 1448.9 1396.9 1491.7 True False 1138.0484430761046 1143.4796423491316 1247.8896538141373 1143.5076412321341 1650.705223808876 1119.6420779568948 1000.179924020941 1052.091194383521 1120.726463417857 1081.3393198108163 1121.2697211744003 1.01496403727386 1.0198078310287992 1.1129254899589345 1.0198328017227132 1.4721749750630504 0.9985483927847435 0.8920065396694814 0.9383034023977542 0.9995154977020388 0.9643882282652193 1.0 10.13091764451369 -7.483763217907988 24.999684550965835 0.9850230751993585 1.1271202206392208 0.29555451140360256 0.12305385437185663 597.968387971637 382176.4826564688 0.017922060921522973 0.028647222565508713 3.282742230210377e-08 7.483763217907988 0.1420971454398623 T(ph)RLSPPR ddPTM_A549_PD325901_60min_R1 2 TRLSPPR 7 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.591)RLS(0.409)PPR;T(0.542)RLS(0.458)PPR 67.89699999999999 0.0091774 19145900.0 3195.7000000000003 3020.3 3214.26 3399.0 3941.3999999999996 3206.4 2559.29 3492.3 3012.0 4090.8999999999996 4111.6 True False 3520.125111450001 3274.8312807437724 3432.399012515557 3608.9485103109123 3664.5696610918444 3180.2881414785325 2656.6851814472257 3422.6433368436496 2885.416114512146 3832.599875842639 3605.899265579848 0.9762128257578893 0.9081871232520862 0.9518843316782475 1.0008456267095898 1.0162706695863735 0.8819681048319926 0.7367607871929879 0.9491788551928031 0.8001932117335939 1.062869368655626 1.0 11.816143378859314 -7.2818806668941685 23.870542051469794 0.8915237609397572 0.9678399363977513 0.1114101601800418 0.08746570217413153 690.2145022539372 806003.9089106201 0.013431851044466623 0.021489786870730342 5.22539749941522e-08 7.2818806668941685 0.07631617545799418 T(ph)RLSPPRASYDDPYK ddPTM_A549_MK2206_60min_R1 2 TRLSPPRASYDDPYK 15 2 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.444)RLS(0.444)PPRAS(0.099)Y(0.012)DDPYK;T(0.408)RLS(0.408)PPRAS(0.12)Y(0.063)DDPY(0.001)K 46.159 0.011872 6648500.0 1376.93 1697.98 1780.1100000000001 1555.23 2088.6 1134.74 1345.52 1513.8600000000001 1925.37 2085.22 2562.5 True False 1609.32212129359 1784.3999293410322 2032.556365313463 1936.261419816927 1781.3697067516891 1254.8174336205502 1589.9835673070154 1728.454291001811 1489.2767691840975 1614.167353751814 1926.1605285978417 0.8355077873312585 0.9264025001280631 1.0552372635281198 1.005244054723953 0.9248293069573211 0.6514604649976921 0.8254678380645937 0.8973573413738511 0.773184138638862 0.8380232746887692 1.0 10.911512228840916 -5.232604504267745 20.317849413468114 0.892732913453537 0.8355067987566532 0.019068286383808752 0.10986764648954252 3143.674344347165 2214651.146247987 0.017067377960693592 1.4371587853343673 5.853228731484482e-06 5.232604504267745 -0.05722611469688377 T(ph)RLSPPRASYDDPYKK ddPTM_A549_MK2206_60min_R1 3 TRLSPPRASYDDPYKK 16 3 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.537)RLS(0.393)PPRAS(0.045)Y(0.023)DDPY(0.003)KK;T(0.494)RLS(0.494)PPRAS(0.007)Y(0.005)DDPYKK;T(0.544)RLS(0.451)PPRAS(0.004)YDDPYKK 57.745 0.0036191 20792300.0 4344.3 6697.1 7571.5 5618.4 8334.0 5866.3 5444.5 4067.8 9835.4 9241.599999999999 9701.0 True False 5077.511632062444 7037.953784373095 8645.252551792239 6994.90825221956 7108.079639983039 6487.0679722652185 6433.695175250488 4644.423107115032 7607.69760390641 7153.916141430049 7291.973966020549 0.6963151069549685 0.9651644146247439 1.1855846704990658 0.9592612761393187 0.974781269530798 0.8896175442334181 0.8822981548248109 0.6369226122799275 1.0432974170446965 0.9810671533889413 1.0 12.832093695304069 T(ph)RLSPPRASYDDPYKK ddPTM_A549_PD325901_60min_R1 3 TRLSPPRASYDDPYKK 16 3 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.497)RLS(0.497)PPRAS(0.004)Y(0.001)DDPYKK;T(0.491)RLS(0.491)PPRAS(0.015)Y(0.002)DDPY(0.001)KK;T(0.564)RLS(0.428)PPRAS(0.009)YDDPYKK 81.35600000000001 5.9287e-05 34563600.0 2832.7799999999997 3234.29 4586.7 4903.4 3703.4799999999996 8293.0 5900.8 6358.0 5491.6 4117.48 5141.2 True False 3120.361740217582 3506.8549690417435 4897.981044067718 5206.271881570619 3443.360341112401 8225.464557535386 6125.358173041655 6231.184702245491 5260.807149553423 3857.5016101064684 4508.864992751995 0.6920503819106508 0.7777689007497489 1.0863002223267337 1.1546745999136605 0.7636867252950812 1.824287169999064 1.358514433873752 1.3819852029861457 1.1667697209852539 0.8555371731705 1.0 12.138548597209448 -5.729792517287818 1.9490016818935423 1.1585569638005078 0.6698598440375153 0.2862900456852885 0.2709591653719063 0.3951595452040159 2.6800018715944223 0.03776911296449324 0.24813335035211104 1.8629769549984624e-06 5.729792517287818 -0.48869711976299246 T(ph)RNSGIWESPELDR ddPTM_A549_MK2206_60min_R1 2 TRNSGIWESPELDR 14 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.5)RNS(0.5)GIWESPELDR;T(0.5)RNS(0.5)GIWESPELDR 83.666 0.00011694 8850700.0 1011.78 1349.97 1013.4100000000001 672.89 2060.17 1367.03 1331.22 1287.26 2211.9 1849.1799999999998 2283.7 True False 1182.5437283539673 1418.6777068119259 1157.1267765319656 837.7480802071801 1757.1217220906976 1511.6882072389271 1573.0854424092122 1469.7330470684144 1710.9081816784858 1431.4489536887143 1716.5942630863972 0.6888894794671985 0.8264490551548133 0.674082863618266 0.48802917394173756 1.0236092243087385 0.8806322144645563 0.9163991027098276 0.8561912844948393 0.9966875798607832 0.8338889302327049 1.0 10.745333366631499 -6.779978442009689 24.996996383902445 0.9735403014170649 0.6809202289178631 0.5959088564848416 0.09881531325374367 98.97784155936323 133455.82753300958 0.013385200158985323 0.0253277934358064 1.6596692898945206e-07 6.779978442009689 -0.29262007249920186 T(ph)RNSGIWESPELDRNLAEDASSTEAAGGYK ddPTM_A549_MK2206_60min_R1 2 TRNSGIWESPELDRNLAEDASSTEAAGGYK 30 2 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.499)RNS(0.499)GIWES(0.002)PELDRNLAEDASSTEAAGGYK;T(0.565)RNS(0.434)GIWES(0.001)PELDRNLAEDASSTEAAGGYK 174.66 6.358099999999999e-58 44215000.0 2751.93 3059.8999999999996 3052.3 2640.2 3787.5 3076.1 2767.8999999999996 2797.8 4698.5 4285.200000000001 5378.1 True False 3216.388505771148 3215.63584011038 3485.1620370911246 3287.0491185230812 3230.36376727091 3401.6108602500763 3270.7916017220755 3194.3967179031506 3634.297251962731 3317.170343799346 4042.5693419910444 0.7956297675247826 0.7954435825525299 0.8621155859690496 0.8131089019005288 0.7990867920845343 0.8414477458473765 0.8090873217059393 0.7901897154174349 0.8990067812102807 0.8205599120695787 1.0 11.981056805049612 -9.441016672097833 0.748237876238831 0.9867933346831894 0.8117628934207594 0.12191857299040054 0.05630867403395982 0.14063552621344425 0.170673445997728 0.010021101206413694 0.006651056568226667 3.622290925647021e-10 9.441016672097833 -0.17503044126243006 T(ph)RNSGIWESPELDRNLAEDASSTEAAGGYK ddPTM_A549_PD325901_60min_R1 1 TRNSGIWESPELDRNLAEDASSTEAAGGYK 30 2 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.613)RNS(0.387)GIWESPELDRNLAEDASSTEAAGGYK 260.93 1.0189999999999997e-139 38188000.0 3511.8 4148.3 2976.0 4409.7 3587.3 4465.4 3646.2 3670.1 5272.2 4343.9 4866.2 True False 3868.3153507494817 4497.891799460119 3177.9692561417864 4682.07715384467 3335.34042351316 4429.035262898653 3784.9581362771987 3596.89697636225 5050.627768569369 4069.6254126653903 4267.6882493833655 0.9064193832125417 1.0539410417595556 0.7446582483153422 1.0970991506985495 0.781533286550413 1.037806654115047 0.8868872127255509 0.8428209293127169 1.183457523941476 0.9535901347183471 1.0 12.059239077156308 -8.757672098651485 24.999985753121223 1.0866327197255292 0.9218474446060534 0.16205404448444483 0.11869693560072508 85.30196416631158 566069.914235643 0.01898295245381518 0.021125522436803965 1.7471407826178562e-09 8.757672098651485 -0.16478527511947583 T(ph)RPGSPQALGGPHGPAPATAK ddPTM_A549_PD325901_60min_R1 2 TRPGSPQALGGPHGPAPATAK 21 1 Q8WXD9 Q8WXD9 CASKIN1 Caskin-1 1 T(0.5)RPGS(0.5)PQALGGPHGPAPATAK;T(0.553)RPGS(0.447)PQALGGPHGPAPATAK 73.805 0.00017444 10649700.0 2925.3999999999996 3246.0 3412.2 3695.5 3525.3 3571.6 2690.5 3249.2 3710.0 3252.8 3957.2 True False 3222.384454434344 3519.551811837992 3643.7724112254705 3923.7626419105586 3277.6950896247736 3542.514073760208 2792.8884497980907 3184.392157051912 3554.0816018725322 3047.417652873679 3470.489486757603 0.928510075230034 1.0141370043815423 1.0499303989045539 1.1306078456317232 0.9444474913788162 1.0207534375993443 0.8047534679055953 0.9175628306043407 1.0240865490109947 0.8780944775950927 1.0 11.76092344323355 T(ph)RS(ph)VEDDEEGHLICQSGDVLSAR ddPTM_A549_PD325901_60min_R1 3 TRSVEDDEEGHLICQSGDVLSAR 23 1 F8WBF5;P49759;P49759-3 F8WBF5 CLK1 Dual specificity protein kinase CLK1 2 T(1)RS(1)VEDDEEGHLICQSGDVLSAR;T(1)RS(1)VEDDEEGHLICQSGDVLSAR;T(1)RS(1)VEDDEEGHLICQSGDVLSAR 72.015 0.00011394 8651000.0 389.07 768.38 698.84 735.59 724.63 631.3 451.52 1091.42 418.65000000000003 592.79 720.6 True False 428.5680999818042 833.1340792298449 746.2674848663062 781.0257236539002 673.734488637789 626.1589021068477 468.7028406812244 1069.650771897574 401.05559639459176 555.3611382338258 631.9707682597616 0.6781454483439779 1.3183111008821191 1.1808576002989504 1.2358573574606728 1.066084892649435 0.9908035838921507 0.7416527222799829 1.6925636843030547 0.6346109923706854 0.8787766240566897 1.0 9.303714018015702 T(ph)RSEGGGTGESSQGGTSK ddPTM_A549_MK2206_60min_R1 1 TRSEGGGTGESSQGGTSK 18 1 Q9H6E5;F5H0R1 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase 1 T(0.46)RS(0.46)EGGGT(0.076)GES(0.004)S(0.001)QGGTSK 65.107 0.00091503 8070500.0 858.5 652.86 583.47 679.4 870.85 492.58 538.7 739.57 824.18 1237.1 1512.1 True False 1003.3938116901709 686.0877854094792 666.2148195726365 845.8530304994249 742.7491186080197 544.7044886518586 636.5748169542552 844.4063123381344 637.5045459450131 957.6382507967362 1136.6038381630428 0.8827999501671898 0.6036296573820489 0.5861451432799665 0.7441933610451961 0.6534810931207451 0.4792386497059516 0.5600674532148995 0.7429205181137234 0.5608854418223113 0.8425435658781979 1.0 10.150513776965338 -10.814915163490973 0.9253831926924787 1.0129588861068897 0.6364750418464727 0.4403674030562631 0.11488698990393546 0.32625307780401125 0.46722974391021327 0.0862237162827638 0.01862877049528641 1.531386578544619e-11 10.814915163490973 -0.3764838442604169 T(ph)RSEGGGTGESSQGGTSK ddPTM_A549_PD325901_60min_R1 1 TRSEGGGTGESSQGGTSK 18 1 Q9H6E5;F5H0R1 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase 1 T(0.436)RS(0.436)EGGGT(0.124)GES(0.002)S(0.001)QGGTSK 74.579 0.00020812 6867800.0 642.16 989.82 595.98 545.04 1067.3 737.13 794.01 581.92 767.64 1074.9 1275.1 True False 707.3516104667933 1073.235605173592 636.4267867188785 578.7058829243485 992.3365299851127 731.1270576746724 824.2264850489433 570.3131490925913 735.3787603400078 1007.0306305564185 1118.2707835248711 0.632540544640869 0.9597278414005193 0.5691168866209799 0.5175006728694327 0.8873848307627206 0.653801448134151 0.7370544748123717 0.5099955730712401 0.6576034813518424 0.9005248508614205 1.0 10.127053856337598 -10.631765160499205 0.90870850480597 1.000047741257085 0.6834591646067666 0.36000830010813334 0.13635339543452882 0.42837427374163456 0.6309872726112999 0.08809550993049862 0.02383334087190981 2.3347201927823227e-11 10.631765160499205 -0.31658857665031837 T(ph)RSEITFGQVK ddPTM_A549_MK2206_60min_R1 3 TRSEITFGQVK 11 1 H7C1A4;F5H5A3;Q8IVH8-3;Q8IVH8-2;Q8IVH8 H7C1A4 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 1 T(0.5)RS(0.5)EITFGQVK;T(0.63)RS(0.368)EIT(0.002)FGQVK;T(0.499)RS(0.499)EIT(0.001)FGQVK 114.7 8.8336e-06 106670800.0 6220.7 7626.200000000001 7753.200000000001 6337.1 9095.9 6318.799999999999 7130.299999999999 7358.6 9688.5 9188.0 10040.699999999999 True False 7270.602078486944 8014.341005866135 8852.72034399466 7889.689784483227 7757.905159265874 6987.451221920024 8425.78321390184 8401.704084767363 7494.070219355308 7112.424418656869 7547.3170807775 0.9633359776290134 1.0618794626077275 1.172962557322778 1.0453634980538618 1.0279023759349832 0.9258192212059811 1.1163944914096338 1.1132040690546747 0.9929449285286014 0.9423778466617928 1.0 12.88174817120018 -8.826989856341903 24.989571302080652 0.9966683067069263 1.0543640704352224 0.1835624320036625 0.0674169945215711 84.72222295282582 32297.42476500958 0.011454648330024344 0.012194401523935496 1.4893958645816138e-09 8.826989856341903 0.0576957637282961 T(ph)RSEITFGQVK ddPTM_A549_PD325901_60min_R1 4 TRSEITFGQVK 11 1 H7C1A4;F5H5A3;Q8IVH8-3;Q8IVH8-2;Q8IVH8 H7C1A4 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 1 T(0.543)RS(0.456)EITFGQVK;T(0.674)RS(0.326)EITFGQVK;T(0.498)RS(0.498)EIT(0.005)FGQVK;T(0.5)RS(0.5)EITFGQVK 127.32 4.8488e-08 127167000.0 12130.699999999999 12392.5 12895.6 12615.220000000001 14738.699999999999 13494.7 13900.400000000001 13942.200000000003 13433.7 14783.5 13894.599999999999 True False 13362.199733850654 13436.859466482532 13770.772963542357 13394.433488156654 13703.504557754697 13384.803637353525 14429.387328590738 13664.111883555695 12869.128305950146 13850.067287032105 12185.652285126398 1.096551864536651 1.1026787201932011 1.130080905094488 1.099197086437931 1.1245606092405052 1.098406825024114 1.1841292522520936 1.121327899716446 1.056088587203328 1.1365880925338123 1.0 13.572895858623012 -9.112815604750494 1.4972735895492795 1.0175856674446855 1.1201589791287665 0.03189600553445504 0.044108345349021055 0.13165655681914806 0.6061751304959959 0.005917072302139416 0.005535341038019728 7.712308531905248e-10 9.112815604750494 0.10257331168408101 T(ph)RSFGHFPGPEFLDVEK ddPTM_A549_MK2206_60min_R1 5 TRSFGHFPGPEFLDVEK 17 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 T(0.5)RS(0.5)FGHFPGPEFLDVEK;T(0.5)RS(0.5)FGHFPGPEFLDVEK;T(0.539)RS(0.461)FGHFPGPEFLDVEK;T(0.5)RS(0.5)FGHFPGPEFLDVEK;T(0.565)RS(0.435)FGHFPGPEFLDVEK 83.60600000000001 5.5368e-05 18364100.0 4098.9400000000005 4137.01 4084.14 4274.8 6180.65 3989.2259999999997 3832.71 4526.95 6542.570000000001 5639.030000000001 6919.15 True False 4790.740862538509 4347.566138401599 4663.332464752923 5322.126191903063 5271.484572457547 4411.363247486093 4529.0637955981865 5168.659025702931 5060.688341337405 4365.169206523579 5200.934096174731 0.921130853409983 0.8359202516331093 0.8966336389808877 1.02330198642922 1.0135649625583039 0.848186722983211 0.8708173785415387 0.9937943704198178 0.9730345064475099 0.8393048490528164 1.0 12.344555041549423 -2.0000000640816813 0.08905793314556004 1.053032925238533 0.5965530722722491 0.0 0.07667723816065498 146.756396232177 0.913150677109453 0.6076549575239784 8.208598521440068 0.009999998524464869 2.0000000640816813 -0.456479852966284 T(ph)RSFGHFPGPEFLDVEK ddPTM_A549_PD325901_60min_R1 4 TRSFGHFPGPEFLDVEK 17 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 T(0.562)RS(0.438)FGHFPGPEFLDVEK;T(0.5)RS(0.5)FGHFPGPEFLDVEK;T(0.562)RS(0.438)FGHFPGPEFLDVEK;T(0.568)RS(0.432)FGHFPGPEFLDVEK 97.509 9.4381e-07 45191000.0 4031.53 4525.76 4746.6 4951.8 5421.4 5228.1 4893.719999999999 5283.3 5439.6 5728.7 7084.800000000001 True False 4440.807957744477 4907.161678356099 5068.732819624535 5257.661439646244 5040.6195668146665 5185.524086971033 5079.953192546333 5177.9204368313285 5210.992528718549 5366.988904333943 6213.414514247519 0.7147129726435586 0.7897689212757094 0.8157725205684895 0.8461790900301744 0.8112479145333691 0.8345691527710719 0.8175783509852547 0.833345405325562 0.8386680973512405 0.8637744821349516 1.0 12.601170588370465 -14.999999999999998 0.159653326227436 1.7341522743965558 0.759333754071134 0.40676760986720295 0.04976005813808249 13.588910155928623 0.14002546196605734 3.1086726950313506 0.044977423076900516 1.000000000000004e-15 14.999999999999998 -0.9748185203254218 T(ph)RSHRDSEDI ddPTM_A549_PD325901_60min_R1 1 TRSHRDSEDI 10 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.585)RS(0.38)HRDS(0.036)EDI 50.46 0.050735 5263200.0 1079.4 616.69 967.65 1096.4 1393.1 1662.6 1114.0 1325.9 1565.5 1389.0 1455.9 True False 1188.979893387719 668.6606305737429 1033.32054795215 1164.1221378949356 1295.253461934096 1649.060336833273 1156.3938796041903 1299.4538843515722 1499.7074791728974 1301.2983029517763 1276.8335297105016 0.9311941343342528 0.5236866161600168 0.809283688051673 0.9117258521233217 1.0144262598020675 1.2915233649974456 0.9056731771967026 1.0177159779366065 1.1745520808127026 1.01916050344231 1.0 10.318354727074267 -6.475899144087455 1.9841702214495363 1.0784587998210973 0.7240342214003422 0.5151106426013812 0.1305085991324397 0.18046453869489903 1.3915433723292483 0.018654745175787555 0.051807414091769775 3.342726589256064e-07 6.475899144087455 -0.35442457842075503 T(ph)RSLPDR ddPTM_A549_MK2206_60min_R1 1 TRSLPDR 7 1 Q08495-2;Q08495;Q08495-3;Q08495-4 Q08495-2 DMTN Dematin 1 T(0.65)RS(0.35)LPDR 81.33800000000001 0.0061223 16030000.0 930.12 1233.6 797.43 736.13 1157.5 786.77 991.09 953.91 1298.7 1553.4 1492.3 True False 1087.1015167492858 1296.3849708683833 910.5175648650444 916.4818830461317 987.2332833309786 870.0254791843419 1171.158224123245 1089.1296637268556 1004.546523597744 1202.485861116846 1121.7207246152425 0.96913740906603 1.155710991533166 0.8117150239667346 0.8170321390473471 0.8801061277258705 0.7756168358953752 1.0440729126449544 0.9709454767365863 0.895540664938958 1.0720011093040174 1.0 10.131497816789963 -10.943899780367383 0.990323886842535 1.004076601407005 0.921420607383077 0.11990201502137587 0.10737915767418173 1.5442231088830858 2.458777233492764 0.09716197134816118 0.018531390345415993 1.1378898398033158e-11 10.943899780367383 -0.08265599402392809 T(ph)RSLPITIEMLK ddPTM_A549_MK2206_60min_R1 1 TRSLPITIEMLK 12 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 T(0.498)RS(0.498)LPIT(0.003)IEMLK 71.344 0.0010093 1332000.0 1139.4 991.75 1173.9 1285.8 1275.3 912.01 790.46 868.61 947.5 1109.6 1202.9 True False 1331.7028643445321 1042.2258388932553 1340.3766718020092 1600.8210577217546 1087.7050593796944 1008.518292856758 934.0763501200307 991.7381275065613 732.8927628465868 858.940589349332 904.1867316489149 1.4728184098830779 1.1526665924334083 1.4824113481046544 1.770454046369854 1.2029650749199863 1.1153871844785639 1.0330569089601744 1.0968288880970238 0.8105546533624213 0.9499592941194015 1.0 9.820476936977338 -7.399821746417315 1.4825745972143334 0.9274160887783984 1.4425838285750974 0.64595166607476 0.15850281446869616 0.18114699281741425 0.7846585974429919 0.02706108465577558 0.04994417089075489 3.98270604807847e-08 7.399821746417315 0.5151677397966989 T(ph)RSLSDFTGPPQLQALK ddPTM_A549_PD325901_60min_R1 2 TRSLSDFTGPPQLQALK 17 1 O95425-4;O95425;O95425-3 O95425-4;O95425-3 SVIL Supervillin 1 T(0.548)RS(0.439)LS(0.012)DFTGPPQLQALK;T(0.549)RS(0.358)LS(0.092)DFTGPPQLQALK 143.95 1.1463e-16 5807300.0 3607.3 4113.9 4476.2 5194.9 5340.8 5659.6 4851.0 5143.8 6314.8 5950.9 5793.700000000001 True False 3973.510440446095 4460.5927907333025 4779.981849577239 5515.77717452609 4965.6806327597615 5613.510094034397 5035.607459569055 5041.202873766963 6049.410916308537 5575.159158413055 5081.111629290291 0.7820159701945181 0.87787734578001 0.9407354528530378 1.0855453642722885 0.9772823340732917 1.1047799189600702 0.9910444459714436 0.99214566448545 1.1905683948048775 1.0972321738170059 1.0 12.310928444380167 -5.023565566861785 0.6062021503544404 1.0786807027640946 0.4862864356213355 0.6610491280950515 0.06341980421262804 2.2400272392150127 0.45663264432664324 0.013898519200426332 0.9849800779973146 9.471841742089933e-06 5.023565566861785 -0.5923942671427591 T(ph)RSLSSLR ddPTM_A549_MK2206_60min_R1 2 TRSLSSLR 8 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.897)RS(0.103)LSSLR;T(0.754)RS(0.245)LSSLR 90.913 0.0010388 105169000.0 1627.74 2335.79 1892.2199999999998 1537.29 2676.5 2142.9 1666.25 1844.67 3043.5 3401.7 3181.0 True False 1902.46271757782 2454.671734034259 2160.5652490988973 1913.9261190115697 2282.790395538111 2369.660255658104 1968.986056710651 2106.1576215649475 2354.1521094708046 2633.253607416746 2391.069908866238 0.795653322608163 1.026599734676172 0.9035976911789091 0.8004475786820832 0.9547150365923557 0.9910459944609958 0.8234749010932413 0.8808431797644988 0.9845601338302405 1.1012867493553724 1.0 11.223440596100259 -8.805409906980008 7.196227890984216 0.9929461408285553 0.9009900339702137 0.33809856761688006 0.07760391105407811 0.200978489777703 26.12036484138693 0.01172346340360366 0.012506751058879242 1.565272996491465e-09 8.805409906980008 -0.09195610685834155 T(ph)RSLSSLR ddPTM_A549_PD325901_60min_R1 3 TRSLSSLR 8 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.8)RS(0.2)LSSLR;T(0.85)RS(0.15)LSSLR;T(0.607)RS(0.393)LSSLR 99.28299999999999 0.00095576 149847100.0 4398.2 4276.73 4620.13 4894.43 5579.209999999999 4929.709999999999 5845.139999999999 5834.0199999999995 5195.7 5318.09 5132.210000000001 True False 4844.702026216287 4637.145046285238 4933.679804898644 5196.747825042969 5187.345536829611 4889.564076200141 6067.580001283333 5717.655894399847 4977.342797533452 4982.304889809082 4500.98070575969 1.0763658728900467 1.030252149348542 1.0961344043499786 1.1545812267964046 1.1524922846684529 1.0863330451390738 1.3480573230449402 1.2703133535061006 1.1058351774679203 1.1069376243789413 1.0 12.136023665034413 -9.80280223214533 1.2133818609597862 1.0197340992430037 1.1480703998868949 0.11430837191077026 0.09073184005515712 0.4218012503065277 1.2592096207425827 0.02731379067206542 0.01788091336114604 1.574699783777385e-10 9.80280223214533 0.12833630064389112 T(ph)RSLVGGLLQSK ddPTM_A549_MK2206_60min_R1 2 TRSLVGGLLQSK 12 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.623)RS(0.377)LVGGLLQSK;T(0.5)RS(0.5)LVGGLLQSK 103.66 7.5741e-05 15254200.0 1602.9499999999998 1725.21 1711.98 1775.8 1914.21 1497.8 1451.6 1305.0 2615.32 2589.65 2353.3 True False 1873.4887716351286 1813.0158200323 1954.76450685033 2210.8710797186923 1632.6322447386547 1656.2962018408273 1715.336930185253 1489.9877463948858 2022.9541958078482 2004.6462664099654 1768.9106622241186 1.059120062784584 1.0249335134611752 1.1050668349709252 1.249848919412855 0.9229591293694188 0.9363368298986355 0.9697137152356212 0.8423193879794175 1.1436158077448135 1.1332659750546403 1.0 10.788645472079459 -4.820666361838649 12.91269398670662 1.043165235805697 4.36190192925627 0.0 0.11222949052271819 1119125.9241595345 218733.73610800682 0.01572216533728402 109601331.39538726 1.5112406891507101e-05 4.820666361838649 3.318736693450573 T(ph)RSLVGGLLQSK ddPTM_A549_PD325901_60min_R1 1 TRSLVGGLLQSK 12 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.673)RS(0.327)LVGGLLQSK 140.93 4.5678e-12 12007000.0 1299.8 1271.2 1311.8 1276.2 1705.2 1424.1 1398.6 1559.8 1519.7 1405.9 1673.0 True False 1431.754739137813 1378.3284852767874 1400.8266364942192 1355.0279755395088 1585.4326346206456 1412.50260175885 1451.8244883432853 1528.6885653605716 1455.832293899107 1317.1312340676043 1467.231606020791 0.9758205407125919 0.9394075752054486 0.954741317421136 0.9235269810022806 1.0805605796077566 0.9626991375885304 0.9894991918015652 1.0418863382492523 0.9922307343469791 0.8976982425015592 1.0 10.518880906514628 T(ph)RSNPEGAEDR ddPTM_A549_MK2206_60min_R1 2 TRSNPEGAEDR 11 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 T(0.5)RS(0.5)NPEGAEDR;T(0.844)RS(0.156)NPEGAEDR 130.21 3.7894e-08 399637000.0 2529.04 2882.12 1955.33 1951.6399999999999 3297.3 2937.1 2868.3999999999996 2858.5 3982.2999999999997 4888.8 4862.9 True False 2955.8801229084556 3028.8075974701565 2232.625196076856 2429.7918876124486 2812.2715379068977 3247.901972510809 3389.5511508290056 3263.7011287891064 3080.315408426345 3784.4166845809386 3655.307720787687 0.8086542498456161 0.8286053675441243 0.6107899434512575 0.6647297774122419 0.7693665630156242 0.8885440626626409 0.9272957052432749 0.892866313341687 0.842696605516584 1.0353209561698489 1.0 11.83577714872409 -7.247768292389732 2.969345643596481 0.9205244853672059 0.7261471815704176 0.631218683844435 0.0745583317910068 0.15248681517635546 2.718440669843998 0.01226544835812444 0.021528486692988336 5.6523846407227244e-08 7.247768292389732 -0.1943773037967883 T(ph)RSNPEGAEDR ddPTM_A549_PD325901_60min_R1 1 TRSNPEGAEDR 11 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 T(0.627)RS(0.373)NPEGAEDR 90.45299999999999 0.00011840000000000002 62010000.0 2881.0 3190.2 3019.3 2650.7 2859.7 2299.6 2069.9 2552.7 2802.4 2751.8 3483.5 True False 3173.476999119895 3459.049350007873 3224.2078545258396 2814.42771882352 2658.844537429426 2280.872820029949 2148.671177192742 2501.7843959455895 2684.624873608513 2578.050878374875 3055.0515837258954 1.0387638022300003 1.1322392618291792 1.0553693664948347 0.9212373806765927 0.8703108489535679 0.7465906082175642 0.7033174787092318 0.8189008687357254 0.8787494417146255 0.8438649259174612 1.0 11.576981024430236 -6.2537245162190604 3.348104934774311 0.8943592178709737 1.0871605580296222 0.5381667017096923 0.08692627402044358 0.206789952912824 4.867781467813813 0.015610411523990652 0.04282715768766235 5.575392978176352e-07 6.2537245162190604 0.19280134015864847 T(ph)RSPFAK ddPTM_A549_MK2206_60min_R1 1 TRSPFAK 7 1 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 T(0.619)RS(0.381)PFAK 49.715 0.021362 11616000.0 2930.9 3209.1 2932.0 2543.4 3823.2 3250.7 3026.5 3070.6 4395.2 4094.4 4334.0 True False 3425.56426637475 3372.4294828256575 3347.8016881535796 3166.533114177563 3260.8123445624146 3594.6869163599777 3576.3758743494573 3505.8669533181105 3399.6942176921575 3169.4721963157003 3257.7481876850916 1.0515129067753104 1.0352026272546426 1.0276428671831996 0.9720005757804305 1.0009405751153224 1.1034268793237545 1.0978061127833143 1.0761626594010412 1.0435718237964644 0.9729027578917575 1.0 11.669659377654419 -5.296671305394131 3.515560350062964 1.0311567634151195 1.0532159477382588 0.014080268247266048 0.043312325750630584 1.2265025839291173 26.338753018007626 0.006106349659349386 0.06740563952953402 5.050433936797801e-06 5.296671305394131 0.022059184323139247 T(ph)RSPVTFLSDLR ddPTM_A549_MK2206_60min_R1 1 TRSPVTFLSDLR 12 1 A5YKK6-2;A5YKK6 A5YKK6-2 CNOT1 CCR4-NOT transcription complex subunit 1 1 T(0.5)RS(0.5)PVTFLSDLR 57.678999999999995 0.0054357 673020.0 125.41 156.51 0.0 162.06 149.4 131.31 0.0 0.0 222.58 162.89 150.0 True False 146.5761420198768 164.47569049174018 0.0 201.76470727514985 127.4234579089833 145.2051370434764 0.0 0.0 172.1659853872225 126.09303586798175 112.75086021060532 1.3000002106067292 1.4587533095935497 0.0 1.7894737733998405 1.1301329113673393 1.2878406140072929 0.0 0.0 1.5269593958364194 1.1183332493646152 1.0 6.816994630056626 T(ph)RSQEQEVLER ddPTM_A549_MK2206_60min_R1 1 TRSQEQEVLER 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.621)RS(0.379)QEQEVLER 82.529 0.00027258 10418000.0 571.85 445.6 507.66 333.66 619.46 410.54 479.02 394.53 751.75 480.89 586.58 True False 668.3642996098122 468.2791366885149 579.6538216262102 415.40671497856647 528.3382545936997 453.9830703056036 566.0517334646871 450.45583569745133 581.4798252980706 372.25661500738994 440.9159972155796 1.5158540489131425 1.0620597566106373 1.3146581781717408 0.942144802188838 1.1982741790504288 1.0296361964014542 1.2838085645323596 1.0216364081641778 1.3187995649288369 0.8442801290001287 1.0 8.784360011216714 -11.102907841859762 1.4468526714143854 1.0001731339075968 1.1929612445818067 0.24521376010736629 0.16696456424482617 0.5771657691491253 2.1632180732234687 0.10644146783742583 0.023266451898302544 7.890275330439197e-12 11.102907841859762 0.19278811067420998 T(ph)RSQEQEVLER ddPTM_A549_PD325901_60min_R1 1 TRSQEQEVLER 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.678)RS(0.322)QEQEVLER 155.57 1.4647e-13 11090000.0 611.41 727.91 792.69 885.02 762.91 637.39 691.74 540.45 700.2 774.8 771.54 True False 673.4798931037468 789.2535303003667 846.4867102322019 939.6856753737463 709.3258334966199 632.1993071659806 718.0645442346527 529.6703007751767 670.7730290110903 725.8789957718046 676.6454711950271 0.9953216592350946 1.1664210637610002 1.251004767293007 1.388741542471514 1.0482976147669707 0.9343139562427724 1.0612123701448488 0.7827885108574261 0.9913212421660558 1.0727611824399357 1.0 9.40225632059166 -6.985503214487087 24.67301318171838 0.9801067805645233 1.2036833240082034 0.4717104964121628 0.11200846725216675 131.7333158888859 224203.73201844876 0.015268868258244311 0.028846763628164813 1.0339434480871554e-07 6.985503214487087 0.22357654344368016 T(ph)RSTGQLELGR ddPTM_A549_PD325901_60min_R1 1 TRSTGQLELGR 11 1 E7EUN2 E7EUN2 AGAP1 1 T(0.873)RS(0.125)T(0.002)GQLELGR 116.79 7.3604e-06 7771000.0 1188.4 1173.8 1299.4 1373.7 1763.7 1354.8 1138.6 1330.2 1483.7 1469.6 1480.2 True False 1309.0454931461584 1272.7202454514577 1387.585097926962 1458.550329100942 1639.8237964346893 1343.766957982509 1181.9300460658264 1303.6681174782875 1421.3452487057339 1376.8092051964945 1298.1447837608932 1.0083971445416777 0.9804147128829672 1.0688985660805481 1.123565219647791 1.2632056277142738 1.0351441339920824 0.9104762895873774 1.0042547902102201 1.0949050263776534 1.0605975715649376 1.0 10.342235582610192 -7.479975570060725 24.999858210605172 1.030485961769026 1.0902335817850424 0.15305395270277744 0.08052058497901284 935.0526656372895 544859.1820537734 0.01330719164815008 0.021272087645473673 3.311497487989786e-08 7.479975570060725 0.0597476200160163 T(ph)RSVEDDEEGHLICQSGDVLSAR ddPTM_A549_MK2206_60min_R1 1 TRSVEDDEEGHLICQSGDVLSAR 23 1 F8WBF5;P49759;P49759-3 F8WBF5 CLK1 Dual specificity protein kinase CLK1 1 T(0.5)RS(0.5)VEDDEEGHLICQSGDVLSAR 85.48899999999999 7.626699999999999e-06 1744500.0 426.67 273.38 319.82 192.3 390.38 427.79 352.26 304.18 376.34 518.09 376.96 True False 498.68146492002904 287.29387429960974 365.17528509729806 239.41350863267505 332.95561913325895 473.05845385598025 416.261082272704 347.29844651218116 291.09959089148765 401.05310917086825 283.35042843326545 1.7599460416467245 1.013917204530619 1.2887761882573048 0.8449378741245193 1.1750665808916414 1.6695173410242248 1.4690681237870145 1.225685270470578 1.0273483350671808 1.4153961629365388 1.0 8.146443573616482 -8.703087007622864 3.8837150481554565 1.011770515025059 1.297345835376766 0.0039384419854811 0.27730239235401727 0.2601133162921298 7.925807861706331 0.043087207824182426 0.04808568709999385 1.9811300815790573e-09 8.703087007622864 0.28557532035170685 T(ph)RSWAGER ddPTM_A549_MK2206_60min_R1 1 TRSWAGER 8 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 T(0.591)RS(0.409)WAGER 51.013000000000005 0.011918000000000002 13472000.0 695.68 804.29 491.66 427.53 916.65 939.63 959.69 840.56 1445.2 1214.0 1279.2 True False 813.093776256981 845.2249255996528 561.3847810360129 532.2748691925508 781.811999278912 1039.0610229240854 1134.0532505714293 959.7119541070385 1117.8645075101713 939.7565568403821 961.5393358760421 0.8456167583785692 0.8790331233090769 0.5838396413855964 0.5535653605971349 0.8130837399040118 1.0806224812190492 1.1794143081397839 0.9980995246883596 1.1625780306654891 0.9773459304025103 1.0 9.909202068153714 -7.17302651334815 3.860228097498709 1.0811162881755607 0.7151427070534222 0.7011936908163287 0.10850942044792543 0.10186781319400125 2.832163460632813 0.017017022041765577 0.03015333705598122 6.71387863955808e-08 7.17302651334815 -0.3659735811221385 T(ph)RSYDNLTTACDNTVPLASR ddPTM_A549_MK2206_60min_R1 1 TRSYDNLTTACDNTVPLASR 20 1 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 T(0.617)RS(0.383)YDNLTTACDNTVPLASR 157.24 3.7064999999999995e-27 8257300.0 2470.5 2678.0 2319.8 2382.8 2874.3 2953.5 2273.5 1996.4 3417.7 2926.3 3901.3 True False 2887.4600020740436 2814.29876133717 2648.7825225711736 2966.586106967958 2451.4942775621857 3266.037409625373 2686.565521339334 2279.3958137185814 2643.596406945413 2265.246797596384 2932.499539597564 0.9846412465150118 0.9596928229094915 0.9032507888934483 1.0116237247133795 0.8359743094447721 1.1137384219584845 0.9161350189702058 0.7772876970447504 0.9014822922387234 0.7724627973538407 1.0 11.517915166412763 T(ph)RSYDNLTTACDNTVPLASR ddPTM_A549_PD325901_60min_R1 2 TRSYDNLTTACDNTVPLASR 20 1 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 T(0.5)RS(0.5)YDNLTTACDNTVPLASR;T(0.523)RS(0.477)YDNLTTACDNTVPLASR 216.48 3.8353999999999993e-67 42983000.0 6307.7 6699.2 6821.4 5277.9 6289.9 6293.0 6154.0 7271.2 6448.4 7192.0 7065.2 True False 6948.053060516688 7263.7650948444425 7284.341224410479 5603.903896019411 5848.119122977012 6241.7518944375 6388.193837598014 7126.170211853947 6177.396172915047 6737.895892605603 6196.2251899928815 1.1213364342758287 1.1722887519607381 1.1756095043438612 0.9044061060062681 0.9438196552994761 1.0073474902942756 1.0309815479132631 1.1500825088415054 0.9969612116247415 1.0874194668533899 1.0 12.597173861743464 -6.241108865612171 24.9699021534216 1.0033472302109077 1.1579993046717483 0.4874318861536261 0.0636912906121196 449.2509953064465 551768.5817684085 0.008321003191573764 0.021984115891361535 5.7397256512903e-07 6.241108865612171 0.15465207446084062 T(ph)RT(ph)DSYSAGQSVEILDGVELGEPAHK ddPTM_A549_PD325901_60min_R1 1 TRTDSYSAGQSVEILDGVELGEPAHK 26 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 2 T(0.336)RT(0.356)DS(0.339)Y(0.386)S(0.325)AGQS(0.258)VEILDGVELGEPAHK 48.946999999999996 0.0026905 3305900.0 1025.6 1351.2 1097.8 1411.9 1068.3 1103.9 1048.7 1131.0 879.24 1135.7 1174.3 True False 1129.7181569931843 1465.070366036813 1172.303309607679 1499.109856342447 993.2662934349254 1094.910204396879 1088.6088523706596 1108.4413177476636 842.288600439462 1063.991708180225 1029.8685445010242 1.0969537452379785 1.4225799728125943 1.138303830976472 1.45563224000474 0.9644592979739635 1.0631553029201097 1.0570367045224158 1.0762939830196563 0.8178603035667572 1.0331335138464042 1.0 10.008244483915519 -7.3100195103932215 0.875146016024631 0.9243033347563969 1.2772517519046185 0.39098301916845535 0.13883791650189667 0.3347990398980936 0.5059220881876735 0.0239464327332564 0.05672324247104466 4.897568168721785e-08 7.3100195103932215 0.35294841714822156 T(ph)RTDSYSAGQSVEILDGVELGEPAHKK ddPTM_A549_MK2206_60min_R1 2 TRTDSYSAGQSVEILDGVELGEPAHKK 27 2 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.364)RT(0.092)DS(0.307)Y(0.107)S(0.128)AGQS(0.003)VEILDGVELGEPAHKK;T(0.486)RT(0.102)DS(0.383)YS(0.029)AGQSVEILDGVELGEPAHKK 192.89 1.5301999999999999e-58 35459000.0 1757.06 1728.58 1693.2399999999998 1585.97 3324.6 1917.03 2472.27 2150.45 3735.6 2822.1 2981.8999999999996 True False 2053.608772007375 1816.5573386378649 1933.3668930590609 1974.5327211968977 2835.555744070988 2119.888842178475 2921.4494574187775 2455.2828729769203 2889.4925645273975 2184.5856499664283 2241.4119337466927 0.9162121166075037 0.810452247214259 0.8625665206606129 0.8809325458958872 1.2650756879531457 0.9457827944348085 1.303396940755709 1.095417953304427 1.2891394575995623 0.9746471039416325 1.0 11.130192100917577 -6.703239915222997 8.837155009168558 1.1418171052397563 0.8620001405466468 0.5135605438790799 0.11967736200442732 0.18831727717471922 26.361627020721606 0.01790307428829977 0.03727119904326785 1.9804326826089678e-07 6.703239915222997 -0.27981696469310957 T(ph)RTDSYSAGQSVEILDGVELGEPAHKK ddPTM_A549_PD325901_60min_R1 1 TRTDSYSAGQSVEILDGVELGEPAHKK 27 2 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.735)RT(0.154)DS(0.1)YS(0.011)AGQSVEILDGVELGEPAHKK 170.01 1.7712e-48 31524000.0 1100.7 1192.6 1017.9 1340.9 980.63 943.76 1082.7 1191.1 1548.1 1604.0 1317.2 True False 1212.4422537074875 1293.1045874300632 1086.9808151299478 1423.7243475951475 911.7539317898443 936.0743314626305 1123.902740976173 1167.3425761001258 1483.0387406627665 1502.7231662596469 1155.1927504187606 1.0495583990359822 1.1193842646271015 0.9409519015211221 1.2324560962480446 0.7892656281467582 0.8103187378238834 0.9729136030058664 1.010517574384847 1.2838019803406495 1.3008419293792362 1.0 10.17391787818426 -8.551595350055024 24.80838229931445 1.134709333068171 0.9864411698184032 0.2659938451819802 0.14216054638956574 259.5892895413144 224258.95732998304 0.026101785341131566 0.029596880318975165 2.80804879343642e-09 8.551595350055024 -0.14826816324976777 T(ph)RTPASINATPANINLADLTR ddPTM_A549_MK2206_60min_R1 3 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 T(0.5)RT(0.5)PASINATPANINLADLTR;T(0.61)RT(0.39)PASINATPANINLADLTR;T(0.5)RT(0.5)PASINATPANINLADLTR 138.23 1.6608e-18 44985800.0 3288.43 4178.01 4308.3 2869.04 5414.08 4260.63 4072.42 3706.4000000000005 6091.7 5058.299999999999 4722.3 True False 3843.4365896054833 4390.6528632764375 4919.281723421584 3571.9549287961013 4617.676003988408 4711.487038622702 4812.325999741688 4231.793550373954 4711.939676445965 3915.6265168580762 3549.62258115028 1.082773309482382 1.2369351284252919 1.3858604995203339 1.0062914710325581 1.300892108504679 1.3273205618091126 1.3557289232091319 1.1921812681850281 1.3274480789783087 1.103110662426874 1.0 11.793449920758505 -10.865822122881005 1.053777014155592 0.9965118653097211 1.2540147922477343 0.28637312102596657 0.1145409660062942 0.4131842607214052 0.7961946359947283 0.08040780608130617 0.018434613250888278 1.3620024133796036e-11 10.865822122881005 0.25750292693801313 T(ph)RTPASINATPANINLADLTR ddPTM_A549_PD325901_60min_R1 2 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 T(0.634)RT(0.366)PASINATPANINLADLTR;T(0.5)RT(0.5)PASINATPANINLADLTR 204.05 2.7382e-56 88090000.0 2833.2 3323.5 2904.71 3664.1 4005.2 3324.5 2926.14 3292.1 3694.8999999999996 4513.2 3806.2 True False 3120.8243783083944 3603.5830088242656 3101.841088040193 3890.423135225129 3723.8885691898936 3297.42637423446 3037.4958589452485 3226.436482897512 3539.616202360864 4228.235781772469 3338.0615294897393 0.9349211662930156 1.0795436144567157 0.9292342458751336 1.1654737639961432 1.1155841605349714 0.9878267207191083 0.9099580196802317 0.9665599194005 1.0603807542462929 1.2666740095766906 1.0 11.70479483237386 T(ph)RTSQEELLAEVVQGQSR ddPTM_A549_MK2206_60min_R1 1 TRTSQEELLAEVVQGQSR 18 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 T(0.333)RT(0.333)S(0.333)QEELLAEVVQGQSR 70.994 0.00042465 2388400.0 865.65 758.35 571.08 728.68 753.64 428.52 747.44 709.39 941.34 866.48 1036.1 True False 1011.750556889454 796.9467758252584 652.0677312656031 907.206632711688 642.7805543408708 473.86570197144545 883.2401729799301 809.9482049157613 728.1279930110884 670.7415662035042 778.8077750947213 1.2991017671419645 1.0232907288686621 0.8372640234444199 1.1648659164982662 0.8253391592844507 0.6084501428016846 1.134092649335078 1.039984744396334 0.9349264559185109 0.8612414868635927 1.0 9.605123476804946 -5.29430760998757 3.6443038440395776 0.9565576261506764 1.3262016266086376 0.32239577839299804 0.14971187328740787 0.21606957814749553 5.175834370150929 0.019147595051252145 0.20406519360064035 5.077996415946202e-06 5.29430760998757 0.3696440004579612 T(ph)RTSQEELLAEVVQGQSR ddPTM_A549_PD325901_60min_R1 2 TRTSQEELLAEVVQGQSR 18 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 T(0.333)RT(0.333)S(0.333)QEELLAEVVQGQSR;T(0.333)RT(0.333)S(0.333)QEELLAEVVQGQSR 124.0 5.8077e-11 6984100.0 1282.88 1473.2800000000002 1347.76 1227.83 1430.13 1519.03 1404.37 1497.6399999999999 1507.11 1607.73 1741.98 True False 1413.117033193659 1597.4384760766106 1439.2270983392664 1303.6702704957486 1329.6826024806617 1506.6595233127916 1457.8140688507517 1467.7683953241485 1443.7714078162026 1506.2176534230819 1527.727503321038 0.9249797690502828 1.0456305019082472 0.942070555914333 0.8533395305522585 0.8703663445150669 0.9862095956494545 0.9542369733356861 0.9607527468959302 0.9450451109099443 0.9859203622038635 1.0 10.577171521317128 T(ph)RTWESVKR ddPTM_A549_MK2206_60min_R1 2 TRTWESVKR 9 2 C9JYY9;A6NCQ0;A6NJU6;Q9UKK9 C9JYY9 NUDT5 ADP-sugar pyrophosphatase 1 T(0.5)RT(0.5)WESVKR;T(0.5)RT(0.5)WESVKR 42.556000000000004 0.026545999999999997 9840300.0 1473.49 1436.37 957.4 961.9200000000001 1967.81 1239.35 1338.4699999999998 1595.98 2190.8999999999996 2226.94 1864.92 True False 1722.179088628247 1509.4750977676883 1093.1737163159062 1197.5904431822303 1678.347755742144 1370.4971943860521 1581.6526735636935 1822.2150524837623 1694.6646481483756 1723.8727073229988 1401.8088948264142 1.2285405628286474 1.0768051931605174 0.7798307746158749 0.8543179085267024 1.197272867889723 0.9776633601370895 1.128294077317543 1.2999026181164353 1.2089127515189764 1.2297487294346678 1.0 10.453073968334046 -6.771830350612552 24.999710341132868 1.1149170796826728 0.9767942205010004 0.2127656388711303 0.14219724102179035 299.15456525566617 719738.8806433745 0.022013309441750253 0.04192252696093516 1.6911014012117348e-07 6.771830350612552 -0.13812285918167244 T(ph)RTWESVKR ddPTM_A549_PD325901_60min_R1 1 TRTWESVKR 9 2 C9JYY9;A6NCQ0;A6NJU6;Q9UKK9 C9JYY9 NUDT5 ADP-sugar pyrophosphatase 1 T(0.555)RT(0.445)WESVKR 41.54 0.030175 3225700.0 737.67 621.87 698.98 822.06 630.56 795.57 594.81 646.01 785.54 663.4 1214.4 True False 812.5577153560474 674.277167352955 746.4169861081944 872.8367791662807 586.2716409139065 789.0911416903928 617.4458200425213 633.1248237649586 752.5264855889343 621.5128107834477 1065.0364987158691 0.7629388441952559 0.6331024036884569 0.7008370013686487 0.8195369644314289 0.5504709384333619 0.7409052578402825 0.5797414649986036 0.5944630296974113 0.7065734240059068 0.5835601047783952 1.0 10.05668715700438 -10.346093738052115 0.7633179249398079 0.9979280826904323 0.6729674707959615 0.0 0.14390008028301304 0.27359830253502315 0.2948417908622858 0.04931463076274024 0.015632045132422865 4.507194108357371e-11 10.346093738052115 -0.3249606118944708 T(ph)S(ph)RDTSPSSGSAVSSSK ddPTM_A549_MK2206_60min_R1 1 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 T(0.566)S(0.6)RDT(0.394)S(0.261)PS(0.088)S(0.08)GS(0.012)AVSSSK 61.511 0.0017992999999999998 27229000.0 9407.0 10128.0 8057.5 8156.5 6698.1 5376.4 4770.3 5438.9 6980.0 12380.0 11508.0 True False 10994.671620931196 10643.471939814359 9200.174659719463 10154.842866159193 5712.818362919418 5945.327079434514 5637.001762236648 6209.880730932681 5399.04114476958 9583.349401716589 8650.245995357644 1.271024156634591 1.2304241920433738 1.0635737601747917 1.1739368882236443 0.6604226476316784 0.687301503636453 0.6516579719538469 0.7178848710505296 0.6241488563061792 1.107870158474073 1.0 13.078525445300032 -6.750434698103684 24.920839410117917 0.7777562474360016 1.1793483424553932 0.6289017641152881 0.15010408031007585 113.84894753743545 257816.71378091627 0.02304300714196192 0.047606362955149986 1.7765003684391603e-07 6.750434698103684 0.40159209501939164 T(ph)SAPAT(ph)PEIQGR ddPTM_A549_MK2206_60min_R1 1 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 2 T(0.99)S(0.01)APAT(1)PEIQGR 107.37 0.00049665 3615500.0 714.56 563.39 769.45 703.19 1021.0 687.72 612.42 618.95 937.18 898.25 998.27 True False 835.1602586852983 592.0641445667466 878.569580132938 875.471581567399 870.8122525105217 760.4940739284102 723.6887867071182 706.6880579548773 724.9102263689331 695.3347011382816 750.3720081496067 1.1129949539892576 0.7890274932120106 1.1708453548253517 1.1667167379101517 1.1605073790771017 1.0134893968176721 0.9644400095516776 0.9417836090361997 0.9660677883714485 0.9266533047427431 1.0 9.55146220038791 -7.511304607601461 21.57429290208568 0.9788609282723132 1.07504312413266 0.23242805699141966 0.10137706013307374 126.40904531814216 235626.50549613722 0.015139008206032237 0.02338996724768136 3.0810262069040365e-08 7.511304607601461 0.09618219586034671 T(ph)SAPAT(ph)PEIQGR ddPTM_A549_PD325901_60min_R1 1 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 2 T(0.912)S(0.088)APAT(1)PEIQGR 96.866 0.00096377 7182100.0 847.08 1043.8 1195.9 1180.4 1340.0 1414.7 1105.4 1212.1 1172.7 1142.2 1080.1 True False 933.0749380126628 1131.7646892164182 1277.0609655309022 1253.3106271170943 1245.8830227490416 1403.1791522422905 1147.4666018980904 1187.9237146259443 1123.415497174102 1070.081297070929 947.2545473180247 0.9850308353277281 1.1947841183985863 1.3481708471568314 1.3230980317440655 1.3152568401772553 1.4813116033226037 1.2113603520267375 1.2540702158562655 1.1859700228991714 1.1296660439378892 1.0 9.887608350217251 -9.74456955822139 0.7072347477543188 1.0164286728161116 1.275730118032504 0.2655250444426306 0.1209818078162777 0.4494882809419229 0.47510552375552195 0.05250812766567984 0.026971525310594623 1.800654711781438e-10 9.74456955822139 0.2593014452163924 T(ph)SAPATPEIQGR ddPTM_A549_MK2206_60min_R1 1 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 T(0.857)S(0.143)APATPEIQGR 209.43 2.1557e-31 24019000.0 3638.5 4097.5 3236.6 3144.6 4117.0 3438.1 3465.8 3404.0 4744.1 4651.8 4536.0 True False 4252.589847215708 4306.045248162455 3695.5985483894533 3915.0271411664557 3511.39475375692 3801.917459973925 4095.4909979581535 3886.5274243127924 3669.568924770971 3600.95514918459 3409.586012768704 1.2472452172463175 1.262923191272067 1.0838848278206352 1.1482412018658288 1.029859560840216 1.1150671799262322 1.2011695797145971 1.13988249885997 1.07625058028413 1.0561267953643696 1.0 11.735380864502973 -2.0000000002739187 0.07070886956968836 0.8504542396429253 1.7941751162918478 0.4537729820949705 0.06065845740533773 115.34487728612753 0.5848609966600994 1.3280889023258626 10.803553599189721 0.00999999999369279 2.0000000002739187 0.9437208766489225 T(ph)SDSDQQAYLVQR ddPTM_A549_MK2206_60min_R1 1 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.495)S(0.495)DS(0.009)DQQAYLVQR 246.31 3.2866e-57 49467000.0 3176.9 3116.0 3103.5 3491.6 4161.6 3331.5 2328.3 2474.1 4311.8 4155.7 3771.0 True False 3713.0830522521865 3274.591090487908 3543.6229669797567 4347.0421567438825 3549.434152838184 3684.0371187292794 2751.3219719966423 2824.811251613476 3335.184184529723 3216.9244837410033 2834.556625694619 1.3099343363240383 1.1552392571044359 1.2501507060602037 1.5335880459536146 1.2522008276932488 1.299687254554843 0.9706357414265522 0.9965619405896488 1.1766158256628312 1.134895120662013 1.0 11.46890737470241 -7.7450907306540415 24.581480200680346 1.0699372754510288 1.2997082611965207 0.5822989783408268 0.10274608763846527 127.66443956506711 191952.92995142462 0.017215174355432815 0.02549000122266716 1.7984951431725347e-08 7.7450907306540415 0.22977098574549193 T(ph)SDSDQQAYLVQR ddPTM_A549_PD325901_60min_R1 1 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.861)S(0.137)DS(0.002)DQQAYLVQR 180.85 4.6404e-24 23535000.0 10839.0 11137.0 10815.0 11710.0 13042.0 12168.0 11720.0 13883.0 15200.0 18627.0 21530.0 True False 11939.367300749924 12075.554075304906 11548.970935878177 12433.300104660431 12125.974912457463 12068.907842287548 12166.011013430081 13606.09267399719 14561.19685942385 17450.888041096285 18881.946489914906 0.6323165520634695 0.6395290910158344 0.6116409101173247 0.6584755502459039 0.6421994108994061 0.6391771022512805 0.6443197484924611 0.7205873971343145 0.7711703275507732 0.9242102264412746 1.0 14.204719875530872 -9.74951783527373 0.4306747619779817 1.026184189502649 0.6195752477305091 0.9564270823592752 0.02599600040305349 0.11255294233962766 0.04387290289601712 0.018793586863664943 0.007271842586039449 1.780254797209627e-10 9.74951783527373 -0.4066089417721398 T(ph)SDSEVPDVESREDLIK ddPTM_A549_MK2206_60min_R1 2 TSDSEVPDVESREDLIK 17 1 Q6ZMI0 Q6ZMI0 PPP1R21 Protein phosphatase 1 regulatory subunit 21 1 T(0.5)S(0.5)DSEVPDVESREDLIK;T(0.499)S(0.499)DS(0.001)EVPDVESREDLIK 107.33 3.7542e-09 4253700.0 1675.42 1695.18 2031.6999999999998 1762.55 2008.4099999999999 1446.23 1508.55 1755.49 2940.2 2370.7 2689.8 True False 1958.1899359137392 1781.4574213007993 2319.8256104439406 2194.3748291238753 1712.9755495246397 1599.2690986702212 1782.634008012513 2004.3360834626512 2274.249394534602 1835.1572234773425 2021.8484252965748 0.968514707340884 0.8811033502867488 1.1473785974354913 1.0853310276224062 0.8472324275611175 0.7909935674013904 0.8816852864482299 0.9913384497003752 1.124836741508456 0.9076631069453945 1.0 10.981459129445227 -8.530864894428758 19.331179005198766 1.0589054698592926 0.9439920976771632 0.024745821377343713 0.1100591892080278 15.214664058882605 36825.95392986688 0.018927436851746752 0.02151146316790944 2.945337762525304e-09 8.530864894428758 -0.11491337218212938 T(ph)SDTETEPSK ddPTM_A549_PD325901_60min_R1 1 TSDTETEPSK 10 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.887)S(0.111)DT(0.002)ETEPSK 115.04 9.6738e-05 6452300.0 2149.7 2087.1 2337.0 2330.5 2571.2 2021.8 1964.4 2229.6 2340.4 2130.8 2516.6 True False 2367.9359614745026 2262.987241678086 2495.602873522633 2474.449692050482 2390.6077821584568 2005.3351311256542 2039.1563169609258 2185.128878912635 2242.0411269602346 1996.2609243553975 2207.0741540417926 1.0728846410249178 1.0253335790888132 1.130729055456728 1.1211447914058743 1.0831569830948184 0.9085943612058999 0.9239183528231888 0.9900568473927488 1.015843134610773 0.9044829421338948 1.0 11.10791938726155 -7.116776908774207 10.87296528359806 0.9930726285101235 1.0881499792090479 0.5808765853961739 0.0499306878251596 0.3055132031288408 26.760110149317786 0.006848076429285915 0.01186743605078989 7.642282565269295e-08 7.116776908774207 0.09507735069892442 T(ph)SDVGGYYYEK ddPTM_A549_MK2206_60min_R1 1 TSDVGGYYYEK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.652)S(0.348)DVGGYYYEK 190.35 5.3697e-19 27431000.0 5794.4 5811.1 6129.7 4517.1 8112.9 6547.3 6362.7 6993.4 8511.2 8287.0 7997.5 True False 6772.353060521288 6106.86016878507 6998.983631608116 5623.789702780328 6919.503157093641 7240.130940254005 7518.720229877179 7984.735866389273 6583.426789593533 6414.960944428539 6011.500030228774 1.1265662524272761 1.0158629523541176 1.1642657567019528 0.9355052273976797 1.1510443520417502 1.2043800888043035 1.2507228132860952 1.328243504323064 1.0951387767593495 1.0671148485687374 1.0 12.553509311563781 -9.66993375549755 1.4569479118254023 1.0220041049303665 1.1412620089783665 0.13970830413171298 0.10206757397109731 0.4464654276903387 1.9154590589695448 0.027292607021828324 0.020105546412649514 2.1382882254373206e-10 9.66993375549755 0.11925790404799996 T(ph)SDVGGYYYEK ddPTM_A549_PD325901_60min_R1 2 TSDVGGYYYEK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.644)S(0.356)DVGGYYYEK;T(0.858)S(0.142)DVGGYYYEK 296.28 2.0087999999999996e-109 102450000.0 26925.7 26473.4 27062.1 26084.9 27713.5 24484.9 26096.1 24876.6 27256.0 28246.8 29071.1 True False 29659.17724234731 28704.406326405395 28898.696843627233 27696.10502989383 25766.999366384745 24285.503092342733 27089.201365833836 24380.41669768482 26110.525105293185 26463.292227370945 25495.53899688643 1.1633085005957062 1.1258599525944848 1.1334805217162267 1.086311806676303 1.0106473673504792 0.9525393087515637 1.0625074986311145 0.9562620621851615 1.0241213221058736 1.0379577474554549 1.0 14.637957217610662 -6.569885039773153 2.46891732739932 1.0065193037742448 1.1397045193769684 0.7852453993756767 0.03130140429149467 0.0880031252296279 1.0773232910744066 0.004069266411822499 0.0098933610939687 2.6922473628487576e-07 6.569885039773153 0.13318521560272356 T(ph)SEISIPADLDK ddPTM_A549_MK2206_60min_R1 1 TSEISIPADLDK 12 0 P46939;P46939-2;P46939-4 P46939 UTRN Utrophin 1 T(0.5)S(0.5)EISIPADLDK 81.494 0.00077304 1044400.0 1245.0 1608.9 1245.8 1071.6 1757.8 1243.4 1090.1 1233.6 1863.7 1621.8 1842.5 True False 1455.125562672408 1690.7861378324753 1422.4731729542061 1334.1420481059524 1499.2299485435792 1374.9757626978792 1288.1570595170463 1408.4665777415562 1441.574925717345 1255.4342536109818 1384.956399586936 1.050665250621897 1.2208226470788202 1.0270887757755114 0.9633097825345701 1.0825105750554498 0.9927935371163789 0.930106579457115 1.0169753922662346 1.0408810892150073 0.906479260997253 1.0 10.435624843543177 -5.893462516707843 8.386201380860033 1.012191161020947 1.1350953269228756 0.42080068908662727 0.0611354962425786 0.14411922688772888 10.326580501890108 0.00664236044249455 0.02079133776223776 1.2780195087144603e-06 5.893462516707843 0.12290416590192854 T(ph)SESLENEPENLVR ddPTM_A549_PD325901_60min_R1 2 TSESLENEPENLVR 14 0 Q8TD26 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 1 T(0.487)S(0.487)ES(0.026)LENEPENLVR;T(0.498)S(0.498)ES(0.004)LENEPENLVR 53.754 0.020441 2449170.0 1130.12 1098.56 1197.8000000000002 1391.19 839.8299999999999 1033.03 1074.74 1442.76 1724.24 1814.5500000000002 2191.65 True False 1244.8489504496272 1191.1395065966556 1279.0899109565303 1477.1206466782705 780.8432380562143 1024.6173461800042 1115.6398188202943 1413.9830199766748 1651.7761890061158 1699.9790033269608 1922.0909440140267 0.6476535120913315 0.6197102745352527 0.6654679451771018 0.7684967515603107 0.4062467702103257 0.5330743320814101 0.5804302976894692 0.7356483439975856 0.8593642221510106 0.8844425434817277 1.0 10.908460883715481 -8.788079939872308 1.3682119342420451 0.9516430859248725 0.6013447005557141 0.696771407896497 0.090056948241378 0.1471633870448012 0.5432303876867545 0.019312077999949363 0.020402128867788305 1.6289961583933176e-09 8.788079939872308 -0.35029838536915836 T(ph)SFRKPKEDEVEASEK ddPTM_A549_MK2206_60min_R1 2 TSFRKPKEDEVEASEK 16 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 T(0.5)S(0.5)FRKPKEDEVEASEK;T(0.5)S(0.5)FRKPKEDEVEASEK 83.84899999999999 3.3600000000000004e-05 10751300.0 1258.8400000000001 1594.33 1410.17 1636.15 2744.7 1333.2 1130.13 904.68 2441.5 2393.5 2757.8 True False 1471.3014163168946 1675.4745870659774 1610.1533105673718 2037.0068234495657 2340.9582658821037 1474.2783390934642 1335.4599923603334 1032.9211604663035 1888.5041482743454 1852.806687642056 2072.9621485920493 0.7097579747494178 0.8082514136613423 0.7767403334696603 0.9826550980842056 1.129281722520634 0.7111940466905247 0.6442278713421634 0.4982826923144067 0.9110171884021195 0.8937966807066292 1.0 11.017478058351529 -8.982702672570799 22.559401060138015 0.9607435753692684 0.788838317249788 0.15474114330441657 0.15886813446861006 47.766067662418024 62299.66913212464 0.03035798538386512 0.030790649889992066 1.0406323615118127e-09 8.982702672570799 -0.17190525811948032 T(ph)SFRKPKEDEVEASEK ddPTM_A549_PD325901_60min_R1 2 TSFRKPKEDEVEASEK 16 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 T(0.5)S(0.5)FRKPKEDEVEASEK;T(0.5)S(0.5)FRKPKEDEVEASEK 88.396 5.5243e-06 26900400.0 3085.6000000000004 3461.9 3814.2999999999997 4285.9 4757.299999999999 5515.8 4927.6 5607.7 4533.200000000001 4707.4 5029.7 True False 3398.847840501338 3753.6464625391086 4073.1613352491977 4550.6303090148685 4423.163659794039 5470.881153557661 5115.122514486182 5495.85002434445 4342.685368627647 4410.173960630088 4411.078785895258 0.7705253080877627 0.8509588345013613 0.9233934674378124 1.0316365972799753 1.002739664033529 1.2402592243537334 1.159608060241897 1.2459197151313246 0.9844950814557419 0.9997948743812821 1.0 12.10691581317322 -5.875129862336086 1.5083152683582985 1.0442198762079118 0.7741108170520185 0.537595934962972 0.09653374331861878 0.3763331405374466 1.4618749388697438 0.016401554410669598 0.10715492064784367 1.3331227434233073e-06 5.875129862336086 -0.27010905915589334 T(ph)SFSFQK ddPTM_A549_MK2206_60min_R1 1 TSFSFQK 7 0 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 T(0.916)S(0.081)FS(0.003)FQK 96.66799999999999 0.012440000000000001 8325000.0 4045.5 5957.7 5149.4 4300.5 6040.1 5336.3 4840.3 4846.2 6728.4 6087.4 6397.4 True False 4728.281497021067 6260.921482605845 5879.662350947494 5354.122693056783 5151.60929127209 5900.983724050745 5719.719856141968 5533.163690865054 5204.428143046942 4712.2521121170885 4808.749020742176 0.9832664330423528 1.3019854967684594 1.222701023818464 1.1134127961268467 1.0712992649545676 1.2271348948754233 1.1894402954844157 1.150645140138978 1.0822831719014725 0.9799330536468309 1.0 12.231445915392337 -9.250819286116695 0.900742532966259 1.0169866550579945 1.1655474417963907 0.3654079315945511 0.08231727982892877 0.37546403385687577 0.6461651216209121 0.021745161396334995 0.017427310869058747 5.612814817759158e-10 9.250819286116695 0.14856078673839623 T(ph)SFSFQK ddPTM_A549_PD325901_60min_R1 2 TSFSFQK 7 0 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 T(0.988)S(0.012)FSFQK;T(0.897)S(0.103)FSFQK 128.0 0.0061152 17768400.0 7693.700000000001 7446.0 7853.900000000001 8697.8 10078.0 8448.3 8162.5 8656.8 9427.4 9160.900000000001 9214.5 True False 8474.75876019741 8073.500551739272 8386.912883337358 9235.043351862982 9370.156047212566 8379.49984582494 8473.128404191384 8484.133332871781 9031.19916266661 8582.479210591031 8081.1749155281395 1.0487037898304852 0.999050340591673 1.0378333560410549 1.1427847371695494 1.1595041742268966 1.0369160342914447 1.0485020424332232 1.0498638405375125 1.1175601638460986 1.062033590449778 1.0 12.980349345161352 -11.04295427235295 1.343648859496091 1.0000222306281474 1.0759599240159654 0.03289827411765078 0.05015073275121037 0.5354199412792044 1.7241003269372932 0.03663705775119191 0.008202416950859279 9.058279721334645e-12 11.04295427235295 0.07593769338781797 T(ph)SFSVGS(ph)DDELGPIR ddPTM_A549_PD325901_60min_R1 1 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 2 T(0.974)S(0.026)FS(0.017)VGS(0.983)DDELGPIR 125.5 2.2041999999999998e-07 2567300.0 1624.1 1851.8 1890.9 1944.8 1745.4 1756.2 1643.9 2113.7 2009.0 2473.4 2807.1 True False 1788.9774364007715 2007.8576848926655 2019.2278449054127 2064.9258790387366 1622.8091253031157 1741.8980894662536 1706.459514076597 2071.5405953344284 1924.5687164856906 2317.229101886915 2461.844495673019 0.7266817378372636 0.8155907850482479 0.8202093383454734 0.8387718569016388 0.6591842531709023 0.7075581307137165 0.69316299915608 0.8414587513449384 0.7817588478347622 0.9412572995409407 1.0 11.265523920405377 -10.476285705604138 0.6034651928198471 1.0192865491940992 0.7599481091174974 0.6329931334309764 0.06037821519279229 0.4533405163445488 0.2680968658499121 0.06139082575827502 0.013636080684066576 3.3397525828835725e-11 10.476285705604138 -0.2593384400766018 T(ph)SGETTHTHREPAGDGK ddPTM_A549_MK2206_60min_R1 2 TSGETTHTHREPAGDGK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.49)S(0.49)GET(0.018)T(0.002)HTHREPAGDGK;T(0.497)S(0.497)GET(0.005)THTHREPAGDGK 111.57 2.4377e-09 15931900.0 1286.15 1162.52 910.88 875.88 1281.97 880.85 933.65 1231.49 1552.27 1580.6799999999998 1967.25 True False 1503.2206766515012 1221.68730247561 1040.0564807999094 1090.4706393197469 1093.3939112153903 974.0609623390919 1103.2821196386483 1406.0574787799526 1200.683323465827 1223.6032901700626 1478.7275316620896 1.016563663328755 0.8261747186802112 0.7033455849915001 0.737438517895219 0.7394154012851952 0.6587156467183968 0.7461023724895142 0.9508563604003126 0.8119706286365407 0.8274704189721365 1.0 10.530140532546886 -10.360182417280145 0.5085503314288063 1.0221542937021344 0.7800452936201713 0.07765184921388868 0.11091290219439749 1.022827408206182 0.4303325821532425 0.11650945554072145 0.02607202408801204 4.3633252042437557e-11 10.360182417280145 -0.24210900008196312 T(ph)SGETTHTHREPAGDGK ddPTM_A549_PD325901_60min_R1 2 TSGETTHTHREPAGDGK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.49)S(0.49)GET(0.019)T(0.002)HTHREPAGDGK;T(0.496)S(0.496)GET(0.003)T(0.005)HTHREPAGDGK 84.946 4.7455e-05 26116000.0 1366.9699999999998 1945.45 1619.8600000000001 1395.3200000000002 2071.75 1952.1999999999998 1613.76 2208.1000000000004 1763.97 2071.8 2512.0 True False 1505.7437880898729 2109.399899057368 1729.7934406094887 1481.5057473983593 1926.2374271494957 1936.3019304498469 1675.172519883355 2164.0577132790613 1689.8364752709144 1940.9861944244 2203.0399248799927 0.6834845665231855 0.9574950845124945 0.7851847899232769 0.6724824778103202 0.8743542980749315 0.8789227596750541 0.7603913578527669 0.9823052632134868 0.767047594638107 0.8810490325227004 1.0 11.105279925367903 -10.944427722125733 0.8840085507539911 1.0156791767047353 0.8181880686259598 0.14224405847021526 0.10116958235366025 0.6650656913341817 0.7936537324485863 0.09454466119301239 0.016018200288780687 1.1365074262636567e-11 10.944427722125733 -0.19749110807877546 T(ph)SGETTQTHTEPTGDSK ddPTM_A549_MK2206_60min_R1 4 TSGETTQTHTEPTGDSK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.464)S(0.464)GET(0.032)T(0.032)QT(0.008)HTEPTGDSK;T(0.495)S(0.495)GET(0.004)T(0.004)QT(0.002)HTEPTGDSK;T(0.499)S(0.499)GET(0.002)T(0.001)QTHTEPTGDSK;T(0.494)S(0.494)GET(0.005)T(0.005)QT(0.001)HTEPTGDSK 168.3 8.9022e-30 46125300.0 3325.63 4267.86 3675.21 3982.6400000000003 4860.9400000000005 3732.0200000000004 3155.06 4641.3 5932.39 6487.87 7198.389999999999 True False 3886.915040152802 4485.075844496061 4196.410041718595 4958.386978787501 4145.902165248282 4126.939879285622 3728.2935622418636 5299.21848838512 4588.713137080175 5022.255660978593 5410.831097542794 0.7183582281690434 0.8289070132928112 0.7755573896262071 0.9163817700832022 0.7662228020998565 0.762718296854577 0.6890426803259454 0.9793723723499037 0.8480606868626956 0.928185628130092 1.0 12.401634492062549 -10.277562500341489 0.34182730671550204 1.0498319393820124 0.7828513420370994 0.40201180144835114 0.07799801721588795 1.4632330260014514 0.27410150079214984 0.14736924765019457 0.032671179145209915 5.277612499519875e-11 10.277562500341489 -0.266980597344913 T(ph)SGETTQTHTEPTGDSK ddPTM_A549_PD325901_60min_R1 4 TSGETTQTHTEPTGDSK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.475)S(0.475)GET(0.022)T(0.027)QT(0.001)HTEPTGDSK;T(0.466)S(0.466)GET(0.03)T(0.03)QT(0.007)HTEPTGDSK;T(0.499)S(0.499)GET(0.002)TQTHTEPTGDSK;T(0.48)S(0.48)GET(0.011)T(0.01)QT(0.018)HTEPTGDSK 197.85 3.6640999999999994e-48 70982600.0 7090.76 6603.14 6715.57 6949.17 9328.119999999999 7648.7300000000005 6931.219999999999 8021.67 8277.71 8632.96 9046.8 True False 7810.60873525838 7159.609781521848 7171.328964202989 7378.40444818985 8672.945031467005 7586.441278808349 7194.991370009116 7861.671498971622 7929.826635211936 8087.873432289826 7934.100952390249 0.9844352601671061 0.9023845076441741 0.9038615726262639 0.9299609990426214 1.093122596184533 0.9561815918819179 0.9068439402502854 0.9908711202626169 0.9994612726503026 1.0193812104008144 1.0 12.95385103891188 -6.662582996792583 0.3783653660349759 1.0012815874693097 0.9146120004031824 0.15569519255094955 0.051618354791504284 3.1581861456289912 0.6131682790812666 0.016867884532331373 0.1072648730796082 2.1747883766352009e-07 6.662582996792583 -0.08666958706612737 T(ph)SIGER ddPTM_A549_MK2206_60min_R1 1 TSIGER 6 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 T(0.942)S(0.058)IGER 125.58 0.015253000000000001 13696000.0 2062.2 2426.8 1928.7 2236.9 2934.1 2205.3 1967.2 2430.4 3217.1 3424.6 3268.9 True False 2410.248944050634 2550.3137542991194 2202.218661644549 2784.940600418258 2502.497776778766 2438.663382240334 2324.614776150752 2774.916642787839 2488.431986653038 2650.980481512004 2457.1419129496526 0.9809156448588162 1.0379187872130753 0.8962521252998841 1.1334064938378356 1.0184587888839787 0.9924796648447806 0.9460645166237835 1.1293269746299337 1.0127343372145012 1.0788878198449923 1.0 11.26276546804237 -6.215427315866516 24.999626617814425 1.017406551519737 0.9783179548170201 0.11561524475873564 0.06473225183866048 908.1944638185839 493445.7613494375 0.008083394603471815 0.02138656605152257 6.089374498592464e-07 6.215427315866516 -0.039088596702716916 T(ph)SIIEAQYLR ddPTM_A549_PD325901_60min_R1 1 TSIIEAQYLR 10 0 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 T(0.909)S(0.091)IIEAQYLR 126.71 4.8999e-06 3045100.0 1764.5 1536.1 1518.1 1493.3 1628.1 1630.2 1697.1 1302.4 2103.3 1536.5 1836.4 True False 1943.6307410437532 1665.5525379434189 1621.127395076898 1585.5377494696345 1513.7478726400843 1616.9241916910871 1761.6840691887528 1276.4226102869648 2014.905615422775 1439.485127779269 1610.534441898732 1.2068234559158628 1.0341613905380524 1.006577290682264 0.9844792562153295 0.9399040674072505 1.0039674716827676 1.0938506022335193 0.7925459878909092 1.2510788735739868 0.8937934454119434 1.0 10.653323798301278 -8.795659520768966 24.999994075707683 1.1185649488819491 1.0083284800211554 0.0 0.12840154830563524 265.53127450621946 193986.24942279293 0.021547874182156392 0.02294003500506255 1.6008125456552305e-09 8.795659520768966 -0.11023646886079375 T(ph)SISVER ddPTM_A549_PD325901_60min_R1 2 TSISVER 7 0 P30411-2;P30411 P30411-2 BDKRB2 B2 bradykinin receptor 1 T(0.582)S(0.377)IS(0.041)VER;T(0.495)S(0.495)IS(0.011)VER 104.2 0.010768999999999999 16988600.0 5589.5 6415.4 5964.9 5286.5 7826.2 6599.1 6326.6 6562.3 6526.4 8029.900000000001 7725.900000000001 True False 6156.941925227579 6956.048272848257 6369.713983857578 5613.035098487392 7276.514710924283 6545.359117524636 6567.362225048361 6431.409778475244 6252.118104167353 7522.890743608689 6775.66327851526 0.9086847548564633 1.0266224850495411 0.9400871504425413 0.8284111632709953 1.0739191739349205 0.9660100935474629 0.9692574667741543 0.9491926493555843 0.9227315241582326 1.1102810801508969 1.0 12.726146465340648 -7.3898776324333735 0.003932461052113987 1.90946954572638 1.1048111620717382e-07 0.05839490944139247 0.07279890661808766 47292.101323755756 67.82675146901501 16283.872774062165 16649.396737886003 4.074950781503149e-08 7.3898776324333735 -1.9094694352452637 T(ph)SLADSSIFDSK ddPTM_A549_MK2206_60min_R1 1 TSLADSSIFDSK 12 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;C9J0L6;C9JDV9;C9JTI2;C9J1C4;C9JDB4 Q9H8V3-2 ECT2 Protein ECT2 1 T(0.612)S(0.388)LADSSIFDSK 145.29 8.1793e-12 2913700.0 1593.5 1816.3 1552.5 1688.5 1991.3 2111.4 1811.9 1946.7 2689.0 2242.2 2192.8 True False 1862.4438426654472 1908.7419119554522 1772.6678447675429 2102.1825757996457 1698.3824078591597 2334.8269465661097 2141.098776386512 2222.650686518716 2079.94579345063 1735.6854627244702 1648.2672417987696 1.1299404583403263 1.1580293920495708 1.0754735638821613 1.2753894043938616 1.0304047576688466 1.4165342168774107 1.2989997750910287 1.3484771341406485 1.2618983989397043 1.0530364365127467 1.0 10.686734457499158 -10.716727583977436 1.0352319341107061 1.0033409911451838 1.2236144511074292 0.3083928725738706 0.11176920426130085 0.4629675526594901 0.9018623389927757 0.07166224249247263 0.01977685447540098 1.9198726244178528e-11 10.716727583977436 0.22027345996224534 T(ph)SMCSIQSAPPEPATLK ddPTM_A549_PD325901_60min_R1 1 TSMCSIQSAPPEPATLK 17 0 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;P20810-8;P20810-4;B7Z574;E7ES10;E7EVY3;E9PDE4;H0Y7F0;E7EQ12;H0Y9H6;E7EQA0;A0A0A0MR45;H0YD33;P20810-5;E9PCH5;P20810-3;P20810-2 P20810-6;P20810-5 CAST Calpastatin 1 T(0.39)S(0.39)MCS(0.186)IQS(0.033)APPEPATLK 76.15100000000001 0.00021175 4881400.0 1463.0 1582.5 1554.6 1402.6 2041.8 1692.8 1418.8 1828.5 2049.3 1546.0 1684.7 True False 1611.5226829963237 1715.8628287842328 1660.104504569228 1489.235416464281 1898.391011827605 1679.0143980460502 1472.7932103971502 1792.0291330695002 1963.175047632717 1448.3852961579903 1477.492580193201 1.0907145691287305 1.161334311783726 1.1235958317652925 1.0079478140387983 1.2848734655434724 1.1363944703035311 0.9968193614918619 1.2128853688288366 1.3287207488893154 0.9802995396217796 1.0 10.52893517002574 -6.7365013166278125 24.998653684598764 1.1568460393238473 1.1025506583237983 7.389405722790787e-05 0.11435858831024726 770.2986053609213 772165.5611308594 0.0191683397940819 0.03988758287274704 1.834419605795551e-07 6.7365013166278125 -0.05429538100004905 T(ph)SMGGTQQQFVEGVR ddPTM_A549_PD325901_60min_R1 3 TSMGGTQQQFVEGVR 15 0 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 T(0.634)S(0.366)MGGTQQQFVEGVR;T(0.988)S(0.012)MGGTQQQFVEGVR;T(0.871)S(0.129)MGGTQQQFVEGVR 160.03 1.3161e-19 48563300.0 15168.199999999999 15352.100000000002 15454.5 17613.7 16523.899999999998 16612.4 14610.8 16852.3 17476.0 16214.0 18818.8 True False 16708.06449776133 16645.875345199634 16503.33530545808 18701.65824538491 15363.318268360352 16477.114122223673 15166.82198933654 16516.16765612641 16741.544494427057 15190.245272901446 16504.206902202066 1.0123518565155691 1.0085837776899578 0.9999471894196946 1.133144922152524 0.9308728592290314 0.9983584318750404 0.9189670293889077 1.0007247094025917 1.0143804300098374 0.9203862604797262 1.0 14.010546192102543 T(ph)SNERPGSGQGQGR ddPTM_A549_MK2206_60min_R1 2 TSNERPGSGQGQGR 14 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 T(0.5)S(0.5)NERPGSGQGQGR;T(0.5)S(0.5)NERPGSGQGQGR 57.498999999999995 0.0047361 29121000.0 967.18 1013.1199999999999 663.68 1087.18 1202.23 900.3199999999999 908.8199999999999 900.91 1351.38 1454.37 1288.76 True False 1130.416338719277 1064.6834806146055 757.799803681367 1353.539148805365 1025.383559584451 995.5912648159524 1073.940830043374 1028.6167514211618 1045.2945877104175 1125.8268068961675 968.7253240334652 1.1669111054231367 1.0990561041406464 0.7822648844629444 1.3972372923726788 1.0584874103580557 1.0277332904549517 1.1086123211601662 1.0618249837201816 1.0790412532606686 1.1621734035077989 1.0 9.919943846302685 -10.710425187873533 0.4568017468689116 0.9785548181227467 1.0891841956941506 0.0 0.14354850127998872 4.77479020983392 1.3020617080194008 0.24258073704154157 0.034377764137008965 1.9479365751043635e-11 10.710425187873533 0.1106293775714039 T(ph)SNEVQYDQR ddPTM_A549_MK2206_60min_R1 1 TSNEVQYDQR 10 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 1 T(0.5)S(0.5)NEVQYDQR 125.82 1.1910999999999998e-05 4081500.0 1107.0 1046.6 822.42 917.8 1269.2 1084.0 1308.1 1197.4 1488.8 1346.8 1664.4 True False 1293.8345364484783 1099.8674696099629 939.0515226368577 1142.6610412016073 1082.5023612990735 1198.708160499035 1545.7648376793409 1367.1351168837064 1151.5891771250645 1042.556944606777 1251.0835448968776 1.034171172441665 0.8791319125699324 0.7505905792360656 0.9133371195412796 0.8652518576513613 0.9581359817164252 1.235540858949394 1.0927608491536787 0.9204734422591945 0.8333232012037305 1.0 10.288962417718142 -7.396414144069246 5.378012251316193 0.9959385621626115 0.8824553115728888 0.21347712026798327 0.11321613653629593 0.3039856265765936 12.155588759598226 0.016787210269949542 0.0269811184650878 4.014078449716513e-08 7.396414144069246 -0.11348325058972264 T(ph)SNEVQYDQR ddPTM_A549_PD325901_60min_R1 1 TSNEVQYDQR 10 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 1 T(0.705)S(0.295)NEVQYDQR 133.15 9.6617e-07 4660800.0 1541.9 1355.6 1558.2 1611.8 1061.6 1464.0 1463.0 1502.0 1515.2 1726.7 1952.3 True False 1698.4325529132138 1469.8411694786141 1663.9488222177858 1711.3572253366083 987.0368783211806 1452.0776693876533 1518.6752655843186 1472.0414317037948 1451.5214132499354 1617.6758673195347 1712.179476649366 0.9919710965330257 0.858462088539343 0.9718308418659679 0.9995197633636125 0.5764797976978169 0.8480872999536727 0.8869836873388275 0.8597471537180745 0.8477624180442094 0.9448050799471273 1.0 10.741618222674829 -10.734980877175554 0.9099454250257389 1.0027763710830653 0.8675436850458553 0.10497831520079948 0.10971631275743184 0.9003718000229934 1.2806148387231509 0.08233146947466723 0.0195351667004566 1.8408530559982824e-11 10.734980877175554 -0.13523268603720995 T(ph)SPADGKPR ddPTM_A549_MK2206_60min_R1 2 TSPADGKPR 9 1 Q12955-6;Q12955-7;Q12955-5;Q12955-4;Q12955;H0Y3A4;A0A087WZ65;A0A087WTF3;H0Y951;A0A087WX55;A0A087WY90 Q12955-6 ANK3 Ankyrin-3 1 T(0.5)S(0.5)PADGKPR;T(0.5)S(0.5)PADGKPR 75.229 0.00082738 25394000.0 6399.0 6010.700000000001 5586.1 4406.1 5433.4 4445.7 4162.5 3440.3 5277.2 7942.9 8790.4 True False 7478.994759470477 6316.618956224541 6378.292977556182 5485.594697797343 4634.154057581455 4916.141023183174 4918.772369727279 3927.9730604768793 4081.9226259567354 6148.593373416374 6607.501077302038 1.1318945955472 0.9559769846914244 0.9653109251040115 0.8302071590485779 0.7013474539566271 0.7440242484516587 0.7444224847157652 0.5944718002347632 0.6177710117942892 0.9305474643867868 1.0 12.68988903974924 -5.8606253827348205 1.2696180748057275 0.779866058326974 1.1105403326530874 0.48558835654970345 0.11754196294406179 0.5827372621822886 1.4528038998596378 0.023425644529175695 0.18847120728518285 1.3783979459442692e-06 5.8606253827348205 0.3306742743261134 T(ph)SPAKQQAPPVR ddPTM_A549_MK2206_60min_R1 2 TSPAKQQAPPVR 12 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.88)S(0.12)PAKQQAPPVR;T(0.901)S(0.099)PAKQQAPPVR 154.09 4.0842e-13 465994000.0 11008.0 14683.9 13501.2 12237.400000000001 18117.4 11603.2 11672.3 9884.3 20990.2 21317.1 23196.0 True False 12865.881280239251 15431.247789992107 15415.873176022904 15235.56354935776 15452.354459974666 12831.042922419194 13793.005821301549 11285.429794399213 16235.953214461668 16501.552304631066 17435.793022968006 0.7379005510842637 0.8850327466989697 0.8841509620879142 0.8738096127482182 0.8862432835500756 0.7359024568321603 0.7910741887754776 0.6472564671726158 0.9311852459520596 0.9464182261680744 1.0 14.089764362493137 -8.97200850300865 17.622575976342265 0.9696445067461961 0.8112102517027892 0.46679271153173885 0.07392351340956856 4.505057251728322 2836.4466454805265 0.013544771762687055 0.014156371008352138 1.066575238654861e-09 8.97200850300865 -0.1584342550434069 T(ph)SPAKQQAPPVR ddPTM_A549_PD325901_60min_R1 3 TSPAKQQAPPVR 12 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.98)S(0.02)PAKQQAPPVR;T(0.708)S(0.292)PAKQQAPPVR;T(0.975)S(0.025)PAKQQAPPVR 133.48 3.6854e-08 969455000.0 16449.3 17155.9 19108.7 20813.6 20583.0 27902.300000000003 24029.4 24148.4 25036.9 22424.8 24557.2 True False 18119.22082666537 18601.687901636287 20405.531291947773 22099.208800884746 19137.321087495166 27675.072919778067 24943.851966392223 23666.74121794668 23984.68616116507 21008.894300959677 21536.820080916776 0.8413136553395061 0.8637156196572755 0.9474718744587829 1.0261128949331888 0.8885861986864186 1.2850120312933404 1.1581956794306105 1.098896732620113 1.113659587211637 0.9754872920898439 1.0 14.394517630724074 -6.199110144655822 1.0992486505202952 1.0763071017987091 0.8363164643499984 0.4681648494352262 0.0947251144888115 0.4426857580352201 0.8938544839750664 0.014821510923023825 0.08278657865576798 6.32251481037041e-07 6.199110144655822 -0.23999063744871074 T(ph)SPAPWK ddPTM_A549_MK2206_60min_R1 1 TSPAPWK 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.928)S(0.072)PAPWK 103.56 0.01096 7724800.0 3210.6 3153.8 2368.9 2158.4 4073.1 3381.7 2948.2 3083.1 4185.7 3727.7 4105.7 True False 3752.4707883662904 3314.3149490310548 2704.8456408823404 2687.2080968942573 3473.9523856029446 3739.549249409215 3483.8497778810706 3520.1388665977565 3237.6456331894024 2885.6099809999123 3086.1413784445476 1.2159102024864399 1.0739349053093314 0.8764490375504492 0.8707339578359312 1.1256621002093747 1.211723246228594 1.1288691445616703 1.140627869865103 1.0490918062934675 0.9350219666392259 1.0 11.591588439023376 -5.299653944555516 4.446316313126934 1.0387407417646897 1.2228368982812376 0.18799249522476102 0.1058694002524725 0.2340183442037185 10.065379166048569 0.01474327610725315 0.12064752944694564 5.015867498457221e-06 5.299653944555516 0.18409615651654798 T(ph)SPAPWK ddPTM_A549_PD325901_60min_R1 1 TSPAPWK 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.99)S(0.01)PAPWK 93.429 0.012875999999999999 13405000.0 3136.5 2604.5 2329.1 2178.2 3309.1 2545.8 2003.2 2173.1 3563.3 3618.6 3367.8 True False 3454.915171030736 2823.990355493545 2487.1667320160727 2312.7424669488782 3076.6802317752613 2525.0678488573 2079.4328721931015 2129.75581573603 3413.5468927095403 3390.1209784458597 2953.5819502431673 1.1697373660975596 0.9561239210786235 0.8420848901149688 0.7830297265862121 1.0416776252041895 0.8549171451462222 0.7040376421659479 0.721075579284566 1.155731227443513 1.1477998699737288 1.0 11.528249926272009 -8.776011718179683 24.99995733377686 1.0735397471580561 0.8799974047390705 0.33283812452843875 0.13526078762958665 224.3529918934805 384893.2514455825 0.02463875267472086 0.02628567419938558 1.6748976831501564e-09 8.776011718179683 -0.1935423424189856 T(ph)SPDPR ddPTM_A549_MK2206_60min_R1 2 TSPDPR 6 0 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 T(0.814)S(0.186)PDPR;T(0.601)S(0.399)PDPR 84.09700000000001 0.043137 306090000.0 2500.3 1939.29 1932.8200000000002 2027.48 2394.2 1882.5900000000001 1758.63 2468.1 2470.7 2692.8 3041.7 True False 2922.2895135339945 2037.991577622689 2206.922939596523 2524.2126910170346 2042.0163515775623 2081.804424237897 2078.1503069245623 2817.9607332392475 1911.090394897164 2084.494609769177 2286.361943350655 1.27813950106753 0.8913687456833802 0.9652552807812597 1.1040302251172927 0.8931290854959713 0.9105314363250029 0.9089332128573836 1.232508589217303 0.8358652051811482 0.9117080590986208 1.0 11.158838092651674 -5.255070374557173 24.449821963701112 0.9496442374760425 1.2781397024934167 0.3980636985485001 0.10904073838723861 398.024547825353 1527909.4299055687 0.015105229285451036 0.19387202090231082 5.558141839490854e-06 5.255070374557173 0.32849546501737414 T(ph)SPDPR ddPTM_A549_PD325901_60min_R1 1 TSPDPR 6 0 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 T(0.647)S(0.353)PDPR 86.87200000000001 0.041424 182870000.0 1563.6 1885.9 1624.3 1604.0 2029.8 1766.7 1809.1 1868.0 1482.2 1632.1 2083.3 True False 1722.3355209385181 2044.8314115666253 1734.5347657093769 1703.075437051693 1887.233850429852 1752.3125809475189 1877.9462904775048 1830.7412745823483 1419.9082884893435 1529.048927464071 1827.0673071267852 0.9426776529908104 1.1191877844841371 0.9493546072131719 0.9321361235070865 1.032930666028765 0.9590848536954972 1.0278473503150418 1.0020108550140612 0.7771516040765171 0.8368870273688096 1.0 10.835314066886609 -8.641886385112297 22.166609637241777 0.8944822851740628 0.9972218958666983 0.36307116309288734 0.07153422345590033 3.976464102695256 738.8063267849956 0.015227643728465723 0.017266521559627095 2.2809387056464488e-09 8.641886385112297 0.10273961069263549 T(ph)SPDSLR ddPTM_A549_MK2206_60min_R1 2 TSPDSLR 7 0 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 T(0.853)S(0.147)PDSLR;T(0.873)S(0.127)PDSLR 137.9 0.005831800000000001 27762000.0 2874.3 3211.7 2619.6 2549.6 3605.6000000000004 3320.1000000000004 3067.0 4000.6 4079.7 3849.5 4249.2 True False 3359.411570111889 3375.161811720159 2991.098670629986 3174.252114455894 3075.221016309438 3671.4307782959845 3624.2342001089646 4567.697301323666 3155.654463942184 2979.895276406139 3194.0063680460303 1.0517861215683948 1.0567173082328427 0.9364723566471236 0.9938152115826178 0.9628099201914676 1.1494750965515526 1.134698489134864 1.4300839682163835 0.9879925398748317 0.932964726125178 1.0 11.641151473785456 -4.164972682540408 2.1985329368546624 1.0374753021642351 2.2339470253647646 0.0 0.1378245659557476 2171.495946143719 172.19871652110368 0.019670443900899223 12581.70082827918 6.839546672072149e-05 4.164972682540408 1.1964717232005295 T(ph)SPDSLR ddPTM_A549_PD325901_60min_R1 2 TSPDSLR 7 0 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 T(0.926)S(0.074)PDSLR;T(0.5)S(0.5)PDSLR 126.52 0.0062191 31822000.0 3657.3999999999996 3070.6 3125.7 3276.5 3680.3 2841.3 2878.2 2748.3 2971.7 3472.0 3737.8 True False 4028.6965555644256 3329.370238271635 3337.828798361015 3478.8819635286013 3421.8084243457415 2818.1613948300114 2987.731476011471 2693.4830005003582 2846.8097833651195 3252.7773274647716 3278.0742958664123 1.228982686769648 1.015648193962506 1.0182285381908371 1.06125781466131 1.0438471234958204 0.8597002814681955 0.9114288470456395 0.8216662459105297 0.8684396772077103 0.9922829789326192 1.0 11.67863283741043 -7.133813539709231 5.354349355101465 0.9198194907197573 1.0695783859652939 0.5560867489233057 0.07312070504947579 0.16537170345288696 6.574300094790438 0.011738669728664984 0.020579207420416377 7.348292925525345e-08 7.133813539709231 0.14975889524553654 T(ph)SPDSLRR ddPTM_A549_MK2206_60min_R1 4 TSPDSLRR 8 1 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 T(0.921)S(0.079)PDSLRR;T(0.865)S(0.135)PDSLRR;T(0.903)S(0.097)PDSLRR;T(0.982)S(0.018)PDSLRR 107.21 0.0011401 54175900.0 7212.200000000001 8156.5 7191.0 7158.1 8826.3 6854.7 7090.5 6335.9 9723.4 9932.6 10799.1 True False 8429.443038639314 8571.631010771698 8210.791930256617 8911.834821339326 7527.962962128906 7580.059804218399 8378.752069081389 7234.033227879969 7521.065425079156 7688.818761509709 8117.385430002326 1.0384431183326106 1.0559595924927323 1.0115069687228422 1.0978701083233857 0.9273876455718265 0.9338055793435729 1.0321983773387224 0.8911777431613095 0.9265379215924456 0.9472038537299695 1.0 12.986799401902562 -6.768303573319586 24.999937549714 0.9593956204799489 1.048486139690605 0.5734523130682937 0.04098029448873496 103.3348250785807 376354.6876257342 0.006337602416932584 0.012167124036529345 1.70489024831574e-07 6.768303573319586 0.08909051921065603 T(ph)SPDSLRR ddPTM_A549_PD325901_60min_R1 2 TSPDSLRR 8 1 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 T(0.882)S(0.116)PDS(0.002)LRR;T(0.5)S(0.5)PDSLRR 89.04700000000001 0.0039368 45864000.0 5469.400000000001 6450.8 5543.0 6423.1 7222.799999999999 6457.5 6164.5 6913.1 6384.0 7289.0 8159.299999999999 True False 6024.64946164053 6994.431555084572 5919.181312766779 6819.8402990815075 6715.495445307294 6404.912260977304 6399.0934208438375 6775.212797277968 6115.702680958013 6828.77129605148 7155.757826064217 0.8419303179456794 0.9774550404162606 0.8271913970043373 0.9530563309787876 0.9384743878344645 0.8950711324589515 0.8942579635011828 0.9468197445978193 0.8546547870418567 0.9543044163929476 1.0 12.804888847422472 -10.995725163885119 1.253885977655379 1.0003540938569349 0.901077549849023 0.2482190606495258 0.04761304584390284 0.3674687908012543 1.0221246406095885 0.03128685313320732 0.007037578536855844 1.0098917772890598e-11 10.995725163885119 -0.09927654400791186 T(ph)SPDTLR ddPTM_A549_MK2206_60min_R1 1 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.994)S(0.006)PDTLR 197.5 3.6938e-14 510010000.0 4063.9 4266.7 3577.5 3322.5 5024.8 5074.8 3748.9 4972.4 5339.2 4731.1 4160.0 True False 4749.786967184254 4483.856805450823 4084.8432944643387 4136.512649152694 4285.658576312312 5611.811967620396 4430.026603452397 5677.252927336345 4129.879724950392 3662.3412241083465 3126.9571898407885 1.5189804908797273 1.4339361024891812 1.3063316977078032 1.3228555423118242 1.3705523664462191 1.7946558353445594 1.4167212195437684 1.8155838352316576 1.3207343350807654 1.171215658470469 1.0 11.6105437525892 -9.72513722240565 1.0422666509035232 1.0548722004744189 1.4813933417120189 0.4334289723592636 0.17251251328064038 0.2637965963853112 0.5905314278410873 0.053408404148361344 0.034429656821378454 1.8830540139380057e-10 9.72513722240565 0.4265211412376 T(ph)SPDTLR ddPTM_A549_PD325901_60min_R1 2 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.873)S(0.127)PDTLR;T(0.5)S(0.5)PDTLR 158.61 0.0015115 1530600000.0 5316.3 5480.6 5497.1 4982.8 5959.5 5065.6 4960.6 5334.3 5704.6 6429.9 5607.8 True False 5856.006862346788 5942.469396167376 5870.166262747657 5290.5762392401375 5540.925279158884 5024.347433094327 5149.378347544479 5227.903201822601 5464.855500280876 6023.915016666402 4918.076150773099 1.190710896460245 1.2082914566569383 1.1935899491562152 1.0757410168218895 1.1266448727695841 1.0216083035445727 1.0470310319890066 1.0629976115763882 1.111177487445335 1.2248519201394372 1.0 12.263878358248412 -2.0000000000026303 0.21501760076404636 1.0287235849480612 2.0450471611618664 0.18950096867497823 0.0684777287690451 23.006545912704578 0.264502227083846 0.030705990098346295 8.16777754154967 0.009999999999939434 2.0000000000026303 1.0163235762138052 T(ph)SPDTLRR ddPTM_A549_MK2206_60min_R1 7 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.904)S(0.096)PDTLRR;T(0.925)S(0.075)PDTLRR;T(0.988)S(0.012)PDTLRR;T(0.824)S(0.176)PDTLRR;T(0.5)S(0.5)PDTLRR;T(0.499)S(0.499)PDT(0.001)LRR;T(0.499)S(0.499)PDT(0.003)LRR 141.25 0.00065674 2860910000.0 24738.95 25639.79 23839.75 24404.829999999998 34460.72 26958.3 24759.73 24700.170000000002 35714.9 36747.5 37744.4 True False 28914.279950742628 26944.745794602375 27220.585025634162 30384.014445574456 29391.593737839754 29811.009412528736 29258.25244586368 28201.49473859815 27625.53217497579 28446.214227752847 28371.423787554475 1.019133906259096 0.9497142616586647 0.9594366933948114 1.0709372456275117 1.035957657885777 1.050740690201306 1.0312578129652494 0.994010556176921 0.973709757460044 1.0026361186790766 1.0 14.792150931984144 T(ph)SPDTLRR ddPTM_A549_PD325901_60min_R1 7 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.61)S(0.39)PDTLRR;T(0.811)S(0.189)PDTLRR;T(0.902)S(0.097)PDT(0.001)LRR;T(0.9)S(0.098)PDT(0.001)LRR;T(0.5)S(0.5)PDTLRR;T(0.499)S(0.499)PDT(0.001)LRR;T(0.488)S(0.488)PDT(0.023)LRR 105.2 0.0012368000000000001 1730658600.0 23558.2 22435.099999999995 24198.100000000002 22973.600000000002 26548.8 23446.099999999995 23967.500000000004 24796.3 25798.7 25874.699999999997 29561.899999999994 True False 25949.811121369774 24325.7846129903 25840.328580996164 24392.627095168817 24684.103876387857 23255.162735129667 24879.59632801923 24301.718344178953 24714.470356395927 24240.96702619606 25925.973708323956 1.0009194413800615 0.9382785343634023 0.9966965511771582 0.9408567396385643 0.9520993947649736 0.896983195183262 0.9596398040020858 0.9373502657057965 0.9532706711208668 0.9350070049023117 1.0 14.66211055326646 -10.447768183995596 0.8398574742788883 0.9993052999596151 0.9517023939766088 0.0 0.03290820457188609 0.569172456188158 0.7392229045275023 0.016015461680746086 0.004973300410163685 3.566414493020633e-11 10.447768183995596 -0.047602905983006316 T(ph)SPEAR ddPTM_A549_PD325901_60min_R1 1 TSPEAR 6 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 T(0.5)S(0.5)PEAR 88.029 0.040901 2117500.0 626.38 468.36 375.11 429.4 244.1 269.58 237.04 318.9 423.78 481.36 433.55 True False 689.9696364834157 507.8303409095629 400.5672203196726 455.92306276184377 226.95525809928424 267.384629858964 246.06068691326507 312.53928932778956 405.9700003346471 450.96684745058826 380.22609849988845 1.8146298720828553 1.335600956675813 1.0534974371828663 1.1990840832878218 0.5968955287253929 0.7032253464816867 0.6471430758805139 0.8219827375365746 1.067706824797999 1.1860491671397475 1.0 8.570713750914589 -5.253946341532576 1.2272601351821792 0.9443986513530138 2.229659137250988 0.6663326600862425 0.19458414117876485 0.7593390364113101 0.9284780368097796 0.030341890447978297 1.2401183637948694 5.572545952600793e-06 5.253946341532576 1.2852604858979744 T(ph)SPENVQDR ddPTM_A549_MK2206_60min_R1 1 TSPENVQDR 9 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 T(0.5)S(0.5)PENVQDR 208.04 5.523e-23 45888000.0 3358.1 3600.6 3389.8 2872.8 4964.8 4028.0 3420.3 4093.3 5047.1 4928.4 5317.2 True False 3924.86518233752 3783.855160593956 3870.524612040591 3576.6361289648917 4234.484496830793 4454.240286429995 4041.724236919691 4673.537810205509 3903.9399085625446 3815.0710170775446 3996.79249274554 0.9820037416156647 0.9467229453272642 0.9684076966882483 0.8948766130482726 1.059470689188063 1.1144537262103935 1.0112419507031465 1.1693221048348919 0.9767682249324854 0.9545331722880703 1.0 11.964626956880485 -6.768148380146144 24.995824239231617 1.0180829067423989 0.9493688299016227 0.2919261002049406 0.06353007395705809 201.6461342892172 751278.6576886945 0.009637533455149038 0.018512200135751184 1.7054995920196303e-07 6.768148380146144 -0.06871407684077613 T(ph)SPGGRTS(ph)PEAR ddPTM_A549_MK2206_60min_R1 1 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 T(0.751)S(0.257)PGGRT(0.282)S(0.711)PEAR 46.873000000000005 0.019504 187690000.0 868.89 945.38 827.16 885.3 1094.0 716.42 731.34 876.02 1303.0 1558.7 1380.9 True False 1015.537389679059 993.495803955539 944.463725911704 1102.1985397426272 933.0740492130374 792.2310888788923 864.2150113817054 1000.198517698734 1007.8725804634328 1206.5885874358362 1037.984419098833 0.9783744061984453 0.957139419123537 0.9099016406543725 1.0618642432990892 0.8989287623634296 0.76323986593816 0.8325895798436046 0.9635968510655445 0.9709900860924838 1.1624341996225565 1.0 10.019569072618426 -8.507162855277693 22.808966178610508 0.9853005024974335 0.9140490715788773 0.21892035904522 0.09008377507662578 321.9027959330414 467188.2258351405 0.01285110312000877 0.015282486606152513 3.1105496991523174e-09 8.507162855277693 -0.07125143091855624 T(ph)SPGGRTSPEAR ddPTM_A549_MK2206_60min_R1 1 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 T(0.493)S(0.493)PGGRT(0.009)S(0.005)PEAR 55.656000000000006 0.007134000000000001 4534100.0 563.46 742.58 664.45 559.66 757.73 395.86 521.79 376.06 695.74 832.05 974.47 True False 658.5582727256183 780.3741501843747 758.6790012597708 696.7767251240924 646.2689207588617 437.7496424493991 616.59248884084 429.3676566354491 538.1560008684792 644.0893271161783 732.4822049961908 0.8990775041818839 1.065383083522736 1.0357644132306478 0.9512541333720399 0.882299824283407 0.597624951792072 0.8417849398048469 0.5861816897486022 0.7347018087235003 0.8793241975339562 1.0 9.516649900742246 -6.745792890160343 3.1996040037237266 0.8252846572427062 1.003053252924928 0.35934525642178994 0.12381850752035495 0.29525390340335617 6.256659194037342 0.022147621359742617 0.047070214514331826 1.7955897179287117e-07 6.745792890160343 0.17776859568222192 T(ph)SPGGRTSPEAR ddPTM_A549_PD325901_60min_R1 2 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 T(0.499)S(0.499)PGGRT(0.001)SPEAR;T(0.497)S(0.497)PGGRT(0.005)S(0.001)PEAR 57.328 0.0057309 10374600.0 1530.43 1736.38 1270.33 1467.73 1351.69 1216.67 1355.06 1700.33 1617.69 1517.3600000000001 2041.55 True False 1685.7981269569818 1882.7108364261405 1356.5422329148512 1558.3883486433187 1256.751957477352 1206.7618429056529 1406.627549817284 1666.4155842669188 1549.7041149685112 1421.5536306457225 1790.4522924517294 0.9415487550626435 1.0515280660441828 0.7576533810109456 0.8703880886484625 0.7019187066729589 0.6739983232131762 0.7856269366949394 0.9307232542817644 0.8655377870171826 0.793963422895306 1.0 10.80610836246028 -10.080326027086029 0.6809009275229139 0.9957169918986543 0.833925670929994 0.0 0.11990035718286679 0.8157167675955798 0.7401016103962665 0.06549989098285137 0.024465613159391726 8.311395961058791e-11 10.080326027086029 -0.16179132096866022 T(ph)SPGMAQK ddPTM_A549_PD325901_60min_R1 1 TSPGMAQK 8 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 T(0.5)S(0.5)PGMAQK 51.346000000000004 0.013886 8746400.0 1474.2 1849.2 1747.1 1471.3 1805.2 1645.6 1756.6 1704.1 1758.5 1953.2 1859.0 True False 1623.8596987513195 2005.0385737679637 1865.6687121657646 1562.17885943526 1678.4089796019173 1632.1987791969416 1823.4483742484022 1670.110388659411 1684.5963603484752 1829.8746186648018 1630.3547851719366 0.9960161515274529 1.229817333014736 1.1443329569330591 0.958183380478448 1.0294746854286154 1.0011310384965137 1.1184365457338796 1.0243846332399864 1.0332697984940857 1.122378169038725 1.0 10.670970231395756 -6.243738352313178 24.56220834473239 1.02084132357825 1.134031684571106 0.2148102101860293 0.0695140846964001 476.0975358745534 660638.6060501696 0.007939957193840634 0.020951549857058483 5.70507880401021e-07 6.243738352313178 0.11319036099285595 T(ph)SPGPTHR ddPTM_A549_PD325901_60min_R1 1 TSPGPTHR 8 0 Q14678;Q14678-2;Q5W0W3 Q14678 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 T(0.5)S(0.5)PGPTHR 79.148 0.0036936 1678100.0 130.31 0.0 96.587 0.0 186.69 144.88 176.11 118.12 0.0 178.16 302.41 True False 143.5389752708482 0.0 103.1419746448141 0.0 173.57753844553616 143.70014531481087 182.81196242108976 115.7640039366526 0.0 166.91094719502416 265.21548713493553 0.5412164154569861 0.0 0.38889876213125457 0.0 0.6544773848641197 0.5418241101497197 0.6892959547572697 0.4364903618081494 0.0 0.6293408767267943 1.0 8.051021213190518 -11.005901433448507 1.2794699094375375 1.0009556248019926 0.3276851505042747 0.26261817686464917 0.2667506610162892 0.32347091519941423 0.9405492506846096 0.18910130241030246 0.04273553162250088 9.865033549280889e-12 11.005901433448507 -0.6732704742977179 T(ph)SPHWK ddPTM_A549_MK2206_60min_R1 1 TSPHWK 6 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 T(0.5)S(0.5)PHWK 79.146 0.038832 28958000.0 1069.3 987.48 554.46 404.1 1009.6 1168.6 782.26 1003.4 1123.9 968.93 1193.0 True False 1249.7716981249841 1037.7385141318998 633.0907653525358 503.1045181407382 861.0891774090325 1292.260476346101 924.3865162625492 1145.6350227836238 869.3384444995027 750.0480400488896 896.7451748750144 1.393675408734899 1.1572278761093269 0.7059873675269833 0.5610339840533397 0.9602384284131201 1.4410565147743475 1.0308240759604728 1.2775480201979328 0.9694375491015811 0.8364115704926195 1.0 9.808554267255973 -4.350305284611368 16.73846550180788 1.0171554018891598 12.631817011771801 0.0 0.26153782699849953 0.0 0.0 0.033365092181595064 0.0 4.4636970902544055e-05 4.350305284611368 11.614661609882642 T(ph)SPINEDIR ddPTM_A549_MK2206_60min_R1 2 TSPINEDIR 9 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 T(0.774)S(0.226)PINEDIR;T(0.818)S(0.182)PINEDIR 138.76 4.5148e-05 45649000.0 1874.0 1436.4699999999998 1607.64 1562.35 2109.2 2025.77 1545.88 1870.35 2494.2 1965.17 2250.04 True False 2190.285385098869 1509.580187340553 1835.6275259015094 1945.1258201365574 1798.9394740403457 2240.1356368027054 1826.746385805167 2135.477840206648 1929.2676824189518 1521.2367321301608 1691.2929700551365 1.2950360605043285 0.8925598427168655 1.0853397716432698 1.1500821292204306 1.0636474613748912 1.3245107006680674 1.0800886766209492 1.2626303532362173 1.1407057893441472 0.8994519335586005 1.0 10.723910873349004 -10.503258883626179 0.9679151126601593 1.0050938413124328 1.1378711093928908 0.251662161499313 0.12050025574135194 0.721285901525378 1.2731615376856222 0.060207661625661345 0.02003186981166871 3.13863718954539e-11 10.503258883626179 0.13277726808045798 T(ph)SPINEDIR ddPTM_A549_PD325901_60min_R1 2 TSPINEDIR 9 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 T(0.911)S(0.089)PINEDIR;T(0.961)S(0.039)PINEDIR 215.04 2.5875999999999998e-23 53010000.0 7428.2 8767.2 8221.8 7892.9 8930.900000000001 7218.2 6979.0 7438.4 7674.4 8858.400000000001 7891.4 True False 8182.305395648184 9506.042712491075 8779.780789699775 8380.426506923508 8303.624393932392 7159.417372386585 7244.589664055334 7290.035276688087 7351.871656444895 8299.079112215995 6920.807827706196 1.1822760578457057 1.373545249217203 1.2686063546731523 1.2109029343906927 1.199805658624177 1.0344771232810654 1.0467838212546425 1.0533503397542345 1.0622851897451933 1.1991489026746474 1.0 12.756724730183734 -7.034896937176977 1.4554279999410722 1.031533784388028 1.280089963064527 0.6154670354679574 0.06925165478378542 0.10897158651846527 0.45646931050538686 0.007310779166851821 0.016186395050643444 9.227903894088867e-08 7.034896937176977 0.24855617867649915 T(ph)SPITR ddPTM_A549_MK2206_60min_R1 1 TSPITR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.674)S(0.326)PITR 81.89 0.044512 98038000.0 3108.7 2832.6 2308.3 1986.7 3534.9 2576.8 2356.5 2634.1 3275.6 3999.0 4079.6 True False 3633.3725595821015 2976.76724098718 2635.65164964697 2473.4415891863514 3014.920892653715 2849.475265658594 2784.6455469699285 3007.491741592925 2533.681830058342 3095.6231225738784 3066.5227287679045 1.1848510123523366 0.9707305323587843 0.8594919662330193 0.8065948985090854 0.983172524491634 0.9292203312001805 0.908079213255585 0.9807498615219142 0.8262393773537585 1.0094897042611082 1.0 11.5823879287955 -5.295142957115665 3.317287129920623 0.9146794461459078 1.2116612360608825 0.5594719278333224 0.06634982707221555 0.16734902521264508 3.035302227613759 0.009968054222029867 0.12015598158708639 5.068238491391664e-06 5.295142957115665 0.2969817899149747 T(ph)SPITR ddPTM_A549_PD325901_60min_R1 1 TSPITR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.908)S(0.092)PITR 106.14 0.029518 164210000.0 3062.2 3293.1 3384.4 3515.1 3751.3 3158.9 2788.1 3748.7 3527.2 3947.4 3761.9 True False 3373.0722897275045 3570.621094135457 3614.0857360504933 3732.2197436286815 3487.8216292824477 3133.174965729958 2894.2026712068605 3673.9292377017414 3378.964050168406 3698.1604903325015 3299.2101486489005 1.0223878254947938 1.082265431196526 1.095439688050954 1.131246442472635 1.0571686773910984 0.949674262796828 0.8772410791692371 1.1135784239771136 1.0241736348780834 1.1209229857173482 1.0 11.687904960339294 -7.0114111372014305 23.833537046150372 1.0050853799236363 1.0850086553616112 0.17663869058796655 0.06820390834270233 294.32143781769753 614728.9438937086 0.008559946307697705 0.015410088641224768 9.740670728507386e-08 7.0114111372014305 0.07992327543797484 T(ph)SPKGVENPAVQESNQK ddPTM_A549_MK2206_60min_R1 1 TSPKGVENPAVQESNQK 17 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 T(0.5)S(0.5)PKGVENPAVQESNQK 120.41 3.5345e-10 4882000.0 3368.8 3921.0 2687.0 2833.9 4134.6 2987.1 2742.7 3180.6 5393.4 5022.3 5656.0 True False 3937.371080747638 4120.562152054905 3068.0570041161905 3528.2056272186037 3526.4058170714998 3303.1929393234946 3241.013087916157 3631.459790178984 4171.803511490008 3887.758941861166 4251.459102341228 0.9261222996545763 0.969211287904842 0.7216480107797928 0.8298811166443217 0.8294577772439468 0.776955125242641 0.7623295931816373 0.8541678757251087 0.9812639404652029 0.9144528615411645 1.0 12.053742344370145 -8.737818080460753 4.069544417416327 0.9920045487535183 0.8284686279720807 0.40080905713658965 0.07002111022160999 0.11844998492125719 4.297507643654561 0.011810996483858468 0.013037807829512502 1.8288661407085295e-09 8.737818080460753 -0.16353592078143764 T(ph)SPKPAVVETVTTAK ddPTM_A549_MK2206_60min_R1 1 TSPKPAVVETVTTAK 15 1 P56192;H0YI94;H0YIP0 P56192 MARS Methionine--tRNA ligase, cytoplasmic 1 T(0.5)S(0.5)PKPAVVETVTTAK 95.666 7.534299999999999e-06 6904400.0 1346.4 1445.6 1624.7 1413.9 1889.5 1374.3 1579.1 1671.4 2426.7 2212.5 1905.9 True False 1573.6394036804252 1519.1748653431712 1855.106890430806 1760.3055634723826 1611.5570530055138 1519.7275138134921 1866.0020297985225 1908.3260684478255 1877.0563246436022 1712.694713352015 1432.6124298359512 1.0984404231789495 1.0604227868643665 1.294911904850103 1.2287381617050157 1.1249079091056424 1.0608085495862385 1.3025169898967015 1.3320602479111174 1.3102331695241152 1.1955045744983073 1.0 10.484432649195327 -10.979800499636815 1.2892976483971745 1.0015322918399756 1.2121794368168421 0.010196721509666329 0.11281124726409275 0.40602499284397786 1.2147170313320665 0.07338799664591587 0.01741687515069701 1.0476096743905381e-11 10.979800499636815 0.21064714497686654 T(ph)SPKPAVVETVTTAK ddPTM_A549_PD325901_60min_R1 1 TSPKPAVVETVTTAK 15 1 P56192;H0YI94;H0YIP0 P56192 MARS Methionine--tRNA ligase, cytoplasmic 1 T(0.5)S(0.5)PKPAVVETVTTAK 113.33 5.3184e-07 12615000.0 6122.1 7018.2 6822.5 7465.1 8177.2 7695.4 6758.1 8145.6 7381.5 7786.4 7439.1 True False 6743.611085148183 7609.648344375041 7285.515877025317 7926.202272527805 7602.86168180855 7632.731213801737 7015.28319367422 7983.129617900418 7071.281224857708 7294.765375164666 6524.137860340263 1.0336401880993473 1.1663837440703873 1.1167017057247386 1.2149041669874245 1.165343505082222 1.1699218160610199 1.0752812622675545 1.2236298172712223 1.0838644701001015 1.1181194406557515 1.0 12.6715715523538 -9.527815752507752 0.8928768154283513 1.013656777743831 1.147370471418602 0.13674251700515927 0.06352180192911715 0.2851485080654836 0.48157876819389966 0.016427610738217514 0.011152942245868594 2.9660894728350366e-10 9.527815752507752 0.13371369367477093 T(ph)SPKPAVVETVTTAKPQQIQALMDEVTK ddPTM_A549_MK2206_60min_R1 4 TSPKPAVVETVTTAKPQQIQALMDEVTK 28 2 P56192;H0YI94;H0YIP0 P56192 MARS Methionine--tRNA ligase, cytoplasmic 1 T(0.499)S(0.499)PKPAVVET(0.001)VTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK 210.48 6.685799999999998e-90 81035000.0 7288.5 6974.8 7666.7 7329.2 10763.0 7461.030000000001 6815.870000000001 6944.49 9349.9 9635.199999999999 10424.599999999999 True False 8518.62061328341 7329.787528220495 8753.953343303909 9124.854329020285 9179.776957659886 8250.551242369114 8054.225352949689 7928.892724108679 7232.162578722215 7458.6016280629765 7835.884115676513 1.0871294786303707 0.9354129566000704 1.1171621752025023 1.1644958238681773 1.1715049408776699 1.0529189968318975 1.027864275945118 1.011869574263623 0.9229542540392488 0.9518519567104441 1.0 12.93588034651273 -8.060861710057228 1.7439285911005866 0.964809851454079 1.0904097619213629 0.44659508108155466 0.06186750646845832 0.26333322913441803 1.5903855683524228 0.011637424810211352 0.01612597288930149 8.692371715138986e-09 8.060861710057228 0.1255999104672838 T(ph)SPKPAVVETVTTAKPQQIQALMDEVTK ddPTM_A549_PD325901_60min_R1 4 TSPKPAVVETVTTAKPQQIQALMDEVTK 28 2 P56192;H0YI94;H0YIP0 P56192 MARS Methionine--tRNA ligase, cytoplasmic 1 T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.498)S(0.498)PKPAVVET(0.001)VT(0.001)T(0.001)AKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK 200.11 1.9426999999999997e-77 119904700.0 9363.9 9253.8 10534.6 11165.8 11923.900000000001 11911.8 11431.8 12281.7 11426.3 11923.600000000002 12166.3 True False 10314.516234661154 10033.65020221392 11249.54130569599 11855.48610662831 11086.40639922186 11814.794250144696 11866.843404720987 12036.731858692734 10946.092347028603 11170.7418611057 10669.922228530037 0.9666908543233266 0.940367697843682 1.0543227087087967 1.1111127009837265 1.039033477636622 1.1072990034129222 1.1121771228088742 1.1280993057763833 1.0258830488717268 1.046937514805547 1.0 13.38126204016137 -5.762403868991155 24.99839187656619 1.0436624934507752 0.9535292550845266 0.40889714576613934 0.0458631762236696 23.606291883002704 611935.2984162892 0.007876910828959766 0.026748298085815688 1.728208476822544e-06 5.762403868991155 -0.09013323836624865 T(ph)SPLKDNPS(ph)PEPQLDDIKR ddPTM_A549_PD325901_60min_R1 2 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 2 T(0.938)S(0.062)PLKDNPS(1)PEPQLDDIKR;T(0.948)S(0.052)PLKDNPS(1)PEPQLDDIKR 134.63 4.8858999999999996e-17 147842000.0 11302.2 11919.4 10790.099999999999 11655.7 13067.7 11805.7 12312.1 13404.6 12312.8 13544.5 12844.400000000001 True False 12449.591023760111 12923.889669137941 11522.38107214231 12375.646116984672 12149.86983311764 11709.558293367367 12780.643702939637 13137.234737294724 11795.335834915388 12689.297958481167 11264.620227360092 1.105194029845933 1.1472991905885765 1.0228823377601453 1.0986296801134994 1.0785867244425522 1.039498718734129 1.1345827418040555 1.166238583470957 1.0471134931177055 1.1264736584426294 1.0 13.459511055276366 -9.074219859370318 3.2584764248585114 1.018351395780419 1.0969771851152104 0.0 0.052741283300508285 0.16491584569669704 3.6496726713700838 0.008051812474446167 0.007952005688431964 8.429079318851995e-10 9.074219859370318 0.07862578933479125 T(ph)SPLKDNPSPEPQLDDIKR ddPTM_A549_MK2206_60min_R1 4 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 1 T(0.5)S(0.5)PLKDNPSPEPQLDDIKR;T(0.5)S(0.5)PLKDNPSPEPQLDDIKR;T(0.5)S(0.5)PLKDNPSPEPQLDDIKR;T(0.487)S(0.487)PLKDNPS(0.025)PEPQLDDIKR 102.94 7.151599999999999e-10 188203000.0 10261.3 11073.6 10369.300000000001 10242.5 14590.5 9672.8 9533.6 9898.599999999999 14532.199999999999 14318.9 15508.3 True False 11993.156575301513 11637.198940830205 11839.82266199555 12751.9129598033 12444.256777918474 10696.369275715015 11265.731715082764 11301.756863191129 11240.679903154789 11084.250545092058 11657.161102694206 1.0288230959190956 0.9982875623242963 1.0156694719831165 1.093912389771818 1.0675203566537614 0.9175792614929947 0.9664215511681506 0.9695119389384662 0.9642725020379824 0.9508533379134876 1.0 13.508928867767304 -7.242997126975814 24.97771198189204 0.9761120143340717 1.0400282251288515 0.5903560188372341 0.03166998985638481 579.684697617864 785110.2259473875 0.004985983765242592 0.008625925080118573 5.7148241723423726e-08 7.242997126975814 0.06391621079477983 T(ph)SPLNSSGSSQGR ddPTM_A549_MK2206_60min_R1 2 TSPLNSSGSSQGR 13 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.989)S(0.011)PLNSSGSSQGR;T(0.981)S(0.019)PLNSSGSSQGR 256.13 6.368799999999999e-69 81579000.0 4397.3 5012.1 3884.2 4865.1 5724.3 4293.5 3929.0 4372.7 5689.4 5583.3 5044.3 True False 5139.456736336853 5267.1944815900015 4435.037966277675 6057.049718402637 4882.263052934359 4747.83532020536 4642.848442200235 4992.543615832118 4400.759984104879 4322.028652229741 3791.661094402376 1.3554631092753058 1.3891522344562792 1.1696820617288595 1.5974660096453903 1.287631708472584 1.2521781883973182 1.2244893007590962 1.3167167348375632 1.1606417014964008 1.1398773636732318 1.0 11.888614303941658 -9.110014322880348 0.405661600559952 0.9878137840100367 1.3739617753576456 0.46595979728794845 0.10904811015622716 0.4637752758204424 0.1957132362793717 0.0646144867139777 0.04440348196961377 7.76221516692009e-10 9.110014322880348 0.3861479913476089 T(ph)SPLNSSGSSQGR ddPTM_A549_PD325901_60min_R1 1 TSPLNSSGSSQGR 13 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.982)S(0.018)PLNSSGSSQGR 203.93 8.628799999999999e-31 43966000.0 5447.0 6643.8 6022.0 6103.9 6161.2 5099.6 5396.9 5433.6 6620.7 5950.6 6033.2 True False 5999.975430130538 7203.696342418125 6430.689133227767 6480.924040037299 5728.458566986111 5058.070548366991 5602.281982797001 5325.222585423263 6342.455003104436 5574.8781004642515 5291.15464760588 1.1339633463265684 1.3614601768779568 1.2153659383472186 1.2248600677301618 1.0826481077392247 0.9559483487513724 1.0588014064816453 1.006438658494474 1.1986901584844518 1.053622218920921 1.0 12.369366869497414 -6.7408788988867405 4.639934051536712 1.0748322084022293 1.2442431202317763 0.5472049787888631 0.0781744086656173 0.14978962234044738 7.808282687561149 0.013482223853799926 0.02782046875463258 1.8160219819495188e-07 6.7408788988867405 0.16941091182954704 T(ph)SPLVSQNNEQGSTLR ddPTM_A549_MK2206_60min_R1 2 TSPLVSQNNEQGSTLR 16 0 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 T(0.911)S(0.089)PLVSQNNEQGSTLR;T(0.99)S(0.01)PLVSQNNEQGSTLR 138.19 1.1431e-10 14896700.0 3518.7 4561.2 3988.2000000000003 4189.799999999999 5761.1 3935.1000000000004 4489.3 4763.3 5994.799999999999 5304.3 5388.700000000001 True False 4112.570536044501 4793.345597539618 4553.786730113958 5216.301188087266 4913.6498216830205 4351.509670092025 5304.947699559564 5438.512361994453 4636.9873717284645 4106.054946003659 4050.537069445927 1.0153148744314688 1.1833851944466465 1.1242426996815191 1.2878048265339797 1.213086002532291 1.0743043688987317 1.309689951877228 1.3426645081261748 1.144783344091888 1.0137063000796895 1.0 11.983897495389217 -9.93887366822805 1.0212634503292652 1.0197270742271503 1.19257199318553 0.3457535013582316 0.09508945769138458 0.3781038118349275 0.8006787706394707 0.03324644674260355 0.01856291513866212 1.1511351935656326e-10 9.93887366822805 0.17284491895837983 T(ph)SPLVSQNNEQGSTLR ddPTM_A549_PD325901_60min_R1 1 TSPLVSQNNEQGSTLR 16 0 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 T(0.5)S(0.5)PLVSQNNEQGSTLR 84.169 0.00013431 10183000.0 5686.3 6261.3 5799.1 6009.8 6766.7 5716.7 6151.3 6099.1 6284.2 6813.5 7544.6 True False 6263.568989967185 6788.961725034257 6192.6617988211865 6381.011696753904 6291.4303358477155 5670.145090565845 6385.391087620519 5977.448665848614 6020.096927894168 6383.294447200818 6616.662029159867 0.9466357753144126 1.0260402745546107 0.9359193157410645 0.9643853152288203 0.9508465610184041 0.8569494808072879 0.9650471883677708 0.9033933786410403 0.9098389643242144 0.9647303155381686 1.0 12.691887875036263 -4.872518192834887 18.353713649431253 0.9505160933573735 0.09931829391739005 0.0 0.04431414335840026 8117.355332020683 1015204.0249680122 0.00655260691108074 38170.0247689143 1.341163752140838e-05 4.872518192834887 -0.8511977994399835 T(ph)SPPCS(ph)PANLSR ddPTM_A549_MK2206_60min_R1 1 TSPPCSPANLSR 12 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 T(0.893)S(0.107)PPCS(0.999)PANLS(0.001)R 78.541 0.0014939999999999999 5961700.0 2834.6 3800.2 2617.1 2310.9 3402.0 2777.5 2532.1 2585.8 4251.3 4111.7 3734.5 True False 3313.0111806837026 3993.6139480334223 2988.2441330377683 2877.0706037402433 2901.5703066021474 3071.4132064447144 2992.1497939667133 2952.345068680379 3288.3873379310758 3182.8641143003306 2807.120583043371 1.1802169100594406 1.422672745929461 1.0645228961977937 1.0249187801619248 1.0336464789326498 1.0941507910268706 1.065914236830803 1.0517343239596644 1.1714449880759785 1.1338537195468792 1.0 11.454875322442774 -5.780259869691953 24.999208604142225 1.0726839256520122 1.301444807621268 0.620877740763623 0.0694055717768125 105.51932845385811 140161.43141463658 0.010378086199525238 0.03234447219100133 1.6585941540173727e-06 5.780259869691953 0.2287608819692557 T(ph)SPPLLDR ddPTM_A549_MK2206_60min_R1 4 TSPPLLDR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.86)S(0.14)PPLLDR;T(0.848)S(0.152)PPLLDR;T(0.904)S(0.096)PPLLDR;T(0.986)S(0.014)PPLLDR 170.68 6.1753e-06 1819614400.0 9613.6 10691.5 9005.3 7924.0 13660.5 11495.900000000001 9258.2 10715.3 15362.5 12738.8 13350.5 True False 11236.140650046156 11235.65168291125 10282.386951681261 9865.380355721874 11651.058545954927 12712.388507639173 10940.295099918107 12234.226589229977 11882.918278871446 9861.096232519167 10035.202394944585 1.1196725494750923 1.1196238242859369 1.0246317460284806 0.9830773677959638 1.1610187903957332 1.2667794835949964 1.0901917738529598 1.2191310257372776 1.1841234298231675 0.9826504582993635 1.0 13.292782093533317 T(ph)SPPLLDR ddPTM_A549_PD325901_60min_R1 3 TSPPLLDR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.984)S(0.016)PPLLDR;T(0.863)S(0.137)PPLLDR;T(0.985)S(0.015)PPLLDR 191.79 4.0319000000000003e-10 2393312700.0 16041.3 16010.4 14837.000000000002 15592.8 19313.600000000002 14678.0 14748.599999999999 16460.9 15051.1 16249.4 17406.4 True False 17669.80096701908 17359.652596503678 15843.928042128939 16555.931842181824 17957.07936430289 14558.46723447539 15309.866043743588 16132.574436173754 14418.554608610153 15223.410110860048 15265.52314826079 1.1574972436520927 1.137180326406401 1.0378896214856577 1.0845309185534235 1.176316015501162 0.9536828245636668 1.0029047740488246 1.0567980068217804 0.944517555577705 0.9972412974654236 1.0 13.897989410985321 -7.270993776754014 24.981033089481954 0.9812744901300224 1.1133246252536608 0.6599883697578146 0.04461693571735442 310.1311140652652 810871.8074875148 0.007022334208625648 0.01130998552455256 5.358043352951867e-08 7.270993776754014 0.1320501351236384 T(ph)SPQELSEELSR ddPTM_A549_MK2206_60min_R1 2 TSPQELSEELSR 12 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3;K7ERN1 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 T(0.873)S(0.127)PQELSEELSR;T(0.793)S(0.207)PQELSEELSR 224.34 4.346899999999999e-40 15071900.0 1476.4 1581.01 1746.68 1085.14 2071.75 1529.35 1783.78 1707.26 2727.8 2233.5 1986.6399999999999 True False 1725.5802254855764 1661.4766559602972 1994.385488630321 1350.999348713786 1766.998319430629 1691.1848018996307 2107.869736377689 1949.2693332644708 2109.957655401498 1728.9507987668821 1493.3024595253141 1.155546362680001 1.1126189777310362 1.3355536086535942 0.904705768142401 1.1832822668706489 1.132513236760635 1.4115490957188483 1.3053412728484342 1.4129472846861875 1.1578034896671068 1.0 10.54429068902504 T(ph)SPQELSEELSR ddPTM_A549_PD325901_60min_R1 2 TSPQELSEELSR 12 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3;K7ERN1 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 T(0.5)S(0.5)PQELSEELSR;T(0.88)S(0.12)PQELSEELSR 201.06 1.2099999999999999e-24 19036200.0 1933.25 2365.6 2146.3 2278.1 3255.9 2062.24 2338.2 2207.6000000000004 2448.1000000000004 1873.88 2553.6 True False 2129.5121168165706 2564.957414073921 2291.9608247503747 2418.8130630595156 3027.216816245226 2045.4458011734937 2427.1814805121344 2163.567686171304 2345.2148704970737 1755.5628970016392 2239.5233886041183 0.9508773731288794 1.1453139659651619 1.0234145516912598 1.0800570672169436 1.351723688910466 0.9133397809470559 1.0837937629331849 0.9660839878612936 1.0471937388244166 0.7839002289214185 1.0 11.128976017811258 T(ph)SPQELSEELSRR ddPTM_A549_PD325901_60min_R1 1 TSPQELSEELSRR 13 1 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3;K7ERN1 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 T(0.495)S(0.495)PQELSEELS(0.009)RR 50.563 0.017297 1970900.0 272.8 417.84 308.44 510.39 434.61 464.87 378.13 492.32 564.5 511.67 370.1 True False 300.4944551752542 453.0528432096078 329.37259320039425 541.9156311202082 404.084492923105 461.0842528471571 392.51994407067576 482.5002913824313 540.7760281016292 479.36306887785145 324.58004625719946 0.925794603335352 1.3958123687326287 1.0147653775962469 1.6695900976327749 1.2449455768544246 1.4205563717302288 1.2093163107125824 1.4865371329699508 1.6660790900039326 1.4768716512474733 1.0 8.342430501889133 -4.764512025162743 1.5986495735572905 1.3376964349057767 1.9217431424551953e-10 0.23296656424395956 0.217597858943901 6.876097178616368 5.48851556294708 0.03760860610699555 21.305643298926743 1.7198397200049266e-05 4.764512025162743 -1.3376964347136024 T(ph)SPQPESGIKR ddPTM_A549_MK2206_60min_R1 1 TSPQPESGIKR 11 1 A0A1B0GVV3;Q5EBL4-3;Q5EBL4-2;Q5EBL4 A0A1B0GVV3 RILPL1 RILP-like protein 1 1 T(0.758)S(0.241)PQPES(0.001)GIKR 47.506 0.019785 14613000.0 3435.3 3315.1 2806.7 2746.3 3873.4 3050.0 2324.5 2727.2 4677.0 4042.3 4634.5 True False 4015.094654978732 3483.8244300630486 3204.732264031603 3419.14362328609 3303.627991061954 3372.7489755738534 2746.8315611846388 3113.7889516997184 3617.6669676342876 3129.1416225007233 3483.6257443070026 1.1525619999623278 1.000057034185251 0.9199416066059415 0.9814899401503476 0.9483303413005247 0.9681720205121501 0.788497893516132 0.8938356701457734 1.0384775039472416 0.8982427654906435 1.0 11.766373924145725 -8.784262698928927 24.993526157443632 1.0181699369341495 0.9521715963856626 0.0 0.0904210756296138 387.6642070661228 424524.2036258758 0.014748424222177526 0.015706293112418956 1.6433773654993246e-09 8.784262698928927 -0.06599834054848686 T(ph)SPQPESGIKR ddPTM_A549_PD325901_60min_R1 2 TSPQPESGIKR 11 1 A0A1B0GVV3;Q5EBL4-3;Q5EBL4-2;Q5EBL4 A0A1B0GVV3 RILPL1 RILP-like protein 1 1 T(0.864)S(0.136)PQPESGIKR;T(0.856)S(0.144)PQPESGIKR 94.781 0.000177 52818000.0 5846.2 6199.299999999999 5776.7 7534.9 6277.299999999999 8267.0 7226.299999999999 8028.900000000001 7796.2 8176.2 8619.6 True False 6439.701920255025 6721.736767445243 6168.741600119044 8000.313660000502 5836.404103509369 8199.676292915112 7501.300800883089 7868.757290949796 7468.552826015803 7659.953336640974 7559.44384414633 0.8518750920071482 0.8891840333796821 0.8160311429386199 1.0583204035830704 0.7720679224343732 1.0846930623427473 0.9923085554358256 1.040917487209457 0.9879764940378638 1.013295884534214 1.0 12.884064382493797 -7.270901368996412 24.99786369149022 1.0035533370671137 0.8847761847466595 0.48331967367257067 0.07205106498774452 477.12395439761855 1260524.2929607395 0.00968449862294283 0.01560453160449363 5.359183541168069e-08 7.270901368996412 -0.11877715232045416 T(ph)SPQVLGSILK ddPTM_A549_MK2206_60min_R1 3 TSPQVLGSILK 11 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 T(0.5)S(0.5)PQVLGSILK;T(0.5)S(0.5)PQVLGSILK;T(0.5)S(0.5)PQVLGSILK 75.08800000000001 0.0014314 45987600.0 3445.31 3750.76 4303.88 3289.13 4556.71 3705.42 3483.0499999999997 3998.74 5308.63 4972.2 5364.82 True False 4026.794098257732 3941.6576632087367 4914.2349009585405 4094.966997654655 3886.4239952372377 4097.525084941272 4115.875099670537 4565.573640627652 4106.233781140134 3848.9765666571247 4032.5871325003977 0.9985634447434558 0.9774513317867777 1.2186308043668925 1.0154689441553564 0.9637544999126821 1.0161032980335405 1.0206537303308054 1.1321698677833099 1.018262878449962 0.954468295461374 1.0 11.977489990831138 T(ph)SPQVLGSILK ddPTM_A549_PD325901_60min_R1 1 TSPQVLGSILK 11 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 T(0.914)S(0.086)PQVLGSILK 145.29 2.3315000000000002e-11 72181000.0 3758.6 3760.5 3665.4 3673.5 4536.8 3979.3 3938.5 3891.2 3593.4 3887.2 4448.9 True False 4140.170305064921 4077.410532475897 3914.15608584076 3900.403751876184 4218.150819110334 3946.8939001327094 4088.381772729895 3813.5869634126543 3442.3818943851093 3641.7615286062996 3901.7135039007117 1.0611159176412654 1.0450307354447048 1.0031890045047154 0.9996643136347099 1.0811021400964644 1.0115796293569042 1.0478426385337014 0.9774133748159742 0.8822743881485945 0.9333749197539679 1.0 11.929892131887286 -8.437576834469361 4.623030379951494 0.9437525027638248 1.033765519772191 0.6089536093916688 0.03446698213818242 0.15675422676437056 5.910324032909387 0.007770985556897682 0.009366290335848352 3.651095271283574e-09 8.437576834469361 0.09001301700836628 T(ph)SPSGGTWSSVVSGAK ddPTM_A549_MK2206_60min_R1 1 TSPSGGTWSSVVSGAK 16 0 F8WB06 F8WB06 ATXN2 1 T(0.468)S(0.468)PS(0.056)GGT(0.007)WS(0.001)SVVSGAK 66.262 0.0027271 1443800.0 1302.9 1654.1 1238.7 1675.8 2289.3 1409.8 1396.3 1304.0 2323.8 2368.9 2206.4 True False 1522.7976671533172 1738.2866247676657 1414.3662861923062 2086.3710752295196 1952.5470026173734 1558.9841002504984 1649.9896360000487 1488.8459933325141 1797.4630103460677 1833.763844727498 1658.489986457864 0.9181832146033314 1.0481140308119847 0.8528036332694734 1.2579943757667822 1.1773040648786457 0.9400021181798713 0.9948746446905176 0.8977117772729707 1.0837949128562523 1.105682795615774 1.0 10.695654586187363 T(ph)SPSGGTWSSVVSGAK ddPTM_A549_PD325901_60min_R1 1 TSPSGGTWSSVVSGAK 16 0 F8WB06 F8WB06 ATXN2 1 T(0.491)S(0.491)PS(0.018)GGTWSSVVSGAK 158.65 2.6844e-20 21168000.0 3052.2 2403.2 2824.2 2893.0 3148.7 3023.3 2749.8 2439.6 3893.3 3196.7 3794.2 True False 3362.0570970891185 2605.726098031132 3015.867195294231 3071.694039520294 2927.5461744253034 2998.6792471719195 2854.445143748297 2390.9402641708234 3729.678140315454 2994.8598164477658 3327.537453415471 1.01037393091946 0.7830794196941485 0.9063360630843287 0.9231132879864139 0.8797936057550287 0.9011706972956824 0.8578250985029245 0.7185314358270257 1.1208523397647157 0.9000228722816519 1.0 11.700239189282401 -8.78021061523429 24.99997394418361 1.0570691676623913 0.8730662670424242 0.26712748837861344 0.08918818317019178 132.61014504136602 176612.62359812838 0.013549129355533344 0.014436030410879893 1.6587822701266806e-09 8.78021061523429 -0.18400290061996716 T(ph)SPSGGTWSSVVSGVPR ddPTM_A549_MK2206_60min_R1 1 TSPSGGTWSSVVSGVPR 17 0 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 T(0.827)S(0.172)PS(0.001)GGTWSSVVSGVPR 145.79 2.5038e-16 39577000.0 2719.6 2321.7 2408.8 2009.6 3639.3 2987.1 2597.0 3109.8 3817.4 3807.4 3324.7 True False 3178.60199216376 2439.8646132175154 2750.4040608541427 2501.9520902143718 3103.9637909515595 3303.1929393234946 3068.8412838875074 3550.623673363078 2952.764995135155 2947.3056956458586 2499.0852329479967 1.2719061960180464 0.9763030812436025 1.100564328336126 1.0011471626611923 1.242039987283679 1.3217608170278161 1.2279858419504202 1.4207693385369873 1.1815383309884089 1.1793538118622418 1.0 11.287184390990452 -4.208988569756638 16.296930804781486 1.1359660407786598 1.1263329590356026 0.0 0.14180634598719424 0.0 0.0 0.02041175275706581 0.0 6.180326659928315e-05 4.208988569756638 -0.009633081743057215 T(ph)SPSGGTWSSVVSGVPR ddPTM_A549_PD325901_60min_R1 1 TSPSGGTWSSVVSGVPR 17 0 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 T(0.972)S(0.028)PSGGTWSSVVSGVPR 156.49 4.2661e-22 50435000.0 3463.6 3392.3 3185.7 2766.2 3420.1 3639.6 2627.0 2540.8 3369.0 3986.5 4517.9 True False 3815.222122232442 3678.1810262778854 3401.9007591703257 2937.0618915039854 3179.8839747044744 3609.9603043055354 2726.9719225495596 2490.1217507809597 3227.4126460130888 3734.7917096596557 3962.226941327754 0.9628984353314073 0.928311548213671 0.8585830164564826 0.7412654386020018 0.8025496827394965 0.9110937757381022 0.6882422342107802 0.6284652009222148 0.814545126718959 0.9425991405752533 1.0 11.952095799354813 -10.447819566014775 1.0076965667519904 0.9900869453198435 0.8137335262354979 0.26843336697277775 0.09781746405713757 0.4724565164412693 0.921438755285226 0.051677111003401596 0.018852302607891645 3.5659925702339456e-11 10.447819566014775 -0.17635341908434565 T(ph)SPSKRPNAR ddPTM_A549_MK2206_60min_R1 1 TSPSKRPNAR 10 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.497)S(0.497)PS(0.006)KRPNAR 61.235 0.0026319000000000004 66063000.0 2922.2 3644.6 3688.0 2857.3 4926.6 4125.0 3975.2 3680.5 5594.3 6162.3 5761.2 True False 3415.3959190693276 3830.0945726547598 4211.013856040387 3557.33862826907 4201.903666227559 4561.50476204661 4697.442384177752 4202.222146058525 4327.199982261382 4770.232150096779 4330.535038968932 0.7886775856413595 0.8844391139175903 0.9724003658086086 0.8214547616536653 0.9702966558210787 1.053335147042863 1.084725638265746 0.9703701986577259 0.999229874212415 1.1015341308108977 1.0 12.080329566053134 -6.925574578722793 5.828017877168765 1.007813904895511 0.8762699528902675 0.6215702777111782 0.05905776129463456 0.10828421798092162 6.386825633607601 0.007341884924227698 0.013995895257279905 1.1869308591986603e-07 6.925574578722793 -0.1315439520052435 T(ph)SPSKRPNAR ddPTM_A549_PD325901_60min_R1 1 TSPSKRPNAR 10 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.441)S(0.441)PS(0.117)KRPNAR 40.516 0.034043000000000004 105620000.0 4049.1 4329.4 3696.7 3333.0 4505.6 4499.5 4015.3 4700.9 4054.9 4114.0 4922.1 True False 4460.1616512101255 4694.253732030619 3947.5802920629512 3538.8718402077893 4189.142199476178 4462.857563804471 4168.104438756467 4607.136861715293 3884.4866542945892 3854.241337900367 4316.712903762662 1.0332310141178087 1.0874602589249969 0.9144875696092839 0.8198070891217093 0.9704472576401161 1.0338555431644347 0.9655736973203244 1.0672789607341 0.8998714394252806 0.8928648774721196 1.0 12.075717429791515 T(ph)SPSSDKVQK ddPTM_A549_MK2206_60min_R1 3 TSPSSDKVQK 10 1 F8WDU9;P38435 F8WDU9 GGCX Vitamin K-dependent gamma-carboxylase 1 T(0.918)S(0.082)PSSDKVQK;T(0.843)S(0.156)PS(0.001)SDKVQK;T(0.499)S(0.499)PS(0.001)S(0.001)DKVQK 138.75 1.0380999999999999e-07 64293000.0 8323.61 9013.949999999999 8688.130000000001 7946.349999999999 11770.4 7935.8 8394.599999999999 7566.71 12287.4 11842.1 12539.0 True False 9728.431875273647 9472.721553306641 9920.237476431708 9893.206106725203 10038.989752154597 8775.561088642291 9919.79015853757 8639.314314577514 9504.323518945801 9166.96138530436 9425.220241205201 1.0321702439103613 1.0050398092443267 1.0525204952837484 1.049652512465869 1.0651199118155474 0.9310722576303598 1.052473035608251 0.9166167042769079 1.008392724595949 0.9725991701741054 1.0 13.202310615211257 -7.2070970561928185 24.999318769133527 0.9962632733190153 1.04004009044725 0.3380778214791176 0.0388916721602216 334.6257241113061 153939.0268270429 0.005193412342888083 0.008995246993425915 6.207302978326468e-08 7.2070970561928185 0.04377681712823467 T(ph)SPSSDKVQK ddPTM_A549_PD325901_60min_R1 1 TSPSSDKVQK 10 1 F8WDU9;P38435 F8WDU9 GGCX Vitamin K-dependent gamma-carboxylase 1 T(0.845)S(0.155)PSSDKVQK 107.39 0.000106 52844000.0 13616.0 15219.0 15281.0 14291.0 16496.0 14921.0 16260.0 16587.0 15563.0 15821.0 17091.0 True False 14998.286296430586 16501.55854108515 16318.060552117831 15173.722612784139 15337.37786811059 14799.48832304178 16878.783197813413 16256.159272750232 14908.941231790355 14822.059359971243 14988.915348775452 1.000625191845913 1.1009174551401597 1.088675209140531 1.0123295955516745 1.023248014364402 0.9873621925719163 1.1260843633487034 1.0845454053537176 0.9946644493531261 0.9888680411543027 1.0 13.871608368068085 -8.78055001450651 24.934322418127014 0.9974804249801508 1.053665969733859 0.2749159969666771 0.04219891136429153 228.54630302661067 298191.17765883624 0.007349294577457314 0.007829984368360177 1.6574864453141165e-09 8.78055001450651 0.056185544753708294 T(ph)SPSSPAPLPHQEATPR ddPTM_A549_MK2206_60min_R1 3 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.452)S(0.452)PS(0.093)S(0.003)PAPLPHQEATPR;T(0.826)S(0.167)PS(0.003)S(0.004)PAPLPHQEATPR;T(0.612)S(0.382)PS(0.005)S(0.001)PAPLPHQEATPR 145.17 2.2640000000000004e-16 41739500.0 3018.25 3658.05 3591.9400000000005 3406.3199999999997 4631.8 3372.7 2837.9 3376.7000000000003 4941.5 4833.700000000001 4843.2 True False 3527.6568108722863 3844.229120205163 4101.331103596994 4240.868552915514 3950.4683557083567 3729.5968753829297 3353.5096956273983 3855.3575657100473 3822.258139953994 3741.763812849553 3640.4997744800244 0.9690034416706274 1.0559619168646253 1.1265846333372704 1.1649138348102879 1.085144513234479 1.0244738652444034 0.9211673955140907 1.0590187624062444 1.0499267619100265 1.0278159716090058 1.0 11.829920804500896 -7.272102067048605 6.519759763837994 1.0185265107568209 1.086351759815474 0.25176805840313865 0.05643871753294184 0.1784760031319189 38.93853703337395 0.008756034638965213 0.014461330990289477 5.344387418775911e-08 7.272102067048605 0.06782524905865306 T(ph)SPSSPAPLPHQEATPR ddPTM_A549_PD325901_60min_R1 2 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.381)S(0.381)PS(0.119)S(0.119)PAPLPHQEATPR;T(0.477)S(0.477)PS(0.043)S(0.002)PAPLPHQEATPR 156.08 3.7186000000000004e-22 92685000.0 6489.799999999999 5905.799999999999 5829.4 6725.299999999999 7168.0 5914.0 5422.1 6651.799999999999 6437.9 6684.7 6476.299999999999 True False 7148.639718461745 6403.5024924069 6225.018139029884 7140.706506735503 6664.544408257554 5865.838344780453 5628.440982586969 6519.124630763844 6167.337451400317 6262.626901181959 5679.756156648206 1.258617363369411 1.1274255999373393 1.096000949220935 1.2572206112012823 1.1733856567868048 1.0327623551082268 0.9909652505061908 1.1477824841358988 1.0858454626051846 1.102622494427247 1.0 12.471613277922707 -7.2559299492365135 22.027500356061925 1.0458020030934578 1.178811023180862 0.48248105383581774 0.06219581401049637 56.40714999925645 225521.07973302127 0.009361682206126811 0.015889386967039988 5.54715180104738e-08 7.2559299492365135 0.13300902008740412 T(ph)SPSVTPTPAR ddPTM_A549_MK2206_60min_R1 2 TSPSVTPTPAR 11 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 T(0.869)S(0.131)PSVTPTPAR;T(0.656)S(0.343)PS(0.002)VTPTPAR 123.67 6.6555999999999994e-06 23891000.0 3877.1 4891.2 3308.1 4546.7 5724.5 4160.0 4105.799999999999 4036.6 5703.1 6523.1 6972.4 True False 4531.459694005776 5140.141187995656 3777.238323526897 5660.641704109116 4882.433633199298 4600.208438815487 4851.770713663965 4608.800411569038 4411.356955979284 5049.527179510296 5240.960651549496 0.8646238724700299 0.9807631710564297 0.7207148793246811 1.0800771233486635 0.9315913546795664 0.877741457084863 0.9257407250767152 0.8793808459917442 0.8417077038491142 0.9634735910519377 1.0 12.355615562111964 -11.025342325636135 1.3340353593851748 0.9996501072059812 0.8961660620478212 0.11520761296868642 0.08501434981926029 0.6061908629338985 1.9325571534039727 0.05582729977319585 0.012767817120808942 9.433170286946922e-12 11.025342325636135 -0.10348404515816001 T(ph)SPSVTPTPAR ddPTM_A549_PD325901_60min_R1 2 TSPSVTPTPAR 11 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 T(0.912)S(0.088)PSVTPTPAR;T(0.905)S(0.095)PSVTPTPAR 121.68 4.8278e-12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)SPTFR ddPTM_A549_MK2206_60min_R1 2 TSPTFR 6 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 1 T(0.58)S(0.419)PT(0.001)FR;T(0.968)S(0.031)PTFR 117.18 0.020049 953530000.0 20956.0 21192.6 20459.6 18353.3 26062.1 19380.8 19898.9 20471.7 27354.2 25010.1 26941.0 True False 24492.86047499036 22271.212819086668 23361.07892869952 22849.859323910958 22228.39961425511 21431.66339206616 23514.272554466337 23373.62616695187 21158.51737568138 19360.30103973119 20250.806166226117 1.2094758240212211 1.0997691961631701 1.1535876022388014 1.1283431946536275 1.0976550479914813 1.058311615653576 1.1611524184001605 1.1542071942762422 1.0448234604590272 0.9560261888250111 1.0 14.30569172107097 -8.906248250075752 3.7103315671259103 1.0186661457837434 1.1294461997168217 0.6515532391874657 0.0427642731352766 0.10804147004843567 2.733109469079579 0.007055945452855548 0.00738110284253548 1.240942760933724e-09 8.906248250075752 0.11078005393307833 T(ph)SPTFR ddPTM_A549_PD325901_60min_R1 2 TSPTFR 6 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 1 T(0.72)S(0.28)PTFR;T(0.794)S(0.203)PT(0.003)FR 89.369 0.040295 1153310000.0 21642.4 22223.4 23440.0 22410.0 26389.0 23899.0 23438.0 24771.0 24855.0 26521.0 25432.0 True False 23839.52051570719 24096.24391102909 25030.77935617053 23794.214803197287 24535.52767710778 23704.374467688205 24329.945915765737 24276.922972526412 23810.43078559076 24846.45953389782 22304.025226730875 1.068843864431074 1.0803540466834785 1.1222539026799387 1.0668125847831473 1.1000493152107136 1.0627845972519365 1.0908320658912654 1.0884547845395667 1.0675396276477707 1.1139899314729924 1.0 14.445016477614251 -10.258796299331358 0.510417751074716 0.9916298687482673 1.0878414532820846 0.0 0.037320470960348726 0.3568448323643472 0.15917138953126206 0.01596970028141594 0.0040007255761283856 5.510661068109139e-11 10.258796299331358 0.09621158453381728 T(ph)SPTPGDFPK ddPTM_A549_MK2206_60min_R1 2 TSPTPGDFPK 10 0 Q9UPU7;C9JW56;Q9UPU7-2 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 T(0.908)S(0.092)PTPGDFPK;T(0.878)S(0.121)PT(0.001)PGDFPK 127.93 1.6069999999999998e-06 18087400.0 11089.3 13453.599999999999 11928.5 11661.8 16597.4 11876.5 11749.6 12833.2 19161.2 18923.199999999997 19650.8 True False 12960.90273264509 14138.330775028282 13620.14066751023 14518.941523518097 14155.944446442825 13133.263347017333 13884.350230714143 14652.345400026705 14821.218794148834 14648.435977266816 14770.96402551043 0.8774581476375378 0.9571704832948243 0.9220888118058745 0.9829379787563579 0.9583629356888673 0.8891270281570871 0.9399759018257003 0.9919694729958815 1.0034022673504324 0.9917048035570326 1.0 13.850476366074437 -8.28176967436801 4.05042114335808 1.001339058907488 0.9339243556895233 0.5396941218266871 0.028588706542911922 0.1195980322222571 4.579008785559979 0.004508762653346272 0.00562640008191476 5.226733123540802e-09 8.28176967436801 -0.06741470321796472 T(ph)SPTPPESATTVK ddPTM_A549_MK2206_60min_R1 2 TSPTPPESATTVK 13 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 T(0.499)S(0.499)PT(0.002)PPESATTVK;T(0.491)S(0.491)PT(0.018)PPES(0.001)ATTVK 70.089 0.0031425 204780000.0 5226.700000000001 5267.1 4919.4 5283.700000000001 8316.1 6008.5 4979.0 5707.700000000001 9570.3 9196.0 8451.7 True False 6108.839179453715 5535.1728923969395 5617.04489246341 6578.206737194308 7092.812706271055 6644.315481880494 5883.619850780092 6516.783954098151 7402.642330628696 7118.617213100623 6352.909634946487 0.9615813116323623 0.8712815403431382 0.8841688635967391 1.0354636088334221 1.1164668024324573 1.0458696666061522 0.9261299449964003 1.0257951597879205 1.1652365224759018 1.1205286431184356 1.0 12.633201782764779 -6.333444342500449 4.718811694011745 1.0639758674597026 0.9021957089195364 0.5098808692616967 0.06479445415938212 0.14860341476815458 6.289043853850286 0.011082281019795427 0.026776500844281566 4.6404025577436873e-07 6.333444342500449 -0.16178015854016625 T(ph)SPTPPESATTVK ddPTM_A549_PD325901_60min_R1 2 TSPTPPESATTVK 13 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 T(0.844)S(0.155)PTPPESATTVK;T(0.582)S(0.418)PTPPESATTVK 242.35 1.0559999999999999e-56 340930000.0 32745.0 34283.0 31996.0 33852.0 38322.0 35234.0 35297.0 35432.0 36210.0 34456.0 36657.0 True False 36069.248294405064 37172.148726198946 34167.440967578186 35942.96115652988 35630.39492372296 34947.06598579545 36640.246650259534 34725.28096413372 34688.21962366694 32280.44227970225 32148.421387868562 1.1219601690307586 1.1562666881125965 1.0628030706500418 1.118031915871714 1.1083093161510054 1.0870538731641417 1.1397214876648964 1.0801550889599063 1.0790022690431944 1.0041066057409433 1.0 14.972460276922002 -10.313483021015982 0.33850930436488597 0.9691278961127413 1.1205074542885518 0.7456038009628536 0.02421454881787222 0.8498400777007993 0.1531245794411823 0.048239580554231505 0.010328586968178843 4.8586652578790505e-11 10.313483021015982 0.1513795581758105 T(ph)SPTTQSK ddPTM_A549_MK2206_60min_R1 1 TSPTTQSK 8 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 T(0.991)S(0.009)PTTQSK 111.46 0.0016057000000000003 11424000.0 1759.9 1456.2 1143.1 1282.3 2420.3 1960.7 1984.2 1742.1 1887.6 2235.9 2221.6 True False 2056.9280945760397 1530.3143600669102 1305.2087686658801 1596.4635575646348 2064.2770761520233 2168.179972592674 2344.7034560991865 1989.0480099574952 1460.0616138778012 1730.8086371000095 1669.9154069592048 1.2317558638024408 0.9164023241473662 0.78160172858251 0.9560146285922827 1.2361566744934238 1.2983771294982978 1.404085168822247 1.191107047499734 0.8743326804418601 1.0364648591701342 1.0 10.705559306492228 -8.76210836579523 24.999991102759477 0.9406570961943641 1.1213046479865536 0.1285881522369755 0.1766830331458009 25.629970177793403 957788.5855050826 0.03389546038881427 0.037143188542585914 1.7293847867490463e-09 8.76210836579523 0.1806475517921895 T(ph)SPTTQSK ddPTM_A549_PD325901_60min_R1 2 TSPTTQSK 8 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 T(0.852)S(0.148)PTTQSK;T(0.497)S(0.497)PT(0.005)T(0.002)QSK 132.39 0.0011394 45781000.0 16791.5 15295.5 13129.2 14450.2 16040.6 14313.1 9600.4 12400.0 14584.9 15684.6 20081.7 True False 18496.160718751038 16584.505464561928 14020.226464293259 15342.756035214712 14913.963593065864 14196.538859093183 9965.74847554046 12152.672272388187 13971.947373355972 14694.271679249418 17611.778208384752 1.0502154013014564 0.941671265009813 0.7960710326012623 0.871164504440001 0.8468175908532342 0.8060820827470099 0.5658570280425113 0.6900309627225744 0.7933297369543354 0.8343434436537279 1.0 14.10425296066082 -5.479810077079874 3.296953966844068 0.8465492225758317 1.0447860106327909 0.26454770561458896 0.1108851259772849 0.3622760250728218 7.292787099828582 0.019260799425722647 0.13557564730531027 3.3127596132135923e-06 5.479810077079874 0.1982367880569592 T(ph)SPVTR ddPTM_A549_PD325901_60min_R1 2 TSPVTR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.846)S(0.154)PVTR;T(0.844)S(0.156)PVTR 110.67 0.025021 294330000.0 9944.6 10195.0 8852.900000000001 8176.4 9022.6 6820.700000000001 6081.1 7030.5 8547.1 11460.6 11114.7 True False 10954.168471172405 11054.168429355617 9453.711030812377 8681.437658048297 8388.883702280218 6765.1544805958765 6312.519588205607 6890.271162179448 8187.895110340892 10736.975760121763 9747.662361888391 1.1237738920873208 1.1340327576974178 0.969843915375515 0.8906173947910997 0.8606046650814708 0.6940283967001581 0.6475931719677145 0.7068639542870473 0.8399855069205198 1.1014923744282945 1.0 13.250840564727717 -5.9478214765122726 2.1210912361775915 0.8641716732715867 1.139287969481326 0.42583997576146493 0.12691022554198758 0.2740377514022182 2.3766622605230645 0.019479852360981088 0.0850218037991045 1.127660903432837e-06 5.9478214765122726 0.2751162962097393 T(ph)SPYGSSLDLSTGSSSRPPPK ddPTM_A549_MK2206_60min_R1 1 TSPYGSSLDLSTGSSSRPPPK 21 1 J3KNZ9 J3KNZ9 FBRS 1 T(0.499)S(0.499)PY(0.001)GSSLDLSTGSSSRPPPK 89.66799999999999 1.1437e-06 8799900.0 1671.5 2231.3 2227.3 2220.4 2615.3 2603.9 2021.8 2207.1 3409.2 3093.6 3291.6 True False 1953.6083357485377 2344.863639347133 2543.164631659096 2764.398099677542 2230.59283446696 2879.442969671071 2389.134889396905 2519.9631839602694 2637.0216433737037 2394.753611401488 2474.2048764615233 0.7895903667211605 0.9477241200416 1.027871481401409 1.1172874671684576 0.9015392604257719 1.1637851808735813 0.9656172421799276 1.018494146517158 1.0658056931586977 0.9678881624493189 1.0 11.272749252242816 -5.344449760755294 2.1961318002912558 1.0322622679029445 0.750271918467354 0.4971884107725717 0.06922492186806 0.27624959774292807 1.7168362619973623 0.008324875663382213 0.14078324772121426 4.52428796330103e-06 5.344449760755294 -0.28199034943559054 T(ph)SPYGSSLDLSTGSSSRPPPK ddPTM_A549_PD325901_60min_R1 1 TSPYGSSLDLSTGSSSRPPPK 21 1 J3KNZ9 J3KNZ9 FBRS 1 T(0.5)S(0.5)PYGSSLDLSTGSSSRPPPK 104.81 3.5623e-10 13887000.0 2960.5 3509.2 3175.0 3471.3 3412.8 3173.9 3233.0 3304.9 3140.0 3268.8 3553.7 True False 3261.0477805950904 3804.932599538472 3390.4745928260004 3685.7143171057014 3173.09670152084 3148.0528107031923 3356.0335841654824 3238.9811768561076 3008.0367196441375 3062.407410143101 3116.617428760361 1.0463420214819812 1.2208532765126356 1.0878699969840593 1.1826008168643591 1.0181219780905042 1.010086378152398 1.0768192313871356 1.0392617159124395 0.9651607194023132 0.9826061363460892 1.0 11.605765356691673 -7.228750346424109 0.726287379666638 0.9865672744710828 1.1434695846246585 0.4797955997964036 0.05558239711611592 0.37866981177336684 0.38478785689415046 0.010032100210898487 0.028119057647823197 5.9054045397276536e-08 7.228750346424109 0.1569023101535757 T(ph)SPYILR ddPTM_A549_MK2206_60min_R1 1 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.5)S(0.5)PYILR 118.74 0.0072513000000000005 41150000.0 1366.2 1138.0 1261.3 1030.0 1922.9 1378.6 823.88 1226.0 2067.8 1707.9 2185.0 True False 1596.7811596169033 1195.9193392089983 1440.1713060259592 1282.3500462384566 1640.043957250227 1524.482536959382 973.5683315245426 1399.7892544675328 1599.4466015980713 1322.0842038119345 1642.4041970678184 0.9722217968436967 0.7281516580048146 0.8768677701853751 0.7807761624865756 0.998562936077608 0.9282018029916377 0.5927702408838534 0.8522806121456425 0.9738446872295875 0.8049688415143175 1.0 10.681593503948706 -8.762730524526088 4.976743402494726 0.9883130551762 0.8358705776531614 0.026256236021292456 0.12167172838511665 0.16874977531464105 11.27814210497985 0.018258441639073784 0.01997667138408548 1.7269090898042864e-09 8.762730524526088 -0.15244247752303863 T(ph)SPYILR ddPTM_A549_PD325901_60min_R1 2 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.716)S(0.284)PYILR;T(0.5)S(0.5)PYILR 117.72 0.0073866 125984000.0 2662.9 2639.2 2514.0 2569.8999999999996 3210.3 2305.48 2365.38 2677.8 2825.2 2948.1000000000004 3138.8999999999996 True False 2933.235647676629 2861.614646273204 2684.615157910099 2728.6368863336334 2984.819602933764 2286.704935259457 2455.395830285601 2624.389178306539 2706.46666889765 2761.9564628741073 2752.835199126515 1.0655326002106322 1.03951542292877 0.9752182617985767 0.9912096761910921 1.0842710830931175 0.8306726592224036 0.8919516253877846 0.953340461186804 0.9831560820482178 1.0033134071194987 1.0 11.426702528987299 -5.656983982319247 3.042484550274379 0.9769309447469723 1.0625917264053004 0.20974755382448662 0.06197380089683639 0.3348415367661197 5.882379165684195 0.00876030126875323 0.04479729462516446 2.203007713046244e-06 5.656983982319247 0.08566078165832813 T(ph)SQDYQALTVHDNLAMK ddPTM_A549_PD325901_60min_R1 1 TSQDYQALTVHDNLAMK 17 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 T(0.5)S(0.5)QDYQALTVHDNLAMK 75.956 0.00012027 4615700.0 2303.4 2554.5 2460.3 2901.8 3208.2 3105.3 2295.3 3650.9 3409.0 3126.7 3492.9 True False 2537.239472326543 2769.77668001853 2627.270752985768 3081.037595534044 2982.8670996891587 3080.0114663589356 2382.6488975363554 3578.0799354243577 3265.7315851168373 2929.279628394041 3063.295443317404 0.8282712259640332 0.9041820259488236 0.8576615614132727 1.0057918514700712 0.973744503226517 1.0054568758876972 0.7778057786538732 1.1680492468429575 1.066084432776815 0.9562510970935829 1.0 11.580868800816672 -5.817298744208103 0.43181952084498415 1.0331251316150356 0.7586541357823253 0.2654297602547073 0.09122332256877062 2.7932195727436406 0.46956594728363826 0.02071883125896196 0.35892464971804455 1.5230047428497461e-06 5.817298744208103 -0.2744709958327103 T(ph)SQETADVK ddPTM_A549_MK2206_60min_R1 2 TSQETADVK 9 0 H3BVG0;Q8N1F7;H3BNN5;H3BV11;H3BRI8;H3BM93 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 T(0.864)S(0.136)QETADVK;T(0.858)S(0.141)QETADVK 166.11 1.8994e-06 55059000.0 19058.300000000003 20550.1 19381.4 18177.0 28685.0 23244.0 20543.3 25375.0 30020.0 26982.0 26725.0 True False 22274.87510930085 21596.01231342605 22129.97395592764 22630.365815996523 24465.474498789725 25703.664651881554 24275.751693217637 28971.983957678345 23220.517932089224 20886.747460187147 20088.44492752285 1.1088401909488976 1.075046495203703 1.1016270316478167 1.126536468982277 1.2178879244789116 1.2795248584257202 1.2084435495530979 1.4422213397904335 1.1559141594019142 1.0397393892630562 1.0 14.29407826705596 -10.084154784526328 1.0960514305599847 1.0197189363470174 1.1900078376110936 0.3024634840127648 0.09884376094602212 0.4091528387915586 0.9859680799063381 0.037895161285890225 0.019902221719284886 8.238444407813177e-11 10.084154784526328 0.17028890126407625 T(ph)SQETADVK ddPTM_A549_PD325901_60min_R1 2 TSQETADVK 9 0 H3BVG0;Q8N1F7;H3BNN5;H3BV11;H3BRI8;H3BM93 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 T(0.5)S(0.5)QETADVK;T(0.5)S(0.5)QETADVK 152.96 1.8944e-05 64756000.0 20935.0 21501.4 21445.0 20822.9 24266.0 18924.0 18685.6 21243.0 22091.0 21745.0 23545.0 True False 23060.305788467555 23313.398437169875 22900.386659260952 22109.083240762924 22561.639873155404 18769.889218232205 19396.690733152653 20819.291700188878 21162.592093521864 20372.016988975087 20649.114264052303 1.1167697313105993 1.1290265596406612 1.1090251313649735 1.0707037095170835 1.0926202249959256 0.9089924622533757 0.9393473485165428 1.0082413915657793 1.0248668210608658 0.9865806701665838 1.0 14.333792278663164 -7.086562470091135 10.089330375321913 0.9992600434846977 1.1049005238109246 0.7356170151158902 0.03636382859844691 0.25461800577424887 28.499271410673817 0.005956700836536592 0.010327068890757744 8.19289765851525e-08 7.086562470091135 0.10564048032622697 T(ph)SQSEEEEAPR ddPTM_A549_MK2206_60min_R1 1 TSQSEEEEAPR 11 0 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 T(0.333)S(0.333)QS(0.333)EEEEAPR 51.727 0.025494 6710300.0 135.22 160.33 0.0 0.0 0.0 0.0 158.6 0.0 95.69200000000001 221.53 185.81 True False 158.04183018840402 168.490112175201 0.0 0.0 0.0 0.0 187.41556704834747 0.0 74.0179147887236 171.48621914073306 139.66824890488388 1.1315515976435906 1.206359451745867 0.0 0.0 0.0 0.0 1.3418623668431628 0.0 0.5299552000478712 1.2278110485763853 1.0 7.125860276708265 -10.262724132972428 0.719930204242626 0.9983706672999481 0.44375306958701216 0.17714823542854907 0.5158465973244056 1.119828372235205 1.0861531964628177 0.32989960472250207 0.10812157132192608 5.461046405983584e-11 10.262724132972428 -0.554617597712936 T(ph)SQTEAVNS ddPTM_A549_MK2206_60min_R1 2 TSQTEAVNS 9 0 Q86XZ4 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 1 T(0.5)S(0.5)QTEAVNS;T(0.498)S(0.498)QT(0.004)EAVNS 134.75 4.8679e-05 5590700.0 1215.4 1321.56 769.24 1103.8400000000001 1447.5 1043.5 1039.44 991.52 1434.85 1528.5 1645.94 True False 1420.5298063229277 1388.821759160848 878.3297989751914 1374.2808495532609 1234.5746674916556 1153.9224773807593 1228.292793270709 1132.0709964026496 1109.858765984618 1183.2107884106463 1237.2076723669581 1.1481741004768 1.1225453819760347 0.7099291562707648 1.1107923756438252 0.9978718165639361 0.93268293040338 0.992794355147189 0.9150209958178106 0.8970674776541733 0.9563558445664923 1.0 10.272871969897215 -7.147885598127861 5.5807847764386915 0.9495982397533405 1.0128237528504973 0.08450655522963746 0.11300089387918015 0.5521057040181118 23.694189018217653 0.01644740147685967 0.02876682241020244 7.114008862271463e-08 7.147885598127861 0.06322551309715685 T(ph)SQTEAVNS ddPTM_A549_PD325901_60min_R1 2 TSQTEAVNS 9 0 Q86XZ4 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 1 T(0.497)S(0.497)QT(0.006)EAVNS;T(0.493)S(0.493)QT(0.013)EAVNS 131.83 5.1251e-05 10421100.0 1794.1399999999999 1765.15 1769.0 1651.5 2226.1400000000003 1818.46 1353.69 2041.38 2118.1400000000003 1679.58 2328.37 True False 1976.27977202394 1913.9053852944626 1889.0549778611623 1753.509404171367 2069.783606166083 1803.6510646684924 1405.2054137175921 2000.6630744683691 2029.1219418302653 1573.5310321610843 2041.995250753514 0.9678180060872696 0.9372722020720737 0.9251025325176856 0.858723546748851 1.0136084329296626 0.8832787755029937 0.6881531253312461 0.9797589263393767 0.9936957204388706 0.7705850596765285 1.0 10.995763795479995 -8.495032501028334 24.99565637399262 0.9964811291482129 0.8967059833199771 0.0 0.10328315437190934 725.4221457275265 651162.7827567409 0.012661743731441421 0.01528880095352646 3.1986557249081367e-09 8.495032501028334 -0.09977514582823577 T(ph)SRDTS(ph)PSSGSAVSSSK ddPTM_A549_PD325901_60min_R1 1 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 T(0.566)S(0.433)RDT(0.191)S(0.72)PS(0.077)S(0.012)GS(0.001)AVSSSK 101.28 3.4958e-08 12408000.0 2515.2 2597.2 1862.0 2851.0 3108.3 2098.6 2462.7 2537.9 2764.7 2459.9 2628.8 True False 2770.541252407624 2816.075158874193 1988.3665171155951 3027.099794909212 2889.9837310528674 2081.5096973886125 2556.41939614115 2487.279593555965 2648.5092735032295 2304.5814941908407 2305.4742653361945 1.2017229140502297 1.221473256594144 0.8624544402908972 1.3130052416645766 1.2535311170048724 0.9028553164461706 1.1088475089824357 1.0788581034944924 1.1487915147545626 0.999612760307596 1.0 11.170847846538987 -7.228387462579727 24.984621270647512 1.065367361204371 1.164082969748187 0.1997429362686154 0.12428262051983052 1067.2763902734318 806776.3446816226 0.018227242982841993 0.03156916733265605 5.9103409861826256e-08 7.228387462579727 0.09871560854381589 T(ph)SRDTSPSSGSAVSSSK ddPTM_A549_MK2206_60min_R1 2 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 1 T(0.406)S(0.406)RDT(0.075)S(0.075)PS(0.036)S(0.001)GSAVSSSK;T(0.405)S(0.405)RDT(0.083)S(0.083)PS(0.021)S(0.003)GSAVSSSK 83.395 5.8828e-05 6372300.0 2279.3 2285.2 2107.2 1811.85 2559.3 1683.01 1527.58 1567.72 2143.2 2896.3 2976.2 True False 2663.990116465236 2401.5069191216207 2406.032645728932 2255.753331337037 2182.830360284209 1861.1050011083773 1805.1215126842037 1789.9491109411424 1657.7686219871298 2242.023818432291 2237.1274010586912 1.1908084068902547 1.073477942286675 1.0755009502768187 1.0083258245683866 0.9757291244348503 0.8319173061970605 0.8068925854781241 0.8001104944197959 0.7410255764614088 1.0021887074340436 1.0 11.127431702722903 -6.616940927158744 1.222118623642679 0.8601826276442244 1.127480203117512 0.6371657655679743 0.0809266849001217 0.2873191871959766 0.8286335652359526 0.015875780537776083 0.05172459184997516 2.4157894083620786e-07 6.616940927158744 0.2672975754732876 T(ph)SSASRPASLPR ddPTM_A549_PD325901_60min_R1 1 TSSASRPASLPR 12 1 Q69YQ0-2;Q69YQ0;A0A494C1J1 Q69YQ0-2 SPECC1L Cytospin-A 1 T(0.314)S(0.314)S(0.314)AS(0.058)RPASLPR 69.729 0.0013709000000000002 16419000.0 3329.1 2921.7 2945.8 3270.7 4090.7 3105.3 3103.6 3258.0 3434.3 3635.4 3728.0 True False 3667.0677812461126 3167.92191270704 3145.7197025344353 3472.7237107013552 3803.383344148882 3080.0114663589356 3221.709196355085 3193.016634148444 3289.9683140999537 3405.860223578754 3269.4796337390944 1.1216059410201378 0.9689376498987672 0.9621469025445121 1.0621640443527778 1.1632992923094603 0.9420494425397364 0.9853889784505624 0.9766130980595207 1.006266648719701 1.0417132403677614 1.0 11.674845321130555 T(ph)SSDPNLNNHCQEVR ddPTM_A549_MK2206_60min_R1 1 TSSDPNLNNHCQEVR 15 0 J3QR65;Q9NYA4 J3QR65 MTMR4 Myotubularin-related protein 4 1 T(0.333)S(0.333)S(0.333)DPNLNNHCQEVR 103.5 5.4183e-06 6888700.0 249.83 362.54 267.37 414.22 542.87 335.98 211.27 283.0 538.38 345.76 685.27 True False 291.9951962429298 380.9917374664588 305.2870864125592 515.7039185950422 463.0145421355406 371.53318059452585 249.65502427682455 323.1161166511515 416.4377896161959 267.652575859251 515.0985465101439 0.5668724911402551 0.7396482479861858 0.592677048850005 1.0011752548886028 0.8988853594569838 0.7212856318692974 0.48467429381866456 0.6272899017873433 0.8084623659639757 0.5196143100628611 1.0 9.00870465888744 -9.739939645495179 0.9856042808157812 0.9694044189229234 0.7160596504019493 0.0 0.19628874876158667 0.4057376400579649 0.8150447039036063 0.048491449595913005 0.030217074135797637 1.8199537625279227e-10 9.739939645495179 -0.2533447685209741 T(ph)SSDPNLNNHCQEVR ddPTM_A549_PD325901_60min_R1 2 TSSDPNLNNHCQEVR 15 0 J3QR65;Q9NYA4 J3QR65 MTMR4 Myotubularin-related protein 4 1 T(0.333)S(0.333)S(0.333)DPNLNNHCQEVR;T(0.352)S(0.352)S(0.295)DPNLNNHCQEVR 105.38 4.6118000000000005e-06 17531500.0 892.7 950.52 1080.06 873.34 1161.28 989.04 935.07 982.27 759.78 1135.97 1099.62 True False 983.3262468289938 1030.6236562502295 1153.3593665283931 927.284228300952 1079.7156989985122 980.985586155167 970.6546005399376 962.6778542740919 727.8490888061218 1064.2446603341475 964.3737110655 1.0196526881083827 1.068697377815839 1.195967241012916 0.9615403423600493 1.119602998930337 1.0172255577884979 1.006512920667962 0.9982414941718659 0.7547375881928065 1.1035604228139981 1.0 9.913448513224107 -8.536353109230976 22.700143649505296 0.8837767315430712 1.0548352158666454 0.06849301439940647 0.10289463616234823 60.76170086417113 102363.69907636395 0.017199736414127996 0.019510790656630642 2.908351480451754e-09 8.536353109230976 0.17105848432357418 T(ph)SSEEEDSRR ddPTM_A549_MK2206_60min_R1 2 TSSEEEDSRR 10 1 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.403)S(0.403)S(0.195)EEEDSRR;T(0.392)S(0.392)S(0.217)EEEDSRR 119.39 3.6429e-05 12802800.0 1356.35 1660.7199999999998 1374.95 1586.47 596.0 283.4 240.23000000000002 390.122 497.16999999999996 2388.2 2138.85 True False 1585.2687204262807 1745.2435544913608 1569.9385849682026 1975.1552212193446 508.3291895164261 313.3891998943051 283.8766814125127 445.4229881985176 384.5617888173484 1848.7039613230647 1607.7145157430227 0.986038693376872 1.0855431965076072 0.9765033341399163 1.2285484779034326 0.31618125266568003 0.19492838860727016 0.17657157326922313 0.27705353396816257 0.23919780847386263 1.149895670668039 1.0 10.650795532418032 -6.759196092436793 24.999950889977168 0.5163138075280126 1.0637105822389108 0.4503868092163982 0.3118085268954191 52.447015010540966 584473.4021799898 0.0513741305321042 0.10301717020286062 1.7410205911093173e-07 6.759196092436793 0.5473967747108982 T(ph)SSEEEDSRR ddPTM_A549_PD325901_60min_R1 1 TSSEEEDSRR 10 1 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.379)S(0.379)S(0.241)EEEDSRR 58.172 0.0072402000000000005 14911000.0 481.68 574.29 417.04 481.14 804.08 437.91 497.71 377.61 441.8 615.4 529.82 True False 530.5797990059252 622.6874337709299 445.34284226524545 510.8589250517778 747.6041947254093 434.3438061485977 516.6506264073626 370.07827232068576 423.23268240088504 576.5435389751792 464.65549880569944 1.141877800584886 1.3401055951590346 0.9584366125224103 1.0994358753201774 1.6089429623602236 0.9347652341680844 1.111900381541391 0.7964573178879732 0.9108526284284095 1.2407978393822192 1.0 8.860017670804538 T(ph)SSEEEDSRREEPSLLLVLK ddPTM_A549_MK2206_60min_R1 4 TSSEEEDSRREEPSLLLVLK 20 2 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.329)S(0.329)S(0.329)EEEDS(0.012)RREEPS(0.001)LLLVLK;T(0.333)S(0.333)S(0.333)EEEDS(0.002)RREEPSLLLVLK;T(0.331)S(0.331)S(0.331)EEEDS(0.007)RREEPSLLLVLK;T(0.333)S(0.333)S(0.333)EEEDS(0.002)RREEPSLLLVLK 77.649 0.00010051 45106100.0 863.88 1022.61 990.25 683.18 1389.0400000000002 1194.13 995.35 875.04 1555.63 1283.65 1370.51 True False 1009.6818241617992 1074.6564810795378 1130.6823402776542 850.5591306691153 1184.7140560501618 1320.4920440006576 1176.1922109809132 999.0795996976094 1203.2822888306443 993.6725734663568 1030.1745428482454 0.9801075275750966 1.0431790307187245 1.0975638527734561 0.825645650607395 1.1500129412775457 1.281813895681927 1.141740707093145 0.9698158497834123 1.1680372973533082 0.9645671991845505 1.0 10.008673079126963 T(ph)SSEEEDSRREEPSLLLVLK ddPTM_A549_PD325901_60min_R1 2 TSSEEEDSRREEPSLLLVLK 20 2 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.331)S(0.331)S(0.331)EEEDS(0.005)RREEPS(0.001)LLLVLK;T(0.333)S(0.333)S(0.333)EEEDSRREEPSLLLVLK 98.70299999999999 2.099e-07 66519000.0 1215.24 1450.53 1335.63 1409.81 1652.6 1779.0900000000001 1657.71 1845.12 1606.3400000000001 1685.07 2037.75 True False 1338.610270187595 1572.771253735477 1426.2738835956507 1496.8907617891812 1536.5270771604967 1764.6016808954098 1720.7950611837196 1808.3176341313624 1538.831115997823 1578.674392624154 1787.1196683615447 0.7490322522245255 0.8800592828668351 0.7980852703072077 0.8375996237350747 0.8597785052464927 0.9873998435220739 0.9628874281045586 1.0118615256410066 0.8610677523395196 0.8833624410118568 1.0 10.803420527419405 -7.058814260244635 3.7696502053430767 0.9449048788086127 0.8211230234477621 0.5955923819357472 0.05235423285848931 0.1575246417004507 4.47371352056866 0.008993158184448789 0.01646372633171807 8.733448020222635e-08 7.058814260244635 -0.12378185536085062 T(ph)SSESIYSR ddPTM_A549_PD325901_60min_R1 1 TSSESIYSR 9 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.725)S(0.267)S(0.008)ESIYSR 82.445 0.0016029 9012600.0 11203.0 7312.6 8659.3 8148.5 8176.4 7705.2 6914.8 6416.0 8230.3 10522.0 9712.5 True False 12340.320312787288 7928.858465571936 9246.972170601002 8651.814338413797 7602.117871048699 7642.451405850921 7177.946497923752 6288.027846745367 7884.409112639212 9857.639124304249 8517.924072610234 1.4487473952096073 0.9308439941449508 1.0855898798552401 1.0157186498332489 0.8924848127601477 0.8972199494505434 0.8426873069935854 0.7382113051423882 0.9256256624770679 1.1572818729391976 1.0 13.056286154658709 -2.88922088916097 1.2298535268240722 0.9363162926889304 199.9999996012715 0.613451885230078 0.11232063422594574 255.9388828971232 1.2541287715786122 0.014127889166599317 142758.57115805973 0.0012905627057008759 2.88922088916097 199.06368330858257 T(ph)SSGTKPSVKPTSATK ddPTM_A549_MK2206_60min_R1 1 TSSGTKPSVKPTSATK 16 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0 Q14966-3 ZNF638 Zinc finger protein 638 1 T(0.329)S(0.329)S(0.329)GT(0.014)KPSVKPTSATK 48.111999999999995 0.0086744 6111800.0 880.62 1314.2 1241.9 778.95 1593.3 1315.9 1325.6 905.48 1739.3 1540.2 1852.0 True False 1029.2471269080932 1381.0871665979485 1418.0200943103455 969.7927849683942 1358.9276806317482 1455.1476645762737 1566.44436115567 1033.8345629162009 1345.3513270913645 1192.2677502846434 1392.0972874002737 0.739349998181665 0.9920909832222383 1.018621404656626 0.6966415305495434 0.9761729247885618 1.0452916457396062 1.1252405814833442 0.7426453397139187 0.9664204788472746 0.8564543305096085 1.0 10.443044322820981 -6.945564979445464 24.99995387891038 0.980489954870996 0.8764773435776334 0.0985098671063962 0.1287710332446503 139.0892699845148 63877.58983302193 0.01702362207909732 0.032171620195609096 1.133535225080258e-07 6.945564979445464 -0.10401261129336259 T(ph)SSISGPLSPAYTGQVPYNYNQLEGR ddPTM_A549_MK2206_60min_R1 1 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 T(0.323)S(0.323)S(0.323)IS(0.028)GPLS(0.004)PAYTGQVPYNYNQLEGR 54.466 0.0047135 11054000.0 624.68 414.59 397.42 487.98 928.42 537.99 578.46 825.03 846.9 866.64 721.17 True False 730.1107120403209 435.6908601429339 453.7801319597531 607.5351219062544 791.8506478705372 594.9197447111403 683.5586942924784 941.9805290484084 655.0785022213978 670.8654220923796 542.0835857205484 1.3468600254144258 0.8037337259784483 0.8371036200193729 1.1207406715676633 1.4607537817585703 1.0974686568315124 1.2609839373458955 1.737703472050918 1.208445559831247 1.2375682270486974 1.0 9.082371512584599 -6.508726800764027 23.730688115908297 1.1870444357296908 0.9770557870150284 0.1546295033590397 0.23664542974906416 571.5158028322055 958343.2878692419 0.03592619626174525 0.08049814843530306 3.099368388689898e-07 6.508726800764027 -0.20998864871466238 T(ph)SSISGPLSPAYTGQVPYNYNQLEGR ddPTM_A549_PD325901_60min_R1 3 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 T(0.36)S(0.36)S(0.266)IS(0.014)GPLSPAYTGQVPYNYNQLEGR;T(0.329)S(0.329)S(0.329)IS(0.014)GPLSPAYTGQVPYNYNQLEGR;T(0.345)S(0.345)S(0.294)IS(0.015)GPLSPAYTGQVPYNYNQLEGR 224.9 3.551199999999999e-95 29950700.0 3335.55 3840.7 3577.6000000000004 3775.7 3918.2 4011.4 3410.83 3983.4 4537.9 3779.5999999999995 4664.1 True False 3674.1725804978737 4164.369267937825 3820.397449856474 4008.9164137631437 3642.99914905619 3978.7324883754327 3540.6310021277923 3903.9479620831517 4347.187843972333 3540.9554109694263 4090.4452681659122 0.8982329158862726 1.018072360079532 0.9339808258990535 0.9800684646639155 0.8906118796914377 0.9726893351538304 0.8655857174481526 0.9544066002950375 1.062766412694611 0.8656650263791775 1.0 11.998042181914654 -8.660360107434888 6.3291157527182635 1.029502545995422 0.9392691793005299 0.0 0.0656317449528429 0.1360553477031353 7.409519250087883 0.00738423720219617 0.008364597506316445 2.185948331991481e-09 8.660360107434888 -0.09023336669489201 T(ph)SSKES(ph)SPIPSPTSDRK ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.935)S(0.162)S(0.15)KES(0.453)S(0.287)PIPS(0.011)PT(0.001)S(0.001)DRK 47.808 0.011609 68386000.0 4183.1 3482.7 5036.6 4422.5 4700.5 4807.2 4349.1 4564.6 5044.4 5198.7 5797.9 True False 4607.7652325645395 3776.1993515367108 5378.413963536196 4695.667780773763 4370.353095844678 4768.051757022081 4514.607380418838 4473.555472140572 4832.401410373529 4870.45319478431 5084.795055916283 0.9061850442139832 0.742645339686407 1.0577444920377432 0.9234723777726773 0.8594944432931797 0.9377077550990648 0.8878641775671927 0.8797907138726234 0.9503630642401039 0.9578465092939034 1.0 12.311973911690442 -9.302666384774252 0.973689885284682 0.9895814869713702 0.8992914219603463 0.14965873619620484 0.07141967229075659 0.5020993543560711 1.0044005852988396 0.01834846114560868 0.014610360417949548 4.981195822755462e-10 9.302666384774252 -0.09029006501102388 T(ph)SSKSEAGAR ddPTM_A549_MK2206_60min_R1 1 TSSKSEAGAR 10 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 T(0.333)S(0.333)S(0.333)KS(0.001)EAGAR 45.28 0.018888 56721000.0 2246.2 2187.8 1882.2 1184.6 3196.0 2495.5 2613.6 3201.7 3920.9 4858.8 4851.2 True False 2625.3036456825407 2299.1496751506565 2149.1242624292872 1474.8270531787148 2725.872633715599 2759.5721536211668 3088.457289013627 3655.550779795024 3032.8224103906928 3761.193705416845 3646.513153691257 0.7199490403661437 0.6305063435252649 0.5893641876085906 0.40444857622021496 0.7475285344730703 0.7567701081313073 0.8469617848182649 1.0024784295909144 0.8317047772940726 1.0314493728370349 1.0 11.832301882844474 -7.471163845810153 1.491930658574995 0.9241031097607528 0.5954500540146939 0.7268320435230567 0.09626678000722741 0.16688412791311905 0.7377521901390816 0.016190930805180834 0.02891832348129885 3.379373189060029e-08 7.471163845810153 -0.32865305574605896 T(ph)SSLDTLAAPYLAGHWPR ddPTM_A549_PD325901_60min_R1 2 TSSLDTLAAPYLAGHWPR 18 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.326)S(0.326)S(0.326)LDT(0.022)LAAPYLAGHWPR;T(0.35)S(0.35)S(0.284)LDT(0.017)LAAPYLAGHWPR 102.39 6.2224e-09 11342200.0 1054.17 1070.75 1100.8600000000001 1063.8700000000001 1368.54 1223.87 1026.21 1237.1 1517.13 1259.51 1157.48 True False 1161.188562361063 1160.9858602974516 1175.5709796089538 1129.5828336759262 1272.4184716066966 1213.9032084928049 1065.2629831136592 1212.425070013825 1453.3703020616908 1179.984323650679 1015.1172978702592 1.143895946603673 1.143696263213353 1.1580641784701438 1.1127608957564001 1.2534694012960488 1.195825557341603 1.0493989072480656 1.1943694315499522 1.431726466597404 1.1624117982486506 1.0 9.987430726632427 -6.743222985638324 24.861584721732967 1.1978819342372626 1.1412151708879494 0.028884578051616927 0.10503648217013727 870.8081522705585 1188464.898219277 0.022469114865347556 0.04670060978713762 1.8062464825376568e-07 6.743222985638324 -0.0566667633493132 T(ph)SSPHKEESPK ddPTM_A549_PD325901_60min_R1 2 TSSPHKEESPK 11 1 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.351)S(0.351)S(0.298)PHKEESPK;T(0.333)S(0.333)S(0.333)PHKEESPK 59.898 0.0034076 20297500.0 3892.7999999999997 3568.9 3554.5 3488.5 4072.2 3827.5 3134.6 3727.1 4088.4 4581.4 4850.1 True False 4287.994190272106 3869.6637280556415 3795.7297449448874 3703.976722041665 3786.1827203273447 3796.3301090035798 3253.8889183189344 3652.760066646613 3916.578765793979 4292.129622133382 4253.568447317058 1.0080933793311266 0.909745258830015 0.8923636217348395 0.8707927867901014 0.8901191475396342 0.8925047653572187 0.7649786193922253 0.858751918980073 0.9207748304284054 1.009065605806966 1.0 12.054457954420972 -9.753909031723579 1.0231074915907759 0.986818309359788 0.8851469592446984 0.38676458232208977 0.05479361289432943 0.36568806201216314 0.7882982292125753 0.017750562128037453 0.011157634385654838 1.7623451524412959e-10 9.753909031723579 -0.10167135011508954 T(ph)SSPHKEESPKK ddPTM_A549_PD325901_60min_R1 2 TSSPHKEESPKK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.333)S(0.333)S(0.333)PHKEESPKK;T(0.348)S(0.348)S(0.302)PHKEES(0.001)PKK 47.201 0.012412999999999999 24842000.0 3855.8999999999996 3899.3 3784.2999999999997 4209.7 4600.9 4725.1 3052.6000000000004 4325.1 4824.4 4949.6 5384.1 True False 4247.348129436447 4227.907695594539 4041.1253548445466 4469.723608077629 4277.748656243329 4686.62035220191 3168.7683634468135 4238.832487524689 4621.647245302922 4637.081411295982 4721.889832621962 0.8995017418858304 0.8953846543359261 0.8558279625512987 0.9465963346280972 0.9059399536790946 0.9925306430962477 0.6710805367704366 0.8976983025398028 0.9787706636807793 0.9820393053772524 1.0 12.205148666808046 -8.75760357843265 4.78902182695058 0.9904869574602129 0.8814944230241788 0.27434464786461066 0.07560848678645195 0.1701611986241015 10.0447888311905 0.012760895661659062 0.013998028602038203 1.7474164571155477e-09 8.75760357843265 -0.10899253443603407 T(ph)SSPIPAQHAPRPYASSLEK ddPTM_A549_MK2206_60min_R1 2 TSSPIPAQHAPRPYASSLEK 20 1 H0YKX0;Q96EP0-3;Q96EP0 H0YKX0 RNF31 E3 ubiquitin-protein ligase RNF31 1 T(0.346)S(0.346)S(0.308)PIPAQHAPRPYASSLEK;T(0.349)S(0.349)S(0.302)PIPAQHAPRPYASSLEK 68.445 0.00067286 12708100.0 1890.83 2120.0 2786.9 2329.9 3694.5 2375.79 2805.7 2875.4 4377.2 3925.4 3970.3999999999996 True False 2209.9558776448753 2227.898944747872 3182.1243263012348 2900.725604593187 3151.0439440745567 2627.194520878234 3315.459372430951 3282.9967555431826 3385.7711889520647 3038.649413691301 2984.440102534584 0.7404926223072912 0.7465048277751638 1.066238294948109 0.9719496806552421 1.0558241532133554 0.8802972854596902 1.1109150321412862 1.1000377433459108 1.1344744986091841 1.0181639802757907 1.0 11.543244583970504 -5.759442604596026 24.95432532913513 1.0515891990008355 0.7434985885929888 0.7270517085396474 0.06905166896360702 19.062890854915498 238215.29683835086 0.010480396468427897 0.036908536354661244 1.7400326417321662e-06 5.759442604596026 -0.3080906104078467 T(ph)SSPIPAQHAPRPYASSLEK ddPTM_A549_PD325901_60min_R1 1 TSSPIPAQHAPRPYASSLEK 20 1 H0YKX0;Q96EP0-3;Q96EP0 H0YKX0 RNF31 E3 ubiquitin-protein ligase RNF31 1 T(0.333)S(0.333)S(0.333)PIPAQHAPRPYASSLEK 46.662 0.010464 11015000.0 2532.9 2849.8 2429.2 2505.8 3110.0 3009.8 2743.8 3452.1 2684.2 3418.5 3276.8 True False 2790.0381433775706 3089.962647373969 2594.0601199662724 2660.5775749152967 2891.5643289175505 2985.28918669601 2848.2168104649695 3383.2451573799412 2571.392408556941 3202.655326595139 2873.7743733466395 0.9708619330920004 1.0752279914639118 0.9026665920697778 0.9258129655519666 1.0061904496525222 1.0388043036306662 0.9911066216197387 1.1772828057618177 0.894778808108877 1.114442162300133 1.0 11.488731081588913 T(ph)SSPPRK ddPTM_A549_MK2206_60min_R1 1 TSSPPRK 7 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.333)S(0.333)S(0.333)PPRK 60.59 0.017703 185960000.0 9197.2 6505.0 4545.1 3612.4 7681.0 5875.5 6223.9 6122.6 6552.0 9723.4 10421.0 True False 10749.46251004874 6836.076714898537 5189.6635241564945 4497.438162166799 6551.135074959175 6497.241510158751 7354.702066533482 6990.497299676119 5067.982461394023 7526.877186805414 7833.178095031455 1.3722990055424718 0.8727079394804805 0.6625233667862437 0.5741524203336448 0.8363316900856022 0.8294515241878541 0.9389167432818274 0.8924215963007602 0.6469893062445009 0.9608969814665229 1.0 12.935382044501866 -8.165633746641294 0.004080341841948557 1.6766419473093248 4.228603709442882e-05 0.0 0.20866834747549584 99666.88121042584 267.1565667128638 54650.188637697865 55113.37567686996 6.829143732172786e-09 8.165633746641294 -1.6765996612722305 T(ph)SSPPRK ddPTM_A549_PD325901_60min_R1 2 TSSPPRK 7 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.367)S(0.367)S(0.265)PPRK;T(0.368)S(0.368)S(0.264)PPRK 75.38 0.011212999999999999 517330000.0 14088.1 13845.2 11937.2 10126.8 12724.2 8447.7 7099.799999999999 8543.2 11275.2 15318.3 19413.1 True False 15518.313540888928 15011.98359373362 12747.330176214968 10752.309436368512 11830.496088106976 8378.90473202601 7369.986774159629 8372.799173989255 10801.3425545642 14351.09992376257 17025.411769780167 0.911479484357241 0.8817398249585746 0.7487237518003104 0.6315447509735823 0.6948728317458917 0.4921410915240495 0.43288155809783335 0.49178247711170425 0.6344247469970982 0.8429223397248777 1.0 14.055402070652343 -10.561425578212477 0.9641074770799021 0.9905788509391205 0.6537502733607485 0.2943945171999226 0.15135390006289323 0.4390547987495407 0.7575760829351738 0.09514744928912444 0.029583623385178615 2.745202727972731e-11 10.561425578212477 -0.3368285775783719 T(ph)SSPRSPPSSSEIFTPAHEENVR ddPTM_A549_MK2206_60min_R1 1 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 T(0.263)S(0.263)S(0.263)PRS(0.202)PPS(0.003)S(0.003)S(0.003)EIFTPAHEENVR 88.595 6.7553e-07 49824000.0 446.42 932.08 636.86 715.86 697.96 754.93 494.43 319.77 689.7 841.66 944.43 True False 521.7647820788889 979.5188907644323 727.1763243920495 891.2457321361768 595.2910085820213 834.8161915180228 584.2615309944163 365.0983767545537 533.4840512245815 651.5284214417435 709.9019660580133 0.7349814580401517 1.3797945879817242 1.024333442024338 1.255449026412957 0.8385538243929501 1.1759598246411977 0.8230172036834031 0.514294077507482 0.751489750319955 0.9177723863191845 1.0 9.471475999114443 -7.77364327780442 24.553407771033292 0.8421145985470149 1.0784248791347173 0.28856048269130685 0.2037796339277744 203.99008967208653 410413.37422412704 0.032322996064243194 0.044846572375982566 1.6840567490725513e-08 7.77364327780442 0.23631028058770243 T(ph)SSPRSPPSSSEIFTPAHEENVR ddPTM_A549_PD325901_60min_R1 1 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 T(0.286)S(0.286)S(0.245)PRS(0.18)PPS(0.001)S(0.001)S(0.001)EIFTPAHEENVR 111.43 4.8499e-11 79812000.0 3886.1 3381.9 4106.6 4183.5 4855.8 4046.2 3940.1 5290.1 4060.3 4809.8 5388.6 True False 4280.614011204381 3666.904581779083 4385.298570991892 4441.905293582144 4514.745359600591 4013.249088713333 4090.0426616054497 5184.584805496834 3889.659711073596 4506.108407154399 4725.836361149807 0.9057897235703053 0.7759271167161015 0.9279412649668933 0.9399194034939918 0.9553325622350035 0.8492145690243282 0.8654643007169915 1.0970724352874994 0.8230627160622279 0.9535049592910687 1.0 12.206353959457354 -8.79623241989471 0.011134070311391173 1.8275933103815631 4.403468093148931e-07 0.11309208845102925 0.07973949915912776 1470.0853086939364 12.796686055360174 1054.349216133084 1044.5783428722182 1.598702227625655e-09 8.79623241989471 -1.827592870034754 T(ph)SSRESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNK ddPTM_A549_PD325901_60min_R1 2 TSSRESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNK 41 2 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 T(0.246)S(0.246)S(0.246)RES(0.246)LNRLDLDS(0.005)S(0.005)T(0.005)AS(0.001)FDPPSDMDSEAEDLVGNSDSLNK;T(0.193)S(0.193)S(0.193)RES(0.193)LNRLDLDS(0.057)S(0.057)T(0.057)AS(0.057)FDPPSDMDSEAEDLVGNSDSLNK 61.736999999999995 9.452799999999999e-05 8724100.0 961.24 1356.29 1458.53 1458.1100000000001 1445.8600000000001 1201.17 1319.6100000000001 906.02 1304.29 1390.48 1407.57 True False 1058.8243771725126 1470.5893182001694 1557.5146166533882 1548.1741430919242 1344.3077815462152 1191.3880697666439 1369.828480668299 887.94872034106 1249.4752270906538 1302.684855499199 1234.4478133213895 0.8577311780590006 1.191293226275334 1.2617095675051335 1.2541430479158342 1.0889952309358772 0.9651182147272069 1.1096690081880871 0.7193084314775176 1.0121733892734046 1.0552773810617493 1.0 10.26965013203476 -7.075602915270393 4.4029733312330155 0.9885322297513696 1.1555128817994884 0.24067500807501208 0.1362474681401843 0.23725774615138423 8.600746420115517 0.019166037440736455 0.034334702546134827 8.402278737262784e-08 7.075602915270393 0.16698065204811885 T(ph)SSSETEEKKPEKPLILQSLGPK ddPTM_A549_MK2206_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 T(0.226)S(0.226)S(0.226)S(0.146)ET(0.177)EEKKPEKPLILQSLGPK 69.57600000000001 8.9149e-05 96435000.0 2112.0 2723.5 2798.6 2715.7 4294.8 3481.5 2756.7 2546.8 4803.4 4430.4 4394.9 True False 2468.453966557532 2862.114516990957 3195.483562232815 3381.0466219124073 3663.0406092871576 3849.9100191673356 3257.556706697224 2907.816699247888 3715.4375694536075 3429.569562953568 3303.5250369305945 0.7472181802657224 0.866381966231512 0.9672950943340922 1.0234663228264316 1.1088278636721336 1.1653945334539992 0.9860850667939598 0.8802163345944032 1.1246887878609007 1.038154554487677 1.0 11.689790563392329 -5.625938131576373 1.4084491428014467 1.0517470545876504 0.7183559919614703 0.6149857254206723 0.07326105537224921 0.3561508266919818 0.9787502974502819 0.01170757836821637 0.13812114442386159 2.3662567640496988e-06 5.625938131576373 -0.3333910626261801 T(ph)SSSETEEKKPEKPLILQSLGPK ddPTM_A549_PD325901_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 T(0.291)S(0.291)S(0.291)S(0.06)ET(0.068)EEKKPEKPLILQSLGPK 77.322 2.1552e-05 200900000.0 3947.0 3876.9 4680.5 4674.6 5340.7 4660.5 5088.1 5676.1 5469.1 5823.9 5333.4 True False 4347.696534372174 4203.619968981734 4998.1468761329415 4963.339425213125 4965.587656414777 4622.546433183849 5281.730429815157 5562.885732685691 5239.252746307562 5456.177960087006 4677.425611208179 0.9295062916562694 0.8987037568077836 1.0685679028558446 1.0611263198542016 1.061606975537162 0.9882672259088788 1.1291960297901746 1.1893050141419133 1.1201146061528198 1.1664916587904164 1.0 12.191498993992507 -5.764820417704634 24.985036740079256 1.06809622183322 0.914104993228489 0.5190258815100413 0.06207576828210359 52.153066063170854 385413.3946859681 0.009054799515531972 0.029924318698296842 1.7186188952049815e-06 5.764820417704634 -0.1539912286047309 T(ph)SSTDEVLSLEEKDLR ddPTM_A549_MK2206_60min_R1 1 TSSTDEVLSLEEKDLR 16 1 K7ENH8;A0A0A0MRB7;P15923-2;K7EMM4 K7ENH8 TCF3 Transcription factor E2-alpha 1 T(0.339)S(0.339)S(0.312)T(0.009)DEVLS(0.001)LEEKDLR 48.111999999999995 0.009944 2444500.0 427.13 627.39 491.57 503.86 753.32 711.43 237.89 188.32 782.16 929.14 829.95 True False 499.21910167410897 659.3214712006447 561.2820176826933 627.3057226191352 642.50762591697 786.7130503909862 281.1115337019633 215.0149367058122 605.0020088528614 719.2466286842447 623.8505095452799 0.8002223193469636 1.056858111218374 0.8997059537417188 1.0055385272929789 1.029906389569657 1.2610602032919962 0.45060720381051456 0.34465778806934855 0.9697868312936748 1.1529150296094144 1.0 9.285056553837364 T(ph)SSTLDSEGTFNSYR ddPTM_A549_MK2206_60min_R1 1 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.866)S(0.133)STLDSEGTFNSYR 241.41 1.3076e-64 9268000.0 2229.1 2573.5 2234.4 1801.8 2908.3 1880.3 1970.8 1934.9 2894.8 2197.8 2553.5 True False 2605.317583737401 2704.4801576927557 2551.271518420996 2243.241080885875 2480.492922601714 2079.2720979578758 2328.8688495515967 2209.178000382731 2239.1324220456977 1701.3154535616093 1919.3954769852046 1.3573636152511803 1.409027055716878 1.3292057572357519 1.1687227086777003 1.2923302947956432 1.083295299426145 1.2133345511522993 1.1509759332415892 1.1665821082181063 0.88638088083539 1.0 10.90643628327316 -2.0000000000115374 0.10282001634403289 0.9007788965243936 2.3498334732584385 0.7718372596908979 0.07179048230207412 33.30029251150731 0.2339504580490435 0.35101423780291097 6.8473449147841405 0.009999999999734341 2.0000000000115374 1.4490545767340448 T(ph)SSTLDSEGTFNSYR ddPTM_A549_PD325901_60min_R1 1 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.834)S(0.158)S(0.005)T(0.003)LDSEGTFNSYR 207.06 1.3645e-39 8160900.0 3503.2 3730.6 4125.0 3880.0 4788.7 4111.8 3983.7 4418.9 4199.5 4938.5 5080.2 True False 3858.8422850804627 4044.9907545418387 4404.947305640081 4119.658787880657 4452.358232118159 4078.314864062945 4135.301883464287 4330.7615729400095 4023.009619154636 4626.682267190317 4455.367606041136 0.8661108636351732 0.9078915843121771 0.9886832457252934 0.9246507027376857 0.9993245509261915 0.9153711263988775 0.9281617700539762 0.9720323788923342 0.9029579542886077 1.038451296570207 1.0 12.1213287560351 -8.169997483546641 0.007505992131766139 1.883043452023284 4.2866494077608955e-07 0.293896048437187 0.042453327424507 2664.327351375562 13.203117919462878 1642.91079071016 1668.3341854849075 6.760868928633614e-09 8.169997483546641 -1.883043023358343 T(ph)STFER ddPTM_A549_PD325901_60min_R1 1 TSTFER 6 0 Q9H329-2;Q9H329 Q9H329-2 EPB41L4B Band 4.1-like protein 4B 1 T(0.953)S(0.045)T(0.002)FER 79.71300000000001 0.045868 3632500.0 899.87 1079.4 879.05 1035.8 1124.0 891.89 908.69 1174.4 1024.9 1083.4 992.87 True False 991.224139950719 1170.3648261546302 938.7076191570688 1099.7790135275206 1045.0541175894944 884.6267435451874 943.2706952042478 1150.9756707010222 981.8270171857571 1014.9939391057992 870.7532843214956 1.138352456198998 1.3440831602106407 1.0780408596316973 1.2630202301039672 1.2001724672262553 1.0159327096130362 1.0832812372786613 1.3218160544727433 1.1275605098071055 1.1656504286362792 1.0 9.766120199177763 -14.999999999994449 0.1384801588150216 0.35397368986394717 1.2419943952081167 0.0 0.11059665968560461 56.73985573718846 0.529206762947688 9.940386375834906 0.2346532292552707 1.000000000012782e-15 14.999999999994449 0.8880207053441695 T(ph)STSDLSR ddPTM_A549_MK2206_60min_R1 1 TSTSDLSR 8 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.497)S(0.497)T(0.005)SDLSR 115.82 0.0013751 7584500.0 909.19 1023.2 673.65 821.4 1337.5 1343.6 1003.4 1291.6 1640.5 1196.8 1657.5 True False 1062.6390444386557 1075.2765095594448 769.1836995991338 1022.6430368740467 1140.7555217755364 1485.7788601905022 1185.7047917800248 1474.6882553591072 1268.9293693401862 926.442048786301 1245.8970053271887 0.8529108264126479 0.8630540927233895 0.6173734235737537 0.8208086483083628 0.9156098111624879 1.1925374680552485 0.9516876489069362 1.1836357652788763 1.0184865714537525 0.7435944101519093 1.0 10.282969094560695 -6.894700343457745 3.37077283078672 1.030898204447592 0.7804366112262195 0.398890446578417 0.1282613962656273 0.12210021046713998 2.7420974724480747 0.013315908118296537 0.026442398943728254 1.2743820818553697e-07 6.894700343457745 -0.2504615932213725 T(ph)SVAGTVR ddPTM_A549_MK2206_60min_R1 1 TSVAGTVR 8 0 Q96EB6;B0QZ35;E9PC49 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 T(0.841)S(0.159)VAGTVR 59.013000000000005 0.014209999999999999 25771000.0 4211.4 4511.1 4302.8 4462.4 6031.5 4493.1 4860.9 5786.0 7126.9 6731.9 6856.9 True False 4922.181361155485 4740.695721534021 4913.001740718701 5555.68820032475 5144.274339879736 4968.556859721606 5744.062609491254 6606.183218881851 5512.668529320676 5211.159114492395 5154.142489187332 0.9549952046303593 0.9197835976555432 0.9532141866518997 1.0779073748891896 0.9980853945485019 0.9639929183457658 1.1144555319418297 1.2817230475759442 1.069560754458279 1.0110622912394596 1.0 12.331516706532183 -6.188060890247997 5.41775138528973 1.0520885054502709 0.9380345867319704 0.29848234073032676 0.081690976409561 0.2507953227234353 13.478389580755405 0.012318271423092822 0.03328249559247747 6.485434981471231e-07 6.188060890247997 -0.1140539187183005 T(ph)SVHVPLEAR ddPTM_A549_MK2206_60min_R1 1 TSVHVPLEAR 10 0 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 T(0.5)S(0.5)VHVPLEAR 66.538 0.0044729999999999995 12611000.0 247.29 233.11 120.28 169.08 228.77 246.02 198.28 282.0 252.39 192.04 254.42 True False 289.02650633996757 244.97430330668683 137.3375126368052 210.50460759028968 195.11823604978656 272.0536731051412 234.30490942210812 321.97436358878 195.22406798401056 148.6580306224275 191.24049236521475 1.511324839030478 1.2809750711102326 0.7181403422374052 1.1007324075922476 1.020276791994273 1.422573586485002 1.2251846171502876 1.6836097816245992 1.020830189096085 0.777335535920568 1.0 7.579244214921115 -8.949895395971444 24.999992242974113 1.0091872596144988 1.2300241846138753 0.21669181715201802 0.2524677600650001 154.76272791531986 77219.88594195223 0.04280557028434808 0.04556373720008193 1.1222887358529102e-09 8.949895395971444 0.22083692499937646 T(ph)SVHVPLEAR ddPTM_A549_PD325901_60min_R1 2 TSVHVPLEAR 10 0 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 T(0.5)S(0.5)VHVPLEAR;T(0.5)S(0.5)VHVPLEAR 85.67200000000001 0.0007277999999999999 22964000.0 911.9200000000001 997.9300000000001 1094.8000000000002 929.1899999999999 857.8499999999999 1016.74 973.0899999999999 1007.02 1490.28 1283.02 1343.74 True False 1004.4974470799775 1082.029063335639 1169.0997115672149 986.5839559563979 797.5975754218392 1008.4600065390731 1010.1214724452793 986.9341961080933 1427.6487141883013 1202.0098982384372 1178.468498669682 0.8523753059279121 0.9181654533465179 0.992050031788679 0.8371746525852038 0.6768085666457863 0.8557377712492752 0.8571476230256118 0.8374718520029998 1.2114441037668016 1.0199762654626152 1.0 10.202697479465323 -8.747260050213018 24.999838925129964 1.0998486034529724 0.8539292269664451 0.5619835526500234 0.08735815426417111 130.17091831367532 229506.6534389435 0.017709603376970577 0.020033420551127043 1.7895339821395989e-09 8.747260050213018 -0.24591937648652729 T(ph)SVQTEDDQLIAGQSAR ddPTM_A549_MK2206_60min_R1 1 TSVQTEDDQLIAGQSAR 17 0 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 T(0.785)S(0.215)VQTEDDQLIAGQSAR 140.89 3.9988e-16 4969400.0 660.71 628.79 565.87 528.79 1197.5 812.48 791.12 940.25 1353.9 1057.4 1313.9 True False 772.2216951913949 660.7927252207608 646.1188749234202 658.343573738285 1021.3493363186584 898.4560943194247 934.8562635768521 1073.533316894859 1047.2438117340307 818.5326056038066 987.6223682047626 0.7818997625530603 0.6690742803060525 0.6542165261990717 0.6665944342015869 1.0341496600317008 0.9097162268130695 0.9465725905703966 1.0869876497899291 1.0603686646320538 0.828791076382447 1.0 9.947815701561861 -6.76209585283462 24.99652265599753 1.0185036826468234 0.6884746592088914 0.739709293769057 0.08021935509634703 4.298652139766807 163690.6648838867 0.008677179466313622 0.017124906029689618 1.729434614772114e-07 6.76209585283462 -0.33002902343793206 T(ph)T(ph)SVISHTYEEIETESKVPDNTTSK ddPTM_A549_PD325901_60min_R1 1 TTSVISHTYEEIETESKVPDNTTSK 25 1 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 2 T(0.336)T(0.336)S(0.336)VIS(0.33)HT(0.33)Y(0.327)EEIET(0.002)ES(0.002)KVPDNTTSK 41.423 0.038966 2224700.0 1118.4 1414.8 1873.9 1584.6 1833.0 1166.1 1843.8 2041.5 1712.6 1925.6 1490.6 True False 1231.9391446774355 1534.030161241032 2001.0741226761065 1682.4771431122897 1704.2564035067112 1156.6036682192234 1913.966817966074 2000.780680974231 1640.6253777269267 1804.0172873750482 1307.265649691925 0.9423785784991434 1.173464751867799 1.5307325815129365 1.2870200815792783 1.3036802457926913 0.8847502942434025 1.464099372929386 1.5305081116800874 1.255005345021926 1.3799928788767528 1.0 10.352336625910363 -10.37524097379575 0.9716114634017842 1.0147852263849664 1.268801904708234 0.0 0.22789564684520477 0.6468816582513581 1.1801031793702288 0.0980578600385323 0.03728220071523013 4.2146258468319564e-11 10.37524097379575 0.2540166783232676 T(ph)TEGKQIR ddPTM_A549_PD325901_60min_R1 1 TTEGKQIR 8 1 A0A087WY08;Q9UPZ6 A0A087WY08 THSD7A Thrombospondin type-1 domain-containing protein 7A 1 T(0.5)T(0.5)EGKQIR 46.606 0.015559 3768000.0 1866.9 1558.6 1461.9 1427.0 1857.0 1438.5 1443.9 1507.5 1683.4 1576.4 1817.2 True False 2056.426313660858 1689.948691907176 1561.113325118843 1515.142549047859 1726.5707263022166 1426.785332933155 1498.8484046323965 1477.4317298891285 1612.6525521811911 1476.8658349698933 1593.6959201799052 1.2903504913463775 1.0603959453672978 0.9795553250475887 0.9507099377381987 1.0833752564964285 0.8952682345902545 0.9404858139206369 0.9270474443596165 1.0118947609523565 0.9266923609888996 1.0 10.638160671645656 -5.272727893500199 2.4786279670951052 0.9890808963791305 1.3532134745239859 0.7542362363586007 0.0523592741055544 0.1824858424504278 1.401297115157308 0.006814634618120062 0.13847668794968446 5.3366916030273475e-06 5.272727893500199 0.36413257814485533 T(ph)TESGSDSESKPDQEAEPQEAAGAQGR ddPTM_A549_PD325901_60min_R1 1 TTESGSDSESKPDQEAEPQEAAGAQGR 27 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55;J3QRQ6;J3KS70 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 T(0.271)T(0.271)ES(0.214)GS(0.241)DS(0.004)ESKPDQEAEPQEAAGAQGR 84.06700000000001 6.806699999999999e-07 8392200.0 1176.8 811.45 785.14 905.15 745.35 805.08 873.04 1143.5 1014.3 1172.5 1049.1 True False 1296.2678696856276 879.8337392840223 838.4243218303637 961.0590597551995 692.999187317909 798.5236954034233 906.2640149458188 1120.6919954416032 971.6724983232642 1098.4681498998984 920.0673507928341 1.4088836741882174 0.9562710148619642 0.9112640733397207 1.0445529437894328 0.7532048460590874 0.8678970020133037 0.9849974723751247 1.2180543027376074 1.0560884455751651 1.1938997171819368 1.0 9.845595663007785 -5.257627467724139 24.44607140039776 0.9999732415014151 1.4088838918682585 0.46132697436373127 0.12743816842031733 176.0159338070154 1128736.6458708213 0.016123990663801227 0.16659169280419683 5.5255120744459665e-06 5.257627467724139 0.4089106503668434 T(ph)TGELEQEDDSCHRVK ddPTM_A549_PD325901_60min_R1 1 TTGELEQEDDSCHRVK 16 1 Q4KMZ1;Q4KMZ1-3 Q4KMZ1 IQCC IQ domain-containing protein C 1 T(0.488)T(0.488)GELEQEDDS(0.025)CHRVK 44.089 0.022818 96467000.0 19627.0 17857.0 22811.0 28173.0 33806.0 29638.0 27300.0 26108.0 28385.0 22138.0 21554.0 True False 21619.518591366264 19361.872059146954 24359.091633686272 29913.182224474665 31431.5831843687 29396.637954447593 28338.916439133223 25587.255458670217 27192.077161496425 20740.20290190527 18902.994642063437 1.1437086557310845 1.0242753820636659 1.288636646993582 1.5824573191123417 1.6627832668600733 1.555131264177234 1.4991760287585718 1.3536085653715835 1.4385063148136277 1.0971913865834586 1.0 14.206327186113118 -10.671961944282396 0.8442842704465494 0.9893158663006482 1.4019267172421142 0.3424128695883063 0.18281664736191894 0.5975926505171112 0.7269636647842597 0.1580731301329639 0.037811070335514056 2.128325535589136e-11 10.671961944282396 0.412610850941466 T(ph)TKTPEDGDYSYEIIEK ddPTM_A549_MK2206_60min_R1 2 TTKTPEDGDYSYEIIEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.349)T(0.349)KT(0.301)PEDGDYSYEIIEK;T(0.399)T(0.399)KT(0.2)PEDGDYS(0.002)YEIIEK 142.45 1.3164e-16 19768800.0 5469.1 5949.0 6026.1 5179.9 8588.0 6591.9 6308.200000000001 6474.8 10168.0 8874.5 9663.2 True False 6392.150373342703 6251.778689766552 6880.691593786599 6448.975732534547 7324.716576454807 7289.450482650919 7454.318285336604 7392.622728243375 7864.964234959466 6869.74428639207 7263.560749247477 0.8800298633153092 0.8607043990668422 0.947289054407572 0.8878532107276279 1.008419538201517 1.0035643308147624 1.0262622620880386 1.0177684173715031 1.0827973367985249 0.9457819000279982 1.0 12.826461245544898 -6.776411733330157 1.0006895831884726 1.0380758110412183 0.8764991437515312 0.6279589550372402 0.0409397027748942 0.19787530711143828 0.3775960656180724 0.00585158584167887 0.01916282894260039 1.6733556971926055e-07 6.776411733330157 -0.16157666728968711 T(ph)TNNEKSPIIKPLIPK ddPTM_A549_MK2206_60min_R1 2 TTNNEKSPIIKPLIPK 16 2 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 T(0.377)T(0.377)NNEKS(0.246)PIIKPLIPK;T(0.35)T(0.35)NNEKS(0.3)PIIKPLIPK 69.125 0.0006123999999999999 32760000.0 3496.5 3619.6 4524.5 3496.2000000000003 5162.7 4310.0 3405.9 3820.7 5403.1 4847.0 5096.200000000001 True False 4086.623718782391 3803.822179438395 5166.142134396617 4352.769156950384 4403.273668987335 4766.081339253547 4024.70794331631 4362.2959254030175 4179.306476977724 3752.0593336122997 3830.6728920352484 1.0668161531827258 0.992990601559146 1.3486252363489668 1.1362936172390705 1.1494778575697866 1.2441890690179274 1.050652994069136 1.1387805872104408 1.091011055960261 0.9794778722593614 1.0 11.903382121390488 -9.562159184286514 0.5806636083787454 1.0050718895227442 1.1501305018953671 0.2849322693326576 0.09071425969628334 0.7351102269187055 0.5454402201389207 0.044335071785646864 0.02348356055060833 2.740569472177886e-10 9.562159184286514 0.14505861237262296 T(ph)TNSSHANGAAQAPR ddPTM_A549_MK2206_60min_R1 1 TTNSSHANGAAQAPR 15 0 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 T(0.352)T(0.352)NS(0.227)S(0.069)HANGAAQAPR 73.168 0.00076036 3757100.0 164.29 321.42 238.98 232.56 240.32 165.75 0.0 148.95 277.05 336.52 533.9 True False 192.01813549514048 337.7789051041795 272.8709575153285 289.5372104400152 204.96924634997896 183.2895549840546 0.0 170.06411864024392 214.29861735793858 260.4998982767096 401.3178951096144 0.4784689091491756 0.8416741670887112 0.6799371790804334 0.7214659848670145 0.5107403603170859 0.45671911773082435 0.0 0.42376410499659695 0.5339871956106166 0.6491110948480322 1.0 8.648601678337894 -10.43078954722015 0.9075366810965401 0.9833425828845067 0.521400561013147 0.1639397655208047 0.22603910300452254 0.44691298806063695 0.6944218334054675 0.12393730100043002 0.04205159173075357 3.708603917901087e-11 10.43078954722015 -0.4619420218713597 T(ph)TPASGER ddPTM_A549_PD325901_60min_R1 1 TTPASGER 8 0 P12270 P12270 TPR Nucleoprotein TPR 1 T(0.982)T(0.018)PASGER 68.557 0.0079288 6109000.0 2011.3 1634.3 1266.5 1542.4 1882.3 1283.9 1547.3 1606.2 1734.7 2098.3 2661.4 True False 2215.4856953591975 1772.0281965763495 1352.4523060831903 1637.670544955444 1750.0937415824774 1273.4443440756882 1606.183348215048 1574.1630809604756 1661.7965915817467 1965.812979901883 2334.064672004622 0.9491963620084346 0.7592026981216571 0.5794408022643308 0.701638889700911 0.7498051628875396 0.5455908567357668 0.6881486050836673 0.6744299332582325 0.7119753841929775 0.8422272970755071 1.0 11.188628820295069 -10.474228440109846 0.7445436427730134 1.0062635836462515 0.6982391654636437 0.3352824217300049 0.10848336780868698 0.4165411066709709 0.40547272818851854 0.07341075632769752 0.019756313852122176 3.355610617582477e-11 10.474228440109846 -0.30802441818260773 T(ph)TPDKAPK ddPTM_A549_MK2206_60min_R1 1 TTPDKAPK 8 1 A0A087X085;A0A0C4DFT8;G3XAA4;Q9NQC1-2;Q9NQC1 A0A087X085 JADE2 Protein Jade-2 1 T(0.915)T(0.085)PDKAPK 60.59 0.0044479 20688000.0 8801.1 7835.0 7494.5 4708.9 7316.4 6132.9 6114.8 6891.6 8035.3 10957.0 10272.0 True False 10286.510513763966 8233.768034009225 8557.332793951915 5862.580711390551 6240.167251976475 6781.879407310457 7225.780008746754 7868.50540463984 6215.317379737393 8481.806090033013 7721.178907222253 1.3322461035247024 1.0663874173809786 1.1082935516424233 0.7592856974090832 0.8081884032164485 0.878347657631247 0.9358389561454001 1.019080829389898 0.8049699993253228 1.0985117935940174 1.0 12.914605426683048 -5.46843061629352 1.3651270559538162 0.9014134744895443 1.3970252705738457 0.5459976354954763 0.10846331718645627 0.4527877780587285 0.9642134839974791 0.014775839045160243 0.2763863349073073 3.400708318225684e-06 5.46843061629352 0.4956117960843014 T(ph)TPDKAPK ddPTM_A549_PD325901_60min_R1 1 TTPDKAPK 8 1 A0A087X085;A0A0C4DFT8;G3XAA4;Q9NQC1-2;Q9NQC1 A0A087X085 JADE2 Protein Jade-2 1 T(0.901)T(0.099)PDKAPK 70.1 0.0026753 54545000.0 10295.0 10159.0 8898.3 8520.3 9565.9 7448.8 7230.0 8275.1 8880.9 10576.0 11501.0 True False 11340.14082122156 11015.134583013602 9502.192147824757 9046.579579994732 8894.024184563468 7388.139442441773 7505.141606407809 8110.04663880963 8507.66665716166 9908.229555088554 10086.449910845857 1.124294565625872 1.0920725012642098 0.9420749849366868 0.8969042289365892 0.8817794430327577 0.7324816469367862 0.7440815819982021 0.8040536274402136 0.8434748333021962 0.9823307152335466 1.0 13.300130863483954 -5.807650459912583 2.245740390027733 0.8842839853266629 1.127688327967453 0.561923144407452 0.0820370584630205 0.23467753350757498 2.265047444550294 0.01436085159612687 0.07279923287433218 1.557218448094766e-06 5.807650459912583 0.24340434264079014 T(ph)TPDQELVPASEPVWERPWSVEEIRR ddPTM_A549_MK2206_60min_R1 2 TTPDQELVPASEPVWERPWSVEEIRR 26 2 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65 J3KP36 FAM21C WASH complex subunit FAM21C 1 T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIRR;T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIRR 181.31 1.6897e-57 45276000.0 1789.46 1398.96 884.8599999999999 805.87 1608.94 1440.66 747.74 1084.5 1735.04 2021.6100000000001 2492.8 True False 2091.4770999034286 1470.1610885587172 1010.3464535401015 1003.3081861768792 1372.2670573499304 1593.1096849672892 883.5946790966673 1238.2311961419564 1342.0562102895426 1564.926896930877 1873.768962219981 1.1161872899343546 0.7846010464475395 0.5392054591101112 0.535449250364459 0.7323565951930983 0.8502167113921154 0.4715600999441323 0.6608238374676353 0.7162335577912006 0.8351760160851434 1.0 10.871727362735053 -10.424003111977157 0.8124817061847195 0.997000287558315 0.7007775198115117 0.1482629767477851 0.17432756764933166 0.6180290598436982 0.749431155488763 0.10622745223047685 0.032824175515095755 3.7670109968777166e-11 10.424003111977157 -0.29622276774680334 T(ph)TPDQELVPASEPVWERPWSVEEIRR ddPTM_A549_PD325901_60min_R1 2 TTPDQELVPASEPVWERPWSVEEIRR 26 2 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65 J3KP36 FAM21C WASH complex subunit FAM21C 1 T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIRR;T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIRR 82.62 8.5664e-07 51898000.0 2029.9299999999998 1877.21 1528.31 1883.36 1766.44 1779.0700000000002 1988.8 1773.2399999999998 2133.66 2312.52 2292.32 True False 2236.0069992445174 2035.4090747690682 1632.0303070746154 1999.6908697790996 1642.371348287175 1764.5818437687792 2064.484872313118 1737.8713371201302 2043.9896902025191 2166.5070925428677 2010.3791722137362 1.1122314785933294 1.012450339170481 0.8118022359321896 0.9946834395310278 0.8169460622090866 0.8777358361834319 1.0269131817754575 0.8644495332721076 1.0167184969150733 1.0776609320704464 1.0 10.973251914564917 -8.809711707059973 24.998782271554983 1.0078948973145416 0.9364054180532496 0.15357563491198523 0.09130836078969953 178.3068967842209 92338.95142537891 0.014948936267249607 0.015914368483652956 1.5498450941750442e-09 8.809711707059973 -0.07148947926129201 T(ph)TPLKPSPLPVIPDTIK ddPTM_A549_MK2206_60min_R1 2 TTPLKPSPLPVIPDTIK 17 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 T(0.5)T(0.5)PLKPSPLPVIPDTIK;T(0.5)T(0.5)PLKPSPLPVIPDTIK 122.19 2.6036e-10 8362000.0 5398.8 6272.0 5888.3 5421.200000000001 8591.2 7224.3 6742.0 6755.4 8689.8 7931.5 8866.400000000001 True False 6309.985452012688 6591.218010121999 6723.349481703525 6749.3942433669135 7327.445860693825 7988.770630897774 7966.934130138453 7712.998637544834 6721.574174759121 6139.768641334013 6664.6281798087475 0.9467873198282104 0.9889851064896384 1.008810889416559 1.0127187985992938 1.099453062196802 1.1986821192967174 1.195405642324532 1.1573036678793642 1.0085445119238456 0.9212469886820008 1.0 12.702308674138482 -5.902022011878182 1.575249431917648 1.0500600298312885 0.9566191034480389 0.16801350057284548 0.08496851385671395 0.838081300902201 3.6555706570211117 0.013819125824537627 0.08266841657757079 1.2530776620647578e-06 5.902022011878182 -0.09344092638324963 T(ph)TPNSGDVQVTEDAVRR ddPTM_A549_MK2206_60min_R1 1 TTPNSGDVQVTEDAVRR 17 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.465)T(0.465)PNS(0.069)GDVQVTEDAVRR 51.695 0.010596 1543500.0 313.2 355.05 237.63 200.24 453.64 193.2 187.14 242.05 283.78 458.05 423.33 True False 366.0605029951791 373.1205284588356 271.3295072155307 249.29880898911523 386.9101569332741 213.6442957642192 221.14091562060372 276.36132874703634 219.50428310354027 354.57618687045897 318.20547768637044 1.1503903253229837 1.1725773269892938 0.8526864753816664 0.7834522862451445 1.2159129369690498 0.6714035764487726 0.6949626298971652 0.8684995957845311 0.6898193101499277 1.1142994440213132 1.0 8.313814860650922 -5.7632558596417685 23.319230448092636 0.8485288184506936 1.1614840417430736 0.28573960615633787 0.16884379075615613 15.291128906393308 196340.0566083346 0.02238891055801739 0.07533490559329657 1.7248214337226054e-06 5.7632558596417685 0.31295522329238 T(ph)TPTMSEEPPLDLTGK ddPTM_A549_MK2206_60min_R1 2 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.5)T(0.5)PTMSEEPPLDLTGK;T(0.871)T(0.125)PT(0.004)MSEEPPLDLTGK 203.2 1.4762e-39 264007000.0 6255.6 6471.7 5597.2 5777.2 9405.2 7401.1 5484.6 6209.2 9558.6 8408.5 8111.7 True False 7311.39234526387 6801.08188713434 6390.96712446563 7192.614259348359 8021.7075389931 8184.27948954743 6481.080826187685 7089.373114877491 7393.592361947633 6509.014010043125 6097.34101846912 1.1991116001413296 1.115417665919219 1.0481564185285197 1.1796312913385698 1.315607494265941 1.3422702559618822 1.0629355987398768 1.1626991328520844 1.2125928891876163 1.0675168061499314 1.0 12.573964521470943 -10.796830532809134 0.8401192123213771 0.9892633241025504 1.1829163129942237 0.2857282126330474 0.08824689537650095 0.6490526506967279 0.7372173396132059 0.08388691536323882 0.01685859827236827 1.5965020009466415e-11 10.796830532809134 0.19365298889167337 T(ph)TPTMSEEPPLDLTGK ddPTM_A549_PD325901_60min_R1 2 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.624)T(0.372)PT(0.004)MSEEPPLDLTGK;T(0.499)T(0.499)PT(0.002)MSEEPPLDLTGK 200.63 1.0277999999999998e-39 275648000.0 16283.4 16420.1 16889.3 14975.0 20400.0 16362.3 17353.0 17056.3 17723.2 20848.1 19459.8 True False 17936.478780794496 17803.879453345962 18035.509461611397 15899.971739307432 18967.17437617943 16229.050853703278 18013.377910925963 16716.098716091496 16978.355538088217 19531.747408041003 17066.36796583585 1.0509839478851313 1.0432143200584034 1.0567866283977712 0.931655274932349 1.1113773249322114 0.9509375917706248 1.0554898351533188 0.9794760519376158 0.9948429315526409 1.1444583550020984 1.0 14.058868438781392 -3.7756362389035982 0.3123752995525778 0.9962014792849639 1.1955150041657108 0.0 0.0649349372272104 23.051076505788718 0.7665446472371329 0.013497079631932548 2.118664755544293 0.0001676346380599805 3.7756362389035982 0.19931352488074683 T(ph)TPTQPSEQK ddPTM_A549_PD325901_60min_R1 1 TTPTQPSEQK 10 0 O95104-2;O95104-3;O95104 O95104-2 SCAF4 Splicing factor, arginine/serine-rich 15 1 T(0.893)T(0.107)PTQPSEQK 244.71 6.512199999999999e-46 51340000.0 8405.6 7933.1 7148.3 7710.6 8888.0 7554.3 8467.4 7229.8 7655.9 7943.4 8420.1 True False 9258.930324124327 8601.650178216876 7633.42662421987 8186.866249956851 8263.737541935428 7492.780285420184 8789.631540539063 7085.595967331617 7334.149147109408 7441.852368370872 7384.481079411632 1.2538362851167388 1.1648279798832153 1.0337119889848878 1.1086583013642375 1.1190681448118562 1.0146657842093327 1.1902842523417216 0.9595252382847423 0.9931840935387386 1.0077691700123919 1.0 12.850280828473666 -2.0000000001704277 0.23706067895874222 0.9866037569933358 2.3877068347913304 0.5352242335735063 0.062312514727388635 23.759164032942373 0.28376919436595816 0.03184327664164001 13.246319380776175 0.009999999996075757 2.0000000001704277 1.4011030777979947 T(ph)TPVDLCLLEESVGSLEGSR ddPTM_A549_PD325901_60min_R1 2 TTPVDLCLLEESVGSLEGSR 20 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 T(0.653)T(0.347)PVDLCLLEESVGSLEGSR;T(0.976)T(0.024)PVDLCLLEESVGSLEGSR 273.52 7.369699999999999e-112 45152000.0 33523.0 33965.0 40200.0 35268.0 33405.0 34724.0 33251.0 35870.0 25838.0 34446.0 38000.0 True False 36926.23028167175 36827.34975017785 42928.21374223786 37446.42426056055 31058.74804099383 34441.219256705495 34516.38500064537 35154.54471052936 24752.11871406536 32271.073681408867 33326.240901847 1.108022665695405 1.1050556184432074 1.2881204894566642 1.1236318062648705 0.931960737260124 1.0334564692772386 1.0357119214946446 1.0548607871516955 0.7427215924822038 0.968338246622359 1.0 15.024370974581947 -7.395721690937262 0.7640177667057099 0.8894284985848888 1.161602547218674 0.37804320948551806 0.10207339718661805 0.4629060892960236 0.5338310102150516 0.023945084239760533 0.05725239082048959 4.020483730924646e-08 7.395721690937262 0.27217404863378514 T(ph)TRTPEEGGYSYDISEK ddPTM_A549_PD325901_60min_R1 1 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.359)T(0.359)RT(0.282)PEEGGYSYDISEK 60.56399999999999 0.01385 45427000.0 1228.2 1138.6 1555.8 1836.4 1703.8 1815.5 1117.4 1628.1 1796.1 1094.0 2340.8 True False 1352.8859598469483 1234.553817917047 1661.385943785414 1949.8302572329978 1584.1309657909064 1800.7151699271067 1159.9232684647416 1595.6262682802578 1720.6161631059983 1024.9246532967925 2052.896439553777 0.6590132525832697 0.6013716981190697 0.8092887258095383 0.9497947483687088 0.7716565411040595 0.8771583092221228 0.5650179162066575 0.7772560941394041 0.8381407507725992 0.4992578454272018 1.0 11.0034451357274 -14.999999991521996 0.12752594561006217 1.847045148072023 0.6583305709836222 0.0 0.18724107886800148 54.87422485972566 0.4809932035874235 11.6851056323023 0.3584838317808119 1.000000019521326e-15 14.999999991521996 -1.1887145770884007 T(ph)TSEDNEVFGEADANQNNGTSSQDTAVTDSK ddPTM_A549_MK2206_60min_R1 1 TTSEDNEVFGEADANQNNGTSSQDTAVTDSK 31 0 J3KS94;J3QQK6;P02686-2;P02686 J3KS94 MBP Myelin basic protein 1 T(0.305)T(0.305)S(0.305)EDNEVFGEADANQNNGT(0.06)S(0.011)S(0.011)QDT(0.002)AVTDSK 42.121 0.050056 1290100.0 164.83 429.49 270.89 290.37 447.19 432.14 331.45 173.53 365.57 529.16 481.24 True False 192.649274293408 451.3492064998881 309.3062753424022 361.51066303520474 381.4089433890108 477.86876796868415 391.6701746417074 198.12840891333684 282.7689786953317 409.6223884824189 361.73482645167815 0.5325704361483226 1.247735007788035 0.8550635789659596 0.99938031010541 1.0543882299924494 1.3210471677725495 1.0827549519731634 0.5477172625506203 0.7817023908620119 1.1323830566729736 1.0 8.498788691640135 T(ph)TSFAESCKPVQQPSAFGSMK ddPTM_A549_MK2206_60min_R1 1 TTSFAESCKPVQQPSAFGSMK 21 1 A0A3B3ITW1;P49841;P49841-2 A0A3B3ITW1 GSK3B Glycogen synthase kinase-3 beta 1 T(0.345)T(0.345)S(0.307)FAES(0.003)CKPVQQPSAFGSMK 114.41 6.381100000000001e-15 7834300.0 2001.3 2397.7 2319.5 2000.0 3946.5 3599.3 2572.1 2661.5 4858.6 4274.2 4413.1 True False 2339.0705129126823 2519.732688595269 2648.439978060107 2490.0000897834116 3365.975077896939 3980.1755369780276 3039.4172761983286 3038.775775501906 3758.1348575898965 3308.6552514391774 3317.205474636152 0.7051328387094392 0.7595949988210019 0.7983949135229863 0.7506318522691234 1.0147020145823606 1.1998580031930624 0.9162583685087242 0.9160649826297584 1.132921938759946 0.9974224619902654 1.0 11.695752663100185 -6.790482324424201 5.289739722136407 1.0502868185310887 0.7558759948206911 0.7100566756858538 0.0827779511407983 0.0746662722399463 5.433588834844005 0.012760554190236703 0.025124836571129926 1.620009926184003e-07 6.790482324424201 -0.2944108237103976 T(ph)TSFAESCKPVQQPSAFGSMK ddPTM_A549_PD325901_60min_R1 1 TTSFAESCKPVQQPSAFGSMK 21 1 A0A3B3ITW1;P49841;P49841-2 A0A3B3ITW1 GSK3B Glycogen synthase kinase-3 beta 1 T(0.306)T(0.306)S(0.306)FAES(0.081)CKPVQQPSAFGSMK 132.35 5.8664999999999996e-18 19997000.0 4102.0 4156.4 5482.8 4561.2 4286.6 4927.4 4373.9 5370.9 4535.2 4086.0 4483.5 True False 4518.432020267204 4506.674414887068 5854.895778754771 4842.934964763208 3985.524003967194 4887.272888074262 4540.351157989916 5263.773186110462 4344.601315582831 3828.0092626788796 3932.057923248184 1.1491265155459942 1.1461363242493148 1.4890156485584458 1.2316540242526663 1.0135974804447547 1.2429300339596716 1.1547009852385985 1.3386814967776919 1.104917933658987 0.973538370339328 1.0 11.941068858875525 -9.162792261787917 1.9489265229258783 1.03511456452677 1.2187383570524317 0.3461620672134732 0.11861908217193969 0.26251748259743035 2.059172010969215 0.024148197832311577 0.022638063367792564 6.873971674495525e-10 9.162792261787917 0.18362379252566163 T(ph)TSFKGTSPSSK ddPTM_A549_MK2206_60min_R1 1 TTSFKGTSPSSK 12 1 F8W8I7;F5H6V0;F5H497;F5GWA4;Q9H3F6-2;Q9H3F6 F8W8I7 KCTD10 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 1 T(0.339)T(0.339)S(0.309)FKGT(0.011)S(0.002)PS(0.001)SK 44.196000000000005 0.025044999999999998 26788000.0 3100.2 3221.0 3186.9 3431.7 3983.8 3198.8 3063.3 3337.4 4253.9 4655.8 4375.0 True False 3623.437967387147 3384.9351419966456 3638.850341056157 4272.466654054867 3397.7882973079477 3537.2948928084083 3619.8619580025406 3810.486670358843 3290.3984420824227 3604.05154640647 3288.566756142658 1.1018289230768963 1.0293040686110393 1.1065155768114514 1.2991880569474221 1.0332125054056684 1.0756342063609186 1.1007415164192917 1.158707410528097 1.0005569860901693 1.0959338257842945 1.0 11.6832432411678 -8.77723202198863 24.665592884583432 1.0002630006340545 1.1119997533019603 0.1556298858912306 0.07446955666737676 161.23325992017178 251819.6428242309 0.011818530837935673 0.012602510195276272 1.6701980719696926e-09 8.77723202198863 0.11173675266790584 T(ph)TSLELVPEEPSEPVPPLIVDRER ddPTM_A549_PD325901_60min_R1 2 TTSLELVPEEPSEPVPPLIVDRER 24 1 Q9ULI0-2;Q9ULI0;H7BYF1 Q9ULI0-2 ATAD2B ATPase family AAA domain-containing protein 2B 1 T(0.348)T(0.348)S(0.304)LELVPEEPSEPVPPLIVDRER;T(0.344)T(0.344)S(0.312)LELVPEEPSEPVPPLIVDRER 85.537 1.4962e-06 3397300.0 1485.8200000000002 1245.04 1644.79 1411.08 1509.54 1398.58 1357.92 1284.28 1528.3000000000002 1982.7 1273.48 True False 1636.6593525971284 1349.9638902682598 1756.415340325755 1498.2392068048023 1403.5151180302896 1387.1904281777215 1409.5963886823363 1258.6640279018307 1464.070865806413 1857.5119836303013 1116.8500332548458 1.4654244561621204 1.208724403520899 1.572651016723363 1.3414864683653818 1.2566728533284037 1.242056128283419 1.2621178732245162 1.1269767564349666 1.3108929777614444 1.663170460063414 1.0 10.125219763406621 -14.86957762695416 0.12855243944246791 1.7484132384059656e-13 1.4545608844911737 0.0 0.21912436025703555 37.73010207741409 0.3435083518451647 9.870984000596902 0.3180516292066454 1.3502754544472826e-15 14.86957762695416 1.454560884490999 T(ph)TSPEEVHAQPYIAIDWEPEMK ddPTM_A549_MK2206_60min_R1 1 TTSPEEVHAQPYIAIDWEPEMK 22 0 G5E9A6;P51784 G5E9A6 USP11 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 11 1 T(0.333)T(0.333)S(0.333)PEEVHAQPY(0.001)IAIDWEPEMK 62.236999999999995 0.0011818 1321700.0 380.01 301.66 407.68 597.26 481.8 512.16 211.16 321.68 787.97 847.43 725.34 True False 444.1463976475034 317.01320550596347 465.4951542382167 743.58872681202 410.9278582366007 566.3564312557066 249.5250387006876 367.2791251036833 609.496053129525 655.9949744343044 545.2180596344036 0.814621580850286 0.581442965624684 0.8537779444619916 1.3638373008235163 0.7536945098849965 1.0387704905363504 0.45766099323270176 0.673637123007192 1.1178941019272601 1.203179100256111 1.0 9.090689540093706 -8.774907656193394 24.970192134734415 1.0556722269824987 0.822050422478908 0.22965387749619082 0.23113601203625547 293.0315201812764 543278.7559332853 0.04018689638533004 0.042899116973227416 1.6791610192885416e-09 8.774907656193394 -0.2336218045035907 T(ph)TSPEEVHAQPYIAIDWEPEMK ddPTM_A549_PD325901_60min_R1 1 TTSPEEVHAQPYIAIDWEPEMK 22 0 G5E9A6;P51784 G5E9A6 USP11 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 11 1 T(0.333)T(0.333)S(0.333)PEEVHAQPYIAIDWEPEMK 74.206 1.9232e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)TSPEPR ddPTM_A549_PD325901_60min_R1 1 TTSPEPR 7 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 T(0.468)T(0.223)S(0.309)PEPR 57.177 0.037946 3811900.0 2135.5 1935.5 1937.9 1887.0 2372.3 2501.7 1739.8 1875.4 1524.4 2213.6 2539.5 True False 2352.29438792799 2098.611377637841 2069.417547539371 2003.555704312062 2205.677831990709 2481.3269846359904 1806.00904105509 1837.9936757771611 1460.3347692437972 2073.8329182246594 2227.1575992168546 1.0561867686216448 0.9422823864713414 0.9291742749893629 0.8996021229106469 0.990355524353688 1.114122765945486 0.8109031178081627 0.8252643083827849 0.6556944015804276 0.9311567887938826 1.0 11.120987935093073 -7.796727419413047 24.998770848489112 0.8303696369280431 0.9798449082253798 0.3457736344599629 0.09734449981444507 202.89072539422781 143731.21298821963 0.020850887030933987 0.028810234930506277 1.596881099218249e-08 7.796727419413047 0.14947527129733673 T(ph)TSPGGRPSAR ddPTM_A549_MK2206_60min_R1 1 TTSPGGRPSAR 11 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 T(0.333)T(0.333)S(0.333)PGGRPSAR 48.532 0.011918999999999999 145670000.0 1444.8 1795.0 1763.0 1271.6 2739.1 1898.7 1940.9 1853.6 2715.6 2226.3 2259.5 True False 1688.6469180314018 1886.3578329351067 2013.0199100323207 1583.1420570842922 2336.1820184638295 2099.6191737449444 2293.536406583465 2116.353476411924 2100.5209359221026 1723.3772837674999 1698.4037909724193 0.9942552689808639 1.1106651097705538 1.1852422378778185 0.9321352587053906 1.3755162528966396 1.236230856822811 1.350407022625817 1.2460838156750746 1.2367618036930144 1.0147040962389644 1.0 10.72996378123175 -4.346304056488674 1.0020416122295903 1.158613860554841 0.2472653636056059 0.12612230615219155 0.1353027486606079 19.24715418678811 3.807258592099082 0.022187076011191357 29.272223503130995 4.505011910422842e-05 4.346304056488674 -0.9113484969492351 T(ph)TSPGGRPSAR ddPTM_A549_PD325901_60min_R1 1 TTSPGGRPSAR 11 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 T(0.333)T(0.333)S(0.333)PGGRPSAR 59.79600000000001 0.0034844 201570000.0 2841.8 2763.3 2451.4 2363.9 2958.4 2576.7 2805.7 2682.7 2972.9 2537.5 3130.6 True False 3130.297443977411 2996.1729888021946 2617.7667454657185 2509.912734193578 2750.6121899259433 2555.716209502163 2912.472448837952 2629.1914439625616 2847.959351538235 2377.281816947542 2745.5560465084795 1.1401324143275846 1.091280942019896 0.9534559488576929 0.9141728275354026 1.0018415735580752 0.9308555958099142 1.0607951174559849 0.9576171090392058 1.0372978381410138 0.8658653389978066 1.0 11.422882646752692 -5.5975508146513935 5.153163971345304 1.0000276890139517 1.1293168793389416 0.4111788023099534 0.05987082721845802 0.11049481136754319 5.15714001292909 0.006328570889268232 0.026484009875270973 2.5260921272819914e-06 5.5975508146513935 0.12928919032498998 T(ph)TSPLEEEER ddPTM_A549_MK2206_60min_R1 1 TTSPLEEEER 10 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.476)T(0.476)S(0.049)PLEEEER 55.31399999999999 0.018474 48111000.0 182.38 314.54 200.72 245.48 497.63 247.15 349.35 292.92 283.86 325.52 251.06 True False 213.1612852371035 330.5487424910356 229.1851142040201 305.62261102001605 424.42928620647467 273.30324895510785 412.82237294035457 334.4423070298775 219.56616323127398 251.9848059165414 188.71487309649723 1.1295415233546848 1.7515775893403656 1.2144517834947162 1.6194940335398968 2.249050534503698 1.4482337532312957 2.1875455080282014 1.7722095855097981 1.1634809680263054 1.335267336282985 1.0 7.5600643196393325 -8.83251863008549 4.932161163817834 1.0716253317374234 1.686111746793312 0.2988070359640067 0.337300650585737 0.14304067235699372 6.440031641432364 0.056589751666051416 0.0602138335235172 1.470555331114277e-09 8.83251863008549 0.6144864150558886 T(ph)TSPLEEEEREIK ddPTM_A549_MK2206_60min_R1 1 TTSPLEEEEREIK 13 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.363)T(0.363)S(0.274)PLEEEEREIK 61.375 0.029238 4098700.0 1531.0 2133.4 1887.6 1764.9 2643.4 2538.6 1523.6 1335.1 2988.0 3639.4 3682.0 True False 1789.3953706437408 2241.9809475118445 2155.290063628478 2197.3005792293707 2254.5593616908063 2807.2329670137024 1800.418398202158 1524.354513572269 2311.222770855517 2817.2570123269265 2767.6577819696586 0.6465377989652615 0.8100643663814152 0.7787415328836729 0.7939206189233475 0.8146091530457585 1.0142991612987207 0.6505205990174314 0.5507742046371903 0.8350825690633938 1.017921012735169 1.0 11.434449850910651 -9.858582476615537 1.0677309704023463 0.9743979995677232 0.7700549961137668 0.3829425925510439 0.11658665335594404 0.3772431722266041 0.876218528914522 0.0384607423424052 0.02312875088358951 1.384897155926118e-10 9.858582476615537 -0.2043430034539564 T(ph)TSPPEVSGYSYEK ddPTM_A549_PD325901_60min_R1 2 TTSPPEVSGYSYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.684)T(0.05)S(0.266)PPEVSGYSYEK;T(0.333)T(0.333)S(0.333)PPEVS(0.001)GYSYEK 267.93 1.2821999999999999e-83 474990000.0 28875.0 27087.0 28372.0 29613.0 34372.0 32945.0 30816.0 30350.0 32520.0 33171.0 36758.0 True False 31806.3687433485 29369.71655183475 30297.494534695816 31442.12775399738 31957.8292969627 32676.706842879947 31988.719743162223 29744.645440885593 31153.29749134629 31076.57739900174 32236.99902816032 0.9866417378231873 0.9110561602269218 0.9398360718449547 0.9753428886644012 0.9913400831462708 1.013639849488953 0.9922983127312435 0.9226865507829201 0.966383299640659 0.9640034226466023 1.0 14.976429827860036 -5.600456423607398 0.005149989529946474 1.9143587599838439 5.386294574408641e-06 0.015328816851450267 0.030992278889655108 24321.773666604313 20.353778497696233 3649.4976119905054 3920.0100282430767 2.509247940637689e-06 5.600456423607398 -1.9143533736892695 T(ph)TSPPLSIPTTHLIHQPAGSR ddPTM_A549_PD325901_60min_R1 1 TTSPPLSIPTTHLIHQPAGSR 21 0 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;A0A1B0GV73;Q5T5U3-3 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.304)T(0.304)S(0.304)PPLS(0.072)IPT(0.014)T(0.003)HLIHQPAGSR 47.391999999999996 0.013805000000000001 2388700.0 2034.1 2138.4 1545.1 1762.2 2413.6 2184.7 2081.1 1982.4 2630.6 2333.9 2240.4 True False 2240.6003345747245 2318.6104727154516 1649.959777441087 1871.0470917534258 2244.0770624679726 2166.9085275349753 2160.297399321616 1942.8594768372845 2520.045030157918 2186.5371556941336 1964.8450030657386 1.1403445722582322 1.1800475198286553 0.8397404247493631 0.9522619284646064 1.142114039003865 1.1028394220174913 1.099474714774404 0.9888105544233005 1.2825668315953185 1.1128293337553292 1.0 10.940199794536271 -6.782676533722307 24.963410887070424 1.1207123882344932 1.0254979224683214 0.08541253436517038 0.11135602193475577 429.67496595461347 505064.51189053885 0.019532690627106247 0.03693834867870825 1.649390414361112e-07 6.782676533722307 -0.09521446576617176 T(ph)TSREEVDEAASTLTR ddPTM_A549_PD325901_60min_R1 1 TTSREEVDEAASTLTR 16 1 D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5 D6RAU6 FBXO4 F-box only protein 4 1 T(0.333)T(0.333)S(0.333)REEVDEAASTLTR 58.997 0.0023537 3344000.0 336.45 289.32 363.5 338.43 451.65 473.08 331.19 462.5 170.32 244.25 433.63 True False 370.60615631860077 313.70201176862827 388.1692959030711 359.3340524697038 419.92766210791365 469.227393329174 343.79361668412196 453.27507467576896 163.1620427037546 228.82801331603426 380.2962590070506 0.9745195950290161 0.8248885029468889 1.0207023779738904 0.9448792723018657 1.1042119194239255 1.233846986963063 0.9040152474330496 1.1918999041938128 0.42903930511903776 0.6017098719653506 1.0 8.570979936951165 -8.744651984387989 24.99996363798373 0.7303796258478552 1.02098117167535 0.44269813662836854 0.17098469882776351 244.66051879699833 364350.7865458343 0.03824368032788877 0.04330778934459094 1.8003129920781542e-09 8.744651984387989 0.29060154582749487 T(ph)TSSANNPNLMYQDECDRR ddPTM_A549_MK2206_60min_R1 1 TTSSANNPNLMYQDECDRR 19 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 T(0.381)T(0.118)S(0.381)S(0.118)ANNPNLMY(0.003)QDECDRR 51.431000000000004 0.0045016000000000006 8215600.0 1496.9 1443.0 1341.4 1312.8 2088.0 1865.5 1909.0 1944.2 2738.2 2830.4 2811.8 True False 1749.540124308696 1516.4425364486685 1531.6306904806331 1634.436058933831 1780.8579659568752 2062.9059717813207 2255.840589503754 2219.796303862787 2118.002072006887 2191.0106742018274 2113.5524582678668 0.8277722738627968 0.7174851660372076 0.7246712446095898 0.7733122745736394 0.8425899054411704 0.9760372701948203 1.067321788337583 1.0502679009358449 1.002105277170488 1.036648352696881 1.0 11.045454205094996 -7.126580165255274 2.1968639099470466 1.0105740481258583 0.7545459284857874 0.9245833643119605 0.035401892749596105 0.06143652034727224 0.5805233927148046 0.005464918385036282 0.010452288600250222 7.47170703222501e-08 7.126580165255274 -0.2560281196400709 T(ph)TTPPDSGVLFEGLGISTRPR ddPTM_A549_PD325901_60min_R1 1 TTTPPDSGVLFEGLGISTRPR 21 1 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 T(0.347)T(0.347)T(0.301)PPDS(0.006)GVLFEGLGISTRPR 82.586 4.0727e-05 8026600.0 608.34 672.07 905.54 729.09 826.35 858.82 749.22 766.01 951.78 787.12 627.04 True False 670.0982289637619 728.7076975298703 966.9953898543802 774.1242334164708 768.3100267527391 851.8260546608639 777.7319770889156 750.7313296267796 911.7799965041077 737.4211088692608 549.9180551340568 1.2185419676762717 1.3251205170054454 1.758435426563054 1.4077083416142029 1.3971354815135932 1.5490054321879088 1.4142688530190617 1.3651694513717492 1.6580288426460879 1.3409654438232534 1.0 9.10307284430376 -10.941454743367153 1.1655884775214975 0.9965091259440874 1.473773259615716 0.2012957824586996 0.1747667715951912 0.2829189884354811 0.6748311242601746 0.10975547609112205 0.02492052698896203 1.1443141194294701e-11 10.941454743367153 0.4772641336716287 T(ph)VASDLQK ddPTM_A549_PD325901_60min_R1 1 TVASDLQK 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 T(0.901)VAS(0.099)DLQK 94.40899999999999 0.0026872 8281200.0 6196.1 4631.3 4591.2 4492.9 5854.2 4661.0 4939.6 4614.9 4781.3 5418.2 6030.0 True False 6825.12351067226 5021.5959045487625 4902.786441128419 4770.416228883763 5443.021187893606 4623.042361349626 5127.579181052834 4522.852199180988 4580.358588418634 5076.093927324202 5288.348227319409 1.290596461748477 0.9495584800197888 0.9270922092083135 0.9020616691313882 1.0292478773949043 0.8741940134477458 0.9695993835209173 0.8552485586739736 0.8661227270845504 0.9598637814925445 1.0 12.368601463263722 -5.260966034665282 4.914329367960111 0.9317011855458062 1.3093407643345352 0.7908850483788479 0.052883359117729255 0.06414926818203599 4.6210969521179415 0.008181494866779083 0.08221929107525928 5.483198462827824e-06 5.260966034665282 0.377639578788729 T(ph)VASIKNDPPSR ddPTM_A549_MK2206_60min_R1 1 TVASIKNDPPSR 12 1 O00139-1;O00139-5;O00139;O00139-4;O00139-2;D6R9M0 O00139-1 KIF2A Kinesin-like protein KIF2A 1 T(0.916)VAS(0.084)IKNDPPS(0.001)R 43.316 0.029008 5562300.0 1768.9 1608.0 1305.7 1502.4 2444.6 1419.1 1523.6 1253.1 2398.5 2287.2 2550.4 True False 2067.447074547166 1689.8403316766864 1490.8678936637564 1870.4880674452993 2085.002578342038 1569.268220077658 1800.418398202158 1430.7307624578013 1855.2435796174555 1770.5199314706117 1917.065292540854 1.078443745547653 0.8814724977035047 0.7776823770502772 0.9757038921539173 1.0876012342691792 0.8185783896790337 0.9391534055764508 0.7463130066694437 0.9677519001757834 0.9235574491696039 1.0 10.904683758663856 -8.979659728338639 24.98897128200267 0.9857729947236683 0.9096594615179328 0.034436615494618406 0.105592110622541 237.0969483272306 291288.4731611898 0.01794336061224559 0.018315300874016976 1.0479492994224653e-09 8.979659728338639 -0.07611353320573555 T(ph)VATPLNQVANPNSAIFGGARPR ddPTM_A549_MK2206_60min_R1 1 TVATPLNQVANPNSAIFGGARPR 23 1 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 1 T(0.512)VAT(0.488)PLNQVANPNSAIFGGARPR 44.81100000000001 0.013819999999999999 4168800.0 1091.2 1293.5 1542.6 1233.9 2007.3 1060.5 1094.8 1257.5 2429.6 2086.7 2008.1 True False 1275.3678827213905 1359.3336250147972 1761.3638759023593 1536.2055553918767 1712.028829054232 1172.7214060970737 1293.7109886792607 1435.7544759322375 1879.2994792739498 1615.31302072391 1509.4333492594442 0.8449315654428263 0.9005588923033344 1.1669040416832692 1.0177365937658442 1.1342195598727063 0.7769282470620067 0.8570838780751593 0.951187726597299 1.2450364106477234 1.070145310832315 1.0 10.559791339085143 -8.725622163838198 24.97352291379096 1.1157116643104212 0.9600693459484809 0.2201500085210828 0.12418774485481268 205.7981770058317 143492.49616819047 0.024149470822070182 0.02738242340704863 1.8809525337054243e-09 8.725622163838198 -0.1556423183619403 T(ph)VEITDSTMCPK ddPTM_A549_MK2206_60min_R1 2 TVEITDSTMCPK 12 0 A0A087WYX8;A0A5F9ZHT2;A0A5F9ZH12;A0A1W2PQW0;A0A590UJL7;Q14CM0 A0A087WYX8 FRMPD4 FERM and PDZ domain-containing protein 4 1 T(0.989)VEIT(0.004)DS(0.004)T(0.004)MCPK;T(0.993)VEIT(0.002)DS(0.002)T(0.002)MCPK 42.556000000000004 0.038682999999999995 3766800.0 814.63 1146.62 780.9100000000001 782.85 1448.67 1070.1599999999999 799.12 765.6800000000001 1312.68 1278.9499999999998 1127.12 True False 952.119628208694 1204.9780603900012 891.6547804556667 974.6482851434715 1235.5725620415444 1183.4036208852847 944.3097600231746 874.2174847966558 1015.3600759192169 990.0343067306485 847.2249970705162 1.1238096509202116 1.4222645277895507 1.0524415397784261 1.150400765456109 1.4583759524492703 1.3967996989904532 1.1145914760404287 1.0318598811643571 1.1984538693146072 1.1685612560464218 1.0 9.726601345934117 -10.532466278157028 0.32427754799982383 0.9246199089861847 1.2553677812313002 0.10090974299330036 0.14602083887139478 3.1121620915357906 0.457823565909031 0.37526471771292186 0.06502961831322449 2.934497351237572e-11 10.532466278157028 0.3307478722451155 T(ph)VFSPTLPAAR ddPTM_A549_MK2206_60min_R1 1 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.672)VFS(0.326)PT(0.002)LPAAR 116.77 1.9736e-05 169070000.0 2182.9 2553.6 1831.3 1772.9 3823.5 2252.3 2303.9 2031.0 3829.2 3496.6 3976.1 True False 2551.320153218954 2683.5673326925294 2091.0058770517235 2207.2605795885056 3261.068214959821 2490.6368910442598 2722.4888078353597 2318.9004696766383 2961.892313975885 2706.7156315058346 2988.7246352225848 0.8536484502959052 0.8978971501978706 0.6996314924462742 0.7385292554474896 1.0911236774802284 0.8333443843208961 0.9109199207415783 0.7758829442993963 0.9910221500734873 0.9056423598235749 1.0 11.545314265753278 -8.786402927810876 22.409459140658406 0.9957606016332913 0.8524793042311115 0.18851208990819757 0.10143181001172255 61.303475264770874 55030.79426562964 0.01672959182353351 0.017816443099561 1.6352986272866532e-09 8.786402927810876 -0.14328129740217976 T(ph)VFSPTLPAAR ddPTM_A549_PD325901_60min_R1 1 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.5)VFS(0.5)PTLPAAR 141.71 3.2726999999999993e-11 274570000.0 4800.2 4681.3 4475.5 4330.2 5258.3 5667.0 4753.0 5437.5 5041.5 4893.2 5709.2 True False 5287.512770279531 5075.80958002378 4779.234343367802 4597.666619402269 4888.975148150212 5620.849830887859 4933.878015941398 5329.044796863772 4829.623287288509 4584.242516921266 5007.004593600655 1.0560231514541423 1.0137417462151048 0.9545096781968281 0.9182469345601255 0.9764271345783675 1.122597298606785 0.9853951446833664 1.0643179364514084 0.964573368568734 0.9155658700174326 1.0 12.289732063663113 -5.383859959025119 3.7770818071702337 0.991406189770425 1.0559625778394193 0.1040226906377969 0.05731191771496531 0.4048811913167976 9.118507472146527 0.007207097977539748 0.055551596315621975 4.131807132195816e-06 5.383859959025119 0.06455638806899422 T(ph)VGTRRQLGLVPR ddPTM_A549_PD325901_60min_R1 2 TVGTRRQLGLVPR 13 2 P52948-2;P52948-5;P52948;A0A3B3ITD8 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.5)VGT(0.5)RRQLGLVPR;T(0.5)VGT(0.5)RRQLGLVPR 44.294 0.021409 80745000.0 7112.0 6821.5 7683.3 5337.51 6868.200000000001 4878.38 7310.200000000001 7152.900000000001 7261.6 8047.4 6934.799999999999 True False 7834.005004422314 7396.371745056335 8204.73494143622 5667.195870335278 6385.801326003705 4838.652090701737 7588.393661294934 7010.2297981585 6956.420204894221 7539.285790622125 6081.863563319172 1.2880928555633222 1.216135756425909 1.3490494905082173 0.9318189747818696 1.0499744460756466 0.7955870828613338 1.2477086311277878 1.1526450281519753 1.1437974779391074 1.2396341535993889 1.0 12.57029773688567 -6.252125329522389 24.963550239356397 1.060133433047629 1.27759701110354 0.35270612698747805 0.12867321842520402 516.6206179164548 1384644.9586325767 0.016636597702860457 0.04334924189181755 5.595960888944747e-07 6.252125329522389 0.21746357805591088 T(ph)VHRSPLLLGAQR ddPTM_A549_PD325901_60min_R1 1 TVHRSPLLLGAQR 13 1 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 T(0.508)VHRS(0.492)PLLLGAQR 86.641 0.00011656 4548300.0 235.21 477.63 335.27 402.78 600.41 390.32 305.76 297.83 358.15 373.39 324.62 True False 259.08834604754975 517.8815563426308 358.02343834229066 427.6588058202498 558.2392729020531 387.1413633301837 317.39586411829214 291.88954700688487 343.0982010001743 349.8140916768638 284.69379793572557 0.9100596778931002 1.8190826779428166 1.2575737193372947 1.5021711358699883 1.9608410051422513 1.3598517640260903 1.11486750473556 1.0252753980709612 1.2051481398187485 1.2287380133087418 1.0 8.153267254035676 -7.660333614197928 4.128381492916938 1.0938188229217127 1.5090202967766593 0.3103080363109403 0.26471886392644 0.1766453072028706 5.545733694831368 0.03797033102379214 0.056818810869242016 2.1860816853174364e-08 7.660333614197928 0.41520147385494655 T(ph)VITEEFKVPDK ddPTM_A549_PD325901_60min_R1 1 TVITEEFKVPDK 12 1 Q96I24-2;Q96I24 Q96I24-2 FUBP3 Far upstream element-binding protein 3 1 T(1)VITEEFKVPDK 83.729 0.00021406 3524200.0 927.76 1052.8 789.53 706.41 1216.2 705.78 991.38 1117.7 1222.2 1012.4 1138.9 True False 1021.9455122191855 1141.5231508019217 843.1122536295785 750.0433413264876 1130.7783076622263 700.0323616806135 1029.1075084039514 1095.406596681313 1170.835184314988 948.4768912227346 998.8225200819356 1.02315025109301 1.142868855928759 0.8441061716954641 0.7509275434287964 1.1321113460371979 0.7008576074387953 1.0303206903259765 1.096697936477698 1.172215444460485 0.9495950202894193 1.0 9.964084539319044 -7.989477499802787 24.912182859230384 1.0837378818057686 0.9326357351515937 0.13633367079948022 0.14134432338766081 251.23358309630157 594796.7083485866 0.021595560683125584 0.02982203033842942 1.0245248581531421e-08 7.989477499802787 -0.15110214665417487 T(ph)VPVADVLAR ddPTM_A549_PD325901_60min_R1 2 TVPVADVLAR 10 0 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 T(1)VPVADVLAR;T(1)VPVADVLAR 60.434 0.0084899 2789900.0 639.94 721.9300000000001 562.52 791.7 1002.8100000000001 608.44 741.94 690.36 604.0699999999999 784.81 590.04 True False 704.906237701071 782.7695747135551 600.6959899075532 840.6015109188437 932.3760851066909 603.4850663676393 770.1749327051467 676.5902282230574 578.6830386100107 735.2569626634872 517.468820571732 1.362219731272401 1.5126893516960158 1.1608351383255646 1.6244486189333969 1.8018014768050052 1.1662249827938835 1.4883504127924254 1.3074995078457443 1.1182954713496467 1.4208720089668965 1.0 9.015328127243322 -8.691424308966045 1.1307685264786036 1.0351983738260082 1.4590117978446693 0.15873347029152174 0.2099965526665843 0.25171911177067363 0.6332147842507276 0.036016886468268915 0.03928225883182436 2.0350528442241535e-09 8.691424308966045 0.42381342401866107 T(ph)VSDLALQNAFGDR ddPTM_A549_PD325901_60min_R1 1 TVSDLALQNAFGDR 14 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 T(0.716)VS(0.284)DLALQNAFGDR 163.23 2.3315000000000004e-19 6549000.0 1408.0 1927.0 1552.8 1708.9 1896.8 1944.3 1829.0 2028.9 2175.8 2225.2 2295.3 True False 1550.9391234851826 2089.3950528070886 1658.1823457449495 1814.4548718065091 1763.5753116047613 1928.4662654306094 1898.6035958672019 1988.4319978587398 2084.3586925483173 2084.7004922449923 2012.9926511055126 0.7704643743400774 1.037954635184394 0.8237398903738147 0.9013718310447041 0.8760962493510475 0.9580095905325425 0.9431746284938052 0.9877989354639302 1.035452708386 1.0356225051790917 1.0 10.975126190039578 -7.862468318877076 1.1381250746256424 1.0165739027154916 0.8881351094087119 0.4621457687961452 0.06325214708806667 0.286964104541262 0.749258523069784 0.010198392336331295 0.016093060428316673 1.372561083602265e-08 7.862468318877076 -0.12843879330677976 T(ph)VSDNS(ph)LSNSR ddPTM_A549_PD325901_60min_R1 1 TVSDNSLSNSR 11 0 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 2 T(0.551)VS(0.449)DNS(0.844)LS(0.156)NSR 127.27 1.8762e-07 23490000.0 1980.2 1617.5 1913.1 1932.2 1844.7 1990.9 1822.2 2236.9 1952.4 1782.2 2493.5 True False 2181.228446253807 1753.8124016167433 2042.9344704048576 2051.5476056554135 1715.1346358695193 1974.6867704807912 1891.5448181461004 2192.283274685898 1870.3474176538898 1669.6715878478446 2186.815307598828 0.9974452065862134 0.8019938380358552 0.9342053091113787 0.9381439751800799 0.7843070376861297 0.9029965921763377 0.8649769423020268 1.0025004247354907 0.8552836680604605 0.7635174228230465 1.0 11.094615664141388 -10.945989915974174 1.0310450886887932 1.0044008335446766 0.8926218078649577 0.0 0.09682340510675749 0.6162022189144036 1.0843776607116529 0.053436211453651704 0.010596954683781053 1.1324266571157647e-11 10.945989915974174 -0.11177902567971887 T(ph)VSDNSLSNSRGEGKPDLK ddPTM_A549_MK2206_60min_R1 1 TVSDNSLSNSRGEGKPDLK 19 2 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 1 T(0.438)VS(0.384)DNS(0.059)LS(0.059)NS(0.059)RGEGKPDLK 42.611999999999995 0.024499 6349300.0 1001.4 1357.4 1282.6 1252.8 2164.4 1152.3 865.12 1043.2 2168.2 2566.6 2576.0 True False 1170.4118381206024 1426.4858620758296 1464.491966311659 1559.7360562403283 1846.0196271633417 1274.2356211651647 1022.3011057053372 1191.076794666012 1677.1061619039265 1986.8032774188853 1936.308106016797 0.6044553728219787 0.736703966503694 0.7563320949599718 0.805520594265796 0.9533708098556749 0.6580748266278812 0.5279640685946027 0.6151277221661745 0.8661360021644087 1.0260780664219613 1.0 10.919092817675363 -9.07439681016468 2.4752377659021776 0.9504073778941963 0.7146890313647389 0.5053585683594726 0.11336939404793078 0.18574806007127304 2.3417798345651235 0.023714527764855005 0.023225337104177186 8.425645638419753e-10 9.07439681016468 -0.23571834652945733 T(ph)VSEPNLK ddPTM_A549_PD325901_60min_R1 1 TVSEPNLK 8 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6;C9JF80;C9JAH2 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.545)VS(0.455)EPNLK 104.05 0.0022173 54857000.0 10937.0 10894.0 9238.9 10860.0 11752.0 11648.0 10890.0 11152.0 11196.0 11530.0 11236.0 True False 12047.316188606139 11812.07561249633 9865.907312018939 11530.79753515049 10926.580062199057 11553.142549882092 11304.42490923665 10929.564611425243 10725.47105513878 10801.993832277894 9854.04323087244 1.2225759423159661 1.1987034495129298 1.001203981032814 1.170159016455786 1.1088423103286567 1.1724266150656233 1.1471864537614576 1.1091451859256336 1.0884335296537142 1.096199151880677 1.0 13.266500085602672 -9.990295738085743 0.3271265582340766 0.9669515920311242 1.1568501147651544 0.21304300504680418 0.06159711794681988 1.3296102664379656 0.26738197983240564 0.09386573566003827 0.027788478763169977 1.0225964057294146e-10 9.990295738085743 0.18989852273403018 T(ph)VSKVDDFLANEAK ddPTM_A549_MK2206_60min_R1 2 TVSKVDDFLANEAK 14 1 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 1 T(0.858)VS(0.142)KVDDFLANEAK;T(0.535)VS(0.465)KVDDFLANEAK 70.942 0.00083855 3064600.0 1927.4299999999998 2503.23 1893.73 2230.35 3165.6 2267.4 2025.44 2078.63 3445.5 3224.7000000000003 3081.7 True False 2252.733062860788 2630.6337148401954 2162.289389804598 2776.7858501242167 2699.944433444962 2507.3347630216913 2393.4362302799827 2373.2821680373977 2665.099751332893 2496.2380303485843 2316.4288394068176 0.9725025973332552 1.1356419286827037 0.9334581546473533 1.1987356584781967 1.1655632961884355 1.082413895202479 1.0332440131823282 1.0245435247840977 1.150520881969058 1.0776234468691088 1.0 11.177686648185105 -11.130165980760536 1.4989603341478095 1.0001026773812756 1.0883156948677928 0.0 0.08213102066120458 0.6443884559188608 2.597539812530375 0.05594463186556435 0.012099635846373387 7.410269779090574e-12 11.130165980760536 0.08821301748651722 T(ph)VSKVDDFLANEAK ddPTM_A549_PD325901_60min_R1 4 TVSKVDDFLANEAK 14 1 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 1 T(0.977)VS(0.023)KVDDFLANEAK;T(0.552)VS(0.448)KVDDFLANEAK;T(0.995)VS(0.005)KVDDFLANEAK;T(0.5)VS(0.5)KVDDFLANEAK 135.28 2.0016e-09 12159900.0 4618.95 5404.82 5170.679999999999 4630.63 5257.07 5714.1 5217.0 5122.0 5364.86 6316.2 5948.599999999999 True False 5087.862403708728 5860.303149617443 5521.593438624736 4916.653498176238 4887.831539106939 5667.566264103818 5415.535789851939 5019.837691868731 5139.393591003201 5917.394054070562 5216.959911282289 0.9752542649801905 1.1233176503702564 1.0583929208816885 0.9424365112607818 0.9369118456395321 1.08637335929054 1.0380635239577376 0.9622151170862444 0.9851318925968089 1.1342609785583173 1.0 12.348993631959802 -6.182257750082219 12.111035857330156 0.9938229779464497 1.0595040962106372 0.02729019014554457 0.06633868528611583 1.0937260313267765 165.18818357175422 0.0067660814211383145 0.017911146650883347 6.572676388222e-07 6.182257750082219 0.06568111826418754 T(ph)VSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQR ddPTM_A549_MK2206_60min_R1 1 TVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQR 36 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.122)VS(0.116)S(0.116)DGCS(0.104)T(0.104)PS(0.104)REEGGCS(0.104)LAS(0.104)T(0.104)PAT(0.018)T(0.003)LHLLQLSGQR 46.54 0.004185 1786200.0 237.66 495.22 583.88 364.81 537.72 507.66 417.47 466.1 724.88 624.43 820.24 True False 277.7711977708631 520.424582744359 666.6829637377602 454.18846637694304 458.62210031337685 561.3802442425654 493.31889518079214 532.171102371384 560.6958373954974 483.3708293145304 616.5517705276466 0.4505237208761007 0.8440890248340027 1.081308976158176 0.7366590902630081 0.7438501067329462 0.9105159875903603 0.8001256646438767 0.863140984764265 0.9094059318257289 0.7839906596989583 1.0 9.26807822949233 -2.102750297236805 0.11580739170109748 1.0566299672526982 3.898581832486959e-12 0.12249796195611251 0.14656574410009443 81.85924755997611 0.6478035297214502 0.5376376086702614 13.932772682462675 0.007893138125153602 2.102750297236805 -1.0566299672487995 T(ph)VTPAK ddPTM_A549_MK2206_60min_R1 2 TVTPAK 6 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 T(0.867)VT(0.133)PAK;T(0.987)VT(0.013)PAK 90.37 0.039842 1423350000.0 14555.0 12089.3 10614.8 9644.4 24101.0 19922.9 17953.9 19167.0 23092.0 18561.9 19747.8 True False 17011.528164415187 12704.593732424726 12120.138253551377 12007.27843295357 20555.77482640165 22031.128054249293 21215.891230954152 21883.9809464757 17861.69887034657 14368.753898200579 14843.876248446626 1.1460300449618341 0.8558811404638481 0.8165076325545167 0.8089045093063276 1.384798315638933 1.4841896877545577 1.429268937294889 1.4742767037528897 1.2033042159197298 0.9679920296899694 1.0 13.85758025817822 -6.749807423443812 24.98848634511805 1.1993233153022023 0.8967398791502535 0.42481771438618443 0.19429392946702914 225.15648187551906 483691.76204708114 0.03239283933548659 0.06698746678976779 1.7790681164963436e-07 6.749807423443812 -0.3025834361519487 T(ph)VTPAK ddPTM_A549_PD325901_60min_R1 4 TVTPAK 6 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 T(0.987)VT(0.013)PAK;T(0.992)VT(0.008)PAK;T(0.928)VT(0.072)PAK;T(0.993)VT(0.007)PAK 98.62899999999999 0.036105 1505860000.0 51052.0 44259.7 38923.1 38751.4 41213.0 33072.9 29623.5 34500.6 40245.799999999996 47067.5 57526.5 True False 56234.761457503955 47989.62024843067 41564.65562961437 41144.98596718516 38318.341057131496 32803.56526768504 30750.83850310119 33812.458467802906 38554.40898453951 44095.65001741018 50451.10519052899 1.114638841807983 0.9512104852251996 0.8238601606970773 0.8155418164141459 0.7595144033499758 0.6502050875556069 0.6095176386517284 0.670202532533428 0.7641935461857273 0.8740274341044189 1.0 15.622598253151272 -5.420506286503061 2.052056569363091 0.8202353144381976 1.1492223005071829 0.4280226044951715 0.11210946837101286 0.5454390402354489 3.1642490100099065 0.021175322323919298 0.29315634108554306 3.7974644202272337e-06 5.420506286503061 0.32898698606898524 T(ph)VTPASSAK ddPTM_A549_MK2206_60min_R1 1 TVTPASSAK 9 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.393)VT(0.265)PAS(0.191)S(0.15)AK 68.626 0.0046386000000000005 9495500.0 3562.2 3946.6 3621.7 3330.1 5245.9 3592.4 3721.0 3650.5 5452.6 5075.2 5213.6 True False 4163.412272571607 4147.465082708464 4135.311519094755 4145.974649493868 4474.235059201707 3972.5453835578733 4397.057534595848 4167.96955418738 4217.594806012981 3928.7087951205176 3918.9192319600834 1.0623878743449475 1.0583185917394045 1.0552173378236327 1.0579382743288182 1.141701268735737 1.0136839134525792 1.1220076950645954 1.0635507668022879 1.076213761084204 1.002498026262087 1.0 11.936240124289782 -10.636181398816882 0.7770601284772015 0.9969351932612679 1.0728768762864838 0.412614615199569 0.0325808854449391 0.5350913835632779 0.5401452065331052 0.024852959815445413 0.005733999849925199 2.3110992742477023e-11 10.636181398816882 0.07594168302521587 T(ph)VTPASSAK ddPTM_A549_PD325901_60min_R1 1 TVTPASSAK 9 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.995)VT(0.005)PASSAK 138.25 4.5601000000000006e-05 76215000.0 15920.0 16635.0 17006.0 16325.0 20482.0 17700.0 17025.0 18532.0 16926.0 16836.0 19133.0 True False 17536.18668031543 18036.889830537584 18160.129425385498 17333.358173234967 19043.41497906407 17555.857068416295 17672.895691437465 18162.364721927246 16214.659081750526 15772.97208675026 16779.762294079977 1.045079565072404 1.0749192696788756 1.0822638072645716 1.032991878517272 1.1349037397140438 1.0462518336514295 1.0532268206011828 1.0823970211029188 0.9663223350590119 0.939999733626446 1.0 14.034434657926646 -8.759508804696749 24.999948772869818 0.9840966556377813 1.0693553100704707 0.6821783659180722 0.029974483933244603 20.729064042701427 268430.3232499085 0.004524620736243662 0.005005701561711415 1.7397674263953855e-09 8.759508804696749 0.08525865443268943 T(ph)VVSKR ddPTM_A549_PD325901_60min_R1 1 TVVSKR 6 1 F5H5Q8;Q9BR77 F5H5Q8 CCDC77 Coiled-coil domain-containing protein 77 1 T(1)VVSKR 73.931 0.028824000000000002 10671000.0 2892.1 2552.8 2549.9 3008.6 3343.0 2548.3 3098.4 3042.4 2876.1 3088.2 3249.7 True False 3185.703862948508 2767.93341505238 2722.951547794337 3194.434388973642 3108.1992127239123 2527.5474896861724 3216.311307509538 2981.716945283371 2755.2275189071675 2893.21052496449 2850.0075015455845 1.1177878869514808 0.9712021507140963 0.9554190809384382 1.1208512213533723 1.0905933444169211 0.8868564339972652 1.1285273129159497 1.046213718267885 0.9667439532748539 1.0151589156854768 1.0 11.476750001282754 -8.75592590177105 24.76879970122296 0.9842957552435927 1.0368601030682927 0.06570902284291691 0.0738138798467605 210.16163191691388 944127.9116559111 0.011972034227147826 0.01338329441174862 1.7541797700381076e-09 8.75592590177105 0.052564347824699986 T(ph)YDYLFK ddPTM_A549_PD325901_60min_R1 2 TYDYLFK 7 0 P61006;H0YMN7;H0YNE9;Q92930;H0YLJ8;H0YL94;P61006-2 P61006;P61006-2 RAB8A;RAB8B Ras-related protein Rab-8A;Ras-related protein Rab-8B 1 T(0.549)Y(0.402)DY(0.049)LFK;T(0.598)Y(0.402)DYLFK 91.602 0.013122 3342400.0 2839.2 2756.5 3501.8999999999996 2998.1 3601.8999999999996 3397.4 3044.1 2890.4 3517.2 3575.8999999999996 3850.7999999999997 True False 3127.433493891428 2988.799928937591 3739.5599926353925 3183.2858278208746 3348.9149698804254 3369.732700804382 3159.9448912954367 2832.748704525065 3369.38431539247 3350.1170637330865 3377.176012232432 0.9260498957009008 0.8849997507123974 1.1073038476793549 0.9425880724874066 0.9916317532015972 0.9977959954112283 0.9356766955141914 0.8387921429811763 0.9976928366150476 0.9919876996634657 1.0 11.721601656591876 -8.939960747931043 24.99999999999712 0.9989845198558116 0.95534367947326 0.08085173199966733 0.06480814707872634 137.7045943644583 57339.05054077133 0.011113126876968886 0.01183063881904907 1.1482573977217435e-09 8.939960747931043 -0.04364084038255156 T(ph)YSFEQPWPNAR ddPTM_A549_MK2206_60min_R1 1 TYSFEQPWPNAR 12 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 T(0.831)YS(0.169)FEQPWPNAR 146.67 6.9019e-12 18843000.0 2122.2 2842.1 1575.2 1784.1 4211.7 3706.3 3129.2 3766.4 5544.9 5186.7 4920.9 True False 2480.3754771914737 2986.7507504093987 1798.5870461048844 2221.2045800912924 3592.164509205255 4098.498205957175 3697.7351349791224 4300.2987341162425 4288.989003385793 4015.0208676804054 3698.904720069119 0.6705702538737264 0.8074689607991815 0.48624854712972315 0.60050332414342 0.9711427519923062 1.1080302187077122 0.9996838023202786 1.1625870519951877 1.1595294629015607 1.085462095278134 1.0 11.852882423281828 -6.866568290140748 4.064779977694479 1.078815319182158 0.6419238491186605 0.8515914107480469 0.08684291221489637 0.067832718645559 2.0658079795860433 0.014056326483397222 0.02760071898700956 1.359664347603922e-07 6.866568290140748 -0.4368914700634974 T(ph)YSFEQPWPNAR ddPTM_A549_PD325901_60min_R1 1 TYSFEQPWPNAR 12 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 T(0.603)YS(0.397)FEQPWPNAR 137.84 2.0679e-08 30354000.0 5564.8 5052.4 4913.0 5277.2 5928.9 5452.4 5075.4 5121.9 5994.4 5640.6 6195.6 True False 6129.7343994107605 5478.18347939934 5246.425724269023 5603.160658609224 5512.474517594621 5407.997462137455 5268.5471243654465 5019.7396864471775 5742.476214087519 5284.451553369185 5433.580477144295 1.1281206609885972 1.008208768130455 0.9655559067059895 1.0312096567223485 1.0145197150906633 0.9952916837958962 0.9696271448498753 0.9238364477276283 1.0568493902395588 0.9725542072299465 1.0 12.407687465071428 -3.9325576710472308 13.191414034138987 1.0153036475422133 1.0159127987438836 0.0 0.052351351877790706 0.0 0.0 0.006651610833873712 0.0 0.00011679986181136346 3.9325576710472308 0.0006091512016703771 T(ph)YSIDGPNASRPQSARPSINEIPER ddPTM_A549_MK2206_60min_R1 1 TYSIDGPNASRPQSARPSINEIPER 25 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.497)Y(0.001)S(0.47)IDGPNAS(0.024)RPQS(0.007)ARPS(0.002)INEIPER 43.31 0.046656 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 T(ph)YSMICLAIDDDDKTDKTK ddPTM_A549_MK2206_60min_R1 1 TYSMICLAIDDDDKTDKTK 19 2 Q8IUC4;Q8IUC4-2 Q8IUC4 RHPN2 Rhophilin-2 1 T(0.524)Y(0.016)S(0.46)MICLAIDDDDKTDKTK 83.60600000000001 4.562e-05 8694600.0 1069.9 1251.6 1247.8 1263.7 1955.3 1498.3 1283.7 1318.0 2158.3 1701.7 1569.2 True False 1250.4729634563928 1315.3010939841681 1424.7568030279813 1573.3065567296485 1667.6779601702465 1656.849111508953 1516.9316735180566 1504.8305362057158 1669.4484960968741 1317.2847881180219 1179.5243322832125 1.0601502056645533 1.1151114546642134 1.2079079371513013 1.3338483265404024 1.4138563440587206 1.404675652855571 1.2860537353915562 1.2757943986562839 1.4153574033231788 1.1167932293250327 1.0 10.203989464750478 -3.9455700764299535 12.628802225140408 1.2324393422437185 1.2410765722443464 0.0 0.14223146287711147 0.0 0.0 0.02359211978353832 0.0 0.00011335219217163026 3.9455700764299535 0.008637230000627882 T(ph)YSMICLAIDDDDKTDKTK ddPTM_A549_PD325901_60min_R1 1 TYSMICLAIDDDDKTDKTK 19 2 Q8IUC4;Q8IUC4-2 Q8IUC4 RHPN2 Rhophilin-2 1 T(0.5)YS(0.5)MICLAIDDDDKTDKTK 151.33 1.1559e-21 15431000.0 5448.8 5485.7 6310.5 5977.9 5158.2 6367.8 6509.5 6818.2 5685.3 6277.2 6200.1 True False 6001.95816480545 5947.999191065827 6738.768478119205 6347.141306204061 4795.905826823958 6315.942748037364 6757.222584635082 6682.205652225575 5446.366612163319 5880.856520726346 5437.527005672147 1.1038029160212937 1.0938794758832795 1.2393075880063988 1.167284557774711 0.8820012887882885 1.1615469204012963 1.242701429820265 1.22890528088505 1.0016256666830252 1.0815314599066341 1.0 12.408734945725074 -8.790808701523714 23.798058453963044 1.0007675942098893 1.1381669697030727 0.1923818221966167 0.09819833225866212 111.66048943233876 90478.20655364958 0.01693092979563838 0.01802616398674879 1.6187929281840287e-09 8.790808701523714 0.13739937549318348 T(ph)YTHEVVTLWYR ddPTM_A549_PD325901_60min_R1 3 TYTHEVVTLWYR 12 0 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 T(0.547)Y(0.004)T(0.449)HEVVTLWYR;T(0.668)YT(0.332)HEVVTLWYR;T(0.533)Y(0.023)T(0.444)HEVVTLWYR 117.03 2.4126e-05 116360200.0 6553.98 6793.42 7065.870000000001 6465.76 8035.29 8058.9 7559.85 7885.5199999999995 7608.32 8179.299999999999 7537.039999999999 True False 7219.335224814932 7365.925344909566 7545.402428728015 6865.135310393615 7470.918950645626 7993.2709903197765 7847.544228658658 7728.237117529227 7288.568769045505 7662.857602111925 6610.03186123308 1.0921785819453205 1.1143554977563264 1.1415077244908234 1.0385933766305548 1.1302394765237864 1.2092636099379797 1.187217307481287 1.1691679071706547 1.1026525926133504 1.1592769540270331 1.0 12.690441510393871 -9.99227089587017 0.870380996013984 1.0100214924652087 1.1336881312061287 0.0 0.06318835154917707 0.32426036290850235 0.4979666801668537 0.020246024672364697 0.00985339113199529 1.0179562287970787e-10 9.99227089587017 0.12366663874091999 TAAAAAEHSQR ddPTM_A549_MK2206_60min_R1 2 TAAAAAEHSQR 11 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 ; 89.40299999999999 0.00032460000000000003 5025200.0 1326.9 1013.16 748.22 779.71 1149.8899999999999 761.02 804.11 634.74 997.28 1636.01 2047.57 False True 1550.8482804096527 1064.7255164437513 854.3288468998202 970.7389850025122 980.7427042500726 841.5506312758088 950.2063784315678 724.7163388097246 771.3976723289119 1266.4342047417088 1539.101858942862 1.0076319974526304 0.6917836595786208 0.5550827204423099 0.6307178302476146 0.6372175425242482 0.5467803358082037 0.6173771884625107 0.4708696403677264 0.5011998834558937 0.8228397603337079 1.0 10.58787299815339 -10.85112893539114 1.105261712660803 0.9993719358502969 0.6137969021169999 0.3405038807885915 0.14434474091559674 0.3256708729443186 0.708122528232768 0.09589295865363871 0.023567486640836487 1.4088704642278014e-11 10.85112893539114 -0.38557503373329705 TAAAAAEHSQR ddPTM_A549_PD325901_60min_R1 2 TAAAAAEHSQR 11 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 ; 100.93 0.00027753 6636000.0 2893.53 3258.67 2452.84 2961.43 3221.1 2416.52 2559.34 2524.1 2691.0 3328.9 3860.3 False True 3187.279035495796 3533.2895572033576 2619.3044725251425 3144.350805204488 2994.8610481917426 2396.840662314654 2656.737084224586 2473.7548453818567 2577.9066282045765 3118.7126858863726 3385.507572457893 0.9414479121019417 1.0436513525911786 0.7736814691640215 0.9287679137936992 0.8846121250933906 0.7079708466209507 0.7847381898767349 0.7306895029586067 0.7614535111888718 0.921195011128619 1.0 11.725156430832275 -5.754345095364472 24.997705530302873 0.8529053646297636 0.9925496437169522 0.28980273364964393 0.09220181705683374 210.56815753486183 741946.3466598374 0.015774980294068625 0.05857028075704916 1.7605765161998069e-06 5.754345095364472 0.13964427908718857 TAAALAPAS(ph)LTSAR ddPTM_A549_PD325901_60min_R1 1 TAAALAPASLTSAR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TAAALAPAS(0.696)LT(0.152)S(0.152)AR 79.771 0.00056079 5670100.0 1565.1 1615.0 1235.0 1906.6 2049.9 1776.7 1820.8 1833.4 1817.1 1883.7 2037.8 True False 1723.987799834276 1751.1017178429936 1318.814526658302 2024.366351797231 1905.9220957710888 1762.2311442630084 1890.0915403799913 1796.8313987255235 1740.7336061354652 1764.7628605257466 1787.163518678521 0.9646502862306864 0.9798217675894635 0.7379372468577864 1.1327258701509888 1.06645087360578 0.9860491923906614 1.0575929514147526 1.0054096225364713 0.9740203333059375 0.9874658038178072 1.0 10.803455926200943 -6.275112290523971 24.99908740584566 1.0070098914905525 0.9027049469049082 0.36465241858705477 0.07433973712084507 719.9635366775597 1316355.8393771877 0.010178046692325207 0.023764195354511502 5.307471972964834e-07 6.275112290523971 -0.10430494458564432 TAADVVS(ph)PGANSVDSR ddPTM_A549_MK2206_60min_R1 4 TAADVVSPGANSVDSR 16 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 TAADVVS(0.93)PGANS(0.07)VDS(0.001)R;TAADVVS(0.945)PGANS(0.054)VDS(0.001)R;TAADVVS(1)PGANSVDSR;TAADVVS(0.973)PGANS(0.026)VDS(0.001)R 173.51 4.1019e-28 58854400.0 7591.849999999999 8996.34 8290.99 7169.35 11496.2 9090.48 8519.39 8587.56 11416.7 10252.0 11974.6 True False 8873.168677087968 9454.215279525028 9466.77705268228 8925.841071844356 9805.12420892405 10052.42855982774 10067.252886229642 9804.872928299512 8830.835678723615 7936.066079676775 9000.976337852766 0.9858006891733161 1.0503544198606776 1.0517500210361217 0.9916525426589073 1.0893400716641721 1.1168153523027486 1.1184623210143048 1.089312154623275 0.9810975328961103 0.8816894725411498 1.0 13.135865784035774 -8.769304849047337 24.943938573649877 0.9910738298793079 1.0632945823121565 0.4060979515197072 0.05295451708639128 136.26662314509267 432144.65918873786 0.007637670428135336 0.008203469771623405 1.7009641130137742e-09 8.769304849047337 0.07222075243284853 TAADVVS(ph)PGANSVDSR ddPTM_A549_PD325901_60min_R1 4 TAADVVSPGANSVDSR 16 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 TAADVVS(0.765)PGANS(0.23)VDS(0.006)R;TAADVVS(0.989)PGANS(0.011)VDSR;TAADVVS(1)PGANSVDSR;TAADVVS(1)PGANSVDSR 263.49 3.2433e-91 90911300.0 16980.89 16934.170000000002 16878.809999999998 16518.3 19359.559999999998 17792.71 16604.19 17280.16 17333.54 17119.71 21630.79 True False 18704.777452129474 18361.271936374793 18024.307547129894 17538.597875218824 17999.811292456274 17647.812068914194 17236.071536611405 16935.493652776724 16605.071592809065 16038.768588932011 18970.339958875345 0.9860011730247551 0.9678936685467464 0.9501309721493502 0.9245273365284803 0.9488396798094804 0.9302844391387725 0.908580002992906 0.8927353800453844 0.8753175551311256 0.8454655332324823 1.0 14.21145791241528 -5.703526298889678 1.59487359241368 0.9329392448541675 0.9880456069754129 0.18805530333724385 0.04052217661963112 0.8793802164367291 3.5704226906969794 0.006758419076852034 0.05795363024466176 1.9791271707093248e-06 5.703526298889678 0.05510636212124542 TAAELLQSQGSQAGGS(ph)QTLKR ddPTM_A549_MK2206_60min_R1 1 TAAELLQSQGSQAGGSQTLKR 21 1 B1AMS2;Q14141-2;Q14141-4;Q14141 B1AMS2 SEPT6 Septin-6 1 TAAELLQSQGS(0.002)QAGGS(0.576)QT(0.423)LKR 102.27 4.843299999999999e-10 7249900.0 1759.7 1836.7 1780.3 1628.8 2540.6 2031.4 1803.5 1658.5 3414.5 2363.7 3432.8 True False 2056.694339465572 1930.1801848200066 2032.773310170471 2027.8560731196114 2166.8811055124684 2246.361399665813 2131.172605117874 1893.5974539432316 2641.1212018360648 1829.738528339055 2580.341019539774 0.7970629943449881 0.7480329809911214 0.787792502920034 0.7858868489721165 0.8397653988769864 0.8705676430576882 0.8259267240180473 0.7338555018905877 1.023555096724049 0.7091072515156948 1.0 11.333346030421769 -8.770659530311638 24.999597285678547 1.0111232598009052 0.8008214618451097 0.0 0.09824893921615536 47.16230606634261 127875.88893778407 0.006777857179813361 0.0072640995079751285 1.6956666150372733e-09 8.770659530311638 -0.2103017979557955 TAAELLQSQGSQAGGS(ph)QTLKR ddPTM_A549_PD325901_60min_R1 1 TAAELLQSQGSQAGGSQTLKR 21 1 B1AMS2;Q14141-2;Q14141-4;Q14141 B1AMS2 SEPT6 Septin-6 1 TAAELLQSQGSQAGGS(0.597)QT(0.403)LKR 154.69 9.7444e-28 11190000.0 3672.6 2970.1 3546.3 3365.8 3200.7 3166.5 3884.7 4011.9 4183.6 4251.3 4705.7 True False 4045.4396483747746 3220.4007505668555 3786.9732436342815 3573.697821713584 2975.8938738155634 3140.7130738497294 4032.534384289406 3931.8795072253333 4007.7778408608965 3982.872192468603 4126.928731890039 0.9802543031854238 0.7803383483901322 0.9176250644628735 0.8659460954822237 0.7210916560831115 0.761029152158718 0.9771272164524628 0.9527374380959137 0.9711284350251975 0.9650935238332886 1.0 12.010852809259374 -7.783513812838222 23.467771011683407 0.9823328620066639 0.8347207147712166 0.48838790446245794 0.06873234356171881 68.63029035532904 72961.93090793405 0.010522003846578464 0.014546759379055729 1.6462136072843883e-08 7.783513812838222 -0.14761214723544736 TAAELLQSQGSQAGGSQT(ph)LKR ddPTM_A549_MK2206_60min_R1 1 TAAELLQSQGSQAGGSQTLKR 21 1 B1AMS2;Q14141-2;Q14141-4;Q14141 B1AMS2 SEPT6 Septin-6 1 TAAELLQSQGSQAGGS(0.259)QT(0.741)LKR 95.652 7.7336e-07 8103500.0 2475.9 3018.0 2266.5 2613.3 3541.8 2860.6 2531.4 2555.4 4035.2 3865.9 4115.4 True False 2893.7713900567187 3171.6033090797505 2587.9237811050807 3253.5586173154966 3020.8059117940884 3163.3067932874014 2991.322613027661 2917.635775584285 3121.233642890288 2992.590505015844 3093.432600738168 0.9354564212474501 1.0252698921977252 0.8365864446141609 1.051763214928012 0.9765222979395934 1.0225879149694614 0.966991364969083 0.9431709534864495 1.0089871174647498 0.9674012306916723 1.0 11.594992885725295 -5.908029887122794 0.33423395732950095 1.0035747409890505 0.9235431656188383 0.026113387815427602 0.05511886152602073 7.930895828268816 0.831071799261336 0.017668452543377382 0.24000502037204718 1.2358623813813276e-06 5.908029887122794 -0.08003157537021222 TAAELLQSQGSQAGGSQT(ph)LKR ddPTM_A549_PD325901_60min_R1 1 TAAELLQSQGSQAGGSQTLKR 21 1 B1AMS2;Q14141-2;Q14141-4;Q14141 B1AMS2 SEPT6 Septin-6 1 TAAELLQSQGSQAGGS(0.146)QT(0.854)LKR 181.62 1.7390999999999998e-44 11847000.0 2985.7 3141.9 3507.2 3519.6 4337.4 3404.9 3835.6 3554.9 4267.0 4255.2 4943.3 True False 3288.806066043829 3406.6789394990087 3745.219682506879 3736.997698408443 4032.7559872176803 3377.171623290999 3981.5658569208567 3483.9947307349003 4087.672828892207 3986.5259458030237 4335.305438160537 0.7586100017532477 0.7857990603182177 0.8638883086622773 0.8619917908238652 0.9302126562341527 0.778992777201859 0.9184049229551468 0.8036330497195956 0.9428800086174781 0.9195490381629259 1.0 12.081917924844213 -2.0000000000062004 0.04601800927326008 1.3493994046088582 0.01660527454590733 0.4104603519667186 0.058069340539221664 199.8063939188937 0.6775431912575991 4.846445050899078 19.359229705382752 0.00999999999985723 2.0000000000062004 -1.3327941300629509 TAAESFK ddPTM_A549_MK2206_60min_R1 1 TAAESFK 7 0 H7BZ94;P07237;H0Y3Z3;I3L398;I3L4M2 H7BZ94 P4HB Protein disulfide-isomerase 0 124.83 0.016841 2892700.0 3391.7 3521.6 3981.3 3143.6 4256.4 2824.5 3273.7 3373.4 4751.9 5418.8 5007.6 False True 3964.1360408963924 3700.8343980302357 4545.90820635943 3913.7821411215677 3630.289198418985 3123.386715248642 3868.488914540828 3851.5897806042194 3675.602237225007 4194.689316479952 3764.0747172708507 1.0531501998904518 0.9831989734554293 1.20770934368047 1.0397727024821821 0.9644572627004421 0.8297887129916643 1.0277396717952727 1.0232500866499328 0.9764955568921355 1.1144011826421234 1.0 11.878079550657935 -6.573642627971817 5.906725920224018 0.9810665111262632 1.0797404191255016 0.19036419299729757 0.08076291597242072 0.18204288364080845 14.165206552003381 0.009773801673367048 0.020694697855652668 2.6690540710121923e-07 6.573642627971817 0.09867390799923836 TAAESFK ddPTM_A549_PD325901_60min_R1 2 TAAESFK 7 0 H7BZ94;P07237;H0Y3Z3;I3L398;I3L4M2 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 86.794 0.035987 8867300.0 7212.200000000001 7794.099999999999 8127.099999999999 8028.799999999999 9691.9 7482.1 8438.599999999999 8871.3 9700.5 11183.9 10519.1 False True 7944.377234658981 8450.936160396333 8678.653878222416 8524.72074127222 9011.174379239872 7421.1682582823505 8759.735540779098 8694.354962099782 9292.82171939744 10477.746645343692 9225.317386068915 0.8611494761855812 0.9160591236847885 0.9407431218928022 0.9240571770620423 0.9767874645535319 0.8044350072431116 0.949532159620558 0.9424450778494694 1.0073172911568835 1.1357600185296672 1.0 13.17138283089539 -8.531082926454543 2.1259616581125735 1.0037837657355833 0.9104230281298614 0.4702718806776853 0.0589063515418036 0.1880961951793322 1.6808807289066239 0.007346456742883157 0.008600428193914348 2.9438594642413805e-09 8.531082926454543 -0.09336073760572183 TAAILHGGS(ph)PDFVGNGK ddPTM_A549_MK2206_60min_R1 2 TAAILHGGSPDFVGNGK 17 0 H0YME5;Q9P2K8-2;Q9P2K8;Q9P2K8-3 H0YME5 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 1 TAAILHGGS(1)PDFVGNGK;TAAILHGGS(1)PDFVGNGK 119.38 3.1658e-10 16149000.0 3143.7 3892.8 3632.6 3447.0 4980.7 3718.4 3111.4 3753.4 5720.2 5682.0 5527.9 True False 3674.2797039142556 4090.926892506847 4147.757302996829 4291.515154741709 4248.0456278933925 4111.878619925847 3676.7011053860574 4285.455944305413 4424.583833282373 4398.432253679614 4155.16986772137 0.8842670265919051 0.9845390255369384 0.9982160621682102 1.032813408683845 1.0223518563930467 0.9895813530676993 0.8848497708716546 1.0313551745732816 1.0648382555076492 1.0585445105019606 1.0 12.020691741756348 TAAILHGGS(ph)PDFVGNGK ddPTM_A549_PD325901_60min_R1 2 TAAILHGGSPDFVGNGK 17 0 H0YME5;Q9P2K8-2;Q9P2K8;Q9P2K8-3 H0YME5 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 1 TAAILHGGS(1)PDFVGNGK;TAAILHGGS(1)PDFVGNGK 179.87 2.4734999999999996e-31 28453000.0 7465.1 7403.700000000001 8261.8 8357.3 10402.8 10134.900000000001 9707.2 9346.0 10627.4 9341.3 9941.4 True False 8222.951456483837 8027.635782287409 8822.495430239322 8873.511440194583 9672.143215711732 10052.364734615388 10076.61280798366 9159.586698204834 10180.767335779015 8751.488723803766 8718.670823726889 0.943142782051823 0.9207407808586023 1.0119083067375232 1.0177596585073854 1.109359833770771 1.1529698663767647 1.1557510326644382 1.0505714556028474 1.1676971801794827 1.0037640944061756 1.0 13.089892495102287 -6.202062057971174 1.5702248503560587 1.0912948885543061 0.9316148581760021 0.5288350135805255 0.056448972357818 0.29116738551548005 1.3285144462217948 0.010044399597635227 0.040607165083581476 6.279686196050893e-07 6.202062057971174 -0.15968003037830403 TAAKGEAAAERPGEAAVASS(ph)PSK ddPTM_A549_MK2206_60min_R1 4 TAAKGEAAAERPGEAAVASSPSK 23 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 TAAKGEAAAERPGEAAVAS(0.174)S(0.824)PS(0.002)K;TAAKGEAAAERPGEAAVAS(0.038)S(0.941)PS(0.021)K;TAAKGEAAAERPGEAAVAS(0.216)S(0.782)PS(0.003)K;TAAKGEAAAERPGEAAVAS(0.466)S(0.529)PS(0.005)K 114.2 8.453900000000001e-16 57196000.0 4950.9800000000005 6645.3 8119.2 6115.49 9922.0 6801.099999999999 6833.200000000001 6156.699999999999 11526.400000000001 10569.400000000001 12368.6 True False 5786.584384160515 6983.5173856287865 9270.624647495411 7613.785324534777 8462.486943593924 7520.787887795198 8074.703989626534 7029.431079102984 8915.688803878518 8181.765199232903 9297.135264005961 0.6224050978975629 0.7511472284011623 0.997148517714571 0.8189388567908326 0.9102252148956684 0.8089360511847207 0.8685152749027871 0.7560857059182049 0.9589716133738292 0.8800307801166198 1.0 13.182570530227887 -2.000000000342273 0.10441388102123651 1.0896906689221413 0.04487655880722894 0.23136295827237696 0.09672703511627016 70.08554703488383 0.4986599806671968 0.519290688984719 10.562711824155647 0.009999999992118876 2.000000000342273 -1.0448141101149124 TAAKGEAAAERPGEAAVASS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 TAAKGEAAAERPGEAAVASSPSK 23 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 TAAKGEAAAERPGEAAVAS(0.043)S(0.945)PS(0.012)K;TAAKGEAAAERPGEAAVAS(0.242)S(0.633)PS(0.125)K 142.32 1.0433e-27 88380000.0 8282.3 7889.9 8761.9 9687.2 9678.400000000001 12651.0 9444.2 12539.6 11177.7 12351.5 11572.8 True False 9123.112998892988 8554.809562606462 9356.535223584924 10285.556342772545 8998.622572667398 12547.974450425689 9803.60419906454 12289.48784087411 10707.940140498806 11571.624182079828 10149.418966023548 0.898880323044477 0.8428866313672496 0.9218789031083551 1.0134133172750808 0.8866145542706844 1.2363244134892457 0.965927629146391 1.210856294534171 1.0550298668667613 1.1401267620163569 1.0 13.309109517912594 -6.427032201744814 1.2554444896604486 1.0468746545402499 0.8697341630529027 0.4046199217775889 0.09746170653601867 0.39781370378667086 1.1672485106806787 0.013568452261360624 0.051784514707212334 3.740828500262723e-07 6.427032201744814 -0.17714049148734712 TAALESNLPGS(ph)PNTSR ddPTM_A549_MK2206_60min_R1 2 TAALESNLPGSPNTSR 16 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 TAALESNLPGS(0.999)PNT(0.001)SR;TAALESNLPGS(0.999)PNTSR 203.06 1.4347e-39 40429000.0 14555.4 14932.8 13299.0 12850.7 17474.8 13054.0 13292.599999999999 12900.8 21412.0 20987.0 21033.0 True False 17011.995674636117 15692.815736854252 15184.998175564277 15999.122076889855 14904.280068727589 14435.365615456101 15707.693357798644 14729.527907043032 16562.21618793786 16246.022123895471 15809.925618731078 1.0760326193110525 0.9925926354936118 0.9604724615259158 1.0119669416998789 0.9427166470074653 0.9130571492603075 0.993533665913563 0.9316633273462066 1.0475834350741973 1.0275837164374588 1.0 13.948542959785883 -8.776749382814346 24.994510519019087 1.0224699535410904 0.976014855138327 0.19227880427987187 0.04298059705621263 292.77634690531323 477973.5754129556 0.0076405100136497425 0.00814856173927323 1.6720552245153254e-09 8.776749382814346 -0.046455098402763406 TAALESNLPGS(ph)PNTSR ddPTM_A549_PD325901_60min_R1 2 TAALESNLPGSPNTSR 16 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 TAALESNLPGS(1)PNTSR;TAALESNLPGS(1)PNTSR 242.1 1.8742999999999995e-65 93216000.0 16412.8 17517.0 15655.099999999999 17826.6 17938.0 16441.199999999997 14883.3 17741.4 20002.0 19983.3 22350.0 True False 18079.01537353524 18993.21906591684 16717.54922776387 18927.70859485393 16678.096762740526 16307.30831826249 15449.69212595427 17387.53385914095 19161.385498828684 18721.551027628688 19601.091688323162 0.9223473702898569 0.9689878180219704 0.8528886805688947 0.9656456332036658 0.8508759118083238 0.8319591876597946 0.7882056964795497 0.8870696660992162 0.9775672602074291 0.9551279757944076 1.0 14.258646387434316 -8.78293921666803 4.606336268946861 0.9901190894417249 0.8817083803897463 0.3824445974101317 0.0527852877135839 0.13179627110788075 6.6306328876928085 0.009519611008153525 0.010301697431397248 1.6483930824895394e-09 8.78293921666803 -0.10841070905197858 TAANKS(ph)PCETISSPSSTLESK ddPTM_A549_MK2206_60min_R1 2 TAANKSPCETISSPSSTLESK 21 1 Q9C0D5 Q9C0D5 TANC1 Protein TANC1 1 T(0.015)AANKS(0.562)PCET(0.423)IS(0.001)SPSSTLESK;T(0.013)AANKS(0.941)PCET(0.046)ISSPSSTLESK 155.95 5.857e-28 24802000.0 5682.4 6420.9 6325.1 5759.5 7958.299999999999 6575.5 6250.6 5948.0 8881.6 8421.7 8523.5 True False 6641.45019865839 6747.696384118682 7222.094289815901 7170.577758553779 6787.644612296261 7271.315045536355 7386.253110923082 6791.147214986042 6869.931781000784 6519.232120875332 6406.8797133673015 1.0366122817635675 1.0531954221085658 1.127240499731521 1.119199685237277 1.0594306301918752 1.1349229844858015 1.1528627727335692 1.0599773241905892 1.0722741940460303 1.0175362130295063 1.0 12.645406189389714 -9.986002946282307 0.6813864363131709 1.0030046873546576 1.0953809309871632 0.43575501205262435 0.03629509418479915 0.4554097259786068 0.42458592321054783 0.020319489599639518 0.008283604976207498 1.032754399463914e-10 9.986002946282307 0.09237624363250552 TAANKS(ph)PCETISSPSSTLESK ddPTM_A549_PD325901_60min_R1 4 TAANKSPCETISSPSSTLESK 21 1 Q9C0D5 Q9C0D5 TANC1 Protein TANC1 1 T(0.003)AANKS(0.616)PCET(0.38)IS(0.002)SPSSTLESK;T(0.006)AANKS(0.902)PCET(0.091)IS(0.001)SPSSTLESK;T(0.173)AANKS(0.654)PCET(0.173)ISSPSSTLESK;T(0.002)AANKS(0.985)PCET(0.013)ISSPSSTLESK 167.72 1.7250999999999997e-35 39619900.0 13545.0 13833.8 16205.1 14793.1 15170.4 15745.2 14660.0 15333.2 12982.7 14966.9 18061.3 True False 14920.078428698023 14999.622875725323 17304.875535182553 15706.836189432299 14104.88343903884 15616.976311504428 15217.894322259815 15027.367297337292 12437.082267555392 14021.887379732862 15839.874600013924 0.9419316001835588 0.9469533853324911 1.0924881649736886 0.9916010439513513 0.8904668625991801 0.9859280269485656 0.9607332574619271 0.9487049409674041 0.7851755510453636 0.8852271709095814 1.0 13.95127329358729 -8.535973337938534 24.96241130131321 0.8968911813297427 0.9731136815158882 0.23386702390517233 0.06511847375538832 343.9921708071954 655754.5487850736 0.014851030848255951 0.01684376421000092 2.9108958173229072e-09 8.535973337938534 0.07622250018614551 TAAPAAPT(ph)MASPR ddPTM_A549_MK2206_60min_R1 1 TAAPAAPTMASPR 13 0 C9J7S4;C9JVL3 C9J7S4 PLEKHG2 1 TAAPAAPT(0.5)MAS(0.5)PR 49.368 0.014413999999999998 2928000.0 1289.8 1502.7 1379.1 1898.5 1754.4 1344.0 967.79 1140.0 1865.3 1849.4 2379.8 True False 1507.4867074175684 1579.1810114493514 1574.677117371283 2363.6325852269033 1496.330084039627 1486.2211879250033 1143.6249157233299 1301.5984911035794 1442.8125282720196 1431.6192555359164 1788.829980861325 0.8427221835200406 0.8828010645757249 0.8802832769009568 1.3213288073854899 0.8364853563775475 0.8308342345701211 0.639314483745779 0.7276256016666588 0.8065677251100759 0.8003104100740692 1.0 10.804800557784478 TAAPS(ph)PSLLYK ddPTM_A549_MK2206_60min_R1 2 TAAPSPSLLYK 11 0 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 T(0.011)AAPS(0.948)PS(0.041)LLYK;T(0.019)AAPS(0.838)PS(0.143)LLYK 134.18 5.8997999999999997e-08 21164000.0 5655.4 5910.700000000001 6644.799999999999 5115.6 7362.700000000001 6084.0 5801.9 5784.7 8418.4 8183.099999999999 8395.0 True False 6609.893258745008 6211.529383359079 7587.132557108773 6368.922229648012 6279.656583309713 6727.804841767655 6856.030128989963 6604.698939900767 6511.645841422379 6334.532026590225 6310.289809786884 1.0474785561343722 0.9843493041675149 1.2023429645563317 1.0092915573814365 0.9951455119494416 1.0661641611662953 1.0864841925891688 1.0466554055341915 1.0319091575355548 1.003841696266587 1.0 12.623490549385139 -9.500796639726458 0.753239751286829 1.0041735963476663 1.0555713526212318 0.11500684064489497 0.05545411424866209 0.8975528016897134 1.099765562741723 0.019216668056742926 0.012274857152328988 3.1564823139049626e-10 9.500796639726458 0.051397756273565465 TAAPS(ph)PSLLYK ddPTM_A549_PD325901_60min_R1 2 TAAPSPSLLYK 11 0 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 T(0.001)AAPS(0.857)PS(0.143)LLYK;TAAPS(0.5)PS(0.5)LLYK 127.17 1.2382e-07 35721000.0 7057.0 7043.4 7848.1 7948.4 8147.7 8202.6 8331.2 8323.3 8258.1 9265.5 8570.8 True False 7773.421444911181 7636.972036814452 8380.719260459131 8439.35461587387 7575.433660039074 8135.800745163358 8648.24837500757 8157.285251997468 7911.040775316325 8680.474748739876 7516.645934777644 1.0341609159672536 1.0160079512964804 1.114954639766074 1.1227553737534828 1.0078210049763598 1.082371155400714 1.1505461944128943 1.085229412530361 1.0524695248333988 1.1548335286856453 1.0 12.875873333173509 -9.7588242924088 0.9505108953587662 1.007956009394371 1.0763914331799491 0.0 0.061307389861131725 0.45424967071213856 0.84982942414343 0.01466342657952852 0.00887132494282816 1.7425117191172943e-10 9.7588242924088 0.06843542378557821 TAAQVLIR ddPTM_A549_MK2206_60min_R1 2 TAAQVLIR 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 131.03 0.0029688 65464000.0 7706.5 8096.1 7682.0 7123.5 9793.3 8435.7 7450.6 8049.700000000001 10708.0 9534.7 9541.5 False True 9007.168794164587 8508.156908760959 8771.42311336829 8868.757819786073 8352.71854310606 9328.360174835536 8804.277577871488 9190.769626172347 8282.655097162266 7380.804647863261 7172.082217996611 1.255865245320706 1.186288256346503 1.222995337582511 1.2365666692347814 1.1646155592230842 1.3006488062041823 1.2275762198848301 1.2814646216841084 1.1548466464005307 1.029102068760856 1.0 12.808176311465154 -9.785567920982787 0.7431217266069525 1.0134691989139903 1.2324471080308517 0.7959220015454064 0.04163065038300407 0.17959168752638155 0.2078740963475607 0.018073364709418015 0.009282901544980335 1.6384457984121e-10 9.785567920982787 0.21897790911686132 TAAQVLIR ddPTM_A549_PD325901_60min_R1 3 TAAQVLIR 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ;; 131.03 0.0029688 83528400.0 9324.5 9897.3 9947.8 9472.8 11356.3 10112.2 9992.400000000001 10617.7 11861.4 11260.7 11451.900000000001 False True 10271.116375665904 10731.380205577365 10622.917528980937 10057.91334171027 10558.672665108155 10029.849595889222 10372.666250051092 10405.921644075492 11362.906607129602 10549.69748023692 10043.38889957531 1.0226743660299986 1.0685019083579594 1.0577024981508119 1.0014461694434211 1.0513057664783483 0.9986519188073399 1.032785482447036 1.036096655035982 1.131381719930221 1.0504121254015186 1.0 13.293958533664417 -8.565527159114659 24.998589290651122 1.063183349009038 1.033774593259027 0.10562542542416997 0.03476551748567713 304.7988722370948 178657.92325495495 0.008388286428169753 0.009511427237314575 2.719398420012504e-09 8.565527159114659 -0.029408755750011117 TADAPSEPAAS(ph)PHQR ddPTM_A549_MK2206_60min_R1 3 TADAPSEPAASPHQR 15 0 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 TADAPS(0.032)EPAAS(0.968)PHQR;TADAPSEPAAS(1)PHQR;TADAPSEPAAS(1)PHQR 100.27 2.3494999999999997e-06 39590300.0 2308.37 2876.2799999999997 2406.46 2305.69 3562.12 2402.3100000000004 2351.75 2507.05 3529.05 3686.38 4144.92 True False 2697.966421771972 3022.670366414812 2747.732213667828 2870.584153506359 3038.13686671183 2656.5208496756823 2779.0325334549257 2862.4320150186186 2729.7258097348267 2853.6241976979 3115.6219700276156 0.8659479383976928 0.9701659557844305 0.8819209262552072 0.9213518780909468 0.9751301332250206 0.8526454349184526 0.8919671770803097 0.9187353416285119 0.8761415332138743 0.9159083563891439 1.0 11.605304481138775 -10.883315401700754 1.0877913258477534 1.0009433169107842 0.9057203534942353 0.06650859760173655 0.04452959517257631 0.36109841560561917 0.7462567074690095 0.026506641855492143 0.006118667996862067 1.308231488858758e-11 10.883315401700754 -0.0952229634165489 TADAPSEPAAS(ph)PHQR ddPTM_A549_PD325901_60min_R1 4 TADAPSEPAASPHQR 15 0 Q5VUB5 Q5VUB5 FAM171A1 Protein FAM171A1 1 TADAPS(0.105)EPAAS(0.895)PHQR;TADAPSEPAAS(1)PHQR;TADAPS(0.002)EPAAS(0.998)PHQR;TADAPS(0.001)EPAAS(0.999)PHQR 97.713 3.4301e-06 26600000.0 1866.0100000000002 1879.97 1707.13 2005.27 1892.8600000000001 2252.12 2031.97 2172.34 1733.3600000000001 2180.17 2540.91 True False 2055.4459615160436 2038.4016696552878 1822.98610760663 2129.130973601403 1759.9120436125 2233.7794814080057 2109.2977302866493 2129.0109745322384 1660.5129071217714 2042.5136941298606 2228.3941781555795 0.9223888581585312 0.9147401701356325 0.8180716524378546 0.9554552755848897 0.7897669365969903 1.002416674439925 0.9465550354437269 0.9554014255657409 0.7451612122304869 0.9165854560885766 1.0 11.12178873662676 -5.548095417825701 24.960490508151533 0.8902953267163611 0.9204769496946648 0.0 0.08165172361206818 996.2859390068946 986163.9253842538 0.013893372760545508 0.05381319316348537 2.8307699856134644e-06 5.548095417825701 0.030181622978303624 TADGGEPAGAS(ph)SPAGR ddPTM_A549_MK2206_60min_R1 1 TADGGEPAGASSPAGR 16 0 O76081-6 O76081-6 1 TADGGEPAGAS(0.654)S(0.346)PAGR 111.83 3.5460999999999997e-07 8781900.0 589.65 486.59 504.19 372.44 823.82 403.03 420.65 354.9 849.35 856.63 1082.1 True False 689.1685044415947 511.35535260606935 575.691723448211 463.6878167194668 702.6371693077551 445.6783670903379 497.0766600182057 405.2081618356665 656.9735811332442 663.1166880446266 813.3847055593075 0.8472848084446116 0.6286758886798175 0.707772988001229 0.570071964164388 0.8638435964007966 0.5479305967326693 0.6111212279021168 0.49817529032222624 0.8077033864086364 0.8152559096727149 1.0 9.66779405318211 -9.432232171030302 1.2512669278863213 0.9532413198093652 0.6616116173400219 0.3517959998197544 0.12225790170453697 0.21184115157743943 0.6868624481732989 0.028110887686224394 0.022331411684064148 3.69630524856722e-10 9.432232171030302 -0.2916297024693433 TADGGEPAGAS(ph)SPAGR ddPTM_A549_PD325901_60min_R1 1 TADGGEPAGASSPAGR 16 0 O76081-6 O76081-6 1 TADGGEPAGAS(0.633)S(0.367)PAGR 113.35 2.2851999999999996e-07 13710000.0 991.26 837.53 798.36 1015.7 977.08 820.75 639.88 977.82 1032.2 1047.6 1177.1 True False 1091.8919854729565 908.1115924117902 852.5415105286821 1078.4374821779334 908.4532715430101 814.0660841187956 664.2309835557717 958.3166130150495 988.8202235721909 981.4543572154652 1032.3241622516873 1.0577026339200866 0.8796767775259984 0.8258467075585382 1.0446694183982523 0.8800077579909665 0.7885760247470804 0.6434325649289877 0.9283097771583552 0.9578582578319136 0.95072303168293 1.0 10.011680350228177 -8.62646495413436 4.3232904113062425 0.9799385839445757 0.8708938753206146 0.1255036307046975 0.10802350813349863 0.2944612563144704 9.911348533225773 0.01883398517799165 0.02137159392260119 2.363388107633426e-09 8.62646495413436 -0.1090447086239611 TADGGEPAGASS(ph)PAGR ddPTM_A549_MK2206_60min_R1 1 TADGGEPAGASSPAGR 16 0 O76081-6 O76081-6 1 TADGGEPAGAS(0.115)S(0.885)PAGR 133.47 3.2226e-10 9589100.0 469.89 470.23 608.21 381.81 486.58 530.96 448.75 709.24 959.33 739.59 923.81 True False 549.19594429248 494.16269848527924 694.4633235852282 475.3534671401021 415.00472656862854 587.1458347772771 530.2820662859136 809.7769419564049 742.0432867352148 572.5161053324373 694.4024811410621 0.7908899510123084 0.7116372880368412 1.0000876184141307 0.6845503581136225 0.5976429201213118 0.8455410957237107 0.7636523207902985 1.1661492635017032 1.0686069057758376 0.8244730122387558 1.0 9.439628292400883 -8.245110712941054 24.201913348015957 1.0433343004615108 0.7700562813652941 0.4737641335740541 0.12248866224595642 266.64000370725284 395206.8910228301 0.01654335466752588 0.02132060046058839 5.6870793394250554e-09 8.245110712941054 -0.27327801909621663 TADGGEPAGASS(ph)PAGR ddPTM_A549_PD325901_60min_R1 1 TADGGEPAGASSPAGR 16 0 O76081-6 O76081-6 1 TADGGEPAGAS(0.251)S(0.749)PAGR 139.66 4.080599999999999e-11 13153000.0 939.96 930.84 1037.9 935.87 1024.8 722.14 874.03 642.28 912.42 1006.4 859.9 True False 1035.3840472380207 1009.2851535832646 1108.3381353997177 993.6765643850183 952.8215833680728 716.2591312647542 907.2916899375682 629.4692215410871 874.0741604260197 942.8557322467013 754.1377513552164 1.372937563962808 1.3383299692523518 1.4696759755203723 1.3176327038387097 1.2634582762311173 0.9497722796367204 1.203084832057708 0.8346873239138408 1.1590378002629793 1.2502433813349763 1.0 9.558684261074454 -7.002507395630656 2.8148693934176006 1.059670829231135 1.379951889839348 0.6065866381490314 0.11654168577792991 0.1184162308736888 1.9009636240379202 0.015079263514487184 0.029265961263099903 9.942431427738129e-08 7.002507395630656 0.32028106060821293 TADGIVSHLK ddPTM_A549_PD325901_60min_R1 1 TADGIVSHLK 10 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 86.898 0.00023793 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TADGRVS(ph)PAGGTLDDKPK ddPTM_A549_MK2206_60min_R1 6 TADGRVSPAGGTLDDKPK 18 2 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 TADGRVS(1)PAGGTLDDKPK;T(0.006)ADGRVS(0.991)PAGGT(0.003)LDDKPK;TADGRVS(0.991)PAGGT(0.008)LDDKPK;TADGRVS(1)PAGGTLDDKPK;T(0.009)ADGRVS(0.989)PAGGT(0.002)LDDKPK;T(0.032)ADGRVS(0.961)PAGGT(0.007)LDDKPK 152.34 3.4383999999999997e-18 346187200.0 35353.9 38768.00000000001 36957.4 33458.6 46186.9 36744.5 36048.100000000006 37401.1 50215.7 52548.9 55020.2 True False 41320.77400013175 40741.12560848374 42198.51504425892 41655.9585020136 39392.868193416485 40632.77860097494 42597.57315583567 42702.82046106497 38841.92412799509 40678.06699320392 41357.16585973031 0.9991200591519741 0.9851043890837207 1.020343492283349 1.0072246885411997 0.9525040552107447 0.9824846010673882 1.0299925604262248 1.0325373988609052 0.939182444457967 0.9835796565743972 1.0 15.335849703011569 -8.761743461135714 24.999999506104015 0.9712806009967441 1.0001862481806543 0.17648711805295092 0.02560676890421383 11.465208440724146 942634.3350788789 0.005301027383688653 0.005813615280222484 1.7308384680263419e-09 8.761743461135714 0.0289056471839102 TADGRVS(ph)PAGGTLDDKPK ddPTM_A549_PD325901_60min_R1 4 TADGRVSPAGGTLDDKPK 18 2 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 TADGRVS(1)PAGGTLDDKPK;T(0.001)ADGRVS(0.994)PAGGT(0.006)LDDKPK;TADGRVS(0.999)PAGGT(0.001)LDDKPK;T(0.001)ADGRVS(0.998)PAGGT(0.001)LDDKPK 158.94 2.2503e-23 624192000.0 38883.0 40251.7 41424.2 39417.4 47579.4 41161.6 44573.6 44079.7 45704.4 44297.3 48652.8 True False 42830.373535848295 43643.85202235345 44235.49531595048 41852.12327458944 44237.58708401919 40826.39357668499 46269.872739609826 43200.495803644306 43783.60300933235 41500.360918175495 42668.81403551006 1.0037863602256154 1.022851302734403 1.0367172445696893 0.9808597735985595 1.036766267916506 0.9568204436783323 1.0843955658365116 1.0124606643084049 1.0261265516518583 0.9726157582828022 1.0 15.380894391450878 TADGRVS(ph)PAGGTLDDKPKEQLQR ddPTM_A549_PD325901_60min_R1 1 TADGRVSPAGGTLDDKPKEQLQR 23 3 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 TADGRVS(0.998)PAGGT(0.002)LDDKPKEQLQR 115.77 1.0652999999999998e-15 31402000.0 4918.5 5209.4 5303.9 7243.3 7144.6 7966.1 6752.5 7295.5 8289.1 7569.4 8081.5 True False 5417.822499191675 5648.414420390887 5663.854548941672 7690.702190272149 6642.787943531942 7901.226722752036 7009.470082609777 7149.985529290963 7940.737953121723 7091.4667921981145 7087.526732849384 0.7644165169890738 0.7969514096097197 0.7991299027756392 1.08510379997964 0.9372504956833306 1.1148073256826394 0.9889867575556607 1.0088124953592195 1.1203820814273422 1.0005559145661447 1.0 12.791066556307994 -6.254321920511703 23.65262454439254 1.0468145933667508 0.7878444310497954 0.7948752318703826 0.055090339540760556 86.67856525390107 288046.16584562627 0.008229229912375059 0.021252818427455192 5.567728883810095e-07 6.254321920511703 -0.25897016231695535 TADGRVSPAGGT(ph)LDDKPKEQLQR ddPTM_A549_PD325901_60min_R1 1 TADGRVSPAGGTLDDKPKEQLQR 23 3 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 TADGRVS(0.348)PAGGT(0.652)LDDKPKEQLQR 82.62 1.7969e-05 25149000.0 5861.7 6274.0 7016.8 7706.5 8164.1 9661.8 7064.4 9139.3 9562.4 8029.9 8047.8 True False 6456.775468844533 6802.7319986049115 7493.0022434461325 8182.513002268624 7590.681780616005 9583.117504159583 7333.239607788008 8957.009491857847 9160.525582141754 7522.890743608689 7057.971619207481 0.9148202652548417 0.963836689296403 1.061636777208733 1.1593292582816328 1.0754763819053639 1.3577721789189687 1.0390010053074477 1.2690628377538875 1.2978977638862144 1.065871492474691 1.0 12.785037913573866 -5.855310172310348 1.5292758291398931 1.158608247588241 0.9063103183408667 0.3882947709631954 0.10716215785981809 0.4567361681734758 1.8207193351966084 0.018550543286364303 0.1236626337929601 1.3953714334167252e-06 5.855310172310348 -0.2522979292473744 TADLGS(ph)PCKEPHK ddPTM_A549_MK2206_60min_R1 2 TADLGSPCKEPHK 13 1 A0A0A0MS79;O14513 A0A0A0MS79 NCKAP5 Nck-associated protein 5 1 T(0.001)ADLGS(0.999)PCKEPHK;TADLGS(1)PCKEPHK 96.163 7.0523e-05 11671500.0 2392.0 3024.4 2055.1 2283.71 3936.4 2816.6 2198.82 2502.9 4181.8 4136.9 3820.7 True False 2795.711121214779 3178.3290417431435 2346.5440823071017 2843.219052519636 3357.3607745175486 3114.650742492236 2598.3171320129113 2857.6937398097784 3234.62897696238 3202.371416798169 2871.9147440443976 0.9734659174727783 1.1066933822928307 0.8170660661752659 0.9900081673440102 1.1690321871426856 1.0845206143222774 0.9047333794992152 0.9950482498604425 1.1262970057416075 1.1150649313107404 1.0 11.487797206465807 -6.540548349186545 24.988700755551204 1.0532720767056027 0.9671202766002269 0.16522133085326474 0.09237115311541047 345.84698942800514 489102.3497532514 0.013466281115737971 0.028036694191896017 2.8803923632689517e-07 6.540548349186545 -0.08615180010537582 TADS(ph)QETK ddPTM_A549_PD325901_60min_R1 1 TADSQETK 8 0 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 TADS(0.999)QETK 113.03 0.00013233 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TADS(ph)QETKESQK ddPTM_A549_MK2206_60min_R1 2 TADSQETKESQK 12 1 P25205;Q7Z6P5;J3KQ69;A0A499FHX9;P25205-2 P25205 MCM3 DNA replication licensing factor MCM3 1 T(0.027)ADS(0.97)QET(0.002)KES(0.002)QK;T(0.031)ADS(0.959)QET(0.008)KES(0.002)QK 45.33 0.014037 10731100.0 3707.8 4943.5 4309.6 3843.2000000000003 1485.5300000000002 806.24 912.12 1194.06 1631.5700000000002 6203.5 7472.0 True False 4333.585992993376 5195.103034604293 4920.766082969538 4784.784172527802 1267.0105048696914 891.5557816612016 1077.8403973274828 1363.3216616553855 1262.022000081906 4802.125041482138 5616.496183290953 0.771581756947645 0.924972236259983 0.8761273794877297 0.8519162154445169 0.22558735259876808 0.15873878527925925 0.1919061924290187 0.242735260056129 0.22469916454967334 0.8550037042254983 1.0 12.455454679270407 -6.672207897063752 10.855365627446407 0.5018812839146319 0.8637268330062159 0.35106827030828813 0.2729362182170394 0.5665224604975854 65.07056670023053 0.05239591903323409 0.10910202502212187 2.1271205481717815e-07 6.672207897063752 0.36184554909158395 TADSSS(ph)SEDEEEYVVEK ddPTM_A549_MK2206_60min_R1 1 TADSSSSEDEEEYVVEK 17 0 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 TADS(0.017)S(0.067)S(0.534)S(0.382)EDEEEYVVEK 148.57 1.5628e-16 37004000.0 1151.4 962.77 1348.3 1138.9 1758.8 1523.0 1431.0 816.58 1924.4 2341.1 1845.1 True False 1345.7281709726985 1011.7708806768433 1539.5092142351539 1417.9305511271637 1500.082849868272 1684.1628491144204 1690.994176835972 932.3327156713682 1488.5264726353266 1812.243884035436 1386.9107478305862 0.9703062529998375 0.7295140529118121 1.1100276038982777 1.0223661135693836 1.0816001334005885 1.214326770305009 1.2192523415663443 0.6722369965981794 1.0732676741914997 1.3066766458260983 1.0 10.437659233242643 -5.771081683889086 24.99831709551402 1.041467174935774 0.8499101315844861 0.19253870622457814 0.1669382981438681 197.35087168620004 511650.50548272306 0.019292928855096737 0.06109686863016788 1.6940191524052293e-06 5.771081683889086 -0.19155704335128787 TADSSSS(ph)EDEEEYVVEK ddPTM_A549_MK2206_60min_R1 1 TADSSSSEDEEEYVVEK 17 0 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 TADSSS(0.012)S(0.988)EDEEEYVVEK 212.7 4.851600000000001e-55 38276000.0 1727.2 1481.8 2038.4 1936.7 2477.6 1761.9 1771.9 1802.3 3168.7 2544.2 2461.2 True False 2018.7091340142836 1557.2172907204688 2327.475771191085 2411.1915869417676 2113.148322056874 1948.3430885454356 2093.8312941548993 2057.781544312262 2450.994509374122 1969.4634529763591 1850.0161143356138 1.091184621783282 0.8417317442014303 1.2580840529742838 1.303335451111833 1.142232386886942 1.053149252835094 1.1317908411337516 1.112304659600904 1.3248503569139636 1.0645655665997493 1.0 10.853322121874392 -5.766233646544783 24.999996202776867 1.1598801480186567 0.9664581818306651 0.2944970756826454 0.11198780731896174 116.10960474377471 605476.5523354466 0.01856734081839001 0.060531503084813774 1.7130354618097128e-06 5.766233646544783 -0.19342196618799157 TADSSSS(ph)EDEEEYVVEK ddPTM_A549_PD325901_60min_R1 2 TADSSSSEDEEEYVVEK 17 0 P45973;F8VNY3 P45973 CBX5 Chromobox protein homolog 5 1 TADSSS(0.015)S(0.985)EDEEEYVVEK;TADSSS(0.229)S(0.77)EDEEEYVVEK 370.86 7.157099999999996e-273 113960000.0 8452.5 8428.4 8414.3 9065.6 11088.8 10108.099999999999 9721.7 9282.0 9581.0 11172.4 9406.2 True False 9310.591577598374 9138.690847472371 8985.344997296317 9625.561522528575 10309.960942283251 10025.782984929878 10091.664613418365 9096.863228411863 9178.343888824988 10466.972757306285 8249.29703081456 1.1286527255376353 1.1078144978093958 1.0892255380952234 1.1668341540585936 1.2497987287609178 1.2153499804261385 1.2233363128666352 1.102744051333258 1.1126213366472382 1.2688320857168536 1.0 13.010055469066833 -9.750782359630385 0.7022708537885857 1.0100277120796588 1.1637473661043019 0.0 0.09170868249089308 0.36216540184578655 0.3771604630769382 0.025110198867927737 0.012775624434809814 1.7750788129901168e-10 9.750782359630385 0.15371965402464305 TADSVS(ph)PLEPPTK ddPTM_A549_PD325901_60min_R1 2 TADSVSPLEPPTK 13 0 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 TADS(0.02)VS(0.98)PLEPPTK;TADS(0.002)VS(0.998)PLEPPTK 147.73 1.3341e-12 10973500.0 8627.5 9039.1 8955.3 7992.7 9729.099999999999 8942.099999999999 9384.0 9611.4 10321.2 11025.900000000001 12088.7 True False 9503.35744877018 9800.856679724211 9563.060510593601 8486.390926261269 9045.7615795729 8869.278502343808 9741.113255121838 9419.693087002566 9887.435856939825 10329.722792308132 10601.8665365831 0.8963853125275277 0.9244463364922675 0.9020166852313255 0.800461965539548 0.8532234911993412 0.8365770755309195 0.9188111566495274 0.8884938378066454 0.9326127453898763 0.9743305819464996 1.0 13.3720306637729 -9.285114633980259 0.679269983348138 0.9906559328055907 0.8712847547582926 0.5986017461893497 0.03508838619547548 0.29328830845740345 0.2982093189522545 0.013301815360668528 0.009438085963211025 5.186631173984713e-10 9.285114633980259 -0.11937117804729813 TADSVS(ph)PLEPPTKDK ddPTM_A549_MK2206_60min_R1 4 TADSVSPLEPPTKDK 15 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 T(0.008)ADS(0.156)VS(0.836)PLEPPTKDK;TADS(0.003)VS(0.997)PLEPPTKDK;T(0.001)ADS(0.023)VS(0.976)PLEPPTKDK;T(0.001)ADS(0.015)VS(0.984)PLEPPTKDK 114.56 3.0635000000000004e-07 39283100.0 11903.599999999999 13352.0 12095.8 12584.3 16594.8 11899.800000000001 10878.199999999999 11366.400000000001 18884.5 17649.9 16626.899999999998 True False 13912.636664921512 14031.559768996967 13811.16632318147 15667.454064930702 14153.726902998636 13159.028937552057 12854.628130298455 12977.6220081401 14607.190902349734 13662.775331612089 12497.98185090476 1.113190659971581 1.1227060445748036 1.105071721814162 1.2535987211244426 1.1324809934792803 1.0528923064966238 1.0285363095936866 1.0383774086854365 1.1687639713840905 1.0931985255381858 1.0 13.609407529736302 -7.159221455675861 5.595175113073914 1.072258555273951 1.1490866501991583 0.3493946359582486 0.055058792933096005 0.2921342164259538 13.259863661993275 0.010588984810223566 0.018506969869813997 6.930723040931096e-08 7.159221455675861 0.07682809492520737 TADSVS(ph)PLEPPTKDK ddPTM_A549_PD325901_60min_R1 2 TADSVSPLEPPTKDK 15 1 Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-6 SYNRG Synergin gamma 1 TADS(0.009)VS(0.99)PLEPPTKDK;TADS(0.003)VS(0.997)PLEPPTKDK 114.99 2.9599e-07 42953000.0 11944.3 11583.6 12372.2 12405.900000000001 14133.0 12487.5 13276.2 14598.099999999999 16318.4 18254.2 20417.3 True False 13156.876543071068 12559.790624647743 13211.851892082474 13172.184267156857 13140.346836203122 12385.805940217428 13781.433056015392 14306.929443512097 15632.594396764614 17101.626696718748 17906.10153592845 0.7347705762011848 0.701425187355641 0.7378407782159058 0.7356254649135645 0.7338474435564392 0.6917086846271594 0.7696501121901412 0.7989974487079367 0.873031707398617 0.9550725858671397 1.0 14.128163651714686 -9.070557155190487 0.5877429917626371 0.9862332438681719 0.7149783919578028 0.9461719422444761 0.022985308437033405 0.09824462856312882 0.07685867467929935 0.00923052953311727 0.007264054200862899 8.500468156784706e-10 9.070557155190487 -0.27125485191036913 TAEISSTALRS(ph)SPIMR ddPTM_A549_PD325901_60min_R1 2 TAEISSTALRSSPIMR 16 1 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 TAEISSTALRS(0.912)S(0.088)PIMR;TAEIS(0.01)S(0.05)T(0.05)ALRS(0.445)S(0.445)PIMR 178.06 4.3747e-29 49909000.0 7172.0 6833.6 7244.9 7939.7 9001.1 10266.599999999999 8339.4 9393.599999999999 10221.7 8558.5 9207.1 True False 7900.096160252657 7409.491454521282 7736.5824811228595 8430.117236633 8368.893788109246 10182.992213480376 8656.760430494784 9206.23727886336 9792.117495919254 8018.114849397251 8074.685068615678 0.9783782392899005 0.9176198689556525 0.9581280774891221 1.0440180842964142 1.0364359373763177 1.2611008512343314 1.0720864475744682 1.140135770080464 1.2126934255279893 0.9929941268621979 1.0 12.979190277124177 -6.550567775234564 1.83186563688092 1.1133256758146735 0.9461630633387496 0.4188633213422013 0.07839890657364312 0.2818368503184945 1.874098026243794 0.013300443046067721 0.03627491702813448 2.8147007236021515e-07 6.550567775234564 -0.1671626124759239 TAEISSTALRSS(ph)PIMR ddPTM_A549_MK2206_60min_R1 2 TAEISSTALRSSPIMR 16 1 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 TAEISSTALRS(0.102)S(0.898)PIMR;TAEISS(0.002)T(0.011)ALRS(0.126)S(0.861)PIMR 113.86 5.5403e-08 29241000.0 3304.0 3067.5 3034.3999999999996 2967.4 3851.0 3014.8999999999996 2859.3 3042.5 4626.0 4799.1 4604.1 True False 3861.6344249555336 3223.6226476481565 3464.7235479308406 3694.4131332116467 3284.523001388851 3333.93471687135 3378.797798621313 3473.7836922654724 3578.2183862040233 3714.9799768802955 3460.7749033043197 1.115829411866249 0.9314742327131036 1.0011409712381902 1.0675103803151864 0.9490715499158339 0.9633491949124273 0.9763125002424354 1.0037589237452953 1.0339356029158584 1.0734532238237346 1.0 11.756879393039918 -11.633037873679536 3.3922693406353392 0.9997199425755285 1.008677560245661 0.0 0.05530322730346578 2.4717425105256523 52.4556229793343 0.04506564810381935 0.006742722926333288 2.327888239801959e-12 11.633037873679536 0.008957617670132478 TAEISSTALRSS(ph)PIMR ddPTM_A549_PD325901_60min_R1 3 TAEISSTALRSSPIMR 16 1 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 TAEISS(0.001)T(0.004)ALRS(0.41)S(0.584)PIMR;TAEISS(0.001)T(0.001)ALRS(0.213)S(0.786)PIMR;TAEIS(0.001)S(0.005)T(0.001)ALRS(0.121)S(0.872)PIMR 88.335 3.4843000000000003e-06 69854000.0 8792.2 8218.4 9594.599999999999 10102.7 10595.8 11656.0 10080.4 11211.099999999999 11793.7 11208.900000000001 11140.3 True False 9684.777671524449 8910.993410477307 10245.747253016802 10726.72083410358 9851.587561525585 11561.077400534483 10464.015138206534 10987.485815562195 11298.051802696516 10501.16814107716 9770.113724180159 0.991265602933105 0.9120664981026162 1.0486824966693573 1.0979115634607102 1.008339087921135 1.1833104226741853 1.0710228594687727 1.1246016295971202 1.1563889757736234 1.0748255790603243 1.0 13.25415963993209 -5.905620408903539 5.01011042550249 1.082895832158469 0.9529999394798205 0.4742108224638928 0.05507020622595981 0.16215051074327747 6.7150154641259165 0.009265620928514916 0.030252320305845348 1.2427380367855255e-06 5.905620408903539 -0.12989589267864843 TAELPPLK ddPTM_A549_MK2206_60min_R1 1 TAELPPLK 8 0 F2Z3J9;Q14914-2;Q14914;F6XGT7;Q5JVP2 F2Z3J9 PTGR1 Prostaglandin reductase 1 0 57.281000000000006 0.04715 1388800.0 1361.3 2092.3 2325.7 1705.5 2889.1 1645.0 2016.2 1999.5 3117.3 2346.0 2553.0 False True 1591.054159410401 2198.789133064137 2655.5192312888066 2123.347576562805 2464.1172171676267 1819.0728081373736 2382.517441884479 2282.935248211934 2411.2365273051873 1816.0369706322392 1919.019640784504 0.8290973815984348 1.1457877169851487 1.3837895010825518 1.1064751665046904 1.28405002470964 0.9479177646111681 1.2415284300636418 1.1896362078288367 1.2564939284933336 0.9463357914824858 1.0 10.906153761967865 -11.010720720481613 1.3121762548748594 1.0005702737213549 1.1707815357373061 0.1639138275373736 0.14958308394784206 0.6646166901502375 2.0488172554789976 0.09931307304244025 0.022860041896821125 9.756168209263145e-12 11.010720720481613 0.17021126201595127 TAENATS(ph)GETLEENEAGD ddPTM_A549_MK2206_60min_R1 2 TAENATSGETLEENEAGD 18 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 TAENAT(0.077)S(0.92)GET(0.003)LEENEAGD;TAENAT(0.012)S(0.988)GETLEENEAGD 146.78 7.2883e-17 6383600.0 158.69 0.0 305.66999999999996 193.91 531.28 176.2 172.27 614.5 495.19 481.72 342.89 True False 185.47299240199558 0.0 349.0186023253429 241.41795870495073 453.12941578236024 194.84536704790597 203.56922910100138 701.6072568273238 383.03025565593816 372.8991174309301 257.7409497174298 0.719610106990511 0.0 1.354144937806677 0.9366690041672674 1.7580808027561838 0.7559736520778773 0.7898210560804608 2.7221411948567726 1.4861055492961723 1.4467981042195743 1.0 8.009777959649321 -5.773059567322817 24.87696327162674 1.2943846879149215 0.35980507466751227 0.324279331395384 0.5506256375542282 160.9218954541555 344510.8913853768 0.07471120025203454 0.23511813062379144 1.6863217156132594e-06 5.773059567322817 -0.9345796132474091 TAENATS(ph)GETLEENEAGD ddPTM_A549_PD325901_60min_R1 2 TAENATSGETLEENEAGD 18 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 TAENAT(0.075)S(0.911)GET(0.014)LEENEAGD;TAENAT(0.082)S(0.918)GETLEENEAGD 174.52 1.7707e-30 10626300.0 358.73 584.7 282.75 522.17 433.51 569.5899999999999 649.53 646.84 478.41 734.48 789.96 True False 395.1480055169319 633.9747210048283 301.9391153138743 554.4232549658869 403.061753128311 564.9514478869627 674.248219586454 633.9382687638367 458.30409141558954 688.1048074528588 692.7999279690283 0.5703638086039134 0.915090627770923 0.43582440344504847 0.800264596723042 0.581786655650937 0.8154611816186835 0.9732221271486569 0.9150380119441597 0.6615244501527692 0.9932229777651198 1.0 9.436294969841194 -7.413566006307833 6.163058150611218 0.8536745883596464 0.6708320414372113 0.3610166910607103 0.14944490499278854 0.2823236015159064 13.842580231606302 0.0242709964419228 0.038896613790283925 3.858637615798747e-08 7.413566006307833 -0.18284254692243507 TAENATSGET(ph)LEENEAGD ddPTM_A549_MK2206_60min_R1 2 TAENATSGETLEENEAGD 18 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 TAENATS(0.006)GET(0.994)LEENEAGD;TAENATS(0.002)GET(0.998)LEENEAGD 105.6 5.487800000000001e-09 15110900.0 0.0 139.77 0.0 165.81 0.0 0.0 0.0 154.24 304.95000000000005 183.43 0.0 True False 0.0 146.88369599406133 0.0 206.4334574434938 0.0 0.0 0.0 176.10399234018942 235.8793119050835 141.9930356023323 0.0 0.0 TAENATSGET(ph)LEENEAGD ddPTM_A549_PD325901_60min_R1 1 TAENATSGETLEENEAGD 18 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 TAENAT(0.001)S(0.006)GET(0.993)LEENEAGD 73.464 0.00060705 9674400.0 219.62 0.0 0.0 234.85 154.11 170.79 273.06 244.85 0.0 123.78 219.18 True False 241.9156607243011 0.0 0.0 249.35615111695148 143.2858452506379 169.39914286524402 283.45144772416546 239.96627466889083 0.0 115.96450967557304 192.22224949649546 1.258520599763929 0.0 0.0 1.297228347759491 0.7454175862885749 0.8812670921756768 1.4746026980052236 1.2483792864637442 0.0 0.6032834907474499 1.0 7.586631525784725 -6.2379091431369185 24.76019462971139 0.7194706306845238 0.37755634060216076 0.07466578653670308 0.5118286524987127 1743.864626036986 1835015.897228463 0.08238672338358662 0.2178328296803595 5.782170010216571e-07 6.2379091431369185 -0.341914290082363 TAENFR ddPTM_A549_PD325901_60min_R1 2 TAENFR 6 0 P49792;A6NM32;R4GN99;H0Y548;P30405-2;P30405;Q08752;P62937;F8WE65;C9J5S7;P0DN26;F5H284;A0A0B4J2A2;Q9Y536;A0A0H2UH34;P0DN37;A0A075B759;A0A075B767;O43447;C9JQD4 P49792;Q08752;P62937 RANBP2;PPIH;PPIF;PPID;PPIA;PPIAL4D;PPIAL4C;PPIAL4A;PPIAL4E E3 SUMO-protein ligase RanBP2;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase F, mitochondrial;Peptidyl-prolyl cis-trans isomerase D;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase H 0 ; 136.89 0.02696 134898000.0 17662.0 17658.5 17574.0 17865.9 20819.8 19169.3 18766.5 20275.1 20739.1 21084.3 20994.3 False True 19455.03323792281 19146.643767511134 18766.677321046962 18969.436066597176 19357.48907241082 19013.191576361165 19480.669426922846 19870.69722499175 19867.507749162975 19753.03369973086 18412.134193832797 1.0566419423794626 1.039892690654208 1.0192559495537958 1.0302681843884807 1.0513441227739189 1.0326446340332287 1.058034295309881 1.07921748863027 1.0790442617900133 1.072826946174833 1.0 14.168369242109373 -5.258493719556467 21.336555288194294 1.0410239604648017 1.0566419769153617 0.0 0.024597796209703763 155.23758153784786 1123892.4024308084 0.004253251753136671 0.04024924153166854 5.514501769860728e-06 5.258493719556467 0.015618016450559935 TAESQT(ph)PTPSATSFFSGK ddPTM_A549_MK2206_60min_R1 2 TAESQTPTPSATSFFSGK 18 0 P55265-5;P55265;P55265-4;A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-3;P55265-2 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAES(0.002)QT(0.98)PT(0.018)PSATSFFSGK;TAES(0.095)QT(0.903)PT(0.003)PSATSFFSGK 182.17 1.3915e-39 22925000.0 6348.7 6653.9 5575.1 4431.5 6711.1 5083.2 4848.3 4168.3 6306.5 5699.9 6298.1 True False 7420.205349187408 6992.555088895218 6365.73301215042 5517.217698937595 5723.90608014041 5621.100850044928 5729.1733525882955 4759.169289883374 4878.087819411079 4412.2886312475275 4734.107951282757 1.567392511017165 1.4770586477649945 1.3446531168402183 1.1654186502955948 1.2090780647681378 1.187362203796352 1.2101906867239718 1.0052937826637067 1.0304133048105313 0.9320211276660835 1.0 12.208876888707705 -2.000000000001407 0.2482660513591779 0.9837386401291733 4.896531516012242 0.9216125582899418 0.0541995560916452 7.759260057952052 0.09403379033031194 0.02477901431473429 12.852723860976129 0.009999999999967606 2.000000000001407 3.912792875883069 TAESQT(ph)PTPSATSFFSGK ddPTM_A549_PD325901_60min_R1 1 TAESQTPTPSATSFFSGK 18 0 P55265-5;P55265;P55265-4;A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-3;P55265-2 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 T(0.001)AES(0.087)QT(0.908)PT(0.004)PSATSFFSGK 150.39 3.8599e-17 10621000.0 2018.1 1758.1 2073.8 1896.1 2510.3 2392.0 2302.7 2402.2 2677.6 3205.6 3201.1 True False 2222.9760263533008 1906.2612570524855 2214.54053877246 2013.2177906444617 2333.985188064863 2372.520345065072 2390.33050858579 2354.286236510557 2565.069783604821 3003.1978689288803 2807.384993444803 0.7918315555379517 0.6790166868824808 0.7888268064206994 0.7171149647609044 0.8313733932163487 0.8450997460643507 0.851443786358897 0.8386046951193997 0.9136865052688592 1.0697492064470306 1.0 11.455011207453481 -8.203093287275776 0.2953461324673122 1.0164475671913793 0.6986030134583276 0.8351120974608055 0.044028007290770124 0.36998309838599297 0.09340613482960773 0.028448231806974866 0.04184077433185152 6.264792812844489e-09 8.203093287275776 -0.31784455373305165 TAESQTPT(ph)PSATSFFSGK ddPTM_A549_MK2206_60min_R1 1 TAESQTPTPSATSFFSGK 18 0 P55265-5;P55265;P55265-4;A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-3;P55265-2 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 T(0.001)AES(0.005)QT(0.135)PT(0.739)PS(0.038)AT(0.038)S(0.038)FFS(0.007)GK 67.605 0.002559 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TAETRLT(ph)LQR ddPTM_A549_MK2206_60min_R1 2 TAETRLTLQR 10 1 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 TAET(0.001)RLT(0.999)LQR;TAET(0.015)RLT(0.985)LQR 79.46600000000001 0.0004982 10198300.0 1135.03 1208.64 1293.37 1126.18 1540.23 1192.56 1323.15 1149.4299999999998 1611.5500000000002 1775.54 1696.62 True False 1326.5953151807735 1270.1546134811629 1476.7893142589348 1402.094150556142 1313.6642073303442 1318.7559076427394 1563.5492278689856 1312.3652224817429 1246.5364981165349 1374.4442808339152 1275.3024296701153 1.040220173911161 0.9959634545742345 1.157991453557364 1.0994209043566427 1.0300805336583199 1.03407307706915 1.226022307723064 1.0290619636169083 0.977443835372429 1.0777398747600953 1.0 10.31662369805737 -8.51718622450231 24.769255760440643 0.9900802810855203 1.082997476674992 0.13407142127124927 0.06666799092857133 194.49708367926823 846296.5313531088 0.010076021327863673 0.011603447785012095 3.0395813804998606e-09 8.51718622450231 0.09291719558947165 TAFQEALDAAGDK ddPTM_A549_MK2206_60min_R1 2 TAFQEALDAAGDK 13 0 P10599;P10599-2 P10599 TXN Thioredoxin 0 ; 169.62 3.4598e-21 8376300.0 5515.8 6525.2 5457.4 5883.2 7848.2 6568.6 6062.6 7420.2 8166.7 7569.200000000001 8990.4 False True 6446.732191637323 6857.30480861736 6231.341382308782 7324.584264106884 6693.740176447676 7263.684892116207 7164.095944434501 8472.03607340945 6316.955489540076 5859.312462962295 6757.835557582842 0.9539640520556266 1.0147190990646267 0.9220913011588022 1.0838654184013259 0.990515397927485 1.074853750172385 1.0601169388319611 1.253661176159153 0.9347601662860733 0.8670398107553342 1.0 12.722345529637584 -4.455928523953404 16.364639329722223 1.0042219616870731 1.011587574476352 0.0 0.09995779614283433 0.0 0.0 0.012331423785826042 0.0 3.5000276563140326e-05 4.455928523953404 0.007365612789278941 TAFQEALDAAGDK ddPTM_A549_PD325901_60min_R1 2 TAFQEALDAAGDK 13 0 P10599;P10599-2 P10599 TXN Thioredoxin 0 ; 172.21 2.6645e-21 14862400.0 10106.3 8636.7 9815.7 8594.6 11690.900000000001 9170.0 8127.299999999999 9430.2 9661.2 9887.3 10134.3 False True 11132.28413613517 9364.545019501284 10481.852428599108 9125.46892224719 10869.771515415488 9095.322560303814 8436.588848929205 9242.107263151209 9255.173361728008 9263.014190622824 8887.845346620737 1.2525290103487 1.0536350098690448 1.1793468517748715 1.0267357909998738 1.2229928730193649 1.0233439270814901 0.9492276834156317 1.0398591450137198 1.041329253692171 1.0422114505114257 1.0 13.11761799792324 -7.371407558828755 8.597150940489232 1.0157998193335163 1.136844659186606 0.489829986035322 0.06625360588451401 0.20544565707744838 14.671598321844995 0.00885075183696953 0.014157997695091773 4.251992023807999e-08 7.371407558828755 0.12104483985308967 TAFSAMTQNPRPGS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 TAFSAMTQNPRPGSPLR 17 1 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 TAFSAMT(0.002)QNPRPGS(0.998)PLR 57.41 0.0017811 8113000.0 2135.9 2291.4 2370.3 2172.6 2585.8 2630.3 2137.3 2479.3 2474.2 2453.9 3019.5 True False 2352.7349956335256 2484.504319668999 2531.162811771799 2306.796567667399 2404.1823285257224 2608.879708873185 2218.6361210754367 2429.848416526776 2370.2179782622698 2298.960335214805 2648.120642187552 0.8884546112257125 0.938214173511599 0.9558336472468502 0.8711070526461387 0.9078824771894388 0.9851815915448809 0.8378153493953628 0.9175746670361413 0.895056645268354 0.8681478851793121 1.0 11.37075313411877 -10.766755121255132 0.9467320583794254 1.001593292766832 0.9111783851206771 0.0 0.054285788733021215 0.43727087791145414 0.6761132197605896 0.027494314285400983 0.006503241793176319 1.7109797862029966e-11 10.766755121255132 -0.09041490764615501 TAFYNEDDS(ph)EEEQR ddPTM_A549_MK2206_60min_R1 2 TAFYNEDDSEEEQR 14 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR 295.16 1.0168999999999999e-116 159166000.0 14583.1 14461.6 12850.9 13093.9 19066.8 15887.9 13957.7 16988.6 20822.5 20079.6 19142.7 True False 17044.37075743615 15197.633669512175 14673.350857535082 16301.906087807512 16262.098977637233 17569.14703246553 16493.633418604793 19396.786075405475 16106.236996699794 15543.604414112153 14389.039278357033 1.18453848291825 1.0561951618529093 1.0197588993731979 1.1329391610131803 1.1301726726187706 1.2210090397690267 1.1462637011084778 1.3480250974490517 1.1193406790490625 1.0802392094023772 1.0 13.812682649555398 -10.056523834452628 1.1010779969245885 1.0156824481018658 1.1477303804610077 0.18937559472664456 0.0841753950010944 0.42295240581120863 1.0302502125262385 0.030089994912112165 0.016150850124236674 8.779629024193085e-11 10.056523834452628 0.13204793235914192 TAFYNEDDS(ph)EEEQR ddPTM_A549_PD325901_60min_R1 2 TAFYNEDDSEEEQR 14 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR 262.24 2.1853999999999997e-83 178120000.0 18378.6 17555.3 20558.0 19904.3 20907.0 18524.699999999997 17831.9 18227.2 19091.0 21443.0 21660.0 True False 20244.38194238977 19034.746741330706 21953.189505296665 21133.743405054873 19438.564445234475 18373.840985044702 18510.502712490088 17863.644197038215 18288.671660740834 20089.085320514736 18995.9573140528 1.0657205429395975 1.0020419832828962 1.1556769233765423 1.1125390026761421 1.0233000697919152 0.967250067015687 0.9744443202552585 0.9403918897955764 0.9627665170215596 1.0575452970539823 1.0 14.213404798971965 -6.984486262415958 4.125441999323458 0.9772310428496584 1.082848513623909 0.5221138650114724 0.044469101162156896 0.108310890152197 4.287203841697337 0.005749070277369073 0.010867482468009308 1.036367386240362e-07 6.984486262415958 0.10561747077425054 TAGFPNGS(ph)LGK ddPTM_A549_MK2206_60min_R1 2 TAGFPNGSLGK 11 0 Q9NZH0;Q9NZH0-2 Q9NZH0 GPRC5B G-protein coupled receptor family C group 5 member B 1 TAGFPNGS(1)LGK;TAGFPNGS(1)LGK 126.83 6.3008e-07 54674000.0 25973.0 27435.0 26750.0 26223.0 38346.0 28973.0 26368.0 26273.0 40519.0 38951.0 39081.0 True False 30356.607421116845 28831.324315640493 30543.552236735428 32647.636177195192 32705.354196639026 32038.90362927912 31158.724287079618 29997.278207688014 31341.51119554706 30151.94204735562 29376.109119271136 1.0333774053556497 0.9814548345589696 1.039741243904164 1.1113669289775987 1.1133317235393798 1.0906449012425936 1.0606824804663821 1.0211453833417776 1.0669047785837162 1.0264103365402986 1.0 14.842355702398658 -10.821788458886724 0.7309923519236828 0.9936264977944543 1.059177343955822 0.15698777388613838 0.03795316205988074 1.1469481820315826 0.9067483238853637 0.047019886619486216 0.007957754032999425 1.5073411003092768e-11 10.821788458886724 0.06555084616136775 TAGFPNGS(ph)LGK ddPTM_A549_PD325901_60min_R1 2 TAGFPNGSLGK 11 0 Q9NZH0;Q9NZH0-2 Q9NZH0 GPRC5B G-protein coupled receptor family C group 5 member B 1 TAGFPNGS(1)LGK;TAGFPNGS(1)LGK 129.54 1.0196e-07 80452000.0 28101.5 25996.9 29868.8 28747.4 35696.7 30350.9 30776.9 32004.7 31868.8 33249.5 30808.8 True False 30954.343592769095 28187.74999912849 31895.87638368541 30523.061607917618 33189.48693892964 30103.732333208827 31948.131771265893 31366.34115129856 30529.465162737273 31150.12089560485 27019.512913074323 1.1456292233081216 1.04323679297301 1.1804756246457533 1.1296673521138119 1.2283525260320203 1.1141478541843772 1.182409611677592 1.1608773722978876 1.1299043495326868 1.1528749979993826 1.0 14.721714046654714 -10.333038876525688 0.7073236526927191 0.9984966018951847 1.147683054265723 0.0 0.062471921420028075 0.37491744798847626 0.3412890478406535 0.03015211373280947 0.009041509602285945 4.644736952982317e-11 10.333038876525688 0.1491864523705383 TAGFPNGS(ph)LGKRPSGSLGK ddPTM_A549_MK2206_60min_R1 1 TAGFPNGSLGKRPSGSLGK 19 2 Q9NZH0;Q9NZH0-2 Q9NZH0 GPRC5B G-protein coupled receptor family C group 5 member B 1 T(0.085)AGFPNGS(0.905)LGKRPS(0.005)GS(0.005)LGK 41.482 0.017563 2636400.0 1094.3 1365.5 1847.9 1248.3 2250.4 1447.8 1264.4 1082.6 2189.8 1940.0 2179.0 True False 1278.9910869336682 1434.9981174779323 2109.9600066640523 1554.133556038317 1919.3691410868544 1601.00523502814 1494.1251133413027 1236.0618653234515 1693.8137963920387 1501.7526526114848 1637.8941626593944 0.7808752946875473 0.8761238364437257 1.2882151086234903 0.9488607942255084 1.171851750158532 0.9774778319184195 0.9122232360333596 0.7546652851589011 1.0341411765225719 0.9168801543154284 1.0 10.677626420676653 TAGFPNGS(ph)LGKRPSGSLGK ddPTM_A549_PD325901_60min_R1 2 TAGFPNGSLGKRPSGSLGK 19 2 Q9NZH0;Q9NZH0-2 Q9NZH0 GPRC5B G-protein coupled receptor family C group 5 member B 1 T(0.004)AGFPNGS(0.953)LGKRPS(0.021)GS(0.021)LGK;T(0.003)AGFPNGS(0.993)LGKRPS(0.002)GS(0.002)LGK 52.06100000000001 0.0028112 8853100.0 3464.6 3683.1 4147.3 4656.7 4232.6 5659.5 4687.3 5168.7 5548.7 4372.0 4844.200000000001 True False 3816.3236414962844 3993.4877628405725 4428.76071774087 4944.333782866968 3935.316777677309 5613.410908401243 4865.677766488978 5065.606223733288 5315.507435124017 4095.9511738698143 4248.394109913877 0.8982979315856475 0.9399993643531174 1.0424552438310977 1.163812408865052 0.9263068999399128 1.3213018291551668 1.1452981151477055 1.1923578869277685 1.25118039842866 0.9641175154422871 1.0 12.052701891210182 -5.748707515005689 1.0663363374487842 1.135168848750524 0.8531355713978586 0.3122989259175776 0.1142552582351884 0.8311546596858227 1.2138484311758493 0.017997776200588365 0.21703887272940342 1.7835795532088677e-06 5.748707515005689 -0.2820332773526655 TAGPIAS(ph)AQKQPAGK ddPTM_A549_PD325901_60min_R1 2 TAGPIASAQKQPAGK 15 1 E7EVA0;P27816-4;B5MEG9;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 T(0.002)AGPIAS(0.998)AQKQPAGK;TAGPIAS(1)AQKQPAGK 82.007 6.5996e-06 1627400.0 1322.6 1149.5 1237.2 1463.8 1490.0 1389.1 1561.4 1590.9 1786.9 1363.5 1613.8 True False 1456.86937835334 1246.3723991706006 1321.1638318879766 1554.215601468995 1385.3475402209483 1377.7876301546364 1620.819931430865 1559.1682514630938 1711.8028071121362 1277.4083773036348 1415.3128307210704 1.0293620934751913 0.8806338585481498 0.933478311798299 1.0981428047092292 0.9788277970426824 0.9734862853272405 1.1452025984990846 1.1016421370734923 1.209487238407929 0.9025625639617947 1.0 10.46690525605708 -7.751887783588683 24.951865557553045 1.1048396963158371 0.9805852631492652 0.14951270426851093 0.09192867465676323 185.5641691891054 484752.5352717711 0.013775989770235544 0.020283847723249787 1.7705663920355565e-08 7.751887783588683 -0.12425443316657192 TAHLS(ph)DDD ddPTM_A549_MK2206_60min_R1 2 TAHLSDDD 8 0 J3KQW3;H7C3X7;Q2T9K0-2;Q2T9K0-7;Q2T9K0-6;Q2T9K0 J3KQW3 TMEM44 Transmembrane protein 44 1 TAHLS(1)DDD;TAHLS(1)DDD 96.948 0.0024721 37246000.0 2122.1 2082.0699999999997 2103.55 2430.2 4060.9 2646.6000000000004 2313.2 2962.5 4672.6 2928.8999999999996 3810.5 True False 2480.2585996362372 2188.0384697599993 2401.865020844293 3025.5991090958228 3463.5469894417024 2926.661455329105 2733.4784974542076 3382.4434472757466 3614.263560608933 2267.259455790606 2864.2476855500795 0.8659371925650707 0.7639138475343783 0.8385674999273027 1.0563329157459913 1.2092344551468241 1.0217906328750472 0.9543443156974193 1.180918628071143 1.2618544055539012 0.7915724143651278 1.0 11.483940539577144 -6.296130989581456 3.5721221634388294 1.1152153015220811 0.8114925862740363 0.3427147827498134 0.13248420488686793 0.12993651288578653 3.487772793133797 0.016294511973612452 0.04247784643038844 5.056721208763559e-07 6.296130989581456 -0.30372271524804484 TAHLS(ph)DDD ddPTM_A549_PD325901_60min_R1 2 TAHLSDDD 8 0 J3KQW3;H7C3X7;Q2T9K0-2;Q2T9K0-7;Q2T9K0-6;Q2T9K0 J3KQW3 TMEM44 Transmembrane protein 44 1 T(0.001)AHLS(0.999)DDD;TAHLS(1)DDD 90.601 0.0026311999999999998 51711000.0 3181.93 3154.82 3394.3999999999996 3534.3999999999996 3568.2000000000003 3920.6 3269.1 2667.2 4455.6 3669.1000000000004 3675.0 True False 3504.9571911869402 3420.6877532417543 3624.7643961853773 3752.711860795201 3317.5819416217373 3888.671933470785 3393.5073894201623 2614.000603622077 4268.346626766374 3437.432399827475 3222.998297744414 1.0874834137020342 1.061337126872109 1.1246560070236884 1.1643542794985349 1.029346476522658 1.2065386246689105 1.0529038727060693 0.8110462253273487 1.3243403292373868 1.0665324900212112 1.0 11.654187711087364 TAHNSEAADLEES(ph)FNEHELEPSSPK ddPTM_A549_MK2206_60min_R1 1 TAHNSEAADLEESFNEHELEPSSPK 25 0 A0A0D9SGE8;Q5JRC6;Q8IWS0-2 A0A0D9SGE8 PHF6 PHD finger protein 6 1 TAHNSEAADLEES(0.388)FNEHELEPS(0.306)S(0.306)PK 74.062 8.465599999999999e-06 3325000.0 535.07 507.9 250.83 426.07 467.98 543.1 518.31 680.84 603.35 884.01 628.92 True False 625.3767347944781 533.7499405837001 286.40146570244286 530.4571691270094 399.14076192935744 600.5704815193967 612.4802178866895 777.3511549850529 466.6921883519665 684.3115270283907 472.74180669102606 1.3228716520161945 1.129051700165261 0.6058306281543421 1.1220864362303054 0.8443102689037767 1.2703984987558266 1.2955913972867508 1.644346118711504 0.98720312387558 1.4475375719745518 1.0 8.884908644145092 -7.250648366819927 24.81455805793884 1.0904292067238504 0.9960789545112226 0.0 0.27688929246597105 2558.777132860693 5884058.580347737 0.040627281423235156 0.06987432113870677 5.615024210701226e-08 7.250648366819927 -0.09435025221262772 TAHNSEAADLEESFNEHELEPS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 TAHNSEAADLEESFNEHELEPSSPK 25 0 A0A0D9SGE8;Q5JRC6;Q8IWS0-2 A0A0D9SGE8 PHF6 PHD finger protein 6 1 TAHNSEAADLEES(0.051)FNEHELEPS(0.475)S(0.475)PK 66.85300000000001 0.00024156 2250800.0 492.52 690.1 640.78 466.52 761.55 675.97 424.22 538.74 1086.1 968.87 782.97 True False 575.6453350421002 725.2231423445784 731.6522393366477 580.8174209428785 649.5270038191849 747.5006967274294 501.29528280737713 615.1080448220542 840.1000841453064 750.001594090561 588.536940127318 0.9780955039416406 1.2322474476923932 1.2431713108413716 0.9868835434819614 1.1036299670139191 1.2700998794837293 0.8517651970986428 1.0451477263075248 1.4274381553069002 1.2743492259437672 1.0 9.200989160120773 TAHNSEADLEES(ph)FNEHELEPSSPK ddPTM_A549_MK2206_60min_R1 1 TAHNSEADLEESFNEHELEPSSPK 24 0 Q8IWS0-5;Q8IWS0 Q8IWS0-5 PHF6 PHD finger protein 6 1 TAHNSEADLEES(0.423)FNEHELEPS(0.289)S(0.289)PK 52.483000000000004 0.008109100000000001 19084000.0 728.59 777.9 732.19 605.25 1104.7 964.79 1136.9 795.22 1079.9 1360.5 1136.4 True False 851.558179684731 817.4917873204568 836.025551858517 753.5362771707054 942.2000933872416 1066.8834374242297 1343.4600137280345 907.9448702591119 835.3043742459411 1053.1621050917138 854.2005169555464 0.9969066545636932 0.9570256293382693 0.9787228352871915 0.8821538528873547 1.103019811724458 1.2489847714289684 1.5727689073711364 1.062917725097048 0.9778785632477103 1.2329214091853817 1.0 9.738430960862924 -6.773535912189936 24.898141810425116 1.0663376781216527 0.9557268040765837 0.11359699228214948 0.1755005722046744 488.55413300810307 1005585.2670970854 0.02833038343223907 0.05382982059580721 1.6844731304608182e-07 6.773535912189936 -0.11061087404506897 TAHNSEADLEESFNEHELEPS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 TAHNSEADLEESFNEHELEPSSPK 24 0 Q8IWS0-5;Q8IWS0 Q8IWS0-5 PHF6 PHD finger protein 6 1 TAHNSEADLEES(0.012)FNEHELEPS(0.494)S(0.494)PK 75.112 3.8692e-05 23430000.0 728.8 963.33 840.41 461.51 885.91 691.79 653.75 859.71 1546.7 1278.2 1100.5 True False 851.8036225507233 1012.3593822848898 959.5927751504605 574.5799707179713 755.593812557881 764.9947586269631 772.527912722933 981.576525251454 1196.374919572365 989.4537322515461 827.2154777451418 1.0297239902626156 1.2238158128332184 1.1600275876923365 0.6945952852383579 0.9134183690778006 0.9247829364994686 0.933889577149501 1.186603190654841 1.4462675708552906 1.1961257482133192 1.0 9.692119369452303 -8.315518451819734 6.439610791514356 1.2154351375358805 0.9830707358548813 0.30941250561131406 0.1612359326148087 0.2716611871601148 25.708735800434354 0.034295607885671674 0.0416441866875613 4.835947174323856e-09 8.315518451819734 -0.23236440168099926 TAIT(ph)TPNFK ddPTM_A549_PD325901_60min_R1 1 TAITTPNFK 9 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 T(0.016)AIT(0.492)T(0.492)PNFK 99.568 0.00085031 34138000.0 5488.6 5539.2 6627.0 5481.8 7999.5 6192.5 7844.1 7023.4 7023.9 7010.2 8109.6 True False 6045.7986315062335 6006.007823824091 7076.748071388317 5820.398335928908 7437.642716776834 6142.0703331168315 8142.611517956221 6883.312777249287 6728.709909270208 6567.574775631785 7112.170610989963 0.850063779707993 0.8444690309514521 0.9950194474318557 0.8183715850313031 1.045762696592787 0.8635999709604687 1.1448841659357814 0.9678216614507198 0.9460838719016078 0.9234276193379486 1.0 12.79607421747387 -6.761828669949062 24.999999999975028 0.9821542483030656 0.8830900049037738 0.297200945971725 0.07928944280521716 10.128587699099173 650522.27233431 0.010302620178048042 0.02036830361378583 1.7304989098901992e-07 6.761828669949062 -0.09906424339929187 TAIT(ph)TPNFKK ddPTM_A549_PD325901_60min_R1 1 TAITTPNFKK 10 1 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 T(0.007)AIT(0.497)T(0.497)PNFKK 55.452 0.010595 20502000.0 9929.7 8627.0 9096.6 9377.7 9777.6 11129.0 10185.0 9091.7 10826.0 10327.0 11827.0 True False 10937.755834141215 9354.027566459139 9713.949978299524 9956.939230698044 9090.855106888817 11038.369113808187 10572.595748445852 8910.35891119933 10371.020868429114 9674.951457583156 10372.35397753012 1.054510466749972 0.9018230178726058 0.9365231845483762 0.9599498100689585 0.8764505267157827 1.0642106061672088 1.0193053352546124 0.8590488649444528 0.999871474777674 0.9327633320789318 1.0 13.340455726575737 -7.2592454759277025 24.99898572912983 0.9938278151323775 0.9436703942224335 0.03582074071695218 0.06497764699415781 308.01242152024184 3509719.6943002017 0.00882766241913359 0.014842997553663 5.504964517758664e-08 7.2592454759277025 -0.05015742090994402 TAITT(ph)PNFK ddPTM_A549_MK2206_60min_R1 2 TAITTPNFK 9 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 TAIT(0.102)T(0.898)PNFK;TAIT(0.069)T(0.931)PNFK 150.04 2.4733000000000002e-05 41299000.0 10259.0 12338.599999999999 10695.0 10128.8 14489.0 11303.2 10590.7 11342.0 16157.0 15470.7 14387.7 True False 11990.46839153111 12966.582037578331 12211.71181950974 12610.356454699106 12357.687293462233 12499.297121543088 12514.893101758722 12949.763233418244 12497.465297427227 11975.85812513222 10814.83700968085 1.108705418380129 1.1989623168589 1.129162816654424 1.1660237175475696 1.1426605211340963 1.155754553707504 1.1571966448089854 1.1974071566521367 1.1555851730581035 1.107354471862321 1.0 13.40072430216815 -10.532380309271142 0.7548941509708057 0.995353952579029 1.158608175603962 0.4214102935242696 0.03970051174435953 0.1975736517992867 0.19425390667230183 0.01888157388674942 0.004811164634305218 2.935078294466488e-11 10.532380309271142 0.16325422302493287 TAITT(ph)PNFK ddPTM_A549_PD325901_60min_R1 1 TAITTPNFK 9 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 T(0.002)AIT(0.478)T(0.52)PNFK 118.6 0.00017333 32321000.0 5985.9 7082.8 6575.6 7245.0 7536.1 6654.8 7788.3 7552.1 8178.2 7207.1 7740.5 True False 6593.584161413324 7679.692413088764 7021.859758295009 7692.507195411171 7006.790334133615 6600.605515191908 8084.6880184212905 7401.467440992165 7834.498694456587 6752.042476028623 6788.467571072286 0.9712919878280897 1.131285129182064 1.0343806882450581 1.133172857478361 1.0321608317010555 0.9723262939811461 1.1909444854494986 1.090300183878326 1.15408943365094 0.9946342683879229 1.0 12.72887022185199 TAITT(ph)PNFKK ddPTM_A549_PD325901_60min_R1 1 TAITTPNFKK 10 1 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 T(0.001)AIT(0.192)T(0.808)PNFKK 62.338 0.0043714 23930000.0 8740.1 7829.2 8350.6 7845.6 10429.0 10324.0 9631.7 8843.5 11036.0 9362.9 11345.0 True False 9627.388517878448 8488.994160579792 8917.321932237099 8330.204893349603 9696.50301809682 10239.924766911288 9998.239614168475 8667.109454908457 10572.195298723791 8771.724896117488 9949.636921880377 0.9676120438834035 0.853196375629701 0.896245963772497 0.8372370729459021 0.9745584782870934 1.0291757224218439 1.0048848709424978 0.8710980634728995 1.062570964320752 0.8816125618440882 1.0 13.280428165035975 -6.9360265328668085 5.286100259041153 1.0145471804535922 0.8871541757060573 0.15490176331362482 0.06833197269816868 0.1250873580523571 6.857615717649619 0.008360061888364977 0.015960605505129278 1.1587065637611158e-07 6.9360265328668085 -0.1273930047475349 TAITTAS(ph)IR ddPTM_A549_PD325901_60min_R1 1 TAITTASIR 9 0 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 TAIT(0.011)T(0.031)AS(0.958)IR 56.043 0.019573 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TAITTAS(ph)IRR ddPTM_A549_PD325901_60min_R1 2 TAITTASIRR 10 1 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 TAITT(0.001)AS(0.999)IRR;TAITTAS(1)IRR 127.56 6.521899999999999e-07 50827000.0 2927.6000000000004 2710.6000000000004 3394.1000000000004 3272.8 3331.5 3378.9 3592.0 3616.6000000000004 3099.3999999999996 3278.8 3728.3999999999996 True False 3224.8077968147877 2939.0317748515263 3624.4440363813324 3474.9534229319083 3097.506933051068 3351.383358670724 3728.6955256178185 3544.4640758321843 2969.142996453834 3071.776008436493 3269.830436274905 0.986230894739787 0.8988330838952509 1.108450149638467 1.0627319950237806 0.9472989481925083 1.0249410249201567 1.1403329922715097 1.0839901777506697 0.9080418860607268 0.9394297558548504 1.0 11.67500010843191 -8.763340983814771 24.999903764067575 0.9565753369764317 1.031367198330795 0.21731607948510545 0.06929173010913625 66.42682071612795 873294.2349462338 0.012939546481994897 0.014114299185282763 1.7244833921033493e-09 8.763340983814771 0.07479186135436333 TAKDS(ph)DDDDDVAVTVDRDR ddPTM_A549_MK2206_60min_R1 3 TAKDSDDDDDVAVTVDRDR 19 2 A0A0C4DFZ1;A8MZ54;Q16623-3;Q16623-2;Q16623 A0A0C4DFZ1 STX1A Syntaxin-1A 1 T(0.009)AKDS(0.991)DDDDDVAVTVDRDR;T(0.062)AKDS(0.938)DDDDDVAVTVDRDR;TAKDS(1)DDDDDVAVTVDRDR 234.8 2.3138999999999997e-85 146106000.0 8146.950000000001 8402.64 8719.599999999999 8085.4 12204.0 8614.0 8321.99 8910.7 11697.6 12561.199999999999 12279.6 True False 9521.955986195959 8830.298485422762 9956.170395642554 10066.323362967398 10408.807766541042 9525.52776248957 9833.987861416632 10173.819012874263 9048.11227722874 9723.616195867717 9230.236420281002 1.0316047772377726 0.956670889384861 1.0786473869473705 1.0905813139140528 1.127685932688619 1.0319917420056266 1.0654101816730335 1.1022273482096285 0.9802687455922481 1.0534525610311176 1.0 13.1721518857291 -8.778509076352515 24.992937366314433 0.9906824556072154 1.0601815406758333 0.14388952302677127 0.04678604207750097 201.05252992405755 294373.67309297476 0.007779152482749704 0.008291565884470973 1.6652940243182987e-09 8.778509076352515 0.0694990850686179 TAKDS(ph)DDDDDVAVTVDRDR ddPTM_A549_PD325901_60min_R1 4 TAKDSDDDDDVAVTVDRDR 19 2 A0A0C4DFZ1;A8MZ54;Q16623-3;Q16623-2;Q16623 A0A0C4DFZ1 STX1A Syntaxin-1A 1 T(0.001)AKDS(0.999)DDDDDVAVTVDRDR;T(0.006)AKDS(0.993)DDDDDVAVT(0.001)VDRDR;T(0.001)AKDS(0.999)DDDDDVAVTVDRDR;T(0.001)AKDS(0.68)DDDDDVAVT(0.319)VDRDR 249.27 1.1371999999999997e-97 465039000.0 39944.4 40975.0 40630.2 40187.1 48588.0 46845.0 41367.299999999996 47434.4 46760.8 47888.2 50944.0 True False 43999.52608248692 44428.10705177501 43387.60970124058 42669.36589547391 45175.34649950027 46463.509851410265 42941.55523855513 46488.28368043307 44795.6061910623 44864.53087934867 44678.210960623546 0.9848094884834405 0.994402105557249 0.9711134078192966 0.9550374775095605 1.0111270242963593 1.0399590505618088 0.9611296942127115 1.0405135452134555 1.0026275723202573 1.0041702636412486 1.0 15.447283797019924 -6.784262720095848 24.99837394871494 1.004751666189423 0.9772573440225552 0.32028849869827347 0.02209868692159473 226.6722323873762 248273.13629175385 0.002991053789984245 0.005655514910606875 1.6433772854033552e-07 6.784262720095848 -0.027494322166867757 TAKPFPGSVNQPATPFS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 TAKPFPGSVNQPATPFSPTR 20 1 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 TAKPFPGSVNQPAT(0.043)PFS(0.786)PT(0.172)R;TAKPFPGSVNQPAT(0.038)PFS(0.823)PT(0.139)R 89.565 1.1804000000000002e-06 35062000.0 3644.3 4544.3 4498.8 3943.7 5183.0 3853.4 3778.7 4018.7 6349.299999999999 6072.2 5051.799999999999 True False 4259.368745419322 4775.585459725351 5136.797487948611 4909.906677039419 4420.587565878582 4261.164230320097 4465.240877714946 4588.36303175259 4911.193687748634 4700.485802673945 3797.298637412907 1.1216839000898868 1.2576270437815629 1.3527504624835887 1.2929998785622325 1.164140086935675 1.122156732245642 1.1758993179312087 1.2083229342421786 1.2933388065297446 1.2378499168757446 1.0 11.89075774839982 -10.878739374218384 1.0354788857910564 0.9950639021206017 1.2269479745660976 0.0 0.0985241589924631 0.3417515393435521 0.6274784633431899 0.05982487676880323 0.01321674923556232 1.3220887988962549e-11 10.878739374218384 0.23188407244549591 TAKPFPGSVNQPATPFS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 TAKPFPGSVNQPATPFSPTR 20 1 H0Y9Y3;Q9UMS6-5;Q9UMS6;Q9UMS6-3;Q9UMS6-4;Q9UMS6-2 H0Y9Y3 SYNPO2 Synaptopodin-2 1 TAKPFPGSVNQPAT(0.016)PFS(0.752)PT(0.232)R;TAKPFPGSVNQPAT(0.014)PFS(0.862)PT(0.124)R 139.47 2.7494e-18 50986000.0 5126.4 5278.299999999999 6103.6 6331.7 7170.3 6595.4 6305.9 7368.5 6370.5 6951.6 7104.9 True False 5646.8283541437795 5723.120865195459 6517.82699992843 6722.794728665968 6666.682864192129 6541.689249097898 6545.874475220886 7221.5294870235775 6102.770039010502 6512.674789632526 6231.042341671912 0.9062413709467144 0.9184853113451693 1.0460251499718694 1.0789197633444598 1.0699145501879748 1.0498547258054152 1.0505263993222196 1.1589601050738323 0.9794139895658305 1.045198288266654 1.0 12.605257805114599 -5.751352170321648 22.87287132444456 1.0233371550915653 0.9123630767671628 0.4603769216480843 0.05102261711837102 62.028510580595906 140640.6930093943 0.00825768846477075 0.03110183845946377 1.7727513700184723e-06 5.751352170321648 -0.11097407832440254 TALIHDGLAR ddPTM_A549_MK2206_60min_R1 2 TALIHDGLAR 10 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ; 101.97 0.00044161 13452400.0 684.06 792.97 716.0899999999999 531.9200000000001 671.44 696.41 491.46 580.11 782.96 773.3299999999999 983.9300000000001 False True 799.5126043387052 833.3287859512831 817.6423297646312 662.2404238787964 572.6720654511898 770.1036439604554 580.7519204387194 662.3423690123658 605.6208101301992 598.6342158989892 739.5930259134728 1.0810169597681447 1.1267396483654466 1.1055300700743622 0.8954119369376988 0.7743070112699906 1.041253252772765 0.7852317424456937 0.8955497764386101 0.8188568427645673 0.8094103039433272 1.0 9.53058781050455 -6.260379176808124 23.44840255368141 0.9001968912453887 1.1066599970115385 0.5910153123996796 0.08251046206744801 23.81590973067954 526704.328038982 0.01224879564329775 0.030513034926547198 5.490612863295827e-07 6.260379176808124 0.2064631057661498 TALIHDGLAR ddPTM_A549_PD325901_60min_R1 3 TALIHDGLAR 10 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ;; 127.76 1.6504e-06 18539000.0 694.06 808.62 830.0899999999999 1030.28 947.77 976.78 602.58 948.95 1000.2 999.54 912.9 False True 764.5204602600331 876.7652452521365 886.424899136672 1093.9180556643505 881.2019048289987 968.8254275303772 625.5115116444283 930.0224478131263 958.1650722891926 936.4288738174367 800.6190873498982 0.9549116082039039 1.0951090963298002 1.1071743268959484 1.3663402146522525 1.1006506324322531 1.2100953410157294 0.7812847851465952 1.1616291223977206 1.1967802010076751 1.1696309626055479 1.0 9.644972200824665 TALINS(ph)TGEEVAMR ddPTM_A549_MK2206_60min_R1 4 TALINSTGEEVAMR 14 0 P02545;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 T(0.001)ALINS(0.89)T(0.109)GEEVAMR;T(0.002)ALINS(0.742)T(0.256)GEEVAMR;TALINS(0.982)T(0.018)GEEVAMR;TALINS(0.971)T(0.029)GEEVAMR 97.417 4.2561e-05 11450400.0 4348.16 4470.150000000001 4451.1 4454.7 6400.299999999999 5240.2699999999995 4728.0599999999995 5054.610000000001 6715.8 6372.9 6679.200000000001 True False 5082.023105694506 4697.661541445613 5082.332910689086 5546.101699979082 5458.82434842614 5794.791893190294 5587.087301000062 5771.116446593916 5194.682022928876 4933.257463828726 5020.5703034578355 1.0122402035072282 0.9356828522469202 1.012301910639258 1.104675637379143 1.0872916857008186 1.1542098891034802 1.1128391723051956 1.149494200413677 1.0346796696285925 0.9826089797868234 1.0 12.293635538726146 -6.001046286724528 24.163928809010002 1.0529410051053458 0.9739692229185647 0.2708104590906879 0.058802808058071476 33.532154184952034 774564.2837354642 0.009420422052261757 0.028734902273640388 9.9759373549212e-07 6.001046286724528 -0.07897178218678114 TALINSTGEEVAMR ddPTM_A549_PD325901_60min_R1 1 TALINSTGEEVAMR 14 0 P02545;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 43.544 0.041582999999999995 2111800.0 3290.1 3516.8 3163.3 3779.7 4016.8 3542.0 3183.4 4000.1 4103.2 3584.6 5254.3 False True 3624.1085299563924 3813.1730782106715 3377.980560468186 4013.1634846784805 3734.673825207724 3513.155126346357 3304.5460290233214 3920.314867482254 3930.756773262364 3358.267744248338 4608.054409751967 0.7864725994308439 0.8275017478398046 0.7330600422858308 0.8709019312327289 0.810466520817133 0.7623944541348104 0.7171239172067831 0.8507527296521807 0.8530187414766096 0.7287821378891011 1.0 12.16994203621139 -9.911452882005321 0.5772739565449287 1.0007539537120207 0.7899174559727076 0.0 0.08997594734469792 0.3011588962181251 0.20260025192666933 0.028988059268244794 0.011203696839941357 1.2261599254661718e-10 9.911452882005321 -0.21083649773931312 TALPAQSAAT(ph)LPAR ddPTM_A549_PD325901_60min_R1 2 TALPAQSAATLPAR 14 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 TALPAQSAAT(1)LPAR;TALPAQSAAT(1)LPAR 253.84 1.1929999999999999e-69 618140000.0 39243.0 47632.0 52684.0 51826.0 53526.0 50758.0 52399.0 59919.0 59441.0 60177.0 60906.0 True False 43226.920470830286 51646.115804518544 56259.453054628364 55027.17431461412 49766.51841467547 50344.64367676124 54393.072618833 58723.86853945387 56942.9014816456 56377.41395012892 53414.94811494455 0.809266357009456 0.9668850692016095 1.0532529758067475 1.0301830528076186 0.9316964664569558 0.9425197524936977 1.0183118122998756 1.0993901634629497 1.066048053797772 1.0554613631526775 1.0 15.704955914598399 -7.892596561467442 5.47073602744526 1.0380959523943447 0.9631706412215524 0.34010743983995617 0.06329319142195648 0.2479962881056527 11.183593279022087 0.010429587426078872 0.014500891531969597 1.2805703395970041e-08 7.892596561467442 -0.07492531117279233 TALPTSGSS(ph)AGELELLAGEVPAR ddPTM_A549_PD325901_60min_R1 1 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTS(0.002)GS(0.126)S(0.872)AGELELLAGEVPAR 155.93 8.3097e-33 3517300.0 1352.8 1571.0 1763.1 1648.4 1828.5 1629.3 1340.9 1769.0 1823.3 1716.9 1885.5 True False 1490.135260121275 1703.3936834249787 1882.7545683815802 1750.2179242119769 1700.072467982554 1616.0315209926923 1391.928683268635 1733.7159072463458 1746.673041696546 1608.494640992012 1653.595453169277 0.9011486196731403 1.0301151228737708 1.1385823326818523 1.0584317469291014 1.028106641636078 0.9772834812138665 0.8417588961077922 1.0484522704289674 1.0562880046318928 0.97272560704565 1.0 10.691390611617939 -4.232683350414392 13.528830318291401 1.017758272736808 1.01669205433096 0.0 0.0783316520971647 0.0 0.0 0.010078429902087235 0.0 5.852166174487741e-05 4.232683350414392 -0.001066218405847863 TALPTSGSSAGELELLAGEVPARS(ph)PGAFDMSGVR ddPTM_A549_MK2206_60min_R1 3 TALPTSGSSAGELELLAGEVPARSPGAFDMSGVR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGSSAGELELLAGEVPARS(0.983)PGAFDMS(0.016)GVR;TALPTSGSSAGELELLAGEVPARS(0.997)PGAFDMS(0.003)GVR;TALPTSGSSAGELELLAGEVPARS(0.988)PGAFDMS(0.012)GVR 68.161 0.00011649 47060000.0 2094.6800000000003 2485.65 2158.1 2036.5200000000002 2879.19 1826.5 1906.1 1953.8400000000001 2496.7799999999997 3158.43 2514.1 True False 2448.2107739908743 2612.1589679304457 2464.1510311064944 2535.4674914228567 2455.6649650399304 2019.7790176674241 2252.413697041963 2230.80280338405 1931.2633165383652 2444.9384693750985 1889.7795843698868 1.295500699785148 1.382255893510154 1.3039356819637362 1.3416736599301675 1.299445176226056 1.0687907914620018 1.1918922797512337 1.1804566108316126 1.0219516246823623 1.293769119741189 1.0 10.884002259277532 -7.730834719090355 0.5395729795907958 0.9976195841140046 1.3627203779086878 0.30441176485197596 0.10619016186319984 0.22680133557274335 0.135211067542459 0.015092024623632393 0.032171558998429405 1.8585116205286172e-08 7.730834719090355 0.3651007937946832 TALPTSGSSAGELELLAGEVPARS(ph)PGAFDMSGVR ddPTM_A549_PD325901_60min_R1 2 TALPTSGSSAGELELLAGEVPARSPGAFDMSGVR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGS(0.001)S(0.002)AGELELLAGEVPARS(0.995)PGAFDMS(0.003)GVR;TALPTSGSSAGELELLAGEVPARS(0.998)PGAFDMS(0.002)GVR 111.04 3.175e-15 86487000.0 2516.94 2341.97 2460.45 2080.06 3649.1 2851.3 2171.65 3006.7 3337.7 3528.3999999999996 3277.8999999999996 True False 2772.4578959267023 2539.336031044431 2627.4309328877885 2208.540582040988 3392.799804711586 2828.0799581455026 2254.2933291224786 2946.7290097894816 3197.428076164407 3305.6162218394866 2874.7390803201124 0.9644207068761104 0.8833274812410686 0.9139719673603264 0.7682577515156815 1.1802113895963684 0.9837692670983503 0.7841731949013804 1.025042248168607 1.1122498379255907 1.1498839127589258 1.0 11.489215303463254 -8.501191967246747 24.41458630583614 1.053829989443721 0.9276124419766765 0.29045697869638865 0.10953103488157229 637.3614965725862 717531.2161066819 0.017634862376514484 0.021213390643956824 3.1536103534971095e-09 8.501191967246747 -0.1262175474670446 TALSSTESCTMKGEEKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TALSSTESCTMKGEEKSPK 19 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 TALSSTES(0.066)CT(0.313)MKGEEKS(0.621)PK;T(0.001)ALS(0.001)S(0.001)T(0.005)ES(0.016)CT(0.016)MKGEEKS(0.959)PK 61.222 0.0010655999999999999 57468000.0 5771.3 6379.200000000001 5992.5 5047.5 8092.0 6242.2 6089.1 5833.5 8095.9 8596.3 9406.5 True False 6745.354345262062 6703.874032233782 6842.326608547178 6284.137726590889 6901.677519407585 6902.7454607629925 7195.410651412947 6660.416489344495 6262.191576495704 6654.389859610363 7070.606443807062 0.9539994056903169 0.9481328207859044 0.967714249537983 0.8887692698686379 0.9761082835338069 0.9762593231035941 1.0176511319923904 0.941986595107151 0.8856654130397223 0.9411342453430921 1.0 12.78761824452723 TALSSTESCTMKGEEKS(ph)PK ddPTM_A549_PD325901_60min_R1 4 TALSSTESCTMKGEEKSPK 19 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 TALSSTES(0.001)CT(0.004)MKGEEKS(0.995)PK;TALSSTESCTMKGEEKS(1)PK;TALSSTESCT(0.001)MKGEEKS(0.999)PK;TALSSTES(0.001)CT(0.001)MKGEEKS(0.998)PK 100.62 9.7148e-10 281282000.0 29874.4 27701.600000000002 36748.7 31802.3 37407.6 34651.5 35157.4 42261.4 31208.6 37844.6 38451.5 True False 32907.22709562911 30036.111050773656 39242.687769884964 33766.65584273632 34780.21922521419 34369.30967266821 36495.33409586748 41418.46322357306 29897.011072829948 35455.08549740015 33722.209264141304 0.9758324799502739 0.8906922679799844 1.163704532597569 1.0013180209590324 1.0313742777878414 1.0191891463414589 1.082234375867983 1.2282250815522817 0.8865673906075039 1.0513867943729744 1.0 15.041411435106218 TAMPS(ph)PGVSQNK ddPTM_A549_MK2206_60min_R1 3 TAMPSPGVSQNK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 T(0.028)AMPS(0.964)PGVS(0.008)QNK;TAMPS(0.865)PGVS(0.135)QNK;TAMPS(1)PGVSQNK 169.09 1.3218e-15 19238800.0 7022.200000000001 8868.4 7446.8 7603.200000000001 10035.5 7627.799999999999 6788.7 6938.5 10167.9 10826.7 11699.5 True False 8207.375683693324 9319.763680000951 8502.868216692392 9465.984341320614 8559.291243946465 8434.968733076144 8022.118915643861 7922.053623265069 7864.8868847997965 8380.940950530285 8794.19126022652 0.9332723659096219 1.0597635876025846 0.9668732422443784 1.0763905470344286 0.9732891849484288 0.9591522953594345 0.9122065552435151 0.9008279884807752 0.8943274773167957 0.9530087193389525 1.0 13.102335193967226 -7.112504945831556 3.3700930659045936 0.9421887822734718 1.0107448322859784 0.34004164746235466 0.04631367852978727 0.2680882635676057 5.693457639597772 0.00789721095486489 0.014368517125608781 7.717827263204555e-08 7.112504945831556 0.06855605001250664 TAMPS(ph)PGVSQNK ddPTM_A549_PD325901_60min_R1 6 TAMPSPGVSQNK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 TAMPS(0.717)PGVS(0.283)QNK;TAMPS(0.937)PGVS(0.063)QNK;TAMPS(1)PGVSQNK;TAMPS(0.999)PGVS(0.001)QNK;T(0.001)AMPS(0.999)PGVSQNK;TAMPS(1)PGVSQNK 172.33 9.5838e-16 74143500.0 23033.600000000002 22441.2 23081.7 24912.6 28097.5 25841.9 24914.0 25605.8 25878.6 27820.2 29693.6 True False 25371.954115559896 24332.39868139826 24648.1629635376 26451.394721380326 26124.02853111282 25631.452134254643 25862.11590346391 25095.072231638496 24791.012437255642 26063.627824174982 26041.475443239044 0.9742901922305263 0.9343709704326872 0.9464964079036782 1.015741015866584 1.0031700618520527 0.9842549893197065 0.9931125430981792 0.9636578498148708 0.9519818679740725 1.000850657674302 1.0 14.668523569771201 -6.181625679008819 24.999998288720704 0.9814231839041858 0.9499842275165655 0.36093454163402294 0.02033123094544283 114.37985516480312 35825.92795593577 0.0032995620708832895 0.00872981979691679 6.582249208993972e-07 6.181625679008819 -0.03143895638762029 TAMPSPGVS(ph)QNK ddPTM_A549_MK2206_60min_R1 1 TAMPSPGVSQNK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 T(0.001)AMPS(0.36)PGVS(0.639)QNK 83.182 0.00020825 10319000.0 1940.1 2148.9 1933.4 2056.3 2669.0 1281.1 1506.0 1460.2 2560.4 2433.2 2486.5 True False 2267.5414491090264 2258.2698313059896 2207.5851923179166 2560.093592310814 2276.3936356029217 1416.6651516746444 1779.620706020248 1667.1878216749526 1980.4734881186303 1883.5384300692087 1869.0334260911359 1.213216102748533 1.2082554542798605 1.1811373523344748 1.3697420049169209 1.2179523404050252 0.7579667286301205 0.9521609839488617 0.8920053533561892 1.0596244350003725 1.0077606980033569 1.0 10.868076655363508 -7.038457452469517 24.5671534576211 0.9939944572281236 1.2433837599984514 0.7001874117755926 0.09262774084110392 225.36017285444314 143962.88991416796 0.014395112330714213 0.024936885750896205 9.152559218797338e-08 7.038457452469517 0.24938930277032778 TAMS(ph)TPHVAEPAENEQDEQDENGAEASADLR ddPTM_A549_MK2206_60min_R1 1 TAMSTPHVAEPAENEQDEQDENGAEASADLR 31 0 P26038 P26038 MSN Moesin 1 T(0.06)AMS(0.47)T(0.47)PHVAEPAENEQDEQDENGAEASADLR 68.104 0.00013392 6173900.0 234.27 276.55 352.89 297.24 267.12 149.89 316.95 289.96 348.47 324.6 356.11 True False 273.8090486484059 290.62521375944505 402.9351083671616 370.0638133436106 227.82700185172433 165.75126031107058 374.5357123327476 331.0627179652576 269.5421013922429 251.27263455550906 267.67805886399134 1.0229043419189234 1.0857266934497358 1.5052974833917752 1.3824958792444098 0.8511231843902621 0.6192187025507746 1.3992021382785476 1.236794376686183 1.0069637479297424 0.938712106707192 1.0 8.064355078228932 -6.75630140583178 24.999253590667447 1.01345342083129 1.2557355169600508 0.2130013582633834 0.2231443932787582 161.3483605662999 785045.0280259798 0.03225663862751289 0.06557925584837467 1.7526637090016928e-07 6.75630140583178 0.24228209612876084 TAMST(ph)PHVAEPAENEQDEQDENGAEASADLR ddPTM_A549_MK2206_60min_R1 1 TAMSTPHVAEPAENEQDEQDENGAEASADLR 31 0 P26038 P26038 MSN Moesin 1 T(0.096)AMS(0.377)T(0.527)PHVAEPAENEQDEQDENGAEASADLR 54.934 0.0013287000000000002 3383100.0 277.94 311.61 154.68 261.72 452.38 231.48 268.77 233.49 371.75 351.0 387.04 True False 324.84947701941314 327.4696180060773 176.6159499057285 325.84141174905744 385.83550126416225 255.97505995601182 317.60202998476905 266.5879225331355 287.5492185627638 271.70885621991295 290.92728623941815 1.1166002378755178 1.1256064092131486 0.6070793571434984 1.1200098002526542 1.3262265848334334 0.8798592365288058 1.0916886968223358 0.9163386699786812 0.988388618612163 0.9339407785776085 1.0 8.184514803765946 TANKDHLVTAYNHLFETK ddPTM_A549_PD325901_60min_R1 1 TANKDHLVTAYNHLFETK 18 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 0 75.97 0.0010630000000000001 2099800.0 866.07 1171.7 838.59 1195.7 1319.3 1013.3 1178.5 881.34 1375.3 1102.9 832.53 False True 953.9927888329635 1270.4432710815072 895.501760251324 1269.5556733682738 1226.6369193379173 1005.0480207585441 1223.348462399945 863.7609823021453 1317.50092373458 1033.2627057779084 730.1340878424919 1.3065994379908523 1.7400136389133682 1.2264894560634538 1.738797974930529 1.6800159583872674 1.3765252677469264 1.6755120501425647 1.1830169234455468 1.8044643383624595 1.415168423146967 1.0 9.512017626508666 -10.990069329491812 1.22866670173707 0.9960976822932349 1.5525383364792695 0.12464643520234531 0.24337438847432397 0.31657578442293055 0.840426476786078 0.1495622583368622 0.033237195517446826 1.023129649839829e-11 10.990069329491812 0.5564406541860346 TANLTGTDSPETDASAS(ph)LQQNKSPR ddPTM_A549_MK2206_60min_R1 1 TANLTGTDSPETDASASLQQNKSPR 25 1 A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;R4GN62;A0A087WYL6;Q8TEW8-6;Q8TEW8-3 A0A087WZG6 PARD3B Partitioning defective 3 homolog B 1 TANLTGTDSPET(0.001)DAS(0.11)AS(0.571)LQQNKS(0.318)PR 79.021 1.201e-06 7804600.0 2479.1 2374.6 2495.9 1834.5 2807.6 1880.2 2005.6 2483.2 3231.8 3139.8 3327.5 True False 2897.5114718242307 2495.4569972633467 2849.8561505670286 2283.952582353835 2394.6057592052307 2079.161516024249 2369.9915590931014 2835.201204481058 2499.802460124116 2430.5169993141944 2501.1899156719296 1.1584532040805993 0.9977079235876246 1.1394001441915425 0.9131464060538023 0.9573866199448251 0.831268950429018 0.9475456238821502 1.1335409545337938 0.9994452818080226 0.9717442822254665 1.0 11.28839889036 -6.2539545750050785 24.994382956787064 0.985864694182255 1.088439172723333 0.32785184842419024 0.07953855595144568 644.1728424859643 2151110.3551480174 0.011093432129399384 0.028739243035315838 5.572440307765617e-07 6.2539545750050785 0.10257447854107793 TANPNHDMS(ph)GSK ddPTM_A549_PD325901_60min_R1 1 TANPNHDMSGSK 12 0 K7EM84;L7N2F3;Q32NC0-2;Q32NC0 K7EM84 C18orf21 UPF0711 protein C18orf21 1 TANPNHDMS(0.825)GS(0.175)K 47.545 0.0085889 3975100.0 749.47 947.12 922.49 1025.7 1152.6 1002.2 955.6 882.19 1117.5 1209.3 1139.2 True False 825.5556426693465 1026.9371263179291 985.0957187830102 1089.055159466286 1071.645352254138 994.0384154783508 991.9658809243844 864.5940283853329 1070.5353612109307 1132.9445916195712 999.0856219837921 0.8263112034683443 1.0278769944450155 0.985997293031799 1.090051878940916 1.0726261380143485 0.9949481742161203 0.9928737428477143 0.8653853176953826 1.0715151310908342 1.1339814793550804 1.0 9.96446451255531 -5.260287703010317 24.488801492713034 1.0215380256317406 0.8263111221058207 0.4133536091659501 0.06750416003678174 50.16899380639912 1066588.4681519242 0.008224288407851393 0.0698925285961885 5.491769452036307e-06 5.260287703010317 -0.19522690352591987 TANS(ph)PGSGARPDPVR ddPTM_A549_MK2206_60min_R1 4 TANSPGSGARPDPVR 15 1 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 T(0.004)ANS(0.974)PGS(0.023)GARPDPVR;TANS(0.998)PGS(0.002)GARPDPVR;T(0.011)ANS(0.944)PGS(0.046)GARPDPVR;T(0.021)ANS(0.966)PGS(0.013)GARPDPVR 119.87 5.281300000000001e-07 390405000.0 5745.76 6400.5599999999995 5442.78 5351.4 8146.199999999999 5089.719999999999 5097.72 5949.7 8773.8 8500.1 9474.199999999999 True False 6715.503817655111 6726.321164997848 6214.648046469495 6662.493240233474 6947.904771205889 5628.310792117302 6023.909738043516 6793.088195192075 6786.548308879559 6579.9215064241625 7121.494665382113 0.9429907811768025 0.944509752663971 0.872660633543568 0.9355470379863002 0.9756245139071644 0.7903271794159671 0.8458771677982145 0.9538851764101661 0.9529668458321336 0.9239523183819036 1.0 12.797964351700786 -8.908062456364453 1.4929121971807013 0.9832761713461158 0.9033819494982432 0.1489854947315583 0.05395981485270721 0.33605392054280636 1.4943900382309208 0.01087021413973871 0.011011085718735806 1.235769703272378e-09 8.908062456364453 -0.07989422184787254 TANS(ph)PGSGARPDPVR ddPTM_A549_PD325901_60min_R1 2 TANSPGSGARPDPVR 15 1 Q13206;A0A3B3ISR7;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 TANS(0.86)PGS(0.14)GARPDPVR;T(0.001)ANS(0.989)PGS(0.01)GARPDPVR 115.63 8.3531e-07 39925000.0 4200.799999999999 4261.1 4425.3 3637.8 5061.700000000001 4671.5 4164.200000000001 4159.3 4588.6 4897.6 4361.4 True False 4627.262123534485 4620.197851331748 4725.627469490676 3862.4986439567665 4706.183653917031 4633.456852830886 4322.670909737676 4076.339498592273 4395.757099286337 4588.364700170353 3824.975449192513 1.2097494964343736 1.207902616030415 1.2354660918119875 1.0098100485251937 1.2303827087074635 1.2113690439004128 1.1301172954326362 1.0657165131485549 1.149224918610738 1.1995801701522026 1.0 11.901234772482571 -14.999999993549634 0.1402643068917074 0.4197600806083195 1.2244692540827682 0.0 0.08642091896649137 40.27975968779458 0.3792251676667958 6.493045693204821 0.14695516148929413 1.0000000148525158e-15 14.999999993549634 0.8047091734744487 TAPAAAVS(ph)PMQR ddPTM_A549_MK2206_60min_R1 2 TAPAAAVSPMQR 12 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 TAPAAAVS(1)PMQR;TAPAAAVS(1)PMQR 74.46 0.00046986 16565600.0 3335.9 3819.7 3316.8 3151.7 4044.5 2813.5 3218.2 3293.8999999999996 4453.700000000001 5478.7 6326.700000000001 True False 3898.9183650754094 4014.1064147421885 3787.1721143478185 3923.866641485191 3449.559407716753 3111.2227025498487 3802.9052829444645 3760.820412145684 3444.944061097463 4241.057864877595 4755.605781962912 0.8198573523194981 0.8440788826455955 0.796359557117166 0.825103429802288 0.72536698075359 0.6542221633151577 0.7996678987497543 0.7908183698509544 0.7243964741912514 0.8918018143898939 1.0 12.215413411861023 -10.808698070458423 0.954452197332281 1.0058521265081333 0.772835854446822 0.5161940675687555 0.060624176111441226 0.27230604645641726 0.4220186998415725 0.04501620845125245 0.010127040717740104 1.5534666333104656e-11 10.808698070458423 -0.23301627206131126 TAPAAAVS(ph)PMQR ddPTM_A549_PD325901_60min_R1 1 TAPAAAVSPMQR 12 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 TAPAAAVS(1)PMQR 81.565 0.00025675 15910000.0 3571.4 3540.0 3243.4 3280.7 3594.0 3569.2 3429.1 3544.0 3349.3 3782.1 3561.3 True False 3933.965898874281 3838.328223631082 3463.516628148613 3483.341387989706 3341.569838626905 3540.13361856449 3559.596276975521 3473.312139785783 3208.540568504491 3543.297560542774 3123.282676940729 1.259561271196759 1.228940387615105 1.1089347287454445 1.1152821400724626 1.0698902994909156 1.1334656464819473 1.1396971216393912 1.1120710159952316 1.0272975264753406 1.1344786646124045 1.0 11.608847433003925 -2.00000000000235 0.15304527584910788 0.9696058038827455 1.9892055640210058 0.3983372437657342 0.056240602691294425 21.15459324610082 0.20071522134212919 0.07143315718099534 4.854028945682958 0.009999999999945887 2.00000000000235 1.0195997601382603 TAPAAPAEDAVAAAAAAPS(ph)EPS(ph)EPSRPSPQPKPRTP ddPTM_A549_MK2206_60min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPRTP 36 3 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 2 TAPAAPAEDAVAAAAAAPS(0.395)EPS(0.447)EPS(0.468)RPS(0.439)PQPKPRT(0.251)P 76.825 5.570700000000001e-06 13406000.0 1924.3 2489.2 2187.0 1434.8 3139.3 2250.3 2168.9 2051.8 3772.6 2915.5 3860.8 True False 2249.0747953819387 2615.8896477671688 2497.149485672537 1786.3260644106206 2677.5131286055625 2488.425252371754 2562.9610553036614 2342.648933373968 2918.1121236042554 2256.8865250973113 2902.056807340701 0.7749933735593817 0.9013916065151869 0.8604757423617766 0.6155379384346097 0.9226260222862767 0.8574695181973443 0.8831533031402752 0.807237448780561 1.0055323921375152 0.7776851643250252 1.0 11.502860044889134 -8.765522556594298 24.995230977213673 1.002612531941894 0.8303102939048495 0.039752632773459085 0.10372247518985332 59.527030704111404 364394.8442529043 0.013038639542127414 0.014129313430802138 1.7158425895544093e-09 8.765522556594298 -0.17230223803704448 TAPAAPAEDAVAAAAAAPSEPS(ph)EPS(ph)RPSPQPKPRTP ddPTM_A549_PD325901_60min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPRTP 36 3 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 2 TAPAAPAEDAVAAAAAAPS(0.023)EPS(0.529)EPS(0.621)RPS(0.578)PQPKPRT(0.249)P 101.45 2.7933999999999997e-14 32869000.0 1375.5 1259.2 1150.7 1772.7 2137.2 1694.6 1871.8 1775.7 1664.2 1772.7 1356.8 True False 1515.1397474104183 1365.3172031627837 1228.793421721222 1882.1956529061965 1987.0904449397385 1680.799739442839 1943.0323732882628 1740.2822704902987 1594.2594614113918 1660.7714194691264 1189.9222014638426 1.2733099235786112 1.1474003943141577 1.0326670266422124 1.581780431183416 1.669933078393881 1.4125291026380704 1.6329070681242386 1.4625176909460156 1.339801425210937 1.3956974812521734 1.0 10.216651536152112 -10.197058140797193 0.8385877834581742 1.0195209916403467 1.3986471587565195 0.010100252022109735 0.21717813018182566 0.4972695156018019 0.6837992416810148 0.1017774037143893 0.04052159642787344 6.35245883167167e-11 10.197058140797193 0.37912616711617275 TAPAAPAEDAVAAAAAAPSEPS(ph)EPSRPSPQPKPR ddPTM_A549_PD325901_60min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPSEPS(0.489)EPS(0.342)RPS(0.169)PQPKPR 197.74 6.749199999999999e-89 523710000.0 3716.5 4181.9 3812.0 3961.2 4788.6 3624.5 3777.3 4682.1 4569.9 4571.0 4834.2 True False 4093.7963440573058 4534.323389379324 4070.7052434181746 4205.8743274620765 4452.265255773175 3594.983273699146 3921.047218517869 4588.711842463604 4377.842995255331 4282.386279908261 4239.624046518652 0.9656036240805144 1.0695107253914797 0.960157126847324 0.9920394547520578 1.050155675814966 0.8479485997469871 0.9248572928860566 1.082339328231616 1.0326016994007232 1.0100863267403917 1.0 12.049720622499903 -8.25265970356794 24.970090552249243 1.0208462147801816 0.9750241984325313 0.17639936281535396 0.05901201911279199 1079.9205146295017 3071379.686823822 0.009649575317712773 0.012351887857433394 5.589079619620394e-09 8.25265970356794 -0.04582201634765026 TAPAAPAEDAVAAAAAAPSEPSEPS(ph)RPSPQPKPR ddPTM_A549_MK2206_60min_R1 2 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.005)EPS(0.122)EPS(0.527)RPS(0.346)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.011)EPS(0.137)EPS(0.49)RPS(0.362)PQPKPR 156.9 2.0887999999999997e-51 411734000.0 3247.68 4028.4 3660.42 2934.71 4878.8 3802.9500000000003 3734.93 3905.0 5616.2 5532.2 5908.7 True False 3795.80898584733 4233.428353312415 4179.522597323034 3653.714081744137 4161.134982907278 4205.375644806096 4413.518435283006 4458.545708560941 4344.139667228497 4282.472177720237 4441.4067181760265 0.8546411591429692 0.9531728620996407 0.9410357714412289 0.8226479387243835 0.936895728526333 0.9468566856523191 0.9937208446191405 1.0038589103571116 0.978099945103097 0.9642152699491885 1.0 12.116800975631213 -7.401732675688738 2.0779849258199103 0.9908545429657325 0.9005841207475697 0.5618138208851836 0.036592752459354234 0.1707066144450423 1.4459719421591404 0.0053808442283406555 0.00929613593627677 3.965220331250091e-08 7.401732675688738 -0.09027042221816284 TAPAAPAEDAVAAAAAAPSEPSEPS(ph)RPSPQPKPR ddPTM_A549_PD325901_60min_R1 3 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPSEPS(0.035)EPS(0.564)RPS(0.401)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.005)EPS(0.099)EPS(0.525)RPS(0.371)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.031)EPS(0.351)EPS(0.395)RPS(0.223)PQPKPR 243.18 8.449899999999997e-132 529978200.0 5683.1 4991.9 5185.8 6047.4 6586.8 5947.8 6202.1 5913.800000000001 5995.2 5831.2 6909.5 True False 6260.044128322902 5412.584932074572 5537.739572748684 6420.934163358109 6124.165891226402 5899.363088786808 6438.124309419348 5795.84461971365 5743.2425928695975 5463.01703684118 6059.675302929258 1.0330659342913615 0.8932136890994999 0.9138673767011462 1.059616867632201 1.0106425815036606 0.973544421750625 1.062453677395412 0.9564612508052912 0.9477805832423569 0.90153626452565 1.0 12.565024776148471 TAPAAPAEDAVAAAAAAPSEPSEPS(ph)RPSPQPKPRTP ddPTM_A549_MK2206_60min_R1 2 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPRTP 36 3 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.007)EPS(0.092)EPS(0.371)RPS(0.295)PQPKPRT(0.235)P;TAPAAPAEDAVAAAAAAPS(0.005)EPS(0.104)EPS(0.481)RPS(0.363)PQPKPRT(0.046)P 148.2 3.3404999999999997e-40 84375000.0 4135.4 4837.9 4996.9 3904.6 5043.5 4070.8 4342.5 3788.5 6272.6 6606.200000000001 7477.1 True False 4833.354419177091 5084.128445658358 5705.535557822178 4861.227175284155 4301.607831084052 4501.569354021657 5131.476039769541 4325.531476794658 4851.866115283903 5113.854831794842 5620.329712538116 0.8599770238380497 0.9045961190348721 1.015160293015191 0.8649362980323884 0.7653657438437833 0.8009439987087107 0.9130204636076749 0.7696223705781965 0.8632707267084553 0.9098852012874966 1.0 12.456439052241889 -10.489381592601003 0.8990707420963862 0.9968956210444391 0.8630867881896506 0.16373033074993026 0.07175361566563962 0.5120816650785303 0.767868376213746 0.04197684377342398 0.013264501241884339 3.2405476169038365e-11 10.489381592601003 -0.1338088328547885 TAPAAPAEDAVAAAAAAPSEPSEPS(ph)RPSPQPKPRTP ddPTM_A549_PD325901_60min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPRTP 36 3 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.164)EPS(0.232)EPS(0.494)RPS(0.07)PQPKPRT(0.039)P 172.03 6.9942e-64 96295000.0 4275.9 4598.3 5003.0 6407.2 5160.6 6704.7 6487.6 5877.3 6107.9 6301.1 6217.1 True False 4709.986220248787 4985.814878735255 5342.533665482987 6802.958192193024 4798.137259103505 6650.099146136196 6734.489168150937 5760.072640847347 5851.206203794405 5903.247470647548 5452.436113444028 0.8638315281925838 0.9144196786536886 0.9798434230728436 1.2476914998451838 0.8799988040708586 1.2196564999155333 1.2351339892907247 1.0564218490602362 1.0731361325568094 1.0826807224924577 1.0 12.41268524547356 -5.899927661397877 3.7077604706796587 1.065961091582769 0.8884728773160325 0.34243179339867036 0.10745280845155644 0.21386161651600766 5.590806380471395 0.014811012342300459 0.05193739188921109 1.2591351231609117e-06 5.899927661397877 -0.17748821426673655 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPK ddPTM_A549_MK2206_60min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPK 32 1 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.002)EPS(0.002)EPS(0.047)RPS(0.949)PQPK 209.19 5.773699999999999e-101 29706000.0 2698.4 3358.1 3245.9 2575.4 4427.8 3831.6 3400.7 4633.7 4434.7 4377.0 5081.1 True False 3153.8239504539965 3529.0129463951994 3706.217428232506 3206.373115614098 3776.4764854711916 4237.057368789767 4018.5631706262025 5290.541165111099 3430.247530760693 3388.232660041478 3819.3226387740474 0.8257547865781595 0.9239892201220179 0.9703860550053329 0.8395135522363991 0.9887817402835052 1.1093740355357375 1.0521664574313387 1.385204044141527 0.8981298138933236 0.8871292060125762 1.0 11.899101081998374 -6.889967326179241 7.166733515598716 1.0067617512109974 0.8985455287469736 0.20656608036581658 0.13368833553788134 0.3979343915163269 23.87790255480946 0.02058605822885156 0.03910012863212757 1.2883464758312926e-07 6.889967326179241 -0.10821622246402385 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPK ddPTM_A549_PD325901_60min_R1 2 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPK 32 1 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.001)EPS(0.032)EPS(0.028)RPS(0.939)PQPK;TAPAAPAEDAVAAAAAAPS(0.001)EPS(0.003)EPS(0.049)RPS(0.947)PQPK 189.64 1.0217999999999998e-76 110594000.0 4690.7 4341.9 3988.3999999999996 4026.2999999999997 5933.0 4133.2 4457.4 3732.9 5312.2 5122.4 5095.6 True False 5166.89641088917 4707.807150899373 4259.076808197547 4274.995406609249 5516.286547738852 4099.540589558093 4627.028796182868 3658.444381096602 5088.946707673115 4798.970789805749 4468.873503669779 1.1561966134521784 1.0534661916550971 0.95305378518771 0.9566158905815257 1.2343796581418005 0.9173543592566685 1.0353904160373333 0.8186502433090433 1.1387538052921258 1.0738658827252323 1.0 12.125695492919032 -11.499692687677936 2.5498445640788843 0.999124161180309 1.047713413116138 0.0 0.11561613557211307 1.25696556959816 14.839342578855845 0.09619172721490162 0.016286100242584742 3.1645161201163314e-12 11.499692687677936 0.04858925193582908 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPKPR ddPTM_A549_MK2206_60min_R1 2 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPSEPS(0.004)EPS(0.214)RPS(0.782)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.003)EPS(0.069)EPS(0.066)RPS(0.862)PQPKPR 178.14 7.193399999999999e-64 355745000.0 3293.91 3953.6800000000003 3221.17 3219.63 4585.7 3229.54 3511.63 3056.0499999999997 5288.799999999999 5493.7 5606.0 True False 3849.841479632348 4154.90542446734 3677.980342370285 4008.439494534682 3911.149604640057 3571.2877792048475 4149.64771572502 3489.2544462606065 4090.8952444781316 4252.6693544596465 4213.875482271026 0.913610640805531 0.9860057426822909 0.8728260618626714 0.9512477317849871 0.9281597477418061 0.8475067178017651 0.9847580293209349 0.8280392861490316 0.9708154077380057 1.0092062217670734 1.0 12.04093196859324 -8.977487123149917 23.448004965307174 0.9871245858145947 0.9158068821012961 0.3479004859725 0.048583948453571 62.6241223728456 65226.64707098339 0.007757532033420843 0.007982968769850348 1.0532049142378146e-09 8.977487123149917 -0.0713177037132986 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPKPR ddPTM_A549_PD325901_60min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPSEPS(0.002)EPS(0.047)RPS(0.951)PQPKPR 216.54 1.4375999999999996e-101 25477000.0 2007.7 2036.0 2477.4 2359.7 2889.8 2613.3 2155.9 3061.3 2908.8 2494.2 2259.3 True False 2211.520226009377 2207.5808653426216 2645.5312618164194 2505.4533097324697 2686.8304172687913 2592.018151236855 2237.9439542537466 3000.239969956611 2786.5532516244784 2336.715786337165 1981.4204228827086 1.1161287127503727 1.1141405629254992 1.3351690692516007 1.2644733448781968 1.3560122759610012 1.3081616204731583 1.1294644631742665 1.514186457002221 1.4063412385597633 1.1793134659112616 1.0 10.952319312115426 -10.920716118113074 1.2102155227335234 1.0020287596380713 1.2941267571355557 0.20635805261066686 0.1301180005862442 0.36015426993726274 0.9476081220931037 0.0857033196065913 0.020861083583461296 1.2002836268174234e-11 10.920716118113074 0.29209799749748444 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPKPRT(ph)P ddPTM_A549_PD325901_60min_R1 1 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPRTP 36 3 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 2 TAPAAPAEDAVAAAAAAPS(0.01)EPS(0.431)EPS(0.287)RPS(0.568)PQPKPRT(0.704)P 123.66 2.0580000000000003e-20 35578000.0 1811.0 1680.6 1644.7 1657.5 1431.3 1911.0 1848.5 2228.2 2368.2 1679.8 1747.2 True False 1994.8513868122639 1822.2300600662127 1756.3192323845424 1759.8800105443772 1330.7704257169416 1895.4374495900302 1918.8456790380135 2183.7568030109146 2268.6727896373377 1573.7371413235376 1532.305476413345 1.3018627274514454 1.1892080842336292 1.1461939276596103 1.1485177320280249 0.8684759313344393 1.2369840601409747 1.2522605371935627 1.425144552848833 1.48056169253379 1.027038776241387 1.0 10.581488222508765 -7.488446044039113 24.95766664981415 1.2521025512597084 1.1276077559387725 0.09005474517613299 0.1647140521217985 1316.2255070876574 954033.5419588581 0.03068565061427367 0.0490388072275242 3.2475358645977216e-08 7.488446044039113 -0.12449479532093588 TAPCISES(ph)PRK ddPTM_A549_MK2206_60min_R1 2 TAPCISESPRK 11 1 Q86XJ1;G3V1N3;H0YIT6 Q86XJ1 GAS2L3 GAS2-like protein 3 1 TAPCIS(0.002)ES(0.998)PRK;TAPCIS(0.002)ES(0.998)PRK 100.22 0.00011339 19212300.0 3815.0 3737.6 4001.0 3392.3 5229.6 3759.3999999999996 3580.2 3671.7 5466.1 5010.9 5644.0 True False 4458.878732205008 3927.8278754196403 4568.401962586111 4223.413652286134 4460.332767609228 4157.217212712246 4230.675997140567 4192.174719109659 4228.037077568053 3878.934209778808 4242.439033524379 1.0510177511026773 0.9258419141398062 1.0768338511139288 0.9955154614862102 1.051360486824447 0.9799120694160369 0.9972272939479252 0.9881520243384705 0.9966052650745197 0.9143170188485675 1.0 12.05067821215801 -7.31247638050972 24.998382672203807 0.9962530918036189 1.0166612819025989 0.11246747006464064 0.04447852968259811 726.1301120274438 355662.0472842441 0.00491715857045108 0.007860621778711835 4.869940100464764e-08 7.31247638050972 0.020408190098979984 TAPCISES(ph)PRK ddPTM_A549_PD325901_60min_R1 2 TAPCISESPRK 11 1 Q86XJ1;G3V1N3;H0YIT6 Q86XJ1 GAS2L3 GAS2-like protein 3 1 TAPCISES(1)PRK;TAPCIS(0.016)ES(0.984)PRK 120.84 4.7447000000000005e-06 27266000.0 6732.2 7297.799999999999 8065.4 6730.3 6721.700000000001 7038.799999999999 6852.7 7409.0 5952.5 6904.299999999999 7813.8 True False 7415.647988016298 7912.81121763133 8612.76654519018 7146.01534537968 6249.590980606142 6981.478346506703 7113.4832484413255 7261.221682751943 5702.3371253763435 6468.361319704789 6852.75213575927 1.0821415748163 1.1546910001808504 1.2568332218302105 1.042794953590995 0.9119826394995828 1.0187846004345773 1.0380476496912094 1.0596066425431008 0.8321236508205527 0.9439070889418809 1.0 12.742467790284106 -6.510687185289921 4.805869141111406 0.9463135924498071 1.1633063850271144 0.552280458154119 0.07339121571757386 0.11204023980645884 6.995302942681248 0.012810813800951691 0.029014519137674968 3.0854095165196406e-07 6.510687185289921 0.2169927925773073 TAPPALPTGYDS(ph)EEEEESRPMSYDEK ddPTM_A549_MK2206_60min_R1 4 TAPPALPTGYDSEEEEESRPMSYDEK 26 1 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHN8;A0A140T9I1 P25440-2 BRD2 Bromodomain-containing protein 2 1 T(0.002)APPALPT(0.13)GY(0.114)DS(0.752)EEEEES(0.001)RPMS(0.001)Y(0.001)DEK;TAPPALPT(0.079)GYDS(0.921)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK 270.74 1.3718999999999996e-138 211752000.0 17665.8 18695.800000000003 18380.5 15924.8 24518.4 18656.8 18915.8 17915.8 25947.6 23669.699999999997 27968.399999999998 True False 20647.355152657212 19647.33636378172 20987.13128550712 19826.376714891427 20911.775839328086 20631.050192618455 22352.556009918873 20455.41951483641 20070.510029802732 18322.698330679414 21023.074391428643 0.9821282448144398 0.9345605689238379 0.9982903021103241 0.9430769423036849 0.9947058860170359 0.9813526703320794 1.063239162538105 0.9729984841406605 0.9546895785131083 0.8715518001567741 1.0 14.359686042424105 -5.774277388450777 24.999696251711583 0.9833462642926329 0.9583443956502616 0.0 0.04592069121950827 391.1664919955608 761730.834004261 0.004451445005292955 0.013963645388853387 1.68159966261117e-06 5.774277388450777 -0.025001868642371305 TAPPALPTGYDS(ph)EEEEESRPMSYDEK ddPTM_A549_PD325901_60min_R1 4 TAPPALPTGYDSEEEEESRPMSYDEK 26 1 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHN8;A0A140T9I1 P25440-2 BRD2 Bromodomain-containing protein 2 1 TAPPALPT(0.047)GYDS(0.953)EEEEESRPMSYDEK;TAPPALPT(0.048)GY(0.003)DS(0.914)EEEEES(0.019)RPMS(0.015)Y(0.001)DEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPT(0.002)GYDS(0.998)EEEEESRPMSYDEK 277.3 1.4704999999999993e-153 417752000.0 21076.199999999997 21774.5 21246.899999999998 20915.800000000003 26290.3 21718.0 22091.5 23581.3 24456.8 25445.4 25641.7 True False 23215.84030852159 23609.513532614394 22688.842401988903 22207.72146277171 24443.760024611274 21541.13580857995 22932.204121432635 23110.952472328026 23428.96574681297 23838.77310146086 22487.933456128703 1.0323687747392596 1.0498747507712862 1.0089340777467235 0.9875394511503847 1.0869722676962807 0.9578975253819635 1.0197559578415976 1.0277045917720613 1.0418460990432985 1.0600695323101825 1.0 14.456863469318836 -5.760466580295629 24.999988585644566 1.0183251863767646 1.041121764696332 0.044829515833796796 0.03340490635828587 49.76246250485573 1278616.2929474243 0.004097715083415673 0.014222937862382509 1.735934840891685e-06 5.760466580295629 0.022796578319567384 TAPPALPTGYDS(ph)EEEEESRPMSYDEKR ddPTM_A549_MK2206_60min_R1 4 TAPPALPTGYDSEEEEESRPMSYDEKR 27 2 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHN8;A0A140T9I1 P25440-2 BRD2 Bromodomain-containing protein 2 1 TAPPALPT(0.024)GY(0.003)DS(0.936)EEEEES(0.031)RPMS(0.007)YDEKR;TAPPALPTGYDS(0.996)EEEEES(0.002)RPMS(0.002)YDEKR;TAPPALPTGYDS(0.999)EEEEESRPMSYDEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR 166.19 1.8783e-42 97231000.0 9207.4 10175.0 9530.1 8457.199999999999 13216.1 10082.3 8583.8 8693.0 15765.0 14382.2 16914.0 True False 10761.384020682672 10692.86403906112 10881.611483039715 10529.214379658139 11272.029197261807 11149.20229391091 10143.365349493093 9925.259371195976 12194.252671531865 11133.25103112829 12713.786997347854 0.846434191710742 0.8410447682733472 0.8558906551847739 0.8281729418508093 0.8865988709432678 0.8769379490341216 0.797824074888862 0.7806689991948446 0.959136146773234 0.8756833061188402 1.0 13.634106202852323 -8.880758883114655 5.871984628284964 0.9821734926477323 0.8411434881667167 0.4941703233905812 0.04378489204351094 0.0650315330203389 3.0935347409216156 0.005773598078527752 0.006116354862374009 1.31595523742798e-09 8.880758883114655 -0.14103000448101566 TAPPALPTGYDS(ph)EEEEESRPMSYDEKR ddPTM_A549_PD325901_60min_R1 4 TAPPALPTGYDSEEEEESRPMSYDEKR 27 2 P25440-2;P25440;A0A0G2JK44;A0A140T9E9;H0Y6K2;P25440-3;P25440-4;A0A0G2JHN8;A0A140T9I1 P25440-2 BRD2 Bromodomain-containing protein 2 1 TAPPALPTGYDS(1)EEEEESRPMSYDEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR 186.17 2.8781e-58 187626000.0 8453.6 8407.599999999999 7828.7 9250.199999999999 9727.4 10513.1 9060.5 10627.2 9431.9 10924.7 12254.699999999999 True False 9311.803248788596 9116.137958474763 8360.002659797445 9821.56384527155 9044.180981708221 10427.484799207192 9405.302285595837 10415.232159122881 9035.510043315777 10234.912577579036 10747.449588943806 0.866419811670287 0.8482140700480961 0.7778592112120821 0.913850654891674 0.8415188093566139 0.9702287703618754 0.8751194604598405 0.9690887194146334 0.8407120190273656 0.9523108243380801 1.0 13.391706722906129 -14.999999999999861 0.2726667960408725 1.909797009085402 0.8633061942519372 0.3235702781985461 0.05474334659054504 31.71685310090031 0.41586332117958985 15.76407582865732 0.02327639679898156 1.000000000000319e-15 14.999999999999861 -1.0464908148334646 TAPPAS(ph)PEAR ddPTM_A549_MK2206_60min_R1 4 TAPPASPEAR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPPAS(1)PEAR;TAPPAS(1)PEAR;TAPPAS(1)PEAR;TAPPAS(1)PEAR 190.57 1.8596000000000002e-14 588537000.0 21159.4 23455.699999999997 22513.399999999998 19595.699999999997 27247.5 19999.2 18939.4 19269.5 29766.0 31252.000000000004 32425.8 True False 24730.58942233781 24649.494942605023 25706.13865145867 24396.6473796844 23239.428844544986 22115.502069605453 22380.44382443551 22001.01063536878 23024.04852653457 24192.151494543345 24373.57895344699 1.0146474372751206 1.0113202902899499 1.0546723031753704 1.0009464521513836 0.9534680519808679 0.9073555472442345 0.9182255862867605 0.9026581889098123 0.944631421200391 0.9925563882411291 1.0 14.573030487782855 -6.61662256112582 4.038588491147597 0.9573077077597087 1.0257572047651522 0.5449492718278137 0.0322931402030965 0.1810673110714906 5.541046615103581 0.005735361408772688 0.012432868930320487 2.4175609880005867e-07 6.61662256112582 0.06844949700544345 TAPPAS(ph)PEAR ddPTM_A549_PD325901_60min_R1 2 TAPPASPEAR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPPAS(1)PEAR;TAPPAS(1)PEAR 132.17 1.0249e-06 622900000.0 18324.8 17590.5 16165.1 18635.2 20584.5 18408.8 18334.6 19801.6 20038.9 21077.0 20677.0 True False 20185.120205995234 19072.913168865114 17262.160894643017 19786.253980390105 19138.715732669887 18258.884836218185 19032.333236078077 19406.641553945316 19196.734720151875 19746.194622976687 18133.860082302377 1.1131176767871265 1.0517845115326108 0.9519297499979009 1.0911220165253381 1.0554132239802707 1.0068945471812605 1.0495467125972016 1.0701881158157331 1.0586127075551224 1.0889129249567695 1.0 14.146398438047735 -10.786032607184191 1.0217743292853039 0.9998529742385672 1.04818449777783 0.0 0.04785462638929997 0.7830822374903204 1.4449616391311084 0.027301262820566247 0.006790344511072079 1.6366936325206962e-11 10.786032607184191 0.048331523539262844 TAPQT(ph)PVLQK ddPTM_A549_MK2206_60min_R1 1 TAPQTPVLQK 10 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form 1 T(0.002)APQT(0.998)PVLQK 109.16 0.000234 6187200.0 6532.9 6229.1 5201.3 5110.5 6696.7 5341.8 5604.4 4933.4 7845.3 7254.6 8555.6 True False 7635.4938059297765 6546.1345833627165 5938.922551361949 6362.572729419063 5711.624301064847 5907.06573040014 6622.646935471367 5632.724557903855 6068.352076369741 5615.780821461482 6431.008397452368 1.1872933969351624 1.0179017315474126 0.9234823194624723 0.9893584856675952 0.8881382122479418 0.9185286918207436 1.0297991428676903 0.8758695697140201 0.9436081717407969 0.8732348761488422 1.0 12.650829257975648 -5.307442970096553 2.860329599630346 0.9594171898505679 1.2157843207445354 0.6405143173861902 0.0526275614027006 0.16008982030655358 1.9232488064802196 0.006427012926236929 0.08968437379523424 4.926710347928309e-06 5.307442970096553 0.25636713089396745 TAPQT(ph)PVLQK ddPTM_A549_PD325901_60min_R1 2 TAPQTPVLQK 10 0 Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 Q15746-4 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form 1 T(0.001)APQT(0.999)PVLQK;T(0.001)APQT(0.999)PVLQK 154.36 1.8566e-08 22211000.0 11102.6 11811.5 13103.8 12944.2 15071.099999999999 13278.7 13260.2 14330.900000000001 12867.5 13873.099999999999 15535.9 True False 12229.727778697874 12806.89655746285 13993.102667550651 13743.73383558886 14012.557928472437 13170.562669738956 13764.824167259869 14045.058957126445 12326.723722936606 12997.150098401948 13625.082790184337 0.8975892452931228 0.9399499991801211 1.027010469076301 1.008708280693164 1.028438369458367 0.9666409278061179 1.0102561855386452 1.0308237515624246 0.9047081704205803 0.9539134769709613 1.0 13.733977375723454 -8.751558680032561 24.995598914080745 0.9550010780652174 0.9903085225269856 0.1141804749784181 0.044135465680039614 386.4776650839986 977687.4401932089 0.008757049641261342 0.009870474758518755 1.7719086161662575e-09 8.751558680032561 0.035307444461768256 TAPRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TAPRSPR 7 1 O75419-3 O75419-3 1 TAPRS(1)PR;T(0.001)APRS(0.999)PR 60.478 0.015826 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TAPRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 TAPRSPR 7 1 O75419-3 O75419-3 1 T(0.001)APRS(0.999)PR 60.478 0.015826 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TAPS(ph)PLVEAK ddPTM_A549_MK2206_60min_R1 2 TAPSPLVEAK 10 0 Q8TEH3;A0A0A0MS48;Q8TEH3-5;Q8TEH3-2;Q8TEH3-4;Q8TEH3-3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 T(0.045)APS(0.955)PLVEAK;T(0.026)APS(0.974)PLVEAK 160.52 9.3788e-09 65159000.0 10897.6 11407.5 10272.5 10398.3 15029.0 11606.5 12795.0 13069.6 17322.7 16302.8 16349.5 True False 12736.848459260116 11988.09302462799 11729.294966424857 12945.88396679742 12818.25400879591 12834.692126228843 15119.685878837367 14922.25582397134 13399.136108667613 12619.986157213669 12289.467926755287 1.0364035721620495 0.9754769772032866 0.9544184529656583 1.0534128933778375 1.0430275814373873 1.0443651590714154 1.2302962153406527 1.214231235469864 1.0902942412581165 1.0268944296391231 1.0 13.585134835044535 -6.420394978193539 4.41919116382315 1.070729747055513 0.9877771418214643 0.24780070141323451 0.07294793361217664 0.3366620770236759 10.992918782241514 0.012107960776872255 0.028885184728682338 3.798437823146915e-07 6.420394978193539 -0.08295260523404879 TAPS(ph)PLVEAK ddPTM_A549_PD325901_60min_R1 4 TAPSPLVEAK 10 0 Q8TEH3;A0A0A0MS48;Q8TEH3-5;Q8TEH3-2;Q8TEH3-4;Q8TEH3-3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 T(0.042)APS(0.958)PLVEAK;T(0.001)APS(0.999)PLVEAK;T(0.004)APS(0.996)PLVEAK;T(0.063)APS(0.937)PLVEAK 178.71 3.9554000000000004e-11 102396000.0 28822.9 28468.800000000003 28242.8 27467.6 34125.1 28963.199999999997 28319.700000000004 29972.199999999997 32331.8 29953.200000000004 31897.6 True False 31748.97958970247 30867.965687262287 30159.526245753117 29164.211268554303 31728.270701203965 28727.333301918337 29397.42168063446 29374.380958263962 30973.006882863156 28061.94984015492 27974.39741554617 1.1349298831387395 1.1034363038722 1.078111739021503 1.0425322424406154 1.1341896030822691 1.026915178017516 1.0508688085019295 1.0500451724454227 1.107191208545946 1.0031297340674834 1.0 14.771819434612913 -10.917732736719088 1.036185344930144 0.9974206298067227 1.0809132036007796 0.43698171285239684 0.034691887330807344 0.445642160069026 0.8051123292866591 0.0285774820361343 0.005955078450460273 1.2085573482031707e-11 10.917732736719088 0.08349257379405683 TAPS(ph)PLVEAKDPK ddPTM_A549_MK2206_60min_R1 1 TAPSPLVEAKDPK 13 1 Q8TEH3;A0A0A0MS48;Q8TEH3-5;Q8TEH3-2;Q8TEH3-4;Q8TEH3-3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 T(0.127)APS(0.873)PLVEAKDPK 59.872 0.0023577 7967400.0 1968.9 2993.7 2880.3 2310.1 3320.1 2170.8 2464.9 2022.5 4592.1 4365.9 4924.4 True False 2301.2021850166293 3146.066542873444 3288.769850746508 2876.074603704328 2831.717688109874 2400.5126151395816 2912.740423817604 2309.1955686464794 3551.996682076846 3379.6401577507636 3701.5355734740315 0.6216885234083712 0.8499355147141654 0.8884879762643677 0.7769949921094567 0.7650116098849753 0.6485180454139495 0.7869005622128566 0.6238480011362452 0.959600849855716 0.9130373302285578 1.0 11.85390817828286 -8.864044358144236 7.5380328106694865 0.9821055431689342 0.7535905745023844 0.5470359224240327 0.08517161438202366 0.10910610891672703 7.170307397147768 0.014296584904941208 0.015186796986888261 1.367589135093688e-09 8.864044358144236 -0.22851496866654974 TAPS(ph)PLVEAKDPK ddPTM_A549_PD325901_60min_R1 2 TAPSPLVEAKDPK 13 1 Q8TEH3;A0A0A0MS48;Q8TEH3-5;Q8TEH3-2;Q8TEH3-4;Q8TEH3-3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 T(0.007)APS(0.993)PLVEAKDPK;T(0.007)APS(0.993)PLVEAKDPK 103.04 3.5365e-05 24501000.0 5359.2 5566.200000000001 6727.7 6772.599999999999 6772.4 8801.7 8161.7 8293.099999999999 7921.0 8413.0 7844.8 True False 5903.26203876548 6035.283208580599 7184.282178946603 7190.928120309409 6296.729987511642 8730.021873394335 8472.29795975361 8127.687614688903 7588.107916019492 7881.801744228439 6879.939332284457 0.8580398392561588 0.8772291319866344 1.0442362689499314 1.0452022573172441 0.9152304523913349 1.268909717332575 1.231449515840486 1.1813603612097747 1.10293238784998 1.1456208207015275 1.0 12.748180127874598 -5.7029510695349614 1.1105469771089143 1.0822039472766816 0.8053877155327019 0.44857957386880265 0.09916061288833913 0.7785676956513456 1.2205991028055048 0.016388841716156073 0.2086284788790957 1.9817502902144163e-06 5.7029510695349614 -0.2768162317439796 TAPSS(ph)PLTSPSDTR ddPTM_A549_MK2206_60min_R1 2 TAPSSPLTSPSDTR 14 0 Q8IWB9;A0A087WVA8;Q8IWB9-2 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 TAPS(0.018)S(0.978)PLT(0.004)SPSDTR;TAPS(0.004)S(0.99)PLT(0.007)SPSDTR 228.17 3.8025e-47 37810000.0 4749.4 4665.0 4500.5 3930.1 5662.6 4437.5 4606.7 4052.2 6616.0 6828.4 6700.5 True False 5550.982608318344 4902.42857417397 5138.738573511323 4892.974676428894 4829.639041200861 4907.073304625894 5443.677759909349 4626.611759342034 5117.486563581025 5285.859697470238 5036.580925607743 1.1021331117892306 0.973364400688631 1.0202831344144943 0.9714873539609571 0.9589122288585266 0.9742865997996007 1.0808280141458233 0.9186016918379526 1.0160636032992003 1.0494936496691782 1.0 12.298228979585158 -5.252587129952704 24.3374000043597 0.998544283611252 1.1021331897810998 0.3354361572751301 0.042708453293951974 629.4056664214856 1730363.6863684764 0.0049797969444052475 0.08161744351266778 5.590013671567997e-06 5.252587129952704 0.10358890616984773 TAPSS(ph)PLTSPSDTR ddPTM_A549_PD325901_60min_R1 2 TAPSSPLTSPSDTR 14 0 Q8IWB9;A0A087WVA8;Q8IWB9-2 Q8IWB9 TEX2 Testis-expressed sequence 2 protein 1 TAPS(0.043)S(0.957)PLTSPSDTR;TAPS(0.075)S(0.924)PLT(0.001)SPSDTR 219.97 3.5441e-39 42856000.0 9109.6 8969.900000000001 8307.8 10266.3 10174.1 10696.4 10010.3 10473.900000000001 9664.5 10943.0 11714.5 True False 10034.399885866918 9725.824952866791 8871.617266859788 10900.42603454102 9459.506314739565 10609.292064780124 10391.247444346342 10264.9898478844 9258.334674204065 10252.057112455937 10273.690764333865 0.9767083822205678 0.9466729314679156 0.8635277691692342 1.061003906442554 0.9207505395801067 1.0326660893484678 1.01144249741491 0.9991530875661869 0.9011692960766632 0.9978942667855031 1.0 13.326666934220409 -4.8432069062621625 14.182302732686404 0.9627063323326628 3.321338504058601 0.0 0.05762726751879066 1836326.489128653 949202.4554793247 1.2530084619352062 139797001.0043609 1.4348057014031599e-05 4.8432069062621625 2.3586321717259384 TAPTALGITLSS(ph)SPTSTPELR ddPTM_A549_MK2206_60min_R1 1 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGITLS(0.073)S(0.541)S(0.386)PTSTPELR 222.7 1.3239e-75 36664000.0 966.91 893.84 752.84 874.3 1506.5 822.64 1036.0 1121.8 1326.6 1476.9 1855.8 True False 1130.1007693201434 939.3326381006777 859.6040323702398 1088.5035392488185 1284.8958456484818 909.6912187757625 1224.2277897987904 1280.8185853684156 1026.1272181448883 1143.2672642484022 1394.953642525609 0.8101350000950993 0.673379106993108 0.6162240852777722 0.7803152062301134 0.92110290010938 0.6521300715977464 0.8776118090793943 0.9181800357533401 0.7355995115988597 0.8195736613716278 1.0 10.446001463483803 -14.9999999999964 0.2130954725635019 2.1510945977516074 0.73248037102978 0.13760703861856372 0.10892894716492206 32.4039460457909 0.39301131399433253 15.670751159920437 0.07230397557769723 1.0000000000082908e-15 14.9999999999964 -1.4186142267218274 TAPTALGITLSS(ph)SPTSTPELR ddPTM_A549_PD325901_60min_R1 2 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGIT(0.003)LS(0.021)S(0.38)S(0.283)PT(0.076)S(0.101)T(0.135)PELR;TAPTALGITLSS(0.5)S(0.5)PTSTPELR 202.41 9.9611e-56 31219200.0 2135.63 1798.7 2188.94 2164.1 2345.2200000000003 2528.73 2303.44 2419.03 2783.36 2248.25 2454.34 True False 2352.437585432288 1950.2827615381996 2337.4946315655247 2297.7715419723 2180.4998377697802 2508.1368612777596 2391.0986696907316 2370.780548957677 2666.3850585951295 2106.295111311255 2152.471739343137 1.0929005674890644 0.9060666051454693 1.085958337496617 1.067503698177939 1.0130213548983442 1.1652356755416264 1.110861818060578 1.1014223813601198 1.238754967072795 0.9785471617639108 1.0 11.07177858069203 -7.2486459395955904 24.35382173002819 1.1175506926652226 1.0308822367908659 0.1166121329904729 0.08231209082318164 805.3005894537049 1532983.2115111412 0.013918720906450086 0.02399664978097456 5.640973511561529e-08 7.2486459395955904 -0.08666845587435668 TAPTALGITLSSS(ph)PTSTPELR ddPTM_A549_MK2206_60min_R1 3 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGITLSS(0.116)S(0.884)PT(0.001)STPELR;TAPTALGITLS(0.045)S(0.142)S(0.808)PT(0.003)S(0.001)T(0.001)PELR;TAPTALGITLS(0.072)S(0.165)S(0.73)PT(0.026)S(0.006)T(0.001)PELR 237.59 6.0236e-86 36386200.0 1937.07 1798.08 2069.08 1604.26 2435.59 1654.01 1913.95 1776.56 2622.98 2299.92 2667.67 True False 2264.000059185416 1889.5945917793642 2362.5066565227876 1997.3037720179677 2077.317937406564 1829.0362403570216 2261.6899404299165 2028.392820486818 2028.879218038354 1780.3664746361878 2005.2139150535036 1.1290566269210272 0.9423406538294173 1.1781818581982815 0.9960552123760199 1.0359582694952207 0.9121402093941777 1.1279045709043813 1.0115593180654225 1.011801884480848 0.8878686015844268 1.0 10.969540435419532 TAPTALGITLSSS(ph)PTSTPELR ddPTM_A549_PD325901_60min_R1 5 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGITLSS(0.015)S(0.983)PT(0.001)STPELR;TAPTALGITLS(0.006)S(0.168)S(0.819)PT(0.006)S(0.001)TPELR;TAPTALGITLS(0.003)S(0.189)S(0.806)PT(0.002)STPELR;TAPTALGITLSS(0.116)S(0.883)PT(0.001)STPELR;TAPTALGITLS(0.046)S(0.198)S(0.75)PT(0.004)S(0.001)TPELR 244.86 1.8589999999999998e-86 85065500.0 6132.16 6408.360000000001 6974.060000000001 8244.35 7673.52 7902.39 7647.46 7300.1 7727.8099999999995 7537.87 9128.25 True False 6754.692368942404 6948.4149873413735 7447.361650029635 8753.584775222655 7134.558427406883 7838.035555869052 7938.488275150688 7154.4937786823375 7403.03701988317 7061.927601779061 8005.533118744343 0.8437529729440265 0.8679515635344999 0.9302767897608478 1.093441828967868 0.8912034116381158 0.9790772756303877 0.9916251869052076 0.8936936082283687 0.9247400404289785 0.8821308333912327 1.0 12.96678176512486 -5.81010269016408 3.80666377709991 0.964641747533657 0.8525319935336266 0.29298084028045024 0.058821696722435944 0.16418141890122076 4.830487307927979 0.007396828673692366 0.027631822640411037 1.5484504401164531e-06 5.81010269016408 -0.11210975400003031 TAPTLS(ph)PEHWK ddPTM_A549_MK2206_60min_R1 4 TAPTLSPEHWK 11 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPT(0.002)LS(0.998)PEHWK;TAPT(0.229)LS(0.77)PEHWK;TAPTLS(1)PEHWK;TAPT(0.012)LS(0.988)PEHWK 168.31 1.6929000000000002e-15 263128000.0 11742.6 12196.04 9536.3 9541.02 17813.6 13232.9 12335.9 12294.7 19714.6 18971.2 19990.300000000003 True False 13724.463800993592 12816.766342501334 10888.690736268412 11878.570328312664 15193.243037533235 14633.196694711894 14577.173351524016 14037.51137593962 15249.274577747037 14685.592743929374 15026.156805787099 0.9133715279550271 0.8529637024395452 0.7246490820643371 0.7905261792381809 1.011119691741922 0.9738482623232135 0.9701198742921301 0.9342050370812904 1.0148486252901345 0.977335251704111 1.0 13.87518844228151 -6.763487712717534 24.99999711037111 0.996410142432578 0.8158674302734612 0.7187124209619711 0.0484758071284479 19.998866988737635 244092.04464038886 0.007185694280818581 0.014075678799792102 1.7239008638253622e-07 6.763487712717534 -0.18054271215911677 TAPTLS(ph)PEHWK ddPTM_A549_PD325901_60min_R1 5 TAPTLSPEHWK 11 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPT(0.008)LS(0.992)PEHWK;TAPTLS(1)PEHWK;TAPT(0.001)LS(0.999)PEHWK;TAPT(0.002)LS(0.998)PEHWK;TAPT(0.002)LS(0.998)PEHWK 183.89 4.0883999999999997e-19 311306000.0 21738.4 17339.5 16843.8 19812.2 16930.0 20657.4 16815.1 15670.8 24874.899999999998 23015.7 27581.4 True False 23945.266365035746 18800.760517980554 17986.921557997666 21035.95459722915 15740.895205329296 20489.172983339136 17455.007832075782 15358.233600495223 23829.49445779489 21562.484774116052 24189.06265290008 0.989921218057819 0.7772422101575932 0.7435972950295854 0.8696473649716684 0.650744323217588 0.8470428671564354 0.7216074505467893 0.63492471043122 0.985135091827873 0.8914146481625189 1.0 14.562067244269775 -8.834406942717505 10.496497377233338 0.9932081511862045 0.7771971690423434 0.37850955344784376 0.09981190943146726 0.23020792160223497 31.755051828685854 0.0155421751418069 0.016535580473621497 1.464175236153198e-09 8.834406942717505 -0.21601098214386116 TAPVQAPPAPVIVT(ph)ETPEPAMTSGVYRPPGAR ddPTM_A549_PD325901_60min_R1 1 TAPVQAPPAPVIVTETPEPAMTSGVYRPPGAR 32 1 H0Y8K3;Q9UKY7-2;Q9UKY7;D6RFH2;D6R9V8;Q9UKY7-3;D6RAV0 H0Y8K3 CDV3 Protein CDV3 homolog 1 TAPVQAPPAPVIVT(0.529)ET(0.467)PEPAMT(0.002)S(0.002)GVYRPPGAR 66.38600000000001 0.00031319 6039500.0 859.57 1049.2 986.85 1353.6 1243.6 1131.3 998.08 821.18 1143.1 1084.6 1183.1 True False 946.8329136180103 1137.6197661677197 1053.82357541113 1437.208797751355 1156.2538261870948 1122.0870678813199 1036.062480570333 804.8009206967523 1095.0594822373293 1016.1181709010061 1037.586200288821 0.9125342196671962 1.0964098846448167 1.0156491818393394 1.3851464074515405 1.114368932301954 1.081439852967375 0.9985314764999151 0.7756472864353141 1.055391332240647 0.9793096425320239 1.0 10.019015481905514 -7.64281281538325 3.9954333083880074 1.0022658031331113 1.1134993694653614 0.199613734129102 0.12751249759539404 0.35074072751618274 10.387169153609173 0.019902780159274644 0.029906888673778127 2.2760782284725342e-08 7.64281281538325 0.11123356633225012 TAQALSSGS(ph)GSQETK ddPTM_A549_MK2206_60min_R1 1 TAQALSSGSGSQETK 15 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TAQALSS(0.009)GS(0.541)GS(0.449)QETK 133.45 1.8838e-09 3867000.0 1330.2 1061.8 1053.3 1079.6 1958.1 858.56 969.58 1624.5 1941.5 1777.7 1410.2 True False 1554.7052397323996 1115.8410846855134 1202.6737783534 1344.102048465086 1670.0660838793858 949.4122493339964 1145.7401355531956 1854.7778498225985 1501.7533499384147 1376.1163353337292 1060.0084204599714 1.466691405203898 1.0526719063243992 1.1345888911255266 1.2680107275768973 1.5755215257202306 0.8956648183247603 1.0808783340192925 1.749776524433411 1.4167371890185136 1.2982126450812423 1.0 10.049860009929422 -10.933253500275102 1.2632062422081594 1.0041020104231502 1.296158816573613 0.0 0.2523285077439312 0.6493055381934824 1.8820108446124122 0.15762782949864482 0.03931268258098908 1.1661287420744173e-11 10.933253500275102 0.2920568061504629 TAQALSSGSGS(ph)QETK ddPTM_A549_MK2206_60min_R1 1 TAQALSSGSGSQETK 15 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TAQALS(0.001)S(0.064)GS(0.242)GS(0.693)QETK 108.18 3.8253e-06 6239200.0 1582.3 2222.1 1636.9 1747.7 2502.4 1803.3 2088.2 2070.4 2942.6 2421.7 2653.8 True False 1849.353556479158 2335.1953986435124 1869.0370338808325 2175.886578457233 2134.3002749092348 1994.1240090663387 2467.598909901382 2363.8855403340795 2276.1057983666137 1874.6362880563056 1994.7882188460294 0.9270926803192149 1.1706482806452536 0.936960132520763 1.090785757555741 1.0699382795352141 0.9996670274200461 1.237023001533902 1.1850308308425694 1.141026288837481 0.9397670741913491 1.0 10.962019872293192 TAQDLS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 TAQDLSSPR 9 0 Q9UHI6;Q9UHI6-2 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 TAQDLS(0.5)S(0.5)PR;TAQDLS(0.633)S(0.367)PR 84.17 0.0013747 9952000.0 1167.37 1128.48 1220.46 1252.47 1181.3799999999999 1402.46 1282.05 1343.94 1214.43 1282.95 1433.07 True False 1285.880543027627 1223.5809700009045 1303.28775482218 1329.832227334248 1098.403944339747 1391.0388307441315 1330.8391143146794 1317.1340623994654 1163.3917303940855 1201.9443180503831 1256.811474979207 1.023129219160655 0.9735596741119408 1.0369795158368853 1.0581000045024644 0.8739607858512903 1.1067999126656167 1.0589011485089257 1.0479965282153842 0.925669245988809 0.9563441629702405 1.0 10.295552542606087 -8.753459683405108 24.996651928956705 0.9648993654152124 1.0215527130105837 0.1790934212918015 0.058673524654588395 245.8008070830929 769978.418843258 0.010173732912183361 0.011436423886390415 1.7641695289494135e-09 8.753459683405108 0.05665334759537133 TAQDLSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TAQDLSSPR 9 0 Q9UHI6;Q9UHI6-2 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 TAQDLS(0.129)S(0.871)PR;TAQDLS(0.203)S(0.797)PR 90.10799999999999 0.0010711 9060700.0 796.12 1115.9 1047.04 1019.4200000000001 1240.3600000000001 847.8199999999999 898.44 740.18 1185.1599999999999 1410.25 1119.9499999999998 True False 930.4855927347452 1172.6945436057308 1195.526016222485 1269.1779457635034 1057.9046870949562 937.5357496626314 1061.6749184042708 845.1027817061811 916.7231523116213 1091.6735455388382 841.8355059524494 1.1053057113360851 1.3930210062581632 1.4201420678614305 1.5076317603491438 1.2566643716197823 1.1136804554256798 1.2611429559544367 1.0038811332268947 1.0889575764263404 1.2967777408054595 1.0 9.717394549039422 -7.66035264429187 1.0034691646141536 1.0384345688604018 1.358802148785761 0.3197912605019311 0.13582247242514206 0.2516722187946218 0.5105869924069317 0.019874152109509415 0.03587941419889676 2.1859858967911437e-08 7.66035264429187 0.32036757992535936 TAQEKDSLIT(ph)PHVS(ph)R ddPTM_A549_MK2206_60min_R1 1 TAQEKDSLITPHVSR 15 1 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 T(0.001)AQEKDS(0.024)LIT(0.975)PHVS(1)R 72.771 0.00053351 27050000.0 6102.8 7915.7 6491.6 5261.4 9306.9 6802.5 6740.8 5963.1 10477.0 8555.2 11763.0 True False 7132.803440865197 8318.57531931166 7412.206493457634 6550.443236193218 7937.86733877588 7522.336034865948 7965.516105671505 6808.3876862278485 8103.976228331071 6622.574378155553 8841.92245771567 0.8067027815473484 0.9408107070711388 0.8383025896126887 0.7408392538522148 0.8977535571858709 0.8507579738274883 0.9008805657100746 0.7700121459769973 0.9165400700002012 0.7489971111855362 1.0 13.11014436679849 -9.481178328541201 0.8711928737006114 0.9866374229861408 0.846025606096228 0.0 0.0917995248790534 0.29556555320099936 0.47742531612043726 0.017536817904424573 0.012126654350154547 3.3023391365304527e-10 9.481178328541201 -0.14061181688991276 TAQEKDSLIT(ph)PHVS(ph)R ddPTM_A549_PD325901_60min_R1 4 TAQEKDSLITPHVSR 15 1 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 T(0.003)AQEKDS(0.06)LIT(0.937)PHVS(1)R;TAQEKDS(0.017)LIT(0.983)PHVS(1)R;TAQEKDS(0.02)LIT(0.98)PHVS(1)R;TAQEKDS(0.025)LIT(0.975)PHVS(1)R 98.76 6.028999999999999e-06 132017000.0 20976.800000000003 24120.8 20381.800000000003 20962.6 22564.9 20873.199999999997 19149.3 22799.0 23427.800000000003 25202.2 27559.5 True False 23106.34929369602 26153.544467954947 21765.03151371999 22257.4121924812 20980.019268678992 20703.21557968741 19878.037090399026 22344.256059530508 22443.21103836908 23610.928790965656 24169.856214064537 0.9559986244456987 1.0820728198099951 0.9005031441210987 0.9208748283545651 0.868024165425967 0.8565717311814262 0.8224309203309168 0.9244678934634413 0.9285620418920526 0.9768750207635228 1.0 14.560921270117857 -5.7743079943706075 24.99975050994823 0.9330850714491244 1.0190357444216471 0.2791279802432284 0.058759507191313703 246.79248216181648 479444.7095365188 0.009588738065384343 0.03008146775547146 1.6814811598598315e-06 5.7743079943706075 0.08595067297252268 TAQEKDSLITPHVS(ph)R ddPTM_A549_MK2206_60min_R1 1 TAQEKDSLITPHVSR 15 1 P49792;Q7Z3J3;H7BZ48;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD6;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 TAQEKDSLIT(0.021)PHVS(0.979)R 47.81399999999999 0.011886 5589800.0 1289.6 1346.0 1012.2 1380.9 1843.3 1320.5 1199.9 1512.8 1892.5 1861.3 2084.2 True False 1507.2529523070991 1414.5056507691666 1155.7451803373308 1719.2205619909569 1572.1530118047453 1460.234433523042 1417.9062982428266 1727.2440327556972 1463.8517717014943 1440.8310372710087 1566.6356190062916 0.9620954190120747 0.9028938405386058 0.7377243095432834 1.0973965746300656 1.0035218098781344 0.9320830037359044 0.9050645096031946 1.1025180404434305 0.934391988757416 0.9196976117426208 1.0 10.613453949614504 -6.266595573221605 24.99969835098386 0.9800713365871693 0.871103456972835 0.30303959905441313 0.08002622051089528 401.0919782031631 1944690.5313002968 0.010599305816122005 0.025340339226945684 5.412581225494512e-07 6.266595573221605 -0.1089678796143343 TAQLERS(ph)LQEEHVAVAQLR ddPTM_A549_PD325901_60min_R1 2 TAQLERSLQEEHVAVAQLR 19 1 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 T(0.033)AQLERS(0.967)LQEEHVAVAQLR;T(0.04)AQLERS(0.96)LQEEHVAVAQLR 119.02 1.8965e-14 9758400.0 891.1299999999999 1070.89 985.5899999999999 1049.61 1089.6100000000001 1004.03 1035.8000000000002 1158.13 1220.76 958.99 747.26 True False 981.5968615847663 1161.137658588782 1052.4780642341339 1114.442025862736 1013.0795525504354 995.8535125650859 1075.2179358115093 1135.0301886145905 1169.4557025072538 898.4392077377428 655.3517572714265 1.497816784182695 1.7717777448605734 1.6059742764956526 1.7005249676948198 1.5458561624499452 1.5195709807986888 1.6406730032863666 1.731940406081029 1.7844702322555934 1.3709266783359473 1.0 9.35612566475039 -10.793536573099784 0.9624054238523495 0.98692629056753 1.651446256609793 0.573848899167698 0.14031609731634606 0.1646879600023671 0.26214531181727624 0.07742896815239697 0.017944805306686327 1.6086569028845898e-11 10.793536573099784 0.6645199660422629 TAQSPAMVGS(ph)PIR ddPTM_A549_MK2206_60min_R1 1 TAQSPAMVGSPIR 13 0 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 TAQSPAMVGS(1)PIR 74.296 0.0011577999999999998 4813300.0 3344.3 4635.4 3937.5 5081.7 4960.5 4113.3 4776.6 3491.9 6301.0 4665.0 6361.5 True False 3908.7360797151296 4871.322060605795 4495.896707743766 6326.716728126185 4230.817021134617 4548.566675812441 5644.446390688127 3986.8875184952517 4873.833560629385 3611.173260016791 4781.763981531773 0.8174255556760078 1.01872908813984 0.9402171928827749 1.3230926395701168 0.8847816490891154 0.9512319498369237 1.1804109137314647 0.8337691977047571 1.0192543127291946 0.7551968842385234 1.0 12.223327207878336 -5.260404884777153 22.86458521341899 1.013387177096893 0.817425367224414 0.0816772029270264 0.1503746613459493 33.948356093925746 749939.3711522709 0.015576482944265438 0.13115144379182006 5.490287857260387e-06 5.260404884777153 -0.19596180987247902 TAQVPS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 TAQVPSPPR 9 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TAQVPS(1)PPR;TAQVPS(1)PPR 133.42 4.7038999999999995e-05 674250000.0 29473.0 32678.0 29750.0 27693.0 40336.0 31104.0 29201.0 31809.0 44559.0 43585.0 44823.0 True False 34447.32185433242 34341.17062097684 33968.99734739734 34477.786243186005 34402.627832776096 34395.40463483579 34506.44371613365 36318.023160976954 34466.45764610138 33739.118228902844 33692.212048133086 1.022411998509346 1.0192613821828214 1.0082151121116307 1.0233161952658567 1.0210854598572543 1.0208710720951808 1.0241667619459756 1.0779352542686305 1.022979957411588 1.0013921965320278 1.0 15.040127530659978 -5.303833530335597 5.253059551469328 1.0183295127462 1.022480902368362 0.0 0.01993868654611875 1.6919262481707413 115.13742135273209 0.00292105975302495 0.02030996239163947 4.967827070210515e-06 5.303833530335597 0.004151389622162105 TAQVPS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 TAQVPSPPR 9 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TAQVPS(1)PPR;TAQVPS(1)PPR 147.62 2.7873000000000002e-05 963710000.0 37595.0 37664.0 38121.0 36482.0 43221.0 36808.0 38682.0 43096.0 42248.0 42739.0 43810.0 True False 41411.61672402377 40838.07746181951 40708.120300195274 38735.4102833665 40185.30606435545 36508.24785165349 40154.064677602604 42236.416471842036 40472.463481377534 40040.45224611663 38421.64773447151 1.0778199053360664 1.0628924023260982 1.059510008043522 1.0081662960178954 1.045902724996919 0.9501999524840437 1.0450896056073302 1.099286963529884 1.053376569403765 1.0421326155200976 1.0 15.229631770686588 -10.765728991091112 1.09897933936668 1.000810863300678 1.0437423215457258 0.011990230852462647 0.03881053647008146 0.7582014710870787 1.6732033777668167 0.023830433408638076 0.006539645396916065 1.7150271867665703e-11 10.765728991091112 0.04293145824504774 TAQVPS(ph)PPRGK ddPTM_A549_MK2206_60min_R1 4 TAQVPSPPRGK 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TAQVPS(1)PPRGK;TAQVPS(1)PPRGK;TAQVPS(1)PPRGK;TAQVPS(1)PPRGK 105.99 4.6075e-05 317737000.0 39969.3 49489.3 45625.200000000004 42998.5 60207.3 42995.2 42235.8 39364.7 69761.0 72539.0 74588.0 True False 46715.14068443556 52008.0939841089 52095.53942099075 53533.134430276026 51350.88592612806 47544.92352609607 49909.49815094956 44944.76677433777 53960.24488542557 56152.38951947657 56065.74107592417 0.8332207831012876 0.9276269783659792 0.9291866730244951 0.9548279110015064 0.9159048813176079 0.8480209592112727 0.8901959947940788 0.8016440327342433 0.962445940246338 1.0015454793228376 1.0 15.774831862016264 -8.969069221281712 17.047826068864886 0.9834346451891709 0.8916156005455863 0.5108487965766051 0.04400819224763802 3.7139172393641773 2047.0282754180282 0.007920893470101503 0.008321945361871022 1.0738182450747952e-09 8.969069221281712 -0.09181904464358459 TAQVPS(ph)PPRGK ddPTM_A549_PD325901_60min_R1 2 TAQVPSPPRGK 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TAQVPS(1)PPRGK;TAQVPS(1)PPRGK 110.44 2.33e-05 527850000.0 32324.0 31434.0 36290.0 38392.0 37298.0 47003.0 41529.0 42986.0 43765.0 42825.0 42994.0 True False 35605.50868432889 34083.05349763261 38752.857629497805 40763.38664544177 34678.31715111472 46620.22315179498 43109.408820540775 42128.610508135345 41925.709246887156 40121.02219143976 37706.01056142131 0.9442926513354999 0.9039156619900938 1.0277634003833747 1.0810845814366954 0.9197026318821341 1.2364135706123784 1.1433033667223316 1.1172916434505802 1.111910505053091 1.064048452595761 1.0 15.202506895509753 -5.89572141262943 3.81323589980499 1.0697892024621876 0.9241680224651089 0.37588637370928923 0.07735587476669281 0.19941233392949434 5.435621307434574 0.011498506549238197 0.04008055002184828 1.2713894032783297e-06 5.89572141262943 -0.1456211799970787 TAQYS(ph)SPELK ddPTM_A549_PD325901_60min_R1 1 TAQYSSPELK 10 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 TAQYS(0.5)S(0.5)PELK 165.58 2.699e-09 15751000.0 10492.0 8730.6 8352.6 8995.7 10239.0 10207.0 8491.5 9885.5 8942.9 9749.5 11284.0 True False 11557.140116197834 9466.358302043365 8919.457664264077 9551.34395828299 9519.847962632415 10123.877576120067 8814.648679227097 9688.32594747527 8567.061012772465 9133.914906139924 9896.139535169514 1.1678432862759618 0.9565708191968428 0.9013067805446311 0.9651585776795925 0.961975922914202 1.023012816274589 0.8907158845023408 0.9790005398614579 0.8656972733990171 0.9229775786486489 1.0 13.272650127061846 -5.264291928159158 4.971381193783691 0.9423682292987637 1.1787161791379586 0.6622517506499256 0.045417276903147494 0.08805272837047823 6.66190176257955 0.007413566936745371 0.07116433363174704 5.441367669020412e-06 5.264291928159158 0.23634794983919483 TAQYSS(ph)PELK ddPTM_A549_MK2206_60min_R1 1 TAQYSSPELK 10 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 TAQYS(0.106)S(0.894)PELK 110.98 0.0001727 12149000.0 6543.9 7818.6 7511.6 6400.2 9214.0 7380.7 7357.0 6512.9 10990.0 10132.0 10658.0 True False 7648.350337005601 8216.533344059295 8576.857831082689 7968.2492873159 7858.632805711998 8161.720775087859 8693.671669449515 7436.123519919732 8500.782547423734 7843.174163020392 8011.324454164217 0.9546923708763356 1.025614851959767 1.070591745491535 0.9946232152879632 0.9809405237141717 1.0187729659164493 1.0851728349275156 0.9282015180466819 1.0610957771164917 0.9790109248344796 1.0 12.96782505732078 -7.515368845105181 24.683019832090764 1.0254781348532294 1.008496570116026 0.0 0.04776713847508286 1105.9246353420672 3634876.5581182204 0.007024596818207087 0.010691392087252942 3.052327678597477e-08 7.515368845105181 -0.01698156473720336 TARPFGIQAPGGTSQMERS(ph)PMLER ddPTM_A549_MK2206_60min_R1 5 TARPFGIQAPGGTSQMERSPMLER 24 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 TARPFGIQAPGGT(0.007)S(0.028)QMERS(0.965)PMLER;TARPFGIQAPGGT(0.002)S(0.008)QMERS(0.99)PMLER;TARPFGIQAPGGT(0.002)S(0.009)QMERS(0.989)PMLER;TARPFGIQAPGGT(0.001)S(0.003)QMERS(0.996)PMLER;TARPFGIQAPGGTSQMERS(1)PMLER 165.37 7.641599999999999e-35 79168000.0 7088.8 8029.500000000001 7709.799999999999 8133.5 10595.8 8209.9 8731.0 8097.799999999999 11704.1 12038.699999999999 12919.3 True False 8285.216135479652 8438.167253232563 8803.165571393747 10126.207865126686 9037.171856171382 9078.666168709438 10317.309684105434 9245.687948472421 9053.140037607109 9319.149308759732 9711.081255459163 0.8531713325765914 0.8689214960990033 0.9065072508218357 1.0427477228072988 0.930604081918382 0.934876964767007 1.0624264603187699 0.9520760567495904 0.9322484077164747 0.9596407509741407 1.0 13.245416222432496 -6.026006670552738 5.763215813418921 0.9721438810234339 0.8663353079090017 0.5447878179000512 0.04198512400139048 0.10369536813433637 11.132036869371417 0.0060274392451225445 0.017197927199520506 9.418751296662772e-07 6.026006670552738 -0.10580857311443215 TARPFGIQAPGGTSQMERS(ph)PMLER ddPTM_A549_PD325901_60min_R1 5 TARPFGIQAPGGTSQMERSPMLER 24 2 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 TARPFGIQAPGGT(0.049)S(0.049)QMERS(0.903)PMLER;TARPFGIQAPGGT(0.001)S(0.002)QMERS(0.997)PMLER;TARPFGIQAPGGT(0.001)S(0.007)QMERS(0.991)PMLER;TARPFGIQAPGGT(0.004)S(0.009)QMERS(0.988)PMLER;TARPFGIQAPGGT(0.001)S(0.003)QMERS(0.996)PMLER 86.304 3.4674999999999995e-07 116177900.0 11292.1 10904.1 11745.9 11794.800000000001 13870.800000000001 13552.1 12342.4 12557.0 13069.5 12090.9 13542.000000000002 True False 12438.46567919534 11823.026774942275 12543.04740783461 12523.338008065657 12896.562859662245 13441.73619078444 12812.096786020436 12306.54078422407 12520.234365410528 11327.478510554101 11876.419849810844 1.0473245166887097 0.9955042786004724 1.0561303462199836 1.054470805717189 1.0858965094491544 1.1318003540434391 1.0787844272972966 1.036216380007825 1.0542094775817428 0.9537788873921054 1.0 13.535812380389267 -10.293299954165496 0.709774623612121 1.0001231727224993 1.0613943981851235 0.42139313486482655 0.03517727632110815 0.7075567738605525 0.6581372721202807 0.0231333373779908 0.007255108866187626 5.089792129633739e-11 10.293299954165496 0.0612712254626242 TARS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 TARSPPK 7 1 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 T(0.06)ARS(0.94)PPK;T(0.017)ARS(0.983)PPK 54.982 0.011472 9791400.0 3574.0 3194.7 3117.5 2894.5 3618.5 2904.0 1965.29 2594.4 2926.0 3771.1000000000004 4713.9 True False 3936.8298489602603 3463.928580800623 3329.0722970504107 3073.2866911135466 3364.349043147318 2880.3507868181314 2040.080186397953 2542.652656732573 2803.030395439091 3532.992102420047 4134.120183874119 0.9522775521419466 0.8378877310612064 0.8052674206318571 0.7433955846521965 0.8138004928522803 0.6967264275609255 0.4934738458634206 0.6150408173063396 0.678023441692096 0.854593467360025 1.0 12.013364614924928 -2.003936863761092 16.54961917589341 0.7953472680182441 0.7729951534970588 0.0 0.14209359777734912 0.0 0.0 0.022919061676178507 0.0 0.009909759991057678 2.003936863761092 -0.02235211452118524 TARS(ph)PPKLK ddPTM_A549_MK2206_60min_R1 2 TARSPPKLK 9 2 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 T(0.02)ARS(0.98)PPKLK;T(0.05)ARS(0.95)PPKLK 57.019 0.0029499 7188000.0 3086.2 3661.3 3612.7 3373.8 3852.2 3077.3 3234.2 2665.3 4431.799999999999 5409.6 5340.1 True False 3607.0751096542867 3847.644531323294 4125.035183762771 4200.381151455638 3285.5464829784823 3402.9378434535843 3821.812275837109 3043.1144371389214 3428.004376130345 4187.567602869634 4014.0057907376918 0.8986222984475019 0.9585548033342961 1.0276604964749376 1.046431263539282 0.8185206136373476 0.8477660523823495 0.9521192731350641 0.7581240774891008 0.8540108198250377 1.0432390537483618 1.0 11.970826982643764 -6.7504232949846275 24.999931689426354 0.9049960389334555 0.9842872582826857 0.18994213226084766 0.08475923493915756 327.8712336146318 744066.8305430707 0.012575150241817063 0.025981820915909917 1.776547014003403e-07 6.7504232949846275 0.07929121934923022 TARS(ph)PPKLK ddPTM_A549_PD325901_60min_R1 2 TARSPPKLK 9 2 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 T(0.007)ARS(0.993)PPKLK;T(0.005)ARS(0.995)PPKLK 65.395 0.0011997 14681000.0 3632.8 3707.4 3698.0 3581.7 4515.3 5049.3 4045.9 4476.1 4995.700000000001 4193.9 4641.6 True False 4001.5991816739865 4019.8356091214305 3948.968517880487 3802.933474369108 4198.160904939362 5008.180174890081 4199.868938501429 4386.820674067479 4785.748102014718 3929.096438264548 4070.712625526661 0.9830217826187785 0.9875016929256586 0.970092679379345 0.934218114666616 1.0313085916734817 1.2302956842211703 1.0317281824722415 1.0776542285393875 1.1756536366640586 0.9652109592865717 1.0 11.99106566178691 -7.000042965549454 24.46676075673517 1.091035725828189 0.9717264616697386 0.3408269692362429 0.07144949825059708 1.0222550923795442 582900.221723241 0.010915035189993176 0.02047259776921191 9.999010730599068e-08 7.000042965549454 -0.11930926415845045 TAS(ph)APAK ddPTM_A549_MK2206_60min_R1 1 TASAPAK 7 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 T(0.012)AS(0.988)APAK 101.72 0.010864 8418900.0 4768.4 3846.2 2938.4 2385.2 3763.9 3340.2 2329.5 2719.5 3352.9 5940.2 6548.9 True False 5573.189343812943 4041.955151551536 3355.1093043896617 2969.5741070756953 3210.2352960081803 3693.657746954688 2752.7399964635915 3104.997453119459 2593.4735034810774 4598.304694351927 4922.627389554892 1.1321574644545411 0.8210971157654515 0.6815688125225 0.6032498241440546 0.6521385922525517 0.7503427447692057 0.5592013732959984 0.6307602033230907 0.526847412620353 0.9341159365644591 1.0 12.265212825862774 -3.8325020278188475 23.779232218877517 0.7451935365417119 49.70969166517206 0.0 0.1869286213468024 0.0 0.0 0.02803663434871106 0.0 0.00014706115487716595 3.8325020278188475 48.964498128630346 TAS(ph)APAK ddPTM_A549_PD325901_60min_R1 2 TASAPAK 7 0 A0A2U3TZV8;Q4KWH8-2;Q4KWH8;Q4KWH8-3;Q4KWH8-4 A0A2U3TZV8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 1 T(0.133)AS(0.867)APAK;T(0.004)AS(0.996)APAK 81.296 0.015479 24655000.0 8688.9 9504.599999999999 7176.4 7855.5 7856.4 6701.9 6050.799999999999 7209.5 8166.3 9126.9 11516.8 True False 9570.990731569887 10305.585998396602 7663.433659198903 8340.716393865074 7304.593567108627 6647.3219484078645 6281.066505124804 7065.700866756665 7823.09881007322 8550.625976393498 10100.306611010308 0.9475940780982416 1.0203240748317997 0.758732774591716 0.8257884354493643 0.7232051311339317 0.658130708741222 0.6218688943836453 0.6995531065417727 0.7745407254810748 0.8465709315272163 1.0 13.30211146851364 -5.755539598430666 24.90337616330749 0.8222019404347958 0.9839591197023585 0.27221120101575724 0.10998324338728102 192.50155470830592 812535.3301256767 0.02037553828602988 0.07491450551574365 1.7557408006383534e-06 5.755539598430666 0.16175717926756272 TAS(ph)APNLDR ddPTM_A549_MK2206_60min_R1 2 TASAPNLDR 9 0 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 T(0.005)AS(0.995)APNLDR;T(0.027)AS(0.973)APNLDR 93.839 0.00096514 30725000.0 6916.4 7976.1 6794.0 6170.4 8705.7 6778.9 6434.4 6901.5 9237.1 9262.0 10534.3 True False 8083.719230254973 8382.049421322406 7757.491360612354 7682.148276999786 7425.103062371055 7496.238698530367 7603.447191777347 7879.808759957319 7144.911598617635 7169.707767261634 7918.3425781105325 1.020885261090068 1.058561098946861 0.9796862517740977 0.9701712449567814 0.9377092477530602 0.9466929000082632 0.960232159290041 0.9951336005264869 0.9023241326245507 0.9054556173259762 1.0 12.950982769944943 -5.922404762784618 3.5572725935061085 0.9558938581519637 1.0395876610543544 0.5382451240443317 0.03071970756368064 0.15732799293125674 3.93218423504665 0.005048891725771939 0.017657145677828768 1.1956256878278313e-06 5.922404762784618 0.0836938029023907 TAS(ph)APNLDR ddPTM_A549_PD325901_60min_R1 1 TASAPNLDR 9 0 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 T(0.073)AS(0.927)APNLDR 61.235 0.0077248 22710000.0 6597.7 7110.0 7272.8 7516.4 8001.7 6927.4 7667.4 8313.1 7397.0 8047.6 9391.2 True False 7267.493647029964 7709.184652547171 7766.375942899194 7980.670957017049 7439.688196366419 6870.985551172151 7959.1871027622665 8147.288698999207 7086.129813760409 7539.473162587996 8236.14193572173 0.882390529904475 0.9360189167103783 0.9429628585217711 0.9689817173260876 0.9032977156572621 0.8342480744984939 0.9663732321369722 0.9892117890371523 0.8603700457160048 0.9154132142730388 1.0 13.007752977210863 -11.099385999082518 1.436685586320311 0.9999783286345151 0.9150962032487306 0.0 0.05176665060077731 0.43422753258882996 1.6026863158319493 0.03510256516839875 0.0076628008855807155 7.954520417566508e-12 11.099385999082518 -0.08488212538578443 TAS(ph)EGDGGAAAGAAAAGAR ddPTM_A549_MK2206_60min_R1 6 TASEGDGGAAAGAAAAGAR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.002)AS(0.998)EGDGGAAAGAAAAGAR;TAS(1)EGDGGAAAGAAAAGAR;T(0.001)AS(0.999)EGDGGAAAGAAAAGAR;T(0.001)AS(0.999)EGDGGAAAGAAAAGAR;T(0.008)AS(0.992)EGDGGAAAGAAAAGAR;TAS(1)EGDGGAAAGAAAAGAR 229.02 5.772799999999999e-75 662408200.0 7102.959999999999 8780.84 8016.900000000001 7533.890000000001 11804.14 9579.740000000002 9926.14 8875.07 12841.37 12906.220000000001 14611.300000000001 True False 8301.765997300892 9227.747249999946 9153.816969221842 9379.693388209176 10067.766642849707 10593.461728283246 11729.591151962704 10133.138351261969 9932.820198454112 9990.695938240928 10982.910958634795 0.7558802969966738 0.8401913923143541 0.8334600001491486 0.8540261706150714 0.9166756136663751 0.9645404363362008 1.0679856366076488 0.9226277431754345 0.9043886667081554 0.9096582842079963 1.0 13.422972862762682 -6.698135672851705 1.6285793172335732 0.9609861849234871 0.8090349496544674 0.6660367935450697 0.04731488701262645 0.1912049941093574 1.019965733750564 0.007885722480815892 0.020473119923319478 2.0038459315404822e-07 6.698135672851705 -0.15195123526901966 TAS(ph)EGDGGAAAGAAAAGAR ddPTM_A549_PD325901_60min_R1 4 TASEGDGGAAAGAAAAGAR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.001)AS(0.999)EGDGGAAAGAAAAGAR;T(0.014)AS(0.986)EGDGGAAAGAAAAGAR;T(0.001)AS(0.999)EGDGGAAAGAAAAGAR;TAS(1)EGDGGAAAGAAAAGAR 288.41 6.171599999999998e-129 573298200.0 10420.2 10788.0 10161.4 10806.45 11545.5 11052.8 11639.900000000001 11413.25 12075.900000000001 12862.7 13182.6 True False 11478.051033054204 11697.142620489294 10851.013709462086 11473.93987327137 10734.583909812724 10962.789661344166 12082.862764097681 11185.603775228577 11568.391918073447 12050.54692683788 11561.223771386529 0.9928058880290707 1.0117564413413707 0.9385696466076386 0.992450289014284 0.9284989307429807 0.9482378230993627 1.045119703850226 0.9675103601845686 1.0006200162568135 1.0423245121041946 1.0 13.497006496718958 -7.7262025713803295 24.999990457858097 1.000376438332064 0.9685560251849408 0.2862608178431374 0.03131053063686273 200.3333473542847 142133.22849317646 0.004173012894926357 0.0061894303210556475 1.8784404367297128e-08 7.7262025713803295 -0.03182041314712314 TAS(ph)EINFDK ddPTM_A549_MK2206_60min_R1 2 TASEINFDK 9 0 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.407)AS(0.593)EINFDK;T(0.009)AS(0.991)EINFDK 125.54 7.283100000000001e-05 57886000.0 15626.7 17580.1 15438.4 15723.8 20716.1 16628.0 16172.599999999999 17952.7 22371.0 21001.1 27991.0 True False 18264.104923865794 18474.851999321712 17627.79726548099 19576.1317058682 17668.789132451722 18387.563923226902 19110.95207847482 20497.550202837905 17304.004219146158 16256.936924102602 21040.062187700365 0.8680632576524728 0.8780797240286567 0.8378205876114699 0.9304217606976489 0.8397688645036693 0.8739310634726135 0.9083125281657548 0.9742152860565402 0.8224312297547182 0.7726658209977206 1.0 14.360851348331487 -10.989608862178834 1.204711111115061 1.0014554790630699 0.8773781519641249 0.0 0.07888635352684864 0.3114821439219391 0.7884871670700399 0.03257517078102681 0.007096919479786866 1.0242150138577938e-11 10.989608862178834 -0.12407732709894492 TAS(ph)EINFDK ddPTM_A549_PD325901_60min_R1 2 TASEINFDK 9 0 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.018)AS(0.982)EINFDK;T(0.014)AS(0.986)EINFDK 182.29 5.5253e-11 83443000.0 39214.0 38888.0 39712.0 37909.0 46798.0 37006.0 38300.0 37737.0 37501.0 42689.0 45522.0 True False 43194.976412178985 42165.22823744786 42407.09512765547 40250.55283241439 43511.069924335556 36704.635405300214 39757.52745856419 36984.30593089619 35924.96338324038 39993.609254649695 39923.08258773367 1.0819549396581567 1.0561616364364381 1.062219958452933 1.0082025290497316 1.0898725024230542 0.9193838007032473 0.9958531476419522 0.9263890344544583 0.8998544464669742 1.001766563660535 1.0 15.284935499581826 -7.2619520022669 24.99957791784813 0.9509270862781807 1.0567677135794473 0.6490344969729422 0.03733833338305576 24.702605976515912 1204699.112855196 0.006353631659536437 0.0105493945823884 5.470764218180455e-08 7.2619520022669 0.10584062730126664 TAS(ph)EINFDKLQFEPPLR ddPTM_A549_MK2206_60min_R1 1 TASEINFDKLQFEPPLR 17 1 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.072)AS(0.928)EINFDKLQFEPPLR 67.563 0.0005407999999999999 4934700.0 1247.1 2142.3 1973.9 1691.2 2560.9 2160.5 2071.3 1824.6 2884.0 2819.7 2724.5 True False 1457.5799913323376 2251.3339194968685 2253.8287013118525 2105.5440759208527 2184.195002403716 2389.1226759761676 2447.6283986585263 2083.2426376031476 2230.7786048016424 2182.727811633301 2047.9314576252964 0.7117328003850735 1.0993209324043638 1.1005391283579904 1.028132102801117 1.0665371608366354 1.1666028504423207 1.195171053965206 1.0172423641652522 1.0892838217292529 1.0658207351159639 1.0 10.999951715137273 -5.258117803553368 24.94940483210394 1.0656557867495342 0.7117326650085647 0.7631821394175982 0.05872614898052351 128.9109131989946 968243.8835459944 0.009085630331136527 0.09044318000551671 5.519277070900421e-06 5.258117803553368 -0.3539231217409695 TAS(ph)EINFDKLQFEPPLR ddPTM_A549_PD325901_60min_R1 4 TASEINFDKLQFEPPLR 17 1 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.029)AS(0.971)EINFDKLQFEPPLR;T(0.186)AS(0.814)EINFDKLQFEPPLR;T(0.016)AS(0.984)EINFDKLQFEPPLR;T(0.005)AS(0.995)EINFDKLQFEPPLR 117.31 3.6330000000000003e-10 16659900.0 12023.0 11843.800000000001 13102.7 13585.1 15226.099999999999 14764.599999999999 13254.800000000001 15529.2 14559.2 14756.199999999999 16987.4 True False 13243.5661091352 12841.918591819718 13991.92801493582 14424.220772999355 14156.671263193413 14644.361992787519 13759.218667304873 15219.457923578266 13947.327454981816 13824.49101369115 14898.057492000946 0.8889458317801449 0.8619861078341785 0.9391780117943803 0.9681947314771739 0.9502360472695452 0.9829712363944333 0.9235578983832263 1.0215733112689278 0.9361842953331604 0.9279391639556892 1.0 13.862836614307355 -5.917555665208024 3.427647137192515 0.9688762924230057 0.8753250118820473 0.5603815265607262 0.029509053865962837 0.11611075927080579 2.6904827264452047 0.004064451357103926 0.014434851684642442 1.2090502043576933e-06 5.917555665208024 -0.0935512805409584 TAS(ph)EINFDKLQFEPPLRK ddPTM_A549_MK2206_60min_R1 2 TASEINFDKLQFEPPLRK 18 2 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.053)AS(0.947)EINFDKLQFEPPLRK;T(0.029)AS(0.971)EINFDKLQFEPPLRK 81.477 4.788e-05 68304000.0 4017.3 5512.200000000001 4602.9 4301.1 6739.0 4535.700000000001 4231.9 4298.6 7389.0 6231.5 6906.6 True False 4695.32202644487 5792.747435490192 5255.660433288581 5354.869693083714 5747.702027099319 5015.664763446014 5000.781451399128 4907.939713910389 5715.403297808371 4823.799822035292 5191.500607537116 0.9044248246120044 1.1158136872949944 1.0123586281889896 1.0314685671633008 1.1071369266055175 0.9661300542205813 0.963263192946352 0.9453797822511959 1.1009154635387393 0.9291725431047838 1.0 12.341935895718489 -8.77382895797175 24.995542281501315 1.0476545128989396 1.0111365932978056 0.0 0.07370871489438112 544.3285439935088 1098162.2042944548 0.011831900774023692 0.012635122150672798 1.6833368939608323e-09 8.77382895797175 -0.03651791960113404 TAS(ph)EINFDKLQFEPPLRK ddPTM_A549_PD325901_60min_R1 1 TASEINFDKLQFEPPLRK 18 2 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.032)AS(0.968)EINFDKLQFEPPLRK 74.584 0.00010791 64609000.0 2809.8 2697.6 3285.0 2931.2 2750.8 2951.2 2880.5 2561.2 2806.0 3390.9 3483.3 True False 3095.0488275345656 2924.936219228022 3507.939854309734 3112.2535667617985 2557.5932977448215 2927.1664056672407 2990.1190037700812 2510.11485677747 2688.073578127849 3176.7979953053837 3054.8761824579906 1.0131503349652133 0.9574647365493493 1.1483083584380178 1.0187822290910793 0.8372166808040484 0.9581947780652789 0.9788020283572328 0.821674826361637 0.8799288146483869 1.0399105579294847 1.0 11.576898191850498 -6.548497228942118 24.099754726212172 0.9303898635099249 1.0401104777095331 0.307495411526453 0.0752376069804979 131.12362855455103 123349.84605035656 0.010566273593170233 0.02199627823840427 2.828152156287855e-07 6.548497228942118 0.10972061419960821 TAS(ph)ELLLDR ddPTM_A549_MK2206_60min_R1 2 TASELLLDR 9 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.002)AS(0.998)ELLLDR;T(0.117)AS(0.883)ELLLDR 107.83 0.00046937 28083000.0 705.74 816.34 680.26 636.23 770.0999999999999 949.12 885.89 773.48 1317.67 1000.55 988.9300000000001 True False 824.8516583135943 857.8882191299416 776.7310969929584 792.10637856145 656.8193101453013 1049.5552484251332 1046.8447458541023 883.1231586831544 1019.2198488866094 774.525060087846 743.3513879204929 1.1096389563771398 1.154081680710737 1.0449043475466486 1.0655880804599664 0.8835919604357463 1.4119234395475309 1.40827711209718 1.188029205344823 1.3711144762073448 1.0419366569753246 1.0 9.537900534822437 -7.256246892338139 24.957525965315018 1.214605335735788 1.0576660784760692 0.291428280576128 0.14143392872063656 625.0150954525575 3004113.3326046397 0.025492043588442828 0.043352350307614945 5.543105030493667e-08 7.256246892338139 -0.1569392572597188 TAS(ph)ELLLDR ddPTM_A549_PD325901_60min_R1 2 TASELLLDR 9 0 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.079)AS(0.921)ELLLDR;T(0.018)AS(0.982)ELLLDR 118.28 0.00016774 38336000.0 2279.05 2232.92 1996.93 2016.04 2271.6000000000004 2386.3999999999996 2211.39 2418.5 2782.8 2366.06 2686.0 True False 2510.417478252066 2421.096004833422 2132.4536783155972 2140.5662120409584 2112.0506525945693 2366.9659496083973 2295.5456565690392 2370.261120223453 2665.8485934476753 2216.666567805674 2355.639027956871 1.065705504306167 1.0277873545563236 0.9052548599371567 0.9086987380649518 0.8965935050016665 1.0048084284209498 0.9744895670878942 1.0062072720366093 1.131688073516026 0.9410043480763125 1.0 11.201902765903718 -8.53862280303599 9.306360855452798 1.0625726544130647 0.9668836167687873 0.04416754499013442 0.06780153011426501 0.21146051246581296 110.8928378383935 0.011706276698781035 0.013365703136815286 2.8931916096850613e-09 8.53862280303599 -0.09568903764427739 TAS(ph)ELLLDRR ddPTM_A549_MK2206_60min_R1 2 TASELLLDRR 10 1 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.109)AS(0.891)ELLLDRR;T(0.368)AS(0.632)ELLLDRR 157.03 5.853699999999999e-09 43787000.0 2628.8 2808.8 3086.2 2802.2 4005.8 2718.5 2377.91 2007.87 4410.3 4163.0 3956.6 True False 3072.4771720106232 2951.7559226451995 3523.869566841605 3488.7391257955387 3416.552126451174 3006.169865605746 2809.9454668344 2292.491721343985 3411.3740918019025 3222.5754086709317 2974.0670233952083 1.0330894185777526 0.9924981177039721 1.1848655524981209 1.173053296496586 1.1487811470202924 1.0107942564703498 0.9448157841535642 0.7708271882611664 1.1470400851650824 1.083558434736291 1.0 11.538221444907272 -7.270788434004033 24.05614062334379 1.0321182537135254 1.1081821981397038 0.17298183796377553 0.10617000274383234 820.5022942420895 2111242.750974052 0.018124792160693425 0.02923457920704309 5.360577337493791e-08 7.270788434004033 0.07606394442617836 TAS(ph)ELLLDRR ddPTM_A549_PD325901_60min_R1 1 TASELLLDRR 10 1 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.111)AS(0.889)ELLLDRR 142.1 2.0605e-08 40243000.0 849.74 823.26 782.37 975.32 964.93 1013.5 1104.5 871.58 1109.8 873.75 1019.9 True False 936.004979254474 892.6390094312217 835.4663329730006 1035.5633012875674 897.1566456277851 1005.2463920248535 1146.5323519055912 854.1956531587168 1063.1589654334598 818.5812758848925 894.4587656787833 1.0464484391789288 0.9979655224842248 0.934046783407601 1.1577540978109855 1.0030162150034434 1.1238599593375287 1.2818168884906789 0.954986060772168 1.1886058991513757 0.9151693820829079 1.0 9.80487116571103 -6.260272564851366 24.99899810761907 1.0950515171726631 0.9933347770433284 0.0986744345808106 0.10627325284035441 141.9380814674362 3040973.821833549 0.013717435407733411 0.03422410897166798 5.491960881426465e-07 6.260272564851366 -0.10171674012933474 TAS(ph)EPNLK ddPTM_A549_PD325901_60min_R1 1 TASEPNLK 8 0 P56524-2;P56524;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UQL6-2;Q9UKV0-5;Q9UKV0-7;Q9UQL6;Q9UQL6-3 P56524-2 HDAC4;HDAC9;HDAC5 Histone deacetylase 4;Histone deacetylase 9;Histone deacetylase 5 1 T(0.044)AS(0.956)EPNLK 98.73 0.0024274 18135000.0 8439.0 9424.8 8163.5 9524.2 9753.6 10400.0 9320.2 9888.1 9662.7 10638.0 10300.0 True False 9295.72106753655 10219.06097233848 8717.524201113405 10112.488202972403 9068.540784093319 10315.305848109005 9674.88531120914 9690.874088435614 9256.610321944398 9966.314864507567 9033.165297079588 1.0290657551170734 1.1312824061397715 0.9650575312655655 1.1194844631307432 1.0039161784214408 1.1419370186266746 1.071040437435261 1.0728104456993235 1.0247360717440928 1.10330261173563 1.0 13.141015893434218 -8.923103457101769 2.4638595286636975 1.009564347435738 1.0680565780803593 0.0 0.0583104672801059 0.2921629264521905 3.474346303638224 0.00860499887615082 0.00886071342028957 1.1937037079499777e-09 8.923103457101769 0.05849223064462117 TAS(ph)ET(ph)RS(ph)EGSEYEEIPK ddPTM_A549_PD325901_60min_R1 1 TASETRSEGSEYEEIPK 17 1 P48634 P48634 PRRC2A Protein PRRC2A 3 T(0.151)AS(0.812)ET(0.676)RS(0.667)EGS(0.534)EY(0.16)EEIPK 49.528 0.0083415 5742200.0 685.6 750.43 644.9 944.16 716.8 659.78 683.81 734.85 686.07 758.5 746.69 True False 755.2016072879562 813.6713697343137 688.6667920987363 1002.4786188570613 666.4544408257557 654.406970429362 709.8327637451902 720.1928402713276 657.2368637726922 710.6081805535799 654.8518636578981 1.1532403726692027 1.2425273789239526 1.0516375234117123 1.5308479283503533 1.017717865385688 0.9993206200467217 1.083959293908362 1.0997797826342666 1.0036420452428307 1.0851434041650825 1.0 9.355024776215686 -6.917962186516641 24.999999997670802 1.016290260787542 1.2360953548270341 0.4094691738237439 0.11473844664424526 17.651725057427193 5377.653512768752 0.01483457067341863 0.02803470512370307 1.2079190025417857e-07 6.917962186516641 0.21980509403949222 TAS(ph)ET(ph)RSEGSEYEEIPK ddPTM_A549_MK2206_60min_R1 1 TASETRSEGSEYEEIPK 17 1 P48634 P48634 PRRC2A Protein PRRC2A 2 T(0.163)AS(0.762)ET(0.408)RS(0.347)EGS(0.268)EY(0.052)EEIPK 40.81 0.05185599999999999 3242800.0 509.07 622.49 676.16 471.05 489.82 575.95 597.33 502.04 760.77 567.35 886.83 True False 594.9885704334479 654.1720821302368 772.0496553417207 586.4572711462379 417.7681268606304 636.896646715332 705.8571290352425 573.2057074330179 588.4568097000505 439.185240958312 666.6056357371407 0.892564566717925 0.9813479620628249 1.1581805102622313 0.8797664461653196 0.6267095632917313 0.9554324364675434 1.0588826304396557 0.8598872807295725 0.8827660285969946 0.658838175696873 1.0 9.380689704366082 -10.980817934938063 1.2736520886651415 0.9996747029577793 0.9196340057512982 0.0 0.1618216013191816 1.3198584353780887 3.8342186041819146 0.09034295974325816 0.02114240915014185 1.0451582789573313e-11 10.980817934938063 -0.0800406972064811 TAS(ph)ETRS(ph)EGS(ph)EYEEIPK ddPTM_A549_PD325901_60min_R1 1 TASETRSEGSEYEEIPK 17 1 P48634 P48634 PRRC2A Protein PRRC2A 3 T(0.185)AS(0.792)ET(0.281)RS(0.761)EGS(0.716)EY(0.265)EEIPK 45.413000000000004 0.0092587 4454500.0 532.04 521.88 734.94 569.07 522.34 553.88 379.86 565.88 605.07 776.25 679.07 True False 586.0523091328529 565.8606591380194 784.8174479532412 604.2201614482591 485.65264037517437 549.369384918329 394.3157801673676 554.5930794757276 579.6410120876042 727.2374425243463 595.5486949794014 0.9840543923165226 0.9501501118352567 1.3178056715922888 1.0145604659064154 0.8154709169364764 0.9224592204627876 0.6621050192730353 0.9312304504250649 0.9732890307276261 1.221121712892847 1.0 9.218075664502479 -6.523057660013576 24.99999929624392 0.9418300974040973 1.0865455651163394 0.1585703207295488 0.1536427233358349 7.906792166083936 1104837.8312392698 0.019204612478146657 0.040290922993866767 2.9987643553464994e-07 6.523057660013576 0.14471546771224209 TAS(ph)FHEAR ddPTM_A549_MK2206_60min_R1 2 TASFHEAR 8 0 Q9NS62-2;Q9NS62 Q9NS62-2 THSD1 Thrombospondin type-1 domain-containing protein 1 1 T(0.002)AS(0.998)FHEAR;T(0.001)AS(0.999)FHEAR 107.45 0.0005616000000000001 16483000.0 935.22 969.74 1097.0 832.09 1458.6 1173.8 847.15 1270.1 2084.8 1712.3 1646.4 True False 1093.0622720662564 1019.0956239055657 1252.5710954653753 1035.9520873539393 1244.0418721957362 1298.0107368946194 1001.0661893127838 1450.140564518119 1612.5961287414932 1325.490240756002 1237.5534416716039 0.8832445010130806 0.8234760533080817 1.0121349537628748 0.8370968496961594 1.0052429497633397 1.0488522702836605 0.8089074423813253 1.1717801556588674 1.3030517102867953 1.071056971055423 1.0 10.27327511156735 -8.276488432406408 24.54080754614493 1.1492567892776269 0.9224487743786811 0.5143987299165216 0.1022201224679283 466.4457056426641 760641.1675078418 0.021142051031367123 0.02561316807246635 5.290680889454576e-09 8.276488432406408 -0.22680801489894575 TAS(ph)FHEAR ddPTM_A549_PD325901_60min_R1 2 TASFHEAR 8 0 Q9NS62-2;Q9NS62 Q9NS62-2 THSD1 Thrombospondin type-1 domain-containing protein 1 1 T(0.014)AS(0.986)FHEAR;T(0.003)AS(0.997)FHEAR 82.008 0.0011117000000000002 39729000.0 3817.8 3885.4 3798.0 4011.3 4264.700000000001 4336.5 4307.1 4846.4 4235.3 4566.0 4649.1 True False 4205.380245484188 4212.8362938124865 4055.7551192293386 4259.06889067672 3965.1621844162955 4301.184981761994 4471.009047435557 4749.734750072752 4057.305069652486 4277.701980761565 4077.2901730730764 1.031415490920179 1.0332441683043736 0.9947182925596127 1.0445832182374786 0.9724993846655094 1.0549126501144181 1.0965638592422604 1.1649243856717832 0.9950984348495542 1.049153187333105 1.0 11.993394919034923 TAS(ph)FSESR ddPTM_A549_MK2206_60min_R1 6 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.144)AS(0.747)FS(0.109)ESR;T(0.153)AS(0.818)FS(0.029)ESR;TAS(0.483)FS(0.483)ES(0.034)R;T(0.022)AS(0.505)FS(0.462)ES(0.011)R;T(0.256)AS(0.739)FS(0.005)ESR;T(0.022)AS(0.834)FS(0.143)ES(0.002)R 162.88 0.00016464 4847387000.0 9246.24 10123.539999999999 9944.63 10543.88 19833.050000000003 18083.149999999998 19893.73 21855.8 29161.43 26609.730000000003 27704.75 True False 10806.779263135839 10638.784944864557 11354.928070280615 13127.131073332755 16915.63461768248 19996.696930376504 23508.163232387913 24953.926580580333 22556.412666234653 20598.573511739887 20824.895962798455 0.5189355703116617 0.5108685759520556 0.5452573732212171 0.6303575824236064 0.8122794297700469 0.9602303399785793 1.1288490119894399 1.198273769297958 1.0831464755708444 0.9891321209257002 1.0 14.346021667729485 -6.94824378583703 1.4736613740211186 1.060287405611706 0.520802259518039 0.9447096588921906 0.058226168503218816 0.07217856986414749 0.31248717848013113 0.01043972143184726 0.024155815802570126 1.1265648953788535e-07 6.94824378583703 -0.5394851460936669 down TAS(ph)FSESR ddPTM_A549_PD325901_60min_R1 8 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.033)AS(0.938)FS(0.029)ESR;T(0.008)AS(0.968)FS(0.025)ESR;T(0.001)AS(0.486)FS(0.486)ES(0.028)R;T(0.008)AS(0.982)FS(0.01)ESR;T(0.009)AS(0.729)FS(0.234)ES(0.028)R;T(0.004)AS(0.968)FS(0.025)ES(0.003)R;T(0.016)AS(0.975)FS(0.009)ESR;T(0.002)AS(0.996)FS(0.003)ESR 174.92 3.411e-06 4776641200.0 17898.04 17989.32 18787.87 19349.73 21538.920000000002 18849.45 18801.71 18974.19 21571.309999999998 21483.36 22551.09 True False 19715.035844959333 19505.34312992404 20062.927838840245 20544.918875674728 20026.10056444014 18695.94632871524 19517.21936274049 18595.734895485897 20664.742856951205 20126.89698322684 19777.4488931377 0.9968442316036006 0.9862416146448455 1.0144345687477214 1.0388053073317924 1.0125724845831212 0.9453163767346294 0.9868421083121844 0.9402494222567891 1.0448639239877582 1.0176690174742602 1.0 14.271568723412805 TAS(ph)FSESRADEVAPAK ddPTM_A549_MK2206_60min_R1 4 TASFSESRADEVAPAK 16 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.017)AS(0.935)FS(0.047)ESRADEVAPAK;T(0.001)AS(0.629)FS(0.368)ES(0.002)RADEVAPAK;T(0.07)AS(0.836)FS(0.094)ESRADEVAPAK;TAS(0.999)FS(0.001)ESRADEVAPAK 216.61 4.5164e-47 180409300.0 13593.8 19327.399999999998 17052.7 19570.100000000002 34415.1 16305.2 17458.4 13268.1 55573.1 72172.40000000001 71695.9 True False 15888.101103498948 20311.082105999987 19471.029279528175 24364.775378535174 29352.68437940729 18030.60544148422 20630.36529481004 15148.8938068521 42985.881582004906 55868.604714091256 53891.829323823564 0.29481465563232256 0.37688611355082013 0.36129835494229107 0.4521051833689456 0.5446592692750098 0.33457029883217493 0.3828106329597189 0.2810981552662815 0.7976326304255263 1.0366804284632778 1.0 15.717778938472613 -8.893451952195853 3.661666868002681 0.9157012554642557 0.38466746515840233 0.8977528430861231 0.0853917404987096 0.05481667558696937 1.3463828100554547 0.016994607285642283 0.017826948297328966 1.27805059779619e-09 8.893451952195853 -0.5310337903058534 down TAS(ph)FSESRADEVAPAK ddPTM_A549_PD325901_60min_R1 3 TASFSESRADEVAPAK 16 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.078)AS(0.847)FS(0.075)ESRADEVAPAK;T(0.41)AS(0.553)FS(0.038)ESRADEVAPAK;TAS(0.976)FS(0.023)ES(0.001)RADEVAPAK 175.52 8.323e-29 469667000.0 22409.3 25992.8 24528.3 26994.9 28722.0 33190.9 27436.9 31300.3 28888.300000000003 28704.200000000004 32877.2 True False 24684.275639145242 28183.304477739537 26192.937938650073 28662.313663133882 26704.665805520865 32920.60431480784 28481.026243547763 30675.990961889664 27674.225212769332 26891.811913310572 28833.512825742204 0.8560967159404672 0.9774495618368717 0.9084199381792059 0.994062493750138 0.9261676149872127 1.1417479553659078 0.9877751079334411 1.0639005780281658 0.9597937434824843 0.9326581910374061 1.0 14.81545899257195 -3.7811666701185795 0.6799673333781074 0.9951641144348548 1.1319586421268013e-09 0.30393401467852055 0.06151320335579466 16.751793750582095 1.1170332230714914 0.009234597115246828 20.293399336446335 0.00016551346470192193 3.7811666701185795 -0.9951641133028961 TAS(ph)FSESRADEVAPAKK ddPTM_A549_MK2206_60min_R1 4 TASFSESRADEVAPAKK 17 2 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.01)AS(0.981)FS(0.008)ESRADEVAPAKK;T(0.001)AS(0.992)FS(0.007)ESRADEVAPAKK;T(0.034)AS(0.931)FS(0.034)ESRADEVAPAKK;T(0.025)AS(0.974)FS(0.001)ESRADEVAPAKK 171.47 1.5355e-30 670465000.0 8433.4 10759.0 14000.9 12430.6 20959.1 9654.4 11569.199999999999 8561.2 34897.2 45143.200000000004 46114.700000000004 True False 9856.751743165849 11306.587144595444 15986.438149955475 15476.09755803084 17876.04415435189 10676.022199927938 13671.173885849563 9774.776317575403 26993.039919377217 34945.31976668596 34663.147289026696 0.2843582454004746 0.3261846666812845 0.4611940749828074 0.44647121708218646 0.5157074747223229 0.3079934464954844 0.3944008249411744 0.28199332957483064 0.7787244387910037 1.008140417120998 1.0 15.081115031512354 -8.92288544612895 3.022426404671487 0.9111358993462441 0.38331911975091065 0.8872487538624788 0.08793006807386197 0.06334227114446958 1.1144467968621081 0.018355946039732954 0.019015988396965538 1.194303084288656e-09 8.92288544612895 -0.5278167795953335 down TAS(ph)FSESRADEVAPAKK ddPTM_A549_PD325901_60min_R1 7 TASFSESRADEVAPAKK 17 2 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.001)AS(0.847)FS(0.153)ESRADEVAPAKK;T(0.006)AS(0.956)FS(0.031)ES(0.007)RADEVAPAKK;T(0.012)AS(0.957)FS(0.025)ES(0.005)RADEVAPAKK;T(0.16)AS(0.831)FS(0.008)ES(0.001)RADEVAPAKK;T(0.002)AS(0.978)FS(0.018)ES(0.003)RADEVAPAKK;T(0.157)AS(0.838)FS(0.004)ES(0.001)RADEVAPAKK;T(0.005)AS(0.966)FS(0.027)ES(0.001)RADEVAPAKK 211.75 1.1079000000000001e-55 571569800.0 69847.59999999999 69235.0 74267.90000000001 87356.3 95766.20000000001 120921.8 100108.5 109042.90000000001 104998.7 101444.20000000001 108174.6 True False 76938.47693291439 75069.67643025368 79308.16630316297 92752.10025044825 89039.91248745468 119937.05295229513 103918.18374897323 106867.95381699996 100585.96978181493 95038.9958994245 94869.80997528792 0.8109901026781401 0.7912915230863026 0.8359684321473975 0.9776777277682827 0.9385484435000784 1.2642278189820009 1.0953767460485297 1.1264695675561842 1.0602526747762642 1.0017833484032554 1.0 16.533661436992205 -6.424443151661725 1.661987444499421 1.0559530539629174 0.7984131076030109 0.67738051170337 0.07813224229290054 0.18944098069822443 1.0076027549409756 0.012211509140820375 0.038514666598565644 3.763196085793214e-07 6.424443151661725 -0.2575399463599065 TAS(ph)GS(ph)SVTSLDGTR ddPTM_A549_PD325901_60min_R1 1 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 2 T(0.028)AS(0.966)GS(0.574)S(0.415)VT(0.015)S(0.002)LDGTR 101.43 3.3985999999999996e-05 9884800.0 1379.7 1230.1 1147.8 1357.3 1758.9 1608.8 1282.0 1248.2 1632.6 1431.4 1540.9 True False 1519.7661283185425 1333.764844036326 1225.6966102821048 1441.137338348045 1635.3609318755884 1595.6984661959407 1330.7872115373184 1223.303671806042 1563.987499519433 1341.0211597157472 1351.3790685698964 1.1246038684962336 0.9869657411874739 0.9069968884298351 1.0664197573173424 1.2101422686724141 1.1807926460520042 0.9847623383316352 0.9052261502767016 1.1573270120089476 0.9923353046565162 1.0 10.400216699249771 -6.4863127608194775 24.802800980660443 1.0744814832810334 1.001340139967062 0.04849956823603441 0.09993765857301758 1069.8237714626757 725663.5241266878 0.014888870359490254 0.03458889053187521 3.263527218699536e-07 6.4863127608194775 -0.07314134331397137 TAS(ph)GSS(ph)VTSLDGTR ddPTM_A549_MK2206_60min_R1 1 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 2 T(0.087)AS(0.912)GS(0.043)S(0.921)VT(0.029)S(0.006)LDGT(0.002)R 74.789 0.001037 5631300.0 693.0 566.57 745.74 728.48 1171.2 724.98 738.42 827.15 1220.7 1048.9 1331.9 True False 809.96145777669 595.4059929838685 851.4971456083397 906.9576327027094 998.9180314792591 801.6969023972241 872.5813557367011 944.4010455406357 944.2133990573393 811.9527615073124 1001.1524714300356 0.8090290748818206 0.5947205944898651 0.8505169491237136 0.9059135931685018 0.9977681322130836 0.8007740332020444 0.8715768882738861 0.943313903217622 0.9431264727425932 0.8110180863335709 1.0 9.967445992127592 -3.1681417025611625 0.21957630407388495 0.9979232316903319 3.28953706818148e-12 0.23081515923096085 0.09651844962523745 15.859037620382766 0.28733809768573737 0.05271129303103176 5.09957067885489 0.0006789820567084132 3.1681417025611625 -0.9979232316870423 TAS(ph)GSS(ph)VTSLDGTR ddPTM_A549_PD325901_60min_R1 1 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 2 T(0.263)AS(0.728)GS(0.263)S(0.736)VT(0.008)S(0.001)LDGTR 113.53 5.6e-06 9503500.0 1016.3 1114.5 1145.3 1201.8 1405.7 1153.6 849.76 1174.8 1455.8 1330.6 1275.8 True False 1119.4740278394836 1208.4228263380908 1223.0269452483835 1276.032456514168 1306.9684814017369 1144.2054640748613 882.0980818065141 1151.3676923872292 1394.6177886808703 1246.5856889183833 1118.8846879625376 1.0005267208348514 1.080024455905818 1.0930768455465116 1.1404503701250865 1.1680993541717828 1.0226303714625251 0.7883726458110655 1.029031592597663 1.2464356726701087 1.1141324055371482 1.0 10.127845644768326 TAS(ph)GSSVTS(ph)LDGTR ddPTM_A549_PD325901_60min_R1 1 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 2 T(0.085)AS(0.762)GS(0.079)S(0.058)VT(0.061)S(0.951)LDGT(0.003)R 72.615 0.0015413 4690300.0 1346.7 1424.6 1340.7 1429.4 1762.6 1736.4 1253.1 1220.0 1645.6 1249.5 1533.1 True False 1483.4159926118582 1544.6560416341354 1431.6879642840365 1517.6907915970644 1638.8010566398955 1722.259334101586 1300.7874062226304 1195.6661429285148 1576.4411547281507 1170.6063567589965 1344.5384191216224 1.1032901488831859 1.148837414882684 1.0648174450971422 1.1287820191769316 1.2188577383385688 1.2809298043165818 0.9674601987739597 0.8892762943208683 1.1724775821266815 0.8706380867299764 1.0 10.392895264331289 -7.774969420078372 24.999734864294485 1.0582746091704138 1.1544472200312503 0.3156477466721851 0.10442079583540517 322.43084954982726 595760.7910001879 0.016212637484261123 0.02246786144900129 1.6789222316963048e-08 7.774969420078372 0.0961726108608365 TAS(ph)GSSVTSLDGTR ddPTM_A549_MK2206_60min_R1 2 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 1 T(0.008)AS(0.979)GS(0.013)SVTSLDGTR;T(0.112)AS(0.776)GS(0.112)SVTSLDGTR 355.05 2.770299999999999e-204 381990000.0 13102.4 13668.1 13283.7 12517.7 18090.7 14988.099999999999 13005.8 12319.9 21745.0 19384.5 22642.0 True False 15313.764797075462 14363.747908824707 15167.528405499907 15584.537061940917 15429.58199460538 16574.13079370443 15368.785510197966 14066.283553111383 16819.792219629588 15005.527986880059 17019.366512590186 0.8997846533093348 0.8439648971775202 0.8911923010929713 0.9156943092101668 0.9065896773062174 0.9738394658487206 0.9030174829849752 0.8264869049447733 0.9882736943932101 0.8816737083474654 1.0 14.05488971820944 -8.869795662229365 9.139442694396207 0.9948034591489838 0.8972608159342912 0.1260143184660366 0.04959095290513288 0.1359413423253282 10.660306784076905 0.006399085739146601 0.006803758601623236 1.3495977258506155e-09 8.869795662229365 -0.09754264321469264 TAS(ph)GSSVTSLDGTR ddPTM_A549_PD325901_60min_R1 2 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 1 T(0.001)AS(0.499)GS(0.499)S(0.001)VTSLDGTR;T(0.078)AS(0.458)GS(0.458)S(0.006)VTSLDGTR 259.72 2.6595999999999995e-70 429410000.0 34520.0 32379.0 34211.0 32303.0 40019.0 34087.0 35426.0 35104.0 33611.0 40119.0 43108.0 True False 38024.44498771912 35107.69196411038 36532.76418745522 34298.28294456411 37208.20349805513 33809.40677350885 36774.15581585104 34403.82318144475 32198.446555401 37585.87949324864 37805.989284126874 1.005778335859709 0.9286277817057575 0.9663221325303019 0.9072182369517969 0.984188066563233 0.8942870538162052 0.9727071427619258 0.910009864386473 0.8516758102378175 0.9941779121497385 1.0 15.206327186113118 -7.256255091456753 24.879245578458228 0.927997787203447 0.9543650978535668 0.024987299231479798 0.048061528117887525 1194.585338013028 5732769.575744212 0.00865822988993079 0.014697419959770952 5.5430003822687584e-08 7.256255091456753 0.02636731065011977 TAS(ph)ISSSPSEGTPTVGSYGCTPQSLPK ddPTM_A549_PD325901_60min_R1 1 TASISSSPSEGTPTVGSYGCTPQSLPK 27 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 T(0.203)AS(0.726)IS(0.059)S(0.005)S(0.006)PSEGTPTVGSYGCTPQSLPK 79.286 1.4513e-06 3689800.0 1490.1 1513.8 1523.9 2281.5 2264.2 2390.1 1993.9 2085.5 1925.4 1930.2 2470.7 True False 1641.3738550463574 1641.3732386815618 1627.3210179551318 2422.4230733375566 2105.1704030659535 2370.635818035128 2069.7789556039447 2043.9030664568986 1844.4821337588598 1808.3268425900064 2166.819563057722 0.7575037086752723 0.7575034242192862 0.7510182415275626 1.1179625265701119 0.9715485492918607 1.094062403004055 0.9552151876841846 0.9432733123253839 0.8512393764601269 0.834553496479501 1.0 11.08136330596626 -6.2237885270842375 24.469077162651498 0.955939183573845 0.7555578273533429 0.5758332888327218 0.08168691183179427 270.39391760632884 175726.97175484116 0.0119827315843518 0.031702369657821666 5.973260743845253e-07 6.2237885270842375 -0.20038135622050213 TAS(ph)LNQRPR ddPTM_A549_MK2206_60min_R1 2 TASLNQRPR 9 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 T(0.001)AS(0.999)LNQRPR;TAS(1)LNQRPR 107.11 3.602e-05 149490000.0 7097.6 8175.8 6933.7 5712.2 8281.2 6636.4 5823.9 6341.9 9350.0 9111.2 8298.8 True False 8295.501360340308 8591.913298334737 7917.002921265514 7111.689256430405 7063.046450039307 7338.659443114205 6882.027244217344 7240.883746254195 7232.239928881883 7052.973591996782 6237.978924771811 1.3298379908591567 1.3773552943911291 1.269161537212972 1.1400630464121928 1.1322651992283987 1.176448258581229 1.103246312181007 1.1607739996523105 1.159388323702367 1.130650436151447 1.0 12.606862963187144 -2.0000000000000004 0.1456200347165525 0.996281559997796 2.282489969035161 0.701929453723461 0.055763958657639966 23.943255583896917 0.21958668323412442 0.11433724887014653 6.517360679637757 0.00999999999999999 2.0000000000000004 1.286208409037365 TAS(ph)LNQRPR ddPTM_A549_PD325901_60min_R1 3 TASLNQRPR 9 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TAS(1)LNQRPR;TAS(1)LNQRPR;TAS(1)LNQRPR 133.91 1.3002e-05 403882000.0 14251.099999999999 13980.0 14785.0 15336.5 18956.4 16550.1 16209.800000000001 17270.8 15716.1 17841.899999999998 18653.4 True False 15697.861180894672 15158.143662814273 15788.399009427529 16283.800773281351 17624.967860029785 16415.321472768173 16826.672809342916 16926.32034531951 15055.606971209947 16715.359389082296 16359.150053645075 0.9595768196647199 0.9265850373098571 0.9651112042895912 0.9953940589751523 1.0773767464833948 1.0034336392134615 1.0285786702955066 1.0346699119339675 0.920317187741384 1.0217743179975205 1.0 13.997810173963284 -5.9925917040185315 5.562276581175199 0.9843403544449238 0.9432663654975146 0.12189614493317624 0.04256212914875884 0.3068855824255807 32.64819653998989 0.007159416905487669 0.021787564605111973 1.0172045543457853e-06 5.9925917040185315 -0.04107398894740921 TAS(ph)LPGYGR ddPTM_A549_MK2206_60min_R1 2 TASLPGYGR 9 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.088)AS(0.911)LPGY(0.001)GR;T(0.1)AS(0.9)LPGYGR 106.16 0.0005384 96978000.0 8414.9 8264.2 7145.799999999999 7292.7 10547.0 8266.6 8360.400000000001 8424.400000000001 12935.2 12158.7 13505.0 True False 9835.129395447431 8684.812480747814 8159.18189058931 9079.411827381744 8995.55027152642 9141.366125075025 9879.376461229538 9618.584498642975 10005.397853269842 9412.041225416117 10151.335780961497 0.9688507608912809 0.8555339581058781 0.8037545074502995 0.8944056253571956 0.8861444903041512 0.90050869386267 0.9732095040889092 0.9475190956329431 0.9856237710149085 0.927172682344731 1.0 13.309381958957074 -7.838523046590358 0.9874087174063366 0.9936128232498859 0.8723929793206847 0.4287592453937912 0.043558583062175166 0.22439167022090098 0.44044933047949886 0.006964802563994788 0.011451512794926419 1.4503638061904507e-08 7.838523046590358 -0.12121984392920115 TAS(ph)LPGYGR ddPTM_A549_PD325901_60min_R1 2 TASLPGYGR 9 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.064)AS(0.936)LPGYGR;T(0.043)AS(0.957)LPGYGR 128.58 5.1058999999999993e-05 185854000.0 12526.599999999999 12736.6 12168.599999999999 13416.9 14282.4 13066.8 12888.5 15300.0 14147.8 15696.699999999999 14090.0 True False 13798.291210404468 13809.957981101588 12994.434371736206 14245.631441009275 13279.253495605153 12960.38831308373 13378.978920357813 14994.829497382196 13553.217166299784 14705.607683184418 12357.019323869064 1.1166358851403115 1.117580026311523 1.0515832363097384 1.15283719055874 1.0746324131706004 1.0488280363897453 1.082702759436065 1.2134665411114058 1.0968031052699028 1.1900610736101038 1.0 13.593043167673274 -10.354494813346644 0.9117844560099396 1.004598549594103 1.1046319961574071 0.0 0.07104430695887554 0.39855095207791635 0.6359566357824793 0.023257019558770842 0.008558050554848741 4.420843965301587e-11 10.354494813346644 0.10003344656330415 TAS(ph)LTSAASVDGNR ddPTM_A549_PD325901_60min_R1 1 TASLTSAASVDGNR 14 0 G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36 G3V578 NDRG2 Protein NDRG2 1 T(0.001)AS(0.482)LT(0.482)S(0.036)AASVDGNR 258.0 5.1714999999999985e-70 26410000.0 6724.3 6736.6 6348.6 8784.7 8594.7 7445.8 6315.0 7466.5 8851.8 9723.8 10141.0 True False 7406.9459858319715 7304.316924099759 6779.45417323312 9327.310967498765 7991.037922105363 7385.163873447124 6555.320780700596 7317.574800144059 8479.789628963685 9109.837608525911 8893.721289095543 0.8328286602497332 0.8212891641944605 0.7622741879201124 1.048752334856146 0.8985032993897676 0.8303795040780019 0.7370728818248414 0.8227798648374586 0.9534579905669661 1.0242998754295736 1.0 13.118571478969223 -8.86912390953172 4.245485307247235 0.9801036877490077 0.8454466101540373 0.4179208986353693 0.07797209399665367 0.1747007704433521 5.481246181849598 0.014331659509710333 0.01514555179395075 1.3516868553679941e-09 8.86912390953172 -0.13465707759497036 TAS(ph)LVTR ddPTM_A549_MK2206_60min_R1 4 TASLVTR 7 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 T(0.024)AS(0.966)LVT(0.009)R;T(0.141)AS(0.843)LVT(0.016)R;T(0.027)AS(0.956)LVT(0.017)R;T(0.039)AS(0.908)LVT(0.053)R 96.66799999999999 0.011739 216322700.0 12515.199999999999 14463.8 13465.0 11294.36 17556.0 13197.000000000002 12582.0 12665.5 18629.199999999997 19629.399999999998 19864.7 True False 14627.459792737121 15199.94564011522 15374.539471687578 14061.478707023096 14973.535656292574 14593.497780540385 14867.986535954018 14460.873411466997 14409.71594471941 15195.10490678962 14931.746752170751 0.9796214760078628 1.0179616552835975 1.029654448797322 0.9417169297342163 1.002798661457056 0.9773469924688354 0.9957298889892127 0.9684649526596545 0.9650388654377995 1.0176374645907105 1.0 13.86609532488051 -6.230202684645932 24.999176359035122 0.981664499258912 1.0099674345472445 0.19517624317274185 0.02278792960409238 706.5613272503574 565470.9125131272 0.002850303173512513 0.007540423698110193 5.885689069372726e-07 6.230202684645932 0.028302935288332498 TAS(ph)LVTR ddPTM_A549_PD325901_60min_R1 2 TASLVTR 7 0 Q7L7X3;Q7L7X3-3;Q7L7X3-2 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 1 T(0.002)AS(0.997)LVT(0.001)R;T(0.089)AS(0.899)LVT(0.011)R 107.1 0.0093402 298270000.0 13041.0 13369.1 14224.400000000001 14210.3 15596.5 13720.0 15226.3 16356.1 14773.1 15557.8 16133.2 True False 14364.912719723212 14495.760975860523 15189.753322265871 15088.03795706714 14501.055645004048 13608.268868851503 15805.745178651072 16029.864754387778 14152.237981839107 14575.477852889242 14148.918676781006 1.0152657632626485 1.024513696558925 1.0735628403316022 1.066373925933101 1.024887906720456 0.9617886129477348 1.1170991607004563 1.1329392104495932 1.0002345977903986 1.0301478286682246 1.0 13.788404179655657 -8.915963034024582 24.80453718813513 1.0000876697373036 1.0515843611187996 0.1313868461491018 0.046067262490314356 27.938668589607314 8243.08585158048 0.008041945348892668 0.008561283580605516 1.2134921352481654e-09 8.915963034024582 0.05149669138149604 TAS(ph)NPKVENEDEPVR ddPTM_A549_MK2206_60min_R1 3 TASNPKVENEDEPVR 15 1 Q9UBF8-2 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 T(0.008)AS(0.992)NPKVENEDEPVR;T(0.004)AS(0.996)NPKVENEDEPVR;T(0.167)AS(0.833)NPKVENEDEPVR 169.84 9.9276e-28 215630300.0 12356.2 12450.0 12590.9 11151.6 17924.9 14268.0 11705.6 12880.2 19489.2 20163.0 21244.8 True False 14441.624479913906 13083.651821750462 14376.478947944383 13883.74250061434 15288.170954971452 15777.830289668127 13832.356000259371 14706.007793958179 15074.9273178572 15608.164296188328 15969.129833348456 0.90434636267753 0.8193090016982498 0.9002668960660506 0.8694113358400289 0.9573577968565982 0.9880206657672207 0.8661934710664796 0.9209022625169914 0.9440043055054956 0.9773960421809383 1.0 13.96299808119555 -2.0000001817819215 0.043885179722569494 1.2185139627587687 0.39111097086043867 0.45819766099206816 0.03998136314904395 280.8217765755487 0.909838046295483 4.376743058414565 16.418903364161363 0.00999999581431745 2.0000001817819215 -0.82740299189833 TAS(ph)PLPLRPDAPVEK ddPTM_A549_MK2206_60min_R1 5 TASPLPLRPDAPVEK 15 1 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.202)AS(0.798)PLPLRPDAPVEK;T(0.037)AS(0.963)PLPLRPDAPVEK;T(0.425)AS(0.575)PLPLRPDAPVEK;T(0.212)AS(0.788)PLPLRPDAPVEK;T(0.054)AS(0.946)PLPLRPDAPVEK 133.92 4.9058e-10 213610300.0 20388.2 21248.6 20637.1 19270.699999999997 29375.0 23387.000000000004 22858.4 22287.100000000002 31339.7 30018.800000000003 30318.500000000004 True False 23829.229716367536 22330.06297989131 23563.751097747012 23992.022365094585 25053.976412827193 25861.796816965838 27011.47539607784 25446.364676381207 24241.307989217075 23237.532231037967 22789.57970196826 1.0456195343659402 0.9798365424862459 1.0339704112977515 1.0527628275225485 1.099361056257802 1.1348079760651417 1.1852555312261834 1.1165789369157821 1.063701406793537 1.019656024153487 1.0 14.476086697418237 -6.134302099641845 3.307107583523968 1.0616371500497015 1.0119208872762724 0.13650597372684337 0.05474190121132059 0.5192267363828427 10.541928068686559 0.00957930287563251 0.028562035150752323 7.3400311053308e-07 6.134302099641845 -0.04971626277342911 TAS(ph)PLPLRPDAPVEK ddPTM_A549_PD325901_60min_R1 2 TASPLPLRPDAPVEK 15 1 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.421)AS(0.579)PLPLRPDAPVEK;T(0.007)AS(0.993)PLPLRPDAPVEK 145.71 3.5067e-14 279670000.0 10358.3 9867.7 9964.8 11220.7 13238.7 11299.1 11534.5 10626.8 11675.0 10977.0 10565.2 True False 11409.866990622564 10699.285709696167 10641.07125121024 11913.777154941357 12308.85938303562 11207.083875804661 11973.45170942059 10414.840137436677 11184.340350906145 10283.910346653462 9265.747378320897 1.2314027703062864 1.154713729270164 1.1484309701888908 1.2857869601340595 1.3284259629001653 1.2095175292633076 1.292227299163683 1.1240151185002427 1.2070629485403612 1.1098846025863778 1.0 13.177691633878524 -10.563129830413152 0.5311523575559114 0.9675691945787321 1.2286908436801502 0.45453639717306005 0.06718193353410792 0.6228715816577546 0.2606435944419824 0.08051518060728803 0.014672744679122737 2.7344511520386392e-11 10.563129830413152 0.2611216491014181 TAS(ph)PPALPK ddPTM_A549_MK2206_60min_R1 3 TASPPALPK 9 0 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 T(0.023)AS(0.977)PPALPK;T(0.01)AS(0.99)PPALPK;T(0.003)AS(0.997)PPALPK 97.456 0.00086238 18648800.0 6929.0 8273.1 7962.3 6969.900000000001 9932.8 7541.700000000001 7561.8 7094.999999999999 11457.8 11516.699999999999 11274.5 True False 8098.445802214546 8694.165452732832 9091.473868207799 8677.525812890706 8471.698277900596 8339.757688224707 8935.681178475379 8100.737977526221 8862.626594346828 8915.069471304474 8474.730489629803 0.9555992148805557 1.025892854453784 1.0727743943400536 1.0239294126826872 0.9996422055270173 0.9840734992610967 1.0543911914850417 0.9558696866453485 1.0457709074278738 1.0519590542983634 1.0 13.048951773565102 -11.360683242673467 2.032554049132445 0.9998484826928721 1.0199026740842498 0.0 0.03960341282867695 1.0827393754633274 8.082693252679482 0.027882658491940583 0.0052568279576134 4.358296347969684e-12 11.360683242673467 0.020054191391377763 TAS(ph)PPALPK ddPTM_A549_PD325901_60min_R1 2 TASPPALPK 9 0 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 T(0.023)AS(0.977)PPALPK;T(0.41)AS(0.59)PPALPK 136.52 4.4469e-05 49308000.0 12067.0 13016.1 12592.099999999999 13898.9 16250.400000000001 14624.6 12215.7 13952.2 14887.9 15710.900000000001 15201.4 True False 13292.032956744108 14113.012427006915 13446.675628448591 14757.403486307841 15109.02796483658 14505.502106370679 12680.575148187532 13673.912425710841 14262.213337066856 14718.911092761038 13331.72416961413 0.9970227997245482 1.0586036920245852 1.0086224000265818 1.1069388549114405 1.1333138739303734 1.0880439710440335 0.9511579287763314 1.0256672169138206 1.0697951109409773 1.1040515769377082 1.0 13.702575753381893 -10.960629572858501 1.018119949790076 0.9974710075799408 1.051558865789547 0.0 0.05837930489515364 1.1027055993138892 1.8658581838216686 0.04629819936682156 0.008849909059127305 1.0948898434739547e-11 10.960629572858501 0.054087858209606154 TAS(ph)PPGPPPYGK ddPTM_A549_MK2206_60min_R1 3 TASPPGPPPYGK 12 0 P54259 P54259 ATN1 Atrophin-1 1 TAS(1)PPGPPPYGK;T(0.002)AS(0.998)PPGPPPYGK;T(0.001)AS(0.999)PPGPPPYGK 150.06 3.5552e-12 24153300.0 11669.499999999998 14016.099999999999 12281.6 14355.099999999999 18409.3 14048.400000000001 11847.2 11811.8 24817.0 20041.4 22213.199999999997 True False 13639.026308117007 14729.459622396525 14023.315557035132 17872.100144424927 15701.316356652243 15534.992363426802 13999.682887359286 13486.158822120387 19195.98912460554 15514.033820643195 16697.04938686812 0.8168524864545119 0.8821594331499635 0.8398678851644398 1.0703747548642313 0.9403647310884162 0.9304034505428695 0.8384525051695507 0.8076971271778696 1.1496635531127306 0.9291482262036465 1.0 14.02730555943241 -8.763294652277976 24.999956745775822 1.0706744562589294 0.8960046621602271 0.28397144263587626 0.08818290989514942 32.61732151860659 439520.27102375816 0.01524098953425594 0.016633496657299653 1.7246673737818305e-09 8.763294652277976 -0.1746697940987023 TAS(ph)PPGPPPYGK ddPTM_A549_PD325901_60min_R1 2 TASPPGPPPYGK 12 0 P54259 P54259 ATN1 Atrophin-1 1 T(0.012)AS(0.988)PPGPPPYGK;T(0.062)AS(0.938)PPGPPPYGK 161.93 4.4769e-14 62506000.0 23580.0 26228.0 26675.0 28336.0 28887.0 28888.0 25537.0 28278.0 29335.0 30022.0 30916.0 True False 25973.824241321483 28438.325607174003 28485.325909805855 30086.2503642748 26858.07677473995 28652.745705785877 26508.824509382594 27713.973106338166 28102.151965210414 28126.40579641341 27113.527992671094 0.9579654941379198 1.0488611299444695 1.0505945931309848 1.109639821583058 0.9905784589154096 1.0567693630106285 0.9776973515415642 1.022145591449013 1.0364623878090136 1.0373569165921934 1.0 14.726725227375566 -7.718961010710885 24.999355259736685 1.015408911014272 1.0383136446099253 0.06372634950973954 0.03937527507226223 308.39297706140866 181494.5512822463 0.00580833298858554 0.008615086023758227 1.910024725546839e-08 7.718961010710885 0.02290473359565315 TAS(ph)PPPPPK ddPTM_A549_MK2206_60min_R1 2 TASPPPPPK 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.01)AS(0.99)PPPPPK;T(0.015)AS(0.985)PPPPPK 114.4 0.00021840000000000002 265320000.0 31686.0 31374.0 27804.0 26439.0 37032.0 29802.0 27199.0 28233.0 41638.0 43480.0 45561.0 True False 37033.82215167703 32970.80259081118 31747.025285614644 32916.5561868918 31584.64185599375 32955.62785903348 32140.70623044139 32235.114209936277 32207.059482222878 33657.83780182854 34246.946280369266 1.0813758940284037 0.9627370078747843 0.9270030976108488 0.961153030037015 0.9222615528234241 0.9622939105062344 0.9384984566891093 0.9412551398316586 0.9404359506553822 0.9827982187457568 1.0 15.06368773163489 -3.6897074876543305 9.283425245443603 0.9651879937619839 0.964439983074066 0.0 0.04290669592020366 0.0 0.0 0.005604032841594589 0.0 0.0002043113588971305 3.6897074876543305 -0.000748010687917966 TAS(ph)PPPPPK ddPTM_A549_PD325901_60min_R1 3 TASPPPPPK 9 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.013)AS(0.987)PPPPPK;T(0.04)AS(0.96)PPPPPK;T(0.012)AS(0.988)PPPPPK 122.96 0.00010654 418819000.0 37419.7 37451.7 39102.2 37072.0 45372.6 40546.7 39027.8 39216.4 41910.7 42455.1 45529.4 True False 41218.520397072825 40607.88619575256 41755.91043263019 39361.85324337927 42185.78510297246 40216.50111841553 40513.0242858316 38434.198137329346 40149.33902738518 39774.47774056731 39929.572434646114 1.0322805350479616 1.0169877541818575 1.0457389820783405 0.9857819867168364 1.0565048041027525 1.007185869176011 1.014612023510656 0.9625497042382738 1.005503855396868 0.9961157937683242 1.0 15.285170003242968 -7.652994469201259 2.7932030941586783 0.999638976259623 1.0257696125361002 0.330988607660767 0.020852439222977373 0.2655684238142393 4.203282097487162 0.002994959097748206 0.0045837354697519025 2.2233382049827088e-08 7.652994469201259 0.02613063627647727 TAS(ph)PPPPPKR ddPTM_A549_MK2206_60min_R1 2 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 TAS(1)PPPPPKR;T(0.404)AS(0.596)PPPPPKR 114.86 3.8723e-05 719290000.0 19240.0 20458.1 19352.5 16818.9 23983.0 17993.6 17164.0 17997.9 26479.0 26113.0 28314.0 True False 22487.241627162344 21499.32990638983 22096.975501361583 20939.531255029106 20455.132470087985 19897.670808815 20282.476625585346 20549.157441257095 20481.54877827416 20214.055163733858 21282.852373353875 1.056589654087737 1.0101714530194734 1.0382525384157149 0.983868651048174 0.9611086010114793 0.9349156052845097 0.9529961618762625 0.9655264755294095 0.9623498025065969 0.9497812985369315 1.0 14.377403896418745 -6.333404234579085 4.300579296726921 0.9734456453682547 1.032710378199935 0.6904460000717696 0.020560965015803987 0.12756355958318993 4.53764203223044 0.0033828749673521447 0.008286951943568046 4.640831127534534e-07 6.333404234579085 0.05926473283168021 TAS(ph)PPPPPKR ddPTM_A549_PD325901_60min_R1 3 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 TAS(1)PPPPPKR;T(0.002)AS(0.998)PPPPPKR;T(0.01)AS(0.99)PPPPPKR 113.22 4.7373e-05 969831000.0 22500.9 24004.3 23946.2 24405.3 28187.4 24049.2 24847.7 26882.7 26648.1 27337.3 28429.0 True False 24785.174803712915 26027.226604098163 25571.33313219842 25912.759952542194 26207.614265250984 23853.351288686852 25793.292820683157 26346.50345942982 25528.17302826398 25611.218212587188 24932.413226279157 0.9940944977435617 1.0439112478957735 1.0256260755876543 1.0393201699877865 1.0511463141332722 0.9567205176731566 1.0345285306556935 1.0567169419308433 1.0238949914947215 1.0272258036214705 1.0 14.60573490863194 -10.36142810020055 0.942137740750204 1.0012666761998152 1.0256371709880698 0.0 0.0280078447425598 0.9066943608624772 1.5513232790066074 0.013022694176462178 0.004892307883971309 4.35082784975808e-11 10.36142810020055 0.024370494788254593 TAS(ph)PWK ddPTM_A549_MK2206_60min_R1 2 TASPWK 6 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2;A0A1B0GTD1 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 T(0.086)AS(0.914)PWK;T(0.093)AS(0.907)PWK 108.7 0.025462000000000002 577760000.0 11929.0 9691.3 7420.799999999999 7850.3 16375.8 12658.599999999999 11192.1 12271.599999999999 17148.4 15690.6 17652.0 True False 13942.323563951137 10184.545775110862 8473.181025733318 9773.623852413355 13966.941512891082 13998.12464990137 13225.559697111035 14011.136880198836 13264.314780367718 12146.082562405032 13268.521229584047 1.0507820218024562 0.7675720299865049 0.6385927172382376 0.7366023450014668 1.0526373867307692 1.0549875459135996 0.9967621461555775 1.055968230201797 0.9996829752808513 0.9154058958223333 1.0 13.695719971536732 -6.7624746823860535 24.999865705135175 1.011213033399244 0.7847722733029832 0.5090452707809041 0.10001254738641578 15.27475669292264 368860.89409783354 0.013409521919712463 0.026411723276241795 1.7279267087189058e-07 6.7624746823860535 -0.2264407600962608 TAS(ph)PWK ddPTM_A549_PD325901_60min_R1 2 TASPWK 6 0 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2;A0A1B0GTD1 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 T(0.278)AS(0.722)PWK;T(0.064)AS(0.936)PWK 66.429 0.056027 798570000.0 27890.0 22873.0 24050.7 23637.8 22990.0 23068.6 21868.7 19612.0 29157.0 25007.4 33755.0 True False 30721.37226846715 24800.587982800476 25682.92513060795 25097.853220661178 21375.261711194355 22880.73696996994 22700.925345511805 19220.823274683626 27931.63268619875 23428.42849621042 29603.34899057489 1.037766783692217 0.8377629163070869 0.8675682315127548 0.8478045247060334 0.722055525474493 0.7729104223057569 0.7668363924885432 0.6492786772470625 0.9435294869878276 0.7914114211763528 1.0 14.853472774957362 -8.968985278877643 20.21183954773272 0.9750875515722246 0.809802504621474 0.0734586810169302 0.10810879416857007 16.659420492133908 10857.028353743524 0.016437254106295655 0.017299840534525792 1.074025817587385e-09 8.968985278877643 -0.16528504695075064 TAS(ph)QEGCQELTQEQR ddPTM_A549_MK2206_60min_R1 2 TASQEGCQELTQEQR 15 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 T(0.015)AS(0.985)QEGCQELTQEQR;T(0.14)AS(0.86)QEGCQELTQEQR 79.771 0.00043127 3811600.0 1070.6399999999999 1157.18 971.8499999999999 1241.62 1473.81 840.85 1002.31 1099.81 1437.56 1199.4 1767.04 True False 1251.3378573651298 1216.0755192845945 1109.6729435989278 1545.8169557384392 1257.014501344302 929.8281888889431 1184.4167528892126 1255.7114355268661 1111.954955311598 928.4547069805232 1328.2352001769877 0.942105627977928 0.9155573644807427 0.83544913088515 1.1638126707773282 0.9463794523566342 0.7000478445120587 0.891722153374183 0.9453984018489664 0.8371672089125703 0.6990137792288642 1.0 10.37529492237409 -5.257049399487426 19.30947809286454 0.9179206334516328 0.942105788083671 0.0 0.1272678714363242 184.15733926776923 809091.9770706377 0.015305380008923031 0.15374687937054804 5.532871711441805e-06 5.257049399487426 0.024185154632038186 TAS(ph)QEGCQELTQEQR ddPTM_A549_PD325901_60min_R1 2 TASQEGCQELTQEQR 15 0 A0A0C4DG33;O43933-2;O43933 A0A0C4DG33 PEX1 Peroxisome biogenesis factor 1 1 T(0.002)AS(0.998)QEGCQELTQEQR;T(0.004)AS(0.996)QEGCQELTQEQR 103.61 6.0333e-06 3628900.0 1348.78 1200.27 1624.69 1252.1100000000001 1203.54 918.21 1261.06 1550.3600000000001 1434.49 1214.6100000000001 1213.06 True False 1485.7071526806428 1301.4209652479308 1734.9512334546373 1329.4499909518681 1119.0075023875982 910.7324021915554 1309.0503283785101 1519.4368535661088 1374.2033738733492 1137.919317313361 1063.861310220909 1.3965233422880452 1.2232994590034418 1.6308058360486646 1.2496459624758889 1.0518358846560913 0.8560630915344063 1.230470847846406 1.4282283216508742 1.2917128959112143 1.0696124639376856 1.0 10.055094371499237 -14.114866132888256 0.25442428691549124 9.555654723382862e-19 1.2882951134951413 0.17272716390543064 0.1902278038396171 37.40622222680659 0.7211897161491622 18.972757258945666 0.10436172756156951 7.675980576445588e-15 14.114866132888256 1.2882951134951413 TAS(ph)QGPQTDSVIQNSENIK ddPTM_A549_MK2206_60min_R1 2 TASQGPQTDSVIQNSENIK 19 0 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 T(0.003)AS(0.642)QGPQT(0.355)DSVIQNSENIK;T(0.013)AS(0.982)QGPQT(0.005)DSVIQNSENIK 190.67 7.4984e-44 15527300.0 2122.1 3058.6 2389.17 1794.38 6640.9 5450.6 4351.2 4837.5 7896.1 6494.5 7731.7 True False 2480.2585996362372 3214.2696756631312 2727.9902316800435 2234.0031805527797 5664.032407147034 6027.378874184544 5141.7567171549135 5523.230439222423 6107.645957480669 5027.387939373858 5811.705505935585 0.42676949083244337 0.5530682296927034 0.46939581313848483 0.3843971753680839 0.9745904023117258 1.0371101680958692 0.884724236612395 0.9503630962686361 1.0509214465947792 0.8650451978751003 1.0 12.504745884416973 -6.768969238742267 24.549298023011325 1.0063298079637253 0.4659539949705716 0.9178990456845857 0.07239570132017875 20.547965856190487 66992.02015696821 0.008933946237106047 0.017125107291598957 1.7022790772558593e-07 6.768969238742267 -0.5403758129931537 TAS(ph)QGPQTDSVIQNSENIK ddPTM_A549_PD325901_60min_R1 2 TASQGPQTDSVIQNSENIK 19 0 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 TAS(0.81)QGPQT(0.19)DSVIQNSENIK;TAS(0.805)QGPQT(0.195)DSVIQNSENIK 288.78 2.3054e-143 30259000.0 5237.0 6376.9 5958.6 5617.6 7698.5 6955.8 6699.5 6635.5 6551.9 7375.1 7309.9 True False 5768.656384724365 6914.303742732499 6362.9864279726 5964.586393504737 7157.783918383202 6899.1542709881405 6954.453138607067 6503.149747050954 6276.54642784599 6909.4349273575635 6410.828641273982 0.8998300699514561 1.0785351051527194 0.9925372809072815 0.930392423079871 1.1165146221972302 1.0761719985104947 1.0847978518460375 1.0144008069694133 0.9790538445274516 1.0777756377503949 1.0 12.646295131270808 -3.7178465948748793 12.523320827211181 1.0072922596152143 0.6010284039222843 0.0 0.06829417812573953 0.0 0.0 0.008300724874352183 0.0 0.0001914932213926351 3.7178465948748793 -0.40626385569293 TAS(ph)RPDDIPDSPSSPK ddPTM_A549_MK2206_60min_R1 1 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 T(0.449)AS(0.551)RPDDIPDSPSSPK 97.271 1.1431000000000001e-06 6959500.0 1607.1 1452.7 1329.8 1208.5 2140.0 1645.5 1461.2 1428.2 2019.7 1982.3 2025.7 True False 1878.33919017737 1526.636225016619 1518.3856360527395 1504.5825542516257 1825.208834840859 1819.6257178055018 1726.6811259208407 1630.6517236790617 1562.241174798154 1534.497053232858 1522.6627835241552 1.2335884284437642 1.0026095347804242 0.9971910080697471 0.9881259137163099 1.1986953740449808 1.1950286941367512 1.1339878695429144 1.070921113540957 1.025992880171666 1.0077720883683206 1.0 10.572380755440118 -8.714886883829998 2.6583804374224873 1.010989600686983 1.1011677437780851 0.21332274132289242 0.08007846279579985 0.3420159570144054 4.802105618421804 0.015056198511512178 0.01658905991419194 1.928027020958527e-09 8.714886883829998 0.09017814309110217 TAS(ph)SSTEPSVSR ddPTM_A549_MK2206_60min_R1 1 TASSSTEPSVSR 12 0 Q9BZF3-6;Q9BZF3-2;Q9BZF3-4;Q9BZF3;Q9BZF3-5;Q9BZF3-3 Q9BZF3-6 OSBPL6 Oxysterol-binding protein-related protein 6 1 T(0.006)AS(0.905)S(0.028)S(0.028)T(0.028)EPS(0.002)VS(0.002)R 49.423 0.031225 1700900.0 694.74 776.88 554.18 601.09 845.78 544.79 397.28 574.17 722.78 729.96 681.71 True False 811.9951272377741 816.4198736772294 632.7710571422069 748.3570769839552 721.3668823979909 602.4393161976658 469.46063352438495 655.5603558218787 559.0714840424868 565.0615290207628 512.4225927611452 1.5846200747363772 1.593255030536458 1.2348617451322244 1.4604295118048898 1.407757762027953 1.1756689199659858 0.9161591236536558 1.279335386618002 1.0910359768291598 1.1027256350583161 1.0 9.001190275418974 -5.455088003050284 0.28560132325566323 1.001159379330626 2.042634948360257 0.6750028756963342 0.12462131307808404 2.7919082733834384 0.17913414491984672 0.053582438202083846 0.9996812417684583 3.5068080671843404e-06 5.455088003050284 1.0414755690296311 TAS(ph)SSTEPSVSR ddPTM_A549_PD325901_60min_R1 2 TASSSTEPSVSR 12 0 Q9BZF3-6;Q9BZF3-2;Q9BZF3-4;Q9BZF3;Q9BZF3-5;Q9BZF3-3 Q9BZF3-6 OSBPL6 Oxysterol-binding protein-related protein 6 1 T(0.016)AS(0.97)S(0.011)S(0.001)T(0.001)EPSVSR;T(0.002)AS(0.714)S(0.11)S(0.153)T(0.02)EPSVSR 74.76 0.0012985999999999998 3364400.0 1294.1100000000001 1412.4 1135.38 1154.21 1387.35 1411.9 1452.15 1548.74 1482.98 1464.19 1654.4 True False 1425.4870945265702 1531.4279048182323 1212.433714394577 1225.5029302988992 1289.9073220976727 1400.4019545139524 1507.4123628969712 1517.8491657369743 1420.6555078018662 1371.7407935197707 1450.9192881056758 0.9824716689704291 1.0554880049996913 0.8356313988888615 0.8446389405291587 0.8890276204004285 0.9651825335800182 1.0389360560952035 1.0461292907055377 0.9791416513985957 0.9454287393964685 1.0 10.502751551903847 -7.502907257416876 7.167958530460701 0.9985099525211154 0.9204138213285945 0.2723341998319917 0.06260366864872516 0.19809715183063253 46.91194582983441 0.009715522874479092 0.015175860014132318 3.141179413864099e-08 7.502907257416876 -0.0780961311925209 TAS(ph)TDLK ddPTM_A549_MK2206_60min_R1 2 TASTDLK 7 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 T(0.002)AS(0.499)T(0.499)DLK;T(0.003)AS(0.499)T(0.499)DLK 135.71 0.0055623 190519000.0 13049.3 14993.099999999999 13560.2 13400.6 18208.6 14449.2 14979.800000000001 16050.2 20659.5 19539.5 19786.9 True False 15251.702815245833 15756.18474929212 15483.24026319924 16683.74760157579 15530.139060786569 15978.204753397295 17701.435758328094 18325.365001676022 15980.156236442284 15125.513379227887 14873.266639341511 1.0254440524116817 1.0593627567743047 1.0410114091711553 1.1217271905450379 1.044164636953899 1.0742902108090426 1.19015117442363 1.2321008858405935 1.0744214182359189 1.0169597403181863 1.0 13.860433923160661 -9.95020800357323 1.2225207699431253 1.0122521903655817 1.096393848185396 0.22740477723267105 0.06138728542748775 0.45641869998730006 1.3730706715652718 0.02038296323096039 0.01230134548910693 1.1214811968021611e-10 9.95020800357323 0.08414165781981442 TAS(ph)TDLK ddPTM_A549_PD325901_60min_R1 2 TASTDLK 7 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 T(0.014)AS(0.493)T(0.493)DLK;T(0.008)AS(0.496)T(0.496)DLK 113.71 0.0074732 588780000.0 18078.1 19858.1 18206.4 18083.6 19703.8 18216.9 18820.2 19629.6 18770.0 19525.2 19741.4 True False 19913.375403606162 21531.611779008 19441.99578797709 19200.58290116458 18319.873062419814 18068.54760619394 19536.413009808595 19238.0722288767 17981.162174433277 18292.375539808512 17313.332951045337 1.1501757321893264 1.2436433724165152 1.1229493386946752 1.109005582891265 1.058136703904473 1.043620408461157 1.1284027786590354 1.111170927242819 1.0385731173354242 1.0565484757632448 1.0 14.079595860989107 -2.000000000058818 0.1391659075541418 0.971795607797335 1.765239957363739 0.529186484326821 0.043961429925646764 28.677559318121574 0.254723905860697 0.09335774690878619 4.556870948444068 0.009999999998645669 2.000000000058818 0.793444349566404 TAS(ph)TDLKQLNQVNFTLPK ddPTM_A549_MK2206_60min_R1 2 TASTDLKQLNQVNFTLPK 18 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 T(0.019)AS(0.865)T(0.115)DLKQLNQVNFTLPK;T(0.115)AS(0.77)T(0.115)DLKQLNQVNFTLPK 149.85 1.1665999999999998e-17 10806900.0 4187.3 5899.1 5165.9 5041.6 7720.5 4260.4 3454.9 2915.5 8413.8 9054.8 8950.6 True False 4894.013870343917 6199.338992906685 5898.502299056133 6276.792226326026 6584.8246772845105 4711.232700175361 4082.6106090500375 3328.7810533442844 6508.087734077694 7009.314391168284 6727.91899600696 0.7274186673841538 0.9214348443532111 0.8767201719516706 0.9329470568910418 0.9787312661155141 0.7002511033458476 0.6068162549925288 0.49477127404772947 0.967325518922012 1.0418250272228802 1.0 12.715944620343942 -8.960262343889612 24.999970790500353 0.9855851858295663 0.7873833660357984 0.33201422615040943 0.14030437420502834 150.5660346508565 94725.38825724079 0.02623842978764934 0.027892685178098463 1.0958160475256745e-09 8.960262343889612 -0.19820181979376794 TAS(ph)TDLKQLNQVNFTLPK ddPTM_A549_PD325901_60min_R1 2 TASTDLKQLNQVNFTLPK 18 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 T(0.017)AS(0.877)T(0.107)DLKQLNQVNFTLPK;T(0.122)AS(0.757)T(0.122)DLKQLNQVNFTLPK 189.78 1.3687999999999998e-40 24252000.0 9315.8 9013.9 10833.7 11332.7 13169.7 19049.4 14584.8 17387.9 13797.7 14097.0 14124.8 True False 10261.533158070511 9773.532987284796 11568.940030330401 12032.695140570899 12244.705704998534 18894.26800220844 15139.832545108795 17041.084693956338 13217.830651794236 13206.913014190935 12387.53914448444 0.8283754374765763 0.7889809972173907 0.9339175356294619 0.9713547622514245 0.9884695872344021 1.5252640400834674 1.2221824180349665 1.3756634384920503 1.0670263478182012 1.0661450075071062 1.0 13.596601995868527 -6.393359324091291 1.6753877700288284 1.1081026896445343 0.8231251033840683 0.416750665883697 0.1629904205588573 0.3868905961609667 2.080783087983011 0.027450477066360765 0.0884567756994938 4.0424129444147803e-07 6.393359324091291 -0.284977586260466 TAS(ph)TNNIAQAR ddPTM_A549_MK2206_60min_R1 1 TASTNNIAQAR 11 0 Q9UBI6 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 1 T(0.006)AS(0.497)T(0.497)NNIAQAR 149.83 1.0758000000000001e-11 19262000.0 2102.7 3371.6 2876.1 2504.7 3231.4 2369.2 2771.9 2717.3 3231.6 3397.0 3494.7 True False 2457.584353920701 3543.2000387320395 3283.9742275915823 3118.3516124402554 2756.0653406096953 2619.9071714523207 3275.518349945238 3102.4855963822424 2499.64775980478 2629.615340681036 2626.869541186684 0.9355563020501168 1.3488298460118446 1.2501474382728777 1.1870980128809692 1.049182419376886 0.9973495563349454 1.2469284441379331 1.181058117937863 0.9515690522931597 1.0010452744041152 1.0 11.359128838024173 -8.761419476956512 24.999999999894488 0.9771298225681333 1.1555995468526696 0.2930096714098879 0.11393521791070597 0.439179574734871 550287.2199349588 0.019213705517147434 0.021109927756585295 1.7321301572399723e-09 8.761419476956512 0.17846972428453634 TAS(ph)VNQR ddPTM_A549_MK2206_60min_R1 2 TASVNQR 7 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 T(0.007)AS(0.993)VNQR;T(0.007)AS(0.993)VNQR 64.711 0.025571 42842000.0 2217.2 1976.6599999999999 1578.85 1157.3899999999999 2170.8 1452.88 1505.0700000000002 1507.94 2198.6000000000004 2944.8 3052.6000000000004 True False 2591.409154664467 2077.2635510025116 1802.7546709895237 1440.9506019572111 1851.4781956413713 1606.6227972563097 1778.5217370583628 1721.6951128725705 1700.6206104427506 2279.5676347475783 2294.555172525959 1.1293732160781809 0.9053011999339977 0.7856662993223924 0.6279869053533988 0.8069007090394664 0.7001892203305186 0.7751052397229912 0.7503393832004676 0.7411548132750384 0.993468216429121 1.0 11.163998781398165 -10.81219876182107 1.0439201701774297 1.0007090047728329 0.7918571356863595 0.2647788115099198 0.12335588031838479 0.5755747405373046 1.1073520214403891 0.08839208309071452 0.021667100081185293 1.5409950304966698e-11 10.81219876182107 -0.20885186908647335 TASAETPRPSQLAQPSPFQLS(ph)ASVPK ddPTM_A549_MK2206_60min_R1 1 TASAETPRPSQLAQPSPFQLSASVPK 26 1 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 TASAETPRPSQLAQPSPFQLS(0.583)AS(0.417)VPK 85.069 2.8861e-07 1599600.0 554.83 781.01 640.4 1297.3 1431.9 1167.7 926.92 945.67 1997.7 1815.3 1723.4 True False 648.4717397088615 820.7600730365729 731.2183496226311 1615.13855823801 1221.26940682646 1291.265238943472 1095.3293657531794 1079.7216184929132 1545.224139671373 1405.2224692193952 1295.4322165797157 0.5005833044827299 0.6335800997782786 0.5644589815384098 1.246795114068109 0.9427505285077245 0.9967833302407395 0.8455319790063113 0.8334836857336035 1.1928251589659968 1.0847518312687596 1.0 10.339217813215445 -6.246364553856475 24.4605123138789 1.0479542176120689 0.5729446372636331 0.7157547319065369 0.1257061794392636 259.3594092543021 420837.1147439626 0.01954454163638554 0.051475076844585486 5.670683991253019e-07 6.246364553856475 -0.47500958034843577 TASAETPRPSQLAQPSPFQLSAS(ph)VPK ddPTM_A549_MK2206_60min_R1 2 TASAETPRPSQLAQPSPFQLSASVPK 26 1 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 TASAETPRPSQLAQPSPFQLS(0.001)AS(0.998)VPK;TASAETPRPSQLAQPSPFQLS(0.004)AS(0.996)VPK 167.56 2.1402e-48 40883000.0 1612.08 2226.6000000000004 2446.55 2546.2 3683.8999999999996 3583.6 3151.7 2940.5 5058.3 5498.9 4548.6 True False 1884.1596924280607 2339.9244294224586 2793.5075784966402 3170.0191143032603 3142.003190032822 3962.8141733988414 3724.323093734408 3357.3248799035728 3912.6031264452645 4256.694670848086 3419.0570850263957 0.5510758216584485 0.6843771166237764 0.8170403444653437 0.9271617979665254 0.9189677480943742 1.1590371482107757 1.0892836829326162 0.981944669659604 1.1443515066128411 1.244990816178556 1.0 11.73938279506047 -5.852240386247814 0.7898330750414047 1.0692898268491835 0.4584625786224759 0.8393876939367881 0.08013878164694187 0.3345601339593853 0.24081915940509388 0.01127891952944247 0.14934642838361603 1.405269478406836e-06 5.852240386247814 -0.6108272482267076 down TASAETPRPSQLAQPSPFQLSAS(ph)VPK ddPTM_A549_PD325901_60min_R1 2 TASAETPRPSQLAQPSPFQLSASVPK 26 1 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 TASAETPRPSQLAQPSPFQLS(0.004)AS(0.996)VPK;TASAETPRPSQLAQPSPFQLS(0.003)AS(0.997)VPK 208.15 3.519099999999999e-81 90889000.0 4400.3 4042.6 5285.3 4056.5 4817.4 4690.1 4627.3 5091.6 5833.200000000001 4864.1 4720.7 True False 4847.015216670349 4383.284089505932 5643.9922410907875 4307.060792020071 4479.042443127781 4651.9053805977 4803.39443365572 4990.04404371707 5588.050889499421 4556.979895887502 4140.08382698287 1.1707529169047437 1.0587428353353647 1.3632555467370588 1.040331783610016 1.0818724041131145 1.1236258914080552 1.1602167092245192 1.2053002432449822 1.349743416565498 1.1006974946225785 1.0 12.015444263871743 -7.97985495993433 10.441343993852675 1.1732561939107353 1.1393065613046238 0.008304233810630945 0.11218093105764856 2.1782009815434327 1091.0398955810524 0.022754679252115596 0.03133092920903536 1.0474783129299222e-08 7.97985495993433 -0.0339496326061115 TASES(ph)ISNLS(ph)EAGS(ph)IKKGER ddPTM_A549_MK2206_60min_R1 1 TASESISNLSEAGSIKKGER 20 2 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 3 T(0.017)AS(0.043)ES(0.879)IS(0.066)NLS(0.995)EAGS(1)IKKGER 55.063 0.030389 7120600.0 915.94 1414.5 1119.3 1394.5 1480.6 1442.6 1198.9 1248.5 2091.6 1839.8 1635.4 True False 1070.5282794170012 1486.4920081820103 1278.0335707879624 1736.1525626014836 1262.8057013389596 1595.2549744796213 1416.7246111870363 1425.478698370893 1617.855939598862 1424.1879022034063 1229.2850452561602 0.870854390971561 1.209232971570278 1.0396559981917326 1.4123270833736545 1.0272684160701022 1.2977095756885253 1.1524785212788602 1.1595998046765872 1.3160950308817359 1.15854976654876 1.0 10.263603769693765 -5.256204794459215 23.9667424445878 1.1667744867500986 0.8708541678144678 0.3376399599676254 0.12258492911141892 316.0441022249737 1446932.7987793796 0.01855435198305209 0.21347069352715325 5.5436423715938635e-06 5.256204794459215 -0.29592031893563087 TASES(ph)ISNLS(ph)EAGS(ph)IKKGER ddPTM_A549_PD325901_60min_R1 2 TASESISNLSEAGSIKKGER 20 2 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 3 T(0.003)AS(0.019)ES(0.961)IS(0.026)NLS(0.991)EAGS(1)IKKGER;T(0.001)AS(0.012)ES(0.778)IS(0.208)NLS(1)EAGS(1)IKKGER 125.82 1.6121e-14 163314000.0 3610.8 3876.9 5037.3 3935.6 4776.700000000001 4617.5 4403.0 5530.1 4080.1 5189.5 4303.5 True False 3977.36575786953 4203.619968981734 5379.161469745642 4178.693073603894 4441.201070720406 4579.896610927246 4570.558574414051 5419.797817220476 3908.6275859299494 4861.834084354391 3774.1967821341714 1.0538310500123087 1.1137786956102325 1.4252466896291298 1.1071741392458596 1.1767274805976249 1.2134758401064294 1.21100166161171 1.4360135758887953 1.0356183875817313 1.288177157950201 1.0 11.881953929966095 -8.961559603899623 24.93690380049098 1.0157138332530173 1.216587097598922 0.004179696553890611 0.14039876737250973 109.08704686890152 70766.90202295138 0.019066490439431455 0.020258525817060863 1.092547672323367e-09 8.961559603899623 0.20087326434590458 TASES(ph)ISNLSEAGS(ph)IK ddPTM_A549_MK2206_60min_R1 2 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 TAS(0.005)ES(0.99)IS(0.005)NLS(0.476)EAGS(0.524)IK;T(0.001)AS(0.007)ES(0.987)IS(0.005)NLS(0.002)EAGS(0.998)IK 115.98 1.9233e-07 8918000.0 5065.6 5235.4 4690.1 4150.9 7596.6 5477.6 5374.2 5610.8 8693.9 6982.1 7255.6 True False 5920.549437970562 5501.859497798587 5355.226704505156 5167.870686340979 6479.150203155167 6057.2359962633955 6350.622575228428 6406.148082354352 6724.745531305481 5404.838760720949 5453.834275627124 1.0855756040166387 1.0088057721860169 0.9819195879195229 0.9475665055382962 1.1879990985626612 1.1106380740853896 1.1644326274468955 1.1746136311811057 1.2330307800803533 0.9910163176161891 1.0 12.413055146748148 -6.760007153395058 24.999986384789324 1.1261017052503863 1.004451982738845 0.3532264171894004 0.07616984725738622 38.96454205986843 680115.3857490813 0.013239448655440182 0.02643482024034832 1.7377722051448849e-07 6.760007153395058 -0.12164972251154138 TASES(ph)ISNLSEAGS(ph)IK ddPTM_A549_PD325901_60min_R1 2 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 T(0.026)AS(0.03)ES(0.892)IS(0.052)NLS(0.023)EAGS(0.977)IK;T(0.002)AS(0.016)ES(0.887)IS(0.095)NLS(0.001)EAGS(0.999)IK 111.77 4.1435e-07 16562300.0 4774.799999999999 4553.4 4352.2 4350.9 5336.299999999999 3856.9 4596.6 5214.9 4900.1 5121.3 5694.8 True False 5259.534180978024 4937.130998158689 4647.566463904667 4619.64521138916 4961.496697235604 3825.4906851511196 4771.526128356035 5110.884728490093 4694.165837556763 4797.940243993474 4994.375702311538 1.0530914161190883 0.9885381662163794 0.9305600421197073 0.9249695030454073 0.9934167938025334 0.7659597341426627 0.9553798938569316 1.023328046010762 0.9398904122059082 0.9606686661103313 1.0 12.28608863686019 -5.3685231256128105 3.121139410917901 0.9560670597537998 1.0577650949976338 0.18323221099838694 0.06467067428312225 0.4164607082054167 6.406751677052321 0.008990860036277014 0.08827889451904083 4.280326268021453e-06 5.3685231256128105 0.10169803524383403 TASES(ph)ISNLSEAGSIK ddPTM_A549_MK2206_60min_R1 1 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TAS(0.001)ES(0.731)IS(0.253)NLS(0.015)EAGSIK 205.18 3.1349999999999996e-39 24587000.0 3230.1 3538.7 3493.6 3066.7 4504.7 3280.8 3221.2 3274.1 6303.7 5157.8 5615.4 True False 3775.2619116370624 3718.8047149902322 3989.0450128694906 3818.041637669392 3842.0645973400046 3627.972078381214 3806.4503441118363 3738.2137015107246 4875.922014940397 3992.6493977523264 4220.941202844224 0.8944123431743501 0.8810368437457423 0.945060549571628 0.9045474585376021 0.9102388336400141 0.8595173218562141 0.901801318991819 0.8856351040833689 1.155174114165538 0.9459144787569971 1.0 12.043349017545497 -8.746898480042299 24.99929208679706 1.0732766643604807 0.8982983629590134 0.5215846590011171 0.054485861435214084 100.20396302109434 172274.52548199502 0.009636539786805867 0.010903576730854438 1.7910244720153707e-09 8.746898480042299 -0.1749783014014673 TASES(ph)ISNLSEAGSIK ddPTM_A549_PD325901_60min_R1 3 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASES(0.837)IS(0.162)NLSEAGSIK;TAS(0.001)ES(0.794)IS(0.205)NLSEAGSIK;TASES(0.814)IS(0.185)NLS(0.001)EAGSIK 277.34 7.932999999999997e-107 71852400.0 12257.3 12554.0 13891.300000000001 13620.300000000001 13886.0 14068.900000000001 14420.6 15154.7 16128.0 15889.0 17351.9 True False 13501.652072652654 13611.969638266832 14834.04715317285 14461.594997054353 12910.695264099384 13954.327542928932 14969.383824255108 14852.427619867849 15450.19624663077 14885.765828366293 15217.726302756822 0.8872318902336096 0.8944811706727112 0.9747873537773862 0.9503124651699453 0.8483984405581338 0.9169784805763648 0.9836807106685362 0.9759951864278965 1.015276260017361 0.9781859347588351 1.0 13.893465199837818 -7.867768811872576 2.777154860099344 1.004638359866112 0.9124521580452701 0.574350696374024 0.03312717835177893 0.13113210956256555 2.0558655594395514 0.005331039026967461 0.007644608163221352 1.3559110128339719e-08 7.867768811872576 -0.0921862018208418 TASESIS(ph)NLSEAGS(ph)IKKGER ddPTM_A549_MK2206_60min_R1 1 TASESISNLSEAGSIKKGER 20 2 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 T(0.001)AS(0.002)ES(0.073)IS(0.537)NLS(0.387)EAGS(0.999)IKKGER 101.86 5.4552e-10 61585000.0 5282.8 6064.6 5732.4 5041.1 6625.9 5426.9 5491.4 5981.5 8700.5 8212.6 7951.1 True False 6174.407487940398 6373.262235999029 6545.340517452797 6276.169726303579 5651.238887276653 6001.17095591533 6489.116298167058 6829.39594257549 6729.850641843512 6357.367956101589 5976.622430803632 1.0330931156228604 1.0663652104156869 1.0951571047416315 1.050119829212579 0.9455572863612824 1.00410742445184 1.0857497480051645 1.1426848561449434 1.1260290774196688 1.063705802015464 1.0 12.545114688992795 -7.775603227942322 24.960020065259833 1.0703752739778891 1.0336545114712914 0.18668642872459307 0.04983399075953968 523.3971339464731 922346.0002404979 0.010162019748952339 0.014078368453115754 1.6764738054484803e-08 7.775603227942322 -0.036720762506597726 TASESIS(ph)NLSEAGSIK ddPTM_A549_MK2206_60min_R1 1 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TAS(0.023)ES(0.276)IS(0.68)NLS(0.02)EAGSIK 239.86 2.5723e-65 23014000.0 4293.3 4130.9 4387.4 4166.3 5118.0 3511.0 4050.9 4043.4 6799.8 5528.2 5821.5 True False 5017.904078892731 4341.145165499519 5009.599292839369 5187.043687032316 4365.148979773605 3882.531689586822 4786.896094301078 4616.564332393168 5259.656157049307 4279.3757804983525 4375.860884773596 1.1467238586933173 0.9920665395477093 1.144825995330645 1.185376734685817 0.997552046264253 0.8872612251218085 1.0939324216082222 1.0550071069345766 1.2019706054529742 0.9779506006210169 1.0 12.09535115806735 -11.301340891868083 1.8726489466018803 0.9996465575519118 1.095605985703833 0.09860842121087587 0.09070714173991623 0.6629159046946427 4.197644383640476 0.07582189336084044 0.014919046241600552 4.996421956025796e-12 11.301340891868083 0.09595942815192116 TASESIS(ph)NLSEAGSIK ddPTM_A549_PD325901_60min_R1 1 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASES(0.27)IS(0.73)NLSEAGSIK 259.53 4.564399999999999e-78 10923000.0 4031.1 3518.3 3269.7 4207.7 5099.1 4183.3 3967.2 4419.2 4846.0 5036.5 4847.6 True False 4440.3343044610265 3814.7994884749232 3491.601504303363 4467.600072619955 4740.956806940025 4149.232591768696 4118.173966935141 4331.055589204666 4642.339472418943 4718.494530465532 4251.375931468249 1.0444464041850843 0.8973093770038467 0.8212874044985968 1.0508598027173361 1.1151582178014294 0.9759740513786375 0.9686685048134274 1.0187420870374309 1.091961648946832 1.1098746868136782 1.0 12.053714120794004 -6.292197774328663 24.92130473669413 1.0378939438979282 0.9186438729886096 0.38452562889879593 0.0677100307903065 480.01626791436644 388921.71236621414 0.009416067557606956 0.021883181774633508 5.102725728964165e-07 6.292197774328663 -0.1192500709093186 TASESISNLS(ph)EAGS(ph)IK ddPTM_A549_MK2206_60min_R1 2 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 TASES(0.001)IS(0.001)NLS(0.998)EAGS(1)IK;TASES(0.003)IS(0.004)NLS(0.993)EAGS(1)IK 127.75 6.7051e-10 13967400.0 2848.0 2418.8 2699.9 2059.8900000000003 3335.0 2833.9 2813.3 2793.2 4065.3 3730.6000000000004 3682.7999999999997 True False 3328.672773085157 2541.906588469881 3082.7864180920383 2564.563142471976 2844.4259178477846 3133.7814170094243 3324.440194054957 3189.1446538162404 3144.5160409501104 2887.8548689857753 2768.259119890781 1.2024426287147882 0.9182328959762154 1.1136191680689438 0.926417301055675 1.0275143310861767 1.1320404923412895 1.2009136609242415 1.1520397895201606 1.1359182449199965 1.043202512451115 1.0 11.434763275861023 -7.227393486960002 22.260426024367142 1.088634660161115 1.029052631797267 0.11046271096699167 0.09080436288207096 361.1371202321309 236123.11094699986 0.014137240308770352 0.02448452113685459 5.923883554678653e-08 7.227393486960002 -0.05958202836384796 TASESISNLS(ph)EAGS(ph)IKK ddPTM_A549_MK2206_60min_R1 2 TASESISNLSEAGSIKK 17 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 TASESIS(0.002)NLS(0.998)EAGS(1)IKK;TASES(0.002)IS(0.003)NLS(0.995)EAGS(1)IKK 98.54299999999999 2.5976e-07 17601000.0 5182.1 6059.5 6103.4 5231.299999999999 7552.6 6265.9 6263.6 6221.5 9302.5 7952.7 8377.599999999999 True False 6056.711789819028 6367.902667782891 6968.953896137988 6512.968734841977 6441.6225448687255 6928.953379032199 7401.615042648355 7103.416677544661 7195.498603039973 6156.179546609977 6297.210710002446 0.9618086592209133 1.011225915891326 1.1066731314974978 1.0342624750505525 1.022932666781643 1.100321030710676 1.1753799235098932 1.1280258839459896 1.1426485366943007 0.9776041854263418 1.0 12.620497226618623 -5.5663546170338964 3.9585879837225892 1.078785634482989 0.9696624694614698 0.26790546533222337 0.059403302879595915 0.21968151883417564 7.085015087821514 0.00907740829882412 0.044748306891011044 2.7142221039873804e-06 5.5663546170338964 -0.10912316502151909 TASESISNLS(ph)EAGS(ph)IKK ddPTM_A549_PD325901_60min_R1 1 TASESISNLSEAGSIKK 17 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 T(0.028)AS(0.008)ES(0.246)IS(0.018)NLS(0.7)EAGS(1)IKK 88.87200000000001 1.7236000000000001e-06 17640000.0 4245.3 4363.7 4885.5 4493.3 4442.0 4646.3 4554.7 5269.8 5997.0 4584.2 5052.4 True False 4676.279730775322 4731.444313406482 5217.059408898089 4770.840935975294 4130.00924406809 4608.462073275854 4728.031600927475 5164.689704921872 5744.966945129263 4294.752829655535 4430.986829802414 1.0553585263045897 1.0678082547172605 1.1774035015876423 1.0766994169080017 0.932074366885955 1.0400532094295016 1.0670380622950997 1.1655845307832196 1.2965434486261929 0.9692542529734952 1.0 12.113412323377847 -8.219767992338374 7.469912470390216 1.1458508621022827 1.0591793137604733 0.001699522886592253 0.09839847296210423 0.4814434346869243 75.6583765014625 0.01908556765718572 0.024574617142813077 6.028815698766189e-09 8.219767992338374 -0.08667154834180946 TASESISNLS(ph)EAGS(ph)IKKGER ddPTM_A549_MK2206_60min_R1 1 TASESISNLSEAGSIKKGER 20 2 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 TASESIS(0.002)NLS(0.998)EAGS(1)IKKGER 160.67 1.9655000000000002e-27 56872000.0 3487.1 4504.1 4349.3 4101.3 5588.1 4590.0 4296.4 4159.5 7038.1 6523.2 6229.1 True False 4075.6372285903267 4733.339451433439 4966.09613993396 5106.118684114351 4766.097892511308 5075.710753404591 5077.000266497603 4749.121862934503 5443.981587536216 5049.604589440843 4682.242555585878 0.8704455568471402 1.0109129109056092 1.0606234258431244 1.0905284430476143 1.017909225318836 1.084034133889392 1.084309538906903 1.014283605890694 1.1626867943954737 1.0784585654189796 1.0 12.192983957402673 -5.212856322968943 1.732101609368193 1.0717354011507527 0.78404704812353 0.633849322073931 0.043039287552775495 0.6691294413766836 1.7718226455193784 0.008291902079574304 0.32863686506176876 6.125530082552263e-06 5.212856322968943 -0.28768835302722273 TASESISNLS(ph)EAGS(ph)IKKGER ddPTM_A549_PD325901_60min_R1 4 TASESISNLSEAGSIKKGER 20 2 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 TASES(0.013)IS(0.112)NLS(0.874)EAGS(1)IKKGER;TASESIS(0.004)NLS(0.995)EAGS(1)IKKGER;TAS(0.001)ES(0.059)IS(0.084)NLS(0.856)EAGS(1)IKKGER;TASESIS(0.004)NLS(0.995)EAGS(1)IKKGER 126.46 7.3222e-16 324584000.0 11926.9 13470.300000000001 14264.5 14635.8 15690.5 15994.600000000002 13859.3 16503.2 15432.499999999998 15432.800000000001 15977.1 True False 13137.710107880277 14605.489455021961 15232.57474940676 15539.820125686516 14588.453409286441 15864.345280592735 14386.723245599967 16174.030729490063 14783.925692964378 14458.37037422188 14012.017987181582 0.937603000502773 1.0423544608908792 1.087107850085674 1.1090351254118138 1.0411386441718953 1.1321956120171763 1.0267417054960373 1.1542970287567662 1.0550889747992722 1.031854968174365 1.0 13.774377124786149 -10.0812247965704 1.0318840897635506 1.006390750547763 1.0678664186206115 0.09345871727374455 0.0561445999522809 0.602781711782694 1.2882708976337185 0.01990203929381964 0.010114706519322607 8.294213369256716e-11 10.0812247965704 0.061475668072848544 TASESISNLS(ph)EAGSIK ddPTM_A549_MK2206_60min_R1 1 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLS(0.995)EAGS(0.005)IK 228.9 4.5646000000000004e-55 39717000.0 10069.0 11055.0 10810.0 9167.0 13044.0 11416.0 11287.0 11681.0 14134.0 14261.0 15265.0 True False 11768.40103658512 11617.652280277222 12343.020548751785 11412.915411522261 11125.244879282309 12624.033542672498 13337.701798705533 13336.817521562196 10932.671567360065 11039.430195305356 11474.27920743261 1.0256331420767582 1.012495170306797 1.075712062223171 0.9946520565866482 0.9695811543504876 1.1002027503823613 1.1623999693214602 1.1623229032916598 0.9527981121705917 0.9621022807388568 1.0 13.486115908654888 -8.81700097109063 24.999932895331984 0.9777101722068106 1.0608024377752034 0.3103922975996466 0.060326367029588636 89.36993779418918 40211.48788141143 0.01151080869263657 0.01225401511581709 1.5240493459904774e-09 8.81700097109063 0.08309226556839289 TASESISNLSEAGS(ph)IK ddPTM_A549_MK2206_60min_R1 1 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLSEAGS(1)IK 258.13 7.742899999999998e-78 42034000.0 7875.5 8777.3 8224.8 6687.5 12647.0 8707.2 8726.1 7930.7 12456.0 11490.0 10909.0 True False 9204.691862511283 9224.027079120511 9391.200315390717 8325.93780021328 10786.643053379594 9628.590124628421 10311.519417532065 9054.90101175013 9634.735888144685 8894.401019848427 8199.994226916626 1.12252418816305 1.1248821430681597 1.1452691374542603 1.0153589831665053 1.3154452009212698 1.174219134572364 1.2575032533174622 1.1042569983802253 1.1749686184556685 1.0846838148559177 1.0 13.001407178685286 -10.689163910223227 0.7986163327230664 0.9926189589615212 1.1611842338087375 0.22568850466506107 0.07824613265500321 0.585784704097937 0.617517353043689 0.0621530825001124 0.013756809292975018 2.0456724189783527e-11 10.689163910223227 0.16856527484721628 TASESISNLSEAGS(ph)IK ddPTM_A549_PD325901_60min_R1 4 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK 305.9 2.7437999999999994e-143 156981000.0 43972.5 42467.8 39416.4 38798.5 52369.0 46221.8 39961.1 41654.6 38960.1 42713.9 43023.0 True False 48436.55582915644 46046.71054675704 42091.43393406828 41194.99522721331 48690.782103242156 45845.384985588964 41481.84152805299 40823.76632559846 37322.74248439733 40016.937064400234 37731.443745267454 1.2837185917443643 1.2203802976007923 1.1155532297739783 1.091794830468958 1.2904563745814603 1.2150445473303475 1.099397144941106 1.081956115997254 0.9891681520688859 1.0605726442529633 1.0 15.203479683627705 -8.25206956551152 1.5620201236798412 0.9948000142309245 1.1975017960885848 0.6127719765086833 0.06257011659293621 0.1558152473475247 0.7405492503072909 0.010831007430555463 0.014084441298243613 5.596679464178199e-09 8.25206956551152 0.2027017818576603 TASESISNLSEAGS(ph)IKK ddPTM_A549_MK2206_60min_R1 2 TASESISNLSEAGSIKK 17 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLS(0.1)EAGS(0.9)IKK;TASESISNLS(0.004)EAGS(0.996)IKK 219.35 4.4359999999999995e-56 30699000.0 11562.400000000001 13417.0 12103.3 10875.0 16354.7 12784.099999999999 13421.9 12933.5 18199.300000000003 16671.4 16774.4 True False 13513.850446460607 14099.867991359524 13819.729935958125 13539.375488197305 13948.945294940082 14136.904976601216 15860.485494112332 14766.863232182572 14077.187608310169 12905.319161209847 12608.853530111859 1.0717747187868807 1.1182513903969855 1.096033822817793 1.0737990933008477 1.1062818091770104 1.1211887696879133 1.2578848232501934 1.1711503505784295 1.1164526239195105 1.0235124970236178 1.0 13.6221494830018 -10.329205698937242 0.9155557220019306 1.006341491507708 1.1262687198110721 0.43468168542758645 0.04974124701677023 0.3893470670017222 0.6299002023352257 0.026995696302141554 0.010215432325972065 4.685913862771845e-11 10.329205698937242 0.11992722830336411 TASESISNLSEAGS(ph)IKK ddPTM_A549_PD325901_60min_R1 1 TASESISNLSEAGSIKK 17 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLSEAGS(1)IKK 206.34 2.4918e-49 22484000.0 8210.9 8828.5 8276.6 6222.4 8363.7 8277.7 8382.9 8132.9 8189.3 8167.5 8469.5 True False 9044.464523454892 9572.50867862344 8838.299847238955 6606.743515904278 7776.262565198627 8210.289155662687 8701.91584679889 7970.682929363375 7845.132200057878 7651.802656125726 7427.805192584034 1.217649667560606 1.2887398673541806 1.189893867445954 0.8894610648244371 1.046912562133764 1.1053452457072905 1.1715325888577335 1.0730872340757338 1.0561844308855202 1.0301566152765198 1.0 12.858720263185502 -6.038767120987329 10.204434373517069 1.0404207768043203 1.2498265990085577 0.6083787549412577 0.06731316401630137 0.29569583905705626 77.31563615000128 0.009789974611681204 0.026190716012467745 9.146035421378428e-07 6.038767120987329 0.20940582220423742 TASESISNLSEAGS(ph)IKKGER ddPTM_A549_MK2206_60min_R1 2 TASESISNLSEAGSIKKGER 20 2 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLS(0.018)EAGS(0.982)IKKGER;TASESISNLSEAGS(1)IKKGER 258.46 1.5503999999999996e-98 61687000.0 3312.8999999999996 4223.7 4639.200000000001 3686.6 4892.299999999999 3042.7 3327.8999999999996 2566.0 5509.5 5991.2 6396.200000000001 True False 3872.036527371424 4438.668289118672 5297.10831912759 4589.817165497765 4172.649150790622 3364.6764944192046 3932.536352964662 2929.7383580454216 4261.60704686361 4637.783758930892 4807.847013860496 0.8053576821826417 0.923213296164058 1.1017630768734128 0.9546512508126455 0.8678830958558648 0.6998301910853675 0.817941240981169 0.6093659697572129 0.8863857428445339 0.9646279812066959 1.0 12.231175274751058 -5.254360892472231 22.437900788703818 0.9051612906281692 0.805357476287921 0.001623773199263434 0.13244666825572218 615.7487007139418 1951613.1456277128 0.019632583913802546 0.25447625557136644 5.567229279085886e-06 5.254360892472231 -0.09980381434024821 TASESISNLSEAGS(ph)IKKGER ddPTM_A549_PD325901_60min_R1 4 TASESISNLSEAGSIKKGER 20 2 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLS(0.017)EAGS(0.983)IKKGER;TASESISNLSEAGS(1)IKKGER;TASESISNLS(0.001)EAGS(0.999)IKKGER;TASESISNLS(0.001)EAGS(0.999)IKKGER 247.54 3.279999999999999e-87 100194000.0 7890.1 8486.5 9436.2 9502.3 9548.7 13400.0 10588.3 11627.2 11096.7 10749.5 10110.0 True False 8691.097143615378 9201.687138374342 10076.597276480219 10089.235489710914 8878.032253226698 13290.874842755842 10991.243550640083 11395.286374638054 10630.34428881372 10070.774735478852 8866.534092570346 0.9802135820915667 1.037799780873209 1.1364753319928964 1.1379007156996241 1.001296804426206 1.4989932598232316 1.2396324692249392 1.285201890126003 1.1989289363609787 1.1358186446175842 1.0 13.114154553266651 -5.582586200962362 1.8516691577724025 1.1451905495157553 0.9678585324780674 0.16168714311735788 0.13441211248431406 0.8506184983607469 4.5651296394967265 0.021651296720752663 0.20886923195905902 2.6146514274090206e-06 5.582586200962362 -0.17733201703768786 TASFS(ph)ESR ddPTM_A549_MK2206_60min_R1 1 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 TAS(0.102)FS(0.892)ES(0.006)R 95.60799999999999 0.0025057 10137000.0 2216.5 2548.2 2221.1 1828.2 3056.4 2694.6 3036.6 3299.7 4489.5 5250.4 4388.6 True False 2590.591011777824 2677.892495757796 2536.085378430395 2276.109082071017 2606.807608788598 2979.740783469282 3588.3109136129374 3767.4425799074384 3472.635418258314 4064.330993438833 3298.7895008017517 0.7853156471936739 0.8117803500668805 0.7687927277002713 0.6899831230570552 0.7902315707489151 0.9032830930088366 1.087765955584865 1.1420681977409541 1.0526999123206588 1.2320673969803229 1.0 11.687721005626925 -7.474494970901999 2.866583764578123 1.0401261965651656 0.7669589058283397 0.8087217490242555 0.07456175820535146 0.0734873552988382 1.201103248307733 0.008418217854113178 0.013659955295004236 3.3535518781636454e-08 7.474494970901999 -0.2731672907368259 TASFS(ph)ESR ddPTM_A549_PD325901_60min_R1 2 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 TAS(0.011)FS(0.927)ES(0.063)R;TAS(0.143)FS(0.852)ES(0.004)R 151.48 0.00058713 71057000.0 10511.1 13078.5 9368.0 14710.0 13230.599999999999 12159.7 10766.7 11752.900000000001 16624.6 12495.2 13049.7 True False 11578.17913413715 14180.671093999736 10003.768814360308 15618.603291166095 12301.328299092129 12060.675434735693 11176.432660264312 11518.479189528314 15925.925875603794 11706.250939555834 11444.669628864027 1.0116656495646152 1.2390633853016932 0.8740985226109371 1.3647054740466427 1.0748521973991776 1.0538246909563966 0.9765622794455152 1.006449252189695 1.3915583753888199 1.022856169655792 1.0 13.482388197036428 TASFS(ph)ESRADEVAPAKK ddPTM_A549_PD325901_60min_R1 1 TASFSESRADEVAPAKK 17 2 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 TAS(0.013)FS(0.987)ESRADEVAPAKK 267.92 1.1882999999999998e-100 397790000.0 22884.0 24972.0 25005.0 29762.0 31370.0 44882.0 35389.0 38093.0 34569.0 32992.0 34774.0 True False 25207.1668336896 27076.478079241624 26701.98966728004 31600.33114559382 29166.679420624943 44516.4958725797 36735.74776060386 37333.20523161962 33116.185146935735 30908.879489550076 30497.018450548116 0.8265452858797926 0.8878401711022011 0.8755606621210583 1.0361777233021898 0.9563780625938775 1.4596999357417384 1.2045684997099648 1.2241591843529425 1.0858827134408133 1.0135049608101792 1.0 14.896380583639118 -6.403579259845687 1.8331397029960474 1.0957960102734055 0.8558853681777494 0.42822151005007403 0.1334812081691336 0.3348216322877918 2.1702999728848114 0.02157606862840937 0.0656155990387096 3.9483963353740016e-07 6.403579259845687 -0.23991064209565605 TASGSSVTS(ph)LDGTR ddPTM_A549_MK2206_60min_R1 1 TASGSSVTSLDGTR 14 0 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 1 TASGSS(0.001)VT(0.063)S(0.936)LDGTR 81.185 0.0004644 4197000.0 3727.0 3365.1 1767.8 1812.3 2896.2 1882.4 1718.4 2083.2 2835.1 3475.7 4409.8 True False 4356.026483598445 3536.369216495782 2018.5006222093787 2256.3135813572394 2470.172816572941 2081.5943185640076 2030.6110366701164 2378.499979532434 2192.9543767243877 2690.536956021515 3314.7249557115174 1.314144172382293 1.06686656170442 0.6089496562094396 0.6806940580301974 0.7452120008680206 0.627984024731001 0.612603176372514 0.7175557584149181 0.6615795898678605 0.8116923702479507 1.0 11.694673450175422 -5.549213468307803 4.369088790705948 0.7715607665311852 1.2710902339338312 0.7037324070141172 0.11833244315438732 0.10855103383263184 4.756662984147556 0.022572311861731267 0.10899735445472637 2.8234918058370667e-06 5.549213468307803 0.49952946740264603 TASGSSVTSLDGTRS(ph)R ddPTM_A549_MK2206_60min_R1 1 TASGSSVTSLDGTRSR 16 1 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 1 TASGSSVTS(0.001)LDGT(0.238)RS(0.761)R 67.64399999999999 0.00060987 13027000.0 1372.1 1455.3 1281.9 1430.3 1829.0 1231.2 1272.5 1301.1 1641.9 2202.2 2001.8 True False 1603.676935375752 1529.3685539111214 1463.692695785837 1780.7235642086075 1559.9565228616484 1361.4847667955837 1503.6967784932037 1485.5349094516373 1270.0122715755263 1704.7214905056746 1504.6978131305993 1.065780066523272 1.0163958108832452 0.9727486030836656 1.183442647865436 1.0367241244380363 0.9048227191630899 0.9993347271268289 0.9872646165151974 0.844031446376068 1.1329327893146306 1.0 10.55525806581848 -7.18263206497699 5.759464071858254 0.9345147586152698 1.0567558400825503 0.05542552591646255 0.08775725885973394 0.1933321993066589 10.97480592655256 0.011238591063102018 0.019593736488633273 6.567013892283024e-08 7.18263206497699 0.12224108146728052 TASGSSVTSLDGTRS(ph)R ddPTM_A549_PD325901_60min_R1 1 TASGSSVTSLDGTRSR 16 1 Q92597;E5RJY1;E7ESM1;Q92597-3;Q92597-2 Q92597 NDRG1 Protein NDRG1 1 TASGSSVTSLDGT(0.188)RS(0.812)R 128.79 1.4919e-10 23155000.0 2918.6 2746.5 3036.6 3047.5 3351.3 3153.5 2597.2 3031.8 3580.3 3308.1 3347.4 True False 3214.8941234402387 2977.9571938425875 3242.6819365591896 3235.7371536253345 3115.9162493573576 3127.818941539594 2696.037867242373 2971.3283705989106 3429.832441828632 3099.226001436122 2935.691020916913 1.0951064333862086 1.014397350615077 1.1045719435236727 1.1022063052857336 1.061391075272 1.0654455524282909 0.918365675417814 1.012139339401892 1.168322012565676 1.0557057876166176 1.0 11.519484418358145 -11.329264158945731 1.9458531464713185 0.9995914135096753 1.0766139832250452 0.0 0.06493404269084198 0.5932564376147426 4.058131436670843 0.056374312822609 0.010882249643896499 4.685283138369116e-12 11.329264158945731 0.07702256971536992 TASIGT(ph)LGR ddPTM_A549_MK2206_60min_R1 2 TASIGTLGR 9 0 Q59FP8;Q92859-4;Q92859;Q92859-3;Q92859-2 Q59FP8 NEO1 Neogenin 1 TASIGT(1)LGR;TASIGT(1)LGR 99.86399999999999 0.0008414 69670000.0 17762.0 25058.0 21313.0 18138.2 29845.0 24218.0 17235.6 21530.3 32397.0 30817.0 30938.0 True False 20759.791360793024 26333.345168628377 24335.503881179167 22582.059814254735 25454.840035432422 26780.73268539265 20367.08541877993 24582.285958778397 25059.131227378217 23855.41829666397 23255.24075463805 0.8926930312107249 1.1323617521945641 1.0464524593806095 0.9710525060786974 1.0945851003652018 1.1515998895883919 0.8758062594866018 1.0570643502744936 1.0775692022186611 1.0258082704177647 1.0 14.50526825528488 -5.234524224791273 23.587648281328406 1.0403058282711235 0.8926925942553754 0.2573451691258043 0.07336395126502392 4287.066447891014 3756933.524178292 0.009528989087454505 0.9829637190127875 5.827412687897006e-06 5.234524224791273 -0.1476132340157481 TASIGT(ph)LGR ddPTM_A549_PD325901_60min_R1 2 TASIGTLGR 9 0 Q59FP8;Q92859-4;Q92859;Q92859-3;Q92859-2 Q59FP8 NEO1 Neogenin 1 TASIGT(1)LGR;TASIGT(1)LGR 147.75 2.9278000000000003e-05 165747000.0 7747.299999999999 10350.400000000001 10024.6 10741.5 10524.6 10762.2 10613.0 11822.7 12983.5 12550.5 11556.900000000001 True False 8533.800192739178 11222.66453273196 10704.929638816853 11404.978059283521 9785.388403898918 10674.556211396035 11016.88352265644 11586.886973771267 12437.848646337465 11758.059288118267 10135.474565225146 0.8419734209603447 1.1072658177483832 1.056184352289286 1.1252534832867171 0.9654593221981559 1.0531876078127096 1.086962771378798 1.1432012284383726 1.2271599683168042 1.1600896645195298 1.0 13.30712602009261 -7.789283564666072 3.1049656275539954 1.1128597517503673 1.0306499827079105 0.2392031609756643 0.08769841282229132 0.43106223391894893 8.587539351417758 0.016548248217340165 0.024127717459098193 1.6244877297457872e-08 7.789283564666072 -0.0822097690424568 TASKYT(ph)DR ddPTM_A549_MK2206_60min_R1 1 TASKYTDR 8 1 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 T(0.002)AS(0.017)KY(0.004)T(0.978)DR 45.879 0.017937 5812900.0 3425.5 3286.7 3231.0 2872.2 4137.0 3035.9 3089.5 3270.0 4948.0 5731.3 5354.1 True False 4003.6406545657296 3453.9789913692575 3689.2043841828854 3575.8891289379553 3528.452780250763 3357.156922932678 3650.822158864245 3733.5325139550014 3827.2859003323624 4436.59534943928 4024.529204357346 0.9948096910890843 0.8582318119668866 0.916679739878293 0.8885235880674814 0.8767367811446163 0.8341738256732971 0.907142667746456 0.9276942281628163 0.9509897197884839 1.1023886581903273 1.0 11.974604309065699 -8.997095697995515 0.9534145264358447 0.9871295004819242 0.8927641941793176 0.48823839122701973 0.052296901240095305 0.2746217126622837 0.5156917503180808 0.009277461406648651 0.008627774485648707 1.0067098131055765e-09 8.997095697995515 -0.09436530630260653 TASLT(ph)SAASVDGNR ddPTM_A549_MK2206_60min_R1 2 TASLTSAASVDGNR 14 0 G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36 G3V578 NDRG2 Protein NDRG2 1 T(0.011)AS(0.128)LT(0.843)S(0.017)AASVDGNR;T(0.05)AS(0.348)LT(0.571)S(0.032)AASVDGNR 192.14 1.1028e-26 41272000.0 5485.3 6160.299999999999 5388.4 4550.5 6932.5 5847.1 4777.2 5528.799999999999 8548.4 7531.5 8266.900000000001 True False 6411.084537290734 6473.832957231274 6152.556144763562 5665.372704279705 5912.738433427223 6465.836241009143 5645.1554029215995 6312.524331239878 6612.201048989721 5830.12891914608 6214.000575167022 1.03171611584835 1.0418140260724498 0.9901119368013884 0.9117110041669781 0.9515188101295433 1.0405271391265283 0.9084574960422926 1.0158551250327503 1.0640811774968328 0.9382247150804899 1.0 12.601306659657498 -8.5083865527218 24.8241899785658 1.030771484240224 0.9816987546203657 0.0 0.05346355033251059 820.1989723312494 1404949.6264894889 0.008089170559876378 0.009606339547476745 3.1017975405061506e-09 8.5083865527218 -0.04907272961985831 TASLT(ph)SAASVDGNR ddPTM_A549_PD325901_60min_R1 1 TASLTSAASVDGNR 14 0 G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36 G3V578 NDRG2 Protein NDRG2 1 T(0.005)AS(0.314)LT(0.675)S(0.005)AASVDGNR 233.86 4.9469000000000005e-48 22935000.0 8381.8 8883.4 7629.7 9264.6 8908.5 8753.1 7909.3 8567.0 9490.2 10283.0 11790.0 True False 9232.714165644964 9632.03529429501 8147.497323113236 9836.85330056678 8282.797692656588 8681.817655681056 8210.292739635035 8396.124464318515 9091.359897059485 9633.729625092243 10339.9047429678 0.8929206211424879 0.931540041589434 0.7879663812816432 0.9513485418960802 0.801051643951531 0.8396419378607513 0.794039494920771 0.812011780865655 0.8792498696124398 0.9317039048782506 1.0 13.3359352743434 -10.13723694806971 0.8254055812199232 0.9924770269168728 0.8527994068865055 0.357508134198671 0.05564889700063586 0.3436041017784574 0.4623637644937879 0.025282784125939147 0.010486092781136299 7.290596318249756e-11 10.13723694806971 -0.13967762003036732 TASNIIDVSAADS(ph)QGMEQHEYMDR ddPTM_A549_MK2206_60min_R1 2 TASNIIDVSAADSQGMEQHEYMDR 24 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 TASNIIDVSAADS(0.998)QGMEQHEY(0.002)MDR;TASNIIDVSAADS(0.998)QGMEQHEY(0.002)MDR 104.29 2.3550999999999998e-11 7637000.0 1414.88 1579.0 1443.8899999999999 1139.51 2409.5 1838.05 1318.25 1782.27 2423.5 2340.1 2718.3 True False 1653.67715350517 1659.3643555457024 1648.6553136112118 1418.6900011545474 2055.065741845349 2032.5512310011554 1557.7589612956122 2034.9122304729606 1874.5811195342505 1811.469784729966 2043.2710887365915 0.8093283180195547 0.8121116990754914 0.8068705727298373 0.6943229456800863 1.00577243674311 0.9947535802789318 0.7623848689890755 0.9959090801461888 0.9174412195561156 0.8865538179028636 1.0 10.996664909404055 -4.5488953565872405 0.14637986210118337 1.0295185908247217 0.49332449647169113 0.23999588048421205 0.09163127985567225 23.395441359956582 0.4371855816368966 0.20819542231672666 2.430354601124048 2.8255607127778407e-05 4.5488953565872405 -0.5361940943530306 TASNIIDVSAADS(ph)QGMEQHEYMDR ddPTM_A549_PD325901_60min_R1 2 TASNIIDVSAADSQGMEQHEYMDR 24 0 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 TASNIIDVS(0.001)AADS(0.997)QGMEQHEY(0.002)MDR;TASNIIDVSAADS(0.998)QGMEQHEY(0.001)MDR 89.954 7.0005e-08 11715400.0 2809.8 3254.6000000000004 3207.0 3991.4 3948.8 3501.2 3079.7 3809.0 3220.7 3336.2 4115.299999999999 True False 3095.0488275345656 3528.876564019692 3424.6463052576337 4237.939712872898 3671.449910620458 3472.6873880191592 3196.8996687765048 3733.026506897304 3085.345179285946 3125.551762640546 3609.1441890360784 0.8575575442335497 0.9777599284450246 0.9488804342206899 1.1742228880040275 1.017263295208225 0.9621913689590319 0.8857777637391442 1.0343245687544314 0.8548689156445071 0.8660091143311486 1.0 11.817441066204776 -7.486775062462159 6.245016576766513 0.9354484831300013 1.000713203431906 0.11633998933904699 0.08624688230947032 0.3765319214564383 43.48487258793017 0.013689084283201473 0.021641052536508103 3.260055078650424e-08 7.486775062462159 0.06526472030190467 TASPEDS(ph)DMPDHDLEPPR ddPTM_A549_MK2206_60min_R1 2 TASPEDSDMPDHDLEPPR 18 0 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 T(0.278)AS(0.278)PEDS(0.443)DMPDHDLEPPR;T(0.078)AS(0.068)PEDS(0.855)DMPDHDLEPPR 67.902 0.00042027 5628600.0 771.75 673.67 1356.79 768.75 1224.58 1178.79 958.33 947.99 1562.1799999999998 1510.44 1397.14 True False 902.0025325240412 707.9569255227822 1549.2032238983277 957.0937845104993 1044.4459041913174 1303.5287753825262 1132.4461561755536 1082.3704855976157 1208.3487242888452 1169.2305549538614 1050.191578897635 0.8588933206556989 0.6741216933637102 1.4751624894235917 0.9113516083562023 0.9945289270817151 1.2412295066685015 1.078323402063707 1.0306409871747002 1.1505983751623914 1.1133497720303367 1.0 10.036436817043114 -5.70424221385149 24.999999938585614 1.086011673931255 0.7665062258797413 0.4326358718220785 0.14982414586127243 56.122026268238045 24529.046238009683 0.018761068055428775 0.07266126000399645 1.975867355961118e-06 5.70424221385149 -0.3195054480515138 TASPEDS(ph)DMPDHDLEPPR ddPTM_A549_PD325901_60min_R1 3 TASPEDSDMPDHDLEPPR 18 0 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 T(0.329)AS(0.275)PEDS(0.396)DMPDHDLEPPR;T(0.065)AS(0.058)PEDS(0.877)DMPDHDLEPPR;T(0.008)AS(0.038)PEDS(0.954)DMPDHDLEPPR 98.132 3.059e-07 12546600.0 2591.77 1975.69 1942.99 1905.4099999999999 2065.8199999999997 2067.25 1744.12 2097.19 2359.32 2169.34 2086.63 True False 2854.8845824397677 2142.1883299846577 2074.852985548029 2023.1028481999174 1920.7239298921072 2050.415001394552 1810.4934410190854 2055.3599002362726 2260.165985156309 2032.3675021781194 1829.987738237394 1.560056672942264 1.1706025593635774 1.1338070426343316 1.1055280895753585 1.0495829506169851 1.1204528634544124 0.9893473071917491 1.1231550120745357 1.2350716553616112 1.1105907759445717 1.0 10.837618266481039 -5.1790294861247155 2.2467618187199228 1.1027439374869803 1.7438691276798246 0.8092495267253668 0.06442397540685549 0.3636496361101824 1.731512292022845 0.012288916575823315 0.49753824013367975 6.62171544494619e-06 5.1790294861247155 0.6411251901928443 TASPLPLRPDAPVEKS(ph)PEETATQVPSLESLTLK ddPTM_A549_PD325901_60min_R1 2 TASPLPLRPDAPVEKSPEETATQVPSLESLTLK 33 2 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.029)AS(0.027)PLPLRPDAPVEKS(0.907)PEET(0.016)AT(0.021)QVPS(0.001)LESLTLK;TASPLPLRPDAPVEKS(0.747)PEET(0.207)AT(0.046)QVPSLESLTLK 122.41 6.2941e-22 41881000.0 3452.8 3642.5 4359.9 3439.4 4558.6 4567.2 5115.7 4854.7 4427.700000000001 4512.3 5470.4 True False 3803.325714182984 3949.4662583548597 4655.78903220853 3651.843926555856 4238.419662316251 4530.006237450336 5310.380762918456 4757.869200061528 4241.619166741512 4227.3926079260655 4797.57547972273 0.7927599534927573 0.8232212864701223 0.970446228910109 0.7611852991142329 0.8834503344929562 0.9442282370744779 1.106888424239104 0.9917236779642086 0.8841172347718126 0.8811518705215624 1.0 12.228089789022306 -7.180593378435592 3.7135170156244035 0.9614304923549042 0.8438377340894883 0.39892004903846134 0.07535639564170613 0.22072544252155202 5.8320320549478595 0.011720756207900343 0.02077390397323903 6.597913560883631e-08 7.180593378435592 -0.11759275826541593 TASRPAPLVQQLS(ph)PSLLPNSK ddPTM_A549_MK2206_60min_R1 2 TASRPAPLVQQLSPSLLPNSK 21 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 TASRPAPLVQQLS(0.96)PS(0.039)LLPNSK;T(0.001)AS(0.001)RPAPLVQQLS(0.869)PS(0.13)LLPNSK 118.57 3.0244e-15 10127400.0 3411.3 4307.9 4928.1 4446.6 5445.799999999999 4062.8 3834.8 3213.0 6247.1 5501.0 6018.2 True False 3987.044041722398 4527.15370947139 5626.978683284335 5536.017199615458 4644.730034007639 4492.722799331626 4531.533521544788 3668.452589399825 4832.141824568772 4258.320279389577 4523.714846129767 0.8813650235123653 1.000760185701043 1.2438844787262526 1.2237767825599706 1.0267512856124001 0.9931489831140318 1.0017283749486796 0.8109380706297932 1.068180022156542 0.9413326047800634 1.0 12.143292276094096 -6.975644624541659 24.96479286033109 1.0095450460368143 1.0965332702744885 0.14285391060305308 0.11334978669129805 408.5412906599745 418761.8155631203 0.01677704821583397 0.0317047176965633 1.0576826381162827e-07 6.975644624541659 0.08698822423767427 TASRPAPLVQQLS(ph)PSLLPNSK ddPTM_A549_PD325901_60min_R1 2 TASRPAPLVQQLSPSLLPNSK 21 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 TASRPAPLVQQLS(0.951)PS(0.049)LLPNSK;TASRPAPLVQQLS(0.98)PS(0.02)LLPNSK 132.93 3.8409e-18 16918800.0 7338.0 8543.0 8219.6 8896.8 10667.3 9257.8 9025.400000000001 9985.8 8897.0 8899.099999999999 9839.7 True False 8082.9483580499145 9262.948591661105 8777.431484470111 9446.335129901188 9918.065648187197 9182.407546213803 9368.866535888383 9786.625385291447 8523.090030150915 8337.209307270086 8629.479278997474 0.9366669872795554 1.0734075941529144 1.0171449748807815 1.094658764972272 1.149323768854269 1.0640743490238225 1.0856815611911181 1.1340922283816415 0.9876714173118776 0.9661312157688682 1.0 13.075057791427461 -8.793124880293332 24.99790422541413 0.9941781455400075 1.071648069854643 0.3192005184297857 0.054583568597472494 171.63221517310396 135406.5294853612 0.009161174200219275 0.009753215705278574 1.6101825646301132e-09 8.793124880293332 0.0774699243146354 TASRPAPLVQQLSPSLLPNS(ph)KSPR ddPTM_A549_MK2206_60min_R1 1 TASRPAPLVQQLSPSLLPNSKSPR 24 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 TASRPAPLVQQLS(0.001)PS(0.011)LLPNS(0.494)KS(0.494)PR 43.198 0.011437000000000001 3479300.0 1102.9 1716.1 1307.9 1047.9 1599.9 1153.7 1155.8 1319.9 2265.8 1645.1 1854.2 True False 1289.0425566838544 1803.4421599442558 1493.3798867449082 1304.6355470420183 1364.556829374714 1275.783768235921 1365.7938990824716 1506.9998670242219 1752.5999177390988 1273.4707674284289 1393.7509666833637 0.9248729417934121 1.2939486343358835 1.0714825836488036 0.9360607298064096 0.9790535482977124 0.9153599163212326 0.9799411313289202 1.0812547600310196 1.2574699208350464 0.9137003653233983 1.0 10.444757090325567 -8.516484107226836 24.30865334293351 1.124097714682297 1.0199735539844519 0.0 0.1298521890410004 351.28656793605546 1335388.5592670345 0.02263524000265204 0.026129573820099932 3.044499399803384e-09 8.516484107226836 -0.10412416069784514 TASRPAPLVQQLSPSLLPNS(ph)KSPR ddPTM_A549_PD325901_60min_R1 2 TASRPAPLVQQLSPSLLPNSKSPR 24 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 TASRPAPLVQQLSPSLLPNS(0.549)KS(0.451)PR;TASRPAPLVQQLSPS(0.001)LLPNS(0.5)KS(0.5)PR 70.21300000000001 2.8314e-05 8245700.0 2938.0 3535.5 3805.0 4268.5 4427.5 4568.9 4188.2 4054.8999999999996 4762.2 4690.0 5226.299999999999 True False 3236.263597158715 3833.4489928383296 4063.230181323756 4532.155550533136 4116.527674045803 4531.692393213968 4347.584242870978 3974.0218384924874 4562.061294996595 4393.872599599594 4583.4982322453425 0.7060684728514337 0.836358780694984 0.886491054526551 0.9887983633655609 0.8981191800371259 0.9886973144950912 0.9485297086590572 0.867028116327147 0.9953230183230057 0.9586286231525706 1.0 12.162233401733914 -4.14374232954227 0.510663433926617 0.9858387128959893 9.62884334572726e-28 0.7274989479632572 0.04474261432567915 3.7532366406416995 0.2807235104633227 0.00840663603314138 2.877076873642795 7.182202908399069e-05 4.14374232954227 -0.9858387128959893 TASRPDDIPDS(ph)PSSPK ddPTM_A549_PD325901_60min_R1 1 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TASRPDDIPDS(0.996)PS(0.004)S(0.001)PK 94.837 1.7809e-06 24926000.0 4696.4 4782.6 4685.4 5754.3 7270.2 5179.5 5525.7 5515.4 5884.1 6889.1 6731.3 True False 5173.175070693048 5185.646486536161 5003.379419599039 6109.730042036508 6759.566232828414 5137.31986925775 5735.983537279063 5405.391020252401 5636.8117395089375 6454.121050298838 5903.392773226386 0.8763054178192091 0.8784180022807537 0.847543033607865 1.034952319240204 1.145030746299827 0.87023175766942 0.9716418604727483 0.9156414333072045 0.9548427414610676 1.0932901296302298 1.0 12.52732861715311 -6.2506377681089935 24.898826259333347 0.9803965982751788 0.8685217295575955 0.36360643149614424 0.07438705479114385 579.5931301649289 1336018.5539710221 0.009187037309287466 0.024041662097398782 5.615161243859969e-07 6.2506377681089935 -0.11187486871758323 TASRPDDIPDS(ph)PSSPKVALLPPVLK ddPTM_A549_MK2206_60min_R1 1 TASRPDDIPDSPSSPKVALLPPVLK 25 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TASRPDDIPDS(0.333)PS(0.333)S(0.333)PKVALLPPVLK 60.398 8.0737e-05 2098900.0 1091.4 1104.7 1090.6 1104.9 1290.2 939.07 702.9 1017.9 1371.8 1633.2 1640.7 True False 1275.6016378318602 1160.9245114447992 1245.263479229296 1375.6005496008465 1100.4132891176046 1038.4417640957836 830.6078315150285 1162.1904421880108 1061.0894903144567 1264.2589856933382 1233.2689089836017 1.0343256272333559 0.9413393161768546 1.009725835264573 1.1154100614881692 0.8922735999438354 0.8420237926468244 0.6735009903067886 0.9423658001285622 0.8603877731653459 1.0251284018302844 1.0 10.26827169215483 -6.795306374125749 24.983789515249146 0.9037569553612593 1.0181049075741517 0.30838015553565123 0.09535604765397984 210.8242026850009 155525.1238088649 0.014737735195450555 0.02785278876096713 1.6021147760736957e-07 6.795306374125749 0.1143479522128924 TASRPDDIPDSPS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TASRPDDIPDS(0.001)PS(0.5)S(0.5)PK 154.78 1.0175e-20 80760000.0 16014.0 16753.0 13316.0 12376.0 18762.0 15670.0 12312.0 13641.0 18812.0 18338.0 18911.0 True False 18716.77169528992 17605.65614215144 15204.409031191366 15408.12055557975 16002.13465387112 17328.18899909583 14548.931030890628 15574.65352381046 14551.112036591023 14195.433063705881 14214.876782951726 1.3167030556140618 1.238537372569164 1.0696124393724196 1.0839433074832638 1.1257315063794926 1.2190178827211489 1.0235003266675897 1.095658707537272 1.0236537578744653 0.9986321570321901 1.0 13.795113973085119 -2.0000000000000004 0.21525652940055157 0.9935336022811201 2.4915185764258743 0.6545992620811893 0.059650155050630455 20.58663396665413 0.23679589930313738 0.04035773042135932 10.788332087401047 0.00999999999999999 2.0000000000000004 1.4979849741447542 TASRPDDIPDSPS(ph)SPKVALLPPVLK ddPTM_A549_PD325901_60min_R1 1 TASRPDDIPDSPSSPKVALLPPVLK 25 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 T(0.001)AS(0.001)RPDDIPDS(0.092)PS(0.453)S(0.453)PKVALLPPVLK 66.87899999999999 4.1081e-05 2609400.0 1261.7 1515.4 1599.0 1470.8 1921.3 2462.7 2397.0 2251.5 1969.7 2267.9 2076.6 True False 1389.7868551855518 1643.108076296762 1707.5177555681182 1561.6479755708422 1786.3545161251725 2442.644587705584 2488.219146688729 2206.59206623242 1886.92035881626 2124.704406957765 1821.1913646519872 0.7631196161810965 0.9022160483452241 0.9375828310576297 0.8574870306774481 0.9808713959428027 1.341234444175146 1.3662590296567787 1.2116201015778918 1.0360912068001338 1.1666563153091694 1.0 10.830666808475517 -7.000829719139507 14.46349885197224 1.0861385935859242 0.8786946878264463 0.49846662114235696 0.13263864398658198 0.16628139116552193 2704.6671555421995 0.0229491510402242 0.04249579378033133 9.980913249193985e-08 7.000829719139507 -0.2074439057594779 TASS(ph)PDSLR ddPTM_A549_PD325901_60min_R1 1 TASSPDSLR 9 0 Q9UIW2;P51805 Q9UIW2 PLXNA1;PLXNA3 Plexin-A1;Plexin-A3 1 TAS(0.076)S(0.924)PDSLR 117.01 0.00018426 20021000.0 3159.2 2856.1 2966.5 2630.3 2984.3 3070.2 3061.5 3058.6 3080.7 3199.5 3269.2 True False 3479.91965831988 3096.7935704838233 3167.8245290136474 2792.7676571552793 2774.6930632760914 3045.1973091215655 3178.0070578170803 2997.5938235747176 2951.228892422831 2997.4830239699154 2867.1091251662706 1.213738126594003 1.0801101162496676 1.1048845337653264 0.9740709318112613 0.9677668139384755 1.062114198023407 1.1084360305374774 1.0455108936256061 1.0293395764110242 1.0454722485653851 1.0 11.485381100764807 -5.070144348296241 1.113166888146199 1.0223583050087581 1.364987433107146 0.5847907505560181 0.04308669023039457 1.2065380328785893 0.9069814888323766 0.006605313050818916 0.5334013146036656 8.508551888564663e-06 5.070144348296241 0.34262912809838797 TASSPDS(ph)LR ddPTM_A549_MK2206_60min_R1 2 TASSPDSLR 9 0 Q9UIW2;P51805 Q9UIW2 PLXNA1;PLXNA3 Plexin-A1;Plexin-A3 1 TASSPDS(1)LR;TASS(0.002)PDS(0.998)LR 106.29 0.00053305 40550000.0 4111.9 4937.7 4899.3 4556.299999999999 5541.2 4459.3 4322.5 4459.9 7080.7 6906.2 8054.4 True False 4805.888193696927 5189.007839378098 5594.094410221976 5672.593704540078 4726.096820383253 4931.180166156225 5107.842298653731 5092.104482870923 5476.932755554439 5346.084623435789 6054.270189868663 0.7938014067722311 0.8570823033404568 0.9239915356905026 0.9369574740870849 0.7806220522321581 0.8144962169690017 0.8436759738938141 0.8410765167686359 0.9046396318287294 0.8830270958805297 1.0 12.563737345834362 -9.679612765419673 0.761077370961934 0.9894000783933313 0.8508291102530348 0.2104578269614903 0.05634536960628405 0.3173363850649461 0.3903290556039001 0.019547270452329013 0.011044879478493455 2.0911598628175917e-10 9.679612765419673 -0.13857096814029657 TASSPDS(ph)LR ddPTM_A549_PD325901_60min_R1 2 TASSPDSLR 9 0 Q9UIW2;P51805 Q9UIW2 PLXNA1;PLXNA3 Plexin-A1;Plexin-A3 1 TASS(0.001)PDS(0.999)LR;TASS(0.003)PDS(0.997)LR 98.257 0.00083962 23050000.0 2787.3 2267.0 2257.8 2590.2 2395.5 1749.3 2605.5 2283.7 2405.6 2251.0 2505.1 True False 3070.26464409819 2458.0480460371928 2411.027885254343 2750.190771228989 2227.2483440263636 1735.0542807785655 2704.6537282843087 2238.1498119720086 2304.500997699342 2108.871475841937 2196.988581137287 1.3974877568589115 1.1188260454065566 1.0974239492889202 1.2518002118178206 1.0137732909259876 0.7897420567750071 1.2310731842239369 1.0187352957535238 1.0489362655250583 0.9598918692377838 1.0 11.101311656025725 -2.0000000000972817 0.569063132378274 1.0257056181165614 18.562636341641188 0.44911289533067955 0.1160506085610685 87.55600771146833 0.6845751957754749 0.018806715456064476 1897.974757578003 0.009999999997760006 2.0000000000972817 17.536930723524627 TAST(ph)DLK ddPTM_A549_MK2206_60min_R1 2 TASTDLK 7 0 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 T(0.011)AS(0.272)T(0.717)DLK;T(0.007)AS(0.209)T(0.783)DLK 112.41 0.0083029 179980000.0 11657.900000000001 14252.9 13006.9 11552.2 16193.5 13089.1 12857.6 14430.1 17606.1 17722.6 18544.5 True False 13625.468511709765 14978.311730941945 14851.474003289504 14382.489518597964 13811.457601399743 14474.179874158606 15193.659488529842 16475.610865327853 13618.346461164416 13719.052351119739 13939.388847837146 0.9774796198345461 1.074531451446381 1.0654322198346506 1.0317876684263363 0.9908223202728681 1.0383654572061414 1.0899803179597296 1.1819464285827876 0.976968689934886 0.9841932455488107 1.0 13.766879689283558 TAST(ph)NNIAQAR ddPTM_A549_MK2206_60min_R1 1 TASTNNIAQAR 11 0 Q9UBI6 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 1 T(0.002)AS(0.106)T(0.892)NNIAQAR 146.08 2.1261999999999994e-11 19853000.0 2853.2 3311.9 2666.9 3101.8 3544.0 2811.7 2935.0 2769.2 3547.5 4026.1 4112.3 True False 3334.750405957362 3480.4615637313545 3045.106521874757 3861.741139245095 3022.682294708411 3109.232227744594 3468.2515087446386 3161.742580319323 2743.9969141934216 3116.601213752113 3091.102416293816 1.0788223607148146 1.1259612575064317 0.9851199060320339 1.249308699345932 0.9778654627472875 1.005865160389126 1.1220111926614902 1.0228527413563357 0.887708184539363 1.0082490949907992 1.0 11.593905739903647 -8.546453541263508 6.643341921424722 0.9471513735701286 1.0759673439791348 0.27771693040309997 0.07836014432931639 0.13389276982058593 21.71132538323314 0.013056057351875988 0.014944122233242728 2.8414921378981865e-09 8.546453541263508 0.12881597040900628 TAST(ph)NNIAQAR ddPTM_A549_PD325901_60min_R1 2 TASTNNIAQAR 11 0 Q9UBI6 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 1 T(0.054)AS(0.448)T(0.497)NNIAQAR;T(0.002)AS(0.231)T(0.767)NNIAQAR 156.73 3.5441999999999997e-13 38978000.0 9845.7 8913.099999999999 9164.7 8812.599999999999 10753.7 9837.2 9623.7 9067.1 10305.7 10195.400000000001 11786.3 True False 10845.228215978741 9664.238217527165 9786.671653818092 9356.934287133265 9998.39721025102 9757.089104713272 9989.9351697907 8886.249577497649 9872.587268037134 9551.660704042155 10336.659819511562 1.0492004579184468 0.9349478831919061 0.9467924672672977 0.9052183636217804 0.967275443405612 0.943930561233689 0.966456799800417 0.8596828891209027 0.955104205848156 0.9240567911514669 1.0 13.335482449116785 -10.105476219720805 1.0851419276942333 0.9945740542927248 0.94563574582357 0.0 0.048529163907682686 0.5639122976911958 1.3302681920700237 0.015102349434492334 0.007767876830678987 7.843750670385725e-11 10.105476219720805 -0.04893830846915481 TAST(ph)PTPPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_A549_MK2206_60min_R1 1 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6;C9JSU8;C9JWW9;C9J556;C9JWH7 Q04637-9;C9JWH7 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 T(0.001)AS(0.006)T(0.769)PT(0.224)PPQTGGGLEPQANGETPQVAVIVRPDDR 161.34 2.1205e-51 109090000.0 4126.1 4299.5 4020.8 3532.6 6403.7 4178.5 5085.6 4714.8 6892.2 7617.4 7244.8 True False 4822.484806540258 4518.326185350695 4591.009900316481 4398.087158584441 5461.724212930095 4620.666096536179 6009.587690927342 5383.137338469433 5331.127704581792 5896.624049485936 5445.716213691961 0.8855556583017061 0.8297028357795135 0.8430497881570613 0.8076232741483103 1.0029395581058531 0.848495572523337 1.1035440436315174 0.9885086051555189 0.9789580461754392 1.0828004651913874 1.0 12.410906087505266 -7.029381423621895 1.4043436964724607 0.9939797197745414 0.8413688658084092 0.5465782104289247 0.06700156793956652 0.21712191873436737 0.8467258865607948 0.008724451421209116 0.019639069661546844 9.345845050895209e-08 7.029381423621895 -0.15261085396613217 TAST(ph)PTPPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_A549_PD325901_60min_R1 3 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6;C9JSU8;C9JWW9;C9J556;C9JWH7 Q04637-9;C9JWH7 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 TAS(0.009)T(0.982)PT(0.009)PPQTGGGLEPQANGETPQVAVIVRPDDR;T(0.019)AS(0.098)T(0.519)PT(0.365)PPQTGGGLEPQANGETPQVAVIVRPDDR;T(0.001)AS(0.039)T(0.735)PT(0.225)PPQT(0.001)GGGLEPQANGETPQVAVIVRPDDR 259.22 8.882299999999997e-150 579761600.0 17751.4 16574.6 18404.5 19069.2 21596.3 20186.1 19281.4 18945.8 19851.3 20291.4 20154.2 True False 19553.509060110013 17971.399710563746 19653.540045249163 20247.061174704595 20079.450391190385 20021.711094280112 20015.16422818692 18567.911156307426 19017.0188957553 19010.19754104801 17675.36116800014 1.1062579640811023 1.0167486559256034 1.1119173101158668 1.1454963201182171 1.1360135841265104 1.1327469296937396 1.1323765346545116 1.0504968458536041 1.075905533980495 1.0755196094925905 1.0 14.109452074072623 -9.813640795355987 0.5827565398095995 1.0020790572391147 1.1080226622168718 0.2352639801454881 0.04168607901446289 0.4855410468934442 0.34295278639207694 0.022976148134163394 0.009782853696014986 1.5358867884233188e-10 9.813640795355987 0.10594360497775712 TASTPT(ph)PPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_A549_MK2206_60min_R1 2 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6;C9JSU8;C9JWW9;C9J556;C9JWH7 Q04637-9;C9JWH7 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 T(0.051)AS(0.299)T(0.284)PT(0.315)PPQT(0.043)GGGLEPQANGET(0.008)PQVAVIVRPDDR;TAS(0.031)T(0.189)PT(0.773)PPQT(0.008)GGGLEPQANGETPQVAVIVRPDDR 148.39 2.9509e-40 127576000.0 3289.2700000000004 4413.4 3960.66 3745.32 5250.52 4535.65 4602.58 4440.56 6755.969999999999 6023.7 6083.6 True False 3844.4183610694545 4638.023208844461 4522.341143998079 4662.923568133807 4478.175463321784 5015.6094724792 5438.809209239491 5070.022978644653 5225.753582067181 4662.941986358661 4572.87422118159 0.8407006567690137 1.0142468356905818 0.988949383967431 1.0196920673074952 0.9792911955852274 1.0968177189844535 1.1893633951371072 1.1087169105068027 1.142772210497601 1.0196960950204745 1.0 12.15888552242207 -7.255365892803919 21.865584451358387 1.0844307142328704 0.9750848913119288 0.46234627261584016 0.06624298966145442 81.6731614596234 294033.3228984483 0.011226012710777137 0.019082705569446978 5.5543610555036966e-08 7.255365892803919 -0.10934582292094164 TASTPT(ph)PPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_A549_PD325901_60min_R1 1 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6;C9JSU8;C9JWW9;C9J556;C9JWH7 Q04637-9;C9JWH7 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 TAS(0.023)T(0.138)PT(0.839)PPQTGGGLEPQANGETPQVAVIVRPDDR 242.16 1.2302999999999996e-131 107670000.0 3015.8 3408.2 3595.6 3794.0 3908.4 4081.3 4057.9 3847.7 3521.0 4240.8 2881.4 True False 3321.961795885381 3695.4209750789387 3839.6190380992657 4028.346763200828 3633.8874672480224 4048.0632459507015 4212.325605068085 3770.9546050377426 3373.0246146073287 3973.0351642605438 2527.006066699527 1.3145840208544217 1.4623712320190254 1.5194340404232258 1.5941183585926932 1.43802087186683 1.6019206678192892 1.6669234239590571 1.4922617934047593 1.3347908653867104 1.5722301646270471 1.0 11.303213412493179 -9.687058228023808 0.7474261668716664 1.0357642492304886 1.5187592738278948 0.0 0.18630778331404788 0.1947447944322805 0.23110868523546274 0.04183121138691481 0.023253845373855952 2.0556149709720157e-10 9.687058228023808 0.4829950245974062 TAT(ph)NIIK ddPTM_A549_PD325901_60min_R1 2 TATNIIK 7 0 Q86SQ4-2;Q86SQ4;Q86SQ4-4;Q86SQ4-3 Q86SQ4-2 GPR126 G-protein coupled receptor 126 1 T(0.044)AT(0.956)NIIK;T(0.102)AT(0.898)NIIK 66.92 0.025338 16792500.0 6426.5 6308.2 7778.4 6894.200000000001 8549.2 6449.6 7867.299999999999 7883.5 7506.1 8722.9 10363.9 True False 7078.913549060751 6839.814152629823 8306.288999318975 7320.039076135779 7948.733685138881 6397.076595958068 8166.6944066517435 7726.257408013888 7190.644720165882 8172.134605340568 9089.20600217506 0.778826395547285 0.7525205338060382 0.9138629927995104 0.8053551734204377 0.8745245385830993 0.7038102772043277 0.8985047103891629 0.8500475625885235 0.7911191272862723 0.8991032443741471 1.0 13.14993855633602 -10.830252430151612 0.7681535905741922 1.017478653512908 0.81787505777652 0.3258976919656943 0.06675975851558176 0.4796015192354263 0.4275091983761846 0.0616694577929003 0.010810160137963449 1.4782489181964418e-11 10.830252430151612 -0.19960359573638786 TAT(ph)NIIKK ddPTM_A549_MK2206_60min_R1 1 TATNIIKK 8 1 Q86SQ4-2;Q86SQ4;Q86SQ4-4;Q86SQ4-3 Q86SQ4-2 GPR126 G-protein coupled receptor 126 1 T(0.074)AT(0.926)NIIKK 58.223 0.009297399999999999 45553000.0 2411.1 3707.4 3702.0 3061.6 4722.4 3607.8 2833.7 3461.4 5026.2 4718.3 4849.6 True False 2818.0347342646137 3896.0908244142706 4226.999266556806 3811.6921374404455 4027.741215725451 3989.5750013361803 3348.5466099930795 3952.0640500929208 3887.7737251920985 3652.4327529983316 3645.3104778490115 0.7730575355346554 1.0687953325482544 1.159571809381524 1.0456426580403684 1.1049103334819645 1.0944403845925106 0.9185902354108824 1.0841501908021056 1.0665137438405952 1.001953818527283 1.0 11.831825981457712 -5.258695083971566 24.74826499783395 1.0473883742302006 0.7730574215332969 0.6344694906341687 0.061189146198282494 109.84890638652544 990561.2685614849 0.008346812729129197 0.07973876948004452 5.511945515796913e-06 5.258695083971566 -0.27433095269690366 TAT(ph)NIIKK ddPTM_A549_PD325901_60min_R1 1 TATNIIKK 8 1 Q86SQ4-2;Q86SQ4;Q86SQ4-4;Q86SQ4-3 Q86SQ4-2 GPR126 G-protein coupled receptor 126 1 T(0.071)AT(0.929)NIIKK 46.606 0.024262 73942000.0 2430.5 2159.7 3013.7 2725.0 3843.9 3295.8 3606.7 3338.4 3404.2 3327.7 3619.9 True False 2677.242570760467 2341.7054984678084 3218.227804850302 2893.3170610759744 3573.9177247351054 3268.960097519008 3743.9549421619695 3271.812993075865 3261.1333124243833 3117.5884540911634 3174.6752484367353 0.8433122638540076 0.7376204856294843 1.0137187438100992 0.9113741830761094 1.1257585249058037 1.0296990531956616 1.1793190323972689 1.0305976948939777 1.0272336718630422 0.982018068029578 1.0 11.632393304442202 -5.771839471606233 24.071893559558134 1.0273059682536605 0.7904663906109722 0.6369152669687732 0.07059759662104911 51.06807330144931 118203.31812861183 0.009333131705952761 0.029512977193604583 1.6910658853029064e-06 5.771839471606233 -0.23683957764268826 TAT(ph)PPGYKPGS(ph)PPSFR ddPTM_A549_PD325901_60min_R1 1 TATPPGYKPGSPPSFR 16 1 P54259 P54259 ATN1 Atrophin-1 2 T(0.022)AT(0.978)PPGYKPGS(0.868)PPS(0.132)FR 81.884 0.0001199 15731000.0 3470.0 2885.0 3248.6 3409.1 4340.9 2981.0 3180.9 3455.0 3577.8 3301.2 3649.8 True False 3822.2718455210156 3128.1290749083823 3469.0695314187537 3619.6723643721507 4036.0101592920237 2956.7237243474005 3301.9508901552695 3386.0873146049325 3427.4375081346498 3092.761668613683 3200.897737988453 1.194124948185022 0.977266170606937 1.083780181493342 1.1308303671853226 1.2608994381146277 0.923717021402096 1.0315702532347444 1.0578555117268003 1.0707738230614519 0.9662169559210203 1.0 11.644260871182073 -7.276725376130989 24.99877238258007 1.029224649285299 1.118476681584135 0.35825172052467613 0.07734883102224274 892.8747759789273 1460207.693896431 0.011274508874129448 0.018060667620797204 5.287795170708012e-08 7.276725376130989 0.08925203229883594 TAT(ph)PPGYKPGSPPS(ph)FR ddPTM_A549_MK2206_60min_R1 1 TATPPGYKPGSPPSFR 16 1 P54259 P54259 ATN1 Atrophin-1 2 T(0.067)AT(0.924)PPGY(0.014)KPGS(0.471)PPS(0.525)FR 43.768 0.032813 6104100.0 2080.8 2423.7 2480.2 2184.8 2526.7 2006.7 2652.8 2042.2 2613.1 2554.7 3158.6 True False 2431.988169324294 2547.0559775402885 2831.9296544878957 2720.0760980793993 2155.0257770992516 2219.047662060346 3134.779421600608 2331.6881039752 2021.237022263235 1977.5914956837928 2374.2324470747885 1.0243260605424984 1.0727913270153602 1.1927769153256331 1.1456654555583692 0.9076726163667698 0.9346379141580511 1.3203338306082304 0.9820808012492602 0.8513222977613387 0.8329392929156184 1.0 11.213245472306376 -8.511444203790953 24.83135632360078 0.9291021543941373 1.0839489715628474 0.33424175852397175 0.11634599015570744 516.7928707303388 1122273.9525330444 0.019727008829130806 0.02316068088813378 3.0800360253115047e-09 8.511444203790953 0.15484681716871007 TAT(ph)PPGYKPGSPPS(ph)FR ddPTM_A549_PD325901_60min_R1 1 TATPPGYKPGSPPSFR 16 1 P54259 P54259 ATN1 Atrophin-1 2 T(0.153)AT(0.84)PPGY(0.005)KPGS(0.342)PPS(0.661)FR 57.068000000000005 0.0049731 14957000.0 2852.6 3086.8 3181.9 3110.2 3979.1 3662.6 3006.8 3399.0 2710.2 2748.3 3321.1 True False 3142.193852026869 3346.9354691255407 3397.842868319072 3302.309990223304 3699.6217431497844 3632.7729999311596 3121.2254193840945 3331.204278536082 2596.299718974376 2574.7718689721873 2912.6257541874743 1.0788182613263464 1.1491127771268452 1.1665909578098053 1.1337913858227688 1.2702015484930902 1.2472501812868788 1.0716191103153974 1.143711743174288 0.8913948917885117 0.8840036744406468 1.0 11.508104624910043 -8.718405448220278 8.073178848145847 0.9487624478646421 1.1611563230982234 0.7190309424889711 0.06424873618008553 0.10443723423205718 17.185208492169735 0.01168927221342395 0.01320952357862351 1.912469649779567e-09 8.718405448220278 0.21239387523358122 TATCHSS(ph)SSPPIDAASAEPYGFR ddPTM_A549_PD325901_60min_R1 1 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)AT(0.005)CHS(0.066)S(0.32)S(0.32)S(0.287)PPIDAASAEPYGFR 59.661 0.00037555 25500000.0 2514.2 3186.4 2450.1 3421.2 3047.2 3189.3 2814.1 2852.1 3186.3 3364.2 3314.9 True False 2769.4397331437835 3454.9291106717724 2616.3785196481826 3632.5197538910556 2833.175184269311 3163.327398209044 2921.192115434607 2795.2126280708335 3052.390891656725 3151.7838378620377 2907.1883148824363 0.9526179363636362 1.1884091212754775 0.8999687107486143 1.249495856630791 0.9745413359587893 1.0881054323228339 1.0048169568102907 0.9614831670042224 1.0499460513207797 1.0841347365519707 1.0 11.505408810607403 -7.772094440530636 24.787154771447156 1.017259372972376 1.0623559194693248 0.03599965196853672 0.09853548360962355 464.6672069135287 1080966.3950791145 0.013280862763476741 0.018456558316839573 1.6900733727900223e-08 7.772094440530636 0.04509654649694883 TATCHSSS(ph)SPPIDAASAEPYGFR ddPTM_A549_MK2206_60min_R1 1 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TAT(0.001)CHS(0.016)S(0.088)S(0.506)S(0.388)PPIDAASAEPYGFR 80.711 1.7941e-05 13256000.0 1582.8 2254.9 2029.0 1541.3 2403.1 1971.2 1477.4 1654.9 2973.7 2902.4 3307.5 True False 1849.9379442553309 2369.6647785433825 2316.7427098443445 1918.9185691915866 2049.60717336732 2179.791075623338 1745.8244562246448 1889.4871429186956 2300.161698023108 2246.745824195657 2486.1564676438484 0.7440955419867571 0.9531438625780194 0.93185716184627 0.7718414324140114 0.824407956635871 0.8767714759679405 0.7022182549432125 0.7600033093288688 0.925187826252541 0.9037025036179308 1.0 11.279701380726785 -8.985433874068407 3.532957388960684 0.9696545170315091 0.8252819999605943 0.32381987957020986 0.0771552965157515 0.16264259304570575 4.126387379927585 0.014364012172628466 0.01465053162035639 1.0341085429669916e-09 8.985433874068407 -0.1443725170709148 TATCHSSSS(ph)PPIDAASAEPYGFR ddPTM_A549_MK2206_60min_R1 1 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TATCHS(0.021)S(0.116)S(0.352)S(0.511)PPIDAASAEPYGFR 79.558 2.1264000000000002e-05 14360000.0 1761.0 2130.3 1947.7 1882.2 2158.1 1803.0 1232.9 1767.8 2789.3 2781.3 3227.3 True False 2058.213747683623 2238.7231707530136 2223.9131473454067 2343.339084495168 1840.6463488177826 1993.7922632654636 1456.9019710839066 2018.391063660443 2157.5280035968185 2153.0023983032593 2425.872341051246 0.8484427283554833 0.9228528364286754 0.9167478064330785 0.9659779061084837 0.7587564760395193 0.8218867207173228 0.6005682765864594 0.8320269082196543 0.889382333557527 0.8875167756644031 1.0 11.244287916827782 -9.695942039800393 1.0719913810264576 0.9795580787159154 0.8371147988510717 0.13228396155927502 0.09709999478356299 0.440422192050954 1.042724145027315 0.029677469592846426 0.019681319451723914 2.013993015994669e-10 9.695942039800393 -0.14244327986484373 TATDS(ph)DERIDDEIDTEVEETQEEK ddPTM_A549_MK2206_60min_R1 1 TATDSDERIDDEIDTEVEETQEEK 24 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 T(0.017)AT(0.017)DS(0.965)DERIDDEIDTEVEETQEEK 149.57 1.3328e-28 16300000.0 3571.8 3791.1 3445.3 3417.6 5099.5 3566.9 3727.0 3663.0 5616.1 4821.3 5288.4 True False 4174.632517874141 3984.0507969026658 3933.8953465878362 4254.912153421892 4349.370305266801 3944.346990483404 4404.147656930587 4182.241467467025 4344.062317068829 3732.164981461729 3975.1443275851007 1.0501838861308035 1.0022405398605931 0.989623274629044 1.070379287588471 1.0941414818789843 0.9922525235403451 1.1079214473719765 1.0520980177863721 1.092806187419073 0.9388753398367848 1.0 11.956791526671974 -6.265127221184557 24.874911389434715 1.0512018412087016 1.0128383648258092 0.04881541841204262 0.05038060816377846 454.6618111867877 3066748.1508092736 0.006104571996329499 0.014705102776954273 5.430912163489994e-07 6.265127221184557 -0.03836347638289239 TATDS(ph)DERIDDEIDTEVEETQEEK ddPTM_A549_PD325901_60min_R1 2 TATDSDERIDDEIDTEVEETQEEK 24 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 T(0.13)AT(0.113)DS(0.756)DERIDDEIDTEVEETQEEK;T(0.017)AT(0.015)DS(0.968)DERIDDEIDTEVEETQEEK 123.71 8.181300000000001e-17 82892000.0 1834.5900000000001 1351.76 1793.54 1844.29 1911.86 1958.9 1758.12 1913.09 1511.6100000000001 1408.2 1886.73 True False 2020.8362262462247 1465.677559202133 1915.2604098321713 1958.2076046135087 1777.5775491589402 1942.9473678712243 1825.026218680179 1874.931919159928 1448.0822884653746 1319.286011675084 1654.6741709668902 1.2212895213475 0.885780164408852 1.1574849256956796 1.1834400022508673 1.0742764831581513 1.1742174997122756 1.1029520196195155 1.1331124592730741 0.8751464873711082 0.7973086392616947 1.0 10.692331442353701 -8.752035772551805 24.998099901533546 0.9410413958073468 1.1125270269978924 0.4974529234231553 0.09749355720868344 132.73254195476252 352849.69714986504 0.015003219315644349 0.016901491821290415 1.7699631616074596e-09 8.752035772551805 0.1714856311905456 TATDSDERIDDEIDT(ph)EVEETQEEK ddPTM_A549_MK2206_60min_R1 2 TATDSDERIDDEIDTEVEETQEEK 24 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 TATDSDERIDDEIDT(1)EVEETQEEK;TATDSDERIDDEIDT(1)EVEETQEEK 195.54 1.5472999999999997e-61 94827000.0 1781.82 1833.25 1570.1399999999999 1495.1100000000001 2512.01 1497.4 1864.29 1805.5 2142.85 2507.9 2925.2 True False 2082.5476546834943 1926.554594556148 1792.809462018234 1861.4120171180375 2142.4966566395256 1655.8538741063244 2203.007361239368 2061.435154111852 1657.497896428294 1941.3636481878052 2198.7921085870853 0.9471325854547076 0.8761876973417585 0.8153610589271533 0.8465611686746303 0.9743971011503518 0.7530743209599539 1.0019170764875045 0.9375307224640274 0.7538220143483143 0.882922783198135 1.0 11.102495491361283 -11.165808155369648 1.5719298647066826 0.9998004157438452 0.86153627661113 0.0 0.08724814880918424 0.43153615261530004 1.9183034082456554 0.061015124932439824 0.013011137244541032 6.826401760548007e-12 11.165808155369648 -0.13826413913271518 TATDSDERIDDEIDT(ph)EVEETQEEK ddPTM_A549_PD325901_60min_R1 2 TATDSDERIDDEIDTEVEETQEEK 24 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 TATDSDERIDDEIDT(1)EVEETQEEK;TATDSDERIDDEIDT(1)EVEETQEEK 165.37 1.4731e-34 198533000.0 1963.96 1907.22 2069.82 1958.33 2104.1 1960.21 2060.0699999999997 2449.3999999999996 2127.83 2323.3999999999996 2267.79 True False 2163.3397734090636 2067.9481227891715 2210.290432038776 2079.291596409877 1956.3152747509375 1944.2466996655546 2138.46709116356 2400.544795482872 2038.4047048281466 2176.7001274860745 1988.8662067052533 1.0877251401404433 1.0397623107161769 1.1113318857683911 1.045465798252172 0.983633422980101 0.9775653551308435 1.0752191796280428 1.2069915952061971 1.0249079088155248 1.0944427132139702 1.0 10.957730512359573 -8.982035723631872 24.96088694779092 1.0109887065893088 1.0639987815065348 0.0 0.0641884539912884 170.7067192481341 237196.19234649328 0.011013048673315696 0.011167524632984352 1.042231695325048e-09 8.982035723631872 0.05301007491722598 TATESFASDPILYRPVAVALDTKGPEIR ddPTM_A549_PD325901_60min_R1 1 TATESFASDPILYRPVAVALDTKGPEIR 28 2 P14618;P14618-2;H3BTN5;P14618-3;H3BQ34;H3BT25;H3BUW1;H3BTJ2 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 65.275 0.00017984 4815200.0 1853.4 1734.9 2276.0 2482.6 2597.9 2367.3 2904.8 2953.0 3004.0 2711.5 2610.1 False True 2041.5558035990332 1881.1061116320789 2430.463046699834 2635.9445636063183 2415.4324662684567 2348.0214936758143 3015.343753567553 2894.100098416316 2877.7523266913977 2540.295427252514 2289.0742467871282 0.8918696309062478 0.8217759272213819 1.0617668038121326 1.1515330126604877 1.0552005771148232 1.0257515661501249 1.317276518138192 1.2643102784797753 1.2571686264569701 1.1097479388525697 1.0 11.160548542546692 -5.8839700064723965 3.8434005312751696 1.1374348207920988 0.856508067037718 0.5606014939035947 0.0978092182747405 0.15287950708743867 4.185324218862749 0.01706912177653815 0.05976933205014825 1.3062610988691962e-06 5.8839700064723965 -0.2809267537543808 TATNNASSSCQST(ph)PR ddPTM_A549_MK2206_60min_R1 1 TATNNASSSCQSTPR 15 0 Q92833-2;Q92833-3;Q92833 Q92833-2 JARID2 Protein Jumonji 1 TATNNAS(0.012)S(0.092)S(0.092)CQS(0.092)T(0.713)PR 68.809 0.0131 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TATPPGYKPGS(ph)PPSFR ddPTM_A549_MK2206_60min_R1 3 TATPPGYKPGSPPSFR 16 1 P54259 P54259 ATN1 Atrophin-1 1 T(0.005)AT(0.024)PPGY(0.005)KPGS(0.953)PPS(0.013)FR;TATPPGYKPGS(0.978)PPS(0.022)FR;TATPPGYKPGS(0.947)PPS(0.053)FR 139.44 1.4126e-11 96165000.0 25602.7 27624.300000000003 28505.0 25224.0 35886.7 28111.8 26365.9 27121.3 40836.3 38939.8 41236.1 True False 29923.809834082625 29030.25887707483 32547.437626472645 31403.881132348408 30607.81396882404 31086.57201689743 31156.242744262447 30965.827330497777 31586.943252171066 30143.272135134383 30996.038311536948 0.9654075638093649 0.9365796552867712 1.0500515355976399 1.0131579015586536 0.9874750334603759 1.0029208153780989 1.005168545448141 0.9990253276649254 1.0190638859939136 0.9724878977167492 1.0 14.91979621203151 -5.743903287310315 24.999984112584123 1.008738252940234 0.9509935841787839 0.5295311193187677 0.019614388160462116 106.77669862293521 152221.56332345746 0.0021725573532383755 0.008377822541176699 1.8034192981430659e-06 5.743903287310315 -0.057744668761450124 TATPPGYKPGS(ph)PPSFR ddPTM_A549_PD325901_60min_R1 2 TATPPGYKPGSPPSFR 16 1 P54259 P54259 ATN1 Atrophin-1 1 TATPPGYKPGS(0.992)PPS(0.008)FR;TATPPGYKPGS(0.923)PPS(0.077)FR 141.83 8.841500000000001e-15 188904000.0 33234.0 33824.0 33942.0 37610.0 43394.0 40693.0 38087.0 43065.0 41845.0 45464.0 48731.0 True False 36607.891214422285 36674.467185338304 36245.50822982681 39933.08428149265 40346.155141173054 40361.609699721135 39536.421627006115 42206.03479116108 40086.4001699073 42593.395281065204 42737.39593126071 0.8565774871567471 0.8581352790966935 0.8480981922278202 0.9343827205972366 0.9440480464946026 0.9444096632522764 0.9251013255603342 0.9875668339513648 0.9379701148470229 0.9966305703223678 1.0 15.383211384142617 -2.0000000000012528 0.18043344106499223 0.9949784958231214 0.3160592847990841 0.8105071525586389 0.02289472841389658 17.761071626905583 0.1867591505781426 0.02636800440652032 3.3454641056654095 0.009999999999971153 2.0000000000012528 -0.6789192110240373 TATPQQAQEVHEK ddPTM_A549_MK2206_60min_R1 2 TATPQQAQEVHEK 13 0 P60174;P60174-3;P60174-4;U3KPZ0 P60174 TPI1 Triosephosphate isomerase 0 ; 148.52 1.2539e-12 52848000.0 7258.1 7876.5 7866.799999999999 7294.0 9584.3 6807.5 7633.0 7152.6 10307.0 11491.9 10670.7 False True 8483.089836492054 8277.3802067484 8982.430532185062 9081.030327440107 8174.462166245439 7527.865131547219 9019.81729684765 8166.5029539188245 7972.4809568968585 8895.871808528826 8020.870693662045 1.0576270532817897 1.0319802578651522 1.1198822266618542 1.1321751308889423 1.0191489775174607 0.9385346577766936 1.1245434119733355 1.018156664758585 0.9939670219589224 1.1090905399532487 1.0 12.969543139452806 -7.613407916593983 0.6049667539074256 0.9967438976363342 1.0788755819324611 0.0 0.06260069556824382 0.8225368200282736 0.6034818751947605 0.012240667618172515 0.027548364897379128 2.4355221486734757e-08 7.613407916593983 0.08213168429612694 TATPQQAQEVHEK ddPTM_A549_PD325901_60min_R1 2 TATPQQAQEVHEK 13 0 P60174;P60174-3;P60174-4;U3KPZ0 P60174 TPI1 Triosephosphate isomerase 0 ; 173.06 9.3265e-22 70760000.0 7400.4 7266.4 7039.8 7445.3 9470.7 8185.5 7212.700000000001 8639.3 8965.8 8475.1 9698.0 False True 8151.683160113455 7878.765029433013 7517.563161756366 7905.179271496869 8805.510704141305 8118.84000189388 7487.183245440882 8466.982384100258 8588.998605409368 7939.980739630386 8505.207480687164 0.9584343684294053 0.9263460118196272 0.8838776924403726 0.9294516670460087 1.0353081596346758 0.9545728332118162 0.8803057729564014 0.9955056832330423 1.0098517437596284 0.933543450604792 1.0 13.054130714872604 -8.488554821917436 23.03587664050501 1.004548349961344 0.9396520226147616 0.15471437593753068 0.044445946018456944 192.31762834740417 129070.48825193055 0.006555680132484033 0.007922260383721349 3.2467225551062154e-09 8.488554821917436 -0.06489632734658235 TATSLPVVNFGS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 TATSLPVVNFGSPLR 15 0 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 TAT(0.001)S(0.003)LPVVNFGS(0.997)PLR 44.425 0.055613 628040.0 457.84 549.06 562.66 444.45 867.95 890.94 661.66 878.87 1170.9 911.37 833.73 True False 535.112198886695 577.0048087751256 642.4536486550113 553.3402699521188 740.2757047664126 985.2186794418924 781.8750573342344 1003.452513926493 905.6930195430808 705.4908840260453 626.6918312225869 0.8538681569261354 0.92071538199161 1.0251508263665658 0.8829543363803393 1.1812435839832787 1.5720943378500252 1.2476228640301679 1.6011897138804243 1.4451967847996394 1.125738120201332 1.0 9.291612377840313 -6.8699359316884605 4.812021278696591 1.2769199871103136 0.9291026389208232 0.5318246643748207 0.17575717090767223 0.18537207738238445 7.099326470562222 0.03224183443147388 0.062367776315001996 1.3491618999704498e-07 6.8699359316884605 -0.3478173481894904 TATSLPVVNFGS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 TATSLPVVNFGSPLR 15 0 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 TATSLPVVNFGS(1)PLR;TATS(0.001)LPVVNFGS(0.999)PLR 121.79 4.6826e-07 2672500.0 2560.2 2845.3 3037.6 3630.1000000000004 3574.5 2908.3 2738.2 3102.3 3157.0 3021.5 3137.7 True False 2820.1096192803743 3085.083416581219 3243.7498025726804 3854.3230324447363 3323.439451355556 2884.6157690437917 2842.403699400535 3040.422192792731 3024.3222687632306 2830.7219743475835 2751.7827915190887 1.024830022184842 1.121121705568242 1.1787811932576289 1.4006639783938046 1.2077404734117445 1.0482716070229416 1.0329317081859575 1.1048917822159583 1.0990410573407539 1.0286865602444288 1.0 11.426150881894873 -7.2639371339771905 24.207355401763934 1.0516426596949746 1.1944432819045718 0.36321290890486035 0.08828224012425663 126.3437387057075 1224483.0349548021 0.014114810042451362 0.02321519103504607 5.44581477684233e-08 7.2639371339771905 0.14280062220959722 TATSLPVVNFGS(ph)PLRR ddPTM_A549_MK2206_60min_R1 2 TATSLPVVNFGSPLRR 16 1 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 TATSLPVVNFGS(1)PLRR;TATSLPVVNFGS(1)PLRR 145.52 9.2402e-15 14131500.0 2632.3999999999996 2823.7 3516.2 3229.3999999999996 4432.0 3499.7 3691.7 3660.8 5658.0 4824.2 4426.1 True False 3076.684763999072 2967.4142690021504 4014.8500327031434 4020.603144973274 3780.0586710349003 3870.0359310871536 4362.43410386119 4179.729610729808 4376.472033969379 3734.4098694475883 3326.977215854402 0.924768810960717 0.8919250347917059 1.206756094863153 1.2084853259028832 1.13618411722851 1.163228865122627 1.3112305317488844 1.2563144679235234 1.3154499565292201 1.1224633134400812 1.0 11.699996270904983 -5.759668387947718 24.99999997741546 1.1766690186831081 0.90834682551821 0.610917603401949 0.086411860258489 32.13010432651397 453520.47309028707 0.01692099593144966 0.059437091233617956 1.7391282593092322e-06 5.759668387947718 -0.26832219316489814 TATSLPVVNFGS(ph)PLRR ddPTM_A549_PD325901_60min_R1 4 TATSLPVVNFGSPLRR 16 1 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 TATSLPVVNFGS(1)PLRR;TATSLPVVNFGS(1)PLRR;TATSLPVVNFGS(1)PLRR;TATSLPVVNFGS(1)PLRR 156.67 1.299e-20 27491500.0 4787.2300000000005 5801.25 5474.95 5237.35 6567.26 6445.0 5863.04 6382.5 7121.679999999999 6084.719999999999 6508.5 True False 5273.2260654275415 6290.1416969886495 5846.513030548881 5560.849214615143 6105.998313417063 6392.51405683294 6086.161195578596 6255.196030525611 6822.380555909314 5700.5297407751905 5707.995760780822 0.9238314614140838 1.1019878010785686 1.024267234169969 0.9742209783727046 1.069727198357589 1.1199227057517085 1.0662518773044853 1.095865570451989 1.1952322394465218 0.998692006736072 1.0 12.478768548014173 -6.944915336391699 6.60814434893883 1.0942575371101764 1.0145753987983632 0.19695186649867757 0.06555209442140421 0.2748619712268134 25.257669384707754 0.011244137093281557 0.021334341006018637 1.1352321021087526e-07 6.944915336391699 -0.07968213831181314 TATSLSLPSDPMGDS(ph)SPGSGKK ddPTM_A549_MK2206_60min_R1 2 TATSLSLPSDPMGDSSPGSGKK 22 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 TATSLSLPSDPMGDS(0.488)S(0.488)PGS(0.024)GKK;TATSLS(0.001)LPS(0.038)DPMGDS(0.436)S(0.436)PGS(0.088)GKK 117.62 2.2296999999999995e-15 11661700.0 2667.3 2815.8 2835.2 2820.8 3115.3 2536.0 2658.2 2779.8999999999996 4533.2 3981.5 4096.8 True False 3117.475030775997 2959.112192745781 3237.273992582891 3511.8961266305255 2657.0434968129557 2804.3578367394425 3141.1605317018757 3173.9593380866986 3506.437438032872 3082.0763847281587 3079.451494072054 1.0123475030462854 0.9609218389840118 1.0512501979052584 1.140429109986284 0.8628301182622184 0.9106679686748868 1.0200389704947819 1.0306898303793945 1.1386564928146345 1.00085238902485 1.0 11.588457688422277 -8.31125749288925 3.1911618989666333 1.065761751153432 0.9915907023626042 0.06811902466500919 0.07694508742833503 0.395085946743763 8.099219866286269 0.014190525082537701 0.017671159691034787 4.883627235776375e-09 8.31125749288925 -0.07417104879082792 TATSLSLPSDPMGDS(ph)SPGSGKK ddPTM_A549_PD325901_60min_R1 1 TATSLSLPSDPMGDSSPGSGKK 22 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 TATSLSLPSDPMGDS(0.489)S(0.489)PGS(0.021)GKK 125.05 3.0746e-16 33515000.0 7687.7 8501.1 7142.5 9965.3 9015.3 8353.8 8517.9 8146.0 11836.0 9076.6 8972.3 True False 8468.149644614377 9217.517531613044 7627.23300134164 10580.83394816162 8382.096429096584 8285.769422493562 8842.053345673732 7983.521639586625 11338.574080798728 8503.501926977757 7868.763980095833 1.0761727847009646 1.1714060244949405 0.9693050929770991 1.344662767230789 1.0652367322617928 1.052995037524642 1.1236902476729318 1.0145839498784146 1.4409599918716378 1.0806655211018532 1.0 12.941921320670486 TATSLSLPSDPMGDSS(ph)PGSGKK ddPTM_A549_PD325901_60min_R1 3 TATSLSLPSDPMGDSSPGSGKK 22 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 TATSLSLPSDPMGDS(0.203)S(0.795)PGS(0.002)GKK;TATSLSLPSDPMGDS(0.176)S(0.788)PGS(0.036)GKK;TATSLSLPSDPMGDS(0.305)S(0.641)PGS(0.054)GKK 132.84 3.1299e-22 61646000.0 12610.6 14240.5 13539.599999999999 15456.2 16723.0 14884.5 13248.7 13112.099999999999 19242.7 15248.9 15950.2 True False 13890.818828566935 15440.596912039093 14458.478676228944 16410.894370422928 15548.434171218072 14763.28556694024 13752.886528466825 12850.568879256543 18433.996237291794 14286.08185160645 13988.426516648426 0.9930222539350425 1.1038122760742501 1.0336029330404732 1.1731765792879838 1.1115213103284343 1.0553928670511734 0.9831617953669577 0.9186572102274939 1.3178034152270408 1.021278685962554 1.0 13.7719460701224 -8.748874162149464 24.999728594155822 1.1500738524314942 1.0525903475210217 0.043692728285692595 0.10205006106484704 388.7421190594347 773439.4350200541 0.021783544078487444 0.024617883590918453 1.7828952907284988e-09 8.748874162149464 -0.09748350491047253 TATTLPDDMITQREDAEGVAAEEEQEGDS(ph)GEQETGATDARPR ddPTM_A549_MK2206_60min_R1 3 TATTLPDDMITQREDAEGVAAEEEQEGDSGEQETGATDARPR 42 2 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 TATTLPDDMITQREDAEGVAAEEEQEGDS(0.986)GEQET(0.011)GAT(0.003)DARPR;TATTLPDDMITQREDAEGVAAEEEQEGDS(0.999)GEQET(0.001)GATDARPR;TATTLPDDMITQREDAEGVAAEEEQEGDS(0.987)GEQET(0.011)GAT(0.002)DARPR 149.46 2.3654e-41 44039000.0 1297.8600000000001 1824.2 1168.1100000000001 1815.02 2622.78 1447.27 1864.07 1415.25 2455.15 2566.53 3319.58 True False 1516.9070383694875 1917.0439882118237 1333.7655627384313 2259.6999814793435 2236.972536375657 1600.4191507799255 2202.7473900870946 1615.8660215213513 1899.0624450689168 1986.749090467502 2495.23667025281 0.607921106824628 0.7682814263937514 0.5345246720036773 0.905605471584544 0.89649713914673 0.6413897206062524 0.8827809467323668 0.6475802639425127 0.7610750786523626 0.7962166932510695 1.0 11.28496094463617 -14.999999999992655 0.19573632761012355 2.207817837389164 0.6957447555330085 0.09620299967927348 0.13258628590394764 33.83034255645885 0.39367780117188095 15.587326454919754 0.10281976719121727 1.000000000016913e-15 14.999999999992655 -1.5120730818561556 TATTLPDDMITQREDAEGVAAEEEQEGDS(ph)GEQETGATDARPR ddPTM_A549_PD325901_60min_R1 2 TATTLPDDMITQREDAEGVAAEEEQEGDSGEQETGATDARPR 42 2 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 TATTLPDDMITQREDAEGVAAEEEQEGDS(1)GEQETGATDARPR;TATTLPDDMITQREDAEGVAAEEEQEGDS(0.941)GEQET(0.048)GAT(0.011)DARPR 151.63 1.2372e-41 34445000.0 1899.1499999999999 2032.01 1823.6000000000001 1551.3000000000002 1865.0300000000002 1646.0900000000001 2269.2200000000003 1994.3400000000001 2462.8999999999996 1802.5900000000001 2851.0 True False 2091.9503099196627 2203.254614039714 1947.3604621976358 1647.1202777420783 1734.0367268042116 1632.6847887994 2355.576408864832 1954.5613241705364 2359.3928779654607 1688.774159768066 2500.3450739780465 0.8366646394896893 0.8811802166707886 0.7788366823701607 0.658757183112134 0.693518964582501 0.6529837844349221 0.9421005257954704 0.7817166296413764 0.9436269027505347 0.6754164364526005 1.0 11.287911500414227 -8.663003627407038 1.0644693334725375 0.983687345849785 0.7603898017636684 0.0 0.12536254134624003 0.2544469583643074 0.5678367531272615 0.01860740053071918 0.020500414116683397 2.172683031641151e-09 8.663003627407038 -0.22329754408611657 TAVAPIER ddPTM_A549_MK2206_60min_R1 2 TAVAPIER 8 0 P05141;Q9H0C2;P12236;P12235;V9GYG0 P05141;P12236 SLC25A5;SLC25A31;SLC25A6;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 0 ; 117.04 0.0035242 25144000.0 5938.3 6579.0 6423.2 5962.0 7461.6 6098.299999999999 5617.3 6011.1 9476.2 8838.5 8961.0 False True 6940.539862504064 6913.842998818979 7334.106344934542 7422.6902676443515 6364.00852432175 6743.618058276076 6637.8906984910645 6863.191833221689 7329.855830381875 6841.876711395155 6735.736388981568 1.0304055060494228 1.0264420398234053 1.0888351208238787 1.101986455376507 0.9448125871927089 1.0011701273386235 0.9854736461108304 1.0189222732125645 1.0882040814976337 1.015757790430637 1.0 12.717619962592693 TAVAPIER ddPTM_A549_PD325901_60min_R1 2 TAVAPIER 8 0 P05141;Q9H0C2;P12236;P12235;V9GYG0 P05141;P12236 SLC25A5;SLC25A31;SLC25A6;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 0 ; 126.41 0.0029823000000000002 44047000.0 10739.1 11301.5 11973.2 11455.9 14246.4 11608.5 12808.9 13291.4 13572.3 13712.099999999999 14365.2 False True 11829.325526292421 12253.917067617705 12785.773352700553 12163.504924763403 13245.78201141189 11513.964224785906 13296.349698799027 13026.29260009841 13001.903429944623 12846.315665878366 12598.371468505597 0.9389567180063155 0.9726588153279188 1.0148750879955746 0.9654823208833533 1.0513884309987795 0.9139248079459653 1.0554022583028522 1.0339663846761913 1.032030486039232 1.0196806545983026 1.0 13.620949635008209 -7.799582793068865 24.999915298692404 1.0199686446097713 0.9807389601490499 0.32041108777955507 0.036507018799097506 185.7922235549391 121771.0278200237 0.005469586343714173 0.007557398793584621 1.5864164587247097e-08 7.799582793068865 -0.03922968446072139 TAVIPINGS(ph)PR ddPTM_A549_MK2206_60min_R1 3 TAVIPINGSPR 11 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR 172.86 3.5162e-15 208060000.0 16537.0 18842.3 17207.5 14681.7 22748.0 18406.9 16611.7 18823.9 25747.0 23213.0 24273.0 True False 19328.041309167565 19801.292588029613 19647.782247238316 18278.717159086555 19401.79933409339 20354.705940488668 19629.830864672345 21492.245470776 19915.345609510357 17969.167177871343 18245.34419928016 1.0593410076599223 1.0852792017379886 1.0768655297834002 1.0018291219634932 1.0633835745811173 1.1156109590572552 1.0758816413804244 1.1779577976733342 1.0915302770937083 0.9848631509281303 1.0 14.155240747238661 -10.618754207806854 1.0395042394900635 1.0027849877797126 1.082884043059901 0.41371699728072153 0.04086979422984202 0.4440784969584308 0.8966269430392615 0.023955986805241355 0.007471372767062737 2.4057239521626105e-11 10.618754207806854 0.08009905528018835 TAVIPINGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TAVIPINGSPR 11 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TAVIPINGS(1)PR;TAVIPINGS(1)PR 162.38 1.6100000000000002e-13 300170000.0 12763.0 12645.1 13587.1 12831.7 15433.8 14598.9 13317.7 15536.0 14462.1 13900.3 14992.900000000001 True False 14058.690364375989 13710.746954982318 14509.202311869656 13624.284966094896 14349.783131719503 14480.011398649865 13824.512361225068 15226.122292243768 13854.30823030748 13022.632685759958 13148.868347823738 1.0691939406863735 1.042732088594649 1.1034563529013557 1.0361564665258698 1.0913321779584573 1.1012363205420979 1.0513841948621498 1.1579796747119941 1.0536502354288535 0.990399503689253 1.0 13.682651019429272 -9.759256335151317 1.0938016149263803 1.0093275199521248 1.0790917240646185 0.46240005489740055 0.03392758746748294 0.2886984285774037 0.7073184388075904 0.00977088612763176 0.006300575321699478 1.740779103969294e-10 9.759256335151317 0.06976420411249373 TAVIPINGS(ph)PRT(ph)PR ddPTM_A549_MK2206_60min_R1 1 TAVIPINGSPRTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 T(0.001)AVIPINGS(0.999)PRT(1)PR 54.288000000000004 0.0097135 9868900.0 730.5 765.5 730.04 657.13 942.46 794.29 559.44 707.99 1056.8 1079.4 996.04 True False 853.7905409897138 804.4606802851395 833.5706495292087 818.1268794996862 803.8253824692124 878.3412405929695 661.0830064913464 808.3497506284413 817.4364873628209 835.562790324143 748.695778694476 1.1403704485665658 1.0744827247295323 1.1133636294607292 1.092736065543577 1.073634185397529 1.1731617375011254 0.8829794761820313 1.0796771848212978 1.091813939151908 1.1160244442424128 1.0 9.548235810025288 TAVIPINGS(ph)PRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 TAVIPINGSPRTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 T(0.001)AVIPINGS(0.999)PRT(1)PR;TAVIPINGS(1)PRT(1)PR 54.763999999999996 0.0092173 22851700.0 2030.21 2252.61 1952.07 2083.41 2243.57 2285.2 1946.29 2227.9 2425.5 2446.3 2666.2 True False 2236.3154246383906 2442.4453502354836 2084.5492089505024 2212.097503932586 2085.9893830963188 2266.590088855646 2020.3571310007544 2183.4627867462605 2323.5646699034564 2291.840200511831 2338.274302434327 0.9563956727874957 1.0445503967146652 0.8914904495081364 0.9460384958384133 0.8921063627670373 0.9693431119248703 0.8640376917701247 0.9337924059949272 0.9937091929225084 0.9801417216644964 1.0 11.191228466691204 -8.773795136666793 8.018721133641687 0.9970893842731986 0.9366663516094922 0.21584073386033764 0.04552614330590051 0.1431053628494959 55.663073594293536 0.007647549885705138 0.008283887051180638 1.6834679913376614e-09 8.773795136666793 -0.06042303266370641 TAVIPINGS(ph)PRTPR ddPTM_A549_MK2206_60min_R1 1 TAVIPINGSPRTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TAVIPINGS(0.556)PRT(0.444)PR 74.141 0.00026337 11310000.0 912.3 1145.6 1228.9 1166.3 1531.8 1042.4 1149.6 897.63 1845.2 1904.9 1822.8 True False 1066.2739364064555 1203.9061467467745 1403.1764988308103 1452.0435523571973 1306.4742491631891 1152.7060761108814 1358.467439336572 1024.871801376584 1427.2651461789148 1474.5817669894934 1370.1484532792758 0.778217815634842 0.8786683982055948 1.0241054503783775 1.0597709677968954 0.953527514508599 0.8413001331001952 0.9914746362594894 0.7480005534609654 1.04168649956356 1.0762204368878932 1.0 10.420116499896622 TAVIPINGSPRT(ph)PR ddPTM_A549_MK2206_60min_R1 1 TAVIPINGSPRTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TAVIPINGS(0.33)PRT(0.67)PR 77.221 0.00029089 9993500.0 1173.0 1332.7 1675.5 1501.3 1759.3 1341.0 1334.6 1454.8 1984.8 2358.2 2440.2 True False 1370.973722903402 1400.5287375780604 1913.1110943046808 1869.1185673959178 1500.509300530618 1482.903729916243 1577.0795446577847 1661.0223551381453 1535.2459690743062 1825.4809821589697 1834.2309939061286 0.7474378785759221 0.7635509062004957 1.0430044529073033 1.0190202725860027 0.8180590697222786 0.8084607308691756 0.8598042176243456 0.9055687973088259 0.8369970708023464 0.9952296020641734 1.0 10.840959620856673 -10.843787992677166 0.970711591131089 1.0039206655686166 0.8690136847676938 0.2411080469123661 0.08919851538406043 0.7719261492413155 1.2279539857049087 0.07545590939619136 0.016421423252033544 1.4328872138143585e-11 10.843787992677166 -0.13490698080092278 TAVIPINGSPRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 TAVIPINGSPRTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TAVIPINGS(0.002)PRT(0.998)PR;TAVIPINGS(0.014)PRT(0.986)PR 137.69 1.0877e-09 59791000.0 5953.200000000001 5199.8 5327.4 5706.799999999999 5679.1 6663.4 5930.6 5914.6 6563.0 6545.0 6471.4 True False 6557.564481485794 5638.005394699688 5688.949400258657 6059.296074916835 5280.219607831402 6609.135479643226 6156.292228348843 5796.628663086061 6287.17993344728 6131.747583023311 5675.458825584547 1.1554245538571755 0.9934008100427013 1.0023770015938263 1.067631051713736 0.9303599532831713 1.1645112197536758 1.0847215031490907 1.0213497870789388 1.107783551367713 1.0803968051678654 1.0 12.470521314711041 TAVPS(ph)PVEAAAASDPAAAR ddPTM_A549_MK2206_60min_R1 2 TAVPSPVEAAAASDPAAAR 19 0 Q147X3;Q147X3-2;J3KNC2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 T(0.081)AVPS(0.888)PVEAAAAS(0.03)DPAAAR;T(0.103)AVPS(0.892)PVEAAAAS(0.005)DPAAAR 59.225 0.0039246 15473200.0 1980.8 2626.7 2324.4 2008.42 3191.2 2648.8 2490.3 2559.6000000000004 2865.7 3118.0 3593.0 True False 2315.1106140895627 2760.387810457184 2654.0348717408538 2500.4829901614016 2721.7787073570785 2929.0942578688605 2942.755275034679 2922.4311384462444 2216.623525582547 2413.641634454954 2700.7589382447013 0.8572074246634606 1.0220785614621486 0.9826996531077984 0.9258445671521263 1.007782911986228 1.0845448723285762 1.0896030865114004 1.0820777438010125 0.8207409755063858 0.893690140306875 1.0 11.39914915956291 -8.753324620340441 24.996579052617914 0.9153499032266691 1.0089356612312943 0.25449474269201 0.07683950231974794 230.31930653183838 709471.6046684327 0.015586970674769092 0.017526748581762806 1.7647182607613085e-09 8.753324620340441 0.09358575800462521 TAVPS(ph)PVEAAAASDPAAAR ddPTM_A549_PD325901_60min_R1 2 TAVPSPVEAAAASDPAAAR 19 0 Q147X3;Q147X3-2;J3KNC2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 T(0.002)AVPS(0.998)PVEAAAASDPAAAR;TAVPS(1)PVEAAAASDPAAAR 118.48 4.7958999999999995e-14 23473000.0 6255.200000000001 7532.0 6138.1 6995.299999999999 6755.7 6272.5 6121.9 6515.0 6973.700000000001 7857.299999999999 7338.7 True False 6890.223299165142 8166.748073556302 6554.66837739379 7427.38379352102 6281.202937899776 6221.4188396407435 6354.87225453222 6385.053214081369 6680.619640695007 7361.188737064792 6436.086423852227 1.070561028147459 1.2688996908571983 1.01842454338433 1.154021761733191 0.9759351450940045 0.9666462551814217 0.9873814358646542 0.9920707699663994 1.0379940853398948 1.1437367760917756 1.0 12.651967983381292 -6.759203810299408 24.999975018095398 1.0076171673849874 1.1302175351565402 0.35429336805361944 0.0730496939992071 36.72522986398385 410681.8821615445 0.00807534742876167 0.016189676417667987 1.7409896516456596e-07 6.759203810299408 0.12260036777155281 TAVVVGTITDDVR ddPTM_A549_MK2206_60min_R1 1 TAVVVGTITDDVR 13 0 F8VUA6;F8VYV2;H0YHA7;J3QQ67;Q07020-2;Q07020;A0A075B7A0;G3V203 F8VUA6 RPL18 60S ribosomal protein L18 0 138.99 1.8375e-08 4280000.0 2128.0 2000.4 1950.4 1860.8 2499.9 2004.4 1723.8 2054.8 2875.3 3244.1 3312.3 False True 2487.154375395087 2102.211815600773 2226.996047945001 2316.6960835344867 2132.168021597505 2216.504277586962 2036.9921467713827 2346.0741925610832 2224.049140910598 2511.2555568746993 2489.7644951705865 0.9989516599740407 0.8443416313785693 0.8944605211716693 0.9304880393419531 0.8563733741618076 0.8902465602213907 0.8181465157538195 0.9422875927067719 0.8932769124246898 1.0086317648700507 1.0 11.28179357004063 -10.593600280143999 0.6705497388318773 1.0080234489956934 0.8920150270578486 0.4327429173488062 0.047268903773923863 0.64553875499639 0.46431799843006677 0.04225101668310417 0.008937964559182048 2.5491754061492386e-11 10.593600280143999 -0.11600842193784477 TAVVVGTITDDVR ddPTM_A549_PD325901_60min_R1 1 TAVVVGTITDDVR 13 0 F8VUA6;F8VYV2;H0YHA7;J3QQ67;Q07020-2;Q07020;A0A075B7A0;G3V203 F8VUA6 RPL18 60S ribosomal protein L18 0 127.87 5.848e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TCDSITPSKS(ph)SPVPVSDTQK ddPTM_A549_MK2206_60min_R1 1 TCDSITPSKSSPVPVSDTQK 20 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4;F5GWN9 F8WE42 NOL8 Nucleolar protein 8 1 TCDSIT(0.001)PS(0.009)KS(0.495)S(0.495)PVPVSDTQK 127.8 3.2234e-17 21576000.0 1443.2 1337.5 1392.8 1472.3 1880.0 1420.1 1225.6 1660.0 1685.7 2219.4 1751.8 True False 1686.776877147646 1405.5730370756025 1590.3199833766403 1833.0135660940578 1603.4544904209404 1570.374039413912 1448.2756555766382 1895.31008353679 1303.891641509753 1718.035998559758 1316.779712779589 1.2809863797088963 1.067432178240793 1.2077342686421217 1.392042684364229 1.2177089872050122 1.192586750975234 1.099861762389606 1.4393524331689327 0.9902124317797769 1.304725446394642 1.0 10.362798298546306 -8.808955199811525 24.99978886196293 0.9953778853761309 1.229016171918221 0.04366983109203426 0.13946717399320635 64.26317009984167 33810.882558052086 0.01712748568339395 0.018233470689672 1.552547156634519e-09 8.808955199811525 0.23363828654209018 TCDSITPSKSS(ph)PVPVSDTQK ddPTM_A549_MK2206_60min_R1 1 TCDSITPSKSSPVPVSDTQK 20 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4;F5GWN9 F8WE42 NOL8 Nucleolar protein 8 1 TCDSITPS(0.005)KS(0.047)S(0.947)PVPVSDTQK 145.55 1.6013000000000002e-21 21495000.0 1582.8 2295.9 1929.0 1718.0 2137.3 2014.3 1421.5 1742.6 2399.2 2708.6 2994.3 True False 1849.9379442553309 2412.7515034182234 2202.561206155613 2138.9100771239496 1822.9060012641899 2227.4518890158743 1679.7681498059642 1989.61888648868 1855.7850307351262 2096.7253787956024 2250.732671524104 0.8219269963334335 1.0719849291494965 0.9785974291936363 0.9503172474390605 0.8099167103793774 0.9896563537719187 0.7463205964253827 0.8839872063266365 0.8245248554900413 0.9315745958296264 1.0 11.136178996998561 -6.541584157175194 24.76087949043881 0.8983571839633114 0.9682023407632913 0.11384532611546094 0.08976743037512505 391.7024846993381 518506.31117542076 0.013788241372381578 0.028706021009412223 2.873530709589167e-07 6.541584157175194 0.06984515679997982 TCDSITPSKSS(ph)PVPVSDTQK ddPTM_A549_PD325901_60min_R1 2 TCDSITPSKSSPVPVSDTQK 20 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4;F5GWN9 F8WE42 NOL8 Nucleolar protein 8 1 TCDSITPSKS(0.081)S(0.919)PVPVSDTQK;TCDSITPSKS(0.031)S(0.965)PVPVS(0.003)DTQK 222.57 1.8745999999999995e-75 69590000.0 13262.2 14337.900000000001 14887.6 12060.0 14509.8 14843.8 14119.400000000001 14473.6 11919.900000000001 14673.4 15769.7 True False 14608.568780884378 15546.20515186442 15897.962062411443 12804.918809752764 13490.681704092562 14722.917014246208 14656.721493432147 14184.912693680451 11418.948055568837 13746.919019821895 13830.126872364654 1.05628595570408 1.1240826129316885 1.1495167187640727 0.9258713913420086 0.975456105977569 1.0645540095272392 1.0597676817209243 1.0256531140017762 0.8256575056000511 0.9939835799547851 1.0 13.755526770838417 -8.601820908465488 8.307836183663547 0.9177709224555103 1.0497037195987715 0.2969794471803495 0.07247196153550196 0.22293580798704246 20.913068579475897 0.014458116578382366 0.016394880245049915 2.501376650482033e-09 8.601820908465488 0.13193279714326123 TCEERPAEDGS(ph)DEEDPDS(ph)MEAPTR ddPTM_A549_PD325901_60min_R1 1 TCEERPAEDGSDEEDPDSMEAPTR 24 1 D6RGJ8;Q9H6Y2 D6RGJ8 WDR55 WD repeat-containing protein 55 2 T(0.023)CEERPAEDGS(0.977)DEEDPDS(0.859)MEAPT(0.142)R 41.89 0.04055 1399800.0 207.55 169.46 154.85 0.0 0.0 157.1 219.91 0.0 161.22 301.76 116.98 True False 228.62032320976553 183.74098891992176 165.35905218869482 0.0 0.0 155.82062968633898 228.2787953893694 0.0 154.44448405765212 282.70682210131633 102.59220159731744 2.228437636099462 1.7909839740170483 1.611809178613227 0.0 0.0 1.51883503093098 2.2251086518776724 0.0 1.5054212859556229 2.7556365659347395 1.0 6.680777260442207 -8.167690678765263 18.83176791774528 1.1505073429156254 1.2709478115623656 0.0 0.9319959799424136 61.888149352233775 12406.850909181674 0.13405512907529207 0.173065291819267 6.796875598846078e-09 8.167690678765263 0.12044046864674018 TCEERPAEDGS(ph)DEEDPDSMEAPTR ddPTM_A549_MK2206_60min_R1 7 TCEERPAEDGSDEEDPDSMEAPTR 24 1 D6RGJ8;Q9H6Y2 D6RGJ8 WDR55 WD repeat-containing protein 55 1 TCEERPAEDGS(1)DEEDPDSMEAPTR;TCEERPAEDGS(0.967)DEEDPDS(0.033)MEAPTR;TCEERPAEDGS(1)DEEDPDSMEAPTR;T(0.001)CEERPAEDGS(0.999)DEEDPDSMEAPTR;T(0.027)CEERPAEDGS(0.973)DEEDPDSMEAPTR;TCEERPAEDGS(1)DEEDPDSMEAPTR;TCEERPAEDGS(1)DEEDPDSMEAPTR 157.95 4.7438e-34 762978900.0 5124.21 5967.37 5264.84 5003.22 8206.33 6056.84 4966.91 5560.96 7800.739999999999 8239.73 7365.45 True False 5989.051373093635 6271.0836443019325 6011.473478805766 6229.009124603083 6999.189727859614 6697.770788595 5869.333254275585 6349.243109725749 6033.884845222043 6378.369270258981 5536.405488921358 1.0817580802341964 1.132699484683827 1.0858080194514372 1.1250998751929682 1.2642119046130862 1.2097688296129314 1.0601342813528443 1.1468168511917927 1.0898560189090498 1.1520776942769884 1.0 12.434733895164314 -9.631589474157547 0.6576487313809832 1.0073908226473676 1.1432616091545555 0.0 0.07002399583939917 0.4459023817498122 0.4161641806336781 0.026074964496092194 0.014011046228076925 2.335664854625972e-10 9.631589474157547 0.13587078650718798 TCEERPAEDGS(ph)DEEDPDSMEAPTR ddPTM_A549_PD325901_60min_R1 8 TCEERPAEDGSDEEDPDSMEAPTR 24 1 D6RGJ8;Q9H6Y2 D6RGJ8 WDR55 WD repeat-containing protein 55 1 TCEERPAEDGS(0.83)DEEDPDS(0.17)MEAPTR;TCEERPAEDGS(0.996)DEEDPDS(0.004)MEAPTR;TCEERPAEDGS(1)DEEDPDSMEAPTR;TCEERPAEDGS(0.997)DEEDPDS(0.003)MEAPTR;T(0.005)CEERPAEDGS(0.99)DEEDPDS(0.004)MEAPT(0.001)R;T(0.004)CEERPAEDGS(0.992)DEEDPDS(0.003)MEAPT(0.001)R;TCEERPAEDGS(1)DEEDPDSMEAPTR;TCEERPAEDGS(1)DEEDPDSMEAPTR 182.51 1.0214999999999998e-50 831071700.0 5812.379999999999 5838.610000000001 5811.64 5215.8099999999995 6175.789999999999 5844.92 5840.450000000001 5953.210000000001 4354.38 6133.6900000000005 6663.7699999999995 True False 6402.448538751995 6330.650155303576 6206.052838630333 5537.978737736028 5742.023815718882 5797.320909397053 6062.711520766874 5834.4685563471 4171.380551364345 5746.407766617915 5844.168535118448 1.0955277042882599 1.083242229799122 1.0619222907993278 0.9476076373324142 0.9825219415241427 0.9919838681174438 1.0373950518940667 0.9983402294589797 0.7137680110178068 0.9832720826045528 1.0 12.512782068086462 -8.551148731350537 24.726942087144064 0.8643727010927685 1.0251291427521199 0.2996329404496725 0.08200578863086161 163.62307706005754 143115.59262962543 0.018295426851814373 0.02074524536636525 2.8109380131842022e-09 8.551148731350537 0.16075644165935132 TCFS(ph)PNR ddPTM_A549_MK2206_60min_R1 2 TCFSPNR 7 0 O00303 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F 1 T(0.006)CFS(0.994)PNR;T(0.003)CFS(0.997)PNR 57.55 0.034901999999999996 43674000.0 5053.2 5819.8 5001.1 4166.1 6198.2 5046.1 5211.2 4705.0 6586.4 7194.7 7727.4 True False 5906.056621121456 6116.002961624366 5710.331180977105 5186.7946870233345 5286.452990705891 5580.07495266991 6158.0075851346055 5371.948158458194 5094.590916319536 5569.4122730638355 5808.473314609544 1.016800164385101 1.052945004712567 0.9831036266645848 0.8929703910281286 0.910127791653848 0.960678417620485 1.060176616400373 0.924846834528206 0.8770963797846083 0.958842706405413 1.0 12.503943303563519 -5.9679773959565985 5.302636509071184 0.9442129270765387 1.032781510606296 0.3154033603201857 0.0489992005273701 0.18433443952298523 13.669519878907348 0.00815527698999458 0.025717970428270003 1.0765212426623437e-06 5.9679773959565985 0.08856858352975738 TCFS(ph)PNR ddPTM_A549_PD325901_60min_R1 2 TCFSPNR 7 0 O00303 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F 1 TCFS(1)PNR;TCFS(1)PNR 109.71 0.008599200000000001 64746000.0 17820.9 19522.0 20593.6 16811.0 18268.1 16056.4 18532.6 17599.8 15050.0 18208.8 18025.0 True False 19630.0646489468 21167.187452464972 21991.20553537685 17849.377289448897 16985.011677523697 15925.642001882452 19237.868234427853 17248.758182224 14417.500837784797 17059.093260466758 15808.039269889274 1.2417773206280944 1.3390140985279344 1.3911406190181412 1.1291329041323872 1.0744540412343413 1.0074394255976569 1.2169673864026658 1.0911383687589242 0.9120359958395893 1.0791403645460609 1.0 13.948370815491822 -6.80357152787711 0.5241574546802122 0.9638462023067792 1.3734904236674366 0.5388014996888321 0.09567040269765635 0.5826691987308181 0.25053065531396285 0.021605431619335546 0.11086613296083922 1.5719128786258545e-07 6.80357152787711 0.40964422136065737 TCFS(ph)PNRVIGLSSDLQQVGGASAR ddPTM_A549_PD325901_60min_R1 1 TCFSPNRVIGLSSDLQQVGGASAR 24 1 O00303 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F 1 T(0.39)CFS(0.594)PNRVIGLS(0.008)S(0.008)DLQQVGGASAR 43.256 0.015309 3683400.0 1268.2 1225.4 1287.4 1402.7 1493.6 1480.9 1324.5 1400.6 1325.5 1471.7 1559.1 True False 1396.9467304005036 1328.6687585416737 1374.7707057650998 1489.341593237164 1388.694688640275 1468.8400413908303 1374.9045722942096 1372.6639342505553 1269.7938445504155 1378.7766108381074 1367.340583949201 1.0216523569905263 0.971717488779691 1.0054339949410696 1.0892250334116431 1.015617253624842 1.0742312914815086 1.0055318977830396 1.0038932145829969 0.9286595157462177 1.0083637003268613 1.0 10.41715692597797 -8.43527922593882 3.001749975879377 0.966405367340568 1.0273074564254912 0.2131915982078919 0.03668372977263716 0.23216317660702102 4.067717236192938 0.0067352590480776724 0.008120752220506355 3.6704623536680932e-09 8.43527922593882 0.06090208908492312 TCNS(ph)PQNSTDSVSDIVPDSPFPGALGSDTR ddPTM_A549_MK2206_60min_R1 2 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR 30 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.216)CNS(0.77)PQNS(0.012)T(0.001)DSVSDIVPDSPFPGALGSDTR;T(0.227)CNS(0.762)PQNS(0.006)T(0.002)DS(0.002)VS(0.002)DIVPDSPFPGALGSDTR 90.515 1.1020000000000001e-09 17692200.0 930.8 1014.3699999999999 1108.87 803.49 1677.73 688.31 780.4100000000001 876.24 1691.52 1198.23 1298.01 True False 1087.896284124881 1065.997100275423 1266.1244399532277 1000.3450860700362 1430.9381394754914 761.1465073368 922.2003952093378 1000.4497033724559 1308.3934208023838 927.5490107931234 975.6782937464524 1.1150153601834567 1.0925702735295673 1.2976863870687412 1.0252816860656675 1.4666085621121203 0.7801203657141087 0.9451890045316395 1.0253889112679602 1.3410090489749007 0.9506709503923471 1.0 9.930261722270851 TCNS(ph)PQNSTDSVSDIVPDSPFPGALGSDTR ddPTM_A549_PD325901_60min_R1 2 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR 30 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.084)CNS(0.912)PQNS(0.004)TDSVSDIVPDSPFPGALGSDTR;T(0.044)CNS(0.953)PQNS(0.003)TDSVSDIVPDSPFPGALGSDTR 126.8 1.3376e-22 45409000.0 1593.42 1656.46 1984.3000000000002 1907.6399999999999 2033.63 1665.9 2142.7 2317.0 1588.56 1569.77 2115.8 True False 1755.1828253861936 1796.0556975468753 2118.966530565239 2025.4705902352193 1890.794844442637 1652.3334627273846 2224.241621030431 2270.785617348662 1521.798347566208 1470.6544543013756 1855.570013161261 0.9458995418857618 0.96792666663491 1.1419491129603025 1.0915624718382388 1.018983294099135 0.8904721735141482 1.1986837496048337 1.2237671449971401 0.8201244559743561 0.7925620935185733 1.0 10.857646721555756 -8.780200352735104 24.999909315965613 0.9150587838262868 1.058243707581418 0.3448238879905966 0.11157479197511108 256.8007488165501 342198.06788278243 0.02042544902355266 0.02176281884762893 1.6588214680754013e-09 8.780200352735104 0.14318492375513114 TCPSLS(ph)PTSPLNNK ddPTM_A549_MK2206_60min_R1 2 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPSLS(0.77)PT(0.185)S(0.045)PLNNK;TCPS(0.009)LS(0.816)PT(0.146)S(0.028)PLNNK 136.3 4.08e-09 6412500.0 2872.3 4247.1 3871.7 3104.5 4417.1 4387.9 3768.6 3731.3 5431.5 5054.9 5186.9 True False 3357.0740190071947 4463.259249169192 4420.765278316581 3865.102639366299 3767.350441296989 4852.22466554771 4453.305838451467 4260.2232016270045 4201.2739223232065 3912.994579219483 3898.8495788425935 0.8610422000439859 1.1447631304858261 1.1338640255079866 0.9913443853644869 0.9662723234414596 1.2445272810417412 1.1422102208348004 1.0926872441413058 1.0775675843258334 1.0036279933582584 1.0 11.928832779986495 -3.645327991043475 16.645212611065165 1.0564986967267704 0.48379591835661095 0.0 0.10216175501473926 0.0 0.0 0.012832070333585186 0.0 0.00022629346320939014 3.645327991043475 -0.5727027783701595 TCPSLSPT(ph)SPLNNK ddPTM_A549_MK2206_60min_R1 1 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPSLS(0.004)PT(0.62)S(0.377)PLNNK 103.88 2.5982e-05 3627100.0 1648.1 1823.1 1860.1 1766.4 1945.5 2084.5 1527.8 1564.0 2294.3 2313.3 2380.9 True False 1926.258987823612 1915.8880029103036 2123.8901501140786 2199.168079296709 1659.319527188266 2305.0804064208855 1805.3814838364767 1785.701789549121 1774.6447132442484 1790.7239233433745 1789.6568205028686 1.07632869372261 1.0705337363908494 1.1867583358899474 1.228821109221808 0.927171907026298 1.288001353115951 1.00878641265379 0.9977900618104892 0.9916117396996804 1.000596261153692 1.0 10.80546725157876 -7.960840991484498 24.99988988227904 0.996403659471404 1.126788334040549 0.34967228267476513 0.0882195582478806 126.42687406293184 80713.16023361826 0.01249542694303747 0.01726490109899576 1.0943569705460974e-08 7.960840991484498 0.13038467456914493 TCPSLSPTS(ph)PLNNK ddPTM_A549_MK2206_60min_R1 1 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPS(0.001)LS(0.038)PT(0.153)S(0.808)PLNNK 102.62 2.7084e-05 2861200.0 2138.2 2465.1 1817.1 1676.0 2062.2 1608.2 1982.0 2033.7 3056.0 2237.6 2709.0 True False 2499.075886029029 2590.5630607065928 2074.7921035279237 2086.6200752384993 1758.8531117798207 1778.3786565632367 2342.103744576448 2321.9832029450417 2363.820879429201 1732.124605919309 2036.280535403532 1.2272748487151768 1.2722034197479661 1.01891270257453 1.0247213185804929 0.8637577589137376 0.8733465873899411 1.1501871691330148 1.1403061427805141 1.1608522687964309 0.8506316176990082 1.0 10.991720617762759 TCS(ph)LPDLSK ddPTM_A549_PD325901_60min_R1 2 TCSLPDLSK 9 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 T(0.014)CS(0.984)LPDLS(0.003)K;T(0.004)CS(0.995)LPDLS(0.001)K 89.54799999999999 0.0010011 3243000.0 3380.4 3728.2 3909.5 4002.6 4024.0 3265.1 3880.4 4262.3 3356.1 3595.3 4057.0 True False 3723.575719481047 4042.3884981190376 4174.8221797333035 4249.831511435851 3741.3681220463723 3238.510108140453 4028.0707454363564 4177.285082790337 3215.054788152129 3368.292144422262 3558.0147194419305 1.0465318479809675 1.1361359681932628 1.1733571974621055 1.194438990995077 1.0515325025505236 0.9102014363359376 1.132111883468586 1.1740494101849972 0.9036091870514817 0.9466774058063969 1.0 11.796856763682548 -8.108438340307135 0.688576149419009 0.9583636163495441 1.123500607150062 0.2584586074731886 0.08938317377238073 0.5860248986789499 0.5679531575708577 0.02302113693008201 0.03486988206020204 7.790434127071204e-09 8.108438340307135 0.1651369908005178 TDAEAT(ph)DTEATET ddPTM_A549_MK2206_60min_R1 1 TDAEATDTEATET 13 0 Q9Y3D3 Q9Y3D3 MRPS16 28S ribosomal protein S16, mitochondrial 1 TDAEAT(0.941)DT(0.059)EATET 156.71 2.3258e-18 23208000.0 1025.1 1521.7 1410.5 1889.9 1857.0 1215.6 1358.3 1198.4 1609.4 1853.6 1743.5 True False 1198.1118187112331 1599.1480302937896 1610.5301095295451 2352.925584840834 1583.8377599530259 1344.2339851500255 1605.0855278800154 1368.2768699460776 1244.8734696836907 1434.8704726188905 1310.5408318479358 0.9142117434233838 1.2202199209916271 1.2289049454938445 1.7953851781352568 1.2085375147905357 1.0257093502798997 1.2247504914568401 1.0440551234231525 0.9498929292636762 1.0948689561969946 1.0 10.35594658833745 -7.943074212275728 1.1613431728988148 0.977056713015092 1.2785512267445178 0.1872314300184047 0.20777234277662654 0.43598695150000455 1.1793943942970464 0.03734687686742038 0.05652986227266517 1.1400549582331686e-08 7.943074212275728 0.3014945137294258 TDAEAT(ph)DTEATET ddPTM_A549_PD325901_60min_R1 1 TDAEATDTEATET 13 0 Q9Y3D3 Q9Y3D3 MRPS16 28S ribosomal protein S16, mitochondrial 1 TDAEAT(0.941)DT(0.059)EATET 156.71 2.3258e-18 27111000.0 2124.6 1766.1 2049.3 2130.4 2269.9 2394.3 1919.4 1880.9 2296.9 1868.7 1717.6 True False 2340.2878279521465 1914.9354451284885 2188.3778214419917 2261.989969510554 2110.4700547298858 2374.801614627634 1992.4438173359822 1843.3839739624946 2200.3692806849112 1750.709963085663 1506.346088763485 1.5536189494628152 1.2712453395755834 1.4527722664572829 1.501640284648898 1.401052567184151 1.576531205107744 1.322699897585634 1.2237453183654985 1.4607328933891475 1.1622229288109807 1.0 10.556837557447686 -11.278204612719435 0.4608314791568117 0.7944671055388743 1.433927066780278 0.5516546008365091 0.11444053724950873 1.1762266410862519 0.2342407079733463 0.3729818920398917 0.025423441262662234 5.269815218019214e-12 11.278204612719435 0.6394599612414036 TDAGFT(ph)LR ddPTM_A549_MK2206_60min_R1 2 TDAGFTLR 8 0 P18206;P18206-2 P18206 VCL Vinculin 1 TDAGFT(1)LR;TDAGFT(1)LR 53.756 0.025830000000000002 6934300.0 1442.06 1144.31 1404.81 1229.6599999999999 1776.65 1498.88 1297.6100000000001 1359.56 1747.3 1773.84 1824.23 True False 1685.4444730179691 1202.5504912568088 1604.0331819696555 1530.9267552015347 1515.307138514024 1657.4904867239804 1533.3689404640995 1552.281793477878 1351.5393398647404 1373.128312014616 1371.223344813285 1.2291538642433708 0.8769909700017222 1.1697825799400108 1.1164678321677757 1.1050768237324304 1.2087676985616633 1.118248858775733 1.132041544763262 0.9856449315693172 1.0013892464772691 1.0 10.42124786103936 -8.764010259255352 24.82258114041711 0.993221209226986 1.1154975146826756 0.28901201998557635 0.08634508770404307 52.92388130789482 510994.6013873995 0.013829282573895875 0.015056919936391945 1.7218279000949324e-09 8.764010259255352 0.12227630545568957 TDAGFT(ph)LR ddPTM_A549_PD325901_60min_R1 2 TDAGFTLR 8 0 P18206;P18206-2 P18206 VCL Vinculin 1 TDAGFT(1)LR;TDAGFT(1)LR 90.15 0.0028003 7776800.0 2429.7 2546.2 3486.5 2316.8 2710.6000000000004 2549.6000000000004 2558.2 2718.9 2879.6000000000004 2248.15 2642.2 True False 2676.3613553493956 2760.777209889676 3723.1148560276692 2459.90347416544 2520.21680706235 2528.8369029171863 2655.553700900754 2664.6694065642114 2758.5804260787436 2106.201425328321 2317.2261502857946 1.154984961230179 1.1914146616846941 1.6067119109494252 1.0615724640696154 1.0876007103370207 1.0913207166272023 1.1460054084808389 1.1499392954095418 1.1904666386310696 0.9089321838822478 1.0 11.178183135931844 -14.999999999504995 0.09945927529916876 0.4019371986186241 1.327575632404974 0.29740122194783947 0.1401253503218349 126.07186415408646 0.9026607130875843 15.952541235809646 0.9855475416998218 1.0000000011397909e-15 14.999999999504995 0.9256384337863498 TDAGFTLR ddPTM_A549_PD325901_60min_R1 1 TDAGFTLR 8 0 P18206;P18206-2 P18206 VCL Vinculin 0 79.116 0.011508 2051200.0 860.02 1222.1 1095.4 1281.8 1166.3 1485.9 1100.0 1211.7 1286.8 1342.9 1513.8 False True 947.328597286738 1325.0906559603227 1169.7404311753066 1360.9738748209852 1084.3831115165724 1473.7993230485754 1141.8611019430962 1187.5316929397386 1232.7202709675396 1258.109064819252 1327.6121967688418 0.7135582209867893 0.9981006947550979 0.8810859330926868 1.0251290837289229 0.8167920678611998 1.1101128225814176 0.8600863299705827 0.8944868809054084 0.9285243642441284 0.9476480164021184 1.0 10.374618073286369 TDALTS(ph)SPGR ddPTM_A549_MK2206_60min_R1 1 TDALTSSPGR 10 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 TDALT(0.008)S(0.733)S(0.258)PGR 112.85 0.00012329 32060000.0 3457.5 4291.0 3212.6 4520.9 5461.2 3634.3 3469.5 4641.7 5402.7 4705.7 4771.7 True False 4041.041472240844 4509.393571657128 3668.194987504162 5628.520702950909 4657.864714407894 4018.879213746905 4099.8632400645765 5299.675189610073 4178.997076339056 3642.679101749414 3586.7551977796384 1.1266566156347746 1.2572348328786542 1.022705700621815 1.5692514243612765 1.298629111150747 1.1204776997980712 1.1430563319745308 1.4775681353694863 1.1651191246411357 1.0155917816762055 1.0 11.80846356689607 -9.772602741233957 0.960949779132009 1.024033614481937 1.247967876479835 0.2541736223702248 0.15360628385379205 0.46971732856375736 0.8963407003472396 0.049945660692884024 0.03011706407242248 1.6880964585339888e-10 9.772602741233957 0.2239342619978979 TDALTSS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 TDALTSSPGR 10 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 TDALT(0.011)S(0.308)S(0.681)PGR 115.57 8.73e-05 25684000.0 3008.4 3232.0 2800.9 3090.9 4282.4 3303.3 2702.6 3190.3 4792.1 3799.7 4187.1 True False 3516.1443716816657 3396.4949950118503 3198.1097368176574 3848.170638755775 3652.464632860975 3652.853013446925 3193.627436978967 3642.534794883988 3706.6970014112185 2941.3451309937423 3147.3275119188393 1.1171841374518945 1.0791679550823423 1.0161350303413 1.2226788042181385 1.1604971579949008 1.160620558112772 1.0147108697410077 1.157342151742967 1.177728402072572 0.9345532423476592 1.0 11.619911598422684 -10.946925672224657 1.2016780688707558 0.9998391190836208 1.1265426936321499 0.43425269240283393 0.06565173202879881 0.4324142385766554 1.1076021640791063 0.04513620186898826 0.010486599127520174 1.12998929130283e-11 10.946925672224657 0.1267035745485291 TDALTSS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 TDALTSSPGR 10 0 P49736;F8WDM3;C9J013;C9JZ21 P49736 MCM2 DNA replication licensing factor MCM2 1 TDALTS(0.007)S(0.992)PGR;TDALTS(0.018)S(0.981)PGR 115.57 8.73e-05 79016000.0 16897.300000000003 17118.4 15829.8 16000.8 18143.2 16816.5 16402.6 16709.9 15401.9 16590.8 18600.9 True False 18612.701456865198 18561.02764503002 16904.105420320317 16989.133075546597 16868.884222642093 16679.551999492807 17026.809918847117 16376.607935837053 14754.611704550009 15543.25405659635 16313.107220820157 1.1409660468062213 1.137798421464482 1.0362284261054742 1.0414406553929616 1.0340693525947409 1.0224632115581858 1.043750260962919 1.0038926192390774 0.9044636012518164 0.9528076929917279 1.0 13.993743983494745 -5.813555409091207 0.4094143925085068 0.9582805851089821 1.2269689846895269 0.7248137570994615 0.03452702975185275 1.6736485551011553 0.25091047662375926 0.011807677941551485 0.201884758510916 1.5361887874915013e-06 5.813555409091207 0.2686883995805448 TDANES(ph)SSSPEIRDQHADDVKEDFEER ddPTM_A549_MK2206_60min_R1 1 TDANESSSSPEIRDQHADDVKEDFEER 27 2 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 T(0.005)DANES(0.305)S(0.257)S(0.217)S(0.217)PEIRDQHADDVKEDFEER 91.853 1.4565e-09 4264600.0 389.4 601.37 385.71 545.88 744.26 608.22 332.35 469.87 734.84 1046.7 748.31 True False 455.12120008404446 631.9771643410506 440.40947787780254 679.6206245054843 634.7803399152599 672.5814366962392 392.7336929919184 536.4755114165251 568.3999132983489 810.2497430352788 562.483974694654 0.8091274072849957 1.1235469680431718 0.7829724893351496 1.2082488658888786 1.1285305332651516 1.1957343976979111 0.6982131236807503 0.9537614146389725 1.0105175238226234 1.4404850262180806 1.0 9.135668183957039 -6.23744161552815 24.993333957798814 1.0128396632776133 0.9270488150334111 0.06195512064489772 0.2008675555799281 1928.4467795010246 2008447.509811744 0.020443463363918276 0.054057100452058644 5.788397995713617e-07 6.23744161552815 -0.08579084824420224 TDANES(ph)SSSPEIRDQHADDVKEDFEER ddPTM_A549_PD325901_60min_R1 1 TDANESSSSPEIRDQHADDVKEDFEER 27 2 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 T(0.013)DANES(0.27)S(0.27)S(0.223)S(0.223)PEIRDQHADDVKEDFEER 77.31 1.2247e-06 4276200.0 805.31 683.05 593.54 729.95 866.29 989.7 950.21 909.46 1126.3 1060.2 960.02 True False 887.0644783621113 740.6130206641833 633.8211936459667 775.0373536632688 805.4447789382588 981.6402113339886 986.3707615248634 891.3201068424326 1078.9655278137552 993.2587910651359 841.9436260681882 1.0535912986296172 0.8796468050037851 0.7528071643060744 0.920533548407075 0.9566492981241793 1.1659215426550262 1.171540149464803 1.058645827636737 1.2815175439387088 1.1797212548583305 1.0 9.717579827918398 -7.114839981521654 3.286098918485366 1.135138868585957 0.8921599958891461 0.6002492596241011 0.09388023342781603 0.17190208618879754 3.4923077988949363 0.017746065343253344 0.03235034527234864 7.67644280526577e-08 7.114839981521654 -0.24297887269681084 TDANESSS(ph)SPEIRDQHADDVKEDFEER ddPTM_A549_MK2206_60min_R1 1 TDANESSSSPEIRDQHADDVKEDFEER 27 2 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 TDANES(0.075)S(0.075)S(0.425)S(0.425)PEIRDQHADDVKEDFEER 100.36 6.4753e-13 4596800.0 566.1 550.35 547.16 515.94 562.56 606.21 601.99 538.89 640.5 591.91 500.2 True False 661.6438401838152 578.3604642650903 624.7555155832586 642.3453231614267 479.80816921872577 670.3587398303699 711.3637907152254 615.2793077814104 495.427772668326 458.1971199006514 375.9865351822985 1.759754082318439 1.5382478098176309 1.6616433226268155 1.7084264010943453 1.2761312555676734 1.7829328369574298 1.891992728862798 1.6364397397451742 1.3176742417866532 1.2186530022371487 1.0 8.554537186854352 -9.185158184760603 1.1894257489870779 1.0856211036394288 1.6551708793138165 0.6246730135725214 0.1647616400409162 0.16895798919604527 0.49616466964589906 0.03963257818899963 0.03492577075410605 6.528927036965059e-10 9.185158184760603 0.5695497756743877 TDANESSS(ph)SPEIRDQHADDVKEDFEER ddPTM_A549_PD325901_60min_R1 1 TDANESSSSPEIRDQHADDVKEDFEER 27 2 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 T(0.042)DANES(0.195)S(0.195)S(0.284)S(0.284)PEIRDQHADDVKEDFEER 80.166 8.563e-07 5383600.0 836.99 681.79 719.22 789.78 835.79 822.16 727.88 953.71 989.53 983.71 802.84 True False 921.9606086405278 739.2468360422126 768.0305942212017 838.5629168794804 777.0869937189707 815.4646015462795 755.5798717112195 934.6875058789784 947.9434952832679 921.5983827190016 704.0957696220748 1.3094250078159004 1.0499237006338005 1.090804159544154 1.1909784905107172 1.1036666136143298 1.1581728462649081 1.0731208797302942 1.327500527919198 1.3463274971699928 1.308910552343855 1.0 9.459627864321758 TDANESSSS(ph)PEIR ddPTM_A549_MK2206_60min_R1 2 TDANESSSSPEIR 13 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 TDANES(0.004)S(0.018)S(0.168)S(0.811)PEIR;TDANES(0.001)S(0.009)S(0.088)S(0.902)PEIR 129.37 4.7371e-08 7217400.0 1470.83 1526.78 1628.4499999999998 1698.98 2524.3 1733.8600000000001 2058.42 1883.65 3074.0 2413.56 2404.6 True False 1719.070145659003 1604.4865805953548 1859.3886968191323 2115.230176270111 2152.9788139199895 1917.3359143568812 2432.4082693799473 2150.6631559361904 2377.7439081692964 1868.3351197097813 1807.4714564161452 0.9510911719002056 0.8876967737995327 1.0287236848021537 1.170270307042187 1.1911550836818836 1.0607835092226436 1.345751967891613 1.1898739248698984 1.3155084135513198 1.0336733745241635 1.0 10.819757148982585 -6.058601017609842 2.896000503026168 1.1668943036255823 0.9202777873706677 0.4681710330579729 0.10217331988743097 0.20976538860766109 3.4415736322432116 0.017767697402922743 0.058589973338899363 8.737737277473447e-07 6.058601017609842 -0.24661651625491465 TDANESSSS(ph)PEIRDQHADDVKEDFEER ddPTM_A549_MK2206_60min_R1 2 TDANESSSSPEIRDQHADDVKEDFEER 27 2 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 TDANES(0.001)S(0.006)S(0.15)S(0.843)PEIRDQHADDVKEDFEER;TDANES(0.001)S(0.005)S(0.171)S(0.823)PEIRDQHADDVKEDFEER 123.75 1.9061000000000002e-18 13691300.0 405.26 585.8599999999999 544.4300000000001 234.67 657.77 388.85 352.54999999999995 418.09000000000003 501.29999999999995 790.6500000000001 604.55 True False 473.657980344273 615.6777715896168 621.6383605325559 292.1641605347366 561.0129043426502 429.9978489022603 416.60377151888355 477.35553784692576 387.7563504116032 612.0416158697269 454.4235502688099 1.0423270978453585 1.3548544551122372 1.3679712685771495 0.6429335811533309 1.2345594853321058 0.946249041555833 0.9167741664630841 1.050463906557111 0.8532928150009603 1.346852766560359 1.0 8.827893793489718 -6.236327829566856 24.99968843873826 0.9442903025130431 1.2650313151440018 0.2172550222789984 0.197440123243432 496.2058743880616 493994.8839286666 0.019969140516943255 0.052809919445674855 5.803261897419518e-07 6.236327829566856 0.32074101263095867 TDANESSSS(ph)PEIRDQHADDVKEDFEER ddPTM_A549_PD325901_60min_R1 2 TDANESSSSPEIRDQHADDVKEDFEER 27 2 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 TDANESS(0.031)S(0.141)S(0.828)PEIRDQHADDVKEDFEER;TDANES(0.002)S(0.015)S(0.128)S(0.855)PEIRDQHADDVKEDFEER 143.64 3.9023e-33 12195800.0 485.90000000000003 591.74 443.06 489.58000000000004 547.1800000000001 548.56 482.39 360.51 624.04 506.26 740.36 True False 535.228210299326 641.608006511711 473.12871593621674 519.8202446831474 508.7479644685225 544.0927092344882 500.74761542393657 353.3193452353763 597.8137689575562 474.29465720112773 649.3004135287224 0.824315215495623 0.9881527766550989 0.7286745951152662 0.8005851126108249 0.7835324818348011 0.8379676000474621 0.7712109910766067 0.5441538891300073 0.9207044328042945 0.7304702835833738 1.0 9.34274231796878 -8.97967652184403 23.461169774779194 0.9650170412143283 0.7878362388743292 0.020406833773113364 0.12193337078369507 51.443470596808176 59387.057929372226 0.01792061759939694 0.018310804045110582 1.0479087776044606e-09 8.97967652184403 -0.1771808023399991 TDASSAS(ph)SFLDSDELER ddPTM_A549_PD325901_60min_R1 1 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;A0A0U1RQW2;A0A0U1RQH7;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 TDAS(0.027)S(0.049)AS(0.462)S(0.462)FLDS(0.001)DELER 89.541 6.5401e-06 1650200.0 279.08 466.08 532.29 631.49 572.6 568.79 304.15 406.15 492.11 630.06 753.52 True False 307.41199615216243 505.3581973079024 568.4144003197958 670.4957030821531 532.382551362762 564.1579628217235 315.7245946872663 398.049019631489 471.4283280586233 590.2779040732877 660.8418169568358 0.4651824207611269 0.7647188545589736 0.8601368523216849 1.0146084673784315 0.8056126862769878 0.8536959198793749 0.4777612230127508 0.6023363071430577 0.7133754492558324 0.8932211747608624 1.0 9.368161170732218 -10.619634003135868 0.986980544221112 0.9941969958361843 0.7382775837781873 0.2062037488022559 0.15981774321708972 0.5877202565442307 1.0538100966428592 0.09984973802163448 0.02966128767752026 2.4008553609667384e-11 10.619634003135868 -0.25591941205799695 TDASSASS(ph)FLDSDELER ddPTM_A549_MK2206_60min_R1 2 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;A0A0U1RQW2;A0A0U1RQH7;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 TDASSAS(0.016)S(0.984)FLDSDELER;TDASSAS(0.013)S(0.987)FLDSDELER 182.1 3.768199999999999e-39 5348100.0 2666.0 2572.6000000000004 2615.3 2143.4700000000003 4244.5 3234.8 2781.8999999999996 3141.7 4874.200000000001 4966.5 4419.4 True False 3115.955622557943 2703.534351536968 2986.188865971371 2668.6202462240267 3620.1396726551493 3577.1043889135453 3287.3352205031397 3587.0455960527306 3770.2014824979774 3844.5642006159483 3321.941010764996 0.9379924605706297 0.8138417698496044 0.8989289262796674 0.8033316177428091 1.089766392878085 1.0768115319693137 0.9895826596108378 1.0798041218759284 1.1349393232090397 1.1573246448860328 1.0 11.697810739590187 -6.7671246895479085 24.999998548737338 1.0631346288995691 0.8625039219709691 0.7513107154680486 0.05838152653826959 54.730482255925956 240667.46504340664 0.008701802898381822 0.016772242317150476 1.709524425982542e-07 6.7671246895479085 -0.20063070692859997 TDASSASS(ph)FLDSDELER ddPTM_A549_PD325901_60min_R1 1 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;A0A0U1RQW2;A0A0U1RQH7;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 TDAS(0.002)S(0.023)AS(0.193)S(0.781)FLDS(0.001)DELER 106.52 1.0453e-08 1546400.0 520.36 637.92 654.22 632.24 554.88 530.94 691.36 496.35 514.89 624.28 767.22 True False 573.1865641312143 691.679757180435 698.6193033444491 671.2920288787794 515.9071430320806 526.6162006725962 717.6700831267086 486.44990987095775 493.2509638782069 584.8628542597087 672.8568038082913 0.8518700574729199 1.027974679405199 1.0382882351643694 0.9976744309923666 0.7667413632619989 0.7826571681998453 1.0666015102541573 0.7229620137861545 0.7330697424570337 0.8692233636480347 1.0 9.39415569547661 -6.733402508099837 24.8752831527917 0.8612377272435277 0.9866918775905519 0.23676896286401605 0.11070382658775242 287.8080207675497 255351.7290128799 0.018538789793363247 0.038585162416292694 1.847555493892919e-07 6.733402508099837 0.12545415034702423 TDASSASSFLDS(ph)DELER ddPTM_A549_MK2206_60min_R1 2 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;A0A0U1RQW2;A0A0U1RQH7;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 TDASSAS(0.002)S(0.002)FLDS(0.995)DELER;TDASSASSFLDS(1)DELER 167.71 1.0465e-29 3267400.0 1784.79 2064.54 2018.18 1611.4 3231.1 2335.1 1931.92 2382.67 3037.1 2624.2 2576.3 True False 2086.018918073966 2169.6162676366826 2304.388271145223 2006.1930723384949 2755.809470212289 2582.1987320860694 2282.92485682247 2720.420769120845 2349.2016992521053 2031.391397413948 1936.533607737217 1.0771922107313274 1.120360761604244 1.1899552178894708 1.0359712138859665 1.4230630747650035 1.33341281647226 1.1788717984037473 1.4047888238302135 1.213096271536996 1.0489832912260013 1.0 10.919260823619409 -10.409059192528172 0.9403563085164373 1.0098349675399276 1.221093073901711 0.2785937895165185 0.11973077481863091 0.4997570868092416 0.8439224274062759 0.06339841817659078 0.022687104980486057 3.898888428303779e-11 10.409059192528172 0.21125810636178333 TDASSASSFLDS(ph)DELER ddPTM_A549_PD325901_60min_R1 2 TDASSASSFLDSDELER 17 0 G3XAC6;Q14498-2;Q14498;H0Y4X3;A0A0U1RQW2;A0A0U1RQH7;Q14498-3 G3XAC6;Q14498-3 RBM39 RNA-binding protein 39 1 TDASSASSFLDS(1)DELER;TDASSASSFLDS(1)DELER 250.41 5.762699999999999e-86 10991300.0 5295.7 4588.6 4578.2 4846.799999999999 5538.0 4553.4 4615.9 5291.1 4684.5 4979.6 5412.4 True False 5833.315565511706 4975.297425693104 4888.904182953068 5146.175828118545 5149.029985062826 4516.318620074958 4791.560600417396 5185.564859712349 4487.626755787564 4665.187206176149 4746.709112030439 1.2289178518918054 1.0481572197216198 1.0299565588635373 1.0841565612427493 1.0847578529749617 0.9514631112802844 1.009448965025744 1.0924547380773004 0.9454185310015657 0.9828255947583401 1.0 12.212711925857752 -2.000000000000001 0.362493991508383 0.9817322296316084 3.5647853482829848 0.543201428207995 0.05200262902283018 29.88262553019899 0.36343740634852983 0.013471615332366429 54.171239269450105 0.00999999999999998 2.000000000000001 2.5830531186513763 TDATDGKDYNASAST(ph)ISPPSSMEEDK ddPTM_A549_MK2206_60min_R1 1 TDATDGKDYNASASTISPPSSMEEDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNAS(0.004)AS(0.11)T(0.586)IS(0.298)PPS(0.001)SMEEDK 81.242 1.3040000000000001e-06 5932700.0 796.95 783.78 790.28 719.91 1192.6 794.6 1000.5 991.13 1299.1 1150.8 1140.8 True False 931.4556764431934 823.6710542049468 902.3535873513001 896.2879823179879 1017.1701198276664 878.6840445872084 1182.2778993182324 1131.6257127083252 1004.8559242364123 890.8334807346891 857.5078755217238 1.0862357105192513 0.9605405124749553 1.0522977258981923 1.0452241989878748 1.186193327039476 1.0246950140867226 1.3787370741043194 1.3196680112352588 1.1718328809808765 1.0388633226169375 1.0 9.74400611111727 -6.62020450250664 7.313752534888699 1.1257826388488323 1.029553924188025 0.17156823685993905 0.11656239926021297 0.42769722796882625 27.941181674785895 0.019153569643270207 0.04002003863774956 2.397703611871338e-07 6.62020450250664 -0.0962287146608074 TDATDGKDYNASAST(ph)ISPPSSMEEDKFSR ddPTM_A549_PD325901_60min_R1 1 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNAS(0.006)AS(0.088)T(0.452)IS(0.452)PPS(0.002)SMEEDKFSR 91.354 4.644e-09 7656500.0 1429.4 1168.3 1474.4 1421.4 1677.8 1331.4 1386.9 1408.0 1679.5 1966.9 1500.1 True False 1574.5116357313366 1266.7567411492068 1574.4616502874496 1509.1966497663823 1559.957116095777 1320.5575198242634 1439.6792384407997 1379.9163354453672 1608.916455618575 1842.7095983267457 1315.5972099173873 1.1968037206693436 0.9628758191336941 1.1967657261802171 1.1471570769454216 1.185740669208119 1.0037703864598402 1.0943161231933627 1.0488896791838125 1.222955205050645 1.4006639603944266 1.0 10.361502138323065 TDATDGKDYNASASTIS(ph)PPSSMEEDK ddPTM_A549_PD325901_60min_R1 2 TDATDGKDYNASASTISPPSSMEEDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNASAS(0.004)T(0.023)IS(0.959)PPS(0.007)S(0.007)MEEDK;TDATDGKDYNAS(0.001)AS(0.022)T(0.189)IS(0.541)PPS(0.124)S(0.124)MEEDK 107.52 8.870299999999999e-13 20677100.0 3785.2 3680.3999999999996 3910.9 3663.3 4096.6 3609.0 4303.5 3320.3 4232.200000000001 4227.1 4577.9 True False 4169.4707174830355 3990.5602243649246 4176.317192152188 3889.5737210420616 3808.8689485027767 3579.609500560134 4467.272047465557 3254.0740117750383 4054.335351871949 3960.2001845986006 4014.847321699091 1.0385128956083212 0.993950679717532 1.0402181845322982 0.9687974185269856 0.9486958390464661 0.8915929333634627 1.1126879030545547 0.8105100271653438 1.0098354998356815 0.9863887384197306 1.0 11.971129410034628 -6.264527915033818 24.793050742763093 0.9845960369989378 1.021199595257148 0.07220687519437818 0.07335031170381826 603.8406868438733 4847299.029514551 0.009692527195310873 0.023520938345598354 5.43841174258783e-07 6.264527915033818 0.036603558258210156 TDATDGKDYNASASTIS(ph)PPSSMEEDKFSR ddPTM_A549_MK2206_60min_R1 4 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNAS(0.001)AS(0.014)T(0.058)IS(0.922)PPS(0.003)S(0.003)MEEDKFSR;TDATDGKDYNAS(0.001)AS(0.144)T(0.144)IS(0.661)PPS(0.025)S(0.025)MEEDKFSR;TDATDGKDYNASAS(0.002)T(0.008)IS(0.936)PPS(0.046)S(0.008)MEEDKFSR;TDATDGKDYNASAST(0.001)IS(0.973)PPS(0.023)S(0.002)MEEDKFSR 152.05 5.668e-37 481260000.0 22549.1 26291.5 24470.8 22288.4 33787.9 27236.5 25604.4 27855.1 40658.7 37430.5 37374.600000000006 True False 26354.836807434855 27629.625049923885 27941.12740466189 27749.059000564295 28817.744668560495 30118.648351874537 30256.388051278125 31803.645727666033 31449.56936860213 28974.924053388746 28093.455333515267 0.9381130407263839 0.9834897388703184 0.9945778144039245 0.9877410475549403 1.0257814258319857 1.0720877156019761 1.0769906261826931 1.1320660043453088 1.1194624867338068 1.0313763013274446 1.0 14.777946458123829 -6.882975427446377 1.8368420046750402 1.0668430811505374 0.973608753818458 0.5999591908117925 0.0366207328184481 0.2687559177125762 1.8325911883019514 0.007691405972569518 0.01712384715329285 1.3092559991262217e-07 6.882975427446377 -0.09323432733207937 TDATDGKDYNASASTIS(ph)PPSSMEEDKFSR ddPTM_A549_PD325901_60min_R1 3 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDY(0.002)NAS(0.008)AS(0.06)T(0.198)IS(0.702)PPS(0.014)S(0.014)MEEDKFS(0.001)R;TDATDGKDYNASAS(0.001)T(0.013)IS(0.983)PPS(0.001)S(0.001)MEEDKFSR;TDATDGKDYNAS(0.001)AS(0.071)T(0.071)IS(0.853)PPS(0.003)S(0.001)MEEDKFSR 176.89 3.7603e-58 302302500.0 20686.18 21399.81 23862.07 22393.22 23055.510000000002 24738.09 24179.48 24527.35 27124.93 25230.8 25178.05 True False 22786.22576523915 23203.247091339734 25481.493564483622 23776.398340707437 21436.1705147916 24536.631196927592 25099.643342919164 24038.132762916164 25984.963521584985 23637.722982084746 22081.309466809194 1.0319236637432905 1.0508093791365474 1.153984712853434 1.076765776796261 0.970783483063479 1.111194570856816 1.1366917972254715 1.0886189878842243 1.176785442033836 1.0704855623537646 1.0 14.430538108968754 TDATDGKDYNASASTISPPS(ph)SMEEDKFSR ddPTM_A549_PD325901_60min_R1 1 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNASAS(0.019)T(0.019)IS(0.402)PPS(0.534)S(0.025)MEEDKFSR 133.23 9.449399999999999e-28 216690000.0 8759.6 8895.4 9242.7 9774.2 10411.0 11616.0 9889.8 11392.0 10767.0 11578.0 12281.0 True False 9648.8681435233 9645.046576409015 9869.965202870191 10377.930135181214 9679.767276000202 11521.403147272526 10266.161750906207 11164.777623148892 10314.500433251093 10846.963104086162 10770.514855673244 0.8958595083726076 0.8955046908763696 0.9163875019095583 0.963550050693701 0.8987283714577021 1.0697170285414686 0.9531727952168066 1.0366057493777072 0.9576608520082073 1.00709791959227 1.0 13.394799595260073 -6.551256455485756 1.1587629011834166 0.9862209706986804 0.8961435492783103 0.4912485294438208 0.04058410914201526 0.34699542171414677 0.879131425105957 0.005921989242335759 0.02132070671482368 2.810240863375124e-07 6.551256455485756 -0.09007742142037012 TDATDGKDYNASASTISPPSS(ph)MEEDKFSR ddPTM_A549_PD325901_60min_R1 1 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNASAS(0.002)T(0.005)IS(0.262)PPS(0.315)S(0.417)MEEDKFSR 131.99 1.1043e-27 225270000.0 13295.0 13039.0 13483.0 12961.0 15877.0 14283.0 14340.0 13994.0 17479.0 16363.0 16462.0 True False 14644.698612738288 14137.842290374476 14398.037459865502 13761.571533433294 14761.8542926765 14166.683983513558 14885.716547149097 13714.878691919366 16744.41841485983 15329.837387472959 14437.278361215924 1.014366991224577 0.9792595208494526 0.9972819737648172 0.9531970769783149 1.0224817949297502 0.9812572445489943 1.0310611304093056 0.9499628911196171 1.1598043617307934 1.0618232193025239 1.0 13.817511178225049 -8.741953968706694 24.999133511529934 1.07546318796579 0.9917048229889418 0.433425461092665 0.0421299889346292 221.56284240093146 284257.642254911 0.009993700800695674 0.011324102963293593 1.8115320884873506e-09 8.741953968706694 -0.0837583649768483 TDCSSGDASRPSSDNADS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TDCSSGDASRPSSDNADSPK 20 1 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 TDCSSGDASRPSSDNADS(1)PK;TDCSSGDASRPSSDNADS(1)PK 176.44 2.9208e-35 88254000.0 5038.9 5087.7 4740.7 4056.6 6787.0 5540.3 5390.0 4266.6 7106.299999999999 7223.200000000001 6375.3 True False 5889.343130722886 5346.642198676294 5413.002545371651 5050.467182107691 5788.641290684537 6126.570868646505 6369.293230709916 4871.403615914499 5496.734396429235 5591.474103269728 4792.137060671152 1.2289596595757775 1.1157114521109883 1.1295592085201223 1.0539070811552205 1.207945686318459 1.2784631973336051 1.329113326699775 1.0165409616293917 1.1470319664979287 1.1668017906162782 1.0 12.226453456128267 -10.272585286941977 0.5891872562703577 0.992853071598245 1.1725989090013424 0.01888064972667347 0.0988504595598181 0.8505956371829424 0.5222704040048857 0.07587989190812935 0.020744560161754008 5.3384442667551814e-11 10.272585286941977 0.17974583740309746 TDCSSGDASRPSSDNADS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TDCSSGDASRPSSDNADSPK 20 1 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 TDCSSGDASRPSSDNADS(1)PK;TDCSSGDASRPS(0.001)S(0.001)DNADS(0.998)PK 201.17 1.7168999999999998e-55 132535000.0 13572.0 13881.5 14338.8 12788.2 14530.7 12928.5 14953.1 14812.6 12407.400000000001 13916.0 16214.5 True False 14949.81944882166 15051.34272212849 15311.917194208956 13578.098069890559 13510.113760193655 12823.214582430517 15522.148403150284 14517.1510727401 11885.960125895761 13037.341385080585 14220.219292184172 1.0513072366639589 1.0584465972617683 1.0767708204489372 0.9548444922613436 0.9500636721980222 0.9017592710035429 1.0915547843683175 1.0208809565067065 0.8358492848579778 0.9168171824358763 1.0 13.79565609269997 -6.308726760536276 5.356159443097151 0.9419234965416718 1.0619456848144455 0.3130959315858467 0.06467498659989962 0.18885604036770054 13.075564560555739 0.011340592281033568 0.027300618754821017 4.912168315167211e-07 6.308726760536276 0.12002218827277367 TDCSSGDASRPSSDNADS(ph)PKSGPK ddPTM_A549_MK2206_60min_R1 1 TDCSSGDASRPSSDNADSPKSGPK 24 2 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 TDCSSGDAS(0.002)RPS(0.008)S(0.008)DNADS(0.914)PKS(0.067)GPK 41.431999999999995 0.016316 7719800.0 762.25 921.38 719.45 569.68 1103.4 779.75 647.7 657.2 1001.8 1137.2 1229.9 True False 890.8991647767411 968.2743064678272 821.478828288572 709.2516255739065 941.0913216651418 862.2626274438403 765.3787060354015 750.3601125905893 774.8938995458687 880.3057301802992 924.4818864868234 0.9636740078946252 1.0473696895754463 0.8885829352593599 0.7671882336918187 1.0179662094207564 0.932698238924479 0.8279001646467742 0.8116547479822193 0.8381926253748329 0.9522152278457282 1.0 9.852501242739363 -7.563930223239772 24.995874801374036 0.9038779490764867 0.9354077391937461 0.06145523378933826 0.0857103850106855 602.2627911771559 366709.7833491947 0.01530749436579775 0.02270469567644587 2.7294162745094333e-08 7.563930223239772 0.031529790117259426 TDDEVVQREEEAIQLDGLNASQIR ddPTM_A549_PD325901_60min_R1 2 TDDEVVQREEEAIQLDGLNASQIR 24 1 P14625;Q96GW1;A0A1W2PRR1 P14625 HSP90B1 Endoplasmin 0 ; 130.23 1.5654e-22 12385100.0 3247.0 3064.5 2918.5 3209.0 3808.9 3178.7 3645.8 3646.7 3934.0 3919.6000000000004 3748.6 False True 3576.633049684938 3322.756169863687 3116.566960366198 3407.2126418322205 3541.3760039916565 3152.8137210946243 3784.5429140583087 3573.9637077191924 3768.6676608535145 3672.1157870768793 3287.5459643332556 1.0879340056345987 1.0107101789335962 0.9479919046541047 1.0364000013375432 1.0772095789419267 0.9590173811407208 1.1511756657144865 1.0871220498491265 1.146346758871198 1.116977778232104 1.0 11.682795350033437 -7.753876373029286 24.997592288886302 1.0780967474713046 1.0195500503406236 0.3034759204139378 0.05627749905480914 262.2137836682799 866678.0144004279 0.01041223130737855 0.015279728389322607 1.7624776847623586e-08 7.753876373029286 -0.05854669713068095 TDDINSGYMT(ph)DGGLNLYTR ddPTM_A549_PD325901_60min_R1 1 TDDINSGYMTDGGLNLYTR 19 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5 Q8IVL0-3 NAV3 Neuron navigator 3 1 T(0.002)DDINS(0.113)GY(0.061)MT(0.695)DGGLNLY(0.061)T(0.069)R 47.751999999999995 0.020725 3461200.0 1566.6 1456.6 1407.7 2021.8 1765.5 1811.2 1763.1 1715.0 1674.1 1866.6 1869.1 True False 1725.6400787300338 1579.3527939381438 1503.234987187767 2146.6819941590493 1641.4973706443525 1796.4501877014468 1830.1957353053385 1680.792979608527 1603.743398839569 1748.7425574440517 1639.2125492011107 1.052725029204446 0.9634826153007795 0.91704702231592 1.3095812347247218 1.0013938530694846 1.09592266639062 1.1165091044460986 1.025366100587554 0.9783620797810338 1.066818673573675 1.0 10.678787218902379 -8.52253517743184 6.3513130129561475 0.9902477030130229 1.0643162242995696 0.036258819980705015 0.09813504859542987 0.2482275554478283 45.768691878319956 0.015554380111280708 0.018096562273184832 3.002374221611811e-09 8.52253517743184 0.07406852128654673 TDDQENVSADAPS(ph)PAQENGEKGEFHK ddPTM_A549_MK2206_60min_R1 1 TDDQENVSADAPSPAQENGEKGEFHK 26 1 J3KTP5;J3KRH7;J3KS48;J3KT43;E9PH27;E7EP87;A0A088AWN8;Q9UHQ1;Q9UHQ1-2 J3KTP5 NARF Nuclear prelamin A recognition factor 1 TDDQENVSADAPS(1)PAQENGEKGEFHK 130.41 3.8353e-24 6626600.0 1743.8 1532.4 1349.3 1485.3 2019.2 1119.6 1523.3 1278.0 2309.1 2363.1 2723.4 True False 2038.1108081832494 1610.392614590395 1540.6510292720427 1849.1985666776513 1722.178354818065 1238.0753288696678 1800.0638920854208 1459.1604137108548 1786.0925368749913 1829.274068755773 2047.1046179837522 0.9956065705086626 0.7866684489122562 0.7526000458098087 0.9033239192723703 0.8412752038605062 0.6047933837837175 0.8793218852968793 0.7127923023045205 0.8724969506610568 0.8935909052647606 1.0 10.999369118332433 -9.730769409041482 0.9305229429016045 0.9810153422683711 0.8079745631265514 0.18028951755483202 0.10260838490115129 0.39421691279746973 0.709773608532341 0.031752995457114304 0.019350785353494236 1.858791128136761e-10 9.730769409041482 -0.1730407791418197 TDDQENVSADAPS(ph)PAQENGEKGEFHK ddPTM_A549_PD325901_60min_R1 1 TDDQENVSADAPSPAQENGEKGEFHK 26 1 J3KTP5;J3KRH7;J3KS48;J3KT43;E9PH27;E7EP87;A0A088AWN8;Q9UHQ1;Q9UHQ1-2 J3KTP5 NARF Nuclear prelamin A recognition factor 1 TDDQENVSADAPS(1)PAQENGEKGEFHK 112.75 2.0101e-13 10494000.0 2664.3 3107.4 3043.8 2641.8 3352.6 3073.6 2917.1 3479.1 3275.1 3513.5 3522.2 True False 2934.777774646006 3369.2715034212465 3250.37057185631 2804.977986036884 3117.124941842115 3048.5696206488333 3028.1118367983695 3409.7066211988504 3137.4589364670414 3291.657010382338 3088.9917290654075 0.9500762812122971 1.0907350355517589 1.0522432097413639 0.908056165914548 1.0091075714162625 0.9869141415834078 0.9802913385315352 1.1038251054917771 1.0156903001537974 1.0656088779422688 1.0 11.592920292742466 TDDT(ph)SGEDNDEKEAVASK ddPTM_A549_MK2206_60min_R1 2 TDDTSGEDNDEKEAVASK 18 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 T(0.001)DDT(0.97)S(0.029)GEDNDEKEAVASK;T(0.001)DDT(0.975)S(0.024)GEDNDEKEAVASK 148.28 2.2861e-17 13991800.0 6591.9 7311.1 7146.299999999999 5959.799999999999 10005.7 7520.9 7739.8 7267.5 10689.9 10178.5 10817.2 True False 7704.451563518273 7683.203761767051 8159.752798107751 7419.951267545584 8533.874784470643 8316.756646030624 9146.021474406052 8297.690380785316 8268.654718262513 7879.1697807247365 8130.9907004677325 0.9475415539554212 0.9449283666411127 1.0035373423362006 0.9125519313555178 1.049549199949243 1.0228466557651095 1.1248348216509374 1.0205017674301355 1.016930780376721 0.9690294911137323 1.0 12.989215429284014 -6.769348875637577 24.999189181300164 1.02165643530176 0.9552959473381534 0.4352159690490439 0.04157072239549485 140.35912821677405 443627.9069837721 0.005831358015618238 0.01116059243308568 1.7007916865672103e-07 6.769348875637577 -0.06636048796360672 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(ph)DVEI ddPTM_A549_MK2206_60min_R1 2 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 39 3 O15379;O15379-2 O15379 HDAC3 Histone deacetylase 3 1 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(0.999)DVEI 103.14 1.2451e-14 19743000.0 639.29 633.14 695.3299999999999 790.24 1025.63 844.8599999999999 918.5500000000001 992.75 796.88 995.5699999999999 1293.74 True False 747.1865228601159 665.3641216404092 793.9382495988507 983.8488354752214 874.7611856438454 934.2625244273204 1085.4386450962147 1133.4753526693667 616.3879523558718 770.6700455466056 972.468652592457 0.7683399571474387 0.6842010998160684 0.8164152618002948 1.0117023647522483 0.8995263583169102 0.9607122264935894 1.1161682612623003 1.1655649255610345 0.6338383769108372 0.7924883167103779 1.0 9.925507935525681 -5.9910446171514335 7.312935155402502 0.8938172751246592 0.7311612615267851 0.209279755122196 0.1459842960905723 0.232594612068251 74.00250238585711 0.025506541516109194 0.0769802829335478 1.0208346030940182e-06 5.9910446171514335 -0.16265601359787418 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(ph)DVEI ddPTM_A549_PD325901_60min_R1 3 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 39 3 O15379;O15379-2 O15379 HDAC3 Histone deacetylase 3 1 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;TDEADAEERGPEENYS(0.001)RPEAPNEFY(0.002)DGDHDNDKES(0.997)DVEI 66.842 5.4313e-05 114355000.0 750.5899999999999 1054.5900000000001 745.0699999999999 846.6999999999999 1178.24 936.36 952.59 887.1300000000001 1018.7 718.84 1158.47 True False 826.7893442448463 1143.4640003839277 795.6349306698794 898.9987360047813 1095.4844871073362 928.7345946091687 988.8413337272493 869.4354962099785 975.8875816246764 673.4523197219985 1015.9855341463864 0.8137806262561608 1.1254727178223523 0.7831163967687377 0.8848538741844436 1.0782481150459917 0.9141218682699803 0.9732828869045432 0.8557557829211252 0.9605329493638907 0.6628562091563849 1.0 9.98866414546917 -8.776174836109936 0.010014377628879986 1.9158444774592287 2.7759808816948878e-05 0.0 0.13990634378790542 1982.4503267334746 15.651163683736312 1501.7510747182887 1490.599289334699 1.674268721571835e-09 8.776174836109936 -1.9158167176504117 TDEDRTVMDGGLES(ph)DGPNMTENGLEDESRPQR ddPTM_A549_MK2206_60min_R1 2 TDEDRTVMDGGLESDGPNMTENGLEDESRPQR 32 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.003)DEDRT(0.176)VMDGGLES(0.785)DGPNMT(0.037)ENGLEDESRPQR;TDEDRT(0.007)VMDGGLES(0.962)DGPNMT(0.026)ENGLEDES(0.005)RPQR 49.793 0.0030404 6412600.0 672.9 642.7 690.53 417.49 768.05 667.84 535.53 635.02 916.0999999999999 1006.23 958.46 True False 786.4690691745086 675.4106848063476 788.4575374217915 519.7750687418381 655.0708624296828 738.5103855236866 632.8288689873993 725.0360296671881 708.6048127110904 778.9219441429149 720.4479298497123 1.0916390159363336 0.9374871615596708 1.0943990602988702 0.7214609789360694 0.9092549722036577 1.0250711466097795 0.8783825211620907 1.0063683989187573 0.9835614530239647 1.0811634149679636 1.0 9.492750353606782 TDEDRTVMDGGLES(ph)DGPNMTENGLEDESRPQR ddPTM_A549_PD325901_60min_R1 3 TDEDRTVMDGGLESDGPNMTENGLEDESRPQR 32 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.001)DEDRT(0.053)VMDGGLES(0.905)DGPNMT(0.041)ENGLEDESRPQR;TDEDRT(0.008)VMDGGLES(0.983)DGPNMT(0.009)ENGLEDESRPQR;TDEDRT(0.003)VMDGGLES(0.965)DGPNMT(0.032)ENGLEDESRPQR 69.163 0.00018663 19464900.0 1492.22 1763.4299999999998 1379.5 1656.8999999999999 1511.63 2025.3100000000002 1615.3 1970.0 1982.55 2442.5600000000004 2001.2600000000002 True False 1643.7090758856955 1912.0404348581235 1473.1211656073915 1759.2429499070763 1405.458323640397 2008.8165468493917 1676.7711254260753 1930.7068045648975 1899.230318003339 2288.336344750103 1755.117707032378 0.936523555827457 1.0894086631323872 0.8393289861442984 1.0023504080997927 0.8007772458844378 1.144548048715193 0.955361067071237 1.1000440579164417 1.0821099407712276 1.3038079073450362 1.0 10.777352072831482 -7.275604939957669 24.99884046028445 1.0444425709110843 0.940903025587598 0.27544823555598086 0.11580309265119981 801.7591254804971 1414911.496936202 0.012026840755384773 0.019279780559186582 5.3014547641278447e-08 7.275604939957669 -0.1035395453234863 TDEERPPVEHS(ph)PEK ddPTM_A549_MK2206_60min_R1 3 TDEERPPVEHSPEK 14 1 Q15170-2 Q15170-2 1 TDEERPPVEHS(1)PEK;T(0.001)DEERPPVEHS(0.999)PEK;TDEERPPVEHS(1)PEK 99.569 1.4523e-05 102341000.0 2241.22 1925.03 1463.23 1828.26 1994.43 1806.0400000000002 1990.69 2072.14 2696.05 2428.0299999999997 2180.34 True False 2619.4831434318503 2023.0058045320734 1670.7380164246138 2276.183782073711 1701.0519890054445 1997.1539540476736 2352.3726050912674 2365.8721906626056 2085.3989797071663 1879.5363366599288 1638.901403677276 1.5983164927154248 1.2343669973025622 1.019425581475435 1.3888472954910749 1.0379221014691418 1.2185931072891696 1.4353350359046275 1.4435720082698038 1.2724371185649508 1.1468269735096508 1.0 10.678513349163845 -10.424486174695117 0.8941566989773267 1.0088316896416178 1.2830879789834124 0.18380060686887068 0.1690732657121349 0.5582824750533913 0.8404356262035313 0.09133564425796448 0.030784878225616038 3.762823306265912e-11 10.424486174695117 0.2742562893417946 TDEERPPVEHS(ph)PEK ddPTM_A549_PD325901_60min_R1 4 TDEERPPVEHSPEK 14 1 Q15170-2 Q15170-2 1 TDEERPPVEHS(1)PEK;TDEERPPVEHS(1)PEK;TDEERPPVEHS(1)PEK;TDEERPPVEHS(1)PEK 160.45 1.541e-19 134292000.0 9511.619999999999 9884.76 10520.29 10189.44 11299.11 9121.05 9405.23 9250.029999999999 10557.03 10519.5 12683.93 True False 10477.232660315438 10717.783415768245 11234.260143042979 10818.81856690275 10505.499493413367 9046.771192874487 9763.151174389335 9065.530895141837 10113.354742160744 9855.296974730898 11123.887020056954 0.9418679497035914 0.9634926529228063 1.0099221722395253 0.9725753729245766 0.9444090428526825 0.813274278726733 0.877674427723498 0.8149607128152423 0.9091565496778089 0.885958025010617 1.0 13.441373376664982 -6.8638370554615875 4.938293818541518 0.9269248248693275 0.9738991226870425 0.17411470905778526 0.05857064905356528 0.4452799272111117 17.81504842744969 0.010546178338863595 0.020380999700589618 1.368242085066663e-07 6.8638370554615875 0.046974297817715005 TDENIDTPGT(ph)PK ddPTM_A549_PD325901_60min_R1 1 TDENIDTPGTPK 12 0 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 TDENIDT(0.467)PGT(0.533)PK 149.3 4.7176000000000006e-27 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TDES(ph)SPVLSPR ddPTM_A549_MK2206_60min_R1 1 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 1 TDES(0.844)S(0.156)PVLSPR 165.63 6.1444e-14 4610800.0 1309.4 1574.2 1447.0 1283.8 1926.2 1563.3 1289.0 1472.0 1902.1 2351.8 2341.7 True False 1530.3947082435748 1654.3200560481591 1652.2063583759323 1598.3310576319716 1642.8585316217109 1728.7273683654448 1523.1946149137457 1680.6605078109358 1471.2773870295446 1820.5267466039643 1760.1912623678295 0.8694479633905637 0.939852441843592 0.9386516077539013 0.9080439676094507 0.9333409196746715 0.9821247300364058 0.8653574457952523 0.9548169813944491 0.8358622261596534 1.0342778001039334 1.0 10.781516485273285 -11.150559556846051 1.5442939230843917 0.9998126636836974 0.9060433770092094 0.4345152050793253 0.04325024178893795 0.3492909853509158 1.4983920006547777 0.03297199468531224 0.007094884729942479 7.070342351008855e-12 11.150559556846051 -0.09376928667448792 TDES(ph)SPVLSPR ddPTM_A549_PD325901_60min_R1 1 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 1 T(0.001)DES(0.633)S(0.366)PVLSPR 160.67 2.1341e-13 10280000.0 2070.3 2020.2 1990.7 2361.6 2470.3 2002.1 2014.1 2123.7 2198.3 1847.9 2001.4 True False 2280.4753319256934 2190.4493438925165 2125.8008730515658 2507.4706684172575 2296.794650072354 1985.7955613941394 2090.747677657809 2081.341137489579 2105.913095794174 1731.2232786354127 1755.2404879199114 1.2992381087495444 1.2479482777248145 1.2111165892548408 1.4285624594888384 1.3085355914927783 1.1313524129946733 1.1911459951197334 1.1857868775327312 1.1997860750636142 0.9863168554680727 1.0 10.777452994371561 -12.548864598638309 0.16435483420870284 0.588148017049493 1.3350901532095922 0.7093830591014415 0.06641077162196597 10.783058415125659 0.23921593786192202 1.7376340740429224 0.12754761878559032 2.825760833970606e-13 12.548864598638309 0.7469421361600992 TDESS(ph)PVLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 2 T(0.003)DES(0.444)S(0.554)PVLS(1)PR;T(0.004)DES(0.451)S(0.545)PVLS(1)PR 76.655 0.001395 5438900.0 370.94 348.82 450.12 336.65 328.69 108.9 343.85 349.4 429.54999999999995 417.8 413.92999999999995 True False 433.5456033877134 366.57344806931724 513.9537844037139 419.12926511279255 280.3401364130101 120.42372571803048 406.3230941335074 398.9285199926229 332.2576108503972 323.4186898252981 311.1397571131724 1.3934111391300525 1.178163316287419 1.651842211269616 1.3470771752268889 0.9010103337936355 0.3870406239156 1.3059182725585068 1.2821521868306875 1.067872566120001 1.0394643642652823 1.0 8.281418942491198 -6.684747497318791 6.432829307632652 1.0161288039337948 1.4010731617865992 0.36764525227367884 0.24885025749327105 0.18969117786534426 12.650165260969466 0.03563662855632132 0.07447688545388349 2.066581335389437e-07 6.684747497318791 0.38494435785280445 TDESS(ph)PVLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 2 T(0.029)DES(0.453)S(0.535)PVLS(0.983)PR;T(0.02)DES(0.466)S(0.542)PVLS(0.973)PR 55.452 0.019594999999999998 6991600.0 477.58 293.82 328.0 407.99 524.81 229.19 388.53999999999996 306.65 634.63 563.45 650.67 True False 526.0635700241858 318.58124256137955 350.2600524242293 433.1906156874814 487.9491560962119 227.3235526277023 403.3261023172463 300.53362518772866 607.9587080852731 527.8736708410217 570.6417149369681 0.9218806761827667 0.558285933576674 0.6138002940477604 0.7591288970791957 0.855088479029455 0.3983647649257678 0.7067939334960761 0.526659052994268 1.0653947865560913 0.9250527205136582 1.0 9.156441404154815 -8.77140769991618 24.999277898154425 1.0308809037483397 0.663715611621856 0.5028487142968574 0.14471894172980648 96.0080907652038 240775.34313562632 0.02310933236312567 0.02474287126731796 1.6927479638982286e-09 8.77140769991618 -0.36716529212648374 TDESS(ph)PVLSPR ddPTM_A549_MK2206_60min_R1 1 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 1 TDES(0.241)S(0.759)PVLSPR 157.68 3.053e-13 4980000.0 1067.4 1745.1 1268.3 1393.8 1801.5 1625.5 1477.5 1765.5 2356.1 2179.7 2160.4 True False 1247.5510245755252 1833.918136075241 1448.1640112841696 1735.2810625700604 1536.5017364326202 1797.509331080426 1745.942624930224 2015.76503161699 1822.447111918569 1687.3042561326033 1623.9130559932798 0.7682375728006264 1.129320396376461 0.8917743508123889 1.0685800302951942 0.9461724140722585 1.1068999811575284 1.0751453832374687 1.2413010808537595 1.122256579681142 1.0390360801062406 1.0 10.665258677625374 -7.260837787502079 24.999284098387964 1.0788980054729576 0.9723293909872833 0.28716051265735043 0.10427408067963877 70.67711264885926 2937006.972820896 0.015324505195832725 0.025567151984645858 5.4848178904646745e-08 7.260837787502079 -0.10656861448567423 TDESS(ph)PVLSPR ddPTM_A549_PD325901_60min_R1 1 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 1 TDES(0.027)S(0.973)PVLSPR 172.17 3.8152e-15 11654000.0 2251.3 1727.3 1861.2 2172.0 2076.7 2138.8 2006.4 2135.4 1948.5 1595.0 2095.6 True False 2479.850318680536 1872.8656329598775 1987.512224304803 2306.159507030099 1930.8397562260686 2121.3823219168803 2082.754649944207 2092.8077718111076 1866.6113210912733 1494.2914277955963 1837.8544851029094 1.3493180982397954 1.019050010836417 1.081430679313827 1.2548107185433495 1.0505944686463862 1.1542711020443466 1.1332532944400027 1.1387233259078846 1.0156469602035734 0.8130629709304349 1.0 10.843806828257971 -8.771034830153898 5.222001403613981 1.0068627862430295 1.1416737406141981 0.3955566375218774 0.1047617612980115 0.13896633987468496 10.754036996776575 0.013762356835972975 0.01498330441243206 1.6942019210327345e-09 8.771034830153898 0.13481095437116863 TDESSPVLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 1 TDESS(0.001)PVLS(0.999)PR;TDES(0.001)S(0.001)PVLS(0.998)PR 105.25 0.00017883 36039000.0 3461.2 3878.26 3254.46 3130.9300000000003 4327.0 4059.7 2877.01 3123.33 5004.2 4482.2 4999.6 True False 4045.36594178453 4075.646868612205 3715.9913649482633 3898.007990552791 3690.5040319422396 4489.294759389242 3399.725476379359 3566.071592296964 3870.756690065318 3469.667906976905 3758.061338059618 1.0764502167155299 1.0845078092090334 0.9888054054133464 1.0372390549020232 0.9820233625691006 1.1945772981202 0.9046487458703171 0.9489125566370391 1.0299876297559016 0.9232600521545459 1.0 11.875772898890053 TDESSPVLS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TDESSPVLSPR 11 0 Q8NA72-3;Q8NA72 Q8NA72-3 POC5 Centrosomal protein POC5 1 TDESSPVLS(1)PR;TDESSPVLS(1)PR 186.58 9.8697e-19 30545000.0 2635.1000000000004 2576.7 2768.9 2936.0 2957.2 2976.1 3018.5 2977.7 3708.3999999999996 3455.2 3888.0 True False 2902.613412141909 2793.8475519294375 2956.8142047483198 3117.350051860208 2749.4964737861656 2951.863628322809 3133.370669286578 2918.3074375395395 3552.5488443083827 3237.0380823318787 3409.800648062661 0.8512560444819789 0.8193580330031351 0.8671516343421093 0.9142323477565723 0.8063510913309084 0.865699767521589 0.9189307507073349 0.8558586670448397 1.0418640885433659 0.9493335289765575 1.0 11.735471680082055 -8.758103318767377 24.999999999914852 1.0197691578177777 0.8629412746900768 0.6921679343597658 0.03921940645488286 24.856209870398686 186269.02703144753 0.005892307729313969 0.006547551717012104 1.7454068707874236e-09 8.758103318767377 -0.1568278831277009 TDEVPAGGS(ph)RS(ph)EAEDEDDEDYVPYVPLR ddPTM_A549_PD325901_60min_R1 2 TDEVPAGGSRSEAEDEDDEDYVPYVPLR 28 1 D6RD33;D6RGI7;A0A499FJW5;Q9UJV9 D6RD33 DDX41 Probable ATP-dependent RNA helicase DDX41 2 T(0.01)DEVPAGGS(0.989)RS(0.998)EAEDEDDEDY(0.002)VPY(0.002)VPLR;TDEVPAGGS(0.999)RS(0.996)EAEDEDDEDY(0.004)VPYVPLR 154.28 5.954199999999999e-46 65002000.0 5476.1 6565.4 6407.3 6345.7 6889.2 6628.5 6708.799999999999 7305.2 6737.5 8086.4 8907.099999999999 True False 6032.029640708252 7118.689299273307 6842.137908224891 6737.65947686966 6405.326358449774 6574.519693672174 6964.107055196224 7159.492055181463 6454.346305287383 7575.8233239663405 7811.5831667589855 0.7721904141501873 0.91129917550719 0.8758964427775124 0.8625216339679712 0.8199780021169939 0.841637290843814 0.8915103259517138 0.9165225412497178 0.8262532917466565 0.9698191982649708 1.0 12.931399252410339 -10.88029289863478 0.8600136464161684 1.0106661151561849 0.8580925813267907 0.5859105697200344 0.04107425794668257 0.3707169131277363 0.4276738823621344 0.03927071358766589 0.00714923920014425 1.3173679742696324e-11 10.88029289863478 -0.1525735338293942 TDEVPAGGSRS(ph)EAEDEDDEDYVPYVPLR ddPTM_A549_MK2206_60min_R1 2 TDEVPAGGSRSEAEDEDDEDYVPYVPLR 28 1 D6RD33;D6RGI7;A0A499FJW5;Q9UJV9 D6RD33 DDX41 Probable ATP-dependent RNA helicase DDX41 1 TDEVPAGGS(0.133)RS(0.867)EAEDEDDEDYVPYVPLR;TDEVPAGGS(0.002)RS(0.998)EAEDEDDEDYVPYVPLR 405.96 0.0 231470000.0 8293.0 11116.0 9672.9 9310.6 12194.4 10680.4 10332.1 9122.9 14247.2 13280.5 13095.9 True False 9692.65565561629 11681.756919725163 11044.662670307222 11591.697417968713 10400.619913823994 11810.592838924262 12209.308829131349 10416.099012709506 11020.231948103321 10280.425826292168 9843.826601547113 0.9846430710281849 1.1867089286080263 1.1219887465887888 1.1775600980361534 1.0565626899796643 1.1997969201395766 1.240301086491351 1.058135157629905 1.1195069147572467 1.0443525919764207 1.0 13.265003529689839 -10.365991378647323 0.638777961416173 0.994712667653517 1.1345436202440249 0.23856781560041607 0.07125859391852597 0.7462717620221822 0.5302887747405407 0.054605438721985075 0.014427947793060225 4.3053515713170356e-11 10.365991378647323 0.13983095259050793 TDEVPAGGSRS(ph)EAEDEDDEDYVPYVPLR ddPTM_A549_PD325901_60min_R1 2 TDEVPAGGSRSEAEDEDDEDYVPYVPLR 28 1 D6RD33;D6RGI7;A0A499FJW5;Q9UJV9 D6RD33 DDX41 Probable ATP-dependent RNA helicase DDX41 1 TDEVPAGGS(0.438)RS(0.562)EAEDEDDEDYVPYVPLR;TDEVPAGGS(0.011)RS(0.989)EAEDEDDEDYVPYVPLR 264.4 1.7202999999999994e-152 363300000.0 20965.0 20049.8 21433.2 20377.2 23037.2 20534.0 22389.5 24155.1 23269.4 21868.7 23603.6 True False 23093.351366382733 21739.46701077922 22887.785840301807 21635.85336402106 21419.146546025535 20366.77791202601 23241.54467450451 23673.307581190642 22291.468039518248 20487.906549864303 20700.506835548316 1.1155935238612256 1.0501900839184637 1.1056630652635686 1.0451847162923809 1.0347160442102374 0.983878224520126 1.1227524455871076 1.143610046326848 1.076856147369195 0.9897297062640552 1.0 14.337378470954267 -10.545513080748913 0.990580003836445 1.0025674537478233 1.0733341026253533 0.32336957855484916 0.044136900914004566 0.5565221378250165 1.024947470764111 0.02535822504402181 0.008225286942752095 2.847652028920121e-11 10.545513080748913 0.07076664887753004 TDGEPGPQGWS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TDGEPGPQGWSPR 13 0 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 TDGEPGPQGWS(1)PR;TDGEPGPQGWS(1)PR 115.68 1.8029e-05 16915000.0 6057.6 6683.4 4862.4 6514.2 10017.7 6590.5 5692.799999999999 6940.0 11504.099999999999 8968.6 9784.7 True False 7079.974785899104 7023.556512890528 5551.961435360836 8110.179292433547 8544.109600366946 7287.902335580163 6727.108071203235 7923.7662528586325 8898.439718272733 6942.587031036783 7354.8889460180735 0.9626215756435306 0.9549507224977302 0.7548667935178899 1.102692284269552 1.1616911775388146 0.9908922335973303 0.9146444114353735 1.0773468248148803 1.209867311876998 0.9439417891952657 1.0 12.844487842561149 -6.2894834498127725 24.60068337846612 1.083285492404829 0.8972267768313937 0.2899567311605844 0.10170665693663258 458.39644891204426 402111.55128631036 0.015428595400456192 0.03586023404258161 5.134717446214608e-07 6.2894834498127725 -0.18605871557343523 TDGEPGPQGWS(ph)PR ddPTM_A549_PD325901_60min_R1 1 TDGEPGPQGWSPR 13 0 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 TDGEPGPQGWS(1)PR 64.583 0.0028138 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TDGFAEAIHS(ph)PQVAGVPR ddPTM_A549_MK2206_60min_R1 4 TDGFAEAIHSPQVAGVPR 18 0 P12270 P12270 TPR Nucleoprotein TPR 1 TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR 176.21 1.3003999999999998e-30 395198500.0 12723.7 14416.100000000002 11824.000000000002 10486.8 14188.300000000001 12097.900000000001 10699.4 11418.3 18007.7 15372.9 17424.7 True False 14871.149495401549 15149.817913858396 13500.820996155506 13056.066470770336 12101.219865127352 13378.09174806392 12643.342484723136 13036.878992077189 13928.98470238784 11900.151213057266 13097.666092744896 1.135404536205044 1.1566807251446298 1.0307806673766045 0.9968238904794189 0.9239218483230766 1.0214103530608678 0.9653126286160693 0.9953589364519394 1.0634707438528632 0.9085703612225264 1.0 13.67702213662495 -5.805296274485766 5.260306648498649 1.0136531344796804 1.1467380452345965 0.5820409525008171 0.04780477542411497 0.0882688678346012 5.5647565166057635 0.00587586148383872 0.019871774909969477 1.565682601387158e-06 5.805296274485766 0.13308491075491613 TDGFAEAIHS(ph)PQVAGVPR ddPTM_A549_PD325901_60min_R1 4 TDGFAEAIHSPQVAGVPR 18 0 P12270 P12270 TPR Nucleoprotein TPR 1 TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR 175.51 1.4963999999999997e-30 381764100.0 9120.0 8376.6 8270.4 9351.6 10220.8 9821.3 9559.9 10223.6 10362.599999999999 11726.3 14004.3 True False 10045.855686210853 9082.525479680251 8831.679077955325 9929.227092975447 9502.926267845824 9741.318589041639 9923.707225878008 10019.68227774095 9927.095958912201 10985.899416777122 12281.859880571994 0.8179425415935452 0.7395073358594005 0.7190831978083122 0.8084465373751699 0.7737367434779145 0.7931468591699944 0.8079971048664853 0.8158114793013183 0.808273018536495 0.8944817416582905 1.0 13.58424142863717 -11.242094683559603 0.3137572941258017 1.1393877799842174 0.7618478813163228 0.6671199568008486 0.04180523842182837 0.988064502189936 0.09435618382510078 0.13548451341569745 0.011351858487894051 5.726711653524307e-12 11.242094683559603 -0.3775398986678946 TDGS(ph)FIGYK ddPTM_A549_MK2206_60min_R1 2 TDGSFIGYK 9 0 A0A5F9ZGZ4;A0A5F9ZHA9;F8VS91;A0A5K1VW74;Q9Y243-2;Q9Y243 A0A5F9ZGZ4 AKT3 RAC-gamma serine/threonine-protein kinase 1 TDGS(1)FIGYK;T(0.001)DGS(0.999)FIGYK 118.4 0.00016611 10760100.0 7123.5 7149.9 6888.799999999999 6407.700000000001 9332.5 7138.0 6083.2 7887.8 9248.1 10540.5 10168.400000000001 True False 8325.772647146108 7513.799370307921 7865.735426109277 7977.586787652585 7959.701612687996 7893.338422179078 7188.438697783784 9005.919805374395 7153.420116181024 8159.3937293048175 7643.3056464368 1.0892895080059326 0.9830562478959279 1.0291012540858118 1.0437351529140566 1.0413951738798637 1.032712649121763 0.9404881906214141 1.1782755030309204 0.9359065889921393 1.0675215812033645 1.0 12.899981007778312 TDGS(ph)FIGYK ddPTM_A549_PD325901_60min_R1 2 TDGSFIGYK 9 0 A0A5F9ZGZ4;A0A5F9ZHA9;F8VS91;A0A5K1VW74;Q9Y243-2;Q9Y243 A0A5F9ZGZ4 AKT3 RAC-gamma serine/threonine-protein kinase 1 T(0.008)DGS(0.986)FIGY(0.006)K;T(0.196)DGS(0.803)FIGY(0.001)K 94.616 0.00094307 22802000.0 10048.1 9964.7 10743.4 11329.3 12432.599999999999 11146.7 10761.1 11543.5 11691.8 10739.7 12236.9 True False 11068.175714979738 10804.460240117693 11472.511729312388 12029.08513029286 11559.37706614158 11055.92497087661 11170.619549199871 11313.255836799432 11200.43430532972 10061.593509151327 10731.838876100308 1.0313400939729396 1.0067669077830745 1.0690163970744613 1.1208782827593047 1.0771105678714754 1.0301985613572746 1.0408858796861666 1.0541768253709 1.0436640388137925 0.9375460836966524 1.0 13.38960967932798 -10.218391239772071 0.49918185507088 0.9949861315569198 1.0566071794400687 0.4226163837192759 0.034193233977912164 1.1206657061912677 0.48486127212479935 0.03162855718679735 0.008163204641323014 6.047957911976277e-11 10.218391239772071 0.061621047883148816 TDGS(ph)IS(ph)GDRQPVTVADYISR ddPTM_A549_MK2206_60min_R1 1 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 2 T(0.111)DGS(0.89)IS(0.998)GDRQPVTVADYISR 64.954 0.00050802 13446000.0 2919.5 2982.8 2349.4 2200.6 4162.9 3308.3 2347.9 3159.5 4631.1 3747.0 3725.6 True False 3412.240225077988 3134.611779431108 2682.580247663038 2739.747098788688 3550.5429245602836 3658.3821101281937 2774.4830382901328 3607.3688005629447 3582.1632443470494 2900.55009759548 2800.430698670875 1.2184697970556768 1.1193320302190803 0.9579170264546198 0.9783306189612234 1.267856021663176 1.3063640931605682 0.9907344036783138 1.2881478560690878 1.2791472561871273 1.0357514288684677 1.0 11.45143301149371 -6.751911835702878 24.998391899372038 1.157100081644252 1.0642427086312962 0.11758367706953121 0.12763799459705782 425.0962038644704 1115360.218924492 0.020714237495313245 0.042679075679999685 1.77046833717278e-07 6.751911835702878 -0.09285737301295582 TDGS(ph)IS(ph)GDRQPVTVADYISR ddPTM_A549_PD325901_60min_R1 3 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 2 T(0.233)DGS(0.768)IS(0.999)GDRQPVTVADYISR;T(0.116)DGS(0.884)IS(0.999)GDRQPVTVADYISR;T(0.492)DGS(0.518)IS(0.989)GDRQPVTVADYISR 114.34 1.2471999999999999e-14 192853000.0 16222.599999999999 17229.8 17036.4 17082.92 18770.6 16025.500000000002 17491.0 18121.6 17378.3 19027.399999999998 20038.8 True False 17869.506409553076 18681.81571398835 18192.59255219555 18138.093170273758 17452.21781105459 15894.993641237592 18156.629576442447 17760.150471879817 16647.950485666144 17826.006716763597 17574.15463641925 1.0168060301757993 1.0630278440405705 1.035190194269413 1.032089084540422 0.9930615823129285 0.9044528155168328 1.033143838328139 1.010583486904976 0.9472973710591054 1.014330821911765 1.0 14.101167673047643 -6.7978651850305525 3.9733308621054264 0.976965911690867 1.0393266638827834 0.3128849034890112 0.03504974256125005 0.16758360965480124 5.6431727194690895 0.00505501719695399 0.010203321235584524 1.5927030618861292e-07 6.7978651850305525 0.06236075219191639 TDGS(ph)ISGDR ddPTM_A549_PD325901_60min_R1 1 TDGSISGDR 9 0 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.226)DGS(0.731)IS(0.043)GDR 108.1 0.00045806 76043000.0 5760.4 6215.4 6733.6 6452.4 6237.0 5857.3 7707.2 6245.6 5856.5 7408.6 6500.5 True False 6345.191567417653 6739.193570948197 7190.582588426189 6850.950093536378 5798.934636481917 5809.600090781629 8000.501713541669 6121.026608421586 5610.371671527351 6940.819731640418 5700.979710064643 1.1130002017400102 1.182111481479344 1.2612889282401352 1.201714519601175 1.017182121564885 1.019052932345159 1.4033555845528438 1.07367977430535 0.9841065846318783 1.2174784132956888 1.0 12.476994151552951 -8.519073864830476 21.867764112816307 0.9944103880800236 1.1696964990523233 0.0618201352396498 0.12181594627080526 23.81733716098722 136887.178618737 0.016859139260894336 0.01936718748870391 3.026398654268874e-09 8.519073864830476 0.17528611097229974 TDGS(ph)ISGDRQPVTVADYISR ddPTM_A549_MK2206_60min_R1 3 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.033)DGS(0.961)IS(0.006)GDRQPVTVADYISR;TDGS(0.5)IS(0.5)GDRQPVTVADYISR;TDGS(0.999)IS(0.001)GDRQPVTVADYISR 267.56 2.9308999999999992e-111 238436100.0 7187.099999999999 9334.8 9004.2 7635.900000000001 11768.2 8088.700000000001 8258.5 8225.4 12789.7 12424.400000000001 12569.0 True False 8400.106772275387 9809.901447845481 10281.130955140678 9506.69584278858 10037.113369240273 8944.64086515549 9758.9625502445 9391.375639231035 9892.85337095408 9617.719410879448 9447.770413247326 0.8891099597950705 1.0383297877444595 1.0882071118837564 1.006236966708953 1.0623790513756124 0.9467462135419416 1.0329381561347883 0.9940308907234646 1.0471098405484827 1.0179882649766578 1.0 13.205758191427854 TDGS(ph)ISGDRQPVTVADYISR ddPTM_A549_PD325901_60min_R1 3 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TDGS(0.996)IS(0.004)GDRQPVTVADYISR;T(0.004)DGS(0.953)IS(0.043)GDRQPVTVADYISR;TDGS(0.99)IS(0.01)GDRQPVTVADYISR 289.76 9.616199999999995e-144 770360000.0 21319.800000000003 21590.8 22887.1 23225.0 26461.7 24030.600000000002 24113.0 24857.5 24684.7 25923.0 27062.6 True False 23484.17040119277 23410.332488919183 24440.35623731275 24659.555502197978 24603.121479909172 23834.902760920042 25030.6334101399 24361.69766216848 23647.287902356573 24286.21735595316 23734.07176395591 0.9894707758007769 0.9863597246078787 1.0297582513603691 1.0389938880882448 1.0366161240513756 1.0042483648809581 1.0546287067418845 1.026444088669426 0.9963434903853652 1.0232638376376602 1.0 14.534672006829984 -8.765697193039554 24.900271305417494 0.9982733132849211 1.021672161709078 0.04546710997140524 0.021141025770177013 119.3890995399231 698206.5133911811 0.0035367288455495135 0.0038283584818420637 1.7151527617431765e-09 8.765697193039554 0.02339884842415696 TDGS(ph)QKTESSTEGKEQEEK ddPTM_A549_MK2206_60min_R1 1 TDGSQKTESSTEGKEQEEK 19 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 T(0.037)DGS(0.841)QKT(0.01)ES(0.037)S(0.037)T(0.037)EGKEQEEK 45.011 0.013125999999999999 3572500.0 750.74 915.44 803.39 951.63 1085.2 472.53 567.33 502.84 991.09 741.89 1267.5 True False 877.4465581692242 962.0319858396185 917.3227824848927 1184.7793927202943 925.5685175557478 522.5328109599715 670.4065173615321 574.1191098829154 766.6096974455129 574.2965337350173 952.7447687796155 0.9209670700088526 1.0097478541623475 0.9628211169922295 1.2435433198314962 0.97147583265277 0.5484499396719766 0.703658040778608 0.6025948697869135 0.8046328067772802 0.6027810936927442 1.0 9.895945971451448 -7.012342172083902 24.945655916313356 0.8374735545462371 1.0374266437668231 0.36124766849438505 0.1655739785477425 695.0912794418833 1404902.3685721478 0.026079688655273617 0.046757930927045145 9.71981117203704e-08 7.012342172083902 0.19995308922058608 TDGS(ph)QKTESSTEGKEQEEK ddPTM_A549_PD325901_60min_R1 1 TDGSQKTESSTEGKEQEEK 19 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 T(0.001)DGS(0.656)QKT(0.084)ES(0.177)S(0.063)T(0.019)EGKEQEEK 75.539 9.2256e-05 37738000.0 6030.1 6613.6 6111.5 6563.3 7795.1 7414.8 7052.3 7350.5 6687.8 7258.2 7847.7 True False 6642.271312875004 7170.951282431219 6526.263141434995 6968.700134664202 7247.599067635108 7354.416327169103 7320.679135666634 7203.888511144301 6406.735023450976 6799.916013307834 6882.482650669074 0.9650981557111926 1.0419134557112326 0.948242585224759 1.0125270906402861 1.0530501035016107 1.0685702675115571 1.0636683748058502 1.0466991166979522 0.930875579152844 0.9880033642579231 1.0 12.748713352748418 -8.751738785635137 24.99847265997448 0.9673579112847555 1.0262426457752698 0.24975241295223627 0.03978176499647773 198.1281389908073 510576.4776828131 0.007547431224369714 0.00850601845445553 1.7711739429931708e-09 8.751738785635137 0.058884734490514345 TDGSIS(ph)GDR ddPTM_A549_MK2206_60min_R1 2 TDGSISGDR 9 0 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.004)DGS(0.352)IS(0.644)GDR;T(0.002)DGS(0.229)IS(0.769)GDR 113.46 0.00023673 112043000.0 13390.6 14443.5 13834.4 13072.8 17513.4 15247.2 14096.2 15392.7 19491.4 19100.0 18373.5 True False 15650.605911261959 15178.612456823521 15796.325946313757 16275.636586860286 14937.202059860701 16860.648583727758 16657.297075831757 17574.662363166717 15076.629021369874 14785.29673447389 13810.852867197058 1.1332106758181895 1.0990351285889886 1.143761800824952 1.1784671622646474 1.0815553683392645 1.2208260232627952 1.2061019863150848 1.2725254936941148 1.0916508318743467 1.0705563861006215 1.0 13.75351479322821 -9.367490109625662 1.5763243442618733 1.026084773506401 1.1632510426043097 0.42653191282238334 0.056713780420490814 0.19903420596926236 1.0174771564049576 0.01327934961905942 0.011282991584430593 4.2905196011177007e-10 9.367490109625662 0.13716626909790874 TDGSIS(ph)GDR ddPTM_A549_PD325901_60min_R1 1 TDGSISGDR 9 0 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.006)DGS(0.416)IS(0.578)GDR 102.55 5.0577e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TDGSIS(ph)GDRQPVTVADYISR ddPTM_A549_MK2206_60min_R1 1 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TDGS(0.068)IS(0.932)GDRQPVTVADYISR 163.74 9.458899999999999e-28 242430000.0 5134.1 5982.7 5752.6 4699.0 6134.4 5194.5 5299.4 4991.3 8280.4 7639.8 7574.6 True False 6000.610563306355 6287.193875822207 6568.405181197916 5850.255210946129 5232.03788619054 5744.178542169963 6262.232383455315 5698.832060215172 6404.902621081665 5913.963873928461 5693.617771675012 1.0539187567452442 1.1042528894546024 1.153643508328721 1.0275110563358096 0.9189302998559598 1.008880253737173 1.0998687714178998 1.0009158128889686 1.1249266947537644 1.0387005435014696 1.0 12.475129928880596 TDGSQKT(ph)ESSTEGKEQEEK ddPTM_A549_PD325901_60min_R1 1 TDGSQKTESSTEGKEQEEK 19 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 T(0.004)DGS(0.041)QKT(0.458)ES(0.458)S(0.028)T(0.011)EGKEQEEK 69.845 0.00040688 44874000.0 5004.7 5200.3 5495.5 6237.8 7038.3 6891.1 7052.0 7006.3 6243.2 6692.6 7042.8 True False 5512.773459734589 5638.54753145444 5868.457677126071 6623.094738928339 6543.954088816851 6834.9811663369255 7320.367719002469 6866.553850163979 5980.820015312824 6270.02809383374 6176.580247987577 0.8925284280942894 0.9128914876952442 0.9501143742183391 1.0722915388472842 1.0594785182219513 1.1065963513651207 1.1851813503738666 1.1117080284678897 0.9683060488466032 1.0151293826185792 1.0 12.592592575087382 -6.035007245954312 3.924639353020056 1.0266819334237387 0.9060410083280962 0.43869814034570487 0.06504804835676532 0.2239282364606606 7.415523267395787 0.011486278444844011 0.03502132404927915 9.225560347081103e-07 6.035007245954312 -0.1206409250956425 TDGSQKTESS(ph)TEGKEQEEK ddPTM_A549_MK2206_60min_R1 1 TDGSQKTESSTEGKEQEEK 19 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 T(0.008)DGS(0.047)QKT(0.309)ES(0.242)S(0.374)T(0.021)EGKEQEEK 41.763000000000005 0.016819999999999998 8969600.0 3618.9 3370.0 3870.1 2688.9 4699.6 3096.9 3671.0 2697.4 5066.0 5127.3 5052.1 True False 4229.6818463897025 3541.5186055661898 4418.938374257562 3347.6806207093086 4008.2950655224777 3424.6119024441537 4337.973181806327 3079.7647104410466 3918.5590887396406 3969.0393689354983 3797.5241391333307 1.113799857860811 0.9325861998008086 1.1636366780978646 0.8815429469457737 1.0555021952901262 0.9018012202091538 1.1423161572835552 0.8109927936215593 1.0318720685298743 1.0451650137084607 1.0 11.890843419974637 -5.232284222089874 22.391610163068375 1.0030410006473411 1.113800558256015 0.09326654181754646 0.10331474254131312 4170.140772186872 3202516.156539603 0.01187620473521517 1.3449430575399672 5.857546944960021e-06 5.232284222089874 0.11075955760867395 TDKDDSRS(ph)ITNLTGTNSK ddPTM_A549_MK2206_60min_R1 1 TDKDDSRSITNLTGTNSK 18 2 Q8IZ41 Q8IZ41 RASEF Ras and EF-hand domain-containing protein 1 T(0.001)DKDDS(0.17)RS(0.659)IT(0.17)NLTGTNSK 72.99 0.00013401 3785900.0 1184.1 1457.8 1426.5 1472.3 1573.3 1442.0 1290.7 941.68 1907.9 2024.1 2024.8 True False 1383.9471315344558 1531.9957932327568 1628.7991501197423 1833.0135660940578 1341.8696541379072 1594.5914828778684 1525.2034829085894 1075.1660237740502 1475.7636962902413 1566.8544042014976 1521.9862783628907 0.9093032908437813 1.0065766130826308 1.0701799177005353 1.2043561707177284 0.8816568672230579 1.047704243820828 1.002113819678558 0.7064229415593298 0.9696300927743131 1.0294799805205004 1.0 10.571739636784066 -6.816399665816423 24.99999387357704 0.9639092442609501 1.0462931628926495 0.14972198766633193 0.10999136485237618 151.54667811018572 68934.00160457027 0.015721798565456517 0.029711423057128455 1.526160939984675e-07 6.816399665816423 0.08238391863169936 TDKS(ph)SASAPDVDDPEAFPALA ddPTM_A549_MK2206_60min_R1 1 TDKSSASAPDVDDPEAFPALA 21 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 T(0.106)DKS(0.437)S(0.437)AS(0.02)APDVDDPEAFPALA 86.211 4.811e-06 1057700.0 1972.7 1950.8 2350.7 1545.4 3095.1 2401.4 1767.7 2364.6 2784.0 2574.4 3420.8 True False 2305.6435321155486 2050.0873874595018 2684.0646072109903 1924.0230693756432 2639.8148900541782 2655.5145540796902 2088.8682085205796 2699.7892912837915 2153.4284451344574 1992.8412520015497 2571.320950722925 0.8966766795359866 0.7972895747935012 1.0438465903901912 0.7482625103002819 1.0266376468141778 1.032743327250958 0.8123716364280764 1.0499620012526043 0.8374794459357642 0.7750262570066424 1.0 11.328293982393873 -5.728217289275515 24.99997777516282 0.9314347158736254 0.8469831814986922 0.0658988547011583 0.11146610308352033 349.4767716682356 262980.2165230573 0.013386972724970922 0.05184118627556997 1.869746421597478e-06 5.728217289275515 -0.08445153437493313 TDKS(ph)SASAPDVDDPEAFPALA ddPTM_A549_PD325901_60min_R1 1 TDKSSASAPDVDDPEAFPALA 21 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 T(0.084)DKS(0.534)S(0.376)AS(0.007)APDVDDPEAFPALA 141.64 4.666e-22 5249200.0 804.12 942.02 1114.4 834.88 1041.3 1257.6 919.71 821.3 786.23 1297.0 1230.4 True False 885.7536704381429 1021.4073314194775 1190.0298854315881 886.4486414499493 968.1626802899822 1247.3585225559514 954.7100673346233 804.918527202614 753.1874872884748 1215.1071986525953 1079.0686001482259 0.8208501946182769 0.9465638526402976 1.1028306126859035 0.8214942417267842 0.8972206958454642 1.1559585019753225 0.8847538212153332 0.7459382351520993 0.6979977799233649 1.1260703893021098 1.0 10.07557086955074 -7.989468866238533 24.996664305466606 0.8436301512737084 0.9601489948743692 0.010565714495908707 0.14661320357043972 356.9118460679139 847161.3162049194 0.022721880700609792 0.031378306566647925 1.0245452254142558e-08 7.989468866238533 0.11651884360066078 TDKT(ph)MTELEIDMNQR ddPTM_A549_MK2206_60min_R1 1 TDKTMTELEIDMNQR 15 1 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 T(0.002)DKT(0.998)MTELEIDMNQR 112.74 3.9991e-15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TDKT(ph)MTELEIDMNQR ddPTM_A549_PD325901_60min_R1 1 TDKTMTELEIDMNQR 15 1 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 T(0.044)DKT(0.954)MT(0.002)ELEIDMNQR 83.77600000000001 8.2581e-05 5310700.0 3558.7 2892.9 2969.2 3016.5 3993.3 3308.4 3397.8 3415.6 3409.7 4170.7 3392.6 True False 3919.9766042235233 3136.6948356334333 3170.707767250066 3202.822354031442 3712.8243841371245 3281.4574872965222 3527.105138347503 3347.473178513636 3266.4021665511527 3907.3612902238856 2975.3317074633214 1.3174922965364348 1.054233659986666 1.065665303568225 1.0764589191845344 1.2478690610609489 1.1028879499604414 1.1854493835091102 1.1250756243805808 1.0978279021319572 1.313252327605242 1.0 11.538834802170209 -9.85599742024217 0.6098588270001758 1.0018944520956705 1.1438100030051483 0.0 0.11943940617722787 0.6469011204301038 0.4958631057546604 0.04182706763182555 0.01767184668287021 1.3931650784772165e-10 9.85599742024217 0.14191555090947783 TDKTLVLLMGK ddPTM_A549_MK2206_60min_R1 1 TDKTLVLLMGK 11 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 66.289 0.0012323 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TDKTLVLLMGK ddPTM_A549_PD325901_60min_R1 1 TDKTLVLLMGK 11 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 119.03 7.0582e-10 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TDLEKDIIS(ph)DTSGDFR ddPTM_A549_PD325901_60min_R1 1 TDLEKDIISDTSGDFR 16 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 TDLEKDIIS(0.746)DT(0.127)S(0.127)GDFR 59.512 0.0014046 1603700.0 913.38 916.75 628.96 634.57 934.45 732.37 725.73 756.18 830.9 777.47 691.45 True False 1006.1056652051827 994.0077398344054 671.6450078437297 673.7659476869662 868.817455677493 726.4058215364998 753.3480522846944 741.0973966882657 795.9801625325836 728.3804115161394 606.4060334626873 1.6591287185256696 1.6391785123878841 1.1075829902425542 1.1110805475328827 1.4327322086760734 1.1978868636721707 1.2423162216624755 1.2221141542020393 1.312619134060052 1.2011430812403967 1.0 9.244140297510965 -2.0000000000000004 0.5044907133105503 1.1625424946642222 19.562767514286488 0.5368229387887038 0.13785732965291478 56.7944960147859 0.5336061670545519 0.029373389420068764 1117.3572813722262 0.00999999999999999 2.0000000000000004 18.400225019622265 TDLEKDIIS(ph)DTSGDFRK ddPTM_A549_PD325901_60min_R1 2 TDLEKDIISDTSGDFRK 17 2 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 TDLEKDIIS(0.937)DT(0.032)S(0.032)GDFRK;T(0.001)DLEKDIIS(0.693)DT(0.153)S(0.153)GDFRK 73.21 0.00012249 11769900.0 2577.0 2627.7 2928.1 2506.8 2761.4 3014.4 3469.1000000000004 2973.9 3674.9 2716.0 3286.2 True False 2838.6151429128663 2849.1455009139504 3126.818474095687 2661.639342644131 2567.4487903128365 2989.851725821134 3601.11849886436 2914.5832315205835 3520.4567328089943 2544.511296484541 2882.0182329381464 0.984940036281092 0.9885938500844657 1.0849405594870136 0.9235331380713214 0.8908509880228571 1.0374159648438637 1.249512739963865 1.0112993728527657 1.221524795566604 0.8828921577954331 1.0 11.492863747338605 -7.526169804014269 24.959985966376916 1.1101763221763497 0.9771955027870097 0.120571835671208 0.10766978401272416 96.25426898369462 730007.8048246339 0.01519745136542581 0.0226055298338278 2.977352092311512e-08 7.526169804014269 -0.13298081938933992 TDLEKDIISDT(ph)SGDFRK ddPTM_A549_MK2206_60min_R1 2 TDLEKDIISDTSGDFRK 17 2 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 TDLEKDIIS(0.054)DT(0.473)S(0.473)GDFRK;TDLEKDIIS(0.001)DT(0.499)S(0.499)GDFRK 75.55 0.00016347 20884800.0 2006.3400000000001 3028.4 2294.0 1594.28 3079.3999999999996 2557.8 2720.5 2104.41 4186.6 3616.0 3992.6 True False 2344.961141696515 3182.532624657761 2619.323694619479 1984.878671569948 2626.424339256514 2828.4646982697736 3214.7796352776145 2402.716561985336 3238.3417846264065 2799.143088578932 3001.127229845752 0.7813601230818322 1.0604457528517819 0.8727799570010577 0.661377715623194 0.8751459495409342 0.9424674402808132 1.0711907190428722 0.8006046988247237 1.079041818827803 0.932697241470432 1.0 11.5512887665362 -7.440351918688513 3.023017118476697 1.0190551492086692 0.852768538849716 0.17468457803160387 0.11601142228435816 0.24772758214671842 4.402511972942636 0.017539008080670635 0.028662411363536925 3.6278396354146205e-08 7.440351918688513 -0.1662866103589532 TDLEKDIISDT(ph)SGDFRK ddPTM_A549_PD325901_60min_R1 1 TDLEKDIISDTSGDFRK 17 2 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 TDLEKDIIS(0.006)DT(0.497)S(0.497)GDFRK 57.00899999999999 0.0029307 20295000.0 984.7 913.93 1298.7 1183.9 1273.7 1267.6 1130.5 1262.5 1038.1 929.24 1279.5 True False 1084.6660191021735 990.9500885376141 1386.8375917175201 1257.026814168017 1184.2397060264577 1257.2770858714405 1173.5217961333376 1237.3184470879096 994.4722670899934 870.5676278149095 1122.1296114187699 0.966613845731039 0.8830977085478581 1.2358978656343143 1.1202153489013529 1.0553501966044356 1.1204383816962074 1.0457987956040031 1.1026519882346748 0.8862365425261594 0.7758173556388047 1.0 10.132023608515722 -8.75399705343623 24.99662449756944 0.9462783660961819 1.068366361401638 0.33946366951659157 0.10249031025690136 171.35031785490946 575515.5558017198 0.01602299521335355 0.01799416715990686 1.7619880009554035e-09 8.75399705343623 0.12208799530545622 TDLEKDIISDTSGDFR ddPTM_A549_MK2206_60min_R1 2 TDLEKDIISDTSGDFR 16 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 128.9 5.3589e-10 27136000.0 2131.9 2125.95 2209.0 2094.91 2803.2 2631.8 2342.5 2283.1 2959.2 2463.7 3069.6000000000004 False True 2491.712600049242 2234.1517743333666 2522.26941648406 2608.163044044085 2390.852993376587 2910.2953291525473 2768.101928188867 2606.7364167005076 2288.945924871365 1907.1484588860376 2307.3336033498294 1.0799099863286903 0.9682829440397279 1.0931533319768683 1.1303796903306509 1.0361973621436895 1.2613240343430734 1.199697314757643 1.1297613890405789 0.9920307672666975 0.8265594780560576 1.0 11.172010894276177 -8.765261881709874 24.880181697767846 0.9962367421714258 1.1128384318361157 0.38881527006358974 0.08906110344095085 79.65566229466495 518467.21107023244 0.013312659697010941 0.014435544712813893 1.7168727922116228e-09 8.765261881709874 0.11660168966468998 TDLEKDIISDTSGDFR ddPTM_A549_PD325901_60min_R1 2 TDLEKDIISDTSGDFR 16 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 161.32 1.7839e-20 40073000.0 4470.200000000001 4389.1 3948.0 4117.0 4548.8 4315.5 4080.5 4280.799999999999 4805.7 4913.7 5396.2 False True 4924.01141321269 4758.984860547787 4215.935021252612 4371.2977396146 4229.307980508088 4280.355998799465 4235.785660435277 4195.416085777364 4603.733141271921 4603.448143422713 4732.501609330179 1.0404669284221577 1.005596036389168 0.8908470338268559 0.9236759119102121 0.8936728034428896 0.9044594914369803 0.8950415678854454 0.8865112855970413 0.9727906129383265 0.9727303915432303 1.0 12.20838728119271 -8.941748124444095 6.5726939103053645 0.9881889781291323 0.9277149921314438 0.19125496452526325 0.04768419914252677 0.2262482930727702 18.959427237732232 0.008851943308396908 0.009323612726325682 1.1435413563553165e-09 8.941748124444095 -0.060473985997688495 TDLEKDIISDTSGDFRK ddPTM_A549_MK2206_60min_R1 2 TDLEKDIISDTSGDFRK 17 2 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 147.56 6.1755e-17 61778000.0 4449.3 5003.9 4640.299999999999 3710.0 6308.4 4126.1 4344.3 3736.0 6476.4 6623.0 6609.5 False True 5200.233065058909 5258.577136615035 5298.364315668166 4618.95016654823 5380.44271668695 4562.721163316485 5133.603076469963 4265.589441020147 5009.505740685628 5126.859700126731 4968.178737079972 1.0467081279195938 1.0584516811699378 1.0664600844820367 0.9297069229966957 1.0829809073755838 0.9183890928204018 1.0332967769769126 0.8585821216905797 1.0083183407426974 1.0319394634219667 1.0 12.278501362097364 -6.223758078144868 24.948597049942315 0.9912829660698598 1.0573311600154762 0.22701073467807054 0.059623743902163094 636.4921389899953 421417.3470639515 0.007407686589213935 0.019598462346943405 5.97367955144668e-07 6.223758078144868 0.06604819394561645 TDLEKDIISDTSGDFRK ddPTM_A549_PD325901_60min_R1 2 TDLEKDIISDTSGDFRK 17 2 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 152.68 1.2713e-17 138104000.0 3963.7 3854.9 3727.6000000000004 3635.5 5125.6 4195.0 5081.5 4817.3 4252.9 4208.7 3832.0 False True 4366.091906078284 4179.765951772729 3980.577351879745 3860.056578180444 4765.59553836006 4160.837310847817 5274.879263203496 4721.2151724012565 4074.1654028581365 3942.9619637387636 3360.688293049413 1.2991659818937242 1.243723186234598 1.1844530062821919 1.1485910746806915 1.418041520904001 1.2380908159359125 1.5695830149178127 1.4048357838379983 1.2123008882687334 1.1732602431155579 1.0 11.714541022212455 -9.7835575717177 1.0019771878798358 1.033404453193215 1.3050764163829633 0.29652680292774447 0.12375997536805732 0.3081765222989462 0.6367352718026194 0.04020940242009692 0.024579665400823184 1.646047745555039e-10 9.7835575717177 0.2716719631897484 TDLET(ph)SPGAAPR ddPTM_A549_MK2206_60min_R1 2 TDLETSPGAAPR 12 0 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 TDLET(0.5)S(0.5)PGAAPR;TDLET(0.5)S(0.5)PGAAPR 66.262 0.0057455 3224700.0 1034.47 1312.58 1032.07 959.5699999999999 1588.49 1132.5 891.52 1089.44 1607.37 1640.94 1900.52 True False 1209.0632456367282 1379.3847155175283 1178.4330451202827 1194.6646930767336 1354.8252252599782 1252.340398307342 1053.4976439782015 1243.871456270072 1243.3032614424465 1270.2505143176754 1428.568432316399 0.84634604705373 0.9655713260308293 0.8249048617219366 0.836267039122239 0.9483796467930854 0.8766401174612922 0.7374498974963162 0.8707118456013732 0.8703141083878297 0.8891772249635855 1.0 10.480354431611081 -10.447349262556125 0.7969504953284998 0.9997542493187921 0.864553689713957 0.10869635338893746 0.06556711151056238 0.4842180595705797 0.5576140899972496 0.038052120604645384 0.01125638315226915 3.569856324238833e-11 10.447349262556125 -0.13520055960483512 TDLET(ph)SPGAAPR ddPTM_A549_PD325901_60min_R1 1 TDLETSPGAAPR 12 0 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 T(0.046)DLET(0.477)S(0.477)PGAAPR 48.283 0.03565 2463300.0 755.85 464.4 269.74 553.74 467.84 596.56 591.26 535.61 473.75 711.82 636.27 True False 832.5833355726397 503.5366178119418 288.04617847838915 587.9432621652146 434.9805323603813 591.7018131488378 613.7607228498867 524.9268383720836 453.83993501000316 666.8755637200386 558.0128236478473 1.4920505412937775 0.9023746345473155 0.5161999263661552 1.0536375460364973 0.7795170897988006 1.0603731456936034 1.0999043334481162 0.9407074822053844 0.8133145257185237 1.1950900328070109 1.0 9.124154466668925 -5.261042039533272 23.165269675400523 0.9085647293000784 1.492050986436037 0.43720897879656107 0.17886191550804945 6.785791178013822 395176.09077758674 0.021110497248053108 0.17121271747802097 5.482238944971579e-06 5.261042039533272 0.5834862571359586 TDLGESTASLDS(ph)IVRDEGIQK ddPTM_A549_MK2206_60min_R1 1 TDLGESTASLDSIVRDEGIQK 21 1 Q9NYQ6;A0A6I8PL36;A0A6I8PRU0 Q9NYQ6 CELSR1 Cadherin EGF LAG seven-pass G-type receptor 1 1 TDLGES(0.012)T(0.01)AS(0.046)LDS(0.932)IVRDEGIQK 69.98100000000001 0.00021362 2482700.0 1258.6 1171.7 1210.1 754.56 1756.4 1172.5 1130.0 1127.7 1626.7 1846.7 1673.2 True False 1471.0209101843323 1231.33452526466 1381.7103761373294 939.427233873485 1498.0358866890117 1296.5731717574906 1335.3063730430808 1287.5549284364085 1258.2550473061137 1429.5291874111485 1257.6982620292324 1.1696135349753243 0.9790381067061062 1.098602437366821 0.7469416649727787 1.1910932311157103 1.030909567820771 1.0617064627954813 1.0237391330723506 1.0004427017939763 1.1366233305472455 1.0 10.296570127317418 TDLGESTASLDS(ph)IVRDEGIQK ddPTM_A549_PD325901_60min_R1 2 TDLGESTASLDSIVRDEGIQK 21 1 Q9NYQ6;A0A6I8PL36;A0A6I8PRU0 Q9NYQ6 CELSR1 Cadherin EGF LAG seven-pass G-type receptor 1 1 TDLGES(0.031)T(0.031)AS(0.028)LDS(0.91)IVRDEGIQK;TDLGES(0.061)T(0.061)AS(0.4)LDS(0.478)IVRDEGIQK 94.542 4.3387e-07 10412000.0 1936.6399999999999 2285.59 2303.1 2820.7 2699.3 2578.5 2377.6 2352.0 2563.6 2726.5 2998.2 True False 2133.246267120984 2478.204690578804 2459.402215665372 2994.928232725505 2509.710480079467 2557.5015508989513 2468.0808690726417 2305.087514891693 2455.8608071591425 2554.348324692598 2629.4404071557287 0.8112928748320717 0.9424836873407156 0.9353329358491576 1.1389983300534752 0.9544656244155866 0.9726410014613741 0.938633506336951 0.8766456576154585 0.9339861061219685 0.9714418009783465 1.0 11.360540085045956 -5.214453723448065 2.2859039977809665 0.9688190898934379 0.7604566034584662 0.3507750708631726 0.06166563677707978 0.634013723792592 3.448339820255263 0.008746522664696955 0.27582733484338395 6.10304084558168e-06 5.214453723448065 -0.20836248643497168 TDLKGDDLEEGVT(ph)SEEFDKFLEER ddPTM_A549_PD325901_60min_R1 1 TDLKGDDLEEGVTSEEFDKFLEER 24 2 Q6ZVM7-2;Q6ZVM7-5;Q6ZVM7;F5H3S6;Q6ZVM7-4;Q6ZVM7-3 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 TDLKGDDLEEGVT(0.5)S(0.5)EEFDKFLEER 44.632 0.01257 1738300.0 686.13 642.4 715.08 824.4 970.78 997.66 722.76 865.94 688.56 850.71 949.58 True False 755.7854124977902 696.5373025029961 763.6096289253591 875.3213156517558 902.5957618091899 989.5353877331194 750.2650273094473 848.6681473832117 659.6222177319005 796.9960254169231 832.7876798835754 0.9075367356580608 0.8363924194944536 0.9169319472066548 1.051073805239442 1.0838245853197224 1.188220493213177 0.9009079329972018 1.0190690471091701 0.7920652930697971 0.9570218732442631 1.0 9.701804915589838 -11.530022931746023 2.696504254646534 1.001452096187572 0.9326112194233327 0.0 0.1137293457309304 1.0074957936086308 13.3108770039308 0.11495994001448893 0.018936137372350437 2.951053400155655e-12 11.530022931746023 -0.06884087676423922 TDLQGSAS(ph)PSKVEGVHTPR ddPTM_A549_MK2206_60min_R1 2 TDLQGSASPSKVEGVHTPR 19 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 TDLQGS(0.003)AS(0.994)PS(0.003)KVEGVHTPR;TDLQGS(0.001)AS(0.994)PS(0.005)KVEGVHTPR 140.66 7.04e-21 40525000.0 3008.9 3664.0 3213.8999999999996 3148.3999999999996 4294.6 3005.7 3237.0 3493.1000000000004 5276.3 4802.4 5538.5 True False 3516.7287594578365 3850.4819497906587 3669.6793470521116 3919.758141337046 3662.8700290222205 3323.7611789778157 3825.12099959332 3988.257622170099 4081.226474519734 3717.5345045883478 4163.137595176253 0.8447303695973446 0.9248990363066879 0.8814696279325713 0.9415394162995703 0.8798340062712117 0.7983788916390834 0.9188072486543356 0.9579932277019179 0.9803246664843775 0.8929646017214956 1.0 12.023455526204827 -8.316080454294573 2.3476188681009265 0.9903286936625786 0.882811782969438 0.31853149075472187 0.04680786041458321 0.13894917677930108 1.5016878127773863 0.006228187165019729 0.007824660380935156 4.8296932230390446e-09 8.316080454294573 -0.10751691069314062 TDLQGSAS(ph)PSKVEGVHTPR ddPTM_A549_PD325901_60min_R1 2 TDLQGSASPSKVEGVHTPR 19 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 TDLQGSAS(0.997)PS(0.003)KVEGVHTPR;TDLQGS(0.005)AS(0.993)PS(0.002)KVEGVHTPR 147.0 3.6952e-21 100282000.0 3020.7 3489.8999999999996 3032.8 3961.6 4360.5 3801.2 3616.3 3986.5 3912.2 4168.8 4398.7 True False 3327.3592402781924 3784.0061208051125 3238.6240457079352 4206.299034553608 4054.233522908355 3770.2442874838453 3753.9202754152907 3906.9861301512515 3747.783839041974 3905.58125654814 3857.687785656693 0.8625268360621821 0.9809000445485668 0.8395246649429472 1.0903679271798745 1.05094910427496 0.9773326658269308 0.9731011123743033 1.0127792468529608 0.9715104091566574 1.0124150718131002 1.0 11.913520671099485 -6.249820030591634 24.99746127536568 0.996695352181763 0.9029754744179603 0.5217651984867453 0.04818050491383548 529.0968231394153 1138278.0345424947 0.006431995045540411 0.01686806061393739 5.625744048447484e-07 6.249820030591634 -0.09371987776380264 TDLQGSASPSKVEGVHT(ph)PR ddPTM_A549_PD325901_60min_R1 1 TDLQGSASPSKVEGVHTPR 19 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 TDLQGSASPS(0.001)KVEGVHT(0.999)PR 142.32 8.222e-21 12714000.0 1583.3 2381.1 2174.5 2575.9 2298.7 2627.2 2582.4 2766.5 2784.4 2252.4 3299.6 True False 1744.035450436144 2581.763653471177 2322.074646330753 2735.007492706645 2137.2472420844933 2605.8049542453823 2680.6746451435015 2711.3199872227356 2667.381351011825 2110.1830796030117 2893.7701178877455 0.602686246449034 0.8921799411473942 0.8024392234811343 0.945136407277235 0.7385684263145746 0.9004878922958268 0.9263606077666635 0.9369507171501977 0.921766844755046 0.7292158649918263 1.0 11.498734602884117 -2.6551390956130954 0.1893295048361356 0.9979013268854076 2.3340142669171058e-14 0.15176178768977555 0.10561854680271111 20.867133106847973 0.2801435972878543 0.06482322777554553 5.83885781955187 0.002212386014267662 2.6551390956130954 -0.9979013268853842 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK ddPTM_A549_MK2206_60min_R1 2 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 35 0 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ; 129.68 3.2618e-29 9037300.0 1110.55 807.23 1070.91 1199.9099999999999 991.31 901.8399999999999 567.1899999999999 995.76 1100.53 1445.85 1181.77 False True 1297.9836896593113 848.3145590418982 1222.7811411529858 1493.8880038660068 845.4896121804159 997.272110207057 670.2410811737211 1136.9120293871047 851.2617121852818 1119.2314808135638 888.3038938072475 1.4611932906161051 0.9549823714112565 1.3765347080852899 1.6817307841162796 0.9518022132681072 1.1226699749482967 0.7545177791589827 1.2798683393296062 0.958300102160755 1.2599646231612998 1.0 9.79490950496057 -6.8073721626832215 24.99999871306783 0.9948658660355575 1.3396327338912724 0.3214096683394244 0.21531138564273714 87.62020725632316 47689.08646088452 0.027071293283161282 0.051160069322993294 1.5582166382160274e-07 6.8073721626832215 0.34476686785571486 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK ddPTM_A549_PD325901_60min_R1 2 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 35 0 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ; 108.11 3.3170999999999996e-14 9409200.0 1219.6100000000001 1629.8400000000001 1447.37 1386.27 1378.9 1521.94 1323.57 1433.62 1483.31 1844.62 1947.57 False True 1343.4239093705714 1767.1923367239785 1545.5972319428558 1471.896749452401 1282.0508209467553 1509.5458252375995 1373.9391806352944 1405.025324446867 1420.9716390494734 1728.1503783951803 1708.0312366634257 0.7865335718302782 1.0346370129483824 0.9048998629334915 0.861750486675932 0.7506015074122373 0.8837928679726257 0.8043993289720114 0.822599314513434 0.8319353935384037 1.0117791415636266 1.0 10.738118644027598 -10.728898343378592 0.9703409638049696 1.00046329350084 0.8554661723560464 0.3999834004281996 0.07138893001599445 0.4997006394922112 0.8318555096920693 0.05007964143485116 0.01277232309931554 1.8668166111009725e-11 10.728898343378592 -0.14499712114479357 TDNSSLS(ph)SPLNPK ddPTM_A549_PD325901_60min_R1 1 TDNSSLSSPLNPK 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 T(0.001)DNS(0.004)S(0.025)LS(0.588)S(0.382)PLNPK 83.499 0.00044916 11900000.0 2479.0 3420.4 3598.2 3800.8 3660.7 3665.6 3238.7 3189.8 3449.0 3516.9 4099.4 True False 2730.666255056656 3708.6491118948434 3842.395489734335 4035.5667837569035 3403.5850607294146 3635.748568925808 3361.950500784641 3126.176936650308 3304.0505242205827 3294.842333802091 3595.1997882376736 0.759531157069632 1.0315557772417374 1.068757152886303 1.1224874892794463 0.9467026204954839 1.0112785889732183 0.9351220234780419 0.8695419227821898 0.9190172226395772 0.9164559768226916 1.0 11.81185622931578 -7.758770752037182 24.9833492130364 0.9505873577371732 0.9995655207146326 0.07383253414176472 0.09188907469917591 172.60117056565824 1615853.916194056 0.014279156511383702 0.020648386605627903 1.7427265514024372e-08 7.758770752037182 0.04897816297745938 TDNSSLSS(ph)PLNPK ddPTM_A549_MK2206_60min_R1 2 TDNSSLSSPLNPK 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 TDNSSLS(0.071)S(0.929)PLNPK;TDNSSLS(0.068)S(0.932)PLNPK 238.03 1.7451999999999998e-56 42261000.0 13007.5 14156.3 13682.599999999999 13704.1 19165.1 14994.0 14641.5 14478.3 22835.7 20386.3 21752.4 True False 15202.847997157704 14876.795203553898 15622.998423714254 17061.60511520043 16345.939177854458 16580.65512778833 17301.671027354234 16530.64336293416 17663.450411119593 15781.02067109975 16350.678744301153 0.9297991988532273 0.9098579597950354 0.955495405911481 1.0434799302229005 0.9997101302936218 1.0140652499558975 1.0581622511166113 1.0110065533943495 1.0802885120151964 0.9651599739613286 1.0 13.99706290522464 -6.119645815577269 3.1484168524387273 1.0341847841919034 0.920660160085299 0.6021844348079778 0.03192838357160735 0.10913823540333549 2.0338564680005247 0.004476714156336619 0.013667773188858727 7.591964775472364e-07 6.119645815577269 -0.11352462410660435 TDNSSLSS(ph)PLNPK ddPTM_A549_PD325901_60min_R1 2 TDNSSLSSPLNPK 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 TDNSSLS(0.027)S(0.973)PLNPK;TDNSSLS(0.021)S(0.979)PLNPK 209.79 2.478e-37 49324000.0 13707.4 13342.5 12648.3 13278.900000000001 15281.900000000001 12885.2 13627.2 13257.4 14394.3 14625.9 16605.6 True False 15098.965157145449 14466.919300507814 13506.689698406644 14099.107494430007 14208.55206369296 12780.267203274447 14145.790553089966 12992.970756770903 13789.357628526626 13702.418177928286 14563.216471571339 1.036787799358743 0.9933876440516073 0.9274523746023328 0.9681314235734041 0.9756465607326023 0.8775717389233784 0.9713369694602684 0.8921772729351588 0.9468620929617195 0.9408922956461298 1.0 13.830041407826656 -3.2757416570879516 11.278807330243929 0.9643631916983615 0.9631814406844567 0.0 0.045237771104218026 0.0 0.0 0.005987225663588618 0.0 0.0005299786113847112 3.2757416570879516 -0.0011817510139048304 TDNSVAS(ph)SPSSAISTATPSPK ddPTM_A549_PD325901_60min_R1 1 TDNSVASSPSSAISTATPSPK 21 0 H0Y6I7;F5H5V6;F5H6S1;F8W8R6;A0A087X0R0;O15550 H0Y6I7 KDM6A Lysine-specific demethylase 6A 1 T(0.001)DNS(0.003)VAS(0.424)S(0.424)PS(0.063)S(0.063)AIS(0.01)T(0.01)AT(0.002)PSPK 55.841 0.006451100000000001 2985300.0 370.51 471.41 213.12 527.69 253.32 414.98 460.32 365.36 408.09 411.85 725.48 True False 408.123902444954 511.13737511353906 227.58360479467 560.2842128290577 235.52767710655743 411.6005404661805 477.83772949676904 358.07260818062457 390.93939647120243 385.8457207132391 636.2505591966308 0.6414515422356193 0.8033586261345415 0.35769493873927766 0.8806030968939454 0.37018069957211386 0.646915801513625 0.7510213116356494 0.5627855300162709 0.6144425192566064 0.6064367490701017 1.0 9.313451208939249 -10.654428961941834 0.7018686760695024 1.0293531797146998 0.6217135263471428 0.0 0.19102280172680375 0.5653902120190749 0.4412233833688501 0.13504199879283163 0.02759865236379485 2.216006541460328e-11 10.654428961941834 -0.4076396533675569 TDNVSDFSES(ph)SDSENSNKR ddPTM_A549_MK2206_60min_R1 2 TDNVSDFSESSDSENSNKR 19 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 TDNVSDFSES(0.606)S(0.393)DSENSNKR;TDNVSDFS(0.013)ES(0.587)S(0.399)DSENSNKR 147.93 3.1745999999999997e-21 16399100.0 5012.4 5238.1 4690.799999999999 4515.6 6094.9 5408.0 4841.0 5232.9 7384.0 6348.2 6151.6 True False 5858.370578585683 5504.696916265957 5356.025975030977 5621.9222027129845 5198.348283865211 5980.270970460131 5720.547037081024 5974.679600084137 5711.5357898250095 4914.137210983622 4623.987944477066 1.266951957689028 1.1904652396079056 1.158313135618847 1.2158167949870762 1.1242132000093483 1.293314567915996 1.2371457507612447 1.2921053583671969 1.235196946533332 1.0627487073907953 1.0 12.174921921154263 -10.611663036738857 0.8719746416855276 0.9985937378376647 1.2216958610436686 0.6573611606206895 0.05281791617330523 0.25608795119575045 0.34445444824714766 0.036296365272281174 0.009668313207974497 2.445327113336674e-11 10.611663036738857 0.22310212320600387 TDPANSQKAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TDPANSQKASPK 12 1 Q8WUU4;Q8IX33 Q8WUU4 ZNF296 Zinc finger protein 296 1 T(0.001)DPANS(0.005)QKAS(0.994)PK;T(0.001)DPANS(0.005)QKAS(0.994)PK 53.995 0.0060049 15115200.0 6306.7 6752.099999999999 6535.1 5821.0 7346.4 6886.0 6121.7 6820.1 5853.0 6227.9 7703.2 True False 6946.951541252844 7321.123163497011 6978.6111847487255 6180.549949549818 6830.414207704141 6829.922699046027 6354.664643422774 6684.067755235049 5607.018764355776 5834.669331139935 6755.755234608103 1.0283012483438252 1.083686857983348 1.0329875702125775 0.9148569974661535 1.011051166080378 1.0109784120149858 0.9406297923390359 0.9893886801869588 0.829961798442959 0.8636590771155137 1.0 12.721901343971618 -6.570103869037519 0.6047471140008165 0.9257171948376319 1.0686793879333794 0.38949868103242136 0.05753254199975563 1.139165264886379 0.6233844267066633 0.013929562211421768 0.08502972996790582 2.690891153795063e-07 6.570103869037519 0.14296219309574743 TDPPAVNGASLGPSIS(ph)EPDLTSVK ddPTM_A549_MK2206_60min_R1 2 TDPPAVNGASLGPSISEPDLTSVK 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 TDPPAVNGASLGPS(0.005)IS(0.995)EPDLTSVK;TDPPAVNGASLGPS(0.141)IS(0.853)EPDLT(0.005)S(0.001)VK 132.78 3.5876e-23 8203000.0 3758.7999999999997 3689.8 3460.8 3973.7 5277.0 4034.3999999999996 3583.88 3645.6 5745.200000000001 5303.9 6073.2 True False 4393.193546163091 3877.595059589949 3951.59347965959 4947.256678386169 4500.7602903996285 4461.317530182023 4235.024605505876 4162.3749641817585 4443.921373199165 4105.7453062814675 4565.056828206988 0.9623524331653502 0.8494078399267041 0.8656175877687052 1.0837229117976386 0.9859155011148868 0.9772753545182677 0.9277046847123832 0.9117903940347244 0.9734646337238695 0.8993853660073879 1.0 12.15641710440326 -2.0000000000000004 0.19891318501407684 0.9937624928280131 0.5699657699423232 0.0 0.06536750113731124 69.95033408833322 0.775256653109852 0.04926705504402773 9.34184757024414 0.00999999999999999 2.0000000000000004 -0.4237967228856899 TDPPAVNGASLGPSIS(ph)EPDLTSVK ddPTM_A549_PD325901_60min_R1 2 TDPPAVNGASLGPSISEPDLTSVK 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 TDPPAVNGASLGPS(0.051)IS(0.948)EPDLT(0.001)SVK;TDPPAVNGASLGPS(0.074)IS(0.925)EPDLT(0.001)SVK 129.73 4.9898999999999993e-23 16413700.0 2688.9 2990.1000000000004 3139.1 3213.8 3732.5 3370.8 3630.6 3381.6000000000004 3668.0 3463.7 3663.0 True False 2961.8751485364423 3242.0862207568616 3352.1382029417605 3412.3091269306333 3470.3420764259654 3343.3493223851774 3768.7644697405494 3314.151335186119 3513.8467158135954 3245.0013908812602 3212.474221670147 0.9219918804505084 1.0092178168736619 1.0434755181316298 1.0622059171440117 1.0802707934639098 1.0407396578724883 1.1731656691026116 1.0316507173287481 1.093813202331867 1.0101252701085341 1.0 11.649469162184834 -5.253929465767878 1.614057435321851 1.0566927218906592 0.8703190756710159 0.4556966363764531 0.04456000044980116 0.8100389507271122 1.937226340367176 0.006869294185403555 0.23723597528771084 5.572762494153408e-06 5.253929465767878 -0.18637364621964336 TDPVPEEGEDVAAT(ph)ISATETLSEEEQEELRR ddPTM_A549_PD325901_60min_R1 1 TDPVPEEGEDVAATISATETLSEEEQEELRR 31 1 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RFR7;H0YC44;P55327-8 H0YC42 TPD52 Tumor protein D52 1 TDPVPEEGEDVAAT(0.369)IS(0.098)AT(0.098)ET(0.098)LS(0.337)EEEQEELRR 56.637 0.0023381 3130700.0 501.4 459.17 635.82 682.65 538.96 500.44 568.71 524.14 524.11 661.98 543.55 True False 552.301758888829 497.8658673572554 678.9705686962607 724.8157400893632 501.1053089110618 496.3645825603533 590.3525702600527 513.6856165201243 502.08347934162066 620.1824698257861 476.6967958473407 1.1586017856635653 1.0444078325978385 1.4243237517243497 1.5204963540839094 1.0512034342927234 1.0412584831371745 1.2384236172821048 1.0775940199200102 1.0532554103896472 1.3009998708369668 1.0 8.896928118033818 -7.98276997440468 0.6880081114141022 1.0164759050314303 1.251544334050811 0.014671249330462599 0.16579768605680834 0.6300871777351146 0.6082248884025717 0.033610336162342914 0.05530444354037192 1.040471109083307e-08 7.98276997440468 0.23506842901938074 TDPVPEEGEDVAATISATET(ph)LSEEEQEELRR ddPTM_A549_PD325901_60min_R1 1 TDPVPEEGEDVAATISATETLSEEEQEELRR 31 1 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RFR7;H0YC44;P55327-8 H0YC42 TPD52 Tumor protein D52 1 TDPVPEEGEDVAAT(0.074)IS(0.074)AT(0.074)ET(0.39)LS(0.39)EEEQEELRR 89.57700000000001 2.9953e-09 4290700.0 542.85 632.58 557.91 564.16 570.92 727.8 600.66 679.93 633.37 849.92 612.67 True False 597.9597323749514 685.8897366397031 595.773127585371 599.0068818996778 530.8205487670766 721.8730381013208 623.5184449937641 666.368262755234 606.7516615035055 796.2559061517454 537.3154740351209 1.1128652742576077 1.2765121605168415 1.1087957752477253 1.114814128469571 0.9879122683378745 1.3434808282743342 1.1604326975943533 1.2401806665848558 1.1292279690866411 1.4819150845815752 1.0 9.069625576288528 -10.038433682894196 0.8476596501273295 1.0107344028545764 1.1660867415628124 0.0 0.16802078204436027 0.48846938046809407 0.706392540996002 0.03878268221670896 0.01785335045362405 9.15306016552448e-11 10.038433682894196 0.15535233870823606 TDPVPEEGEDVAATISATETLSEEEQEELRR ddPTM_A549_PD325901_60min_R1 2 TDPVPEEGEDVAATISATETLSEEEQEELRR 31 1 H0YC42;P55327-2;P55327;P55327-3;P55327-4;P55327-7;P55327-5;P55327-6;E5RFR7;H0YC44;P55327-8 H0YC42 TPD52 Tumor protein D52 0 ; 80.904 8.1614e-06 2934800.0 550.8399999999999 496.26 471.94 298.5 531.41 764.86 303.03 473.47 387.97 622.5 773.64 False True 606.7608712930246 538.0815718246214 503.9686864057647 316.93766705731343 494.085594864976 758.6312337485251 314.56197247437876 464.0262694199704 371.664970102018 583.1952437634853 678.487184508024 0.894284940301402 0.7930607741910236 0.7427829116200566 0.46712402871268266 0.7282165472635139 1.1181216846396504 0.4636225704137211 0.6839130937402144 0.5477848050608575 0.8595523350766963 1.0 9.406177755571646 -11.00525398604346 1.3043239619742915 0.9989794074735316 0.6972618527452584 0.1498643309261728 0.18446637630482143 0.48283341871773044 1.4704459859544428 0.1272533965865876 0.029365613081773774 9.879751336292266e-12 11.00525398604346 -0.3017175547282732 TDQADGPREPPQS(ph)AR ddPTM_A549_PD325901_60min_R1 2 TDQADGPREPPQSAR 15 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 TDQADGPREPPQS(1)AR;TDQADGPREPPQS(1)AR 87.49 1.0980999999999999e-05 21728000.0 1000.79 891.05 1172.62 1174.06 1294.2 1141.15 1392.3899999999999 684.2 1194.8000000000002 1168.6299999999999 1215.72 True False 1102.3894640573415 966.1419106402469 1252.201044736889 1246.5790197162785 1203.2998567476182 1131.8568527470766 1445.3781633950434 670.5530942554838 1144.5867110289216 1094.8425023603559 1066.1941470840375 1.033948148254514 0.9061594581836468 1.174458749526591 1.16918576520569 1.1285935681025399 1.061586068393474 1.3556425603611184 0.628922130260607 1.0735255995911084 1.026869736018219 1.0 10.058254452151338 TDQADGPREPPQS(ph)ARR ddPTM_A549_PD325901_60min_R1 1 TDQADGPREPPQSARR 16 2 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 TDQADGPREPPQS(1)ARR 43.163999999999994 0.014209999999999999 5346200.0 506.05 532.77 400.75 466.65 690.66 370.56 392.28 673.35 336.28 469.53 477.04 True False 557.4238234656798 577.6683976564776 427.94730490551774 495.47391066095577 642.1504242476509 367.54228221877656 407.20843006385263 659.9195060171437 322.14732104520067 439.8837956695091 418.36710420571296 1.332379668148077 1.3807691662402681 1.0228990295926663 1.1843041808978583 1.5348970265403628 0.878516208669347 0.9733280316982724 1.5773694905339841 0.7700111165690489 1.051430170411334 1.0 8.70862560812572 -8.792490488714119 24.99973496416709 0.8913941142834095 1.220937020094284 0.2528827172956244 0.2205046229226151 168.59253277791123 135735.74029291802 0.03761102496227081 0.04004133921126015 1.6125363423758984e-09 8.792490488714119 0.3295429058108744 TDQEAPNASQPT(ph)PPPLPK ddPTM_A549_MK2206_60min_R1 2 TDQEAPNASQPTPPPLPK 18 0 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 TDQEAPNAS(0.005)QPT(0.995)PPPLPK;TDQEAPNAS(0.113)QPT(0.886)PPPLPK 96.666 2.2521e-06 12139700.0 1435.8600000000001 1755.78 1526.3 1611.8600000000001 1934.06 1564.6100000000001 1896.31 1352.29 2668.6 2348.0 2495.4 True False 1678.1980645934161 1845.141702457272 1742.7522908010947 2006.7657723591442 1649.5623360337897 1730.1759916959381 2240.844980765775 1543.9812487144372 2064.166360878523 1817.585169243178 1875.7233104636307 0.8946938257000221 0.9836960985472853 0.9291094699731225 1.0698623625161021 0.8794273264248448 0.9224046969210417 1.1946564657299563 0.8231391272376972 1.1004642045890627 0.9690049481732557 1.0 10.873231315040895 TDQEAPNASQPT(ph)PPPLPK ddPTM_A549_PD325901_60min_R1 2 TDQEAPNASQPTPPPLPK 18 0 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 TDQEAPNAS(0.002)QPT(0.998)PPPLPK;TDQEAPNAS(0.058)QPT(0.942)PPPLPK 131.51 1.5548e-12 19354200.0 3255.4 3560.0 4009.4 3149.1000000000004 3386.8 3834.7 3650.0 3657.6 4183.3 4525.3 3897.7 True False 3585.885811501184 3860.013693821087 4281.501994480806 3343.6127548749946 3148.922851825711 3803.471474590731 3788.902747356636 3584.646298668308 4007.4904488176185 4239.571785707471 3418.3076095560264 1.0490237336969574 1.1292177693517846 1.2525209792447243 0.9781485860218609 0.9211935295181631 1.112676771381827 1.1084148005769274 1.0486611236061012 1.172360976997654 1.2402546142586948 1.0 11.739066513979381 -6.271361842836479 24.99125935590725 1.0678701498541556 1.1421505268423022 0.09732664660620349 0.09527332673377971 1145.0290982901959 2883933.0186028727 0.01302257954539685 0.030610384422186325 5.353504316288896e-07 6.271361842836479 0.0742803769881466 TDQGILVTNQDACALASSVSS(ph)PVK ddPTM_A549_MK2206_60min_R1 1 TDQGILVTNQDACALASSVSSPVK 24 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 TDQGILVT(0.001)NQDACALAS(0.18)S(0.18)VS(0.156)S(0.484)PVK 53.895 0.0017050999999999998 1707500.0 833.79 802.24 565.42 723.23 968.25 760.51 643.19 791.29 1062.5 1265.7 1181.1 True False 974.5133677916685 843.0705893559108 645.6050581568202 900.4213824670286 825.8217076330192 840.9866634143186 760.0492974137875 903.4577807239914 821.8454464638505 979.7774909331735 887.8002732983066 1.0976718492901678 0.9496174023733756 0.7271962822880239 1.014216158237745 0.9301886161455796 0.9472701109788256 0.8561039236787957 1.0176362948926732 0.9257098372031084 1.1036012495165812 1.0 9.79409134255358 -11.033113743703451 0.5762319183904475 1.0176736485258835 0.9339735871646313 0.12640737074646813 0.09546487659411643 3.8062790740902503 1.4686277089998534 0.17934761460080648 0.01851895560837344 9.265871142106864e-12 11.033113743703451 -0.08370006136125219 TDQGILVTNQDACALASSVSS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 TDQGILVTNQDACALASSVSSPVK 24 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 TDQGILVTNQDACALASSVS(0.318)S(0.681)PVK 122.31 1.274e-16 4631600.0 1507.7 1466.0 1713.8 1159.4 1493.5 1521.9 1779.1 1629.9 1361.1 1552.1 1558.0 True False 1660.7605940899216 1589.5449649274465 1830.1087739165973 1231.0135048115553 1388.6017122952937 1509.5061509843379 1846.8046240608742 1597.390365868186 1303.8977003527498 1454.100141116957 1366.3758769757271 1.2154492933275227 1.1633292066350522 1.3393889666489684 0.9009332831140311 1.0162662673529923 1.1047517571266032 1.3516080422529895 1.1690709655997262 0.9542745318650797 1.064202146436744 1.0 10.416138694537944 -8.759402495819606 24.98284637926512 0.9784074114229347 1.155289041526955 0.21776055630904845 0.12478904431900871 49.59457055435333 608288.8688561309 0.021425082825249228 0.023709498612992673 1.7401933479025496e-09 8.759402495819606 0.17688163010402025 TDRGTDDS(ph)PKDSQEDLQER ddPTM_A549_MK2206_60min_R1 2 TDRGTDDSPKDSQEDLQER 19 2 Q969E4;Q6IPX3-2;Q6IPX3;Q5H9L2 Q969E4 TCEAL3;TCEAL6;TCEAL5 Transcription elongation factor A protein-like 3;Transcription elongation factor A protein-like 6;Transcription elongation factor A protein-like 5 1 T(0.001)DRGT(0.004)DDS(0.964)PKDS(0.031)QEDLQER;T(0.006)DRGT(0.02)DDS(0.966)PKDS(0.008)QEDLQER 65.753 0.00039629 5201700.0 784.35 1518.3400000000001 1242.46 1058.36 1446.71 1145.83 1200.6399999999999 952.47 1664.21 1437.2 1705.76 True False 916.7291044836174 1595.6170206455113 1418.6595107310027 1317.6582475115865 1233.9008754451481 1267.0809700596028 1418.7807466641111 1087.4855393170403 1287.2690921972749 1112.5355218212496 1282.1727154189473 0.7149809799096202 1.2444634029855695 1.1064496176456684 1.027676093607283 0.9623515308091497 0.9882295534931788 1.1065441727174232 0.8481583847786892 1.0039747974021287 0.8676955206130174 1.0 10.324374898330916 -6.5324182179446035 21.782697613485627 0.9948214077140197 1.0480225772330576 0.003777827856395355 0.1362753830235412 126.0869330338994 287910.0362677404 0.0167275932941351 0.03488477701556091 2.934822108690745e-07 6.5324182179446035 0.05320116951903786 TDS(ph)ASADPDNLK ddPTM_A549_MK2206_60min_R1 1 TDSASADPDNLK 12 0 Q96Q15;H3BR09;E9PNP6;I3L0W2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 1 T(0.162)DS(0.835)AS(0.003)ADPDNLK 97.86 0.00025266 3938200.0 3342.4 3625.2 2433.2 2899.9 3772.2 2960.2 2405.0 3241.8 3763.7 4390.8 4044.1 True False 3906.5154061656685 3809.7071955188585 2778.264347754194 3610.375630181459 3217.314377003123 3273.4463991782713 2841.95736917576 3701.3350775961226 2911.227959393879 3398.915230456964 3039.838358518059 1.2851062936353366 1.253259794174094 0.9139513421722253 1.1876867136914282 1.0583833735723975 1.0768488363881616 0.9349041080464663 1.2176091755748972 0.9576916980589459 1.118123672902778 1.0 11.569778895974236 -2.0000000000033467 0.3501973554674792 0.9913767489602661 4.480937731801596 0.24141869767374002 0.10927288257565448 35.21295670321013 0.4327323217273858 0.025188285591795766 82.40347786238793 0.00999999999992294 2.0000000000033467 3.48956098284133 TDS(ph)CS(ph)SAQAQYDTPK ddPTM_A549_MK2206_60min_R1 1 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 2 T(0.058)DS(0.936)CS(0.645)S(0.361)AQAQYDTPK 131.53 2.7542e-09 10256000.0 1218.1 2435.0 1894.2 1346.3 2746.1 2167.6 1829.7 1908.1 3785.3 2889.8 2539.7 True False 1423.685500314266 2558.9310992740884 2162.8260428719345 1676.1435604377027 2342.152327736672 2396.973993263569 2162.1328059795796 2178.579018311175 2927.935593881989 2236.992172946737 1909.0223978458305 0.7457667871894924 1.3404405847525018 1.1329495375813818 0.8780114692887251 1.2268857245360723 1.255602865617685 1.1325864004630657 1.1412013922778046 1.5337355901040843 1.1717998570739623 1.0 10.89861831410459 -6.9514814466540455 23.741468024045975 1.2390338222485078 1.0543613605573048 0.16670780356221526 0.18684723864198552 115.57886823364353 56554.848900264646 0.03302041734174069 0.06240270656432983 1.1181975937006233e-07 6.9514814466540455 -0.184672461691203 TDS(ph)CSS(ph)AQAQYDTPK ddPTM_A549_MK2206_60min_R1 1 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 2 T(0.055)DS(0.904)CS(0.075)S(0.965)AQAQY(0.001)DTPK 129.01 3.5258e-09 8273800.0 1477.2 1830.0 1408.0 1349.0 2521.9 2277.2 1959.5 1875.2 2532.9 2689.0 2701.3 True False 1726.5152459274557 1923.1391834380202 1607.6755719373261 1679.5050605589122 2150.9318507407297 2518.171792516977 2315.515785821165 2141.015342559149 1959.202194210152 2081.5530324083925 2030.492657912723 0.8502937645203082 0.947129346143483 0.7917662571555228 0.8271416564910833 1.0593152565012542 1.2401777384930668 1.140371415182282 1.0544314623427595 0.9648900657558372 1.0251467910000511 1.0 10.987614095272242 -6.760314740376275 24.998795840724227 1.0247286463598146 0.8562777444248034 0.5670024592809206 0.08494002006916282 24.281413493495833 539709.7140541074 0.014493219702256753 0.02888383747853705 1.736541872065986e-07 6.760314740376275 -0.16845090193501122 TDS(ph)CSS(ph)AQAQYDTPK ddPTM_A549_PD325901_60min_R1 1 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 2 T(0.374)DS(0.614)CS(0.016)S(0.996)AQAQYDTPK 182.7 3.6643e-33 13908000.0 2817.9 3510.2 4087.5 2954.4 2970.9 3342.8 2782.1 3662.9 2250.6 3203.3 3320.8 True False 3103.971133571663 3806.01687304797 4364.902330134257 3136.8865780707765 2762.2342330486017 3315.577345101807 2887.9743379235365 3589.84058601054 2156.0151086723235 3001.0430913214013 2912.36265228562 1.0657914223476492 1.3068485375820251 1.4987495896874947 1.0770933954976214 0.9484513307025149 1.1384493419800397 0.9916259349284873 1.2326214193116494 0.7402976092212571 1.0304496553566862 1.0 11.50797429819252 -7.284469043436012 0.6481981020933808 0.8942939679510838 1.2788722799950754 0.2248200797650567 0.16811277819381182 0.6048059120127707 0.48649154013579887 0.03685804983356872 0.10537153635268874 5.1943469755646514e-08 7.284469043436012 0.3845783120439915 TDS(ph)IGEK ddPTM_A549_MK2206_60min_R1 1 TDSIGEK 7 0 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;Q7Z3U7-3 A0A286YFF8 MON2 Protein MON2 homolog 1 T(0.172)DS(0.828)IGEK 100.02 0.011314 164190000.0 5073.0 6440.9 5665.9 3669.7 4828.3 2948.9 2728.0 4127.1 3863.7 8371.8 9043.1 True False 5929.1983770579345 6768.714298691773 6469.409817499789 4568.776664739094 4118.063466010336 3260.950640678605 3223.642288196042 4712.129063713664 2988.5781190610624 6480.6045655323815 6797.448693136834 0.8722682060174218 0.9957727677335656 0.9517408824331024 0.6721310996215449 0.6058248692878275 0.47973155633687714 0.47424297464000725 0.693220247248258 0.4396617398640366 0.9533877868141382 1.0 12.730777641550386 -6.261554686314655 22.93540408932379 0.677542550972142 0.9455118671817034 0.33138123488493043 0.1733269865622652 3.814594140441868 759206.1399578141 0.03137913120481816 0.07751695015215192 5.475771457650118e-07 6.261554686314655 0.26796931620956144 TDS(ph)IGEK ddPTM_A549_PD325901_60min_R1 2 TDSIGEK 7 0 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;Q7Z3U7-3 A0A286YFF8 MON2 Protein MON2 homolog 1 T(0.032)DS(0.968)IGEK;T(0.168)DS(0.832)IGEK 117.31 0.007021800000000001 816100000.0 25691.0 28801.0 30312.0 27702.0 31920.0 28452.0 28969.0 26324.0 28010.0 28886.0 30323.0 True False 28299.13140728542 31228.161347118297 32369.154600863545 29413.089624193293 29678.04931802194 28220.29634523055 30071.431147445066 25798.9471692215 26832.83710739882 27062.133030284407 26593.463233334383 1.0641386253074783 1.1742795992052066 1.2171846260433445 1.1060270475537224 1.1159903867210905 1.061174172676275 1.1307828124375736 0.970123633122106 1.0090012298121587 1.0176234961515864 1.0 14.69878404934398 -7.787802506638098 0.9010753683578692 1.0006563792875058 1.146942762802113 0.603280333225271 0.04661611564258966 0.2393183345728336 0.391485540171146 0.008438140076626941 0.01460554107037518 1.630037115795016e-08 7.787802506638098 0.1462863835146071 TDS(ph)KTHYK ddPTM_A549_PD325901_60min_R1 1 TDSKTHYK 8 1 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 T(0.095)DS(0.755)KT(0.15)HYK 50.292 0.013323 6437500.0 1231.0 1252.1 898.6 1085.7 1156.8 872.93 999.34 1157.5 1224.9 1190.0 1513.2 True False 1355.9702137856968 1357.618861245332 959.58439972077 1152.7612231963985 1075.5503587433511 865.821147499019 1037.3704305598308 1134.4127544588168 1173.4217127044913 1114.8631969133298 1327.0859929651288 1.0217651463233604 1.0230074527514101 0.7230762775038833 0.8686409391005373 0.8104601845282327 0.6524227910540307 0.7816904375895174 0.8548148051236536 0.8842092516421615 0.8400836138902904 1.0 10.374046142638289 -9.814584916976337 0.8634670053038412 0.9852983830473477 0.83815447537186 0.006712167611470754 0.11397015290028861 0.5937177127508797 0.9177565392015529 0.04138084891744145 0.022865554777021478 1.5325515194675812e-10 9.814584916976337 -0.14714390767548768 TDS(ph)LAAT(ph)PPAAK ddPTM_A549_MK2206_60min_R1 2 TDSLAATPPAAK 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 T(0.102)DS(0.898)LAAT(1)PPAAK;T(0.072)DS(0.928)LAAT(1)PPAAK 89.663 0.00041888 4484200.0 2899.7 3611.4 2574.3 3139.5 5060.5 4176.7 3645.5 3890.8 4954.799999999999 5440.1 5910.1 True False 3389.09846914151 3795.204834463426 2939.3744494589905 3908.6776409375084 4316.107153603813 4618.675621730924 4307.840161883674 4442.332815075268 3832.5457111897294 4211.177631686463 4442.459059537994 0.7628879464550359 0.85430271469021 0.6616548200141835 0.8798455064083365 0.971558115845119 1.0396664459551048 0.9696972114204875 0.9999715823013708 0.8627081667666073 0.9479384222224924 1.0 12.117142765502722 -6.495345505607875 5.938710099315927 0.9508549641740068 0.7683221853950626 0.6936831737251367 0.06040781785673692 0.10042650549248741 11.33147043186345 0.009940967065392471 0.02264741946083042 3.196351221331491e-07 6.495345505607875 -0.18253277877894425 TDS(ph)PDMHEDT ddPTM_A549_MK2206_60min_R1 3 TDSPDMHEDT 10 0 Q9BW61 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 1 T(0.162)DS(0.838)PDMHEDT;T(0.172)DS(0.828)PDMHEDT;T(0.108)DS(0.886)PDMHEDT(0.006) 150.06 1.0054e-08 415420000.0 5607.05 5155.1 4609.349999999999 4067.7799999999997 6363.450000000001 5058.231 3881.1 4845.0199999999995 7397.369999999999 6902.66 8151.74 True False 6553.382960789016 5417.47257078762 5263.025140276505 5064.38628260958 5427.394934611241 5593.489647038003 4586.2456322278795 5531.816422251455 5721.877506172512 5343.34431189443 6127.437981421333 1.0695143681028134 0.8841333991814588 0.8589275250494961 0.8265095947058179 0.8857527323927793 0.9128594469658795 0.7484768750224127 0.9027943553283071 0.9338123900268761 0.8720356416655198 1.0 12.581068261657313 -9.317670065404906 1.1730813085407388 0.9831421356410558 0.8807397974896758 0.0 0.08066725314871649 0.40385302910902643 1.1587119072687795 0.017757005752301484 0.014678151122354245 4.812047820882293e-10 9.317670065404906 -0.10240233815138 TDS(ph)PDMHEDT ddPTM_A549_PD325901_60min_R1 3 TDSPDMHEDT 10 0 Q9BW61 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 1 T(0.155)DS(0.845)PDMHEDT;T(0.016)DS(0.984)PDMHEDT;T(0.137)DS(0.826)PDMHEDT(0.037) 153.7 6.665600000000001e-09 541410000.0 5000.1900000000005 4543.34 4651.55 4692.62 5889.799999999999 5461.539999999999 5209.989999999999 5299.35 5387.58 5471.3 6425.05 True False 5507.805607854675 4926.223206653118 4967.232155042452 4982.472479686732 5476.120766706943 5417.063029007812 5408.259020465924 5193.6503069903465 5161.158748414128 5125.841184262101 5634.80958174769 0.9774608224021613 0.87424839032896 0.8815261781218555 0.8842308524188622 0.9718377679425455 0.9613568924413695 0.9597944601330256 0.9217082195312599 0.9159419983120967 0.9096742507263702 1.0 12.460151142599955 -14.999999996046673 0.24441400898034693 1.4601056285272698 0.9168709404190142 0.0 0.044781193022607906 35.97811148463464 0.45969739381235214 8.006645778457383 0.01998151386022336 1.0000000091028708e-15 14.999999996046673 -0.5432346881082556 TDS(ph)PWIKPAR ddPTM_A549_MK2206_60min_R1 1 TDSPWIKPAR 10 1 A0A0D9SER9;A0A1W2PPZ7;A0A0D9SEQ1;A0A1B0GVZ8;A0A1B0GUD1;A0A1B0GU48;A0A1B0GV09;Q9H9B1-4;Q9H9B1-3;Q9H9B1;A0A0C4DGF8 A0A0D9SER9 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 T(0.229)DS(0.771)PWIKPAR 117.2 2.0976e-05 8823600.0 2685.4 2264.4 1653.3 1590.7 3021.4 2486.8 2270.4 2616.4 3490.7 3511.9 4079.6 True False 3138.6298682734828 2379.6482879656023 1887.7628004857822 1980.4215714092363 2576.956062424379 2749.9515253957584 2682.9022914663815 2987.2827123889515 2700.062023502459 2718.5593508795214 3066.5227287679045 1.0235143013384904 0.776008690769339 0.6156037203886191 0.6458199552314906 0.8403512024382653 0.8967654143234278 0.8749005074370808 0.97415965137464 0.8804963348787291 0.8865283551874436 1.0 11.5823879287955 -7.232158560451923 2.229147220449217 0.9389055813241641 0.7560642131856535 0.30498075122113444 0.10512853851028975 0.2582672406317107 2.5082382019357174 0.016698813057525966 0.03052609313718215 5.859242051561545e-08 7.232158560451923 -0.1828413681385106 TDS(ph)PWIKPAR ddPTM_A549_PD325901_60min_R1 1 TDSPWIKPAR 10 1 A0A0D9SER9;A0A1W2PPZ7;A0A0D9SEQ1;A0A1B0GVZ8;A0A1B0GUD1;A0A1B0GU48;A0A1B0GV09;Q9H9B1-4;Q9H9B1-3;Q9H9B1;A0A0C4DGF8 A0A0D9SER9 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 T(0.201)DS(0.799)PWIKPAR 71.176 0.0007679 10331000.0 2056.7 1788.2 1793.7 2424.8 2176.4 2264.7 2219.3 2259.3 2413.0 2356.7 3336.1 True False 2265.4946699374827 1938.8978896884455 1915.4312683943292 2574.574388879642 2023.5371721723968 2246.2570340588923 2303.756675947559 2214.236489113437 2311.590001433535 2207.8975598030624 2925.7808492803097 0.7743213817585669 0.6626941625396789 0.6546735271937717 0.8799614603783266 0.6916229466298377 0.7677461675270147 0.7873989183141459 0.756801894324416 0.7900762635732423 0.7546353173875501 1.0 11.514605995526999 -11.444079147538604 0.2671029649289424 1.20855413450098 0.7125551611570023 0.0 0.09474298030423538 2.559101778870739 0.16869174050246064 0.40836949301508807 0.03274104365601411 3.5968377899236693e-12 11.444079147538604 -0.4959989733439777 TDS(ph)REDEIS(ph)PPPPNPVVK ddPTM_A549_MK2206_60min_R1 2 TDSREDEISPPPPNPVVK 18 1 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644 K7EMU2 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed 2 T(0.146)DS(0.859)REDEIS(0.994)PPPPNPVVK;T(0.135)DS(0.867)REDEIS(0.998)PPPPNPVVK 69.133 0.00042601 8850400.0 2870.8 2914.0 3478.3 2751.8 4235.1 3431.8 2783.3 3000.0 4050.9 3823.2 3924.7 True False 3355.320855678673 3062.3101532996675 3971.575242805118 3425.991123532998 3612.1224002030444 3794.9507981555253 3288.989582381245 3425.25918711468 3133.3776179580354 2959.5364646722815 2950.088673790418 1.1373627123443693 1.0380400360525643 1.346256225478892 1.1613180152754925 1.2244114667787303 1.2863853320312528 1.1148782108150637 1.1610699086931986 1.062129977921009 1.0032025447118933 1.0 11.5265426043281 -8.794808885892706 1.1295653155175522 1.018679061015798 1.19464602841198 0.46832760838998 0.0784721307777789 0.2694213542798284 0.6837711899302665 0.01658072445767933 0.01728646437743757 1.603951064493298e-09 8.794808885892706 0.1759669673961819 TDS(ph)SPNQAR ddPTM_A549_MK2206_60min_R1 1 TDSSPNQAR 9 0 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 T(0.011)DS(0.494)S(0.494)PNQAR 61.48 0.0076138 492460000.0 1837.7 1897.9 1299.5 989.83 886.21 892.33 770.51 842.09 708.63 1745.0 2321.6 True False 2147.8588325486617 1994.4950034136714 1483.7886404350538 1232.3383944351579 755.8496829552887 986.7557683192848 910.5016933570132 961.4588362924668 548.1264364495798 1350.8032880448661 1745.08264709961 1.2308063667462856 1.142922947935213 0.8502684058552549 0.7061776681370068 0.4331311667166813 0.5654493040540562 0.5217527633263099 0.5509531814383954 0.31409769466253395 0.7740626441331874 1.0 10.769079648740128 -5.893809252046495 1.8572683454015444 0.6248800765215708 1.235189371728065 0.6337601959271045 0.1706313891812868 0.2756337237086377 1.7679389576959097 0.03639497864736428 0.18950817360525943 1.276999560969042e-06 5.893809252046495 0.6103092952064942 TDS(ph)SPNQAR ddPTM_A549_PD325901_60min_R1 2 TDSSPNQAR 9 0 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 T(0.012)DS(0.494)S(0.494)PNQAR;T(0.061)DS(0.469)S(0.469)PNQAR 112.95 0.00025794 720444900.0 4962.53 4791.24 3540.16 3900.62 4348.74 3607.54 2585.17 3002.874 3873.7599999999998 5072.120000000001 6000.94 True False 5466.322392378503 5195.014609658245 3780.4165463114628 4141.552438449239 4043.299504738554 3578.161390316076 2683.550059009304 2942.979322360919 3710.9593385632697 4751.865477586589 5262.862423092887 1.0386595644972314 0.9871081917062978 0.7183194699757669 0.7869391417637183 0.7682700362823434 0.679888832855573 0.5099031369762144 0.5591974643774527 0.7051218595948794 0.9029051294854114 1.0 12.361631966379365 -5.676124362628038 5.767031232397199 0.7845390204359038 1.0232537264675743 0.333663359616146 0.13793819830509965 0.24463785033196955 12.690955952936196 0.024433670726165164 0.09772587019512673 2.108024419039541e-06 5.676124362628038 0.23871470603167044 TDS(ph)TSDGRPAWMR ddPTM_A549_MK2206_60min_R1 17 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y6I5;A0A2R8Y542;A0A2R8Y5T0;A0A2R8Y706 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.001)DS(0.821)T(0.148)S(0.029)DGRPAWMR;T(0.052)DS(0.914)T(0.03)S(0.004)DGRPAWMR;T(0.084)DS(0.364)T(0.364)S(0.188)DGRPAWMR;T(0.038)DS(0.678)T(0.142)S(0.142)DGRPAWMR;T(0.035)DS(0.748)T(0.181)S(0.035)DGRPAWMR;T(0.023)DS(0.444)T(0.444)S(0.089)DGRPAWMR;T(0.014)DS(0.785)T(0.093)S(0.108)DGRPAWMR;T(0.143)DS(0.635)T(0.181)S(0.042)DGRPAWMR;T(0.136)DS(0.7)T(0.136)S(0.028)DGRPAWMR;T(0.024)DS(0.429)T(0.429)S(0.119)DGRPAWMR;T(0.013)DS(0.791)T(0.098)S(0.098)DGRPAWMR;T(0.032)DS(0.72)T(0.193)S(0.054)DGRPAWMR;T(0.021)DS(0.794)T(0.16)S(0.026)DGRPAWMR;T(0.006)DS(0.951)T(0.042)S(0.001)DGRPAWMR;T(0.001)DS(0.848)T(0.127)S(0.024)DGRPAWMR;T(0.028)DS(0.656)T(0.262)S(0.054)DGRPAWMR;T(0.042)DS(0.659)T(0.149)S(0.149)DGRPAWMR 131.72 1.0435e-08 2349368800.0 51699.799999999996 51225.799999999996 38895.53999999999 39729.50000000001 63837.9 48542.60000000001 45196.2 46126.19999999998 66129.2 68687.3 69971.30000000002 True False 60425.46230124572 53832.97441691768 44411.51243985169 49463.229283525034 54447.429475554745 53679.345712029986 53407.76451091126 52664.73010556305 51151.04178663277 53170.79122459842 52595.49510036216 1.1488714420492192 1.023528237811892 0.844397649553562 0.9404461197511276 1.0352108934740274 1.0206072898372691 1.015443706899215 1.0013163675913457 0.9725365582931941 1.0109381254637586 1.0 15.68265161490936 -5.316801248381499 4.169494302717459 0.9836354028004933 1.154710340898913 0.47073302421770447 0.05061160680451684 0.1283604476356098 4.189861327398427 0.006893905382662799 0.05621595181685024 4.821684079033048e-06 5.316801248381499 0.17107493809841967 TDS(ph)TSDGRPAWMR ddPTM_A549_PD325901_60min_R1 14 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y6I5;A0A2R8Y542;A0A2R8Y5T0;A0A2R8Y706 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.15)DS(0.663)T(0.15)S(0.036)DGRPAWMR;T(0.073)DS(0.367)T(0.367)S(0.193)DGRPAWMR;T(0.044)DS(0.904)T(0.044)S(0.009)DGRPAWMR;T(0.098)DS(0.402)T(0.402)S(0.098)DGRPAWMR;T(0.021)DS(0.437)T(0.252)S(0.291)DGRPAWMR;T(0.006)DS(0.331)T(0.331)S(0.331)DGRPAWMR;T(0.14)DS(0.602)T(0.14)S(0.119)DGRPAWMR;T(0.055)DS(0.876)T(0.055)S(0.013)DGRPAWMR;T(0.131)DS(0.682)T(0.151)S(0.036)DGRPAWMR;T(0.001)DS(0.926)T(0.067)S(0.005)DGRPAWMR;T(0.043)DS(0.728)T(0.219)S(0.009)DGRPAWMR;T(0.006)DS(0.441)T(0.39)S(0.163)DGRPAWMR;TDS(0.487)T(0.487)S(0.027)DGRPAWMR;T(0.048)DS(0.901)T(0.044)S(0.007)DGRPAWMR 219.89 2.3838e-38 2251619200.0 58177.3 57197.48 51297.51 52698.83 53987.99999999999 55586.0 47491.619999999995 47897.020000000004 69114.36 75963.7 85237.9 True False 64083.41666813536 62017.7123741735 54778.867505586655 55953.91704137338 50196.069128488954 55133.326045479596 49298.9395875116 46941.6763616147 66209.7238008611 71167.33901795391 74754.178667567 0.857255310811658 0.8296220155125673 0.7327866947637688 0.7485055422814733 0.6714817823323517 0.737528349962326 0.659480720224949 0.627947189017554 0.8856993011092634 0.9520182053559331 1.0 16.189866606010415 -8.989981928423251 3.4360847278985363 0.9539136052282898 0.7326136461657301 0.6681483896585138 0.06742205882582702 0.10476371946688104 2.5150306749490605 0.014043101405073047 0.014291609986709742 1.023335573762609e-09 8.989981928423251 -0.22129995906255973 TDS(ph)VKTPESEGNPLLEQLEK ddPTM_A549_PD325901_60min_R1 1 TDSVKTPESEGNPLLEQLEK 20 1 Q8WYK2;Q8WYK2-2 Q8WYK2 JDP2 Jun dimerization protein 2 1 T(0.088)DS(0.497)VKT(0.412)PES(0.004)EGNPLLEQLEK 83.693 2.8451e-05 16309000.0 1459.1 1405.3 1688.9 1483.2 1687.1 1791.6 1500.6 1973.0 1497.5 2476.1 2199.8 True False 1607.2267578673516 1523.7295629007795 1803.5189101807346 1574.8138954083995 1568.6039161790352 1777.0098036030877 1557.7061541598268 1933.6469672114424 1434.5652826965265 2319.7586234261303 1929.2385456811332 0.8330886615682392 0.7898087907852859 0.9348345823890781 0.8162878037730678 0.8130689279926381 0.9210938728034277 0.8074201905445892 1.0022850577706826 0.7435914474692613 1.2024218718930482 1.0 10.91381582483176 -11.08213367817785 1.4007710518716299 1.0001235942736084 0.8409302845115934 0.43619064742838787 0.0954308528371349 0.3496662061337256 1.2236835961220827 0.05203182280514065 0.011393200092507163 8.276873578776797e-12 11.08213367817785 -0.15919330976201507 TDS(ph)YSAGQSVEILDGVELGEPAHK ddPTM_A549_MK2206_60min_R1 1 TDSYSAGQSVEILDGVELGEPAHK 24 0 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.214)DS(0.722)YS(0.064)AGQSVEILDGVELGEPAHK 119.97 1.8935999999999998e-16 6047900.0 770.08 1242.8 583.86 809.41 1245.5 1139.2 1018.3 1352.9 2129.1 1831.0 1251.0 True False 900.050677351621 1306.0532115720068 666.6601274370227 1007.7154863357955 1062.288599903873 1259.749387860241 1203.3119289113008 1544.6777180824847 1646.8622494740564 1417.375828315272 940.3421741564493 0.9571523027338718 1.388912725033975 0.7089548312932598 1.0716476555353742 1.1296830335795776 1.3396712627404186 1.2796532602515176 1.6426762092938831 1.7513436010156658 1.5072979467147203 1.0 9.877042013726566 -7.2048044743418265 2.0686567813435244 1.3839996924019018 1.035152526339119 0.37860899370424694 0.2361466330138634 0.4092412228088248 3.416673542458297 0.04834443031055694 0.09044069919231613 6.240157131510324e-08 7.2048044743418265 -0.34884716606278277 TDS(ph)YSAGQSVEILDGVELGEPAHK ddPTM_A549_PD325901_60min_R1 1 TDSYSAGQSVEILDGVELGEPAHK 24 0 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.13)DS(0.363)Y(0.226)S(0.254)AGQS(0.027)VEILDGVELGEPAHK 60.48 0.00013875 2603000.0 1127.6 1091.8 939.67 1141.2 1410.9 861.66 696.54 1013.0 1131.6 1178.5 923.97 True False 1242.0731219047534 1183.8098176724336 1003.4416568947422 1211.6893321467542 1311.8032513407632 854.6429266424623 723.0472108613129 992.7949203168728 1084.0427872450016 1104.089308875932 810.3275475284099 1.5328037726141928 1.4609028426630521 1.238316110510314 1.4953080835552768 1.6188555545740861 1.0546882297772293 0.8922900536538443 1.2251773043444085 1.3377834562720394 1.3625222445460832 1.0 9.662361376383833 -7.270055515727487 24.698895000016137 1.1398757539649147 1.4573936757083727 0.5179580854502703 0.15531128936338165 379.56150081026607 1088044.7424720249 0.025712834200325194 0.04149916436696084 5.3696315215154e-08 7.270055515727487 0.31751792174345805 TDS(ph)YSAGQSVEILDGVELGEPAHKK ddPTM_A549_MK2206_60min_R1 2 TDSYSAGQSVEILDGVELGEPAHKK 25 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.143)DS(0.682)Y(0.006)S(0.169)AGQSVEILDGVELGEPAHKK;T(0.172)DS(0.82)YS(0.008)AGQSVEILDGVELGEPAHKK 185.48 1.1455999999999997e-57 20328000.0 2489.8 2341.8 2047.6799999999998 1925.88 3800.0 3369.1 2347.4 2894.3999999999996 3876.7000000000003 3110.8 3718.7 True False 2910.0173702343477 2460.9876173634752 2338.071814733399 2397.7206864560394 3241.025033829562 3725.615925772416 2773.892194762238 3304.690063728244 2998.633639817796 2408.0681194555705 2795.244159101186 1.0410601738526009 0.8804195545317975 0.8364463644868894 0.8577857782652623 1.1594783315357027 1.3328409661968106 0.9923613240476946 1.182254527916041 1.0727626887455906 0.861487577611069 1.0 11.448758589819988 -6.752039304282788 24.957644035149688 1.0734228987664702 0.8974286564351139 0.3285851516800459 0.12418325104114998 171.63970036946225 455707.8590917791 0.01626665082292971 0.0335076167790709 1.7699487681288858e-07 6.752039304282788 -0.1759942423313563 TDS(ph)YSAGQSVEILDGVELGEPAHKK ddPTM_A549_PD325901_60min_R1 2 TDSYSAGQSVEILDGVELGEPAHKK 25 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.134)DS(0.831)YS(0.035)AGQSVEILDGVELGEPAHKK;T(0.17)DS(0.811)YS(0.019)AGQSVEILDGVELGEPAHKK 207.99 4.404199999999999e-81 45765000.0 12592.3 13539.6 11947.7 13156.7 15751.8 14911.8 12530.4 14251.6 14512.3 16120.6 16193.2 True False 13870.661026038691 14680.62960923033 12758.542769356596 13969.35947796635 14645.447908759954 14790.36324479153 13007.251228897985 13967.340657836075 13902.398498882683 15102.742564841188 14201.53905715234 0.9767012554215377 1.0337351149160627 0.8983915558737272 0.9836510973739105 1.0312577988780762 1.0414619982573394 0.9159043380123738 0.9835089423495748 0.9789360465041287 1.0634581578843014 1.0 13.793759666307738 -6.105134605107458 0.0016796255870379783 1.9632098139490866 2.9900332122761606e-09 0.029751170235850055 0.04788589888460236 771880.0893887077 251.52671729839003 145578.50100229055 148424.08793635035 7.849922966141598e-07 6.105134605107458 -1.9632098109590534 TDSCS(ph)S(ph)AQAQYDTPK ddPTM_A549_PD325901_60min_R1 1 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 2 T(0.001)DS(0.398)CS(0.602)S(0.999)AQAQYDTPK 180.27 2.2690000000000003e-28 17179000.0 3719.4 4078.4 4687.1 4163.0 4039.6 3647.5 4283.9 4211.2 3485.8 3665.8 4034.3 True False 4096.990749922439 4422.101081146045 5005.1947918219685 4420.139055141021 3755.8724318634504 3617.79596932477 4446.926158740027 4127.204312377511 3339.30394819603 3434.34076239066 3538.106675534774 1.157961340807564 1.2498495626838775 1.414653443445271 1.2492950214602931 1.0615486689065874 1.0225231461620505 1.2568660491470025 1.1665008126849925 0.9438109854874018 0.9706719093967313 1.0 11.788761831261656 -7.791684616924729 0.5486980187095427 0.9696426152896646 1.2726188558707823 0.4697325666925237 0.10313474557275258 0.5079677181451734 0.3155523714851381 0.02922976772492006 0.059002248217958124 1.6155313239246853e-08 7.791684616924729 0.3029762405811177 TDSCS(ph)SAQAQYDTPK ddPTM_A549_PD325901_60min_R1 2 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 1 TDSCS(0.5)S(0.5)AQAQYDTPK;TDSCS(0.5)S(0.5)AQAQYDTPK 338.92 2.3954999999999992e-186 47178000.0 16380.199999999999 17825.7 20916.0 17474.7 17321.699999999997 18140.699999999997 17824.5 19927.1 15047.8 17506.6 18803.8 True False 18043.105845534094 19327.934298299595 22335.485538125547 18554.072531076818 16105.083548620949 17992.968153729907 18502.821101440666 19529.63835799247 14415.393296134082 16401.230288304945 16491.051807109227 1.0941149210237628 1.1720255641891442 1.3544003014105388 1.125099402275738 0.9765952916161547 1.0910746242379283 1.1219915696016536 1.1842566857726637 0.8741342556403627 0.9945533177716682 1.0 14.009395797033623 -8.75756142848114 24.999971888498226 0.9405633950937746 1.1399954043379699 0.4432826718193035 0.09123338635463846 65.44794404540184 421922.5720067156 0.017108411574469063 0.019045240177164666 1.7475860588404166e-09 8.75756142848114 0.19943200924419524 TDSCSS(ph)AQAQYDTPK ddPTM_A549_MK2206_60min_R1 2 TDSCSSAQAQYDTPK 15 0 Q96PD2;Q96PD2-2 Q96PD2 DCBLD2 Discoidin, CUB and LCCL domain-containing protein 2 1 TDSCS(0.016)S(0.984)AQAQYDTPK;TDSCS(0.066)S(0.934)AQAQYDTPK 296.27 1.1930999999999996e-123 42065000.0 5619.1 6205.5 5725.799999999999 5107.0 7639.4 6851.299999999999 6245.200000000001 6055.7 9721.8 8414.099999999999 9130.5 True False 6567.4667061947985 6521.33344416647 6537.804538209332 6358.215229261939 6515.654379851985 7576.300018475129 7379.872000821815 6914.114019803461 7519.827822524487 6513.348966153759 6863.144861019549 0.9569179784468622 0.9501960946803764 0.9525960285847899 0.9264288249800107 0.9493686220815186 1.1039108414432677 1.0752901403461712 1.0074265019631743 1.0956825150573004 0.9490327099384833 1.0 12.744654090759717 -7.236641442702798 22.161112876431666 1.049268417220391 0.946430129327205 0.5176348380274876 0.04328908875397384 96.71833121927632 86433.53435719533 0.00588496226835595 0.010187628152050697 5.799072753247142e-08 7.236641442702798 -0.10283828789318594 TDSEEQDKS(ph)R ddPTM_A549_PD325901_60min_R1 1 TDSEEQDKSR 10 1 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 1 TDSEEQDKS(1)R 45.28 0.013299 5072100.0 1219.3 1055.7 809.8 932.9 1373.4 963.15 840.24 779.39 949.47 1060.9 1290.1 True False 1343.0824383987815 1144.6675439794717 864.7578977229905 990.5231142303769 1276.9371219727861 955.3064257313652 872.2157929969703 763.844455030373 909.5670777708661 993.9145929456739 1131.4258786177052 1.1870706369556114 1.0117035199671625 0.7643080417954462 0.8754644320496955 1.128608728247277 0.8443384969225646 0.7708996315892835 0.6751166554220797 0.8039122093283829 0.878461958250387 1.0 10.143926359277229 TDSEEQDKS(ph)RDEDNDEDEER ddPTM_A549_MK2206_60min_R1 1 TDSEEQDKSRDEDNDEDEER 20 2 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 1 T(0.032)DS(0.169)EEQDKS(0.799)RDEDNDEDEER 44.382 0.014874 1581900.0 0.0 0.0 0.0 0.0 159.91 224.33 0.0 118.07 389.57 207.35 311.35 True False 0.0 0.0 0.0 0.0 136.3874508314961 248.0684517017977 0.0 134.80678407421007 301.33301701545633 160.50949098917076 234.03320217714665 0.0 0.0 0.0 0.0 0.5827696649993295 1.0599711895324466 0.0 0.5760156371836969 1.2875652437869411 0.685840681988688 1.0 7.870569408550656 -7.68791000088696 0.5887037511652237 1.139112926222068 3.4120160087287876e-20 0.47336946657145207 0.34404408225493915 0.38934466237160587 0.2732108196158095 0.08233806954344704 0.17642758939516623 2.0515872864736772e-08 7.68791000088696 -1.139112926222068 TDSEEQDKS(ph)RDEDNDEDEERLEEEEQNEEEEVDN ddPTM_A549_PD325901_60min_R1 2 TDSEEQDKSRDEDNDEDEERLEEEEQNEEEEVDN 34 3 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 1 T(0.027)DS(0.146)EEQDKS(0.828)RDEDNDEDEERLEEEEQNEEEEVDN;T(0.012)DS(0.047)EEQDKS(0.941)RDEDNDEDEERLEEEEQNEEEEVDN 61.608000000000004 0.00033343 171683000.0 0.0 172.48 134.23 149.58 495.39 0.0 0.0 170.68 0.0 0.0 204.11 True False 0.0 187.0154949186126 143.33965499056183 158.81921687917233 460.5955154027221 0.0 0.0 167.27565350413025 0.0 0.0 179.00576395989452 0.0 1.044745659477829 0.8007544104706956 0.8872296252692461 2.573076448565738 0.0 0.0 0.9344707667715529 0.0 0.0 1.0 7.483862232585335 TDSEEQDKSRDEDNDEDEERLEEEEQNEEEEVDN ddPTM_A549_MK2206_60min_R1 2 TDSEEQDKSRDEDNDEDEERLEEEEQNEEEEVDN 34 3 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 0 ; 56.163999999999994 0.0018671 9895700.0 213.99 496.90999999999997 237.48 412.02 656.95 480.21999999999997 127.08 149.55 656.6 562.25 870.32 False True 250.1062804468021 522.200596525785 271.15823495999723 512.9649184962803 560.3135252564027 531.0365616557632 150.16879104983605 170.74917047766687 507.88114837474274 435.2373345004159 654.1955243899603 0.3823112068521519 0.7982332147758715 0.41449111901652536 0.7841156036257234 0.856492446625796 0.8117398267910144 0.22954726140914675 0.26100632626138964 0.7763445780958893 0.6653016082711302 1.0 9.353578079182428 -9.235693974448054 2.214680391805965 0.9241491370750127 0.5845619064483729 0.13816148556214647 0.23419425568406738 0.2547725048884853 2.5784156954624238 0.04709789615170703 0.0433648157651211 5.811737973127039e-10 9.235693974448054 -0.33958723062663976 TDSEEQDKSRDEDNDEDEERLEEEEQNEEEEVDN ddPTM_A549_PD325901_60min_R1 1 TDSEEQDKSRDEDNDEDEERLEEEEQNEEEEVDN 34 3 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 0 58.498000000000005 0.0011386 5915400.0 304.67 263.24 230.1 299.92 466.24 347.41 278.56 181.73 385.96 371.74 233.16 False True 335.5998741138004 285.4241586408603 245.71596970370481 318.4453772322593 433.492910840681 344.58080814341855 289.160753233881 178.10525258557297 369.73944341205424 348.2682729584546 204.48279812301698 1.6412132325766753 1.3958345702465835 1.2016461627050015 1.5573211055175527 2.1199480583197587 1.6851334748271516 1.4141079635457732 0.8710035964904234 1.8081689355092783 1.7031666045030163 1.0 7.67583567300805 -11.018952232173257 1.2419955453062712 0.9933332137438051 1.542178111771587 0.0 0.3693518845236271 0.5185155195518485 1.3952174446597037 0.24628529817632594 0.05282046434115359 9.5729935836867e-12 11.018952232173257 0.5488448980277818 TDSEKPFRGS(ph)QS(ph)PKR ddPTM_A549_PD325901_60min_R1 3 TDSEKPFRGSQSPKR 15 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 T(0.002)DS(0.01)EKPFRGS(0.989)QS(0.999)PKR;T(0.055)DS(0.049)EKPFRGS(0.903)QS(0.993)PKR;T(0.002)DS(0.009)EKPFRGS(0.989)QS(1)PKR 49.224 0.0083623 335389000.0 13223.6 13061.099999999999 13721.4 13247.2 17021.5 13950.0 15052.400000000001 14969.7 15935.0 14555.0 16140.800000000001 True False 14566.050137300193 14161.804734934436 14652.616717481156 14065.449457425935 15825.968560987172 13836.39582510776 15625.227318989328 14671.117589997537 15265.307365455206 13635.994816028166 14155.583924961375 1.0289967700742475 1.000439459792407 1.0351121363240505 0.9936325856981074 1.118001817860746 0.977451435310219 1.1038207538324465 1.0364191027208063 1.0783947484170533 0.9632944065262481 1.0 13.789083641917133 TDSEKPFRGS(ph)QSPKR ddPTM_A549_PD325901_60min_R1 1 TDSEKPFRGSQSPKR 15 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 TDS(0.002)EKPFRGS(0.499)QS(0.499)PKR 40.179 0.018805000000000002 6422300.0 2417.2 2404.9 2523.0 2858.9 2887.6 5227.3 3346.1 3129.3 2998.1 2427.7 3082.6 True False 2662.592364551411 2607.569362997285 2694.225952031494 3035.48775996701 2684.7849376792033 5184.730601905789 3473.4376665561754 3066.8836566116415 2872.1002831735946 2274.4146076861257 2703.4597422114102 0.9848833045220159 0.9645304948629687 0.9965844543435431 1.1228159652505139 0.9930922572137394 1.917813134389313 1.2848120548356783 1.134429194089997 1.0623795273623116 0.8412977534578233 1.0 11.400591157766153 -6.224771497516438 2.8104588961145653 1.1225272372069761 0.9733520657602721 0.0710076992854165 0.2652385289921039 0.754120349857062 11.762231619762956 0.0388373414519564 0.11408495825964168 5.959756314918592e-07 6.224771497516438 -0.149175171446704 TDSEKPFRGSQS(ph)PKR ddPTM_A549_PD325901_60min_R1 1 TDSEKPFRGSQSPKR 15 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 T(0.01)DS(0.004)EKPFRGS(0.19)QS(0.795)PKR 45.093999999999994 0.008285200000000001 4549200.0 1189.0 1210.5 900.95 997.82 1275.3 1974.4 1937.4 1905.2 1449.3 1084.5 2045.3 True False 1309.706404704463 1312.5130832501202 962.0938848524672 1059.45307518636 1185.7273275461578 1958.321141010234 2011.128817185959 1867.1992913995127 1388.3909610765122 1016.0244849180716 1793.741066224938 0.7301535485614085 0.7317182551952172 0.5363616315465563 0.5906388024086765 0.6610359487624429 1.0917524150415239 1.1211923811381146 1.0409525246189368 0.7740197218088364 0.5664276210480986 1.0 10.808755931087305 -7.186835446237535 8.464196018725332 0.9344197544644207 0.644015901648597 0.4495129396007097 0.1555655192071739 0.228181401937983 24.152961173191798 0.02011740704094166 0.03489622322905944 6.503760705325891e-08 7.186835446237535 -0.2904038528158237 TDSLAAT(ph)PPAAK ddPTM_A549_MK2206_60min_R1 1 TDSLAATPPAAK 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.082)DS(0.3)LAAT(0.618)PPAAK 115.57 2.7591e-05 60814000.0 10167.0 11501.0 10456.0 9221.4 14863.0 11065.0 12176.0 13030.0 18021.0 16496.0 17110.0 True False 11882.941040715157 12086.351775257204 11938.81802569367 11480.643413964372 12676.672388897048 12235.89095564745 14388.22159130315 14877.042402701421 13939.272273623586 12769.542143030445 12861.114788023047 0.9239433156899574 0.9397592646099898 0.9282879612280369 0.8926631635895013 0.9856589104314843 0.9513864977740624 1.1187382920104427 1.156745946825365 1.083830795648024 0.9928798827705139 1.0 13.65072807893752 -7.6486805027383875 6.759783783595224 1.056520203281619 0.9354547206302184 0.6431522266651344 0.04910541229576248 0.1347403802548478 7.560356921591106 0.008635996838221634 0.012827742870685244 2.245533286925911e-08 7.6486805027383875 -0.1210654826514006 TDSLAAT(ph)PPAAK ddPTM_A549_PD325901_60min_R1 4 TDSLAATPPAAK 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.139)DS(0.34)LAAT(0.521)PPAAK;T(0.019)DS(0.182)LAAT(0.798)PPAAK;TDS(0.001)LAAT(0.999)PPAAK;TDS(0.004)LAAT(0.996)PPAAK 134.21 1.7879999999999997e-17 211155000.0 45615.0 41261.0 41988.0 42722.0 47815.0 44521.0 40301.0 43721.0 48194.0 49129.0 50754.0 True False 50245.80122001181 44738.20927549212 44837.55817435531 45360.84091129827 44456.63935279506 44158.43573689048 41834.676608553375 42848.950356539004 46168.57377914956 46026.986555592404 44511.57975611427 1.128825386457102 1.005091473288964 1.0073234520101764 1.0190795554738168 0.9987657053822795 0.9920662438592672 0.9398605225375497 0.9626472614837518 1.0372261337861792 1.0340452261587048 1.0 15.441893083796554 -5.261269864995085 24.999999505784665 1.005692433204023 1.1288254206677517 0.6371535372032964 0.027688650877889385 7.524258020040881 1108773.304507447 0.004203098481769381 0.033383214505109046 5.479363785084715e-06 5.261269864995085 0.1231329874637288 TDSLFVLPSRDDAT(ph)PVRDEPMDAESITFK ddPTM_A549_MK2206_60min_R1 3 TDSLFVLPSRDDATPVRDEPMDAESITFK 29 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 T(0.004)DS(0.004)LFVLPS(0.054)RDDAT(0.929)PVRDEPMDAES(0.007)IT(0.002)FK;T(0.002)DS(0.002)LFVLPS(0.011)RDDAT(0.986)PVRDEPMDAESITFK;T(0.003)DS(0.021)LFVLPS(0.019)RDDAT(0.957)PVRDEPMDAESITFK 72.495 3.4624e-05 11669200.0 1879.49 2078.33 1753.95 1787.53 2841.5200000000004 2173.29 2844.21 2284.09 3206.68 2768.0799999999995 3040.44 True False 2196.7019628812573 2184.108119734832 2002.6864839484913 2225.47493024527 2423.5361721387826 2403.266105286854 3360.9661409494356 2607.8667522322567 2480.3721000157193 2142.7688054849464 2285.4148361248876 0.9611830325762432 0.9556725042698027 0.8762901387934516 0.9737728551805279 1.0604360021780952 1.0515666859683963 1.4706153507991728 1.1410911975412363 1.0853049786888571 0.9375841845492656 1.0 11.15824034390616 -6.7315708750851435 2.8637652113691825 1.0852035943360647 0.9322460113830661 0.26641966663627425 0.13024246542186158 0.3300900399279404 5.534914568468368 0.019894296027520585 0.043238789438041964 1.8553639969011286e-07 6.7315708750851435 -0.15295758295299866 TDSLFVLPSRDDAT(ph)PVRDEPMDAESITFK ddPTM_A549_PD325901_60min_R1 2 TDSLFVLPSRDDATPVRDEPMDAESITFK 29 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 T(0.01)DS(0.009)LFVLPS(0.056)RDDAT(0.925)PVRDEPMDAESITFK;T(0.003)DS(0.013)LFVLPS(0.233)RDDAT(0.748)PVRDEPMDAES(0.002)ITFK 64.318 0.00036122 20923000.0 3850.8999999999996 3250.5 3629.2 4118.9 4587.4 5030.4 3795.8 4317.6 3913.1 4535.5 5131.6 True False 4241.840533117252 3524.4310426307425 3875.499336152476 4373.315098299387 4265.196849670859 4989.4340902238055 3940.251246141459 4231.482080908327 3748.6460151718047 4249.127755966726 4500.445731892582 0.9425378697619404 0.7831293282029212 0.8611367777837206 0.9717515461430232 0.947727648273898 1.1086533173516544 0.8755246659722428 0.9402362194752768 0.8329499428483006 0.9441570922309135 1.0 12.135852180181132 -6.185650726851712 7.401658908165911 0.9356277604481826 0.8536063092301979 0.1961349146464053 0.07549511851339757 0.42953589844818385 37.012103399163195 0.011936189131302769 0.031798016065590844 6.521526646992024e-07 6.185650726851712 -0.08202145121798476 TDSPDMHEDT(ph) ddPTM_A549_PD325901_60min_R1 1 TDSPDMHEDT 10 0 Q9BW61 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 1 T(0.052)DS(0.301)PDMHEDT(0.647) 43.246 0.032777 162220000.0 243.13 263.88 375.12 376.65 309.82 190.68 280.2 337.8 424.22 325.72 409.78 True False 267.8123786171538 286.1180936869406 400.5778989798077 399.9148150657857 288.05931202097605 189.1271652997525 290.8631643313233 331.0623140010266 406.3915086647886 305.15398361227716 359.37965780944376 0.7452073950138761 0.7961443767600527 1.114637098330726 1.112792019179436 0.8015459577673583 0.5262600739634369 0.8093478804678187 0.9212049341328272 1.1308138895281385 0.8491131230752103 1.0 8.489364939167904 -8.583560966359078 5.055587301398035 1.0613105323197718 0.8496406726127139 0.09619979324647954 0.16939012337673762 0.2194052539935978 11.374623778689198 0.029415795152889262 0.033529307077720207 2.6087894748423103e-09 8.583560966359078 -0.21166985970705787 TDSREDEIS(ph)PPPPNPVVK ddPTM_A549_MK2206_60min_R1 7 TDSREDEISPPPPNPVVK 18 1 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644 K7EMU2 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed 1 TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;T(0.001)DS(0.003)REDEIS(0.997)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDS(0.016)REDEIS(0.984)PPPPNPVVK;T(0.301)DS(0.303)REDEIS(0.396)PPPPNPVVK 201.64 2.4858999999999997e-49 1601186100.0 44223.869999999995 47612.4 43912.83 42026.96 59305.50000000001 47972.4 42413.94999999999 45946.4 68499.5 68550.2 64264.9 True False 51687.7780861859 50035.66779099694 50140.32960627603 52323.5670866619 50581.7395115208 53048.8075264981 50120.01569993855 52459.44290494864 52984.47262122399 53064.662209818474 48306.1517089902 1.0700040524355483 1.035803226314235 1.0379698616510673 1.0831657094498799 1.047107619258089 1.0981791272896047 1.0375493374399927 1.0859785151377621 1.0968473112993415 1.098507339800009 1.0 15.559919305151249 -4.883981228180117 16.700108958116893 1.0532767852414593 2.518994958392807 0.0 0.03245503087075551 453.8046687438767 67669.53520298837 0.005160758897226163 908.5536520777773 1.3062273469071274e-05 4.883981228180117 1.4657181731513478 TDSREDEIS(ph)PPPPNPVVK ddPTM_A549_PD325901_60min_R1 5 TDSREDEISPPPPNPVVK 18 1 K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644 K7EMU2 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed 1 TDS(0.005)REDEIS(0.995)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(0.999)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDS(0.002)REDEIS(0.998)PPPPNPVVK 205.78 2.4064e-49 2729461300.0 51517.4 56486.59999999999 58684.299999999996 58375.9 65755.8 65115.6 58945.899999999994 60850.299999999996 64468.5 63279.0 67956.1 True False 56747.4085228946 61246.92402173996 62666.96949536339 61981.646761711905 61137.339453195105 64585.320142608405 61189.11848093414 59636.593030363096 61759.113140247755 59283.553140738295 59597.930509210666 0.9521707891203449 1.0276686371228014 1.0514957308069348 1.0399966279388315 1.0258299060190779 1.083683939874841 1.0266987118198267 1.000648722544929 1.036262712691057 0.9947250287755581 1.0 15.8629746146675 -5.260506894038366 24.035718089974466 1.0257679585641608 0.9521707535915065 0.44279592052618644 0.024479832339407516 34.18019136840446 880779.6479698052 0.0034628736868398025 0.02878375750779623 5.488998422414266e-06 5.260506894038366 -0.07359720497265432 TDSS(ph)PNQAR ddPTM_A549_MK2206_60min_R1 1 TDSSPNQAR 9 0 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 T(0.002)DS(0.055)S(0.943)PNQAR 94.801 0.00093782 493600000.0 7322.7 6874.5 5150.3 3522.8 3473.4 2952.0 2071.0 2495.5 3410.7 9527.9 9561.8 True False 8558.592737173687 7224.38268663643 5880.689984480694 4385.886158144501 2962.4674611851556 3264.3786806209905 2447.2738925417893 2849.244767148229 2638.181895768711 7375.540772586067 7187.341167745108 1.1907870431394567 1.0051537165172504 0.8182010352968466 0.6102237330582276 0.4121784943895426 0.4541844618800985 0.3404978051583956 0.396425423623257 0.3670595056219365 1.0261848714912198 1.0 12.811242454001121 -2.234277424171223 10.463189725947473 0.6665719268110427 1.0231851487903019 0.0 0.3067330764570697 0.0 0.0 0.04459863954964797 0.0 0.005830725227784892 2.234277424171223 0.35661322197925915 TDSS(ph)PNQAR ddPTM_A549_PD325901_60min_R1 1 TDSSPNQAR 9 0 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 1 T(0.003)DS(0.089)S(0.908)PNQAR 123.01 0.00010595 791130000.0 6212.5 5768.7 4683.0 4010.7 5052.6 4264.4 2949.4 3478.0 4814.6 6409.3 7148.0 True False 6843.188426599218 6254.84859425441 5000.816541166662 4258.431830039419 4697.722806523732 4229.672140257315 3061.641030973609 3408.6285615617817 4612.259105222504 6004.61570418202 6268.841314905327 1.0916193412534265 0.9977678936269058 0.7977258140633259 0.6793012641609242 0.7493765706517455 0.6747135439846736 0.4883902586103101 0.543741401374627 0.7357434769095219 0.9578509652022835 1.0 12.613983095517765 -5.673105383273967 3.3247994402299605 0.7857580138746157 1.0742573761151377 0.35437906355735693 0.1509384722215997 0.2724613391048734 5.735857619036107 0.02618197014310379 0.12409263800473715 2.122729310836886e-06 5.673105383273967 0.288499362240522 TDSSPNQAR ddPTM_A549_PD325901_60min_R1 1 TDSSPNQAR 9 0 A6NLN1;P26599;P26599-2;P26599-3;K7ES59;A0A087WU68 A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 0 56.258 0.044192 1988800.0 788.02 895.15 551.45 686.25 735.84 473.35 453.68 537.14 583.82 977.49 1231.5 False True 868.0192102903372 970.5874320291988 588.8747131382354 728.6381039131697 684.1571369101902 469.49519453869254 470.9450406632219 526.426321321822 559.284075688739 915.7711145805131 1080.0333071216999 0.8036967050614555 0.8986643519502417 0.5452375489304054 0.6746441050554246 0.6334592946336777 0.4347043664698658 0.4360467751853833 0.48741674710454413 0.5178396555002891 0.8479100677191639 1.0 10.076860088975236 -10.758892366389206 1.0205158187220966 0.9988489441611086 0.5974329818886988 0.40668207842108584 0.1456832458195724 0.36471728525469477 0.6775325304246724 0.10431869065597767 0.026878342801162493 1.7422386085495505e-11 10.758892366389206 -0.40141596227240983 TDST(ph)SDGRPAWMR ddPTM_A549_MK2206_60min_R1 2 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y6I5;A0A2R8Y542;A0A2R8Y5T0;A0A2R8Y706 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.043)DS(0.253)T(0.352)S(0.352)DGRPAWMR;TDS(0.026)T(0.936)S(0.037)DGRPAWMR 110.8 0.00019105 249315000.0 6490.1 7276.200000000001 5208.4 5690.0 8810.8 6509.0 5726.7 6387.200000000001 9571.7 10024.5 10414.7 True False 7585.470212289313 7646.527500837011 5947.029438123847 7084.050255433802 7514.742991596183 7197.77805967548 6767.167262394528 7292.60515997963 7403.725232864042 7759.958487682382 7828.442558902615 0.9689628754653133 0.976762292538159 0.7596695502812116 0.9049118266030732 0.9599282277482271 0.9194393400115155 0.8644334056840987 0.9315524901803587 0.9457468937348746 0.9912518906915461 1.0 12.934509601624057 -9.50054549985105 0.6480992415305917 0.9950462724780368 0.9059563593858099 0.24250367823208197 0.05722291276998373 0.6627532502237978 0.6112069704411563 0.024261052613855395 0.014342018849441454 3.158308143740073e-10 9.50054549985105 -0.08908991309222691 TDST(ph)SDGRPAWMR ddPTM_A549_PD325901_60min_R1 6 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y6I5;A0A2R8Y542;A0A2R8Y5T0;A0A2R8Y706 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.022)DS(0.445)T(0.455)S(0.078)DGRPAWMR;TDS(0.139)T(0.662)S(0.198)DGRPAWMR;T(0.001)DS(0.15)T(0.76)S(0.089)DGRPAWMR;T(0.004)DS(0.196)T(0.58)S(0.221)DGRPAWMR;TDS(0.006)T(0.921)S(0.073)DGRPAWMR;T(0.001)DS(0.102)T(0.746)S(0.151)DGRPAWMR 229.03 9.6364e-46 517240300.0 30338.9 28595.890000000003 28373.1 29988.2 28585.190000000002 30821.6 28253.2 27351.1 36279.100000000006 36401.3 43283.200000000004 True False 33418.882793682285 31005.766007584676 30298.669187310654 31840.503005856357 26577.464867951985 30570.599108468927 29328.390986744267 26805.560853977127 34754.41559096865 34102.915705715284 37959.640794811145 0.8803793211407429 0.8168087304931236 0.7981811353560622 0.8387988489661568 0.7001505891906376 0.8053447943229153 0.7726203507898652 0.7061594971057072 0.9155622883480861 0.8983993260119824 1.0 15.21217872001183 -8.954958611634133 4.184637745326769 0.9647487927880316 0.7896349625565411 0.585856513860469 0.055154449055918105 0.08838229880166994 3.0695588417377215 0.00991062162041057 0.010259894374946028 1.1092805249191378e-09 8.954958611634133 -0.17511383023149052 TDSTESSGTQS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TDSTESSGTQSPK 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDSTESSGT(0.001)QS(0.999)PK;TDSTESSGT(0.003)QS(0.997)PK 109.44 6.322399999999999e-05 32906000.0 4144.8 4112.8 3502.1 3346.8 3257.1000000000004 2576.6000000000004 2633.2 2567.0 3029.5 5034.5 5139.9 True False 4844.340909369156 4322.123952810868 3998.750440683032 4166.766150243562 2777.9849046542786 2849.254101791344 3111.6183553071173 2930.8801111077937 2343.323087117397 3897.2029533878954 3863.520975976604 1.2538668586223023 1.11870078606687 1.035001612660391 1.0784893303679568 0.7190293315159423 0.7374760275686408 0.8053840977323997 0.7586033903612853 0.6065252658619413 1.0087179486330542 1.0 11.915700515372043 -6.691977388584234 5.775650396019755 0.7939789723835639 1.1202108379532716 0.614317583580516 0.12058579956590805 0.1296771068276187 7.818419953115908 0.02143575795977946 0.04485251661297994 2.0324628277669632e-07 6.691977388584234 0.32623186556970774 TDSTESSGTQS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TDSTESSGTQSPK 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDSTESSGT(0.001)QS(0.999)PK;TDSTES(0.001)S(0.007)GT(0.004)QS(0.988)PK 129.04 4.874e-08 42455000.0 10912.2 9983.3 10405.4 10370.8 13401.3 10916.5 11871.2 11757.8 10374.6 12598.3 12611.7 True False 12019.998510862939 10824.627727394392 11111.573016753278 11011.380762204304 12460.038919975159 10827.599643354035 12322.965012169901 11523.281455184342 9938.59164064333 11802.841187960665 11060.540852153266 1.0867459983679628 0.9786707424245943 1.0046138941379235 0.995555362924283 1.1265307082654497 0.9789394377803973 1.1141376517560502 1.0418370682967995 0.8985628979172826 1.0671124808207626 1.0 13.433134313552575 -8.737993790321632 24.818758397751406 0.9520991478247488 1.0393180380901992 0.042484958108685134 0.06345484719543994 182.66764130781726 193366.11220451005 0.009699309566559866 0.010994598385658489 1.828126355078413e-09 8.737993790321632 0.08721889026545038 TDSTESSGTQS(ph)PKR ddPTM_A549_MK2206_60min_R1 2 TDSTESSGTQSPKR 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDSTESSGTQS(1)PKR;TDSTESSGT(0.001)QS(0.999)PKR 218.63 3.0835000000000005e-39 82544000.0 6134.8 7631.599999999999 7151.3 6110.3 9092.0 7459.6 7469.0 6019.4 9462.1 10217.5 11651.1 True False 7170.204258540311 8020.015842800877 8165.461873292193 7607.323774301793 7754.578844099575 8248.969920718277 8826.020619698029 6872.668383639371 7318.949457868802 7909.35965363806 8757.810315998564 0.8187211186159111 0.9157558286173542 0.9323634080514072 0.8686330829071407 0.8854472253108395 0.9418986736501076 1.007788511196099 0.78474734387482 0.8357054096614441 0.9031206852230432 1.0 13.096354487691778 -10.96678466524114 1.2677009946562225 0.9992607182057233 0.8860978845491163 0.059240823840388535 0.06532382794764462 0.437813127760754 1.264481280571647 0.041983181650677756 0.009992425643351826 1.079481825369128e-11 10.96678466524114 -0.11316283365660695 TDSTESSGTQS(ph)PKR ddPTM_A549_PD325901_60min_R1 2 TDSTESSGTQSPKR 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDSTESSGTQS(1)PKR;TDSTESSGT(0.003)QS(0.997)PKR 173.37 4.5868e-23 111680000.0 11939.1 11349.8 11385.2 11666.5 15113.3 12654.099999999999 12577.7 13362.900000000001 13391.8 11589.900000000001 13582.6 True False 13151.148642899112 12306.287478126564 12157.868136769308 12387.113208456105 14051.793946054542 12551.049205053485 13056.35125628153 13096.366476507756 12828.989217238965 10858.111736055294 11912.026307195449 1.1040228004663801 1.0330977417916682 1.0206381201009738 1.0398829627310076 1.1796308691466344 1.0536451886000315 1.0960646761160067 1.099423904780743 1.0769779117671714 0.9115251642364542 1.0 13.540131224715285 -10.50899234571546 0.843908035545032 1.0003713161717613 1.0771130345692095 0.4133292306844816 0.05036991184844588 0.5924478846425022 0.7636948676145787 0.027513058156633984 0.008016363892466842 3.09747389060231e-11 10.50899234571546 0.07674171839744814 TDSTS(ph)DGRPAWMR ddPTM_A549_MK2206_60min_R1 1 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y6I5;A0A2R8Y542;A0A2R8Y5T0;A0A2R8Y706 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.001)DS(0.08)T(0.418)S(0.501)DGRPAWMR 66.023 0.0032601999999999996 21672000.0 3547.2 3634.3 2914.8 2407.2 4490.6 3211.2 3518.8 3622.4 4297.8 4600.9 5076.4 True False 4145.8806392864 3819.270346649616 3328.1624695191194 2996.9641080633137 3830.038688661851 3551.0070525779565 4158.120411915038 4135.886293134741 3324.3551621763168 3561.5534945361737 3815.789778487449 1.0865065635061784 1.0009121488248094 0.8722080257886687 0.7854112207542231 1.003734196850868 0.9306086704770067 1.0897142278009053 1.083887355758413 0.8712102487716361 0.9333725653901058 1.0 11.897765976475146 -5.421936705266451 3.909607753236371 0.9475840619505539 1.0820183355503148 0.16750312868982287 0.08705777170454711 0.3315597676603781 8.324680211618487 0.012790570786480236 0.09047976523979362 3.784977435301803e-06 5.421936705266451 0.1344342735997609 TDSTS(ph)DGRPAWMR ddPTM_A549_PD325901_60min_R1 4 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y6I5;A0A2R8Y542;A0A2R8Y5T0;A0A2R8Y706 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 TDS(0.013)T(0.083)S(0.904)DGRPAWMR;TDS(0.007)T(0.044)S(0.949)DGRPAWMR;T(0.05)DS(0.299)T(0.299)S(0.353)DGRPAWMR;T(0.003)DS(0.128)T(0.343)S(0.527)DGRPAWMR 172.09 2.7193e-22 527007000.0 21690.5 19385.3 18895.0 19398.399999999998 20291.9 21792.4 20473.4 20635.4 25708.399999999994 28797.6 30314.299999999996 True False 23892.50359229785 21018.96726371626 20177.328324865284 20596.595111037135 18866.666947254686 21614.9299196472 21252.526440474354 20223.810758841868 24627.96535136922 26979.31462137085 26585.833278180526 0.8986930498773141 0.790607803930182 0.7589503820978665 0.7747206903588436 0.7096511420140026 0.8130243537405676 0.799392902908057 0.7606987731860906 0.9263567214040207 1.0148004141556572 1.0 14.698370064983136 -8.910051762673568 2.7093194725778544 0.9709796358167186 0.7849694230496296 0.7617765058763429 0.0479078426181909 0.09240139499704417 1.314846658201312 0.008964178534143037 0.009293858880475679 1.2301221463247935e-09 8.910051762673568 -0.18601021276708907 TDSVIIADQTPT(ph)PTR ddPTM_A549_MK2206_60min_R1 2 TDSVIIADQTPTPTR 15 0 K7ELQ4;P17544-4;P17544-2;P17544;K7ESA4;P17544-5;P17544-3;P17544-1 K7ELQ4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 TDSVIIADQT(0.041)PT(0.958)PT(0.001)R;TDSVIIADQT(0.152)PT(0.696)PT(0.152)R 252.25 1.3195999999999997e-76 21036000.0 3475.0 4840.6 4198.4 4288.8 6270.8 4236.2 4294.9 4093.1 6482.5 5688.1 5426.3 True False 4061.495044406922 5086.965864125729 4793.796250867668 5339.556192531551 5348.37362687853 4684.471872238022 5075.2277359139225 4673.309459593035 5014.22410042533 4403.154259442982 4078.7999517387216 0.9957573532567041 1.24717218895652 1.1752957506102146 1.309099797908792 1.3112615696189294 1.1484926761953875 1.2442943502905655 1.145755985801874 1.2293380797672742 1.0795219945920598 1.0 11.993929035305174 -10.779780761213967 0.7218679039616108 0.9789427836602106 1.208985894978663 0.3204131617082516 0.08710203940415032 0.62415021533029 0.4893653328674797 0.08819355476778376 0.015651214254742182 1.6604249048957638e-11 10.779780761213967 0.23004311131845234 TDSVIIADQTPT(ph)PTR ddPTM_A549_PD325901_60min_R1 2 TDSVIIADQTPTPTR 15 0 K7ELQ4;P17544-4;P17544-2;P17544;K7ESA4;P17544-5;P17544-3;P17544-1 K7ELQ4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 TDSVIIADQT(0.003)PT(0.951)PT(0.046)R;TDSVIIADQT(0.002)PT(0.994)PT(0.005)R 235.46 2.4714999999999995e-64 72196000.0 19458.1 20401.2 19765.5 22704.4 25258.0 23381.5 21639.4 22325.3 21461.2 21485.2 22330.4 True False 21433.471987703873 22120.480722017623 21106.90568960701 24106.79922256638 23483.9652153696 23191.08881611162 22462.899208534047 21880.004377640966 20559.26039733337 20128.620805312832 19583.902364068537 1.09444336421064 1.1295236419582575 1.0777681228810043 1.2309497246471268 1.1991463590247817 1.1841914029688663 1.1470083332190082 1.1172443556390064 1.049804069440949 1.027814601559887 1.0 14.257380650126002 -8.795103770226472 1.4216487414797503 1.0169877248067165 1.1551009637999554 0.6326033856995459 0.04224542581945154 0.17310825367113253 0.6896461095264479 0.009115102297743937 0.009618908944543567 1.6028623573573732e-09 8.795103770226472 0.1381132389932389 TDSVKT(ph)PESEGNPLLEQLEK ddPTM_A549_MK2206_60min_R1 2 TDSVKTPESEGNPLLEQLEK 20 1 Q8WYK2;Q8WYK2-2 Q8WYK2 JDP2 Jun dimerization protein 2 1 T(0.002)DS(0.009)VKT(0.964)PES(0.025)EGNPLLEQLEK;T(0.043)DS(0.043)VKT(0.914)PES(0.001)EGNPLLEQLEK 150.94 8.2256e-22 20334900.0 5572.200000000001 6690.1 6242.1 6054.5 8342.1 6547.5 5800.8 6663.6 8733.400000000001 8570.3 7750.5 True False 6512.651132789712 7030.5975142725165 7127.323641754252 7537.852771796829 7114.988140713047 7240.3521041212525 6854.730273228588 7608.185706419128 6755.298844374019 6634.2632776681485 5825.836947081982 1.117891075899702 1.2067961355825398 1.223399093811603 1.2938660728519624 1.221281715458372 1.242800334078654 1.1766086719371633 1.3059386617797262 1.1595413510083872 1.1387656980326386 1.0 12.508249608706763 -9.919393202786802 0.7218245782283123 1.0093128832380887 1.22502995303887 0.39773032326693925 0.06383486919829652 0.24273553427527314 0.2588037703886128 0.025038653016067933 0.011301111621747411 1.203945415213022e-10 9.919393202786802 0.2157170698007813 TDSVKT(ph)PESEGNPLLEQLEK ddPTM_A549_PD325901_60min_R1 1 TDSVKTPESEGNPLLEQLEK 20 1 Q8WYK2;Q8WYK2-2 Q8WYK2 JDP2 Jun dimerization protein 2 1 TDS(0.013)VKT(0.781)PES(0.206)EGNPLLEQLEK 120.0 9.4752e-15 16373000.0 1472.8 1411.3 1420.6 1786.2 2002.3 1872.0 1777.5 1780.3 1268.4 1618.8 1734.3 True False 1622.3175717819447 1530.2352039577816 1517.0104587617693 1896.5295172454717 1861.665355560004 1856.7550526596222 1845.1437351853222 1744.790519881668 1215.0935589798162 1516.5886917338632 1520.9920946335076 1.0666180169548167 1.0060770265387218 0.997382211330495 1.246902941795008 1.2239809543576778 1.2207525990508312 1.2131185570888328 1.1471397688638783 0.7988822317137687 0.9971049140129125 1.0 10.570796939326947 -8.745478174288303 24.85148655645599 0.9050277256194703 1.1424710627866321 0.473208404500695 0.09670168477367178 140.24874836912988 218366.18743825358 0.01933563237328019 0.021889661911524128 1.796891381684164e-09 8.745478174288303 0.23744333716716182 TDT(ph)EEEEEQQQQQK ddPTM_A549_MK2206_60min_R1 1 TDTEEEEEQQQQQK 14 0 Q9UGU0-2;Q9UGU0;A9JX13 Q9UGU0-2 TCF20 Transcription factor 20 1 T(0.09)DT(0.91)EEEEEQQQQQK 72.958 0.0012490000000000001 1135000.0 305.73 339.57 272.32 376.44 487.36 217.7 339.77 144.16 806.31 550.62 580.91 True False 357.32974961914493 356.85266257926173 310.9390708451512 468.6678168990339 415.669989601888 240.73686950243552 401.5018109458828 164.59512147148408 623.6820724124871 426.23455957780175 436.65401469961836 0.8183361141542649 0.8172435167571898 0.7120948402571117 1.073316175099039 0.9519435883071735 0.551321782001804 0.9194964375217818 0.3769463143141185 1.42832093927163 0.9761379610147766 1.0 8.770346794494756 -8.778371712801148 24.999521100367595 1.2022626487838841 0.7895836804861516 0.3445499161215225 0.21352504460043448 170.39333507996045 251574.04622325092 0.03909239165510555 0.04166890510557166 1.6658208255799384e-09 8.778371712801148 -0.41267896829773254 TDT(ph)EEEEEQQQQQK ddPTM_A549_PD325901_60min_R1 1 TDTEEEEEQQQQQK 14 0 Q9UGU0-2;Q9UGU0;A9JX13 Q9UGU0-2 TCF20 Transcription factor 20 1 T(0.016)DT(0.984)EEEEEQQQQQK 108.59 1.5803e-05 1717900.0 391.94 603.66 782.62 593.34 549.68 780.6 564.7 764.46 1066.3 651.5 874.13 True False 431.729460269022 654.5325467449544 835.7332994763728 629.98926422709 511.0723730930545 774.2430524071048 586.1899675156967 749.2122455927313 1021.4871191581351 610.3641788143144 766.6175515666193 0.5631614608702376 0.8537928011266975 1.0901567512621022 0.8217777729451629 0.6666588470987311 1.0099469426768306 0.7646445953628243 0.9772959724985171 1.3324598648578783 0.7961781954600521 1.0 9.582363218526583 -8.537162022873375 7.157098545016631 1.157254172371326 0.8387659976741937 0.14568779181802693 0.18828277477178917 0.10974529858422709 28.015739319351166 0.02934481982728491 0.033696073538735424 2.9029394485824905e-09 8.537162022873375 -0.3184881746971324 TDT(ph)FRVK ddPTM_A549_MK2206_60min_R1 4 TDTFRVK 7 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL4;H0YA73;H0Y9Y7 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.024)DT(0.976)FRVK;T(0.001)DT(0.999)FRVK;T(0.133)DT(0.867)FRVK;T(0.141)DT(0.859)FRVK 87.30799999999999 0.005118999999999999 48631000.0 13093.0 14310.5 14665.0 12908.95 16948.6 13746.9 11078.7 11739.16 21821.300000000003 21697.100000000002 21792.4 True False 15302.778306883405 15038.843324912457 16744.717515952336 16071.643329504788 14455.483391674654 15201.587833546297 13091.556384984406 13403.221879669722 16878.81039145565 16795.710040709608 16380.745640357314 0.934193024106417 0.9180805108078349 1.0222194937633549 0.9811301440337985 0.8824679724017335 0.9280156207354858 0.7992039356701005 0.8182302670427984 1.0304054993608625 1.0253324488068445 1.0 13.99971340851629 -8.797046730347425 24.999879956437766 1.0143581840960953 0.9127246232433456 0.3843903073562501 0.06083328004370821 146.73437402349572 103021.36376470915 0.011449253280963724 0.012188867164218117 1.5957074389188985e-09 8.797046730347425 -0.10163356085274977 TDT(ph)FRVK ddPTM_A549_PD325901_60min_R1 3 TDTFRVK 7 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL4;H0YA73;H0Y9Y7 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.154)DT(0.846)FRVK;T(0.2)DT(0.8)FRVK;T(0.001)DT(0.999)FRVK 93.649 0.0048004 88772000.0 8039.400000000001 7789.400000000001 9431.4 9600.3 9728.0 9132.5 9653.3 10553.4 10320.8 11319.599999999999 11081.900000000001 True False 8855.553969706525 8445.840074901678 10071.471519615472 10193.28872713677 9044.73883977811 9058.127947870727 10020.661613988445 10342.90415801786 9887.052667548787 10604.878524184975 9718.896553952063 0.9111686620540815 0.8690122410519213 1.0362772629285821 1.0488113203542435 0.9306343358598858 0.9320119725101259 1.031049312888681 1.0642056020044839 1.0173019758635404 1.0911607573261635 1.0 13.246576809757652 -7.76733141742476 24.976997545657156 1.015031954100108 0.9576582965448632 0.32756297861659533 0.05608319241103314 173.47773681381238 735391.7600045556 0.008432603145199249 0.011820908726622297 1.7087108714225438e-08 7.76733141742476 -0.05737365755524482 TDTAVQATGS(ph)VPSTPIAHR ddPTM_A549_MK2206_60min_R1 2 TDTAVQATGSVPSTPIAHR 19 0 I3L533;I3L2R9;Q9NXR1;Q9NXR1-1;I3L2R3;I3L522 I3L533 NDE1 Nuclear distribution protein nudE homolog 1 1 TDTAVQAT(0.017)GS(0.982)VPS(0.001)TPIAHR;TDTAVQAT(0.01)GS(0.99)VPSTPIAHR 125.77 2.3519000000000002e-15 8241400.0 2422.3 2520.5 2471.1 1947.94 2739.2 2529.8 2599.3 2284.58 4120.9 3252.8 3965.8999999999996 True False 2831.125020450903 2648.7826840740613 2821.5391376522207 2425.1853874463504 2336.267308596299 2797.5017568546687 3071.5591641158253 2608.4262112328197 3187.5227297250644 2517.9902208322865 2981.057576728265 0.94970491095247 0.8885379151184064 0.9464893129467439 0.8135318842476069 0.7837041883506226 0.9384259394026699 1.030358886085953 0.8750002789599216 1.0692590289461623 0.8446633974764759 1.0 11.541608524754054 -8.008273953563709 1.1959869858890801 1.0278642577651842 0.8803104764945292 0.0 0.08739602986894628 0.29656538411373184 0.8461107282106384 0.012767312793255424 0.018682390106051855 9.811288503337578e-09 8.008273953563709 -0.147553781270655 TDTGEPMGR ddPTM_A549_MK2206_60min_R1 1 TDTGEPMGR 9 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 54.611000000000004 0.0081378 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TDTGEPMGR ddPTM_A549_PD325901_60min_R1 1 TDTGEPMGR 9 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 54.611000000000004 0.011773 5506700.0 2032.6 2242.2 1778.7 1612.6 1828.6 2121.1 1735.3 1921.6 2072.5 2098.1 2462.8 False True 2238.948055678967 2431.1580630015856 1899.4132781920016 1712.2066395196773 1700.1654443275354 2103.8264648484637 1801.337791092595 1883.2721805339618 1985.400032312889 1965.625607936014 2159.891212975496 1.0366022335886822 1.1255928300446154 0.8794022896992778 0.792728184287077 0.7871532761066073 0.9740427907710238 0.8339946846725892 0.8719291829237733 0.9192129772025761 0.9100576900019612 1.0 11.076742934804 -5.762197681771976 24.99998839418839 0.9203905459373531 1.081097556617937 0.46751787455229044 0.0731292196527281 15.925923177657335 525152.9215566354 0.01198020950888918 0.04075616020843653 1.7290291621307065e-06 5.762197681771976 0.1607070106805839 TDTGIVTVEQS(ph)PSSSK ddPTM_A549_MK2206_60min_R1 2 TDTGIVTVEQSPSSSK 16 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TDTGIVTVEQS(0.972)PS(0.025)S(0.002)S(0.001)K;TDTGIVTVEQS(0.998)PS(0.002)SSK 244.36 1.1677999999999997e-65 37723000.0 5990.1 6673.6 6420.8 6393.799999999999 9476.0 6221.8 6589.700000000001 6505.9 9761.8 8452.3 10374.9 True False 7001.0824361156565 7013.257734749712 7331.365988846015 7960.28128702859 8082.092952781292 6880.186746303414 7786.963191541592 7428.13124848313 7550.767886391359 6542.919559622705 7798.525997326733 0.8977443222623822 0.8993055530178133 0.9400963709499902 1.020741777325267 1.036361609303061 0.882241945293493 0.9985173088107798 0.9525045182935119 0.9682301359230829 0.8389943896917905 1.0 12.928985750008373 -5.97002382538021 3.963819147921089 0.9816486941053695 0.8999734936857984 0.08640244840473799 0.05759948657538503 0.15021235828680685 5.211004607113838 0.005189237964150126 0.016994106429113316 1.0714605233380975e-06 5.97002382538021 -0.0816752004195711 TDTGIVTVEQS(ph)PSSSK ddPTM_A549_PD325901_60min_R1 2 TDTGIVTVEQSPSSSK 16 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TDTGIVTVEQS(0.972)PS(0.024)S(0.002)S(0.001)K;TDTGIVTVEQS(0.999)PSSSK 251.28 2.3294999999999995e-77 61726000.0 8077.5 8373.7 9377.2 8797.900000000001 9362.0 9584.5 9388.3 9759.1 8288.1 10178.0 10280.2 True False 8897.52185365878 9079.381086502706 10013.593181684406 9341.326301519386 8704.445417146653 9506.447009730846 9745.576893974883 9564.447094634159 7939.779979644132 9535.35934301165 9015.800571557043 0.9868809522837708 1.0070521208228858 1.1106715484895693 1.0361061369291273 0.9654656120730254 1.054420728839288 1.0809441509520663 1.0608538885396357 0.8806516866280816 1.0576275803053703 1.0 13.138239888281388 -8.745471719604058 24.999991670513985 0.9436410703910121 1.0387281988299497 0.08857331574040672 0.05791573741531176 187.70208594394612 293878.2781659414 0.009659977323808749 0.010936285578854354 1.7969180881084106e-09 8.745471719604058 0.09508712843893763 TDTNS(ph)SPSR ddPTM_A549_MK2206_60min_R1 1 TDTNSSPSR 9 0 Q8WVS4;H7C022 Q8WVS4 WDR60 WD repeat-containing protein 60 1 T(0.014)DT(0.071)NS(0.449)S(0.449)PS(0.018)R 58.37 0.011534 4056900.0 473.67 266.43 273.52 251.74 342.37 503.74 390.24 304.86 515.14 636.84 683.23 True False 553.6139158803528 279.99014898545994 312.30924888941587 313.41631130103815 292.0078265347967 557.0454324444505 461.14155665162133 348.0748385945938 398.4616125095415 492.9774016954113 513.5651348112791 1.0779818923724067 0.5451891688253887 0.6081200372065382 0.6102756788897088 0.5685896622287288 1.0846636476776197 0.8979222408099764 0.6777618163711632 0.7758735659810027 0.9599121285298442 1.0 9.004403453095104 -7.244088619422438 24.907191245026944 0.885884409156024 0.6663363451393758 0.28728942054465223 0.1688983171761458 822.4835613238411 1180683.572772107 0.0253060526992176 0.04376367910411144 5.700479399859935e-08 7.244088619422438 -0.21954806401664817 TDTNSS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 TDTNSSPSR 9 0 Q8WVS4;H7C022 Q8WVS4 WDR60 WD repeat-containing protein 60 1 T(0.001)DT(0.004)NS(0.385)S(0.609)PS(0.001)R 64.297 0.0063377 6016400.0 435.98 500.33 378.23 339.67 394.29 356.85 365.21 461.07 327.99 386.66 461.45 True False 480.24036864848756 542.4945650082879 403.8989622817567 360.65064445345934 366.59643062665623 353.9439319132403 379.1082664005802 451.87359714758225 314.20572091594903 362.2462216121916 404.6945753725606 1.1866735999769202 1.3405036736874196 0.9980340406340474 0.8911674788856397 0.905859512174505 0.8745951970999378 0.9367762492283823 1.1165793283282552 0.7764021067658052 0.8951101488788399 1.0 8.660689700666033 -5.887587137913668 4.5690600356130915 0.9113911907028535 1.261224599941067 0.683395078591613 0.08737651016716945 0.09392137920468509 3.302051388580396 0.014094429568799745 0.04705514539987555 1.2954267538280273e-06 5.887587137913668 0.3498334092382135 TDTPPSSVPTSVISTPSTEEIQSETPGDAQGS(ph)PPELKRPR ddPTM_A549_MK2206_60min_R1 1 TDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPPELKRPR 40 2 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TDTPPSSVPTSVIS(0.002)T(0.002)PS(0.009)T(0.009)EEIQS(0.273)ET(0.243)PGDAQGS(0.462)PPELKRPR 74.67699999999999 1.5346e-06 10205000.0 1103.6 1300.8 838.22 831.01 1454.3 1483.3 1053.8 1239.6 1799.7 940.97 1743.1 True False 1289.860699570497 1367.0051638339764 957.0922002196772 1034.6074873054565 1240.3743964995608 1640.2618214651477 1245.261819391857 1415.317096115785 1392.070823530346 728.4042234679531 1310.240162887374 0.9844460092934666 1.0433241191611082 0.7304708154499971 0.7896319442883614 0.9466771296081703 1.2518787531672861 0.9504073029235156 1.080196696914597 1.062454703313812 0.5559318391391468 1.0 10.355615562111964 -7.007840601869045 24.92207828843105 1.0440158564208608 0.8846076527816198 0.0009552420399493444 0.18133824671166562 320.72766323716866 1019467.7818309215 0.015284194172362995 0.027992147621034188 9.821083379019974e-08 7.007840601869045 -0.15940820363924102 TDTS(ph)PVLETAGTVAAMAATPSAR ddPTM_A549_MK2206_60min_R1 2 TDTSPVLETAGTVAAMAATPSAR 23 0 Q8WWH5 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 1 T(0.004)DT(0.149)S(0.847)PVLETAGTVAAMAATPSAR;T(0.047)DT(0.308)S(0.643)PVLET(0.002)AGTVAAMAATPSAR 119.87 2.3079999999999996e-15 6576600.0 2391.84 3268.0 2809.4 2510.15 4877.9 3427.5 3446.8999999999996 3421.63 5102.3 4811.9 5238.5 True False 2795.5241171264033 3434.3272412434153 3207.8151646311962 3125.1368626849144 4160.367371715059 3790.1957750096353 4073.157112603714 3906.656530802401 3946.6371966988304 3724.8884479903086 3937.6358747550407 0.7099498800915186 0.8721799959365374 0.8146551043983349 0.7936581649717239 1.056564777456441 0.9625561874091322 1.03441690449783 0.992132501597912 1.002285971133466 0.9459707719221329 1.0 11.943113991642166 -6.753841273801051 24.999905613972274 1.0032166202907613 0.8041545651173266 0.8201444106839555 0.04533346305464177 43.54007542229769 143257.87559289407 0.005245296641474417 0.010757713074629489 1.7626201321314987e-07 6.753841273801051 -0.19906205517343467 TDVHY(ph)R ddPTM_A549_PD325901_60min_R1 1 TDVHYR 6 0 Q9NZM1-5;Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;O75923-11;O75923-14;O75923-7;O75923-8;O75923-2;O75923-10;O75923-4;O75923-6;O75923-5;O75923-12;O75923;O75923-9;O75923-3;O75923-15;O75923-13 Q9NZM1-5 MYOF;DYSF Myoferlin;Dysferlin 1 TDVHY(1)R 50.038999999999994 0.030139 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TDVIQGDDVADATSEVEVSSTSETT(ph)PK ddPTM_A549_MK2206_60min_R1 1 TDVIQGDDVADATSEVEVSSTSETTPK 27 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 TDVIQGDDVADATSEVEVSSTS(0.002)ET(0.197)T(0.801)PK 118.22 1.7551e-17 5386400.0 790.49 837.3 840.29 579.25 839.96 1101.5 587.26 744.05 903.25 900.92 997.23 True False 923.9053863750294 879.9149936025436 959.4557573460339 721.1662760035204 716.4029966882839 1218.0599988834758 693.957540383434 849.5213660575595 698.6653171938567 697.401546283886 749.5902688521467 1.2325471991382877 1.17386128151045 1.2799736031995932 0.9620806272043096 0.9557261165960936 1.624967731703215 0.9257824830705133 1.1333142936319571 0.932062949888248 0.9303770009605679 1.0 9.549958413889918 TDVKDDLSDPPVAS(ph)SCISEKSPR ddPTM_A549_MK2206_60min_R1 1 TDVKDDLSDPPVASSCISEKSPR 23 2 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 TDVKDDLS(0.001)DPPVAS(0.352)S(0.352)CIS(0.062)EKS(0.233)PR 57.803000000000004 0.00059918 5923300.0 2472.0 2489.5 2042.0 2217.4 2810.7 2777.6 2137.1 2707.7 3607.5 3078.8 3203.0 True False 2889.2131654025648 2616.204916485767 2331.5863053238795 2760.663099542868 2397.2497533117753 3071.523788378341 2525.383406929529 3091.524766983473 2790.4070099937317 2383.2969416805363 2407.606701697126 1.2000353560097476 1.0866413167240314 0.9684249107964106 1.1466420564442157 0.9956982390944293 1.2757581153986732 1.0489185817390283 1.2840655264849745 1.1589961965244444 0.989902935558597 1.0 11.233384022335429 -3.950036862687987 2.486360371176476 1.094176033267299 45.842535355519985 0.07280149079787157 0.10598322911693765 1617.9002317218835 27.320088709097536 0.01450104212630217 410576.09921024577 0.00011219232220053626 3.950036862687987 44.74835932225269 TDVKDDLSDPPVAS(ph)SCISEKSPR ddPTM_A549_PD325901_60min_R1 1 TDVKDDLSDPPVASSCISEKSPR 23 2 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 TDVKDDLS(0.004)DPPVAS(0.292)S(0.292)CIS(0.242)EKS(0.169)PR 63.49100000000001 0.00015801 11285000.0 3806.6 3589.4 4506.0 3131.0 5156.8 3657.5 3825.6 4170.8 4073.4 4172.8 4704.8 True False 4193.043229729191 3891.8913350003936 4811.804256779199 3324.3947589830764 4794.60415799422 3627.714532640259 3971.1853014486474 4087.6101220706964 3902.209163630074 3909.3286958654976 4126.13942618447 1.016214625012463 0.943228265700975 1.1661758752609042 0.8056913292571928 1.1620073058044706 0.8792030898468415 0.962445737109007 0.9906621419845227 0.9457288667626365 0.9474543373539217 1.0 12.010576856750845 -6.240974174753193 24.986737197736183 0.971740464077154 1.0320084085965913 0.11355285191125297 0.09581168932357437 1600.0117433472556 1953512.4897506793 0.01159251197402228 0.030631646099401107 5.74150602959266e-07 6.240974174753193 0.06026794451943729 TDVKDDLSDPPVASSCISEKS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TDVKDDLSDPPVASSCISEKSPR 23 2 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 TDVKDDLS(0.019)DPPVAS(0.211)S(0.211)CIS(0.07)EKS(0.49)PR 58.398 0.00048776 7373600.0 2870.4 2979.6 2943.9 2522.6 3574.7 3087.1 2697.9 3195.6 4987.2 3931.1 3705.8 True False 3354.853345457736 3131.248913099413 3361.3892870925415 3140.637113243817 3048.8663653764565 3413.7748729488667 3188.0735078167527 3648.586086114558 3857.607162921899 3043.061779732476 2785.5475851230744 1.2043784006330331 1.1241053392240163 1.2067247765017177 1.1274756640371857 1.0945303471603585 1.225530983990724 1.144505132435529 1.3098272331087648 1.3848649305165102 1.0924465250512043 1.0 11.443745246226385 -7.287966279523123 23.990106791497695 1.196281061289575 1.1516638146417792 0.039616091227521855 0.10077882743991802 1914.4815480010964 1731394.1659305713 0.021796033072798565 0.034851509049899136 5.152686506855035e-08 7.287966279523123 -0.04461724664779565 TDVKDDLSDPPVASSCISEKS(ph)PR ddPTM_A549_PD325901_60min_R1 1 TDVKDDLSDPPVASSCISEKSPR 23 2 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 TDVKDDLS(0.001)DPPVAS(0.026)S(0.029)CIS(0.218)EKS(0.725)PR 82.492 8.557000000000001e-06 8953900.0 3603.4 3708.6 4300.2 3580.1 4291.0 4106.7 3682.5 4730.9 4017.9 4779.4 4370.8 True False 3969.214515317126 4021.1367373328308 4592.037431203263 3801.2346460029707 3989.6149631463677 4073.2563967720434 3822.6395526413216 4636.538488180746 3849.0416356236256 4477.6278683424935 3833.219308784023 1.0354780657139713 1.049023396109423 1.1979584420542724 0.9916559267277618 1.040800079975585 1.0626202334518047 0.9972399815167222 1.2095677587650346 1.0041276863036104 1.168111581323243 1.0 11.904340825624425 -8.941512313151181 24.99999934437046 1.0018191649255175 1.0720632851508345 0.0 0.08389023841418197 89.89076656298194 38422.75389633452 0.010966497644772318 0.01167447947739224 1.1441624399739684e-09 8.941512313151181 0.07024412022531701 TDVSNFDEEFTGEAPTLS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 TDVSNFDEEFTGEAPTLSPPR 21 0 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFTGEAPT(0.071)LS(0.929)PPR 122.79 1.6902999999999999e-15 2528800.0 535.51 687.57 464.51 487.01 841.25 687.8 640.77 576.65 1057.1 965.37 925.92 True False 625.8909960375112 722.5643761510818 530.3845027845226 606.3274718627098 717.5032393971368 760.582539475311 757.1896147387749 658.3919034165601 817.6685378418222 747.2922465214165 695.9885099080244 0.8992835185170274 1.038184346242396 0.7620592800513524 0.8711745427274893 1.0309124779832293 1.0928090459077016 1.0879340735651488 0.9459809954385128 1.1748305125753842 1.0737134821667844 1.0 9.44291967855628 -6.866446774018808 4.414327799815506 1.0737177108096225 0.8940441998533615 0.4920603873243392 0.08068533455219372 0.15039604259667425 5.1606851396886935 0.013208585574746266 0.02574034270356705 1.3600448365630033e-07 6.866446774018808 -0.17967351095626105 TDVSNFDEEFTGEAPTLS(ph)PPRDAR ddPTM_A549_MK2206_60min_R1 2 TDVSNFDEEFTGEAPTLSPPRDAR 24 1 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFTGEAPT(0.216)LS(0.784)PPRDAR;TDVSNFDEEFTGEAPT(0.084)LS(0.916)PPRDAR 308.57 1.5341999999999997e-176 55656000.0 3745.3999999999996 4023.8 3552.1 3583.4 4775.5 4320.7 4441.9 3833.7999999999997 5166.6 6189.599999999999 6103.4 True False 4377.531953761637 4228.594232960607 4055.841192527399 4461.333160864938 4073.030276066599 4777.913606151458 5248.935733115097 4377.252890520089 3996.37334936483 4791.365061136106 4587.757334729394 0.9541768743136548 0.9217127071979339 0.8840574809449093 0.9724431427731752 0.8878042099641359 1.0414486332968351 1.1441179971269562 0.954116046501461 0.8710951904784113 1.0443806660970054 1.0 12.163573367985913 -4.849209987667274 17.166594564856275 0.9523741234061094 1.653483114889454 0.0 0.08102863355682673 10614.437587584991 1814730.740844784 0.011318599708725998 147219.38706954298 1.4151093886444547e-05 4.849209987667274 0.7011089914833446 TDVSNFDEEFTGEAPTLS(ph)PPRDAR ddPTM_A549_PD325901_60min_R1 1 TDVSNFDEEFTGEAPTLSPPRDAR 24 1 Q16512;Q16512-2 Q16512 PKN1 Serine/threonine-protein kinase N1 1 TDVSNFDEEFTGEAPT(0.029)LS(0.971)PPRDAR 291.69 1.6776999999999995e-157 45538000.0 8361.3 8200.8 8991.4 8468.8 9440.2 8659.7 7876.2 9526.7 9121.0 9742.9 9879.8 True False 9210.133020736272 8891.910196710101 9601.610473680532 8991.898541959712 8777.152918922007 8589.178274314387 8175.933101022013 9336.682494948434 8737.676089131899 9127.731631266284 8664.647233212321 1.062955337112059 1.0262287612387337 1.1081363401474387 1.0377685669063375 1.0129844508012331 0.9912900136766497 0.9435967652188971 1.0775606027167668 1.008428370359921 1.0534452685250615 1.0 13.080925298299666 -6.647258113763834 3.41523193325028 1.004502120601369 1.0631495481630346 0.26605958099519633 0.03715581871025802 0.18631069889428858 4.248174890480215 0.004659093554520313 0.010220222226890174 2.252899850680131e-07 6.647258113763834 0.058647427561665744 TDYIPLLDVDEKTGNS(ph)ESK ddPTM_A549_PD325901_60min_R1 2 TDYIPLLDVDEKTGNSESK 19 1 E7EVA0;A0A0J9YW37;A0A0J9YVV8;P27816-7;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TDYIPLLDVDEKT(0.247)GNS(0.581)ES(0.171)K;TDYIPLLDVDEKT(0.059)GNS(0.471)ES(0.471)K 80.22399999999999 7.3893e-05 6583900.0 3429.5 2888.2 3297.0 3586.1000000000004 3301.6 3686.7 3541.3 3968.5 3666.4 3493.3999999999996 4087.0 True False 3777.6603153355354 3131.5987501387813 3520.7542464715984 3807.6052523759863 3069.707005901668 3656.6767375214886 3676.0661093737144 3889.3451542719754 3512.3139582494473 3272.8261278126256 3584.3249096275977 1.053939140725952 0.8736927675633475 0.9822642576332166 1.0622935555168704 0.8564254310920163 1.020185622039886 1.02559511262489 1.0850983804021461 0.9799094799735574 0.913094155895779 1.0 11.807485704496933 TDYIPLLDVDEKTGNSES(ph)K ddPTM_A549_MK2206_60min_R1 2 TDYIPLLDVDEKTGNSESK 19 1 E7EVA0;A0A0J9YW37;A0A0J9YVV8;P27816-7;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TDYIPLLDVDEKT(0.293)GNS(0.293)ES(0.414)K;TDYIPLLDVDEKT(0.329)GNS(0.273)ES(0.398)K 71.592 0.00023898 3402200.0 1593.81 1921.31 1731.44 1428.33 2371.3999999999996 1781.4099999999999 1700.48 1542.73 2920.2 2774.3 2527.1 True False 1862.806163086675 2019.0964724214768 1976.9842274681573 1778.2709141201708 2022.570201374584 1969.9176237957452 2009.435204630352 1761.4167019124764 2258.779362601163 2147.583703164971 1899.551325588138 0.98065587278086 1.0629333596955193 1.0407637850248899 0.9361531274073805 1.064762069931623 1.037043641442971 1.0578472808615433 0.9272803941568188 1.1891120456573085 1.130574190986936 1.0 10.891442978592423 -8.756726386760498 24.999998933727028 1.0893029078878802 1.0173940745728485 0.2959398229372511 0.06222886577182124 167.6949312227603 889535.1321407461 0.013248660289459724 0.01478176828116242 1.7509494704767858e-09 8.756726386760498 -0.07190883331503173 TDYNASVSVPDSSGPER ddPTM_A549_MK2206_60min_R1 2 TDYNASVSVPDSSGPER 17 0 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 216.54 7.3753e-55 14900400.0 5859.3 5874.700000000001 6040.2 5533.5 7625.1 6212.7 5243.7 5983.2 8813.6 8797.8 8304.099999999999 False True 6848.206593868625 6173.697137127507 6896.791185806707 6889.207748408257 6503.457890908892 6870.123790343506 6196.412414447793 6831.336922781523 6817.3336724270985 6810.370869662532 6241.962788499251 1.0971239057186262 0.989063431858722 1.104907449707001 1.1036925374021052 1.0418930889641707 1.1006351724815846 0.9927025559756005 1.0944212828964934 1.0921778779245468 1.091062395022695 1.0 12.60778404130921 -10.898601055434655 1.1263482964612852 0.9996440042583341 1.0689092231171018 0.0 0.04874238783809709 0.5103091248112003 1.140247574688495 0.02779362790299085 0.0064997098691803095 1.2629871867192501e-11 10.898601055434655 0.06926521885876769 TDYNASVSVPDSSGPER ddPTM_A549_PD325901_60min_R1 1 TDYNASVSVPDSSGPER 17 0 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 258.91 3.770699999999999e-86 8655600.0 5162.7 5469.1 5780.7 5415.8 6649.7 6118.2 4555.2 5981.9 5555.0 5600.0 6533.2 False True 5686.813503421134 5930.000250808118 6173.013064172997 5750.32166582579 6182.648012219621 6068.375407682744 4728.550628701083 5862.586311790229 5321.542668032857 5246.415044298022 5729.657817367021 0.9925223607915951 1.0349658635518937 1.0773790095216738 1.003606471645852 1.0790606017482496 1.0591165478135611 0.8252762694429138 1.0232000755822261 0.9287714620413916 0.9156594008800569 1.0 12.484233266588674 TEAACLSAPHLAS(ph)PPATPK ddPTM_A549_MK2206_60min_R1 1 TEAACLSAPHLASPPATPK 19 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 TEAACLSAPHLAS(0.998)PPAT(0.002)PK 85.24799999999999 2.0762e-05 1664200.0 1062.2 1309.2 1307.2 1019.4 1529.4 1165.5 1129.4 806.01 1818.3 1500.1 1751.9 True False 1241.4733917033182 1375.8326879546755 1492.5806162190868 1269.153045762605 1304.427285983929 1288.8324364037148 1334.5973608096067 920.2643858021013 1406.4579532284422 1161.2263681353036 1316.8548800197295 0.9427564195112509 1.0447868697073608 1.1334435091258686 0.963775936907786 0.9905626700220648 0.9787201733150772 1.0134733758890815 0.698835080284863 1.068043240427047 0.8818180239556128 1.0 10.362880651204426 -4.259180714636771 15.177967576028148 1.0051093830464743 1.001839450214178 0.0 0.11184800330661383 0.0 0.0 0.013554091707351478 0.0 5.50578547037463e-05 4.259180714636771 -0.003269932832296263 TEADEDRGQGDS(ph)SEEAPK ddPTM_A549_MK2206_60min_R1 2 TEADEDRGQGDSSEEAPK 18 1 H7C2K7;O60279 H7C2K7 SUSD5 Sushi domain-containing protein 5 1 TEADEDRGQGDS(0.82)S(0.179)EEAPK;TEADEDRGQGDS(0.97)S(0.03)EEAPK 63.69 0.00072743 5730800.0 892.63 998.25 953.61 759.9200000000001 1812.5500000000002 1576.67 1228.19 1587.89 1580.85 1334.96 870.6099999999999 True False 1043.284121291784 1049.0566611295098 1088.8462373261038 946.1004341141048 1545.9262960704657 1743.5121728911577 1451.3362250511339 1812.9782702091763 1222.7899990987082 1033.391608830014 654.4135093863674 1.594227665425266 1.6030486016604282 1.6638504885803729 1.4457226517240565 2.3623080420819167 2.664236217443035 2.2177662964385125 2.7703863752891893 1.868528050781375 1.5791110574703877 1.0 9.354058720639268 TEADEDRGQGDS(ph)SEEAPK ddPTM_A549_PD325901_60min_R1 2 TEADEDRGQGDSSEEAPK 18 1 H7C2K7;O60279 H7C2K7 SUSD5 Sushi domain-containing protein 5 1 TEADEDRGQGDS(0.833)S(0.167)EEAPK;TEADEDRGQGDS(0.966)S(0.034)EEAPK 92.336 1.3097e-06 6165300.0 1785.53 1782.5 1534.9699999999998 1623.3 1855.31 1773.02 1843.98 1790.58 1964.1599999999999 2067.13 1895.9299999999998 True False 1966.7956911622869 1932.7175306842942 1639.1422947244475 1723.5675542182123 1724.9994260720327 1758.5811129629083 1914.1536679645744 1754.8654772171644 1881.6131857503908 1936.6110590213868 1662.7426292904936 1.1828623723934566 1.1623672218646377 0.9858063814866427 1.0365810822771009 1.0374422329017359 1.0576387962779963 1.151202618039185 1.0554041535375684 1.1316322518015258 1.1647088520535227 1.0 10.699349160333842 -10.991223467572881 1.2602741154544783 0.999897376373463 1.0897652817747752 0.0 0.07613999980046222 0.5688927788134834 1.6048115146967428 0.04381538778740467 0.009978882656105083 1.0204142912605867e-11 10.991223467572881 0.08986790540131218 TEADEDRGQGDS(ph)SEEAPKQDR ddPTM_A549_MK2206_60min_R1 1 TEADEDRGQGDSSEEAPKQDR 21 2 H7C2K7;O60279 H7C2K7 SUSD5 Sushi domain-containing protein 5 1 TEADEDRGQGDS(0.868)S(0.132)EEAPKQDR 103.9 2.0373999999999999e-10 7642900.0 602.09 613.09 517.61 516.25 787.69 289.82 497.59 682.47 843.0 676.54 772.2 True False 703.708072312795 644.2936622808834 591.0148812432384 642.7312731753433 671.8218444466335 320.48856003305394 587.995662090714 779.2122124767191 652.0618459943777 523.7091441225634 580.4414283641964 1.212367067416241 1.1100063344834563 1.0182162271029485 1.107314608791265 1.1574326221682105 0.5521462534751469 1.0130146356847871 1.3424476172775945 1.123389568921747 0.9022601050350312 1.0 9.18100668361524 -5.376684138103422 2.6398279544913414 1.0494026528887008 1.2261112698480319 0.07288285073203737 0.1859504942876631 0.8626241771349658 8.989044693901475 0.024933126524593546 0.29432538849600914 4.200643852815712e-06 5.376684138103422 0.17670861695933104 TEADEDRGQGDS(ph)SEEAPKQDR ddPTM_A549_PD325901_60min_R1 2 TEADEDRGQGDSSEEAPKQDR 21 2 H7C2K7;O60279 H7C2K7 SUSD5 Sushi domain-containing protein 5 1 TEADEDRGQGDS(0.984)S(0.016)EEAPKQDR;TEADEDRGQGDS(0.853)S(0.147)EEAPKQDR 164.43 1.1323999999999999e-28 22139000.0 1783.37 1557.48 1790.95 1553.58 2207.4300000000003 2051.13 1785.9 1608.0900000000001 1599.63 2209.4 2151.58 True False 1964.4164095523943 1688.7343055765357 1912.4946368572353 1649.5411081638208 2052.387732020086 2034.4262773299843 1853.8634017819772 1576.0153834278005 1532.4031139631697 2069.8981069414385 1886.949299989368 1.0410541552777612 0.8949547852642628 1.0135379031476952 0.8741841172802657 1.0876750806349964 1.0781563009358266 0.9824659315395612 0.8352187223242726 0.8121061408336748 1.0969548079289153 1.0 10.881839944676992 -8.095652881124543 8.513447173067338 0.9031905572701298 0.9957603186500883 0.046486598344303465 0.09647646745901789 0.43728493887126346 35.644610616722325 0.014924528729090475 0.019290651220475404 8.023190773508869e-09 8.095652881124543 0.09256976137995854 TEADEDRGQGDSS(ph)EEAPKQDR ddPTM_A549_MK2206_60min_R1 1 TEADEDRGQGDSSEEAPKQDR 21 2 H7C2K7;O60279 H7C2K7 SUSD5 Sushi domain-containing protein 5 1 TEADEDRGQGDS(0.422)S(0.578)EEAPKQDR 122.04 1.3254000000000002e-15 8632700.0 371.66 608.88 463.48 327.61 678.55 442.13 456.99 525.93 679.15 709.74 828.3 True False 434.3871217854035 639.8693912632472 529.2084332965286 407.87446470697176 578.7361938697499 488.91590313785844 540.0191676256264 600.4821880930749 525.3236093796934 549.4092410641626 622.6102500829627 0.6976870710488969 1.0277206184414482 0.8499834900341131 0.6551039990951363 0.929532068886809 0.7852679956244063 0.867347056290302 0.9644592070449544 0.843743914125561 0.8824288405000624 1.0 9.282185517982608 -13.911846152367938 0.22460770037415428 1.476472401690849 0.8259921008756465 0.08157869751880897 0.10739536526672114 29.286563707945117 0.557660896835711 6.276520363282822 0.0662360904950167 1.2250500930516142e-14 13.911846152367938 -0.6504803008152026 TEAELSQDLET(ph)SPTAKPQIK ddPTM_A549_MK2206_60min_R1 2 TEAELSQDLETSPTAKPQIK 20 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEAELS(0.001)QDLET(0.494)S(0.494)PT(0.01)AKPQIK;TEAELSQDLET(0.67)S(0.324)PT(0.006)AKPQIK 94.384 9.1913e-07 7207600.0 3218.6 3157.5 3403.2999999999997 2968.0 4271.0 3491.5 2979.5 3122.8999999999996 4578.6 4391.8 4351.3 True False 3761.8209927850708 3318.203263227077 3885.9391150385686 3695.160133238581 3642.7415577594893 3860.9682125298755 3520.836582727311 3565.580638480143 3541.5544105217778 3399.6893297624306 3270.752120229382 1.1501394341437434 1.0145077160400549 1.1880873182055884 1.129758537916788 1.1137320786951044 1.180452712588657 1.076460842431676 1.0901408934132508 1.0827951126646076 1.0394212721702696 1.0 11.675406711014388 -9.83653619305245 0.47304806634106716 0.9945645259872076 1.124720382981634 0.4055225818898759 0.04628355105743929 0.6371817119186471 0.29036041900852944 0.03538757250250359 0.013072659571696425 1.457014275622502e-10 9.83653619305245 0.13015585699442633 TEAELSQDLET(ph)SPTAKPQIK ddPTM_A549_PD325901_60min_R1 1 TEAELSQDLETSPTAKPQIK 20 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEAELSQDLET(0.682)S(0.318)PTAKPQIK 123.14 5.3086e-15 8590100.0 3785.2 4202.0 4847.3 4238.7 4533.0 4746.2 4234.0 4315.0 3935.5 4682.7 5406.3 True False 4169.4707174830355 4556.117286920283 5176.266927182823 4500.514872213851 4214.617718001049 4707.548520797595 4395.127186933698 4228.933939947984 3770.104621069907 4387.03352284542 4741.3593733593525 0.8793829763064085 0.9609305956684271 1.0917263425057209 0.9492034916191434 0.8889049291817136 0.9928689538380632 0.9269761772602481 0.8919243632341869 0.7951526817927553 0.9252691427473708 1.0 12.211085031557694 -7.984226911939341 5.498931965087691 0.900048476020063 0.962753379327379 0.13270418317319743 0.06865024455804151 0.3293951005567009 31.406666131507436 0.014091653784136174 0.019240646743435192 1.0369864653629783e-08 7.984226911939341 0.06270490330731604 TEAELSQDLETS(ph)PTAKPQIK ddPTM_A549_MK2206_60min_R1 1 TEAELSQDLETSPTAKPQIK 20 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEAELSQDLET(0.458)S(0.516)PT(0.026)AKPQIK 74.579 0.00010789 3614800.0 1295.9 1514.1 1450.3 1420.7 1668.0 1226.4 1159.8 1426.6 2419.5 1776.4 2116.0 True False 1514.616238286887 1591.1612227560147 1655.9743479976603 1768.7715637776464 1422.6394095862381 1356.1768339815665 1370.5206473056332 1628.8249187792683 1871.4871131475638 1375.1100062366197 1590.53880137094 0.9522661358411295 1.0003913273819778 1.041140490612564 1.1120581039916042 0.894438669688546 0.852652467712596 0.8616706779641807 1.024071162159218 1.176637194600009 0.8645560894530615 1.0 10.635299851674771 -8.522299266243097 24.99999997323721 1.0843037059525913 0.9617955873817176 0.0 0.10481613967409831 22.884632846838812 987320.2419844418 0.01673746798676899 0.01908601263611075 3.004005571100623e-09 8.522299266243097 -0.12250811857087374 TEAELSQDLETS(ph)PTAKPQIK ddPTM_A549_PD325901_60min_R1 1 TEAELSQDLETSPTAKPQIK 20 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEAELSQDLET(0.147)S(0.834)PT(0.018)AKPQIK 134.81 1.451e-17 13034000.0 4391.4 4848.2 5112.5 4663.1 5607.4 5316.9 4982.8 5821.5 5140.7 5115.6 5356.7 True False 4837.211695222181 5256.7748287593795 5459.464993959973 4951.129096331514 5213.555568479832 5273.6009292125755 5172.423180692785 5705.385615621601 4924.654256265801 4792.600142966243 4697.859858919049 1.0296628338196527 1.1189722526054522 1.162117465806263 1.0539116204012824 1.109772476201417 1.1225539048808497 1.1010169174954765 1.2144648386625942 1.0482761095812971 1.0201666901296185 1.0 12.197787961856791 -8.972826160069605 14.230613360274774 1.0212857084166596 1.1146434543459092 0.44165173364045374 0.046586427713116677 1.0568875115501044 553.0805041638506 0.008075494474758414 0.00841789883042836 1.0645690599655565e-09 8.972826160069605 0.09335774592924961 TEAFTS(ph)PEALQPGGTALAPK ddPTM_A549_PD325901_60min_R1 1 TEAFTSPEALQPGGTALAPK 20 0 Q7Z5J4;Q7Z5J4-3 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 TEAFT(0.093)S(0.906)PEALQPGGTALAPK 120.24 2.3103e-14 2669300.0 1530.5 1303.1 1820.4 1346.4 1695.4 1533.4 1268.4 1570.5 1113.9 1458.0 1995.0 True False 1685.8752333054504 1412.9168102298481 1943.9432909544726 1429.56407010374 1576.3209528124812 1520.9124987971493 1316.669656095112 1539.1751454665846 1067.0866566915936 1365.9416311761627 1749.6276473469682 0.963562296161593 0.8075528598169511 1.111061141438953 0.8170676042250741 0.900946527224076 0.8692778152559323 0.7525427813692999 0.8797158342807961 0.6098935726751121 0.7807041876866748 1.0 10.772832207585983 -6.404019941260686 19.560926669657825 0.822109508715558 0.9485430532808468 0.21538464157894632 0.11343436034396466 6.320787216086824 1018.9202448205265 0.021027305323986768 0.04886312191365576 3.9443919041226645e-07 6.404019941260686 0.12643354456528877 TEAGAET(ph)RSPGKAEAESDALPDDTVIESEALPSDIAAEAR ddPTM_A549_PD325901_60min_R1 1 TEAGAETRSPGKAEAESDALPDDTVIESEALPSDIAAEAR 40 2 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 T(0.089)EAGAET(0.456)RS(0.456)PGKAEAESDALPDDTVIESEALPSDIAAEAR 168.21 9.490899999999999e-66 548740000.0 1945.8 1721.8 1758.9 2049.1 1559.3 2055.4 1806.8 1910.3 2238.3 1873.5 2057.9 True False 2143.3361835777487 1866.902128657626 1878.2695311249297 2175.668253156249 1449.7801472929696 2038.6615038656978 1875.5587627188975 1872.1975678986419 2144.2320348979215 1755.2068902664896 1804.7913461029202 1.18758115069969 1.0344143840720543 1.0407128420582639 1.2054957255054233 0.8032951567633981 1.1295829339318213 1.0392108576810195 1.0373484845997691 1.1880775246002562 0.9725262114407307 1.0 10.817616339867186 TEAGAETRS(ph)PGKAEAES(ph)DALPDDTVIESEALPSDIAAEAR ddPTM_A549_PD325901_60min_R1 2 TEAGAETRSPGKAEAESDALPDDTVIESEALPSDIAAEAR 40 2 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 T(0.096)EAGAET(0.427)RS(0.491)PGKAEAES(0.938)DALPDDT(0.047)VIES(0.001)EALPSDIAAEAR;T(0.036)EAGAET(0.167)RS(0.803)PGKAEAES(0.994)DALPDDT(0.001)VIESEALPSDIAAEAR 101.0 1.1102e-14 36750000.0 1256.17 876.01 1108.31 1318.21 1089.7 1803.49 1047.08 1970.27 1335.4499999999998 1539.65 1963.51 True False 1383.6954536565213 949.8344370573623 1183.526581409444 1399.6328378278765 1013.1632312609183 1788.8029753852031 1086.9272023841618 1930.9714192030854 1279.3256806524726 1442.4362362416875 1722.0107177154107 0.8035347512193584 0.5515845094840678 0.6872933886146928 0.8127898528324885 0.5883605838441474 1.0387873646677448 0.6311965373979708 1.121346922721191 0.7429255041744178 0.8376464916289056 1.0 10.749878406692288 -14.999999961186159 0.04203876283337639 2.035233807674377 0.16332115180341408 0.18670577144589018 0.1615097329950549 511.3122762681321 1.6501716462199059 67.01292736785744 19.713529962308517 1.0000000893721758e-15 14.999999961186159 -1.871912655870963 TEAGAETRS(ph)PGKAEAESDALPDDTVIESEALPSDIAAEAR ddPTM_A549_MK2206_60min_R1 2 TEAGAETRSPGKAEAESDALPDDTVIESEALPSDIAAEAR 40 2 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 TEAGAET(0.039)RS(0.961)PGKAEAESDALPDDTVIESEALPSDIAAEAR;T(0.001)EAGAET(0.156)RS(0.843)PGKAEAESDALPDDTVIESEALPSDIAAEAR 413.65 0.0 549030000.0 4102.4400000000005 4811.03 4734.5 4684.7 3375.45 3167.24 3354.43 2897.4 4073.1200000000003 7455.0 7776.4 True False 4794.831576971725 5055.8908774294105 5405.923292142949 5832.451710304174 2878.925776431578 3502.3952345562398 3963.8865105547793 3308.115322915358 3150.564823436083 5770.9103222776375 5845.305262278345 0.8202876260226016 0.8649489890727722 0.9248316468652423 0.9978010469261342 0.49251932059224035 0.5991808943081783 0.6781316514186226 0.5659439797376711 0.5389906398503602 0.9872727023375832 1.0 12.513062653965694 -3.7783073733258234 19.969316923969245 0.759648889867293 0.8381651467602987 0.0 0.19028999795406693 0.0 0.0 0.028464662302819348 0.0 0.00016660676304135693 3.7783073733258234 0.07851625689300579 TEAPGT(ph)PEGPEPERPS(ph)PGDGNPR ddPTM_A549_MK2206_60min_R1 2 TEAPGTPEGPEPERPSPGDGNPR 23 1 A0A0G2JNW7;Q9Y666;Q9Y666-2 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 2 T(0.157)EAPGT(0.843)PEGPEPERPS(1)PGDGNPR;T(0.092)EAPGT(0.908)PEGPEPERPS(1)PGDGNPR 60.176 0.00052456 10226800.0 1092.5 1195.22 1054.0900000000001 958.71 1412.5 1152.6999999999998 1251.07 1177.48 1653.47 1560.69 2199.8 True False 1276.8872909394427 1256.0515928026182 1203.5758122325406 1193.5939930381278 1204.7231211274361 1274.677948899666 1478.3732248876174 1344.3913958812648 1278.9616850490195 1208.1290450537206 1653.5289486085985 0.7722194957723056 0.7596187498619561 0.7278831212754504 0.7218464448672072 0.728576976013138 0.7708833582697625 0.8940715710672196 0.8130437613520677 0.7734740211988622 0.730636766940385 1.0 10.69133258791623 -14.99999999999942 0.19989451669384986 2.093034332843132 0.7308839595270284 0.0 0.09202530679762602 15.095604771822195 0.17757503992457088 6.441105181101438 0.038956365032057697 1.0000000000013376e-15 14.99999999999942 -1.3621503733161036 TEAPGT(ph)PEGPEPERPS(ph)PGDGNPR ddPTM_A549_PD325901_60min_R1 2 TEAPGTPEGPEPERPSPGDGNPR 23 1 A0A0G2JNW7;Q9Y666;Q9Y666-2 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 2 T(0.047)EAPGT(0.953)PEGPEPERPS(1)PGDGNPR;T(0.04)EAPGT(0.96)PEGPEPERPS(1)PGDGNPR 68.93 0.00022094 15439400.0 1525.49 1540.84 1662.99 1379.36 1669.69 1272.3600000000001 1589.06 1258.45 1915.75 1494.2800000000002 1658.38 True False 1680.356621793616 1670.6919943784494 1775.8505017712462 1464.5599344461498 1552.4167345177964 1261.9983220096144 1649.5325478669968 1233.3492275150734 1835.2376897000818 1399.9309057845803 1454.4097733369747 1.155352949766167 1.1487078985623427 1.2210111168991686 1.0069788867589131 1.0673860716405639 0.8677047866050195 1.1341594219917372 0.8480066966858291 1.261843617489823 0.9625422844709033 1.0 10.50621808395568 -6.252502787463169 24.364089532938586 1.078627672594995 1.1723923722632266 0.13119400851380125 0.1215279596704157 952.2465806078674 2596126.6578141768 0.018949978662646316 0.04928940050374611 5.59109938983947e-07 6.252502787463169 0.09376469966823153 TEAPGT(ph)PEGPEPERPSPGDGNPR ddPTM_A549_MK2206_60min_R1 2 TEAPGTPEGPEPERPSPGDGNPR 23 1 A0A0G2JNW7;Q9Y666;Q9Y666-2 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 TEAPGT(1)PEGPEPERPSPGDGNPR;TEAPGT(1)PEGPEPERPSPGDGNPR 144.23 1.6828e-27 277780000.0 9966.7 9899.4 9627.599999999999 8487.7 12329.7 9663.9 9526.2 9875.3 14003.2 12715.0 11755.8 True False 11648.835297579988 10403.237176243905 10992.938449136227 10567.186881027332 10516.017463054834 10686.527483622356 11256.98723086991 11275.154016837874 10831.497558515379 9842.672669048983 8836.510416425568 1.3182619324396185 1.1773015235636524 1.2440361557999442 1.1958551943066498 1.1900645127410643 1.2093605937201093 1.2739177232162924 1.275973601058545 1.2257663996391006 1.1138642071595515 1.0 13.109261039025059 -10.516017438914764 0.7435879108117115 0.9929574550056983 1.2329361490317245 0.6108170952305303 0.0518234729543194 0.23213443622974156 0.22163098610858492 0.032254725649737206 0.008259126421739954 3.0477726051261895e-11 10.516017438914764 0.23997869402602623 TEAPGT(ph)PEGPEPERPSPGDGNPR ddPTM_A549_PD325901_60min_R1 2 TEAPGTPEGPEPERPSPGDGNPR 23 1 A0A0G2JNW7;Q9Y666;Q9Y666-2 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 TEAPGT(0.999)PEGPEPERPS(0.001)PGDGNPR;TEAPGT(1)PEGPEPERPSPGDGNPR 223.09 6.997000000000001e-88 339260000.0 14685.7 15736.1 15992.4 13737.400000000001 18275.2 14034.0 15375.9 16617.0 16028.5 16238.2 16086.6 True False 16176.581452959057 17062.23637284776 17077.74043411355 14585.927998100959 16991.612998017372 13919.711756957875 15961.038288515321 16285.560899215678 15354.877885610214 15212.917280771455 14108.050181359262 1.1466206346737349 1.2093971990113714 1.2104961503949068 1.033872704633069 1.2043913070615608 0.9866502867525779 1.1313426081801425 1.1543452631557496 1.0883770392239154 1.0783146561862982 1.0 13.78423099200191 -14.999999743269822 0.03516557674872442 0.2726343861326057 1.5796259304467073 0.25250348856123106 0.06754095862881361 489.36751657775034 1.327085462120422 40.89497200682227 14.649458871257018 1.0000005911432566e-15 14.999999743269822 1.3069915443141016 TEAPGTPEGPEPERPS(ph)PGDGNPR ddPTM_A549_MK2206_60min_R1 1 TEAPGTPEGPEPERPSPGDGNPR 23 1 A0A0G2JNW7;Q9Y666;Q9Y666-2 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 TEAPGT(0.001)PEGPEPERPS(0.999)PGDGNPR 66.282 0.00016381 13111000.0 445.45 543.15 518.17 341.24 610.69 507.05 626.71 601.01 715.63 823.18 1028.6 True False 520.6310697931117 570.7940150187761 591.6542976638957 424.84381531884577 520.8583099761515 560.7056944474501 740.5750947343627 686.2050080159312 553.5409476262826 637.2230662766606 773.1702320841908 0.6733718503228924 0.7382514113096663 0.7652316050360695 0.5494828922391626 0.67366575737416 0.7252034172810661 0.9578422241348282 0.8875212463446343 0.7159367040478704 0.8241691671948295 1.0 9.59464228302584 -7.613932453801397 6.005244587881023 0.8704389834087113 0.68248331724598 0.5578496557459074 0.08458251187943192 0.16971707624083537 9.169308465020633 0.017591065174687327 0.026194350562705776 2.432582321298198e-08 7.613932453801397 -0.1879556661627313 TEAQDLCRAS(ph)PEPPGPESSSR ddPTM_A549_MK2206_60min_R1 7 TEAQDLCRASPEPPGPESSSR 21 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;T(0.002)EAQDLCRAS(0.998)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;T(0.002)EAQDLCRAS(0.993)PEPPGPES(0.002)S(0.002)S(0.002)R 166.57 4.4533e-29 897134500.0 9057.359999999999 10460.42 11242.03 7967.6 12315.07 9073.769999999999 8389.79 7554.39 13265.34 14592.77 14175.07 True False 10586.020936808476 10992.810697933743 12836.31889913821 9919.662357679152 10503.539516674586 10033.950318718942 9914.10624379922 8625.247916849086 10260.761670395084 11296.25312188108 10655.008906970304 0.9935253015024044 1.0317035672060728 1.2047215550182162 0.9309858343891103 0.9857842080078759 0.9417120535821347 0.9304643788062533 0.8095017087415678 0.9629988824957892 1.060182419415087 1.0 13.379244178680063 -6.317272379374116 24.99992695670409 0.9606568937472323 1.0721565478372088 0.3452870200395164 0.07536678776714933 244.84066362691595 109630.02085492498 0.010072617525286636 0.02340666351734324 4.816456259697708e-07 6.317272379374116 0.11149965408997653 TEAQDLCRAS(ph)PEPPGPESSSR ddPTM_A549_PD325901_60min_R1 10 TEAQDLCRASPEPPGPESSSR 21 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 T(0.002)EAQDLCRAS(0.995)PEPPGPES(0.001)S(0.001)S(0.001)R;TEAQDLCRAS(1)PEPPGPESSSR;T(0.001)EAQDLCRAS(0.999)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;T(0.016)EAQDLCRAS(0.969)PEPPGPES(0.005)S(0.005)S(0.005)R;T(0.001)EAQDLCRAS(0.677)PEPPGPES(0.102)S(0.102)S(0.118)R;T(0.005)EAQDLCRAS(0.994)PEPPGPESSSR 179.86 1.3411999999999999e-36 1249171800.0 19532.010000000002 21024.83 22686.200000000004 21114.05 22548.670000000006 21240.570000000003 22201.120000000003 21419.07 21418.53 23675.800000000003 24249.11 True False 21514.885276494195 22796.666210747295 24225.821955202904 22418.216915013272 20964.929207888516 21067.59384020853 23045.99577051903 20991.849845914643 20518.383669044448 22180.905947462692 21266.623197773337 1.011673789318224 1.0719457432778587 1.139147561411602 1.0541502854745886 0.9858137332345076 0.9906412336498422 1.0836697277324214 0.9870795965441536 0.9648162511852266 1.042991439740423 1.0 14.37630335395852 -6.666675772601341 4.510578008187269 0.9917307590577416 1.0771435507022977 0.28232680194147575 0.04284269212207896 0.14492581180057562 5.209599952384688 0.005946063529890472 0.012618656895262847 2.1543895180651712e-07 6.666675772601341 0.08541279164455617 TEAQGEEDDAEGQDQDKKS(ph)PKPK ddPTM_A549_MK2206_60min_R1 4 TEAQGEEDDAEGQDQDKKSPKPK 23 3 A0A2R8Y611;O14617-2;O14617-5 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK 116.87 9.6181e-16 351290600.0 4614.1 4263.400000000001 4562.66 4291.11 4660.599999999999 4126.61 4008.2599999999998 4305.900000000001 4979.2 6078.1 5274.2 True False 5392.84727608575 4480.388849546263 5209.713796204237 5342.432142635249 3975.0319138594878 4563.285131177977 4736.508958242179 4916.274511265699 3851.4191501485216 4705.05298857622 3964.470579485166 1.3602944372930814 1.1301354770371623 1.3141007586644218 1.3475776993479487 1.0026639961534771 1.151045275702506 1.1947393386526963 1.2400834897617368 0.9714838521134074 1.1868048694631068 1.0 11.952912504097537 -8.14755852784514 0.5263783763299067 0.9748232488403246 1.2653575662528354 0.14681536700958486 0.12219116572279502 0.4890956217527657 0.2950886612200143 0.0321324153851649 0.04952882237939367 7.11936849119725e-09 8.14755852784514 0.2905343174125108 TEAQGEEDDAEGQDQDKKS(ph)PKPK ddPTM_A549_PD325901_60min_R1 3 TEAQGEEDDAEGQDQDKKSPKPK 23 3 A0A2R8Y611;O14617-2;O14617-5 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK 100.95 8.535700000000002e-11 41787500.0 2608.16 2156.34 2727.0999999999995 2806.52 3416.38 2643.77 2753.79 2382.1 2515.5299999999997 3883.83 2971.6800000000003 True False 2872.938483174087 2338.0623394758873 2912.177405384497 2979.8723663306246 3176.4252546711714 2622.2400136591486 2858.586985381709 2334.5871467786997 2409.8110220912154 3638.6043109814273 2606.182199031599 1.1023551938316551 0.8971215981540588 1.1174112870798516 1.143386048541764 1.21880398686303 1.0061614320877168 1.0968484806794776 0.8957881561949821 0.9246517848931088 1.3961434900190226 1.0 11.34772223136587 -8.246933187675793 24.270016432758023 0.9582774147479599 1.08189033134619 0.0 0.15456942824972056 481.1341855207995 804976.111892065 0.013427703287300558 0.01729112935386701 5.6632640659263814e-09 8.246933187675793 0.12361291659823015 TEAREES(ph)EPEVKEDVIEK ddPTM_A549_MK2206_60min_R1 2 TEAREESEPEVKEDVIEK 18 2 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 T(0.002)EAREES(0.998)EPEVKEDVIEK;T(0.116)EAREES(0.884)EPEVKEDVIEK 70.76 0.00023035 6360200.0 1216.1399999999999 1261.98 1006.6300000000001 1178.03 1487.31 1630.89 1490.56 1463.9099999999999 1993.9299999999998 1366.99 1536.85 True False 1421.3947002316647 1326.2093916476033 1149.3852705818695 1466.647402883776 1268.5286692276427 1803.469697302835 1761.3754578788448 1671.4237255363507 1542.3080386519214 1058.1860095842126 1155.2077300977928 1.23042346687841 1.1480267635807238 0.9949598160017242 1.269596250675728 1.0980957244116232 1.5611648453479134 1.5247261700107717 1.446859886745095 1.3350915151176828 0.9160136155725283 1.0 10.173936585857529 -4.338916152558676 16.60651749964443 1.2190866369648805 1.1690268952644547 0.0 0.2106750845744192 0.0 0.0 0.028973711234583713 0.0 4.582303468148164e-05 4.338916152558676 -0.05005974170042582 TEARS(ph)SDEENGPPSSPDLDR ddPTM_A549_MK2206_60min_R1 1 TEARSSDEENGPPSSPDLDR 20 1 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 1 T(0.142)EARS(0.429)S(0.429)DEENGPPSSPDLDR 60.218 0.00069455 10238000.0 1161.2 1113.4 1925.7 1128.1 1465.4 1013.6 973.4 1143.6 1802.3 1443.5 2515.8 True False 1357.182171385703 1170.0673042840947 2198.793216533885 1404.4845506423337 1249.8416012036412 1120.858479226774 1150.254180106314 1305.708802128116 1394.0819276816917 1117.4123474457106 1891.0574274522733 0.717684271076932 0.6187370554158514 1.1627321225755733 0.7426979901580912 0.6609220762203346 0.5927151988910514 0.6082597828115636 0.6904649130022624 0.7371970345500656 0.5908928683097393 1.0 10.884977460240929 -10.437333472875935 0.8339089560130126 0.9960223085732733 0.7267453387430082 0.0 0.18959043813609192 0.5940893937724623 0.7614775009368286 0.0940061372071522 0.02933085888785845 3.6531417752042485e-11 10.437333472875935 -0.26927696983026517 TEARSS(ph)DEENGPPS(ph)SPDLDR ddPTM_A549_MK2206_60min_R1 2 TEARSSDEENGPPSSPDLDR 20 1 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 T(0.048)EARS(0.449)S(0.503)DEENGPPS(0.528)S(0.472)PDLDR;T(0.076)EARS(0.432)S(0.493)DEENGPPS(0.597)S(0.403)PDLDR 71.297 0.00021757 16810500.0 677.69 745.95 872.38 978.2 1117.4 614.46 683.61 543.73 1188.65 1001.66 1670.46 True False 792.0675040702523 783.9156687899404 996.0966018797477 1217.8590439130671 953.0319402108291 679.4817493544623 807.8130882088323 620.8053926032887 919.4226728840063 775.3843103169173 1255.6386796493862 0.6308084617872893 0.6243162794322601 0.7932987554651384 0.9699120166106476 0.7590017380453313 0.541144327876388 0.6433483623126353 0.49441404017327434 0.732235067129931 0.6175218419788 1.0 10.294205661255159 -10.229152649809551 0.898507474877567 0.9823566024954967 0.6913997451208009 0.0 0.16432970212753495 0.3954257899394104 0.6255218542233659 0.06374522041483688 0.026064458232526577 5.899936673343662e-11 10.229152649809551 -0.2909568573746958 TEARSS(ph)DEENGPPS(ph)SPDLDR ddPTM_A549_PD325901_60min_R1 4 TEARSSDEENGPPSSPDLDR 20 1 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 TEARS(0.418)S(0.582)DEENGPPS(0.945)S(0.055)PDLDR;T(0.003)EARS(0.137)S(0.859)DEENGPPS(0.632)S(0.37)PDLDR;T(0.063)EARS(0.427)S(0.51)DEENGPPS(0.544)S(0.456)PDLDR;T(0.079)EARS(0.43)S(0.482)DEENGPPS(0.532)S(0.476)PDLDR 166.09 3.6091e-28 68845000.0 5014.95 4005.7 3612.1299999999997 4051.3599999999997 5124.61 4876.19 4378.01 4390.120000000001 5040.900000000001 4482.27 4080.71 True False 5524.064032188934 4343.2743970053725 3857.2708633022285 4301.603305893861 4764.67507254475 4836.479925335642 4544.617566288994 4302.555612617487 4829.048503201953 4199.258707251019 3578.8085397520035 1.5435483543838109 1.2136090402048563 1.0778086674537557 1.201965195431199 1.3313579141271754 1.3514218130458553 1.2698688727852194 1.2022312914553501 1.3493453057247333 1.173367801212973 1.0 11.80526364871848 -10.856540633697785 0.9795961159343426 0.9914451166497683 1.2779578921782113 0.233868442623419 0.12298356364451618 0.4392696229970491 0.7105564898122201 0.09201665460470283 0.019839814942057568 1.3914236036182338e-11 10.856540633697785 0.286512775528443 TEARSS(ph)DEENGPPSS(ph)PDLDR ddPTM_A549_MK2206_60min_R1 3 TEARSSDEENGPPSSPDLDR 20 1 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 T(0.001)EARS(0.434)S(0.565)DEENGPPS(0.092)S(0.908)PDLDR;T(0.011)EARS(0.44)S(0.549)DEENGPPS(0.243)S(0.757)PDLDR;T(0.026)EARS(0.458)S(0.516)DEENGPPS(0.253)S(0.747)PDLDR 177.53 2.3048999999999997e-35 69498000.0 2621.18 3693.8 2556.89 2660.65 3477.63 2224.7999999999997 2528.9700000000003 3013.26 4004.7000000000003 4303.4 5370.2 True False 3063.571102301736 3881.798642504567 2919.4954496667847 3312.5093694411185 2966.075233788605 2460.2268592972837 2988.451113482091 3440.398832721727 3097.641844191794 3331.2589511588994 4036.6311300199504 0.7589425448162253 0.9616431418853428 0.7232504917169272 0.8206123529114108 0.7347897636051639 0.6094752728335433 0.7403329700495376 0.8522945797885484 0.7673829350308965 0.8252572117339925 1.0 11.978936043091833 -10.641950548518393 0.694710547826108 1.0171605504432701 0.7720231661680389 0.15193316745952212 0.09725159700388993 0.584076085788247 0.44724574893862434 0.0831980302433291 0.017112233717550926 2.2806017407715202e-11 10.641950548518393 -0.24513738427523124 TEARSS(ph)DEENGPPSS(ph)PDLDR ddPTM_A549_PD325901_60min_R1 2 TEARSSDEENGPPSSPDLDR 20 1 Q96B36-3;Q96B36;Q96B36-2 Q96B36-3 AKT1S1 Proline-rich AKT1 substrate 1 2 TEARS(0.178)S(0.822)DEENGPPS(0.266)S(0.734)PDLDR;T(0.005)EARS(0.146)S(0.64)DEENGPPS(0.574)S(0.634)PDLDR 171.96 6.1242e-35 42553300.0 2273.26 1545.09 1923.6999999999998 2275.93 2233.79 2462.81 2534.4300000000003 2086.02 2427.0299999999997 2794.2700000000004 2625.16 True False 2504.039681714438 1675.3001567938275 2054.253850147835 2416.5090270879427 2076.8962965571504 2442.753691902053 2630.87912054331 2044.4126946489687 2325.0303693241763 2617.839315326898 2302.281962260334 1.0876338010553765 0.7276694098532795 0.8922685769257428 1.0496147156169626 0.9021033611878259 1.0610141294352178 1.1427267222996291 0.8879940546647057 1.0098808084486353 1.137062861213036 1.0 11.168848816935016 -6.232360488394662 13.672746126629717 1.0053927253335888 0.8850196231502776 0.1777957297835029 0.10938317335748467 3.263977946307798 1531.8831735399299 0.012665581072923357 0.03339843019523512 5.856518393467499e-07 6.232360488394662 -0.12037310218331121 TEAS(ph)QEER ddPTM_A549_PD325901_60min_R1 1 TEASQEER 8 0 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4 F8WE42 NOL8 Nucleolar protein 8 1 T(0.003)EAS(0.997)QEER 52.278 0.027458 2340000.0 335.32 469.64 461.0 496.49 446.54 429.9 384.98 292.53 472.71 507.52 585.38 True False 369.3614395504631 509.2182110017232 492.2862322182005 527.1570596893986 415.17657087937044 426.39903693289057 399.6306245691393 286.6952596646544 452.84364259330545 475.47510058609504 513.3819710295578 0.7194671032364657 0.9918895476218528 0.9589082983006766 1.0268320459953348 0.8087089035221823 0.8305687791836008 0.7784274616572593 0.558444347178191 0.882079364191839 0.9261624432049246 1.0 9.003888821950309 -9.922935580893961 1.3042610836072075 0.9790273539903104 0.8455980980875367 0.11730413063322731 0.12677018888860275 0.5452381461684893 1.86402589544839 0.038904822676574365 0.02444146129871121 1.1941652224205562e-10 9.922935580893961 -0.13342925590277366 TEATQGLDYVPSAGT(ph)ISPTSSLEEDKGFK ddPTM_A549_PD325901_60min_R1 1 TEATQGLDYVPSAGTISPTSSLEEDKGFK 29 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 TEATQGLDY(0.007)VPS(0.144)AGT(0.315)IS(0.315)PT(0.073)S(0.073)S(0.073)LEEDKGFK 55.36600000000001 0.0019451 4766400.0 1079.8 1074.7 952.21 890.48 1264.9 1196.7 680.02 1161.7 1339.5 1001.5 1436.0 True False 1189.4205010932535 1165.2687406599787 1016.8326967038879 945.4829271731876 1176.057787668106 1186.9544719646208 705.8985332212222 1138.5289821639794 1283.2054732367264 938.2651190829405 1259.3811035540077 0.9444484260853816 0.9252709425062505 0.8074066649359423 0.7507520356665739 0.9338378862039766 0.9424902983020811 0.56051224782487 0.9040384828317811 1.01891752196018 0.7450208014358249 1.0 10.298499210299326 -8.615799712025204 5.049537075488961 1.0083158172530498 0.8373394012628667 0.0 0.13306519191695224 0.1711174606332855 7.328095901854514 0.017871505241458148 0.020289301929626056 2.4221458346667253e-09 8.615799712025204 -0.1709764159901831 TEATQGLDYVPSAGTIS(ph)PTSSLEEDKGFK ddPTM_A549_PD325901_60min_R1 1 TEATQGLDYVPSAGTISPTSSLEEDKGFK 29 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 TEATQGLDY(0.001)VPS(0.011)AGT(0.039)IS(0.665)PT(0.126)S(0.126)S(0.031)LEEDKGFK 89.266 2.1644000000000002e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TECEGKREDEGEPGDEGQLEDEGS(ph)QEK ddPTM_A549_MK2206_60min_R1 2 TECEGKREDEGEPGDEGQLEDEGSQEK 27 2 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 TECEGKREDEGEPGDEGQLEDEGS(1)QEK;TECEGKREDEGEPGDEGQLEDEGS(1)QEK 251.13 5.241499999999998e-125 31974000.0 2909.8 3648.2 2824.1 2641.4 4126.0 2869.7 2583.3 2966.1 4050.1000000000004 4227.3 4513.2 True False 3400.9031022202203 3833.877797277917 3224.599845673439 3288.5431185769507 3519.070865679149 3173.3697492473107 3052.6521712231793 3386.553758300286 3132.7588166806995 3272.3499940126426 3392.4478820166937 1.0024923655418105 1.130121355025448 0.9505230316925386 0.9693717436336928 1.0373249606379162 0.9354218132780425 0.8998376032260464 0.9982625750132663 0.9234508312677104 0.9645984574617379 1.0 11.728110936434845 -5.780177305753595 24.999924260624933 0.9639093061904174 1.066306876113259 0.4276668750859055 0.04550749259495631 144.18922934976806 192376.1307334902 0.006342737819527857 0.019766714378107203 1.6589095001451658e-06 5.780177305753595 0.10239756992284166 TECEGKREDEGEPGDEGQLEDEGS(ph)QEK ddPTM_A549_PD325901_60min_R1 2 TECEGKREDEGEPGDEGQLEDEGSQEK 27 2 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 TECEGKREDEGEPGDEGQLEDEGS(1)QEK;TECEGKREDEGEPGDEGQLEDEGS(1)QEK 225.53 3.5000999999999994e-96 35132000.0 3482.7999999999997 3307.6 3823.7 4336.1 4132.1 3818.3 3777.3 3868.6000000000004 3436.9 3643.4 4757.5 True False 3836.3712920981493 3586.343060023209 4083.1992757759926 4603.9310490024 3841.875550971131 3787.205030753331 3921.047218517869 3791.4377381420086 3292.4590451416984 3413.3551022134684 4172.357660277291 0.9194732581585989 0.8595483302322803 0.9786311740841094 1.1034363359675228 0.9207924784462997 0.9076894502140156 0.9397677614860276 0.9087039143930996 0.7891123708035338 0.8180878486784904 1.0 12.026647117637658 -6.984059509261016 24.99554523866514 0.9029891793668077 0.9653547073749926 0.1558875638329955 0.07600094209714377 490.1030550437252 768503.575803875 0.013426448934270736 0.025368901352981768 1.037386258084186e-07 6.984059509261016 0.062365528008184956 TEDANEDT(ph)IGVLVR ddPTM_A549_MK2206_60min_R1 2 TEDANEDTIGVLVR 14 0 Q969Z4 Q969Z4 RELT Tumor necrosis factor receptor superfamily member 19L 1 TEDANEDT(1)IGVLVR;T(0.001)EDANEDT(0.999)IGVLVR 108.17 1.672e-05 12821900.0 649.4200000000001 644.44 561.53 343.79 719.56 530.73 633.05 563.97 933.1500000000001 802.19 498.56000000000006 True False 759.0262192053938 677.2392433742062 641.1633976633291 428.0185654333197 613.7136771953678 586.8914963299387 748.0669906680729 643.9144745856885 721.793014934346 620.9747218548486 374.75379244399636 2.0253997011086247 1.8071578114193831 1.7108923527682385 1.1421327123655014 1.637645007387302 1.5660722003704457 1.996155891550757 1.718233377669996 1.9260459253183184 1.6570205142023953 1.0 8.54979926784769 -10.851268408942937 1.0573264750835591 0.993188187528662 1.7246071751531376 0.07789450418839428 0.29774701650706503 0.32359183325458263 0.6323973280237071 0.17792891565337918 0.04180614221996715 1.4084180785166173e-11 10.851268408942937 0.7314189876244755 TEDANEDT(ph)IGVLVR ddPTM_A549_PD325901_60min_R1 2 TEDANEDTIGVLVR 14 0 Q969Z4 Q969Z4 RELT Tumor necrosis factor receptor superfamily member 19L 1 TEDANEDT(1)IGVLVR;T(0.003)EDANEDT(0.997)IGVLVR 86.291 0.00012338 18807400.0 823.3800000000001 580.06 902.72 601.31 849.69 749.28 745.71 893.5799999999999 684.38 762.4 807.9200000000001 True False 906.9689314596808 628.9436919207471 963.9840076963417 638.4515530259065 790.0107056713673 743.1781121029926 774.0884021181695 875.7568459000507 655.6178885955587 714.261933888002 708.5509618268483 1.2800334490002723 0.8876477851348185 1.3605005985891452 0.9010665250948142 1.1149666689245505 1.0488703736804839 1.0924950269241704 1.2359828623224187 0.925293908154732 1.0080600724137458 1.0 9.468727811063104 -8.788095029484987 24.968449395234313 0.9647221079241778 1.1056746127609125 0.1599390034468121 0.13813097099490929 243.24076531406277 227843.40819200143 0.0213095677333791 0.022688970874898753 1.6289395597141217e-09 8.788095029484987 0.14095250483673472 TEDEEFLIQHLLQAPS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 TEDEEFLIQHLLQAPSPPR 19 0 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 TEDEEFLIQHLLQAPS(1)PPR 63.979 0.00017585 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TEDEEFLIQHLLQAPS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 TEDEEFLIQHLLQAPSPPR 19 0 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR 225.98 2.731699999999999e-75 91343000.0 5182.2 4926.3 5127.7 5105.700000000001 6300.8 5893.5 5767.400000000001 5947.5 5389.0 5348.1 5291.7 True False 5708.293129065991 5341.456589851353 5475.696557365002 5421.0674931139865 5858.253544579967 5845.5052899836965 5986.881563042375 5828.8724467765105 5162.51907075231 5010.420053287543 4640.8544468500995 1.2300090844134095 1.1509640414335285 1.1798897423041435 1.16811840474623 1.2623221890865712 1.2595752262713675 1.2900386408597384 1.255991221774421 1.1124070211372996 1.0796330957305242 1.0 12.180174735003526 -9.23738382244301 1.3258502069178022 1.0314125155793097 1.2223860239732782 0.6744588846824964 0.049115529546403004 0.14964167229158085 0.5454647767478445 0.012470433218791155 0.010919388915105221 5.789168329327372e-10 9.23738382244301 0.19097350839396854 TEDFQTPS(ph)PVLR ddPTM_A549_MK2206_60min_R1 2 TEDFQTPSPVLR 12 0 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEDFQT(0.005)PS(0.995)PVLR;TEDFQT(0.007)PS(0.993)PVLR 102.66 0.00020727 2649800.0 2181.8 2063.65 2125.98 2024.61 2507.1400000000003 2015.33 1838.12 2284.5 3022.0 2996.0 2864.6000000000004 True False 2550.034500111374 2168.680970438181 2427.4759321216757 2520.6395408881954 2138.343027188276 2228.590882932215 2172.0826109893337 2608.334870987829 2337.521825142358 2319.201519187631 2153.2407610620003 1.1842774603865809 1.007170684140572 1.1273592698126427 1.1706259636497827 0.9930812502980966 1.0349938210500211 1.008750461289819 1.2113531000134754 1.0855831207604802 1.0770748729667263 1.0 11.072293925751335 -10.4519271535569 0.9260517680555106 1.0029151598181736 1.0876927439502366 0.03213728256019732 0.07559436274340538 0.750072588858247 1.2132872629186813 0.03869862078518585 0.013075087039837058 3.532424159869496e-11 10.4519271535569 0.08477758413206304 TEDGDWEWS(ph)DDEMDEKSEEGK ddPTM_A549_MK2206_60min_R1 4 TEDGDWEWSDDEMDEKSEEGK 21 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 T(0.001)EDGDWEWS(0.999)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;T(0.007)EDGDWEWS(0.993)DDEMDEKSEEGK 141.64 4.666e-22 82162700.0 9307.7 7942.9 6340.09 5306.75 13053.5 9427.0 9127.5 9584.300000000001 12258.800000000001 13378.6 13962.5 True False 10878.612208583107 8347.159683131073 7239.210097218845 6606.903988229058 11133.347441866894 10424.558882863843 10785.848601726304 10942.903875687745 9482.201373280994 10356.364968158765 10495.22590460385 1.0365295904503664 0.7953292057743603 0.6897621988339748 0.6295151765462108 1.0608011245363593 0.9932667460060094 1.0276909425070087 1.0426553916183467 0.903477586806542 0.9867691331556596 1.0 13.357445599818785 -6.773773270813054 24.996437702993497 0.9749894661126963 0.781321399474107 0.48672473457805343 0.10343545197868681 160.72644979855528 325735.85896086856 0.015412393162858118 0.029274793208641427 1.6835527526991088e-07 6.773773270813054 -0.19366806663858938 TEDGDWEWS(ph)DDEMDEKSEEGK ddPTM_A549_PD325901_60min_R1 4 TEDGDWEWSDDEMDEKSEEGK 21 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK 207.44 1.73e-57 426244000.0 33830.6 23849.100000000002 23454.9 22225.6 24291.0 24924.300000000003 22468.899999999998 20655.0 33618.9 27342.6 41881.1 True False 37265.057607228606 25858.94735542374 25046.69055977151 23598.42483400006 22584.883959400704 24721.32476442533 23323.966284953858 20243.01982146597 32206.014545873986 25616.18356968268 36729.99020616697 1.0145675889935792 0.7040281581965143 0.6819138915960333 0.6424838313743378 0.6148894631507061 0.6730555773541866 0.6350115029716986 0.5511305532030107 0.876831558219871 0.6974187421749357 1.0 15.164670890933035 -8.943762371465432 4.695313248300897 0.9478270367150169 0.6834960103295605 0.16885501194633612 0.13586767184777832 0.11877288904795581 5.055303346418636 0.0205892052889081 0.02146630589186893 1.1382499202044413e-09 8.943762371465432 -0.26433102638545636 TEDGGEFEEGAS(ph)ENNAKES(ph)SPEKEAEEGCPEKESEEGCPK ddPTM_A549_PD325901_60min_R1 1 TEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPK 40 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 T(0.003)EDGGEFEEGAS(0.709)ENNAKES(0.644)S(0.644)PEKEAEEGCPEKESEEGCPK 75.163 2.1868e-06 32614000.0 5236.4 5844.4 5411.6 5447.4 5124.1 5414.5 5829.8 6060.3 4268.0 5445.1 5412.6 True False 5767.995473166063 6336.928098923587 5778.863718594391 5783.87352605698 4764.200893185345 5370.4061071717515 6051.65622918897 5939.422562286623 4088.630802369802 5101.295456733421 4746.884513298342 1.2151118185005534 1.3349657193409183 1.2174013718692693 1.2184567603980094 1.0036479463189996 1.1313538579096711 1.2748690666973939 1.2512254186187592 0.86132931840148 1.0746618002696717 1.0 12.212765235605227 -8.758074719892473 24.9996818975004 0.9345166167653729 1.2040597022500084 0.5173176762538645 0.09516425420442351 41.204568529854335 306152.64793334156 0.016637558320202993 0.01849208997157688 1.7455218119584723e-09 8.758074719892473 0.26954308548463546 TEDGGEFEEGAS(ph)ENNAKESSPEKEAEEGCPEKESEEGCPK ddPTM_A549_MK2206_60min_R1 1 TEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPK 40 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 T(0.003)EDGGEFEEGAS(0.359)ENNAKES(0.318)S(0.318)PEKEAEEGCPEKES(0.002)EEGCPK 43.302 0.0050988 18316000.0 1312.9 1456.3 1570.6 1143.2 1121.0 1004.9 1160.3 1325.9 1490.8 1650.7 1549.5 True False 1534.4854226767914 1530.4194496397756 1793.3346969352021 1423.2840513201986 956.10238497972 1111.2378510013664 1371.1114908335292 1513.8503853984519 1153.1361803184084 1277.8057235390602 1164.7163859755535 1.317475602776485 1.3139846473078622 1.5397179249205162 1.222000538893485 0.8208885841156079 0.9540845002112732 1.177206320219408 1.2997588113525744 0.9900574888474282 1.097096030351444 1.0 10.185762979146961 -6.532257880458785 10.779942305816288 1.0194135035239094 1.3825097890843057 0.5647492704373549 0.13076223285421826 0.12715657824054602 138.29227085547453 0.018949216067586615 0.040018649728728685 2.9359058177685506e-07 6.532257880458785 0.3630962855603963 TEDGGEFEEGASENNAKES(ph)SPEKEAEEGCPEK ddPTM_A549_MK2206_60min_R1 2 TEDGGEFEEGASENNAKESSPEKEAEEGCPEK 32 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 TEDGGEFEEGAS(0.038)ENNAKES(0.481)S(0.481)PEKEAEEGCPEK;TEDGGEFEEGAS(0.003)ENNAKES(0.498)S(0.498)PEKEAEEGCPEK 98.34200000000001 2.0827000000000002e-10 26404000.0 2128.2 2891.6000000000004 2766.8999999999996 2700.4 4283.1 2759.1000000000004 2198.6 2591.6 3831.3 3636.2 4769.1 True False 2487.3881305055575 3038.7700889778043 3159.2880255634855 3361.998121225562 3653.0616637882617 3051.066130657649 2598.0571608606365 2958.967236442134 2963.5166673288936 2814.779894549423 3584.800849535989 0.6938706597404207 0.8476817029797172 0.8813008471509425 0.93784794813936 1.0190417312194926 0.8511117517316406 0.7247423971116624 0.8254202564209775 0.8266893452986339 0.7851984008857182 1.0 11.807677258159032 -10.717066561375821 0.9686582380342408 1.0001717794254423 0.8498529463672558 0.0 0.10514637445758133 0.5949429410467678 0.9904608012482812 0.06147345756100411 0.01589508032756413 1.9183747018317113e-11 10.717066561375821 -0.1503188330581865 TEDGGEFEEGASENNAKES(ph)SPEKEAEEGCPEK ddPTM_A549_PD325901_60min_R1 1 TEDGGEFEEGASENNAKESSPEKEAEEGCPEK 32 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 TEDGGEFEEGAS(0.022)ENNAKES(0.489)S(0.489)PEKEAEEGCPEK 74.03 4.1129e-06 10072000.0 2122.6 2350.8 2045.6 2409.9 1961.1 2255.8 2038.4 2347.6 2026.8 2125.7 2398.2 True False 2338.084789424469 2548.9101661333166 2184.4267171920824 2558.7540497199975 1823.3591014277183 2237.429512708106 2115.9724274552805 2300.7752763434264 1941.6206443868593 1991.482939225769 2103.2366034423535 1.1116603741099509 1.2118989190096503 1.0386024632781903 1.2165792690808546 0.866930091670827 1.0638030495694681 1.0060553453625152 1.0939212795069098 0.9231584507463505 0.9468658618656227 1.0 11.038395439730515 -6.753505119639232 24.999949113154173 0.978322327088825 1.1419088886562834 0.5137146275025184 0.0741076816602392 106.29317461797133 334914.93338169175 0.010212279339675152 0.020961978732945533 1.763984969784647e-07 6.753505119639232 0.16358656156745832 TEDGGEFEEGASENNAKES(ph)SPEKEAEEGCPEKESEEGCPK ddPTM_A549_PD325901_60min_R1 3 TEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPK 40 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 TEDGGEFEEGASENNAKES(0.5)S(0.5)PEKEAEEGCPEKESEEGCPK;TEDGGEFEEGAS(0.003)ENNAKES(0.499)S(0.499)PEKEAEEGCPEKESEEGCPK;T(0.001)EDGGEFEEGAS(0.099)ENNAKES(0.45)S(0.45)PEKEAEEGCPEKESEEGCPK 237.47 2.5190999999999992e-144 319646000.0 7058.6 7266.900000000001 8756.7 8616.1 7750.9 9870.1 7928.4 9077.2 6250.6 9480.2 8445.5 True False 7775.183875733322 7879.3071661877675 9350.982320314786 9148.29692841714 7206.503523153389 9789.721178021231 8230.119600586948 8896.148125074353 5987.909019047019 8881.618554098945 7406.757040435501 1.0497419900891143 1.063799868575746 1.2624934595890254 1.2351285290544969 0.972963401365959 1.3217284061805297 1.1111637057428085 1.201085451636642 0.8084386981181366 1.199123787321735 1.0 12.854626298749631 -8.753627305214922 24.99944786041101 0.9095404940255062 1.1540530766307031 0.1009068928291047 0.13637584150639115 105.4263328465707 337374.8049952147 0.01905515880505357 0.021413139048703858 1.763488755323092e-09 8.753627305214922 0.24451258260519693 TEDGGWEWS(ph)DDEFDEESEEGK ddPTM_A549_PD325901_60min_R1 2 TEDGGWEWSDDEFDEESEEGK 21 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 T(0.002)EDGGWEWS(0.998)DDEFDEESEEGK;TEDGGWEWS(1)DDEFDEESEEGK 128.98 6.4261e-18 8017800.0 3597.8 2760.9 2475.67 2630.5 3321.0 2617.6 2519.67 2311.7 2928.2 2974.6000000000004 4402.6 True False 3963.046007439627 2993.5707323793918 2643.683853613086 2792.9800107010483 3087.7444168280326 2596.2831334625125 2615.557420666328 2265.5913300064326 2805.137937089795 2786.783248351587 3861.108110380833 1.0264012024902198 0.7753138857549696 0.6846956309007186 0.7233622915639024 0.7997042114740162 0.6724191758532327 0.6774110814546314 0.5867723112738665 0.7265111094786506 0.7217573734491258 1.0 11.91479923472707 -10.540715188398952 0.9272420235282135 0.9943149956830464 0.7355619401240789 0.0 0.13237752933432745 0.3931745787250031 0.6239672224929627 0.06417284014106436 0.01970456589695294 2.879286039982862e-11 10.540715188398952 -0.25875305555896744 TEDGGWEWS(ph)DDEFDEESEEGKAAISQLR ddPTM_A549_PD325901_60min_R1 2 TEDGGWEWSDDEFDEESEEGKAAISQLR 28 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TEDGGWEWS(1)DDEFDEESEEGKAAISQLR;TEDGGWEWS(1)DDEFDEESEEGKAAISQLR 199.97 1.0929999999999998e-77 81089000.0 4469.1 3206.3 3767.2 3015.4 3967.0 3944.7000000000003 3152.7 4064.9 5489.0 3856.7 5609.1 True False 4922.799742022468 3476.5061535108302 4022.864846013894 3201.6544095297218 3688.3716054070496 3912.575671061116 3272.677723723637 3983.8223806476394 5258.316418511679 3613.1873038114595 4919.216259014478 1.0007284662473261 0.706719520033323 0.8177857272775887 0.6508464440169063 0.7497884645034862 0.7953656568546482 0.6652843769017972 0.8098490025412632 1.0689337775861754 0.7345046677283771 1.0 12.264212765002783 -8.691916008108533 5.226804050026549 1.0325224617273356 0.7633804598727676 0.13331620263840027 0.12719210477980764 0.08544332150048065 4.360529133382806 0.014482335632555412 0.016329218019533385 2.032750103697857e-09 8.691916008108533 -0.26914200185456805 TEDS(ph)IRDYEDGMEVDTTPTVAGQFEDADVDH ddPTM_A549_PD325901_60min_R1 4 TEDSIRDYEDGMEVDTTPTVAGQFEDADVDH 31 1 P54105;E9PMI6;J3KN38 P54105 CLNS1A Methylosome subunit pICln 1 T(0.063)EDS(0.838)IRDY(0.059)EDGMEVDT(0.019)T(0.019)PT(0.003)VAGQFEDADVDH;T(0.034)EDS(0.945)IRDY(0.02)EDGMEVDT(0.001)TPTVAGQFEDADVDH;T(0.135)EDS(0.856)IRDY(0.005)EDGMEVDT(0.002)T(0.002)PT(0.001)VAGQFEDADVDH;T(0.187)EDS(0.812)IRDYEDGMEVDT(0.001)TPTVAGQFEDADVDH 80.23899999999999 2.0456e-06 13728900.0 1760.6 2265.16 1671.6299999999999 1717.01 2010.06 2013.45 1712.4699999999998 2287.87 1808.52 2044.8600000000001 2349.48 True False 1939.3348159147831 2456.05298277971 1785.0768641277884 1823.0658080873623 1868.8803199305512 1997.0531307572196 1777.6389829495397 2242.2366380507065 1732.5141936977122 1915.7471906220085 2060.508854580828 0.9411921776523036 1.19196429431474 0.8663281694515838 0.8847648502137745 0.9069994121965275 0.9692038577351723 0.862718439184367 1.0881955848264713 0.8408186113085934 0.9297447018308161 1.0 11.008784947956501 -5.778993785104511 24.991104812520526 0.9263541345923315 1.0665783418399177 0.27804129750217577 0.08632948129005523 197.01834644398278 280483.4559120874 0.011900493615488904 0.0371175148916448 1.6634364545173043e-06 5.778993785104511 0.14022420724758622 TEDSIRDYEDGMEVDT(ph)TPTVAGQFEDADVDH ddPTM_A549_PD325901_60min_R1 3 TEDSIRDYEDGMEVDTTPTVAGQFEDADVDH 31 1 P54105;E9PMI6;J3KN38 P54105 CLNS1A Methylosome subunit pICln 1 TEDSIRDY(0.001)EDGMEVDT(0.389)T(0.389)PT(0.221)VAGQFEDADVDH;TEDS(0.001)IRDYEDGMEVDT(0.474)T(0.474)PT(0.051)VAGQFEDADVDH;TEDS(0.001)IRDY(0.002)EDGMEVDT(0.475)T(0.475)PT(0.047)VAGQFEDADVDH 74.446 6.7086000000000004e-06 8633100.0 2549.8 2490.81 2795.7 2490.19 3085.87 2406.41 2846.5299999999997 2872.13 3047.38 2699.02 2793.29 True False 2808.653818936449 2700.719300198455 2985.433013909809 2644.003380668179 2869.1291368735683 2386.8129948026935 2954.856256830982 2814.8431140076023 2919.309216149412 2528.6034165823667 2449.7330381242164 1.1465142426650137 1.102454536134444 1.2186768792552933 1.0793026585022167 1.1712007358444607 0.9743155509835875 1.2061952101905533 1.1490407608508044 1.1916846328629973 1.0321954993587963 1.0 11.258408823457575 -10.916898096813515 1.1616388496208816 0.9997188104024324 1.140449821900827 0.33369378752414547 0.065836896536667 0.3926579138091738 0.9381956006217969 0.044318551563283466 0.010408116655397816 1.2108822225424525e-11 10.916898096813515 0.14073101149839462 TEDSSVPET(ph)PDNER ddPTM_A549_MK2206_60min_R1 2 TEDSSVPETPDNER 14 0 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 TEDSSVPET(1)PDNER;TEDS(0.001)S(0.001)VPET(0.998)PDNER 111.39 9.7717e-06 2328400.0 651.6600000000001 853.5999999999999 558.23 651.72 1137.84 739.39 779.86 642.76 904.12 904.37 1098.52 True False 761.6442764426519 897.0445939796138 637.395408041601 811.3914292568224 970.4652432875332 817.6317590326403 921.5504673286528 733.8731983699438 699.3382635829616 700.0721888877571 825.7271663903613 0.9223921743693554 1.0863692397344926 0.7719201135502828 0.9826386514613452 1.1752855940660032 0.9901960263786527 1.116047170104842 0.8887599055000769 0.846936242439613 0.8478250654487962 1.0 9.689521360381978 -8.318247092305308 24.999426385192244 0.9227782973237945 1.0054219375601738 0.18016161531199415 0.10799937263346866 490.86113210050894 216012.6206338563 0.01841045125766794 0.022257163128350778 4.805658522036847e-09 8.318247092305308 0.08264364023637938 TEDSSVPET(ph)PDNER ddPTM_A549_PD325901_60min_R1 2 TEDSSVPETPDNER 14 0 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 TEDS(0.013)S(0.01)VPET(0.977)PDNER;T(0.002)EDS(0.006)S(0.006)VPET(0.985)PDNER 107.37 1.8444e-05 3988000.0 767.46 764.85 488.56000000000006 729.38 764.63 746.6400000000001 816.75 724.97 616.01 862.03 854.0799999999999 True False 845.3719742258093 829.3065937413085 521.7166195499435 774.4321460578335 710.925026630298 740.5596113877027 847.831868192749 710.5099046220372 590.1212419324793 807.60127868504 749.0335744591971 1.128616931271964 1.1071687865795181 0.6965196719340964 1.0339084554613913 0.9491230445091684 0.9886868047568994 1.131901021666331 0.9485688343610311 0.7878435120328849 1.0781910267081538 1.0 9.548886576843516 -8.522976987528763 24.999999857215045 0.8981513685143063 0.998701814975778 0.0 0.13363865986374998 6.14126355742926 1562453.5420401455 0.022425407371562817 0.025555141316482177 2.9993214433412527e-09 8.522976987528763 0.10055044646147171 TEEAAADGGGGMQNEPLT(ph)PGYHGFPAR ddPTM_A549_MK2206_60min_R1 2 TEEAAADGGGGMQNEPLTPGYHGFPAR 27 0 O43251-6;O43251-8 O43251-6 1 TEEAAADGGGGMQNEPLT(0.999)PGY(0.001)HGFPAR;TEEAAADGGGGMQNEPLT(0.999)PGY(0.001)HGFPAR 92.865 1.6427999999999997e-09 14995900.0 2135.0 2024.4099999999999 1747.63 1508.1799999999998 2809.3 2041.31 1869.83 2195.3 3438.5 3009.3 3049.5 True False 2495.335804261518 2127.4438220457732 1995.4702129153638 1877.6841677047732 2396.055691457207 2257.3200692880887 2209.553907528448 2506.4904978242866 2659.6852401561905 2329.4970399503827 2292.2249880816057 1.0886085865200774 0.9281130050965285 0.8705385480442738 0.8191535200374168 1.0452969075529095 0.9847724726084897 0.9639341334367241 1.093474903579165 1.160307235976045 1.016260206595152 1.0 11.162532940126633 -8.219946120187242 5.584966281635307 1.0791823482267109 0.9512221414069928 0.3002162140236746 0.08003494225046423 0.19065331962130436 15.678555152449007 0.014588875886391952 0.01874343991676351 6.0263434597348e-09 8.219946120187242 -0.1279602068197181 TEEAAADGGGGMQNEPLT(ph)PGYHGFPAR ddPTM_A549_PD325901_60min_R1 1 TEEAAADGGGGMQNEPLTPGYHGFPAR 27 0 O43251-6;O43251-8 O43251-6 1 TEEAAADGGGGMQNEPLT(0.97)PGY(0.03)HGFPAR 68.579 7.0158e-05 9689100.0 2892.5 3239.4 3846.4 3568.9 2794.6 3444.9 3784.5 3217.6 2745.7 3518.6 4163.9 True False 3186.1444706540447 3512.395606675288 4107.43983428218 3789.3428474400203 2598.31693684662 3416.845876552954 3928.5212184578604 3153.422443841632 2630.307777428951 3296.4349955119683 3651.7666971368594 0.8724939830225511 0.96183461266273 1.1247815577875189 1.0376738608222225 0.7115232577381823 0.9356692691326384 1.075786473856062 0.863533381339517 0.7202836313423923 0.9026959466212652 1.0 11.834378882504687 TEEARPSPAPGPGT(ph)PTGTPTR ddPTM_A549_MK2206_60min_R1 1 TEEARPSPAPGPGTPTGTPTR 21 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 TEEARPSPAPGPGT(0.963)PT(0.037)GTPTR 159.05 6.072099999999999e-28 75052000.0 2190.2 1948.6 2175.3 2354.1 2813.9 2282.1 2417.9 2707.4 3700.0 3286.8 3168.5 True False 2559.8522147510917 2047.7754168564622 2483.7902497409564 2930.854605679563 2399.9790375507896 2523.590307264621 2857.2011321954587 3091.182241064761 2861.95590768588 2544.309597218262 2381.674003848687 1.0748121743842676 0.8598050839650354 1.0428758283993753 1.2305859664015406 1.007685784734822 1.0595867877747347 1.1996608803632822 1.2979031706562436 1.201657280996928 1.0682862529073092 1.0 11.217760239754595 -5.999043073762512 24.939857858911065 1.11817926422428 0.963316554357522 0.28408753690410915 0.10170689547391727 35.655935638328266 929153.371292543 0.015795305806146707 0.04852607924039803 1.0022058333682255e-06 5.999043073762512 -0.1548627098667581 TEEARPSPAPGPGT(ph)PTGTPTR ddPTM_A549_PD325901_60min_R1 2 TEEARPSPAPGPGTPTGTPTR 21 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 TEEARPSPAPGPGT(0.943)PT(0.056)GT(0.001)PTR;TEEARPSPAPGPGT(0.991)PT(0.008)GTPTR 235.33 2.8988999999999994e-86 207237000.0 12273.5 11792.4 13001.2 13094.9 14405.3 14116.8 13037.099999999999 13410.5 13901.9 13292.9 13692.599999999999 True False 13519.49668472685 12786.186933431403 13883.539614566735 13903.742232324319 13393.521423587134 14001.837461210116 13533.233974674857 13143.017057166267 13317.651488159505 12453.584025419495 12008.4970045429 1.12582754358121 1.064761637413433 1.1561429885284138 1.1578253487563377 1.1153370333123511 1.1659941669563745 1.1269715077211693 1.0944764404899439 1.109019012381095 1.0370643404173074 1.0 13.551767972742532 -10.409076400192115 0.5130129275785728 0.984615096292113 1.1300539958028173 0.6659862936665841 0.028915788582512442 0.47001059701949816 0.19677112732614482 0.032511124263761945 0.006925694922423428 3.8987339491761396e-11 10.409076400192115 0.14543889951070432 TEEGEIDYS(ph)AEEGENR ddPTM_A549_MK2206_60min_R1 2 TEEGEIDYSAEEGENR 16 0 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 TEEGEIDY(0.44)S(0.56)AEEGENR;TEEGEIDYS(1)AEEGENR 213.34 2.7708999999999997e-46 6375100.0 1049.19 959.51 653.9200000000001 976.39 1174.5900000000001 901.3900000000001 1213.66 1429.78 1320.88 1166.26 1356.1100000000001 True False 1226.2676217672802 1008.3449606014285 746.655688921347 1215.605593831813 1001.8093669699642 996.7744915057433 1434.166312130501 1632.4556935176086 1021.7027890119253 902.8010559972524 1019.3504602680276 1.2029892265363238 0.989203419142318 0.7324818284037676 1.1925295972419359 0.9827918915213408 0.9778525937425405 1.4069413494485516 1.6014665781269881 1.0023076741862453 0.8856630679892666 1.0 9.993434430733995 TEEGEIDYS(ph)AEEGENR ddPTM_A549_PD325901_60min_R1 2 TEEGEIDYSAEEGENR 16 0 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 TEEGEIDY(0.082)S(0.918)AEEGENR;TEEGEIDYS(1)AEEGENR 149.44 1.1869e-14 8391600.0 938.8499999999999 921.4300000000001 837.6700000000001 837.43 703.07 1044.84 1009.62 850.3499999999999 884.34 786.1800000000001 874.71 True False 1034.161360855159 999.0821398588668 894.5193235189147 889.1561491584782 653.688788659827 1036.3311694555978 1048.0416415852624 833.3891021633301 847.1742651751898 736.5404606296821 767.1262152435423 1.3480980577972297 1.3023699620820344 1.1660653823894265 1.1590741282074353 0.8521267761033274 1.350926547499866 1.3661919261259203 1.0863780765186744 1.1043479525807032 0.960129436322092 1.0 9.583320153585701 -2.000000000021182 0.02443246855253586 2.028599994951676e-14 2.75999003534522 0.2977063045044698 0.1391164843654104 1615.059839581758 2.952082358008756 114.65937843819769 240.70986496213175 0.009999999999512262 2.000000000021182 2.7599900353451994 TEEGEIDYS(ph)AEEGENRR ddPTM_A549_MK2206_60min_R1 4 TEEGEIDYSAEEGENRR 17 1 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 TEEGEIDY(0.005)S(0.995)AEEGENRR;TEEGEIDY(0.422)S(0.578)AEEGENRR;TEEGEIDY(0.179)S(0.82)AEEGENRR;TEEGEIDY(0.224)S(0.776)AEEGENRR 92.31 2.0286e-06 94573000.0 900.03 975.1400000000001 502.899 821.22 1490.1100000000001 799.02 465.15000000000003 763.51 1273.1000000000001 1014.28 965.2199999999999 True False 1051.933060379154 1024.7704608403012 574.2176402355894 1022.4189368659669 1270.9167929367802 883.5717660534496 549.6617340008753 871.7398806513099 984.7448827229439 785.1534435519461 725.5292352832038 1.449883766528776 1.4124454412099483 0.7914465914132995 1.4092043258144862 1.75170996719476 1.2178306856353698 0.7576010824516531 1.2015227481647024 1.3572780183538127 1.0821802973183687 1.0 9.50288993879908 -7.513277576664266 24.98403511719745 1.1409854475704835 1.3513353623052098 0.20293191381347153 0.25429690255642257 801.9260855255139 2086763.0842966505 0.041517112535974114 0.06362422179205754 3.067061068462892e-08 7.513277576664266 0.2103499147347263 TEEGEIDYS(ph)AEEGENRR ddPTM_A549_PD325901_60min_R1 4 TEEGEIDYSAEEGENRR 17 1 B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 TEEGEIDY(0.08)S(0.92)AEEGENRR;TEEGEIDY(0.06)S(0.94)AEEGENRR;TEEGEIDY(0.003)S(0.997)AEEGENRR;TEEGEIDY(0.075)S(0.925)AEEGENRR 92.492 1.9823e-06 87247300.0 793.6400000000001 1139.67 1149.45 846.0799999999999 1217.18 1286.88 1285.94 1175.48 1230.3 1312.38 1216.0299999999997 True False 874.2097485531114 1235.7139905722129 1227.4585892043615 898.3404400129034 1131.689475843043 1276.4000759437047 1334.877150393368 1152.0341292537796 1178.594769483497 1229.5161028278285 1066.4660190492898 0.8197258355521099 1.1586998258733088 1.1509589309733375 0.8423526150544737 1.0611584950938213 1.1968502072682656 1.2516827789631362 1.0802351961300842 1.105140481207423 1.152888212907047 1.0 10.058622282286096 -5.248723292739592 23.870988061914698 1.0734622023689881 0.819725531337558 0.337110643289123 0.10727025221502244 1033.2549420298844 1939588.8014494863 0.014897018274275163 0.35225037347155697 5.6399688748519455e-06 5.248723292739592 -0.25373667103143016 TEEGQAS(ph)PVK ddPTM_A549_MK2206_60min_R1 1 TEEGQASPVK 10 0 S4R3B8;Q3KQV3 S4R3B8 ZNF792 Zinc finger protein 792 1 TEEGQAS(1)PVK 62.088 0.01048 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TEEGQAS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 TEEGQASPVK 10 0 S4R3B8;Q3KQV3 S4R3B8 ZNF792 Zinc finger protein 792 1 TEEGQAS(1)PVK 84.169 0.00010363 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TEELIES(ph)PK ddPTM_A549_MK2206_60min_R1 1 TEELIESPK 9 0 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 T(0.003)EELIES(0.997)PK 51.092 0.026768 1332000.0 1119.4 951.07 645.0 952.02 1276.5 1119.1 1136.8 860.09 1607.7 1232.0 1396.8 True False 1308.3273532975857 999.4754006515836 736.4706987923121 1185.2649427378012 1088.7285409693252 1237.5224192015412 1343.341845022456 982.010391415155 1243.558516969348 953.69034433884 1049.936010281157 1.2461019914415883 0.9519393476026594 0.7014434132943934 1.1288925526236644 1.0369475189995438 1.1786646110653463 1.2794511588022677 0.935304991732008 1.1844136259659688 0.9083318745143869 1.0 10.036085688302823 TEELIES(ph)PKLES(ph)SEGEIIQTVDR ddPTM_A549_PD325901_60min_R1 1 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 2 TEELIES(1)PKLES(0.521)S(0.465)EGEIIQT(0.014)VDR 85.98200000000001 2.6001999999999997e-06 8204500.0 732.4 880.64 685.84 743.51 955.14 1011.7 719.65 556.77 832.36 641.37 1005.1 True False 806.752708835617 954.8546234063484 732.385226690956 789.4349240662744 888.0542614541187 1003.4610506280659 747.0366745575908 545.6647855723844 797.3788038098703 600.8737887431108 881.4790718538537 0.91522616315657 1.0832413994789205 0.8308594611902289 0.8955798830322771 1.0074592690969242 1.1383832953829178 0.8474808970637104 0.6190331716268515 0.9045918720825548 0.6816654052595972 1.0 9.783782507146524 TEELIES(ph)PKLESS(ph)EGEIIQTVDR ddPTM_A549_PD325901_60min_R1 1 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 2 TEELIES(1)PKLES(0.185)S(0.815)EGEIIQTVDR 115.18 1.1067e-15 6589600.0 1011.0 895.75 824.2 863.63 1151.5 942.28 1131.8 1316.9 1038.0 959.15 1265.8 True False 1113.635975741137 971.2379961348981 880.1351683172246 916.9744636539613 1070.6226124593434 934.6063840919383 1174.8712683447245 1290.6333964119356 994.3764697422343 898.5891053104365 1110.1146245673144 1.0031720608808257 0.8748988389495853 0.792832693885347 0.8260178213681018 0.9644252843499258 0.8419007942141259 1.0583332949087578 1.162612731919446 0.8957421582746998 0.8094561457206966 1.0 10.116492933991529 -7.744289405422175 24.999199594985946 0.9761093188557964 0.8803598667583052 0.19925547433312085 0.10028145612891629 316.455855946816 461290.79654865485 0.014546025597368561 0.021545308397528343 1.8018166450338255e-08 7.744289405422175 -0.0957494520974912 TEELIES(ph)PKLESSEGEIIQTVDR ddPTM_A549_MK2206_60min_R1 3 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 TEELIES(0.999)PKLES(0.001)SEGEIIQTVDR;TEELIES(0.583)PKLES(0.043)S(0.043)EGEIIQT(0.33)VDR;TEELIES(0.692)PKLES(0.288)S(0.02)EGEIIQTVDR 309.5 5.330299999999998e-176 275068700.0 16046.1 17607.100000000002 16922.01 18093.13 24517.1 19146.14 16652.11 18852.93 24840.82 24178.61 23219.32 True False 18754.28939052026 18503.226183995404 19321.805472357366 22525.947662231465 20910.66706760598 21172.171826620848 19677.582838596838 21525.390562176653 19214.413932638257 18716.64520822605 17453.322023368753 1.0745398134183055 1.0601549756098527 1.1070560347472445 1.2906395488532687 1.198090944498021 1.213074038184411 1.1274405418206321 1.2333119467661051 1.100902963167214 1.0723829642956109 1.0 14.091214041227847 -9.614868715479448 0.9450356709432725 1.0169370995426241 1.1628052838892846 0.30310652958807494 0.07000924279728524 0.34534502562299446 0.6463210108881083 0.02259941292234847 0.014911885314337573 2.427343755105402e-10 9.614868715479448 0.1458681843466605 TEELIES(ph)PKLESSEGEIIQTVDR ddPTM_A549_PD325901_60min_R1 2 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 TEELIES(1)PKLESSEGEIIQTVDR;TEELIES(1)PKLESSEGEIIQTVDR 172.18 5.514e-41 469240000.0 6600.0 7207.299999999999 7340.3 7258.5 9505.7 8575.2 7764.1 7397.3 7602.5 8565.8 9277.0 True False 7270.0271413367955 7814.68446502155 7838.456898809663 7706.841059750446 8838.05242488475 8505.366414298498 8059.567074178539 7249.7550484304165 7282.993363405907 8024.953926151429 8135.987811748279 0.8935641632647181 0.9605083790486055 0.9634302656514573 0.9472532700481496 1.0862912567448415 1.0454005845506358 0.9906070732481447 0.8910725060283213 0.895157850763904 0.9863527468125607 1.0 12.990101802605842 -5.260335199148496 4.8191610535035485 0.9640440156255484 0.889634455759407 0.12024242732248869 0.05593169518260354 0.3680300098586687 24.485693042015328 0.008905315975218025 0.09146671131711684 5.491168883553372e-06 5.260335199148496 -0.0744095598661414 TEELIESPKLES(ph)SEGEIIQTVDR ddPTM_A549_MK2206_60min_R1 1 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 TEELIESPKLES(0.414)S(0.414)EGEIIQT(0.172)VDR 58.477 0.00064199 2803000.0 835.89 1129.0 1013.9 573.55 1338.6 1021.2 1213.3 1090.6 1431.0 1478.7 1665.1 True False 976.967796451598 1186.461277651107 1157.6862659000396 714.0697757476379 1141.6937132326982 1129.2627061823014 1433.740904790416 1245.1958898224236 1106.8807848374304 1144.6606429982482 1251.6097155778596 0.7805690418442771 0.9479482804296753 0.9249578774366927 0.5705211192116361 0.9121802899281475 0.90224827446384 1.1455175578662455 0.9948755385360086 0.8843657659899126 0.9145507810873507 1.0 10.289569047268225 -6.987553013197347 24.999603628935844 0.9600266066464715 0.8142247934858274 0.32213551619553926 0.1124189161206558 245.86320999210267 493809.7586138464 0.0165162282617901 0.031198740932537914 1.0290749030315743e-07 6.987553013197347 -0.1458018131606441 TEELIESPKLES(ph)SEGEIIQTVDR ddPTM_A549_PD325901_60min_R1 1 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 TEELIESPKLES(0.563)S(0.437)EGEIIQTVDR 102.6 1.1852e-10 11199000.0 1257.6 1387.0 1535.1 1624.2 1248.9 1381.7 1435.5 1710.0 1660.7 1622.2 1589.9 True False 1385.270626203812 1503.8873576769233 1639.281117306202 1724.5231451741656 1161.1815724711025 1370.4478933011742 1490.1287380357405 1675.892708530952 1590.9065542398143 1519.774015153616 1394.352379206488 0.9934867590588226 1.0785561670807853 1.1756577044312864 1.2367914817598509 0.8327748349609583 0.9828562089025749 1.0686887764223258 1.2019147623821502 1.1409644921645872 1.0899497414122132 1.0 10.445379488257391 -11.074521526237692 1.4390566538503047 1.0006678402210434 1.0874258659607892 0.0 0.1121833040056597 0.9632821221897495 3.6059230320230498 0.07841976827155242 0.01788906220410578 8.423226398447522e-12 11.074521526237692 0.08675802573974578 TEELIESPKLESS(ph)EGEIIQTVDR ddPTM_A549_PD325901_60min_R1 1 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 TEELIESPKLES(0.439)S(0.561)EGEIIQTVDR 110.61 3.2758e-11 7611500.0 1231.3 1280.3 1371.4 1296.6 1683.8 1251.0 1484.3 1661.8 1251.0 1335.4 1639.7 True False 1356.3006695648482 1388.1953742132403 1464.4714508981351 1376.6880372077464 1565.5356967946532 1240.812270767729 1540.7858487401245 1628.654095343119 1198.4248204696871 1251.082616099211 1438.027294914699 0.9431675423416086 0.9653470272242539 1.0183891891878205 0.9573448585267701 1.088668971952662 0.862857245586101 1.0714579995726166 1.132561322794452 0.8333811358850287 0.869999213869875 1.0 10.489875344211454 -8.781160378606883 24.999545604438122 0.9213188920699614 1.0027816404048848 0.23538001226901384 0.08109225769769597 339.3978616654163 430239.77155010134 0.015432025888300399 0.01644003173921095 1.6551586246999254e-09 8.781160378606883 0.0814627483349234 TEES(ph)PAS(ph)DEAGEK ddPTM_A549_PD325901_60min_R1 2 TEESPASDEAGEK 13 0 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 2 T(0.076)EES(0.924)PAS(1)DEAGEK;T(0.003)EES(0.998)PAS(1)DEAGEK 73.92699999999999 0.0013662000000000001 5403300.0 2922.3999999999996 2910.2 2731.1 2928.2 3187.1 2758.8 2346.21 2297.3 3022.4 3052.1 3319.8 True False 3219.0798966428265 3155.4527673477887 2916.4488694384513 3109.0682635752905 2963.249090898111 2736.3332474772255 2435.4963054453747 2251.4785493030136 2895.3790386791206 2859.3898851253543 2911.485645946099 1.1056485547593258 1.0837947189406156 1.0017047047782164 1.0678631604810769 1.0177790486530773 0.9398408854555912 0.8365132449945328 0.7733091703329991 0.994467907719413 0.9821068117257312 1.0 11.507539790752894 -7.019020953162377 3.6725910680446328 0.9618287375492942 1.0610024789327244 0.4016594901203039 0.07436489226090191 0.2811790225901595 8.162125137473048 0.012945786172699083 0.024220330007263525 9.571478912031686e-08 7.019020953162377 0.09917374138343016 TEES(ph)PAS(ph)DEAGEKEAK ddPTM_A549_MK2206_60min_R1 2 TEESPASDEAGEKEAK 16 1 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 2 T(0.023)EES(0.977)PAS(1)DEAGEKEAK;T(0.077)EES(0.929)PAS(0.994)DEAGEKEAK 88.176 3.6800999999999997e-06 16129700.0 4753.4 4681.9 4741.6 4339.0 7124.5 5355.299999999999 4756.3 5581.5 7015.1 6661.3 6591.7 True False 5555.657710527731 4920.188711988235 5414.030178904848 5402.055194785112 6076.495487768085 5921.994291439561 5620.458143455582 6372.694717626867 5426.191050812764 5156.507703526228 4954.798968334983 1.1212680365102 0.9930148010912381 1.092684125734406 1.0902672801274973 1.2263858789431445 1.1952037467686796 1.1343463537823992 1.2861661509081073 1.0951384880578088 1.0407097717748632 1.0 12.274610808618803 -9.76427968624384 1.1997601161842233 1.0180224424280522 1.1373713133289323 0.2638933818467687 0.07482712417892885 0.3838909393135428 1.1237154197605346 0.022770316624492477 0.015161934802586497 1.72076004624013e-10 9.76427968624384 0.11934887090088009 TEES(ph)PAS(ph)DEAGEKEAK ddPTM_A549_PD325901_60min_R1 2 TEESPASDEAGEKEAK 16 1 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 2 T(0.066)EES(0.942)PAS(0.992)DEAGEKEAK;T(0.018)EES(0.983)PAS(0.999)DEAGEKEAK 91.725 2.7097e-06 26949000.0 6957.6 7112.6 6994.0 7419.8 8199.2 7320.1 7581.0 7223.200000000001 7828.7 7666.0 7945.4 True False 7663.930430085587 7712.00376367187 7468.654898338594 7878.104194411568 7623.316477704433 7260.487532571424 7869.499103482381 7079.12760950922 7499.686964037593 7181.967451712254 6968.166170040398 1.0998489764834576 1.1067479700512308 1.0718250277167678 1.1305850064660403 1.094020477077721 1.0419509746750673 1.1293500917525847 1.015924051861148 1.0762784326646035 1.0306825750785182 1.0 12.766563312995356 -14.999999999991905 0.13897244888866525 0.6887643029449696 1.1198490504454637 0.472762194602794 0.031072428438229428 33.47699725391681 0.3130517207647323 2.8591436835210695 0.06671240491703281 1.000000000018639e-15 14.999999999991905 0.4310847475004941 TEES(ph)PASDEAGEK ddPTM_A549_MK2206_60min_R1 2 TEESPASDEAGEK 13 0 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 TEES(1)PASDEAGEK;TEES(1)PASDEAGEK 266.89 1.0543999999999998e-82 30009000.0 7459.099999999999 7202.7 6068.7 5544.1 9972.0 7625.0 6135.1 8589.7 8023.7 6401.1 7103.9 True False 8718.013722513864 7569.286664780889 6929.332914357992 6902.404748884109 8505.132009828523 8431.87243893464 7249.7682559792975 9807.316279852994 6206.344761216002 4955.087064242977 5339.80557233413 1.6326462835430644 1.4175210243604826 1.2976751345141297 1.2926322232865375 1.5927793427337784 1.5790598224438552 1.3576839376963095 1.8366429539429896 1.1622791648766138 0.9279527123451079 1.0 12.382571497560695 -8.949699308466448 10.7065012667032 1.0714174567524228 1.4863513168105327 0.6305472183381868 0.16072066679066446 0.251416759350943 52.355146242916135 0.027308108980160672 0.028949365534464658 1.1227955727935732e-09 8.949699308466448 0.41493386005810984 TEES(ph)PASDEAGEK ddPTM_A549_PD325901_60min_R1 2 TEESPASDEAGEK 13 0 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 TEES(1)PASDEAGEK;TEES(1)PASDEAGEK 264.28 1.3953e-82 37380000.0 8162.4 7890.0 7547.700000000001 7427.6 8203.0 6899.9 7202.5 6575.0 7006.9 8096.900000000001 8410.0 True False 8991.04083915871 8554.917989957414 8059.9323100071815 7886.3859826964845 7626.8495788137225 6843.709502054553 7476.595078859234 6443.856467012284 6712.424360151114 7585.660352174398 7375.623315382459 1.2190211531555804 1.1598908491049753 1.0927798187846092 1.0692501020556173 1.0340616992881553 0.9278821883136905 1.0136899295366928 0.8736694095498478 0.9100823175380731 1.0284771913926096 1.0 12.848549261618782 -6.1798862329469735 0.7684613267345132 0.9510189570933235 1.2339917770119107 0.7804761957959468 0.04653598138143231 0.346324505507601 0.28398511679525434 0.00783667755191113 0.06421585349064732 6.608665448246032e-07 6.1798862329469735 0.28297281991858714 TEES(ph)PASDEAGEKEAK ddPTM_A549_MK2206_60min_R1 2 TEESPASDEAGEKEAK 16 1 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 T(0.004)EES(0.78)PAS(0.216)DEAGEKEAK;T(0.001)EES(0.79)PAS(0.209)DEAGEKEAK 104.63 2.6588e-07 50915000.0 5556.200000000001 7188.200000000001 5820.5 5447.6 8847.1 6254.4 6291.200000000001 6923.4 9346.6 8023.8 8569.9 True False 6493.950723952161 7554.0486767154 6645.934422202563 6782.262244552057 7545.703309682505 6916.236456665288 7434.229605388174 7904.81315202326 7229.610023453199 6211.218007228878 6441.757312792446 1.0081023560226439 1.1726689333226037 1.0316958710947786 1.0528590127236577 1.171373422388604 1.0736567866241393 1.1540685630340053 1.2271206082733646 1.1223040037686898 0.9642117368958082 1.0 12.653238594214539 -10.572159810518096 1.015060950318971 1.0041437078245916 1.1142789539346605 0.35934184836083327 0.06523543806223028 0.48305714703922153 0.9342614439820579 0.03487759494384692 0.011225452236606748 2.678182633015187e-11 10.572159810518096 0.11013524611006886 TEES(ph)PASDEAGEKEAK ddPTM_A549_PD325901_60min_R1 1 TEESPASDEAGEKEAK 16 1 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 TEES(0.995)PAS(0.005)DEAGEKEAK 184.78 1.2335999999999998e-34 30831000.0 6528.2 8136.8 7374.8 8430.9 7342.4 8754.5 8173.4 9440.6 8159.7 10360.0 8177.6 True False 7190.938058193162 8822.516692102086 7875.2982762750225 8951.657545036858 6826.695153904892 8683.206254545223 8484.44320965609 9252.299826992568 7816.776185121106 9705.86783195134 7171.807042077473 1.002667530791535 1.230166489469082 1.0980912104955027 1.2481732278234596 0.9518793678988035 1.2107417563802636 1.183027256572478 1.2900932460548233 1.0899311901811575 1.3533364429642853 1.0 12.808120957589122 -9.462139513966276 1.5333778182609046 1.0240696233192692 1.1512472831529577 0.0 0.14014218315089194 0.34650165214112566 1.6662023723074098 0.021757595319332374 0.017715614704758804 3.4503288220885245e-10 9.462139513966276 0.12717765983368845 TEESPAS(ph)DEAGEK ddPTM_A549_MK2206_60min_R1 2 TEESPASDEAGEK 13 0 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 TEES(0.009)PAS(0.991)DEAGEK;TEESPAS(1)DEAGEK 214.65 1.4235999999999998e-37 57246000.0 5460.7 6103.299999999999 4754.4 4673.5 7817.4 8122.200000000001 7844.0 9275.7 8173.4 6925.900000000001 7056.0 True False 6382.332658702987 6413.931900697961 5428.645411377009 5818.507709801386 6667.470815647158 8981.685812919986 9269.153265619412 10590.558880639883 6322.137950237773 5361.334379753549 5303.800464306879 1.20335082393358 1.2093086728774889 1.023538771473456 1.097044986695549 1.2571119257817873 1.693443385241256 1.7476436619360531 1.9967868233187573 1.1920014700371981 1.0108476772144537 1.0 12.372810785118267 -8.98484040384415 19.358767153406983 1.0847011737406327 1.4031734086352206 0.22112920854774465 0.286769715012707 10.14917204182239 12962.529573628639 0.057404616846367 0.058136724768620904 1.0355226344867564e-09 8.98484040384415 0.31847223489458787 TEESPAS(ph)DEAGEK ddPTM_A549_PD325901_60min_R1 2 TEESPASDEAGEK 13 0 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 TEESPAS(1)DEAGEK;TEESPAS(1)DEAGEK 218.6 5.675700000000001e-38 71838000.0 7059.200000000001 7397.5 7720.099999999999 6894.8 7952.299999999999 5684.3 7807.3 6589.599999999999 7213.4 6760.1 6996.8 True False 7775.844787291627 8020.913286528505 8244.032410732594 7320.676136773076 7393.757881945667 5638.008945423659 8104.411073818491 6458.165258558802 6910.2458832742095 6333.266132314119 6136.237956369558 1.2672006598473122 1.307138566587466 1.343499464875722 1.1930235086750578 1.204933370334958 0.9188054611818426 1.3207458920992339 1.052463301533976 1.1261372085646082 1.0321089529684946 1.0 12.58313871467012 -2.0000000000052514 0.12231384199561347 0.9502909777841604 2.1757674479880507 0.46936400887679375 0.1003136928281518 49.04258857142226 0.3957662886646053 0.3209232616095724 10.335459761684824 0.009999999999879083 2.0000000000052514 1.2254764702038903 TEESPAS(ph)DEAGEKEAK ddPTM_A549_MK2206_60min_R1 2 TEESPASDEAGEKEAK 16 1 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 TEES(0.007)PAS(0.993)DEAGEKEAK;TEES(0.013)PAS(0.987)DEAGEKEAK 159.26 6.5724999999999996e-21 160267000.0 28547.0 32260.0 29357.0 27995.0 43370.0 34273.0 30631.0 34341.0 46205.0 42000.0 39323.0 True False 33365.03569285883 33901.896206399186 33520.26403790063 34853.77625674332 36990.33045189162 37899.74611142386 36196.256205913814 39208.94191490174 35739.641274223264 32512.170829733157 29558.013840410906 1.1287982972402248 1.1469612400021765 1.1340499472962777 1.179165029319128 1.251448444797717 1.2822155885050832 1.2245835055543308 1.326508003095132 1.2091354130621932 1.0999443672119609 1.0 14.851261709965215 -10.483556222173446 0.9024517915758249 1.0051768822201994 1.2097263162150622 0.4480501861648484 0.0651103087793456 0.3087138914778387 0.4675918126161943 0.03863897185401838 0.012330160377836349 3.284307241118877e-11 10.483556222173446 0.2045494339948628 TEESPASDEAGEKEAKS(ph)D ddPTM_A549_MK2206_60min_R1 2 TEESPASDEAGEKEAKSD 18 2 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 TEESPASDEAGEKEAKS(1)D;TEESPASDEAGEKEAKS(1)D 213.05 5.3536e-56 280060000.0 12166.0 14984.7 13599.8 11034.2 17870.1 14357.900000000001 14693.7 13976.0 19374.0 17868.8 16748.4 True False 14219.323369857442 15747.35722517142 15528.45613865998 13737.579495344064 15241.431962378323 15877.243447997325 17363.35509166647 15957.14079970493 14985.819933920598 13832.225669579424 12589.310047675357 1.129475985261247 1.2508514895206035 1.2334636354060835 1.0912098791212739 1.210664595967488 1.2611686730941298 1.3792141925103079 1.2675151171331625 1.1903607010368105 1.0987278585718503 1.0 13.619911598422684 -10.176047241018217 0.8285066068711014 1.0109064188254933 1.2269362529910237 0.4233988092785269 0.0761759445623268 0.3305852661637587 0.44495991243951427 0.038170645327799804 0.015337759127195332 6.667342402756711e-11 10.176047241018217 0.21602983416553045 TEESPASDEAGEKEAKS(ph)D ddPTM_A549_PD325901_60min_R1 2 TEESPASDEAGEKEAKSD 18 2 P05114;A6NL93;A6NEL0 P05114 HMGN1 Non-histone chromosomal protein HMG-14 1 TEESPASDEAGEKEAKS(1)D;TEESPASDEAGEKEAKS(1)D 195.7 5.7631e-49 344210000.0 82201.0 83408.0 63847.0 60804.0 64245.0 51795.0 52821.0 55133.0 54450.0 84927.0 89034.0 True False 90545.98500682226 90437.08488040145 68180.04136320038 64559.72498409673 59732.65283321797 51373.19869257754 54831.132059760275 54033.32906399823 52161.65585497557 79564.69472626745 78083.38243302752 1.1596063360150153 1.1582116714522421 0.8731696711740006 0.8268049227948072 0.7649854677395789 0.6579274243996868 0.7022125624077464 0.691995241245381 0.6680250551353211 1.0189709032457765 1.0 16.252727928782996 -5.8221531651592615 3.1613630765884158 0.80037448428061 1.1709523970751043 0.589808520668531 0.11655875479602347 0.15269441293991706 3.024320797782615 0.01969552120856434 0.07889906950694882 1.506075816000636e-06 5.8221531651592615 0.37057791279449437 TEFLDLDNSPLSPPS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TEFLDLDNSPLSPPSPR 17 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 TEFLDLDNSPLSPPS(1)PR 192.62 5.267699999999999e-40 13427000.0 9839.2 12811.0 11506.0 9322.1 17485.0 14643.0 14161.0 14639.0 19995.0 15795.0 17742.0 True False 11499.816414655708 13463.025179794808 13137.723814425342 11606.014918484976 14912.97966223945 16192.512540763262 16733.870397046972 16714.123080057278 15466.164425453837 12226.898529896074 13336.171745710406 0.8623026633077545 1.0095119826366366 0.9851195729127518 0.870265855883122 1.118235423672931 1.2141799647992386 1.254773162502908 1.2532924289486145 1.1597154506073712 0.9168222157778426 1.0 13.703056968402226 -6.776351480027823 24.566353686865032 1.1176647646928002 0.9411594250533464 0.45244723438614276 0.10458095659004356 155.83225909676779 256719.70348481805 0.015865814235493075 0.030075251466721756 1.67358787191603e-07 6.776351480027823 -0.1765053396394538 TEFLHSQNSLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TEFLHSQNSLSPR 13 0 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 TEFLHSQNS(0.187)LS(0.813)PR;TEFLHSQNS(0.038)LS(0.961)PR 102.64 4.0226e-05 21825000.0 6312.9 5656.9 5060.6 4825.1 7941.9 7722.6 7380.0 6926.7 9916.1 8926.9 9082.0 True False 7378.363184413365 5944.812047426524 5778.269175671904 6007.249716606973 6773.657030571311 8539.800406153 8720.850471732685 7908.580937129085 7670.119182757821 6910.307089998688 6826.688749551457 1.0808114233856283 0.8708192603357118 0.846423410771666 0.8799653736962413 0.9922317069188734 1.2509432785717822 1.277464198482124 1.1584797882646567 1.1235489802082719 1.012248740716753 1.0 12.73697026098508 -7.009708915775421 13.94373778369855 1.0992745949773026 0.91395641551542 0.4915335201295954 0.10076790811540393 1.2217435595845851 1756.0305522113936 0.016719532452657143 0.030248497894382387 9.778924300372297e-08 7.009708915775421 -0.18531817946188267 TEFLHSQNSLS(ph)PR ddPTM_A549_PD325901_60min_R1 1 TEFLHSQNSLSPR 13 0 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 TEFLHSQNS(0.003)LS(0.997)PR 144.29 6.354e-13 13011000.0 5385.6 5672.1 6157.2 6537.0 8512.9 6973.7 6891.2 7026.6 8649.6 8988.4 8685.1 True False 5932.3421473308235 6150.107773236681 6575.064618251413 6940.7756433958375 7914.983271910677 6916.908499322867 7153.4483870093345 6886.44895073894 8286.087391794243 8420.870890030055 7616.887759385041 0.7788406938281809 0.8074305369222373 0.8632219386651772 0.9112351215683674 1.039136130391096 0.9081016706331658 0.9391563343171644 0.9041027212530339 1.0878573576963448 1.105552708145712 1.0 12.894985921320263 -5.098227607105479 0.34042848496252665 1.037717212097913 0.522370836273828 0.6728315538832144 0.05855319000956215 3.2176400348957395 0.234861568155005 0.019584552684598997 0.6960442273728279 7.975765800106299e-06 5.098227607105479 -0.515346375824085 TEGDEEAEEEQEENLEAS(ph)GDYK ddPTM_A549_MK2206_60min_R1 2 TEGDEEAEEEQEENLEASGDYK 22 0 P12956;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 TEGDEEAEEEQEENLEAS(1)GDYK;TEGDEEAEEEQEENLEAS(0.999)GDY(0.001)K 121.62 9.4783e-16 9195900.0 1138.07 970.0799999999999 933.95 867.47 1416.13 1102.3400000000001 815.2 1045.34 1570.42 1217.07 1379.09 True False 1330.14839285991 1019.4529284533085 1066.3981537008992 1080.0001889422083 1207.8191529360674 1218.98888712593 963.3112878802835 1193.520146219487 1214.722377445421 942.1330417081749 1036.6238920522915 1.2831542887039806 0.9834356860471466 1.0287223378477812 1.0418438135783665 1.1651469372800642 1.1759220450848333 0.9292775280079019 1.1513531140562223 1.1718062710676416 0.9088475086590517 1.0 10.017676835039046 -5.243227376730018 23.909645034039173 1.0783106742526478 1.283154608848543 0.2933047053426713 0.09582012135799323 2037.2273113198778 2674500.8590536616 0.012128669401834087 0.5080188930266296 5.711795149020487e-06 5.243227376730018 0.20484393459589523 TEGDEEAEEEQEENLEAS(ph)GDYK ddPTM_A549_PD325901_60min_R1 2 TEGDEEAEEEQEENLEASGDYK 22 0 P12956;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 TEGDEEAEEEQEENLEAS(1)GDYK;TEGDEEAEEEQEENLEAS(1)GDYK 155.87 4.5845e-33 12119400.0 1718.8000000000002 1642.4 1449.52 1501.92 2214.16 1602.58 1628.1 1498.6100000000001 2140.89 1889.42 1865.58 True False 1893.2913106863161 1780.8108120033003 1547.8931438718564 1594.6901872921935 2058.6450400373265 1589.5291198137063 1690.0582364305044 1468.7190479131987 2050.915838445522 1770.1216987495666 1636.125486885993 1.1571797676043676 1.0884316797684535 0.946072386426748 0.9746747422945763 1.2582439773342244 0.9715202975286616 1.032963699897592 0.8976811740208167 1.2535198888374945 1.0818984930786733 1.0 10.676067688421762 -8.766035873671676 24.99981878395038 1.119717707129018 1.0417403378189896 0.07379185758736506 0.11096966861344057 246.20316403832993 1339066.7499509295 0.022050569570143744 0.02385550265423707 1.7138157367427088e-09 8.766035873671676 -0.07797736931002852 TEGDEEAEEEQEENLEAS(ph)GDYKYSGR ddPTM_A549_MK2206_60min_R1 2 TEGDEEAEEEQEENLEASGDYKYSGR 26 1 P12956;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 TEGDEEAEEEQEENLEAS(1)GDYKYSGR;TEGDEEAEEEQEENLEAS(1)GDYKYSGR 170.36 1.6904999999999998e-48 16438500.0 2884.1 3108.3 3122.0 2645.3 4372.6 2594.0 2397.0 2318.5 5654.7 5132.5 5383.0 True False 3370.865570524892 3266.4991933772662 3564.746545162169 3293.398618752028 3729.396332348194 2868.4953582421576 2832.503872729438 2647.154475108461 4373.919478700361 3973.0646853239396 4046.252536757924 0.8330833382005888 0.807289995793135 0.8809995206128276 0.8139379805964551 0.9216914412703433 0.7089264281414701 0.7000314110396563 0.6542237418600432 1.080980348845201 0.9819121889281219 1.0 11.982370649580176 -8.775839067942696 24.999896500951376 1.0382407413508925 0.7931142732066043 0.6292364253779704 0.07862027248874263 103.91628509328002 180412.75059213303 0.014484333272100079 0.015453973553758585 1.6755636574613183e-09 8.775839067942696 -0.24512646814428818 TEGDEEAEEEQEENLEAS(ph)GDYKYSGR ddPTM_A549_PD325901_60min_R1 2 TEGDEEAEEEQEENLEASGDYKYSGR 26 1 P12956;P12956-2 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 TEGDEEAEEEQEENLEAS(1)GDYKYSGR;TEGDEEAEEEQEENLEAS(0.995)GDYKYS(0.005)GR 199.64 1.0508e-68 30573000.0 1821.63 1522.5 1652.26 2720.8999999999996 2033.2800000000002 2572.9 1834.9299999999998 2888.8 2756.2 2723.4 2306.91 True False 2006.5605365868723 1650.806418214214 1764.392299446515 2888.963813387752 1890.4694272352008 2551.9471554422767 1904.7592652622245 2831.1806177802423 2640.3664989436847 2551.4440592216497 2023.1746947073639 0.9917880753629658 0.8159485300665004 0.8720909292025918 1.4279359172222237 0.9344074103836308 1.2613577869069756 0.941470487074144 1.3993752616551731 1.3050610537245735 1.2611091201843525 1.0 10.982405182070208 -6.203258607976151 24.988795197292543 1.1593099476187494 0.885542706248266 0.3731478503556219 0.16829054064416324 238.7680270065619 102550.94711332205 0.023805558447247424 0.0629836087377962 6.262408479457032e-07 6.203258607976151 -0.27376724137048336 TEGSS(ph)PPDSK ddPTM_A549_MK2206_60min_R1 2 TEGSSPPDSK 10 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 TEGS(0.243)S(0.757)PPDSK;TEGS(0.04)S(0.959)PPDSK 112.93 3.4671e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TEGT(ph)PNQGK ddPTM_A549_MK2206_60min_R1 2 TEGTPNQGK 9 0 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 TEGT(1)PNQGK;T(0.004)EGT(0.996)PNQGK 77.37899999999999 0.002032 10147700.0 4445.8 3856.1000000000004 2786.5 1880.04 2449.96 2398.87 1624.12 2058.46 1987.8400000000001 5753.799999999999 5559.7 True False 5196.142350625694 4052.3590192652186 3181.6676002864792 2340.6498843982035 2089.5741294423874 2652.7168311589685 1919.2015810502016 2350.253008769362 1537.5974139281889 4454.012583812351 4179.073050086019 1.2433719842534794 0.9696789146056702 0.7613333297011858 0.5600882914334376 0.5000089982632338 0.63476201525225 0.45924097474455444 0.5623861991885942 0.36792786235132696 1.0657895974612535 1.0 12.02896726181385 -5.560299425726009 1.8086107391959871 0.6419325198578043 1.2775555617829817 0.4534879130285283 0.20308772359178112 0.40473000984557955 2.0004131905950997 0.03396184846611563 0.3570021052606111 2.752330445963871e-06 5.560299425726009 0.6356230419251774 TEGT(ph)PNQGK ddPTM_A549_PD325901_60min_R1 2 TEGTPNQGK 9 0 Q9P2E9;A0A087WVV2;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 T(0.004)EGT(0.996)PNQGK;T(0.441)EGT(0.559)PNQGK 91.54899999999999 0.0010917 21393000.0 6207.4 5127.1 5448.799999999999 4616.2 5883.5 4783.6 3581.7 5096.200000000001 4762.799999999999 6130.6 6958.7 True False 6837.570678353641 5559.178710559016 5818.588334296156 4901.332189849145 5470.26325697312 4744.643947597528 3718.003553481443 4994.552293108442 4562.6360790831495 5743.512869745261 6102.82401483376 1.1203945356664353 0.9109190592824995 0.9534255485908278 0.8031252708476891 0.8963495004405971 0.7774505599481507 0.6092267357610706 0.8184001834181177 0.7476270113627773 0.9411237905246582 1.0 12.575261273141999 -4.58192253377628 0.9647308153766343 0.8453323595707851 1.8010842024422378 0.3996361042358718 0.10254227055653638 6.18782179216783 1.7297456346917486 0.018774871611143756 8.46474237741156 2.6186500619095403e-05 4.58192253377628 0.9557518428714527 TEGT(ph)PPPPGQPAK ddPTM_A549_MK2206_60min_R1 2 TEGTPPPPGQPAK 13 0 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;Q9Y4D8-2;A0A494C150 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 TEGT(1)PPPPGQPAK;TEGT(1)PPPPGQPAK 159.77 1.6634e-18 58606000.0 4474.5 5683.4 5113.2 4394.1 6761.4 4662.1 4619.1 5442.6 7240.9 5919.5 7554.7 True False 5229.686208978066 5972.660784235873 5838.328646612172 5470.654697258642 5766.807016772423 5155.440327548486 5458.330679401149 6214.105217263454 5600.847711341267 4582.280838728704 5678.659490887066 0.9209367487820853 1.0517730097782074 1.028117402704166 0.9633707930608935 1.0155225940253705 0.9078622051246028 0.9612005594208468 1.0942908669265439 0.9862975091796456 0.8069300239047973 1.0 12.471334690783598 TEGT(ph)PPPPGQPAK ddPTM_A549_PD325901_60min_R1 2 TEGTPPPPGQPAK 13 0 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;Q9Y4D8-2;A0A494C150 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 TEGT(1)PPPPGQPAK;TEGT(1)PPPPGQPAK 174.46 7.5488e-22 85962000.0 8080.6 7877.0 7598.3 8935.4 9766.2 8750.0 8964.0 9145.9 8834.3 9503.3 9702.8 True False 8900.936563376685 8540.822434333902 8113.966330289703 9487.319364234232 9080.255803560958 8678.742901053258 9305.129925289017 8963.47784968025 8463.0250931058 8903.260016156677 8509.417111116867 1.0460101376095818 1.0036906550480416 0.9535278649920053 1.114920004548821 1.06708317208923 1.0198986355616744 1.0935096733162386 1.0533597933482646 0.9945481556015794 1.046283182490289 1.0 13.054844596396826 -8.766657523172334 24.90582096218184 0.9974255143803404 1.0436209947769066 0.05549496315119151 0.04358835277553293 143.46829064620246 684761.5988138315 0.007164938186521446 0.007740825452319627 1.7113643342888537e-09 8.766657523172334 0.04619548039656618 TEGTDS(ph)PLSR ddPTM_A549_PD325901_60min_R1 1 TEGTDSPLSR 10 0 Q155Q3-2;Q155Q3 Q155Q3-2 DIXDC1 Dixin 1 T(0.007)EGT(0.156)DS(0.831)PLS(0.006)R 69.721 0.0034661 2551900.0 923.94 1191.7 1167.5 1115.6 1150.9 1150.2 1107.6 1075.5 1129.3 1319.9 1141.6 True False 1017.737708631322 1292.1287412715142 1246.7335707478287 1184.5080782885723 1070.064754389456 1140.8331525475942 1149.7503241019763 1054.0483087865725 1081.8394482465358 1236.5612887444563 1001.1904371986459 1.0165275963671565 1.2905923721034736 1.245251177424565 1.1830996724288072 1.0687924241301408 1.1394766771241562 1.1483832459676746 1.0527950224293234 1.080553117620208 1.2350909904856697 1.0 9.967500701064676 -8.411743736585485 0.34646342839062866 1.0005133310644296 1.2007084221523594 0.0 0.09836418144061544 0.8130194124792584 0.27114726787025706 0.04413689222014027 0.05497221697745084 3.874862208199091e-09 8.411743736585485 0.20019509108792977 TEIEEDS(ph)FR ddPTM_A549_MK2206_60min_R1 1 TEIEEDSFR 9 0 Q9Y6Q6-6;Q9Y6Q6;Q9Y6Q6-5 Q9Y6Q6-6 TNFRSF11A Tumor necrosis factor receptor superfamily member 11A 1 TEIEEDS(1)FR 51.276 0.026382 1504600.0 496.57 595.26 223.88 353.58 717.95 550.03 682.02 601.63 817.4 808.68 989.09 True False 580.3788760291066 625.5561914389705 255.62955045833016 440.20711587280914 612.3405060626142 608.2338095196352 805.9342057901259 686.9128949146017 632.2602051195782 625.9986263473477 743.471655504718 0.7806334938688507 0.8413988439334669 0.34383227466122 0.592096702831216 0.8236232027526547 0.8180995267489056 1.084014702945204 0.9239261373700649 0.8504160184699415 0.8419939371089785 1.0 9.53813393105407 -7.069658986147339 2.2598991781874362 0.934923164141722 0.6364500935124622 0.4710108029476304 0.13759811518955717 0.20159823246647812 2.0311440697607743 0.021174135411130404 0.041268155325852665 8.518066256644027e-08 7.069658986147339 -0.2984730706292599 TEIIILATR ddPTM_A549_PD325901_60min_R1 1 TEIIILATR 9 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;H0YF32;H0YEU2;E9PQ96;E9PJH4;E9PK82 P23396 RPS3 40S ribosomal protein S3 0 57.598 0.036420999999999995 3636300.0 1459.9 2109.6 1974.3 1514.2 2433.8 2662.7 1821.4 2079.6 2082.4 1827.7 2269.9 False True 1608.1079732784224 2287.3833956418425 2108.2878704303544 1607.7286950022913 2262.8582841541916 2641.015854015372 1890.7143737083245 2038.120746585359 1994.8839697410683 1712.2987100827656 1990.7166900816442 0.8078035319091387 1.149025075762052 1.0590597250399745 0.8076130084268065 1.136705336037237 1.326665852139441 0.9497656713928397 1.0238125579294615 1.0020933564681438 0.8601418366631266 1.0 10.959072202407008 -5.237830402485284 23.276355527718458 1.0265506877403372 0.8078028882306062 0.18366250027524644 0.13520762935516728 3128.971551814131 3084765.9938022178 0.016650563938690785 1.1867263840875488 5.783218453449778e-06 5.237830402485284 -0.218747799509731 TEIKEEEDQPSTSATQS(ph)SPAPGQSK ddPTM_A549_MK2206_60min_R1 1 TEIKEEEDQPSTSATQSSPAPGQSK 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 TEIKEEEDQPSTS(0.002)AT(0.005)QS(0.838)S(0.155)PAPGQSK 200.79 1.4101e-68 49826000.0 3993.8 4849.6 5028.7 3922.2 5604.8 3849.5 3772.0 5106.5 5772.6 6525.4 6875.4 True False 4667.855800964708 5096.423925683619 5741.845275995199 4883.139176074245 4780.341344633665 4256.851534908707 4457.32357444115 5830.362013000372 4465.115316947974 5051.307607912879 5168.048428613305 0.9032144078063894 0.9861408994286641 1.1110277613121855 0.9448710172757597 0.9249799824179145 0.8236864637994326 0.8624771296187608 1.1281554523986492 0.8639848056040871 0.9774110435857989 1.0 12.335403873926296 -6.492730829861027 24.741130651288096 0.934329500608366 1.0035990769288377 0.07803945176869742 0.08949370715594682 1123.6055186559813 922095.2164088833 0.01298091118393222 0.030124125410643254 3.2156529415140223e-07 6.492730829861027 0.0692695763204717 TEIKEEEDQPSTSATQS(ph)SPAPGQSK ddPTM_A549_PD325901_60min_R1 1 TEIKEEEDQPSTSATQSSPAPGQSK 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 TEIKEEEDQPSTSATQS(0.902)S(0.098)PAPGQSK 286.93 3.1046999999999995e-154 76235000.0 6707.0 7126.9 7117.3 6672.1 6733.6 5929.9 6754.2 6727.7 7051.9 7491.4 7225.2 True False 7387.8897025675615 7727.508874857726 7600.3227778017335 7084.220463561473 6260.655165658912 5881.608860452076 7011.234777040058 6593.510745721447 6755.533166642829 7018.391725509673 6336.546204316448 1.16591743583199 1.2195143262103505 1.1994424932346273 1.1179939726054091 0.9880232801575977 0.9282042094864756 1.1064757599753654 1.0405527764052214 1.0661222926206972 1.1076052314948406 1.0 12.629480984393842 -6.516326910213448 3.559179838873479 1.0281525879450006 1.195436599869707 0.6608079185031019 0.05069477450129473 0.09561555241211728 2.5815001632197 0.006865744494796232 0.015996455586380725 3.045601584744063e-07 6.516326910213448 0.16728401192470632 TEIKEEEDQPSTSATQSS(ph)PAPGQSK ddPTM_A549_MK2206_60min_R1 1 TEIKEEEDQPSTSATQSSPAPGQSK 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 TEIKEEEDQPST(0.001)S(0.001)AT(0.006)QS(0.148)S(0.845)PAPGQSK 142.9 1.5593e-32 40153000.0 4672.4 4882.8 5608.6 4987.6 6643.1 5183.5 4581.9 4418.6 6728.8 7246.5 6964.7 True False 5460.986890787594 5131.3136638749575 6403.983815886144 6209.562223901873 5665.908790061361 5732.01452947117 5414.371920925746 5044.950081394978 5204.737543685606 5609.510617087174 5235.17277405869 1.0431340332926273 0.9801612831770568 1.2232612164433507 1.1861236470879193 1.0822773258099623 1.0949045574721867 1.0342298439041062 0.9636644861834737 0.9941863942821723 1.0715043913896025 1.0 12.354021435221133 -7.85698859800848 2.7480756080625586 0.994625378592937 1.106014470497676 0.3099855421528067 0.06575463625878859 0.20878977035577734 3.2102281205710574 0.010196740448811947 0.014676758726443135 1.3899891235861928e-08 7.85698859800848 0.111389091904739 TEIKEEEDQPSTSATQSS(ph)PAPGQSK ddPTM_A549_PD325901_60min_R1 1 TEIKEEEDQPSTSATQSSPAPGQSK 25 1 A0A669KB12;Q09472 A0A669KB12 EP300 Histone acetyltransferase p300 1 TEIKEEEDQPSTSAT(0.002)QS(0.163)S(0.835)PAPGQSK 267.78 3.637799999999999e-138 80297000.0 4587.1 6222.9 5566.9 5638.9 7353.9 5650.7 5790.1 5762.1 6333.8 6506.7 7103.3 True False 5052.779015155461 6747.325622269452 5944.70331048915 5987.202046128922 6837.387433577741 5604.682572683614 6010.445423964296 5647.170395219994 6067.612412382816 6095.865851559628 6229.639131528682 0.8110869519845794 1.0831005584449858 0.95426126377089 0.9610832858403038 1.0975575453437099 0.8996801346514416 0.964814381228757 0.9065004049173943 0.9739909943858808 0.9785263195596648 1.0 12.604932878371567 -9.942944457306528 1.2632048782016723 0.9955713895008995 0.9662080086787453 0.01475176727689198 0.07600437388886576 1.3302221184795695 4.2682109934211105 0.02085066957649608 0.012800542619992045 1.1403956254594158e-10 9.942944457306528 -0.029363380822154173 TEIMS(ph)PLYQDEAPK ddPTM_A549_MK2206_60min_R1 8 TEIMSPLYQDEAPK 14 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 TEIMS(0.999)PLY(0.001)QDEAPK;TEIMS(0.999)PLYQDEAPK;TEIMS(1)PLYQDEAPK;T(0.008)EIMS(0.853)PLY(0.139)QDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK 311.0 5.587299999999998e-136 163569100.0 36271.4 37755.3 36901.2 32501.999999999996 52012.600000000006 37458.4 37328.0 38931.7 55298.899999999994 55731.9 56805.2 True False 42393.125569410426 39676.88350407516 42134.34503918587 40464.991459070196 44361.61544067459 41422.22302512645 44110.014418541694 44450.38769833085 42773.787444197485 43142.025082514425 42698.90109623652 0.9928387963395844 0.9292249328536532 0.9867782064044639 0.9476822686342338 1.0389404481555762 0.9701004466547595 1.0330480009104859 1.0410194772494674 1.001753823776218 1.0103778779992294 1.0 15.38191132050972 -6.746799501731436 24.9999666393586 1.0062511915812649 0.9632554081352029 0.4479626027259266 0.02559793901278616 180.03285627621472 307433.30769809306 0.003383615418988559 0.007018659028770599 1.7914327037259198e-07 6.746799501731436 -0.04299578344606192 TEIMS(ph)PLYQDEAPK ddPTM_A549_PD325901_60min_R1 6 TEIMSPLYQDEAPK 14 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 TEIMS(1)PLYQDEAPK;T(0.011)EIMS(0.989)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;T(0.001)EIMS(0.999)PLYQDEAPK 217.48 3.7857e-39 206621000.0 44180.2 43882.5 43835.5 43141.9 51931.6 50073.3 46889.9 47241.799999999996 48931.100000000006 47215.50000000001 54100.00000000001 True False 48665.34138025577 47580.63228064715 46810.44063427533 45806.67718063618 48284.10357029407 49665.51964654968 48674.32080363784 46299.52523852487 46874.69602948386 44234.30527215237 47446.0429681559 1.0256986322951782 1.0028366815032725 0.9866036808526442 0.9654477868972128 1.0176634456681803 1.0467789627869157 1.0258878877698254 0.9758353350899982 0.9879579643964089 0.9323075751931698 1.0 15.534000150077816 -5.292383776652082 3.9083198438123383 0.9977559443170319 1.0275565708172636 0.0763658994594516 0.02958572806807785 0.3924475427440386 11.679076465266942 0.003172908873363105 0.031259018274022936 5.100540769995836e-06 5.292383776652082 0.02980062650023174 TEKEPDATPPS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TEKEPDATPPSPR 13 1 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 T(0.003)EKEPDAT(0.045)PPS(0.952)PR 49.395 0.01983 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TEKPERPS(ph)RER ddPTM_A549_PD325901_60min_R1 1 TEKPERPSRER 11 3 H7BYN4;Q02241;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 TEKPERPS(1)RER 54.233999999999995 0.0056898999999999995 60261000.0 1853.5 1458.0 1797.2 1611.2 2014.5 1517.3 1468.0 1749.1 1724.9 1961.5 1774.4 True False 2041.6659555254164 1580.8707768514444 1919.16879944154 1710.720164699307 1873.0084696477195 1504.9436118592116 1523.8655433204237 1714.2128283575944 1652.408451501328 1837.6505552483168 1556.1600488483507 1.3119896999260252 1.0158792972621171 1.2332721180329986 1.099321477868128 1.203609147422757 0.9670879373705538 0.9792473110000306 1.1015658894637554 1.0618499380730193 1.1808878891398642 1.0 10.603774731750622 -7.2561228155042015 24.964198996082793 1.0278711559883251 1.1633715638906674 0.3004409368978188 0.0910964336715305 311.46836370101215 1462516.0631760962 0.010639121154089035 0.01809368777472769 5.5446889078110044e-08 7.2561228155042015 0.1355004079023423 TEKS(ph)PSLR ddPTM_A549_MK2206_60min_R1 2 TEKSPSLR 8 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 T(0.05)EKS(0.894)PS(0.056)LR;T(0.047)EKS(0.914)PS(0.039)LR 48.44 0.009889 14910200.0 3697.6 3870.7 3288.6 3666.8999999999996 4567.299999999999 4296.2 3939.1 3705.9 4927.9 5227.6 5648.200000000001 True False 4321.664482359433 4067.702096903579 3754.972930307596 4565.290664613394 3895.4562202657225 4750.821032413244 4654.783481463718 4231.222673842764 3811.7385182392545 4046.6815292741226 4245.596057610277 1.0179170188866185 0.9580991789391218 0.8844395178803612 1.0753002882669587 0.9175286973623115 1.1189997748130904 1.0963792641365322 0.996614519240061 0.8978099815705904 0.9531480325407788 1.0 12.05175139886231 -8.545782507821396 24.434954525602382 0.9515050967758522 1.0090483071328658 0.11747009633858085 0.07130002143151283 311.09292195642 331888.82317681145 0.012923212580521086 0.01465404493381987 2.845885953957715e-09 8.545782507821396 0.0575432103570136 TEKS(ph)PSLR ddPTM_A549_PD325901_60min_R1 4 TEKSPSLR 8 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 T(0.023)EKS(0.958)PS(0.02)LR;T(0.226)EKS(0.753)PS(0.021)LR;T(0.032)EKS(0.942)PS(0.026)LR;T(0.023)EKS(0.97)PS(0.007)LR 56.043 0.0054665 13780500.0 4771.1 4134.299999999999 4681.7 4318.9 5844.0 4718.8 4741.2 5182.6 5625.9 5420.1 6035.700000000001 True False 5255.458559701816 4482.711970327112 4999.42831534913 4585.668644066431 5433.5376007055165 4680.371657313156 4921.62896048419 5079.228977328953 5389.462987594251 5077.873960999947 5293.347163454686 0.9928422220226829 0.846857731394569 0.94447391432499 0.8663079338014945 1.0264842703344128 0.884198884521779 0.9297763416053946 0.95954956674597 1.0181578538440006 0.9592935819622095 1.0 12.369964560696083 -8.544937995918707 2.974243022303454 1.008576322540551 0.9249238410738426 0.21865580435065046 0.051525481307751135 0.18690047960622078 3.3815002770726608 0.007720050407745379 0.008988901072451067 2.8514253355082987e-09 8.544937995918707 -0.08365248146670845 TEKS(ph)PSLRK ddPTM_A549_PD325901_60min_R1 2 TEKSPSLRK 9 2 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 T(0.074)EKS(0.925)PS(0.001)LRK;T(0.239)EKS(0.758)PS(0.003)LRK 81.92 0.00031933 43445000.0 8103.0 8265.9 8509.900000000001 8076.1 9991.6 9512.599999999999 9317.2 11104.7 9092.1 9161.9 9885.7 True False 8925.610594886675 8962.496402178569 9087.43298818582 8574.942354846124 9289.824485148749 9435.132539492479 9671.771144567472 10883.208047031376 8709.990655629443 8583.416070420366 8669.8215706155 1.0295033781477252 1.0337578840786097 1.0481683981808487 0.9890563819570463 1.0715127652262897 1.0882729780127005 1.1155674964924152 1.2552978118855034 1.0046332078101914 0.990033762576154 1.0 13.08178658700919 -8.942218773091307 24.999999972991187 1.0020414897507968 1.0781148881687854 0.2343529971158873 0.06484278122235222 91.44258278951276 39564.0065466199 0.011739156577005307 0.012496972715795423 1.1423027620585791e-09 8.942218773091307 0.07607339841798866 TELESTIFGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TELESTIFGSPR 12 0 Q9UQK1 Q9UQK1 PPP1R3C Protein phosphatase 1 regulatory subunit 3C 1 TELEST(0.001)IFGS(0.999)PR 95.01799999999999 0.00026023 3813600.0 868.33 898.14 1160.2 884.43 1522.5 1193.4 1320.2 1183.2 1388.3 1713.0 1500.6 True False 1014.8828753697453 943.8514897338927 1324.7338057966533 1101.1153897035708 1298.542266843554 1319.6847958851936 1560.063251054403 1350.9222233980308 1073.852266659543 1326.032110269832 1127.9596055468955 0.8997510818463001 0.8367777401711675 1.174451460213729 0.976201084053618 1.1512311792530467 1.1699752273002182 1.3830843262317007 1.1976689739195323 0.9520307831758581 1.175602480575446 1.0 10.139499687575508 -3.8180866870933863 12.736700545360089 1.0351965780224874 0.4006880423701422 0.0 0.1616701332811386 0.0 0.0 0.022049642782516598 0.0 0.00015202440520302392 3.8180866870933863 -0.6345085356523452 TELESTIFGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TELESTIFGSPR 12 0 Q9UQK1 Q9UQK1 PPP1R3C Protein phosphatase 1 regulatory subunit 3C 1 TELESTIFGS(1)PR;TELESTIFGS(1)PR 188.91 1.7678e-19 15004600.0 2616.7 2655.1000000000004 2804.0 2911.9 3240.3 3096.5 2930.9 3507.6000000000004 3135.1 2811.0 3322.6000000000004 True False 2882.3454576872728 2878.8545950742623 2994.296301821765 3091.7614495952794 3012.712506428146 3071.2831306413013 3042.4370033500213 3437.63816634103 3003.342649603929 2633.512980271738 2913.941263696758 0.9891570202861942 0.987959033677301 1.0275760665206632 1.0610239431089048 1.0338960994038988 1.053996238326689 1.0440968873512046 1.1797211595061068 1.030680572398962 0.9037632340367574 1.0 11.508756081959008 -5.803718725952492 4.635135132598869 1.0356392364852365 0.9879647725176371 0.08778520378936483 0.060690945712159536 0.3169930462216882 14.866582930325837 0.007035600317974923 0.02469230906652977 1.5713801908931696e-06 5.803718725952492 -0.047674463967599334 TELGSQT(ph)PESSR ddPTM_A549_MK2206_60min_R1 2 TELGSQTPESSR 12 0 H0YID1;F8VUX5;H0YIQ8;F8VXI8;F8VX10;Q9H9L4-4;Q9H9L4 H0YID1 KANSL2 KAT8 regulatory NSL complex subunit 2 1 TELGS(0.003)QT(0.997)PESSR;TELGS(0.002)QT(0.996)PES(0.002)SR 138.42 1.6233999999999998e-08 22474000.0 1537.2 2019.8200000000002 1829.96 1505.13 2728.35 1781.58 2078.6800000000003 1852.1599999999999 2440.08 2605.1400000000003 2665.8 True False 1796.6417790682942 2122.6202106512483 2089.4758449022943 1873.8869175678522 2327.013329223391 1970.1056130829088 2456.3492491302586 2114.7093520021085 1887.4057760070718 2016.6370646516916 2003.8082876628785 0.896613608262789 1.0592930589816778 1.0427523719543716 0.935162774355745 1.1612953911561466 0.98318068909712 1.2258404480376697 1.0553451470492612 0.9419093571114173 1.006402197788979 1.0 10.968528771404543 -8.749692247107605 24.752350397336674 0.9725683080561321 1.0495325170024745 0.0833315966073277 0.08916524691026963 282.1294716297568 594473.8092224902 0.014391862638812283 0.016252034586813128 1.7795399938270723e-09 8.749692247107605 0.07696420894634237 TELGSQT(ph)PESSR ddPTM_A549_PD325901_60min_R1 2 TELGSQTPESSR 12 0 H0YID1;F8VUX5;H0YIQ8;F8VXI8;F8VX10;Q9H9L4-4;Q9H9L4 H0YID1 KANSL2 KAT8 regulatory NSL complex subunit 2 1 TELGS(0.002)QT(0.997)PES(0.001)SR;TELGSQT(1)PESSR 150.49 3.3696e-12 25662000.0 3242.7 3141.1000000000004 3022.8999999999996 3184.6 3585.3 3019.3 2706.3 3566.4 3279.5 3522.5 3026.6 True False 3571.8965168504274 3405.8115206914094 3228.0521721743976 3381.305509248645 3333.480896613533 2994.7118218457244 2809.289727444182 3495.2653542133235 3141.674019768453 3300.0887488463904 2654.347387198163 1.345677861939841 1.2831069275700444 1.216137792567467 1.2738745220601415 1.2558570564993905 1.1282290465404525 1.0583730452891364 1.3168078040843043 1.183595649507164 1.2432768840893316 1.0 11.374141480159611 -14.999999999986667 0.09603746150474386 0.24726049727456023 1.4012983559443823 0.06930670695410879 0.09947807585983999 55.87030366637351 0.38821211797057925 8.507514406119686 0.5740648427600319 1.0000000000307012e-15 14.999999999986667 1.1540378586698221 TELIQK ddPTM_A549_PD325901_60min_R1 2 TELIQK 6 0 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 ; 132.94 0.031252999999999996 17337300.0 8909.3 9193.0 8735.2 9553.3 11583.099999999999 10673.5 9680.2 9844.3 10071.7 9809.900000000001 11363.3 False True 9813.765577319991 9967.7263728363 9328.023201024786 10143.385643881506 10769.543015525676 10586.57855478764 10048.585308208689 9647.947713796051 9648.421474280209 9190.50123983199 9965.686137893637 0.9847556346375408 1.000204725988199 0.9360141461364918 1.0178311361133663 1.0806624718568494 1.062303027438634 1.0083184608834743 0.9681167538590831 0.9681642930327639 0.9222145984395319 1.0 13.282753422757914 -6.3237302929215895 24.99995490919648 0.9992509505167315 0.9763114192797411 0.07734138681858982 0.04386735834791883 555.0126259114095 222748.92781727572 0.006109019306373994 0.014196086816162764 4.7453659214636627e-07 6.3237302929215895 -0.02293953123699044 TELNLS(ph)K ddPTM_A549_PD325901_60min_R1 1 TELNLSK 7 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 TELNLS(1)K 52.49 0.0472 1950900.0 1957.8 1684.4 1840.2 2011.2 2383.2 1637.9 2248.9 2095.8 1911.1 2176.5 2334.5 True False 2156.554414743814 1826.3502994023145 1965.0870380215454 2135.4272562333963 2215.8122535936677 1624.5614854440146 2334.4831201452985 2053.9976248767057 1830.7831130292718 2039.075418556186 2047.3712996147844 1.0533284388374364 0.8920464498774329 0.959809800201497 1.0430092756673788 1.0822718155766742 0.7934864993710119 1.1402343681307512 1.0032365039322217 0.8942115743117705 0.9959480329434337 1.0 10.999557049718463 TELPS(ph)PESAQSPSPSGDVR ddPTM_A549_PD325901_60min_R1 1 TELPSPESAQSPSPSGDVR 19 0 H7C1I9;O15021-2;O15021-3;O15021-6;O15021 H7C1I9 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 T(0.016)ELPS(0.978)PES(0.002)AQS(0.003)PS(0.001)PSGDVR 48.848 0.028589999999999997 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TEMDKS(ph)PFNSPS(ph)PQDSPR ddPTM_A549_MK2206_60min_R1 4 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 2 T(0.018)EMDKS(0.982)PFNS(0.007)PS(0.977)PQDS(0.016)PR;T(0.211)EMDKS(0.786)PFNS(0.296)PS(0.696)PQDS(0.011)PR;T(0.32)EMDKS(0.583)PFNS(0.214)PS(0.873)PQDS(0.01)PR;T(0.308)EMDKS(0.695)PFNS(0.327)PS(0.618)PQDS(0.053)PR 86.211 1.7919000000000002e-05 43256500.0 12890.7 15357.7 14158.8 11055.4 19773.7 14381.8 13804.9 14771.599999999999 22472.6 20757.1 22572.5 True False 15066.335012643536 16139.341331959615 16166.730744279981 13763.973496295766 16865.014924061998 15903.672530133796 16313.071636480025 16865.519536127733 17382.59198136803 16068.056693567956 16967.125280692602 0.8879721675532135 0.9512124808982847 0.9528267444737138 0.8112142315562556 0.9939818705324939 0.937322750143836 0.9614517112715113 0.9940116111077173 1.0244865699876808 0.9470111422971738 1.0 14.050454531076547 -7.831414720069477 1.0626572188803458 1.0117768292207656 0.914931883906725 0.30891926416460735 0.047110810570587594 0.289597419367075 0.6591602391341476 0.007441935116956074 0.012086718525023656 1.4742980120443318e-08 7.831414720069477 -0.09684494531404064 TEMDKS(ph)PFNSPS(ph)PQDSPR ddPTM_A549_PD325901_60min_R1 3 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 2 T(0.001)EMDKS(0.999)PFNS(0.374)PS(0.616)PQDS(0.01)PR;T(0.005)EMDKS(0.995)PFNS(0.051)PS(0.555)PQDS(0.394)PR;T(0.001)EMDKS(0.86)PFNS(0.44)PS(0.453)PQDS(0.246)PR 107.88 2.1550999999999997e-09 111335000.0 18543.9 19525.4 19204.5 20506.1 23707.0 20136.5 20211.9 20929.300000000003 21223.7 22047.899999999998 23355.800000000003 True False 20426.463076702352 21170.873982397265 20507.83285603998 21772.715224267915 22041.902104710094 19972.51502023531 20981.07491487607 20511.848692781776 20331.741696404857 20655.791831281847 20483.18466461469 0.9972308218257522 1.033573359272134 1.0012033378514558 1.0629555696913149 1.0760974167648907 0.9750688355965673 1.0243072675667226 1.0013993931430303 0.992606473520133 1.0084267739364445 1.0 14.322152418259355 -7.282310083167905 24.9904665123013 0.9978114521412937 1.0339396609229514 0.3256943434774854 0.024149601659452322 678.8434979768696 812840.9835420841 0.003513019112345938 0.005620768549829171 5.2202333496303474e-08 7.282310083167905 0.03612820878165768 TEMDKS(ph)PFNSPSPQDS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 2 TEMDKS(0.624)PFNS(0.375)PS(0.033)PQDS(0.968)PR 94.542 9.8566e-07 10680000.0 2888.3 2808.3 2794.9 3052.6 4336.8 3337.1 2949.0 3065.4 5248.9 4095.7 5386.5 True False 3375.7744278447512 2951.2304747808707 3191.258846596331 3800.48713703642 3698.862464924222 3690.2297070123004 3484.7951275257046 3499.9298373937822 4060.032530770925 3170.4785254128115 4048.8833901628404 0.833754421292183 0.7288998448192345 0.7881824540439488 0.9386506774361733 0.9135512457362865 0.9114191127307039 0.8606805362664571 0.8644185322544001 1.0027536334178386 0.7830500955191252 1.0 11.98330837794656 -6.358721095532882 0.258275988512346 1.0231069603205272 0.6663163540105267 0.0 0.08694121327201562 2.426929898224113 0.1970589538176865 0.037934982277069915 0.26562266659087536 4.3780317265040815e-07 6.358721095532882 -0.3567906063100005 TEMDKS(ph)PFNSPSPQDSPR ddPTM_A549_MK2206_60min_R1 4 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKS(1)PFNSPSPQDSPR;T(0.017)EMDKS(0.983)PFNSPSPQDSPR;TEMDKS(1)PFNSPSPQDSPR;TEMDKS(1)PFNSPSPQDSPR 209.24 6.669999999999999e-56 208223000.0 30455.5 32164.300000000003 30581.300000000003 26091.8 42919.4 33276.6 30356.5 31090.8 45649.3 47419.8 47535.8 True False 35595.643834513656 33801.32548516695 34918.18818756178 32484.292171305417 36606.01311498538 36797.90772478066 35871.883109099384 35498.01611158171 35309.8064369527 36707.63424551859 35731.34893866197 0.9962020716211618 0.9459851499922887 0.9772423718876077 0.9091258274930903 1.0244789016453002 1.0298493848622843 1.0039330776646205 0.9934698007768806 0.9882024464726225 1.0273229345058468 1.0 15.124902759478305 -6.7837623175023705 24.99999960253931 0.9994248015646039 0.9577780865952449 0.477386764860789 0.02500020695497636 167.57047405283078 187665.83861804774 0.003311937735722846 0.006262250218206753 1.6452719081443716e-07 6.7837623175023705 -0.04164671496935901 TEMDKS(ph)PFNSPSPQDSPR ddPTM_A549_PD325901_60min_R1 6 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKS(1)PFNSPSPQDSPR;T(0.002)EMDKS(0.998)PFNS(0.001)PSPQDSPR;T(0.092)EMDKS(0.869)PFNS(0.031)PS(0.008)PQDSPR;TEMDKS(0.855)PFNS(0.144)PSPQDSPR;TEMDKS(1)PFNSPSPQDSPR;T(0.004)EMDKS(0.996)PFNSPSPQDSPR 185.64 2.6162999999999996e-40 327153000.0 38667.3 41424.700000000004 41082.0 42498.200000000004 47483.899999999994 43371.899999999994 43395.1 44317.3 46684.5 47156.1 54327.3 True False 42592.775830638246 44915.7048489973 43870.071566134706 45123.21729358498 44148.79467456209 43018.69362630762 45046.524277209865 43433.35668525074 44722.512814721864 44178.65579828964 47645.38650912927 0.8939538316574911 0.942708374091814 0.9207622139391989 0.9470637264100897 0.9266121635114198 0.9028931608743455 0.9454540633976924 0.9115962712765178 0.9386535841440313 0.9272389004510359 1.0 15.540048904647255 -10.289426650163426 0.5726314867155017 1.0049403605724367 0.92396527060706 0.019570909414574067 0.026832105074652616 0.3472653849036965 0.19830825784261533 0.013835599780565993 0.0036330276795691536 5.1353890394199234e-11 10.289426650163426 -0.08097508996537672 TEMDKSPFNS(ph)PS(ph)PQDSPR ddPTM_A549_PD325901_60min_R1 1 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 2 TEMDKS(0.37)PFNS(0.714)PS(0.805)PQDS(0.11)PR 115.66 1.5524000000000002e-10 18210000.0 5608.7 6199.1 5535.9 6132.4 5800.1 5739.1 5631.8 6419.7 5537.2 6666.6 5747.6 True False 6178.091095093286 6721.519912743341 5911.59946407101 6511.184420309106 5392.720985258741 5692.362672392543 5846.121230839211 6291.654047342777 5304.490740131695 6245.669738270925 5040.681637038312 1.225645962184445 1.3334545596679692 1.1727777887485096 1.2917269705084564 1.0698396315358794 1.1292843076154142 1.1597878326380757 1.248175246996849 1.0523359978053257 1.239052609944359 1.0 12.299403123125582 -7.542105720506621 0.20157815366981657 0.9458673524156163 1.3716644458610823 0.0 0.10203065738172166 2.034816659562836 0.2088019332047596 0.11950809899244233 0.2680685465388318 2.870081831631691e-08 7.542105720506621 0.425797093445466 TEMDKSPFNS(ph)PSPQDS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 2 T(0.025)EMDKS(0.378)PFNS(0.6)PS(0.147)PQDS(0.851)PR 77.575 0.00011598 11381000.0 4556.3 4946.1 3802.6 3090.1 5684.0 4663.8 4375.3 4043.6 5898.2 5560.2 6856.2 True False 5325.2920491600735 5197.835363498796 4341.8658592676675 3847.1746387198596 4847.89112954927 5157.320220420113 5170.235375199462 4616.792683005642 4562.26711748996 4304.146958273389 5153.616318506349 1.0333117019280706 1.0085801973332122 0.8424891553677113 0.7465000110514378 0.9406775417371998 1.0007186995858548 1.0032247368965819 0.8958355449215335 0.8852554857658133 0.8351702362508899 1.0 12.331369418679035 -6.974274608391386 24.999883493063034 0.9494878931569681 0.9019306808063993 0.01309707142552774 0.08762715451269594 569.286067888058 553228.4372796359 0.01293064999624187 0.024436114507527775 1.0610244495387378e-07 6.974274608391386 -0.04755721235056887 TEMDKSPFNSPS(ph)PQDSPR ddPTM_A549_MK2206_60min_R1 5 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKS(0.002)PFNS(0.143)PS(0.848)PQDS(0.007)PR;TEMDKSPFNS(0.116)PS(0.881)PQDS(0.003)PR;TEMDKS(0.001)PFNS(0.418)PS(0.579)PQDS(0.003)PR;TEMDKSPFNS(0.348)PS(0.646)PQDS(0.006)PR;TEMDKSPFNS(0.25)PS(0.75)PQDSPR 194.97 5.1906e-49 80788000.0 27576.200000000004 33081.5 28377.3 26048.7 38659.3 31479.3 25807.2 28169.1 44227.99999999999 44162.799999999996 52418.7 True False 32230.388386640047 34765.207047489 32401.627846262152 32430.632669370563 32972.568181665025 34810.4186317318 30496.034186192406 32162.156189250734 34210.42861760298 34186.39280760331 39401.69010747774 0.8179950732753793 0.8823278126562185 0.8223410660273403 0.823077197473207 0.8368313159086396 0.8834752655730725 0.7739778193018375 0.8162633658992949 0.8682477458272899 0.8676377260556989 1.0 15.265969893936207 -10.14045438429299 0.6750408591372559 0.9992751102292486 0.8330305063375527 0.2656228378838278 0.048168202551406 0.23364131053009363 0.2043293071591179 0.019561764605161274 0.006848919960149529 7.236784091605425e-11 10.14045438429299 -0.16624460389169593 TEMDKSPFNSPS(ph)PQDSPR ddPTM_A549_PD325901_60min_R1 2 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKSPFNS(0.017)PS(0.983)PQDSPR;TEMDKSPFNS(0.067)PS(0.932)PQDS(0.001)PR 213.05 4.546900000000001e-56 97517000.0 17778.1 18884.7 19063.1 19554.7 21832.0 22100.0 19220.800000000003 19989.0 20036.6 22213.0 21481.0 True False 19582.919624454506 20476.179944860425 20356.836601732695 20762.54940705409 20298.595636311245 21920.024927231658 19952.25806202533 19590.30371393286 19194.5313811534 20810.467389105714 18838.973179278313 1.039489755524175 1.0869053079486803 1.0805703903291255 1.1021062140420472 1.0774788754749343 1.1635466922020097 1.059094775078907 1.0398817136955725 1.0188735446720727 1.104649769977693 1.0 14.201432712359276 -8.382764523189383 1.9745278575737206 1.0086725542653134 1.0910616602839718 0.1250153723798434 0.04077932520341764 0.15430888964172781 1.1744895158151065 0.00495748403075286 0.006115331869138707 4.1422420854267595e-09 8.382764523189383 0.08238910601865834 TEMDKSPFNSPSPQDS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKSPFNSPS(0.01)PQDS(0.99)PR 65.90100000000001 0.00048767 12082000.0 919.96 999.42 1083.7 1086.8 1826.7 1307.2 1269.1 1180.2 1793.3 2051.5 1994.2 True False 1075.2267571374368 1050.2862091320367 1237.384955474773 1353.0660487883058 1557.994849814857 1445.527036350867 1499.6790425035178 1347.4969642109158 1387.1204133116464 1588.0647251713715 1498.9851028799274 0.7173031640352234 0.7006648745969342 0.8254818230664503 0.9026547670078413 1.0393664665656497 0.9643371595712633 1.0004629396397984 0.8989395302341799 0.9253730478352582 1.059426622799853 1.0 10.549770330317408 -6.098651631760021 1.9275371934456138 0.9657355172302422 0.7048934917224677 0.8284252537348915 0.047844227976381735 0.09403718841903679 0.6623615879538947 0.006174707008900774 0.024137927558184957 7.96798243871936e-07 6.098651631760021 -0.26084202550777447 TEMDKSPFNSPSPQDS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKSPFNS(0.001)PS(0.007)PQDS(0.992)PR;TEMDKSPFNS(0.001)PS(0.025)PQDS(0.974)PR 87.802 5.7173e-07 65009000.0 6212.5 6722.3 5754.8 6244.0 7555.1 7184.0 5955.3 6602.1 7171.2 7242.2 7055.7 True False 6843.188426599218 7288.8118129139 6145.355334423641 6629.677698847115 7024.455839680059 7125.495885847606 6181.932200365199 6470.415936252741 6869.819402519753 6784.926256038414 6187.893629767416 1.105899492790155 1.1779148526164733 0.9931255613155434 1.0713949035830959 1.1351933727316006 1.151522038383105 0.9990365979509506 1.0456572661699008 1.1102032151089138 1.0964839834025133 1.0 12.595232681654913 -14.99999995174586 0.2843161789079796 0.2909570154124917 1.0962177429915048 0.0 0.06291239350337258 46.62570500222143 0.6147474506976789 18.871346497838413 0.02260151195863924 1.0000001111092702e-15 14.99999995174586 0.8052607275790131 TENKEKDENLHEPPS(ph)SDDMKSDDESSQK ddPTM_A549_PD325901_60min_R1 1 TENKEKDENLHEPPSSDDMKSDDESSQK 28 3 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2;H0YNP8 Q99081 TCF12 Transcription factor 12 1 TENKEKDENLHEPPS(0.326)S(0.326)DDMKS(0.326)DDES(0.011)S(0.012)QK 44.301 0.008234100000000001 21098000.0 909.88 1159.6 1359.3 1010.3 1194.3 1007.9 1305.2 1077.1 1194.1 1039.0 1266.8 True False 1002.2503477817461 1257.3235616165534 1451.5502721349224 1072.7039364422226 1110.416488111328 999.6919965681797 1354.8701002328444 1055.6163955313962 1143.9161295946058 973.3973626831507 1110.991630906837 0.9021223201867581 1.1317129010146318 1.3065357395627792 0.9655373691398896 0.9994823158163311 0.8998195564733373 1.219514227237647 0.9501569284277676 1.0296352355605907 0.8761518409356729 1.0 10.117632233617103 TENKEKDENLHEPPSSDDMKSDDES(ph)SQK ddPTM_A549_PD325901_60min_R1 2 TENKEKDENLHEPPSSDDMKSDDESSQK 28 3 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2;H0YNP8 Q99081 TCF12 Transcription factor 12 1 TENKEKDENLHEPPS(0.125)S(0.125)DDMKS(0.306)DDES(0.394)S(0.05)QK;TENKEKDENLHEPPS(0.037)S(0.037)DDMKS(0.277)DDES(0.587)S(0.063)QK 84.946 3.0412e-07 21692000.0 3642.1 3202.3 3417.1 3126.5 4221.2 3522.1 3516.1 3452.3 3167.2 4405.5 5117.6 True False 4011.8433108276904 3472.169059472829 3649.0049546915684 3319.6168042033173 3924.7174743494415 3493.4171853485327 3649.9071095837458 3383.4411682230443 3034.093598234684 4127.335978152666 4488.1676431392725 0.8938710916826594 0.7736273097508902 0.8130277754373838 0.7396374351741892 0.8744587516352836 0.7783615638084863 0.8132287828336998 0.75385801896127 0.6760205588293202 0.9196037907500664 1.0 12.131910849514462 -10.989022081237751 1.2739586087348456 0.9995572906827931 0.7792653888415199 0.5079533735760884 0.062118173111626276 0.2369970245375324 0.6866764797507959 0.044851431094625305 0.010365076489635134 1.0255997794034997e-11 10.989022081237751 -0.22029190184127323 TENNDHINLK ddPTM_A549_PD325901_60min_R1 1 TENNDHINLK 10 0 P61956-2;P61956 P61956-2 SUMO2 Small ubiquitin-related modifier 2 0 71.221 0.006915300000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TENSLANENQQPIKS(ph)EPES(ph)EGEEPK ddPTM_A549_MK2206_60min_R1 1 TENSLANENQQPIKSEPESEGEEPK 25 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 2 T(0.001)ENS(0.001)LANENQQPIKS(0.999)EPES(1)EGEEPK 65.69 6.8512e-05 4199800.0 683.47 682.94 436.17 410.81 1026.8 796.9 789.5 751.03 922.06 761.08 763.88 True False 798.8230267628201 717.6987289274109 498.0254646391363 511.4584684419614 875.759080193735 881.2274290605915 932.9419305464717 857.4908024329131 713.2148822272549 589.1514994069842 574.187513984515 1.391223262971133 1.2499378886646535 0.8673568346743383 0.8907516377232728 1.5252144271067394 1.5347380561193409 1.6248035838892025 1.493398552821959 1.2421288600965454 1.0260611473743622 1.0 9.165378148483393 -6.7400461905649935 24.99968766290543 1.2412639973332311 1.0939361384327893 0.10021599017255967 0.24996167005003989 657.4662782825206 768299.1588257946 0.04227851667327975 0.0879447496370375 1.819507329692172e-07 6.7400461905649935 -0.14732785890044187 TEPAAEAEAAS(ph)GPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDER ddPTM_A549_MK2206_60min_R1 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDER 49 1 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.268)GPS(0.241)ES(0.241)PS(0.241)PPAAEELPGS(0.008)HAEPPVPAQGEAPGEQARDER 59.217 0.00014535 10214000.0 0.0 327.05 274.89 322.25 277.15 205.63 211.5 252.07 187.24 351.87 342.81 True False 0.0 343.6954480565054 313.8735354899514 401.2012644663524 236.38160213838486 227.38963011385312 249.92681229965638 287.8016944319992 144.83043896083893 272.3823226156718 257.6808159253176 0.0 1.3338030106056364 1.2180710246622313 1.556969862213688 0.9173426484604669 0.8824468724895547 0.9699084947483693 1.1168922040180569 0.5620536338367326 1.0570531672587342 1.0 8.009441323791673 -8.736957143247203 24.99140799034393 0.793191919329472 1.0288281524239808 0.005228899696157585 0.39047108185477597 479.93361751481046 489914.91557531786 0.06461075399482893 0.0732450787222446 1.83249524649913e-09 8.736957143247203 0.23563623309450887 TEPAAEAEAASGPS(ph)ES(ph)PSPPAAEELPGSHAEPPVPAQGEAPGEQAR ddPTM_A549_PD325901_60min_R1 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR 46 0 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 2 TEPAAEAEAAS(0.056)GPS(0.58)ES(0.58)PS(0.58)PPAAEELPGS(0.205)HAEPPVPAQGEAPGEQAR 49.854 0.0017813 2557400.0 0.0 0.0 0.0 163.1 0.0 203.71 211.44 0.0 166.39 156.86 0.0 True False 0.0 0.0 0.0 173.1743165730244 0.0 202.05105329983522 219.48646490440757 0.0 159.3972069368114 146.95583283010495 0.0 0.0 TEPAAEAEAASGPS(ph)ESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR ddPTM_A549_MK2206_60min_R1 3 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR 46 0 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.033)GPS(0.466)ES(0.466)PS(0.033)PPAAEELPGS(0.003)HAEPPVPAQGEAPGEQAR;TEPAAEAEAAS(0.098)GPS(0.405)ES(0.405)PS(0.085)PPAAEELPGS(0.007)HAEPPVPAQGEAPGEQAR;TEPAAEAEAAS(0.101)GPS(0.331)ES(0.275)PS(0.275)PPAAEELPGS(0.016)HAEPPVPAQGEAPGEQAR 72.366 1.3875999999999999e-05 155020000.0 447.5 599.11 463.96 724.88 701.4100000000001 984.21 895.47 654.4300000000001 1397.97 581.04 728.8 True False 523.0270596754235 629.6021399942907 529.7565045142343 902.4756325410996 598.2335181522085 1088.3584489342766 1058.1653078485735 747.1974566078204 1081.3320270993597 449.7826604501943 547.818846143261 0.9547445535282768 1.149288938171438 0.9670286231366652 1.6473979288859508 1.0920279986055161 1.9867123166654588 1.9315971243016548 1.3639498930498999 1.9738861390259268 0.8210426925191452 1.0 9.097555088475433 -6.25700377740764 24.91160038683068 1.5173088163397377 1.036247500829217 0.2139621896771302 0.38118839807764326 434.85882503713975 2442277.8530014064 0.056913397744084146 0.14512026654026128 5.533452963066925e-07 6.25700377740764 -0.4810613155105208 TEPAAEAEAASGPS(ph)ESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR ddPTM_A549_PD325901_60min_R1 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR 46 0 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.1)GPS(0.415)ES(0.386)PS(0.093)PPAAEELPGS(0.006)HAEPPVPAQGEAPGEQAR 66.548 9.342399999999999e-05 78048000.0 0.0 0.0 226.12 365.26 252.44 150.2 212.29 209.06 204.31 337.83 227.33 True False 0.0 0.0 241.46586297002054 387.8212806343527 234.70948527072224 148.97682099865128 220.36881211954545 204.89013429560273 195.72356120716353 316.49935614557137 199.36985116360208 0.0 0.0 1.2111453239330285 1.9452353421085125 1.177256660928741 0.7472384622306886 1.1053266621476872 1.0276886555303226 0.9817109260243846 1.5874985826510615 1.0 7.639303450737972 -5.7569019898515785 24.999999999999275 1.0719202799024445 3.166588099476521e-05 0.6513202171466079 0.3276334928348476 49.55112076094275 273005.02123550413 0.041775651840574475 0.1515394163835048 1.7502416328257832e-06 5.7569019898515785 -1.0718886140214499 TEPAAEAEAASGPS(ph)ESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDER ddPTM_A549_MK2206_60min_R1 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDER 49 1 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.018)GPS(0.321)ES(0.321)PS(0.321)PPAAEELPGS(0.018)HAEPPVPAQGEAPGEQARDER 61.261 4.4046000000000005e-05 9690000.0 0.0 193.65 203.34 238.66 391.34 231.76 149.53 0.0 557.24 591.16 289.73 True False 0.0 203.5059578539741 232.17666960066484 297.1317107138546 333.77440440496343 256.28468937016277 176.69766545232912 0.0 431.0260297294271 457.61654542154906 217.7820448587912 0.0 0.9344478236758516 1.0660964715948325 1.364353571510054 1.5326075417345866 1.1767943933869134 0.8113509337599387 0.0 1.9791623777290832 2.101259292143507 1.0 7.766741205073915 -5.4114071892806574 2.0712261714091573 1.29306155584116 1.4293696232059337e-19 0.28921808964894924 0.5439251978773356 0.5230975176712842 3.070651227031699 0.07917637140729254 1.1185492308382399 3.877866114304458e-06 5.4114071892806574 -1.29306155584116 TEPAAEAEAASGPS(ph)ESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDER ddPTM_A549_PD325901_60min_R1 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDER 49 1 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.021)GPS(0.443)ES(0.443)PS(0.087)PPAAEELPGS(0.006)HAEPPVPAQGEAPGEQARDER 78.02 2.3961000000000002e-08 21404000.0 181.04 0.0 430.46 263.2 223.24 239.73 450.16 0.0 465.46 403.88 198.92 True False 199.41904752539597 0.0 459.6736041662616 279.4572662294301 207.56039253619102 237.77771836222811 467.29108513700413 0.0 445.8983348807515 378.3789478734081 174.45410105777387 1.143103236417208 0.0 2.6349257562826325 1.6018956535557878 1.1897707837057574 1.3629815345153933 2.6785904275317183 0.0 2.5559636155133068 2.1689312293558554 1.0 7.446703702504312 -5.74845655195 24.9984103613234 1.6707513097782771 0.5715518064001522 0.22049457573602183 0.8091873280640456 268.76316817499253 517493.53252742725 0.11089973557109495 0.4241211515277016 1.7846105171005574e-06 5.74845655195 -1.099199503378125 TEPAAEAEAASGPSES(ph)PSPPAAEELPGSHAEPPVPAQGEAPGEQAR ddPTM_A549_PD325901_60min_R1 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR 46 0 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAASGPS(0.228)ES(0.764)PS(0.007)PPAAEELPGSHAEPPVPAQGEAPGEQAR 138.62 2.6248e-31 67112000.0 313.12 468.49 0.0 385.62 568.93 384.56 279.65 743.09 332.63 283.58 324.71 True False 344.9077118932389 507.971296465798 0.0 409.43887159343745 528.9703195019489 381.4282708604615 290.29223378035175 728.2684870071721 318.65071785198364 265.6747104039343 284.77272850628265 1.2111683365973354 1.7837778888809261 0.0 1.4377741637728643 1.8575174746421645 1.3394129166130684 1.0193821413413446 2.5573673814453937 1.1189650059659895 0.9329359303381222 1.0 8.153667181821275 -8.97508867006349 24.997087188302213 1.0524838505698575 1.3979184918513465 0.07691295484367078 0.592286752019676 373.7123711246248 375002.6942867948 0.10116740912090944 0.10492983050726307 1.0590374790324001e-09 8.97508867006349 0.34543464128148904 TEPAAEAEAASGPSES(ph)PSPPAAEELPGSHAEPPVPAQGEAPGEQARDER ddPTM_A549_PD325901_60min_R1 1 TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDER 49 1 P55884-2;P55884 P55884-2 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 TEPAAEAEAAS(0.003)GPS(0.054)ES(0.857)PS(0.085)PPAAEELPGS(0.001)HAEPPVPAQGEAPGEQARDER 87.029 7.8737e-13 26128000.0 165.99 265.21 378.27 159.66 0.0 352.55 469.39 420.04 263.09 349.82 526.9 True False 182.84118260462043 287.5601774545758 403.9416769222964 169.52183558583127 0.0 349.67894968758003 487.2528933100636 411.6619726849946 252.03324222011972 327.73230549934544 462.0946402942942 0.3956790809955605 0.6222971495004516 0.8741535644409077 0.3668552300841834 0.0 0.7567258288580885 1.0544439403143626 0.8908607388798525 0.5454147705751516 0.7092319990784195 1.0 8.85204454596239 -7.494180797258826 24.899984247202944 0.8120741701828141 0.4698493203907434 0.38706110148446204 0.2346215419138689 703.6516018560939 610529.0247996215 0.04021417423856389 0.0642089281469593 3.204934828940501e-08 7.494180797258826 -0.34222484979207074 TEPDRS(ph)SLR ddPTM_A549_MK2206_60min_R1 1 TEPDRSSLR 9 1 Q96DU7 Q96DU7 ITPKC Inositol-trisphosphate 3-kinase C 1 TEPDRS(0.625)S(0.375)LR 62.466 0.0019985 3074500.0 552.14 519.9 335.91 341.6 362.17 427.14 272.62 341.68 496.0 556.93 657.69 True False 645.3277334730467 546.3606893275554 383.5470890408149 425.2920153350069 308.8952727636979 472.3396712874155 322.15152514956173 390.11418635111465 383.65679194924223 431.1191261953164 494.36742167942015 1.3053605581063532 1.105171306538583 0.7758340704123737 0.8602751651600412 0.6248293459838978 0.9554425525914026 0.6516439211450823 0.7891179095617873 0.7760559760307792 0.8720621693289531 1.0 8.949439863983532 -5.558098605055694 3.4026238019472985 0.8472098817534031 1.2822750147887425 0.6491687899514327 0.11284088643002682 0.128827589954814 2.9435644640138015 0.017917301288704866 0.10003689981202785 2.7663134922212165e-06 5.558098605055694 0.43506513303533945 TEPDRS(ph)SLR ddPTM_A549_PD325901_60min_R1 2 TEPDRSSLR 9 1 Q96DU7 Q96DU7 ITPKC Inositol-trisphosphate 3-kinase C 1 TEPDRS(0.605)S(0.395)LR;T(0.004)EPDRS(0.606)S(0.39)LR 69.01 0.001172 5403700.0 1301.24 984.53 1105.49 1286.24 1575.19 1133.0 867.47 1144.28 1240.88 1360.8200000000002 1441.51 True False 1433.3409268777416 1067.4997983083354 1180.515199251406 1365.6881235370133 1464.5540885104945 1123.7732236449522 900.4820455477982 1121.4564377297052 1188.730128876439 1274.8975929610056 1264.2134084847755 1.1337808294532123 0.844398414969976 0.933794240219548 1.080267077038726 1.1584706179203064 0.8889110146299206 0.7122864221374396 0.887078423787506 0.9402922962992403 1.0084512507180536 1.0 10.304024306226726 TEPLT(ph)PNPASK ddPTM_A549_MK2206_60min_R1 2 TEPLTPNPASK 11 0 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 T(0.049)EPLT(0.951)PNPASK;T(0.001)EPLT(0.999)PNPASK 120.87 1.891e-07 7714100.0 4375.2 5198.2 4562.7 3882.6 5709.9 4686.3 4196.3 4084.5 7621.1 5883.7 6468.1 True False 5113.6267966299765 5462.766176692632 5209.759468805709 4833.8371742965355 4869.981273858793 5182.201155485823 4958.713392212992 4663.490383256639 5894.9330183959055 4554.568083592882 4861.892259521445 1.0517770702580953 1.1235884888223193 1.0715497569085384 0.9942295954481576 1.001663758451559 1.0658815290151875 1.019914290058965 0.9591924572420831 1.2124770981609827 0.9367891842262229 1.0 12.247302207980116 -8.740711033794316 24.999861514802035 1.1003364495336851 1.0380073030533756 0.0 0.07896084672019682 425.30850074184616 512952.0805528325 0.014394742440443505 0.016313932617661214 1.816724053086437e-09 8.740711033794316 -0.062329146480309516 TEPS(ph)SPLSDPSDIIR ddPTM_A549_PD325901_60min_R1 1 TEPSSPLSDPSDIIR 15 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 T(0.011)EPS(0.596)S(0.393)PLSDPSDIIR 159.0 1.4130999999999998e-19 7949500.0 2574.8 2698.3 2132.2 2706.2 3444.7 2792.4 2858.8 3175.5 2605.6 2753.2 3607.9 True False 2836.191800532422 2925.695210684675 2276.903913960188 2873.355827773873 3202.7561555698685 2769.6596202172677 2967.5931983953865 3112.162161368444 2496.095693218077 2579.3624821359467 3164.151172362471 0.8963515477090235 0.9246382525080951 0.7195939100027793 0.9080968864166249 1.0122007391886316 0.8753246824643144 0.9378797145711825 0.9835693656333082 0.7888673951549543 0.8151830749003375 1.0 11.627602813173057 -11.165714053409415 1.5693747508860434 0.9998698444606083 0.8811916493398468 0.0 0.09558465635069077 0.5008778415434629 2.218018504991932 0.0607531868594737 0.01293511518386459 6.827881050323254e-12 11.165714053409415 -0.1186781951207615 TEPSS(ph)PLSDPSDIIR ddPTM_A549_MK2206_60min_R1 2 TEPSSPLSDPSDIIR 15 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 T(0.002)EPS(0.126)S(0.872)PLSDPSDIIR;TEPS(0.128)S(0.87)PLS(0.002)DPSDIIR 124.51 2.3037e-07 11169600.0 2034.5700000000002 2408.5 1568.34 1813.55 2547.5 2284.5 1377.43 2006.0 2800.8999999999996 2705.4700000000003 3116.6000000000004 True False 2377.9556755392778 2531.0823624647387 1790.7541949518372 2257.8698314133535 2172.7661246528432 2526.2442736716303 1627.6912012572845 2290.3566431173513 2166.50062211821 2094.302447969482 2342.6622062158194 1.0150655392099697 1.0804299295685829 0.7644099051926493 0.9638051211235299 0.9274773455975904 1.0783647198340034 0.6948040553770441 0.9776725970309825 0.9248028232025097 0.8939839650858066 1.0 11.193933228384925 -10.692260875700349 0.9716010104266964 0.9996341362701542 0.9341983330928213 0.0 0.11610095120443507 1.5776828729544377 2.667999651525491 0.07031063350802483 0.018824434949077946 2.0311365640453063e-11 10.692260875700349 -0.06543580317733289 TEPSS(ph)PLSDPSDIIR ddPTM_A549_PD325901_60min_R1 1 TEPSSPLSDPSDIIR 15 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 TEPS(0.014)S(0.986)PLSDPSDIIR 261.41 1.7944999999999996e-78 9819400.0 3026.2 3214.8 3027.9 3368.1 3371.0 2740.8 2917.4 2882.1 3201.8 3472.6 4635.4 True False 3333.417596229306 3485.7224783415822 3233.3915022418387 3576.139887489904 3134.2325893186685 2718.479833509343 3028.4232534625376 2824.614254536291 3067.2394805594245 3253.339443362376 4065.2751862216232 0.8199734196413588 0.8574382590767016 0.7953684201258316 0.8796796584916224 0.770976734844784 0.668707457424542 0.7449491399073617 0.6948150187002626 0.7544973808796939 0.8002753305333108 1.0 11.989137299043517 -10.642635530552331 0.9315033906125111 0.9990444043060916 0.7760901499611864 0.1070700980259397 0.08272168954107686 0.3016760804314076 0.4694358817550118 0.044253571270853616 0.012100715735066547 2.2770075437916558e-11 10.642635530552331 -0.22295425434490523 TEPTS(ph)PTPSAFK ddPTM_A549_MK2206_60min_R1 2 TEPTSPTPSAFK 12 0 Q86XN7-2;Q86XN7 Q86XN7-2 PROSER1 Proline and serine-rich protein 1 1 TEPT(0.004)S(0.98)PT(0.016)PSAFK;TEPT(0.117)S(0.843)PT(0.035)PS(0.005)AFK 142.1 1.0513000000000001e-11 18526400.0 8870.8 11441.4 8909.7 10416.9 11651.4 9136.2 8002.2 8474.8 16560.4 13840.599999999999 13004.9 True False 10367.974169762569 12023.718389829373 10173.229434154835 12969.04096763241 9937.49449451625 10102.986619881269 9456.096157845437 9676.128852986503 12809.49584152467 10713.998847285828 9775.424413019342 1.0606162690955947 1.2299945129559444 1.040694398967034 1.3266985063441 1.0165793396428964 1.0335087453006813 0.9673335661264375 0.9898423274696296 1.3103774629431348 1.096013676195629 1.0 13.254943624960974 -4.919090017684191 15.275750915021511 1.1222124784805791 0.00017172753686194508 0.0 0.12491490746572068 5277703.183664122 16991776.602808576 0.019679639250849715 193501088.99596378 1.2047861943858996e-05 4.919090017684191 -1.1220407509437171 TEPTS(ph)PTPSAFK ddPTM_A549_PD325901_60min_R1 2 TEPTSPTPSAFK 12 0 Q86XN7-2;Q86XN7 Q86XN7-2 PROSER1 Proline and serine-rich protein 1 1 TEPT(0.085)S(0.894)PT(0.02)PS(0.001)AFK;TEPT(0.083)S(0.852)PT(0.057)PS(0.008)AFK 144.28 8.6029e-12 31056000.0 15340.8 16646.2 15754.300000000001 17990.7 20786.1 18091.7 16505.1 18954.8 19114.2 18381.4 20281.5 True False 16898.186722699935 18049.033693843987 16823.481536301937 19101.9446791558 19326.156044152114 17944.36719348401 17133.210612437277 18576.73164424705 18310.896645421002 17220.795267010664 17787.004075021327 0.9500299573456793 1.0147315207056502 0.945829970316784 1.0739270423837746 1.0865323897514731 1.008847083960793 0.9632431937482836 1.0443991335412552 1.0294536712416562 0.9681672750721522 1.0 14.118535912633947 -6.240956234153795 24.856607272226483 1.0207863314382646 0.9746505907273756 0.24744516306191622 0.039860038593001336 890.9677024296099 1081200.9176578664 0.005204588288764151 0.013751247566517239 5.741743214709021e-07 6.240956234153795 -0.046135740710888995 TEPVSGEENS(ph)PDISATR ddPTM_A549_MK2206_60min_R1 1 TEPVSGEENSPDISATR 17 0 Q86T82;Q86T82-2 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 1 TEPVSGEENS(0.999)PDISATR 77.562 0.00038997 1506600.0 346.92 575.98 513.67 448.88 681.33 780.38 553.6 443.69 678.18 655.24 1125.4 True False 405.47161462033074 605.2949217905086 586.5161299979022 558.8556201509887 581.1072595523935 862.95929362568 654.1819540855306 506.5844162436378 524.5733128309215 507.22082891605606 845.9321205401019 0.47931932689995205 0.7155360425420969 0.6933371079743722 0.6606388462873077 0.6869431310651429 1.020128297143637 0.7733267696087192 0.5988475953841298 0.6201127727553334 0.5995999165893016 1.0 9.72439809273094 -10.836377988612622 1.0320445524059187 1.0036895645778792 0.6978657245276013 0.0 0.17186566848608434 0.42688268815716807 0.7914440192533058 0.09662166672661884 0.022628409160985317 1.4575451322792016e-11 10.836377988612622 -0.30582384005027785 TEQELPRPQS(ph)PSDLDSLDGR ddPTM_A549_MK2206_60min_R1 1 TEQELPRPQSPSDLDSLDGR 20 1 P54259 P54259 ATN1 Atrophin-1 1 TEQELPRPQS(0.73)PS(0.269)DLDS(0.001)LDGR 123.65 3.2666e-15 25640000.0 1664.0 1851.6 1791.4 1348.8 1875.9 1546.6 1505.4 1456.4 2268.2 2457.1 2203.8 True False 1944.8425191059341 1945.838531176961 2045.4474570799193 1679.256060549932 1599.9575949897046 1710.260185450009 1778.9116937867743 1662.8491600379398 1754.4563215711125 1902.0394034699384 1656.5356382142147 1.174042063593948 1.1746433256785358 1.2347741937414403 1.0137156254363537 0.9658455623173295 1.0324318692555934 1.0738746892910098 1.0038112804083896 1.0591117275704727 1.1482031292247854 1.0 10.693953526126197 -6.26791391692233 24.998583561286782 1.0251609187591368 1.1925022095817246 0.6711766292808569 0.04852625166161693 142.07346372533777 548555.2332518585 0.004820121074250179 0.011452706102940479 5.396175714630244e-07 6.26791391692233 0.16734129082258775 TEQELPRPQS(ph)PSDLDSLDGR ddPTM_A549_PD325901_60min_R1 2 TEQELPRPQSPSDLDSLDGR 20 1 P54259 P54259 ATN1 Atrophin-1 1 TEQELPRPQS(0.97)PS(0.03)DLDSLDGR;TEQELPRPQS(0.877)PS(0.123)DLDSLDGR 199.92 2.0437999999999997e-55 72164000.0 4919.9 4513.0 5160.3 4744.9 5426.9 5675.6 5094.9 5821.0 5099.0 5579.1 5787.0 True False 5419.364626161049 4893.326348374877 5510.508989404728 5037.981696550236 5045.733265788634 5629.37979533918 5288.789207536254 5704.89558851384 4884.706762250144 5226.83467386484 5075.235686815489 1.0678055090603067 0.9641574599356678 1.085764155489369 0.9926596531542304 0.9941869850293854 1.1091858866699045 1.0420775573586734 1.1240651549117393 0.962459098193153 1.0298703343852929 1.0 12.309259105246534 TERT(ph)PQRL ddPTM_A549_MK2206_60min_R1 1 TERTPQRL 8 2 P07204 P07204 THBD Thrombomodulin 1 TERT(1)PQRL 60.641000000000005 0.020961 17021000.0 531.9 633.75 474.29 419.3 750.47 507.03 662.75 603.51 900.49 643.16 708.36 True False 621.6717162935371 666.0051680348884 541.5514538452801 522.0285188230923 640.0768571415974 560.6835780607254 783.1630962250463 689.0593906718602 696.5304527870425 497.86970930598056 532.4546622585627 1.1675580295541672 1.2508204270572671 1.0170846312963635 0.9804187207390676 1.2021246173834286 1.0530165623537249 1.4708540496256153 1.2941184283165303 1.308149786561177 0.935046201293684 1.0 9.056514876954743 TERT(ph)PQRL ddPTM_A549_PD325901_60min_R1 1 TERTPQRL 8 2 P07204 P07204 THBD Thrombomodulin 1 TERT(1)PQRL 72.848 0.010216 19661000.0 946.62 653.93 721.3 887.85 831.81 918.31 954.58 909.51 721.58 740.31 1069.9 True False 1042.7201655351876 709.0389760675349 770.251755529258 942.6904780463507 773.3865351887162 910.8315878247098 990.9070642662194 891.3691095532081 691.2545019620433 693.5667002579047 938.3090826548973 1.1112757883413686 0.7556560936843386 0.8208934238916992 1.0046694585744138 0.8242343056090417 0.9707159449502062 1.0560561360681906 0.9499738689847539 0.7367023454640066 0.7391665636396627 1.0 9.87391942015163 -4.411025546629952 16.95724100977597 0.8988715663287159 0.9107778619863404 0.0 0.12897578480945188 0.0 0.0 0.017104376748851513 0.0 3.881275343808977e-05 4.411025546629952 0.011906295657624466 TES(ph)DSGLK ddPTM_A549_MK2206_60min_R1 2 TESDSGLK 8 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 T(0.001)ES(0.997)DS(0.002)GLK;T(0.07)ES(0.895)DS(0.036)GLK 68.557 0.0074819000000000005 9896200.0 4919.4 5626.5 4457.3 4690.5 6292.1 4487.1 4511.9 4776.9 6201.9 7607.0 7500.3 True False 5749.674452217381 5912.864817275421 5089.412163917788 5839.672710564549 5366.540425094469 4961.921943704084 5331.653827020422 5454.040203642702 4797.179552399203 5888.5734167090495 5637.768512250686 1.0198493321823212 1.0487952466347208 0.9027352139164037 1.0358127861892752 0.9518908790655651 0.8801216177858296 0.9457028637190251 0.967411164859155 0.8509004124548727 1.0444865559686198 1.0 12.46090852647886 -5.820178226983234 0.7379617033635245 0.9302029945781721 1.0561559370609626 0.0853691187641441 0.06260705559700226 1.7590507734811598 1.0420459291763287 0.010541709307524164 0.15571958159338598 1.5129402363760756e-06 5.820178226983234 0.12595294248279043 TES(ph)DSGLKK ddPTM_A549_PD325901_60min_R1 1 TESDSGLKK 9 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 T(0.016)ES(0.979)DS(0.005)GLKK 60.49 0.013541 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TES(ph)FHSYRDFQTINLNR ddPTM_A549_PD325901_60min_R1 1 TESFHSYRDFQTINLNR 17 1 Q9Y597-3;Q9Y597-2;Q9Y597 Q9Y597-3 KCTD3 BTB/POZ domain-containing protein KCTD3 1 T(0.231)ES(0.76)FHS(0.009)YRDFQTINLNR 50.232 0.0082425 1891000.0 551.76 751.19 712.81 651.41 766.75 441.12 669.94 823.36 503.72 927.11 775.92 True False 607.774269015756 814.4954176015347 761.1855730747407 691.6461162405508 712.8961251439008 437.5276649728699 695.4349333052351 806.9374388865753 482.55040013348537 868.5721163784174 680.4867589621347 0.893146355915465 1.1969305895735391 1.1185898374212104 1.016399080704283 1.047626740351563 0.642962789812661 1.0219668849485022 1.185823865430241 0.7091253338558151 1.2763982618899843 1.0 9.410423279548791 -7.038213582368252 24.878534305834204 0.8842979273168909 1.0659216230686248 0.0 0.19497538926088775 627.3568100563834 408432.8808586024 0.025000901802129355 0.04330924837391171 9.157700113819457e-08 7.038213582368252 0.18162369575173387 TES(ph)GEETDLISPPQEEVK ddPTM_A549_MK2206_60min_R1 4 TESGEETDLISPPQEEVK 18 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 T(0.216)ES(0.784)GEETDLISPPQEEVK;T(0.002)ES(0.997)GEETDLISPPQEEVK;T(0.006)ES(0.99)GEET(0.003)DLISPPQEEVK;T(0.121)ES(0.879)GEETDLISPPQEEVK 406.55 0.0 60555100.0 9279.900000000001 10651.230000000001 9858.41 9329.15 19273.799999999996 14628.199999999999 12573.130000000001 14564.67 20190.199999999997 13690.9 16254.099999999999 True False 10846.120248227862 11193.33211191834 11256.480777800194 11614.792168801461 16438.649551848463 16176.146414586714 14857.504971769165 16629.256574931194 15617.151937124174 10598.116181256994 12217.75837966134 0.887734059816012 0.9161526823571546 0.9213212790767441 0.9506483765578779 1.3454718157803445 1.323986439404042 1.2160581761464655 1.361072633635773 1.2782338176798238 0.8674354044273348 1.0 13.576691994395095 -6.638097244513208 7.311482328496837 1.1853428827860562 0.9138758918997006 0.47332264638658683 0.14196059253523094 0.16346167675151677 9.855153209654299 0.020618888611295055 0.04306672508299898 2.3009265505926384e-07 6.638097244513208 -0.2714669908863555 TES(ph)GEETDLISPPQEEVK ddPTM_A549_PD325901_60min_R1 2 TESGEETDLISPPQEEVK 18 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 T(0.009)ES(0.99)GEETDLISPPQEEVK;T(0.021)ES(0.978)GEET(0.001)DLISPPQEEVK 180.64 6.9698e-32 62205000.0 14064.9 14681.5 14379.5 15134.8 16232.1 14351.0 15308.6 14992.0 14814.6 15747.3 15987.1 True False 15492.758293967874 15918.761529728727 15355.379340957941 16069.642222375285 15092.013293705011 14234.130214058883 15891.177150187348 14692.972799003517 14191.993881159247 14753.012790548968 14020.788050576799 1.1049848437963172 1.1353685308062158 1.095186610450633 1.1461297442346117 1.0764026415108774 1.0152161321255624 1.133401139284293 1.04794200910833 1.0122108564771726 1.0522242214439612 1.0 13.775279819105391 -8.05976150125282 0.5054712977653386 0.997739923460193 1.1233235531796757 0.4553155978880098 0.037110315459822824 0.37392310005759616 0.2081021620230803 0.010068507567901555 0.01672282751042593 8.714420228657869e-09 8.05976150125282 0.12558362971948267 TES(ph)ITATSPASMVGGKPGSFR ddPTM_A549_PD325901_60min_R1 2 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.01)ES(0.73)IT(0.226)AT(0.017)S(0.017)PASMVGGKPGSFR;T(0.021)ES(0.95)IT(0.027)AT(0.002)SPASMVGGKPGSFR 138.24 1.1675e-18 14570400.0 6577.0 6074.5 6645.200000000001 6177.7 7725.9 7442.9 6983.6 7350.1 6644.7 7182.5 8314.0 True False 7244.692198268504 6586.4194334596 7096.183232833802 6559.282498425337 7183.259436908074 7382.287490085632 7249.364719572553 7203.496489458093 6365.446366566683 6728.995724226882 7291.430706788314 0.9935899399720969 0.9033096107362923 0.9732223370411055 0.8995878534947404 0.9851646029112596 1.0124607620851052 0.9942307636309844 0.9879400599324966 0.873003752286977 0.922863563382999 1.0 12.831986209100647 -4.940181304550211 16.88325226554131 0.9504745150826629 1.4347226206061794 0.04660641262352716 0.04563917245607436 14126894.445490975 79150326.00975433 0.007532668400434305 237454306.28141007 1.1476744028116268e-05 4.940181304550211 0.4842481055235165 TES(ph)LEGDDESK ddPTM_A549_MK2206_60min_R1 2 TESLEGDDESK 11 0 Q5T200 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.002)ES(0.998)LEGDDESK;T(0.004)ES(0.996)LEGDDESK 105.65 0.00017153 3701300.0 2592.13 2598.1 2215.09 2017.02 3943.8 2892.3 2531.8999999999996 3200.7 3572.1 3432.6 3546.0 True False 3029.618172506046 2730.332192617662 2529.2230700587033 2511.189990547467 3363.672244320269 3198.3612662466453 2991.913456555556 3654.4090267326524 2763.025053471548 2657.1732759557626 2665.4303353787122 1.136633785656825 1.0243494854761335 0.9488985836500371 0.9421330421643415 1.2619621678622295 1.1999417969377213 1.1224879588272774 1.3710390319443195 1.036614994883732 0.996902166485707 1.0 11.380152760459435 -4.23354660271505 16.26347248200273 1.066939559989685 1.0707239844372995 0.0 0.13408707653330204 0.0 0.0 0.018358206927909067 0.0 5.840545307558695e-05 4.23354660271505 0.0037844244476146205 TES(ph)LEGDDESK ddPTM_A549_PD325901_60min_R1 2 TESLEGDDESK 11 0 Q5T200 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.006)ES(0.994)LEGDDESK;T(0.002)ES(0.998)LEGDDESK 102.62 0.00022716 4854600.0 4337.0 4588.200000000001 4064.8999999999996 3751.8 5356.299999999999 4107.0 4175.7 3714.6 5194.1 4674.4 4800.8 True False 4777.289047269346 4974.863716289299 4340.768558229419 3983.5401650439826 4980.091966231857 4073.553953671512 4334.608548530715 3640.509388952674 4975.810039969302 4379.257586261906 4210.33203477861 1.1346585038442338 1.1815846529906495 1.030980103795464 0.9461344454876104 1.1828264196492815 0.9675137067629654 1.0295170339834347 0.8646608768336963 1.1818094152355711 1.0401216697609403 1.0 12.039718296110433 -5.7610922969555824 24.999623536860746 1.0554686603103958 1.1581215964248968 0.18155744338130997 0.09242498726250752 13.482481956999598 970684.0187074799 0.013991145363438606 0.04828003949307617 1.7334355661159862e-06 5.7610922969555824 0.10265293611450099 TES(ph)PATAAETASEELDNR ddPTM_A549_MK2206_60min_R1 6 TESPATAAETASEELDNR 18 0 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4 1 T(0.063)ES(0.658)PAT(0.137)AAET(0.137)AS(0.006)EELDNR;T(0.001)ES(0.999)PATAAETASEELDNR;T(0.149)ES(0.851)PATAAETASEELDNR;T(0.145)ES(0.766)PAT(0.025)AAET(0.032)AS(0.032)EELDNR;T(0.009)ES(0.991)PATAAETASEELDNR;T(0.146)ES(0.85)PAT(0.004)AAETASEELDNR 566.87 0.0 391108170.0 41341.54 45243.08 41921.399999999994 39362.97 61585.04000000001 46625.270000000004 43067.54 44292.09 67311.95999999999 66140.04000000001 65811.62000000001 True False 48318.981248388634 47545.759523180925 47866.48488736751 49006.8994170709 52525.962197209155 51559.1251240506 50892.3545427326 50570.62939633675 52065.908535112314 51198.959027747245 49468.778445689866 0.9767571136092726 0.9611266139385236 0.9676100035483701 0.9906632214675353 1.0618002677158416 1.0422558782334934 1.0287772639990622 1.0222736640213699 1.0525003885485822 1.0349752032781017 1.0 15.594230654382468 -6.559407121003768 6.336735226785484 1.0289211785189507 0.9694383591133743 0.7679413327880804 0.01613886420772087 0.09102510783090181 10.248632212692216 0.0031164432202535927 0.0066032234343226205 2.7579912182246535e-07 6.559407121003768 -0.059482819405576426 TES(ph)PATAAETASEELDNR ddPTM_A549_PD325901_60min_R1 5 TESPATAAETASEELDNR 18 0 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4 1 TES(1)PATAAETASEELDNR;T(0.159)ES(0.841)PATAAETASEELDNR;T(0.137)ES(0.854)PAT(0.005)AAET(0.002)AS(0.002)EELDNR;TES(1)PATAAETASEELDNR;T(0.183)ES(0.817)PATAAETASEELDNR 610.84 0.0 582569900.0 55996.55 59102.590000000004 60158.17 62267.61 69126.59 61114.369999999995 62056.85 66513.43000000001 66876.54000000001 69648.38999999998 72333.17 True False 61681.27853351866 64083.37267985765 64240.865176663705 66113.73884969737 64271.376792189265 60616.67483312477 64418.457385561305 65186.76745987355 64065.95159323252 65250.77876913144 63436.64864774345 0.9723287696994815 1.0101948013632527 1.012677475025296 1.042201003032482 1.0131584527593973 0.9555466142248832 1.0154769956917133 1.0275884500432597 1.0099201795634496 1.0285975088542532 1.0 15.953028935159526 -10.830493263750746 1.2401721046479903 1.0002448957098962 1.007602546419129 0.0 0.02425570923403526 2.3241461217455366 6.656368522446916 0.013386497891887407 0.0037830908915318026 1.4774293975047523e-11 10.830493263750746 0.007357650709232777 TES(ph)PGIPVR ddPTM_A549_MK2206_60min_R1 2 TESPGIPVR 9 0 Q5T0B9 Q5T0B9 ZNF362 Zinc finger protein 362 1 T(0.052)ES(0.948)PGIPVR;T(0.123)ES(0.877)PGIPVR 89.04700000000001 0.0011013 5591600.0 1333.92 1782.8200000000002 1572.13 1451.5 2054.96 1753.45 1570.0700000000002 1527.9299999999998 2040.1 2289.3 2356.8999999999996 True False 1559.0530847871316 1873.5579229600942 1795.0816739416402 1807.11756516031 1752.6781061890515 1938.9989151540908 1855.3313956847344 1744.5187565893787 1578.0206073702602 1772.1455400120997 1771.6166828691717 0.8800171616482022 1.057541363815691 1.0132449594200403 1.0200386927005247 0.9893100031946817 1.094479936830263 1.0472532877032885 0.9847044078203715 0.8907234971476006 1.00029851668707 1.0 10.790850772558633 -8.524498569855643 24.977660804016516 0.9478349281307027 1.0182938906957846 0.1146533479191485 0.05792449506595009 60.34537842622909 930516.2734823938 0.010204303041923709 0.011611317134438342 2.9888314892521705e-09 8.524498569855643 0.07045896256508188 TES(ph)PGIPVR ddPTM_A549_PD325901_60min_R1 1 TESPGIPVR 9 0 Q5T0B9 Q5T0B9 ZNF362 Zinc finger protein 362 1 T(0.021)ES(0.979)PGIPVR 74.267 0.0021663 5310800.0 1754.0 1309.9 1460.1 1566.4 1874.5 1813.3 1403.7 1595.7 1738.7 1965.5 1563.9 True False 1932.0647887734447 1420.2898700944493 1559.1911662945638 1663.15297044749 1742.841586673939 1798.5330859976993 1457.1185716341133 1563.8725116975659 1665.628485492121 1841.3979945656708 1371.550214378909 1.4086722954203745 1.0355361803050072 1.1368093927210867 1.2126081517187688 1.2707092809308225 1.3113140642919476 1.0623880601367213 1.1402225710020744 1.2144130546808904 1.3425669547210324 1.0 10.421591726906081 -11.174774832152412 0.49006505111911236 0.9199354754976614 1.2010965215394742 0.0 0.14505921973131392 2.059047626523277 0.4996760265427611 0.29644772360666094 0.023467086952273685 6.6869052243329405e-12 11.174774832152412 0.2811610460418128 TES(ph)PIKLSPAT(ph)PSR ddPTM_A549_PD325901_60min_R1 1 TESPIKLSPATPSR 14 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 2 T(0.221)ES(0.777)PIKLS(0.285)PAT(0.453)PS(0.264)R 52.185 0.011904999999999999 3505600.0 886.4 1253.4 1169.9 1334.0 1250.7 1387.1 1043.3 837.59 1243.2 1097.3 1226.3 True False 976.3866754668082 1359.0284168076826 1249.2964491802015 1416.3981502661838 1162.8551466807655 1375.8039174915389 1083.0033524156654 820.8836103733565 1190.9526273444553 1028.0162907336105 1075.472874156183 0.9078673195108543 1.2636566197673536 1.1616252526688788 1.3170003486861452 1.081250094376525 1.2792548752761392 1.0070020159879818 0.7632769083250217 1.1073757934423756 0.9558737513860524 1.0 10.070755421869478 -7.784463814884843 24.897633541994942 1.0228835675037058 1.1752498224749548 0.32293573707547063 0.13451657087971738 245.20318445204973 265151.2902533737 0.02041656857908998 0.028219403980505042 1.6426165156425264e-08 7.784463814884843 0.152366254971249 TES(ph)PIKLSPATPSR ddPTM_A549_PD325901_60min_R1 1 TESPIKLSPATPSR 14 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 T(0.127)ES(0.737)PIKLS(0.027)PAT(0.091)PS(0.019)R 106.67 5.2537999999999996e-06 27261000.0 3875.0 3840.0 3629.0 3866.2 4230.4 4690.1 4272.8 4211.8 4506.6 5042.4 4786.1 True False 4268.38714737577 4163.61027648117 3875.285762949782 4105.006393222729 3933.2712980877172 4651.9053805977 4435.403742165876 4127.79234490682 4317.203274123653 4724.022003458635 4197.4400415876335 1.0169024703355385 0.9919403815727484 0.9232498200222057 0.9779785661143255 0.9370643199467842 1.1082720264035435 1.056692578862481 0.9834071014735758 1.0285324462885526 1.1254531230115743 1.0 12.03529400176674 TES(ph)RDVDSRPEIQR ddPTM_A549_MK2206_60min_R1 2 TESRDVDSRPEIQR 14 2 Q8IZR5-3;Q8IZR5-2;J3QRP2;Q8IZR5 Q8IZR5-3 CMTM4 CKLF-like MARVEL transmembrane domain-containing protein 4 1 T(0.039)ES(0.961)RDVDSRPEIQR;T(0.234)ES(0.766)RDVDSRPEIQR 131.25 2.9275999999999997e-09 76031000.0 2823.1000000000004 3143.9 2917.0 3168.2 4351.1 5003.3 4432.200000000001 5357.1 6811.299999999999 6993.9 6646.7 True False 3299.5702618317077 3303.9110813173725 3330.6744626002705 3944.4091422259035 3711.058953867317 5532.745885078252 5237.473368673934 6116.485330430688 5268.551425411035 5413.973132525497 4996.140950412202 0.6604237739848953 0.6612926084570905 0.666649419153292 0.7894911655565829 0.7427850796645639 1.107403882314765 1.0483037649772111 1.2242419481632225 1.0545241773005538 1.0836309836452516 1.0 12.286598463287751 -7.192533838148714 4.79325482783801 1.0498767286319446 0.6994894005691096 0.8853915067029261 0.06784229784022947 0.06421064833372102 2.876467412084758 0.011090092328091022 0.019389524841809044 6.418982059216933e-08 7.192533838148714 -0.350387328062835 TES(ph)RDVDSRPEIQR ddPTM_A549_PD325901_60min_R1 2 TESRDVDSRPEIQR 14 2 Q8IZR5-3;Q8IZR5-2;J3QRP2;Q8IZR5 Q8IZR5-3 CMTM4 CKLF-like MARVEL transmembrane domain-containing protein 4 1 T(0.013)ES(0.987)RDVDSRPEIQR;T(0.009)ES(0.991)RDVDSRPEIQR 134.4 1.9374e-09 100600000.0 6797.5 5776.4 6479.3 6410.9 7444.799999999999 5437.9 6527.6 7159.6 7137.7 6433.799999999999 7764.799999999999 True False 7487.577195944979 6263.1975002775625 6919.024261196059 6806.886732789711 6921.902931165715 5393.61554533 6776.011390039777 7016.796161402458 6837.72729102037 6027.56877000082 6809.778825122676 1.099533096188347 0.9197358183163509 1.016042435280035 0.9995753030447486 1.0164651611928115 0.7920397539831752 0.9950413315982711 1.0304000088102792 1.0041041664664037 0.8851342936078743 1.0 12.73339222635311 -12.684318704955606 12.91293508772447 1.0026880454676548 0.991906963761465 0.0 0.08039086362467339 64539368.84335079 0.0 0.0 0.00919439645565432 2.0686227426127653e-13 12.684318704955606 -0.010781081706189743 TES(ph)SSVVR ddPTM_A549_MK2206_60min_R1 2 TESSSVVR 8 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 T(0.006)ES(0.399)S(0.399)S(0.196)VVR;T(0.013)ES(0.329)S(0.329)S(0.329)VVR 79.906 0.004007500000000001 13246800.0 2658.0 2856.8999999999996 2586.1 1958.2399999999998 3145.4 2438.6 2090.1 2091.1 3076.7 3529.6000000000004 3839.7999999999997 True False 3106.605418139164 3002.3040071934847 2952.8478668942635 2438.0088879087334 2682.7158266861848 2696.6510333883293 2469.8441153073845 2387.519828725169 2379.83236248031 2732.2609085863387 2886.271686911218 1.0763385277370543 1.0402014546338292 1.0230664979616986 0.8446914055127642 0.9294744631463052 0.9343025625817597 0.8557212844888213 0.827198575779332 0.8245351167987652 0.9466402352130281 1.0 11.494991392845703 -6.121634625629917 5.049106464599451 0.9030450185958271 1.052374467967414 0.6141302406044798 0.05344571434014512 0.1588405562658399 5.87284031440278 0.01011526493500893 0.027803471874370284 7.557277582686446e-07 6.121634625629917 0.149329449371587 TES(ph)STEGKEQEEK ddPTM_A549_MK2206_60min_R1 1 TESSTEGKEQEEK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 TES(0.462)S(0.462)T(0.076)EGKEQEEK 127.3 1.5654e-08 14418000.0 6983.8 7062.6 7747.8 6493.8 2440.4 1556.5 1655.4 1694.5 2074.5 10427.0 9954.6 True False 8162.4947024831845 7422.056173196375 8846.554542795475 8084.781291517761 2081.4203927783324 1721.207796878919 1956.1647521553234 1934.7005641886085 1604.6290622957729 8071.53345813399 7482.598087016611 1.0908637090432924 0.9919089715742871 1.1822838056938438 1.0804778230099015 0.27816814007288426 0.23002809677369457 0.261428547866222 0.25856000037548366 0.21444811596656996 1.0787073372468403 1.0 12.869323570343356 -6.745502402445005 24.455836651745905 0.513358419708597 1.0864857178442286 0.5038934427122308 0.2904456861553606 155.6374102881092 238829.01315992774 0.04984989728311438 0.10348607128135495 1.7967911405955787e-07 6.745502402445005 0.5731272981356317 TES(ph)STEGKEQEEK ddPTM_A549_PD325901_60min_R1 2 TESSTEGKEQEEK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 T(0.002)ES(0.794)S(0.198)T(0.007)EGKEQEEK;T(0.001)ES(0.745)S(0.244)T(0.011)EGKEQEEK 131.48 1.0711999999999999e-08 75927000.0 13753.3 15170.8 15976.9 15163.6 17590.1 15313.9 14884.0 15663.6 16118.4 15325.3 16172.2 True False 15149.524891355659 16449.29655792724 17061.18851090447 16100.221132965742 16354.632058550671 15189.18867570736 15450.418764837324 15351.17721014351 15440.999701245879 14357.657942567937 14183.121924022375 1.0681375350582343 1.1597796765792852 1.2029219379414224 1.1351676463907654 1.153105229311351 1.070934083276897 1.0893524604529057 1.0823553017719438 1.088688356763894 1.0123058956610917 1.0 13.791887506525363 -10.005892100486125 0.22513561521247333 0.9475124990001591 1.1621963341455874 0.6311778644387745 0.0357886527446673 1.9572312031964993 0.2030806848521169 0.13052829331839866 0.04371780320723776 9.865245550538426e-11 10.005892100486125 0.21468383514542833 TES(ph)VPSDINNPVDR ddPTM_A549_MK2206_60min_R1 2 TESVPSDINNPVDR 14 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 T(0.001)ES(0.745)VPS(0.253)DINNPVDR;T(0.011)ES(0.986)VPS(0.003)DINNPVDR 213.99 2.0625999999999998e-38 43682000.0 2524.5 2922.3 2720.9 2803.5 3937.5 3091.2 2632.1000000000004 2433.8 4446.3 4100.1 4587.700000000001 True False 2950.5738819007993 3071.0325878475032 3106.764533866672 3490.357625853898 3358.298965974708 3418.3087322275073 3110.318499545747 2778.7986031999044 3439.2201492820873 3173.8845623568814 3448.4474759212953 0.855623843049115 0.8905551293128044 0.900916877974678 1.012153338632889 0.9738582331393918 0.9912601992913532 0.9019474767307532 0.8058114912878336 0.9973242084434698 0.920380717560136 1.0 11.7517312775942 -2.0000000001633236 0.10501962731553172 1.0419946817127563 0.5784984675914188 0.0 0.0658578949024542 113.02418546020995 0.8079927362523915 0.36792848656387006 7.603557313965574 0.009999999996239335 2.0000000001633236 -0.46349621412133757 TES(ph)VPSDINNPVDR ddPTM_A549_PD325901_60min_R1 2 TESVPSDINNPVDR 14 0 A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87 A0A2R8Y4X0 KSR1 Kinase suppressor of Ras 1 1 T(0.014)ES(0.681)VPS(0.305)DINNPVDR;TES(1)VPSDINNPVDR 266.07 1.5285999999999998e-83 48951000.0 3449.5 4005.7 4010.8 3897.6000000000004 4129.9 3411.1000000000004 3991.0 4572.1 4717.6 4543.9 4479.0 True False 3799.6907006123174 4343.2743970053725 4282.997006899689 4138.345899908158 3839.83007138154 3383.3211325466023 4142.879688958997 4480.905878756938 4519.335677895918 4256.997378533177 3928.1113947203353 0.9673072677417894 1.1056902314030723 1.090345098832061 1.053520504909915 0.9775257586998547 0.861309874535134 1.0546746954598398 1.140727802368232 1.1505110786751696 1.0837262365458598 1.0 11.939620127331972 -7.990763604542913 24.996650392069164 1.0792091828230845 1.0129234444510846 0.22036526229558295 0.07244522462717934 354.36072572814123 959008.6910358454 0.01361945510364635 0.018804499822954648 1.0214953534286794e-08 7.990763604542913 -0.06628573837199991 TESEVPPRPAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 TESEVPPRPASPK 13 1 A0A3B3IU28;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;Q9Y3L3 A0A3B3IU28 SH3BP1 SH3 domain-binding protein 1 1 T(0.002)ES(0.002)EVPPRPAS(0.995)PK 43.297 0.020536000000000002 6115400.0 884.14 1340.6 754.48 793.75 1296.0 1087.1 899.35 855.59 1381.6 1454.4 1202.9 True False 1033.3612168523562 1408.8308138344314 861.4766090307352 988.2187856327917 1105.3601168008183 1202.1362004414227 1062.7502536250402 976.8725026344835 1068.6698059618416 1125.8500298753308 904.1867316489149 1.1428626197244378 1.5581193181913047 0.9527640462714028 1.0929366147970698 1.2224909723957513 1.3295220537566992 1.175365902225707 1.0803880088496935 1.1819127272670413 1.2451521245198776 1.0 9.820476936977338 -14.999999997357092 0.16080136804631776 0.2318336741627123 1.2532878766808364 0.0 0.16268585144127834 65.0986543221686 0.673984434897432 15.745099432131122 0.22197708782506553 1.0000000060855208e-15 14.999999997357092 1.0214542025181241 TESEVPPRPAS(ph)PK ddPTM_A549_PD325901_60min_R1 1 TESEVPPRPASPK 13 1 A0A3B3IU28;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;Q9Y3L3 A0A3B3IU28 SH3BP1 SH3 domain-binding protein 1 1 T(0.001)ES(0.001)EVPPRPAS(0.998)PK 46.318999999999996 0.01067 14663000.0 1879.6 1860.3 1741.3 2154.3 2080.6 2131.6 2252.0 2167.1 2246.3 1904.7 2606.8 True False 2070.4156083116122 2017.0740097234184 1859.475089287533 2287.3662182297157 1934.4658336803388 2114.240956329727 2337.7010923416847 2123.8754904429384 2151.8958227186695 1784.4369169418649 2286.180125866706 0.905622258231601 0.8822900640686535 0.8133545857777036 1.0005188096727768 0.8461563512835499 0.9247919411110287 1.0225358299164842 0.9290061909000994 0.9412625883548312 0.7805320747705183 1.0 11.158723361205311 -2.0000095503489606 0.0802477341763564 1.0652434011585847 0.5412739583130968 0.0 0.08262221902353244 125.3283728515105 0.7119137283543729 0.6866077692234609 7.288000494765507 0.009999780097506397 2.0000095503489606 -0.523969442845488 TESGYGS(ph)ESS(ph)LRR ddPTM_A549_MK2206_60min_R1 1 TESGYGSESSLRR 13 1 A0A2R8YCI0;A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2U3TZL3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3 A0A2R8YCI0 COL4A3BP Collagen type IV alpha-3-binding protein 2 T(0.002)ES(0.015)GY(0.003)GS(0.676)ES(0.331)S(0.973)LRR 53.754 0.034928 7279100.0 837.05 772.6 708.55 301.58 1136.9 746.15 770.74 533.85 952.91 1028.3 1178.6 True False 978.3235760923201 811.9220399585874 809.0330443865008 375.4671135384408 969.6635160423232 825.1070977457154 910.7734813798445 609.5248723470576 737.0774064845817 796.0063158146332 885.9210922947968 1.1043010315491797 0.9164721858641721 0.913211178086828 0.42381552578895065 1.0945258268212226 0.9313550664071499 1.0280525989291807 0.6880125980161601 0.8319899062063574 0.8985070146063937 1.0 9.79103439552499 TESGYGS(ph)ESS(ph)LRR ddPTM_A549_PD325901_60min_R1 1 TESGYGSESSLRR 13 1 A0A2R8YCI0;A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2U3TZL3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3 A0A2R8YCI0 COL4A3BP Collagen type IV alpha-3-binding protein 2 T(0.048)ES(0.003)GYGS(0.822)ES(0.133)S(0.994)LRR 72.891 0.0024133 34723000.0 907.49 916.46 774.29 1151.4 973.87 921.69 985.34 939.88 784.39 872.93 923.15 True False 999.6177167411716 993.6933005166496 826.8379755840133 1222.519362980872 905.4687308691113 914.1840622253461 1022.837652898737 921.1333560784034 751.4248160897018 817.8130508248341 809.6084023300015 1.234692863691058 1.2273752318489575 1.0212813666513665 1.5100131859582226 1.118403327168085 1.1291681998289327 1.2633733172174044 1.1377517246948528 0.9281336679895478 1.0101340950405409 1.0 9.661080452555122 -8.623340245425787 4.259118707099911 0.9663437753624393 1.2117440887136637 0.4357265845308177 0.11650896634767574 0.13091986743835135 4.333190366451063 0.018768122744901375 0.02130766843108875 2.3804537862808124e-09 8.623340245425787 0.24540031335122436 TESIT(ph)ATSPASMVGGKPGSFR ddPTM_A549_MK2206_60min_R1 1 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.019)ES(0.33)IT(0.59)AT(0.045)S(0.014)PAS(0.001)MVGGKPGSFR 85.376 1.4642e-05 5568600.0 1318.7 1704.2 1906.5 1966.2 2271.8 1456.5 1825.6 2099.1 3299.4 2736.6 2827.2 True False 1541.2643208804059 1790.9365007732654 2176.870367825649 2447.9190882660714 1937.6212294352613 1610.6258632535466 2157.2878890508396 2396.6538532241416 2552.0911680591316 2118.400159348756 2125.12821324949 0.7252570980287775 0.8427427999907738 1.0243477801732448 1.1518924237154655 0.911766742992172 0.7578958545709445 1.0151330520205062 1.1277690627237345 1.2009116213072064 0.9968340480076512 1.0 11.053334169225 -7.9967008200914655 24.699690141521163 1.098633780338494 0.9143952705925052 0.31616939077103556 0.12258658643165005 84.74982906174418 634479.8203610115 0.02119326441472949 0.029200449289866145 1.0076255701696737e-08 7.9967008200914655 -0.18423850974598877 TESITATS(ph)PASMVGGKPGSFR ddPTM_A549_MK2206_60min_R1 1 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.001)ES(0.004)IT(0.014)AT(0.056)S(0.92)PAS(0.004)MVGGKPGS(0.001)FR 53.266000000000005 0.0025681999999999996 2548900.0 1581.4 2018.6 2124.0 2157.9 2685.6 1882.4 1848.3 2242.4 3034.4 2344.9 2707.8 True False 1848.3016584820462 2121.3381178622876 2425.215138348637 2686.585596871813 2290.5517975928074 2081.5943185640076 2184.1121852172805 2560.267067061986 2347.1132449410898 1815.185461396222 2035.3785285218485 0.9080874307072193 1.0422327287705375 1.1915302752603465 1.3199439609019017 1.1253689500479664 1.022706238370178 1.0730741995217208 1.2578825172737411 1.153158104033667 0.8918171416077888 1.0 10.991081408607027 -10.751778937535866 1.0604996663573878 1.0016826578249527 1.1275343908931634 0.23019638828114564 0.1135282511220202 0.7935879292479954 1.618160821595091 0.07184574515127005 0.01940023277988382 1.7710101999203315e-11 10.751778937535866 0.12585173306821074 TESITATS(ph)PASMVGGKPGSFR ddPTM_A549_PD325901_60min_R1 1 TESITATSPASMVGGKPGSFR 21 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.001)ES(0.012)IT(0.023)AT(0.028)S(0.935)PAS(0.001)MVGGKPGSFR 115.88 3.9744999999999994e-15 7052800.0 2491.8 2925.6 2627.4 3140.2 3426.2 3318.1 2917.8 3438.2 3463.8 3742.6 3930.4 True False 2744.765701633793 3172.1505793940914 2805.7111638396964 3334.163022088358 3185.55553174833 3291.07849371255 3028.8384756814235 3369.6224037842803 3318.228531688968 3506.2915972838878 3446.9857168584062 0.796279975344772 0.9202679790287033 0.8139607745160112 0.9672691725358018 0.9241568702093884 0.9547699828335957 0.8786919135951385 0.9775562420535252 0.9626464407613536 1.0172051424917226 1.0 11.75111960533993 -2.000000000019066 0.1801653266425873 1.0046627959606542 0.24589983234341486 0.6181333046625415 0.042452890054046004 23.962345231093632 0.25175093657552206 0.039918049625759955 5.034639102874169 0.009999999999560987 2.000000000019066 -0.7587629636172394 TESRS(ph)TEPELIQVK ddPTM_A549_MK2206_60min_R1 3 TESRSTEPELIQVK 14 1 Q15758;M0QXM4;Q15758-3;Q15758-2 Q15758 SLC1A5 Neutral amino acid transporter B(0);Amino acid transporter 1 TES(0.016)RS(0.982)T(0.001)EPELIQVK;TES(0.099)RS(0.883)T(0.018)EPELIQVK;T(0.001)ES(0.011)RS(0.977)T(0.011)EPELIQVK 222.93 1.9171e-47 82143000.0 15072.3 15424.0 13856.7 12626.2 15747.2 11905.1 12332.8 12029.5 16944.0 21131.0 20887.0 True False 17616.13575764445 16209.015718769408 15821.788421636329 15719.619566811649 13430.807740189695 13164.889780034191 14573.510121651065 13734.718463798687 13106.211054007988 16357.49242388314 15700.181448126092 1.1220338959679372 1.0324094515929336 1.0077455775853312 1.001238082422791 0.855455574482723 0.8385183205386137 0.9282383244934088 0.874812721698704 0.8347808652601458 1.0418664572717726 1.0 13.93849361209304 -6.034361451484731 1.226036200661392 0.908188037623538 1.1007205912803335 0.49084148412974227 0.06573908350896131 0.3896622986801283 0.964168562433086 0.01053942353606299 0.0661521131190328 9.239288929695242e-07 6.034361451484731 0.19253255365679556 TESRS(ph)TEPELIQVK ddPTM_A549_PD325901_60min_R1 4 TESRSTEPELIQVK 14 1 Q15758;M0QXM4;Q15758-3;Q15758-2 Q15758 SLC1A5 Neutral amino acid transporter B(0);Amino acid transporter 1 TES(0.019)RS(0.946)T(0.034)EPELIQVK;T(0.001)ES(0.037)RS(0.891)T(0.071)EPELIQVK;TES(0.017)RS(0.972)T(0.011)EPELIQVK;TES(0.002)RS(0.969)T(0.029)EPELIQVK 252.7 3.6041e-70 181932600.0 28554.6 27926.6 29862.5 30419.4 34474.4 31516.8 32335.2 32920.3 31881.7 32459.6 35891.8 True False 31453.441971214488 30280.07259041122 31889.14882780044 32298.337250530123 32053.037074223517 31260.137630161724 33565.73373050037 32263.678791024253 30541.82302059825 30410.095316410025 31477.33613686613 0.9992409089019557 0.961964267203263 1.0130828316965486 1.0260822933076106 1.0182893792172942 0.9930998447340013 1.0663460714894586 1.0249812325521777 0.9702797875843054 0.9660949447622996 1.0 14.942025833204667 -8.756719210695472 24.999558840258505 0.9859654551641991 1.0129375058714454 0.24815305198075666 0.025612893403624642 156.90687585091874 831031.0959990553 0.004593556817154016 0.005123349376265051 1.750978402530011e-09 8.756719210695472 0.026972050707246287 TESS(ph)TEGKEQEEK ddPTM_A549_MK2206_60min_R1 3 TESSTEGKEQEEK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 TES(0.023)S(0.883)T(0.093)EGKEQEEK;T(0.001)ES(0.367)S(0.604)T(0.028)EGKEQEEK;TES(0.025)S(0.961)T(0.014)EGKEQEEK 138.91 1.9514999999999997e-09 67229000.0 20924.6 20430.4 19714.699999999997 20186.0 4904.200000000001 2661.52 3226.17 3917.0 4608.5 27710.2 28206.8 True False 24456.16092264664 21470.2200947061 22510.540907722163 25131.57090618398 4182.7986765544565 2943.1602798260105 3812.3233287791136 4472.246745309403 3564.682108262266 21450.446574430283 21202.27309192335 1.1534688199051073 1.0126376545392588 1.061704130030151 1.1853243657991288 0.19728067167231345 0.13881343132718907 0.17980729293744235 0.2109324187043431 0.16812735562868358 1.0117050413147197 1.0 14.371931323708123 -6.750592829855315 24.99865878189469 0.4756989776084991 1.0938391732152462 0.5349534394892487 0.30525819504640195 180.31108437597732 415570.3388551153 0.05445350014517478 0.11247943747906025 1.7758536414149922e-07 6.750592829855315 0.618140195606747 TESS(ph)TEGKEQEEK ddPTM_A549_PD325901_60min_R1 2 TESSTEGKEQEEK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 TES(0.164)S(0.826)T(0.01)EGKEQEEK;TES(0.002)S(0.996)T(0.002)EGKEQEEK 168.05 3.9689000000000004e-22 117334000.0 15283.7 14744.0 15883.0 15676.7 16754.0 15214.300000000001 16506.8 17153.1 16474.9 16181.800000000001 17964.0 True False 16835.289972734732 15986.528624072509 16960.915892237914 16645.0141546311 15577.25683816227 15090.399785085088 17134.97530686754 16810.96796415336 15782.51724600803 15160.078386396746 15754.541883178405 1.0685991441433327 1.0147250705615125 1.0765730935247055 1.0565216226568592 0.9887470517181189 0.9578444042982652 1.0876212989197145 1.0670553348239806 1.0017757014476882 0.9622671670690479 1.0 13.943480183255847 -2.000000229530062 0.09559525682353832 0.9737407948569287 1.205519602157751 0.21533267161563463 0.039856949098900675 162.2057669128675 1.0722531374364315 0.3070109323848781 4.945174526289778 0.009999994714876403 2.000000229530062 0.23177880730082234 TESSS(ph)VVR ddPTM_A549_PD325901_60min_R1 2 TESSSVVR 8 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 TES(0.104)S(0.104)S(0.792)VVR;TES(0.099)S(0.099)S(0.802)VVR 109.11 0.0016979 17913800.0 3216.8 3708.7 3559.7 3366.6 3804.1 3661.1 3981.8 4237.7 4169.9 3988.8 4625.6 True False 3543.367167917003 4021.2451646837794 3801.282648215027 3574.5472358966545 3536.9131394325573 3631.2852154338366 4133.329577924565 4153.17574908866 3994.6536042178627 3736.9464872671356 4056.680524094301 0.8734646829770011 0.9912649371326985 0.9370426449994373 0.8811507868726517 0.8718737200095915 0.8951370939530816 1.0188945255548258 1.02378674495594 0.9847099322936488 0.9211833332873681 1.0 11.986083975065961 -7.758897865617759 24.99913613595342 0.9971956685271731 0.9105060702687185 0.4923874685697499 0.04079684808547343 35.63859513634308 350549.8853787152 0.0054150222538548 0.007828652957089568 1.7422165476944356e-08 7.758897865617759 -0.08668959825845457 TESSTEGKEQEEKS(ph)GEDGEKDTK ddPTM_A549_MK2206_60min_R1 1 TESSTEGKEQEEKSGEDGEKDTK 23 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 T(0.001)ESSTEGKEQEEKS(0.998)GEDGEKDTK 65.155 0.00011546 18392000.0 915.25 1083.8 1093.9 1165.9 1191.8 819.87 1082.5 1293.0 1772.0 1523.2 1294.1 True False 1069.721824285881 1138.9607907159157 1249.031468851024 1451.5455523392393 1016.487798767914 906.6280992143396 1279.176237893041 1476.286709646428 1370.6448293025346 1179.1080620916562 972.7392546569623 1.099700478997447 1.1708798480817675 1.284035226162942 1.492224710157429 1.0449745848144882 0.9320360979305427 1.3150247939198711 1.5176592314731274 1.4090567670016505 1.2121522355006327 1.0 9.92590932836146 -11.01811418290784 1.3515957197732344 1.0022426175279417 1.2689709753484069 0.03838956091855661 0.1846868293822205 0.5434404876132017 1.7921853102857292 0.1289954082002308 0.030248146320667864 9.591484230286633e-12 11.01811418290784 0.2667283578204651 TEST(ph)PITAVK ddPTM_A549_PD325901_60min_R1 2 TESTPITAVK 10 0 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 1 TES(0.083)T(0.901)PIT(0.016)AVK;TES(0.027)T(0.927)PIT(0.046)AVK 145.91 4.1584000000000004e-08 23179000.0 10529.4 10086.4 10559.4 9081.0 12214.099999999999 10854.0 9905.5 10371.8 11708.599999999999 10614.2 11959.8 True False 11598.336936665404 10936.416326223878 11276.024382830501 9641.91274555264 11356.223752357508 10765.608622632224 10282.459222997584 10164.926312480298 11216.528259753299 9944.017600569301 10488.82041941868 1.1057808669497857 1.0426736171377797 1.0750517152485912 0.9192561565552118 1.0826978914933985 1.0263888780764239 0.9803256049613506 0.9691200636499855 1.0693793783510073 0.9480587142248381 1.0 13.356564820024891 -5.26279809572456 1.4699077672491414 1.022719161163031 1.1351822809714078 0.20332718577907904 0.051906307348105925 1.4818467545200025 2.8490121092641596 0.006808954929052949 0.24260761387094634 5.46011643876988e-06 5.26279809572456 0.11246311980837675 TESTYLAEMHRQS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TESTYLAEMHRQSPK 15 1 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 T(0.002)ES(0.012)T(0.064)Y(0.001)LAEMHRQS(0.92)PK;TESTYLAEMHRQS(1)PK 83.948 8.3906e-05 67215000.0 11179.4 11804.4 11505.2 10447.599999999999 16182.3 11899.5 12084.2 11182.3 15813.400000000001 16367.7 15412.4 True False 13066.209409911578 12405.193539331016 13136.810362395832 13007.262469010591 13801.905106563183 13158.697191751173 14279.7427195816 12767.4252693575 12231.690148810778 12670.225202138656 11585.075719399561 1.1278484255421666 1.0707908899169423 1.1339425551097473 1.1227602463771156 1.1913521707459773 1.1358317813768393 1.2325981344834662 1.1020579906938424 1.0558144327298993 1.093667880040005 1.0 13.499979853156177 -8.854207793999981 1.9412742716066178 1.0213127909653223 1.1430275645618824 0.4270834644288246 0.045633123034661036 0.15249216615332767 1.1285379264040278 0.008220352687168253 0.008588812764513227 1.3989178314864231e-09 8.854207793999981 0.12171477359656002 TESTYLAEMHRQS(ph)PK ddPTM_A549_PD325901_60min_R1 4 TESTYLAEMHRQSPK 15 1 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 TESTYLAEMHRQS(1)PK;TESTYLAEMHRQS(1)PK;TESTYLAEMHRQS(1)PK;TES(0.001)T(0.003)Y(0.005)LAEMHRQS(0.991)PK 148.85 3.2937999999999997e-14 237235000.0 23367.9 22623.0 24459.800000000003 25189.100000000002 28693.2 25651.0 25016.300000000003 27092.600000000002 28404.699999999997 28768.7 30123.4 True False 25740.19200546124 24529.51960542542 26119.789116726108 26744.97349840326 26677.888618166256 25442.106760561932 25968.308985944615 26552.216839266475 27210.949239005044 26952.239372302938 26418.41276796574 0.9743277248159703 0.9285008838672268 0.9886963818052789 1.0123611033450692 1.009821780455908 0.963044486586732 0.9829624971804927 1.0050648035699927 1.029999397692821 1.0202066115411939 1.0 14.689256170866509 -5.415089700504819 0.41997569581447597 1.0122175132749527 0.9137723842334895 0.3649916127605407 0.02212683826955055 3.495475412662807 0.4440948971258702 0.005704325799582894 0.16730225842955282 3.845123554903033e-06 5.415089700504819 -0.09844512904146319 TESTYLAEMHRQS(ph)PKEK ddPTM_A549_MK2206_60min_R1 5 TESTYLAEMHRQSPKEK 17 2 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 T(0.001)ES(0.002)T(0.001)Y(0.029)LAEMHRQS(0.967)PKEK;TESTY(0.001)LAEMHRQS(0.998)PKEK;TEST(0.001)Y(0.038)LAEMHRQS(0.961)PKEK;TESTYLAEMHRQS(1)PKEK;TESTYLAEMHRQS(1)PKEK 119.38 2.6358e-10 58465000.0 5780.05 6576.240000000001 6297.38 6470.490000000001 5647.91 5226.08 5078.62 4429.58 8151.700000000001 10439.699999999999 11142.7 True False 6755.581131345106 6910.942526607896 7190.443176993382 8055.760340471336 4817.109920741138 5779.10031680886 6001.339515277922 5057.486530019814 6305.3529655899965 8081.364519313463 8375.660067124749 0.8065729837653507 0.8251221361924648 0.8584927181102473 0.9618060279321687 0.5751319755261733 0.6899874482122753 0.7165213806651183 0.6038313983002872 0.7528186334040822 0.9648630023839645 1.0 13.031987175184717 -10.496759383371097 0.9317975154833994 0.9927067745845309 0.7554232382504003 0.40307279327376044 0.10614462522504645 0.4346778703926169 0.7054725018561147 0.06401292761018486 0.02073031039334843 3.185962184159867e-11 10.496759383371097 -0.23728353633413068 TESTYLAEMHRQS(ph)PKEK ddPTM_A549_PD325901_60min_R1 5 TESTYLAEMHRQSPKEK 17 2 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 T(0.001)ES(0.003)T(0.02)Y(0.005)LAEMHRQS(0.972)PKEK;TESTYLAEMHRQS(1)PKEK;TESTYLAEMHRQS(1)PKEK;TESTYLAEMHRQS(1)PKEK;TESTYLAEMHRQS(1)PKEK 154.84 1.1854e-22 76939000.0 8138.799999999999 8285.199999999999 8918.8 11151.3 10769.500000000002 12945.599999999999 10404.0 10824.0 11678.599999999999 10664.900000000001 12813.8 True False 8965.044984532109 8983.42288091193 9524.083401101261 11840.09047456019 10013.087472758054 12840.175325699991 10799.929913287244 10608.10682873626 11187.789055425486 9991.516393916787 11237.783833370715 0.7977591594091992 0.7993945260128215 0.8475054817142325 1.0535965676258088 0.8910197616565722 1.1425896347615228 0.961037342720256 0.9439678664431485 0.9955511888565814 0.8891002480619778 1.0 13.456069933983288 -6.121730164879075 4.462580459884397 0.9969018258878541 0.8034168818545557 0.5482099001447238 0.06860856261731169 0.09321187833535403 2.961160222771287 0.007550930226411 0.02114362436716553 7.555615260818199e-07 6.121730164879075 -0.1934849440332984 TESVTSGPMSPEGS(ph)PSKSPSK ddPTM_A549_MK2206_60min_R1 2 TESVTSGPMSPEGSPSKSPSK 21 1 P35612 P35612 ADD2 Beta-adducin 1 TESVTSGPMS(0.005)PEGS(0.35)PS(0.297)KS(0.297)PS(0.051)K;TESVTSGPMSPEGS(0.482)PS(0.298)KS(0.218)PS(0.001)K 123.43 1.3063e-15 10886900.0 3053.7 2732.8 3018.0 3009.3999999999996 3852.7000000000003 3378.3 2742.0 3248.5 4640.8 4058.2 3995.0 True False 3569.089904202997 2871.8878472674455 3445.9977813258884 3746.703135097098 3285.972933640831 3735.7894636659544 3240.1859069771062 3708.9848231140118 3589.6662098347674 3141.449801457694 3002.9312436091213 1.1885353391952553 0.9563615062380918 1.1475446827694464 1.2476819584433982 1.0942551350897836 1.2440476190110952 1.0790076908596937 1.2351214604088998 1.1953874127069486 1.046127782027434 1.0 11.552155727376084 -10.827656833369398 1.081029787956027 1.0002423301379901 1.1543951086849016 0.2647359671036833 0.0833270285803767 0.47863353249823726 0.9955130175570831 0.05530760644935456 0.013740760259045992 1.4871102486087926e-11 10.827656833369398 0.15415277854691145 TESVTSGPMSPEGS(ph)PSKSPSKK ddPTM_A549_MK2206_60min_R1 2 TESVTSGPMSPEGSPSKSPSKK 22 2 P35612 P35612 ADD2 Beta-adducin 1 TESVT(0.002)S(0.003)GPMS(0.059)PEGS(0.293)PS(0.293)KS(0.293)PS(0.059)KK;TESVTSGPMS(0.005)PEGS(0.32)PS(0.32)KS(0.32)PS(0.035)KK 84.10700000000001 1.7831e-05 10082600.0 1409.22 1383.49 1416.31 1288.51 2087.42 1823.18 1506.91 1422.62 1930.25 1995.94 2103.91 True False 1647.061883878885 1453.90373163643 1617.16405489386 1604.195007843412 1780.3632831885532 2016.1076974710638 1780.696041241018 1624.2807415910293 1493.0514569758561 1545.0557677594677 1581.4510820379646 1.0414877213630724 0.9193479002605831 1.0225824075505854 1.0143816815226039 1.125778282622727 1.2748467027339039 1.1259886957403027 1.0270825067177363 0.9441022071019796 0.9769861270501042 1.0 10.627033215292776 -8.53557802707367 5.958335146946346 0.9739533419824331 1.0745196692278685 0.2171561821675405 0.08447102010454986 0.20220971854637818 26.35919270462607 0.015918667954632114 0.01837165100212094 2.913546628371086e-09 8.53557802707367 0.10056632724543535 TESVTSGPMSPEGSPS(ph)KSPSK ddPTM_A549_MK2206_60min_R1 2 TESVTSGPMSPEGSPSKSPSK 21 1 P35612 P35612 ADD2 Beta-adducin 1 TESVTSGPMSPEGS(0.022)PS(0.572)KS(0.387)PS(0.019)K;TESVTSGPMSPEGS(0.089)PS(0.514)KS(0.387)PS(0.009)K 103.9 2.7656e-10 9320700.0 2532.06 2994.4 2877.32 2648.5 3876.0 2517.33 3105.9 2941.79 3312.95 3122.4 4119.7 True False 2959.409825076544 3146.8021698835014 3285.367241936583 3297.3826188956837 3305.8455345061507 2783.712189731584 3670.20182657921 3358.7977413540334 2562.5721146940364 2417.047671399019 3096.664792064207 0.9556765177363061 1.016190766901145 1.0609373188715685 1.0648174214225106 1.0675503344688806 0.8989388185848777 1.1852112104561012 1.0846500886894803 0.8275264798634696 0.7805325515351753 1.0 11.59649950719671 -8.7468128987939 24.993915041546853 0.9185541645569469 1.0431854485712198 0.3997644625048917 0.08864148129241647 220.0584182628782 376038.2618097015 0.015114549079444276 0.017102460959193513 1.7913774426837884e-09 8.7468128987939 0.12463128401427281 TESVTSGPMSPEGSPS(ph)KSPSKK ddPTM_A549_MK2206_60min_R1 2 TESVTSGPMSPEGSPSKSPSKK 22 2 P35612 P35612 ADD2 Beta-adducin 1 TESVTSGPMSPEGS(0.086)PS(0.448)KS(0.448)PS(0.017)KK;TESVTSGPMS(0.001)PEGS(0.019)PS(0.481)KS(0.481)PS(0.019)KK 113.6 1.7629e-12 11504400.0 1518.9 1618.68 1538.17 1561.18 2045.77 1476.1399999999999 1605.3 1389.46 2263.96 2174.5299999999997 2099.87 True False 1775.2531864603377 1701.0638980587178 1756.3056352889478 1943.669170084033 1744.8399430151312 1632.3441550175705 1896.9622306602278 1586.4202100427876 1751.1766748012235 1683.3021627233252 1578.414325536293 1.1247067121347656 1.07770429508789 1.1127025438597773 1.2314061895146817 1.1054384864520868 1.0341670932712512 1.2018151381233204 1.0050721058323988 1.1094531052271281 1.0664513971332557 1.0 10.624260239656762 -12.248100315610136 0.24894410258964814 0.8495839047784032 1.1297619300182573 0.1815686514984639 0.06303538746114305 9.892677627831224 0.4118116639126147 0.8793507853763284 0.03566870119499356 5.648064977858037e-13 12.248100315610136 0.28017802523985413 TESVTSGPMSPEGSPS(ph)KSPSKK ddPTM_A549_PD325901_60min_R1 1 TESVTSGPMSPEGSPSKSPSKK 22 2 P35612 P35612 ADD2 Beta-adducin 1 TESVTSGPMS(0.003)PEGS(0.176)PS(0.477)KS(0.338)PS(0.007)KK 152.41 4.7539e-28 16704000.0 2590.6 2988.4 2099.4 2614.5 2540.2 2347.1 2707.0 3125.4 2434.9 3065.6 2622.8 True False 2853.5958049010765 3240.2429557907117 2241.8779087177663 2775.991727039684 2361.7851152142644 2327.9859957785243 2810.0163663272383 3063.061445171132 2332.5696205928375 2872.0374928214314 2300.212227299062 1.2405793565630265 1.4086713031672933 0.9746395928649626 1.206841566223343 1.0267683508436534 1.012074437371405 1.221633522758374 1.331642971382609 1.0140671338538922 1.2485967419596817 1.0 11.16755126111294 -2.000000000000397 0.1258922812174182 0.938780860263451 2.004309763305751 0.0 0.15241818019103523 76.80715682765248 0.6336152699371221 0.41310287933073153 14.551699912735769 0.009999999999990858 2.000000000000397 1.0655289030423 TESVTSGPMSPEGSPSKS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 TESVTSGPMSPEGSPSKSPSK 21 1 P35612 P35612 ADD2 Beta-adducin 1 TESVTSGPMSPEGS(0.001)PS(0.029)KS(0.931)PS(0.039)K;TESVTSGPMSPEGS(0.015)PS(0.237)KS(0.724)PS(0.024)K 95.13799999999999 3.1690000000000004e-07 12148600.0 1676.6799999999998 1579.15 1405.92 1562.83 2040.29 1818.38 1139.68 1640.37 2207.6 2509.6 1615.45 True False 1959.6625931096962 1659.5219899049994 1605.3005966606022 1945.7234201581055 1740.16604375582 2010.7997646570443 1346.745103743131 1872.8974709224372 1707.582124812798 1942.6796170071036 1214.2891808481497 1.6138351753582474 1.3666612665904394 1.3220084819823077 1.6023558892281884 1.433073827224878 1.655948019937518 1.1090810368601525 1.5423817493080738 1.406240088230133 1.5998492349657534 1.0 10.245896322478007 -10.719602483389727 0.45093728962066715 0.8813927055331041 1.46882638029531 0.0 0.23229665754007622 1.0026988537183077 0.2642797602232363 0.2684609730037541 0.03747981558529933 1.9072056147487498e-11 10.719602483389727 0.587433674762206 TESVTSGPMSPEGSPSKS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 TESVTSGPMSPEGSPSKSPSK 21 1 P35612 P35612 ADD2 Beta-adducin 1 TESVTSGPMS(0.001)PEGS(0.216)PS(0.17)KS(0.402)PS(0.211)K;TESVTS(0.001)GPMS(0.009)PEGS(0.045)PS(0.051)KS(0.879)PS(0.015)K 96.31700000000001 2.4357e-07 40430000.0 4660.9 5288.4 5412.3 4481.0 6220.200000000001 5305.9 5320.0 6094.2 5116.0 5803.5 6005.8 True False 5134.071136826772 5734.072027641411 5779.61122480383 4757.78119291062 5783.314610525062 5262.690509565541 5522.455511215705 5972.646400192586 4900.9923113692375 5437.066019568493 5267.124673902964 0.974738866969405 1.0886531803684147 1.0972991114943764 0.9032976220373159 1.0980022248532801 0.9991581432732374 1.0484763230644283 1.133948172858955 0.9304872420529927 1.0322645382797826 1.0 12.362799893440606 -8.794026048660495 24.99266427930897 0.967174532700091 1.042187024586951 0.09958743215684707 0.06682587248369191 205.06303509032622 157274.24318643135 0.010869458970405137 0.01157181621735121 1.6068448727603567e-09 8.794026048660495 0.07501249188685988 TESVTSGPMSPEGSPSKS(ph)PSKK ddPTM_A549_PD325901_60min_R1 1 TESVTSGPMSPEGSPSKSPSKK 22 2 P35612 P35612 ADD2 Beta-adducin 1 TESVTSGPMSPEGS(0.234)PS(0.146)KS(0.584)PS(0.037)KK 148.26 1.7202e-27 18731000.0 1636.8 2222.7 2073.0 2159.9 2740.5 2143.7 1977.7 2209.1 1985.0 2325.4 2030.8 True False 1802.966731051525 2410.0147295663273 2213.6862459616686 2293.3121175111933 2548.016734211751 2126.2424179414697 2052.962455738965 2165.037767494575 1901.5773530234442 2178.5738471447544 1781.0244743018661 1.01232001977865 1.3531620504603203 1.2429285941336652 1.2876364983193933 1.430646670484713 1.193831105984618 1.1526862686958272 1.2156137092631678 1.0676873790680685 1.2232138741376484 1.0 10.798491626318535 -8.654060251269689 0.9088902892731692 1.0173338170617285 1.2645856377928824 0.14335288579448724 0.11903071251677821 0.28670416115703795 0.4729959784403496 0.022024514714684012 0.0241931329479949 2.2178887026039597e-09 8.654060251269689 0.24725182073115382 TET(ph)PIVSK ddPTM_A549_MK2206_60min_R1 1 TETPIVSK 8 0 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 T(0.251)ET(0.749)PIVS(0.001)K 75.197 0.0051758 14794000.0 5683.5 6028.0 5427.6 5264.3 8058.1 5419.7 6326.7 6752.3 9102.7 8932.1 8746.8 True False 6642.735851765972 6334.799452330265 6197.315294209541 6554.053736323405 6872.764164500523 5993.2090566943 7476.179495868726 7709.459203051483 7040.95298402494 6914.332406387135 6574.728160600816 1.0103438027404226 0.9635074329447826 0.9425964302748014 0.9968554708616999 1.0453305439585614 0.9115523730104492 1.1371085333489335 1.1725898036744036 1.0709116501907994 1.0516529714219067 1.0 12.682715530479864 -7.754471235703904 24.999840880145264 1.0540476030452721 0.9799476506745272 0.4249596758220421 0.05720036731142773 189.45909209759552 679724.9143012 0.01011144098665924 0.014811630588769992 1.7600652330029816e-08 7.754471235703904 -0.07409995237074496 TET(ph)PPPLASLNVSK ddPTM_A549_MK2206_60min_R1 2 TETPPPLASLNVSK 14 0 K7ELG9;Q3MHD2;Q3MHD2-2 K7ELG9 LSM12 Protein LSM12 homolog 1 TET(1)PPPLASLNVSK;T(0.009)ET(0.991)PPPLASLNVSK 185.32 4.5439e-26 25124000.0 9632.7 9602.4 8467.2 8463.0 11043.5 9959.3 8413.3 9263.099999999999 13212.9 11014.8 11234.3 True False 11258.46426309599 10091.12114483347 9667.976280332196 10536.435379918505 9419.015779235988 11013.186515551697 9941.887706480848 10576.172792054003 10220.199246665616 8526.549029889167 8444.513259093357 1.3332283244356882 1.1949914500953607 1.1448825981676765 1.2477256008299222 1.115400673815421 1.3041825120817117 1.1773192132506942 1.2524313086565644 1.210276890223381 1.0097146831651276 1.0 13.043798553286175 -10.551651722894885 0.6786382073266947 0.9859209821889016 1.2190216715966302 0.644301001849805 0.06142364376597615 0.3977350287001242 0.3004154926285627 0.05207790275277571 0.011725933386881358 2.8076843232020124e-11 10.551651722894885 0.23310068940772866 TET(ph)PPPLASLNVSK ddPTM_A549_PD325901_60min_R1 4 TETPPPLASLNVSK 14 0 K7ELG9;Q3MHD2;Q3MHD2-2 K7ELG9 LSM12 Protein LSM12 homolog 1 T(0.011)ET(0.989)PPPLASLNVSK;T(0.006)ET(0.994)PPPLASLNVSK;T(0.019)ET(0.974)PPPLAS(0.005)LNVS(0.002)K;T(0.025)ET(0.975)PPPLASLNVSK 133.16 7.5111e-09 36558100.0 19244.600000000002 18921.199999999997 18880.699999999997 19551.3 21751.5 19015.0 18625.600000000002 18816.0 21112.4 20748.399999999998 20397.899999999998 True False 21198.297624874267 20515.755927957172 20162.057840872396 20758.93939677604 20223.749678601318 18860.148144403156 19334.4074003194 18440.700119133544 20225.119248348678 19438.3424830559 17889.087612941712 1.184984840117756 1.1468307591671258 1.127059036050912 1.1604247151072231 1.1305076097883613 1.0542822838409567 1.0807933763112705 1.030835139171255 1.1305841687374254 1.0866033474503973 1.0 14.126792187853136 -14.999999999999998 0.06848101358186538 0.6200227930260007 1.266545309916277 0.4758497854860817 0.03964741162765217 115.13939495579535 0.5909542980679415 7.236508960777849 1.0164872237168283 1.000000000000004e-15 14.999999999999998 0.6465225168902762 TET(ph)QEKNPLPSK ddPTM_A549_MK2206_60min_R1 2 TETQEKNPLPSK 12 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 T(0.03)ET(0.97)QEKNPLPSK;T(0.129)ET(0.871)QEKNPLPSK 77.222 0.00043182 23769000.0 5161.8 6604.5 5688.1 6245.0 8354.2 6522.1 5644.8 6923.9 7634.5 7708.5 7591.700000000001 True False 6032.9856461063755 6940.640839899678 6494.758111318686 7775.025280348699 7125.30824674182 7212.2642929804115 6670.387092525295 7905.384028554444 5905.297939791312 5967.144496214243 5706.471369739019 1.057218244903293 1.2162754161363825 1.1381390863993275 1.3624926467832754 1.248636466403176 1.2638746128170373 1.168916246193374 1.38533666715233 1.0348422969589677 1.0456802653663617 1.0 12.478383206958071 -8.882462897541679 8.655745372056547 1.0153663745727235 1.2305410626119093 0.5098564270908448 0.08872755009515658 0.1313965660057821 9.45602609509034 0.014593434002750764 0.01551058384959676 1.310802021454036e-09 8.882462897541679 0.21517468803918582 TET(ph)QEKNPLPSKETIEQEK ddPTM_A549_MK2206_60min_R1 2 TETQEKNPLPSKETIEQEK 19 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 T(0.003)ET(0.997)QEKNPLPSKETIEQEK;T(0.001)ET(0.999)QEKNPLPSKETIEQEK 243.35 8.694099999999999e-86 100466000.0 16160.7 18704.1 17081.6 17987.0 19349.7 17723.7 14411.3 17757.2 19382.8 22600.0 17756.6 True False 18888.23106881926 19656.058798329545 19504.0277340942 22393.815807467112 16503.384762392598 19599.210169960123 17029.646667111294 20274.337479144266 14992.626747971317 17494.644303618334 13347.146162770903 1.4151512869098613 1.4726787703244042 1.4612882406650076 1.6777980501876886 1.2364729179654426 1.4684195356029033 1.2759017140766737 1.5190016825990358 1.1232833270223819 1.3107404452058835 1.0 13.70424368273939 -8.866226980908728 4.300157657839659 1.0525976947378357 1.4389828989465778 0.45047936627912244 0.13676545091922282 0.08372513283776958 2.688725993630964 0.01978211893283249 0.02091908369493497 1.3607333190383887e-09 8.866226980908728 0.3863852042087421 TET(ph)QEKNPLPSKETIEQEK ddPTM_A549_PD325901_60min_R1 4 TETQEKNPLPSKETIEQEK 19 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 TET(1)QEKNPLPSKETIEQEK;T(0.003)ET(0.997)QEKNPLPSKETIEQEK;T(0.014)ET(0.986)QEKNPLPSKETIEQEK;T(0.125)ET(0.875)QEKNPLPSKETIEQEK 235.25 2.3535999999999997e-85 180812000.0 30036.300000000003 25868.199999999997 29641.300000000003 24191.3 32859.4 28970.4 40373.4 33646.7 35490.3 37702.200000000004 38876.1 True False 33085.563064444614 28048.203998455807 31652.936865616797 25685.541658571463 30551.469102776016 28734.4746675055 41909.831830172174 32975.59017317449 33998.76611184278 35321.67665770228 34094.58615590249 0.9704051814313284 0.8226585848615755 0.9283860118107639 0.7533612973367841 0.8960797753366164 0.8427870200891397 1.2292224823769182 0.9671796578608923 0.9971895818408951 1.0359907727340856 1.0 15.057255052930525 TET(ph)QEKNPLPSKETIEQEKQAGES ddPTM_A549_PD325901_60min_R1 2 TETQEKNPLPSKETIEQEKQAGES 24 3 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 T(0.169)ET(0.831)QEKNPLPSKETIEQEKQAGES;T(0.121)ET(0.879)QEKNPLPSKETIEQEKQAGES 127.23 8.877700000000001e-23 28837000.0 3778.6 3667.3999999999996 4490.9 4669.4 5300.3 5875.799999999999 7217.7 7085.5 6525.5 6530.200000000001 5461.7 True False 4162.2006903417005 3976.464668741421 4795.679479975523 4957.81823302318 4928.025213042343 5827.949432915278 7492.373523176983 6944.174144032778 6251.2559280375235 6117.882057549093 4789.945524568887 0.8689453082488479 0.8301690798663766 1.0011970815486784 1.0350468930373489 1.0288269851431942 1.2167047418435546 1.564187626925324 1.4497396908616784 1.305078710388916 1.2772341618853222 1.0 12.225793533132682 -6.5714675449407745 1.2936162437921066 1.2079100875859037 0.871820525391466 0.5210150172976448 0.1560755092650361 0.42639050062520895 1.3785775804486056 0.03061364984079334 0.09979060845270737 2.682455061421759e-07 6.5714675449407745 -0.33608956219443764 TETDLS(ph)FK ddPTM_A549_PD325901_60min_R1 2 TETDLSFK 8 0 P12931;P12931-2 P12931 SRC Proto-oncogene tyrosine-protein kinase Src 1 TET(0.001)DLS(0.999)FK;TET(0.005)DLS(0.995)FK 96.89 0.0024735 9743500.0 4917.8 4468.3 4823.1 4535.1 6006.0 4366.700000000001 4571.1 4860.4 5322.4 5358.700000000001 5182.9 True False 5417.051435706988 4844.859322500212 5150.4245696564 4815.22282704061 5584.159279575176 4331.139042974772 4745.0557119018995 4763.455509089961 5098.718037144571 5020.350767478538 4545.4361571100735 1.1917561370284597 1.0658733628722898 1.13309798919956 1.0593533074947121 1.228520011405354 0.952854444165915 1.0439164797155003 1.0479644514726836 1.121722506028171 1.104481636954815 1.0 12.150203019457566 -7.26304802646439 24.998562862962874 1.0503560886309096 1.1274515013920843 0.33747737168933134 0.062466928082401625 165.011921847611 2564306.9930007597 0.009720724531677806 0.016069735011694113 5.456975117836816e-08 7.26304802646439 0.07709541276117471 TETDS(ph)VGTPQSNGGMR ddPTM_A549_MK2206_60min_R1 1 TETDSVGTPQSNGGMR 16 0 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 T(0.001)ET(0.032)DS(0.948)VGT(0.019)PQSNGGMR 75.316 0.00018036 8765700.0 1483.7 1363.9 994.3 1106.9 1667.0 1171.5 946.5 1183.9 1516.8 2249.4 2275.4 True False 1734.1122870177117 1433.3166843120853 1135.306691177049 1378.0905496906291 1421.7865082615476 1295.4673524212367 1118.4667983055547 1351.7214505416896 1173.2472218318762 1741.2589777238513 1710.355382154744 1.0138900401114523 0.8380227286485694 0.6637840901501794 0.805733454034845 0.8312813366718846 0.7574258343837162 0.6539382458027437 0.7903161323342993 0.6859669248117273 1.0180685230049527 1.0 10.740080407903472 -10.919962853461906 1.165288734918415 1.0004481558904883 0.7706002785934395 0.44364129675701647 0.09659715748338016 0.37347657345194585 0.8980358614530233 0.06902702198231003 0.016188342901066168 1.2023672723772448e-11 10.919962853461906 -0.2298478772970488 TETDS(ph)VGTPQSNGGMR ddPTM_A549_PD325901_60min_R1 3 TETDSVGTPQSNGGMR 16 0 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 T(0.001)ET(0.02)DS(0.953)VGT(0.025)PQSNGGMR;T(0.005)ET(0.022)DS(0.925)VGT(0.046)PQS(0.002)NGGMR;TET(0.003)DS(0.997)VGTPQSNGGMR 131.96 3.9100000000000005e-10 27551900.0 3994.2999999999997 4361.1 4076.8 4437.2 4421.8 4482.6 4198.37 4232.5 4319.4 4562.3 4854.7 True False 4399.798395551753 4728.625202281781 4353.476163789934 4711.275766387638 4111.228022381873 4446.0951918012925 4358.141267786217 4148.079467167981 4137.870639118115 4274.23559939301 4257.602676478862 1.033398071609277 1.1106309258036415 1.022518185607296 1.1065559950943977 0.965620405373748 1.0442719834717686 1.0236138970559139 0.9742758501360538 0.9718780622667759 1.003906640468364 1.0 12.055825607064012 -7.112396330256742 0.8051299620716512 0.986537383367888 1.0702058534839851 0.38101149745741514 0.037050043782135195 0.4166297979922868 0.5185950542823716 0.006075354785647559 0.01753613077999178 7.719757706977613e-08 7.112396330256742 0.08366847011609713 TETDSVGT(ph)PQSNGGMR ddPTM_A549_MK2206_60min_R1 2 TETDSVGTPQSNGGMR 16 0 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 TETDS(0.005)VGT(0.995)PQSNGGMR;TET(0.001)DS(0.011)VGT(0.988)PQSNGGMR 102.28 1.218e-06 7109900.0 1431.3400000000001 1778.22 1371.49 1284.0900000000001 2315.7 1823.1399999999999 1287.71 2013.6399999999999 2496.9 1946.9299999999998 2422.8 True False 1672.9151990968069 1868.7238026082816 1565.9879049405724 1598.6921076449905 1975.0635975892417 2016.0634646976123 1521.6702386117756 2299.07963651387 1931.3561367299671 1507.1171607983895 1821.1518941216978 0.9186027834891926 1.0261218784880801 0.859888683637679 0.8778466600206378 1.0845133807697969 1.1070265315073657 0.8355537193374221 1.2624315653926639 1.0605134821340196 0.8275625803992805 1.0 10.830635540726012 -6.762338245564422 24.99982362535873 1.0415928875595244 0.9238136089097101 0.13857790974254514 0.12133201423828892 26.787102904256322 745056.0816019168 0.014113237854647949 0.027813578927537174 1.7284696349443135e-07 6.762338245564422 -0.1177792786498143 TETDSVGT(ph)PQSNGGMR ddPTM_A549_PD325901_60min_R1 3 TETDSVGTPQSNGGMR 16 0 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 TET(0.001)DS(0.039)VGT(0.787)PQS(0.172)NGGMR;T(0.001)ET(0.004)DS(0.015)VGT(0.778)PQS(0.202)NGGMR;TETDS(0.004)VGT(0.968)PQS(0.027)NGGMR 112.96 2.759e-07 37896400.0 2484.67 2111.04 2032.6 1972.08 2576.6400000000003 2220.5299999999997 1743.19 2316.8599999999997 2238.3599999999997 2204.8599999999997 2449.3 True False 2736.9118692826205 2288.944749495525 2170.544459016734 2093.8909026813626 2395.6656953254405 2202.4467398943752 1809.5280493601686 2270.648409758492 2144.289513306577 2065.644763316239 2148.0516273919447 1.2741369129035507 1.0655911246763865 1.0104712714247464 0.9747861159294661 1.1152737973221512 1.0253230005316372 0.8424043567133466 1.0570734803592212 0.9982485923348429 0.9616364602112659 1.0 11.068812952886367 -5.202932241313194 1.9754664423772834 1.0006474351211023 1.3837378296399547 0.6121590755221451 0.06342617763908633 0.42856225026846934 1.5500210340409326 0.008198096884299148 0.3118393468642595 6.2671163668358445e-06 5.202932241313194 0.3830903945188524 TETDSVGTPQS(ph)NGGMR ddPTM_A549_MK2206_60min_R1 2 TETDSVGTPQSNGGMR 16 0 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 TETDS(0.001)VGT(0.018)PQS(0.98)NGGMR;TETDS(0.001)VGT(0.063)PQS(0.935)NGGMR 60.434 0.0014918 21790000.0 1063.73 898.83 1106.9 697.8800000000001 505.24 736.9300000000001 672.78 737.55 1034.12 1124.73 1082.55 True False 1243.26161829841 944.5766077866649 1263.875064330559 868.8606313290242 430.91986528738096 814.9114434654559 795.0154173946233 842.0999711521442 799.8934711503031 870.6527118410899 813.7229581399384 1.527868429742156 1.1608085999513156 1.5532006952582584 1.0677597610311045 0.5295658196401463 1.0014605527761367 0.9770099386306145 1.0348730642638766 0.9830046739479396 1.069962083694044 1.0 9.66839388482025 -6.417341790154934 5.935683777603337 0.9622961167418186 1.384257512280601 0.5993524758591139 0.1673394767332495 0.1212578767013465 5.773116787325086 0.021902484283827715 0.05136378653859666 3.8252357841735645e-07 6.417341790154934 0.4219613955387823 TETEPIPENT(ph)PTK ddPTM_A549_MK2206_60min_R1 2 TETEPIPENTPTK 13 0 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 T(0.001)ET(0.001)EPIPENT(0.895)PT(0.103)K;TETEPIPENT(0.995)PT(0.005)K 83.499 0.00047599 8379200.0 1933.8400000000001 2492.63 2073.94 1437.25 2963.9700000000003 2058.41 1830.45 2061.68 2692.93 1960.24 2569.8 True False 2260.2249141513325 2619.4942201164563 2368.0558776020594 1789.3763145206049 2527.9739393473164 2276.229579938026 2163.0190712714243 2353.9294536301977 2082.98565472555 1517.4204225541944 1931.6477371280916 1.170102017416363 1.3560931270061856 1.2259253237978083 0.9263471181246478 1.308713742551125 1.1783875166194882 1.1197792587624325 1.2186121767367069 1.07834654046315 0.78555752862592 1.0 10.915616307285582 -9.141397192843417 0.18209432314355045 0.9061872575213308 1.2888376256377865 0.4163876745313356 0.12264218415251375 2.9145526521123197 0.384355687236014 0.40508740515592967 0.2831244268325953 7.221090819756385e-10 9.141397192843417 0.3826503681164557 TETQEKNPLPSK ddPTM_A549_MK2206_60min_R1 1 TETQEKNPLPSK 12 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 85.45700000000001 0.00039873 5383300.0 2375.5 2630.0 3482.4 2902.9 3359.3 2452.8 2687.4 2545.1 3096.9 3742.8 3514.7 False True 2776.4263246010496 2763.855766361744 3976.2566844563557 3614.110630316134 2865.1514200378015 2712.353667963133 3175.6657937309537 2905.875719041859 2395.457094733081 2897.2988805125074 2641.902989214765 1.050919104878362 1.0461609595980002 1.505072934429811 1.3679952084048066 1.0845028874013996 1.0266666410674328 1.202037246142348 1.099917646826825 0.9067165238512661 1.0966711844985844 1.0 11.367361776398852 -8.105416237734817 0.9430949359275899 0.9565182432212449 1.2172409425805037 0.19477790923033966 0.14748348985295104 0.4287860117780311 0.7570789782855517 0.029955685338841645 0.04315196683778217 7.844834074053083e-09 8.105416237734817 0.26072269935925885 TETQEKNPLPSKETIEQEK ddPTM_A549_MK2206_60min_R1 2 TETQEKNPLPSKETIEQEK 19 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ; 185.27 6.1828e-44 38769000.0 9865.8 10333.0 10127.8 9594.2 10158.400000000001 8730.6 9942.1 8394.7 11467.0 13036.2 10602.599999999999 False True 11530.90584434815 10858.905564188559 11564.074330587262 11944.779430700002 8664.11281675111 9654.466297096757 11748.450877373116 9584.674432690532 8869.742809036206 10091.313365965889 7969.681803126427 1.4468464524925813 1.3625268652418114 1.4510082856822202 1.4987774575911152 1.0871340952849917 1.2113992171317811 1.4741430294951443 1.2026420463776306 1.1129356263077772 1.2662128319862365 1.0 12.96030640910172 -8.241231187647362 0.3007276082466288 0.9645056055125729 1.4823856043273667 0.2947648304275621 0.139545691446923 0.7282096875139772 0.19107008965320646 0.09366471789057661 0.13359327970773738 5.7381092456330835e-09 8.241231187647362 0.5178799988147937 TETQEKNPLPSKETIEQEK ddPTM_A549_PD325901_60min_R1 2 TETQEKNPLPSKETIEQEK 19 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ; 212.1 1.1444999999999998e-66 73797000.0 17170.2 14691.400000000001 17639.4 18003.699999999997 19153.6 19495.0 19552.1 17784.5 18420.1 19101.1 17603.9 False True 18913.30606396684 15929.49583747278 18836.515758329107 19115.747659630662 17808.317212332862 19336.23918354666 20296.165864819646 17429.774195829643 17645.96725462324 17895.05328618589 15438.731900316434 1.2250556707691251 1.031787839851425 1.2200817968697955 1.2381682500256943 1.1534831569921788 1.2524499621079852 1.314626485897048 1.1289641084752822 1.1429673996904866 1.159101239773398 1.0 13.91426663757919 -9.906163015520095 0.6896190976058176 1.008166792731347 1.1959771236305403 0.1496683412136388 0.08280975915908333 0.40761559805368813 0.39712120613686724 0.036180202896398596 0.015970553273722196 1.2411863320340476e-10 9.906163015520095 0.1878103308991934 TETQEKNPLPSKETIEQEKQAGES ddPTM_A549_PD325901_60min_R1 1 TETQEKNPLPSKETIEQEKQAGES 24 3 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 52.707 0.0035472 5400600.0 2101.4 2325.7 2517.5 2756.0 2882.7 3461.2 2947.4 3562.8 3424.4 3032.1 3459.9 False True 2314.7325810310817 2521.6949010448584 2688.3526889573095 2926.2318606698677 2680.2290967751196 3433.0131347572037 3059.5649198791643 3491.737159037468 3280.4843766717795 2840.652688538578 3034.354234113169 0.7628419104823447 0.8310482911636248 0.885971933907386 0.9643672540839975 0.8832947276369837 1.1313817932534658 1.0083084188004714 1.1507348482198472 1.0811145052846955 0.9361638323578253 1.0 11.567173802009336 -6.237897585063874 0.8164637178565068 1.0501650476634132 0.759152357945681 0.6491528421029571 0.06946536577738162 0.37852219228899947 0.3728485366470541 0.01027810309452865 0.07346213433459199 5.782323895737627e-07 6.237897585063874 -0.2910126897177322 TETTMS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 TETTMSPPR 9 0 O15015-1;O15015 O15015-1 ZNF646 Zinc finger protein 646 1 T(0.002)ET(0.003)T(0.015)MS(0.98)PPR 52.403 0.008526 4288100.0 663.22 892.6 879.92 550.34 870.63 703.66 616.11 502.74 1284.1 936.37 1008.2 True False 775.1553218277869 938.0295273971462 1004.705887257878 685.1733247057016 742.5614803165871 778.120834148295 728.049211942985 574.0049345766781 993.2534002863347 724.8433666627911 757.8361150955493 1.022853498780609 1.2377735881310932 1.3257561460121268 0.9041180686134412 0.9798444090025502 1.026766630210264 0.9606947959338034 0.7574262075175799 1.3106440568104933 0.9564645339862189 1.0 9.565742083682748 -4.9372315261464355 18.182743131805868 1.0967267761034871 6.747050027493392e-05 0.0 0.1748824081960551 120.7987034561807 171655.07941264295 0.025465436288475484 20201.761307138866 1.1554960730086157e-05 4.9372315261464355 -1.0966593056032121 TETTMS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 TETTMSPPR 9 0 O15015-1;O15015 O15015-1 ZNF646 Zinc finger protein 646 1 T(0.112)ET(0.149)T(0.119)MS(0.621)PPR 43.77 0.022813999999999997 5466500.0 1255.0 1625.8 1542.1 1656.6 1749.8 1653.4 1443.4 1664.9 1846.9 1634.7 1920.7 True False 1382.4066761178299 1762.8118717455957 1646.7561794006217 1758.9244195884257 1626.900084482293 1639.935258583023 1498.329376858786 1631.6922634112177 1769.281215767756 1531.4847630203521 1684.466076320461 0.8206794399431017 1.0465107588252966 0.9776131455243001 1.0442029342796924 0.9658253777577315 0.9735638382016508 0.8894981014587892 0.9686703023283662 1.0503513490948804 0.9091811254315786 1.0 10.718075658792843 -8.712379783075301 10.314817339980086 1.0237667229369642 0.9651819254385635 0.0 0.07013352952877344 0.6098170354707809 124.74459575543017 0.009977701419346145 0.011304408676408471 1.939189348084457e-09 8.712379783075301 -0.05858479749840073 TETVEEPMEEEEAAKEEKEES(ph)DDEAAVEEEEEEK ddPTM_A549_MK2206_60min_R1 2 TETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEK 34 2 P14625 P14625 HSP90B1 Endoplasmin 1 TETVEEPMEEEEAAKEEKEES(1)DDEAAVEEEEEEK;T(0.005)ET(0.026)VEEPMEEEEAAKEEKEES(0.969)DDEAAVEEEEEEK 87.34700000000001 1.7394e-09 16423000.0 599.24 565.64 583.89 765.6 1286.06 905.27 1040.02 951.75 1119.8899999999999 847.71 1082.79 True False 700.3770619886051 594.4286599562198 666.6943818881291 953.1720343690902 1096.8822776333798 1001.0650705304079 1228.9781717630672 1086.6634771121323 866.2367030968483 656.2117222398358 813.9033595162757 0.8605162440966673 0.7303430474958409 0.8191321169682396 1.1711120530766521 1.347681226288691 1.2299556929281719 1.5099804631516467 1.335125926692286 1.0642992106724753 0.8062526276213429 1.0 9.668713693082447 -6.239980030494092 8.196888368193244 1.131478744982471 0.7951603313711345 0.43591251445019763 0.18570203025917514 0.20680429133950282 68.04429556326549 0.027534416701946247 0.0714994314389136 5.754663975292703e-07 6.239980030494092 -0.3363184136113365 TETVEEPMEEEEAAKEEKEES(ph)DDEAAVEEEEEEK ddPTM_A549_PD325901_60min_R1 1 TETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEK 34 2 P14625 P14625 HSP90B1 Endoplasmin 1 TETVEEPMEEEEAAKEEKEES(1)DDEAAVEEEEEEK 101.6 2.4719e-14 17177000.0 703.58 809.19 619.99 505.71 668.2 481.72 629.31 480.01 654.84 612.73 465.21 True False 775.0069236517792 877.383281152552 662.0662497027374 536.9465581492593 621.2679371648576 477.7970320337571 653.2587364216452 470.4358239894396 627.3193520674417 574.0421232308437 407.99211920916457 1.8995634649856012 2.150490756667644 1.6227427406834718 1.3160709064431313 1.5227449450962391 1.17109377739918 1.6011552813517465 1.1530512523166216 1.5375771308607926 1.406993165317859 1.0 8.672397475089968 -2.0000000000000004 0.2093659326685181 1.1459178814704343 5.608426658007058 0.5658783829337599 0.21115671960851698 25.411037222209302 0.2886716963304304 0.16168267269917502 38.23569141611554 0.00999999999999999 2.0000000000000004 4.462508776536624 TEVALAKDMES(ph)PTKLDVTLAK ddPTM_A549_MK2206_60min_R1 2 TEVALAKDMESPTKLDVTLAK 21 2 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 T(0.001)EVALAKDMES(0.499)PT(0.499)KLDVTLAK;T(0.014)EVALAKDMES(0.895)PT(0.091)KLDVTLAK 82.84899999999999 3.7288e-05 22609000.0 4202.2 5529.799999999999 6111.8 4799.6 4982.4 4271.1 4325.3 3659.3 5782.6 6309.200000000001 6387.700000000001 True False 4911.42862607389 5811.243200314519 6978.545142447837 5975.502215462235 4249.4955601453685 4723.064967073279 5111.151022409944 4178.016981136248 4472.850332914692 4883.947338070297 4801.457798448558 1.0229036330717862 1.2103080864716216 1.4534221553926263 1.2445183247040166 0.8850427804485673 0.9836731187347708 1.0644998325428277 0.8701559310770669 0.9315608968509429 1.0171801030196272 1.0 12.229256782013369 -6.751246927029194 24.96769684499544 0.963395000993018 1.2469420033196292 0.5934318592431159 0.1065523107661185 102.45816232864718 250982.30241015466 0.014861454884478141 0.030661144270647197 1.7731810158150794e-07 6.751246927029194 0.28354700232661123 TEVALAKDMES(ph)PTKLDVTLAK ddPTM_A549_PD325901_60min_R1 2 TEVALAKDMESPTKLDVTLAK 21 2 E7EVA0;P27816;P27816-6;P27816-2;P27816-5;H7C456 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TEVALAKDMES(0.978)PT(0.021)KLDVTLAK;T(0.006)EVALAKDMES(0.946)PT(0.048)KLDVTLAK 118.67 4.1371e-15 45626000.0 6099.4 6593.6 8094.400000000001 7665.2 8440.400000000001 10446.4 9497.0 9808.0 8534.6 7756.6 8202.1 True False 6718.606597859036 7149.26581224121 8643.734659581345 8138.66199506773 7847.57542179926 10361.327981892877 9858.413531957804 9612.371745772847 8175.920441870977 7266.846952250361 7193.293697395768 0.9340097708357736 0.9938793149554707 1.2016379454533728 1.131423564425601 1.090957182054219 1.4404149778625126 1.3705006283181382 1.336296299044883 1.1366031731515365 1.0102252539585896 1.0 12.812436794248091 -4.359419778702367 15.797967867032648 1.1253109250232378 1.1109942627136944 0.0 0.16346036356733953 0.0 0.0 0.023363937434550792 0.0 4.370994110280691e-05 4.359419778702367 -0.014316662309543426 TEVLS(ph)PNSK ddPTM_A549_MK2206_60min_R1 2 TEVLSPNSK 9 0 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 T(0.009)EVLS(0.983)PNS(0.008)K;TEVLS(0.986)PNS(0.014)K 87.363 0.0011491 22780000.0 15961.7 17318.6 13794.8 13108.2 19050.7 15226.4 14247.2 14286.8 21601.2 22266.0 21887.0 True False 18655.644733902147 18200.042766278526 15751.110070853003 16319.709588449468 16248.3672663097 16837.647541533694 16835.731821256104 16311.99765149001 16708.56269002818 17236.095135591404 16451.853849530133 1.1339539546441422 1.1062609072957648 0.9574063941312521 0.9919678194148048 0.9876313888342593 1.0234498613671175 1.0233334173301651 0.991499061484544 1.015603642169808 1.0476688702218 1.0 14.005962540338539 -5.654762779342228 6.004639996405117 1.0038477735586984 1.1262977860439762 0.7950465966160039 0.022793422203167695 0.04966509172742915 2.4154926533790477 0.002550337804826959 0.010185811611978344 2.2143038780648713e-06 5.654762779342228 0.12245001248527787 TEVLS(ph)PNSK ddPTM_A549_PD325901_60min_R1 1 TEVLSPNSK 9 0 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 T(0.208)EVLS(0.717)PNS(0.075)K 86.11399999999999 0.0012192 9382900.0 5816.9 5530.7 5434.4 6069.7 7264.9 6132.6 5076.4 6089.3 7031.4 6245.6 7095.9 True False 6407.427405824551 5996.7914989933415 5803.211063701927 6444.61158371114 6754.63848654441 6082.658138857052 5269.58517991267 5967.84413453656 6735.894710352159 5851.251750119238 6223.149284616216 1.0296117147091224 0.9636264895360237 0.9325199827758611 1.0355868530492085 1.0854051827491988 0.977424429443391 0.8467714558831522 0.9589749275803527 1.0823932389029236 0.9402396572075944 1.0 12.603429139531475 -8.746529887086883 24.992672170963267 1.0389079214529755 0.9777032470025764 0.0 0.0677687148432934 340.9786580178246 571579.0339999777 0.011454782570339187 0.012962154855570708 1.792545189533371e-09 8.746529887086883 -0.06120467445039912 TEVLS(ph)PNSKVESK ddPTM_A549_MK2206_60min_R1 2 TEVLSPNSKVESK 13 1 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 TEVLS(0.986)PNS(0.014)KVESK;TEVLS(0.936)PNS(0.064)KVESK 115.5 5.1065e-06 25663000.0 5842.1 7367.4 7122.1 7312.2 8716.1 6973.7 5608.2 6778.4 10447.8 10747.3 10547.1 True False 6828.103654368254 7742.36919129031 8132.120874215078 9103.68932825713 7433.973236147851 7711.65230523259 6627.137346283372 7739.258957979382 8081.389981708257 8319.477465675982 7927.963984848502 0.8612682483696644 0.9765898541021514 1.0257514905159446 1.1483010449663507 0.9376900866799168 0.9727153554141624 0.8359192043441166 0.9761975423665189 1.019352509314242 1.0493838621840008 1.0 12.952734693326942 -8.694278645277285 6.91377388753795 1.009107951500609 0.96981740349394 0.08452452972589031 0.07840184375596426 0.5826741497625417 48.80712076425316 0.013508850590076836 0.015285977050179303 2.02172161685235e-09 8.694278645277285 -0.03929054800666898 TEVLS(ph)PNSKVESK ddPTM_A549_PD325901_60min_R1 3 TEVLSPNSKVESK 13 1 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 TEVLS(0.84)PNS(0.159)KVESK;TEVLS(0.842)PNS(0.158)KVESK;TEVLS(0.813)PNS(0.157)KVES(0.03)K 83.41799999999999 0.000127 35397000.0 11239.699999999999 12368.699999999999 10642.5 13280.3 14478.300000000001 14020.9 12744.199999999999 14209.099999999999 12891.0 14719.300000000001 14540.5 True False 12380.746069770188 13411.053756956426 11364.764048551402 14100.593969250378 13461.39415542346 13906.718439014585 13229.18750489383 13925.688353676687 12349.236099660047 13789.92088598855 12752.110679823849 0.9708781848450212 1.0516732557987554 0.891206509564924 1.1057458897027983 1.0556208688434479 1.0905424825881989 1.0374115969542832 1.0920300727713768 0.9684072236919005 1.0813834064196686 1.0 13.638448435676485 -8.793734435902925 24.999922366957115 0.9850811826428744 1.0372509514170474 0.0 0.06507815238581505 270.814111654528 209638.7613373331 0.009880204829786188 0.01051864542933241 1.607924172256446e-09 8.793734435902925 0.05216976877417301 TEVLSPNS(ph)KVESK ddPTM_A549_PD325901_60min_R1 1 TEVLSPNSKVESK 13 1 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2 Q8NEZ4 KMT2C Histone-lysine N-methyltransferase 2C 1 TEVLS(0.431)PNS(0.566)KVES(0.003)K 137.19 3.974e-09 10417000.0 4115.9 3909.9 3905.6 4396.3 5272.3 5061.8 4421.2 4966.6 4712.3 4859.0 4978.1 True False 4533.7431380345615 4239.400994795245 4170.657502280701 4667.849466278278 4901.991836447591 5020.57837903444 4589.451185373473 4867.537266777674 4514.258418464673 4552.201910757873 4365.825258775908 1.0384618873421734 0.9710422986521202 0.9552964800634444 1.0691791791014218 1.1228099032580185 1.149972360653324 1.0512219141496895 1.1149180231144744 1.0339988778502744 1.0426899018936504 1.0 12.09203867258528 -4.848735479844331 18.8486139631165 1.0361848977465382 2.65946017499599 0.0 0.060383661813688504 25078.290707713124 3071503.1672925865 0.008925842983654527 30167.286468769675 1.4166563745373138e-05 4.848735479844331 1.6232752772494516 TEVS(ph)PVPR ddPTM_A549_MK2206_60min_R1 2 TEVSPVPR 8 0 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 TEVS(1)PVPR;TEVS(1)PVPR 94.69200000000001 0.0025285999999999998 394260000.0 4826.6 4841.5 4522.4 4752.9 6758.7 5034.299999999999 4481.5 3696.0 6233.700000000001 6318.3 5872.4 True False 5641.212080959554 5087.911670281518 5163.744322819155 5917.360713365788 5764.50418319575 5567.026284502121 5295.730540524396 4219.919318525288 4821.776903173373 4890.991641750074 4414.121010005062 1.277992168355413 1.1526443563167479 1.1698239153650283 1.3405524451988238 1.3059234602155003 1.2611856974205917 1.1997248214358136 0.9560044477621715 1.0923526772927876 1.1080329765912933 1.0 12.107910465285771 -8.106542853342477 5.0327347840549 1.0385786645151862 1.2484132133432826 0.7097452603889214 0.06359803179259985 0.09594037845581674 3.7218626867360043 0.010663340486039157 0.013890196259606528 7.824509941045445e-09 8.106542853342477 0.20983454882809638 TEVS(ph)PVPR ddPTM_A549_PD325901_60min_R1 2 TEVSPVPR 8 0 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 T(0.001)EVS(0.999)PVPR;T(0.002)EVS(0.998)PVPR 139.78 0.0010937000000000002 426270000.0 6349.799999999999 5742.299999999999 6044.2 6620.8 6536.8 5662.0 6537.200000000001 6196.3 6278.1 6124.299999999999 7070.4 True False 6994.427021524303 6226.223773603604 6454.395758727218 7029.751779072226 6077.677718735771 5615.890549230118 6785.976723293103 6072.709935596684 6014.253289680847 5737.610652820425 6200.785622958395 1.127990459084322 1.0041024076934744 1.0408996780714095 1.1336872787610308 0.9801464021322045 0.905674037244135 1.0943737029333895 0.9793452483041002 0.9699179515919866 0.9253038246600453 1.0 12.598235297345918 -6.792070976888001 24.998647306745198 0.9868564121170483 1.0689315639393764 0.40067500552144153 0.05654462822151363 159.2658313401807 129977.4479220367 0.007289493162046093 0.013776953602583093 1.6140947432422305e-07 6.792070976888001 0.08207515182232805 TEVSETARPS(ph)SPDTR ddPTM_A549_MK2206_60min_R1 1 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 T(0.001)EVS(0.005)ET(0.058)ARPS(0.462)S(0.462)PDT(0.012)R 57.159 0.0090351 6029400.0 241.28 362.79 279.98 214.08 314.6 380.33 323.74 319.08 264.78 602.74 619.74 True False 282.0021652703601 381.2544613986224 319.6853740277078 266.5296096104163 268.3227567480999 420.57626815737825 382.5593674415638 364.3105671415173 204.80775276677497 466.5806153788897 465.84145404613713 0.6053608214146405 0.8184210702744004 0.6862535981953337 0.5721466118900167 0.5759958767463513 0.9028313485294166 0.8212222508726648 0.7820484071935682 0.4396511967492071 1.0015867229640738 1.0 8.863695216798249 -7.22714728895738 24.91677643734744 0.7507354382434827 0.6584086498168188 0.14177344758190336 0.16357958297184585 1841.8770561290746 1338316.1911814513 0.03130300803479694 0.0542166675700382 5.927242708039039e-08 7.22714728895738 -0.09232678842666386 TEVSETARPS(ph)SPDTR ddPTM_A549_PD325901_60min_R1 1 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 TEVS(0.003)ET(0.017)ARPS(0.489)S(0.489)PDT(0.002)R 64.798 0.0032994 8088900.0 473.14 401.91 410.65 586.01 471.96 460.58 596.49 283.15 430.04 452.11 583.06 True False 521.1728244927409 435.7803662032678 438.51917843905403 622.2065067747276 438.8111577736099 456.82918918481215 619.1897533618527 277.50235112312214 411.96691430438386 423.5636974424249 511.3473163218662 1.0192149403296957 0.8522199145149459 0.8575759849359008 1.2167982248352731 0.8581469849690214 0.8933833709557639 1.2108986076541866 0.542688584188147 0.8056499000868372 0.8283287775696742 1.0 8.998159718370543 TEVSETARPSS(ph)PDTR ddPTM_A549_MK2206_60min_R1 3 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 TEVSET(0.003)ARPS(0.162)S(0.831)PDT(0.004)R;TEVSETARPS(0.233)S(0.762)PDT(0.005)R;TEVSETARPS(0.153)S(0.847)PDTR 170.61 9.2368e-28 88059200.0 4101.32 5415.99 5001.639999999999 4571.27 6337.59 4172.12 4268.54 4375.87 6788.78 6480.83 6661.91 True False 4793.522548353095 5691.6407574363275 5710.947761097029 5691.231355212109 5405.3389063547065 4613.610969170883 5044.078465123288 4996.162973039842 5251.132169453987 5016.806001868087 5007.57388763756 0.9572544820930343 1.1366064455858667 1.1404620060017332 1.136524688984086 1.0794326809034467 0.9213265890216275 1.0072898729614053 0.9977212688511918 1.0486379806432236 1.0018436301565752 1.0 12.289896088077375 -7.020397768310433 24.540335207958883 1.0132053423261698 1.1003480520167328 0.3884009572268906 0.056394483345443364 507.9336179701831 611089.653521957 0.008156123021185522 0.014239210665821159 9.541183131543464e-08 7.020397768310433 0.08714270969056304 TEVSETARPSS(ph)PDTR ddPTM_A549_PD325901_60min_R1 3 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 TEVSETARPS(0.041)S(0.959)PDTR;TEVS(0.001)ET(0.047)ARPS(0.189)S(0.763)PDTR;TEVSETARPS(0.039)S(0.96)PDT(0.001)R 181.08 1.0101e-33 97640400.0 5268.290000000001 5700.29 5733.24 6048.84 7243.639999999999 6403.139999999999 6263.86 6402.89 6548.01 6773.549999999999 5998.67 True False 5803.122922489887 6180.673443469498 6122.332143172831 6422.463108887631 6734.871715601391 6350.994950794298 6502.23462001571 6275.179335979965 6272.819911018151 6345.866897018727 5260.871618702173 1.1030725216445187 1.1748382951405751 1.1637486308177913 1.2207982962473463 1.2801817272368348 1.2072134450528662 1.235961470129882 1.1928022181100126 1.1923537325485278 1.206238691409888 1.0 12.361086129009337 -10.503761464307326 0.7044649800835261 0.9916389218991734 1.2012944313977083 0.0 0.07333823060600342 0.3129509157430609 0.264066825680676 0.037018090239561596 0.009137150219255576 3.135007150222923e-11 10.503761464307326 0.20965550949853495 TEWLDGK ddPTM_A549_MK2206_60min_R1 2 TEWLDGK 7 0 P62937;P62937-2;P0DN26;F5H284;A0A0B4J2A2;Q9Y536;A0A0H2UH34;P0DN37;A0A075B759;A0A075B767 P62937 PPIA;PPIAL4D;PPIAL4C;PPIAL4A;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C 0 ; 112.17 0.02189 18780400.0 5850.9 5932.2 4598.8 4342.5 8092.5 6707.8 6503.1 6162.8 9050.7 8584.6 8501.8 False True 6838.388879228913 6234.123641525153 5250.978991637341 5406.412694942233 6902.103970069929 7417.61494372272 7684.629092510146 7036.395772783448 7000.730900998001 6645.332897736363 6390.568422256828 1.0700752151267847 0.9755194263804743 0.8216763587648059 0.845998718378945 1.0800453909595185 1.160712858951472 1.2024953939537542 1.101059453221306 1.0954785925796713 1.0398656987369466 1.0 12.641728545020431 -6.779731460438951 24.726052820746546 1.073381204571833 0.924071787248607 0.48530663343447833 0.08126739218086912 171.7672107354106 232183.56861921423 0.013460902723088764 0.02547390758746494 1.660613405750852e-07 6.779731460438951 -0.149309417323226 TEWLDGK ddPTM_A549_PD325901_60min_R1 4 TEWLDGK 7 0 P62937;P62937-2;P0DN26;F5H284;A0A0B4J2A2;Q9Y536;A0A0H2UH34;P0DN37;A0A075B759;A0A075B767 P62937 PPIA;PPIAL4D;PPIAL4C;PPIAL4A;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C 0 ;;; 126.67 0.016205 32207000.0 18577.0 14945.599999999999 14905.099999999999 16653.8 16151.1 17195.6 14521.099999999999 13681.2 20770.6 18451.0 21954.100000000002 False True 20462.923364335413 16205.118163587755 15916.649717647506 17682.46740247598 15016.702454270173 17055.564734783005 15073.708406750824 13408.317733306229 19897.683913707155 17286.000711132652 19253.88487850631 1.0627945213892283 0.8416544643246525 0.8266721141256922 0.9183843943211404 0.7799310398408879 0.8858245929278743 0.782891790507071 0.6963954452783883 1.033437357669025 0.8977928776560586 1.0 14.232861948966578 -8.798745832980869 24.999789727969247 1.015789931181228 0.8473000340132547 0.23826041964980327 0.09504817136034069 108.30569188821407 72577.30720564496 0.014734476317051163 0.015686234648951653 1.5894767036837857e-09 8.798745832980869 -0.16848989716797325 TEYMAFPKPFES(ph)SSSIGAEKPR ddPTM_A549_MK2206_60min_R1 4 TEYMAFPKPFESSSSIGAEKPR 22 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 TEYMAFPKPFES(0.25)S(0.25)S(0.25)S(0.25)IGAEKPR;TEYMAFPKPFES(0.25)S(0.25)S(0.25)S(0.25)IGAEKPR;TEYMAFPKPFES(0.304)S(0.304)S(0.304)S(0.088)IGAEKPR;TEYMAFPKPFES(0.315)S(0.315)S(0.315)S(0.056)IGAEKPR 65.423 0.00020752 32103900.0 8216.3 8484.9 9400.8 8206.6 11986.2 8808.7 8082.5 7383.0 12617.399999999998 12874.400000000001 12526.900000000001 True False 9603.010570751245 8916.745168061894 10733.974798770181 10217.21736840827 10223.045858023124 9740.830787258172 9550.985628425398 8429.562859489231 9759.579045847513 9966.064098340874 9416.125005148217 1.0198473964078483 0.9469654622455321 1.1399567011803091 1.0850766491334876 1.0856956393881483 1.0344840135334252 1.0143223059595585 0.8952263117662959 1.036475093577402 1.0584039711550113 1.0 13.200917757875139 -7.626266146751581 3.719098196475567 1.006412368728217 1.0560744755037899 0.16080887174969682 0.05884277486451092 0.36987057130158246 9.861280979081933 0.00909948270617269 0.013766616222770558 2.3644702456389897e-08 7.626266146751581 0.04966210677557292 TEYMAFPKPFESSS(ph)SIGAEKPR ddPTM_A549_PD325901_60min_R1 2 TEYMAFPKPFESSSSIGAEKPR 22 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 TEYMAFPKPFES(0.028)S(0.028)S(0.472)S(0.472)IGAEKPR;TEYMAFPKPFES(0.153)S(0.153)S(0.657)S(0.036)IGAEKPR 119.45 8.8408e-16 33089000.0 7030.3 6628.0 8108.5 8633.2 8923.5 7720.299999999999 8910.8 8880.4 9024.8 8505.2 8966.7 True False 7744.010880566677 7186.564820968024 8658.79157037153 9166.453156580224 8296.744144403783 7657.428436457304 9249.905370176852 8703.273455460969 8645.519040587393 7968.180220493493 7863.852744594514 0.9847604135122934 0.9138732698050525 1.101087704919633 1.1656440493346085 1.0550482586422834 0.9737502322536364 1.1762561775505127 1.106744205179002 1.0993999152044376 1.0132667128044446 1.0 12.94102059125509 -5.7617530365209175 24.999999091794027 1.0667038897912045 0.9493168249893639 0.3672514353978116 0.0634171262821861 7.057184076634342 562749.6039381966 0.009349462994326908 0.031975105437111274 1.730800306679509e-06 5.7617530365209175 -0.11738706480184058 TEYMAFPKPFESSSS(ph)IGAEKPR ddPTM_A549_PD325901_60min_R1 1 TEYMAFPKPFESSSSIGAEKPR 22 2 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 TEYMAFPKPFES(0.057)S(0.18)S(0.18)S(0.583)IGAEKPR 75.868 6.9748e-05 14000000.0 4621.5 3710.5 4167.4 4555.4 5125.1 5670.8 4630.6 5266.8 5435.1 5516.0 5169.7 True False 5090.671277831515 4023.1968570008835 4450.224824611989 4836.7767119359605 4765.130656635158 5624.61888494775 4806.820016961548 5161.749542275332 5206.681648069378 5167.718818633553 4533.859673428383 1.1228118302086942 0.8873668676998664 0.9815532780366907 1.0668121777749067 1.0510097356039019 1.240580717112174 1.0602048504352497 1.1384890389366982 1.1483993822270695 1.1398056382115291 1.0 12.14652402387005 -6.375764987109573 3.3104537460668357 1.087460594346939 0.9862479077065976 0.2452549003457435 0.0801954400851517 0.31034567256707596 6.346166277574031 0.01222041895530001 0.03087313438918343 4.209543608165899e-07 6.375764987109573 -0.10121268664034144 TEYQATHGS(ph)R ddPTM_A549_MK2206_60min_R1 2 TEYQATHGSR 10 0 Q9H329-2;Q9H329 Q9H329-2 EPB41L4B Band 4.1-like protein 4B 1 TEYQAT(0.09)HGS(0.91)R;TEYQAT(0.004)HGS(0.996)R 89.663 0.00020847 10483300.0 972.74 1045.83 885.71 682.11 1054.8600000000001 774.77 560.31 517.0799999999999 1215.9099999999999 1348.45 1559.75 True False 1136.9147307903281 1099.0582798988987 1011.3169963214565 849.2269806210816 899.6914913645921 856.7556471492971 662.1110742298835 590.3776734910864 940.5083264092802 1043.8342084608018 1172.421028089945 0.9697154038959349 0.9374262773923755 0.8625885855775277 0.7243361900499206 0.7673791835944197 0.7307576601087449 0.5647383135976031 0.5035543199467369 0.8021933280585335 0.8903236836014184 1.0 10.195275033654298 -4.312882634253679 16.368390728789038 0.8339962976217875 0.7937503612375741 0.0 0.1568118576979612 0.0 0.0 0.02421088034054577 0.0 4.865386723841938e-05 4.312882634253679 -0.040245936384213365 TEYQATHGS(ph)R ddPTM_A549_PD325901_60min_R1 2 TEYQATHGSR 10 0 Q9H329-2;Q9H329 Q9H329-2 EPB41L4B Band 4.1-like protein 4B 1 TEYQAT(0.009)HGS(0.991)R;TEYQAT(0.001)HGS(0.999)R 78.486 0.00040815 14210900.0 1758.9499999999998 2118.66 1671.4 1688.25 2456.7 1972.69 1789.83 1987.1 1806.03 2212.3599999999997 2077.3199999999997 True False 1937.517309129447 2297.2069136379155 1784.831254944685 1792.5293682060608 2284.1498671549007 1956.6250666832861 1857.9429600825572 1947.4657316502075 1730.1288397385038 2072.671212036281 1821.822809216443 1.063504803720601 1.260938715892976 0.9796953062149508 0.98392080675344 1.2537716926144438 1.073993067154989 1.0198263797573428 1.0689655008149794 0.9496691066693932 1.137690889339412 1.0 10.831166933870248 -8.20116929064232 1.3792224018520964 0.9776929548007323 1.1042975835113071 0.002635190037986068 0.10090164509067619 0.3875856200557883 1.4416570342244432 0.015795094783759255 0.021058841908370957 6.292608453213642e-09 8.20116929064232 0.12660462871057487 TFANFPSGS(ph)PVSASTLAR ddPTM_A549_PD325901_60min_R1 1 TFANFPSGSPVSASTLAR 18 0 P98170;B1AKU2 P98170 XIAP E3 ubiquitin-protein ligase XIAP 1 T(0.001)FANFPS(0.371)GS(0.495)PVS(0.04)AS(0.047)T(0.047)LAR 52.861999999999995 0.013972 1520900.0 3597.4 2865.4 3231.9 3538.2 4281.0 4224.6 4359.5 3382.7 3644.9 4265.7 4161.2 True False 3962.6053997340914 3106.877314122175 3451.236168993494 3756.7465781647775 3980.31732864824 4190.196258261664 4525.403158109934 3315.229394823187 3491.717528481183 3996.362974011082 3649.3987800201508 1.0858241695669695 0.8513394949140143 0.9456999295030283 1.0294152008633142 1.0906775522696541 1.1481881018874367 1.2400407384596501 0.9084316608460316 0.9567925400747525 1.0950743437221775 1.0 11.833443091523925 -4.925674069595396 19.93898651454393 1.0024736366188498 3.614593957507068 0.0 0.10944199797493906 978.4933907507556 267248.8180735394 0.014784928296316991 2057.1824405779194 1.1866589808612697e-05 4.925674069595396 2.612120320888218 TFCPPPLPKPSSTTPT(ph)PLVSETGGNSPSDKVDNELK ddPTM_A549_PD325901_60min_R1 1 TFCPPPLPKPSSTTPTPLVSETGGNSPSDKVDNELK 36 2 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 TFCPPPLPKPS(0.041)S(0.041)T(0.041)T(0.041)PT(0.234)PLVS(0.212)ET(0.191)GGNS(0.191)PS(0.007)DKVDNELK 54.184 0.0013153 5760600.0 845.74 1013.4 1172.8 599.0 937.47 1120.2 1135.7 862.53 1165.0 903.64 1027.0 True False 931.5989021991181 1098.8027745276097 1252.393260619317 635.998869572297 871.6253412959281 1111.0774626011269 1178.9196849788855 845.3261625083044 1116.039101396631 846.5840161838328 900.6855106893913 1.0343220704039808 1.219962752244763 1.3904889617472873 0.7061275684178586 0.9677354980749937 1.2335909142700652 1.3089137895385168 0.9385364286156724 1.2390996503789724 0.9399329800874127 1.0 9.81487964279447 -7.257718958276697 24.848272938231958 1.1248826505247949 1.0706938925970473 0.010249594668800488 0.1936819024108904 1450.120350042064 9685180.036761591 0.02889344159634698 0.04884173857443226 5.5243481662483075e-08 7.257718958276697 -0.05418875792774758 TFDEIAS(ph)GFR ddPTM_A549_MK2206_60min_R1 2 TFDEIASGFR 10 0 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 TFDEIAS(1)GFR;TFDEIAS(1)GFR 110.08 0.00019652 4325200.0 1419.51 1687.18 1239.6399999999999 1558.23 2187.0 1438.72 1566.08 1484.0 1654.1599999999999 1689.98 2066.94 True False 1659.0885843125375 1773.050255471562 1415.4395923269808 1939.9964199516032 1865.2951971013806 1590.9643954549565 1850.616464332132 1694.3615445593944 1279.4954011507223 1308.212344257915 1553.661753358058 1.0678570034478945 1.1412073777573024 0.9110345860465922 1.2486607305345119 1.2005799802111132 1.024009500147811 1.1911321497953085 1.0905601176686175 0.8235353662952974 0.8420187607954995 1.0 10.601456734438145 -8.669268600359882 7.261768521897005 0.9168788501925939 1.1125168234924088 0.4978613415832115 0.09776090278107681 0.15737205566462575 10.712411892865859 0.01741749890292214 0.01973512404169469 2.1415656862156037e-09 8.669268600359882 0.19563797329981492 TFDEIAS(ph)GFR ddPTM_A549_PD325901_60min_R1 2 TFDEIASGFR 10 0 P11166 P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 1 TFDEIAS(1)GFR;TFDEIAS(1)GFR 108.35 0.00024224 7127500.0 2257.6 2387.1 2606.8999999999996 2721.7 2969.3999999999996 2710.0 3064.6000000000004 2671.7 2283.2 2572.0 3027.0 True False 2486.789890042719 2588.269294528178 2783.8199105631797 2889.8132275708194 2760.839587873883 2687.930658497637 3181.225030013467 2618.410847591895 2187.245044041877 2409.603481059734 2654.6981897339715 0.9367505126041923 0.9749768559519565 1.04863894559786 1.0885656376103563 1.0399824727912095 1.0125183604268762 1.1983377403561868 0.9863308973191741 0.8239147683530315 0.9076751136449155 1.0 11.374332136303789 -8.526109253053367 24.85983504950536 0.9162314852559533 1.0445950894648341 0.3858182712959727 0.07306700556910183 81.76742709274691 629223.5930995967 0.014654903974360095 0.016658524509876278 2.9777672348150275e-09 8.526109253053367 0.12836360420888082 TFDETVSTYVPLAQQVEDFHKRT(ph)PNR ddPTM_A549_MK2206_60min_R1 3 TFDETVSTYVPLAQQVEDFHKRTPNR 26 2 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 TFDETVSTYVPLAQQVEDFHKRT(1)PNR;TFDETVSTYVPLAQQVEDFHKRT(1)PNR;TFDETVSTYVPLAQQVEDFHKRT(1)PNR 125.74 4.1381e-18 28706300.0 2371.48 2618.62 2767.29 2628.74 3650.6900000000005 2764.65 2596.07 2729.4 3344.58 3842.2400000000002 4083.49 True False 2771.7278468806126 2751.8965729696542 3159.733333427873 3272.7814180086234 3113.678337039801 3057.2034279738546 3067.742314925622 3116.300808436935 2587.037970196767 2974.2753154484285 3069.4467344093673 0.9030056836656452 0.8965448209672818 1.029414616649433 1.0662447343750314 1.0144102851287775 0.9960112334583748 0.9994447144286173 1.015264664313057 0.8428352709937393 0.9689939499864779 1.0 11.58376291893621 -8.71007495131728 24.99994094871114 0.9257828089211065 0.992103114762866 0.1255370314215536 0.05978587581292581 149.16168189111818 72599.25047667007 0.012583123083743947 0.014267910725725851 1.949508121130729e-09 8.71007495131728 0.06632030584175941 TFDETVSTYVPLAQQVEDFHKRT(ph)PNR ddPTM_A549_PD325901_60min_R1 6 TFDETVSTYVPLAQQVEDFHKRTPNR 26 2 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 TFDETVSTYVPLAQQVEDFHKRT(1)PNR;TFDETVSTYVPLAQQVEDFHKRT(1)PNR;TFDETVSTYVPLAQQVEDFHKRT(1)PNR;TFDETVSTYVPLAQQVEDFHKRT(0.999)PNR;TFDETVSTYVPLAQQVEDFHKRT(1)PNR;TFDETVSTYVPLAQQVEDFHKRT(1)PNR 148.89 1.0174e-32 51580500.0 7346.6 6909.889999999999 7797.94 8097.639999999999 8960.86 8249.150000000001 9191.22 8965.21 9219.99 8072.779999999999 10135.779999999999 True False 8092.421423718924 7492.210680561064 8327.155101222543 8597.812831725238 8331.480106888788 8181.971657396963 9540.996906728566 8786.391853478815 8832.505883678898 7563.063293090747 8889.143316003228 0.9103713525633054 0.842849576637239 0.9367781354397863 0.9672262586031767 0.9372646846507163 0.9204454655002428 1.0733314299873866 0.9884407913258155 0.9936284712361014 0.8508202674013452 1.0 13.117828671848978 -6.41632621077824 0.6692324222466195 0.9997111066091886 0.8663820758135697 0.15803405940765436 0.05895687642400191 0.585102229612318 0.3825566964924236 0.006553107585786384 0.04450223093038601 3.83419140423e-07 6.41632621077824 -0.13332903079561886 TFEGIDPK ddPTM_A549_MK2206_60min_R1 2 TFEGIDPK 8 0 P50395-2;P50395;Q5SX86;Q5SX87 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 ; 84.476 0.008744499999999999 3495300.0 3483.3 4083.5 3903.2 3909.2 5350.5 3304.2 3343.8 4232.6 5455.299999999999 4903.9 6036.8 False True 4071.1958814914037 4291.33270796129 4456.732451978533 4866.954175490656 4563.448537764493 3653.8482508495504 3951.325177151732 4832.584011793869 4219.683260323994 3796.105584093535 4537.695952795884 0.8971945066048226 0.9457074146444743 0.9821575747560906 1.0725606620892922 1.0056752557325357 0.8052210392364975 0.8707778613322776 1.0649862974658517 0.9299175846552812 0.8365711637763167 1.0 12.147744229483493 -11.01437105387187 1.1885246798973852 1.0010579986059034 0.9522986319905329 0.0 0.08985693528836254 1.5011441639938448 3.634330332872257 0.06216134425858411 0.012820734279244671 9.674509293176486e-12 11.01437105387187 -0.0487593666153705 TFEGIDPK ddPTM_A549_PD325901_60min_R1 2 TFEGIDPK 8 0 P50395-2;P50395;Q5SX86;Q5SX87 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 ; 77.923 0.012123 5899600.0 5506.6 5603.5 5837.6 5892.3 7092.4 7560.4 6608.3 6972.2 6012.9 6295.0 7516.6 False True 6065.625978255333 6075.726610484958 6233.774640340494 6256.2539886157665 6594.254291451716 7498.830609042629 6859.782472700514 6833.134001414907 5760.198723423003 5897.532625688576 6592.105851653241 0.9201347967939757 0.9216670282928209 0.9456423759908406 0.9490524165425459 1.0003259109982185 1.1375470567060129 1.0406056315039514 1.0365631491947627 0.8738025227520272 0.8946356078626267 1.0 12.686523693207054 -6.165134487945645 2.1698239873935043 0.9724570036357626 0.9223970703998221 0.10245033279848725 0.06989296693132017 0.8477366529995783 7.647546667360339 0.012051908919896657 0.04121429585512103 6.836998931920812e-07 6.165134487945645 -0.05005993323594049 TFEMSDFIVDTR ddPTM_A549_PD325901_60min_R1 1 TFEMSDFIVDTR 12 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 52.49 0.015004 1421400.0 1703.5 1771.4 1995.5 2427.7 2884.4 2125.6 2571.7 2686.1 2466.9 2079.2 2526.7 False True 1876.4380659495812 1920.6820947288402 2130.926629916309 2577.6535152932643 2681.809694639802 2108.2898183404345 2669.5674507882354 2632.5236282953133 2363.2247718758344 1947.9189571615082 2215.93191807097 0.8467940962658602 0.8667604266474248 0.9616390343667868 1.1632367828056662 1.2102401128706117 0.9514235528390056 1.2047154648650793 1.1879984248735393 1.0664699364649646 0.8790518071770118 1.0 11.113697841604134 -5.963796521047823 3.6624280015857695 1.0697701729373814 0.8591776710044948 0.4212403736340298 0.10304067734558894 0.1558765100478097 4.425608635077958 0.01310256045114058 0.04394209139019479 1.0869347632729501e-06 5.963796521047823 -0.2105925019328866 TFGHNT(ph)MDAVPR ddPTM_A549_MK2206_60min_R1 10 TFGHNTMDAVPR 12 0 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 T(0.003)FGHNT(0.997)MDAVPR;T(0.003)FGHNT(0.997)MDAVPR;TFGHNT(1)MDAVPR;TFGHNT(1)MDAVPR;T(0.012)FGHNT(0.988)MDAVPR;TFGHNT(1)MDAVPR;TFGHNT(1)MDAVPR;T(0.005)FGHNT(0.995)MDAVPR;TFGHNT(1)MDAVPR;TFGHNT(1)MDAVPR 141.85 9.5549e-12 372500200.0 27621.8 27650.339999999993 25287.03 25043.780000000006 35400.899999999994 29217.7 28021.599999999995 27277.68 42584.40000000001 44331.100000000006 43548.299999999996 True False 32283.68455182707 29057.624201848987 28873.11109222041 31179.507224258017 30193.474505288657 32309.497620860388 33112.76200253451 31144.374674391467 32939.10139331313 34316.67372071393 32734.05523806336 0.986241524829084 0.8876878831700816 0.8820511507736011 0.9525097638377018 0.9223872290097287 0.9870300940682322 1.0115691979413166 0.951436491687 1.0062640010154118 1.0483477672149306 1.0 14.998504720381183 -7.306022285540409 3.604169308729171 0.9990026194687539 0.9224018438851553 0.5436904655475563 0.034053602639199224 0.1243929786653759 3.3578509171234985 0.004424257752825004 0.0074279574088506935 4.942853224044744e-08 7.306022285540409 -0.07660077558359857 TFGHNT(ph)MDAVPR ddPTM_A549_PD325901_60min_R1 6 TFGHNTMDAVPR 12 0 G3XAL9;P55011;P55011-3 G3XAL9 SLC12A2 Solute carrier family 12 member 2 1 T(0.002)FGHNT(0.998)MDAVPR;T(0.002)FGHNT(0.998)MDAVPR;T(0.004)FGHNT(0.996)MDAVPR;T(0.034)FGHNT(0.966)MDAVPR;TFGHNT(1)MDAVPR;TFGHNT(1)MDAVPR 157.03 7.4053e-14 689708000.0 28346.7 29071.899999999998 33478.6 33883.3 39009.1 34391.3 33480.1 38383.2 37970.399999999994 39599.1 42111.200000000004 True False 31224.436116262383 31521.891040841914 35750.65911917624 35976.19448644241 36269.23539008928 34111.22865519918 34754.20352651371 37617.616964962115 36374.636133622844 37098.806067975296 36931.78936489105 0.84546231453236 0.8535164849285094 0.9680186022387088 0.9741254107942826 0.9820600629919215 0.9236278350386885 0.9410376297540719 1.0185701156609284 0.984913993043677 1.0045223019506069 1.0 15.172575543130504 -3.363161035320221 0.4403840770182437 0.9915935389845942 2.439581705803597e-14 0.7125804369353226 0.029871484758237875 8.102422199382556 0.28186660572504674 0.006169964584180537 6.083077064710165 0.00043335016342375146 3.363161035320221 -0.9915935389845698 TFIAIKPDGVQR ddPTM_A549_MK2206_60min_R1 2 TFIAIKPDGVQR 12 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;F6XY72;E5RHP0;C9K028 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 102.52 0.00021178 27626000.0 9265.099999999999 10709.4 9479.0 8769.7 13179.0 10172.8 9572.7 10087.9 14963.2 12860.599999999999 12932.7 False True 10828.822370053109 11254.462716454176 10823.264734654773 10918.276893686792 11240.386558115733 11249.278943841868 11311.935678964162 11517.890717898057 11574.059091320367 9955.381527925392 9721.15366563798 1.113944161620496 1.1577291238833194 1.1133724562870042 1.123146209722038 1.1562811313072736 1.1571958772347624 1.1636412783957142 1.184827553812993 1.1906055072693664 1.0240946569042884 1.0 13.246911821634047 -10.816147706440109 1.035678214298303 0.9990252428404242 1.153233267679879 0.8153327748164404 0.02543032289853715 0.1787217904590586 0.33684622335304626 0.020243213034399528 0.004895726190249293 1.5270466112064303e-11 10.816147706440109 0.15420802483945495 TFIAIKPDGVQR ddPTM_A549_PD325901_60min_R1 2 TFIAIKPDGVQR 12 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;F6XY72;E5RHP0;C9K028 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 123.02 9.4031e-06 67371000.0 19647.9 20649.1 22174.8 21118.9 26849.0 23782.0 21454.0 24115.0 25598.0 24598.0 23211.0 False True 21642.540343980494 22389.27212502274 23679.71527590487 22423.366488498134 24963.21886402164 23588.327276896976 22270.443710079267 23634.007407148485 24522.20507944288 23044.878082079045 20356.19414665186 1.0631918809607253 1.0998751516970218 1.1632682958960507 1.1015500405897967 1.2263205334051865 1.1587788516340483 1.0940376943566468 1.1610228924366863 1.2046556887195063 1.1320818575445457 1.0 14.3131802357078 -10.936140488988862 1.1831917490256025 0.9996584111457194 1.1473478867369749 0.04769976832791578 0.06034892535433581 0.2926907096323606 0.7254003211081612 0.03522830583995663 0.008189211587384282 1.158402566381074e-11 10.936140488988862 0.14768947559125545 TFKES(ph)PK ddPTM_A549_MK2206_60min_R1 4 TFKESPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.016)FKES(0.984)PK;T(0.001)FKES(0.999)PK;T(0.004)FKES(0.996)PK;T(0.001)FKES(0.999)PK 73.067 0.0053785 629894800.0 23165.7 26924.3 24020.8 21659.0 33417.2 26397.6 26420.100000000002 26224.699999999997 36365.4 33047.9 32728.0 True False 27075.50381301223 28294.63186701654 27427.310638062598 26965.455972309457 28501.574147497162 29190.97651069129 31220.290182686298 29942.131534775464 28128.694963610844 25582.356437236638 24600.734353151292 1.100597381538894 1.1501539531640879 1.114898045088204 1.0961240256169527 1.158565989874452 1.1865896396280544 1.2690796028488092 1.2171234852157962 1.143408751942709 1.0399021456023976 1.0 14.586413761448792 -10.282757435339896 0.8837808792663838 1.0078001993453771 1.1603295599848087 0.5327865746907771 0.049889491622534504 0.3214411519561178 0.48620190143863634 0.02762681466842127 0.010609595774654887 5.214858930914033e-11 10.282757435339896 0.15252936063943157 TFKES(ph)PK ddPTM_A549_PD325901_60min_R1 6 TFKESPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.125)FKES(0.875)PK;T(0.03)FKES(0.97)PK;T(0.115)FKES(0.885)PK;T(0.006)FKES(0.994)PK;T(0.005)FKES(0.995)PK;T(0.001)FKES(0.999)PK 81.33800000000001 0.006157899999999999 1002486000.0 54855.3 52121.299999999996 54788.3 52264.700000000004 62110.5 50900.799999999996 53015.200000000004 56274.5 55085.4 53677.1 55380.1 True False 60424.16967366248 56513.74487071823 58506.56350681221 55492.97181725414 57748.0727495928 50486.28076090645 55032.7224470306 55152.06095100877 52770.35220263858 50287.91874540878 48568.698783378364 1.244096942830624 1.1635836719195551 1.2046145968982573 1.1425665749201719 1.1889977330287442 1.0394818478889192 1.133090320012123 1.135547427304835 1.0865094911848483 1.0353976945048151 1.0 15.567739214811352 -2.00000000369673 0.05177013019176691 0.7290491758218385 1.9058868114144787 0.7344030575266387 0.03775639808820014 111.4032647937686 0.422677921373749 2.174086285350359 10.276751698057005 0.009999999914879645 2.00000000369673 1.1768376355926402 TFKES(ph)PKQILDPAAR ddPTM_A549_MK2206_60min_R1 2 TFKESPKQILDPAAR 15 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.235)FKES(0.765)PKQILDPAAR;T(0.088)FKES(0.912)PKQILDPAAR 56.081 0.0042266000000000005 8805800.0 4992.1 6260.4 6743.9 6651.6 7093.9 4823.0 4757.3 4650.1 7872.299999999999 9004.7 9869.3 True False 5834.644434873034 6579.027619669609 7700.286427264307 8281.242298601666 6050.396707232505 5333.3666587517055 5621.639830511372 5309.265915333995 6089.236619479881 6970.532015964242 7418.480431176848 0.7865012907970214 0.8868430240808669 1.0379870242567661 1.116299001585147 0.8155843724821535 0.7189298008171243 0.7577885906237499 0.7156810568672953 0.8208199342131176 0.9396172276292513 1.0 12.856907986478781 -5.265997001010331 6.9071766153361445 0.8920023602834158 0.7849969259556809 0.037849233717463626 0.12632074076216604 0.3036309781187845 106.31158546953192 0.019384023030763017 0.15315461394527544 5.420046331631622e-06 5.265997001010331 -0.1070054343277349 TFKES(ph)PKQILDPAAR ddPTM_A549_PD325901_60min_R1 3 TFKESPKQILDPAAR 15 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.256)FKES(0.744)PKQILDPAAR;T(0.026)FKES(0.974)PKQILDPAAR;T(0.062)FKES(0.938)PKQILDPAAR 97.49 2.9754000000000003e-06 103978500.0 9075.7 9237.5 10677.4 10607.5 11222.5 14626.7 12933.900000000001 14450.3 13060.2 12000.9 12823.9 True False 9997.058382822781 10015.976544009072 11402.032572422144 11262.701183619605 10434.270315523221 14507.585004666935 13426.106642201654 14162.07743045894 12511.325212068905 11243.161125913592 11246.641597399886 0.8888927682317185 0.8905748847126655 1.0138166557257575 1.0014279450519195 0.927767656251758 1.2899481928917294 1.193788076727335 1.2592272375544602 1.1124498903709532 0.9996905323730508 1.0 13.45720663662563 -6.366824907154673 1.1693761900494755 1.0930400202710477 0.8972203639054485 0.394571615705403 0.10514574355019794 0.5354684031538032 1.3197170107702259 0.017971692929759787 0.0775380877462575 4.297096362370748e-07 6.366824907154673 -0.19581965636559928 TFKESPK ddPTM_A549_MK2206_60min_R1 2 TFKESPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 0 ; 54.405 0.043002 6202100.0 4572.799999999999 5254.1 5287.6 5025.4 6763.4 6077.9 5847.0 5142.1 7866.8 7614.5 7705.5 False True 5344.576845773807 5521.51124792443 6037.46118904532 6256.623225598779 5768.512819421803 6721.059343816502 6909.324215206107 5871.008422020796 6084.982360698185 5894.379161500077 5792.011689018798 0.922749665009604 0.9532976700293585 1.042377245282822 1.0802159183243445 0.9959428829120723 1.1604015503903602 1.1929057788860553 1.0136389111837896 1.050581850902483 1.0176739064037732 1.0 12.499848798628861 -5.705034340957452 3.687079559923723 1.0470863195722953 0.9295528399973406 0.3580207675578676 0.0618758283570419 0.21522241942354103 5.781856380082562 0.00928411051224484 0.04045133292851742 1.9722667769439415e-06 5.705034340957452 -0.11753347957495464 TFLDKDAQRLS(ph)PIPEEVPK ddPTM_A549_MK2206_60min_R1 4 TFLDKDAQRLSPIPEEVPK 19 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK;T(0.006)FLDKDAQRLS(0.994)PIPEEVPK 158.77 3.0092e-27 373377000.0 15267.3 17405.2 18762.600000000002 16928.6 21123.600000000002 18477.0 16667.800000000003 15604.099999999999 25159.9 25528.0 24964.6 True False 17844.046990352184 18291.050336380027 21423.418811101772 21076.107759953742 18016.346422263723 20432.223875960044 19696.12350850219 17816.028960552052 19461.222822104308 19761.207070034005 18765.20083209118 0.9509115916221003 0.9747324582372554 1.1416567828288124 1.1231485316112673 0.960093450822716 1.0888358754476006 1.0496089908517792 0.9494185071594913 1.0370911026341285 1.0530773023350495 1.0 14.195772110110685 -10.489238656306961 0.3596354965943295 0.9924584941776914 1.0387119338310256 0.0 0.06613397707945129 7.971442245263743 1.4734552844055688 0.14343431917043029 0.02539491857131916 3.2416143311224986e-11 10.489238656306961 0.04625343965333417 TFLDKDAQRLS(ph)PIPEEVPK ddPTM_A549_PD325901_60min_R1 6 TFLDKDAQRLSPIPEEVPK 19 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 T(0.045)FLDKDAQRLS(0.955)PIPEEVPK;T(0.114)FLDKDAQRLS(0.886)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK 151.94 8.457e-22 705453700.0 18541.3 17361.8 19013.2 17271.3 22331.199999999997 20803.8 20070.9 21951.500000000004 21042.2 20446.4 22813.2 True False 20423.599126616366 18824.939817242397 20303.550087659623 18338.10897503174 20762.733550457757 20634.380750277905 20834.709082717898 21513.66011188139 20157.869510221608 19155.410814595536 20007.3210247899 1.0208062889234735 0.940902572309282 1.0148060333766167 0.9165699371899948 1.0377568053579922 1.0313415136744721 1.0413542651163956 1.0752893945783681 1.0075246698568574 0.9574200759242673 1.0 14.288240383225075 -6.8046500221790716 24.99999692353651 1.0161664441501082 0.9739254604324911 0.2534378596237994 0.039153277780086815 147.73304421915768 85472.16116430344 0.005077202586981863 0.009595065040558667 1.5680141511368032e-07 6.8046500221790716 -0.04224098371761709 TFLEGDWT(ph)SPSK ddPTM_A549_MK2206_60min_R1 1 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.5)S(0.5)PS(0.001)K 202.29 9.8725e-25 18399000.0 3578.2 3870.9 2659.1 2639.3 5194.2 3711.6 3291.1 3706.0 5761.0 5123.2 6264.4 True False 4182.112681409167 4067.912276049309 3036.2003645870345 3285.928618482678 4430.140060715134 4104.359048439317 3889.0502693115805 4231.336849149003 4456.142698426582 3965.865561783072 4708.7765913554385 0.8881527080912816 0.8639000379668355 0.6447960113803262 0.6978306476708022 0.9408261306871434 0.8716402166911602 0.825915223170973 0.8986064144383196 0.9463482949281025 0.8422284397743073 1.0 12.201136560030571 -8.329620309266005 0.5708542168948368 0.9913775769847963 0.788491296247871 0.18904318729639524 0.0900401220294676 0.47143581231854487 0.3320978172777823 0.023856922326924015 0.03185624613912716 4.681442470023793e-09 8.329620309266005 -0.20288628073692538 TFLEGDWT(ph)SPSK ddPTM_A549_PD325901_60min_R1 1 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.726)S(0.272)PS(0.002)K 202.29 9.8725e-25 24367000.0 7410.6 6673.6 5566.4 6308.8 5578.2 6577.1 5649.6 5055.7 8414.7 6866.9 8416.6 True False 8162.918656604615 7236.007693001236 5944.169377482404 6698.4802476756395 5186.406475745301 6523.538278230552 5864.598619579748 4954.860097380073 8061.059421907495 6433.322762087515 7381.411557223302 1.1058750204243177 0.9803013470940016 0.8052889791337483 0.9074795783633878 0.7026307144017714 0.8837792375696418 0.7945090954643721 0.671261866239032 1.09207559548947 0.8715572505630029 1.0 12.84968101583629 -8.792273653560013 24.999700257884676 1.0434801722784024 0.8542454412465226 0.13686689903036298 0.12762106463118472 162.62797512268844 131854.19541467918 0.02072730783346026 0.022067025562348463 1.6133416527894826e-09 8.792273653560013 -0.18923473103187982 TFLEGDWTS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.438)S(0.561)PS(0.001)K 89.23100000000001 0.00027565 18086000.0 1408.4 1388.5 1132.4 1222.2 1706.6 1442.6 1438.8 1483.2 2844.3 1431.0 1990.6 True False 1646.1034879259591 1459.1687192369902 1292.9913477711862 1521.639054866642 1455.561400719349 1595.2549744796213 1700.2113358711376 1693.4481421094988 2200.0705914137698 1107.7361061273366 1496.2790822348727 1.1001313240757906 0.9751982344480459 0.8641378223639591 1.0169486915461594 0.9727873750298595 1.0661480157143655 1.1362929256029346 1.131772917375902 1.47036112282456 0.7403272018431211 1.0 10.547163572858956 -7.7877485467353855 1.6573599669193397 1.220503606849569 0.9804270236963898 0.0 0.18549486198269352 0.362398062017822 2.0336621925776304 0.028945796181494825 0.04456499027227235 1.630239656035023e-08 7.7877485467353855 -0.24007658315317915 TFLEGDWTS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.003)S(0.974)PS(0.023)K 198.52 1.5741000000000002e-24 24132000.0 10505.0 7603.5 7745.7 8055.9 7484.6 7986.6 7657.3 6742.9 10837.0 8888.8 12267.0 True False 11571.459866627732 8244.27362948557 8271.36978067791 8553.49464672365 6958.907516468259 7921.559777548793 7948.7027417353365 6608.40756979728 10381.558576682652 8327.559651027901 10758.236766919932 1.0755907419892772 0.766322010576636 0.7688406529693798 0.7950647333793995 0.6468446147110206 0.7363251013313332 0.7388480950871505 0.6142649314167546 0.9649869956947301 0.7740636157622016 1.0 13.393154024723797 -8.873474770373118 8.30481260734306 0.9845227811970277 0.7628119638823945 0.14587404862889353 0.12803595853896146 0.15796867520001134 11.018993368451413 0.01874277109263143 0.019918008102276213 1.3382129541865348e-09 8.873474770373118 -0.22171081731463327 TFLESKEELSHS(ph)PEPCTK ddPTM_A549_MK2206_60min_R1 2 TFLESKEELSHSPEPCTK 18 1 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 TFLESKEELS(0.001)HS(0.999)PEPCTK;TFLESKEELS(0.002)HS(0.998)PEPCTK 123.12 7.896800000000001e-11 28937000.0 2443.19 3477.5 3644.7 2816.4 3575.5 2909.8 2959.6 3143.6000000000004 3831.0 4307.0 4479.5 True False 2855.540741739438 3654.4898963965647 4161.573264943164 3506.418126432999 3049.548686436208 3217.713104631084 3497.3210103170813 3589.214926871238 2963.2846168498927 3334.045708658589 3367.1165220893804 0.8480670992542614 1.0853470239066338 1.235945723185369 1.0413711861260977 0.9056855224433653 0.9556286762046513 1.0386694334376363 1.0659610094645728 0.8800659547745916 0.9901782984895723 1.0 11.7172979324483 -6.59594938591492 7.042016547222973 0.9579482690832953 1.072156097904193 0.09849662391557334 0.09864761568536896 0.2641428588206816 21.015844644490354 0.014490794640788106 0.030332539782394686 2.5354240998138903e-07 6.59594938591492 0.11420782882089775 TFLESKEELSHS(ph)PEPCTK ddPTM_A549_PD325901_60min_R1 4 TFLESKEELSHSPEPCTK 18 1 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 TFLESKEELS(0.03)HS(0.97)PEPCTK;TFLESKEELS(0.011)HS(0.989)PEPCTK;TFLESKEELS(0.001)HS(0.999)PEPCTK;TFLESKEELS(0.013)HS(0.986)PEPCTK 163.72 1.3386e-23 98071600.0 12286.2 14471.2 14758.599999999999 13975.099999999999 15753.0 15600.8 13417.7 16341.2 13190.8 14352.199999999999 16292.0 True False 13533.485979377594 15690.738810680814 15760.207346671425 14838.31018724508 14646.563624899733 15473.75225722875 13928.317915947167 16015.2619465766 12636.436548242633 13445.999642638231 14288.187283497142 0.9471800523645691 1.0981616141610644 1.1030235700279816 1.0385019381978098 1.0250820019567153 1.0829751843399293 0.9748135043018632 1.1208743018839227 0.8843974604698609 0.9410570687415585 1.0 13.80253527547969 -8.764793749234496 24.999953855037003 0.9454099139781625 1.0498131428703443 0.41648462849530166 0.056357606245027246 66.20022631584165 493385.49323088035 0.01049917507493327 0.011399975695245148 1.7187244326820677e-09 8.764793749234496 0.10440322889218179 TFLVGER ddPTM_A549_MK2206_60min_R1 2 TFLVGER 7 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 87.323 0.035801 4845500.0 1353.21 1768.3600000000001 1406.37 1277.23 1954.17 1459.06 1579.4499999999998 1470.1 2191.1 1865.43 2223.7 False True 1581.5987651919108 1858.3619707237483 1605.8144134272013 1590.1514073370338 1666.7141816733454 1613.4567607543572 1866.415620268049 1678.491176992431 1694.8193484677115 1444.028067402599 1671.4939190021553 0.9462186773231518 1.111797027555535 0.9607061055811899 0.9513354426597728 0.9971404398936352 0.9652782713786688 1.1166152619820822 1.0041862300010358 1.0139548395602187 0.8639146400632146 1.0 10.706922391013519 TFLVGER ddPTM_A549_PD325901_60min_R1 2 TFLVGER 7 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 137.18 0.015297 14130700.0 5770.9 6154.3 5735.700000000001 5580.0 7245.8 5873.9 6274.9 6259.3 5848.7 6529.9 6605.1 False True 6356.757519687955 6672.944459517733 6124.959093566009 5924.663926900533 6736.880004652987 5826.064905885335 6513.694753257033 6134.453351174142 5602.899478402124 6117.600999600297 5792.714573178677 1.0973710924962365 1.1519546449629472 1.0573555828083927 1.022778500831511 1.1629918787723408 1.005757289140583 1.1244632669140346 1.0589945825361011 0.9672320994969387 1.0560853503685308 1.0 12.500023864913565 -8.6362462329826 4.608467754823416 0.9846652129953589 1.0875246847410638 0.29623258437165645 0.051209070833010135 0.12270266727424647 4.454752919599289 0.007522306359763317 0.008525007989283462 2.3107542848090822e-09 8.6362462329826 0.10285947174570487 TFNS(ph)PNLK ddPTM_A549_MK2206_60min_R1 1 TFNSPNLK 8 0 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;A0A087WZ85;A0A087WTM1;Q9Y6N7-5 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 T(0.001)FNS(0.999)PNLK 100.48 0.0023704999999999998 17999000.0 4078.9 4087.5 3358.5 3665.3 4798.8 4094.0 4267.0 4313.1 6390.5 5656.5 5890.7 True False 4767.318600469468 4295.536290875904 3834.785801386019 4563.2986645415685 4092.9028769319207 4527.224362622743 5042.258667057368 4924.495133314774 4943.061953531515 4378.6927213901345 4427.876614950753 1.076660217760492 0.9701120117873202 0.8660552528581852 1.030583970911376 0.9243488996762486 1.0224368825762988 1.1387532005820014 1.1121572621710338 1.1163504278419223 0.9888922167807142 1.0 12.112399305905587 -7.520644120851958 24.867060176565015 1.0678344896037952 0.9708408987089031 0.3306724499495085 0.0661198637491059 78.43047958845622 872782.0530478451 0.010589125585512421 0.015856445287828494 3.0154760198033237e-08 7.520644120851958 -0.09699359089489212 TFNS(ph)PNLK ddPTM_A549_PD325901_60min_R1 1 TFNSPNLK 8 0 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;A0A087WZ85;A0A087WTM1;Q9Y6N7-5 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 T(0.189)FNS(0.811)PNLK 110.54 0.0015865 23919000.0 6336.1 5704.8 5063.9 5853.8 6983.3 6071.2 5808.5 6107.5 6237.0 5949.3 7047.2 True False 6979.336207609711 6185.563516997345 5407.566705704437 6215.37593105561 6492.817099077144 6021.758160099945 6029.545646033162 5985.681121258936 5974.880579751746 5573.660182686109 6180.439075881479 1.1292621967338607 1.0008291386830206 0.8749486305603923 1.0056528111911123 1.0505430147211852 0.9743253005436507 0.9755853220142299 0.9684880067206608 0.9667404704413473 0.9018226883647698 1.0 12.593493619570882 TFNS(ph)PNLKDGR ddPTM_A549_MK2206_60min_R1 2 TFNSPNLKDGR 11 1 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;A0A087WZ85;A0A087WTM1;Q9Y6N7-5 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 TFNS(1)PNLKDGR;T(0.019)FNS(0.981)PNLKDGR 73.156 0.00044747 66279000.0 6625.1 7486.700000000001 5982.0 6237.3 8953.400000000001 6644.0 5664.700000000001 6450.5 10641.0 9703.2 10637.6 True False 7743.254911856197 7867.74105171881 6830.337550659864 7765.438780003041 7636.366720497265 7347.06367006974 6693.902664935526 7364.8781288277505 8230.830490185253 7511.240380834925 7995.990337175569 0.968392229772423 0.9839608003450814 0.8542203357730107 0.9711666038288428 0.9550245058443463 0.9188434903317991 0.8371574229915866 0.9210714143295542 1.0293697394702752 0.9393758701674629 1.0 12.965061013308246 -8.756882075628763 24.9673151056857 1.0138690457853328 0.9249961108102095 0.20437438382821504 0.04968394525302514 74.8191861369272 409898.54024521477 0.007691700952425881 0.008579425379650929 1.750321890582764e-09 8.756882075628763 -0.08887293497512327 TFNS(ph)PNLKDGR ddPTM_A549_PD325901_60min_R1 2 TFNSPNLKDGR 11 1 A0A0A0MSX4;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;A0A087WZ85;A0A087WTM1;Q9Y6N7-5 A0A0A0MSX4 ROBO1 Roundabout homolog 1 1 T(0.003)FNS(0.997)PNLKDGR;T(0.024)FNS(0.976)PNLKDGR 74.649 0.00038752 48676700.0 4418.6 4673.75 5326.1 5238.5 5522.9 5786.3 4997.7 5654.6 5687.03 5474.6 5745.5 True False 4867.173019198604 5067.623315027053 5687.561174441121 5562.070247503301 5134.990556970655 5739.178291241654 5187.890208346375 5541.814567052113 5448.023906279555 5128.932821698919 5038.839923725316 0.9659312645122105 1.0057123051609975 1.1287441674146679 1.1038394415576414 1.0190818987506658 1.13898801670972 1.0295802777776801 1.0998195320630344 1.0812059896222543 1.0178796904321967 1.0 12.298875909472246 -4.475816863426735 12.919775404859205 1.0509200612390763 1.0619086412914365 0.0 0.0558747166628315 79476.30034213857 3239.1873118203007 0.007601280060046938 236458.60118598107 3.343359956291427e-05 4.475816863426735 0.010988580052360142 TFNT(ph)STGGLLLPSDTKR ddPTM_A549_MK2206_60min_R1 1 TFNTSTGGLLLPSDTKR 17 1 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 T(0.1)FNT(0.393)S(0.393)T(0.113)GGLLLPSDTKR 48.053000000000004 0.014268000000000001 4662000.0 852.82 1158.9 1072.7 1060.0 1520.6 1149.4 975.74 1038.1 1803.2 1449.4 1644.1 True False 996.7551665528384 1217.8830599378812 1224.824990069014 1319.700047585209 1296.92175432664 1271.0287450900298 1153.0193278168638 1185.2538540479168 1394.7780791186963 1121.9795333479824 1235.8245951483752 0.8065506791707494 0.9854821345351684 0.99109938002323 1.0678700300723207 1.0494383745218547 1.0284863645535618 0.9329959383745962 0.9590793537375853 1.1286213954588247 0.9078792716641763 1.0 10.271258275746387 -4.499495636435323 1.063986009548387 1.0427096006139518 1.597363500276847e-07 0.34854286717339955 0.06661198483691053 4.5138197925707075 1.242304890937745 0.009689685462778201 7.88914043953826 3.165952273111344e-05 4.499495636435323 -1.0427094408776019 TFNTS(ph)TGGLLLPSDTKR ddPTM_A549_MK2206_60min_R1 1 TFNTSTGGLLLPSDTKR 17 1 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 T(0.006)FNT(0.158)S(0.813)T(0.023)GGLLLPSDTKR 93.73 1.6662e-06 4685600.0 1919.7 2028.3 2368.4 1987.0 2743.6 2725.9 2321.7 2298.1 3482.5 3265.8 3283.8 True False 2243.698427841141 2131.5318064302373 2704.274733363895 2473.815089199819 2340.020074424943 3014.352928694025 2743.522837428427 2623.8627126360807 2693.71931040975 2528.053511803396 2468.3418317305727 0.9089901564679425 0.8635480625209048 1.0955835608344036 1.0022173822923905 0.9480129714385375 1.2212056247414647 1.1114841559464732 1.0630062169292294 1.091307239451986 1.0241910092456517 1.0 11.269326486602028 -5.757800993696468 24.999730800050163 1.0552331089883984 0.8862690530149314 0.4855336431664834 0.06944888705245295 60.40961509759428 415061.44281396305 0.009886807287059823 0.03548654756112336 1.7466223224853287e-06 5.757800993696468 -0.16896405597346698 TFNTST(ph)GGLLLPSDTK ddPTM_A549_PD325901_60min_R1 1 TFNTSTGGLLLPSDTK 16 0 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 T(0.146)FNT(0.278)S(0.278)T(0.297)GGLLLPS(0.001)DTK 45.723 0.039424 1116400.0 1623.7 1249.2 1147.4 1707.9 1809.5 1504.1 1190.4 1313.3 1547.1 1324.1 1866.3 True False 1788.5368286952353 1354.4744680677813 1225.2694638767102 1813.393104077672 1682.4069624361125 1491.8511082827663 1235.7013234118747 1287.1052012360815 1482.0807671851726 1240.4961000276799 1636.75693145045 1.092732093769282 0.82753550147943 0.7485958607127506 1.107918389855659 1.0278905377508978 0.9114677198652386 0.7549693541342326 0.7863752867052064 0.9054983905715263 0.7578987913180154 1.0 10.676624373225309 -10.399853577301242 1.0844930140567608 0.992929092386057 0.9035798752679607 0.0 0.13931090937940266 0.9891013712764345 2.2734484785865057 0.054553341346362215 0.022074812387898494 3.982414153031403e-11 10.399853577301242 -0.08934921711809629 TFPLAHS(ph)PQAECEDQLDAQER ddPTM_A549_MK2206_60min_R1 2 TFPLAHSPQAECEDQLDAQER 21 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 TFPLAHS(1)PQAECEDQLDAQER;TFPLAHS(1)PQAECEDQLDAQER 217.93 4.118799999999999e-68 16506000.0 2921.6000000000004 3932.5 2646.6000000000004 2432.3 4097.4 3736.0 2343.13 2758.5 5055.6 3608.8999999999996 4721.0 True False 3414.6946537379185 4132.647452934435 3021.9276766259463 3028.213609190098 3494.677887792957 4131.341040243908 2768.8463910340142 3149.5258225519483 3910.5146721342517 2793.646983510095 3548.645407028453 0.9622529901056804 1.1645704146008238 0.8515721719168422 0.8533435330541657 0.9847920789356389 1.1642022705512831 0.7802544558411028 0.8875290318705814 1.1019739150012227 0.787243204964067 1.0 11.793052707164739 -8.76799869265377 24.99930032455979 1.0481543458123235 0.9581428582608753 0.0 0.1407966724810195 266.59028202291717 1016043.5616350465 0.020630521243344753 0.02221342453132453 1.7060875247896243e-09 8.76799869265377 -0.09001148755144817 TFPLAHS(ph)PQAECEDQLDAQER ddPTM_A549_PD325901_60min_R1 1 TFPLAHSPQAECEDQLDAQER 21 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 TFPLAHS(1)PQAECEDQLDAQER 232.0 9.033999999999998e-77 18074000.0 3038.9 3343.2 3486.9 3752.3 3750.7 3141.3 2902.4 3679.3 3021.4 3390.3 3399.0 True False 3347.4068908800587 3624.9431969614184 3723.542002433062 3984.0710489084 3487.2637712125575 3115.7182942946956 3012.8524202542226 3605.913475144988 2894.4210652015286 3176.235879407782 2980.9445480362606 1.1229349747834827 1.2160384530968216 1.249114816606031 1.3365129691972846 1.1698519429050909 1.0452117589195744 1.0107039469214487 1.2096546638280925 0.9709744742176668 1.065513238580762 1.0 11.541553823017946 -7.229843258307923 2.8568205135831635 1.0085951842375556 1.233112142807599 0.5028763384189657 0.07951074522946655 0.1353291922806305 2.2052630440113825 0.012264809682348063 0.02177083186147479 5.890562139123922e-08 7.229843258307923 0.2245169585700435 TFQARPLS(ph)ADLTK ddPTM_A549_MK2206_60min_R1 2 TFQARPLSADLTK 13 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 TFQARPLS(0.9)ADLT(0.1)K;TFQARPLS(0.989)ADLT(0.011)K 84.65299999999999 0.00010047 43237000.0 4707.2 4618.4 4274.7 3773.3999999999996 5735.700000000001 3873.1 4118.5 3546.8999999999996 5801.4 6529.6 6025.5 True False 5501.660280009283 4853.456833218663 4880.916738182166 4697.883169394363 4891.986128035844 4282.948871244297 4866.778139272506 4049.6839369256872 4487.392162932126 5054.558824995853 4529.202054660019 1.2147085101554962 1.071592032028031 1.077654889156529 1.0372430094084213 1.0800988935794027 0.9456298967359259 1.0745332357749775 0.894127461758752 0.9907688172831954 1.1159932288283105 1.0 12.145041186327369 -2.0000000000000027 0.443551584573256 0.990536411775388 5.581761710097994 0.44927274644580917 0.06143147793573534 31.488773870067273 0.3398911380950027 0.008868909730857504 131.67476556363658 0.00999999999999994 2.0000000000000027 4.591225298322606 TFQARPLS(ph)ADLTK ddPTM_A549_PD325901_60min_R1 2 TFQARPLSADLTK 13 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 TFQARPLS(0.996)ADLT(0.004)K;TFQARPLS(0.91)ADLT(0.09)K 89.46799999999999 5.2375e-05 78220000.0 6383.9 6442.4 7044.6 6526.700000000001 7887.8 7355.599999999999 7347.799999999999 7723.6 6670.5 6835.5 7483.6 True False 7031.988828421209 6985.323657604768 7522.688918621118 6929.839435788836 7333.788139432751 7295.698432341411 7627.424549870435 7569.546738953019 6390.162082288605 6403.905363446274 6563.164642449009 1.071432641341946 1.0643224782790506 1.1461984162283743 1.0558685959161014 1.117416450594509 1.111612892529702 1.1621565152484583 1.1533379324350583 0.9736403747909257 0.9757343769844378 1.0 12.680175909423292 -8.769897966624686 24.999973993221175 0.9875523897634588 1.1101537716878145 0.7310645362877133 0.03432217465366339 69.29737513149672 204812.7016898748 0.006112629365736192 0.006558526386486245 1.6986426855964916e-09 8.769897966624686 0.12260138192435566 TFS(ph)ATVR ddPTM_A549_MK2206_60min_R1 6 TFSATVR 7 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 TFS(0.921)AT(0.079)VR;T(0.063)FS(0.87)AT(0.067)VR;T(0.002)FS(0.866)AT(0.132)VR;T(0.038)FS(0.918)AT(0.043)VR;T(0.01)FS(0.587)AT(0.403)VR;T(0.005)FS(0.985)AT(0.01)VR 114.99 0.0073128 6727328100.0 34038.9 36761.6 37400.99999999999 34319.3 49442.49999999999 37507.5 36169.0 35890.0 55752.8 53259.3 54500.5 True False 39783.83414879507 38632.608418511016 42705.02419462215 42727.53004065192 42169.57374608371 41476.51875453652 42740.43912088073 40977.51740851529 43124.87981892687 41227.987139809724 40966.52171272066 0.9711303885592426 0.9430287660110296 1.0424371513425719 1.0429865230023774 1.0293667117213294 1.012449117486523 1.0433016359211487 1.0002684068682164 1.0526859009740144 1.006382417060511 1.0 15.322157784673365 -5.760487733164425 24.99973663638644 1.0264857887940664 0.9570795615402575 0.6633061649666074 0.018803083492231393 11.532236800235697 302902.56238180236 0.0029393900735663783 0.010225342866210555 1.7358502920216818e-06 5.760487733164425 -0.06940622725380885 TFS(ph)ATVR ddPTM_A549_PD325901_60min_R1 7 TFSATVR 7 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.245)FS(0.731)AT(0.024)VR;TFS(0.89)AT(0.11)VR;T(0.015)FS(0.908)AT(0.078)VR;T(0.017)FS(0.91)AT(0.073)VR;T(0.042)FS(0.881)AT(0.077)VR;T(0.008)FS(0.992)ATVR;T(0.155)FS(0.791)AT(0.054)VR 130.28 0.0057089 10670596000.0 51020.9 50695.100000000006 51402.49999999999 52779.2 60917.6 58522.6 56390.3 56635.100000000006 60454.99999999999 56806.9 60812.7 True False 56200.504208398605 54967.35399146891 54890.98275834283 56039.25131373988 56638.95793031119 58046.01134870617 58536.263724456185 55505.468501123585 57914.28658792553 53220.10263927383 53333.12342346714 1.053763601320784 1.0306419437509016 1.0292099774938404 1.050740097645997 1.061984640963095 1.088366996393939 1.097559264618273 1.0407316305180165 1.0858971474084458 0.9978808519558113 1.0 15.702744200643563 -4.922312414338065 14.25499327305191 1.0484371374202803 1.1217705751685372 0.0023895094642979453 0.03197625509884443 13995200.35401804 53901840.141385935 0.005018572252638242 30591358.926560715 1.1958799528936031e-05 4.922312414338065 0.07333343774825685 TFS(ph)DGLATR ddPTM_A549_MK2206_60min_R1 1 TFSDGLATR 9 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 T(0.131)FS(0.869)DGLATR 66.595 0.0052967 1850600.0 778.95 757.45 673.86 574.03 1025.0 674.18 412.03 695.52 1122.6 936.01 1066.2 True False 910.4177165009415 796.000969669469 769.4234807568804 714.667375769186 874.2238578092899 745.5212801155345 486.8905175972926 794.1120899406675 868.3328924238297 724.5646909128227 801.4331143769832 1.1359871462370015 0.9932219612465888 0.9600595070931323 0.89173676873179 1.0908257247255033 0.9302351833753296 0.6075248312840065 0.9908650836794947 1.0834751856976272 0.9040862898160673 1.0 9.646438311423218 -8.521705152338908 24.99755311907945 1.039300493166874 0.9390443797919675 0.0031444354241726424 0.13457019523196329 76.93185141731725 1638666.5237353044 0.02204712428961338 0.0251627421410714 3.0081178563284254e-09 8.521705152338908 -0.10025611337490636 TFS(ph)DGLATR ddPTM_A549_PD325901_60min_R1 1 TFSDGLATR 9 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 T(0.084)FS(0.916)DGLATR 67.726 0.0047848 3158000.0 2293.7 2261.3 2206.5 2093.4 2319.2 2407.0 2263.6 1983.1 2483.6 2335.3 2055.3 True False 2526.554735467305 2451.867687033039 2356.246358762385 2222.7045635436507 2156.3073928056524 2387.3981900383055 2349.742536689449 1943.5455147881453 2379.222928951649 2187.848759455209 1802.5111296201624 1.4016860667039088 1.3602510668268182 1.3072021137860657 1.2331155835981076 1.1962796552940256 1.3244845764372033 1.303593913001027 1.0782432811927785 1.3199490920497203 1.2137782250011668 1.0 10.815792452088376 -14.067608742596994 0.2404686980150994 1.2625329597306006e-11 1.3187358514280378 0.24551343797302116 0.10082861592825695 13.88181795836981 0.2621597696590368 6.672563755717262 0.04751357471235545 8.558373925498684e-15 14.067608742596994 1.3187358514154126 TFS(ph)ESSVWSQQSSRPSLK ddPTM_A549_MK2206_60min_R1 1 TFSESSVWSQQSSRPSLK 18 1 A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439 A0A2R8Y6V8 ABCC4 Multidrug resistance-associated protein 4 1 T(0.092)FS(0.907)ES(0.001)SVWSQQSSRPSLK 118.05 1.1775e-10 8307400.0 3443.1 3995.0 2559.8 3367.1 3950.7 3200.9 2497.4 3197.3 3537.4 4606.0 3890.5 True False 4024.211104287041 4198.328435975349 2922.818131424125 4192.039651154863 3369.557263460644 3539.617113414543 2951.1452531307896 3650.5270663205893 2736.184548067036 3565.5014009940696 2924.3814776624004 1.3760896569156866 1.4356295401416903 0.9994654096087612 1.4334790734982235 1.1522290402940503 1.2103814568829543 1.009151943982966 1.2483074093461406 0.9356455609389923 1.219232657650447 1.0 11.513915803898392 -7.496160821074798 0.5040584988885656 0.9642346307095515 1.3519938040980188 0.21288868702639796 0.15359572981747352 0.5691038305961421 0.28259411500926696 0.033512484246459646 0.08930585444273118 3.190356233991475e-08 7.496160821074798 0.3877591733884673 TFS(ph)ESSVWSQQSSRPSLK ddPTM_A549_PD325901_60min_R1 3 TFSESSVWSQQSSRPSLK 18 1 A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439 A0A2R8Y6V8 ABCC4 Multidrug resistance-associated protein 4 1 T(0.008)FS(0.982)ES(0.008)S(0.002)VWSQQSSRPSLK;T(0.125)FS(0.875)ESSVWSQQSSRPSLK;T(0.014)FS(0.986)ESSVWSQQSSRPSLK 106.86 1.5963e-09 20876200.0 11372.8 11666.8 11086.2 12045.599999999999 12732.900000000001 12934.199999999999 11801.8 12329.2 13835.1 14062.6 14529.400000000001 True False 12527.358283787145 12650.00218063816 11838.576198736257 12789.629354457524 11838.585030120348 12828.868163520347 12250.923957192761 12083.28443392971 13253.658859856248 13174.68503606167 12742.375909455157 0.9831257822563166 0.9927506667929602 0.929071335115121 1.0037083700353953 0.9290720281871316 1.006787765066718 0.9614316862291179 0.9482756214218743 1.040124616793145 1.0339268853531254 1.0 13.637346683298105 -8.761484274656073 24.99999999997013 1.0189477361345758 0.9695163867335853 0.4488289394977364 0.02714143437525963 0.842044893700375 468658.3538596381 0.0045554464282928355 0.005002916450507633 1.7318717388590338e-09 8.761484274656073 -0.049431349400990476 TFS(ph)FLMNR ddPTM_A549_PD325901_60min_R1 1 TFSFLMNR 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 T(0.01)FS(0.99)FLMNR 58.246 0.005326399999999999 4416000.0 1514.4 1798.3 2031.8 1706.8 2411.5 1919.9 1879.8 2312.6 2012.0 1834.6 1673.7 True False 1668.1407731576444 1949.8490521343992 2169.6901662059436 1812.2251595759546 2242.1245592233668 1904.2649709408172 1951.3368176660304 2266.473378800396 1927.4426369184716 1718.7630429052049 1467.8455104584566 1.1364552749400916 1.3283748447923494 1.4781461337360209 1.2346157321487714 1.5274935565412993 1.2973197501868248 1.3293884157172395 1.5440816916028863 1.3131100127263855 1.1709427393134706 1.0 10.519484418358145 -10.27449862515641 0.7892167975492684 1.0084958161979138 1.3609961911233748 0.37981337535593096 0.126151635411555 0.3345718047117336 0.3964396175933551 0.06449899379774245 0.022658908077919475 5.314976820631972e-11 10.27449862515641 0.35250037492546094 TFS(ph)LDAVPPDHS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TFSLDAVPPDHSPR 14 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 2 T(0.148)FS(0.852)LDAVPPDHS(1)PR;T(0.427)FS(0.574)LDAVPPDHS(1)PR 57.36600000000001 0.0042646 2337800.0 0.0 122.65 145.58 365.49 270.78 149.3 212.48000000000002 504.29 363.19 495.47 426.98 True False 0.0 128.89236111949356 166.22543307005404 455.03506640746974 230.94862070009685 165.09882690268083 251.0848656143309 575.7746518233545 280.9280448952525 383.54298288114046 320.94908195149526 0.0 0.4015975379514341 0.5179183939687216 1.4177796167562766 0.7195802502248625 0.5144081606303895 0.78231993713033 1.7939750701962462 0.8753040924345405 1.1950275119936469 1.0 8.326200624060453 -5.816168481534813 2.1082643216886927 0.968240754290675 0.09756638336304828 0.46822668380006505 0.3491800429736123 0.22972314854276893 1.9306568009371237 0.04716530436750796 0.24835740732201667 1.5269735645053896e-06 5.816168481534813 -0.8706743709276268 TFS(ph)LDAVPPDHS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TFSLDAVPPDHSPR 14 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 2 T(0.118)FS(0.882)LDAVPPDHS(1)PR;T(0.478)FS(0.522)LDAVPPDHS(1)PR 80.316 0.00018274 6364300.0 2361.87 2079.69 1848.9299999999998 1949.12 2449.48 2225.63 2509.68 2045.8700000000001 2255.71 2515.5299999999997 2384.6 True False 2601.6453036832027 2254.952774972689 1974.4095083192983 2069.5127156273047 2277.436975047255 2207.505207185276 2605.1872457495906 2005.0635178960338 2160.910353142827 2356.6990064969646 2091.309317224852 1.244027022810553 1.0782492845032559 0.9441020953033009 0.989577533357681 1.0890005396568467 1.055561312237931 1.2457206709176096 0.9587599028902786 1.0332810815428943 1.1269012130755878 1.0 11.030190745644179 TFS(ph)LDAVPPDHSPR ddPTM_A549_MK2206_60min_R1 2 TFSLDAVPPDHSPR 14 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 T(0.117)FS(0.883)LDAVPPDHSPR;T(0.137)FS(0.863)LDAVPPDHSPR 106.36 5.9861e-06 49811000.0 4078.7 3917.7 4185.9 3759.2000000000003 5890.8 4181.4 4222.7 3994.9 6013.7 5994.9 6715.2 True False 4767.084845358996 4117.094196150347 4779.523562906573 4680.2041687569 5024.271123495575 4623.87297261132 4989.909930485858 4561.189308868148 4651.60655190556 4640.647926361126 5047.630509908379 0.9444203247447136 0.8156488847724864 0.9468845933798999 0.9272081543151326 0.9953722075403597 0.9160482257040737 0.9885648168364906 0.9036297922192683 0.9215426015780209 0.9193715580511775 1.0 12.301390592559292 TFS(ph)LDAVPPDHSPR ddPTM_A549_PD325901_60min_R1 2 TFSLDAVPPDHSPR 14 0 Q9BST9-3;Q9BST9-2;Q9BST9 Q9BST9-3 RTKN Rhotekin 1 T(0.112)FS(0.888)LDAVPPDHSPR;T(0.132)FS(0.868)LDAVPPDHSPR 116.35 1.1254e-06 85058000.0 4913.4 5070.700000000001 5662.6 5133.6 6120.4 5680.3 5695.7 5888.3 5639.9 5738.0 6804.5 True False 5412.204750946091 5498.025684623198 6046.898087980003 5450.690812748485 5690.524218233752 5634.041520097461 5912.452980306631 5770.8532372180125 5402.874616280561 5375.701700746791 5967.589637279418 0.9069331304445185 0.9213143025581279 1.0132898633319467 0.9133823107906288 0.9535716368104732 0.9441067269273531 0.9907606487168036 0.9670325186516853 0.905369662573463 0.9008162470094937 1.0 12.542932616398508 -5.779865515854375 0.005167559505395289 1.8726771190592446 3.201840834123101e-07 0.0 0.03995044165930872 29829.58633278841 26.58008204426206 4655.745033409641 4980.5335380184715 1.6601008966696508e-06 5.779865515854375 -1.8726767988751611 TFS(ph)LTEVR ddPTM_A549_MK2206_60min_R1 2 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.018)FS(0.982)LTEVR;T(0.188)FS(0.809)LT(0.003)EVR 189.72 6.9011e-10 154674000.0 7158.4 9894.099999999999 8865.7 11293.0 20546.0 19468.9 19513.1 19006.5 28271.0 26243.0 25277.0 True False 8366.562913923024 10397.66742888203 10122.98957253179 14059.785506962038 17523.71061712161 21529.086075590116 23058.37768834243 21700.729579965056 21867.66363951013 20314.688073444944 19000.02329028981 0.4403448767454331 0.5472449833361985 0.5327882717757122 0.7399878038121911 0.9222994282368756 1.133108404482473 1.2135973380688796 1.1421422620600405 1.1509282544240809 1.069192798507095 1.0 14.21371356656699 -6.654627836732475 1.5790861471272557 1.0944350207266715 0.4964623655148426 0.9489095389576803 0.06131961943897568 0.07723439108125418 0.38479768074537535 0.012079662406197851 0.032789356255810226 2.2149920064732728e-07 6.654627836732475 -0.597972655211829 down TFS(ph)LTEVR ddPTM_A549_PD325901_60min_R1 2 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.015)FS(0.6)LT(0.385)EVR;T(0.297)FS(0.668)LT(0.035)EVR 174.02 3.9211000000000005e-06 175998000.0 14231.599999999999 15418.5 16963.9 15592.0 17569.8 17010.8 15419.3 17353.4 16869.3 18601.7 20162.3 True False 15676.381555249813 16717.871106230457 18115.172266217625 16555.082427998746 16335.75786051947 16872.269684712763 16006.08989926472 17007.272823521052 16160.341985570962 17427.18548741402 17682.46491935027 0.8865495634658287 0.9454491318083013 1.0244709857387493 0.936242910901081 0.9238394044623794 0.9541808657145479 0.9051956258512884 0.9618157254144845 0.9139190751559971 0.9855631308700127 1.0 14.1100317786595 -10.952713424132462 1.1904602226868997 1.000305886534192 0.9388308000490366 0.2642059257586562 0.03439168897373336 0.4894939673246785 1.2229693941683282 0.024783325719767733 0.005652212798460702 1.1150300605590677e-11 10.952713424132462 -0.06147508648515543 TFS(ph)PSKPAK ddPTM_A549_MK2206_60min_R1 1 TFSPSKPAK 9 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 T(0.003)FS(0.864)PS(0.134)KPAK 47.288000000000004 0.009684100000000001 18243000.0 2537.3 3231.1 3587.9 3548.5 4081.2 3134.6 3507.0 3217.1 4238.3 4127.5 4225.4 True False 2965.534208970843 3395.54918885606 4096.718170847966 4417.882659298218 3480.860886332949 3466.301291420918 4144.176504656711 3673.1337769555453 3278.3318171743426 3195.0948833267526 3176.1165648926108 0.9336981651588445 1.0690883408968552 1.2898513285473456 1.3909699373541704 1.0959487207770795 1.0913646336963452 1.3047935804575332 1.156485822200842 1.0321824625114753 1.0059753217636656 1.0 11.633048145665175 -8.766424711416617 4.1817719376129165 1.0140660762937002 1.1755995677605755 0.24408960110826372 0.1205106540364382 0.21323659308288792 8.444760641724782 0.021653083563477483 0.023610648149961267 1.712281989388902e-09 8.766424711416617 0.16153349146687535 TFS(ph)PSKPAK ddPTM_A549_PD325901_60min_R1 2 TFSPSKPAK 9 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 T(0.099)FS(0.802)PS(0.099)KPAK;T(0.016)FS(0.972)PS(0.012)KPAK 61.353 0.0035275999999999997 27316000.0 5079.1 4791.4 5622.2 5532.0 6579.0 6082.700000000001 5658.8 6292.8 5707.8 6091.4 6207.799999999999 True False 5594.726492964198 5195.188093419759 6003.756301035066 5873.699075916442 6116.913736317863 6033.16450791276 5874.148730614178 6167.285167393898 5467.921015409172 5706.7879644351715 5444.279954486469 1.0276338725663345 0.9542470513733518 1.1027640663642855 1.0788752828693353 1.1235487130446142 1.1081657369476396 1.078957875003005 1.1328008880791705 1.0043423668731841 1.0482172136890897 1.0 12.41052553933735 -8.853716338157437 10.87460876831116 1.0019455353408102 1.0755647091971128 0.20151258896410307 0.049143739828301156 0.3468715251849568 38.43545309424297 0.008592990010915366 0.009142256965561422 1.4005017693777512e-09 8.853716338157437 0.07361917385630257 TFS(ph)PTYGLLR ddPTM_A549_MK2206_60min_R1 3 TFSPTYGLLR 10 0 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 T(0.015)FS(0.955)PT(0.03)YGLLR;TFS(0.981)PT(0.019)YGLLR;T(0.034)FS(0.612)PT(0.353)Y(0.001)GLLR 66.595 0.0049956 62169600.0 2313.4399999999996 2278.5 2321.39 2135.72 3138.83 2703.48 2084.57 2213.04 3606.9700000000003 3113.08 3738.3399999999997 True False 2703.8921138223727 2394.4659177396347 2650.598008479822 2658.9714958761147 2677.112264982958 2989.560459175216 2463.3093858888647 2526.745197150759 2789.9970541474977 2409.8330658720415 2810.007005064762 0.9622367876481704 0.8521209781412804 0.9432709611408011 0.9462508424653673 0.9527066160894709 1.0638978670824757 0.8766203719239815 0.8991953374481091 0.9928790387777688 0.8575897004984521 1.0 11.456358011606365 -4.994104224186866 0.11456746768666992 1.0385897797771935 0.7894718583356174 0.0 0.06973228889940071 46.232388713032634 0.7539141344567254 0.31227283444698817 1.8494797720762173 1.0136680913476232e-05 4.994104224186866 -0.24911792144157607 TFS(ph)PTYGLLR ddPTM_A549_PD325901_60min_R1 2 TFSPTYGLLR 10 0 O15061;H0YL34;A0A075B7B1;O15061-2 O15061 SYNM Synemin 1 T(0.029)FS(0.971)PTYGLLR;T(0.147)FS(0.825)PT(0.028)YGLLR 188.49 2.8911e-14 134246000.0 5751.299999999999 5229.0 5184.7 5213.2 5556.3 5288.1 4464.7 5175.5 5901.8 5470.6 5705.8 True False 6335.167742116711 5669.666181177096 5536.564920133843 5535.207523963774 5166.0446561944 5245.035466863965 4634.606601677581 5072.270592398796 5653.767870062349 5125.185382381564 5004.022772046281 1.2660149704966448 1.1330216586641584 1.1064228066791533 1.106151545689365 1.0323783267041098 1.0481637885750723 0.9261761612212578 1.0136385910819121 1.1298445525959047 1.0242130413578705 1.0 12.288872639522232 -4.495807892262611 0.7485086896435571 1.0472113273544805 1.7740243754497507 0.6522934273030411 0.050705002986091846 4.36585369778446 0.7641680283097236 0.009991793957221317 3.498086240685247 3.1929499263256895e-05 4.495807892262611 0.7268130480952701 TFS(ph)YIK ddPTM_A549_MK2206_60min_R1 2 TFSYIK 6 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 T(0.05)FS(0.95)Y(0.001)IK;T(0.002)FS(0.998)YIK 86.95299999999999 0.039055 47686000.0 4239.0 5590.0 5247.4 4443.9 6298.6 4000.1 3997.3 4658.9 6154.9 6037.3 5846.4 True False 4954.439566400273 5874.507123179526 5991.560224562452 5532.655699494254 5372.084283704966 4423.387926948515 4723.557668110716 5319.313342282858 4760.824977355627 4673.469736913046 4394.577527568556 1.1273983756844719 1.3367626549598703 1.3633984579804372 1.258973283503631 1.2224347505543376 1.0065558973983784 1.0748604703133269 1.2104265561167473 1.0833407642690307 1.0634628033286275 1.0 12.101508763300872 -7.435843587129745 0.43384015674904697 1.0224862131340662 1.3138522433023758 0.4739419545832819 0.08788105024325511 0.7223695010601621 0.2601067120475045 0.028188026712709972 0.08267280294953784 3.665695723536735e-08 7.435843587129745 0.29136603016830964 TFS(ph)YIK ddPTM_A549_PD325901_60min_R1 3 TFSYIK 6 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 T(0.085)FS(0.915)Y(0.001)IK;T(0.085)FS(0.914)YIK;T(0.229)FS(0.766)Y(0.005)IK 93.561 0.036233999999999995 66200000.0 18336.4 20048.3 17983.6 19867.1 24080.9 21690.4 20015.899999999998 21018.4 20484.699999999997 23703.0 25190.3 True False 20197.89782945577 21737.840600514974 19204.075240171846 21094.245645542196 22389.540658595048 21513.760573829197 20777.616027620752 20599.17152338417 19623.799296463123 22206.38853482072 22092.05279446832 0.914260798548932 0.9839665332484613 0.869275273730126 0.9548341135063751 1.013465831667812 0.9738235180759697 0.940501827554174 0.9324245109780855 0.8882741445094126 1.0051754240050081 1.0 14.431239859754687 -11.145080430377224 1.5399005942959345 0.9998086467595971 0.9356967195204453 0.2504209751789832 0.039810923013449614 0.47924382107472013 2.0467983429230814 0.030791602774829424 0.006671450854165117 7.160107943181767e-12 11.145080430377224 -0.06411192723915182 TFSAT(ph)VR ddPTM_A549_PD325901_60min_R1 1 TFSATVR 7 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.008)FS(0.487)AT(0.505)VR 89.698 0.013378 391480000.0 4490.8 4599.7 5254.0 5617.5 5986.3 5055.1 6026.7 5499.5 6256.3 5591.6 5943.3 True False 4946.70271004777 4987.3328616485505 5610.568034868601 5964.480216731851 5565.842939613869 5013.932941613065 6256.049366436779 5389.808158225711 5993.369467869301 5238.545421731572 5212.311777682826 0.9490419838712844 0.9568370186531145 1.0764068371525586 1.1443061104421133 1.0678261733008243 0.9619403357797696 1.2002446578930386 1.0340532930710051 1.1498486129572434 1.0050330151318017 1.0 12.347707666853642 -5.75611576921954 7.491667263479702 1.0760554803529256 0.9521515330883358 0.30632279354925707 0.06824422693286418 0.11201354581491134 38.902849516524604 0.009777434219171297 0.034802410104497604 1.7534130348925365e-06 5.75611576921954 -0.12390394726458986 TFSATVR ddPTM_A549_MK2206_60min_R1 1 TFSATVR 7 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 0 86.866 0.011323 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TFSVYS(ph)SSR ddPTM_A549_MK2206_60min_R1 1 TFSVYSSSR 9 0 Q9UID3;H0YCB7;H0YEE1;Q9UID3-2 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog 1 TFSVYS(0.899)S(0.098)S(0.002)R 74.306 0.0021631 12098000.0 2672.3 2277.8 2531.2 2443.8 2713.6 2168.2 1836.5 2122.8 2911.4 3091.8 2977.3 True False 3123.318908537731 2393.7302907295752 2890.16222136915 3042.531109706352 2314.433034684184 2397.6374848653236 2170.1682779589546 2423.7134008023477 2251.972548550452 2393.360232651642 2237.954240700236 1.395613391791457 1.0696064500320608 1.2914304362473668 1.359514441526012 1.0341735289279277 1.0713523276128847 0.9697107467576854 1.083004002818212 1.0062638938702473 1.0694410945162047 1.0 11.127964822589549 -6.822456043772527 7.779476752827283 1.013248578389612 1.2646346021749564 0.6556475451534189 0.08462357024610252 0.09762567970276563 10.804806944985524 0.0110796620688396 0.02106119497821753 1.5050258392052036e-07 6.822456043772527 0.25138602378534447 TFSWAS(ph)VTSK ddPTM_A549_PD325901_60min_R1 1 TFSWASVTSK 10 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 TFSWAS(0.999)VTSK 107.85 0.00025551 3871000.0 4255.0 3730.9 4264.9 3873.8 4651.3 4247.7 4133.1 4627.1 5259.3 5141.0 6059.3 True False 4686.964467634556 4045.3160365946883 4554.341760927117 4113.0758279618785 4324.608734113889 4213.108139520448 4290.387382219101 4534.808860610275 5038.269910708411 4816.396382631453 5314.044513067409 0.8819957108204791 0.7612499343291393 0.8570386924173936 0.77400101144198 0.8138073972620168 0.7928251502523695 0.8073676032763554 0.8533629798280823 0.9481045742690225 0.906352284175975 1.0 12.375594597268949 -8.760244594560863 1.6756657935263588 0.98129764705334 0.8091210942963167 0.6832297735755517 0.04024383660461326 0.08741466967046768 0.4811576419870799 0.00606646623166445 0.006521683009694293 1.7368223752464017e-09 8.760244594560863 -0.17217655275702326 TFVLAGS(ph)ADSPELGK ddPTM_A549_MK2206_60min_R1 1 TFVLAGSADSPELGK 15 0 O15061 O15061 SYNM Synemin 1 TFVLAGS(0.995)ADS(0.004)PELGK 73.91 0.00096205 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TFVLRS(ph)VLK ddPTM_A549_MK2206_60min_R1 1 TFVLRSVLK 9 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 T(0.004)FVLRS(0.996)VLK 47.288000000000004 0.009684100000000001 902950.0 341.98 642.04 564.93 316.1 449.4 221.2 387.96 273.48 573.25 629.13 680.27 True False 399.69786339173515 674.7170936254356 645.0455687887455 393.5445141902682 383.2938553165801 244.60723717932348 458.4473101644191 312.24662749737445 443.4097902921433 487.00909605023895 511.34018450312345 0.7816672256652922 1.3195072753397386 1.2614802989042324 0.7696334575634438 0.7495868052870365 0.4783649800905278 0.8965603018466051 0.6106436320876854 0.8671522476235873 0.9524170225805207 1.0 8.998139596799634 -6.26581827773695 24.91633702399243 0.8546118505402652 1.1407471703571765 0.32315386670189705 0.1971211884005222 352.9710316294694 2008444.5150111942 0.029291696647827097 0.07032691601272913 5.422277278166743e-07 6.26581827773695 0.2861353198169113 TFVLRS(ph)VLK ddPTM_A549_PD325901_60min_R1 2 TFVLRSVLK 9 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TFVLRS(1)VLK;TFVLRS(1)VLK 80.763 0.00045924 4255400.0 1720.0500000000002 1912.54 2040.3400000000001 2239.05 1992.04 2987.7 2567.3 2605.2 2724.4 1998.1100000000001 2260.5 True False 1894.6682097661144 2073.7164578597135 2178.8097419611354 2377.3510332485007 1852.125982564925 2963.369161768777 2665.000006380465 2553.237242260138 2609.9029423562074 1871.9489936004143 1982.472830490135 0.9557095464948631 1.0460251590671332 1.0990363693521383 1.1991846731441653 0.9342503736139557 1.4947842493438515 1.3442807212251104 1.2879052882802386 1.31648863087367 0.9442495073880052 1.0 10.953085378795254 -5.684015154772077 0.9925218250551052 1.192012246181917 0.9209273323180514 0.1774027781706098 0.1659451220825725 1.6253648404663688 1.8649443185815615 0.02688796686673267 0.3982654215846691 2.0700691121538107e-06 5.684015154772077 -0.2710849138638656 TFWS(ph)PELKK ddPTM_A549_MK2206_60min_R1 1 TFWSPELKK 9 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EPP6;O15083 X6RM00 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 1 T(0.004)FWS(0.996)PELKK 78.692 0.00075811 44853000.0 5347.1 4679.8 3139.2 2379.9 7231.5 5432.9 5226.1 4989.5 8244.1 7231.2 8018.7 True False 6249.55975595633 4917.981830958058 3584.3857637966294 2962.975606837771 6167.755929510125 6007.805871932852 6175.614722265883 5696.776904702898 6376.8245131224785 5597.666897713487 6027.435485138541 1.0368522021289928 0.8159327201566916 0.5946784121761931 0.49158147177906575 1.023280289721485 0.9967432893717256 1.0245841266144944 0.945141083425791 1.0579664483917586 0.9286979365461967 1.0 12.557328588636913 -6.801118627435366 24.897301256740043 1.018829176506591 0.7305532268381882 0.4702726777347861 0.13234211443633645 86.41514931346653 54222.15537399612 0.01882639571311383 0.03557892071316891 1.5808161807248828e-07 6.801118627435366 -0.28827594966840286 TFWS(ph)PELKK ddPTM_A549_PD325901_60min_R1 4 TFWSPELKK 9 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EPP6;O15083 X6RM00 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 1 TFWS(1)PELKK;T(0.001)FWS(0.999)PELKK;T(0.001)FWS(0.999)PELKK;TFWS(1)PELKK 88.596 0.00046598 124939700.0 9912.2 8966.5 8195.7 8626.3 8459.3 10118.1 9363.7 7760.400000000001 11908.5 10846.599999999999 11945.0 True False 10918.479247024034 9722.138422934488 8751.909486747734 9159.126959251256 7865.147951000721 10035.70154824537 9720.04072751325 7605.612734083969 11408.027157924274 10161.743824907666 10475.84072559375 1.0422532695012119 0.9280532873301637 0.8354374332329965 0.8743094897266237 0.7507891879059606 0.9579853122171791 0.9278530460821163 0.7260145446372179 1.0889844029465892 0.9700170221260898 1.0 13.35477840981997 -8.789070135070311 24.999688390606998 1.0420204300061244 0.8800837465892676 0.3156269563035101 0.08974080976681659 150.11968335326026 135824.2247365006 0.015185119134774095 0.01616631239237081 1.625286263879557e-09 8.789070135070311 -0.16193668341685685 TGAAPIIDVVR ddPTM_A549_MK2206_60min_R1 3 TGAAPIIDVVR 11 0 E9PLL6;P46776;E9PLX7;E9PJD9 E9PLL6 RPL27A 60S ribosomal protein L27a 0 ;; 121.83 2.6512e-05 9927900.0 2919.8999999999996 3185.74 3516.9399999999996 2940.57 4128.04 3364.51 3651.8900000000003 2943.88 4575.01 4445.13 4553.87 False True 3412.707735298928 3347.8805586042818 4015.694975830441 3661.0097820072015 3520.810784381523 3720.540215019016 4315.391142170174 3361.184005254389 3538.777539789724 3440.9720457231365 3423.0183985817966 0.9969878446206598 0.9780492444888274 1.1731444322631155 1.0695267613881385 1.0285690505900416 1.0869179717411064 1.2606976182068141 0.981935711080891 1.0338178553921555 1.0052449753553117 1.0 11.741053331456634 TGAAPIIDVVR ddPTM_A549_PD325901_60min_R1 2 TGAAPIIDVVR 11 0 E9PLL6;P46776;E9PLX7;E9PJD9 E9PLL6 RPL27A 60S ribosomal protein L27a 0 ; 112.36 0.0001338 24532000.0 2491.79 2217.83 2100.87 2701.92 2897.3 2421.5299999999997 2595.71 2822.5 2786.48 2695.36 2363.67 False True 2744.7546864411547 2404.734317575061 2243.447671757594 2868.8114618944574 2693.8036431423866 2401.8098625357134 2694.4911644770127 2766.203023291584 2669.3739358452226 2525.1745096069835 2072.95357453865 1.3240791883397671 1.1600521821190573 1.0822469443180311 1.3839246074446847 1.2995002281910297 1.158641414856699 1.2998318908693793 1.3344259404879442 1.2877152525904059 1.2181529488276062 1.0 11.017472091156272 -10.690644892075431 0.9168314950963506 0.9975264587366686 1.2565782207451877 0.12210967174917653 0.10619688111864471 0.3633730393540073 0.5354590499299633 0.06275864324063539 0.015903979126740637 2.0387083793346033e-11 10.690644892075431 0.2590517620085191 TGADTTAAGPLFQQRPYPS(ph)PGAVLR ddPTM_A549_MK2206_60min_R1 2 TGADTTAAGPLFQQRPYPSPGAVLR 25 1 H7C053;O60828-5;O60828-4;O60828-2;O60828 H7C053 PQBP1 Polyglutamine-binding protein 1 1 TGADTTAAGPLFQQRPYPS(1)PGAVLR;TGADTTAAGPLFQQRPYPS(1)PGAVLR 167.87 3.2707999999999996e-48 55337000.0 5322.7 5485.9 4664.299999999999 4625.1 7565.6 6055.1 5089.5 5498.5 8325.400000000001 6950.6 7536.8 True False 6221.041632479061 5765.108877826579 5325.767876553461 5758.249707628625 6452.710262089714 6695.846662949917 6014.196270444925 6277.9292134500265 6439.710192931897 5380.454632598655 5665.204554901935 1.0981142114447 1.0176347247405568 0.9400839501806216 1.016423970542455 1.1390074620529587 1.1819249592949292 1.06160266803447 1.108155787246538 1.1367127401180608 0.9497370448774185 1.0 12.467912333384795 -6.641813539242442 10.130418769479201 1.0823756940363731 1.01186479949653 0.16127992346465436 0.07017602903729807 0.42566876267411996 35.79481262507032 0.010152855687986587 0.021145833821023582 2.2813213282835619e-07 6.641813539242442 -0.07051089453984316 TGADTTAAGPLFQQRPYPS(ph)PGAVLR ddPTM_A549_PD325901_60min_R1 2 TGADTTAAGPLFQQRPYPSPGAVLR 25 1 H7C053;O60828-5;O60828-4;O60828-2;O60828 H7C053 PQBP1 Polyglutamine-binding protein 1 1 TGADTTAAGPLFQQRPYPS(1)PGAVLR;TGADTTAAGPLFQQRPYPS(1)PGAVLR 232.37 4.068999999999999e-96 91509000.0 9313.8 9835.1 11928.7 10637.8 10804.7 12241.400000000001 10700.7 11736.2 11520.099999999999 12102.900000000001 11924.1 True False 10259.330119542827 10663.938393286457 12738.253315100323 11294.872745803306 10045.81514619146 12141.710097023237 11107.920994147718 11502.112284129209 11035.950259226885 11338.720828506166 10457.511293097728 0.9810489161330662 1.0197396009818298 1.2180960611066185 1.0800727275578714 0.9606315369529651 1.1610515883484753 1.0621954576782795 1.0998900179740612 1.0553132528301399 1.0842657024898517 1.0 13.35225193550293 -9.961104327275104 0.8000329265013073 1.004499646008692 1.074537761610207 0.0 0.07395208792309305 0.8763071981090855 1.141628783728208 0.03024718114073928 0.014217636010067388 1.0936936049790152e-10 9.961104327275104 0.07003811560151507 TGAIVDVPVGEELLGR ddPTM_A549_MK2206_60min_R1 2 TGAIVDVPVGEELLGR 16 0 P25705-2;P25705;K7EK77;K7EJP1;K7ERX7;K7EQH4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ; 156.81 8.4878e-20 5400300.0 1954.65 2115.9 1941.01 1741.37 2756.3 2468.7 2278.2 1835.4 3423.2 2514.8 3165.3999999999996 False True 2284.547133395681 2223.590272260386 2216.2744047486294 2168.00572817307 2350.8519212485303 2729.9361954095652 2692.1194505015474 2095.5735706767628 2647.8506657271105 1946.7049333955465 2379.3438194043338 0.9601584751074836 0.9345392852122816 0.931464543574653 0.9111779939041462 0.9880253127255327 1.1473483458531866 1.1314545752263399 0.8807359212177194 1.112849115849931 0.8181688234880246 1.0 11.216348043482515 -7.007974147091803 12.081428089756805 1.0531514536351922 0.9360535854012225 0.06089526662612277 0.0988849193679019 0.40209851433872346 604.7824154466714 0.010613440082024432 0.01927420098471081 9.818063867625699e-08 7.007974147091803 -0.11709786823396973 TGAIVDVPVGEELLGR ddPTM_A549_PD325901_60min_R1 2 TGAIVDVPVGEELLGR 16 0 P25705-2;P25705;K7EK77;K7EJP1;K7ERX7;K7EQH4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ; 128.54 1.5133e-09 7870700.0 2816.8999999999996 2474.5 2512.1000000000004 2911.7 2996.6 2930.3 2993.6000000000004 3084.8999999999996 3099.7 2908.9 3516.6 False True 3102.8696143078228 2683.0347992585052 2682.5862124844725 3091.5490960495126 2786.1291537087877 2906.43660833787 3107.523086160777 3023.3692494427646 2969.430388497112 2725.2315575640214 3084.080493564082 1.0060922925918925 0.8699626371158319 0.8698171847597832 1.002421662632028 0.9033905436394851 0.9423997247812037 1.0076011610739781 0.9803146369726695 0.9628251904234587 0.8836447567601061 1.0 11.590624704308764 -7.601639507610919 6.015859877864712 0.9834192384430349 0.9271685290750574 0.06026504478474548 0.052466624699911785 0.2030011793269427 12.08219338010061 0.006371130599852685 0.009493832937270593 2.5024216709879684e-08 7.601639507610919 -0.05625070936797749 TGASSLLNKSS(ph)PVK ddPTM_A549_MK2206_60min_R1 1 TGASSLLNKSSPVK 14 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 TGASSLLNKS(0.147)S(0.853)PVK 88.19 2.1571e-05 31151000.0 9259.8 9237.8 10969.0 9534.3 13836.0 10449.0 8998.1 9562.5 16291.0 13165.0 13234.0 True False 10822.627859625669 9707.964562165978 12524.569139616857 11870.203928010993 11800.742728438365 11554.706244515148 10632.938296707029 10918.013658928041 12601.114511381267 10191.017356510412 9947.632560181013 1.0879601547555284 0.9759070314906491 1.2590502377169581 1.1932692383035703 1.1862865518048076 1.1615533821350645 1.0688913399625555 1.0975489487449837 1.2667450707640502 1.024466604979323 1.0 13.280137503777533 -5.7383613294646985 24.991816103918207 1.1401460211571692 1.0319336198610287 0.1887360993038768 0.08621707028095398 359.5548871024105 389365.25683117687 0.01426777000070215 0.055184794789088686 1.826579884221477e-06 5.7383613294646985 -0.10821240129614051 TGASSLLNKSS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 TGASSLLNKSSPVK 14 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 TGASSLLNKS(0.082)S(0.918)PVK;TGASSLLNKS(0.105)S(0.895)PVK 147.92 8.6429e-14 103753000.0 26233.0 25205.0 26947.0 25279.0 34491.0 28443.0 29152.0 29921.0 31442.0 29939.0 31459.0 True False 28896.154848286085 27329.11380695519 28775.785465474728 26840.42641722554 32068.471147490436 28211.36963824658 30261.39531258651 29324.202182429573 30120.602082500307 28048.646430578294 27589.742435031723 1.0473513812726125 0.9905534229364314 1.0429885503003842 0.972840775169588 1.16233311068435 1.0225310984572857 1.0968350061203358 1.062866108717113 1.0917319055597654 1.016633138081198 1.0 14.751844367975433 TGDEKDVS(ph)V ddPTM_A549_MK2206_60min_R1 2 TGDEKDVSV 9 1 K7EL68;Q16543 K7EL68 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 1 T(0.001)GDEKDVS(0.999)V;TGDEKDVS(1)V 57.836000000000006 0.010509000000000001 71985000.0 9933.2 11200.9 9541.5 8898.6 13310.5 10482.2 9778.8 9979.7 14164.8 13214.7 14420.0 True False 11609.681316576356 11770.977967087943 10894.628174460237 11078.757399473328 11352.543082312732 11591.419446478772 11555.48138116255 11394.353036549459 10956.495416537557 10229.490091992258 10839.11602824619 1.0710911559874543 1.085972134297056 1.0051214643398396 1.022108940489487 1.047367982105605 1.069406344232511 1.066090754176775 1.0512253035078092 1.0108292399477488 0.9437568585237692 1.0 13.40395948368893 -8.798403670773848 4.185223357344082 1.0046837800741373 1.0518740926257129 0.49714364211797535 0.028403338315971513 0.1383775762965237 5.146078395403933 0.004075549537680076 0.004384175276638068 1.5907294784197154e-09 8.798403670773848 0.047190312551575575 TGDEKDVS(ph)V ddPTM_A549_PD325901_60min_R1 2 TGDEKDVSV 9 1 K7EL68;Q16543 K7EL68 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 1 TGDEKDVS(1)V;TGDEKDVS(1)V 61.435 0.0063414 115194000.0 32294.0 35567.0 33337.0 33552.0 38876.0 37527.0 34013.0 36508.0 35635.0 36871.0 37476.0 True False 35572.463106413736 38564.35591239736 35599.449291666264 35624.4308378793 36145.483874919184 37221.392554037186 35307.38332762776 35779.819300028066 34137.384874050564 34542.958767555785 32866.68957993731 1.0823257091315976 1.1733568669458594 1.0831467892463713 1.083906876329443 1.0997604059577493 1.1324959413240725 1.0742604070834172 1.0886347167093156 1.038662101670529 1.0510020695434357 1.0 15.004338531218004 -8.854338054512604 0.6977627085399584 1.0064803772500353 1.1117149131502764 0.527433130149829 0.029950665102082552 0.22317032680654067 0.23188300918222088 0.00747249761535174 0.007124226423189887 1.398498308705344e-09 8.854338054512604 0.10523453590024112 TGDIPRS(ph)PGD ddPTM_A549_PD325901_60min_R1 2 TGDIPRSPGD 10 1 V9GYR5 V9GYR5 USF2 1 TGDIPRS(1)PGD;TGDIPRS(1)PGD 67.08 0.0039529000000000005 5845600.0 1295.9 1281.62 1461.91 1280.49 1570.6100000000001 1866.23 1539.33 1528.5700000000002 1856.5 1357.79 1686.01 True False 1427.4588140088424 1389.6266152457817 1561.1240037789792 1359.582959096211 1460.2957719103508 1851.0320416265843 1597.9100455036971 1498.0814722100336 1778.4777611526556 1272.0589076781087 1478.6414584979757 0.9653853581644293 0.9397995756573629 1.0557826542783335 0.9194811570326819 0.9875928769058994 1.251846437138918 1.0806609244724383 1.0131472126662844 1.2027782333110406 0.860288949946178 1.0 10.53005655430307 -7.033898014461657 24.948664618996183 1.100404394772586 0.9715001205091945 0.13259386285961006 0.10444964759851516 550.5558819527186 405203.9696658449 0.013263336075475881 0.022981803672073104 9.249153466604392e-08 7.033898014461657 -0.12890427426339135 TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGK ddPTM_A549_MK2206_60min_R1 2 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 2 TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK 173.04 1.3149999999999999e-48 191200000.0 61048.0 71877.0 67394.0 59264.0 92269.0 69138.0 66609.0 71132.0 101926.0 97119.0 97096.0 True False 71351.40991969887 75535.23228851077 76951.48259598306 73783.68266046193 78696.3523280052 76454.13726990984 78710.99309913864 81215.17883261372 78839.923742376 75179.7504479251 72984.38348672622 0.9776257126659932 1.0349506110748812 1.0543554513956859 1.0109516465790394 1.0782628908870324 1.0475410439524322 1.0784634923093366 1.1127747464960698 1.0802300434135303 1.0300799548659358 1.0 16.155300182220888 -5.253100251347828 2.635120807161195 1.0486886490847143 0.9622296352054275 0.3178274312518087 0.03168888049218762 0.6040909445566134 5.311013160750902 0.005456184679109064 0.11553720971733326 5.583412938859425e-06 5.253100251347828 -0.08645901387928678 TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGK ddPTM_A549_PD325901_60min_R1 6 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 2 TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(0.987)PS(0.984)PEPIY(0.022)NS(0.007)EGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIY(0.001)NSEGK;T(0.002)GDLGIPPNPEDRS(0.997)PS(0.954)PEPIY(0.028)NS(0.019)EGK;TGDLGIPPNPEDRS(0.984)PS(0.973)PEPIY(0.019)NS(0.024)EGK 200.39 9.946599999999998e-69 990054500.0 179896.5 187279.69999999998 185827.3 186417.7 219327.09999999998 179159.7 191187.7 193360.0 198386.4 207578.69999999998 218582.50000000003 True False 198159.46024719588 203062.41757716428 198438.65804833217 197932.2979436856 203922.32113341874 177700.6828034092 198463.4525454234 189503.28311201403 190048.9095152898 194472.1454563972 191698.2382086307 1.0337051717268952 1.0592816056878187 1.0351616159996508 1.0325201722942816 1.0637673201330322 0.9269813038657791 1.0352909572879325 0.9885499464307657 0.991396224040693 1.014470176010421 1.0 17.54847755249999 -7.196798908887294 24.99999794538742 0.9941962587439428 1.0444595177831293 0.49212360969354985 0.0263339124462121 123.03755247165536 47585.19285432227 0.0033346494677327066 0.005775781928403767 6.356251768677257e-08 7.196798908887294 0.05026325903918649 TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGKR ddPTM_A549_MK2206_60min_R1 2 TGDLGIPPNPEDRSPSPEPIYNSEGKR 27 2 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 2 TGDLGIPPNPEDRS(0.991)PS(0.953)PEPIY(0.035)NS(0.021)EGKR;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGKR 116.13 7.7032e-18 29754000.0 9151.1 9507.4 9490.900000000001 8503.7 15149.0 9854.5 9124.2 8329.2 16753.9 15749.1 17542.9 True False 10695.581957085522 9991.286050611277 10836.852333593733 10587.106881745602 12920.60216775896 10897.296649112317 10781.9490344422 9509.8896071052 12959.168400480667 12191.367371775008 13186.51377059086 0.8111000483645099 0.7576897294032544 0.821813295168474 0.8028738350357189 0.9798345789146372 0.8263970931737806 0.8176497004453576 0.7211830035255089 0.9827592513028555 0.9245330178901969 1.0 13.686775577143026 -8.836070700529186 9.1845113828434 0.9921700084482314 0.8208162781742475 0.522790914692227 0.06350114494707305 0.1450726459401212 16.51341323157207 0.010587670331175662 0.011260693154199874 1.458576793418782e-09 8.836070700529186 -0.17135373027398393 TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGKR ddPTM_A549_PD325901_60min_R1 4 TGDLGIPPNPEDRSPSPEPIYNSEGKR 27 2 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 2 TGDLGIPPNPEDRS(0.999)PS(0.998)PEPIYNS(0.003)EGKR;T(0.001)GDLGIPPNPEDRS(0.889)PS(0.625)PEPIY(0.032)NS(0.453)EGKR;TGDLGIPPNPEDRS(0.983)PS(0.989)PEPIY(0.001)NS(0.027)EGKR;T(0.006)GDLGIPPNPEDRS(0.986)PS(0.981)PEPIY(0.012)NS(0.015)EGKR 99.603 1.6848e-10 101190000.0 28058.4 26910.5 28479.300000000003 29686.699999999997 34672.5 34251.1 32573.699999999997 35986.0 33504.0 32892.2 36582.1 True False 30906.868112497632 29178.34227740798 30412.07655794314 31520.38003561252 32237.22321363143 33972.17039751602 33813.30997851256 35268.230999529114 32095.943393298472 30815.380878582022 32082.733613038366 0.9633489616339032 0.9094718246063033 0.9479265989224722 0.9824717686401477 1.004815350289549 1.0588926369949283 1.0539410508576765 1.0992900862162247 1.0004117411072084 0.9604973581820567 1.0 14.969509451577778 -6.4515185587194495 2.1220727555129675 1.0167984148665805 0.9354511777797612 0.49654156581999565 0.037267553574868856 0.2273318612550594 1.9985496618626388 0.00560767777036215 0.015415761872457428 3.535749114499854e-07 6.4515185587194495 -0.08134723708681935 TGDLGIPPNPEDRS(ph)PSPEPIYNS(ph)EGKR ddPTM_A549_PD325901_60min_R1 1 TGDLGIPPNPEDRSPSPEPIYNSEGKR 27 2 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 2 T(0.086)GDLGIPPNPEDRS(0.747)PS(0.398)PEPIY(0.035)NS(0.734)EGKR 59.016999999999996 0.0012626 11829000.0 2270.6 2216.2 1981.9 2503.2 2217.4 1997.5 2097.2 2140.9 2151.8 2170.9 2385.8 True False 2501.1096404726263 2402.966951754576 2116.403652132867 2657.816978820325 2061.6574736147186 1981.2330222690134 2177.0100936318736 2098.198069996442 2061.367329086069 2033.829003511888 2092.361724832278 1.1953524148283268 1.1484471940181356 1.011490330288142 1.2702473703648796 0.9853255530087559 0.9468883887310773 1.0404558962224282 1.0027893576406497 0.9851868845724112 0.9720255247332619 1.0 11.030916569091094 -6.796699822143911 24.992759860175934 0.9932667866172947 1.145467868318997 0.6286990787359859 0.06113368160122801 82.52261799809249 58492.16535054381 0.007958507861352708 0.015040578767616063 1.5969825763484917e-07 6.796699822143911 0.1522010817017022 TGDLGIPPNPEDRS(ph)PSPEPIYNSEGK ddPTM_A549_MK2206_60min_R1 2 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 1 TGDLGIPPNPEDRS(0.621)PS(0.379)PEPIYNSEGK;TGDLGIPPNPEDRS(0.5)PS(0.5)PEPIYNSEGK 230.36 4.901199999999999e-96 44939000.0 18586.4 21586.5 21019.4 18685.7 29126.0 21618.0 21368.4 20792.1 31245.0 30079.0 32218.0 True False 21723.329926148162 22685.160646603734 24000.266986349034 23263.69733883295 24841.603982978882 23905.602411132993 25250.761682950262 23739.443848135703 24168.05738801226 23284.133009227247 24217.381428435212 0.8970139893259219 0.9367305343742739 0.9910347680351911 0.9606198509768492 1.025775807198161 0.9871258162975399 1.0426710153436196 0.9802646879179789 0.9979632793673954 0.9614636940841104 1.0 14.563755257610348 -5.300639767547048 0.99087964955548 1.0008129311338245 0.8429668968262923 0.6352261373212846 0.023317948143391446 0.6246188078082507 0.48645318639353213 0.002678448106282119 0.1030863859860641 5.004494686235143e-06 5.300639767547048 -0.1578460343075322 TGDLGIPPNPEDRS(ph)PSPEPIYNSEGK ddPTM_A549_PD325901_60min_R1 3 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 1 TGDLGIPPNPEDRS(0.5)PS(0.5)PEPIYNSEGK;TGDLGIPPNPEDRS(0.5)PS(0.5)PEPIYNSEGK;TGDLGIPPNPEDRS(0.5)PS(0.5)PEPIYNSEGK 229.48 5.899099999999998e-96 48664000.0 14586.7 15924.800000000001 16959.2 16205.3 19381.7 17257.800000000003 17879.6 19343.6 17952.3 18175.1 19662.3 True False 16067.531045839016 17266.83878409045 18110.153295954246 17206.264576093396 18020.396255235137 17117.25819860535 18560.01796209253 18957.776723239356 17197.82726180491 17027.52108421803 17243.961749589125 0.931777237688541 1.0013266692905922 1.0502315859280864 0.9978138913758244 1.0450264571982428 0.9926522945931032 1.0763198290285445 1.0993863822326715 0.9973246004338118 0.987448321417423 1.0 14.07380364700804 -5.289294333773203 3.916020127820554 1.0160243515752627 0.9259667607334814 0.3277052355989504 0.03684299987488278 0.2186037470711645 6.592325471983489 0.005304543125563662 0.053091108654986466 5.136953875469834e-06 5.289294333773203 -0.09005759084178133 TGDLGIPPNPEDRS(ph)PSPEPIYNSEGKR ddPTM_A549_MK2206_60min_R1 2 TGDLGIPPNPEDRSPSPEPIYNSEGKR 27 2 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 1 TGDLGIPPNPEDRS(0.866)PS(0.132)PEPIY(0.001)NS(0.001)EGKR;T(0.001)GDLGIPPNPEDRS(0.854)PS(0.144)PEPIYNS(0.001)EGKR 56.163999999999994 0.00083748 9074400.0 2469.8 2498.8 2185.4 2098.5 3190.6000000000004 2504.8 2718.0 2123.84 3559.6 4001.5 4204.1 True False 2886.6418591874 2625.9782467622535 2495.3225816135187 2612.632594205246 2721.266966562262 2769.8562734483244 3211.8254176381356 2424.9008239872155 2753.35628351315 3097.5583708375525 3160.1059427427062 0.9134636342862725 0.8309779147730488 0.7896325714472054 0.8267547485884921 0.8611315620008712 0.8765074094460017 1.0163663737331987 0.767347952228021 0.8712860686953642 0.9802071281664476 1.0 11.62575721031366 -12.109827552322555 0.27672648333701183 1.1734746047684257 0.8441754919795387 0.37537170525021246 0.06324213711043172 7.0385555093576775 0.3615986485892667 0.8061098785244751 0.03108538616048227 7.765554065060505e-13 12.109827552322555 -0.329299112788887 TGDLGIPPNPEDRS(ph)PSPEPIYNSEGKR ddPTM_A549_PD325901_60min_R1 1 TGDLGIPPNPEDRSPSPEPIYNSEGKR 27 2 Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5 Q15637-4 SF1 Splicing factor 1 1 TGDLGIPPNPEDRS(0.971)PS(0.029)PEPIYNSEGKR 85.866 1.2106e-07 7366800.0 1400.4 1698.8 1451.8 2119.3 2141.7 1924.3 1751.6 2036.2 2294.6 2001.3 2391.3 True False 1542.5675770800071 1841.9638379391195 1550.3278783826102 2250.2043477204825 1991.2743804638963 1908.6291387996307 1818.2580965122968 1995.5863936320013 2198.1659416864445 1874.9375764560045 2097.1852596996514 0.735541874493685 0.878302872585952 0.7392422158282004 1.0729640299125247 0.9494985582480571 0.9100908610586816 0.8669992734798732 0.9515546537447052 1.0481505777898015 0.8940257269996852 1.0 11.034238595521732 -3.3404714985351305 0.2797551826026431 1.023570232789212 2.1078395040088563e-16 0.3126375576187126 0.08645389223777769 13.187608649977767 0.31792539847539714 0.030843096568908292 5.759417211682131 0.00045659221401821496 3.3404714985351305 -1.0235702327892118 TGEADREVSEIS(ph)IVDIANKR ddPTM_A549_PD325901_60min_R1 1 TGEADREVSEISIVDIANKR 20 2 Q14789;Q14789-2;E7EU81;Q14789-4;Q14789-3;H0Y867 Q14789 GOLGB1 Golgin subfamily B member 1 1 T(0.001)GEADREVS(0.09)EIS(0.909)IVDIANKR 42.106 0.015263999999999998 2349300.0 732.67 510.81 580.28 613.78 838.01 479.86 545.29 723.74 690.42 506.55 655.96 True False 807.0501190368531 553.8577513878512 619.661290307109 651.6917966044819 779.1510685775554 475.9521792570757 566.0413093441376 709.304437936954 661.4040484002243 474.5663465516364 575.2810784730409 1.4028796517677808 0.9627602438410571 1.0771452660182492 1.1328232771608908 1.3543832706016392 0.8273384908128523 0.9839386875830711 1.2329702200872816 1.1497058970821328 0.8249295245574042 1.0 9.16812320920245 -12.749953002969818 0.014799091537401329 8.227501989883312e-05 2.046161784523484 0.13817803694633024 0.1698998433386792 6491.644120791421 11.49381012875697 913.396489366497 689.3140028645328 1.778471856355212e-13 12.749953002969818 2.0460795095035853 TGEDEDEEDNDALLKENES(ph)PDVR ddPTM_A549_MK2206_60min_R1 2 TGEDEDEEDNDALLKENESPDVR 23 1 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 TGEDEDEEDNDALLKENES(1)PDVR;TGEDEDEEDNDALLKENES(1)PDVR 151.65 2.8532999999999997e-28 23989000.0 1296.3899999999999 1243.19 1233.1999999999998 1189.42 2270.74 1835.38 1787.12 2345.54 2390.0 1744.66 1829.1 True False 1515.188938307536 1306.463060906182 1408.086303489426 1480.8279533950922 1936.7171540310878 2029.5986933733595 2111.816571144028 2678.0274779149895 1848.6688160457447 1350.5400942810056 1374.883989408122 1.1020485728107245 0.9502351259967796 1.0241491750119203 1.0770566570002595 1.4086404154468561 1.4761963256602382 1.5359961912518525 1.9478206878151674 1.3445998573607536 0.9822938551072979 1.0 10.425094176051008 -6.63058434210002 5.915636693835311 1.2933165457701354 1.0233421750590126 0.2536806231487265 0.25785309542212775 0.32431846317004626 15.83908294993723 0.04350337059712282 0.09139823982582984 2.3410767825249797e-07 6.63058434210002 -0.26997437071112285 TGEDEDEEDNDALLKENES(ph)PDVR ddPTM_A549_PD325901_60min_R1 2 TGEDEDEEDNDALLKENESPDVR 23 1 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 TGEDEDEEDNDALLKENES(1)PDVR;TGEDEDEEDNDALLKENES(1)PDVR 140.09 7.1341e-24 28237000.0 2164.89 1565.19 2022.66 1965.09 2351.3 1552.91 1336.05 1368.18 2317.91 2257.8 1485.58 True False 2384.6680390922156 1697.0940543347822 2159.929870842657 2086.469146256802 2186.152799544641 1540.2636158256696 1386.894113864612 1340.8905765835539 2220.496303449153 2115.2421226814404 1302.8630778675226 1.8303289728613314 1.3025881868665141 1.6578333575758006 1.6014492863454666 1.6779605137961646 1.1822144951307663 1.0644972118901614 1.0291876401764897 1.7043205392569554 1.6235337071210807 1.0 10.347469759004783 -7.259048969774646 24.94882492558591 1.283315678063532 1.5984639934198541 0.33442517201600575 0.24254379726355937 257.6764499948929 2689378.493238199 0.043361946094724664 0.0728677553856904 5.5074559244310775e-08 7.259048969774646 0.31514831535632215 TGEDEDEEDNDALLKENES(ph)PDVRR ddPTM_A549_MK2206_60min_R1 3 TGEDEDEEDNDALLKENESPDVRR 24 2 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 TGEDEDEEDNDALLKENES(1)PDVRR;TGEDEDEEDNDALLKENES(1)PDVRR;TGEDEDEEDNDALLKENES(1)PDVRR 136.89 1.1302e-23 74545000.0 1950.0 2166.4900000000002 2087.49 1658.11 2668.55 2385.69 2313.7599999999998 2334.7300000000005 3774.38 2648.6 2322.74 True False 2279.112327077264 2276.7550871730273 2383.5274713518816 2064.347024435386 2276.0098300068084 2638.1421323071445 2734.1402422054525 2665.6851273107527 2919.4889564463315 2050.2794204674115 1745.9395536372097 1.3053787127563083 1.3040285858866087 1.365183271314533 1.1823702717169433 1.303601734244084 1.5110157317939579 1.5659993706595308 1.5267911891665968 1.6721592396279343 1.1743129458268982 1.0 10.769787896792442 -7.02929778041497 23.925695699632094 1.376353863427915 1.289129092951815 0.0781257947401448 0.18199948520058495 1616.0979767634094 1319766.6195427591 0.03897365631348776 0.06759628483280639 9.34764519288749e-08 7.02929778041497 -0.0872247704761 TGEDEDEEDNDALLKENES(ph)PDVRR ddPTM_A549_PD325901_60min_R1 4 TGEDEDEEDNDALLKENESPDVRR 24 2 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 TGEDEDEEDNDALLKENES(1)PDVRR;TGEDEDEEDNDALLKENES(1)PDVRR;TGEDEDEEDNDALLKENES(1)PDVRR;TGEDEDEEDNDALLKENES(1)PDVRR 294.91 8.448399999999999e-158 134715600.0 7620.3 7140.540000000001 6588.96 7259.7 8753.66 6438.72 6756.26 7719.0 8021.13 7717.9 8402.39 True False 8393.907246231638 7742.298365527313 7036.126448235212 7708.115181025045 8138.8331200875855 6386.2851990708095 7013.373171467328 7565.038489561646 7684.029800330951 7230.590476854947 7368.949297138687 1.1390914644359047 1.0506651699359086 0.9548344227266283 1.046026356025825 1.1044767431427218 0.8666480038817149 0.9517466993823085 1.0266101969922767 1.0427578601083072 0.9812240775849193 1.0 12.847243211734027 -5.356300975457233 3.42523784357941 1.0101039241691292 1.1440923285418017 0.3090338498712538 0.06011953579018164 0.2510691643908368 4.735784931487815 0.008107230901913062 0.07360544519981345 4.402496552398136e-06 5.356300975457233 0.13398840437267245 TGEITASSNKS(ph)LNLLK ddPTM_A549_MK2206_60min_R1 2 TGEITASSNKSLNLLK 16 1 A0A0D9SFI9;I3L4U9;Q8TAT6;Q8TAT6-2 A0A0D9SFI9 NPLOC4 Nuclear protein localization protein 4 homolog 1 TGEITAS(0.015)S(0.015)NKS(0.969)LNLLK;TGEIT(0.003)AS(0.017)S(0.017)NKS(0.964)LNLLK 97.28399999999999 1.1395999999999999e-06 9168300.0 6203.9 5871.2 5907.1 5580.9 6524.299999999999 4565.7 4794.5 4492.5 8103.4 7737.6 8028.799999999999 True False 7250.966649207512 6170.01900207722 6744.815604397004 6948.220750536122 5564.58411268795 5048.839343533627 5665.5985889867725 5129.325632704232 6267.9928384707455 5989.670786003416 6035.027376392724 1.2014803242767695 1.022368022092583 1.1176114346690067 1.1513155313454824 0.922047865839845 0.8365893025246615 0.9387858970033757 0.8499258268104408 1.038602221257407 0.9924844433072946 1.0 12.559144600082556 -6.755678471709103 24.99949894858707 0.9800420698554013 1.1155932552406094 0.5367835600948038 0.0762200578042318 122.2502461637132 530500.4743682828 0.012389601000331072 0.02524923441532987 1.755179461474151e-07 6.755678471709103 0.13555118538520805 TGEITASSNKS(ph)LNLLK ddPTM_A549_PD325901_60min_R1 2 TGEITASSNKSLNLLK 16 1 A0A0D9SFI9;I3L4U9;Q8TAT6;Q8TAT6-2 A0A0D9SFI9 NPLOC4 Nuclear protein localization protein 4 homolog 1 TGEITASSNKS(1)LNLLK;TGEITASS(0.006)NKS(0.994)LNLLK 144.27 7.0657e-15 19234400.0 10282.5 9855.8 10641.2 11452.0 11750.1 12274.5 12340.400000000001 12217.0 13197.400000000001 11910.7 12346.1 True False 11326.371830423577 10686.382854933103 11363.375822733862 12159.364030620945 10924.813511644406 12174.54054159751 12810.020674925987 11973.322350948903 12642.759173194765 11158.656369307222 10827.607968376144 1.0460640857615235 0.9869569424885429 1.0494816450616349 1.1229963317968679 1.0089775639783198 1.1243979812674516 1.1830887036490252 1.1058141729843758 1.1676410163833117 1.0305744723948227 1.0 13.402426937977948 -6.015527007161661 6.559893257491972 1.090551483993333 1.0165629332865143 0.21240881900336706 0.058106458317702045 0.21487148098221565 42.360930729351125 0.009923779049474503 0.028447830942295603 9.648793076775216e-07 6.015527007161661 -0.07398855070681876 TGEPS(ph)PPHDILHEPPDVVS(ph)DDEKDHGK ddPTM_A549_MK2206_60min_R1 6 TGEPSPPHDILHEPPDVVSDDEKDHGK 27 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 2 T(0.123)GEPS(0.877)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.129)GEPS(0.871)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.035)GEPS(0.965)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.125)GEPS(0.875)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.145)GEPS(0.855)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.099)GEPS(0.901)PPHDILHEPPDVVS(1)DDEKDHGK 138.84 2.04e-24 47364800.0 4592.59 4959.31 4585.65 4154.51 5916.24 6060.8 4116.74 4864.5199999999995 7407.219999999999 7575.38 7876.560000000001 True False 5367.70691395476 5211.7176960743245 5235.964123902275 5172.365136503042 5045.96893319574 6702.149833166567 4864.6983700543105 5554.080606967702 5729.496496899729 5864.096396670096 5920.592770002973 0.9066164694100494 0.880269577478761 0.8843648477954084 0.8736228511964427 0.8522742788123233 1.1320065563575656 0.8216573169331265 0.9380953601652479 0.9677234559905142 0.9904576491700088 1.0 12.53152591043719 -7.74857848672259 0.2708270907327131 1.007829808779266 0.8566235219576618 0.19816812137844797 0.07486237343395225 2.4645474115379753 0.44178006494786165 0.0605701514513983 0.12934796880395247 1.784109530923243e-08 7.74857848672259 -0.1512062868216043 TGEPS(ph)PPHDILHEPPDVVS(ph)DDEKDHGK ddPTM_A549_PD325901_60min_R1 3 TGEPSPPHDILHEPPDVVSDDEKDHGK 27 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 2 T(0.084)GEPS(0.916)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.134)GEPS(0.866)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.111)GEPS(0.889)PPHDILHEPPDVVS(1)DDEKDHGK 149.55 4.8661999999999995e-33 106171000.0 5575.41 5701.1 5930.6 5105.4 6152.7 5192.5 5336.46 5652.15 5803.7 6052.099999999999 6633.599999999999 True False 6141.421518800089 6181.551705012191 6333.086179594921 5420.748962795334 5720.555577662706 5150.21400156789 5539.541905522958 5539.413434224103 5559.790671910406 5669.9693731421485 5817.709253855063 1.055642564937483 1.0625405009568036 1.0885876043733789 0.9317669079463388 0.983300355526021 0.8852649345023795 0.9521861034654181 0.9521640206673186 0.9556666428846115 0.9746051453817469 1.0 12.506235482698328 -6.25672717825809 24.999688545744945 0.9658743203052551 1.068285255882377 0.7282134840805974 0.03058551245433982 191.0032605989686 1013326.5447925074 0.004835464602700911 0.012351579119092435 5.53697830347253e-07 6.25672717825809 0.10241093557712189 TGEPSPPHDILHEPPDVVS(ph)DDEKDHGK ddPTM_A549_MK2206_60min_R1 3 TGEPSPPHDILHEPPDVVSDDEKDHGK 27 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 TGEPSPPHDILHEPPDVVS(1)DDEKDHGK;TGEPSPPHDILHEPPDVVS(1)DDEKDHGK;TGEPSPPHDILHEPPDVVS(1)DDEKDHGK 93.04299999999999 2.2795999999999998e-08 29224900.0 2560.82 3380.09 2534.8199999999997 2667.71 4482.040000000001 3036.2599999999998 2777.8300000000004 2982.54 4530.27 4869.5 3883.9799999999996 True False 2993.0238099620547 3552.1221434683143 2894.2955918026814 3321.299069758055 3822.7378533224864 3357.5550178937306 3282.525754186074 3405.3241786456747 3504.171078354625 3769.476567985374 2919.4805736052454 1.0251905208829635 1.21669661911188 0.9913734716955273 1.1376335570736842 1.3093897208577125 1.1500521867653706 1.1243526618615267 1.1664143989971698 1.2002720997822396 1.2911463094034137 1.0 11.511495996047108 -10.879233158409779 1.0979415691338528 0.9989803523164175 1.1525150521402727 0.0 0.11872172103810211 0.4905879909586464 1.038615859644656 0.058150807809746505 0.013632701321902963 1.3205864644413776e-11 10.879233158409779 0.15353469982385526 TGEPSPPHDILHEPPDVVS(ph)DDEKDHGK ddPTM_A549_PD325901_60min_R1 1 TGEPSPPHDILHEPPDVVSDDEKDHGK 27 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 TGEPSPPHDILHEPPDVVS(1)DDEKDHGK 104.9 7.7869e-12 24282000.0 2080.4 2074.9 1772.6 1634.3 1946.5 1663.7 1756.3 1838.4 2503.3 1849.6 2545.0 True False 2291.6006764904646 2249.7591048621825 1892.8992955097228 1735.2469992354013 1809.784555060453 1650.151378797977 1823.1369575842366 1801.7316698031004 2398.0950064602434 1732.8159403452892 2231.981134084226 1.0267114902970271 1.0079651079959735 0.8480803294452454 0.7774469831920721 0.8108422277516253 0.7393213829627768 0.81682453751217 0.8072342737530999 1.074424407016403 0.776357789895145 1.0 11.124109117439332 -8.762117637518548 24.999999985556638 1.035144865513184 0.8501253120847393 0.0 0.11595472572382505 12.181143291615168 448983.83229168935 0.016304108715670708 0.01786884884868021 1.7293478666251118e-09 8.762117637518548 -0.18501955342844478 TGFSTSPES(ph)PYTHWK ddPTM_A549_MK2206_60min_R1 1 TGFSTSPESPYTHWK 15 0 E9PKG1;Q99873-2;Q99873-3;Q99873;Q99873-5 E9PKG1 PRMT1 Protein arginine N-methyltransferase 1 1 T(0.004)GFS(0.023)T(0.023)S(0.021)PES(0.897)PY(0.003)T(0.029)HWK 56.407 0.0029516 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TGGKEAASGT(ph)TPQK ddPTM_A549_PD325901_60min_R1 1 TGGKEAASGTTPQK 14 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 T(0.001)GGKEAAS(0.016)GT(0.544)T(0.438)PQK 42.813 0.030605 78049000.0 1193.7 1318.5 1541.2 1646.5 1943.7 2345.9 2388.2 1713.7 2553.4 2069.5 2067.3 True False 1314.883545244506 1429.6146222761529 1645.7950999884813 1748.2005655271907 1807.1812174009792 2326.795768180666 2479.0842578731836 1679.518909128358 2446.0894776876885 1938.831416816921 1813.0352056944287 0.7252388376765576 0.7885200561941553 0.9077568349579339 0.9642397235510907 0.9967711667842615 1.2833704281486673 1.3673668608788239 0.9263575819450615 1.3491682180273976 1.069384317925757 1.0 10.824191224409148 -6.440760851680435 1.1386221055955823 1.1704865592383884 0.7544366468328598 0.560609442086002 0.13620335344764048 0.3387894597599345 0.8027838298579267 0.024551311777325818 0.10015773755490832 3.6244252584357426e-07 6.440760851680435 -0.4160499124055286 TGGKEAASGTT(ph)PQK ddPTM_A549_MK2206_60min_R1 2 TGGKEAASGTTPQK 14 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 T(0.001)GGKEAAS(0.021)GT(0.139)T(0.839)PQK;TGGKEAAS(0.028)GT(0.216)T(0.756)PQK 50.608000000000004 0.010075 84616000.0 1911.8899999999999 2682.8999999999996 3349.5 2478.8 3382.7 2431.4 2021.5900000000001 1598.69 3922.3 4226.1 4354.5 True False 2234.5702907773098 2819.448150407578 3824.50946605403 3086.10611127756 2885.109311035594 2688.689134167303 2388.886735115187 1825.309203282789 3033.9053126260364 3271.4210748460778 3273.1574719138716 0.6826956264559793 0.8613848171377462 1.1684465226226264 0.9428529295515564 0.8814453126047189 0.8214359245585517 0.7298416760005023 0.5576600633930084 0.9269047818991916 0.9994695039628575 1.0 11.676467296908562 -8.98569768437429 23.489238554751235 0.9677524744805606 0.8383519495350379 0.16332505832330435 0.14752311469201615 65.46477311390161 107519.24621771777 0.028216758318326714 0.028437973313134187 1.033480568951649e-09 8.98569768437429 -0.12940052494552268 TGGPAYGPSSDVS(ph)TASETESEKREEPNR ddPTM_A549_MK2206_60min_R1 2 TGGPAYGPSSDVSTASETESEKREEPNR 28 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAYGPS(0.066)S(0.066)DVS(0.283)T(0.283)AS(0.255)ET(0.04)ES(0.006)EKREEPNR;TGGPAYGPS(0.006)S(0.006)DVS(0.352)T(0.326)AS(0.303)ET(0.005)ES(0.001)EKREEPNR 80.17399999999999 1.5009e-06 21963700.0 1895.8999999999999 1848.78 1649.82 1487.62 2691.6000000000004 1746.21 1808.27 1517.48 3533.6000000000004 2690.8 3247.7 True False 2215.8815696952743 1942.875005222154 1883.7892841574162 1852.0869667817994 2295.6692055409594 1930.992783159614 2136.809252373994 1732.5874370875958 2733.245241999684 2082.946411158238 2441.2064580398855 0.9076993723318547 0.7958667317233561 0.7716632396876274 0.7586769077568691 0.9403830626370774 0.7909993752474599 0.8753087004733303 0.7097258944983866 1.11962887571348 0.8532446751065434 1.0 11.253378596739278 -8.768359891769249 24.999939572174338 1.05649142261716 0.8194622593206433 0.3566780250251559 0.09214709537202814 63.721028399527434 230187.7744927122 0.012491550528618571 0.013439575816634214 1.7046691758539252e-09 8.768359891769249 -0.2370291632965167 TGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_A549_MK2206_60min_R1 4 TGGPAYGPSSDVSTASETESEKR 23 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAYGPSSDVS(0.006)T(0.067)AS(0.868)ET(0.045)ES(0.013)EKR;TGGPAYGPSSDVS(0.003)T(0.011)AS(0.899)ET(0.083)ES(0.004)EKR;TGGPAYGPSSDVS(0.002)T(0.064)AS(0.896)ET(0.034)ES(0.004)EKR;TGGPAYGPSSDVS(0.016)T(0.083)AS(0.778)ET(0.104)ES(0.018)EKR 126.45 8.8652e-17 69052000.0 12993.999999999998 15217.400000000001 14260.9 11387.4 19835.9 15342.099999999999 15078.7 15634.1 21670.3 19538.7 19482.8 True False 15187.069527201014 15991.900661229358 16283.310059546187 14177.313511199809 16918.065386457838 16965.590838738244 17818.304608145772 17850.2815524232 16762.0116503582 15124.894099783503 14644.683062074557 1.0370364085605295 1.091993633009628 1.1118922813505738 0.9680860590226703 1.155236020796563 1.1584812567691656 1.2167081071416266 1.21889162618003 1.1445800212479096 1.032790811222986 1.0 13.838089350525618 -4.11749138469037 14.914144957116838 1.0940986131494639 0.43625414731172096 0.0 0.08152365202163082 0.0 0.0 0.012077354258728188 0.0 7.629720264564155e-05 4.11749138469037 -0.6578444658377429 TGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_A549_PD325901_60min_R1 2 TGGPAYGPSSDVSTASETESEKR 23 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAYGPSSDVS(0.006)T(0.026)AS(0.966)ET(0.002)ESEKR;TGGPAYGPSSDVS(0.002)T(0.11)AS(0.826)ET(0.061)ES(0.001)EKR 159.1 2.5171999999999998e-33 107073000.0 17891.7 20296.9 18992.3 17969.5 21263.2 18893.300000000003 20389.9 19660.4 21549.0 21734.0 22031.0 True False 19708.052212826613 22007.39099497675 20281.231687977706 19079.435203304496 19769.746186057768 18739.439228853662 21165.848802281394 19268.257898714568 20643.370468666082 20361.71153085235 19321.32666601556 1.0200154758260604 1.1390206984950848 1.0496811134429258 0.9874805976374009 1.0232085264016024 0.9698836706598732 1.0954656048287916 0.9972533580008077 1.0684240697082088 1.053846450754685 1.0 14.237906537324076 -13.088584524392912 0.004424920373640214 1.239648512417674e-05 2.0250230054462217 0.011394370491447647 0.04800561927188618 81885.83625348342 40.11172805415887 9605.258546280686 8768.249000422873 8.154840584225537e-14 13.088584524392912 2.0250106089610975 TGGPAYGPSSDVSTAS(ph)ETESEKREEPNR ddPTM_A549_MK2206_60min_R1 1 TGGPAYGPSSDVSTASETESEKREEPNR 28 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAYGPSSDVST(0.005)AS(0.806)ET(0.158)ES(0.031)EKREEPNR 143.82 4.0347e-36 67079000.0 2012.2 1700.4 2175.4 1350.3 2742.8 2486.5 1842.4 1751.8 3303.2 3157.4 2867.3 True False 2351.8101664332685 1786.9430970043768 2483.9044312446454 1681.1235606172704 2339.337753365191 2749.6197795948838 2177.140231588118 2000.123014662498 2555.0304741264863 2444.1411470904654 2155.270276545793 1.0911903681066237 0.8291039487948925 1.1524793239507518 0.7800059133704439 1.0854034312181018 1.2757656473607768 1.010147198372436 0.9280149392066288 1.1854803093287125 1.1340299978560646 1.0 11.073653083063398 TGGPAYGPSSDVSTAS(ph)ETESEKREEPNR ddPTM_A549_PD325901_60min_R1 3 TGGPAYGPSSDVSTASETESEKREEPNR 28 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 TGGPAYGPSSDVS(0.006)T(0.023)AS(0.966)ET(0.005)ESEKREEPNR;TGGPAYGPSSDVS(0.302)T(0.302)AS(0.384)ET(0.011)ES(0.001)EKREEPNR;TGGPAYGPSSDVS(0.036)T(0.036)AS(0.927)ET(0.001)ESEKREEPNR 240.64 7.6016999999999976e-121 147444000.0 8203.0 7681.9 8666.800000000001 9010.1 9327.400000000001 10726.4 9305.5 11174.7 10062.6 9840.7 10490.9 True False 9035.762521270573 8329.280672630395 9254.981165702164 9566.633413578225 8672.275601783143 10639.047754726591 9659.62589466499 10951.811842117446 9639.70391563411 9219.356522575634 9200.585807294388 0.9820855661285024 0.9052989502067132 1.0059121625021583 1.0397852499776294 0.9425786339504174 1.1563446043068002 1.049892484781422 1.1903385362087113 1.0477271901525642 1.0020401652323447 1.0 13.16751000608963 -5.961984989281086 4.557458991644079 1.0412835497284563 0.9440592556811518 0.2652276045259532 0.06848830767916304 0.21515774050919895 10.2638602423792 0.00955465480551635 0.030791951898254927 1.0914780610524989e-06 5.961984989281086 -0.09722429404730448 TGGS(ph)PSVR ddPTM_A549_MK2206_60min_R1 1 TGGSPSVR 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 T(0.328)GGS(0.65)PS(0.022)VR 62.558 0.010306000000000001 124140000.0 1457.2 1755.6 1675.1 1193.4 1750.0 1145.0 1032.9 1286.1 1889.4 2177.8 2138.3 True False 1703.1397348805094 1844.952541226113 1912.6543682899255 1485.7830535737623 1492.5773182109817 1266.1631400105136 1220.5645599258391 1468.4086135160637 1461.4539167518117 1685.8334674522114 1607.3010959222497 1.0596270600458146 1.1478574524131098 1.1899788864341363 0.9243962175744291 0.9286233438138478 0.7877572803395649 0.7593876237765483 0.9135865191913584 0.9092595783450563 1.0488597760116007 1.0 10.650424499240863 -6.271443346649277 24.149585986065993 0.9231657098363966 1.1340247631070217 0.585436304326837 0.08314001527317878 244.2378177257523 589591.1828758245 0.012473460714631963 0.02932058592712 5.3524997212702e-07 6.271443346649277 0.21085905327062515 TGGS(ph)PSVR ddPTM_A549_PD325901_60min_R1 1 TGGSPSVR 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 T(0.256)GGS(0.372)PS(0.372)VR 46.333999999999996 0.040819 140750000.0 1077.2 875.89 865.08 1059.5 1194.2 1014.0 1002.7 1110.9 1194.2 896.71 1177.6 True False 1186.556551007272 949.7043242362223 923.7895309486347 1124.9429087009162 1110.3235117663473 1005.7423201906291 1040.858297198493 1088.7422280158096 1144.0119269423662 840.091577566514 1032.7626654214482 1.1489150322093256 0.9195765455451165 0.8944838556607351 1.089255979486682 1.0751003584286698 0.9738368299557065 1.0078388114211516 1.0542037047510013 1.1077200650698575 0.8134410796343908 1.0 10.012293037645925 -8.26255112780864 23.059452663028228 1.0525393074990412 1.0107413774987049 0.0 0.10250135984600856 81.38289857164985 1688019.0086075445 0.012568460488546474 0.015638360615122988 5.4632222969400335e-09 8.26255112780864 -0.04179793000033638 TGGSGS(ph)PPLR ddPTM_A549_MK2206_60min_R1 2 TGGSGSPPLR 10 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 T(0.227)GGS(0.042)GS(0.731)PPLR;T(0.212)GGS(0.053)GS(0.735)PPLR 73.632 0.0016724 38447000.0 5861.9 6650.2 7264.3 6003.3 8441.2 6901.0 6247.200000000001 6217.8 9415.3 9463.1 9707.7 True False 6851.245410304732 6988.666774699189 8294.486972460458 7474.108769498379 7199.510661990025 7631.259239486942 7382.2353749334 7099.192191213887 7282.749583144562 7325.37913759162 7297.010171109962 0.9389113143119788 0.9577438719173567 1.1366966439624364 1.024270022137228 0.9866384304210026 1.0458063042998522 1.0116794689639954 0.9728905434887197 0.9980456943829049 1.0038877520815273 1.0 12.833089749357965 -8.015575849441051 23.564614171817563 0.9968586693180643 1.0180431027905643 0.0371522282227047 0.048996734030785666 988.4359218899857 1495402.571087539 0.007748350563216679 0.010186196287255773 9.647708000709145e-09 8.015575849441051 0.021184433472499986 TGGSGS(ph)PPLR ddPTM_A549_PD325901_60min_R1 2 TGGSGSPPLR 10 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 T(0.135)GGS(0.064)GS(0.801)PPLR;T(0.001)GGS(0.035)GS(0.964)PPLR 79.311 0.0012691 46543000.0 10042.0 11821.0 10411.2 10965.4 12366.3 12169.900000000001 12019.099999999999 12576.099999999999 12657.3 12563.5 13221.3 True False 11061.456447470322 12817.197155803104 11117.766639631509 11642.70785376973 11497.733749419001 12070.792369317493 12476.493427603875 12325.259819740406 12125.357697946409 11770.238465899673 11595.163916726044 0.9539715459747966 1.1053916311880918 0.9588278975163181 1.0041003247030518 0.9915973445475403 1.0410195540147005 1.0760083701452907 1.062965552557752 1.0457254235496887 1.0150989283490062 1.0 13.50123559454641 -7.268345159254331 24.186201155892523 1.031291916036345 1.0061103381662762 0.14358361782995244 0.04218213340341579 765.114116128805 2679665.375485854 0.006381254135632697 0.01033372959442652 5.390820121764822e-08 7.268345159254331 -0.025181577870068805 TGHGYVY(ph)EYPSR ddPTM_A549_MK2206_60min_R1 2 TGHGYVYEYPSR 12 0 A0A087WUD2;Q14511-3;Q14511 A0A087WUD2 NEDD9 Enhancer of filamentation 1;Enhancer of filamentation 1 p55 1 TGHGY(0.02)VY(0.624)EY(0.163)PS(0.193)R;TGHGY(0.008)VY(0.991)EY(0.001)PS(0.001)R 80.318 0.00034349 7321500.0 1906.59 1861.5900000000001 1781.69 1779.31 2429.5 1501.1100000000001 1618.63 1771.6399999999999 2628.8 2321.2 2730.3 True False 2228.3757803498693 1956.3369795062222 2034.360433071745 2215.2410298762597 2072.123768339189 1659.9564638438271 1912.714119113913 2022.7753954199509 2033.380997330984 1796.8393078565866 2052.2911575534386 1.085799045690156 0.9532453386576959 0.9912630698545382 1.0793990032667078 1.0096636438318007 0.8088308804208276 0.9319896507248431 0.9856181409616978 0.9907858297041061 0.8755284557180575 1.0 11.003019704574305 -5.250463056430574 23.723397041924898 0.9831396646763332 1.0857991667389342 0.14646925308950753 0.07126006810663257 1094.2997841219512 2365043.7418346307 0.008817400330573334 0.17450173515510098 5.617420613118072e-06 5.250463056430574 0.102659502062601 TGKEYIPGQPPLS(ph)QSSDSSPTR ddPTM_A549_MK2206_60min_R1 1 TGKEYIPGQPPLSQSSDSSPTR 22 1 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 TGKEYIPGQPPLS(0.407)QS(0.085)S(0.07)DS(0.214)S(0.175)PT(0.048)R 53.196999999999996 0.0022709 59589000.0 1139.1 1756.4 1609.9 1894.1 2317.5 1590.2 1437.6 1762.3 2724.1 2174.7 2927.1 True False 1331.3522316788278 1845.793257809039 1838.2080278848744 2358.1545850293787 1976.5988199736853 1758.4739085106712 1698.7933114041896 2012.111421817401 2107.0956994938124 1683.4337596052544 2200.220286149752 0.6050995166527671 0.8389129349584635 0.8354654483718189 1.0717811302231022 0.8983640558248872 0.7992262954669374 0.7721014673385144 0.9145045314251101 0.9576748804462203 0.7651205518839925 1.0 11.1034322583329 -2.703973962339658 0.20532497235914607 0.9964926306678589 1.3617013197516925e-36 0.08265336373008847 0.11725995646245913 29.648407050387753 0.42983623113547215 0.07866312869867086 9.133451599472659 0.001977088170761582 2.703973962339658 -0.9964926306678589 TGKEYIPGQPPLS(ph)QSSDSSPTRNSEPAGLETPEAK ddPTM_A549_PD325901_60min_R1 2 TGKEYIPGQPPLSQSSDSSPTRNSEPAGLETPEAK 35 2 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 TGKEYIPGQPPLS(0.195)QS(0.195)S(0.195)DS(0.175)S(0.175)PT(0.029)RNS(0.029)EPAGLET(0.006)PEAK;TGKEYIPGQPPLS(0.197)QS(0.197)S(0.197)DS(0.169)S(0.169)PT(0.028)RNS(0.041)EPAGLET(0.001)PEAK 97.13799999999999 4.5382999999999997e-10 95312000.0 1885.23 2141.55 2568.01 2397.08 2454.5299999999997 3603.7 2875.5299999999997 3267.17 3187.3 3236.3999999999996 3232.73 True False 2076.6171617670266 2322.025934270379 2742.2906012986145 2545.1421874363286 2282.132280468809 3574.352662002925 2984.959867700392 3202.003731304719 3053.3488651343164 3032.0531516725187 2835.1247039638906 0.7324606070638208 0.8190207404365213 0.967255725106031 0.8977178971626444 0.804949523835081 1.2607391332753346 1.052849584897275 1.129404899483921 1.0769716269853382 1.0694602418839974 1.0 11.469196478677397 -7.22878783356823 24.999195070839974 1.0603484518377702 0.8526781912358894 0.6705789102964163 0.08634101869761861 375.3222715021017 287360.30090836086 0.013188061364134966 0.02284146345449575 5.9048948229197075e-08 7.22878783356823 -0.20767026060188076 TGKEYIPGQPPLSQSSDS(ph)SPTR ddPTM_A549_MK2206_60min_R1 1 TGKEYIPGQPPLSQSSDSSPTR 22 1 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 TGKEYIPGQPPLS(0.034)QS(0.034)S(0.034)DS(0.46)S(0.344)PT(0.094)R 79.382 3.4394e-05 41860000.0 2623.1 3707.8 2775.1 3251.2 4598.1 3045.3 3081.1 2559.9 5581.1 5709.6 5398.2 True False 3065.815151362243 3896.5111827057326 3168.6509088659627 4047.7441459519146 3921.72558106624 3367.551624693463 3640.8959875956107 2922.7736643649587 4316.989761185318 4419.797394510581 4057.6779572592673 0.75555901272979 0.9602810335735974 0.7809025117917953 0.9975518482708612 0.9664950305014212 0.8299208710412431 0.8972855968231719 0.7203069576125571 1.0639064525715098 1.0892430205318475 1.0 11.986438652984436 -8.794831552463283 24.999967007803043 1.030178082677829 0.8719114143341559 0.46739365985174475 0.08805437884046159 125.61743901046923 94046.38476213279 0.014320490475838598 0.015245766027815605 1.6038673537329902e-09 8.794831552463283 -0.1582666683436732 TGKEYIPGQPPLSQSSDS(ph)SPTR ddPTM_A549_PD325901_60min_R1 1 TGKEYIPGQPPLSQSSDSSPTR 22 1 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 TGKEYIPGQPPLS(0.001)QS(0.016)S(0.045)DS(0.505)S(0.365)PT(0.068)R 108.01 1.0703e-10 95684000.0 5208.1 5409.7 4377.3 6700.9 6861.8 7495.0 5988.0 6658.0 6828.1 6814.5 7868.5 True False 5736.822477999422 5865.594404343803 4674.369900843227 7114.799374151932 6379.850839924899 7433.9632049593265 6215.876616759327 6525.200966900042 6541.138702357367 6384.231307030154 6900.724382531134 0.8313362713807152 0.8499969103522356 0.6773738004485701 1.0310221043116456 0.9245190050011558 1.0772728764212147 0.900757119425684 0.9455820295356654 0.9478916038026324 0.9251537886647874 1.0 12.752532097021342 -6.2730321865802425 24.947852056193547 0.974064988653415 0.7926117811868103 0.6206466215252986 0.06350270901413943 303.4226673012976 652968.9530091855 0.008084826192565432 0.018934543595007992 5.332953702552588e-07 6.2730321865802425 -0.18145320746660465 TGKEYIPGQPPLSQSSDS(ph)SPTRNSEPAGLETPEAK ddPTM_A549_MK2206_60min_R1 2 TGKEYIPGQPPLSQSSDSSPTRNSEPAGLETPEAK 35 2 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 TGKEYIPGQPPLSQS(0.001)S(0.001)DS(0.498)S(0.498)PT(0.003)RNSEPAGLETPEAK;TGKEYIPGQPPLS(0.002)QS(0.014)S(0.014)DS(0.48)S(0.48)PT(0.011)RNSEPAGLETPEAK 174.02 1.0767999999999997e-63 43762000.0 1895.21 3970.8 4005.0 3778.5 4895.9 2656.1 3106.0 2182.26 5665.1 6501.1 7315.5 True False 2215.075114564157 4172.896759341908 4572.969222733661 4704.232669623312 4175.719595559512 2937.1667390235134 3670.3199952847885 2491.602037890962 4381.963895305749 5032.496994789957 5498.859452471224 0.40282446454758675 0.7588658694425406 0.831621404813054 0.8554924362558854 0.7593792188456309 0.5341410822390689 0.6674693228675489 0.45311251531828467 0.7968859602942688 0.9151892384753204 1.0 12.42491669731777 -9.607842001157126 1.1535497881922736 0.9582717670824928 0.6765373343547225 0.3669665053612047 0.1449608088018312 0.31026295369113255 0.8506382686250943 0.04095049634275085 0.029228369750295514 2.4669366598153773e-10 9.607842001157126 -0.2817344327277703 TGKEYIPGQPPLSQSSDSS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 TGKEYIPGQPPLSQSSDSSPTR 22 1 V9GYZ6;P07814 V9GYZ6 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 TGKEYIPGQPPLS(0.032)QS(0.085)S(0.051)DS(0.223)S(0.492)PT(0.117)R 93.384 3.4729e-07 97166000.0 2479.4 2780.8 2682.9 2633.1 2858.4 3594.2 2983.2 3560.0 3042.6 3416.8 3756.5 True False 2731.1068627621903 3015.1477752184505 2864.977727588308 2795.7406067960187 2657.63584494467 3564.9300268532124 3096.727308469677 3488.9930072340276 2914.7301029265136 3201.0626648852626 3294.474314415482 0.8289962531538977 0.91521362361977 0.8696312231217451 0.8486150869541836 0.8066949659664285 1.0820937383710385 0.939976157931925 1.0590439245397663 0.8847329876492469 0.9716459621125343 1.0 11.685832563403663 -7.233589926538088 24.992851840897444 0.9618240832633311 0.85782852365314 0.5397036838571465 0.05943210377516677 611.3098444504132 548606.2926932636 0.009623986172672017 0.016666842388706103 5.839962702572106e-08 7.233589926538088 -0.10399555961019114 TGKPTNLLREEEFGVDDSYSEQGAQDS(ph)PTHLEMMESELAGK ddPTM_A549_PD325901_60min_R1 1 TGKPTNLLREEEFGVDDSYSEQGAQDSPTHLEMMESELAGK 41 2 A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6;Q6PJH3;A0A087WX84;A0A0A0MRE9;Q99996-4 A0A0A0MRF6 AKAP9 A-kinase anchor protein 9 1 TGKPTNLLREEEFGVDDS(0.002)Y(0.002)S(0.01)EQGAQDS(0.455)PT(0.455)HLEMMES(0.077)ELAGK 66.658 3.2752e-05 4088300.0 2023.8 1893.7 1686.2 1803.6 2291.3 2686.2 2046.5 2169.8 1885.3 2073.3 2104.2 True False 2229.254686157183 2053.2887449407285 1800.6356719443147 1915.0042757272035 2130.366992555878 2664.3244778067715 2124.380677387771 2126.5216368248284 1806.0673973073535 1942.3914841684095 1845.3967396228013 1.2080083584697578 1.1126543690330895 0.9757444744984021 1.0377195508206165 1.154422215458842 1.443767847097941 1.1511782977475042 1.1523384598910091 0.9786878661531142 1.0525603749389054 1.0 10.84971529756288 -8.758881942081944 24.39421849052394 0.9899359280280187 1.1527662690829525 0.24166540767499411 0.11203494247996418 46.650846503986386 444979.55925266497 0.020093567710443856 0.022272544275490098 1.7422804277512778e-09 8.758881942081944 0.16283034105493388 TGKQDGLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TGKQDGLSPK 10 1 A1X283 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 T(0.005)GKQDGLS(0.995)PK;T(0.149)GKQDGLS(0.851)PK 68.513 0.0011312000000000002 20653300.0 6763.6 6820.6 6987.9 6729.299999999999 8534.4 7115.1 6709.400000000001 6245.2 10595.1 10306.400000000001 10797.8 True False 7905.130325856308 7167.739406861949 7978.889296264807 8377.978802089758 7279.001065451316 7868.015159378868 7928.411132119694 7130.476225122868 8195.326766898019 7978.177081894335 8116.408255880501 0.9739690361347807 0.8831171598186646 0.9830566729419926 1.0322273766871872 0.896825398128234 0.9693961800995327 0.9768373992739215 0.8785260672362919 1.0097233294000878 0.9829689229979265 1.0 12.986625719239271 TGKQDGLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TGKQDGLSPK 10 1 A1X283 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B 1 T(0.033)GKQDGLS(0.967)PK;T(0.048)GKQDGLS(0.952)PK 45.863 0.011564 39825000.0 6146.1 6371.3 6511.4 6243.1 7195.6 7442.599999999999 6472.0 7338.5 7354.299999999999 7568.700000000001 7225.3 True False 6770.047547480321 6908.2318110792985 6953.30276022904 6628.7221078911625 6690.205879472389 7381.989933186167 6718.2955016142905 7192.127860558124 7045.224346267155 7090.810990317577 6336.633904950402 1.0683980878540766 1.0902052911218911 1.0973180500134108 1.0460951677692112 1.0557980751019502 1.1649702419164685 1.060230968427215 1.1350076347221794 1.1118244247569955 1.1190185667469261 1.0 12.629500951800381 -10.768850981898268 1.0128032246617331 0.999875926175744 1.0930409368010265 0.0 0.04837155405662382 0.34782825405499374 0.6323458361662782 0.02312934197474464 0.005836628462692175 1.7027426649127002e-11 10.768850981898268 0.0931650106252826 TGLDAS(ph)PLAADTSYYQGVYSR ddPTM_A549_MK2206_60min_R1 2 TGLDASPLAADTSYYQGVYSR 21 0 Q9Y261;Q9Y261-2 Q9Y261 FOXA2 Hepatocyte nuclear factor 3-beta 1 T(0.004)GLDAS(0.995)PLAADTSYYQGVYSR;TGLDAS(1)PLAADTSYYQGVYSR 149.94 5.4916e-22 9292200.0 2728.4 2894.0 3481.7 2652.3 4020.0 2820.3 3228.9 2998.5 4094.6000000000004 3433.0 4339.5 True False 3188.8872170244167 3041.2922387265753 3975.4574139305328 3302.1136190662737 3428.6633252618008 3118.7422740363772 3815.5493344414217 3423.546557521123 3167.179637732595 2657.48291567795 3261.8823858928145 0.9776217655228491 0.9323733595913021 1.2187617282351535 1.0123337473317413 1.0511302737616446 0.9561173289155065 1.169738477065617 1.0495616188761077 0.9709668415483662 0.8147083804036567 1.0 11.671489048211502 -8.753315758374168 24.39920159007157 0.9862898977352654 1.0481123364745253 0.16430475501543218 0.09624587068092232 220.7964024317707 663158.1074469708 0.013233965695709924 0.014874437650002044 1.7647542709661837e-09 8.753315758374168 0.061822438739259855 TGLDAS(ph)PLAADTSYYQGVYSR ddPTM_A549_PD325901_60min_R1 2 TGLDASPLAADTSYYQGVYSR 21 0 Q9Y261;Q9Y261-2 Q9Y261 FOXA2 Hepatocyte nuclear factor 3-beta 1 TGLDAS(1)PLAADTSYYQGVYSR;T(0.001)GLDAS(0.999)PLAADTSYYQGVYSR 194.77 2.4163e-55 14123600.0 3739.2 4900.9 3701.7 4192.8 4717.2 4160.2 4429.2 4157.0 4577.9 4877.299999999999 4397.6 True False 4118.800831346449 5313.916042710047 3952.919622130397 4451.779733460315 4385.880145456549 4126.320710509914 4597.755629751237 4074.0853738965857 4385.506783076083 4569.346445634774 3856.7230786832233 1.0679534794996755 1.3778318884446181 1.0249425591323547 1.1542907392200576 1.1372038012524333 1.0699032900020236 1.1921404612023687 1.0563593213147093 1.1371069930624624 1.1847743155038388 1.0 11.913159845626675 -14.99999999989658 0.15885934151064549 0.47076849535748544 1.1809040537796944 0.0 0.10449432609242428 54.32030079402209 0.5578874634275489 8.996418741655127 0.1325226351919326 1.0000000002381321e-15 14.99999999989658 0.710135558422209 TGLIIGK ddPTM_A549_PD325901_60min_R1 1 TGLIIGK 7 0 Q96AE4;E9PEB5;Q96AE4-2 Q96AE4 FUBP1 Far upstream element-binding protein 1 0 83.801 0.039735 9489500.0 2870.5 2652.4 3348.1 2596.9 3427.2 3711.9 2569.7 3042.0 4244.1 3563.4 3264.3 False True 3161.911046849588 2875.927056598608 3575.3221997608575 2757.3046150121827 3186.4852951981434 3681.671517076521 2667.491339693795 2981.324923597167 4065.7352362553133 3338.406315866352 2862.8117941026107 1.1044774418503938 1.004581252083359 1.2488848226509397 0.9631456111408466 1.113061397106963 1.28603337622849 0.9317732116336898 1.0413974574712501 1.4201894950379637 1.1661284624939248 1.0 11.483217113001505 TGLLFS(ph)PDVDEK ddPTM_A549_PD325901_60min_R1 1 TGLLFSPDVDEK 12 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 T(0.001)GLLFS(0.999)PDVDEK 85.845 0.00036174 867110.0 835.16 1166.0 1237.5 1016.0 1102.6 1158.3 1136.8 975.39 1124.3 957.34 1002.9 True False 919.9448283877027 1264.2629120773563 1321.4841916920232 1078.7560124965837 1025.1571797635022 1148.867188833141 1180.0615460808294 955.9350812713478 1077.0495808585677 896.8933890193331 879.5496579069043 1.045927106124887 1.4373979919291515 1.5024554666268717 1.2264867626277496 1.1655478125056695 1.3061993470239546 1.3416656302147443 1.0868460611379471 1.2245466429054852 1.0197188765370022 1.0 9.780621221927472 -10.972199948006754 0.24605333731619916 0.8225148490794824 1.32794666892191 0.38732166583226346 0.1267596406128425 4.650609605905489 0.33512984679208907 0.7052061966414652 0.09653401500056819 1.0661051762796828e-11 10.972199948006754 0.5054318198424276 TGLLFS(ph)PDVDEKLPK ddPTM_A549_PD325901_60min_R1 1 TGLLFSPDVDEKLPK 15 1 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 TGLLFS(1)PDVDEKLPK 167.82 1.1743e-27 14424000.0 5747.4 7509.9 8178.1 8089.1 9084.9 8624.9 9010.9 8644.9 8896.8 9100.2 8460.8 True False 6330.871816987745 8142.785628996338 8733.115044910332 8588.745335320977 8446.807965203558 8554.661673976478 9353.814730453683 8472.470687707144 8522.8984354554 8525.611818950152 7420.175237430186 0.8531970761354017 1.0973845453030584 1.176941886878517 1.1574855122013936 1.138356938336799 1.1528921353263344 1.260592160043537 1.1418154445960764 1.148611476513743 1.1489771529847064 1.0 12.857237543096604 -4.202754047123529 15.728237778859768 1.0990657690529972 1.111094475822491 0.0 0.10315528021323352 0.0 0.0 0.014275034162807959 0.0 6.269688337948889e-05 4.202754047123529 0.012028706769493747 TGLS(ph)PLK ddPTM_A549_MK2206_60min_R1 1 TGLSPLK 7 0 P0C7P0 P0C7P0 CISD3 CDGSH iron-sulfur domain-containing protein 3, mitochondrial 1 T(0.018)GLS(0.982)PLK 67.993 0.023104 5738900.0 980.48 1170.9 1120.3 918.86 1398.0 1429.6 1061.3 965.92 1692.6 1730.4 1492.2 True False 1145.9610535654956 1230.4938086817376 1279.175385824849 1143.9807412491925 1192.3560519194014 1580.8793231083234 1254.1244723102857 1102.8421180059381 1309.2288025267897 1339.5014381850067 1121.6455573751025 1.0216784134974837 1.097043357940421 1.1404452836405834 1.0199128715191983 1.0630417461909956 1.4094285959710204 1.1181112108581013 0.983235845543606 1.1672393243286883 1.1942288090720343 1.0 10.131401137611446 -4.339066988284864 16.255988779439047 1.0941208540344318 1.1099136782670307 0.0 0.11692724217515968 0.0 0.0 0.01525842536938572 0.0 4.580712255072271e-05 4.339066988284864 0.015792824232598868 TGLS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 TGLSPLK 7 0 P0C7P0 P0C7P0 CISD3 CDGSH iron-sulfur domain-containing protein 3, mitochondrial 1 T(0.005)GLS(0.995)PLK 65.22399999999999 0.025185 8300400.0 1504.8 1206.4 1459.2 1853.8 2180.6 1525.3 1778.8 1413.8 1681.2 1772.8 1691.1 True False 1657.5661882247891 1308.067561861168 1558.230086882425 1968.3050157147318 2027.4421786616101 1512.878462511604 1846.4932073967082 1385.6006498953566 1610.5450105304847 1660.8651054520585 1483.1054207661434 1.1176320745753343 0.8819788152250471 1.0506536252004754 1.32715111694349 1.3670249938229428 1.0200747980073328 1.2450181770914475 0.9342563451622894 1.0859275328509745 1.1198564054833593 1.0 10.53440543445128 -8.262787647658199 24.99106797020552 1.0337366174582716 1.1413647729926268 0.12705691364730154 0.137557334082631 205.7181951494197 3813118.2609466882 0.023073602628473334 0.02866551492840547 5.460247797438917e-09 8.262787647658199 0.10762815553435523 TGLVEFAR ddPTM_A549_PD325901_60min_R1 1 TGLVEFAR 8 0 P31939-2;P31939;F8WEF0 P31939-2 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase 0 58.596000000000004 0.039550999999999996 2058300.0 1492.6 1401.4 1751.1 1195.0 1475.8 2002.2 1524.3 1520.1 1404.6 1428.2 1625.2 False True 1644.1276532059553 1519.5008962137272 1869.9401762197194 1268.8124359580888 1372.144899233608 1985.8947470272942 1582.3080706289645 1489.7804130046195 1345.5695466280747 1338.0232082618627 1425.3107029916246 1.1535222809700718 1.0660839724450284 1.3119526656853482 0.8902005950667057 0.9626987970788226 1.393306556148806 1.110149574621038 1.0452320394968464 0.9440534921991542 0.938758970555296 1.0 10.47706073082 -8.46532739409518 3.2561140527848584 0.9739224250289561 1.1258396582473058 0.2282725469939032 0.13347040783616576 0.2935354243648122 6.187897351800849 0.022290678924061728 0.02664130033219196 3.425094874754289e-09 8.46532739409518 0.1519172332183497 TGMGS(ph)GSAGK ddPTM_A549_MK2206_60min_R1 2 TGMGSGSAGK 10 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 T(0.014)GMGS(0.946)GS(0.04)AGK;T(0.009)GMGS(0.946)GS(0.045)AGK 44.299 0.020641999999999997 13939500.0 2168.81 2546.34 1745.08 1679.65 2306.28 1911.2399999999998 1932.94 1635.58 2579.65 2858.69 2383.1000000000004 True False 2534.852105686383 2675.9378297024964 1992.5585845712992 2091.164325402354 1967.0292671106426 2113.4861482215656 2284.1301776193736 1867.4284737536766 1995.3633938545627 2212.90994355357 1791.3104997859573 1.4150824806694713 1.4938436580493681 1.1123468459596417 1.16739355106344 1.0980950914683312 1.1798547200354739 1.2751168364682186 1.0424928977845072 1.1139126321723607 1.2353581044816013 1.0 10.806799715607129 -2.0000000000000004 0.2632077484094469 1.0376254383160013 3.933801182399428 0.44896435709830484 0.1075374709916674 20.3089218649306 0.24980340887210575 0.03894000248198505 26.93311643565129 0.00999999999999999 2.0000000000000004 2.8961757440834264 TGMGS(ph)GSAGKEGGPFK ddPTM_A549_MK2206_60min_R1 1 TGMGSGSAGKEGGPFK 16 1 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 T(0.197)GMGS(0.402)GS(0.402)AGKEGGPFK 48.111999999999995 0.005713 4870300.0 1494.2 1987.0 2399.9 1927.0 2166.1 2076.7 1650.2 1430.7 2602.2 2930.3 3030.6 True False 1746.384430317359 2088.129812836801 2740.2419070258466 2399.1150865063178 1847.4695594153188 2296.4550155981055 1950.0199794652149 1633.5061063349915 2012.805854859513 2268.3431948182656 2278.018379695071 0.7666243810338023 0.9166430927200474 1.2029059692629203 1.0531587926992303 0.8109985309524218 1.0080932779416392 0.8560159113932342 0.7170732777641803 0.8835775307172637 0.9957528064904813 1.0 11.153563671825742 -6.736953644792731 24.999670979361312 0.916579215519303 0.9955389520795026 0.08382440579644646 0.12871986559368923 531.788300050101 542947.2571454514 0.01906236935764973 0.03966674826789312 1.8325100082040989e-07 6.736953644792731 0.07895973656019961 TGMGSGS(ph)AGK ddPTM_A549_MK2206_60min_R1 3 TGMGSGSAGK 10 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 T(0.003)GMGS(0.076)GS(0.921)AGK;TGMGS(0.086)GS(0.914)AGK;T(0.001)GMGS(0.017)GS(0.982)AGK 71.085 0.0027984999999999998 37704000.0 9591.3 9548.099999999999 8448.5 8004.3 13455.1 11944.900000000001 10080.5 10724.8 15078.5 13161.5 13162.3 True False 11210.076955228802 10034.057506767525 9646.6243391424 9965.353859326688 11475.872613863186 13208.901389617095 11911.9963658945 12245.073243322504 11663.243825416628 10188.308008941263 9893.737649000335 1.1330477270499961 1.014182694421998 0.9750232603061894 1.0072385394546608 1.159912767145459 1.335076980836633 1.2039935551654828 1.2376589796233124 1.1788511318162034 1.029773415304851 1.0 13.272299928902472 -6.75832390588777 24.99246709849492 1.1308841694612124 1.0269773182709365 0.2593798414471995 0.09697308640859433 125.55646470543378 1007199.5846277416 0.01700916964255919 0.034263031072506 1.7445205677608168e-07 6.75832390588777 -0.10390685119027587 TGMGSGS(ph)AGK ddPTM_A549_PD325901_60min_R1 4 TGMGSGSAGK 10 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 T(0.012)GMGS(0.143)GS(0.846)AGK;T(0.006)GMGS(0.32)GS(0.674)AGK;TGMGS(0.081)GS(0.919)AGK;T(0.004)GMGS(0.152)GS(0.844)AGK 85.522 0.00082816 52380000.0 18566.199999999997 18872.4 15604.2 17497.7 20614.2 17205.4 15092.400000000001 17644.8 17202.9 21823.3 22113.5 True False 20451.026956285943 20462.843380693557 16663.194847677307 18578.493188840046 19166.329707129316 17065.284926832188 15666.749540878183 17292.860621922173 16479.921937696214 20445.373113612324 19393.679689026147 1.054520198549948 1.055129491092523 0.8592074900105793 0.9579663832105378 0.9882771095768136 0.8799405373539569 0.8078275908487426 0.8916750662695169 0.8497573540425816 1.0542286683831987 1.0 14.243298940882449 -5.746141914197863 24.70721514245249 0.9162666953292002 1.0548249892073553 0.34887384822756373 0.07027992932111676 168.66590716648497 272409.9808750409 0.009636914807585491 0.03702801089140702 1.7941472584019519e-06 5.746141914197863 0.1385582938781551 TGNESGSNLS(ph)DSGSVK ddPTM_A549_MK2206_60min_R1 2 TGNESGSNLSDSGSVK 16 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 TGNESGSNLS(0.999)DS(0.001)GSVK;TGNESGSNLS(0.997)DS(0.002)GSVK 147.92 1.5849e-14 8150800.0 3220.0 3486.5 2638.0 2895.3 3826.9 2858.1 2908.2 3171.8 4170.200000000001 4616.4 4167.4 True False 3763.457278558357 3663.9479579544586 3012.1080673087117 3604.648629974954 3263.9680794637757 3160.5422449467646 3436.582295649459 3621.412363230114 3225.6563584409896 3573.5520337709586 3132.519565611177 1.2014154100978711 1.169648866100409 0.9615608152541668 1.1507186322303662 1.0419625515816857 1.0089457316223085 1.0970665062642497 1.1560701497242047 1.029732230199699 1.1407916084552 1.0 11.613107805261757 -2.0000000000000004 0.17640448582000534 0.998788320958229 1.6727746079825072 0.01325238960220132 0.07720754212158218 47.18846739841141 0.48971955174977244 0.07387926540864534 8.570051357744164 0.00999999999999999 2.0000000000000004 0.6739862870242782 TGNESGSNLS(ph)DSGSVK ddPTM_A549_PD325901_60min_R1 2 TGNESGSNLSDSGSVK 16 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 T(0.001)GNES(0.004)GS(0.002)NLS(0.983)DS(0.007)GS(0.003)VK;TGNESGSNLS(0.995)DS(0.005)GSVK 130.27 4.6772e-10 6156600.0 2611.7 2659.2 2705.4 2367.2 3127.7 2723.9 2111.0 3035.0 2802.3 2889.0 2808.8 True False 2876.837861368079 2883.30011646321 2889.004712891798 2513.416567698735 2908.021141979234 2701.7174615061667 2191.335260183525 2974.4645440885606 2684.529076260752 2706.5880469601743 2463.335406450208 1.167862830954778 1.1704862069993922 1.1728020087426914 1.020330630216815 1.1805217975451587 1.0967720654003343 0.8895805477587604 1.2074947391654292 1.0897943776683237 1.098749297344167 1.0 11.266397362469668 -2.0000000002538134 0.062439485391304256 0.8745027377844283 1.5988893674372606 0.12611935664476825 0.08625464418154227 262.7666501146566 1.1885991066702315 2.655401692197794 17.081224429606074 0.00999999999415573 2.0000000002538134 0.7243866296528323 TGPAGPEGKEQDVVTGVS(ph)PLLFR ddPTM_A549_MK2206_60min_R1 2 TGPAGPEGKEQDVVTGVSPLLFR 23 1 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 TGPAGPEGKEQDVVT(0.002)GVS(0.998)PLLFR;TGPAGPEGKEQDVVT(0.145)GVS(0.855)PLLFR 103.86 1.0506999999999999e-10 6092300.0 1475.42 2046.9 1922.15 1689.51 2516.94 2173.32 1601.3 1517.67 2650.7 3033.6000000000004 3094.8 True False 1724.4348254442775 2151.0784669832165 2194.7397731529354 2103.4400258449864 2146.7014601702563 2403.2992798669425 1892.2354824370666 1732.8043701694457 2050.3206822980987 2348.3076530732983 2326.2757478652106 0.7412856481123384 0.9246876553466329 0.9434564131818922 0.9042092399300825 0.922806104194764 1.0331102329861004 0.8134183938312315 0.7448834781343592 0.8813747399377087 1.0094708915004191 1.0 11.183806403183754 -10.501637802486691 1.0197803498428815 0.9944885037904925 0.8844795265885788 0.25017365882813647 0.08248046637471117 0.619364305948519 1.228025946266171 0.04337020469347236 0.01512446922629567 3.1503746015875856e-11 10.501637802486691 -0.11000897720191372 TGPAGPEGKEQDVVTGVS(ph)PLLFR ddPTM_A549_PD325901_60min_R1 2 TGPAGPEGKEQDVVTGVSPLLFR 23 1 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 TGPAGPEGKEQDVVT(0.005)GVS(0.995)PLLFR;TGPAGPEGKEQDVVT(0.001)GVS(0.999)PLLFR 160.99 1.2994e-33 12543400.0 3303.7 3135.6 3411.5 3303.1000000000004 3754.6 3889.6 4078.2 4263.7 4470.4 3257.4 3670.4 True False 3639.089191944601 3399.848016389158 3643.0249050160314 3507.124985115618 3490.889848666826 3857.9243871927697 4233.398132676667 4178.657158692058 4282.524634234759 3051.7272080886382 3218.964068582611 1.1305156300011083 1.0561932174304123 1.1317382944942733 1.089519767973021 1.0844761775187972 1.1984987421408244 1.315143021941446 1.2981372484011675 1.3304046093687711 0.9480463723947029 1.0 11.652380757604737 -7.2621873736499145 24.89403677793758 1.1874145900007698 1.0974878058661726 0.11362377643926536 0.11511512231263803 128.45431388436495 4275120.097560303 0.02016448588807296 0.03342515764187356 5.467800071674622e-08 7.2621873736499145 -0.0899267841345972 TGPLSAQPS(ph)VEKENLAIESQSK ddPTM_A549_PD325901_60min_R1 2 TGPLSAQPSVEKENLAIESQSK 22 1 Q09GN1;Q71F23-3;Q71F23 Q09GN1 MLF1IP;CENPU Centromere protein U 1 T(0.001)GPLS(0.023)AQPS(0.973)VEKENLAIES(0.003)QS(0.001)K;T(0.025)GPLS(0.153)AQPS(0.822)VEKENLAIESQSK 53.705 0.002132 5663000.0 3582.6 4094.1 3588.0 4009.1 3776.7 3942.1 4088.6 3990.2 3766.2 3673.4 4404.3 True False 3946.3029146292765 4439.124175245197 3831.503256396751 4256.733001673281 3511.437620907687 3909.996844599088 4244.193910367767 3910.612330748657 3607.919711313297 3441.460897093634 3862.5990211580215 1.0216703553780118 1.149258349346946 0.9919495229530846 1.1020385440881453 0.9090867578211483 1.0122709665645948 1.0987922606306004 1.0124303116444742 0.9340652994396579 0.8909702711160195 1.0 11.915356202922457 -6.544303904914802 0.4610075092985271 0.9735052281653783 1.095464860553514 0.22106259662831496 0.06858340436980517 2.058171139230908 0.5839610688940131 0.015694388189399968 0.11232344792486788 2.855591595503557e-07 6.544303904914802 0.12195963238813567 TGPPPIS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 TGPPPISPSK 10 0 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;E7ERW0;E7EWF5;F8W708;E7EQU6;F8WBN7;E7EUJ2;A0A096LP98 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 T(0.028)GPPPIS(0.804)PS(0.168)K;TGPPPIS(0.92)PS(0.08)K 145.09 4.141200000000001e-08 68900000.0 13083.1 14204.9 12627.1 13386.8 19769.7 14745.1 13438.8 14201.0 22026.0 20664.0 22721.0 True False 15291.207428915171 14927.868735966531 14417.8126522797 16666.56660095628 16861.60331876323 16305.416694994763 15880.456005355181 16214.03523873852 17037.14616829437 15995.988048228714 17078.7486323011 0.8953353526144682 0.8740610367514513 0.8441960803270585 0.9758657943729403 0.9872856426303283 0.9547196370204939 0.9298372115694951 0.949369042651805 0.9975640800797286 0.9366018783118245 1.0 14.059914651456856 -5.654307809967682 0.30818535675075787 1.0037081829932804 0.7822043618564342 0.3925505765953272 0.0381636085333432 2.8235812694940985 0.22601712477403732 0.013614232048926376 0.22596231624549123 2.2166248109271602e-06 5.654307809967682 -0.2215038211368462 TGPPPIS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 TGPPPISPSK 10 0 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;E7ERW0;E7EWF5;F8W708;E7EQU6;F8WBN7;E7EUJ2;A0A096LP98 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 T(0.028)GPPPIS(0.782)PS(0.191)K;T(0.002)GPPPIS(0.803)PS(0.195)K 92.24700000000001 0.00062407 109795000.0 11052.9 12026.599999999999 11437.8 11883.5 14094.8 12163.400000000001 12322.1 13745.5 13423.0 14146.8 15811.5 True False 12174.98227128507 13040.123789356368 12214.03788907881 12617.516805613337 13104.829872420292 12064.345303162425 12791.024258411846 13471.335219363857 12858.877989739882 13253.568633692008 13866.785737356684 0.8779959899781281 0.9403854675728266 0.8808124766920266 0.9099092640929862 0.9450517315715273 0.8700174309798022 0.9224217133429292 0.9714821786762381 0.9273149692576896 0.9557779924432893 1.0 13.759345795316522 -14.999999999966796 0.144507329785139 1.3114180457436233 0.8858568278008673 0.42211901860328427 0.029649989690308198 30.126543353553473 0.28980943653490515 2.6618932935357353 0.05454011418130636 1.0000000000764543e-15 14.999999999966796 -0.42556121794275603 TGPPPISPS(ph)K ddPTM_A549_MK2206_60min_R1 1 TGPPPISPSK 10 0 Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M7;E7ERW0;E7EWF5;F8W708;E7EQU6;F8WBN7;E7EUJ2;A0A096LP98 Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 1 TGPPPIS(0.39)PS(0.61)K 77.64 0.0013877000000000002 2537100.0 1925.8 2410.4 2653.8 2239.0 3164.1 2230.8 2061.6 2088.3 3582.0 3589.6 3488.7 True False 2250.827958710461 2533.0790643491823 3030.148744891532 2787.5551005125308 2698.6650814579234 2466.8617753148064 2436.166034217359 2384.3229201505305 2770.682719278602 2778.7068669145297 2622.3595067782603 0.8583216576112214 0.9659541560955672 1.1555047037064217 1.0629950215854362 1.029098060156294 0.9407031221075813 0.9289977319739611 0.909228087906157 1.056560975761316 1.059620871864496 1.0 11.356649766977032 TGPSLSERPT(ph)SDSVAR ddPTM_A549_MK2206_60min_R1 1 TGPSLSERPTSDSVAR 16 1 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;F5GYP8;Q6IB99 Q8NHQ8 RASSF8;C12orf2 Ras association domain-containing protein 8 1 TGPSLSERPT(0.594)S(0.38)DS(0.026)VAR 92.39 3.4394e-06 14030000.0 1439.1 1845.8 1442.5 1611.8 2428.5 1725.9 1467.4 1397.8 2752.3 2387.4 2345.9 True False 1681.984897383021 1939.7433359507647 1647.06819070994 2006.6910723564517 2071.2708670144984 1908.533592440301 1734.0075856667409 1595.9424305829675 2128.908444519958 1848.0846818786904 1763.3482864537275 0.9538585827339099 1.100034151422114 0.9340572156748236 1.1380004096593483 1.174623801166379 1.0823350140762922 0.9833608022803063 0.9050636467243631 1.2073102409061847 1.0480542590910253 1.0 10.784101740326264 -6.2699853647318005 24.900926650020114 1.0844128313965087 1.0063883982764252 0.08276109172183055 0.09229575369382668 1067.7598623096953 3111197.737901339 0.01499432306218783 0.03538676671655532 5.370498940830508e-07 6.2699853647318005 -0.07802443312008345 TGPSLSERPT(ph)SDSVAR ddPTM_A549_PD325901_60min_R1 1 TGPSLSERPTSDSVAR 16 1 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;F5GYP8;Q6IB99 Q8NHQ8 RASSF8;C12orf2 Ras association domain-containing protein 8 1 TGPSLSERPT(0.5)S(0.5)DS(0.001)VAR 111.95 1.3641e-07 20928000.0 4549.4 5018.9 4633.5 5221.8 6227.3 5777.1 5029.4 5705.9 5818.2 5643.0 6409.1 True False 5011.251738908729 5441.860316831079 4947.9571734989795 5544.338726431756 5789.9159310187315 5730.053212991398 5220.796569193279 5592.09134830804 5573.681287335512 5286.700016959597 5620.821330632305 0.8915515089580327 0.968161056316463 0.880290776462444 0.986392984280832 1.0300836106397646 1.0194334379148118 0.9288316176749873 0.9948886504953124 0.9916133176054023 0.9405564962807452 1.0 12.456565241274351 -6.366754340338237 6.803518887401993 0.9948985078712294 0.9190994473055029 0.44306707122959266 0.03553719814866489 0.13315792681545535 7.4585418101053875 0.004135262197612795 0.009672535657986842 4.2977946375266843e-07 6.366754340338237 -0.0757990605657265 TGPSLSERPTS(ph)DSVAR ddPTM_A549_PD325901_60min_R1 1 TGPSLSERPTSDSVAR 16 1 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;F5GYP8;Q6IB99 Q8NHQ8 RASSF8;C12orf2 Ras association domain-containing protein 8 1 TGPSLSERPT(0.202)S(0.794)DS(0.004)VAR 100.39 3.6429000000000004e-07 19431000.0 6676.0 6346.3 5470.9 5808.6 7113.7 6486.6 5321.6 6769.7 7236.7 6819.5 7783.1 True False 7353.742605388555 6881.124973341789 5842.188173194252 6167.384029712264 6614.058252932728 6433.775280225375 5524.116400091259 6634.673022773088 6932.566665302139 6388.915606176846 6825.828041135936 1.0773407359621625 1.0081011317414688 0.8558944259928956 0.9035363903902134 0.9689752236758713 0.9425633405137297 0.8092961567153617 0.9719953363590689 1.0156374616417148 0.9359912918511818 1.0 12.736788354632807 -8.521305516322764 23.7876976263159 1.006670269137558 0.9341958739829247 0.054037914569814105 0.07072580680309032 40.212042113817866 608030.6982796108 0.011433473668379315 0.013064697525875843 3.0108871881155107e-09 8.521305516322764 -0.07247439515463328 TGQAGS(ph)LS(ph)GSPKPFSPQLSAPITTK ddPTM_A549_PD325901_60min_R1 1 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-17;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 2 T(0.196)GQAGS(0.754)LS(0.575)GS(0.453)PKPFS(0.02)PQLS(0.002)APITTK 50.908 0.0023208 3882400.0 1111.4 1707.7 1689.4 2016.9 2216.6 2178.3 1803.9 2324.7 1811.3 2159.7 2048.5 True False 1224.228509830563 1851.6138721736704 1804.0528431874775 2141.479332287757 2060.9136628548677 2160.560647013064 1872.5484016319554 2278.3320348081297 1735.1773599654211 2023.3361734232917 1796.547486511409 0.6814339832496203 1.0306512274658495 1.0041776556046635 1.1919970656863335 1.147152345444992 1.2026181680332353 1.0423038721164712 1.2681724540620214 0.9658399641497045 1.1262358432574848 1.0 10.811011353956575 -5.257682675963525 4.727463046969984 1.0460350414110655 0.659232874222803 0.5174528405765715 0.10538117171976226 0.13548056671998066 8.313958376369134 0.016050072304887544 0.17245781517358943 5.5248097067728865e-06 5.257682675963525 -0.38680216718826255 TGQAGSLSGS(ph)PKPFSPQLSAPITTK ddPTM_A549_MK2206_60min_R1 2 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-17;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TGQAGSLS(0.003)GS(0.997)PKPFSPQLSAPITTK;TGQAGSLS(0.004)GS(0.996)PKPFSPQLSAPITTK 285.61 5.8293999999999985e-154 155944000.0 23378.0 25803.5 24742.9 24756.3 38763.0 29515.0 27848.4 27338.1 41033.0 40925.0 38049.0 True False 27323.634862775547 27116.787934340427 28251.81527619894 30821.594611352553 33061.01404903559 32638.25770952864 32908.09380447164 31213.359394419957 31739.091016236423 31680.01407635309 28600.383201022163 0.9553590478395763 0.9481267346575722 0.98781247361711 1.0776636940392814 1.1559640238615407 1.1411825317208395 1.1506172338032001 1.091361579844301 1.109743558089882 1.1076779584974534 1.0 14.803746856570971 -6.150812687431871 3.395924642677411 1.0780181634703583 0.954433217145561 0.6186609531875196 0.0463390408894468 0.19021505270744932 4.07388584201284 0.008852843343982984 0.025973326553500865 7.066222569377295e-07 6.150812687431871 -0.12358494632479733 TGQAGSLSGS(ph)PKPFSPQLSAPITTK ddPTM_A549_PD325901_60min_R1 2 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-17;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TGQAGSLS(0.069)GS(0.931)PKPFSPQLSAPITTK;TGQAGSLS(0.031)GS(0.969)PKPFSPQLSAPITTK 278.57 2.0374999999999993e-153 260090000.0 60470.0 60409.0 59331.0 63194.0 76305.0 68966.0 68312.0 67688.0 71730.0 72695.0 76115.0 True False 66608.86988433881 65499.8784354039 63357.55844628646 67097.34985601282 70945.60003795943 68404.36376160434 70911.65054176071 66337.90973979114 68715.43754779431 68105.02529379369 66753.33753273901 0.9978357988717891 0.9812225254397152 0.9491294486243912 1.0051534849939914 1.062802290644484 1.0247332386647423 1.0622937093891713 0.9937766738218277 1.0293932871010831 1.0202489914514274 1.0 16.026552350005943 -6.511947777110646 24.487991609070605 1.0205306719302252 0.9766723916679213 0.46805217801944754 0.02333904267580472 313.3056783746406 701878.5675471803 0.0034679195197271965 0.0076288592433051096 3.076466730383504e-07 6.511947777110646 -0.04385828026230387 TGQAGSLSGSPKPFS(ph)PQLSAPITTK ddPTM_A549_MK2206_60min_R1 2 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-17;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 T(0.124)GQAGS(0.113)LS(0.103)GS(0.103)PKPFS(0.544)PQLS(0.011)APIT(0.001)TK;TGQAGSLS(0.046)GS(0.209)PKPFS(0.734)PQLS(0.01)APITTK 108.52 1.1605e-12 6588200.0 1842.0 1965.06 1937.6499999999999 1855.7600000000002 2587.52 1722.8 1888.97 1719.88 2563.01 2442.22 3056.46 True False 2152.884567423757 2065.0731605501182 2212.437906224688 2310.4212833082324 2206.8992356670183 1905.1055524979147 2232.1713977762743 1963.6782569115978 1982.4923272859417 1890.520805804545 2297.4566279953797 0.9370729968043977 0.8988518587843701 0.9629944170720325 1.0056430468174562 0.9605836335603096 0.8292237290939387 0.9715836941496174 0.8547183145846734 0.862907400787689 0.8228755149358785 1.0 11.165821910848168 TGQAGSLSGSPKPFS(ph)PQLSAPITTK ddPTM_A549_PD325901_60min_R1 1 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-17;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TGQAGSLSGS(0.001)PKPFS(0.999)PQLSAPITTK 133.23 2.8645e-24 6785400.0 1832.8 2412.9 2053.3 1421.2 2705.5 2704.0 2239.0 2577.0 2580.4 2605.9 2707.6 True False 2018.8645067639527 2616.2435510732867 2192.649285495946 1508.9842962206144 2515.4750134683068 2681.979520508341 2324.206370227813 2525.599713382607 2471.9547615827155 2441.3630292743223 2374.582364890552 0.8501977175497996 1.101769974272454 0.9233831253509744 0.6354735546476467 1.0593336540609948 1.1294531451773657 0.9787853243553162 1.0635974353742899 1.0410061146464598 1.0281231198256828 1.0 11.213458083123358 TGQLEGAPAPGPAAS(ph)PQTLDHSGATATGGASELK ddPTM_A549_MK2206_60min_R1 2 TGQLEGAPAPGPAASPQTLDHSGATATGGASELK 34 0 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 TGQLEGAPAPGPAAS(0.959)PQT(0.041)LDHSGATATGGASELK;TGQLEGAPAPGPAAS(0.79)PQT(0.21)LDHSGATATGGASELK 231.35 5.549899999999999e-116 46395000.0 2581.84 3290.4 3661.6000000000004 3298.7 4161.9 3610.6000000000004 3184.3 3729.3 5703.700000000001 6205.9 6083.6 True False 3017.591472072393 3457.8673055652825 4180.869939066562 4106.881648084271 3549.6900232355924 3992.671295477693 3762.8460917531734 4257.9396955022585 4411.821056937283 4803.982879815262 4572.87422118159 0.6598894537914219 0.7561693452114676 0.9142761722377448 0.8980963502256769 0.7762492147265717 0.8731207337791204 0.822862363964362 0.9311298517198325 0.9647807579096956 1.0505390368191574 1.0 12.15888552242207 -2.531636128344912 0.15016545083023397 1.041369270539219 1.959398118203063e-15 0.7065770529031519 0.05946181978915105 22.694523305209433 0.2455090815134351 0.11241183574935029 5.04039620326174 0.0029401119797335205 2.531636128344912 -1.041369270539217 TGQLEGAPAPGPAAS(ph)PQTLDHSGATATGGASELK ddPTM_A549_PD325901_60min_R1 3 TGQLEGAPAPGPAASPQTLDHSGATATGGASELK 34 0 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 TGQLEGAPAPGPAAS(0.99)PQT(0.01)LDHSGATATGGASELK;TGQLEGAPAPGPAAS(0.991)PQT(0.009)LDHSGATATGGASELK;TGQLEGAPAPGPAAS(0.971)PQT(0.029)LDHSGATATGGASELK 242.97 8.245799999999998e-132 71165000.0 6179.900000000001 6687.900000000001 7080.9 7825.0 9303.4 8439.1 7263.9 9944.6 8092.6 8884.9 9625.0 True False 6807.278898598069 7251.512804187096 7561.452454910749 8308.332478135602 8649.961278987632 8370.374767574689 7540.331689458596 9746.247151612215 7752.496164774569 8323.905897693478 8441.18601790204 0.8064363093244495 0.8590632630068938 0.8957808107621896 0.9842612709298572 1.0247329297853194 0.9916112202506644 0.8932787020055102 1.1546063705908631 0.9184131410364728 0.9861062035643053 1.0 13.043230001833264 -5.922728866353809 1.9432014528692407 0.9775277146597545 0.8202493358698603 0.4860234611499543 0.06478195964039422 0.2531624444685433 1.8069703784702054 0.009261223089442955 0.04456931301781807 1.1947337538716885e-06 5.922728866353809 -0.15727837878989426 TGQPAQPAPSAQQPPRPPAS(ph)PDEPSVAASSVGSSR ddPTM_A549_MK2206_60min_R1 2 TGQPAQPAPSAQQPPRPPASPDEPSVAASSVGSSR 35 1 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 TGQPAQPAPS(0.001)AQQPPRPPAS(0.999)PDEPSVAASSVGSSR;TGQPAQPAPS(0.04)AQQPPRPPAS(0.909)PDEPS(0.003)VAAS(0.003)S(0.003)VGS(0.019)S(0.023)R 103.14 1.7829e-14 54240000.0 1267.88 1660.37 1652.69 1547.49 1983.0 1787.51 1591.03 1918.9899999999998 2170.37 2430.4 3037.2 True False 1481.8671473101156 1744.875740986332 1887.0662933132824 1926.6251194694662 1691.3033268642166 1976.6631217468935 1880.0995563740996 2191.012709160399 1678.7846603687028 1881.370952013892 2282.9794175443362 0.6490935204768824 0.7642976224740519 0.8265805108935612 0.8439082300364412 0.7408316141034026 0.8658260808470499 0.823528912230146 0.9597163655190285 0.7353481365042137 0.8240858141583991 1.0 11.156702137505222 -14.999999987713625 0.31437277193108615 2.9392384619222796 0.7868920137929115 0.048513706579462856 0.09318784604177738 30.292992859154896 0.40021291212433513 37.53844811650981 0.026620616703095443 1.0000000282904233e-15 14.999999987713625 -2.152346448129368 TGQPAQPAPSAQQPPRPPAS(ph)PDEPSVAASSVGSSR ddPTM_A549_PD325901_60min_R1 2 TGQPAQPAPSAQQPPRPPASPDEPSVAASSVGSSR 35 1 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 TGQPAQPAPSAQQPPRPPAS(1)PDEPSVAASSVGSSR;TGQPAQPAPSAQQPPRPPAS(1)PDEPSVAASSVGSSR 166.52 1.6086999999999998e-52 88147000.0 2076.8 2182.41 2786.8 2321.33 2594.9 2816.7 2695.2 2018.6 2745.6 3080.8 3030.7 True False 2287.6352071406473 2366.32934986856 2975.9290063897633 2464.7132819770623 2412.643175919019 2793.761729073909 2797.767310870032 1978.3374394389334 2630.211980081192 2886.2777622273825 2657.9431131902024 0.8606787691535308 0.8902859275375414 1.1196360793508096 0.927300990659196 0.9077106142513481 1.0510991432471593 1.0526061663945867 0.7443114300006328 0.9895666942714488 1.0859065221915607 1.0 11.376094512227025 -4.336756760478151 0.008260807983837614 1.8661515544692473 4.4801179686224714e-08 0.0772155693145613 0.10252525880626114 26605.226627439377 25.431248468015205 2647.028815408745 3114.596400989414 4.605144261458992e-05 4.336756760478151 -1.8661515096680676 TGQPDLLGTGTLGPS(ph)PTATGTLGR ddPTM_A549_MK2206_60min_R1 2 TGQPDLLGTGTLGPSPTATGTLGR 24 0 Q9NVM1 Q9NVM1 EVA1B Protein eva-1 homolog B 1 TGQPDLLGT(0.005)GT(0.004)LGPS(0.248)PT(0.248)AT(0.248)GT(0.248)LGR;TGQPDLLGT(0.004)GT(0.034)LGPS(0.241)PT(0.241)AT(0.241)GT(0.241)LGR 63.184 0.00036426 1297500.0 168.52 415.68 220.84 269.44 666.85 477.93 239.16 635.6 785.77 381.96 690.78 True False 196.9620560815697 436.8363364871676 252.15843274619277 335.4528120956213 568.7572483708534 528.5042353757419 282.6122762628172 725.6982464433634 607.7943496168471 295.67497071725904 519.2402614418796 0.3793273956349711 0.8412990457907014 0.485629585128806 0.6460454571918239 1.095364305517199 1.0178414014123967 0.5442803596894248 1.397615517002033 1.170545496470288 0.5694376816932463 1.0 9.020258442777706 -6.714884092241151 0.7467631410109756 1.0852161180002748 0.5146987883329819 0.2429590498065507 0.2723690748064079 0.5367199866726309 0.5166223355169098 0.03862208785338256 0.17041768665420604 1.9280394141070693e-07 6.714884092241151 -0.570517329667293 TGQPDLLGTGTLGPSPTAT(ph)GTLGR ddPTM_A549_PD325901_60min_R1 1 TGQPDLLGTGTLGPSPTATGTLGR 24 0 Q9NVM1 Q9NVM1 EVA1B Protein eva-1 homolog B 1 TGQPDLLGTGTLGPS(0.03)PT(0.021)AT(0.651)GT(0.298)LGR 129.84 1.7039e-22 2770300.0 1095.3 1104.3 1181.1 1283.8 1192.9 1146.4 1016.9 1522.4 1170.5 768.6 1161.2 True False 1206.4940496827562 1197.3632365411877 1261.2565485312718 1363.0974102786556 1109.11481928159 1137.0640984877082 1055.5986859690313 1492.0345377003048 1121.3079555233953 720.0704648299036 1018.3797614532826 1.1847191935167922 1.175753173680991 1.2384933364459159 1.338496169968502 1.0890974676272274 1.1165423170478728 1.0365471957756065 1.4651062346045558 1.1010705416250894 0.7070746023097753 1.0 9.992059938215574 -8.984163128282477 16.01912173085076 1.044576494066489 1.2029787134104126 0.3326291067361924 0.15179113167935232 1.8513764550147536 1872.8483052504016 0.020039508764973894 0.020390729146925916 1.0371387759471107e-09 8.984163128282477 0.15840221934392362 TGQPDLLGTGTLGPSPTATGT(ph)LGR ddPTM_A549_PD325901_60min_R1 1 TGQPDLLGTGTLGPSPTATGTLGR 24 0 Q9NVM1 Q9NVM1 EVA1B Protein eva-1 homolog B 1 TGQPDLLGT(0.023)GT(0.019)LGPS(0.141)PT(0.185)AT(0.185)GT(0.447)LGR 66.137 0.0002852 4117800.0 994.71 724.72 1101.5 1095.6 1148.0 1234.9 1240.3 1485.4 1401.9 1204.8 1565.4 True False 1095.6922269332008 785.7946978050617 1176.2544138575868 1163.2727237118677 1067.368440384999 1224.84338382979 1287.500295218203 1455.7725317262418 1342.9830182385717 1128.728722387546 1372.8657238881922 0.7981058947484039 0.5723754946547546 0.8567876620345882 0.8473317553717337 0.7774747535848064 0.8921800308050685 0.9378195353087996 1.0603895970271902 0.9782333369318978 0.8221697888929675 1.0 10.42297481112752 -7.017388201030842 0.6711041264688473 0.9981289280222364 0.7040176044940628 0.49319040582662355 0.08983800237151737 0.32515751619126754 0.26632987991232326 0.013246462681221271 0.04706339500472332 9.607531100004204e-08 7.017388201030842 -0.2941113235281736 TGRDT(ph)PENGETAIGAENSEK ddPTM_A549_MK2206_60min_R1 2 TGRDTPENGETAIGAENSEK 20 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 T(0.202)GRDT(0.798)PENGETAIGAENSEK;T(0.29)GRDT(0.71)PENGETAIGAENSEK 217.68 2.8657999999999995e-67 229780000.0 4274.1 4446.799999999999 4105.299999999999 4768.7 5618.9 5132.7 5172.200000000001 4813.8 6201.6 5887.4 5817.0 True False 4995.463588287661 4673.123126181523 4687.49327093346 5937.031714075078 4792.367253311822 5675.838907189485 6111.921789958786 5496.170891644216 4796.947501920204 4557.432251023119 4372.478358967276 1.1424787450446126 1.0687584345838261 1.0720449333545898 1.3578184330859282 1.096029953695121 1.2980827899466256 1.3978163613832828 1.2569921313326617 1.0970774714258806 1.04229955573743 1.0 12.094235528388694 -9.048133335241232 2.4358643716404 1.0362331891851058 1.2111461355294744 0.3203894845689227 0.10765841872507416 0.2373852324706342 2.8777090642512366 0.022047934574846783 0.021776267216977424 8.950899166681997e-10 9.048133335241232 0.1749129463443686 TGRDT(ph)PENGETAIGAENSEK ddPTM_A549_PD325901_60min_R1 2 TGRDTPENGETAIGAENSEK 20 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 T(0.006)GRDT(0.993)PENGET(0.001)AIGAENSEK;T(0.049)GRDT(0.951)PENGETAIGAENSEK 265.7 1.7470999999999997e-111 251480000.0 25398.6 23323.0 23518.0 24630.0 27754.0 22520.8 24040.4 24847.0 27011.0 25426.0 27418.0 True False 27977.047174538908 25288.51106207561 25114.072905222634 26151.339161211472 25804.654786102146 22337.398071547454 24955.270577411666 24351.407092905578 25875.821603282744 23820.5980207717 24045.75981702214 1.1634919165554414 1.051682760474623 1.0444283356537658 1.0875655150933838 1.0731478224212685 0.9289537216343097 1.037824163898771 1.012711067490039 1.076107463444141 0.9906361122308539 1.0 14.553494893907404 -2.000000841743089 0.8693980878464479 1.0320238484751816 52.08465844789353 0.44789575762894396 0.04316642444752057 558.7714020629866 1.3416647364535736 0.006823028371573947 56521.7467534154 0.009999980618167894 2.000000841743089 51.05263459941835 TGS(ph)CSELDACPSK ddPTM_A549_MK2206_60min_R1 2 TGSCSELDACPSK 13 0 H0Y9Z7;A0A1B0GUA8;Q9H1H9;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 H0Y9Z7;Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 T(0.003)GS(0.645)CS(0.353)ELDACPSK;T(0.001)GS(0.785)CS(0.213)ELDACPSK 206.49 2.7198e-31 21094000.0 8514.0 8651.4 6885.8 6823.9 9199.7 8155.5 7574.5 6274.3 10718.1 10591.3 9585.0 True False 9950.95505268505 9091.719306882887 7862.3099809986115 8495.755806336514 7846.436316768898 9018.509596817237 8950.688604083914 7163.701239237884 8290.467463288656 8198.71797402269 7204.779967457684 1.3811601600092163 1.2619010362492775 1.0912630248960882 1.1791832428901186 1.08905981198724 1.251739766870293 1.2423264339108333 0.9942984062795335 1.1506898893144233 1.1379553589498073 1.0 12.814738656116258 -2.000000031311274 0.04072904342521063 0.5649231501665847 2.1740230224241115 0.3266785167580013 0.0919779954456522 389.4311578290256 1.1740606697209741 12.419614921261493 42.44220248208911 0.009999999279031299 2.000000031311274 1.6090998722575267 TGS(ph)CSELDACPSK ddPTM_A549_PD325901_60min_R1 1 TGSCSELDACPSK 13 0 H0Y9Z7;A0A1B0GUA8;Q9H1H9;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 H0Y9Z7;Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 T(0.2)GS(0.433)CS(0.367)ELDACPSK 212.55 1.8791999999999997e-37 15456000.0 8181.3 9231.2 9478.4 8258.8 8019.4 7497.0 8217.1 9189.3 6198.8 8804.4 9147.5 True False 9011.85955324527 10009.145620899219 10121.661222249435 8768.927318904316 7456.145009428099 7435.94691762243 8529.806237069653 9006.012202633608 5938.285992907668 8248.488681431694 8022.415490780142 1.1233349311815446 1.2476473740860654 1.261672526670038 1.0930532492342377 0.9294139674013598 0.9268962603804655 1.0632466302540222 1.1226060546208154 0.7402117229819765 1.0281801897335496 1.0 12.969820971702724 -6.614059292913571 2.7351749936545855 0.9137133858687354 1.2136532667420692 0.42587224436410187 0.10840887296756124 0.16934921615821147 2.553428987192335 0.01900801221325952 0.04401528646354576 2.4318719702750103e-07 6.614059292913571 0.2999398808733338 TGS(ph)EPALSPAVVR ddPTM_A549_MK2206_60min_R1 2 TGSEPALSPAVVR 13 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 T(0.003)GS(0.997)EPALSPAVVR;T(0.012)GS(0.986)EPALS(0.002)PAVVR 159.5 1.6253999999999998e-18 11133800.0 2233.5 2410.6 1865.77 1909.67 2844.1 1897.19 1850.73 1842.42 2484.2 3137.8 2713.2 True False 2610.4601961677304 2533.2892434949144 2130.364241373228 2377.5392357283436 2425.7366575564865 2097.949386547202 2186.9836847628517 2103.588677174611 1921.532666452234 2428.9688007032555 2039.437559489429 1.2799902522248616 1.242150921320249 1.0445841950202008 1.1657818228686334 1.1894145257203985 1.0286901782236575 1.0723464783645353 1.0314552987350307 0.9421875445567883 1.1909993465606985 1.0 10.993955622146068 -6.635010012772615 0.4274836504245189 0.9682464531846007 1.2935389644773527 0.29735314106190336 0.08792726850144494 0.7909204740517537 0.19754735230856227 0.016603677903090204 0.10886745154163137 2.3173412224459635e-07 6.635010012772615 0.32529251129275205 TGS(ph)EPALSPAVVR ddPTM_A549_PD325901_60min_R1 2 TGSEPALSPAVVR 13 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 T(0.012)GS(0.987)EPALS(0.001)PAVVR;T(0.186)GS(0.814)EPALSPAVVR 164.53 5.9719e-19 13506000.0 5437.9 5033.8 5338.4 5161.4 6207.4 5249.7 5170.799999999999 5899.0 5239.8 5249.299999999999 6208.6 True False 5989.951604829603 5458.015992122637 5700.695926407031 5480.207955610106 5771.413638367459 5206.948183732486 5367.577623570328 5781.339817324021 5019.589427895333 4917.8583021488585 5444.981559558089 1.1000866649979513 1.0023938432889028 1.0469633118224362 1.0064695161345736 1.0599509980408202 0.9562838967915765 0.9857843529604087 1.0617739939220714 0.9218744587084917 0.9031909930927274 1.0 12.410711447657686 -7.016015559203364 0.5977922520976423 0.9678604934331487 1.0570931632096878 0.3632074675631827 0.04633556282834612 0.8632152643792738 0.5435670426397754 0.00949185423711148 0.036409211674691154 9.637944937282867e-08 7.016015559203364 0.0892326697765391 TGS(ph)ES(ph)SQTGTSTTSSR ddPTM_A549_PD325901_60min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.448)GS(0.549)ES(0.502)S(0.409)QT(0.05)GT(0.008)S(0.008)T(0.007)T(0.007)S(0.006)S(0.006)R 45.434 0.028076999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TGS(ph)ESS(ph)QTGTSTTSSR ddPTM_A549_MK2206_60min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.452)GS(0.547)ES(0.001)S(0.998)QT(0.002)GTSTTSSR 285.62 2.3122999999999996e-107 164820000.0 2920.7 3392.4 3051.0 2624.7 5028.6 5200.3 4093.4 5287.6 6936.9 5860.7 6218.1 True False 3413.642755740805 3565.058669888056 3483.6776775431704 3267.7516178272617 4288.899601346141 5750.592294320239 4837.117794172168 6037.133492595862 5365.703225953019 4536.7637995670775 4673.974159170434 0.7303512256359328 0.7627467650614492 0.7453352455336371 0.6991377159019729 0.9176130323551813 1.2303431937118132 1.0349046934035018 1.2916488810172133 1.147995911664466 0.9706437487819338 1.0 12.190434042629697 -6.985794664181509 4.156390257345786 1.0970259904455004 0.7398676174837217 0.7902274037858331 0.09089538909234558 0.07671310724415992 3.104956614401798 0.013847727724648692 0.02614628654182026 1.0332498141048337e-07 6.985794664181509 -0.35715837296177877 TGS(ph)ESS(ph)QTGTSTTSSR ddPTM_A549_PD325901_60min_R1 4 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.099)GS(0.888)ES(0.014)S(0.998)QTGTSTTSSR;T(0.087)GS(0.911)ES(0.029)S(0.948)QT(0.021)GT(0.003)S(0.001)TTSSR;T(0.379)GS(0.621)ES(0.164)S(0.804)QT(0.02)GT(0.003)S(0.003)T(0.003)T(0.002)SSR;T(0.075)GS(0.923)ES(0.019)S(0.962)QT(0.018)GT(0.002)STTSSR 269.08 1.9168999999999997e-91 278103100.0 6718.660000000001 7764.6 7231.469999999999 6866.3099999999995 7832.629999999999 6435.57 6475.320000000001 7183.67 7286.91 8712.420000000002 8269.26 True False 7400.733417183923 8418.950091866067 7722.241040561713 7290.42637417856 7282.493089906582 6383.160851626433 6721.741846031069 7040.386066369908 6980.66651361212 8162.316314329099 7252.193443158091 1.0204820755527375 1.1608832772943645 1.0648145421227113 1.0052719127420047 1.0041779975928629 0.8801696895783266 0.9268563916165993 0.9707940254974847 0.9625593371613471 1.1254962210129187 1.0 12.824201692336931 -6.354331183668919 2.1510554837582165 0.9703691330239493 1.0942774090135396 0.30958984663591715 0.06480915699298292 0.18054205475305596 1.6111865908059817 0.006657198371074062 0.019510316133566095 4.4225099260614274e-07 6.354331183668919 0.12390827598959031 TGS(ph)ESSQTGTSTTSSR ddPTM_A549_MK2206_60min_R1 2 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.1)GS(0.684)ES(0.201)S(0.015)QTGTSTTSSR;T(0.124)GS(0.676)ES(0.2)SQTGTSTTSSR 353.55 1.6896999999999996e-211 1951380000.0 5178.1 6474.9 5688.3 5424.200000000001 9205.3 6745.3 7799.6 6630.4 10862.9 10417.3 10884.7 True False 6052.036687609633 6804.444753466031 6494.986474326064 6753.129243501596 7851.212564187177 7459.083168832242 9216.686360342312 7570.279504748391 8402.470494486746 8064.024694870937 8181.728587562508 0.7397014729637529 0.8316634658120826 0.7938403730721949 0.8253915014691877 0.9596031547810365 0.9116757038569088 1.1264962240807033 0.9252665159605008 1.026979861842374 0.9856138111363778 1.0 12.998189964167167 -6.851254478268194 1.2779323879342905 1.0115578260772589 0.7836106268343652 0.7399889740928326 0.05577988493934813 0.14453855223995982 0.46834287473287023 0.007759448801405519 0.02041890022694126 1.408463256453824e-07 6.851254478268194 -0.22794719924289364 TGS(ph)ESSQTGTSTTSSR ddPTM_A549_PD325901_60min_R1 2 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.043)GS(0.734)ES(0.223)SQTGTSTTSSR;T(0.001)GS(0.694)ES(0.305)SQTGTSTTSSR 394.01 1.4531999999999991e-294 3248000000.0 13341.900000000001 13660.0 12424.400000000001 12592.5 16491.6 15371.6 15204.2 14159.400000000001 16549.1 18106.0 18560.2 True False 14696.359866212344 14811.176139774176 13267.59449798657 13370.31012535752 15333.286908931408 15246.418786037744 15782.80415105748 13876.979659165589 15853.598878045468 16962.784070010704 16277.413062801608 0.9028682757825685 0.9099219932939965 0.8150923274354138 0.821402643882791 0.9419977762911362 0.9366610484856485 0.9696137887614067 0.8525297973102572 0.9739630503249517 1.0421056469209693 1.0 13.990583812690216 -8.30492991444419 0.42915219174565705 1.0019762630017042 0.8651575126565031 0.5158114146195139 0.048266232249614995 0.5959295958331976 0.26503786746437324 0.01995715038922994 0.027483540407432255 4.955301519957171e-09 8.30492991444419 -0.13681875034520108 TGS(ph)GGVASSSESNR ddPTM_A549_MK2206_60min_R1 1 TGSGGVASSSESNR 14 0 K7EMT0;Q15428 K7EMT0 SF3A2 Splicing factor 3A subunit 2 1 T(0.021)GS(0.977)GGVASSSESNR 51.643 0.023418 2646800.0 516.31 239.63 355.04 365.42 316.32 235.71 356.53 367.6 492.67 509.31 495.62 True False 603.4505054324422 251.82614345751523 405.390010696469 454.9479164043275 269.78974702657035 260.6526757483651 421.3068860009292 419.70842572778537 381.08103163232505 394.256517268843 372.5438755838682 1.6198105645588357 0.6759637185360825 1.088167158998716 1.2211928479331777 0.7241824781141368 0.6996563165609903 1.1308919931662742 1.1266013300312578 1.0229158405438206 1.0582821061034644 1.0 8.541266535778133 -5.242121711390844 24.711961654268993 0.9906741409736414 1.6198112294289186 0.5098239288246756 0.18121564792143782 2385.8020465697446 3051964.9658624516 0.023471352234539698 1.2073992272324636 5.7263552691206685e-06 5.242121711390844 0.6291370884552773 TGS(ph)GIGNLQR ddPTM_A549_MK2206_60min_R1 2 TGSGIGNLQR 10 0 A0A0D9SF60 A0A0D9SF60 PKP4 1 T(0.183)GS(0.817)GIGNLQR;T(0.041)GS(0.959)GIGNLQR 99.5 0.00047226 10639900.0 2890.0 3284.2999999999997 2871.0 2402.5 3876.6 2793.65 2340.5099999999998 2733.1 3829.8999999999996 4230.8 4126.7 True False 3377.761346283744 3451.456841620488 3278.150970903455 2991.1126078523243 3306.357275300967 3089.2721887252133 2765.7503709478415 3120.5252947677122 2962.433765093553 3275.0593415817866 3101.9264988740333 1.0889237212776757 1.1126816972850035 1.056811298428054 0.9642757843998131 1.0659044553444899 0.9959204996786953 0.8916234385153161 1.005995885428114 0.9550302904239947 1.0558146180351464 1.0 11.598948786327437 -6.086789706689622 0.9228356274407489 0.976568505526095 1.1205502477093345 0.42274420419727177 0.04750406018400018 0.46733785611277273 0.5803221551943193 0.006442438673714269 0.05038313725816844 8.188611996824448e-07 6.086789706689622 0.14398174218323956 TGS(ph)GQGPSSTGQPGR ddPTM_A549_MK2206_60min_R1 1 TGSGQGPSSTGQPGR 15 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.048)GS(0.916)GQGPS(0.035)S(0.002)TGQPGR 88.992 3.5641999999999995e-05 10387000.0 214.92 507.23 556.2 293.33 547.54 505.53 562.52 523.14 644.37 722.98 672.67 True False 251.1932417104851 533.0458404455009 635.0775235167199 365.1958631680839 466.997591321852 559.0248490563446 664.7226026231807 597.2966970490583 498.42122384744613 559.658315868583 505.6274742524525 0.49679508037387216 1.0542264168567683 1.2560186221202745 0.7222626968758167 0.9236001109557722 1.1056061577406127 1.3146488995795635 1.1812979465408493 0.9857479057765591 1.106858990793593 1.0 8.98193104706124 -7.175906283872428 7.403988746338065 1.0425071893499434 0.9098395050312146 0.1871374921720974 0.20294537028580725 0.5829822180580966 44.585022920080895 0.030130901361891872 0.052341555178793554 6.669506745445354e-08 7.175906283872428 -0.13266768431872877 TGS(ph)GQGPSSTGQPGR ddPTM_A549_PD325901_60min_R1 3 TGSGQGPSSTGQPGR 15 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.134)GS(0.775)GQGPS(0.031)S(0.031)T(0.031)GQPGR;T(0.006)GS(0.526)GQGPS(0.441)S(0.028)TGQPGR;T(0.088)GS(0.909)GQGPS(0.001)S(0.001)T(0.001)GQPGR 115.87 9.8469e-07 41326600.0 2018.0700000000002 2305.44 1715.2 2251.2 2972.07 2171.6 2161.48 2333.0699999999997 2366.42 2751.13 2268.78 True False 2222.9429807753863 2499.727519742385 1831.603786335482 2390.251511153848 2763.3220562848815 2153.915209591685 2243.7363042072393 2286.535088591992 2266.967596847223 2577.4231822892175 1989.734442981381 1.1172058606195558 1.2563121317821888 0.9205267531033141 1.2012917199002393 1.3887893764076231 1.0825139089235942 1.12765616141482 1.1491659586320928 1.139331735872472 1.2953603891116519 1.0 10.958360181079842 -10.469295345190837 0.5369038125590745 0.9810651640118739 1.1606936357280555 0.0 0.13946765968117616 1.416232551930797 0.6385958041457416 0.12497674393693108 0.025606881398186565 3.393943864159362e-11 10.469295345190837 0.17962847171618157 TGS(ph)GSPFAGNS(ph)PAREGEQDAASLK ddPTM_A549_MK2206_60min_R1 1 TGSGSPFAGNSPAREGEQDAASLK 24 1 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 T(0.075)GS(0.462)GS(0.462)PFAGNS(0.999)PAREGEQDAASLK 88.29299999999999 9.6999e-08 5745700.0 3242.4 2809.4 2774.6 2537.4 3082.9 2798.8 2043.4 2338.9 3578.9 3263.7 3294.5 True False 3789.637850930935 2952.3864600823895 3168.08000134752 3159.063113908215 2629.409493892936 3094.96715830692 2414.6593298019743 2670.446237580843 2768.2848643289185 2526.4279032619093 2476.384726425594 1.530310621969021 1.1922163905217809 1.279316564805468 1.2756754151314755 1.0617936162480768 1.2497925404241148 0.9750743913233894 1.078364847385954 1.1178735011520815 1.020208159217872 1.0 11.274019750986827 -2.0000000000000786 0.2789505022017056 1.03551379399463 4.164859671804417 0.7043859952054271 0.08537612876710908 18.337557872312182 0.22790553999923913 0.030559021021722053 28.409398177727358 0.009999999999998191 2.0000000000000786 3.1293458778097873 TGS(ph)GSPFAGNS(ph)PAREGEQDAASLKDVFK ddPTM_A549_PD325901_60min_R1 1 TGSGSPFAGNSPAREGEQDAASLKDVFK 28 2 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 T(0.307)GS(0.347)GS(0.347)PFAGNS(0.999)PAREGEQDAASLKDVFK 125.02 1.5903e-21 8223600.0 3478.3 2955.1 3433.7 3192.9 3147.9 3643.4 2968.5 3805.7 3268.4 3582.3 3481.0 True False 3831.414455410877 3204.136647924351 3666.7315305154757 3390.1181813979747 2926.802363665452 3613.7293583654223 3081.4678919255275 3729.7923279861056 3131.0405141671654 3356.1129666408556 3052.8590678770915 1.2550250012278426 1.049552755854025 1.2010811665358863 1.1104732010296852 0.958708639537921 1.1837196798207756 1.009371157794169 1.2217374746289034 1.0256092549809186 1.0993343918016634 1.0 11.575945275199958 -2.0000000167636056 0.09612906644546987 0.9264204854222711 1.6343410475445925 0.08856879974065612 0.09212338521208381 105.79851629767224 0.7026730406660266 0.6063976311215469 9.907828038099904 0.009999999614003724 2.0000000167636056 0.7079205621223215 TGS(ph)HSEPQAR ddPTM_A549_MK2206_60min_R1 2 TGSHSEPQAR 10 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 T(0.014)GS(0.965)HS(0.02)EPQAR;T(0.045)GS(0.905)HS(0.05)EPQAR 66.262 0.0051586 7142300.0 393.66 888.1700000000001 825.9 663.0799999999999 878.22 792.77 998.76 831.4300000000001 853.58 1323.08 1437.3400000000001 True False 460.1001839370444 933.3740593192056 943.025038965226 825.5346297667924 749.0350013709995 876.6603952018645 1180.221763841157 949.2877486475868 660.245492887166 1024.1953090810318 1080.4088094340766 0.4258574901643454 0.8639082273015818 0.8728409382918556 0.7640946857876987 0.6932884986039198 0.8114154452896987 1.0923844322033647 0.8786375493780251 0.611107098648155 0.9479701573495225 1.0 10.077361593112016 -7.508037614232273 24.204407993961556 0.8412050071844103 0.7432758479655467 0.17183077729671858 0.16211047016071248 1170.919697274145 1909653.6789604023 0.028701333642032662 0.04491833176627075 3.104290713957723e-08 7.508037614232273 -0.09792915921886358 TGS(ph)HSEPQAR ddPTM_A549_PD325901_60min_R1 3 TGSHSEPQAR 10 0 Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A0C4DH52;Q9NZB2-2;Q9NZB2-5 Q9NZB2-4 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 T(0.14)GS(0.843)HS(0.017)EPQAR;T(0.004)GS(0.996)HSEPQAR;T(0.009)GS(0.989)HS(0.002)EPQAR 105.46 0.00017106 18821800.0 1826.39 1543.67 1741.95 1692.1799999999998 1668.0 2169.48 1782.79 1911.8899999999999 1857.76 1731.28 2066.0299999999997 True False 2011.8037682827446 1673.7604884103355 1860.1692021963001 1796.7021153803828 1550.8454342876112 2151.8124741688016 1850.6350490301218 1873.7558541013104 1779.6848077344246 1621.9666853379072 1811.9214076432354 1.1103151382815748 0.9237489448217262 1.0266279731281616 0.9916004677693784 0.855912087436946 1.1875859875002317 1.0213660709695136 1.0341264506270738 0.982208610278113 0.8951639284661899 1.0 10.82330466429438 -5.230681543755441 23.009729251406977 0.9987480959563312 1.1103156894854436 0.14027666767643387 0.0827279929347085 5806.504456421219 4343595.25446563 0.009543391620127467 1.438539820864706 5.879203003574627e-06 5.230681543755441 0.11156759352911239 TGS(ph)IVLPYIMSSTLR ddPTM_A549_MK2206_60min_R1 2 TGSIVLPYIMSSTLR 15 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.142)GS(0.839)IVLPY(0.005)IMS(0.006)S(0.003)T(0.003)LR;T(0.046)GS(0.367)IVLPY(0.091)IMS(0.165)S(0.165)T(0.165)LR 57.136 0.0038751999999999997 8860500.0 3011.3 3567.0 4088.9 3081.8 4804.9 4203.4 3752.8 3838.2 5927.6 5042.1 5607.4 True False 3519.533820783474 3748.5450641111597 4668.767504328504 3836.8411383472603 4098.105575012543 4648.200998008899 4434.63518296998 4382.27660399452 4585.008064432112 3903.0861081094677 4214.927823632992 0.8350163912771028 0.8893497637357308 1.1076743658932533 0.9102981827670193 0.9722836894227632 1.1027949214092245 1.0521260074977072 1.0397038306144195 1.0878022723720415 0.9260149334527069 1.0 12.041292211350608 -4.0980815161119555 0.6436113508257132 1.042727138953952 1.723809574614186e-13 0.3900764835371555 0.0696047902825787 6.832732262786073 0.6345028598361241 0.010158603973971765 7.435269915089237 7.97844919489331e-05 4.0980815161119555 -1.0427271389537798 TGS(ph)IVLPYIMSSTLR ddPTM_A549_PD325901_60min_R1 1 TGSIVLPYIMSSTLR 15 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.43)GS(0.551)IVLPY(0.013)IMS(0.003)S(0.001)T(0.001)LR 67.648 0.0010329 5516100.0 3514.2 3547.3 3825.4 4439.6 4581.8 5171.3 4398.6 4457.8 5069.5 4734.1 4954.1 True False 3870.9589969826907 3846.243420250434 4085.0146479989226 4713.8240089368455 4259.990174351908 5129.186647339048 4565.991130006277 4368.885681923551 4856.446544661128 4435.188118073442 4344.7771066273735 0.8909453585266924 0.8852567866792307 0.9402127077515166 1.0849403532684199 0.9804853206057141 1.1805408013946592 1.050914930259937 1.005548863544554 1.117766556367937 1.0208091253537859 1.0 12.085066451250295 -6.104710429121778 3.362784971508447 1.0579829818372075 0.8903778648848032 0.6014356890728181 0.05500303312022629 0.1315697036405553 2.7699718836482896 0.008278105700782978 0.024995232250398826 7.85759374153714e-07 6.104710429121778 -0.16760511695240432 TGS(ph)NAAQYK ddPTM_A549_MK2206_60min_R1 2 TGSNAAQYK 9 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 T(0.003)GS(0.997)NAAQYK;T(0.164)GS(0.836)NAAQYK 122.39 0.00011398 536470000.0 11778.5 13433.7 12237.0 12271.4 17888.3 14009.699999999999 11158.9 13718.5 18697.6 18968.7 18930.8 True False 13766.422843322864 14117.417950028057 13972.390606389969 15277.893550884075 15256.95476648772 15492.197155113783 13186.327686858796 15663.139386144258 14462.623453931763 14683.6574956657 14229.759896499527 0.9674388706101329 0.9921051411064845 0.9819133076045176 1.073657859444444 1.0721863810394214 1.0887180997990564 0.92667253578204 1.1007311086111395 1.0163645457917754 1.0318977693557452 1.0 13.79662369854302 -3.49262154365665 16.46755717880854 1.0167766934178395 0.981293728596121 0.0 0.05344241225598713 0.0 0.0 0.006589576177019211 0.0 0.0003216462232765803 3.49262154365665 -0.03548296482171853 TGS(ph)NAAQYK ddPTM_A549_PD325901_60min_R1 3 TGSNAAQYK 9 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 T(0.078)GS(0.922)NAAQYK;T(0.041)GS(0.959)NAAQYK;T(0.389)GS(0.611)NAAQYK 128.08 5.1472e-05 775789000.0 25425.1 26010.8 25354.300000000003 26535.4 28950.6 29112.0 27183.800000000003 27899.3 28917.4 29802.2 30150.0 True False 28006.23743503064 28202.82140091055 27074.995265791575 28174.431391734124 26917.20973014806 28874.92152405282 28218.294384546123 27342.826574922565 27702.102240967324 27920.48400592474 26441.74113659703 1.0591676732009243 1.0666022806598041 1.0239490329295329 1.0655285991261347 1.0179817429984954 1.0920204299288037 1.0671874533061756 1.0340781431022474 1.047665586689595 1.0559245649402806 1.0 14.690529558151084 -10.449965026077233 0.5612561662946216 0.9946703515085746 1.0543309592134948 0.0 0.025997208430497354 0.6975577009870302 0.35231873168315575 0.020859372920609187 0.004511088795413096 3.548419636600577e-11 10.449965026077233 0.05966060770492021 TGS(ph)NIS(ph)GASSDISLDEQYKHQLEETKK ddPTM_A549_MK2206_60min_R1 1 TGSNISGASSDISLDEQYKHQLEETKK 27 2 P22059 P22059 OSBP Oxysterol-binding protein 1 2 T(0.567)GS(0.638)NIS(0.737)GAS(0.044)S(0.014)DISLDEQYKHQLEETKK 65.134 0.00018125 2071700.0 1090.5 1017.7 1119.2 928.33 1625.2 695.46 826.95 702.82 1331.8 1583.1 1595.9 True False 1274.5497398347477 1069.4965830518438 1277.9193892842725 1155.7708916743177 1386.1352328894213 769.0531155910141 977.1961107858198 802.4468872959803 1030.149426447582 1225.4766104892997 1199.5939854007 1.0624842699665673 0.8915488040685702 1.0652932615841764 0.9634683949238508 1.155503653535251 0.641094507767249 0.8146057104974624 0.668932069568471 0.8587484090323124 1.0215761544352477 1.0 10.228330478524946 -7.227176399210126 24.999363853939666 0.8815604585201758 1.0186224971870168 0.32444995236760277 0.12922798713017758 838.5849813297444 611858.7493463767 0.02028628905413833 0.03513571736418219 5.926845425186179e-08 7.227176399210126 0.13706203866684097 TGS(ph)NIS(ph)GASSDISLDEQYKHQLEETKK ddPTM_A549_PD325901_60min_R1 1 TGSNISGASSDISLDEQYKHQLEETKK 27 2 P22059 P22059 OSBP Oxysterol-binding protein 1 2 T(0.225)GS(0.641)NIS(0.59)GAS(0.309)S(0.223)DIS(0.012)LDEQYKHQLEETKK 88.242 3.2090999999999996e-09 7219200.0 1797.1 1766.0 1937.9 1615.3 2457.7 2569.5 1928.9 1964.0 2310.9 2336.8 2146.6 True False 1979.5402690449032 1914.8270177775385 2069.417547539371 1715.0734123875307 2285.079630604715 2548.574843915011 2002.3053450345813 1924.826479271805 2213.7809093712217 2189.2540491992163 1882.5818084185476 1.051502920187997 1.0171281849292266 1.099244419703478 0.9110219830649849 1.2138009728906727 1.353765787238711 1.0635953965350418 1.0224397530372107 1.1759281320320927 1.162899821622247 1.0 10.87849684386755 -6.764614919214388 24.99831524870711 1.1070637040315956 1.0252189518146684 0.19671399706598258 0.10440530823450968 155.8871555176367 1227180.183739028 0.01682621112171246 0.032791876803140295 1.7194322998718996e-07 6.764614919214388 -0.08184475221692722 TGS(ph)NISGASSDISLDEQYK ddPTM_A549_PD325901_60min_R1 1 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.121)GS(0.868)NIS(0.011)GASSDISLDEQYK 186.9 1.5232000000000003e-43 22673000.0 3210.1 3325.6 3609.2 3969.6 3530.1 3510.5 3782.5 3803.5 3507.0 3606.1 3869.4 True False 3535.9869888492817 3605.859983194215 3854.142015882706 4214.79317638429 3282.1579541838732 3481.9116519025665 3926.44510736342 3727.6362087119705 3359.6129859210137 3378.4102305791253 3393.4883301475484 1.0419917927625635 1.0625821079624673 1.1357463591793546 1.2420237720991458 0.9671929397915936 1.0260567631747752 1.1570527803149093 1.098467372230478 0.9900175450949431 0.9955567551435288 1.0 11.728553336517463 -8.761581526262665 24.99999999929838 0.9952860576578962 1.0927998856611854 0.2793352327811812 0.06878761943329145 3.5392666164602824 622396.3999294998 0.011856703113766753 0.01302093642619804 1.7314839640668872e-09 8.761581526262665 0.09751382800328912 TGS(ph)NISGASSDISLDEQYKHQLEETKK ddPTM_A549_MK2206_60min_R1 1 TGSNISGASSDISLDEQYKHQLEETKK 27 2 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.173)GS(0.77)NIS(0.055)GAS(0.001)S(0.001)DISLDEQYKHQLEETKK 178.76 1.1502e-49 19020000.0 1460.1 1864.4 1865.2 1476.1 2296.8 1382.2 2367.0 1852.9 3302.5 2717.9 3116.6 True False 1706.5291839823149 1959.2899965037398 2129.7134068022033 1837.7445662646464 1958.9437625525625 1528.463486569897 2797.0532610557275 2115.554249268263 2554.4890230088163 2103.924502336472 2342.6622062158167 0.7284572139569924 0.8363519039600031 0.9090996564299396 0.7844684399605434 0.836204108878724 0.6524472382379348 1.1939635401272404 0.9030556106872919 1.0904214086994517 0.8980912812586045 1.0 11.193933228384923 -7.760764698731896 24.999999375305663 1.0414022341198828 0.80032772417928 0.5551898382962217 0.09944009909519819 8.396457723108098 311118.5357918618 0.01317953179858987 0.018910121112857867 1.7347436293511064e-08 7.760764698731896 -0.24107450994060275 TGS(ph)NISGASSDISLDEQYKHQLEETKK ddPTM_A549_PD325901_60min_R1 1 TGSNISGASSDISLDEQYKHQLEETKK 27 2 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.022)GS(0.887)NIS(0.091)GASSDISLDEQYKHQLEETKK 208.28 1.1724e-81 48433000.0 3379.6 2868.6 3434.7 3951.8 4609.7 4441.0 5047.4 5076.1 5075.6 4502.4 5477.2 True False 3722.694504069974 3110.346989352575 3667.7993965289634 4195.893710811027 4285.930574601684 4404.833968408858 5239.4815690432615 4974.853203376585 4862.290182874455 4218.117695615609 4803.539122831483 0.7749899415570083 0.6475115346867742 0.7635618869211896 0.8735004761109815 0.8922443358960944 0.9169976252451952 1.0907544281547996 1.0356641376627573 1.0122307862058884 0.8781270616838875 1.0 12.229882022487121 -6.659210431212785 0.9979486324455152 1.01257706448529 0.701666632712335 0.7563318730717621 0.06259749709186763 0.14116193880577865 0.2621659049415555 0.007517986628315465 0.02748904296578118 2.1917427002808407e-07 6.659210431212785 -0.3109104317729551 TGS(ph)PEIK ddPTM_A549_MK2206_60min_R1 2 TGSPEIK 7 0 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;E9PKA2 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 T(0.069)GS(0.931)PEIK;T(0.013)GS(0.987)PEIK 69.423 0.022028 4388700.0 3005.4 3814.4 3116.8999999999996 3544.1 4616.9 3299.2 3220.8 3444.1000000000004 4734.8 4720.799999999999 4887.9 True False 3512.6380450246224 4008.5366673803182 3558.923288474044 4412.404659100694 3937.7601259704466 3648.3191541682827 3805.977669289519 3932.3117221138914 3662.375359921922 3654.36800126201 3674.099530822784 0.9560541339602732 1.091025606070786 0.9686518447901309 1.2009485921881307 1.071761963151994 0.9929832122297656 1.035894002696547 1.0702790409255143 0.9968089675300015 0.9946295604146698 1.0 11.843174994039895 -8.774098184031399 24.307896143402075 0.9984931145349993 1.050802012865023 0.11389432000316879 0.06345486318833195 241.3615764464929 463469.5083767073 0.010426493497322269 0.011139228824056298 1.682293690018465e-09 8.774098184031399 0.05230889833002372 TGS(ph)PEIK ddPTM_A549_PD325901_60min_R1 1 TGSPEIK 7 0 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;E9PKA2 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 T(0.009)GS(0.991)PEIK 56.431999999999995 0.03762 3382700.0 3143.4 3540.8 3894.1 4414.5 4587.7 4560.0 4178.5 4354.6 4827.5 4729.5 5529.0 True False 3462.515653951224 3839.1956424386804 4158.3770431255825 4687.173638943081 4265.475778705803 4522.864871863184 4337.515104062933 4267.744086882386 4624.616963083461 4430.878562858483 4848.9680512187415 0.7140726887406391 0.7917551944838522 0.8575797982583974 0.9666332278194748 0.8796667112776123 0.9327479216379669 0.8945233415123739 0.880134503218624 0.9537321991472202 0.9137776359951112 1.0 12.243462032828145 -3.0844617084173236 0.2610231510175989 0.9853541634213967 1.1702612705327827e-25 0.6681433268576755 0.044724392815477264 9.36159344988337 0.1894283232114747 0.019095042027709407 3.7187337490132735 0.0008232624204624297 3.0844617084173236 -0.9853541634213967 TGS(ph)PGPELLFHEGQQK ddPTM_A549_MK2206_60min_R1 1 TGSPGPELLFHEGQQK 16 0 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 T(0.099)GS(0.901)PGPELLFHEGQQK 178.88 3.423e-29 33334000.0 1871.0 1799.8 1432.9 1387.9 1880.2 1604.6 1729.1 1777.5 1973.4 2242.9 2175.1 True False 2186.7790584418276 1891.4021324326488 1636.1067663558213 1727.9355623051993 1603.6250706858782 1774.397706952724 2043.255088167072 2029.4660683654486 1526.4280508722468 1736.2273322382975 1634.9626402939189 1.3375101085176528 1.156847310035555 1.000699787281804 1.056865471858468 0.9808328527908093 1.085283335057576 1.2497258578335184 1.2412920138655947 0.9336164712594529 1.0619370066622282 1.0 10.675041954465877 TGS(ph)PGPELLFHEGQQK ddPTM_A549_PD325901_60min_R1 2 TGSPGPELLFHEGQQK 16 0 A6NHN7;A6NHB5;Q14202-2;Q14202;A6NL54;Q14202-3 A6NHN7 ZMYM3 Zinc finger MYM-type protein 3 1 T(0.16)GS(0.84)PGPELLFHEGQQK;T(0.105)GS(0.895)PGPELLFHEGQQK 237.31 1.0360999999999997e-65 94779000.0 10320.7 9756.2 9764.9 9718.8 11821.5 11121.2 10550.8 11792.4 12004.1 11985.7 13235.5 True False 11368.449866302226 10578.389213386876 10427.604835113898 10319.108203003738 10991.198621961037 11030.632634422112 10952.31646761929 11557.191331041167 11499.609422382227 11228.920856507639 11607.617406747257 0.9793956389098414 0.9113316577127953 0.8983415346764063 0.8889945146715005 0.9468953219953727 0.950292574943954 0.9435456118025518 0.9956557772418673 0.9906950771566397 0.9673751695141597 1.0 13.50278425285337 -7.938532099267678 1.0595480604869352 0.9968633391850721 0.9203069895367705 0.5375166451213832 0.025360586699546758 0.20862812808295084 0.4694425399796155 0.004336254091973514 0.00667532833913043 1.1520409078433181e-08 7.938532099267678 -0.0765563496483016 TGS(ph)QGQCTQVR ddPTM_A549_MK2206_60min_R1 1 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 1 T(0.001)GS(0.998)QGQCTQVR 57.175 0.013755000000000002 1469500.0 361.6 513.63 315.36 224.28 430.96 491.48 293.66 263.27 346.81 503.15 601.3 True False 422.62923972878957 539.7715731088908 360.08279003278074 279.2286100683117 367.56635488925986 543.4880873819799 347.0142208033907 300.5893287305607 268.25808874176766 389.48806554714844 451.98061496424657 0.935060544050592 1.1942361137580841 0.7966775080857499 0.6177889069211514 0.8132347775984503 1.2024588431186853 0.7677635042618827 0.6650491609122184 0.5935168010756123 0.8617362175542826 1.0 8.82011708786945 TGS(ph)QGQCTQVR ddPTM_A549_PD325901_60min_R1 1 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 1 T(0.143)GS(0.856)QGQCT(0.001)QVR 44.61600000000001 0.054223 2683500.0 567.66 530.51 434.83 310.24 464.95 531.98 321.23 440.42 338.71 396.76 516.1 True False 625.2884253107948 575.2179395250068 464.3401786452059 329.4028201938387 432.2935159904226 527.647731257407 333.4545834338008 431.63547759719364 324.47519659575335 371.7085058885148 452.62297182745385 1.3814774420003662 1.27085449773479 1.025887344538533 0.7277642556759395 0.9550852318543365 1.1657555274471434 0.7367159958485675 0.9536313984561505 0.716877438380321 0.8212320828254719 1.0 8.822165996872963 -5.803880416971116 2.696441757858342 0.8805850910646321 1.3583078948981437 0.6314312635713227 0.12960233285518355 0.138837487962168 1.984460363026007 0.0199835977788925 0.08952223619212861 1.57079526342436e-06 5.803880416971116 0.4777228038335116 TGS(ph)SGALGPPER ddPTM_A549_MK2206_60min_R1 2 TGSSGALGPPER 12 0 Q9BZL4-3;K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-4;Q9BZL4 Q9BZL4-3;Q9BZL4-5 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 T(0.01)GS(0.947)S(0.042)GALGPPER;T(0.047)GS(0.891)S(0.062)GALGPPER 89.992 0.00027362 87340000.0 6145.2 7488.9 7607.6 6145.0 8667.8 7097.5 6775.9 6877.4 10995.0 10631.2 9614.0 True False 7182.359524284725 7870.053022321848 8686.472074623867 7650.52527585953 7392.778102165225 7848.552739060802 8006.99332132975 7852.2925111541645 8504.650055407095 8229.604536310937 7226.578467098399 0.9938810679196252 1.0890427687394661 1.2020172636569517 1.0586649422947942 1.0229983851726663 1.0860676009807635 1.1079923033818107 1.0865851034351255 1.1768570830757012 1.1387968142571447 1.0 12.819097027698641 -11.12947456250688 1.5080037993877236 1.0002876998601762 1.1036744542722514 0.0 0.070300802206565 0.4321104942400018 1.7675309616484338 0.04403069797975099 0.009595334507748823 7.422076690477681e-12 11.12947456250688 0.10338675441207523 TGS(ph)TSSKEDDYESDAATIVQK ddPTM_A549_MK2206_60min_R1 1 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.02)GS(0.834)T(0.113)S(0.028)S(0.005)KEDDYESDAATIVQK 301.8 3.6824999999999993e-147 292660000.0 9349.9 9166.7 8657.5 8619.1 9472.6 6674.2 6912.5 7737.8 10113.0 10153.0 9568.6 True False 10927.93453689216 9633.245875858642 9885.263681851859 10730.779886926099 8079.193088277338 7380.459414024601 8168.411773150704 8834.65684601866 7822.4216471425125 7859.430248435262 7192.452540074659 1.5193613688799852 1.3393548059141795 1.3743940091051678 1.4919500444579523 1.1232876467744441 1.0261394667399488 1.1356921338914965 1.22832327315252 1.08758752366565 1.0927330009679397 1.0 12.812268080929071 -5.217832317565097 0.2653132970637177 1.0033708724176866 1.920982196966468 0.6863658670852497 0.09815420869608776 3.5950986125294455 0.18488718485213418 0.05081410197787703 1.0811169412744834 6.055746438536373e-06 5.217832317565097 0.9176113245487814 TGS(ph)TSSKEDDYESDAATIVQK ddPTM_A549_PD325901_60min_R1 4 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.023)GS(0.775)T(0.126)S(0.026)S(0.051)KEDDYESDAATIVQK;T(0.065)GS(0.546)T(0.328)S(0.051)S(0.01)KEDDYESDAATIVQK;T(0.031)GS(0.888)T(0.031)S(0.039)S(0.01)KEDDYESDAATIVQK;T(0.019)GS(0.479)T(0.479)S(0.019)S(0.006)KEDDYESDAATIVQK 251.16 1.4120999999999999e-98 445669000.0 16538.9 16795.5 15822.400000000001 16922.2 19644.3 19976.3 19926.699999999997 26228.9 31930.7 43974.6 43522.3 True False 18217.916952705327 18210.91572881238 16896.203211820506 17967.445860895372 18264.552137155966 19813.619635921146 20685.021472808636 25705.744013326 30588.763721000327 41198.0362512478 38169.33301059093 0.4772919911293802 0.477108565762974 0.4426643558883326 0.4707298882039648 0.4785137883359937 0.5190978744748674 0.5419277687422286 0.6734658948898417 0.8013963385871268 1.0793491266880793 1.0 15.220126355971397 -8.77422607440134 0.6190743591021964 0.9694600590799781 0.45122797951695376 0.9614790380174169 0.042679280788446204 0.06533892660732578 0.05477041340698874 0.010320818002092105 0.01015933357967919 1.6817983636994717e-09 8.77422607440134 -0.5182320795630244 down TGS(ph)YGALAEITASK ddPTM_A549_MK2206_60min_R1 2 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.003)GS(0.997)YGALAEITASK;T(0.146)GS(0.853)Y(0.001)GALAEITASK 258.42 4.565099999999999e-70 188450000.0 6227.2 6445.7 6959.4 5997.5 10215.0 7170.1 7426.9 7805.3 10004.0 10647.0 10043.0 True False 7278.1991195772025 6773.758598189319 7946.347567713519 7466.887769238004 8712.387031728676 7928.835222872821 8776.271594649252 8911.725177728742 7738.109973105285 8241.83530533736 7549.0459273007355 0.9641217167928428 0.8972999586202502 1.0526293844598247 0.9891167494735181 1.1541043882407416 1.0503095754390097 1.1625669891489623 1.1805101285051065 1.0250447603081614 1.0917717794683415 1.0 12.882078608182265 -5.769659289291833 24.94186589900366 1.045918758961303 0.9307108344101094 0.3282711457468631 0.06980224949020061 160.28458280349167 486361.72064740036 0.01060478829621119 0.033791246680620904 1.6995764734970134e-06 5.769659289291833 -0.11520792455119366 TGS(ph)YGALAEITASK ddPTM_A549_PD325901_60min_R1 2 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.037)GS(0.963)YGALAEITASK;T(0.024)GS(0.976)YGALAEITASK 269.87 8.763199999999999e-84 588120000.0 20794.1 22294.0 25276.0 23666.0 26647.0 25837.0 26695.0 26166.0 26078.0 25607.0 27833.0 True False 22905.101724192653 24172.793620799806 26991.381356935424 25127.795070614335 24775.40664715946 25626.592038230054 27710.8928330645 25644.098603170096 24982.032348687826 23990.169649882042 24409.7174479239 0.9383599696743226 0.9902938726091545 1.1057637768449917 1.029417694990628 1.014981295871848 1.049852055555426 1.1352402129268142 1.0505692520972292 1.0234461911320731 0.9828122632334058 1.0 14.575167975002877 -3.9697856402188365 13.866528507768505 1.0256115838688717 0.5483356294404155 0.0 0.05320064459005634 0.0 0.0 0.006907597065407403 0.0 0.0001072048318034743 3.9697856402188365 -0.4772759544284563 TGSAQADGS(ph)DSEKP ddPTM_A549_MK2206_60min_R1 2 TGSAQADGSDSEKP 14 1 Q9NYQ6 Q9NYQ6 CELSR1 Cadherin EGF LAG seven-pass G-type receptor 1 1 TGSAQADGS(0.998)DS(0.002)EKP;TGSAQADGS(0.981)DS(0.019)EKP 138.91 1.2728e-09 13402400.0 5237.2 5405.4 5389.799999999999 5168.9 6899.3 5713.5 5793.200000000001 6045.6 8732.2 7922.6 8586.6 True False 6121.111322753365 5680.511771669876 6154.1546858152 6435.280732040741 5884.422109447448 6318.098777685643 6845.74945160458 6902.582313873501 6754.370642458015 6132.879157515333 6454.310241895894 0.948375750985801 0.8801113610555662 0.9534953318276614 0.9970516586371028 0.9117042548173131 0.9788960463465046 1.0606477214509764 1.069453133669932 1.046489925230799 0.9501990030950009 1.0 12.656047210749632 -7.543441484213108 5.312597221009676 1.0293264355949552 0.9393762257441528 0.5134145662959011 0.04036142666210525 0.09651545763488807 7.901534884623489 0.005543452291393095 0.008427525094331189 2.8612678549588447e-08 7.543441484213108 -0.08995020985080238 TGSAQADGS(ph)DSEKP ddPTM_A549_PD325901_60min_R1 2 TGSAQADGSDSEKP 14 1 Q9NYQ6 Q9NYQ6 CELSR1 Cadherin EGF LAG seven-pass G-type receptor 1 1 TGSAQADGS(0.949)DS(0.051)EKP;TGSAQADGS(0.992)DS(0.008)EKP 190.82 1.3423e-26 19560900.0 8165.7 8758.5 8190.0 7910.7 10431.900000000001 9815.8 9269.2 9888.099999999999 9009.2 10767.5 10194.900000000001 True False 8994.675852729382 9496.60953295842 8745.822650470842 8399.325972496776 9699.199332101289 9735.863379218123 9621.944478300858 9690.874088435614 8630.574654336928 10087.638212406948 8940.991930795792 1.0060042467713997 1.0621427249306528 0.9781714062784554 0.9394176884968058 1.0848012622284084 1.0889019310804349 1.076160738403044 1.0838701302320803 0.965281561725866 1.1282459810372627 1.0 13.126219180305036 -8.778870212906707 24.994174023664133 0.9836051795173129 1.0396002103905109 0.0 0.06377709535747833 279.2859934984571 400468.3149122207 0.008721022869271818 0.009294417058600788 1.6639098285842305e-09 8.778870212906707 0.055995030873198015 TGSCS(ph)ELDACPSK ddPTM_A549_PD325901_60min_R1 1 TGSCSELDACPSK 13 0 H0Y9Z7;A0A1B0GUA8;Q9H1H9;Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 H0Y9Z7;Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 T(0.001)GS(0.264)CS(0.735)ELDACPSK 179.46 1.5864e-22 16941000.0 6838.0 8403.3 9457.3 8207.0 7016.5 7277.4 7492.0 8193.7 5723.4 7729.9 8920.3 True False 7532.188726130459 9111.475582383913 10099.129249364829 8713.927750550658 6523.685245610934 7218.135267214279 7777.112159779704 8030.270225666703 5482.865401659637 7241.83279480701 7823.159650440677 0.962806469852136 1.164679744439405 1.2909271573917 1.1138629581795387 0.8338939171774995 0.9226624010936147 0.9941139523263622 1.0264740315269367 0.7008505062722054 0.9256915515458104 1.0 12.933535691601683 -6.70353387513555 6.019974674844391 0.8825481681553934 1.149985635682206 0.4447393743569438 0.1134664952697872 0.14431309932222347 10.584685003540217 0.019901215646323488 0.04152117843043931 1.9790926452343442e-07 6.70353387513555 0.26743746752681263 TGSEPALS(ph)PAVVR ddPTM_A549_MK2206_60min_R1 2 TGSEPALSPAVVR 13 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR 203.29 9.5137e-31 68994000.0 8352.2 9355.0 8720.0 8019.4 12186.5 9522.900000000001 8611.7 9695.400000000001 11810.8 12804.5 12374.1 True False 9761.84716831525 9831.129541564302 9956.62712165731 9984.15336000454 10393.881993358935 10530.606957210584 10176.334418349654 11069.752640917226 9135.672657971994 9911.954556888537 9301.269462213677 1.0495177252925167 1.0569664260887373 1.070458947792666 1.073418354404748 1.117469183704868 1.132168786206128 1.0940801639701894 1.1901335281047385 0.9821963222424188 1.0656561017994117 1.0 13.183211917211164 -8.799773093080505 24.999736642637394 0.9915926610282076 1.0965734227049473 0.37932808331494083 0.04380622396131256 76.33688875731447 49783.57978890377 0.006679632005286783 0.007111082635948192 1.5857214719120513e-09 8.799773093080505 0.10498076167673964 TGSEPALS(ph)PAVVR ddPTM_A549_PD325901_60min_R1 2 TGSEPALSPAVVR 13 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR 179.5 1.5396e-22 95873000.0 12351.8 13146.7 12486.5 12481.3 13520.3 12719.7 11905.599999999999 13178.400000000001 13059.0 14565.6 14454.3 True False 13605.74564308544 14254.618547347665 13333.908977424206 13252.241553911043 12570.68077050287 12616.11498040309 12358.674122994293 12915.546473745193 12510.175643895787 13645.925530219147 12676.512733357034 1.0733035125096524 1.124490531992919 1.0518593920816484 1.0454169717385313 0.9916513346311973 0.9952354599230581 0.9749269679249893 1.0188564272695568 0.9868783242710318 1.0764731450402125 1.0 13.629870298982377 -6.340509321095375 1.5035221056523564 0.99390274885458 1.0976394795380082 0.5354434829857802 0.030665970177667926 0.10368142203701945 0.4404108349256378 0.0023776325388740614 0.0086210171724998 4.565524512874724e-07 6.340509321095375 0.10373673068342826 TGSES(ph)PKVCSDQSSGSGTGK ddPTM_A549_MK2206_60min_R1 2 TGSESPKVCSDQSSGSGTGK 20 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 TGSES(1)PKVCSDQSSGSGTGK;TGS(0.006)ES(0.993)PKVCSDQSSGSGTGK 189.33 1.5504e-44 28146000.0 4321.9 5240.6 4782.3 3979.9 5853.3 4455.2 4527.4 4249.799999999999 7144.8 6375.9 7592.3 True False 5051.331059689863 5507.324155587591 5460.502050906167 4954.975678664501 4992.287323819621 4926.646306877588 5349.969976385174 4852.222164466653 5526.514207901104 4935.579761745134 5706.92237317986 0.8851234920294341 0.9650252439860937 0.9568208035504802 0.8682395439529381 0.874777506573644 0.8632755073085904 0.937452733110194 0.8502344779158134 0.9683878361257201 0.8648408790244436 1.0 12.478497223952932 -8.922836726248216 6.579651621943516 0.9862485509331116 0.9023088988741221 0.0 0.05182386010232851 0.1279184119643261 8.671077089088428 0.0066770995879889385 0.0070606201989482816 1.1944370707197349e-09 8.922836726248216 -0.08393965205898946 TGSES(ph)PKVCSDQSSGSGTGK ddPTM_A549_PD325901_60min_R1 2 TGSESPKVCSDQSSGSGTGK 20 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 TGS(0.004)ES(0.996)PKVCSDQSSGSGTGK;TGS(0.002)ES(0.998)PKVCSDQSSGSGTGK 211.3 5.6585999999999994e-67 47213000.0 6549.200000000001 6302.299999999999 5978.3 6289.0 6604.7 7295.200000000001 6384.5 7620.8 5153.4 6704.7 7124.099999999999 True False 7214.069962733785 6833.416938923771 6384.023388438321 6677.457246644699 6140.808656978052 7235.79030991585 6627.465641232455 7468.797165598051 4936.820519431242 6281.364097768736 6247.880863390746 1.1546426893323771 1.093717548131232 1.0217901922306647 1.0687555336996009 0.9828626363476166 1.1581191236077704 1.0607541638743263 1.1954128654022877 0.7901591959536842 1.0053591345786033 1.0 12.609151228629486 -8.761100744057396 24.999999811794197 0.900908511100443 1.0864721125770502 0.42817306349737827 0.0801076692650189 5.830573889631994 430444.6595184296 0.01563304504781736 0.01719329090247537 1.733401850826187e-09 8.761100744057396 0.18556360147660722 TGSESSQTGTSTT(ph)SSR ddPTM_A549_PD325901_60min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 TGSESSQT(0.002)GT(0.012)S(0.065)T(0.38)T(0.394)S(0.08)S(0.067)R 58.83 0.006611 4863800.0 235.67 227.97 228.64 257.41 301.08 202.61 296.72 282.03 156.31 326.01 131.17 True False 259.5950449089155 247.18183196078462 244.15688532401154 273.30963107947423 279.9331794696127 200.9600113351314 308.0118419714142 276.4046904017451 149.74083428266724 305.4256729627855 115.03692155513869 2.256623711757518 2.148717373685171 2.1224219322227253 2.375842706712848 2.4334202939830676 1.7469174993422323 2.6775042117567454 2.4027476280235884 1.3016762988645738 2.6550230033441133 1.0 6.845953163948999 -8.830988118786895 4.687439199214869 1.1313759878997767 2.26696191649859 0.012523757817537007 0.5119716088666252 0.05677641079685631 2.3488529581818263 0.04106201295937369 0.043715186932503314 1.4757469054757905e-09 8.830988118786895 1.1355859285988135 TGSESSQTGTSTTSSR ddPTM_A549_PD325901_60min_R1 2 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 109.22 1.5837e-06 4722300.0 741.74 734.16 679.86 1042.1100000000001 1110.48 796.71 898.1400000000001 875.86 954.27 1004.7 867.37 False True 817.040898759872 796.030239734744 725.9993879302947 1106.4787678964715 1032.4837157480258 790.2218579083584 932.3192091810658 858.3902852011224 914.1653504633149 941.263070536825 760.6889887114479 1.0740800917124884 1.0464595275437885 0.9543971303700414 1.4545744506841967 1.357300724829708 1.0388238421157339 1.2256246942135276 1.1284379002976939 1.201759673177135 1.2373822738400047 1.0 9.571162911366123 -10.806819079740093 0.915419810800973 0.9938328060170706 1.1683330223525472 0.0 0.15470916991332048 0.9661289537031984 1.3520291399835993 0.11743236410425757 0.02538439839013061 1.5602023232475865e-11 10.806819079740093 0.17450021633547663 TGSGQGPS(ph)STGQPGR ddPTM_A549_MK2206_60min_R1 1 TGSGQGPSSTGQPGR 15 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 T(0.01)GS(0.306)GQGPS(0.317)S(0.317)T(0.05)GQPGR 83.69200000000001 0.00021324 8963600.0 477.08 617.93 358.05 472.5 841.77 702.11 464.59 801.5 780.25 848.51 911.23 True False 557.5994405138573 649.3799976075711 408.8268739575002 588.2625212113312 717.9467480859764 776.4068141771013 548.999989249633 915.1150794908051 603.5246208032187 656.8310016842116 684.9464423313998 0.8140774315374459 0.9480741229886986 0.5968742206557753 0.8588445531726848 1.0481793958112275 1.1335292311825016 0.801522506461912 1.3360388826547727 0.8811267326960046 0.9589523517320716 1.0 9.419847374338872 -6.5716756450748814 6.574183436939274 0.9818886933333475 0.7904686121292359 0.30425229373847806 0.1535401177419202 0.20757032984441992 20.7797902557876 0.02118612811513215 0.044608344474188995 2.681170021979273e-07 6.5716756450748814 -0.19142008120411158 TGSGS(ph)PFAGNS(ph)PAREGEQDAASLKDVFK ddPTM_A549_MK2206_60min_R1 2 TGSGSPFAGNSPAREGEQDAASLKDVFK 28 2 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 T(0.112)GS(0.133)GS(0.755)PFAGNS(1)PAREGEQDAASLKDVFK;T(0.283)GS(0.343)GS(0.377)PFAGNS(0.996)PAREGEQDAASLKDVFK 81.91 1.0664e-06 9088800.0 2227.8 2152.2 2326.2 1885.6999999999998 3377.7 1703.8400000000001 2103.5 1770.73 3409.9 3127.3999999999996 3428.1 True False 2603.79817551935 2261.7377872105517 2656.0901388072502 2347.6965846522903 2880.844804412133 1884.1392178825433 2485.6787218549753 2021.7364001331932 2637.563094491373 2420.91816792637 2576.8081592531744 1.010474204751819 0.877728432785645 1.0307675133941883 0.9110870656869984 1.1179896315009636 0.7311911098685032 0.9646347606161684 0.7845894126317672 1.02357759347355 0.9395026786270402 1.0 11.331369418679035 TGSGS(ph)PFAGNS(ph)PAREGEQDAASLKDVFK ddPTM_A549_PD325901_60min_R1 1 TGSGSPFAGNSPAREGEQDAASLKDVFK 28 2 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 T(0.381)GS(0.415)GS(0.433)PFAGNS(0.771)PAREGEQDAASLKDVFK 70.378 6.4595e-05 8098500.0 2196.0 2724.7 2776.5 2025.1 2978.7 2643.1 2268.0 2700.7 2879.8 2576.9 3191.5 True False 2418.9363033902437 2954.3200313354823 2964.92998645083 2150.1858276642038 2769.4863879571394 2621.575469917013 2354.3099810972194 2646.8324198418363 2758.7720207742627 2414.194094223494 2798.965732585387 0.8642250511426903 1.0555041803268508 1.059294850213169 0.768207271218748 0.9894677722256294 0.9366229244598434 0.8411356929770477 0.9456465968938369 0.9856397985358694 0.8625307791794644 1.0 11.45067810893206 -8.754955866609281 4.175610231953966 0.9936224301501799 0.9339245474451963 0.0 0.0913525954452851 0.37592670300385916 14.854993544896232 0.014046106085340303 0.01539722203458398 1.7581022647938027e-09 8.754955866609281 -0.05969788270498366 TGSGS(ph)PFAGNSPAR ddPTM_A549_MK2206_60min_R1 3 TGSGSPFAGNSPAR 14 0 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.005)GS(0.013)GS(0.982)PFAGNSPAR;T(0.007)GS(0.006)GS(0.97)PFAGNS(0.017)PAR;T(0.102)GS(0.049)GS(0.841)PFAGNS(0.007)PAR 172.19 1.2691e-22 51627900.0 8977.0 9174.2 8515.0 8027.9 11229.9 7383.1 7411.0 7400.6 11660.1 11138.6 13258.2 True False 10492.098133421849 9641.127593823552 9722.55503909541 9994.73586038612 9577.996586158579 8164.374741494858 8757.482770462195 8449.657713386974 9019.105967353546 8622.382523906335 9965.823032294988 1.0528079918157716 0.9674191045316342 0.975589773929233 1.002901198224917 0.961084353507018 0.8192373790942903 0.8787515834952039 0.8478635117245442 0.9050036247007863 0.8651952273249149 1.0 13.282773240311343 -5.5293147244923295 0.8526684630703572 0.9327570736722514 1.067967893737051 0.3128219740202567 0.0591552532756637 2.1646900365589317 1.4708613209290042 0.010676715955682085 0.2496478137165639 2.955869630829591e-06 5.5293147244923295 0.13521082006479956 TGSGS(ph)PFAGNSPAR ddPTM_A549_PD325901_60min_R1 1 TGSGSPFAGNSPAR 14 0 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.01)GS(0.104)GS(0.886)PFAGNSPAR 193.19 5.424e-27 51020000.0 12575.0 12257.0 11712.0 13208.0 15585.0 13126.0 12325.0 13575.0 14337.0 15430.0 15030.0 True False 13851.604742774278 13289.940405945235 12506.84674997736 14023.828162455591 14490.363365331188 13019.106207911422 12794.034619498778 13304.235975618523 13734.465748260513 14455.74716669973 13181.405283020018 1.0508443102510168 1.008233956895706 0.9488249910719604 1.0639099444518836 1.0993033788284576 0.9876872706950551 0.9706123394885489 1.0093184823591406 1.0419576254098593 1.0966772401210734 1.0 13.686216565280002 -11.21510585251375 1.6705840234976481 0.9999967976258778 1.022238500703057 0.0 0.05013021062456794 1.2983313450412715 6.526284688962729 0.03113806118174316 0.006455864566391393 6.093883502216662e-12 11.21510585251375 0.02224170307717921 TGSGSPFAGNS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 TGSGSPFAGNSPAR 14 0 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR 221.6 7.653e-47 74665000.0 17970.300000000003 20927.1 17387.3 18815.8 30075.0 27603.0 27646.0 28785.0 36551.0 36302.0 36599.0 True False 21003.247308346967 21992.20000312884 19853.080590870664 23425.67184467337 25651.00734011159 30523.93113861151 32668.92034437967 32865.36190036536 28272.256859953133 28101.352987166047 27510.458218986296 0.7634641030388803 0.7994123481356977 0.7216557584333181 0.8515187809015184 0.9324093090680908 1.1095391758158892 1.1875091314121866 1.1946497451534044 1.0276912378159184 1.0214789140724652 1.0 14.747692549183714 -6.816871537148434 2.2483236830681306 1.0484295184667227 0.7689518748349045 0.7978560050056485 0.07078760170174948 0.13007900061962133 1.3399709539633247 0.01254617648551728 0.027435739836226873 1.5245036301723173e-07 6.816871537148434 -0.27947764363181826 TGSGSPFAGNS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 TGSGSPFAGNSPAR 14 0 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR 168.45 1.8137000000000002e-22 156034000.0 11539.4 11336.8 11766.3 13502.599999999999 12578.5 12405.7 12160.3 12942.900000000001 12392.1 13929.400000000001 15448.4 True False 12710.871393142701 12292.19192250306 12564.83187450978 14336.62493537045 11695.029553469261 12304.672092296729 12623.06687087148 12684.743705991374 11871.303131688572 13049.89530679373 13548.344735476137 0.9381862981283222 0.9072836691493492 0.9274071570978673 1.0581827681008302 0.863207261241737 0.9082048274190374 0.9317054678877611 0.9362578199517291 0.8762179707904644 0.9632095699943901 1.0 13.725828981106964 -11.066617437209421 1.394497426940882 0.9998021194119029 0.9221762290828652 0.13627735676305297 0.048788351662888106 0.4778796521099825 1.6653321139930295 0.03430382162844837 0.0076751207828120345 8.577931282324498e-12 11.066617437209421 -0.07762589032903766 TGSGSPFAGNS(ph)PAREGEQDAASLKDVFK ddPTM_A549_MK2206_60min_R1 2 TGSGSPFAGNSPAREGEQDAASLKDVFK 28 2 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 TGSGSPFAGNS(1)PAREGEQDAASLKDVFK;TGSGSPFAGNS(1)PAREGEQDAASLKDVFK 272.54 2.922899999999999e-153 85963000.0 6564.9 9514.2 10613.400000000001 10830.5 16290.0 14908.0 14263.3 12520.400000000001 23666.0 24817.0 25529.0 True False 7672.894623604895 9998.43214156613 12118.539712499743 13483.972986199613 13893.762579232509 16485.554664870502 16854.75698285432 14295.205042116877 18305.688786836232 19210.822463844957 19189.444735443634 0.3998497470556179 0.5210381164963386 0.6315211242207722 0.702676558498548 0.7240315064234351 0.8590949291211671 0.8783347936963982 0.7449514688516802 0.9539457258513024 1.001114035799162 1.0 14.228025345954462 -5.407256209937623 0.2865374462799526 1.0086029066207765 2.92428018546823e-16 0.9228729907814797 0.051956660583643205 1.3068091906428068 0.08252708253585708 0.023166828648345066 0.45623762407399876 3.915108390309863e-06 5.407256209937623 -1.0086029066207762 down TGSGSPFAGNS(ph)PAREGEQDAASLKDVFK ddPTM_A549_PD325901_60min_R1 2 TGSGSPFAGNSPAREGEQDAASLKDVFK 28 2 M0QY97;Q9UPT8 M0QY97 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 TGSGS(0.001)PFAGNS(0.999)PAREGEQDAASLKDVFK;TGSGSPFAGNS(1)PAREGEQDAASLKDVFK 198.39 9.6885e-78 208174000.0 11547.8 12729.900000000001 13497.2 12712.599999999999 16319.4 16740.2 14894.2 15841.5 16137.6 18160.8 16271.9 True False 12720.124154958956 13802.693348587938 14413.201157257026 13497.828429590618 15173.181642873662 16603.873361395614 15461.006931418973 15525.528855083654 15459.392792015684 17014.123988658477 14270.559456072739 0.8913542733985803 0.967214592467452 1.0099955227139736 0.9458513852340042 1.0632506517757312 1.1635054261541196 1.0834198181935781 1.08794114925024 1.0833067084442192 1.1922534670789122 1.0 13.800754274186565 -5.796394734366821 0.9381178919089658 1.055542005573656 0.885704807743196 0.4596966481148306 0.0640734230605464 0.7904345125444207 0.8540170348483007 0.008985265156446235 0.11225397173280792 1.598104835687119e-06 5.796394734366821 -0.16983719783045992 TGSNIS(ph)GASSDISLDEQYK ddPTM_A549_MK2206_60min_R1 1 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.136)GS(0.136)NIS(0.723)GAS(0.002)S(0.002)DISLDEQYK 89.26100000000001 5.7775999999999995e-06 2600700.0 851.77 739.18 921.41 685.42 1256.9 1525.6 760.29 899.72 1865.2 1470.5 1426.9 True False 995.5279522228732 776.8011047069484 1052.0797931383327 853.3479307696729 1072.0116750053626 1687.0379793886796 898.4248516468351 1027.2580652769398 1442.7351781123523 1138.3130286933963 1072.561349563419 0.9281780968781861 0.7242486455652551 0.9809040700250635 0.7956168951240169 0.9994875122450756 1.5729058110059442 0.8376442541142608 0.9577615916283765 1.3451306805896097 1.0613034202255573 1.0 10.06684445563124 -7.002008470416569 24.321421603835798 1.153701718348916 0.8616936758567666 0.2907508048671015 0.19649478601483517 53.899926925526636 652723.1532290664 0.02985135156817904 0.055765173420676245 9.953860032980027e-08 7.002008470416569 -0.2920080424921494 TGSNIS(ph)GASSDISLDEQYKHQLEETKK ddPTM_A549_PD325901_60min_R1 1 TGSNISGASSDISLDEQYKHQLEETKK 27 2 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.032)GS(0.187)NIS(0.781)GASSDISLDEQYKHQLEETKK 268.22 9.155699999999999e-139 94775000.0 4076.6 3937.6 4383.9 4670.8 5300.9 5892.7 5328.1 5733.3 5638.2 6411.9 6361.4 True False 4490.453430965696 4269.435371008401 4681.417816532249 4959.304707843546 4928.58307111223 5844.711804918459 5530.8637611481945 5618.944833813162 5401.246061368654 6007.0515397383 5578.988128237093 0.8048867156103154 0.7652705603368081 0.8391159308689069 0.8889254814404199 0.8834188132014568 1.0476293676511788 0.9913739972226638 1.0071619986738876 0.9681408056832335 1.0767277867709804 1.0 12.445787766080036 -6.626423532991154 1.2253096203722933 0.9903539285056003 0.7886945563741853 0.8262146342460731 0.04095766695125323 0.11623782834295501 0.33768030236241203 0.00487938662207739 0.015736886021704897 2.363613528194473e-07 6.626423532991154 -0.20165937213141505 TGSPGS(ph)PGAGGVQSTAK ddPTM_A549_MK2206_60min_R1 2 TGSPGSPGAGGVQSTAK 17 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 TGS(0.004)PGS(0.996)PGAGGVQSTAK;TGSPGS(1)PGAGGVQSTAK 228.46 9.295999999999998e-64 19320000.0 4251.1 4657.5 4653.9 3660.1000000000004 6175.7 4669.200000000001 4275.8 3770.5 6317.799999999999 6306.1 6071.9 True False 4968.581750583677 4894.546856209061 5313.893000169836 4556.824664308133 5267.2627109003215 5163.291644835886 5052.657513148327 4304.979921671966 4886.828387453475 4881.547630223345 4564.079654085164 1.0886273087141358 1.0724060987472261 1.1642857712646486 0.998410415609084 1.1540689712077572 1.1312886794634238 1.107048495226382 0.9432306725450581 1.0707149650816083 1.0695579394312333 1.0 12.156108254980808 -9.465486791674 0.29784491637468846 0.9895992521662733 1.1073290261578668 0.12707319372914871 0.06136709161909526 1.9662441398780022 0.44190337318377837 0.08573148833376242 0.041812769120737246 3.42383800487481e-10 9.465486791674 0.11772977399159346 TGSPGS(ph)PGAGGVQSTAK ddPTM_A549_PD325901_60min_R1 2 TGSPGSPGAGGVQSTAK 17 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 TGSPGS(1)PGAGGVQSTAK;TGSPGS(1)PGAGGVQSTAK 250.27 5.832899999999998e-86 32289000.0 10530.5 9902.1 12387.2 11454.2 14013.0 12955.8 12931.6 12343.5 13862.2 13663.2 14264.1 True False 11599.548607855626 10736.584718422968 13227.869882284804 12161.699919624378 13028.775222225608 12850.292260281798 13423.719114443038 12097.299209211582 13279.619941099023 12800.503220223694 12509.706127579891 0.9272438928267339 0.8582603467200752 1.057408523220349 0.9721811044634956 1.0414933084240352 1.0272257500878477 1.0730643052316027 0.9670330450481899 1.061545315746604 1.0232457173396494 1.0 13.610760278304745 -5.7624294726724425 24.999949122615448 1.0267338578896585 0.8927520978201683 0.668004650040575 0.035883405101056934 9.997671501897926 252478.0916317128 0.004837195863401589 0.016404859225765105 1.7281065938915372e-06 5.7624294726724425 -0.13398176006949025 TGSQGQCTQVR ddPTM_A549_PD325901_60min_R1 2 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ; 101.93 0.00066443 7578000.0 1290.47 1756.48 1827.81 1253.65 1411.5300000000002 1372.06 1406.79 1565.38 1056.11 1562.32 1768.05 False True 1421.4775644061958 1904.5047339670962 1951.856178114422 1331.0851132542743 1312.389002314145 1360.8863982650432 1460.3261632750261 1534.1572678831458 1011.7253694214552 1463.6748485728012 1550.5910585923843 0.9167327236470738 1.2282443674710675 1.2587820414018789 0.8584372429327847 0.8463798337038797 0.8776565495614597 0.9417867820034381 0.9894015958507093 0.6524772368672707 0.9439464006077237 1.0 10.598602535489912 -6.277251620893883 23.73472550661167 0.8560857168136873 1.1439521609906886 0.423508938371034 0.12339508985197102 284.77050613718967 427450.5023607092 0.020987524892999612 0.04894825421295918 5.281391706246386e-07 6.277251620893883 0.28786644417700136 TGSS(ph)SPPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_A549_MK2206_60min_R1 1 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 T(0.021)GS(0.089)S(0.445)S(0.445)PPGGPPKPGSQLDSMLGSLQSDLNK 106.94 3.8679e-15 38287000.0 838.37 1255.3 1292.6 946.46 1676.9 1137.0 998.02 797.09 1522.1 1552.2 1874.4 True False 979.866359821419 1319.1894081801893 1475.9101166805324 1178.3427424882047 1430.230231375997 1257.3165853204837 1179.347315419873 910.0799484857466 1177.346780294237 1201.5569419502815 1408.9347491917254 0.6954661032979325 0.9363026988559825 1.0475361740685503 0.8363359219894277 1.0151145978878642 0.8923880868448865 0.8370489237322299 0.645934773777025 0.8356290317700339 0.8528123411248023 1.0 10.46038908353652 -10.748953208081948 1.1500619304245996 0.9956737436843668 0.8651993941567492 0.0 0.12073170374067453 0.7021059743374266 1.7284750826520192 0.06740748815902675 0.019720803166925555 1.782570815511712e-11 10.748953208081948 -0.1304743495276176 TGSS(ph)SPPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_A549_PD325901_60min_R1 1 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 T(0.075)GS(0.064)S(0.431)S(0.431)PPGGPPKPGSQLDSMLGSLQSDLNK 147.27 1.3951999999999998e-36 102370000.0 1736.5 2147.7 2401.0 2107.7 3017.8 2396.9 1924.2 2421.2 2809.7 2233.3 2631.7 True False 1912.788201656266 2328.6942163538065 2563.9462983858984 2237.8878420659935 2805.840138844819 2377.380441089663 1997.4264839626412 2372.907266605343 2691.618079994946 2092.289056862639 2308.0175837208085 0.8287580714929459 1.0089586113983 1.1108868131985812 0.9696147281764824 1.215692704698315 1.0300530021339929 0.865429491547696 1.0281148997053673 1.1662034548522489 0.9065308131186814 1.0 11.172438499915057 -5.29936363741395 3.0875790265224263 1.0627226909093705 0.8022567733992921 0.20095179491053938 0.10219280459548323 0.2932208372853083 4.33339791101035 0.013509202335725414 0.17612967771705962 5.019221510560165e-06 5.29936363741395 -0.2604659175100784 TGSSLLKEEEEDGQEGS(ph)IHNLPLVTSQR ddPTM_A549_PD325901_60min_R1 2 TGSSLLKEEEEDGQEGSIHNLPLVTSQR 28 1 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQR 103.53 5.5163e-15 25086000.0 3359.3 3650.0 3480.6 3385.9 3898.0 3586.9 3717.2 4190.8 3616.5 3958.8 4097.8 True False 3700.333663014046 3957.5983096761115 3716.8144465480887 3595.0393530631727 3624.217927369969 3557.6894756329043 3858.660080129888 4107.211206381001 3464.5110817175237 3708.8406923869634 3593.7965780944364 1.029644717669607 1.1012304741451382 1.0342306153897227 1.000345811161464 1.0084649613895684 0.9899529364901679 1.0737001931745096 1.142861349308423 0.9640253716181496 1.032011860380124 1.0 11.811293034055266 TGSSLLKEEEEDGQEGS(ph)IHNLPLVTSQRPFYDGPMPTPR ddPTM_A549_MK2206_60min_R1 8 TGSSLLKEEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPR 39 2 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(0.697)IHNLPLVT(0.099)S(0.099)QRPFY(0.093)DGPMPT(0.012)PR;TGSSLLKEEEEDGQEGS(0.999)IHNLPLVTSQRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(0.998)IHNLPLVTSQRPFYDGPMPTPR;T(0.002)GS(0.002)S(0.002)LLKEEEEDGQEGS(0.992)IHNLPLVT(0.001)S(0.001)QRPFY(0.001)DGPMPTPR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR 108.85 4.9538e-15 161438900.0 6449.41 8280.699999999999 8638.63 6764.969999999999 10352.850000000002 8252.860000000002 8008.179999999999 8817.38 11481.09 9180.39 11117.410000000002 True False 7537.912735064303 8702.152260270605 9863.717632105783 8422.38795369104 8829.95947933747 9126.172167394905 9463.162646439065 10067.270617093749 8880.641446533324 7106.53352294224 8356.650272093246 0.902025631039857 1.0413445551659797 1.180343476266482 1.0078665110370029 1.056638628138457 1.0920849706815483 1.1324109946351326 1.2047016794172976 1.0627034945078329 0.850404563019021 1.0 13.028709044638003 -3.6814074171040434 16.613390196518125 1.0543580036197773 0.4536843728196749 0.0 0.10275910091802078 0.0 0.0 0.011067235240632588 0.0 0.0002082536312985379 3.6814074171040434 -0.6006736308001024 TGSSLLKEEEEDGQEGS(ph)IHNLPLVTSQRPFYDGPMPTPR ddPTM_A549_PD325901_60min_R1 7 TGSSLLKEEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPR 39 2 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(0.998)IHNLPLVT(0.001)S(0.001)QRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;T(0.002)GS(0.002)S(0.002)LLKEEEEDGQEGS(0.982)IHNLPLVT(0.004)S(0.004)QRPFY(0.004)DGPMPT(0.001)PR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR 131.41 7.9385e-30 434641300.0 11226.240000000002 13031.300000000001 12783.750000000002 14428.820000000002 14800.5 14521.000000000002 13386.03 16668.379999999997 14877.17 13529.179999999998 14628.800000000003 True False 12365.919620478911 14129.493384351334 13651.332149933663 15320.055441172197 13760.963938953124 14402.745790422206 13895.44269676668 16335.916084808847 14251.934281652286 12674.94526589569 12829.550339603677 0.9638622783455179 1.1013241314260913 1.0640538279656786 1.1941225557906385 1.0725990837320507 1.122622805100364 1.083081037834404 1.273303868989183 1.1108677938351306 0.9879492991090472 1.0 13.647182986127302 -10.43805969978182 1.0315708401915256 1.0065606739583328 1.1117775721314036 0.2577730708725582 0.07415440771767406 0.5305033433128112 1.090263735901574 0.03465840271240299 0.013012795040268466 3.647038098979978e-11 10.43805969978182 0.10521689817307078 TGSSS(ph)PPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_A549_MK2206_60min_R1 9 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 T(0.16)GS(0.16)S(0.143)S(0.536)PPGGPPKPGS(0.001)QLDSMLGSLQSDLNK;T(0.006)GS(0.029)S(0.14)S(0.826)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.054)GS(0.05)S(0.226)S(0.496)PPGGPPKPGS(0.118)QLDS(0.041)MLGS(0.013)LQS(0.001)DLNK;T(0.059)GS(0.104)S(0.15)S(0.685)PPGGPPKPGS(0.002)QLDSMLGSLQSDLNK;T(0.012)GS(0.019)S(0.125)S(0.844)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.036)GS(0.052)S(0.174)S(0.586)PPGGPPKPGS(0.065)QLDS(0.084)MLGS(0.003)LQSDLNK;T(0.004)GS(0.021)S(0.131)S(0.844)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.006)GS(0.026)S(0.145)S(0.823)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.003)GS(0.021)S(0.132)S(0.844)PPGGPPKPGSQLDSMLGSLQSDLNK 280.5 2.614799999999999e-168 438685000.0 60356.14 75004.07 68679.57 64863.84 97129.3 74868.09 72415.48999999999 70897.06 109331.9 101070.04000000001 100116.78 True False 70542.7808660518 78821.45679471467 78419.36575295434 80755.48371184843 82841.7086364058 82790.58159038407 85572.44717171467 80946.93536814021 84568.39921716816 78238.2477678088 75255.0204434396 0.9373830536538166 1.0473913412056748 1.0420482951286023 1.0730909809870144 1.1008130507208915 1.1001336668642336 1.1370995139922853 1.0756350193138087 1.1237575741638173 1.039641572174063 1.0 16.1995002102889 -4.622412607065637 1.1949193886017215 1.072604696139636 0.5542211178603538 0.5375947365620939 0.03736140206700033 4.9372796965456995 1.9613818372425442 0.007422443888913086 4.6252333418272515 2.3855437893534683e-05 4.622412607065637 -0.5183835782792823 TGSSS(ph)PPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_A549_PD325901_60min_R1 8 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 T(0.034)GS(0.04)S(0.17)S(0.756)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.006)GS(0.026)S(0.145)S(0.822)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.03)GS(0.026)S(0.141)S(0.803)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.005)GS(0.023)S(0.138)S(0.834)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.011)GS(0.017)S(0.118)S(0.854)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.003)GS(0.004)S(0.135)S(0.858)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.002)GS(0.019)S(0.126)S(0.852)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.011)GS(0.011)S(0.098)S(0.88)PPGGPPKPGSQLDSMLGSLQSDLNK 259.53 2.2003999999999996e-139 633185000.0 55174.5 59741.9 58089.1 60494.0 67679.4 69330.7 66453.5 67169.1 66805.9 69476.2 70624.4 True False 60775.774622679855 64776.559577216285 62031.375644135034 64230.57698815786 62925.83242525485 68766.0937657204 68982.42430725052 65829.35960736056 63998.28034677521 65089.46087511756 61938.04652495802 0.9812349280048761 1.0458282624576234 1.0015068140571628 1.0370132833019856 1.0159479666492033 1.1102399514329373 1.11373264378711 1.0628258929805694 1.0332628156263697 1.050880105637327 1.0 15.918538261864608 -5.251757608273877 23.081721745697664 1.03283252593183 0.9812348468433183 0.10464628666537168 0.03848609301043698 841.4739266217148 2005977.815338152 0.005955740697786366 0.10171725788370023 5.600701048482096e-06 5.251757608273877 -0.05159767908851176 TGST(ph)SSKEDDYESDAATIVQK ddPTM_A549_MK2206_60min_R1 1 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.002)GS(0.016)T(0.894)S(0.03)S(0.058)KEDDYESDAATIVQK 282.58 7.072899999999998e-128 287900000.0 11565.0 10675.0 11195.0 8124.9 12718.0 9071.8 8682.3 7911.1 12892.0 10821.0 11634.0 True False 13516.889262896706 11218.311903388458 12782.619337953392 10115.500864740621 10847.199047432732 10031.771854626526 10259.76152448845 9032.522651727646 9971.98258429361 8376.52858448911 8744.956717934552 1.5456782347676643 1.282832181476832 1.4617132766064147 1.1567239485582925 1.2403948238173446 1.1471494002998226 1.1732203892384359 1.032883631453926 1.1403124001566087 0.9578696447187837 1.0 13.094235528388694 -2.0000000000234515 0.21448854705645912 1.0184233569956662 3.5396095619913504 0.8056470504393989 0.07654781715824947 13.765836810201703 0.1580924436642601 0.04592856646922877 12.083876009794402 0.00999999999946001 2.0000000000234515 2.521186204995684 TGSVQTPPDLES(ph)SEEVDAAEGAPEVVGPK ddPTM_A549_MK2206_60min_R1 1 TGSVQTPPDLESSEEVDAAEGAPEVVGPK 29 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 T(0.005)GS(0.005)VQT(0.022)PPDLES(0.484)S(0.484)EEVDAAEGAPEVVGPK 44.596000000000004 0.010643000000000001 2577000.0 547.03 541.44 608.89 395.13 902.26 399.7 467.79 887.73 1005.3 740.72 618.58 True False 639.3552904005518 568.9969833227767 695.2397578103119 491.93686773805973 769.5387492165949 441.9959887006129 552.781387828162 1013.5684460591053 777.6011551342203 573.3908375476182 464.96951406050835 1.3750477634913285 1.2237296556365862 1.4952372935999358 1.0579981114074546 1.6550305470488367 0.9505913298287642 1.1888551208461084 2.179860002449979 1.6723701912057571 1.2331794240449934 1.0 8.860992318134024 -6.738430929733556 24.99016853753336 1.3720189965100908 1.2982149663708518 0.020710299082189243 0.3437377099648373 1699.5022078913216 1845871.0099981904 0.055908530758615536 0.11632127452570666 1.8262871789952413e-07 6.738430929733556 -0.07380403013923909 TGT(ph)LSR ddPTM_A549_MK2206_60min_R1 2 TGTLSR 6 0 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;Q9P2A4-2;Q9P2A4 B6VEX4 ABI1;ABI3 Abl interactor 1;ABI gene family member 3 1 T(0.027)GT(0.862)LS(0.11)R;T(0.023)GT(0.975)LS(0.002)R 75.738 0.048342 7718800.0 1700.83 1571.48 1613.52 1732.7800000000002 1833.13 1422.53 1314.69 1713.8200000000002 2380.2 2406.6 3158.4 True False 1987.8885226988853 1651.4616196662187 1842.3413983184057 2157.31117778745 1563.4790053326276 1573.0611804010086 1553.5521553769981 1956.7592333536284 1841.0885003983587 1862.9473885437094 2374.082112594507 0.8373293038825975 0.6956211037963741 0.7760226103995238 0.9086927391192212 0.6585614697311312 0.6625976296505998 0.6543801274334207 0.8242171671203028 0.7754948704728379 0.7847021712773843 1.0 11.213154119129781 -10.38285862692433 0.6375706066243355 1.0113680895644763 0.7468762173819365 0.10408281627142213 0.09955631747478128 0.4811378515017465 0.33794742340442097 0.06679671179502257 0.017294040945555852 4.1413446339526093e-11 10.38285862692433 -0.2644918721825398 TGT(ph)LSR ddPTM_A549_PD325901_60min_R1 1 TGTLSR 6 0 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0;Q9P2A4-2;Q9P2A4 B6VEX4 ABI1;ABI3 Abl interactor 1;ABI gene family member 3 1 T(0.031)GT(0.963)LS(0.007)R 75.738 0.048342 3435300.0 720.14 1010.4 893.76 926.87 1085.8 1282.6 1012.3 935.76 965.63 1283.3 1205.1 True False 793.2480826609512 1095.549953999108 954.4159282154852 984.1206548255004 1009.5371538066482 1272.154930844675 1050.8236304518146 917.0955327104816 925.0479291687791 1202.2722189906524 1056.8803397583106 0.7505561914817649 1.0365884507319347 0.9030501300021749 0.9311561752114256 0.9552047813071356 1.2036887081612226 0.994269257286136 0.8677382842793772 0.8752626899846777 1.137567020373934 1.0 10.045596328355535 -5.246948784378777 24.096654164817654 0.9575769227376875 0.7505559514332663 0.2556211025521833 0.10482877290736767 1594.7715534733993 2651899.0410063504 0.013043594863477304 0.37769301264471833 5.663060686272258e-06 5.246948784378777 -0.2070209713044212 TGT(ph)PSDPR ddPTM_A549_MK2206_60min_R1 1 TGTPSDPR 8 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 T(0.071)GT(0.727)PS(0.202)DPR 79.906 0.0042468 188850000.0 736.78 940.07 945.89 714.7 947.54 1002.1 897.96 805.54 1158.3 1300.0 1265.6 True False 861.1304514584549 987.9155476363823 1080.0314252413345 889.8015320841024 808.1581211986481 1108.141556859856 1061.1077086174912 919.7277618627871 895.9468994250147 1006.329097110788 951.3165912169479 0.9051986051845005 1.038471899636078 1.1353017861905796 0.9353369217978698 0.8495154280499114 1.164850447359794 1.1154096527004704 0.9667946195348579 0.9417967769056746 1.0578277582896634 1.0 9.893781729146175 TGT(ph)PSDPR ddPTM_A549_PD325901_60min_R1 2 TGTPSDPR 8 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 T(0.066)GT(0.79)PS(0.144)DPR;T(0.04)GT(0.745)PS(0.215)DPR 101.64 0.0024158 446130000.0 2249.3 2282.16 2241.33 1801.4699999999998 2250.6800000000003 2513.78 2027.9900000000002 1905.12 2164.48 2646.7 2551.6000000000004 True False 2477.6472801528585 2474.485632441216 2393.440132012188 1912.7427104647845 2092.6000012244867 2493.3086091211026 2105.166269208709 1867.1208870622722 2073.5144327819557 2479.5869103113505 2237.769375925075 1.1071950965137414 1.1057822396994257 1.0695651472228946 0.8547541721872357 0.9351276426148354 1.1141937305717171 0.9407431757074836 0.8343669848866442 0.9265988064229284 1.1080618659759387 1.0 11.127845644768326 -6.071413327227059 7.494279237267066 0.9561116675387609 1.1020609679396356 0.3264485849207588 0.08350305452304149 0.19320482497662067 18.053057953999645 0.010146513127680635 0.027162681497765125 8.483726765111296e-07 6.071413327227059 0.14594930040087473 TGT(ph)PSDPRR ddPTM_A549_MK2206_60min_R1 2 TGTPSDPRR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 T(0.191)GT(0.78)PS(0.029)DPRR;T(0.133)GT(0.774)PS(0.093)DPRR 83.081 0.00090259 42976000.0 2927.0 3462.3 3119.0 2583.6000000000004 4393.6 3234.6 2873.3 3005.7 4904.1 4431.700000000001 4624.8 True False 3421.006041720595 3638.5162813210172 3561.321100051507 3216.5821159822117 3747.3072601667263 3576.8832250462933 3395.341417402375 3431.7671795701986 3793.3291802384642 3430.5758920506787 3476.3345220133865 0.98408424737538 1.0466530934467435 1.0244471806438522 0.9252798013579159 1.0779478316708142 1.0289237708270584 0.9767015791782596 0.9871797888951792 1.091186465576818 0.9868371039458522 1.0 11.763351201690261 -8.725112202436645 24.998671380432476 1.0430603539573904 1.007786842984738 0.0 0.04597335135293173 305.49460581140926 210226.8822762264 0.008149113196723921 0.009240089459365771 1.8831625009489734e-09 8.725112202436645 -0.0352735109726523 TGT(ph)PSDPRR ddPTM_A549_PD325901_60min_R1 3 TGTPSDPRR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 T(0.177)GT(0.803)PS(0.02)DPRR;T(0.183)GT(0.802)PS(0.015)DPRR;T(0.092)GT(0.884)PS(0.024)DPRR 81.09 0.0010009 56600000.0 4616.0 4438.5 5118.3 5084.5 5247.6 5235.9 5134.2 6061.1 5798.799999999999 5662.700000000001 5488.2 True False 5084.612921880401 4812.547971917104 5465.658616838212 5398.5580172626815 4879.026679237215 5193.260566357113 5329.58479054204 5940.206605659037 5555.096601870199 5305.156155597571 4813.18619256623 1.0563923186128512 0.9998674016288606 1.135559356768641 1.1216183628218113 1.0136791896338175 1.0789652339603841 1.1072883070206938 1.234152673094892 1.154141223634735 1.1022129507042902 1.0 12.232776518040973 -7.523392856883269 23.12220931345974 1.0917232897617055 1.0665519783153488 0.06987416464601193 0.06611800783382923 30.300133483776843 1362681.090094681 0.01277469221003159 0.01906039974571187 2.9964507440545855e-08 7.523392856883269 -0.02517131144635676 TGTCRIS(ph)MSEVDLNVAAPK ddPTM_A549_MK2206_60min_R1 2 TGTCRISMSEVDLNVAAPK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 T(0.157)GT(0.126)CRIS(0.708)MS(0.01)EVDLNVAAPK;T(0.086)GT(0.077)CRIS(0.83)MS(0.007)EVDLNVAAPK 185.9 4.814e-44 13324100.0 4625.4 5685.4 4965.7 5135.5 5571.9 4340.4 4187.8 4384.8 7597.200000000001 7281.8 7725.9 True False 5406.054439827271 5974.76257569318 5669.910928671293 6393.697730541356 4752.280891051299 4799.698247075662 4948.6690522387735 5006.358827886819 5876.4463302354525 5636.836322570259 5807.345806007443 0.930899350652573 1.0288284485336747 0.9763343045296219 1.1009672824937269 0.8183223541011238 0.8264874191081555 0.852139551793109 0.8620734833300201 1.0118988134229114 0.9706389994443245 1.0 12.503663228425118 -8.793994935559773 24.90127739237347 1.005618910385177 0.9263745152509947 0.11790796282069216 0.08316941319572838 264.0902935082804 201997.76189458586 0.01537874715699988 0.016372547314277806 1.6069599921535165e-09 8.793994935559773 -0.07924439513418224 TGTCRIS(ph)MSEVDLNVAAPK ddPTM_A549_PD325901_60min_R1 4 TGTCRISMSEVDLNVAAPK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 T(0.2)GT(0.163)CRIS(0.629)MS(0.007)EVDLNVAAPK;T(0.086)GT(0.07)CRIS(0.797)MS(0.046)EVDLNVAAPK;T(0.128)GT(0.128)CRIS(0.71)MS(0.035)EVDLNVAAPK;T(0.214)GT(0.214)CRIS(0.527)MS(0.045)EVDLNVAAPK 152.96 3.6235000000000003e-22 42792000.0 15841.7 16117.599999999999 16747.399999999998 18182.699999999997 18434.1 19334.1 17579.5 20236.6 17240.2 17715.8 20022.4 True False 17449.937721956838 17475.88671672213 17883.97927429737 19305.804083092167 17139.352410192612 19176.649499800424 18248.497492371513 19832.96513769441 16515.654348410462 16597.22136460266 17559.77173245109 0.9937451344944722 0.995222886891295 1.0184630840756963 1.0994336587766884 0.9760578139246807 1.0920785185584894 1.0392217945890283 1.129454610223798 0.9405392393506425 0.9451843462139317 1.0 14.09998647028825 -8.800328174047584 24.999997751890024 0.9719213053654993 1.0417172016415954 0.35588646665830526 0.048029005915618685 141.07691965119758 90691.93166650535 0.008350602300749159 0.008889973390423241 1.5836960224052837e-09 8.800328174047584 0.06979589627609617 TGTGDIATCYS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TGTGDIATCYSPR 13 0 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 TGTGDIAT(0.028)CY(0.041)S(0.93)PR;TGT(0.001)GDIAT(0.022)CY(0.027)S(0.95)PR 53.448 0.02195 5490800.0 5122.9 5774.6 4326.4 4811.5 6778.8 5360.5 4424.4 4861.6 8077.5 6407.200000000001 6926.9 True False 5987.520277120064 6068.502474689176 4939.94857558924 5990.317715996444 5781.647499822057 5927.744551988086 5228.256209638771 5550.746688025578 6247.9591471169415 4959.809070006341 5206.759557285618 1.1499513682635791 1.1655046498541985 0.9487568076150089 1.1504886388722182 1.1104118475630436 1.1384709600606813 1.004128604771671 1.0660654917814731 1.1999707454081325 0.9525711751114513 1.0 12.346170070779353 -11.153927924723831 1.550055036879947 1.0002091987809196 1.1140319831211916 0.2926996047747211 0.07248838593884009 0.4657867095683236 2.012994237324132 0.053553310379028975 0.011498583323144781 7.015717212205069e-12 11.153927924723831 0.11382278434027193 TGTGT(ph)PVKR ddPTM_A549_MK2206_60min_R1 2 TGTGTPVKR 9 1 Q9H582;Q9H582-2;A0A087WZL9 Q9H582 ZNF644 Zinc finger protein 644 1 T(0.007)GT(0.009)GT(0.984)PVKR;T(0.001)GT(0.003)GT(0.996)PVKR 78.342 0.0011365 82994000.0 8371.2 9309.8 9309.3 6983.1 11148.3 8790.7 8531.1 9138.099999999999 12278.400000000001 12401.400000000001 12778.3 True False 9784.053903809845 9783.629054629117 10629.498722894996 8693.959813483269 9508.39983806371 9720.926039205608 10081.090441652948 10433.453659257555 9497.362004575763 9599.915126853644 9605.095446861194 1.0186316167224692 1.01858738507656 1.10665206626016 0.9051403873684908 0.9899328841308824 1.0120592859264366 1.0495565085662217 1.0862415388768527 0.9887837197577629 0.9994606695960275 1.0 13.229584234839109 TGTGT(ph)PVKR ddPTM_A549_PD325901_60min_R1 1 TGTGTPVKR 9 1 Q9H582;Q9H582-2;A0A087WZL9 Q9H582 ZNF644 Zinc finger protein 644 1 T(0.028)GT(0.04)GT(0.932)PVKR 53.211000000000006 0.01379 58578000.0 4712.2 5167.6 5145.4 4456.1 5148.7 4941.3 4771.9 4636.4 5615.6 6061.1 6061.8 True False 5190.579075061708 5603.091787693781 5494.5977858037495 4731.343176462628 4787.073074050736 4901.059691082796 4953.4972657838725 4543.92336481456 5379.595860775039 5678.401111606206 5316.237028916218 0.976363365069874 1.053958233468014 1.0335501889621148 0.889979726398161 0.9004626859210303 0.9219039076746995 0.9317675714684425 0.8547255022865103 1.0119179847539148 1.0681241413278029 1.0 12.376189714486589 TGTITTFEHAHNMR ddPTM_A549_MK2206_60min_R1 2 TGTITTFEHAHNMR 14 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 89.62899999999999 7.0688e-05 6251000.0 952.5600000000001 1212.6399999999999 962.27 1116.18 1589.65 1149.49 907.48 1164.81 2006.27 1514.35 1601.82 False True 1113.328840143959 1274.3581963957824 1098.7343555455482 1389.644150107225 1355.814590796621 1271.1282688302917 1072.3573693886153 1329.9253845810163 1551.853048354852 1172.257283238248 1204.0438860170125 0.9246580237426897 1.0583984613811463 0.9125368006146112 1.1541474245628869 1.126050808066197 1.0557158950702328 0.8906298033172052 1.1045489288437988 1.2888675125359386 0.9736001294073134 1.0 10.233672262295608 -8.508152977714204 24.599082224401887 1.139583265499768 1.0238728451132078 0.040355519850576504 0.11238346684968574 804.2994894700961 1343567.0985635198 0.021090214583753514 0.02504268990306436 3.103466217584601e-09 8.508152977714204 -0.11571042038656021 TGTITTFEHAHNMR ddPTM_A549_PD325901_60min_R1 2 TGTITTFEHAHNMR 14 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 54.898 0.037703 21518000.0 2273.7 2226.42 2479.2 2271.2 3054.2 2494.2 2713.2 3456.6000000000004 2821.3999999999996 3205.0 2611.0 False True 2504.524350190526 2414.0482270216694 2647.453420640697 2411.4868657305524 2839.6835284180006 2473.8880621493745 2816.4523107200075 3387.655401349759 2702.826369682793 3002.635753031278 2289.8635524926995 1.0937439252501098 1.05423234689848 1.1561620856224086 1.053113781869429 1.2401103661075257 1.0803648363485894 1.2299651250634887 1.479413652251037 1.1803438535630433 1.3112727829405681 1.0 11.161045918789117 -4.437767132257882 16.42356706946172 1.1279539693608507 1.1203265775059503 0.0 0.1396419542890517 0.0 0.0 0.018590992626550222 0.0 3.649495796306663e-05 4.437767132257882 -0.007627391854900356 TGTTVPES(ph)IHSFIGDGLVKPEALNK ddPTM_A549_MK2206_60min_R1 2 TGTTVPESIHSFIGDGLVKPEALNK 25 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 TGTTVPES(1)IHSFIGDGLVKPEALNK;T(0.015)GT(0.015)T(0.015)VPES(0.954)IHSFIGDGLVKPEALNK 154.49 1.3684e-40 6063000.0 1556.8600000000001 1907.69 1871.85 1852.8200000000002 3485.7 2138.5 1979.33 2376.9 2983.9 2770.5 2884.1000000000004 True False 1819.6199064274422 2004.7832725972 2137.306476797505 2306.7609831762506 2972.9581474788697 2364.794650578587 2338.9486401374875 2713.8328539509603 2308.051414309162 2144.6421258041855 2167.8983728893786 0.8393474201478595 0.9247588806135878 0.985888685339479 1.0640540220996595 1.371354942029181 1.0908235737207481 1.0789014233264693 1.2518266021547677 1.0646492673145869 0.9892724458969001 1.0 11.08208141203421 -5.837887683222663 2.026648707692028 1.0799930981749755 0.8590185203460792 0.3904905999511288 0.10944068242072245 0.3303855790365908 2.5540035185363124 0.016740893679601385 0.0881003752547079 1.4524872097164892e-06 5.837887683222663 -0.2209745778288963 TGTTVPES(ph)IHSFIGDGLVKPEALNK ddPTM_A549_PD325901_60min_R1 2 TGTTVPESIHSFIGDGLVKPEALNK 25 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 TGTTVPES(0.999)IHSFIGDGLVKPEALNK;TGTTVPES(0.999)IHSFIGDGLVKPEALNK 180.85 1.5231e-50 14081800.0 3160.3 3122.2 3695.3 3506.7000000000003 4701.8 4037.1000000000004 4062.1 4717.4 4417.8 4499.9 4871.2 True False 3481.131329510104 3385.3187513618523 3946.085279644067 3723.3008947064686 4371.561788329434 4004.2231960962386 4216.68543836641 4623.307756271293 4232.135229313336 4215.7755460422595 4272.073281080975 0.8148575879834307 0.7924299347471061 0.9236932561806566 0.8715442478936951 1.0232881087712253 0.9373020855772958 0.9870349034133259 1.0822163975383503 0.990651365475282 0.9868219172905971 1.0 12.060720679193489 -6.1552520460810465 0.8393783895407423 1.0013118728678967 0.7781081242291938 0.7438725908411961 0.04307475840505935 0.3223326659575074 0.32626407232104504 0.006409280634418249 0.04996031237881974 6.994359552526146e-07 6.1552520460810465 -0.22320374863870285 TGTTVPES(ph)IHSFIGDGLVKPEALNKK ddPTM_A549_PD325901_60min_R1 1 TGTTVPESIHSFIGDGLVKPEALNKK 26 2 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.117)GT(0.117)T(0.105)VPES(0.661)IHSFIGDGLVKPEALNKK 97.639 1.0917e-09 7911800.0 1310.0 1284.9 1234.7 1304.9 1640.4 1555.0 1308.1 1386.4 987.31 1327.4 1447.8 True False 1442.9902356289697 1393.1830323569425 1318.4941668542551 1385.5007093570791 1525.1839630727807 1542.3365955586069 1357.8804613197863 1358.7471643902395 945.8167941630109 1243.587737464499 1269.7297783603708 1.1364545907494852 1.0972279740938182 1.0384053279091043 1.0911776135125426 1.2011878346606026 1.214696718817022 1.0694247582924663 1.070107346891414 0.7448961269415642 0.9794113351191703 1.0 10.31030578252582 -8.610642556850719 6.640607681162489 0.8798162229412123 1.1190050902715798 0.5733630031349268 0.07928726667493245 0.1224183064585093 7.731868701349364 0.017420161914745328 0.019758455961173906 2.4510797565823225e-09 8.610642556850719 0.23918886733036748 TGVAVNKPAEFTVDAK ddPTM_A549_MK2206_60min_R1 2 TGVAVNKPAEFTVDAK 16 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 156.5 3.1878e-20 7958700.0 6324.9 6978.799999999999 6498.0 6743.0 8994.5 6639.7 6528.8 6500.1 10420.2 8342.3 9257.900000000001 False True 7392.388491041534 7333.991111135115 7419.514109693711 8395.035302704768 7671.420964942101 7342.308646923844 7714.998449843957 7421.509080721376 8060.041337640115 6457.7686360210255 6958.907924958424 1.0622914645167834 1.0538997196429973 1.0661894351387096 1.2063725218429189 1.1023886287427684 1.0550949554297646 1.1086507442028055 1.0664761138890506 1.1582336516815273 0.9279859290650994 1.0 12.764645203542715 -11.027973347055903 1.318796012076584 0.9999930637366855 1.1038749195298332 0.46885624806212167 0.05126728524454237 0.3739824805021221 1.1587397462873597 0.03449677223476946 0.007762978820923962 9.37619547501697e-12 11.027973347055903 0.10388185579314768 TGVAVNKPAEFTVDAK ddPTM_A549_PD325901_60min_R1 2 TGVAVNKPAEFTVDAK 16 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 213.99 2.5676999999999996e-46 16835400.0 10287.8 10191.7 11144.1 9982.8 12270.7 12126.3 12152.599999999999 11522.099999999999 12540.599999999999 11819.0 12439.1 False True 11332.209882521925 11050.590326774269 11900.405640917234 10599.414883416239 11408.848363616906 12027.547433261956 12615.07384315789 11292.282676587416 12013.562193111233 11072.746322956838 10909.16955795172 1.038778416846757 1.0129634770154863 1.0908626525327951 0.9716060262066694 1.0458035602995068 1.1025172328076107 1.1563734321062717 1.0351184493558856 1.1012352617028047 1.0149944286901185 1.0 13.413253662675283 -6.998107986571099 24.981479929942818 1.060881495641612 1.0289917194426348 0.11717955552908155 0.049017992155356946 144.76997194701553 1911446.892452865 0.008003612513972075 0.015046721925961758 1.0043660253543725e-07 6.998107986571099 -0.03188977619897715 TGVLLPSSPEAEVPGKLS(ph)PK ddPTM_A549_MK2206_60min_R1 1 TGVLLPSSPEAEVPGKLSPK 20 1 O60285 O60285 NUAK1 NUAK family SNF1-like kinase 1 1 TGVLLPSSPEAEVPGKLS(0.999)PK 86.236 6.2892e-06 2102500.0 1696.7 1909.8 1859.9 1742.3 2614.8 1749.5 1754.5 1816.6 2999.6 3092.1 2851.7 True False 1983.061479667691 2007.0006625846613 2123.661787106701 2169.1635782148187 2230.166383804614 1934.630928775889 2073.269939384148 2074.1086131041748 2320.1953893769105 2393.592462443283 2143.5441870838886 0.925132074074703 0.9363001120658104 0.9907245205874501 1.0119518838404649 1.040410735287229 0.9025383943252374 0.9672158623446234 0.9676071179693407 1.0824108051317296 1.1166517941949048 1.0 11.065782441882163 -8.736940222088851 24.644871387674996 1.0389162118051767 0.9691594300486763 0.43823986837375484 0.04698622933092883 170.78323090814254 171798.84935167586 0.007964219222956604 0.009028373028695108 1.8325666463156532e-09 8.736940222088851 -0.06975678175650035 TGVLLPSSPEAEVPGKLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TGVLLPSSPEAEVPGKLSPK 20 1 O60285 O60285 NUAK1 NUAK family SNF1-like kinase 1 1 TGVLLPSSPEAEVPGKLS(1)PK;TGVLLPSSPEAEVPGKLS(1)PK 150.53 6.5802e-22 11829200.0 6683.5 6999.1 6896.4 8228.0 8421.6 8593.7 7217.1 8711.7 9086.2 8758.9 8622.400000000001 True False 7362.003999867348 7588.938720343583 7364.431175422121 8736.224872856192 7830.095868942775 8523.715756432151 7491.750689848659 8537.938309303561 8704.338612111647 8205.86155919677 7561.899461896993 0.973565443042865 1.003575723081593 0.9738864173651239 1.1552950309477674 1.0354668041273458 1.1271924202882586 0.990723392660561 1.1290732377922568 1.1510783310425103 1.0851587753241871 1.0 12.88453295297866 -6.2291939733000286 24.856508981095935 1.077055691529993 0.9856658213712155 0.39890998452195503 0.05444959818433176 626.9113885468927 483256.6422919494 0.00902715808614518 0.02388064783619425 5.899375316042817e-07 6.2291939733000286 -0.09138987015877742 TGVPSTAS(ph)VGK ddPTM_A549_PD325901_60min_R1 1 TGVPSTASVGK 11 0 E9PHV5;P28290-3;P28290;P28290-2;E7EUL7;H7BZ26 E9PHV5 SSFA2 Sperm-specific antigen 2 1 TGVPS(0.002)T(0.017)AS(0.982)VGK 89.46 0.00030183 34650000.0 17305.0 17923.0 17400.0 18638.0 18931.0 17373.0 17919.0 17775.0 17172.0 19858.0 19606.0 True False 19061.790860732308 19433.43411077397 18580.868634699957 19789.226930030844 17601.35186840455 17231.52004799978 18600.91735065303 17420.46368078225 16450.320557238563 18604.16249101253 17194.586292674012 1.1085925846819498 1.1302065533879027 1.080623186765278 1.1508986952749374 1.0236566073069082 1.0021479874361097 1.0817891767816599 1.013136541017243 0.9567151123750762 1.0819779071357527 1.0 14.069666784120884 -7.260459480229385 0.6755364971821741 0.9810067132589565 1.1249417187837685 0.36297064040757254 0.046901370519114284 0.3215037927867195 0.2813172354826481 0.007481856479632567 0.021322907311963808 5.4895977128510694e-08 7.260459480229385 0.14393500552481198 TGVRFS(ph)AATK ddPTM_A549_PD325901_60min_R1 2 TGVRFSAATK 10 1 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 T(0.051)GVRFS(0.946)AAT(0.003)K;T(0.006)GVRFS(0.993)AAT(0.002)K 51.726000000000006 0.0068593000000000005 3457300.0 2930.0 2935.9 3333.4 3017.5 3730.3 3319.7 3022.8 3334.3999999999996 3884.0 3082.8 3426.4 True False 3227.4514430480026 3183.318596541947 3559.624569362579 3203.884121760278 3468.2965968363765 3292.6654638430286 3137.8343081396274 3267.8927762138032 3720.7689869738288 2888.151481886062 3004.974521739174 1.074036208859457 1.0593496129543067 1.184577287963957 1.0661934397719892 1.154185026110986 1.0957382300657075 1.0442132821557364 1.087494337330508 1.2382031727910883 0.9611234507953501 1.0 11.553137043479955 TGVTST(ph)S(ph)DSEEEGDDQEGEKKR ddPTM_A549_PD325901_60min_R1 1 TGVTSTSDSEEEGDDQEGEKKR 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 T(0.002)GVT(0.014)S(0.094)T(0.659)S(0.654)DS(0.577)EEEGDDQEGEKKR 64.203 0.00055888 66557000.0 2009.6 2126.7 2289.2 1901.6 2585.5 2443.6 2042.1 2625.5 2496.2 2721.2 2573.5 True False 2213.6131126106707 2305.924472654298 2444.5588780778817 2019.057513153054 2403.9033994907804 2423.700131772997 2119.813232979997 2573.132342835095 2391.2933947693286 2549.382967597103 2256.975814760611 0.9807872544019531 1.0216877192806246 1.083112571295837 0.894585356186995 1.0650993173118046 1.0738706706212844 0.9392272700116806 1.140079714637092 1.0595121928778686 1.1295570607908825 1.0 11.140175243682808 TGVTST(ph)SDS(ph)EEEGDDQEGEKKR ddPTM_A549_MK2206_60min_R1 2 TGVTSTSDSEEEGDDQEGEKKR 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 TGVT(0.009)S(0.081)T(0.771)S(0.14)DS(0.999)EEEGDDQEGEKKR;TGVT(0.013)S(0.095)T(0.764)S(0.139)DS(0.989)EEEGDDQEGEKKR 131.43 4.3738e-22 12613100.0 2021.12 2531.3 2395.1000000000004 1575.96 3199.5 1628.18 1892.0700000000002 1551.3400000000001 3356.7 3216.5 3716.8 True False 2362.2356443602066 2660.132357943532 2734.7611948487875 1962.070270747532 2728.8577883520225 1800.4729269015872 2235.834627649223 1771.247195779496 2596.4128095484302 2489.8904160437323 2793.8159815385216 0.845522990765967 0.9521501686301574 0.9788623205393745 0.7022904456531325 0.9767492942929163 0.644449362019215 0.8002798475001833 0.6339884972682027 0.929342815241044 0.8912148947879448 1.0 11.448021283482191 -8.977942295783988 20.147787750013805 0.9688290715954546 0.8194058584219456 0.172714026021776 0.11853394676285953 17.752652586262833 16216.61022557079 0.020391164988922347 0.020984985431668896 1.052101656092298e-09 8.977942295783988 -0.14942321317350904 TGVTSTS(ph)DS(ph)EEEGDDQEGEKK ddPTM_A549_MK2206_60min_R1 2 TGVTSTSDSEEEGDDQEGEKK 21 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 T(0.007)GVT(0.061)S(0.061)T(0.196)S(0.824)DS(0.851)EEEGDDQEGEKK;TGVT(0.011)S(0.011)T(0.096)S(0.895)DS(0.987)EEEGDDQEGEKK 141.86 4.0746e-22 22120000.0 3514.4 3574.5 3558.2 3427.0 4241.3 3471.0 3399.2 3057.8 5070.6 4703.5 4720.2 True False 4107.544801169409 3756.4267820760665 4062.80626425241 4266.615153843875 3617.410388416135 3838.2989161366713 4016.790640042514 3491.2525141197557 3922.1171960843308 3640.976083277379 3548.044069107331 1.1576927234172842 1.0587317149702606 1.1450833713219888 1.2025259750838815 1.0195505799696158 1.0818070016538344 1.132114078011753 0.983993559865263 1.1054308006583229 1.0261924633290784 1.0 11.792808213660635 -14.999999999492589 0.126630196430417 0.6725903584162978 1.146735248156088 0.31940247963762336 0.0562672026701184 67.74856996602533 0.5906189064933182 5.707922924487065 0.17895341175685717 1.000000001168357e-15 14.999999999492589 0.4741448897397902 TGVTSTS(ph)DS(ph)EEEGDDQEGEKK ddPTM_A549_PD325901_60min_R1 2 TGVTSTSDSEEEGDDQEGEKK 21 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 T(0.005)GVT(0.048)S(0.009)T(0.081)S(0.869)DS(0.989)EEEGDDQEGEKK;T(0.003)GVT(0.143)S(0.143)T(0.129)S(0.68)DS(0.903)EEEGDDQEGEKK 132.1 3.7860000000000005e-18 82427000.0 8628.9 9590.2 10064.599999999999 9904.8 11937.4 12466.400000000001 10447.8 11358.0 11764.8 11066.3 10862.3 True False 9504.899575739557 10398.399810809831 10747.644279356393 10516.597000567093 11098.958205794332 12364.877771621756 10845.396746255536 11131.455779821372 11270.366369194058 10367.57192941343 9526.305961792961 0.997752918482856 1.0915458575983772 1.1282069169793452 1.1039533102071128 1.1650852124956712 1.2979719338443905 1.1384682362453018 1.1684965635647402 1.183078353182858 1.0883097783122362 1.0 13.21770116996625 -4.261153472121345 14.487359157511571 1.1127005462910857 1.1261180322538136 0.0 0.08150494003533006 0.0 0.0 0.012702521594915236 0.0 5.480832476013457e-05 4.261153472121345 0.013417485962727849 TGVTSTS(ph)DS(ph)EEEGDDQEGEKKR ddPTM_A549_MK2206_60min_R1 1 TGVTSTSDSEEEGDDQEGEKKR 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 T(0.001)GVT(0.007)S(0.072)T(0.072)S(0.849)DS(1)EEEGDDQEGEKKR 93.99700000000001 9.381700000000001e-07 7950400.0 823.18 960.52 1029.4 1036.3 1641.4 663.86 653.95 665.54 1933.7 1800.5 1874.9 True False 962.1126591812632 1009.4063652873697 1175.3843989717927 1290.1935465212748 1399.9522343494316 734.1092245653964 772.7642501340914 759.8823331307681 1495.7200374843742 1393.7657994984413 1409.310585392426 0.6826831992561531 0.7162412428813895 0.8340137448442595 0.9154785040956868 0.993359624812306 0.5208995321361202 0.5483278548701976 0.5391872742651521 1.061313278270657 0.9889699360417021 1.0 10.46077387404393 -8.780985918596587 24.98424888069283 1.0289535361406268 0.7259631074532329 0.45285834781063117 0.14555049359267 161.52317103163182 206456.93550937064 0.027455187232576814 0.02924830746806796 1.655823650411865e-09 8.780985918596587 -0.3029904286873939 TGVTSTS(ph)DS(ph)EEEGDDQEGEKKR ddPTM_A549_PD325901_60min_R1 3 TGVTSTSDSEEEGDDQEGEKKR 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 TGVT(0.007)S(0.053)T(0.602)S(0.641)DS(0.697)EEEGDDQEGEKKR;TGVT(0.001)S(0.007)T(0.072)S(0.92)DS(1)EEEGDDQEGEKKR;TGVT(0.001)S(0.008)T(0.084)S(0.908)DS(0.999)EEEGDDQEGEKKR 156.89 1.1244e-32 145641000.0 9730.900000000001 9841.599999999999 9767.9 10523.5 12029.1 13318.3 11678.800000000001 12976.7 12767.1 12839.0 12626.5 True False 10718.773804490042 10670.986171098208 10430.80843315435 11173.51269439744 11184.217514142161 13209.840180468289 12123.243124884573 12717.869538475787 12230.543185786191 12028.343348882545 11073.52054597819 0.967964412039043 0.9636489250903879 0.9419595502482481 1.009029842677771 1.009996546961226 1.1929214494721818 1.0947957403923934 1.1484937862055813 1.1044855278864518 1.086225767039475 1.0 13.43482634302002 -6.773566727350225 2.5029924991562114 1.0717629745458552 0.9623577470109467 0.5508706790502294 0.05267975503034366 0.23840827793525063 3.050220936109901 0.009550143212629435 0.020847720894497938 1.684353613703882e-07 6.773566727350225 -0.10940522753490856 TGVTSTS(ph)DSEEEGDDQEGEKK ddPTM_A549_MK2206_60min_R1 1 TGVTSTSDSEEEGDDQEGEKK 21 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 TGVT(0.002)S(0.002)T(0.07)S(0.463)DS(0.463)EEEGDDQEGEKK 126.45 3.6347e-16 11491000.0 1549.8 1999.4 2361.9 1558.1 2241.8 1806.6 1737.5 1842.8 2653.7 2099.8 2528.6 True False 1811.36835102787 2101.1609198721185 2696.8529356241297 1939.834569945766 1912.0341896945026 1997.7732128759758 2053.181259435711 2104.0225433383102 2052.6411870881134 1625.453721625565 1900.6788341902447 0.9530112707334776 1.1054792014702925 1.4188893394885849 1.0206009216555532 1.0059743683677604 1.0510840532020218 1.080235767612174 1.1069847811688276 1.0799516205285729 0.8551964131899563 1.0 10.892299058907644 -13.395557223701957 0.156351417139706 0.7847309529268137 1.130439093866781 0.17097532052337816 0.12135249487130358 66.19144947005513 1.067653071033399 4.813127668546698 0.22269391429593635 4.022006575659041e-14 13.395557223701957 0.34570814093996727 TGVTSTS(ph)DSEEEGDDQEGEKK ddPTM_A549_PD325901_60min_R1 2 TGVTSTSDSEEEGDDQEGEKK 21 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 TGVT(0.003)S(0.002)T(0.017)S(0.961)DS(0.017)EEEGDDQEGEKK;TGVT(0.001)S(0.002)T(0.016)S(0.956)DS(0.025)EEEGDDQEGEKK 183.42 1.0115000000000001e-44 28317000.0 7458.299999999999 8266.6 8038.7 8479.0 9030.8 8943.2 9361.8 9206.4 9228.900000000001 10425.0 9948.5 True False 8215.461125489732 8963.255393635221 8584.25452263004 9002.728572793832 8396.507762568688 8870.369544308513 9718.068421973521 9022.771129718922 8841.041427364264 9766.763720858367 8724.897568737499 0.9416111834856208 1.0273192691398225 0.9838802639229369 1.0318434688622409 0.9623617579941023 1.016673201539037 1.1138318066672426 1.0341406370257853 1.0133117733144426 1.1194129952716028 1.0 13.090922478684446 -5.254645397551853 23.905486703673226 1.013945223104995 0.9416111220589877 0.1480632229120138 0.048406344774035256 471.4870087131253 1658903.3945362733 0.004989972287459292 0.0656144550857915 5.563583397356475e-06 5.254645397551853 -0.07233410104600735 TGVTSTSDS(ph)EEEGDDQEGEKK ddPTM_A549_MK2206_60min_R1 1 TGVTSTSDSEEEGDDQEGEKK 21 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 TGVT(0.003)S(0.003)T(0.003)S(0.106)DS(0.885)EEEGDDQEGEKK 96.303 4.494e-07 14310000.0 1952.9 1825.7 1538.6 1391.3 1960.3 1568.0 1696.7 1283.7 2604.9 2075.2 2254.8 True False 2282.5017761790727 1918.6203318048067 1756.79661575481 1732.1685624578292 1671.9424667937064 1733.924719245837 2004.968427559466 1465.6684061663723 2014.8943091705278 1606.4108787110072 1694.8709306858195 1.3467112656510498 1.1320155989863183 1.0365371096688363 1.02200617822675 0.9864718525304843 1.0230423378281759 1.1829623077836182 0.8647669740688149 1.1888187310848577 0.9478072044465253 1.0 10.726959696814594 -5.295450577766945 2.782660345478263 1.063910540201891 1.3877915091750115 0.46379299245259886 0.09411586986364444 0.2865193220235462 3.1496606262533686 0.013154469014361328 0.20261598324206032 5.064649814008671e-06 5.295450577766945 0.3238809689731206 TGVTSTSDS(ph)EEEGDDQEGEKKR ddPTM_A549_MK2206_60min_R1 1 TGVTSTSDSEEEGDDQEGEKKR 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 TGVTSTS(0.001)DS(0.999)EEEGDDQEGEKKR 199.94 3.6927999999999996e-61 11315000.0 897.09 1348.8 1257.0 1214.2 2092.6 1329.0 988.98 702.84 1733.7 2078.8 2364.6 True False 1048.496860255254 1417.4481588093993 1435.261501367344 1511.6790545075098 1784.7813120504582 1469.6338978811975 1168.6648644355275 802.4697223572273 1341.0197181500023 1609.1976362106989 1777.4045603599832 0.5899033251286914 0.7974820085542703 0.8075041177325752 0.8504980172895161 1.0041502941170473 0.8268426506026001 0.6575120208979515 0.45148400102827496 0.7544819834818031 0.905363737721469 1.0 10.795556379532373 -10.472433304609833 1.0302256997187156 0.9869087551814805 0.7573636364346019 0.2277462817796695 0.14068286369275199 0.5145315435402295 1.048634930458841 0.07441168070091263 0.02696951867360122 3.369509579372035e-11 10.472433304609833 -0.22954511874687855 TGVTSTSDS(ph)EEEGDDQEGEKKR ddPTM_A549_PD325901_60min_R1 1 TGVTSTSDSEEEGDDQEGEKKR 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 TGVTSTSDS(1)EEEGDDQEGEKKR 172.8 6.7378e-41 12851000.0 2653.0 2578.0 3326.5 3548.6 3298.7 3527.1 4014.5 3568.0 3207.9 3447.3 3908.0 True False 2922.3306069646255 2795.2571074917882 3552.2562938695064 3767.7889625446624 3067.0106918972106 3498.3764670062774 4167.273994318693 3496.8334409581485 3073.083118772746 3229.636889680103 3427.3407748531063 0.8526524786814859 0.8155760664364025 1.0364467752763085 1.0993330427454058 0.8948659889323847 1.0207261830146481 1.2158913478620463 1.0202759721516226 0.8966377493946327 0.9423156615695805 1.0 11.74287392844466 -5.754471910555646 24.992122929999976 0.9875531668709319 0.8341142088839382 0.3441101528862759 0.08991921298998018 162.0371361970021 581207.031396835 0.013560971455594534 0.050319847843577986 1.7600624980334747e-06 5.754471910555646 -0.1534389579869937 TGYES(ph)GEYEMLGEGLGVK ddPTM_A549_MK2206_60min_R1 1 TGYESGEYEMLGEGLGVK 18 0 F8VW18;F8W1I6;Q13561;Q13561-3;Q13561-2;H0YHL1;F8VX93;F8VRV7 F8VW18 DCTN2 Dynactin subunit 2 1 T(0.08)GYES(0.92)GEYEMLGEGLGVK 96.993 1.9309e-06 1727900.0 605.13 614.17 670.44 607.24 1142.9 949.32 978.74 820.62 1093.1 1121.2 1144.5 True False 707.2611499919309 645.42862966783 765.5184733307257 756.0138272600399 974.780923990475 1049.776412292384 1156.5643889842343 936.94539804335 845.5145953220097 867.9201412927813 860.289063406919 0.8221203547456868 0.7502462336459351 0.8898386669000735 0.8787904663882067 1.1330853377702432 1.2202600927356402 1.3443904359355736 1.089105322730544 0.9828261584235426 1.0088703648697355 1.0 9.748677687116432 -6.613687954300619 4.833939658083985 1.0517958870265323 0.8237357727712523 0.5472937733589702 0.1134408464443026 0.17465524064003513 7.038056794284057 0.019686233545122073 0.041931639058587045 2.4339522042695156e-07 6.613687954300619 -0.22806011425527994 TGYES(ph)GEYEMLGEGLGVK ddPTM_A549_PD325901_60min_R1 4 TGYESGEYEMLGEGLGVK 18 0 F8VW18;F8W1I6;Q13561;Q13561-3;Q13561-2;H0YHL1;F8VX93;F8VRV7 F8VW18 DCTN2 Dynactin subunit 2 1 TGYES(1)GEYEMLGEGLGVK;T(0.121)GYES(0.879)GEYEMLGEGLGVK;T(0.019)GY(0.005)ES(0.833)GEY(0.143)EMLGEGLGVK;T(0.174)GY(0.011)ES(0.738)GEY(0.077)EMLGEGLGVK 136.48 6.617e-13 7213600.0 6633.2 5976.1 6670.2 7261.7 7910.9 6960.299999999999 7745.499999999999 7367.7 7653.299999999999 6662.6 7933.799999999999 True False 7306.597580896248 6479.726920124773 7122.879883171016 7710.23871648272 7355.265675123422 6903.617624480111 8040.259241000234 7220.745443651166 7331.658416067664 6241.92229895357 6957.992896501939 1.050101328009341 0.93126380214938 1.0236974928146265 1.1081124731183565 1.057095887352976 0.9921852073104063 1.1555428929860498 1.0377626926410521 1.0537030613747222 0.8970866156088826 1.0 12.764455490756042 -4.904533953292057 21.271951094126162 1.033930279305003 2.78779918617611 0.0 0.06973986752189808 7688.22308984283 1579634.616736741 0.007502369196805561 50984.09362750087 1.2458508324163893e-05 4.904533953292057 1.7538689068711069 TGYS(ph)DPEPESPPAPGR ddPTM_A549_MK2206_60min_R1 1 TGYSDPEPESPPAPGR 16 0 H3BSB7;B4DFZ0;Q96S06 H3BSB7 LMF1 Lipase maturation factor 1 1 T(0.124)GY(0.003)S(0.869)DPEPES(0.005)PPAPGR 46.964 0.027132 945040.0 346.17 478.4 549.31 415.2 900.43 541.96 431.41 655.44 1168.0 711.45 647.85 True False 404.5950329560705 502.7485165883876 627.2104179125658 516.9240186390361 767.9779397924079 599.3098474760675 509.7916127385093 748.3506272008158 903.4498649127321 550.7329508765157 486.9709652496045 0.8308401564530424 1.0323993676516137 1.2879831913409447 1.0615089102367299 1.5770507783739611 1.2306890764398695 1.046862439688181 1.5367458854908056 1.855243801752441 1.130935908251181 1.0 8.927691946601561 -4.987098688731648 0.6236034745681941 1.3940036398786082 0.2700407273187032 0.23737966636686403 0.25412834132164497 5.13692569149044 1.0741382756174305 0.05701937906435104 4.4510987812009155 1.0301520029228518e-05 4.987098688731648 -1.123962912559905 TGYTLDVTTGQR ddPTM_A549_PD325901_60min_R1 2 TGYTLDVTTGQR 12 0 O43390-4;O43390;O43390-2;F6UXX1;O60506-2;O60506;B7Z645;O60506-4;O60506-3 O43390-4;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 ; 78.653 0.00030994 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 THAVS(ph)VSETDDY(ph)AEIIDEEDTYTMPSTR ddPTM_A549_PD325901_60min_R1 2 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 H0YBP1;E7ESA6;Q05397;Q05397-7;Q05397-5;Q05397-4;Q05397-3;H0YB99;H0YB33;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 2 T(0.007)HAVS(0.953)VS(0.04)ET(0.023)DDY(0.978)AEIIDEEDTYTMPSTR;T(0.009)HAVS(0.948)VS(0.049)ET(0.125)DDY(0.869)AEIIDEEDTYTMPSTR 114.0 1.0272e-20 7749300.0 794.54 644.8199999999999 1226.68 951.3999999999999 1207.94 988.73 1065.79 1102.68 1180.3400000000001 1489.69 1037.45 True False 875.2011158905667 699.1612443959866 1309.9298814260776 1010.1658172138284 1123.0984615667733 980.6781106923869 1106.3492216726659 1080.686182364274 1130.7344145429172 1395.6307191679139 909.850226937399 0.9619177860036778 0.7684355333398092 1.439720343682681 1.1102550588068727 1.2343772945434968 1.0778456515787198 1.215968506593324 1.1877627222250822 1.2427698329526446 1.5339125911587406 1.0 9.829485268450659 -5.732754351463939 24.99999632131093 1.1498976654084359 0.8651765189421327 0.3481244831460991 0.16541303410445798 151.9654911147927 132441.01882223395 0.017506330997917794 0.06777840009949922 1.8503149104826768e-06 5.732754351463939 -0.2847211464663032 THAVS(ph)VSETDDYAEIIDEEDTYTMPSTR ddPTM_A549_MK2206_60min_R1 2 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 H0YBP1;E7ESA6;Q05397;Q05397-7;Q05397-5;Q05397-4;Q05397-3;H0YB99;H0YB33;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 T(0.014)HAVS(0.921)VS(0.051)ET(0.013)DDY(0.001)AEIIDEEDTYTMPSTR;T(0.006)HAVS(0.961)VS(0.032)ET(0.001)DDYAEIIDEEDTYTMPSTR 121.45 3.3198000000000002e-21 16747700.0 2449.5 2867.76 2052.39 1835.05 3194.25 2830.8900000000003 2864.33 2805.0099999999998 3993.7 3923.1000000000004 3977.3999999999996 True False 2862.9157154747504 3013.7167348066773 2343.449763557139 2284.637332378526 2724.3800563973873 3130.4529008073023 3384.7416845119374 3202.6287574828507 3089.133326628406 3036.86898528872 2989.7018093444117 0.9575923948423929 1.008032548726835 0.7838406346186798 0.7641689633520696 0.9112547772765323 1.0470786387535267 1.1321335371751173 1.0712201288680125 1.0332580048529314 1.0157765486166166 1.0 11.545785882920528 -7.179607178432737 4.766016557174674 1.0323134873899897 0.8768260875116203 0.5545691866557556 0.07290976192116679 0.155226171187405 6.321503383453788 0.011675950910154128 0.020467314420722898 6.612913189388236e-08 7.179607178432737 -0.15548739987836946 THAVS(ph)VSETDDYAEIIDEEDTYTMPSTR ddPTM_A549_PD325901_60min_R1 2 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 H0YBP1;E7ESA6;Q05397;Q05397-7;Q05397-5;Q05397-4;Q05397-3;H0YB99;H0YB33;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 T(0.016)HAVS(0.811)VS(0.171)ET(0.002)DDYAEIIDEEDTYTMPSTR;T(0.012)HAVS(0.936)VS(0.051)ETDDYAEIIDEEDTYTMPSTR 144.78 4.3398999999999994e-36 31266000.0 1731.2 2178.7 1833.73 1881.51 2240.4 1959.51 1828.65 2523.7 1648.03 2003.2600000000002 2232.8999999999996 True False 1906.950149557918 2362.306695148314 1958.1779449142748 1997.7265994807549 2083.042032960412 1943.55240023347 1898.2402764256765 2473.362823695651 1578.7690302787028 1876.7738217215094 1958.2674555193196 0.9737945366876392 1.2063248503110346 0.9999542909193571 1.0201500279495637 1.0637168212592305 0.9924856764358844 0.9693467922757648 1.2630362705178755 0.8062070509464825 0.9583848296267587 1.0 10.935362102923655 -8.791259341945139 24.999953347321377 0.9084866875977629 1.0572804202356811 0.2766593345628041 0.09976449356541021 188.3247563241556 157883.63072460637 0.018400013656736186 0.019589580316254625 1.6171140784322146e-09 8.791259341945139 0.14879373263791829 THAVSVSETDDY(ph)AEIIDEEDT(ph)YTMPSTR ddPTM_A549_PD325901_60min_R1 2 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 H0YBP1;E7ESA6;Q05397;Q05397-7;Q05397-5;Q05397-4;Q05397-3;H0YB99;H0YB33;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 2 THAVSVS(0.006)ET(0.123)DDY(0.869)AEIIDEEDT(0.428)Y(0.459)T(0.101)MPS(0.007)T(0.007)R;THAVSVS(0.002)ET(0.037)DDY(0.961)AEIIDEEDT(0.542)Y(0.358)T(0.09)MPS(0.005)T(0.005)R 83.70100000000001 1.6822e-06 3637300.0 1469.0 1307.3 1206.96 978.74 1348.31 1371.81 1166.82 1295.8 1605.84 1572.09 1470.47 True False 1618.1317985793576 1417.4707589697496 1288.8715636400855 1039.194546920183 1253.609357016985 1360.6384341821558 1211.2239736084034 1269.9542524645644 1538.352129259025 1472.827969105442 1289.6115120773409 1.2547436056714687 1.0991455532887184 0.999426223765587 0.805819843563757 0.9720829453496715 1.0550762159298679 0.9392161610416545 0.9847572238393623 1.192880270416481 1.1420710464448096 1.0 10.332720812318303 -8.699321608425578 24.999991921609205 1.0910840357269713 1.0067189057248451 0.12052986067706661 0.11293930917401455 129.15965117715874 51981.02486032656 0.021289855048282107 0.024140422545813812 1.9983814586021084e-09 8.699321608425578 -0.0843651300021262 THAVSVSETDDY(ph)AEIIDEEDTYTMPSTR ddPTM_A549_MK2206_60min_R1 5 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 H0YBP1;E7ESA6;Q05397;Q05397-7;Q05397-5;Q05397-4;Q05397-3;H0YB99;H0YB33;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 T(0.001)HAVS(0.003)VS(0.016)ET(0.016)DDY(0.959)AEIIDEEDT(0.003)Y(0.003)T(0.001)MPSTR;THAVSVSET(0.002)DDY(0.998)AEIIDEEDTYTMPSTR;THAVSVS(0.004)ET(0.145)DDY(0.851)AEIIDEEDTYTMPSTR;THAVSVSETDDY(1)AEIIDEEDTYTMPSTR;THAVSVSET(0.003)DDY(0.997)AEIIDEEDTYTMPSTR 171.52 2.4299999999999998e-57 31530100.0 2267.9 2587.88 2303.41 2048.6 3659.18 2632.8599999999997 2221.74 2878.2299999999996 4068.6100000000006 4165.13 4143.31 True False 2650.666075168478 2719.5920382708114 2630.068174116588 2550.5070919651494 3120.919469286435 2911.4674976489787 2625.401399331624 3286.227916709695 3147.076331235096 3224.224240191585 3114.4117774613555 0.8510968569895117 0.8732281511238142 0.8444831197820702 0.818937017392138 1.00208954123285 0.9348370432962457 0.842984674772731 1.0551680867930675 1.0104881936326244 1.035259455260518 1.0 11.604743990166627 -7.427564366269328 0.6448332238685783 1.0086881700393053 0.8456416300351762 0.5690694421413166 0.05593998509030101 0.4122676138852232 0.33589848435531927 0.011493998842556046 0.029224887706450983 3.7362474679847126e-08 7.427564366269328 -0.1630465400041291 THAVSVSETDDY(ph)AEIIDEEDTYTMPSTR ddPTM_A549_PD325901_60min_R1 5 THAVSVSETDDYAEIIDEEDTYTMPSTR 28 0 H0YBP1;E7ESA6;Q05397;Q05397-7;Q05397-5;Q05397-4;Q05397-3;H0YB99;H0YB33;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 THAVSVS(0.015)ET(0.106)DDY(0.87)AEIIDEEDT(0.003)Y(0.003)T(0.002)MPSTR;THAVSVSET(0.001)DDY(0.999)AEIIDEEDTYTMPSTR;THAVSVSETDDY(1)AEIIDEEDTYTMPSTR;THAVSVSETDDY(1)AEIIDEEDTYTMPSTR;THAVSVS(0.006)ET(0.17)DDY(0.824)AEIIDEEDTYTMPSTR 223.85 2.611499999999999e-104 84122300.0 5629.400000000001 6294.85 5982.25 6143.25 6807.86 5828.7 6041.09 6547.85 5955.24 6578.379999999999 6604.3 True False 6200.892543854754 6825.339101277997 6388.241459191604 6522.704600166964 6329.699399442005 5781.232999699328 6270.98698576129 6417.247995061048 5704.961972704956 6163.019964126647 5792.012968107061 1.0705936913468828 1.1784053555924006 1.1029397714348352 1.1261550407575671 1.092832394246291 0.9981388217762819 1.082695605187978 1.1079477947298735 0.9849705109637289 1.0640549318626333 1.0 12.499849117228717 -7.808050044653166 0.5116748431163309 0.9896341226970253 1.1310822367974898 0.27746010169646285 0.04815694587897385 0.46186352505602773 0.252346519677372 0.012187003868637138 0.02475192824624535 1.5557863447908106e-08 7.808050044653166 0.14144811410046443 THDHQLES(ph)SLSPVEVFAK ddPTM_A549_PD325901_60min_R1 1 THDHQLESSLSPVEVFAK 18 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 THDHQLES(0.565)S(0.401)LS(0.034)PVEVFAK 122.01 7.3431e-11 3032100.0 1381.9 1592.5 1356.1 1384.2 1465.0 1593.3 1750.5 1184.4 1556.8 1530.4 2336.6 True False 1522.189470698988 1726.7055638792372 1448.133100891761 1469.6988902537128 1362.1034539756304 1580.3246930569323 1817.1162354103556 1160.7762128561749 1491.3731099178315 1433.770282820302 2049.213012927782 0.7428166135467698 0.8426188751418442 0.7066776815079672 0.7172016188565495 0.6646958834355369 0.771186149554588 0.8867385791261291 0.5664497568252963 0.7277784693486085 0.699668738083907 1.0 11.000854243009115 -10.585099188674704 0.8477290629651615 1.002401588464538 0.7371096584864658 0.0 0.11850114941797027 0.340990173578057 0.4330251309080691 0.05633876042634242 0.015079386451186349 2.599565779586593e-11 10.585099188674704 -0.26529192997807227 THDHQLESS(ph)LSPVEVFAK ddPTM_A549_PD325901_60min_R1 2 THDHQLESSLSPVEVFAK 18 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 THDHQLES(0.094)S(0.453)LS(0.453)PVEVFAK;THDHQLES(0.237)S(0.381)LS(0.381)PVEVFAK 91.725 6.088099999999999e-06 6078100.0 474.76 589.47 666.81 752.55 901.4 952.5999999999999 821.8900000000001 889.3499999999999 986.27 880.95 1175.24 True False 522.9572857001602 639.1467056451448 712.0637364542692 799.0333043349452 838.088773661183 944.842341433523 853.1674737054647 871.6112165684218 944.8205017463132 825.3266666561328 1030.6929304601751 0.507384178396057 0.6201136019820995 0.6908592417882918 0.7752389491778114 0.8131313884989977 0.916705949473892 0.8277610610218793 0.8456555689959687 0.9166847601491529 0.8007493233582653 1.0 10.009398865973957 -4.694900596849945 0.2747579261783765 0.9857239009959474 2.52889411186086e-14 0.7773433200588078 0.06364277653263516 1.9112641865034188 0.08277364653726574 0.017260283253897578 0.6704699402005782 2.0188283887483613e-05 4.694900596849945 -0.9857239009959221 down THDHQLESSLS(ph)PVEVFAK ddPTM_A549_PD325901_60min_R1 1 THDHQLESSLSPVEVFAK 18 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 THDHQLES(0.012)S(0.012)LS(0.976)PVEVFAK 125.09 2.9505e-11 1891900.0 1416.3 1673.2 1322.3 1904.9 1818.3 2490.9 2162.4 1773.7 1861.1 2414.9 2683.0 True False 1560.0817333750472 1814.2064360959105 1412.0392296358482 2022.5613466582117 1690.5888807944634 2470.6149362552615 2244.691315310683 1738.3221620592687 1782.8844391495863 2262.422801870588 2353.0080089383036 0.6630159045140559 0.7710158355621132 0.600099627486169 0.8595641574423744 0.7184798667800841 1.049981524444544 0.95396671272849 0.7387659351162233 0.7577043649562579 0.9615023804748594 1.0 11.200290515736796 -6.657063833111377 1.716448519137876 0.8839925674895527 0.6922069884059242 0.392265568230588 0.1104351862874583 0.3496444039155311 2.0691717594629284 0.01868376069358714 0.04873303735426954 2.2026026981372143e-07 6.657063833111377 -0.19178557908362848 THEAQIQEMR ddPTM_A549_MK2206_60min_R1 1 THEAQIQEMR 10 0 P35579 P35579 MYH9 Myosin-9 0 47.971000000000004 0.03684 3370500.0 398.16 577.79 289.3 329.56 567.69 271.33 253.56 289.58 540.02 671.74 591.46 False True 465.3596739226072 607.1970430593735 330.32709017149756 410.30221479451046 484.1835530143955 300.04196050572267 299.6285698661979 330.62885180155644 417.7063322347373 519.9934674563083 444.5841585344312 1.0467302196656363 1.3657640098131132 0.74300238510616 0.9228898666724182 1.089070637627988 0.6748822573768913 0.6739524207383402 0.7436811354040871 0.9395438956073099 1.1696176246370618 1.0 8.796312732806774 -5.760644480818079 24.999998353276037 0.9093117100930014 1.2062471032465791 0.3350361705000219 0.1720808717318918 17.135278880479625 538809.0792362454 0.022341468367781562 0.07750902035720961 1.7352238936318496e-06 5.760644480818079 0.29693539315357775 THEAQIQEMR ddPTM_A549_PD325901_60min_R1 1 THEAQIQEMR 10 0 P35579 P35579 MYH9 Myosin-9 0 54.343 0.022234 3287300.0 868.32 1106.5 940.8 1128.6 1254.5 1302.9 1254.9 900.89 1151.8 1373.9 1570.4 False True 956.4712071766015 1199.748638262087 1004.6483454899843 1198.3110587634292 1166.3882477900534 1292.2896143751177 1302.6559062076285 882.9210422154672 1103.3938514923943 1287.1517195287588 1377.2507555858042 0.6944786222097755 0.8711185188290437 0.7294592806831781 0.8700747150824657 0.8468960667180306 0.9383110585591592 0.9458378591729671 0.6410750102220294 0.8011568314755241 0.9345805143387107 1.0 10.427575539055084 -10.655270508330727 0.9483826019683274 0.9990498226332508 0.8199314839598882 0.2727493467338661 0.09331554345879275 0.5030730721276012 0.8133167189059818 0.05995205746746029 0.01642258443976211 2.2117166719471108e-11 10.655270508330727 -0.17911833867336258 THELRQGDDS(ph)S(ph)DEEDKER ddPTM_A549_MK2206_60min_R1 2 THELRQGDDSSDEEDKER 18 2 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 2 T(0.038)HELRQGDDS(0.981)S(0.981)DEEDKER;T(0.018)HELRQGDDS(0.991)S(0.991)DEEDKER 40.856 0.030267000000000002 14259900.0 936.53 1125.1 888.46 529.77 1363.04 970.36 930.93 859.2 1616.9299999999998 1900.3 1756.6599999999999 True False 1094.5933680398311 1182.362784309354 1014.4569876728959 659.5636737822787 1162.5386216081695 1073.042851127163 1100.067930846899 980.9942311896449 1250.6979367066288 1471.0209101843323 1320.4328406504142 0.8289655742738572 0.8954357600852687 0.7682760958695924 0.4995056571429965 0.8804223780404692 0.8126447768434836 0.8331116108147018 0.7429338327471696 0.9471878449270955 1.114044474582851 1.0 10.366795210230283 -8.846226955591899 4.894154974308083 0.9770456562069851 0.7825353214671267 0.4770323730987276 0.10851804537625545 0.14570681601555538 6.031738986798724 0.01799044444762341 0.01909872960807479 1.4248627877103167e-09 8.846226955591899 -0.19451033473985846 THELRQGDDS(ph)S(ph)DEEDKER ddPTM_A549_PD325901_60min_R1 2 THELRQGDDSSDEEDKER 18 2 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 2 T(0.008)HELRQGDDS(0.996)S(0.996)DEEDKER;T(0.015)HELRQGDDS(0.993)S(0.993)DEEDKER 55.864 0.0029935 42064000.0 1375.9499999999998 1454.32 1604.37 1504.49 2144.77 2143.84 1910.03 1749.48 2047.08 2249.4 2388.55 True False 1515.635431079146 1576.8806503364835 1713.252196060551 1597.4189303553014 1994.128754254821 2126.3812778278857 1982.7172368585195 1714.5852489594913 1961.048346512458 2107.3725001149937 2094.773492265964 0.7235318933884584 0.7527690493308353 0.8178699044961121 0.7625735843293192 0.9519543576512068 1.0150888798615314 0.9465067436545463 0.8185062753991534 0.9361624795008971 1.0060144965054916 1.0 11.032578538490572 -3.399632200578819 0.25653858994772966 0.9851272925768951 2.4080194482437148e-11 0.6604462181542613 0.0616554178979511 10.52574918600049 0.24075219020313082 0.0304054682053325 3.9474982977013204 0.00039844446612782495 3.399632200578819 -0.985127292552815 THELRQGDDS(ph)SDEEDKER ddPTM_A549_MK2206_60min_R1 1 THELRQGDDSSDEEDKER 18 2 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 1 THELRQGDDS(0.5)S(0.5)DEEDKER 87.772 1.5217e-06 6514300.0 842.12 1299.3 941.82 470.5 1524.2 797.94 572.89 681.24 1513.0 1950.5 1506.7 True False 984.2492681427218 1365.4288202409948 1075.3842380412025 585.7725211215475 1299.9921990955302 882.377481170296 676.9766973917264 777.8078562100021 1170.3079157645238 1509.8806953189187 1132.5448071954602 0.86905989227926 1.2056289619324019 0.9495290881287025 0.5172179655938787 1.1478505670029275 0.779110438336954 0.5977482684046163 0.6867788817434083 1.0333435889945732 1.333175240154835 1.0 10.145352413820946 -8.806648416782926 24.998317053159283 1.0157456898884138 0.8485283598770855 0.20165369522911303 0.22006104744981325 197.8797878330777 109416.67412279782 0.034766255077568094 0.03701156766491023 1.5608155501650223e-09 8.806648416782926 -0.16721733001132832 THELRQGDDS(ph)SDEEDKER ddPTM_A549_PD325901_60min_R1 1 THELRQGDDSSDEEDKER 18 2 Q12846;H3BMK2;A0A087WWW0 Q12846 STX4 Syntaxin-4 1 THELRQGDDS(0.806)S(0.194)DEEDKER 87.319 1.5771000000000001e-06 10437000.0 1486.8 1652.7 1794.5 1674.0 1809.2 2504.4 1910.5 1944.8 1965.7 2598.2 2110.4 True False 1637.7388414756888 1791.9788291511552 1916.2855612051208 1777.3991780701583 1682.1280334011676 2484.004996731173 1983.2051229657134 1906.0094383339144 1883.0884649058853 2434.1492085884133 1850.8341789278397 0.8848652462342176 0.9682006359906437 1.035363180031177 0.9603232954665765 0.9088485897616171 1.3421002405359292 1.0715196129101927 1.0298110225293315 1.017426891260853 1.315163311928073 1.0 10.853959930840457 -4.675634803150182 0.8995426805506482 1.0303350251227053 0.5984972179134304 0.09768545214989233 0.13500100732398448 8.054831673443946 2.329068766453686 0.015836433459118386 4.399531974231916 2.1104020343665524e-05 4.675634803150182 -0.4318378072092749 THFGGGK ddPTM_A549_MK2206_60min_R1 2 THFGGGK 7 0 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4;A0A2R8Y8A0 E7ETK0 RPS24 40S ribosomal protein S24 0 ; 74.415 0.019988 11250800.0 3357.0 3330.3 2674.0 1595.9899999999998 3994.8999999999996 3559.1 3443.9 2847.5 4845.5 4044.7 4356.299999999999 False True 3923.5795292299367 3499.7980451385993 3053.2134086366577 1987.0076216467144 3407.2555020120317 3935.721599660628 4069.6120514363447 3251.1418451030186 3748.0019866734947 3130.9994608338493 3274.5104822363983 1.198218649937026 1.06880037920915 0.9324182729601156 0.6068105851014544 1.0405388898572017 1.2019267066058195 1.2428153989774113 0.992863471575324 1.1445991720001198 0.9561732899677465 1.0 11.677063534018945 -6.98720844079433 24.99205009242045 1.0878749489090462 0.9417070301456183 0.14473538198733749 0.15623971640474343 339.87217574958134 664035.5595878741 0.022796445612013425 0.04306291072364759 1.0298917025343986e-07 6.98720844079433 -0.14616791876342794 THFGGGK ddPTM_A549_PD325901_60min_R1 2 THFGGGK 7 0 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4;A0A2R8Y8A0 E7ETK0 RPS24 40S ribosomal protein S24 0 ; 55.441 0.043024 17683400.0 3164.2 2683.5 2567.7 2203.9 3252.2 2530.56 2221.79 2086.24 2435.4 3423.4 2994.1 False True 3485.427254639075 2909.6479627440685 2741.9595628344323 2340.0298975799437 3023.776691480919 2509.951958364495 2306.3414342601386 2044.6283065763796 2333.0486073316333 3207.245939758902 2625.844681163688 1.3273546907178257 1.1080807572573592 1.0442200113752675 0.8911532027640413 1.1515443823360034 0.9558645933514113 0.8783236307937466 0.7786554632280335 0.8884945191418187 1.221414946118426 1.0 11.358565867937108 -2.0000019137179157 0.5910113840101209 0.9338957085369205 24.521326154454147 0.4084560594021297 0.12212781285506757 72.48396025494472 0.5284945370258264 0.015764515974438457 2209.584182558692 0.009999955935113637 2.0000019137179157 23.587430445917228 THFPQFS(ph)YSASIRE ddPTM_A549_MK2206_60min_R1 2 THFPQFSYSASIRE 14 1 P31751-2;P31751 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 THFPQFS(0.99)YS(0.004)AS(0.006)IRE;T(0.001)HFPQFS(0.964)Y(0.002)S(0.021)AS(0.012)IRE 70.942 0.00088568 6491200.0 570.4000000000001 789.9 725.23 1013.6000000000001 1487.9099999999999 1167.75 1420.08 1417.5 2647.6 1751.24 1374.8600000000001 True False 666.6695750589088 830.1025360643127 828.0785192017809 1261.9320455022334 1269.0404100224584 1291.3205299102856 1678.0901541867431 1618.434965911687 2047.9228273484155 1355.633667710998 1033.4443177943524 0.6450948189272168 0.803238763590064 0.8012802479471005 1.2210934094596748 1.2279717331369449 1.2495308239405778 1.6237838123375994 1.5660591848488379 1.981647963113516 1.31176266042498 1.0 10.013244942795472 -6.448231650578537 0.9601768172294821 1.48623351279865 0.6546183528861702 0.6210595563150423 0.23478697874854226 0.48402813427376057 0.7752401444169655 0.057158500813245416 0.2693935484400471 3.562610548117319e-07 6.448231650578537 -0.8316151599124797 THFPQFS(ph)YSASIRE ddPTM_A549_PD325901_60min_R1 2 THFPQFSYSASIRE 14 1 P31751-2;P31751 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 THFPQFS(0.987)YS(0.005)AS(0.007)IRE;THFPQFS(0.875)YS(0.051)AS(0.074)IRE 62.765 0.0024787 27904000.0 1804.6599999999999 1401.7800000000002 1378.46 1640.03 2340.5 2081.93 1878.1399999999999 2491.1 2119.2 1778.62 1291.81 True False 1987.8677546795243 1519.9129201473374 1472.0105849533634 1741.330928321626 2176.1113542866633 2064.9754523416927 1949.6136454576426 2441.413056269856 2030.1373937165145 1666.317629658812 1132.9255594582892 1.7546322775434846 1.3415823373903641 1.2993003579663331 1.5370214872319123 1.920789354710274 1.8226929696325902 1.7208665028175856 2.1549633476688643 1.791942442085276 1.470809459410171 1.0 10.14583735453317 -10.674288758351542 0.9951771504034677 1.0096920026384568 1.6996554328439157 0.2593259929998478 0.2683554438299755 0.35016565079129264 0.6300688845993239 0.1645920663161141 0.04612638591672268 2.1169531248202015e-11 10.674288758351542 0.6899634302054589 THHNDTELIRK ddPTM_A549_MK2206_60min_R1 1 THHNDTELIRK 11 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 46.73 0.0060718000000000005 2177100.0 223.21 180.07 183.31 132.76 114.13 266.06 136.99 196.39 397.83 465.38 425.84 False True 260.8823910394444 189.23479385884386 209.30611441181208 165.2862059598229 97.34162818709682 294.21429260366574 161.8793097727183 224.22888391915072 307.722140203966 360.25033477955276 320.0921754138947 0.8150227062005212 0.5911884400615357 0.6538932547825298 0.5163706540033345 0.304104991198955 0.9191549035000071 0.5057271692549201 0.7005134806222986 0.9613547716562153 1.1254581100388712 1.0 8.322343600711507 -8.702207378370657 3.360675233885664 0.9840443577631229 0.6107360335067366 0.5642194254895607 0.15782088057057228 0.1246432169406826 2.8283005581578604 0.025247435322501566 0.028073442164748434 1.9851467708237993e-09 8.702207378370657 -0.3733083242563864 THILLFLPK ddPTM_A549_PD325901_60min_R1 1 THILLFLPK 9 0 H7BZ94;P07237;I3L398;I3L312;I3L4M2 H7BZ94 P4HB Protein disulfide-isomerase 0 76.827 0.0071524 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 THKHS(ph)PEK ddPTM_A549_PD325901_60min_R1 1 THKHSPEK 8 1 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 T(0.029)HKHS(0.971)PEK 41.283 0.038164 2743900.0 436.67 468.94 318.81 299.68 382.79 374.12 283.45 462.33 364.01 501.44 531.46 True False 481.0004169405366 508.45921954507344 340.44636376027 318.19055297733894 355.9041509538102 371.0732907590908 294.2368448597916 453.10846545913125 348.7119255788735 469.778992823714 466.09378920251623 1.0319820346963333 1.090894646794252 0.7304245875980707 0.6826749472928209 0.7635891299104417 0.7961343818676389 0.6312824836461115 0.9721401056092106 0.74815827555977 1.0079065709661206 1.0 8.864476478565702 -5.749677779406153 24.988541004506146 0.8340234479390485 1.0614384590648276 0.36549764621640535 0.12325419549993842 206.505222138534 438729.7596823738 0.018453096784137545 0.07030842545674783 1.7795992768326535e-06 5.749677779406153 0.2274150111257791 THKHS(ph)PEKR ddPTM_A549_MK2206_60min_R1 1 THKHSPEKR 9 2 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 T(0.013)HKHS(0.987)PEKR 43.083999999999996 0.018268 37464000.0 329.12 306.53 170.1 0.0 455.79 354.32 359.16 485.82 554.9 314.23 423.8 True False 384.66740978854835 322.13106770451157 194.22273777453074 0.0 388.7438947813618 391.813907221419 424.41472295765755 554.6864727613516 429.2160359932149 243.245224757787 318.5587637150305 1.2075241795345988 1.0112139560934406 0.6096920251369206 0.0 1.2203208295004435 1.2299580229785156 1.332296490632169 1.7412375233146975 1.3473684760315487 0.7635803891284062 1.0 8.315415717045553 -6.936940180826185 24.999996947076784 1.2337444754302036 0.7079056530303616 0.33379408845139147 0.35780494258810497 58.280916293632394 23104.825107356075 0.05114982963290395 0.09666409239871598 1.156271494600572e-07 6.936940180826185 -0.525838822399842 THKHS(ph)PEKR ddPTM_A549_PD325901_60min_R1 2 THKHSPEKR 9 2 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 T(0.005)HKHS(0.995)PEKR;THKHS(1)PEKR 53.568999999999996 0.0055241000000000005 47214000.0 644.27 662.53 430.14 377.95 585.87 410.98 1063.13 890.28 529.74 768.24 908.6700000000001 True False 709.6758161134933 718.3637282492374 459.33188704194515 401.29511311327144 544.7205123417767 407.6331151399846 1103.5879939170586 872.5226669888513 507.47687002047275 719.7331952913411 796.9093505337192 0.8905351852606542 0.9014371932869442 0.5763916394434496 0.5035643173775154 0.6835413739052724 0.511517545712041 1.384835042000631 1.0948832089929563 0.6368062687187658 0.9031556660858723 1.0 9.638271814902202 THNDIIHNENMR ddPTM_A549_MK2206_60min_R1 2 THNDIIHNENMR 12 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 101.89 0.00021590000000000002 14999300.0 1057.71 1201.46 975.76 714.73 1545.04 1100.15 1053.44 671.1800000000001 1179.17 1738.0 1959.93 False True 1236.22558947328 1262.6091821494233 1114.137440393158 889.8388820854493 1317.7666627021115 1216.5671427795335 1244.8364120517729 766.3218204025442 912.0898777475566 1345.3845929065774 1473.2252896838124 0.8391286778267308 0.8570374069674082 0.7562573410834381 0.6040073356848421 0.8944773565385469 0.825784862164996 0.8449735561618977 0.5201660776316257 0.6191109290170492 0.9132239327736 1.0 10.52476235282032 -10.978191821471553 1.2908038877605734 0.9979472508987519 0.739232235322853 0.3000995058278245 0.11807966711141718 0.38364713640944204 1.1516391210212118 0.08512262096580171 0.02027600053030944 1.051497340364855e-11 10.978191821471553 -0.25871501557589893 THNHDPQPGDPNS(ph)RPSSPKPAQPALK ddPTM_A549_MK2206_60min_R1 1 THNHDPQPGDPNSRPSSPKPAQPALK 26 2 Q8TE67-3;Q8TE67 Q8TE67-3 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 THNHDPQPGDPNS(0.333)RPS(0.333)S(0.333)PKPAQPALK 73.126 4.3849e-06 5002700.0 578.06 568.7 393.64 282.17 327.34 553.4 501.83 326.38 585.7 602.97 906.42 True False 675.6223957898895 597.6444008859033 449.4640711203194 351.30166266709284 279.1887196246759 611.9604206828101 593.006015207265 372.6453644968299 453.03988517070786 466.7586582191481 681.3308980806459 0.9916215420336322 0.8771720210686277 0.6596854368215053 0.5156109368542258 0.4097696441056306 0.8981838669092258 0.8703641899667286 0.5469374213713138 0.6649337149495952 0.685068972409791 1.0 9.412211823660808 -10.722133377921397 0.9312126638956939 1.0037092698615595 0.7072525713929243 0.0 0.19529958391172345 0.6541429594296505 0.9889359086771935 0.13165833365938345 0.03252086774162716 1.896123505681736e-11 10.722133377921397 -0.2964566984686352 THNHDPQPGDPNS(ph)RPSSPKPAQPALK ddPTM_A549_PD325901_60min_R1 1 THNHDPQPGDPNSRPSSPKPAQPALK 26 2 Q8TE67-3;Q8TE67 Q8TE67-3 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 THNHDPQPGDPNS(0.333)RPS(0.333)S(0.333)PKPAQPALK 40.799 0.022234 3853000.0 475.48 570.61 459.03 726.84 671.79 685.92 662.91 657.76 851.1 716.26 630.76 True False 523.7503795701243 618.6973072559695 490.18253617162804 771.7352560265919 624.6057879496848 680.3340949360507 688.1374028082712 644.6404607972623 815.3312267799764 671.0352213623037 553.180518717079 0.9467983087777416 1.1184365434466765 0.8861167730715569 1.3950875526426327 1.1291174703661895 1.229859100088815 1.2439653594529692 1.1653347126039337 1.4738972165376865 1.2130492644942559 1.0 9.111606539963152 -6.252904222149715 24.964745871744228 1.2283664135333607 0.9972491469452712 0.41948083327435315 0.12937548111247646 672.6448536754136 1967433.480126515 0.02437849023475643 0.06338034144871418 5.585933714648661e-07 6.252904222149715 -0.2311172665880895 THNS(ph)EVEEDDMDKHQQK ddPTM_A549_MK2206_60min_R1 2 THNSEVEEDDMDKHQQK 17 1 P78504-2;P78504 P78504-2 JAG1 Protein jagged-1 1 T(0.002)HNS(0.998)EVEEDDMDKHQQK;T(0.002)HNS(0.998)EVEEDDMDKHQQK 143.15 1.3167e-16 9568700.0 2772.3 2597.9 2228.5 974.0 3707.5 2214.4 2211.3 2141.0 3555.8 3951.2 3801.2 True False 3240.196463772462 2730.1220134719297 2544.534809703361 1212.630043724521 3162.1316612955507 2448.726338200244 2613.0645864691733 2444.4933065375108 2750.416977445799 3058.6211757724195 2857.257132217022 1.1340234056072884 0.9555044880939908 0.8905515646500421 0.4244035407424494 1.106701817502147 0.8570199407640333 0.9145360272288924 0.8555384389366326 0.9626074413931648 1.0704745965229785 1.0 11.480415158766913 -8.900055679411054 4.327761526839084 0.9841472819234675 0.8855665766806894 0.07771089425819488 0.17545871782649897 0.4949193219018934 16.008972787251015 0.03005090966625685 0.03159137968095533 1.2587640196162714e-09 8.900055679411054 -0.09858070524277807 THPYS(ph)PK ddPTM_A549_MK2206_60min_R1 1 THPYSPK 7 0 M0QZ39;M0R1C6;M0QXT0;B4DLJ1;Q15853-4;Q15853-3;Q15853-2;Q15853;H0YD59;E9PME6;B1AQP1;P22415-2;P22415 M0QZ39 USF2;USF1 Upstream stimulatory factor 2;Upstream stimulatory factor 1 1 THPYS(1)PK 107.57 0.0092056 13995000.0 4678.5 4437.2 4387.2 3186.7 6275.2 3908.8 4435.2 4819.6 6889.4 6580.5 6331.1 True False 5468.116421656915 4663.034527186438 5009.370929831987 3967.441643056399 5352.126392707173 4322.426621548556 5241.018429841301 5502.793059405974 5328.961900111111 5093.960479644263 4758.913140529091 1.1490263134008316 0.9798528339325829 1.052629199547662 0.833686500656598 1.1246530950787914 0.9082802089277034 1.1013057551326961 1.1563129851103313 1.1197854936092915 1.0704041719656017 1.0 12.216416407395096 THPYS(ph)PK ddPTM_A549_PD325901_60min_R1 3 THPYSPK 7 0 M0QZ39;M0R1C6;M0QXT0;B4DLJ1;Q15853-4;Q15853-3;Q15853-2;Q15853;H0YD59;E9PME6;B1AQP1;P22415-2;P22415 M0QZ39 USF2;USF1 Upstream stimulatory factor 2;Upstream stimulatory factor 1 1 T(0.08)HPYS(0.92)PK;T(0.005)HPY(0.002)S(0.994)PK;T(0.012)HPY(0.001)S(0.988)PK 98.23299999999999 0.0044578000000000005 169554000.0 16376.699999999999 15351.4 16293.399999999998 15899.5 18205.3 17268.399999999998 15982.5 16426.5 16996.199999999997 18415.7 17643.800000000003 True False 18039.250528110657 16645.116353742986 17399.168104173594 16881.57600461559 16926.622532875455 17127.77187571977 16590.722783459572 16098.860571160038 16281.9088198776 17252.929559156968 15473.72445326338 1.1657988729601692 1.0757020007702516 1.1244331096062747 1.0909833670364535 1.0938945296589964 1.1068939431778206 1.072186779179761 1.0403998481286656 1.0522294660897737 1.1149823438608768 1.0 13.917532868097425 -2.000252841657433 0.04661612832445498 0.7990778171589206 1.5889657292967576 0.11654388013157102 0.04019330161667027 121.9303830950162 0.4186291457872859 1.736037891939652 7.057251342249247 0.009994179800080908 2.000252841657433 0.789887912137837 THQPERPRS(ph)PAAR ddPTM_A549_PD325901_60min_R1 1 THQPERPRSPAAR 13 2 Q9P2Y4;G3V2Q8 Q9P2Y4 ZNF219 Zinc finger protein 219 1 T(0.004)HQPERPRS(0.996)PAAR 41.912 0.01846 21815000.0 406.78 518.42 519.45 465.78 808.01 292.29 505.03 549.31 491.08 435.55 668.57 True False 448.0760061443914 562.1090727951479 554.7030007066033 494.550172736869 751.2581650831733 289.9096871484407 524.2491930130197 538.3535811246411 470.4416153767015 408.0492986685722 586.3401284144171 0.7641912678841887 0.9586740622976038 0.9460430453679386 0.8434527141681966 1.281266842702252 0.4944394441028886 0.8941042367860718 0.9181591964044122 0.8023356966013417 0.6959259291565468 1.0 9.195593986204432 -4.462314549446244 16.768595107504872 0.8982231546206049 0.889418558820692 0.0 0.19011017461013885 0.0 0.0 0.021790100649114807 0.0 3.4489385021541255e-05 4.462314549446244 -0.008804595799912884 THRPRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 THRPRSPR 8 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 THRPRS(1)PR;THRPRS(1)PR 60.91 0.0036381 239080000.0 5646.8 4987.0 4387.6 1252.9 6061.2 4750.2 5084.9 5021.299999999999 6639.5 7182.8 7825.700000000001 True False 6599.8417889948205 5240.816998800767 5009.827655846744 1559.8605562448192 5169.605509223089 5252.863011072433 6008.760509988287 5733.084652086313 5135.663851102812 5560.2004913287465 5882.3627116675625 1.1219712405534177 0.8909374099638057 0.8516692868853257 0.2651758541089048 0.8788314768433555 0.892985228648596 1.021487590023991 0.9746227720223443 0.8730614045469032 0.9452325135102919 1.0 12.52218002947712 -6.9903886688637575 24.9952658181337 0.9430064115171938 0.767242294116551 0.13823064492886417 0.19496812593656848 315.6733742701526 820934.9437330057 0.028202294906979238 0.05325137452780916 1.0223776129128293e-07 6.9903886688637575 -0.1757641174006428 THRPRS(ph)PR ddPTM_A549_PD325901_60min_R1 2 THRPRSPR 8 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 THRPRS(1)PR;THRPRS(1)PR 73.327 0.0017194000000000003 417100000.0 6485.4 6294.3 6609.2 6669.2 7423.0 6422.4 7332.0 5355.1 8253.9 6969.1 8252.8 True False 7143.793033700855 6824.74275084777 7057.740056348215 7081.141337147853 6901.6340879597965 6370.098103739935 7611.023272224352 5248.288329505318 7907.017286710429 6529.0698366459565 7237.757918809554 0.9870174042620985 0.9429360345296385 0.9751279519872436 0.9783611743555716 0.953559674885473 0.8801203598127071 1.051571958830614 0.7251262598692361 1.092467774607603 0.9020845833594611 1.0 12.821327139378127 THS(ph)DAS(ph)DDEAFTTSK ddPTM_A549_MK2206_60min_R1 2 THSDASDDEAFTTSK 15 0 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 2 T(0.057)HS(0.943)DAS(0.945)DDEAFT(0.049)T(0.006)S(0.001)K;T(0.11)HS(0.933)DAS(0.882)DDEAFT(0.063)T(0.01)S(0.002)K 97.836 1.5691e-05 8625200.0 3739.2 3627.6000000000004 3378.8 2114.39 4475.6 3584.2 3445.4 3830.0 4851.9 4396.3 5858.1 True False 4370.285545337084 3812.229345267632 3857.964646634828 2632.4156449185734 3817.245168791469 3963.477665000595 4071.384582020031 4372.9142288830735 3752.9523968921953 3403.1727766370445 4403.372094664981 0.9924860882485984 0.865752260611007 0.8761386872821956 0.5978181240027262 0.8668913475234925 0.9001005547095711 0.9246060733665505 0.9930830588178524 0.8522905437492284 0.7728560529236778 1.0 12.10439304500459 -7.309270909319995 3.1618598211635245 0.932784929424603 0.8288742002586089 0.06840003061134226 0.10667570659458053 0.34556097620031584 6.943112354834327 0.015482807783201522 0.026295087085190866 4.906017473539072e-08 7.309270909319995 -0.10391072916599409 THS(ph)EGSLLQEPR ddPTM_A549_MK2206_60min_R1 2 THSEGSLLQEPR 12 0 P49796-1;P49796-4;P49796-6;P49796;C9J582 P49796-1 RGS3 Regulator of G-protein signaling 3 1 T(0.034)HS(0.966)EGSLLQEPR;T(0.098)HS(0.902)EGSLLQEPR 126.71 3.1256e-07 9386300.0 1224.48 1168.5 1076.54 858.7099999999999 1383.92 1012.0799999999999 823.53 1308.1200000000001 2029.59 1873.78 1885.15 True False 1431.142288338241 1227.9716589329653 1229.209559810661 1069.093988548957 1180.3472012677382 1119.1776338356683 973.1547410550169 1493.5500159494852 1569.8911055892384 1450.491796603271 1417.0152275068183 1.0099695899925358 0.8665903055209452 0.8674639029627127 0.7544689483894856 0.8329813105428034 0.7898134135120175 0.6867637850069147 1.0540112674564033 1.1078858399788682 1.0236247066697748 1.0 10.468639546468147 -8.288134105027085 23.835571010819628 1.0525995012579121 0.82828737741429 0.6313990312544591 0.07957588499725121 201.16867191793395 179621.78724522024 0.013803605857295231 0.016690862116916262 5.150695725983671e-09 8.288134105027085 -0.2243121238436221 THS(ph)EGSLLQEPR ddPTM_A549_PD325901_60min_R1 1 THSEGSLLQEPR 12 0 P49796-1;P49796-4;P49796-6;P49796;C9J582 P49796-1 RGS3 Regulator of G-protein signaling 3 1 T(0.035)HS(0.965)EGSLLQEPR 123.1 2.8061e-06 7101400.0 1342.6 1639.0 1309.3 1242.3 1613.4 1443.0 1248.9 1725.2 1570.3 1690.3 1541.5 True False 1478.8997636301192 1777.124282071 1398.1569714604987 1319.034049531994 1500.0803499278381 1431.248686425125 1296.427572924303 1690.7895326067812 1504.3057518653472 1583.5741695315974 1351.9052723736088 1.09393741843579 1.3145331395526052 1.034212233676464 0.9756852617462605 1.109604630281581 1.0586900692473882 0.9589633234051222 1.2506716018927688 1.1127301465613497 1.1713647412227601 1.0 10.40077835058345 -10.660910755571187 1.010212683522037 1.0019175405014422 1.1004107265329783 0.0 0.11197982658439201 0.914290834086563 1.7102000973225058 0.06127938822943903 0.017707824032661888 2.1831784934123517e-11 10.660910755571187 0.09849318603153612 THS(ph)LHQR ddPTM_A549_MK2206_60min_R1 2 THSLHQR 7 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 T(0.002)HS(0.998)LHQR;T(0.004)HS(0.996)LHQR 67.89699999999999 0.0071244 39296000.0 941.54 1389.03 1093.69 557.43 1146.21 825.28 731.6 1008.01 1118.81 1315.21 1733.4 True False 1100.448933557091 1459.7256939731776 1248.791687693278 694.0003750239836 977.6040273752053 912.6105818234722 864.5222500162107 1150.8985044011565 865.4013213724432 1018.1031475469841 1302.9489405937554 0.8445833134916363 1.1203245564695565 0.9584348617100852 0.5326381974014475 0.7503011030729339 0.7004192976338692 0.6635119942783382 0.8833028436837216 0.664186672562993 0.7813837640353223 1.0 10.347564833959154 -6.025581753537791 24.78838600894026 0.7936980769146771 0.9966854520897986 0.32121780604414785 0.13538528769343872 717.8880862372428 695625.134101782 0.022745718012231037 0.06045891415399722 9.427971184035153e-07 6.025581753537791 0.20298737517512155 THS(ph)LHQR ddPTM_A549_PD325901_60min_R1 2 THSLHQR 7 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 T(0.004)HS(0.996)LHQR;T(0.006)HS(0.994)LHQR 68.37100000000001 0.0070149 41491000.0 1987.12 1696.39 1830.42 1606.23 2160.6 1788.9 1586.42 2125.7 1449.3 2160.1400000000003 2109.52 True False 2188.850959559572 1839.3507387812228 1954.6433084096273 1705.4431790869958 2008.8469096653562 1774.3317915079058 1646.7920812223338 2083.3012459206107 1388.3909610765122 2023.7483917482025 1850.0624133490605 1.1831227658948122 0.9942101009725143 1.0565283064538618 0.9218300781538127 1.0858265619422305 0.9590659097256811 0.8901278515470414 1.1260707913898598 0.7504562824792428 1.0938811453851054 1.0 10.853358226706547 -5.061003817052912 0.3826540028623296 0.898155035066153 1.3377897863744996 0.010433328027750655 0.11640664614802583 6.474836972243675 0.5678102038923266 0.030828264829232822 1.3444300448383433 8.689527919491975e-06 5.061003817052912 0.4396347513083466 THSAGT(ph)SPTITHQK ddPTM_A549_PD325901_60min_R1 1 THSAGTSPTITHQK 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 T(0.001)HS(0.001)AGT(0.473)S(0.473)PT(0.049)IT(0.003)HQK 66.965 0.0035347 11611000.0 1350.4 1006.0 1207.7 1227.5 1642.4 1860.4 1453.2 1274.5 1514.3 1186.8 1227.6 True False 1487.4916138880617 1090.7791505573066 1289.6617844900659 1303.3198871452335 1527.0434899724057 1845.2495192136537 1508.5023212215517 1249.0790976740914 1450.6592371201014 1111.8652454594446 1076.612982397562 1.381640049124704 1.0131580878099735 1.1978880113613855 1.2105741881755938 1.4183773695276811 1.713939502293923 1.4011556110555106 1.16019323386985 1.3474287054290925 1.0327436726458357 1.0 10.072284012055396 -10.711022294531416 0.7952407231400977 0.9836391398582406 1.3161846489939995 0.311730235413886 0.171472955457515 0.773175899947485 0.7985464593983699 0.16264108662793006 0.03482432740210349 1.9452602190177764e-11 10.711022294531416 0.33254550913575887 THSAGTS(ph)PTITHQK ddPTM_A549_PD325901_60min_R1 3 THSAGTSPTITHQK 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 THSAGT(0.12)S(0.88)PTITHQK;THS(0.001)AGT(0.195)S(0.804)PT(0.001)ITHQK;T(0.007)HS(0.006)AGT(0.251)S(0.715)PT(0.019)IT(0.001)HQK 93.51 6.8935e-05 27620300.0 4388.3 4640.6 4193.5 4985.0 5623.5 5364.1 4441.52 4323.4 5206.5 4568.2 5530.3 True False 4833.796985504283 5031.679648187119 4478.096127564041 5292.912128243571 5228.524760021816 5320.416548061688 4610.5444740930025 4237.166395358311 4987.688911091462 4279.763072386113 4850.108159460119 0.9966369463485012 1.037436585485799 0.9232981987895528 1.0912977513542175 1.0780223013838561 1.09696863928369 0.9506065272173676 0.873623073146056 1.0283665326850477 0.8824056972911933 1.0 12.243801205029241 -7.7746720865025 24.99976067305512 0.9967479496406421 1.0364107433213667 0.15385306259541343 0.07016996088373245 486.6351841964384 919368.368734561 0.010155592780405828 0.014073456635112024 1.6800720756286304e-08 7.7746720865025 0.03966279368072467 THSDAS(ph)DDEAFTTSK ddPTM_A549_MK2206_60min_R1 3 THSDASDDEAFTTSK 15 0 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 T(0.001)HS(0.004)DAS(0.996)DDEAFTTSK;T(0.001)HS(0.006)DAS(0.993)DDEAFTTSK;T(0.001)HS(0.005)DAS(0.995)DDEAFTTSK 120.9 1.6774999999999998e-07 19467300.0 5166.26 5607.200000000001 4917.7 3536.1 7518.2 5966.9 5208.26 5835.4 8075.200000000001 8485.900000000001 8551.1 True False 6038.1983850698425 5892.582529712388 5615.103806900708 4402.444658741561 6412.28273929932 6598.313397492343 6154.53342519058 6662.5858201630035 6246.180093444599 6568.929296286496 6427.625871646053 0.9394134795097397 0.9167587920302142 0.8735890854616175 0.6849254680739745 0.9976129394191383 1.026555298838913 0.9575127034602067 1.0365547020328953 0.9717709490526106 1.02198376624 1.0 12.650070242170877 THSDAS(ph)DDEAFTTSK ddPTM_A549_PD325901_60min_R1 1 THSDASDDEAFTTSK 15 0 Q13017-2;Q13017;H0YK04 Q13017-2 ARHGAP5 Rho GTPase-activating protein 5 1 T(0.006)HS(0.026)DAS(0.968)DDEAFTTSK 124.04 8.351499999999999e-08 21326000.0 6890.5 6039.4 6050.7 6209.7 6382.4 6957.8 6622.7 5480.6 6095.9 5140.8 6590.1 True False 7590.018487481998 6548.36143327614 6461.336887814893 6593.259065748071 5934.122242084687 6901.137983651239 6874.730472580498 5371.2851335524765 5839.710522063275 4816.209010665582 5779.559478085844 1.3132520767821163 1.13302085705759 1.117963559733942 1.1407892056042515 1.026743000843731 1.1940595143657653 1.1894903925891196 0.9293589163531568 1.0104075482232693 0.8333176652869542 1.0 12.496743818391339 -2.0000000001204152 0.19343197881022334 0.9788468976222561 2.225646854626353 0.5334929987728043 0.08856931913572606 28.900811737651736 0.3157400111972868 0.06493223155179925 10.945845835819814 0.009999999997227336 2.0000000001204152 1.246799957004097 THSDQFLVAFK ddPTM_A549_MK2206_60min_R1 2 THSDQFLVAFK 11 0 P36542-2;P36542 P36542-2 ATP5C1 ATP synthase subunit gamma, mitochondrial 0 ; 54.776 0.019662 1485990.0 1003.27 1438.35 1166.8899999999999 1195.63 1890.21 1243.79 1109.32 1310.04 1688.17 1882.1100000000001 1735.4099999999999 False True 1172.5974484034919 1511.5558713104251 1332.3725483934281 1488.55940367387 1612.1626129460456 1375.4070322390178 1310.8690847293367 1495.742181829239 1305.8021904535324 1456.940043817835 1304.459802120577 0.8989142068596326 1.1587600237686015 1.0213979351663234 1.1411309120097177 1.235885237954635 1.054388207289413 1.004913361529685 1.146637235886998 1.001029076044178 1.1168914837002877 1.0 10.349236771803392 -8.795468066887642 22.16121070689051 1.0004858102480279 1.0867518683259252 0.0 0.09284354583904324 66.20018462933537 43112.32362301792 0.014128565221867362 0.01504193838105839 1.6015184015948695e-09 8.795468066887642 0.08626605807789733 THSDQFLVAFK ddPTM_A549_PD325901_60min_R1 2 THSDQFLVAFK 11 0 P36542-2;P36542 P36542-2 ATP5C1 ATP synthase subunit gamma, mitochondrial 0 ; 63.408 0.007254399999999999 3146000.0 1783.04 1876.8799999999999 1731.1399999999999 1980.79 1650.78 2144.19 1603.66 1794.66 2081.7 1776.8400000000001 1693.92 False True 1964.0529081953277 2035.0512645109327 1848.6255705904891 2103.138899599517 1534.8349076818363 2126.7284275439297 1664.688158856423 1758.8640984164654 1994.2133883067504 1664.6500191625896 1485.5785786435972 1.3220794486607366 1.3698711692309333 1.244380874338112 1.415703571547041 1.0331563269330475 1.4315825888427471 1.12056553775591 1.183958979822118 1.3423816262398995 1.1205398644631057 1.0 10.53680920220243 -10.893144381456793 0.8750094233385107 0.9795992080343479 1.2762699561630135 0.2951550838704219 0.12230792025415993 0.5199636143634662 0.622303164792617 0.1085179557760823 0.01971540130881549 1.2789560437809227e-11 10.893144381456793 0.2966707481286657 THSEEFTNS(ph)LKTK ddPTM_A549_MK2206_60min_R1 1 THSEEFTNSLKTK 13 1 Q9H788-2;Q9H788;H0YAT1 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 THSEEFT(0.082)NS(0.818)LKT(0.099)K 53.777 0.008962799999999998 1895900.0 589.77 885.36 1073.0 863.52 1427.3 837.65 992.46 805.72 1422.0 1588.3 1375.1 True False 689.3087575078764 930.4210423216864 1225.1675345800795 1075.0824387648856 1217.3460607328768 926.289567012931 1172.777135389678 919.9332774140138 1099.9192704673849 1229.501926877742 1033.62471917069 0.6668849387241153 0.9001536293251509 1.1853117595359661 1.0401090635946268 1.1777447250967374 0.8961565545337602 1.1346256660063572 0.8900070406134496 1.0641379313663135 1.1895051502485454 1.0 10.013496762320624 -5.400499926758205 3.4315238798442675 1.0379712351627484 0.66460144283186 0.5514296924387175 0.1044643154810551 0.1240215230281636 2.366695907917261 0.011572232628977924 0.09461388976900087 3.976491635362879e-06 5.400499926758205 -0.3733697923308884 THT(ph)GEKPYK ddPTM_A549_MK2206_60min_R1 3 THTGEKPYK 9 1 O75362;Q9P0L1;A0A0A0MS50;E9PJ50;A0A0C4DFQ3;F8W7T7;A0A3F2YPB8;A0A087WUV0;B9EG95;A0A087WT67;C9J2N8;F8W6Y9;A0A087WXA8;A0A0M3HEQ9;H9KV89;F8WEL6;E7EX64;B4DI05;P51814-2;Q9HBT7;O14628;Q9H7R0;Q96RE9-3;P17025-2;P51814-6;Q96RE9-2;Q32M78;A0A087X254;P51814-3;Q7Z7L9;P51814-5;P16415;P51814;O14628-6;O14628-5;Q9P2J8;A6NHJ4;P15621-3;Q9P2J8-2;Q8N7K0-2;Q8N8J6-3;Q8N8J6-2;Q8N8J6;Q6ZMW2;P51814-4;Q8N7K0;Q9Y2A4;P15621;Q2M218;Q8N184;Q96RE9;P51814-8;Q8N184-1;I3L4C4;Q6ZT77;Q15973-2;Q99676;Q2M218-2;P36508;P15621-2;Q86XU0;P16415-2;O75346-2;O95780-2;Q9Y4X4;Q96BR6-2;Q13887-4;Q9UJN7;Q15973;Q9H4T2;Q96N95;Q13360-2;Q8IZC7-2;Q13887-2;O75840;Q15973-1;Q15973-4;O75840-4;O75840-2;P52743;Q8N972;P17025;Q8N859;Q8IZC7;Q8N8L2;Q9HBT8;Q8NDW4;Q96RE9-4;O14628-7;Q9H7R0-2;O14628-4;Q14584;Q6ZMS4;C9JN71;P0CG31;P36508-2;Q9UC06;Q9HBT8-2;O75346;O95780;A6NP11;Q13360;O95780-3;Q96BR6;Q96H40;Q13887;P51814-7;O95125-2;O95125;R4GMT1;Q9NPC7-3;Q9NPC7-2;Q9NPC7;P57682;Q7Z3I7;A0A087X2B0;F5H032;Q15937;Q9UC07;P17017;A0A087WVT1;Q96MX3;O14978;Q9UEG4 O75362;O95125-2;R4GMT1;P57682;Q7Z3I7;A0A087WVT1;O14978;Q9UEG4 ZNF217;ZKSCAN7;ZNF300;ZNF48;ZSCAN2;ZNF44;ZNF682;ZNF195;ZNF823;ZNF630;ZNF615;ZNF567;ZNF76;ZNF263;ZNF41;ZNF287;ZNF442;ZNF182;ZNF699;ZNF624;ZNF860;ZNF433;ZNF782;ZNF443;ZNF826P;ZNF124;ZNF184;ZNF677;ZNF253;KLF12;ZNF669;KLF5;ZNF391;ZSCAN16;ZNF396;ZNF177;ZNF101;KLF7;ZNF137P;ZNF709;ZNF713;ZNF491;ZNF286A;ZNF248;ZNF266;ZNF852;ZNF878;ZNF286B;ZNF70;ZNF716;ZNF486;ZNF202;MYNN;KLF3;ZNF572;ZNF79;ZNF69;ZNF14;ZNF629 Zinc finger protein 217;Zinc finger protein with KRAB and SCAN domains 7;Zinc finger protein 41;Zinc finger protein 287;Zinc finger protein 195;Zinc finger protein 442;Zinc finger protein 300;Zinc finger protein 182;Zinc finger protein 699;Zinc finger and SCAN domain-containing protein 2;Zinc finger protein 823;Zinc finger protein 624;Zinc finger protein 860;Zinc finger protein 44;Zinc finger protein 433;Zinc finger protein 615;Zinc finger protein 782;Zinc finger protein 443;Zinc finger protein 630;Zinc finger protein 567;Putative zinc finger protein 826;Zinc finger protein 124;Zinc finger protein 184;Zinc finger protein 76;Zinc finger protein 677;Zinc finger protein 253;Zinc finger protein 682;Krueppel-like factor 12;Zinc finger protein 669;Krueppel-like factor 5;Zinc finger protein 391;Zinc finger and SCAN domain-containing protein 16;Zinc finger protein 396;Zinc finger protein 177;Zinc finger protein 101;Krueppel-like factor 7;Putative zinc finger protein 137;Zinc finger protein 709;Zinc finger protein 713;Zinc finger protein 491;Zinc finger protein 286A;Zinc finger protein 248;Zinc finger protein 266;Zinc finger protein 852;Zinc finger protein 878;Putative zinc finger protein 286B;Zinc finger protein 70;Zinc finger protein 716;Zinc finger protein 486;Zinc finger protein 202;Myoneurin;Krueppel-like factor 3;Zinc finger protein 572;Zinc finger protein 79;Zinc finger protein 69;Zinc finger protein 14;Zinc finger protein 48;Zinc finger protein 263;Zinc finger protein 629 1 T(0.004)HT(0.996)GEKPYK;T(0.009)HT(0.991)GEKPYK;THT(1)GEKPYK 97.911 0.00047776 79830000.0 8263.3 8089.099999999999 7307.799999999999 3222.34 10304.4 8742.0 7056.7 7272.799999999999 10642.4 11526.5 11640.0 True False 9657.943021711577 8500.800638660374 8344.155926565052 4011.8134446563377 8788.636410156145 9667.072637530046 8338.811046595674 8303.741672015887 8231.913392420598 8922.655644498078 8749.466752342978 1.103832187158757 0.9715792835470785 0.9536759396600496 0.45852090855503086 1.0044768051496027 1.1048756354141636 0.953065059006329 0.9490568862144962 0.9408474396701049 1.0197942225574743 1.0 13.094979377356392 THT(ph)GEKPYK ddPTM_A549_PD325901_60min_R1 4 THTGEKPYK 9 1 O75362;Q9P0L1;A0A0A0MS50;E9PJ50;A0A0C4DFQ3;F8W7T7;A0A3F2YPB8;A0A087WUV0;B9EG95;A0A087WT67;C9J2N8;F8W6Y9;A0A087WXA8;A0A0M3HEQ9;H9KV89;F8WEL6;E7EX64;B4DI05;P51814-2;Q9HBT7;O14628;Q9H7R0;Q96RE9-3;P17025-2;P51814-6;Q96RE9-2;Q32M78;A0A087X254;P51814-3;Q7Z7L9;P51814-5;P16415;P51814;O14628-6;O14628-5;Q9P2J8;A6NHJ4;P15621-3;Q9P2J8-2;Q8N7K0-2;Q8N8J6-3;Q8N8J6-2;Q8N8J6;Q6ZMW2;P51814-4;Q8N7K0;Q9Y2A4;P15621;Q2M218;Q8N184;Q96RE9;P51814-8;Q8N184-1;I3L4C4;Q6ZT77;Q15973-2;Q99676;Q2M218-2;P36508;P15621-2;Q86XU0;P16415-2;O75346-2;O95780-2;Q9Y4X4;Q96BR6-2;Q13887-4;Q9UJN7;Q15973;Q9H4T2;Q96N95;Q13360-2;Q8IZC7-2;Q13887-2;O75840;Q15973-1;Q15973-4;O75840-4;O75840-2;P52743;Q8N972;P17025;Q8N859;Q8IZC7;Q8N8L2;Q9HBT8;Q8NDW4;Q96RE9-4;O14628-7;Q9H7R0-2;O14628-4;Q14584;Q6ZMS4;C9JN71;P0CG31;P36508-2;Q9UC06;Q9HBT8-2;O75346;O95780;A6NP11;Q13360;O95780-3;Q96BR6;Q96H40;Q13887;P51814-7;O95125-2;O95125;R4GMT1;Q9NPC7-3;Q9NPC7-2;Q9NPC7;P57682;Q7Z3I7;A0A087X2B0;F5H032;Q15937;Q9UC07;P17017;A0A087WVT1;Q96MX3;O14978;Q9UEG4 O75362;O95125-2;R4GMT1;P57682;Q7Z3I7;A0A087WVT1;O14978;Q9UEG4 ZNF217;ZKSCAN7;ZNF300;ZNF48;ZSCAN2;ZNF44;ZNF682;ZNF195;ZNF823;ZNF630;ZNF615;ZNF567;ZNF76;ZNF263;ZNF41;ZNF287;ZNF442;ZNF182;ZNF699;ZNF624;ZNF860;ZNF433;ZNF782;ZNF443;ZNF826P;ZNF124;ZNF184;ZNF677;ZNF253;KLF12;ZNF669;KLF5;ZNF391;ZSCAN16;ZNF396;ZNF177;ZNF101;KLF7;ZNF137P;ZNF709;ZNF713;ZNF491;ZNF286A;ZNF248;ZNF266;ZNF852;ZNF878;ZNF286B;ZNF70;ZNF716;ZNF486;ZNF202;MYNN;KLF3;ZNF572;ZNF79;ZNF69;ZNF14;ZNF629 Zinc finger protein 217;Zinc finger protein with KRAB and SCAN domains 7;Zinc finger protein 41;Zinc finger protein 287;Zinc finger protein 195;Zinc finger protein 442;Zinc finger protein 300;Zinc finger protein 182;Zinc finger protein 699;Zinc finger and SCAN domain-containing protein 2;Zinc finger protein 823;Zinc finger protein 624;Zinc finger protein 860;Zinc finger protein 44;Zinc finger protein 433;Zinc finger protein 615;Zinc finger protein 782;Zinc finger protein 443;Zinc finger protein 630;Zinc finger protein 567;Putative zinc finger protein 826;Zinc finger protein 124;Zinc finger protein 184;Zinc finger protein 76;Zinc finger protein 677;Zinc finger protein 253;Zinc finger protein 682;Krueppel-like factor 12;Zinc finger protein 669;Krueppel-like factor 5;Zinc finger protein 391;Zinc finger and SCAN domain-containing protein 16;Zinc finger protein 396;Zinc finger protein 177;Zinc finger protein 101;Krueppel-like factor 7;Putative zinc finger protein 137;Zinc finger protein 709;Zinc finger protein 713;Zinc finger protein 491;Zinc finger protein 286A;Zinc finger protein 248;Zinc finger protein 266;Zinc finger protein 852;Zinc finger protein 878;Putative zinc finger protein 286B;Zinc finger protein 70;Zinc finger protein 716;Zinc finger protein 486;Zinc finger protein 202;Myoneurin;Krueppel-like factor 3;Zinc finger protein 572;Zinc finger protein 79;Zinc finger protein 69;Zinc finger protein 14;Zinc finger protein 48;Zinc finger protein 263;Zinc finger protein 629 1 T(0.014)HT(0.986)GEKPYK;T(0.047)HT(0.953)GEKPYK;THT(1)GEKPYK;T(0.368)HT(0.631)GEKPY(0.001)K 113.22 0.00013861 128798000.0 25804.0 21410.5 23511.1 20971.1 24107.9 23649.8 19879.5 14239.3 24251.5 25923.4 25468.2 True False 28423.60308409921 23214.837975156293 25106.70462972956 22266.437218176277 22414.64427173999 23457.203869866196 20636.025250979794 13955.285990985243 23232.293791862998 24286.59209988489 22335.772856221567 1.272559640853524 1.0393568256891486 1.124058020796722 0.9968957582756768 1.0035311702006522 1.050207844647393 0.9239002108329413 0.6247953039645117 1.0401383440551826 1.0873405749700722 1.0 14.447068554788226 -2.000005961388919 0.658398401258285 0.983392556295239 27.107040925607798 0.34068420687415524 0.12171648701409839 199.59590149636395 1.1518126091517735 0.020034937007279326 7630.320408889322 0.00999986273488951 2.000005961388919 26.12364836931256 THT(ph)GEKPYR ddPTM_A549_MK2206_60min_R1 1 THTGEKPYR 9 1 Q8N8E2;Q8N8E2-2;M0QZI7;Q9HCG1;E7EN86;A0A0A0MP75;G5E9B8;A0A1W2PQ54;Q9UJW8-2;Q9UJW8-3;P52747;O94892;Q8WXB4;Q9NX65;Q9BSK1;Q9UJW8-4;P52747-2;P52747-3;Q499Z4;Q9NX65-2;Q9UJW8;Q86TJ5;Q9BSK1-2;Q9NX65-3;Q86UD4;Q7Z3I7;A0A087X2B0;F5H032;Q15937;P17017;Q99612 Q8N8E2;Q7Z3I7;Q99612 ZNF513;ZNF160;ZNF143;ZNF180;ZNF432;ZNF606;ZSCAN32;ZNF577;ZNF672;ZNF554;ZNF329;ZNF572;ZNF79;ZNF14;KLF6 Zinc finger protein 513;Zinc finger protein 160;Zinc finger protein 180;Zinc finger protein 143;Zinc finger protein 432;Zinc finger protein 606;Zinc finger and SCAN domain-containing protein 32;Zinc finger protein 577;Zinc finger protein 672;Zinc finger protein 554;Zinc finger protein 329;Zinc finger protein 572;Zinc finger protein 79;Zinc finger protein 14;Krueppel-like factor 6 1 T(0.031)HT(0.969)GEKPYR 55.401 0.0070285 4526300.0 1130.0 1140.7 924.67 451.74 1340.6 1343.6 927.52 1034.2 1652.2 1384.9 1645.1 True False 1320.7163741524664 1198.756757676366 1055.802110158585 562.4163202793789 1143.399515882081 1485.7788601905022 1096.0383779866536 1180.8010171046683 1277.9793380212463 1072.0501281451775 1236.5762675497788 1.0680427959121417 0.969415950422249 0.8538107497814189 0.45481733317895706 0.9246494097348937 1.2015262618087499 0.8863491939388464 0.9548954222163534 1.0334820193124892 0.8669502692861779 1.0 10.272135507343942 -6.998550996637545 24.99991531520006 1.0139681929022097 0.827559651591658 0.15321713183211727 0.16368642648117107 55.74557641771584 961748.6244950974 0.022528783825175678 0.04235677043979532 1.0033420256985639e-07 6.998550996637545 -0.18640854131055173 THT(ph)GEKPYR ddPTM_A549_PD325901_60min_R1 1 THTGEKPYR 9 1 Q8N8E2;Q8N8E2-2;M0QZI7;Q9HCG1;E7EN86;A0A0A0MP75;G5E9B8;A0A1W2PQ54;Q9UJW8-2;Q9UJW8-3;P52747;O94892;Q8WXB4;Q9NX65;Q9BSK1;Q9UJW8-4;P52747-2;P52747-3;Q499Z4;Q9NX65-2;Q9UJW8;Q86TJ5;Q9BSK1-2;Q9NX65-3;Q86UD4;Q7Z3I7;A0A087X2B0;F5H032;Q15937;P17017;Q99612 Q8N8E2;Q7Z3I7;Q99612 ZNF513;ZNF160;ZNF143;ZNF180;ZNF432;ZNF606;ZSCAN32;ZNF577;ZNF672;ZNF554;ZNF329;ZNF572;ZNF79;ZNF14;KLF6 Zinc finger protein 513;Zinc finger protein 160;Zinc finger protein 180;Zinc finger protein 143;Zinc finger protein 432;Zinc finger protein 606;Zinc finger and SCAN domain-containing protein 32;Zinc finger protein 577;Zinc finger protein 672;Zinc finger protein 554;Zinc finger protein 329;Zinc finger protein 572;Zinc finger protein 79;Zinc finger protein 14;Krueppel-like factor 6 1 T(0.156)HT(0.844)GEKPYR 46.592 0.01433 3606400.0 2144.2 1689.8 1827.1 1725.3 2460.3 1950.7 2018.1 1793.6 1996.5 2030.6 2383.2 True False 2361.8776055233875 1832.2053763536148 1951.0979932448458 1831.867862559405 2287.4970155742294 1934.8141459525232 2094.8998998466927 1757.8252409480197 1912.5940480157694 1902.3875694556355 2090.081508349521 1.130040908016308 0.8766191026686114 0.9335033037948715 0.8764576191126536 1.0944534968785031 0.9257122931441999 1.002305360569874 0.8410319090072833 0.9150810819459819 0.9101977898258609 1.0 11.029343489838443 THTDS(ph)SEKELEPEAAEEALENGPK ddPTM_A549_MK2206_60min_R1 1 THTDSSEKELEPEAAEEALENGPK 24 1 Q9H3P7 Q9H3P7 ACBD3 Golgi resident protein GCP60 1 T(0.072)HT(0.057)DS(0.436)S(0.436)EKELEPEAAEEALENGPK 200.99 9.137399999999998e-62 15394000.0 881.6 805.02 474.67 333.32 1081.3 801.07 872.08 855.33 1157.1 1255.5 1630.6 True False 1030.392526949393 845.9920794815711 541.9853435592973 414.9834149633035 922.2422023894484 885.8386956927699 1030.5256476136374 976.5756468382671 895.0186975090089 971.8816780173803 1225.6770177294209 0.8406721444921972 0.6902243145986208 0.4421926296401728 0.33857485206997234 0.7524349311027398 0.7227341974101751 0.8407807543970243 0.7967642639227938 0.7302239371078689 0.7929345691883829 1.0 10.25936314435256 -7.416536512677946 1.59793883258321 0.8622837295892256 0.5838948094418623 0.35191145602917806 0.14224093439048868 0.3095758200723059 1.5582383148332395 0.02615259638577681 0.04710170772848057 3.832335192439262e-08 7.416536512677946 -0.2783889201473633 THTDS(ph)SEKELEPEAAEEALENGPK ddPTM_A549_PD325901_60min_R1 3 THTDSSEKELEPEAAEEALENGPK 24 1 Q9H3P7 Q9H3P7 ACBD3 Golgi resident protein GCP60 1 T(0.084)HT(0.084)DS(0.416)S(0.416)EKELEPEAAEEALENGPK;T(0.005)HT(0.004)DS(0.526)S(0.466)EKELEPEAAEEALENGPK;T(0.014)HT(0.095)DS(0.445)S(0.445)EKELEPEAAEEALENGPK 288.57 3.315199999999999e-157 67467200.0 6612.9 6896.8 5982.2 7144.1 9566.7 8243.0 7454.3 6898.6 8945.0 7715.700000000001 9722.6 True False 7284.236739840319 7478.017540321703 6388.188065890931 7585.374831571696 8894.767995323322 8175.871740957939 7737.97746564948 6761.002011152997 8569.072757075412 7228.529385230401 8526.781836639413 0.8542773674049098 0.8770035030319187 0.7491909829850476 0.8895941020769982 1.043156511534361 0.9588461271316195 0.9074909636364266 0.7929136854541188 1.0049597751233972 0.8477441458827472 1.0 13.057785629446563 -6.060956785394496 0.21074328185524274 1.0259171399897977 0.716830315654496 0.0 0.09060113932077385 7.668122521780027 0.3952401181494783 0.08608491935453982 0.6258070139605435 8.690468997621602e-07 6.060956785394496 -0.30908682433530177 THTDTESEAS(ph)ILGDSGEYK ddPTM_A549_MK2206_60min_R1 1 THTDTESEASILGDSGEYK 19 0 J3KQ48;Q9Y3E5 J3KQ48 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial 1 THTDTES(0.003)EAS(0.997)ILGDSGEYK 137.09 1.7817e-17 18679000.0 1149.0 1106.1 1109.4 685.89 1092.8 1220.2 1132.9 1221.3 2057.1 1822.8 1722.6 True False 1342.9231096470658 1162.3957654649155 1266.7296019227779 853.933080790772 932.0505676234064 1349.3207540967933 1338.733265504873 1394.4230150743856 1591.1701345136828 1411.0282140104189 1294.8308786585922 1.0371417084509877 0.8977201460233357 0.978297338131968 0.6594939114175453 0.7198241739407576 1.0420826196967523 1.0339058849845801 1.0769151694304417 1.2288632907504413 1.0897393916587808 1.0 10.338547960601721 -7.444076769762648 5.36267089896344 1.1006217545692405 0.8564785307846826 0.4882078100671522 0.11227989595276039 0.16223132932516823 8.133814265071605 0.019748935372983074 0.031618572045684 3.596857482777671e-08 7.444076769762648 -0.24414322378455788 THTDTESEAS(ph)ILGDSGEYK ddPTM_A549_PD325901_60min_R1 1 THTDTESEASILGDSGEYK 19 0 J3KQ48;Q9Y3E5 J3KQ48 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial 1 THTDTESEAS(0.999)ILGDSGEYK 126.02 1.9303000000000002e-15 28873000.0 2569.8 2975.1 2983.6 2697.5 3142.7 3277.9 3522.1 3435.3 3400.4 3132.1 3788.4 True False 2830.6842042132284 3225.8221181143567 3186.0850378443015 2864.118448533008 2921.9675937264274 3251.2058691842803 3656.135442867072 3366.7802465592827 3257.493013209529 2934.3386714724716 3322.4508166462406 0.8519867893998163 0.9709164397414848 0.9589562686319643 0.8620499163398049 0.8794615044673346 0.9785565080136005 1.100433277913098 1.0133423886039008 0.9804488291861966 0.8831849840397221 1.0 11.698032127623053 -7.4013358013856525 5.602349659965112 1.0015743170683302 0.9094920995683782 0.3607256623198085 0.058111043185153845 0.15999112509474733 6.740257639463669 0.007126587748959826 0.011442058285666969 3.968845551901155e-08 7.4013358013856525 -0.09208221749995205 THTRVS(ph)VQR ddPTM_A549_MK2206_60min_R1 3 THTRVSVQR 9 1 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 1 T(0.004)HT(0.004)RVS(0.993)VQR;T(0.008)HT(0.009)RVS(0.983)VQR;T(0.032)HT(0.136)RVS(0.832)VQR 61.435 0.0021287 582692000.0 2330.56 2256.57 1638.81 1548.96 2803.78 2223.19 1860.0700000000002 2074.6 2953.1000000000004 3180.2700000000004 3291.7 True False 2723.90155127856 2371.4197744102385 1871.2179006012864 1928.4552695354562 2391.3476761449065 2458.446490165916 2198.0206418639336 2368.6809031960374 2284.2275651316672 2461.844798206559 2474.280043701664 1.1008865218035093 0.9584282023559707 0.7562676283812392 0.7794005672253562 0.9664822226700394 0.9936007431430195 0.8883475609234472 0.9573212657255868 0.9231887760426393 0.9949741964226082 1.0 11.272793081174841 THTRVS(ph)VQR ddPTM_A549_PD325901_60min_R1 4 THTRVSVQR 9 1 H0YEN5;P15880;E9PQD7 H0YEN5 RPS2 40S ribosomal protein S2 1 T(0.001)HT(0.07)RVS(0.929)VQR;T(0.001)HT(0.033)RVS(0.966)VQR;T(0.001)HT(0.005)RVS(0.993)VQR;T(0.084)HT(0.382)RVS(0.534)VQR 68.44 0.0012439 1264536000.0 7749.470000000001 7402.6 7595.879999999999 7296.9 8272.7 7012.82 7010.4 7133.1 8827.5 8652.7 10515.4 True False 8536.190489541705 8026.4430814269635 8111.382094537051 7747.612940537715 7691.65409126567 6955.709919013058 7277.1846082380725 6990.824724691303 8456.510873458157 8106.367045320981 9222.072462612683 0.9256260481739196 0.8703513352304555 0.8795617392317729 0.8401162506527039 0.8340483250861993 0.7542458538698635 0.7891051211905562 0.758053545234316 0.9169859494969056 0.8790179298834511 1.0 13.170875286460642 -9.157197115895826 2.025241123787217 0.9716840736157124 0.8314363424767569 0.31660087059766473 0.058806092629210334 0.1630286547192568 1.3813354729403793 0.011636198073917274 0.01095776264853781 6.963104037120488e-10 9.157197115895826 -0.1402477311389555 THTTALAGRS(ph)PS(ph)PASGR ddPTM_A549_MK2206_60min_R1 2 THTTALAGRSPSPASGR 17 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 T(0.005)HT(0.006)T(0.006)ALAGRS(0.972)PS(0.856)PAS(0.155)GR;THT(0.001)T(0.001)ALAGRS(0.938)PS(0.963)PAS(0.098)GR 61.276 0.00099964 19242700.0 2250.57 1923.74 1458.35 1303.86 2598.64 2088.04 1885.12 1874.3 2741.3999999999996 3266.1 2719.5 True False 2630.4111948462996 2021.6501490421088 1665.1659590446027 1623.3057585324989 2216.383498397591 2308.995006871224 2227.621902611481 2139.9877648030156 2120.477277116236 2528.2857415950343 2044.1730956182757 1.2867849598865362 0.9889818789688382 0.8145914661600419 0.7941136501659698 1.084244530538266 1.1295496510645793 1.0897423057697175 1.0468720918938423 1.0373276517832661 1.2368256616890534 1.0 10.99730165002606 THTTALAGRS(ph)PS(ph)PASGR ddPTM_A549_PD325901_60min_R1 2 THTTALAGRSPSPASGR 17 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 THT(0.002)T(0.002)ALAGRS(0.951)PS(0.96)PAS(0.085)GR;T(0.001)HT(0.002)T(0.002)ALAGRS(0.966)PS(0.946)PAS(0.082)GR 58.835 0.0016012999999999997 43249000.0 4257.9 5316.799999999999 4946.7 4777.8 5653.9 5317.0 5403.8 4838.200000000001 5127.9 5906.0 6034.8 True False 4690.158873499691 5764.86539531122 5282.412808923581 5072.913854828914 5256.78956889612 5273.700114845735 5609.444566072823 4741.698305505526 4912.392195752602 5533.094152075737 5292.557857749114 0.886179990764311 1.0892399384676683 0.998083148243589 0.9584994611634509 0.9932417765068692 0.9964369321204928 1.0598740187336335 0.8959180859143475 0.9281697673951941 1.0454480235817245 1.0 12.369749420388853 -8.25850558582971 24.992265413604592 0.9598702525953868 0.9992371917785275 0.048137037767397306 0.060522486926977564 477.28433832050695 4065870.0970043805 0.008905575462450525 0.011237736800799489 5.5143510986144535e-09 8.25850558582971 0.039366939183140714 THVGS(ph)YK ddPTM_A549_PD325901_60min_R1 2 THVGSYK 7 0 H0Y8R1;F5H5I6;H0YAK1;Q12849-5;Q12849 H0Y8R1 GRSF1 G-rich sequence factor 1 1 T(0.002)HVGS(0.998)YK;THVGS(1)YK 88.948 0.0039099 9371200.0 3984.7 2568.5 1973.17 2162.71 3744.9 2289.8 2028.31 2624.8 2319.4 2514.7 3435.5 True False 4389.2238106189 2784.9565091515346 2107.0811818351126 2296.2956848292197 3481.8711432036453 2271.15262798077 2105.4984469838196 2572.4463048842335 2221.9236839307687 2355.921412838612 3012.9552794288247 1.4567835907113027 0.9243271973421018 0.6993403440872041 0.7621406465961671 1.1556331974046805 0.7537956648368572 0.6988150343150681 0.8537950504767864 0.7374565759741332 0.7819304285476256 1.0 11.556963544177579 -5.272407592522045 4.165631080454693 0.8533794877043043 1.5000841400079556 0.6398371161501946 0.13407720529977873 0.10951462721594951 4.187914198459851 0.01975466955338073 0.207059203357775 5.340628972959546e-06 5.272407592522045 0.6467046523036514 TIAATPIQTLPQSQS(ph)TPK ddPTM_A549_MK2206_60min_R1 1 TIAATPIQTLPQSQSTPK 18 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 TIAATPIQTLPQS(0.013)QS(0.627)T(0.36)PK 139.6 1.5459e-13 3216200.0 1073.3 1007.0 894.26 896.9 1261.0 794.78 1297.7 1026.3 1230.6 1875.5 1428.3 True False 1254.4468003343743 1058.2519987552382 1021.079514886843 1116.6405402633704 1075.5085704365988 878.8830920677344 1533.4752922991206 1171.7811679119325 951.8710648643907 1451.8232474086797 1073.6136909253848 1.168434056809692 0.9856916018303512 0.9510678966907912 1.0400766585799583 1.001764954682704 0.8186213528165747 1.4283306046305773 1.0914364988228995 0.8866048122429774 1.3522771362549437 1.0 10.068259258950878 -8.75348718046428 24.802878675601775 0.9464522714013641 1.056060801044603 0.0 0.1904929672183801 282.7546872438766 881909.5372722709 0.02489635712545884 0.027979579743979854 1.7640578352938224e-09 8.75348718046428 0.10960852964323897 TIAATPIQTLPQSQS(ph)TPK ddPTM_A549_PD325901_60min_R1 2 TIAATPIQTLPQSQSTPK 18 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 TIAATPIQTLPQS(0.001)QS(0.5)T(0.5)PK;TIAATPIQTLPQS(0.044)QS(0.478)T(0.478)PK 185.26 9.7908e-40 13625800.0 3022.2 2625.9 2803.8 2673.6000000000004 3532.2 3845.8 3181.8 3435.6 3148.1 3193.7 3326.5 True False 3329.01151917395 2847.1938085968504 2994.082728619067 2838.742199813846 3284.110457428478 3814.481079870926 3302.8851401477677 3367.0742628239404 3015.796304812647 2992.049236959748 2917.361588420895 1.1411034999524596 0.9759482060425617 1.0262981251630519 0.973051201839672 1.1257125172495661 1.3075105585165474 1.1321480180095018 1.1541504749318596 1.033741006525363 1.02560109409656 1.0 11.51044849485841 -8.92407187703145 6.365966220324776 1.014653869804031 1.1015851368469267 0.1546707600943774 0.08872120541752483 0.30727532352803133 20.01041680179636 0.016869972064527925 0.01782362151346683 1.1910448702376772e-09 8.92407187703145 0.08693126704289567 TIAATPIQTLPQSQST(ph)PK ddPTM_A549_MK2206_60min_R1 1 TIAATPIQTLPQSQSTPK 18 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 TIAATPIQTLPQS(0.008)QS(0.301)T(0.691)PK 122.08 2.4966e-10 4823200.0 1090.4 646.05 868.05 630.5 922.09 730.69 808.77 800.18 1544.2 1258.1 1145.7 True False 1274.4328622795128 678.9311854973407 991.1525427700262 784.9725283042204 786.4517824852373 808.0111308072333 955.7130401115515 913.6079654484747 1194.4411655806855 973.8943362116028 861.1910702886037 1.4798491371402898 0.7883630113231623 1.1509089875233722 0.9114963628700414 0.9132140469381324 0.9382483849216543 1.1097572572266357 1.0608655813654744 1.3869641787860185 1.1308690600858526 1.0 9.750189550017053 -8.339513366226138 2.712702665011253 1.182430343478055 1.0191804688030144 0.06360894687118313 0.19148331474491842 0.4747486595590571 6.852173560142419 0.03470154630559616 0.04307993396344798 4.57600651152458e-09 8.339513366226138 -0.1632498746750406 TIAATPIQTLPQSQST(ph)PK ddPTM_A549_PD325901_60min_R1 2 TIAATPIQTLPQSQSTPK 18 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2 P14859-5 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 TIAATPIQTLPQS(0.001)QS(0.167)T(0.832)PK;TIAATPIQTLPQS(0.001)QS(0.178)T(0.821)PK 134.29 9.049e-13 7845700.0 4601.700000000001 5378.9 4914.2 5405.4 6207.5 6907.9 5926.6 6262.3 5937.6 5812.400000000001 6473.0 True False 5068.861196407509 5832.198780251194 5247.707163485209 5739.279281445899 5771.506614712444 6851.644352706947 6152.140006159963 6137.393513820689 5688.063320560197 5445.404072049612 5676.862035727779 0.8928984295384019 1.0273631353987098 0.9244028004306517 1.0109950260064966 1.0166719885720337 1.206942199684541 1.083721951923613 1.0811243033905913 1.001973147270785 0.9592278335775174 1.0 12.470877965011892 -5.259952687562521 23.890567322715484 1.0220787379378364 0.8928983566428838 0.2281452834872807 0.07136544980874561 85.39144364880073 1371935.60555768 0.009927710350213111 0.08596345297682687 5.496007446034199e-06 5.259952687562521 -0.12918038129495268 TIANMFGSSEKETIELS(ph)PTGRPK ddPTM_A549_MK2206_60min_R1 1 TIANMFGSSEKETIELSPTGRPK 23 2 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-4 A0A087WSW7 HELLS Lymphoid-specific helicase 1 T(0.004)IANMFGS(0.013)S(0.013)EKET(0.179)IELS(0.746)PT(0.046)GRPK 42.973 0.022788 6159500.0 2184.8 3145.5 2848.4 2529.2 4216.6 3503.3 3040.5 2790.9 4452.7 4076.2 3745.5 True False 2553.5408267684156 3305.592514483219 3252.345951069803 3148.8541135401024 3596.3437256962425 3874.0168806976662 3592.9194931305233 3186.5186217727864 3444.170559500787 3155.383588956149 2815.388979458816 0.906993969714006 1.1741157398146211 1.1552030553500925 1.1184437164861625 1.277387867870231 1.3760147919035841 1.2761716122868276 1.1318217997661235 1.2233373734960196 1.120762925470671 1.0 11.459118546210114 -4.022084675080382 12.667703530681893 1.1437895436061245 1.1572193296551851 0.0 0.12603871469487712 0.0 0.0 0.018535861401526993 0.0 9.504194708066949e-05 4.022084675080382 0.013429786049060644 TIANMFGSSEKETIELS(ph)PTGRPK ddPTM_A549_PD325901_60min_R1 3 TIANMFGSSEKETIELSPTGRPK 23 2 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-4 A0A087WSW7 HELLS Lymphoid-specific helicase 1 T(0.002)IANMFGS(0.005)S(0.005)EKET(0.016)IELS(0.916)PT(0.056)GRPK;T(0.002)IANMFGS(0.011)S(0.01)EKET(0.057)IELS(0.828)PT(0.093)GRPK;TIANMFGSSEKET(0.002)IELS(0.984)PT(0.014)GRPK 94.802 1.1515000000000001e-07 36138400.0 10022.4 10467.400000000001 13181.400000000001 12483.300000000001 13792.1 14600.599999999999 13312.599999999999 14635.2 17000.4 13103.400000000001 12340.599999999999 True False 11039.866669899073 11349.52453334349 14075.969070197361 13254.365089368708 12823.390476161976 14481.697554413495 13819.218277934246 14343.289454907706 16285.932308483507 12276.049087759766 10822.784433508768 1.0200578915457457 1.0486695547777765 1.3005866611013988 1.2246723725117767 1.184851324993508 1.3380750252750344 1.2768634876574019 1.325286440197311 1.504782101920104 1.1342782592760046 1.0 13.401784096054469 -5.749483408825869 19.575011200716627 1.256447172602774 1.0343603893249314 0.32736497979627843 0.1216076526350398 20.47820143533838 33515.82707652068 0.024210579468376608 0.09126628725914965 1.7803959232904608e-06 5.749483408825869 -0.2220867832778426 TIAPALVSK ddPTM_A549_MK2206_60min_R1 2 TIAPALVSK 9 0 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 ; 158.76 2.8732e-05 37012000.0 13046.4 13762.599999999999 14004.400000000001 11949.2 17814.2 14598.6 13873.599999999999 13186.900000000001 19635.1 19754.5 18446.6 False True 15248.313366144019 14463.057555182566 15990.434502584587 14876.754536419972 15193.754778328044 16143.414162233601 16394.253537212815 15056.183458187525 15187.78120081162 15291.944729903895 13865.800119739692 1.099706705308419 1.0430741414332523 1.1532284011378624 1.0729099228281145 1.0957719458755102 1.1642612775912904 1.1823517860951678 1.085850317195412 1.0953411321132434 1.1028533945281607 1.0 13.759243248395281 -10.230713910096675 0.7168990516361586 1.0012405325953546 1.1122532813450485 0.06236471324269355 0.048823466252547854 0.43035104657019163 0.41766922207685975 0.02510601015745173 0.008466379296651914 5.878764864919947e-11 10.230713910096675 0.11101274874969391 TIAPALVSK ddPTM_A549_PD325901_60min_R1 2 TIAPALVSK 9 0 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 ; 129.38 0.00013958 70132000.0 22661.1 21630.6 23407.4 23669.6 26870.0 23828.9 24351.8 27067.2 26367.0 24762.8 25970.2 False True 24961.63818977989 23453.486574597304 24995.96692413082 25131.617434438136 24982.74389646772 23634.84533884661 25278.521074816254 26527.323462192388 25258.88668371242 23199.27258195411 22776.030038661764 1.095960891665848 1.0297442765392202 1.09746812248231 1.1034239677317697 1.0968875547696466 1.0377069796065 1.1098738907485883 1.1647035684956024 1.1090118269442069 1.018582805808295 1.0 14.4752286804732 -10.713869907390828 1.027958697827585 1.001273564614512 1.0934741379597315 0.46638285544963665 0.03465991590674781 0.3573352031533584 0.6852980077796184 0.023071066232362242 0.006346987647318906 1.932547123465114e-11 10.713869907390828 0.09220057334521958 TIAQDYGVLK ddPTM_A549_MK2206_60min_R1 2 TIAQDYGVLK 10 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 146.11 1.0727999999999999e-07 21405300.0 10306.6 10960.8 11076.7 11163.3 13899.9 10631.1 10881.3 10405.8 16428.9 14548.5 16698.4 False True 12046.102107822839 11518.657902637957 12647.542619089627 13898.309001139587 11855.243123086186 11756.075945646959 12858.2913601714 11880.854016425987 12707.78038156231 11261.983745627927 12551.726427605154 0.9597167511020405 0.9176951050578064 1.0076337061707896 1.1072826579914041 0.9445109556413543 0.9366102753635299 1.0244241247874886 0.9465513835846748 1.0124328676901326 0.8972457940813081 1.0 13.615598192908307 -5.769795057016524 24.975315219365935 1.0014035084331332 0.9387059258616725 0.04626865018116311 0.055659842127001834 173.84544464269396 519635.1242092826 0.006089451116649066 0.019399473585588974 1.6990452404827084e-06 5.769795057016524 -0.06269758257146074 TIAQDYGVLK ddPTM_A549_PD325901_60min_R1 2 TIAQDYGVLK 10 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 178.95 9.758599999999999e-11 45802000.0 27290.0 26294.0 26687.0 27232.0 32147.0 29619.0 28330.0 29965.0 31855.0 32269.0 32948.0 False True 30060.460710163818 28509.887658801028 28498.140301967687 28914.05879164073 29889.105621129413 29377.792684148153 29408.11365277085 29367.324567912263 30516.245128746476 30231.529832938024 28895.604874580407 1.0403125610500072 0.9866513534686828 0.9862448087057568 1.0006386409677328 1.0343824173559002 1.0166872370957678 1.0177365651425176 1.0163249634461478 1.0560860470372695 1.0462328082127408 1.0 14.818562449858321 -6.748014907113755 24.234206761606703 1.025301752767911 1.0010312917926514 0.2387261248252629 0.01974620589036213 211.70082247582928 382164.80690515455 0.003347595048033114 0.0069347525691915 1.786426254900829e-07 6.748014907113755 -0.024270460975259533 TIAS(ph)DS(ph)EEEAGK ddPTM_A549_PD325901_60min_R1 1 TIASDSEEEAGK 12 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 T(0.11)IAS(0.891)DS(0.999)EEEAGK 86.738 0.00032968 9811000.0 6211.8 6422.6 5372.1 6380.0 7222.3 6128.9 5524.4 5912.8 6473.5 6815.5 7410.9 True False 6842.417363114535 6963.855042116659 5736.683011061593 6774.078109968703 6715.030563582383 6078.988270430322 5734.634065067676 5794.864565498131 6201.441307202648 6385.168166859495 6499.406281565733 1.0527757562289475 1.0714601827351897 0.8826472392305352 1.0422610645501609 1.0331759968026966 0.9353143975123016 0.8823319879744739 0.8915990652767941 0.9541550471758932 0.9824232999512199 1.0 12.666092219147396 -7.258193301595696 24.796141137812 0.9599262137568505 1.0135182889427883 0.26676081160855736 0.05774454387320335 400.5140029536303 3059445.486082279 0.00924574014805665 0.015608285271868524 5.518317679487117e-08 7.258193301595696 0.05359207518593778 TIAS(ph)DS(ph)EEEAGKELSDK ddPTM_A549_PD325901_60min_R1 1 TIASDSEEEAGKELSDK 17 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 T(0.053)IAS(0.947)DS(0.987)EEEAGKELS(0.013)DK 100.9 5.0265e-09 28884000.0 8661.6 9557.6 8807.6 9506.9 11440.0 10768.0 9578.0 10155.0 9765.2 10857.0 11986.0 True False 9540.91925566709 10363.052494400117 9405.33670040135 10094.11962126356 10636.49386585749 10680.30897811902 9942.4960312827 9952.450558556618 9354.802603397753 10171.487167132793 10511.797985514158 0.9076391373592801 0.9858496623204688 0.8947410056169675 0.9602657542671404 1.011862469247903 1.0160306536367116 0.9458416195767853 0.9467886057429612 0.8899336361190722 0.9676258220667546 1.0 13.359721835046704 -3.385083774390315 7.557405322944278 0.9527535580166205 0.9360000671452285 0.0 0.04320512939952981 0.0 0.0 0.0065981297297648565 0.0 0.0004120180341157311 3.385083774390315 -0.016753490871391996 TIAS(ph)DS(ph)EEEAGKELSDKK ddPTM_A549_PD325901_60min_R1 2 TIASDSEEEAGKELSDKK 18 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 T(0.114)IAS(0.909)DS(0.978)EEEAGKELSDKK;T(0.034)IAS(0.966)DS(0.991)EEEAGKELS(0.009)DKK 76.733 0.00013734 21833800.0 3674.8999999999996 4436.9 3909.1 4078.8 4565.6 4405.1 3868.6 4734.799999999999 4956.4 4150.1 5685.9 True False 4047.973142681607 4810.813134301905 4174.395033327911 4330.738212373096 4244.928006464939 4369.226326106251 4015.8216899791464 4640.360699621253 4748.099744345283 3888.061977739504 4986.570345889785 0.8117750000294645 0.9647538890667111 0.8371274731476885 0.8684803205358843 0.8512720591546152 0.8761986742466424 0.8053273916589214 0.9305715908422112 0.9521774315805928 0.7797066336273117 1.0 12.283832187172314 -8.655758758020811 2.0622969254952723 0.9799618429311193 0.8633368885089494 0.0 0.07337087269670489 0.1477992006705991 1.2399635731876897 0.007367705007375381 0.008251534236961823 2.2092315766087715e-09 8.655758758020811 -0.11662495442216991 TIAS(ph)DSEEEAGKELSDK ddPTM_A549_PD325901_60min_R1 2 TIASDSEEEAGKELSDK 17 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 TIAS(1)DSEEEAGKELSDK;TIAS(0.952)DS(0.048)EEEAGKELSDK 190.37 3.4009000000000003e-40 20820100.0 6825.5 7161.4 7067.799999999999 6488.8 9026.7 6641.0 7459.4 7974.700000000001 7767.5 8689.1 8286.4 True False 7518.419735332467 7764.916310935481 7547.4634101340425 6889.598438865978 8392.69573242446 6586.917897816534 7743.271548940305 7815.638352468876 7441.0589872088685 8140.468743108914 7267.225331817497 1.0345653797764032 1.0684843191718556 1.0385619085030433 0.9480369913262238 1.154869341353626 0.9063869079409952 1.0655059111816134 1.0754638800382736 1.0239202236691753 1.120161873537644 1.0 12.82718892471976 -9.76398345380946 1.1772413603124936 1.0044236027685083 1.0350330691476597 0.0 0.07116979458981884 1.078620542337583 3.0438929773292536 0.016326979249880882 0.010800575868845403 1.7219341777266512e-10 9.76398345380946 0.030609466379151407 TICTFDSSGFES(ph)MSPIKETVSSR ddPTM_A549_MK2206_60min_R1 4 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICTFDS(0.001)S(0.001)GFES(0.492)MS(0.492)PIKET(0.004)VS(0.005)S(0.006)R;TICT(0.002)FDS(0.013)S(0.012)GFES(0.479)MS(0.479)PIKET(0.01)VS(0.002)S(0.002)R;TICTFDS(0.016)S(0.014)GFES(0.484)MS(0.484)PIKETVSSR;TICTFDSSGFES(0.563)MS(0.436)PIKETVSSR 97.441 8.0373e-08 16912800.0 4156.3 5328.8 4889.1 4623.62 6486.900000000001 5340.200000000001 4306.8099999999995 4773.7 7509.6 7128.599999999999 6501.1 True False 4857.781828221151 5600.013158854929 5582.447896845726 5756.407107562187 5532.685603144467 5905.296419462131 5089.301628748385 5450.386593843119 5808.687590366998 5518.244308972282 4886.697448767774 0.9940827888671694 1.1459709174888706 1.1423764117529707 1.177974934587718 1.132193196151234 1.2084432239510152 1.0414603486515621 1.1153517587256163 1.188673465313821 1.129237970393227 1.0 12.25464407009908 -10.949133633405257 1.1742252547548637 0.9989862585521249 1.1348887603035818 0.0 0.07035963903756945 0.3857881847119468 0.9337957131909239 0.042893733216368204 0.009698331010553703 1.1242589836783422e-11 10.949133633405257 0.1359025017514569 TICTFDSSGFES(ph)MSPIKETVSSR ddPTM_A549_PD325901_60min_R1 1 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICT(0.001)FDS(0.049)S(0.046)GFES(0.449)MS(0.449)PIKET(0.001)VS(0.001)S(0.002)R 51.645 0.0019416000000000001 5118500.0 1602.3 1648.7 1866.4 1744.4 1609.0 2104.4 1850.3 2020.5 1327.7 1908.6 1907.6 True False 1764.9643164490838 1787.641735113154 1993.0651275749435 1852.1476261801592 1495.9893907486614 2087.2624641115954 1920.7141790230098 1980.1995424484146 1271.9013862011216 1788.0906702762852 1672.97729327272 1.054984023720021 1.068539150113702 1.1913282598570478 1.107096691406338 0.8942078274249434 1.247633469088179 1.148081439447191 1.1836380268943751 0.7602621932261832 1.0688074951563613 1.0 10.70820214898327 -8.752866146623589 24.999874423864977 0.8867904770914371 1.1114471243351305 0.26589119670938244 0.11508037631110463 128.9518926020453 376028.31431663455 0.0201405820879277 0.022661674935687114 1.76658221295344e-09 8.752866146623589 0.22465664724369339 TICTFDSSGFESMS(ph)PIKETVSSR ddPTM_A549_MK2206_60min_R1 1 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICT(0.001)FDS(0.01)S(0.009)GFES(0.171)MS(0.804)PIKET(0.003)VSSR 56.766000000000005 0.00087874 3028200.0 1063.1 1197.4 1089.0 944.76 1025.6 1179.4 997.33 914.62 1292.6 1399.9 1284.3 True False 1242.5252897004311 1258.3425454910853 1243.4365751702762 1176.2262424118876 874.7355986041043 1304.2033251776413 1178.5319513513773 1044.2701859062768 999.8281638580459 1083.6616177272256 965.372865123203 1.2870936553016303 1.303478263117011 1.2880376278357337 1.2184165154277202 0.9061116488834277 1.3509840314510975 1.2208049282605125 1.0817273031317332 1.0356911821117383 1.1225316733850048 1.0 9.914942465591459 -6.317019292750314 0.20964985208271336 0.9590164011805282 1.4918017216183905 0.29349244692767784 0.1159950151093217 5.148686489633424 0.29448209145103 0.12355262202673359 0.7287328891015591 4.819263884376088e-07 6.317019292750314 0.5327853204378623 TICTFDSSGFESMS(ph)PIKETVSSR ddPTM_A549_PD325901_60min_R1 7 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICTFDSSGFES(0.025)MS(0.974)PIKET(0.001)VSSR;TICTFDSSGFES(0.348)MS(0.652)PIKETVSSR;TICTFDSS(0.001)GFES(0.055)MS(0.943)PIKET(0.001)VSSR;TICTFDSSGFES(0.147)MS(0.852)PIKETVSSR;TICTFDSSGFES(0.019)MS(0.981)PIKETVSSR;TICTFDSSGFES(0.009)MS(0.99)PIKETVSSR;TICTFDSSGFES(0.003)MS(0.997)PIKETVSSR 165.48 3.951499999999999e-34 53825000.0 18634.5 19847.0 20790.8 20034.8 20417.0 20497.2 19086.8 20528.7 16064.300000000001 19428.199999999997 20076.6 True False 20526.260722006155 21519.57634305257 22201.788713236772 21272.30409366788 18982.98035482625 20330.27759902501 19813.158618697726 20119.238974046402 15389.173336108053 18201.500136362647 17607.30547605319 1.1657809168996864 1.2221958875150014 1.260941871170027 1.2081521572167457 1.0781309145027356 1.15465013239392 1.1252805629824851 1.1426642765646093 0.8740220561878758 1.033747052387862 1.0 14.10388652359809 -8.684956016414011 6.106615865019004 0.9407080699052565 1.1723805907055818 0.6809476545190282 0.06039228700708802 0.07913511255732159 4.908923411083411 0.011312537068480918 0.012794777321335068 2.0655893397392235e-09 8.684956016414011 0.2316725208003253 TIDDLEDKLK ddPTM_A549_MK2206_60min_R1 2 TIDDLEDKLK 10 1 P06753-2;A0A087WWU8;J3KN67;P06753-5;P06753-7 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 95.81 0.00055539 8852200.0 2980.2 3374.3999999999996 3108.4 2744.7 4341.1 3304.3 3282.8 3347.3 4475.1 4481.1 4653.8 False True 3483.1849011054696 3546.1425467722706 3549.2178606605044 3417.1516232142644 3702.529940620396 3653.9588327831784 3879.2422667485184 3821.790025676322 3461.496995266238 3468.81639774089 3498.1330216541032 0.9957268290096168 1.013724328040409 1.014603458098985 0.9768501089185149 1.0584302877280645 1.0445454218477355 1.1089464702271976 1.0925227834444033 0.9895269773444632 0.9916193513134756 1.0 11.772369435565974 -3.565916983295608 16.638767457837428 1.0152521729565025 0.44436531563963333 0.0 0.043467281383621215 0.0 0.0 0.006296533173962945 0.0 0.0002716958574057073 3.565916983295608 -0.5708868573168692 TIDDLEDKLK ddPTM_A549_PD325901_60min_R1 4 TIDDLEDKLK 10 1 P06753-2;A0A087WWU8;J3KN67;P06753-5;P06753-7 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ;;; 109.6 0.0002114 15851600.0 7059.79 6889.6 6773.200000000001 6860.6 8284.199999999999 7954.700000000001 6781.889999999999 7863.0 7733.599999999999 8402.0 8709.3 False True 7776.494683657289 7470.210771053305 7232.870082560333 7284.3636804469115 7702.34637093851 7889.919560572382 7039.978535142603 7706.166296595827 7408.583686318436 7871.496286105712 7638.111312801471 1.0181174854867443 0.9780180551353362 0.9469448383709786 0.9536865047041565 1.0084098091146407 1.0329673446037477 0.9216910106224299 1.0089099230172642 0.9699496882038957 1.0305553249679784 1.0 12.899000229662642 TIDFDSLS(ph)VGR ddPTM_A549_MK2206_60min_R1 2 TIDFDSLSVGR 11 0 A0A1C7CYX9 A0A1C7CYX9 1 TIDFDS(0.005)LS(0.995)VGR;TIDFDSLS(1)VGR 136.53 3.7281e-08 9234500.0 2684.1000000000004 2779.1 2750.9 2387.8 3807.2 2833.8 2752.6000000000004 2674.8 3882.1 3883.3 4144.799999999999 True False 3137.1104600554313 2920.544319504154 3141.01898497329 2972.8111071924145 3247.165923367344 3133.670835075799 3252.7117897684825 3053.9610912314483 3002.8105484398247 3006.0598329310205 3115.5317693394486 1.0069261661615339 0.9374143920616685 1.0081806951495942 0.9541905932234183 1.0422509426234496 1.0058221411557604 1.0440310131898025 0.9802375059327177 0.9638195886785893 0.9648625196232109 1.0 11.605262712923464 -2.652849792638732 16.51203224963706 0.9890888268830474 0.9798771395522554 0.0 0.033191606510273336 0.0 0.0 0.004186907531465396 0.0 0.0022240789892346876 2.652849792638732 -0.009211687330792029 TIDFDSLS(ph)VGR ddPTM_A549_PD325901_60min_R1 2 TIDFDSLSVGR 11 0 A0A1C7CYX9 A0A1C7CYX9 1 TIDFDSLS(1)VGR;TIDFDSLS(1)VGR 182.35 1.5266e-18 13598700.0 5510.200000000001 6599.799999999999 5929.2 6041.6 6469.299999999999 6062.4 5621.9 7360.700000000001 6495.6 6362.0 6219.799999999999 True False 6069.591447605155 7155.98830800011 6331.59116717604 6414.775910530868 6014.918685873408 6013.029824382312 5835.844480921718 7213.885064142559 6222.612521057471 5960.302234254289 5454.804030560738 1.1127056835772737 1.3118689998592845 1.1607366885598582 1.1759865019149822 1.1026828190663875 1.1023365442083883 1.0698541044235845 1.3224829019936382 1.1407582171962656 1.09267027758678 1.0 12.413311651840354 -10.26310176558412 0.7368071248283554 1.0007577926849556 1.1687219437788627 0.20996542704576593 0.08244260549303777 0.5351358033176282 0.5464692043718494 0.048071979149909995 0.016075551191434705 5.4562999195352476e-11 10.26310176558412 0.16796415109390717 TIDRQS(ph)AR ddPTM_A549_MK2206_60min_R1 2 TIDRQSAR 8 1 A0A1B0GTX1;A0A1C7CYY6;Q6XZF7-2;Q6XZF7 A0A1B0GTX1;Q6XZF7 DNMBP Dynamin-binding protein 1 TIDRQS(1)AR;TIDRQS(1)AR 63.623999999999995 0.0027337 17481700.0 3259.1 2899.7 2344.02 2180.51 2972.0 2271.48 1922.6 2063.42 2785.1099999999997 3687.8 3949.7999999999997 True False 3809.1564026551346 3047.2823443799048 2676.437282764583 2714.7350478868148 2534.822736984592 2511.8465059136083 2271.9115334625017 2355.916103958725 2154.287031906763 2854.723418711665 2968.955651065661 1.2829953863702532 1.026381900748881 0.9014743220579656 0.9143737283217425 0.8537758844847535 0.846037058523262 0.7652224554607387 0.793516771836287 0.7256043151515297 0.9615244396415978 1.0 11.535739827813027 -4.831252129262837 0.9903621987337218 0.8521012945742157 1.9228554520987107 0.7354057041174411 0.07581566807131675 2.00732321209359 0.8485877270817201 0.015422346503536043 2.802415543655691 1.4748500618384373e-05 4.831252129262837 1.070754157524495 TIEAAEALLHMES(ph)PTCLR ddPTM_A549_PD325901_60min_R1 2 TIEAAEALLHMESPTCLR 18 0 D6RHI1;Q15723-4;Q15723-2;Q15723-3;Q15723-1;Q15723 D6RHI1 ELF2 ETS-related transcription factor Elf-2 1 TIEAAEALLHMES(0.733)PT(0.267)CLR;TIEAAEALLHMES(0.836)PT(0.164)CLR 83.77600000000001 3.3088e-05 3411000.0 845.99 670.87 770.89 753.87 873.73 812.4000000000001 406.99 994.47 629.54 919.52 1189.12 True False 931.8742820150782 727.40656931847 823.2072311381529 800.4348377370072 812.3622190048652 805.7840837503617 422.4782271634733 974.634515703377 603.0826230843215 861.4613502737348 1042.865778452745 0.8935706792466236 0.6975073728065867 0.7893702604370718 0.7675338996400648 0.7789710198469951 0.7726632711506449 0.40511275361848204 0.9345733035265577 0.5782936170166493 0.8260519887342049 1.0 10.026337773084203 -11.012683079228966 1.2852011937774146 1.0005957925022393 0.7182614114294796 0.13956424615415508 0.146385890222079 0.3882386160961158 1.1378628782405678 0.09567632208305929 0.0214870157830758 9.712184427882163e-12 11.012683079228966 -0.28233438107275965 TIEGSS(ph)PADNR ddPTM_A549_PD325901_60min_R1 1 TIEGSSPADNR 11 0 Q9Y217 Q9Y217 MTMR6 Myotubularin-related protein 6 1 TIEGS(0.119)S(0.881)PADNR 143.0 2.7697e-11 17286000.0 917.3 939.29 793.52 830.74 828.31 766.67 1005.9 813.72 541.75 789.01 982.99 True False 1010.4236207194307 1018.4472647385417 847.3730390233976 882.0529230525707 770.1323631143715 760.4264937086286 1044.1800749496006 797.4897162490089 518.9821314863731 739.1917739467108 862.0884616870153 1.1720648931342141 1.1813721097084966 0.9829304957465488 1.0231582514472901 0.8933333379817014 0.8820747840895063 1.2112214944928636 0.9250671499400496 0.6020056578309613 0.8574430662256994 1.0 9.751692106292143 -6.029404933081254 0.4770644056479051 0.833736500944487 1.2911028353578329 0.30023938690349705 0.14064956012908575 2.3903859471122746 0.5624724063019413 0.040408623402567054 0.5357335712712146 9.345339150344373e-07 6.029404933081254 0.45736633441334584 TIEKFEK ddPTM_A549_MK2206_60min_R1 2 TIEKFEK 7 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 69.825 0.02196 50714000.0 10993.4 12592.400000000001 12738.2 10233.3 14788.0 9064.6 10643.2 9436.7 15115.0 15726.8 15988.8 False True 12848.817157174974 13233.299373510898 14544.668302877879 12740.4589593903 12612.70478954515 10023.809955405499 12576.931672187724 10774.381123681707 11691.476633695152 12174.104957263042 12018.339691568846 1.0691008481137148 1.1010921402724516 1.2102061246514202 1.0600847776276483 1.0494548426180086 0.8340428222741484 1.0464782985798566 0.896494973531177 0.9728029772612439 1.0129606309766288 1.0 13.55294998406889 -6.788893912891935 2.690540614001837 0.9743005534631473 1.122537777826298 0.5225994868110158 0.06612661895917993 0.15733030417061247 2.3276762273600022 0.008934236828614998 0.019108963310653676 1.6259458845144127e-07 6.788893912891935 0.14823722436315068 TIEKFEK ddPTM_A549_PD325901_60min_R1 2 TIEKFEK 7 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y488;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 66.692 0.02434 118093000.0 14476.1 13581.9 14587.1 15630.6 16308.0 17726.199999999997 16353.699999999999 16983.7 16877.300000000003 15366.2 16607.0 False True 15945.703015258421 14726.49437868219 15577.068325358146 16596.0666623318 15162.582339545783 17581.843704302886 16976.04900258802 16644.9467800451 16168.005773391727 14395.975509587895 14564.444280446673 1.094837723171226 1.0111264182220172 1.0695271323376863 1.1394919258685796 1.0410683749809895 1.207175733296408 1.1655816504704557 1.142848052389584 1.1101011107645142 0.9884328733994366 1.0 13.830163034742853 -10.503768882906211 0.9171221256306952 1.0027880202156356 1.108590262685046 0.40025073699909663 0.05351565918175547 0.499838636276802 0.781209037808262 0.03276708508451661 0.010379322400251906 3.1349535986286015e-11 10.503768882906211 0.10580224246941028 TIELDGK ddPTM_A549_MK2206_60min_R1 1 TIELDGK 7 0 P62820;P62820-3;Q9H0U4;E9PLD0;P61006;H0YMN7;H0YNE9;Q92930;P61006-2 P62820;Q9H0U4;P61006;P61006-2 RAB1A;RAB1B;RAB8A;RAB8B Ras-related protein Rab-1A;Ras-related protein Rab-1B;Ras-related protein Rab-8A;Ras-related protein Rab-8B 0 89.29799999999999 0.035107 3303300.0 2037.9 2045.6 1794.3 1865.4 3055.8 2183.1 1972.8 2267.6 3248.3 3290.0 3262.3 False True 2381.8476981285953 2149.7123025359633 2048.758720686894 2322.4230837409877 2606.2958679937838 2414.114192975503 2331.2322236631762 2589.03924423375 2512.565236469202 2546.7867149957633 2452.1808751003873 0.9713181120993317 0.8766532372731104 0.8354843402826155 0.947084738863691 1.0628481342703104 0.9844763971078089 0.9506771084199652 1.055810878603219 1.0246247583047243 1.0385802861673092 1.0 11.259849682119103 -6.53299681762626 7.335854988666219 1.0113143947312422 0.8922902123789341 0.6187191324497361 0.042431393618765446 0.06385335463033474 19.977995308421875 0.005668810876690192 0.012149199094150031 2.930914721995389e-07 6.53299681762626 -0.11902418235230805 TIELDGK ddPTM_A549_PD325901_60min_R1 1 TIELDGK 7 0 P62820;P62820-3;Q9H0U4;E9PLD0;P61006;H0YMN7;H0YNE9;Q92930;P61006-2 P62820;Q9H0U4;P61006;P61006-2 RAB1A;RAB1B;RAB8A;RAB8B Ras-related protein Rab-1A;Ras-related protein Rab-1B;Ras-related protein Rab-8A;Ras-related protein Rab-8B 0 73.931 0.052115999999999996 4407300.0 3124.2 3567.4 3173.3 3291.9 4482.2 3525.5 3913.6 3684.1 3871.6 3571.3 4141.1 False True 3441.366484085519 3868.0373177913903 3388.6592206030705 3495.233186552662 4167.385734750561 3496.7894968757987 4062.534189604091 3610.6177353794615 3708.8901158516687 3345.8075085181276 3631.7709525957544 0.9475725559250517 1.065055414639177 0.933059728940526 0.9624046318379457 1.1474803309861774 0.9628331584007301 1.118609692800273 0.9941755090030736 1.0212345889271444 0.9212606059660127 1.0 11.826457502716512 -5.227357507907131 22.411738685175767 1.0164318888578048 0.9475720034846011 0.06575021492930333 0.06912894706457935 6608.539533378931 4345375.434978463 0.007693516091037862 1.4459096061639383 5.924374338138583e-06 5.227357507907131 -0.06885988537320364 TIETS(ph)PSLSR ddPTM_A549_MK2206_60min_R1 2 TIETSPSLSR 10 0 Q9NVI1-1;Q9NVI1;H3BP78;F8W7R3;Q9NVI1-2 Q9NVI1-1 FANCI Fanconi anemia group I protein 1 T(0.001)IET(0.091)S(0.908)PS(0.001)LSR;TIET(0.014)S(0.985)PS(0.001)LSR 212.28 2.5128000000000003e-26 84516000.0 8976.0 10895.2 9196.5 8476.1 13489.1 9894.1 9510.0 10269.7 14646.9 14464.800000000001 14629.2 True False 10490.92935786951 11449.71914283821 10500.701986734117 10552.744880506583 11504.871258902718 10941.087094827959 11237.843900566106 11725.461424637215 11329.400536293064 11197.191633760101 10996.365894619925 0.9540360386700388 1.0412275521352097 0.9549247530833512 0.95965748881361 1.0462430378504943 0.9949729937761519 1.0219598009251698 1.0663033166597344 1.0302858821600398 1.0182629189556553 1.0 13.42473919674861 -6.756126781863044 24.999990706768283 1.0195542200007188 0.980406415955624 0.3705279524281886 0.029358973667313364 134.32847297629675 632114.9377047797 0.004235955183677309 0.008612149823799374 1.753368573199719e-07 6.756126781863044 -0.03914780404509477 TIETS(ph)PSLSR ddPTM_A549_PD325901_60min_R1 2 TIETSPSLSR 10 0 Q9NVI1-1;Q9NVI1;H3BP78;F8W7R3;Q9NVI1-2 Q9NVI1-1 FANCI Fanconi anemia group I protein 1 TIET(0.032)S(0.957)PS(0.011)LSR;TIET(0.029)S(0.969)PS(0.002)LSR 173.07 1.4206e-10 126189000.0 17890.7 17578.3 17447.6 17488.0 21878.7 20336.1 18057.4 19270.5 19402.2 18366.0 20355.4 True False 19706.950693562765 19059.685032049212 18631.699056942027 18568.194041870345 20342.01558941749 20170.48954401247 18744.584238388437 18886.134760085202 18586.793006967997 17206.367625638835 17851.814843512024 1.1039186136710892 1.0676609184626498 1.0436865506541728 1.0401292084103526 1.1394928620834588 1.1298845367166204 1.0500100075371819 1.0579392025763188 1.041171061312183 0.963844168028229 1.0 14.123783127901403 -9.114831275955272 0.7649590296278915 1.0082486610830246 1.082597331393143 0.5304456980187624 0.03401878759275429 0.3723917686658678 0.46780471607809737 0.009931325769892384 0.008226071429005716 7.676596683463636e-10 9.114831275955272 0.07434867031011838 TIFQGIAAK ddPTM_A549_MK2206_60min_R1 2 TIFQGIAAK 9 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 161.92 1.8517e-05 16103700.0 4426.299999999999 5388.2 4906.5 4623.3 6309.5 4866.4 5101.6 5052.200000000001 7355.2 6818.799999999999 7021.8 False True 5173.351227354924 5662.436365137017 5602.315478487567 5756.008707547827 5381.380908144112 5381.35921794512 6028.4946838199885 5768.364821713599 5689.258943840858 5278.428344137725 5278.093268178856 0.980155325890997 1.0728185496977345 1.0614279047063107 1.0905469863994786 1.0195691198918306 1.019565010415569 1.1421728221752416 1.0928880049336274 1.0779004187252397 1.000063484281509 1.0 12.365801129140257 -10.761894282335662 1.0694479046465368 1.000860132803937 1.0642590877923752 0.24427601021053913 0.041549889145296295 0.5773257912638124 1.1968296640101797 0.02652276337143942 0.007125654773671894 1.7302374891451e-11 10.761894282335662 0.06339895498843817 TIFQGIAAK ddPTM_A549_PD325901_60min_R1 2 TIFQGIAAK 9 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 147.51 7.7803e-05 29207000.0 5830.5 6333.4 6304.9 7204.4 7824.6 7415.6 7472.9 7844.5 8854.900000000001 6713.7 8496.5 False True 6422.4080678127575 6867.137845069235 6732.788428443668 7649.399425620465 7275.02708940459 7355.209812234341 7757.285298827785 7688.035293608796 8482.759346744228 6289.795836232793 7451.484363751131 0.8618964697900366 0.9215798503819537 0.9035499639771549 1.0265604881132304 0.9763191780680713 0.9870798156693273 1.041038928641422 1.0317454775867747 1.1383985971989539 0.8440997161358148 1.0 12.86331212915133 -6.298606710049734 0.5971694980654432 1.06247083201191 0.8463651273342433 0.13274306105020983 0.07720005560126252 0.7633652220989745 0.3548971943563798 0.010533604056642273 0.09015226654909475 5.027977087644915e-07 6.298606710049734 -0.21610570467766677 TIGDLSTLTAS(ph)EIK ddPTM_A549_PD325901_60min_R1 2 TIGDLSTLTASEIK 14 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 TIGDLSTLT(0.017)AS(0.983)EIK;TIGDLSTLTAS(1)EIK 192.65 7.993099999999999e-27 7510900.0 3292.8 2765.2 3337.8999999999996 3515.7 3641.5 3957.6000000000004 3784.2 4340.3 3893.7 3631.4 3954.4 True False 3627.082631968757 2998.2331084702446 3564.429966423275 3732.856804265983 3385.73360249301 3925.3706177380964 3928.209801793694 4253.729311600518 3730.0613297064883 3402.112784261398 3468.0338690069443 1.0458613638070828 0.8645339756525432 1.0277956043848941 1.0763611156239572 0.9762688977032682 1.1318720537357694 1.1326907262640198 1.2265535667385374 1.0755550466335482 0.9809917990321061 1.0 11.759902272728686 -5.985728616245555 24.34775655706864 1.0614271043295511 0.9529393712593192 0.23467910663129676 0.08072142052927046 199.98301106808927 341175.18160333525 0.011350255914369068 0.03526466481586114 1.033406963711754e-06 5.985728616245555 -0.10848773307023196 TIGGGDDS(ph)FNTFFSETGAGK ddPTM_A549_MK2206_60min_R1 2 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8W0F6;F8VXZ7;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 1 TIGGGDDS(0.815)FNT(0.185)FFSETGAGK;T(0.25)IGGGDDS(0.739)FNT(0.011)FFSETGAGK 316.66 2.2003999999999992e-183 26228000.0 7421.240000000001 8834.81 9318.02 7025.83 10966.800000000001 8653.02 8911.5 8528.2 12592.1 12208.6 12302.9 True False 8673.763880101997 9284.464092475442 10639.455350016651 8747.158665401492 9353.598247632115 9568.676832990195 10530.604197675599 9737.098466517142 9740.009455451724 9450.668780759052 9247.750387233717 0.9379323096864624 1.0039700147283828 1.1504911902362922 0.9458688112383224 1.011445795568241 1.0347031907564794 1.138720635476151 1.0529153641472588 1.053230142208159 1.021942460060931 1.0 13.174886742193577 -7.292397680891164 7.492943956928745 1.0381234913870887 1.0138564201711115 0.07733770457292422 0.06138630726841314 0.810037006491641 166.90992783511237 0.009466785457683504 0.015301451451481912 5.1003774752591605e-08 7.292397680891164 -0.024267071215977154 TIGGGDDS(ph)FNTFFSETGAGK ddPTM_A549_PD325901_60min_R1 4 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8W0F6;F8VXZ7;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 1 TIGGGDDS(1)FNTFFSETGAGK;T(0.007)IGGGDDS(0.991)FNT(0.002)FFSETGAGK;TIGGGDDS(0.998)FNT(0.002)FFSETGAGK;TIGGGDDS(0.998)FNT(0.002)FFSETGAGK 314.72 7.401299999999997e-164 82862600.0 19461.4 18981.3 20184.6 20305.9 22314.5 22343.1 20999.3 22637.9 22233.300000000003 22538.1 23223.9 True False 21437.10700127455 20580.92076587814 21554.448335860056 21560.14932495511 20747.20650084587 22161.145201431184 21798.439852757874 22186.36932541102 21298.91171938343 21115.04051962379 20367.50752843171 1.0525149909162792 1.0104781224285062 1.058276193381613 1.0585560994568701 1.0186423877287942 1.0880636803740307 1.070255642342524 1.0893021296022745 1.0457299053235425 1.036702232226922 1.0 14.313981821002752 -10.16005461076233 0.9336291954427992 1.0039022778751154 1.0543063670458868 0.19592318193741387 0.025290766867124836 0.3791766490756757 0.656385491522431 0.01038934394097605 0.004643248530348648 6.917439814613917e-11 10.16005461076233 0.05040408917077133 TIGGGDDSFNT(ph)FFSETGAGK ddPTM_A549_MK2206_60min_R1 1 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8W0F6;F8VXZ7;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 1 TIGGGDDS(0.288)FNT(0.712)FFSETGAGK 271.31 1.8490999999999995e-111 22817000.0 5140.8 6350.1 5203.4 5034.0 7179.2 5812.8 6096.3 5553.9 8748.9 8059.1 9344.7 True False 6008.441359507079 6673.292966529934 5941.320362939409 6267.33022598485 6123.149190228736 6427.906637775638 7203.91879821463 6341.182333105408 6767.28811912243 6238.543712711968 7024.153089400294 0.8553972675473202 0.950049476655083 0.8458415252801196 0.8922542185822347 0.8717277531249702 0.9151148267932238 1.025592510090022 0.9027682415798263 0.9634311828047308 0.8881560002053713 1.0 12.7781085730023 -7.574212988840039 6.403901125676935 0.9778628038372588 0.8859266908585897 0.31552456840279974 0.046291794193586165 0.10474381228408067 9.584242175261872 0.005608799021394153 0.008370028079607654 2.6655510912122966e-08 7.574212988840039 -0.0919361129786691 TIGGGDDSFNTFFSETGAGK ddPTM_A549_MK2206_60min_R1 2 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8W0F6;F8VXZ7;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 0 ; 267.34 1.0059e-110 19906300.0 4009.8 4256.4 4498.5 4363.7 6849.1 5188.700000000001 3912.0 4210.4 7260.8 7159.0 5673.0 False True 4686.556209802267 4473.032579445678 5136.454943437547 5432.806695893937 5841.606462947906 5737.7647900196935 4622.759762251799 4807.2370938092145 5616.240393115037 5541.7769278585665 4264.237533165095 1.0990373245750478 1.048964215679047 1.2045424072858943 1.2740394158721926 1.3699064410729536 1.3455546848397268 1.084076514569908 1.1273380191466686 1.3170561793133575 1.2995938628552965 1.0 12.058072088231663 -10.984541158691416 1.2251493066253583 0.9986212887361248 1.2187937175062225 0.0 0.13661871259359956 0.4536477498333064 1.198809678067797 0.08447131529256088 0.018881591193964486 1.0362363942146325e-11 10.984541158691416 0.22017242877009768 TIGGGDDSFNTFFSETGAGK ddPTM_A549_PD325901_60min_R1 2 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VS66;F8VRZ4;F8VWV9;F8VX09;F8VRK0;F8W0F6;F8VXZ7;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain 0 ; 379.35 7.549899999999995e-284 31745000.0 7932.2 6760.8 7675.4 7675.4 9926.7 9174.3 8652.099999999999 9241.8 8786.2 10419.400000000001 9360.6 False True 8737.47110462299 7330.556343029664 8196.298799929664 8149.492025901852 9229.4828372559 9099.587542529469 8981.360400110787 9057.465048948152 8416.946568833539 9761.517305814068 8209.305541732347 1.0643374229654008 0.8929569384114742 0.9984156099761956 0.9927139371867169 1.1242708400043633 1.10844790661906 1.0940463056775835 1.1033168400060336 1.0252933729955158 1.1890795459117691 1.0 13.00304446843439 -6.544781795524482 24.9982264620899 1.0401541178459923 0.9792679896120208 0.13640654518340822 0.0724246174684139 321.7263961902542 367189.51867232495 0.009090636862632052 0.01892474469503518 2.8524510769945035e-07 6.544781795524482 -0.06088612823397155 TIGISVDPR ddPTM_A549_MK2206_60min_R1 2 TIGISVDPR 9 0 P26373;J3QSB4 P26373 RPL13 60S ribosomal protein L13 0 ; 121.29 3.8996e-08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TIGISVDPR ddPTM_A549_PD325901_60min_R1 2 TIGISVDPR 9 0 P26373;J3QSB4 P26373 RPL13 60S ribosomal protein L13 0 ; 121.29 0.00035554 8893900.0 2892.1 2764.5 2649.7 2960.2 3487.2 2726.6 2948.7 2772.7 2720.08 3166.0 3259.8 False True 3185.703862948508 2997.474117013595 2829.5245759404893 3143.04483089802 3242.2711021869086 2704.39547360135 3060.914392090553 2717.396323358928 2605.7644969330013 2966.098219687058 2858.8652655747605 1.1143245893080023 1.048483869844411 0.9897369456379846 1.0994029235113767 1.1341111948257787 0.9459681455319109 1.0706745886029616 0.9505157014850117 0.9114681018061638 1.0375089219501008 1.0 11.481226913981393 -7.856827617076611 1.3659844362759377 0.9576446126898409 1.0663160973308294 0.27491419100732783 0.06004641171924243 0.305941455934878 1.15653168138554 0.010093287124728578 0.015506350339301672 1.3905044495458648e-08 7.856827617076611 0.10867148464098852 TIGYTS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TIGYTSPR 8 0 Q8IZD2-6;Q8IZD2-5;Q8IZD2-7;Q8IZD2;Q8IZD2-8;Q8IZD2-2 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 TIGY(0.001)T(0.227)S(0.772)PR;TIGYT(0.023)S(0.977)PR 71.692 0.0060065 29207000.0 6158.6 6671.4 6355.4 5253.9 8293.4 5808.6 5995.1 5594.7 8575.2 8727.1 9054.4 True False 7198.021116686181 7010.945764146669 7256.691285433588 6541.105735856533 7073.451846200545 6423.262196563379 7084.332068168654 6387.76585805017 6632.930891780528 6755.642048765815 6805.942591272703 1.0576082622142953 1.0301212021883408 1.0662286947202408 0.9610874097357548 1.0393052470455557 0.9437726090725425 1.040903882623537 0.9385571171642318 0.9745793184159343 0.9926093201885969 1.0 12.73257926675615 -6.256393542439316 24.976493125673162 0.9870686674613237 1.049199569917656 0.4418974974535371 0.03248554989240563 280.8001306740571 1389930.8592160046 0.004050039734658339 0.01036385524464968 5.541233582166196e-07 6.256393542439316 0.06213090245633224 TIGYTS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TIGYTSPR 8 0 Q8IZD2-6;Q8IZD2-5;Q8IZD2-7;Q8IZD2;Q8IZD2-8;Q8IZD2-2 Q8IZD2-6 KMT2E Histone-lysine N-methyltransferase 2E 1 TIGYT(0.002)S(0.998)PR;TIGYT(0.002)S(0.998)PR 96.66799999999999 0.0024791 56477000.0 8572.5 8839.7 9163.599999999999 9128.0 10563.599999999999 9226.5 8497.900000000001 9145.0 9519.1 10216.5 10407.5 True False 9442.773889259048 9584.65254192985 9785.497001203255 9691.815828807887 9821.64917844162 9151.362443036323 8821.292234729313 8962.595800886287 9119.045330561945 9571.428446441203 9127.443478578234 1.0345475062563665 1.0500916893569014 1.0720961487375351 1.0618324672789499 1.0760569705517935 1.0026205546508424 0.9664581605388797 0.9819393373315498 0.9990799013945143 1.0486428613778858 1.0 13.155995114503856 -7.3237783184255845 6.347452117424694 0.9953559668529305 1.0592680065091915 0.6503511046723196 0.021475721257470513 0.07307410272747569 5.955846944895488 0.0022752478261738457 0.0036614525088753532 4.7448411945809924e-08 7.3237783184255845 0.06391203965626102 TIHT(ph)FPCLK ddPTM_A549_MK2206_60min_R1 3 TIHTFPCLK 9 0 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 T(0.097)IHT(0.903)FPCLK;T(0.084)IHT(0.916)FPCLK;T(0.001)IHT(0.999)FPCLK 91.855 0.00090949 7586400.0 2710.29 2875.51 2178.65 2397.3599999999997 3318.83 2737.52 2786.08 2613.83 4416.3 3193.13 3630.29 True False 3167.720691771405 3021.8611767037496 2487.615330114529 2984.7133076215805 2830.6345034275173 3027.202549381292 3292.2746723963423 2984.348407018655 3416.0151013819336 2471.7997152749012 2728.7888020930577 1.1608522760507058 1.1074001675710108 0.9116188574969445 1.093786849803921 1.0373226763670171 1.1093575827705473 1.2064966954830199 1.0936531272517593 1.251842978379915 0.9058230205939578 1.0 11.4140450244688 -7.399233205811665 5.538720096220999 1.126856746575144 1.0584486742931747 0.0 0.10626223973039489 0.48387391338603886 20.05690459746434 0.016044440947392984 0.025768099752941004 3.988106929939914e-08 7.399233205811665 -0.06840807228196932 TIHT(ph)FPCLK ddPTM_A549_PD325901_60min_R1 3 TIHTFPCLK 9 0 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 T(0.34)IHT(0.66)FPCLK;T(0.003)IHT(0.997)FPCLK;TIHT(1)FPCLK 88.596 0.00099192 12297900.0 3147.55 4081.39 4408.96 4313.26 3872.7 3906.67 4158.04 4527.58 4422.25 4220.28 4427.629999999999 True False 3467.0869588961577 4425.343058939451 4708.178538830276 4579.680274075802 3600.694912089711 3874.855374772309 4316.2764875667945 4437.2738650822 4236.398211288627 3953.8108005625104 3883.059579059075 0.8928750353442391 1.1396536593991122 1.2124919648982413 1.1793999501767956 0.9272829424271195 0.9978871804257111 1.1115658669890134 1.1427261865905802 1.0909949036412083 1.0182204831172277 1.0 11.922978127822372 -10.654588767971024 0.9672875878028185 1.0008614197132908 1.0819569439544303 0.06641619823040734 0.09609807622792041 1.1503573477371896 1.9484307574410882 0.06245514910966488 0.01745143491030805 2.2151912742292227e-11 10.654588767971024 0.08109552424113953 TILET(ph)SFHQHR ddPTM_A549_MK2206_60min_R1 1 TILETSFHQHR 11 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 T(0.001)ILET(0.701)S(0.299)FHQHR 70.977 0.0024527 6722600.0 1842.4 1902.1 1568.8 1268.4 1922.8 1514.4 1516.0 1449.9 1846.3 1964.5 2309.1 True False 2153.352077644695 1998.9087654740222 1791.2794298688054 1579.1580569406394 1639.9586671177585 1674.6528028226394 1791.4375765781524 1655.4277651325253 1428.1159979352537 1520.7180855954953 1735.6867420820595 1.2406340530443996 1.151652955000516 1.03202921727688 0.9098174334421345 0.94484714744697 0.9648358555840518 1.0321203320532462 0.9537595264147385 0.8227959362195414 0.8761477798530071 1.0 10.761290877360894 -5.761642861154593 1.6812066419749103 0.9301796986506298 1.2465533884208766 0.7694205857797631 0.05490038709997042 0.20005476563391525 0.9634414792012173 0.01043344192103102 0.07496368327931237 1.7312394459177683e-06 5.761642861154593 0.3163736897702468 TILET(ph)SFHQHR ddPTM_A549_PD325901_60min_R1 1 TILETSFHQHR 11 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 TILET(0.5)S(0.5)FHQHR 86.772 0.00014986 9064500.0 184.69 304.46 240.95 200.9 322.49 375.14 265.18 348.82 429.7 494.76 367.67 True False 203.43959283840806 330.11791270246306 257.30231595005506 213.30913672299576 299.8394149301031 372.0849842172705 275.27157001206405 341.8625114560038 411.6412033220018 463.5207691637302 322.4489208521602 0.6309203712041053 1.0237835866531524 0.7979630239420952 0.6615284559156456 0.9298818992406448 1.1539346549336662 0.8536904675772615 1.0602067160049344 1.2766090276690223 1.437501381424223 1.0 8.332926831024661 -7.3386081827964675 1.0636214259035832 1.1207340052810977 0.7942176742931946 0.47167164625668967 0.17130454804508233 0.35259106082897473 0.7893696945598696 0.02693868732441654 0.05713161829267805 4.585554053753458e-08 7.3386081827964675 -0.3265163309879031 TILETS(ph)FHQHR ddPTM_A549_MK2206_60min_R1 3 TILETSFHQHR 11 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 TILET(0.129)S(0.871)FHQHR;T(0.011)ILET(0.223)S(0.767)FHQHR;TILET(0.158)S(0.842)FHQHR 93.01100000000001 0.00035094 26083700.0 1251.95 1344.98 1293.46 1273.95 1635.0800000000002 1256.75 1069.5400000000002 1336.74 2180.6 1999.0900000000001 2140.3999999999996 True False 1463.2485527612218 1413.4337371259387 1476.8920776122554 1586.0678071897894 1394.561897977378 1389.7384508368661 1263.8615736499971 1526.2269885945595 1686.6975817026562 1547.494180571697 1608.8796079651977 0.9094829380128945 0.8785205121180908 0.9179630783437729 0.98582131275549 0.8667907101769571 0.8637926939695093 0.7855538521297091 0.9486272192391253 1.0483678041241864 0.9618458540405413 1.0 10.651840658274745 -8.550860383891091 5.736675515674919 1.0221260567341515 0.8882538557487731 0.505524422311185 0.049941345258803685 0.08734416013132128 8.449930378185202 0.008402670398223787 0.009633195399423075 2.8128049398907287e-09 8.550860383891091 -0.13387220098537833 TILETS(ph)FHQHR ddPTM_A549_PD325901_60min_R1 3 TILETSFHQHR 11 0 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 TILET(0.014)S(0.986)FHQHR;TILET(0.176)S(0.824)FHQHR;TILET(0.177)S(0.823)FHQHR 104.17 6.1056e-05 41288000.0 2577.5 2904.14 2498.2 2877.01 2896.38 3109.77 2555.34 2912.3500000000004 3819.38 3956.41 4281.07 True False 2839.1659025447875 3148.882069880216 2667.742874896981 3054.716373536218 2692.9482607685586 3084.4450641609574 2652.584862035701 2854.2608945556244 3658.8647408517254 3706.601597394844 3754.52552993869 0.7561983211740606 0.8386897478179183 0.7105406138869814 0.8136091629096207 0.7172539484136984 0.8215272581223666 0.7065033493270765 0.7602188004304857 0.9745212042575918 0.9872356887277235 1.0 11.8744148864483 -8.775455498195674 6.525683392376973 0.9884526394553381 0.7657963059091207 0.8428100915015291 0.04265134980206611 0.03561935668547542 6.051369532687291 0.006710173145836445 0.007273623405045171 1.677044172304496e-09 8.775455498195674 -0.2226563335462174 TILKVT(ph)PEK ddPTM_A549_MK2206_60min_R1 2 TILKVTPEK 9 1 A0A075B6G6;Q7Z7B0-2;Q7Z7B0;Q7Z7B0-3 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 T(0.001)ILKVT(0.999)PEK;T(0.003)ILKVT(0.997)PEK 63.727 0.002612 18076200.0 5916.1 5442.700000000001 6285.200000000001 6155.8 7494.1 5545.0 6066.9 6094.7 8748.5 7329.1 7467.0 True False 6914.593045241953 5719.7101823487 7176.535869844093 7663.971276344363 6391.727817374241 6131.768219526897 7169.177198774395 6958.64238923595 6766.9787184837605 5673.451219718983 5612.737821283933 1.231946558954043 1.019058855850904 1.278615908733545 1.3654604081598103 1.13878966395621 1.0924736580915575 1.2773048424938582 1.2397946618579339 1.2056466797402967 1.010817073657854 1.0 12.454488955262937 -10.564876371536206 0.7707233626292521 0.9938544326303081 1.205034305676967 0.4164959310785784 0.09082003692429048 0.5662556492917334 0.5774476740930224 0.07129803660331424 0.017826477544100952 2.7234764763295754e-11 10.564876371536206 0.21117987304665886 TILKVT(ph)PEK ddPTM_A549_PD325901_60min_R1 2 TILKVTPEK 9 1 A0A075B6G6;Q7Z7B0-2;Q7Z7B0;Q7Z7B0-3 A0A075B6G6 FILIP1 Filamin-A-interacting protein 1 1 TILKVT(1)PEK;T(0.096)ILKVT(0.904)PEK 72.958 0.00095626 25829000.0 5557.0 5950.8 5774.9 6091.5 7437.1 6757.1 6369.4 6452.5 6987.8 6797.8 6517.7 True False 6121.1425491528125 6452.294800334419 6166.819441294759 6467.758120199743 6914.743752602159 6702.072417909368 6611.791002469418 6323.799825611677 6694.127066729078 6368.585747880197 5716.064219104429 1.0708666513393108 1.1288002641344257 1.0788576203681897 1.131505503136752 1.2097036505453282 1.1724977468779074 1.1567034149776099 1.1063206400788943 1.171107743043847 1.1141557378930222 1.0 12.480806409644284 -10.826981416465458 0.960325046749058 0.9960193375991614 1.1392637603099496 0.1435003174379682 0.05119576590800174 0.3234009150799438 0.5047674684005489 0.033190705753683346 0.007320065289887959 1.4894248090875732e-11 10.826981416465458 0.1432444227107882 TINEVENQILTR ddPTM_A549_PD325901_60min_R1 2 TINEVENQILTR 12 0 P12814-4;P12814-3;P12814;P12814-2;H9KV75;H7C5W8;H0YJ11;H0YJW3;O43707;O43707-2;F5GXS2;O43707-3;H7C144 P12814-4;O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 0 ; 81.92 0.0019209 3518000.0 3370.6000000000004 3724.1 3024.7 3334.7 3679.8 3727.0 3424.7 3251.5 4241.0 3660.1000000000004 4451.8 False True 3712.7808306954257 4037.9429767300876 3229.9743309986766 3540.676845346808 3421.3435426208353 3696.6485476829116 3555.0288325677484 3186.646281747595 4062.7655184747723 3429.0006613634264 3904.256822285328 0.9509571218530078 1.0342411271926797 0.8272955591860975 0.9068760090618985 0.8763110877061047 0.9468251490482396 0.9105519934743531 0.8161979159665821 1.040598941976533 0.8782723108251589 1.0 11.930832241264442 -8.78948028225483 24.998862744862592 1.0191717413407204 0.9103289289120325 0.04426594221698166 0.07131274976303552 144.63690301827944 128945.16442117716 0.009923591104336025 0.010565483989714082 1.6237520700530841e-09 8.78948028225483 -0.10884281242868787 TIPIDGNFFT(ph)YTR ddPTM_A549_PD325901_60min_R1 1 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 1 TIPIDGNFFT(0.363)Y(0.273)T(0.363)R 77.37899999999999 0.00097538 1052200.0 2998.1 3116.9 3111.1 3589.8 3535.6 3579.7 3496.1 4037.1 3508.7 3666.8 4021.7 True False 3302.4649049154323 3379.572101761501 3322.2379545640847 3811.533792972673 3287.271653157841 3550.548110045752 3629.1459986393265 3956.576873456317 3361.2415408329266 3435.2776222199964 3527.056395656791 0.936323249319767 0.9581848778837497 0.9419293546468609 1.0806557552258553 0.9320156199389892 1.0066604306123055 1.0289447038919617 1.1217787383066617 0.9529877506273933 0.9739786487253759 1.0 11.784248928496542 TIPIDGNFFTYTR ddPTM_A549_MK2206_60min_R1 1 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 250.51 3.3943999999999994e-68 42061000.0 12387.0 12978.0 11964.0 10798.0 17045.0 14216.0 12715.0 14223.0 21366.0 16956.0 18318.0 False True 14477.622766926195 13638.524766480123 13660.675101319728 13443.510484740633 14537.70307937497 15720.327684182927 15025.15091437414 16239.153806110698 16526.63511449096 13125.627823546567 13769.135048919119 1.0514547729752053 0.9905142710871117 0.9921229658061996 0.976351124233904 1.055818177955643 1.1417077128179505 1.0912196634714262 1.1793880841763895 1.2002667600960386 0.9532645134871368 1.0 13.74915031448868 -6.989861327590198 4.729334756046387 1.1064079655048857 1.0016856211562677 0.26353642592022875 0.06992173803953636 0.1959838598168143 11.681364078538063 0.01142029058129978 0.021377406846111256 1.0236197870446526e-07 6.989861327590198 -0.10472234434861805 TIPIDGNFFTYTR ddPTM_A549_PD325901_60min_R1 2 TIPIDGNFFTYTR 13 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 276.35 9.712999999999997e-98 112547000.0 36664.0 34083.0 40013.0 36168.0 42227.0 40710.0 39257.0 41867.0 43762.0 39331.0 46120.0 False True 40386.10228938974 36955.2940242989 42728.52279771548 38402.01521651224 39261.12119524159 40378.47125735747 40750.946617254674 41031.92984097386 41922.83532645439 36847.633947729555 40447.53237876801 0.998481240121078 0.9136600393377203 1.0563938090854912 0.9494278873899977 0.9706678970569488 0.998292575162217 1.0075014276679566 1.0144482846749043 1.0364744858566652 0.9109983175901198 1.0 15.30376406901541 -7.618072563746566 2.1555388371082964 1.0171639377945587 0.9771694848956011 0.0 0.04632727884141369 0.342147056963596 3.2297432797291465 0.005101936050789956 0.008097852176427013 2.409502805200183e-08 7.618072563746566 -0.039994452898957644 TIPSLTSTS(ph)TPLR ddPTM_A549_MK2206_60min_R1 1 TIPSLTSTSTPLR 13 0 Q86T82;Q86T82-2;Q86W68 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 1 TIPSLT(0.001)S(0.006)T(0.05)S(0.643)T(0.3)PLR 122.7 6.998e-06 3278300.0 1310.7 1615.6 1806.9 1929.1 2757.7 2481.0 1933.9 1746.0 2990.8 2532.8 2937.8 True False 1531.914116461626 1697.827139214462 2063.1455901516742 2401.7295866005907 2352.0459831030994 2743.5377732454886 2285.2645971929346 1993.5008469007453 2313.388575326198 1960.6387208940039 2208.2631808447754 0.6937189958832666 0.7688518080371901 0.9342842864238735 1.087610212149534 1.0651112618756426 1.2423961949118505 1.034869673604168 0.9027460423164451 1.047605464508631 0.887864606855401 1.0 11.10869640744529 -5.809635084173958 2.3942207781893114 1.0373809373699279 0.7048703260400372 0.6270441137826692 0.08974363890705706 0.12714892781289108 1.4115611898654954 0.011388345977481985 0.054847713227734365 1.550118558576388e-06 5.809635084173958 -0.3325106113298907 TIPSLTSTST(ph)PLR ddPTM_A549_MK2206_60min_R1 1 TIPSLTSTSTPLR 13 0 Q86T82;Q86T82-2;Q86W68 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 1 TIPSLTS(0.004)T(0.033)S(0.441)T(0.522)PLR 133.05 3.3685e-08 3973100.0 1564.4 1768.3 1404.9 1405.4 2212.9 1526.6 1420.6 1895.9 2045.7 2498.6 2238.0 True False 1828.4324740921402 1858.2989169800271 1604.1359453229763 1749.7230630908036 1887.3853414109055 1688.1437987249333 1678.7046314557542 2164.649630950242 1582.3522163116222 1934.1645246469361 1682.2428343422312 1.0869016272594618 1.1046555699591583 0.9535697894354265 1.0401132508167037 1.1219458349774374 1.003507795820102 0.9978967347553837 1.2867640668516418 0.9406205715421181 1.1497534631515955 1.0 10.716170260537139 TIPSLTSTST(ph)PLR ddPTM_A549_PD325901_60min_R1 2 TIPSLTSTSTPLR 13 0 Q86T82;Q86T82-2;Q86W68 Q86T82 USP37 Ubiquitin carboxyl-terminal hydrolase 37 1 TIPSLT(0.001)S(0.005)T(0.034)S(0.341)T(0.618)PLR;TIPSLTST(0.001)S(0.037)T(0.961)PLR 122.33 8.0386e-06 11559800.0 4046.8999999999996 3970.8 4544.3 3773.2 5011.0 3878.6 3976.0 4507.9 4678.9 4627.700000000001 5493.3 True False 4457.73830882968 4305.433251523813 4852.703525095806 4006.2619944410526 4659.044647011522 3847.0139675457312 4127.308855750685 4417.98639812086 4482.26210431304 4335.506232231777 4817.658924897794 0.925291387024508 0.8936774725319834 1.0072741970206525 0.8315785855525346 0.9670764825076036 0.7985235209707887 0.8567042457947032 0.9170400949906571 0.9303817838055297 0.899919712004883 1.0 12.234116543581658 -9.764039249743597 0.8158446858064843 0.9915481749786456 0.8993804892324009 0.01720095828223278 0.06218159975150787 0.4839450410274359 0.6740720574421536 0.020596231563416414 0.011405021789786994 1.7217129666394777e-10 9.764039249743597 -0.09216768574624468 TIPVKS(ph)PNLSEIK ddPTM_A549_MK2206_60min_R1 2 TIPVKSPNLSEIK 13 1 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 T(0.011)IPVKS(0.987)PNLS(0.003)EIK;T(0.001)IPVKS(0.997)PNLS(0.002)EIK 87.287 5.4243e-05 14172800.0 4755.1 5465.5 5383.1 5476.4 6783.6 5904.0 5111.0 5060.5 7403.8 6754.8 8110.700000000001 True False 5557.644628966721 5743.670604962021 6146.504525068058 6818.118245844942 5785.741426180583 6528.757361241981 6039.602542144417 5777.841372131278 5726.8511214391165 5228.885988587659 6096.589346067711 0.9115989799364446 0.9421121021816367 1.0081873939947328 1.1183495982458809 0.9490128164712909 1.0708868501128452 0.990652674686044 0.947717001122599 0.9393532672711383 0.8576739701125321 1.0 12.573786656908027 -8.009720485154702 24.3513586112587 0.9688066524707459 1.0033185207528326 0.10695972801100528 0.06575776243152465 751.0815450824965 1881584.596038353 0.009261568528670504 0.012403784111028838 9.778663798381187e-09 8.009720485154702 0.03451186828208663 TIPVKS(ph)PNLSEIK ddPTM_A549_PD325901_60min_R1 1 TIPVKSPNLSEIK 13 1 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 T(0.006)IPVKS(0.799)PNLS(0.195)EIK 66.335 0.0013847000000000002 9899400.0 2621.2 2769.9 3461.4 2948.6 3530.7 3446.8 3581.6 3057.6 3338.4 3273.3 3624.2 True False 2887.3022943745464 3003.329193964894 3696.311419089109 3130.728325243532 3282.715812253759 3418.730403582899 3717.8997479267223 2996.613769359203 3198.098657598723 3066.623279375126 3178.446375696682 0.9084005054959218 0.9449047864797139 1.1629302439557176 0.9849869889836694 1.0328051583170794 1.075597949275941 1.169722344965407 0.9427919855034134 1.0061829836275697 0.9648183158990544 1.0 11.634106033257217 -3.85811027064727 10.52653662478929 1.0160507801612877 0.6022599824140957 0.0 0.08255962680879012 0.0 0.0 0.010105636044352021 0.0 0.00013864037657965026 3.85811027064727 -0.41379079774719196 TIPVKSPNLS(ph)EIK ddPTM_A549_PD325901_60min_R1 1 TIPVKSPNLSEIK 13 1 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 TIPVKS(0.25)PNLS(0.75)EIK 129.05 1.3579e-08 10323000.0 5252.5 4726.0 5708.4 5185.0 6171.3 5862.0 5457.9 6110.0 5951.7 5788.5 6238.3 True False 5785.729933313866 5124.276605898445 6095.806351397773 5505.265674010616 5737.849177829224 5814.261815539902 5665.603371177476 5988.131256797727 5701.570746594274 5423.013122128412 5471.0286478418975 1.0575214106393147 0.9366203205533877 1.1141974834663542 1.0062578773339494 1.0487697190349343 1.0627364961492929 1.0355645594018834 1.0945165237180408 1.0421387116741412 0.9912236749605715 1.0 12.417596394758604 -4.902278022705684 20.83091744011123 1.0304646999947207 3.994693692717722 0.018525195343415346 0.04720683947225983 2460.128423477998 575823.1438541834 0.005847081056784421 33975.96503767721 1.2523392071061191e-05 4.902278022705684 2.9642289927230014 TIPWLEDR ddPTM_A549_PD325901_60min_R1 1 TIPWLEDR 8 0 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 54.549 0.029183999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TIPWLEDRVPQK ddPTM_A549_PD325901_60min_R1 1 TIPWLEDRVPQK 12 1 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 72.958 0.0016539999999999999 2118800.0 1517.2 1580.7 1274.9 1072.6 1354.9 2136.5 1538.8 1528.0 1765.6 1852.4 2101.7 False True 1671.2250270963918 1713.9111364671317 1361.4223805964934 1138.852065948657 1259.7364981512508 2119.101052354318 1597.3598760636687 1497.5228413071882 1691.3979720393918 1735.439147867439 1843.2042237739956 0.9066955281138228 0.929854171534973 0.7386172205101371 0.6178653733859375 0.6834492249436779 1.149683266250019 0.8666212107484454 0.8124562769506798 0.9176400261150782 0.9415338384555643 1.0 10.848000212550401 -7.236934187125568 24.920775732408746 0.9517266873053308 0.7730989654638739 0.35878747598954475 0.11487776904810502 677.0606867993441 688543.3019846338 0.01778303364747722 0.03079218500422195 5.7951650955639005e-08 7.236934187125568 -0.17862772184145692 TIQAPTQVPVVVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TIQAPTQVPVVVSPR 15 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 TIQAPTQVPVVVS(1)PR;TIQAPTQVPVVVS(1)PR 167.29 2.6320999999999996e-21 14819900.0 7543.4 6993.7 7608.9 7890.3 9459.8 7366.1 7650.599999999999 8641.4 8737.599999999999 8187.9 9345.900000000001 True False 8309.200414842426 7583.083643392282 8125.285710032675 8377.665910828538 8795.376282538344 7306.112923822676 7941.747769568955 8469.040497952838 8370.38905782249 7670.914596644242 8196.413548541364 1.0137605143558346 0.9251709419593366 0.9913220778713212 1.0221136185007929 1.0730761973453098 0.8913792453923793 0.9689296083629492 1.0332617367092207 1.0212258090994062 0.9358867206022516 1.0 13.000777061761156 -8.25269036424628 24.687258553671484 1.012046244500339 0.9830891807347022 0.0 0.05141149204311173 1144.7641435267956 3230197.684505534 0.007381307560149315 0.009460316801138593 5.5886850511175915e-09 8.25269036424628 -0.028957063765636892 TIQEVLEEQS(ph)EDEDR ddPTM_A549_MK2206_60min_R1 2 TIQEVLEEQSEDEDR 15 0 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR 313.51 3.109499999999999e-143 17587600.0 4371.7 4082.6 4048.1 3395.1 7438.2 5168.9 4552.5 5362.4 7497.700000000001 5225.4 5663.7 True False 5109.536082196761 4290.386901805498 4622.181450823501 4226.899652411832 6344.050633323958 5715.869567161872 5379.6303214855125 6122.536621661252 5799.482921366604 4044.978510802087 4257.246979832038 1.2001972416451976 1.007784355037529 1.085720765724957 0.9928716075050447 1.4901767887505204 1.3426210868760498 1.2636406454618605 1.438144568700312 1.362261327294526 0.9501394985925092 1.0 12.055705073687747 TIQEVLEEQS(ph)EDEDR ddPTM_A549_PD325901_60min_R1 1 TIQEVLEEQSEDEDR 15 0 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDR 178.51 7.6642e-28 17502000.0 4160.5 3974.5 4018.8 4577.1 4185.1 4434.8 4196.7 4008.9 3348.4 4508.1 5134.7 True False 4582.870897201781 4309.445063508961 4291.539935007598 4859.817071651686 3891.1530138112003 4398.684459153253 4356.407715022357 3928.9393445787896 3207.6783923746584 4223.45779664284 4503.164451545098 1.0177000965686107 0.9569814982062959 0.9530053768156548 1.0792004431426474 0.8640930296196693 0.9767985394457454 0.9674103093276135 0.8724840913217629 0.7123165113976816 0.9378866444004089 1.0 12.136723449238666 -8.271914702701032 5.460480769868252 0.8607219698595131 0.9724288733930704 0.21853116357328084 0.08160646817394754 0.2299355410529542 24.309452382091433 0.018077979335719425 0.02249004796138279 5.346693604409345e-09 8.271914702701032 0.11170690353355728 TIQEVLEEQS(ph)EDEDREAK ddPTM_A549_MK2206_60min_R1 2 TIQEVLEEQSEDEDREAK 18 1 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK 329.85 5.911199999999998e-196 560940000.0 23166.2 25585.1 23674.4 21914.6 31516.1 25881.4 24530.9 25770.8 33316.7 35039.4 35785.7 True False 27076.088200788403 26887.27230720224 27031.785909284845 27283.67798378378 26880.123439125222 28620.152569317117 28987.846996887198 29423.88981976501 25770.52064583734 27123.975204079823 26899.1230549244 1.0065788444293393 0.9995594373951165 1.0049318654028077 1.0142961883208672 0.9992936715535156 1.0639808781453064 1.0776502615976702 1.0938605604236753 0.9580431523071363 1.0083590884615943 1.0 14.715271519434157 -8.79859878621913 24.999898735138764 0.9801870421250501 1.0313390255401043 0.24046269649843288 0.03362015687330119 156.77665046815554 105474.65949073271 0.00645004265199271 0.00686667736920208 1.5900149720361386e-09 8.79859878621913 0.051151983415054114 TIQEVLEEQS(ph)EDEDREAK ddPTM_A549_PD325901_60min_R1 2 TIQEVLEEQSEDEDREAK 18 1 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK 327.2 3.0215999999999997e-174 846470000.0 31630.2 32445.8 34333.9 33070.7 40755.0 33050.3 37702.1 35333.2 37064.8 35131.0 36234.9 True False 34841.274619077434 35180.12143454499 36664.00492051293 35113.402029990924 37892.5093971173 32781.149314592025 39136.87404688072 34628.4516076408 35507.095352314005 32912.82266450603 31778.237011956215 1.0963879023864282 1.1070507599684922 1.1537457193335963 1.1049512286279408 1.1924043924419299 1.0315597212727212 1.2315621546958662 1.0896907715368926 1.1173400002950085 1.0357032283484744 1.0 14.95575146884698 -10.480491884818493 0.6217360527798638 0.9905588713599542 1.128453912848417 0.3864985650440186 0.05158767446008507 0.5957416117389279 0.37735597790305725 0.04355648667193584 0.009872271369220652 3.30756292479182e-11 10.480491884818493 0.13789504148846277 TIQEVLEEQS(ph)EDEDREAKR ddPTM_A549_MK2206_60min_R1 4 TIQEVLEEQSEDEDREAKR 19 2 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR 266.94 1.4471999999999999e-111 760752000.0 10822.4 10929.400000000001 11240.4 9381.6 15124.400000000001 11681.9 10597.7 10199.5 17830.5 16763.3 16729.2 True False 12648.956537723585 11485.659776758193 12834.45774062808 11680.09242115603 12899.620795171533 12918.070904182367 12523.164911149266 11645.31035965873 13791.920219457596 12976.458887382516 12574.8779375684 1.0058909995407486 0.9133814128281845 1.020642729444249 0.928843403422698 1.0258247323922676 1.0272919521221475 0.9958875921757747 0.9260774074687026 1.0967836258873884 1.0319351767713276 1.0 13.61825677562642 -7.698997863476922 0.7091493701966476 1.039764322734788 0.9697329147457323 0.08891989628170693 0.05004521269518647 0.8132414503971659 0.8248606429977724 0.011731297251186821 0.023254137153204797 1.9998717080297875e-08 7.698997863476922 -0.0700314079890556 TIQEVLEEQS(ph)EDEDREAKR ddPTM_A549_PD325901_60min_R1 4 TIQEVLEEQSEDEDREAKR 19 2 P18858;P18858-2;M0R0Q7;P18858-3 P18858 LIG1 DNA ligase 1;DNA ligase 1 TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR 338.62 1.3443999999999994e-206 1252024000.0 29068.5 29375.8 29076.199999999997 30838.6 34372.6 34117.9 34969.0 37504.3 35170.899999999994 34740.4 35001.3 True False 32019.512720901334 31851.401760379067 31049.48578139445 32743.430282457837 31958.387155032608 33840.055134153685 36299.76443077102 36756.24731494582 33692.78938309933 32546.88521516626 30696.361991521535 1.0431044802555187 1.037627904217984 1.0115037667972007 1.0666876515041657 1.041113183505578 1.1024125641827018 1.1825428837722585 1.1974137953252586 1.0976150656682189 1.0602847732951497 1.0 14.905780062903993 -6.658040353607488 2.036355469066806 1.0739001848764536 1.0328434826440738 0.1317413174563291 0.05709355104542198 0.8469953482799665 7.099989562636287 0.010914957675770887 0.02668612570088653 2.1976556623747503e-07 6.658040353607488 -0.04105670223237978 TIQNSSVS(ph)PTSSSSSSSSTGETQTQSSSR ddPTM_A549_MK2206_60min_R1 1 TIQNSSVSPTSSSSSSSSTGETQTQSSSR 29 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 TIQNS(0.004)S(0.015)VS(0.497)PT(0.196)S(0.196)S(0.041)S(0.041)S(0.009)S(0.002)SSSTGETQTQSSSR 112.15 8.9973e-16 3680500.0 191.34 293.94 312.5 335.28 536.91 340.47 334.48 127.21 304.0 376.85 470.96 True False 223.6335141861354 308.9002904807495 356.817199027283 417.4236150512911 457.93125024037624 376.49830941430525 395.2506864207523 145.24240706428617 235.14448538824524 291.71932326630815 354.0076341652448 0.6317194676139302 0.8725808730343936 1.0079364527509787 1.1791373257686437 1.293563206116119 1.0635316108425001 1.1165032848875116 0.4102804376147704 0.6642356341911083 0.8240481139741141 1.0 8.46763666209877 TIRVT(ph)PVR ddPTM_A549_MK2206_60min_R1 2 TIRVTPVR 8 1 Q9BY78 Q9BY78 RNF26 RING finger protein 26 1 T(0.029)IRVT(0.971)PVR;T(0.009)IRVT(0.991)PVR 65.5 0.0036496000000000002 4723500.0 198.7 180.2 276.98 275.15 434.72 354.4 377.34 298.68 380.53 525.42 576.53 True False 232.23570225141168 189.371410303569 316.2599289170461 342.5617623519526 370.77326387010197 391.90237276831954 445.8977936319261 341.01880466913775 294.34056258154266 406.7272570799619 433.36168958146885 0.5358934761300653 0.4369823518236227 0.7297828500310745 0.7904754171574123 0.855574622270341 0.90433091385353 1.0289275779374139 0.7869149785678706 0.6792030067674193 0.93853994678849 1.0 8.759427810456469 -5.969531043467061 2.192074807327387 0.8565565258280892 0.4788269218573267 0.6852240631581371 0.09946481429861653 0.18131834331663882 1.688690592812141 0.018442325548435137 0.07670351263363795 1.072676969904471e-06 5.969531043467061 -0.37772960397076244 TIRVT(ph)PVR ddPTM_A549_PD325901_60min_R1 1 TIRVTPVR 8 1 Q9BY78 Q9BY78 RNF26 RING finger protein 26 1 T(0.003)IRVT(0.997)PVR 63.623999999999995 0.0038823 6159700.0 521.52 624.88 642.65 521.44 727.55 725.9 621.78 781.95 669.02 636.73 773.96 True False 574.464326477268 677.5408306165505 686.2640935683869 553.6481645238372 676.4493979112425 719.9885110713781 645.4421781510716 766.3533938220921 640.9034159797202 596.5267591349783 678.7678265366714 0.8463340541763756 0.9981923186807756 1.0110439339324087 0.8156664810539979 0.9965843569261992 1.0607286953258084 0.950902728322231 1.1290361208372461 0.9442159615164001 0.8788377053442296 1.0 9.406774372810808 TIS(ph)APVVRPK ddPTM_A549_PD325901_60min_R1 2 TISAPVVRPK 10 1 A0A087WZ58;O15151-5;O15151;Q5T0Y3;A0A087WTR9;O15151-4 A0A087WZ58 MDM4 Protein Mdm4 1 T(0.073)IS(0.927)APVVRPK;T(0.148)IS(0.852)APVVRPK 74.76 0.00044398 8590100.0 3649.8999999999996 3316.7 3353.0 4310.9 3955.1 3998.1000000000004 3862.4 3986.4 4208.6 4032.3 4838.9 True False 4020.4351610856334 3596.209948959664 3580.554743226952 4577.174502235749 3677.3074203542756 3965.540799165831 4009.3857455863767 3906.8881247296963 4031.72717780074 3777.699889843375 4243.745976314407 0.9473788448990262 0.8474140462297151 0.8437250399083922 1.078569388408803 0.866523925060173 0.9344434896194728 0.9447751510019535 0.9206225223034523 0.9500397055580125 0.8901804940559185 1.0 12.051122586136334 -9.19147617502044 0.012901695942913516 1.9124299202478854 4.001546434939158e-07 0.0 0.06833207169874492 770.6941449370618 5.909427785465875 445.08917558803046 430.10483053346474 6.434633638082566e-10 9.19147617502044 -1.912429520093242 TIS(ph)DGTISASK ddPTM_A549_MK2206_60min_R1 2 TISDGTISASK 11 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 T(0.349)IS(0.611)DGT(0.04)ISASK;T(0.009)IS(0.985)DGT(0.006)ISASK 165.35 7.0003e-14 119533000.0 21723.0 21729.0 21591.0 19760.5 25056.0 19576.6 18953.300000000003 19546.5 28359.0 27386.0 27596.0 True False 25389.311323640744 22834.913287937015 24652.928461433825 24601.823387082553 21370.2955914825 21648.182818104648 22396.869274510995 22317.276233645698 21935.731780017257 21199.483579596974 20743.151589145782 1.2239852374663331 1.1008410746940587 1.1884851901836315 1.1860214819022914 1.0302337858180086 1.0436303627763315 1.0797235501200575 1.0758864745183467 1.0574927192594743 1.0219991638440311 1.0 14.340347484723189 -2.0000000000089355 0.15875846598115717 0.9898264427515945 1.8028910729070282 0.6624504647125871 0.0417366861134926 25.72715852897649 0.2500846639441016 0.06347678612247926 4.92834812021328 0.009999999999794252 2.0000000000089355 0.8130646301554337 TIS(ph)DGTISASK ddPTM_A549_PD325901_60min_R1 2 TISDGTISASK 11 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 T(0.294)IS(0.662)DGT(0.044)ISASK;T(0.001)IS(0.991)DGT(0.007)IS(0.002)ASK 166.45 3.6427999999999996e-14 180036000.0 24164.0 24405.0 26015.0 23959.0 28867.0 25418.0 26756.0 24901.0 27279.0 26592.0 29242.0 True False 26617.11149140339 26461.694999354964 27780.534340903418 25438.893015163037 26839.48150574369 25211.00423531103 27774.214221444978 24404.330020543413 26132.55849527785 24912.976581780895 25645.419380310796 1.0378894997458536 1.0318292950073908 1.0832552171960912 0.9919468517131633 1.0465604444881738 0.9830607119908015 1.0830087747665595 0.9516058075961813 1.0189951705504592 0.9714396248441843 1.0 14.646413543492775 -6.912703371818998 0.5640715052523579 1.006356237154166 1.0486077631388624 0.19053650572100223 0.03708302338565983 1.5135923069503605 0.8056147950715049 0.00685247292898326 0.030167676302422373 1.2226344485921774e-07 6.912703371818998 0.0422515259846965 TIS(ph)EPDEQR ddPTM_A549_MK2206_60min_R1 2 TISEPDEQR 9 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 T(0.11)IS(0.89)EPDEQR;T(0.039)IS(0.961)EPDEQR 147.74 2.7646999999999998e-05 33316000.0 5576.8 5647.4 5852.1 4800.6 7782.6 7170.4 6340.8 6028.5 8708.6 8225.9 9033.8 True False 6518.02750033051 5934.828538004301 6682.015777368202 5976.747215507121 6637.789849547881 7929.166968673698 7492.841283355369 6883.058336506951 6736.116004776558 6367.663476864335 6790.458139803779 0.9598803742156429 0.8739953057387961 0.9840301846793049 0.8801684794245457 0.97751723269436 1.1676924892880385 1.1034367827752911 1.0136368113603962 0.9919972800202268 0.9377369458385821 1.0 12.72929319841423 -6.996271028480551 24.82318052084747 1.0194506506485415 0.9256208688958576 0.3796450484379319 0.06479950835866234 97.1713338139191 646841.7637781042 0.009421348226275082 0.017745777820621558 1.008623242014905e-07 6.996271028480551 -0.09382978175268386 TIS(ph)EPDEQR ddPTM_A549_PD325901_60min_R1 1 TISEPDEQR 9 0 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 T(0.291)IS(0.709)EPDEQR 179.2 2.9293999999999997e-08 19605000.0 3501.2 3318.4 3481.1 3801.9 4030.8 3009.5 3157.1 3399.1 3759.5 3831.1 3456.9 True False 3856.639246552786 3598.0532139258144 3717.3483795548286 4036.7347282586247 3747.6905135050993 2984.9916297965447 3277.2451681314087 3331.3022839576356 3601.5012890134194 3589.2036921803833 3031.7232150946015 1.2720947701792242 1.1868013531088593 1.2261503164426681 1.331498438960452 1.2361585301869837 0.984585800885323 1.0809842903251794 1.098814782092067 1.1879386848647522 1.1838823789421642 1.0 11.56592233156229 -7.152960529680544 7.458710902839133 1.084603051809274 1.2514713070062646 0.5880699169946296 0.06717616102303385 0.17328482513808074 10.670353343223157 0.011643065611027499 0.020231502675672936 7.031362206500084e-08 7.152960529680544 0.16686825519699067 TIS(ph)EPDEQRSELPR ddPTM_A549_PD325901_60min_R1 2 TISEPDEQRSELPR 14 1 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 T(0.031)IS(0.969)EPDEQRSELPR;T(0.019)IS(0.981)EPDEQRSELPR 110.22 3.2367000000000003e-06 10979300.0 1496.12 1516.8200000000002 1396.12 2101.3 1814.03 2588.6000000000004 1409.29 1851.35 2719.3999999999996 1661.1 2416.3 True False 1648.0050010146674 1644.647744680253 1490.8690987515697 2231.092528601448 1686.618790863763 2567.519299847595 1462.921302143079 1814.4233718940218 2605.1130749682375 1556.2178625149004 2119.1104181877095 0.7776871780112631 0.776102901748167 0.7035353542485908 1.052843924248887 0.7959088759075523 1.2116024147733513 0.6903468972580429 0.856219362767203 1.2293427716693328 0.7343731828027149 1.0 11.049243047276148 -6.986587002081511 0.4709507276775939 1.0944930344971662 0.7218761553011164 0.0 0.19564789247441075 1.2428031272297828 0.4506882511790658 0.044854571414907625 0.19876277926564553 1.0313664454163167e-07 6.986587002081511 -0.3726168791960498 TIS(ph)ETIER ddPTM_A549_MK2206_60min_R1 2 TISETIER 8 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 1 T(0.058)IS(0.933)ET(0.008)IER;T(0.012)IS(0.987)ET(0.001)IER 96.665 0.0024792 7149000.0 2089.7 2516.8 2277.0 1960.0500000000002 2621.8999999999996 2190.8999999999996 2137.2 2338.0 2858.2 2922.5 3037.7 True False 2442.390271740186 2644.894369878037 2599.9128389923962 2440.2623379899896 2236.221983209927 2422.73958379828 2525.5015756351086 2669.4186598247065 2210.8222636075075 2262.3052202356002 2283.35525374504 1.0696497041948707 1.1583367789747214 1.1386370275620297 1.0687177713531868 0.9793578899044258 1.0610436461100956 1.1060484659550514 1.1690772408044983 0.9682340319060875 0.9907810957252865 1.0 11.156939622080138 -8.783494445337375 24.999987861024415 0.984999388753828 1.0921582473039384 0.47419205152206023 0.05039572209090333 153.78265738678076 174315.87171285314 0.00938971546541681 0.01000000907174941 1.6462870223418878e-09 8.783494445337375 0.10715885855011043 TIS(ph)NPEVVMK ddPTM_A549_MK2206_60min_R1 4 TISNPEVVMK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5 A8MQ02 MLLT4 Afadin 1 T(0.13)IS(0.87)NPEVVMK;T(0.027)IS(0.973)NPEVVMK;T(0.015)IS(0.985)NPEVVMK;T(0.008)IS(0.992)NPEVVMK 141.37 5.1170999999999995e-08 47225000.0 19191.100000000002 24799.899999999998 20292.2 18693.2 26695.3 21177.4 17962.8 22258.5 29472.100000000002 30285.7 29972.3 True False 22430.088502652576 26062.108981062614 23169.93909152458 23273.034839169624 22768.45673305008 23418.378411579604 21226.40824575066 25413.71053879737 22796.716407272703 23444.139335667864 22529.350716602166 0.9955940934473338 1.1568069275008939 1.0284335036095982 1.033009567471442 1.0106130895406458 1.0394608662344762 0.9421668876639506 1.1280267619993898 1.0118674387927882 1.040604304605706 1.0 14.459518116050624 -5.976726680629446 24.85809355344039 1.0147440627240971 1.0803054775634633 0.08666218590185959 0.0547597522873998 240.82611480382138 257221.76174220722 0.006649400240136653 0.020672219993586316 1.055050674258613e-06 5.976726680629446 0.06556141483936617 TIS(ph)NPEVVMK ddPTM_A549_PD325901_60min_R1 5 TISNPEVVMK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5 A8MQ02 MLLT4 Afadin 1 T(0.004)IS(0.996)NPEVVMK;T(0.037)IS(0.963)NPEVVMK;T(0.05)IS(0.95)NPEVVMK;T(0.274)IS(0.726)NPEVVMK;T(0.128)IS(0.872)NPEVVMK 124.07 2.4236e-05 73919400.0 31887.099999999995 35223.8 33376.899999999994 34508.4 40096.7 36649.6 36614.9 37271.6 37131.7 38101.1 40639.3 True False 35124.25491795765 38192.23324393687 35642.05714560445 36639.90549373733 37280.44611810559 36351.13780873615 38008.300055942054 36528.188698995444 35571.18377796504 35695.390043625586 35640.923733748205 0.9855034953737375 1.0715837089197788 1.0000318008552391 1.0280290647754227 1.0460011192921166 1.0199269267063202 1.0664229788172463 1.0248945558166633 0.9980432618328259 1.001528195797737 1.0 15.121247108351698 -8.698036728349178 4.800802148179761 0.9990435076509587 1.0323152799862954 0.24285306813400143 0.023971854876554562 0.17610955618871632 8.005622753265117 0.003663996461722317 0.004118663191046701 2.0043025160344224e-09 8.698036728349178 0.033271772335336625 TIS(ph)PPTLGTLR ddPTM_A549_MK2206_60min_R1 1 TISPPTLGTLR 11 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 T(0.374)IS(0.626)PPTLGTLR 131.12 8.736100000000001e-08 5321900.0 1425.7 998.08 1147.6 906.93 1465.4 763.08 1276.3 1315.2 1710.7 1678.1 1698.4 True False 1666.3233049815674 1048.8780088556398 1310.3469363318725 1129.127890713635 1249.8416012036412 843.8286191084911 1508.187189305208 1501.6336276310751 1323.2291814265504 1299.0160445089346 1276.6404065446152 1.3052409248832073 0.8215923634240574 1.0264025246376842 0.8844525717071411 0.9790083368788959 0.6609759606406455 1.181371967841205 1.1762385241239792 1.0364932636027349 1.0175269698887894 1.0 10.318136500578762 TIS(ph)PSTSNNIPLMR ddPTM_A549_MK2206_60min_R1 4 TISPSTSNNIPLMR 14 0 O94806;O94806-2;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 T(0.004)IS(0.617)PS(0.348)T(0.023)S(0.008)NNIPLMR;T(0.015)IS(0.733)PS(0.096)T(0.113)S(0.043)NNIPLMR;T(0.006)IS(0.434)PS(0.434)T(0.101)S(0.024)NNIPLMR;T(0.223)IS(0.347)PS(0.347)T(0.08)S(0.003)NNIPLMR 147.73 3.193e-13 29993500.0 9192.1 11194.8 9088.1 9052.7 12439.0 9736.6 9943.8 9421.3 14189.6 13660.500000000002 14668.599999999999 True False 10743.501754731766 11764.56750314314 10376.929236735523 11270.611906391141 10609.239577843657 10766.920549368004 11750.459745367962 10756.79812652118 10975.678256135023 10574.583562370713 11025.981787235241 0.9743805097854866 1.0669859365052605 0.9411342624154226 1.022186697191819 0.9622036189218046 0.976504474352828 1.065706435228421 0.9755864225147103 0.9954377277170496 0.9590604960560418 1.0 13.428619503043125 TIS(ph)PSTSNNIPLMR ddPTM_A549_PD325901_60min_R1 4 TISPSTSNNIPLMR 14 0 O94806;O94806-2;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 T(0.015)IS(0.784)PS(0.088)T(0.088)S(0.024)NNIPLMR;T(0.004)IS(0.952)PS(0.041)T(0.001)S(0.003)NNIPLMR;TIS(0.888)PS(0.084)T(0.009)S(0.018)NNIPLMR;T(0.172)IS(0.641)PS(0.136)T(0.04)S(0.012)NNIPLMR 167.21 1.2421e-20 63938400.0 18827.3 19182.9 20282.2 20065.1 24259.4 22904.3 21466.9 22269.2 22575.9 23142.199999999997 26984.0 True False 20738.63363607428 20799.5103053934 21658.672058776538 21304.475655851573 22555.503434386617 22717.774974696466 22283.834626638425 21825.02333615056 21627.113432807026 21680.99754252743 23665.139065669453 0.8763368589774908 0.8789092786514335 0.915214231307702 0.9002472200451825 0.9531109608862361 0.9599679474376168 0.9416312562035666 0.9222436122427731 0.9138806821626098 0.9161576224996549 1.0 14.5304757794944 TIS(ph)QEFLTPGK ddPTM_A549_MK2206_60min_R1 1 TISQEFLTPGK 11 0 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;H7BXY5;Q0ZGT2-3 E7ETM8 NEXN Nexilin 1 T(0.394)IS(0.606)QEFLTPGK 88.18700000000001 0.00030546 837930.0 1060.9 1165.3 1394.7 968.63 1492.0 960.2 797.15 1097.5 1704.5 1136.5 1409.9 True False 1239.953983485268 1224.6087926012706 1592.489431946726 1205.944393483453 1272.5287764404482 1061.8077266708253 941.9818365232679 1253.0739859527866 1318.4334715271852 879.7638606664706 1059.78291873955 1.1700075190492822 1.1555279585537723 1.5026562551515257 1.137916428128262 1.200744750589042 1.00191058743774 0.8888441395560626 1.1823874151917138 1.2440599373834602 0.8301359128460151 1.0 10.049553064421177 -6.713362562805986 2.524197259515717 1.0994116627773962 1.265270077426719 0.2514507020557284 0.15257943533118154 0.35137896460402707 4.557992190957961 0.02122359586428501 0.04760980907385822 1.934806052083722e-07 6.713362562805986 0.16585841464932272 TIS(ph)QEFLTPGK ddPTM_A549_PD325901_60min_R1 1 TISQEFLTPGK 11 0 E7ETM8;Q0ZGT2-4;E7EUA0;Q0ZGT2-2;Q0ZGT2;H7BXY5;Q0ZGT2-3 E7ETM8 NEXN Nexilin 1 T(0.154)IS(0.846)QEFLTPGK 95.417 3.4655e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TIS(ph)QSSSLK ddPTM_A549_MK2206_60min_R1 4 TISQSSSLK 9 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 T(0.029)IS(0.949)QS(0.009)S(0.009)S(0.003)LK;T(0.13)IS(0.83)QS(0.021)S(0.011)S(0.008)LK;T(0.426)IS(0.568)QS(0.006)SSLK;T(0.001)IS(0.993)QS(0.006)SSLK 190.66 1.6830999999999997e-11 237983000.0 25155.0 29449.3 30487.7 32680.1 50206.1 39799.2 38229.2 40364.1 59506.1 59100.3 60450.1 True False 29400.54901929672 30948.14358186955 34811.314300109116 40686.72596706543 42820.8491976185 44010.72492742916 45174.950793219956 46085.834784871906 46028.06336171531 45749.50118305905 45438.67183211408 0.647038036849433 0.6810970112906501 0.7661164575568864 0.8954206698072944 0.9423877827202376 0.9685741935864484 0.9941961103117513 1.0142425587426709 1.0129711434299598 1.0068406346051095 1.0 15.471633045174912 -6.167186123969149 0.8951999046420983 1.0060808360246407 0.607564868996412 0.9948419857156069 0.009497816010735963 0.04140795919076126 0.04963238856836016 0.0016450116884620335 0.011823657740413648 6.80477666413521e-07 6.167186123969149 -0.39851596702822867 TIS(ph)QSSSLK ddPTM_A549_PD325901_60min_R1 1 TISQSSSLK 9 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 T(0.394)IS(0.556)QS(0.046)S(0.004)SLK 158.08 1.1162000000000001e-05 212190000.0 9926.8 9933.7 11034.0 10064.0 11699.0 10567.0 11621.0 12033.0 11171.0 12196.0 13517.0 True False 10934.561428276073 10770.847761323175 11782.83359283215 10685.630422997652 10877.30259935898 10480.945855477688 12063.24351425521 11792.992375294116 10701.52171819894 11425.942478617615 11854.494691322789 0.9223979353822576 0.9085876742774353 0.9939549427996207 0.9013990643413323 0.9175677987625157 0.8841326541863901 1.0176092552544833 0.9948118989775506 0.9027395934499175 0.9638489683563768 1.0 13.53314654748453 -7.743744396876699 24.999666629051585 0.9609406480321216 0.9229831819682214 0.2965721400032093 0.03876407112761971 395.1107486643963 558215.9588553358 0.007191313559966523 0.010653016739420795 1.8040792155730623e-08 7.743744396876699 -0.03795746606390027 TIS(ph)TSDPAEVLVK ddPTM_A549_MK2206_60min_R1 1 TISTSDPAEVLVK 13 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 T(0.002)IS(0.906)T(0.084)S(0.008)DPAEVLVK 135.6 2.0995e-08 5808200.0 1031.7 1079.7 998.5 1034.5 1649.7 1370.9 1089.8 1433.5 1534.3 1643.2 1653.3 True False 1205.825737356726 1134.6521182284323 1140.1023143319746 1287.952546440469 1407.031315344375 1515.9677280702297 1287.8025534003093 1636.7030149096322 1186.7834997736338 1271.999978748037 1242.7399812412916 0.9702960841030523 0.9130245548993302 0.9174101835793527 1.0363813556187493 1.1322008920474125 1.2198591426631569 1.0362606601857354 1.3170116352697019 0.9549732990711649 1.023544746244922 1.0 10.279308757227044 -6.26750677095597 21.12669797907897 1.0378570302054397 0.9315216870892131 0.19501335960642996 0.1089244941017957 91.96940845143862 320248.7161407646 0.0174085995355569 0.041617077621933736 5.40123693791285e-07 6.26750677095597 -0.10633534311622661 TIS(ph)TSDPAEVLVK ddPTM_A549_PD325901_60min_R1 2 TISTSDPAEVLVK 13 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 T(0.008)IS(0.864)T(0.113)S(0.015)DPAEVLVK;TIS(0.784)T(0.201)S(0.015)DPAEVLVK 219.89 2.8697e-38 17016000.0 6905.700000000001 5956.5 6808.299999999999 6740.6 7606.3 6705.1 7809.5 7128.2 7685.6 8089.8 8200.9 True False 7606.761580292349 6458.475159338569 7270.35217963378 7156.951552986685 7072.059728310471 6650.495888668817 8106.694796022375 6986.022459035276 7362.600959393947 7579.008647386099 7192.241289788348 1.0576343692879915 0.8979780987754692 1.0108604378938641 0.995093360278142 0.9832901099065583 0.9246764145846013 1.127144442099347 0.9713275983877426 1.0236865898600314 1.053775637108684 1.0 12.812225706757737 TIS(ph)VSGSTAK ddPTM_A549_MK2206_60min_R1 2 TISVSGSTAK 10 0 Q8TDJ6;Q8TDJ6-3 Q8TDJ6 DMXL2 DmX-like protein 2 1 T(0.034)IS(0.962)VS(0.004)GSTAK;T(0.023)IS(0.899)VS(0.078)GS(0.001)TAK 174.4 1.1795e-10 28403000.0 11130.0 14816.6 12707.2 13951.199999999999 18455.6 14100.4 11971.6 14510.2 19270.4 20491.0 21152.7 True False 13008.471897625626 15570.70165318457 14509.272036734368 17369.244626293173 15740.805687985494 15592.494968911991 14146.684757099609 16567.065285623823 14905.6851685054 15862.068868382443 15899.900805179155 0.8181479907967923 0.9792955216495844 0.9125385255238945 1.092412137604997 0.9899939553621719 0.9806661789885487 0.8897341518314088 1.0419602919929758 0.937470324572723 0.9976206180616932 1.0 13.956730144535651 -4.917426192134972 1.9006444680407555 0.9766924188115614 0.5885557226217062 0.42179498321654496 0.05435396787196058 2.081455250011182 3.2857245132458472 0.007265309687817259 1.9675465248114576 1.2094107034850406e-05 4.917426192134972 -0.38813669618985525 TIS(ph)VSGSTAK ddPTM_A549_PD325901_60min_R1 2 TISVSGSTAK 10 0 Q8TDJ6;Q8TDJ6-3 Q8TDJ6 DMXL2 DmX-like protein 2 1 T(0.116)IS(0.879)VS(0.005)GSTAK;T(0.307)IS(0.69)VS(0.003)GSTAK 190.26 2.0135e-14 68972000.0 26845.0 33239.0 34672.0 35268.0 40042.0 34349.0 34542.0 37257.0 38904.0 46018.0 47859.0 True False 29570.284637755518 36040.16718228067 37025.05041967341 37446.42426056055 37229.588057400804 34069.27313237464 35856.51471210768 36513.8799074489 37269.00017230432 43112.415626518996 41972.64640319728 0.7045132287751814 0.8586584423596244 0.8821233253677571 0.8921625741880325 0.8869964428682017 0.8117018118204575 0.8542829148217898 0.8699446672170627 0.8879354381015475 1.0271550478941183 1.0 15.357161808520333 -14.999999999999998 0.12129963943251598 1.5097057226582573 0.7797852293485504 0.6663028579267867 0.04705733521952999 39.256511038146115 0.3309171159677427 4.848512097003177 0.1731136233731971 1.000000000000004e-15 14.999999999999998 -0.7299204933097069 TISINS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TISINSPK 8 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 T(0.009)IS(0.002)INS(0.989)PK;TISINS(1)PK 127.76 0.0010635999999999998 149487000.0 6493.200000000001 6168.5 6220.0 5655.5 7865.299999999999 5673.2 5809.6 5912.2 8307.9 7379.2 8792.3 True False 7589.093416501595 6482.450302206244 7102.089529439045 7041.097753885045 6708.324789099904 6273.534258434624 6865.1291193195475 6750.272455353141 6426.173914990142 5712.233594923024 6608.929254864703 1.148309071536121 0.9808624138977792 1.074620298622706 1.0653916061671005 1.0150395821171845 0.9492512351856087 1.0387657144712603 1.0213867019963028 0.9723472089310022 0.8643205842638368 1.0 12.690200837207918 -2.0000000000363776 0.35315929380864847 0.9887871524588856 2.413087458532938 0.38736518864369895 0.055143377775336976 35.8727237891246 0.4398301391032495 0.01007467387976556 34.646967733003656 0.009999999999162375 2.0000000000363776 1.4243003060740522 TISINS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TISINSPK 8 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 T(0.229)IS(0.069)INS(0.703)PK;T(0.017)IS(0.04)INS(0.943)PK 115.04 0.001314 294390000.0 23598.0 22379.0 25696.0 24728.0 28620.0 26602.0 25112.0 25956.0 26996.0 23563.0 27846.0 True False 25993.651588070577 24264.95686910733 27439.885082600587 26255.392398637323 26609.829933639972 26385.362131864993 26067.65090181368 25438.287217911904 25861.452001118814 22075.228158713267 24421.11853033767 1.0643923436913585 0.9936054664721297 1.1236129519830464 1.075110149685445 1.089623716480608 1.0804321718142107 1.0674224798274725 1.0416511916237838 1.0589790131435568 0.9039400931325006 1.0 14.575841659367622 -10.419426271380392 0.4989005184491175 0.991155571075587 1.0698248395853578 0.45863657679445147 0.04208133572937565 0.997424680910469 0.389639658420257 0.03681750757000273 0.007624211084711943 3.806919808304982e-11 10.419426271380392 0.07866926850977074 TISPST(ph)SNNIPLMR ddPTM_A549_MK2206_60min_R1 1 TISPSTSNNIPLMR 14 0 O94806;O94806-2;Q15139;F8WBA3 O94806;Q15139 PRKD3;PRKD1 Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase 1 T(0.013)IS(0.152)PS(0.237)T(0.299)S(0.299)NNIPLMR 42.3 0.039405 7255300.0 3367.6 2791.5 3252.7 3035.3 3938.5 3030.1 2824.1 2688.5 4514.8 3978.0 5000.8 True False 3935.9685500848213 2933.575426539471 3713.9817704833413 3778.9486362597936 3359.151867299401 3350.7431707824085 3337.2024142574896 3069.603108185939 3492.205008654111 3079.367037159013 3758.9633449413027 1.047088835112406 0.7804213974279336 0.9880335160707283 1.005316702900385 0.8936378355005894 0.8914008632969873 0.8877986050990878 0.8166089494639305 0.9290340682235737 0.8192064552326987 1.0 11.87611913185221 -10.077120930383419 1.0564171561265252 0.9913938537166754 0.912866724376805 0.0 0.09068133674529433 0.6103284461699526 1.367416311905091 0.02581350127219608 0.013343068947507001 8.372961024722353e-11 10.077120930383419 -0.07852712933987038 TISS(ph)PRK ddPTM_A549_MK2206_60min_R1 1 TISSPRK 7 1 Q8NEM0-2;Q8NEM0-3;Q8NEM0 Q8NEM0-2 MCPH1 Microcephalin 1 T(0.051)IS(0.416)S(0.533)PRK 42.108999999999995 0.042218 4298900.0 1469.4 1793.5 1721.1 1313.3 1738.3 1412.9 1405.0 942.6 2244.2 2458.8 2285.6 True False 1717.398796619145 1884.7814893421257 1965.1778599867414 1635.0585589562781 1482.5983727120863 1562.412140192886 1660.2703133854238 1076.2164365914325 1735.8922832509866 1903.355372289236 1718.0224406490638 0.9996369989034118 1.0970645346344026 1.1438604138629895 0.9517096635469778 0.8629679901922381 0.9094247567584806 0.9663845326480012 0.6264274616720612 1.0104014023211312 1.1078757338991183 1.0 10.746533165609755 -6.2799697014510745 23.362145107695355 0.955413797995985 1.0818750317465942 0.21841051962023994 0.1198937118246063 433.44078782753286 546461.5880879888 0.01678152140411353 0.039081733565992406 5.248440747126533e-07 6.2799697014510745 0.12646123375060914 TIST(ph)SDPAEVLVK ddPTM_A549_MK2206_60min_R1 2 TISTSDPAEVLVK 13 0 E5RJU9;Q86UE4 E5RJU9 MTDH Protein LYRIC 1 T(0.018)IS(0.172)T(0.405)S(0.405)DPAEVLVK;TIS(0.23)T(0.743)S(0.027)DPAEVLVK 199.96 1.7553999999999997e-30 6123780.0 2322.92 2895.1000000000004 2401.54 2592.19 4642.0 3802.2 4417.7 3894.1 6994.4 6053.8 6232.0 True False 2714.9721060586267 3042.448224028096 2742.114483686342 3227.2766663678317 3959.1679492202156 4204.546280303907 5220.338906364975 4446.100600181092 5410.179567761655 4686.242375453303 4684.42240554995 0.5795745709955654 0.6494820408218318 0.5853687490772768 0.6889380134772347 0.8451773999990956 0.8975591687296387 1.1144039658294027 0.9491246124417597 1.154929914380021 1.0003885153271397 1.0 12.193655457622414 -7.069905081765991 1.1041297499842027 1.0688948004576428 0.5978885412156442 0.8948867329500467 0.06396891593206923 0.10862950230904207 0.26000306425821995 0.011434211183456292 0.028070316872655734 8.513240809727892e-08 7.069905081765991 -0.4710062592419987 down TIT(ph)LEVEPSDTIENVK ddPTM_A549_PD325901_60min_R1 2 TITLEVEPSDTIENVK 16 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 1 T(0.005)IT(0.991)LEVEPS(0.004)DTIENVK;T(0.006)IT(0.994)LEVEPSDTIENVK 174.17 3.9563e-28 3431300.0 2212.56 2192.17 2179.9 2548.5 2878.4 2525.3 2098.37 3090.6 2516.5 1928.75 3151.1 True False 2437.177462399417 2376.911859321283 2327.8411228035893 2705.915056936558 2676.2311139409235 2504.7347940605478 2178.224618622122 3028.9555584712016 2410.7402563644823 1806.9683958374662 2763.534676468688 0.8819058733555325 0.8600984382647802 0.8423419263108946 0.9791500283956062 0.9684087327468157 0.9063518599524718 0.7882023834075824 1.0960439846340828 0.8723394270720659 0.6538613071236923 1.0 11.43229900007486 -14.999999998859105 0.3098270892453076 1.8596856906559551 0.9009887572881907 0.0 0.13047052076155324 63.88500109070865 0.8446603827141609 34.575711216077565 0.026506335412780867 1.0000000026270087e-15 14.999999998859105 -0.9586969333677644 TIT(ph)PPAAPKPK ddPTM_A549_MK2206_60min_R1 2 TITPPAAPKPK 11 1 Q96BD5-2;Q96BD5;Q96BD5-3 Q96BD5-2 PHF21A PHD finger protein 21A 1 T(0.023)IT(0.977)PPAAPKPK;T(0.028)IT(0.972)PPAAPKPK 74.987 0.0005384 13972800.0 6191.5 6898.200000000001 6882.1 6312.2 8922.0 7085.0 6667.9 6404.0 9768.900000000001 9544.400000000001 9745.7 True False 7236.473832358409 7249.288915405545 7858.085265362129 7858.689283365429 7609.585618901935 7834.72999735763 7879.371119304394 7311.78661142747 7556.2597477277295 7388.313411126316 7325.573722363308 0.987837145132688 0.9895865075079535 1.072692128040864 1.0727745813784715 1.0387699185487143 1.0695039452596025 1.0755978190828206 0.9981179479644374 1.0314905062876085 1.0085644744208195 1.0 12.8387260372339 -9.88210397583602 0.6479307002353115 1.0018913748907246 1.0410555215586927 0.143991763738321 0.03197447091533906 0.9903657872469833 0.854005647260455 0.018002476205053415 0.007755439358326156 1.3118857786329332e-10 9.88210397583602 0.03916414666796819 TIT(ph)PPAAPKPK ddPTM_A549_PD325901_60min_R1 2 TITPPAAPKPK 11 1 Q96BD5-2;Q96BD5;Q96BD5-3 Q96BD5-2 PHF21A PHD finger protein 21A 1 T(0.052)IT(0.948)PPAAPKPK;T(0.094)IT(0.906)PPAAPKPK 72.49600000000001 0.0007735 17136600.0 8100.1 7628.1 9187.3 9315.9 11246.3 11135.2 9424.0 10281.400000000001 10474.8 9448.8 10822.0 True False 8922.41618902155 8270.946757819276 9810.805425722934 9891.321985056024 10456.39868562876 11044.51862306379 9782.63547701067 10076.329411397734 10034.580583098223 8852.201155457702 9490.96260631022 0.9400960217764778 0.8714549936505074 1.0336997239036703 1.0421832215922564 1.1017216186982608 1.1636879293698474 1.0307316425950859 1.0616762313127566 1.0572774332106807 0.9326979277710116 1.0 13.212338702458727 -5.803864606037874 7.7726108663233475 1.0456936333644202 0.9059417879494176 0.4826071865167295 0.05642848434385461 0.113266000830158 17.767905090797527 0.007069551933500084 0.022478158091520588 1.5708524508678392e-06 5.803864606037874 -0.13975184541500263 TITELGEK ddPTM_A549_PD325901_60min_R1 1 TITELGEK 8 0 P36957-2;P36957 P36957-2 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 0 61.961999999999996 0.016649 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TITEYAR ddPTM_A549_PD325901_60min_R1 1 TITEYAR 7 0 P11216;H0Y4Z6 P11216 PYGB Glycogen phosphorylase, brain form;Alpha-1,4 glucan phosphorylase 0 69.176 0.020902 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TITGNSAAVIT(ph)PFK ddPTM_A549_MK2206_60min_R1 2 TITGNSAAVITPFK 14 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 TITGNSAAVIT(1)PFK;TITGNS(0.001)AAVIT(0.999)PFK 139.58 9.9102e-10 5179500.0 6191.9 6224.0 6573.299999999999 6342.8 9175.6 7234.7 6643.3 6481.0 10640.9 8413.7 9307.0 True False 7236.941342579344 6540.7750151465825 7505.492781971329 7896.786284739115 7825.881394843817 8000.271151994812 7850.301617731953 7399.701597230084 8230.75314002559 6513.039326431569 6995.815039867357 1.0344672209510786 0.9349553951715964 1.072854662280156 1.128787173436884 1.1186518440304847 1.1435795695574162 1.1221425342143976 1.0577325951388197 1.176525264478926 0.9309907836778741 1.0 12.772276431469743 -5.898198962425684 6.261168931923691 1.0953861540075704 0.9858684670045019 0.21945066975609495 0.06995446267378043 0.1928660435002891 10.188046927382159 0.009291813203942196 0.029566235422113146 1.2641570691466133e-06 5.898198962425684 -0.10951768700306852 TITGNSAAVIT(ph)PFK ddPTM_A549_PD325901_60min_R1 2 TITGNSAAVITPFK 14 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 TITGNSAAVIT(1)PFK;TITGNSAAVIT(1)PFK 210.1 3.3648e-38 13908100.0 8544.8 7695.799999999999 8414.5 9354.5 10322.8 9100.2 9525.1 9660.6 9291.9 9464.0 10440.0 True False 9412.261805650702 8344.352074412453 8985.55857049902 9932.30621938907 9597.762139726714 9026.090988361693 9887.582892834715 9467.911754405912 8901.393756452662 8866.441424863659 9155.946184612701 1.0279944438149669 0.9113587941829324 0.9813904963312223 1.084792987979888 1.0482545382209125 0.9858173919294938 1.0799083670294598 1.0340724555936658 0.9721981297151097 0.9683806835567056 1.0 13.160493267933521 -3.7531118382027726 17.62867648434289 1.00126393733741 1.1499858157944596 0.0 0.050276775153833005 0.0 0.0 0.006616914695276191 0.0 0.00017655830945149768 3.7531118382027726 0.14872187845704965 TITLEVEPSDTIENVK ddPTM_A549_MK2206_60min_R1 1 TITLEVEPSDTIENVK 16 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 273.3 1.3150999999999998e-91 17921000.0 2839.7 3207.4 3091.1 2504.2 4238.2 2664.9 2799.1 2592.4 4407.5 4185.4 4125.2 False True 3318.9719360006725 3370.642960086944 3529.4644605223516 3117.7291124178096 3614.7663943095904 2946.8979491825467 3307.660237862735 2959.880638892031 3409.2082873312193 3239.9152331134583 3100.7989902719287 1.0703602350275567 1.0870240124115078 1.1382435532245934 1.005459922490621 1.16575321575185 0.950367295148053 1.066712240374106 0.9545541804476854 1.0994612350000295 1.044864644008843 1.0 11.598424290736078 -6.264107186277988 24.98852487593968 1.0420755311168912 1.097390740437257 0.16793275685617182 0.0609713404117408 353.2263780541655 3308573.053650539 0.008519128000083035 0.02064161910381331 5.443682831611218e-07 6.264107186277988 0.05531520932036571 TITLEVEPSDTIENVK ddPTM_A549_PD325901_60min_R1 2 TITLEVEPSDTIENVK 16 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 ; 492.79 0.0 82004000.0 27939.6 26639.0 25715.3 24927.7 32561.0 28554.0 29883.0 30998.0 33619.0 30997.0 30001.0 False True 30776.00762395357 28883.96201957862 27460.494896660934 26467.427414085723 30274.027689351897 28321.465691048517 31020.213917605037 30379.720572539434 32206.110343221713 29039.84413001887 26311.067192008213 1.1696981881944168 1.0977875511013824 1.0436860921020281 1.0059427548467135 1.150619527076705 1.0764088542805648 1.1789796928885952 1.1546365774842855 1.2240518451111735 1.1037121344450636 1.0 14.683382145780097 TITLVKS(ph)PISVPGGSALISNLGK ddPTM_A549_MK2206_60min_R1 1 TITLVKSPISVPGGSALISNLGK 23 1 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 TITLVKS(0.979)PIS(0.021)VPGGSALISNLGK 229.7 2.1118999999999996e-88 30470000.0 17239.0 19895.0 19847.0 17623.0 25984.0 21192.0 20388.0 19744.0 28571.0 25774.0 27849.0 True False 20148.521746915372 20907.570521584374 22661.603037102377 21940.63579112653 22161.788020796666 23434.52337388889 24092.23569345339 22542.77246346408 22099.714118511696 19951.635499179596 20933.324706700998 0.9625093972992068 0.99876970402564 1.0825611007623714 1.0481199760926214 1.0586845774050608 1.119484062003167 1.1509034532742517 1.0768844786632426 1.0557192623796317 0.9531039994231231 1.0 14.353513843410056 -5.570191352073051 5.054248818128634 1.0510487451098807 0.9700338256143174 0.2623494587767279 0.051075814858031705 0.19130659881596015 10.712151231130417 0.007192860841173487 0.031111831220915896 2.690349162984835e-06 5.570191352073051 -0.08101491949556328 TITS(ph)SYYR ddPTM_A549_MK2206_60min_R1 2 TITSSYYR 8 0 P62820;E7END7;Q9H0U4 P62820;Q9H0U4 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B 1 TIT(0.02)S(0.949)S(0.031)YYR;TIT(0.132)S(0.83)S(0.038)YYR 146.27 0.00082948 30444000.0 5754.1 6158.6 5308.5 4955.700000000001 6929.9 5701.2 5187.0 5859.5 9329.5 7677.1 8528.6 True False 6725.251405761687 6472.046434492567 6061.325123316267 6169.846722469824 5910.520889983016 6304.497199849722 6129.410758384479 6690.102068966161 7216.383146150111 5942.8377780224855 6410.713242614456 1.0490644568308525 1.009567296111516 0.9454993374254096 0.9624275004934708 0.9219755534678309 0.9834314780984625 0.9561199396098312 1.0435815510346806 1.1256755485770382 0.9270166287454843 1.0 12.64626916168379 -8.350105979696334 5.1999223401413985 1.060410969895727 0.9734544492727427 0.023635441619804354 0.05782298230896379 0.18753052679396903 8.390808303126521 0.009001446383740818 0.01092507927575519 4.465746024726584e-09 8.350105979696334 -0.0869565206229842 TITS(ph)SYYR ddPTM_A549_PD325901_60min_R1 4 TITSSYYR 8 0 P62820;E7END7;Q9H0U4 P62820;Q9H0U4 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B 1 TIT(0.049)S(0.902)S(0.049)YYR;TIT(0.019)S(0.981)SYYR;T(0.001)IT(0.079)S(0.847)S(0.073)YYR;TIT(0.044)S(0.916)S(0.04)YYR 135.71 0.0010835 41068400.0 12814.3 11789.599999999999 13477.5 13824.3 15600.7 14251.3 12775.8 14468.6 15358.7 15562.600000000002 16474.6 True False 14115.198302610936 12783.150967604792 14392.164196791302 14678.195613736736 14504.960651493251 14135.242137803463 13261.990060186003 14180.012422602882 14713.227250317961 14579.974780070068 14448.328641093916 0.9769433304876876 0.8847494603110682 0.9961127376253838 1.0159095891540724 1.0039196236330243 0.9783306075693784 0.917890947086175 0.981429255579923 1.0183342043086299 1.0091115133276887 1.0 13.818614993336626 -2.000000000005863 0.21116014694470794 1.0097341986065451 0.6570278187459566 0.1271472256242011 0.03756331282138947 55.436830965028236 0.6322298869976744 0.027159039273943895 6.667954508254841 0.009999999999865002 2.000000000005863 -0.3527063798605885 TIVMGAS(ph)FR ddPTM_A549_MK2206_60min_R1 5 TIVMGASFR 9 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 1 TIVMGAS(1)FR;TIVMGAS(1)FR;TIVMGAS(1)FR;TIVMGAS(1)FR;TIVMGAS(1)FR 116.77 0.00018751 87160700.0 7303.4400000000005 7170.58 7386.34 6808.09 9104.74 7373.36 6427.25 6920.3 10324.3 9788.500000000002 9697.3 True False 8536.08212003548 7535.531893976507 8433.834079562183 8476.072355626779 7765.444806976144 8153.604061159755 7594.998129328442 7901.273717529906 7985.862534519273 7577.271051591501 7289.192778135354 1.1710600034670906 1.0337951160490735 1.157032655914972 1.162827299759664 1.0653367311493467 1.11858806720235 1.0419532533301055 1.0839710181942983 1.0955757074327417 1.0395212861320209 1.0 12.831543340714644 -14.999999999933278 0.15536746497615964 0.6094027488610524 1.1346666729441093 0.3902549490131879 0.04337370894985982 36.37260530724462 0.36802302985273866 4.334402229033484 0.06912187908961634 1.0000000001536325e-15 14.999999999933278 0.5252639240830569 TIVMGAS(ph)FR ddPTM_A549_PD325901_60min_R1 7 TIVMGASFR 9 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 1 TIVMGAS(1)FR;TIVMGAS(1)FR;TIVMGAS(1)FR;TIVMGAS(1)FR;TIVMGAS(1)FR;TIVMGAS(1)FR;TIVMGAS(1)FR 113.93 0.00022461 126017200.0 14028.810000000001 14575.0 14476.57 16389.9 18091.699999999997 15698.999999999998 15273.150000000001 15657.600000000002 18402.299999999996 17161.6 20787.000000000004 True False 15453.004463735913 15803.286400966941 15459.037094887264 17402.266898836384 16821.001404976727 15571.15254898685 15854.378081038376 15345.296884850419 17628.915326722057 16078.013647183014 18230.330779649845 0.8476535423584192 0.8668677816097465 0.8479844541352963 0.9545776820606123 0.9226931539691905 0.8541343948826545 0.8696703462307059 0.8417453896108165 0.9670101733096836 0.8819375710467404 1.0 14.1540531180977 -8.874890419444638 5.268878575116693 0.9856814172902391 0.8779002739136871 0.26530289873666246 0.04556218967298861 0.09200599992014813 3.863231041199167 0.006266814587723191 0.006633599259239953 1.3338579468144869e-09 8.874890419444638 -0.10778114337655198 TIVRGS(ph)K ddPTM_A549_MK2206_60min_R1 2 TIVRGSK 7 1 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 TIVRGS(1)K;TIVRGS(1)K 58.676 0.0089686 14060800.0 3603.0 4061.1000000000004 3697.5 3445.6000000000004 4963.5 3710.9 3291.1 3441.2 5665.9 5134.7 4858.9 True False 4211.098315107381 4267.792643639422 4221.861098890813 4289.7721546788625 4233.37572510869 4103.584974903939 3889.0502693115805 3929.000638233014 4382.582696583089 3974.767703795972 3652.3010311820694 1.152998692921119 1.1685215997264464 1.155945543055197 1.1745395897146176 1.1590982476432277 1.1235615410309734 1.0648219399518903 1.0757603507182403 1.199951115520361 1.0882913729894648 1.0 11.834589965180054 -10.947544443444055 1.1148759980126028 0.9970414534805608 1.145070433772312 0.3498686478829074 0.04604925324588857 0.2896646704610686 0.6182800378123828 0.034381493538415644 0.007383474320305251 1.1283804590172556e-11 10.947544443444055 0.14802898029175127 TIVRGS(ph)K ddPTM_A549_PD325901_60min_R1 2 TIVRGSK 7 1 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 TIVRGS(1)K;TIVRGS(1)K 68.37100000000001 0.006363000000000001 23072000.0 7082.700000000001 6344.1 7488.799999999999 6861.5 8531.0 8105.0 7666.4 7438.6 7913.8 8146.299999999999 7988.4 True False 7801.730489991844 6878.739571620883 7997.035001812709 7285.319271402861 7931.811990352294 8038.995567204187 7958.149047215044 7290.231287531191 7581.2105069808185 7631.941227743743 7005.8774426398595 1.1135979117345367 0.9818526841127455 1.141475149585171 1.0398867709363906 1.1321653933134657 1.147464487214187 1.1359246735861201 1.0405878988348654 1.0821214857170225 1.0893626516064172 1.0 12.774350035228236 -10.366584067188569 0.6318528928290796 0.9961700186026751 1.0923020986219398 0.01175286022522537 0.05570657777399546 0.8041725950944911 0.5570081325568115 0.04027707487208615 0.010535321247650543 4.299479997429817e-11 10.366584067188569 0.09613208001926477 TIYLS(ph)SPDSAVGVQWPR ddPTM_A549_MK2206_60min_R1 1 TIYLSSPDSAVGVQWPR 17 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 TIYLS(0.531)S(0.469)PDS(0.001)AVGVQWPR 66.24600000000001 0.0010457 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TIYLSS(ph)PDSAVGVQWPR ddPTM_A549_MK2206_60min_R1 1 TIYLSSPDSAVGVQWPR 17 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 TIY(0.001)LS(0.259)S(0.735)PDS(0.005)AVGVQWPR 59.708999999999996 0.0032173 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TIYLSS(ph)PDSAVGVQWPR ddPTM_A549_PD325901_60min_R1 1 TIYLSSPDSAVGVQWPR 17 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 TIYLS(0.114)S(0.882)PDS(0.005)AVGVQWPR 91.441 5.3809000000000004e-06 1571300.0 951.04 1205.9 1001.8 905.59 1089.9 1168.4 1343.0 879.03 1373.7 1150.0 973.29 True False 1047.588880681356 1307.5254251064175 1069.788172312783 961.5262375558877 1013.349183950881 1158.884937781785 1394.1085999177994 861.4970570643056 1315.9681661704299 1077.3888037397721 853.581500193649 1.2272862994848097 1.531810875481467 1.2532935309283109 1.1264609616512888 1.1871733205569543 1.3576734471387593 1.6332460340360269 1.009273346328219 1.541701836171333 1.2621979312992944 1.0 9.73738509851895 -11.064575892562463 1.3727060831517042 0.9997940709453441 1.3424058104567036 0.058173877710215316 0.19632728759726334 0.4175701093296672 1.4025722800638663 0.13146634693501322 0.029033541740264537 8.618349606768887e-12 11.064575892562463 0.3426117395113595 TKDDEGAT(ph)PIKR ddPTM_A549_MK2206_60min_R1 2 TKDDEGATPIKR 12 2 H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150 H7C183 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 TKDDEGAT(1)PIKR;TKDDEGAT(1)PIKR 79.837 0.00030037 53890000.0 11282.6 13264.7 13032.400000000001 11339.5 16857.199999999997 13365.5 13181.599999999999 14014.400000000001 18786.6 18509.7 18038.7 True False 13186.827046913822 13939.816571885418 14880.590286730123 14117.678009049496 14377.528210597804 14779.82833869913 15576.526094605912 16000.984117300004 14531.465096035561 14328.345914455049 13559.192947206977 0.9725377534088518 1.028071259562454 1.0974539815657198 1.0411886654328906 1.0603528002423916 1.0900227171517305 1.1487797360251062 1.180083813218102 1.0717057536251713 1.056725571370124 1.0 13.726983690345797 -5.401196749257744 3.4334867953865875 1.061146257452911 0.9720178284572487 0.22639245472243041 0.05079704269899551 0.3843021084455096 7.346944209434508 0.008570326693371258 0.06993099120340876 3.970116497771939e-06 5.401196749257744 -0.0891284289956622 TKDPTHDVKT(ph)PNTETR ddPTM_A549_PD325901_60min_R1 2 TKDPTHDVKTPNTETR 16 2 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 TKDPTHDVKT(0.915)PNT(0.07)ET(0.015)R;TKDPT(0.005)HDVKT(0.973)PNT(0.017)ET(0.005)R 79.635 0.00019935 12517600.0 3234.6000000000004 3029.6 2481.8999999999996 3069.5 3218.0 2737.1 3185.3 3529.5 2804.2 3100.0 3296.2 True False 3562.974210813335 3284.9150243821264 2650.3366588771155 3259.09604365971 2991.978781497323 2714.809965082614 3306.518334563043 3459.1013536608157 2686.349225868181 2904.265470950691 2890.7882963333723 1.2325268561978586 1.1363388417438447 0.9168214297251578 1.1274073745882718 1.0350044606491242 0.9391244486931242 1.1438119971486587 1.1965944922526088 0.9292791275222407 1.0046621105510953 1.0 11.4972472431784 -2.0000000000000004 0.579281159893164 0.9969942511774019 13.744944226894637 0.2056918850665611 0.09512237087449221 126.24512425622657 0.9558194971225608 0.01727578585600707 2031.55682952264 0.00999999999999999 2.0000000000000004 12.747949975717235 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLR ddPTM_A549_MK2206_60min_R1 1 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 TKDQPDGS(0.002)S(0.017)LS(0.981)PAQS(0.975)PS(0.025)QSQPPAASSLR 201.66 8.946699999999998e-78 21741000.0 1142.4 1187.8 1232.3 1008.2 1855.3 1747.9 1422.3 1752.6 2335.4 1992.1 1527.9 True False 1335.2091910015733 1248.2539464960007 1407.0586699562277 1255.2090452598186 1582.387827701049 1932.861617837883 1680.7134994505975 2001.0364171123956 1806.43562886746 1542.083226426463 1148.480262105227 1.1625878433069996 1.0868745312243182 1.2251483254723181 1.092930446152337 1.3778102070299805 1.6829733009906866 1.4634239306557677 1.7423341812112527 1.5728921849785777 1.342716350736181 1.0 10.165510347292074 -6.767667897288003 24.51471218048591 1.3653926225091497 1.1439033027223349 0.30387078035962134 0.20058759646196359 194.23473034453176 764489.8287834354 0.04053754811310804 0.0780089694756208 1.707387520205756e-07 6.767667897288003 -0.22148931978681485 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLR ddPTM_A549_PD325901_60min_R1 2 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 TKDQPDGS(0.002)S(0.017)LS(0.981)PAQS(0.61)PS(0.383)QS(0.007)QPPAASSLR;TKDQPDGS(0.003)S(0.02)LS(0.977)PAQS(0.923)PS(0.075)QS(0.001)QPPAASSLR 197.7 1.4730999999999995e-77 84546000.0 3976.9 4972.8 3889.5 3936.7 5587.4 3904.9 4360.8 4790.3 4689.700000000001 5124.1 4423.0 True False 4380.631960360955 5391.875308043116 4153.464859463538 4179.86101810561 5194.960299483575 3873.099789065467 4526.752630321325 4694.753708582349 4492.608217871052 4800.563451515625 3878.9990397070887 1.1293201971743065 1.3900171804245323 1.0707568671574548 1.0775617563497102 1.3392527933896723 0.998479182237161 1.1669898816636854 1.210300301836852 1.158187504529596 1.2375778911969326 1.0 11.921468703374929 -14.999999999873822 0.19052813419977013 0.21226766377946601 1.2057983386911302 0.0 0.13021901296914573 46.520475314222146 0.5336132627602378 13.59570110519939 0.10008493416927004 1.000000000290536e-15 14.999999999873822 0.9935306749116641 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLREPGLESK ddPTM_A549_MK2206_60min_R1 1 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 TKDQPDGS(0.008)S(0.024)LS(0.968)PAQS(0.997)PS(0.002)QSQPPAASSLREPGLESK 134.43 5.9151e-30 26580000.0 895.39 1195.0 781.93 655.63 1538.8 1311.9 1356.1 849.93 1425.8 1682.1 1496.7 True False 1046.5099418162629 1255.8203957423143 892.8194317932907 816.2593794323487 1312.444558436033 1450.7243872312595 1602.4858163572774 970.4101803014598 1102.8585765347373 1302.112441730814 1125.0280831814205 0.9302078387740159 1.1162569312856898 0.7935974622682516 0.7255457811542646 1.166588263934377 1.2895005990684392 1.4243962798027885 0.8625652948655974 0.9802942637805174 1.1574043894518828 1.0 10.135745299402965 -6.775268493616786 24.99951732524295 1.0471328769788406 0.9004769810006955 0.21194131477075095 0.1803336455872142 399.53953054109377 722265.8710614233 0.027995334789302717 0.05309845875335958 1.6777664528821457e-07 6.775268493616786 -0.1466558959781451 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLREPGLESK ddPTM_A549_PD325901_60min_R1 2 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 TKDQPDGS(0.014)S(0.078)LS(0.908)PAQS(0.999)PS(0.001)QSQPPAASSLREPGLESK;TKDQPDGS(0.004)S(0.02)LS(0.976)PAQS(0.997)PS(0.003)QSQPPAASSLREPGLESK 169.15 2.8344999999999994e-63 80720000.0 2477.7 2263.26 3882.3999999999996 3017.3 3243.2 3074.7 2758.4 2857.7 3022.7 3721.8 3056.1000000000004 True False 2729.2342800136635 2453.9928631116622 4145.883010767769 3203.671768214512 3015.4088204326035 3049.660662613537 2863.3724214543968 2800.70093167772 2895.6664307224 3486.804912833638 2680.21907421407 1.0182877609786305 0.9155941343456243 1.5468448272212525 1.1953022045983073 1.1250605778622116 1.1378400713411085 1.068335215207747 1.0449522423830144 1.080384233729665 1.3009402650625064 1.0 11.388135212347008 -7.731544320350759 1.452231358259445 1.038330677767505 1.171431100955045 0.0 0.16632384388757984 0.6064138181337516 2.6022697553895413 0.024761838105237428 0.039752959378525306 1.855477445739335e-08 7.731544320350759 0.13310042318754012 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLREPGLESKEEESAMSSDR ddPTM_A549_MK2206_60min_R1 2 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESKEEESAMSSDR 45 3 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 TKDQPDGS(0.007)S(0.034)LS(0.954)PAQS(0.544)PS(0.101)QS(0.091)QPPAAS(0.064)S(0.061)LREPGLES(0.044)KEEES(0.036)AMS(0.032)S(0.031)DR;TKDQPDGS(0.017)S(0.06)LS(0.923)PAQS(0.977)PS(0.017)QS(0.005)QPPAASSLREPGLESKEEESAMSSDR 82.939 5.2279e-08 30550000.0 1463.1100000000001 1307.26 1215.1599999999999 945.3399999999999 1800.05 1373.21 1249.68 1267.69 2263.4 1778.79 2039.5 True False 1710.047198394882 1373.793950241086 1387.4879602239782 1176.948342437925 1535.265029511817 1518.5221707369744 1476.7306798800696 1447.3889396378033 1750.7435139070874 1376.9601035766925 1533.0358626635316 1.1154645759061415 0.8961264271105993 0.9050590361358702 0.7677239463877042 1.0014540865628625 0.9905327120649736 0.9632721033116368 0.9441324726240107 1.1420108012772157 0.8981917103911259 1.0 10.582175731353269 -8.734708572939484 23.283574407458264 1.0670606375074965 0.9425153790209251 0.0042476665452220175 0.09948168064978054 98.28820939736768 85612.45472802405 0.01561738196109494 0.017704716438154685 1.8420076395552793e-09 8.734708572939484 -0.12454525848657139 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLR ddPTM_A549_MK2206_60min_R1 2 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGSSLS(1)PAQSPSQSQPPAASSLR;TKDQPDGS(0.001)S(0.006)LS(0.993)PAQSPSQSQPPAASSLR 249.68 3.3687999999999996e-138 52199000.0 2418.8999999999996 2863.5 2420.7 2461.4 3380.7 2704.4 2569.0 2965.1000000000004 3323.6 3832.8 3654.2 True False 2827.1511835729234 3009.239919002607 2763.9916597931006 3064.443110496444 2883.4035083862113 2990.577812964567 3035.754046325377 3385.4120052379135 2570.809906698591 2966.967818004794 2746.761289210628 1.0292671571709087 1.0955593159198085 1.0062729770694505 1.1156568728901493 1.0497466669973539 1.0887650938986428 1.1052121850740808 1.232510454598267 0.9359422374258805 1.0801695180644728 1.0 11.423515821273057 -8.822064176540064 24.999995368996203 0.9697504035829088 1.0876754644843192 0.1991347435733294 0.0659601792270907 44.54213425669454 18367.630272685485 0.00998638706707912 0.010631319448480272 1.506384448379757e-09 8.822064176540064 0.11792506090141042 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLR ddPTM_A549_PD325901_60min_R1 2 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGS(0.005)S(0.041)LS(0.954)PAQSPSQSQPPAASSLR;TKDQPDGS(0.004)S(0.028)LS(0.968)PAQSPSQSQPPAASSLR 245.24 3.9542e-121 87629000.0 3414.4 3802.2000000000003 3376.3 2937.4 5147.1 4516.9 4096.3 4254.700000000001 4714.9 3622.0 3777.7 True False 3761.027374451572 4122.624737822061 3605.436021341236 3118.836526680575 4785.585452531035 4480.115863973423 4252.186938081371 4169.836670752422 4516.749149506416 3393.306301865613 3313.0668488133538 1.13521022849227 1.2443530197100212 1.0882472904621894 0.941374463300568 1.4444578606209215 1.352256404237081 1.2834594447149124 1.2586032401507197 1.3633136171472624 1.024219086639015 1.0 11.693951598095664 -5.222025405989863 19.373901902202732 1.1991608976522679 1.135207474117476 0.013807592990507378 0.15732488027121402 4873.026852384672 2394410.2355715055 0.024025658938082187 4.606251539502698 5.997559898315932e-06 5.222025405989863 -0.06395342353479183 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLREPGLESK ddPTM_A549_MK2206_60min_R1 2 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGS(0.001)S(0.005)LS(0.994)PAQSPSQSQPPAASSLREPGLESK;TKDQPDGS(0.004)S(0.02)LS(0.976)PAQSPSQSQPPAASSLREPGLESK 188.69 2.9401999999999994e-77 36080000.0 2111.0 2460.7 2155.74 1712.51 3348.1000000000004 2824.0 2176.15 2515.0 3661.0 3262.7 2941.4 True False 2467.285191005184 2585.9391195005105 2461.45634761944 2132.0750268774955 2855.5989252012528 3122.8338055805148 2571.5282864581427 2871.508951864475 2831.789345415678 2525.6538039564393 2210.9692014898314 1.115929244669097 1.1695952696934948 1.1132929151436488 0.964316927364174 1.2915597934503322 1.4124275469220628 1.1630773891944552 1.2987557447338243 1.2807909506416983 1.1423288041527497 1.0 11.110463213404033 -4.1010228066685634 13.51688607884324 1.1625606059512377 0.5166541990149047 0.0 0.128766590839796 0.0 0.0 0.019598316854813908 0.0 7.92459713924513e-05 4.1010228066685634 -0.6459064069363329 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLREPGLESK ddPTM_A549_PD325901_60min_R1 1 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGS(0.001)S(0.004)LS(0.995)PAQSPSQSQPPAASSLREPGLESK 248.31 1.5675999999999997e-149 48626000.0 1621.6 2006.6 1872.1 2248.6 2335.8 2204.3 1896.3 2131.0 2313.4 2158.1 2379.8 True False 1786.223638241174 2175.703224163312 1999.1519638518268 2387.490915058876 2171.7414660725444 2186.348911633336 1968.4647341951757 2088.49553326284 2216.1758430652053 2021.8371976963492 2087.0996867951458 0.8558401160914441 1.0424529493865344 0.957861273469708 1.1439275901214845 1.040554737185252 1.0475536580577005 0.9431579845703775 1.000668797219666 1.061844749001071 0.9687305357229914 1.0 11.027283794700008 -5.2583696650871055 24.272479282291904 1.0277415715648324 0.8558400198049277 0.4271379433855488 0.05432043953851965 124.74423278878328 986284.4960567898 0.006876909157765598 0.0668785943693932 5.5160771900736775e-06 5.2583696650871055 -0.17190155175990462 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLREPGLESKEEESAMSSDR ddPTM_A549_MK2206_60min_R1 1 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESKEEESAMSSDR 45 3 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGS(0.002)S(0.008)LS(0.989)PAQS(0.001)PSQSQPPAASSLREPGLESKEEESAMSSDR 91.476 3.3420000000000006e-11 13268000.0 550.26 766.75 726.27 984.86 959.84 761.51 888.48 876.97 912.42 1527.3 1391.2 True False 643.1304354346337 805.7742999459574 829.2660068401434 1226.150744212046 818.6488074923591 842.0924827505722 1049.9053153285995 1001.2831831079875 705.7583268353376 1182.2818692440824 1045.7266448332948 0.6150081750447879 0.7705400870553608 0.7930045685814398 1.1725346678983337 0.7828516290917159 0.8052701792683259 1.0039959491478492 0.9574999241485405 0.6748975273053758 1.1305840537634542 1.0 10.03029006197997 -5.464624822773837 2.0885790661180756 0.8738446843849008 0.6008862240858662 0.2365824128619357 0.15155291689203468 0.5754282278780385 3.698076757176809 0.021363834109086068 0.25053004774909693 3.4306402385887526e-06 5.464624822773837 -0.2729584602990346 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLREPGLESKEEESAMSSDR ddPTM_A549_PD325901_60min_R1 2 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESKEEESAMSSDR 45 3 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TKDQPDGS(0.018)S(0.065)LS(0.917)PAQSPSQSQPPAASSLREPGLESKEEESAMSSDR;TKDQPDGS(0.003)S(0.01)LS(0.987)PAQSPSQSQPPAASSLREPGLESKEEESAMSSDR 131.77 3.0809999999999996e-31 56776000.0 2449.3599999999997 2878.96 2649.44 3331.5 3312.5 3495.2 2990.6000000000004 3918.2999999999997 3452.37 3508.7000000000003 3041.1 True False 2698.0172240764696 3121.580062910998 2829.2469307769834 3537.2791886145374 3079.8414275046243 3466.736250029865 3104.4089195191145 3840.1464326531154 3307.2788948400726 3287.1600832015138 2667.063979121236 1.0116057376941636 1.1704181404525285 1.0608095467245537 1.326282090083203 1.1547684838514423 1.2998324289063776 1.1639799209248733 1.4398403873004932 1.240044828594543 1.232501398142159 1.0 11.381036718195027 -10.663147644231035 1.0449859845129852 1.0057093856693056 1.2114632369878613 0.0 0.132321291715196 0.4703766166511958 0.95065872381051 0.06658693414163136 0.019806152480667038 2.1719626655128267e-11 10.663147644231035 0.20575385131855572 TKDS(ph)GSISLQETR ddPTM_A549_MK2206_60min_R1 1 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 T(0.046)KDS(0.816)GS(0.139)ISLQETR 81.643 0.00016509 9924500.0 3124.4 4367.0 3626.3 3282.5 4962.1 3983.7 4394.0 3985.3 6796.2 7679.7 7162.0 True False 3651.7223357539547 4589.261647034884 4140.56386826444 4086.7126473570265 4232.181663254122 4405.252489833959 5192.3329231427415 4550.22847946938 5256.871551301292 5944.850436216712 5383.477738855705 0.6783203187406796 0.852471556427456 0.7691243595900047 0.759121305148312 0.7861426885278997 0.8182912057086588 0.9644941755153255 0.8452210077191779 0.976482453593033 1.1042769608406202 1.0 12.39432274288127 -7.965652224518839 0.6510245604875027 0.9966250685103303 0.7577507991075932 0.7439594466942971 0.061381665653403056 0.21494608156343228 0.18692593985559763 0.011329691676184176 0.019122895505715692 1.0823002916598289e-08 7.965652224518839 -0.23887426940273704 TKDS(ph)GSISLQETR ddPTM_A549_PD325901_60min_R1 1 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 T(0.016)KDS(0.49)GS(0.49)IS(0.004)LQETR 49.049 0.0086972 312610000.0 799.24 1117.8 1072.9 1182.1 1374.7 1077.8 886.66 1107.6 1292.8 1225.8 1379.4 True False 880.3782564306094 1212.0009289194406 1145.713445871816 1255.1156322561142 1278.1458144575417 1069.0227541434515 920.4023314989691 1085.5080491046092 1238.4681118331016 1148.4027788036628 1209.7425447370465 0.7277401793139144 1.0018668304195957 0.9470721277483483 1.037506399784369 1.0565436588289647 0.8836779022067193 0.76082496685196 0.8973050123987817 1.023745190430001 0.9492951899557135 1.0 10.240484333028249 -8.765719300020496 24.82248941424649 1.0112130120480098 0.9208367684858292 0.09474862683382645 0.09918922849628749 142.52078090685436 826583.6308119487 0.017175334960226753 0.018602205342788954 1.7150654571929936e-09 8.765719300020496 -0.09037624356218066 TKDSGS(ph)ISLQETR ddPTM_A549_MK2206_60min_R1 2 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 TKDS(0.475)GS(0.523)IS(0.001)LQETR;TKDS(0.414)GS(0.586)ISLQETR 162.29 8.7545e-19 35980000.0 5563.4 6193.4 5288.2 5029.5 8230.900000000001 5536.1 5807.5 5923.700000000001 8682.400000000001 9270.2 9197.7 True False 6502.365907929058 6508.617605849745 6038.146278067454 6261.727725782831 7020.145513407301 6121.926427434234 6862.647576502382 6763.4026155704105 6715.850262943754 7176.0553815664825 6913.657246393897 0.940510308248306 0.9414145616264941 0.8733650024691197 0.9057041016965215 1.015402595647759 0.8854830676813458 0.9926218977780362 0.9782669829485894 0.9713889514043645 1.0379535932750281 1.0 12.755233366540525 -7.735685628376773 0.4964079344365616 0.9924033187528098 0.9155333118960951 0.3958555921227943 0.039892962051581826 0.7572255750145834 0.38550553350250105 0.010270872201762808 0.022338616110529737 1.83786823488288e-08 7.735685628376773 -0.07687000685671475 TKDSGS(ph)ISLQETR ddPTM_A549_PD325901_60min_R1 6 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 T(0.006)KDS(0.009)GS(0.814)IS(0.17)LQETR;T(0.002)KDS(0.094)GS(0.757)IS(0.148)LQETR;TKDS(0.453)GS(0.546)IS(0.001)LQETR;TKDS(0.061)GS(0.84)IS(0.098)LQETR;TKDS(0.095)GS(0.903)IS(0.002)LQETR;T(0.251)KDS(0.306)GS(0.434)IS(0.009)LQETR 191.4 2.9528e-26 445210000.0 41483.6 39547.3 43555.5 44780.1 50975.0 47829.7 45611.799999999996 47482.0 46601.0 50875.6 49809.299999999996 True False 45694.98453338776 42880.08976226143 46511.4381504985 47546.065074014055 47394.69185420326 47440.19078108647 47347.58200873467 46534.93426109157 44642.52202934282 47663.305933515796 43683.07186716759 1.0460570326266896 0.9816180027964175 1.0647474218830457 1.0884322700242586 1.084967009607796 1.0860085784567441 1.0838885633480677 1.0652852986757886 1.0219638894694207 1.0911161668861427 1.0 15.414786692119042 -8.892864565458154 2.808139030244539 1.00881115363659 1.063219803752567 0.0 0.038065429836975244 0.2056644683932139 3.1222539362425223 0.005885107572259431 0.006138333866503574 1.2797803408671034e-09 8.892864565458154 0.054408650115977064 TKDSGSIS(ph)LQETR ddPTM_A549_MK2206_60min_R1 1 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 T(0.032)KDS(0.243)GS(0.267)IS(0.457)LQETR 136.26 5.0723e-09 168890000.0 7871.1 8196.4 8017.1 7808.5 11526.0 8812.4 8712.0 9230.5 12786.0 12100.0 11945.0 True False 9199.54925008096 8613.56175034502 9154.04533222922 9721.582850536885 9830.540668399872 9744.922318802313 10294.857630045419 10538.951642220689 9889.991415046394 9366.601596185035 8978.726834771209 1.024593956289503 0.9593299705909257 1.0195259863323904 1.0827351170645794 1.0948702248441182 1.0853345355227781 1.146583231620026 1.173769047233659 1.101491514002431 1.0431993052636075 1.0 13.13229517290444 -6.100556520336255 4.046884582324401 1.0727076917541702 0.9912105326596843 0.37468749155668923 0.04826614160182035 0.2606979333554374 7.475298936720919 0.008727408749713212 0.025124001337039136 7.933110062765745e-07 6.100556520336255 -0.08149715909448596 TKEAVLLLK ddPTM_A549_PD325901_60min_R1 1 TKEAVLLLK 9 1 P36578;H3BM89;H3BTP7 P36578 RPL4 60S ribosomal protein L4 0 85.256 0.005922600000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TKECS(ph)VEK ddPTM_A549_MK2206_60min_R1 3 TKECSVEK 8 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 TKECS(1)VEK;T(0.062)KECS(0.938)VEK;T(0.011)KECS(0.989)VEK 72.34 0.0015898 77213000.0 17552.6 17724.0 16544.6 12276.2 10045.699999999999 7327.599999999999 6596.0 7175.8 9790.1 26496.4 27649.199999999997 True False 20515.049760131496 18626.075894675123 18890.873059285725 15283.86955109957 8567.990837458321 8103.001768332776 7794.407819993069 8192.991624965842 7572.657981577175 20510.844837451008 20783.14056090046 0.9871005635561486 0.8962108416721462 0.9089518017707738 0.7353974971354076 0.41225679114047714 0.3898834126915851 0.3750351299002794 0.39421335774341065 0.36436543165298585 0.9868982398183975 1.0 14.343126057337638 -6.395234630884141 3.472112506341387 0.6037602499067908 0.9286083560605876 0.33512914079530565 0.22306289847738167 0.3132012908448362 6.902012114469949 0.040488028749319394 0.10046764919519162 4.024995221581973e-07 6.395234630884141 0.3248481061537968 TKECS(ph)VEK ddPTM_A549_PD325901_60min_R1 4 TKECSVEK 8 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 TKECS(1)VEK;T(0.036)KECS(0.964)VEK;T(0.002)KECS(0.998)VEK;T(0.001)KECS(0.999)VEK 86.31299999999999 0.0012931 292111300.0 29051.5 29223.0 31457.899999999998 27271.3 26925.5 23788.3 22348.399999999998 21952.5 25913.999999999996 30398.0 32018.5 True False 32000.78689341604 31685.724768127428 33592.82226571998 28955.786263383947 25034.34576793231 23594.575971785736 23198.88059151372 21514.640166096902 24824.924698362458 28478.665092244868 28080.42748199442 1.1396118137423448 1.128391823395309 1.1963073670178344 1.0311732712028983 0.891522957903141 0.8402498853308029 0.8261583840341883 0.7661792250097477 0.8840650561420607 1.0141820351739945 1.0 14.777277278206846 -6.532632078847348 3.44368253845362 0.9102233440155505 1.1506220935209277 0.7259810926830861 0.07129886723708045 0.11892465873450642 2.9757911557598993 0.012110893066687728 0.028061065261452706 2.9333772614249954e-07 6.532632078847348 0.2403987495053772 TKECS(ph)VEKGTGDSLR ddPTM_A549_MK2206_60min_R1 4 TKECSVEKGTGDSLR 15 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 T(0.075)KECS(0.921)VEKGT(0.001)GDS(0.003)LR;T(0.108)KECS(0.875)VEKGT(0.015)GDS(0.002)LR;T(0.199)KECS(0.8)VEKGT(0.001)GDSLR;T(0.028)KECS(0.964)VEKGT(0.007)GDS(0.001)LR 58.123000000000005 0.0029841 93641000.0 8664.199999999999 10044.699999999999 10369.4 9070.3 12527.7 8879.5 8535.1 6870.800000000001 13304.8 15553.800000000001 17089.2 True False 10126.505140647614 10555.932325617428 11839.936843499227 11292.523907181236 10684.89192534384 9819.12279626494 10085.817189876107 7844.75694094252 10291.284043399755 12040.185777416751 12845.480002073844 0.7883321712394349 0.8217623883197219 0.9217200790930135 0.879104860648112 0.8318016861665593 0.764402949105809 0.7851646795797275 0.6107017363053789 0.8011599443335924 0.9373091371807762 1.0 13.648973180545127 -10.484319310467942 0.9828781375092623 0.9915746209920464 0.8034505909554375 0.4126445334367326 0.07603446985350895 0.36540750031175406 0.6700888052386013 0.04304256047768124 0.01480932834113313 3.278541531448218e-11 10.484319310467942 -0.18812403003660894 TKECS(ph)VEKGTGDSLR ddPTM_A549_PD325901_60min_R1 3 TKECSVEKGTGDSLR 15 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 T(0.27)KECS(0.725)VEKGT(0.003)GDS(0.001)LR;T(0.006)KECS(0.932)VEKGT(0.039)GDS(0.023)LR;T(0.008)KECS(0.992)VEKGTGDSLR 95.03399999999999 6.7628e-06 231358000.0 17431.5 19484.8 21834.9 21132.6 22547.0 27018.3 25055.1 24686.5 22330.6 23588.5 24989.5 True False 19201.133047607946 21126.852477911536 23316.74761792014 22437.912706383173 20963.376502927345 26798.2719226888 26008.585541176784 24194.108391315385 21392.122538753294 22099.118084361395 21915.94992149227 0.8761259774908506 0.9639943764058846 1.0639168140758597 1.0238165713446457 0.9565351526181959 1.222774829231043 1.1867423330654265 1.1039497935514535 0.9760983491650858 1.008357756041845 1.0 14.419693591714571 -5.437932579510173 3.0428666636295136 1.0288779277138143 0.8748360312334428 0.25335241789946616 0.08476051068343855 0.37880128899312815 5.910626276793197 0.013240932458419306 0.1112234142143813 3.6481057623988985e-06 5.437932579510173 -0.15404189648037148 TKECSVEKGT(ph)GDSLR ddPTM_A549_PD325901_60min_R1 1 TKECSVEKGTGDSLR 15 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 T(0.005)KECS(0.215)VEKGT(0.761)GDS(0.018)LR 55.803000000000004 0.025038 35148000.0 7244.2 8026.7 10597.0 9655.6 10928.0 12057.0 11413.0 11252.0 9882.6 11025.0 8386.8 True False 7979.6258511018195 8703.1381787061 11316.17614493767 10252.004482541359 10160.454979553368 11958.81178948561 11847.327960433244 11027.57003297676 9467.26868966725 10328.879618461726 7355.276768305542 1.084884512502187 1.183250943894946 1.538511262241001 1.393829872822467 1.3813830940170133 1.6258819574291286 1.6107249711505485 1.4992732945815739 1.2871396941121842 1.4042815714249761 1.0 12.844563913667603 -9.769568411140835 0.9349508443488193 1.0421481850717385 1.4163425164148844 0.036928133605884095 0.19402921210188906 0.33352572170411454 0.6039154450639708 0.058921097422865235 0.035101607861607965 1.6999321550336316e-10 9.769568411140835 0.37419433134314595 TKEGVGS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TKEGVGSPK 9 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.001)KEGVGS(0.999)PK;T(0.001)KEGVGS(0.999)PK 66.533 0.0014849 72308000.0 18010.3 18188.0 19525.9 19430.6 23226.0 20585.0 17297.4 19565.8 22887.0 24044.0 26032.0 True False 19838.692397517898 19720.76659079156 20851.04499277518 20630.784031905638 21594.68588535017 20417.362584935003 17955.66202250046 19175.54476992683 21925.13898168643 22525.85773662528 22830.22903044424 0.8689659823851478 0.8638006462613147 0.9133086209941299 0.9036608438922961 0.9458812636769229 0.894312648274721 0.7864862852911586 0.8399190715238175 0.9603556299172089 0.9866680578012126 1.0 14.478657712148802 -8.904075928645334 4.922926203114071 0.9829895685244403 0.8787343509689627 0.5863091735236059 0.03968942168592581 0.11877915535541829 4.6891192017712315 0.007835188754254747 0.008255036719832578 1.2471654505430519e-09 8.904075928645334 -0.10425521755547762 TKETDS(ph)PSTPGKDQR ddPTM_A549_MK2206_60min_R1 3 TKETDSPSTPGKDQR 15 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 T(0.189)KET(0.026)DS(0.367)PS(0.367)T(0.051)PGKDQR;T(0.021)KET(0.124)DS(0.606)PS(0.124)T(0.124)PGKDQR;T(0.044)KET(0.172)DS(0.678)PS(0.093)T(0.013)PGKDQR 93.226 5.1563e-06 40173600.0 5978.92 5910.09 5842.13 5088.3 7555.33 5509.209999999999 5563.5599999999995 5076.139999999999 7842.91 9050.650000000001 8714.55 True False 6988.015525440417 6210.888336964594 6670.63188145044 6334.933728422465 6443.950965485133 6092.190945482376 6574.386836112887 5795.698390026768 6066.503407553696 7006.101879050589 6550.486725655539 1.0667933266807883 0.9481567701891709 1.0183414089405514 0.9670935907115356 0.9837362069976953 0.9300363775445558 1.0036486007007297 0.884773701979644 0.9261149074302706 1.0695543968680363 1.0 12.677386392930641 -2.000023378629061 0.9274304305453605 0.9612153230139301 58.470410356214366 0.17482891595978656 0.05021575459960401 988.0080853294663 1.8073771232931732 0.006170369485550668 120460.04532208251 0.009999461701661067 2.000023378629061 57.509195033200434 TKETDS(ph)PSTPGKDQR ddPTM_A549_PD325901_60min_R1 2 TKETDSPSTPGKDQR 15 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 T(0.003)KET(0.119)DS(0.719)PS(0.119)T(0.039)PGKDQR;T(0.029)KET(0.051)DS(0.854)PS(0.048)T(0.017)PGKDQR 116.29 1.9464999999999999e-07 41484200.0 4469.32 3723.1000000000004 4633.6 4529.79 4764.62 4572.67 5562.24 5259.08 5019.52 5298.650000000001 5497.66 True False 4923.04207626051 4036.858703220589 4948.063960100335 4809.584840400494 4429.969528246668 4535.431691583908 5773.914086974515 5154.18352373155 4808.567030250997 4964.092334726737 4821.482672538107 1.0210639362660905 0.8372650027788072 1.026253602088669 0.9975323291722316 0.9187981849397916 0.9406715733764907 1.197539113820984 1.0690038466981162 0.9973212301766271 1.0295779684122681 1.0 12.235261148003513 TKETDSPS(ph)TPGKDQR ddPTM_A549_MK2206_60min_R1 2 TKETDSPSTPGKDQR 15 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 T(0.002)KET(0.009)DS(0.054)PS(0.467)T(0.467)PGKDQR;T(0.008)KET(0.007)DS(0.103)PS(0.441)T(0.441)PGKDQR 71.558 0.00029864 255810000.0 4662.9 5125.799999999999 4898.9 4013.8 6065.4 4748.3 5072.8 4306.0 6576.200000000001 7693.7 7498.6 True False 5449.8835230403 5386.681325938037 5593.63768420722 4997.181180186332 5173.187694786796 5250.761954333552 5994.4620966132225 4916.388686571937 5086.7012000334835 5955.687826493287 5636.4906691683 0.9668930266932324 0.9556799863793398 0.9923972224072887 0.8865766792662318 0.9178029377541989 0.9315658026465491 1.0635096283229974 0.8722428502303156 0.9024589054778048 1.056630477376819 1.0 12.460581491618969 TKETDSPS(ph)TPGKDQR ddPTM_A549_PD325901_60min_R1 1 TKETDSPSTPGKDQR 15 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 TKETDS(0.015)PS(0.493)T(0.493)PGKDQR 79.805 0.00014097 21466000.0 747.31 730.78 917.77 914.39 1241.2 865.11 637.98 947.42 822.91 1006.4 1153.7 True False 823.1763610594553 792.365395272633 980.055391199344 970.8697935696371 1154.0223939075452 858.0648309863063 662.2586780160514 928.5229648633883 788.3259544466108 942.8557322467013 1011.8022139068659 0.8135743821719161 0.7831228123262127 0.9686234895801047 0.9595450377804802 1.1405612461071075 0.8480558939212691 0.654533730914539 0.9176921656240384 0.7791304897452759 0.9318577477766709 1.0 9.982711585659345 TKETDSPST(ph)PGKDQR ddPTM_A549_MK2206_60min_R1 2 TKETDSPSTPGKDQR 15 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 TKET(0.001)DS(0.021)PS(0.128)T(0.849)PGKDQR;T(0.001)KET(0.001)DS(0.059)PS(0.315)T(0.625)PGKDQR 71.558 0.002719 31163000.0 1863.6399999999999 1973.46 1806.43 1289.5700000000002 1728.96 1776.3899999999999 1444.5500000000002 1225.52 1938.1799999999998 3010.1 3010.9 True False 2178.17687037655 2073.900684670817 2062.608937084336 1605.5147078909965 1474.6322743394628 1964.3664107277514 1707.0060364419312 1399.2412129975949 1499.185324637465 2330.116319394757 2263.21043338741 0.9624279025244737 0.9163534482150439 0.9113641871989658 0.7093970071037442 0.6515665766582472 0.8679557065259855 0.7542409717009867 0.6182550205476526 0.662415347031426 1.0295623796268945 1.0 11.144155017340271 -6.105225315175215 6.769407188840209 0.7968599477059523 0.9332651036944649 0.19606398074750742 0.12869761534452384 0.3817623613654611 21.19269741678225 0.02084177611917604 0.0559001466073072 7.848283542397792e-07 6.105225315175215 0.13640515598851266 TKETDSPST(ph)PGKDQR ddPTM_A549_PD325901_60min_R1 4 TKETDSPSTPGKDQR 15 2 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 TKETDS(0.001)PS(0.022)T(0.978)PGKDQR;TKETDSPS(0.019)T(0.981)PGKDQR;TKET(0.001)DS(0.154)PS(0.154)T(0.69)PGKDQR;T(0.21)KET(0.045)DS(0.16)PS(0.21)T(0.374)PGKDQR 104.44 1.946e-06 444892000.0 11260.8 12011.5 11631.180000000002 11612.2 13395.7 11971.94 12603.900000000001 11385.35 11775.3 12590.400000000001 13183.4 True False 12403.988126237178 13023.751259362918 12420.541818767217 12329.459220780353 12454.832244656222 11874.444489924063 13083.548311618726 11158.26026261571 11280.425090708788 11795.439995308901 11561.925376458154 1.0728306681077178 1.1264344679028344 1.0742624099665388 1.066384604581951 1.077228215813965 1.0270300233992382 1.1316063618831886 0.9650866874937312 0.9756528193545909 1.020196862654573 1.0 13.497094045534332 -8.272721702143315 24.966078185225147 0.9864252689189995 1.0807180765156748 0.6871408426949152 0.029817179056081774 273.34045659257873 604859.6470949505 0.004486173454472166 0.00544693654637215 5.336767684117929e-09 8.272721702143315 0.09429280759667524 TKETNCES(ph)DRER ddPTM_A549_PD325901_60min_R1 1 TKETNCESDRER 12 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 T(0.012)KET(0.376)NCES(0.612)DRER 46.926 0.011989 9384100.0 1056.7 1413.5 1726.0 1494.3 1555.1 1399.4 1276.2 1561.6 1287.7 1407.9 1587.0 True False 1163.9754060985745 1532.6206056786814 1843.1367392811583 1586.5995171984707 1445.875140803757 1388.003750369591 1324.7664893634367 1530.4526629484983 1233.582447097374 1319.0049537262832 1391.8090608218738 0.8363039434527306 1.101171596607984 1.324274134408043 1.1399548701468947 1.0388459031513682 0.9972659249322348 0.9518306258052035 1.0996139528253641 0.8863158617238303 0.9476910237582451 1.0 10.442745589311457 -7.140206798115627 2.2844835410352604 0.9601503744097206 1.1144747444896024 0.17199971298205818 0.11694670750620402 0.3326844671465136 3.3942695905176605 0.018230905868678367 0.03446026526877228 7.240910873323458e-08 7.140206798115627 0.15432437007988176 TKEVYELLDS(ph)PGK ddPTM_A549_MK2206_60min_R1 4 TKEVYELLDSPGK 13 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK 105.6 2.8275999999999998e-05 104935200.0 8668.5 8995.400000000001 8584.1 7198.7 12012.8 9938.099999999999 9497.2 9496.9 12669.6 12191.6 11836.099999999999 True False 10131.53087552271 9453.2274375401 9801.454458144328 8962.38182316192 10245.733033259938 10989.743145623126 11222.718306252 10843.114658036471 9799.95582919379 9437.509092566072 8896.86971025831 1.1387747832072674 1.06253409855382 1.1016744964628413 1.007363501437823 1.1516110010520166 1.2352370556749506 1.2614232501698803 1.218756148079149 1.1015060519425388 1.0607673709871677 1.0 13.119082109745428 -9.807245976209684 1.10461842474607 1.0173969284585607 1.1423921118883875 0.2532132061091176 0.07319979189475952 0.4028837881354062 1.0027315046500689 0.024874581952902125 0.015662896452024195 1.5586694517765688e-10 9.807245976209684 0.12499518342982685 TKEVYELLDS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 TKEVYELLDSPGK 13 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK 131.11 1.1148e-08 167175000.0 10202.7 9717.7 11014.7 9961.3 12779.4 9676.9 10230.8 10113.0 10858.0 11154.3 11127.0 True False 11238.47059316923 10536.644683271112 11762.22377877183 10576.586877246278 11881.819030536632 9598.094534765967 10620.13869250857 9911.288281504974 10401.67601971211 10450.015594395256 9758.449539864521 1.1516655947503374 1.0797457772597545 1.2053373572022514 1.0838388653893798 1.2175929159645569 0.9835675734712278 1.088301850526965 1.0156621952100164 1.065914823581341 1.0708684357802536 1.0 13.252436229700441 -7.2694807976392894 24.99912390043241 1.0323547026084063 1.143525752579316 0.5544566012840646 0.04903488299800259 326.4983013795346 1015014.7125025427 0.00679917763506037 0.010983616674842248 5.376742058990871e-08 7.2694807976392894 0.11117104997090976 TKEVYELLDS(ph)PGKVLLQSK ddPTM_A549_MK2206_60min_R1 3 TKEVYELLDSPGKVLLQSK 19 2 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 TKEVYELLDS(1)PGKVLLQSK;TKEVYELLDS(1)PGKVLLQSK;T(0.013)KEVY(0.001)ELLDS(0.985)PGKVLLQS(0.001)K 203.99 1.3357000000000002e-55 105898000.0 46175.9 54367.0 55090.0 51814.0 72874.0 52641.0 51545.0 41428.0 84232.0 75528.0 80318.0 True False 53969.26302763442 57134.04807976769 62902.59038212167 64508.43232601882 62154.331135604014 58211.435679732254 60910.05929071297 47300.545867929 65153.586490864116 58466.17234352581 60372.82393596942 0.893933056450589 0.9463537458569649 1.0419024037841147 1.068501158641106 1.0295084291820444 0.9641993182474038 1.0088986288816526 0.7834741326344997 1.0791873270656531 0.9684187111329134 1.0 15.88161166427032 TKEVYELLDS(ph)PGKVLLQSK ddPTM_A549_PD325901_60min_R1 1 TKEVYELLDSPGKVLLQSK 19 2 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 TKEVYELLDS(1)PGKVLLQSK 161.5 2.0619000000000002e-27 41898000.0 15637.0 14534.0 15811.0 17702.0 17665.0 21937.0 20804.0 20792.0 19868.0 18109.0 20024.0 True False 17224.456728649016 15758.831187077427 16884.029539266743 18795.41233584106 16424.27134094164 21758.352345189167 21595.707604385625 20377.287248991535 19033.017052831106 16965.594649498715 17561.174942594327 0.9808259860148305 0.8973677011129052 0.9614407688812905 1.0702821649053282 0.9352603908696822 1.239003222524403 1.2297416132451142 1.16036013054951 1.0838122799327539 0.966085396048812 1.0 14.100101752164607 -6.370016098736079 1.5601443085783886 1.0747773291169596 0.9350118984040219 0.2963434764564167 0.09474696352073873 0.46545858314886834 2.1491597824571564 0.015080893364629514 0.051862601468531756 4.2656370634231643e-07 6.370016098736079 -0.13976543071293768 TKEVYELLDSPGK ddPTM_A549_MK2206_60min_R1 1 TKEVYELLDSPGK 13 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 68.809 0.0033911 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TKEYVSNDAAQS(ph)DDEEK ddPTM_A549_MK2206_60min_R1 2 TKEYVSNDAAQSDDEEK 17 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 TKEYVSNDAAQS(1)DDEEK;TKEYVSNDAAQS(1)DDEEK 156.74 1.097e-22 26908000.0 4909.200000000001 4856.299999999999 4815.8 4462.6 7162.3 6622.7 5989.1 7121.5 8078.6 7229.9 6168.5 True False 5737.75294158344 5103.464927065607 5498.752854641888 5555.937200333724 6108.7351578414355 7323.509718207535 7077.24194583391 8130.994433679061 6248.809998873285 5596.660568616378 4636.691208060793 1.23746712561071 1.100669571912259 1.1859217290731845 1.198254736195251 1.3174772448123189 1.5794689336817953 1.5263561078922552 1.7536199994391461 1.347687331002301 1.2070375872533194 1.0 12.178879934722946 -6.618614329430595 5.08335099146453 1.2815459538377576 1.171008443473383 0.058818775943136226 0.20708089686294373 0.7037442522292975 29.804708238168082 0.03870788148189007 0.08206917348062029 2.4064989170117684e-07 6.618614329430595 -0.11053751036437465 TKEYVSNDAAQS(ph)DDEEK ddPTM_A549_PD325901_60min_R1 2 TKEYVSNDAAQSDDEEK 17 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 TKEYVSNDAAQS(1)DDEEK;TKEYVSNDAAQS(1)DDEEK 142.45 9.2693e-17 34441000.0 7345.599999999999 7103.9 7363.6 6601.0 8054.1 6779.3 7472.2 7294.5 7637.6 7915.5 8147.2 True False 8091.319904455085 7702.570584139219 7863.338176923947 7008.7287780412935 7488.407801136609 6724.091628469752 7756.558659944737 7149.005475075455 7316.61823246945 7415.713979132316 7145.146049355998 1.1324219055234521 1.078014435384909 1.1005146882382735 0.980907700084451 1.0480412505789927 0.941071264607083 1.0855703447298808 1.0005401465124433 1.0239984154178217 1.0378673756851624 1.0 12.80274778549027 -6.248120329025233 24.309475816525545 1.0120640468494115 1.1010867697541262 0.5285890638606404 0.03730630243923706 280.2718924292299 511540.8275144235 0.0044833961793498845 0.011784381836582572 5.647804706385281e-07 6.248120329025233 0.08902272290471469 TKEYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_A549_MK2206_60min_R1 2 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR 29 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR 344.74 4.1011999999999977e-271 455830000.0 11260.3 12702.5 11246.0 10419.2 15644.2 11370.7 10709.0 11663.7 17461.6 17480.800000000003 16250.8 True False 13160.763352096476 13349.002993235767 12840.851904834644 12971.904467735654 13342.95890374642 12573.939926740213 12654.686680458719 13317.065193583161 13506.575480445348 13531.875139057134 12215.277860736704 1.0774018816550073 1.0928120625191156 1.0512124285038746 1.0619410066332555 1.0923172649747408 1.0293617607468717 1.035972069136012 1.0901974842821962 1.105711686171236 1.1077828350145305 1.0 13.576399060489665 -10.974990503894215 1.2496866029405167 1.000074004580515 1.0730999369144552 0.0 0.039184548441822536 0.29525304046637735 0.8215467583368806 0.018266050107004488 0.004230538605481152 1.0592768866398857e-11 10.974990503894215 0.07302593233394017 TKEYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_A549_PD325901_60min_R1 4 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR 29 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR 386.17 0.0 789283000.0 12754.800000000001 13791.5 15177.400000000001 15499.0 15833.500000000002 17750.2 15648.2 16471.9 15415.4 16857.7 17446.199999999997 True False 14049.657906412514 14953.758106273457 16207.42963312042 16456.338029217084 14721.409582609653 17605.648256260058 16243.700814023612 16143.355032544432 14767.544346497529 15793.301945046915 15300.428000573767 0.9182526074359261 0.9773424707931497 1.0592794941757604 1.075547561715265 0.9621567175805539 1.150663775915278 1.0616500932793822 1.0550917289332726 0.9651719772769588 1.0322130821735618 1.0 13.901284389700635 -8.762212661059523 24.999700088013494 0.9835534327908458 1.0355531163422091 0.03730754686195692 0.061781744462978065 31.397109316200407 1015038.2954540901 0.010389369334611641 0.01138045703811931 1.7289695270687189e-09 8.762212661059523 0.05199968355136331 TKFAS(ph)DDEHDEHDENGATGPVK ddPTM_A549_MK2206_60min_R1 6 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.209)KFAS(0.791)DDEHDEHDENGATGPVK;T(0.031)KFAS(0.969)DDEHDEHDENGATGPVK;T(0.023)KFAS(0.977)DDEHDEHDENGATGPVK;T(0.004)KFAS(0.996)DDEHDEHDENGATGPVK;T(0.477)KFAS(0.523)DDEHDEHDENGATGPVK;T(0.249)KFAS(0.751)DDEHDEHDENGATGPVK 289.76 2.1691999999999995e-156 2837704000.0 49274.8 53492.7 52145.3 47897.200000000004 67382.2 54154.409999999996 50476.00000000001 54210.5 72260.40000000001 72563.90000000001 68469.4 True False 57591.181586803534 56215.24994420491 59540.28764299964 59632.01615018699 57470.36764066063 59884.99372141199 59646.835828073104 61895.004387693494 55893.53477614721 56171.6645921827 51466.558320693504 1.1190019979176937 1.0922675185296404 1.1568733093050032 1.1586556027044526 1.116654571742621 1.1635709803686958 1.158943550419817 1.202625673976862 1.0860165629857887 1.0914206510987423 1.0 15.651347689203202 -9.545874727831539 1.0280773479346688 1.0166463985928087 1.1439023906057897 0.44713567335192905 0.03895155538390893 0.17354114399658427 0.3830762136653216 0.009852764068376828 0.006993780983864849 2.845281710109821e-10 9.545874727831539 0.127255992012981 TKFAS(ph)DDEHDEHDENGATGPVK ddPTM_A549_PD325901_60min_R1 6 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.008)KFAS(0.992)DDEHDEHDENGATGPVK;T(0.023)KFAS(0.977)DDEHDEHDENGATGPVK;T(0.001)KFAS(0.999)DDEHDEHDENGATGPVK;T(0.012)KFAS(0.988)DDEHDEHDENGATGPVK;T(0.043)KFAS(0.957)DDEHDEHDENGATGPVK;T(0.009)KFAS(0.991)DDEHDEHDENGATGPVK 237.33 2.3558999999999992e-98 3802622700.0 25034.7 25712.2 26424.3 27416.800000000003 32226.399999999998 28157.0 28998.5 30624.9 29978.2 29837.800000000003 30107.5 True False 27576.204314427927 27879.05733097376 28217.611900224278 29110.273467929488 29962.928839044554 27927.69872742359 30102.05378608806 30014.062344730726 28718.320505998687 27953.83621584921 26404.468367167337 1.0443764264050697 1.0558461902471024 1.0686680567790372 1.1024752728642961 1.1347673591603908 1.057688355587205 1.140036351707747 1.136703906602859 1.0876310822341158 1.0586782444220098 1.0 14.688494473741512 -10.391394420604557 0.8851648356271987 1.0031721290327869 1.092657957091655 0.26237354780335376 0.036356494801439126 0.3605168444226627 0.5347800665959948 0.018951861593646886 0.006550936155651992 4.060743701828666e-11 10.391394420604557 0.08948582805886818 TKFAS(ph)DDEHDEHDENGATGPVKR ddPTM_A549_MK2206_60min_R1 12 TKFASDDEHDEHDENGATGPVKR 23 2 P05455 P05455 SSB Lupus La protein 1 T(0.007)KFAS(0.993)DDEHDEHDENGATGPVKR;T(0.001)KFAS(0.999)DDEHDEHDENGATGPVKR;T(0.464)KFAS(0.536)DDEHDEHDENGATGPVKR;T(0.013)KFAS(0.987)DDEHDEHDENGATGPVKR;T(0.001)KFAS(0.999)DDEHDEHDENGATGPVKR;T(0.029)KFAS(0.971)DDEHDEHDENGATGPVKR;T(0.21)KFAS(0.79)DDEHDEHDENGATGPVKR;T(0.022)KFAS(0.978)DDEHDEHDENGATGPVKR;T(0.01)KFAS(0.99)DDEHDEHDENGATGPVKR;T(0.166)KFAS(0.834)DDEHDEHDENGATGPVKR;T(0.029)KFAS(0.971)DDEHDEHDENGATGPVKR;T(0.161)KFAS(0.839)DDEHDEHDENGATGPVKR 201.95 3.856699999999999e-61 3760546500.0 65445.21 77244.59999999999 77151.79000000001 63352.23999999999 94044.99999999997 71688.78 67993.26000000001 65636.37 112642.90000000001 121783.1 130870.59999999999 True False 76490.76146623603 81176.02020163754 88093.0739447718 78873.54164399025 80211.1050806582 79274.83911643909 80346.75522298686 74940.52645045277 87129.4630037485 94272.2131279639 98371.81817518712 0.7775678327914624 0.8251958915415577 0.8955112915356485 0.8017900157495002 0.8153870343009509 0.8058694104368505 0.81676598759108 0.7618088985302037 0.8857156919533857 0.9583254114514549 1.0 16.585957447123924 -9.646900213749278 0.8227549461053405 0.985006088701575 0.8155012639669035 0.7343502868411166 0.03735859013260023 0.18219035124928468 0.2611187615292525 0.013704543590408966 0.008281030236629232 2.2547572199389024e-10 9.646900213749278 -0.16950482473467154 TKFAS(ph)DDEHDEHDENGATGPVKR ddPTM_A549_PD325901_60min_R1 7 TKFASDDEHDEHDENGATGPVKR 23 2 P05455 P05455 SSB Lupus La protein 1 T(0.004)KFAS(0.996)DDEHDEHDENGATGPVKR;T(0.016)KFAS(0.984)DDEHDEHDENGATGPVKR;TKFAS(1)DDEHDEHDENGATGPVKR;T(0.028)KFAS(0.972)DDEHDEHDENGATGPVKR;TKFAS(1)DDEHDEHDENGATGPVKR;T(0.161)KFAS(0.839)DDEHDEHDENGATGPVKR;T(0.008)KFAS(0.992)DDEHDEHDENGATGPVKR 255.9 6.435799999999999e-111 7465737000.0 37840.399999999994 37504.99999999999 42333.00000000001 42598.200000000004 47339.0 52855.00000000001 44485.7 51133.6 48269.0 48473.2 56247.4 True False 41681.92955136981 40665.67797380893 45205.971949008854 45229.394066468514 44014.071950684236 52424.56640401939 46178.6276570091 50113.700234466836 46240.421789969056 45412.593879511944 49329.32638164601 0.8449726077524227 0.8243712403285408 0.9164117020221193 0.9168865132384423 0.8922496044272069 1.0627464481964835 0.9361292976056289 1.0159007614811597 0.9373819831274598 0.9206003246054589 1.0 15.590157966243417 -6.208341032039256 0.9032901404904419 0.9752375267688199 0.822729217063426 0.5439049371999563 0.04558697354330354 0.419141990190771 0.5243699986047419 0.00674133941686771 0.04537540336291983 6.189548466275595e-07 6.208341032039256 -0.15250830970539386 TKGATS(ph)PGQK ddPTM_A549_PD325901_60min_R1 1 TKGATSPGQK 10 1 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 T(0.001)KGAT(0.031)S(0.968)PGQK 57.802 0.0034757 8990700.0 1649.5 1432.7 1445.9 1571.4 1570.8 1651.2 1139.8 1308.4 1291.7 2034.2 2473.9 True False 1816.9560257022806 1553.4386570610875 1544.0274689030282 1668.4618090916647 1460.4724269658168 1637.7531746536158 1183.175712722492 1282.302935580057 1237.4143410077486 1905.760264841257 2169.6259833441914 0.8374512656332053 0.7159937560605111 0.711656055355271 0.7690089544926778 0.6731447900133883 0.7548550705173783 0.5453362569426751 0.5910248795986287 0.5703353253082073 0.878381932863737 1.0 11.083230646004026 -10.88094690385437 1.1403637233019697 0.9992747968310527 0.6761453402161616 0.5235151241413496 0.09101795771626137 0.254586838664743 0.5899726843759695 0.06441027514153853 0.01565221438596414 1.315385639297019e-11 10.88094690385437 -0.3231294566148911 TKGS(ph)PRTS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TKGSPRTSPK 10 2 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 2 T(0.033)KGS(0.966)PRT(0.102)S(0.899)PK;T(0.459)KGS(0.541)PRT(0.136)S(0.864)PK 78.505 0.00041948 53609000.0 8210.6 7299.6 6100.5 5422.3 10153.5 7061.700000000001 7303.0 6899.299999999999 10744.7 10668.2 12626.8 True False 9596.348550102875 7671.118460887529 6965.64263253101 6750.763743416298 8659.933600260116 7808.964406822914 8629.860568436836 7877.2969032201 8311.042605760133 8258.246210613315 9491.21707804848 1.011076711362713 0.8082333801667524 0.7339040478424332 0.7112642865401984 0.9124155025691092 0.8227569070023357 0.9092469909255568 0.829956457474659 0.8756561500402427 0.8700934919835719 1.0 13.212377383487034 -10.218049518545904 0.4052897264933421 1.0281311909600555 0.8249480274305884 0.06825592272306169 0.08773803154271062 1.3419951851588545 0.36836240348375326 0.11275311113024122 0.026750575478003292 6.05271857319226e-11 10.218049518545904 -0.20318316352946708 TKGS(ph)PRTS(ph)PK ddPTM_A549_PD325901_60min_R1 3 TKGSPRTSPK 10 2 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 2 T(0.023)KGS(0.965)PRT(0.191)S(0.821)PK;T(0.1)KGS(0.899)PRT(0.185)S(0.815)PK;T(0.066)KGS(0.934)PRT(0.136)S(0.864)PK 74.649 0.00050609 84955000.0 17065.300000000003 17229.8 14752.2 15375.599999999999 18255.3 16741.800000000003 12412.8 16617.3 16097.0 18142.9 22341.5 True False 18797.756693190124 18681.81571398835 15753.373004185114 16325.315891478804 16973.1107053661 16605.460331526094 12885.175896544784 16285.854915480331 15420.49906882538 16997.354197713325 19593.637134437242 0.9593806685412021 0.9534633914983401 0.8040045294345793 0.8331947651916997 0.8662562539516782 0.8474924904238831 0.6576204207588467 0.8311807962829298 0.7870156501838411 0.8674935685033811 1.0 14.258097607107167 -10.835590270435256 1.0838567755953898 0.9999026700089891 0.8327820261835374 0.0902308898713271 0.08588122507625187 0.44547171168706073 0.9296508879873696 0.05606186199386226 0.013810398128307361 1.4601912093291257e-11 10.835590270435256 -0.16712064382545178 TKGTSSFGK ddPTM_A549_PD325901_60min_R1 1 TKGTSSFGK 9 1 P61927;D6R9X9;D6RG19 P61927 RPL37 60S ribosomal protein L37;Ribosomal protein L37 0 47.894 0.033821 4004900.0 3998.4 3494.0 2879.1 3331.3 4491.3 4809.5 4087.6 3790.1 4515.9 3736.6 3996.6 False True 4404.314624533491 3788.4516421940675 3074.4930394347525 3537.0668350687693 4175.8465821438585 4770.333026584642 4243.155854820547 3714.5034822240696 4326.112427465272 3500.670438307857 3505.043536534781 1.2565648838952121 1.0808572283639803 0.8771625822583399 1.0091363482935929 1.1913822292410834 1.3609910909411338 1.210585777492365 1.0597595845831829 1.2342535498837857 0.9987523412530139 1.0 11.775216648884502 -3.902173288224322 9.084663980306175 1.119792832222088 1.2255719753752174 0.0 0.1377046382982949 0.0 0.0 0.01917927733625059 0.0 0.0001252641257718626 3.902173288224322 0.10577914315312942 TKHEIHHT(ph)GER ddPTM_A549_PD325901_60min_R1 2 TKHEIHHTGER 11 1 Q86T24 Q86T24 ZBTB33 Transcriptional regulator Kaiso 1 TKHEIHHT(1)GER;TKHEIHHT(1)GER 57.678999999999995 0.015132 4761400.0 296.06 214.6 333.29 325.71 213.07799999999997 350.35 366.55 240.77 284.325 352.86 278.8 True False 326.11579325214717 232.68509513876546 355.9090636355835 345.8283669589197 198.11213635919415 347.4968657581722 380.4992608338564 235.96765346958898 272.37580901682145 330.5803593805355 244.5093674588144 1.3337558255598476 0.9516408207876099 1.455605023785166 1.4143767600935437 0.810243543706212 1.42120062462108 1.5561745743665563 0.965065902881352 1.1139688096518465 1.3520151101622684 1.0 7.933745927457336 -8.329781753491966 24.9999923793206 1.0486658718993516 1.2646994352985093 0.09082904088655341 0.2302659247067342 213.69005843650856 78168.23278529834 0.03382419608637503 0.040891461997510925 4.679702518386902e-09 8.329781753491966 0.2160335633991577 TKKDDS(ph)HS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_MK2206_60min_R1 1 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 T(0.042)KKDDS(0.959)HS(1)AEDS(1)EDEKEDHK 69.845 0.00043985 15262000.0 1009.0 858.56 668.4 666.22 781.08 580.49 478.72 681.47 819.82 1682.0 944.2 True False 1179.294532318442 902.2570367937413 763.1891706554756 829.443929907752 666.1841666904196 641.9170665019235 565.6972273479504 778.0704594143467 634.1320789835243 1302.0350318002659 709.729081405691 1.6616122450312008 1.2712696441954008 1.0753246423887568 1.1686768256204938 0.9386457229158115 0.9044536617134825 0.7970607970967305 1.0962922047287378 0.8934847050758592 1.8345521776019835 1.0 9.471124612277377 -3.785712590210373 0.6565540659371495 0.9456502512321106 6.148542019973833 0.18739708874488747 0.2813708064560741 4.359177479289995 0.2872769478457689 0.014077180840887379 26.358589588806463 0.00016379001013724256 3.785712590210373 5.202891768741723 TKKDDS(ph)HS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 4 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 T(0.009)KKDDS(0.991)HS(1)AEDS(1)EDEKEDHK;T(0.034)KKDDS(0.973)HS(0.993)AEDS(1)EDEKEDHK;T(0.051)KKDDS(0.963)HS(0.993)AEDS(0.993)EDEKEDHK;T(0.059)KKDDS(0.948)HS(0.994)AEDS(0.999)EDEKEDHK 91.655 1.5338999999999998e-06 128466100.0 10067.43 9447.869999999999 8694.92 8018.070000000001 13096.6 9463.240000000002 9432.48 8444.64 12907.6 11013.58 10664.79 True False 11089.468082349746 10244.075162202644 9285.009558001468 8513.327973541816 12176.739996817234 9386.174510967227 9791.438188051106 8276.205030508072 12365.138459388105 10318.18067921068 9353.088439673915 1.1856477305731932 1.0952612314398036 0.9927212404638803 0.9102157034493543 1.3018950986463422 1.0035374487803372 1.0468668452356122 0.8848633351313219 1.3220380133408856 1.103184338067738 1.0 13.191227113927235 -8.761070440358932 24.999999995993203 1.1520734925289733 1.0537841338501797 0.08190089817855561 0.1316052297691797 20.128986924148155 1363970.9470216897 0.026365057886452374 0.029004063871889516 1.7335228063572208e-09 8.761070440358932 -0.09828935867879363 TKKDDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_MK2206_60min_R1 2 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 T(0.017)KKDDS(0.615)HS(0.659)AEDS(0.709)EDEKEDHK;TKKDDS(0.169)HS(0.83)AEDS(1)EDEKEDHK 115.66 1.1717e-14 178461100.0 4115.7 6414.610000000001 4851.93 4763.4 5863.52 4585.599999999999 3801.8599999999997 4921.49 5557.15 8990.869999999999 6989.4400000000005 True False 4810.329540795845 6741.0862499854475 5540.006631924631 5930.43321383715 5001.003975357973 5070.845148325071 4492.608749927049 5619.1262789310085 4298.464397945023 6959.826222569595 5253.769149269426 0.9155959091702298 1.2830952518960304 1.054482310608377 1.1287959263801721 0.9518887932206536 0.9651823299145544 0.8551210801776051 1.0695419077772743 0.8181677336437128 1.324730117526654 1.0 12.359137094474871 -6.8302962069083994 4.621121149491051 0.9246788438453044 1.1062398711208001 0.0 0.15830579253876795 0.1629711892569335 6.693359212200767 0.015065617857496364 0.029496200740843706 1.4780999186474112e-07 6.8302962069083994 0.18156102727549572 TKKDDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 4 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 T(0.004)KKDDS(0.155)HS(0.843)AEDS(0.999)EDEKEDHK;TKKDDS(0.083)HS(0.917)AEDS(1)EDEKEDHK;T(0.002)KKDDS(0.135)HS(0.863)AEDS(1)EDEKEDHK;T(0.001)KKDDS(0.027)HS(0.976)AEDS(0.996)EDEKEDHK 170.1 7.756999999999999e-35 1080337200.0 16151.07 18074.21 16338.19 18947.34 22573.93 18837.059999999998 18617.989999999998 17764.41 20027.109999999997 20364.31 22312.59 True False 17790.714736610687 19597.387108145518 17446.997822917736 20117.674159268736 20988.415032630786 18683.65722876734 19326.507797605038 17410.08490663995 19185.44021285104 19078.50399120511 19568.28288116164 0.9091607498038464 1.0014873163455695 0.891595748532128 1.0280755997571966 1.0725731613802614 0.9547928830666116 0.9876445427008133 0.8897093839235438 0.980435551211335 0.9749707783288417 1.0 14.25622954442984 -5.334931367591122 0.004413696578731164 1.926753053925362 4.4959262387312786e-05 0.010240739177048708 0.05425849857563555 71228.63071502233 47.13044241853299 9948.615631364602 10634.164256726328 4.62454098153148e-06 5.334931367591122 -1.9267080946629747 TKKDDSHS(ph)AEDSEDEKEDHK ddPTM_A549_MK2206_60min_R1 1 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TKKDDS(0.014)HS(0.791)AEDS(0.195)EDEKEDHK 152.23 2.8754e-22 16020000.0 1340.5 2097.4 1855.4 1617.1 2281.4 1905.1 1517.7 1507.4 2093.8 2493.7 3066.7 True False 1566.7436279215763 2204.1487012802763 2118.523619440708 2013.2895725943774 1945.8090821523053 2106.6964174969685 1793.4464445729946 1721.0785662188894 1619.55764311154 1930.3714380501335 2305.153753385755 0.6796699029816907 0.9561829435641225 0.919037880370917 0.8733862414328353 0.8441124932748401 0.9139071154809969 0.7780159748298018 0.7466220262709201 0.7025811795559287 0.8374154805139787 1.0 11.170647266053937 -11.07604492352255 1.4253785379189412 0.9990675209048522 0.8153772285728548 0.034297945106045 0.09786112568787064 0.38800969476883734 1.4190795517975632 0.06674513319510429 0.015037735906739843 8.39373157073411e-12 11.07604492352255 -0.1836902923319974 TKKDDSHS(ph)AEDSEDEKEDHK ddPTM_A549_PD325901_60min_R1 2 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TKKDDS(0.06)HS(0.931)AEDS(0.009)EDEKEDHK;TKKDDS(0.004)HS(0.671)AEDS(0.325)EDEKEDHK 151.41 4.195e-22 61837000.0 5017.7 4953.9 5494.4 5880.6 7159.200000000001 6048.5 6397.299999999999 6505.8 5837.8 6205.3 6832.1 True False 5527.093210164494 5371.382538713562 5867.283024511233 6243.831306188398 6656.362489899201 5999.243021373785 6640.752752236882 6376.036715298635 5592.457567496354 5813.496298996878 5991.795012250238 0.9224436414904615 0.8964563253134926 0.9792195848682339 1.0420635708369315 1.110912919465745 1.0012430347013408 1.1083077339361325 1.0641279787213704 0.9333526190503117 0.9702428549560144 1.0 12.548772552672917 -5.863616548410178 4.70109766210186 1.0014115636208982 0.9098347223522094 0.33042699353391924 0.056443048686139016 0.23416249080233606 8.628555596448082 0.009388233011105612 0.031411716491165476 1.3689369675648978e-06 5.863616548410178 -0.09157684126868881 TKKDDSHSAEDS(ph)EDEKEDHK ddPTM_A549_MK2206_60min_R1 2 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TKKDDSHS(0.004)AEDS(0.996)EDEKEDHK;TKKDDSHSAEDS(0.999)EDEKEDHK 119.87 5.8104e-15 122949700.0 2323.2200000000003 3163.34 2737.02 2303.02 3410.6899999999996 2195.48 2078.31 2561.9700000000003 2934.17 3623.37 3830.59 True False 2715.322738724332 3324.3404942824213 3125.170592261296 2867.2600033864965 2908.982019113724 2427.804236358323 2455.912024919617 2925.137093204066 2269.585179906671 2804.8482004602456 2879.3487840942844 0.9430336309807122 1.154545955893326 1.0853740990063265 0.9958015573609674 1.0102916448271693 0.8431782386939979 0.8529400948180504 1.0159023142186592 0.7882286412969528 0.9741258912273549 1.0 11.491526842096098 -6.916712429246862 2.0825005276779094 0.900327830198043 1.0619682280325509 0.35167060434200204 0.08276851815577839 0.26358792509361306 2.3095534048936663 0.014189333291309282 0.030086078829343783 1.2114000039772123e-07 6.916712429246862 0.1616403978345079 TKKDDSHSAEDS(ph)EDEKEDHK ddPTM_A549_PD325901_60min_R1 2 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TKKDDSHSAEDS(1)EDEKEDHK;TKKDDSHSAEDS(1)EDEKEDHK 202.97 1.0692e-55 468400000.0 6830.0 6270.8 6931.1 7152.1 7346.0 6115.5 5975.3 8618.8 6730.599999999999 6775.200000000001 7091.9 True False 7523.37657201975 6799.262323374514 7401.486126090165 7593.868973402377 6830.04230232422 6065.697395587559 6202.69331130962 8446.891272682202 6447.736288291982 6347.412715737134 6219.641259258128 1.2096158377014061 1.0931920411412157 1.1900181726836454 1.2209496748865811 1.0981408762374343 0.9752487551526515 0.9972750923659334 1.358099433807174 1.0366733416809737 1.0205432196412958 1.0 12.602615654661875 -7.7894734743935015 0.08646899644908142 0.8250582248999423 1.3783383982182018 0.17435253267363438 0.10502229484629116 21.058300815584538 0.9229324825411912 2.412337971354011 3.3073734880325865 1.6237775236704522e-08 7.7894734743935015 0.5532801733182595 TKKS(ph)LESINSR ddPTM_A549_MK2206_60min_R1 3 TKKSLESINSR 11 2 E5RJH3;A0A0C4DH44;E5RI99;P62888 E5RJH3 RPL30 60S ribosomal protein L30 1 T(0.022)KKS(0.949)LES(0.028)INS(0.001)R;T(0.015)KKS(0.98)LES(0.005)INSR;T(0.31)KKS(0.688)LES(0.001)INS(0.001)R 61.732 0.0015681 31411500.0 7540.2 7892.099999999999 8260.4 7271.599999999999 8735.2 6661.7 6583.4 5972.900000000001 9290.800000000001 12006.3 11151.8 True False 8812.801419809224 8293.774180115406 9431.8489307039 9053.142326434523 7450.263651449474 7366.636672321425 7779.518563090106 6819.576866239088 7186.448634358913 9294.06849126251 8382.500285977525 1.051333268016885 0.9894153172877855 1.1251832518850913 1.080005012535325 0.8887877598897883 0.8788113833583204 0.9280666027657519 0.8135492554228793 0.8573156444003468 1.1087465761032995 1.0 13.033164911900156 -6.75974929370943 24.991863202835408 0.9149952628824881 1.060886384293842 0.39922183822458834 0.07991448421450824 29.140698029022253 430899.873931294 0.010072480058207425 0.02013436474794529 1.7388043031066349e-07 6.75974929370943 0.14589112141135396 TKKS(ph)LESINSR ddPTM_A549_PD325901_60min_R1 3 TKKSLESINSR 11 2 E5RJH3;A0A0C4DH44;E5RI99;P62888 E5RJH3 RPL30 60S ribosomal protein L30 1 T(0.019)KKS(0.979)LES(0.002)INSR;T(0.02)KKS(0.975)LES(0.005)INSR;T(0.206)KKS(0.794)LESINSR 84.874 0.00015749 69173000.0 11783.9 11062.900000000001 13243.5 12545.900000000001 14639.699999999999 14061.8 13600.5 13966.8 15295.1 13735.3 15225.900000000001 True False 12980.19285315132 11995.209408250923 14142.283549635002 13320.8317491938 13611.457976223239 13947.285362974926 14118.074469979167 13688.221217257369 14652.300137143004 12868.050813919039 13353.210824932437 0.9720652975024826 0.8983015070693018 1.0590923587628265 0.9975751842636843 1.0193397044858017 1.0444892652284994 1.0572793805980067 1.025088377373584 1.0972866623048423 0.9636671645962833 1.0 13.70489906410224 -5.767875925670883 24.99977087782206 1.041725414516428 0.935183394500363 0.43660496384763836 0.03921971013707394 76.78829113287061 298253.8539153824 0.0054000080065419905 0.0173817020247707 1.706569872213921e-06 5.767875925670883 -0.10654202001606505 TKPATPS(ph)L ddPTM_A549_MK2206_60min_R1 1 TKPATPSL 8 1 Q8TD16 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 TKPAT(0.019)PS(0.981)L 62.463 0.0085978 4850300.0 1883.5 2330.7 2332.2 1749.3 2323.6 2024.9 2215.4 2236.0 2745.4 2736.7 2897.5 True False 2201.3887528461682 2449.322674775408 2662.941029028577 2177.8785785290597 1981.8015180543064 2239.1735739801643 2617.909503397915 2552.959847462809 2123.5712835029217 2118.4775692793037 2177.9707830681928 1.0107521964757422 1.1245893167239605 1.222670684901102 0.9999576649329505 0.9099302586889917 1.0281008319247298 1.2019947759399985 1.1721735972354757 0.9750228515514628 0.9726841084134845 1.0 11.088768885454579 -8.799373804681355 24.947476062139543 0.9882051986632873 1.0832584536367191 0.20001926016638294 0.08994101872919334 207.18887668063275 136256.2336698191 0.01657268639861151 0.01764312773291958 1.5871800475236521e-09 8.799373804681355 0.09505325497343187 TKPATPS(ph)L ddPTM_A549_PD325901_60min_R1 1 TKPATPSL 8 1 Q8TD16 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 TKPAT(0.04)PS(0.96)L 50.034 0.026698000000000003 6187700.0 2711.7 3096.5 2794.5 2991.3 3827.6 3267.5 2742.7 3309.5 3539.0 4035.5 3708.4 True False 2986.989787751968 3357.4529221676935 2984.151574693625 3176.0658072647966 3558.7625805031544 3240.890563336174 2847.0749493630265 3243.4894262474745 3390.2681372040147 3780.6978412972635 3252.29030948446 0.9184265559077515 1.0323349402040014 0.917553874569906 0.9765628234363413 1.094232753492192 0.9964948559127574 0.8754061533376254 0.9972939429142226 1.0424248190012984 1.1624724368153236 1.0 11.667240327241096 -2.000000001191313 0.25770975971673343 1.0159773005220896 0.5712362024827422 0.12994330203377313 0.07314992673464309 83.21268304388006 1.018554323423273 0.02645405679727509 16.472335254132517 0.009999999972569009 2.000000001191313 -0.44474109803934736 TKPIVKPQT(ph)SPEYGQGINPISR ddPTM_A549_PD325901_60min_R1 1 TKPIVKPQTSPEYGQGINPISR 22 2 O95793-2;O95793-3;O95793;A0A087X1A5 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 TKPIVKPQT(0.507)S(0.487)PEY(0.005)GQGINPISR 63.901 0.00062622 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TKPIVKPQTS(ph)PEYGQGINPISR ddPTM_A549_MK2206_60min_R1 2 TKPIVKPQTSPEYGQGINPISR 22 2 O95793-2;O95793-3;O95793;A0A087X1A5 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 TKPIVKPQT(0.028)S(0.972)PEYGQGINPISR;TKPIVKPQT(0.25)S(0.75)PEYGQGINPISR 173.05 6.525800000000001e-41 90384000.0 5287.4 5978.1 6522.8 5198.1 7595.1 6050.4 6495.6 5816.1 8058.5 7733.0 7721.5 True False 6179.783855481197 6282.359755470399 7447.831122608521 6471.634733351576 6477.8708511681325 6690.649312069528 7675.766439591717 6640.549986059234 6233.26261678018 5986.109929198253 5804.03844744126 1.0647386145771631 1.0824118090120525 1.2832153318853246 1.1150227194316105 1.1160971640399686 1.15275757951244 1.3224871801074332 1.144125774870901 1.0739526750599224 1.0313697924997824 1.0 12.50284136088086 -9.00920686358766 1.9099261992678023 1.0265335725264086 1.1636058319339013 0.3616656004153286 0.07532722876307331 0.23939346585296054 1.7624508205049585 0.015330534548079281 0.015175131662444087 9.790235448429399e-10 9.00920686358766 0.13707225940749268 TKPIVKPQTS(ph)PEYGQGINPISR ddPTM_A549_PD325901_60min_R1 3 TKPIVKPQTSPEYGQGINPISR 22 2 O95793-2;O95793-3;O95793;A0A087X1A5 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 TKPIVKPQT(0.025)S(0.975)PEYGQGINPISR;TKPIVKPQT(0.144)S(0.855)PEY(0.001)GQGINPISR;TKPIVKPQT(0.018)S(0.982)PEYGQGINPISR 191.22 1.4212e-50 185863200.0 9560.3 8283.3 9874.5 9839.6 11921.2 10921.4 11299.3 10542.099999999999 11003.3 11338.1 11955.2 True False 10530.854618079124 8981.362761243881 10544.642950192228 10447.36974464704 11083.896037907356 10832.45973937863 11729.301044714208 10331.82954538254 10540.86956600647 10622.210431027745 10484.786190256877 1.004393835695482 0.856609052227496 1.0057089156468422 0.9964313582622594 1.0571408740988166 1.033159812972136 1.118697208686412 0.9854115628016836 1.0053490242654362 1.013107014132398 1.0 13.356009821298574 -5.928338950024073 12.716206422468405 1.0149204591172254 0.9305078707795238 0.3498329088160804 0.04799171563239113 0.6509155037795702 113.60008635786666 0.006303360920044621 0.01960913565193391 1.179399800491067e-06 5.928338950024073 -0.0844125883377016 TKPIWTR ddPTM_A549_MK2206_60min_R1 2 TKPIWTR 7 1 P08238;Q58FF8;P07900;P07900-2;Q14568;Q58FG0 P08238;P07900 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-alpha A5 0 ; 61.961999999999996 0.027933999999999997 19644600.0 7029.5 6611.0 5455.8 3847.5 8712.6 7826.8 6835.9 6392.6 10106.8 10097.0 9410.5 False True 8215.907745225459 6947.47166213593 6229.514478249763 4790.13767272084 7430.988081511434 8655.02678099064 8077.894544677165 7298.770626516433 7817.625937243152 7816.080687328943 7073.613133412675 1.1614867240077182 0.982167321155732 0.8806693779766162 0.6771840051718846 1.0505222637085814 1.223565187656087 1.1419757332388876 1.0318306202017484 1.105181438367909 1.1049629856641685 1.0 12.788231602687455 -6.9673337785961005 24.999000885281067 1.0706655889274896 0.9184415487112876 0.30051616687360516 0.12064098882467258 211.5034272794967 161859.7894535804 0.018047976416011868 0.034107350683761424 1.0781178123925801e-07 6.9673337785961005 -0.15222404021620206 TKPIWTR ddPTM_A549_PD325901_60min_R1 2 TKPIWTR 7 1 P08238;Q58FF8;P07900;P07900-2;Q14568;Q58FG0 P08238;P07900 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-alpha A5 0 ; 70.816 0.021206 28062000.0 13837.8 11682.3 11054.2 11471.7 11229.900000000001 13485.5 11972.7 10850.8 15520.7 15435.2 16333.8 False True 15242.603269150059 12666.808420035413 11804.404486304627 12180.280854878996 10441.150565051834 13375.678559103277 12428.327650212828 10634.372281712067 14868.41895368814 14460.618837812295 14324.846148489174 1.0640675027953217 0.8842544128385887 0.8240510483632402 0.8502905182101127 0.7288839584607372 0.9337397707768048 0.8676063617984219 0.7423725303209391 1.0379461531079897 1.0094781254832144 1.0 13.806232023801881 -8.786046464233689 24.990812231703583 1.017919045395157 0.8591541308586956 0.3892507120304015 0.08579387926457366 153.85554408095376 156254.05738687626 0.014470703463607175 0.015408624955042721 1.636641411311805e-09 8.786046464233689 -0.15876491453646135 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPT(ph)SPIKK ddPTM_A549_MK2206_60min_R1 1 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPTSPIKK 40 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 TKPLASVTNANTSSTQAAPVAVT(0.005)T(0.002)PT(0.01)VS(0.007)S(0.005)GQAT(0.146)PT(0.413)S(0.413)PIKK 174.02 5.1397e-66 51617000.0 1289.8 931.28 764.48 820.21 1059.1 958.92 919.03 969.02 1576.0 1491.1 1215.1 True False 1507.4867074175684 978.6781741815086 872.894759399608 1021.1614868206259 903.3077929812869 1060.39227792042 1086.0058548829943 1106.381552499289 1219.03851635485 1154.2594743860745 913.3571349460436 1.6504898793029332 1.0715175222661657 0.9556992834475138 1.1180308860027144 0.9889973575721283 1.1609831875710506 1.1890265191251284 1.2113350957341 1.3346789220920297 1.2637548120257058 1.0 9.835035273500306 -11.146145599146829 1.5420045125939033 1.0005725941684893 1.1923819049406943 0.0 0.19395423278236906 0.6697541479481145 2.8684460061513946 0.12888739215878872 0.027912065150279153 7.142568281691309e-12 11.146145599146829 0.19180931077220498 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPT(ph)SPIKK ddPTM_A549_PD325901_60min_R1 1 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPTSPIKK 40 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 TKPLASVTNANT(0.002)S(0.002)S(0.002)T(0.002)QAAPVAVT(0.022)T(0.077)PT(0.069)VS(0.069)S(0.069)GQAT(0.069)PT(0.325)S(0.292)PIKK 44.382 0.0074197 3329200.0 242.91 221.13 321.42 296.83 291.52 493.44 194.28 279.32 456.44 367.9 443.49 True False 267.57004437910945 239.76540115580246 343.23349405547486 315.16451495015843 271.0446408894033 489.42158823951064 201.67343171409527 273.748743477699 437.2574141128568 344.67073121379303 388.94354151474045 0.6879405770232307 0.6164529695544917 0.8824763941798652 0.8103091613830388 0.6968739983027359 1.258335814842068 0.5185159546001926 0.7038264278964105 1.124218215348063 0.8861716275618642 1.0 8.603416940646426 -8.762366853823488 24.998564397908524 1.058658610948046 0.776905263879648 0.2148104622403202 0.1891842312982567 20.450098594758867 551197.4591362672 0.03049563837052267 0.03339156825350948 1.7283557792990271e-09 8.762366853823488 -0.28175334706839805 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPTS(ph)PIKK ddPTM_A549_MK2206_60min_R1 1 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPTSPIKK 40 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQAT(0.008)PT(0.194)S(0.798)PIKK 205.4 5.257299999999999e-99 61437000.0 1407.1 1406.2 1030.4 888.32 1121.4 1017.1 1264.5 882.24 757.15 1350.2 1343.1 True False 1644.5840797079086 1477.769573634178 1176.5262140086797 1105.9584398782008 956.4435455095978 1124.728846903662 1494.2432820468819 1007.3002217466852 585.6567339200986 1045.188882245374 1009.5712023257605 1.628992661358864 1.4637596340206849 1.165372200889153 1.095473441923058 0.9473760179630997 1.1140658968011485 1.4800771640520023 0.997750549368045 0.5801044369836567 1.0352800078266502 1.0 9.979526948298084 -2.000020586987126 0.28007259776815635 0.8212639275875373 7.174041939258687 0.425910601860796 0.21237141590326453 28.610044804365565 0.3557720080619135 0.09531104283858215 90.46687310216713 0.009999525978338518 2.000020586987126 6.352778011671149 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPTS(ph)PIKK ddPTM_A549_PD325901_60min_R1 2 TKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPTSPIKK 40 2 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 TKPLASVTNANTSSTQAAPVAVTTPT(0.002)VS(0.001)S(0.001)GQAT(0.059)PT(0.207)S(0.731)PIKK;TKPLASVTNANTSSTQAAPVAVTTPTVS(0.001)SGQAT(0.032)PT(0.19)S(0.776)PIKK 210.07 4.933299999999999e-114 190328000.0 2124.48 2237.6099999999997 2250.63 1780.45 2815.3999999999996 1849.12 2177.8 2374.91 2628.2 2883.25 2741.8 True False 2340.1556456404855 2426.181247592979 2403.371285937631 1890.4243528046686 2617.656016602724 1834.061379793781 2260.677370737886 2327.5405569691484 2517.7458938116933 2701.2011029414753 2404.575981702215 0.9732092740874315 1.0089850626701635 0.9994989986701392 0.7861778405797869 1.0886143904463639 0.7627379603515115 0.9401563468739041 0.9679629900160058 1.0470643942926539 1.1233585977305145 1.0 11.231566799020042 -8.564084727295006 4.1601965247125285 1.022096465518781 0.9363474226195425 0.21259676666012517 0.09436544968396925 0.27999530691599256 10.602845274727905 0.01429933855059308 0.016453844872517623 2.72844543353281e-09 8.564084727295006 -0.08574904289923846 TKPLATTQPAKT(ph)STSK ddPTM_A549_PD325901_60min_R1 2 TKPLATTQPAKTSTSK 16 2 E7EVA0;P27816-4;H7C4C5;B5MEG9;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TKPLATTQPAKT(0.384)S(0.384)T(0.103)S(0.128)K;TKPLATT(0.003)QPAKT(0.575)S(0.418)T(0.004)S(0.001)K 82.36 7.0715e-05 41743000.0 4559.2 4150.5 5140.200000000001 4776.1 5789.9 5542.4 5644.8 5895.200000000001 5920.4 4588.200000000001 5993.4 True False 5022.0466276943525 4500.2772011810175 5489.04488253361 5071.108849689897 5383.237398070651 5497.264531976864 5859.615952953081 5777.6156113050665 5671.586176745589 4298.500268972889 5256.249795292889 0.9554429152495242 0.8561764330932551 1.0442891978705418 0.9647769887632072 1.0241593546203764 1.0458529837946078 1.1147902366056732 1.0991896953754128 1.0790176261837185 0.817788430226872 1.0 12.359818123843436 -6.114745704233841 1.048578338214261 1.0489706459353616 0.9044260009568756 0.1262294139325949 0.08502923705728169 0.46872061235602513 0.8143704132541638 0.008154461640370226 0.053605497918850435 7.678109399698928e-07 6.114745704233841 -0.14454464497848596 TKPLATTQPAKTS(ph)TSK ddPTM_A549_MK2206_60min_R1 1 TKPLATTQPAKTSTSK 16 2 E7EVA0;P27816-4;H7C4C5;B5MEG9;P27816;P27816-6;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TKPLATTQPAKT(0.216)S(0.777)T(0.005)S(0.001)K 74.047 0.00011563 11880000.0 2016.8 1845.3 2047.5 1788.8 3032.8 2190.6 1825.2 1700.8 3096.2 2932.9 3416.3 True False 2357.186533974067 1939.2178880864371 2337.866288026758 2227.056080302282 2586.679137525867 2422.407837997405 2156.815214228523 1941.893608481549 2394.9156436154103 2270.3558530124865 2567.9384249166064 0.9179295387702361 0.7551652599105498 0.910405898109757 0.8672544710158328 1.0072979602732761 0.9433278518257587 0.839901452971391 0.7562072320891463 0.9326219119499273 0.8841161575306137 1.0 11.326394894002172 -9.273102242667541 2.1570961042012278 0.9776941481168698 0.8770685229664763 0.06588058725963997 0.07754205098622717 0.2819224076873467 2.6983805148048043 0.015415024887992073 0.013983580665765601 5.332093512625865e-10 9.273102242667541 -0.10062562515039353 TKPLT(ph)PSIGAK ddPTM_A549_MK2206_60min_R1 2 TKPLTPSIGAK 11 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 TKPLT(0.987)PS(0.013)IGAK;T(0.007)KPLT(0.991)PS(0.002)IGAK 125.22 1.3923e-06 40110000.0 13307.1 13826.0 13344.7 12730.3 18314.1 14804.8 14543.2 13403.0 20589.0 19729.5 20446.2 True False 15553.013152640975 14529.684344379271 15237.179122750029 15849.224071484889 15620.120150541561 16371.434109369118 17185.511189770044 15302.916294966017 15925.624373876923 15272.592247267161 15368.844253587205 1.0119832627629617 0.9453986327558712 0.9914329842462654 1.0312567301725084 1.016349693757597 1.0652352147786195 1.1182045250903505 0.9957102852021029 1.0362278458355618 0.993737199445067 1.0 13.907721057114825 -6.148062204369265 4.149796393951489 1.0272726911820187 0.9766720281704958 0.2545185871505192 0.03699979768447637 0.25453669580218574 7.440090085783505 0.005262518259799311 0.014811966458025206 7.111116532297787e-07 6.148062204369265 -0.050600663011522884 TKPLT(ph)PSIGAK ddPTM_A549_PD325901_60min_R1 1 TKPLTPSIGAK 11 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 T(0.014)KPLT(0.844)PS(0.142)IGAK 104.41 7.6905e-05 30725000.0 8854.1 10214.0 9405.8 10672.0 11045.0 12133.0 10157.0 10558.0 12231.0 11252.0 11218.0 True False 9752.961713956087 11074.769626036114 10044.134149670173 11331.18520212947 10269.237303181459 12034.192870683335 10543.53019312366 10347.412407409225 11716.973604448222 10541.546799721666 9838.257116761048 0.9913302323986181 1.1256841018282058 1.0209261691848226 1.151747211691081 1.0438065585505147 1.2232037369892639 1.0716867904540803 1.051752590383184 1.19096029564896 1.0714851903760934 1.0 13.26418704415806 -5.249935348449394 23.24864611985428 1.0947942160434392 0.9913300649212665 0.16403620991639611 0.06735710117844483 1052.2994399253776 2126495.404743794 0.01061816851116491 0.2129696578363679 5.624250447548183e-06 5.249935348449394 -0.10346415112217267 TKPLTPS(ph)IGAK ddPTM_A549_PD325901_60min_R1 1 TKPLTPSIGAK 11 1 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YD28;A0A2R8YCQ1;A0A2R8Y7Y0 Q14004 CDK13 Cyclin-dependent kinase 13 1 T(0.016)KPLT(0.176)PS(0.808)IGAK 100.11 7.5683e-05 36663000.0 11153.0 11576.0 12106.0 12608.0 14077.0 13943.0 12448.0 12651.0 14998.0 12544.0 13830.0 True False 12285.244349595345 12551.550145975536 12927.585959291831 13386.767525154452 13088.280083013615 13829.452830786911 12921.715451806975 12398.6658804825 14367.686216949925 11751.96969922756 12128.997675593264 1.012882076341435 1.0348382019424869 1.0658412430324344 1.1036994056064626 1.079089998454751 1.1401975002943079 1.0653572370459652 1.022233346241947 1.1845732517421033 0.9689151579998747 1.0 13.566172712514131 -5.757828742341356 2.2492979976109337 1.0868141867585372 1.015625554441041 0.03752510480514992 0.05948065952185835 0.5475669909985128 5.231254224232682 0.009419940026190404 0.051591932910809477 1.746510728034359e-06 5.757828742341356 -0.07118863231749617 TKPPRPDS(ph)PATTPNISVK ddPTM_A549_MK2206_60min_R1 4 TKPPRPDSPATTPNISVK 18 2 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 T(0.003)KPPRPDS(0.584)PAT(0.327)T(0.086)PNISVK;T(0.001)KPPRPDS(0.999)PATTPNISVK;T(0.004)KPPRPDS(0.996)PATTPNISVK;TKPPRPDS(0.999)PAT(0.001)TPNISVK 167.45 7.6838e-31 128639000.0 10124.900000000001 11005.5 11205.500000000002 8182.7 14501.599999999999 10635.4 9686.0 9845.4 14549.3 14838.2 15207.6 True False 11833.735589961343 11565.632941708824 12794.608395840705 10187.461867335365 12368.433850153364 11760.830968792852 11445.82082238521 11241.01560027296 11253.906780457879 11486.240314422537 11431.133211592016 1.0352198133743258 1.0117660889456188 1.1192773418882063 0.8912031448469627 1.081995426106211 1.0288420886274423 1.0012848779312886 0.9833684370744397 0.9844961625541713 1.0048207908883993 1.0 13.48068081002271 -7.85888756622255 4.217514112026217 0.9918244834044758 1.0276720802575596 0.09048685880125618 0.05278615552280237 0.39467566188094105 12.87170896519682 0.007562257001236823 0.010639262906840813 1.3839246145442876e-08 7.85888756622255 0.03584759685308381 TKPPRPDS(ph)PATTPNISVK ddPTM_A549_PD325901_60min_R1 4 TKPPRPDSPATTPNISVK 18 2 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 T(0.001)KPPRPDS(0.975)PAT(0.02)T(0.004)PNISVK;TKPPRPDS(1)PATTPNISVK;T(0.001)KPPRPDS(0.995)PAT(0.004)TPNISVK;TKPPRPDS(1)PATTPNISVK 168.78 1.1062999999999999e-30 212617000.0 15188.7 14277.0 15712.2 13811.5 18597.4 14911.4 16003.3 16218.099999999999 16713.800000000003 15904.5 17471.9 True False 16730.64564267004 15480.172895135853 16778.52437713408 14664.604986807646 17291.18278154703 14789.966502258907 16612.314338841785 15894.61727264668 16011.377109805146 14900.287155721047 15322.967063499493 1.0918672325886378 1.0102594902791926 1.0949918711958755 0.9570342953839458 1.1284487338445035 0.9652155774379862 1.084144752775304 1.0373067570254655 1.0449266805477575 0.9724152700957439 1.0 13.903408060189342 -10.719713519376437 0.5941386993652974 0.993104367685954 1.045620230159796 0.15581900054619446 0.05166888245740357 2.0676807858851003 1.037047910452915 0.05887520748513314 0.009572179630838002 1.9067180621847087e-11 10.719713519376437 0.0525158624738421 TKPSDEEMLFIY(ph)GHYK ddPTM_A549_MK2206_60min_R1 2 TKPSDEEMLFIYGHYK 16 1 P07108;P07108-6;B8ZWD1;A0A0A0MTI5;P07108-3;P07108-2;P07108-4;P07108-5 P07108 DBI Acyl-CoA-binding protein 1 TKPSDEEMLFIY(0.993)GHY(0.007)K;TKPSDEEMLFIY(0.992)GHY(0.008)K 70.197 0.00048111 4251200.0 1549.08 2072.42 1460.06 1358.5 2171.6 1786.38 1780.9099999999999 1961.48 2691.8 2248.5 2438.4 True False 1810.5268326301791 2177.8973259784834 1667.1184627576802 1691.3325609853816 1852.160516701125 1975.4135458969267 2104.47829452757 2239.5257967805683 2082.111597921312 1740.562288348929 1832.877983583601 0.9878054343204443 1.1882391220174453 0.9095632539042061 0.9227742250897285 1.0105203583054794 1.0777659852919634 1.148182428604954 1.2218630027962356 1.1359793813718113 0.9496334747530883 1.0 10.839895032166705 -7.268414202499895 5.217172186750895 1.086872591603908 1.0039248831693017 0.16467004820048448 0.09560300778811094 0.2887626275126903 26.10423296124121 0.014799871203210725 0.02474434412459363 5.389963168363933e-08 7.268414202499895 -0.0829477084346062 TKPSDEEMLFIY(ph)GHYK ddPTM_A549_PD325901_60min_R1 3 TKPSDEEMLFIYGHYK 16 1 P07108;P07108-6;B8ZWD1;A0A0A0MTI5;P07108-3;P07108-2;P07108-4;P07108-5 P07108 DBI Acyl-CoA-binding protein 1 TKPSDEEMLFIY(0.963)GHY(0.037)K;TKPSDEEMLFIY(0.996)GHY(0.004)K;TKPSDEEMLFIY(0.997)GHY(0.003)K 86.641 3.8626e-05 11504400.0 4042.4 3486.16 3770.4300000000003 4066.92 4677.13 4535.33 5081.3099999999995 5201.3 4285.97 4018.47 4578.25 True False 4452.781472142405 3779.950937879585 4026.3140532374578 4318.124411754535 4348.6245240225535 4498.395776163871 5274.682032649524 5097.555991159089 4105.84558576216 3764.7431184036204 4015.1542739179204 1.108993868820252 0.9414210961789949 1.0027794148264813 1.0754566617289605 1.083052910885847 1.1203544046576352 1.3136934904129045 1.2695791103899425 1.0225872546002435 0.9376334909119313 1.0 11.971239706013735 -4.351887523673314 16.394459800225857 1.0582215755053417 1.0542143460973168 0.0 0.11801659840042694 0.0 0.0 0.016397990989563238 0.0 4.447464357946443e-05 4.351887523673314 -0.004007229408024893 TKPSEDS(ph)LSGQKGDSVSK ddPTM_A549_PD325901_60min_R1 1 TKPSEDSLSGQKGDSVSK 18 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.028)KPS(0.122)EDS(0.543)LS(0.304)GQKGDS(0.002)VSK 59.81399999999999 0.00072642 5489300.0 1509.9 2001.5 1730.6 1432.2 1505.5 2020.8 1850.1 1804.0 1477.9 2065.1 2211.5 True False 1663.1839364703676 2170.1734292648616 1848.0489229432053 1520.6637412378034 1399.758873693045 2004.3432747941042 1920.5065679135648 1768.017804789377 1415.7890025356905 1934.7092335678285 1939.4995198535444 0.8575325332361815 1.1189347597408716 0.9528483529002139 0.7840495579770145 0.7217113793349862 1.0334332410381089 0.9902072922702173 0.9115845540002421 0.7299764645688593 0.9975301430927512 1.0 10.921468703374929 -8.543161568840612 24.98158125799484 0.8697674046622164 0.9246043445702249 0.0 0.12539200138530865 804.9880164790957 991468.8264307354 0.024177395367922697 0.02741602001037072 2.863112619403355e-09 8.543161568840612 0.05483693990800853 TKPSEDSLS(ph)GQKGDSVSK ddPTM_A549_MK2206_60min_R1 2 TKPSEDSLSGQKGDSVSK 18 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.002)KPS(0.005)EDS(0.07)LS(0.871)GQKGDS(0.048)VS(0.003)K;T(0.069)KPS(0.055)EDS(0.115)LS(0.742)GQKGDS(0.019)VS(0.001)K 49.593 0.003878 9400400.0 2540.25 2855.9 3093.1 2409.6 4018.7 3301.3 2609.0 2531.67 4358.1 4627.2 4359.8 True False 2968.982096850269 3001.2531114648336 3531.748090596127 2999.9521081710554 3427.5545535397005 3650.641374774414 3083.0215285569893 2890.541975414209 3370.9973084556304 3581.912306270031 3277.141335641315 0.9059670587168187 0.9158143650455369 1.0776917224123894 0.9154173717027022 1.0458976902407386 1.1139712941492674 0.9407655065184005 0.8820315266776704 1.0286395865181532 1.0929990315993112 1.0 11.678222179035528 -5.646822016771482 9.217894260339449 1.0056510580992013 0.9086802727333754 0.22879631638349496 0.0703126391492641 0.2713066566652317 20.595890783558552 0.008627426566532941 0.033545033140818074 2.2551632372423624e-06 5.646822016771482 -0.09697078536582593 TKPSEDSLS(ph)GQKGDSVSK ddPTM_A549_PD325901_60min_R1 1 TKPSEDSLSGQKGDSVSK 18 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.001)KPS(0.004)EDS(0.117)LS(0.878)GQKGDSVSK 70.453 0.00024363 7028800.0 1464.2 1720.3 1651.8 1695.3 2389.0 1851.4 1726.3 2221.0 2175.0 2065.7 2125.1 True False 1612.84450611293 1865.2757183933743 1763.9010810803104 1800.0148306943481 2221.2048816025826 1836.322812229713 1791.9952911676057 2176.700412659207 2083.5923137662403 1935.2713494654324 1863.7261721188165 0.8653870564468887 1.000831423788397 0.9464378981569928 0.9658150739214888 1.191808600872605 0.9852964666703428 0.9615121137298501 1.1679293048638035 1.1179712690290036 1.0383882452352313 1.0 10.863974192322639 -6.550146343121655 24.99817285128852 1.061397864157045 0.9459210526464651 0.38220666916194346 0.07454426683951731 190.01994386957534 174204.42562398806 0.011103013268115847 0.023113173181854824 2.817433387832778e-07 6.550146343121655 -0.11547681151057987 TKPTQAAGPS(ph)SPQKPPT(ph)PEETK ddPTM_A549_MK2206_60min_R1 1 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 2 TKPTQAAGPS(0.527)S(0.474)PQKPPT(0.971)PEET(0.029)K 82.62 3.4805e-05 59572000.0 1576.3 1644.4 1787.3 1621.6 2979.4 1802.6 1686.2 2168.0 2801.4 2606.7 3168.2 True False 1842.3409031650745 1728.092936199716 2040.7660154286818 2018.89207279639 2541.134206787315 1993.34993553096 1992.5607134736663 2475.320639221541 2166.887372916547 2017.8446595682256 2381.4485021282667 0.7736219790260426 0.7256478293170496 0.8569431644668689 0.847758022477553 1.067054023849913 0.8370325597003385 0.8367011554912663 1.039418083997778 0.9099030993028111 0.8473182005678084 1.0 11.21762363599788 -3.228611898094853 0.2837246718874086 0.971468102700567 1.991214194948635e-13 0.3314714811708529 0.08427311601946696 14.963219158251325 0.34622939161995164 0.028535119958228133 6.40075448601705 0.0005907287418189024 3.228611898094853 -0.9714681027003679 TKPTQAAGPS(ph)SPQKPPT(ph)PEETK ddPTM_A549_PD325901_60min_R1 2 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 2 TKPTQAAGPS(0.532)S(0.468)PQKPPT(0.995)PEET(0.005)K;T(0.005)KPT(0.028)QAAGPS(0.519)S(0.455)PQKPPT(0.991)PEET(0.002)K 113.47 6.8503e-12 129884000.0 4376.2 4146.6 5527.8 4466.8 5229.9 4811.2 4654.0 5116.8 5267.9 4644.5 5294.6 True False 4820.468602411831 4496.048534493968 5902.949749361754 4742.704091161164 4862.569866175528 4772.019182348275 4831.11051676652 5014.741409948051 5046.508482615718 4351.245477364674 4643.397765234713 1.038133893784171 0.9682669376627706 1.2712565340745416 1.0213865645260807 1.0472008025204655 1.0276998490365299 1.0404257315488281 1.0799723959669365 1.0868137380775582 0.9370822180995577 1.0 12.180965155778155 TKPTQAAGPS(ph)SPQKPPTPEETK ddPTM_A549_MK2206_60min_R1 4 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 T(0.007)KPT(0.056)QAAGPS(0.466)S(0.466)PQKPPT(0.004)PEETK;T(0.07)KPT(0.07)QAAGPS(0.406)S(0.406)PQKPPT(0.039)PEET(0.008)K;T(0.001)KPT(0.007)QAAGPS(0.487)S(0.487)PQKPPT(0.017)PEETK;TKPTQAAGPS(0.5)S(0.5)PQKPPTPEETK 82.34200000000001 2.4631999999999997e-05 17196800.0 2610.2400000000002 2522.25 1930.1800000000003 2856.89 3180.91 2432.64 2032.86 2557.4 4587.76 3427.92 3316.63 True False 3050.784697759056 2650.6217515992075 2203.9085478991415 3556.828178250664 2713.0023527259978 2690.0603501442556 2402.2043482339454 2919.919281709028 3548.639685147292 2653.5504912061638 2493.019236668666 1.2237309094476594 1.0632175286144765 0.884031906165372 1.4267150954693508 1.0882396384358781 1.0790371412211357 0.9635723274417757 1.1712381672637286 1.4234305267091378 1.0643923047910413 1.0 11.283678299677387 -8.510365299140664 24.73942557387304 1.2050786141560998 1.1022030494968318 0.01319839432886949 0.164778957711851 1311.4121914242178 2592701.256183138 0.03223889593827678 0.03798934687332911 3.087697177927582e-09 8.510365299140664 -0.10287556465926806 TKPTQAAGPSS(ph)PQKPPT(ph)PEETK ddPTM_A549_MK2206_60min_R1 3 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 2 TKPTQAAGPS(0.337)S(0.662)PQKPPT(0.996)PEET(0.003)K;T(0.009)KPT(0.065)QAAGPS(0.438)S(0.488)PQKPPT(0.999)PEET(0.001)K;T(0.006)KPT(0.05)QAAGPS(0.45)S(0.494)PQKPPT(0.966)PEET(0.034)K 84.641 1.8508e-05 65602700.0 2627.35 2499.27 2641.36 2819.8799999999997 4523.63 4079.76 3589.4399999999996 3489.31 4676.0199999999995 3867.98 4464.3099999999995 True False 3070.78244745972 2626.4721677547236 3015.9445658326536 3510.750726589223 3858.2100194164245 4511.4774952744865 4241.594785536069 3983.930378063708 3616.9089360695493 2994.200631571221 3355.698618312049 0.9150948272596529 0.7826901240242684 0.898753108927793 1.0462056119792924 1.1497486688352079 1.3444227293402786 1.2639975361284486 1.1872134035885695 1.077840815719289 0.8922734047783275 1.0 11.71239743506699 -6.261238455863321 3.039641666109708 1.0966763848088366 0.8479650694310239 0.46508800080806134 0.1211743307850445 0.2019996866180892 3.7837966196460058 0.01847686296249626 0.05156918847219069 5.479760079050744e-07 6.261238455863321 -0.24871131537781266 TKPTQAAGPSS(ph)PQKPPT(ph)PEETK ddPTM_A549_PD325901_60min_R1 2 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 2 TKPTQAAGPS(0.15)S(0.85)PQKPPT(0.993)PEET(0.007)K;T(0.011)KPT(0.079)QAAGPS(0.43)S(0.48)PQKPPT(0.977)PEET(0.023)K 114.98 3.3638000000000003e-15 145332700.0 3490.71 3580.27 3279.0099999999998 4002.7 4780.3 3212.46 3551.3700000000003 4313.5 4351.97 4126.1 4818.5 True False 3845.084309475116 3881.991917858656 3501.54333688894 4249.937688208735 4444.548219139733 3186.298790847718 3686.519328734232 4227.463858624715 4169.071835283344 3865.577341835368 4225.855046988151 0.9098949837892765 0.9186287448797912 0.8285999633102791 1.0056988800971174 1.0517512242421683 0.7540009667673422 0.8723724045768408 1.0003807067726354 0.9865629059507666 0.9147444242297047 1.0 12.045027566232639 -8.273693195214559 23.841515032389367 0.993981864808729 0.9069815882315346 0.13851552053771177 0.07862616945780168 458.2739148121238 891633.8005992443 0.012326412912572084 0.01496259924360489 5.324842968297633e-09 8.273693195214559 -0.08700027657719434 TKPTQAAGPSS(ph)PQKPPTPEETK ddPTM_A549_MK2206_60min_R1 5 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TKPTQAAGPS(0.126)S(0.874)PQKPPTPEETK;TKPTQAAGPS(0.027)S(0.972)PQKPPT(0.001)PEETK;TKPT(0.001)QAAGPS(0.025)S(0.974)PQKPPTPEETK;TKPTQAAGPS(0.139)S(0.86)PQKPPT(0.001)PEETK;TKPTQAAGPS(0.017)S(0.983)PQKPPTPEETK 136.16 8.759e-23 595086100.0 7759.130000000001 8174.06 8508.7 7087.37 10521.7 8534.900000000001 8429.28 8929.8 10872.3 11130.8 11089.3 True False 9068.68145148463 8590.08473976688 9715.361604363017 8823.775968164127 8973.971868011704 9438.057452991907 9960.77106563237 10195.626496365563 8409.741409495451 8616.344549323663 8335.520760889774 1.087956195134783 1.0305396610697102 1.1655374490754615 1.0585752493791682 1.0765940275882389 1.132269683410211 1.1949788563143244 1.2231541122425604 1.0089041405731864 1.0336900112769813 1.0 13.025056618928849 -8.891866788205986 12.453970935777784 1.0039280708763836 1.1188974055326553 0.41948956046885255 0.05568299836722017 0.30769034383011035 33.609088016578404 0.009940206180782708 0.010578236524034074 1.2827239741574288e-09 8.891866788205986 0.11496933465627168 TKPTQAAGPSS(ph)PQKPPTPEETK ddPTM_A549_PD325901_60min_R1 6 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TKPTQAAGPS(0.164)S(0.835)PQKPPT(0.001)PEETK;T(0.001)KPT(0.006)QAAGPS(0.135)S(0.859)PQKPPTPEETK;TKPTQAAGPS(0.03)S(0.969)PQKPPT(0.001)PEETK;TKPTQAAGPS(0.02)S(0.98)PQKPPTPEETK;TKPTQAAGPS(0.172)S(0.827)PQKPPTPEETK;TKPTQAAGPS(0.192)S(0.807)PQKPPT(0.001)PEETK 164.05 1.3686999999999998e-33 1050730000.0 16707.6 16218.800000000001 17695.2 16072.8 21308.600000000002 18743.4 18784.299999999996 19309.4 17978.5 18495.7 20214.8 True False 18403.743252514952 17585.615195883558 18896.102681881774 17065.580352022735 19811.957446679255 18590.75996475446 19499.146815663356 18924.258869068733 17222.926166917863 17327.8783455041 17728.50775217517 1.038087554225027 0.9919399557882089 1.065859741046922 0.962606700495077 1.11751974411092 1.0486364799921468 1.0998752454656506 1.0674479281397415 0.9714819999333968 0.9774019668055867 1.0 14.113783486054547 -8.763480979813744 24.99984460269621 0.9865331645020243 1.0487452654199458 0.32999379519501326 0.04182047060766194 46.59063084457727 570507.2499023821 0.007074893234454744 0.0077165372854608024 1.7239275898122557e-09 8.763480979813744 0.06221210091792151 TKPTQAAGPSSPQKPPT(ph)PEETK ddPTM_A549_MK2206_60min_R1 1 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TKPTQAAGPS(0.001)S(0.005)PQKPPT(0.993)PEET(0.001)K 90.09700000000001 6.367e-07 4390700.0 399.13 657.81 576.42 363.38 684.55 654.82 467.62 386.64 814.91 430.03 827.15 True False 466.4933862083842 691.2897192663191 658.1650235625808 452.4081163127482 583.8536018179019 724.1126177656631 552.5805010286778 441.4474040353398 630.3341861438646 332.8859243311942 621.7458268213479 0.7502959667510983 1.11185260832471 1.0585756995385471 0.7276415808460953 0.9390551196826386 1.1646441142478776 0.8887562685442132 0.7100126530679313 1.013813296289296 0.5354051607118313 1.0 9.280181108832345 TKPTQAAGPSSPQKPPT(ph)PEETK ddPTM_A549_PD325901_60min_R1 1 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TKPTQAAGPS(0.002)S(0.01)PQKPPT(0.985)PEET(0.003)K 99.61399999999999 3.8957e-08 3068100.0 341.68 760.28 339.8 410.86 906.83 608.13 736.5 612.56 620.82 614.99 696.19 True False 376.3671020684783 824.3514638028919 362.8608713833936 436.2378890692389 843.1373891936668 603.1775909048587 764.5279105282636 600.342010255976 594.7290943597046 576.1594264451502 610.5630435120229 0.6164262741871422 1.3501496242896318 0.5943053305293089 0.7144845953334362 1.3809178235614323 0.9879038656439435 1.252168664075406 0.9832596594820833 0.9740666433702903 0.9436526376228416 1.0 9.253996457741463 TKPTQAAGPSSPQKPPTPEETK ddPTM_A549_MK2206_60min_R1 2 TKPTQAAGPSSPQKPPTPEETK 22 2 F5H8D7;P18887 F5H8D7 XRCC1 DNA repair protein XRCC1 0 ; 55.126999999999995 0.002082 3140800.0 544.86 845.62 710.4200000000001 772.96 1318.1999999999998 909.96 804.61 679.76 1159.07 1438.49 1086.56 False True 636.8190474519583 888.6584460649508 811.1682385054802 962.3352346994935 1124.294526208981 1006.2513632174384 950.7972219594639 776.1180616776921 896.5424956544518 1113.534109925307 816.7371644695687 0.7797111177933742 1.0880592738082286 0.9931814955822351 1.178267962526823 1.376568344283875 1.2320381721223008 1.1641410031548651 0.9502666162886604 1.0977123787879945 1.3633934616511463 1.0 9.673728066770039 -2.6348832084491525 16.45994911825496 1.0739418231231903 0.10993315422408734 0.0 0.17425179888223521 0.0 0.0 0.020026696711364228 0.0 0.0023180179332977792 2.6348832084491525 -0.964008668899103 TKPYIQVDIGGGQTK ddPTM_A549_PD325901_60min_R1 2 TKPYIQVDIGGGQTK 15 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 131.48 2.4306e-09 7586700.0 5089.6 5156.3 6053.0 6371.4 7430.6 6108.6 6281.8 6734.6 7128.9 6734.9 6628.1 False True 5606.292445234513 5590.8394970364225 6463.792979645916 6764.946907500722 6908.700290178377 6058.853586899874 6520.857336532859 6600.273119808507 6829.297124417544 6309.657264614778 5812.88571898769 0.9644594296635932 0.9618010343423823 1.1119766140476577 1.1637846045042897 1.1885147281687007 1.0423142445599325 1.121793486362994 1.1354555102036206 1.1748548749392689 1.0854604011918543 1.0 12.505038830205839 -5.7591424927503505 24.999001516188176 1.1015128015180005 0.9631301734488977 0.5235377129902364 0.05441391179627246 47.906126108399484 521366.6315806348 0.010085442886116184 0.03564970075096702 1.7412354773684369e-06 5.7591424927503505 -0.13838262806910273 TKQDRT(ph)PLTK ddPTM_A549_MK2206_60min_R1 2 TKQDRTPLTK 10 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 T(0.093)KQDRT(0.906)PLTK;T(0.093)KQDRT(0.906)PLTK 61.641000000000005 0.0025632 21645000.0 6937.1 8407.3 7381.8 6994.6 5711.2 4309.5 3791.8999999999996 4090.2 5787.1 13027.9 13197.5 True False 8107.912884188562 8835.195659518291 8428.650239294713 8708.277313999522 4871.090045580892 4765.528429585422 4480.839146851378 4669.9983757121545 4476.3310900997185 10084.888341730491 9920.196517529766 0.817313736664515 0.8906270802101356 0.8496454908328304 0.8778331456046574 0.49102757561035143 0.4803864944776405 0.45168854658608665 0.4707566394939758 0.4512341143836909 1.016601669524359 1.0 13.276152985118737 -4.072623449659691 22.243036677716038 0.7003237523407403 0.9003589758019109 0.0 0.22609121513872135 0.0 0.0 0.034096674979510376 0.0 8.460120528682564e-05 4.072623449659691 0.20003522346117064 TKQDRT(ph)PLTK ddPTM_A549_PD325901_60min_R1 3 TKQDRTPLTK 10 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 T(0.014)KQDRT(0.986)PLTK;T(0.074)KQDRT(0.926)PLTK;T(0.001)KQDRT(0.999)PLTK 70.332 0.001094 35729500.0 9264.300000000001 8276.1 8462.5 8597.8 10383.099999999999 9212.4 9803.599999999999 9863.3 10462.0 10267.0 10665.400000000001 True False 10204.804915982799 8973.555991975474 9036.816139146466 9128.866578979454 9653.826875750423 9137.37726876148 10176.68136273576 9666.568743890834 10022.318522585017 9618.739867822822 9353.623413541023 1.0910001894249388 0.9593668245168675 0.9661299947209845 0.9759711477975269 1.0320948844032787 0.9768810293916165 1.0879934879571072 1.0334571231397627 1.0714904887100694 1.028343716927709 1.0 13.191309630208167 -7.730237519803598 24.999818336388742 1.038287255336109 0.9971770500082985 0.21497878726489228 0.04094173484015242 275.0630575789922 220387.81958740336 0.006623057999691092 0.009823148756197954 1.8610690218417726e-08 7.730237519803598 -0.04111020532781062 TKS(ph)DES(ph)GEEKNGDEDCQR ddPTM_A549_MK2206_60min_R1 3 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 2 T(0.256)KS(0.744)DES(1)GEEKNGDEDCQR;T(0.113)KS(0.887)DES(1)GEEKNGDEDCQR;T(0.202)KS(0.799)DES(1)GEEKNGDEDCQR 124.81 3.4539e-11 166400000.0 8161.200000000001 8683.0 8885.3 7765.700000000001 9974.3 8338.9 8113.299999999999 7371.6 9980.3 12182.199999999999 12235.3 True False 9538.611037816918 9124.92761190838 10145.369147254774 9668.296848615519 8507.09368287531 9221.316863086175 9587.381589743742 8416.546874578189 7719.77798526416 9430.232559094651 9196.937332898799 1.037150813640526 0.9921702499012548 1.1031247446868313 1.0512517916187814 0.924992024512789 1.0026508313914642 1.042453725921157 0.9151467026388189 0.8393857330797915 1.0253666212730754 1.0 13.166937794716803 -8.267103186827232 24.37250460567331 0.9213595800296254 1.0205989310093206 0.23197275761312186 0.062182139496508054 306.73408702488035 1319936.9919396886 0.011510642618881822 0.014118220087397037 5.406258569001738e-09 8.267103186827232 0.09923935097969527 TKS(ph)DES(ph)GEEKNGDEDCQR ddPTM_A549_PD325901_60min_R1 4 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 2 T(0.056)KS(0.944)DES(1)GEEKNGDEDCQR;T(0.013)KS(0.987)DES(1)GEEKNGDEDCQR;T(0.13)KS(0.87)DES(1)GEEKNGDEDCQR;T(0.174)KS(0.826)DES(1)GEEKNGDEDCQR 174.99 5.192399999999999e-31 407298000.0 29732.7 30239.1 34276.399999999994 31476.199999999997 32032.5 30053.199999999997 33973.7 33167.899999999994 27348.3 32500.2 33919.0 True False 32751.14181594313 32787.45508113069 36602.60262473736 33420.41338636314 29782.647706125856 29808.45670330668 35266.587744622 32506.3402147858 26198.946057275083 30448.131825481163 29747.17803025654 1.1009831514986461 1.102203881248225 1.2304563003424396 1.1234818090095966 1.0011923711161186 1.0020599827313978 1.185543976936284 1.0927537456401026 0.8807203839849123 1.0235637072703727 1.0 14.860465193016829 -8.70492758248832 8.403402155118256 0.943739674836192 1.1057175851596992 0.40398362800295595 0.07236161532585408 0.17261867981384227 23.24231108708686 0.013140305141548726 0.014879219787963043 1.9727516600641055e-09 8.70492758248832 0.16197791032350717 TKS(ph)DESGEEKNGDEDCQR ddPTM_A549_MK2206_60min_R1 1 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 T(0.042)KS(0.957)DESGEEKNGDEDCQR 151.06 9.7379e-18 13623000.0 2400.8 2416.9 2245.7 1803.6 2900.1 2052.4 1862.8 1720.2 3301.1 3658.8 3458.0 True False 2805.9963460754375 2539.909886585439 2564.174028337822 2245.4820809666808 2473.4991317392382 2269.5836057271404 2201.24664752624 1964.043617891557 2553.4061207734753 2832.274538853041 2599.2831640551553 1.0795269960883322 0.9771578263227436 0.9864927622342772 0.863885132646915 0.95160818411193 0.8731575063127601 0.8468668123453174 0.7556097177298076 0.9823501171722642 1.089636780640088 1.0 11.343898093203027 -4.134890600430275 15.733436405870494 0.9549999244732473 0.9387359441931404 0.0 0.09739829239331664 0.0 0.0 0.012497851567875291 0.0 7.330091562238605e-05 4.134890600430275 -0.016263980280106893 TKS(ph)DESGEEKNGDEDCQR ddPTM_A549_PD325901_60min_R1 1 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 T(0.009)KS(0.966)DES(0.026)GEEKNGDEDCQR 159.98 3.1545000000000006e-23 23273000.0 3226.6 3319.4 4388.4 3404.9 3401.2 3541.9 4027.5 4928.1 2899.4 3869.0 4668.3 True False 3554.162056702621 3599.137487435311 4686.223213592948 3615.2129399110436 3162.3114455030145 3513.0559407132046 4180.768716432562 4829.8051794803405 2777.5483009350996 3624.7106797123292 4094.1286947919048 0.8681119529104766 0.8790973014633696 1.144620397388641 0.8830237663290642 0.7724015733862386 0.858071693052083 1.0211620171468647 1.1796906105136074 0.6784223232817248 0.885343610307923 1.0 11.999340737394663 TKS(ph)DLSLK ddPTM_A549_MK2206_60min_R1 1 TKSDLSLK 8 1 B7Z3R2;Q9ULQ1;Q9ULQ1-3 B7Z3R2 TPCN1 Two pore calcium channel protein 1 1 T(0.019)KS(0.978)DLS(0.002)LK 75.695 0.001336 7650100.0 3290.9 3385.9 4340.2 3584.7 4929.9 4175.3 3986.8 3952.3 5499.9 5582.9 5886.5 True False 3846.3234652197793 3558.2278476518 4955.705623098285 4462.951660923297 4204.7182405990425 4617.127474660169 4711.149954024916 4512.550628411118 4254.181431535557 4321.719012507558 4424.7195908648555 0.8692807275653771 0.8041702473074251 1.1200044480399816 1.0086405633788351 0.9502790299480172 1.0434847632361954 1.0647341277290014 1.0198500799299453 0.9614578605881858 0.9767215580011105 1.0 12.111370314391712 -5.7407725353808265 24.999995692241445 1.0002368256994614 0.8367253780097439 0.6469406390751535 0.05000202145695915 119.59997936793067 144673.853752883 0.006961278511409622 0.026900328566759273 1.8164668002194173e-06 5.7407725353808265 -0.16351144768971748 TKS(ph)DLSLK ddPTM_A549_PD325901_60min_R1 2 TKSDLSLK 8 1 B7Z3R2;Q9ULQ1;Q9ULQ1-3 B7Z3R2 TPCN1 Two pore calcium channel protein 1 1 T(0.019)KS(0.981)DLSLK;T(0.006)KS(0.882)DLS(0.112)LK 96.64 0.00069146 39662000.0 13272.0 13764.900000000001 13692.199999999999 14179.7 17157.2 14915.400000000001 14320.3 14875.4 16889.1 17103.0 15651.5 True False 14619.363669670003 14924.91643092075 14621.43502988729 15055.547864564774 15952.137461126747 14793.933927585102 14865.266852868834 14578.698477474452 16179.309860427322 16023.11366118376 13726.46472303312 1.065049447520059 1.0873095682005156 1.06520035019304 1.09682632552149 1.1621446441601917 1.0777672347608018 1.0829639789132883 1.062086908146952 1.1786946010416148 1.167315400177064 1.0 13.744672484037283 -6.266380364088855 22.89870712086223 1.09012201437217 1.0739987697155242 0.022570139990981453 0.05088546143706491 705.0195826531766 3267418.910155237 0.009217079979533858 0.022077487220278302 5.415264026261732e-07 6.266380364088855 -0.01612324465664572 TKS(ph)DTEPQK ddPTM_A549_MK2206_60min_R1 1 TKSDTEPQK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 T(0.128)KS(0.872)DTEPQK 94.191 0.00026633 20116000.0 9830.2 7460.9 4733.4 3181.7 2749.0 1878.2 2155.6 2209.7 2660.9 6786.1 6443.7 True False 11489.297434684582 7840.627941919522 5404.667295602377 3961.216642831941 2344.625741578281 2076.949877351744 2547.2446174616525 2522.9317419224367 2058.21039858415 5253.115296848867 4843.551452927183 2.372081218986755 1.618776639026115 1.1158480193982632 0.81783308824726 0.48407160827440265 0.42880722906258106 0.5259043167430861 0.5208846786169087 0.42493827485620655 1.0845585822514934 1.0 12.241849552130246 -5.499337598494028 1.2062755784359493 0.6548002084705243 2.7528870322337315 0.8646677042918338 0.21229503847287617 0.29860424267384444 0.47772315465668547 0.03623843337609591 0.6982093464184611 3.167104559514453e-06 5.499337598494028 2.0980868237632073 up TKS(ph)ENGLEFTSSGSANTETTK ddPTM_A549_MK2206_60min_R1 1 TKSENGLEFTSSGSANTETTK 21 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 T(0.173)KS(0.826)ENGLEFTSSGSANTETTK 169.26 1.523e-35 5494900.0 1182.1 1365.5 1158.8 1139.6 1611.5 1307.7 1536.4 1272.4 1954.7 1937.0 1787.8 True False 1381.6095804297622 1434.9981174779323 1323.135264745011 1418.8020511585887 1374.4504847411413 1446.0799460189944 1815.5439925162739 1452.7665965615743 1511.9635710144833 1499.4303546950741 1343.839919230135 1.0281057741023685 1.067834119930014 0.9845929160245624 1.055782039851442 1.0227784314731048 1.0760805102794024 1.351012100873124 1.081056289348691 1.1251069040132873 1.115780483403168 1.0 10.39214557643371 -7.324397436180848 6.604533116776847 1.087811372359468 1.0325842538165289 0.15583848810561862 0.08712432894346935 0.5694768480489566 49.36447172840688 0.014778053751709973 0.02375436295256485 4.738081904154125e-08 7.324397436180848 -0.05522711854293916 TKS(ph)FLNYYADLETSAR ddPTM_A549_PD325901_60min_R1 1 TKSFLNYYADLETSAR 16 1 H0YAJ5;G5E9Y1;Q92870-2;Q92870;Q92870-4 H0YAJ5 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 T(0.197)KS(0.803)FLNYYADLETSAR 85.805 1.5686e-05 5399800.0 2700.3 2419.8 2452.5 3334.2 3749.0 3049.0 3265.8 2652.5 3583.2 2858.5 3479.3 True False 2974.4324681442035 2623.7250382888396 2618.9413980805552 3540.1459614823916 3485.683173347878 3024.169954892727 3390.0818061143327 2599.5938066540048 3432.610564913655 2678.013822165339 3051.368157099903 0.9747864941250416 0.8598520084126767 0.8582843050212804 1.1601831634918272 1.1423345181201467 0.9910865550117606 1.1110038617353706 0.8519436766767351 1.1249414650037164 0.8776436287880093 1.0 11.575240540743604 -6.245585084979982 24.95642297284846 1.0556244708415388 0.8938620312640259 0.23352816118691166 0.10256544831811264 625.2483261018122 984208.7896656407 0.012253174029455891 0.032299164726426376 5.680870836448485e-07 6.245585084979982 -0.1617624395775129 TKS(ph)HDDGNIDLESDSFLK ddPTM_A549_PD325901_60min_R1 1 TKSHDDGNIDLESDSFLK 18 1 P18583-5;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-9;P18583-6;P18583-2;P18583-8 P18583-5 SON Protein SON 1 T(0.166)KS(0.834)HDDGNIDLESDSFLK 180.9 4.0431e-40 6867100.0 4045.7 3831.0 4065.6 5193.0 5189.7 5278.2 4345.6 5193.4 4143.1 4589.9 4849.8 True False 4456.416485713072 4153.851814895668 4341.516064438862 5513.7598158412975 4825.193375493061 5235.216089181631 4510.974186003562 5089.813562856516 3968.9799150183535 4300.092930682766 4253.305345415201 1.0477537171218643 0.976617354635322 1.020739333732234 1.2963470449599364 1.1344573181641706 1.2308582770397307 1.0605808470501916 1.1966725051477949 0.9331518884005511 1.0110002883564422 1.0 12.054368714632437 -8.77105255775887 24.998927857425045 0.9684328283854399 1.1203893144704846 0.3104176701040954 0.0917943753725812 161.85021493484993 420887.7958246572 0.016428969173959813 0.017598419544404106 1.6941327662756023e-09 8.77105255775887 0.15195648608504475 TKS(ph)KGSLEITESQSADAEPPPPPKPDLSR ddPTM_A549_PD325901_60min_R1 2 TKSKGSLEITESQSADAEPPPPPKPDLSR 29 3 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 T(0.147)KS(0.706)KGS(0.147)LEITESQSADAEPPPPPKPDLSR;T(0.158)KS(0.684)KGS(0.158)LEITESQSADAEPPPPPKPDLSR 174.06 9.2073e-58 28336000.0 2468.7 2664.8 2878.1000000000004 3428.6 3301.8 3434.9 3192.2 3712.1 3769.5 3334.1000000000004 3432.6000000000004 True False 2719.320606639113 2889.3720481164137 3073.425173421264 3640.376835084435 3069.8929585916308 3406.9273132374656 3313.6809178388653 3638.0592534138846 3611.0810237893534 3123.584356998936 3010.4119610442103 0.903305142893424 0.959792907251866 1.0209317572453427 1.209262015362745 1.019758424533627 1.1317146481359706 1.1007400185486444 1.2084921600404366 1.1995305195827055 1.0375936574193885 1.0 11.55574521134398 -5.880689325840245 2.8215091673988852 1.108451787277683 0.9240407934517965 0.49534165410756537 0.0713229300641636 0.20195278316408058 3.170411086935584 0.012030142207410246 0.04793858233616805 1.3161660197287038e-06 5.880689325840245 -0.18441099382588644 TKS(ph)LEITGER ddPTM_A549_PD325901_60min_R1 1 TKSLEITGER 10 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.021)KS(0.979)LEITGER 69.26100000000001 0.0010292 6843500.0 2219.3 1934.9 2875.4 2553.5 3235.0 3176.8 2861.6 2874.8 3085.2 3333.7 3349.7 True False 2444.601702237691 2097.96081353214 3070.5419351848427 2711.2238955807343 3007.784760144139 3150.9291940646813 2970.4997539276046 2817.4598587630294 2955.5397730720047 3123.209613067197 2937.708135497814 0.8321458734100681 0.714148825127118 1.04521681309383 0.9229044447335132 1.0238541820406029 1.0725807495953765 1.0111623132446526 0.9590673167011509 1.0060699146245067 1.0631449650589433 1.0 11.52047535435268 -5.764034894959048 24.99999985205115 1.0033864217159647 0.7731473151946375 0.7803538553801643 0.04862660696159784 17.262964305107612 166285.50713494455 0.005649432188734725 0.018823495452583463 1.7217302307930142e-06 5.764034894959048 -0.23023910652132717 TKS(ph)LIAQDHR ddPTM_A549_MK2206_60min_R1 3 TKSLIAQDHR 10 1 O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39;H0YAN8 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 T(0.197)KS(0.803)LIAQDHR;T(0.007)KS(0.993)LIAQDHR;T(0.013)KS(0.987)LIAQDHR 112.15 3.9476e-05 130520000.0 6085.889999999999 7794.3099999999995 7274.17 6418.0 8749.81 7074.15 5528.02 6988.34 9641.48 10091.59 10393.42 True False 7113.039446275008 8191.007086810275 8305.756686874538 7990.410288114964 7462.7245398032155 7822.7318575592735 6532.389678150101 7978.958595893666 7457.700174279804 7811.892810086358 7812.446970200733 0.9104752292599877 1.0484560238365133 1.0631440723444847 1.0227794593157613 0.955235225054138 1.0013164745178778 0.8361515544446964 1.0213136327616767 0.9545921019017408 0.9999290670238802 1.0 12.9315587765449 -6.753514782539153 24.807026986908294 0.9708363490653107 1.017583184330973 0.10963173855313235 0.0590448270549297 265.78712899518575 832008.7030739568 0.008001588383351032 0.016416955130967952 1.7639457221743033e-07 6.753514782539153 0.04674683526566237 TKS(ph)LIAQDHR ddPTM_A549_PD325901_60min_R1 7 TKSLIAQDHR 10 1 O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39;H0YAN8 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 T(0.044)KS(0.956)LIAQDHR;T(0.025)KS(0.975)LIAQDHR;T(0.023)KS(0.977)LIAQDHR;T(0.046)KS(0.954)LIAQDHR;T(0.201)KS(0.799)LIAQDHR;T(0.037)KS(0.963)LIAQDHR;T(0.04)KS(0.96)LIAQDHR 108.32 0.0001024 305687000.0 26148.489999999998 31073.76 33801.939999999995 31413.179999999997 37965.4 35008.21 34268.17 32509.86 33149.47 34465.100000000006 36514.65 True False 28803.06545529908 33692.45480857018 36095.94291597758 33353.50078409198 35298.84127751973 34723.11474469504 35572.26396161213 31861.425338808196 31756.31305628719 32288.967704149254 32023.57953543759 0.8994330388152062 1.0521139515738958 1.1271676508253388 1.0415294376190107 1.1022765658803915 1.0842983591596973 1.1108147333201004 0.99493641251285 0.9916540723108532 1.0082872737077373 1.0 14.966846958152923 -8.293874405132525 22.051034846131056 0.9958645342887534 1.0638571947917286 0.20540392527010243 0.057183014232713145 163.28105487171342 111006.36989400438 0.009063270426776206 0.01095788863504898 5.083064198993455e-09 8.293874405132525 0.06799266050297514 TKS(ph)LLEEK ddPTM_A549_PD325901_60min_R1 1 TKSLLEEK 8 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.092)KS(0.908)LLEEK 54.143 0.0065714 2548300.0 1140.1 1340.3 1674.9 1345.6 1539.0 1494.3 1292.5 1501.5 1746.0 1751.6 1780.3 True False 1255.84211270274 1453.2517847832592 1788.5687859918949 1428.7146559206726 1430.905949261771 1482.1309162335867 1341.6867947831388 1471.551404596036 1672.621691878556 1641.0036770700729 1561.3343862515321 0.8043389832192057 0.9307754940773714 1.1455385865713938 0.9150600079658436 0.9164634826861816 0.9492719364183748 0.8593205956376035 0.9424959941662158 1.071277047765664 1.0510264114593746 1.0 10.608563832691685 -8.73140300897143 13.955942864728815 1.0336564478717403 0.9368649035644737 0.26099902343096115 0.08038831755433327 1.9938608248332916 925.0285026153526 0.013896735670811762 0.0157361375028181 1.8560812819616429e-09 8.73140300897143 -0.09679154430726655 TKS(ph)PKPAESPQSATK ddPTM_A549_MK2206_60min_R1 1 TKSPKPAESPQSATK 15 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 T(0.387)KS(0.612)PKPAES(0.001)PQSATK 131.11 5.1409e-10 46413000.0 1098.9 1339.0 1224.8 1076.1 1372.3 1071.2 1540.0 1210.5 1596.2 1701.0 1473.9 True False 1284.3674544744658 1407.149380668585 1398.4950571795719 1339.7445483079653 1170.4364878748174 1184.5536729949877 1819.7980659171196 1382.0920820007743 1234.6632486076217 1316.7429186041925 1107.889952429408 1.159291544848903 1.2701165649015536 1.2623050277808894 1.20927583589881 1.0564555489543488 1.069197956347081 1.642580169561627 1.2474994280524787 1.1144276973540759 1.1885141802367705 1.0 10.113598869145557 -9.0516794390447 2.25994873337023 1.0421749371421392 1.2404038266898991 0.11639670262440927 0.1536259067919874 0.2901846329306438 3.0243902218217995 0.029535293864320623 0.029043951687774672 8.878110803667619e-10 9.0516794390447 0.19822888954775997 TKS(ph)PPQPPRPDYR ddPTM_A549_MK2206_60min_R1 2 TKSPPQPPRPDYR 13 2 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 T(0.136)KS(0.848)PPQPPRPDY(0.016)R;T(0.14)KS(0.844)PPQPPRPDY(0.015)R 52.522 0.0049082 20268400.0 2921.8 2930.0 2909.7 2970.3 3792.7 2958.8 2828.16 2791.9 3789.4 4510.200000000001 4327.9 True False 3414.9284088483855 3079.124484958142 3322.3392128309956 3698.023633341833 3234.798854159311 3271.8982521075177 3342.0000637040016 3187.660374835158 2931.106950428344 3491.3426875300615 3253.162986036528 1.0497255819970286 0.9465017578813583 1.0212642978822122 1.1367471132601623 0.9943549917553959 1.0057590923514765 1.027307908656525 0.9798649463668052 0.9010021824942258 1.0732148074092405 1.0 11.667627389013528 -8.4045934821996 4.037009455655142 0.9527598676749254 1.0248604785822346 0.0 0.06040264275487741 0.2427151197349529 6.838989040774362 0.009199633500638692 0.01114082980752554 3.939186272505551e-09 8.4045934821996 0.07210061090730924 TKS(ph)PTDDEVTPSAVVR ddPTM_A549_MK2206_60min_R1 4 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 T(0.024)KS(0.971)PT(0.005)DDEVTPSAVVR;TKS(0.495)PT(0.495)DDEVT(0.009)PSAVVR;T(0.072)KS(0.923)PT(0.005)DDEVTPSAVVR;T(0.025)KS(0.714)PT(0.261)DDEVTPSAVVR 229.15 1.2172e-55 342055000.0 24435.199999999997 27187.2 27061.6 23826.3 33059.6 27949.8 25368.3 25473.8 39231.4 38254.4 38792.200000000004 True False 28559.26437671714 28570.91235407986 30899.34180222953 29663.74456960324 28196.576633787314 30907.42928442431 29977.391737406 29084.78916024066 30345.550539672375 29612.704471165336 29159.026129745656 0.9794313517070212 0.9798308155749464 1.0596836007053247 1.0173091665548704 0.9669930850339158 1.059960958466136 1.0280656015059952 0.9974540655379 1.0406914965077083 1.0155587617844641 1.0 14.831654916043908 -7.257180987645401 24.94939280391489 1.021133509613639 1.0036982057463144 0.1334588851719941 0.028287453955318557 885.1701863157967 5186089.038485602 0.00440999459720418 0.007456256781643166 5.531195544371493e-08 7.257180987645401 -0.017435303867324503 TKS(ph)PTDDEVTPSAVVR ddPTM_A549_PD325901_60min_R1 3 TKSPTDDEVTPSAVVR 16 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 T(0.008)KS(0.956)PT(0.036)DDEVTPSAVVR;TKS(0.48)PT(0.48)DDEVT(0.041)PSAVVR;T(0.001)KS(0.898)PT(0.1)DDEVTPSAVVR 201.75 1.5245999999999996e-39 340989000.0 16931.9 17036.9 17721.3 18158.0 20972.7 18562.199999999997 18153.7 18277.0 19745.6 20265.9 21274.1 True False 18650.814023394025 18472.65935400575 18923.973984833814 19279.578420189926 19499.64990388717 18411.035597477785 18844.5489875858 17912.450896970877 18915.761099173655 18986.307615399866 18657.52056763115 0.9996405447222844 0.990091866014281 1.0142812876039347 1.033340863825067 1.0451361869442088 0.9867889750269931 1.0100242912383077 0.960065986905415 1.0138410959058797 1.0176222261997196 1.0 14.18746965606851 TKS(ph)RT(ph)PPR ddPTM_A549_MK2206_60min_R1 1 TKSRTPPR 8 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 T(0.085)KS(0.929)RT(0.986)PPR 44.188 0.030587 12185000.0 1410.2 1065.7 834.61 736.81 964.89 700.13 611.54 593.28 880.9 1628.8 1912.0 True False 1648.2072839201849 1119.9395780272664 952.9702479365147 917.3284830766577 822.955959182054 774.2172918913191 722.648902098023 677.379256843799 681.3775565082409 1260.8529487492717 1437.1976314845156 1.1468202060823829 0.7792523126206757 0.6630752981078665 0.6382758104945715 0.5726115470507722 0.5386992539721984 0.502818044134669 0.47131949149131136 0.47410150252225913 0.8772996288943969 1.0 10.489042747541493 -5.264266062087885 2.489807832128244 0.6737369724895258 1.2502215309073212 0.4427168587866428 0.1618205032766191 0.5370172997056402 4.111147869092765 0.030780172964268607 0.6525514368356218 5.441691760164214e-06 5.264266062087885 0.5764845584177954 TKS(ph)SDDLLAGMAGGVTVTNGVK ddPTM_A549_PD325901_60min_R1 1 TKSSDDLLAGMAGGVTVTNGVK 22 1 Q69YQ0-2;Q69YQ0;F8WAN1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.163)KS(0.675)S(0.163)DDLLAGMAGGVTVTNGVK 194.73 8.348099999999999e-61 10394000.0 2871.1 3105.6 3380.7 3090.3 3487.5 3298.8 3250.4 3435.8 2993.5 3890.3 3356.1 True False 3162.571958407892 3367.3198111041497 3610.134631800587 3281.1808124194804 3242.550031221851 3271.9356665136534 3374.095750687127 3367.2702736670444 2867.693605176663 3644.665794077249 2943.3209760707555 1.0744910202181992 1.144054569134835 1.2265514570619505 1.1147886482974607 1.101663752470027 1.111647588935947 1.1463567100287657 1.1440377386778415 0.9743054286267301 1.2382834980311144 1.0 11.523229164804865 -8.760479397776395 24.99968279360703 0.9878664457729156 1.1345279159653046 0.0 0.08389761517831706 8.580090411799269 223441.11785385062 0.006426374688835841 0.007085126841558829 1.7358836084122882e-09 8.760479397776395 0.14666147019238895 TKS(ph)SSEEVLER ddPTM_A549_MK2206_60min_R1 2 TKSSSEEVLER 11 1 A0A087WXD1;Q96T83 A0A087WXD1 SLC9A7 Sodium/hydrogen exchanger;Sodium/hydrogen exchanger 7 1 T(0.024)KS(0.947)S(0.024)S(0.005)EEVLER;T(0.113)KS(0.87)S(0.015)S(0.002)EEVLER 79.02199999999999 0.00027899 21492000.0 2877.1 2955.3 2603.1000000000004 2290.7799999999997 2857.6 2245.3 1873.88 2072.3 2870.5 3125.8 2761.6 True False 3362.684141658461 3105.712146893106 2972.2587225213456 2852.0212028370224 2437.250825439831 2482.8961556904856 2214.339740104398 2366.0548711525857 2220.336333246573 2419.679609037616 2075.818503717384 1.6199316730420088 1.4961385792309803 1.4318490355484417 1.373926091192275 1.1741155698704837 1.196104645586358 1.0667308997096565 1.139817795686591 1.0696196846065231 1.1656508527621487 1.0 11.019464593852337 -5.655844568269417 0.36781311379533416 1.0131093226769665 1.9624229565418907 0.9079556563369144 0.05802566267727338 0.5042762260996245 0.05612758312421714 0.010279674568344646 0.20073958397603286 2.208795107826983e-06 5.655844568269417 0.9493136338649242 TKS(ph)TGGAPTFNVTVTK ddPTM_A549_MK2206_60min_R1 1 TKSTGGAPTFNVTVTK 16 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 T(0.11)KS(0.788)T(0.102)GGAPTFNVTVTK 131.09 1.2003e-10 5378800.0 2489.8 2976.9 2864.7 3008.9 3901.1 2643.1 3248.5 2829.7 4253.7 3730.6 3337.1 True False 2910.0173702343477 3128.4114946320456 3270.9575361710645 3746.080635074652 3327.2533577559225 2922.7910876522164 3838.7104007349094 3230.818640592805 3290.2437417630895 2887.8548689857753 2508.4059707254087 1.1601062205225083 1.2471711242687469 1.3039984652983156 1.493410826952911 1.3264413322990578 1.1651985849830246 1.530338567813562 1.287996711177689 1.311687095375387 1.1512709277081785 1.0 11.292555143389894 -10.523815858330396 0.7285112856899127 0.9883588523208533 1.3204705316263357 0.3581050510306143 0.11701972885316161 0.4540137697542816 0.4115191828106076 0.08676692739034811 0.021588452102072567 2.993533631399051e-11 10.523815858330396 0.33211167930548235 TKS(ph)TGGAPTFNVTVTK ddPTM_A549_PD325901_60min_R1 2 TKSTGGAPTFNVTVTK 16 1 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 T(0.243)KS(0.519)T(0.219)GGAPT(0.019)FNVTVTK;T(0.204)KS(0.67)T(0.125)GGAPTFNVTVTK 128.75 1.4974000000000002e-10 26802000.0 11770.8 11754.3 11737.9 11918.2 13741.900000000001 11974.400000000001 12296.3 12446.3 14245.9 14675.3 12634.8 True False 12965.762950795024 12744.876112719428 12534.504479726715 12654.36014580392 12776.716350981385 11876.88445649967 12764.242425293549 12198.04878256654 13647.194364451727 13748.699053497632 11080.799698596224 1.1701107594641926 1.1501765630087166 1.1311913237917885 1.142007841492437 1.1530500233299958 1.0718436195543088 1.1519242990116132 1.1008274776514422 1.2316073510633558 1.2407677629295468 1.0 13.435774383641071 -11.0304162917049 1.3234324575923173 1.0000165123369276 1.1516343484053395 0.0 0.08017070453299249 0.23359081318254635 0.729129843338154 0.031528071706146805 0.007092530651171245 9.32360161223527e-12 11.0304162917049 0.15161783606841195 TKSDES(ph)GEEKNGDEDCQR ddPTM_A549_MK2206_60min_R1 8 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 T(0.007)KS(0.007)DES(0.985)GEEKNGDEDCQR;T(0.001)KS(0.001)DES(0.998)GEEKNGDEDCQR;T(0.002)KS(0.007)DES(0.991)GEEKNGDEDCQR;T(0.002)KS(0.002)DES(0.996)GEEKNGDEDCQR;TKS(0.001)DES(0.998)GEEKNGDEDCQR;T(0.002)KS(0.002)DES(0.996)GEEKNGDEDCQR;T(0.005)KS(0.005)DES(0.991)GEEKNGDEDCQR;T(0.001)KSDES(0.999)GEEKNGDEDCQR 131.43 3.0404e-13 169255400.0 13238.169999999998 15561.799999999997 14992.640000000001 10851.97 15695.560000000001 12424.75 10524.54 10575.15 16578.8 19975.07 21520.800000000003 True False 15472.449453817668 16353.829150178031 17118.821794638112 13510.703137163442 13386.763915782602 13739.528798118437 12436.712686147635 12074.2098975386 12823.728270903432 15462.687813711374 16176.591416135974 0.9564715492773136 1.0109564326305025 1.058246533788464 0.8352008646077729 0.8275392245136048 0.8493463452636509 0.7688092235390299 0.7464001276248287 0.7927336446237927 0.9558681069417079 1.0 13.98162002779379 -6.265833717753258 24.92406011722142 0.8668426397764885 1.0087979995809022 0.4594272415439603 0.07586199809585818 345.69158511627774 1960718.2417207402 0.014052306263271088 0.03371249501869439 5.422084509055224e-07 6.265833717753258 0.14195535980441376 TKSDES(ph)GEEKNGDEDCQR ddPTM_A549_PD325901_60min_R1 4 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;E5RHK4;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 TKSDES(0.999)GEEKNGDEDCQR;TKSDES(1)GEEKNGDEDCQR;TKS(0.003)DES(0.997)GEEKNGDEDCQR;TKSDES(0.999)GEEKNGDEDCQR 182.17 4.3098999999999996e-40 243151000.0 15067.7 15090.7 16286.6 13992.900000000001 14776.199999999999 15987.2 18400.6 19309.2 12816.6 17211.2 17874.5 True False 16597.361811745523 16362.44624981626 17391.90661528187 14857.209652818352 13738.370687122677 15857.005543739273 19100.844902194673 18924.06285822564 12277.962872927084 16124.481894718232 15676.049815791155 1.0587719487230953 1.0437863136498626 1.109457217835724 0.9477648915004117 0.8763923851073393 1.0115434519585307 1.2184730928166339 1.2071958867573016 0.7832306618826235 1.0286061912405606 1.0 13.936274442246294 -8.770169491038557 24.99389163035778 0.8976367127254602 1.054252435504898 0.16515793188424455 0.11243406011259108 197.4961177309241 565420.2405465074 0.021921808307362983 0.023512397377951987 1.6975810124031183e-09 8.770169491038557 0.1566157227794377 TKSENGLEFTSSGSANTETTK ddPTM_A549_PD325901_60min_R1 1 TKSENGLEFTSSGSANTETTK 21 1 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 187.19 1.6e-44 4729400.0 1308.5 1071.4 1115.5 1264.4 1375.5 1393.7 1035.0 1334.0 1426.6 1461.3 1316.7 False True 1441.3379567332126 1161.6906380786263 1191.2045380464263 1342.4991163392526 1278.8896252173918 1382.350169279762 1074.3874913737318 1307.392323497245 1366.6449631351359 1369.0332686129811 1154.7542472489993 1.2481772291956919 1.0060068112727463 1.0315654095962525 1.1625842637405515 1.1074993906834492 1.1970946827629951 0.930403584947423 1.132182303387824 1.1834942078723065 1.1855624448877018 1.0 10.173370137169712 -11.07271125977475 1.4055127199769926 1.0003087941595192 1.1145958028109635 0.0 0.1031614450692446 0.5714833382758973 2.0241714703840454 0.060770876823860405 0.013569176540355606 8.458410147613788e-12 11.07271125977475 0.11428700865144426 TKSNS(ph)LSEQLAINTSPDAVK ddPTM_A549_PD325901_60min_R1 1 TKSNSLSEQLAINTSPDAVK 20 1 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 T(0.032)KS(0.158)NS(0.778)LS(0.032)EQLAINTSPDAVK 171.72 6.026199999999999e-35 14946000.0 2203.2 2323.5 2361.9 1862.1 2766.9 3331.1 2712.2 2334.5 2970.0 2996.1 3142.7 True False 2426.8672420898833 2519.3094993239597 2522.1927372584983 1977.1176878640633 2572.5624892868054 3303.9726260226867 2815.414255172789 2287.9365661201778 2845.1812284532125 2806.9257346823756 2756.167823216701 0.880522304065471 0.9140624450015145 0.915108548910809 0.7173429974799522 0.9333838337479714 1.1987559676851054 1.0214959450063321 0.8301151137632634 1.032296075908986 1.0184161178568711 1.0 11.428448021162582 -7.0017181310742265 24.98887834575602 1.0143236273396954 0.8600629121512661 0.39331339060896275 0.09306789452381625 54.058970248755166 786270.6890697823 0.013236803867393622 0.024759481773843954 9.960516722249468e-08 7.0017181310742265 -0.15426071518842932 TKSS(ph)DDLLAGMAGGVTVTNGVK ddPTM_A549_MK2206_60min_R1 1 TKSSDDLLAGMAGGVTVTNGVK 22 1 Q69YQ0-2;Q69YQ0;F8WAN1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.292)KS(0.292)S(0.417)DDLLAGMAGGVTVTNGVK 145.67 1.4712999999999997e-27 5707300.0 4677.1 6766.1 7140.1 6298.0 9482.3 6110.6 5759.4 5989.3 10844.0 9399.9 10205.0 True False 5466.480135883632 7110.465589650266 8152.673544879052 7841.0102827279625 8087.466231126856 6757.2196361119995 6805.808429118865 6838.301616461984 8387.851314309644 7276.456061485927 7670.816856328189 0.7126333789828333 0.9269502483016981 1.0628168678220165 1.0221871320339724 1.054316167704479 0.8808996176903247 0.8872338574351807 0.8914698062202586 1.0934756325709853 0.9485894654730381 1.0 12.905164501480828 -5.327210961927846 2.8363027345630387 1.013461932034902 0.6803718329604709 0.4704923298705138 0.07626760783418182 0.21459265016201653 2.5611751725216374 0.011732471079099865 0.15154370345072202 4.707486010486832e-06 5.327210961927846 -0.3330900990744312 TKSS(ph)PAKKES(ph)VSPEDSEK ddPTM_A549_PD325901_60min_R1 1 TKSSPAKKESVSPEDSEK 18 3 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 2 T(0.335)KS(0.379)S(0.398)PAKKES(0.534)VS(0.354)PEDSEK 50.215 0.0060195 9621400.0 1093.7 1041.3 1441.2 1230.4 1276.7 1395.7 1688.9 1904.6 1285.8 1492.6 1400.1 True False 1204.7316188606144 1129.0540054426676 1539.0084986396312 1306.399013558856 1187.0289963758964 1384.333881942861 1753.1720137015418 1866.6112588702033 1231.7622974899455 1398.3569812712906 1227.896575965157 0.9811344395301906 0.9195025277720995 1.2533698104255504 1.0639324509330066 0.9667174089502306 1.12740267302622 1.4277847564836683 1.5201697727701544 1.0031482468478667 1.138823096865587 1.0 10.261973334274211 TKSSS(ph)PVKK ddPTM_A549_MK2206_60min_R1 1 TKSSSPVKK 9 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.007)KS(0.026)S(0.102)S(0.865)PVKK 60.301 0.0016737000000000002 17606000.0 4303.2 5238.2 3517.6 2756.9 12263.0 7797.0 7611.3 6577.3 13566.0 8174.4 8836.7 True False 5029.474956860967 5504.802005838818 4016.448573754789 3432.3406237619442 10459.128944697872 8622.073364770275 8994.174687736993 7509.6524171364645 10493.32266045045 6327.797362632634 6642.303509487045 0.7571883684142838 0.8287489419862312 0.6046770624103808 0.5167395044293916 1.5746237626388715 1.2980547113596317 1.3540746331285263 1.1305795356099893 1.579771632757083 0.9526510424576039 1.0 12.697467930662562 -6.754839816997518 24.99947664721451 1.2940499314315614 0.6825347738535268 0.6624194654768915 0.20320632512589978 80.43566843851734 304691.40834215673 0.033100936090518736 0.06766009495885529 1.7585721172917216e-07 6.754839816997518 -0.6115151575780347 TLADFDPRVS(ph)IR ddPTM_A549_MK2206_60min_R1 2 TLADFDPRVSIR 12 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 T(0.001)LADFDPRVS(0.999)IR;TLADFDPRVS(1)IR 67.115 0.0013773 35892000.0 1187.5 1523.1100000000001 877.57 975.4000000000001 1665.74 1354.54 813.2 1323.26 1744.26 1496.42 1722.75 True False 1387.920968412437 1600.629793271194 1002.0226219211927 1214.3730437873708 1420.711852592436 1497.8765237291186 960.9479137687023 1510.8361573137902 1349.187895010858 1158.3776826911733 1294.9436295188034 1.0718002983096522 1.2360613672936347 0.7737963252450926 0.9377806231137857 1.0971225466550754 1.1567117591718834 0.7420770231718791 1.1667196338694772 1.0418892871129932 0.8945390797602691 1.0 10.338673581659826 -11.088936110838862 1.4967626526387172 1.0003209760265488 1.0254452763068724 0.015639570496076227 0.15130636515782925 3.959798527787282 16.172750442071045 0.09531211086742289 0.02209922040454973 8.148241441715877e-12 11.088936110838862 0.02512430028032364 TLADFDPRVS(ph)IR ddPTM_A549_PD325901_60min_R1 5 TLADFDPRVSIR 12 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 T(0.001)LADFDPRVS(0.999)IR;TLADFDPRVS(1)IR;TLADFDPRVS(1)IR;TLADFDPRVS(1)IR;TLADFDPRVS(1)IR 96.059 0.00021386 103670000.0 7768.079999999999 7552.040000000001 7904.289999999999 7407.2300000000005 9098.4 7927.42 7788.090000000001 9074.9 7574.099999999999 8057.950000000001 8272.78 True False 8556.689763041746 8188.476914686683 8440.722651757043 7864.757774060115 8459.359771776026 7862.861719847722 8084.470026756373 8893.89400037867 7255.7869166422515 7549.169661821655 7255.280505473207 1.17937407886391 1.128623064057895 1.1633902569844912 1.0840046457372852 1.1659590232789057 1.0837433113600736 1.114287727491397 1.225851156777375 1.0000697989786422 1.0405069323131952 1.0 12.82481567786962 -8.786973174539423 24.830124667198103 1.000032920599691 1.139190253011063 0.6554769588025916 0.04146940811234599 70.8141375124326 68862.26488782352 0.006379502078753242 0.006792803247119129 1.6331528212082888e-09 8.786973174539423 0.13915733241137196 TLADFDPRVS(ph)IRLPSTSGSEGVPFR ddPTM_A549_MK2206_60min_R1 1 TLADFDPRVSIRLPSTSGSEGVPFR 25 2 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 T(0.003)LADFDPRVS(0.947)IRLPS(0.015)T(0.015)S(0.017)GS(0.003)EGVPFR 60.348 8.1047e-05 3887000.0 660.33 680.9 858.24 650.8 932.82 646.46 569.72 374.64 823.89 907.46 857.31 True False 771.7775604815031 715.5549016409557 979.9513372581614 810.2460292155224 795.6034136991816 714.8679681145817 673.2307494248712 427.74636728688154 637.2802304819782 702.4641557416585 644.4162664476936 1.197638235819032 1.1103923642173243 1.520680634987824 1.2573332974382467 1.234611003978683 1.1093263862739668 1.0447140838576525 0.6637733861760008 0.9889263565535792 1.0900782495978112 1.0 9.331849100993683 -7.491844250855346 2.0427774761093556 0.9675156965343652 1.2730920790613434 0.5344376335009308 0.13709946976005638 0.1953782924927074 1.6218802273823838 0.021036432654343226 0.03521377597640217 3.222224156359913e-08 7.491844250855346 0.30557638252697816 TLADFDPRVS(ph)IRLPSTSGSEGVPFR ddPTM_A549_PD325901_60min_R1 2 TLADFDPRVSIRLPSTSGSEGVPFR 25 2 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 TLADFDPRVS(0.993)IRLPS(0.004)T(0.001)SGSEGVPFR;T(0.014)LADFDPRVS(0.818)IRLPS(0.068)T(0.031)S(0.033)GS(0.036)EGVPFR 72.60300000000001 6.059700000000001e-06 30167000.0 2834.7 2419.7 2345.8999999999996 2088.92 2814.8 2565.6 2710.2 3101.8 3205.1000000000004 2695.6000000000004 3675.3999999999996 True False 3122.4766572041563 2623.616610937887 2505.106881042681 2217.9478441184688 2617.098158532835 2544.7066042219685 2813.338144078346 3039.9321656849747 3070.4007930354865 2525.3993559660266 3223.349100280223 0.9687057033111005 0.8139411926278174 0.7771751687786156 0.68808800260749 0.8119189318666467 0.7894604416259919 0.8727997050750003 0.9430974030770347 0.9525498782519586 0.7834706317557971 1.0 11.654344730573902 -8.191779589049126 1.5618710337853674 0.978778440308006 0.8006067858346458 0.17113367414648328 0.08611527415415264 0.18677044006291676 0.891344053785665 0.01130137481748948 0.015028667269575286 6.430139737374797e-09 8.191779589049126 -0.17817165447336014 TLADLIR ddPTM_A549_MK2206_60min_R1 1 TLADLIR 7 0 Q16878 Q16878 CDO1 Cysteine dioxygenase type 1 0 91.906 0.03419 1291800.0 429.06 332.13 581.91 693.11 775.2 528.67 671.99 449.71 677.64 829.48 734.81 False True 501.4748384901394 349.033998358071 664.4335881150923 862.9219811148902 661.1691069012304 584.6135084972558 794.0818846205484 513.4577696791143 524.1556219687188 642.0998919011206 552.3363972756995 0.9079156125932935 0.6319228645434536 1.2029509396670077 1.5623123613998617 1.1970406262602442 1.0584374149173537 1.4376779957598582 0.9296106000105243 0.9489789638235371 1.1625159867576418 1.0 9.109403389497635 TLADLIR ddPTM_A549_PD325901_60min_R1 2 TLADLIR 7 0 Q16878 Q16878 CDO1 Cysteine dioxygenase type 1 0 ; 91.041 0.034494 6846100.0 1368.73 1428.56 1326.6399999999999 1333.95 1733.2 1439.74 1449.95 1717.04 1775.1799999999998 1600.73 1893.05 False True 1507.6824619942297 1548.9497647317557 1416.673768134389 1416.3450618797428 1611.4660112154006 1428.0152347842757 1505.128640693085 1682.792290208178 1700.5753579547377 1499.6596346177093 1660.2168510326703 0.9081238159078058 0.9329803897414333 0.8533064624980796 0.8531084725460791 0.9706358601366164 0.8601377789269136 0.9065855702867254 1.0135978858192323 1.024309177982963 0.9032914186390212 1.0 10.69715597772642 -8.242568771628449 5.564975295084219 1.012089540155187 0.8966633162506352 0.4073741501642474 0.046916482268648065 0.06774147255608103 7.196508724177721 0.005310288058487165 0.006747418458916203 5.720463624929988e-09 8.242568771628449 -0.11542622390455182 TLAPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TLAPSPK 7 0 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 T(0.379)LAPS(0.621)PK;T(0.012)LAPS(0.988)PK 66.568 0.024175 14053400.0 5098.4 5381.4 5568.8 4682.6 8999.8 6809.4 5999.5 5631.1 9782.0 8265.7 8270.6 True False 5958.885276087553 5655.290274182164 6358.539577418027 5829.837210209902 7675.941341962966 7529.966188286102 7089.53149121413 6429.325669520493 7566.3926186441295 6398.472629222032 6216.781763052217 0.9585160784479516 0.9096813254396144 1.022802443413457 0.9377580607474406 1.2347130130227306 1.2112321897864335 1.1403860970878645 1.0341887353568489 1.2170915607192399 1.0292258716961318 1.0 12.601952219353988 -6.737455690072174 24.994138917808076 1.118365685548362 0.958482607286755 0.5075234599218439 0.07884555636300344 188.19003046369147 196117.59803749344 0.013580643102560738 0.028258480901378048 1.830392846969799e-07 6.737455690072174 -0.15988307826160686 TLAPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 TLAPSPK 7 0 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 T(0.302)LAPS(0.698)PK 65.22399999999999 0.025185 17019000.0 6144.7 6091.7 6090.7 5819.2 7573.8 7187.0 6879.2 7607.4 6950.8 6069.5 8420.1 True False 6768.5054205109445 6605.068937823008 6504.051528354426 6178.638767637913 7041.842416191558 7128.471454842255 7140.991720442677 7455.6644391101545 6658.682048058111 5686.270734172647 7384.481079411632 0.916585112443708 0.8944526862203397 0.8807729965600569 0.8367058837572652 0.9536001704743519 0.9653313994827414 0.9670268829521661 1.0096395886092777 0.9017129269411914 0.7700298332439777 1.0 12.850280828473666 -6.851995775468564 8.544070510527408 0.9589971933427761 0.8830379895268478 0.09630065338294225 0.06519981086077584 0.18932683976666145 15.92716547606329 0.005928684453399977 0.01123388951102231 1.4060612013031315e-07 6.851995775468564 -0.07595920381592836 TLCVIDPENRDSLGETDIDIAT(ph)EDKSPVDT ddPTM_A549_PD325901_60min_R1 1 TLCVIDPENRDSLGETDIDIATEDKSPVDT 30 2 Q07343-3;Q07343;Q07343-4;Q07343-2 Q07343-3 PDE4B cAMP-specific 3,5-cyclic phosphodiesterase 4B 1 TLCVIDPENRDS(0.004)LGET(0.004)DIDIAT(0.541)EDKS(0.353)PVDT(0.097) 52.106 0.01384 2105300.0 1086.5 838.9 1086.9 1118.2 903.44 1156.5 974.35 1392.5 931.48 1078.4 871.16 True False 1196.800680160974 909.5970471198063 1160.6635700606544 1187.2686743835434 839.985491098801 1147.0818474363534 1011.4294224347776 1364.725495104882 892.3331349089553 1010.3096399591052 764.012842738238 1.5664667047632543 1.1905520381827503 1.5191676175243494 1.553990467134489 1.0994389676595953 1.5013907924966132 1.3238382470244787 1.7862598882679475 1.1679556742931372 1.3223725877933339 1.0 9.577453079343394 -8.969668010745876 14.599653963624556 1.0740613391080516 1.430197126333972 0.26838180136511747 0.19515634849013777 1.297289613084903 624.1273241736347 0.030283474969726467 0.03174223956620244 1.072338723654094e-09 8.969668010745876 0.3561357872259203 TLDFDALS(ph)VGQR ddPTM_A549_MK2206_60min_R1 2 TLDFDALSVGQR 12 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 TLDFDALS(1)VGQR;TLDFDALS(1)VGQR 63.727 0.0045173999999999995 763940.0 906.71 899.0 955.21 514.84 1137.5 1066.3 1059.2 841.31 1404.2 1464.6 1196.7 True False 1059.7404810688347 944.755260060536 1090.6731413851235 640.975823112046 970.1752568371388 1179.1351582473453 1251.6429294931256 960.5682689038175 1086.1509420466246 1133.7458427911236 899.5263627602098 1.1781094195138488 1.0502807912839158 1.2124971390925965 0.7125703588555229 1.078540103994442 1.3108400232197217 1.3914466338178693 1.067860052435039 1.2074698274698192 1.2603808956884908 1.0 9.813021753481703 TLDFDALS(ph)VGQR ddPTM_A549_PD325901_60min_R1 1 TLDFDALSVGQR 12 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 TLDFDALS(1)VGQR 112.44 5.0153999999999994e-05 1775800.0 1587.4 1685.7 1499.6 1630.6 1795.2 1713.5 1566.2 1887.5 1504.0 1554.3 2005.5 True False 1748.5516794178839 1827.7598549646639 1601.3718738273599 1731.3184586387104 1669.111345103789 1699.5458241091142 1625.8025980575248 1849.8523317848951 1440.7921103008862 1456.161232741503 1758.8362139119522 0.9941526479767018 1.0391870718305338 0.9104724255510042 0.9843545663572405 0.9489862284512555 0.966289988042169 0.9243627037002281 1.0517479212407774 0.819173552889452 0.8279117869097952 1.0 10.780405427290784 -8.750584687863835 24.999538516071212 0.9146097269658339 0.9744104379245382 0.2829855661754055 0.06170828492428648 338.75488613523476 780188.6499764994 0.012327501046082106 0.013910676065177692 1.7758869347709004e-09 8.750584687863835 0.05980071095870432 TLDFDPLLSPAS(ph)PK ddPTM_A549_MK2206_60min_R1 1 TLDFDPLLSPASPK 14 0 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.034)PAS(0.966)PK 158.81 4.506100000000001e-19 20782000.0 1959.9 1911.9 2330.3 1871.1 2960.0 2364.6 1617.1 2021.3 3160.8 3250.1 2450.2 True False 2290.683205045504 2009.2075436148361 2660.7715804584896 2329.519583996872 2524.587921088291 2614.820402505554 1910.9061379185546 2307.825464971633 2444.883846760414 2515.900152707518 1841.7477179201683 1.2437551477638347 1.0909244105831037 1.4446992682924136 1.264841846323844 1.370756644096312 1.4197495004681715 1.0375504306727117 1.2530627525781832 1.3274803182714676 1.366039511398798 1.0 10.846859739667705 -10.849860591204717 0.8212149796848135 0.9776977120257351 1.276353338344293 0.0 0.16013817186154433 0.5909448938053949 0.6167632787824602 0.11848484426984109 0.02155203125417931 1.4129910428243727e-11 10.849860591204717 0.298655626318558 TLDFDPLLSPAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TLDFDPLLSPASPK 14 0 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLSPAS(1)PK;TLDFDPLLSPAS(1)PK 242.01 1.3872999999999997e-57 77663000.0 23503.8 22268.9 23308.9 23087.9 25706.4 24590.4 23980.5 24421.8 24745.4 26873.0 28943.3 True False 25889.88847341693 24145.578355711346 24890.7821218022 24513.987146574695 23900.87114626562 24390.143935321128 24893.09105013312 23934.68804046852 23705.436892446513 25176.23419382512 25383.45758669548 1.019951217638171 0.9512328363164774 0.9805906873320712 0.96574657187063 0.9415924156365938 0.9608676773847 0.9806816492635982 0.9429246570811409 0.933893139320449 0.9918362818712698 1.0 14.631600977626375 -3.157100034407672 7.905739693757884 0.9671246443337476 0.9703050584113175 0.0 0.026081503156013607 0.0 0.0 0.0037589197680027477 0.0 0.0006964660732152516 3.157100034407672 0.0031804140775699707 TLDFDPLLSPAS(ph)PKR ddPTM_A549_MK2206_60min_R1 3 TLDFDPLLSPASPKR 15 1 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.023)PAS(0.977)PKR;TLDFDPLLS(0.177)PAS(0.822)PKR;TLDFDPLLS(0.063)PAS(0.937)PKR 83.25299999999999 9.9398e-05 47858600.0 2520.16 2753.34 2465.73 2610.96 3722.58 2875.5 2478.21 2929.7 3456.63 3610.21 4190.87 True False 2945.5013960036094 2893.473245534012 2815.407590904138 3250.6453172104475 3174.9934132719072 3179.7835013975823 2928.4686785301737 3344.9939468299576 2673.708824103848 2794.6610536002613 3150.1613168721315 0.9350319236756632 0.9185158963246394 0.8937344179248642 1.0318980490935903 1.0078828015145689 1.0094033865398562 0.9296249886776968 1.0618484611928636 0.8487529860085502 0.887148552879554 1.0 11.621209994256343 TLDFDPLLSPAS(ph)PKR ddPTM_A549_PD325901_60min_R1 4 TLDFDPLLSPASPKR 15 1 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLS(0.218)PAS(0.782)PKR;TLDFDPLLS(0.007)PAS(0.993)PKR;TLDFDPLLS(0.004)PAS(0.996)PKR;TLDFDPLLS(0.001)PAS(0.999)PKR 125.18 7.2261e-08 85173000.0 9955.2 8765.2 10261.3 9331.0 10317.400000000001 10726.5 9825.0 10190.900000000001 10363.6 10194.699999999999 10947.8 True False 10965.844575369108 9503.874165472082 10957.693524209586 9907.354677761437 9592.741417097732 10639.146940359735 10198.895751446296 9987.63450489361 9928.053932389805 9551.004902161607 9601.290003822121 1.1421220035020065 0.9898538802274215 1.1412730497513877 1.031877453323197 0.9991096418584392 1.1080955721704542 1.0622422348857579 1.040238811755263 1.0340333359827276 0.9947626723450186 1.0 13.229012540192368 -14.99999959311864 0.030500834867347552 0.6150285408376109 1.3118390709122698 0.2670213768108253 0.046733159103905124 979.0951576452956 2.3089763512712285 40.965386616956025 16.789145926089496 1.0000009368793944e-15 14.99999959311864 0.6968105300746589 TLDGFKK ddPTM_A549_PD325901_60min_R1 2 TLDGFKK 7 1 H7BZ94;P07237;H0Y3Z3;I3L0S0 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 60.681999999999995 0.028893000000000002 13690100.0 7555.7 6896.599999999999 7343.599999999999 7168.2 8375.1 8489.5 7651.0 8979.9 7868.9 7650.599999999999 7958.4 False True 8322.749101787638 7477.800685619809 7841.980856654175 7610.963433836626 7786.861868526486 8420.364326684758 7942.162991787849 8800.788849904728 7538.197497836861 7167.539810340433 6979.567252454192 1.1924448609419371 1.071384573734199 1.1235626182836387 1.0904635142186527 1.115665425501621 1.2064307172803506 1.1379162496063324 1.2609361772121541 1.0800379486545157 1.0269318356120352 1.0 12.76892187380582 -9.34820823790613 1.6842384297339215 1.02359192610198 1.1440564830343676 0.46480695666287986 0.05439347637829359 0.20506613516171085 1.195871475614144 0.012282066704618034 0.01060102097954016 4.485302746026245e-10 9.34820823790613 0.12046455693238767 TLDKVS(ph)LEETAQLPSAPQGSR ddPTM_A549_MK2206_60min_R1 2 TLDKVSLEETAQLPSAPQGSR 21 1 Q9BRP8;Q9BRP8-2 Q9BRP8 WIBG Partner of Y14 and mago 1 T(0.056)LDKVS(0.943)LEET(0.001)AQLPSAPQGSR;T(0.025)LDKVS(0.975)LEETAQLPSAPQGSR 104.51 2.5934e-10 12465800.0 2905.2 3230.3 3684.1 3192.0 4415.8 3206.6 2866.8999999999996 3353.3 4912.2 4694.1 4599.6 True False 3395.5267346794203 3394.7084722731356 4206.560777396526 3974.040143294323 3766.24166957489 3545.9202836311892 3387.778620245317 3828.6405440505523 3799.594543171506 3633.6995498059623 3457.3923774980035 0.9821062708354343 0.9818696004443007 1.2166859638999579 1.1494327832614126 1.0893301246589748 1.0256053974982298 0.9798652424567837 1.1073780832539488 1.098976953816605 1.0509942618765031 1.0 11.755468628195057 -7.24124386957912 21.853092695671897 1.0459869757688143 1.089236831662266 0.06948280661676254 0.07158954744462073 393.1067039222976 425369.031041661 0.011541116183278846 0.019961501865231185 5.737941688248809e-08 7.24124386957912 0.04324985589345176 TLDPLVNTS(ph)S(ph)LIMR ddPTM_A549_MK2206_60min_R1 1 TLDPLVNTSSLIMR 14 0 J3KNS1;Q9UPW5 J3KNS1 AGTPBP1 Cytosolic carboxypeptidase 1 2 T(0.156)LDPLVNT(0.427)S(0.493)S(0.924)LIMR 61.375 0.029711 383230000.0 13675.0 11440.0 8059.9 10222.0 12239.0 9189.1 7794.4 9212.4 14006.0 13817.0 20518.0 True False 15983.005678349538 12022.247135809272 9202.915015808001 12726.390458883023 10438.659312905264 10161.48446276909 9210.541587652204 10518.285911791754 10833.66336298607 10695.730103676746 15422.814332008003 1.0363222518460158 0.7795105923604808 0.5967078911602127 0.8251665477468071 0.6768323269794678 0.6588605843280029 0.597202390522004 0.6819952367553598 0.7024439982073984 0.6935005423413013 1.0 13.91277842965046 -10.609962993307235 0.8815639286899899 1.0007826961105755 0.720525919925948 0.0 0.14729570531287928 0.45026983694417305 0.6219168740133404 0.08043208428205391 0.021699144711561646 2.4549180929435035e-11 10.609962993307235 -0.2802567761846274 TLDRS(ph)GDLGDMEPLK ddPTM_A549_MK2206_60min_R1 2 TLDRSGDLGDMEPLK 15 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 T(0.004)LDRS(0.996)GDLGDMEPLK;T(0.071)LDRS(0.929)GDLGDMEPLK 122.53 1.1260999999999999e-07 20052400.0 3532.0 3933.2000000000003 3352.2 2663.6 5229.5 4015.5 4033.1 3774.5 5770.4 5668.9 6772.6 True False 4128.115250890718 4133.383079944492 3827.5923666536264 3316.182119573547 4460.247477476761 4440.417544726827 4765.862064708007 4309.546933921453 4463.413613435298 4388.291552777963 5090.776505748976 0.8109009001335785 0.8119356792184245 0.7518680818792879 0.651409881346904 0.8761428580570835 0.8722475912490554 0.9361758583049078 0.8465401946156376 0.8767647938177602 0.8620082904488733 1.0 12.313670014745211 -9.317771607817255 0.16803080485554098 1.0950117820448566 0.7049097855148228 0.3122576549817717 0.07236501364411443 2.4816692432947534 0.2630528929451957 0.3293623629412273 0.20847575880072636 4.810922847285032e-10 9.317771607817255 -0.39010199653003386 TLDRS(ph)GDLGDMEPLK ddPTM_A549_PD325901_60min_R1 1 TLDRSGDLGDMEPLK 15 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-27;O60716-29;O60716-25;O60716-26;H0YC95;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20;O60716-31;O60716-32;O60716-28;O60716-30 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 T(0.014)LDRS(0.986)GDLGDMEPLK 132.14 6.2186e-10 12672000.0 3979.7 4026.1 3820.2 4253.7 4353.5 3528.1 4106.5 3327.4 4076.1 3980.8 4383.3 True False 4383.716214299705 4365.39357659918 4079.4617447287806 4516.441388146378 4047.7251787596647 3499.3683233378274 4262.775104663026 3261.0323967051972 3904.795692019576 3729.4516086324206 3844.1818880280534 1.1403508840078365 1.1355845544651093 1.061204142663868 1.1748771311294983 1.052948402718796 0.9103024844469301 1.1088900652538316 0.8483033560043138 1.0157676732675665 0.9701548254641806 1.0 11.908460883715481 -6.989414081081951 9.030316125677686 0.9961272872855874 1.1227068778381397 0.5163080693161568 0.06741418362440471 0.10896500013435778 71.03155747083065 0.008785906386093275 0.016387274671150552 1.0246744773698033e-07 6.989414081081951 0.1265795905525523 TLDS(ph)DEERPR ddPTM_A549_MK2206_60min_R1 3 TLDSDEERPR 10 1 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 TLDS(1)DEERPR;TLDS(1)DEERPR;TLDS(1)DEERPR 95.094 0.00018759999999999998 33032600.0 1493.58 1791.24 1426.45 938.5899999999999 2617.2 1873.48 1174.98 1818.72 2789.2 2469.7 2484.1000000000004 True False 1745.6597894749043 1882.406464995367 1628.742059367898 1168.5445921349067 2232.213346983876 2071.730410084624 1388.4586568125314 2076.529129596404 2157.4506534371517 1911.7930547188575 1867.2294123277645 0.9348930441807327 1.008128113539451 0.8722774226962511 0.6258173657826819 1.1954681798853561 1.1095210885211584 0.7435929659449945 1.1120910563462676 1.155428807619084 1.0238661848923738 1.0 10.866683476122688 -6.785065283828265 24.999991164113627 1.0624027428423772 0.8716964059626379 0.2855471064010512 0.14178494457613516 228.6152778008544 241911.07083244863 0.02106815950469273 0.03983061166708835 1.6403431757043972e-07 6.785065283828265 -0.19070633687973937 TLDS(ph)DEERPR ddPTM_A549_PD325901_60min_R1 3 TLDSDEERPR 10 1 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 TLDS(1)DEERPR;TLDS(1)DEERPR;TLDS(1)DEERPR 141.38 1.4261e-08 35719400.0 4386.81 4451.88 3817.62 3813.54 4329.28 3372.2 3834.3399999999997 3537.25 4530.860000000001 4481.73 3903.71 True False 4832.155721801161 4827.05555147422 4076.706650413983 4049.0937046222657 4025.206308005199 3344.737921249345 3980.2579069313542 3466.696773831058 4340.443710690073 4198.752802943171 3423.5784176565576 1.4114342165729552 1.4099444974239392 1.190773557103007 1.1827080354694706 1.175730717090002 0.976971318664528 1.162601646979608 1.0125945285646516 1.2678090527457848 1.2264222666227758 1.0 11.741289342650354 -5.841768778126751 1.4089786071729904 1.1160480694183232 1.4526495573092004 0.5866321145214677 0.09056616388156069 0.33069864753806716 1.0660462103474677 0.015572757977007383 0.11591397546597881 1.439564810140625e-06 5.841768778126751 0.3366014878908772 TLDS(ph)DEERPRPAPPDWSHMR ddPTM_A549_MK2206_60min_R1 9 TLDSDEERPRPAPPDWSHMR 20 2 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 T(0.076)LDS(0.924)DEERPRPAPPDWSHMR;T(0.245)LDS(0.755)DEERPRPAPPDWSHMR;T(0.301)LDS(0.699)DEERPRPAPPDWSHMR;T(0.239)LDS(0.761)DEERPRPAPPDWSHMR;T(0.251)LDS(0.749)DEERPRPAPPDWSHMR;T(0.01)LDS(0.99)DEERPRPAPPDWSHMR;TLDS(1)DEERPRPAPPDWSHMR;T(0.236)LDS(0.764)DEERPRPAPPDWSHMR;T(0.001)LDS(0.999)DEERPRPAPPDWSHMR 230.9 4.2854e-76 278789000.0 15528.22 16185.309999999998 12459.84 12285.11 21378.46 16716.98 14790.720000000001 15402.45 24347.2 23056.64 25088.98 True False 18149.003907470644 17009.073145951497 14226.832669209934 15294.962501499542 18233.71685387472 18485.959727766767 17478.002369819256 17585.794455524836 18832.59807448909 17848.12901046807 18858.693845377835 0.9623680227418755 0.9019221206626847 0.7543911994041335 0.8110297895974516 0.9668600064974122 0.9802354224175275 0.9267875343393955 0.9325033111895509 0.9986162471747672 0.9464138480005364 1.0 14.202942137850329 -6.850313474673873 6.0112543540023795 0.9858995689326389 0.8536326871133743 0.43272811675521516 0.05580506657616537 0.12305526840325692 6.714981042321437 0.00836664520130247 0.01600938156738756 1.411518339917353e-07 6.850313474673873 -0.1322668818192646 TLDS(ph)DEERPRPAPPDWSHMR ddPTM_A549_PD325901_60min_R1 8 TLDSDEERPRPAPPDWSHMR 20 2 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 T(0.009)LDS(0.991)DEERPRPAPPDWSHMR;T(0.381)LDS(0.619)DEERPRPAPPDWSHMR;T(0.118)LDS(0.882)DEERPRPAPPDWSHMR;T(0.016)LDS(0.984)DEERPRPAPPDWSHMR;TLDS(1)DEERPRPAPPDWSHMR;T(0.011)LDS(0.989)DEERPRPAPPDWSHMR;T(0.048)LDS(0.952)DEERPRPAPPDWSHMR;T(0.21)LDS(0.79)DEERPRPAPPDWSHMR 219.34 7.871799999999998e-68 511549000.0 25736.440000000002 24197.300000000003 24786.6 25940.68 25364.400000000005 25499.98 23581.44 25467.87 32313.100000000006 32716.299999999996 38681.6 True False 28349.18444263424 26236.491391431737 26468.76772993415 27542.976888041223 23582.89204642969 25292.31661737141 24478.84460345909 24959.893353692492 30955.09277883218 30650.587234601302 33924.008422865394 0.8356672976040879 0.7733900742032557 0.7802370344918828 0.8119021945966963 0.6951682051385883 0.7455580219796175 0.7215787797930124 0.7357589658204741 0.9124833478689944 0.9035072404339534 1.0 15.050019026753741 -8.92578125436485 2.682099927777956 0.9655884144230982 0.7605742761496976 0.7494262369873406 0.04500143171203832 0.08096123291080368 1.135185673264344 0.00867753504122044 0.008951422636353415 1.1863661471268348e-09 8.92578125436485 -0.20501413827340054 TLDS(ph)VAKER ddPTM_A549_MK2206_60min_R1 1 TLDSVAKER 9 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 T(0.038)LDS(0.962)VAKER 75.479 0.00057703 6025000.0 1556.2 1674.6 1718.6 1278.9 1737.3 1636.6 1710.0 1723.3 2101.6 2701.4 2524.4 True False 1818.8485145628931 1759.8299872050873 1962.3233223945244 1592.230557412003 1481.7454713873935 1809.7839257128426 2020.684865401478 1967.5830523849104 1625.5909555655792 2091.1518637962176 1897.5218101043488 0.9585389242313219 0.9274359735071032 1.0341506020880002 0.8391105435169901 0.7808845534723573 0.9537618572159224 1.0649073199798194 1.036922496441139 0.8566915789369423 1.102043651177438 1.0 10.889900752726309 -7.422785901765682 20.5326486892156 0.9518696620546269 0.9077870801431621 0.0873775036089609 0.09229133316961849 26.922033501861947 5508.9977398182245 0.014037374421181538 0.022440273463353432 3.777583721265818e-08 7.422785901765682 -0.04408258191146475 TLDSGTSEIVKS(ph)PR ddPTM_A549_MK2206_60min_R1 4 TLDSGTSEIVKSPR 14 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR 198.85 6.9483e-32 852624500.0 23976.9 25128.1 24240.899999999998 21747.8 30250.1 23807.8 24666.3 24164.6 34773.6 35217.200000000004 35312.4 True False 28023.614541076346 26407.012959207055 27678.62412768148 27076.011976295846 25800.350362065157 26327.125593661378 29147.8474242412 27590.006050983815 26897.435122028568 27261.610060592368 26543.356507339868 1.0557675527330974 0.9948633644695571 1.0427703112840188 1.020067374252713 0.9720078300922774 0.9918536710450053 1.0981221390060873 1.039431695209855 1.01333963225754 1.0270596355458619 1.0 14.696063196011517 -9.151751718819051 2.661661827822532 1.0048914192969862 1.0253690139216 0.013796383973309512 0.033324732972012695 0.547158093248579 8.04985322038566 0.006489762652496048 0.006206712489604797 7.050960491017962e-10 9.151751718819051 0.02047759462461385 TLDSGTSEIVKS(ph)PR ddPTM_A549_PD325901_60min_R1 4 TLDSGTSEIVKSPR 14 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR 163.8 1.5797e-19 1331692000.0 22188.100000000002 25131.4 23302.4 24242.2 27194.5 25992.100000000002 26917.699999999997 27555.0 26228.8 27861.799999999996 27886.3 True False 24440.61957798409 27249.31127665597 24883.840992714504 25739.585635969168 25284.452135931933 25780.42895525329 27942.067803430633 27005.393908520677 25126.494749108973 26102.601193075465 24456.461885820412 0.999352224049812 1.1141967879031114 1.017475099582654 1.0524656328515245 1.0338556841941058 1.0541356748827393 1.142522901876953 1.1042232533307734 1.027396966348474 1.0673089719576103 1.0 14.57792808394659 -8.956110482020268 5.989784546104859 1.011807662439645 1.0658136910066234 0.06435244123275685 0.043727063463095656 0.18876401038326635 15.224541182973796 0.0071822084848266006 0.007504418128600353 1.106342301052223e-09 8.956110482020268 0.05400602856697834 TLDTFLRS(ph)EEEK ddPTM_A549_PD325901_60min_R1 2 TLDTFLRSEEEK 12 1 Q96SK2-3;Q96SK2-2;Q96SK2 Q96SK2-3 TMEM209 Transmembrane protein 209 1 TLDTFLRS(1)EEEK;TLDT(0.002)FLRS(0.998)EEEK 70.281 0.00087835 6701600.0 2436.5 2169.1400000000003 2415.92 2108.97 2616.3 2245.01 2110.56 2832.8999999999996 2675.7 2397.7 2552.3999999999996 True False 2683.851686343502 2351.9410403974935 2579.8788593071463 2239.236287081613 2432.5401137450112 2226.727382890693 2190.8785157427483 2776.395587132941 2563.2496339973936 2246.308812805958 2238.470980996693 1.1989664861094158 1.0506908779984618 1.1525183400673076 1.0003418878740968 1.0866971849962994 0.9947537411895458 0.9787388509129773 1.2403089478054048 1.1450895078640202 1.0035014221206366 1.0 11.128297900270741 -11.013459853806287 1.353413363931976 1.000942406977717 1.0957160910528532 0.16137901230080687 0.08111154228881556 0.6572151917826867 2.1780798033531967 0.05530429861258521 0.013082111508030826 9.694828841823586e-12 11.013459853806287 0.09477368407513609 TLDTFLRS(ph)EEEKQHR ddPTM_A549_PD325901_60min_R1 1 TLDTFLRSEEEKQHR 15 2 Q96SK2-3;Q96SK2-2;Q96SK2 Q96SK2-3 TMEM209 Transmembrane protein 209 1 T(0.001)LDT(0.005)FLRS(0.993)EEEKQHR 75.97 0.00013201 3679900.0 1193.9 1183.2 1291.4 975.71 1481.4 1435.4 1102.6 1304.4 1465.3 1202.1 1254.9 True False 1315.1038490972728 1282.912416440762 1379.0421698190535 1035.9773907018132 1377.3515745525597 1423.7105783053528 1144.5600463658716 1278.3827187179957 1403.71853671801 1126.19920084833 1100.555255466521 1.194945771750284 1.1656955978070729 1.2530421920837431 0.9413224693226934 1.251506062699874 1.293629348670774 1.0399841722446703 1.1615797683652824 1.2754639349052759 1.023300915837196 1.0 10.104015864954103 -11.016055084059664 1.301515592321487 0.9999969804893141 1.1830427285375575 0.2808618780019867 0.10023210448137225 0.4411069710409372 1.3306906779917411 0.070906892447672 0.016046625488623328 9.637067834140657e-12 11.016055084059664 0.18304574804824347 TLEAEFNSPS(ph)PPTPEPGEGPR ddPTM_A549_MK2206_60min_R1 2 TLEAEFNSPSPPTPEPGEGPR 21 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 TLEAEFNS(0.017)PS(0.979)PPT(0.004)PEPGEGPR;TLEAEFNS(0.196)PS(0.752)PPT(0.052)PEPGEGPR 141.97 1.6282000000000002e-21 9846700.0 4865.299999999999 5637.9 5058.1 5172.0 7737.4 5298.9 5632.4 5508.6 7854.0 7776.0 7827.4 True False 5686.443694835398 5924.845028582084 5775.414638079684 6439.140232179906 6599.238709671798 5859.626080874854 6655.734173033494 6289.46091937998 6075.081540260785 6019.396199333453 5883.640554749947 0.9664838703045261 1.0070032275848109 0.9816056205909977 1.0944142784150022 1.1216250633027094 0.9959184328730439 1.1312271902232751 1.0689743638914868 1.0325378451877527 1.0230734089413245 1.0 12.522493396360248 -3.8833377105424463 12.12297676068615 1.030709874894431 0.709523518585423 0.0 0.054942229854220696 0.0 0.0 0.007326347698756232 0.0 0.00013081642893413345 3.8833377105424463 -0.32118635630900805 TLEAEFNSPS(ph)PPTPEPGEGPR ddPTM_A549_PD325901_60min_R1 2 TLEAEFNSPSPPTPEPGEGPR 21 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 TLEAEFNS(0.003)PS(0.956)PPT(0.041)PEPGEGPR;TLEAEFNS(0.008)PS(0.992)PPTPEPGEGPR 197.45 1.9176999999999998e-55 17599200.0 2925.7 3510.3 3597.0 3154.2 4384.3 3670.8 3451.1000000000004 3915.4 3648.4 3856.0 4377.3 True False 3222.714910213494 3806.1253003989223 3841.1140505181475 3349.027770292053 4076.361893013896 3640.9062218498634 3582.4334990143807 3837.304275428122 3495.0704356527613 3612.531501930922 3838.9198499909176 0.8394848124326217 0.9914573497563194 1.0005715671628923 0.8723880417300133 1.061851263454625 0.948419441957997 0.9331878859161012 0.9995791590796563 0.9104306868144252 0.9410281128790612 1.0 11.906484724183308 -3.4333781592333885 0.00452103013739091 1.8633140412840028 4.3300261808574064e-07 0.03476205109835606 0.060491202771250745 119327.0354002543 51.68954439384917 10091.18252251865 11240.646185447915 0.000368656453446702 3.4333781592333885 -1.8633136082813848 TLEAEFNSPSPPT(ph)PEPGEGPR ddPTM_A549_MK2206_60min_R1 2 TLEAEFNSPSPPTPEPGEGPR 21 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 TLEAEFNS(0.027)PS(0.289)PPT(0.684)PEPGEGPR;TLEAEFNS(0.011)PS(0.009)PPT(0.98)PEPGEGPR 154.19 2.5669e-27 19086000.0 1258.51 1461.26 1123.0 1378.08 2094.9700000000003 1296.18 1480.07 1480.25 1827.03 1745.44 1817.01 True False 1470.91572038462 1535.6318924539019 1282.258286424445 1715.709661864363 1786.8026881899782 1433.3409072653503 1748.9795606636048 1690.0799705755028 1413.2106221673866 1351.1438917392722 1365.796270075147 1.0769656885237278 1.1243491625360862 0.9388356920566889 1.2561973549466228 1.3082497934275856 1.049454401560554 1.2805566972059272 1.237431971081978 1.0347155378375947 0.9892719151040963 1.0 10.415526583756726 -8.881218825375385 6.858317160486755 1.0152426366274514 1.1589203737949658 0.29020488667303723 0.10533021049304461 0.2127333683423325 12.007811230728539 0.018490938601469817 0.019620061803538074 1.314562304611073e-09 8.881218825375385 0.14367773716751442 TLEAEFNSPSPPT(ph)PEPGEGPR ddPTM_A549_PD325901_60min_R1 2 TLEAEFNSPSPPTPEPGEGPR 21 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 TLEAEFNS(0.28)PS(0.28)PPT(0.441)PEPGEGPR;TLEAEFNSPS(0.046)PPT(0.953)PEPGEGPR 259.81 8.950099999999998e-99 32703000.0 4897.4 4229.200000000001 4627.2 5664.3 5550.5 4570.5 4863.1 5806.299999999999 5210.8 4832.8 5833.4 True False 5394.580442724672 4585.609526378692 4941.229617614004 6014.1709464413425 5160.652028185488 4533.279363344444 5048.167931690427 5690.488791545765 4991.808197045117 4527.6561832291945 5115.928780969323 1.0544674630326953 0.8963395939827468 0.9658519164681925 1.1755775351708138 1.0087419604789125 0.8861107254283389 0.986754927173545 1.112308054934959 0.9757384066045014 0.8850115740609141 1.0 12.32078046521128 TLEDPDLNVR ddPTM_A549_PD325901_60min_R1 1 TLEDPDLNVR 10 0 A0A0C4DGH5;Q86VP6-2;Q86VP6 A0A0C4DGH5 CAND1 Cullin-associated NEDD8-dissociated protein 1 0 67.563 0.012526 1663300.0 1192.2 1026.2 957.3 1312.4 1494.7 922.01 1079.6 1384.1 1443.8 1075.8 1275.4 False True 1313.231266348747 1112.6814754492127 1022.2681347125449 1393.463967323343 1389.7174284350674 914.5014562514409 1120.6847687797883 1356.4930396945545 1383.1221069497474 1007.8738044028229 1118.5338854267288 1.1740648034527268 0.9947677848174592 0.9139357761365827 1.2457950407034173 1.2424455320858518 0.8175894071394645 1.001922948764524 1.2127420164629545 1.2365491336206378 0.9010668496809211 1.0 10.127393247448568 -8.238744216307728 24.428860295441154 1.1224027731708486 1.0533114454757395 0.0 0.15184448301384573 1736.703636409179 1869373.2342338983 0.024518262196090924 0.03163834494121786 5.771062579658039e-09 8.238744216307728 -0.06909132769510906 TLEEDEEELFK ddPTM_A549_PD325901_60min_R1 2 TLEEDEEELFK 11 0 C9JJ34;P43487-2;P43487;C9JDM3;F6WQW2 C9JJ34 RANBP1 Ran-specific GTPase-activating protein 0 ; 198.87 1.6394000000000002e-23 5779200.0 2831.7 2856.1000000000004 2963.8999999999996 3439.1 3951.7 3383.9 2998.3 3757.4 3352.8999999999996 3776.0 3746.1 False True 3119.1720994126363 3096.7935704838233 3165.048077378578 3651.525396237205 3674.1462246249125 3356.3426403284684 3112.4019472327163 3682.455709376724 3211.9892730238303 3537.582715583807 3285.3534484844495 0.9494175127037021 0.9426059080225874 0.9633813003707808 1.11145587635987 1.1183412324539435 1.0216077791802787 0.9473568052985238 1.1208704838365138 0.977669320330066 1.07677386042458 1.0 11.68183287315351 -6.021191456713971 24.284305610174794 1.014482031139038 0.9477571433619549 0.21731604359720824 0.06145227594132709 676.3782572438109 775097.1596865465 0.008752233463820378 0.023445381916887904 9.5237622081272e-07 6.021191456713971 -0.06672488777708296 TLEEVVMAEEEDEGTDRPGS(ph)PA ddPTM_A549_MK2206_60min_R1 3 TLEEVVMAEEEDEGTDRPGSPA 22 1 A6NKF1;F8WC89 A6NKF1 SAC3D1 SAC3 domain-containing protein 1 1 TLEEVVMAEEEDEGT(0.044)DRPGS(0.956)PA;TLEEVVMAEEEDEGT(0.053)DRPGS(0.947)PA;TLEEVVMAEEEDEGT(0.003)DRPGS(0.997)PA 79.382 3.4394e-05 3302350.0 1007.2099999999999 811.4899999999999 1053.78 1052.7 1476.05 1061.4 854.43 1366.44 1803.3000000000002 1357.51 1740.48 True False 1177.20242407974 852.7913748459666 1203.2218495711058 1310.6115472574984 1258.9250003116115 1173.7166434997016 1009.6688710789385 1560.1370545469945 1394.855429278364 1050.847548168359 1308.270781195696 0.8998155741151952 0.651846228703936 0.9197039839653222 1.0017892060997213 0.9622816762452 0.8971511558386878 0.7717583283149917 1.192518457930479 1.0661825130754155 0.8032339812771294 1.0 10.353445460251335 -6.2779057328421874 0.4570734912114093 1.0349400199450898 0.7313983117380621 0.0864628956828638 0.13478908338095422 1.9135356397850947 0.4660959057064795 0.027313157063965227 0.26688285006175727 5.273443133833169e-07 6.2779057328421874 -0.30354170820702764 TLEEVVMAEEEDEGTDRPGS(ph)PA ddPTM_A549_PD325901_60min_R1 4 TLEEVVMAEEEDEGTDRPGSPA 22 1 A6NKF1;F8WC89 A6NKF1 SAC3D1 SAC3 domain-containing protein 1 1 TLEEVVMAEEEDEGT(0.081)DRPGS(0.919)PA;TLEEVVMAEEEDEGT(0.188)DRPGS(0.812)PA;TLEEVVMAEEEDEGT(0.043)DRPGS(0.957)PA;TLEEVVMAEEEDEGT(0.001)DRPGS(0.999)PA 78.752 3.0405e-05 6530000.0 1952.25 1624.02 1842.82 1879.7199999999998 2386.11 2143.13 1718.06 2190.91 1821.8899999999999 2257.2799999999997 1818.38 True False 2150.4409828295097 1760.8818648986846 1967.8848469768843 1995.8260352461402 2218.5178652326226 2125.677059832488 1783.4417134585049 2147.210581314355 1745.3222990931379 2114.754955570185 1594.7307876605405 1.3484664618435018 1.1041875396924434 1.2339918826448182 1.2515128262959065 1.3911550980257763 1.332937870316558 1.1183340330908154 1.346440789836571 1.0944306792079397 1.3260890000578194 1.0 10.639097182578176 -8.927491492892726 4.219521470318757 1.039675521566239 1.2602578158282216 0.033725206841756505 0.12342543742158604 0.11632382480129473 3.8100322379633833 0.01599137044922922 0.016697542427205406 1.1817034599253286e-09 8.927491492892726 0.22058229426198261 TLEGELHDLR ddPTM_A549_MK2206_60min_R1 4 TLEGELHDLR 10 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 125.74 1.2730999999999999e-05 11347100.0 1406.64 1203.25 1079.31 782.77 1482.42 1101.844 761.3499999999999 1112.98 1592.46 1548.63 1890.25 False True 1644.046442953828 1264.4902855037155 1232.3723874628383 974.548685139881 1264.357981749899 1218.4404007351477 899.6774399259738 1270.7483233582986 1231.77035263607 1198.7934074297539 1420.8487567539787 1.1570875753938505 0.8899541766799485 0.8673494498304472 0.6858919223509058 0.8898610606792569 0.8575440524146666 0.633197189813042 0.8943586129894682 0.8669257349037833 0.8437164066416719 1.0 10.47253727872645 -10.285969585682885 0.8264504430134803 0.9945668916186174 0.8515538151846049 0.0 0.1332347359105003 0.8451380740295041 1.1047133368508169 0.067135763494259 0.024278814059021964 5.176430820302673e-11 10.285969585682885 -0.1430130764340125 TLEGELHDLR ddPTM_A549_PD325901_60min_R1 2 TLEGELHDLR 10 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;P02545-2;Q3BDU5;Q5TCI8;H0YAB0 P02545;P02545-2;H0YAB0 LMNA Prelamin-A/C;Lamin-A/C 0 ; 195.27 3.5801e-19 22400000.0 1484.62 1545.38 1741.78 1430.03 1768.1100000000001 1821.2599999999998 1553.1 1879.22 1763.92 1814.73 2104.9700000000003 False True 1635.3375294805198 1675.6145961115824 1859.9876649740054 1518.3597052662303 1643.9240532483625 1806.4282623968272 1612.20407038893 1841.7374828804295 1689.7885765970348 1700.1476380962413 1846.0720345042344 0.8858470844663937 0.9076647957356504 1.0075379672134561 0.8224812883176513 0.89049832429201 0.9785253384665168 0.8733159054770525 0.9976520138202685 0.9153427087425817 0.920954115722152 1.0 10.850243133309062 -14.999999999999991 0.20461539487518582 1.3921166654677073 0.9056634616531222 0.01480775895433728 0.05744093450250129 47.0037556753488 0.5593591729768238 7.38629242887839 0.04051775782556449 1.0000000000000204e-15 14.999999999999991 -0.4864532038145851 TLEHSLPPS(ph)PRPLPR ddPTM_A549_MK2206_60min_R1 2 TLEHSLPPSPRPLPR 15 1 Q8TE67-3;Q8TE67;Q8TE67-2 Q8TE67-3 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 TLEHS(0.001)LPPS(0.999)PRPLPR;TLEHSLPPS(1)PRPLPR 78.234 0.00021786 15367500.0 2154.2799999999997 2472.8 2297.2 2668.3 4642.5 3529.8 2724.4 3201.3 5038.9 4331.700000000001 5012.9 True False 2517.8697969107743 2598.654957817234 2622.9775027375185 3322.0336197845404 3959.5943998825633 3903.3210931083904 3219.388214795197 3655.094078570075 3897.5971954698302 3353.165961503697 3768.058580998293 0.6682140796876095 0.6896535449108537 0.6961084724013495 0.8816300353017376 1.0508314334204234 1.0358971362048892 0.854389109296243 0.9700205026010265 1.034378078707369 0.8898922056077281 1.0 11.87960567898082 -6.406105715583044 2.703310941748805 1.0039211368682182 0.6802310517426768 0.8041811962773027 0.061826588804428644 0.06920843156184411 0.9741914453694325 0.0078250823122317 0.020448095346012607 3.925493697444743e-07 6.406105715583044 -0.3236900851255413 TLEHSLPPS(ph)PRPLPR ddPTM_A549_PD325901_60min_R1 3 TLEHSLPPSPRPLPR 15 1 Q8TE67-3;Q8TE67;Q8TE67-2 Q8TE67-3 EPS8L3 Epidermal growth factor receptor kinase substrate 8-like protein 3 1 TLEHSLPPS(1)PRPLPR;TLEHS(0.001)LPPS(0.999)PRPLPR;TLEHS(0.008)LPPS(0.992)PRPLPR 123.36 1.3952e-07 26083400.0 2766.0 3409.25 3003.8199999999997 3657.1400000000003 3810.62 3749.39 3717.75 3480.44 4688.07 3599.88 4446.82 True False 3046.8022837784224 3696.559462263918 3207.6772886370386 3883.0332318324404 3542.9751971253377 3718.8562109462932 3859.2310106808623 3411.0198938476406 4491.046721102573 3372.5829624406374 3899.889330714506 0.7812535242430103 0.9478626568068957 0.8225046960625814 0.9956778007136482 0.9084809584779224 0.9535799340913489 0.9895744938930884 0.8746453051842631 1.1515831194829727 0.8647894020681711 1.0 11.929217469074217 -8.75237775696215 24.998594687070582 1.071580919412197 0.9146139464045434 0.06609258865691336 0.09390780294385968 124.876089602267 344499.6074287902 0.01319400788715161 0.014856032848965944 1.7685699559030638e-09 8.75237775696215 -0.1569669730076536 TLENS(ph)PISSCDTSDTEGPVPVNSAAVLKK ddPTM_A549_MK2206_60min_R1 1 TLENSPISSCDTSDTEGPVPVNSAAVLKK 29 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 T(0.017)LENS(0.588)PIS(0.079)S(0.079)CDT(0.079)S(0.079)DT(0.079)EGPVPVNSAAVLKK 54.326 0.002424 2471800.0 354.48 394.91 411.29 434.6 918.72 527.63 502.29 330.0 840.96 725.57 856.96 True False 414.3075577960763 415.0092322030105 469.61710652138 541.0770195099354 783.5775050210253 583.4634563875517 593.5495912529286 376.7785105826149 650.4839027371668 561.6632330697497 644.1531811072025 0.6431817306000785 0.6442710280335371 0.7290456995247291 0.839981910172213 1.2164459138029458 0.9057837071993741 0.9214416829126049 0.5849206704762201 1.0098279754189565 0.8719404786674111 1.0 9.331259995110331 -6.32762208559699 2.9100431174265613 0.9716051313650099 0.6594879585403082 0.3451796418474612 0.14661390945694724 0.1851569170831358 3.0632370080099958 0.020882339891869096 0.05608100153902231 4.703031790505713e-07 6.32762208559699 -0.31211717282470175 TLENSPISSCDT(ph)SDTEGPVPVNSAAVLK ddPTM_A549_MK2206_60min_R1 1 TLENSPISSCDTSDTEGPVPVNSAAVLK 28 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 T(0.001)LENS(0.001)PIS(0.015)S(0.065)CDT(0.301)S(0.301)DT(0.301)EGPVPVNS(0.014)AAVLK 51.586000000000006 0.0075185 1941000.0 741.1 880.61 611.79 646.23 1030.1 1030.4 722.83 959.7 1254.6 1179.8 1321.9 True False 866.1795618445955 925.4292876105762 698.5510214172846 804.5563790103671 878.5736545652184 1139.436244075836 854.1588545369293 1095.740413957987 970.435103184515 913.282360593314 993.6357474159948 0.871727455556167 0.931356676747195 0.7030252516919862 0.8097095752670541 0.8842009326355238 1.1467343511332029 0.8596297554292074 1.102758648536469 0.9766507552774601 0.9191319484714149 1.0 9.956573267210002 -7.013718074713799 23.311698420022804 0.9980081163911818 0.8297342790352114 0.45465131745272847 0.08917245671896948 165.59521387201062 281404.5483593005 0.01150921971012055 0.020512528972391867 9.689066246347607e-08 7.013718074713799 -0.16827383735597046 TLEPVKPPTVPNDYMT(ph)SPAR ddPTM_A549_MK2206_60min_R1 5 TLEPVKPPTVPNDYMTSPAR 20 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TLEPVKPPT(0.001)VPNDY(0.203)MT(0.542)S(0.254)PAR;TLEPVKPPTVPNDY(0.038)MT(0.775)S(0.186)PAR;TLEPVKPPTVPNDY(0.001)MT(0.555)S(0.445)PAR;TLEPVKPPT(0.011)VPNDY(0.101)MT(0.444)S(0.444)PAR;TLEPVKPPTVPNDY(0.051)MT(0.474)S(0.474)PAR 75.71 0.00013923 78775000.0 10102.199999999999 10215.0 10600.0 9716.5 14188.1 10629.699999999999 10360.900000000001 11235.099999999999 16547.1 14507.8 16822.9 True False 11807.204384923049 10734.899868207312 12103.239391005445 12097.042936190257 12101.049284862414 11754.527798576193 12243.341416338113 12827.709831050717 12799.208270288922 11230.477903895306 12645.30964157995 0.9337220455321182 0.8489234484942241 0.9571327024850317 0.9566426824704317 0.9569595073474584 0.9295563439526452 0.968212069404762 1.0144243355552958 1.012170412039807 0.8881141088841008 1.0 13.626314743786859 -6.924028262930768 0.49241620847831247 1.0083607931683805 0.8906416869709297 0.0911502930957162 0.04607785288690258 0.6119650954725024 0.23929811031161327 0.00685197408970458 0.03185535194633661 1.1911644871370397e-07 6.924028262930768 -0.11771910619745074 TLEPVKPPTVPNDYMT(ph)SPAR ddPTM_A549_PD325901_60min_R1 3 TLEPVKPPTVPNDYMTSPAR 20 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TLEPVKPPTVPNDY(0.032)MT(0.84)S(0.127)PAR;TLEPVKPPTVPNDY(0.091)MT(0.454)S(0.454)PAR;TLEPVKPPT(0.007)VPNDY(0.033)MT(0.48)S(0.48)PAR 69.152 0.00030762 178207000.0 12360.1 11874.4 12724.3 12929.7 13211.0 13551.599999999999 12120.2 13128.9 14091.1 14380.900000000001 13982.900000000001 True False 13614.8882529753 12875.097361210415 13587.847515431771 13728.338203520752 12283.104935475803 13441.240262618652 12581.44084342793 12867.0337900772 13498.900070120219 13472.887519740258 12263.091944906218 1.1102329097867185 1.0499062894622109 1.1080278592444073 1.119484243060182 1.0016319693809275 1.0960726970820607 1.02595992103394 1.0492487414988227 1.100774595083039 1.0986533885800764 1.0 13.58203515720652 -10.933122984908072 1.0980552733150406 0.9984817292888029 1.074115977101063 0.0 0.046330879817909086 0.4590673683313663 0.9501598915203355 0.027489675731866423 0.00594260027711119 1.1664792429415648e-11 10.933122984908072 0.07563424781226025 TLEPVKPPTVPNDYMTS(ph)PAR ddPTM_A549_PD325901_60min_R1 1 TLEPVKPPTVPNDYMTSPAR 20 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TLEPVKPPTVPNDYMT(0.448)S(0.552)PAR 68.23100000000001 0.00034296 21776000.0 3386.3 3185.0 3340.2 3857.3 4233.2 3858.1 3533.4 4116.0 3889.1 3934.5 4185.3 True False 3730.0746831376987 3453.4111277584743 3566.8860582543025 4095.5566604360943 3935.8746357471946 3826.6809127489787 3667.8654705506715 4033.9031510604664 3725.654651709557 3686.07499853403 3670.5346328026376 1.016221083926839 0.9408468992217686 0.9717619952085307 1.115792948480895 1.0722891974845519 1.0425404731373193 0.9992728137672064 1.0989960740352362 1.0150168911128983 1.0042338153119472 1.0 11.84177449920673 -2.0687814136762834 16.529675373484952 1.0188966014149232 0.9414503877759899 0.0 0.050907616073690064 0.0 0.0 0.006752528590175955 0.0 0.00853529598989862 2.0687814136762834 -0.07744621363893334 TLEPVRPPVVPNDYVPS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 TLEPVRPPVVPNDYVPSPTR 20 1 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 TLEPVRPPVVPNDYVPS(0.971)PT(0.029)R;TLEPVRPPVVPNDYVPS(0.907)PT(0.093)R 93.99700000000001 6.9006e-07 29035000.0 2247.24 2619.9 2820.8 2146.33 3375.7 2412.3 2179.7 2381.9 3357.2 3405.8 4079.7 True False 2626.519172256983 2753.241719502333 3220.8318560517146 2672.1809463524164 2879.1390017627514 2667.567984844855 2575.723275506197 2719.5416192628195 2596.7995603467666 2636.427414569171 3066.597896008044 0.8564928501633895 0.8978163466055907 1.0502948104948633 0.8713828930199615 0.9388707288655882 0.8698786327080483 0.8399285993312507 0.8868269370441406 0.8468014550349626 0.8597238711997915 1.0 11.58242329200168 -10.963266651386169 1.2431812818081092 0.9996996380607029 0.893064180779261 0.0 0.06903244166553366 0.44850271577249873 1.2381510277333627 0.040194775254602605 0.009429287813476784 1.0882617090711184e-11 10.963266651386169 -0.10663545728144197 TLEPVRPPVVPNDYVPS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 TLEPVRPPVVPNDYVPSPTR 20 1 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 TLEPVRPPVVPNDYVPS(0.977)PT(0.023)R;TLEPVRPPVVPNDYVPS(0.98)PT(0.02)R 99.711 5.7897e-08 55479000.0 5264.1 4613.9 4812.7 5004.2 6290.6 5611.9 4950.2 5924.0 5943.9 5241.700000000001 6209.2 True False 5798.507556774396 5002.72954548346 5139.3187631161245 5313.298068637208 5848.769957391876 5566.198547019514 5138.582569853376 5805.841172711901 5694.098553469039 4910.73816744588 5445.5077633618 1.0648240363897068 0.9186892688212808 0.9437721855240457 0.9757213283921623 1.0740541032267523 1.022163366375077 0.9436369927569541 1.066170764051514 1.0456506171526914 0.9017961925398527 1.0 12.410850863178181 -6.555922354360311 24.295189965088362 1.022621006243416 0.9683365788011519 0.021475904610008367 0.05939041204931494 150.78074992839913 110860.44783053764 0.006469974812548517 0.01346735160725152 2.780210285149249e-07 6.555922354360311 -0.05428442744226414 TLESFKLDS(ph)TPLK ddPTM_A549_MK2206_60min_R1 2 TLESFKLDSTPLK 13 1 B7ZBC9;B7ZBC8;O75449;O75449-2 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 TLESFKLDS(0.574)T(0.425)PLK;T(0.001)LES(0.001)FKLDS(0.499)T(0.499)PLK 53.828 0.0058976 5884800.0 3214.5 4191.5 3513.1 3504.8 4654.9 3726.1 3557.3999999999996 3849.2 6138.3 5110.0 5580.0 True False 3757.0290130204476 4404.82944665599 4011.310406088796 4363.476157336449 3970.170376308743 4120.393428814997 4203.733532268546 4394.835887680608 4747.984850850877 3955.647450950867 4194.331999834521 0.8957395392564712 1.0501861671488508 0.9563645429706217 1.0403268404858275 0.9465560610045599 0.9823717886370364 1.0022414850408587 1.0478035329234778 1.1320002448633533 0.9430935488909626 1.0 12.034225346277296 -8.218314691211217 3.1927883263014283 1.0633893364160139 0.9829878232990211 0.05244359305916091 0.060887947547224985 0.2496427246602361 5.156992545277065 0.009592583623801327 0.012347318759275916 6.0490240164209326e-09 8.218314691211217 -0.08040151311699273 TLESFKLDST(ph)PLK ddPTM_A549_PD325901_60min_R1 2 TLESFKLDSTPLK 13 1 B7ZBC9;B7ZBC8;O75449;O75449-2 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 TLESFKLDS(0.018)T(0.982)PLK;TLESFKLDS(0.028)T(0.972)PLK 99.45100000000001 6.2238e-05 7753300.0 5558.9 5523.2 6158.4 6109.1 7298.2 7295.9 7442.7 7246.4 7501.1 7570.299999999999 7467.1 True False 6123.235435754111 5988.659447672083 6576.346057467601 6486.445232227244 6785.599609423172 7236.484609347938 7725.936021301714 7101.864867309175 7185.854852777911 7092.309966044516 6548.69403784689 0.935031534587824 0.9144814848673343 1.0042225242866596 0.9904944703081421 1.0361760024528759 1.1050271348036873 1.179767443195725 1.0844704037576565 1.0972958594872009 1.0830113492943638 1.0 12.676991512995134 -6.270888999998632 1.2729302321450184 1.064150038872086 0.9250351613589122 0.6116238474331557 0.04715668011534445 0.3595656668168713 1.0454847750608212 0.00891041289977202 0.03968943696820964 5.359336176479033e-07 6.270888999998632 -0.13911487751317375 TLETQPLAPDCCPS(ph)DQDPAPAHPSPHAS(ph)PMNK ddPTM_A549_MK2206_60min_R1 1 TLETQPLAPDCCPSDQDPAPAHPSPHASPMNK 32 0 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 2 T(0.002)LET(0.006)QPLAPDCCPS(0.819)DQDPAPAHPS(0.425)PHAS(0.748)PMNK 40.535 0.027872000000000004 4098700.0 764.11 1496.4 919.62 877.19 1200.7 980.99 1031.9 1239.4 1883.4 1717.3 1601.2 True False 893.073087304107 1572.5603683588265 1050.0359442223041 1092.1015893785561 1024.078620557672 1084.79771067154 1219.382872870049 1415.0887455033114 1456.812907171781 1329.3607372833517 1203.5778491281417 0.7420152239849206 1.3065713775789174 0.8724287714192633 0.9073792693756056 0.8508619706648 0.9013107971847067 1.0131317004158529 1.1757351188611405 1.2104018931779776 1.1045074801321126 1.0 10.23311374506092 -8.020272155898118 5.211812597726872 1.1076559149674603 0.9406849095581389 0.2883598171958378 0.1400032622632769 0.21565544285002583 17.0861304997673 0.023147609749559456 0.030886069886096112 9.543943158248596e-09 8.020272155898118 -0.16697100540932142 TLETQPLAPDCCPSDQDPAPAHPS(ph)PHAS(ph)PMNK ddPTM_A549_MK2206_60min_R1 1 TLETQPLAPDCCPSDQDPAPAHPSPHASPMNK 32 0 E9PMR3;E9PMG4;Q9BUR4 E9PMR3 WRAP53 Telomerase Cajal body protein 1 2 TLETQPLAPDCCPS(0.029)DQDPAPAHPS(0.974)PHAS(0.997)PMNK 61.608000000000004 0.00054099 2098500.0 832.54 1212.5 869.57 906.63 1373.5 1316.3 1097.8 1115.3 1642.0 1188.7 1348.5 True False 973.0523983512343 1274.2110709937704 992.8881016260943 1128.7543907001668 1171.4599694644478 1455.5899923107752 1297.2560498466319 1273.3971904630014 1270.0896217351935 920.1718444119953 1013.6302332933424 0.95996781310452 1.2570768206605145 0.9795367867039091 1.113576088819667 1.1557074078762506 1.4360167490086404 1.2798119148752825 1.2562738843391257 1.2530107923168392 0.9077983412376173 1.0 9.985315745796349 -5.241352263783185 23.107841178867197 1.1595174339410752 0.9599672955277069 0.13457170808712282 0.14828405433135408 2694.0641588845747 3099063.384681878 0.020324539715749525 0.9915063384375694 5.736509751997812e-06 5.241352263783185 -0.19955013841336833 TLETVPLER ddPTM_A549_MK2206_60min_R1 2 TLETVPLER 9 0 P22626;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 101.64 5.9163e-05 4155100.0 1327.4 1592.4 1501.7 1436.4 1823.0 1293.2 1393.5 1325.7 1914.0 1773.1 2180.6 False True 1551.432668185827 1673.4463583096742 1714.6636408936683 1788.3180644824458 1554.8391149134973 1430.0455656433153 1646.6809122438353 1513.622034785977 1480.4820560299388 1372.555478528569 1639.0968385016397 0.9465167839650341 1.0209563699966835 1.0461027076722977 1.0910386881822156 0.9485950301355193 0.8724594740543664 1.0046269833264572 0.9234488159769961 0.9032303773969227 0.8373852272104153 1.0 10.67868537662172 -6.804397622212943 22.961367334774287 0.9481936121208309 1.0272072828593497 0.36821400238439717 0.05838622263397163 52.72591728617608 28181.97736131856 0.007740792531592702 0.014628888294594246 1.5689257025420383e-07 6.804397622212943 0.07901367073851884 TLFAS(ph)PPAK ddPTM_A549_MK2206_60min_R1 1 TLFASPPAK 9 0 A8CG34 A8CG34 POM121C Nuclear envelope pore membrane protein POM 121C 1 T(0.001)LFAS(0.999)PPAK 48.284 0.032645 1546600.0 1475.5 2008.1 1937.3 2161.5 2539.3 1939.7 1714.9 1429.1 2754.2 2719.5 2788.1 True False 1724.528327488464 2110.303712711415 2212.0382709617793 2691.0675970334237 2165.772333790371 2144.957766531346 2026.47513197485 1631.6793014351958 2130.3780975536347 2105.1630612252234 2095.7378223545916 0.8228740776128817 1.006950244539872 1.0554937966794542 1.2840669134891933 1.033417591975839 1.0234857355017122 0.9669506893271965 0.7785703364373988 1.0165289163699514 1.0044973368186114 1.0 11.033242531095173 -7.505967708969221 3.5498350067232654 0.9845759970123085 1.0520245259547618 0.08399345161073513 0.11802381251238438 0.5797062998147856 15.500902901386707 0.01866515111024479 0.02953459418355893 3.119121491032577e-08 7.505967708969221 0.06744852894245335 TLGLYGK ddPTM_A549_MK2206_60min_R1 2 TLGLYGK 7 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 ; 97.068 0.032376 12255700.0 10831.3 11479.2 11419.7 10118.9 15466.7 11854.0 11055.8 12036.3 16301.7 14288.9 16385.6 False True 12659.358640139484 12063.442248372523 13039.185176741978 12598.030954254687 13191.568918613595 13108.38241195164 13064.495751406816 13742.482384622801 12609.390978465659 11061.027565927952 12316.603300445973 1.0278287228493508 0.979445546316793 1.0586673012574692 1.022849453452684 1.0710395225716118 1.064285508933863 1.0607222975943182 1.1157688568345137 1.023771787633128 0.8980582792276376 1.0 13.588316820869474 -4.436063628335268 16.278617531398808 1.029448416084157 1.0387805575984794 0.0 0.054718883782540105 0.0 0.0 0.005479771793370108 0.0 3.6638389193733716e-05 4.436063628335268 0.009332141514322378 TLGLYGK ddPTM_A549_PD325901_60min_R1 2 TLGLYGK 7 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 ; 110.61 0.023115 22104000.0 17225.7 17646.4 17619.1 17035.4 19992.5 19220.3 16906.0 17605.9 20707.4 18296.6 17874.0 False True 18974.440383109893 19133.524058046183 18814.838078255296 18087.637967799506 18588.295770380748 19063.77624927015 17549.367081318178 17254.73651293863 19837.13998992325 17141.34955348271 15675.611312621399 1.2104434082154363 1.2205918912164277 1.2002618400665697 1.1538712977168575 1.1858099438466025 1.2161424437668171 1.119533186382856 1.1007377108824956 1.2654779194449117 1.093504375148748 1.0 13.93623408544696 -10.953152885601128 1.1475872077649165 0.9972628908246778 1.190395084706883 0.49133423544265475 0.05178221379370962 0.2404122882106065 0.5494092073423862 0.03774438192218004 0.008281150574716305 1.113902335177532e-11 10.953152885601128 0.19313219388220515 TLGLYGKDQQEAALVDMVNDGVEDLR ddPTM_A549_PD325901_60min_R1 1 TLGLYGKDQQEAALVDMVNDGVEDLR 26 1 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 47.018 0.0034969999999999997 1431800.0 941.49 1150.2 1303.5 1419.9 1348.8 1450.7 1490.8 1455.6 1654.7 1445.1 1409.4 False True 1037.0693717116944 1247.1313906272505 1391.9633485822649 1507.6039981731296 1254.064941107392 1438.8859801780513 1547.5332097970625 1426.5669161038902 1585.158713374253 1353.8561393776915 1236.0527349227157 0.8390170924030497 1.0089629312662194 1.126135891499239 1.2196922959499723 1.0145723606087103 1.164097566005562 1.2519961050802757 1.154131110913392 1.2824361522676986 1.0953061314672319 1.0 10.271524580322266 -5.4221990163434155 1.9790457215161572 1.1453215627791224 0.8007172833633295 0.5508791762794742 0.0837681279178136 0.4034185663211544 2.134664732373334 0.015459093856740125 0.2222635499327138 3.782692023503796e-06 5.4221990163434155 -0.34460427941579297 TLGTPTQPGST(ph)PR ddPTM_A549_MK2206_60min_R1 2 TLGTPTQPGSTPR 13 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 TLGTPTQPGS(0.026)T(0.974)PR;TLGTPTQPGS(0.172)T(0.827)PR 164.68 5.9927e-19 22372000.0 6971.8 8127.5 7313.0 7018.7 9299.8 8229.5 7469.7 7635.0 10993.6 10876.8 12367.3 True False 8148.469395855021 8541.155034640718 8350.093364756865 8738.281815081418 7931.811739370565 9100.340227700015 8826.847800637079 8717.284631206858 8503.567153171754 8419.723325734325 9296.158089884137 0.8765416118215541 0.9187833244719671 0.8982305683724595 0.9399885125222014 0.8532354616475142 0.9789356140148686 0.9495156725273691 0.9377298177289826 0.9147399464328322 0.9057207552113892 1.0 13.182418887994947 -14.999999999999996 0.17507513133095773 1.331318221613382 0.8984680871579921 0.0 0.04158050171265078 32.01823637391641 0.3498137276617535 3.6545599368749024 0.037522971954098455 1.0000000000000082e-15 14.999999999999996 -0.43285013445539 TLGTVT(ph)PR ddPTM_A549_MK2206_60min_R1 4 TLGTVTPR 8 0 H0YKY0;H0YN33;Q9BW66-2;Q9BW66;Q9BW66-3 H0YKY0 CINP Cyclin-dependent kinase 2-interacting protein 1 TLGT(0.006)VT(0.994)PR;TLGTVT(1)PR;TLGTVT(1)PR;T(0.001)LGT(0.004)VT(0.995)PR 118.5 0.0013160000000000001 12204200.0 3419.85 4001.67 3126.92 3970.4500000000003 4948.1900000000005 3678.5 3812.57 3663.3500000000004 5504.38 5663.33 6279.860000000001 True False 3997.0370726949654 4205.337910485477 3570.364275143655 4943.210428240273 4220.317805827657 4067.756428409322 4505.2646182945655 4182.641081038858 4257.646718688652 4383.979819646496 4720.397446681146 0.8467585871408421 0.8908864047967399 0.7563694192009054 1.047202165511674 0.8940598442181836 0.8617402399599449 0.9544248485817994 0.8860781593676231 0.9019678463054317 0.9287310802036001 1.0 12.204692620989878 -14.999999994414564 0.14389176535431333 1.3803989714612497 0.8553317265139564 0.1360530519703823 0.06880557974536802 60.65668114645551 0.5817193059237973 6.578612464024563 0.13674278869179196 1.000000012860942e-15 14.999999994414564 -0.5250672449472933 TLGTVT(ph)PR ddPTM_A549_PD325901_60min_R1 2 TLGTVTPR 8 0 H0YKY0;H0YN33;Q9BW66-2;Q9BW66;Q9BW66-3 H0YKY0 CINP Cyclin-dependent kinase 2-interacting protein 1 TLGTVT(1)PR;TLGTVT(1)PR 113.62 0.0014268 25712000.0 4820.4 5676.0 4727.9 4727.5 5722.7 4176.8 4149.9 5211.0 5664.8 5626.6 6456.3 True False 5309.763459409072 6154.336439923736 5048.763725172298 5019.506938068503 5320.757294243234 4142.785525613629 4307.826715412416 5107.062517049586 5426.728155872646 5271.335515758438 5662.216029857757 0.9377535988400748 1.0869130403133598 0.8916586189134027 0.8864915982717458 0.9396952122960415 0.7316544447912386 0.7608022535163913 0.9019547276400689 0.9584106518113498 0.9309668666758484 1.0 12.467151077928872 -8.875503960426698 2.891973855936953 0.9829288656733575 0.8900924951691475 0.10556123714993693 0.08964453942107285 0.3575308909111356 5.732919930724112 0.017567219641662128 0.0184274383912903 1.3319748956863662e-09 8.875503960426698 -0.09283637050421001 TLHCEGTEINS(ph)DDEQESK ddPTM_A549_MK2206_60min_R1 2 TLHCEGTEINSDDEQESK 18 0 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK 248.46 7.291299999999999e-87 116208000.0 6491.4 6720.4 7097.4 5598.6 8714.900000000001 7843.400000000001 7446.6 8172.4 8666.8 9263.4 8762.2 True False 7586.989620507361 7062.439654850753 8103.918042803966 6970.257251330703 7432.9497545582235 8673.383381972453 8799.550829648322 9330.862726925337 6703.78363803567 7170.791506289288 6586.303915582446 1.1519343349093574 1.0722917960317355 1.230419693150056 1.0582957210401218 1.128546427530122 1.3168817432569753 1.336037775121428 1.4167069795928453 1.0178369725963117 1.088742881925629 1.0 12.68525336923238 -8.948630605016437 24.99968954816403 1.0078690474511243 1.2096990094642737 0.3419832043487975 0.10831769972693606 73.80217819485223 35916.96342388976 0.019570051908478065 0.02083175743092552 1.1255619286952823e-09 8.948630605016437 0.2018299620131494 TLHCEGTEINS(ph)DDEQESK ddPTM_A549_PD325901_60min_R1 2 TLHCEGTEINSDDEQESK 18 0 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK 272.27 2.3962999999999996e-101 137790000.0 13155.0 13868.9 15503.400000000001 13649.099999999999 16498.9 13732.7 12748.6 13213.900000000001 12320.0 14136.3 15027.099999999999 True False 14490.485915800846 15037.680875908789 16555.55395351767 14492.173907644807 15340.074182115031 13620.865444262181 13233.7549493016 12950.338398395987 11802.233243954066 13243.731605483948 13178.861964635404 1.099524826550661 1.141045479970987 1.256220301718266 1.0996529098289054 1.1639908076493324 1.0335388200295947 1.0041652295026307 0.9826598406711714 0.8955426709547889 1.0049222490547831 1.0 13.685938174109094 -7.536814896425799 1.4147300314296847 0.9521314426495517 1.159528254351761 0.7331086013990225 0.04985887007824188 0.14675148013089837 0.5881419924125529 0.008841477085657707 0.015526381655224375 2.9052606613167434e-08 7.536814896425799 0.20739681170220936 TLHCEGTEINS(ph)DDEQESKEVEETATAK ddPTM_A549_MK2206_60min_R1 9 TLHCEGTEINSDDEQESKEVEETATAK 27 1 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK 417.42 0.0 1137723000.0 34342.4 42194.7 36741.0 31790.800000000003 48941.9 41719.7 36752.200000000004 38195.7 57525.899999999994 55722.799999999996 56586.299999999996 True False 40138.55752893243 44342.23000186463 41951.42627027654 39579.54742714323 41742.61134294292 46134.450962704446 43429.599011817634 43610.05744442541 44496.375499985734 43134.98077883464 42534.36000756918 0.9436737151279483 1.0425037544698859 0.9862949921618921 0.930531161632616 0.9813856687984639 1.08463959383648 1.021047430926177 1.0252900816343493 1.046127777450217 1.0141208371575021 1.0 15.376341126328294 -7.045630220817192 24.999049107522925 1.0267118874866996 0.978107861794755 0.3967683966160219 0.03344177569739024 394.17029318945333 215950.08426393472 0.005085317619348409 0.008808306474321811 9.002637831215766e-08 7.045630220817192 -0.04860402569194466 TLHCEGTEINS(ph)DDEQESKEVEETATAK ddPTM_A549_PD325901_60min_R1 5 TLHCEGTEINSDDEQESKEVEETATAK 27 1 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK 399.85 0.0 2074013000.0 33338.600000000006 36701.2 42182.5 38052.8 40801.8 40648.4 39960.5 43518.0 29752.699999999997 42426.2 43457.5 True False 36723.11012941987 39794.138926872605 45045.2581139788 40403.23503182091 37936.022326568534 40317.37290733408 41481.21869472465 42649.99935078942 28502.297486801293 39747.40249149942 38112.502999789875 0.9635449587140035 1.0441229464013948 1.1819023829063955 1.0601044762671101 0.9953694808965364 1.0578516165038114 1.0883887288891352 1.119055322895601 0.7478463822478003 1.042896670725577 1.0 15.217976738337292 -8.74545038907907 24.99802171306844 0.8809274477762757 1.0652919906105116 0.25789630566840793 0.09091299528843097 174.0695719340678 272149.2800321044 0.017372795961056238 0.019668267415486673 1.7970063465345945e-09 8.74545038907907 0.18436454283423587 TLHPAVHAGILAR ddPTM_A549_PD325901_60min_R1 1 TLHPAVHAGILAR 13 0 P31939-2;P31939;C9JLK0 P31939-2 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase 0 78.548 0.00081605 1677000.0 0.0 129.43 316.91 321.7 218.35 492.6 319.78 273.86 519.16 401.86 317.79 False True 0.0 140.3375203346245 338.41741833464175 341.5706783662903 203.0138492666068 488.5884289210098 331.9494028903303 268.39764746098615 497.341510627532 376.4864910181435 278.70384463678835 0.0 0.5035363631869333 1.214254574692621 1.2255685916763404 0.728421416400545 1.7530738750939967 1.1910470891527618 0.9630209723542443 1.7844802653356864 1.3508478561133135 1.0 8.122589093903462 -5.613008822183811 2.00521810705054 1.3120472314267508 2.0621210647746022e-17 0.6280053522571654 0.30296140781292047 0.2217445269778034 1.4927812019203306 0.05008495406848021 0.409605766204591 2.4377612975998047e-06 5.613008822183811 -1.3120472314267508 TLHPDLGTDKDKEQWK ddPTM_A549_MK2206_60min_R1 2 TLHPDLGTDKDKEQWK 16 2 P00338;P00338-3;P00338-5;P00338-2;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 129.38 1.5046000000000002e-10 32069000.0 3791.4 3721.6000000000004 3084.6 3023.3999999999996 5737.1 4612.0 4194.5 4614.2 6246.6 6266.5 6095.799999999999 False True 4431.295629169615 3911.013543761169 3522.0426627825827 3764.1331357255813 4893.180189890417 5100.038778802169 4956.58635551257 5268.276980394851 4831.755073770435 4850.893297726737 4582.044624478723 0.9671000595446496 0.8535520415640008 0.7686617987015499 0.8214963939059866 1.0679032159026802 1.1130486926199188 1.0817411792615304 1.1497655331094028 1.0544976030913538 1.0586743899899491 1.0 12.161775793763134 -6.762580118971211 24.999367981127758 1.0492863175529348 0.8467603159396465 0.7546303795436451 0.05982664306864284 13.52775738456113 296472.9035009812 0.009683932342703493 0.019059576732189894 1.727507259277092e-07 6.762580118971211 -0.20252600161328826 TLHPDLGTDKDKEQWK ddPTM_A549_PD325901_60min_R1 2 TLHPDLGTDKDKEQWK 16 2 P00338;P00338-3;P00338-5;P00338-2;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 107.82 2.0362000000000002e-07 44775000.0 6108.299999999999 5486.1 5666.2 5382.700000000001 6148.1 6841.700000000001 5585.5 5414.2 7143.1 6407.6 8351.6 False True 6728.410119307203 5948.432900469626 6050.742405628556 5715.17715400134 5716.278665793569 6785.983463558407 5798.05925900288 5306.209533642268 6842.900347799373 6003.023042472146 7324.406145154358 0.9186287578766436 0.8121385928885113 0.8261068932710094 0.7802922231152292 0.7804426123441168 0.9264892373626553 0.7916081036602168 0.7244559392917777 0.9342600904684215 0.8195917762484531 1.0 12.838496076801462 -8.935747780424665 6.197769022565747 0.9715323870460346 0.81983703703074 0.18908524764683698 0.07277364501337855 0.10271109415347943 7.1788801714102615 0.010150202031854032 0.010692539816779078 1.1594505197092483e-09 8.935747780424665 -0.15169535001529466 TLHS(ph)DDEGTVLDDSR ddPTM_A549_MK2206_60min_R1 1 TLHSDDEGTVLDDSR 15 0 E9PMH2;O00170 E9PMH2 AIP AH receptor-interacting protein 1 T(0.024)LHS(0.976)DDEGTVLDDSR 90.654 9.6845e-06 4177900.0 269.19 184.26 378.03 201.18 279.98 294.88 221.23 297.85 370.57 176.36 339.7 True False 314.6226909363741 193.63804696190698 431.6403383945082 250.46910903131345 238.79531288726318 326.0840058744979 261.4246273524963 340.0711496273694 286.6364866786911 136.5201535126605 255.3431147569509 1.232156548398999 0.7583445010695585 1.6904326510051635 0.9809119359639801 0.9351938591121253 1.2770424853040658 1.0238170220541647 1.3318203232190815 1.1225542030045605 0.5346537487122283 1.0 7.996293347552584 -10.1669190279008 0.9486994061711196 1.0104897312513972 1.1463134886799988 0.12583391378521058 0.27346596119681327 1.2239968585189847 2.187796922130092 0.09087614396109116 0.04085489986320961 6.8089629667108e-11 10.1669190279008 0.13582375742860164 TLHS(ph)DDEGTVLDDSR ddPTM_A549_PD325901_60min_R1 2 TLHSDDEGTVLDDSR 15 0 E9PMH2;O00170 E9PMH2 AIP AH receptor-interacting protein 1 T(0.186)LHS(0.814)DDEGTVLDDSR;T(0.129)LHS(0.871)DDEGTVLDDSR 81.157 0.00010889 12521900.0 596.04 439.54 477.07000000000005 358.7 584.72 459.09000000000003 629.8499999999999 344.15 483.59000000000003 520.75 364.62 True False 656.5495420185433 476.5815783657642 509.44683905496055 380.85608433319373 543.651284374492 455.35132325080457 653.819286417145 337.28565826954764 463.266394029525 487.8697561282489 319.77405151661736 2.0531670374899855 1.4903697661065478 1.5931462751238483 1.191016227010534 1.7001106931474728 1.4239783406163642 2.0446289600929943 1.0547624382587537 1.448730413966847 1.5256702468958658 1.0 8.320909063967767 -12.796931477787352 0.15156070938998842 1.228972820874659e-13 1.7704380926506857 0.08858056562300765 0.3158651761597848 22.558766748313566 0.42226095784376727 8.01972651003397 0.5907462702719583 1.5961309620814365e-13 12.796931477787352 1.770438092650563 TLHS(ph)PPLQLQQR ddPTM_A549_MK2206_60min_R1 1 TLHSPPLQLQQR 12 0 A0A2R8YGT1;F8W9A8;B7WPL9;Q6PFW1-7;Q6PFW1-4;Q6PFW1-3;Q6PFW1-2;Q6PFW1 A0A2R8YGT1 PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 1 T(0.006)LHS(0.994)PPLQLQQR 84.29700000000001 0.00015141 7214500.0 861.93 1008.7 1285.9 836.38 1219.2 1126.6 885.33 1137.9 1810.9 1402.6 1649.2 True False 1007.4027118347223 1060.038521493951 1468.2599559333878 1041.2931375465248 1039.857295064474 1245.8160642234448 1046.1830011028592 1299.2008096725979 1400.7340414130701 1085.7516858519944 1239.6581243955354 0.8126455931758909 0.8551055332379095 1.184407157940678 0.8399841190523923 0.838825862228358 1.0049674500628243 0.8439286449342508 1.048031537167633 1.1299357571637554 0.8758476748429437 1.0 10.275726590561447 -8.359715179282414 7.01589370195997 1.0626006013125917 0.9179848317704687 0.0971649559165998 0.11864760772864545 0.25239144068778085 15.707503715181359 0.017597698303510056 0.0212866221409019 4.368022036668327e-09 8.359715179282414 -0.14461576954212296 TLIPS(ph)PPPRPK ddPTM_A549_MK2206_60min_R1 4 TLIPSPPPRPK 11 1 J3KSG3;J3KSS7;Q9NZ52-3;Q9NZ52-4;Q9NZ52-2;Q9NZ52 J3KSG3 GGA3 ADP-ribosylation factor-binding protein GGA3 1 T(0.009)LIPS(0.991)PPPRPK;T(0.196)LIPS(0.804)PPPRPK;TLIPS(1)PPPRPK;TLIPS(1)PPPRPK 107.37 3.9006e-05 89274000.0 21612.600000000002 23135.300000000003 21926.7 25164.5 26888.3 20827.800000000003 19516.8 19942.2 28689.5 29965.8 31311.4 True False 25260.27850266159 24312.787951144062 25036.235769316896 31329.803629677313 22933.066688715622 23031.783971625297 23062.749930448852 22769.067920426136 22191.37405771731 23196.504967848057 23535.91522932233 1.0732651888204863 1.033007967366141 1.0637460037298818 1.3311487284184695 0.9743860166586746 0.9785803418823943 0.979896031479414 0.9674179949483837 0.9428727900103108 0.9855790497982667 1.0 14.522576335025372 -6.922598223864849 24.999999999060964 0.9729827548286688 1.1191129451425763 0.48902423104478765 0.07351322199743388 22.85733274745902 7381.682959357746 0.01036783695347895 0.019593371967330867 1.1950932023017216e-07 6.922598223864849 0.1461301903139075 TLIPS(ph)PPPRPK ddPTM_A549_PD325901_60min_R1 2 TLIPSPPPRPK 11 1 J3KSG3;J3KSS7;Q9NZ52-3;Q9NZ52-4;Q9NZ52-2;Q9NZ52 J3KSG3 GGA3 ADP-ribosylation factor-binding protein GGA3 1 TLIPS(1)PPPRPK;T(0.003)LIPS(0.997)PPPRPK 118.37 4.395e-06 139649000.0 18802.7 21751.0 21237.6 21007.7 25489.0 22468.6 21962.0 24016.1 23714.6 24507.9 25997.1 True False 20711.53626218386 23584.033105141138 22678.911248063447 22305.297917051674 23698.740572276332 22285.62317104058 22797.77592806754 23537.08004523402 22717.957831742955 22960.467011455632 22799.6215091949 0.9084157933863537 1.0344045884985367 0.994705602411743 0.9783187807769584 1.0394357012777087 0.977455838995089 0.9999190521155529 1.0323452095791024 0.9964182003013071 1.0070547444042377 1.0 14.476722254319295 -5.248828766470796 24.887408579203193 1.001991595311474 0.908415730828206 0.6460844981591172 0.020570184274102274 840.9326226435228 1659574.8749783174 0.002514136742058948 0.06163941725733707 5.638599305685904e-06 5.248828766470796 -0.09357586448326793 TLKPTYRT(ph)PER ddPTM_A549_MK2206_60min_R1 1 TLKPTYRTPER 11 2 H0Y9P1;Q5H9B9;Q9NSY1 H0Y9P1 BMP2K;BMP2KL Putative BMP-2-inducible kinase-like protein;BMP-2-inducible protein kinase 1 T(0.002)LKPT(0.123)Y(0.035)RT(0.84)PER 46.3 0.012351 29257000.0 1782.2 1859.7 1403.7 1567.6 2185.5 1736.0 1537.3 1551.1 2348.3 2277.1 1896.7 True False 2082.9917893933857 1954.350786579065 1602.7657672787118 1951.6620703722383 1864.0158451143434 1919.7023677364623 1816.6075108664866 1770.9731750445271 1816.4137994645278 1762.7015284853667 1425.697043743034 1.4610339542576913 1.3708037027614928 1.1241980014707755 1.3689178068633236 1.3074417551014514 1.3465009106678538 1.274189014306401 1.2421805760324809 1.274053142942419 1.2363787497640866 1.0 10.477451730732366 -12.660758436803887 0.2305224209110923 0.4821038277597165 1.3543393290271022 0.22984616223710042 0.10573308307894178 6.375472449057858 0.20293718676152028 1.6855484550621969 0.054092297396584624 2.1839443271790487e-13 12.660758436803887 0.8722355012673857 TLKPTYRT(ph)PER ddPTM_A549_PD325901_60min_R1 4 TLKPTYRTPER 11 2 H0Y9P1;Q5H9B9;Q9NSY1 H0Y9P1 BMP2K;BMP2KL Putative BMP-2-inducible kinase-like protein;BMP-2-inducible protein kinase 1 TLKPT(0.004)YRT(0.996)PER;TLKPT(0.018)Y(0.008)RT(0.974)PER;TLKPT(0.002)Y(0.001)RT(0.997)PER;T(0.001)LKPT(0.035)Y(0.019)RT(0.945)PER 83.69200000000001 0.00020205 107342000.0 14601.0 14550.0 13834.3 13478.300000000001 15800.300000000001 14363.400000000001 12791.399999999998 13529.2 15533.3 16150.3 16020.8 True False 16083.282771311911 15776.179563229438 14773.178790404001 14310.823979559744 14690.541436075879 14246.429232570094 13278.183726722657 13259.349492547923 14880.489419505826 15130.567301772557 14050.343164218695 1.1446896764963295 1.1228323307722365 1.0514461189834932 1.0185391070023402 1.0455646004068815 1.0139559629298422 0.9450433752064891 0.9437028930592132 1.0590836996352675 1.07688240243874 1.0 13.778317746669712 -5.790519880647032 1.6976400132782579 1.0157587664878676 1.15158709180721 0.5828650054969289 0.03928904064436611 0.24922630212512034 1.2480384226642016 0.005872980022407848 0.03954109079349098 1.6198698396166795e-06 5.790519880647032 0.1358283253193424 TLLDPGRFS(ph)K ddPTM_A549_MK2206_60min_R1 2 TLLDPGRFSK 10 1 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 T(0.007)LLDPGRFS(0.993)K;T(0.001)LLDPGRFS(0.999)K 53.967 0.0056115 35673000.0 4593.0 4590.6 4502.5 4104.8 4951.7 3598.3 3041.3 2689.13 5354.799999999999 4327.9 4431.7 True False 5368.1861119312225 4824.241931962067 5141.022203585097 5110.476184271472 4223.311489477327 3979.0697176417725 3593.8648427751536 3070.322412615234 4141.946349858475 3350.224384142911 3331.1865813022655 1.6114936767764687 1.448205260864169 1.5433005861759053 1.5341308748528961 1.2678099489180525 1.1944901975698488 1.078854262606389 0.9216903159519058 1.2433846765314651 1.0057150214723796 1.0 11.701820446954422 -6.993431419386111 1.7826379782169097 1.1000612076863105 1.5368113578427636 0.8441245537777136 0.09209424663539192 0.12414861612061406 0.7862673052670572 0.016552532663650102 0.0351258148767085 1.0152396731522678e-07 6.993431419386111 0.436750150156453 TLLDPGRFS(ph)K ddPTM_A549_PD325901_60min_R1 2 TLLDPGRFSK 10 1 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 TLLDPGRFS(1)K;T(0.004)LLDPGRFS(0.996)K 61.038000000000004 0.0021514 59696000.0 5110.8 5824.6 5579.1 5409.299999999999 6912.0 5590.9 5928.1 6021.9 5939.1 5796.7 5758.7 True False 5629.6446536278945 6315.459483435477 5957.731275853715 5743.420175588355 6426.524965105499 5545.369564056984 6153.697089480792 5901.788480410842 5689.5002807765895 5430.695372728991 5050.416407407008 1.1146892057002236 1.2504829253629741 1.1796514970757712 1.1372171544439342 1.2724742767111783 1.0980024450902843 1.2184534091992292 1.1685746291642805 1.1265408278874378 1.075296556688724 1.0 12.302186627800676 -9.925682929402338 0.5051876864633572 0.9913411620745454 1.1892602340341594 0.47583459272509954 0.055113890383340594 0.4224608153732555 0.21332352995499693 0.03690077788165092 0.012929858506759019 1.1866347727198478e-10 9.925682929402338 0.197919071959614 TLLS(ph)PSGR ddPTM_A549_PD325901_60min_R1 2 TLLSPSGR 8 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 TLLS(0.787)PS(0.213)GR;T(0.001)LLS(0.499)PS(0.499)GR 64.84100000000001 0.0092315 46978000.0 1339.35 1533.6999999999998 1811.87 1612.04 2005.6799999999998 1651.71 1535.1999999999998 2158.06 1605.1999999999998 2064.9 1935.44 True False 1475.319826022643 1662.9502815206176 1934.8343938594148 1711.6120495915297 1864.8079560203707 1638.2590213827057 1593.6228760936735 2115.015800334681 1537.7390262333656 1934.5218616019624 1697.3931497650194 0.8691680099138379 0.9797083732491969 1.1398858267616232 1.0083769042124853 1.098630541945175 0.9651617962576907 0.9388649154818898 1.246037667011603 0.9059415766148486 1.1397017019125888 1.0 10.729105044901793 TLLSESSSQSS(ph)KSPSLSSK ddPTM_A549_PD325901_60min_R1 1 TLLSESSSQSSKSPSLSSK 19 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 TLLSESSSQS(0.009)S(0.495)KS(0.495)PSLSSK 235.25 1.8997999999999995e-85 186430000.0 8632.9 8151.2 8661.5 8428.9 9409.3 9478.8 9875.4 10356.0 9900.8 9321.9 9097.7 True False 9509.305652794916 8838.130230638884 9249.321475830675 8949.53400957919 8748.423228322803 9401.607795486123 10251.213751026236 10149.441455875167 9484.703806959451 8733.313643114596 7978.74057507193 1.1918304102410533 1.1077099383644526 1.1592457968527559 1.1216725152764488 1.0964666849371694 1.1783323078406225 1.2848160251072982 1.2720605915656893 1.1887469855321051 1.0945729543331923 1.0 12.961945323153266 -10.591131274907138 0.9659250435867771 1.00391924475703 1.1759425848958207 0.3624570720109933 0.06280393036421567 0.34506378383756875 0.5933307332579556 0.03868689783541877 0.011645964296486509 2.563708982855595e-11 10.591131274907138 0.17202334013879073 TLLSESSSQSSKS(ph)PSLSSK ddPTM_A549_MK2206_60min_R1 2 TLLSESSSQSSKSPSLSSK 19 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 TLLSESSSQSSKS(0.983)PS(0.017)LSSK;TLLSESSSQS(0.005)S(0.022)KS(0.973)PS(0.001)LSSK 249.99 1.4522999999999996e-97 203476000.0 10079.2 10679.3 11668.900000000001 9847.099999999999 15321.400000000001 11405.0 12630.2 11968.400000000001 17877.7 17263.1 16017.1 True False 11780.322547219059 11222.830755021663 13323.725483934291 12259.639942053116 13067.642356135859 12611.869529973712 14924.94385204312 13664.95735168778 13828.429494820502 13363.35372025634 12039.612020528575 0.9784636354670395 0.9321588383318142 1.1066573790929635 1.0182753332208192 1.0853873309085378 1.047531225131623 1.2396532235918238 1.1349998096606313 1.1485776677223352 1.1099488669128765 1.0 13.555501281192072 -5.761829999913414 24.999972317412848 1.0849626339804357 0.9553112076271283 0.41186043876007705 0.06446560712504477 8.978131464704258 574815.6140527651 0.010504251405678027 0.035920411899365054 1.7304936104944363e-06 5.761829999913414 -0.1296514263533074 TLLSESSSQSSKS(ph)PSLSSK ddPTM_A549_PD325901_60min_R1 2 TLLSESSSQSSKSPSLSSK 19 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 TLLSES(0.001)S(0.001)S(0.001)QS(0.011)S(0.011)KS(0.968)PS(0.006)LSSK;TLLSESSSQS(0.004)S(0.072)KS(0.924)PS(0.001)LSSK 186.82 4.2908e-44 195867400.0 10022.3 10307.9 12112.6 11266.2 11939.9 11204.2 11906.6 12947.8 12204.099999999999 11556.3 11418.3 True False 11039.756517972697 11176.582908578193 12934.633874980856 11962.087586603355 11101.282614418864 11112.956709940667 12359.712178541518 12689.54597164739 11691.20411790096 10826.633245789506 10013.92148656736 1.1024408901928568 1.1161045074669722 1.291665197528394 1.1945457733665337 1.1085849463978807 1.1097507330018064 1.2342529542618037 1.2671904796406785 1.167495085075662 1.0811581916547193 1.0 13.289719428781183 -10.405202685042918 0.8398253803293606 1.003495922770886 1.1781037605133466 0.3615064892862243 0.06690947802275642 0.3881258101510354 0.5101063242879771 0.0394503075079681 0.012822452625086831 3.933664486619608e-11 10.405202685042918 0.1746078377424607 TLLTGDGGGEATGS(ph)PLAQGK ddPTM_A549_MK2206_60min_R1 2 TLLTGDGGGEATGSPLAQGK 20 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TLLTGDGGGEAT(0.021)GS(0.979)PLAQGK;TLLTGDGGGEAT(0.167)GS(0.833)PLAQGK 238.8 2.676999999999999e-85 10622100.0 3132.3999999999996 3121.3 3238.5 3190.53 4211.5 2877.74 3202.3 3635.2 3881.3 4240.6 4489.0 True False 3661.0725401727314 3280.1608378497767 3697.767996959539 3972.2099932283363 3591.9939289403146 3182.2605367107903 3784.1164587573994 4150.500732333096 3002.1917471624893 3282.6455147753927 3374.2574099027147 1.0850009633018145 0.9721133984097405 1.095876084055529 1.1772101267587827 1.064528722200799 0.9430995179477253 1.121466444039461 1.2300486383025417 0.889734060700795 0.9728497609997208 1.0 11.72035432047629 -8.790088702777396 24.998126547808386 0.9479299713533027 1.081410968099582 0.346271918659218 0.08044047760747158 174.96603486341562 152666.81573937967 0.014929422123406479 0.01589496379438357 1.6214788834574363e-09 8.790088702777396 0.13348099674627933 TLLTGDGGGEATGS(ph)PLAQGK ddPTM_A549_PD325901_60min_R1 2 TLLTGDGGGEATGSPLAQGK 20 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TLLTGDGGGEAT(0.036)GS(0.964)PLAQGK;TLLTGDGGGEAT(0.027)GS(0.973)PLAQGK 303.86 1.4209999999999996e-162 17693800.0 5557.700000000001 5798.0 5153.4 5359.0 6690.9 6098.8 5791.8 6360.0 5468.9 6818.0 5888.299999999999 True False 6121.913612637505 6286.617808082772 5503.140713911657 5690.013258827948 6220.954266351905 6049.133394850693 6012.210118394572 6233.144810676523 5239.061151612042 6387.510316432845 5164.076429009098 1.185480830269625 1.2173750513775938 1.0656582623366826 1.1018452838661354 1.2046596040689515 1.1713872708912292 1.1642372457195056 1.2070202477372243 1.014520451746554 1.236912428435631 1.0 12.334294637541204 -8.773903575172593 24.2336142285971 1.006856846598931 1.1626051318405375 0.0 0.08172341860811443 57.55922550329394 111909.53929826293 0.007693075274026774 0.008220056228906345 1.6830477005618217e-09 8.773903575172593 0.15574828524160655 TLLVADPR ddPTM_A549_MK2206_60min_R1 2 TLLVADPR 8 0 P62249;M0R210 P62249 RPS16 40S ribosomal protein S16 0 ; 99.919 0.0066411000000000005 8605400.0 1665.24 1716.5 1562.5500000000002 1903.81 2374.2 1775.1399999999999 1637.29 1414.83 2729.2 2276.8 2575.0 False True 1946.291800790843 1803.8625182357162 1784.1430858882595 2370.2435354652794 2024.9583250837215 1962.9841365574332 1934.7643995749625 1615.3864852351549 2111.04055763684 1762.4692986937264 1935.556433615393 1.0055463984356154 0.9319606945617762 0.9217727031372002 1.2245799162972177 1.0461892455914272 1.014170448593332 0.9995907977537234 0.8345850615255903 1.0906633983766947 0.9105749995631178 1.0 10.918532656518689 TLLVADPR ddPTM_A549_PD325901_60min_R1 2 TLLVADPR 8 0 P62249;M0R210 P62249 RPS16 40S ribosomal protein S16 0 ; 98.133 0.0067652 16353500.0 2306.1000000000004 2043.8 2628.6 2289.0 2525.9 2176.0 2460.4 2734.8 2629.1 2477.3 2650.4 False True 2540.2135743389085 2216.038198716724 2806.99260305588 2430.3863313038196 2348.4894978819416 2158.2793774505003 2554.0318683825412 2680.252268590904 2518.608069941529 2320.882855221336 2324.417602269877 1.0928387273690834 0.9533735231365841 1.2076111453960559 1.0455893678186141 1.0103560976257266 0.9285247949176013 1.0987835687909253 1.153085515259195 1.0835437089626312 0.9984792977625494 1.0 11.182653569669927 -10.851195622446246 1.1940509690627474 1.0012483145435365 1.063604286398079 0.09404265693517433 0.07679256992087571 0.9831607364637984 2.5651595768444606 0.047988880148740545 0.0127258233253246 1.4086541450868206e-11 10.851195622446246 0.06235597185454256 TLMLPLTEGS(ph)LR ddPTM_A549_MK2206_60min_R1 2 TLMLPLTEGSLR 12 0 Q7L4E1;Q7L4E1-3 Q7L4E1 FAM73B Protein FAM73B 1 TLMLPLT(0.035)EGS(0.965)LR;TLMLPLT(0.087)EGS(0.913)LR 51.841 0.009262799999999998 6016300.0 2548.0699999999997 2525.23 2558.3900000000003 2191.03 2824.82 2412.0299999999997 2612.39 2717.29 3405.5 3616.96 3439.5099999999998 True False 2978.1219216696254 2653.7534208705983 2921.208172222116 2727.832448359076 2409.2927200164254 2667.269413624068 3087.027447676121 3102.474178851615 2634.159687466018 2799.8862239121827 2585.3847413531953 1.1519066675201581 1.0264442960553788 1.1298930195948902 1.055097295473061 0.9318894327330938 1.0316721418522854 1.1940301953125805 1.2000048307037559 1.018865643218461 1.0829669484498918 1.0 11.336163274347195 -8.967845803360765 24.993669383753783 1.0083229855026115 1.085959713752788 0.06726094546804062 0.07850015218036237 238.25422931042385 185197.86173841485 0.013758050771505421 0.014537043725798037 1.076847481412578e-09 8.967845803360765 0.07763672825017665 TLMLPLTEGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 TLMLPLTEGSLR 12 0 Q7L4E1;Q7L4E1-3 Q7L4E1 FAM73B Protein FAM73B 1 TLMLPLTEGS(1)LR;TLMLPLT(0.003)EGS(0.997)LR 136.01 1.1559999999999999e-08 16036700.0 2419.0699999999997 2693.7 2306.79 2815.0 2780.4 3316.5 2825.7 3210.3 2972.8 2912.5 3239.7 True False 2664.652205574789 2920.7075525409705 2463.3426412551453 2988.876156671144 2585.114295859278 3289.4915235820713 2933.23355978237 3146.2680480683684 2847.8635541904764 2728.604252949641 2841.2374381503614 0.937849181414937 1.0279702475138242 0.8669964038129722 1.051962823148246 0.9098550727045823 1.157767203617985 1.032378892519415 1.1073583664012894 1.0023321233034395 0.960357700596102 1.0 11.472303685189331 TLNAET(ph)PK ddPTM_A549_MK2206_60min_R1 1 TLNAETPK 8 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAET(1)PK 85.958 0.0030531 8400800.0 4445.4 5353.9 3705.8 4106.2 5700.7 4212.1 4071.4 4284.7 6464.0 5609.0 6577.7 True False 5195.674840404756 5626.390641644164 4231.338163696977 5112.219184334323 4862.134581671626 4657.8216262343085 4811.120678944781 4892.069346343422 4999.914320886903 4341.923004380318 4944.275554715326 1.0508465361421193 1.1379605726623205 0.8558054899795331 1.0339672875753922 0.983386651464973 0.9420635186467656 0.973068880506962 0.9894410803374187 1.0112531685493367 0.8781717273503198 1.0 12.271543434527187 TLNAET(ph)PK ddPTM_A549_PD325901_60min_R1 1 TLNAETPK 8 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAET(1)PK 58.172 0.016069 9479600.0 5912.8 6075.0 5736.2 6404.6 6560.4 6494.8 6134.9 7154.6 7652.7 7264.2 7395.7 True False 6513.0631032266965 6586.961570214355 6125.493026572758 6800.197596098056 6099.62013615135 6441.908502144073 6368.366976646092 7011.89589032488 7331.083631981112 6805.537172283875 6486.075785204999 1.0041608083092795 1.0155542100262658 0.9444066380700107 1.048430178939565 0.9404176482280442 0.9931904460380075 0.9818520762851082 1.081069065877907 1.1302802919299233 1.049253415725974 1.0 12.663130165424766 -8.25732823095437 24.681068892705785 1.0647063116656315 0.9894628879993612 0.44759820834462294 0.04031087634234417 275.4539104219587 1653669.688656335 0.008544300625271962 0.01083083160796954 5.529320564325685e-09 8.25732823095437 -0.07524342366627024 TLNAET(ph)PKS(ph)SPLPAK ddPTM_A549_MK2206_60min_R1 2 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 2 T(0.006)LNAET(0.986)PKS(0.638)S(0.37)PLPAK;T(0.024)LNAET(0.955)PKS(0.549)S(0.472)PLPAK 75.548 0.00035467 72307000.0 9946.0 9918.5 9867.4 8452.8 12165.8 8920.2 9053.2 6746.0 12623.0 12117.5 13961.0 True False 11624.641643646408 10423.309284661205 11266.745694981808 10523.736379460614 10376.226935937802 9864.129643250457 10698.049253481087 7702.266158758542 9763.91065478888 9380.148334030757 10494.098396001747 1.107731336698291 0.9932543884506064 1.0736268395648396 1.0028242524836777 0.9887678335369092 0.9399692351854344 1.0194348146723158 0.7339616866650599 0.930419201949634 0.8938498554201277 1.0 13.35729060187344 -6.688052891478517 1.3638111580553522 0.9492453713215645 1.0552975766820656 0.3441394504270521 0.07682415400935841 0.4790242121830894 1.7640063402758288 0.011947211082210415 0.03420548897740358 2.050912388881594e-07 6.688052891478517 0.10605220536050108 TLNAET(ph)PKS(ph)SPLPAK ddPTM_A549_PD325901_60min_R1 1 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 2 T(0.004)LNAET(0.99)PKS(0.694)S(0.311)PLPAK 80.238 0.00021582 75781000.0 5093.4 6009.5 5876.9 6744.7 6360.2 5628.4 6061.1 6433.1 5883.3 5850.1 6019.9 True False 5610.478218437098 6515.941655342084 6275.741774670585 7161.3048006749095 5913.481493498844 5582.564176490075 6291.758477261187 6304.78677383068 5636.045360726866 5480.72368761569 5279.490463290231 1.0626931249233837 1.2341989630721455 1.1887021708453813 1.3564386280209157 1.1200856473966436 1.057405864317248 1.1917359300124772 1.1942036485660161 1.0675358540593758 1.038116031409601 1.0 12.36618298289039 -8.997332250803485 0.5969339224210963 1.0049849478927606 1.1930938326418747 0.3603614549206038 0.08072135065785224 0.45396342025293945 0.3636344596689687 0.028665148938844132 0.02392062721964978 1.0061616247233055e-09 8.997332250803485 0.18810888474911414 TLNAET(ph)PKSS(ph)PLPAK ddPTM_A549_PD325901_60min_R1 1 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 2 TLNAET(1)PKS(0.233)S(0.767)PLPAK 135.18 7.5915e-10 79262000.0 6659.0 6721.4 6749.8 6844.6 8675.4 6619.0 7671.3 7697.8 7153.1 8238.1 6423.1 True False 7335.016777903297 7287.835966755353 7207.882017844701 7267.375396785547 8066.069832505248 6565.097058522454 7963.235519396429 7544.261340192724 6852.480082575307 7717.944960077063 5633.099419385621 1.3021280527484986 1.2937524130455 1.2795588149997243 1.2901202083839964 1.4319061731356733 1.1654502379151124 1.4136508033200923 1.3392736002901127 1.2164670942950762 1.3701062923755085 1.0 12.459713218797487 -9.864839613527582 0.6722087935801381 1.0101129972627039 1.315552007609468 0.0 0.1268684586396874 0.24480208188590458 0.2284930961031762 0.03474719189417164 0.015603212830805685 1.3650871749838423e-10 9.864839613527582 0.30543901034676413 TLNAETPKS(ph)SPLPAK ddPTM_A549_MK2206_60min_R1 2 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAETPKS(0.647)S(0.353)PLPAK;TLNAET(0.001)PKS(0.717)S(0.282)PLPAK 173.98 6.202699999999999e-28 108364000.0 15862.6 19095.4 21890.4 20489.7 29054.5 21541.2 20909.1 20254.7 33621.8 32236.9 33644.1 True False 18539.819076664542 20067.274296952128 24994.787883477886 25509.6774198176 24780.621538263422 23820.675486108703 24708.012818225743 23125.865752417227 26006.515982981928 24954.561900500612 25289.341440077504 0.7331080218357684 0.7935071913399192 0.9883526600604624 1.008712602511306 0.9798840193992603 0.9419254962629703 0.9770128999511828 0.9144510863287373 1.0283587670562222 0.986762030147359 1.0 14.626241847807817 -5.708501930153963 3.6163456770847118 0.9966777677520126 0.7454587931420695 0.8641812886173463 0.0330604143467626 0.05710209930804754 1.4822902316738054 0.005208792063088121 0.0227768444950235 1.9565820721923254e-06 5.708501930153963 -0.251218974609943 TLNAETPKSS(ph)PLPAK ddPTM_A549_MK2206_60min_R1 2 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAETPKS(0.165)S(0.835)PLPAK;TLNAETPKS(0.178)S(0.822)PLPAK 209.66 6.695399999999999e-46 127063000.0 14110.4 18597.8 18434.3 18371.6 23812.5 19766.0 18725.8 18690.2 28552.7 31300.0 30449.3 True False 16491.890553841557 19544.348582373554 21048.560934491667 22872.64282473245 20309.712794228 21857.625000391094 22128.035469318696 21339.593086336932 22085.559039292595 24229.308261205915 22887.898452071913 0.720550669532905 0.853916257243981 0.9196371164686926 0.9993334631673848 0.8873559464953618 0.9549861052626457 0.9668006661098922 0.9323526636149148 0.9649448194442384 1.0586078189722383 1.0 14.482297381457347 -4.359619660071217 0.7166321397974527 0.9741225106740898 7.207202530078039e-16 0.7768868348914421 0.040523559390776585 2.372119856511534 0.33399275418502905 0.005353589186296637 2.5374507062800684 4.368982849948728e-05 4.359619660071217 -0.9741225106740892 TLNAETPKSS(ph)PLPAK ddPTM_A549_PD325901_60min_R1 2 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAET(0.001)PKS(0.374)S(0.625)PLPAK;TLNAET(0.001)PKS(0.231)S(0.768)PLPAK 200.99 3.401699999999999e-39 433830000.0 32054.7 33499.1 35640.1 34569.0 40855.0 40349.3 38984.4 39055.0 34728.5 37276.8 37991.2 True False 35308.869546577065 36322.18672210165 38058.851507331645 36704.24861810475 37985.485742098535 40020.70867856776 40467.97267508222 38276.01738694518 33268.98191661191 34923.13648630151 33318.523246059216 1.0597369302900679 1.090149958143709 1.1422730601312918 1.1016169098204551 1.1400711088415754 1.2011549366402743 1.214578820802588 1.1487909324274244 0.9985130994827881 1.0481597947301606 1.0 15.024036838092023 -8.763555029620433 24.942285073261814 0.9992978423815717 1.139498766077265 0.5871240081183524 0.044877367297981675 23.288310994625025 274555.350229601 0.007905415050700044 0.00861997036179066 1.7236336749051852e-09 8.763555029620433 0.14020092369569337 TLNDELEIIEGMK ddPTM_A549_MK2206_60min_R1 2 TLNDELEIIEGMK 13 0 P10809;E7EXB4;E7ESH4 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 88.021 0.00011668 3590800.0 2279.0 2312.8 2106.7 1826.46 3341.3 2372.3 3050.4 2729.6000000000004 3205.2 2895.8 3302.2 False True 2663.6394837995317 2430.5116412324874 2405.4617382104866 2273.942781992906 2849.7991961933453 2623.3352113947076 3604.618194982846 3116.5291590494094 2479.2273176526433 2241.636768779554 2482.1726039164078 1.0731080826517878 0.9791871997126996 0.9690952733968276 0.9161098540871196 1.1481067802041207 1.0568705847673814 1.4522028763412453 1.2555650457716376 0.9988134240708654 0.9030946378356877 1.0 11.27738772493137 -4.885972550890772 17.80021531602833 1.047883336057232 3.77608192529666 0.0 0.15686905329232034 2301.402158117015 365365.9508508459 0.02165360976965329 4332.797172782928 1.3002517564308977e-05 4.885972550890772 2.7281985892394283 TLNMT(ph)TSPEEK ddPTM_A549_PD325901_60min_R1 1 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 T(0.001)LNMT(0.484)T(0.258)S(0.258)PEEK 81.278 0.00037771 31808000.0 10007.0 10626.0 10973.0 9999.6 11718.0 10928.0 10842.0 11311.0 11525.0 11950.0 13357.0 True False 11022.903273235961 11521.490311950241 11717.69376600935 10617.252581260667 10894.968104905425 10839.005991166849 11254.598242970045 11085.39323169216 11040.64432926709 11195.47496060024 11714.173676999228 0.9409885474789762 0.9835512627384618 1.0003004982773163 0.9063594986736142 0.9300671481674962 0.9252898488648184 0.9607675755284764 0.9463231071482509 0.9425030423567466 0.9557204177860662 1.0 13.515967568992396 -10.716405912802356 0.8523096707790977 1.0017788436840798 0.9485561004601872 0.06400993475447037 0.0279919035008123 0.6064847502906294 0.7409940353134504 0.021098942578296618 0.0048060836756408445 1.9212951533098125e-11 10.716405912802356 -0.05322274322389253 TLNMTT(ph)SPEEK ddPTM_A549_MK2206_60min_R1 4 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.003)T(0.498)S(0.498)PEEK;TLNMT(0.094)T(0.623)S(0.283)PEEK;TLNMT(0.009)T(0.496)S(0.496)PEEK;TLNMT(0.01)T(0.495)S(0.495)PEEK 214.42 4.8563e-31 238787000.0 53513.6 57372.3 57058.2 51101.1 76069.9 60295.3 55320.6 58502.0 86604.9 80892.7 88345.9 True False 62545.387398093284 60292.305013093544 65149.91073772328 63620.871794015526 64880.1184791872 66675.70862521906 65371.63693855497 66794.83765486091 66989.02842960667 62618.98288757986 66407.17480720072 0.9418468347686929 0.9079185372384774 0.981067345913636 0.9580421389514817 0.9770046484819298 1.0040437470619399 0.9844062351447382 1.0058376651135317 1.0087619089969606 0.942955080823434 1.0 16.019051502139266 -6.229090259961899 0.6403653738277655 1.0042508132567554 0.9142459933662528 0.40802233319327075 0.023868949176949247 0.4224472025105811 0.22493454689115108 0.002466467658273616 0.022022393646554155 5.9007843069351e-07 6.229090259961899 -0.09000481989050257 TLNMTT(ph)SPEEK ddPTM_A549_PD325901_60min_R1 5 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.017)T(0.882)S(0.101)PEEK;TLNMT(0.007)T(0.688)S(0.305)PEEK;TLNMT(0.031)T(0.485)S(0.485)PEEK;TLNMT(0.059)T(0.657)S(0.283)PEEK;TLNMT(0.013)T(0.494)S(0.494)PEEK 201.08 4.7114e-24 201564200.0 37989.8 39134.5 39580.6 38716.7 45915.2 44250.6 40170.0 43865.9 45774.0 42220.7 45935.8 True False 41846.496529387376 42432.501657539695 42266.77753348306 41108.14262699457 42690.27475084089 43890.23778483969 41698.691331867434 42990.96021236716 43850.27796337286 39554.87779657024 40285.98781102797 1.0387357690142633 1.0532818968366995 1.0491682053756881 1.020407959706068 1.0596804762760408 1.0894665904859628 1.0350668705820527 1.0671442491128076 1.0884746867586848 0.9818520022920328 1.0 15.29799051034341 -5.223984440491 18.822034656780716 1.0474394870950412 1.0387353151502605 0.0 0.03227920124530834 4212.869262297682 2116014.354191207 0.004665889590811368 0.6751573055471649 5.970566770060351e-06 5.223984440491 -0.008704171944780681 TLNMTTS(ph)PEEK ddPTM_A549_MK2206_60min_R1 2 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 T(0.004)LNMT(0.038)T(0.361)S(0.596)PEEK;TLNMT(0.015)T(0.262)S(0.723)PEEK 85.274 0.00015759 17816500.0 12105.900000000001 13565.5 12939.6 12105.1 16489.3 12668.0 11549.1 11637.6 20568.2 18436.0 18417.2 True False 14149.079959161369 14255.926007064732 14774.62985130699 15070.850043418592 14063.74581324363 14008.519351662164 13647.421976028183 13287.265438655271 15909.535540666144 14271.294795641916 13843.700951138417 1.0220590584194784 1.029777084710315 1.0672456667082237 1.088643137887146 1.0158949447753793 1.0119056602786693 0.9858217845211332 0.9598058702331772 1.1492256006409793 1.0308872494438228 1.0 13.756942061692069 -8.750608666153184 24.999949705162326 1.0704676499871226 1.0247582778983793 0.09840830862524663 0.04732159876166586 382.3267825622586 882503.3164845062 0.010588809231161922 0.011950796284151181 1.7757888871165354e-09 8.750608666153184 -0.04570937208874337 TLNMTTS(ph)PEEK ddPTM_A549_PD325901_60min_R1 1 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.009)T(0.304)S(0.687)PEEK 184.8 1.2138e-18 62712000.0 18146.0 17543.0 17804.0 17251.0 20727.0 19646.0 20358.0 19034.0 19942.0 19626.0 20416.0 True False 19988.168561620845 19021.410177163845 19012.28650414932 18316.555090136386 19271.207024268177 19486.00948961055 21132.734830325062 18654.35193811587 19103.907090173056 18386.811010605885 17904.961427687063 1.116348038075773 1.0623541555219649 1.0618445943563979 1.02298768774854 1.0763054197072126 1.0883022322225535 1.180272569459255 1.0418537908308474 1.0669616445323373 1.0269115119217023 1.0 14.128071790241144 -10.188592043722426 0.7168661580303777 1.0014273155885056 1.0800429729781027 0.2909065560143931 0.0397533816566698 0.5853997074919727 0.5753331131608052 0.02388285573166974 0.008395471287920803 6.477507973855195e-11 10.188592043722426 0.07861565738959708 TLPETLDPAEYNIS(ph)PETR ddPTM_A549_MK2206_60min_R1 1 TLPETLDPAEYNISPETR 18 0 F2Z3P9;C9JXQ9;O95168-2;O95168 F2Z3P9 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 1 TLPETLDPAEY(0.003)NIS(0.839)PET(0.158)R 70.281 0.0012223 898160.0 782.24 663.8 718.5 463.91 978.35 805.94 663.38 824.77 1258.6 1102.1 1256.6 True False 914.2629880681646 697.5845846809605 820.3941040035292 577.5679708257111 834.4360110124082 891.2240358603257 783.9075590701937 941.6836732521913 973.5291095712028 853.1348445583079 944.551539604311 0.9679334051492471 0.7385352259053971 0.8685540911268923 0.6114732194154957 0.8834203069130224 0.9435419863204869 0.8299256591107629 0.9969637799189645 1.0306786541039687 0.903216827020049 1.0 9.883485709419487 -7.94463031863544 1.064108056220664 1.0161597374897968 0.8062592436043451 0.3178262829635983 0.09869091348844365 0.28328906562558887 0.6426884647780257 0.01619901671211879 0.024843553523818077 1.1359773740758595e-08 7.94463031863544 -0.20990049388545173 TLPETLDPAEYNIS(ph)PETRR ddPTM_A549_PD325901_60min_R1 1 TLPETLDPAEYNISPETRR 19 1 F2Z3P9;C9JXQ9;O95168-2;O95168 F2Z3P9 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 1 TLPETLDPAEY(0.053)NIS(0.76)PET(0.186)RR 45.395 0.01465 1263800.0 1002.6 1064.2 1085.4 1146.0 998.11 1100.9 1119.7 1116.6 1167.6 985.92 1344.9 True False 1104.38321392489 1153.8838688102248 1159.061771040422 1216.7858172451633 928.006196892571 1091.9346354022318 1162.3107962233494 1094.3285370442456 1118.5298324383734 923.6688429418396 1179.485826023527 0.9363259731981393 0.978293967889707 0.982683933513672 1.0316239418894826 0.7867887654243505 0.9257717314700917 0.9854385449818581 0.9278013460607855 0.9483198591790982 0.7831114393768183 1.0 10.203942366360756 -10.428177619832278 0.751621434371512 1.000539795211874 0.9447784400201501 0.0 0.0870146010850352 1.290598864321684 1.3063220309394294 0.040747583317247045 0.01165396784476183 3.7309753537503834e-11 10.428177619832278 -0.05576135519172387 TLPIRS(ph)PK ddPTM_A549_MK2206_60min_R1 4 TLPIRSPK 8 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 TLPIRS(1)PK;TLPIRS(1)PK;T(0.001)LPIRS(0.999)PK;TLPIRS(1)PK 70.808 0.0017909000000000002 201635000.0 10080.9 10661.0 10128.1 9204.599999999999 12938.7 10255.3 9874.3 10081.3 13283.5 12881.7 13961.0 True False 11782.309465658049 11203.599363187286 11564.416875098324 11459.727413210194 11035.434369792245 11340.50903908281 11668.332494990535 11510.35514768641 10274.808459390644 9971.715023270799 10494.098396001747 1.122755764339613 1.0676095211243548 1.1019924188536643 1.0920163868080703 1.051584800652979 1.0806558706752307 1.1118947102150454 1.096840787396453 0.9791034990967253 0.9502212240615185 1.0 13.35729060187344 -8.760185252768448 24.999997741897015 0.9901322037238167 1.089393489672377 0.8319872174405072 0.022628825842364683 8.602397935858361 171482.1606442003 0.0033344830177093098 0.0036794854769488343 1.737059710047843e-09 8.760185252768448 0.09926128594856021 TLPIRS(ph)PK ddPTM_A549_PD325901_60min_R1 6 TLPIRSPK 8 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 T(0.001)LPIRS(0.999)PK;TLPIRS(1)PK;TLPIRS(1)PK;T(0.033)LPIRS(0.967)PK;TLPIRS(1)PK;T(0.003)LPIRS(0.997)PK 76.92699999999999 0.0012720999999999998 417306000.0 18099.4 19354.600000000002 18584.300000000003 19389.800000000003 20947.4 21835.7 19892.199999999997 20890.1 20464.9 20372.9 22726.6 True False 19936.837763925956 20985.68006697462 19845.542354474408 20587.463908569163 19476.126888606905 21657.87729880327 20649.208556429512 20473.430567533575 19604.831421606777 19086.551617139146 19931.372275787275 1.00027421534569 1.0528968992500392 0.9956937274501098 1.0329175344127666 0.9771593555686376 1.0866224863560128 1.036015396767952 1.0271962353743598 0.9836167399985208 0.9576135226938478 1.0 14.282753422757914 -8.752789816568235 24.745573366587266 0.9922634604195029 1.0269211032759404 0.29518523637169436 0.02993084734106781 166.42753530359926 476131.88843782473 0.004506155485966836 0.005069709801990418 1.7668927284543417e-09 8.752789816568235 0.034657642856437576 TLPKQPS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 TLPKQPSPQK 10 1 Q6PCD5 Q6PCD5 RFWD3 E3 ubiquitin-protein ligase RFWD3 1 T(0.002)LPKQPS(0.998)PQK 72.089 0.00064323 7218900.0 2324.4 2855.3 2948.4 2604.2 3474.0 3037.0 2520.4 2790.6 3560.7 4122.9 4174.7 True False 2716.7018938761003 3000.622574027641 3366.527454758534 3242.2291169069817 2962.9792019799706 3358.373324202556 2978.3240554139666 3186.176095854075 2754.2071352694916 3191.5340265215928 3138.006774141427 0.8657412457687897 0.9562192786689012 1.0728235141173752 1.0332129119746947 0.9442233287691533 1.0702250077587618 0.9491133288674464 1.0153502924562128 0.8776931770719505 1.0170577236547909 1.0 11.615632751375266 -8.720562838600044 24.999457910861427 0.9422438434526842 0.9915514688971566 0.0 0.06695586177154642 273.3802213443576 167194.8970559989 0.01178934184420356 0.013367770363646704 1.9029928712880005e-09 8.720562838600044 0.049307625444472425 TLPKQPS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 TLPKQPSPQK 10 1 Q6PCD5 Q6PCD5 RFWD3 E3 ubiquitin-protein ligase RFWD3 1 T(0.001)LPKQPS(0.999)PQK 71.548 0.00071709 14164000.0 5206.6 4234.8 5128.6 5539.3 6425.3 6888.3 5826.8 6052.6 6301.4 6306.8 7311.9 True False 5735.170199103665 4591.681458031891 5476.657636777139 5881.449980336936 5974.009094081653 6832.2039686085855 6048.542062547305 5931.876144827159 6036.574071708777 5908.587571674779 6412.582653953033 0.8943619924443739 0.7160424599285831 0.854048662187778 0.9171733602078906 0.9316073439457312 1.0654371783257839 0.9432302691363651 0.925036988204816 0.9413639398452877 0.9214052887150599 1.0 12.646689800887378 -6.352286092093516 1.9513944026265306 0.9706297086942904 0.8030321145816385 0.5474352706363781 0.05566496901569 0.1634470513635879 1.1957453693063047 0.007587804303094849 0.02329349676274102 4.4433846245717825e-07 6.352286092093516 -0.16759759411265196 TLPQQES(ph)LEIELAEEKPVKR ddPTM_A549_MK2206_60min_R1 1 TLPQQESLEIELAEEKPVKR 20 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 T(0.018)LPQQES(0.982)LEIELAEEKPVKR 55.763000000000005 0.0015532 2324200.0 815.31 576.03 852.07 852.92 1160.8 822.53 636.73 592.13 1221.5 1072.6 934.68 True False 952.9143955842904 605.3474665769414 972.9063384805672 1061.8854382890336 990.0478577024621 909.5695786487747 752.4155990333815 676.066240822072 944.8322003346765 830.2989150469472 702.5731601443238 1.3563205223902108 0.8616148479862082 1.3847758406835684 1.5114232915912975 1.4091740388987886 1.2946261403750883 1.0709427027910075 0.9622716596278648 1.3448168161456489 1.181797088400567 1.0 9.45650465323182 -7.739518000642447 21.28862398263936 1.1424686502459522 1.300945477838601 0.20872757659470853 0.1807900208421799 74.55643320533565 72402.49139052702 0.03153345889049169 0.046726001980070826 1.8217215647916564e-08 7.739518000642447 0.1584768275926487 TLPQQES(ph)LEIELAEEKPVKR ddPTM_A549_PD325901_60min_R1 1 TLPQQESLEIELAEEKPVKR 20 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TLPQQES(1)LEIELAEEKPVKR 122.04 3.5122e-15 2842600.0 1076.6 1213.3 958.45 772.67 1324.1 1170.2 1555.3 1153.4 855.53 945.64 1317.3 True False 1185.8956394489696 1315.54904907672 1023.4961806280568 820.3960710391098 1231.0997838970181 1160.6702791785733 1614.4877925928167 1130.3945321752044 819.5750492857162 885.9321290160674 1155.2804510527126 1.0265002219749844 1.1387270059646277 0.885928762747979 0.7101271992368173 1.0656285084502362 1.004665385033521 1.3974855985156385 0.9784589803672072 0.7094165304527611 0.7668546007238242 1.0 10.17402740143661 -8.537033452584772 24.471320190531127 0.8617883085923046 1.0310074843393766 0.21078677402171075 0.17140239007639207 269.921718739907 466651.1759990977 0.03214345174595709 0.036456027563717436 2.9037989736978754e-09 8.537033452584772 0.16921917574707201 TLPS(ph)PIDAK ddPTM_A549_MK2206_60min_R1 1 TLPSPIDAK 9 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 T(0.056)LPS(0.944)PIDAK 96.113 0.00090053 8848200.0 1899.3 2416.5 2193.9 1958.4 3397.9 2189.7 2455.9 2229.4 3334.4 3198.5 3493.8 True False 2219.8554065732574 2539.4895282939756 2505.0280094270606 2438.208087915917 2898.073411170914 2421.4126005947783 2902.105240315491 2545.424277251158 2579.163723942648 2475.956628545275 2626.193036025421 0.8452750335264272 0.9669850972331167 0.9538628634924202 0.9284192191774268 1.1035264245300744 0.9220238449262796 1.1050616616924878 0.969244926908914 0.9820922104972342 0.942793082831596 1.0 11.35875724882936 -4.075645576183193 0.830652975164287 0.9972118264697896 1.2682401973089985e-16 0.33826954303370194 0.0588103984043171 10.17699255462958 1.1313090925210363 0.007702587645445558 14.728114743532032 8.4014534187502e-05 4.075645576183193 -0.9972118264697895 TLPS(ph)PIDAK ddPTM_A549_PD325901_60min_R1 2 TLPSPIDAK 9 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 T(0.203)LPS(0.797)PIDAK;T(0.054)LPS(0.946)PIDAK 96.946 0.00087689 40504000.0 10460.9 12043.599999999999 11265.7 10925.0 12887.3 11825.2 11283.4 12545.1 12738.8 11664.3 13845.8 True False 11522.88286709244 13058.556439017868 12030.258148157433 11599.812437524779 11982.140506771431 11728.899491832564 11712.795961513397 12294.878139059434 12203.4325363703 10927.814107358105 12142.85437575772 0.9489435111811102 1.0754107753353508 0.9907273673787048 0.9552788890133539 0.9867647371850936 0.965909590025918 0.9645834166386033 1.0125196068895643 1.004988790834346 0.8999378374474003 1.0 13.567819969982567 -8.292184146377846 24.87339522053623 1.003183926059167 0.9860363858359708 0.0 0.04467849325696983 1501.0603841270197 1214397.42616487 0.005162143199197375 0.006241503578912774 5.102885852542152e-09 8.292184146377846 -0.01714754022319631 TLPSGS(ph)PR ddPTM_A549_PD325901_60min_R1 1 TLPSGSPR 8 0 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 T(0.002)LPS(0.071)GS(0.928)PR 49.443999999999996 0.03337 8580800.0 2819.1 3206.4 2475.5 2856.9 3556.4 3403.4 3112.9 2931.6 3259.2 3436.0 3356.2 True False 3105.292956688268 3476.614580861779 2643.5023163907913 3033.364224509343 3306.610732913949 3375.6838387936727 3231.3631129442424 2873.126938204292 3122.2271581733016 3219.0503736085698 2943.4086767047097 1.0549989137644304 1.1811525216926448 0.8981091675486673 1.0305616914554125 1.1233950484293136 1.1468620941122305 1.097830260037798 0.9761223308687458 1.0607521758306386 1.093647103470679 1.0 11.523272151412765 -10.503086593912238 0.459386063893704 0.9887951440129288 1.06851298215818 0.0 0.07952594694918702 3.193076062286702 0.9894404230392957 0.11500432232498314 0.020800548194011937 3.139882570737599e-11 10.503086593912238 0.07971783814525124 TLPSGS(ph)PRPGQLERPTSLALDSR ddPTM_A549_MK2206_60min_R1 2 TLPSGSPRPGQLERPTSLALDSR 23 2 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 T(0.017)LPS(0.423)GS(0.559)PRPGQLERPTS(0.001)LALDSR;TLPS(0.034)GS(0.965)PRPGQLERPTSLALDSR 101.93 9.2584e-11 78534000.0 1620.87 1693.5 1471.6 1435.08 2199.3 1782.17 2014.63 1461.8600000000001 2466.6000000000004 2080.53 2719.3 True False 1894.433229533194 1779.6919164766603 1680.2950082833588 1786.6746644231885 1875.7858833950934 1970.7580464912976 2380.662193206888 1669.0831317584882 1907.9190383508078 1610.5368280091611 2044.0227611379942 0.9268161125947946 0.870681065941668 0.8220529830831568 0.8740972450954856 0.9176932464053208 0.964156605278746 1.1646945613665634 0.8165677816763836 0.9334137929504212 0.7879250948812855 1.0 10.997195546103022 -7.014788266843781 2.9229868864724766 0.9709326274202676 0.8699838901511495 0.07103181724336993 0.09663343012502897 0.2857825383660547 4.950339308175685 0.011712454643903705 0.022504005094707475 9.665219760900238e-08 7.014788266843781 -0.10094873726911813 TLPSGS(ph)PRPGQLERPTSLALDSR ddPTM_A549_PD325901_60min_R1 2 TLPSGSPRPGQLERPTSLALDSR 23 2 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 TLPS(0.006)GS(0.994)PRPGQLERPTSLALDSR;T(0.001)LPS(0.043)GS(0.956)PRPGQLERPTSLALDSR 180.65 1.0879999999999999e-42 136705000.0 8982.3 7738.1 7991.1 8104.3 8395.900000000001 9679.3 8256.2 8736.0 9179.8 9152.6 10053.2 True False 9894.176483580233 8390.216843864313 8533.424100387985 8604.88420479928 7806.200948282591 9600.47498996169 8570.394208965992 8561.753626740578 8794.004929614412 8574.70327400751 8816.720132485487 1.122206028421479 0.9516256292348774 0.9678683197560407 0.9759733864177348 0.885386042766674 1.0888941517592732 0.9720615013499295 0.9710814790632316 0.9974236221032603 0.9725502392226041 1.0 13.106026349897778 -7.267239314720792 24.990413760727797 0.9998516542880866 0.9780358655688317 0.02474293801353733 0.06064353963889755 1567.027508466769 6751911.295802257 0.008292610831375002 0.013449880671321073 5.404564264112777e-08 7.267239314720792 -0.021815788719254936 TLPSTSS(ph)SGSKR ddPTM_A549_PD325901_60min_R1 1 TLPSTSSSGSKR 12 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TLPST(0.003)S(0.117)S(0.762)S(0.117)GS(0.001)KR 86.944 0.00011784 15615000.0 4996.6 4796.9 5084.1 4893.3 6562.2 5913.7 5471.9 6128.4 6283.3 5697.4 5721.6 True False 5503.851153697495 5201.151597722012 5429.1375991769055 5195.548027509385 6101.293710361011 5865.540787880986 5680.13614883857 6006.164254363205 6019.234751764329 5337.665191675635 5017.87947221073 1.0968480180080253 1.0365238197781061 1.0819585502688425 1.0354070990111646 1.2159107734951158 1.168928193744917 1.1319793909549745 1.1969526744565402 1.1995574595004037 1.063729254804922 1.0 12.29286210277223 TLPSTSSS(ph)GSKR ddPTM_A549_PD325901_60min_R1 1 TLPSTSSSGSKR 12 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TLPST(0.001)S(0.002)S(0.145)S(0.841)GS(0.011)KR 75.911 0.00050245 20369000.0 5054.4 4453.5 5708.9 5998.5 6721.0 7074.2 5930.5 5861.0 5549.8 5468.0 6118.1 True False 5567.518967147383 4828.812074559611 6096.340284404517 6369.013721418067 6248.940146191271 7016.5900606435325 6156.188422794118 5744.097757134449 5316.561205949375 5122.7495468252855 5365.612485831321 1.0376297173620395 0.8999554267682935 1.136187210780277 1.1870059081300361 1.164627554206068 1.307696014047205 1.14734122880667 1.0705390619062733 0.9908582142278309 0.9547371451726434 1.0 12.3895271489964 -8.574406160358553 3.3619586089666953 0.995700090778379 1.1277894684184109 0.30085606060544046 0.09515615261280672 0.252824225453201 5.884335364339801 0.017691448126504916 0.020374831172473486 2.664365734095613e-09 8.574406160358553 0.13208937764003192 TLQPPES(ph)PR ddPTM_A549_MK2206_60min_R1 2 TLQPPESPR 9 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 TLQPPES(1)PR;TLQPPES(1)PR 83.226 0.0014501 40238000.0 6204.3 8007.299999999999 6066.6 5561.5 9616.5 6908.1 5994.6 6821.1 10681.4 10851.7 10562.900000000001 True False 7251.434159428448 8414.837368056425 6926.935102780532 6924.067749665223 8201.925588900518 7639.110556774346 7083.741224640756 7788.011813742647 8262.079954690797 8400.29343316703 7939.840408790687 0.9132972183420636 1.0598244970692157 0.8724274980528948 0.8720663631978246 1.033008872548579 0.9621239424808357 0.892176776852833 0.9808776263462498 1.0405851414271927 1.0579927304164132 1.0 12.95489429407564 -8.52966486641401 7.830405070769963 1.0187987946109116 0.9459591400582154 0.2990608821723314 0.05877275943761768 0.13505887908200784 60.909036413103955 0.009515700477908213 0.010965828798420682 2.95348747583182e-09 8.52966486641401 -0.07283965455269625 TLQPPES(ph)PR ddPTM_A549_PD325901_60min_R1 1 TLQPPESPR 9 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 TLQPPES(1)PR 64.86 0.0060826 33277000.0 8566.5 8935.6 9485.8 10195.0 11729.0 10555.0 10003.0 10669.0 10707.0 11813.0 12404.0 True False 9436.16477367601 9688.634371490925 10129.563430749253 10824.721995475078 10905.195502853358 10469.043579499095 10383.669638851627 10456.19842533141 10257.022024595473 11067.125163980809 10878.386635434474 0.8674231841456458 0.8906315519189091 0.9311641303273724 0.9950668567170988 1.0024644157555092 0.9623709774570787 0.9545229441495128 0.9611901815727105 0.942880812048451 1.0173498639891647 1.0 13.409176987088896 -5.875202404973476 2.520650026214835 0.9727586990301561 0.8738893781536741 0.7379678403900289 0.023076425543461704 0.11953333076365874 1.4908519695900777 0.003465155255278615 0.01479751762867076 1.332900083068659e-06 5.875202404973476 -0.09886932087648204 TLQPSS(ph)QNTK ddPTM_A549_PD325901_60min_R1 1 TLQPSSQNTK 10 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TLQPS(0.139)S(0.853)QNT(0.008)K 83.617 0.00010903 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TLQRLS(ph)SGFDDIDLPSAVK ddPTM_A549_MK2206_60min_R1 1 TLQRLSSGFDDIDLPSAVK 19 1 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 T(0.135)LQRLS(0.432)S(0.432)GFDDIDLPSAVK 137.89 1.2435e-17 5601300.0 2034.4 2422.8 2364.8 2418.5 2940.8 2264.5 1939.3 2511.7 3609.0 3321.3 3425.9 True False 2377.7569836953785 2546.1101713845005 2700.1641992311024 3011.03260857059 2508.2122156542027 2504.1278869465555 2291.645707294201 2867.741166758647 2791.5672623887394 2571.01602325697 2575.1544799700873 0.9233453768268683 0.9887213334922245 1.0485445514952048 1.1692629051929988 0.9740045636731424 0.9724185117529893 0.8899061105339283 1.113619081520872 1.0840387573257997 0.9983929287561943 1.0 11.330443264842165 TLQRLSS(ph)GFDDIDLPSAVK ddPTM_A549_MK2206_60min_R1 2 TLQRLSSGFDDIDLPSAVK 19 1 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 TLQRLS(0.336)S(0.664)GFDDIDLPSAVK;TLQRLS(0.373)S(0.627)GFDDIDLPSAVK 197.86 4.7515e-55 71110000.0 8188.5 9838.099999999999 9866.5 8778.4 12357.3 9443.5 9314.2 9603.7 13375.7 13152.7 12873.0 True False 9570.518610395993 10338.817268077364 11265.718061448611 10929.108394077353 10539.557539616322 10442.804901912032 11006.469575042356 10965.05388509775 10346.125306603793 10181.49593505313 9676.27882327415 0.9890701565333386 1.0684703755342007 1.164261413628493 1.1294743148357609 1.089215981898511 1.0792170309100821 1.137469245777491 1.1331891200493043 1.0692256285255521 1.0522119216494457 1.0 13.240236626030287 -9.81058286132316 0.8730429749987483 1.0085726840035825 1.100248927011481 0.23079520385167485 0.04683063583329615 0.3919941274806483 0.6193218897724979 0.01702585329077813 0.009496507258914662 1.5467393652732797e-10 9.81058286132316 0.09167624300789856 TLQRLSS(ph)GFDDIDLPSAVK ddPTM_A549_PD325901_60min_R1 2 TLQRLSSGFDDIDLPSAVK 19 1 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 T(0.002)LQRLS(0.399)S(0.599)GFDDIDLPSAVK;TLQRLS(0.058)S(0.942)GFDDIDLPSAVK 226.18 2.4211999999999997e-75 153565000.0 11017.5 12322.1 12704.2 12060.400000000001 13915.0 13797.3 12933.099999999999 14057.8 13423.1 14069.7 16230.6 True False 12135.988489345176 13360.526611413714 13566.383408560652 12805.3435168443 12937.658404143964 13684.939363280228 13425.276197763867 13777.40615086924 12858.973787087642 13181.33674084997 14234.339094250467 0.8525853156222156 0.9386123600786141 0.9530743449859491 0.8996092781024609 0.9089047491758674 0.9614032146253877 0.9431611899133838 0.9678992512152678 0.9033769465476369 0.9260237973517278 1.0 13.797087889308072 TLQTDSIDSFET(ph)QRTPRK ddPTM_A549_MK2206_60min_R1 2 TLQTDSIDSFETQRTPRK 18 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TLQTDSIDSFET(0.5)QRT(0.5)PRK;TLQTDSIDS(0.003)FET(0.498)QRT(0.498)PRK 147.9 2.1273000000000004e-17 10302000.0 1443.5700000000002 1701.75 1524.03 1304.1799999999998 1938.34 1952.1100000000001 1463.72 1635.46 2375.1 2042.68 2153.73 True False 1687.2093241020143 1788.361806238062 1740.1603706673611 1623.7041585468637 1653.2127537034705 2158.6809844942554 1729.6589773014325 1867.291463386191 1837.1436422553327 1581.2371692971283 1618.8994010759131 1.0421952858718107 1.1046775389808192 1.0749033383487934 1.0029679160223033 1.02119548169871 1.3334250312648246 1.068416589784337 1.1534326729290267 1.1348102550624055 0.9767359035689588 1.0 10.660797623558818 -3.8797841498031103 14.901078001302182 1.0821947756116257 0.543213706254473 0.0 0.09590889109719944 0.0 0.0 0.012315358937437907 0.0 0.0001318912092726752 3.8797841498031103 -0.5389810693571527 TLQTDSIDSFET(ph)QRTPRK ddPTM_A549_PD325901_60min_R1 1 TLQTDSIDSFETQRTPRK 18 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TLQTDSIDS(0.001)FET(0.5)QRT(0.5)PRK 118.32 1.4161000000000002e-10 12023000.0 1928.4 2070.9 2418.2 2619.0 3577.5 3618.6 3084.1 3587.0 2901.8 2331.8 2586.9 True False 2124.169748386953 2245.4220108241825 2582.3135938179007 2780.7696818194436 3326.2287417049965 3589.1313213430053 3201.467113184276 3515.454471052937 2779.8474372813253 2184.5697500525216 2268.727699710212 0.9362823703603902 0.989727419077659 1.1382210364636283 1.2256956540772326 1.4661207434148489 1.582001807357247 1.4111288514673683 1.5495268433941944 1.2252891511116117 0.9629052223109719 1.0 11.14766774697682 -4.087046754512594 13.767970322897508 1.1957903125121498 1.1550466515675437 0.0 0.2337816410363221 0.0 0.0 0.03364608351922649 0.0 8.18376680032854e-05 4.087046754512594 -0.04074366094460613 TLQTDSIDSFETQRT(ph)PR ddPTM_A549_MK2206_60min_R1 4 TLQTDSIDSFETQRTPR 17 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TLQTDSIDSFET(0.013)QRT(0.987)PR;TLQTDSIDS(0.001)FET(0.155)QRT(0.844)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR 279.86 7.756899999999999e-116 677858000.0 18225.44 18547.010000000002 17312.559999999998 16749.629999999997 26291.300000000003 21021.5 18713.39 20336.54 25957.1 25301.08 27266.8 True False 21301.44870277286 19490.973588315188 19767.74133501369 20853.290101919465 22423.88459787451 23245.98117705763 22113.370732956344 23219.30682304174 20077.85829497113 19585.548455636785 20495.70103460357 1.0393130084601117 0.95097862500082 0.9644823224948078 1.0174470278773176 1.0940774633673434 1.1341881469587534 1.0789272684853086 1.1328866860342965 0.9796131520982384 0.9555930008234339 1.0 14.323033716282291 -4.8918669826291605 19.543697238524178 1.0176409082868236 3.8529533467906627 0.0 0.0669738080338024 3074.8139240313685 543739.0193224086 0.009716614234221975 8404.319106807648 1.2827233999129438e-05 4.8918669826291605 2.835312438503839 TLQTDSIDSFETQRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 TLQTDSIDSFETQRTPR 17 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.038)QRT(0.962)PR 226.99 4.5536999999999997e-64 1048720000.0 6140.4 6798.6 6438.299999999999 5599.0 7212.1 6464.1 6003.9 6823.799999999999 6319.3 7017.6 6426.6 True False 6763.768887676434 7371.541881688777 6875.241754643034 5944.837513748396 6705.546976394298 6411.4585127655255 6232.3816999601395 6687.693955832459 6053.721796957709 6574.507538368893 5636.168941573944 1.2000649657225497 1.3078993830923415 1.2198430930502004 1.0547656706841464 1.1897349149583374 1.137556127083564 1.1057833369735186 1.1865673341517808 1.0740845172868718 1.1664851792985664 1.0 12.460499141078627 -2.0000000000134337 0.07516196790695598 0.8330249137208141 1.939432192997963 0.1798363155309891 0.07475119139081106 75.52464527995875 0.404673307043618 0.9485811646964768 8.742598225326555 0.009999999999690678 2.0000000000134337 1.1064072792771489 TLRES(ph)DSAEGDEAESPEQQVR ddPTM_A549_MK2206_60min_R1 2 TLRESDSAEGDEAESPEQQVR 21 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 T(0.001)LRES(0.812)DS(0.187)AEGDEAESPEQQVR;T(0.001)LRES(0.565)DS(0.434)AEGDEAESPEQQVR 257.36 5.695699999999999e-99 72879000.0 4194.0 4994.5 4924.8 3826.8 5277.2 3658.3 3720.7 3403.0 5690.9 4925.9 5672.1 True False 4901.84466654464 5248.698716765683 5623.210693662605 4764.366171791578 4500.930870664567 4045.4188778169946 4396.70302847911 3885.385671250421 4401.920236499886 3813.135768813869 4263.561028003831 1.1497066969015919 1.2310598305715086 1.3189000126252097 1.1174617040775 1.0556740811499234 0.9488356918655463 1.031227886642358 0.9113005878725585 1.0324515604648996 0.894354682334441 1.0 12.05784319196111 -6.623086785009793 2.614454139001245 1.0049425413546946 1.2323151817466589 0.7536230072401291 0.06254711100841082 0.08917358573038911 1.2296602741734934 0.007396754476203973 0.017220962775865628 2.3818434583313948e-07 6.623086785009793 0.22737264039196425 TLRES(ph)DSAEGDEAESPEQQVR ddPTM_A549_PD325901_60min_R1 1 TLRESDSAEGDEAESPEQQVR 21 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3;Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 T(0.07)LRES(0.475)DS(0.455)AEGDEAESPEQQVR 202.29 2.8417999999999997e-56 18173000.0 2536.6 2092.6 2267.2 2889.9 3189.7 3123.6 2686.2 3834.7 4423.2 5384.8 5977.0 True False 2794.1137646537745 2268.950745980339 2421.0658257811356 3068.402559560902 2965.6664758676225 3098.162437226281 2788.424810945042 3758.2139002360436 4237.308286092338 5044.802809024282 5241.866891324722 0.5330379085508689 0.4328516524781366 0.4618709089671838 0.5853644556749621 0.565765315554997 0.5910417989349811 0.5319526170265557 0.7169609564973654 0.8083586199231945 0.9624057446734139 1.0 12.35586500390188 -8.79034971453164 0.4592436166377396 0.9963588302645581 0.4736505063369488 0.9320481781927317 0.04809362466858136 0.1427354229062315 0.07408210923646677 0.023341163529736062 0.02160281225654347 1.6205046645542658e-09 8.79034971453164 -0.5227083239276094 down TLRFS(ph)LCSDNLEGISEGPSNR ddPTM_A549_PD325901_60min_R1 1 TLRFSLCSDNLEGISEGPSNR 21 1 Q14C86-3;Q14C86-5;Q14C86-2;Q14C86;Q14C86-6;H0Y7I9;C9IZ08;B4DGD8;A0A0A0MQV8 Q14C86-3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 T(0.214)LRFS(0.785)LCS(0.001)DNLEGISEGPSNR 116.2 3.8585e-15 3645300.0 1324.2 1329.2 1405.6 1018.2 1476.6 1201.7 1027.6 1253.2 1397.3 1490.7 1463.5 True False 1458.6318091754833 1441.216348827805 1500.9924685594412 1081.0919015000213 1372.8887099934575 1191.9137536223654 1066.7058803242967 1228.2039428836192 1338.5763402416414 1396.576947595547 1283.4987778908715 1.1364497063038905 1.1228809669738098 1.1694537575064696 0.8423006863135014 1.0696455139984453 0.9286442450541289 0.8310922446511223 0.9569186695307055 1.0429120489240178 1.0881015016551032 1.0 10.325866206885026 -6.224155744226634 24.994828790457827 0.9900807230256857 1.1409234706431142 0.46287539964981494 0.08089170929736199 429.21209570601656 287741.92723924265 0.011026120155871502 0.029171573689551245 5.968212195578719e-07 6.224155744226634 0.15084274761742844 TLRIT(ph)TR ddPTM_A549_MK2206_60min_R1 1 TLRITTR 7 1 P60866;P60866-2;G3XAN0 P60866 RPS20 40S ribosomal protein S20 1 T(0.004)LRIT(0.968)T(0.027)R 44.203 0.046120999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TLRIT(ph)TR ddPTM_A549_PD325901_60min_R1 2 TLRITTR 7 1 P60866;P60866-2;G3XAN0 P60866 RPS20 40S ribosomal protein S20 1 T(0.001)LRIT(0.963)T(0.036)R;TLRIT(0.984)T(0.015)R 54.416000000000004 0.016837 11673700.0 1062.97 975.47 1216.99 1037.63 1288.12 1195.19 1487.69 1069.24 1071.66 1233.48 1207.17 True False 1170.8819318828446 1057.676280312263 1299.582259755374 1101.7220484712893 1197.6468949727564 1185.4567689039818 1544.3048570452054 1047.9131693974473 1026.6218569980376 1155.5978622929858 1058.6957428811227 1.1059664117439632 0.9990370580256749 1.2275313927481237 1.0406408601144228 1.1312474835437552 1.1197331970731206 1.4586861876317283 0.9898152292042548 0.9697043403652502 1.0915297148056484 1.0 10.04807231940766 -8.460629718701659 24.999998301569462 0.9853799409169833 1.1505435539035638 0.24193844882285243 0.11714319691106888 193.0900115914685 77547.3649800387 0.017852558283751065 0.02158267751627097 3.4623445296510803e-09 8.460629718701659 0.16516361298658044 TLRRS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TLRRSPR 7 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YEX0 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 T(0.001)LRRS(0.999)PR;T(0.001)LRRS(0.999)PR 43.123999999999995 0.030146 79824000.0 2070.62 2818.3 2449.8 2830.3 2814.1000000000004 3372.4 3201.3999999999996 2879.3 3109.8 3093.9 3168.8 True False 2280.827818090121 3055.8080318247094 2616.0581598441363 3005.1212029223248 2616.447324117967 3344.9362925156556 3323.231028873298 2821.8701027328475 2979.1059206208083 2898.550625991723 2779.057688678231 0.8207198531293977 1.0995842383099668 0.9413471949509548 1.0813453837842473 0.9414872295660749 1.2036224746765032 1.195812178499211 1.0154053707589563 1.071984195490999 1.0429976454969976 1.0 11.440380067493532 -5.253365600142019 24.482251603579677 1.048602305982005 0.8207197023011389 0.3985153094894962 0.08333552978230996 600.6224673220258 1821219.9355695152 0.011217413093501712 0.1686861676644221 5.580002581511277e-06 5.253365600142019 -0.2278826036808662 TLRS(ph)SLEGPTILDIEK ddPTM_A549_PD325901_60min_R1 2 TLRSSLEGPTILDIEK 16 1 Q7L576-2;Q7L576;A0A0G2JR96;A0A0G2JQT1 Q7L576-2 CYFIP1 Cytoplasmic FMR1-interacting protein 1 1 T(0.088)LRS(0.456)S(0.456)LEGPTILDIEK;T(0.098)LRS(0.451)S(0.451)LEGPTILDIEK 95.206 1.6842e-06 9661300.0 2481.1 2275.2 2836.1 2285.5 2586.2 2542.0 2825.3 2240.7 2935.9 2785.1 2942.7 True False 2732.9794455107167 2466.939088815094 3028.5748008547453 2426.670144252897 2404.5542339056483 2521.2987947974134 2932.818337563484 2196.0074807048554 2812.514332867269 2609.248310691862 2580.766555312241 1.0589797205350329 0.9558939314899113 1.1735175328511358 0.9402904494627178 0.9317209373145828 0.976957326732083 1.1364136486992908 0.850912871675511 1.0897980396863092 1.0110361610665615 1.0 11.33358393220589 TLS(ph)ADASVNTLPVVVSR ddPTM_A549_MK2206_60min_R1 1 TLSADASVNTLPVVVSR 17 0 Q92615;H0Y4V9;H0Y641 Q92615 LARP4B La-related protein 4B 1 T(0.26)LS(0.738)ADAS(0.002)VNTLPVVVSR 161.99 2.0037e-22 6136800.0 4377.2 3864.5 4150.5 3485.1 4723.6 4589.7 4275.1 4421.7 6059.2 5912.1 5609.2 True False 5115.964347734673 4061.186543385916 4739.103310600765 4338.949656452081 4028.764697315081 5075.379007603716 5051.830332209274 5048.4895158883255 4686.800874554134 4576.552503868226 4216.2808339555195 1.213383204110508 0.963215379459413 1.124000866459068 1.0290940825166714 0.9555257004869574 1.2037573414772351 1.198172164321863 1.1973798033638254 1.11159599161643 1.0854477403429308 1.0 12.041755248473425 -10.531832666422078 1.0316015425295713 1.004916954555327 1.106282511220048 0.04802272843657074 0.09220821786472533 0.7229370241749931 1.461910811685954 0.04739687848264487 0.016168488409143252 2.938781745874788e-11 10.531832666422078 0.10136555666472113 TLS(ph)ADASVNTLPVVVSR ddPTM_A549_PD325901_60min_R1 2 TLSADASVNTLPVVVSR 17 0 Q92615;H0Y4V9;H0Y641 Q92615 LARP4B La-related protein 4B 1 T(0.022)LS(0.974)ADAS(0.004)VNTLPVVVSR;T(0.155)LS(0.786)ADAS(0.053)VNT(0.006)LPVVVSR 170.79 8.019299999999999e-30 15146500.0 5523.200000000001 5262.1 5672.200000000001 5776.1 6608.1 6940.9 5892.6 6776.9 6965.799999999999 7625.200000000001 7433.2 True False 6083.911198035057 5705.555634341559 6057.1496017094905 6132.876578525116 6143.969852707415 6884.375611648056 6116.846117554444 6641.729413124794 6673.051650222016 7143.743570675228 6518.963522937082 0.9332635742827389 0.8752243534215932 0.9291583823712631 0.9407747960157297 0.9424764889525389 1.0560537096772002 0.9383157454451492 1.0188321179825224 1.023636905888915 1.095840396335989 1.0 12.670426887280103 -6.875285929424678 1.4464630759551476 1.0091815147066623 0.908924184542947 0.5690882713507419 0.04122476249689696 0.17590692354428467 0.7365694100023754 0.004595780792825118 0.011200786611608022 1.3326437614995798e-07 6.875285929424678 -0.1002573301637153 TLS(ph)APPAQR ddPTM_A549_PD325901_60min_R1 1 TLSAPPAQR 9 0 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 T(0.113)LS(0.887)APPAQR 50.353 0.028312999999999998 6045000.0 4782.6 4713.7 4433.8 4442.4 5531.5 4590.2 4638.9 4796.4 4813.5 5534.9 5557.3 True False 5268.126031235966 5110.940041731592 4734.704330605329 4716.796958577584 5142.986522639042 4552.818933075962 4815.435878003484 4700.732039296988 4611.205334397153 5185.425469408058 4873.787330627218 1.0809101164777333 1.0486588139810882 0.9714630551998276 0.9677888341448352 1.055234086707099 0.9341439468369357 0.9880274930633413 0.964492646151641 0.946123624520918 1.0639416777220632 1.0 12.250827584606517 -5.65334752933749 3.563728315451976 0.9763029556586713 1.0750627143139195 0.3339251108450171 0.04006538532189738 0.12535377723930857 2.955763813161845 0.0043139607884831385 0.02013890333501563 2.221531474442127e-06 5.65334752933749 0.09875975865524822 TLS(ph)ASAAEVAPR ddPTM_A549_PD325901_60min_R1 2 TLSASAAEVAPR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 T(0.023)LS(0.962)AS(0.015)AAEVAPR;T(0.081)LS(0.791)AS(0.128)AAEVAPR 160.38 5.6934e-14 14348800.0 4083.7000000000003 4584.700000000001 4625.5 4168.3 4558.2 4713.2 4345.5 5003.299999999999 5628.0 7182.299999999999 7311.3 True False 4498.274217738954 4971.068759006048 4939.414245391076 4425.766424103849 4238.047756936325 4674.81726185648 4510.870380448841 4903.50525648708 5391.474731897201 6728.808352261016 6412.056450149315 0.7015337829151838 0.7752690260377056 0.7703323081748685 0.690225742476236 0.6609498512505508 0.7290667663644196 0.7034982326682102 0.764732078485194 0.8408339467709539 1.0493994250634404 1.0 12.646571411338575 -9.443466773529815 0.6468378129396315 0.9843248953339168 0.7153027825314383 0.8795180854776052 0.04197263208367674 0.15467590068750445 0.14282841858296794 0.016747024115674403 0.010336811684072744 3.601913064158183e-10 9.443466773529815 -0.26902211280247845 TLS(ph)DAT(ph)T(ph)K ddPTM_A549_PD325901_60min_R1 1 TLSDATTK 8 0 Q9NUQ9;A0A087X178;A0A1W2PRQ0;Q9NUQ9-2 Q9NUQ9 FAM49B Protein FAM49B 3 T(0.001)LS(0.999)DAT(1)T(1)K 62.303000000000004 0.026674 2078200.0 592.42 434.3 818.01 558.7 550.68 850.05 726.97 777.94 738.99 773.91 657.84 True False 652.5620422834462 470.8999851759824 873.5250776937311 593.2096301002375 512.0021365428671 843.1274746331792 754.6352411632477 762.423376417876 707.932820206949 725.045190523693 576.9298503913432 1.1310942601441063 0.8162170580297785 1.5140923581977972 1.0282179535308347 0.8874599506258269 1.4614037981589423 1.3080190609852538 1.321518336935953 1.2270691484012206 1.2567302420422175 1.0 9.172252100248482 TLS(ph)DDLDEAAK ddPTM_A549_MK2206_60min_R1 2 TLSDDLDEAAK 11 0 Q9H0A0-2;Q9H0A0;A0A087WV29 Q9H0A0-2 NAT10 N-acetyltransferase 10 1 T(0.112)LS(0.888)DDLDEAAK;T(0.036)LS(0.964)DDLDEAAK 156.36 3.4564000000000003e-13 8332600.0 4234.4 4920.6 4194.5 3971.7 6349.1 5721.5 5188.5 5680.799999999999 6760.0 5592.1 7086.9 True False 4949.063198859472 5171.037522418104 4789.343172223805 4944.766678296386 5415.155800601913 6326.945332375681 6131.183288968163 6486.070796720359 5228.870793501771 4328.840726117877 5327.027141510261 0.929047866171819 0.970717322260924 0.8990649090002538 0.9282413148911608 1.0165436850142775 1.187706607138092 1.1509577717732289 1.2175779519083694 0.9815738975227633 0.8126184851557958 1.0 12.379114916194245 -6.814490752011429 5.231308638874931 1.0378474793156574 0.9320373906165482 0.22203574393849335 0.10687739548783429 0.2525359085448434 14.617492868667693 0.014528717817755813 0.02827547014089543 1.5328838476742128e-07 6.814490752011429 -0.10581008869910913 TLS(ph)DDLDEAAK ddPTM_A549_PD325901_60min_R1 2 TLSDDLDEAAK 11 0 Q9H0A0-2;Q9H0A0;A0A087WV29 Q9H0A0-2 NAT10 N-acetyltransferase 10 1 T(0.005)LS(0.995)DDLDEAAK;T(0.001)LS(0.999)DDLDEAAK 169.23 5.1049e-15 12521400.0 8182.6 7966.700000000001 8610.8 8499.3 9968.8 7848.6 7721.5 8019.700000000001 8051.7 8540.4 9746.3 True False 9013.291528288255 8638.08176813608 9195.180668946807 9024.282457689194 9268.62587849301 7784.683603795038 8015.345907866924 7859.7407921670565 7713.31504954099 8001.157686486217 8547.56688688609 1.054486223689772 1.0105895493358303 1.075765863038089 1.0557720784302367 1.084358391241511 0.9107484863018166 0.9377342130149675 0.9195296037081248 0.9023989108964995 0.936074299548543 1.0 13.061298091820763 -7.259666880517507 24.99447713868049 0.9459266896153273 1.0547246576954572 0.795554142665067 0.0304318092149052 81.6227681064195 1150981.8604238767 0.006159105182257987 0.010323257037683749 5.499625531673029e-08 7.259666880517507 0.10879796808012987 TLS(ph)DES(ph)LCSGR ddPTM_A549_MK2206_60min_R1 2 TLSDESLCSGR 11 0 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 2 T(0.104)LS(0.896)DES(0.961)LCS(0.039)GR;T(0.011)LS(0.989)DES(0.998)LCS(0.002)GR 105.25 0.00020596 7525300.0 1607.58 1550.16 1573.6100000000001 1208.7 1904.62 1916.26 1546.51 2065.58 1948.05 1519.96 2267.8999999999996 True False 1878.900202442497 1629.0565227313025 1796.7715601962332 1504.8315542606042 1624.4529210348571 2119.0373612895587 1827.4908486503136 2358.382290573448 1506.819785396616 1176.5999803419343 1704.717839144213 1.1021766531086021 0.955616516308122 1.0539993886015953 0.8827452377784971 0.9529160097546409 1.2430428735076409 1.0720195487411184 1.3834443662285962 0.8839115487599144 0.6902021867340816 1.0 10.735317252208121 TLS(ph)DESICSNR ddPTM_A549_MK2206_60min_R1 2 TLSDESICSNR 11 0 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 T(0.062)LS(0.896)DES(0.042)ICSNR;T(0.074)LS(0.923)DES(0.003)ICSNR 107.09 0.00014503 11485400.0 9932.5 11834.1 9366.599999999999 9761.3 12359.4 10957.7 9879.7 11375.8 13636.7 13282.9 14005.099999999999 True False 11608.863173689719 12436.405142472062 10694.924724508639 12152.818938201402 10541.348632398178 12117.236540867416 11674.713605091796 12988.354486926388 10548.00922333514 10282.283664625307 10527.24714890366 1.1027444316151256 1.1813539633452252 1.0159279603901425 1.1544156574178117 1.0013395224121804 1.151035628733134 1.1089996691402497 1.2337845120582198 1.0019722225704222 0.9767305278565761 1.0 13.361840603771384 -8.9199125440346 24.99999357102614 1.0008685860678903 1.115551787054664 0.43313098578373754 0.0638450645406522 20.12666990328734 6281.4923319372565 0.010143453062235401 0.010798505327677791 1.2025065647587893e-09 8.9199125440346 0.11468320098677376 TLS(ph)DESICSNRR ddPTM_A549_MK2206_60min_R1 1 TLSDESICSNRR 12 1 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 T(0.428)LS(0.567)DES(0.005)ICSNRR 94.71700000000001 0.00010918 9304900.0 1375.8 1373.3 1306.2 1624.5 2044.9 1531.8 1132.6 1204.2 1908.7 2279.1 2378.6 True False 1608.0014049194372 1443.195104161439 1491.4388011822002 2022.502572926575 1744.0979188626497 1693.894059273452 1338.3787593881361 1374.899037707833 1476.3824975675775 1764.2497270963054 1787.927973979639 0.8993658739732594 0.8071886145106392 0.834171634924699 1.1311991323816086 0.9754855588396938 0.9474062064721306 0.7485641361766499 0.7689901705869783 0.8257505442355088 0.9867565991315468 1.0 10.804072903915207 TLS(ph)DESICSNRR ddPTM_A549_PD325901_60min_R1 2 TLSDESICSNRR 12 1 Q9P2F8;Q9P2F8-2 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 T(0.16)LS(0.834)DES(0.006)ICSNRR;T(0.206)LS(0.787)DES(0.007)ICSNRR 74.789 0.00055954 19908000.0 4005.5 4004.4 4317.1 3208.4 4215.8 3728.1 3791.0 3448.1 3619.9 4475.2 4893.7 True False 4412.135411306751 4341.864841443023 4610.084366831219 3406.575581194923 3919.696751720451 3697.739589647615 3935.268579514798 3379.3249405178794 3467.7681915413405 4192.635108257592 4291.80592372023 1.0280370291027086 1.0116638353673273 1.0741595609791923 0.7937394285159172 0.9132977635490968 0.8615812679717667 0.9169260328769999 0.7873899706976051 0.8079974381822477 0.9768929869557862 1.0 12.067369123287522 -6.246889665930775 24.970713674151575 0.8900348617592796 1.0353245185151192 0.5098812230250687 0.06766938375569968 642.9157083177952 1103392.0404021614 0.01143983878468466 0.03011959480035233 5.663831624334975e-07 6.246889665930775 0.1452896567558396 TLS(ph)DESIYNSQR ddPTM_A549_MK2206_60min_R1 2 TLSDESIYNSQR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 T(0.046)LS(0.95)DES(0.004)IYNSQR;T(0.257)LS(0.515)DES(0.227)IYNSQR 208.87 2.13e-31 43868000.0 9335.3 10397.7 9505.6 9181.9 12342.1 8468.099999999999 9223.8 9016.9 13439.900000000001 13432.5 13406.099999999999 True False 10910.870413827903 10926.898517832513 10853.637014635975 11431.46591219115 10526.593439481006 9364.188721330145 10899.645065198918 10295.073188098126 10395.784109110124 10398.088920723589 10076.995380462648 1.0827503637623948 1.0843409275564087 1.0770707542130153 1.1344121417733861 1.0446162811476567 0.9292639688498322 1.081636405860742 1.0216411538759151 1.0316352957018862 1.031864015823951 1.0 13.298777919589657 -6.991131350030567 23.09058478934484 1.014884356024464 1.0922602207656924 0.5005844719715302 0.036659917397862014 47.834454887513765 124539.50428884936 0.0049793485561821045 0.009396500478373059 1.0206307527404528e-07 6.991131350030567 0.07737586474122837 TLS(ph)DESIYNSQR ddPTM_A549_PD325901_60min_R1 1 TLSDESIYNSQR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 T(0.038)LS(0.954)DES(0.009)IYNSQR 219.89 2.2821999999999998e-32 28049000.0 9805.0 10751.0 7989.8 9141.9 10184.0 10462.0 8981.1 10409.0 11928.0 10970.0 12771.0 True False 10800.396381940502 11657.024500637777 8532.035874570453 9706.574400238702 9468.710972892706 10376.800940665042 9322.880675146494 10201.384329297469 11426.70764073735 10277.352327848086 11200.247962039166 0.9642997564470113 1.0407827166100927 0.7617720521445557 0.8666392416611712 0.8454019058314484 0.9264795722233096 0.832381631794617 0.9108177215248153 1.0202191665278948 0.9176004283727435 1.0 13.451243051979139 -8.699159753390694 5.0499120645398206 1.0096020453376002 0.8895497288567874 0.18124969501351174 0.07429054448921267 0.15496312576967666 7.8112714430054035 0.01179595657419361 0.013272680883352077 1.999126364176064e-09 8.699159753390694 -0.12005231648081283 TLS(ph)DESLCSGR ddPTM_A549_MK2206_60min_R1 2 TLSDESLCSGR 11 0 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.023)LS(0.973)DES(0.003)LCSGR;T(0.192)LS(0.797)DES(0.011)LCSGR 119.39 1.3939000000000002e-05 206900000.0 4255.3 4584.5 3900.2 3113.3 5441.700000000001 4127.6 3547.8 4090.0 5499.8 5134.299999999999 5324.3 True False 4973.490607903531 4817.831468017272 4453.30700686787 3876.058639761346 4641.233138576402 4564.379892320867 4192.38933653296 4669.77002509968 4254.1040813758955 3974.458064073787 4002.1293667955083 1.242711105035015 1.20381702500409 1.1127343967977772 0.9684990874907408 1.1596909328027598 1.1404878438438761 1.0475396850776446 1.1668213586105913 1.0629601623253229 0.9930858550072614 1.0 11.966552087042631 -2.0000000000000004 0.10342877505790515 0.9480977843330525 1.6681012146135912 0.44385995708158776 0.06509862846186883 75.08943574347617 0.5301141372314213 0.38947985051206785 7.720191292604689 0.00999999999999999 2.0000000000000004 0.7200034302805387 TLS(ph)DESLCSGR ddPTM_A549_PD325901_60min_R1 2 TLSDESLCSGR 11 0 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.001)LS(0.996)DES(0.003)LCSGR;T(0.025)LS(0.974)DES(0.001)LCSGR 240.33 5.0789e-50 341720000.0 24100.0 34433.0 27142.0 35633.0 35760.0 25177.0 24876.0 26022.0 25743.0 25959.0 33514.0 True False 26546.6142585177 37334.789752624005 28984.01933810497 37833.9694815854 33248.340965302756 24971.96685940773 25822.669792669516 25502.970796135905 24661.111233693962 24319.94430980934 29391.99046275 0.9031921227710524 1.2702368626561829 0.9861196496657116 1.287220391879698 1.1312041288064552 0.8496180920804259 0.8785614511339723 0.8676843723277996 0.8390418901689654 0.8274344107668132 1.0 14.843135442979017 -7.252217776169534 24.262138579681523 0.9090956580978943 1.126527594588738 0.5108626904204772 0.11366379197445799 301.6477702065119 793637.4939661599 0.01622868651787587 0.027844737126196326 5.594769824387462e-08 7.252217776169534 0.2174319364908438 TLS(ph)DESLCSGRR ddPTM_A549_MK2206_60min_R1 1 TLSDESLCSGRR 12 1 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.16)LS(0.839)DESLCSGRR 127.71 3.8502e-08 11740000.0 1061.4 1442.4 1254.9 974.15 1852.6 1238.1 828.48 768.56 2215.1 1616.7 2532.2 True False 1240.5383712614407 1515.8119990114753 1432.8636897898803 1212.816793731256 1580.0849941243794 1369.1149202157349 979.0040919811786 877.5057336162862 1713.3833867878361 1251.4863471530864 1903.3848548352987 0.6517538311340537 0.7963770412277656 0.7527976731294665 0.637189473610791 0.8301447760868651 0.7193053557916459 0.5143489975209941 0.4610238078689648 0.9001770621612393 0.6575056767809464 1.0 10.89435158144291 -8.935409679588911 8.865833586570101 0.9561918751395265 0.6776718089877777 0.16837393414752921 0.13876214556854452 0.16044199151728167 20.25235257104896 0.019881620203395445 0.021089511687216747 1.1603535102771594e-09 8.935409679588911 -0.27852006615174885 TLS(ph)DPPS(ph)PLPHGPPNK ddPTM_A549_MK2206_60min_R1 2 TLSDPPSPLPHGPPNK 16 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 2 T(0.479)LS(0.531)DPPS(0.99)PLPHGPPNK;T(0.473)LS(0.535)DPPS(0.992)PLPHGPPNK 50.883 0.0070607 14928200.0 3268.7 4539.3 3316.7 4435.700000000001 7161.6 4276.9 3697.7 3283.6 6009.1 4824.1 6626.7 True False 3820.376647957671 4770.330981082081 3787.05793284413 5522.446699126143 6108.138126914153 4729.47871922355 4369.524226195933 3749.0603556032524 4648.048444560874 3734.3324595170434 4981.107502384126 0.7669733379833923 0.9576848078060632 0.7602843205113554 1.1086784809368027 1.2262610521837949 0.9494833662915049 0.8772194183933054 0.7526559813874376 0.9331355411093137 0.7496992300868163 1.0 12.282250832288295 -3.2017851431879647 0.009508687750090094 1.7903994666021046 3.343130854842871e-07 0.0 0.15516061381482896 34239.589817219494 29.87208788603484 2496.7898529188697 3164.214595649643 0.0006283691525435935 3.2017851431879647 -1.7903991322890191 TLS(ph)DPPS(ph)PLPHGPPNK ddPTM_A549_PD325901_60min_R1 2 TLSDPPSPLPHGPPNK 16 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 2 T(0.117)LS(0.883)DPPS(1)PLPHGPPNK;T(0.203)LS(0.798)DPPS(0.999)PLPHGPPNK 71.742 0.00036332 19912700.0 4446.1 5022.700000000001 5312.5 4689.6 5217.1 5159.6 4235.700000000001 5073.4 5427.8 6580.200000000001 6244.299999999999 True False 4897.464798954174 5445.9805561671865 5673.03819665768 4979.265941145649 4850.668894017926 5117.58192825993 4396.891881363979 4972.207056994696 5199.688441682948 6164.72504901604 5476.290685879029 0.8943032939399298 0.9944652080303189 1.035927148879437 0.9092406204778372 0.88575811114733 0.9344978602863333 0.8028959990567429 0.9079516304377075 0.9494909492461169 1.125711800674165 1.0 12.418983312694287 -9.643257941457973 1.1855159241263278 0.9894723365203781 0.923786424127169 0.2783342773998888 0.07026986558180831 0.5313027273407142 1.5315989298583168 0.01665238615063339 0.011771170101410839 2.2737465784469425e-10 9.643257941457973 -0.06568591239320909 TLS(ph)DYNIQK ddPTM_A549_MK2206_60min_R1 2 TLSDYNIQK 9 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;A0A2R8Y422;M0R1M6;P62987;M0R2S1 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 1 T(0.002)LS(0.998)DYNIQK;T(0.008)LS(0.992)DYNIQK 127.42 5.2018e-05 10425500.0 6155.9 5856.200000000001 5516.5 5452.5 6867.0 4960.1 5712.8 5684.9 8637.4 7987.6 7944.799999999999 True False 7194.865422694838 6154.255566147394 6298.8226509888245 6788.362744772022 5856.873396659894 5484.974489752095 6750.741812319036 6490.7519842760785 6681.042691093516 6183.195612370871 5971.886894674784 1.204789298523152 1.0305378642779104 1.0547458051500562 1.1367199118967408 0.98074084455326 0.9184659030704557 1.1304202392611904 1.0868846143191315 1.1187490334170755 1.0353839115547405 1.0 12.543971126283733 -11.066004462733991 1.4057309091486831 1.000342864196445 1.0745496872097977 0.06991659502338587 0.07541872772756154 0.7650790286097242 2.7182974477385407 0.05261497401705492 0.011882791693668092 8.590046944783333e-12 11.066004462733991 0.0742068230133528 TLS(ph)DYNIQK ddPTM_A549_PD325901_60min_R1 1 TLSDYNIQK 9 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;A0A2R8Y422;M0R1M6;P62987;M0R2S1 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 1 T(0.369)LS(0.631)DYNIQK 141.1 4.0105e-05 9012900.0 5687.1 5497.4 5010.9 5172.1 5779.1 6308.9 6018.7 5688.1 5856.4 5345.8 6329.4 True False 6264.45020537826 5960.685191126977 5350.969806989545 5491.5688703086425 5373.195952812673 6257.522410109124 6247.7449220590115 5574.646383271874 5610.27587417959 5008.2652756800635 5550.923925372379 1.1285418949347275 1.0738185698927787 0.963978227575976 0.9893071755510043 0.9679822719696553 1.127293851300501 1.1255324349702536 1.0042736052985817 1.0106922648562922 0.9022399411363016 1.0 12.438512205965496 TLS(ph)FDTSK ddPTM_A549_PD325901_60min_R1 1 TLSFDTSK 8 0 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 T(0.117)LS(0.574)FDT(0.185)S(0.124)K 94.804 0.0025258000000000004 14277000.0 7819.3 7771.1 8831.2 8661.9 9747.4 8608.3 9096.6 8789.4 8342.7 9210.2 9042.5 True False 8613.109579735581 8425.997869677818 9430.538338319679 9196.925890397793 9062.776250704479 8538.196858872772 9442.776090850519 8614.088521849084 7992.085331520748 8628.666400177432 7930.329825130301 1.0860972708148442 1.062502828441864 1.1891735332918172 1.159715433430498 1.142799410685995 1.076650914545346 1.1907166913698153 1.0862207136142092 1.0077872557323846 1.088058957249695 1.0 12.95316515401941 -8.653646419554937 3.537268336535801 1.0033245570621119 1.1295631482283985 0.4134852450303953 0.04763118936215225 0.09989360830874147 2.429864399565967 0.006884453981448261 0.007764893769626214 2.2200030976874387e-09 8.653646419554937 0.12623859116628666 TLS(ph)FGSDLNYATR ddPTM_A549_PD325901_60min_R1 2 TLSFGSDLNYATR 13 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 T(0.014)LS(0.924)FGS(0.051)DLNY(0.004)AT(0.006)R;T(0.002)LS(0.997)FGSDLNYATR 96.734 0.00016552 3520400.0 3288.5 2859.0 2826.6000000000004 3598.8 3504.6 3162.5 2861.6 3549.8999999999996 3064.4 3470.7 3624.6000000000004 True False 3622.346099134252 3099.937963661375 3018.4300737266044 3821.0897025321924 3258.4489862136497 3136.745648523535 2970.4997539276046 3479.0944596573217 2935.613924738056 3251.5594096866307 3178.797178232492 1.1395335707289092 0.9751921213749896 0.9495510108024392 1.2020552077678748 1.025057216146595 0.9867712447975875 0.9344728799524393 1.0944688398118574 0.9234983423416611 1.0228898628551686 1.0 11.634265253546628 -7.193880145952224 4.021668490668002 0.97273336770593 1.057498254206218 0.12076556299350616 0.07896555774063185 0.2860362634322389 9.160485666560966 0.01141015123852703 0.02006441534194957 6.399114101199906e-08 7.193880145952224 0.0847648865002879 TLS(ph)GSRPPLLR ddPTM_A549_MK2206_60min_R1 1 TLSGSRPPLLR 11 1 O00418;H3BRH4 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 T(0.168)LS(0.815)GS(0.017)RPPLLR 70.622 0.00082045 4177500.0 409.59 344.16 581.75 351.57 628.94 604.36 461.68 934.01 717.28 856.96 857.21 True False 478.7187784859372 361.67627397378646 664.2508977091906 437.7046657825771 536.4237591517798 668.3129740582998 545.5612799172833 1066.4087777856605 554.8172252607915 663.3721408154319 644.3410992075537 0.74295862715368 0.5613118182568145 1.0308994700572771 0.6793058309036789 0.8325152001191657 1.03720370294589 0.8466963857935567 1.6550376486882319 0.8610613632176131 1.0295356630692711 1.0 9.331680809571884 -7.1037085151215456 4.162781040786852 0.9917795360717693 0.7588655967432699 0.26327155323923046 0.2339093735563913 0.317950236291552 9.544455263479145 0.03447868344073793 0.06162895803270311 7.875742075318423e-08 7.1037085151215456 -0.23291393932849935 TLS(ph)GSRPPLLR ddPTM_A549_PD325901_60min_R1 1 TLSGSRPPLLR 11 1 O00418;H3BRH4 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 T(0.408)LS(0.545)GS(0.047)RPPLLR 71.87899999999999 0.00063548 8103700.0 1011.5 847.29 742.16 1058.2 959.67 775.27 950.78 895.61 841.17 890.29 992.91 True False 1114.1867353730568 918.6941018645131 792.5274405706284 1123.56261065343 892.2660898817707 768.956458159949 986.962453186779 877.7463559575472 805.8185501474707 834.0769374621576 870.7883645750769 1.279514955297723 1.055014213830031 0.9101263553944731 1.2902820666439436 1.024664690274283 0.8830578007724995 1.1334125412532265 1.007990450568165 0.9253896617471342 0.9578411602561622 1.0 9.766178320220018 -2.000000000000797 0.3359135231639492 0.970693862492945 3.5141075880182266 0.27601066690090004 0.1127459207981381 48.550320033133175 0.6021240454392351 0.030548725695160494 78.36866347600801 0.009999999999981645 2.000000000000797 2.5434137255252818 TLS(ph)INEEEPEGGFSK ddPTM_A549_MK2206_60min_R1 2 TLSINEEEPEGGFSK 15 0 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2 E9PP16 PPFIBP2 Liprin-beta-2 1 TLS(1)INEEEPEGGFSK;T(0.001)LS(0.999)INEEEPEGGFSK 150.39 5.474400000000001e-14 23101000.0 5577.6 6622.9 5058.6 4923.1 6945.0 5410.7 4493.3 4642.0 8161.6 7676.0 7966.0 True False 6518.962520772392 6959.977321306925 5775.985545598124 6129.259721006355 5923.399699985871 5983.256682668022 5309.674447782721 5300.017715528781 6313.010631397049 5941.986268786473 5987.822349584546 1.0887033950205116 1.1623553463956442 0.9646220626433382 1.0236208362847676 0.9892410552889658 0.9992375079536485 0.8867454873892714 0.8851327588061314 1.054308271492902 0.9923451167850273 1.0 12.54781570392493 -5.761806729160148 24.99996194007085 1.0001220923104572 1.1255293889985725 0.4811712135595947 0.05536440178796347 7.131529526996699 485530.2640211462 0.008599518511726764 0.029403721073021315 1.73058633782675e-06 5.761806729160148 0.12540729668811523 TLS(ph)KDDVNYK ddPTM_A549_MK2206_60min_R1 1 TLSKDDVNYK 10 1 P48651;J3KNR6 P48651 PTDSS1 Phosphatidylserine synthase 1 1 T(0.351)LS(0.649)KDDVNYK 42.788999999999994 0.020715 5114100.0 1570.3 1396.3 1650.5 1458.3 2332.0 1822.8 1486.2 1621.6 2459.9 2122.6 2424.5 True False 1835.3282498509907 1467.3657059204968 1884.5657183824987 1815.583565465575 1988.965889181721 2015.6874861232857 1756.2233023155986 1851.4667659417219 1902.7365776531078 1643.1031857902776 1822.4297372040844 1.0070776460587691 0.8051699749871751 1.0340951313018747 0.996243382338014 1.0913813841915965 1.1060440054142726 0.9636713374804465 1.0159331403262686 1.0440658088537491 0.9016002934143711 1.0 10.831647477957075 -5.797365172927426 24.999008838084986 1.0264760790564447 0.9061236767788795 0.268688372162456 0.06912381821488735 102.05451488546615 71014.65304439985 0.007362532644184495 0.02289213518427232 1.5945378294362695e-06 5.797365172927426 -0.12035240227756516 TLS(ph)KEEETKK ddPTM_A549_MK2206_60min_R1 1 TLSKEEETKK 10 2 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 T(0.013)LS(0.986)KEEET(0.001)KK 77.77600000000001 0.00028309 42713000.0 10500.0 10270.0 9665.8 8166.2 12537.0 8794.7 7964.6 8563.0 12418.0 12161.0 12367.0 True False 12272.14329964681 10792.699133283311 11036.555783545316 10166.919366594642 10692.823907663478 9725.34931655062 9411.66472454772 9776.831473087668 9605.342827471146 9413.821653818688 9295.932588163707 1.3201626822544563 1.1610130593056798 1.187245677491025 1.093695470591078 1.1502690887924898 1.0461940450099305 1.0124497607191527 1.0517321829050565 1.0332844753738215 1.0126817900772094 1.0 13.182383891369831 -2.000000000114494 0.28106396637406433 1.0045411085309848 3.262369742981692 0.887862288539824 0.03148636011163427 9.270404119571936 0.11533121516090175 0.010827661526915637 10.467870249187952 0.009999999997363673 2.000000000114494 2.257828634450707 TLS(ph)KEEETKK ddPTM_A549_PD325901_60min_R1 1 TLSKEEETKK 10 2 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 T(0.147)LS(0.853)KEEET(0.001)KK 43.382 0.022309 25395000.0 3547.8 3124.5 3512.1 3649.8 3802.3 3540.6 3669.5 4350.5 3570.6 3541.8 3363.1 True False 3907.9700442476815 3387.812580433703 3750.4522259729742 3875.2398567027885 3535.2395652228956 3511.7665274821898 3809.144830527448 4263.725864598776 3420.5400990959733 3318.1701435526293 2949.460020447413 1.324978137406612 1.1486212923543186 1.2715724912263962 1.3138811273376545 1.1986056907754334 1.1906472720893089 1.2914719318519958 1.4455954090037122 1.1597173975516712 1.1250093646121995 1.0 11.526235138414746 -9.56310000659857 1.1586267931211938 1.0337762560244648 1.2633113227125803 0.4411477607814207 0.08604772816154085 0.21419659968328095 0.5939869744777524 0.022743953936950036 0.01663127306105907 2.734638938362808e-10 9.56310000659857 0.22953506668811552 TLS(ph)LVK ddPTM_A549_MK2206_60min_R1 1 TLSLVK 6 0 F8VRW9;F8W0R1;F8VR88;F8VUZ2;F8VPA6;Q96RQ1;A0A087WU02 F8VRW9 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 1 T(0.135)LS(0.865)LVK 83.265 0.041194999999999996 36631000.0 1786.3 2028.8 1722.7 1729.2 1976.5 1957.8 1838.2 2108.0 2991.2 2631.0 2351.9 True False 2087.7837691580107 2132.0572542945647 1967.0047640457635 2152.8540776267373 1685.7594682537188 2164.9730965175377 2172.1771459537977 2406.8154554792477 2313.6979759648657 2036.6552726911432 1767.8583208621512 1.1809678097619485 1.2060113806262487 1.1126484180511096 1.217775232450093 0.9535602759341063 1.2246304304870546 1.2287054456346183 1.3614300575316969 1.3087575789651056 1.152046659314817 1.0 10.787786944018228 TLS(ph)LVK ddPTM_A549_PD325901_60min_R1 1 TLSLVK 6 0 F8VRW9;F8W0R1;F8VR88;F8VUZ2;F8VPA6;Q96RQ1;A0A087WU02 F8VRW9 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 1 T(0.11)LS(0.89)LVK 94.302 0.035917000000000004 66383000.0 2033.3 2166.2 2033.7 1758.8 1755.3 1517.1 2118.5 1653.1 2069.4 1788.2 2328.1 True False 2239.7191191636534 2348.7532762795618 2171.71911163157 1867.437081475386 1632.013783456262 1504.7452405929018 2199.120676787681 1620.1276236681379 1982.4303145323504 1675.2927468238786 2041.7584590418433 1.096955964230318 1.1503580484156706 1.0636513354526345 0.9146219393413153 0.7993177529050786 0.7369849425279467 1.0770719068403836 0.7934962220890867 0.9709426233809584 0.8205146595107338 1.0 10.99559648949006 -6.093953565629564 3.9766790592488594 0.9439583665419807 1.1213227103421215 0.3840222269357406 0.10695243782186854 0.2058089423308832 5.827758319623712 0.014949370862537377 0.04335997775359036 8.054645561320194e-07 6.093953565629564 0.17736434380014077 TLS(ph)MDKGF ddPTM_A549_MK2206_60min_R1 1 TLSMDKGF 8 1 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 1 T(0.472)LS(0.528)MDKGF 51.927 0.023417 4802000.0 1874.7 2149.1 1910.8 2031.5 2763.2 2201.6 2072.3 2384.5 3199.5 3850.9 3815.7 True False 2191.103527985513 2258.480010451721 2181.7801724842657 2529.217591197502 2356.7369403889074 2434.5718506961975 2448.8100857143177 2722.5101772249845 2474.8183585516153 2980.979015433795 2868.1563820373804 0.7639414439560906 0.7874326604351402 0.7606907998978945 0.8818269488502872 0.8216905309447636 0.8488281412908217 0.8537923876991734 0.9492195733382791 0.8628603286943652 1.039336290762595 1.0 11.48590797168626 -14.999999999999977 0.02782787646375948 2.084956325001079 0.0810442533946759 0.8241889677741424 0.03688013247518968 357.13073677607485 0.7694339139910629 41.43456706324474 18.348585813553356 1.0000000000000531e-15 14.999999999999977 -2.003912071606403 TLS(ph)MDKGF ddPTM_A549_PD325901_60min_R1 1 TLSMDKGF 8 1 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 1 T(0.056)LS(0.944)MDKGF 48.981 0.028522000000000002 6372400.0 2624.9 2331.3 2233.1 2026.1 3021.1 2647.6 2311.4 2848.1 3328.7 2297.1 2452.5 True False 2891.377915650752 2527.766832698063 2384.651594721179 2151.2475953930393 2808.908358229201 2626.038823408983 2399.3615918466126 2791.2924112087735 3188.8063148660644 2152.060713974462 2150.858047678415 1.3442904420269095 1.1752364761712073 1.108697804253105 1.0001811127029256 1.305947810577769 1.2209261444489405 1.1155369339396555 1.2977576154882133 1.4825740444879596 1.0005591565177188 1.0 11.070696597582875 TLS(ph)MIEEEIR ddPTM_A549_MK2206_60min_R1 3 TLSMIEEEIR 10 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 T(0.028)LS(0.972)MIEEEIR;T(0.123)LS(0.877)MIEEEIR;T(0.293)LS(0.707)MIEEEIR 211.84 2.6346e-26 46159000.0 5680.8 6308.96 6056.599999999999 5301.59 8802.34 6931.05 6449.889999999999 6801.299999999999 8669.220000000001 8685.19 7781.65 True False 6639.5801577746315 6630.059116253082 6915.516952411654 6600.47978799742 7507.527446389286 7664.489110541363 7621.751524271537 7765.405103107688 6705.655511899616 6723.199546873575 5849.251542385715 1.1351161955785147 1.1334884588582597 1.182290914025394 1.1284315164372816 1.2835022381901557 1.3103367251351397 1.303030220027583 1.3275895295042206 1.1464125731827566 1.1494119372632428 1.0 12.51403631702143 -9.683513424492643 1.0750846862557508 1.026975208599911 1.2218023377607081 0.2770075526684167 0.0829255563109275 0.2690066554895925 0.6409775387237685 0.024709425130679825 0.016520433477976822 2.0724619966437373e-10 9.683513424492643 0.19482712916079703 TLS(ph)MIEEEIR ddPTM_A549_PD325901_60min_R1 3 TLSMIEEEIR 10 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 T(0.161)LS(0.839)MIEEEIR;T(0.001)LS(0.999)MIEEEIR;T(0.146)LS(0.854)MIEEEIR 266.57 9.686899999999998e-72 72992000.0 20221.660000000003 20065.39 17764.72 17969.05 24193.45 20662.47 19871.449999999997 20887.04 21496.04 23446.190000000002 23581.23 True False 22274.54803680072 21756.370834792328 18970.340727139494 19078.957407826525 22494.185534871493 20494.201694940104 20627.668903824677 20470.43160163411 20592.63619329272 21965.793562048184 20680.888203733197 1.0770595448980689 1.0520036963821018 0.9172884907194206 0.9225405224318411 1.0876798575223172 0.9909729936667133 0.9974266434118186 0.9898236187911361 0.9957326779405662 1.0621300857901763 1.0 14.336010527465538 -5.54261905325753 24.97794228935169 0.9935180648248603 1.0707956355889 0.24388126755039674 0.047236707584284304 168.665556583979 213416.9722422678 0.005572862668321823 0.021588977812618395 2.8666914210059844e-06 5.54261905325753 0.07727757076403963 TLS(ph)NAEDYLDDEDSD ddPTM_A549_PD325901_60min_R1 1 TLSNAEDYLDDEDSD 15 0 Q92882 Q92882 OSTF1 Osteoclast-stimulating factor 1 1 T(0.084)LS(0.915)NAEDYLDDEDSD 46.746 0.030168 1086900.0 0.0 183.53 0.0 150.85 142.91 117.36 99.64399999999999 118.87 167.4 170.1 146.22 True False 0.0 198.996717198591 0.0 160.167661894793 132.87249461273538 116.40425907058396 103.436006947289 116.49904459828899 160.36476014918105 159.35985697055236 128.2358669649492 0.0 1.5518023304118411 0.0 1.2490082976439951 1.0361570265599211 0.9077355799559637 0.8066074601075629 0.9084747298517641 1.2505452955140364 1.2427089295860596 1.0 7.002656023146047 -5.084044242381528 0.4460852314901034 1.091715174504776 1.9564917769098313e-12 0.19841186783916032 0.4220274257080351 6.857137178692667 0.8059127655617182 0.08160438647243423 4.081102476162462 8.24054162816322e-06 5.084044242381528 -1.0917151745028195 TLS(ph)NESEESVK ddPTM_A549_MK2206_60min_R1 1 TLSNESEESVK 11 0 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;Q8NHM5-5 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 T(0.001)LS(0.999)NESEESVK 119.88 1.3055999999999998e-05 4375200.0 3060.2 3192.9 3364.6 3086.2 3409.0 2901.2 3071.4 2984.1 4538.0 4514.2 4288.4 True False 3576.686945293255 3355.4049720214507 3841.7508731110324 3842.3191385447835 2907.5406158749947 3208.203058339302 3629.4336231544403 3407.105313422973 3510.150245696896 3494.439084751939 3223.471926181066 1.1095759563603995 1.040928864547826 1.1918052835851616 1.1919815734511088 0.9019903639488607 0.9952632229498417 1.1259392686736776 1.05696757764522 1.0889346413062966 1.084060654094759 1.0 11.654399703503143 -14.999999999999998 0.1878493151387856 0.6658035262916858 1.0955748088228792 0.001818640317471698 0.0823142774259154 86.0421443155636 0.9792929913026803 10.678637402252903 0.08321449864399798 1.000000000000004e-15 14.999999999999998 0.42977128253119334 TLS(ph)PEFNER ddPTM_A549_MK2206_60min_R1 2 TLSPEFNER 9 0 Q9BSJ8;Q9BSJ8-2 Q9BSJ8 ESYT1 Extended synaptotagmin-1 1 T(0.001)LS(0.999)PEFNER;T(0.061)LS(0.939)PEFNER 104.82 0.00059367 65783000.0 1781.33 2102.7 1899.9099999999999 1525.8000000000002 2325.29 2020.3400000000001 1706.48 1992.3600000000001 3000.3 2637.7 2466.3999999999996 True False 2081.974954662843 2209.718448642145 2169.3458067325623 1899.6210684957641 1983.2429212930372 2234.1310378068483 2016.5253269650962 2274.783131346601 2320.736840494579 2041.8417380377894 1853.9248108229137 1.1230093812373672 1.19191373659933 1.1701368869267361 1.0246483877911785 1.069753697515231 1.2050817944526941 1.0877061006967201 1.2270093792729804 1.2517966354117989 1.1013616766536847 1.0 10.856367018780558 -11.052622014946918 1.3856950898540488 1.0007860760780614 1.1603022287993527 0.16657000325321192 0.07260079448854183 0.3562303561765454 1.2297670747225236 0.052006423446744776 0.011831617937806457 8.85886299116792e-12 11.052622014946918 0.15951615272129138 TLS(ph)PEFNER ddPTM_A549_PD325901_60min_R1 2 TLSPEFNER 9 0 Q9BSJ8;Q9BSJ8-2 Q9BSJ8 ESYT1 Extended synaptotagmin-1 1 T(0.003)LS(0.997)PEFNER;T(0.042)LS(0.958)PEFNER 175.33 1.4089999999999997e-35 46008000.0 8304.9 8820.5 7465.1 8515.5 9535.5 8273.9 9380.0 9632.1 8837.9 10148.0 10335.0 True False 9148.007334255753 9563.834490547437 7971.7265772930305 9041.483094896317 8865.759375689164 8206.520101602797 9736.961032932952 9439.980209263726 8466.473797625133 9507.25354813148 9063.86051896286 1.0092837720877155 1.0551612605399832 0.8795067577016512 0.9975311376405533 0.9781438446830419 0.9054111197357475 1.074262011486372 1.041496632644994 0.934091359847395 1.0489187833639961 1.0 13.145909944789084 -8.795765648783423 24.999624445781155 0.9688764988990572 0.9904136531463323 0.0 0.06215873124454636 645.6592494083616 470227.32781215344 0.010267098276243987 0.010930430334937936 1.600421404833228e-09 8.795765648783423 0.021537154247275092 TLS(ph)PGILGR ddPTM_A549_PD325901_60min_R1 1 TLSPGILGR 9 0 A0A096LNZ3;C9JA38;C9JJG6;Q5D0E6-4;Q5D0E6-2;Q5D0E6 A0A096LNZ3 DALRD3 DALR anticodon-binding domain-containing protein 3 1 T(0.009)LS(0.991)PGILGR 77.192 0.0019325 1816500.0 240.59 348.96 472.17 475.57 518.08 622.95 368.53 667.08 514.39 679.32 541.51 True False 265.01451968700303 378.3680838752263 504.2142955888669 504.9448788021655 481.69184807897255 617.8769017384143 382.5546108173537 653.7745660858634 492.77197713941024 636.4276192665235 474.9077029147148 0.5580337359459403 0.7967191973366974 1.0617100807047029 1.063248449547353 1.0142851866217806 1.3010462831961567 0.8055346511952742 1.3766350010188613 1.0376163075794615 1.3401080154322427 1.0 8.891503346406296 -5.502914266194082 2.3235649259891864 1.0525355900966926 0.540158489739023 0.4886873547064564 0.16984571391017625 0.2056257816626454 1.8079529324045551 0.01855691522874349 0.17151092353862663 3.1411287209588306e-06 5.502914266194082 -0.5123771003576696 TLS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 TLSPGR 6 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 T(0.001)LS(0.999)PGR 105.04 0.028883999999999996 210320000.0 3911.2 3674.4 3632.2 4157.1 3937.7 3533.2 3508.4 3999.5 3561.5 4282.3 3939.4 True False 4308.262144726739 3984.054583307924 3878.7029341929433 4413.874625540897 3661.1295363275344 3504.426790628725 3641.9140818701444 3919.7268349529486 3411.8225404498703 4011.9148471781127 3454.8787739141076 1.2470081952675331 1.1531676924207392 1.1226741046542354 1.2775772796624993 1.0596984079356744 1.0143414631762848 1.0541365761856067 1.1345482986403614 0.9875375559370329 1.1612317275702635 1.0 11.754419374337488 -6.996227746744532 0.46415225213329314 0.9917783518778509 1.234580333565996 0.24943439826146707 0.08008826747483777 0.6906241922012005 0.24340164533099473 0.016195252801002643 0.07139300933043219 1.008723766295363e-07 6.996227746744532 0.24280198168814504 TLS(ph)PGRR ddPTM_A549_MK2206_60min_R1 5 TLSPGRR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 TLS(1)PGRR;TLS(1)PGRR;T(0.075)LS(0.925)PGRR;T(0.003)LS(0.997)PGRR;T(0.023)LS(0.977)PGRR 76.221 0.0074355 601584400.0 11089.52 10359.130000000001 9834.830000000002 9152.990000000002 12777.02 9755.220000000001 9087.7 9246.91 14215.800000000001 14360.730000000001 15204.500000000002 True False 12961.159863266603 10886.365469578306 11229.556779230383 11395.47296089334 10897.537283616048 10787.510905409046 10738.817456905857 10557.687809974206 10995.943997967826 11116.631119039861 11428.803027147665 1.1340785060761849 0.9525376755307736 0.9825663065988627 0.9970836783016424 0.9535151894498782 0.9438880764490112 0.9396274860453159 0.9237789631071394 0.9621256024667117 0.9726855115652724 1.0 13.48038669323089 -5.2574718421463755 24.74264965818583 0.9709017596384482 1.134078579756229 0.8046415220669119 0.023962804647688605 133.36147360663261 831639.1465623904 0.003924847750507193 0.041335806446644134 5.527492447520023e-06 5.2574718421463755 0.16317682011778079 TLS(ph)PGRR ddPTM_A549_PD325901_60min_R1 5 TLSPGRR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 T(0.001)LS(0.999)PGRR;T(0.002)LS(0.998)PGRR;T(0.106)LS(0.894)PGRR;T(0.004)LS(0.996)PGRR;T(0.019)LS(0.981)PGRR 64.711 0.010695 786082000.0 6319.9 5961.39 6863.240000000001 6324.7300000000005 6780.680000000001 6123.23 5748.51 5769.13 6449.03 7370.6900000000005 6837.5 True False 6961.491595535519 6463.777256800028 7329.020738414837 6715.394207595983 6304.428428876092 6073.364445030437 5967.272693755372 5654.060176355068 6177.99969620593 6905.30337551018 5996.5308464836535 1.1609198341100364 1.0779194541441184 1.2222101288301637 1.119879873799677 1.0513459515634758 1.0128130081398379 0.9951208201079398 0.9428885335711381 1.0302623057177618 1.1515497130410706 1.0 12.549912389043556 -6.841036005563658 2.4629277010293795 1.0072733260607467 1.1492631487751321 0.49636535727274256 0.05761221068280355 0.1060883543172607 1.309860099204486 0.0055052796685720155 0.011684651275897474 1.441995796647004e-07 6.841036005563658 0.14198982271438543 TLS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 TLSPSR 6 0 H3BN21;Q9P2P6;M0QZ53;C9JFW7;Q2NL68-3;Q2NL68-4;Q2NL68-2;Q2NL68 H3BN21;Q2NL68 STARD9;PROSER3 StAR-related lipid transfer protein 9;Proline and serine-rich protein 3 1 T(0.01)LS(0.977)PS(0.013)R;T(0.009)LS(0.89)PS(0.101)R 74.184 0.04653 47014000.0 3660.0 3780.7 3367.5 2925.3999999999996 4579.7 3123.1000000000004 3561.8 3557.1 4822.0 5753.799999999999 5368.1 True False 4277.718521591175 3973.1214813246593 3845.0621367180042 3642.123131326197 3906.0321966919064 3453.5843690540046 4208.932955314026 4061.329818161875 3729.8246991517076 4454.012583812351 4035.0526179770036 1.0601394644850588 0.9846517152275962 0.9529149928770316 0.9026209757711154 0.9680250957050016 0.8558957456137161 1.0430924584632055 1.0065122323480495 0.924355901217882 1.1038301121449552 1.0 11.97837177134966 -6.265176198078929 0.0012150855042515876 1.9246151090907229 2.1779642833254495e-05 0.0 0.07021162202684986 2709664.0683995034 671.0381754450228 527922.4705885639 534959.2941731642 5.430299735230461e-07 6.265176198078929 -1.9245933294478896 TLS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 TLSPSR 6 0 H3BN21;Q9P2P6;M0QZ53;C9JFW7;Q2NL68-3;Q2NL68-4;Q2NL68-2;Q2NL68 H3BN21;Q2NL68 STARD9;PROSER3 StAR-related lipid transfer protein 9;Proline and serine-rich protein 3 1 T(0.047)LS(0.951)PS(0.001)R;T(0.001)LS(0.999)PSR 101.41 0.03228 66505000.0 12525.900000000001 12537.3 12225.6 12973.9 14045.3 13706.5 11748.099999999999 14371.1 13614.4 13109.7 13640.4 True False 13797.520146919784 13593.862270658177 13055.302734505056 13775.268337135258 13058.806581654548 13594.878808375599 12195.180374306985 14084.457136590152 13042.234113351316 12281.951304684606 11962.717273619834 1.1533767647711657 1.1363523821327235 1.0913325489430892 1.1515166681663922 1.091625446206257 1.1364373576189923 1.0194322991482694 1.1773627023393067 1.090240103066887 1.0266857457016683 1.0 13.546257507539933 -13.397917575710606 0.17960852281661865 0.7329839714531451 1.1448558366406698 0.48496366803189606 0.04116058102916058 14.915965646359691 0.27635226869713736 1.4983509040278955 0.0482233794816777 4.00020662054666e-14 13.397917575710606 0.4118718651875247 TLS(ph)PT(ph)PSAEGYQDVR ddPTM_A549_MK2206_60min_R1 1 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 2 T(0.082)LS(0.656)PT(0.786)PS(0.474)AEGY(0.002)QDVR 55.841 0.020324000000000002 1673100.0 328.6 197.15 337.28 298.05 588.99 168.8 312.25 219.11 536.29 413.96 561.99 True False 384.0596465013279 207.18409290426547 385.1113756413508 371.072263379973 502.350351230335 186.66230395962847 368.9817831705328 250.16951349623253 414.82117127915166 320.44614849229396 422.4323728650542 0.9091624391770172 0.49045505556092955 0.9116521374283367 0.8784181497816026 1.1891852601713613 0.44187499810592795 0.873469475523373 0.5922119836590958 0.9819824377230342 0.7585738430010436 1.0 8.722576588823017 -8.946111236529884 23.83468023996917 0.9920511690279799 0.7880788170640894 0.0326717706404378 0.21482474826685424 71.85293001488672 31779.969904948008 0.03318436839133292 0.03532478455211269 1.1321103568878937e-09 8.946111236529884 -0.2039723519638904 TLS(ph)PTPASATAPTSQGIPT(ph)S(ph)DEESTPKK ddPTM_A549_MK2206_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 3 T(0.438)LS(0.461)PT(0.086)PAS(0.009)AT(0.005)APT(0.004)S(0.004)QGIPT(0.567)S(0.535)DEES(0.468)T(0.423)PKK 51.166000000000004 0.0027132 6294600.0 564.74 880.75 569.35 612.02 1200.7 800.52 635.66 486.52 851.3 1111.5 917.66 True False 660.054305432623 925.5764130125881 650.0923912517875 761.9649274746216 1024.078620557672 885.2304950578305 751.1511938836859 555.4856999050112 658.4819092467538 860.4113780297241 689.7796958724277 0.9569059648788178 1.3418435169245255 0.9424637969802169 1.1046496903781642 1.4846459336011995 1.2833524969710774 1.0889726073099846 0.8053088590878823 0.9546264020049348 1.2473712740144993 1.0 9.429991852503212 -8.003847436034084 22.59795362308445 0.9641305457003473 1.191146411279017 0.17853409815401156 0.17796155011603276 41.94308828001289 246360.08464437452 0.024087224153416496 0.032829523991100194 9.911800768907865e-09 8.003847436034084 0.22701586557866982 TLS(ph)PTPASATAPTSQGIPTS(ph)DEEST(ph)PKK ddPTM_A549_MK2206_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 3 T(0.396)LS(0.427)PT(0.145)PAS(0.013)AT(0.014)APT(0.017)S(0.017)QGIPT(0.352)S(0.596)DEES(0.282)T(0.74)PKK 52.056000000000004 0.0024647 5858000.0 585.37 616.09 563.51 450.01 753.74 672.47 833.13 628.32 900.12 593.32 871.21 True False 684.1661450775485 647.4463494668473 643.4241914363662 560.2624702017163 642.8658444733405 743.6303290505414 984.4989367906038 717.3862841492985 696.2442571962738 459.28859992136415 654.8645128272098 1.0447445718563013 0.9886722165958628 0.9825302468422775 0.8555395188279887 0.9816776323669334 1.1355483683794498 1.503362783456202 1.0954728346053857 1.0631882527737189 0.7013490438480218 1.0 9.355052643155682 -7.151290161753301 6.5384618115679665 1.0819387888923575 0.9645468118189865 0.08938874049706924 0.17885414900938276 0.4332815100850676 22.668138402169017 0.02263096641214646 0.039412900136006956 7.058458054862174e-08 7.151290161753301 -0.11739197707337101 TLS(ph)PTPASATAPTSQGIPTS(ph)DEEST(ph)PKK ddPTM_A549_PD325901_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 3 T(0.116)LS(0.676)PT(0.207)PASATAPTSQGIPT(0.21)S(0.79)DEES(0.235)T(0.765)PKK 115.93 8.2592e-21 9133800.0 673.11 1046.1 809.53 1348.9 1024.4 884.98 1250.0 821.02 1068.4 1263.0 1590.8 True False 741.4436316826076 1134.2585182882692 864.4695738993487 1432.2184894258294 952.4496779881476 877.7730162941837 1297.5694340262453 804.6441120222702 1023.4988634610812 1183.2539644550723 1395.1416849120583 0.5314468341825397 0.813005969612159 0.6196285174819645 1.0265756553006358 0.6826902875088164 0.6291640668377803 0.9300628373870404 0.5767472370184326 0.7336164308828581 0.8481245863782343 1.0 10.446195928394124 -10.554383484091389 0.7800797002212356 1.006827334668367 0.7326914651700813 0.18016985654794437 0.148876152624782 0.6110972902658697 0.6440918355667778 0.10004028065060451 0.02562852984023928 2.7900791001039213e-11 10.554383484091389 -0.2741358694982856 TLS(ph)PTPASATAPTSQGIPTS(ph)DEESTPKK ddPTM_A549_MK2206_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 2 T(0.131)LS(0.675)PT(0.193)PAS(0.001)AT(0.001)APT(0.004)S(0.003)QGIPT(0.216)S(0.754)DEES(0.012)T(0.011)PKK 79.163 1.3072e-06 10344000.0 817.54 739.51 436.43 711.36 1051.3 676.92 563.38 527.52 893.58 1115.7 637.03 True False 955.5207650660242 777.1479002974047 498.32233654872704 885.6432319341635 896.6551626486882 748.55122509687 665.73885349116 602.2975754622454 691.1855567540399 863.6625951126971 478.83786986641303 1.9954995734414176 1.622987547986158 1.0406911564612669 1.8495680639905145 1.8725652649378768 1.5632665505460168 1.3903220596919137 1.257831958091108 1.44346468867817 1.8036639319142471 1.0 8.903393445038532 -12.579225125101186 0.13406120504668945 4.3928788803493595e-09 1.8529389422300484 0.0 0.34117385647166487 23.94419571142442 0.4188499674133635 7.985132592689803 0.8577930071885932 2.634965145649758e-13 12.579225125101186 1.8529389378371695 TLS(ph)PTPASATAPTSQGIPTSDEESTPKK ddPTM_A549_MK2206_60min_R1 2 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 T(0.278)LS(0.361)PT(0.361)PASATAPTSQGIPTSDEESTPKK;T(0.134)LS(0.732)PT(0.134)PASATAPTSQGIPTSDEESTPKK 164.64 1.8224e-46 18744600.0 2389.26 2917.2400000000002 2667.68 2359.59 3456.56 2543.59 2281.05 2209.23 3265.69 3941.27 4574.41 True False 2792.5086762013466 3065.7150554605087 3045.9971376035305 2937.6896559260194 2948.104602877344 2812.751005501606 2695.48725861055 2522.3951179831215 2526.016429235325 3050.9343696691076 3438.4577497066357 0.812139883481075 0.891595964999736 0.8858614411834522 0.854362586300983 0.8573915451277166 0.8180269208605474 0.7839233327326837 0.73358328110861 0.7346364600381788 0.8872973268115361 1.0 11.747545903146436 -10.954211817261838 1.2460479667396807 0.9989551190135763 0.8136566327166418 0.34506633875165305 0.05972372448242531 0.2730715834596286 0.7606114200439137 0.042352785896944196 0.010097625327526604 1.1111896376084803e-11 10.954211817261838 -0.18529848629693446 TLS(ph)PTPS(ph)AEGYQDVR ddPTM_A549_MK2206_60min_R1 1 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 2 T(0.376)LS(0.618)PT(0.018)PS(0.986)AEGY(0.002)QDVR 57.328 0.012167 1701000.0 397.47 410.06 448.58 178.73 614.89 296.94 589.15 583.39 419.37 437.24 599.9 True False 464.55321879148767 430.9303024921284 512.1953892469078 222.51885802349466 524.4404955398574 328.3619937071804 696.1909289188774 666.0873190569442 324.3833645962777 338.46718032363185 450.9282736022812 1.0302153268863856 0.9556515475279534 1.1358688714619483 0.49346840961176086 1.1630242019430654 0.728191184562527 1.5439061369057507 1.4771469389928593 0.7193679872963209 0.7506009273265485 1.0 8.816754160843487 TLS(ph)PTPS(ph)AEGYQDVR ddPTM_A549_PD325901_60min_R1 2 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 2 T(0.084)LS(0.772)PT(0.146)PS(0.996)AEGY(0.002)QDVR;T(0.441)LS(0.506)PT(0.062)PS(0.991)AEGYQDVR 68.513 0.0029808000000000005 3684200.0 795.57 865.1500000000001 824.38 648.8299999999999 800.15 678.73 816.94 638.6999999999999 795.08 975.64 709.63 True False 876.3356807323205 938.0592267441893 880.3273841996531 688.9067555001562 743.9502243676453 673.2026479122144 848.0290987467207 625.9606274495428 761.6655525651786 914.0379238962356 622.350008715202 1.4081074451038478 1.507285632855934 1.4145213655849822 1.1069442369292417 1.1953887907923042 1.0817106748371292 1.3626240650296084 1.0058015886298366 1.223854008032528 1.4686878944264867 1.0 9.281582367908511 -2.000000000000001 0.19972393902090874 1.0482633587717298 3.152888768085367 0.15401383931895762 0.16483752607969218 27.218813911377413 0.30228092877297846 0.09407389518423004 18.14912408411642 0.00999999999999998 2.000000000000001 2.1046254093136376 TLS(ph)PTPSAEGYQDVR ddPTM_A549_MK2206_60min_R1 2 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.028)LS(0.972)PTPSAEGYQDVR;T(0.04)LS(0.959)PT(0.001)PSAEGYQDVR 340.47 1.2615e-186 336550000.0 11188.9 10924.900000000001 10419.5 11061.3 14563.7 10876.2 11682.5 10366.0 17520.6 15241.5 18081.6 True False 13077.312777658877 11480.930745979258 11897.141776847284 13771.318996560618 12421.399022416736 12027.112264962747 13805.059029270624 11835.41224454359 13552.212074648987 11798.434564318524 13591.439693227212 0.9621727405504709 0.8447177786250527 0.8753408060792692 1.0132347497684915 0.9139134118813386 0.8849034786915186 1.0157171970641095 0.8707990111188387 0.997113799607427 0.8680783515669672 1.0 13.730410663341932 -8.807628708746684 16.713502784914773 0.9986397303163627 0.9230084056828187 0.0 0.06604554722009616 4.061171533235966 1468.9939945374103 0.008757199532799482 0.009322652630754635 1.5572964416370188e-09 8.807628708746684 -0.07563132463354394 TLS(ph)PTPSAEGYQDVR ddPTM_A549_PD325901_60min_R1 2 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.035)LS(0.902)PT(0.055)PS(0.007)AEGY(0.001)QDVR;T(0.001)LS(0.843)PT(0.155)PS(0.001)AEGYQDVR 333.13 6.621799999999998e-186 375900000.0 22469.9 25084.8 22649.5 29375.0 33114.0 25164.2 23851.3 24365.9 31160.0 32258.0 36829.0 True False 24751.02770653391 27198.784131113265 24186.631272507875 31189.42703453459 30788.186877098316 24959.271098363934 24758.974273432163 23879.903009821242 29850.45356181887 30221.224374815265 32299.2664782664 0.766303089984673 0.8420867436545298 0.7488291193480393 0.9656388653755156 0.9532162873672422 0.7727504002345869 0.7665491193148932 0.7393326726441173 0.9241836368607538 0.9356628700887244 1.0 14.979213780995465 -8.979848369733771 4.101052824675685 0.9686107569039636 0.8236298758781196 0.3891664382997664 0.07506461150451112 0.15267936018428002 5.366051181380931 0.014492065132917748 0.014856046859343544 1.047494208007632e-09 8.979848369733771 -0.14498088102584394 TLS(ph)PTPSAEGYQDVRDR ddPTM_A549_MK2206_60min_R1 1 TLSPTPSAEGYQDVRDR 17 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.001)LS(0.959)PT(0.039)PS(0.001)AEGYQDVRDR 139.11 1.8696e-13 23262000.0 2207.5 2459.1 2767.0 2787.7 3830.1 2888.5 2517.9 2869.5 4275.7 4055.1 4258.0 True False 2580.0720318067006 2584.2576863346662 3159.4022070671767 3470.686625144608 3266.6973637027913 3194.1591527688793 2975.3698377744904 3276.2604124751906 3307.2607768898697 3139.0500936107387 3200.621085178386 0.806116051585938 0.8074238148033176 0.9871216001475189 1.0843791041735171 1.020644830102006 0.9979810379805873 0.9296226446651241 1.023632702929778 1.0333184369137969 0.9807627988665159 1.0 11.64413617401304 -5.787257001889148 4.7741503772526706 1.0138160220730752 0.8034886829948132 0.8207705352400813 0.03600086116407145 0.04817999992783166 2.6603825548253113 0.004907819507774623 0.017474214684894355 1.63208584471837e-06 5.787257001889148 -0.21032733907826195 TLS(ph)PTPSAEGYQDVRDR ddPTM_A549_PD325901_60min_R1 2 TLSPTPSAEGYQDVRDR 17 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.229)LS(0.766)PT(0.004)PSAEGYQDVRDR;T(0.049)LS(0.82)PT(0.123)PS(0.008)AEGYQDVRDR 214.52 1.0647e-55 93879000.0 19123.8 19394.1 21011.5 22191.3 24426.0 27621.2 25266.3 27813.4 24602.5 26671.2 28623.5 True False 21065.23409780251 21028.50887059987 22437.466742413686 23562.006200901018 22710.402025125433 27396.26210497966 26227.822872749857 27258.6399178098 23568.54248249838 24987.175880264524 25102.990959316267 0.8391523596507827 0.8376893775200016 0.8938164690724495 0.9386134998449913 0.9046890891181677 1.0913544983297025 1.044808680975768 1.0858721959461777 0.9388738784432211 0.9953864031883913 1.0 14.615571647514324 -6.356461087923032 1.2686486242300155 0.9915759319510253 0.8370705919427831 0.6224580819837187 0.05273957681526065 0.31343961109598795 0.9246221041669527 0.009057641924278409 0.03684964135799721 4.4008737718048804e-07 6.356461087923032 -0.15450534000824223 TLS(ph)SPSLQTDGIAATPVPPPPPPK ddPTM_A549_MK2206_60min_R1 2 TLSSPSLQTDGIAATPVPPPPPPK 24 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.064)LS(0.47)S(0.41)PS(0.056)LQTDGIAATPVPPPPPPK;T(0.173)LS(0.642)S(0.149)PS(0.036)LQTDGIAATPVPPPPPPK 111.97 5.3884e-12 9884700.0 1926.1799999999998 2073.12 2170.3 1476.3600000000001 2970.9 1890.8400000000001 1783.3400000000001 2328.42 2800.8 2767.8999999999996 2981.5 True False 2251.272093420352 2178.632952988541 2478.08117455652 1838.0682662763188 2533.884545527433 2090.927433761991 2107.3497940731413 2658.4806654871877 2166.423271958543 2142.6294676099633 2241.1112647861332 1.0045338349745827 0.9721217269399811 1.1057376817893068 0.8201593089809058 1.1306375481403146 0.9329868920905744 0.9403146676317489 1.1862332349397582 0.9666736792585273 0.9560567122553962 1.0 11.129998560984916 TLS(ph)SPSLQTDGIAATPVPPPPPPK ddPTM_A549_PD325901_60min_R1 2 TLSSPSLQTDGIAATPVPPPPPPK 24 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.068)LS(0.404)S(0.364)PS(0.163)LQT(0.001)DGIAATPVPPPPPPK;T(0.321)LS(0.532)S(0.119)PS(0.029)LQTDGIAATPVPPPPPPK 151.05 9.808799999999999e-29 18479200.0 3989.4 4509.9 3771.2 4575.3 4392.7 4335.1 4102.6 4336.0 5248.1 5051.3 5373.7 True False 4394.400951158941 4889.965100495425 4027.136310067843 4857.905889739787 4084.171905992321 4299.796382897823 4258.726688028861 4249.515078473802 5027.540607759364 4732.360055939751 4712.768966690926 0.9324456560925949 1.037599155625258 0.8545159625967194 1.030796528341335 0.8666183160809653 0.9123715618754228 0.9036570046460666 0.9017023979975834 1.0667912310773544 1.0041570230552974 1.0 12.20235924274375 -8.759321908511643 24.99999729103951 1.0315403052701118 0.9308226059520319 0.34333883380402974 0.05741176621581578 40.585967042424045 479178.4313363855 0.009541808489963685 0.010562369896180552 1.7405162866343672e-09 8.759321908511643 -0.10071769931807983 TLS(ph)SPSNRPSGETSVPPPPAAPPFLPVGR ddPTM_A549_PD325901_60min_R1 2 TLSSPSNRPSGETSVPPPPAAPPFLPVGR 29 1 H3BUF6 H3BUF6 ATXN2L 1 T(0.045)LS(0.446)S(0.446)PS(0.031)NRPS(0.011)GET(0.011)S(0.011)VPPPPAAPPFLPVGR;T(0.077)LS(0.332)S(0.298)PS(0.063)NRPS(0.077)GET(0.077)S(0.077)VPPPPAAPPFLPVGR 81.844 1.277e-06 23670000.0 2608.3 2591.8 2744.3 3050.2 3396.6 3538.4 3184.3 4042.9 2982.1 3462.7 3007.1000000000004 True False 2873.092695871025 2810.2200819228924 2930.5447008165006 3238.603926493188 3158.0345336338737 3509.58444355278 3305.480279015822 3962.261187906306 2856.7727075320954 3244.0645310519208 2637.245763577477 1.0894292581870022 1.0655890022592251 1.1112141087833838 1.228025074955455 1.1974744929914822 1.3307764077292357 1.2533834823690724 1.5024239464627744 1.0832409883775207 1.2300956459405898 1.0 11.36481630613882 -8.980397386508777 24.224300912496606 1.036723664901822 1.2220960790312199 0.09175408339248414 0.12973627677558827 80.1623258396731 99063.91035628591 0.021912515193026175 0.02232826854328177 1.0461708466352673e-09 8.980397386508777 0.18537241412939776 TLS(ph)SSAQEDIIR ddPTM_A549_MK2206_60min_R1 2 TLSSSAQEDIIR 12 0 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 T(0.022)LS(0.433)S(0.433)S(0.112)AQEDIIR;T(0.046)LS(0.89)S(0.063)S(0.001)AQEDIIR 192.4 6.2897e-20 225710000.0 6665.9 7225.0 6147.9 5243.1 7946.700000000001 5428.0 5119.9 5133.8 6791.4 7749.799999999999 7381.5 True False 7790.940954391975 7592.721639529889 7019.764665279471 6527.659735371707 6777.750956929839 6002.387357185211 6050.119556940947 5861.531871603112 5253.158743637267 5999.114797530145 5548.469830963892 1.4041602805360331 1.3684352390559662 1.2651712776926072 1.1764792698237865 1.2215531783386113 1.0818094970415408 1.090412265229873 1.0564231310932144 0.9467761209264208 1.0812196840381785 1.0 12.437874241412041 -6.462595659036862 0.45400191521274197 0.9698056875175679 1.4905612862911988 0.881001523571433 0.048420012664986745 0.34189938021154065 0.09000709703251361 0.010111888525447456 0.07965886378365893 3.44670679988643e-07 6.462595659036862 0.5207555987736309 TLS(ph)SSAQEDIIR ddPTM_A549_PD325901_60min_R1 2 TLSSSAQEDIIR 12 0 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 T(0.023)LS(0.457)S(0.457)S(0.064)AQEDIIR;T(0.017)LS(0.965)S(0.017)S(0.002)AQEDIIR 239.35 1.4628e-50 290410000.0 37932.0 38965.0 37015.0 41413.0 45837.0 41910.0 42198.0 38866.0 40811.0 45066.0 50799.0 True False 41782.82871593747 42248.71729767942 39527.06048927697 43970.986954253 42617.56724906551 41568.69885521621 43803.86798163159 38090.78714021282 39095.855594075416 42220.52506898831 44551.04504139281 0.9378641663089302 0.9483215771577461 0.887230825955979 0.9869799218716222 0.9566008431332893 0.9330577726424671 0.9832287422423647 0.8549920008570461 0.8775519307740385 0.9476887698091214 1.0 15.44317165323496 -8.330525358457658 0.004357054770404325 1.8719802979234383 1.686731018102731e-06 0.010578382628864569 0.044463453491247855 15771.68760811442 50.83427270136538 10888.017928789437 10950.12120186298 4.671696723352384e-09 8.330525358457658 -1.8719786111924201 TLS(ph)TSDDVEDR ddPTM_A549_MK2206_60min_R1 2 TLSTSDDVEDR 11 0 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 T(0.01)LS(0.549)T(0.22)S(0.22)DDVEDR;T(0.002)LS(0.779)T(0.11)S(0.11)DDVEDR 97.911 0.0002777 3052400.0 1692.66 1704.0300000000002 1544.71 1399.79 1846.13 1516.25 1337.35 1066.63 1635.42 1770.6100000000001 1484.4499999999998 True False 1978.339626436208 1790.7578484993933 1763.7731056301911 1742.7386128389605 1574.5667225536222 1676.6985685947081 1580.3291840612073 1217.8280689173775 1264.9999812290932 1370.6279712579483 1115.8200962642204 1.772991571902777 1.6048804412959337 1.580696665650068 1.5618455149478587 1.4111295609617458 1.5026603071662858 1.4162938894470256 1.091419730648947 1.1336952842705816 1.228359281076607 1.0 10.123888724777531 -7.716247623609256 0.4404522486516804 1.0080814571680032 1.721366455948706 0.8294407215634243 0.09690511461909175 0.20708249462896222 0.08388656938225834 0.024632781781559792 0.05593792791290498 1.9219955437152835e-08 7.716247623609256 0.7132849987807028 up TLS(ph)TSDDVEDRENEK ddPTM_A549_MK2206_60min_R1 3 TLSTSDDVEDRENEK 15 1 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 T(0.002)LS(0.904)T(0.092)S(0.002)DDVEDRENEK;TLS(0.973)T(0.024)S(0.003)DDVEDRENEK;T(0.002)LS(0.977)T(0.019)S(0.001)DDVEDRENEK 228.08 8.5819e-55 297988700.0 40324.3 37635.0 34756.3 26692.3 40563.0 29331.6 27867.4 27073.9 38374.3 36902.5 35225.8 True False 47130.05600551886 39550.460747918005 39685.2659665663 33231.91469826288 34596.2364334812 32435.4504432597 32930.54585853166 30911.708235341393 29682.582321164955 28566.199620100673 26478.261677378272 1.7799527997634554 1.4936955163377654 1.4987866820755626 1.2550640636146668 1.3065901702693168 1.2249841337194336 1.243682317962206 1.1674372212187494 1.1210170321159827 1.0788547967446909 1.0 14.692520790525924 -2.0000000000135483 0.21828967931441554 1.002796669467106 4.865106358201663 0.9363051579253359 0.05408785848008654 6.617098895788453 0.07657178343759612 0.03200768450290141 9.108768174095148 0.00999999999968804 2.0000000000135483 3.862309688734557 up TLS(ph)TSDDVEDRENEKGR ddPTM_A549_MK2206_60min_R1 3 TLSTSDDVEDRENEKGR 17 2 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 T(0.007)LS(0.961)T(0.032)SDDVEDRENEKGR;T(0.206)LS(0.712)T(0.041)S(0.041)DDVEDRENEKGR;T(0.004)LS(0.71)T(0.13)S(0.156)DDVEDRENEKGR 132.14 7.9963e-13 48032200.0 6264.1 6858.6 5425.400000000001 5716.299999999999 8463.0 5431.3 4747.0 4772.6 8675.1 8665.5 7102.7 True False 7321.326937458822 7207.673444550826 6194.803301128394 7116.793756614458 7218.103910868308 6006.036560994844 5609.468453836729 5449.130665474506 6710.203701288045 6707.9575315488755 5338.903565452447 1.3713165723453882 1.350028775794157 1.160313765772882 1.3330066125686508 1.351982447777479 1.1249569293327104 1.0506779875431882 1.0206460181703465 1.256850516032759 1.2564297986117319 1.0 12.38232777505803 -7.292999059845287 8.780427093831161 1.1099783653718145 1.307944519876854 0.5156051858544732 0.09389514820704799 0.2583989049860431 68.60809565856195 0.01624018026236925 0.026138357688311575 5.0933197365084366e-08 7.292999059845287 0.19796615450503952 TLS(ph)TSDDVEDRENEKGR ddPTM_A549_PD325901_60min_R1 2 TLSTSDDVEDRENEKGR 17 2 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 T(0.014)LS(0.922)T(0.05)S(0.014)DDVEDRENEKGR;T(0.02)LS(0.803)T(0.063)S(0.114)DDVEDRENEKGR 86.13600000000001 7.2153999999999996e-06 20149700.0 4128.2 4269.8 4063.4 4606.299999999999 5582.700000000001 4671.200000000001 4191.7 4706.0 5935.6 7385.0 7947.8 True False 4547.291824979781 4629.631030864402 4339.166759209188 4890.820689333675 5190.590411269454 4633.159295931425 4351.217437286253 4612.135138214421 5686.147373605015 6918.709839668013 6970.270985255253 0.6523837931981432 0.6641967063630402 0.6225248298650309 0.7016686581740654 0.7446755545443652 0.6647028940097596 0.6242536978104173 0.6616866328397881 0.8157713503009218 0.992602705734639 1.0 12.766999029921394 -9.456017154726279 0.7019311187034284 0.9793060802827914 0.6613196879748385 0.8936250764015002 0.04298433143427164 0.14074335411647435 0.15136925805932921 0.0182089117405068 0.011596882469830939 3.499313443913204e-10 9.456017154726279 -0.3179863923079529 TLS(ph)TSDDVEDRENEKGRLEEAYEK ddPTM_A549_MK2206_60min_R1 2 TLSTSDDVEDRENEKGRLEEAYEK 24 3 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 T(0.172)LS(0.657)T(0.135)S(0.036)DDVEDRENEKGRLEEAYEK;T(0.196)LS(0.652)T(0.144)S(0.008)DDVEDRENEKGRLEEAYEK 98.15100000000001 1.0159e-08 49755000.0 4733.0 4849.0 5048.5 4289.8 6238.799999999999 3436.3 3344.8 3402.2 5944.0 6185.799999999999 7039.7 True False 5531.814689259844 5095.793388246427 5764.453213725562 5340.801192576443 5321.080784488382 3799.926985168669 3952.506864207521 3884.4722688005236 4597.69349061753 4788.4234837753165 5291.548204163988 1.045405706576912 0.9630061357537064 1.089369876511649 1.009307859725004 1.0055810850029023 0.7181125142502637 0.7469471526494349 0.7340899334043262 0.8688749139617674 0.9049191841448678 1.0 12.3694741732936 -7.0321520188281825 24.73587555860136 0.8888385525060591 1.024283410244433 0.4606678733928028 0.09288470691681606 642.4205612138372 494239.70132895804 0.01720176573795419 0.029812420180601523 9.286412717389277e-08 7.0321520188281825 0.13544485773837378 TLS(ph)TSDDVEDRENEKGRLEEAYEK ddPTM_A549_PD325901_60min_R1 1 TLSTSDDVEDRENEKGRLEEAYEK 24 3 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 T(0.029)LS(0.434)T(0.434)S(0.103)DDVEDRENEKGRLEEAYEK 84.561 1.1242e-06 24313000.0 1094.0 1286.6 1378.8 1214.4 1773.5 1647.7 1596.0 2251.4 1929.8 3088.9 2709.3 True False 1205.0620746397667 1395.0262973230917 1472.3736593979495 1289.4107298974923 1648.9354782428532 1634.281677493194 1656.73665336471 2206.494060810868 1848.6972170602726 2893.8663268450296 2376.0732756677394 0.507165366901874 0.5871141734595927 0.619666773106639 0.542664547891577 0.6939750112628402 0.6878077769019634 0.6972582328712582 0.9286304776062873 0.7780472243814702 1.217919647714474 1.0 11.21436361272517 -6.84889960231588 0.09474680251480326 1.3077336874560415 4.584622855819777e-22 0.8067013068025088 0.09082154210892486 6.928174058764919 0.1862588464466204 0.8452824481359996 1.758575195358358 1.416121112800853e-07 6.84889960231588 -1.3077336874560415 down TLS(ph)YNR ddPTM_A549_MK2206_60min_R1 1 TLSYNR 6 0 Q9UBY0 Q9UBY0 SLC9A2 Sodium/hydrogen exchanger 2 1 T(0.001)LS(0.999)YNR 64.207 0.05892000000000001 4541900.0 1213.3 1461.3 1552.8 1502.5 2385.7 2212.4 1855.8 2156.9 3244.8 2874.8 3556.7 True False 1418.0753776629979 1535.673928283048 1773.0103892786099 1870.6125674497882 2034.7666903176807 2446.5146995277364 2192.9748381357076 2462.647180229218 2509.857980880849 2225.380683364689 2673.473230073735 0.530424378935669 0.5744115598422109 0.6631861390397052 0.6996937715356126 0.7610948437518341 0.9151072365367432 0.8202718521611023 0.9211415145388598 0.9388004909297807 0.8323931050932245 1.0 11.3844995155287 -5.9590143423601845 0.3346019726076031 0.9960863337549999 0.2940427401284296 0.8519375727714351 0.05691204326213739 0.5125571170647529 0.05515957538970393 0.010548548148419067 0.13562553403054742 1.0989695459082376e-06 5.9590143423601845 -0.7020435936265703 down TLSAS(ph)AAEVAPR ddPTM_A549_MK2206_60min_R1 2 TLSASAAEVAPR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 TLS(0.002)AS(0.998)AAEVAPR;TLS(0.002)AS(0.998)AAEVAPR 132.99 5.4254e-08 17255300.0 4717.6 5654.5 4779.6 4398.1 6534.4 5581.4 5258.3 5084.5 7634.4 7712.4 8257.7 True False 5513.815545753698 5942.2898976777515 5457.419150306568 5475.634697438214 5573.198416067334 6172.020043366527 6213.665045462332 5805.243445628201 5905.22058963164 5970.163483505575 6207.085189074103 0.8883099519013016 0.9573398328957282 0.879224142100205 0.8821587799498208 0.897876901363855 0.9943507871022458 1.0010600557568972 0.935260797748799 0.9513677369896881 0.9618304408024615 1.0 12.599700230969656 -7.254583608745198 24.649112953992177 0.9761032301895131 0.9018584170729447 0.6391097456478977 0.02728389713098427 243.95828346371107 877121.6670411801 0.004435020382949322 0.007570738749693611 5.564375006849337e-08 7.254583608745198 -0.07424481311656839 TLSAS(ph)AAEVAPR ddPTM_A549_PD325901_60min_R1 2 TLSASAAEVAPR 12 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 TLS(0.285)AS(0.715)AAEVAPR;T(0.005)LS(0.054)AS(0.941)AAEVAPR 81.23899999999999 0.0007509999999999999 29277000.0 8238.6 8545.5 7866.6 8869.0 9599.1 8978.8 8094.9 8682.3 9303.2 10258.3 10750.0 True False 9074.976607063236 9265.659275434859 8400.47478170866 9416.817987039567 8924.892331097255 8905.679629711649 8402.95584919925 8509.124715367416 8912.218856749474 9610.589187307563 9427.818149864612 0.9625744220780879 0.9827999573334917 0.8910306338300867 0.9988332228464544 0.9466551209651218 0.9446172473998704 0.8912937983768727 0.9025550323634118 0.9453108571973737 1.0193863558394554 1.0 13.20270821584046 -10.3223479448676 0.9559778955163604 0.9964945426301497 0.9407348258830743 0.3633473458415125 0.034072392299844684 0.4894359983593827 0.8697714817662586 0.01588377121135429 0.0062664556232411356 4.7604943618624844e-11 10.3223479448676 -0.05575971674707536 TLSDES(ph)LCS(ph)GRR ddPTM_A549_MK2206_60min_R1 1 TLSDESLCSGRR 12 1 O60292;M0R2Q7 O60292;M0R2Q7 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 2 T(0.001)LS(0.017)DES(0.992)LCS(0.989)GRR 60.973 0.013789 1806300.0 514.72 834.41 752.34 860.74 973.45 511.12 462.4 837.36 1235.5 1033.1 977.01 True False 601.5921523042105 876.8779049467317 859.0331248517963 1071.6213386400873 830.2567945214175 565.206379146003 546.412094597452 956.0583443074502 955.6612226880824 799.7219924808891 734.3914528957571 0.8191709611162962 1.1940197581128438 1.1697210274773329 1.4591963651191868 1.1305371151143666 0.7696254864042256 0.7440338425003596 1.30183751531645 1.3012967660773325 1.0889587417276292 1.0 9.52040545803535 -5.253606573865302 23.270391072852338 1.1297688515040902 0.8191705517303255 0.1424808990211045 0.20676668119383734 573.9413698337202 1705002.2279708842 0.030544567718249892 0.4342572173417539 5.576907306117496e-06 5.253606573865302 -0.31059829977376474 TLSDFNSLIS(ph)SPHLGR ddPTM_A549_MK2206_60min_R1 1 TLSDFNSLISSPHLGR 16 0 Q9NRJ4 Q9NRJ4 TULP4 Tubby-related protein 4 1 TLSDFNSLIS(0.5)S(0.5)PHLGR 47.68 0.0079533 1094800.0 335.59 326.81 448.38 453.64 613.2 434.0 337.1 245.85 532.51 548.39 593.02 True False 392.2293876122354 343.4432330816279 511.96702623953064 564.7818203646732 522.9990923011283 479.9255919341156 398.3467065069228 280.69999038404814 411.8973352437321 424.50831812660414 445.75676748062153 0.8799179647436017 0.7704722802588936 1.1485345004028178 1.2670179379592392 1.1732835717942627 1.0766535181206855 0.8936414106696433 0.6297156002152027 0.9240405649290306 0.9523317403028746 1.0 8.800112890791832 -7.75687618659341 24.947230616153085 0.9280117436046698 1.0594067222473396 0.2012179731989201 0.15839029965169882 196.25874976696193 1072951.1773260427 0.026905175284865874 0.03916374163388999 1.7503456251172984e-08 7.75687618659341 0.1313949786426698 TLSDFNSLIS(ph)SPHLGR ddPTM_A549_PD325901_60min_R1 1 TLSDFNSLISSPHLGR 16 0 Q9NRJ4 Q9NRJ4 TULP4 Tubby-related protein 4 1 TLSDFNSLIS(0.583)S(0.417)PHLGR 80.975 8.1274e-05 1479700.0 816.13 675.11 950.9 552.3 840.27 676.67 721.33 866.13 915.57 655.77 795.74 True False 898.9829167968484 732.0038889987513 1015.4337922262189 586.4143166356922 781.2523339741316 671.1594238692231 748.7806078769216 848.8543576841599 877.0917768804403 614.3645702855915 697.869024611467 1.2881828610996884 1.0489129953952157 1.4550492376295874 0.8402927998734055 1.1194827487995869 0.9617269146497593 1.0729529202041876 1.216351962543047 1.2568143103482121 0.8803436585076033 1.0 9.446812487994622 -6.249312555907267 24.987574825953885 1.1004570343313351 1.2425347822001582 0.2264014287832996 0.15643943317881007 1154.3079002556435 2378471.9270395576 0.020894595976938796 0.0548201374175503 5.63232159305835e-07 6.249312555907267 0.1420777478688231 TLSDPPS(ph)PLPHGPPNK ddPTM_A549_MK2206_60min_R1 2 TLSDPPSPLPHGPPNK 16 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 T(0.013)LS(0.011)DPPS(0.975)PLPHGPPNK;T(0.05)LS(0.043)DPPS(0.907)PLPHGPPNK 74.732 0.00016397 15030900.0 3854.0 5297.0 4607.7 4466.9 5032.9 4566.3 3807.1000000000004 3469.6 5452.4 6340.4 6538.1 True False 4504.460978746556 5566.594674683714 5261.141145465642 5561.290700526759 4292.567077042315 5049.502835135374 4498.8007900993925 3961.4264252043663 4217.440105693644 4908.099236400959 4914.509327619724 0.9165637255852418 1.132685748178205 1.070532334916496 1.131606500220093 0.8734477423652305 1.0274683592026128 0.9154119954185387 0.8060675361711094 0.8581609728547008 0.99869568032301 1.0 12.262831667464564 -6.7644318987375165 24.99998644257198 0.9242890808561596 1.0683845042853957 0.39212226887823143 0.08208267549062946 61.73768806839158 515772.3072244764 0.012372460033746797 0.024119225692304593 1.7201570561157506e-07 6.7644318987375165 0.1440954234292361 TLSDPPS(ph)PLPHGPPNK ddPTM_A549_PD325901_60min_R1 2 TLSDPPSPLPHGPPNK 16 0 Q9ULH1;Q9ULH1-2;H0YBF7;A0A0A0MRE5 Q9ULH1 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 TLS(0.001)DPPS(0.999)PLPHGPPNK;T(0.07)LS(0.063)DPPS(0.867)PLPHGPPNK 107.57 2.1794e-07 18481000.0 3571.5 3820.3 3266.2 4332.6 4715.9 4052.6 3470.9 3959.7000000000003 4634.4 4762.1 4824.6 True False 3934.0760508006624 4142.250088344017 3487.86397325615 4600.2148619514755 4384.671452971793 4019.5969692352496 3602.9869988493597 3880.7206771754413 4439.632284560121 4461.420193294929 4231.204785659236 0.9297768011925047 0.97897650862546 0.824319348729591 1.087211585112335 1.0362702055529667 0.9499887556515378 0.8515274446325344 0.917166829251166 1.0492596103141367 1.0544089495303934 1.0 12.046852796899802 -8.763907002412324 24.993030580245893 1.023261483894018 0.9484668753616569 0.22541253629842617 0.07148980831387147 82.10549837744743 831593.2769581417 0.012550552009586961 0.013667744501571395 1.722237326550516e-09 8.763907002412324 -0.07479460853236108 TLSDVEDQKELAS(ph)PVSPELR ddPTM_A549_PD325901_60min_R1 2 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TLSDVEDQKELAS(1)PVSPELR;TLSDVEDQKELAS(1)PVSPELR 284.36 1.7379999999999995e-127 65981000.0 14946.6 13539.1 15535.0 14669.599999999999 16854.7 16193.4 16533.9 18023.1 16934.4 17718.7 19934.4 True False 16463.967828894638 14680.087472475581 16589.298519543918 15575.707874921156 15670.884017558406 16061.526319304661 17163.10661219724 17663.615131651564 16222.70605896231 16599.938258107733 17482.595174573133 0.9417347747570111 0.839697271823033 0.9489036584037344 0.8909265311808299 0.8963705823463957 0.9187152227070219 0.9817253354444447 1.0103542955305462 0.9279346628443803 0.9495122487450178 1.0 14.093631738734864 -7.647226821563116 4.522808389339164 0.9701561870566258 0.9023241657733742 0.4983525424263022 0.03398667430967204 0.15707574136551883 5.544092178586137 0.005663513597385793 0.008467734326372926 2.253062184619715e-08 7.647226821563116 -0.06783202128325161 TLSDVEDQKELASPVS(ph)PELR ddPTM_A549_MK2206_60min_R1 2 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TLSDVEDQKELAS(0.029)PVS(0.971)PELR;TLSDVEDQKELAS(0.005)PVS(0.995)PELR 159.1 2.1346e-27 55085000.0 8542.8 9177.2 7770.3 8024.1 12330.3 9775.7 7766.0 8022.2 12040.8 12697.1 14575.099999999999 True False 9984.61578859265 9644.280281009516 8872.245381125435 9990.004860215533 10516.52920384964 10810.15808541552 9176.981675267758 9159.371416957129 9313.578025206527 9828.816291481076 10955.70041770396 0.9113626156167909 0.8802979191932592 0.8098291339537044 0.9118545122018942 0.9599139080925728 0.9867153785938461 0.8376444522376802 0.8360370462627804 0.8501125140439373 0.8971417542230449 1.0 13.419394100924245 -10.860178723483761 1.122258316863013 0.9996322146821356 0.8850195881089749 0.048163239302391636 0.0590824869108597 0.43128280198984636 0.9693432540279475 0.038108255258292374 0.009388654863674724 1.3798163174178612e-11 10.860178723483761 -0.11461262657316074 TLSDVEDQKELASPVS(ph)PELR ddPTM_A549_PD325901_60min_R1 3 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TLSDVEDQKELASPVS(1)PELR;TLSDVEDQKELAS(0.004)PVS(0.996)PELR;TLSDVEDQKELAS(0.001)PVS(0.999)PELR 189.39 1.5316e-44 48514000.0 12206.400000000001 13846.7 12708.099999999999 13711.7 16274.4 15104.900000000001 15025.0 14150.900000000001 16832.8 16926.1 16026.099999999999 True False 13445.58474212325 15013.610003997874 13570.548086013261 14558.640567469893 15131.342287632091 14981.890702413644 15596.78459699547 13868.6491983337 16125.375953638795 15857.383157373692 14054.99129781817 0.9566412712194621 1.068204859460035 0.9655323008360659 1.0358341929197714 1.0765814056377971 1.0659480596575939 1.1096972076686125 0.9867419270822746 1.1473060076630586 1.1282385610466594 1.0 13.77879494001986 -6.534995015391525 5.061586943051416 1.067689778040304 1.0031555967167807 0.2831416634211261 0.052930814304824506 0.2346259621375466 17.21054565472336 0.008569720483669867 0.018857303963109803 2.917460498918614e-07 6.534995015391525 -0.0645341813235234 TLSDYNIQK ddPTM_A549_MK2206_60min_R1 2 TLSDYNIQK 9 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;A0A2R8Y422;M0R1M6;P62987;M0R2S1 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 ; 185.47 1.1268e-10 47748000.0 12097.5 13512.2 13420.7 12241.1 16758.3 12455.1 11057.6 12286.4 18196.1 17001.1 15186.9 False True 14139.262244521646 14199.91326472744 15323.957065553475 15240.170049523855 14293.176269585776 13773.090414973742 13066.622788107243 14028.034825521943 14074.712403200814 13160.539702223254 11415.573592882954 1.2385941126372113 1.2439071194442988 1.342372938238268 1.3350332268038942 1.2520769239748815 1.206517596589328 1.1446312952906401 1.2288506321108323 1.232939570550857 1.1528583820289329 1.0 13.47871573134311 -14.742059505921956 0.18658122785417622 2.9871692170114667e-06 1.301810274311067 0.4557016780473532 0.066364609449 14.950656652814338 0.18463931323579894 5.459814976056475 0.05394130116450945 1.811091924423203e-15 14.742059505921956 1.30180728714185 TLSDYNIQK ddPTM_A549_PD325901_60min_R1 2 TLSDYNIQK 9 0 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;A0A2R8Y422;M0R1M6;P62987;M0R2S1 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 0 ; 156.94 3.4608000000000005e-05 98479000.0 12284.5 11127.3 11599.0 11934.1 14749.7 14025.8 14461.900000000001 13469.4 13281.9 13445.9 13937.3 False True 13531.613396629074 12065.036622262744 12386.177890453155 12671.242252692397 13713.731955702628 13911.578535039162 15012.255518355341 13200.742250460105 12723.707932051415 12596.923579308357 12223.100455824007 1.107052457396895 0.987068433730662 1.0133417405198077 1.0366635125423402 1.1219519961621824 1.138138280489271 1.2281871995253357 1.079983126880895 1.040955850607354 1.030583330705282 1.0 13.577322658559766 -9.001300627114983 2.3005615899438006 1.0154897470963804 1.088336648447091 0.18243970495123496 0.06235654988713569 0.36111683174499154 3.8450326552875085 0.01330910098200599 0.013326266017573876 9.97009675347501e-10 9.001300627114983 0.0728469013507107 TLSGGRPGAGPELELGTAGS(ph)PGGAPPEAAPGDCTR ddPTM_A549_MK2206_60min_R1 2 TLSGGRPGAGPELELGTAGSPGGAPPEAAPGDCTR 35 1 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 TLSGGRPGAGPELELGT(0.003)AGS(0.997)PGGAPPEAAPGDCTR;TLSGGRPGAGPELELGT(0.001)AGS(0.999)PGGAPPEAAPGDCTR 146.37 3.5024e-40 21438400.0 1998.1999999999998 2459.9 2344.8 2048.52 3870.7 2627.7 2893.5 1970.4499999999998 3943.5 3173.2 4086.2000000000003 True False 2335.447308700406 2585.0984029175893 2677.327898493355 2550.407491961558 3301.325157485286 2905.761469873906 3419.211495929341 2249.76732175004 3050.303546475478 2456.371916116888 3071.4837666171707 0.7603645293794242 0.8416448203353945 0.871672488584263 0.8303503081087391 1.0748307360000326 0.9460448729879548 1.1132116448380731 0.7324692209680335 0.9931042382929408 0.7997346242927579 1.0 11.584720043063125 -6.738396033775441 24.492294788080752 0.9859090605354672 0.8303865782798006 0.19337925767002506 0.10936990523168809 143.89875521920786 152945.8731315642 0.012533414713399629 0.026075563826507355 1.8264339287330624e-07 6.738396033775441 -0.15552248225566667 TLSGGRPGAGPELELGTAGS(ph)PGGAPPEAAPGDCTR ddPTM_A549_PD325901_60min_R1 2 TLSGGRPGAGPELELGTAGSPGGAPPEAAPGDCTR 35 1 Q8WYP3-2;Q8WYP3 Q8WYP3-2 RIN2 Ras and Rab interactor 2 1 TLSGGRPGAGPELELGTAGS(1)PGGAPPEAAPGDCTR;TLSGGRPGAGPELELGT(0.005)AGS(0.995)PGGAPPEAAPGDCTR 206.16 8.8089e-90 38911000.0 4133.0 4753.8 4339.1 3976.4 4664.2 5614.4 4814.7 4910.7 4604.6 4568.3 5333.4 True False 4552.57911744621 5154.419409462549 4633.577419127965 4222.013196940368 4336.602682616474 5568.678187848385 4997.926043204933 4812.752236130377 4411.084674927835 4279.856758369043 4677.425611208179 0.9733087163454169 1.1019778480520104 0.9906255714735166 0.9026360968357169 0.9271345058326496 1.1905433994513053 1.0685206903619722 1.028931860422948 0.9430582208208442 0.9150026348069608 1.0 12.191498993992507 -8.742115986826466 24.551982512166536 0.9731108261331574 1.024415816781056 0.1216598675444629 0.0789880882841437 402.00906247434415 510785.18769036664 0.013687192695458103 0.015507413476130598 1.810856403450819e-09 8.742115986826466 0.05130499064789862 TLSGS(ph)PRPK ddPTM_A549_MK2206_60min_R1 2 TLSGSPRPK 9 1 Q8TDN4;Q8TDN4-2;V9GYB4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 T(0.041)LS(0.037)GS(0.922)PRPK;T(0.006)LS(0.024)GS(0.97)PRPK 55.401 0.0049491000000000005 30977000.0 6014.6 6206.0 6519.0 5851.4 8845.8 6400.4 5989.8 6093.9 9182.8 9340.0 9323.1 True False 7029.717437148163 6521.858892030797 7443.492225468346 7284.993262679324 7544.5945379604045 7077.686079758328 7078.069126772966 6957.728986786052 7102.9104619183545 7230.087513088283 7007.916965529966 1.0031108347495308 0.9306415763928203 1.0621547404286975 1.0395376113204853 1.076581611207754 1.0099557564068664 1.010010415589691 0.9928383884982122 1.0135551686550563 1.0317027939473475 1.0 12.774769965690238 -7.503247538280635 24.703530115970032 1.0057683442260923 1.022747517246862 0.024604214484854503 0.03637398276910308 1950.5762289850818 2454570.870949392 0.0054595955021617655 0.008646208948537043 3.13871918319269e-08 7.503247538280635 0.01697917302076979 TLSGS(ph)PRPK ddPTM_A549_PD325901_60min_R1 2 TLSGSPRPK 9 1 Q8TDN4;Q8TDN4-2;V9GYB4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 TLS(0.001)GS(0.999)PRPK;T(0.001)LS(0.028)GS(0.971)PRPK 87.641 0.00031822 55272000.0 10238.0 10149.0 10217.7 9509.2 12425.0 10848.9 10833.1 11050.2 11617.5 11083.3 11090.8 True False 11277.35422318275 11004.291847918601 10911.134566021485 10096.561687039884 11552.310863923005 10760.55015534133 11245.359548599787 10829.795092285805 11129.256875944506 10383.498546512183 9726.701910373806 1.1594222098196645 1.1313487294374889 1.1217712505802657 1.0380251990936016 1.1876904392024326 1.1062897017400004 1.1561328446393828 1.113408757878713 1.1441963554033494 1.067525112025679 1.0 13.247734989551136 -10.744348068327671 0.8233485628742226 0.9934173273435754 1.128425419019333 0.41085128527674686 0.04104667774961131 0.34597595736167785 0.38333103949864933 0.03034908919979958 0.006430590925495914 1.801573278687893e-11 10.744348068327671 0.13500809167575767 TLSGS(ph)RPPLLR ddPTM_A549_PD325901_60min_R1 1 TLSGSRPPLLR 11 1 O00418;H3BRH4 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 T(0.316)LS(0.316)GS(0.368)RPPLLR 51.875 0.006630199999999999 6926900.0 673.3 511.04 636.87 536.6 387.52 552.36 588.99 441.95 638.73 510.79 611.62 True False 741.6529203427368 554.1071342950358 680.0918280104236 569.744563292979 360.3019320714241 547.8617632943747 611.4043367576948 433.13496054693184 611.8863993434079 478.53863222803307 536.3946173786229 1.3826628685560225 1.0330214292659656 1.2678945798040506 1.062174274002484 0.6717105660609176 1.021378189758488 1.139840551990709 0.8074931151689698 1.1407392608332194 0.8921391392155763 1.0 9.067150949910232 -6.374994489291668 5.996123999957576 1.0219925475433884 1.207118390999317 0.30759504851124597 0.15936506642098003 0.27266003010965495 12.589428724202381 0.021904523066204256 0.05146498592506435 4.2170185431669056e-07 6.374994489291668 0.18512584345592864 TLSKEEETKK ddPTM_A549_PD325901_60min_R1 1 TLSKEEETKK 10 2 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 47.288000000000004 0.011149 19356000.0 10003.0 7665.3 5631.3 5578.9 8279.0 9362.4 6576.8 6623.9 6905.7 7362.6 7694.0 False True 11018.497196180599 8311.281732372689 6013.47388175781 5923.495982398812 7697.51160099948 9286.155718493825 6827.083722963053 6491.781118150979 6615.4774442186335 6897.724179490827 6747.686776284497 1.632929559639067 1.2317231086634937 0.8911904303105531 0.8778558013714572 1.1407630283096792 1.376198396038634 1.0117665430110963 0.9620750537750319 0.9804067176724136 1.022235383499669 1.0 12.72017729077289 -5.377182821671532 2.9162073811313074 1.0136627145177033 1.6682132952504782 0.6422982424854191 0.13120090780999383 0.14789088160466868 1.9588424871943593 0.0187184917879023 0.1946878892433339 4.1958231840576736e-06 5.377182821671532 0.654550580732775 TLSKSEHS(ph)LFQAK ddPTM_A549_MK2206_60min_R1 2 TLSKSEHSLFQAK 13 1 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 T(0.217)LS(0.188)KS(0.188)EHS(0.407)LFQAK;T(0.182)LS(0.157)KS(0.118)EHS(0.544)LFQAK 100.42 6.4459e-05 12755700.0 3347.9 4045.1 3950.5 4000.0 5395.700000000001 3805.1 4338.3 3609.7 6421.0 5832.3 5997.4 True False 3912.9436717035796 4250.978311980947 4510.740303223304 4980.000179566823 4601.999677640567 4207.753156379042 5126.512954135221 4121.386029242618 4966.65375223001 4514.779379291734 4508.080060180566 0.8679845121354947 0.94296868184073 1.0005901055454263 1.1046831717907324 1.0208336179052329 0.9333803082925961 1.1371832100803205 0.9142220134124106 1.1017226149331243 1.001486069240505 1.0 12.13829742160076 -5.605906143432319 2.045479031618432 1.0389075966979062 0.8673041605475291 0.33561341761291874 0.06639273483217834 0.30141857751904544 2.1190369785096808 0.009069992143670281 0.07380769738821284 2.477957517944305e-06 5.605906143432319 -0.1716034361503771 TLSKYES(ph)SEIR ddPTM_A549_PD325901_60min_R1 1 TLSKYESSEIR 11 1 A6PWM2;Q6UXH1-3;Q6UXH1-2;Q6UXH1-4;Q6UXH1;Q6UXH1-6;Q6UXH1-5 A6PWM2 CRELD2 Cysteine-rich with EGF-like domain protein 2 1 T(0.001)LSKYES(0.928)S(0.071)EIR 79.337 0.00027117 22102000.0 5813.8 6519.0 6808.2 5946.4 7397.9 7475.2 6916.3 7559.7 7149.1 6557.8 6722.0 True False 6404.012696106652 7068.379008432487 7270.245393032428 6313.695622745751 6878.2970253695 7414.3244495946565 7179.503581244578 7408.91585303008 6848.648188664936 6143.73938883885 5895.236614268832 1.086302911168379 1.1989983559479498 1.2332406430363667 1.0709825636962698 1.1667550389277452 1.257680553762511 1.217848247832378 1.2567631017722916 1.1617257519551405 1.0421531468251064 1.0 12.525334003784277 -10.25563079052402 0.8229990709839701 1.0067629729623542 1.1860139603340376 0.5170019716972171 0.05986270046451431 0.32738959957891733 0.42706617253143725 0.03221619979306912 0.011954199598217774 5.550974208532606e-11 10.25563079052402 0.17925098737168343 TLSNAEDYLDDEDS(ph)D ddPTM_A549_PD325901_60min_R1 2 TLSNAEDYLDDEDSD 15 0 Q92882 Q92882 OSTF1 Osteoclast-stimulating factor 1 1 TLSNAEDYLDDEDS(1)D;TLSNAEDYLDDEDS(1)D 196.84 1.9674999999999998e-38 28089000.0 8513.0 8247.6 8195.7 8363.7 9174.5 9747.2 8488.5 8119.5 7786.799999999999 7982.6 8089.299999999999 True False 9377.233493060625 8942.65419695472 8751.909486747734 8880.306753659139 8530.114770306775 9667.822034873865 8811.53451258543 7957.550202875471 7459.547875326422 7478.577273680959 7094.367382297661 1.3217857192537454 1.2605287709329838 1.2336419887960812 1.2517404688990132 1.2023784941828197 1.36274617790413 1.2420465473176028 1.1216715704252478 1.0514747085046632 1.0541570334152703 1.0 12.792458326930555 -8.478916333537724 1.9093013783032422 1.0218368665434177 1.26864902693107 0.8562803597346382 0.042640090115959754 0.07914819588918418 0.565320343086425 0.007676801688894747 0.00915749685533373 3.3195840289666667e-09 8.478916333537724 0.2468121603876523 TLSPT(ph)PASATAPTSQGIPTS(ph)DEESTPKK ddPTM_A549_PD325901_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 2 T(0.281)LS(0.313)PT(0.384)PAS(0.017)AT(0.004)APT(0.001)S(0.001)QGIPT(0.172)S(0.817)DEES(0.007)T(0.002)PKK 98.34200000000001 1.4815e-10 8519500.0 1602.9 1783.9 1486.7 1909.6 2104.1 2327.6 1761.7 2226.3 2283.6 2069.9 2332.3 True False 1765.6252280073863 1934.2355135975945 1587.596402253358 2027.5516549837357 1956.3152747509375 2308.644797313321 1828.74245753923 2181.8947000014377 2187.6282334329153 1939.206160748657 2045.441885667836 0.8631998984566166 0.9456321038258524 0.7761630449525132 0.9912536108654785 0.9564267205333977 1.1286777754429083 0.89405740165634 1.0667106776729811 1.069513755810596 0.9480622130290967 1.0 10.998196833156763 -6.553327160364007 2.525019980538801 1.029188754504484 0.8708480075220113 0.4039631760103961 0.07423669867242004 0.17100161673577619 2.1870721035922576 0.00948910084945263 0.023156189052256162 2.7968736001925903e-07 6.553327160364007 -0.1583407469824727 TLSPT(ph)PASATAPTSQGIPTSDEESTPKK ddPTM_A549_PD325901_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 T(0.02)LS(0.107)PT(0.873)PASATAPTSQGIPTSDEESTPKK 169.39 4.4426e-57 10051000.0 854.07 1005.3 1154.3 1085.4 1669.2 898.48 1217.5 1315.0 1328.5 1411.3 1619.3 True False 940.7745576668972 1090.0201591006569 1232.6377393697792 1152.4426928777482 1551.961150427388 891.1630767700949 1263.8326287415641 1288.7712934024557 1272.667764983196 1322.190277146036 1420.1363655884434 0.6624536773108269 0.7675461212832188 0.8679713929155156 0.8115014309912595 1.092825441297901 0.6275193695225425 0.8899375154145048 0.9074982689204247 0.8961588448978682 0.9310305046643723 1.0 10.471813752781067 -2.000000000000624 0.09757783207694029 1.076289562464874 0.1179802261450865 0.28082919821539065 0.11067281167716023 98.04560535184787 0.6594376165688575 0.7432651348214742 12.622012871385907 0.009999999999985633 2.000000000000624 -0.9583093363197875 TLSPT(ph)PSAEGYQDVRDR ddPTM_A549_MK2206_60min_R1 1 TLSPTPSAEGYQDVRDR 17 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-3;O14639-5;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;A0A494C1P1;A0A494C1G0;H0Y7N6;F6XFR5 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 T(0.002)LS(0.347)PT(0.649)PS(0.002)AEGYQDVRDR 124.2 1.5496e-10 20037000.0 1775.1 2685.0 2188.2 1908.4 2963.1 2327.5 1914.3 2107.4 3921.8 3912.6 3685.1 True False 2074.69348297172 2821.65503143775 2498.5196637168024 2375.958085671331 2527.231915194836 2573.7945051305405 2262.1035308994437 2406.1304036418255 3033.518561827699 3028.7409425812843 2769.987966414014 0.7489900707610612 1.0186524510756714 0.9019965768845377 0.857750327611427 0.9123620556614018 0.9291717279416695 0.8166474216954559 0.86864290849493 1.0951378123692168 1.0934130325852094 1.0 11.435663993487982 -8.75426700369047 24.99535710372071 1.0449261908241174 0.8866406924406934 0.574968835384807 0.06877451585077206 92.2073106980596 321337.41650888405 0.01147846390192946 0.012883506699266524 1.7608931187235012e-09 8.75426700369047 -0.15828549838342398 TLSPTPASATAPTSQGIPT(ph)S(ph)DEESTPKK ddPTM_A549_MK2206_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 2 TLSPTPASAT(0.002)APT(0.009)S(0.009)QGIPT(0.495)S(0.495)DEES(0.495)T(0.495)PKK 55.06100000000001 0.0022153000000000003 4033500.0 203.24 282.2 451.73 216.35 413.47 358.45 564.78 252.29 514.84 375.12 651.73 True False 237.54194325906843 296.56277462634375 515.7921066131025 269.35575971232066 352.6491107203969 396.380941080147 667.393215369267 288.0528801057211 398.2295620305402 290.38013146784544 489.887454167052 0.4848908483744645 0.6053691967486385 1.0528787831280468 0.5498319204158884 0.7198574034111583 0.8091265406135116 1.3623398796852744 0.5879980751813555 0.8129001031627636 0.5927486588967138 1.0 8.93630653499267 -7.522695441425907 24.999980666320216 0.9183191188627056 0.6987773828991568 0.10912869303331096 0.23979857952271336 8.561151028144277 1167654.1407244971 0.03278628508953677 0.04892221319716213 3.001266485423774e-08 7.522695441425907 -0.21954173596354876 TLSPTPASATAPTSQGIPTS(ph)DEESTPKK ddPTM_A549_MK2206_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 TLSPTPASATAPTSQGIPT(0.032)S(0.555)DEES(0.207)T(0.207)PKK 139.61 1.8014999999999999e-28 19008000.0 1768.0 1633.7 1657.3 1515.3 2658.0 1585.9 1668.1 1406.7 3065.1 2412.0 2223.2 True False 2066.3951765500547 1716.8483519031113 1892.3300606333335 1886.548568024402 2267.0117210313083 1753.718885364779 1971.1721777638616 1606.1040328380734 2370.859743958915 1867.127524793247 1671.118082801452 1.236534508133598 1.0273650734632693 1.1323736366140227 1.1289139812680404 1.3565838012062583 1.049428465536592 1.1795528981766512 0.9610954781517358 1.4187266407795793 1.1172923948397506 1.0 10.706597963873945 -6.561496349303617 24.995215877053855 1.1824561970832717 1.1231217328947898 0.0 0.138991006130386 599.419450380019 387972.2827827667 0.024481492408831663 0.050962346795887896 2.744755415902826e-07 6.561496349303617 -0.05933446418848187 TLSPTPASATAPTSQGIPTS(ph)DEESTPKK ddPTM_A549_PD325901_60min_R1 2 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 TLSPTPASATAPTSQGIPT(0.133)S(0.864)DEES(0.003)TPKK;TLSPTPASATAPTSQGIPT(0.14)S(0.852)DEES(0.003)T(0.004)PKK 134.77 1.103e-27 54018000.0 1567.33 1480.46 1617.48 1014.7 1852.64 1411.02 1911.61 1689.8400000000001 1339.5900000000001 1812.9899999999998 1508.6 True False 1726.4441877926374 1605.223559874822 1727.2519194973843 1077.3757144490983 1722.5169576610324 1399.5291209421891 1984.3573646231293 1656.134815546165 1283.2916908497104 1698.5175019931914 1323.051763803326 1.304895420591629 1.2132734363018025 1.3055059270939784 0.814311082849856 1.3019271088149864 1.0578037528320259 1.4998335053186231 1.2517536054563263 0.9699482106132274 1.2837876404098723 1.0 10.369653792175455 -8.764669275282756 24.989302774314453 0.9858088623484269 1.214685552381355 0.02516971417910674 0.18606904395954754 74.25939005454683 574533.8339668945 0.02694502961252882 0.02927142797768821 1.7192171100986387e-09 8.764669275282756 0.228876690032928 TLSS(ph)PSLQTDGIAATPVPPPPPPK ddPTM_A549_PD325901_60min_R1 1 TLSSPSLQTDGIAATPVPPPPPPK 24 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 T(0.038)LS(0.171)S(0.784)PS(0.007)LQTDGIAATPVPPPPPPK 155.46 6.6044e-34 8294800.0 1533.6 1585.2 1414.1 1819.7 2292.8 2187.8 1669.9 1685.2 2068.4 2008.4 2165.1 True False 1689.28994302335 1718.7903672598832 1510.069329674093 1932.098736161451 2131.761637730597 2169.9832821627783 1733.4489583043419 1651.5873639861745 1981.472341054757 1881.5892812443128 1898.8064256997081 0.8896588510336689 0.9051951499619088 0.7952729194697317 1.0175332830198711 1.1226850767292118 1.1428143768594747 0.9129150474965176 0.8698029149430365 1.0435357255148252 0.9909326489407414 1.0 10.89087712173578 -6.280975527117925 23.534611182469714 1.0183770215044907 0.8675576026700818 0.4133777836483594 0.07886468852417555 272.92917000436444 328789.4816160299 0.011503188975466655 0.026776066313762167 5.236299427695038e-07 6.280975527117925 -0.15081941883440897 TLSS(ph)PSNRPSGETSVPPPPAVGR ddPTM_A549_MK2206_60min_R1 2 TLSSPSNRPSGETSVPPPPAVGR 23 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 T(0.006)LS(0.046)S(0.887)PS(0.061)NRPSGETSVPPPPAVGR;T(0.008)LS(0.011)S(0.892)PS(0.088)NRPSGETSVPPPPAVGR 207.77 1.4637999999999998e-64 272400000.0 13791.7 15691.2 15444.5 15473.4 20059.2 16965.7 16334.3 15777.2 24715.0 22797.0 24756.0 True False 16119.40178530847 16489.815057465934 17634.762337206 19264.38369462732 17108.518252261572 18760.9991130798 19302.030875396107 18013.66641564857 19117.091961745 17647.141866795882 18608.401969158305 0.8662432062691293 0.8861489065421237 0.9476774183207123 1.0352519107528009 0.9193975001516707 1.0082004432285163 1.0372750388446803 0.9680394074410338 1.0273365758881285 0.948342683914738 1.0 14.183666546168386 -5.368967528065981 0.6866424858507368 1.0101190190842184 0.7705367763072768 0.5468525501239129 0.03834764615583902 1.050083933058624 0.3706816816866738 0.00529666230106618 0.18928932134704513 4.2759485596345595e-06 5.368967528065981 -0.23958224277694162 TLSS(ph)PSNRPSGETSVPPPPAVGR ddPTM_A549_PD325901_60min_R1 2 TLSSPSNRPSGETSVPPPPAVGR 23 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 TLS(0.033)S(0.76)PS(0.207)NRPSGETSVPPPPAVGR;T(0.013)LS(0.142)S(0.831)PS(0.013)NRPSGETSVPPPPAVGR 183.44 3.7893e-50 404980000.0 11589.400000000001 11439.3 10114.2 12183.400000000001 14322.4 12350.3 11053.8 12574.1 11535.3 12422.9 14015.4 True False 12765.947356334656 12403.329957226837 10800.610433625421 12935.94094749102 13316.444033597667 12249.723251528922 11474.458407871456 12323.299711309373 11050.511456086308 11638.51597389462 12291.594650940695 1.0385916326452937 1.009090383262646 0.8786988784078422 1.052421700751498 1.0833780653984175 0.9965934933097904 0.9335207297120962 1.0025794098543799 0.8990299281664479 0.9468678641305428 1.0 13.585384475549992 -7.625131690731331 6.2092678754199 0.9545134450684231 1.0101354878924953 0.19251024256375804 0.054952436813871054 0.309843494792372 16.39291679820702 0.009388683227365578 0.013966317226740113 2.370654745122304e-08 7.625131690731331 0.05562204282407224 TLSS(ph)PTEPVKR ddPTM_A549_PD325901_60min_R1 2 TLSSPTEPVKR 11 1 J3QQN1;P40306 J3QQN1 PSMB10 Proteasome subunit beta type-10 1 T(0.039)LS(0.311)S(0.65)PT(0.001)EPVKR;T(0.002)LS(0.208)S(0.789)PT(0.001)EPVKR 71.806 0.00096923 28016000.0 6289.9 6435.3 6541.4 7113.799999999999 6806.200000000001 6540.0 6179.0 7329.6 7548.6 7779.0 7983.0 True False 6928.446017620355 6977.625315687316 6985.338740633699 7553.203269387992 6328.155992115316 6486.740408330088 6414.145226278535 7183.405378040037 7231.358592963612 7287.832612427559 7001.141608406436 0.9896166089971964 0.9966410774078783 0.9977428155782819 1.0788530916613204 0.9038748744229012 0.9265260969070109 0.9161570476701857 1.0260334356635141 1.032882777900214 1.0409491794419479 1.0 12.77337447221965 TLSSFFT(ph)PR ddPTM_A549_MK2206_60min_R1 4 TLSSFFTPR 9 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28 P18858 LIG1 DNA ligase 1;DNA ligase 1 TLSSFFT(1)PR;TLSSFFT(1)PR;TLSSFFT(1)PR;TLSSFFT(1)PR 177.78 5.7187999999999996e-08 64947000.0 5267.44 5668.2 5251.99 5415.65 8818.939999999999 5997.11 6182.59 6161.92 9033.26 8211.28 7822.13 True False 6156.455095456345 5956.687169160323 5996.80115558176 6742.484493117769 7521.685608379175 6631.720199640567 7305.886574258781 7035.391030088568 6987.241033152037 6356.346145018364 5879.67924119455 1.0470732914004275 1.0130973008572024 1.0199197795632498 1.1467435920446447 1.2792680178334057 1.1279050995124063 1.2425654996741753 1.1965603464891084 1.188371124771165 1.0810702224169242 1.0 12.52152173738354 -6.2569660691805 23.484222284047743 1.1288590519074555 1.0253368257991011 0.32645829128344117 0.0760011884617624 225.92540641982652 1186058.7167506716 0.014007888082237737 0.03566361229565321 5.533933433735127e-07 6.2569660691805 -0.10352222610835438 TLSSFFT(ph)PR ddPTM_A549_PD325901_60min_R1 2 TLSSFFTPR 9 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28 P18858 LIG1 DNA ligase 1;DNA ligase 1 TLSSFFT(1)PR;TLSSFFT(1)PR 161.17 8.0009e-06 115132000.0 4823.0 4868.3 5204.6 4823.700000000001 5171.6 5062.1 5111.6 5375.5 5363.299999999999 4715.4 4525.3 True False 5312.627409495056 5278.568726300337 5557.815453802265 5121.648993582457 4808.364657051445 5020.875935933906 5306.124735174844 5268.281435501827 5137.899152378153 4417.668839264803 3968.716788240217 1.3386259823923459 1.3300441951265882 1.4004061640958454 1.2905050339592172 1.2115665877946256 1.2651131848993011 1.336987499560948 1.3274521001630493 1.2945995964243062 1.1131227232829726 1.0 11.954456898453687 -10.635947640137406 0.5613597930169195 0.9529035136414118 1.3177111182663237 0.7427750293490649 0.056131402263378094 0.350292601251504 0.16056874958206566 0.06604296485595573 0.011444062589705926 2.3123435565373705e-11 10.635947640137406 0.3648076046249119 TLSSS(ph)SMDLSR ddPTM_A549_MK2206_60min_R1 6 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 T(0.033)LS(0.141)S(0.178)S(0.57)S(0.079)MDLSR;T(0.004)LS(0.055)S(0.203)S(0.656)S(0.081)MDLSR;TLS(0.004)S(0.098)S(0.858)S(0.04)MDLSR;T(0.011)LS(0.069)S(0.204)S(0.624)S(0.092)MDLSR;TLSS(0.06)S(0.936)S(0.004)MDLSR;TLSS(0.019)S(0.88)S(0.101)MDLSR 219.92 8.7573e-32 315147000.0 42256.40000000001 42838.600000000006 39450.8 39724.0 54223.8 42685.8 40623.3 41125.0 61786.0 58688.2 60848.700000000004 True False 49388.2472502091 45018.90176154536 45045.516657233726 49456.38178327811 46247.55084983353 47202.783023459204 48004.02777348761 46954.594690030404 47791.569651967504 45430.49485927492 45738.28845131376 1.0798009484500177 0.9842716744739115 0.9848535697872154 1.0812906091998191 1.0111342688098583 1.0320190068700172 1.0495370377618223 1.0265927361932519 1.0448919552999751 0.9932705485390764 1.0 15.481114759968877 -5.229599830956845 23.452263356442693 1.023477799993947 1.0798011815850725 0.2514921954552931 0.028931935466931718 6538.735037558449 4816093.989577428 0.003859907678490286 0.6729535132022729 5.893864796511187e-06 5.229599830956845 0.05632338159112549 TLSSS(ph)SMDLSR ddPTM_A549_PD325901_60min_R1 6 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 T(0.003)LS(0.036)S(0.133)S(0.813)S(0.015)MDLSR;T(0.008)LS(0.032)S(0.185)S(0.767)S(0.008)MDLSR;TLSS(0.058)S(0.938)S(0.004)MDLSR;TLSS(0.069)S(0.898)S(0.032)MDLSR;TLSS(0.009)S(0.683)S(0.308)MDLSR;TLSS(0.032)S(0.936)S(0.032)MDLSR 228.12 1.0163e-39 526249000.0 50275.899999999994 52946.0 57142.399999999994 54689.700000000004 61771.0 57897.1 58926.1 60561.0 59707.5 61206.3 64959.2 True False 55379.87235683861 57407.94523400319 61020.42688916544 58067.758559679525 57432.418058381365 57425.60521332229 61168.56498109918 59353.06334581461 57198.20141342427 57341.72377246749 56969.630210296324 0.9720946432759118 1.0076938365597403 1.071104493111788 1.0192756797846432 1.0081234132357313 1.0080038259216848 1.0737047924535057 1.0418369072560265 1.004012158799069 1.0065314372025522 1.0 15.797905421259102 -8.868134593985204 7.993803202442839 1.0017765667109848 1.0264227753648165 0.1061212813761383 0.027837688890703784 0.3599173941677053 24.661091567709068 0.004883073301737989 0.005188503879446229 1.3547694851126909e-09 8.868134593985204 0.024646208653831714 TLSSS(ph)SMDLSRR ddPTM_A549_MK2206_60min_R1 1 TLSSSSMDLSRR 12 1 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 T(0.01)LS(0.05)S(0.031)S(0.871)S(0.039)MDLSRR 84.759 0.00018967 6151400.0 1105.9 1836.5 1600.6 1146.9 2383.5 1430.7 1243.9 875.05 2726.8 2301.5 2611.0 True False 1292.5488833408958 1929.9700056742759 1827.589148041822 1427.8905514862984 2032.8903074033583 1582.0957243782018 1469.9005286976007 999.0910172282332 2109.184153804826 1781.5895515388302 1962.6166400659383 0.6585844922304693 0.9833657609309958 0.9312002714806393 0.7275443009788837 1.0358061100180314 0.8061155154197857 0.7489493865945294 0.5090607084604494 1.0746796448918132 0.9077623796560564 1.0 10.938562681873588 TLSSSSMDLS(ph)R ddPTM_A549_PD325901_60min_R1 2 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 TLSSSSMDLS(0.999)R;TLS(0.002)S(0.004)S(0.01)S(0.024)MDLS(0.96)R 52.735 0.0078613 8143400.0 3711.1 3892.7 3345.7 3180.9 4759.3 3475.9 3335.9 3538.2 4029.8 4569.8 4898.4 True False 4087.848140032572 4220.75149043184 3572.7593213284854 3377.3769686519536 4425.023186693663 3447.59342283097 3462.849499974522 3467.6278253357964 3860.441520006987 4281.262048113055 4295.927853515984 0.9515634990673528 0.9825005526983848 0.8316618535398298 0.7861810262683424 1.030050628776743 0.8025259130013792 0.8060772010266345 0.8071894928351115 0.8986281082088996 0.9965861145943302 1.0 12.068754049342788 -10.098536091668208 0.9465876226925154 0.9900623592570535 0.8759718084307082 0.2587104193571834 0.07799369025218719 0.5274162518499311 0.9461916006199494 0.032033811490101635 0.015196784746130801 7.970102529886132e-11 10.098536091668208 -0.11409055082634534 TLSTS(ph)DDVEDRENEK ddPTM_A549_MK2206_60min_R1 1 TLSTSDDVEDRENEK 15 1 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 TLS(0.144)T(0.336)S(0.52)DDVEDRENEK 198.23 1.4267999999999999e-38 6903000.0 2494.2 2347.2 2001.2 1430.1 2389.5 1993.5 1574.7 1650.9 2184.9 2030.5 2298.6 True False 2915.159982664675 2466.6624542982086 2285.000251818876 1780.4745641996276 2038.0077153515106 2204.450846821796 1860.8026067530438 1884.9201306692096 1690.0236385683468 1571.8086397565041 1727.7941818673166 1.6872148391622148 1.42763674064023 1.322495628124733 1.0304899639581935 1.179543105735505 1.275875836344889 1.0769816372121233 1.0909402001991226 0.9781394429409704 0.9097198359921371 1.0 10.75471565581842 -2.0000000000020104 0.3357338779571523 0.9910986431417012 8.392360720619367 0.8498697825481114 0.08546526316049345 12.835042505956162 0.15919660916223957 0.02355715572298815 60.24597516259531 0.009999999999953709 2.0000000000020104 7.401262077477666 up TLSVAAAFNEDEDS(ph)EPEEMPPEAK ddPTM_A549_MK2206_60min_R1 4 TLSVAAAFNEDEDSEPEEMPPEAK 24 0 Q8WW12 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK 146.34 2.0173999999999998e-28 72230600.0 9077.1 8885.2 8862.1 8271.5 12378.7 8928.3 9533.4 9046.7 13976.8 13114.4 13807.4 True False 10609.092566211819 9337.418728242346 10118.879038398996 10298.01787132175 10557.80962796473 9873.08677987411 11265.495377671605 10329.097429356792 10811.077116363243 10151.84793165364 10378.641515146082 1.0222043560064606 0.899676389690864 0.9749714376040447 0.9922317729438218 1.0172631565082173 0.9512889298147362 1.085449898354355 0.9952263419333843 1.0416659155811563 0.9781480472987267 1.0 13.341329997848048 -6.673959105641683 1.104330663821604 1.020075401055563 0.9584043526738362 0.14848147236109677 0.04246422364349175 0.5077888761368436 1.1852118303746166 0.006020891272300541 0.020065238346210823 2.1185606153286334e-07 6.673959105641683 -0.06167104838172688 TLSVAAAFNEDEDS(ph)EPEEMPPEAK ddPTM_A549_PD325901_60min_R1 6 TLSVAAAFNEDEDSEPEEMPPEAK 24 0 Q8WW12 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK 180.26 8.6082e-43 146066100.0 17752.839999999997 18054.29 17825.5 19306.07 22820.9 19911.14 20123.7 20580.1 21635.29 21963.2 22644.34 True False 19555.095247849935 19575.78837983627 19035.245623439325 20498.562096633785 21218.03871183104 19748.990277357425 20889.518415611175 20169.613760723874 20726.034000047654 20576.43980373683 19859.22973429816 0.9846854842550633 0.9857274749195148 0.9585087577976018 1.0321932104562674 1.0684220383022274 0.9944489560564204 1.0518795892437682 1.0156292077073696 1.0436474262771869 1.0361146972483029 1.0 14.27752204672295 -6.270079029132711 24.915895995055052 1.0250670089605656 0.9772492622972638 0.5389724509256382 0.02184639759983359 389.8387047943532 1124256.7279141974 0.003302754197900236 0.007776234777675266 5.369340808855488e-07 6.270079029132711 -0.04781774666330174 TLSVS(ph)R ddPTM_A549_MK2206_60min_R1 1 TLSVSR 6 0 Q69YQ0-2;Q69YQ0;A0A494C1J1 Q69YQ0-2 SPECC1L Cytospin-A 1 TLSVS(1)R 75.692 0.045644 9100400.0 1637.9 1705.7 1350.3 1696.1 2265.1 1412.7 1428.8 1433.3 2262.7 1939.1 2165.3 True False 1914.3374771896688 1792.5128443662477 1541.7928443089295 2111.6445761408218 1931.906790559827 1562.1909763256353 1688.3944653132348 1636.4746642971568 1750.202062789416 1501.0559632365614 1627.5962507601591 1.176174666349587 1.1013252479102635 0.9472821306812695 1.297400737532168 1.1869693049842929 0.9598148039454032 1.0373546046967608 1.0054549238073331 1.0753293772776846 0.922253269221714 1.0 10.668527146878438 -7.254952058312324 24.97302872999895 1.0293044023684423 1.1374146870128061 0.3633401624699515 0.08888489792634624 528.3177441322006 2033765.1140713566 0.012338742219918616 0.021047350949809092 5.559656268259547e-08 7.254952058312324 0.10811028464436379 TLT(ph)AEEAEEEWER ddPTM_A549_MK2206_60min_R1 2 TLTAEEAEEEWER 13 0 P35269;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 TLT(1)AEEAEEEWER;TLT(1)AEEAEEEWER 155.08 2.6780000000000003e-18 13839900.0 1061.26 1086.67 685.51 823.3900000000001 2372.2 2212.43 2025.4900000000002 2273.0 2780.3 3161.0 2585.8 True False 1240.3747426841123 1141.9768614571553 782.7256259366169 1025.120586963382 2023.252522434338 2446.5478741078246 2393.4953146327694 2595.2047107705575 2150.5664892267714 2446.927904590155 1943.6744955505546 0.6381597049935929 0.5875350343235765 0.40270406785108653 0.5274137152646087 1.040942054374821 1.258723042211257 1.2314280606716512 1.3352054146470929 1.106443745673379 1.2589185638807547 1.0 10.924570917713424 -6.786175443113677 5.300942837345757 1.1044574662778668 0.5301333747041838 0.8617377261251268 0.12074679237026255 0.05720575903280717 4.326435991538777 0.01930551998958568 0.03812102226333617 1.6361554257824394e-07 6.786175443113677 -0.574324091573683 TLT(ph)AEEAEEEWER ddPTM_A549_PD325901_60min_R1 2 TLTAEEAEEEWER 13 0 P35269;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.127)LT(0.873)AEEAEEEWER;T(0.037)LT(0.963)AEEAEEEWER 222.29 5.836e-46 14872000.0 3022.6 2356.0 2617.3 2204.5 2279.0 2653.7 2301.44 1644.28 3510.1 3196.1 3762.8 True False 3329.4521268794842 2554.5483883827183 2794.92571710346 2340.666958217244 2118.9309021231816 2632.089147031431 2389.0225585962903 1611.4835454872946 3362.5827037015547 2994.2977005501602 3299.999454354472 1.0089250537560388 0.7741057002333429 0.846947327041358 0.7092931349211731 0.6421003795401158 0.7976029037090571 0.7239463495801146 0.48832842786106584 1.0189646241500137 0.907363089590537 1.0 11.688250070587674 -8.830629956463081 24.999996087570153 1.008956293723278 0.7489227151220993 0.3867064472885343 0.12512923065109294 28.891227337050857 10438.569759466329 0.02048924920385602 0.021812467014280083 1.4769644547959791e-09 8.830629956463081 -0.2600335786011788 TLT(ph)AEEAEEEWERR ddPTM_A549_MK2206_60min_R1 1 TLTAEEAEEEWERR 14 1 P35269;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.154)LT(0.846)AEEAEEEWERR 52.522 0.013397999999999998 5829700.0 0.0 169.84 0.0 119.33 232.26 291.97 302.13 184.72 345.66 323.64 324.78 True False 0.0 178.48413055470675 0.0 148.5658553569273 198.09486167296149 322.86607160599954 357.02311016593467 210.90462568127458 267.36856190559513 250.52949922225807 244.12816252800258 0.0 0.7311083191159227 0.0 0.608556808106423 0.8114379743067911 1.322526939385641 1.4624413114360886 0.8639094461585639 1.0951975353311676 1.0262212135952207 1.0 7.931494923221818 -6.73157272821392 2.351135141010282 1.0811653068536058 0.29475316682394076 0.6983415924404599 0.24643055804047614 0.123460362611433 1.3908162903478942 0.0339746180333272 0.07671240918776952 1.855356080104527e-07 6.73157272821392 -0.7864121400296651 TLT(ph)AEEAEEEWERR ddPTM_A549_PD325901_60min_R1 1 TLTAEEAEEEWERR 14 1 P35269;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.205)LT(0.795)AEEAEEEWERR 103.13 1.6082e-05 8775400.0 316.95 338.9 241.83 242.09 317.5 459.98 298.01 232.2 422.51 311.11 459.94 True False 349.1265306737423 367.46029236965353 258.242038041925 257.0433494737187 295.19989531553784 456.2340753858831 309.3509336273292 227.56858884262394 404.7533740181031 291.4664615056354 403.37029579988166 0.8655236498796368 0.9109750921073185 0.6402108452974509 0.6372391625020449 0.7318334998618519 1.1310552118895438 0.7669155038148944 0.5641679400099513 1.0034288053250893 0.7225779006053447 1.0 8.6559610375331 -8.879457123058744 24.721583376616596 1.00163149580209 0.7852835858826676 0.029280701482044202 0.16914818253843777 5.646611858434414 1171.7971636941238 0.02588421516657018 0.027555790533318848 1.319905616660004e-09 8.879457123058744 -0.21634790991942243 TLT(ph)EPSVDFNHSDDFTPISTVQK ddPTM_A549_MK2206_60min_R1 1 TLTEPSVDFNHSDDFTPISTVQK 23 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 T(0.06)LT(0.813)EPS(0.126)VDFNHSDDFTPISTVQK 248.95 5.0018999999999995e-110 26032000.0 3084.2 5324.1 5043.5 4842.5 7842.5 7468.6 6324.0 7214.5 9292.0 10008.0 10218.0 True False 3604.737558549591 5595.073948930254 5758.74413854113 6028.912717388087 6688.878638896932 8258.922294744561 7472.98894081809 8237.177468479618 7187.376836274919 7747.185849142136 7680.588597546439 0.46933089993924726 0.7284694236477656 0.7497790130799037 0.7849545175891885 0.8708809948541824 1.0752980959535927 0.9729708662179007 1.0724669553464927 0.935784640069242 1.008670852598064 1.0 12.907001159960444 -5.2975258333471 0.5840002522692896 0.98527543808645 0.19777597608545536 0.8691373735235072 0.06318337835940419 0.9073832147573854 0.21169351758980576 0.011683966890486272 0.47636154105552275 5.040506355250502e-06 5.2975258333471 -0.7874994620009946 down TLT(ph)EPSVDFNHSDDFTPISTVQK ddPTM_A549_PD325901_60min_R1 1 TLTEPSVDFNHSDDFTPISTVQK 23 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 T(0.102)LT(0.864)EPS(0.034)VDFNHSDDFTPISTVQK 222.63 1.6358e-87 101100000.0 5430.2 6309.4 7670.9 7062.4 8028.3 7530.1 8195.1 9031.7 8309.4 7822.4 8214.9 True False 5981.469906498042 6841.115280841224 8191.4934028689595 7498.628408125864 7464.41990413144 7468.777362196699 8506.969015030787 8851.555658268413 7960.184814716874 7328.4923290208635 7204.519378541652 0.8302385755687729 0.9495588701193849 1.136993735802414 1.0408228521752891 1.036074651470005 1.0366794743369179 1.1807823073345356 1.2286115413378422 1.104887695690838 1.0172076642403738 1.0 12.814686474489951 -5.520359302960411 3.7116555639787494 1.073062754514199 0.844208922456886 0.5576695916077952 0.07003838722617041 0.143227794378331 4.128986160386127 0.01089753451540395 0.06300660986615154 3.017454270155384e-06 5.520359302960411 -0.22885383205731313 TLT(ph)PPLR ddPTM_A549_MK2206_60min_R1 2 TLTPPLR 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.056)LT(0.944)PPLR;T(0.028)LT(0.972)PPLR 58.23 0.035235 17827200.0 2849.1000000000004 3108.0 2755.24 2892.2 3630.1 3235.0 2644.24 2755.97 3920.8999999999996 3974.2 3858.0 True False 3329.958426192737 3266.183924658673 3145.9744622333806 3600.7891298357918 3096.1170987643904 3577.3255527807933 3124.6641804030423 3146.6371873041503 3032.8224103906928 3076.4254597982294 2899.9521246167697 1.1482804829520394 1.1262889124730984 1.0848366893812507 1.2416719225361825 1.067644211255227 1.233580900323842 1.0774881950218294 1.0850652190404626 1.04581809632167 1.060853878822148 1.0 11.501813367609849 -8.584086731336914 1.0146789314162883 1.0147323264643626 1.1460181472300803 0.42460224567436355 0.05457847249488972 0.2506418140193632 0.5070342173827844 0.010335836841646797 0.01178546573912553 2.605633136725895e-09 8.584086731336914 0.1312858207657177 TLT(ph)PPLR ddPTM_A549_PD325901_60min_R1 2 TLTPPLR 7 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.191)LT(0.809)PPLR;T(0.12)LT(0.88)PPLR 91.853 0.013087999999999999 26921000.0 5665.7 6047.799999999999 6244.0 5505.5 7365.7 5957.6 6119.700000000001 6292.700000000001 6782.799999999999 6582.6 7706.9 True False 6240.877693132102 6557.469330755949 6667.755388222216 5845.562231102307 6848.358642285529 5909.083280835983 6352.588532328336 6167.187161972347 6497.74250382237 6166.9735126064525 6759.000158064336 0.9233433269987353 0.9701833373878628 0.9865002562940832 0.8648560577599362 1.0132206660943153 0.874254052766326 0.9398710436112212 0.9124407482982699 0.9613467009717033 0.9124091386872478 1.0 12.7225941326951 -9.583916144829017 1.0296765041337659 0.9926609968955912 0.9373714476200556 0.0 0.04880556451123297 0.45423180020833803 1.0033411325811687 0.011350113036220648 0.007893060244746957 2.606656804265778e-10 9.583916144829017 -0.05528954927553553 TLT(ph)PPLRR ddPTM_A549_MK2206_60min_R1 2 TLTPPLRR 8 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.016)LT(0.984)PPLRR;T(0.015)LT(0.985)PPLRR 94.69200000000001 0.0015614000000000001 281130000.0 7978.3 8531.9 7986.1 7319.1 11395.599999999999 8518.3 7343.9 7692.200000000001 11327.900000000001 11689.3 11768.8 True False 9324.841989292585 8966.13726730866 9118.649066085718 9112.279828566889 9719.322335660034 9419.70085201009 8678.191569018658 8782.592906374515 8762.14873693916 9048.679011428563 8846.28215764382 1.0540972832564757 1.0135486419638196 1.0307888561079361 1.030068865788237 1.0986900669070163 1.064820303506914 0.9809987308080694 0.9928004499365564 0.9904894034346436 1.0228793124815556 1.0 13.11085554328364 -7.764021986809702 24.99985870954464 0.9941592542461484 1.0476881145395367 0.5527497450556966 0.022852865383257315 36.94660393990907 357648.0619018745 0.003470604258557391 0.004916947872264372 1.7217814050127178e-08 7.764021986809702 0.053528860293388325 TLT(ph)PPLRR ddPTM_A549_PD325901_60min_R1 3 TLTPPLRR 8 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.095)LT(0.905)PPLRR;T(0.034)LT(0.966)PPLRR;T(0.092)LT(0.908)PPLRR 88.681 0.0016545000000000002 409775200.0 11657.86 12420.330000000002 13294.83 12848.64 14348.199999999999 13309.35 13382.3 13803.4 14958.439999999999 13795.810000000001 15594.0 True False 12841.357365137064 13467.034798251922 14197.097112107367 13642.271311421366 13340.431930602832 13200.963066300925 13891.57074957555 13528.080358442181 14329.78878617631 12924.740202192332 13676.036858510577 0.9389677359012021 0.9847176442692465 1.0381002375898494 0.9975310429886566 0.975460366816802 0.9652623199889949 1.0157599671085156 0.9891813321652227 1.047802732211774 0.9450647388500775 1.0 13.73936259566963 -8.341661232484805 2.0269849072471344 1.0219790214930458 0.9875222644634192 0.0 0.035487693963459216 0.3850715930986148 3.0882533160878003 0.0051925673172983 0.006493044973467058 4.553431079632718e-09 8.341661232484805 -0.034456757029626583 TLT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 TLTPPR 6 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 T(0.006)LT(0.994)PPR;T(0.008)LT(0.992)PPR 82.671 0.044025 15891600.0 3090.8999999999996 3150.0 3011.9 2865.3999999999996 4406.1 3556.7 3007.9 3960.3 5461.7 4373.9 4950.1 True False 3612.5683547503195 3310.3215452621666 3439.0327096008778 3567.4231286326944 3757.9685267253744 3933.0676332536186 3554.3964951117546 4521.6846529100885 4224.633670542693 3385.83295219452 3720.853554190119 0.9708977529314858 0.8896672489392534 0.9242590872000651 0.9587647233832559 1.0099748544237812 1.0570337090597186 0.9552637434787202 1.2152277930471462 1.1353936963698177 0.9099613577593436 1.0 11.861417894475048 -6.969252666168172 1.1604750631220397 1.0718895426588924 0.9221255235078543 0.2668959543558249 0.08102592444817468 0.3558671467973783 0.9432976220867747 0.012030768977311082 0.030748550738870267 1.0733647627561879e-07 6.969252666168172 -0.1497640191510381 TLT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 TLTPPR 6 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 T(0.027)LT(0.973)PPR;T(0.002)LT(0.998)PPR 83.75299999999999 0.043352 21225000.0 5206.299999999999 5288.9 4910.3 4796.6 6515.6 5721.9 5217.0 5589.2 5154.7 5807.9 5738.700000000001 True False 5734.839743324508 5734.614164396164 5243.542486032603 5092.875088131019 6057.966733599742 5675.302743489901 5415.535789851939 5477.719021357424 4938.065884952113 5441.188202817586 5032.876280616561 1.139475604717617 1.1394307836420001 1.0418580139208655 1.0119213754062533 1.2036788499910434 1.1276459875136526 1.0760319721565854 1.08838737849649 0.9811617869428666 1.0811289408749392 1.0 12.297167418253952 -8.705838975065664 4.81005181586598 0.9909957476776894 1.1038850643674258 0.2646896693856138 0.05603452270255666 0.12030040493611406 5.742538786137128 0.008602781666914248 0.009652466527779065 1.9686160652996523e-09 8.705838975065664 0.11288931668973645 TLT(ph)SPGDLDIYSGDK ddPTM_A549_PD325901_60min_R1 1 TLTSPGDLDIYSGDK 15 0 H7BZ08;Q96M89-2;Q96M89 H7BZ08 CCDC138 Coiled-coil domain-containing protein 138 1 T(0.004)LT(0.892)S(0.104)PGDLDIYSGDK 79.61399999999999 0.0004663 5018300.0 3681.9 3034.3 3642.2 3938.9 4756.7 4202.9 3799.3 4287.6 5671.2 3971.2 4828.8 True False 4055.683777528476 3290.011109876777 3889.3815943278305 4182.196907109049 4422.60580172415 4168.672975867052 3943.8844405567315 4202.080454442868 5432.859186129243 3720.45775427077 4234.888212285232 0.9576837862598376 0.7768826341938835 0.918414229458265 0.9875578049443364 1.0443264568104438 0.9843643484552691 0.9312841904812715 0.9922529813780705 1.2828813687144676 0.8785256110132681 1.0 12.048108172115596 -8.543165409761617 23.110253288924206 1.1337926541613088 0.9441650932187973 0.04424497712588438 0.11592144265623545 81.12821845389091 92419.2496006545 0.019945876947269035 0.022618525575618637 2.8630872980114663e-09 8.543165409761617 -0.18962756094251154 TLTAQKAS(ph)EASK ddPTM_A549_PD325901_60min_R1 1 TLTAQKASEASK 12 1 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 T(0.001)LT(0.011)AQKAS(0.987)EAS(0.002)K 53.981 0.006013 12042000.0 2948.9 2419.1 2460.9 3123.3 3844.4 3416.8 3315.6 3354.9 3454.8 3744.5 4467.1 True False 3248.2701571345588 2622.966046832189 2627.9114725938584 3316.219147471042 3574.3826064600084 3388.974713636428 3441.7769723659358 3287.9838876318654 3309.6067703906247 3508.0716309596323 3917.675019280018 0.8291321105372131 0.6695210894022118 0.6707834263079867 0.8464763236233132 0.9123734329339295 0.8650474316931083 0.8785253895302572 0.8392691766036592 0.8447884916699541 0.8954473287588663 1.0 11.935782012150534 -14.999999999999998 0.028723993915659406 2.1842327391910032 3.597446290572527e-14 0.44150601185156535 0.06904456220188881 595.1430559291308 1.3229423120636785 76.18962371109706 32.87391943162792 1.000000000000004e-15 14.999999999999998 -2.1842327391909673 TLTDEVNS(ph)PDS(ph)DRR ddPTM_A549_MK2206_60min_R1 1 TLTDEVNSPDSDRR 14 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 TLT(0.001)DEVNS(0.999)PDS(1)DRR 48.053000000000004 0.0075513 2901400.0 164.47 395.15 272.36 253.01 348.14 275.11 272.83 299.43 439.85 486.27 431.9 True False 192.228515094563 415.2614471778875 310.98474344662657 314.9974613580507 296.9290671782694 304.22195759676197 322.3996794312777 341.8751194659163 340.2246772961173 376.4212692708178 324.64731016640303 0.5921149169418138 1.27911562539988 0.9579156632692459 0.9702759009356765 0.9146204446482978 0.9370844854399941 0.9930766999610339 1.0530662314456969 1.0479824309085755 1.1594775545125484 1.0 8.342729445880405 -7.992160386177605 5.599475890946729 1.0255450517469116 0.9582460645448525 0.09927063854542317 0.15355407959871767 0.4441561411524475 47.58270360264858 0.021100505036642913 0.02867182346279533 1.0182152888319013e-08 7.992160386177605 -0.06729898720205907 TLTDEVNS(ph)PDS(ph)DRR ddPTM_A549_PD325901_60min_R1 2 TLTDEVNSPDSDRR 14 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 T(0.002)LT(0.004)DEVNS(0.995)PDS(0.999)DRR;T(0.001)LT(0.002)DEVNS(0.997)PDS(1)DRR 57.595 0.002133 5498400.0 343.22 192.29 291.59 221.39 188.53 238.99 321.11 280.6 124.63 336.97 427.01 True False 378.0634417347905 208.49495314181365 311.37905087311265 235.06475748682948 175.28830319319158 237.04374467688197 333.3300167681343 275.0032128735585 119.39223451249958 315.6936566923401 374.49047703941284 1.0095408692995993 0.5567430039612752 0.8314738824195572 0.6276922162218035 0.4680714569271772 0.6329766955647702 0.8900894340580345 0.7343396687884698 0.3188124714315079 0.8429951522081435 1.0 8.548785222470249 -11.17632176240589 1.595768114938622 0.9993751890768315 0.6217820918727577 0.13906202068534967 0.19504997519244485 0.38942950373822827 1.7860320069922817 0.15215247279044236 0.03233418472226353 6.663129248311271e-12 11.17632176240589 -0.37759309720407386 TLTDEVNS(ph)PDSDR ddPTM_A549_MK2206_60min_R1 2 TLTDEVNSPDSDR 13 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(1)PDSDR;TLTDEVNS(0.999)PDS(0.001)DR 334.53 2.2141999999999993e-178 32381000.0 4832.8 5869.200000000001 5356.5 5475.8 7294.200000000001 5785.2 6149.599999999999 6314.799999999999 8096.1 7029.4 7249.299999999999 True False 5648.45848938411 6167.917210619909 6116.132245086858 6817.371245818 6221.232842568314 6397.386024095043 7266.902718288254 7209.942238263923 6262.346276815039 5441.453657869676 5449.098739498276 1.0365858207781697 1.1319151121104145 1.1224117120054242 1.2511006997178595 1.1416994148909718 1.1740264454602414 1.3335971810555505 1.3231439881979046 1.149244412001909 0.9985970007162499 1.0 12.411801917931797 -10.035797814735744 1.0145932904090855 1.018047330575054 1.1875949319044596 0.40758938970240366 0.0849238127007142 0.37245687574712244 0.7725540695181101 0.03323985442410557 0.017284830296520365 9.208781856868136e-11 10.035797814735744 0.16954760132940572 TLTDEVNS(ph)PDSDR ddPTM_A549_PD325901_60min_R1 2 TLTDEVNSPDSDR 13 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.981)PDS(0.019)DR;TLTDEVNS(1)PDSDR 211.82 2.0385e-37 36429000.0 3392.6000000000004 3488.2000000000003 3378.0 3419.1000000000004 3474.6 3771.3 3788.7 3882.2 3971.5 3074.3 3486.4 True False 3737.0142544998835 3782.162855838964 3607.251393564166 3630.2900416605044 3230.556082719266 3740.5877831705284 3932.88105175619 3804.7664754730163 3804.5916662632753 2880.1881733366786 3057.594902110509 1.2222071183858936 1.2369731690840802 1.1797675980798685 1.1873024903183518 1.0565677227187193 1.2233758568175865 1.286266224816608 1.244365783330804 1.2443086112019452 0.9419783409988762 1.0 11.578181562704819 -10.74435406428039 0.961182886299346 0.9981142833340797 1.2087675467057644 0.692895222227199 0.05991602529948268 0.29814377549646814 0.4824062481059303 0.0435351041294813 0.010776292030406597 1.801548405994176e-11 10.74435406428039 0.21065326337168466 TLTDEVNS(ph)PDSDRR ddPTM_A549_MK2206_60min_R1 9 TLTDEVNSPDSDRR 14 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.539)PDS(0.46)DRR;TLTDEVNS(0.593)PDS(0.407)DRR;TLTDEVNS(0.999)PDS(0.001)DRR;TLTDEVNS(0.989)PDS(0.011)DRR;TLTDEVNS(1)PDSDRR;TLTDEVNS(1)PDSDRR;TLTDEVNS(0.951)PDS(0.049)DRR;TLTDEVNS(1)PDSDRR;TLTDEVNS(0.971)PDS(0.029)DRR 196.18 2.6018e-31 1818396000.0 16571.45 19536.539999999997 16586.02 16141.329999999998 22849.760000000002 16505.42 17451.92 17091.47 23857.600000000002 24830.02 26579.99 True False 19368.305626945934 20530.86643869082 18938.16703811359 20095.95657461183 19488.59057289404 18252.012588988928 20622.707962688506 19514.238212931657 18453.891692758556 19220.901236802158 19979.444912595263 0.9694115983540633 1.0275994417516543 0.9478825423310313 1.0058315765290915 0.9754320331796715 0.9135395236873001 1.0321962423334254 0.9767157345112059 0.923643863655342 0.9620337962785487 1.0 14.286228880949523 -6.995245222340634 24.874737602452303 0.9658165519320415 0.988057570183071 0.060036881949035226 0.03575227417625103 303.14527511662055 1585891.8872196777 0.005696839830879535 0.010742960172340875 1.0110084318971121e-07 6.995245222340634 0.022241018251029532 TLTDEVNS(ph)PDSDRR ddPTM_A549_PD325901_60min_R1 10 TLTDEVNSPDSDRR 14 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.996)PDS(0.004)DRR;TLTDEVNS(1)PDSDRR;TLTDEVNS(0.5)PDS(0.5)DRR;TLTDEVNS(1)PDSDRR;TLTDEVNS(0.758)PDS(0.242)DRR;TLTDEVNS(0.996)PDS(0.004)DRR;TLTDEVNS(0.774)PDS(0.226)DRR;TLTDEVNS(0.999)PDS(0.001)DRR;TLTDEVNS(0.5)PDS(0.5)DRR;TLT(0.002)DEVNS(0.968)PDS(0.03)DRR 212.95 9.8661e-39 2513083900.0 30471.36 29213.05 30105.160000000003 30923.23 34927.3 35543.9 30345.82 33364.32000000001 35741.229999999996 32614.719999999998 37373.810000000005 True False 33564.79003537039 31674.93624670788 32148.27719463358 32833.28768534916 32474.126940643713 35254.44226294247 31500.646785969868 32698.842463797308 34239.15039657535 30555.421013137067 32777.06830210155 1.0240327086610834 0.9663749043924406 0.9808161272487066 1.0017152047501456 0.9907575211222166 1.0755825364857932 0.9610574837149226 0.9976133973428237 1.0446068599240785 0.9322194630560647 1.0 15.000399199967093 -7.099358158866095 24.17941408300823 1.018613884719225 0.9910992110443416 0.0 0.03977190079274938 46.70997020963721 11357.41844923094 0.004529772891425894 0.007845802481213379 7.955030354205104e-08 7.099358158866095 -0.02751467367488336 TLTDEVNS(ph)PDSDRRDK ddPTM_A549_MK2206_60min_R1 1 TLTDEVNSPDSDRRDK 16 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.992)PDS(0.008)DRRDK 85.166 1.7207e-05 34726000.0 1726.8 2090.4 2362.7 1440.7 2409.9 1574.0 1544.3 1390.9 3028.0 3770.8 2930.4 True False 2018.241623793346 2196.7924311796937 2697.7663876536385 1793.6715646754817 2055.406902375226 1740.5596352633606 1824.8793202570182 1588.0643344526031 2342.162834722392 2918.973661065663 2202.7008050743875 0.9162577228572756 0.9973176684363657 1.2247538936921267 0.8143055836468482 0.9331303178535011 0.7901933986012141 0.8284735339693082 0.7209623434985636 1.0633141048147456 1.3251793681380555 1.0 11.105057830381943 TLTDEVNS(ph)PDSDRRDK ddPTM_A549_PD325901_60min_R1 2 TLTDEVNSPDSDRRDK 16 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.996)PDS(0.004)DRRDK;TLTDEVNS(0.998)PDS(0.002)DRRDK 169.39 1.3128e-28 147756000.0 8272.400000000001 8604.0 8791.7 9048.0 10378.5 10929.4 11017.0 11787.4 10924.9 9884.7 10599.4 True False 9112.207958180985 9329.089275740631 9388.357630786884 9606.874410501068 9649.549963881283 10840.394590031017 11436.257963733728 11552.291059963592 10465.764445363136 9260.578355066547 9295.740995132557 0.9802562230329273 1.0035874795377298 1.0099633408141238 1.0334705340361168 1.038061405640926 1.1661678822277075 1.2302685681240462 1.2427509615438523 1.1258666147048662 0.9962173386624669 1.0 13.182354156519477 -7.039536432831552 6.769942951227246 1.0972825502278993 1.0100703991786064 0.31955916888247726 0.07721102412055339 0.31337051647577896 41.99802537593994 0.013841305802837904 0.02442466268316245 9.129848420607471e-08 7.039536432831552 -0.08721215104929292 TLTDEVNSPDS(ph)DRR ddPTM_A549_MK2206_60min_R1 1 TLTDEVNSPDSDRR 14 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.091)PDS(0.909)DRR 93.494 4.6101000000000005e-05 124140000.0 2522.9 2612.7 2192.2 1591.4 2271.5 1655.1 2003.0 1733.2 3068.2 2743.0 3691.4 True False 2948.7038410170435 2745.6752702560193 2503.0869238643527 1981.2930714406602 1937.3653590378547 1830.2415834335375 2366.919172748045 1978.8864077023873 2373.257598908599 2123.3543949037626 2774.723502542857 1.0627018650019522 0.9895311254399881 0.9021031903072263 0.7140506322972114 0.6982192486070712 0.6596122394740369 0.8530288407399564 0.7131832796633121 0.855313185884525 0.7652490033539715 1.0 11.438128300670929 -5.6968077482384185 2.893670780012483 0.8601040907028552 1.047788939647977 0.2754686658114509 0.1124342038181974 0.34611220008788546 5.593813304657293 0.01946531587478952 0.09715313693345044 2.009982386741698e-06 5.6968077482384185 0.18768484894512172 TLTEPS(ph)VDFNHSDDFTPISTVQK ddPTM_A549_MK2206_60min_R1 2 TLTEPSVDFNHSDDFTPISTVQK 23 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 T(0.035)LT(0.272)EPS(0.693)VDFNHSDDFTPISTVQK;T(0.046)LT(0.33)EPS(0.623)VDFNHSDDFTPISTVQK 211.94 7.033799999999999e-74 26220000.0 2831.3 3685.1000000000004 4277.2 4165.8 6302.3 4969.799999999999 4521.299999999999 5938.3 7657.7 6841.9 8517.9 True False 3309.1542213609555 3872.655849665275 4883.771275774384 5186.421187009868 5375.240018606326 5495.700937313752 5342.761685344852 6780.072210281035 5923.243176834097 5296.310038094079 6402.670347919439 0.5168396999286824 0.6048501077247718 0.7627710018463429 0.8100403277353184 0.8395309654436638 0.8583451339329988 0.8344583423822519 1.0589444469031946 0.9251207472767775 0.8272032996068781 1.0 12.644458016995452 -4.80919153711614 0.35991000237131016 0.9795923362838656 3.8302646240743475e-17 0.7973915682771081 0.0670661309575023 1.7068130394082244 0.1178135791121916 0.013789516795102732 0.7731566896685433 1.551702510879462e-05 4.80919153711614 -0.9795923362838656 down TLTEPS(ph)VDFNHSDDFTPISTVQK ddPTM_A549_PD325901_60min_R1 1 TLTEPSVDFNHSDDFTPISTVQK 23 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 T(0.063)LT(0.403)EPS(0.534)VDFNHSDDFTPISTVQK 193.57 2.906699999999999e-51 95722000.0 6349.7 5839.7 6800.3 7172.1 8256.6 8249.6 7396.1 9372.0 8157.4 8535.9 8199.5 True False 6994.3168695979175 6331.832013428932 7261.809251525877 7615.104327979088 7676.684899723683 8182.41799274616 7677.562632801214 9185.06810780823 7814.572846122636 7996.941817254194 7191.013480913014 0.9726468860283485 0.8805201144783565 1.0098450337773355 1.0589751150087163 1.0675386605935002 1.137867146886126 1.0676607203114887 1.2772981349830594 1.0867136971533602 1.1120743742840062 1.0 12.811979398977176 -6.009600905150703 3.244160453075408 1.070149578582048 0.9268591833151589 0.4228627232909351 0.07343103456197948 0.2137418904387462 4.634046380519321 0.01138572342293408 0.0377398862207025 9.781356657036975e-07 6.009600905150703 -0.14329039526688914 TLTGDVKT(ph)SPPR ddPTM_A549_PD325901_60min_R1 2 TLTGDVKTSPPR 12 1 H3BSX7;H3BNB8;H3BVH0;H3BRV2;H3BM79;Q9H8T0;Q9H8T0-2 H3BSX7 AKTIP AKT-interacting protein 1 T(0.001)LT(0.004)GDVKT(0.497)S(0.497)PPR;T(0.003)LT(0.011)GDVKT(0.565)S(0.421)PPR 67.234 0.0019293 133927000.0 7872.299999999999 8363.9 8542.7 8747.5 10117.8 9558.8 8253.4 10009.5 10204.6 9747.1 10475.6 True False 8671.490100719044 9068.755206109603 9122.458993428243 9287.81320798609 9407.160632515106 9480.95630201004 8567.48765343377 9809.852670199154 9775.736149452412 9131.666442549502 9187.167610299695 0.9438698049872817 0.9871111087537643 0.9929566304201408 1.0109550192132732 1.023945685062802 1.0319781573791011 0.9325494011700403 1.067777696708327 1.0640641995573124 0.993958838011405 1.0 13.165404434053887 -2.6012137335011265 0.4445249194018629 1.028181450728786 2.0457067848417475e-10 0.24219519312863047 0.03535746859748735 38.9060092980936 0.7198302357575542 0.007570365843274979 34.322038142545196 0.0025048762009347676 2.6012137335011265 -1.0281814505242155 TLTGDVKTS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 TLTGDVKTSPPR 12 1 H3BSX7;H3BNB8;H3BVH0;H3BRV2;H3BM79;Q9H8T0;Q9H8T0-2 H3BSX7 AKTIP AKT-interacting protein 1 TLTGDVKT(0.061)S(0.938)PPR;TLTGDVKT(0.143)S(0.857)PPR 100.4 6.7937e-05 144463000.0 7602.4 8653.0 8626.5 7890.7 10081.9 7749.6 7465.2 7324.2 11741.4 12744.7 11977.9 True False 8885.499259165237 9093.400740048737 9849.86741570835 9823.921854226983 8598.865865412172 8569.657528231852 8821.530208886032 8362.427779421785 9081.991647162968 9865.663418421436 9003.456856777404 0.9868986324376761 1.0099899277246636 1.0940095090580464 1.0911277757533728 0.9550627056028292 0.9518185808577505 0.9797936891590228 0.9288018938111443 1.0087227374590513 1.0957639465995777 1.0 13.136263311948523 -6.767669218835866 24.99890435515427 0.9896895022115301 1.046434069896562 0.23191317114097 0.049810925594473136 144.26823798808962 578918.2380786076 0.006034162459629604 0.011611047403827747 1.707382324673719e-07 6.767669218835866 0.05674456768503189 TLTGDVKTS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 TLTGDVKTSPPR 12 1 H3BSX7;H3BNB8;H3BVH0;H3BRV2;H3BM79;Q9H8T0;Q9H8T0-2 H3BSX7 AKTIP AKT-interacting protein 1 TLTGDVKT(0.047)S(0.953)PPR 87.863 7.7878e-05 90677000.0 6600.0 6968.6 7298.2 7590.6 8006.3 7791.4 7073.9 8551.9 8116.1 8613.6 7977.9 True False 7270.0271413367955 7555.868378303824 7793.499739641799 8059.4541224966215 7443.9651082355595 7727.949421630434 7343.10113548661 8381.325645664234 7775.0085414980185 8069.735825993823 6996.6688760748775 1.0390697730739649 1.079923676843009 1.1138871765522143 1.151898748568185 1.063929884361144 1.1045183870364612 1.0495138851856143 1.1979022866616131 1.111244319148027 1.1533682626582915 1.0 12.772452501032696 -10.62029136178073 0.9634297621472567 1.001631485397216 1.1022797725305846 0.0 0.062155743709548295 0.4004270253002213 0.6788657991890785 0.026566283194407295 0.007708621630254154 2.3972241170149563e-11 10.62029136178073 0.10064828713336871 TLTGKT(ph)ITLEVEPSDTIENVK ddPTM_A549_MK2206_60min_R1 2 TLTGKTITLEVEPSDTIENVK 21 1 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 1 T(0.005)LT(0.035)GKT(0.955)IT(0.005)LEVEPSDTIENVK;T(0.025)LT(0.151)GKT(0.795)IT(0.029)LEVEPSDTIENVK 164.96 1.7998999999999998e-28 11870100.0 3455.6 3022.8999999999996 3524.5 3700.8 4573.6 3767.2 2830.8 3406.5 5411.5 4571.700000000001 5270.700000000001 True False 4038.820798691384 3176.752698150159 4024.3270975093124 4607.496166135224 3900.8294986112833 4165.842603535028 3345.119717531288 3889.3818069687213 4185.803890389767 3538.9497948164562 3961.839726080254 1.0194306377676952 0.8018377616938986 1.0157723117918458 1.1629688439450745 0.9846005311453291 1.051491956151545 0.8443349425547981 0.9817110423133596 1.0565303444344776 0.8932592026678993 1.0 11.951954802681964 -5.9421124963321645 24.98933293847331 1.019547415516383 0.9101760951879808 0.08517492598334697 0.09357289191989214 88.10820073610604 38033.974511992266 0.011228236798171183 0.034910005882259794 1.14258233063655e-06 5.9421124963321645 -0.10937132032840224 TLTGKTIT(ph)LEVEPSDTIENVK ddPTM_A549_PD325901_60min_R1 1 TLTGKTITLEVEPSDTIENVK 21 1 P62979;J3QTR3;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;F5H2Z3;F5GYU3;F5H6Q2;J3QS39;P0CG47;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987 P62979;P62987 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 1 T(0.003)LT(0.015)GKT(0.251)IT(0.73)LEVEPSDTIENVK 161.22 4.5037e-28 9288200.0 2335.0 2091.3 1752.6 2208.7 2493.7 2737.2 2213.7 2666.7 2431.0 2302.1 2791.3 True False 2572.047481063853 2267.5411904179878 1871.5419752399512 2345.126382678352 2318.551114797973 2714.9091507157664 2297.9435648831204 2613.5105765143203 2328.833524030221 2156.7450131211563 2447.987795508567 1.0506782287815746 0.9262877840234118 0.7645225922587331 0.9579812395229504 0.9471252753187424 1.109037044913758 0.9387071165547722 1.0676158522152133 0.951325626828302 0.8810276820326608 1.0 11.257380650126002 -6.7346370430757965 3.1743844958593885 0.9896599759922339 0.9101011120143477 0.11023001400247245 0.08522378146083916 0.33160470238454987 6.884860097435022 0.01105068758947253 0.0236307968578099 1.8423110498264407e-07 6.7346370430757965 -0.07955886397788614 TLTLVDTGIGMTK ddPTM_A549_MK2206_60min_R1 4 TLTLVDTGIGMTK 13 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;; 174.84 1.8577000000000002e-21 8199100.0 11030.8 11959.900000000001 11919.900000000001 11077.1 15734.0 11390.4 11899.3 11932.8 17125.699999999997 16152.2 16295.099999999999 False True 12892.529362832767 12568.607825136824 13610.321058193 13790.98999726991 13419.549442703767 12595.724567664409 14061.248782965962 13624.31094266735 13246.756294123259 12503.406801809906 12248.576948118905 1.0525736514079505 1.026128004777491 1.1111756994989712 1.1259258978152464 1.095600697088709 1.0283418735920027 1.1479904026831003 1.1123178635669775 1.0814934951408908 1.0208048538838739 1.0 13.580326524765157 -10.38514826804192 0.8273651230129848 1.0017410127648638 1.0875384345662527 0.3788476566153618 0.037326029574818675 0.45632870800385006 0.5830696726056396 0.022532449969022178 0.007378655212529354 4.1195685310673284e-11 10.38514826804192 0.08579742180138883 TLTLVDTGIGMTK ddPTM_A549_PD325901_60min_R1 4 TLTLVDTGIGMTK 13 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;; 218.75 1.4800000000000002e-37 17803300.0 19945.3 19810.7 22817.1 21535.1 27136.8 24288.9 24016.4 27089.3 26010.8 24699.200000000004 24910.100000000002 False True 21970.13217304619 21480.217214657685 24365.605616368524 22865.27421723934 25230.804784877746 24091.099251359134 24930.35724427835 26548.98266035525 24917.65653099355 23139.688296808166 21846.315618134195 1.0056676172346983 0.9832420985819403 1.1153187586534326 1.0466421256982723 1.1549226526753167 1.1027534194993314 1.1411698741358545 1.2152613339668803 1.1405885077623752 1.0592032405501075 1.0 14.41510236922288 -5.7570954154086165 24.96075415988239 1.0919924517769932 0.9944548222010072 0.3406250833362163 0.05755723844773552 123.36643775508263 708844.8075259018 0.01004766583059935 0.03636891112562423 1.7494622858654163e-06 5.7570954154086165 -0.097537629575986 TLTRT(ph)SQETADVK ddPTM_A549_MK2206_60min_R1 1 TLTRTSQETADVK 13 1 H3BVG0;Q8N1F7;H3BNN5;H3BV11;H3BRI8;H3BM93 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 T(0.003)LT(0.042)RT(0.612)S(0.343)QETADVK 119.47 4.7783e-06 50702000.0 6898.8 7039.6 6625.3 6745.6 9241.8 8116.9 7270.8 7807.1 10763.0 10766.0 10368.0 True False 8063.148780533657 7397.885571437312 7564.867163889468 8398.272302821491 7882.343462538429 8975.82497043784 8591.810245240384 8913.780333241008 8325.197684979223 8333.953122688268 7793.339457757041 1.0346205018065862 0.9492574539498447 0.9706836465797516 1.0776217754075033 1.0114205220064936 1.1517302716108202 1.102455538067008 1.1437690327178993 1.0682452278776078 1.0693686792243 1.0 12.92802594244537 -6.255773113006752 24.372291974966494 1.0553353731089985 0.9812942205386959 0.3364063157484607 0.05149248037018589 379.29354404000446 1631442.3906470404 0.008316597486434754 0.02133889930518866 5.549155398881472e-07 6.255773113006752 -0.07404115257030264 TLTRT(ph)SQETADVK ddPTM_A549_PD325901_60min_R1 1 TLTRTSQETADVK 13 1 H3BVG0;Q8N1F7;H3BNN5;H3BV11;H3BRI8;H3BM93 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 T(0.211)LT(0.179)RT(0.364)S(0.246)QETADVK 85.42 8.9366e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TLTRTS(ph)QETADVK ddPTM_A549_MK2206_60min_R1 3 TLTRTSQETADVK 13 1 H3BVG0;Q8N1F7;H3BNN5;H3BV11;H3BRI8;H3BM93 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 TLTRT(0.04)S(0.96)QETADVK;T(0.002)LT(0.014)RT(0.106)S(0.851)QET(0.027)ADVK;T(0.009)LT(0.009)RT(0.073)S(0.898)QET(0.01)ADVK 151.44 1.5202999999999998e-13 48542800.0 11009.800000000001 11173.5 12253.4 10483.5 16377.900000000001 12388.5 11654.5 12679.6 18395.4 19618.8 18167.0 True False 12867.98507623348 11742.183424122793 13991.116372994922 13051.957970622198 13968.732605672934 13699.44284717924 13771.97179170848 14476.972129646434 14228.871271417518 15186.899454151637 13655.632516307123 0.9423206915437231 0.8598783989024785 1.024567434447813 0.9557930000705542 1.0229282743946073 1.0032082242122289 1.0085195083612881 1.0601465814460438 1.0419781913745738 1.112134457046638 1.0 13.737208519504389 -5.982458721466488 1.0858356541458762 1.0213854279624324 0.8952114256006404 0.4858280872172357 0.04534619332051836 0.37461918060132965 0.6668465229442428 0.005202035881764542 0.040240748372046026 1.041217067828731e-06 5.982458721466488 -0.126174002361792 TLTRTS(ph)QETADVK ddPTM_A549_PD325901_60min_R1 5 TLTRTSQETADVK 13 1 H3BVG0;Q8N1F7;H3BNN5;H3BV11;H3BRI8;H3BM93 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 TLTRT(0.02)S(0.979)QETADVK;TLTRT(0.01)S(0.989)QETADVK;T(0.003)LT(0.025)RT(0.241)S(0.732)QETADVK;T(0.004)LT(0.003)RT(0.035)S(0.958)QETADVK;TLT(0.001)RT(0.061)S(0.937)QETADVK 127.97 1.4864e-08 164341200.0 32064.4 31844.0 32076.199999999997 36359.1 38226.700000000004 38709.600000000006 36693.8 39143.399999999994 40083.7 39483.5 39144.5 True False 35319.554283436315 34527.60563652772 34253.08382185996 38604.919029492645 35541.7884669558 38394.36185172697 38090.2026386178 38362.65417959676 38399.12148382154 36990.505071703716 34329.974657430284 1.0288255274255453 1.0057568052720558 0.9977602419944204 1.1245251246096422 1.0352990009930936 1.1183917912801897 1.109531918351523 1.1174681764961236 1.1185304349040799 1.0774987584704667 1.0 15.067181171839866 -6.234179847543501 24.65877487698389 1.0719622662870243 1.0102784418114878 0.3823633653598637 0.04004994535030444 781.7613909352035 707174.6298613441 0.007432096211688893 0.019658068610537028 5.832035413495205e-07 6.234179847543501 -0.06168382447553644 TLVDIAK ddPTM_A549_PD325901_60min_R1 2 TLVDIAK 7 0 Q99832-3;Q99832;F8WAM2 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 ; 100.45 0.031091000000000004 5452000.0 4451.799999999999 4991.9 5372.5 5040.1 6679.1 6033.0 5642.3 5912.6 5975.9 5685.3 5557.1 False True 4903.743458758053 5412.584932074572 5737.1101574669865 5351.415530102394 6209.983057644117 5983.869248234774 5857.020814085026 5794.668554655031 5724.753704752036 5326.3291877406355 4873.611929359315 1.0061825869263865 1.1105900532351394 1.177178290069802 1.0980389098821604 1.2742054861270995 1.2278099559357847 1.2017823534125727 1.1889885035259256 1.1746429111980226 1.0928915278736269 1.0 12.25077566295385 -10.594373986561063 0.8632667498089491 0.9991777618529956 1.166130849429022 0.24081240704459805 0.07283265394046877 0.4635255274718728 0.6125114670965319 0.048676228480864725 0.013112750660218934 2.544638029709397e-11 10.594373986561063 0.16695308757602634 TLVITST(ph)PASPNRELHPQLLS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 TLVITSTPASPNRELHPQLLSPTK 24 1 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 2 T(0.045)LVIT(0.267)S(0.291)T(0.317)PAS(0.079)PNRELHPQLLS(0.847)PT(0.153)K 64.914 0.0014334 2773100.0 571.96 826.23 1025.4 789.35 762.48 965.41 743.23 796.51 706.32 749.31 958.81 True False 630.0249581453025 895.8593017544371 1094.9898102311115 838.1063567560817 708.9260352132003 957.5480210406653 771.514024361062 780.6229831999933 676.6358266939637 701.9984387219555 840.8824483973665 0.7492426073894917 1.065379951100003 1.3021913019091396 0.996698597233685 0.843073888109258 1.138741833493672 0.9175052063834684 0.9283378249692078 0.8046735045826684 0.834835404235028 1.0 9.715760322041524 -7.9583768725661965 24.56416992261287 0.90749947063915 1.0228990952896493 0.1431823214440816 0.14333164821553798 204.6763197538747 120790.50472801538 0.023238879200335977 0.032109106272958314 1.100583829123345e-08 7.9583768725661965 0.11539962465049924 TLVITSTPAS(ph)PNRELHPQLLS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 TLVITSTPASPNRELHPQLLSPTK 24 1 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 2 T(0.03)LVIT(0.198)S(0.217)T(0.238)PAS(0.317)PNRELHPQLLS(0.835)PT(0.165)K 73.548 0.00010585 2013800.0 644.53 671.55 842.84 847.11 868.51 678.0 657.06 882.07 626.92 866.39 760.28 True False 709.9622111220918 728.14387530493 900.0401908086508 899.4340607736033 807.5088537968427 672.4785927901836 682.0647778570277 864.476421879471 600.5727325730261 811.6859875409576 666.7703798120062 1.0647776695213476 1.0920459236809947 1.3498502903839462 1.3489412367525921 1.2110748741186093 1.0085609876368336 1.0229380286048904 1.2965129346675648 0.9007189742627074 1.217339600133122 1.0 9.381046206145419 -8.175328029486892 0.8255864274085782 0.9570915534233787 1.2069413924028325 0.0 0.15048489430953718 0.45150935485830723 0.6146833202121471 0.02923873081886772 0.04131855635276997 6.67839297441214e-09 8.175328029486892 0.2498498389794538 TLVLDFETEGERNS(ph)PNPR ddPTM_A549_MK2206_60min_R1 2 TLVLDFETEGERNSPNPR 18 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 TLVLDFETEGERNS(1)PNPR;TLVLDFETEGERNS(1)PNPR 121.21 7.6993e-11 5433300.0 2224.13 2228.42 2221.2599999999998 1970.77 3727.4 3167.2 2648.3 2331.96 3226.5 3060.1000000000004 2913.8 True False 2599.5087692422367 2341.8370596486097 2536.2680688362966 2453.608738471228 3179.104397656924 3502.3510017827907 3129.461829849549 2662.522471327985 2495.7029016617557 2368.8212846682504 2190.22304321108 1.1868694274310547 1.0692230943818621 1.1579953359991506 1.1202551932217821 1.4514980140999922 1.5990841721069666 1.4288324833170658 1.2156398772174672 1.1394743149094133 1.0815434035409142 1.0 11.096862080036223 -9.070528787328504 1.4702940333945518 1.0451810871224165 1.2843020296473695 0.27530090511247785 0.1523966342523104 0.36046401029622765 1.592788143235098 0.03689443534368139 0.03504134059269494 8.501023420536027e-10 9.070528787328504 0.23912094252495297 TLVLDFETEGERNS(ph)PNPR ddPTM_A549_PD325901_60min_R1 2 TLVLDFETEGERNSPNPR 18 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 TLVLDFET(0.001)EGERNS(0.999)PNPR;TLVLDFETEGERNS(1)PNPR 174.63 4.8537e-31 9756500.0 3414.5 3401.0 4117.1 3333.0 3907.7 3897.9 3942.2 3900.0 3188.6 3686.3 4117.6 True False 3761.1375263779546 3687.6142058105374 4396.511164133517 3538.8718402077893 3633.2366328331527 3866.1567947446265 4092.222578254614 3822.2114405091847 3054.594230655191 3453.546388892108 3611.1613036169792 1.0415312998094983 1.0211712786457314 1.217478477001269 0.9799816576078216 1.006113083122059 1.0706131545196391 1.1332151167425832 1.0584438409552117 0.8458758758839368 0.9563533995097361 1.0 11.818247148795447 -8.681700070318863 8.873783922958541 0.9272938434166557 1.0675142892952119 0.4128878341751906 0.069986095121338 0.2157601955039165 21.863042526599383 0.013482067160651943 0.01528111604497054 2.081133450013071e-09 8.681700070318863 0.1402204458785562 TLVLLMGK ddPTM_A549_MK2206_60min_R1 2 TLVLLMGK 8 0 P07737;K7EJ44;CON__P02584 P07737 PFN1 Profilin-1 0 ; 94.662 0.0015349 10644500.0 3261.7 3430.3999999999996 3462.2 2671.3999999999996 4590.700000000001 3578.1000000000004 3618.7 3851.8 4939.7 3853.1 3294.0 False True 3812.1952190912375 3604.992707576933 3953.1920207112303 3325.8931199237018 3915.414111263519 3956.732167049449 4276.170948788495 4397.804445642775 3820.865837079984 2982.6820339058304 2476.008890224894 1.5396532840174812 1.4559692098882142 1.596598476006346 1.3432476486874056 1.5813408936944022 1.5980282553388012 1.7270418396599914 1.7761666620039178 1.5431551365443352 1.2046330066427653 1.0 11.2738007792871 -10.422040667914525 0.8299823132564108 1.008506278776933 1.5723033887751012 0.6688790642939435 0.12498230096036245 0.23229772727211162 0.2958711681431523 0.07643600823341754 0.024140025291475315 3.7840714850788645e-11 10.422040667914525 0.5637971099981682 TLVLLMGK ddPTM_A549_PD325901_60min_R1 2 TLVLLMGK 8 0 P07737;K7EJ44;CON__P02584 P07737 PFN1 Profilin-1 0 ; 104.21 0.0012621 20156800.0 5363.8 5328.7 5957.5 6198.6 8011.6 6561.8 6114.5 6243.0 6606.4 6176.1 6345.5 False True 5908.329027379142 5777.768250074275 6361.811775357765 6581.473443957998 7448.892854519568 6508.36287635786 6347.190643482785 6118.478467461245 6328.75598237485 5786.1399919801825 5565.043727438689 1.0616860022586831 1.0382251304849122 1.1431737263789281 1.1826454141784652 1.3385147034501237 1.1695079491052507 1.140546409759134 1.099448408157841 1.137233828221447 1.0397294748020343 1.0 12.442177308278037 -10.433512646141335 0.5953016009269317 0.9889015099566557 1.1526605135906374 0.29798451037936413 0.07436288257662024 0.9256061915895196 0.5410874943150065 0.07797891640544084 0.017994468802656444 3.6854231018032305e-11 10.433512646141335 0.16375900363398166 TLVS(ph)PNKAETK ddPTM_A549_MK2206_60min_R1 3 TLVSPNKAETK 11 1 H7C1E7;G3XAF7;O75363;H0Y542;O75363-2 H7C1E7 BCAS1 Breast carcinoma-amplified sequence 1 1 T(0.001)LVS(0.994)PNKAET(0.005)K;T(0.002)LVS(0.998)PNKAETK;TLVS(0.996)PNKAET(0.004)K 93.823 8.0689e-05 40683200.0 6132.1 7043.7 6124.0 6425.599999999999 9379.4 7068.0 6672.099999999999 6535.7 9584.400000000001 9513.2 9590.6 True False 7167.048564548973 7402.1942439248 6992.4752858978645 7999.872288456148 7999.702684816047 7815.931068641311 7884.334204938709 7462.155489741806 7413.548703141767 7364.161512795661 7208.989332905542 0.9941821569682272 1.0268005544324181 0.9699661024577473 1.1097078826210227 1.1096843559334013 1.0841923475965451 1.0936809365149904 1.035118120605434 1.028375596188291 1.0215248175194036 1.0 12.815581299106167 -9.088079749143162 1.3361715656059168 1.0088334113988215 1.0556348343608855 0.1284134771554284 0.043359875540480396 0.523907253420136 1.9191223524767798 0.010170472845760965 0.009499168701638763 8.164324367672265e-10 9.088079749143162 0.04680142296206391 TLVS(ph)PNKAETK ddPTM_A549_PD325901_60min_R1 2 TLVSPNKAETK 11 1 H7C1E7;G3XAF7;O75363;H0Y542;O75363-2 H7C1E7 BCAS1 Breast carcinoma-amplified sequence 1 1 T(0.086)LVS(0.913)PNKAETK;T(0.121)LVS(0.879)PNKAETK 128.76 3.0427e-08 101478000.0 10200.7 10611.5 11613.400000000001 10437.8 13033.599999999999 11358.599999999999 11376.4 12037.5 11385.1 11961.9 13196.7 True False 11236.267554641554 11505.768346062485 12401.555161047394 11082.519200036262 12118.164899479034 11266.099327531832 11809.33512740494 11797.402619263932 10906.623839751734 11206.623592569375 11573.589560773793 0.9708541585684428 0.9941400017379938 1.071539222634939 0.9575697446190844 1.0470532790061056 0.973431731648396 1.0203692696542614 1.0193382577907122 0.9423717492727929 0.9682928130224895 1.0 13.498548766757494 -8.740610059151031 24.959890936220383 0.9727866537143901 1.0075663435380695 0.18394036311586492 0.034155997715517104 307.9266815331515 368989.9194127665 0.005908046697648217 0.00669567271930554 1.8171464954567866e-09 8.740610059151031 0.034779689823679405 TLVSVTK ddPTM_A549_MK2206_60min_R1 2 TLVSVTK 7 0 P07900;P07900-2;Q58FG1 P07900 HSP90AA1;HSP90AA4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A4 0 ; 150.84 0.0080992 31071000.0 12878.7 13517.6 12148.4 11385.1 16417.2 12721.5 11187.9 11416.8 17490.1 17799.8 16861.1 False True 15052.309706015369 14205.588101662177 13871.225794121756 14174.450011096553 14002.251627733329 14067.680686151736 13220.59661147671 13035.166362483624 13528.620275950483 13778.812817502005 12674.023527313588 1.1876504468826632 1.1208428066310543 1.0944611049701853 1.1183859632696294 1.1047992452875992 1.10996169889023 1.0431254591712893 1.0284947265871602 1.0674290012792833 1.08716957861152 1.0 13.629586978330755 -2.000000000370307 0.10526225471507225 0.9612925758930683 1.5508427231353408 0.5651147488737683 0.03234217725604735 32.06977176637349 0.22969605056282513 0.1322769434185297 2.7510068772195817 0.00999999999147337 2.000000000370307 0.5895501472422725 TLVSVTK ddPTM_A549_PD325901_60min_R1 2 TLVSVTK 7 0 P07900;P07900-2;Q58FG1 P07900 HSP90AA1;HSP90AA4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A4 0 ; 138.55 0.015194999999999998 55566000.0 20852.0 20623.0 20584.4 20662.2 24565.0 23211.0 21988.0 23374.0 24231.0 22845.0 24074.0 False True 22968.879689568923 22360.97258642479 21981.381168052747 21938.457166739096 22839.639144649398 23021.97731158252 22824.765372295282 22907.787233451738 23212.655335572308 21402.5628012479 21113.05061765961 1.0878996174222706 1.0591066630476118 1.041127668668915 1.0390946132809955 1.0817782592509686 1.0904145368896252 1.0810737768612149 1.0850060300755853 1.0994458240987934 1.01371247522829 1.0 14.365847427822217 -10.889091285638655 1.1306990481198156 0.9998663299328128 1.0747063985287464 0.6451552027086203 0.019099213381085178 0.2613323454062363 0.5915646699791662 0.015329231994533583 0.003649700523686994 1.290947896946052e-11 10.889091285638655 0.07484006859593362 TLVVHEK ddPTM_A549_MK2206_60min_R1 2 TLVVHEK 7 0 P00441;H7BYH4 P00441 SOD1 Superoxide dismutase [Cu-Zn] 0 ; 76.899 0.018779 9213100.0 3275.4 3835.1000000000004 3349.5 3120.7 5152.3 4082.1 4237.3 4804.799999999999 4825.299999999999 5207.9 5177.5 False True 3828.2074441583986 4030.290208963473 3824.50946605403 3885.2716400935465 4394.40349521054 4514.065112521324 5007.162561500397 5485.895114082871 3732.3772544207236 4031.431772956365 3891.7838582693944 0.9836639401296898 1.0355894252451292 0.9827137388237999 0.9983266752694884 1.1291489083786508 1.1598961496614684 1.2865983168261022 1.4096094012071754 0.9590402217456249 1.0358827519134297 1.0 11.92621587266862 -4.1127509207631885 16.24707809351635 1.0473712687377101 1.0373602321144253 0.0 0.14420858541616552 0.0 0.0 0.021183451765259192 0.0 7.713457291652895e-05 4.1127509207631885 -0.010011036623284841 TLVVHEK ddPTM_A549_PD325901_60min_R1 4 TLVVHEK 7 0 P00441;H7BYH4 P00441 SOD1 Superoxide dismutase [Cu-Zn] 0 ;;; 69.19800000000001 0.02386 15382000.0 7188.4 6964.400000000001 6653.4 6739.3 8734.0 8112.799999999999 7406.5 7196.4 8748.9 9125.5 8911.3 False True 7918.161076179613 7551.3144295639295 7104.939734144411 7155.5712549392 8120.553970664273 8046.732046590266 7688.358410492313 7052.862156533415 8381.214158119294 8549.314372632427 7815.266593384982 1.0131658314614274 0.9662260831838458 0.9091103482200072 0.9155888886753828 1.039062951165056 1.0296170898893202 0.9837615030304805 0.9024467780156236 1.0724156441717987 1.0939248547028146 1.0 12.932079371757077 -7.755347269812869 0.6596486391179953 1.0287014882995364 0.958843393283801 0.18650306709282738 0.05602501743871395 0.9156648371102045 0.8079138542798331 0.012993278132567707 0.025383681513143467 1.756518507925996e-08 7.755347269812869 -0.06985809501573548 TLYGFGG ddPTM_A549_PD325901_60min_R1 1 TLYGFGG 7 0 P62805 P62805 HIST1H4A Histone H4 0 103.7 0.0023404 23196000.0 7968.3 8286.7 7756.1 8086.1 8959.9 10218.0 9768.7 9717.3 10280.0 9893.1 8789.1 False True 8777.235950047574 8985.049291176176 8282.475587218181 8585.560032134477 8330.587533976961 10134.787995767105 10140.453224137747 9523.480828425621 9847.967349662971 9268.447977632988 7708.09641869536 1.138703445478329 1.1656638426815304 1.0745163445451607 1.1138366161729505 1.0807580862340798 1.314823718497605 1.3155586896322293 1.2355165674014137 1.2776134099435406 1.2024302076908537 1.0 12.912158902728471 -4.9829641243220735 16.427934923299542 1.156643090307786 1.1045387246512333 0.0 0.10098638285653783 2723504.6052247076 57667234.4103234 0.01745712831818154 3442683.499204656 1.040006073855701e-05 4.9829641243220735 -0.05210436565655274 TLYRQS(ph)LPPLAK ddPTM_A549_MK2206_60min_R1 1 TLYRQSLPPLAK 12 1 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;F5GYP8 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 T(0.166)LY(0.005)RQS(0.83)LPPLAK 64.675 0.0017621 6895300.0 1185.6 1174.7 1645.8 1474.9 1859.8 1301.8 1428.5 1096.0 2067.5 1930.7 1933.8 True False 1385.7002948629781 1234.4872124506248 1879.199187709128 1836.2505662107762 1586.2258836621618 1439.5556119350965 1688.039959196496 1251.3613563592305 1599.2145511190697 1494.5535290706148 1453.5840898351246 0.9532990244961705 0.8492712744198024 1.292803905085587 1.2632571992577715 1.0912515448914155 0.9903490427570522 1.1612950162298248 0.8608799209553597 1.100187159657522 1.028185118096702 1.0 10.505398818454085 TLYRQS(ph)LPPLAK ddPTM_A549_PD325901_60min_R1 2 TLYRQSLPPLAK 12 1 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;F5GYP8 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 T(0.003)LYRQS(0.997)LPPLAK;T(0.001)LYRQS(0.999)LPPLAK 98.694 6.983199999999999e-05 20622000.0 6578.700000000001 6489.700000000001 6342.299999999999 6526.700000000001 8695.4 7837.4 7062.700000000001 7935.3 7843.7 8172.1 6819.299999999999 True False 7246.5647810170285 7036.609794604132 6772.72661734814 6929.839435788836 8084.665101501498 7773.574812881683 7331.474913357734 7777.024216377577 7514.056566201506 7656.112211340687 5980.569331104347 1.2116847711017018 1.176578583916321 1.1324551631102848 1.1587257085621314 1.351821984481303 1.2998051493947396 1.225882438186522 1.3003819178100733 1.2564115806034795 1.2801644437966815 1.0 12.546067115584409 -10.652892808705866 0.8919799576325922 0.9979639051631992 1.2348944373640824 0.0 0.1026276576700653 0.3190476141823036 0.44633298928463055 0.04917194774510675 0.012724693633651361 2.2238587092237027e-11 10.652892808705866 0.23693053220088323 TMDASER ddPTM_A549_PD325901_60min_R1 1 TMDASER 7 0 P00352;Q5SYQ7;Q5SYQ9;Q5SYQ8 P00352 ALDH1A1 Retinal dehydrogenase 1 0 49.933 0.032414 47747000.0 1688.2 1521.6 1595.6 1525.8 1730.3 1985.3 1817.0 1838.0 1660.5 1747.4 1899.5 False True 1859.5848212128462 1649.8305720556632 1703.8870111222573 1620.0452006567787 1608.7696972109447 1969.132375024116 1886.1469293005516 1801.3396481168945 1590.7149595442957 1637.0688657868507 1665.8735419225898 1.1162821033022072 0.9903696352314886 1.0228189404795973 0.9724899038777455 0.9657213808403841 1.1820419290359425 1.1322269559091165 1.0813183610791746 0.9548833807087461 0.9827089659503833 1.0 10.702063173141298 -8.762495464611762 24.99999191843152 0.9786949279872424 1.05518254751755 0.2205038456820414 0.0657625805432754 34.10538165535034 807352.5987808448 0.012118457377713089 0.013260441355523265 1.7278440244915525e-09 8.762495464611762 0.07648761953030758 TMELS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TMELSPR 7 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TMELS(1)PR;TMELS(1)PR 76.221 0.017778 17372900.0 2697.3999999999996 2889.0 2512.7 1981.42 3389.4 2637.8 2320.3 2613.8999999999996 4030.0 3720.8999999999996 3830.3999999999996 True False 3152.65517490165 3036.0377600833 2869.0386431867346 2466.8679889493237 2890.8237499110287 2916.9302451700696 2741.8684755503214 2984.4283297330194 3117.2114345875925 2880.346105722719 2879.2059663380182 1.094973826728841 1.0544705017907252 0.9964687058619098 0.8567876066493653 1.0040350651217171 1.013102320317859 0.9523002201324372 1.036545618696682 1.0826635784421796 1.0003959909079208 1.0 11.491455281616885 -8.43938876147109 12.957849705988341 1.0401165129901215 0.9939165831480035 0.058675474256204785 0.06021924154751718 2.296646827913384 353.1639664259803 0.010615760293151512 0.012833374738828415 3.635894210251435e-09 8.43938876147109 -0.04619992984211807 TMELS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TMELSPR 7 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TMELS(1)PR;TMELS(1)PR 88.37 0.012792 25186000.0 4492.3 4152.7 4431.4 4332.4 5303.3 4463.0 4738.9 4576.1 5461.1 5467.4 5314.4 True False 4948.354988943528 4502.66260290192 4732.141452172955 4600.002508405711 4930.814503391782 4426.654807702933 4919.241432725581 4484.826095618996 5231.588958486814 5122.187430927678 4660.7624907572535 1.0617050319033845 0.9660785358256592 1.0153148678048394 0.9869635102685375 1.0579415950008326 0.9497705185538677 1.0554585097354598 0.962251585338846 1.1224749102451723 1.0990020283345214 1.0 12.186350280667625 -8.74688260783975 24.997200104708842 1.0578353827765254 1.0065993423239379 0.26790809286869866 0.047268565611599936 317.3679133286918 544991.0883578374 0.008975875679381514 0.01015710144776332 1.7910899299565912e-09 8.74688260783975 -0.05123604045258756 TMFAQVES(ph)DDEEAKNEPEWK ddPTM_A549_MK2206_60min_R1 4 TMFAQVESDDEEAKNEPEWK 20 1 Q9NW82 Q9NW82 WDR70 WD repeat-containing protein 70 1 T(0.002)MFAQVES(0.998)DDEEAKNEPEWK;T(0.006)MFAQVES(0.994)DDEEAKNEPEWK;T(0.004)MFAQVES(0.996)DDEEAKNEPEWK;T(0.028)MFAQVES(0.972)DDEEAKNEPEWK 101.47 4.0542000000000003e-10 48554100.0 9729.3 9839.2 7730.1 7670.3 14796.5 9983.7 10854.500000000002 10891.6 14518.5 14393.800000000001 14958.2 True False 11371.367981452742 10339.97325337889 8826.344416642567 9549.52384433285 12619.954450805024 11040.16850735629 12826.622147076227 12435.517654126088 11230.082931280385 11142.230583071747 11243.666114681842 1.0113576715519992 0.9196264944115584 0.7850059159189398 0.8493247439874793 1.1224056568458611 0.9819011339139795 1.1407864673540402 1.106002039484963 0.998791925759542 0.9909784290483651 1.0 13.456824897590169 -6.744775778495692 24.993307727451302 1.0242352014944884 0.8857554696159773 0.4846597331567257 0.07534237790640821 186.12530241824706 279163.01326975046 0.011107628480642916 0.023070599220285974 1.7997998923523808e-07 6.744775778495692 -0.13847973187851115 TMFAQVES(ph)DDEEAKNEPEWK ddPTM_A549_PD325901_60min_R1 4 TMFAQVESDDEEAKNEPEWK 20 1 Q9NW82 Q9NW82 WDR70 WD repeat-containing protein 70 1 TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;T(0.082)MFAQVES(0.918)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK 133.95 1.3626e-17 107550000.0 19273.0 17351.5 15697.099999999999 16758.4 17633.4 18408.8 15920.7 15720.300000000001 20906.999999999996 19201.7 23971.100000000002 True False 21229.58077196728 18813.771800094535 16762.399600330384 17793.528306912165 16394.89081592757 18258.884836218185 16526.570950641322 15406.746284163219 20028.351496050946 17989.301385017377 21022.806665322758 1.0098357041443757 0.8949219816176097 0.7973435644052257 0.846391663595646 0.7798621314903228 0.8685274581503107 0.7861258115407586 0.7328586772182392 0.9526963651855215 0.8557040775478774 1.0 14.359667669774248 -8.92585130860585 8.189736306138137 0.9792700567394559 0.8373248428624357 0.1845158556499189 0.07878840777055986 0.16886206623928768 16.502018878259907 0.012299523427588574 0.013047669215371156 1.186174794759385e-09 8.92585130860585 -0.1419452138770202 TMIIS(ph)PER ddPTM_A549_MK2206_60min_R1 2 TMIISPER 8 0 O75533;B4DGZ4;A0A494C1M2;O75533-2 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.003)MIIS(0.997)PER;TMIIS(1)PER 61.765 0.010679000000000001 19717100.0 4451.8 5457.3 4281.9 4706.4 7240.3 6146.4 5334.3 6185.700000000001 8298.900000000001 7494.6 7197.5 True False 5203.155003939779 5735.053259987051 4889.137806447755 5859.468211278323 6175.261461167413 6796.8079683498845 6303.473261702393 7062.541917911761 6419.212400620095 5801.5646547742435 5410.162109105549 0.9617373562952268 1.0600520177269173 0.9036952512419385 1.0830485469957678 1.141418932858623 1.2563039390096182 1.1651172616608587 1.3054214967099012 1.1865101768052881 1.0723458073483503 1.0 12.401456108011542 -6.468336350656802 5.93591803271633 1.1281620921217412 0.9839282373463741 0.4336529095265603 0.0879542636144238 0.23537359443894723 18.389418184101988 0.01552071702203997 0.03606188953153755 3.401446537893175e-07 6.468336350656802 -0.1442338547753671 TMIIS(ph)PER ddPTM_A549_PD325901_60min_R1 4 TMIISPER 8 0 O75533;B4DGZ4;A0A494C1M2;O75533-2 O75533 SF3B1 Splicing factor 3B subunit 1 1 TMIIS(1)PER;TMIIS(1)PER;TMIIS(1)PER;T(0.002)MIIS(0.998)PER 71.34899999999999 0.0023493000000000003 65714800.0 12424.900000000001 12737.9 12160.7 12656.5 14382.5 12780.4 12273.6 12895.900000000001 12386.5 14004.4 13887.0 True False 13686.266701272056 13811.367536663936 12985.998230229658 13438.263260002968 13372.322816931395 12676.320659728111 12740.67856437162 12638.681157862167 11865.938480214048 13120.159793994142 12178.987036946042 1.1237606756418697 1.1340325344600435 1.066262587425003 1.1033974516301561 1.0979831718652187 1.0408353848537126 1.0461197245486538 1.0377448567373955 0.9742960103510798 1.0772784102810002 1.0 13.572106524489323 -7.700839457410198 0.7470344768559432 0.9874831176899888 1.113628650422964 0.498844303600375 0.0337842190596433 0.16746177813097882 0.18837154783594454 0.004479384587851358 0.008699718646118702 1.9914093532443047e-08 7.700839457410198 0.12614553273297524 TMIIS(ph)PERLDPFADGGK ddPTM_A549_MK2206_60min_R1 1 TMIISPERLDPFADGGK 17 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.011)MIIS(0.989)PERLDPFADGGK 54.857 0.0027296 14359000.0 889.23 1427.0 1125.7 1173.3 1658.6 1380.7 1302.4 1071.5 1640.2 1527.5 1484.2 True False 1039.310284413803 1499.6282047901936 1285.341187024041 1460.7585526714379 1414.6221371341348 1526.8047575655153 1539.0292214613346 1223.3884063311273 1268.6973188611832 1182.4366891051766 1115.6321781638692 0.9315886586601703 1.344195904476611 1.1521191412204355 1.309354983894051 1.2680004797480382 1.368555683001509 1.3795131151508206 1.0965875942594319 1.1372003637876704 1.0598804088380238 1.0 10.123645736374671 -9.164268095801487 0.9273774466072181 1.0335477235195372 1.2500119747320613 0.2836899236684507 0.12617869723026756 0.3894608860139946 0.7050293339383326 0.03199647931904133 0.027106578427208244 6.850651959722976e-10 9.164268095801487 0.2164642512125241 TMIIS(ph)PERLDPFADGGK ddPTM_A549_PD325901_60min_R1 3 TMIISPERLDPFADGGK 17 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.098)MIIS(0.902)PERLDPFADGGK;T(0.065)MIIS(0.935)PERLDPFADGGK;T(0.362)MIIS(0.638)PERLDPFADGGK 77.045 9.358299999999999e-05 49576000.0 4208.0 4183.0 4270.6 4655.6 5665.900000000001 4604.7 4501.5599999999995 4947.4 4888.7 4697.1 5116.5 True False 4635.193062234127 4535.516090239775 4560.428597204005 4943.165838365255 5267.946730293875 4567.200849883417 4672.869329148149 4848.720225839783 4683.244939912197 4400.524304387897 4487.202936165796 1.032980484318096 1.0107668752140864 1.0163187763245625 1.1016140586209073 1.1739934220125121 1.0178280133204711 1.041376865638486 1.0805662892489758 1.0436891325253754 0.980683148720712 1.0 12.131600716810835 -9.950385222506535 0.7259788052117456 1.0025478758269162 1.059859636438868 0.2333475220496133 0.045848656849274215 0.8420142854776438 0.9024580112801518 0.023327429354167626 0.010298265450449214 1.1210236566662548e-10 9.950385222506535 0.057311760611951756 TMIIS(ph)PERLDPFADGGKT(ph)PDPK ddPTM_A549_MK2206_60min_R1 1 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 T(0.424)MIIS(0.576)PERLDPFADGGKT(1)PDPK 51.29600000000001 0.047391 3327300.0 807.05 1007.4 651.51 621.57 971.77 907.58 806.26 1061.0 1315.9 1178.5 1160.6 True False 943.2603095219015 1058.6723570467007 743.9039146824489 773.854677903338 828.8239202959348 1003.6195131971543 952.7470056015169 1211.399999176226 1017.8507510604994 912.2760314962035 872.390989069524 1.0812357318453798 1.2135296791360268 0.8527184760079686 0.8870502877714463 0.9500601572924807 1.1504239793531066 1.092110094600701 1.3885975604450964 1.1667368918449283 1.0457192278765053 1.0 9.768831058226738 -7.263334495003481 24.819399864199458 1.1119868044055061 0.9948378580680608 0.21511163397623434 0.13053312068851206 253.38205432480268 3318428.660426397 0.0216453065963409 0.035692907302874305 5.4533767846926015e-08 7.263334495003481 -0.11714894633744533 TMIIS(ph)PERLDPFADGGKT(ph)PDPK ddPTM_A549_PD325901_60min_R1 1 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 T(0.424)MIIS(0.577)PERLDPFADGGKT(0.999)PDPK 49.101000000000006 0.057596 5088200.0 804.19 937.11 555.54 973.65 1059.4 933.29 933.14 979.18 1054.6 1049.3 1269.4 True False 885.8307767866119 1016.0835484878316 593.2422851334037 1033.7901491804125 984.9913987315931 925.689595671313 968.6511533338012 959.6494867481504 1010.2788294702892 983.0470189253418 1113.2718473895939 0.7957003303943353 0.9127002994554745 0.5328817813227215 0.9286053101984475 0.8847716764249509 0.8315036420276639 0.8700939986986107 0.8620082228777651 0.9074861920196732 0.8830251310409007 1.0 10.120590208871691 -8.860213367289141 0.22271466558795516 1.0462657276324756 0.7470837465251635 0.1793302299887244 0.10303738516456479 1.7669723289728272 0.3410343531516311 0.19557584843735262 0.16389506911602056 1.3797062534326862e-09 8.860213367289141 -0.2991819811073121 TMIIS(ph)PERLDPFADGGKTPDPK ddPTM_A549_MK2206_60min_R1 3 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.11)MIIS(0.89)PERLDPFADGGKTPDPK;T(0.233)MIIS(0.766)PERLDPFADGGKTPDPK;T(0.175)MIIS(0.824)PERLDPFADGGKT(0.001)PDPK 60.521 0.00030773 12966800.0 2477.63 3763.3 3477.3999999999996 3101.12 4518.5 3542.36 3703.85 3281.7999999999997 5818.3 5218.2 5240.9 True False 2895.7933717622786 3954.8358956460675 3970.5476092719173 3860.894539214565 3853.8346356207553 3917.2101839717375 4376.791601589043 3747.005200090987 4500.4643399158795 4039.4049958027076 3939.4398885184087 0.7350774358055665 1.0039081716089973 1.0078964831635515 0.9800617977360777 0.9782696892654329 0.9943571408180487 1.1110187553172994 0.951151764242354 1.142412238103338 1.0253754620233322 1.0 11.943774805841198 -4.660712519541319 1.1655341147351796 1.0475289205367497 1.9190339855203613e-36 0.6343696927449329 0.05945519064502015 2.7696785537700173 1.1458246006035826 0.01020491788842586 4.9775104378691495 2.1841752443348788e-05 4.660712519541319 -1.0475289205367497 TMIIS(ph)PERLDPFADGGKTPDPK ddPTM_A549_PD325901_60min_R1 3 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.314)MIIS(0.685)PERLDPFADGGKT(0.001)PDPK;T(0.482)MIIS(0.518)PERLDPFADGGKTPDPK;T(0.125)MIIS(0.874)PERLDPFADGGKT(0.001)PDPK 55.985 0.0018765000000000001 20689100.0 7429.6 7847.6 8098.4 8316.0 9494.9 9587.699999999999 9589.400000000001 9542.0 9867.2 9830.4 8656.5 True False 8183.847522617556 8508.944793154598 8648.006123635296 8829.660432993694 8828.010979626762 9509.6209499918 9954.329864521034 9351.677324445805 9452.515898112297 9209.706866333443 7591.805378074698 1.0779843680203776 1.1208064971908551 1.1391237911091516 1.1630514736974094 1.1628342060930927 1.2526165353837702 1.3111940268212565 1.2318120471651786 1.2450946023209937 1.213111560121296 1.0 12.890227292868651 -4.158705442621398 16.16399768534373 1.1495795625835559 1.1497858735754827 0.0 0.0881382074318959 0.0 0.0 0.014924405796162983 0.0 6.938962770419051e-05 4.158705442621398 0.0002063109919268058 TMKFRDRPVK ddPTM_A549_MK2206_60min_R1 1 TMKFRDRPVK 10 3 Q6RI45-5;Q6RI45-2;Q6RI45 Q6RI45-5 BRWD3 Bromodomain and WD repeat-containing protein 3 0 41.983999999999995 0.028275 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TMLLLS(ph)RSPEAQPK ddPTM_A549_MK2206_60min_R1 1 TMLLLSRSPEAQPK 14 1 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 T(0.005)MLLLS(0.544)RS(0.451)PEAQPK 64.275 0.0011883 21028000.0 2803.3 3991.0 3480.9 4173.6 4496.1 3436.0 2856.0 2926.7 4462.9 5374.9 5434.6 True False 3276.4285058952287 4194.124853060731 3974.5439619010253 5196.132187360025 3834.729645947656 3799.595239367791 3374.8982313372017 3341.568687642845 3452.0602757868423 4160.70635696983 4085.038832670375 0.802055657266161 1.0267037903086582 0.9729513291561247 1.2719908916908218 0.9387253837782754 0.9301246316143362 0.8261606240670772 0.8180016946028573 0.845049561874114 1.0185230856789655 1.0 11.996134077460143 -6.98113635808703 24.999173840509137 0.9089352747170956 1.0269672476588692 0.16338010186377172 0.11812658961983653 333.17962944193835 441546.4063949464 0.01722906695204927 0.032556572552764146 1.0443922535317294e-07 6.98113635808703 0.11803197294177359 TMLLLSRS(ph)PEAQPK ddPTM_A549_MK2206_60min_R1 7 TMLLLSRSPEAQPK 14 1 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 TMLLLS(0.141)RS(0.859)PEAQPK;TMLLLS(0.113)RS(0.887)PEAQPK;T(0.013)MLLLS(0.064)RS(0.923)PEAQPK;T(0.093)MLLLS(0.137)RS(0.77)PEAQPK;TMLLLS(0.005)RS(0.994)PEAQPK;TMLLLS(0.003)RS(0.997)PEAQPK;TMLLLS(0.007)RS(0.993)PEAQPK 157.11 1.5040999999999997e-19 351351000.0 34021.4 39012.1 41115.8 35793.6 40583.5 30367.2 32575.5 29396.1 44213.299999999996 55183.4 56545.99999999999 True False 39763.38057662897 40997.64925584831 46946.638693651104 44563.03360683576 34613.72091063737 33580.63694788407 38494.04668589816 33563.08719678063 34199.058144131915 42717.431613464214 42504.067609792626 0.9355194176161102 0.9645582543352333 1.1045210807738068 1.048441622480592 0.8143625506247459 0.7900570189227569 0.9056555960547507 0.7896441231202996 0.8046067133643628 1.0050198490561038 1.0 15.375313292321437 -6.75200197772015 24.97847815979156 0.8820660651644866 1.0163000499489554 0.3974723746396518 0.08267817774278056 192.73291054377995 510112.6148232468 0.013720694877988965 0.02826480066325666 1.770100897491577e-07 6.75200197772015 0.1342339847844688 TMLLLSRS(ph)PEAQPK ddPTM_A549_PD325901_60min_R1 9 TMLLLSRSPEAQPK 14 1 P55265-5;P55265;P55265-4 P55265-5 ADAR Double-stranded RNA-specific adenosine deaminase 1 TMLLLS(0.168)RS(0.832)PEAQPK;TMLLLS(0.401)RS(0.599)PEAQPK;TMLLLS(0.086)RS(0.914)PEAQPK;TMLLLS(0.017)RS(0.983)PEAQPK;T(0.035)MLLLS(0.069)RS(0.897)PEAQPK;TMLLLS(0.001)RS(0.999)PEAQPK;TMLLLS(0.001)RS(0.999)PEAQPK;TMLLLS(0.007)RS(0.993)PEAQPK;TMLLLS(0.013)RS(0.987)PEAQPK 156.5 4.7451e-19 920691500.0 71511.7 70129.90000000001 80521.9 84952.4 92881.0 94607.5 90125.9 93816.8 89932.1 84521.70000000001 89783.2 True False 78771.51513986895 76039.99279390542 85986.60035152006 90199.71680710108 86357.35898205503 93837.0478870166 93555.69044328488 91945.55032614437 86152.56658430205 79184.98543743654 78740.4355825977 1.0003947089832725 0.965704497711858 1.0920259675388921 1.1455323575456062 1.096734585516323 1.1917262991081978 1.1881530721930815 1.1677043649281655 1.094133731250815 1.005645763216188 1.0 16.26481707288353 -3.7879864864127364 12.223574448555766 1.0747929630263597 0.6111665088311528 0.0 0.07927151418014597 0.0 0.0 0.01161621485643742 0.0 0.00016293467309045837 3.7879864864127364 -0.463626454195207 TMPLRWS(ph)FGSK ddPTM_A549_PD325901_60min_R1 1 TMPLRWSFGSK 11 1 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 TMPLRWS(0.849)FGS(0.151)K 46.3 0.0099697 1239700.0 1003.6 1161.2 1163.5 1101.5 1230.9 1527.3 980.42 1115.7 1257.6 1482.4 1497.2 True False 1105.484733188729 1259.0583992317543 1242.4621066938746 1169.537153311995 1144.445830374474 1514.862175174701 1017.7304196064096 1093.4464882502814 1204.747445421805 1388.801011012034 1313.0538915327716 0.8419187820983188 0.9588779313254336 0.9462384710223182 0.8907000396965851 0.8715909055633081 1.1536938315657035 0.775086556743211 0.8327506550198521 0.9175156124136407 1.057687746076317 1.0 10.358710414488874 -8.47013882304014 0.01069891293364535 1.866615966885956 5.377984834895993e-07 0.11013696424900021 0.09796852406282336 1707.4218696226576 14.497468819627588 1259.2990258817451 1268.282363564626 3.3873586128274576e-09 8.47013882304014 -1.8666154290874726 TMRPTQKDS(ph)ETVDEDEEVDPALTVGTIK ddPTM_A549_MK2206_60min_R1 2 TMRPTQKDSETVDEDEEVDPALTVGTIK 28 2 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 T(0.061)MRPT(0.067)QKDS(0.435)ET(0.435)VDEDEEVDPALT(0.002)VGTIK;T(0.06)MRPT(0.06)QKDS(0.44)ET(0.44)VDEDEEVDPALTVGTIK 56.163999999999994 0.0016542999999999998 5677400.0 1532.5900000000001 2516.46 2479.06 1849.34 3174.8 2593.52 2296.8 2297.88 3858.3999999999996 3297.5 3766.6 True False 1791.2537237719728 2644.5370653302957 2830.6279853458454 2302.428383020027 2707.7911256321295 2867.964564960756 2714.0988297392473 2623.6115269623624 2984.478560598703 2552.5924597867893 2831.2492671284413 0.6326725606851032 0.9340530683871873 0.9997805626689924 0.813219948434719 0.9563944641223598 1.0129678789708094 0.958622351359401 0.9266621478451903 1.0541207357647011 0.9015781441157683 1.0 11.467223056378028 TMRPTQKDS(ph)ETVDEDEEVDPALTVGTIK ddPTM_A549_PD325901_60min_R1 2 TMRPTQKDSETVDEDEEVDPALTVGTIK 28 2 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 T(0.131)MRPT(0.131)QKDS(0.606)ET(0.131)VDEDEEVDPALTVGTIK;T(0.125)MRPT(0.17)QKDS(0.661)ET(0.044)VDEDEEVDPALTVGTIK 119.99 6.603299999999999e-21 24953000.0 5361.9 5734.3 5498.2 6580.3 8754.2 7095.7 6177.799999999999 7211.6 6668.700000000001 6007.5 6541.0 True False 5906.2361407778435 6217.5495855275985 5871.340915362489 6986.750186054396 8139.3351923504915 7037.914971771836 6412.8995596218765 7067.758980609241 6388.437730028932 5628.185424753636 5736.4984668152965 1.0295890733597248 1.0838579704143745 1.0235060550137394 1.2179468409991916 1.4188681892682813 1.2268660076325342 1.1179118405974393 1.2320684859405207 1.1136475965233839 0.9811186139614202 1.0 12.485954675570335 -9.727926981450105 0.891459329701792 1.0161472275150603 1.1703540514622852 0.2715795661352779 0.10733900511275166 0.5586641712589271 0.9266594841131156 0.03978517390256412 0.023756929341184594 1.8709966872607143e-10 9.727926981450105 0.15420682394722496 TMS(ph)QGEITK ddPTM_A549_MK2206_60min_R1 3 TMSQGEITK 9 0 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 T(0.089)MS(0.911)QGEITK;T(0.03)MS(0.853)QGEIT(0.117)K;T(0.044)MS(0.956)QGEITK 99.215 0.0008124 24345800.0 14490.5 14712.2 12890.0 12072.099999999999 16269.1 12837.9 11686.3 12867.4 18418.9 18556.8 18801.4 True False 16936.142141288776 15460.98813911303 14717.995825477377 15029.765041937155 13875.936941546453 14196.398056891667 13809.549440082623 14691.393354759806 14247.04855893932 14364.805991742676 14132.493487757847 1.1983831555245057 1.0940028490022642 1.0414295140646423 1.06348996763781 0.9818463354372933 1.0045218184030424 0.9771488274199474 1.0395471519223485 1.0081057933110462 1.016438182277322 1.0 13.786728411750165 -4.038958411338394 0.6743704310764461 1.0036816101193373 2.065581916123158 0.8788776923830709 0.021064829094638055 2.6474753257016777 0.2401253285136964 0.003150868501660006 3.1630133824914966 9.142007824549525e-05 4.038958411338394 1.0619003060038208 TMS(ph)QGEITK ddPTM_A549_PD325901_60min_R1 2 TMSQGEITK 9 0 B2RTY4-4;B2RTY4-5;B2RTY4-2;B2RTY4;H3BV44;H3BRD5 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 T(0.088)MS(0.911)QGEIT(0.001)K;T(0.095)MS(0.905)QGEITK 59.198 0.0034778 8401300.0 3964.1 3177.4 4078.5 3762.7 4855.8 4362.2 4224.5 5073.2 4318.4 4340.2 5535.6 True False 4366.532513783817 3445.1706490862703 4355.291536012863 3995.113433288286 4514.745359600591 4326.675689482799 4385.265659235102 4972.011046151589 4136.912665640523 4066.1590312968333 4854.756293059585 0.8994339262768477 0.7096485263351995 0.8971184696210678 0.8229277006138797 0.9299633363789903 0.8912240755871234 0.9032926463279585 1.0241525518509822 0.8521360117612291 0.8375619260455691 1.0 12.245183159375724 -13.655485988476064 0.01831101027346211 2.019967044514647 1.5881871291644342e-06 0.07741174299042697 0.07834067229139338 1864.1912025012189 3.3587785820920346 228.56515078683896 149.5447050290173 2.2106195757629006e-14 13.655485988476064 -2.0199654563275176 TMS(ph)SDDEDCSAK ddPTM_A549_PD325901_60min_R1 1 TMSSDDEDCSAK 12 0 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 T(0.106)MS(0.447)S(0.447)DDEDCSAK 48.659 0.011656 3491200.0 1271.7 1092.8 902.83 855.0 1320.3 1186.0 854.6 994.0 800.28 1134.1 1593.7 True False 1400.8020478239396 1184.8940911819336 964.1014729578256 907.8114081541139 1227.56668278773 1176.3416092170469 887.1222706550635 974.1738902220856 766.6470146486652 1062.4927324532837 1397.6850032966724 1.0022301480805154 0.8477547432985 0.6897845155981728 0.6495107309679147 0.8782856508385724 0.8416357093640195 0.6347082987673461 0.6969910158042295 0.5485120129645812 0.7601803911090252 1.0 10.448823541378975 -11.098915350967639 1.4587812430046516 0.9989168551988703 0.7263687264212213 0.0 0.14357609409430372 0.37990391360945835 1.4544686562538292 0.0990568718178292 0.021990729259812856 7.963145462344455e-12 11.098915350967639 -0.272548128777649 TMSS(ph)DDEDCSAK ddPTM_A549_MK2206_60min_R1 3 TMSSDDEDCSAK 12 0 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 T(0.018)MS(0.118)S(0.864)DDEDCSAK;T(0.007)MS(0.188)S(0.805)DDEDCSAK;T(0.05)MS(0.185)S(0.765)DDEDCSAK 72.705 0.00063153 29425500.0 3914.2000000000003 4160.0 4207.4 3394.2 4808.8 4120.8 3908.7000000000003 3695.5999999999995 4917.2 4851.4 4711.6 True False 4574.821266997864 4371.726231203369 4804.072586199653 4225.779152371426 4101.43189017884 4556.860320834339 4618.8601949676895 4219.462617300338 3803.4620511548687 3755.465370556367 3541.5796864552553 1.291745964235743 1.2344000751763409 1.3564773382264397 1.193190476140601 1.1580797986459928 1.286674513709805 1.304180790462653 1.1914069400831615 1.0739450719409704 1.060392735173831 1.0 11.790177288325053 -8.760572942944389 1.960064995039346 1.0284426172072647 1.2584381040053876 0.7580947418142863 0.05336283338418019 0.10542158843689371 0.79354317418431 0.010453957968925906 0.011278927390436901 1.7355097467966542e-09 8.760572942944389 0.22999548679812287 TMSS(ph)DDEDCSAK ddPTM_A549_PD325901_60min_R1 2 TMSSDDEDCSAK 12 0 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 TMS(0.002)S(0.998)DDEDCSAK;T(0.102)MS(0.027)S(0.871)DDEDCSAK 191.95 2.758e-20 48713000.0 10424.5 11116.599999999999 13228.9 10366.9 10581.4 10445.2 11278.6 11379.400000000001 7293.700000000001 10558.0 11738.3 True False 11482.7875658887 12053.434895711085 14126.692705838066 11007.239868061846 9838.198967848286 10360.137754295025 11707.813294886733 11152.428940033395 6987.17115352498 9891.366078160443 10294.563515214497 1.1154224799252643 1.1708543910479667 1.3722478553811441 1.0692284186497147 0.9556693640588314 1.0063697930450004 1.1372811754071528 1.0833318890646548 0.6787243716742851 0.9608339453675562 1.0 13.32959504120635 -7.537712698884898 0.7059986197991567 0.8619943178551571 1.194678239356005 0.3068055405768829 0.1354012684713968 0.5320067859204188 0.5289159331660036 0.03394496420015831 0.0758301536726904 2.8992609167794035e-08 7.537712698884898 0.3326839215008478 TNATS(ph)PGVNSSTSPQSTDK ddPTM_A549_MK2206_60min_R1 1 TNATSPGVNSSTSPQSTDK 19 0 B7ZM87;O75044 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 T(0.006)NAT(0.125)S(0.592)PGVNS(0.075)S(0.075)T(0.105)S(0.02)PQS(0.001)T(0.002)DK 60.528 0.0028886999999999997 3704500.0 870.71 956.75 755.46 829.84 896.38 1038.2 671.67 830.74 1129.1 1173.8 1095.8 True False 1017.6645611843317 1005.4444883903427 862.5955877668841 1033.1508372529331 764.5236894274055 1148.0616348986148 793.7037447626963 948.4999390345496 873.3606528021967 908.6377647604946 823.6826174585419 1.2355056906801283 1.2206697908626793 1.0472426751318458 1.254306956775052 0.9281775203491969 1.393815543225786 0.9636038541297072 1.1515356994677504 1.0603121084392135 1.1031406339059093 1.0 9.685944732979362 -2.0000002091208215 0.06791702420523617 0.8284794432805167 1.805262672337966 0.1026175113380492 0.12841789573394763 218.9855848890861 1.0703343498656117 2.730528709308731 20.527859128516283 0.009999995184816295 2.0000002091208215 0.9767832290574492 TNATSPGVNSS(ph)TSPQSTDK ddPTM_A549_PD325901_60min_R1 1 TNATSPGVNSSTSPQSTDK 19 0 B7ZM87;O75044 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 TNATS(0.001)PGVNS(0.071)S(0.484)T(0.28)S(0.164)PQSTDK 163.35 6.9103e-27 8638100.0 1182.1 1382.1 1435.4 1862.3 1659.2 2038.2 1468.3 2199.0 1778.5 1601.2 1991.7 True False 1302.1059217839743 1498.5744174803713 1532.814875761398 1977.330041409831 1542.663515929261 2021.601574963056 1524.1769599845898 2155.1392199178736 1703.7558299003485 1500.099958737498 1746.7335264265437 0.7454519547969142 0.8579296125071494 0.8775321779603217 1.132015852157507 0.8831704965812571 1.15736117981249 0.872586995626483 1.2338111035899355 0.9753953903809709 0.8588029805590283 1.0 10.770443818832236 -5.848427410672408 2.1027775740436923 1.0095546194819958 0.7764940967997999 0.3372613793820517 0.11829884664365765 0.24325314868053396 2.0472432099418687 0.013666418689391953 0.06868266907091955 1.417661644008502e-06 5.848427410672408 -0.2330605226821959 TNATSPGVNSST(ph)SPQSTDK ddPTM_A549_MK2206_60min_R1 1 TNATSPGVNSSTSPQSTDK 19 0 B7ZM87;O75044 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 TNATSPGVNS(0.017)S(0.067)T(0.419)S(0.419)PQS(0.067)T(0.011)DK 133.16 1.3076e-16 4088800.0 837.22 857.12 584.74 650.01 1291.7 1134.3 1003.3 970.87 991.43 1195.1 1237.5 True False 978.5222679362195 900.7437469444787 667.6649246694832 809.2624791800579 1101.692641104643 1254.3308731125974 1185.586623074445 1108.4937956646772 766.872687988382 925.1260799670023 930.194596737494 1.0519543667187778 0.9683390444361758 0.7177690851045675 0.869992668220622 1.184367921474335 1.3484607172649234 1.2745576325993475 1.1916794609993853 0.8244217830097735 0.9945511221111489 1.0 9.86138874941508 -4.264180013299662 3.465851749832723 0.9862224295359932 24.82183380584606 0.0 0.19264073355744213 9066.171972600767 290.54337314919536 0.03031818680477827 1708084.5053271696 5.4427700547150216e-05 4.264180013299662 23.83561137631007 TNAVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TNAVSPK 7 0 Q6XZF7 Q6XZF7 DNMBP Dynamin-binding protein 1 T(0.004)NAVS(0.996)PK;T(0.016)NAVS(0.984)PK 103.88 0.010253 202267000.0 19542.3 19924.2 15485.8 12105.3 23081.0 18387.5 16249.900000000001 17715.1 22082.5 26377.0 30109.0 True False 22840.562476636962 20938.256676861092 17681.91929822945 15071.099043427572 19685.81547521581 20333.253045365327 19202.296487887415 20226.269675218424 17080.849008506335 20418.417380377912 22632.10433387412 1.0092107273670896 0.9251573060982317 0.781275971398047 0.6659168242199303 0.8698181655937087 0.8984252080762974 0.8484538690972182 0.8936981456446004 0.7547176681640222 0.902188195987462 1.0 14.466083112227635 -11.019612166884565 1.3029249172618773 1.0001158188876873 0.8374894680430016 0.11554283372146723 0.0918672196535598 0.4637007720009104 1.4004377410266926 0.0663792463352914 0.014952662828285218 9.558457932153354e-12 11.019612166884565 -0.16262635084468569 TNAVS(ph)PK ddPTM_A549_PD325901_60min_R1 4 TNAVSPK 7 0 Q6XZF7 Q6XZF7 DNMBP Dynamin-binding protein 1 T(0.025)NAVS(0.975)PK;T(0.002)NAVS(0.998)PK;T(0.044)NAVS(0.956)PK;T(0.003)NAVS(0.997)PK 103.42 0.010383 401048000.0 45964.7 45763.7 40425.4 40917.8 44405.8 40312.4 33591.9 40549.9 40081.4 44436.2 53873.0 True False 50631.00250657627 49620.36760671914 43168.91074167815 43445.19957493376 41286.889799693556 39984.109179933606 34870.25813669301 39741.100433718835 38396.91814482309 41630.49074847066 47246.96252908433 1.0716244980914653 1.0502340245930897 0.9136864769900115 0.9195342356281575 0.8738527852299104 0.8462789360336159 0.7380423263236773 0.8411355631434501 0.8126854318134563 0.8811252304916685 1.0 15.527933962108849 -5.775023387187798 2.3488672902280516 0.8854647590405341 1.0768106260278614 0.5642425651982091 0.06407144961846511 0.25012355441482953 2.644051058171193 0.012321085682880097 0.06338369716794612 1.6787136152983456e-06 5.775023387187798 0.19134586698732725 TNEGVIEFR ddPTM_A549_PD325901_60min_R1 2 TNEGVIEFR 9 0 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 0 ; 114.84 0.00058904 4094300.0 2229.7 1646.74 1847.5700000000002 1964.3600000000001 2550.7 2269.0699999999997 2089.7 2081.79 2141.4700000000003 2145.7 2409.5 False True 2456.057502581613 1785.5165590345334 1972.9572105409563 2085.6940558147544 2371.5476314372963 2250.5914462277597 2169.224677027717 2040.2670653173377 2051.4714630625244 2010.2201358125474 2113.146775078956 1.1622749217170891 0.8449562425533924 0.933658387485762 0.9870086074531307 1.1222824932966076 1.0650426523939247 1.0265376274900098 0.9655112883680806 0.9708135219267354 0.9512922431701115 1.0 11.045177262216264 -2.3883578132308814 17.028811994073017 0.9961976019417262 1.1843779313162304 0.0 0.08508056325637207 0.0 0.0 0.01034833680118672 0.0 0.0040892361061602555 2.3883578132308814 0.18818032937450413 TNEKVELQELNDR ddPTM_A549_MK2206_60min_R1 2 TNEKVELQELNDR 13 1 P08670;B0YJC4;A0A1B0GTT5;P17661 P08670 VIM;DES Vimentin;Desmin 0 ; 159.34 1.6740999999999998e-18 30656000.0 6845.200000000001 7511.2 6829.0 6114.5 8493.3 7495.799999999999 6935.9 7182.3 10425.7 11192.3 10981.7 False True 8000.502410927847 7893.487997070854 7797.454886903415 7612.552774490336 7243.946821006479 8289.00058069066 8196.063250256204 8200.41301987126 8064.295596421803 8663.951656610065 8254.640810498699 0.9692126640752649 0.9562485125980877 0.9446146799005707 0.9222149030165285 0.8775605126019821 1.0041624791412196 0.9929036815062876 0.9934306298877996 0.9769408241440616 1.0495855429094847 1.0 13.010989724248045 -7.298986105778642 24.996091703470757 0.9904741593565866 0.9351461855210988 0.5676212012068131 0.02883949195721147 310.6244436965253 206792.2493538308 0.0035565917916003265 0.005685714852133648 5.0235866103855223e-08 7.298986105778642 -0.05532797383548771 TNEKVELQELNDR ddPTM_A549_PD325901_60min_R1 2 TNEKVELQELNDR 13 1 P08670;B0YJC4;A0A1B0GTT5;P17661 P08670 VIM;DES Vimentin;Desmin 0 ; 214.53 1.4654e-37 46996000.0 12367.2 12034.3 13033.2 13262.599999999999 15538.4 15059.0 14176.0 15441.8 14903.3 14751.9 14537.0 False True 13622.709039748546 13048.472695379518 13917.711326998366 14081.80068045 14447.036388569924 14936.364496795535 14715.475437404846 15133.801185142238 14276.966128621798 13820.46251642499 12749.041157635518 1.0685281246887952 1.02348659275954 1.0916672991257008 1.1045380202585886 1.1331861125820792 1.1715676741579901 1.1542417390810298 1.1870540692449223 1.1198462654637515 1.0840393677878895 1.0 13.638101127093044 -10.509657183895106 0.948212442878855 1.0037282891802164 1.1172910661669078 0.19334056128648036 0.050075980211000265 0.3991133101755255 0.671690986750236 0.0284128448936934 0.009217149441548986 3.09273576119439e-11 10.509657183895106 0.11356277698669137 TNGHS(ph)PSQPR ddPTM_A549_MK2206_60min_R1 5 TNGHSPSQPR 10 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 T(0.053)NGHS(0.933)PS(0.014)QPR;T(0.018)NGHS(0.79)PS(0.192)QPR;T(0.03)NGHS(0.945)PS(0.025)QPR;T(0.027)NGHS(0.848)PS(0.126)QPR;T(0.005)NGHS(0.959)PS(0.036)QPR 96.734 0.00016297 80106700.0 2617.0 2974.9500000000003 2723.17 2634.81 2531.29 1977.54 2002.32 1932.1100000000001 3517.4399999999996 4581.4 4522.38 True False 3058.685620492927 3126.3622479611695 3109.356454000405 3280.338568281114 2158.9405941795867 2186.8019702151864 2366.1156255501096 2205.992509338715 2720.7454561974637 3546.4585580795106 3399.348234661582 0.8997859028695336 0.919694609714621 0.9146919466195711 0.9649904457663439 0.6351042744505749 0.6433003679697707 0.696049790199169 0.6489457263734353 0.8003726798141128 1.0432760380116144 1.0 11.731042446096042 TNGHS(ph)PSQPR ddPTM_A549_PD325901_60min_R1 6 TNGHSPSQPR 10 0 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 T(0.059)NGHS(0.939)PS(0.003)QPR;TNGHS(0.928)PS(0.072)QPR;T(0.343)NGHS(0.655)PS(0.002)QPR;TNGHS(0.5)PS(0.5)QPR;T(0.289)NGHS(0.706)PS(0.006)QPR;TNGHS(0.999)PS(0.001)QPR 106.49 0.00012989 110993000.0 4076.2200000000003 3969.85 3708.9700000000003 4120.2300000000005 4980.06 4236.120000000001 3631.41 4269.42 4459.59 4732.9 5158.25 True False 4490.034853645435 4304.403191689787 3960.683008048454 4374.7272493787395 4630.277765874321 4201.622443201112 3769.6052947337976 4184.263068804802 4272.168940941975 4434.063886278233 4523.817950840851 0.9925321713732673 0.951497880432991 0.8755177708493496 0.967043169490408 1.023533178432541 0.9287779678269653 0.8332796181670249 0.9249406395823387 0.9443724277516292 0.9801596647924493 1.0 12.14332515768927 -10.234595109909234 0.9329984847835334 0.9958642793081308 0.9369017507471462 0.1385151666149882 0.04937347638017959 0.7047484539687422 1.2056592886845392 0.02324439696166422 0.009740874407445702 5.826461620950871e-11 10.234595109909234 -0.058962528560984606 TNGVSDVPTS(ph)PTLQRPTHMNQMVFHK ddPTM_A549_PD325901_60min_R1 2 TNGVSDVPTSPTLQRPTHMNQMVFHK 26 1 A0A1B0GTR9;O60674 A0A1B0GTR9 JAK2 Tyrosine-protein kinase JAK2 1 T(0.001)NGVS(0.003)DVPT(0.072)S(0.426)PT(0.072)LQRPT(0.426)HMNQMVFHK;T(0.001)NGVS(0.004)DVPT(0.111)S(0.661)PT(0.111)LQRPT(0.111)HMNQMVFHK 42.355 0.015303 6872200.0 2087.3 1724.8600000000001 1679.89 1920.54 2276.5 2462.8 2193.23 2518.4 1927.94 1819.75 2504.0 True False 2299.201159410955 1870.220005596697 1793.8974373992023 2039.1673939371951 2116.6064934986503 2442.7437733387387 2276.694567831506 2468.1685363534184 1846.915386391948 1704.850674439523 2196.0238741638127 1.0469836810341733 0.8516391955478294 0.8168843055416556 0.9285725068511178 0.9638358300201074 1.1123484594487254 1.0367348891862165 1.123926094516268 0.8410270070926273 0.7763352186180965 1.0 11.100678023408893 -4.847926640387582 8.28738851270109 0.9472694263395915 2.86264387928247 0.06431843869863074 0.11140408772644919 18137.393611767442 28862.08394482947 0.015056558611271642 610061.7210115803 1.4192972445197225e-05 4.847926640387582 1.9153744529428787 TNGYDGELYGSQS(ph)LNRR ddPTM_A549_MK2206_60min_R1 2 TNGYDGELYGSQSLNRR 17 1 C9JTC6 C9JTC6 LRRFIP1 1 TNGYDGELYGS(0.068)QS(0.932)LNRR;TNGYDGELYGS(0.023)QS(0.977)LNRR 112.36 1.411e-09 11943200.0 3488.6 3812.6 2627.2 4095.7000000000003 4420.6 3708.5 2966.7200000000003 2962.94 5029.700000000001 4678.2 4731.4 True False 4077.390391918846 4006.6450550687423 2999.776464910329 5099.146683862958 3770.335595933408 4100.931008496933 3505.7346221543085 3382.945818623192 3890.4809807804545 3621.3913708489927 3556.4628000030557 1.1464735106790216 1.1265814603952276 0.8434719083544897 1.4337691607117544 1.060136379306475 1.1530926201430842 0.9857363395313165 0.9512107981616693 1.0939186488263315 1.0182565021756678 1.0 11.79622735793695 -7.754016667089912 24.98454970787314 1.0330133603585765 1.1252060967830029 0.1524514572364889 0.13280030460070286 305.37413337020894 1027873.1199336172 0.019411217282937116 0.028477940895284017 1.761908427662359e-08 7.754016667089912 0.09219273642442638 TNHSS(ph)PEAQSK ddPTM_A549_MK2206_60min_R1 1 TNHSSPEAQSK 11 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;H7C0P6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 T(0.006)NHS(0.082)S(0.912)PEAQSK 80.37100000000001 0.00027067 12456000.0 1523.0 1638.0 1206.9 536.77 1436.2 1148.7 1146.0 1777.6 1286.0 1955.0 2427.1 True False 1780.0451662249618 1721.3672035363265 1378.0565680192904 668.2786740965207 1224.9368825226359 1270.2546715546525 1354.2133659357273 2029.5802436716863 994.7230533200112 1513.3641421935322 1824.3840854477346 0.9756964996699742 0.9435333366843496 0.7553544119417661 0.36630371829433817 0.6714248892507828 0.6962649376778085 0.7422852329932381 1.1124742097131335 0.5452377387275276 0.8295205786242797 1.0 10.833193775040677 -11.114784803930267 1.4580188753989822 1.0002021742273852 0.7279375912140837 0.04895725315952426 0.20227018310141687 0.5723211544291308 2.1736993659767054 0.15053927947944962 0.032491552568097805 7.677418167722755e-12 11.114784803930267 -0.2722645830133015 TNHSS(ph)PEAQSK ddPTM_A549_PD325901_60min_R1 1 TNHSSPEAQSK 11 0 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;H7C0P6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 T(0.007)NHS(0.103)S(0.89)PEAQSK 69.554 0.0010777 16116000.0 2306.2 2759.9 2142.9 1926.3 2423.2 2296.4 1593.4 1724.5 2071.7 2701.5 3155.7 True False 2540.3237262652897 2992.4864588698915 2288.3300803045154 2045.2831760552858 2253.002791586177 2277.6988797689946 1654.0377089419355 1690.1034946559214 1984.6336535308149 2530.926828959127 2767.5689056304877 0.9178899651232247 1.081268998499665 0.826837617538272 0.7390179777978623 0.8140728807158332 0.8229962676394883 0.5976500550995765 0.6106816315277592 0.7171036101371033 0.91449460348036 1.0 11.434403521659467 -5.828024470867216 8.134424190431549 0.8118355152193775 0.9989755629180523 0.3023282598654293 0.12067950389842624 0.2875808097982663 30.976054149008938 0.02098624262020395 0.0659618408099957 1.4858519177385867e-06 5.828024470867216 0.18714004769867487 TNIIPVLEDAR ddPTM_A549_MK2206_60min_R1 2 TNIIPVLEDAR 11 0 A6NHQ2 A6NHQ2 FBLL1 rRNA/tRNA 2-O-methyltransferase fibrillarin-like protein 1 0 ; 73.067 0.0025541 1431700.0 474.94 666.8 812.91 521.82 698.92 641.42 519.11 479.23 822.69 656.54 808.42 False True 555.098260831834 700.7372718669245 928.1928616360595 649.6659234253898 596.1097938537253 709.2946386598628 613.4255675313223 547.162320080323 636.3520285659723 508.22715801316684 607.6670027430504 0.9134908730045938 1.1531599851625127 1.5274695802900824 1.0691150259809294 0.9809810161862417 1.1672423143893915 1.0094765138838826 0.9004311861766311 1.0472051727236065 0.8363579982440954 1.0 9.247137143215287 -6.50381240101379 24.786149234452264 1.0213209547862452 1.2110088218599062 0.23848303204307097 0.15521881368469018 698.9875397583814 908679.4887706588 0.01941527433585942 0.04444786317323365 3.134639479019477e-07 6.50381240101379 0.18968786707366103 TNILQYASTRPPTLS(ph)PIPHIPR ddPTM_A549_MK2206_60min_R1 2 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQYAS(0.072)T(0.072)RPPT(0.349)LS(0.506)PIPHIPR;TNILQYAS(0.01)T(0.01)RPPT(0.388)LS(0.592)PIPHIPR 107.87 1.6562999999999998e-10 38226000.0 623.0 1113.6799999999998 978.6199999999999 648.74 1459.69 826.66 1016.9000000000001 892.04 1519.1 981.3 1199.52 True False 728.1471691123779 1170.3615550881177 1117.4030313986552 807.6813291230452 1244.9715346396506 914.136612507503 1201.6575670331938 1018.4894017579268 1175.0262755042222 759.6236484575517 901.646078932169 0.8075753736707112 1.2980276656603353 1.23929228719323 0.895785328628715 1.3807762976289837 1.0138530337647857 1.3327375287389176 1.1295888991877354 1.3032012260240968 0.842485390007112 1.0 9.81641743659388 -5.246709700226377 24.055781555763023 1.1612474754778381 0.8075749497932961 0.2246918793884809 0.17667638579131023 1475.344387781281 2409391.9930104045 0.020736923732237005 0.6073248684068362 5.66617912519114e-06 5.246709700226377 -0.353672525684542 TNILQYASTRPPTLS(ph)PIPHIPR ddPTM_A549_PD325901_60min_R1 2 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQYAS(0.023)T(0.013)RPPT(0.086)LS(0.879)PIPHIPR;TNILQYASTRPPT(0.009)LS(0.991)PIPHIPR 139.67 3.6155999999999997e-23 77795000.0 1487.7600000000002 1678.8 1722.77 1879.21 2086.62 2138.2 1549.9 1801.98 1721.67 2197.3 1918.54 True False 1638.7962999689744 1820.2783677491116 1839.6875320575905 1995.2845337044337 1940.063009648212 2120.7872081179494 1608.8822926378239 1766.0380952740375 1649.3141971687014 2058.5621030064367 1682.5717426270926 0.9739830156723248 1.0818429441273096 1.0933783597156959 1.1858540608729617 1.15303434646958 1.2604438517472347 0.9562042746098819 1.049606415306027 0.9802340996132122 1.2234617109356 1.0 10.716452305411906 -7.794510056284855 24.99962047887614 0.9934375344596996 1.1254419435768181 0.06165140912302802 0.09824602120121598 127.21665023832193 96168.37874667159 0.010848071273715261 0.014989257162093159 1.6050550918911003e-08 7.794510056284855 0.13200440911711853 TNILQYASTRPPTLS(ph)PIPHIPRS(ph)PYK ddPTM_A549_PD325901_60min_R1 2 TNILQYASTRPPTLSPIPHIPRSPYK 26 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 TNILQYAS(0.079)T(0.082)RPPT(0.099)LS(0.739)PIPHIPRS(0.714)PY(0.286)K;T(0.013)NILQY(0.001)AS(0.085)T(0.092)RPPT(0.128)LS(0.681)PIPHIPRS(0.99)PY(0.01)K 85.531 3.0551e-07 10724600.0 3100.7 3651.2999999999997 4429.62 4389.700000000001 4421.1 4296.1 3444.8 3883.6600000000003 4754.799999999999 4117.47 4779.200000000001 True False 3415.480781385306 3959.0078652384627 4730.240650668947 4660.841799267968 4110.5771879670065 4261.113985967416 3575.8937490668905 3806.197354627667 4554.9722912624 3857.4922415081724 4191.388697844925 0.8148804674549592 0.9445575561326619 1.1285616752989485 1.1120041912754166 0.980719633586007 1.0166353667361705 0.853152500722612 0.908099350600599 1.086745377159703 0.9203375109284349 1.0 12.033212603899702 -5.413708772264181 3.731861569103018 1.024147827780783 0.8187327560879232 0.25065853923315995 0.08495781523117218 0.20709225606465634 4.702512549990253 0.011689206117251279 0.0866687398526802 3.857369371378547e-06 5.413708772264181 -0.20541507169285977 TNKPS(ph)TPTTATR ddPTM_A549_MK2206_60min_R1 2 TNKPSTPTTATR 12 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5;A0A2R8YEA0 A0A2R8Y7K2 SPAST Spastin 1 T(0.01)NKPS(0.491)T(0.491)PT(0.005)T(0.002)AT(0.001)R;T(0.023)NKPS(0.6)T(0.376)PT(0.001)T(0.001)ATR 55.898999999999994 0.014536000000000002 7915500.0 1283.24 1356.02 1201.9 1451.23 1959.35 1836.1299999999999 1595.09 1770.55 2375.0 2631.0 1850.9099999999999 True False 1499.8195397941697 1425.0356259702867 1372.347492834854 1806.7814151481896 1671.132210535249 2030.428057875549 1884.8972058206084 2021.530884581966 1837.0662920956659 2036.6552726911432 1391.2779644827433 1.0780157366696888 1.024263779308899 0.986393465481984 1.2986487684507562 1.2011490537453824 1.459397841200218 1.3547955577096957 1.4530028766275627 1.320416436537655 1.4638737367254586 1.0 10.44219497047918 -6.255503200263912 24.355268174469003 1.2238718480264588 1.0290282626249525 0.30423887242466086 0.15150848729103825 447.6165390738306 1836493.1741059907 0.025078679338728527 0.06445408097259524 5.552605254563195e-07 6.255503200263912 -0.19484358540150626 TNKPS(ph)TPTTATR ddPTM_A549_PD325901_60min_R1 1 TNKPSTPTTATR 12 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5;A0A2R8YEA0 A0A2R8Y7K2 SPAST Spastin 1 T(0.132)NKPS(0.488)T(0.353)PT(0.022)T(0.004)ATR 89.959 0.00022736 5729700.0 1328.7 1349.9 1564.2 1556.6 1779.8 1749.1 1503.6 1520.0 1637.9 1122.5 1436.7 True False 1463.5886458627585 1463.6608104744614 1670.3560182987185 1652.747646704903 1654.7929879766734 1734.8559095122566 1560.8203208014909 1489.6824075830668 1569.064758950679 1051.6251584329518 1259.9950079916732 1.161582892455738 1.161640166184003 1.325684631847174 1.3117096783893174 1.3133329715442883 1.3768752245117797 1.2387511941728309 1.182292309203269 1.2452944249768396 0.8346264483294695 1.0 10.29920230254607 -10.555178907161283 0.5429634151583231 0.9642385755877337 1.269887611458495 0.6900896676940801 0.08434457906471718 0.5856656690482088 0.25915835825766464 0.08962252521853838 0.01673252524902284 2.7849736652773127e-11 10.555178907161283 0.3056490358707612 TNKPST(ph)PTTATR ddPTM_A549_MK2206_60min_R1 1 TNKPSTPTTATR 12 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5;A0A2R8YEA0 A0A2R8Y7K2 SPAST Spastin 1 T(0.002)NKPS(0.053)T(0.898)PT(0.008)T(0.036)AT(0.004)R 64.04 0.0026446 67529000.0 2560.3 2883.4 2293.2 2505.9 3398.3 2298.5 1875.8 2021.5 3774.7 3856.1 3844.8 True False 2992.4160466748313 3030.1527440028362 2618.4102425899705 3119.8456124941254 2898.414571700789 2541.725744379183 2216.608579251514 2308.053815584108 2919.736476957268 2985.0043318222392 2890.0300489182355 1.0354273125273974 1.0484848574972603 0.9060148850597818 1.0795201294401462 1.0029011887906467 0.8794807325033088 0.7669846132157729 0.7986262345085421 1.0102789339682305 1.032862731977321 1.0 11.496868777803249 -5.435062738910158 0.991036895273177 0.965290708542139 1.075346032130106 0.07773054611503238 0.09680681124252538 3.98896073726655 3.6033041159789687 0.016308857703750988 0.43475767820221417 3.672292461124396e-06 5.435062738910158 0.11005532358796699 TNKPST(ph)PTTATR ddPTM_A549_PD325901_60min_R1 1 TNKPSTPTTATR 12 1 A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5;A0A2R8YEA0 A0A2R8Y7K2 SPAST Spastin 1 TNKPS(0.112)T(0.887)PT(0.001)TATR 97.551 0.00097401 6326500.0 988.92 867.34 1085.0 1017.9 828.15 1191.4 946.31 868.92 997.72 789.15 1112.6 True False 1089.3144303955742 940.4337857299946 1158.6346246350272 1080.7733711813705 769.9836009624015 1181.6976334074118 982.322344890701 851.5887089454466 955.7892980647607 739.3229343228181 975.7572533524996 1.1163785118203484 0.9637989187360475 1.187420970383975 1.10762524948501 0.7891138890506809 1.2110569809728227 1.0067282016256043 0.8727464807661581 0.9795359396826074 0.7576914563357411 1.0 9.930378471842525 TNKS(ph)PEAK ddPTM_A549_PD325901_60min_R1 2 TNKSPEAK 8 1 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.016)NKS(0.984)PEAK;T(0.12)NKS(0.88)PEAK 61.435 0.0030210999999999997 43645000.0 14889.4 16003.0 13157.8 13758.1 14827.2 11660.599999999999 9047.5 11454.7 11793.3 16659.4 17819.1 True False 16400.960927003052 17351.62897253339 14050.767432279039 14607.906590087841 13785.788623063117 11565.6399396596 9391.807563481969 11226.227022461686 11297.668613305472 15607.522640889008 15627.46366458162 1.0494960205330377 1.1103291836063873 0.8991073493342342 0.9347586341343078 0.8821513790691121 0.7400842636973898 0.6009809246760713 0.7183652615302519 0.7229368025286612 0.9987239756802118 1.0 13.931796027659608 -6.057923917578059 1.2599264565477382 0.8261208450845692 1.0932985864437033 0.4033823247286886 0.11916583821906608 0.5367774008046208 1.4321323559056314 0.02143329381159812 0.12640812818398994 8.751370737818625e-07 6.057923917578059 0.2671777413591341 TNKS(ph)PEAKPLPGK ddPTM_A549_MK2206_60min_R1 3 TNKSPEAKPLPGK 13 2 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.06)NKS(0.94)PEAKPLPGK;T(0.029)NKS(0.971)PEAKPLPGK;T(0.173)NKS(0.827)PEAKPLPGK 101.67 2.8856e-05 1814680000.0 23529.7 25790.5 28066.3 22680.1 29702.4 25229.9 23923.5 24639.8 31328.1 31320.5 28347.6 True False 27500.93811406665 27103.12628986792 32046.523369790215 28236.72551814839 25333.21630653136 27899.711271747812 28270.09027920015 28132.567106222767 24232.335370695688 24245.177296968035 21308.108566041043 1.290632532157039 1.271963027871111 1.5039590806695577 1.3251633963959408 1.1889002831018598 1.3093471522954354 1.326729221018448 1.3202751909692227 1.1372354001103138 1.1378380780172968 1.0 14.379114916194245 -9.125294781969068 0.7816438099690196 1.0235021996503626 1.328783596686166 0.5737887878141141 0.08300204176768206 0.2086622628228662 0.27299982751238133 0.023019151202631843 0.019062050346341015 7.493853834182641e-10 9.125294781969068 0.3052813970358035 TNKS(ph)PEAKPLPGK ddPTM_A549_PD325901_60min_R1 4 TNKSPEAKPLPGK 13 2 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.189)NKS(0.811)PEAKPLPGK;T(0.024)NKS(0.976)PEAKPLPGK;T(0.048)NKS(0.952)PEAKPLPGK;T(0.052)NKS(0.948)PEAKPLPGK 113.29 8.2103e-06 3775120000.0 60234.100000000006 54950.7 61884.0 56669.4 68596.8 57294.6 62380.8 62044.0 55890.4 61871.2 58802.0 True False 66349.02148999924 59581.58833849841 66083.82037872268 60169.74013245465 63778.79741411295 56828.01177356412 64754.735480083546 60806.48374742357 53541.52085210147 57964.64187299494 51569.72677658965 1.2865885789435427 1.1553597830102484 1.2814460054250625 1.1667647647838426 1.2367487943152276 1.1019645696350964 1.255673425624572 1.1791120013268521 1.03823549587637 1.1240052157753198 1.0 15.654236781512731 -8.756325075497521 3.2914491591545674 1.016037965768168 1.208444762066397 0.5343581824198019 0.06204698837163375 0.08133733932528829 1.793640061619777 0.008567428751210263 0.009347455830281556 1.7525681889446733e-09 8.756325075497521 0.192406796298229 TNKS(ph)PEAKPLPGKLPK ddPTM_A549_PD325901_60min_R1 2 TNKSPEAKPLPGKLPK 16 3 P46087-2;P46087;P46087-4;F5GWB7;F5H709;F5H5X6;P46087-3;F5H359 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.013)NKS(0.987)PEAKPLPGKLPK;T(0.177)NKS(0.823)PEAKPLPGKLPK 89.01100000000001 2.0721e-06 65907000.0 15852.0 14406.800000000001 16938.4 13965.2 16557.3 19124.2 19064.7 19592.9 18065.8 15887.2 18262.1 True False 17461.28337037439 15620.911596668991 18087.941682873672 14827.798686729619 15394.372367584105 18968.458855808298 19790.217591104145 19202.104239167307 17306.557251511804 14884.07948067349 16015.977472989995 1.090241504136842 0.9753330149853633 1.1293685766839971 0.9258129084993926 0.9611884378300237 1.1843459999739316 1.2356546844848642 1.1989342687045188 1.080580768841508 0.9293269490279077 1.0 13.967224229638411 -7.219677443119977 24.993908471032697 1.0779552423837284 1.0153526771893502 0.1336206781546514 0.10007224994989139 1094.0773831412841 654789.6716823583 0.015374221927966865 0.02662877348756276 6.030072821492578e-08 7.219677443119977 -0.06260256519437823 TNLSGRQS(ph)PSFK ddPTM_A549_MK2206_60min_R1 4 TNLSGRQSPSFK 12 1 Q6IN85-4;Q6IN85-2;Q6IN85 Q6IN85-4 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 TNLS(0.001)GRQS(0.887)PS(0.112)FK;TNLS(0.004)GRQS(0.994)PS(0.003)FK;T(0.001)NLS(0.006)GRQS(0.822)PS(0.171)FK;TNLS(0.009)GRQS(0.99)PSFK 97.86 0.00020988 122583100.0 7339.6 9009.6 8296.5 7811.800000000001 11440.6 8352.0 7426.9 6682.4 13782.899999999998 13017.099999999999 14318.2 True False 8578.345044008363 9468.15015688699 9473.068453535541 9725.69135068503 9757.702895271173 9235.803096391099 8776.271594649252 7629.650663991714 10661.095156768564 10076.528069231414 10762.595777783265 0.7970516798295305 0.8797273773332323 0.8801843578563421 0.9036566597401466 0.9066309928143501 0.8581389924033146 0.8154419041515718 0.708904322109844 0.9905691319166494 0.9362544387323298 1.0 13.393738455965353 -8.930900104020543 20.641826727762638 0.9958394539907867 0.849761602188719 0.5074004206427412 0.056726707303279326 5.358471204121144 1600.3020307263635 0.00957505391003325 0.01019319465966441 1.1724650237579532e-09 8.930900104020543 -0.14607785180206767 TNLSGRQS(ph)PSFK ddPTM_A549_PD325901_60min_R1 3 TNLSGRQSPSFK 12 1 Q6IN85-4;Q6IN85-2;Q6IN85 Q6IN85-4 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 TNLS(0.002)GRQS(0.998)PSFK;TNLSGRQS(0.982)PS(0.018)FK;TNLS(0.007)GRQS(0.993)PSFK 107.82 3.4654000000000004e-05 117635700.0 11495.2 11417.6 12264.0 14638.499999999998 13580.7 17924.2 15758.100000000002 16136.7 15748.099999999999 13790.5 17089.7 True False 12662.184241681025 12379.80122207069 13096.30878942301 15542.68689855437 12626.838482871573 17778.231257949577 16357.78311866319 15814.840859503747 15086.262122492937 12919.765476498542 14987.775240534067 0.8448341423906905 0.8259932527270507 0.8737993851151682 1.0370242847330375 0.8424758364885672 1.1861821366168337 1.091408354885385 1.0551826809313833 1.00657114751044 0.862020231098566 1.0 13.87149862756809 -6.21524998529894 1.3292368396076453 1.020897197765248 0.8223032246135753 0.3756181558446261 0.09192209229589043 0.3203258101722402 1.0129434919389042 0.01151040114937171 0.052611275502117465 6.091861411894129e-07 6.21524998529894 -0.1985939731516726 TNLTSQSSTTNLPGSPGS(ph)PGSPGSPGSPGSVPK ddPTM_A549_PD325901_60min_R1 1 TNLTSQSSTTNLPGSPGSPGSPGSPGSPGSVPK 33 0 Q6IN85-4;Q6IN85-2;Q6IN85 Q6IN85-4 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 TNLTSQSSTTNLPGS(0.017)PGS(0.802)PGS(0.154)PGS(0.025)PGS(0.001)PGSVPK 102.78 1.513e-14 6108200.0 519.16 489.22 503.04 547.12 539.47 388.47 568.02 524.62 343.84 453.2 549.23 True False 571.8647410146081 530.4482863177391 537.1793194252567 580.9143598003259 501.57948827046636 385.30642911681815 589.6363119324703 514.1560425435717 329.38960053580894 424.5848746564041 481.6781918558274 1.1872340302792341 1.101250368579089 1.115224497408929 1.2060217166198821 1.041316581799069 0.7999250031069404 1.2241291424481935 1.0674264503497917 0.6838374792654087 0.881469997677387 1.0 8.91192579666894 -7.798423541045141 0.8045635244178864 0.8630276603483352 1.1359954705647293 0.2908507213889895 0.13974977418904883 0.5420847102731905 0.7077441086517088 0.03376861255043117 0.060002250032696026 1.5906566994539836e-08 7.798423541045141 0.27296781021639405 TNLTSQSSTTNLPGSPGSPGS(ph)PGSPGSPGSVPK ddPTM_A549_MK2206_60min_R1 2 TNLTSQSSTTNLPGSPGSPGSPGSPGSPGSVPK 33 0 Q6IN85-4;Q6IN85-2;Q6IN85 Q6IN85-4 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 TNLTSQSSTTNLPGS(0.013)PGS(0.046)PGS(0.879)PGS(0.044)PGS(0.017)PGS(0.001)VPK;TNLTSQSSTT(0.001)NLPGS(0.024)PGS(0.13)PGS(0.663)PGS(0.143)PGS(0.037)PGS(0.002)VPK 100.73 1.7972999999999998e-14 13592900.0 982.8299999999999 1044.02 1173.3600000000001 885.5899999999999 1183.77 741.9000000000001 923.27 1022.5799999999999 1971.15 1423.58 1326.93 True False 1148.7076761135122 1097.1561586300343 1339.76009168209 1102.5595897556454 1009.6390011306366 820.4073655666372 1091.0162079995446 1167.5338465199104 1524.687672279735 1101.9922892807508 997.4166595950574 1.151682864992327 1.0999978274630688 1.3432301123043415 1.1054152536446256 1.0122539977831746 0.8225322463530091 1.0938419741680352 1.1705577957700437 1.528636661130911 1.104846483843723 1.0 9.962052489944835 -8.523788992051676 24.986474490722564 1.2548951927605927 1.0905247003221912 0.08038496944436035 0.16741066640266855 55.03043545211881 1510565.0158278318 0.03728406425196953 0.0424567147333581 2.9937188227839893e-09 8.523788992051676 -0.16437049243840152 TNLTSQSSTTNLPGSPGSPGS(ph)PGSPGSPGSVPK ddPTM_A549_PD325901_60min_R1 1 TNLTSQSSTTNLPGSPGSPGSPGSPGSPGSVPK 33 0 Q6IN85-4;Q6IN85-2;Q6IN85 Q6IN85-4 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 TNLTSQSSTT(0.001)NLPGS(0.033)PGS(0.143)PGS(0.667)PGS(0.152)PGS(0.004)PGS(0.001)VPK 98.18299999999999 3.7629000000000005e-10 7539200.0 466.96 638.87 565.66 446.35 476.9 798.92 878.9 751.58 710.38 673.94 477.25 True False 514.3654354422165 692.7098170144599 604.0490891899069 473.92002576560066 443.4041892156849 792.413860401082 912.3470204525339 736.589147296896 680.5251990129941 631.3873133846802 418.5512755370127 1.2289185710454988 1.6550178138286504 1.443190176436317 1.1322866598782868 1.059378420593236 1.8932300693251822 2.1797735994997693 1.7598540258940367 1.6259064033190718 1.5085064848377132 1.0 8.709260563880212 -10.65018151561206 1.0071125951761286 1.0120206566204546 1.558536708106887 0.03242455116375054 0.34843840744905313 0.5678221036614232 1.0577707044164981 0.20999634651175697 0.061297583993780456 2.2377856490658515e-11 10.65018151561206 0.5465160514864325 TNMSSVKT(ph)PETVVPTAPELQISTSTDQPVTPKPTSR ddPTM_A549_PD325901_60min_R1 1 TNMSSVKTPETVVPTAPELQISTSTDQPVTPKPTSR 36 2 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 T(0.151)NMS(0.151)S(0.151)VKT(0.535)PET(0.011)VVPT(0.001)APELQISTSTDQPVTPKPTSR 78.639 6.850599999999999e-06 9632100.0 1195.0 863.9 1116.7 725.34 999.8 1038.8 1416.1 1257.3 886.99 1349.4 1091.3 True False 1316.3155202874964 936.7038848573136 1192.4859772626126 770.1426044333392 929.5774971227547 1030.340357213042 1469.9904604196527 1232.2221651672303 849.7128948908131 1264.1986537099554 957.0770183206752 1.3753496271357086 0.9787131724266986 1.2459665778570206 0.8046819531668011 0.971267180517852 1.0765490524690662 1.5359165796279963 1.28748485396644 0.8878208113091595 1.3208954237854 1.0 9.902491216344302 -8.776180241847241 24.90984139886142 0.9470264847448635 1.1480293949509313 0.0 0.22566463876294776 296.0603576468708 500295.73797955486 0.035166987378981586 0.03751530166377614 1.6742478817939045e-09 8.776180241847241 0.20100291020606775 TNNHIGGGAFSVDS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TNNHIGGGAFSVDSPR 16 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 TNNHIGGGAFS(0.365)VDS(0.635)PR;TNNHIGGGAFS(0.376)VDS(0.624)PR 73.831 0.00017591 17919700.0 3325.9 3431.8 3219.6000000000004 3636.9 4904.7 4101.299999999999 3646.6 3955.8999999999996 4753.9 4082.5 4446.9 True False 3663.5429196018285 3721.009829903146 3438.1014170275894 3861.5430530008116 4560.2107922964315 4067.900372581679 3785.373358496087 3876.996471156487 4554.110115132565 3824.7302532761905 3899.9594912216708 0.9393797365967552 0.9541149948553778 0.8815736226918082 0.9901495289098952 1.169296963868703 1.0430622117327175 0.9706186351464667 0.994111984979108 1.1677326714247434 0.9807102514488133 1.0 11.929243423478736 -6.527378926032181 24.745200766392426 1.068846243165207 0.9292535893226201 0.3516242768226592 0.06827040313110919 83.37998551118116 458482.62860714935 0.011080427018371745 0.023137595120758993 2.9690743558886936e-07 6.527378926032181 -0.1395926538425869 TNNNQILEVKS(ph)PIK ddPTM_A549_MK2206_60min_R1 2 TNNNQILEVKSPIK 14 1 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 TNNNQILEVKS(1)PIK;TNNNQILEVKS(1)PIK 183.65 1.4185000000000002e-26 140552000.0 43775.0 47410.0 45517.0 39003.0 61577.0 48629.0 45139.0 43988.0 64324.0 66225.0 67124.0 True False 51163.14980400376 49822.96649551722 51971.99503399953 48558.736750911194 52519.10487055868 53774.8885026823 53340.17201132005 50223.43370760021 49754.716704320665 51264.72650473998 50455.2582718445 1.014030084403597 0.9874682679668273 1.030061024640546 0.9624118162131851 1.0409044898272946 1.0657935435183423 1.0571776627112306 0.995405343819761 0.9861155885131053 1.0160432878677224 1.0 15.622717009384598 -4.444519268802855 16.27003264007644 1.005133227076072 1.015452897884237 0.0 0.03177660822641807 0.0 0.0 0.004393726653611532 0.0 3.593194540952632e-05 4.444519268802855 0.010319670808164982 TNNNQILEVKS(ph)PIK ddPTM_A549_PD325901_60min_R1 4 TNNNQILEVKSPIK 14 1 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 TNNNQILEVKS(1)PIK;TNNNQILEVKS(1)PIK;TNNNQILEVKS(1)PIK;TNNNQILEVKS(1)PIK 142.43 1.6433e-13 391020000.0 33924.2 33357.5 33659.3 31199.499999999996 38305.8 33303.0 34900.8 34038.0 36362.299999999996 36468.399999999994 39926.0 True False 37368.15981032391 36168.65359315642 35943.62250781358 33126.62225579444 35615.33275583598 33031.79140957447 36228.969042450575 33359.08538770556 34834.11898430446 34165.7790002639 35015.35511176695 1.0671935124189644 1.0329369351733892 1.0265102950715097 0.9460598685935419 1.0171347011090974 0.9433516040074116 1.0346594780149978 0.9526987597648326 0.9948240956893343 0.9757370413982308 1.0 15.095700098339092 -5.78574100161345 2.1998949049780627 0.9917482324641013 1.05870927165157 0.4353104288958676 0.02933380084459688 0.22154510833653437 2.0313351472707195 0.0035811677314385123 0.01909579355530898 1.6377929539878797e-06 5.78574100161345 0.06696103918746876 TNNNQILEVKS(ph)PIKQSK ddPTM_A549_PD325901_60min_R1 2 TNNNQILEVKSPIKQSK 17 2 P42568-2;P42568;A0A0D9SF09;B1APT5 P42568-2 MLLT3 Protein AF-9 1 TNNNQILEVKS(0.992)PIKQS(0.008)K;TNNNQILEVKS(1)PIKQSK 97.25299999999999 3.7683e-07 99475000.0 10081.6 10096.0 13055.3 13279.3 15035.6 17269.3 14147.900000000001 15490.6 15957.8 14203.300000000001 13920.6 True False 11105.076610318343 10946.825351915084 13941.311165896464 14099.532201521548 13979.551326004097 17128.664546418175 14686.306076527937 15181.627830859386 15287.149160744333 13306.501214049658 12208.454449953986 0.9096218244366058 0.8966593926192142 1.1419390737006034 1.1548990299566289 1.1450713424299819 1.4030166239824675 1.2029619422123732 1.2435339700937007 1.2521772697281883 1.0899415047659706 1.0 13.57559295100328 -5.776497313653934 6.0994885257261275 1.159786242338607 0.901153365270193 0.5330468840480589 0.09884913481080797 0.11096354430978267 14.767638132874348 0.017273526637406944 0.059281215384052434 1.6730259849364698e-06 5.776497313653934 -0.258632877068414 TNNVS(ph)EHEDTDKYR ddPTM_A549_MK2206_60min_R1 1 TNNVSEHEDTDKYR 14 1 E9PP73;P53618 E9PP73 COPB1 Coatomer subunit beta 1 T(0.001)NNVS(0.999)EHEDTDKYR 90.223 2.9381999999999998e-05 3589300.0 857.77 1225.3 930.37 975.71 1357.5 886.69 758.33 795.75 1101.9 1632.3 1666.3 True False 1002.5406055369567 1287.66253632055 1062.3104558688433 1214.7589938012866 1157.8135482693758 980.5189472628135 896.1087450174863 908.5499993821695 852.3214093727223 1263.562296318415 1252.5117224595442 0.8004241298183447 1.02806425938432 0.8481441225817794 0.9698583829745537 0.9243933829184364 0.7828421320779168 0.7154493877772312 0.7253824320287073 0.6804897663544639 1.0088227308860398 1.0 10.290608390561701 -7.248734653070512 23.219056362392287 0.8200139486059757 0.919928881930332 0.1473846203218313 0.1137868567671069 543.5615704857707 993405.2356906862 0.019988569961875494 0.0344421287715402 5.6398213457502054e-08 7.248734653070512 0.0999149333243563 TNPPTQKPPS(ph)PPMSGR ddPTM_A549_MK2206_60min_R1 8 TNPPTQKPPSPPMSGR 16 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 T(0.004)NPPT(0.027)QKPPS(0.777)PPMS(0.192)GR;TNPPT(0.001)QKPPS(0.974)PPMS(0.025)GR;TNPPT(0.035)QKPPS(0.953)PPMS(0.011)GR;TNPPT(0.013)QKPPS(0.916)PPMS(0.072)GR;TNPPT(0.001)QKPPS(0.973)PPMS(0.026)GR;TNPPT(0.001)QKPPS(0.973)PPMS(0.027)GR;TNPPT(0.002)QKPPS(0.998)PPMSGR;TNPPTQKPPS(1)PPMSGR 161.59 4.702699999999999e-21 1090180000.0 111779.5 121945.0 123298.0 109097.59999999999 161091.0 126806.0 117047.5 121803.79999999999 174952.0 177554.0 180295.0 True False 130645.14685360668 128151.47963079199 140783.51041813113 135826.5168975774 137394.72729595716 140224.52675298954 138313.51566261944 139069.86165849288 135325.65134093526 137444.4280833914 135522.7756111407 0.9640087894043025 0.9456084341018857 1.038818086356829 1.0022412563871053 1.0138128198479914 1.034693438948887 1.0205924062497531 1.0261733574401541 0.9985454528265341 1.0141795536845004 1.0 17.048175802031114 -5.746460064368992 24.999980214884943 1.00800542605069 0.9548085833137726 0.6840315920336466 0.015309283266467185 121.04168763978544 202011.03248897588 0.0023141104093008544 0.00888883226980538 1.7928334051198443e-06 5.746460064368992 -0.05319684273691749 TNPPTQKPPS(ph)PPMSGR ddPTM_A549_PD325901_60min_R1 8 TNPPTQKPPSPPMSGR 16 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TNPPT(0.003)QKPPS(0.993)PPMS(0.004)GR;TNPPT(0.025)QKPPS(0.921)PPMS(0.053)GR;TNPPT(0.001)QKPPS(0.929)PPMS(0.07)GR;TNPPT(0.035)QKPPS(0.936)PPMS(0.029)GR;TNPPTQKPPS(0.999)PPMS(0.001)GR;TNPPT(0.001)QKPPS(0.981)PPMS(0.018)GR;TNPPT(0.001)QKPPS(0.999)PPMSGR;TNPPT(0.017)QKPPS(0.966)PPMS(0.017)GR 143.4 7.7015e-15 1808198000.0 60414.28 61211.200000000004 61760.21 66032.24 76728.34 75981.56 74236.65999999999 74552.51999999999 73954.52 76702.55 78893.57 True False 66547.49323095781 66369.68264472514 65951.62924491276 70110.90149470224 71339.20609680313 75362.7913669659 77061.77672015899 73065.51150327959 70846.46870817091 71859.53790286095 69190.16103754546 0.9618057283440398 0.9592358458120972 0.9531937526366598 1.0133073900009735 1.0310599805959624 1.0892125446285768 1.1137678474016277 1.0560101379678999 1.0239384855561569 1.0385802955981989 1.0 16.078279278227303 -6.362767096937666 3.5446007001795565 1.0298218957067713 0.9578528748670189 0.5478262090174049 0.033507134756809345 0.2048762135523487 4.765731630350047 0.005944823862403929 0.014892503720470794 4.3374342356864895e-07 6.362767096937666 -0.07196902083975243 TNPPTQKPPSPPMS(ph)GR ddPTM_A549_PD325901_60min_R1 1 TNPPTQKPPSPPMSGR 16 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TNPPTQKPPS(0.331)PPMS(0.669)GR 87.932 1.0694000000000001e-05 3683100.0 736.92 512.36 723.51 449.17 962.8 939.55 737.39 732.66 983.23 715.77 933.62 True False 811.7315759081682 555.5383753275767 772.611739419067 476.91421076091603 895.1762494796841 931.8986163068095 765.4517799652907 718.046521539349 941.9082623744281 670.5761600459274 818.7906587048 0.9913786476169646 0.6784864597824704 0.9436010672632967 0.5824617143474994 1.0932907452751284 1.1381402638141094 0.9348565128675466 0.8769598357108609 1.1503651786457616 0.8189836473057411 1.0 9.677350833028653 -6.79198469573495 24.999943616875754 1.053582192631029 0.8007049164550841 0.2631206842172412 0.14790535399183774 129.96140505224258 106367.13249491344 0.018273556892486727 0.03453660768199794 1.6144154468114992e-07 6.79198469573495 -0.2528772761759448 TNPS(ph)PTNPFSSDLQK ddPTM_A549_PD325901_60min_R1 2 TNPSPTNPFSSDLQK 15 0 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 TNPS(0.99)PT(0.01)NPFSSDLQK;TNPS(0.973)PT(0.027)NPFSSDLQK 255.96 7.487499999999999e-77 66405000.0 11086.3 11443.6 12007.3 11283.0 12675.3 13653.4 11551.7 12302.8 11260.0 11770.1 12162.2 True False 12211.773014697288 12407.992333317696 12822.18758376051 11979.925284447785 11785.030655411136 13542.21123717035 11991.306264832785 12057.411002640107 10786.781357704767 11026.933877302174 10666.326502537995 1.1448902311204858 1.1632863789014223 1.2021184219993208 1.1231538132268148 1.104881859054938 1.269622792246989 1.1242208141649817 1.130418330975628 1.0112930028101157 1.0338080195349706 1.0 13.38077577510404 -8.681494383439734 2.4575093008256235 1.0037101772448642 1.1633400235660414 0.6826643733971265 0.04350954427457295 0.0985028937469813 1.1813434160622287 0.007334854978027408 0.008160751553961907 2.0821193322790108e-09 8.681494383439734 0.15962984632117716 TNQELQEINR ddPTM_A549_MK2206_60min_R1 1 TNQELQEINR 10 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 119.34 0.00016445 31649000.0 14534.0 16182.0 15962.0 14122.0 19873.0 15967.0 14445.0 15013.0 21919.0 21956.0 23172.0 False True 16986.983877815877 17005.594681089646 18225.65161879519 17581.890633960673 16949.708025603923 17656.6173419632 17069.469520891427 17141.138725384222 16954.381497450493 16996.124350895756 17417.75288533432 0.9752683936697053 0.9763368898985981 1.0463836373600819 1.0094235892371946 0.9731282868225505 1.0137138503572412 0.9800041161029361 0.9841188377300377 0.9733966034003166 0.9757931727924803 1.0 14.088270889232552 -7.785795588331793 24.99048004430325 0.9863096948574646 0.99945620644685 0.12095928024496472 0.020947675016964425 489.42560375173724 502168.39125786757 0.0034197827972516966 0.004726254886017474 1.6375871118043675e-08 7.785795588331793 0.013146511589385401 TNQELQEINR ddPTM_A549_PD325901_60min_R1 2 TNQELQEINR 10 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 187.33 9.592000000000001e-14 111772000.0 60972.0 61613.0 60863.0 63518.0 77027.0 69778.0 68891.0 72682.0 77653.0 76787.0 80126.0 False True 67161.83255478596 66805.34374084223 64993.52917895079 67441.36260015557 71616.88924872417 69209.75110282213 71512.68470360183 71232.30049207386 74389.51445558156 71938.65571544852 70271.00996056302 0.9557544795852233 0.9506814229414695 0.9248981794259963 0.9597323652812805 1.019152695954085 0.9848976290744009 1.0176698007291436 1.0136797597195533 1.0586088701063197 1.0237316320887007 1.0 16.100642013199078 -6.888804931815579 1.1099950264688225 1.025918260842468 0.9413089217177864 0.7268574601836326 0.01992498466498954 0.2283967158693315 0.5508687167667634 0.0040941972315448145 0.011382416752436291 1.291799369342967e-07 6.888804931815579 -0.0846093391246816 TNREDCFES(ph)ESEDEFYK ddPTM_A549_MK2206_60min_R1 1 TNREDCFESESEDEFYK 17 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 T(0.005)NREDCFES(0.961)ES(0.035)EDEFYK 97.488 4.7138999999999993e-07 1753700.0 1373.7 1594.5 1171.0 1104.3 1787.1 1467.5 910.13 1293.6 2131.8 1653.5 1512.3 True False 1605.5469762595073 1675.6532393398497 1337.065408195036 1374.8535495739116 1524.2199573570556 1622.7898759523378 1075.48884008646 1476.971761483851 1648.950703785071 1279.9732015943766 1136.754172643324 1.412395938275808 1.4740682547427204 1.176213327711763 1.2094554677348832 1.3408527490273006 1.4275644770045772 0.9461050295382667 1.299288621082789 1.4505780963624908 1.1259894464411966 1.0 10.150704584403904 -10.979426948204422 1.2294842050858446 0.9987221174951103 1.3118295648580827 0.2676552630510157 0.14938535488644997 0.4117728939063812 1.0998151342986946 0.10887937926515762 0.02462524490950142 1.0485111466858751e-11 10.979426948204422 0.31310744736297236 TNRGS(ph)QLHK ddPTM_A549_MK2206_60min_R1 1 TNRGSQLHK 9 1 P42356;P42356-2 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 T(0.013)NRGS(0.987)QLHK 67.385 0.0013772 11308000.0 1466.3 1506.3 1200.7 1146.5 1456.3 1313.4 1142.8 1471.7 1790.5 2414.0 2012.1 True False 1713.7755924068683 1582.9642360725093 1370.9773147905883 1427.3925514683403 1242.0801991489448 1452.3831162356405 1350.4319673571974 1680.317981892226 1384.9546088409647 1868.6757234041884 1512.440038865061 1.1331196929254068 1.0466294169654287 0.9064672182438209 0.9437680270217254 0.8212426061406077 0.9602913695180356 0.8928829789315582 1.1109980817177658 0.9157087707624021 1.23553706288181 1.0 10.562662232109306 -5.532190140307814 3.817694695099607 0.9520961072756017 1.1216261259314184 0.12591707177900968 0.10976094972935024 0.1588556430916161 4.94745750977616 0.009457764005296444 0.05189200153413386 2.936363788621796e-06 5.532190140307814 0.16953001865581674 TNRGS(ph)QLHK ddPTM_A549_PD325901_60min_R1 3 TNRGSQLHK 9 1 P42356;P42356-2 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 T(0.036)NRGS(0.964)QLHK;T(0.122)NRGS(0.878)QLHK;T(0.201)NRGS(0.799)QLHK 49.081 0.0086378 34724500.0 3793.6000000000004 4144.6 3835.05 4115.6 4274.700000000001 4177.4 3568.73 3736.2999999999997 4228.1 3847.3 5048.3 True False 4178.723479299283 4493.879987474968 4095.319555029087 4369.811264794233 3974.4598189144203 4143.380639412557 3704.5399730339896 3661.776565429353 4050.4076606138146 3604.380821415673 4427.391103810375 0.9438342765117183 1.015017621462755 0.9249961114807556 0.9869946346130146 0.8976979276788659 0.9358515076399307 0.8367320361297484 0.8270732084811513 0.914852012312146 0.8141094240157845 1.0 12.112241107523005 -2.2428738915574917 14.6821099255791 0.941121930016157 1.200790690127218 0.0 0.07002530168085375 0.0 0.0 0.008641284047196657 0.0 0.005716446041161759 2.2428738915574917 0.2596687601110611 TNRT(ph)SQDYDQLPSCSDGSQAPARPPKPR ddPTM_A549_PD325901_60min_R1 1 TNRTSQDYDQLPSCSDGSQAPARPPKPR 28 3 Q13191 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 T(0.07)NRT(0.465)S(0.465)QDYDQLPSCSDGSQAPARPPKPR 153.88 1.0564e-37 9751300.0 1092.0 891.29 1556.3 1220.1 1472.5 879.01 770.01 985.63 1238.9 1298.7 1385.8 True False 1202.8590361120882 966.4021362825265 1661.9198767921575 1295.4628059518527 1369.0766798492264 871.851633994837 799.3131519156399 965.9708364382229 1186.8333413908033 1216.6998603624716 1215.3553853099888 0.9897179464139098 0.7951601218568968 1.367435317175369 1.0659127540883293 1.126482588053888 0.717363533772027 0.6576785371397905 0.7948052463616164 0.9765319311010329 1.001106240255923 1.0 10.24716252248918 -4.897164053394102 19.46240872395967 0.9646461526466219 3.506770379020125 0.0 0.19408405643503865 6678.662594559262 1217690.9141665804 0.02631122198801123 27591.70587552127 1.2671731047265612e-05 4.897164053394102 2.5421242263735033 TNS(ph)ESLR ddPTM_A549_MK2206_60min_R1 2 TNSESLR 7 0 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 T(0.001)NS(0.994)ES(0.005)LR;T(0.002)NS(0.995)ES(0.003)LR 125.57 0.0059878 124412000.0 3933.0 5517.1 4894.4 6568.0 10227.9 7999.1 7478.4 9209.4 12581.0 12689.9 13885.9 True False 4596.794247381995 5797.896824560604 5588.499516541228 8177.160294848726 8723.389458817204 8845.559452627152 8837.128478022461 10514.86065260464 9731.423587728665 9823.242776481684 10437.6477986563 0.4404051886071273 0.5554792551351465 0.5354175216815295 0.7834294136559599 0.8357620056829488 0.8474667495262576 0.846659002918274 1.0073975339499652 0.9323387582575308 0.9411356817142544 1.0 13.34950900605866 -5.924483973518698 0.46374922715639316 0.9790005373473716 0.23567128139222285 0.936285841957834 0.04722456073247805 0.42757127686000596 0.08908467185908073 0.010173896900256498 0.15486686908484137 1.1899152390029262e-06 5.924483973518698 -0.7433292559551488 down TNS(ph)ESLR ddPTM_A549_PD325901_60min_R1 1 TNSESLR 7 0 B9EGE7;Q8TCN5;Q8TCN5-2 B9EGE7 ZNF507 Zinc finger protein 507 1 T(0.005)NS(0.991)ES(0.004)LR 112.75 0.0077393 91578000.0 2629.3 2672.5 2808.9 2958.7 2896.3 2730.4 2369.7 3117.7 2656.2 3143.0 3641.9 True False 2896.224600411641 2897.7209541395664 2999.528845287857 3141.452179304767 2692.873879692574 2708.1645276612344 2459.8802302495956 3055.515027711664 2544.569151184317 2944.5504436122656 3193.969387906228 0.9067790728921887 0.9072475663391176 0.939122602942092 0.9835573851144866 0.8431119878258628 0.8478993373936318 0.7701639970513755 0.95665131897669 0.7966792546037461 0.9219094130211855 1.0 11.641134770195354 -3.617318586759059 10.220837026940924 0.8978226918042144 1.3015911862224778 0.0 0.07117116680194206 0.0 0.0 0.011204574906065641 0.0 0.0002413689567055486 3.617318586759059 0.40376849441826346 TNS(ph)FNSHQPR ddPTM_A549_MK2206_60min_R1 1 TNSFNSHQPR 10 0 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 T(0.207)NS(0.79)FNS(0.002)HQPR 53.001000000000005 0.0067792 6808400.0 2390.9 2474.8 1760.5 1469.7 2953.3 1872.7 1470.4 2427.0 2750.5 3126.6 3518.5 True False 2794.425468107196 2600.7567492745443 2010.1653724401035 1829.776565977341 2518.873482212854 2070.8678710023473 1737.5526468341116 2771.034682375776 2127.5161416459505 2420.2988884819924 2644.759344340101 1.0565896946682076 0.9833623444190775 0.7600560620919797 0.69184992951935 0.9524017705442092 0.7830080553204563 0.6569794906113288 1.0477454927254193 0.8044271196919776 0.9151301019737529 1.0 11.368920737238536 -10.923158569544984 0.9858767707427222 1.0069740432937015 0.8510234881215384 0.05986249666619681 0.13251200208139288 0.9686870294682318 1.5415939127302791 0.11379918163948806 0.022322649943824015 1.1935522352593079e-11 10.923158569544984 -0.15595055517216316 TNS(ph)FNSHQPR ddPTM_A549_PD325901_60min_R1 1 TNSFNSHQPR 10 0 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 T(0.047)NS(0.948)FNS(0.006)HQPR 68.277 0.0012825999999999998 8185200.0 4176.6 4014.1 3915.6 3637.7 4508.8 3471.7 3424.9 3269.4 3527.5 4221.0 5397.1 True False 4600.605357349589 4352.3822944851745 4181.336162415583 3862.3924671838827 4192.117442515579 3443.427626238468 3555.23644367719 3204.1892522053154 3379.251442211685 3954.4853396396356 4733.290915035749 0.9719675887098611 0.9195256265908816 0.8833887959713549 0.8160057212867744 0.8856665516161111 0.727491229262941 0.7511130221013128 0.676947457851556 0.7139327590191364 0.835462136307286 1.0 12.208627879626889 -5.71674253537255 1.4033897806352407 0.8292350011018502 0.9790676669519183 0.26303258452591716 0.08839652236014776 1.0579417891116722 3.1143599445639265 0.018323307790408607 0.17588924554556618 1.9198065303704486e-06 5.71674253537255 0.14983266585006805 TNS(ph)FNSHQPRPGPPGK ddPTM_A549_MK2206_60min_R1 2 TNSFNSHQPRPGPPGK 16 1 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 T(0.324)NS(0.671)FNS(0.005)HQPRPGPPGK;T(0.009)NS(0.959)FNS(0.032)HQPRPGPPGK 68.952 0.00076794 13292700.0 1993.1599999999999 2504.8 2064.21 1712.63 2401.1000000000004 1870.1100000000001 1930.5299999999997 1761.51 3183.0 3293.1000000000004 3487.1000000000004 True False 2329.5566799165754 2632.2836211341814 2356.9460172931463 2132.2244268828817 2047.9013707179367 2068.0037989214493 2281.28231181492 2011.2094368981263 2462.05558220653 2549.1864228427225 2621.1568309360146 0.8887513529988555 1.004244992160272 0.8992006847798883 0.8134669401378264 0.7812967719244146 0.7889660681550923 0.8703341535654219 0.7672983978528 0.9393011334340229 0.9725425021334602 1.0 11.355987961275636 -8.954699900782995 5.99463682987524 0.9738340347988336 0.8529058948382023 0.41191622857071286 0.06433813342599128 0.14905021494398618 11.86988286046409 0.012618371820519822 0.013193407061743821 1.1099415243471488e-09 8.954699900782995 -0.12092813996063123 TNS(ph)FNSHQPRPGPPGK ddPTM_A549_PD325901_60min_R1 4 TNSFNSHQPRPGPPGK 16 1 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 T(0.164)NS(0.826)FNS(0.011)HQPRPGPPGK;T(0.035)NS(0.958)FNS(0.007)HQPRPGPPGK;T(0.139)NS(0.861)FNS(0.001)HQPRPGPPGK;T(0.034)NS(0.927)FNS(0.039)HQPRPGPPGK 137.05 6.7253e-11 36842000.0 7903.000000000001 8050.4 7961.4 8872.7 10005.400000000001 9180.3 8083.599999999999 9222.1 9438.6 10084.6 10063.0 True False 8705.306742118895 8728.835460881251 8501.70847978737 9420.746527636262 9302.655220756158 9105.538680518768 8391.225821515653 9038.157980902508 9041.928465615654 9447.856634951399 8825.314794612803 0.9864018388820347 0.989067887551111 0.9633320371730003 1.0674686112485103 1.0540876373537107 1.0317522822049385 0.9508132023390112 1.0241173477936028 1.0245445829462172 1.0705404685075495 1.0 13.107432024182108 -6.186755655866434 24.99999695317327 1.0158454351107509 0.9805473149158072 0.24042861481909772 0.03357438024369336 163.0272920521912 54571.695072480936 0.004199332446049882 0.011110385904797139 6.504955712804558e-07 6.186755655866434 -0.035298120194943716 TNS(ph)LSRPGALPPR ddPTM_A549_MK2206_60min_R1 1 TNSLSRPGALPPR 13 1 Q5JPT2;Q96B97-2;Q96B97;Q5VSN0;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 T(0.224)NS(0.597)LS(0.178)RPGALPPR 40.724000000000004 0.028939999999999997 6677400.0 2687.6 2852.7 2547.5 2049.9 3613.7 2379.4 2466.7 2451.8 3823.4 4200.9 4183.4 True False 3141.201174488647 2997.8902451331387 2908.7738064704113 2552.125592023508 3082.129517039444 2631.1865286821076 2914.867460518026 2799.350158322592 2957.406004715187 3251.913772348237 3144.546324033641 0.9989362059895804 0.953361768666082 0.9250217699891301 0.8116037510777675 0.9801507751636069 0.8367459905335325 0.9269596183843154 0.8902238573899425 0.9404873390198935 1.0341440186439586 1.0 11.61863617353792 -9.807304295601519 0.840273754507035 0.9930220248578222 0.914023063970039 0.30950427453058915 0.054652687696820454 0.5226691836519047 0.7669431647317674 0.01943286019364021 0.010617777164205066 1.5584601593373455e-10 9.807304295601519 -0.07899896088778324 TNS(ph)LSRPGALPPR ddPTM_A549_PD325901_60min_R1 2 TNSLSRPGALPPR 13 1 Q5JPT2;Q96B97-2;Q96B97;Q5VSN0;Q96B97-3 Q5JPT2 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 T(0.003)NS(0.918)LS(0.079)RPGALPPR;T(0.161)NS(0.677)LS(0.161)RPGALPPR 107.73 2.2361999999999997e-05 21365000.0 4570.9 4245.0 3815.5 4162.6 4711.4 4267.1 3924.5 4773.7 4750.4 5116.6 5473.9 True False 5034.934403081266 4602.741047828794 4074.4427744653876 4419.7143480494915 4380.487517447633 4232.350152352497 4073.8489950688017 4678.484808604799 4550.757207960988 4793.53700279558 4800.645001911061 1.0488037338892875 0.9587755491181946 0.848728196490975 0.9206501097852628 0.9124789514125352 0.8816211468808183 0.848604509070566 0.974553379127673 0.9479470375646197 0.9985193658117499 1.0 12.229012540192368 -9.493409028521997 0.8113293442427009 0.9911793848094661 0.9185681878341416 0.21239116983070006 0.05463938441368589 0.6051727064598728 0.8537236489501312 0.01842295174918535 0.012253366021434977 3.2106352641637254e-10 9.493409028521997 -0.07261119697532448 TNS(ph)MGSATGPLPGTK ddPTM_A549_MK2206_60min_R1 4 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.236)NS(0.751)MGS(0.012)AT(0.001)GPLPGTK;T(0.013)NS(0.916)MGS(0.071)ATGPLPGTK;T(0.155)NS(0.645)MGS(0.187)AT(0.013)GPLPGTK;T(0.39)NS(0.488)MGS(0.112)AT(0.009)GPLPGTK 139.29 1.1955000000000002e-10 69491000.0 11544.2 18484.6 12339.400000000001 17688.9 21991.399999999998 17804.1 17267.3 18538.399999999998 34269.5 26603.0 27676.4 True False 13492.578731407886 19425.387185889846 14089.312466167232 22022.681294084898 18756.49419183142 19688.118044594907 20404.5448984485 21166.274971468923 26507.51296714627 20593.36382341409 20803.58605021866 0.6485698522763133 0.9337518608089047 0.6772540288081316 1.0586002452136576 0.9015990871263408 0.946380974754493 0.9808186362290187 1.0174339616436683 1.274179985275551 0.9898949043546096 1.0 14.344544616134066 -6.860192425446267 0.5853733401577004 1.1216170739804603 0.7334643599678907 0.44210861169257853 0.12217328424205562 0.6723945318262783 0.38281833414791333 0.027827475289515877 0.12647185382113535 1.3797727849899978e-07 6.860192425446267 -0.38815271401256957 TNS(ph)MGSATGPLPGTK ddPTM_A549_PD325901_60min_R1 2 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.019)NS(0.91)MGS(0.07)AT(0.001)GPLPGTK;T(0.044)NS(0.952)MGS(0.005)ATGPLPGTK 146.57 3.9994e-14 141497000.0 18674.4 23078.0 20490.7 26155.0 24136.1 18375.0 20605.4 21021.7 28721.0 23529.9 22271.1 True False 20570.21134063332 25022.86405224804 21881.322122588896 27770.534947685206 22440.863601024717 18225.360092211846 21389.549772707524 20602.405702295375 27513.956249967912 22044.218098362144 19531.895888134863 1.0531599931949875 1.2811282732388924 1.1202866453881342 1.4218043710009283 1.1489342217238103 0.9331075793458071 1.0951087336944663 1.054808290003779 1.4086679760914531 1.1286266435483845 1.0 14.253544372586683 -11.255400431159673 1.761989190362904 0.9997142811293158 1.2057137256080788 0.0 0.1510636379201894 0.5218197254264553 2.9225102948060195 0.12135655481598179 0.024599731618777657 5.5539193486018154e-12 11.255400431159673 0.20599944447876295 TNS(ph)MQQLEQWIK ddPTM_A549_MK2206_60min_R1 1 TNSMQQLEQWIK 12 0 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 T(0.161)NS(0.839)MQQLEQWIK 42.809 0.028044 1367900.0 1018.5 1282.9 890.02 753.61 1502.4 1308.1 1008.7 1120.5 1746.5 1433.9 1416.9 True False 1190.3979000657416 1348.1941302910586 1016.2382191304406 938.2444838308386 1281.3989502172458 1446.5222737534955 1191.9677331757127 1279.3343063873335 1350.9205385874018 1109.9809941132005 1065.0446255493778 1.1176976734206825 1.2658569396522938 0.9541743085236812 0.8809438227500257 1.2031410886245886 1.3581799664097094 1.1191716333584283 1.2012025371494828 1.2684168401775295 1.0421920053731488 1.0 10.056698165545104 TNS(ph)PGFQK ddPTM_A549_MK2206_60min_R1 2 TNSPGFQK 8 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 T(0.059)NS(0.941)PGFQK;T(0.013)NS(0.987)PGFQK 111.73 0.0014935 59132000.0 16272.3 18289.9 17443.3 16539.2 22236.0 17160.5 16847.800000000003 17343.7 24836.0 21916.0 25399.0 True False 19018.66642046122 19220.777787520794 19917.02223293635 20591.304742472894 18965.113855851087 18976.412719782023 19908.82717854444 19802.22258785362 19210.685654942292 16965.16037867696 19091.7273232611 0.9961731643469021 1.0067594965125266 1.0432278806260615 1.0785459269253614 0.9933681502324962 0.9939599701207454 1.0427986342696083 1.0372148236019934 1.006230883652746 0.888613172156866 1.0 14.220660015972157 -8.898439108228985 6.829661071584014 1.002724428490655 1.02446656807872 0.14414739865306336 0.04244494021240038 0.3399305909137782 20.01643781095748 0.0044750418952502445 0.004744746812910837 1.2634582389537074e-09 8.898439108228985 0.021742139588065035 TNS(ph)PGFQK ddPTM_A549_PD325901_60min_R1 2 TNSPGFQK 8 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 T(0.064)NS(0.936)PGFQK;T(0.022)NS(0.978)PGFQK 86.624 0.002757 101500000.0 12537.2 11570.6 12283.400000000001 11381.3 13790.2 13562.2 13303.7 12934.8 12949.599999999999 13556.0 13864.2 True False 13809.967314601165 12545.695069024225 13117.025390084696 12084.297052192287 12821.623925607339 13451.753939733087 13809.979583563974 12676.805266845693 12405.373345447037 12700.071846518566 12158.991292404928 1.135782317997671 1.0318039356489095 1.0787922348688745 0.9938568719710081 1.054497335944004 1.1063215373906616 1.1357833270421314 1.0425869187655572 1.0202633628988624 1.0445004475372577 1.0 13.569735927590209 -8.650261729287887 3.362334202323779 1.0092479600889546 1.0729470977181943 0.2391393769028678 0.041488108494654834 0.2076328684738974 4.6149500360390014 0.007061670716728724 0.007966740559232752 2.237372370877172e-09 8.650261729287887 0.06369913762923973 TNS(ph)PSSAK ddPTM_A549_MK2206_60min_R1 1 TNSPSSAK 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 T(0.009)NS(0.804)PS(0.152)S(0.035)AK 57.347 0.016884 6593500.0 2381.4 1839.8 1585.3 858.74 1800.7 1531.4 1381.8 1347.6 1330.3 2372.9 3046.8 True False 2783.3221003598965 1933.4379615788357 1810.119377977447 1069.131338550303 1535.8194153728668 1693.4517315389521 1632.855173691088 1538.6264268519153 1028.9891740525748 1836.860241949377 2290.195472597817 1.2153207591501853 0.8442239907957272 0.7903776772050772 0.4668297319344383 0.6706062577404166 0.7394354550959067 0.7129763346527386 0.671831922323477 0.44930189862150527 0.8020539137062338 1.0 11.161255025042045 -5.243443362263718 1.899604294756803 0.7080874243065479 1.3866420196537472 0.5207358918533653 0.14394744308628393 0.7461791313032983 2.650236818940595 0.028541234390605484 0.9037036490582702 5.708955236335456e-06 5.243443362263718 0.6785545953471993 TNS(ph)SEQER ddPTM_A549_PD325901_60min_R1 2 TNSSEQER 8 0 E7EQ49;A0A087WTQ2;A0A3B3IT47;Q9Y2I8-3;Q9Y2I8;Q9Y2I8-2 E7EQ49 WDR37 WD repeat-containing protein 37 1 T(0.001)NS(0.956)S(0.043)EQER;T(0.023)NS(0.842)S(0.135)EQER 84.507 0.003151 17813700.0 2060.05 2164.86 1966.7200000000003 1789.1599999999999 2026.33 1066.78 1401.52 1307.8 1563.9 1953.32 2783.52 True False 2269.1847594713445 2347.3003497768295 2100.1934460481116 1899.6723497228218 1884.007571259003 1058.092497369782 1454.8556105411712 1281.7149030507478 1498.1747216087474 1829.987041844323 2441.1646861870845 0.9295500513796308 0.9615493633258869 0.860324359897429 0.7781827913830619 0.7717658632042892 0.43343757320299553 0.5959678258387172 0.5250423743646275 0.6137130895289099 0.749636864812519 1.0 11.253353910355099 -6.125362939704077 2.068454769661197 0.7428888544608927 0.9468348558892042 0.2783199322341199 0.15065737688265263 0.5362704433938906 4.380416428366374 0.029550207586937594 0.10765123349998942 7.492677848652524e-07 6.125362939704077 0.20394600142831154 TNS(ph)SSSSPVVLK ddPTM_A549_MK2206_60min_R1 2 TNSSSSSPVVLK 12 0 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;Q7Z589-2 E9PMC9 C11orf30;EMSY Protein EMSY 1 T(0.002)NS(0.712)S(0.096)S(0.186)S(0.003)SPVVLK;TNS(0.25)S(0.25)S(0.25)S(0.065)S(0.186)PVVLK 188.92 1.764e-19 38255000.0 8299.599999999999 10161.6 7576.0 8063.4 10848.5 9442.2 8026.7 8739.8 13506.3 13720.2 14867.1 True False 9700.369574261778 10678.78203629715 8650.39071945823 10038.933361979774 9252.700020921055 10441.367336774905 9485.047490712303 9978.693414514966 10447.14461512913 10620.797290907267 11175.188758913935 0.8680273580635709 0.9555795670815114 0.774071105739329 0.8983233821417269 0.82796811942354 0.9343347626630741 0.8487594881246651 0.8929328738680518 0.9348517363338423 0.9503908631910619 1.0 13.448011579570943 -9.285570422489343 0.6183656646381543 0.9936985369753649 0.8686308480050321 0.3912716856360795 0.04863847824083529 0.3644015819877151 0.31216423942788524 0.01723903037809352 0.011756980238032504 5.181190702324783e-10 9.285570422489343 -0.12506768897033282 TNS(ph)SSSSPVVLK ddPTM_A549_PD325901_60min_R1 1 TNSSSSSPVVLK 12 0 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;Q7Z589-2 E9PMC9 C11orf30;EMSY Protein EMSY 1 TNS(0.485)S(0.485)S(0.023)S(0.006)SPVVLK 196.37 1.9394000000000002e-24 37524000.0 5489.6 5885.4 5553.6 5782.8 7098.1 6695.3 6783.7 6651.4 6842.2 6794.4 7845.7 True False 6046.9001507700705 6381.3833128130955 5930.500692509755 6139.990422308313 6599.553943115647 6640.775696619637 7041.857415683076 6518.732609077645 6554.646128391435 6365.400424460445 6880.728637990023 0.8788168330580279 0.9274284234347026 0.8619000987433438 0.8923459629563167 0.9591359128273205 0.965126812290554 1.0234174004194012 0.9473898698876572 0.9526093053869013 0.9251055752025538 1.0 12.748345632547899 -6.832574313616487 3.371152110289537 0.9772072883618631 0.8899638834019804 0.6146846590780194 0.029150811420822726 0.10320434476096735 2.3560510528332155 0.00393127397021083 0.007977667026400799 1.4703667943783368e-07 6.832574313616487 -0.0872434049598827 TNS(ph)TGGSSGSSVGGGSGK ddPTM_A549_MK2206_60min_R1 3 TNSTGGSSGSSVGGGSGK 18 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 T(0.007)NS(0.497)T(0.497)GGSSGSSVGGGSGK;T(0.006)NS(0.901)T(0.093)GGSSGSSVGGGSGK;TNS(0.494)T(0.494)GGS(0.011)SGSSVGGGSGK 252.66 1.6097e-86 218313000.0 6697.5 7535.200000000001 7184.299999999999 6426.6 9218.800000000001 7081.299999999999 6108.0 6744.9 9882.8 9817.900000000001 9730.400000000001 True False 7827.874261846143 7918.709494558562 8203.141769509475 8001.117288501034 7862.726732070513 7830.63846581349 7217.744536767381 7701.010230389933 7644.361579588656 7600.029571172318 7314.073134621833 1.0702482895327072 1.0826675299532662 1.1215558852808232 1.093934547991736 1.075013414187996 1.0706262190278695 0.986829691735174 1.052903093617768 1.0451579357886611 1.0390967428527458 1.0 12.836459337158804 -7.587370634807036 5.933936009423954 1.0224158681128641 1.0888786376695205 0.6659622618876346 0.02170620479916528 0.09890712080699915 6.631441578982771 0.0037654155710839295 0.005620337985288066 2.5860050294522843e-08 7.587370634807036 0.06646276955665642 TNS(ph)TGGSSGSSVGGGSGK ddPTM_A549_PD325901_60min_R1 4 TNSTGGSSGSSVGGGSGK 18 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 T(0.002)NS(0.902)T(0.09)GGS(0.006)SGSSVGGGSGK;TNS(0.49)T(0.49)GGS(0.013)S(0.001)GS(0.005)S(0.001)VGGGSGK;T(0.098)NS(0.788)T(0.098)GGS(0.013)S(0.002)GSSVGGGSGK;T(0.114)NS(0.499)T(0.234)GGS(0.047)S(0.047)GS(0.047)S(0.011)VGGGSGK 251.41 1.8378999999999997e-86 469639200.0 12721.23 12363.76 11814.4 12117.33 14861.869999999999 12792.62 14050.300000000001 14738.77 12662.000000000002 15036.58 14542.750000000002 True False 14012.679904725437 13405.697445819485 12616.196229758583 12865.789953646881 13818.023521868134 12688.441144099652 14584.991855119177 14444.79367000862 12129.860173291101 14087.167772641198 12754.083944087772 1.0986817999752225 1.0510905765234337 0.9891887402549905 1.0087584502382778 1.0834195213426956 0.9948531936691111 1.143554638581482 1.1325622234676123 0.9510569497948119 1.1045221149866578 1.0 13.638671661337199 -8.784282231846946 24.999996492237585 0.9768879983769119 1.0592397711334423 0.0 0.06309081507506971 193.98902451127907 212307.41175665997 0.009177736689019153 0.0097738370573678 1.6433034542827747e-09 8.784282231846946 0.08235177275653038 TNSEQVDEDADVDTAMAALDDQPAEAQPPS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TNSEQVDEDADVDTAMAALDDQPAEAQPPSPR 32 0 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 TNSEQVDEDADVDT(0.001)AMAALDDQPAEAQPPS(0.999)PR 53.498999999999995 0.0014364 820860.0 0.0 0.0 0.0 233.18 156.74 0.0 0.0 144.15 0.0 202.41 228.83 True False 0.0 0.0 0.0 290.309110467848 133.68375363222245 0.0 0.0 164.5837039408604 0.0 156.68544042014975 172.00519561328548 0.0 0.0 0.0 1.6877926822660747 0.7772076486153356 0.0 0.0 0.9568530959430399 0.0 0.9109343462648726 1.0 7.426308333610891 -11.047196477020751 1.3382938146832615 1.001163681087937 0.35539714454122207 0.14810795813419586 0.5289492700261536 0.6784628336384538 2.1600504057175414 0.3952380575243545 0.08750244551903721 8.970228849986155e-12 11.047196477020751 -0.6457665365467149 TNSEQVDEDADVDTAMAALDDQPAEAQPPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TNSEQVDEDADVDTAMAALDDQPAEAQPPSPR 32 0 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 TNSEQVDEDADVDT(0.042)AMAALDDQPAEAQPPS(0.958)PR;TNSEQVDEDADVDT(0.003)AMAALDDQPAEAQPPS(0.997)PR 54.691 0.0012375 2547000.0 166.49 360.72 0.0 474.51 356.69 0.0 216.63 361.1 245.77 319.85 297.46 True False 183.39194223653988 391.11914034695025 0.0 503.8194050096006 331.63732491369814 0.0 224.87397319448448 353.8975772225303 235.4411415881973 299.6546164140577 260.8743057543003 0.7029896704708981 1.499262793305979 0.0 1.93127262400504 1.271253310880086 0.0 0.8620012329089931 1.3565827274528228 0.9025079756606741 1.148655156158928 1.0 8.027211045826204 -4.9740192484697605 15.689059080267716 0.96408549478833 0.03562255512658223 0.019652102773607516 0.554220362559347 8539431.26041285 140240067.918059 0.06776106780844622 200283804.2137409 1.0616485025783896e-05 4.9740192484697605 -0.9284629396617479 TNSGISSASGGSTEPT(ph)TPDSERPAQALLR ddPTM_A549_MK2206_60min_R1 1 TNSGISSASGGSTEPTTPDSERPAQALLR 29 1 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4;A0A0J9YW54 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 T(0.001)NS(0.001)GIS(0.004)S(0.004)AS(0.003)GGS(0.016)T(0.016)EPT(0.5)T(0.452)PDS(0.003)ERPAQALLR 45.408 0.0098855 4077300.0 1120.9 1427.6 1469.4 1155.3 1838.8 1237.3 1068.1 1570.4 2311.9 1594.5 2225.0 True False 1310.0805166261061 1500.2587422273864 1677.783015202207 1438.3485518633875 1568.31495584363 1368.230264746731 1262.1599442896586 1793.0090091482991 1788.2583413456719 1234.3013425716563 1672.471093123979 0.7833202750183443 0.8970311943778232 1.0031760920114356 0.8600139983147462 0.937723206273301 0.8180890362601354 0.7546677186103662 1.0720717485162445 1.0692312403471296 0.7380105687005488 1.0 10.707765560301867 -8.280503084346696 24.9877481587645 1.0365594430368188 0.8722345378972868 0.06590803257998934 0.1126760109917038 454.0336358503171 595123.094350683 0.011622917676800239 0.014062713491383296 5.241998781430547e-09 8.280503084346696 -0.16432490513953202 TNSGISSASGGSTEPTT(ph)PDSERPAQALLR ddPTM_A549_MK2206_60min_R1 3 TNSGISSASGGSTEPTTPDSERPAQALLR 29 1 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4;A0A0J9YW54 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 T(0.008)NS(0.001)GIS(0.002)S(0.002)AS(0.033)GGS(0.025)T(0.124)EPT(0.167)T(0.637)PDSERPAQALLR;TNSGISSAS(0.002)GGS(0.008)T(0.042)EPT(0.177)T(0.77)PDS(0.001)ERPAQALLR;TNSGIS(0.008)S(0.007)AS(0.006)GGS(0.017)T(0.017)EPT(0.386)T(0.554)PDS(0.003)ERPAQALLR 113.41 1.9885e-16 58355400.0 3476.92 4088.0 3452.2999999999997 3143.5299999999997 5074.0 3522.47 3658.8500000000004 3648.3 5225.7 5935.9 5478.4 True False 4063.7390934674318 4296.0617387402335 3941.8880518460487 3913.6949911184215 4327.621321487154 3895.2154373736507 4323.615684078474 4165.457697450162 4042.0872937281333 4594.976067338404 4117.96208385187 0.9868325668667354 1.0432494644831143 0.9572424348693553 0.9503960724809829 1.0509133482451039 0.9459085241819745 1.0499406250079504 1.0115337666134763 0.9815746749050285 1.1158373908679469 1.0 12.00771483107453 TNSGISSASGGSTEPTT(ph)PDSERPAQALLR ddPTM_A549_PD325901_60min_R1 2 TNSGISSASGGSTEPTTPDSERPAQALLR 29 1 A2A2F0;Q86X10-2;Q86X10-3;Q86X10;Q86X10-4;A0A0J9YW54 A2A2F0 RALGAPB Ral GTPase-activating protein subunit beta 1 TNSGISSASGGST(0.001)EPT(0.03)T(0.969)PDSERPAQALLR;TNSGISSASGGS(0.001)T(0.006)EPT(0.178)T(0.815)PDSERPAQALLR 182.56 1.0723999999999997e-66 94858000.0 3293.5 5217.2 4399.9 5316.7 5428.4 4786.4 5817.700000000001 5221.5 4773.8 5391.3 5417.2 True False 3627.853695453444 5656.8717537649945 4698.503672748066 5645.100483898214 5047.127910963355 4747.421145325861 6039.095757067595 5117.353086312494 4573.173787336685 5050.892397914986 4750.91874246015 0.7636109755004664 1.1906900665776738 0.9889673824046626 1.1882123837325482 1.0623477656765439 0.9992638061554222 1.2711427166907077 1.0771291541102206 0.9625872458026037 1.0631401359854666 1.0 12.213990816426147 -8.753659152282031 23.950018555626706 0.9823328649544513 1.0774905826161556 0.025530865295287142 0.12880995690936037 164.53415277738034 506486.6276768426 0.019586626471476274 0.021997282931943144 1.7633594424076986e-09 8.753659152282031 0.09515771766170433 TNSMGS(ph)ATGPLPGTK ddPTM_A549_MK2206_60min_R1 1 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 T(0.001)NS(0.396)MGS(0.599)AT(0.004)GPLPGTK 188.47 1.6032e-33 11711000.0 1886.2 1947.7 1908.7 2417.0 3736.4 2925.9 3082.5 3068.6 4632.7 4446.9 4823.1 True False 2204.544446837507 2046.829610700674 2179.3823609068 3009.1651085032513 3186.7805095791496 3235.516795944767 3642.5503494737145 3503.5834471933695 3583.400846901724 3442.3422014938205 3625.391159211803 0.6080845762631577 0.5645817294776202 0.6011440601020884 0.8300249480272563 0.8790170135108919 0.8924600557166366 1.0047330590020092 0.966401498026239 0.9884177153675169 0.9495091840633884 1.0 11.823920946826988 -6.523363995411715 0.9726873349990538 0.9913738847770648 0.5482788239913032 0.9477487830417146 0.03734614124870914 0.07998121867696016 0.1352638851367552 0.005402580151923566 0.02317324276313557 2.9966498827846474e-07 6.523363995411715 -0.44309506078576155 TNSMSSSGLGS(ph)PNR ddPTM_A549_MK2206_60min_R1 7 TNSMSSSGLGSPNR 14 0 F8VQD8;A0A087X050;F8VVY1;F8VX63;F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8 F8VQD8 CNOT2 CCR4-NOT transcription complex subunit 2 1 TNSMSS(0.001)S(0.003)GLGS(0.996)PNR;TNSMSS(0.001)SGLGS(0.999)PNR;TNSMS(0.001)S(0.003)S(0.011)GLGS(0.985)PNR;TNSMSSSGLGS(1)PNR;TNSMSS(0.001)S(0.002)GLGS(0.996)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR 183.23 5.284e-26 348514700.0 35915.21 39801.78999999999 38311.94 34168.81 48738.079999999994 37448.36 35893.97 39861.09 47978.22000000001 55952.100000000006 53513.119999999995 True False 41976.819405419854 41827.53110380958 43745.14918432425 42540.16998389617 41568.77299494416 41411.12059899047 42415.43972992667 45511.52157696837 37111.229775473745 43312.4817495789 40224.33541702231 1.0435677549480635 1.0398563623280852 1.0875294453171247 1.0575729727505663 1.0334234876470552 1.02950415885469 1.0544721072502075 1.1314424739434876 0.9226064120320768 1.0767730852614594 1.0 15.29578096461286 -8.774032662752687 24.999999973672313 0.9634530277284195 1.0578154995645312 0.1373133382789402 0.04679034996882111 117.57003072537078 233397.40200465207 0.006564553153953825 0.00701119841012464 1.6825475139871289e-09 8.774032662752687 0.0943624718361118 TNSMSSSGLGS(ph)PNR ddPTM_A549_PD325901_60min_R1 4 TNSMSSSGLGSPNR 14 0 F8VQD8;A0A087X050;F8VVY1;F8VX63;F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8 F8VQD8 CNOT2 CCR4-NOT transcription complex subunit 2 1 TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR 152.25 8.939199999999999e-14 488632000.0 41102.2 43424.7 44825.4 47517.8 54607.1 48136.7 44837.7 50052.1 48994.0 52218.6 53180.8 True False 45274.86508615958 47084.25186799791 47867.5212010276 50452.86658524623 50771.685680268 47744.69067487204 46544.0232096309 49053.771600387125 46934.95256122449 48921.50868431795 46639.89874086696 0.9707324910310899 1.0095273175784492 1.0263212934269295 1.0817533473982064 1.088589106129012 1.0236877000986504 0.9979443452103369 1.0517555338816607 1.006326210569128 1.0489197019086105 1.0 15.50927703587929 -8.88577802296446 7.666668830295473 1.0027819601176404 1.0325938163847301 0.0 0.035337023082507094 0.35131166708163947 22.40321138389805 0.005967303423191673 0.00633689640749371 1.3008342918852497e-09 8.88577802296446 0.02981185626708971 TNSS(ph)SNDLEVEDR ddPTM_A549_PD325901_60min_R1 2 TNSSSNDLEVEDR 13 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 T(0.001)NS(0.063)S(0.468)S(0.468)NDLEVEDR;T(0.01)NS(0.177)S(0.772)S(0.041)NDLEVEDR 93.478 0.00017551 4679310.0 2025.1 2040.92 1629.1200000000001 2140.85 2674.41 2500.3599999999997 2124.5 2105.57 2232.95 2030.46 2075.93 True False 2230.6866612001727 2212.915491009362 1739.681879894392 2273.0854422768807 2486.568667813628 2479.997897151716 2205.3490100710087 2063.5727545622894 2139.106876792793 1902.2564090795283 1820.603770404506 1.2252455462643328 1.215484405218875 0.9555521680084544 1.2485338541135953 1.3657934297593795 1.3621843135042528 1.2113283768389753 1.1334551691628103 1.1749436706469754 1.044849208818721 1.0 10.830201258227458 -10.134260775518662 0.6032651945815489 0.9967532686134539 1.218822051709956 0.3325425987827112 0.10444007824170123 0.7468171894876896 0.5112681336421914 0.08064261123045573 0.02592720508857569 7.340729559475342e-11 10.134260775518662 0.22206878309650202 TNSSS(ph)SSPVVLK ddPTM_A549_PD325901_60min_R1 1 TNSSSSSPVVLK 12 0 E9PMC9;Q7Z589-6;Q7Z589;Q7Z589-5;Q7Z589-4;Q7Z589-7;Q7Z589-2 E9PMC9 C11orf30;EMSY Protein EMSY 1 T(0.003)NS(0.285)S(0.285)S(0.305)S(0.03)S(0.091)PVVLK 184.51 3.2009e-19 38852000.0 5755.0 6327.9 6120.4 6072.0 7324.5 6729.8 6444.8 6320.6 7633.2 6750.1 8240.5 True False 6339.243363392924 6861.174340766984 6535.7671489550385 6447.053649487459 6810.052388153248 6674.9947400580795 6690.060390729879 6194.530674585224 7312.403149168031 6323.897534020726 7226.970740833428 0.8771646642451842 0.949384546695389 0.9043577708191083 0.8920824340772096 0.9423107734026747 0.9236227707887892 0.9257074133329574 0.8571406882257363 1.0118213303192023 0.8750412532168965 1.0 12.819175338065762 -8.781259177846222 24.997025188369154 1.0055823102194195 0.91175929636441 0.020717140800642242 0.047114318701214124 80.25388606094263 101216.9780645899 0.004207902427625177 0.004482544175292454 1.6547821294403922e-09 8.781259177846222 -0.09382301385500946 TNST(ph)GGSSGSSVGGGSGK ddPTM_A549_MK2206_60min_R1 1 TNSTGGSSGSSVGGGSGK 18 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 TNS(0.328)T(0.671)GGSSGSSVGGGSGK 215.06 1.3016999999999999e-55 58762000.0 2725.6 2867.4 2244.2 1968.2 3094.4 2472.1 1661.2 2567.8 3185.6 3486.1 3048.9 True False 3185.6146454778454 3013.3384123443598 2562.4613057824918 2450.4090883558556 2639.217859126895 2733.6959811528295 1963.0185370789088 2931.7935135576918 2464.066686357876 2698.5875887983984 2291.773984640766 1.390021296527279 1.3148497332369793 1.11811257259915 1.0692193491933524 1.1516047729028527 1.1928296592394274 0.8565497951520777 1.2792681709480391 1.07517874924482 1.1775103508827902 1.0 11.162249056804017 -2.000000000000355 0.39137887752041367 1.0421315730140406 6.655154991227892 0.3762977430703699 0.11314669437015011 33.99137362328139 0.4000447263823555 0.022888206082330765 148.00770875725323 0.00999999999999183 2.000000000000355 5.613023418213851 TNT(ph)PQGVLPSSQLK ddPTM_A549_MK2206_60min_R1 2 TNTPQGVLPSSQLK 14 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61 Q14004 CDK13 Cyclin-dependent kinase 13 1 T(0.002)NT(0.998)PQGVLPSSQLK;T(0.006)NT(0.993)PQGVLPSSQLK 202.33 1.6111e-31 24782000.0 5528.1 6165.4 5541.4 6797.7 9006.1 8520.5 8475.0 7803.2 11063.7 11516.7 12221.9 True False 6461.108130931199 6479.192525447417 6327.253845407317 8463.136805160346 7681.314620308525 9422.133654549853 10014.797797823114 8909.327496297754 8557.789615098454 8915.069471304474 9186.864922719986 0.7032984794358158 0.7052669849780594 0.6887282983512057 0.921221426063445 0.8361192512270326 1.0256092512308552 1.090121372423314 0.9697897564885432 0.9315244849126094 0.9704147765639467 1.0 13.165356901116363 -6.46379009108128 1.3920051644286633 0.9780024248304823 0.6867340615713475 0.8127491291783627 0.058088519239840715 0.14426208536190668 0.5335374915424651 0.009145088453137117 0.031199345895470288 3.437240409799673e-07 6.46379009108128 -0.29126836325913474 TNT(ph)PQGVLPSSQLK ddPTM_A549_PD325901_60min_R1 2 TNTPQGVLPSSQLK 14 0 Q14004;A0A2R8Y4Z0;Q14004-2;A0A2R8Y7W5;A0A2R8YF61 Q14004 CDK13 Cyclin-dependent kinase 13 1 T(0.002)NT(0.998)PQGVLPSSQLK;T(0.002)NT(0.998)PQGVLPSSQLK 226.79 4.883600000000001e-47 44695000.0 20670.5 20124.2 22503.0 21937.0 24421.0 22752.0 22253.0 23455.0 23365.0 24929.0 26053.0 True False 22768.953943182165 21820.136959886055 24030.1889015318 23291.99866745823 22705.753207876354 22566.71525540157 23099.85009230884 22987.171624908446 22383.050303976208 23354.978685590246 22848.646163574198 0.9965121688251675 0.954985989264965 1.0517117176001982 1.0194038850577867 0.9937461084269559 0.987660935962933 1.0109942587817355 1.0060627426387778 0.9796226062470059 1.0221602854887417 1.0 14.479821064265547 -8.737258563272976 24.934907454165888 0.9903773392812557 1.002724545307705 0.0 0.02449671435148322 539.5380725531327 556363.9822190221 0.0038862365585957655 0.004405140953930986 1.831223853116164e-09 8.737258563272976 0.012347206026449231 TNT(ph)PVKEDWNVR ddPTM_A549_MK2206_60min_R1 4 TNTPVKEDWNVR 12 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;A0A494C0Q7 P78347-2 GTF2I General transcription factor II-I 1 T(0.158)NT(0.842)PVKEDWNVR;T(0.176)NT(0.824)PVKEDWNVR;T(0.089)NT(0.911)PVKEDWNVR;T(0.003)NT(0.997)PVKEDWNVR 124.42 2.3674e-05 554201800.0 17585.0 19220.3 13944.5 13307.5 23802.1 19328.8 18615.9 17890.4 28707.5 26383.199999999997 29284.5 True False 20552.918088027556 20198.53117346108 15922.039781875033 16567.838097396383 20300.842620451214 21374.160786580975 21998.168061887347 20426.418987052173 22205.297086457413 20423.216796071818 22012.350438916477 0.9336993859452313 0.9175999278001373 0.723323019323091 0.7526610183392987 0.9222478388568891 0.971007655265781 0.9993557081935214 0.9279526529315799 1.0087653814196877 0.9278071804619661 1.0 14.426025581367817 -7.049281619122805 3.3152238893179216 0.9952263430362466 0.8302767532139962 0.4830205328563637 0.0650625066683562 0.13313775437618233 2.938527462697445 0.009513385854024212 0.017739015019303837 8.927264057834688e-08 7.049281619122805 -0.1649495898222504 TNT(ph)PVKEDWNVR ddPTM_A549_PD325901_60min_R1 3 TNTPVKEDWNVR 12 1 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3;A0A494C0Q7 P78347-2 GTF2I General transcription factor II-I 1 T(0.001)NT(0.999)PVKEDWNVR;T(0.145)NT(0.855)PVKEDWNVR;T(0.01)NT(0.99)PVKEDWNVR 135.86 1.295e-07 435753000.0 25027.399999999998 22318.3 21618.7 23817.9 23251.9 25558.7 22248.600000000002 20621.399999999998 28205.0 26568.1 30912.0 True False 27568.163223801897 24199.14146708066 23085.87498580393 25289.077588624405 21618.766758700312 25350.558421159985 23095.28264790106 20210.08999982465 27019.641935529573 24890.585631859685 27110.019967313026 1.0168994068260098 0.8926272092849042 0.8515624486311308 0.9328313892470695 0.797445622864402 0.9350992161468545 0.8519094665274094 0.7454841429180897 0.9966662498997632 0.9181323238371145 1.0 14.726538555312048 -8.928018734890776 24.99992057581136 0.9985308308052591 0.8773496124361891 0.2271050340181131 0.07240806206992258 30.191192180083043 10485.217657485904 0.01122173862771521 0.011946416407038097 1.1802697192755133e-09 8.928018734890776 -0.12118121836906992 TNTMNGS(ph)KSPVISRPK ddPTM_A549_PD325901_60min_R1 1 TNTMNGSKSPVISRPK 16 2 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 T(0.093)NT(0.192)MNGS(0.354)KS(0.354)PVIS(0.008)RPK 40.431999999999995 0.039867 16813000.0 2080.4 2238.2 2396.3 1987.5 2601.8 2363.6 2336.4 2106.2 2019.2 2272.3 2689.6 True False 2291.6006764904646 2426.820968963583 2558.9273281225005 2110.2633610600005 2419.0585437227282 2344.3516252490813 2425.3129805271383 2064.190188718064 1934.3400459571458 2128.826590206855 2358.7962507791513 0.9715127687410514 1.028838742711229 1.0848445800595292 0.8946357110593779 1.0255479009361963 0.9938762724735981 1.0281994384746098 0.8751032175993269 0.8200538920299707 0.9025055002116723 1.0 11.20383509082508 -8.257494444061319 24.75464167493152 0.9096569924547102 1.004234980111806 0.4139881561834958 0.059358326219013866 322.5534529030476 2024036.6978259163 0.012420667942998962 0.015732702153590912 5.5272047886422225e-09 8.257494444061319 0.0945779876570958 TNTMNGSKS(ph)PVISR ddPTM_A549_MK2206_60min_R1 2 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 TNTMNGS(0.031)KS(0.969)PVISR;TNTMNGS(0.011)KS(0.989)PVISR 97.713 1.1557e-05 151736000.0 9706.599999999999 9748.7 9232.7 9903.7 13626.8 9883.5 10813.400000000001 10314.400000000001 14743.0 14414.5 14817.0 True False 11344.836776414448 10244.867189935641 10542.035691069437 12330.106944593988 11622.315771312798 10929.365409863678 12778.054809083238 11776.497786525222 11403.734039733223 11158.254438694974 11137.529971603599 1.0186133555051615 0.9198509199127721 0.9465326439477656 1.1070773300750705 1.0435272273964888 0.9813096294896032 1.1472970076545108 1.0573706931923634 1.0239015355117644 1.0018607776719088 1.0 13.443141693660346 -6.206941967332133 24.999917222216233 1.0298121643417166 0.9574841009027697 0.3066231915323103 0.05226734905100392 324.28750851917016 148761.8548535356 0.007338308730907052 0.019415301192611503 6.20952003494846e-07 6.206941967332133 -0.07232806343894693 TNTMNGSKS(ph)PVISR ddPTM_A549_PD325901_60min_R1 4 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 TNTMNGS(0.019)KS(0.981)PVISR;TNT(0.004)MNGS(0.052)KS(0.943)PVISR;TNTMNGS(0.017)KS(0.982)PVISR;T(0.005)NT(0.047)MNGS(0.099)KS(0.849)PVISR 89.557 2.0133e-05 402198000.0 24452.7 22180.5 22622.700000000004 21848.2 25947.800000000003 25527.399999999998 23311.6 25650.5 25669.0 24084.699999999997 27539.300000000003 True False 26935.120102873676 24049.72857747153 24158.012463346367 23197.71369313765 24125.316043050436 25319.513317982506 24198.73569459699 25138.880655072022 24590.22119635203 22563.987931679392 24152.1406860062 1.1152270290674458 0.9957597088446074 1.0002431162279362 0.9604827164069334 0.9988893471885368 1.0483341268648987 1.001929228932398 1.0408551764373226 1.0181383719166415 0.934243809897688 1.0 14.559863445223973 -9.449541994913014 0.0023766469098361427 1.652138031287345e-08 2.0218875248917496 0.09665726798014374 0.04282896265610778 91680.29140852341 104.39568289122444 44609.162206634726 44201.37142403734 3.551877712792755e-10 9.449541994913014 2.0218875083703693 TNTMNGSKS(ph)PVISRPK ddPTM_A549_MK2206_60min_R1 2 TNTMNGSKSPVISRPK 16 2 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 T(0.001)NT(0.009)MNGS(0.481)KS(0.504)PVIS(0.004)RPK;TNTMNGS(0.014)KS(0.985)PVIS(0.001)RPK 109.75 1.7314e-07 55048000.0 4234.7 4400.6 4046.7 3299.4 5082.3 4049.5 3538.1 3826.9 6258.4 5791.200000000001 5585.0 True False 4949.4138315251785 4624.571743517679 4620.582909771863 4107.753148115692 4334.700402482098 4478.015402159454 4180.926972091792 4369.374794389724 4840.882392611164 4482.963897836921 4198.090361841542 1.1789679127711914 1.1015893763394498 1.1006392220068817 0.9784813555832508 1.032540995754229 1.0666791365098487 0.9959116197436443 1.0408005587743103 1.153115339443921 1.0678578857150698 1.0 12.035517504931423 -5.392349372638535 1.7235392615030078 1.0581579888766854 1.199122472825979 0.39587252072886736 0.04773850782913411 0.7965664169963814 2.8142736394353762 0.008983631928633542 0.16846578682117636 4.051824511374522e-06 5.392349372638535 0.14096448394929362 TNTMNGSKS(ph)PVISRPK ddPTM_A549_PD325901_60min_R1 6 TNTMNGSKSPVISRPK 16 2 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 TNTMNGS(0.007)KS(0.992)PVIS(0.001)RPK;TNTMNGS(0.031)KS(0.966)PVIS(0.003)RPK;T(0.1)NT(0.086)MNGS(0.181)KS(0.625)PVIS(0.008)RPK;T(0.043)NT(0.204)MNGS(0.158)KS(0.593)PVIS(0.003)RPK;T(0.007)NT(0.006)MNGS(0.024)KS(0.963)PVISRPK;T(0.005)NT(0.004)MNGS(0.062)KS(0.923)PVIS(0.005)RPK 128.41 1.8136000000000003e-10 191969000.0 20182.2 19374.5 21520.5 19017.4 22761.199999999997 23464.9 22173.0 23929.300000000003 23900.2 22606.9 24956.300000000003 True False 22231.082086649625 21007.257109813654 22981.010543279353 20192.061606350915 21162.531833877205 23273.809634162793 23016.805648531168 23452.011339327295 22895.757709184334 21179.496475882323 21886.833311020106 1.0157285784899814 0.9598125416908264 1.0499924871136257 0.922566609770091 0.9669069770464139 1.0633703516371342 1.0516279500763648 1.0715123108978546 1.0460973217928347 0.9676820842427837 1.0 14.417775613329518 -7.24917061587503 24.881116243547968 1.0315088313486878 0.9820774002312309 0.27359203435258006 0.040801024996015 743.6767344894374 1508179.442439455 0.00564921997293458 0.009739574230480037 5.634162699952566e-08 7.24917061587503 -0.04943143111745685 TNTNVNCPIECFMPLDVQADREDS(ph)RE ddPTM_A549_MK2206_60min_R1 4 TNTNVNCPIECFMPLDVQADREDSRE 26 2 H0Y7Z1;P02751-12;P02751-10;P02751-6;P02751-5;P02751-9;P02751-14;P02751-13;P02751-8;P02751-17;P02751-3;P02751-11;P02751-1;P02751-7;P02751 H0Y7Z1 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 1 TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE 64.686 0.00018254 28727300.0 3425.28 3890.1699999999996 2807.8999999999996 3108.53 4643.58 4296.389999999999 3321.4799999999996 2794.8599999999997 5634.11 5004.51 5586.14 True False 4003.383523944212 4088.1630367404846 3206.102442075866 3870.119989547217 3960.5155333132293 4751.031138087134 3924.9499220664875 3191.039963899779 4357.993080824889 3873.987715216855 4198.947268379139 0.9534255297970393 0.9736161888783569 0.7635491081824118 0.9216881618618529 0.9432163064153105 1.131481496294453 0.9347461806972348 0.7599619047208401 1.037877544603494 0.9226092798046203 1.0 12.035811955158046 -8.1985688523349 0.43281380625408505 1.0193716449972388 0.9085572476605309 0.0 0.10520001200111675 1.654602738383441 0.7308672231819907 0.0420623791754137 0.06331901867807069 6.330399926326324e-09 8.1985688523349 -0.11081439733670784 TNTNVNCPIECFMPLDVQADREDS(ph)RE ddPTM_A549_PD325901_60min_R1 5 TNTNVNCPIECFMPLDVQADREDSRE 26 2 H0Y7Z1;P02751-12;P02751-10;P02751-6;P02751-5;P02751-9;P02751-14;P02751-13;P02751-8;P02751-17;P02751-3;P02751-11;P02751-1;P02751-7;P02751 H0Y7Z1 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 1 TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE 74.14399999999999 2.4558000000000003e-06 79097500.0 6532.53 7888.09 9167.13 8497.98 9870.84 10588.7 8182.86 8970.98 7614.48 8650.74 8775.849999999999 True False 7195.707636605585 8552.847027554266 9789.26656823087 9022.88092428713 9177.546250949355 10502.4691378723 8494.2632151328 8792.046766302332 7294.469885667478 8104.530800055478 7696.476084696682 0.9349353596918463 1.111267927481819 1.2719154143407783 1.1723392400618005 1.1924348429013591 1.3645815334572307 1.1036561566172343 1.1423470520208634 0.9477674984492533 1.0530183828116029 1.0 12.909982328025142 -8.688518830039996 4.764409926332961 0.9752951531682433 1.1720010730338293 0.3131621377282715 0.10437271845457986 0.14435565868236558 6.156604254370172 0.017499961797265075 0.019705913577042034 2.0487132203964262e-09 8.688518830039996 0.19670591986558594 TNVQQTTDLEIPPPGT(ph)PHSELLEEVECTPSPR ddPTM_A549_PD325901_60min_R1 1 TNVQQTTDLEIPPPGTPHSELLEEVECTPSPR 32 0 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 TNVQQTTDLEIPPPGT(0.959)PHS(0.041)ELLEEVECTPSPR 91.50399999999999 3.6354000000000005e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TNYNDRYDEIR ddPTM_A549_MK2206_60min_R1 2 TNYNDRYDEIR 11 1 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ; 116.01 2.0187000000000002e-05 10768500.0 2684.3 3236.2 2891.9 2589.1000000000004 3872.8 3042.5 2776.1 2811.4 4520.7 4328.7 4354.3 False True 3137.344215165901 3400.9087570721995 3302.0149051744006 3223.429616229116 3303.1162502671364 3364.4553305519526 3280.481435579557 3209.9245595514053 3496.7686680744746 3350.8436635872845 3273.007137433594 0.9585509848982279 1.03907770874551 1.008862726698345 0.9848526082826229 1.0091992200350506 1.0279401141758782 1.0022836180405716 0.9807264160347501 1.0683657325649265 1.0237813493479648 1.0 11.676401033127508 -8.74410336625481 24.99801816737047 1.032283825305603 1.0035565444284833 0.20170664921091674 0.02563897223924954 332.48730016900123 479437.12014076085 0.0051661566767476266 0.005851694456594508 1.802588656398016e-09 8.74410336625481 -0.028727280877119732 TNYNDRYDEIRR ddPTM_A549_MK2206_60min_R1 4 TNYNDRYDEIRR 12 2 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ;;; 119.25 5.9192e-06 66025000.0 4891.46 6092.1 5365.9 4694.17 7489.8 4466.620000000001 4167.110000000001 3909.54 7609.9 7398.5 7577.999999999999 False True 5717.018863284804 6402.161868537031 6126.865306433592 5844.241860729296 6388.060341678067 4939.274763697605 4924.219947054472 4463.7292674641085 5886.269800513185 5727.17371151859 5696.173457839785 1.00365954541225 1.123940820258129 1.0756107326754656 1.0259943634064936 1.1214652062405193 0.8671215510299388 0.8644785808404667 0.7836364711331897 1.033372639383333 1.0054422945347876 1.0 12.475777364069454 -7.237485428521082 24.910439720981405 0.9748860821024633 1.0709754366383104 0.35412466663278186 0.08382626339097451 1003.486484417002 1043556.4930874865 0.014181368098800677 0.02455388403355533 5.7878140733771945e-08 7.237485428521082 0.0960893545358471 TNYNDRYDEIRR ddPTM_A549_PD325901_60min_R1 2 TNYNDRYDEIRR 12 2 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ; 183.89 1.1339e-19 76469000.0 5241.7 5585.8 5388.0 6519.1 7314.1 7969.5 7237.799999999999 7912.200000000001 7929.6 7112.9 7498.1 False True 5773.833525264406 6056.534969366804 5753.662080676056 6921.77000104969 6800.382848275195 7904.599034279302 7513.238439676133 7754.384963999179 7596.346487926797 6663.790280104895 6575.881234372083 0.8780319046950879 0.9210225600957238 0.874964415507036 1.0525996067066494 1.034140156414268 1.2020592757913602 1.1425447285155472 1.1792160909882412 1.155183041965653 1.0133684053284466 1.0 12.682968527700888 -6.401909862851936 2.3138936578526557 1.096206250018029 0.8907428713202079 0.670599427669341 0.06464196304914892 0.1737988951605368 1.802770374658266 0.011310410447112956 0.031134388381590782 3.963602896842861e-07 6.401909862851936 -0.20546337869782105 TPAAAAAMNLAS(ph)PR ddPTM_A549_MK2206_60min_R1 5 TPAAAAAMNLASPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR 140.49 6.9905e-11 81914000.0 29438.199999999997 35805.3 31526.100000000002 30585.899999999998 43801.200000000004 35393.0 35585.200000000004 36028.600000000006 49936.1 49142.0 53189.9 True False 34406.648465110746 37627.63683319856 35996.97503441289 38079.44687305321 37358.101503098784 39138.263768028046 42050.5702177103 41135.76438295999 38625.65308156566 38040.78806939875 39981.37986344054 0.8605668084150493 0.9411290196015902 0.9003434888281323 0.9524295310246038 0.9343874981478437 0.9789122812095975 1.051753850450816 1.0288730534929595 0.9660910457191455 0.9514626108285901 1.0 15.287040643722781 -6.767182054286106 1.208921053098303 0.9923215262028798 0.9023523519871006 0.5952570484108887 0.033080979600717 0.2636738376253069 0.7572387247497516 0.0051790393242357015 0.014991364064978136 1.7092986346155054e-07 6.767182054286106 -0.08996917421577921 TPAAAAAMNLAS(ph)PR ddPTM_A549_PD325901_60min_R1 6 TPAAAAAMNLASPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR 111.01 3.0733e-06 132520400.0 41926.21 42480.82 45930.93 47268.59 53531.479999999996 47136.25 47458.590000000004 48040.060000000005 52086.310000000005 49715.02 63825.51 True False 46182.527974755496 46060.82778785076 49048.079114919514 50188.263449543214 49771.61351838048 46752.38800797386 49264.652612786915 47081.86331660198 49897.30352572218 46576.00515278162 55975.37689324327 0.8250507730003358 0.8228765993965235 0.8762438385803893 0.8966132295145186 0.8891697792996612 0.835231321392269 0.880112923701164 0.84111739714405 0.8914152310378678 0.8320802420251995 1.0 15.772504716610037 -10.30149554243384 0.47092264757675306 1.0195021729758695 0.8547721753243347 0.0 0.05570363454970283 0.4362071262189584 0.1589850029600334 0.03229424415250185 0.007388551845337669 4.994643066463194e-11 10.30149554243384 -0.16472999765153484 TPAAPAS(ph)PAAVPSEGSGGSTTGWR ddPTM_A549_MK2206_60min_R1 2 TPAAPASPAAVPSEGSGGSTTGWR 24 0 P07199 P07199 CENPB Major centromere autoantigen B 1 TPAAPAS(1)PAAVPSEGSGGSTTGWR;TPAAPAS(1)PAAVPSEGSGGSTTGWR 190.57 1.1649e-50 81796000.0 2594.8 1756.8200000000002 1421.48 1254.1999999999998 3980.5 2689.0 2245.3999999999996 2090.56 3570.3 3618.9 4231.0 True False 3032.7388032308163 1846.234634015073 1623.0672386345686 1561.4790563031781 3394.973722936465 2973.548195186261 2653.3601150716227 2386.90328207149 2761.6327505975414 2801.3879765647953 3180.325930340475 0.9535937100969212 0.5805174294879334 0.5103461953853291 0.4909808272814388 1.0674923882952494 0.9349822189035584 0.834304462243454 0.7505215925513509 0.8683489714847843 0.8808493336608704 1.0 11.634958909917096 -6.7596016584262335 24.99999984416726 0.9213844575524441 0.6212270029532755 0.4679122001218423 0.13827818819062232 31.006308558219718 421792.0043382724 0.02025635498860331 0.04052914371973537 1.7393954975945272e-07 6.7596016584262335 -0.30015745459916865 TPAAPAS(ph)PAAVPSEGSGGSTTGWR ddPTM_A549_PD325901_60min_R1 2 TPAAPASPAAVPSEGSGGSTTGWR 24 0 P07199 P07199 CENPB Major centromere autoantigen B 1 TPAAPAS(1)PAAVPSEGSGGSTTGWR;TPAAPAS(1)PAAVPSEGSGGSTTGWR 285.27 2.7986999999999993e-140 173787000.0 8762.0 6738.3 5808.799999999999 6889.6 7120.700000000001 7181.0 5355.6 5051.7 10031.3 8668.3 10264.0 True False 9651.511789756523 7306.160189065903 6203.020099152017 7315.154944583136 6620.566597081412 7122.520316852961 5559.410288696771 4950.939880518015 9609.719345785425 8120.982058658667 9001.593068856775 1.0722004111859158 0.8116519079654202 0.6891024790503906 0.8126511483719158 0.7354883237264845 0.7912510888206079 0.6176029338552215 0.5500070757082999 1.0675576281083636 0.9021716485668744 1.0 13.135964631565956 -8.786676454363612 24.99891946553961 1.0319022643738838 0.7565871029385545 0.3628127238123753 0.13249326374741466 134.68478290809196 133413.16524724432 0.02212437385075784 0.02355756354919545 1.6342690107791002e-09 8.786676454363612 -0.2753151614353293 TPADTGFAFPDWAYKPES(ph)SPGSR ddPTM_A549_MK2206_60min_R1 2 TPADTGFAFPDWAYKPESSPGSR 23 1 P50548 P50548 ERF ETS domain-containing transcription factor ERF 1 TPADTGFAFPDWAYKPES(0.504)S(0.385)PGS(0.112)R;TPADTGFAFPDWAYKPES(0.489)S(0.489)PGS(0.021)R 100.93 1.3644e-10 126826000.0 4599.4 5902.3 6043.6 4985.4 7382.8 6398.700000000001 5461.9 5863.8 8215.6 7706.1 8636.2 True False 5375.666275466246 6202.701859238375 6900.673356932126 6206.823223803108 6296.799899936021 7075.806186886697 6454.256530021244 6695.011607134353 6354.779717617328 5965.286657881111 6491.593193005533 0.8280966036593821 0.955497622050866 1.0630169130695624 0.9561324992593104 0.9699929913538952 1.0899953180231061 0.9942484592188373 1.0313356687766566 0.9789245149348519 0.918924904953764 1.0 12.664356878383055 -5.322246192371264 3.4197160330309893 0.9998191143544578 0.8165294180838282 0.5385485257990597 0.045936566629022485 0.12093861251574245 2.3438515241558675 0.005084257656732457 0.05175488577155877 4.761609846757575e-06 5.322246192371264 -0.18328969627062963 TPADTGFAFPDWAYKPES(ph)SPGSR ddPTM_A549_PD325901_60min_R1 2 TPADTGFAFPDWAYKPESSPGSR 23 1 P50548 P50548 ERF ETS domain-containing transcription factor ERF 1 TPADTGFAFPDWAYKPES(0.563)S(0.435)PGS(0.002)R;TPADTGFAFPDWAYKPES(0.548)S(0.395)PGS(0.057)R 115.63 1.0207e-15 97452000.0 2659.9 2462.8 3333.2 2777.8 3747.6 3375.4 3370.3 5688.5 7668.3 7459.2 8942.0 True False 2929.9310898851127 2670.348799197353 3559.4109961598806 2949.3783971584753 3484.3815045181386 3347.9118615103052 3498.5586107989243 5575.03840495808 7346.028018231568 6988.224839004962 7842.190688008311 0.3736113040920241 0.3405105671914673 0.45387967951387165 0.3760911350534288 0.44431226466428486 0.4269102849832102 0.4461200638934549 0.7109031936041813 0.9367316239153127 0.8911062121571247 1.0 12.937041007018916 -8.484445430164648 1.7093069024391008 0.9771364146583394 0.39968374530939255 0.9697962682224344 0.041748006955396266 0.02935641428636545 0.167270010442454 0.006354457984522374 0.007568236877859926 3.2775895768464614e-09 8.484445430164648 -0.5774526693489469 down TPADTGFAFPDWAYKPESSPGSR ddPTM_A549_MK2206_60min_R1 2 TPADTGFAFPDWAYKPESSPGSR 23 1 P50548 P50548 ERF ETS domain-containing transcription factor ERF 0 ; 170.28 2.4363e-40 16090000.0 3868.4 4370.7 4046.1000000000004 3898.3999999999996 6920.700000000001 5006.9 4549.2 4304.7 7318.8 7145.7 7479.8 False True 4521.291346700357 4593.149961230906 4619.897820749729 4853.508175005824 5902.674197795856 5536.726834688766 5375.730754201404 4914.904407590852 5661.103485722004 5531.481407095816 5622.359228021904 0.8041626590073058 0.8169435240527844 0.8217009325416464 0.8632511688004358 1.0498571788826405 0.9847693130480982 0.9561343443529363 0.8741711812178261 1.0068911032057501 0.9838363545905869 1.0 12.456959919086316 -6.613303093514276 5.01505102929859 0.9908435773659241 0.8185218632596983 0.7579891622700151 0.04175694175612397 0.07453116876513234 3.1657283534186877 0.006402751688232566 0.013599452873705353 2.436110067137634e-07 6.613303093514276 -0.17232171410622577 TPAKS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 TPAKSPGK 8 1 Q5SSJ5;Q5SSJ5-2;Q5SSJ5-3 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 T(0.113)PAKS(0.887)PGK 42.802 0.021072 5214300.0 3323.9 3189.2 1981.8 1929.5 3730.3 3180.0 3184.8 3084.2 3470.7 4461.7 4362.4 True False 3884.893058447242 3351.516657825428 2262.8490401032645 2402.2275866185473 3181.577811498528 3516.505489286841 3763.4369352810663 3521.3947949663657 2684.591991569021 3453.798871214775 3279.0956838849656 1.1847452569131949 1.0220856543761054 0.6900832602183523 0.732588438460102 0.9702607420498014 1.0724009996318864 1.1477057390476233 1.0738920526998261 0.8186988884656162 1.0532778559004496 1.0 11.679082284792656 -5.408401019541593 4.349833857687616 0.9280786789278141 1.1739559637834045 0.16817223966526673 0.14190741602752024 0.27272505975773276 7.8727860462991375 0.020600289530224573 0.13841476175403578 3.904801670642498e-06 5.408401019541593 0.24587728485559035 TPALIALR ddPTM_A549_MK2206_60min_R1 2 TPALIALR 8 0 S4R3Z2;A0A0A0MSS8;P42330;B4DK69;P52895;Q04828;H0Y804;P42330-2 S4R3Z2;B4DK69;Q04828;P42330-2 AKR1C3;AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 81.78399999999999 0.010131999999999999 54088000.0 3653.1000000000004 3194.5 3214.7 3120.5 4002.6000000000004 3307.3 3462.3 3035.1 4879.200000000001 4619.1 4101.3 False True 4269.653970279977 3357.0864051873 3670.592799081624 3885.022640084569 3413.822842212157 3657.27629079194 4091.355093262887 3465.3347196039217 3774.068990481336 3575.6421018957267 3082.8340198783703 1.3849769214783842 1.0889611258798 1.1906553435615852 1.2602114207361212 1.1073651128148785 1.1863357764996487 1.3271408927245154 1.124074373533948 1.2242206249658028 1.1598555351471045 1.0 11.590041501338934 -10.767274000924884 0.6983261407638252 0.9775083605862984 1.2080488374457934 0.137214043276775 0.0975049607198716 0.6430916481690832 0.4673825883025269 0.0891345269138083 0.015605540684971855 1.7089367888292266e-11 10.767274000924884 0.23054047685949497 TPALIALR ddPTM_A549_PD325901_60min_R1 1 TPALIALR 8 0 S4R3Z2;A0A0A0MSS8;P42330;B4DK69;P52895;Q04828;H0Y804;P42330-2 S4R3Z2;B4DK69;Q04828;P42330-2 AKR1C3;AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 79.116 0.011508 38563000.0 2017.8 1765.8 2495.9 2061.1 2394.7 2223.7 2114.4 2153.7 2635.9 2472.9 2308.2 False True 2222.645570574149 1914.61016307564 2665.286783065958 2188.409465902271 2226.5045332665136 2205.5909244653863 2194.8646490440747 2110.7427639550338 2525.122289589167 2316.7606719722467 2024.3060328853499 1.0979790281048047 0.9458106294069802 1.31664221702041 1.0810665138328992 1.0998853419870314 1.089554093420174 1.0842553514083138 1.0426994385559782 1.24740145440854 1.1444715543677186 1.0 10.983211696606684 TPAPDPGS(ph)PRTPPPTSR ddPTM_A549_MK2206_60min_R1 1 TPAPDPGSPRTPPPTSR 17 1 Q96LL9 Q96LL9 DNAJC30 DnaJ homolog subfamily C member 30 1 T(0.026)PAPDPGS(0.51)PRT(0.123)PPPT(0.171)S(0.171)R 40.996 0.026498 11026000.0 1356.2 1347.8 1052.3 1579.9 1344.9 1286.6 1372.4 1283.9 2023.2 2185.9 1933.6 True False 1585.0934040934287 1416.397263080746 1201.5319633165118 1966.9755709244062 1147.0669915782566 1422.7471580240392 1621.7473153666583 1465.8967567788459 1564.948430386507 1692.1036718265184 1453.4337553548435 1.0905852421918203 0.9745179357933272 0.8266850545404927 1.3533300459532713 0.7892117458756901 0.9788868276811746 1.1158040807788467 1.0085748671916317 1.0767249794638478 1.1642110729796595 1.0 10.505249602438965 TPAPDPGSPRT(ph)PPPTSR ddPTM_A549_MK2206_60min_R1 1 TPAPDPGSPRTPPPTSR 17 1 Q96LL9 Q96LL9 DNAJC30 DnaJ homolog subfamily C member 30 1 T(0.002)PAPDPGS(0.134)PRT(0.595)PPPT(0.12)S(0.148)R 47.75 0.0093461 12209000.0 963.46 1207.4 975.58 828.12 1285.1 1344.9 775.84 1143.5 1645.4 1489.7 1661.9 True False 1126.068493664545 1268.8515027776318 1113.9319136865176 1031.0094371757189 1096.0634923616763 1487.2164253276317 916.8000853643749 1305.5946268218784 1272.7195271638775 1153.1757353584171 1249.2043638933667 0.9014285622209589 1.0157277219421739 0.8917131142695912 0.8253328814529556 0.877409272687457 1.1905309237733195 0.7339072067495866 1.0451409429540908 1.0188241123311654 0.9231281675676674 1.0 10.28679379896376 TPAPPEPGS(ph)PAPGEGPSGR ddPTM_A549_MK2206_60min_R1 2 TPAPPEPGSPAPGEGPSGR 19 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 TPAPPEPGS(1)PAPGEGPSGR;TPAPPEPGS(1)PAPGEGPSGR 210.57 4.0105999999999997e-66 71928000.0 4426.9 5370.3 4345.6 4855.6 6802.299999999999 4571.9 4376.5 4947.9 6822.3 6300.0 7557.1 True False 5174.052492686333 5643.6253315941 4961.871424297476 6045.2222179761675 5801.690680952324 5055.695423418394 5171.653399666415 5649.279977308244 5277.059942974428 4876.825624459975 5680.463504650439 0.9108504065646189 0.9935149353523387 0.8734976327610111 1.0642128433757405 1.0213410712352329 0.8900145946328913 0.9104280654972124 0.9945103903375727 0.9289840412942085 0.8585260024058692 1.0 12.4717929377333 -11.0247717292204 1.3029768592672808 1.0000970312874256 0.9531364335375389 0.0 0.07021691599519374 0.9557976404480457 2.880732764784401 0.03962425441096928 0.008851640911120494 9.44557217285664e-12 11.0247717292204 -0.0469605977498867 TPAPPEPGS(ph)PAPGEGPSGR ddPTM_A549_PD325901_60min_R1 2 TPAPPEPGSPAPGEGPSGR 19 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 TPAPPEPGS(1)PAPGEGPSGR;TPAPPEPGS(1)PAPGEGPSGR 247.79 1.6653999999999997e-86 93156000.0 9943.1 11527.7 10716.4 11194.6 12854.4 11615.8 11566.099999999999 11300.2 11708.1 11143.6 13255.7 True False 10952.516192276653 12499.179735466674 11443.6793469482 11886.065017218763 11951.551289272586 11521.204776006216 12006.254264712776 11074.8086461646 11216.0492730145 10439.991194221326 11625.332934805614 0.9421249484808659 1.0751674644985703 0.9843743324276285 1.022427923903369 1.0280609902784197 0.9910429955526139 1.0327664878110032 0.9526444281872759 0.9647938115762912 0.8980380392345203 1.0 13.504984413319796 -8.25274805200609 24.97812894595623 0.9806055471518353 1.012652658372393 0.21976801878769747 0.04168258084406583 776.8287562287109 2232543.163519725 0.0050343066616296474 0.006451877809944304 5.5879427499302746e-09 8.25274805200609 0.03204711122055759 TPAQFDADELR ddPTM_A549_MK2206_60min_R1 2 TPAQFDADELR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 158.56 7.7049e-13 29993000.0 7629.8 8025.9 7331.299999999999 5767.0 10082.0 7643.0 6600.1 7558.5 9803.099999999999 9898.0 11431.7 False True 8917.523709299548 8434.384028609407 8370.988579931909 7179.915258890466 8598.951155544642 8451.777186987209 7799.25273692181 8629.94052193544 7582.713502333901 7662.03492554045 8592.893391130521 1.0377789300288662 0.9815534354604323 0.9741757751320808 0.8355643357918866 1.000704973765923 0.9835775683788919 0.9076398812269802 1.0043113686064298 0.8824400766057082 0.8916711259852366 1.0 13.068928280772791 -5.450418180077372 2.0688340745661296 0.9454898520310846 1.0440537375868209 0.22165958374025563 0.053906317472888585 0.6184422010087615 3.8105033182202264 0.007879871547344252 0.09778632295632203 3.544719055526923e-06 5.450418180077372 0.09856388555573625 TPAQFDADELR ddPTM_A549_PD325901_60min_R1 1 TPAQFDADELR 11 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 194.17 5.7691e-20 30939000.0 4415.8 5562.6 4520.9 4408.3 5448.9 4545.3 4526.6 5814.8 5054.1 5347.1 5758.4 False True 4864.088765259855 6031.3798239463995 4827.715460380174 4680.5906790243025 5066.188061684515 4508.284583789413 4698.8622400505665 5698.819252377645 4841.693753106188 5009.4831934582035 5050.153305505154 0.963156655057883 1.1942963825220145 0.9559542390757719 0.9268215034030763 1.003175102855171 0.8927025203125909 0.9304395244651986 1.1284448030845682 0.9587221338069628 0.991946756942484 1.0 12.30211146851364 -5.818642996760919 24.99999026678995 0.9775198598412882 1.0787321366521345 0.21174472481172024 0.07607545922136001 73.7462064280878 32229.380835126907 0.009566513771320199 0.0297435357118248 1.5182979415849614e-06 5.818642996760919 0.10121227681084632 TPAQYDASELK ddPTM_A549_MK2206_60min_R1 2 TPAQYDASELK 11 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 153.95 1.5294e-12 50037000.0 8977.4 10360.9 9835.4 7824.6 12311.9 9114.8 9326.5 8171.9 13385.5 13720.7 13376.8 False True 10492.565643642798 10888.22555501803 11230.207613801416 9741.627351259647 10500.835819475311 10079.322086085429 11021.004325828577 9330.291850394155 10353.70562225118 10621.184340559992 10054.971379101504 1.0435201899679993 1.0828698704850004 1.1168811118789013 0.9688369050464809 1.0443426861761638 1.0024217579608965 1.0960751562888482 0.9279282355578315 1.0297101037771796 1.0563117427301005 1.0 13.29562135464999 -6.257101680095385 24.99407689884166 1.0129350701858582 1.081268337804422 0.29443979492235484 0.04493031579824841 304.47434095025193 1754390.7981600363 0.005467290338909564 0.013919495051122024 5.532205701398314e-07 6.257101680095385 0.06833326761856395 TPAQYDASELK ddPTM_A549_PD325901_60min_R1 2 TPAQYDASELK 11 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 152.85 9.027e-12 92860000.0 23757.7 24381.3 23697.9 24831.7 28449.9 26343.5 25165.5 26924.5 27593.9 27547.6 30059.6 False True 26169.564214505644 26435.99771717978 25306.182001049212 26365.497712117554 26451.67717082681 26128.967270159577 26123.18687359001 26387.469725638348 26434.224343372072 25808.239834697164 26362.459763504226 0.9926829457217181 1.0027894951508796 0.9599325035701977 1.0001152376766274 1.0033842595919709 0.9911429928982616 0.990923726690881 1.0009486960761054 1.0027222262456403 0.9789769265167617 1.0 14.686197367613472 -7.47776710681971 0.6745966696535143 1.0013255644731665 0.9886390684990665 0.0 0.012989002758314409 0.9759292042871681 0.8787448468581303 0.002241146674551795 0.005354220512984986 3.3283799193705484e-08 7.47776710681971 -0.012686495974099987 TPARPFGS(ph)VGR ddPTM_A549_MK2206_60min_R1 4 TPARPFGSVGR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 T(0.001)PARPFGS(0.999)VGR;T(0.002)PARPFGS(0.998)VGR;T(0.014)PARPFGS(0.986)VGR;T(0.013)PARPFGS(0.987)VGR 73.887 0.00040643 56913700.0 4337.030000000001 4382.42 3591.5 2933.3500000000004 5313.76 4272.62 4259.25 4226.37 6193.0199999999995 5847.200000000001 6510.700000000001 True False 5069.014633796877 4605.466459170736 4100.8287049807595 3652.020881683086 4532.112943095307 4724.745812464383 5033.100592374995 4825.470890215292 4790.310858220759 4526.313458943231 4893.9135038212535 1.0357793675427451 0.9410600443948809 0.8379446636681994 0.7462373167877863 0.9260713209492881 0.9654330442855638 1.028440855860052 0.9860147480022847 0.97883030717245 0.9248862807667129 1.0 12.256772887773119 -7.225754675948665 3.4552403364674635 0.991673854226522 0.8857693138217647 0.25575743751577473 0.07035767227081219 0.2179472051409747 5.420832688824484 0.010331022825832549 0.01809057154806875 5.946279569089563e-08 7.225754675948665 -0.10590454040475727 TPARPFGS(ph)VGR ddPTM_A549_PD325901_60min_R1 2 TPARPFGSVGR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 T(0.224)PARPFGS(0.776)VGR;T(0.033)PARPFGS(0.967)VGR 63.211999999999996 0.0019107 108677000.0 4460.299999999999 4230.7 3890.6000000000004 4076.5 4934.8 4298.2 3851.3 4274.9 4634.3 4760.2 4901.299999999999 True False 4913.106372500684 4587.235936642943 4154.639512078371 4328.296146596775 4588.196672135797 4263.196884263667 3997.8633290122234 4189.6337659058245 4439.536487212366 4459.640159619184 4298.471171900597 1.142989257347589 1.067178481184199 0.9665388799714504 1.0069385075538357 1.0674019875087577 0.9917937596353976 0.9300663350138375 0.9746799730317489 1.0328175552819623 1.0374944907789911 1.0 12.069607915428628 -5.464643293966488 3.4074559607868995 1.0062707108858842 1.1392844480393645 0.5833645136304868 0.036114683965696046 0.14216915759988522 3.0042143469545506 0.005096423073744903 0.03640385548770285 3.4304943314408276e-06 5.464643293966488 0.1330137371534803 TPART(ph)PDR ddPTM_A549_MK2206_60min_R1 1 TPARTPDR 8 1 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 T(0.142)PART(0.858)PDR 49.5 0.013168000000000001 27363000.0 1604.9 2002.8 2017.4 1677.2 2457.4 1372.7 2187.5 1711.5 2420.8 2738.8 2746.3 True False 1875.7678839622072 2104.733965349546 2303.49765541645 2088.1140752923693 2095.919715298095 1517.9582028754849 2584.9404345413645 1954.1103662489265 1872.4926652232364 2120.103177820791 2064.3179159759025 0.9086623089619611 1.0195784036271065 1.1158638103121223 1.0115273714054926 1.0153085913161068 0.7353316033000048 1.252200746084858 0.9466130924534095 0.9070757225579854 1.0270235807252182 1.0 11.01144945526934 -7.040339709483631 24.99941669657091 0.9615850819295083 1.0205736967855616 0.010488645227135884 0.12295181085190184 1302.8632173073622 807412.0626926265 0.017073727613734546 0.029575410739311612 9.112977342989898e-08 7.040339709483631 0.058988614856053334 TPART(ph)PDR ddPTM_A549_PD325901_60min_R1 1 TPARTPDR 8 1 Q9H2D6-2;F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6 Q9H2D6-2 TRIOBP TRIO and F-actin-binding protein 1 T(0.009)PART(0.991)PDR 60.167 0.0045267 29909000.0 1591.7 1682.3 1341.7 1769.7 1883.6 1582.0 1596.2 1512.2 1624.5 1503.0 1892.9 True False 1753.288212252391 1824.0733250323644 1432.7558302975249 1879.0103497196894 1751.3024340672348 1569.116716510428 1656.9442644741546 1482.0379847020502 1556.227914350923 1408.1003234964148 1660.0853000817422 1.0561434476686586 1.0987828908204582 0.8630615729366294 1.1318757835077315 1.0549472572168437 0.9452024642547977 0.9981079071012599 0.8927480922992782 0.9374385245591264 0.8482096211725267 1.0 10.697041658067551 -7.259954355449284 24.942625543359682 0.9640192671155905 1.0393418401824588 0.27637836960621287 0.07728638437776048 154.39300243568084 2593199.704920699 0.009989490089756222 0.01673293110226601 5.495986338926354e-08 7.259954355449284 0.07532257306686829 TPAS(ph)PHFR ddPTM_A549_PD325901_60min_R1 1 TPASPHFR 8 0 P29590-2 P29590-2 PML Protein PML 1 T(0.001)PAS(0.999)PHFR 94.309 0.00078027 13055000.0 1823.9 1746.2 1801.4 1417.0 2162.3 1873.1 1998.5 2056.5 2014.6 1475.7 2345.9 True False 2009.0609853157866 1893.3584022894333 1923.6538366981913 1504.5248717595066 2010.4275075300375 1857.8460946243247 2074.5540111211626 2015.4814942069602 1929.9333679602166 1382.524050155463 2057.3691718853393 0.9765194369441806 0.9202813127380493 0.9350066400262946 0.7312858053476056 0.977183645503794 0.9030202843575347 1.0083528223668654 0.9796401743300188 0.9380588541587106 0.6719863741753945 1.0 11.006584977241793 -7.4606838444384 2.1302811904963392 0.9728338940679768 0.8990304798016258 0.0 0.11152590371189873 0.3799024586521814 3.4102697255726557 0.010036658422463922 0.0168985175790349 3.461913047606198e-08 7.4606838444384 -0.07380341426635106 TPAS(ph)PVVHIR ddPTM_A549_MK2206_60min_R1 1 TPASPVVHIR 10 0 P14866;M0QXS5;A0A3B3ITJ4;M0QYL7;M0R1W6 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 T(0.018)PAS(0.982)PVVHIR 78.692 0.00040365 4030800.0 276.17 306.98 227.29 266.9 533.14 390.91 276.54 266.23 405.75 451.18 474.05 True False 322.78074429175825 322.6039707824063 259.5231397341157 332.2905119815962 454.7158122462876 432.2758367349431 326.78373840826004 303.96891779518063 313.84827284960704 349.2581246418813 356.33030188558314 0.9058470261544089 0.9053509316364391 0.7283218361189164 0.9325350951721584 1.2761076165571117 1.2131324067795555 0.9170809686378835 0.8530537992044931 0.8807790726436255 0.9801527481488995 1.0 8.477071363454229 -6.512323826473637 24.960859035708964 0.9782232802068377 0.848730588985243 0.20971786858914832 0.13289192367254454 796.2227475539949 1882949.8114136043 0.021057284984516027 0.04618876192356149 3.0738040149359565e-07 6.512323826473637 -0.12949269122159468 TPAS(ph)PVVHIR ddPTM_A549_PD325901_60min_R1 2 TPASPVVHIR 10 0 P14866;M0QXS5;A0A3B3ITJ4;M0QYL7;M0R1W6 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 T(0.178)PAS(0.822)PVVHIR;T(0.047)PAS(0.953)PVVHIR 84.289 0.00028148 13006600.0 859.5999999999999 832.63 750.89 965.27 1053.7 1051.67 927.2 931.27 833.46 1112.9 1072.94 True False 946.8659591959256 902.7986522152391 801.8499108683822 1024.8925356127738 979.6917470676598 1043.1055482000777 962.4851033833087 912.695089282818 798.4325746352234 1042.631304071298 940.9751819270458 1.006260289731357 0.9594287602425134 0.8521477784634599 1.0891812614163443 1.0411451501423505 1.1085367268283066 1.0228591804219662 0.9699459739349211 0.848516082007704 1.1080327346530736 1.0 9.878012862374716 -8.523875677947578 24.995933834040322 0.9274535629896666 1.0100686567038488 0.0 0.08980026636021261 45.99626048701078 1153234.647108711 0.014289320502078854 0.01626823055819643 2.993121331194447e-09 8.523875677947578 0.08261509371418219 TPASINAT(ph)PANINLADLTR ddPTM_A549_MK2206_60min_R1 2 TPASINATPANINLADLTR 19 0 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 TPAS(0.001)INAT(0.843)PANINLADLT(0.156)R;TPASINAT(0.993)PANINLADLT(0.006)R 56.407 0.008228000000000001 2309520.0 849.87 997.37 1331.63 491.89 1131.19 935.34 711.01 1008.39 1354.4299999999998 1524.51 1558.17 True False 993.307278673413 1048.1318728882948 1520.475157570244 612.4030720817814 964.7934494783319 1034.3170579715575 840.1913135374875 1151.3323705648575 1047.6537675802665 1180.1221321818214 1171.2333856957268 0.8480865477407616 0.8948958300618213 1.2981829037148418 0.5228702319802868 0.823741417604172 0.8831007300540367 0.7173560144363573 0.9830084973892305 0.8944876233680339 1.0075892188479707 1.0 10.19381286762071 -10.080528215714295 0.666798213412563 0.9971141282629385 0.8700872675297745 0.0759654390498905 0.1766290751444034 1.6374396528535602 1.4202849114463283 0.10270642452265501 0.03771023416375817 8.307527437045184e-11 10.080528215714295 -0.12702686073316405 TPASINAT(ph)PANINLADLTR ddPTM_A549_PD325901_60min_R1 2 TPASINATPANINLADLTR 19 0 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 TPASINAT(0.982)PANINLADLT(0.018)R;T(0.01)PAS(0.005)INAT(0.952)PANINLADLT(0.032)R 97.384 1.5906e-06 5862600.0 2844.6000000000004 2291.24 2806.0 2836.6 2974.8 2975.2 3181.6000000000004 3237.8999999999996 3137.3999999999996 2891.8 3118.8 True False 3133.3816979161606 2484.330835907479 2996.4320338487414 3011.8103396139873 2765.86031050287 2950.970957624415 3302.6775290383234 3173.31754441659 3005.5459886023946 2709.2112544823253 2735.2073717021167 1.1455737251710683 0.9082787877840073 1.0955045181762817 1.1011268727824979 1.011206806152207 1.0788838126697606 1.2074687876345809 1.1601743901566914 1.0988366073070528 0.9904957417529867 1.0 11.417434500782269 -4.948751770828378 17.19343311850697 1.063260689955705 1.7715570890278958 0.07674990916850954 0.07988464997274804 10421387.104126105 77844847.6738475 0.011094421666016936 252518299.75686336 1.1252479468054757e-05 4.948751770828378 0.7082963990721907 TPASKS(ph)PSEGQTATTSPR ddPTM_A549_PD325901_60min_R1 2 TPASKSPSEGQTATTSPR 18 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TPAS(0.007)KS(0.978)PS(0.011)EGQT(0.003)ATTSPR;TPAS(0.003)KS(0.959)PS(0.038)EGQTATTSPR 132.36 3.7051999999999997e-13 57767000.0 5862.9 5482.4 6108.1 6283.4 7343.799999999999 6076.799999999999 5779.5 7509.1 6778.2 6515.0 7136.4 True False 6458.0972919611395 5944.421088484474 6522.632396989134 6671.511347363224 6827.9968227346335 6027.312555556615 5999.442035163753 7359.325109725006 6493.335825825439 6103.641788143142 6258.668041366867 1.0318644876635312 0.9497901229454306 1.0421758038415818 1.065963445140029 1.0909664448736967 0.963034389381079 0.9585812820731581 1.1758612313487966 1.0374948444153815 0.9752301524543122 1.0 12.611639942686272 -5.794390278777153 24.98699226483168 1.030317699379893 0.9908271196682333 0.0638490294814894 0.06275421129875658 377.57842322305675 286321.14579016314 0.008281417262549865 0.025750553347446508 1.605497823770238e-06 5.794390278777153 -0.0394905797116597 TPASTPVSGT(ph)PQAS(ph)PMIER ddPTM_A549_MK2206_60min_R1 5 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 2 TPAST(0.001)PVS(0.139)GT(0.86)PQAS(1)PMIER;TPASTPVS(0.099)GT(0.901)PQAS(1)PMIER;TPAS(0.001)T(0.002)PVS(0.043)GT(0.955)PQAS(0.999)PMIER;T(0.005)PAS(0.007)T(0.046)PVS(0.178)GT(0.809)PQAS(0.955)PMIER;T(0.039)PAS(0.004)T(0.02)PVS(0.007)GT(0.93)PQAS(1)PMIER 124.63 4.2714e-14 78475300.0 6516.219999999999 6439.0599999999995 5405.12 5236.969999999999 8158.2699999999995 6995.46 5986.78 6594.46 9918.49 8880.949999999999 9105.1 True False 7615.998629716627 6766.780650551049 6171.647292180317 6520.027885096515 6958.199290194917 7735.71493398947 7074.500431864472 7529.244899686761 7671.967851573869 6874.737226912355 6844.052382023886 1.1127908152369321 0.9887096522411498 0.9017533688652557 0.9526560466167046 1.0166782633737348 1.1302828356935963 1.0336712866847522 1.1001150311856984 1.1209686050510848 1.0044834322088276 1.0 12.7406350864235 -7.006728828037437 23.25310333268628 1.0650077978835384 0.982970412421748 0.2502872479691334 0.061716061479341576 138.45640717418735 478478.08451365266 0.009748995188953809 0.0179303842927505 9.846257107285033e-08 7.006728828037437 -0.0820373854617904 TPASTPVSGT(ph)PQAS(ph)PMIER ddPTM_A549_PD325901_60min_R1 4 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 2 T(0.001)PAS(0.003)T(0.033)PVS(0.329)GT(0.635)PQAS(1)PMIER;TPAST(0.001)PVS(0.081)GT(0.917)PQAS(1)PMIER;TPAS(0.001)T(0.003)PVS(0.104)GT(0.893)PQAS(0.998)PMIER;T(0.001)PAS(0.002)T(0.008)PVS(0.379)GT(0.612)PQAS(0.998)PMIER 134.24 3.2301999999999997e-16 119743000.0 8068.1 8457.1 7630.700000000001 9016.800000000001 9960.9 8007.8 8768.800000000001 9031.400000000001 9022.3 9023.5 9596.1 True False 8887.167572578704 9169.809497195027 8148.565189126731 9573.747257361418 9261.28074723949 7942.587131777633 9102.501482471476 8851.261642003765 8643.124106893403 8453.754670039852 8415.840534689849 1.056004749133026 1.0895892643637126 0.9682413961550939 1.1375865806747063 1.1004582024890754 0.9437663533474191 1.081591487499226 1.0517382792032623 1.02700663959431 1.0045050919386747 1.0 13.038891653029024 -9.19788768181268 0.3490985518484657 0.9947353741040803 1.0635738731016628 0.1295228165798027 0.05274958781668477 1.8377600035397321 0.598451476597429 0.04699202749219009 0.029200960943449678 6.340336652260457e-10 9.19788768181268 0.06883849899758254 TPASTPVSGT(ph)PQASPMIER ddPTM_A549_MK2206_60min_R1 1 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPAST(0.001)PVS(0.04)GT(0.957)PQAS(0.002)PMIER 86.016 3.9591999999999996e-05 6487200.0 1490.1 1765.5 2066.5 1606.0 2301.5 1684.2 1699.3 1368.3 2509.4 2742.2 2697.2 True False 1741.5924505527348 1855.3564089397958 2359.5607737276187 1999.4700720960789 1962.952398778614 1862.42092611852 2008.0408139045207 1562.2607152430053 1941.024906688364 2122.735115459389 2027.410801066965 0.8590229713860592 0.9151359004121798 1.1638296355557805 0.9862185162690355 0.9682065409464976 0.9186204025047041 0.9904459485210149 0.7705693954184494 0.9573910258675061 1.047017759963722 1.0 10.985422727001461 -6.836393763421234 4.816341169781073 0.9585445150557712 0.9893330230739095 0.0168668108830492 0.09556734703151604 0.8637712276225764 36.98805506991959 0.013636034458671193 0.026547576780169002 1.4574921910632933e-07 6.836393763421234 0.03078850801813826 TPASTPVSGT(ph)PQASPMIER ddPTM_A549_PD325901_60min_R1 2 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPASTPVS(0.029)GT(0.74)PQAS(0.231)PMIER;TPAST(0.001)PVS(0.068)GT(0.927)PQAS(0.004)PMIER 131.31 7.2918e-17 40509100.0 6924.9 6097.1 6160.0 7413.5 7878.599999999999 6873.1 6952.0 8070.6 6896.0 7507.8 7969.3 True False 7627.910750158062 6610.9240147743085 6578.054643089184 7871.415057719902 7325.234315694475 6817.1277523690405 7216.562164280371 7909.62555173678 6606.18510148598 7033.756226710834 6989.126621554979 1.0913968458709886 0.9458870002992554 0.9411840705249181 1.1262372945775343 1.0480900851192072 0.9753905060675992 1.0325413395751 1.1317044288971552 0.9452089594588288 1.0063855768499335 1.0 12.770896468807049 TPASTPVSGTPQAS(ph)PMIER ddPTM_A549_MK2206_60min_R1 4 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPASTPVS(0.035)GT(0.213)PQAS(0.752)PMIER;TPASTPVSGT(0.005)PQAS(0.995)PMIER;TPASTPVSGTPQAS(1)PMIER;TPASTPVSGTPQAS(1)PMIER 174.19 2.9079e-34 36728700.0 10786.8 12006.9 11175.1 10384.699999999999 15420.900000000001 13616.9 11252.7 11718.400000000001 17308.9 17122.2 17727.3 True False 12607.348128060028 12617.999924383597 12759.897218719341 12928.951966186894 13152.506037942714 15057.831319833314 13297.169932691932 13379.519086094895 13388.461786633543 13254.283128115654 13325.122161409761 0.9461337746359697 0.9469331516468925 0.9575820066905397 0.9702689258361776 0.9870458130607649 1.1300332662946662 0.9979022909974679 1.0040822833761833 1.004753399215147 0.9946837985846568 1.0 13.70186113886427 -6.762066104216882 3.2750973066693274 1.0114578215760717 0.9528260782785675 0.39551694997859155 0.03722464510241519 0.21607514882129225 4.826898664904556 0.0054391147162579775 0.011437415691041517 1.7295530828934305e-07 6.762066104216882 -0.0586317432975042 TPASTPVSGTPQAS(ph)PMIER ddPTM_A549_PD325901_60min_R1 2 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPASTPVS(0.003)GT(0.002)PQAS(0.995)PMIER;TPASTPVSGT(0.001)PQAS(0.999)PMIER 216.16 1.9035999999999998e-66 28578000.0 6041.8 6600.200000000001 5414.299999999999 5371.1 7057.4 6307.9 6106.9 6580.0 7385.700000000001 7891.6 8043.3 True False 6655.159088261919 7156.422017403914 5781.746956830805 5702.860648346849 6561.712570708272 6256.5305537775785 6339.301421323906 6448.756738089855 7075.304713463597 7393.323029211117 7054.025090679631 0.9434555452680872 1.0145160990226103 0.8196379914313225 0.8084548289857867 0.9302082834066123 0.8869447547109283 0.8986786040355771 0.9141953218468833 1.0030166638919504 1.0480999052554825 1.0 12.78423099200191 -8.718120317635364 4.4014497701835 1.0016901889595753 0.8992485263582322 0.4603415547030847 0.05489081460773147 0.14838565763200517 6.18268408562214 0.009469443135831054 0.010557011161349668 1.913725669963778e-09 8.718120317635364 -0.10244166260134313 TPATT(ph)PEAR ddPTM_A549_MK2206_60min_R1 2 TPATTPEAR 9 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 T(0.037)PAT(0.325)T(0.638)PEAR;T(0.027)PAT(0.144)T(0.829)PEAR 77.66199999999999 0.002008 33386000.0 1785.65 2351.5 2476.9 2452.5 2252.93 1976.8400000000001 2157.7599999999998 2481.7 3320.7 3758.5 4130.4 True False 2087.024065048983 2471.181305931424 2828.161664866169 3053.362610096908 1921.5269814383237 2186.027896679809 2549.797061502159 2833.4885748874995 2568.566752068243 2909.4522396083835 3104.707686759228 0.6722127412991563 0.7959465287087639 0.9109268730603991 0.9834621865107323 0.6189075350420709 0.7041010353414753 0.82126799646111 0.9126426255752167 0.8273135545167467 0.9371098773699185 1.0 11.600241727434742 -10.664395346145628 0.39877243873254 1.0567739111381782 0.7924118956891553 0.28151549697368794 0.10336866123883838 2.107730744158175 0.4385720393866509 0.23320247223857177 0.03398709456680419 2.1657317023407672e-11 10.664395346145628 -0.26436201544902294 TPATT(ph)PEAR ddPTM_A549_PD325901_60min_R1 2 TPATTPEAR 9 0 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 T(0.007)PAT(0.157)T(0.836)PEAR;T(0.014)PAT(0.108)T(0.877)PEAR 79.48899999999999 0.0018533000000000002 52517000.0 3876.6000000000004 3624.9 4180.4 4086.6 4875.7 3894.3999999999996 3906.2000000000003 4700.5 4234.5 4735.1 4598.7 True False 4270.149578197913 3930.3830445876542 4464.107082787343 4339.020000658014 4533.247652251863 3862.6852975842035 4054.8525785546562 4606.744840029087 4056.5386908704113 4436.124977902779 4033.089053561151 1.0587788966443579 0.974534157909851 1.1068704468218002 1.0758552422309473 1.1240137750613466 0.9577485759144138 1.0053962421123055 1.1422373220252617 1.0058143118086011 1.0999323146573603 1.0 11.977669546521076 -8.953178385905938 24.99998471339698 1.0025648486948526 1.0540241991598225 0.0 0.06282107757558478 164.88075755829837 88036.94766466424 0.009422463943527824 0.010028034008485492 1.1138369325156125e-09 8.953178385905938 0.051459350464969855 TPAVSIS(ph)CLELSNNLEK ddPTM_A549_MK2206_60min_R1 2 TPAVSISCLELSNNLEK 17 0 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 TPAVS(0.015)IS(0.982)CLELS(0.003)NNLEK;TPAVS(0.002)IS(0.998)CLELSNNLEK 148.03 1.7199e-16 3653700.0 2054.34 2070.78 1404.72 1196.21 2112.63 2026.41 1164.53 1553.77 2185.9300000000003 2013.6399999999999 1866.95 True False 2401.062368209185 2176.1738569834893 1603.9304186163363 1489.2815036999082 1801.8649255840394 2240.8433611779074 1376.1100270795214 1774.0216557210586 1690.820345212919 1558.757325466284 1403.3347898012653 1.7109690329484484 1.5507161033837624 1.142942104958061 1.0612446256753987 1.283987925532162 1.5967988376424749 0.9805999516867965 1.2641471362455772 1.2048588529985538 1.1107522857657004 1.0 10.454643514551822 -2.0000000000000004 0.3946303448277199 1.112646994700848 10.266009969459889 0.45832052669716505 0.17556072133176523 39.481021247709926 0.4626104678266083 0.04157236586697191 283.3668615645177 0.00999999999999999 2.0000000000000004 9.153362974759041 TPDGNKS(ph)PAPK ddPTM_A549_MK2206_60min_R1 2 TPDGNKSPAPK 11 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 T(0.001)PDGNKS(0.999)PAPK;T(0.017)PDGNKS(0.983)PAPK 64.39399999999999 0.0017369 10122400.0 4043.7 4600.1 4969.200000000001 4170.0 5582.6 3913.4 3922.8 4149.799999999999 5891.3 5790.7 6330.4 True False 4726.1777010268415 4834.225441384285 5673.9072813004 5191.650187198415 4761.406935225502 4327.51339049532 4635.521982454334 4738.046858229499 4556.929956472927 4482.57684818419 4758.3869698481085 0.9932310530805158 1.0159378528935818 1.1924013993089586 1.0910525394625767 1.0006346615768178 0.9094496555065713 0.9741792779418071 0.9957254187716349 0.9576627511272771 0.9420370551172884 1.0 12.216256886559547 -6.862211098049672 4.918672781185871 0.9752879806128179 1.0772715969766091 0.4730309002232267 0.05324120342039795 0.15098369035485246 6.032968355509602 0.0077641646828488075 0.015012528994879091 1.3733742550430596e-07 6.862211098049672 0.10198361636379127 TPDGNKS(ph)PAPK ddPTM_A549_PD325901_60min_R1 2 TPDGNKSPAPK 11 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4;E9PGZ1 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 T(0.06)PDGNKS(0.94)PAPK;T(0.082)PDGNKS(0.918)PAPK 67.275 0.0013129 18251100.0 7851.6 7237.6 7641.4 7212.9 9597.0 7063.3 7339.0 6836.4 6940.3 8062.0 8752.0 True False 8648.688651957576 7847.537952359409 8159.991355471048 7658.4244513155645 8922.939827852646 7005.778826629651 7618.289661054896 6700.042638947953 6648.623326543375 7552.963944130473 7675.5594834990825 1.1267828319942705 1.0224059847663283 1.0631135584335445 0.9977675852528595 1.1625132795902606 0.9127385230601983 0.9925386777905499 0.872906092819905 0.8662069964849579 0.9840278041448098 1.0 12.906056199268832 -7.283662366639953 24.978548095077066 0.9331608417422127 1.066724274451836 0.5657739274974474 0.05925746319653783 502.03293766724283 564281.5135707739 0.009826550347647291 0.01571608915545255 5.204004139654693e-08 7.283662366639953 0.13356343270962323 TPDGNKS(ph)PAPKPSDLRPGDVSSK ddPTM_A549_MK2206_60min_R1 4 TPDGNKSPAPKPSDLRPGDVSSK 23 3 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 T(0.001)PDGNKS(0.999)PAPKPSDLRPGDVSSK;T(0.005)PDGNKS(0.995)PAPKPSDLRPGDVSSK;T(0.069)PDGNKS(0.931)PAPKPSDLRPGDVSSK;T(0.002)PDGNKS(0.998)PAPKPSDLRPGDVSSK 87.339 3.9195999999999997e-07 98926000.0 6530.700000000001 6637.5599999999995 6092.54 5420.33 8589.8 7342.699999999999 6766.7 6379.72 8017.2 9737.4 9585.8 True False 7632.922499714619 6975.383452688994 6956.5537848373915 6748.311093327858 7326.251798839257 8119.699640310209 7996.121800416479 7284.064847073093 6201.317000837632 7537.714577081991 7205.381305378806 1.0593363732210332 0.9680797111294972 0.965466432656983 0.9365654373197785 1.0167750308190104 1.126893816743448 1.1097430464155154 1.0109201079525867 0.8606507744716242 1.0461229264098901 1.0 12.814859063823123 -8.585990348084692 12.015286956726838 0.934242413785623 1.024389775288993 0.05505289602494734 0.07114939044592915 0.7996615682081253 150.15552924080484 0.013084389773597896 0.014836200258428982 2.594237016725946e-09 8.585990348084692 0.09014736150337 TPDGNKS(ph)PAPKPSDLRPGDVSSK ddPTM_A549_PD325901_60min_R1 4 TPDGNKSPAPKPSDLRPGDVSSK 23 3 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 T(0.005)PDGNKS(0.995)PAPKPSDLRPGDVSSK;T(0.002)PDGNKS(0.995)PAPKPS(0.003)DLRPGDVSSK;T(0.078)PDGNKS(0.92)PAPKPS(0.002)DLRPGDVSSK;T(0.019)PDGNKS(0.981)PAPKPSDLRPGDVSSK 100.41 8.8973e-11 78337100.0 9085.099999999999 9529.6 9358.1 9799.0 11314.699999999999 9551.7 9979.3 10278.199999999999 10560.2 10949.4 12036.3 True False 10007.412663902871 10332.692836134103 9993.196940826772 10404.26197485632 10519.994505595952 9473.914122056045 10359.067722382495 10073.193237908088 10116.391518084714 10258.053015363708 10555.911404392127 0.9480387131459785 0.9788536906282534 0.9466920058336963 0.9856336962554736 0.9965974611362094 0.8974984498367538 0.9813522798298848 0.9542703469182975 0.9583626776059776 0.9717827880873948 1.0 13.365763526858998 -10.651681060704457 0.8310647931550575 1.0010501466676531 0.9611631226039019 0.08270157860872951 0.026610337891124443 0.7349749644973164 0.8676860665743669 0.018542670519967077 0.004481602500936456 2.230072279390322e-11 10.651681060704457 -0.03988702406375122 TPDSEDKLFS(ph)PVIAR ddPTM_A549_MK2206_60min_R1 2 TPDSEDKLFSPVIAR 15 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 TPDSEDKLFS(1)PVIAR;TPDSEDKLFS(1)PVIAR 125.79 3.3097e-08 37896000.0 7266.4 7340.299999999999 7745.2 6642.299999999999 8148.6 6722.8 6488.200000000001 7107.1 8481.5 9254.6 8957.2 True False 8492.79067357653 7713.88991704377 8843.585823699561 8269.663798184181 6949.951734385146 7434.202233766532 7667.0219553788675 8114.553189580921 6560.453792172377 7163.979432401158 6732.8800338562305 1.261390464536811 1.1457043461720007 1.3134922617408396 1.2282505787419717 1.0322405418539127 1.104163774845788 1.1387432891757037 1.2052127987988734 0.9743904182434843 1.0640289736898842 1.0 12.717008043846661 -7.72240870315739 0.43348274208169996 0.9776176638286144 1.2523981225794911 0.42757363151066663 0.079720820810045 0.5948505020283955 0.23439072686533274 0.0272427378347962 0.06169074834087784 1.8949218205836636e-08 7.72240870315739 0.27478045875087675 TPDSEDKLFS(ph)PVIAR ddPTM_A549_PD325901_60min_R1 2 TPDSEDKLFSPVIAR 15 1 Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;Q5VZ89-5;X6R5W5 Q5VZ89-3 DENND4C DENN domain-containing protein 4C 1 TPDSEDKLFS(1)PVIAR;TPDSEDKLFS(1)PVIAR 139.43 8.319799999999999e-11 51028000.0 16751.7 16429.4 15926.0 16076.6 20353.9 14990.2 16885.9 15081.0 14084.1 15829.3 17871.2 True False 18452.32025205025 17813.963196984307 17006.834130817922 17069.615069392297 18924.31228114306 14868.124781184977 17528.502164819023 14780.197624184368 13492.194255777074 14829.835296554767 15673.155694870737 1.1773200376034696 1.1365907124124455 1.0850931657868779 1.0890988006313604 1.2074347150992897 0.9486363225531399 1.1183773393226404 0.9430262744739656 0.8608473314785348 0.9461933247691812 1.0 13.936008066506082 -7.855887171840959 1.2185254253324902 0.9340727995340803 1.12835873159948 0.5829313512212082 0.06927583962562354 0.2420316063461158 0.7258089500975089 0.013455148246580256 0.021047675488708437 1.3935187871380638e-08 7.855887171840959 0.1942859320653998 TPDT(ph)PNNDPR ddPTM_A549_MK2206_60min_R1 1 TPDTPNNDPR 10 0 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 T(0.215)PDT(0.785)PNNDPR 94.29700000000001 0.00061588 12362000.0 543.31 392.79 706.77 264.06 759.37 618.73 591.35 457.22 994.02 792.73 1088.1 True False 635.0074453458196 412.7813332582622 807.0006136208411 328.75471185410396 647.6676789313564 684.2035979202658 698.7906404416165 522.0323351775246 768.876057123762 613.651742425104 817.8947399677315 0.7763926264776719 0.5046875998671267 0.9866802831531595 0.4019523488646893 0.7918716764909245 0.8365423623426894 0.8543772276481273 0.638263470429117 0.9400672477171043 0.7502820502908656 1.0 9.67577137536482 -8.624641033493416 0.5442597323063226 1.002934575069853 0.6833134590285638 0.06627166252262817 0.17587982497889565 0.5499218084284426 0.36783706242189446 0.05006995894650582 0.05394413982434745 2.3733345770646e-09 8.624641033493416 -0.3196211160412893 TPDT(ph)PNNDPR ddPTM_A549_PD325901_60min_R1 2 TPDTPNNDPR 10 0 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 T(0.478)PDT(0.522)PNNDPR;T(0.228)PDT(0.772)PNNDPR 94.69200000000001 0.00060711 25044000.0 1094.0700000000002 1241.4 1224.8 1443.9299999999998 1702.0700000000002 1377.96 1661.02 1569.81 1596.58 1405.18 1658.88 True False 1205.1391809882355 1346.0171346936786 1307.9222933207188 1533.1182766970403 1582.5224750227317 1366.7383506211822 1724.2310250450207 1538.4989080578778 1529.4812948565075 1316.4566949904813 1454.8482765067365 0.828360730427449 0.9251941638379128 0.8990094118001057 1.0537994246233287 1.0877577411869752 0.939437034563414 1.1851620907061897 1.0574978387107117 1.0512995200633386 0.9048755916675038 1.0 10.506652989586176 -6.23293760192441 6.3602855986930384 1.0386802048947084 0.8871248672145894 0.4567195475174436 0.07316093753837871 0.10955876869986482 15.642660297400662 0.008355682624475492 0.021902644190763765 5.848741109946704e-07 6.23293760192441 -0.15155533768011897 TPDTNHTPVALYPDS(ph)DLEKEEEESEEDWK ddPTM_A549_PD325901_60min_R1 1 TPDTNHTPVALYPDSDLEKEEEESEEDWK 29 1 Q15653-2;I3L1A4;I3L4X3;G5E9C2;Q15653 Q15653-2 NFKBIB NF-kappa-B inhibitor beta 1 TPDTNHTPVALYPDS(0.999)DLEKEEEES(0.001)EEDWK 141.69 7.3278e-36 7230000.0 953.76 982.18 1327.9 1000.8 1239.8 952.72 948.08 973.19 1500.7 814.31 1545.5 True False 1050.5850130789981 1064.9517555610103 1418.0192793113852 1062.6171430182883 1152.720725077806 944.9613641933097 984.1597032092822 953.7789619972148 1437.6307978248262 762.8943276289856 1355.4132977316983 0.7751030736065271 0.7857026025517241 1.046189587843397 0.7839801666374322 0.850456998619461 0.6971758103411814 0.7260956527844947 0.7036812783181161 1.0606586199432453 0.5628499653247456 1.0 10.404517115334498 -8.771444456128632 24.999821990980045 1.0286443657999258 0.799825209328991 0.0 0.1674262864768907 110.33064049708297 275683.8589913103 0.016490459677640065 0.017656414997361855 1.6926047054099791e-09 8.771444456128632 -0.22881915647093476 TPEAS(ph)PEPK ddPTM_A549_MK2206_60min_R1 1 TPEASPEPK 9 0 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 T(0.074)PEAS(0.926)PEPK 79.65899999999999 0.0017352999999999997 5723000.0 2696.7 2565.9 2444.1 3026.8 3648.5 3215.6 3193.8 3332.5 4375.2 4689.8 4174.6 True False 3151.837032015007 2696.4933501549813 2790.7101316562635 3768.3661358782147 3111.8104831387254 3555.872657657473 3774.0721187831796 3804.8920803532264 3384.22418575872 3630.370922792444 3137.9316069012884 1.0044313984036926 0.8593218998860755 0.8893470225796583 1.2009076703872081 0.9916756873524221 1.1331899808896415 1.2027260602120264 1.2125478044152027 1.078488829493848 1.1569311819314763 1.0 11.615598192908307 -6.235148382274278 24.939543284643314 1.0745728620276338 0.911862256016077 0.4592575530237363 0.08838168360781917 609.2954121265077 577974.6110899328 0.013096053993398304 0.0346372167141012 5.819043687197358e-07 6.235148382274278 -0.16271060601155685 TPEDGDYS(ph)YEIIEK ddPTM_A549_MK2206_60min_R1 2 TPEDGDYSYEIIEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPEDGDYS(1)YEIIEK;TPEDGDYS(1)YEIIEK 133.66 6.6075e-09 8988300.0 4123.8 3804.9 3726.1000000000004 3875.1 5986.8 4510.5 3791.5 4616.7 6042.9 6140.0 6012.9 True False 4819.796622769862 3998.5531579581034 4254.517008945791 4824.499673959847 5106.149650666005 4987.79811617242 4480.3664720290635 5271.131363050783 4674.192798528378 4752.969735584802 4519.730982402326 1.0663901549751187 0.8846883085578677 0.9413208497388115 1.0674307149571833 1.1297463655573559 1.1035608392606826 0.9912905191644085 1.1662489169320145 1.0341750021688134 1.05160456542449 1.0 12.142021189624641 -6.257290508682677 24.478457555807577 1.0425147993772725 0.9561886194384557 0.2690101823104639 0.06696555223597908 303.75414408337656 1792145.0934329042 0.009665651745790706 0.024616041237499074 5.529800855004e-07 6.257290508682677 -0.08632617993881686 TPEDGDYS(ph)YEIIEK ddPTM_A549_PD325901_60min_R1 2 TPEDGDYSYEIIEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPEDGDYS(1)YEIIEK;TPEDGDYS(1)YEIIEK 226.19 4.9652e-47 50486000.0 16499.2 16127.5 16394.5 15441.4 16359.8 18650.7 15420.0 17866.1 16667.0 18381.5 18364.5 True False 18174.186637930918 17486.62102446617 17507.129358137267 16395.18020803618 15210.744086246097 18498.814882819886 16006.81653814777 17509.746619815694 15966.543951053764 17220.888952993584 16105.782922157086 1.1284261513874176 1.0857355466035392 1.0870088987758748 1.0179685326244503 0.9444274866837014 1.1485821566221814 0.9938552267537912 1.0871714032434365 0.9913547219792855 1.0692363752961318 1.0 13.975291173176688 -2.000000000000004 0.24627940476176435 0.9953054050661648 1.784945175048561 0.12208502877439753 0.05757147174139499 37.36339705877228 0.45173541005585227 0.024764214319777666 12.356093039703431 0.009999999999999908 2.000000000000004 0.7896397699823962 TPEEGGYSYDISEKT(ph)TSPPEVSGYSYEK ddPTM_A549_MK2206_60min_R1 1 TPEEGGYSYDISEKTTSPPEVSGYSYEK 28 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)PEEGGY(0.016)S(0.017)Y(0.016)DIS(0.072)EKT(0.29)T(0.29)S(0.29)PPEVS(0.005)GY(0.002)SYEK 44.596000000000004 0.014551 1878200.0 472.83 638.19 419.52 343.13 781.65 391.99 277.13 218.18 770.51 831.97 1028.9 True False 552.6321444163813 670.6711450701148 479.0142442749627 427.1968654036913 666.6703204454935 433.47012161809715 327.4809337711762 249.10768314822704 595.9907152516346 644.0273991717404 773.3957338046123 0.7145528741124348 0.8671771975917707 0.6193649943199442 0.5523651692544979 0.8620041348895242 0.5604764839931318 0.42343255781898287 0.3220960140583871 0.7706154678662908 0.8327268577026377 1.0 9.59506299604196 -9.515285741163273 1.42971118811065 0.9423274399328848 0.625468519024515 0.3104058382933812 0.16443041199941516 0.2724019303291539 1.1382166179440314 0.04212588990159867 0.033129273811848325 3.052911809282215e-10 9.515285741163273 -0.31685892090836987 TPEEGGYSYDISEKTT(ph)SPPEVSGYSYEK ddPTM_A549_PD325901_60min_R1 1 TPEEGGYSYDISEKTTSPPEVSGYSYEK 28 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPEEGGYS(0.006)Y(0.002)DIS(0.025)EKT(0.101)T(0.433)S(0.433)PPEVSGYSYEK 55.033 0.0021043000000000004 8577000.0 834.89 624.2 1308.6 1247.9 900.61 2220.1 1645.3 1724.8 1640.0 1770.8 2012.5 True False 919.6474181864661 676.8035246300904 1397.4094652510564 1324.9799488134724 837.354260535831 2202.020241671809 1707.9127918427064 1690.3975109205767 1571.076503253625 1658.9913857933811 1764.9752582886072 0.5210539999740247 0.3834634629872075 0.7917445067224581 0.7507073782429265 0.4744283278779581 1.2476210254680729 0.9676695374748591 0.9577457264526505 0.8901408084196069 0.9399516384167377 1.0 10.785432244365616 -7.2455519169769005 24.99950369570883 0.9680637272975463 0.5938949011652135 0.6854391439118153 0.1393932481018359 412.56915742723464 649192.8713110534 0.02070993114218161 0.03579635574709566 5.6813047133329166e-08 7.2455519169769005 -0.3741688261323328 TPEEIRR ddPTM_A549_MK2206_60min_R1 2 TPEEIRR 7 1 Q6P452;P09525;P09525-2;B4E1S2 Q6P452 ANXA4 Annexin;Annexin A4 0 ; 87.323 0.013057 17544700.0 1168.23 1198.35 1354.8899999999999 1404.23 2201.6 1231.95 1119.25 1321.19 2169.63 2486.31 2060.15 False True 1365.398663518705 1259.340896433307 1547.0337753282417 1748.2664130382802 1877.7475564418855 1362.3141312977737 1322.6032371933347 1508.4727284746816 1678.2122691871673 1924.6508441827118 1548.5578977525252 0.8817227082696454 0.8132346218769292 0.9990157795026615 1.128964190215683 1.2125782052883682 0.8797308342651874 0.8540870438960493 0.9741145169089122 1.0837258791697837 1.2428665708760538 1.0 10.596709608416628 -5.835344193570536 5.580333486922934 1.0291224880701286 0.8480805958514046 0.2861141188550611 0.117481015883339 0.16772595724693715 9.060458422818632 0.014354442722262198 0.04688772297920776 1.4610188069762572e-06 5.835344193570536 -0.18104189221872402 TPEEIRR ddPTM_A549_PD325901_60min_R1 2 TPEEIRR 7 1 Q6P452;P09525;P09525-2;B4E1S2 Q6P452 ANXA4 Annexin;Annexin A4 0 ; 91.906 0.01247 19618800.0 1867.01 1915.85 1996.99 1683.9299999999998 2537.5 2311.8999999999996 1981.7 2013.8200000000002 2525.7 2050.79 2198.3 False True 2056.5474807798814 2077.3054031761585 2132.5177502764086 1787.9425316174932 2359.274753899771 2293.072652908002 2057.11467792785 1973.6527802887724 2419.553612358343 1921.302769409988 1927.923036171849 1.0667165868111799 1.0774835738779949 1.1061218265801782 0.9273931054673707 1.22373907548946 1.1894005154174654 1.0670107879474944 1.023719693815022 1.255005291685654 0.9965661146022684 1.0 10.912831744139988 -6.772908373649809 24.999582775985346 1.1227276105129327 1.0511964513236134 0.08226305358028907 0.09308241294828519 427.98399848864756 932900.7820558079 0.015581548953267533 0.029628502854195157 1.686908887613948e-07 6.772908373649809 -0.0715311591893193 TPEELDDS(ph)DFETEDFDVR ddPTM_A549_MK2206_60min_R1 2 TPEELDDSDFETEDFDVR 18 0 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 1 TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR 390.9 3.2899999999999976e-303 40538620.0 5911.2 5629.6 6534.3 5712.5 8190.63 6628.1 6614.4 6609.0 10365.0 10654.0 7815.63 True False 6908.866045035456 5916.122594034249 7460.9619955327225 7112.062756443866 6985.799177061955 7329.481142623305 7816.15086181961 7545.845989213639 8017.34404950382 8247.254000475647 5874.793370585424 1.176018560861654 1.0070350088661428 1.2699956449343575 1.210606451633404 1.1891140226376709 1.2476151381461984 1.3304554507320026 1.2844444924641996 1.3647023041943842 1.4038372892855986 1.0 12.520322394471789 -5.768002004055231 24.98589529666774 1.2070595086660472 1.0915267815733833 0.1337431059950085 0.11594649087050866 261.2259183350701 994582.916626611 0.019683270677269334 0.06333034358051352 1.7060745162909668e-06 5.768002004055231 -0.11553272709266382 TPEELDDS(ph)DFETEDFDVR ddPTM_A549_PD325901_60min_R1 12 TPEELDDSDFETEDFDVR 18 0 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 1 TPEELDDS(0.997)DFET(0.003)EDFDVR;TPEELDDS(0.968)DFET(0.032)EDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(0.929)DFET(0.071)EDFDVR;T(0.004)PEELDDS(0.91)DFET(0.086)EDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(0.999)DFET(0.001)EDFDVR;TPEELDDS(0.996)DFET(0.004)EDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(0.999)DFETEDFDVR;TPEELDDS(0.848)DFET(0.152)EDFDVR;TPEELDDS(1)DFETEDFDVR 458.11 0.0 2268587350.0 62405.469999999994 60740.07000000001 61611.45 61997.04 71839.55 68732.27 63635.590000000004 69089.98999999999 67399.45999999999 71573.6 74459.73000000003 True False 68740.8273739212 65858.8488661942 65792.7734967463 65826.45635530635 66793.78784099319 68172.53718123144 66057.27720018104 67711.93594940139 64566.8950841357 67054.43068117308 65301.65524911811 1.0526659257209188 1.0085326109261774 1.0075207626170368 1.008036566671797 1.022849843333722 1.0439633868569067 1.0115712526455924 1.0369099480110933 0.9887482153066506 1.0268412098494033 1.0 15.99483194083767 -8.772152911798065 24.99951419316006 0.9946866555559072 1.0226208441970555 0.11055155606421863 0.017635554438723063 142.53028980815847 332586.3462513278 0.0025185344796376536 0.0026947454421723223 1.6898458449622404e-09 8.772152911798065 0.027934188641148272 TPEELDDS(ph)DFETEDFDVRS(ph)R ddPTM_A549_PD325901_60min_R1 1 TPEELDDSDFETEDFDVRSR 20 1 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 2 T(0.015)PEELDDS(0.73)DFET(0.262)EDFDVRS(0.994)R 45.611000000000004 0.0086273 11779000.0 207.83 367.85 315.11 335.4 364.89 287.7 301.77 331.0 263.12 222.9 359.73 True False 228.92874860364034 398.8500104696871 336.4952595103623 356.1168962513327 339.26138520216216 285.3570665866311 313.25402248488024 324.3979453355232 252.06198142444757 208.82605595964796 315.4854905163532 0.72563954757144 1.2642420094087108 1.0665950404236422 1.128790093225772 1.0753628784857747 0.9045013959899991 0.992926875883196 1.0282499673902057 0.7989653692532713 0.6619196832724814 1.0 8.301429845564309 -7.259104027254808 23.840906626605577 0.9204080860625143 1.0689731118888437 0.1860309912760677 0.15511689658224181 132.17914297771355 1349366.0596290121 0.019910568723276206 0.03344304969393188 5.506757763533256e-08 7.259104027254808 0.14856502582632936 TPEELDDSDFETEDFDVRS(ph)R ddPTM_A549_MK2206_60min_R1 2 TPEELDDSDFETEDFDVRSR 20 1 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 1 TPEELDDS(0.002)DFET(0.036)EDFDVRS(0.962)R;TPEELDDSDFET(0.041)EDFDVRS(0.959)R 57.578 0.0014944000000000001 3163000.0 1081.53 1362.69 1390.49 1090.73 1824.9299999999998 1426.8999999999999 1441.23 1517.32 1996.72 2045.3100000000002 1902.4699999999998 True False 1264.065823130193 1432.0451004804136 1587.6823906414297 1357.9588989647295 1556.485214470152 1577.8936109004383 1703.0828354167077 1732.4047565976152 1544.4661081066347 1583.273050470514 1430.0341934991359 0.8839409776889064 1.0014061950339503 1.1102408584766397 0.9495989012975654 1.088425173010447 1.1033957216362125 1.1909385406019222 1.2114428902980368 1.0800204044964103 1.1071574775400437 1.0 10.481833928310406 -5.367418402107949 2.7837765800039658 1.0658183968321244 0.8696833290518133 0.3765938755331293 0.07442436434043131 0.33311765847574926 3.917727634565999 0.011465143925252493 0.13052434886127015 4.291228078715272e-06 5.367418402107949 -0.1961350677803111 TPEELDDSDFETEDFDVRS(ph)R ddPTM_A549_PD325901_60min_R1 4 TPEELDDSDFETEDFDVRSR 20 1 G3XAM7;P35221-3;P35221;P35221-2 G3XAM7 CTNNA1 Catenin alpha-1 1 TPEELDDS(0.008)DFET(0.137)EDFDVRS(0.855)R;TPEELDDSDFET(0.073)EDFDVRS(0.927)R;TPEELDDSDFETEDFDVRS(1)R;TPEELDDSDFET(0.002)EDFDVRS(0.998)R 121.5 5.264899999999999e-15 14129100.0 4576.200000000001 5164.07 4639.679999999999 4956.73 5068.38 5204.110000000001 5126.51 5226.32 5680.71 5678.0 5271.59 True False 5040.772455179617 5599.264302205243 4954.556585462338 5262.8959545494 4712.394473761782 5161.729453577174 5321.602143383914 5122.076947631276 5441.969513901159 5319.490110986456 4623.217849362304 1.0903168787243949 1.2111184211182193 1.0716684237896634 1.1383620945474868 1.0192888648783398 1.116479824607259 1.1510602175318085 1.107903004903345 1.1770956271618886 1.1506033858474116 1.0 12.174681629669372 -10.957322987585657 1.210150036699465 0.999726147341303 1.1249522455914298 0.0 0.06571801842796865 0.336815821950096 0.8737818147070284 0.03501862051354508 0.00806497835693683 1.103257814823224e-11 10.957322987585657 0.12522609825012676 TPEKLDNTPAS(ph)PPR ddPTM_A549_MK2206_60min_R1 1 TPEKLDNTPASPPR 14 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 TPEKLDNT(0.055)PAS(0.945)PPR 46.159 0.01036 7747800.0 5726.4 4186.8 2728.5 2174.7 2679.9 1995.3 1952.9 2321.9 3229.9 4406.7 5654.7 True False 6692.876322961669 4399.890236731314 3115.4423281470167 2707.5015976259915 2285.6902600420635 2206.441321627054 2307.7166512529498 2651.0364355205247 2498.3328070904404 3411.2234094139308 4250.4819282193985 1.5746158755615347 1.0351509101873786 0.7329621395313473 0.6369869683836561 0.5377484950276167 0.5191038002016329 0.5429305876897805 0.6237025542727317 0.5877763626057895 0.8025497971809875 1.0 12.0534107108618 -3.112996369496401 9.45035657474015 0.7767377067275968 0.9567680375094222 0.0 0.30340923912623596 0.0 0.0 0.041721600685642866 0.0 0.000770909913492425 3.112996369496401 0.1800303307818254 TPEKLDNTPAS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 TPEKLDNTPASPPR 14 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 TPEKLDNT(0.043)PAS(0.957)PPR 43.534 0.019138 26950000.0 2815.5 3252.5 3388.4 3391.0 3998.5 3194.6 3351.9 2810.4 3568.3 3258.9 2991.2 True False 3101.3274873384466 3526.5995896497425 3618.3572001044463 3600.45436848023 3717.6591540761515 3168.584236766255 3479.4583887300573 2754.34436728385 3418.3367600975084 3053.132497832645 2623.3013627790724 1.1822231068614104 1.3443364303038878 1.3793143446817837 1.3724898021880267 1.4171681556775995 1.2078613161735718 1.3263662490702133 1.0499534694580241 1.3030667420064128 1.163851222414728 1.0 11.357167837447081 -14.04863774565258 0.21270633242878964 0.04726760934982972 1.3451428865733939 0.33752025038543143 0.10795945845396894 16.36113613578235 0.28293492934429654 6.625477415948016 0.0740706757354632 8.940509198567406e-15 14.04863774565258 1.2978752772235642 TPEKLDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_A549_MK2206_60min_R1 5 TPEKLDNTPASPPRSPAEPNDIPIAK 26 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 2 TPEKLDNT(0.106)PAS(0.895)PPRS(0.999)PAEPNDIPIAK;TPEKLDNT(0.042)PAS(0.959)PPRS(0.999)PAEPNDIPIAK;TPEKLDNT(0.294)PAS(0.709)PPRS(0.997)PAEPNDIPIAK;T(0.022)PEKLDNT(0.028)PAS(0.962)PPRS(0.988)PAEPNDIPIAK;T(0.001)PEKLDNT(0.039)PAS(0.961)PPRS(1)PAEPNDIPIAK 158.64 4.4576999999999994e-41 164686700.0 15403.669999999998 15932.51 15161.4 13568.779999999999 20051.239999999998 14670.739999999998 13522.49 12417.26 24534.0 20475.7 27617.8 True False 18003.432912425764 16743.4067057476 17311.514500263205 16893.13170912568 17101.729157717004 16223.187969150942 15979.351395054273 14177.444631263876 18977.088172747408 15850.225149008746 20759.53804749639 0.8672366827833622 0.8065404281848585 0.8339065378360374 0.8137527757349591 0.8238010459861597 0.7814811645631713 0.7697354034803 0.6829364217463251 0.9141382688443809 0.7635153110220722 1.0 14.341486719969655 -8.962864601283716 5.40208494430678 0.9633154182602778 0.7983690992296326 0.09686966156278265 0.0756930639805887 0.07831159365666523 5.147075755679816 0.00922193621204489 0.009579175769523676 1.0892696388002098e-09 8.962864601283716 -0.16494631903064516 TPEKLDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_A549_PD325901_60min_R1 3 TPEKLDNTPASPPRSPAEPNDIPIAK 26 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 2 T(0.009)PEKLDNT(0.046)PAS(0.952)PPRS(0.993)PAEPNDIPIAK;TPEKLDNT(0.014)PAS(0.986)PPRS(1)PAEPNDIPIAK;TPEKLDNT(0.125)PAS(0.882)PPRS(0.993)PAEPNDIPIAK 103.43 1.6752e-12 242728000.0 6913.799999999999 7243.700000000001 7483.3 7114.9 8441.4 7396.0 8763.2 9307.2 11343.4 12054.3 11889.300000000001 True False 7615.683886329444 7854.152020767357 7991.161738738517 7554.3712138897135 7848.50518524907 7335.7694281359845 9096.688371407034 9121.560594642851 10866.676345736081 11293.189440800294 10426.991472482352 0.730381712349898 0.7532519846683561 0.7663918935608435 0.7245015241286321 0.7527104252422082 0.7035365328048513 0.872417359831348 0.8748027289286047 1.0421679517446707 1.0830726648817068 1.0 13.3480353328202 -8.298881964948212 1.502172032606867 1.0201651437781663 0.741341512272619 0.9095733133786208 0.03972812276931251 0.06581966586613794 0.2886101722430839 0.006240429615664068 0.007983729003209353 5.0247913763526334e-09 8.298881964948212 -0.27882363150554723 TPEKLDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_A549_MK2206_60min_R1 3 TPEKLDNTPASPPRSPAEPNDIPIAK 26 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 TPEKLDNT(0.033)PAS(0.953)PPRS(0.014)PAEPNDIPIAK;T(0.003)PEKLDNT(0.035)PAS(0.955)PPRS(0.008)PAEPNDIPIAK;T(0.124)PEKLDNT(0.124)PAS(0.735)PPRS(0.017)PAEPNDIPIAK 111.68 2.1111e-13 84004100.0 4890.93 6352.34 6788.52 6361.400000000001 8596.33 5941.360000000001 5578.46 5806.68 10850.6 9552.100000000002 11269.399999999998 True False 5716.399412242061 6675.646972962121 7751.234214210219 7919.943285574099 7331.821244489489 6570.070771644419 6591.993973244169 6629.794672211694 8392.956424847684 7394.2739757784375 8470.896960382639 0.6748281131239077 0.7880684895806566 0.9150429110945162 0.9349592283573648 0.8655306845047851 0.7756050867307023 0.7781931481487885 0.7826555680252566 0.9907990221225127 0.8729033076851912 1.0 13.0482990253863 -8.770042211719385 24.791048878646393 0.9956551156940585 0.8200683077291049 0.3604693113116775 0.07783801458445568 90.76459155745953 261558.29853165138 0.012591596659636722 0.013508723583016703 1.6980785978644219e-09 8.770042211719385 -0.17558680796495363 TPEKLDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_A549_PD325901_60min_R1 4 TPEKLDNTPASPPRSPAEPNDIPIAK 26 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0Y8P9 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 TPEKLDNT(0.043)PAS(0.835)PPRS(0.122)PAEPNDIPIAK;T(0.02)PEKLDNT(0.115)PAS(0.863)PPRS(0.001)PAEPNDIPIAK;TPEKLDNT(0.111)PAS(0.881)PPRS(0.008)PAEPNDIPIAK;TPEKLDNT(0.005)PAS(0.995)PPRSPAEPNDIPIAK 251.92 1.0602999999999996e-124 420561400.0 53004.7 47939.2 59658.200000000004 60744.8 70660.6 77728.9 65724.9 57008.9 45832.93 33838.92 35726.8 True False 58385.698124002214 51979.204626637045 63706.96420589985 64496.86833454967 65697.64322183645 77095.90160933473 68226.09703554517 55871.81276688309 43906.73134040747 31702.324816213775 31332.630090844945 1.86341516670386 1.658948019235219 2.0332466192971888 2.0584568913477503 2.0967803542618206 2.460562722816599 2.177477499901296 1.7831829822421525 1.4013101106771289 1.0117990326473376 1.0 14.935378255538692 -8.873852456305688 1.447403409684372 1.1368372979732138 2.051898533278172 0.8004297716405775 0.20099034344282493 0.1305634307391553 0.5437701569186079 0.04717660532448244 0.048333745212261574 1.3370496778378045e-09 8.873852456305688 0.9150612353049581 TPELNLDQFHDK ddPTM_A549_MK2206_60min_R1 1 TPELNLDQFHDK 12 0 P27824;P27824-2;P27824-3;D6RFL1;H0Y9Q7;H0Y9H1;D6RGY2 P27824 CANX Calnexin 0 58.486999999999995 0.012915000000000001 1780200.0 757.77 974.48 1125.9 652.63 1027.8 853.36 800.36 930.96 1251.8 1430.9 1017.2 False True 885.6630503022255 1024.0768696593889 1285.5695500314175 812.5243792976744 876.6119815184268 943.6619887854769 945.7750519723542 1062.9264309454277 968.2692987138333 1107.6586961967898 764.6011667081849 1.1583333754449328 1.3393608514466662 1.6813596499808425 1.0626773992456902 1.1464957414235695 1.2341885284431324 1.2369521433562178 1.3901710816393518 1.2663717253826525 1.4486751321156892 1.0 9.578563591363489 -10.552175697799171 0.6323837192049386 0.9745102608540674 1.286795346527186 0.0 0.2037512593375314 0.9291914081817768 0.5920527962744964 0.15751195273671592 0.033269764608518555 2.8042989036997996e-11 10.552175697799171 0.3122850856731185 TPEPLEEFPKREDQEGS(ph)PPETSLPYK ddPTM_A549_MK2206_60min_R1 2 TPEPLEEFPKREDQEGSPPETSLPYK 26 2 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 T(0.002)PEPLEEFPKREDQEGS(0.998)PPETSLPYK;T(0.109)PEPLEEFPKREDQEGS(0.89)PPET(0.001)SLPYK 114.12 1.2942000000000001e-17 14116600.0 1796.42 2310.3 3019.8 2244.54 3875.5 2838.4 2527.8 2333.0 4618.3 4180.7 3869.7 True False 2099.6117777477657 2427.8844019108515 3448.0530483922857 2794.4524007612295 3305.4190838438053 3138.7576040225686 2987.068539626814 2663.7098945128487 3572.262423909651 3236.2769663777503 2908.746691713198 0.7218269585761465 0.8346840269136233 1.1854084985177744 0.9607066881149932 1.1363722710061683 1.0790756077057706 1.0269263212698272 0.9157586331259299 1.2281105240572374 1.1126018554993675 1.0 11.506181949432658 -5.621144377311365 4.870679709925559 1.0853106639180052 0.7471846775744848 0.6141915897322859 0.09065654852118002 0.10111566317148715 3.8735785758954524 0.014358907434730808 0.06033167465316674 2.3925202522509553e-06 5.621144377311365 -0.3381259863435204 TPEPLEEFPKREDQEGS(ph)PPETSLPYK ddPTM_A549_PD325901_60min_R1 2 TPEPLEEFPKREDQEGSPPETSLPYK 26 2 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 TPEPLEEFPKREDQEGS(1)PPETSLPYK;TPEPLEEFPKREDQEGS(1)PPETSLPYK 146.78 4.7731999999999994e-33 32177000.0 3319.6 3334.4 3597.0 3687.2 3783.2999999999997 3869.7 3484.5 3837.3999999999996 4286.2 4494.8 3818.8 True False 3656.603348239641 3615.4015900778177 3841.1140505181475 3914.9499697612246 3517.5740596764517 3838.1864461949467 3617.104554291563 3760.8600466179355 4106.0659196620045 4210.997560912631 3349.1118093677214 1.091812861550887 1.0795105675377166 1.1469052898664829 1.168951707975473 1.050300575166684 1.1460311463652082 1.0800190498789097 1.122942517505245 1.2260163749018544 1.257347559772161 1.0 11.70956282557017 -11.109808160871333 1.4718072555160484 1.0003910945411019 1.1354744665471437 0.0 0.0894302125931292 0.30248459108502435 1.1774822189168817 0.039468731580166304 0.008678954199403855 7.765900808413322e-12 11.109808160871333 0.1350833720060418 TPEPSS(ph)PVKEPPPVLAKPK ddPTM_A549_MK2206_60min_R1 2 TPEPSSPVKEPPPVLAKPK 19 2 A0A087WX60;Q86TC9-2;Q86TC9 A0A087WX60 MYPN Myopalladin 1 TPEPS(0.373)S(0.627)PVKEPPPVLAKPK;TPEPS(0.119)S(0.881)PVKEPPPVLAKPK 114.72 1.4121e-14 11798800.0 3803.1000000000004 4807.3 5155.6 4192.7 6526.6 4246.1 4548.5 4376.4 6567.4 6685.200000000001 6414.9 True False 4444.970303132077 5051.971036361529 5886.741604176195 5219.911688217455 5566.545785734741 4695.419483666932 5374.90357326235 4996.768102162894 5079.8943859827705 5175.008676926955 4821.903287766749 0.9218290035822665 1.0477130574514977 1.220833611306755 1.0825417634278274 1.1544291649019929 0.9737689048179983 1.1146850636549621 1.0362646871910062 1.0535039968285034 1.07322946315743 1.0 12.235386999962019 -9.73472596071718 0.48472582080973 0.998891139673762 1.079600380631138 0.0 0.07953561244334836 1.6230688348988789 0.8071304072001646 0.05531989529697269 0.02279642479661309 1.841933892870632e-10 9.73472596071718 0.08070924095737608 TPEPSS(ph)PVKEPPPVLAKPK ddPTM_A549_PD325901_60min_R1 2 TPEPSSPVKEPPPVLAKPK 19 2 A0A087WX60;Q86TC9-2;Q86TC9 A0A087WX60 MYPN Myopalladin 1 T(0.043)PEPS(0.141)S(0.816)PVKEPPPVLAKPK;TPEPS(0.389)S(0.611)PVKEPPPVLAKPK 125.73 1.6194000000000002e-15 26044000.0 7530.700000000001 7856.0 8591.1 7902.0 9522.7 9176.0 9046.599999999999 8794.8 9053.5 8449.1 9751.1 True False 8295.211120191674 8518.052690634393 9174.143708481091 8390.08859325591 8853.858403531558 9101.273698293098 9390.873313489466 8619.380814612876 8673.012879394333 7915.622384067573 8551.776517315793 0.9699985849016727 0.9960565121629271 1.0727763628884732 0.9810930601691363 1.0353238751742522 1.064255325178888 1.0981195888918116 1.007905292796204 1.0141767458297184 0.925611464242532 1.0 13.062008436414008 -4.063781616745168 12.453525513460534 1.0174602534108705 0.5780734817544817 0.0 0.04762651111300143 0.0 0.0 0.005117563290522023 0.0 8.63412602223351e-05 4.063781616745168 -0.43938677165638884 TPEPVVPTAPELRPS(ph)TSTDRPVTPKPTSR ddPTM_A549_PD325901_60min_R1 1 TPEPVVPTAPELRPSTSTDRPVTPKPTSR 29 3 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 TPEPVVPTAPELRPS(0.219)T(0.219)S(0.219)T(0.219)DRPVT(0.123)PKPT(0.001)S(0.002)R 82.336 7.206e-07 27113000.0 1213.7 1147.4 1108.9 1234.5 1231.7 1114.6 894.08 960.7 1083.2 1081.4 1398.4 True False 1336.9139305212834 1244.095424800651 1184.1566223574018 1310.7522612470798 1145.1896411343232 1105.5230671444515 928.1047036593488 941.5380848454303 1037.6768709294681 1013.1202194471215 1226.4056651879694 1.090107432206273 1.0144240687358292 0.9655505156003238 1.0687754455587766 0.9337771943175114 0.901433431469847 0.7567681151547025 0.7677215717208238 0.8461122615333198 0.8260889917626416 1.0 10.26022055108951 -6.916185675887858 4.6527796245717274 0.897152218808129 1.0278573017445294 0.5147137304427196 0.07656359049941694 0.21053471104739954 8.29065388832777 0.013747596775920518 0.026472433324027583 1.2128701957105625e-07 6.916185675887858 0.13070508293640037 TPEPVVPTAPELRPSTSTDRPVT(ph)PKPTSR ddPTM_A549_MK2206_60min_R1 2 TPEPVVPTAPELRPSTSTDRPVTPKPTSR 29 3 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 TPEPVVPTAPELRPS(0.109)T(0.109)S(0.109)T(0.109)DRPVT(0.562)PKPT(0.001)S(0.001)R;TPEPVVPTAPELRPS(0.033)T(0.033)S(0.033)T(0.033)DRPVT(0.794)PKPT(0.033)S(0.039)R 87.368 8.6033e-10 23576000.0 1597.9 1784.43 1371.05 2053.2 2304.55 1336.8600000000001 1826.6799999999998 1616.61 2052.9900000000002 2283.3 2635.6 True False 1867.5864550957756 1875.2498650832285 1565.4855063243413 2556.2340921716514 1965.5537478189244 1478.325637864152 2158.5641110710926 1845.7694181604884 1587.9910429513607 1767.5009441792793 1981.1077811404764 0.9426980565492761 0.9465663014072319 0.7902071362433035 1.2903054122073503 0.9921488202360207 0.7462116155099422 1.0895742935442205 0.9316855123843505 0.801567213085798 0.8921780839010037 1.0 10.952091656099466 -7.055394038166091 24.999790546794202 0.9098048861023221 0.9955357505312395 0.0791115461808154 0.13946607232458982 642.5428125544094 289983.80834572023 0.021141076142386434 0.03661752876434858 8.802498542526096e-08 7.055394038166091 0.08573086442891742 TPEPVVPTAPELRPSTSTDRPVT(ph)PKPTSR ddPTM_A549_PD325901_60min_R1 1 TPEPVVPTAPELRPSTSTDRPVTPKPTSR 29 3 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 TPEPVVPTAPELRPS(0.006)T(0.006)S(0.006)T(0.006)DRPVT(0.917)PKPT(0.028)S(0.028)R 111.1 1.1787e-15 24337000.0 1112.0 1211.1 930.79 1344.3 1473.4 1165.1 1084.6 1539.6 1275.1 1126.6 1666.6 True False 1224.889421388866 1313.1636473558199 993.9590066949644 1427.3343578731865 1369.913466954057 1155.6118118876739 1125.8750465158932 1508.8914702071647 1221.5119812796936 1055.4662837332414 1461.6187654478476 0.8380361899729396 0.898431026200912 0.6800398504670335 0.9765435362591584 0.93725771681257 0.7906383245795208 0.7702932345500636 1.0323427051409213 0.8357254368620644 0.7221214646966038 1.0 10.513351346348745 -14.999999384288987 0.2604436795654123 1.955596735689898 0.8466028221848435 0.0 0.12605182534276152 46.87407988336011 0.6091305882244886 23.20325985506136 0.04285923631746971 1.0000014177280047e-15 14.999999384288987 -1.1089939135050546 TPESQPDT(ph)PPGT(ph)PLVSQDEKR ddPTM_A549_MK2206_60min_R1 1 TPESQPDTPPGTPLVSQDEKR 21 1 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 A0A0D9SEV0 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 2 T(0.015)PES(0.018)QPDT(0.967)PPGT(0.997)PLVS(0.003)QDEKR 83.36200000000001 3.7141e-05 4674300.0 1277.6 1491.2 1379.8 1356.7 2276.0 1387.0 1530.1 1495.6 2083.1 2315.6 2510.5 True False 1493.2276456789314 1567.0957105698233 1575.4763878971046 1689.0915609045778 1941.2034149989684 1533.771419383914 1808.099364064795 1707.6058800829053 1611.2811760271507 1792.5043517459544 1887.073563724832 0.7912927584717465 0.8304370008112376 0.8348780981210525 0.8950851696372324 1.028684547499723 0.8127777575117174 0.9581499093738813 0.904896297053899 0.8538518089600577 0.9498857841067888 1.0 10.88193494922861 -14.999999999999998 0.23798225148165864 1.7003754497885677 0.8633864664358881 0.24916500787930462 0.06555873267621552 40.03910479274266 0.5072308413747284 13.244267568607928 0.03738682772688704 1.000000000000004e-15 14.999999999999998 -0.8369889833526796 TPESQPDT(ph)PPGTPLVSQDEK ddPTM_A549_MK2206_60min_R1 2 TPESQPDTPPGTPLVSQDEK 20 0 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 A0A0D9SEV0 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 T(0.001)PES(0.006)QPDT(0.993)PPGTPLVSQDEK;TPESQPDT(1)PPGTPLVSQDEK 141.45 7.5936e-21 18242600.0 2858.3 3165.0 2834.7 2954.3 4175.6 3735.1 2823.5 3540.5 4232.299999999999 3995.0 4422.9 True False 3340.711161274332 3326.0849811919857 3236.7030850644483 3678.1036326235658 3561.374771383874 4130.34580284128 3336.4934020240194 4042.376717326508 3273.690807594312 3092.5267253519987 3324.5718641699104 1.004854549025804 1.0004551313925207 0.9735698963068131 1.1063390363925631 1.0712280909809988 1.2423692347744022 1.0035858866468166 1.2159089598551425 0.984695455940068 0.9302030010785014 1.0 11.698952848070293 TPESQPDT(ph)PPGTPLVSQDEK ddPTM_A549_PD325901_60min_R1 1 TPESQPDTPPGTPLVSQDEK 20 0 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 A0A0D9SEV0 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 T(0.016)PES(0.058)QPDT(0.924)PPGT(0.001)PLVSQDEK 75.896 0.00030786 8223600.0 3730.0 3592.1 2704.1 3570.2 4131.8 3609.4 3586.3 3709.2 4168.2 4010.0 4218.8 True False 4108.666854119131 3894.818873476048 2887.616487074263 3790.7231454875027 3841.596621936182 3580.0062430927555 3722.7786089986607 3635.217096188892 3993.025049305955 3756.8079156491203 3699.9143451766336 1.1104762085844946 1.0526781190363232 0.7804549558934205 1.0245434871834942 1.038293393722547 0.9675916545905461 1.006179673821864 0.982513852226854 1.0792209431851938 1.015376996644978 1.0 11.85327615669576 -8.730366619085403 24.925704099702145 1.0374099099738028 0.9919311672753514 0.036524940506395986 0.07988375853867477 445.5248286975615 357387.47098417446 0.013708440845306884 0.015543120089323991 1.8605158788082624e-09 8.730366619085403 -0.045478742698451424 TPESQPDT(ph)PPGTPLVSQDEKR ddPTM_A549_MK2206_60min_R1 2 TPESQPDTPPGTPLVSQDEKR 21 1 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 A0A0D9SEV0 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 TPESQPDT(1)PPGTPLVSQDEKR;TPESQPDT(1)PPGTPLVSQDEKR 203.25 5.192099999999999e-56 239520000.0 12382.7 13354.8 12675.4 11591.599999999999 17905.2 12243.0 11281.5 12116.099999999999 19764.6 18923.9 19427.4 True False 14472.597032051102 14034.502277037202 14472.962318561365 14431.542520366702 15271.368798875017 13538.546133754333 13331.202519898688 13833.59427900005 15287.949657580632 14648.977846780648 14603.040411036767 0.9910673821811055 0.9610671395821193 0.9910923965959109 0.9882560147857669 1.045766386247424 0.9271046133325834 0.9129059527783788 0.9473091828565248 1.0469018250491329 1.0031457446155638 1.0 13.833981154768566 -8.760494649734886 24.999925545546432 1.0221480842202986 0.9706633233811837 0.24369872673341675 0.03582635242033745 25.222151184487448 667444.412971205 0.0067131610067362665 0.007399396090603553 1.7358226471038876e-09 8.760494649734886 -0.05148476083911491 TPESQPDT(ph)PPGTPLVSQDEKR ddPTM_A549_PD325901_60min_R1 2 TPESQPDTPPGTPLVSQDEKR 21 1 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 A0A0D9SEV0 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 TPESQPDT(0.999)PPGT(0.001)PLVSQDEKR;T(0.001)PES(0.009)QPDT(0.981)PPGT(0.01)PLVSQDEKR 160.04 8.3498e-28 508910000.0 15406.1 15575.9 16442.9 15432.6 18040.5 16644.8 15299.9 16615.0 17339.0 17258.3 19443.4 True False 16970.115930628606 16888.5357566258 17558.81407319012 16385.83665202243 16773.397516346322 16509.25026736585 15882.146066926518 16283.600790784649 16610.302127996718 16168.607992680092 17051.985061867686 0.9951988504011677 0.9904146464679119 1.029722581241044 0.9609342602970652 0.9836624566283281 0.9681717528761199 0.931395729547218 0.9549387201375558 0.9740978582687903 0.9481950596377757 1.0 14.05765207611343 -6.27421639621467 24.919608296375813 0.9780221229393218 1.0036422902262156 0.2834712496299263 0.022242930350225433 900.0371623612759 1755384.1396379948 0.003400880313345425 0.007949169423613426 5.318431913562661e-07 6.27421639621467 0.02562016728689387 TPETVVPTAPELQISTSTDQPVT(ph)PKPTSR ddPTM_A549_PD325901_60min_R1 2 TPETVVPTAPELQISTSTDQPVTPKPTSR 29 1 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 TPETVVPTAPELQIS(0.001)T(0.001)S(0.003)T(0.002)DQPVT(0.841)PKPT(0.067)S(0.086)R;TPETVVPTAPELQISTSTDQPVT(0.99)PKPT(0.005)S(0.005)R 110.09 2.7203000000000004e-15 12197900.0 1652.33 2210.9 2823.3 2246.7200000000003 2643.7 2190.52 2763.5 2965.7 2408.4 1714.62 2699.8999999999996 True False 1820.0733252189432 2397.2203021542255 3014.9061158820923 2385.4947917286663 2458.01563226988 2172.681131384592 2868.6665047452248 2906.546786953357 2307.1833234366054 1606.3586005811194 2367.8294160762302 0.7686674187176107 1.0124125859229756 1.2732784276656819 1.0074605778323802 1.0380881391122756 0.9175834697522165 1.2115173860365922 1.2275152792762598 0.9743874739337758 0.678409766208177 1.0 11.209349434275278 TPGAS(ph)LRK ddPTM_A549_MK2206_60min_R1 1 TPGASLRK 8 1 H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 T(0.001)PGAS(0.999)LRK 51.276 0.012359 5807700.0 1990.1 2451.8 2169.2 1832.1 2895.0 2347.4 2127.4 2247.2 3317.5 3348.1 2962.0 True False 2325.980226726393 2576.5861475154866 2476.8251780159444 2280.9645822460934 2469.1493349833113 2595.8003099219895 2513.9210424883636 2565.7474817613697 2566.091546958895 2591.7618846435607 2226.453652958753 1.0447018394635694 1.1572601765554111 1.112453059476208 1.0244832984575718 1.1090054947705907 1.1658901169904923 1.1291144727614666 1.152392046585711 1.1525465816675744 1.164076279422815 1.0 11.120531864849593 -10.83927390794208 1.0834220902594793 0.9999418141013035 1.119562462518102 0.0 0.06445666180856499 0.34365654083113145 0.715513474756333 0.031004821223058365 0.007595249004518886 1.4478584065171584e-11 10.83927390794208 0.11962064841679854 TPGAS(ph)LRK ddPTM_A549_PD325901_60min_R1 1 TPGASLRK 8 1 H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 T(0.011)PGAS(0.989)LRK 46.406000000000006 0.016776 13215000.0 2366.6 3308.9 3382.1 3404.8 4032.1 3911.0 3971.2 4175.7 4065.3 3936.3 4077.9 True False 2606.8554898011603 3587.752615585561 3611.629644219468 3615.1067631381584 3748.899205989857 3879.150112687919 4122.3261891240245 4092.4123877267193 3894.4495784615638 3687.7613462268405 3576.3441519379467 0.7289162840742157 1.003189979253376 1.009866358153032 1.010838613274734 1.0482490070085695 1.084669133586008 1.1526648482334179 1.1443004962229728 1.0889470959754368 1.0311539352913 1.0 11.804269858544615 -4.709326487616887 1.217440753426074 1.0593566043368556 5.310633695667583e-12 0.7972557788654231 0.04854973860259472 1.946345031649958 0.9387382836371486 0.008546501244003564 3.6148095318637035 1.952870802869245e-05 4.709326487616887 -1.059356604331545 TPGDFSYAYQKPEETTRS(ph)PDEEDYDYESYEK ddPTM_A549_MK2206_60min_R1 2 TPGDFSYAYQKPEETTRSPDEEDYDYESYEK 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPGDFSYAYQKPEET(0.001)T(0.004)RS(0.995)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.01)T(0.047)RS(0.943)PDEEDYDYESYEK 366.48 7.164199999999995e-298 550210000.0 27348.0 31109.0 29145.0 24377.6 41016.0 31803.0 30532.0 32541.0 45034.0 44343.0 43597.0 True False 31963.67380559438 32692.315222717683 33278.19925008053 30350.113094352047 34982.60073356667 35168.37235087714 36079.2691873906 37153.78640263295 34833.8709045205 34325.885502448975 32770.661684011735 0.9753746846432744 0.9976092499428452 1.0154875592980905 0.9261367190873465 1.0674975400522384 1.0731663794275845 1.1009624869733126 1.133751486646352 1.0629590345292104 1.0474578094709637 1.0 15.000117182689655 -6.784196139137796 24.999840701754586 1.0493707089877398 0.982637218222662 0.5033337504360941 0.04028397064838301 226.33959341525357 248648.84147937922 0.0072132137571468205 0.01363809449329946 1.6436292481300487e-07 6.784196139137796 -0.06673349076507773 TPGDFSYAYQKPEETTRS(ph)PDEEDYDYESYEK ddPTM_A549_PD325901_60min_R1 2 TPGDFSYAYQKPEETTRSPDEEDYDYESYEK 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPGDFSYAYQKPEETT(0.002)RS(0.998)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.003)T(0.006)RS(0.991)PDEEDYDYESYEK 444.63 0.0 1238350000.0 39193.0 38554.0 38655.0 40535.0 44718.0 43212.0 39419.0 37846.0 46258.0 46233.0 44574.0 True False 43171.84450763837 41803.08088527479 41278.360751398126 43038.754888335636 41577.16194872507 42860.095798892966 40919.111615904476 37091.13184038736 44313.937126528195 43313.84048982686 39091.680577866544 1.10437422667579 1.069360034343047 1.0559372260595434 1.1009696756988212 1.0635808267671611 1.0963994170964364 1.0467473132652325 0.948824181823181 1.1335899728910213 1.1080066103464192 1.0 15.254573987948369 -7.775034524291209 24.62588028254459 1.0531854120639945 1.0800778186434634 0.10631361255128224 0.04814243246067253 539.06007822771 976437.9986748826 0.009004969334084798 0.0124807604804597 1.678670566703001e-08 7.775034524291209 0.026892406579468897 TPGFSVQSIS(ph)DFEK ddPTM_A549_PD325901_60min_R1 1 TPGFSVQSISDFEK 14 0 Q9NY61 Q9NY61 AATF Protein AATF 1 TPGFSVQS(0.049)IS(0.951)DFEK 107.61 1.6921e-05 1162900.0 1697.1 1395.4 1578.1 1392.4 1414.6 1938.9 1800.0 1722.5 1735.1 1732.4 1867.1 True False 1869.3883426610112 1512.9952551567262 1685.199355886207 1478.4053856301603 1315.2433761050693 1923.1102412402465 1868.4999849977946 1688.1433862248903 1662.1797809727832 1623.0159683467666 1637.4585365220676 1.1416401093315978 0.9239899645766304 1.0291554370992135 0.9028658452447087 0.80322240030494 1.1744482063801738 1.1410975870976587 1.030953363747748 1.0150973254585263 0.991179887702087 1.0 10.677242660068602 -7.26729914052099 24.999493903344263 1.0309020845908412 0.9588129190678397 0.1757636110700591 0.09651006064269223 848.9683875177985 3621952.1545709134 0.014511379276159447 0.02357507280782403 5.403819815066901e-08 7.26729914052099 -0.07208916552300149 TPGHPPPPEIPSELGACDFEKPES(ph)PR ddPTM_A549_MK2206_60min_R1 2 TPGHPPPPEIPSELGACDFEKPESPR 26 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR 141.13 1.7467999999999997e-32 34991000.0 2376.9 2487.6 2706.1 2916.5 3575.4 2578.6 2492.0 2908.1 4508.0 3545.6 4279.8 True False 2778.062610374334 2614.2082146013236 3089.8656713207397 3631.042630926662 3049.463396303742 2851.4657404638506 2944.7641430295216 3320.332080682735 3486.9451977967433 2744.646497473854 3217.0075435289928 0.8635548946605375 0.8126211018248312 0.9604782175708606 1.1287019324000345 0.9479192557187919 0.8863721026080809 0.915373713982397 1.0321182141339953 1.083909549671629 0.8531675665463414 1.0 11.651503603617957 -8.28849249923731 8.58083204579061 1.0402305543224308 0.9338903834139856 0.003947922508676482 0.09519923100681461 0.3249416246594261 96.25631073719774 0.013889609876275744 0.016916853853853428 5.1464469543979626e-09 8.28849249923731 -0.10634017090844528 TPGHPPPPEIPSELGACDFEKPES(ph)PR ddPTM_A549_PD325901_60min_R1 2 TPGHPPPPEIPSELGACDFEKPESPR 26 1 A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538 A0A669KB10 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 TPGHPPPPEIPS(0.023)ELGACDFEKPES(0.977)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR 123.19 8.023e-18 48377000.0 6723.8 6955.9 7131.0 7552.0 7887.0 9389.4 8412.4 8465.1 7109.4 8981.8 8608.1 True False 7406.395226200053 7542.098104733176 7614.952542186523 8018.469888163581 7333.0443286729005 9312.935839445643 8732.538485441915 8296.256939757517 6810.616641604467 8414.687615156423 7549.358271241823 0.9810628877441985 0.9990383068006848 1.0086887214234581 1.0621392706594375 0.9713467112306832 1.2336062887519739 1.1567259324156391 1.0989353851917316 0.9021451091476895 1.1146229007584585 1.0 12.882138298868645 -8.755713947298775 24.998729253660493 0.9537907449273925 1.0655391953716606 0.0 0.09146326568454856 139.47029080044263 608963.7061402089 0.014601971520648082 0.01633696435373859 1.7550360945056066e-09 8.755713947298775 0.11174845044426818 TPGLRT(ph)PAAGER ddPTM_A549_MK2206_60min_R1 1 TPGLRTPAAGER 12 1 Q53HL2 Q53HL2 CDCA8 Borealin 1 T(0.002)PGLRT(0.998)PAAGER 80.609 0.00031847 18575000.0 2031.9 1928.4 1930.0 1967.9 2567.9 1742.7 1822.8 2091.0 2879.2 2993.9 3623.5 True False 2374.8350448145115 2026.54732313764 2203.7030211925016 2450.0355883423877 2190.1653116765597 1927.1113572893644 2153.979165294626 2387.4056534189317 2227.0657971376186 2317.575910646147 2723.6849464875227 0.8719198774722864 0.744046159138591 0.8090888133131579 0.8995297314037607 0.8041184478773903 0.7075382781604665 0.7908327165637891 0.8765351721379309 0.8176664485404795 0.8508972058735736 1.0 11.411344118545486 -10.629300180036541 0.5567840605047238 1.0280829088638397 0.8058874019688019 0.17534381039435598 0.06878452731116319 0.6204868334874563 0.27995187617788225 0.07083776019851376 0.012303985256188171 2.3480093390889877e-11 10.629300180036541 -0.22219550689503775 TPGLRT(ph)PAAGER ddPTM_A549_PD325901_60min_R1 2 TPGLRTPAAGER 12 1 Q53HL2 Q53HL2 CDCA8 Borealin 1 T(0.001)PGLRT(0.999)PAAGER;T(0.262)PGLRT(0.738)PAAGER 110.84 3.0004e-05 46824000.0 5008.8 4573.9 5402.700000000001 5600.5 6332.299999999999 5436.2 5181.6 6018.1 6101.799999999999 6429.1 5996.0 True False 5517.289688716324 4959.358605103448 5769.35971107434 5946.430165341654 5887.541093249068 5391.929389566365 5378.788623480316 5898.064274391881 5845.362565581078 6023.165528802933 5258.530011775648 1.0492076067572544 0.9431074072027253 1.0971430605425414 1.1308160554424074 1.11961728469075 1.0253681879711611 1.0228692450999364 1.121618448726944 1.111596311610148 1.1454086056968402 1.0 12.360443844424134 -5.7728516635133404 24.998741552033923 1.066355327887581 0.9961574914103752 0.2283190173883688 0.05468316991804594 241.75957241514166 529581.2783930348 0.008049157740380805 0.025334133150437976 1.6871291784153232e-06 5.7728516635133404 -0.07019783647720579 TPGNGDGGST(ph)SETPQPPR ddPTM_A549_MK2206_60min_R1 1 TPGNGDGGSTSETPQPPR 18 0 H0YNI8;H0YNX3;H0YLV1;H0YMT8;H0YM21;H0YNE0;H0YMJ0;H0YLJ3;B3KTM8;Q9UBU8-3;Q9UBU8-2;Q9UBU8 H0YNI8 MORF4L1 Mortality factor 4-like protein 1 1 T(0.003)PGNGDGGS(0.247)T(0.363)S(0.064)ET(0.323)PQPPR 78.069 0.00040015 2532100.0 406.05 587.85 512.86 294.52 529.8 540.96 274.55 412.83 628.55 691.23 748.79 True False 474.5813130306277 617.7690540896396 585.5912598180238 366.67741322150516 451.86712182181617 598.2040281398139 324.43218116723705 471.349916738851 486.1844285880971 535.0806629199158 562.8447774473282 0.8431832932393865 1.0975833459651338 1.0404134199731903 0.6514716453166688 0.8028272446111531 1.0628223839134665 0.5764150155903293 0.8374421077096351 0.8637984184433424 0.9506718092804715 1.0 9.13659329736744 -4.188108612667193 16.48925400708274 0.9022620891767164 0.8856660532775363 0.0 0.16040937133018934 0.0 0.0 0.02073599991741414 0.0 6.484722369048914e-05 4.188108612667193 -0.016596035899180017 TPGPPRS(ph)TPLEENVVDREQIDFLAAR ddPTM_A549_MK2206_60min_R1 1 TPGPPRSTPLEENVVDREQIDFLAAR 26 2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 T(0.015)PGPPRS(0.493)T(0.493)PLEENVVDREQIDFLAAR 90.12299999999999 3.4144999999999997e-09 8138200.0 463.68 649.22 650.36 582.48 935.44 563.8 473.74 642.01 950.52 1072.6 1067.2 True False 541.9378481124033 682.2625249571757 742.5908273900285 725.1876261485212 797.8380151698746 623.4609417798491 559.8124258101144 733.016883573165 735.2287376685354 830.2989150469472 802.1847867783873 0.6755773196458285 0.8505054398964295 0.9257104343405825 0.9040156808020625 0.994581333777259 0.7772036469099572 0.6978596889855616 0.9137755984091847 0.9165328859217704 1.0350469477007505 1.0 9.647790795857969 -9.244020786519984 1.0451244029047675 0.9793059900207043 0.8457843220918722 0.32983394776676456 0.09337164089777875 0.44719319798055673 1.0235537418366873 0.024107652027918387 0.02014576925331359 5.70136983314596e-10 9.244020786519984 -0.13352166792883213 TPGPPRS(ph)TPLEENVVDREQIDFLAAR ddPTM_A549_PD325901_60min_R1 1 TPGPPRSTPLEENVVDREQIDFLAAR 26 2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 T(0.006)PGPPRS(0.557)T(0.438)PLEENVVDREQIDFLAAR 103.95 1.0322e-12 12638000.0 542.84 753.75 555.29 801.3 890.0 941.97 747.46 845.01 778.06 707.19 925.75 True False 597.9487171823129 817.2711577858554 592.975318630031 850.7944811156618 827.4894703333183 934.298908629158 775.9049993258059 828.1556126524795 745.3608439765336 662.5379027101999 811.8886188127595 0.7364910694975684 1.0066296519601012 0.7303653541752443 1.0479201966887959 1.0192155071016664 1.1507722697177372 0.9556791182273583 1.0200359919609507 0.9180580029148446 0.8160453138006072 1.0 9.665138010647905 -6.274329970824199 24.990064225981165 0.9866360034691395 0.8427087809395251 0.33342457614437304 0.10383020024281124 626.4791641481884 1214509.7341636291 0.012490582803086854 0.029198551695888655 5.317041244610439e-07 6.274329970824199 -0.14392722252961443 TPGRQS(ph)PGPGHR ddPTM_A549_MK2206_60min_R1 1 TPGRQSPGPGHR 12 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 T(0.01)PGRQS(0.99)PGPGHR 51.073 0.0077318 8328700.0 1926.8 1390.3 1356.8 1191.3 3010.7 1575.9 1565.4 1544.6 2778.5 2548.1 2658.7 True False 2251.996734262809 1461.060331548569 1549.2146420486972 1483.1685534794883 2567.830018250174 1742.6606920022425 1849.8129171341943 1763.5517801391122 2149.1741863527604 1972.4824402676932 1998.4714136129085 1.126859618267728 0.7310889320689414 0.7751998009558572 0.7421514980783052 1.2848970471926633 0.8719968072256775 0.9256138989699313 0.8824503408587165 1.0754090209713865 0.9869955741332164 1.0 10.964681221076262 -6.69739180516928 24.99999999999951 1.017934696823609 0.8308705456782551 0.2136356022938921 0.145404054624153 61.817607414081216 24128.83141470846 0.019521161232970246 0.040636532429479365 2.007281097265233e-07 6.69739180516928 -0.1870641511453538 TPGRQS(ph)PGPGHR ddPTM_A549_PD325901_60min_R1 2 TPGRQSPGPGHR 12 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 T(0.024)PGRQS(0.976)PGPGHR;T(0.153)PGRQS(0.847)PGPGHR 47.506 0.0098395 18729300.0 3890.4 3885.2999999999997 3269.3 2652.8 4160.9 2732.5 2624.3 2486.7 3297.3 4098.0 3910.7 True False 4285.350544038889 4212.727866461538 3491.1743578979654 2816.657431054074 3868.6527383257344 2710.247425957488 2724.1691725720634 2437.100817721587 3158.7259476696217 3839.251580630943 3429.708691969818 1.2494794540633833 1.2283048634203393 1.017921541287766 0.8212526730473881 1.1279828946941302 0.790226712928463 0.7942858759259419 0.7105853693719577 0.920989574148188 1.1194104005450993 1.0 11.743870328553434 -5.843963710338023 3.2983992851364317 0.9235575942744565 1.2473919739616373 0.4929486515506303 0.1268754644579482 0.14240362120698513 3.030891994819585 0.016641642800125873 0.06381751581809864 1.4323075779442093e-06 5.843963710338023 0.32383437968718076 TPGRT(ph)PGK ddPTM_A549_MK2206_60min_R1 2 TPGRTPGK 8 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 T(0.018)PGRT(0.982)PGK;T(0.002)PGRT(0.998)PGK 69.672 0.0027551 310390000.0 10993.5 9891.599999999999 8415.6 5779.6 12159.7 9665.599999999999 10642.4 11683.4 12138.099999999999 15253.0 14516.3 True False 12848.934034730217 10395.040189560399 9609.058624428817 7195.602259456107 10371.024237857195 10688.407376493991 12575.986322543089 13339.557728911881 9388.8397305627 11807.336706331429 10911.502080501403 1.1775586843988197 0.9526681214803681 0.8806357322334181 0.6594511192289904 0.9504671457094775 0.9795541711524689 1.1525440062936962 1.2225225849289216 0.8604534610629214 1.0821000279540671 1.0 13.413562096694525 -6.9901234021468985 24.980087797144126 0.9771422652015298 0.9033852413241584 0.04331316843417654 0.15188489949568224 625.3921352380665 1581742.7425983804 0.023323932539714032 0.04404182719256555 1.0230022710794608e-07 6.9901234021468985 -0.07375702387737137 TPGRT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 TPGRTPGK 8 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 T(0.018)PGRT(0.982)PGK;T(0.012)PGRT(0.988)PGK 60.434 0.004477 412100000.0 15032.5 15276.2 12562.599999999999 12365.5 13060.1 10485.9 10010.7 11068.0 11567.099999999999 14343.6 18137.6 True False 16558.588333658397 16563.578985828564 13415.173581050673 13129.288850911913 12142.803630899061 10400.506306989064 10391.662666565237 10847.240057321973 11080.97501267378 13437.942648105916 15906.790183719479 1.0409760952656577 1.0412898387747207 0.8433614466594924 0.8253889502075457 0.7633723391490485 0.6538406672160629 0.6532847008443634 0.6819251358721051 0.6966191723591793 0.8447928521657112 1.0 13.95735512450693 -5.805794943441391 3.6379020383387295 0.8047598765606238 1.0475017539768166 0.48895023289121986 0.10206625536737775 0.21336284168368924 5.736117506277984 0.020100018729091552 0.07690492756048116 1.563885872973335e-06 5.805794943441391 0.2427418774161928 TPGS(ph)RQASPT(ph)EVVER ddPTM_A549_PD325901_60min_R1 1 TPGSRQASPTEVVER 15 1 Q8TB72-4;Q8TB72-3;Q8TB72;A0A0A0MR59;Q8TB72-2;C9JW01;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 2 T(0.458)PGS(0.542)RQAS(0.241)PT(0.758)EVVER 40.81 0.053194000000000005 29721000.0 545.89 634.66 856.57 691.92 736.58 817.15 560.84 768.89 523.54 819.77 605.66 True False 601.3083509370222 688.1450255394634 914.7019911738483 734.658326935666 684.8451618630509 810.4954013252193 582.183073103424 753.5538857674638 501.53743445939244 768.0095822971762 531.1676595950698 1.132050003562761 1.2955326121776007 1.722058891671157 1.383100634356627 1.289320141186938 1.5258749034967454 1.0960438998625128 1.4186742587866283 0.9442168125253226 1.4458891998105838 1.0 9.053023499934408 -8.763752878084878 24.99418674077007 0.9736579157123123 1.3633299201082845 0.07102494457242559 0.2170317324394943 32.61341216650599 352342.16636867455 0.027554100142495812 0.030023327502492782 1.722848630139005e-09 8.763752878084878 0.38967200439597216 TPGT(ph)PGTPSYPR ddPTM_A549_MK2206_60min_R1 1 TPGTPGTPSYPR 12 0 A0A669KB77;P11137-3;P11137;P11137-2;P11137-4 A0A669KB77;P11137-4 MAP2 Microtubule-associated protein 2 1 T(0.031)PGT(0.921)PGT(0.04)PS(0.008)YPR 69.86399999999999 0.003588 2801800.0 1474.8 1608.9 1459.4 1672.7 1897.3 1591.7 1433.2 1332.0 2628.7 2059.3 2611.4 True False 1723.710184601822 1690.7861378324753 1666.3648648333356 2082.511575090356 1618.2096833381127 1760.132637515051 1693.5938883587119 1520.8150790789173 2033.3036471713158 1594.1026997540355 1962.9173090265 0.8781369325520331 0.8613639148513154 0.8489225996278782 1.0609267978400823 0.824390144147568 0.8966921986071745 0.8627943115946346 0.7747728710147034 1.0358580251043399 0.8121089423500083 1.0 10.938783682952588 -8.786741649697644 24.99941789513139 1.0169329813261268 0.8793029594321436 0.0 0.09112829781948431 138.03092431593922 136378.12349634522 0.011334041061388831 0.012068235026789205 1.6340236963170998e-09 8.786741649697644 -0.1376300218939831 TPGVLLPGAGGAAGFGMTSPPPPT(ph)SPSR ddPTM_A549_MK2206_60min_R1 1 TPGVLLPGAGGAAGFGMTSPPPPTSPSR 28 0 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80;Q6ZTU2-4;Q6ZTU2-5;Q6ZTU2-2;Q6ZTU2-6;Q6ZTU2 Q96L91-4 EP400;EP400NL E1A-binding protein p400;EP400 N-terminal-like protein 1 TPGVLLPGAGGAAGFGMT(0.002)S(0.002)PPPPT(0.559)S(0.338)PS(0.1)R 80.721 1.105e-06 2423800.0 1358.0 1474.4 1461.7 1277.2 1598.9 1512.1 1267.2 1397.7 2059.1 1683.1 1889.9 True False 1587.1972000876556 1549.4406623284244 1668.9910394181752 1590.1140573356872 1363.7039280500217 1672.109418349255 1497.4338370975152 1595.8282552767305 1592.7171377070265 1302.8865410362837 1420.5856714134866 1.1172836894155 1.0907055403330421 1.1748612371667275 1.1193369673745333 0.959958948968655 1.1770563732953196 1.054096114884479 1.1233593914043052 1.121169366802263 0.9171474605540038 1.0 10.472270123578769 -10.769777635529342 0.8914963729451155 0.9963225134881698 1.1042062171070484 0.41654526506925826 0.06222149481064436 0.5963575785829538 0.7948879289073668 0.043699046234758954 0.009686222423460206 1.6991133981264536e-11 10.769777635529342 0.10788370361887856 TPGVVASAPTKPQS(ph)PAQNATSSQDSSQDTLTEQITLENQVHQR ddPTM_A549_MK2206_60min_R1 2 TPGVVASAPTKPQSPAQNATSSQDSSQDTLTEQITLENQVHQR 43 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 TPGVVAS(0.004)APT(0.067)KPQS(0.928)PAQNATSSQDSSQDTLTEQITLENQVHQR;TPGVVAS(0.001)APT(0.014)KPQS(0.982)PAQNAT(0.001)S(0.001)S(0.001)QDSSQDTLTEQITLENQVHQR 143.95 8.841399999999999e-41 43036000.0 559.05 637.69 901.38 650.81 867.17 1076.77 655.69 676.63 1263.1399999999999 1297.05 1437.33 True False 653.403972539767 670.1456972057873 1029.2092379494802 810.2584792159711 739.610441733153 1190.713086697921 774.8203856111668 772.5443745924687 977.0408068200929 1004.0455041596521 1080.4012927100632 0.6047789621768943 0.6202748013423821 0.9526175550640322 0.7499606717273822 0.684570119198881 1.1021026119944315 0.7171598098217916 0.7150531749685614 0.9043313937262123 0.9293264557663742 1.0 10.077351555820496 -3.1704704414732254 0.09900229404899247 1.1261910265199253 1.2200213307991971e-12 0.30208070168534984 0.13317577524686391 67.73982834397366 0.5923146960355763 0.9790167941929225 10.338248430570951 0.0006753510175121173 3.1704704414732254 -1.1261910265187054 TPGVVASAPTKPQS(ph)PAQNATSSQDSSQDTLTEQITLENQVHQR ddPTM_A549_PD325901_60min_R1 2 TPGVVASAPTKPQSPAQNATSSQDSSQDTLTEQITLENQVHQR 43 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 TPGVVAS(0.003)APT(0.064)KPQS(0.933)PAQNATSSQDSSQDTLTEQITLENQVHQR;TPGVVAS(0.002)APT(0.043)KPQS(0.848)PAQNAT(0.034)S(0.034)S(0.034)QDS(0.003)S(0.003)QDTLTEQITLENQVHQR 189.71 5.0876999999999986e-82 93323000.0 972.6500000000001 954.9499999999999 1037.43 1217.39 1688.46 1455.35 1307.3 1377.3899999999999 1631.37 1756.13 1365.56 True False 1071.392711972914 1035.4269878973157 1107.8362383733784 1292.5854154067085 1569.8683944707807 1443.4981121197545 1357.0500168820097 1349.9168759084484 1562.8091921419912 1645.24765209698 1197.6047769980573 0.8946129245229721 0.8645815445832973 0.9250432694083813 1.0793088339600079 1.3108401240731917 1.2053209371275713 1.1331367767951137 1.1271806040154415 1.304945690062596 1.3737818048964319 1.0 10.225936165795021 -6.310069074130855 3.1907105576486314 1.1600646913380428 0.8850250433816408 0.6110085154050015 0.10498922532304353 0.1586943991249962 3.231290342451979 0.016711010115279718 0.04430031734936929 4.897009267001922e-07 6.310069074130855 -0.275039647956402 TPHDILEDINAS(ph)PEMR ddPTM_A549_MK2206_60min_R1 5 TPHDILEDINASPEMR 16 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR 124.63 1.1587000000000001e-08 53961000.0 3227.0999999999995 3206.05 3455.0200000000004 3383.95 4227.14 3508.1200000000003 2916.04 3304.08 4934.049999999999 4669.54 5766.9400000000005 True False 3771.7555849800224 3369.2242508532613 3944.993788746382 4213.017901911289 3605.333305658497 3879.346929898409 3445.8467221668543 3772.443458320625 3816.495553058787 3614.687670863623 4334.849638552991 0.8701006723359074 0.7772413190271432 0.9100647352703228 0.9718948183212256 0.8317089648493523 0.8949207592799846 0.7949172426928992 0.8702593568112545 0.8804216688661813 0.833866909411473 1.0 12.081766236707557 -10.373193740807055 0.6753842356870324 1.0040290508089424 0.8648904776731059 0.0 0.07011211659964757 0.5249616363927965 0.42326201649618667 0.03914542595389825 0.010780259258806994 4.234540190819069e-11 10.373193740807055 -0.13913857313583655 TPHDILEDINAS(ph)PEMR ddPTM_A549_PD325901_60min_R1 4 TPHDILEDINASPEMR 16 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR 180.08 1.3810999999999997e-29 104372000.0 1633.3299999999997 1683.9900000000002 1933.1100000000001 2334.44 2336.69 2310.4 1832.56 2003.5300000000002 1904.53 2092.9300000000003 2311.55 True False 1799.1444592060038 1825.9057472634204 2064.3024693347616 2478.633056902092 2172.5689555428776 2291.5848684106786 1902.2990736153095 1963.5680224111218 1824.4892272814793 1960.7820426183325 2027.2440041227476 0.8874829352298667 0.9006837576286468 1.0182802194193936 1.2226614319052702 1.0716859692886436 1.1303942020547841 0.9383670982608204 0.9685898778922863 0.8999850158989585 0.9672156082991227 1.0 10.985304030275868 -7.804658589855084 24.997721318858225 0.9520270342586955 1.041221866015776 0.17225578852030732 0.09116141824617094 197.91993630302065 114474.8823846155 0.015645885275717187 0.021617977680181952 1.5679832179675456e-08 7.804658589855084 0.08919483175708043 TPHS(ph)PPLAK ddPTM_A549_MK2206_60min_R1 2 TPHSPPLAK 9 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 TPHS(1)PPLAK;T(0.011)PHS(0.989)PPLAK 83.182 0.00044686 78137000.0 5921.2 5871.7 5748.7 4899.799999999999 7725.700000000001 5941.5 5465.0 6046.4 8924.4 9255.1 9720.5 True False 6920.553800558929 6170.544449941547 6563.952102554061 6100.251219960379 6589.25976417291 6570.225586351492 6457.919759894195 6903.495716323401 6903.03764933834 7164.366482053895 7306.631577847928 0.9471606343941713 0.8445128763094142 0.898355423100091 0.8348924062977221 0.9018190795537127 0.8992140244584037 0.8838436276810729 0.9448260313621472 0.9447633394116661 0.9805293185678954 1.0 12.834990748853055 -8.933974901412576 0.5355386754967033 0.9937799093623201 0.878219618375138 0.6332093440438923 0.030207189022794123 0.291288844054396 0.19388203851284252 0.011036531052858688 0.009388969537434934 1.1641933080991033e-09 8.933974901412576 -0.11556029098718212 TPHS(ph)PPLAK ddPTM_A549_PD325901_60min_R1 2 TPHSPPLAK 9 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 T(0.015)PHS(0.985)PPLAK;T(0.029)PHS(0.971)PPLAK 73.435 0.00068637 108717000.0 7223.6 6768.6 6711.3 7652.6 8325.8 7421.0 6719.0 6787.4 8814.6 9446.0 8673.8 True False 7956.934554266739 7339.013676403767 7166.769176325394 8125.283721684408 7741.024530450719 7360.56583642471 6974.695221777877 6652.019982387707 8444.153015597203 8849.577947935559 7606.977587748432 1.0460047321661545 0.964773931794378 0.9421309703696217 1.0681356199564391 1.0176215771843706 0.9676071411436015 0.9168812634614713 0.8744629395387269 1.1100536209278573 1.1633500750926915 1.0 12.89310763914054 -8.783688085290537 24.996169092433906 1.0519697533125252 0.9756667890643065 0.33872695780181905 0.06656817569317072 262.59709433541036 295023.5219844798 0.011459398197958328 0.01220388681603219 1.645553151900105e-09 8.783688085290537 -0.0763029642482187 TPHVQAVQGPLGS(ph)PPK ddPTM_A549_MK2206_60min_R1 4 TPHVQAVQGPLGSPPK 16 0 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK 149.73 1.1116e-14 383281700.0 11524.7 12978.1 11855.4 11231.599999999999 17586.3 13857.6 13205.9 13511.1 19621.7 19177.5 20031.5 True False 13469.787608137107 13638.629856052992 13536.673988313776 13983.342504205679 14999.378566430743 15324.002034069585 15605.24109006162 15426.339801008384 15177.416279416231 14845.289430647803 15057.125708724952 0.8945789434654151 0.9057923882610608 0.8990211179860085 0.9286860437183531 0.9961647964285277 1.0177242543170102 1.0364023912624345 1.024520887945399 1.007988946430963 0.985931160954949 1.0 13.878158776283549 -6.6991318585154005 2.647676838377823 1.0092685644855208 0.9009738429618465 0.940001726029127 0.012670058381765808 0.04719022010317763 0.6721680654686655 0.0019097240079822542 0.004272171721980477 1.999254772834015e-07 6.6991318585154005 -0.10829472152367436 TPHVQAVQGPLGS(ph)PPK ddPTM_A549_PD325901_60min_R1 6 TPHVQAVQGPLGSPPK 16 0 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK 141.0 3.3851e-14 729676500.0 21664.700000000004 21887.0 22252.3 23292.8 27624.699999999997 26271.4 24044.2 23811.899999999998 26541.8 27138.100000000002 29254.800000000003 True False 23864.0843952908 23731.49430243318 23762.47489195025 24731.543354213012 25684.43637204136 26057.454428654895 24959.215188491104 23336.952974425818 25426.340447595794 25424.59573458287 25656.645061456675 0.9301326942056507 0.9249648286277461 0.9261723360568296 0.9639429978070898 1.0010832012727353 1.0156220490340082 0.9728167938054652 0.9095870843021611 0.991023588107127 0.9909555857237777 1.0 14.647044911253682 -2.0000000001076685 0.233910252974045 0.9981047256666957 0.5176918004218658 0.3368176810894341 0.02893593269062307 34.80714635554477 0.41378861309336473 0.01673031473525971 6.535792408974423 0.009999999997520841 2.0000000001076685 -0.4804129252448299 TPHVQAVQGPLGS(ph)PPKR ddPTM_A549_MK2206_60min_R1 5 TPHVQAVQGPLGSPPKR 17 1 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR 141.79 7.7432e-17 708011400.0 7206.599999999999 9072.099999999999 8777.4 8078.6900000000005 10976.1 8655.9 7683.000000000001 7664.0 11454.3 10926.6 12005.199999999999 True False 8422.897895546168 9533.831139927905 10022.167304774635 10057.969412666176 9361.530229951746 9571.861592678602 9078.90164963716 8750.395470015636 8859.919338758486 8458.273471146727 9023.977513335725 0.9333908338200892 1.0564998777799162 1.1106152791231776 1.1145827211783725 1.0374062009925427 1.06071425582934 1.0060864664412414 0.9696827653974328 0.9818197491810243 0.9373110093245474 1.0 13.139547757381123 -7.848818285091297 3.9872347315365437 0.9894778136144484 1.0573755546382835 0.35926514826897227 0.047881055365392416 0.19992619828795893 6.067578857558886 0.007124376606117195 0.010069825493236685 1.4163862919013098e-08 7.848818285091297 0.06789774102383506 TPHVQAVQGPLGS(ph)PPKR ddPTM_A549_PD325901_60min_R1 5 TPHVQAVQGPLGSPPKR 17 1 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR 129.75 1.1011e-12 1137858800.0 14507.5 15280.7 16723.0 15481.2 18517.2 17278.1 15880.599999999999 18889.199999999997 17211.699999999997 19872.5 20954.6 True False 15980.290720142977 16568.458216621322 17857.923343568254 16437.438563643824 17216.615752872047 17137.392882135806 16484.944923197767 18512.440087709252 16488.352104299047 18617.746958537937 18377.317042153758 0.869566035318839 0.9015711150118764 0.9717372401317275 0.8944416927639516 0.9368405471473717 0.9325296419943225 0.8970267469067829 1.0073527079739415 0.8972121483499568 1.0130829715693908 1.0 14.165638538313907 -10.95353336296802 0.9794233655542899 1.0044678897723118 0.9228821734969463 0.4199216235445291 0.03753028743662224 0.5354189126594493 0.8247641163861629 0.033209031641007046 0.006164818611607937 1.1129268932798373e-11 10.95353336296802 -0.08158571627536548 TPHVQAVQGPLGS(ph)PPKRGPLPTEEQR ddPTM_A549_MK2206_60min_R1 4 TPHVQAVQGPLGSPPKRGPLPTEEQR 26 2 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(0.855)PPKRGPLPT(0.145)EEQR;TPHVQAVQGPLGS(0.986)PPKRGPLPT(0.014)EEQR;TPHVQAVQGPLGS(0.741)PPKRGPLPT(0.259)EEQR;TPHVQAVQGPLGS(0.999)PPKRGPLPT(0.001)EEQR 128.43 2.2331e-24 52000000.0 3737.23 4824.94 4187.08 4102.9400000000005 6357.04 4796.82 4466.34 4155.39 7476.26 6757.07 6761.1 True False 4367.983057498961 5070.508837014996 4780.870904650104 5108.160484187973 5421.927837119969 5304.416308528585 5277.816164758614 4744.429257848159 5782.899047133956 5230.6431940110715 5082.132273132826 0.8594784280981267 0.9977128820162201 0.9407214625098664 1.0051215138954073 1.066860826465203 1.0437383412019567 1.0385042893630079 0.9335509197448547 1.137888338268132 1.0292221675660356 1.0 12.311218209701009 -3.5080551718482633 0.4658059501397871 1.055703953012522 9.242515095259285e-15 0.43110878025640953 0.05342397828319576 13.860616299072507 0.5616107005460687 0.012486465120666226 11.60429094118 0.00031041652165249344 3.5080551718482633 -1.0557039530125127 TPHVQAVQGPLGS(ph)PPKRGPLPTEEQR ddPTM_A549_PD325901_60min_R1 4 TPHVQAVQGPLGSPPKRGPLPTEEQR 26 2 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(0.94)PPKRGPLPT(0.06)EEQR;TPHVQAVQGPLGS(0.656)PPKRGPLPT(0.344)EEQR;TPHVQAVQGPLGS(0.998)PPKRGPLPT(0.002)EEQR;TPHVQAVQGPLGS(0.827)PPKRGPLPT(0.173)EEQR 135.32 9.6372e-25 91800000.0 5092.99 5934.86 5911.08 6667.880000000001 6624.99 10171.3 8315.15 8722.58 8008.2 7181.18 8143.55 True False 5610.026595538921 6435.011480592978 6312.241435011623 7079.739803745787 6159.673557374753 10088.468305083761 8631.587583474675 8548.601299168364 7671.643203265663 6727.759069252152 7141.944976216744 0.7855040348561582 0.9010166701118656 0.8838266685100346 0.9912901635789543 0.8624644376128583 1.4125659520871665 1.208576600942539 1.196957037282687 1.0741672231882011 0.9420065670704738 1.0 12.80210130365397 TPIKETLPISST(ph)PSK ddPTM_A549_MK2206_60min_R1 2 TPIKETLPISSTPSK 15 1 A0A0D9SFF0;Q08050-2;Q08050;Q08050-3 A0A0D9SFF0 FOXM1 Forkhead box protein M1 1 TPIKETLPIS(0.01)S(0.168)T(0.817)PS(0.005)K;TPIKETLPIS(0.003)S(0.145)T(0.851)PS(0.001)K 113.47 5.0361e-07 4654800.0 2538.7 2425.2 3177.1 2779.3 3790.7 2846.0 2539.1 2795.5 4335.0 4239.5 3863.8 True False 2967.1704947441303 2548.632321133273 3627.660553694659 3460.2286247675174 3233.093051509927 3147.161830978096 3000.4216033572466 3191.770685859695 3353.129421572512 3281.7940055393747 2904.3118245449127 1.0216432235918975 0.8775339822653607 1.2490602844489986 1.191410851797814 1.1132045203226524 1.083617056674428 1.0330921005107272 1.0989765833287632 1.1545349205393696 1.129973020735682 1.0 11.503980642807543 -11.048294116885579 1.3649714106510744 1.0002543571984395 1.0990615493564908 0.0 0.0998310317683464 0.7529820749116096 2.512147000575076 0.06759367036689959 0.015247990557166732 8.94758603703217e-12 11.048294116885579 0.09880719215805134 TPIKETLPISST(ph)PSK ddPTM_A549_PD325901_60min_R1 2 TPIKETLPISSTPSK 15 1 A0A0D9SFF0;Q08050-2;Q08050;Q08050-3 A0A0D9SFF0 FOXM1 Forkhead box protein M1 1 TPIKETLPIS(0.004)S(0.163)T(0.819)PS(0.013)K;TPIKETLPIS(0.001)S(0.164)T(0.833)PS(0.003)K 132.79 8.150800000000001e-10 15622100.0 7016.1 7364.7 9076.9 9501.7 10390.6 9525.3 8458.6 9608.5 9309.599999999999 8615.3 8685.400000000001 True False 7728.369307020165 7985.349115416894 9692.9130178338 10088.598429073612 9660.800101624021 9447.729114903144 8780.496651723524 9416.850929777567 8918.349887006065 8071.328487703705 7617.150861286895 1.0146010559274232 1.0483380545869605 1.2725116246675219 1.3244582669810971 1.268295754876497 1.2403232241230653 1.1527271563373087 1.2362694531412521 1.1708248988913075 1.059625657242146 1.0 12.895035753911415 -10.275478888472406 0.697599932339984 0.9991306730054982 1.1999093928699716 0.31300178528080624 0.09116888542102555 0.6088593439664489 0.5479752040233612 0.06454507389734775 0.020304832142912902 5.3029937043241396e-11 10.275478888472406 0.20077871986447338 TPIS(ph)PLK ddPTM_A549_MK2206_60min_R1 1 TPISPLK 7 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.212)PIS(0.788)PLK 78.516 0.016738 509430000.0 4479.2 5286.0 5096.6 4002.9 6271.4 4761.9 4413.0 5572.8 6799.5 5864.3 6287.3 True False 5235.179454074097 5555.034821668514 5819.374516999846 4983.610679697012 5348.885367673347 5265.801097306602 5214.784977202762 6362.761465984231 5259.424106570311 4539.550557066766 4725.989889347592 1.1077424151655975 1.1754224938545879 1.231355684894026 1.054511498412237 1.1318021182672788 1.1142218287804102 1.103427027839589 1.346334125751291 1.1128724837996549 0.9605502050055034 1.0 12.206400827515173 -9.912056098708964 1.0630837969230589 1.0164752759634315 1.1533930460029962 0.4079610235926784 0.07744259209623697 0.35875719666298417 0.8232118148309456 0.024943422941718658 0.014472571740455433 1.2244580232950822e-10 9.912056098708964 0.13691777003956473 TPIS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 TPISPLK 7 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.255)PIS(0.745)PLK;T(0.289)PIS(0.711)PLK 76.345 0.017721999999999998 527170000.0 11323.7 11431.400000000001 11299.0 10363.0 13483.2 10589.7 11639.5 11839.5 11785.5 11468.0 12670.1 True False 12473.273687932644 12394.764196501796 12065.818086406609 11003.098973919385 12536.186546514824 10503.46099420385 12082.447541878792 11603.351884591932 11290.196420180251 10743.908522858881 11111.75802238136 1.1225292759983534 1.1154638331338926 1.0858604067964381 0.990221254976655 1.1281911036277403 0.9452564547435001 1.087356970655972 1.0442408718062794 1.0160585208424697 0.9668954724552538 1.0 13.439799467160702 -2.0000000000001084 0.2390771223761911 1.0017860853758263 1.7772781976692706 0.41045564301469906 0.04815589413713531 30.225117136245217 0.3620263687217001 0.021787513555626296 9.433378192181213 0.009999999999997506 2.0000000000001084 0.7754921122934444 TPIS(ph)PLKTGVSKPIVK ddPTM_A549_MK2206_60min_R1 1 TPISPLKTGVSKPIVK 16 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.186)PIS(0.813)PLKT(0.001)GVSKPIVK 75.55 0.00010233 9030700.0 1697.0 2005.6 2369.0 1623.2 2596.4 1869.0 1877.1 1556.0 3146.0 2905.5 2770.4 True False 1983.4121123333941 2107.676473389779 2704.959822386027 2020.8840728682158 2214.472999430283 2066.776339458209 2218.144772424042 1776.5677650501486 2433.436023129671 2249.1455320426135 2082.4332208497412 0.9524493234525229 1.012121998577096 1.2989419277907326 0.9704436390251159 1.063406488745249 0.992481448511879 1.0651697015853998 0.8531211216104286 1.1685541695962296 1.0800564981021792 1.0 11.024054516870612 -11.42147766102787 2.2288552560611175 0.9991963732926459 1.0666179343973743 0.0 0.11549561520405557 0.9805908911623511 8.815701285913041 0.09228812677526377 0.01662210699642982 3.788980227703778e-12 11.42147766102787 0.06742156110472841 TPITSVPLGPLASS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 TPITSVPLGPLASSPTK 17 0 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TPITSVPLGPLAS(0.124)S(0.868)PT(0.008)K;TPITSVPLGPLAS(0.094)S(0.906)PTK 155.56 4.3694e-22 21088600.0 3812.3999999999996 4243.1 3591.3 3841.8 4835.8 3892.0 4315.3 4018.6 6559.7 5326.6 5104.3 True False 4455.839915768908 4459.055666254573 4100.600341973383 4783.0411724649575 4124.460225945527 4303.848856699492 5099.334151852045 4588.248856446351 5073.938423688397 4123.3173605156335 3836.7614384866183 1.1613544358198307 1.1621925777103865 1.068766043371942 1.2466350199640226 1.0749847995689794 1.121740021031152 1.3290725090959625 1.1958650361790937 1.3224534558733925 1.0746869271450052 1.0 11.905673348739619 TPITSVPLGPLASS(ph)PTK ddPTM_A549_PD325901_60min_R1 2 TPITSVPLGPLASSPTK 17 0 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TPITSVPLGPLAS(0.326)S(0.667)PT(0.007)K;TPITSVPLGPLAS(0.293)S(0.707)PTK 173.03 6.2423e-30 30383000.0 8007.8 7343.2 6952.1 7264.5 9890.4 8431.6 8048.0 8452.0 9452.9 8656.3 9099.9 True False 8820.745960969218 7962.037234962645 7423.911312373431 7713.2116661234595 9195.732424027694 8362.935845088066 8354.271044034578 8283.41822953427 9055.62748634524 8109.7397407066 7980.669989018884 1.1052638403926298 0.9976652644349564 0.9302365995071176 0.9664867331610708 1.1522506802913406 1.047898967955719 1.046813244443105 1.037935191021801 1.134695144493565 1.0161727965027136 1.0 12.962294152570928 -6.720862028216442 24.99988964754949 1.065612704647778 0.9947756372523663 0.20501353470647876 0.0584983943443347 191.25815952642324 117834.10846295369 0.009350724010419283 0.019464909293859786 1.9016823327971348e-07 6.720862028216442 -0.07083706739541162 TPKAS(ph)PPDPK ddPTM_A549_MK2206_60min_R1 1 TPKASPPDPK 10 1 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 T(0.287)PKAS(0.713)PPDPK 58.486999999999995 0.0030941999999999996 10438000.0 1893.7 2284.0 2570.8 2030.6 2798.7 2261.1 2245.8 2448.5 3478.1 3330.9 3705.1 True False 2213.310263480112 2400.2458442472357 2935.3780968298875 2528.097091157097 2387.014937415471 2500.3681012032926 2653.8327898939388 2795.5823732167655 2690.3159033843926 2578.4473765894813 2785.021414442091 0.7947192980286268 0.8618410730346447 1.0539876216420105 0.9077478105006017 0.857090335118177 0.8977913377029376 0.9528949314831633 1.0037920565780605 0.9659946919737885 0.9258267685909368 1.0 11.443472705365862 -7.915316143992998 3.5150347440588696 0.9848672139473631 0.9000335678942725 0.2561321426969443 0.06227239724261842 0.22967075498355047 5.658456299974964 0.009684872347709763 0.013571121769470578 1.21530100209348e-08 7.915316143992998 -0.08483364605309063 TPKAS(ph)PPDPK ddPTM_A549_PD325901_60min_R1 2 TPKASPPDPK 10 1 Q5T670;Q7L590-2;Q7L590 Q5T670;Q7L590 MCM10 Protein MCM10 homolog 1 T(0.124)PKAS(0.876)PPDPK;T(0.129)PKAS(0.871)PPDPK 49.928999999999995 0.007859999999999999 42192000.0 4876.1 5133.7 5311.1 5685.7 6068.8 6654.4 6107.299999999999 5818.3 5655.4 6029.200000000001 6889.900000000001 True False 5371.118082404906 5566.334915721718 5671.543184238795 6036.8927758384125 5642.548424223416 6600.208772659288 6339.716643542796 5702.249442131948 5417.723205183263 5648.51528305029 6042.4859786746265 0.888892105229679 0.9211994757400581 0.9386108969478826 0.9990743540231697 0.9338124149790855 1.09230022145736 1.049190129015966 0.9436926229132423 0.8966050106369631 0.9347998990788307 1.0 12.560926504945861 -5.727198769431921 1.9738889976406018 0.9680481396318383 0.8925818872839824 0.21254759274927315 0.05422729960982902 0.5995579806008224 4.185183192778293 0.008975851963198287 0.05852245743591163 1.8741365503121206e-06 5.727198769431921 -0.07546625234785598 TPKEEAQS(ph)LEDLAGFK ddPTM_A549_MK2206_60min_R1 1 TPKEEAQSLEDLAGFK 16 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.026)PKEEAQS(0.974)LEDLAGFK 53.778999999999996 0.0042194 644210.0 327.02 472.83 303.09 419.54 649.67 542.11 402.24 611.36 649.24 738.96 650.63 True False 382.21298112861905 496.895027379781 346.0727195301735 522.3273188338661 554.1044036126448 599.4757203765062 475.32180132110517 698.0221522114773 502.18817662323795 572.0284227699908 489.0606145255076 0.781524763549906 1.0160193084897553 0.7076274581340748 1.068021638464251 1.1329973977770493 1.2257697769388454 0.9719077496810247 1.4272712450760456 1.0268424029820247 1.1696472907044038 1.0 8.933869474698513 -6.2918641692374875 23.397781175068573 1.06641097326181 0.8531534093672779 0.3952557543624927 0.14723209082982952 277.13794506699907 213128.8952933975 0.020360102113057294 0.04732064010074601 5.106646914549101e-07 6.2918641692374875 -0.213257563894532 TPKEEAQS(ph)LEDLAGFK ddPTM_A549_PD325901_60min_R1 1 TPKEEAQSLEDLAGFK 16 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.417)PKEEAQS(0.583)LEDLAGFK 57.989 0.0021523000000000002 1705400.0 1086.6 847.05 875.8 1101.4 1187.2 1046.1 891.4 863.6 936.21 1228.2 1071.2 True False 1196.9108320873588 918.4338762222332 935.2370546132311 1169.4309765391113 1103.8151676176576 1037.5809084333496 925.3227147927968 846.3748205189061 896.864349457974 1150.6512423940771 939.4491908962763 1.2740559507486007 0.9776301742790436 0.9955163766983219 1.2448049217259127 1.1749599428198654 1.1044566523533341 0.9849630227580459 0.9009266586428446 0.9546704155467157 1.2248147675727994 1.0 9.875671326913222 -7.750161214355359 4.450938767144752 0.9708970083384362 1.12449740231539 0.15857905537494466 0.11604860526419246 0.15277775764345455 7.247656821257988 0.01358542507736884 0.01979118580177725 1.777619417850945e-08 7.750161214355359 0.1536003939769538 TPLALAGS(ph)PTPK ddPTM_A549_MK2206_60min_R1 2 TPLALAGSPTPK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 TPLALAGS(0.908)PT(0.092)PK;TPLALAGS(0.81)PT(0.19)PK 128.31 8.774800000000001e-08 24344000.0 5353.1 7043.7 7117.2 6467.4 8934.2 7801.8 6345.7 5989.6 9890.2 9311.599999999999 9705.900000000001 True False 6256.572409270419 7402.1942439248 8126.525980534334 8051.9132903326135 7619.991015063171 8627.381297584296 7498.631549928746 6838.644142380695 7650.085491404023 7208.10309281294 7295.657160787435 0.8575748930333692 1.0146028083268466 1.1138853980437344 1.103658397438121 1.0444557422488217 1.182536556673001 1.0278212619738019 0.9373582107362328 1.048580727247103 0.987999152640412 1.0 12.832822220297817 -5.2803546272585224 4.191702025769997 1.0405914102199152 0.8458857500874633 0.4203508428023748 0.06390148521445223 0.154628128535557 5.961480641190622 0.00886279540768623 0.08682018963709698 5.2437909867956864e-06 5.2803546272585224 -0.19470566013245194 TPLALAGS(ph)PTPK ddPTM_A549_PD325901_60min_R1 4 TPLALAGSPTPK 12 0 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 T(0.002)PLALAGS(0.986)PT(0.012)PK;T(0.002)PLALAGS(0.968)PT(0.03)PK;TPLALAGS(0.828)PT(0.172)PK;T(0.001)PLALAGS(0.881)PT(0.117)PK 137.46 2.2235999999999998e-08 50635100.0 20072.6 20752.600000000002 20516.0 21930.699999999997 25117.399999999998 22383.300000000003 22327.5 23141.1 22851.9 23600.6 24898.800000000003 True False 22110.355575332876 22501.494433256044 21908.339132730136 23285.309530766568 23353.240474325947 22201.01782595947 23177.185230576797 22679.532606658253 21891.51411262289 22110.454088296407 21836.405446497574 1.0125455688898304 1.0304578053557412 1.00329420913203 1.066352682808488 1.0694635860075434 1.0166974541828897 1.0614011215062082 1.0386110782851357 1.0025237059396217 1.0125500802991725 1.0 14.414447769171815 -8.767433047527208 7.858724277910302 1.001157988724935 1.0381640455730818 0.3155250529118031 0.020974482278816677 0.09430106409789249 40.23927127209948 0.0035460728521520793 0.003866483498459603 1.7083110594265558e-09 8.767433047527208 0.03700605684814673 TPLALAGS(ph)PTPKNPEDK ddPTM_A549_MK2206_60min_R1 1 TPLALAGSPTPKNPEDK 17 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 TPLALAGS(0.5)PT(0.5)PKNPEDK 91.637 1.4669999999999999e-06 4892000.0 2398.0 2920.5 3081.3 2613.2 3313.9 2727.8 2933.2 2154.0 4059.5 4046.6 4207.2 True False 2802.7237745288626 3069.140975535923 3518.2746731608577 3253.434117311006 2826.429699896784 3016.4539854329055 3466.124472044219 2459.3360963483406 3140.029731689413 3132.4702495142424 3162.4361271870575 0.8862546662790138 0.9704989609595311 1.1125203898711824 1.0287746491831569 0.8937507624575657 0.9538387066542903 1.0960298746420178 0.7776713892197675 0.9929148306569674 0.9905244322833267 1.0 11.626820626154077 TPLALAGSPT(ph)PKNPEDK ddPTM_A549_PD325901_60min_R1 1 TPLALAGSPTPKNPEDK 17 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785 B9EGQ5 WIZ Protein Wiz 1 TPLALAGS(0.427)PT(0.573)PKNPEDK 74.047 0.00021201 3911800.0 3325.7 3715.2 4607.2 3559.6 4669.7 5035.1 4660.5 4848.1 4737.1 4955.1 4974.5 True False 3663.3226157490603 4028.2929424955346 4919.872297344237 3779.4684075618493 4341.716381590442 4994.095814982085 4837.857877823454 4751.400842239129 4538.016160708992 4642.234140357345 4362.6680359536285 0.8396977687870997 0.9233553663257343 1.1277209855983943 0.8663204205349769 0.9951975134962093 1.1447343171253768 1.1089218427699954 1.0891043744520268 1.040192864391763 1.064081452473522 1.0 12.090994985031534 -5.554971506337436 6.601307887063044 1.0320745900515937 0.8590842727366698 0.42589843865946797 0.07529918922894119 0.1105567215419053 14.993464532950547 0.010241284400204753 0.041925802846651296 2.7863039694804686e-06 5.554971506337436 -0.17299031731492398 TPLDLFAHFGPEPGDHSDPLPPSAPS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 TPLDLFAHFGPEPGDHSDPLPPSAPSPTR 29 0 Q8N1G0;F8WCX2;Q8N1G0-2 Q8N1G0 ZNF687 Zinc finger protein 687 1 TPLDLFAHFGPEPGDHSDPLPPS(0.165)APS(0.699)PT(0.136)R 86.936 4.4748e-09 20899000.0 2815.2 2930.4 3034.2 3441.0 3810.3 3333.6 3631.0 3990.7 3479.0 3764.9 3889.1 True False 3100.9970315592946 3177.355092239696 3240.1190581268183 3653.5427549219953 3542.6776728213968 3306.452266851557 3769.1796919594394 3911.102357856414 3332.789728548393 3527.1835714781487 3410.765355036135 0.9091792336229008 0.931566602067246 0.9499683270039815 1.07117974255467 1.0386752837132252 0.969416515847226 1.1050832583349923 1.1466934692770674 0.9771383785247473 1.0341325785633764 1.0 11.735879792246116 -6.061279631482659 6.177606987682754 1.015036612412822 0.9248615651382933 0.39596582379034484 0.05524143489321782 0.21164427686806328 16.521499323688992 0.008563247937985317 0.02335571726115463 8.684011072296901e-07 6.061279631482659 -0.09017504727452874 TPLENVPGNLS(ph)PIKDPDR ddPTM_A549_MK2206_60min_R1 2 TPLENVPGNLSPIKDPDR 18 1 Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9 Q5T321 NBEA Neurobeachin 1 TPLENVPGNLS(1)PIKDPDR;TPLENVPGNLS(1)PIKDPDR 69.398 0.00039259 12126300.0 2302.2 2214.7 1991.45 2224.53 2658.1 2147.2 1898.48 2489.25 3200.1000000000004 3008.6 3489.8 True False 2690.7550766139916 2327.4187702514673 2273.8675552092245 2769.5399498629486 2267.0970111637766 2374.4152788039946 2243.4092416768385 2842.1088105084073 2475.2824595096185 2328.9551704365513 2623.186346419803 1.0257582654341 0.887248736037374 0.8668341684198919 1.0557923014668373 0.8642531302657827 0.9051645461805113 0.8552229790074598 1.0834566954754836 0.9436167060292732 0.887834436015258 1.0 11.357104582355156 -9.803504399051578 0.4014626049069073 1.00253304983999 0.9296360752313414 0.0 0.08190971317746956 2.6021554854863425 0.8608206173014894 0.07658416896380489 0.027553930140875923 1.5721558677158712e-10 9.803504399051578 -0.07289697460864863 TPLENVPGNLS(ph)PIKDPDR ddPTM_A549_PD325901_60min_R1 2 TPLENVPGNLSPIKDPDR 18 1 Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9 Q5T321 NBEA Neurobeachin 1 T(0.002)PLENVPGNLS(0.998)PIKDPDR;TPLENVPGNLS(1)PIKDPDR 95.71 7.508599999999999e-07 25790000.0 5481.5 5604.4 5659.799999999999 5554.3 6943.0 5699.4 6292.4 6093.1 5661.0 6098.1 6999.0 True False 6037.977844732975 6076.702456643511 6043.908063142232 5897.376496269466 6455.347632049692 5652.98597603005 6531.860725333401 5971.568340555519 5423.087856657792 5713.064925291742 6138.167370316502 0.9836776158845013 0.9899864389540389 0.9846437378638293 0.9607715365971489 1.0516734462580866 0.9209566365634252 1.064138582620076 0.9728585065036452 0.8835027671098128 0.9307444031128073 1.0 12.58359226918163 -8.52880412845569 24.988974601407023 0.9441028500348422 0.9933061759275725 0.2263835079438722 0.04459005583244215 215.24384077350024 907737.9240789235 0.00874592257319236 0.00993031269813647 2.9593468633017086e-09 8.52880412845569 0.049203325892730354 TPLGAS(ph)LDEQSSSTLK ddPTM_A549_MK2206_60min_R1 2 TPLGASLDEQSSSTLK 16 0 E9PHV5;P28290-3;P28290 E9PHV5 SSFA2 Sperm-specific antigen 2 1 TPLGAS(1)LDEQSSSTLK;TPLGAS(1)LDEQSSSTLK 205.78 6.0734e-40 32583000.0 7148.2 14067.1 10323.6 6392.0 14374.6 10807.5 7841.4 11809.8 13731.400000000001 13862.8 13892.099999999999 True False 8354.641403289084 14783.055304557907 11787.641714809795 7958.040286947783 12260.115381917472 11951.142476562112 9266.080879274354 13483.875315995647 10621.259824539971 10731.183851867263 10442.308167545005 0.8000761200723372 1.4156884730240074 1.128834882640806 0.7620959043979952 1.1740809776158747 1.1444924134404124 0.8873594545000693 1.2912734521572462 1.0171371744755775 1.0276639685103426 1.0 13.350153019983496 -8.966706936548663 24.999805275596174 1.0075602779678037 1.0822708302629875 0.01902197179136178 0.1882734612261122 542.6253612068042 407460.8479305251 0.03057408829792914 0.03235923652427684 1.0796750450011176e-09 8.966706936548663 0.07471055229518386 TPLGAS(ph)LDEQSSSTLK ddPTM_A549_PD325901_60min_R1 2 TPLGASLDEQSSSTLK 16 0 E9PHV5;P28290-3;P28290 E9PHV5 SSFA2 Sperm-specific antigen 2 1 T(0.005)PLGAS(0.995)LDEQSSSTLK;T(0.006)PLGAS(0.993)LDEQS(0.001)SSTLK 169.67 6.2332e-28 96613000.0 19632.2 19377.6 21052.9 20390.5 24008.0 24481.0 20883.9 19261.3 21611.9 21040.6 26849.0 True False 21625.24649153823 21010.618357693118 22481.67639537213 21649.974874814558 22321.760903103717 24281.63485264967 21678.648242608575 18877.118261302465 20703.62700040674 19712.092925188736 23546.743209833952 0.9183964975040269 0.8922940285397235 0.9547679776786706 0.919446680242929 0.9479765717146549 1.0312099060267834 0.9206644014172969 0.8016870143391512 0.879256499122145 0.8371473179762825 1.0 14.523239911576919 -7.800391720594071 0.00647997556529895 1.8518576021313589 3.0320204435853857e-05 0.0 0.06748281378426027 9027.95941367864 28.69995869252815 4050.346137039001 4149.930915549214 1.5834643108485215e-08 7.800391720594071 -1.851827281926923 TPLKTDT(ph)FR ddPTM_A549_MK2206_60min_R1 2 TPLKTDTFR 9 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL4;H0YA73;H0Y9Y7 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 TPLKT(0.002)DT(0.998)FR;TPLKTDT(1)FR 87.719 0.00045104 53049000.0 11218.9 12382.2 12052.5 12373.2 16277.1 13490.0 10883.599999999999 12137.4 18332.1 17039.3 16862.7 True False 13112.376044229295 13012.401091347681 13761.725732084255 15404.634555454048 13882.760152143983 14917.502846062725 12861.00924039972 13857.913619228571 14179.908620348195 13190.1102956922 12675.226203155835 1.0344885238390948 1.0266010943542687 1.0857183541748476 1.2153340941259616 1.0952672504327774 1.1769022979920165 1.0146571772579198 1.0933070066850779 1.1187104981856442 1.0406212941910395 1.0 13.62972387346518 -10.83205302810406 0.897926029866013 0.995199656612061 1.0982744203188186 0.184275421865693 0.05887815096172921 0.7160011302244482 0.9437962210756582 0.051444458034572337 0.010514126366263522 1.472132741515753e-11 10.83205302810406 0.10307476370675761 TPLKTDT(ph)FR ddPTM_A549_PD325901_60min_R1 1 TPLKTDTFR 9 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL4;H0YA73;H0Y9Y7 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 TPLKT(0.001)DT(0.999)FR 90.697 0.00041754 40074000.0 10018.0 10267.0 12627.0 12954.0 12941.0 12051.0 12291.0 13715.0 15781.0 14048.0 14547.0 True False 11035.019985138182 11132.236122039638 13483.944152319333 13754.139159331438 12032.068804026378 11952.86065149632 12758.740730893278 13441.443565790643 15117.779449905776 13161.006882553322 12757.811221030744 0.8649618491726379 0.8725819757928844 1.056916732714432 1.0780955228948903 0.9431138771039338 0.9369052766506298 1.0000728580981824 1.0535853943059572 1.1849822189706585 1.0316038272190393 1.0 13.63909321559376 -8.237384312180927 3.030521969484075 1.0882236547663828 0.9647953355648428 0.3017575161981588 0.0751910294984737 0.2636390878320536 4.912353811170199 0.015218922215515662 0.019484092898871434 5.789161801098801e-09 8.237384312180927 -0.12342831920154007 TPLNPEKYS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 TPLNPEKYSPGR 12 1 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 T(0.005)PLNPEKY(0.001)S(0.995)PGR 45.618 0.013125999999999999 7704200.0 2481.9 2632.7 2519.1 3191.4 3076.3 3282.8 2649.7 3092.5 3187.8 3161.2 3291.8 True False 2733.8606609217886 2854.5668684614525 2690.0612745788885 3388.5255298047214 2860.2313006588633 3256.06596520887 2750.5357834714755 3030.817661480682 3053.827851873115 2961.6012925062337 2886.9294684394745 0.9469786812628896 0.9887899582127597 0.931807064906576 1.1737472518289074 0.9907520540170859 1.1278647437718428 0.9527547567548554 1.049841256814281 1.0578117287790398 1.025865482646212 1.0 11.495320145690918 TPLNPEKYS(ph)PGRK ddPTM_A549_MK2206_60min_R1 2 TPLNPEKYSPGRK 13 2 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 TPLNPEKY(0.001)S(0.999)PGRK;TPLNPEKY(0.003)S(0.996)PGRK 66.335 0.0010201000000000001 29885000.0 5738.700000000001 6383.1 6866.1 6407.299999999999 8045.6 7246.9 6590.9 5792.4 9237.5 9536.9 9014.7 True False 6707.252262255538 6707.972525575533 7839.816224771928 7977.088787634628 6862.102897941872 8013.762147897102 7788.38121600853 6613.490438481026 7145.220999256304 7382.507666335296 6776.101196936966 0.989839447097905 0.9899457417501042 1.1569803928423914 1.177238732981224 1.0126919150858877 1.1826508954027433 1.1493897434012865 0.9760023125791797 1.0544737735744256 1.08949194408024 1.0 12.726239705263268 -8.264622680135556 24.978472011557912 1.0227133722257131 1.0959891643409727 0.14923106551809495 0.07280149035794159 351.08475762528093 2754861.223540406 0.01172618976477152 0.014490828971155242 5.43722518498836e-09 8.264622680135556 0.07327579211525959 TPLNPEKYS(ph)PGRK ddPTM_A549_PD325901_60min_R1 2 TPLNPEKYSPGRK 13 2 A0A494C1D7;Q03001-13 A0A494C1D7 DST Dystonin 1 TPLNPEKYS(0.999)PGRK;TPLNPEKY(0.001)S(0.999)PGRK 61.226000000000006 0.0015792999999999998 50828000.0 9671.2 9325.3 10557.3 10570.3 12099.3 11185.9 11099.1 11335.400000000001 11308.599999999999 11814.8 11467.5 True False 10653.013104438856 10111.17575814319 11273.781864202176 11223.203424106934 11249.486908319013 11094.80573907333 11521.482324160565 11109.306554550734 10833.338868715824 11068.81151167362 10057.070198471853 1.0592561147736201 1.005379853039065 1.1209807271619918 1.11595158456906 1.1185650180733893 1.1031846770602396 1.1456102121979048 1.1046265299250637 1.0771863629192848 1.1006000050944758 1.0 13.295922463445597 -10.08720514419004 0.7952405639710111 1.004825865364318 1.0964946220143492 0.0 0.04552667879521242 0.3976001641881096 0.4999150733283401 0.01873543147730422 0.007883610701654173 8.180782678042034e-11 10.08720514419004 0.09166875665003116 TPLRPLDPTR ddPTM_A549_PD325901_60min_R1 2 TPLRPLDPTR 10 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JF13;C9K073;C9J2Z7;C9J6B6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 48.74100000000001 0.030889 2221390.0 1114.04 1181.4099999999999 834.05 1013.11 1332.6599999999999 1071.62 1122.48 1115.8600000000001 1259.1399999999999 1099.21 1298.23 False True 1227.1365206870976 1280.971566858756 890.6536485500865 1075.68750376025 1239.0585590274156 1062.893082014478 1165.1965906446242 1093.6032969247642 1206.2227245772988 1029.8056930076484 1138.5559401580222 1.077800815405505 1.1250844351845968 0.7822660416900298 0.9447823034597258 1.0882720078342787 0.9335448918451537 1.0233986311493 0.9605178440094749 1.059432112233225 0.9044840544810823 1.0 10.152989461165978 -8.759844208800155 24.99992519256521 1.028065162979326 0.9901449760818364 0.0 0.09677693091845681 130.46294266207687 2044662.852730342 0.015302644528160518 0.01690790071134258 1.738424328822469e-09 8.759844208800155 -0.03792018689748966 TPLS(ph)PSPMK ddPTM_A549_MK2206_60min_R1 1 TPLSPSPMK 9 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.204)PLS(0.772)PS(0.024)PMK 83.883 0.0013976 7891500.0 2355.7 2790.9 2942.1 2161.8 3423.6 2406.0 2450.3 2402.0 3806.2 3364.1 4054.7 True False 2753.2845686645705 2932.944889102279 3359.334020026142 2691.4410970468884 2919.9929752154976 2660.6013230264566 2895.4877928030633 2742.490855816489 2944.101777252432 2604.1474735310803 3047.8060859729453 0.9033660577476158 0.9623134826722418 1.1022138302981137 0.883074913930328 0.9580638967335594 0.8729562340830873 0.9500236272015784 0.8998245880662742 0.9659741119365184 0.8544334514968865 1.0 11.573555400188628 -9.534240885211322 1.349469387376095 0.9918104617189297 0.9446416320880985 0.0 0.07217624434375494 0.6411774466929835 2.3915211801435827 0.014543402221193038 0.011209072590132175 2.922530921015589e-10 9.534240885211322 -0.047168829630831244 TPLS(ph)PSPMK ddPTM_A549_PD325901_60min_R1 1 TPLSPSPMK 9 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.02)PLS(0.49)PS(0.49)PMK 51.43600000000001 0.013451 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TPLSFTNPLHS(ph)DDS(ph)DSDERNSDGAVTQNK ddPTM_A549_PD325901_60min_R1 1 TPLSFTNPLHSDDSDSDERNSDGAVTQNK 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 TPLSFT(0.003)NPLHS(0.976)DDS(0.499)DS(0.499)DERNS(0.02)DGAVT(0.002)QNK 64.668 0.0020025999999999998 2287900.0 902.69 1680.4 1341.8 1628.2 1293.3 1400.4 1261.1 1571.5 1288.9 1511.1 1570.9 True False 994.3304242747442 1822.013205364312 1432.862616898874 1728.7702160895058 1202.4630696427869 1388.9956067011396 1309.0918506003989 1540.1551996821 1234.7320152704865 1415.6888881140608 1377.6892587555642 0.7217378069514025 1.3225139078242474 1.0400477522726326 1.2548331963124 0.872811529886605 1.008206747547548 0.9502083595998071 1.117926404589441 0.8962340436520441 1.0275821482362582 1.0 10.428034805936015 -6.780012128099341 24.997888643730654 0.9626156515177842 1.0985686325049437 0.08198902932242524 0.15504832391948972 317.9573586935335 427952.3838029999 0.019977390030565402 0.03780225147192531 1.659540562492649e-07 6.780012128099341 0.13595298098715958 TPLSFTNPLHSDDS(ph)DSDERNSDGAVTQNK ddPTM_A549_PD325901_60min_R1 1 TPLSFTNPLHSDDSDSDERNSDGAVTQNK 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TPLSFTNPLHS(0.015)DDS(0.857)DS(0.111)DERNS(0.015)DGAVTQNK 79.843 2.7119e-06 10023000.0 1175.0 1307.1 1368.9 1281.1 1609.1 1428.7 1358.9 1452.4 1324.8 1360.0 1542.6 True False 1294.2851350107185 1417.2539042678493 1461.8017858644123 1360.2306374108007 1496.0823670936431 1417.0651408839751 1410.6136831186122 1423.4307426142425 1269.1232631160992 1274.1293679009486 1352.8699793470846 0.9566958796996589 1.0475906228267682 1.0805190507441815 1.0054407727099306 1.1058582050994101 1.0474510947222526 1.0426823749902379 1.052156352306089 0.938096995639298 0.9417973547730453 1.0 10.401807477143725 -8.7490319182849 24.959297031044336 0.9707680256354694 1.0448241816686124 0.456219785146633 0.039486519595594065 155.08571489050266 311975.811725521 0.006778983210624799 0.007659630522964353 1.7822477771059388e-09 8.7490319182849 0.07405615603314297 TPLSPS(ph)PMK ddPTM_A549_PD325901_60min_R1 1 TPLSPSPMK 9 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.019)PLS(0.102)PS(0.879)PMK 53.123999999999995 0.0087221 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TPLSQS(ph)MSVLPTSKPEK ddPTM_A549_MK2206_60min_R1 6 TPLSQSMSVLPTSKPEK 17 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 TPLS(0.013)QS(0.987)MS(0.001)VLPTSKPEK;T(0.002)PLS(0.031)QS(0.956)MS(0.01)VLPTSKPEK;T(0.003)PLS(0.141)QS(0.853)MS(0.003)VLPTSKPEK;T(0.003)PLS(0.104)QS(0.889)MS(0.004)VLPTSKPEK;TPLSQS(0.996)MS(0.004)VLPTSKPEK;TPLS(0.002)QS(0.994)MS(0.004)VLPTSKPEK 176.84 8.9557e-31 238463200.0 18978.5 19377.8 21721.4 21427.699999999997 26062.3 21325.4 19716.5 18965.2 31502.799999999996 27723.800000000003 30544.000000000004 True False 22181.606820223526 20364.047250724205 24801.82114224392 26677.487461925997 22228.570194520045 23582.039673345134 23298.732835490202 21653.575178489114 24367.46609963426 21460.97432498469 22959.08182848487 0.9661364938689863 0.8869713258941803 1.0802618905897536 1.161957941577079 0.9681820188010092 1.0271333953820128 1.0147937539289544 0.9431376803415528 1.0613432314789715 0.9347488059543607 1.0 14.486777326964683 -5.757875852120292 24.999924806474233 1.0300963837413541 0.9265539016191757 0.23452093204813507 0.06441986100335431 77.62084963437245 544522.5618389463 0.007913120792221031 0.028424371083908377 1.7463212868247944e-06 5.757875852120292 -0.10354248212217843 TPLSQS(ph)MSVLPTSKPEK ddPTM_A549_PD325901_60min_R1 5 TPLSQSMSVLPTSKPEK 17 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 TPLS(0.005)QS(0.994)MS(0.001)VLPTSKPEK;T(0.086)PLS(0.08)QS(0.387)MS(0.387)VLPT(0.054)S(0.007)KPEK;TPLS(0.025)QS(0.97)MS(0.005)VLPTSKPEK;TPLS(0.001)QS(0.9)MS(0.099)VLPTSKPEK;TPLS(0.001)QS(0.998)MS(0.001)VLPTSKPEK 153.77 1.8317e-18 370229000.0 19272.5 21765.9 22947.1 21602.100000000002 26326.6 24498.8 25359.7 26522.7 22905.0 24685.7 26866.3 True False 21229.030012335366 23600.188780432694 24504.428198122034 22936.412655071326 24477.51043783947 24299.28989535125 26324.7772608603 25993.683941844352 21942.382504283094 23127.040689112087 23561.91541950769 0.9009891443188506 1.0016243739205224 1.0400015347578238 0.9734528049481711 1.038859108100088 1.0312951838895517 1.117259645158778 1.1032075906835366 0.9312648022713921 0.9815433201141383 1.0 14.524169204537039 -4.328602602315179 16.228036917500592 0.9954196299945416 1.0051216343150584 0.0 0.06423844373089287 0.0 0.0 0.009287393812745692 0.0 4.692425624021166e-05 4.328602602315179 0.009702004320516822 TPLSQSMS(ph)VLPTSKPEK ddPTM_A549_PD325901_60min_R1 1 TPLSQSMSVLPTSKPEK 17 1 Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3 Q6WKZ4 RAB11FIP1 Rab11 family-interacting protein 1 1 TPLS(0.009)QS(0.406)MS(0.585)VLPTSKPEK 109.05 1.682e-09 12330000.0 4269.0 4506.1 4833.2 5156.4 5902.9 5147.3 6601.3 6334.4 6356.2 5666.3 5884.1 True False 4702.385737328301 4885.844861159328 5161.210016392634 5474.89911696593 5488.300667899485 5105.382095381878 6852.516083869968 6208.05542275933 6089.071018280913 5308.528850983192 5160.3930023831035 0.9112456619402259 0.9467970479967344 1.0001583239898886 1.0609461555423367 1.0635431575395424 0.9893397834281572 1.3279058553690446 1.203019890130928 1.1799626531291203 1.0287063114246682 1.0 12.333265226473143 -6.087407366985475 0.9671679146931381 1.1087043538511707 0.900330806469136 0.38698737561670515 0.0927862187758549 0.7770070348494652 1.0873928459686641 0.016705427070158086 0.12432295831080742 8.176974304435986e-07 6.087407366985475 -0.20837354738203473 TPLYLQPDAYGS(ph)LDR ddPTM_A549_MK2206_60min_R1 2 TPLYLQPDAYGSLDR 15 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR 87.287 3.9887e-05 6944600.0 2429.5 2899.6 3220.8 2546.4 4180.3 3117.2 2676.9 3006.5 4029.1000000000004 3712.6 4767.2 True False 2839.540204427804 3047.1772548070394 3677.557870806636 3170.2681143122386 3565.3834076099242 3447.0600349701062 3163.2580796451552 3432.6805820200975 3116.5152831505893 2873.921081487317 3583.3726719733213 0.7924211251139844 0.8503657123469088 1.0262839529837258 0.8847162727750584 0.994979795290594 0.9619596817073036 0.8827600055070984 0.9579468551703165 0.8697156473636779 0.802015683148212 1.0 11.80710237678702 TPMAGVS(ph)PK ddPTM_A549_MK2206_60min_R1 1 TPMAGVSPK 9 0 A0A087WWD1;B7Z6K7;Q9H707 A0A087WWD1 ZNF814;ZNF552 Putative uncharacterized zinc finger protein 814;Zinc finger protein 552 1 T(0.141)PMAGVS(0.859)PK 41.70399999999999 0.030399000000000002 5559700.0 1694.4 1766.3 1362.6 1602.6 2770.2 1862.5 1990.0 1768.8 2537.6 2618.3 3062.5 True False 1980.373295897293 1856.1971255227195 1555.8371692626426 1995.237071943447 2362.7072496617498 2059.588513772558 2351.557241022772 2019.5328167228147 1962.8376517145102 2026.8242115116764 2301.996729299858 0.8602850172161689 0.8063422080044717 0.6758641962692291 0.8667419230218844 1.026372982893141 0.8946965421618878 1.0215293580099862 0.8772961277564658 0.8526674372432747 0.8804635496281203 1.0 11.16867006833804 -6.51900337279048 24.94002849528436 0.9350802971659415 0.781368540183983 0.49216779897731566 0.0692490563872325 104.97967241225375 675596.9083281851 0.010694302831160777 0.02266866808499782 3.0268899207679716e-07 6.51900337279048 -0.1537117569819585 TPMAGVS(ph)PK ddPTM_A549_PD325901_60min_R1 1 TPMAGVSPK 9 0 A0A087WWD1;B7Z6K7;Q9H707 A0A087WWD1 ZNF814;ZNF552 Putative uncharacterized zinc finger protein 814;Zinc finger protein 552 1 T(0.004)PMAGVS(0.996)PK 41.398999999999994 0.031519 4923600.0 2148.2 2589.0 2080.6 1969.6 2583.4 3016.7 2595.9 2458.5 2523.6 2740.7 2983.3 True False 2366.2836825787426 2807.184116096291 2221.802027664181 2091.2577187138486 2401.9508962461723 2992.1329953836985 2694.688395030986 2409.4632888440597 2417.541868055397 2567.6517342692123 2616.3730126968467 0.9044137327114827 1.0729296252764677 0.8491916163643812 0.7992964720876204 0.9180460448834636 1.1436186586787693 1.0299328046704683 0.9209173451764383 0.9240050468046592 0.981378313340186 1.0 11.353352523206382 -7.0300610460367166 24.98113671508558 0.9785602391298824 0.9073098235260174 0.2020450685414934 0.0848168699145234 1115.49031548106 926986.3322107167 0.01324653154518247 0.02296412070446059 9.331231283441666e-08 7.0300610460367166 -0.07125041560386502 TPMYGSQT(ph)PLQDGSR ddPTM_A549_MK2206_60min_R1 2 TPMYGSQTPLQDGSR 15 0 O00267;O00267-2 O00267 SUPT5H Transcription elongation factor SPT5 1 T(0.008)PMY(0.006)GS(0.057)QT(0.928)PLQDGS(0.001)R;T(0.014)PMY(0.032)GS(0.206)QT(0.73)PLQDGS(0.019)R 52.42 0.0092831 8552300.0 1921.38 2314.3 2278.4 2327.7 2914.5 2333.0 2061.35 2535.2 3789.8 3670.0 4390.5 True False 2245.6619707690847 2432.0879848254713 2601.5113800440377 2897.9866044944233 2485.7809108148044 2579.876511479935 2435.870612453413 2894.572363724379 2931.4163510670132 2840.944451074303 3300.2176783644204 0.6804587423100009 0.7369477476500301 0.7882847840913755 0.878119835395421 0.7532172580951543 0.7817291957415715 0.7380939228410607 0.8770852852224348 0.8882493934520755 0.8608354744897517 1.0 11.688345470690653 -9.254213714610051 0.2590331320764279 1.054716283932493 0.7147906449395037 0.46810142281324807 0.0642030919172848 0.7319847596063336 0.14700657031914569 0.09146680493942129 0.05464967926575986 5.569116274642712e-10 9.254213714610051 -0.33992563899298933 TPNLVKHS(ph)PSEDK ddPTM_A549_PD325901_60min_R1 1 TPNLVKHSPSEDK 13 1 B4DWJ3;Q96CJ1-2;Q96CJ1 B4DWJ3 EAF2 ELL-associated factor 2 1 T(0.049)PNLVKHS(0.944)PS(0.007)EDK 41.412 0.040359 1695100.0 1220.4 1195.8 1452.3 1427.0 1453.9 1263.6 1304.7 1464.4 1455.6 1459.9 1761.8 True False 1344.2941095890046 1296.574262660465 1550.861811389353 1515.142549047859 1351.783079682709 1253.3096605452452 1354.351072459234 1435.1913932004247 1394.4261939853518 1367.721664851907 1545.1097689703697 0.8700314609264398 0.8391470228839962 1.0037227403091344 0.980605119115595 0.8748783463996285 0.8111460335794949 0.876540359564063 0.9288604745259021 0.9024771067977712 0.8851938498604727 1.0 10.593493619570882 -10.51930459844519 0.6746558713947456 1.005722687605253 0.8979978768460893 0.0 0.06325617276461147 0.8519358002175306 0.6439349497636965 0.051002627861799404 0.011873980585073475 3.024791204790652e-11 10.51930459844519 -0.10772481075916363 TPPAPKT(ph)PPSSGEPPK ddPTM_A549_MK2206_60min_R1 2 TPPAPKTPPSSGEPPK 16 1 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 T(0.005)PPAPKT(0.989)PPS(0.004)S(0.001)GEPPK;T(0.019)PPAPKT(0.948)PPS(0.027)S(0.006)GEPPK 98.132 1.3028e-06 19266100.0 4426.3 5418.5 5398.0 4591.5 6422.8 4867.2 4865.6 4909.9 6326.0 7372.1 7524.0 True False 5173.351227354924 5694.278505715256 6163.517569117677 5716.417706120269 5478.0146282317155 5382.24387341412 5749.616538653469 5605.893360938122 4893.171100546185 5706.73748985419 5655.583148163967 0.9147334751915733 1.006841974830456 1.089811149026888 1.0107565491236834 0.9686029689104831 0.9516691263148374 1.016626648044248 0.9912140294070336 0.8651930264936 1.0090449278792462 1.0 12.46546007308394 -8.562459728895215 24.99545085712312 0.935912830684844 0.9968803487733747 0.03645442741463556 0.055075457498057576 205.5051887209673 129775.9585279069 0.010597102972023263 0.012015992225775431 2.7386735732429926e-09 8.562459728895215 0.06096751808853074 TPPAPKT(ph)PPSSGEPPK ddPTM_A549_PD325901_60min_R1 2 TPPAPKTPPSSGEPPK 16 1 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 T(0.001)PPAPKT(0.994)PPS(0.004)S(0.001)GEPPK;T(0.001)PPAPKT(0.989)PPS(0.009)S(0.002)GEPPK 105.32 3.5477e-07 24311000.0 8177.1 7937.299999999999 7365.599999999999 7588.900000000001 9465.7 9072.8 7356.8 8938.5 8975.5 9129.5 10059.7 True False 9007.233172337143 8606.204126956773 7865.473908950919 8057.649117357607 8800.861886892233 8998.914124877258 7636.767049795431 8760.214605382402 8598.290948142021 8553.061811949778 8822.420673692379 1.020948048781652 0.975492378482887 0.8915324036185461 0.913314997706327 0.9975563637693641 1.020005104915385 0.8656090354620638 0.9929490929291697 0.9745954388438208 0.9694688258806561 1.0 13.106958837812723 -9.402793094588942 0.7743592514180859 0.9958564785724993 0.9565517588091775 0.030573073312505472 0.04912896729697953 1.0141572111267678 1.3142648040872833 0.016058522018997597 0.011106703585081338 3.955550244477562e-10 9.402793094588942 -0.03930471976332173 TPPAS(ph)LYHGYLPENGVLRPEPTK ddPTM_A549_MK2206_60min_R1 2 TPPASLYHGYLPENGVLRPEPTK 23 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 T(0.137)PPAS(0.863)LYHGYLPENGVLRPEPTK;T(0.111)PPAS(0.889)LYHGYLPENGVLRPEPTK 81.34100000000001 2.2118e-05 6275800.0 1380.95 1518.24 1695.52 1824.63 2101.2 1716.96 1671.8600000000001 1665.99 2613.0 2649.5 2602.9 True False 1614.0205990140264 1595.511931072645 1935.970231343166 2271.6644319107522 1792.1162634428094 1898.6475675741933 1975.6153210936343 1902.1491843803951 2021.1596721035687 2050.9761098423346 1956.5280936145657 0.8249411824351688 0.8154812273229537 0.9894926822985607 1.1610691608899883 0.9159675597256488 0.9704167161058027 1.0097556623599542 0.9722064255496026 1.0330338106056018 1.0482732737321865 1.0 10.934080110580542 -5.7868849560941 5.618328938022023 1.0117936637459088 0.8186105068585151 0.6188563579718382 0.057931306277058864 0.0700765626833196 6.333378604946603 0.007412346858019926 0.025330097031563317 1.6334845980159335e-06 5.7868849560941 -0.19318315688739374 TPPAS(ph)LYHGYLPENGVLRPEPTK ddPTM_A549_PD325901_60min_R1 2 TPPASLYHGYLPENGVLRPEPTK 23 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 T(0.165)PPAS(0.835)LYHGYLPENGVLRPEPTK;T(0.17)PPAS(0.83)LYHGYLPENGVLRPEPTK 80.847 2.4068e-05 11351800.0 2224.8 2374.5 2706.5 2477.6000000000004 2467.07 2774.8 2796.3 2602.0 2989.0 3078.0 2498.7 True False 2450.6600581888047 2574.6074483084735 2890.1793655066353 2630.635724962142 2293.7915141294598 2752.2029487820078 2902.7147266940733 2550.1010687704893 2863.3827245274915 2883.6545547052324 2191.375740564344 1.1183203376878157 1.1748817880248303 1.3188880902561824 1.2004494146150744 1.0467358343296893 1.2559247133370355 1.3246084060173717 1.163698685517876 1.3066598628084136 1.3159105950322358 1.0 11.097621159484447 -10.939130168830356 1.1770353359021937 0.9990474996900262 1.2205778215106753 0.0 0.12391220134760743 0.34006802247739537 0.8313060757315976 0.061376209498071176 0.014126966975534328 1.150455517204299e-11 10.939130168830356 0.22153032182064913 TPPGALLGAPPPLVPAPRPS(ph)SPPR ddPTM_A549_MK2206_60min_R1 1 TPPGALLGAPPPLVPAPRPSSPPR 24 1 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 TPPGALLGAPPPLVPAPRPS(0.555)S(0.445)PPR 66.98 6.747e-05 3687300.0 2915.6 3779.0 3414.8 2014.1 4273.4 3141.9 2911.7 3386.0 4229.6 4416.9 5259.0 True False 3407.682000423832 3971.3349585859432 3899.0699879627728 2507.554590416384 3644.7885209387496 3474.3737725755723 3440.718200344727 3865.9758691901034 3271.602353283299 3419.119222329723 3953.0451589838253 0.8620397347800133 1.004626762120476 0.9863459260265756 0.6343349214510312 0.9220204612779287 0.878910721442074 0.8703968869480869 0.9779741221534377 0.827615729571959 0.8649330034996732 1.0 11.94874872104144 -10.98967521329702 1.214220148460096 1.0011753719646188 0.8812143881419533 0.0 0.10377291040173486 0.6960796056859486 1.7960026772789042 0.0705844711367691 0.015503213696835943 1.0240585471669625e-11 10.98967521329702 -0.11996098382266551 TPPGALLGAPPPLVPAPRPS(ph)SPPR ddPTM_A549_PD325901_60min_R1 1 TPPGALLGAPPPLVPAPRPSSPPR 24 1 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 TPPGALLGAPPPLVPAPRPS(0.56)S(0.44)PPR 59.567 0.00020975 4060600.0 4273.4 3691.0 4863.2 5089.2 4846.7 4556.4 5850.4 5662.8 4645.7 5065.1 6391.0 True False 4707.232422089193 4002.0535235656284 5193.245996797291 5403.548325588206 4506.284512207295 4519.294189069607 6073.04017346172 5549.8510116193365 4450.457384856931 4745.2887215846295 5604.947515886951 0.8398352364133245 0.7140215875745496 0.926546766419719 0.9640676046068427 0.8039833556754012 0.8063044615957397 1.0835141910335437 0.9901700231605298 0.794023025593429 0.8466250055213433 1.0 12.4524851485181 TPPGALLGAPPPLVPAPRPS(ph)SPPRGPGPAR ddPTM_A549_MK2206_60min_R1 1 TPPGALLGAPPPLVPAPRPSSPPRGPGPAR 30 2 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPRGPGPAR 47.191 0.0023201 6071100.0 1408.0 1389.2 1739.9 1174.2 2233.3 1434.2 1402.1 1657.1 2245.0 2353.3 1991.4 True False 1645.6359777050195 1459.9043462470477 1986.643982680225 1461.8790527118415 1904.784528434622 1585.9660920550905 1656.843420923632 1891.9989996559125 1736.511084528325 1821.6878955621694 1496.8804201559963 1.0993770481235374 0.9752979106339735 1.3271895042044763 0.976617125207298 1.2725028016841293 1.0595142208419095 1.1068642482149411 1.263961352008826 1.1600867117677682 1.2169895945143858 1.0 10.547743259472838 -10.702239235401274 1.0236064607160793 1.0020508934181516 1.1384129999673314 0.0 0.12625396182548085 0.6654639466035734 1.2681052896159932 0.06313433651145871 0.017553959773011555 1.985001158653536e-11 10.702239235401274 0.1363621065491798 TPPGALLGAPPPLVPAPRPS(ph)SPPRGPGPAR ddPTM_A549_PD325901_60min_R1 2 TPPGALLGAPPPLVPAPRPSSPPRGPGPAR 30 2 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPRGPGPAR;TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPRGPGPAR 58.49 0.00048086 19477500.0 2996.5 3552.2 3895.7 4593.0 4437.0 4855.0 4280.6 4633.9 4183.0 4664.5 4901.0 True False 3300.7024740932884 3851.5563604469835 4160.085628747163 4876.699178540168 4125.360426819026 4815.462489670122 4443.5005754342 4541.473229275774 4007.203056774337 4369.982673951452 4298.208069998741 0.7679252424125329 0.8960842047946999 0.9678651105292774 1.1345889028917104 0.9597861154311764 1.1203418753228325 1.033803041423144 1.0565968783537985 0.9322962014669315 1.0166987271867303 1.0 12.069519607886031 -5.46411880039929 2.169222783110579 0.9986737145888186 0.7538582034582372 0.5855488805395024 0.06376929304901557 0.27635219387109705 1.9557459824730865 0.009796456289037584 0.11002278929399292 3.4346398115336445e-06 5.46411880039929 -0.24481551113058142 TPPKS(ph)PGDPSKDR ddPTM_A549_MK2206_60min_R1 1 TPPKSPGDPSKDR 13 2 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 T(0.097)PPKS(0.897)PGDPS(0.005)KDR 44.601000000000006 0.019167 8665400.0 568.16 611.11 770.7 696.86 894.6 593.23 616.47 545.47 914.24 832.74 949.34 True False 664.0515178216511 642.2128887381471 879.9968489290472 867.5907312832342 763.0055250694537 656.0052048457965 728.474619283069 622.7920429318152 707.166099741281 644.623455636952 713.592677548907 0.9305750166924037 0.8999712426198939 1.2331920948960908 1.2158066619507495 1.069245171755788 0.9192992381859697 1.0208549529758062 0.8727556525257806 0.9909940530363899 0.9033493138566742 1.0 9.478957001055813 -7.143242245648585 8.019019360818088 0.9827751118219342 1.078259179622899 0.20969808814435487 0.10479216897497175 0.42745111715513956 26.828416580177745 0.01553850639778288 0.026978936558576836 7.190477875817024e-08 7.143242245648585 0.09548406780096486 TPPKS(ph)PGDPSKDR ddPTM_A549_PD325901_60min_R1 2 TPPKSPGDPSKDR 13 2 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 T(0.026)PPKS(0.948)PGDPS(0.026)KDR;T(0.13)PPKS(0.853)PGDPS(0.017)KDR 54.501000000000005 0.0064803 24827000.0 3045.6000000000004 2530.8 2596.7 2737.5 3322.1 2955.2 2804.7 2984.8 3135.1 3855.6 4220.8 True False 3354.787069947781 2744.0793978433717 2772.927677225598 2906.5891576864174 3088.7671566228255 2931.1338309934363 2911.43439329073 2925.2658224696993 3003.342649603929 3612.156757999186 3701.6683578556795 0.906290554859744 0.7413088187708354 0.7491021369704532 0.7852105798505841 0.8344256853988135 0.7918412855038688 0.7865195127791729 0.7902560520479099 0.811348386526912 0.9758185792991066 1.0 11.853959930840457 -10.510817166390764 0.598748035015059 1.0195521389927704 0.7919652449159996 0.7417337797220445 0.04266571575371288 0.35440982812023686 0.20226626880557577 0.042235184416535974 0.008950580662664978 3.084486214628125e-11 10.510817166390764 -0.2275868940767708 TPPKS(ph)PSSAK ddPTM_A549_PD325901_60min_R1 1 TPPKSPSSAK 10 1 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 T(0.001)PPKS(0.451)PS(0.451)S(0.096)AK 60.157 0.0022716 17297000.0 3961.3 3917.2 3903.8 3670.8 4654.7 4123.7 3961.0 4308.4 4608.5 4918.0 6301.8 True False 4363.448259845069 4247.316191414593 4168.735343456419 3897.5369790083296 4327.769929843254 4090.11795440838 4111.738022542366 4222.465582125585 4414.820771490449 4607.4766406888675 5526.7185504015615 0.7895188112171966 0.7685059683572978 0.7542876130635467 0.7052171995849402 0.7830632029432377 0.7400626460544475 0.7439745637569357 0.7640095191420211 0.7988141120683043 0.8336731097613241 1.0 12.432207429459728 -10.28793982118581 0.5518991821509279 1.0184089397138893 0.7502824096286653 0.4921024356320147 0.05278273021536044 0.17436569837972382 0.09158865627471788 0.022630628770235937 0.005790578788567832 5.1530004313377567e-11 10.28793982118581 -0.268126530085224 TPPLQQS(ph)PSVIR ddPTM_A549_PD325901_60min_R1 1 TPPLQQSPSVIR 12 0 Q6IQ26-2;Q6IQ26;H0YDE6 Q6IQ26-2 DENND5A DENN domain-containing protein 5A 1 T(0.017)PPLQQS(0.868)PS(0.115)VIR 45.188 0.051954999999999994 2738000.0 3223.8 3445.7 2715.0 3858.8 4452.7 4008.4 3434.9 4088.1 3828.2 3954.4 3855.6 True False 3551.077802763872 3736.0812316852025 2899.256226621287 4097.149312029351 4139.957712981083 3975.7569193807853 3565.616999149402 4006.5596384475894 3667.3140669241043 3704.7185091378765 3381.3856426621387 1.050184207906004 1.1048965206890198 0.8574166134859215 1.211677621249878 1.2243376386142477 1.1757774295896941 1.0544839825907049 1.1848869256135055 1.0845595428851635 1.0956214110559659 1.0 11.72339884778148 -10.052436679845885 0.9136840795058773 1.0082507356400956 1.1067685987230338 0.0199373344879753 0.10090332464150725 0.7859355168081461 1.3200973850536686 0.04027355719840973 0.019336052816090278 8.862644316322059e-11 10.052436679845885 0.0985178630829382 TPPPRS(ph)PNPS(ph)PERPR ddPTM_A549_MK2206_60min_R1 1 TPPPRSPNPSPERPR 15 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 2 T(0.396)PPPRS(0.604)PNPS(1)PERPR 55.453 0.011613 6566500.0 492.2 639.4 553.42 382.82 655.64 433.6 432.56 513.75 917.68 915.14 799.43 True False 575.2713268653486 671.9427289017867 631.9032777141729 476.6109171854426 559.1962245210563 479.48326419961427 511.1505528526686 586.575635793389 709.8269452338324 708.4092384076673 600.9094678544282 0.9573344366155161 1.1182095887105685 1.0515781686223207 0.7931492890055492 0.9305831484361351 0.7979292886025392 0.8506282230462312 0.9761464366467403 1.181254387234567 1.1788951186558458 1.0 9.231003842748223 -8.56521739668471 8.788333650201597 1.085390910598772 0.9291554844807655 0.3826566543405989 0.10385252366868578 0.28500200399267894 54.772623050265885 0.019714146983178173 0.022379094487372006 2.721338734661342e-09 8.56521739668471 -0.15623542611800656 TPPPRS(ph)PNPS(ph)PERPR ddPTM_A549_PD325901_60min_R1 1 TPPPRSPNPSPERPR 15 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 2 T(0.047)PPPRS(0.953)PNPS(1)PERPR 48.61600000000001 0.022091 13169000.0 656.61 767.41 848.68 890.08 849.37 869.42 862.01 864.62 1153.4 877.82 779.85 True False 723.2685638292655 832.0823339256293 906.2765283274235 945.0582200816535 789.713181367428 862.3397317752823 894.8142622599718 847.3744758187315 1104.926609056544 822.3942953903015 683.9333938764579 1.0575131588908977 1.2166131108315676 1.325094718932716 1.3817986203673567 1.1546638728830334 1.2608533806013438 1.3083353880240658 1.238972220695217 1.6155470970556705 1.202447932435442 1.0 9.417712022191395 -7.538817977223148 10.247699371914273 1.2941491421168643 1.237318797600505 0.009678997449204974 0.15656688895418333 1.6260317558733846 997.1610330479317 0.03497754225808939 0.05221769666756006 2.8918916865245984e-08 7.538817977223148 -0.05683034451635938 TPPQQKS(ph)PTTAR ddPTM_A549_MK2206_60min_R1 1 TPPQQKSPTTAR 12 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 T(0.029)PPQQKS(0.418)PT(0.418)T(0.135)AR 49.223 0.008825 32731000.0 3800.9 4096.8 3882.0 3291.6 3834.1 3486.4 3161.7 3427.1 4873.0 5595.7 6228.0 True False 4442.398996916914 4305.309621152395 4432.5259731965225 4098.042147765538 3270.1089690015597 3855.3285339149784 3736.1399642923075 3912.9019200535763 3769.273280581973 4331.627483617568 4681.415715944337 0.9489434962561945 0.9196597530292023 0.9468345137775042 0.875385224561045 0.698529925010497 0.8235390249116725 0.7980790835489072 0.835837310223637 0.805156710980459 0.9252815273090506 1.0 12.192729168639783 -2.054813398780478 0.8198403873601258 0.874302416528836 24.67819071837571 0.10425867086825302 0.07902339818849932 1171.3703389928903 3.88747860289658 0.015655318280047632 51846.50968287582 0.008814275103740894 2.054813398780478 23.803888301846875 TPPQQKS(ph)PTTAR ddPTM_A549_PD325901_60min_R1 1 TPPQQKSPTTAR 12 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 T(0.005)PPQQKS(0.826)PT(0.158)T(0.01)AR 54.812 0.0055221 65180000.0 1953.5 1795.9 2177.9 2448.5 2458.1 2606.0 2450.2 2047.9 2595.3 2431.0 2672.0 True False 2151.817881909308 1947.2467957115973 2325.705390776612 2599.738284053037 2285.451535984639 2584.7776000165463 2543.443701800886 2007.053027953528 2486.2285663988614 2277.5062451229433 2343.3609392035573 0.9182613936718818 0.8309632387972686 0.9924657153187226 1.1094058284237747 0.9752878857669276 1.1030215434482065 1.0853828188607306 0.85648480111462 1.06096697474349 0.971897332169838 1.0 11.194363468950327 -5.883914721716989 5.462641657067341 1.027616446872432 0.8762828888899891 0.37009478657930117 0.07181500552857631 0.13513698284020162 5.880071392197192 0.009129480683387866 0.029550057357187954 1.3064273936876781e-06 5.883914721716989 -0.15133355798244297 TPPRAS(ph)PTR ddPTM_A549_PD325901_60min_R1 1 TPPRASPTR 9 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 T(0.081)PPRAS(0.685)PT(0.234)R 49.28 0.0085214 26322000.0 1868.3 2077.5 2047.9 2189.6 2775.3 2170.2 2376.6 2309.8 1966.6 3098.2 2500.1 True False 2057.9684406302345 2252.5782159868836 2186.882809023106 2324.8466190575973 2580.372502265232 2152.526610727518 2467.0428135254206 2263.7292269969553 1883.9506410357192 2902.579123257879 2192.603549439675 0.9385957808725399 1.0273531740667552 0.9973908915644913 1.0603132607587529 1.1768531994416647 0.9817217578059659 1.1251659307747992 1.0324389138088628 0.8592299513138921 1.3238048091273225 1.0 11.098429262673234 -8.632204674104143 8.04539037578508 0.9336517360286098 1.0471857160094158 0.0 0.13624782578600156 0.21528697551873624 14.677944863229563 0.01301209878823258 0.014751767413123418 2.3323586103311392e-09 8.632204674104143 0.11353397998080594 TPPRASPT(ph)R ddPTM_A549_PD325901_60min_R1 1 TPPRASPTR 9 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 T(0.001)PPRAS(0.37)PT(0.629)R 64.64 0.0024481999999999998 22832000.0 1954.8 2569.7 1756.1 1981.9 2630.8 2667.1 1997.4 2271.8 2314.1 2144.6 3135.6 True False 2153.2498569522995 2786.257637362934 1875.2795062871626 2104.317461778525 2446.021683767298 2645.3800218741853 2073.4121500192196 2226.487166807376 2216.8464244995207 2009.1895900002735 2749.9410782060922 0.7830167249826891 1.0132063044712698 0.6819344316680741 0.7652227454819737 0.8894814885862738 0.9619769830122626 0.7539842094986987 0.8096490446478264 0.8061432450566058 0.7306300509212933 1.0 11.42518499163009 -10.731990279753576 0.9060385498119226 1.0036981859896665 0.8305721117030271 0.0 0.12002141293610127 0.5761466112880318 0.8119176397234389 0.06725383098513507 0.01595263348462947 1.8535731090576386e-11 10.731990279753576 -0.1731260742866394 TPPT(ph)PPSSIVAK ddPTM_A549_MK2206_60min_R1 2 TPPTPPSSIVAK 12 0 Q96QT6;Q96QT6-4 Q96QT6 PHF12 PHD finger protein 12 1 T(0.345)PPT(0.655)PPSSIVAK;T(0.002)PPT(0.997)PPS(0.001)SIVAK 116.01 2.6551e-05 20885000.0 4711.200000000001 5765.8 6074.4 5151.299999999999 6165.0 5006.200000000001 5412.8 4687.3 7561.2 7597.2 8363.0 True False 5506.335382218676 6059.254592277013 6935.841260068249 6413.368731250642 5258.136666726115 5535.952761153388 6396.235695581935 5351.739129254213 5848.600272755264 5880.98724351545 6286.236292941948 0.8759351582760375 0.9638922735182919 1.1033376629280804 1.02022393565629 0.8364522779122763 0.8806466227445248 1.01749845177845 0.8513423421997407 0.9303818692469368 0.9355339140080524 1.0 12.617980787191442 -5.259960207636415 23.033136385984342 0.9605711834402527 0.8759350787446203 0.0736533438984388 0.07628280607199744 85.64760257529345 1333228.020882301 0.010537200588527829 0.09120360920827891 5.495912280136377e-06 5.259960207636415 -0.08463610469563243 TPPT(ph)PPSSIVAK ddPTM_A549_PD325901_60min_R1 4 TPPTPPSSIVAK 12 0 Q96QT6;Q96QT6-4 Q96QT6 PHF12 PHD finger protein 12 1 T(0.002)PPT(0.995)PPS(0.001)S(0.002)IVAK;T(0.257)PPT(0.633)PPS(0.043)S(0.066)IVAK;T(0.07)PPT(0.926)PPS(0.003)S(0.001)IVAK;T(0.015)PPT(0.68)PPS(0.118)S(0.187)IVAK 101.6 0.0002378 31947800.0 12757.900000000001 13798.7 12889.5 14121.5 17088.0 14793.599999999999 15041.3 15552.6 15416.400000000001 15111.699999999999 16152.400000000001 True False 14053.072616130423 14961.564875541859 13764.258980860064 14993.752982746562 15887.797830399717 14673.125826402442 15613.70490241517 15242.39119222133 14768.502319975127 14157.544683021135 14165.757198499825 0.9920452835107653 1.056178266074355 0.9716571297944963 1.0584505136325804 1.121563613421403 1.0358165554296206 1.1022146351674504 1.076002572868856 1.042549446035905 0.9994202558067592 1.0 13.790120099325756 -3.902958165451744 11.623817572506074 1.0357273055544152 0.5832739980313151 0.0 0.04572588101211855 0.0 0.0 0.006136780709883329 0.0 0.00012503794704792328 3.902958165451744 -0.4524533075231001 TPQASTYSYETSDLCYT(ph)AEKKSPSEAR ddPTM_A549_MK2206_60min_R1 1 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYSYETSDLCYT(0.525)AEKKS(0.407)PS(0.067)EAR 117.49 7.3687e-18 6241800.0 1028.3 1022.3 708.46 813.31 1563.4 1194.8 1038.6 1173.6 1466.5 1387.5 1498.0 True False 1201.851900478744 1074.330703403655 808.9302810331812 1012.570986510873 1333.4259310234568 1321.232942955948 1227.3001761438445 1339.961393999263 1134.3400915192817 1074.0627863393993 1126.005257303245 1.0673590488885905 0.9541080704868562 0.7184071972901348 0.8992595549118091 1.1842093297299334 1.1733807940828522 1.0899595434245115 1.1900134438168057 1.0074021272653721 0.9538701345957775 1.0 10.136997848019496 -6.703478977968088 23.33275748152081 1.048063089855354 0.8992784807609836 0.3395702795068076 0.10993924639993022 45.55489914682618 18337.962702621335 0.016627156969320368 0.034612169506728505 1.9793428290426622e-07 6.703478977968088 -0.1487846090943704 TPQASTYSYETSDLCYTAEKKS(ph)PSEAR ddPTM_A549_MK2206_60min_R1 4 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYSYETSDLCYT(0.002)AEKKS(0.867)PS(0.131)EAR;TPQASTYSYETSDLCYT(0.004)AEKKS(0.994)PS(0.002)EAR;TPQASTYSYETSDLCYT(0.014)AEKKS(0.95)PS(0.036)EAR;TPQASTYSYETSDLCYTAEKKS(0.998)PS(0.002)EAR 414.66 0.0 794137000.0 20220.1 23144.1 19952.800000000003 16241.599999999999 23297.2 21663.2 20889.6 17728.71 28574.8 29685.1 30592.0 True False 23632.758546017954 24322.035833556223 22782.40706800504 20220.79272911313 19870.212741614232 23955.585445131666 24684.969920637835 20241.8089343973 22102.65342457905 22979.21529280266 22995.16210375225 1.0277274167230883 1.0577022994583483 0.9907478349233949 0.8793498666318856 0.8641040516244892 1.0417663218483117 1.0734853622366876 0.880263806928951 0.9611871107867701 0.999306514523462 1.0 14.489042747541493 -10.943401483544742 1.3178483895469144 0.999432231879402 0.9728583099033292 0.016687799909218537 0.07051244175154027 2.0651611721000998 6.586244100669681 0.046452210078590135 0.011899884576998898 1.139196170699421e-11 10.943401483544742 -0.02657392197607278 TPQASTYSYETSDLCYTAEKKS(ph)PSEAR ddPTM_A549_PD325901_60min_R1 4 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYSYETSDLCYT(0.041)AEKKS(0.933)PS(0.026)EAR;TPQASTYSYETSDLCYT(0.01)AEKKS(0.989)PS(0.001)EAR;TPQASTYSYETSDLCYTAEKKS(0.966)PS(0.033)EAR;TPQASTYSYETSDLCYT(0.001)AEKKS(0.982)PS(0.017)EAR 334.71 3.5696999999999983e-233 198540000.0 10504.6 12785.800000000001 14424.5 14177.0 12241.5 12357.099999999999 12833.5 13383.6 8793.900000000001 14114.1 13249.699999999999 True False 11571.019258922199 13863.304237769004 15403.433311564915 15052.681091696919 11381.699270882375 12256.46787458344 13321.885865260654 13116.653598768911 8424.322964611009 13222.933317272626 11620.070896768484 0.995778714408711 1.1930481630386918 1.3255885827554268 1.29540355006638 0.9794862158756363 1.0547670477631885 1.146454783590472 1.1287929062822348 0.7249803412949739 1.137939125737167 1.0 13.504331250538387 -8.693069608654037 9.041629482686288 0.8702452060908106 1.1456503340173918 0.19274442548157467 0.1430824274012047 0.21165341684005315 25.925298021972296 0.02419479215824224 0.027419368788528894 2.0273577488847343e-09 8.693069608654037 0.27540512792658123 TPQEAIMDGTEIAVS(ph)PR ddPTM_A549_MK2206_60min_R1 3 TPQEAIMDGTEIAVSPR 17 0 Q06587 Q06587 RING1 E3 ubiquitin-protein ligase RING1 1 TPQEAIMDGT(0.082)EIAVS(0.918)PR;TPQEAIMDGT(0.017)EIAVS(0.983)PR;TPQEAIMDGT(0.004)EIAVS(0.996)PR 88.264 7.319199999999999e-06 5692600.0 3374.3 3653.87 3478.48 2812.2 4784.5 3880.7200000000003 3978.8 3766.35 5437.599999999999 5299.1 4986.299999999999 True False 3943.7993462855457 3839.8363760593875 3971.7807695117544 3501.1891262444533 4080.7063879888265 4291.375214586549 4701.696457578595 4300.241646463127 4205.992282062902 4102.0296296152155 3748.0640951209452 1.0522230266604564 1.0244852485468183 1.0596885935547455 0.9341326715309212 1.0887504280678924 1.1449577983932722 1.2544333123062232 1.1473234014490254 1.1221772561301888 1.0944395628012462 1.0 11.871929909196666 -6.922964252241191 24.999999999125972 1.0894986165788636 1.019914747242804 0.27787445224510676 0.06923637480944352 59.01421881548538 19149.094284133367 0.012539389161401623 0.023697217903296982 1.1940863883643648e-07 6.922964252241191 -0.06958386933605953 TPQEAIMDGTEIAVS(ph)PR ddPTM_A549_PD325901_60min_R1 4 TPQEAIMDGTEIAVSPR 17 0 Q06587 Q06587 RING1 E3 ubiquitin-protein ligase RING1 1 TPQEAIMDGT(0.065)EIAVS(0.935)PR;TPQEAIMDGT(0.011)EIAVS(0.989)PR;TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGT(0.002)EIAVS(0.998)PR 139.17 6.413199999999999e-13 13795600.0 5610.05 5636.650000000001 6473.79 5972.85 6873.42 6325.130000000001 6218.38 6769.959999999999 6409.86 7744.65 7334.860000000001 True False 6179.578146099468 6111.670277324893 6913.140319461742 6341.779379173443 6390.6546912117265 6273.620238370169 6455.023853728103 6634.92783686912 6140.475875088589 7255.6514772897635 6432.718719508458 0.960647964811318 0.9500913290037191 1.0746840676394436 0.9858630006533281 0.9934609252897746 0.9752673032856556 1.0034674505745138 1.0314344721381061 0.954569310867956 1.1279292308065023 1.0 12.651212890672571 -8.784122534931798 24.993304527860964 0.9785466274417435 0.9969194749303677 0.0 0.05620040385732697 577.3911114523115 636192.1411470895 0.006092608347805118 0.006488290271703397 1.6439078339354377e-09 8.784122534931798 0.018372847488624222 TPQKEESDVPQWSSQFLQKS(ph)PLPTK ddPTM_A549_MK2206_60min_R1 2 TPQKEESDVPQWSSQFLQKSPLPTK 25 2 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 TPQKEES(0.001)DVPQWS(0.164)S(0.122)QFLQKS(0.71)PLPT(0.005)K;TPQKEESDVPQWS(0.027)S(0.028)QFLQKS(0.944)PLPT(0.002)K 82.62 4.7786e-07 10062100.0 3208.0 3770.5 3399.6000000000004 3466.2 5019.9 3805.5 3577.1000000000004 3622.5 4924.4 5592.0 5834.8 True False 3749.4319719301875 3962.4023448923786 3881.7143994020857 4315.419155603633 4281.479359821322 4208.195484113541 4227.012767267616 4136.000468440977 3809.0312626509026 4328.763316187329 4385.85812771227 0.8548913035374329 0.9034497308190923 0.8850524313304331 0.9839395233367069 0.9762010614909256 0.9594919310143303 0.9637823760324162 0.9430310666702703 0.8684802726707785 0.9869820660262163 1.0 12.098643429606483 TPQKEESDVPQWSSQFLQKS(ph)PLPTK ddPTM_A549_PD325901_60min_R1 2 TPQKEESDVPQWSSQFLQKSPLPTK 25 2 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 TPQKEESDVPQWSSQFLQKS(1)PLPTK;TPQKEESDVPQWSSQFLQKS(1)PLPTK 131.78 2.5274e-24 21500700.0 6025.9 4893.0 5415.9 4925.9 6505.6 5886.0 5452.0 5605.6 5678.4 6225.0 6963.9 True False 6637.644931966875 5305.350281984996 5783.455542452388 5230.161655469409 6048.669099101612 5838.066367497081 5659.478843448877 5493.791910491869 5439.756595167917 5831.952437634851 6107.384447799271 1.0868228435101508 0.8686779631003451 0.9469611078006385 0.8563668621440789 0.9903861711671326 0.95590287747495 0.9266616326221626 0.8995326816983819 0.8906851438062122 0.9549018057535794 1.0 12.576338947507628 -11.01982097021944 1.3361364464900936 0.9996262391373777 0.9280177968529386 0.03552903612439329 0.062410530302616195 0.6192517585734714 1.985921381153789 0.03935879144069052 0.00909644627081206 9.553863450147204e-12 11.01982097021944 -0.07160844228443908 TPQKEESDVPQWSSQFLQKS(ph)PLPTKR ddPTM_A549_MK2206_60min_R1 2 TPQKEESDVPQWSSQFLQKSPLPTKR 26 3 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 TPQKEESDVPQWSS(0.002)QFLQKS(0.827)PLPT(0.171)KR;TPQKEESDVPQWS(0.005)S(0.026)QFLQKS(0.942)PLPT(0.028)KR 66.083 5.4895e-05 7418900.0 2227.34 2770.1 2591.8999999999996 2145.27 2777.5 2554.8 2474.3 1997.0500000000002 4501.9 3895.6 3894.0 True False 2603.260538765271 2911.086257946261 2959.470394108208 2670.8612463048285 2368.9334293320007 2825.1472402610107 2923.8482821420325 2280.137953209124 3482.226838057046 3015.581254388297 2927.0123310673157 0.8893917224516814 0.9945589320031162 1.0110891446190309 0.9124871863218003 0.8093349673276521 0.9651982706990645 0.9989190175621401 0.7789984104295478 1.189686425675998 1.0302591561985956 1.0 11.51521310828104 -8.771601695024263 24.999983316911116 1.0895741382036794 0.92571734161628 0.39457279644871635 0.08370673068127359 154.9747778764556 381247.23912267154 0.016472882366215257 0.017634076817152945 1.6919919987509286e-09 8.771601695024263 -0.16385679658739938 TPQKEESDVPQWSSQFLQKS(ph)PLPTKR ddPTM_A549_PD325901_60min_R1 2 TPQKEESDVPQWSSQFLQKSPLPTKR 26 3 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 TPQKEESDVPQWS(0.005)S(0.039)QFLQKS(0.92)PLPT(0.036)KR;TPQKEESDVPQWS(0.01)S(0.042)QFLQKS(0.938)PLPT(0.01)KR 79.021 8.0419e-07 13605200.0 3799.7 3474.3 3526.1000000000004 4110.8 4212.1 4428.4 4382.9 4404.6 4514.2 3888.0 4774.1 True False 4185.442746808703 3767.0914540569097 3765.4023501618117 4364.714779695823 3916.256626956147 4392.33657863134 4549.693657914906 4316.746797658143 4324.483872553364 3642.5110164697676 4186.915965513362 0.9996481375034052 0.8997294154183061 0.8993259910579868 1.0424653409924987 0.9353559181061737 1.0490625115980303 1.0866455633190775 1.031008702637972 1.0328566200451874 0.8699747132429384 1.0 12.031672247079022 -6.264487352520505 24.98937539536684 1.0201268928093585 0.9295840033031434 0.18883960047919757 0.06244574805159903 169.93459914354028 1393247.331660996 0.005965268818405048 0.014413873281600388 5.438919706561328e-07 6.264487352520505 -0.09054288950621514 TPQNVPAS(ph)PGGDR ddPTM_A549_MK2206_60min_R1 2 TPQNVPASPGGDR 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 TPQNVPAS(1)PGGDR;TPQNVPAS(1)PGGDR 152.07 4.1158e-13 37350000.0 2867.9 3598.9 3189.5 3089.0 4472.1 3833.5 2838.3 3152.5 5463.6 5326.8 5687.0 True False 3351.9314065768654 3782.0686378552405 3641.819060152063 3845.8051386704774 3814.260014155049 4239.15842552865 3353.9823704497167 3599.3765291263458 4226.1033235763725 4123.4721803767325 4274.760946784752 0.7841213691956295 0.8847438920999573 0.8519351387102114 0.8996538488457669 0.8922744597037484 0.9916714591296898 0.7846011536557158 0.842006506079271 0.9886174633355866 0.9646088358410284 1.0 12.061628028512978 -8.771405668653268 24.325644039297977 0.9946249357302646 0.8699301165671104 0.47501165615572094 0.054885701148795506 80.70488182759024 196983.12811586764 0.009169516096719666 0.009821380777821144 1.6927558811625357e-09 8.771405668653268 -0.12469481916315417 TPQNVPAS(ph)PGGDR ddPTM_A549_PD325901_60min_R1 1 TPQNVPASPGGDR 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 TPQNVPAS(1)PGGDR 61.265 0.007668 29603000.0 2333.6 2075.3 1924.0 1445.1 2712.4 2342.7 1701.9 2115.0 2039.6 2038.6 2573.0 True False 2570.5053540944773 2250.192814265985 2054.574209951881 1534.3605449397774 2521.8903812720123 2323.6218279197105 1766.666735815415 2072.8146658145965 1953.8827049000581 1909.8824480903463 2256.537311590852 1.139137093320331 0.9971883924576482 0.91049866510003 0.6799624083583434 1.1175930343886435 1.0297289639237404 0.7829104915486287 0.9185820483301774 0.865876533423051 0.8463775175708861 1.0 11.139894918210075 TPQPS(ph)SPMDQMGK ddPTM_A549_MK2206_60min_R1 1 TPQPSSPMDQMGK 13 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 T(0.01)PQPS(0.495)S(0.495)PMDQMGK 53.251999999999995 0.0079361 2600700.0 1206.7 1416.0 1097.9 870.93 1496.5 1383.0 1175.7 1175.3 1366.8 1754.9 2008.1 True False 1410.3614590175061 1488.0683517749922 1253.598728998574 1084.307889097533 1276.3668324015632 1529.3481420388996 1389.3094714926997 1341.9023742052946 1057.2219823310975 1358.4668711690176 1509.4333492594442 0.934364846059255 0.9858456834182615 0.8305094952444324 0.7183542682620033 0.8455933698747098 1.0131935555744982 0.9204178986599975 0.8890106839521311 0.7004098477417304 0.8999846676473039 1.0 10.559791339085143 -5.759863493390096 24.999461519386315 0.8607530795533169 0.9601052832531823 0.11935247969180474 0.09389661574182212 76.5628094933032 1214451.4158344408 0.016829564231660137 0.05898119543937207 1.7383471368308409e-06 5.759863493390096 0.09935220369986542 TPQPSS(ph)PMDQMGK ddPTM_A549_MK2206_60min_R1 2 TPQPSSPMDQMGK 13 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 T(0.018)PQPS(0.121)S(0.861)PMDQMGK;T(0.032)PQPS(0.317)S(0.651)PMDQMGK 52.555 0.008455599999999999 2782500.0 896.24 838.39 1027.9 571.05 1220.0 876.86 722.66 811.84 1311.3 1145.7 1585.3 True False 1047.5034010357585 881.0604699467774 1173.6716764164626 710.9572756354088 1040.5396161242275 969.6487431874401 853.9579677374451 926.9208061557279 1014.2926437158095 886.8855742767925 1191.6262579458182 0.8790536412326919 0.7393765151378849 0.9849327073739491 0.5966277353278456 0.8732097074782146 0.8137188457553516 0.7166323854003841 0.777862018376129 0.8511835291916907 0.7442648803372693 1.0 10.218716104056057 -9.948173463961744 0.7404302982839358 0.9904584977072406 0.7967643800967062 0.0 0.1201639427520702 0.44765467622285826 0.49971988573694237 0.042023254127842385 0.01886251197730252 1.1267473259038326e-10 9.948173463961744 -0.19369411761053434 TPQS(ph)PAPCVLLR ddPTM_A549_PD325901_60min_R1 1 TPQSPAPCVLLR 12 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 T(0.065)PQS(0.935)PAPCVLLR 79.089 0.00093276 5134700.0 4140.7 4135.9 4149.1 4779.3 4882.1 4353.4 4286.2 4535.8 4501.7 5013.5 6257.6 True False 4561.060815777769 4484.446807942313 4430.682876565154 5074.506506422167 4539.198138330665 4317.947353765171 4449.3136864986345 4445.329910733737 4312.509204083443 4696.9467543907385 5487.954870194678 0.8311039218906644 0.8171435286936376 0.8073468134055523 0.9246625794942362 0.827120165106176 0.78680445737922 0.8107416682055917 0.8100157555734501 0.7858135327432937 0.8558646828347771 1.0 12.422052902321857 -10.785534534717565 0.9614694389339897 1.0032748182837719 0.8213339248365075 0.23185744551383536 0.05438090902572383 0.22379078133137711 0.35655149619961013 0.028703392166150733 0.00672004041405521 1.6385717583100413e-11 10.785534534717565 -0.18194089344726438 TPQS(ph)PTLPPAK ddPTM_A549_MK2206_60min_R1 1 TPQSPTLPPAK 11 0 P78310-7;P78310-2;P78310-6;P78310 P78310-7 CXADR Coxsackievirus and adenovirus receptor 1 T(0.417)PQS(0.533)PT(0.05)LPPAK 105.66 0.00017134 27417000.0 13334.0 13340.0 14159.0 12073.0 17962.0 14275.0 13095.0 13764.0 18849.0 18776.0 20192.0 True False 15584.453214999103 14018.949020253105 16166.959107287366 15030.885541977566 15319.813594117526 15785.571025021893 15474.191995574469 15715.089150482163 14579.731595667883 14534.488559501673 15177.769129150294 1.0267947207780184 0.9236501689387561 1.065173608171259 0.9903224521388572 1.009358718251579 1.0400455357239726 1.0195300682137052 1.0354017785327816 0.9605977974500992 0.9576169222120303 1.0 13.889672134543295 -8.763639856335658 24.999955506313928 0.9813934052685503 1.0126303894989717 0.19672045508159597 0.03573763538461276 83.06952174584656 943766.0751442221 0.005932718973168327 0.0064664444207357535 1.7232970463939429e-09 8.763639856335658 0.031236984230421316 TPQS(ph)PTLPPAK ddPTM_A549_PD325901_60min_R1 2 TPQSPTLPPAK 11 0 P78310-7;P78310-2;P78310-6;P78310 P78310-7 CXADR Coxsackievirus and adenovirus receptor 1 T(0.004)PQS(0.609)PT(0.387)LPPAK;T(0.001)PQS(0.993)PT(0.006)LPPAK 135.13 5.0199e-08 96226000.0 42138.0 44619.0 45041.0 46230.0 54680.0 49635.0 47950.0 49373.0 55074.0 55092.0 59895.0 True False 46415.81873964392 48379.199720394136 48097.753113535706 49085.52210405224 50839.46543575938 49230.78901643182 49774.76348924682 48388.21678263077 52759.43130499401 51613.48171794048 52528.29470568754 0.8836346011175232 0.9210121895534492 0.9156541894806245 0.9344587022875019 0.9678491510263078 0.9372242006383147 0.9475800379230171 0.9211838506036919 1.0044002304015676 0.982584376803536 1.0 15.680807128717841 -7.394047424764322 0.3019648402528321 1.0122730863372218 0.8824445223072959 0.6159946709585784 0.022418822066910305 0.9227001858031938 0.1644213313268742 0.013880791209329734 0.041675646201737644 4.0360131747672294e-08 7.394047424764322 -0.12982856402992593 TPQSPT(ph)LPPAK ddPTM_A549_MK2206_60min_R1 2 TPQSPTLPPAK 11 0 P78310-7;P78310-2;P78310-6;P78310 P78310-7 CXADR Coxsackievirus and adenovirus receptor 1 T(0.402)PQS(0.185)PT(0.413)LPPAK;T(0.36)PQS(0.239)PT(0.402)LPPAK 113.77 2.5416e-05 38046400.0 14000.7 14596.8 13360.2 11927.9 20315.3 15329.2 14127.8 15772.4 22877.9 20314.2 22637.8 True False 16363.67587574906 15339.714772026275 15254.877255821792 14850.236035463784 17326.94628151517 16951.325769300565 16694.63838679472 18008.186000949197 17696.09217849913 15725.208111175376 17016.20948850428 0.9616522344064903 0.9014766057264045 0.8964909174471318 0.8727111666964507 1.018261222819384 0.9961869463791247 0.9811020720021809 1.0582959743834297 1.0399550023437454 0.9241310834706713 1.0 14.054622079253917 -6.772267937154489 24.97103706520875 1.0176214260172138 0.9067828798615588 0.5497502711412703 0.039661395590796365 72.88050178649416 168065.2062142665 0.0042860306462596766 0.008157206082939447 1.689398338971919e-07 6.772267937154489 -0.11083854615565503 TPRPAS(ph)PGPSLPAR ddPTM_A549_PD325901_60min_R1 1 TPRPASPGPSLPAR 14 1 Q8IY33;Q8IY33-3;Q8IY33-5 Q8IY33 MICALL2 MICAL-like protein 2 1 T(0.015)PRPAS(0.955)PGPS(0.03)LPAR 63.302 0.0015827999999999999 7274300.0 2029.6 2400.3 2030.3 1624.2 2069.8 2088.7 2233.5 2326.7 2326.2 2392.4 2633.2 True False 2235.643497887449 2602.581704853582 2168.0883671857105 1724.5231451741656 1924.4243884223615 2071.6903197062784 2318.4970647180967 2280.2921432391604 2228.437903578404 2241.3434557104624 2309.3330932300937 0.968090529876929 1.1269841117693928 0.9388374390604595 0.7467624095587064 0.8333247352077064 0.8970946312506952 1.0039682328698565 0.9874245295855899 0.9649703241646529 0.9705587566735411 1.0 11.1732605640074 -7.761938269477546 24.999972245317707 0.9847970162851533 0.9172359185533626 0.12567851430620725 0.08777890550276089 24.900818203668443 1247831.1383264686 0.01481149500757268 0.02115806289600696 1.730062252408388e-08 7.761938269477546 -0.06756109773179064 TPRS(ph)PLSGIPVR ddPTM_A549_PD325901_60min_R1 1 TPRSPLSGIPVR 12 1 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 T(0.027)PRS(0.972)PLS(0.001)GIPVR 94.48700000000001 7.2957e-05 20403000.0 1048.4 856.66 997.75 1017.3 1225.6 1173.3 744.36 1164.3 980.95 918.6 1275.0 True False 1154.8327962087121 928.8537446485316 1065.4633149581546 1080.1363105440694 1139.5180840904666 1163.7450338063747 772.6870271294214 1141.077123124319 939.724082845515 860.5994392307438 1118.1830828909194 1.032776129310631 0.8306812711269955 0.9528522933861022 0.9659744697187825 1.0190800607932542 1.0407464140824423 0.6910201369991557 1.0204743217668881 0.8404027007956323 0.7696409044266471 1.0 10.126940708222495 TPRT(ph)PQLK ddPTM_A549_MK2206_60min_R1 3 TPRTPQLK 8 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 T(0.208)PRT(0.792)PQLK;T(0.198)PRT(0.802)PQLK;T(0.351)PRT(0.649)PQLK 65.87899999999999 0.0034621 440978000.0 10054.1 10801.5 10688.2 11573.6 14617.9 12227.1 11857.1 12493.400000000001 17479.6 19491.0 19342.1 True False 11750.986280855153 11351.25021306327 12203.947477258906 14409.132519558656 12467.626274215034 13520.963606307902 14011.381589211605 14264.377709432849 13520.498509185441 15087.96956291259 14538.922755197003 0.8082432569947254 0.7807490557720801 0.8393983297625369 0.9910729124967699 0.857534391243562 0.9299838670285783 0.96371525078797 0.9811165482899331 0.9299518772360544 1.0377639263211111 1.0 13.827632757932841 -2.7958097618445623 0.26629822402794706 0.9811510919943217 3.407630739895192e-11 0.6916929225979547 0.04537038590876988 12.492627254268633 0.22497737781473978 0.01797076896132708 5.2382348128843725 0.0016002588517619722 2.7958097618445623 -0.9811510919602454 TPRT(ph)PQLK ddPTM_A549_PD325901_60min_R1 6 TPRTPQLK 8 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 T(0.015)PRT(0.985)PQLK;T(0.26)PRT(0.74)PQLK;T(0.187)PRT(0.813)PQLK;T(0.333)PRT(0.667)PQLK;T(0.1)PRT(0.9)PQLK;T(0.079)PRT(0.921)PQLK 98.04 0.00096809 1749109000.0 37906.3 40540.6 41328.100000000006 41049.0 49248.1 47544.299999999996 45351.4 47296.2 47945.0 45326.899999999994 48049.200000000004 True False 41754.519670856826 43957.09863924806 44132.87339205423 43584.50350095698 45789.08335272166 47157.114984062435 47077.27234423831 46352.84018784888 45930.03838322869 42464.95179846287 42139.45300897441 0.9908652507180005 1.0431340584768993 1.047305321752878 1.0342921036890256 1.08660839387189 1.1190727837406769 1.1171780595778569 1.0999867553567235 1.0899533597041946 1.0077243240300044 1.0 15.362883966928168 -4.726138056481363 1.086491386866134 1.0605860952450146 0.8539723102984527 0.23617166012002222 0.039200652108212046 7.197693692066805 3.016382255406712 0.007177840075340927 2.2673522454229023 1.8787195017460613e-05 4.726138056481363 -0.2066137849465619 TPRT(ph)PRT(ph)PQLK ddPTM_A549_PD325901_60min_R1 3 TPRTPRTPQLK 11 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 T(0.425)PRT(0.672)PRT(0.903)PQLK;T(0.084)PRT(0.92)PRT(0.996)PQLK;T(0.326)PRT(0.675)PRT(1)PQLK 89.541 8.9378e-05 428280000.0 13111.2 12555.0 14057.6 14064.9 14893.900000000001 13899.8 14020.7 14744.3 16522.0 16776.600000000002 17692.3 True False 14442.239372044696 13613.053911776336 15011.633271216 14933.656929294497 13847.803845165636 13786.604637263998 14554.26541092143 14450.21336982041 15827.637796802679 15717.322612887529 15516.259260730209 0.9307810039367074 0.8773412252932216 0.9674776000429848 0.9624521399361888 0.8924705118979783 0.8885263133077598 0.9380009167387743 0.9312949163199514 1.0200678869075444 1.0129582361817187 1.0 13.921493166682795 -8.72421933070098 6.319361927900056 1.009501826761236 0.9226965281867643 0.6682680041223609 0.02745265095969912 0.07974016371442373 8.639179345417249 0.0048075077074337036 0.005401012018975442 1.887038102079987e-09 8.72421933070098 -0.08680529857447161 TPS(ph)ASSLYSGSAQSSR ddPTM_A549_PD325901_60min_R1 1 TPSASSLYSGSAQSSR 16 0 Q6UXY1-2;Q6UXY1 Q6UXY1-2 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 T(0.162)PS(0.83)AS(0.006)S(0.001)LYSGSAQSSR 60.918 0.004067800000000001 8384400.0 4832.3 5299.9 4102.1 3925.4 4421.4 4202.8 4683.5 4824.9 4166.8 4987.5 6352.3 True False 5322.871538648758 5746.5411730006645 4380.4931739311905 4167.863042769776 4110.8561170019475 4168.573790233897 4861.733155409538 4728.663584439175 3991.6838864373203 4672.588398827925 5571.007370547442 0.9554594321288251 1.0315084491507274 0.7863018090928743 0.7481345411252285 0.7379017552076922 0.7482621208279369 0.8726847465886216 0.8487986588275698 0.71651025046931 0.8387331209667322 1.0 12.44372250937049 -5.759177112944533 24.99996281486664 0.8346536184312392 0.9934839743039268 0.40567776482385254 0.08118440888185464 64.6077693486319 713919.6005116284 0.015808257443539697 0.0558613030625913 1.7410966786726093e-06 5.759177112944533 0.15883035587268757 TPS(ph)DDEEDNLFAPPK ddPTM_A549_MK2206_60min_R1 1 TPSDDEEDNLFAPPK 15 0 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 T(0.189)PS(0.811)DDEEDNLFAPPK 184.48 2.6943e-33 7175600.0 2007.1 2157.0 1820.7 1932.9 3191.4 2310.4 2004.2 2630.6 3135.0 3015.1 2968.5 True False 2345.8494111162986 2266.782086708092 2078.9026376607176 2406.46058677118 2721.949287622015 2554.884994480602 2368.337197214995 3003.495605874625 2424.9275055662793 2333.986815922105 2231.339523567879 1.0513188989568563 1.0158839848287815 0.9316836885211368 1.0784824816455028 1.2198723048967726 1.1450005557179297 1.0613970541910442 1.3460504661666548 1.086758639800749 1.0460025429882112 1.0 11.123694337329413 -6.425684954874926 9.942354951907928 1.087560339905508 1.0015538574045888 0.18079575531764525 0.09782497403950383 0.8066139492472896 78.00449253465412 0.015467824580884068 0.035967717916506825 3.7524511317423005e-07 6.425684954874926 -0.08600648250091925 TPS(ph)EADR ddPTM_A549_PD325901_60min_R1 1 TPSEADR 7 0 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 T(0.181)PS(0.819)EADR 48.423 0.057083 3903600.0 430.85 399.28 365.64 316.56 446.13 520.82 376.89 416.33 343.92 659.08 665.62 True False 474.589574824994 432.92872687328185 390.45452917193677 336.1131922400774 414.7953678649474 516.578614597321 391.23275519212166 408.02597154543326 329.46623841401646 617.4655763207038 583.7529597128267 0.8129972909404435 0.741630033167212 0.6688694638293881 0.5757798511298786 0.7105666206283616 0.8849267588321065 0.6702026065693713 0.6989702831590933 0.5643932641919197 1.0577515129421557 1.0 9.189214149290288 -10.952081228410279 1.2046286113550082 1.0006102334748868 0.6911655122659424 0.6471698976549646 0.09126577324157686 0.26893020037900045 0.6914964394225932 0.06879812182420267 0.015898147681129602 1.1166543744321614e-11 10.952081228410279 -0.3094447212089444 TPS(ph)EADRWLEEVSK ddPTM_A549_MK2206_60min_R1 1 TPSEADRWLEEVSK 14 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 T(0.201)PS(0.799)EADRWLEEVSK 56.817 0.0037071999999999995 11640000.0 739.68 863.48 414.17 469.05 788.05 772.33 525.58 662.98 1065.4 1241.1 1017.3 True False 864.5199005602625 907.4274437787227 472.9055338276155 583.9672710564545 672.1288889235224 854.0574479688374 621.0710827822853 756.9594452910969 824.0886010941992 960.7346480186146 764.6763339483255 1.1305697092734717 1.1866817416635833 0.6184388254646482 0.7636790170309066 0.8789717414857812 1.1168875118169306 0.8122012611210947 0.9899082941178744 1.0776959669185848 1.2563938562842174 1.0 9.57870541441997 -8.516633198705831 23.41355066782817 1.0365377955269228 0.9246092053066249 0.13570810512132048 0.17419830254350413 241.99107114990557 907189.2297559103 0.027732924759799455 0.032014208858882474 3.0434544152741605e-09 8.516633198705831 -0.11192859022029789 TPS(ph)EADRWLEEVSK ddPTM_A549_PD325901_60min_R1 3 TPSEADRWLEEVSK 14 1 P49757-4;P49757-2;P49757-3;P49757;G3V3Z8;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5 P49757-4 NUMB Protein numb homolog 1 T(0.089)PS(0.911)EADRWLEEVSK;T(0.098)PS(0.902)EADRWLEEVSK;T(0.251)PS(0.749)EADRWLEEVSK 121.19 5.635e-07 33188100.0 2166.47 2192.7 2074.18 2182.33 2007.1599999999999 2213.21 2403.8500000000004 1975.6 2391.7200000000003 2080.55 3145.79 True False 2386.4084395290806 2377.486524281318 2214.9463278575863 2317.127567668968 1866.1840059260933 2195.1863515474374 2495.329827187195 1936.1951081717807 2291.2043258303415 1949.183717931116 2758.8777728058226 0.8649924483976198 0.8617585554953296 0.8028432247670584 0.8398804725997021 0.6764286639738137 0.7956809008305207 0.9044727721480045 0.701805323619915 0.8304841730991765 0.7065132559130248 1.0 11.429865826720079 -10.315113074250174 0.7468399179736167 0.9991355500506015 0.8062134796275838 0.0 0.10724322155932697 0.38854705525207556 0.402471888785841 0.0409014868030297 0.01312789102231228 4.840463233831835e-11 10.315113074250174 -0.19292207042301768 TPS(ph)EAER ddPTM_A549_MK2206_60min_R1 3 TPSEAER 7 0 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 T(0.123)PS(0.877)EAER;T(0.123)PS(0.877)EAER;T(0.017)PS(0.983)EAER 75.696 0.018016 137674000.0 4170.82 4470.98 4050.84 3280.49 2180.83 1971.11 1555.42 1679.03 1941.96 6329.79 5990.23 True False 4874.752449241234 4698.5337849003945 4625.310024024573 4084.2101972667897 1860.032795928031 2179.691551883077 1838.0196803174063 1917.0376443137197 1502.1091606728842 4899.886042769922 4502.690569062499 1.0826310123851575 1.0434947089599078 1.0272324853509986 0.907059931084085 0.4130936308855233 0.4840864630715471 0.4082047504987887 0.4257538053992603 0.3336025733133238 1.0882129179465518 1.0 12.13657162180936 -6.584186528248891 5.444265464805296 0.6064487792680134 1.038576800214563 0.44173911639476815 0.2313522157942774 0.17257523955555695 10.172952357096582 0.039291582839719466 0.08343224953388706 2.605034454778103e-07 6.584186528248891 0.43212802094654956 TPS(ph)EAER ddPTM_A549_PD325901_60min_R1 4 TPSEAER 7 0 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 T(0.015)PS(0.985)EAER;T(0.026)PS(0.974)EAER;T(0.005)PS(0.995)EAER;T(0.016)PS(0.984)EAER 103.87 0.010255 412324000.0 12091.800000000001 11750.6 10813.3 11650.2 13552.7 12093.0 10897.1 12115.2 11684.6 13186.7 12880.300000000001 True False 13319.350634487326 12740.864300734283 11547.155563655238 12369.806394476083 12600.805106276812 11994.51861742137 11311.795103621924 11873.55283180947 11193.536896291049 12354.0895115437 11296.104754948954 1.1791100492983624 1.1278989153453418 1.0222245467931144 1.0950506092869516 1.1155000223201943 1.0618278493005682 1.0013890052379424 1.0511192211286398 0.9909200683879131 1.09365925507474 1.0 13.463537752232282 -2.0000000000018034 0.20780098742612518 0.983218074868889 1.886192993492926 0.36825917649740314 0.04609255174500942 19.504936126615434 0.22080807656292278 0.025692524885771353 5.879919090583524 0.009999999999958474 2.0000000000018034 0.902974918624037 TPS(ph)FELPDASERPPT(ph)YCELVPR ddPTM_A549_PD325901_60min_R1 1 TPSFELPDASERPPTYCELVPR 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 2 T(0.477)PS(0.521)FELPDAS(0.028)ERPPT(0.746)Y(0.227)CELVPR 44.05 0.024288 1892800.0 514.71 594.05 725.29 586.63 556.27 614.12 433.95 748.81 512.88 518.23 722.93 True False 566.9629802905248 644.1126783186563 774.5125409230773 622.8648027666051 517.19951422732 609.1188103308369 450.46420471655136 733.8743971199187 491.32543718824337 485.508869358315 634.0141930308489 0.8942433568879717 1.0159278536644938 1.2216012660861555 0.9824146046148508 0.8157538425991592 0.9607337138921106 0.7104954584110286 1.1575046823663315 0.7749439091252918 0.7657697172951013 1.0 9.30837132664734 -6.526429901496328 24.423206919901393 0.8983213926894115 1.0512717555542352 0.20551615462394135 0.1385696406088017 93.20015528832806 640987.9537671144 0.019185023853536112 0.04009605380163796 2.975569500158798e-07 6.526429901496328 0.15295036286482377 TPS(ph)FELPDASERPPTYCELVPR ddPTM_A549_MK2206_60min_R1 1 TPSFELPDASERPPTYCELVPR 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.12)PS(0.879)FELPDAS(0.001)ERPPTYCELVPR 55.049 0.0017637 6302400.0 1020.9 1327.8 911.75 847.11 1422.5 990.83 922.93 1391.9 1646.6 1721.9 1955.7 True False 1193.2029613913742 1395.3793485076521 1041.0498598820018 1054.6519880282126 1213.2521343743547 1095.6789729402767 1090.6144344005763 1589.2060875149741 1273.647729079884 1332.9215940885122 1470.045715425873 0.811677452524463 0.9492081326895403 0.7081751601040578 0.717428020748783 0.8253159215683813 0.7453366663654116 0.7418915091933892 1.0810589567648787 0.8664000824701615 0.9067211856757558 1.0 10.521645305296978 -8.239010771547997 24.9707337942925 0.9459594651945896 0.7862523985461412 0.5235395933835959 0.08104062282390598 558.2065950131483 621476.2115817232 0.013814369414170097 0.017827719893693937 5.7675215837374675e-09 8.239010771547997 -0.15970706664844847 TPS(ph)FELPDASERPPTYCELVPR ddPTM_A549_PD325901_60min_R1 1 TPSFELPDASERPPTYCELVPR 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.166)PS(0.834)FELPDASERPPTYCELVPR 64.315 0.00031245 11115000.0 1434.7 1295.0 1581.1 1680.1 2070.9 1773.0 1293.0 1587.9 1438.0 1578.0 1593.5 True False 1580.3496878296817 1404.1341948028955 1688.4029539266728 1783.8759612160545 1925.447128217156 1758.5612758362774 1342.2058225567496 1556.2280888165476 1377.5658607797027 1478.3648106968349 1397.509602028768 1.1308327939468066 1.0047402842631712 1.2081512366538407 1.2764677671097195 1.377770231719324 1.2583536265392163 0.9604269055527533 1.113572376574277 0.9857290846373341 1.0578566390890547 1.0 10.448642480254128 -7.762480825118082 24.99998766234591 1.001788487594322 1.2107307986718672 0.4764574197572098 0.09578626377113607 17.790505953880984 427068.12923343375 0.015785395769005995 0.022493940159596087 1.727902268814382e-08 7.762480825118082 0.20894231107754524 TPS(ph)FHIK ddPTM_A549_PD325901_60min_R1 2 TPSFHIK 7 0 O60890 O60890 OPHN1 Oligophrenin-1 1 T(0.074)PS(0.926)FHIK;T(0.129)PS(0.871)FHIK 59.8 0.009048 19835000.0 2933.6000000000004 3127.8 4034.3 3591.6000000000004 4274.9 3694.9 3940.2999999999997 3980.1 3722.0 4138.7 4309.1 True False 3231.4169123978218 3391.3906830150554 4308.091858216672 3813.44497488458 3974.645771604382 3664.8099594401924 4090.2502727148944 3900.7137831719506 3565.577283603654 3877.381775685041 3779.1080176354976 0.8550739744188752 0.8974050668011792 1.1399758456526332 1.0090859951842728 1.0517417742642954 0.9697552814944891 1.0823321941652442 1.0321784307220039 0.9434970545865887 1.0260044850771508 1.0 11.883830040169174 -5.543312048450208 24.99856884821664 1.0003327545794094 0.8656566336166719 0.47508106994220967 0.05632226622036165 143.6611580846439 175758.20802812488 0.008233221524673543 0.031893585771653576 2.862120745330748e-06 5.543312048450208 -0.1346761209627375 TPS(ph)GEFLER ddPTM_A549_MK2206_60min_R1 2 TPSGEFLER 9 0 B3KT28;Q9UNN5;B1ANM7;Q9UNN5-2 B3KT28 FAF1 FAS-associated factor 1 1 T(0.092)PS(0.908)GEFLER;T(0.478)PS(0.522)GEFLER 104.82 0.00059367 11422600.0 1857.03 2044.97 1622.92 1437.8999999999999 2136.9700000000003 1891.65 1532.26 2090.07 2599.9300000000003 2898.9 2654.33 True False 2170.451263975535 2149.0502382269133 1853.0744596651477 1790.1855645497833 1822.6245438270412 2091.823147424355 1810.6518081053025 2386.3438230709257 2011.050006235069 2244.036476626511 1995.1866052187738 1.0878437426846814 1.0771174147850036 0.9287725041948929 0.8972521967956416 0.9135108160107104 1.0484348391036762 0.9075100060160854 1.1960504430157104 1.0079508357638336 1.1247251113037875 1.0 10.962307969372281 TPS(ph)GEFLER ddPTM_A549_PD325901_60min_R1 1 TPSGEFLER 9 0 B3KT28;Q9UNN5;B1ANM7;Q9UNN5-2 B3KT28 FAF1 FAS-associated factor 1 1 T(0.441)PS(0.559)GEFLER 72.006 0.0028462 8412000.0 1748.6 1564.2 1835.8 1528.0 2231.1 1666.5 1847.7 2139.1 1959.7 1746.4 2281.6 True False 1926.1165847487161 1696.0206235603782 1960.3884275621965 1622.3810896602158 2074.3952328771525 1652.928576526314 1918.015234600237 2096.433972408512 1877.3406240403228 1636.132005957511 2000.9776642540553 0.9625877485577798 0.8475959796346042 0.9797152974683553 0.8107942025754813 1.0366908486459625 0.8260604833600226 0.958539052616189 1.0477048344215487 0.938211684007066 0.8176663014214328 1.0 10.9664893480328 -7.983361861098513 24.907439662387905 0.97707545181056 0.91040539213154 0.02635963560252219 0.08360734369616211 285.06780798781585 426747.46282228106 0.009700694614291154 0.013401641550345953 1.0390540486196027e-08 7.983361861098513 -0.06667005967901996 TPS(ph)IDLQR ddPTM_A549_MK2206_60min_R1 1 TPSIDLQR 8 0 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 T(0.406)PS(0.594)IDLQR 63.426 0.0098971 5106300.0 898.36 1164.3 803.81 522.65 1153.6 852.3 875.73 735.66 1498.1 994.77 1320.3 True False 1049.9812052067346 1223.5578968726156 917.8023448003855 650.6992734626498 983.9069681646797 942.4898202890483 1034.8388053672725 839.9420578642615 1158.782741974113 770.0507661022297 992.4330715737483 1.0579869164796467 1.232887065051512 0.9248002420404862 0.6556606103732567 0.991408888263318 0.9496759502325909 1.0427290615439482 0.8463462997382035 1.1676180239908531 0.7759221131971383 1.0 9.954826001789085 -8.770197131574003 24.99813966161769 1.07915294609639 0.9633882268006283 0.0 0.16645257875412714 318.74187913030977 909814.0060868126 0.026024230284817013 0.02790923858953982 1.6974729738326009e-09 8.770197131574003 -0.11576471929576171 TPS(ph)IDLQR ddPTM_A549_PD325901_60min_R1 2 TPSIDLQR 8 0 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 T(0.147)PS(0.853)IDLQR;T(0.14)PS(0.86)IDLQR 106.88 0.0018715999999999997 14662200.0 3707.5 3243.6 3761.0 3979.8 4328.1 3988.9 3452.9 4167.1 3948.8 4576.1 4770.7 True False 4083.8826706827526 3516.949555415189 4016.244076730261 4225.623207218413 4024.1091871344197 3956.4157209155783 3584.30199899938 4083.983921473293 3782.8456683219015 4287.164265037887 4183.934143958985 0.9760867475840429 0.8405843482247853 0.9599204811885376 1.009964082087578 0.9618003172790541 0.9456209358907066 0.8566822219643705 0.9761109474846762 0.9041360447280942 1.0246729794320382 1.0 12.030644428089312 -10.974997979972924 1.2230069737411235 1.0002759466058417 0.9333853531483212 0.2424067820610465 0.049842991234647284 0.6229806570158029 1.6459006114747055 0.03504538267679883 0.007938107043287653 1.0592586520788968e-11 10.974997979972924 -0.06689059345752058 TPS(ph)PAAEDAREPEAK ddPTM_A549_MK2206_60min_R1 2 TPSPAAEDAREPEAK 15 1 Q92797 Q92797 SYMPK Symplekin 1 T(0.165)PS(0.835)PAAEDAREPEAK;T(0.023)PS(0.977)PAAEDAREPEAK 132.79 5.739400000000001e-10 796970000.0 7121.6 6797.2 7532.4 6199.6 9339.6 7800.3 8415.3 7475.299999999999 10540.4 8813.9 8609.099999999999 True False 8323.551973596646 7143.1484468114295 8600.607583849947 7718.502278310624 7965.757212093312 8625.722568579913 9944.25108059243 8534.946667146123 8153.016229560069 6822.833868480599 6471.222870927487 1.2862409686105702 1.1038328596133855 1.3290544546825764 1.1927424587687507 1.230950837419021 1.3329354807623297 1.5366880849163478 1.3189078536438745 1.2598880292298664 1.0543345523042877 1.0 12.659822649602967 -10.315101977314795 0.8416116108908168 1.0099724604473885 1.2872463977475281 0.4846976037303523 0.10295682714168586 0.379453390454524 0.512604738869002 0.059319112147523376 0.021179215994559946 4.8405869171762035e-11 10.315101977314795 0.2772739373001396 TPS(ph)PAAEDAREPEAK ddPTM_A549_PD325901_60min_R1 2 TPSPAAEDAREPEAK 15 1 Q92797 Q92797 SYMPK Symplekin 1 T(0.451)PS(0.549)PAAEDAREPEAK;T(0.213)PS(0.787)PAAEDAREPEAK 222.45 4.746499999999999e-54 25379000.0 7621.4 6904.3 7484.7 6830.1 7194.299999999999 7260.7 7723.4 7748.299999999999 7312.1 7234.1 7913.6 True False 8395.118917421856 7486.149591642956 7992.656751157402 7251.979764717437 6688.997186987632 7201.571266477416 8017.318213406644 7593.7540780762365 7004.797865512706 6777.337691420771 6940.2773684435915 1.2096229691904263 1.0786527964547015 1.151633620220832 1.0449120949677184 0.9637939280930625 1.0376489128837831 1.1551870030238556 1.0941571460247261 1.0092965300439547 0.9765225986840694 1.0 12.76077760597885 -2.0000000000000004 0.25576439688588115 1.0046616898865928 2.1223712208521435 0.4228515460630399 0.0580103330978448 32.90318177218039 0.40198782869147115 0.027013775960488113 16.203364050805956 0.00999999999999999 2.0000000000000004 1.1177095309655507 TPS(ph)PAPK ddPTM_A549_PD325901_60min_R1 1 TPSPAPK 7 0 Q96P11-2;Q63ZY6;Q3KNT7-3;Q63ZY6-6 Q96P11-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C 1 T(0.258)PS(0.742)PAPK 68.016 0.023086000000000002 14354000.0 1980.5 2013.1 2048.0 1931.7 2090.8 2071.7 2332.5 2041.5 1823.9 2724.0 2128.6 True False 2181.5589020329576 2182.7510019750644 2186.989595624456 2051.0167217909943 1943.9494208684284 2054.8287620699457 2421.264563892975 2000.780680974231 1747.2478257831033 2552.006175119253 1866.7956943071456 1.1686114922407913 1.1692500730698248 1.1715205912964939 1.0986830149896085 1.0413294967395552 1.100725038276129 1.2970163640706374 1.0717727103590806 0.9359609255106986 1.3670516719647892 1.0 10.866348329559697 -8.563496455218251 5.638860360289775 0.9706621173321616 1.1460036037584105 0.0 0.1345377237053248 0.09237319465842186 7.342236009949087 0.011020944271790659 0.012588082583363991 2.7321437439862646e-09 8.563496455218251 0.17534148642624892 TPS(ph)PARPALR ddPTM_A549_MK2206_60min_R1 1 TPSPARPALR 10 1 Q9H211 Q9H211 CDT1 DNA replication factor Cdt1 1 T(0.132)PS(0.868)PARPALR 43.382 0.051788 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TPS(ph)PKEEDEEPES(ph)PPEKK ddPTM_A549_MK2206_60min_R1 1 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 T(0.454)PS(0.546)PKEEDEEPES(1)PPEKK 128.97 5.938100000000001e-13 39132000.0 6699.1 8221.7 7372.8 7408.5 10120.0 8122.3 6985.1 7357.6 10057.0 11063.0 11098.0 True False 7829.7443027299 8640.149412279987 8418.373903962733 9223.582832580203 8631.361405882933 8981.796394853618 8254.202253401083 8400.562331704996 7779.105557728886 8563.860616412805 8342.060310781986 0.9385863936526656 1.0357332709657738 1.009148051001515 1.1056720389157175 1.0346798134181587 1.0766880195345487 0.9894680625519636 1.0070128983420794 0.9325161012890917 1.0265881925289062 1.0 13.026188027211877 -8.181400192762668 2.2043807827609174 0.9690736657994939 1.034956384126341 0.09480478141849624 0.046775956467327844 0.29390030299009573 2.799272640435011 0.007693506244923851 0.010123867330844135 6.585667608478456e-09 8.181400192762668 0.065882718326847 TPS(ph)PKEEDEEPES(ph)PPEKK ddPTM_A549_PD325901_60min_R1 4 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 T(0.129)PS(0.871)PKEEDEEPES(1)PPEKK;T(0.433)PS(0.567)PKEEDEEPES(1)PPEKK;T(0.113)PS(0.887)PKEEDEEPES(1)PPEKK;T(0.143)PS(0.857)PKEEDEEPES(1)PPEKK 138.25 1.1811e-13 110673600.0 12432.899999999998 12558.900000000001 12296.3 14442.7 16389.5 16366.6 13727.599999999999 15119.699999999999 16367.0 17316.100000000002 15890.2 True False 13695.07885538276 13617.282578463386 13130.800861658696 15334.792777248433 15238.358060705534 16233.315835928937 14250.01133003096 14818.1257223248 15679.15190777567 16222.758490815888 13935.806136277091 0.9827259881100326 0.9771435140027861 0.9422347536449406 1.1003879235467806 1.093467999747621 1.1648637816273195 1.0225466105570988 1.0633131357755394 1.1250983082320853 1.164106211881457 1.0 13.766508839125772 -6.26003834928993 24.999333181936365 1.0701732044809884 0.9683456251738751 0.4963155871152871 0.05262877650846829 97.48902818829919 1739532.8259649698 0.007847462957115223 0.01958116240046439 5.494923501651996e-07 6.26003834928993 -0.10182757930711328 TPS(ph)PPPPIPEDIALGK ddPTM_A549_MK2206_60min_R1 1 TPSPPPPIPEDIALGK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.093)PS(0.907)PPPPIPEDIALGK 91.20700000000001 9.7972e-06 3517900.0 1303.1 1376.1 1334.8 1385.4 1395.6 1320.0 1551.5 1284.3 1825.8 1802.3 1780.5 True False 1523.0314222637876 1446.137612201673 1524.0947112371764 1724.8230621929683 1190.309088740141 1459.6815238549148 1833.3874670587088 1466.3534580037947 1412.259215203481 1395.1591782482872 1338.352710699885 1.137989567389396 1.0805354975860006 1.1387840432886773 1.2887656956221807 0.8893837022362175 1.0906553348642911 1.3698836281356264 1.095640518587191 1.0552219933599918 1.0424450648130683 1.0 10.386242659923807 -8.805969020378997 2.9124798276645194 1.0235128784980991 1.1387040937709674 0.1466377667155292 0.11512855717500145 0.3441616354047486 5.714940831893708 0.020676411618918963 0.022145305591694198 1.5632591509625663e-09 8.805969020378997 0.11519121527286824 TPS(ph)PPPPIPEDIALGK ddPTM_A549_PD325901_60min_R1 2 TPSPPPPIPEDIALGK 16 0 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.107)PS(0.893)PPPPIPEDIALGK;T(0.126)PS(0.874)PPPPIPEDIALGK 92.935 8.174e-06 11673600.0 3584.9 3836.0 3549.1000000000004 3517.9 4772.5 4089.1 3776.4 3933.7000000000003 4023.2000000000003 3981.0 4461.2 True False 3948.836408936104 4159.273182443171 3789.963268472048 3735.1926932694237 4437.29606423119 4055.799725336785 3920.1129685253745 3855.239267572048 3854.118895054871 3729.638980598288 3912.500681876839 1.0092870851697424 1.0630728326027932 0.9686805387734759 0.9546816721518474 1.1341329816976813 1.0366259472167567 1.0019456320311448 0.9853644972970784 0.9850781401540966 0.9532621931222689 1.0 11.93387528814255 -7.899041905785821 4.973634479144853 0.9922562215362499 1.0280406695273785 0.16907524988438316 0.04622398229852032 0.35151590889290324 14.359630239659461 0.007010267317748639 0.009761486354440631 1.26170578465933e-08 7.899041905785821 0.035784447991128565 TPS(ph)QIIR ddPTM_A549_MK2206_60min_R1 1 TPSQIIR 7 0 Q01804-5;Q01804-3;Q01804;D6RI06 Q01804-5 OTUD4 OTU domain-containing protein 4 1 T(0.158)PS(0.842)QIIR 47.603 0.059078 9993100.0 1092.6 1252.7 1094.7 857.75 1234.4 999.81 941.61 926.59 1364.9 1423.1 1510.8 True False 1277.004168494677 1316.4570792856873 1249.9449208805336 1067.8987885058611 1052.821395199792 1105.6092305798343 1112.6883486027393 1057.9369700628645 1055.7523292974206 1101.6207216141252 1135.6266640412175 1.124492942029343 1.159234034362112 1.1006653510868665 0.9403607913763302 0.9270840748430859 0.9735675161460512 0.9798011827611987 0.9315887021339495 0.9296649706519238 0.9700553504916136 1.0 10.149272913113556 -6.1616554900868055 4.092581919947578 0.9607796268297719 1.139120514592622 0.9093096330077548 0.024257331698709562 0.06016386830322446 1.774222334227795 0.004378535431966212 0.0122987409555243 6.891987957300769e-07 6.1616554900868055 0.17834088776285006 TPS(ph)RTAPGALTAKPPLAPKPGTTVASGVTAR ddPTM_A549_PD325901_60min_R1 1 TPSRTAPGALTAKPPLAPKPGTTVASGVTAR 31 3 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 T(0.191)PS(0.752)RT(0.048)APGALT(0.009)AKPPLAPKPGTTVASGVTAR 53.206 0.0018606999999999999 9484300.0 2131.8 2501.7 2313.9 2903.9 3021.7 3113.2 2300.1 2860.6 3500.4 2652.9 3024.8 True False 2348.218766651787 2712.5270387169126 2470.93516861105 3083.2673077645973 2809.466216299086 3087.8471313781683 2387.6315641630135 2803.543088902714 3353.290360968897 2485.3954412532553 2652.7687757870203 0.8851954184944446 1.022526751473906 0.9314551615520941 1.1622827198159618 1.0590693926822088 1.1640091513298476 0.9000526491249332 1.056836583154882 1.2640718601545085 0.9369061728781436 1.0 11.373283215576146 -4.925187210657776 0.5866836740878228 1.1100385551915488 0.6673612689480273 0.08296572835922711 0.11135906498478687 5.445983465000858 0.9618862019358906 0.0210127889881765 1.7814390829466382 1.1879900120083229e-05 4.925187210657776 -0.44267728624352154 TPS(ph)SDVLVFDYTK ddPTM_A549_MK2206_60min_R1 1 TPSSDVLVFDYTK 13 0 E9PC52;Q16576;Q16576-2;H0YF10;Q5JP01;Q09028-4;Q09028-2;Q09028-3;Q09028 E9PC52;Q09028-3 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 1 T(0.066)PS(0.467)S(0.467)DVLVFDYTK 51.875 0.025254 585770.0 549.51 711.65 472.58 706.58 715.46 622.51 445.81 576.16 909.31 760.14 615.92 True False 642.2538537703731 747.8699452970861 539.5989501322028 879.6921317195817 610.2167817641314 688.3835950113047 526.8079063418904 657.8324444159983 703.3527368696888 588.4238460598419 462.97006547277357 1.3872470418028418 1.6153742997041933 1.1655158516159738 1.90010585419008 1.3180480278805782 1.486885754283799 1.1378876208852233 1.4208962813702353 1.5192186046660325 1.2709760089109823 1.0 8.854775105095841 -10.876738412077463 0.75323901394292 0.9477180482127364 1.4464022805434864 0.189337747350951 0.2142777705865708 0.6821484944639983 0.5636402825250176 0.2196169902173365 0.03528772659544431 1.328194226014667e-11 10.876738412077463 0.49868423233075 TPS(ph)SEEISPTK ddPTM_A549_MK2206_60min_R1 2 TPSSEEISPTK 11 0 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.242)PS(0.752)S(0.006)EEISPTK;T(0.001)PS(0.986)S(0.013)EEISPTK 199.15 5.7310999999999995e-24 54364000.0 7757.0 8709.3 7030.3 7869.7 10871.5 7835.1 8452.2 8828.5 11637.8 11318.599999999999 11024.1 True False 9066.191959558126 9152.56616957199 8027.302253828825 9797.776853284258 9272.316751388966 8664.205081481548 9987.855332951085 10079.966911147316 9001.856881747768 8761.7203988909 8286.511720318227 1.094090283771415 1.1045137542170163 0.9687191094107995 1.1823765154715782 1.1189650198229468 1.0455792948723202 1.2053148140080734 1.2164306588056348 1.0863264526224636 1.057347252331458 1.0 13.016549199062002 -9.950652995104015 1.082164391839135 1.0125156113952054 1.1132284567802628 0.17195371956187921 0.06941691677797361 0.4445706556399481 1.0534529660664809 0.023130356656299877 0.013207080354789775 1.1203326810558958e-10 9.950652995104015 0.10071284538505743 TPS(ph)SEEISPTKFPGLYR ddPTM_A549_PD325901_60min_R1 1 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.031)PS(0.929)S(0.039)EEISPTKFPGLYR 131.09 1.2212e-12 101980000.0 3057.9 3637.1 3636.8 3616.1 4600.0 4081.9 3253.8 4078.5 3882.0 4022.3 4709.9 True False 3368.335756893001 3943.6111814035603 3883.6151178549894 3839.458284241041 4276.911869138498 4048.6583597496306 3377.6251395476793 3997.1511179786457 3718.8530400186432 3768.3312915499864 4130.612158516032 0.8154567961430474 0.954728023368901 0.9402032843602101 0.9295131416115351 1.0354184089447473 0.9801594060102113 0.81770570799877 0.9676897671783997 0.9003152310854289 0.9122936617955923 1.0 12.012139890183292 TPS(ph)SPSK ddPTM_A549_MK2206_60min_R1 1 TPSSPSK 7 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.022)PS(0.489)S(0.486)PS(0.003)K 85.744 0.013465000000000001 33386000.0 5439.9 5050.7 3612.4 2498.7 3364.2 3506.4 2499.8 3605.7 3391.8 6859.5 5939.5 True False 6358.022127214164 5307.759056716074 4124.692639251705 3110.881612170904 2869.3306365287935 3877.4449206400545 2953.981302064686 4116.819016993137 2623.5627155916136 5309.934185870351 4464.558228139273 1.4241100244007894 1.1888654566676418 0.9238747550103708 0.69679494660045 0.6426908307397451 0.8684946466150328 0.6616514224064313 0.922111171279075 0.5876421767904807 1.1893526558580494 1.0 12.124301711161014 -5.663405564762537 2.0314993901585288 0.7866790263739213 1.4222780116506435 0.5489296491580182 0.17086355566228034 0.18492254269504416 1.3325361548458385 0.022309984663544814 0.16066404398009224 2.1706731546479557e-06 5.663405564762537 0.6355989852767222 TPS(ph)SPSK ddPTM_A549_PD325901_60min_R1 1 TPSSPSK 7 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.085)PS(0.454)S(0.454)PS(0.006)K 97.85700000000001 0.011588 75470000.0 8349.8 7438.4 6981.5 6477.0 7272.9 5290.8 4764.2 4963.7 6735.2 7384.8 10198.0 True False 9197.465549202125 8065.260073067072 7455.306573169989 6877.069579665719 6762.076594142912 5247.713478959146 4945.50423807027 4864.695109552682 6452.142966288915 6918.52246770215 8943.710650448307 1.0283724405530827 0.9017800763336186 0.8335809223430422 0.768928004096488 0.756070590656235 0.58674902219652 0.5529588815378742 0.5439235793377145 0.7214167830849378 0.7735628687132623 1.0 13.126657799104834 -5.4563307057439685 1.618073293293736 0.7869822558723496 1.06490158518574 0.2531859685859801 0.1367464550637392 1.1069043641686305 3.620766910652906 0.02627171154048554 0.4262686860374408 3.496787928737011e-06 5.4563307057439685 0.27791932931339036 TPS(ph)SPSKSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_A549_PD325901_60min_R1 1 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.273)PS(0.295)S(0.295)PS(0.062)KS(0.062)PAS(0.013)FEIPASAMEANGVDGDGLNKPAK 67.406 0.00011985 134110000.0 1388.2 1186.7 1312.8 1118.6 1734.7 1441.2 1463.4 1570.9 1374.2 1754.0 1551.3 True False 1529.1290420611733 1286.7073737240125 1401.8945025077073 1187.6933814750778 1612.8606563901205 1429.4633450283366 1519.090487803206 1539.5671671527896 1316.447152909227 1643.2521406604862 1360.4999345009269 1.1239464282827067 0.9457607024406188 1.0304259977946748 0.8729830493602782 1.1854911679813989 1.0506897565950326 1.1165678507441128 1.1316186999432307 0.9676201516262036 1.2078296359957426 1.0 10.409921171793457 -8.815611249633651 24.99990933059222 0.9847094712928046 1.052479610293711 0.0 0.1076931225681573 144.10611743327294 66503.12755418537 0.014330938974772738 0.015256452873529983 1.5289340418342515e-09 8.815611249633651 0.06777013900090645 TPS(ph)SPSKSPASFEIPASAMEANGVDGDGLNKPAKK ddPTM_A549_PD325901_60min_R1 1 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKK 35 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.307)PS(0.334)S(0.334)PS(0.01)KS(0.012)PAS(0.003)FEIPASAMEANGVDGDGLNKPAKK 59.53 0.00040801 9067400.0 658.35 810.77 799.88 719.05 1002.2 1109.5 948.59 1045.5 1183.6 1265.4 881.19 True False 725.1852073483459 879.0964332975619 854.1646668691844 763.4640854189654 931.8089294023049 1100.4645998535525 984.6891115383654 1024.6466823211165 1133.8574080798733 1185.5024280454845 772.8092163236464 0.9383754645139274 1.137533578441957 1.105272360664326 0.9879075835183009 1.2057425166783604 1.423979653204196 1.274168437357229 1.3258727518746394 1.4671892934633723 1.5340169384690743 1.0 9.593968489260439 -6.891980309119906 5.7870720387603605 1.2539929620028445 1.0547273102352623 0.3993482558553415 0.15092854864091146 0.26223651736985576 12.542975358248055 0.026468477663195687 0.05058484662703331 1.282388724749063e-07 6.891980309119906 -0.19926565176758215 TPS(ph)TKPKQENEGGEK ddPTM_A549_PD325901_60min_R1 2 TPSTKPKQENEGGEK 15 2 Q5M775;Q5M775-4;Q5M775-2;Q5M775-5;Q5M775-3 Q5M775 SPECC1 Cytospin-B 1 T(0.432)PS(0.485)T(0.083)KPKQENEGGEK;T(0.131)PS(0.824)T(0.045)KPKQENEGGEK 58.997 0.0015346 37162000.0 2762.6 3106.1 3568.6000000000004 4087.2 3873.8999999999996 4830.9 3781.7 4791.4 3741.3 4185.0 4679.5 True False 3043.0571182813696 3367.8619478588985 3810.786655735074 4339.65706129531 3601.810628229486 4791.558752079792 3925.614662925643 4695.831768219412 3584.066171721213 3920.7583857834334 4103.951165794555 0.7414944757736198 0.8206388945193152 0.9285653025058055 1.0574338938204983 0.8776446119168548 1.1675477018382383 0.9565451693589087 1.1442221358182914 0.8733208624882142 0.9553618518811848 1.0 12.002797848627232 -5.688641158655366 2.466127671304434 0.9733296154123856 0.7504047459764919 0.4417332021411332 0.09301259691477164 0.23945356631647108 2.7349484124895205 0.013433925692659944 0.07661508120374586 2.0481362364155104e-06 5.688641158655366 -0.22292486943589374 TPS(ph)TVTLNNNSAPANR ddPTM_A549_MK2206_60min_R1 2 TPSTVTLNNNSAPANR 16 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 T(0.129)PS(0.741)T(0.129)VTLNNNSAPANR;T(0.007)PS(0.982)T(0.011)VTLNNNSAPANR 168.41 6.9359e-28 27115000.0 3854.6000000000004 4818.0 3964.9 3826.3 5394.4 4275.7 3183.9 3934.1000000000004 6955.3 6091.1 6703.4 True False 4505.162244077964 5063.215620658131 4527.1824397544815 4763.743671769134 4600.890905918469 4728.151736020044 3762.373416930857 4491.770722675955 5379.935655331781 4715.116279547326 5038.760775571812 0.8941012373358221 1.0048533451329695 0.8984713983054147 0.9454196942359369 0.9130996907461533 0.9383560654322751 0.7466862557101439 0.8914435359686662 1.0677100769328054 0.9357690292435528 1.0 12.298853247997165 -8.755259727092904 24.988929290708974 1.0319742048003846 0.9048059932208979 0.2626655958899442 0.06724670592847355 96.7816104583699 391359.519893009 0.010891653779893136 0.0121989400646182 1.7568726130629588e-09 8.755259727092904 -0.12716821157948666 TPS(ph)TVTLNNNSAPANR ddPTM_A549_PD325901_60min_R1 2 TPSTVTLNNNSAPANR 16 0 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 T(0.017)PS(0.899)T(0.084)VT(0.001)LNNNSAPANR;T(0.132)PS(0.735)T(0.132)VTLNNNSAPANR 183.23 5.1388999999999995e-34 50640000.0 10344.400000000001 10246.5 10573.4 11538.599999999999 14285.7 12953.7 11373.2 12670.3 13914.7 13068.400000000001 14472.7 True False 11394.555872855211 11110.008515094876 11290.97450701934 12251.313115938068 13282.321714989526 12848.209361985553 11806.013349653847 12417.580926841933 13329.913548672695 12243.2589937329 12692.649650004234 0.8977287002364719 0.8753104214998301 0.8895679640078598 0.9652289674547175 1.046457759510056 1.012255889532196 0.930145688662407 0.9783285026572675 1.0502073181125147 0.9645944173468001 1.0 13.631705649508355 -6.406360931371193 3.0723609461253685 1.0139043466439357 0.8853988612655922 0.6278922343216022 0.03538021037524695 0.11027630374215674 1.9713490569409962 0.005317102978358566 0.013457245784498431 3.92318753493005e-07 6.406360931371193 -0.1285054853783435 TPSEALWKPTHEDS(ph)KILLVDSPGMGNADDEQQEEGTSSK ddPTM_A549_PD325901_60min_R1 1 TPSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSK 39 2 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 1 T(0.011)PS(0.011)EALWKPT(0.185)HEDS(0.781)KILLVDS(0.012)PGMGNADDEQQEEGTSSK 57.507 0.00037636 3173800.0 709.92 745.13 798.89 630.3 1046.4 964.39 704.4 805.48 915.29 985.97 1141.3 True False 781.9905557845178 807.924720133963 853.1074795158305 669.2321994848397 972.9044738840266 956.5363275824856 731.2063274624703 789.4140695131641 876.8235443067141 923.7156859333066 1000.9273352967889 0.7812660601907198 0.8071761971556127 0.852317095788849 0.6686121718180502 0.9720031010997885 0.9556501194952971 0.7305288822446411 0.7886826962110011 0.8760111882115036 0.9228598853875962 1.0 9.967121526755895 -10.136629225270031 0.46062300966154407 1.0218913554455793 0.8150289865029269 0.25032165362541525 0.08737838472186883 1.0275878907462987 0.3873197282200617 0.09303256217257254 0.02509539121904126 7.300805434928867e-11 10.136629225270031 -0.20686236894265242 TPSKKQT(ph)GVFGVK ddPTM_A549_PD325901_60min_R1 1 TPSKKQTGVFGVK 13 2 I3L379;I3L2C0;B7Z683;A0A0G2JQ41;A0A1C7CYZ0;Q12979-3;Q12979-4;Q12979-2;Q12979 I3L379 ABR Active breakpoint cluster region-related protein 1 T(0.094)PS(0.403)KKQT(0.503)GVFGVK 43.297 0.02544 4747000.0 2217.3 2553.3 3289.9 2790.2 3311.0 3975.6 3386.2 3935.5 3605.3 2881.6 3252.6 True False 2442.398663710011 2768.47555180713 3513.172397775828 2962.5443169960313 3078.4467823299074 3943.22403170598 3515.063693999738 3857.003365159978 3453.7817787684735 2699.6552842230667 2852.5508199301994 0.8562156532481253 0.9705262856192948 1.231589766334748 1.038559697621276 1.0791908634270135 1.3823501422500402 1.2322527856263574 1.3521243296392373 1.2107695872191282 0.946400416553885 1.0 11.478036873895824 -5.58075352566323 4.567443464969904 1.1468697271994586 0.8785542922168997 0.35060740016561753 0.1332421231797187 0.16872480922476463 7.031659376501583 0.01931843709405382 0.08595468906800066 2.6257082839315154e-06 5.58075352566323 -0.26831543498255883 TPSKPPAQLS(ph)PSVPK ddPTM_A549_MK2206_60min_R1 2 TPSKPPAQLSPSVPK 15 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 T(0.001)PSKPPAQLS(0.724)PS(0.275)VPK;TPSKPPAQLS(0.915)PS(0.085)VPK 123.6 8.6448e-08 42417000.0 12152.3 12938.400000000001 13096.0 11266.8 16859.0 13662.2 12350.2 12381.8 19067.5 18983.0 17697.7 True False 14203.311144790285 13596.909295625404 14953.209723076154 14027.166505785874 14379.063432982259 15107.92493576561 14594.07147642182 14136.95806767218 14748.741694540679 14694.727115733916 13302.872658328206 1.0676875220554984 1.0221032437766828 1.124058698232728 1.0544464241717164 1.0808991262485181 1.1356889089896955 1.097061653618496 1.062699646216774 1.1086884820555876 1.1046281125253308 1.0 13.699450198390112 -10.860434872668959 1.027048160261918 0.9983759881948076 1.0851610897343908 0.0 0.043398173117662496 0.3661091679456547 0.664120538993092 0.023718975455200304 0.005338469649120753 1.3790027343985143e-11 10.860434872668959 0.0867851015395833 TPSKPPAQLS(ph)PSVPK ddPTM_A549_PD325901_60min_R1 2 TPSKPPAQLSPSVPK 15 1 F5H8D7;P18887;M0QYS5 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TPSKPPAQLS(0.973)PS(0.027)VPK;T(0.003)PSKPPAQLS(0.846)PS(0.15)VPK 161.08 2.9723e-20 75540000.0 15469.5 13030.099999999999 15515.0 14497.300000000001 17958.8 18062.0 16010.9 16477.3 15325.2 15584.2 16305.3 True False 17039.95225195599 14128.192256139928 16567.941199274133 15392.765295242842 16697.435842496616 17914.90906043701 16620.203561000664 16148.647325308204 14681.135138818569 14600.21095238379 14299.851467812785 1.1916174297551858 0.9879957346368778 1.158609320982567 1.0764283342306087 1.1676649844986502 1.2528038560932802 1.1622640695541984 1.1292877664958152 1.026663470726532 1.021004377929874 1.0 13.803712541394876 -8.776878508254303 3.6781078311299815 1.0113338319582796 1.1404555340974865 0.4363056786465348 0.06350882853405668 0.15026697695810876 4.248759083068999 0.011316722275110115 0.012271943495737694 1.6715581590862078e-09 8.776878508254303 0.12912170213920682 TPSLRS(ph)PDQPPPCPQFMAQGK ddPTM_A549_PD325901_60min_R1 2 TPSLRSPDQPPPCPQFMAQGK 21 1 P49023-3 P49023-3 PXN Paxillin 1 T(0.144)PS(0.166)LRS(0.689)PDQPPPCPQFMAQGK;T(0.191)PS(0.037)LRS(0.772)PDQPPPCPQFMAQGK 86.85600000000001 8.318999999999999e-07 12596900.0 3451.3 3370.7 4253.4 3049.3 4442.4 3630.7 3349.0 3795.8 3286.4 3535.9 4065.0 True False 3801.6734352872254 3654.7607184726803 4542.061301772001 3237.648335537239 4130.381149448014 3601.1327829547477 3476.44802764312 3720.089791252505 3148.2840367638514 3312.6426705595304 3565.0307701581078 1.0663788562808456 1.0251694737295614 1.2740594947433124 0.9081684126371932 1.1585821878515885 1.0101267044029016 0.9751523203512044 1.0434944411679006 0.8831015045135855 0.9292045101794776 1.0 11.799698813438665 -7.7276812251684195 1.1528933038292506 0.9488219820956655 1.0873612380586046 0.2742670529420934 0.09197556568824894 0.4194153372555216 1.1271705543871766 0.015715666671250038 0.02642391124678358 1.872055736661112e-08 7.7276812251684195 0.13853925596293915 TPSNGAEGLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 TPSNGAEGLTPR 12 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 TPSNGAEGLT(1)PR;TPSNGAEGLT(1)PR 124.39 2.9886e-16 29273000.0 6199.5 6348.6 5999.3 5321.5 7122.3 6466.0 6341.3 6936.6 6736.9 6916.4 8333.0 True False 6828.868676169315 6883.618802413642 6406.448574721579 5650.196968996623 6622.054218601114 6413.343039795467 6582.621641592506 6798.244071342573 6453.7715212008225 6479.697323639791 7308.093827239235 0.9344254244131734 0.9419171353214623 0.8766237443261905 0.7731423682515974 0.9061260535433924 0.8775671456065889 0.9007303131573519 0.9302349192622138 0.883099160159367 0.8866467066265916 1.0 12.835279441236107 -10.917529146380517 0.5383056536627628 1.0282713468166083 0.8867003104095476 0.0 0.05494029330306455 1.1690060309506296 0.4121826536457469 0.08712296264258726 0.010197401503002159 1.2091240334623072e-11 10.917529146380517 -0.1415710364070607 TPSNTPSAEADWS(ph)PGLELHPDYK ddPTM_A549_MK2206_60min_R1 2 TPSNTPSAEADWSPGLELHPDYK 23 0 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 TPSNTPSAEADWS(1)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK 122.77 4.2521000000000006e-16 33374000.0 6271.9 6131.5 5216.799999999999 5689.6 11107.9 8423.4 8798.0 8293.5 13466.0 11945.099999999999 11838.7 True False 7330.443386767131 6443.567160246024 5956.620684433697 7083.552255415849 9473.942624546158 9314.758596999614 10396.48271684339 9469.129022778538 10415.972500783262 9246.693613767757 8898.824058501956 0.8237541655589438 0.7240919831525184 0.6693716658823846 0.7960099232042022 1.0646286028651992 1.0467403935355115 1.168298490732668 1.0640876772624481 1.170488643477766 1.0390916319930437 1.0 13.11939898736394 -6.7285398777335 3.7097779348096758 1.0854738657519096 0.7365238208497383 0.877541933595672 0.058786117284596054 0.06525240374831062 1.890531749399029 0.010425793246502696 0.021981849745314624 1.8683581132347423e-07 6.7285398777335 -0.3489500449021713 TPSNTPSAEADWS(ph)PGLELHPDYK ddPTM_A549_PD325901_60min_R1 2 TPSNTPSAEADWSPGLELHPDYK 23 0 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 TPSNTPSAEADWS(1)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK 152.15 2.4724999999999997e-28 45544000.0 11258.2 10470.1 11634.7 11420.0 12075.900000000001 12631.9 9574.7 10675.0 14394.7 14332.8 16102.0 True False 12401.124176151201 11352.452071819147 12424.300707134698 12125.387463298219 11227.730443593387 12529.0299944931 9939.070447976877 10462.078750624509 13789.740817917665 13427.824561949055 14121.556078987905 0.8781698069806477 0.803909428133842 0.8798110234906316 0.8586438630045966 0.7950774249517466 0.8872272945285119 0.7038226093769981 0.7408587759100785 0.9765029250874157 0.9508742865758906 1.0 13.785611450010327 -8.83103379598667 8.088596067374077 0.9893419748090496 0.8191538384485074 0.6024469252980815 0.056658599137713914 0.11105747300323868 11.430522636728071 0.009789252768247513 0.010410096113291026 1.4755917010135804e-09 8.83103379598667 -0.1701881363605422 TPSPKEEDEEPES(ph)PPEK ddPTM_A549_MK2206_60min_R1 2 TPSPKEEDEEPESPPEK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEK;TPSPKEEDEEPES(1)PPEK 213.48 1.2294000000000001e-55 258660000.0 23844.0 28959.0 27042.0 24243.0 38684.0 31473.0 29043.0 31403.0 46748.0 41437.0 40893.0 True False 27868.284270169388 30432.88940611019 30876.96222750655 30182.536088309625 32993.63484438493 34803.45196991341 34319.73716131877 35854.471417654124 36159.652641216104 32076.352920753656 30738.139510615238 0.9066353629029902 0.9900693370072177 1.0045163018680219 0.981924624224126 1.0733777440560697 1.132256295404419 1.1165196627943812 1.1664489779959517 1.1763774000937361 1.0435359273997789 1.0 14.907742225123407 -6.795088737858729 3.326179402225872 1.098228169693996 0.9722623241460188 0.5892565860268848 0.05274370582669523 0.19369503899741075 4.428223100645987 0.010601963562860483 0.021903552655068076 1.60291783868262e-07 6.795088737858729 -0.12596584554797718 TPSPKEEDEEPES(ph)PPEK ddPTM_A549_PD325901_60min_R1 2 TPSPKEEDEEPESPPEK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEK;TPSPKEEDEEPES(1)PPEK 161.2 6.3976e-23 437240000.0 30512.0 31112.0 31751.0 31773.0 35944.0 34527.0 32272.0 34921.0 32808.0 34527.0 35523.0 True False 33609.55577825276 33733.91742757349 33905.8137942735 33735.54604828146 33419.417440068304 34245.82355939035 33500.128619916024 34224.47326000545 31429.19385289328 32346.959327585304 31153.8961988503 1.0788235141995846 1.082815363197442 1.0883330154873134 1.0828676398275485 1.0727203180866223 1.0992468916505589 1.0753110431546058 1.0985615744995794 1.0088367006260084 1.0382957919972473 1.0 14.92712498181169 -8.769652726067488 24.981214414462222 1.0041728770102827 1.0845777455434062 0.8410969676324666 0.01312174829575332 22.360593480971154 68010.38576063074 0.0013312882226091454 0.0014288043844564488 1.6996021583409153e-09 8.769652726067488 0.08040486853312356 TPSPKEEDEEPES(ph)PPEKK ddPTM_A549_MK2206_60min_R1 10 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK 194.68 3.9108999999999994e-49 6640811400.0 125297.8 139341.5 142344.43999999997 122744.62000000001 180426.40000000002 133481.06 130792.45 125739.09 194460.09999999998 190034.0 189794.6 True False 146445.0054029038 146433.3871743328 162531.02200930283 152817.05741021526 153885.9155694069 147605.9371716432 154555.7451601049 143562.9910673131 150415.19783896962 147105.1874156548 142663.3627555184 1.026507454852764 1.026426016785228 1.1392625189119616 1.0711724051542035 1.078664575102723 1.0346450155152649 1.0833597510593271 1.0063059519586426 1.0543365509807552 1.0311350060333873 1.0 17.122255359654538 -10.812605618532098 0.30981440330243787 0.9728642299770828 1.0681200532565434 0.18692856154333348 0.03489913013331091 3.564070891453478 0.41451836254328817 0.12019106809741296 0.01596459556260754 1.5395520681505184e-11 10.812605618532098 0.09525582327946058 TPSPKEEDEEPES(ph)PPEKK ddPTM_A549_PD325901_60min_R1 6 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK 201.29 3.0927999999999997e-49 12092011000.0 91434.40000000001 87423.5 92073.50000000001 95781.9 112861.9 104303.0 103414.09999999999 105185.6 107973.4 106429.5 109292.2 True False 100716.75297755227 94790.98515779982 98322.16139293391 101698.1304265221 104934.8694964179 103453.59094954947 107349.58016586702 103087.5906914929 103435.6534856129 99709.52320662802 95849.95226033805 1.050775202307827 0.9889518244134127 1.025792492059684 1.0610138871045007 1.0947826996450067 1.0793285600034435 1.1199753117695337 1.075510089055618 1.0791414189197646 1.040266800924501 1.0 16.54849009288481 -4.824092104270223 18.859661102823285 1.0493445628002027 4.038590689992391 0.0 0.03858909664313573 35198.417490557025 3326475.725639655 0.006256327817064285 541276.9489033094 1.4993668191856912e-05 4.824092104270223 2.989246127192189 TPSRAS(ph)PTR ddPTM_A549_MK2206_60min_R1 2 TPSRASPTR 9 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 T(0.038)PS(0.011)RAS(0.92)PT(0.031)R;T(0.026)PS(0.004)RAS(0.84)PT(0.131)R 76.52199999999999 0.00055376 50692000.0 2940.8 3405.3 3120.1 3214.2 4320.3 2611.3999999999996 3249.2 2400.6 4569.8 5668.200000000001 5235.3 True False 3437.135144342985 3578.6152247876985 3562.577096592086 4001.6791442909184 3684.7895930668046 2887.7366146929708 3839.5375816739665 2740.892401529168 3534.747596471065 4387.749683264133 3935.2305230705497 0.8734266326184839 0.9093788035561906 0.9053032791106498 1.016885572733493 0.9363592733550122 0.7338163794378559 0.9756830150519578 0.6965011034196104 0.8982313934973754 1.1149917793991126 1.0 11.942232434943644 -10.234613372758712 1.065367460048607 0.9900557431671455 0.8852945421660008 0.27659728583292453 0.09746372218034288 0.5817870499230328 1.3097482418763369 0.03497352084944468 0.016115145459262264 5.826216613107758e-11 10.234613372758712 -0.10476120100114472 TPSRAS(ph)PTR ddPTM_A549_PD325901_60min_R1 2 TPSRASPTR 9 1 Q9UF83 Q9UF83 Uncharacterized protein DKFZp434B061 1 T(0.158)PS(0.043)RAS(0.4)PT(0.4)R;T(0.011)PS(0.112)RAS(0.521)PT(0.356)R 62.14 0.0020396 71839000.0 3842.9 3148.3999999999996 3337.7 3637.0 3904.0 3781.9 4072.9 3914.2999999999997 3600.1 4530.7 4147.8 True False 4233.028379006544 3413.7267173107603 3564.21639322058 3861.6492297736986 3629.7965080688487 3751.10146028495 4227.896438276395 3836.226215791055 3448.800316684988 4244.630828785899 3637.6468950705535 1.1636721488121355 0.9384436741061284 0.9798137356461176 1.0615789110830671 0.9978419051578802 1.0311889989564795 1.162261362972228 1.0545900485804711 0.9480855113668467 1.1668616969222279 1.0 11.828789792617249 -8.752448532781411 24.916532311504124 0.975484824478385 1.0446433707087408 0.0 0.08749912943863035 228.84121423331445 634192.1276549175 0.011176315846005447 0.012584119104893526 1.7682817602343541e-09 8.752448532781411 0.06915854623035578 TPSS(ph)PCPASK ddPTM_A549_MK2206_60min_R1 2 TPSSPCPASK 10 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 T(0.016)PS(0.02)S(0.964)PCPASK;T(0.006)PS(0.205)S(0.788)PCPAS(0.001)K 95.477 0.00055645 90768000.0 8564.3 9833.2 9272.2 9309.8 14494.1 12810.9 11783.7 11687.3 17517.8 17816.5 17917.8 True False 10009.74446296812 10333.66787900696 10587.137385026477 11590.701417932803 12362.037090218175 14166.54093481282 13924.645759316603 13344.010565855126 13550.046270178293 13791.740275903356 13468.31575387724 0.7432068453018358 0.7672576191297058 0.7860773075489166 0.8605902645693534 0.9178606528184052 1.0518420561037543 1.0338817424374682 0.9907705469418974 1.0060683546328 1.0240137317788238 1.0 13.71728182905403 -6.66573405533173 1.5080678696618628 1.0074539754544511 0.7591690050339258 0.9565066069433297 0.023163324097986392 0.05594854900982851 0.2536984457100363 0.0035183243592875227 0.00969516867543593 2.1590661306561133e-07 6.66573405533173 -0.24828497042052533 TPSS(ph)PCPASK ddPTM_A549_PD325901_60min_R1 4 TPSSPCPASK 10 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 T(0.006)PS(0.064)S(0.928)PCPAS(0.003)K;T(0.018)PS(0.227)S(0.754)PCPASK;TPS(0.033)S(0.967)PCPASK;T(0.073)PS(0.045)S(0.881)PCPAS(0.001)K 118.97 6.2102e-05 189264000.0 24781.0 26008.0 25659.0 24863.0 25768.0 24508.0 24429.0 27239.0 21659.0 25275.0 26384.0 True False 27296.74887719201 28199.785435083922 27400.374040101506 26398.731042030096 23958.144574774084 24308.414973601517 25358.658963061716 26695.69677641787 20748.74755120139 23679.132186541527 23138.9352619561 1.1796890638296562 1.218715775632452 1.1841674532514836 1.1408792471723448 1.0354039329616385 1.0505416389477618 1.0959302438066447 1.1537132747983276 0.896702778944002 1.0233457986925436 1.0 14.498034859913743 -7.241053353699146 0.48578995254992896 0.9549868668341668 1.2229563117107456 0.5019539739750325 0.0654447814585827 0.5888398198352374 0.2511212039648336 0.019372824658076628 0.06613802613013701 5.740459355098739e-08 7.241053353699146 0.2679694448765788 TPSS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 TPSSPSK 7 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.004)PS(0.31)S(0.651)PS(0.035)K 98.58200000000001 0.011496 34336000.0 10730.0 7981.8 6319.2 4138.8 6053.3 5951.4 5558.4 5061.8 4966.5 12746.0 11741.0 True False 12540.961676686693 8388.039526975734 7215.357581098265 5152.806185797795 5162.867588758021 6581.173197780405 6568.2893309050105 5779.325651112363 3841.595679870791 9866.669747518552 8825.385664884785 1.4210100445338911 0.950444529619912 0.8175685295892914 0.583861870909532 0.5850019234060773 0.7457094168661831 0.7442495524064737 0.654852475638277 0.4352892695846786 1.117987374396217 1.0 13.107443609466236 -5.254784227509153 1.6002805557521547 0.7063908261311879 1.6931601697916017 0.5351007083562985 0.1835128703328043 0.6495577428841036 1.5226504099161509 0.028878847394823895 1.0001908575945717 5.5618051831806235e-06 5.254784227509153 0.9867693436604138 TPSS(ph)PSKSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_A549_MK2206_60min_R1 1 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.046)PS(0.056)S(0.879)PS(0.018)KSPASFEIPASAMEANGVDGDGLNKPAK 173.23 3.760199999999999e-63 65173000.0 3807.3 3339.8 3865.1 3847.7 4679.3 3673.6 4172.2 3540.1 5347.4 5854.3 5909.4 True False 4449.879160451937 3509.781554560819 4413.2292990731285 4790.3866727298155 3990.981168631227 4062.337913661678 4930.234734168446 4041.9200161015624 4136.222438043101 4531.80956401207 4441.932888857007 1.0017889220287106 0.7901473620561503 0.9935380406453497 1.0784464314503572 0.8984784931449474 0.9145428387386092 1.1099300366595788 0.9099462142350432 0.9311762562687949 1.0202336859659737 1.0 12.116971880688675 TPSS(ph)PSKSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_A549_PD325901_60min_R1 3 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.119)PS(0.119)S(0.681)PS(0.024)KS(0.029)PAS(0.029)FEIPASAMEANGVDGDGLNKPAK;T(0.171)PS(0.171)S(0.622)PS(0.016)KS(0.009)PAS(0.012)FEIPASAMEANGVDGDGLNKPAK;T(0.138)PS(0.138)S(0.713)PS(0.004)KS(0.007)PAS(0.001)FEIPASAMEANGVDGDGLNKPAK 133.77 6.345399999999999e-30 160532000.0 5111.9 4486.6 5003.299999999999 5290.8 6557.2 4906.2 5238.2 5668.2 6096.4 6256.7 5514.1 True False 5630.856324818114 4864.701527724067 5342.854025287031 5617.600699721381 6096.644893111952 4866.245533845426 5437.542567453024 5555.143304383122 5840.1895088020765 5861.6508942249 4835.900656759859 1.1643862693802502 1.0059556374310437 1.1048312205955941 1.1616451822410419 1.2607051562545568 1.0062749173813463 1.1244115529652499 1.1487298227720768 1.2076735903659173 1.2121115197085774 1.0 12.239568892468311 -11.01931735765893 1.3209408780749132 1.0003640990064273 1.1371647959239501 0.0 0.09507982216376383 0.4325153023129582 1.3500461211408052 0.052309480441947054 0.011957707058940507 9.564948639151994e-12 11.01931735765893 0.13680069691752283 TPSS(ph)PSKSPASFEIPASAMEANGVDGDGLNKPAKK ddPTM_A549_MK2206_60min_R1 1 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKK 35 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.116)PS(0.116)S(0.421)PS(0.116)KS(0.116)PAS(0.116)FEIPAS(0.001)AMEANGVDGDGLNKPAKK 40.295 0.018639 3683800.0 305.27 406.95 617.08 461.45 482.96 493.53 227.9 389.36 549.12 841.4 728.99 True False 356.79211286506484 427.6620167760124 704.5912229624192 574.5052707152778 411.9172237732436 545.7550170213 269.30648001461793 444.5529723649907 424.7451967644517 651.3271556223208 547.9616638995279 0.6511260483552456 0.7804597382462632 1.2858403596124752 1.048440627446187 0.7517263540698553 0.9959729904049773 0.49146956394379604 0.8112848063153961 0.7751367016111756 1.1886363563961757 1.0 9.097931153696516 -5.52522391454359 24.999693203138374 0.8914815910867485 0.6834593290334956 0.123041833999458 0.21142479349023788 98.2878487413007 1047780.1992523344 0.027014433978087476 0.10599542938279581 2.98384380523688e-06 5.52522391454359 -0.20802226205325292 TPSS(ph)PSKSPASFEIPASAMEANGVDGDGLNKPAKK ddPTM_A549_PD325901_60min_R1 4 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKK 35 3 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.204)PS(0.204)S(0.539)PS(0.05)KS(0.002)PASFEIPASAMEANGVDGDGLNKPAKK;T(0.124)PS(0.124)S(0.588)PS(0.154)KS(0.011)PASFEIPASAMEANGVDGDGLNKPAKK;T(0.108)PS(0.108)S(0.485)PS(0.294)KS(0.004)PASFEIPASAMEANGVDGDGLNKPAKK;T(0.16)PS(0.16)S(0.556)PS(0.092)KS(0.026)PAS(0.007)FEIPASAMEANGVDGDGLNKPAKK 230.9 2.1453999999999997e-116 163218600.0 8056.490000000001 8793.72 9165.82 8795.7 10815.5 11387.1 10917.0 11057.4 12216.900000000001 10913.6 11312.400000000001 True False 8874.378933925533 9534.797645963028 9787.867663753197 9338.990412515945 10055.856591449436 11294.367232980974 11332.452409011628 10836.851482637501 11703.46617841416 10224.513433473374 9921.046515211949 0.894500284855881 0.96106772923031 0.9865761287123744 0.9413311789433164 1.0135882919237182 1.1384249852738129 1.1422638117496546 1.0923093109201079 1.1796604481663528 1.0305881962952315 1.0 13.276276595059866 -7.015742231243015 3.821901827756682 1.0954152186382535 0.9508839275192433 0.6528681692139735 0.05162054062025757 0.1494201642689753 4.813288776623123 0.01029372748736175 0.019221632826880525 9.644012592029431e-08 7.015742231243015 -0.1445312911190102 TPSS(ph)SQPER ddPTM_A549_MK2206_60min_R1 2 TPSSSQPER 9 0 O43395;O43395-3 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 T(0.023)PS(0.023)S(0.477)S(0.477)QPER;T(0.006)PS(0.006)S(0.494)S(0.494)QPER 58.699 0.010844 107547000.0 4662.0 4859.3 4601.5 3938.0 6112.0 4609.0 4212.3 4116.4 5998.4 6915.0 6311.299999999999 True False 5448.831625043188 5106.617614251569 5254.061892236942 4902.810176783535 5212.932896517438 5096.721320793407 4977.620385105639 4699.912305946293 4639.77197747648 5352.896697323925 4744.030026981291 1.1485660069715822 1.0764302892705337 1.1075102523286924 1.0334694656018606 1.0988406200781404 1.0743442372426426 1.0492388026205193 0.990700370616526 0.9780233158492144 1.1283437640317944 1.0 12.211897426004668 -8.034781806840648 2.015806860104063 0.9889862823001805 1.0890163791930416 0.1709740418558986 0.04959758837623773 0.11292374871639711 0.9149669973836716 0.004256151129936318 0.005897989588186659 9.230350511665046e-09 8.034781806840648 0.10003009689286113 TPSS(ph)SQPER ddPTM_A549_PD325901_60min_R1 2 TPSSSQPER 9 0 O43395;O43395-3 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 T(0.011)PS(0.011)S(0.489)S(0.489)QPER;T(0.018)PS(0.018)S(0.482)S(0.482)QPER 64.374 0.0063030000000000004 113727000.0 8205.5 9155.8 8419.9 8318.7 9181.7 8164.299999999999 8670.7 8476.2 8763.900000000001 8768.8 8538.0 True False 9038.51631943017 9927.391398282898 8991.325046971851 8832.527205861548 8536.809067145428 8097.812647665036 9000.6682332891 8307.13554154974 8395.583760283203 8215.13647150723 7487.880126841308 1.2070861400452177 1.3257946481670875 1.2007837858863744 1.1795764697407711 1.1400835647120062 1.0814559675758353 1.202031560444591 1.109410861396098 1.1212230455169963 1.0971244641135447 1.0 12.870341623723913 -2.0000000004638356 0.04759538630184173 0.6463450807055489 2.095082053646519 0.5832815541889564 0.05254198135442654 148.02377805706575 0.5184084354937587 3.804574512499307 15.917831428717749 0.00999999998931979 2.0000000004638356 1.44873697294097 TPSSEEIS(ph)PTKFPGLYR ddPTM_A549_MK2206_60min_R1 2 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.02)PS(0.017)S(0.016)EEIS(0.917)PT(0.029)KFPGLYR;TPSS(0.001)EEIS(0.995)PT(0.003)KFPGLYR 93.26899999999999 1.1893e-06 15898300.0 3595.6 4064.2 3347.1000000000004 3273.6 5856.5 4430.6 3416.8999999999996 3493.0 5692.200000000001 5590.6 5017.0 True False 4202.449376020009 4271.050420398252 3821.769109965505 4075.6321469574864 4995.016608058637 4899.443151205746 4037.706500930006 3988.1434468638577 4402.925788575559 4327.679577159674 3771.1404378440466 1.1143709562888995 1.1325620169266364 1.01342529480297 1.080742606681473 1.3245374152425566 1.299194032139187 1.0706857958433271 1.0575430728705164 1.1675316422563946 1.1475784708865948 1.0 11.880785162325042 -10.883231922838599 0.7454230653921768 0.9826857914551362 1.143133781408025 0.0 0.1012851940868296 1.1495868243018532 0.9216370525630619 0.11857909079599073 0.018685384102676245 1.3084829776004703e-11 10.883231922838599 0.16044798995288867 TPSSEEIS(ph)PTKFPGLYR ddPTM_A549_PD325901_60min_R1 1 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 TPSSEEIS(0.98)PT(0.02)KFPGLYR 134.29 8.0875e-13 12264000.0 3400.0 2868.4 3257.9 3530.8 4276.2 4212.8 3591.4 3925.4 4014.8 4523.3 4055.7 True False 3745.1654970522904 3110.130134650677 3479.000685344195 3748.889496971396 3975.8544640891423 4178.492353549388 3728.072692289487 3847.1048175832743 3846.071917843083 4237.698066048791 3556.874611200549 1.0529371727805124 0.874399711717956 0.9781060806554355 1.0539841593420793 1.1177943837461213 1.1747651548894564 1.0481316042319393 1.0815969743405613 1.081306579020766 1.1914105863345135 1.0 11.796394401320027 -6.2172416610189405 4.39328696206419 1.0593211227948305 0.9564152491740299 0.3095881515862321 0.07071776691749176 0.19582747891289903 8.492800777531304 0.008982895614961454 0.024354880783994552 6.063988080701225e-07 6.2172416610189405 -0.10290587362080061 TPSSPLQSCTPS(ph)LSPR ddPTM_A549_PD325901_60min_R1 1 TPSSPLQSCTPSLSPR 16 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 TPSSPLQS(0.032)CT(0.025)PS(0.471)LS(0.471)PR 48.216 0.048387 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TPSSPS(ph)KSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_A549_PD325901_60min_R1 1 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;Q4VXL4;H0Y911;O95359-2;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.066)PS(0.066)S(0.07)PS(0.266)KS(0.266)PAS(0.266)FEIPAS(0.001)AMEANGVDGDGLNKPAK 47.795 0.0031927 29239000.0 1356.0 1460.4 1362.7 1441.7 1559.6 1451.2 1455.1 1803.2 2292.0 1629.7 1500.2 True False 1493.6601217655602 1583.4730332742452 1455.1810165807835 1530.750534661738 1450.0590763279135 1439.3819083438273 1510.4746267612727 1767.2337614169646 2195.6752106447025 1526.8004638736575 1315.6849105513395 1.1352719103084035 1.2035351477966625 1.10602546621211 1.1634628643877012 1.1021324822523535 1.094017189678532 1.148051949709073 1.3432044004186405 1.6688457798946723 1.160460572002646 1.0 10.361598308375488 -8.245295580920283 8.607178061932025 1.3267413280439866 1.1355049431205102 0.18253502403805066 0.1540302379083051 0.3811067766362477 177.44413713009217 0.038242461645799766 0.04868421933267017 5.684659011346893e-09 8.245295580920283 -0.1912363849234764 TPST(ph)PVACSTPAQLK ddPTM_A549_MK2206_60min_R1 2 TPSTPVACSTPAQLK 15 0 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 T(0.002)PS(0.018)T(0.98)PVACSTPAQLK;T(0.038)PS(0.038)T(0.922)PVACS(0.001)TPAQLK 112.15 2.0228e-06 5207100.0 1893.1599999999999 2425.6 2744.2 1734.23 2622.2 2669.8 2427.0 2563.5 3228.5 3393.6 2872.9 True False 2212.679124681845 2549.0526794247326 3133.3688242261455 2159.1164278525425 2236.4778536073345 2952.3164639301885 2867.9544844031484 2926.8839753894963 2497.2499048551 2626.9834030424386 2159.479641993654 1.0246353249429465 1.1804013475539974 1.450983266197123 0.9998318047857233 1.0356559099314293 1.3671425312463608 1.3280766480185122 1.3553653938072632 1.1564128025534952 1.2164890800346608 1.0 11.076468000589639 -9.852807124825107 1.054521700823296 1.0243545376242333 1.216337344873843 0.009976175844370605 0.15623226145725294 0.5011114183070463 1.136668051306779 0.04778323077479437 0.028669246464954678 1.4034368486265243e-10 9.852807124825107 0.1919828072496097 TPSTPVACST(ph)PAQLKR ddPTM_A549_PD325901_60min_R1 1 TPSTPVACSTPAQLKR 16 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 TPSTPVACS(0.052)T(0.947)PAQLKR 69.737 0.00098908 6802000.0 2782.9 3187.6 2914.6 3371.3 3281.0 2962.0 2822.6 3213.8 3241.5 3037.9 3586.2 True False 3065.4179593372983 3456.2302388831713 3112.402282913594 3579.5375442221803 3050.5538788355266 2937.878454047969 2930.015587585987 3149.698237822675 3105.2710276198964 2846.0864755487432 3145.1201347948345 0.9746584638927519 1.098918353116782 0.9895972648169209 1.138124265786014 0.9699323867113658 0.9341069110670444 0.9316068900424118 1.0014556210356458 0.9873298616691671 0.9049213872825249 1.0 11.618899409735674 TPSVAKS(ph)PEAK ddPTM_A549_PD325901_60min_R1 1 TPSVAKSPEAK 11 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2 Q9UI08-4 EVL Ena/VASP-like protein 1 T(0.122)PS(0.034)VAKS(0.844)PEAK 42.568000000000005 0.021379 44257000.0 2294.9 2517.4 2992.1 2546.6 3077.6 3415.6 3150.7 3467.3 3157.6 3623.9 3581.6 True False 2527.8765585839114 2729.550132816068 3195.1618989589524 2703.897698251771 2861.439993143616 3387.7844860385712 3270.601612629194 3398.1419814557703 3024.897052849784 3395.086335541356 3141.085905633033 0.8047779126481613 0.8689829615678637 1.0172157002229525 0.8608162207225104 0.9109715808829307 1.0785392656606825 1.041232780919457 1.0818366907322556 0.9630099728966716 1.0808638915137005 1.0 11.617047684492457 -7.094487607632343 8.026527337051151 1.001224056709859 0.8946091390103332 0.5206448575388636 0.0652186574871986 0.23969432613238956 18.343921287125536 0.009363671232545456 0.016266529090773186 8.044747034927969e-08 7.094487607632343 -0.10661491769952569 TPT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 TPTSPK 6 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 T(0.012)PT(0.932)S(0.057)PK 69.19800000000001 0.055554 308800000.0 2892.7 3036.0 2874.3 1737.4 3593.2 2441.1 2523.9 3188.8 3066.2 4281.3 4575.6 True False 3380.9170402750783 3190.519432195536 3281.9189605251836 2163.06307799485 3064.6450398832567 2699.4155817289634 2982.459960109234 3640.8221652904313 2371.7105957152557 3314.151356508013 3439.3522398643063 0.9830098240849174 0.9276512580524211 0.9542258924473133 0.6289158327325584 0.8910529733948295 0.7848616231978217 0.8671574622513517 1.0585778691379613 0.6895806042270411 0.963597539703804 1.0 11.747921161120654 -5.8822760181091995 0.005619587126181411 1.6972341477071917 6.34199434510716e-07 0.0 0.1290507663199985 91465.35295343754 91.78319894887363 13376.21582725828 14356.189327016822 1.3113661885339844e-06 5.8822760181091995 -1.6972335135077572 TPT(ph)SPLK ddPTM_A549_MK2206_60min_R1 2 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.016)PT(0.884)S(0.1)PLK;T(0.066)PT(0.467)S(0.467)PLK 88.37 0.013556 1037900000.0 16861.2 17854.8 17499.8 16814.4 23528.0 16495.0 17125.0 15507.5 23740.0 23996.2 25543.0 True False 19706.958343238566 18763.533055983142 19981.534782520474 20933.928754827102 20067.062367353145 18240.489951505162 20236.390830409535 17705.735614726975 18362.92790498995 18575.441753915304 19199.96814906329 1.0264057830845938 0.9772689678601659 1.0407066630209652 1.090310598033383 1.045161232120698 0.9500270943103133 1.0539804375350907 0.9221752597329588 0.9564040816331157 0.9674725296261257 1.0 14.228816297202831 -7.249112388885522 24.688601864791444 0.978541198657154 1.0359914452285777 0.36700751459481973 0.03971649958773626 608.6490360993735 1219007.1968759242 0.00598548545563908 0.01031841355108757 5.634918137424194e-08 7.249112388885522 0.05745024657142361 TPT(ph)SPLK ddPTM_A549_PD325901_60min_R1 2 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.029)PT(0.754)S(0.217)PLK;T(0.012)PT(0.494)S(0.494)PLK 68.625 0.02398 9154400.0 5531.2 5413.299999999999 5403.0 6009.7 5440.5 6311.3 5815.1 6427.2 6498.1 6084.2 6770.3 True False 6092.72335214577 5869.497788978003 5769.680070878389 6380.90551998102 5058.378048706087 6259.902865304845 6036.396812644815 6299.004453959137 6225.007454751458 5700.042573663932 5937.596020467758 1.0261262859822842 0.9885310096451476 0.9717198763589612 1.0746614451345478 0.8519235783756796 1.0542823802303236 1.0166398643216004 1.0608678044524336 1.0484053534954132 0.9599916454428788 1.0 12.535663223878515 TPTGEGLLDS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 TPTGEGLLDSPSK 13 0 O95425-4;O95425;A0A6I8PIX7;A0A0J9YWY6;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 TPTGEGLLDS(0.988)PS(0.012)K;TPTGEGLLDS(0.918)PS(0.082)K 188.12 2.2449000000000003e-25 29110000.0 17735.2 20038.4 17988.5 16603.6 26409.4 20885.7 19960.9 19578.3 29094.7 29094.0 27402.3 True False 20728.468175990118 21058.26896907345 20539.539791047315 20671.482745363915 22524.612244320633 23095.810911194378 23587.537151925335 22353.58398102913 22504.79690468876 22521.645193339442 20597.55264499382 1.0063558779653425 1.0223675274446553 0.9971835074318597 1.0035892662416894 1.0935576974867052 1.1212890827011797 1.1451621247662267 1.0852543681427176 1.0925956735038855 1.0934136487721646 1.0 14.330185309351997 -6.744925258067484 24.76804995766925 1.0645041828679724 1.0077170904121258 0.428330098662026 0.039468135124464086 277.57916296313533 416313.2871841658 0.007569057106345713 0.01572184332853111 1.7991805268422756e-07 6.744925258067484 -0.05678709245584668 TPTGEGLLDS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 TPTGEGLLDSPSK 13 0 O95425-4;O95425;A0A6I8PIX7;A0A0J9YWY6;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 TPTGEGLLDS(1)PSK 238.01 1.7484999999999999e-56 25018000.0 12962.0 13287.0 13217.0 12529.0 16375.0 12929.0 12663.0 13318.0 14558.0 14332.0 15217.0 True False 14277.892697879939 14406.742120730556 14113.985100277554 13302.88787457648 15224.87649068324 12823.710510596291 13144.897394459489 13052.362042231123 13946.177886808715 13427.075074085575 13345.405468510688 1.0698732782281897 1.0795282432387805 1.0575913286097134 0.9968140650327537 1.14083281520425 0.9609082722030913 0.9849754977827905 0.9780416243649532 1.0450171723680923 1.0061196795981653 1.0 13.704055518564218 -7.279451626393814 24.999796555128288 1.011356302288665 1.0648807221534795 0.44394735880300584 0.0385353044934313 776.4433977435207 1077649.1737937657 0.005948525249797117 0.00952063381114364 5.254705410423499e-08 7.279451626393814 0.0535244198648146 TPTHQPPKPGS(ph)PGRPACPLSNLLLQSYEER ddPTM_A549_MK2206_60min_R1 1 TPTHQPPKPGSPGRPACPLSNLLLQSYEER 30 2 Q96F63 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 T(0.003)PT(0.004)HQPPKPGS(0.974)PGRPACPLS(0.011)NLLLQS(0.008)YEER 44.641000000000005 0.006587600000000001 2367400.0 1123.0 1291.4 1220.8 1030.3 1586.6 1210.1 1088.0 960.01 1801.5 1345.5 1583.1 True False 1312.5349452860357 1357.1267439846224 1393.927797032024 1282.7235462519252 1353.2132417563112 1338.1519788006306 1285.6755166998869 1096.0943574073212 1393.4631264043553 1041.5506155096657 1189.9725786627291 1.1029959587480915 1.1404689219895623 1.1713948892826558 1.0779437856403615 1.1371801888721076 1.1245233737271685 1.0804244902388482 0.9211089205426005 1.1710044007655247 0.8752727871092143 1.0 10.216712613587656 -7.7965871692251305 5.279642063177529 1.0680109873332047 1.1269999789148317 0.20005965830798045 0.0848871197820665 0.3233343735224141 22.28176625305982 0.011948440980472333 0.016886705791873038 1.5973968760713597e-08 7.7965871692251305 0.05898899158162707 TPTHQPPKPGS(ph)PGRPACPLSNLLLQSYEER ddPTM_A549_PD325901_60min_R1 4 TPTHQPPKPGSPGRPACPLSNLLLQSYEER 30 2 Q96F63 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 T(0.004)PT(0.004)HQPPKPGS(0.99)PGRPACPLS(0.001)NLLLQSYEER;T(0.007)PT(0.007)HQPPKPGS(0.986)PGRPACPLSNLLLQSYEER;T(0.033)PT(0.033)HQPPKPGS(0.904)PGRPACPLS(0.029)NLLLQSYEER;TPTHQPPKPGS(1)PGRPACPLSNLLLQSYEER 108.71 2.575e-15 55289700.0 5302.5 5699.24 6678.6 5760.700000000001 7083.9 7197.8 6937.0 7215.5 5978.1 6048.849999999999 6871.4 True False 5840.805896505813 6179.534956284516 7131.849957684322 6116.525355501054 6586.351302128304 7139.183503222982 7200.99133107205 7071.581192049754 5726.861246402743 5666.924578696803 6026.261361393463 0.9692254527698136 1.0254342760294106 1.1834617733929835 1.0149784399803594 1.092941528278709 1.1846787046043712 1.1949351180160153 1.173460752524444 0.9503174361290083 0.9403715237114161 1.0 12.557047529218988 -8.772468773887526 24.99783423531188 0.97653878095367 1.1071259343606241 0.4141201869089174 0.07439505332419474 164.38211232216563 372566.4795707762 0.01337318298219554 0.014303355207396597 1.6886172680225558e-09 8.772468773887526 0.13058715340695415 TPTPSTPGDTQPNT(ph)PAPVPPAEDGIK ddPTM_A549_MK2206_60min_R1 1 TPTPSTPGDTQPNTPAPVPPAEDGIK 26 0 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8Y4X2;A0A2R8YE38;A0A2R8Y7M9 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 T(0.001)PT(0.001)PS(0.001)T(0.001)PGDT(0.019)QPNT(0.975)PAPVPPAEDGIK 50.908 0.0074642 3558500.0 1663.6 2323.1 2032.9 1733.5 2612.1 2036.6 1782.0 1976.7 3290.3 2911.5 3618.5 True False 1944.3750088849945 2441.3358672376303 2321.195788488204 2158.207577819772 2227.8635502279476 2252.111660214333 2105.766333418382 2256.9032783898624 2545.0523035294186 2253.7901278754316 2719.9265844805045 0.7148630481349417 0.8975741776147668 0.8534038388141066 0.7934800851369234 0.8190895897484163 0.8280045766913512 0.7741996954747128 0.8297662485698754 0.9357062495918483 0.8286216770464402 1.0 11.4093519958306 -8.886381101103918 2.004802738011945 0.9760809116905793 0.8149166002827188 0.2856813266335865 0.06299649796119187 0.11671654377569712 0.9231210798406787 0.008545325427038045 0.008842232321336371 1.299029156631689e-09 8.886381101103918 -0.16116431140786047 TPTS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TPTSPK 6 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 T(0.019)PT(0.133)S(0.848)PK;T(0.101)PT(0.067)S(0.832)PK 75.21300000000001 0.045926 420830000.0 23623.9 22194.9 19011.6 18999.3 20668.6 18366.7 14728.7 18314.0 19677.7 23304.1 25402.0 True False 26022.180937004 24065.34211600832 20301.841502038038 20172.843610458993 19216.908838799118 18217.12768465997 15289.208738353887 17948.712902944935 18850.714700045035 21832.67514889741 22277.715036545196 1.168081236981272 1.080242838034809 0.9113071726042882 0.9055167272481359 0.8626068161512517 0.8177287327167939 0.6863005794477979 0.8056801549665752 0.8461691277189612 0.9800230909266177 1.0 14.443313646585752 -5.656692272521923 2.2545900794494744 0.8862329859777331 1.1692861801791836 0.5889999516178008 0.08293994794751118 0.2318102356306914 2.1281957414950017 0.014253557954748912 0.09369094536861348 2.204487940943635e-06 5.656692272521923 0.2830531942014505 TPTS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.01)PT(0.208)S(0.782)PLK;T(0.007)PT(0.099)S(0.894)PLK 93.93799999999999 0.012086 950616000.0 13342.9 15282.6 14493.5 12377.2 17617.4 14174.5 13702.4 14298.7 18512.9 18242.9 20309.1 True False 15594.855317415007 16060.419062737641 16548.896237126177 15409.614555633618 15025.903797628662 15674.436181728395 16191.948713261509 16325.584512932239 14319.757709026462 14121.816219755698 15265.789967354702 1.021555736765932 1.0520529299225407 1.084051088906329 1.0094213655884483 0.9842860297279716 1.0267687564972117 1.060668903993004 1.069422843353922 0.9380292627927351 0.9250629184571943 1.0 13.898014626971424 -8.760743501142402 24.99999918214868 0.9707360405773802 1.0380644015437026 0.5511641380967844 0.03293187213876908 12.84265321233328 461383.7425335228 0.006080821618432821 0.006697145729564951 1.7348283029592138e-09 8.760743501142402 0.06732836096632244 TPTS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.019)PT(0.145)S(0.836)PLK 93.26700000000001 0.012171 1469000000.0 14632.0 15789.0 16308.0 16228.0 18383.0 17619.0 16306.0 17673.0 17560.0 16601.0 18727.0 True False 16117.429868490903 17119.59444150032 17414.758947970513 17230.366703537966 17091.841497907175 17475.516705560833 16926.533752985568 17320.49815079971 16822.01426654491 15552.810026855617 16423.69772023391 0.9813520769220144 1.0423715008106287 1.0603433675301768 1.0491161611133553 1.0406816899004487 1.0640427632829046 1.0306164933936994 1.0546040511608386 1.0242525497665653 0.9469737139459548 1.0 14.00349135940934 -9.50373564454588 0.9283513075269384 1.004350070089872 1.0418644056478654 0.37645519135108907 0.02755600508431229 0.3862159976296141 0.7032637973878941 0.006234430109541255 0.0043634231386781444 3.135193538828701e-10 9.50373564454588 0.03751433555799344 TPTS(ph)SPASSPLVAK ddPTM_A549_MK2206_60min_R1 1 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 T(0.016)PT(0.131)S(0.426)S(0.426)PASSPLVAK 176.87 5.8602e-23 57169000.0 2309.5 2731.9 3431.1 2948.1 4623.7 3273.8 3448.5 3711.7 5632.5 5413.4 5624.0 True False 2699.287138146126 2870.942041111656 3917.681573064034 3670.3846323452394 3943.5598549783513 3620.2313430274407 4075.0478118929777 4237.844841604518 4356.747743254247 4190.509180230419 4227.405585496294 0.6385209754670917 0.6791262354767906 0.9267342567046595 0.868235743676423 0.9328558084202323 0.8563718975647869 0.9639595088472142 1.0024694238338614 1.0305961079773631 0.9912720924170458 1.0 12.04555681863328 -4.421363346375016 0.3875151268990176 1.01533916511389 6.025531988654284e-18 0.8373951070003567 0.05039892028257555 2.5221782689295686 0.15711750644869985 0.012266723132817252 1.3674431302580181 3.7899776913771764e-05 4.421363346375016 -1.01533916511389 TPTSS(ph)PASS(ph)PLVAK ddPTM_A549_PD325901_60min_R1 2 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 2 T(0.317)PT(0.006)S(0.059)S(0.618)PAS(0.046)S(0.954)PLVAK;T(0.155)PT(0.003)S(0.034)S(0.809)PAS(0.047)S(0.953)PLVAK 119.32 3.0583e-06 64504000.0 34960.0 35243.0 40284.0 34440.0 36220.0 36330.0 32901.0 34825.0 31702.0 32029.0 35871.0 True False 38509.11346380825 38213.051295319274 43017.914487370916 36567.28058108501 33676.0321522166 36034.140525173105 34153.06555911803 34130.38805531599 30369.675186674656 30006.68347389667 31459.094405004056 1.224101144427183 1.2146901243680077 1.367423802273477 1.1623754997622697 1.070470488395874 1.1454284112972215 1.0856340973911016 1.0849132405377513 0.965370293108116 0.9538317628470464 1.0 14.941189520862038 -7.3169475957434065 0.5855365712971047 0.9821817655513753 1.2734965700083432 0.7523232565562745 0.058896967894694036 0.30780907468950425 0.20043848109498297 0.013374781843547064 0.03923320951084204 4.820059554902007e-08 7.3169475957434065 0.2913148044569679 TPTSS(ph)PASSPLVAK ddPTM_A549_MK2206_60min_R1 1 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 TPT(0.001)S(0.012)S(0.952)PAS(0.034)SPLVAK 220.32 2.546e-39 63706000.0 3277.4 4907.8 4156.4 4253.6 7048.6 5334.2 4593.1 4439.5 7591.5 7146.9 7419.9 True False 3830.544995263092 5157.586057091319 4745.840019318399 5295.732190951359 6011.760277223957 5898.661503444607 5427.606815950602 5068.812720398541 5872.037371134424 5532.410326262378 5577.334051177805 0.6868057319346272 0.9247403884660907 0.8509155047501926 0.9495095940744346 1.0778913764282079 1.0576130906483796 0.9731543361302549 0.9088235837923541 1.0528394600811806 0.991945304960541 1.0 12.445359967608498 -4.432470202230858 0.6468850737165377 1.018090879143204 1.2944089835589147e-12 0.7014354570098909 0.05817240204997366 3.101589205444056 0.4124068352534402 0.009790445414917798 3.001641887466635 3.694279906447382e-05 4.432470202230858 -1.0180908791419097 TPTSS(ph)PASSPLVAK ddPTM_A549_PD325901_60min_R1 4 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 T(0.001)PT(0.002)S(0.149)S(0.848)PAS(0.001)SPLVAK;T(0.002)PT(0.005)S(0.068)S(0.925)PASSPLVAK;TPTS(0.071)S(0.928)PAS(0.001)SPLVAK;TPTS(0.01)S(0.988)PAS(0.001)SPLVAK 202.15 1.5707e-31 221103500.0 21971.9 23047.2 22325.8 22541.8 26570.3 25042.6 23516.7 24347.2 25631.3 24283.899999999998 28204.0 True False 24202.47111314211 24989.468428155444 23840.963043941647 23934.155789857767 24704.093790558847 24838.66136844757 24411.640887332018 23861.57599599109 24554.10559624674 22750.610409683693 24735.08679988665 0.978467199607847 1.0102842423932776 0.9638520065371633 0.9676196402095281 0.9987470022006172 1.0041873541580375 0.9869235990489383 0.9646853552218154 0.9926832193837 0.9197707933569067 1.0 14.594271341732313 -8.983848334100287 17.607378012502117 0.9967724947832366 0.9847901079876216 0.0 0.027539457496706842 6.504273897676202 7092.054820125252 0.002664300714948572 0.0027080608244343064 1.037890808542145e-09 8.983848334100287 -0.01198238679561503 TPTTPLPQTPT(ph)RR ddPTM_A549_PD325901_60min_R1 2 TPTTPLPQTPTRR 13 1 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 T(0.002)PTTPLPQT(0.333)PT(0.664)RR;T(0.002)PT(0.002)T(0.001)PLPQT(0.358)PT(0.636)RR 68.944 0.0022081 7997900.0 2952.6000000000004 3664.6000000000004 2184.3 2585.8999999999996 3160.7 3018.0 2620.8 2831.1 2536.7 2506.7 3470.6000000000004 True False 3252.3457784107604 3973.4287029148213 2332.539733262939 2745.6251699949958 2938.7033358230537 2993.4224086147096 2720.535978156789 2774.631489545016 2430.091320611874 2348.4265342039025 3043.738201946057 1.0685366357498576 1.3054436483316316 0.766340459823909 0.9020569404555036 0.9654914913326489 0.9834690797982635 0.8938140528700451 0.9115867743720587 0.7983903868795814 0.7715599629108716 1.0 11.571628559733238 -5.758955019463893 24.999963139784203 0.9049286942317759 1.1869901555670364 0.6007750218583664 0.09315581366538919 32.40335622377087 326051.33521526825 0.012834101288888997 0.045455401537269756 1.7419872843055094e-06 5.758955019463893 0.28206146133526044 TPTVPDS(ph)PGYMGPTR ddPTM_A549_MK2206_60min_R1 4 TPTVPDSPGYMGPTR 15 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 TPT(0.003)VPDS(0.994)PGYMGPT(0.002)R;T(0.05)PT(0.01)VPDS(0.828)PGY(0.064)MGPT(0.048)R;TPTVPDS(1)PGYMGPTR;TPTVPDS(1)PGYMGPTR 187.16 1.9595e-33 31499200.0 10732.8 12734.3 9317.199999999999 9793.0 14160.5 9378.6 8634.5 10132.6 15002.600000000002 12751.7 14098.5 True False 12544.234248233262 13382.421477406977 10638.51906168641 12192.285439624478 12077.509208300919 10371.037226989165 10203.276883221663 11568.92707978607 11604.535054229247 9871.082113559727 10597.453351194796 1.1837027097476187 1.262795978799774 1.0038750546127182 1.1504920130882081 1.1396614646988992 0.9786348553088838 0.9628046045676915 1.0916704887860391 1.0950305389097004 0.9314579443227108 1.0 13.371429995374111 -5.619280603206431 0.6805722979421477 1.0417196169764769 1.2870183205897978 0.40875649012268656 0.07715361783803946 1.5562097300865707 0.653519666559183 0.012042260397078081 0.2662129364810267 2.4028098122783788e-06 5.619280603206431 0.24529870361332096 TPTVPDS(ph)PGYMGPTR ddPTM_A549_PD325901_60min_R1 1 TPTVPDSPGYMGPTR 15 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 T(0.105)PT(0.143)VPDS(0.752)PGYMGPTR 93.71600000000001 2.8508e-07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TPVDES(ph)DDEIQHDEIPTGK ddPTM_A549_MK2206_60min_R1 2 TPVDESDDEIQHDEIPTGK 19 0 A0A087WX60;Q86TC9-2;Q86TC9 A0A087WX60 MYPN Myopalladin 1 TPVDES(1)DDEIQHDEIPTGK;TPVDES(1)DDEIQHDEIPTGK 159.98 3.8741999999999995e-27 19959000.0 5182.200000000001 6127.2 5760.3 5696.700000000001 8368.6 5990.9 5092.2 5811.1 10153.6 9128.7 9844.400000000001 True False 6056.828667374258 6439.048308612804 6577.197156981946 7092.39175573458 7137.590025817386 6624.853061562433 6017.386825495555 6634.841220747371 7853.825811967392 7066.520329842507 7399.763788381892 0.8185164879024748 0.8701694395600205 0.8888387987882224 0.9584619129153953 0.9645699822234683 0.8952789914677928 0.8131863391292627 0.8966287857950954 1.0613616916121575 0.9549656626793144 1.0 12.853263503137578 -8.751148176829457 24.227838453368097 1.0289763524166102 0.8902485573080073 0.4929837598856608 0.051432220960309326 69.11111837153808 162702.9844779984 0.008753880880069004 0.009869327636599251 1.7735842488647659e-09 8.751148176829457 -0.1387277951086029 TPVEPEVAIHR ddPTM_A549_MK2206_60min_R1 2 TPVEPEVAIHR 11 0 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 0 ; 120.06 1.3685e-05 11268300.0 1238.75 1229.97 1245.0 1379.1799999999998 1473.75 1252.25 1035.34 1285.58 1935.73 1593.63 1750.85 False True 1447.8207154702382 1292.5702193733669 1421.559720924696 1717.079161913743 1256.9633272648207 1384.762263823724 1223.4478763419672 1467.814901923631 1497.2902457256182 1233.6278761758974 1316.0656239982554 1.100112858408767 0.9821472393196407 1.0801586904199698 1.3047063388048947 0.9550916795821475 1.0521984911487663 0.9296252816216626 1.1153052516213862 1.1377018124497438 0.9373604580811791 1.0 10.362015713747681 TPVEPEVAIHR ddPTM_A549_PD325901_60min_R1 2 TPVEPEVAIHR 11 0 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 0 ; 154.24 4.4143e-13 31061000.0 1778.9 1416.4299999999998 1526.13 1716.81 1853.82 2034.51 1846.83 1774.07 1725.63 1829.2 2035.4099999999999 False True 1959.4926184430342 1535.797527061517 1629.70235916521 1822.8534545415948 1723.6140785318114 2017.9416250996408 1917.1121262741538 1738.6847821190079 1653.1077721399724 1713.7039998267744 1785.067473527064 1.0977134744219659 0.8603582496671559 0.9129640102315727 1.021167816665143 0.9655736290607387 1.1304567782597301 1.0739717992206683 0.9740162811233068 0.9260757907787339 0.9600219740941867 1.0 10.801762892184318 -4.893194261672954 9.189104088780267 0.9775765639192071 2.2487396365117887 0.17423024243046414 0.07141431698103212 14494.474086921206 46182.50808177802 0.010247133543190986 339931.8635852434 1.2788091597121452e-05 4.893194261672954 1.2711630725925815 TPVKEPNSENVDIS(ph)SGGGVTGWK ddPTM_A549_MK2206_60min_R1 1 TPVKEPNSENVDISSGGGVTGWK 23 1 P61026 P61026 RAB10 Ras-related protein Rab-10 1 TPVKEPNSENVDIS(0.551)S(0.378)GGGVT(0.071)GWK 90.55 2.7864999999999997e-07 2820200.0 1032.7 1126.2 917.65 1020.5 1365.8 1159.9 1233.1 1312.4 1825.9 1308.0 1490.4 True False 1206.9945129090722 1183.5187696108737 1047.786568599636 1270.5225458119855 1164.8926292643189 1282.6398481206938 1457.1383084950658 1498.4367190564353 1412.3365653631479 1012.5218915545476 1120.2925470525745 1.077392254446935 1.056437242865396 0.9352794244291837 1.13409890046547 1.0398111032061086 1.1449150951644245 1.3006766065959408 1.3375405584895985 1.2606854960152367 0.9038013278035587 1.0 10.12965980361502 -6.418867103588297 7.094292047181223 1.1504476446046954 1.0263253361525628 0.14185876504933403 0.12695699401458416 0.3928046521671362 23.517158920663967 0.018798192294692654 0.04386671511876016 3.8118244939722417e-07 6.418867103588297 -0.12412230845213257 TPVKEPNSENVDIS(ph)SGGGVTGWK ddPTM_A549_PD325901_60min_R1 1 TPVKEPNSENVDISSGGGVTGWK 23 1 P61026 P61026 RAB10 Ras-related protein Rab-10 1 TPVKEPNSENVDIS(0.499)S(0.499)GGGVT(0.002)GWK 80.439 1.6984000000000002e-05 3900500.0 2401.9 2754.9 2331.7 2864.8 2185.7 2694.2 2138.2 2727.9 3234.3 2934.8 3149.3 True False 2645.7391198146747 2987.0650913223926 2489.943183651144 3041.7521895671416 2032.183972255655 2672.259328459164 2219.570371067934 2673.489894503848 3098.373618581221 2749.496227143898 2761.9560650575463 0.9579222324666304 1.08150347831842 0.9015144068192356 1.1013036116140267 0.7357770813104204 0.9675241986166375 0.8036226206305308 0.9679697401153791 1.1218040930410909 0.9954887631735776 1.0 11.431474655225562 -8.587236571492342 7.597864019518396 1.057181217280807 0.9360407987086153 0.15188668815630713 0.10446522586124328 0.26405681683791976 26.798546762403436 0.017397458078081605 0.019738421420898745 2.5868034322320116e-09 8.587236571492342 -0.12114041857219171 TPVKEPNSENVDISS(ph)GGGVTGWK ddPTM_A549_MK2206_60min_R1 1 TPVKEPNSENVDISSGGGVTGWK 23 1 P61026 P61026 RAB10 Ras-related protein Rab-10 1 TPVKEPNSENVDIS(0.141)S(0.639)GGGVT(0.22)GWK 85.0 5.0592e-06 2767400.0 1481.6 1274.2 1095.4 1223.4 1753.2 1388.8 1271.9 1347.7 2137.4 1808.9 2208.7 True False 1731.657858357783 1339.0513374517632 1250.7441914063545 1523.1330549205131 1495.3066024499963 1535.7618941891706 1502.9877662597307 1538.7406021581526 1653.282312726432 1400.2682336643884 1660.2188329810942 1.0430298849510173 0.8065511069088154 0.7533610428695802 0.9174290910708263 0.9006683774120421 0.9250358227966561 0.9052949746154615 0.9268299886679306 0.9958219241241789 0.8434238943971394 1.0 10.697157699998696 -8.273469019956163 0.7919085239675296 1.0019837665461937 0.8730655467020276 0.0 0.08368495999261075 0.4401173828922664 0.5533028625179846 0.014940709364159737 0.020083582007106648 5.327592269138857e-09 8.273469019956163 -0.12891821984416607 TPVKLESIDGNEEESMKENSGPVENGVS(ph)DQEGEEQAR ddPTM_A549_MK2206_60min_R1 4 TPVKLESIDGNEEESMKENSGPVENGVSDQEGEEQAR 37 2 Q8TEQ6 Q8TEQ6 GEMIN5 Gem-associated protein 5 1 TPVKLESIDGNEEESMKENS(0.01)GPVENGVS(0.99)DQEGEEQAR;TPVKLESIDGNEEESMKENSGPVENGVS(1)DQEGEEQAR;TPVKLESIDGNEEESMKENSGPVENGVS(1)DQEGEEQAR;TPVKLESIDGNEEESMKENSGPVENGVS(1)DQEGEEQAR 181.84 4.2078e-81 105806000.0 4709.549999999999 4586.6 4727.87 4331.82 7375.9 5972.1 5074.5 5397.599999999999 7405.0 6571.700000000001 6558.4 True False 5504.406902557302 4820.038349047443 5398.353058448388 5393.116094462792 6290.914880795644 6604.063658040864 5996.470964608069 6162.726329456734 5727.779323355122 5087.148405756131 4929.768277368225 1.1165650377173202 0.9777413618354975 1.0950520906289571 1.093989776197336 1.276107623491397 1.3396296309420992 1.2163798838450286 1.2501046667343008 1.1618759749115262 1.031924447465495 1.0 12.267304119308161 -4.110633121568711 16.145239437006197 1.1214641664401883 1.1325194385569102 0.0 0.11425841747270474 0.0 0.0 0.01715143485914569 0.0 7.751163153904793e-05 4.110633121568711 0.01105527211672186 TPVKLESIDGNEEESMKENSGPVENGVS(ph)DQEGEEQAR ddPTM_A549_PD325901_60min_R1 6 TPVKLESIDGNEEESMKENSGPVENGVSDQEGEEQAR 37 2 Q8TEQ6 Q8TEQ6 GEMIN5 Gem-associated protein 5 1 TPVKLESIDGNEEESMKENSGPVENGVS(1)DQEGEEQAR;TPVKLESIDGNEEESMKENSGPVENGVS(1)DQEGEEQAR;TPVKLESIDGNEEES(0.004)MKENS(0.016)GPVENGVS(0.98)DQEGEEQAR;TPVKLESIDGNEEESMKENSGPVENGVS(1)DQEGEEQAR;TPVKLESIDGNEEES(0.034)MKENS(0.223)GPVENGVS(0.742)DQEGEEQAR;TPVKLESIDGNEEESMKENSGPVENGVS(1)DQEGEEQAR 262.91 6.505399999999997e-181 209169000.0 11927.68 13838.02 12473.779999999999 12745.06 14517.099999999999 13190.2 14706.8 14630.37 14738.149999999998 15048.3 14330.5 True False 13138.56929290607 15004.198509935415 13320.325721732623 13532.293410068607 13497.468977276187 13082.78338439687 15266.475321869748 14338.555793046773 14118.756808797214 14098.147769841056 12567.939348524169 1.045403620160604 1.193847145013262 1.0598655318381056 1.0767312790746146 1.073960384672064 1.0409648727285716 1.2147158653866723 1.1408835924029601 1.1233947282260839 1.1217549177221784 1.0 13.617460503025375 -10.681053690706845 0.971677684382633 1.0007592218951984 1.109089290295856 0.0 0.06504160854715661 0.4835297213174558 0.820849576802006 0.0355093133277856 0.009643232588148382 2.0842331987936196e-11 10.681053690706845 0.10833006840065762 TPVQYSQQQNS(ph)PQK ddPTM_A549_MK2206_60min_R1 4 TPVQYSQQQNSPQK 14 0 P46013 P46013 MKI67 Antigen KI-67 1 TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK 264.57 1.7863999999999998e-83 275468000.0 11503.7 12694.0 11445.02 10299.2 14589.899999999998 11912.199999999999 12346.1 11797.0 16828.8 15967.599999999999 16953.3 True False 13445.243321537819 13340.070379542209 13068.09593347596 12822.504462348656 12443.74503712366 13172.741097321601 14589.22655949309 13469.260876797298 13017.103670071383 12360.508070020178 12743.327722723036 1.055081028604732 1.0468278513904263 1.025485353419407 1.006213191824647 0.9764910161523053 1.0336971145953395 1.1448521827998328 1.0569657447308545 1.021483866169444 0.9699592083769266 1.0 13.637454443813716 -9.120717569411342 2.565512880269577 1.007918543685978 1.0420605382892376 0.18921296827064682 0.04105402554620008 0.43298005757215813 5.910342887586514 0.008311041082540773 0.008021605416646373 7.573252390132017e-10 9.120717569411342 0.03414199460325951 TPVQYSQQQNS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 TPVQYSQQQNSPQK 14 0 P46013 P46013 MKI67 Antigen KI-67 1 TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK 343.87 5.488099999999998e-203 448280000.0 26628.0 25047.0 26998.0 22221.0 31480.0 22768.0 27388.0 26407.0 25456.0 28966.0 28228.0 True False 29331.254957502457 27157.798592454128 28830.24663216264 23593.540702447433 29268.953400104332 22582.58495670634 28430.265327288656 25880.29166910925 24386.17284562456 27137.081816631526 24756.1349520352 1.1848075240473326 1.0970128675203996 1.1645697798958115 0.953038135725133 1.1822909132145498 0.9122015613689255 1.1484129240033654 1.045409217523337 0.9850557404406043 1.0961760335048014 1.0 14.595498471129424 -2.000000000001784 0.22346976307071326 0.9850570709112135 2.016762845568913 0.15158418013344233 0.0849650146541073 35.624866560366605 0.41625193990612736 0.04271309181075121 13.515320760038692 0.009999999999958924 2.000000000001784 1.0317057746576994 TPVQYSQQQNS(ph)PQKHK ddPTM_A549_MK2206_60min_R1 6 TPVQYSQQQNSPQKHK 16 1 P46013 P46013 MKI67 Antigen KI-67 1 TPVQYSQQQNS(1)PQKHK;TPVQYSQQQNS(1)PQKHK;TPVQYSQQQNS(1)PQKHK;TPVQYS(0.07)QQQNS(0.93)PQKHK;TPVQYSQQQNS(1)PQKHK;TPVQYS(0.008)QQQNS(0.992)PQKHK 147.16 7.5068e-15 246937400.0 5595.88 7374.82 6736.710000000001 5818.61 8734.080000000002 6085.119999999999 5540.929999999999 4993.4 9827.87 10373.54 11599.24 True False 6540.327737869295 7750.166837596926 7692.076777149084 7244.16971120733 7449.308401965814 6729.043359424255 6547.645258040351 5701.229741646151 7601.873136883468 8030.150109263581 8718.828585261748 0.750138355618669 0.888900012405079 0.8822374131946716 0.8308650227913447 0.8543932627094053 0.7717829630002115 0.7509776335216004 0.6538985926714367 0.8718915692107567 0.9210124996421761 1.0 13.089918599967286 -9.690327088266455 1.1657934392839082 0.9749206743835347 0.8065420236646087 0.4175644678777204 0.07000743254718998 0.2569002988855863 0.7148034927284204 0.020848618844067048 0.014301215436618955 2.0402007915884487e-10 9.690327088266455 -0.168378650718926 TPVQYSQQQNS(ph)PQKHK ddPTM_A549_PD325901_60min_R1 6 TPVQYSQQQNSPQKHK 16 1 P46013 P46013 MKI67 Antigen KI-67 1 TPVQYSQQQNS(1)PQKHK;TPVQYSQQQNS(1)PQKHK;TPVQYSQQQNS(1)PQKHK;TPVQYSQQQNS(1)PQKHK;TPVQYS(0.001)QQQNS(0.999)PQKHK;TPVQYSQQQNS(1)PQKHK 168.79 2.8356e-28 385417000.0 8812.81 8649.169999999998 10013.55 10224.52 10152.1 13771.39 13301.57 13745.570000000002 11917.98 11626.75 12624.1 True False 9707.479983552179 9378.065910164754 10693.129719367811 10856.065378830295 9439.051518843684 13659.240365729798 13807.768525248392 13471.403823158937 11417.108746491855 10892.635020766436 11071.415730763343 0.8768056605966575 0.8470520968792274 0.9658321916008974 0.9805489779112286 0.8525604808259591 1.2337392703785708 1.2471547326040466 1.2167733694370197 1.0312239215051748 0.9838520461750757 1.0 13.434552094637127 -7.2298573887038655 24.96889748803442 1.0649783752944555 0.9089906325878919 0.4878451052136079 0.10138200920866562 666.5897720646618 527009.9195883927 0.017356047978240138 0.030060027601164264 5.890370484325784e-08 7.2298573887038655 -0.15598774270656357 TPVS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 TPVSPVK 7 0 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.443)PVS(0.557)PVK 58.955 0.031486 209540000.0 31486.0 30864.0 30336.0 30283.0 35881.0 28551.0 29460.0 30223.0 29143.0 30858.0 35436.0 True False 34682.43554123186 33465.01759721742 32394.783385187235 32153.512132316984 33360.84234273009 28318.490122053892 30581.116421130573 29620.178555515173 27918.22105751246 28909.620613740783 31077.596647311864 1.1159947770360101 1.0768212863111493 1.0423838031242774 1.034620292463902 1.0734691849350493 0.9112187935067808 0.984024497395482 0.9531038996246592 0.8983391275183217 0.9302399069601605 1.0 14.923587318331386 -7.2513387171298485 24.782090621020593 0.9510890471679737 1.0657607518326213 0.7650809718495664 0.033722649467980856 311.7372497470168 764850.7755897279 0.00632111412039747 0.010864144383844154 5.606105712755753e-08 7.2513387171298485 0.1146717046646476 TPVS(ph)PVKFSPGDFWGR ddPTM_A549_MK2206_60min_R1 1 TPVSPVKFSPGDFWGR 16 1 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.033)PVS(0.965)PVKFS(0.002)PGDFWGR 101.17 3.4619e-07 28831000.0 6155.9 6169.8 4720.7 3631.7 8351.4 7119.0 5041.9 5868.8 9534.4 7936.6 8002.9 True False 7194.865422694838 6483.8164666535 5390.166244633903 4521.466663033209 7122.920123032681 7872.327854790252 5957.947966589301 6700.720372446213 7374.873623308181 6143.716547791911 6015.559061196357 1.1960426868893452 1.0778410453115919 0.8960374571672682 0.7516286710904627 1.1840828176685037 1.308661052897156 0.990422985790518 1.1138981937139512 1.2259664560323487 1.0213043351900972 1.0 12.554483106408483 TPVS(ph)PVKFSPGDFWGR ddPTM_A549_PD325901_60min_R1 1 TPVSPVKFSPGDFWGR 16 1 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.273)PVS(0.52)PVKFS(0.207)PGDFWGR 59.537 0.0013922000000000001 54764000.0 5461.7 5184.0 5746.7 5045.3 5278.0 5506.2 5646.6 5610.3 6274.1 5373.4 6453.5 True False 6016.167763308965 5620.87387324958 6136.705619714385 5356.936722292337 4907.291488111523 5461.359332774795 5861.484452938079 5498.398165304795 6010.4213957704715 5034.122606969818 5659.760412107097 1.0629721622914385 0.9931292959372746 1.0842695048693278 0.9464953164506799 0.8670493326208778 0.964945321906579 1.0356417986173871 0.9714895622689039 1.0619568600312579 0.8894586060924162 1.0 12.466525267121915 -8.747633937620204 24.98978796489204 1.0292574087185364 0.9889835820643152 0.0 0.07120645131035261 462.6793520449622 837513.5843689842 0.010415802051666265 0.011781606450659414 1.787994021764052e-09 8.747633937620204 -0.04027382665422119 TPVSGSLKS(ph)PVPR ddPTM_A549_MK2206_60min_R1 6 TPVSGSLKSPVPR 13 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 TPVSGSLKS(1)PVPR;TPVSGS(0.002)LKS(0.998)PVPR;TPVSGS(0.001)LKS(0.999)PVPR;T(0.001)PVS(0.018)GS(0.018)LKS(0.962)PVPR;TPVSGS(0.002)LKS(0.998)PVPR;T(0.006)PVS(0.004)GS(0.014)LKS(0.976)PVPR 101.9 3.8539e-05 300848600.0 19873.100000000002 22636.899999999998 21941.7 20374.9 29148.9 21609.7 20154.0 20483.9 31232.3 30062.1 30501.3 True False 23227.193429353443 23789.021519982576 25053.362994870215 25366.75141466401 24861.135423314343 23896.424110642092 23815.720922398476 23387.555554312803 24158.233917734517 23271.05073096479 22926.985416944928 1.0130940900841956 1.0375991909691071 1.092745624392194 1.1064146006703477 1.0843612874172248 1.0422837401458227 1.0387637314409726 1.020088560662994 1.0537030262984157 1.0150070019133683 1.0 14.484759052395049 -7.583983350999502 2.5820390435878617 1.0261964821859264 1.0685701363415556 0.3413805124845005 0.02717430252319402 0.289138009578073 3.911728568376807 0.005004089701725784 0.007885435602869178 2.6062534607397887e-08 7.583983350999502 0.042373654155629215 TPVSGSLKS(ph)PVPR ddPTM_A549_PD325901_60min_R1 4 TPVSGSLKSPVPR 13 1 A0A0C4DG98;Q8NI27;Q8NI27-2;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 TPVSGS(0.003)LKS(0.997)PVPR;TPVSGS(0.005)LKS(0.995)PVPR;T(0.002)PVS(0.005)GS(0.018)LKS(0.975)PVPR;TPVS(0.001)GS(0.006)LKS(0.993)PVPR 85.988 7.1814e-05 460729500.0 11581.300000000001 11439.4 12704.500000000002 12138.9 13769.599999999999 13028.5 12233.699999999999 13646.199999999999 13260.900000000001 13994.899999999998 13260.0 True False 12757.025050297561 12403.438384577792 13566.703768364692 12888.692283557857 12802.47079854118 12922.400215585405 12699.260148037514 13374.01583576319 12703.590489021952 13111.259625615414 11629.104062065555 1.096991219806117 1.0665858967620847 1.1666164216914732 1.1083134362518186 1.100899151836054 1.1112120199989108 1.0920239495889315 1.1500469653023042 1.0923963205782465 1.1274522573398142 1.0 13.505452331476224 -10.252201471196692 0.6787098432105229 0.9987780892091006 1.111470326717334 0.0 0.045345530344781504 0.30354171087283455 0.2589051753085855 0.017788715493699685 0.005595266744576445 5.594979876060413e-11 10.252201471196692 0.11269223750823343 TQAPPTPDKVQMT(ph)WTR ddPTM_A549_MK2206_60min_R1 2 TQAPPTPDKVQMTWTR 16 1 A0A0G2JNW7;Q9Y666;A0A0G2JQE3;H0YB78;A0A0U1RR18 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 TQAPPTPDKVQMT(0.979)WT(0.021)R;TQAPPTPDKVQMT(1)WTR 140.17 6.9366e-12 41876000.0 7648.7 7138.7 5932.299999999999 5581.1 11692.900000000001 9293.3 7200.9 7132.2 12345.099999999999 12189.0 13729.6 True False 8939.613567238917 7502.029338146996 6773.589343326566 6948.469750545104 9972.88989949097 10276.710837606717 8509.210320040638 8143.211191446438 9548.954561073773 9435.496434371851 10320.161402316846 0.8662280771337549 0.7269294583380075 0.6563452914414609 0.6732908023110175 0.966350186853869 0.9957897398096531 0.824522988383723 0.7890585111990894 0.9252718236490043 0.9142779910645206 1.0 13.33317791353748 -7.6405040290211055 0.2596495555277391 1.015491539613956 0.6845139999259853 0.2957948338230644 0.09979911034665624 1.9309590356769255 0.305569326417625 0.09384386666718705 0.21678848466621303 2.2882104833727657e-08 7.6405040290211055 -0.33097753968797083 TQAPPTPDKVQMT(ph)WTR ddPTM_A549_PD325901_60min_R1 3 TQAPPTPDKVQMTWTR 16 1 A0A0G2JNW7;Q9Y666;A0A0G2JQE3;H0YB78;A0A0U1RR18 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 TQAPPTPDKVQMT(0.993)WT(0.007)R;TQAPPTPDKVQMT(1)WTR;TQAPPT(0.003)PDKVQMT(0.963)WT(0.034)R 156.87 1.2065e-20 38835000.0 11139.599999999999 10998.0 11527.2 10529.9 10831.7 12270.6 9732.1 11138.300000000001 14566.6 12654.6 14580.900000000001 True False 12270.483991459902 11924.84005748436 12309.505110684684 11180.308007861984 10070.918759336404 12170.67230190446 10102.460391109464 10916.137868672693 13954.41645871602 11855.586396352448 12787.541735940547 0.9595655087461097 0.9325357683070948 0.9626170037113312 0.8743125331461256 0.7875570588388519 0.9517601235034627 0.7900236495585059 0.8536541341634019 1.0912509023916508 0.9271200549071325 1.0 13.642451328191505 -8.758301330416943 24.99935763228022 1.0430907068237567 0.8878294418482578 0.3177978703852711 0.07098120468402477 46.115892904457034 367383.08042964025 0.011424128532148267 0.012689101554884558 1.744611253685818e-09 8.758301330416943 -0.15526126497549886 TQAPTKAS(ph)E ddPTM_A549_MK2206_60min_R1 2 TQAPTKASE 9 1 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 1 TQAPT(0.058)KAS(0.942)E;TQAPT(0.075)KAS(0.925)E 100.93 0.00062681 190014000.0 11247.9 12636.5 12169.0 10084.8 14869.5 10709.7 11050.7 12252.1 15774.7 16216.5 16465.0 True False 13146.270535247366 13279.643875144566 13894.747183881627 12555.57645272388 12682.216247507542 11842.993345476494 13058.469147422291 13988.87269548259 12201.75563701958 12553.181387151611 12376.286089117446 1.062214499615274 1.0729910232780937 1.122691175998216 1.0144866046498462 1.0247190599980638 0.9569101150538303 1.0551201752603871 1.1302964875531685 0.9858979946939549 1.0142930841094333 1.0 13.595290831043455 -5.253231093154918 0.20851120050080127 0.9860217437460732 1.1672263837747912 0.11798001905818378 0.04886420354479335 13.974570026987827 0.5132433703684741 0.04841513447372282 0.6658035771560306 5.581731052874081e-06 5.253231093154918 0.18120464002871794 TQAPTKAS(ph)E ddPTM_A549_PD325901_60min_R1 4 TQAPTKASE 9 1 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 1 TQAPT(0.013)KAS(0.987)E;TQAPT(0.017)KAS(0.983)E;TQAPT(0.075)KAS(0.925)E;TQAPT(0.064)KAS(0.936)E 103.46 0.00053992 318668000.0 33321.8 33980.2 34737.0 35947.0 38718.8 36770.1 35595.4 37883.6 34455.8 37334.600000000006 41540.1 True False 36704.60460578735 36843.83070752226 37094.461710550175 38167.36454843969 35999.32506060863 36470.656496687814 36950.00242555025 37127.98187889072 33007.74254927214 34977.28698443731 36430.93104438985 1.0075121209793962 1.011333766425824 1.0182133875566297 1.0476637147135783 0.9881527599924547 1.0010904319807132 1.014248095403544 1.019133489442022 0.9060362061308103 0.9600986299751351 1.0 15.152876245230201 -8.72688203375912 24.995541300022044 0.9556281932376848 1.013424872735312 0.5304102997764918 0.02432144391621664 142.77463756868954 103269.72097135356 0.005936597304726328 0.006731320766287835 1.8755038769537667e-09 8.72688203375912 0.057796679497627124 TQASSS(ph)FQDSSQPAGK ddPTM_A549_MK2206_60min_R1 1 TQASSSFQDSSQPAGK 16 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 TQASS(0.202)S(0.797)FQDSSQPAGK 137.19 1.5306e-10 3625800.0 921.63 905.99 679.79 580.65 1159.4 842.75 698.64 737.54 1107.2 1284.5 1100.0 True False 1077.178612309857 952.1010212038317 776.1944439256222 722.9092760663694 988.8537958478936 931.9292456278249 825.5738446573616 842.0885536215201 856.4209678350826 994.3305578760061 826.8396415444391 1.3027660481998833 1.1514941632762297 0.938748464546018 0.8743040847872993 1.1959438640373254 1.1270979266149972 0.9984691144165353 1.0184424056502634 1.0357763764632633 1.202567593419582 1.0 9.691463747972767 -5.486921392522595 3.7039981614368007 1.0220722301561334 1.288450328742804 0.3685706336855328 0.09772386940359268 0.13628997753157854 3.7101868791454073 0.011117915891941553 0.0708807885344971 3.2589568291478687e-06 5.486921392522595 0.2663780985866706 TQDPS(ph)SPGTT(ph)PPQAR ddPTM_A549_MK2206_60min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 2 T(0.058)QDPS(0.899)S(0.043)PGT(0.022)T(0.978)PPQAR 128.28 4.9668e-09 14532000.0 887.58 1335.0 1135.0 1163.1 1569.0 980.61 836.72 1062.6 1036.2 1212.7 1507.2 True False 1037.38180475243 1402.945797753966 1295.9600668670928 1448.0595522135425 1338.2021784417325 1084.3774993237637 988.7411933208907 1213.2268040760202 801.5023544713811 938.750227743272 1132.9206433961624 0.9156703170688681 1.2383442793913153 1.143910718214284 1.2781650335831876 1.1811967468702809 0.9571522115380644 0.8727364966684126 1.0708841887099203 0.7074655750545008 0.8286107532908707 1.0 10.145831094286166 -7.3930136516854015 3.3488934890713797 0.8787742533339811 1.1631120620643836 0.49890145540207187 0.1225009266171937 0.17121248742830011 3.581658349179019 0.021470920331020864 0.03528910544091319 4.0456317439105765e-08 7.3930136516854015 0.2843378087304025 TQDPS(ph)SPGTT(ph)PPQAR ddPTM_A549_PD325901_60min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 2 T(0.008)QDPS(0.514)S(0.478)PGT(0.168)T(0.832)PPQAR 156.98 2.6729e-19 18272000.0 1442.5 1451.5 1382.4 1473.9 1784.1 1402.2 1385.4 2007.7 1833.9 1283.1 1463.7 True False 1588.9415380876267 1573.8229990396921 1476.217977046508 1564.9394555302308 1658.7909708108687 1390.7809480979286 1438.122155119968 1967.6548484898192 1756.8275605590395 1202.0848470247847 1283.6741791587751 1.237807509012062 1.2260299572832873 1.1499942906181315 1.2191095536063334 1.2922211864524042 1.0834376593983865 1.1203171166552612 1.532830433482174 1.3685930503878594 0.9364407779959725 1.0 10.326063350236096 -10.960311236537825 1.2764447792796851 1.002493949588372 1.2563016470463284 0.43558438988787695 0.12028448003372556 0.3979586980335651 1.171020296550727 0.0854752447531856 0.020688623519954104 1.0956926880656583e-11 10.960311236537825 0.2538076974579564 TQDPS(ph)SPGTTPPQAR ddPTM_A549_MK2206_60min_R1 2 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.731)S(0.268)PGTTPPQAR;TQDPS(0.882)S(0.116)PGT(0.001)TPPQAR 167.56 4.295399999999999e-27 83361100.0 2732.81 3109.41 2492.63 2647.5200000000004 3349.01 2846.42 2417.41 2138.2799999999997 3624.78 3993.6000000000004 4200.7 True False 3194.0415172102676 3267.6656876360757 2846.122415396407 3296.1625188516914 2856.375065406722 3147.626275099322 2856.62210553812 2441.3877382078604 2803.773117584224 3091.4429863243445 3157.550256577934 1.0115568265481487 1.0348736907128382 0.9013704245774876 1.0438986717582706 0.9046174512840163 0.9968570630165148 0.904695689193574 0.7731904609029943 0.8879583505419408 0.9790637472465016 1.0 11.624589981252507 -6.865389284644663 1.380338394286493 0.9295828802460772 0.9955168375164816 0.18023812463415478 0.07062216562241015 0.7353457006123745 2.796565306803065 0.012174176457288325 0.030507239451897938 1.3633605254894282e-07 6.865389284644663 0.06593395727040441 TQDPSS(ph)PGT(ph)TPPQAR ddPTM_A549_MK2206_60min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 2 TQDPS(0.16)S(0.84)PGT(0.84)T(0.16)PPQAR 134.88 2.2953e-09 12737000.0 710.31 765.44 953.35 552.29 1054.1 861.55 664.43 669.8 934.81 909.48 1276.6 True False 830.1929625878222 804.3976265414195 1088.5493654165132 687.6010747932405 899.0432863578259 952.7186491493948 785.1483304787741 764.7462011764708 723.0770275848207 704.0278363387079 959.5849876323923 0.8651583479189037 0.8382765850955314 1.1343959935245733 0.7165608921100106 0.9369084530762174 0.992844470712345 0.8182165629914553 0.7969551535641964 0.7535309919435969 0.7336795025063627 1.0 9.906266777129169 -7.790140499149541 24.992050573967912 0.8683188398374877 0.9126626828901556 0.07254335208998097 0.12010430050959854 784.6746542374204 683267.306054795 0.02020344666021698 0.02791764447633807 1.6212855084112176e-08 7.790140499149541 0.04434384305266792 TQDPSS(ph)PGTT(ph)PPQAR ddPTM_A549_PD325901_60min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 2 T(0.004)QDPS(0.17)S(0.826)PGT(0.069)T(0.931)PPQAR 146.33 1.7743e-13 17101000.0 1475.1 1477.6 1440.7 1435.5 1450.7 1655.5 1302.8 1499.0 1446.2 1664.0 1604.9 True False 1624.8510660887744 1602.1225376376506 1538.4745656328885 1524.1675747429585 1348.8078366433078 1642.0181568792761 1352.3787669195144 1469.1012690572488 1385.421243295972 1558.934756019984 1407.5074742993227 1.1544173624354275 1.1382692929820568 1.093048949099729 1.082884178289505 0.9582953279269537 1.1666141650130109 0.960832387474708 1.0437609006578017 0.9843082673402176 1.107585419250469 1.0 10.4589268681441 -5.0054174103072375 0.3341996007012643 0.9896576753937104 1.3304826862543566 0.2427466306568079 0.0642562684363267 4.199490223162045 0.2837991815307372 0.015413297429318087 0.5974817197768255 9.876034302321339e-06 5.0054174103072375 0.3408250108606462 TQDPSS(ph)PGTTPPQAR ddPTM_A549_MK2206_60min_R1 2 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.072)S(0.878)PGT(0.038)T(0.011)PPQAR;TQDPS(0.093)S(0.893)PGT(0.012)T(0.002)PPQAR 115.83 9.882700000000002e-07 79664500.0 2097.23 2466.75 2519.5 1915.01 2753.87 2139.52 2016.79 1965.94 2743.1000000000004 3282.7 3742.0 True False 2451.19115164936 2592.297038658874 2876.8029854375686 2384.1875359680653 2348.7793710295305 2365.9225863015668 2383.214637247394 2244.6180154387457 2121.7922298305784 2541.1357900658363 2812.7581260539014 0.8714546511996771 0.9216210290700259 1.0227694158237195 0.8476333296787627 0.8350449152642571 0.8411397213242744 0.8472874418785784 0.7980131653153498 0.7543457825886015 0.9034320322561358 1.0 11.45776978280153 -6.325973585754694 24.996684588401127 0.8644118600045586 0.9369173345723241 0.22820221364298776 0.06762111639119792 355.45394049746966 137680.8302839773 0.013592094792520307 0.031585177978543606 4.720917535053843e-07 6.325973585754694 0.07250547456776546 TQDPSS(ph)PGTTPPQAR ddPTM_A549_PD325901_60min_R1 4 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.086)S(0.913)PGTTPPQAR;TQDPS(0.066)S(0.934)PGTTPPQAR;TQDPS(0.141)S(0.817)PGT(0.041)T(0.002)PPQAR;TQDPS(0.085)S(0.914)PGTTPPQAR 188.92 1.4795e-33 200374000.0 10157.2 10145.2 9308.4 8934.800000000001 10941.6 9897.4 10806.699999999999 9563.900000000001 12134.9 10892.900000000001 11920.7 True False 11188.35146666457 11000.171608582494 9940.12399995639 9486.682303596926 10173.099762470825 9816.79885587251 11217.954882153144 9373.1405117656 11624.912353251473 10205.120435006058 10454.52947154336 1.0701917764083628 1.0521919363778487 0.9507959231463116 0.9074231728380643 0.9730805953688715 0.9389995869822055 1.0730234117841253 0.8965626370157318 1.1119498380959019 0.9761434469895389 1.0 13.351840511362466 -8.77560008107423 24.999976099419708 1.0528651921693304 0.982744045844486 0.05917854063954242 0.06668826180995069 297.04822093285077 524420.9155863841 0.01188018989424657 0.012677020548214214 1.676485953106942e-09 8.77560008107423 -0.07012114632484434 TQDPSSPGT(ph)TPPQAR ddPTM_A549_MK2206_60min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 T(0.002)QDPS(0.041)S(0.041)PGT(0.458)T(0.458)PPQAR 51.092 0.023438 2916500.0 351.0 315.82 443.58 440.41 482.32 380.09 646.33 282.52 565.55 565.35 582.23 True False 410.24021887390785 331.8938890237133 506.48631406247114 548.3104697707558 411.3713669254407 420.3108715166774 763.7597947689687 322.5680751812131 437.4538279977699 437.63704234737264 437.64622226947154 0.9373786359826294 0.7583611422546601 1.157296209335523 1.2528623391912774 0.9399632534064178 0.960389579823403 1.7451534045201915 0.7370521182805927 0.999560388592631 0.9999790243314536 1.0 8.773621307058193 -3.6478837973102056 14.515615682241883 1.0295409344157902 0.5306453318313762 0.0 0.26308115256801523 0.0 0.0 0.03177089305137533 0.0 0.00022496564582019903 3.6478837973102056 -0.498895602584414 TQDPSSPGT(ph)TPPQAR ddPTM_A549_PD325901_60min_R1 1 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 T(0.001)QDPS(0.058)S(0.227)PGT(0.357)T(0.357)PPQAR 70.26 0.0020533 2942000.0 756.51 816.26 812.88 938.08 893.32 683.52 898.74 725.72 793.75 717.69 1133.0 True False 833.3103382867731 885.0490948647192 868.0469250445346 996.0230710657443 830.5762849866964 677.9536397403338 932.9420425093984 711.244945283674 760.3914478399789 672.3749309182582 993.6481826787536 0.8386372086348215 0.8907067011170245 0.8735958462726582 1.0023900696729382 0.8358856781155324 0.6822874046955472 0.9389058006369027 0.7157915222732506 0.7652521899552585 0.6766730344191018 1.0 9.95659132229679 -10.942636264069051 1.238656054432502 0.9988242370252245 0.8335667678339039 0.0 0.1296805574774595 0.45010908219961543 1.2414457362678473 0.061759574410790795 0.014894339432898248 1.1412051843416862e-11 10.942636264069051 -0.16525746919132056 TQEEGEERAES(ph)EQEAYLRED ddPTM_A549_MK2206_60min_R1 1 TQEEGEERAESEQEAYLRED 20 2 Q9NR28-2;Q9NR28-3;Q9NR28 Q9NR28-2 DIABLO Diablo homolog, mitochondrial 1 T(0.004)QEEGEERAES(0.995)EQEAY(0.001)LRED 41.423 0.027254 1613400.0 207.37 164.54 355.07 0.0 122.89 134.05 154.65 120.87 120.03 293.19 127.11 True False 242.36898629026282 172.91438319283705 405.4242651475757 0.0 104.81304379139866 148.2350820248116 182.74790317797562 138.0036926488505 92.8433966485233 226.95817537070164 95.54507894246699 2.53669774490643 1.8097675474940833 4.243277305696761 0.0 1.0970009649006875 1.5514674713291323 1.9126877616378162 1.444383051187285 0.9717234804361768 2.3754041326122697 1.0 6.578109663871067 -6.269992763261967 24.999857105187647 1.08059250844223 2.757899572254125 0.4132234740735726 0.8013351174761161 333.3578149312494 974339.9156431642 0.09334166789336554 0.22012702940181547 5.370407451157873e-07 6.269992763261967 1.677307063811895 TQEIS(ph)RPNS(ph)PSEGEGESSDSR ddPTM_A549_PD325901_60min_R1 1 TQEISRPNSPSEGEGESSDSR 21 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 T(0.012)QEIS(0.983)RPNS(0.548)PS(0.444)EGEGES(0.005)S(0.006)DS(0.001)R 62.376999999999995 0.00051582 9909300.0 1000.9 944.77 1112.5 983.39 806.21 784.82 932.59 752.46 1511.3 1331.8 893.45 True False 1102.510631176364 1024.3890835706027 1188.0009400059603 1044.131766859267 749.5845908735104 778.4286861262412 968.0802227828298 737.4515950065496 1447.7853166873192 1247.7099207135898 783.5613140461895 1.4070508732535167 1.3073502548011409 1.5161556839391508 1.3325463472252501 0.956638079798467 0.9934496154570928 1.2354875176057545 0.9411536554790634 1.847698821692944 1.5923577368446236 1.0 9.613902360464111 -11.354010398788638 2.015723194507604 0.997438582728806 1.37217920892772 0.0 0.31733530289874096 0.5334346244802484 3.9179467284315614 0.254563439873193 0.048297830823297264 4.4257777511115264e-12 11.354010398788638 0.374740626198914 TQEIS(ph)RPNSPS(ph)EGEGESSDSR ddPTM_A549_MK2206_60min_R1 2 TQEISRPNSPSEGEGESSDSR 21 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 T(0.018)QEIS(0.977)RPNS(0.247)PS(0.758)EGEGESSDSR;T(0.049)QEIS(0.901)RPNS(0.238)PS(0.797)EGEGES(0.007)S(0.006)DS(0.002)R 75.703 7.7222e-05 17237700.0 1187.08 1586.7 1686.1 1344.72 1940.94 1822.44 1208.31 1890.98 1694.72 1890.1299999999999 2283.45 True False 1387.4300826804517 1667.4562526563432 1925.214333695686 1674.1764603667755 1655.4302971476716 2015.289391162234 1427.8442863820233 2159.032205883372 1310.868625911733 1463.148320247703 1716.4063449860453 0.808334277447414 0.9714810583911585 1.1216541696665299 0.9753963362215297 0.9644745849276912 1.1741330350177765 0.8318801026068404 1.2578794131065307 0.7637286064229684 0.8524486783224975 1.0 10.745175424036846 TQEIS(ph)RPNSPS(ph)EGEGESSDSR ddPTM_A549_PD325901_60min_R1 1 TQEISRPNSPSEGEGESSDSR 21 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 T(0.013)QEIS(0.882)RPNS(0.287)PS(0.811)EGEGES(0.003)S(0.003)DS(0.001)R 62.376999999999995 0.00051582 17392000.0 1203.8 904.32 948.26 1138.1 1305.3 1126.2 662.6 1279.9 1079.8 929.34 1091.9 True False 1326.0088898092788 980.5302201113161 1012.6146259506093 1208.3978521873646 1213.6202310405395 1117.0286005904202 687.8156055886327 1254.3713904378733 1034.4197611056493 870.6613137978434 957.6032221243887 1.384716403593132 1.0239420643719903 1.057446970264136 1.2618982729680066 1.267351866619863 1.1664837531690373 0.718267847995282 1.3099072365850244 1.0802175026216467 0.909208838986914 1.0 9.903284196416056 -7.553861953779074 24.999873875208035 1.0374586925967755 1.188159849060205 0.24291692405147325 0.1624211826443628 254.4263266977962 205291.71532238618 0.022903081657473838 0.033970917618807384 2.7934316291663985e-08 7.553861953779074 0.15070115646342952 TQEISRPNS(ph)PSEGEGESSDSR ddPTM_A549_MK2206_60min_R1 2 TQEISRPNSPSEGEGESSDSR 21 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 TQEIS(0.001)RPNS(0.948)PS(0.052)EGEGESSDSR;TQEISRPNS(0.841)PS(0.159)EGEGESSDSR 125.82 4.6503e-16 21808000.0 876.23 971.23 781.52 1094.67 2088.12 1494.13 1500.79 2153.62 2197.3 2299.56 2319.28 True False 1024.1162022332883 1020.6614585412622 892.3512876281674 1362.8641991416046 1780.9603141158386 1652.2378448767752 1773.4641164595794 2458.9022301846408 1699.6150583670774 1780.0877988862192 1743.338767128352 0.5874453213245665 0.5854636389590003 0.5118633879163135 0.7817552301590416 1.021580170014493 0.9477434197131752 1.0172802612431147 1.4104557740289188 0.974919556895246 1.0210796848270636 1.0 10.767637227141776 -6.5541071152997885 2.664354012365967 1.0223467117226275 0.5640281702434958 0.7581905744119588 0.1225108774105769 0.11109683588036205 1.5875000566856066 0.01846241251254166 0.04443620720995059 2.7918551673123485e-07 6.5541071152997885 -0.45831854147913165 down TQEISRPNS(ph)PSEGEGESSDSR ddPTM_A549_PD325901_60min_R1 2 TQEISRPNSPSEGEGESSDSR 21 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 TQEIS(0.001)RPNS(0.827)PS(0.172)EGEGESSDSR;TQEISRPNS(0.5)PS(0.5)EGEGESSDSR 140.55 5.6493999999999994e-21 33306000.0 1281.33 1205.28 1423.47 1317.79 1691.72 1492.04 1486.6599999999999 1524.02 1292.08 1461.27 1801.0900000000001 True False 1411.4096783347084 1306.8531755305282 1520.0752342204808 1399.1868953817657 1572.8994233171704 1479.889320924285 1543.235659831567 1493.6222255294394 1237.7783709292348 1369.0051628181022 1579.5673480502003 0.8935419436701678 0.8273488162082439 0.9623364499759026 0.88580388617738 0.9957786385358873 0.9368953610943169 0.9769989622389443 0.9455894535761008 0.783618610790565 0.8666962915560305 1.0 10.625313735280677 -5.752941134741002 24.97966362795045 0.9159401598250178 0.8604453952651067 0.123602340776236 0.06300949032881992 435.131730509306 1278991.4402580755 0.011476515256556026 0.04305922801530582 1.76627720968081e-06 5.752941134741002 -0.05549476455991109 TQEPAGSLEENNSDKNS(ph)GPQGPRRTPTMPQEEAAEK ddPTM_A549_MK2206_60min_R1 3 TQEPAGSLEENNSDKNSGPQGPRRTPTMPQEEAAEK 36 3 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 T(0.01)QEPAGS(0.031)LEENNS(0.11)DKNS(0.411)GPQGPRRT(0.411)PT(0.027)MPQEEAAEK;T(0.038)QEPAGS(0.029)LEENNS(0.113)DKNS(0.36)GPQGPRRT(0.36)PT(0.099)MPQEEAAEK;TQEPAGS(0.001)LEENNS(0.007)DKNS(0.487)GPQGPRRT(0.487)PT(0.018)MPQEEAAEK 100.41 1.5791e-14 56702000.0 3007.63 3374.02 4077.5 2540.93 4079.5 3875.88 3208.5899999999997 2747.4700000000003 5415.6 4974.9 4914.2 True False 3515.2444145063573 3545.74320639538 4655.7508129079915 3163.4579640666825 3479.4109540809704 4286.023048999079 3791.5492703383165 3136.9322862739896 4188.975246936123 3851.0666347818924 3693.8685149797147 0.9516430810276585 0.9598996802448048 1.2603997121249886 0.8564078421410879 0.9419422862429845 1.1603074206940516 1.0264440260833534 0.8492268399789581 1.1340347470270276 1.0425565011761229 1.0 11.850916798474918 TQEPAGSLEENNSDKNS(ph)GPQGPRRTPTMPQEEAAEK ddPTM_A549_PD325901_60min_R1 2 TQEPAGSLEENNSDKNSGPQGPRRTPTMPQEEAAEK 36 3 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 TQEPAGS(0.001)LEENNS(0.028)DKNS(0.431)GPQGPRRT(0.431)PT(0.108)MPQEEAAEK;T(0.119)QEPAGS(0.066)LEENNS(0.05)DKNS(0.379)GPQGPRRT(0.379)PT(0.007)MPQEEAAEK 84.876 6.4943e-07 69263000.0 7098.5 8195.3 8034.1 8031.5 9032.0 9281.6 9102.9 9602.599999999999 9384.9 8262.8 9424.5 True False 7819.134494360493 8885.946692407855 8579.342338967988 8527.587514140074 8397.623478708461 9206.013726904677 9449.315840798014 9411.068609906026 8990.485289868877 7741.08539786173 8265.346246827821 0.9460141488157763 1.0750846276788726 1.0379894662320621 1.0317278017739304 1.0160038343138265 1.1138085994204874 1.143245008571128 1.1386175882852971 1.0877324459721647 0.9365712175497428 1.0 13.012859541943536 -5.256006482326744 24.10620943638459 1.0582813615009365 0.9460140691201104 0.22634975709809413 0.059559016127059335 387.77780636220564 1720507.927867676 0.007738859447426848 0.08928743046547076 5.546174346158863e-06 5.256006482326744 -0.11226729238082611 TQEPAGSLEENNSDKNSGPQGPRRT(ph)PTMPQEEAAEK ddPTM_A549_MK2206_60min_R1 1 TQEPAGSLEENNSDKNSGPQGPRRTPTMPQEEAAEK 36 3 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 TQEPAGS(0.002)LEENNS(0.012)DKNS(0.045)GPQGPRRT(0.886)PT(0.055)MPQEEAAEK 106.47 1.173e-14 25186000.0 2402.0 3312.9 3068.5 2251.0 4023.8 3180.5 2899.9 2529.4 4497.9 4714.5 4627.8 True False 2807.398876738254 3481.5124594600115 3503.6594406886966 2802.49510105123 3431.90435029563 3517.058398954968 3426.7742930864006 2887.9501959626255 3479.132831670358 3649.4911756375495 3478.589539217598 0.8070509167832696 1.0008402601713886 1.007206915673281 0.8056412144795805 0.9865792763430007 1.011058752205074 0.9851045242483965 0.8302072329614897 1.0001561818221538 1.049129578092847 1.0 11.764286740949352 -2.0000000004371175 0.11433888286098942 1.0320290853978433 0.6293526959291574 0.17659972653267086 0.0785955915745006 131.2480804312543 1.0048386305200103 0.32008595143374924 8.419588288004375 0.009999999989935 2.0000000004371175 -0.4026763894686859 TQEPAGSLEENNSDKNSGPQGPRRT(ph)PTMPQEEAAEK ddPTM_A549_PD325901_60min_R1 1 TQEPAGSLEENNSDKNSGPQGPRRTPTMPQEEAAEK 36 3 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 TQEPAGSLEENNS(0.005)DKNS(0.428)GPQGPRRT(0.567)PT(0.001)MPQEEAAEK 152.41 7.459499999999999e-41 26224000.0 2136.4 2051.0 1809.0 2391.2 2838.9 2795.1 2578.3 3227.3 3257.4 2922.9 3233.0 True False 2353.285755265445 2223.8449679851265 1931.7696184007025 2538.8989931907795 2639.505457673324 2772.3376323124503 2676.4186173998974 3162.9289697321296 3120.502805913634 2738.3475951747646 2835.3614956755623 0.8299773270020878 0.7843250221803785 0.6813133427067412 0.8954410212112489 0.9309237858026379 0.9777721946710376 0.9439426406410324 1.1155293512154154 1.1005661220528542 0.9657842921797586 1.0 11.46931696860236 -6.963503529104554 1.0087669620985176 1.0491811907801702 0.7653444639674072 0.7346774126589479 0.06335974028890223 0.18669618498632437 0.36933570500442947 0.010609523766556956 0.029628254606488377 1.0876682991333816e-07 6.963503529104554 -0.28383672681276306 TQHEILR ddPTM_A549_MK2206_60min_R1 1 TQHEILR 7 0 P49257 P49257 LMAN1 Protein ERGIC-53 0 58.917 0.033943 844930.0 298.34 382.7 443.44 281.71 529.81 253.15 321.0 340.65 515.9 502.5 607.8 False True 348.69249828729835 402.17779535613676 506.326459957307 350.7289626464425 451.8756508350631 279.93816497263 379.3215449086982 388.9381806968718 399.0494737230125 388.98490099859345 456.8664855733728 0.7632262582134585 0.8802961216369349 1.1082591434166185 0.7676837188139846 0.9890759447324174 0.6127351727743923 0.8302678285377951 0.8513169448372861 0.8734487784154286 0.8514192073213968 1.0 8.835628804195677 -10.249965507912389 0.8038614886461688 0.9950266744005337 0.8549698419772831 0.0012135873317359325 0.1271767497174522 0.8317419259106952 1.0323328549416495 0.06346822300369699 0.023205674165437135 5.623859886556287e-11 10.249965507912389 -0.14005683242325062 TQKPNPAVPPPLS(ph)SSPLYSR ddPTM_A549_PD325901_60min_R1 1 TQKPNPAVPPPLSSSPLYSR 20 1 O75140;H0Y770;A0A2R8Y6V4;A0A5F9UWT1;A0A2R8Y5T1;A0A2R8Y5K9;A0A2R8Y721;A0A2R8Y6H3;O75140-6;A0A2R8Y842;A0A2R8Y7U0;O75140-8;O75140-5;O75140-1;O75140-4;O75140-9;A0A2R8YEW8;H7C1T0 O75140 DEPDC5 DEP domain-containing protein 5 1 TQKPNPAVPPPLS(0.324)S(0.324)S(0.324)PLY(0.012)S(0.018)R 49.662 0.0041728 6841800.0 2153.5 2187.2 2084.5 2523.7 3475.0 2986.6 2663.9 2919.5 2892.4 2477.4 3427.3 True False 2372.1217346770895 2371.523019979067 2225.966705116786 2679.5832172614473 3230.9279880991917 2962.278119804074 2765.2761722420137 2861.268282196556 2770.842486591944 2320.976541204271 3005.7638274447418 0.7891909913273779 0.7889918024581276 0.7405660700259088 0.8914816236708168 1.0749107959176774 0.9855325600622336 0.9199911673010014 0.9519271793981817 0.9218430474451119 0.7721752853674396 1.0 11.553515941168579 -6.460580161005147 4.759506996028033 0.9669310791246253 0.7772583123593518 0.5112132832065996 0.0722727235022538 0.07655939010555673 3.4683889200311104 0.006654891825209064 0.01562086610178719 3.462739643143978e-07 6.460580161005147 -0.18967276676527345 TQKT(ph)PPGLQHEYAAPADYFR ddPTM_A549_PD325901_60min_R1 2 TQKTPPGLQHEYAAPADYFR 20 1 Q5JRG1;H7BYF2;Q9BVL2-2;Q9BVL2-3;Q9BVL2 Q5JRG1 NUPL1 Nucleoporin p58/p45 1 T(0.229)QKT(0.768)PPGLQHEY(0.003)AAPADYFR;T(0.206)QKT(0.79)PPGLQHEY(0.004)AAPADYFR 89.434 2.4102000000000002e-06 11802500.0 4211.6 3388.1 3189.5 5086.8 4299.6 4212.4 4365.8 4507.0 5007.6 5154.1 5575.3 True False 4639.1585315839475 3673.6270775379835 3405.958650021583 5401.000083038996 3997.6109288147586 4178.095611016769 4531.9429080574255 4417.104349326896 4797.147986398084 4828.6692463957925 4889.573444738622 0.9487859388994082 0.75131851869225 0.6965758237431797 1.1045953484655577 0.8175786648866782 0.8544908177036523 0.9268585407862067 0.9033721242248398 0.9810974394013875 0.987544067180673 1.0 12.255492897896437 -8.034583711548638 0.45012310725915206 1.0046227109127595 0.8293519483583122 0.2156493508589883 0.10030161164377727 0.940406343025134 0.42805271052068167 0.03421229739869885 0.058926005620057724 9.234561723492691e-09 8.034583711548638 -0.1752707625544473 TQLS(ph)PSIK ddPTM_A549_MK2206_60min_R1 3 TQLSPSIK 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.003)QLS(0.918)PS(0.078)IK;T(0.096)QLS(0.792)PS(0.111)IK;T(0.001)QLS(0.902)PS(0.097)IK 93.561 0.0025570000000000002 31260900.0 10743.7 11875.7 11000.9 10510.2 14724.2 12436.699999999999 10456.300000000001 12228.199999999999 14512.599999999999 14536.4 15420.099999999999 True False 12556.973901753852 12480.122404784104 12560.993039293571 13085.199471820808 12558.28968502979 13752.743339186676 12356.074361460502 13961.584797291915 11225.519271860032 11252.61714403175 11590.86359689037 1.0833510201192147 1.0767206688664948 1.0836977706012751 1.1289236011138413 1.0834645391219133 1.1865158470915231 1.066018442730654 1.2045336122355514 0.9684799737330742 0.9708178385474775 1.0 13.500700440331773 -8.785308709790378 24.999849600960214 0.9851155214383885 1.1121672569309502 0.6528121044266965 0.043582394100410767 95.25875426176998 99770.0596885689 0.007054477185889046 0.0075120630246662615 1.6394240062305328e-09 8.785308709790378 0.12705173549256166 TQLS(ph)PSIK ddPTM_A549_PD325901_60min_R1 2 TQLSPSIK 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.001)QLS(0.982)PS(0.018)IK;TQLS(0.996)PS(0.003)IK 153.23 0.0005055 72159000.0 25667.0 25555.0 25339.0 24418.0 30645.0 23542.0 24140.0 23316.0 24712.0 28916.0 27727.0 True False 28272.694944953255 27708.609535280302 27058.6569157852 25926.24440269841 28492.600919510714 23350.28175732522 25058.660909914863 22850.94408895185 23673.440578294863 27090.238825164568 24316.754775934536 1.1626837217988388 1.1394863249886686 1.1127577328930516 1.066188504247151 1.1717271149894093 0.9602548519522925 1.0305100800175262 0.9397201353351085 0.9735444057577807 1.1140565044466728 1.0 14.5696630844385 -7.266480976655471 24.99564588641968 0.9851142635379236 1.1264979322045034 0.5930656879328692 0.05140813521268292 126.925889353352 629282.8719770301 0.004855572621344531 0.007907917918076034 5.414009622790188e-08 7.266480976655471 0.1413836686665798 TQLS(ph)PSIKR ddPTM_A549_MK2206_60min_R1 4 TQLSPSIKR 9 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TQLS(0.989)PS(0.011)IKR;TQLS(0.931)PS(0.069)IKR;TQLS(0.955)PS(0.045)IKR;TQLS(0.991)PS(0.009)IKR 92.19 0.00042327 220299900.0 12312.300000000001 14247.5 13398.099999999999 11426.0 16100.300000000001 12084.5 11604.8 11619.6 17137.5 18350.5 18538.8 True False 14390.315233165855 14972.636894007217 15298.152045719822 14225.37051293263 13731.967197938446 13363.273768958115 13713.24194503571 13266.713883532588 13255.883612963984 14205.109305024253 13935.10431514914 1.0326664880091243 1.074454597209592 1.0978139596048007 1.0208298546762895 0.9854226339023627 0.9589647459208916 0.9840788870254643 0.9520354913389539 0.9512582979772344 1.0193758858038533 1.0 13.766436181731757 -6.581349308463496 2.886637062524653 0.9740376769287573 1.0686510696079201 0.7211950680705257 0.024288949965749287 0.09489303181542917 1.59883957235629 0.003447168596835882 0.008026595824107148 2.6221087003101453e-07 6.581349308463496 0.0946133926791628 TQLS(ph)PSIKR ddPTM_A549_PD325901_60min_R1 5 TQLSPSIKR 9 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TQLS(0.977)PS(0.023)IKR;TQLS(0.854)PS(0.146)IKR;TQLS(0.993)PS(0.007)IKR;T(0.001)QLS(0.995)PS(0.004)IKR;T(0.002)QLS(0.858)PS(0.14)IKR 95.273 0.00038663 288972300.0 31094.899999999998 31478.600000000002 31325.4 30458.0 37751.4 32904.399999999994 33390.1 35478.5 34912.0 36390.9 38633.200000000004 True False 34251.631357144484 34131.4120961563 33451.33001893279 32339.321484863147 35099.87189925982 32636.437475819053 34660.77852726379 34770.85348515515 33444.77004975034 34093.17236349016 33881.5613160325 1.0109224612661776 1.0073742404546622 0.9873019046233821 0.9544814414901365 1.0359579233041667 0.9632506947185971 1.0229982675226532 1.0262470835044384 0.9871082898982145 1.0062456108643825 1.0 15.048212737424906 TQLS(ph)QAEVHK ddPTM_A549_MK2206_60min_R1 2 TQLSQAEVHK 10 0 K7EMZ9;A0A140TA76 K7EMZ9 LSM14A 1 T(0.033)QLS(0.967)QAEVHK;T(0.03)QLS(0.97)QAEVHK 101.55 0.00012973 28191000.0 5794.3 5706.6 5935.6 5494.1 7682.3 6229.0 4679.5 5805.9 7736.200000000001 9274.4 9050.2 True False 6772.236182966051 5997.041565140665 6777.357332948297 6840.15474663952 6552.243846681276 6888.148645524439 5529.704577570885 6628.9041048230365 5983.963052172837 7179.30659864946 6802.7855671868065 0.9955092830842545 0.8815567543488887 0.9962620849963046 1.0054932173127673 0.963170716167504 1.0125482535785606 0.8128588683205569 0.9744396673029816 0.8796342311650165 1.0553480670151947 1.0 12.73190989882972 TQLS(ph)QGR ddPTM_A549_MK2206_60min_R1 1 TQLSQGR 7 0 Q8ND56-2;Q8ND56 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 TQLS(1)QGR 100.71 0.011151000000000001 42269000.0 7752.6 7671.0 7829.1 7513.2 11416.0 8784.7 7531.0 9804.8 11444.0 8770.1 10152.0 True False 9061.0493471278 8061.421134509868 8939.384105294406 9353.934337280361 9736.721522683752 9714.291123188084 8899.285217157027 11194.660425940678 8851.952272312756 6788.92831890102 7630.978219053771 1.1874033822430903 1.0564073049483127 1.1714597851915867 1.2257844366433317 1.275946706068713 1.2730073188955637 1.1662050344917017 1.4670020152840637 1.1600022982912384 0.889653740846719 1.0 12.897652293401851 -9.873229355805186 1.0907899630814617 1.0251425900533715 1.2202818061613718 0.46990078298401894 0.10618553147203352 0.32873988619299016 0.7950696374514302 0.03231047135955903 0.019447187724673028 1.3389693758712433e-10 9.873229355805186 0.19513921610800034 TQLS(ph)QGR ddPTM_A549_PD325901_60min_R1 1 TQLSQGR 7 0 Q8ND56-2;Q8ND56 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 TQLS(1)QGR 114.5 0.0073742 71182000.0 18271.0 19383.0 19699.0 18770.0 22622.0 18805.0 19532.0 16681.0 15629.0 18471.0 18296.0 True False 20125.8584696007 21016.473434644406 21035.892599710027 19929.3802702371 21033.10876166329 18651.858314777885 20275.300948320517 16348.284369008643 14972.167481311539 17304.73790771942 16045.707987899801 1.2542829823886719 1.3097878542033234 1.310998094666397 1.2420380755567786 1.3108246004180388 1.1624204010719503 1.2635965308361767 1.0188571536598459 0.9330948495761092 1.078465214546411 1.0 13.969899826887946 -8.30810321418795 3.3390107124169575 0.9683305178071981 1.2674730353257517 0.8360572698600068 0.05412927684050684 0.051271300476521876 1.1639251371973467 0.0076058154177230785 0.009464545980463077 4.919226117303388e-09 8.30810321418795 0.2991425175185536 TQLSPS(ph)IK ddPTM_A549_MK2206_60min_R1 1 TQLSPSIK 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.005)QLS(0.164)PS(0.831)IK 80.896 0.0038233000000000004 15924000.0 6838.2 6646.8 7140.7 5554.5 9075.4 7728.1 6767.2 7351.1 9193.7 8774.3 8800.3 True False 7992.320982061409 6985.093729221769 8153.358633901187 6915.35274935098 7740.42068210968 8545.882412502395 7996.712643944372 8393.140936799578 7111.341629322074 6792.179535983994 6614.942634075939 1.2082222664925468 1.0559568110597133 1.232566793837382 1.0454138655303706 1.1701417699733327 1.2919057481284106 1.2088861667144988 1.268815377712197 1.075042071066347 1.0267934148052993 1.0 12.691512929919929 -8.95966082526707 4.685261620146491 1.0316740882157578 1.181838998765179 0.46150798417599403 0.07372031857789355 0.13419637632383774 6.09713155616458 0.013586787750626125 0.014083367564672631 1.0973348567150858e-09 8.95966082526707 0.15016491054942116 TQLSPS(ph)IKR ddPTM_A549_PD325901_60min_R1 1 TQLSPSIKR 9 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.004)QLS(0.405)PS(0.591)IKR 43.68 0.052417 10694000.0 6108.0 4253.1 4071.2 4941.3 6240.9 5581.9 5336.8 4945.6 5810.7 6077.8 6015.5 True False 6728.079663528054 4611.52366325575 4347.496114114397 5246.512878493478 5802.560713936187 5536.442857073047 5539.894844409014 4846.956128251856 5566.496486253564 5694.046670756161 5275.631635396335 1.275312631455665 0.8741178273924932 0.8240712040896291 0.9944805174213667 1.0998798087047006 1.0494369659789786 1.050091292811202 0.9187442306873129 1.0551336543108318 1.0793108890606598 1.0 12.36512811833039 -6.526314054810912 24.95351231489183 1.0270276941892658 0.9677645452696685 0.018374885279042297 0.11533513507093959 243.69623225767768 1770169.0832758625 0.015316311278927089 0.03200968370537598 2.9763633298237033e-07 6.526314054810912 -0.059263148919597275 TQLSQGRS(ph)SPQLDPLRK ddPTM_A549_PD325901_60min_R1 1 TQLSQGRSSPQLDPLRK 17 2 Q8ND56-2;Q8ND56 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 T(0.027)QLS(0.106)QGRS(0.434)S(0.434)PQLDPLRK 41.521 0.018151 4492600.0 1335.4 912.11 1296.7 1763.7 1448.5 1659.6 1147.4 1863.3 1453.4 1464.6 1751.3 True False 1470.9688249304797 988.9767107503233 1384.7018596905434 1872.6397433466784 1346.7623570537207 1646.0847678386256 1191.0649348813724 1826.1350197694273 1392.3186523346458 1372.1249060498 1535.9012024053857 0.9577235974727965 0.6439064629948071 0.9015565959073097 1.2192449230548972 0.8768548100258967 1.071738706409423 0.7754827804132436 1.1889664627578287 0.9065157642653875 0.8933679483425794 1.0 10.584869701643022 -5.994124303563975 24.981428570053023 0.9784136402552203 0.7937941032244966 0.2083766221658877 0.14293804273664223 158.89864399316264 675564.8187563067 0.017193636449009148 0.05324301769714502 1.0136212260196e-06 5.994124303563975 -0.18461953703072365 TQMAEVLPS(ph)PR ddPTM_A549_MK2206_60min_R1 8 TQMAEVLPSPR 11 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR 208.51 8.5651e-31 566263000.0 62499.2 69014.9 60666.0 57941.8 85698.2 70306.1 61765.1 70586.9 95176.5 90888.20000000001 91239.4 True False 73047.53700126533 72527.46362352806 69269.3510278053 72137.54360110626 73092.10830371919 77745.84483658778 72987.01916959569 80592.80923831505 73619.1747156393 70356.49249540365 68582.13890066335 1.0651102192521265 1.0575270002672161 1.010020278430472 1.0518415546297364 1.0657601159040582 1.133616508362293 1.064227805366533 1.1751282554055122 1.0734453007111917 1.0258719489240535 1.0 16.065545278475383 -5.313697378519476 5.700490323684661 1.0546140065928786 1.0651495131881805 0.0 0.04967783379085847 1.7412896891295708 128.13153278705798 0.007650613373084963 0.049093632309552264 4.856267727141522e-06 5.313697378519476 0.010535506595301891 TQMAEVLPS(ph)PR ddPTM_A549_PD325901_60min_R1 5 TQMAEVLPSPR 11 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR 184.96 1.1932e-18 1005067900.0 37342.9 36034.5 35736.5 38272.2 42395.7 39978.5 39743.9 40786.100000000006 40908.9 42051.6 44208.2 True False 41133.92371760999 39071.25377808875 38161.7937910319 40636.18687152732 39417.97228922499 39652.92835082944 41256.3758631966 39972.58923942353 39189.64119753183 39396.45479942906 38770.87165886926 1.060949159965563 1.0077476235732443 0.9842903230756219 1.0481112529290104 1.0166903812751318 1.0227504993883314 1.064107514171886 1.0309953717607316 1.0108011380901407 1.0161353901471206 1.0 15.24268555012453 -8.918509181905744 3.328169985376543 1.0044413683806683 1.0283074047918617 0.13790932061495897 0.02224149334822604 0.2940242576134067 6.178635567854098 0.003996938548431761 0.0041564320456698575 1.2063985821046399e-09 8.918509181905744 0.023866036411193337 TQNVLGEK ddPTM_A549_MK2206_60min_R1 2 TQNVLGEK 8 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;H0YF32;E9PQ96;E9PJH4;E9PK82 P23396 RPS3 40S ribosomal protein S3 0 ; 114.5 0.0036710000000000002 10729700.0 6399.7 7033.3 6634.4 6355.200000000001 8039.900000000001 6435.9 6253.0 6548.4 8890.7 8245.8 10433.3 False True 7479.812902357121 7391.2649283467945 7575.257680725147 7912.224285295771 6857.24136039113 7116.942666195335 7389.0891598569815 7476.655753633923 6876.970645530501 6383.0680530431855 7842.423665568726 0.9537629209190002 0.9424720269573431 0.9659332374484508 1.0089003887960677 0.8743778266528844 0.9074927560266179 0.9421945912330574 0.9533603478296301 0.8768935393943409 0.8139152289192592 1.0 12.937083866290237 -6.73900919669008 24.997873545071382 0.9349885941347084 0.9658293178119377 0.12141013157424596 0.05189649889230464 524.6241509464494 584677.5988146145 0.007113981810000642 0.014800850275569356 1.8238570796186608e-07 6.73900919669008 0.030840723677229342 TQNVLGEK ddPTM_A549_PD325901_60min_R1 2 TQNVLGEK 8 0 P23396;P23396-2;E9PL09;F2Z2S8;H0YCJ7;E9PPU1;H0YF32;E9PQ96;E9PJH4;E9PK82 P23396 RPS3 40S ribosomal protein S3 0 ; 118.71 0.0034273000000000003 16234800.0 6602.6 6419.4 6860.6 7138.599999999999 7817.9 7636.6 7774.8 7457.799999999999 8165.700000000001 7716.599999999999 8087.0 False True 7272.8910914227745 6960.385366886257 7326.201572139228 7579.535109063104 7268.797674290837 7574.410061506662 8070.67426853381 7309.048328469081 7822.52402598667 7229.372559076805 7092.350267716756 1.0254557117021998 0.9813933469373075 1.0329723287197088 1.06869159347134 1.024878552230738 1.067968977221016 1.137940733873541 1.0305537730896766 1.1029522979982458 1.0193197298762517 1.0 12.79204807259348 -5.981487756935286 5.7493408797825944 1.0553324128936585 1.0036878753647418 0.22179628527712525 0.03850301409513429 0.2185218952361317 23.883429430326196 0.006236917226299092 0.019262944195897535 1.0435475506481322e-06 5.981487756935286 -0.051644537528916734 TQPDGTSVPGEPAS(ph)PISQR ddPTM_A549_MK2206_60min_R1 4 TQPDGTSVPGEPASPISQR 19 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 TQPDGTSVPGEPAS(1)PISQR;TQPDGT(0.001)SVPGEPAS(0.986)PIS(0.013)QR;TQPDGTSVPGEPAS(1)PISQR;TQPDGT(0.003)S(0.003)VPGEPAS(0.888)PIS(0.105)QR 357.72 9.928199999999996e-256 833328000.0 13345.170000000002 14309.210000000001 13084.07 11718.48 17607.1 14194.83 12180.93 12275.06 19200.0 20024.1 19870.899999999998 True False 15597.508437918832 15037.487669422488 14939.587869686095 14589.508126062548 15017.118913984323 15696.917488834433 14394.047308488203 14015.087345794636 14851.230656099706 15500.641902658577 14936.407121059448 1.0442610670358115 1.006767393761015 1.0002129527269086 0.9767749370926163 1.0054036952977183 1.050916553198574 0.9636887366435969 0.938317175757361 0.9942973926547805 1.0377758035802058 1.0 13.866545536243926 -7.788619898131334 24.999986875596115 0.9895838261145343 1.0110077249751854 0.1646749326176412 0.029830289805939828 364.5232263795915 335278.9805146156 0.004357509205961924 0.0060215695072317246 1.6269720862583764e-08 7.788619898131334 0.021423898860651103 TQPDGTSVPGEPAS(ph)PISQR ddPTM_A549_PD325901_60min_R1 6 TQPDGTSVPGEPASPISQR 19 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(0.994)PIS(0.006)QR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(0.997)PIS(0.003)QR;TQPDGT(0.012)S(0.012)VPGEPAS(0.896)PIS(0.081)QR 332.07 1.1578999999999995e-205 976080000.0 16628.7 16688.15 18188.54 16648.46 20223.54 18230.52 17340.7 19040.27 17322.65 20307.96 21849.1 True False 18316.833382598063 18094.518967567525 19422.923700976186 17676.797562804008 18803.10831782548 18082.05668942964 18000.609827695145 18660.49687804714 16594.639261638054 19025.71193982186 19161.799212856447 0.9559036277923494 0.9443016684689588 1.0136273470575006 0.9225019720978972 0.9812809386505675 0.9436512974886845 0.9394008165797807 0.9738384517424145 0.8660271969922334 0.9928979908659474 1.0 14.225945410018024 -7.453564737669804 8.563722869851299 0.9388018719360129 0.962963379078524 0.0 0.04060159976951044 1.056834876330935 122.77205688781096 0.007654947881605547 0.012233432154017879 3.5191296106348364e-08 7.453564737669804 0.024161507142511085 TQPDVMS(ph)QNAR ddPTM_A549_MK2206_60min_R1 2 TQPDVMSQNAR 11 0 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 1 T(0.001)QPDVMS(0.999)QNAR;TQPDVMS(1)QNAR 54.7 0.0065429 11970600.0 798.29 806.3399999999999 686.62 712.8299999999999 984.8299999999999 871.16 647.27 710.63 1383.56 1183.15 1409.48 True False 933.0218356833382 847.3792618433952 783.9930406275618 887.4733820001543 839.9628115964124 963.3455729707937 764.8705806014119 811.3639787131023 1070.1858690913184 915.875593266638 1059.4672163309601 0.8806519175878657 0.7998164065689106 0.739988013355059 0.8376600694390172 0.792816236924524 0.9092736029218108 0.7219388847634517 0.7658226382152117 1.010117021645538 0.8644680827769319 1.0 10.049123230967258 -8.767349384272073 24.999862851048878 1.0047774993733984 0.8048465465689589 0.4670114673671413 0.06758125087205032 47.06091408485717 199071.46301473526 0.008750254129435645 0.009435779728856506 1.7086401831831548e-09 8.767349384272073 -0.1999309528044395 TQPDVMS(ph)QNAR ddPTM_A549_PD325901_60min_R1 3 TQPDVMSQNAR 11 0 Q96Q15;J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2 Q96Q15 SMG1 Serine/threonine-protein kinase SMG1 1 T(0.001)QPDVMS(0.999)QNAR;T(0.003)QPDVMS(0.997)QNAR;T(0.003)QPDVMS(0.997)QNAR 63.091 0.0024546 22360100.0 3265.3199999999997 2845.83 3226.87 2633.58 3510.98 3185.97 3234.0299999999997 3163.15 3544.9500000000003 3047.6800000000003 3635.48 True False 3596.812882598466 3085.658081541254 3445.8648029456463 2796.250255305859 3264.380877023455 3160.024516624986 3357.1027813791184 3100.0584918068294 3395.968079395695 2855.248964679676 3188.339007206493 1.1281149446369139 0.9677948532345045 1.0807711460911391 0.8770241335647152 1.0238499951369937 0.9911193601064665 1.0529315652417055 0.9723114401573589 1.0651213913325732 0.8955286618600015 1.0 11.63858931989174 -8.765472661274822 24.99955986935099 1.0307517637291108 1.0091747807216296 0.0 0.0754839231688114 375.9450214832446 2330211.0432173926 0.0104285402130953 0.011292098454441816 1.7160397309777224e-09 8.765472661274822 -0.021576983007481232 TQPHHS(ph)TPTK ddPTM_A549_MK2206_60min_R1 1 TQPHHSTPTK 10 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 T(0.001)QPHHS(0.499)T(0.499)PTK 72.958 0.0022639 4218800.0 583.57 549.18 389.15 213.29 775.5 539.66 507.14 450.19 884.41 1074.6 997.97 True False 682.0623490833235 577.1309162625636 444.3373216046949 265.54605957495204 661.4249772986377 596.7664630026841 599.2807734735113 514.0058111490525 684.0925471125595 831.8471136578868 750.1465064291858 0.9092388529942591 0.7693576005703161 0.5923340544766512 0.3539922632433398 0.8817277313562701 0.7955332163624748 0.7988849755845443 0.6852072318456833 0.9119452550261768 1.1089128677244777 1.0 9.551028576659776 -8.819188601506205 0.675773803868459 0.9886288727908743 0.6934791781976294 0.4041815087184356 0.15132256251668127 0.47852693187948125 0.46838744366944923 0.04413829497236488 0.04278810755477577 1.5163916994844252e-09 8.819188601506205 -0.2951496945932449 TQPHHST(ph)PTK ddPTM_A549_MK2206_60min_R1 1 TQPHHSTPTK 10 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 TQPHHS(0.385)T(0.612)PT(0.002)K 59.11600000000001 0.0047453999999999994 4326200.0 734.59 683.06 423.83 297.02 876.13 697.47 598.02 480.86 904.13 1021.9 978.79 True False 858.5708329988151 717.8248364148495 483.93546708394666 369.7899133337345 747.2524376023927 771.2758124568845 706.6724931037377 549.0233775719882 699.3459985989283 791.0520802596268 735.7294297702559 1.1669654607495021 0.9756641604495861 0.6577628235356356 0.5026167207273572 1.0156620183533163 1.0483144771002684 0.9605059475796806 0.7462300070603811 0.950547810514133 1.0751942878058396 1.0 9.523031491251233 TQPHHST(ph)PTK ddPTM_A549_PD325901_60min_R1 2 TQPHHSTPTK 10 0 Q12789;Q12789-3 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 TQPHHS(0.116)T(0.883)PT(0.001)K;TQPHHS(0.024)T(0.972)PT(0.003)K 76.32600000000001 0.00071432 12754400.0 1438.3 1501.8600000000001 1065.1200000000001 1143.58 1432.93 1110.4099999999999 995.8 971.97 1390.58 1709.83 1929.8000000000002 True False 1584.3151571795017 1628.427012978129 1137.405448286876 1214.216339341381 1332.2859401401374 1101.3671891152626 1033.6957139226681 952.5832958542854 1332.1387584722106 1601.8710419985873 1692.4468340101148 0.9361092622481949 0.9621732158756822 0.6720479635935662 0.7174324858786816 0.7871951504576333 0.6507543793890782 0.6107699770239815 0.5628438522923742 0.7871081866222152 0.9464823413111799 1.0 10.724894798808185 -10.092176289686025 0.9753061812374585 0.9776807685058981 0.7394320055079988 0.3518240385317456 0.11931341495961964 0.3997483075234595 0.7622684210647098 0.050845518650714086 0.024732485708982534 8.087675359997249e-11 10.092176289686025 -0.23824876299789932 TQPSMVSNPGS(ph)CSDPQPSPEMKPHSYLDAIR ddPTM_A549_MK2206_60min_R1 1 TQPSMVSNPGSCSDPQPSPEMKPHSYLDAIR 31 1 C9J494;Q9H000-2;Q9H000 C9J494 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 1 TQPSMVS(0.056)NPGS(0.327)CS(0.327)DPQPS(0.28)PEMKPHS(0.01)YLDAIR 58.11 0.00082524 4162400.0 726.03 1289.8 901.23 543.92 1107.6 841.76 778.38 724.66 1158.1 1255.8 1445.2 True False 848.5661142707221 1355.4453108187759 1029.0379656939467 677.1804244174969 944.673507228848 930.8344844849339 919.8015704860833 827.3827741781748 895.7921991056803 972.1139078090216 1086.3169545091123 0.781140449615991 1.2477438607512832 0.9472723052168057 0.623372784164547 0.8696113075540919 0.8568719107450199 0.8467156539057475 0.7616403028083591 0.8246140275979336 0.894871339137207 1.0 10.085229384105826 -4.949689185823361 16.434100463075957 0.8975318528273261 5.0421571880184176e-05 0.03692851963799926 0.14758392196792972 8648440.196155187 68930509.67609704 0.020711787898652377 249388853.25924817 1.1228217434951913e-05 4.949689185823361 -0.8974814312554459 TQPSSGVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_A549_MK2206_60min_R1 2 TQPSSGVDSAVGTLPATSPQSTSVQAK 27 0 Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 Q13428 TCOF1 Treacle protein 1 TQPSSGVDSAVGTLPAT(0.241)S(0.718)PQS(0.032)T(0.008)SVQAK;TQPSSGVDSAVGTLPAT(0.135)S(0.703)PQS(0.135)T(0.026)S(0.001)VQAK 151.73 1.0279e-33 48034000.0 3733.6000000000004 4188.3 3475.0 2920.4 4423.3 3546.3 3723.9 3384.2 5446.0 5332.6 5121.299999999999 True False 4363.740402243936 4401.466580324293 3967.807253183388 3635.8981311017387 3772.6384295100793 3921.5671121565783 4400.484427057637 3863.9207136778323 4212.489695474947 4127.961956348453 3849.539869310488 1.1335745440728606 1.1433747226295552 1.0307224727858406 0.9445020066133213 0.9800232125367796 1.0187106109538726 1.1431195873926179 1.0037357307251165 1.094283950416513 1.0723260692161203 1.0 11.910470297239595 -5.761370034578227 24.999940786629153 1.035827382008063 1.1384746669526 0.3775557392953711 0.05256676683467811 1.5216497603591395 547274.1054877643 0.007872825105673756 0.02707443939191101 1.7323273633135417e-06 5.761370034578227 0.10264728494453701 TQPSSGVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_A549_PD325901_60min_R1 2 TQPSSGVDSAVGTLPATSPQSTSVQAK 27 0 Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 Q13428 TCOF1 Treacle protein 1 TQPSSGVDSAVGTLPAT(0.209)S(0.786)PQS(0.004)T(0.001)SVQAK;TQPSSGVDSAVGTLPAT(0.208)S(0.789)PQS(0.003)TSVQAK 182.74 6.115599999999999e-58 82804000.0 4832.8 4164.5 5393.4 4255.799999999999 5411.9 5388.1 5160.0 4900.8 5825.3 5290.9 6079.700000000001 True False 5323.4222982806805 4515.4570303140235 5759.428557148898 4518.67110037693 5031.786814041446 5344.221100018864 5356.36662366034 4803.049699396777 5580.482899026431 4956.831671049357 5331.935442393664 0.9984033669940382 0.8468701617075283 1.0801759735041578 0.8474729578399329 0.943707377631438 1.0023041647367892 1.0045820474629956 0.9008079244936518 1.0466148660871983 0.929649603713898 1.0 12.38044359744037 -8.7763792371287 24.99548502323742 1.0220125773159725 0.9532694817244292 0.010881674749103953 0.07271227886690514 278.10729808533813 465292.4394403507 0.010828473316353279 0.011550209996804455 1.6734809111673996e-09 8.7763792371287 -0.06874309559154335 TQS(ph)APLPQNAQALQHLVIQQQHQQFLEK ddPTM_A549_MK2206_60min_R1 2 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.164)QS(0.836)APLPQNAQALQHLVIQQQHQQFLEK;T(0.147)QS(0.853)APLPQNAQALQHLVIQQQHQQFLEK 304.79 3.5022999999999995e-203 89293000.0 4828.5 5515.4 4763.5 4735.2 6350.9 4799.7 5160.9 4420.7 6240.6 6806.6 6432.200000000001 True False 5643.432754509014 5796.110301821888 5439.035928212686 5895.324212571208 5416.691022986355 5307.601068216993 6098.568726228349 5047.347762825956 4827.114064190407 5268.984332610995 4834.907220311041 1.1672266906801074 1.1988048658871702 1.12495145829557 1.2193251998312282 1.1203298793886445 1.0977668911453367 1.2613621003126538 1.0439389077876138 0.9983881477419265 1.0897798225530435 1.0 12.239272489962666 -8.451361544899086 5.976330837178244 1.0001983276414947 1.166386415975338 0.6048621248859933 0.051799600816164665 0.07479285494785406 4.847772432840595 0.006754333823751348 0.008142306118156709 3.53702765214526e-09 8.451361544899086 0.16618808833384335 TQS(ph)APLPQNAQALQHLVIQQQHQQFLEK ddPTM_A549_PD325901_60min_R1 1 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.096)QS(0.904)APLPQNAQALQHLVIQQQHQQFLEK 381.22 0.0 103040000.0 6595.4 7165.5 7435.2 8091.5 9900.4 8700.2 8475.7 9935.4 9244.8 9405.2 9585.7 True False 7264.960152723136 7769.361832324437 7939.797383489728 8591.293577870189 9205.030058525821 8629.348455742114 8798.247401581006 9737.230652829481 8856.273205657997 8811.354066898522 8406.719668758813 0.8641848948194738 0.9241847163284229 0.9444584447124759 1.0219555208671096 1.094960986118486 1.0264822422722906 1.046573187670001 1.1582675569657848 1.0534754999110798 1.0481322577751009 1.0 13.037327250324852 -6.031053744573968 1.7440501529524386 1.0423282453195757 0.8838067626295272 0.7017945323259402 0.04256760934791885 0.19994778098039598 1.1309760315839703 0.006994403271604444 0.031788283094235155 9.309926566430168e-07 6.031053744573968 -0.1585214826900485 TQS(ph)ESGDVSR ddPTM_A549_MK2206_60min_R1 2 TQSESGDVSR 10 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 TQS(0.5)ES(0.5)GDVSR;T(0.18)QS(0.779)ES(0.042)GDVSR 138.2 3.2592e-07 22610000.0 744.8199999999999 1157.5 1001.1 1486.9099999999999 2596.1 2449.1 2201.0 3037.2 4272.3 3700.1000000000004 3510.4 True False 870.5274068993272 1216.4118059177647 1143.0710334278822 1851.2030167499258 2214.217129032875 2708.2621364189918 2600.893209794534 3467.7324010349007 3304.6308714611846 2864.244840168944 2638.6707978887257 0.3299113355087192 0.46099415163538016 0.4331995618182023 0.7015664925807058 0.8391411049853329 1.0263736342502248 0.9856830991859922 1.3141966795590911 1.2523846756879684 1.085487754842592 1.0 11.365595655076575 -6.726915411885444 0.9726249158462158 1.1326925360104425 0.35871983811484465 0.9159768505729196 0.09257576468437478 0.14270148372910724 0.2535293581550926 0.019114215811657464 0.06692212396374184 1.875359738811622e-07 6.726915411885444 -0.7739726978955979 down TQS(ph)ESGDVSR ddPTM_A549_PD325901_60min_R1 2 TQSESGDVSR 10 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 TQS(0.971)ES(0.029)GDVSR;TQS(0.587)ES(0.413)GDVSR 158.25 1.2376000000000001e-08 31800000.0 2073.71 2454.3199999999997 2320.2200000000003 2498.8 2721.3 2389.6 2724.5 2409.6000000000004 2656.3 2940.0 2344.1000000000004 True False 2284.231512615385 2661.1541598367894 2477.684081816298 2653.145200813448 2530.165275975347 2370.139889869354 2828.182338403607 2361.538637705369 2544.6649485320754 2754.3678982564616 2055.7905604741986 1.111120732108281 1.2944675449929854 1.2052220345076317 1.2905717400518955 1.2307505076741507 1.1529092191777777 1.3757152079496098 1.1487253045663588 1.2378035960750353 1.3398095852824257 1.0 11.005477578008913 -10.687644914056765 0.6483810445767292 0.9742000639296742 1.234535822546732 0.0 0.12355833131013383 0.4995011165204975 0.3154889701892524 0.07365275399452269 0.013417399991266964 2.0528399268033285e-11 10.687644914056765 0.2603357586170578 TQS(ph)GNFYTDTLGMAEFR ddPTM_A549_PD325901_60min_R1 2 TQSGNFYTDTLGMAEFR 17 0 E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30;H0YDJ2 E9PP16 PPFIBP2 Liprin-beta-2 1 T(0.116)QS(0.878)GNFY(0.003)T(0.002)DT(0.001)LGMAEFR;T(0.095)QS(0.873)GNFYT(0.031)DTLGMAEFR 102.08 5.6209e-09 12916000.0 1947.0 1931.9 2897.4 2863.3 2885.7 2504.0 3277.3 3257.3 2635.1 3567.9 3017.2 True False 2144.6580066943557 2094.707993003639 3094.03498748159 3040.1595379738865 2683.0183871245576 2483.608254198554 3402.0194449073747 3192.330596197585 2524.3559108070913 3342.6221850983757 2646.103527606652 0.8104966356453016 0.7916198180266442 1.1692796427659364 1.148919347355865 1.013950648239109 0.9385907347491155 1.2856713312288404 1.2064269454661074 0.9539898512929013 1.2632242655001904 1.0 11.369653792175455 -5.740292440343709 24.739587757901493 1.0342315360598342 0.8010579271793294 0.35088650928373755 0.1328188778510403 183.8162235169381 215040.8039758027 0.01727474389720582 0.0667622900577454 1.8184759413269178e-06 5.740292440343709 -0.23317360888050476 TQS(ph)LPVTEK ddPTM_A549_MK2206_60min_R1 2 TQSLPVTEK 9 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 TQS(0.924)LPVT(0.075)EK;T(0.002)QS(0.774)LPVT(0.224)EK 123.62 9.796200000000001e-05 23464000.0 10690.7 11375.0 9015.6 8326.7 11218.7 8186.9 7145.5 7095.0 10438.4 11409.2 12518.0 True False 12495.028797479457 11953.938913446713 10294.147646561203 10366.741873799767 9568.444091322026 9053.232323975602 8443.744857149857 8100.737977526221 8074.119066699536 8831.853795966472 9409.435120775724 1.3279254957495634 1.270420462016132 1.0940239785310877 1.1017390247912269 1.0168988859060428 0.9621440828032665 0.8973700066762079 0.8609165028026026 0.8580875433076898 0.9386167907642009 1.0 13.199892400504625 -5.958863076574936 0.7372014604332255 0.9231519884015823 1.4040172729614628 0.9026099619925518 0.04662796792174291 0.38075540154796295 0.2466181955000369 0.010516362515237692 0.12396588814321825 1.0993523862432993e-06 5.958863076574936 0.48086528455988053 TQS(ph)LSALPK ddPTM_A549_MK2206_60min_R1 1 TQSLSALPK 9 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 T(0.003)QS(0.913)LS(0.085)ALPK 168.05 2.2274999999999998e-07 43089000.0 6815.8 7221.5 7657.1 5935.7 9149.7 6591.4 6631.9 7224.2 9936.8 8911.0 10471.0 True False 7966.1404096888355 7589.0435044796 8742.991918949792 7389.946766463695 7803.791250534299 7288.897572982787 7836.830385295934 8248.252473184624 7686.130665808936 6897.998911041724 7870.761715101656 1.0121181021659158 0.9642069953557961 1.1108190332041923 0.9389112558552726 0.9914912346490099 0.926072702594662 0.9956889395164108 1.047961146804721 0.9765421625027134 0.8764080480046182 1.0 12.942287548021577 TQS(ph)PEFEAQSSK ddPTM_A549_MK2206_60min_R1 2 TQSPEFEAQSSK 12 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 T(0.002)QS(0.998)PEFEAQSSK;TQS(1)PEFEAQSSK 218.2 5.1948e-32 29775000.0 10769.8 11043.900000000001 10428.0 9950.400000000001 13299.2 11586.8 10123.6 12127.8 14763.2 14254.2 14534.6 True False 12587.478943670121 11605.987337689161 11906.84720466083 12388.248446690435 11342.905297343716 12812.90748530464 11962.927077999057 13846.9527898298 11419.358771985999 11034.16632002816 10925.257685447097 1.1521448103175793 1.0623078806780755 1.089845891737753 1.133909039343951 1.0382277126930326 1.17277851508912 1.0949789398500118 1.2674257384587388 1.0452255773515589 1.0099685186122551 1.0 13.415379687388127 -8.97975825628863 24.142802509686636 1.0199522938240753 1.1231110898588015 0.4092729231305309 0.05842719060280871 66.45179130377784 79260.02280445487 0.010010229465129698 0.010221408189303633 1.0477115791911891e-09 8.97975825628863 0.10315879603472622 TQS(ph)PEFEAQSSK ddPTM_A549_PD325901_60min_R1 2 TQSPEFEAQSSK 12 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 TQS(1)PEFEAQSSK;T(0.005)QS(0.995)PEFEAQSSK 227.74 2.7519e-40 45491000.0 16156.6 16843.0 16546.1 17182.1 20785.3 16317.9 15988.5 16983.2 17715.8 18396.0 18509.5 True False 17796.806138139716 18262.418720513644 17669.017845782135 18243.39929361963 19325.41223339227 16185.012432582493 16596.95111674291 16644.456752937334 16971.266534354017 17234.473420518996 16232.948841387823 1.0963384602534232 1.125021639565046 1.088466305070394 1.1238499838739051 1.1905053371522891 0.9970469685284099 1.0224236692243507 1.0253501637669382 1.045482660000983 1.0616970206040242 1.0 13.986637480015233 -7.277462999970602 24.996947524885424 1.0208525842978928 1.122771285932404 0.7333061716522026 0.02980055409768109 299.41611412000674 467089.86072430084 0.004348295970660506 0.0069650316233980485 5.278821781660669e-08 7.277462999970602 0.10191870163451111 TQS(ph)PGGCSAEAVLAR ddPTM_A549_MK2206_60min_R1 1 TQSPGGCSAEAVLAR 15 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ESM2 HEXIM2 Protein HEXIM2 1 T(0.019)QS(0.981)PGGCSAEAVLAR 161.35 1.0202e-19 27106000.0 2849.4 2925.5 2781.9 2886.7 2639.2 3043.5 2607.8 3188.5 4657.0 4223.0 4149.4 True False 3330.309058858441 3074.3954541791945 3176.415251116797 3593.9416295888873 2250.9771761270986 3365.5611498882067 3081.6035040900424 3640.47963937172 3602.1969357008516 3269.0213669991235 3118.9894623859054 1.06775258429725 0.9857024178040672 1.018411664875252 1.152277579944006 0.7217007954894431 1.0790549921620074 0.9880134387285604 1.167198441442279 1.1549243686592359 1.0481027289199143 1.0 11.606862963187144 -8.212411764953476 24.94955328160501 1.082255898441369 0.9998418190814884 0.133860992214914 0.10979269120549724 660.9944113861533 336372.4299142939 0.01798250582638158 0.023215309991738115 6.131803585534281e-09 8.212411764953476 -0.08241407935988065 TQS(ph)PGGCSAEAVLAR ddPTM_A549_PD325901_60min_R1 1 TQSPGGCSAEAVLAR 15 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ESM2 HEXIM2 Protein HEXIM2 1 T(0.113)QS(0.887)PGGCSAEAVLAR 186.36 2.1794e-33 42896000.0 5708.9 7454.5 7630.5 7324.9 7115.0 7367.0 7354.0 7785.9 6676.4 6649.2 7715.3 True False 6288.463325329943 8082.716876570028 8148.351615924029 7777.342436945109 6615.266945417479 7307.005594521069 7633.860494263206 7630.604116579605 6395.814125806405 6229.3683772404265 6766.367011316317 0.9293707117590413 1.1945430779991981 1.2042432227362825 1.149411851875312 0.9776689520911099 1.0799008659005 1.128206684842259 1.1277254254488276 0.9452360646577128 0.920637081438563 1.0 12.724165716456412 -8.760163587557642 24.99999270092 0.9741392487914977 1.1035729074804757 0.37526257186123513 0.08136712874511685 27.509459783987193 539065.296353953 0.013643015097193846 0.01505497536179339 1.7371463671551357e-09 8.760163587557642 0.12943365868897794 TQS(ph)SLTVSEVLTR ddPTM_A549_PD325901_60min_R1 2 TQSSLTVSEVLTR 13 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 T(0.008)QS(0.477)S(0.477)LT(0.037)VSEVLTR;TQS(0.885)S(0.114)LT(0.001)VSEVLTR 168.67 1.3539000000000001e-21 31575000.0 5716.5 6167.0 5936.9 6126.9 6786.5 6370.5 6151.6 6163.9 5671.9 7283.2 6739.8 True False 6296.834871735119 6686.7147330883845 6339.813735479901 6505.344697800513 6309.8396521540035 6318.620760132544 6385.7025042846835 6040.956179013994 5433.529767563562 6823.337509041314 5910.847327112328 1.065301558856429 1.1312616217335285 1.0725727437418249 1.100577351737931 1.0675017138763756 1.0689873059569328 1.08033622776793 1.0220118782809486 0.9192471851946896 1.1543755288253692 1.0 12.529149241968454 -8.46540603601943 3.3563584281743317 0.9619362775056034 1.0844384304758337 0.0 0.06332147200772024 0.09053819620265105 2.030879818781443 0.005621424872260142 0.006718643742245268 3.4244747156757655e-09 8.46540603601943 0.12250215297023026 TQSAS(ph)PPPK ddPTM_A549_MK2206_60min_R1 1 TQSASPPPK 9 0 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 T(0.001)QS(0.006)AS(0.993)PPPK 72.652 0.0025533 5187100.0 1464.4 1559.4 1479.3 1631.3 1489.3 1457.7 1450.4 1351.5 1713.6 2015.2 2160.4 True False 1711.55491885741 1638.7667992640706 1689.0869840673927 2030.9685732318394 1270.225942863781 1611.9528464570528 1713.9189057183046 1543.0792637951627 1325.472336056898 1559.9649203828155 1623.9130559932798 1.053969553690498 1.0091468833358848 1.0401338777550801 1.2506633687907514 0.7822007084528529 0.9926349446529258 1.0554252885601514 0.9502228324972272 0.8162212448289985 0.9606209609717375 1.0 10.665258677625374 -6.768177448852994 24.999972346761883 0.923686871887861 1.0793587020786009 0.36793451086088147 0.09440065203336442 139.2041970702478 516485.41235306615 0.01509690261811756 0.028995533463451077 1.7053854413439597e-07 6.768177448852994 0.15567183019073982 TQSAS(ph)PPPKER ddPTM_A549_MK2206_60min_R1 3 TQSASPPPKER 11 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 TQS(0.004)AS(0.996)PPPKER;TQS(0.01)AS(0.99)PPPKER;TQS(0.091)AS(0.909)PPPKER 99.48100000000001 7.6186e-05 210488000.0 12839.0 14230.4 13527.699999999999 12773.099999999999 18350.699999999997 13152.400000000001 11990.8 11987.8 19743.6 20143.5 20560.699999999997 True False 15005.909316587178 14954.66657704721 15446.131274500409 15902.51007340625 15651.3363390253 14544.178238143471 14169.373148570783 13687.107361097793 15271.706124050526 15593.069359731677 15454.910743547951 0.9709476531821305 0.9676320248753568 0.999431930135785 1.028961625032041 1.0127095910637562 0.9410716425014174 0.91682012168761 0.8856154259455576 0.9881458636327675 1.0089394638685574 1.0 13.915777701800417 -8.97898559639405 24.998350286515336 0.9947702768484784 0.9659362053407633 0.12604577232882197 0.03933548797801546 282.2988794518624 335821.7866447809 0.00771476044488489 0.007892501197076632 1.0495772378587186e-09 8.97898559639405 -0.02883407150771511 TQSAS(ph)PPPKER ddPTM_A549_PD325901_60min_R1 2 TQSASPPPKER 11 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 TQS(0.002)AS(0.998)PPPKER;TQS(0.061)AS(0.939)PPPKER 107.11 4.0371e-05 320100000.0 10652.2 11247.0 12446.4 11634.5 13274.7 13709.5 12986.0 12196.099999999999 13042.7 12542.099999999999 13543.1 True False 11733.603502264825 12194.824161349938 13291.087550283311 12353.136641133373 12342.330867228882 13597.854377370239 13480.18933621186 11952.839217844636 12494.560676211018 11750.189665551829 11877.384556784316 0.9878945525564073 1.0267263893871568 1.1190247723933038 1.040055290125073 1.0391455129049425 1.144852582010843 1.1349459362677643 1.0063528010480405 1.0519622915698366 0.9892910016827035 1.0 13.535929563973292 -9.999983692548044 0.7051507793170398 1.0029492767623525 1.0655629607204211 0.21217619545953537 0.04911284451209236 0.8593341336778307 0.8575860236038377 0.02627618821188259 0.01086349147492674 1.000037550000762e-10 9.999983692548044 0.06261368395806866 TQSLNPAPFSPLT(ph)AQQMKPEKPSTLQRPQETVIR ddPTM_A549_PD325901_60min_R1 1 TQSLNPAPFSPLTAQQMKPEKPSTLQRPQETVIR 34 3 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 TQSLNPAPFS(0.426)PLT(0.53)AQQMKPEKPS(0.014)T(0.014)LQRPQET(0.015)VIR 40.535 0.014318 3859300.0 824.85 850.19 864.33 870.01 1164.6 1486.1 1049.0 1207.1 1301.1 1104.3 953.37 True False 908.5881647775234 921.8384950420643 922.9886314385183 923.7485417639301 1082.8025136518909 1473.9976943148852 1088.9202690348259 1183.0234435483687 1246.4192916971297 1034.5743095389835 836.111533910365 1.0866829698284346 1.1025305328952557 1.103906110614026 1.1048149730021068 1.295045540859591 1.7629199389478873 1.302362453896687 1.4149110442425668 1.4907332827569288 1.2373639970022166 1.0 9.707551594624618 -6.761640034379864 7.627190213923495 1.300868662941567 1.0995712059243927 0.2916528808676486 0.18022953495586364 0.19930498124717339 78.3105664495715 0.034105033140970534 0.06785306021301533 1.7312507144004365e-07 6.761640034379864 -0.20129745701717439 TQSLPVT(ph)EK ddPTM_A549_PD325901_60min_R1 2 TQSLPVTEK 9 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.11)QS(0.411)LPVT(0.478)EK;T(0.007)QS(0.247)LPVT(0.746)EK 131.83 5.1251e-05 37876000.0 9571.7 11514.7 10496.400000000001 8845.2 12583.2 11889.3 13149.6 10818.9 11247.900000000001 10399.5 12009.7 True False 10543.41193768689 12485.084179843172 11208.748823980735 9391.547915093293 11699.399441683376 11792.477482684846 13650.015223737228 10603.108552237132 10775.189878625895 9742.873795210231 10532.583035760843 1.0010281335441913 1.1853772372316538 1.0641975274179312 0.8916661642454239 1.1107816004830808 1.1196187528402421 1.2959798348982292 1.0066959373818214 1.0230339359339813 0.9250222630223427 1.0 13.36257166927427 TQSLS(ph)ALPK ddPTM_A549_MK2206_60min_R1 1 TQSLSALPK 9 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 T(0.026)QS(0.469)LS(0.505)ALPK 158.06 1.1185e-05 46243000.0 12182.0 13571.0 13419.0 11074.0 16640.0 12618.0 10239.0 12409.0 19580.0 17072.0 17058.0 True False 14238.023778695006 14261.705933572335 15322.015979990765 13787.130497130745 14192.278042874708 13953.228384849479 12099.29376423727 14168.013750968694 15145.161262835001 13215.423342981065 12822.027823150038 1.110434634449038 1.1122816242703024 1.19497603587531 1.0752691140038102 1.106866888656309 1.0882232184566836 0.9436334042570179 1.1049744975118907 1.1811829978632997 1.0306812249401578 1.0 13.646336823959428 -11.098306104635457 1.4468335386497824 1.0002458176849942 1.1100772381787538 0.21322689889472213 0.062068699154602454 0.4569359826631898 1.715883952483422 0.04787037989551685 0.010547247694442917 7.974324332706748e-12 11.098306104635457 0.1098314204937596 TQSLS(ph)ALPK ddPTM_A549_PD325901_60min_R1 1 TQSLSALPK 9 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 T(0.038)QS(0.281)LS(0.681)ALPK 145.23 3.2365e-05 54756000.0 5710.8 5546.5 5873.8 5501.3 7596.6 7348.4 8721.3 12953.0 14338.0 16036.0 15593.0 True False 6290.556211931241 6013.923020443445 6272.431390028774 5841.102806641198 7063.041022847284 7288.557066754257 9053.193843978477 12694.642253568085 13735.423721738092 15023.484223279122 13675.159852171053 0.45999873346508335 0.4397698517205034 0.45867335064701054 0.4271323238473056 0.5164869075900391 0.5329778332058863 0.6620174054156451 0.9282993684020957 1.0044068128064676 1.0985966076947913 1.0 13.739270076668676 -8.089992465737305 1.4934790312617259 1.0054326648916365 0.45807009084990447 0.9801676841130859 0.035829069599712215 0.022418320379785344 0.09890794387072238 0.004025268339043146 0.005576051381690658 8.128446174985893e-09 8.089992465737305 -0.547362574041732 down TQSPHS(ph)PKEESER ddPTM_A549_PD325901_60min_R1 1 TQSPHSPKEESER 13 1 Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.008)QS(0.034)PHS(0.918)PKEES(0.04)ER 41.412 0.040359 8456700.0 1120.7 1105.9 1383.8 1296.0 1241.2 1627.8 1243.9 1556.1 1250.0 1324.2 1600.6 True False 1234.4726389842651 1199.098074156387 1477.7129894653924 1376.0509765704453 1154.0223939075452 1614.5437364953705 1291.237295188198 1525.0623647631658 1197.466846992092 1240.5897860106145 1403.7363470393766 0.8794191598642395 0.8542188685826988 1.0526998125980283 0.9802773715111655 0.822107653151175 1.1501759143735277 0.9198574204561629 1.0864307731146794 0.8530568076531408 0.8837769205215389 1.0 10.45505627547719 -5.698917742651278 24.999995319342858 0.9558092484939172 0.8668181744277692 0.1337144023569946 0.09630097909418014 112.13444744422968 44835.77410746552 0.012976370104320022 0.0502572545725556 2.0002406884340063e-06 5.698917742651278 -0.08899107406614803 TQSRPGGPPNPPGPS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TQSRPGGPPNPPGPSPK 17 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 TQSRPGGPPNPPGPS(1)PK;T(0.004)QS(0.004)RPGGPPNPPGPS(0.992)PK 57.537 0.0021252 28215000.0 3551.0 3988.8999999999996 3550.2999999999997 3143.6000000000004 4485.2 3230.9 3210.3999999999996 3237.3 5452.3 5255.4 5920.7 True False 4150.3219863853155 4191.917972030556 4053.785925461005 3913.7821411215677 3825.433021508512 3572.7916935021544 3793.688123909299 3696.1971888154517 4217.36275553398 4068.2014899661804 4450.426786992874 0.9325671862562337 0.9419137023626915 0.9108757697820983 0.8794172623084731 0.8595654314972639 0.8027975438095607 0.852432430749562 0.8305264563880062 0.9476310829019672 0.9141149118228813 1.0 12.119727978933003 -8.985981741621284 3.366004435271564 0.9789279308403609 0.8760107045087285 0.3447063700132714 0.04495715739842092 0.13943509460982978 3.192736564401903 0.008581236624753899 0.008741061983806295 1.0328048254824377e-09 8.985981741621284 -0.10291722633163236 TQSRPGGPPNPPGPS(ph)PK ddPTM_A549_PD325901_60min_R1 1 TQSRPGGPPNPPGPSPK 17 1 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2 B9EGQ5 WIZ Protein Wiz 1 T(0.001)QS(0.001)RPGGPPNPPGPS(0.998)PK 47.472 0.0067077 25411000.0 2878.5 2687.9 2605.7 2741.0 3569.8 3070.3 2625.6 3205.8 3117.2 2720.1 2635.4 True False 3170.7232009602994 2914.418766185871 2782.5384713469953 2910.3053447373377 3319.0695631414387 3045.296494754719 2725.518644783448 3141.857804098551 2986.1949243550016 2548.3524217848308 2311.2625071770417 1.3718576713438737 1.2609639784039588 1.2039041271627628 1.25918424917123 1.4360417965656895 1.317590055347811 1.1792337029307742 1.3593686542927534 1.292018935574011 1.1025802624632928 1.0 11.174465411319561 -10.596150344620362 0.6715612846720268 0.9768163436439438 1.2989160123721275 0.5966371541271827 0.07641213020223518 0.3850996996594797 0.2776617819710686 0.07007732941607968 0.01479801001721882 2.53425116830869e-11 10.596150344620362 0.32209966872818374 TQSSS(ph)CEDLPSTTQPK ddPTM_A549_MK2206_60min_R1 2 TQSSSCEDLPSTTQPK 16 0 A0A2R8Y6F8;A0A2R8YFN5;Q5JS72;A0A2U3TZM4;O14936-5;O14936-3;O14936-4 A0A2R8Y6F8 CASK Peripheral plasma membrane protein CASK 1 TQSS(0.033)S(0.967)CEDLPSTTQPK;TQS(0.003)S(0.025)S(0.972)CEDLPSTTQPK 220.97 8.517e-48 58655000.0 9751.8 10092.7 8354.599999999999 8216.1 12257.8 10715.2 9449.2 8800.5 14789.599999999999 13602.4 12294.0 True False 11397.665431380547 10606.37532059285 9539.40790717869 10229.044868834744 10454.693857809478 11849.075351825897 11165.997327574056 10047.997825400913 11439.779214138127 10529.608392722912 9241.06050286121 1.2333720169726852 1.147744386838384 1.0322849746763485 1.106912444266287 1.1313305279813397 1.2822202980012083 1.2083025886603436 1.0873208569827955 1.2379292626204699 1.1394372311990322 1.0 13.173842709293147 -10.969301651095785 1.2111499024968986 0.9991554176924946 1.1664188203951573 0.08306656352033548 0.08063527283198291 0.3890801085759328 1.0064435737974502 0.054384037512049024 0.012304330325141274 1.073243702663829e-11 10.969301651095785 0.1672634027026627 TQSSS(ph)CEDLPSTTQPK ddPTM_A549_PD325901_60min_R1 2 TQSSSCEDLPSTTQPK 16 0 A0A2R8Y6F8;A0A2R8YFN5;Q5JS72;A0A2U3TZM4;O14936-5;O14936-3;O14936-4 A0A2R8Y6F8 CASK Peripheral plasma membrane protein CASK 1 TQS(0.001)S(0.181)S(0.818)CEDLPSTTQPK;TQSS(0.033)S(0.967)CEDLPSTTQPK 228.2 5.1136e-55 104427000.0 29521.0 28719.0 32351.0 28317.0 32457.0 31889.0 32837.0 34777.0 28597.0 32247.0 36315.0 True False 32517.95018778841 31139.250919339254 34546.53340236658 30066.076777426944 30177.332290571365 31629.306556764244 34086.63000409586 34083.3454529713 27395.16753874631 30210.91891669254 31848.485219751947 1.021020307980653 0.9777309879726137 1.0847151179718069 0.9440347498467657 0.9475280247192366 0.9931180820225707 1.0702747640555241 1.0701716335266496 0.8601717585537237 0.948582600027589 1.0 14.95893713608373 -8.75459551844024 24.999928279670986 0.9339699966313256 1.011439418153735 0.28564877203750716 0.05434893185418355 179.34057825850903 655111.6482207718 0.011333571684790895 0.012711889542957593 1.7595616244240502e-09 8.75459551844024 0.07746942152240932 TQSSSCERDS(ph)PSTSR ddPTM_A549_MK2206_60min_R1 1 TQSSSCERDSPSTSR 15 1 A0A2R8YEK3;Q5JS79;A0A2U3TZM1;A0A2R8YE77;O14936-6;O14936-2;O14936 A0A2R8YEK3 CASK Peripheral plasma membrane protein CASK 1 T(0.003)QS(0.003)S(0.003)S(0.019)CERDS(0.874)PS(0.043)T(0.05)S(0.006)R 47.397 0.0080757 114390000.0 135.61 401.81 211.83 186.1 415.8 138.65 315.69 265.39 256.28 376.2 404.86 True False 158.49765265381953 422.2604127307271 241.87067926383813 231.69450835434648 354.63637080692956 153.32185097157873 373.0467866424516 303.0098452227882 198.23298919506414 291.21615871775265 304.3220884324379 0.5208220457155786 1.3875444102851329 0.7947851584146035 0.7613463404769734 1.1653323379635714 0.5038144019099602 1.225828820260844 0.9956879790868647 0.6513920504954525 0.9569340175660799 1.0 8.249455241719327 TQSSSCERDS(ph)PSTSR ddPTM_A549_PD325901_60min_R1 2 TQSSSCERDSPSTSR 15 1 A0A2R8YEK3;Q5JS79;A0A2U3TZM1;A0A2R8YE77;O14936-6;O14936-2;O14936 A0A2R8YEK3 CASK Peripheral plasma membrane protein CASK 1 TQS(0.001)S(0.004)S(0.043)CERDS(0.892)PS(0.027)T(0.027)S(0.005)R;T(0.001)QS(0.002)S(0.002)S(0.011)CERDS(0.724)PS(0.146)T(0.09)S(0.025)R 70.529 0.0015262000000000001 161139000.0 605.3 516.23 603.4200000000001 583.97 430.64 597.02 598.84 432.65 363.42999999999995 440.47 601.5500000000001 True False 666.7496104016911 559.7345138093427 644.3717098592331 620.0405006079039 400.3933320273483 592.1580670613498 621.6291838978216 424.02045634264107 348.1563009618691 412.6586490289196 527.563163539633 1.2638289715457016 1.0609810397940964 1.2214114904002862 1.175291497700111 0.7589486144956534 1.1224401322645874 1.178302858992394 0.8037340088298008 0.6599329237203536 0.7821976164147382 1.0 9.043200023443026 -8.267526491820874 24.79135233918339 0.8322498614203755 1.1031802546483709 0.49417125177506327 0.14536125684553647 364.9731061968272 1486445.952080187 0.028141364101983975 0.0344665709083048 5.400991678877736e-09 8.267526491820874 0.2709303932279954 TQSVRS(ph)PTPYKK ddPTM_A549_MK2206_60min_R1 2 TQSVRSPTPYKK 12 2 Q9Y2I7;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4;F8WEZ0;C9JL08;E9PDH4 Q9Y2I7;E9PDH4 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 T(0.106)QS(0.154)VRS(0.695)PT(0.045)PYKK;T(0.021)QS(0.017)VRS(0.886)PT(0.072)PY(0.004)KK 55.815 0.0036311 30499000.0 7703.7 8424.7 8001.0 7364.5 10440.9 8355.0 7299.2 8167.5 13274.2 13114.8 12092.0 True False 9003.896222618012 8853.481245196883 9135.662110135341 9168.802830604965 8905.05744097659 9239.120554399851 8625.370157624828 9325.268136919713 10267.6148945416 10152.157571375827 9089.222677777603 0.9906123484719758 0.9740636310784762 1.0051092853596026 1.0087554409929826 0.9797380652526776 1.0164918257519133 0.948966755838554 1.0259698180482717 1.1296471941044055 1.1169445321432174 1.0 13.149941203188453 -8.523132358629434 24.999729766065922 1.0620952463705096 0.9903681002662728 0.5359936422295439 0.0366287760969317 7.842966968205221 773066.5886249654 0.008015347546202773 0.009132623316954818 2.9982486124743907e-09 8.523132358629434 -0.0717271461042368 TQSVRS(ph)PTPYKK ddPTM_A549_PD325901_60min_R1 3 TQSVRSPTPYKK 12 2 Q9Y2I7;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4;F8WEZ0;C9JL08;E9PDH4 Q9Y2I7;E9PDH4 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 T(0.191)QS(0.155)VRS(0.574)PT(0.077)PY(0.003)KK;T(0.018)QS(0.015)VRS(0.955)PT(0.011)PYKK;T(0.027)QS(0.072)VRS(0.776)PT(0.114)PY(0.011)KK 53.328 0.004713899999999999 40610900.0 9743.9 9045.4 9492.5 8265.3 11245.0 11675.8 10414.9 11213.599999999999 12282.8 9900.2 11351.0 True False 10733.093554919944 9807.687602834058 10136.718133039618 8775.828809141745 10455.18999314401 11580.71615589916 10811.244718751956 10989.935951100979 11766.596630587583 9275.099682421302 9954.898959917513 1.0781720234565675 0.9852121696386685 1.0182642911650015 0.8815588028042087 1.0502557620364479 1.1633183021272089 1.0860225465152826 1.103972626477772 1.181990563436626 0.9317120866587033 1.0 13.28119095763793 -6.99447086501318 24.971949209427688 1.0947867986918145 0.9890570480480652 0.19425147685225852 0.07885853370622366 149.2390280758603 674018.3165392197 0.011239385988325848 0.021196279560310737 1.0128126918713446e-07 6.99447086501318 -0.10572975064374934 TQT(ph)PPLGQTPQLGLK ddPTM_A549_MK2206_60min_R1 2 TQTPPLGQTPQLGLK 15 0 H0Y3P2;D3DQV9;P78344-2;P78344;E9PKF8 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 TQT(1)PPLGQTPQLGLK;TQT(1)PPLGQTPQLGLK 256.67 6.917499999999998e-77 341870000.0 21457.3 24277.0 23479.0 22370.5 34610.0 28127.0 27495.0 25711.0 38777.0 37875.0 39599.0 True False 25078.767659382058 25512.5956045491 26808.675251077046 27851.2735042499 29518.914847589753 31103.38047080846 32490.485598955325 29355.612986635177 29994.071414144702 29319.0111946701 29765.475423198415 0.8425455096153558 0.8571203799642745 0.9006634320439271 0.9356905310016773 0.9917165584589823 1.0449482169724498 1.0915493583426223 0.9862302741435871 1.0076799039053186 0.9850006014625806 1.0 14.861352317262124 -6.372971892563554 1.4418647843023071 1.01220501253516 0.8499211449144053 0.8322354486991459 0.029889381994616677 0.132789323529382 0.5192233780227311 0.004645775581703336 0.016825480439455365 4.236703850096575e-07 6.372971892563554 -0.16228386762075475 TQT(ph)PPLGQTPQLGLK ddPTM_A549_PD325901_60min_R1 2 TQTPPLGQTPQLGLK 15 0 H0Y3P2;D3DQV9;P78344-2;P78344;E9PKF8 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 T(0.046)QT(0.954)PPLGQTPQLGLK;TQT(1)PPLGQTPQLGLK 277.44 4.916799999999999e-106 488040000.0 44971.0 46265.0 47601.0 42669.0 56432.0 51090.0 47305.0 48045.0 48356.0 45764.0 54733.0 True False 49536.42281409958 50163.913917031634 50831.49010806626 45304.56722167001 52468.41099983126 50673.9399788355 49105.21766128924 47086.70478442666 46323.7654825197 42874.45322986688 48001.1879810735 1.0319832674481184 1.045055675222265 1.0589631683305156 0.9438217912342765 1.093064842905954 1.0556809552050221 1.0230000490956819 0.9809487382477408 0.9650545628325867 0.8931956693815984 1.0 15.550782491074798 -8.160838825492755 3.896257934326349 0.9828260356314145 1.0376302745721175 0.3738516155002045 0.04413383676698279 0.20254026161333533 5.573948105570949 0.005628079027245802 0.007331540942831003 6.90496011806773e-09 8.160838825492755 0.054804238940703076 TQT(ph)PPVEENVTQK ddPTM_A549_MK2206_60min_R1 2 TQTPPVEENVTQK 13 0 Q6P1Q9-2;Q6P1Q9 Q6P1Q9-2 METTL2B Methyltransferase-like protein 2B 1 T(0.008)QT(0.992)PPVEENVTQK;T(0.01)QT(0.99)PPVEENVTQK 125.28 3.1185000000000003e-06 14109400.0 3586.1000000000004 4280.799999999999 3457.9 3767.0 4633.1 4136.299999999999 4083.7999999999997 3833.5 6065.9 6382.9 6189.8 True False 4191.3460082727115 4498.67443522485 3948.2822160526157 4689.915169107054 3951.577127430457 4574.000520546271 4825.773598436579 4376.910364601378 4691.98333525183 4940.998456883425 4652.7018302107 0.9008413092491044 0.9668950642859323 0.848599880270818 1.0079982213033127 0.8493080518876723 0.9830848155466553 1.0371981215521051 0.9407244487883222 1.0084427299394234 1.061963271491152 1.0 12.18385301917616 -7.499811084141999 24.024984317001095 1.0010161804807014 0.918840666444747 0.43601533650583124 0.051403735327690346 317.01644915102264 330172.83727910713 0.006270422161598194 0.009978742397271638 3.1636535338556185e-08 7.499811084141999 -0.08217551403595436 TQT(ph)PPVEENVTQK ddPTM_A549_PD325901_60min_R1 1 TQTPPVEENVTQK 13 0 Q6P1Q9-2;Q6P1Q9 Q6P1Q9-2 METTL2B Methyltransferase-like protein 2B 1 T(0.118)QT(0.882)PPVEENVTQK 103.34 0.00013125 11272000.0 3404.2 3906.4 3335.7 4054.6 4452.2 3395.5 3697.1 3106.8 4438.5 4194.2 5918.4 True False 3749.7918779604106 4235.6060375119905 3562.0806611936005 4305.043433335286 4139.492831256179 3367.8481737744364 3837.7951636307475 3044.832436762551 4251.965280299522 3929.3774962133502 5190.474319828715 0.7224372276798304 0.816034484812125 0.6862726682965553 0.8294123365352383 0.7975172549149191 0.6488517168669038 0.739391995249751 0.5866193047388066 0.8191862666685608 0.7570363042164168 1.0 12.341650666712907 -9.792507996888759 0.9352237700126806 0.9746681915391553 0.7356765149199137 0.11977567814341417 0.09799094969860883 0.22644163685927496 0.40938965772528596 0.025754030941438074 0.015115707465141945 1.6124713357962738e-10 9.792507996888759 -0.2389916766192416 TQT(ph)PPVS(ph)PAPQPTEER ddPTM_A549_MK2206_60min_R1 2 TQTPPVSPAPQPTEER 16 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 T(0.163)QT(0.838)PPVS(0.998)PAPQPTEER;T(0.005)QT(0.995)PPVS(1)PAPQPTEER 168.64 1.0389000000000002e-27 108963900.0 2995.26 2997.8999999999996 2325.4 2376.24 3945.0200000000004 2608.4500000000003 2016.1100000000001 3360.9 3451.5 3014.11 3303.12 True False 3500.7866609238213 3150.480304933793 2655.1766867777433 2958.4189066734675 3364.7127839363957 2884.474447651025 2382.4110900494575 3837.317867324576 2669.7407609129223 2333.2204576096906 2482.864142525699 1.4099791450379713 1.2688895260007902 1.0694007139982935 1.191534750533716 1.355173940573983 1.1617528314363534 0.9595414623153502 1.5455206757390503 1.0752665501049616 0.939729410742634 1.0 11.277789606882948 -8.976846184862316 24.99956547521457 1.0332056282056388 1.2347643665624095 0.3210888752267739 0.1546448658497731 152.0134808908397 164133.380044262 0.025706275259443134 0.02649581070625854 1.054760397312298e-09 8.976846184862316 0.20155873835677074 TQT(ph)PPVS(ph)PAPQPTEER ddPTM_A549_PD325901_60min_R1 2 TQTPPVSPAPQPTEER 16 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 T(0.01)QT(0.99)PPVS(1)PAPQPTEER;T(0.068)QT(0.932)PPVS(0.982)PAPQPT(0.018)EER 124.84 5.2703e-08 168021000.0 1771.91 1378.7800000000002 1569.76 1718.26 2134.6 1983.15 1469.46 2137.62 2237.1 2544.8 2471.2 True False 1951.7929987887997 1494.9746294288302 1676.293353333713 1824.3930177484058 1984.6730599702255 1966.9998839112882 1525.3811044193656 2094.983492169552 2143.082466724808 2384.120893701717 2167.258066227482 0.9005817208405922 0.6898000070804273 0.7734627359129479 0.8417977748834052 0.9157529926396446 0.9075983679854147 0.7038299352483559 0.9666516068463701 0.9888450757759754 1.1000632231360086 1.0 11.08165523721655 -8.420308871877484 7.128224159981365 0.9938772531008092 0.8204608193060848 0.5855095349123873 0.0785151695309808 0.14189559924366962 8.677609502896535 0.011697095176322739 0.014136959680088117 3.799191003136648e-09 8.420308871877484 -0.17341643379472438 TQT(ph)PPVS(ph)PAPQPTEERLPSSPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 T(0.119)QT(0.88)PPVS(0.502)PAPQPT(0.197)EERLPS(0.141)S(0.161)PVYEDAASFK 117.66 6.9507e-21 39572000.0 4712.0 6901.9 6753.0 5365.4 8504.0 5436.3 4739.9 4569.7 8712.3 9812.3 9554.0 True False 5507.27040266055 7253.177229601566 7710.676944099979 6679.9232408619555 7253.072865180685 6011.565657676114 5601.078475740623 5217.468969119317 6738.977960684239 7595.694615061688 7181.478123014159 0.7668714306894077 1.0099838926414935 1.0736894009869529 0.9301599373331108 1.0099693601985766 0.8370930823295445 0.7799339327917882 0.7265174215875043 0.938383135790408 1.0576784451546413 1.0 12.810065101032011 -4.4249786925868815 18.511716825234245 0.936189688937824 0.924501895751002 0.0 0.11890973239689938 0.0 0.0 0.015496573636315911 0.0 3.7585584412506025e-05 4.4249786925868815 -0.011687793186822004 TQT(ph)PPVSPAPQPTEER ddPTM_A549_MK2206_60min_R1 2 TQTPPVSPAPQPTEER 16 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 T(0.008)QT(0.992)PPVSPAPQPTEER;T(0.005)QT(0.995)PPVSPAPQPTEER 290.0 4.539299999999999e-124 342470000.0 14202.1 15286.599999999999 14617.900000000001 12791.4 20403.7 19179.2 18081.4 19861.4 20828.8 20375.5 20973.0 True False 16599.067271991815 16064.622645652273 16690.938027714947 15925.293574227764 17402.342758617946 21208.730213877396 21366.556330567404 22676.814272986503 16111.110056758826 15772.660398600674 15764.825274646844 1.0529179348842266 1.0190168533924424 1.058745513314219 1.010178882213112 1.1038715910543313 1.3453197129932988 1.3553309953221824 1.4384437428212788 1.0219656593764397 1.0004970003674212 1.0 13.944421559922906 -8.956529578652843 24.99970891772992 1.0096901430936849 1.172010928095875 0.21701131088588066 0.14014894740592143 168.55118473811217 96933.63177249779 0.027070870249339282 0.028801233476802874 1.1052751894384428e-09 8.956529578652843 0.16232078500219016 TQT(ph)PPVSPAPQPTEER ddPTM_A549_PD325901_60min_R1 2 TQTPPVSPAPQPTEER 16 0 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 T(0.008)QT(0.992)PPVSPAPQPTEER;T(0.001)QT(0.999)PPVSPAPQPTEER 233.2 1.2232999999999998e-55 390910000.0 15282.1 15898.2 14533.900000000001 13631.900000000001 16694.6 13991.400000000001 15575.0 16607.800000000003 17155.2 16610.8 18387.5 True False 16833.52754191259 17237.997108737753 15520.257853440566 14473.911502708845 15522.02888924338 13877.458677233883 16167.715147967016 16276.544400432937 16434.226602815008 15561.991253183145 16125.954067966097 1.0438779293903655 1.0689598293586058 0.9624396663929029 0.8975538093253655 0.9625494915725697 0.8605666752332621 1.0025896811949797 1.0093383828226314 1.0191165455110212 0.9650276310842747 1.0 13.97709689750583 -7.969328568222741 24.99913040232561 1.0091438929202685 0.9642709042718827 0.06838293357298098 0.05611550670599353 336.44563585555 274223.64773815137 0.008956995413369613 0.012375829783505219 1.073177186180251e-08 7.969328568222741 -0.04487298864838585 TQT(ph)PPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A549_PD325901_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 T(0.099)QT(0.901)PPVSPAPQPT(0.002)EERLPS(0.579)S(0.419)PVYEDAASFK 124.11 2.2062e-21 69605000.0 2535.2 3262.8 3620.4 3583.6 3654.2 3168.8 3417.4 4291.9 3715.9 4085.7 4055.0 True False 2792.571637684401 3537.767606797597 3866.1021152337817 3804.950833053895 3397.541598305632 3142.994343412291 3547.4510270730334 4206.2946875695825 3559.7336453903335 3827.728204730076 3556.2607067628833 0.7852550383535755 0.9947998469487577 1.0871256170509878 1.069930229192163 0.9553691021146403 0.883791882140505 0.9975227688810618 1.1827858063303796 1.0009765703118576 1.076335094738962 1.0 11.79614537558091 -7.995667626307015 24.945855737942637 1.0177677210044043 0.9715564467246445 0.13910155398960466 0.0941495396340885 334.1610374079865 1924086.247445888 0.014804349370640483 0.02041146998271441 1.010025581835844e-08 7.995667626307015 -0.046211274279759795 TQT(ph)PPVSPAPQPTEERLPSS(ph)PVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 T(0.139)QT(0.86)PPVS(0.001)PAPQPTEERLPS(0.464)S(0.535)PVYEDAASFK 114.09 9.571200000000001e-21 44222000.0 5164.4 6787.1 5540.7 5024.6 7256.3 6421.8 5538.4 5551.6 9297.4 8842.0 8752.4 True False 6036.024462542474 7132.534399952013 6326.454574881494 6255.627225562868 6188.907882362488 7101.350613554161 6544.655589789202 6338.556301061956 7191.553744896949 6844.5860589643 6578.93752604868 0.9174770908894341 1.0841468507204115 0.9616225340083404 0.9508567608058754 0.9407154054675383 1.0794069080967916 0.994789137892898 0.9634619991396852 1.093117804572953 1.0403786374112551 1.0 12.683638897548619 -7.256774959024953 24.97299843283379 1.036403036482494 0.9756156714045977 0.21825985054023 0.05278166882957424 496.39354049789523 2657657.3581945687 0.008421308085243932 0.014281017694298848 5.5363691626070754e-08 7.256774959024953 -0.060787365077896394 TQT(ph)PPVSPAPQPTEERLPSS(ph)PVYEDAASFK ddPTM_A549_PD325901_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 2 T(0.109)QT(0.891)PPVSPAPQPT(0.005)EERLPS(0.232)S(0.763)PVYEDAASFK 146.02 3.8737e-36 64395000.0 2601.4 3237.5 2715.5 3306.3 3704.3 3524.0 3419.9 4123.4 3357.1 4000.2 3649.3 True False 2865.4922129505367 3510.335487007237 2899.790159628033 3510.5226418478896 3444.12274714125 3495.301712378478 3550.0461659410885 4041.155552255275 3216.012761629723 3747.6266893215975 3200.459234818693 0.8953378258270075 1.0968224337361694 0.9060543962192685 1.0968809112317164 1.0761339215546548 1.0921250532898876 1.109230240247756 1.2626799017748487 1.0048597796971819 1.1709652941522006 1.0 11.644063217355828 -5.246322995000638 23.9504056278976 1.0398493903346526 0.8953376372507582 0.12064885642216105 0.09672815925476441 2198.1767954393813 3482688.583876244 0.012670330821017347 0.38823511089614837 5.671226660857394e-06 5.246322995000638 -0.1445117530838944 TQT(ph)PPVSPAPQPTEERLPSSPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 T(0.021)QT(0.969)PPVS(0.007)PAPQPT(0.002)EERLPSSPVYEDAASFK 142.04 4.3180999999999996e-36 57647000.0 2097.2 2243.5 2018.2 2378.7 2492.7 2090.6 1896.2 1468.2 3579.2 3639.0 3013.8 True False 2451.1560883827897 2357.684567236721 2304.4111074459624 2961.481606783899 2126.027132059722 2311.8259043720327 2240.7149951896376 1676.3218461739243 2768.516914807919 2816.9473726047363 2265.3902833514826 1.0820016782081716 1.040741008100686 1.0172247688979894 1.307272141382455 0.9384816151477516 1.0204978459393108 0.9891077098974135 0.739970440631504 1.2220926942054755 1.2434711110516747 1.0 11.145543905066368 -4.117365969144053 15.73770064607614 1.0655419949495442 1.0598099354124646 0.0 0.15139623672329766 0.0 0.0 0.019362560392188023 0.0 7.631923893099829e-05 4.117365969144053 -0.005732059537079559 TQT(ph)PPVSPAPQPTEERLPSSPVYEDAASFK ddPTM_A549_PD325901_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 TQT(0.912)PPVS(0.065)PAPQPT(0.017)EERLPS(0.003)S(0.003)PVYEDAASFK 202.52 4.940999999999999e-78 106470000.0 3018.0 3646.5 3794.8 3939.7 4263.4 4248.8 3957.1 4409.3 4622.1 3974.8 4157.8 True False 3324.385138265825 3953.8033523928607 4052.337947986175 4183.046321292115 3963.9534919315356 4214.199181485148 4107.689605908206 4321.353052471068 4427.849210785724 3723.8304496563906 3646.416958465775 0.9116854095765711 1.0842982021607364 1.111320508363144 1.1471662097173128 1.087081794836585 1.1557096265969173 1.1265002474200074 1.1850956985153094 1.2143013981178759 1.0212300162248003 1.0 11.83226382396481 -5.238445354358857 2.6803493229181004 1.1165465904848189 0.8642871588379994 0.4837956022172386 0.06060323363310704 0.4362834211675176 3.9024747214590394 0.010914458561874212 0.2499518830081302 5.775035332400083e-06 5.238445354358857 -0.2522594316468194 TQTGDSS(ph)SISSFSYR ddPTM_A549_PD325901_60min_R1 1 TQTGDSSSISSFSYR 15 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 TQTGDS(0.002)S(0.709)S(0.288)IS(0.001)SFSYR 199.15 1.5521999999999998e-38 12768000.0 3544.6 3699.2 3339.9 3879.5 3927.4 2992.1 3447.0 3326.2 4182.5 4161.7 4689.7 True False 3904.445182603395 4010.944566343529 3566.565698450252 4119.127904016235 3651.5529727944654 2967.7333296275933 3578.177471270775 3259.8563316465784 4006.7240700355424 3898.9295517598366 4112.896630457681 0.94931760591535 0.9752116152496625 0.8671663839150188 1.001515057177078 0.8878299896363121 0.7215676921346175 0.8699896430104537 0.7925937908349093 0.9741854537174878 0.9479765484225082 1.0 12.005939097662521 -8.938455162535135 12.87222682550564 0.9886210226013218 0.8838926516631068 0.21723125925974462 0.0759243642720637 0.921780918730005 191.33370947937573 0.013530373392179143 0.014391099863421183 1.1522450138550038e-09 8.938455162535135 -0.10472837093821497 TQTGDSSS(ph)ISSFSYR ddPTM_A549_MK2206_60min_R1 1 TQTGDSSSISSFSYR 15 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 TQTGDSS(0.052)S(0.948)ISSFSYR 188.9 1.4855999999999999e-33 9099100.0 2693.7 3550.6 3065.1 2645.2 4183.0 3316.4 2991.0 2847.8 4687.5 4242.4 4156.6 True False 3148.3307053579624 3731.3103741612226 3499.77726956328 3293.274118747539 3567.6862411865914 3667.3392467518474 3534.4259838688986 3251.4843710217306 3625.788734399342 3284.038893525238 3124.401503676017 1.007658811344762 1.194248040711524 1.1201432547787518 1.0540495883364653 1.1418782883662766 1.173773358653501 1.1312329672452361 1.0406743074461442 1.16047464774723 1.0510937501666797 1.0 11.609364144717643 -10.924697684904752 1.0734947447679324 0.9971232723186295 1.119342510132283 0.24344130295803545 0.057224251365811385 0.4377992803686189 0.8604029593371116 0.041824350899123855 0.008946488204609672 1.1893298392633893e-11 10.924697684904752 0.1222192378136534 TQTGDSSS(ph)ISSFSYR ddPTM_A549_PD325901_60min_R1 1 TQTGDSSSISSFSYR 15 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 TQTGDSS(0.007)S(0.979)IS(0.013)S(0.001)FSYR 281.68 2.848099999999999e-106 17465000.0 5176.8 5172.2 4669.4 5104.4 5977.2 5567.9 5338.3 5634.9 6569.0 6015.0 7373.0 True False 5702.344925041261 5608.079445837481 4986.293563383221 5419.687195066499 5557.382092220575 5522.556868431358 5541.451927729845 5522.507499006464 6292.927774312846 5635.21187347368 6466.167741297839 0.8818739558242161 0.8672956951023778 0.7711358199907155 0.8381606249482637 0.8594552932375894 0.8540695338229679 0.8569916756625321 0.8540618987867502 0.9732082473087496 0.8714917550751048 1.0 12.658695218108086 -8.778606052390982 3.650535283678014 0.9887396285280795 0.8455108637423943 0.4430819719205146 0.04442165346148888 0.060444779926749674 1.675939693759467 0.005029503126460955 0.005450083805859241 1.664922213035802e-09 8.778606052390982 -0.14322876478568525 TQTPPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 TQTPPVSPAPQPT(0.333)EERLPS(0.333)S(0.333)PVY(0.001)EDAASFK 86.195 3.8633000000000005e-07 7152400.0 1109.1 1096.9 897.38 1074.1 1035.7 1049.2 678.46 1133.4 1591.8 1431.7 1515.1 True False 1296.2889651084074 1152.7275247612922 1024.6419778019301 1337.2545482181806 883.3499019834943 1160.2256475974057 801.7273998715126 1294.0629208919263 1231.2598415822665 1108.2779756411662 1138.858855367255 1.1382349612502112 1.0121776893850158 0.8997093651886364 1.174205690122107 0.775644758628702 1.018761580620331 0.7039743301754232 1.1362803342953518 1.0811347128571207 0.9731477877333383 1.0 10.153373242173817 -11.794029200549266 5.969754861565183 0.9993141607371903 1.0121083832434439 0.0 0.14353607759943704 3.063321843113711 259.1240470998508 0.1391621091361159 0.0186172040119784 1.6068332111387044e-12 11.794029200549266 0.012794222506253616 TQTPPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_A549_PD325901_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 T(0.002)QT(0.332)PPVS(0.114)PAPQPT(0.472)EERLPS(0.039)S(0.039)PVYEDAASFK 152.0 7.2181e-37 138350000.0 3244.7 3240.3 3726.3 3350.0 3954.3 4363.1 3554.3 4044.7 3793.7 4342.6 4145.2 True False 3574.099555378108 3513.371452833838 3979.1891260622133 3556.9218915979886 3676.5636095944287 4327.568360181196 3689.5608314875885 3964.0252854942305 3634.2639819471215 4068.4074948872453 3635.366678587795 0.9831469206199891 0.9664421125735388 1.0945771026343842 0.9784217676164982 1.0113322629184238 1.1904076652488589 1.014907479132434 1.090405902887933 0.9996966752632772 1.1191188825187974 1.0 11.827885172520972 -4.4362768782895605 16.303536399531577 1.0195572888341538 1.0335129554196443 0.0 0.07163996592986635 0.0 0.0 0.00834516324152431 0.0 3.662040320212316e-05 4.4362768782895605 0.013955666585490523 TQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A549_MK2206_60min_R1 2 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 TQTPPVS(0.012)PAPQPT(0.044)EERLPS(0.463)S(0.434)PVY(0.043)EDAAS(0.003)FK;TQTPPVSPAPQPT(0.004)EERLPS(0.493)S(0.493)PVY(0.01)EDAASFK 79.422 2.3686e-06 375566000.0 2912.6000000000004 3759.6000000000004 4135.8 2831.3999999999996 4074.7 2997.3 3682.9 2657.1000000000004 5134.7 5111.8 5657.8 True False 3404.1756737667915 3950.947581450046 4722.318629558518 3525.093127106374 3475.3170277224513 3314.472296553284 4352.035257770235 3033.7520620274718 3971.698648430995 3957.040829700713 4252.812112663753 0.8004528729661143 0.9290200170576935 1.110399073473455 0.8288852255216204 0.8171809465491958 0.7793601524703289 1.023331184749738 0.7133520084260854 0.9338993924994531 0.9304527745107029 1.0 12.05420140341229 -9.308126846825395 2.211197025751564 0.9783433082340625 0.8818374662402523 0.0832934749283718 0.10936088477469771 0.41219960091364377 4.127535670248968 0.022060527358490182 0.01979970440589828 4.918958439197432e-10 9.308126846825395 -0.09650584199381018 TQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_A549_PD325901_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 TQTPPVS(0.003)PAPQPT(0.014)EERLPS(0.484)S(0.484)PVY(0.011)EDAAS(0.004)FK 51.632 0.002168 2061500.0 516.46 313.9 576.71 479.81 765.29 769.9 452.22 457.64 593.19 686.84 811.17 True False 568.8906390022428 340.3534546321456 615.8490086389547 509.4467739724268 711.5386705071745 763.6301896595319 469.42947956427923 448.51201118836536 568.2602871737918 643.4728051831523 711.4012324302954 0.7996762067150114 0.4784268555023823 0.8656844837548083 0.7161173621137119 1.000193193475937 1.073417018200561 0.6598659914611196 0.6304627975638368 0.7987901359581508 0.9045146056113997 1.0 9.474519663499109 -14.999999997960803 0.20112645842824944 2.0510116706824904 0.7448175936560472 0.12019499751206109 0.16182885506896966 58.0565651503295 0.6850548751973538 23.947348254147037 0.1411794549188232 1.0000000046954252e-15 14.999999997960803 -1.306194077026443 TQTPPVSPAPQPTEERLPSS(ph)PVYEDAASFK ddPTM_A549_MK2206_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 TQTPPVSPAPQPTEERLPS(0.215)S(0.785)PVYEDAASFK 163.4 8.286200000000001e-47 403320000.0 2139.6 3184.6 2823.0 2389.9 3089.3 2888.4 2587.5 2477.4 3529.2 3402.4 3577.3 True False 2500.7121718023163 3346.6825374736195 3223.343849132864 2975.425607286687 2634.8680623709647 3194.048570835254 3057.615256857497 2828.5790367193035 2729.841834974325 2633.795476930574 2688.9576815426576 0.9299931304116528 1.2446021595823793 1.1987335729596267 1.1065349327400655 0.979884540562698 1.1878389134792278 1.1371005493486757 1.051923968954597 1.0152044614581708 0.9794856553560795 1.0 11.392831335109406 -8.503683747049667 2.9826862610046883 1.007181732388499 1.1178940727537268 0.24601459166107087 0.08706283245745199 0.2640274504304245 4.765980162676335 0.014250497093410733 0.016826290006953563 3.1355682118298363e-09 8.503683747049667 0.1107123403652277 TQTPPVSPAPQPTEERLPSS(ph)PVYEDAASFK ddPTM_A549_PD325901_60min_R1 2 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 H0YEV2;H0YCD9;Q14247-3;Q14247;Q14247-2 H0YEV2 CTTN Src substrate cortactin 1 TQTPPVSPAPQPTEERLPS(0.116)S(0.884)PVYEDAASFK;TQTPPVSPAPQPTEERLPS(0.03)S(0.97)PVYEDAASFK 296.76 1.3054999999999997e-185 1021720000.0 12938.2 12372.0 14479.900000000001 13875.8 14464.1 14665.0 14625.5 13552.2 15624.7 14370.8 16190.1 True False 14251.676539400565 13414.631859537783 15462.593088712196 14732.876651771743 13448.191514436117 14545.573102165246 15182.081405880683 13281.890739504772 14968.048195357875 13463.425235463923 14198.820337499823 1.0037225769919171 0.9447708711482913 1.089005475185476 1.0376127242670612 0.947134423478741 1.024421237569267 1.0692494900991187 0.9354221283036174 1.0541754765236715 0.9482073098640679 1.0 13.79348345266426 TQTPQLHFLDT(ph)DDEVSPTSWGDSR ddPTM_A549_PD325901_60min_R1 2 TQTPQLHFLDTDDEVSPTSWGDSR 24 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 TQTPQLHFLDT(1)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR 126.64 3.6453e-17 18597100.0 2857.81 2564.66 2320.83 2666.69 3101.89 3720.1 2937.23 2930.29 3322.3 3270.8 4305.8 True False 3147.932767391472 2780.7928988750514 2478.3354800845245 2831.4053848075955 2884.0239473395673 3689.8047389952235 3049.0078949639274 2871.843067181965 3182.6752846094646 3064.2811298017805 3776.2138967150763 0.8336214138001703 0.7363970831456501 0.6563016682504202 0.749800054300587 0.7637342656485577 0.9771175150340344 0.8074245734904624 0.7605085796861714 0.8428217711337987 0.8114691629272893 1.0 11.882724770492732 -13.750919024110372 0.13186200961691263 1.535621497640289 0.688245775062382 0.09050522159086127 0.09221561748324389 27.54947195006209 0.3405630762489792 4.165010505525452 0.23669514683351736 1.774520316238064e-14 13.750919024110372 -0.847375722577907 TQVYRPPPPYPPPRPANS(ph)TPDLSR ddPTM_A549_MK2206_60min_R1 2 TQVYRPPPPYPPPRPANSTPDLSR 24 2 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 TQVYRPPPPYPPPRPANS(0.932)T(0.063)PDLS(0.005)R;TQVYRPPPPYPPPRPANS(0.8)T(0.19)PDLS(0.01)R 68.516 3.9543000000000004e-05 8373500.0 1738.7199999999998 2298.8 2666.9 2099.8 2884.3999999999996 2213.3 1622.31 1701.6999999999998 3267.7 2871.6 3007.0 True False 2032.1734283773258 2415.7991010313244 3045.106521874757 2614.251094263605 2460.108580941576 2447.509936930365 1917.0627274792214 1942.9211862376833 2527.571167444634 2222.903565587184 2260.278911021937 0.8990808251440624 1.068805751914516 1.3472260025192986 1.1566055328462217 1.0884092971646981 1.0828353638108208 0.8481531717749216 0.8595935558055677 1.1182563156782481 0.983464277239195 1.0 11.142285092134749 -7.325369033225774 3.2670865477701536 1.0239036285752365 1.1268286755477408 0.172033480029552 0.1266516651805803 0.45926644341524464 9.715301515128255 0.020713934175240787 0.034839316044899496 4.7274937871993064e-08 7.325369033225774 0.10292504697250426 TQVYRPPPPYPPPRPANS(ph)TPDLSR ddPTM_A549_PD325901_60min_R1 1 TQVYRPPPPYPPPRPANSTPDLSR 24 2 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 TQVYRPPPPYPPPRPANS(0.743)T(0.254)PDLS(0.003)R 47.919 0.0021768 10880000.0 1444.2 2243.8 2514.5 1986.2 2475.6 2229.9 2360.0 2393.8 2255.9 2022.1 3222.9 True False 1590.814120836152 2432.8929006167846 2685.1490909168424 2108.883063012515 2301.722396356363 2211.7404337209873 2449.8110914415533 2346.0537811002273 2161.0923681035692 1894.4242609062546 2826.5037316463886 0.5628204566033 0.8607428581739983 0.9499895793000741 0.7461101287080657 0.8143355236313982 0.7825004470921705 0.8667284122121366 0.8300197006050625 0.7645814664623743 0.670235895921774 1.0 11.46480288635175 -10.83315344698885 0.8586389873914448 1.0123235989275978 0.802442556905078 0.0 0.13392472111317166 0.571083537821451 0.6726653704015959 0.08183497493443798 0.0159550800773398 1.4684073613137726e-11 10.83315344698885 -0.20988104202251978 TRAS(ph)LPVVR ddPTM_A549_PD325901_60min_R1 1 TRASLPVVR 9 1 Q5T5P2;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-10;Q5T5P0;Q5T5P1 Q5T5P2 KIAA1217 Sickle tail protein homolog 1 T(0.056)RAS(0.944)LPVVR 90.61399999999999 0.00029467 3740800.0 491.91 635.21 520.5 521.3 610.64 542.5 607.74 515.45 644.48 728.11 653.49 True False 541.8483410749974 688.7413759696893 555.8242600207661 553.4995170418006 567.7507529936377 538.082059865302 630.8678782680882 505.1689453872976 617.3947468395713 682.1370103399704 573.1148728144208 0.9454445640437118 1.201751007764737 0.969830458754726 0.9657741288822358 0.9906404107182888 0.9388729648960572 1.1007703833789153 0.8814444875711249 1.0772617779184537 1.1902273744706184 1.0 9.162680525667588 -11.557366292546666 2.8440049753865133 0.9994146532331735 1.023664486834766 0.0 0.10328053188968926 1.7147175900430125 25.221742379400066 0.07236896228175033 0.011616005891581852 2.7709820178142682e-12 11.557366292546666 0.024249833601592496 TRCEDLDELHYQDT(ph)DSDVPEQR ddPTM_A549_MK2206_60min_R1 1 TRCEDLDELHYQDTDSDVPEQR 22 1 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 TRCEDLDELHY(0.006)QDT(0.875)DS(0.119)DVPEQR 83.881 2.8063000000000002e-05 3463700.0 175.78 246.9 133.65 187.93 230.31 141.26 109.32 190.11 243.28 235.29 288.36 True False 205.4473665916112 259.46615540483475 152.60357967998848 233.97285843649834 196.43170408981214 156.2080394392009 129.18202893899968 217.0586746874573 188.17746843832995 182.13782558399805 216.75225366886772 0.9478442005289274 1.197063241617875 0.7040461037748695 1.079448330876128 0.9062498809811719 0.7206755030000279 0.5959893230745872 1.0014136924225836 0.8681684515530277 0.8403041836983614 1.0 7.759903183637043 -5.746410166604712 24.999819488453166 0.8992379408629259 1.0724536216760037 0.19300245140511285 0.15092311675244596 330.08881630410326 549065.3427249502 0.020564565212345405 0.07900841102930399 1.7930394024826352e-06 5.746410166604712 0.1732156808130778 TRCEDLDELHYQDT(ph)DSDVPEQR ddPTM_A549_PD325901_60min_R1 2 TRCEDLDELHYQDTDSDVPEQR 22 1 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 TRCEDLDELHYQDT(0.981)DS(0.019)DVPEQR;TRCEDLDELHY(0.008)QDT(0.893)DS(0.1)DVPEQR 82.84899999999999 3.7533e-05 10151700.0 502.59000000000003 260.36 456.15 549.46 593.15 467.31 468.36 362.97 392.33000000000004 438.8 364.87 True False 553.6125668127972 282.30145093349955 487.10708205278075 583.3988962858001 551.489190256413 463.5043822961366 486.183696096426 355.7302786055433 375.8417344643262 411.0940931139233 319.9933031014977 1.730075477977108 0.8822104968989217 1.5222414885922682 1.8231597056290694 1.7234397873679497 1.4484815082180613 1.519355847088509 1.111680385675791 1.174530000539149 1.284695926850474 1.0 8.321897902126869 -8.277154013394465 5.0996299004175265 1.0856226624539622 1.5144305246446572 0.3528859250012213 0.24213120363797438 0.1394140916486053 11.144924157581928 0.03945865522128208 0.04900321436980099 5.282578830175659e-09 8.277154013394465 0.428807862190695 TRCEDLDELHYQDTDS(ph)DVPEQR ddPTM_A549_MK2206_60min_R1 1 TRCEDLDELHYQDTDSDVPEQR 22 1 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 TRCEDLDELHYQDT(0.167)DS(0.833)DVPEQR 100.08 1.2636e-14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TRDDGDEEGLLT(ph)HSEEELEHSQDTDADDGALQ ddPTM_A549_MK2206_60min_R1 1 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLT(0.422)HS(0.422)EEELEHS(0.078)QDT(0.078)DADDGALQ 43.478 0.022231 3133600.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 181.34 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 140.26677954047494 0.0 0.0 0.0 TRDDGDEEGLLTHS(ph)EEELEHSQDT(ph)DADDGALQ ddPTM_A549_PD325901_60min_R1 2 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 2 TRDDGDEEGLLT(0.111)HS(0.879)EEELEHS(0.017)QDT(0.993)DADDGALQ;TRDDGDEEGLLT(0.003)HS(0.997)EEELEHSQDT(1)DADDGALQ 235.02 5.847099999999999e-130 185777000.0 673.89 534.53 688.15 555.58 661.87 548.13 765.66 358.21 620.47 303.24 821.67 True False 742.3028167084021 579.5767190331981 734.8519971821139 589.8969147862721 615.3825345275432 543.6662110119227 794.7976102852286 351.0652205396912 594.3938036425474 284.0933746487379 720.6097989952792 1.0301036951528673 0.80428648047984 1.0197640917549167 0.8186079562181149 0.8539746966882067 0.754452981030701 1.1029514327912093 0.487177972085821 0.824848349927089 0.39424023243208633 1.0 9.493074459726738 -4.360405917765695 16.703235204253478 0.8868006475045079 0.8803223467435624 0.0 0.22032098639581485 0.0 0.0 0.020363617738814496 0.0 4.3610802887520375e-05 4.360405917765695 -0.006478300760945577 TRDDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ ddPTM_A549_MK2206_60min_R1 10 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLT(0.123)HS(0.877)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.227)HS(0.258)EEELEHS(0.258)QDT(0.258)DADDGALQ;TRDDGDEEGLLT(0.014)HS(0.983)EEELEHS(0.002)QDTDADDGALQ;TRDDGDEEGLLT(0.001)HS(0.999)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.014)HS(0.986)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.113)HS(0.846)EEELEHS(0.021)QDT(0.02)DADDGALQ;TRDDGDEEGLLT(0.061)HS(0.939)EEELEHS(0.001)QDTDADDGALQ;TRDDGDEEGLLT(0.194)HS(0.297)EEELEHS(0.297)QDT(0.213)DADDGALQ;TRDDGDEEGLLT(0.047)HS(0.318)EEELEHS(0.318)QDT(0.318)DADDGALQ;TRDDGDEEGLLT(0.136)HS(0.543)EEELEHS(0.16)QDT(0.16)DADDGALQ 339.33 8.205999999999996e-263 1134492900.0 2195.92 3109.9 3195.0 2677.0800000000004 4367.56 2677.3799999999997 2539.29 2538.45 4287.570000000001 3999.73 4900.469999999999 True False 2566.537610910518 3268.1806265431155 3648.0990428549435 3332.964720178689 3725.0977096717475 2960.698574498991 3000.6461238978445 2898.2830611770883 3316.442240842363 3096.1882150668707 3683.5480529084325 0.6967569240433955 0.8872371364784141 0.9903763953817571 0.9048245529326182 1.011279792245552 0.803762712464495 0.8146075687891768 0.7868183120045578 0.9003390734169431 0.8405450860406727 1.0 11.846880347767366 -10.003307811955844 0.9702109015251564 0.9883389387502083 0.8715332638285489 0.0 0.09694243631644656 0.5468750320823342 1.0411061487150846 0.03296214748618703 0.017079405099342686 9.924124136763252e-11 10.003307811955844 -0.11680567492165939 TRDDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ ddPTM_A549_PD325901_60min_R1 8 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLT(0.012)HS(0.988)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.044)HS(0.956)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.01)HS(0.33)EEELEHS(0.33)QDT(0.33)DADDGALQ;TRDDGDEEGLLT(0.001)HS(0.999)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.018)HS(0.982)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.007)HS(0.993)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.039)HS(0.926)EEELEHS(0.017)QDT(0.017)DADDGALQ;TRDDGDEEGLLT(0.011)HS(0.515)EEELEHS(0.273)QDT(0.2)DADDGALQ 335.78 1.8333999999999991e-262 1290837300.0 2763.91 3518.68 3120.5 3365.2 4160.47 3708.49 3889.62 3989.2200000000003 3413.5700000000006 3681.4700000000003 5118.549999999999 True False 3044.500108516999 3815.2115124085326 3332.275895090877 3573.060761076286 3868.252940042314 3678.2892869859393 4037.6416175817317 3909.65187761745 3270.109523909438 3449.0213559164 4489.000799161817 0.678213313993053 0.849902168233275 0.7423201830824083 0.7959590387561182 0.8617180332791635 0.8194004526960091 0.8994521939794792 0.8709403389608346 0.7284715842599161 0.7683271868787368 1.0 12.132178637753746 -10.945280900771277 1.137046871673632 1.002879415938542 0.8037357138298779 0.0 0.09267265863548488 0.3093702942812895 0.6936511999922681 0.049719139393274235 0.01093759409782807 1.134276930391179e-11 10.945280900771277 -0.19914370210866406 TRDDGDEEGLLTHSEEELEHS(ph)QDTDADDGALQ ddPTM_A549_MK2206_60min_R1 3 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLT(0.002)HS(0.009)EEELEHS(0.495)QDT(0.495)DADDGALQ;TRDDGDEEGLLT(0.069)HS(0.069)EEELEHS(0.431)QDT(0.431)DADDGALQ;T(0.001)RDDGDEEGLLT(0.038)HS(0.237)EEELEHS(0.362)QDT(0.362)DADDGALQ 59.873000000000005 0.00064412 20276700.0 393.03 300.99 316.67999999999995 230.56 489.22 300.23 649.3199999999999 652.3599999999999 484.31 367.49 838.62 True False 459.3638553390654 316.3091053677649 361.5899858814721 287.04721035023175 417.25638606581504 332.00013932345547 767.2930390657817 744.8340277687107 374.61455828414836 284.4737537671104 630.3675092654522 0.728723877082986 0.5017852295978106 0.5736177397575928 0.4553648564227541 0.6619255909176395 0.5266771120712186 1.2172153986170458 1.181586958116929 0.5942796111441009 0.45128238620451566 1.0 9.30004936633679 -7.659627353228614 20.432193734681704 0.8657286060624219 0.5698323157206489 0.3302586057784188 0.22159900682165012 3.2900079532968722 650.8875356652802 0.03384069728264701 0.050193849282816165 2.189639640383222e-08 7.659627353228614 -0.295896290341773 TRDDGDEEGLLTHSEEELEHS(ph)QDTDADDGALQ ddPTM_A549_PD325901_60min_R1 5 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLTHS(0.001)EEELEHS(0.843)QDT(0.156)DADDGALQ;TRDDGDEEGLLT(0.002)HS(0.034)EEELEHS(0.79)QDT(0.174)DADDGALQ;TRDDGDEEGLLT(0.003)HS(0.015)EEELEHS(0.491)QDT(0.491)DADDGALQ;TRDDGDEEGLLT(0.001)HS(0.019)EEELEHS(0.49)QDT(0.49)DADDGALQ;TRDDGDEEGLLT(0.001)HS(0.022)EEELEHS(0.95)QDT(0.028)DADDGALQ 123.95 6.407200000000001e-22 60378800.0 971.1 899.0699999999999 597.73 1151.9 402.05 847.24 1184.34 951.4300000000001 1202.82 902.62 1108.8 True False 1069.685357113964 974.8377841864396 638.2955522424836 1223.0502468452908 373.81139499720274 840.3403583415271 1229.4107067957152 932.4529822676037 1152.2696583192235 845.6284191579067 972.4246292623142 1.100018782870023 1.0024815855661289 0.6563959128911591 1.2577326921193905 0.3844116898610207 0.8641701711926129 1.264273517761836 0.9588948636306824 1.1849449547502109 0.8696081873197765 1.0 9.925442623726125 -7.725213795644166 24.35892982600298 1.0899411203568228 0.8680295157843883 0.11494671479789165 0.2365820057389388 167.94178186660753 112927.44935931209 0.032986113744630605 0.04892528027985073 1.882722029905889e-08 7.725213795644166 -0.22191160457243453 TRDDGDEEGLLTHSEEELEHSQDT(ph)DADDGALQ ddPTM_A549_MK2206_60min_R1 2 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLTHSEEELEHS(0.001)QDT(0.999)DADDGALQ;TRDDGDEEGLLTHSEEELEHS(0.163)QDT(0.837)DADDGALQ 294.2 1.2289999999999996e-200 58440300.0 749.2199999999999 738.6800000000001 548.75 548.72 908.34 925.8800000000001 690.3 721.3100000000001 827.01 837.42 1089.13 True False 875.6700193296554 776.2756568426215 626.571001491909 683.1564246329771 774.724389270722 1023.8560070505966 815.71857461207 823.5579014192302 639.6935554635942 648.2462403865509 818.6689625411778 1.0696265027704779 0.9482167913548768 0.7653533114862571 0.8344721198571337 0.94632192585627 1.2506349378050328 0.9963961160565441 1.0059718141297027 0.7813824448382194 0.7918295062443448 1.0 9.677136390547387 -4.535882632566754 17.09995089395498 0.9303416409025745 0.9453152943099834 0.0 0.1398976673013575 2826210.700917118 0.09551167696462151 0.019564706120673223 6409680.04431904 2.91150384130868e-05 4.535882632566754 0.01497365340740886 TRDDGDEEGLLTHSEEELEHSQDT(ph)DADDGALQ ddPTM_A549_PD325901_60min_R1 3 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLTHSEEELEHS(0.009)QDT(0.991)DADDGALQ;TRDDGDEEGLLTHSEEELEHS(0.014)QDT(0.986)DADDGALQ;TRDDGDEEGLLTHSEEELEHS(0.117)QDT(0.883)DADDGALQ 326.78 1.6904999999999992e-240 305589000.0 2221.46 1789.55 1701.48 2751.11 2126.1699999999996 1745.25 2301.58 2285.57 2135.7599999999998 2863.52 2011.24 True False 2446.980983847583 1940.3616589262722 1816.9526646304184 2921.0398164758626 1976.8351540883052 1731.0372626357937 2389.1678863729016 2239.9825133550203 2046.0014345054656 2682.7168585086197 1763.8702303008108 1.3872794845175624 1.1000591911998892 1.0300942968579696 1.6560400908731863 1.1207372969558964 0.9813858371772521 1.3545032085299453 1.269924779541754 1.1599500912017433 1.520926433488879 1.0 10.784528708942883 -9.948137478675605 0.5882769113340648 0.9970176903881116 1.2348942250466493 0.0 0.23693596205940495 1.0305701647815366 0.7130144329084794 0.11341100275550375 0.04290233098482505 1.1268406911352207e-10 9.948137478675605 0.23787653465853764 TREEEEDST(ph)IEASDQVSDDTVEMPLPK ddPTM_A549_MK2206_60min_R1 1 TREEEEDSTIEASDQVSDDTVEMPLPK 27 1 P12270 P12270 TPR Nucleoprotein TPR 1 T(0.188)REEEEDS(0.353)T(0.422)IEAS(0.036)DQVS(0.001)DDT(0.001)VEMPLPK 51.479 0.0055949 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TREEEEDSTIEASDQVS(ph)DDTVEMPLPK ddPTM_A549_MK2206_60min_R1 2 TREEEEDSTIEASDQVSDDTVEMPLPK 27 1 P12270 P12270 TPR Nucleoprotein TPR 1 TREEEEDSTIEAS(0.005)DQVS(0.873)DDT(0.122)VEMPLPK;TREEEEDSTIEAS(0.013)DQVS(0.982)DDT(0.005)VEMPLPK 101.37 6.6297e-13 14555400.0 1015.35 1350.1100000000001 1448.3000000000002 1186.32 1465.38 1733.2 1135.4 1106.46 1974.37 1334.79 1969.85 True False 1186.7162570758474 1418.8248322139373 1653.6907179238847 1476.9684532559281 1249.8245431771484 1916.606073594952 1341.6874831443495 1263.3040933916368 1527.1783474210183 1033.260011948084 1480.681879905739 0.8014660496496346 0.9582239449734202 1.1168440300148468 0.9974920834108896 0.8440871466980557 1.2944077317384097 0.9061281166145979 0.8531907565938873 1.0314020642423471 0.697827147053263 1.0 10.532045999845959 -5.318005248083707 3.7485794906068923 1.0089178254906372 0.790559574390611 0.04781358912020783 0.15169445048006208 0.2563514796431016 6.336781504603095 0.014925082641913187 0.13716118794553767 4.80833537945547e-06 5.318005248083707 -0.21835825110002627 TREEEEDSTIEASDQVS(ph)DDTVEMPLPK ddPTM_A549_PD325901_60min_R1 2 TREEEEDSTIEASDQVSDDTVEMPLPK 27 1 P12270 P12270 TPR Nucleoprotein TPR 1 TREEEEDSTIEAS(0.004)DQVS(0.976)DDT(0.02)VEMPLPK;TREEEEDSTIEAS(0.005)DQVS(0.995)DDTVEMPLPK 145.64 2.7981e-33 27913000.0 2816.5 3121.8 2747.7 3199.6 3861.8 3216.2 3184.5 3152.5 3840.1000000000004 3626.1 3611.8 True False 3102.429006602286 3384.885041958054 2934.1754452623613 3397.23202518117 3590.5604904867528 3190.0083335277113 3305.6878901252644 3089.6209144115946 3678.7139513074662 3397.147427165901 3167.5714970866047 0.9794345634994398 1.0686057268387863 0.9263170375036803 1.0725036603927636 1.1335373151921575 1.0070832928196705 1.043603244051695 0.9753910581823628 1.1613672981623266 1.0724769528613483 1.0 11.629161468299099 -6.353930086297928 24.99986077769604 1.067153370703563 0.999153432073309 0.1788784496629855 0.061014616102442194 81.38353732899444 21992.8939424952 0.010162260273577436 0.02361495982512519 4.426596269690404e-07 6.353930086297928 -0.067999938630254 TRELLELGIDNEDS(ph)EHENDDDTNQSATLNDKDDDSLPAETGQNHPFFR ddPTM_A549_PD325901_60min_R1 1 TRELLELGIDNEDSEHENDDDTNQSATLNDKDDDSLPAETGQNHPFFR 48 2 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 T(0.001)RELLELGIDNEDS(0.999)EHENDDDTNQSATLNDKDDDSLPAETGQNHPFFR 106.02 6.1810000000000005e-18 8373800.0 1115.1 1476.5 1125.2 1213.6 1334.4 1287.3 957.27 1392.3 1386.9 1516.8 1442.0 True False 1228.3041311067666 1600.9298367772012 1201.562838377265 1288.5613157144237 1240.6763474300894 1276.8166556029548 993.699433688244 1364.5294842617798 1328.613416074666 1421.0289891412924 1264.6431415911413 0.9712654034254644 1.2659142995572275 0.950120076455315 1.0189129829093044 0.9810485714326513 1.009626046756951 0.7857548117787576 1.078983817162021 1.0505836566693738 1.1236600606186742 1.0 10.304514625717097 -5.801090524134718 24.99995080921166 1.0043028493385362 1.118591679189559 0.16378374807284246 0.10307742525286538 160.53409618419238 101216.11560270961 0.012352223874274948 0.03840534143373135 1.5809184790309656e-06 5.801090524134718 0.11428882985102273 TRENVPNSDSQPPPSCLTTAVPSPS(ph)KPR ddPTM_A549_PD325901_60min_R1 1 TRENVPNSDSQPPPSCLTTAVPSPSKPR 28 2 Q8IY92 Q8IY92 SLX4 Structure-specific endonuclease subunit SLX4 1 TRENVPNSDSQPPPS(0.009)CLT(0.009)T(0.009)AVPS(0.455)PS(0.519)KPR 43.438 0.010568000000000001 6198900.0 1266.0 1769.8 1302.7 1723.3 1678.9 1660.0 1382.6 1908.1 1848.7 2592.5 3629.7 True False 1394.5233880200587 1918.94725711364 1391.1090557714738 1829.744327101736 1560.9798558905711 1646.481510371246 1435.2155995877504 1870.0414486245083 1771.0055680274245 2428.809107561181 3183.2699105640554 0.4380789022609013 0.6028226669517994 0.4370063157870826 0.5748002458194055 0.490369933982122 0.5172296275936903 0.45086205063064827 0.5874592796603756 0.5563479119851366 0.7629918843830655 1.0 11.636293773437101 -10.575313916169748 0.5251364762850268 1.0763375946534115 0.5016254858439141 0.7045696469613097 0.08674250615151827 0.23122384995519837 0.09359385565856077 0.06546610229409815 0.011672623222752395 2.658802532891789e-11 10.575313916169748 -0.5747121088094974 TRETDKS(ph)PTSTEPR ddPTM_A549_MK2206_60min_R1 2 TRETDKSPTSTEPR 14 2 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 T(0.096)RET(0.096)DKS(0.64)PT(0.064)S(0.085)T(0.018)EPR;T(0.013)RET(0.019)DKS(0.923)PT(0.015)S(0.015)T(0.015)EPR 59.434 0.0016791 11826500.0 1111.73 1247.3000000000002 1187.41 828.8399999999999 1364.25 906.99 930.9100000000001 930.15 1729.1 1578.02 1611.43 True False 1299.3628448110821 1310.7822423509522 1355.8025929503572 1031.9058372080412 1163.5706322110477 1002.9670797887643 1100.044297105783 1062.001610964907 1337.461610805312 1221.5441860175124 1211.267457794506 1.072729921413873 1.0821575647195576 1.119325533122984 0.8519223649308229 0.9606223833749274 0.8280310622849406 0.9081762165960936 0.8767688788557199 1.1041835576434804 1.008484276661505 1.0 10.242301743773696 TRETDKS(ph)PTSTEPR ddPTM_A549_PD325901_60min_R1 4 TRETDKSPTSTEPR 14 2 Q6IQ19;Q6IQ19-2 Q6IQ19 CCSAP Centriole, cilia and spindle-associated protein 1 T(0.001)RET(0.005)DKS(0.957)PT(0.013)S(0.019)T(0.005)EPR;T(0.002)RET(0.002)DKS(0.767)PT(0.174)S(0.041)T(0.014)EPR;T(0.004)RET(0.004)DKS(0.753)PT(0.165)S(0.037)T(0.037)EPR;T(0.001)RET(0.002)DKS(0.931)PT(0.043)S(0.012)T(0.012)EPR 103.5 8.3034e-06 35507400.0 4396.49 4101.79 4175.41 3865.3399999999997 5012.5 5203.83 4478.46 4990.799999999999 4916.29 5504.5 5270.700000000001 True False 4842.818428275126 4447.462238533256 4458.778431380036 4104.093272975932 4660.4392921862445 5161.451733804335 4648.890246007347 4891.25457879314 4709.675428159005 5156.944930596152 4622.437313720135 1.0476763879308575 0.962146576943829 0.9645946778219505 0.8878634786012838 1.0082211993126038 1.1166082703781226 1.00572272385581 1.0581548751943295 1.0188727522988648 1.115633286208017 1.0 12.174438039597494 -6.978588848690644 24.964920399522164 1.0213974919113105 0.9631043203262818 0.27403196233321847 0.054625389645433994 254.12026699960137 296297.22803749493 0.006727028064200261 0.012712297171248756 1.0505365123649174e-07 6.978588848690644 -0.05829317158502867 TRFS(ph)LLAAAER ddPTM_A549_MK2206_60min_R1 2 TRFSLLAAAER 11 1 Q8TDN4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 T(0.041)RFS(0.959)LLAAAER;T(0.029)RFS(0.971)LLAAAER 97.417 7.7828e-05 4971700.0 408.87 559.14 774.99 315.89 732.98 578.08 531.84 648.23 747.36 777.27 739.01 True False 477.8772600882467 587.5978377199643 884.8952354372939 393.28306418084077 625.1596129727346 639.2520419015525 628.468443751533 740.1185876211166 578.0841532886809 601.6841671625401 555.4934213615967 0.8602752826791337 1.0577944132617718 1.5929895862101922 0.7079886980782701 1.1254131713034077 1.1507823807069597 1.1313697328963206 1.3323624712007862 1.0406678658258652 1.083152642362034 1.0 9.117626015835176 -8.976973507523477 24.839594284974083 1.0179415570199855 1.1255092192443925 0.02293403754631096 0.2165496700675091 368.98402668179426 398042.3955316488 0.036031906822673224 0.03712181623331336 1.0544512171995197e-09 8.976973507523477 0.10756766222440706 TRFS(ph)LLAAAER ddPTM_A549_PD325901_60min_R1 1 TRFSLLAAAER 11 1 Q8TDN4 Q8TDN4 CABLES1 CDK5 and ABL1 enzyme substrate 1 1 T(0.247)RFS(0.753)LLAAAER 102.65 6.3195e-05 6022800.0 302.39 362.48 225.24 374.69 402.53 357.45 376.72 343.68 356.84 348.56 454.15 True False 333.08841019224747 393.02746172367057 240.5261408781506 397.83375031726854 374.2576814531131 354.5390457121698 391.05628574909383 336.82503278825556 341.8432557445268 326.5518621143781 398.2924290940476 0.8362910913217392 0.986781151270305 0.6038933288921641 0.9988483869055148 0.939655524721864 0.8901475895954165 0.9818320841261959 0.8456726972049023 0.8582720402747309 0.819879661928674 1.0 8.637684246398035 -10.817296490611799 0.9379480859447749 1.0038827093170843 0.8829432724891652 0.0 0.11684383539698256 0.9317401170797958 1.378083245938543 0.07963362121517599 0.017384345643719032 1.5230126458899826e-11 10.817296490611799 -0.12093943682791919 TRGTS(ph)KTDSK ddPTM_A549_MK2206_60min_R1 1 TRGTSKTDSK 10 2 O75494-2;O75494 O75494-2 SRSF10 Serine/arginine-rich splicing factor 10 1 T(0.106)RGT(0.106)S(0.775)KT(0.012)DSK 53.251999999999995 0.0044271 3244700.0 1086.4 1013.0 1171.8 904.6 2301.1 1464.5 1506.6 1779.3 2550.7 2211.9 2133.5 True False 1269.7577600701234 1064.5573731271659 1337.9788602245449 1126.227040609037 1962.6112382487374 1619.472417943577 1780.3297182537221 2031.521223877717 1972.970522630911 1712.230253768733 1603.69306839551 0.7917710596208488 0.6638161591558491 0.8343110577656787 0.7022709412442767 1.2238072714327586 1.009839382522152 1.1101436760806958 1.2667768314982166 1.2302669142324485 1.0676795251611422 1.0 10.647182334761856 -6.756245919148658 24.99997768319793 1.122370501335512 0.7481881446123668 0.8009237656493903 0.0915057834781262 50.97647339074194 245384.7431651095 0.015598621590819544 0.031722089107846047 1.7528876485463848e-07 6.756245919148658 -0.37418235672314526 TRHS(ph)PT(ph)PQQSNR ddPTM_A549_PD325901_60min_R1 2 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(0.129)RHS(0.871)PT(0.997)PQQS(0.003)NR;T(0.347)RHS(0.655)PT(0.965)PQQS(0.034)NR 80.488 0.00043366 46431000.0 2194.8 2632.1000000000004 2772.7 2461.7 2816.4 2359.2 2168.5 2571.6 2768.1 2706.0 2850.6 True False 2417.614480273636 2853.9163043557533 2960.8720955995736 2613.753618073662 2618.5857800525355 2339.987457390268 2251.023454148731 2520.3074206188257 2651.76638332705 2535.1426981911495 2499.9942714422373 0.9670480080256038 1.141569137560199 1.1843515520903405 1.045503842921127 1.0474367121416974 0.935997127721552 0.9004114448830813 1.0081252782890857 1.0607089838638935 1.0140594029156056 1.0 11.287709073720912 -6.619517959977285 3.051363160686994 1.0115063019065003 1.1029093557209353 0.2886669709215326 0.06676379188549456 0.2793934431884955 5.20863667746661 0.010206559564135157 0.02306257065036341 2.40149695342427e-07 6.619517959977285 0.09140305381443503 TRHS(ph)PTPQQSNR ddPTM_A549_MK2206_60min_R1 11 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.129)RHS(0.86)PT(0.012)PQQSNR;T(0.003)RHS(0.947)PT(0.05)PQQSNR;T(0.001)RHS(0.999)PTPQQSNR;T(0.004)RHS(0.991)PT(0.005)PQQSNR;TRHS(1)PTPQQSNR;T(0.02)RHS(0.949)PT(0.031)PQQSNR;T(0.006)RHS(0.98)PT(0.014)PQQSNR;T(0.105)RHS(0.766)PT(0.129)PQQSNR;T(0.172)RHS(0.789)PT(0.039)PQQSNR;T(0.137)RHS(0.725)PT(0.137)PQQSNR;T(0.161)RHS(0.813)PT(0.026)PQQSNR 180.56 1.0158e-17 1679645700.0 8405.89 10025.13 8480.39 6821.21 10102.02 7384.14 7661.679999999999 8590.689 12539.34 13526.910000000002 14826.61 True False 9824.598727720771 10535.366296207647 9683.036820668744 8492.406756215756 8616.02624006498 8165.52479360457 9053.708081607716 9808.445473631677 9699.199511211318 10471.171636152993 11144.753543381094 0.8815447277033447 0.9453207067521593 0.8688426157633187 0.7620093816484103 0.7731015501174602 0.7326788126646463 0.8123740059720517 0.8800953233691691 0.8702928668146013 0.939560627823112 1.0 13.444077092542509 -9.97873470301538 0.6565062880920844 0.9956556488780007 0.8282680408735892 0.42484585923900864 0.06045140248237872 0.46901889464374436 0.4052779400777877 0.03754874874419848 0.014974407890303772 1.050183757326248e-10 9.97873470301538 -0.16738760800441155 TRHS(ph)PTPQQSNR ddPTM_A549_PD325901_60min_R1 11 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.011)RHS(0.976)PT(0.012)PQQSNR;T(0.281)RHS(0.669)PT(0.049)PQQS(0.001)NR;T(0.271)RHS(0.728)PT(0.001)PQQSNR;TRHS(1)PTPQQSNR;T(0.012)RHS(0.918)PT(0.07)PQQSNR;T(0.281)RHS(0.705)PT(0.014)PQQSNR;T(0.027)RHS(0.834)PT(0.139)PQQSNR;TRHS(0.996)PT(0.003)PQQSNR;T(0.009)RHS(0.929)PT(0.062)PQQSNR;T(0.078)RHS(0.908)PT(0.014)PQQSNR;T(0.019)RHS(0.98)PT(0.001)PQQSNR 163.84 8.2964e-15 2902725300.0 13348.510000000002 13649.859999999999 13573.769999999999 13827.349999999999 16960.83 14634.06 13664.460000000001 12566.65 16218.49 15884.260000000002 16282.76 True False 14703.640908546307 14800.181606387832 14494.967657909843 14681.434005309677 15769.559812487025 14514.885067267125 14184.468502779422 12315.998307403785 15536.88326661823 14881.325112775223 14280.08374491995 1.0296606918553286 1.0364212052784987 1.0150478048188154 1.028105595706503 1.1043044350560582 1.0164425732048459 0.9933042940189659 0.8624598095781563 1.0880106548496522 1.042103490329261 1.0 13.801716819562571 TRHT(ph)LEK ddPTM_A549_MK2206_60min_R1 2 TRHTLEK 7 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 T(0.171)RHT(0.829)LEK;T(0.057)RHT(0.943)LEK 76.22800000000001 0.0070387 133632000.0 12913.8 13453.0 10758.3 7298.2 15509.3 12903.8 11148.0 13937.1 16980.5 16392.2 16275.0 True False 15093.333727902766 14137.700237591083 12283.988711344698 9086.259327628648 13227.902515045469 14269.271551150783 13173.447297950683 15912.726605578666 13134.443862286518 12689.190635122664 12233.46833285068 1.2337738830264884 1.1556575660254047 1.0041296856393829 0.7427377976881018 1.0812880006828827 1.1664125955869225 1.0768366696610367 1.3007534881050886 1.073648413101004 1.0372520931818026 1.0 13.578545862501105 TRHT(ph)LEK ddPTM_A549_PD325901_60min_R1 2 TRHTLEK 7 1 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 T(0.015)RHT(0.985)LEK;T(0.013)RHT(0.987)LEK 81.771 0.006044699999999999 221550000.0 14967.7 16011.0 16808.3 16279.9 17404.5 13994.2 16480.1 13747.8 16134.300000000001 17721.5 18592.300000000003 True False 16487.20988536163 17360.303160609383 17949.01231451882 17285.472448664514 16182.067962265435 13880.235874962227 17107.259223756737 13473.589344059532 15456.231479539614 16602.56146562989 16305.564966300266 1.0111400567497526 1.064685780375535 1.1007905798796405 1.0600965059713958 0.9924260824883977 0.851257586207493 1.0491669107518435 0.8263184607160956 0.9479114346227179 1.0182144255622816 1.0 13.993076808980438 -6.852112970936578 4.284972596220702 0.9595558119961369 1.0627084447056132 0.375465082151216 0.0654004095926602 0.17970801656487378 6.053920935324102 0.0090217414760287 0.01768670109049185 1.4056818233102745e-07 6.852112970936578 0.10315263270947628 TRHT(ph)LEKR ddPTM_A549_MK2206_60min_R1 2 TRHTLEKR 8 2 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 T(0.022)RHT(0.978)LEKR;T(0.026)RHT(0.974)LEKR 57.019 0.0060686 111259000.0 2000.3000000000002 1905.85 1412.21 933.6700000000001 2117.71 1535.9099999999999 1348.1399999999999 1252.94 2264.4 2662.4 2512.8 True False 2337.901737360337 2002.849624456475 1612.4826132426224 1162.419191914039 1806.197664313473 1698.4389767454559 1593.0795873931856 1430.5480819678223 1751.517015503758 2060.961990882894 1888.8024102480601 1.2377693530438134 1.0603807013320345 0.8537063509098614 0.6154265716769052 0.9562660734196445 0.8992147445017272 0.8434336904430164 0.757383659723277 0.9273161692300721 1.0911474803826748 1.0 10.883256072325347 -5.482344597251072 3.2769436042395563 0.9093715724221187 1.227982956254629 0.4333815971384627 0.1214369883572206 0.19801798098282222 3.9447049446002285 0.0168943671622963 0.11866573736706391 3.2934828230553993e-06 5.482344597251072 0.3186113838325102 TRHT(ph)LEKR ddPTM_A549_PD325901_60min_R1 2 TRHTLEKR 8 2 Q6NZI2;Q6NZI2-3;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 T(0.002)RHT(0.998)LEKR;T(0.021)RHT(0.979)LEKR 60.434 0.0039054000000000003 146435000.0 1213.3600000000001 1319.9 1093.73 1280.25 1559.5 1443.83 1363.69 1308.8600000000001 1651.15 1597.84 1515.88 True False 1336.5394139715788 1431.1326051894523 1167.9570949327817 1359.3281348412904 1449.9660999829318 1432.0719271803105 1415.5859691898004 1282.753760519194 1581.7579075287945 1496.95210971092 1329.4363699550488 1.0053428988231834 1.0764957522847385 0.878535536809688 1.0224845397356268 1.090662278204378 1.0772023088466671 1.0648015965124111 0.9648854127276258 1.1897958738576389 1.1260050827115067 1.0 10.376599012630798 -6.6070528037869325 5.101982979297036 1.0789254381225506 0.9889814489522021 0.22682922991973264 0.07027764976620589 0.2641469832027502 11.843247729969873 0.011956261374267163 0.02538943262746121 2.471423638179324e-07 6.6070528037869325 -0.08994398917034852 TRLS(ph)PPR ddPTM_A549_MK2206_60min_R1 7 TRLSPPR 7 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.01)RLS(0.99)PPR;T(0.05)RLS(0.95)PPR;T(0.029)RLS(0.971)PPR;TRLS(1)PPR;T(0.019)RLS(0.981)PPR;TRLS(1)PPR;T(0.035)RLS(0.965)PPR 97.635 0.0046139 3283985000.0 31797.0 35695.8 31345.7 29644.5 43683.600000000006 32825.0 30921.899999999998 32701.8 46520.9 46600.7 46476.0 True False 37163.55623798759 37512.56375091086 35790.99160175843 36907.40383079217 37257.800307314996 36298.51971252846 36540.00897044325 37337.38029506229 35983.9904286119 36073.56950440823 34934.72652765396 1.0637998327701037 1.0737901074226617 1.0245104272800494 1.056467518117729 1.066497551593029 1.039038324338819 1.045950909090946 1.068775513828809 1.0300349825302726 1.0325991667876024 1.0 15.092374226310248 -9.530482359316743 0.622491532990648 1.0016286635717846 1.055721937350778 0.3828255102422945 0.017074978507275414 0.2914379201814386 0.24815602474084328 0.0065252485036458256 0.0036860028351939932 2.947933216787783e-10 9.530482359316743 0.05409327377899342 TRLS(ph)PPR ddPTM_A549_PD325901_60min_R1 9 TRLSPPR 7 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 TRLS(1)PPR;T(0.274)RLS(0.726)PPR;T(0.128)RLS(0.872)PPR;T(0.26)RLS(0.74)PPR;T(0.001)RLS(0.999)PPR;T(0.026)RLS(0.974)PPR;T(0.009)RLS(0.991)PPR;T(0.063)RLS(0.937)PPR;T(0.003)RLS(0.997)PPR 93.178 0.004145899999999999 4920655000.0 39119.240000000005 38724.51 37522.151 41704.259999999995 47310.520000000004 41832.89 41219.327 42577.46 45072.42 45900.770000000004 46578.630000000005 True False 43090.59644673762 41987.960361379686 40068.6298058837 44280.23742295354 43987.59228763356 41492.21681349048 42787.9510450662 41728.2191589288 43178.182930962685 43002.58754872559 40849.75379626311 1.0548557198569823 1.027863241741758 0.980878122441686 1.0839780734983095 1.0768141347196443 1.0157274636325015 1.0474469750410196 1.0215047896505571 1.0569998327606218 1.0527012662842394 1.0 15.318039762743403 -10.940972178543337 1.1376691295576487 0.9994486930562545 1.04130425243496 0.0 0.03164704294562647 0.6174525754936488 1.3888674857590118 0.02081698877297843 0.0046128299436201696 1.1455863268114992e-11 10.940972178543337 0.041855559378705554 TRLS(ph)PPRASYDDPYKK ddPTM_A549_PD325901_60min_R1 1 TRLSPPRASYDDPYKK 16 3 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.261)RLS(0.723)PPRAS(0.013)Y(0.002)DDPY(0.001)KK 51.818999999999996 0.005473899999999999 21532000.0 1438.7 2078.9 2667.4 2745.7 2146.1 5993.5 3395.6 3795.6 4287.1 2730.0 3189.1 True False 1584.7557648850377 2254.0961989001844 2848.425804379235 2915.2956530628644 1995.3653396430723 5944.690923138594 3524.8214161436167 3719.8937804094007 4106.928095791842 2557.6273340952844 2796.860917370532 0.5666194393301992 0.8059378944804206 1.0184367004767552 1.042345593574842 0.7134303058297995 2.1254867863531426 1.2602776899816228 1.3300245848144132 1.4684062658549961 0.914463539538404 1.0 11.449592797750846 TRLS(ph)TASEETVQNR ddPTM_A549_MK2206_60min_R1 4 TRLSTASEETVQNR 14 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 T(0.085)RLS(0.909)T(0.006)ASEETVQNR;T(0.001)RLS(0.983)T(0.016)ASEETVQNR;T(0.151)RLS(0.424)T(0.424)AS(0.001)EETVQNR;TRLS(0.991)T(0.009)ASEETVQNR 204.23 8.2123e-32 248436000.0 10262.0 10370.7 9607.2 8574.8 9909.1 7116.6 6767.2 7274.6 10495.900000000001 12581.8 12797.6 True False 11993.97471818816 10898.524333158835 10969.645422383723 10675.626384937399 8451.484516505392 7869.673888383245 7996.712643944372 8305.796827528153 8118.59540850817 9739.562641560393 9619.602724208287 1.2468264087460315 1.1329495245923273 1.140342874532435 1.1097783028057455 0.8785689761633027 0.8180872031834282 0.8312934404058269 0.8634241003140529 0.8439636896934688 1.012470360865342 1.0 13.231761598652259 -6.674510540499713 4.133153661021254 0.9013993389086091 1.162938141376409 0.7886900810299187 0.06624477900661713 0.09157681741946382 2.93077577859717 0.011200431282389957 0.023875443662091808 2.1158723315551893e-07 6.674510540499713 0.2615388024677999 TRLS(ph)TASEETVQNR ddPTM_A549_PD325901_60min_R1 4 TRLSTASEETVQNR 14 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 TRLS(0.877)T(0.123)ASEETVQNR;TRLS(0.855)T(0.139)AS(0.006)EETVQNR;T(0.081)RLS(0.863)T(0.055)ASEETVQNR;TRLS(0.928)T(0.071)ASEETVQNR 180.12 3.1341999999999998e-24 126301000.0 12795.400000000001 13078.6 14094.0 14208.199999999999 15889.3 14498.800000000001 13973.499999999998 16568.4 21093.9 24529.3 26415.9 True False 14094.37958852437 14180.77952135069 15050.503594106975 15085.808244836573 14773.290383109214 14380.726579861826 14505.2691890926 16237.930264341641 20207.396739013202 22980.515811803467 23166.911764186843 0.6083840492850032 0.6121135033316096 0.6496551524564088 0.6511790780917701 0.6376892411679522 0.6207442203018461 0.6261201033931478 0.7009104376804964 0.8722525015289831 0.9919542166741654 1.0 14.499778119935218 -8.864869254432277 1.1540207926040436 0.9624526933450649 0.6250639608979448 0.9661274380057028 0.026894303732573482 0.06051584429183915 0.161520049321027 0.007378983199656664 0.007472993889200854 1.3649940100006888e-09 8.864869254432277 -0.3373887324471201 TRNS(ph)GIWESPELDR ddPTM_A549_MK2206_60min_R1 4 TRNSGIWESPELDR 14 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.003)RNS(0.997)GIWESPELDR;T(0.001)RNS(0.97)GIWES(0.029)PELDR;T(0.007)RNS(0.993)GIWESPELDR;T(0.002)RNS(0.998)GIWESPELDR 183.24 1.4727e-26 111936100.0 9077.23 8538.1 6648.219999999999 6189.79 13406.4 10687.199999999999 9806.07 10814.9 14342.800000000001 12732.6 14349.0 True False 10609.244507033622 8972.652820826323 7591.037564534924 7706.288827870234 11434.336319350687 11818.112410410786 11587.705987173951 12347.945194242182 11094.17870074515 9856.296816825257 10785.747287746513 0.9836355538467498 0.8318990405996242 0.7038026538188004 0.7144881687173595 1.0601338984032218 1.0957156787677682 1.0743535591955253 1.1448390978222207 1.0285962024484885 0.9138260478272853 1.0 13.396838516268208 -6.771410430442394 24.99714498429637 1.0375916812394939 0.8026555654137385 0.6268442406608529 0.08775293349458153 95.59771258508286 239661.10309637763 0.012218035542050849 0.02328387726679135 1.692737321169961e-07 6.771410430442394 -0.23493611582575535 TRNS(ph)GIWESPELDR ddPTM_A549_PD325901_60min_R1 2 TRNSGIWESPELDR 14 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.044)RNS(0.956)GIWESPELDR;T(0.103)RNS(0.897)GIWESPELDR 190.25 5.409399999999999e-27 176264000.0 2714.2 2564.8 2912.8999999999996 3117.6000000000004 2874.9 3256.7 2504.4 2468.1000000000004 3301.0 3203.1000000000004 3873.5 True False 2989.743585911567 2780.944697166383 3110.5869106906634 3310.167071416683 2672.976941866582 3230.178514955443 2599.7063124602637 2418.871809313006 3162.2704495367184 3000.855719355535 3397.084056139589 0.8800911418450683 0.8186269904450405 0.9156638043939078 0.9744142378326436 0.7868445106725223 0.9508679978399429 0.7652758275915442 0.7120435553960908 0.9308778932983748 0.8833622217654737 1.0 11.730081200811327 -8.976781934678884 12.964151025338836 0.9695381730004184 0.8520633069935022 0.17798332697739894 0.08001493391470828 0.7390747405325707 411.11252970012424 0.013715274511663409 0.014191566120193832 1.0549164517061843e-09 8.976781934678884 -0.11747486600691626 TRNS(ph)GIWESPELDRNLAEDASSTEAAGGYK ddPTM_A549_PD325901_60min_R1 1 TRNSGIWESPELDRNLAEDASSTEAAGGYK 30 2 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.25)RNS(0.75)GIWESPELDRNLAEDASSTEAAGGYK 279.33 2.2110999999999996e-168 31084000.0 5796.8 4244.8 5161.2 5174.9 4347.9 5617.2 4581.5 3913.5 7664.5 6489.2 7498.1 True False 6385.286868621383 4602.524193126898 5511.470068816868 5494.541819949383 4042.5185034407127 5571.4553855767235 4755.851489592997 3835.44217241864 7342.387719016719 6079.470804546202 6575.881234372083 0.9710161484130121 0.6999098720137369 0.8381340648320189 0.8355597712485215 0.6147493179028992 0.8472560843183674 0.7232264878407773 0.5832590394684763 1.1165633102736272 0.9245104325742461 1.0 12.682968527700888 -8.776412307444552 24.99970669049521 1.0550438076190949 0.7632722553905236 0.4741819412302082 0.11480276865154312 111.40464777328414 186007.28871968898 0.018334372784938716 0.019556192134277357 1.6733534851061088e-09 8.776412307444552 -0.2917715522285713 TRPGS(ph)FQSLSDALSDTPAK ddPTM_A549_MK2206_60min_R1 1 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.161)RPGS(0.708)FQS(0.13)LSDALSDTPAK 153.17 2.8886e-22 25319000.0 1682.4 1780.8 1792.9 1807.2 2130.1 1527.2 1909.7 1452.3 2591.3 2378.6 2752.5 True False 1966.347989269125 1871.4351135882112 2047.1601796352509 2249.9640811282916 1816.7651117264072 1688.8072903266866 2256.667770442807 1658.1679724822159 2004.3746874557899 1841.2726079905547 2068.978284864608 0.9503956632380995 0.9045213897499538 0.9894546475480359 1.0874759283785944 0.8780977185776961 0.8162518198866453 1.0907160248859167 0.8014429076478803 0.9687751206083606 0.8899429353416561 1.0 11.014702788012476 -8.990043356211578 21.224363325780953 0.9862247494578715 0.9403689772298597 0.0 0.09346017787470426 22.29288699063204 47527.91872115693 0.015222740172180685 0.015290694307001628 1.023190840642092e-09 8.990043356211578 -0.04585577222801185 TRPGS(ph)FQSLSDALSDTPAK ddPTM_A549_PD325901_60min_R1 1 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.18)RPGS(0.803)FQS(0.017)LSDALSDTPAK 198.6 4.392899999999999e-55 39449000.0 2467.2 2364.1 2023.1 2352.6 3013.5 2735.3 2523.4 2651.4 2967.1 3082.5 3038.5 True False 2717.668327743355 2563.331003809672 2160.3997318885913 2497.9147588577393 2801.8421560106212 2713.0246236858247 2619.4293678574645 2598.5157470169374 2842.4031053681897 2887.8704239372582 2664.783762638476 1.019845724762491 0.961928333453836 0.8107223415942462 0.9373799082235794 1.051433213941697 1.0181031052964626 0.9829800843817417 0.975131935074565 1.0666543174046692 1.0837166093649182 1.0 11.379802753021334 -6.6983557449738775 6.800458619896604 1.0241687849888255 0.9248859132100662 0.38861373667149324 0.055865491843559996 0.16555732390669886 14.194850200498538 0.007921657983127633 0.016519800627786334 2.0028307703278553e-07 6.6983557449738775 -0.09928287177875927 TRPGSFQS(ph)LSDALSDTPAK ddPTM_A549_MK2206_60min_R1 1 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.104)RPGS(0.37)FQS(0.52)LS(0.007)DALSDTPAK 110.26 1.8377999999999998e-10 24660000.0 1145.5 1875.3 1474.8 1160.8 1755.4 1570.7 1465.3 1537.1 1883.2 1684.5 2123.8 True False 1338.83239521385 1970.7447599460766 1683.9488164013999 1445.1960521102926 1497.182985364319 1736.9104314537228 1731.5260428495803 1754.9886321713254 1456.6582068524451 1303.9702800639411 1596.401846101891 0.8386562559314396 1.2344916568207809 1.0548401835748824 0.9052833756357687 0.9378484427465142 1.0880157998407025 1.084642971992069 1.0993401419928654 0.9124633690504222 0.8168183238123835 1.0 10.64060813697802 -8.770168094016485 24.99980165817361 0.9586632606174572 1.0344826325794028 0.15013440040429804 0.11214768729102521 331.86594130361084 950489.9165212251 0.017803489544951617 0.01909626184895422 1.6975864731263266e-09 8.770168094016485 0.07581937196194555 TRPGSFQS(ph)LSDALSDTPAK ddPTM_A549_PD325901_60min_R1 1 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.055)RPGS(0.3)FQS(0.64)LS(0.004)DALSDTPAK 132.26 3.8611e-17 31304000.0 1332.2 1807.3 2030.1 1856.2 1710.1 1927.7 1621.6 2065.1 1635.0 2186.1 2127.8 True False 1467.4439632861938 1959.6075137199027 2167.8747939830105 1970.853258263935 1589.988475524728 1912.0014503268972 1683.3108753735683 2023.9099604603896 1566.286635865657 2048.0692729178395 1866.0940892355286 0.7863719046917687 1.0501118486060277 1.161717839678229 1.056138203123146 0.8520408937022511 1.0246007751464317 0.9020503762825592 1.0845701576009559 0.839339583625876 1.097516617587519 1.0 10.865806013966097 -6.736549457003971 24.968678979915513 0.9367138358155032 1.026774948094925 0.0 0.11859447103498444 378.8807771744199 380077.5436587419 0.015804085077042396 0.032887513070708016 1.8342162765816838e-07 6.736549457003971 0.09006111227942193 TRPGSFQSLSDALSDT(ph)PAK ddPTM_A549_PD325901_60min_R1 2 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 TRPGSFQSLSDALS(0.086)DT(0.914)PAK;TRPGSFQSLSDALS(0.034)DT(0.966)PAK 141.64 6.1267999999999996e-21 19666800.0 6992.2 6505.3 6717.8 5987.799999999999 6733.599999999999 6383.200000000001 7194.1 6959.1 6433.7 8027.5 9041.400000000001 True False 7702.0429966144175 7053.5244613523355 7173.710305413074 6357.652806719535 6260.655165658912 6331.217335543218 7467.875412262572 6820.295291191659 6163.313962794418 7520.64228001828 7929.365118156828 0.9713316112759288 0.8895446679836985 0.9047017256131339 0.8017858569990234 0.7895531448442361 0.7984519871642513 0.9417999172673324 0.8601313206746404 0.7772771049073691 0.9484545317250374 1.0 12.952989642703054 -11.002374339198994 1.2816793203390793 1.0000083803207613 0.849942936697733 0.31406287196870386 0.0630956356109275 0.3614260520890756 1.056789137872886 0.04703050239237614 0.010707776498176716 9.945477994469347e-12 11.002374339198994 -0.15006544362302832 TRPKS(ph)PR ddPTM_A549_MK2206_60min_R1 1 TRPKSPR 7 2 O15042-2;O15042;E7ET15;E7EW00;H0Y8D9;C9J5L1;U3KPT1;C9JDJ7 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 TRPKS(1)PR 55.567 0.013041 488080000.0 10503.0 8466.7 5583.2 4896.1 10996.0 12021.0 10568.0 12740.0 11937.0 14609.0 14118.0 True False 12275.64962630386 8897.618865800374 6374.981713949208 6095.644719794279 9378.502966313124 13293.05424110601 12488.068805592293 14545.934014613686 9233.288559471986 11308.816753608859 10612.110963022182 1.1567585063026826 0.8384400518241901 0.6007270123882781 0.5744045403439999 0.8837547024331394 1.2526305357553793 1.1767751815926983 1.370691850593994 0.8700708644722345 1.065651951154143 1.0 13.3734240455062 -7.003340461530329 24.96979508804447 1.014908413265348 0.7755197781365517 0.3071967912051402 0.20301620490099292 174.81241306546792 1306734.7619549572 0.03227781033807559 0.06014861645461769 9.923378084799873e-08 7.003340461530329 -0.23938863512879638 TRPLQFR ddPTM_A549_MK2206_60min_R1 2 TRPLQFR 7 1 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 120.65 0.006675199999999999 15827900.0 1498.67 1385.29 1321.51 1096.32 1401.19 1238.6 1216.68 1186.42 1724.87 2072.16 1755.49 False True 1751.6088570363524 1455.795343948009 1508.919989396943 1364.918449215675 1195.0768071451698 1369.6678298838613 1437.735007038988 1354.598668258866 1334.18969905139 1604.0576168223774 1319.5533839407715 1.3274255353014 1.103248539744833 1.1435081049094344 1.0343791057087992 0.9056676461062458 1.0379783391509525 1.0895618354941228 1.0265584437466513 1.0110918703924718 1.215606459233919 1.0 10.365834002274882 -2.9864391859039308 0.6918583587798663 1.0093635240879806 9.053883520851173 0.472499617189272 0.07971077615926228 19.007417136576485 0.428564749199042 0.007965700203545912 219.9044343153792 0.0010317175403513972 2.9864391859039308 8.044519996763192 TRPLQFR ddPTM_A549_PD325901_60min_R1 2 TRPLQFR 7 1 P30838;C9JMC5;A8MYB8;E9PNN6;C9JKT2;I3L3W9;I3L4E5;I3L1H6 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 0 ; 98.415 0.011641 28891000.0 1652.6 1506.73 1656.35 1941.2399999999998 2112.48 2108.12 1981.77 1739.55 2250.89 1883.3200000000002 1975.9699999999998 False True 1820.370735420181 1633.707424969395 1768.7598714416836 2061.1459859240827 1964.1066924603692 2090.9521696649595 2057.187341816156 1704.8533105994252 2156.2929209808262 1764.4068537905978 1732.9382167058593 1.050453338654232 0.942738413418401 1.0206710512760908 1.1893938087660811 1.133396836382279 1.2065936047273795 1.1871094549040886 0.9837934752458627 1.2442987869929498 1.018159122339951 1.0 10.75900450462989 -6.107441437666316 5.982387705518311 1.1250007071178234 0.9931392798359162 0.26388617867815756 0.08625444006922485 0.24937548050431696 11.769662891723254 0.013911911259959848 0.037633276663764446 7.808337243727039e-07 6.107441437666316 -0.1318614272819072 TRPS(ph)STVIK ddPTM_A549_PD325901_60min_R1 1 TRPSSTVIK 9 1 Q5SSJ5;Q5SSJ5-2;Q5SSJ5-3 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 T(0.317)RPS(0.581)S(0.098)T(0.003)VIK 76.07300000000001 0.00056379 31679000.0 5769.1 6065.0 6192.5 5886.0 6344.3 6334.3 6807.8 6994.5 7030.1 6906.9 5823.7 True False 6354.774785013047 6576.118835119353 6612.76028852756 6249.564851924109 5898.698254646821 6282.715560930473 7066.8745543711 6854.989210420896 6734.649344831285 6470.797155261068 5107.421819475958 1.2442236043204031 1.2875613308544172 1.294735489305259 1.2236241831627956 1.154926783637395 1.2301148765455023 1.3836481113471435 1.3421623380079943 1.3186005743935767 1.2669400304055947 1.0 12.318379500112497 -10.723238397237916 0.95361131718826 0.9982075998267705 1.2761757207218505 0.032978648160803536 0.09717858942142336 0.24992516575989596 0.39989981920549034 0.0476054525627332 0.01202283712783248 1.8913051396541545e-11 10.723238397237916 0.27796812089507994 TRPSS(ph)TVIK ddPTM_A549_MK2206_60min_R1 1 TRPSSTVIK 9 1 Q5SSJ5;Q5SSJ5-2;Q5SSJ5-3 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 T(0.001)RPS(0.329)S(0.67)TVIK 103.46 0.00018124 7854000.0 2537.5 2424.4 2641.4 2378.8 3509.2 3132.8 2413.3 3073.2 4133.5 3745.0 3813.4 True False 2965.7679640813153 2547.7916045503484 3015.9902384341294 2961.60610678839 2993.001328609131 3464.310816615665 2851.7653717388216 3508.8355112802797 3197.26884984313 2899.0018989845416 2866.42753551415 1.0346565288451803 0.8888386582196826 1.0521773884275614 1.0332045970445816 1.0441573322635131 1.2085813346731868 0.994884865012749 1.2241145006482437 1.115419388848997 1.0113640980163654 1.0 11.485038092226146 -5.91407802279054 7.632246390584406 1.071565653727071 0.9621579190884757 0.23159629488076827 0.0806025663008361 0.2601404842074916 19.912612175570484 0.01111649291147873 0.034904103196474225 1.218770622098628e-06 5.91407802279054 -0.10940773463859532 TRPSS(ph)TVIK ddPTM_A549_PD325901_60min_R1 1 TRPSSTVIK 9 1 Q5SSJ5;Q5SSJ5-2;Q5SSJ5-3 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 T(0.007)RPS(0.275)S(0.707)T(0.01)VIK 74.53699999999999 0.00059801 25328000.0 5363.9 5699.6 6010.8 5290.7 5762.9 6375.8 6142.4 6404.2 6105.0 6440.2 6070.2 True False 5908.439179305525 6179.925294747938 6418.729033876698 5617.494522948502 5358.133784925709 6323.877598689749 6376.152393250252 6276.463207002287 5848.428080709379 6033.564672908591 5323.603882168201 1.1098570273224633 1.1608537057852948 1.2057112392183607 1.055205204460217 1.0064861893412407 1.18789409179598 1.1977135291015244 1.1789876455732848 1.0985843819633379 1.1333609348957114 1.0 12.37818751209292 -9.9051958422096 0.8671597694515701 1.0106914143973589 1.1356353733310778 0.024440245367227997 0.07006199346219079 0.4088617404463866 0.6304382051820484 0.024993161709082872 0.012965022062692223 1.2439535326971824e-10 9.9051958422096 0.1249439589337189 TRPWLQELSMGS(ph)PGPVTNK ddPTM_A549_MK2206_60min_R1 2 TRPWLQELSMGSPGPVTNK 19 1 A0A1B0GV70;Q96N21-2;Q96N21 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 TRPWLQELS(0.024)MGS(0.975)PGPVTNK;TRPWLQELS(0.002)MGS(0.997)PGPVTNK 106.12 3.3137e-10 16771100.0 3999.5 4118.5 4557.2 3206.7 5755.7 4235.200000000001 3848.6 3658.1 5571.299999999999 5646.8 5801.1 True False 4674.517821613092 4328.114058464203 5203.479486102834 3992.3416439542334 4909.044154529684 4683.366052901767 4547.84080291469 4176.646877461402 4309.409445537932 4371.183958127076 4360.52676778495 1.072007596914178 0.992566790425366 1.1933144235108286 0.9155640720862388 1.1257915421588776 1.0740367625998573 1.042956744701946 0.9578308080385998 0.9882772598428551 1.0024440144298299 1.0 12.090286713096832 -8.082109780932134 5.7021842294987835 0.9916727937777225 1.0610723827413393 0.2156881773544398 0.06687020297481096 0.2594614018559788 13.98582244556258 0.009585441895963796 0.01247221169955697 8.277329029932368e-09 8.082109780932134 0.06939958896361675 TRPWLQELSMGS(ph)PGPVTNK ddPTM_A549_PD325901_60min_R1 3 TRPWLQELSMGSPGPVTNK 19 1 A0A1B0GV70;Q96N21-2;Q96N21 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 TRPWLQELS(0.003)MGS(0.997)PGPVTNK;TRPWLQELS(0.001)MGS(0.999)PGPVTNK;TRPWLQELSMGS(1)PGPVTNK 137.52 1.4135e-17 45558000.0 9571.5 9685.2 9833.3 10179.5 11492.900000000001 12045.1 9757.8 11287.6 12621.0 11531.3 12289.3 True False 10543.191633834114 10501.405794212353 10500.646870436498 10808.264595678129 10685.678352352574 11947.008699140177 10129.138418673043 11062.459963049105 12090.583260709764 10803.21175005603 10777.794008291276 0.9782328021600075 0.9743557713325844 0.9742853558305559 1.0028271636443795 0.99145319943322 1.108483673927098 0.9398155513902727 1.0264122653057608 1.1218050049396537 1.0023583436225634 1.0 13.395774297994256 -6.950932172840171 0.8018604598531685 1.0524544767069914 0.9701911863236372 0.11571390788893898 0.05031730859397421 0.7766335127270038 0.9338184406738561 0.010197800086933592 0.03385233681214811 1.1196127284740997e-07 6.950932172840171 -0.08226329038335423 TRQEPTSESSMEDS(ph)PTTER ddPTM_A549_MK2206_60min_R1 2 TRQEPTSESSMEDSPTTER 19 1 A0A0A0MTH9;O14981 A0A0A0MTH9 BTAF1 TATA-binding protein-associated factor 172 1 T(0.003)RQEPT(0.015)S(0.015)ES(0.09)S(0.09)MEDS(0.689)PT(0.045)T(0.053)ER;TRQEPTSES(0.001)S(0.005)MEDS(0.937)PT(0.043)T(0.016)ER 62.06399999999999 0.00059302 8532800.0 519.9100000000001 539.79 344.51 238.85 408.43 729.19 505.73 420.15999999999997 790.97 822.21 880.0699999999999 True False 607.6580974208928 567.263005370497 393.366698358046 297.3682607223841 348.3504880439494 806.3524018028522 597.6145947248476 479.71896668603495 611.8165579195409 636.4721899503553 661.5243303036494 0.9185725597454122 0.8575089069061373 0.5946367810500407 0.4495197638246921 0.5265875676621771 1.2189308312102816 0.9033901964732479 0.7251720680716865 0.9248587389653651 0.9621296765580869 1.0 9.369650408354133 -7.245083380083692 24.948672928974343 0.9545520665400332 0.6634523469607204 0.42683419988883575 0.16517553504188914 634.0292570845442 967118.5318616307 0.02534902550838066 0.04382271227808417 5.687437274021295e-08 7.245083380083692 -0.2910997195793128 TRQEPTSESSMEDS(ph)PTTER ddPTM_A549_PD325901_60min_R1 2 TRQEPTSESSMEDSPTTER 19 1 A0A0A0MTH9;O14981 A0A0A0MTH9 BTAF1 TATA-binding protein-associated factor 172 1 TRQEPT(0.001)S(0.001)ES(0.004)S(0.031)MEDS(0.903)PT(0.03)T(0.03)ER;TRQEPT(0.003)S(0.003)ES(0.017)S(0.108)MEDS(0.796)PT(0.038)T(0.035)ER 57.578 0.0014034000000000002 10158500.0 464.15999999999997 680.45 399.21999999999997 702.37 715.44 712.74 753.28 726.99 560.14 681.6700000000001 664.13 True False 511.28118150346774 737.7939095394828 426.31346990488044 745.7537997019937 665.1899625340101 706.9356817481939 781.9464826106324 712.4896141373779 536.5992637393209 638.6292398654698 582.4462202669379 0.8778169789978981 1.2667159367973035 0.731936194400058 1.2803822460384602 1.142062458966856 1.213735546990419 1.3425213442921178 1.223271075243377 0.9212855111213443 1.0964604415713832 1.0 9.185981035531201 -8.769688146503865 24.945973237217864 0.9628292610691686 1.1404226375625195 0.08095020366942896 0.17720345384641895 215.70170466696186 652324.1984065832 0.02873217042865756 0.03083741146573285 1.6994635468739206e-09 8.769688146503865 0.17759337649335094 TRQS(ph)PQTLK ddPTM_A549_MK2206_60min_R1 2 TRQSPQTLK 9 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QXV1;M0QX88;M0R200;M0R073;Q8IV63-3 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 TRQS(1)PQTLK;T(0.001)RQS(0.999)PQTLK 145.09 9.0982e-06 46334000.0 10651.900000000001 10773.2 11201.4 9585.9 13422.0 10532.400000000001 10740.3 10375.5 12646.400000000001 14581.9 13346.2 True False 12449.680306048382 11321.509863942345 12789.926954189465 11934.4459303274 11447.641580015881 11646.931577158713 12691.673485304953 11846.25889863612 9782.01059215101 11287.838662430619 10031.970203618539 1.24100052665206 1.1285430114075368 1.274916760575717 1.189641285619313 1.1411159869560525 1.1609814762964166 1.2651227254170927 1.1808506861755996 0.9750836967819771 1.125186621702593 1.0 13.29231734779849 -8.740846565288125 6.9272091717630895 0.9881119237943171 1.1973843390401495 0.5625234188956427 0.06112238509257349 0.04460528306798168 8.431814195815376 0.007362628564703008 0.008219903308794678 1.8161571913849702e-09 8.740846565288125 0.2092724152458324 TRQS(ph)PQTLK ddPTM_A549_PD325901_60min_R1 2 TRQSPQTLK 9 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QXV1;M0QX88;M0R200;M0R073;Q8IV63-3 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 T(0.012)RQS(0.986)PQT(0.002)LK;T(0.002)RQS(0.998)PQTLK 104.59 0.0001682 92356000.0 9007.2 9521.2 8839.7 8402.6 10693.2 8487.6 8965.7 8730.4 8470.7 9769.6 11096.3 True False 9921.604313249814 10323.584938654312 9439.61519943433 8921.609518310826 9942.146521537343 8418.47979965481 9306.894619719287 8556.265323133699 8114.705936652735 9152.745788709632 9731.525445241183 1.0195322787859105 1.0608393305596968 0.9700036497413056 0.9167740010044968 1.0216431717186905 0.865072988507833 0.956365440555926 0.8792316653005107 0.8338575470324553 0.9405252897104039 1.0 13.248450254086602 -6.0336473653119205 0.9153208263126998 0.9180054630677471 1.0572732179767748 0.3807217732718895 0.05414776577681859 0.8746199877751082 1.0329170154303444 0.010820090908588804 0.09246802455708764 9.254493072950654e-07 6.0336473653119205 0.13926775490902765 TRQS(ph)PQTLKR ddPTM_A549_MK2206_60min_R1 2 TRQSPQTLKR 10 2 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QXV1;M0QX88;M0R200;M0R073;Q8IV63-3 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 T(0.1)RQS(0.894)PQT(0.006)LKR;T(0.035)RQS(0.955)PQT(0.01)LKR 53.754 0.0042211 17448500.0 2615.8 2888.5 2712.9 2163.0 3076.1000000000004 2608.8 2879.5 2633.7 3540.5 4392.200000000001 4518.6 True False 3057.2830898301095 3035.5123122189743 3097.6300135715724 2692.9350971007593 2623.6097648850287 2884.8614844187127 3402.6678771482766 3007.035040367977 2738.5824030167178 3399.9989694846204 3396.5069129842755 0.9001256785736633 0.8937159234432059 0.9120046250251554 0.7928542959256526 0.7724435227425592 0.8493612874422165 1.001813911857635 0.8853316414203626 0.8062937815752935 1.001028131721739 1.0 11.729836075199897 TRQS(ph)PQTLKR ddPTM_A549_PD325901_60min_R1 2 TRQSPQTLKR 10 2 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QXV1;M0QX88;M0R200;M0R073;Q8IV63-3 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 T(0.006)RQS(0.992)PQT(0.002)LKR;T(0.084)RQS(0.907)PQT(0.01)LKR 67.997 0.00088528 38979000.0 5374.4 5654.9 6564.1 5547.5 6536.2 7708.2 6090.4 7878.200000000001 6821.799999999999 6848.799999999999 6930.4 True False 5920.00513157583 6131.458268873278 7009.57929913989 5890.156475713383 6077.119860665883 7645.426974845569 6322.173504794757 7721.063120671661 6535.103469448526 6416.365599176483 6078.004735425276 0.9740046922095084 1.0087945856863934 1.1532697989333556 0.9690937621984678 0.9998544136113887 1.2578843399520026 1.0401725204237435 1.2703285793230665 1.0752053928749148 1.0556697269054582 1.0 12.56938208353873 -5.536793026020282 24.7887526934786 1.0665307348118165 0.9827021096908368 0.0974846188766767 0.0977022725659148 339.5823815562877 604978.0042591864 0.013537464335973045 0.05248396267666575 2.9054069694816843e-06 5.536793026020282 -0.08382862512097966 TRQT(ph)LNSSSR ddPTM_A549_MK2206_60min_R1 1 TRQTLNSSSR 10 1 Q14155-1;Q14155-5 Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 T(0.252)RQT(0.748)LNSSSR 43.03 0.028397000000000002 9922700.0 954.3 1099.4 962.55 997.87 890.67 579.16 443.91 564.93 1181.7 1520.5 1947.2 True False 1115.3625096050428 1155.3547640829297 1099.0540637558759 1242.3481947960863 759.6536228634145 640.4463267847063 524.562700935889 645.0105575255652 914.0468367871363 1177.017993966888 1463.656500013938 0.7620384356537353 0.7893619603178256 0.7508961725277822 0.8487976480712898 0.5190108627647132 0.43756600457730865 0.35839194574061173 0.44068438019400247 0.6244954583117227 0.8041627212092999 1.0 10.515361297387111 -10.424509169011227 0.9340273490583512 0.9839633522534079 0.6144237325613113 0.2931812227617663 0.16361304695437903 0.42171708536690944 0.6994255327355098 0.09400964461032388 0.032925755412258645 3.762624083706884e-11 10.424509169011227 -0.3695396196920966 TRQT(ph)LNSSSR ddPTM_A549_PD325901_60min_R1 2 TRQTLNSSSR 10 1 Q14155-1;Q14155-5 Q14155-1 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 T(0.002)RQT(0.998)LNSSSR;T(0.101)RQT(0.897)LNS(0.001)S(0.001)SR 84.859 0.00034656 27788000.0 6978.6 6267.9 6145.4 5650.700000000001 6806.2 5704.4 4297.8 5387.4 5970.5 7169.6 7290.2 True False 7687.062334626205 6796.117930196964 6562.463799292254 5999.73090532918 6328.155992115316 5657.945257687791 4461.355130846398 5279.944080666456 5719.580647973034 6716.910232428409 6393.551616385399 1.2023148941076498 1.0629644269673006 1.0264191474538138 0.9384034516829527 0.9897716280099331 0.8849455822312601 0.6977898042478978 0.8258233291078798 0.8945858250858393 1.0505757418481312 1.0 12.642401855258509 -5.433859271134141 0.9398308827845232 0.9174204989718417 1.295893985885084 0.510522882745493 0.08987838287388372 1.126595251882306 0.8908726883359597 0.014688705973195805 0.4054666448061218 3.682482815538446e-06 5.433859271134141 0.37847348691324223 TRRES(ph)RQES(ph)DPEDDDVK ddPTM_A549_MK2206_60min_R1 1 TRRESRQESDPEDDDVK 17 3 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 2 T(0.112)RRES(0.912)RQES(0.976)DPEDDDVK 69.398 0.00050418 8480000.0 670.54 473.83 524.09 603.16 618.78 813.16 634.0 608.73 1028.6 761.01 872.76 True False 783.710758870969 497.9459231084359 598.4138426822682 750.9342270768816 527.7582816929097 899.2080514680777 749.1895933710741 695.0193416574401 795.6237423366742 589.0973124556006 656.0296050493866 1.1946271217622417 0.7590296524361122 0.9121750574613456 1.144665151232543 0.804473270155513 1.3706821224941277 1.1420057686492278 1.0594328919121239 1.2127863380140882 0.8979736705803889 1.0 9.357617111468993 -6.2576069098756735 24.656259621620396 1.1030451032387911 0.9356525050432437 0.07734826918145277 0.17306260218754624 364.79324472007846 2346886.5155763044 0.021979154245699715 0.05579824527455679 5.525773637355967e-07 6.2576069098756735 -0.16739259819554742 TRRES(ph)RQES(ph)DPEDDDVK ddPTM_A549_PD325901_60min_R1 1 TRRESRQESDPEDDDVK 17 3 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 2 T(0.205)RRES(0.916)RQES(0.879)DPEDDDVK 44.415 0.019591 1980000.0 418.86 731.88 495.14 852.51 755.92 603.0 649.0 546.48 759.52 599.24 651.65 True False 461.3823588515652 793.5580961330835 528.7431779186982 905.167606509314 702.826786982429 598.0893679240125 673.698050146427 535.5800276947332 727.6000157019477 561.4038841330615 571.5011811497003 0.807316544689187 1.3885502293042804 0.9251830011182391 1.5838420573136356 1.2297906114009045 1.046523415263682 1.1788217983926739 0.9371459681278281 1.2731382536046911 0.9823319752439954 1.0 9.158612669906612 -7.2416914033930535 23.507961531434876 1.1149985345360245 1.2056457029715504 0.043866026714231454 0.21545343694653873 1154.4926128459215 1374303.5436897161 0.03017198804793689 0.052197772492097644 5.7320318727053174e-08 7.2416914033930535 0.0906471684355259 TRS(ph)DFLTR ddPTM_A549_MK2206_60min_R1 1 TRSDFLTR 8 1 B2RTY4-4;H3BV44 B2RTY4-4 MYO9A Unconventional myosin-IXa 1 T(0.41)RS(0.59)DFLT(0.001)R 59.418 0.0035034999999999997 6861700.0 555.53 800.03 447.15 500.01 629.99 597.98 346.25 568.81 826.08 677.38 756.33 True False 649.2898825955043 840.7481097955845 510.5625937441592 622.5124724463021 537.3193055427067 661.2578466930017 409.15914306740433 649.4405594075674 638.9741989786897 524.3593875391587 568.5123873539147 1.142085725902228 1.4788562720836467 0.8980676676554451 1.0949848873895704 0.9451320982531389 1.1631370949905977 0.7197013682882013 1.1423507628924763 1.1239406795562232 0.9223359054316091 1.0 9.151047974212148 -5.765259982035787 24.99999947327722 1.0364393359284796 1.3104709980352736 0.3799960733963542 0.1468502920984761 65.37336000942788 427782.6430514135 0.017993674296743107 0.05916893579812841 1.7168803021064574e-06 5.765259982035787 0.27403166210679397 TRS(ph)DVGVR ddPTM_A549_MK2206_60min_R1 2 TRSDVGVR 8 1 P50749-2;P50749 P50749-2 RASSF2 Ras association domain-containing protein 2 1 T(0.022)RS(0.978)DVGVR;T(0.12)RS(0.88)DVGVR 121.36 0.0009819 15906000.0 1810.2 2376.6 1780.0 1825.9 3121.9 1621.0 1606.7 1674.7 2200.0 2850.1 2641.8 True False 2115.7175048591125 2497.5587887206552 2032.430765659405 2273.2455819677652 2662.6726455559224 1792.533144067284 1898.6165925383357 1912.0938535536523 1701.7035126780904 2206.2604305195823 1985.7681500291806 1.0654403460081794 1.2577293017233426 1.0234985215315993 1.144768880462888 1.3408779093958147 0.902690046690971 0.9561119169478248 0.962898842710089 0.8569497464510568 1.1110362659846074 1.0 10.955481474331432 -7.288129971069601 24.960345022161437 0.9335251702901212 1.1623856589086958 0.47869749354664315 0.10183095001710395 368.3627533852229 344482.4344111654 0.013407981767522618 0.021438035509731206 5.150744754602205e-08 7.288129971069601 0.22886048861857466 TRS(ph)DVGVR ddPTM_A549_PD325901_60min_R1 2 TRSDVGVR 8 1 P50749-2;P50749 P50749-2 RASSF2 Ras association domain-containing protein 2 1 T(0.181)RS(0.819)DVGVR;T(0.233)RS(0.767)DVGVR 100.69 0.0019554999999999998 53255000.0 6249.7 6491.5 5690.8 6239.4 8085.099999999999 7450.4 6924.9 7191.9 6977.7 8179.200000000001 7830.3 True False 6884.164943214026 7038.561486921236 6077.0119095603795 6624.79356729447 7517.230468080798 7389.726412572245 7188.430858950684 7048.451912563599 6684.451534605381 7662.7639161289935 6867.222740361383 1.0024671113044092 1.0249502241354176 0.8849300713435982 0.9646976394631762 1.0946536543658418 1.0760866061821326 1.0467740935067438 1.026390460751631 0.9733849894395032 1.1158461296284887 1.0 12.745511043267848 TRS(ph)EGGGTGESSQGGTSK ddPTM_A549_MK2206_60min_R1 1 TRSEGGGTGESSQGGTSK 18 1 Q9H6E5;F5H0R1 Q9H6E5 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase 1 T(0.196)RS(0.802)EGGGT(0.002)GESSQGGTSK 103.02 1.8494000000000003e-09 7851400.0 918.05 1048.7 645.45 975.41 1121.9 790.0 571.77 814.01 1171.7 1246.5 1558.0 True False 1072.9943958324536 1102.0743506401382 736.9845155589121 1214.3854937878184 956.8699961719432 873.5972756404415 675.6532078892411 929.3984103010735 906.3118208204174 964.9147842681524 1171.1056013874875 0.9162234341302826 0.9410546319088874 0.6293066267343927 1.036956438726836 0.8170655106066225 0.7459594374797901 0.5769361935326323 0.7936076893492378 0.7738941900257748 0.8239349065745677 1.0 10.193655457622414 -10.685672325527024 0.9696335602667491 0.9988284377718444 0.8008558822587261 0.033213252421370965 0.13489660770173498 0.6157312613749103 1.0385325877526579 0.08273590637007527 0.022292571428801453 2.062185241826231e-11 10.685672325527024 -0.19797255551311832 TRS(ph)EITFGQVK ddPTM_A549_MK2206_60min_R1 1 TRSEITFGQVK 11 1 H7C1A4;F5H5A3;Q8IVH8-3;Q8IVH8-2;Q8IVH8 H7C1A4 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 1 T(0.138)RS(0.862)EITFGQVK 74.46 0.0011684000000000002 12092000.0 2535.7 3584.4 3362.3 2798.2 3466.7 2890.8 2802.5 3179.8 4316.3 3883.3 3824.6 True False 2963.664168087089 3766.830649789748 3839.1246985261873 3483.7591256159726 2956.753022309721 3196.7025372422627 3311.6779738524215 3630.5463877290863 3338.664941714748 3006.0598329310205 2874.8462664098756 1.0308948352177905 1.3102720287348748 1.335419129496795 1.2118071029817226 1.0284908298773594 1.1119559938188706 1.1519495885907192 1.262866272241727 1.1613368619825684 1.045641941989825 1.0 11.489269094069305 -11.9730498440559 0.27720286248452414 0.7916787442149059 1.2030285686638698 0.25795099778048736 0.09737126555332269 7.984408935702816 0.4376260618895518 1.1303407657373097 0.05023009886602921 1.0640208933467535e-12 11.9730498440559 0.41134982444896384 TRS(ph)EITFGQVK ddPTM_A549_PD325901_60min_R1 4 TRSEITFGQVK 11 1 H7C1A4;F5H5A3;Q8IVH8-3;Q8IVH8-2;Q8IVH8 H7C1A4 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 1 T(0.136)RS(0.864)EITFGQVK;T(0.082)RS(0.917)EIT(0.001)FGQVK;T(0.146)RS(0.834)EIT(0.02)FGQVK;T(0.037)RS(0.944)EIT(0.019)FGQVK 120.13 3.5164999999999997e-06 71784300.0 15348.7 15483.0 16142.400000000001 16707.7 19525.7 18518.3 17539.4 19475.2 17841.3 17924.899999999998 18605.199999999997 True False 16906.88872488427 16787.806747593222 17237.92033613682 17739.69668306022 18154.28219200817 18367.4931045228 18206.87146492795 19086.75185800116 17091.492205792023 16793.118754917432 16316.878348080096 1.0361595131260875 1.0288614273801053 1.0564471934158348 1.0871991752728571 1.112607559162459 1.1256744527168696 1.115830557569257 1.1697551119051506 1.047473164976012 1.0291869802959812 1.0 13.994077455086954 -9.178321562036 2.5618179244640165 1.0170335544247333 1.0910177413381204 0.34442453804284845 0.04027505203021741 0.20758541136292483 2.8235424968951124 0.008808646515854626 0.008335567933811691 6.63251801031808e-10 9.178321562036 0.07398418691338704 TRS(ph)EREWDR ddPTM_A549_MK2206_60min_R1 2 TRSEREWDR 9 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.033)RS(0.967)EREWDR;T(0.006)RS(0.994)EREWDR 94.68799999999999 0.00030895 35615000.0 2243.8 2511.1 1871.3 1716.79 4059.8999999999996 3820.7 3389.6 3627.2 4872.700000000001 4631.9 4929.4 True False 2622.4985843569066 2638.9042642247064 2136.6784785272157 2137.403627069632 3462.694088117011 4225.003938024597 4005.4464443069287 4141.3667078341205 3769.041230102971 3585.5505730057416 3705.293935481052 0.7077707275108344 0.7121983600154254 0.576655594868431 0.576851300946017 0.9345261532314724 1.140261477656852 1.0810063962676981 1.1176891172323293 1.017204382629807 0.9676831677701261 1.0 11.855372278594118 -6.876375789320344 4.645418986450239 1.0318918559469268 0.6446190938846106 0.8968592541397361 0.06482416942132294 0.051917193104942846 1.8910595215206591 0.009949870010594665 0.019277191870231466 1.3293036911425096e-07 6.876375789320344 -0.3872727620623162 TRS(ph)EREWDRDK ddPTM_A549_MK2206_60min_R1 2 TRSEREWDRDK 11 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.03)RS(0.97)EREWDRDK;T(0.051)RS(0.949)EREWDRDK 97.45 8.2192e-05 208385000.0 4090.2 3256.5 2497.55 2498.7 7213.2 6156.6 7309.1 7004.8 10210.7 9041.6 9314.3 True False 4780.525764210989 3422.2419403638874 2851.7401453778925 3110.881612170904 6152.14783526826 6808.087325579671 8637.068859477156 7997.751851300308 7897.992753137358 6999.096280336078 7001.302248397614 0.6828052260285016 0.4888007714774969 0.4073156741705544 0.4443289979207641 0.8787147900487084 0.9724030021897478 1.2336374795780198 1.1423234660567256 1.1280748170734907 0.9996849203214958 1.0 12.773407574229703 -6.956806500793066 2.567117761524964 1.0775530990231101 0.4956625552810418 0.881095382986243 0.09805941806579013 0.07016827738207337 0.9358353015434192 0.015396266770902367 0.03086168753067166 1.1045706499563928e-07 6.956806500793066 -0.5818905437420683 TRS(ph)EREWDRDK ddPTM_A549_PD325901_60min_R1 2 TRSEREWDRDK 11 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;G3V3B0;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.056)RS(0.944)EREWDRDK;T(0.027)RS(0.973)EREWDRDK 95.428 8.3891e-05 355000000.0 10014.6 9761.7 10281.1 9019.3 7950.4 10399.5 7765.799999999999 8352.5 13009.900000000001 13647.9 15679.0 True False 11031.274819641132 10584.352717689137 10978.837271276654 9576.401676683501 7391.991331391029 10314.80991994324 8061.331768608817 8185.902835090512 12463.139146145937 12786.169264834822 13750.582397369977 0.8022405524984195 0.7697385035642975 0.7984270741417131 0.6964360781195089 0.5375765998685894 0.7501362212786068 0.5862538426118357 0.5953131728192254 0.906371729282515 0.9298638337878972 1.0 13.74720510393247 -8.892643514324053 5.06309674198206 0.9596494463873078 0.6920220007695167 0.6373723667713764 0.08557503330580435 0.09624308457265544 3.8553222965701566 0.01626181717098863 0.017170318529123395 1.2804319008464892e-09 8.892643514324053 -0.26762744561779106 TRS(ph)ESEK ddPTM_A549_PD325901_60min_R1 1 TRSESEK 7 1 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 T(0.068)RS(0.932)ESEK 70.55199999999999 0.0059058 4641700.0 1856.6 2302.1 1830.9 2109.8 1934.5 1781.9 1343.7 1109.5 2158.5 2447.9 2750.4 True False 2045.080665243317 2496.106046220653 1955.155884096102 2240.117554296548 1798.627393662701 1767.388797187062 1394.8352388008539 1087.370152114088 2067.785751385946 2293.3391762387723 2412.1182362221043 0.8478359951568348 1.0348191099164739 0.8105555750692787 0.9286930966555991 0.7456630303826807 0.7327123399867714 0.5782615536232858 0.4507947146973787 0.8572489193666322 0.9507573641293117 1.0 11.236084911066973 -4.235402739057994 16.266597532895272 0.8544122303746534 0.8067516598524905 0.0 0.17485597181780838 0.0 0.0 0.025713426803971456 0.0 5.8156365983489835e-05 4.235402739057994 -0.04766057052216288 TRS(ph)ESEKSTEVVPK ddPTM_A549_MK2206_60min_R1 2 TRSESEKSTEVVPK 14 2 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 T(0.049)RS(0.941)ES(0.008)EKS(0.001)T(0.001)EVVPK;T(0.019)RS(0.897)ES(0.061)EKS(0.019)T(0.004)EVVPK 82.01 0.00013401 21731000.0 5946.2 8026.900000000001 8271.8 8081.9 12925.3 7292.0 6961.9 7101.6 14194.7 18221.2 17936.5 True False 6949.77318936761 8435.434924338055 9444.86562212442 10061.965862810272 11024.00549204137 8063.634599962148 8226.787113706749 8108.273547737876 10979.623114278042 14105.018264826998 13482.372027783484 0.5154711036786426 0.6256640083032072 0.7005344165448879 0.7463053120085479 0.8176606808745455 0.598087234452899 0.6101884072590186 0.6013981464855694 0.8143687988769365 1.0461822471417055 1.0 13.718786719664687 -9.417857346502693 0.9212026567179205 0.965303751730215 0.6578891613165416 0.7082270803011361 0.08828083487619565 0.20893775505262074 0.37595843546335994 0.026768695351095637 0.01964223186191207 3.8206974937539176e-10 9.417857346502693 -0.30741459041367336 TRS(ph)ESEKSTEVVPK ddPTM_A549_PD325901_60min_R1 3 TRSESEKSTEVVPK 14 2 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 T(0.075)RS(0.535)ES(0.39)EKSTEVVPK;T(0.082)RS(0.915)ES(0.003)EKSTEVVPK;T(0.004)RS(0.994)ES(0.002)EKSTEVVPK 184.8 1.4902e-26 82795000.0 15888.100000000002 15152.8 16395.1 18303.7 18987.7 24705.9 20629.3 24432.2 22873.6 21966.9 22535.9 True False 17501.048215798975 16429.779634756218 17507.77007774538 19434.27797828122 17654.06945600894 24504.703341615033 21414.359300286116 23944.8806043099 21912.302137086677 20579.90618510538 19764.12716684036 0.8854956289272259 0.8312929529375622 0.8858357330911821 0.9833107131028508 0.8932380017078816 1.2398576033617241 1.0834963324975193 1.2115324093079038 1.108690606577884 1.0412757422262344 1.0 14.270596623101818 -7.216528439935356 24.290633049691476 1.0803358126203908 0.8965531416855449 0.6597763455200361 0.07597078545297739 199.57705316065255 107943.59876168177 0.012640775498910704 0.021894400421304517 6.073954860423309e-08 7.216528439935356 -0.1837826709348459 TRS(ph)HRDSEDI ddPTM_A549_MK2206_60min_R1 2 TRSHRDSEDI 10 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.265)RS(0.729)HRDS(0.006)EDI;T(0.231)RS(0.672)HRDS(0.097)EDI 67.118 0.0015561 10282400.0 1646.89 1754.87 1542.93 1493.98 2114.39 1350.3 1288.31 1314.21 2087.79 2331.6 3027.63 True False 1924.8447694052718 1844.185387344197 1761.740674864531 1860.0051670673115 1803.3660319154958 1493.1878497434022 1522.3792508452502 1500.5032920993283 1614.9088985155408 1804.8899406334738 2275.785912662901 0.8457934284130477 0.810350998783674 0.7741240795374795 0.8173023467268572 0.7924146212001876 0.6561196470349097 0.668946600984937 0.6593341156346235 0.7096049279195745 0.7930842398622501 1.0 11.152149131732445 -10.699460082230846 0.9742340571863415 0.999005646756957 0.7461672969818103 0.18624270143897614 0.08701158911520704 0.28160341087065505 0.47812864110535286 0.04868214560023131 0.012949043395682092 1.9977443808015787e-11 10.699460082230846 -0.25283834977514674 TRS(ph)IGSAVDQGNESIVAK ddPTM_A549_PD325901_60min_R1 2 TRSIGSAVDQGNESIVAK 18 1 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 T(0.204)RS(0.782)IGS(0.014)AVDQGNESIVAK;T(0.18)RS(0.803)IGS(0.017)AVDQGNESIVAK 212.82 4.6752e-56 27836000.0 7775.1 8473.9 8312.0 9197.8 9975.0 9127.6 8948.3 10415.400000000001 8844.0 9449.2 10947.099999999999 True False 8564.422428273896 9188.025292154638 8876.102304116444 9765.92721628059 9274.390411881852 9053.26785184613 9288.83245319765 10207.656676276763 8472.317435838457 8852.57589938944 9600.676099384453 0.8920645108340863 0.9570185679677006 0.9245288781990609 1.0172124457887641 0.9660143010632845 0.9429823231331157 0.9675185744255245 1.0632226908406197 0.882470916436985 0.9220783836210267 1.0 13.228920291629555 -4.755850855880642 1.562994353747084 0.9581939048791969 0.7324490680607781 0.14867831469734882 0.047526149441182476 8.544185268685176 6.471613541407915 0.00772144668645491 4.38132145789304 1.7544829177015728e-05 4.755850855880642 -0.22574483681841873 TRS(ph)LDFR ddPTM_A549_MK2206_60min_R1 2 TRSLDFR 7 1 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 1 T(0.022)RS(0.978)LDFR;T(0.019)RS(0.981)LDFR 73.985 0.015608000000000002 45270000.0 4822.9 6005.7 4876.7 4500.1 7129.8 5939.299999999999 5506.0 6331.1 8246.6 7497.299999999999 8109.1 True False 5636.887611415871 6311.364477581269 5568.289390388328 5602.624702017168 6081.0158647889475 6567.792783811734 6506.3689291815945 7228.552813180585 6378.758267114154 5803.654722899009 6095.386670225469 0.9247793317117586 1.035432995319362 0.9135252104002052 0.9191582101566538 0.9976423472022342 1.0775022388479238 1.0674251333329972 1.1859055387725221 1.0464895194053707 0.9521388940341551 1.0 12.573502027988694 -7.000685602767177 5.81281710495098 1.0432720565301006 0.9523055614315471 0.3846733567085695 0.06221212009546774 0.14953383589002425 19.155496589829916 0.009078047952331044 0.01673116063984254 9.984225867147917e-08 7.000685602767177 -0.09096649509855348 TRS(ph)LDFR ddPTM_A549_PD325901_60min_R1 2 TRSLDFR 7 1 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 1 T(0.007)RS(0.993)LDFR;T(0.028)RS(0.972)LDFR 80.688 0.013087 69629000.0 10329.9 9863.9 9188.4 10576.8 10435.9 10336.0 9341.6 11264.3 10134.5 11516.4 10672.099999999999 True False 11378.583843529545 10695.165470360063 9811.980078337772 11230.104914344352 9702.918385900539 10251.827042889874 9697.09969991966 11039.624699827598 9708.582208673084 10789.252538598885 9359.499356015825 1.2157256932996048 1.1427070042465186 1.048344543346874 1.199861711313244 1.0366920298641809 1.0953392540489364 1.0360703421264559 1.1795101724892871 1.037297171502329 1.1527595791396774 1.0 13.192215646104279 -2.00000000061785 0.09404633928363734 0.9277786939133532 1.62051707906537 0.0 0.07383720848139984 75.6845483698475 0.4934299357064307 0.4389210034343615 6.782771569762356 0.009999999985773472 2.00000000061785 0.6927383851520168 TRS(ph)LPDR ddPTM_A549_MK2206_60min_R1 1 TRSLPDR 7 1 Q08495-2;Q08495;Q08495-3;Q08495-4 Q08495-2 DMTN Dematin 1 T(0.232)RS(0.768)LPDR 83.86200000000001 0.0039923 13395000.0 1823.2 1417.6 1372.4 896.94 1639.4 1432.9 1331.6 1236.9 1951.8 1914.6 1916.6 True False 2130.9115870396263 1489.7497849408408 1567.0269566241384 1116.6903402651665 1398.2464317000488 1584.52852691796 1573.5344834904138 1412.2343628473823 1509.7204163841357 1482.0905302525507 1440.655324530974 1.479126582712194 1.0340778669081379 1.0877181584945077 0.7751266533018375 0.9705627764609609 1.0998664982089494 1.092235218720828 0.9802721989086151 1.04794005247275 1.0287613595119058 1.0 10.492509497988886 -5.255197337813783 4.4984727610252 1.014465437509036 1.5124736695434104 0.7114231240970368 0.08564357805215171 0.08360502333965979 4.213592349256797 0.011478277420791643 0.13195028499462522 5.5565171892188035e-06 5.255197337813783 0.4980082320343744 TRS(ph)LPDR ddPTM_A549_PD325901_60min_R1 2 TRSLPDR 7 1 Q08495-2;Q08495;Q08495-3;Q08495-4 Q08495-2 DMTN Dematin 1 T(0.191)RS(0.809)LPDR;T(0.04)RS(0.96)LPDR 83.86200000000001 0.0039923 62669000.0 5496.4 5259.0 6152.6 6126.200000000001 6671.7 5917.299999999999 6041.3 6233.9 6826.299999999999 6119.799999999999 7874.3 True False 6054.39048176418 5702.194386462107 6570.152434589373 6504.601460390328 6203.1028081155055 5869.111470674558 6271.204977426209 6109.559974100053 6539.414350097696 5733.394783588395 6905.811019300366 0.8767095515419354 0.8257095901590139 0.9513947625017694 0.9419026153787387 0.8982439268579852 0.8498801160749347 0.908105501279928 0.8846984021174414 0.9469437162154215 0.8302275818965649 1.0 12.753595139379215 -9.267413910476412 0.8627175358305825 0.9899143560061829 0.891099114374488 0.0 0.0596862715774696 0.2765783426327466 0.4388610092972173 0.010629455303703166 0.008328488593947128 5.402391949313431e-10 9.267413910476412 -0.09881524163169497 TRS(ph)LPITIEMLK ddPTM_A549_PD325901_60min_R1 1 TRSLPITIEMLK 12 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 T(0.096)RS(0.903)LPITIEMLK 102.29 5.9439e-05 3637500.0 1120.3 1227.7 1295.2 1182.2 1483.8 1435.5 1336.4 1232.5 1161.5 1308.5 1067.3 True False 1234.0320312787294 1331.1625876135242 1383.1000606703099 1255.2218090289982 1379.5830068321095 1423.8097639385078 1387.2574333061402 1207.9168206224542 1112.6861942250525 1225.8810866899935 936.0288661721395 1.3183696314038524 1.422138393078914 1.4776254351283566 1.3410075846936091 1.4738680148550019 1.521117366562778 1.4820669355842473 1.29046962575224 1.1887306411557024 1.3096616258248481 1.0 9.870409211507809 -8.971333984932253 0.9822607418637215 1.0502430643179994 1.4374312528969415 0.508108023104294 0.10322047867235694 0.13014890062654214 0.25794021004315865 0.018008431473746155 0.017045012512868288 1.068233061351833e-09 8.971333984932253 0.3871881885789421 TRS(ph)LSSLR ddPTM_A549_PD325901_60min_R1 1 TRSLSSLR 8 1 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 T(0.114)RS(0.884)LS(0.002)SLR 49.5 0.0092721 4114200.0 575.84 426.98 502.86 696.12 697.63 475.41 565.16 580.78 566.28 573.19 545.0 True False 634.2988528889969 462.9631030864404 536.9871035428288 739.1177513967734 648.6308754928458 471.5384185816833 586.6674730674183 569.1958872869036 542.4812208917457 536.9986855787829 477.9684550396478 1.3270726262392805 0.9686059785013162 1.1234781247190997 1.5463734972540462 1.3570579159644363 0.9865471530805707 1.2274188116007654 1.1908649645920428 1.1349728526472453 1.1235023565189852 1.0 8.900771596140563 -9.59151179247936 0.4911829793530035 0.99780151072424 1.2275959430999164 0.12006012746914718 0.15810808192874823 1.0959743773781154 0.5847777776033029 0.10353717727686276 0.049051252532564246 2.56146371124005e-10 9.59151179247936 0.22979443237567643 TRS(ph)LVGGLLQSK ddPTM_A549_PD325901_60min_R1 1 TRSLVGGLLQSK 12 1 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.269)RS(0.731)LVGGLLQSK 135.15 1.0804e-08 14424000.0 1845.8 1567.1 1900.1 1721.4 1803.2 2251.5 2132.3 1870.8 2384.8 2142.3 1861.4 True False 2033.1842571938582 1699.1650167379287 2029.0522122295054 1827.7269684169482 1676.5494527022904 2233.164530482447 2213.4458433393324 1833.4854263857906 2284.575149365395 2007.0348123927938 1632.4596003867896 1.245472939552147 1.040861909437351 1.2429417620802061 1.1196154367213085 1.0270082348776377 1.367975372838218 1.3558962456497459 1.1231429102143604 1.3994681086282903 1.229454506511067 1.0 10.672831573497911 -5.844298178088882 17.663518177584216 1.198228071484342 1.142426963476472 0.029236072656053325 0.1343389556824693 10.955431298305367 2323.710427102262 0.022988953465828296 0.07147849709517975 1.43120492458474e-06 5.844298178088882 -0.05580110800786997 TRS(ph)NPEGAEDR ddPTM_A549_MK2206_60min_R1 4 TRSNPEGAEDR 11 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 T(0.027)RS(0.973)NPEGAEDR;T(0.035)RS(0.965)NPEGAEDR;T(0.122)RS(0.878)NPEGAEDR;T(0.407)RS(0.593)NPEGAEDR 167.29 2.9853000000000002e-15 398854100.0 5972.96 6156.9400000000005 4733.46 4909.21 8147.81 6975.09 6820.290000000001 7835.42 10262.990000000002 10770.220000000001 11418.62 True False 6981.049623148422 6470.3019475830015 5404.735804504585 6111.966670382813 6949.277942338644 7713.189394109979 8059.448409736284 8946.114779967367 7938.439151627325 8337.219821757355 8583.06151612015 0.8133519269362182 0.7538454589228913 0.6296978990950677 0.7120963375252192 0.8096502546657693 0.8986524656293756 0.9389945993745414 1.0422988071523611 0.9248959869060549 0.9713573421440508 1.0 13.067276623098333 -7.252351178713837 1.7354952334560667 0.9689767036944064 0.7227183868769694 0.8333102945326565 0.05045044099902559 0.11172966052413896 0.6558848387986713 0.008507716032516426 0.01614050997949797 5.593051538885895e-08 7.252351178713837 -0.24625831681743693 TRS(ph)NPEGAEDR ddPTM_A549_PD325901_60min_R1 6 TRSNPEGAEDR 11 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 T(0.027)RS(0.973)NPEGAEDR;T(0.209)RS(0.791)NPEGAEDR;T(0.17)RS(0.83)NPEGAEDR;T(0.156)RS(0.844)NPEGAEDR;T(0.122)RS(0.878)NPEGAEDR;T(0.016)RS(0.984)NPEGAEDR 191.51 1.0015e-19 1256989000.0 8678.66 8786.210000000001 9022.8 8608.42 10737.529999999999 9078.92 9385.55 8903.93 9821.439999999999 9948.79 10419.37 True False 9559.71117430818 9526.654751906679 9635.141466504068 9140.142552259682 9983.362935267538 9004.984285626337 9742.72224122002 8726.334131152043 9408.679031777618 9320.621701528884 9137.853543828356 1.0461659435070223 1.042548417548333 1.0544206492575685 1.0002504973865411 1.0925282274862276 0.9854594673065472 1.0661937395352752 0.9549654182240369 1.0296377575598348 1.0200012132853638 1.0 13.157639604721497 -7.288404822506251 24.990247458514617 1.0119686405703545 1.0447200607543976 0.24529070326438351 0.032719894912524014 867.8646546961594 804292.0807141463 0.00447814250402131 0.007159652572524854 5.1474860401211824e-08 7.288404822506251 0.03275142018404309 TRS(ph)PDVISSASTALSQDIPEIASEALSR ddPTM_A549_MK2206_60min_R1 1 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.275)RS(0.725)PDVISSASTALSQDIPEIASEALSR 292.22 5.209e-185 156760000.0 4335.9 5572.8 5472.9 4573.4 7961.7 5015.5 5273.4 5577.4 8535.5 7343.7 7572.6 True False 5067.693917422727 5856.431716646668 6249.039515380536 5693.883205307724 6790.544476800217 5546.236880980549 6231.508520004763 6368.013530071141 6602.222878392654 5684.753069578844 5692.114426872204 0.8903007805848707 1.0288675310177762 1.0978415131430097 1.0003107418971007 1.1929739930635226 0.9743719934365737 1.09476163911711 1.1187430632118092 1.1598893457278145 0.9987067446749476 1.0 12.474748948884486 -5.280821075650986 2.4137044939412458 1.078377610934949 0.8510982621837546 0.3613191705986939 0.06849428106711104 0.43384383793299003 3.140237424536233 0.009965139041985892 0.20040678329893247 5.238161984071877e-06 5.280821075650986 -0.22727934875119438 TRS(ph)PDVISSASTALSQDIPEIASEALSR ddPTM_A549_PD325901_60min_R1 1 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.251)RS(0.749)PDVISSASTALSQDIPEIASEALSR 252.37 2.6036999999999994e-138 241590000.0 7194.2 7416.6 7420.3 7964.4 9363.1 7896.9 8315.4 8723.9 8498.4 9662.2 8722.1 True False 7924.549887909876 8041.622910559966 7923.88617988875 8456.34289953523 8705.468156941453 7832.5902646088525 8631.847097361479 8549.894970732848 8141.241801982084 9052.127043038634 7649.33699394736 1.035978659873435 1.0512836494094857 1.0358918931351346 1.1055001114771679 1.1380683272066288 1.0239567521742727 1.1284438251565518 1.1177302003426006 1.0643068554077237 1.1833871419446222 1.0 12.90111899233718 -10.10887795071055 0.8962553335270081 1.0054539533295572 1.0789111760578807 0.0 0.06549349748212471 0.43239058486054704 0.6931892276446149 0.01681325101175671 0.007609368417243808 7.782552325025247e-11 10.10887795071055 0.07345722272832345 TRS(ph)PFAK ddPTM_A549_MK2206_60min_R1 1 TRSPFAK 7 1 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 T(0.033)RS(0.967)PFAK 54.982 0.011472 10878000.0 2158.1 2123.7 1894.5 1651.3 2516.5 2292.2 2411.0 2199.3 2805.1 2960.6 3225.3 True False 2522.334519520741 2231.7872589438925 2163.1685873830024 2055.868574129674 2146.326183587393 2534.7590825607845 2849.0474915105046 2511.0575100737724 2169.749328824234 2291.798403774001 2424.3689962484364 1.0404086685747511 0.9205641807816581 0.892260456527193 0.8480015118618518 0.8853133276777184 1.0455335332547027 1.1751707334647623 1.0357571450383507 0.8949748706495543 0.9453174856304547 1.0 11.243393582706906 -7.239853141951712 24.648339100059896 0.9810387496124842 0.9122483665393879 0.20176072492029506 0.08291854080939011 1266.673770257492 1446357.0319074586 0.014176527493727291 0.02454072594996981 5.756345570699835e-08 7.239853141951712 -0.06879038307309626 TRS(ph)PFAK ddPTM_A549_PD325901_60min_R1 2 TRSPFAK 7 1 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 T(0.023)RS(0.977)PFAK;T(0.011)RS(0.989)PFAK 60.828 0.0079441 28239000.0 5338.1 5068.0 5695.5 4936.6 5943.6 6124.0 5350.1 5956.6 6499.0 5819.7 5813.3 True False 5880.019982298476 5495.098146147547 6082.030879823773 5241.5225701679465 5526.142040306867 6074.1281744057305 5553.700983187057 5837.790940137702 6225.869630881291 5452.243148803786 5098.300953544927 1.15332932203816 1.0778292996467225 1.1929525022634928 1.0280920286832882 1.0839183662675809 1.1914024357825121 1.08932388138552 1.1450463582536445 1.2211655780250377 1.0694235586490353 1.0 12.31580082306174 -11.062988266937921 1.392911989926914 1.0004582121472627 1.1394855362164147 0.2561799050794329 0.05895762857099672 0.3287924162762967 1.1443819287451984 0.042163762064641466 0.0094798792769836 8.649912873880105e-12 11.062988266937921 0.13902732406915197 TRS(ph)QEQEVLER ddPTM_A549_MK2206_60min_R1 1 TRSQEQEVLER 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.426)RS(0.574)QEQEVLER 83.823 0.00015983 8528800.0 437.78 616.88 382.41 345.57 607.84 404.93 334.64 372.58 569.39 573.07 721.15 True False 511.66656130660783 648.2765570924845 436.64148825607475 430.23466551322656 518.427541200779 447.7794238292203 395.43975634967865 425.3943559783961 440.4240741289902 443.61308898559986 542.0685522725205 0.9439148594057744 1.1959309470632578 0.8055097209117508 0.7936905096404294 0.9563874145204865 0.8260568187399717 0.7295013789157696 0.7847611786277036 0.8124877790504449 0.8183708262097762 1.0 9.082331502183552 -5.77203336759938 24.99859708859915 0.8733816370427809 1.069922929776559 0.42718335928748463 0.09684316401611365 160.02943193445122 377624.2940206066 0.01532954198199687 0.048380704957475804 1.6903110571196304e-06 5.77203336759938 0.19654129273377796 TRS(ph)QEQEVLER ddPTM_A549_PD325901_60min_R1 1 TRSQEQEVLER 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.341)RS(0.659)QEQEVLER 115.04 6.0546000000000004e-06 13106000.0 670.18 395.59 780.97 577.77 505.95 612.15 560.65 592.11 796.28 658.46 748.42 True False 738.2161802395595 428.9277576232256 833.9713205541174 613.4575406891255 470.41381743274417 607.164853357686 581.9858425494517 580.2999015486911 762.8151207382907 616.8847232265138 656.3690846252721 1.124696756034777 0.6534856190981404 1.2705828779706165 0.9346228441568889 0.7166910027478035 0.9250357269710877 0.8866746715862059 0.8841060847343082 1.1621740551259963 0.9398442700553145 1.0 9.358363478431091 -8.749875721608984 24.997972950443625 1.0765821950711543 0.9191593049792457 0.06171007962199193 0.16835185635476183 286.24922811037123 618804.4879973846 0.02672252607006461 0.030175313322584222 1.7787883580849641e-09 8.749875721608984 -0.15742289009190857 TRS(ph)RS(ph)PESQVIGENTK ddPTM_A549_MK2206_60min_R1 2 TRSRSPESQVIGENTK 16 2 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 T(0.03)RS(0.819)RS(0.899)PES(0.252)QVIGENTK;T(0.051)RS(0.966)RS(0.926)PES(0.057)QVIGENTK 93.73 6.1436e-06 36264000.0 6098.4 6535.1 5092.1 5095.8 8290.2 7510.5 6043.5 6264.2 9000.900000000001 9079.4 8718.4 True False 7127.660828434871 6867.708676331046 5814.236349333851 6344.271228759158 7070.722561961537 8305.256124933585 7141.525721668907 7152.1695333079315 6962.2105214837375 7028.35723408284 6553.380664400943 1.0876311316926108 1.0479642535703115 0.8872117533043292 0.9680913643888104 1.0789427509332523 1.2673239279459412 1.0897468173126073 1.0913709884365042 1.0623845734009665 1.0724780985579014 1.0 12.67802362024991 -5.272695773499044 6.979896299383183 1.04368425211667 1.0881436846206545 0.0 0.08992472822581081 0.4800848341425443 160.03701251895532 0.012908564811289623 0.09347508030930073 5.337086314188964e-06 5.272695773499044 0.04445943250398443 TRS(ph)RSPES(ph)QVIGENTK ddPTM_A549_PD325901_60min_R1 2 TRSRSPESQVIGENTK 16 2 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 T(0.214)RS(0.627)RS(0.547)PES(0.612)QVIGENTK;T(0.125)RS(0.647)RS(0.488)PES(0.74)QVIGENTK 86.182 1.2458e-05 28871000.0 5413.3 5410.6 6072.1 6619.9 5372.4 5441.1 4899.7 6382.4 5623.7 6743.9 6591.4 True False 5962.854230939166 5866.570250502349 6484.189220503546 7028.796188116278 4995.061157773842 5396.7894855909535 5086.160764718715 6255.098025104062 5387.355445943545 6318.089003078829 5780.699586327217 1.0315108304612108 1.0148547183420908 1.1216962797790522 1.215907535610589 0.8640928460611231 0.9335876056170942 0.879852116298993 1.082065921553667 0.9319556163558426 1.0929626957302314 1.0 12.497028384420885 -6.768788210543119 24.999912314902794 0.9605673559059021 1.0920327960174945 0.3435280181879816 0.08369776961255275 125.08195590520597 425516.6033004837 0.010745208277504576 0.020601006471671197 1.702988790971511e-07 6.768788210543119 0.13146544011159234 TRS(ph)TGQLELGR ddPTM_A549_MK2206_60min_R1 2 TRSTGQLELGR 11 1 E7EUN2 E7EUN2 AGAP1 1 T(0.176)RS(0.783)T(0.04)GQLELGR;T(0.188)RS(0.791)T(0.021)GQLELGR 149.3 3.3666e-12 9957900.0 1166.46 1250.53 1438.41 1284.04 2355.67 1732.51 1549.76 1717.0900000000001 3115.9 3083.36 3134.7 True False 1363.329930791049 1314.176635554507 1642.3981672090697 1598.629857642745 2009.15406353718 1915.8430582529375 1831.331331581633 1960.4927658675833 2410.153625069848 2386.826834513478 2356.2674766812306 0.5785972705914016 0.5577366103637377 0.697033839945185 0.678458567825412 0.8526850552497737 0.8130838613243414 0.7772170815518098 0.8320331988068306 1.0228692832719126 1.0129693925391228 1.0 11.202287603702418 -6.915336931843264 0.36291030371194294 1.031521067766322 0.4740786490454099 0.8687596618178997 0.05702509849266265 0.5456730215353772 0.10948567474423615 0.023483783723887014 0.11493074370515784 1.2152428321380847e-07 6.915336931843264 -0.5574424187209122 down TRS(ph)TGQLELGR ddPTM_A549_PD325901_60min_R1 1 TRSTGQLELGR 11 1 E7EUN2 E7EUN2 AGAP1 1 T(0.221)RS(0.757)T(0.022)GQLELGR 95.822 7.909699999999999e-05 13507000.0 1680.2 1587.2 1566.8 1595.6 2126.7 2016.3 2013.8 1724.2 2004.9 2186.1 2249.7 True False 1850.772667102134 1720.9589142788848 1673.132469933787 1694.1565881294782 1977.3279287167045 1999.879921302135 2090.436260993644 1689.809478391266 1920.6410252275575 2048.0692729178395 1973.0011620232956 0.9380494561919986 0.8722543845407857 0.8480139303202457 0.8586698379802956 1.0021929874024869 1.0136232860862968 1.0595210490651306 0.8564665398667992 0.9734616796971153 1.0380476769803633 1.0 10.946176090416794 -6.761815258635406 24.999999844399806 0.985525632032399 0.8765164990605655 0.5058704288708304 0.053298336773454594 6.266802608895195 416857.3641096822 0.007235987184572997 0.014301425230011135 1.730552349717267e-07 6.761815258635406 -0.10900913297183346 TRS(ph)WAGER ddPTM_A549_MK2206_60min_R1 1 TRSWAGER 8 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 T(0.286)RS(0.714)WAGER 58.674 0.0039361 12569000.0 919.16 762.66 600.94 515.2 1249.1 1089.6 953.94 910.01 1439.7 1820.4 1733.1 True False 1074.2917366955587 801.4761364157604 686.1623282670578 641.4240231282066 1065.3590446727646 1204.9007487820563 1127.2585500006346 1039.006704288743 1113.6102487284763 1409.170375677292 1302.723438873335 0.8246506546505863 0.6152312244484677 0.5267137350813982 0.4923715993649001 0.8177937180543433 0.9249090887810532 0.8653091794951876 0.7975650650665591 0.8548324344970611 1.081711078213207 1.0 10.347315124734665 -6.93543271885912 5.159812605469143 0.9114726865562359 0.6097332574674198 0.6459044418226079 0.10563167211690185 0.09542259497639152 4.982870512359305 0.015039676113173955 0.028738141674847388 1.1602919552952797e-07 6.93543271885912 -0.3017394290888161 TRS(ph)WAGER ddPTM_A549_PD325901_60min_R1 2 TRSWAGER 8 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2;P30305-3 CDC25B M-phase inducer phosphatase 2 1 T(0.078)RS(0.922)WAGER;T(0.242)RS(0.758)WAGER 70.72800000000001 0.0018012999999999998 28420900.0 3647.2 2873.1000000000004 2969.8 3324.7 2910.7 3061.3999999999996 2683.5 2600.2 3947.8999999999996 3639.2 4142.7 True False 4017.461059073268 3115.226220145327 3171.3484868581586 3530.0591680584557 2706.2624733698754 3036.4689734039353 2785.6220609675443 2548.3369711825617 3781.983492192067 3409.420290930241 3633.1741627389893 1.1057716693780988 0.8574392750268844 0.8728864471686466 0.9716184828852804 0.7448755143985911 0.8357620189379504 0.7667185596375348 0.7014078756030273 1.0409584905065197 0.938413667557279 1.0 11.827014810255111 -8.79882034358474 24.999450382781678 1.0193415714694298 0.8539578897841905 0.22991629829655502 0.10792575452439612 134.763659931054 90125.97912011408 0.01804737615319739 0.019213112580163894 1.5892040253170073e-09 8.79882034358474 -0.16538368168523931 TRS(ph)WDSSSPVDRPEPEAAS(ph)PTTR ddPTM_A549_MK2206_60min_R1 1 TRSWDSSSPVDRPEPEAASPTTR 23 2 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 T(0.434)RS(0.566)WDSSSPVDRPEPEAAS(0.379)PT(0.29)T(0.331)R 108.52 6.252399999999999e-11 6599800.0 1554.6 1364.6 913.24 1084.6 1540.9 1133.0 1221.6 1328.1 2211.6 1705.4 2004.2 True False 1816.9784736791369 1434.0523113221443 1042.7511642869633 1350.3270486895442 1314.2356512178874 1252.8933079754677 1443.5489073534768 1516.3622421356688 1710.6761311994837 1320.14895554826 1506.5018268939687 1.2060911186714547 0.9519087768242557 0.6921672086099334 0.8963328318516427 0.8723757434317314 0.831657343926772 0.9582125169603776 1.0065452394850591 1.1355287465707702 0.8763009323859089 1.0 10.556986707112731 -8.250888341859362 2.6268574898596815 1.0636050364840541 0.8990328485569756 0.0437702471895377 0.13203530448299325 0.2896566817289426 3.9672775710798636 0.02078412651620394 0.026590072995915197 5.61192241341555e-09 8.250888341859362 -0.1645721879270785 TRSES(ph)EKSTEVVPK ddPTM_A549_MK2206_60min_R1 1 TRSESEKSTEVVPK 14 2 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 T(0.061)RS(0.207)ES(0.721)EKS(0.008)T(0.002)EVVPK 57.93600000000001 0.0036460999999999998 4392200.0 1979.4 2200.5 1863.2 1910.0 3125.7 2180.3 1874.4 2058.5 2968.6 3569.1 4075.3 True False 2313.4743283162757 2312.4960509045695 2127.42977672843 2377.9500857431585 2665.9136705897513 2411.0178988339917 2214.9542173734094 2350.2986788918556 2296.2168398800804 2762.8378311523948 3063.2905374418683 0.755225239016421 0.7549058839308525 0.6944916751203859 0.776273114377511 0.8702777741794079 0.7870679811022481 0.723063708877938 0.7672464136733739 0.7495915949904101 0.9019183121492683 1.0 11.580866490335001 -10.693748228709012 0.7376564604565685 1.0170354486618816 0.7629080496111075 0.6572597781378167 0.05015180219445814 0.2806221161028794 0.24274861603084139 0.04328655277111016 0.008811783651506639 2.0241923131251903e-11 10.693748228709012 -0.2541273990507741 TRSES(ph)EKSTEVVPK ddPTM_A549_PD325901_60min_R1 2 TRSESEKSTEVVPK 14 2 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95;H0YE68 Q9BZ95-3 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 T(0.047)RS(0.206)ES(0.747)EKSTEVVPK;T(0.019)RS(0.106)ES(0.874)EKSTEVVPK 125.12 2.2570999999999997e-07 17655800.0 6525.0 7465.299999999999 7043.5 6988.2 8263.5 6625.0 7254.2 7689.4 8242.2 7837.4 10102.9 True False 7187.413196548875 8094.42703047263 7521.51426600628 7419.845242646288 7683.100267527388 6571.048196511747 7530.2625506505565 7536.028884782392 7895.808997022578 7342.545226460944 8860.307347559743 0.811192311351185 0.9135605248165519 0.8488999276168241 0.8374252665952746 0.8671369926736712 0.7416275687458527 0.8498872844094398 0.8505380896135531 0.891143917168652 0.8287009624427066 1.0 13.113141028714352 -9.796081164051584 0.6691241491131409 0.9933346593319773 0.8392964590512795 0.0 0.06284487756245927 0.2839457042018441 0.2664392472174469 0.019887457328285757 0.009438792956864606 1.599259119728995e-10 9.796081164051584 -0.1540382002806978 TRSES(ph)SER ddPTM_A549_PD325901_60min_R1 4 TRSESSER 8 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 T(0.002)RS(0.006)ES(0.918)S(0.074)ER;TRS(0.021)ES(0.966)S(0.013)ER;T(0.002)RS(0.008)ES(0.697)S(0.293)ER;T(0.004)RS(0.032)ES(0.932)S(0.032)ER 91.095 0.0021421 63437000.0 4138.47 3826.9 2723.07 3323.8 3439.1899999999996 2630.09 1320.62 2422.89 3059.9700000000003 4064.8999999999996 5652.0 True False 4558.60442781941 4149.406293506719 2907.8739053501413 3529.1035771025045 3197.633158961396 2608.671419043559 1370.8769167709927 2374.5635582295654 2931.370102232314 3808.241520279826 4956.839830979983 0.9196594167373288 0.8371071963175312 0.5866386658645061 0.7119664337438939 0.6450951146285503 0.5262771257484461 0.27656268177218185 0.47904786904524743 0.5913788224326734 0.7682801240577758 1.0 12.275204926810215 -10.568968477634412 0.9551951694965548 0.9907711210345139 0.6140570117144034 0.21820661685439324 0.1760660559895527 0.43997659984409293 0.741771589806123 0.10668428838041118 0.032606760915803494 2.6979352493812703e-11 10.568968477634412 -0.3767141093201105 TRSES(ph)SERR ddPTM_A549_PD325901_60min_R1 1 TRSESSERR 9 2 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 TRSES(0.779)S(0.221)ERR 76.165 0.0015375999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TRSESS(ph)ERR ddPTM_A549_PD325901_60min_R1 1 TRSESSERR 9 2 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 TRSES(0.287)S(0.713)ERR 93.09100000000001 0.00016711 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TRSLS(ph)DFTGPPQLQALK ddPTM_A549_MK2206_60min_R1 2 TRSLSDFTGPPQLQALK 17 1 O95425-4;O95425;O95425-3 O95425-4;O95425-3 SVIL Supervillin 1 T(0.295)RS(0.295)LS(0.385)DFT(0.025)GPPQLQALK;T(0.262)RS(0.262)LS(0.416)DFT(0.06)GPPQLQALK 84.499 2.869e-05 4049600.0 2085.83 2192.77 2459.8999999999996 2371.5099999999998 3016.4 2331.96 2361.02 2237.62 3626.6 3178.5 3383.2 True False 2437.8671103526 2304.372626922071 2808.7508092390854 2952.5300564611307 2572.6915558009177 2578.7264593702334 2789.9867724621017 2554.809487423851 2805.1808904901663 2460.4746424358777 2543.058068430135 0.958636037696744 0.9061423549579394 1.1044776539345664 1.1610155871445627 1.0116526978831735 1.0140257870564935 1.0970991213678418 1.0046209794182837 1.1030738642243603 0.9675259377599518 1.0 11.312348689702185 -5.754906214046724 24.99998705929897 1.0553736543697194 0.9323891602932958 0.3910162984060013 0.05716485175047564 108.55482251083524 415386.61345238425 0.0076261563154415716 0.02821446215201786 1.7583032787984848e-06 5.754906214046724 -0.12298449407642364 TRT(ph)DSYSAGQSVEILDGVELGEPAHKK ddPTM_A549_PD325901_60min_R1 1 TRTDSYSAGQSVEILDGVELGEPAHKK 27 2 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.301)RT(0.363)DS(0.25)YS(0.085)AGQSVEILDGVELGEPAHKK 151.37 2.3956e-33 44716000.0 1212.8 1156.2 1146.4 978.18 988.85 1059.5 1105.7 1157.6 1527.4 1388.8 1480.5 True False 1335.922563183828 1253.6370316842535 1224.2015978632205 1038.5999569920352 919.3965873473052 1050.8717832761056 1147.778018562256 1134.5107598803672 1463.2086896765775 1301.1109309859091 1298.4078856627493 1.028892829391536 0.9655186521332291 0.9428482462106648 0.7999026873299527 0.7080953508519516 0.8093541289143563 0.8839887921478489 0.8737706944080028 1.1269252950737498 1.002081815239269 1.0 10.342527951653828 -8.747956031297518 24.82382892371569 1.0599369411790227 0.8715606988263686 0.4085719534962865 0.0884077866423368 147.11144088203946 270842.63553542434 0.016902170591316514 0.019111824144930484 1.7866684510094003e-09 8.747956031297518 -0.18837624235265416 TRT(ph)FSATVR ddPTM_A549_MK2206_60min_R1 1 TRTFSATVR 9 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.019)RT(0.557)FS(0.286)AT(0.138)VR 80.014 0.0006758999999999999 13764000.0 1299.1 1755.2 2163.1 1623.3 2700.8 1429.6 1622.7 1006.0 4128.3 3601.3 4121.5 True False 1518.3563200543974 1844.5321829346512 2469.8601062909315 2021.008572872705 2303.515897728125 1580.8793231083234 1917.5235854309794 1148.603580745789 3193.2466415404388 2787.763828788526 3098.0178023867334 0.4901057440291808 0.5953910857173291 0.7972388358737432 0.6523553774661032 0.7435450809719302 0.5102873591915461 0.6189517645617487 0.3707543513342297 1.0307386352268022 0.8998540378434283 1.0 11.597129719086942 -8.782697407246735 24.999973955197486 1.0145155435069761 0.6084552816979095 0.6734329612391899 0.11672154092880264 83.48291856706209 98177.58422135809 0.0191303275336278 0.020375249703404 1.6493111415055232e-09 8.782697407246735 -0.4060602618090666 TRT(ph)PASINAT(ph)PANINLADLTR ddPTM_A549_PD325901_60min_R1 2 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 2 T(0.441)RT(0.554)PAS(0.091)INAT(0.915)PANINLADLTR;T(0.438)RT(0.543)PAS(0.342)INAT(0.677)PANINLADLTR 63.803000000000004 0.00042242 6787600.0 1400.19 1679.08 2034.13 1670.23 1782.24 2041.54 1450.13 2050.45 1869.67 2614.8 1854.75 True False 1542.3362580346013 1820.5819643317716 2172.1782940173716 1773.3963137324495 1657.0616107942176 2024.9143751104298 1505.3154906915845 2009.5521662030917 1791.0942718525641 2449.701081755439 1626.6275082289658 0.948180361042745 1.119237167158189 1.3353876551506183 1.0902288967578584 1.0187099396827413 1.244854378071541 0.9254211447158772 1.2354101698372515 1.1011090509606996 1.506000033420446 1.0 10.667668201587368 -10.34450270257268 0.6656053543448317 0.9959126211327074 1.1191368567326534 0.0 0.19202220803153147 1.3086181552135114 1.0317585052718325 0.08531580965196987 0.02392817102161544 4.5237364724615865e-11 10.34450270257268 0.123224235599946 TRT(ph)PASINATPANINLADLTR ddPTM_A549_MK2206_60min_R1 1 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 T(0.409)RT(0.59)PAS(0.001)INATPANINLADLTR 117.83 4.6658999999999996e-15 4895200.0 591.4 1023.4 908.84 558.67 1137.1 919.07 958.51 934.56 1332.5 1233.0 1640.5 True False 691.2138616582022 1075.4866887051749 1037.727178124659 695.5441750796492 969.8340963072616 1016.3253773707091 1132.658859845596 1067.036741969965 1030.6908775652528 954.4644436443097 1233.1185745033213 0.560541277984245 0.8721681036540725 0.8415469522406939 0.5640529544044881 0.7864889203359003 0.8241911186684276 0.9185319913795081 0.8653156022726759 0.8358408500823995 0.7740248694483832 1.0 10.268095818079166 -14.999910331716768 0.03346326037237737 2.235157921730951 2.547094247540494e-05 0.17376852399959375 0.1165417328993653 524.2867985935185 1.3543221874179616 73.23671699507894 27.55401907821834 1.0002064901684456e-15 14.999910331716768 -2.2351324507884756 TRT(ph)WESVKR ddPTM_A549_PD325901_60min_R1 1 TRTWESVKR 9 2 C9JYY9;A6NCQ0;A6NJU6;Q9UKK9 C9JYY9 NUDT5 ADP-sugar pyrophosphatase 1 T(0.077)RT(0.923)WESVKR 52.343999999999994 0.0083412 3031700.0 463.36 777.68 872.35 886.0 634.61 801.09 790.18 791.63 671.58 1086.5 1288.1 True False 510.39996609239665 843.2178228681976 931.5529168666965 940.726207748005 590.0371828856483 794.566188640543 820.2507323030876 775.8403186282792 643.3558280823594 1017.8982045767498 1129.6718659386615 0.45181258512470573 0.7464272133284962 0.8246225695747986 0.8327428841173639 0.5223084691016692 0.7033601637766963 0.7260964506905984 0.6867837838765877 0.5695068165194901 0.9010565238171729 1.0 10.141688060727425 -10.892445269717381 1.0954134734423762 1.0034319614076264 0.6747384595387967 0.4530099494603421 0.11596270197564792 0.33224133807808376 0.695737251454938 0.08476059765202083 0.01944169083023786 1.2810165195176302e-11 10.892445269717381 -0.3286935018688296 TRTDS(ph)TSDGRPAWMR ddPTM_A549_MK2206_60min_R1 4 TRTDSTSDGRPAWMR 15 2 Q14204;A0A2R8Y6I5;A0A2R8Y542;A0A2R8Y5T0;A0A2R8Y706 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.016)RT(0.013)DS(0.846)T(0.05)S(0.076)DGRPAWMR;T(0.051)RT(0.051)DS(0.8)T(0.04)S(0.059)DGRPAWMR;T(0.001)RT(0.003)DS(0.955)T(0.018)S(0.023)DGRPAWMR;TRT(0.001)DS(0.98)T(0.005)S(0.013)DGRPAWMR 125.23 3.4499e-08 280335000.0 7291.5 6846.750000000001 6209.1 6814.450000000001 10550.0 6869.570000000001 6926.7 6643.400000000001 10511.5 9988.599999999999 10119.5 True False 8522.12693994045 7195.220330166264 7089.64374553697 8483.990555912284 8998.108975500487 7596.503337748487 8185.191729342929 7585.1222945592235 8130.662033416252 7732.168322616019 7606.548866008141 1.120367079744115 0.9459244207737879 0.932044724936811 1.115353454682349 1.1829423742626433 0.9986793579537042 1.0760716684435705 0.9971831415499521 1.0689028857423435 1.0165146453169114 1.0 12.893026327982252 -10.980373102728722 1.1766427427865342 0.9992628583924134 1.0481761317394476 0.04245007450861682 0.07280142239330353 1.3792250834377202 3.3099664946467873 0.0561061755134752 0.012102907960902137 1.0462293454052897e-11 10.980373102728722 0.048913273347034214 TRTDS(ph)TSDGRPAWMR ddPTM_A549_PD325901_60min_R1 6 TRTDSTSDGRPAWMR 15 2 Q14204;A0A2R8Y6I5;A0A2R8Y542;A0A2R8Y5T0;A0A2R8Y706 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.141)RT(0.111)DS(0.691)T(0.024)S(0.033)DGRPAWMR;T(0.002)RT(0.002)DS(0.908)T(0.038)S(0.05)DGRPAWMR;T(0.01)RT(0.042)DS(0.827)T(0.052)S(0.069)DGRPAWMR;T(0.06)RT(0.048)DS(0.569)T(0.161)S(0.161)DGRPAWMR;T(0.179)RT(0.145)DS(0.471)T(0.102)S(0.102)DGRPAWMR;T(0.012)RT(0.046)DS(0.85)T(0.046)S(0.046)DGRPAWMR 73.11 0.00017991 437864000.0 11500.57 11095.89 12201.500000000002 12841.3 14247.299999999997 13555.0 12579.0 12971.380000000001 16464.6 15899.6 17470.100000000002 True False 12668.09940012784 12030.97959132934 13029.56716357998 13634.477936291716 13246.618798516722 13444.612574145922 13057.700728492913 12712.655650049242 15772.650119188807 14895.696542557293 15321.388452088348 0.8268245035195321 0.785240817367925 0.8504168668737079 0.8898983260510765 0.8645834442446482 0.8775061487533387 0.8522530950328534 0.8297326113624168 1.0294530530644532 0.9722158399114911 1.0 13.903259422385215 -8.762075489328781 24.999999913975376 1.0139083946867198 0.8483088624246414 0.838105477422474 0.029885572659443457 4.0603382426129775 159576.18847805983 0.005193099788942998 0.005691719042129703 1.7295157076227127e-09 8.762075489328781 -0.16559953226207835 TRTDS(ph)Y(ph)SAGQSVEILDGVELGEPAHKK ddPTM_A549_PD325901_60min_R1 1 TRTDSYSAGQSVEILDGVELGEPAHKK 27 2 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 2 T(0.122)RT(0.129)DS(0.633)Y(0.509)S(0.442)AGQS(0.165)VEILDGVELGEPAHKK 46.082 0.010175 4608000.0 2059.5 1851.6 2066.1 2714.6 2294.6 2075.2 2296.1 2451.4 2370.6 2551.3 2318.3 True False 2268.5789238762313 2007.6408301907647 2206.317970468599 2882.27467669609 2133.4352119402606 2058.300259230368 2383.4793419741304 2402.504903913903 2270.9719259835642 2390.2104825924193 2033.1637969145252 1.1157875854955541 0.9874466746051187 1.0851648911990504 1.4176303360654723 1.0493179227261005 1.0123632254095756 1.1723006998212513 1.1816583137865626 1.1169645699131228 1.175611372885814 1.0 10.98951073175679 -10.39451332011138 0.7932633896688753 1.0009387785272603 1.1266599267091062 0.0 0.12018356470445811 0.9648978980412193 1.1178700197016762 0.06917218646158137 0.02157975192713488 4.031685807953147e-11 10.39451332011138 0.12572114818184588 TRTDS(ph)YSAGQSVEILDGVELGEPAHK ddPTM_A549_MK2206_60min_R1 4 TRTDSYSAGQSVEILDGVELGEPAHK 26 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.125)RT(0.095)DS(0.437)YS(0.125)AGQS(0.219)VEILDGVELGEPAHK;T(0.234)RT(0.135)DS(0.576)YS(0.055)AGQSVEILDGVELGEPAHK;T(0.187)RT(0.134)DS(0.542)YS(0.134)AGQS(0.002)VEILDGVELGEPAHK;T(0.151)RT(0.151)DS(0.662)YS(0.035)AGQSVEILDGVELGEPAHK 275.96 2.4903999999999993e-153 54378200.0 8061.8 7941.0 7896.4 6506.04 10587.7 8365.8 7845.9 8405.1 13099.8 11831.300000000001 12308.3 True False 9422.434747913585 8345.162981246627 9016.228257276925 8100.020092067234 9030.263355441377 9251.063403231396 9271.398471025404 9596.548664539197 10132.716216082023 9158.601112805289 9251.809418201286 1.018442374026493 0.9020033383771402 0.9745367473241616 0.8755065875148582 0.9760537584870634 0.9999193655061221 1.0021173212653494 1.0372618188242937 1.0952145421573114 0.9899253971647289 1.0 13.175519832278237 -7.586459971512614 1.4221260356050798 1.0447048428269583 0.9428302469295791 0.38451177609955267 0.0447006328440208 0.25921083814658347 1.0554924449415333 0.007775857282860736 0.01334357657846481 2.5914332601556065e-08 7.586459971512614 -0.10187459589737924 TRTDS(ph)YSAGQSVEILDGVELGEPAHK ddPTM_A549_PD325901_60min_R1 4 TRTDSYSAGQSVEILDGVELGEPAHK 26 1 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.212)RT(0.127)DS(0.636)YS(0.025)AGQSVEILDGVELGEPAHK;T(0.205)RT(0.142)DS(0.603)YS(0.038)AGQS(0.012)VEILDGVELGEPAHK;T(0.208)RT(0.138)DS(0.622)YS(0.031)AGQS(0.002)VEILDGVELGEPAHK;T(0.244)RT(0.133)DS(0.592)YS(0.03)AGQSVEILDGVELGEPAHK 291.45 1.6846999999999998e-170 61529000.0 7645.800000000001 8156.700000000001 8923.5 8559.5 9286.1 8578.4 7773.8 8802.2 8644.5 9625.1 9730.5 True False 8421.995987459528 8844.093734941136 9529.102371364668 9088.200874965074 8633.876371305872 8508.540354559453 8069.636212986584 8626.63321580768 8281.201727058515 9017.369543370158 8533.710186721639 0.9869090704022341 1.0363714658018794 1.11664237041842 1.0649765080030742 1.0117377063894308 0.9970505405490158 0.9456187328159856 1.0108889365882883 0.9704104716309648 1.056676327888553 1.0 13.058957400675784 -6.982002044890424 3.0389113787666573 0.9852675758231522 1.0545180408554549 0.2702880002784338 0.039140355930145636 0.17063791751725643 3.2396730436250483 0.004909597064708712 0.00952766290588208 1.0423125216175867e-07 6.982002044890424 0.0692504650323027 TRTDS(ph)YSAGQSVEILDGVELGEPAHKK ddPTM_A549_MK2206_60min_R1 2 TRTDSYSAGQSVEILDGVELGEPAHKK 27 2 B1AKQ2;B1AKP8;P42345 B1AKQ2 MTOR Serine/threonine-protein kinase mTOR 1 T(0.149)RT(0.149)DS(0.668)YS(0.034)AGQSVEILDGVELGEPAHKK;T(0.103)RT(0.103)DS(0.752)YS(0.042)AGQSVEILDGVELGEPAHKK 250.72 5.444799999999999e-125 29643000.0 6322.5 5797.0 4922.700000000001 4654.0 9672.7 7737.9 6450.4 6969.700000000001 11057.0 10276.2 10360.6 True False 7389.583429715902 6092.042539011042 5620.8128820851425 5794.230208926001 8249.858643348216 8556.719441997679 7622.354184669996 7957.6763188110635 8552.607154400755 7954.799282869144 7787.777081986656 0.9488694080379126 0.7822569232370692 0.7217480447772752 0.7440159300820532 1.0593342049338272 1.0987370788757689 0.9787586501802564 1.0218161402202162 1.0982090350509868 1.021446710547072 1.0 12.926995873482092 -6.766170883096447 24.998787731278163 1.0450579498268566 0.792476834592668 0.7641097002704056 0.06420699599415854 41.72073177146678 220432.07655350034 0.009725245029800657 0.018811864498769783 1.7132830444674903e-07 6.766170883096447 -0.2525811152341886 TRTFS(ph)ATVR ddPTM_A549_MK2206_60min_R1 1 TRTFSATVR 9 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.018)RT(0.385)FS(0.587)AT(0.011)VR 80.87100000000001 0.00045685 24918000.0 1496.6 2519.0 2557.3 1853.9 3530.3 2066.0 2134.9 1099.8 5005.1 4073.2 4668.7 True False 1749.189491642992 2647.2063404810797 2919.9635938319066 2308.105583224733 3010.9975465601296 2284.6227487001925 2522.7836954067907 1255.7000179962413 3871.4528415023256 3153.061291039742 3509.3329404350206 0.4984393106417998 0.7543331981926255 0.8320565883583405 0.6577049320770966 0.8579971173059696 0.6510133941343816 0.7188784131419755 0.35781729442877636 1.1031876733309938 0.898478811944496 1.0 11.776981111492672 -8.794078115347183 24.999638328637747 1.0487276114459885 0.6818900035961135 0.5074178537484597 0.14406776868261162 89.08096986145084 68231.1691705608 0.023050057074827195 0.024539491244896645 1.6066522429270664e-09 8.794078115347183 -0.36683760784987496 TRTFS(ph)ATVR ddPTM_A549_PD325901_60min_R1 2 TRTFSATVR 9 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 TRT(0.008)FS(0.978)AT(0.014)VR;T(0.001)RT(0.041)FS(0.918)AT(0.041)VR 101.89 0.00019938 105422000.0 3148.3999999999996 2432.7 3143.2 4286.3 3570.1000000000004 9802.6 5733.6 5400.2 6110.0 4382.3 5525.2 True False 3468.0232502704193 2637.7121665613918 3356.516453597066 4551.055016106405 3319.34849217638 9722.77087564167 5951.795285546305 5292.488774625055 5853.217948097349 4105.6008301120055 4845.635427128555 0.715700407598661 0.5443480439725233 0.6926886069070374 0.9392070626335349 0.6850182070225147 2.006500699827355 1.228279629174092 1.0922176986313843 1.2079360975709785 0.8472781107564499 1.0 12.242470148952092 TS(ph)AGSSSGTNSSGQR ddPTM_A549_PD325901_60min_R1 2 TSAGSSSGTNSSGQR 15 0 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 T(0.113)S(0.886)AGS(0.001)SSGTNSSGQR;T(0.131)S(0.869)AGSSSGTNSSGQR 56.482 0.012131 3461900.0 669.27 460.44000000000005 602.14 551.39 549.52 522.46 549.01 445.36 443.71000000000004 513.14 520.0699999999999 True False 737.2137977094667 499.24289471432036 643.004841361968 585.4481080024524 510.92361094108435 518.2052589810609 569.9028759797998 436.47694542183876 425.06241174308906 480.7402528269798 456.1046869953573 1.6163258539743328 1.094579619435926 1.409774684837898 1.283582749081488 1.120189345798775 1.1361542070413664 1.2495001525507252 0.9569665865465699 0.9319404598607332 1.054012963545523 1.0 8.833221185381959 -6.843187974861804 0.4563968966486422 0.9580691630449103 1.4628678243020972 0.567510406138217 0.12996677353154107 0.7492884233412783 0.238409482315595 0.03135785576272795 0.16261096152045265 1.4348682476116452e-07 6.843187974861804 0.5047986612571869 TS(ph)ANSNK ddPTM_A549_PD325901_60min_R1 2 TSANSNK 7 0 A0A0A0MQS0;F8W9L8;A8MW92;A8MW92-4;H0YC05;E9PM57;A8MUE8;A8MXR8;A8MW92-2 A0A0A0MQS0 PHF20L1 PHD finger protein 20-like protein 1 1 T(0.283)S(0.358)ANS(0.358)NK;T(0.044)S(0.478)ANS(0.478)NK 49.813 0.053706 25670000.0 17020.7 14128.7 13956.599999999999 12801.400000000001 13509.6 13591.099999999999 12491.0 11345.7 18305.5 15902.0 19779.0 True False 18748.62893402291 15319.375133676967 14903.778803853658 13592.11340391119 12560.732301589887 13480.418587714834 12966.351840337467 11119.401112970538 17536.183494090998 14897.945006147702 17346.30838941136 1.080842592736767 0.8831490130216015 0.8591902362897754 0.7835738359297343 0.7241155881476942 0.7771347242934776 0.7474992113164821 0.6410240647951417 1.010946139110241 0.858853922788655 1.0 14.082341043219277 -8.802252315848119 24.951319114408985 1.0051691291346891 0.8088083128314217 0.2102988979706354 0.11451836162265785 103.50591827530992 63278.73161329724 0.0187208020571627 0.01992991807535129 1.5766949773369957e-09 8.802252315848119 -0.1963608163032674 TS(ph)APAT(ph)PEIQGR ddPTM_A549_MK2206_60min_R1 1 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 2 T(0.454)S(0.549)APAT(0.997)PEIQGR 69.345 0.0056142 4622700.0 784.67 564.22 680.24 713.67 1282.6 1040.3 699.75 524.99 764.58 1082.5 1352.7 True False 917.1031126603681 592.9363880215302 776.7082606922208 888.5191820378636 1093.9312390499463 1150.383855504748 826.8855172892889 599.4089402144451 591.4038507833706 837.9624981710994 1016.7872573792391 0.9019616502907343 0.5831469500806087 0.7638847311031218 0.8738496431672585 1.075870326964507 1.131390905182912 0.8132335562707381 0.589512639801778 0.5816397151826127 0.8241276551113955 1.0 9.98980214003206 -11.218172757295756 1.687008305247864 0.9997550227909856 0.7794319398166867 0.0 0.18545046412185665 0.6299287281619581 3.2365801023183782 0.1504283031057663 0.03133081124436544 6.051001250785674e-12 11.218172757295756 -0.22032308297429892 TS(ph)APAT(ph)PEIQGR ddPTM_A549_PD325901_60min_R1 1 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 2 T(0.389)S(0.613)APAT(0.998)PEIQGR 80.469 0.0012454 6670500.0 980.22 891.61 974.7 1082.1 906.8 1065.0 1056.4 809.14 1053.7 1101.4 834.97 True False 1079.7312128001752 966.7491038055671 1040.8490033472444 1148.9388593725926 843.1094962901714 1056.3269930996248 1096.6018800842608 793.0010679419497 1009.4166533404542 1031.8574160338997 732.2739833109265 1.4744907471903408 1.3202013533711487 1.4213928489458512 1.5690013376929555 1.1513579828114469 1.4425297322779582 1.4975294836040067 1.082929458119555 1.378468546399049 1.409113855675204 1.0 9.516239729551767 -13.583890264225811 0.2277138139186996 2.384127272534003e-10 1.4287062590069142 0.0 0.18127974766092392 13.3150414101622 0.2914889773044696 6.175017611907542 0.08535375512527689 2.606812145545481e-14 13.583890264225811 1.4287062587685015 TS(ph)APATPEIQGR ddPTM_A549_MK2206_60min_R1 1 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 T(0.315)S(0.682)APAT(0.003)PEIQGR 44.608000000000004 0.058562 24736000.0 1520.4 1909.3 1453.8 1562.9 1803.5 1658.6 1320.4 1516.3 2272.4 2077.4 2413.9 True False 1777.0063497888593 2006.475214720336 1659.9707006267654 1945.810570161246 1538.2075390820037 1834.111951110426 1560.2995884655622 1731.2401684739955 1757.7050282771336 1608.1138971830392 1814.4620097492027 0.9793571539337323 1.1058237670116189 0.9148555834774456 1.0723898101510532 0.8477485507093183 1.010829624018383 0.8599240877361929 0.9541341506032908 0.9687196639185 0.8862758705018656 1.0 10.825326135405927 -5.765600287399629 24.999702932254223 0.9693604288201123 1.042590454130908 0.1513040778431809 0.07270256073682509 125.12217880360788 751786.5487707948 0.008547127301251456 0.028039670581327815 1.715535512451587e-06 5.765600287399629 0.07323002531079559 TS(ph)APATPEIQGR ddPTM_A549_PD325901_60min_R1 1 TSAPATPEIQGR 12 0 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 T(0.031)S(0.969)APATPEIQGR 219.92 2.241e-32 27103000.0 6625.1 6721.5 6946.2 7318.6 6995.9 7382.6 6817.8 8583.3 7383.2 7891.3 7793.5 True False 7297.675274859151 7287.9443941063055 7417.610902893842 7770.653300253441 6504.5321185447865 7322.47855329323 7077.255109843312 8412.099348031416 7072.909779769617 7393.04197126232 6834.948907066965 1.0677000478107088 1.0662763530786554 1.0852474544797892 1.1368999835856868 0.9516577529671735 1.07132893791235 1.0354510627761702 1.2307479488740234 1.0348153111220206 1.081652850925969 1.0 12.73871483803159 -8.98532510413811 24.693735169453852 1.0153595899482386 1.0796360269676104 0.048777858200627966 0.06707992596081258 91.01691763627439 153159.49739055807 0.011155065093564773 0.011239645070759275 1.034367569976115e-09 8.98532510413811 0.0642764370193718 TS(ph)DSDQQAYLVQR ddPTM_A549_MK2206_60min_R1 1 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.346)S(0.653)DS(0.001)DQQAYLVQR 366.59 8.767999999999995e-229 46936000.0 14517.0 13749.0 13564.0 10575.0 15427.0 9928.2 10518.0 9811.1 16283.0 14376.0 13824.0 True False 16967.11469342598 14448.76537327286 15487.579160339412 13165.875474729795 13157.708736023324 10978.795534194216 12428.984452802773 11201.853470233615 12594.926498607887 11128.45161543438 10391.119277009388 1.632847650105042 1.3904917254911235 1.4904630336219957 1.26703150293536 1.2662455684764475 1.0565556261571434 1.1961160411566263 1.0780218349545845 1.2120856437933956 1.0709579323236487 1.0 13.343063441724214 -2.0000000000261973 0.24672508673621593 1.0565195952892266 4.553637684734855 0.845392939035803 0.074023819594837 13.897794787731772 0.16811929174940038 0.04053905905598602 20.404010476906638 0.009999999999396785 2.0000000000261973 3.497118089445628 TS(ph)DTETEPSK ddPTM_A549_MK2206_60min_R1 2 TSDTETEPSK 10 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.197)S(0.801)DT(0.002)ETEPSK;T(0.184)S(0.816)DTETEPSK 140.78 5.2721e-08 11203700.0 4377.4 4684.6 3790.8999999999996 3947.7 3696.6 2852.5 2415.55 3186.3 3021.2 5435.4 5782.4 True False 5116.198102845142 4923.0261304556 4328.506623336087 4914.886677218985 3152.8350368564093 3154.349656663746 2854.42416761435 3637.967782634504 2336.903023865021 4207.539364950754 4346.470493878697 1.1770925651170259 1.1326491546161164 0.9958670211685758 1.1307764965023483 0.7253782215470389 0.7257266927513114 0.6567223156430825 0.8369935532193293 0.537655329112707 0.9680358743666603 1.0 12.085628635537983 -6.760350653271954 24.9998232840901 0.7640711599592085 1.1026908967058227 0.5964195045210487 0.13037370682056854 19.627536516573887 450675.428117721 0.02434655060266707 0.04851839490872333 1.7363982790174095e-07 6.760350653271954 0.33861973674661416 TS(ph)DTETEPSK ddPTM_A549_PD325901_60min_R1 1 TSDTETEPSK 10 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.032)S(0.951)DT(0.017)ETEPSK 151.66 2.4129e-08 9330200.0 2546.6 2931.8 2514.4 2260.8 3042.4 2552.6 3036.0 2691.8 2232.9 2692.6 3003.1 True False 2805.1289572921637 3178.8730751529965 2685.0423043154933 2400.4444813506657 2828.7123197102096 2531.812471911833 3151.5366413629463 2638.1099373237516 2139.058978118914 2522.5887764780077 2633.737738219388 1.065075279358927 1.2069816326139453 1.0194797550840393 0.9114212271467671 1.074029611476289 0.9613001458617272 1.1966023023589396 1.0016600738338204 0.8121761506766747 0.9577980145371172 1.0 11.362895977026449 -8.530725149329681 24.48458193634927 0.9110744778366491 1.0598623085605505 0.3004473113765125 0.0923538307675521 131.8036959135816 411289.396866896 0.017434919490629436 0.019788862360155753 2.9462856510259087e-09 8.530725149329681 0.14878783072390145 TS(ph)DVGGYYYEK ddPTM_A549_MK2206_60min_R1 1 TSDVGGYYYEK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.205)S(0.795)DVGGYYYEK 160.56 2.1694e-13 27607000.0 4071.2 4171.0 4485.5 3311.2 5127.2 4529.0 3828.7 3709.6 6298.4 5972.2 5869.5 True False 4758.3190287163925 4383.286084218568 5121.611347958011 4122.444148645414 4372.995671960769 5008.255773893111 4524.325230504466 4235.4471601735395 4871.822456478037 4623.075872126963 4411.941160040988 1.078509176825057 0.9935051092516943 1.1608521424411813 0.9343833018405704 0.9911727090939135 1.1351592399402224 1.0254727038250968 0.9599962933626685 1.1042355914902493 1.0478552873728746 1.0 12.107197835182696 TS(ph)EEDS(ph)K ddPTM_A549_MK2206_60min_R1 1 TSEEDSK 7 0 E9PQS0;Q6ZU52-2;Q6ZU52 E9PQS0 KIAA0408 Uncharacterized protein KIAA0408 2 T(0.433)S(0.567)EEDS(1)K 53.756 0.050817 17745000.0 2457.7 2011.2 1301.6 1069.7 1042.6 1000.5 679.04 756.47 1520.4 2139.5 4022.7 True False 2872.4996750039986 2113.5614894702453 1486.186452012518 1331.776548020658 889.2349211238688 1106.3722459218498 802.4127783638709 863.7019390922138 1176.0318275798954 1656.185464052717 3023.7525691280152 0.9499784156718767 0.6989862566961789 0.4915039898390568 0.44043833533797166 0.2940832296275832 0.3658937762360971 0.26536985418594267 0.28563909226914247 0.3889312371610609 0.5477251945023812 1.0 11.562124374652049 -10.667441634728352 0.9486853367441331 0.9978450520933209 0.4528561955552876 0.11126944773752068 0.23213206274817674 0.3813402116713027 0.6145264105292574 0.13897197396795793 0.037507751210872214 2.1505936803651113e-11 10.667441634728352 -0.5449888565380332 TS(ph)EEDTPK ddPTM_A549_MK2206_60min_R1 2 TSEEDTPK 8 0 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 T(0.173)S(0.826)EEDT(0.001)PK;T(0.119)S(0.881)EEDTPK 81.33800000000001 0.0037411000000000002 7728200.0 2225.7 2887.6000000000004 2548.24 1638.88 1053.98 1023.52 1248.5 755.52 1822.75 3166.0 3845.6 True False 2601.34374685942 3034.5665060631864 2909.6187495977083 2040.405673572118 898.9409381988633 1131.8282070424104 1475.3362891542363 862.617273682961 1409.9000353336314 2450.798401117504 2890.631386839361 0.8999223348583888 1.049793660955576 1.0065685866571554 0.7058685112400699 0.31098428609459344 0.3915505146022649 0.5103854804425204 0.2984182893780011 0.4877481237326587 0.8478418978897293 1.0 11.49716893281128 -6.313334752942348 4.933008767328288 0.6404946771031309 0.9928188060508034 0.39803854281609463 0.21613432778401856 0.23546429124140064 12.78979134762046 0.04029103638721085 0.0977221241002397 4.86032428867933e-07 6.313334752942348 0.3523241289476725 TS(ph)EEDTPK ddPTM_A549_PD325901_60min_R1 2 TSEEDTPK 8 0 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 T(0.207)S(0.793)EEDTPK;T(0.017)S(0.983)EEDTPK 117.31 0.0012665999999999999 10611000.0 2899.0 2802.2 3007.5 2772.1 3775.6 2233.6 2527.3999999999996 2955.0 3214.5 2828.8 3389.5 True False 3193.3043458689976 3038.3512283217556 3211.607035566676 2943.326321104116 3510.414881112893 2215.410302147719 2623.581590046347 2896.0602068473463 3079.4057437248666 2650.1890852339734 2972.612987810799 1.0742415373151983 1.0221146313968608 1.080398642115833 0.9901478373314073 1.1809189072063369 0.7452737074190317 0.8825843124565306 0.9742473099332616 1.0359255497947333 0.8915351901176086 1.0 11.537515931927002 TS(ph)FLEGTLR ddPTM_A549_PD325901_60min_R1 2 TSFLEGTLR 9 0 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 T(0.17)S(0.83)FLEGTLR;T(0.183)S(0.817)FLEGTLR 57.785 0.012758 3800300.0 1077.13 1007.78 1214.01 1244.93 1444.12 1255.5 1283.96 1084.9099999999999 1374.29 1080.2 979.51 True False 1186.4794446588044 1092.7091574042174 1296.4000190351778 1321.8264986588315 1342.6899931435403 1245.2756242596977 1332.821800409871 1063.270618954569 1316.5333705222104 1011.9959876519154 859.0364796254781 1.381174691412505 1.2720171765937294 1.5091326733881907 1.5387315090915814 1.5630185969854562 1.4496190252625962 1.5515310839778926 1.2377479236017226 1.5325698055293195 1.1780593858984014 1.0 9.746575587561386 -10.842797059605061 0.7914952609390465 0.9591517700847954 1.455688655213966 0.5682219572089833 0.11719225064180752 0.3480722745125506 0.33228539992673095 0.11355764926658762 0.020123960568941654 1.436160376412109e-11 10.842797059605061 0.4965368851291707 TS(ph)FRKPK ddPTM_A549_PD325901_60min_R1 1 TSFRKPK 7 2 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 T(0.093)S(0.907)FRKPK 58.676 0.01056 6027600.0 3338.3 3437.9 3488.2 3854.6 4693.5 4379.2 3934.9 3964.9 3751.0 4441.2 4711.2 True False 3677.201758473429 3727.623898311099 3724.9302282505987 4092.689887568241 4363.844751695988 4343.53724711913 4084.644772759902 3885.8169590961234 3593.3585144538715 4160.781874060067 4131.752266757412 0.8899860207154402 0.9021895935780603 0.9015376498295997 0.9905458080090007 1.0561728946834272 1.0512579086760994 0.9885986644512741 0.9404767537395706 0.8696936027275249 1.007025979639732 1.0 12.01253803977624 -6.202133087791848 9.194979338645911 0.9602081672480471 0.8981442156559832 0.2669118361335574 0.05366294170690622 0.7602353120228355 113.2073958796232 0.009682040020058567 0.02566302576571982 6.278659223503122e-07 6.202133087791848 -0.062063951592063904 TS(ph)FSFQK ddPTM_A549_MK2206_60min_R1 1 TSFSFQK 7 0 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 T(0.324)S(0.542)FS(0.133)FQK 88.37 0.012792 6987400.0 4036.3 4540.2 4362.9 3992.6 5735.8 4244.2 3676.4 4097.6 5906.4 5564.5 5181.3 True False 4717.528761939474 4771.276787237868 4981.6248244356275 4970.787179234622 4892.071418168312 4693.318426928049 4344.354291907595 4678.4473483737065 4568.609830582669 4307.475585286908 3894.6402133947327 1.2112874369536377 1.2250879480030383 1.2790975678067662 1.2763148601348915 1.2561035551738877 1.2050711156287155 1.1154699930859269 1.2012527709962133 1.1730505464586871 1.1060009010517382 1.0 11.927274343032233 -10.991631838064675 0.2402569543758611 0.8492314279268746 1.2668788546292047 0.6476601031403739 0.04756727337779167 1.8308879407220988 0.12582068768339497 0.22539351060182375 0.03106474563801977 1.0194552387092855e-11 10.991631838064675 0.4176474267023301 TS(ph)FSFQK ddPTM_A549_PD325901_60min_R1 1 TSFSFQK 7 0 H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7 H0Y7F8 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 T(0.208)S(0.79)FS(0.002)FQK 74.173 0.018705 16589000.0 2756.1 2367.2 2434.5 2426.1 2876.8 2725.5 2850.1 2581.6 2989.8 2882.7 2432.7 True False 3035.897243066415 2566.6922516891236 2599.719809837763 2575.9546869271294 2674.743492421226 2703.3044316366454 2958.5621151345613 2530.10796277398 2864.149103309569 2700.6858300353406 2133.493322155873 1.422970117384137 1.2030467707747534 1.2185272777000178 1.2073882117072452 1.2536919917417062 1.2670789280488508 1.3867219945853708 1.1858991713258946 1.3424692140190886 1.2658515505951176 1.0 11.059001879565919 -10.843666434186916 0.9747022308433243 0.9920852972767291 1.274910823267559 0.02975016136341957 0.1068088852227822 0.2823505045173577 0.4537466421684015 0.05795776346023712 0.012668823603823938 1.433288333313388e-11 10.843666434186916 0.2828255259908299 TS(ph)FSVGS(ph)DDELGPIR ddPTM_A549_PD325901_60min_R1 1 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 2 T(0.413)S(0.587)FS(0.021)VGS(0.979)DDELGPIR 124.16 3.0066e-07 3413500.0 2651.1 2313.1 2574.8 2871.5 3492.1 2400.2 2492.2 2697.4 2782.2 2964.7 3214.8 True False 2920.2377203633323 2508.0330548251573 2749.5414115301996 3048.8660333503367 3246.8269430909895 2380.653566983772 2587.0420347841673 2643.598240930636 2665.27380936112 2777.508336041134 2819.399980296257 1.035765673821307 0.8895626985716365 0.9752221858358966 1.0813882580186327 1.1516021017882745 0.8443830544162867 0.9175860299581636 0.937645690361696 0.9453336979455672 0.9851416455459004 1.0 11.461172448152448 -7.272532090778123 24.995169820440882 0.957710059065824 1.0192664440156172 0.2446041990320248 0.07258641940596669 1202.8003558352843 2710263.079859776 0.011590315925948993 0.018634811287240854 5.339098205870107e-08 7.272532090778123 0.06155638494979321 TS(ph)FSVGSDDELGPIR ddPTM_A549_MK2206_60min_R1 2 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 T(0.149)S(0.85)FSVGSDDELGPIR;T(0.182)S(0.817)FS(0.001)VGSDDELGPIR 136.33 1.1214e-09 3109000.0 2258.1 2249.3 2036.1 1755.28 2673.1 2335.4 2009.17 2195.33 3518.1000000000004 3572.4 3019.3999999999996 True False 2639.212074755474 2363.779762462919 2324.849596606243 2185.3236787975143 2279.890531034158 2582.530477886944 2374.210181882273 2506.5247504161584 2721.2559672512693 2765.392358860448 2269.5996487993452 1.1628535791110384 1.0414963554093764 1.024343477421723 0.9628674731041599 1.004534227981687 1.13787930803265 1.0460920643595748 1.1043907024492845 1.199002638500961 1.2184494125752026 1.0 11.1482221171426 -7.254267735919581 24.651350171911186 1.0957836767433162 1.0342773708069106 0.18222028979176474 0.0749894522977666 860.508373390003 2957854.644088243 0.012513636189159396 0.021381261890864867 5.568423582803035e-08 7.254267735919581 -0.0615063059364056 TS(ph)GGLLSEAPNEK ddPTM_A549_MK2206_60min_R1 1 TSGGLLSEAPNEK 13 0 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 T(0.169)S(0.829)GGLLS(0.003)EAPNEK 49.482 0.051091000000000004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TS(ph)IETNIR ddPTM_A549_MK2206_60min_R1 1 TSIETNIR 8 0 P14859-5;P14859-6;A0A0C4DG88;P14859-4;P14859-3;P14859;P14859-2;A0A0A0MT46;H0YLC5;Q9UKI9-3;Q9UKI9;Q9UKI9-2 P14859-5 POU2F1;POU2F3 POU domain, class 2, transcription factor 1;POU domain protein;POU domain, class 2, transcription factor 3 1 T(0.097)S(0.903)IETNIR 64.297 0.009487200000000001 2526800.0 543.81 954.65 808.57 743.3 1107.7 620.51 1013.1 895.78 1073.1 1309.8 1443.1 True False 635.5918331219934 1003.237607360168 923.2373843759686 925.4085333680046 944.7587973613176 686.171956338798 1197.1671562211914 1022.7595582111963 830.0445633885724 1013.9152703043925 1084.7384424661645 0.5859401752896012 0.9248659106054142 0.8511152073461862 0.8531167488303247 0.870955393830607 0.6325690410480693 1.103645919932015 0.9428628304957474 0.7652024957292536 0.9347094475597686 1.0 10.083131499454145 -7.751829611902902 24.999655521554725 0.9058189619710292 0.8025337195204645 0.2647201056237286 0.12444488143091742 345.0386548038475 897609.6057589806 0.02069738790664016 0.030479379345090558 1.7708035668889782e-08 7.751829611902902 -0.1032852424505647 TS(ph)IGER ddPTM_A549_PD325901_60min_R1 1 TSIGER 6 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 T(0.364)S(0.636)IGER 81.191 0.042414 20724000.0 715.61 536.93 487.31 669.7 378.87 520.77 471.22 698.91 440.44 458.67 567.88 True False 788.2582003957616 582.1789754559992 520.3817870330828 711.0658480009473 352.25947823054423 516.5290217807434 489.1525349614779 684.9696917657116 421.92983847135775 429.7094979228881 498.0343600879176 1.5827385890736756 1.1689534339623227 1.0448712553511774 1.427744559382255 0.7072995489073488 1.0371353126911986 0.9821662402472154 1.3753462545130308 0.8471902187569444 0.8628109471142349 1.0 8.960101469052846 -2.0000000003704597 0.48316294424061434 0.9612590370784461 17.136953023603166 0.3846199766459384 0.20152001313809115 61.31424967816456 0.6072741927240864 0.036636012761535074 1005.480888627409 0.009999999991469851 2.0000000003704597 16.17569398652472 TS(ph)IIEAQYLR ddPTM_A549_MK2206_60min_R1 2 TSIIEAQYLR 10 0 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 T(0.108)S(0.892)IIEAQYLR;T(0.109)S(0.891)IIEAQYLR 154.66 1.7124e-08 3939000.0 971.96 1222.95 834.81 682.47 1357.76 1004.32 979.5 1377.74 1922.9499999999998 1562.04 1541.48 True False 1136.0030858594978 1285.1929313582116 953.1986109438922 849.675180637243 1158.0353026137966 1110.5964757863387 1157.462471146636 1573.0388641517936 1487.4048953201523 1209.1740791161042 1158.687973316293 0.9804219186017193 1.1091794865876163 0.8226534087652023 0.73330801752035 0.9994367157357917 0.9584948677836785 0.9989423363339576 1.35760351395517 1.2836975351207238 1.0435717871959216 1.0 10.178276395479143 -8.018615859700231 20.791468661371347 1.1556170167943258 0.9346872123696779 0.42267032917453395 0.12946660736491855 77.16181851349626 86180.17855281857 0.02442637622419609 0.0319034688013722 9.58041099054988e-09 8.018615859700231 -0.22092980442464794 TS(ph)IIEAQYLR ddPTM_A549_PD325901_60min_R1 1 TSIIEAQYLR 10 0 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 T(0.164)S(0.836)IIEAQYLR 61.343999999999994 0.0075658999999999995 3144500.0 946.38 917.89 848.92 748.01 753.77 612.5 981.18 739.27 888.65 805.8 919.88 True False 1042.4558009118666 995.2438116352356 906.532816170661 794.2128788460333 700.8277955653319 607.5120030737277 1018.5193418222973 724.5246799039044 851.3031308636188 754.9216504813114 806.7405915997633 1.2921821608662099 1.2336602645240289 1.1236980333083404 0.9844712006756873 0.8687151766785322 0.753045042482657 1.2625115835594407 0.8980887877070557 1.0552377551444239 0.9357675296644054 1.0 9.6559610375331 -5.908573124600191 2.3369878527655628 1.0017016680512707 1.2764380871212544 0.45194829974010564 0.12329634729293422 0.21851338020945976 2.3308420293656265 0.016688242205292202 0.07172533101839598 1.2343174687109692e-06 5.908573124600191 0.2747364190699837 TS(ph)ISVER ddPTM_A549_MK2206_60min_R1 2 TSISVER 7 0 P30411-2;P30411 P30411-2 BDKRB2 B2 bradykinin receptor 1 T(0.276)S(0.724)IS(0.001)VER;T(0.196)S(0.683)IS(0.122)VER 88.177 0.012816999999999999 12737600.0 2501.6 3248.8 2936.8 2734.9 3261.4 2634.5 2328.83 2265.3 4518.0 4042.1 4138.200000000001 True False 2923.808921752044 3414.150043253247 3353.2824003306414 3404.950622774327 2781.6523803504556 2913.2810413604348 2751.948266136212 2586.413212190297 3494.6802137634604 3128.986802639631 3110.570731490181 0.9399589895682375 1.0975960162840053 1.078028017940034 1.094638546008281 0.8942578775625042 0.9365744401397261 0.8847084678951622 0.8314915285502041 1.123485210731493 1.0059204797894525 1.0 11.602963596833876 -3.991563739841335 15.573369934818082 1.0192910344028128 1.0022318624789892 0.0 0.09946050530338701 0.0 0.0 0.014445700512490297 0.0 0.00010196151038159049 3.991563739841335 -0.017059171923823557 TS(ph)LADSSIFDSK ddPTM_A549_MK2206_60min_R1 1 TSLADSSIFDSK 12 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;C9J0L6;C9JDV9;C9JTI2;C9J1C4;C9JDB4 Q9H8V3-2 ECT2 Protein ECT2 1 T(0.165)S(0.835)LADSSIFDSK 155.66 9.3941e-14 2866100.0 1446.5 1981.1 1667.3 1439.3 2149.1 1817.8 1455.9 2002.0 2397.8 2128.8 2854.8 True False 1690.6338364703931 2081.92952803774 1903.7482110022056 1791.9285646126334 1832.970236895555 2010.1583894420176 1720.4181845251526 2285.7896308678623 1854.7021284997857 1647.90260148419 2145.8743715282403 0.787853128264151 0.970201031179211 0.8871666656079227 0.8350575357011533 0.8541833861365135 0.9367549266224895 0.8017329473485961 1.0652019806918975 0.8643106759222401 0.7679399238598452 1.0 11.067349901819673 -14.99999999956764 0.24486499647197849 1.6791200738961929 0.8755419474963851 0.0 0.1018959522538413 45.795298043576224 0.5854610171983561 15.113090884698233 0.037394056626652725 1.0000000009955455e-15 14.99999999956764 -0.8035781263998077 TS(ph)LADSSIFDSK ddPTM_A549_PD325901_60min_R1 1 TSLADSSIFDSK 12 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;C9J0L6;C9JDV9;C9JTI2;C9J1C4;C9JDB4 Q9H8V3-2 ECT2 Protein ECT2 1 T(0.171)S(0.829)LADSSIFDSK 213.18 1.3860999999999997e-31 8880900.0 5306.1 6164.6 5358.3 6090.7 6277.4 5682.9 5320.6 5237.6 5047.9 5918.6 6018.9 True False 5844.771365855634 6684.112476665582 5721.946460075452 6466.908706016673 5836.497079854346 5636.620346559491 5523.078344544033 5133.131959182285 4835.75431754511 5544.898585925405 5278.613456950708 1.1072550421663152 1.2662629175591857 1.0839866390559396 1.2251150342333281 1.1056875309119358 1.0678221454418815 1.0463123298546178 0.9724394485493425 0.9161031314345522 1.050446036851602 1.0 12.365943308663024 -7.601364380951744 1.142398330198346 0.9600888769886746 1.1714259717093904 0.6271214754819683 0.05938180127698592 0.1659885262792723 0.43590502364248934 0.009162690194665892 0.016453540356313016 2.5040074637317878e-08 7.601364380951744 0.21133709472071582 TS(ph)NERPGSGQGQGR ddPTM_A549_PD325901_60min_R1 1 TSNERPGSGQGQGR 14 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 T(0.234)S(0.766)NERPGSGQGQGR 44.045 0.01743 16028000.0 493.0 505.61 747.27 593.16 380.87 620.63 676.52 661.83 621.23 587.71 797.85 True False 543.0489970725821 548.2195291384494 797.9842358995542 629.7981460358992 354.1190051301695 615.5757950492206 702.265338805949 648.6292814544087 595.1218634855184 550.6018903007838 699.7195079878585 0.7760952651358765 0.7834847004836716 1.140434455220878 0.9000722987514983 0.5060870835922359 0.8797465098827887 1.0036383590696383 0.9269847046563459 0.8505148944566011 0.7868894378607747 1.0 9.450632903929913 -7.5228080745123735 24.99994928503597 0.9328588503866133 0.8264173330150195 0.07265330732497821 0.15035067253328716 4.758819800881923 1683376.0339538762 0.023035650260149972 0.034370289640759874 3.0004882160919893e-08 7.5228080745123735 -0.1064415173715938 TS(ph)NEVQYDQR ddPTM_A549_MK2206_60min_R1 1 TSNEVQYDQR 10 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 1 T(0.383)S(0.617)NEVQYDQR 109.44 0.00021331 4524200.0 958.23 1596.2 1344.7 999.49 1374.7 1096.8 1149.1 1084.7 1830.2 1477.5 1794.5 True False 1119.955797525768 1677.4397620785614 1535.3986801023607 1244.3650948688107 1172.483451054078 1212.8626480030828 1357.876595808676 1238.459546754431 1415.662622228837 1143.731723831685 1348.8761243195427 0.8302881023198062 1.2435832555971489 1.1382799742837109 0.922519920423787 0.8692298943652456 0.8991653318905962 1.0066725708364612 0.9181417955478952 1.0495126992799177 0.8479145736296984 1.0 10.397542147376823 -6.255302854793731 24.841638440902564 0.9898504772033047 1.0880037217125276 0.0982257412396047 0.11665414206998184 705.6732874321652 2856670.7851510616 0.014942112045147605 0.03844583206513334 5.555167331649956e-07 6.255302854793731 0.09815324450922291 TS(ph)NEVQYDQR ddPTM_A549_PD325901_60min_R1 1 TSNEVQYDQR 10 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 1 T(0.168)S(0.832)NEVQYDQR 131.06 1.1537e-06 3541900.0 1350.9 1027.9 1313.5 1168.5 1395.0 1399.3 1128.0 905.3 1380.9 1402.2 1559.1 True False 1488.042373519981 1114.5247404153645 1402.6420087171502 1240.6755911439548 1297.020012488741 1387.9045647364364 1170.9266572652843 887.243081305889 1322.865575209105 1313.6648526990512 1367.340583949201 1.0882748533815658 0.8151039715330873 1.025817579893658 0.9073639777154805 0.9485712833467156 1.0150393991289588 0.856353326311264 0.6488822841367894 0.9674733499011331 0.9607444320162563 1.0 10.41715692597797 -8.979811899543673 24.983404509561346 0.9856501385011139 0.909400826184677 0.058228531446142706 0.11226948798171102 253.4133124278715 313611.1136350594 0.01948483679317288 0.019879718605412256 1.047582175777343e-09 8.979811899543673 -0.07624931231643695 TS(ph)PAKQQAPPVR ddPTM_A549_MK2206_60min_R1 2 TSPAKQQAPPVR 12 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.405)S(0.595)PAKQQAPPVR;T(0.246)S(0.754)PAKQQAPPVR 127.03 8.3087e-08 495411000.0 10108.6 13120.5 11777.9 12196.1 18170.0 11453.2 11423.9 8801.5 18359.0 19326.1 21170.7 True False 11814.68454845808 13788.277407813413 13448.183322955007 15184.145047503727 15497.217069653452 12665.170021981141 13499.474756643232 10049.139578463288 14200.715813298659 14960.320587440627 15913.430908404427 0.7424347782990243 0.866455353793716 0.8450838414645431 0.9541716764223648 0.9738451223280105 0.7958792855469169 0.8483069951630416 0.6314879321941815 0.89237298323888 0.9401065473278657 1.0 13.957957291329231 -9.730873072708292 1.293834800165049 0.9779139085751858 0.842220540636549 0.23118385575528477 0.09133770470968229 0.37386538356675947 1.2689843489463697 0.025483813139009655 0.017689226755163948 1.858347498026024e-10 9.730873072708292 -0.13569336793863673 TS(ph)PAKQQAPPVR ddPTM_A549_PD325901_60min_R1 2 TSPAKQQAPPVR 12 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.407)S(0.593)PAKQQAPPVR;T(0.175)S(0.825)PAKQQAPPVR 107.97 3.3997e-05 794730600.0 13589.0 14662.5 15009.8 19204.0 17155.2 22479.2 19422.3 22019.0 20668.3 18909.2 19950.3 True False 14968.545276306922 15898.16033304822 16028.45528925975 20390.187464551575 15950.277934227131 22296.13684815502 20161.426254790367 21579.813771428664 19799.683226949328 17715.26988493574 17496.53957537154 0.8555146125795601 0.9086459790841597 0.9160928776923243 1.165384010747656 0.9116247167342191 1.274316944336781 1.1523093562552205 1.233376101512371 1.1316342378249318 1.0125013468304378 1.0 14.094781996972499 -6.163123409453677 5.631087667984743 1.0918715950741587 0.8900773766744468 0.46984769045915 0.1013597203973876 0.1743056245814701 8.118621098904377 0.014723901739588478 0.039826200370058275 6.868732298552423e-07 6.163123409453677 -0.2017942183997119 TS(ph)PAPWK ddPTM_A549_MK2206_60min_R1 1 TSPAPWK 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.159)S(0.841)PAPWK 82.45200000000001 0.014956 9215200.0 2359.2 2330.7 1910.0 1639.5 2758.7 2549.8 2162.8 2704.3 2686.6 2630.1 3311.4 True False 2757.3752830977883 2449.322674775408 2180.866720454755 2041.1775735999527 2352.898884427792 2819.618143579743 2555.7527642633418 3087.642806571409 2078.0893896186185 2035.9585833162191 2489.087990009325 1.1077853792896482 0.9840241424194216 0.876171002876674 0.8200503886535186 0.9452855398731714 1.132791671044614 1.0267828114239412 1.2404715377538107 0.8348798427213628 0.8179536406459427 1.0 11.281401515586236 -12.084551191249227 0.005045913080180106 8.544131138881715e-05 1.889455680463724 0.013711745067920722 0.13223104782548278 137057.79474711 98.15802088998969 19129.676119955366 17648.299598708367 8.230928114366562e-13 12.084551191249227 1.889370239152335 TS(ph)PAPWK ddPTM_A549_PD325901_60min_R1 1 TSPAPWK 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.337)S(0.663)PAPWK 129.47 0.0057309 11587000.0 4940.4 3889.3 3650.0 4061.2 4399.7 4099.8 4086.1 3229.4 4975.1 4579.8 5647.9 True False 5441.945771069743 4217.064960499538 3897.710949233037 4312.051100345596 4090.68025014101 4066.412588084358 4241.598771499716 3164.987083584709 4766.0138483762885 4290.630646406441 4953.24410498794 1.0986629481049963 0.8513743460074851 0.7869006385750349 0.870550897340864 0.8258588035307358 0.8209594564478382 0.8563274253389626 0.6389725635361989 0.9622004785867287 0.8662263670966177 1.0 12.274158006053886 -8.969430055387166 24.999957448423302 0.9833238848982374 0.839436409974539 0.11764462659192498 0.10704958996248141 160.10729339682032 130936.02318077088 0.016855589838292377 0.017762482668359326 1.072926432395784e-09 8.969430055387166 -0.14388747492369836 TS(ph)PAPWKR ddPTM_A549_PD325901_60min_R1 1 TSPAPWKR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.422)S(0.578)PAPWKR 56.431999999999995 0.0078607 63456000.0 1606.0 1254.9 1129.1 1281.9 1428.3 1658.8 960.0 1134.5 1516.0 1781.9 1798.5 True False 1769.0399377252868 1360.6548270719327 1205.7275158298698 1361.0800515938683 1327.9811353675045 1645.2912827733862 996.5333253321564 1111.8715075019666 1452.2877920320107 1669.3905298990433 1577.2959016308373 1.1215650379210373 0.8626503281122396 0.7644269629961086 0.8629199189489977 0.8419353236095047 1.0431088301644893 0.63179858915616 0.7049225870379505 0.9207453024701483 1.0583876672557033 1.0 10.623237620611654 -9.153339624808893 2.968771642619781 0.9704317045669868 0.8493633541729098 0.1705708995706101 0.13421516703872555 0.34031302507882 6.236589720407726 0.025205801283985408 0.024190182471320855 7.025227216930426e-10 9.153339624808893 -0.12106835039407704 TS(ph)PDPR ddPTM_A549_PD325901_60min_R1 1 TSPDPR 6 0 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 T(0.385)S(0.615)PDPR 81.635 0.042152999999999996 168570000.0 1335.3 1474.3 1276.4 1306.3 1275.7 1364.2 1023.0 1035.0 996.49 1337.6 1681.0 True False 1470.858673004095 1598.5444350563005 1363.0241796167268 1386.9871841774486 1186.099232926083 1353.0904074990688 1061.9308248070802 1014.3561130582075 954.6109906873204 1253.1437077237554 1474.247656736969 0.9977012113823704 1.0843120067047922 0.9245557714730108 0.9408101670294267 0.8045454422164996 0.9178175738084169 0.7203205105697833 0.6880500087097551 0.6475241702606547 0.8500225196202144 1.0 10.525763185712442 -6.356258267173922 1.180037919281237 0.8127197454250947 1.0417461485835935 0.449783306257976 0.09979437404249716 0.5514807276644592 1.3832186948273704 0.021732189963295782 0.09409864488179523 4.402929512804542e-07 6.356258267173922 0.22902640315849876 TS(ph)PDTLR ddPTM_A549_MK2206_60min_R1 2 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.31)S(0.69)PDTLR;T(0.039)S(0.953)PDT(0.008)LR 150.05 0.0031151 765038400.0 4292.0 4586.299999999999 3802.4 3773.8 5590.5 4818.8 4440.7 5326.3 6901.7 6298.0 6097.9 True False 5016.38467067468 4819.72308032885 4341.637496260296 4698.381169412318 4768.144855690568 5328.722217539438 5247.517708648149 6081.319336109638 5338.475969750172 4875.277425849035 4583.623136521671 1.0944147285375243 1.051509458080436 0.9472064711574416 1.0250365332123994 1.040256738757306 1.1625567937906853 1.1448405665894865 1.3267494196140457 1.1646847506318614 1.0636296398374254 1.0 12.162272715881247 -7.10830981512106 6.567084188049322 1.1111423369043862 1.026116115289739 0.26025614026802935 0.08490443860527105 0.4051360892728131 21.461411577690715 0.015461378269689297 0.026955811208880083 7.792739970708873e-08 7.10830981512106 -0.08502622161464735 TS(ph)PDTLRR ddPTM_A549_MK2206_60min_R1 1 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.417)S(0.573)PDT(0.011)LRR 61.78 0.0044637 9858700.0 1112.6 1419.1 1265.5 1299.9 1585.2 981.21 1275.0 1042.7 1355.1 1622.3 2166.4 True False 1300.3796795416235 1491.326128533822 1444.9669291808864 1618.3755583547277 1352.0191799017418 1085.0409909255159 1506.6509961326803 1190.5059181348258 1048.172013650037 1255.8213032637177 1628.4230904017036 0.798551486530962 0.915809986559413 0.887341218444918 0.9938299007756656 0.8302628400879665 0.6663139311404969 0.9252208501667806 0.7310789960864217 0.6436730232015263 0.7711885876992376 1.0 10.66925986824838 -6.973924591597803 24.590704283909623 0.8141366354377183 0.9008651507043397 0.1657681415112512 0.10704891397264173 414.6054629114284 390995.7762080912 0.02075474577997526 0.03922191746575667 1.0618799199294815e-07 6.973924591597803 0.0867285152666214 TS(ph)PDTLRR ddPTM_A549_PD325901_60min_R1 4 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.351)S(0.649)PDTLRR;T(0.345)S(0.655)PDTLRR;T(0.411)S(0.587)PDT(0.002)LRR;T(0.415)S(0.585)PDTLRR 122.94 0.00048063 1808213000.0 18109.4 17687.2 18470.100000000002 20137.800000000003 21782.9 18088.8 19682.8 20963.499999999996 21423.5 21126.699999999997 22836.6 True False 19947.852956564326 19177.762417233804 19723.59205573401 21381.666169737906 20252.94425092544 17941.49081012252 20431.839724841444 20545.366546952384 20523.144797228084 19792.756556494816 20027.84297313472 0.9960060593306183 0.9575550618685591 0.9848086028131521 1.0675970546812854 1.011239416950326 0.8958274155728689 1.0201717555030088 1.0258402052838076 1.0247306624461636 0.9882620201808429 1.0 14.289719428781183 TS(ph)PENVQDR ddPTM_A549_MK2206_60min_R1 1 TSPENVQDR 9 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 T(0.351)S(0.649)PENVQDR 171.49 1.6304e-07 50173000.0 3292.8 2856.6 2689.1 2627.9 3603.0 3269.0 3287.2 3622.9 4814.0 4279.6 4318.0 True False 3848.5441387692395 3001.9887384748918 3070.4548156936557 3271.7356179709154 3073.0034728652404 3614.923410213423 3884.4416897939973 4136.457169665926 3723.63668637833 3312.835387688715 3245.721429262625 1.1857284189800497 0.9249064665284275 0.9460007220617245 1.0080149172611528 0.9467859580183925 1.113750359973029 1.1967883795487892 1.2744338230547596 1.1472446935238925 1.020677670554536 1.0 11.66432346758325 -7.274183307348814 24.17489955542613 1.1015946777179968 0.99517953056897 0.26574509940792546 0.0973318427468647 659.7412742938458 1251511.1171807945 0.01631357291788271 0.02619437952329681 5.318837139950842e-08 7.274183307348814 -0.10641514714902678 TS(ph)PENVQDR ddPTM_A549_PD325901_60min_R1 2 TSPENVQDR 9 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 T(0.447)S(0.553)PENVQDR;T(0.322)S(0.678)PENVQDR 188.27 2.7811999999999997e-11 125497000.0 7762.8 7591.5 7484.8 7747.1 9184.8 7271.1 8281.6 7855.3 8466.2 8695.0 9223.2 True False 8550.87374132868 8231.26234737157 7992.76353775875 8225.62077205934 8539.69133383984 7211.886572325518 8596.760819865412 7698.619879136363 8110.3950560035655 8145.996216102021 8088.804870681984 1.0571244921881442 1.017611684169305 0.988126634965403 1.0169142294275446 1.055742037342513 0.8915886447533341 1.0627974042277277 0.951762343413691 1.0026691440412707 1.0070704320767248 1.0 12.981710843372872 -2.0000022743816337 0.9118107465339109 0.9980806734648884 33.558603159621796 0.13328004263686022 0.04433636225372912 1288.3955852767078 2.5347398634352416 0.00582756950910444 87379.85504843802 0.009999947630564674 2.0000022743816337 32.560522486156906 TS(ph)PGGRT(ph)SPEAR ddPTM_A549_MK2206_60min_R1 1 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 T(0.463)S(0.522)PGGRT(0.537)S(0.478)PEAR 50.675 0.059391 78704000.0 377.51 411.02 503.29 306.03 415.36 401.91 282.62 346.91 408.96 438.79 440.33 True False 441.22445876663494 431.93916239163667 574.6640899150125 381.00736373820854 354.26109422406483 444.43984943373397 333.968395707465 396.0855548673181 316.3312129749237 339.66703424711 330.9839085102389 1.3330692140067764 1.3050155952771183 1.736229693164178 1.1511356109519812 1.070327242851765 1.3427838574816555 1.0090170159953071 1.1966912731501123 0.9557298854761033 1.0262342836422287 1.0 8.370617268810856 -7.218535320245576 0.5805724876664147 0.9786691962365405 1.4447686085744111 0.46752774698594857 0.15891736853203076 0.5189212927931272 0.32400733802199666 0.03355939252486191 0.10806886311093378 6.045951789065581e-08 7.218535320245576 0.46609941233787067 TS(ph)PGGRTS(ph)PEAR ddPTM_A549_MK2206_60min_R1 1 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 T(0.406)S(0.593)PGGRT(0.217)S(0.784)PEAR 68.48100000000001 0.0012129 110240000.0 1619.9 1809.6 1469.6 1271.7 1879.1 1279.0 1206.8 1548.2 2048.5 2044.5 1986.0 True False 1893.2995172474161 1901.7009105734653 1678.0113782095846 1583.2665570887816 1602.6868792287175 1414.3429310685121 1426.0599389277784 1767.6620911636505 1584.5180207823032 1582.6460300330832 1492.8213891884147 1.2682692859034694 1.273897148276621 1.1240536814131863 1.0605867309749213 1.0735958707692634 0.947429438854324 0.9552783402326973 1.1841082288649785 1.0614250520912887 1.0601710569631524 1.0 10.543825847089119 -5.934243084169801 1.755214812212025 1.0329834904475101 1.2876627621622359 0.6670521989469897 0.061509835690739735 0.1702540150613939 0.9661176316684504 0.009044605379800522 0.04659665710047249 1.1634746247974212e-06 5.934243084169801 0.2546792717147257 TS(ph)PGGRTS(ph)PEAR ddPTM_A549_PD325901_60min_R1 4 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 T(0.438)S(0.562)PGGRT(0.235)S(0.764)PEAR;T(0.38)S(0.61)PGGRT(0.358)S(0.652)PEAR;T(0.456)S(0.541)PGGRT(0.186)S(0.817)PEAR;T(0.454)S(0.529)PGGRT(0.243)S(0.773)PEAR 70.438 0.00412 621715000.0 4868.280000000001 5651.72 6393.849999999999 5526.1900000000005 5944.280000000001 5216.849999999999 5007.57 5385.66 5027.37 5861.23 6148.17 True False 5362.504201761682 6128.010279113068 6827.775110343473 5867.530205411907 5526.774279452737 5174.365703241105 5198.135816597447 5278.238786331465 4816.087122050108 5491.15093751623 5391.984066460756 0.9945326498862553 1.1365037810906276 1.2662825086620026 1.0881950193267715 1.024998258772759 0.9596403920083365 0.9640488088477329 0.9789047447605029 0.8931938712518003 1.0183915363682754 1.0 12.396600517963755 -6.887515874729157 2.236784105445212 0.9527828878906776 1.1366926895843423 0.5266686769074309 0.06673573838948602 0.1606740004018593 1.6309082523811218 0.010244115433297025 0.02168850813656034 1.295639337257254e-07 6.887515874729157 0.18390980169366478 TS(ph)PHWK ddPTM_A549_PD325901_60min_R1 1 TSPHWK 6 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 T(0.333)S(0.667)PHWK 79.146 0.013408000000000002 11330000.0 1871.4 1300.2 1505.6 1524.7 1910.8 1768.1 1274.0 1419.8 1854.5 1545.7 2238.4 True False 2061.3831503481338 1409.7724170522977 1607.7790699082916 1618.8772561550597 1776.5919999021407 1753.701179811687 1322.4827671595497 1391.480975188447 1776.5618141974696 1448.1042382091878 1963.0909903866925 1.0500700988608171 0.7181391101869398 0.819003845354916 0.8246572696236413 0.9049972765410049 0.8933366758849219 0.6736736980790916 0.7088214361955536 0.9049818999207571 0.7376653681875124 1.0 10.938911328753665 -9.231161378531763 2.0747772201707297 0.9682705486684988 0.8213007220912668 0.0 0.12331025649092504 0.2663459834700286 2.3675206366136594 0.02064443493363047 0.01895918728825611 5.872710892073324e-10 9.231161378531763 -0.146969826577232 TS(ph)PITR ddPTM_A549_MK2206_60min_R1 1 TSPITR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.275)S(0.725)PITR 69.984 0.051398 107500000.0 3014.8 2633.0 1883.5 1953.2 3021.2 2624.0 2640.0 2773.2 3656.0 3915.4 3368.2 True False 3523.6245352166866 2767.008453547708 2150.60862197724 2431.7340876824787 2576.7854821594387 2901.6699383297696 3119.6538272864914 3166.3095925688094 2827.921837432319 3030.908420636602 2531.7829824090736 1.391756149598511 1.0929090181792793 0.8494442994995038 0.9604828314979055 1.0177750226078002 1.1460974177055003 1.2321963805594585 1.2506244076085713 1.1169684989119644 1.1971438475159488 1.0 11.305938030810468 -7.240550491143263 23.658616323571717 1.093229349618831 1.0466632412357735 0.0 0.14626198514317867 1807.129407030292 2046738.4840098182 0.02276682133466488 0.039399846149098146 5.7471099897221814e-08 7.240550491143263 -0.046566108383057525 TS(ph)PITR ddPTM_A549_PD325901_60min_R1 1 TSPITR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.265)S(0.735)PITR 93.561 0.036233999999999995 158850000.0 5906.4 6059.8 7072.6 6242.3 7291.5 5486.2 6313.4 5252.8 5834.6 7175.9 7289.6 True False 6506.013379938127 6570.480612869952 7552.589166998789 6627.872693708095 6779.370194309425 5441.522206143814 6553.659891825042 5148.028783258115 5589.392052368053 6722.8124493532405 6393.025412581682 1.0176736302555722 1.0277576247294484 1.1813795002496077 1.0367349206315097 1.0604322299372382 0.8511654271598423 1.0251265197424722 0.8052570498353764 0.8742952970854687 1.0515854412407821 1.0 12.642283113297024 -7.181426365944914 8.278638549385667 0.9294682628975209 1.0681617291147738 0.3911813279832812 0.08072042075270669 0.2545782175053873 24.28721966882449 0.011414993596678118 0.01980609488366355 6.585270728730146e-08 7.181426365944914 0.13869346621725287 TS(ph)PKPAVVETVTTAK ddPTM_A549_MK2206_60min_R1 1 TSPKPAVVETVTTAK 15 1 P56192;H0YI94;H0YIP0 P56192 MARS Methionine--tRNA ligase, cytoplasmic 1 T(0.437)S(0.563)PKPAVVETVTTAK 121.82 1.2984000000000003e-07 8644200.0 2684.2 2764.3 2645.3 2443.7 2746.4 2538.4 2173.8 2835.6 3552.7 2723.3 3463.0 True False 3137.227337610666 2904.9910627200643 3020.44331707799 3042.4066097018613 2342.4081981340805 2807.011803146451 2568.751321877034 3237.554983660795 2748.0191224961163 2108.104638586008 2603.0415260621753 1.2052160160335956 1.1159987397952393 1.1603515682852938 1.1687891181299546 0.8998735420397326 1.078358441477819 0.9868268700895392 1.2437584845442315 1.0556954604766755 0.8098620853640791 1.0 11.345982611757973 -2.0000000000000004 0.22593565859040568 1.0191136205534401 1.9563966043461598 0.2591540178207419 0.10919349563460505 48.77278207264174 0.5723576933200122 0.05127262154021769 17.057905096776693 0.00999999999999999 2.0000000000000004 0.9372829837927197 TS(ph)PKPAVVETVTTAKPQQIQALMDEVTK ddPTM_A549_PD325901_60min_R1 2 TSPKPAVVETVTTAKPQQIQALMDEVTK 28 2 P56192;H0YI94;H0YIP0 P56192 MARS Methionine--tRNA ligase, cytoplasmic 1 T(0.455)S(0.545)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.179)S(0.821)PKPAVVETVTTAKPQQIQALMDEVTK 386.63 0.0 101451000.0 21317.8 20072.5 23755.5 21532.6 26222.5 26429.4 23669.4 26297.1 24864.3 25476.6 26865.0 True False 23481.96736266509 21764.080019444875 25367.69108342614 22862.619797917254 24380.722062713983 26214.16772903964 24570.15196939267 25772.583710824147 23819.339938932393 23868.00312813623 23560.77531126631 0.9966551207436908 0.9237420981234735 1.0766916940672915 0.9703678888268499 1.0348013484537408 1.112619062094469 1.0428414024916954 1.0938767239336218 1.0109743683834735 1.013039800804985 1.0 14.524099394070754 -5.752467850526457 24.998247215486998 1.0240939911644364 0.960198622292055 0.26726060672369234 0.045084214787355484 221.9727851824718 618490.6119110788 0.0064028762743730695 0.02410102992780734 1.7682031074815944e-06 5.752467850526457 -0.06389536887238145 TS(ph)PLKDNPS(ph)PEPQLDDIK ddPTM_A549_PD325901_60min_R1 1 TSPLKDNPSPEPQLDDIK 18 1 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 2 T(0.465)S(0.535)PLKDNPS(1)PEPQLDDIK 98.12100000000001 3.6681e-07 2373200.0 1939.8 1577.9 2064.6 2037.3 2079.5 1761.7 1969.5 2005.4 2113.9 1914.1 2765.2 True False 2136.727067994716 1710.8751706405321 2204.7161714483645 2163.139393955995 1933.4430938855444 1747.3532992897733 2044.4504002517522 1965.4007237941332 2025.0601342852683 1793.2433993376508 2425.097930047036 0.8810889826429703 0.7054870442313845 0.9091245941583906 0.8919802236250475 0.797263924862632 0.7205289640636833 0.8430382851434371 0.8104417967797339 0.8350426220709328 0.7394519524837787 1.0 11.243827291896093 -10.42494217084711 0.6558114199495066 1.008632214004154 0.8169695772128726 0.0 0.09794010228180607 0.49197371408443064 0.36250637211661974 0.05058115296697223 0.012805964056006145 3.758874528308969e-11 10.42494217084711 -0.19166263679128137 TS(ph)PLKDNPS(ph)PEPQLDDIKR ddPTM_A549_MK2206_60min_R1 4 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 2 T(0.462)S(0.538)PLKDNPS(1)PEPQLDDIKR;T(0.466)S(0.534)PLKDNPS(1)PEPQLDDIKR;T(0.419)S(0.581)PLKDNPS(1)PEPQLDDIKR;T(0.426)S(0.574)PLKDNPS(1)PEPQLDDIKR 114.91 2.1406e-14 101946000.0 13369.8 13656.8 12548.099999999999 11775.099999999999 18876.0 13876.3 12462.699999999999 13871.800000000001 20724.1 18096.6 20568.0 True False 15626.295379773137 14351.872787090908 14327.609264365612 14660.000028604332 16099.365404886004 15344.680855657542 14727.011270198236 15838.170130605815 16030.124439587284 14008.565491365453 15460.397952078209 1.0107304759042524 0.9282990535933591 0.9267296552634775 0.9482291512835033 1.0413293017934189 0.992515257577499 0.9525635314075864 1.0244348288898233 1.0368507000450458 0.9060934611636178 1.0 13.916289834394401 -6.74552534520343 24.97770565113804 1.01279528730637 0.9497852414783764 0.05880728191011786 0.04454460110181932 165.3469635310958 259517.1693579888 0.004552599398350536 0.009453250338304941 1.7966962228428813e-07 6.74552534520343 -0.06301004582799352 TS(ph)PLKDNPS(ph)PEPQLDDIKR ddPTM_A549_PD325901_60min_R1 2 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 2 T(0.448)S(0.552)PLKDNPS(1)PEPQLDDIKR;T(0.442)S(0.558)PLKDNPS(1)PEPQLDDIKR 120.54 3.0276e-14 46370000.0 10992.8 12234.4 11767.2 12733.599999999999 13551.5 13120.5 12296.3 13112.2 12951.400000000001 13793.3 13829.3 True False 12108.78096352836 13265.435824630535 12565.79295392192 13520.125551896164 12599.689390137037 13013.65099808791 12764.242425293549 12850.6668846781 12407.097697706717 12922.388684020692 12128.3837711556 0.9983837246580322 1.0937513253974642 1.0360649193676235 1.1147508033222433 1.0388597217794444 1.0729913600720402 1.0524273197596354 1.0595531215989613 1.0229803023890098 1.0654666712273269 1.0 13.566099689225123 -8.972738700609204 1.1331269564779314 1.0063653190108384 1.0617417007400825 0.016750672497073293 0.03432614119295961 0.2857849684054592 0.7466942799864354 0.005918162880121744 0.005703726368913957 1.0647834675048954e-09 8.972738700609204 0.055376381729244084 TS(ph)PLKDNPSPEPQLDDIKR ddPTM_A549_MK2206_60min_R1 2 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 1 T(0.111)S(0.889)PLKDNPSPEPQLDDIKR;T(0.448)S(0.552)PLKDNPSPEPQLDDIKR 191.42 1.2263e-44 30395000.0 5908.4 7181.8 6399.1 5401.0 8466.0 7644.0 6217.9 5726.1 9100.8 9528.4 10344.0 True False 6905.593473488883 7547.322944052012 7306.588602545564 6724.245242460104 7220.662614842387 8452.883006323456 7347.6119441987385 6537.792210445795 7039.483330991257 7375.927822238794 7775.299320123349 0.8881450332871984 0.9706794083822202 0.9397179840569341 0.8648213998729285 0.928666835520338 1.0871456722503845 0.9449940949774489 0.8408412256908558 0.9053649308100953 0.9486358683515969 1.0 12.924682499371 -7.983508720198635 0.006912927127106448 1.8774005851296411 6.497341143729153e-07 0.036046561532817045 0.06332069235515796 6429.8271023423 25.26758908136457 3395.800864739787 3464.65736882556 1.0387027461014363e-08 7.983508720198635 -1.8773999353955269 TS(ph)PLKDNPSPEPQLDDIKR ddPTM_A549_PD325901_60min_R1 4 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 1 T(0.171)S(0.829)PLKDNPSPEPQLDDIKR;T(0.16)S(0.84)PLKDNPSPEPQLDDIKR;T(0.158)S(0.842)PLKDNPSPEPQLDDIKR;T(0.179)S(0.821)PLKDNPSPEPQLDDIKR 153.59 1.6983000000000001e-22 329486000.0 25103.199999999997 25320.9 24851.6 26159.5 30030.8 31554.600000000002 28847.0 31101.6 27748.200000000004 30231.300000000003 32778.3 True False 27651.65838400088 27454.78110670629 26538.179020810894 27775.31290246494 27921.540208635757 31297.629799494298 29944.788370684102 30481.254189266812 26582.039650964787 28322.49055869408 28746.776898763477 0.9619046504371868 0.9550559773498377 0.9231705910638077 0.9662061593993752 0.9712928968338285 1.0887352662078977 1.041674636295388 1.0603364090733227 0.9246963492490943 0.9852405596090444 1.0 14.811112589072973 -6.674150039184735 3.2831325942345932 0.9870483816825728 0.9476207311795622 0.18037655271461883 0.04659166400856592 0.5029002229063222 10.781421380365616 0.008324074772239539 0.018176954901130356 2.1176294145051002e-07 6.674150039184735 -0.03942765050301056 TS(ph)PLNSSGSSQGR ddPTM_A549_PD325901_60min_R1 1 TSPLNSSGSSQGR 13 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.317)S(0.683)PLNSSGSSQGR 225.32 4.1602e-46 40419000.0 5484.3 6111.8 6516.5 6570.7 7584.7 6195.4 6254.6 6195.6 6389.3 7009.6 6798.1 True False 6041.062098671727 6626.862835363964 6958.748876897836 6976.557215857581 7051.976837794511 6144.946716478322 6492.622225648444 6072.023897645823 6120.77994038926 6567.012659734178 5961.9767967064745 1.0132649462857588 1.111521071169681 1.1671881850902206 1.170175170710423 1.1828252739410485 1.0306894719672381 1.0890049470227912 1.0184581565295827 1.0266359882129217 1.1014824249839312 1.0 12.541575045207264 -7.839939459921453 1.291013100995132 1.0125852629262424 1.128521777773319 0.27573213930309526 0.05602657190685756 0.25208805976628557 0.8506133431974088 0.008590419750479085 0.013408890966533422 1.4456412771899847e-08 7.839939459921453 0.11593651484707657 TS(ph)PNNAR ddPTM_A549_PD325901_60min_R1 1 TSPNNAR 7 0 Q9Y232-2;Q9Y232 Q9Y232-2 CDYL Chromodomain Y-like protein 1 T(0.158)S(0.842)PNNAR 47.603 0.059078 6243400.0 588.88 500.42 340.42 475.86 581.56 201.43 195.98 301.66 588.96 464.23 601.76 True False 648.6626640894568 542.5921496241428 363.5229483117564 505.252791443528 540.7132318730838 199.7896208639037 203.4381261443709 295.64315465230794 564.2080593635702 434.9184385740128 527.7473348709332 1.2291159447505213 1.0281286399235727 0.6888200551513164 0.9573763012315231 1.0245683798769378 0.3785705917638876 0.3854839479087546 0.5601982902000082 1.069087463040536 0.8241035242373649 1.0 9.043703577741857 -8.790669581157774 24.950996895061614 1.0326246947246382 0.7739910849382381 0.07028981218770991 0.26530863624266315 279.5729353503726 238643.1077349633 0.047876936004619904 0.050972739501467405 1.61931156967916e-09 8.790669581157774 -0.25863360978640015 TS(ph)PQELSEELSR ddPTM_A549_PD325901_60min_R1 1 TSPQELSEELSR 12 0 A0A1B0GVY1;Q96PU5-4;Q96PU5-7;Q96PU5;Q96PU5-9;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-3;K7ERN1 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 T(0.198)S(0.802)PQELSEELSR 59.11600000000001 0.010681 2878300.0 2365.3 2332.0 2068.7 2147.6 2256.7 2180.5 2348.1 2145.5 1823.7 2657.2 2524.8 True False 2605.4235147581717 2528.5258241547126 2209.0944221036666 2280.2523744465198 2098.197177192359 2162.742730942471 2437.4582304296223 2102.70631938781 1747.0562310875832 2489.4239385194096 2214.2656060258773 1.17665356299976 1.1419252583220418 0.9976646054077081 1.0298007466859742 0.9475815238616131 0.9767313934953457 1.1007975844435063 0.9496179291524597 0.7890003016499756 1.124266181863964 1.0 11.112612571602371 -4.857824844175791 0.4150417848449992 0.9116580363327677 1.490117938863773 0.1610774170519752 0.09693809054295356 4.709837588859596 0.42398797301708574 0.02222987749449676 1.4442636237090252 1.3873152358151136e-05 4.857824844175791 0.5784599025310054 TS(ph)PQPESGIKR ddPTM_A549_MK2206_60min_R1 1 TSPQPESGIKR 11 1 A0A1B0GVV3;Q5EBL4-3;Q5EBL4-2;Q5EBL4 A0A1B0GVV3 RILPL1 RILP-like protein 1 1 T(0.461)S(0.534)PQPES(0.005)GIKR 44.457 0.023409 14198000.0 3445.8 2673.9 2187.1 1984.0 3776.9 2300.5 1858.7 2405.2 3907.5 3823.4 3874.4 True False 4027.3667982783786 2809.9900888496863 2497.263667176226 2470.080089065144 3221.3230132291746 2543.9373830516893 2196.4017305975012 2746.1444656160756 3022.4574889952914 2959.6912845333754 2912.2795519997944 1.382891555006414 0.9648764957746353 0.8574944893121312 0.8481603654322943 1.1061173749673747 0.8735210125363229 0.7541864341592082 0.942953592394783 1.0378321981211729 1.0162799386827492 1.0 11.507933132275006 -5.260956720298568 24.074098478387178 0.9703959649876991 1.3828917646221706 0.6046124793752166 0.10025097498791403 13.693664104462629 682655.4601503258 0.014799748920852467 0.12090444892837432 5.483316062915004e-06 5.260956720298568 0.41249579963447147 TS(ph)PQVLGSILK ddPTM_A549_MK2206_60min_R1 1 TSPQVLGSILK 11 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 T(0.22)S(0.78)PQVLGSILK 89.663 0.00030125 34197000.0 2672.4 2456.7 2786.3 2631.4 3594.6 2759.6 2904.4 2669.3 3648.3 3606.0 3885.5 True False 3123.4357860929667 2581.735536585892 3181.439237279101 3276.093118128035 3065.839101737826 3051.6190403257733 3432.0918848374577 3047.681449388405 2821.9658751379447 2791.4020955242345 2920.6231156553813 1.069441575446846 0.883967370780244 1.0893015330275482 1.1217103297468378 1.0497208918549077 1.0448520468006353 1.1751231668476692 1.0435038444542721 0.96622048220169 0.9557556675359841 1.0 11.51206048594608 -8.66166171909743 5.760509093112588 0.9841739364410269 1.0607365928498613 0.23876976617300105 0.06794031731930156 0.24790054619705723 12.159650568336003 0.011602311418402905 0.013135846530983037 2.179406696074783e-09 8.66166171909743 0.07656265640883442 TS(ph)PQVLGSILK ddPTM_A549_PD325901_60min_R1 3 TSPQVLGSILK 11 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 T(0.133)S(0.867)PQVLGSILK;T(0.121)S(0.879)PQVLGSILK;T(0.156)S(0.844)PQVLGSILK 137.09 3.2087e-08 83007800.0 11996.599999999999 12011.5 12561.6 13614.4 14438.6 13387.1 13024.8 13568.4 13884.900000000001 14381.3 15192.7 True False 13214.486000569845 13023.751259362918 13414.105715037183 14455.330567454223 13424.482546465902 13278.07989607885 13520.465891444035 13297.767617796118 13301.36593904041 13473.262263671988 13324.094214460296 0.9917736836646279 0.9774586587078149 1.006755543688606 1.0849015576433125 1.0075343457040897 0.9965465330970485 1.0147380882950094 0.998024136107083 0.9982941973349888 1.011195361336443 1.0 13.701749839984325 -7.921301336813868 1.4337434330615668 0.9991661713138522 1.013367055987327 0.02108642254062032 0.025931394584655664 1.0322001168409525 4.281691704294768 0.004608044254058901 0.006848090926670628 1.1986673148454614e-08 7.921301336813868 0.01420088467347469 TS(ph)PSGGTWSSVVSGAK ddPTM_A549_MK2206_60min_R1 2 TSPSGGTWSSVVSGAK 16 0 F8WB06 F8WB06 ATXN2 1 T(0.286)S(0.711)PS(0.002)GGTWSSVVSGAK;T(0.11)S(0.871)PS(0.019)GGTWSSVVSGAK 154.69 3.6753e-20 19918000.0 6784.799999999999 6114.4 5080.4 4902.5 8252.0 6108.3 5780.5 5809.4 9374.0 8904.900000000001 9846.2 True False 7929.90836756607 6425.596843286025 5800.877113402272 6103.612720081589 7038.141731358298 6754.676251638613 6830.742025996045 6632.900240541342 7250.803967202013 6893.276905278359 7401.116798704414 1.0714475373438537 0.8681928711638282 0.7837840249214458 0.8246880688533443 0.9509567167741961 0.9126563511092054 0.9229339587225249 0.896202616570306 0.9796905202835452 0.9313833429145513 1.0 12.853527268698894 -8.725366651232592 0.9567429901355865 0.9960974141690984 0.892200989148373 0.09594283902751688 0.07303125250006523 0.4753420298666599 0.8699362480461552 0.015971124045699614 0.016995170575228292 1.882059498013605e-09 8.725366651232592 -0.10389642502072538 TS(ph)PSGGTWSSVVSGAK ddPTM_A549_PD325901_60min_R1 1 TSPSGGTWSSVVSGAK 16 0 F8WB06 F8WB06 ATXN2 1 T(0.126)S(0.872)PS(0.001)GGTWSSVVSGAK 146.78 1.8815e-14 14336000.0 7031.3 5754.7 5246.7 6254.8 5890.4 6642.2 5790.6 5400.9 7153.9 7628.3 8266.6 True False 7745.112399830518 6239.668765121406 5602.7726129701305 6641.14479031854 5476.678624776825 6588.108125414387 6010.964451737901 5293.174812575917 6853.246461357383 7146.6478361461795 7249.8606062949575 1.0683119056255428 0.8606605152799193 0.7728110810993135 0.9160375834746564 0.7554184724629737 0.9087220407650349 0.8291144862176606 0.7301071151602451 0.9452935488727604 0.9857634821200342 1.0 12.823737541232378 -8.968213335995367 15.274412677982314 0.9758732721552078 0.8512997608217676 0.2789063866260123 0.08836066057577993 2.447298327092015 1175.7480599992293 0.014789251070666866 0.01554194791353502 1.0759365576323463e-09 8.968213335995367 -0.12457351133344019 TS(ph)PSGGTWSSVVSGVPR ddPTM_A549_PD325901_60min_R1 1 TSPSGGTWSSVVSGVPR 17 0 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 T(0.139)S(0.861)PSGGTWSSVVSGVPR 117.0 1.3449e-09 42459000.0 2861.0 2369.1 2368.2 2431.8 2307.4 3253.6 2979.9 2823.1 3397.6 3018.6 2939.9 True False 3151.446613843116 2568.752371357174 2528.9202931434734 2582.006762981488 2145.336184097864 3227.103760327643 3093.3017251638466 2766.791055820894 3254.8106874722694 2828.0050808425026 2578.3109375615786 1.2222911394944387 0.9962927023016687 0.9808437982794984 1.001433428903422 0.8320703887355039 1.2516348254643237 1.1997395969972953 1.0731021675909924 1.2623809797550973 1.0968440771216952 1.0 11.332210544105543 -7.277590273529914 24.956518335966635 1.1368568531320928 1.0042980002332287 0.2829675581184419 0.11081753498831882 1009.7437076383743 1560263.2005568033 0.019251571236819073 0.030828125042368384 5.2772750063077516e-08 7.277590273529914 -0.13255885289886415 TS(ph)PSGGTWSSVVSGVPRLS(ph)PK ddPTM_A549_PD325901_60min_R1 1 TSPSGGTWSSVVSGVPRLSPK 21 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 2 T(0.459)S(0.492)PS(0.028)GGT(0.015)WS(0.018)S(0.018)VVS(0.129)GVPRLS(0.841)PK 45.527 0.008217799999999999 5182200.0 3708.8 3433.3 3162.5 3578.4 3907.7 3964.2 3380.2 3899.6 4130.1 3967.2 3994.8 True False 4085.3146457257467 3722.6362401673982 3377.126267657395 3799.4296408639507 3633.2366328331527 3931.9168695263193 3508.835360716413 3821.8194188229827 3956.5262598096324 3716.710314953414 3503.4649251236433 1.1660783632881864 1.062558444205352 0.9639389404014685 1.0844777162225656 1.037040961015167 1.1222937730388596 1.0015328926384444 1.0908684689309696 1.1293180734983381 1.0608669972119802 1.0 11.774566737450332 -11.116126406331457 1.4868872128706567 1.0002633499067934 1.076918732383391 0.037649728958478734 0.05762380715490692 0.5313215172019601 2.113479524738167 0.03962491633411766 0.008710460624392267 7.65373803767444e-12 11.116126406331457 0.07665538247659764 TS(ph)PSKRPNAR ddPTM_A549_MK2206_60min_R1 1 TSPSKRPNAR 10 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.077)S(0.695)PS(0.228)KRPNAR 49.842 0.0058258 70715000.0 2438.2 3656.9 3270.1 3437.9 5855.8 3630.9 3370.5 3752.4 5753.1 5327.9 6172.7 True False 2849.7085517332266 3843.0205901172094 3733.8493521251794 4280.185654333195 4994.419577131352 4015.119428003643 3982.8762215413344 4284.314191243041 4450.032035812874 4124.323689612745 4639.848232146693 0.6141814148120892 0.8282642875021756 0.8047352338500219 0.9224839779625519 1.0764187376923342 0.8653557674980222 0.8584065732897042 0.9233737779523968 0.9590899988886064 0.8888919385418275 1.0 12.17986190072393 -4.552481362337175 0.6306971174626549 0.9673622261503857 5.017340422020351e-15 0.6327073419801743 0.0689407731768274 2.832854509263063 0.40839862139953104 0.011293653167913921 2.438729204345774 2.8023258803538414e-05 4.552481362337175 -0.9673622261503807 TS(ph)PSKRPNAR ddPTM_A549_PD325901_60min_R1 1 TSPSKRPNAR 10 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.223)S(0.771)PS(0.006)KRPNAR 74.21600000000001 0.00033501 109030000.0 3080.3 3351.9 3122.3 3796.6 3742.6 4269.8 4025.4 4147.2 3921.7 3759.8 3975.6 True False 3393.009788402991 3634.3763764940713 3334.1980539151564 4031.107359295798 3479.732687269074 4235.028164447677 4178.588799783399 4064.480842584539 3756.884587079113 3522.4055863485196 3486.6264034048154 0.9731498003599112 1.0423761986500684 0.9562819953004408 1.1561626893432795 0.9980228119281696 1.214649255312247 1.1984618701053997 1.165734544606049 1.0775128024644054 1.0102618344508505 1.0 11.767616070391083 -6.24056654435612 24.90111835003828 1.0744855829864204 0.9957800207232519 0.2310068652655789 0.07965005342229997 1263.7997550439527 1507700.7735002679 0.012411557675554876 0.03279896821151219 5.746897558114815e-07 6.24056654435612 -0.0787055622631685 TS(ph)PSSDKVQK ddPTM_A549_MK2206_60min_R1 1 TSPSSDKVQK 10 1 F8WDU9;P38435 F8WDU9 GGCX Vitamin K-dependent gamma-carboxylase 1 T(0.094)S(0.906)PS(0.001)SDKVQK 81.865 0.00090358 2290100.0 771.82 671.6 816.43 621.09 1043.3 735.09 611.66 740.05 1127.0 973.68 1116.0 True False 902.0843468127057 705.7815713644671 932.2120505659035 773.25707788179 889.8319520511525 812.8767358867495 722.7907045447175 844.9543538080732 871.7362994491858 753.7250117498712 838.8663999669036 1.0753611622164105 0.841351580409363 1.1112759440629434 0.9217881153808257 1.0607552669724996 0.9690181129186013 0.8616279118739698 1.0072573580744322 1.0391837120709317 0.8985042335461385 1.0 9.712297251389932 -8.504808737236761 24.887838734849907 1.0187516952767697 0.974878881645044 0.0 0.0878078722622888 1553.6268272295476 2139813.648609787 0.012008980259658396 0.01437065562991936 3.1274563918845595e-09 8.504808737236761 -0.04387281363172568 TS(ph)PSSDKVQK ddPTM_A549_PD325901_60min_R1 2 TSPSSDKVQK 10 1 F8WDU9;P38435 F8WDU9 GGCX Vitamin K-dependent gamma-carboxylase 1 T(0.14)S(0.85)PS(0.008)S(0.001)DKVQK;T(0.103)S(0.896)PS(0.001)SDKVQK 114.86 7.6905e-05 17216700.0 4864.2 4853.5 4788.2 4917.9 5900.4 5714.5 5519.1 5086.9 6641.200000000001 6554.700000000001 6421.9 True False 5358.010003165221 5262.521478359733 5113.156045785656 5221.667513638733 5485.976259274956 5667.963006636433 5729.132370667406 4985.437788904147 6362.093459395112 6140.835123367903 5632.047011778192 0.951343266837105 0.9343887697233922 0.9078681401438252 0.9271349302871158 0.9740643584476902 1.0063770765377367 1.017238023526114 0.8851910821195554 1.1296236423613275 1.090338044147304 1.0 12.459443661140172 -7.808497247594513 0.8076541470155235 1.054190379765466 0.9315251112144186 0.3793460450042593 0.056608667904404025 0.4745090354326182 0.6242401445192489 0.013352966548363078 0.023549202763179813 1.5541851406184787e-08 7.808497247594513 -0.12266526855104731 TS(ph)PTFR ddPTM_A549_PD325901_60min_R1 1 TSPTFR 6 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 1 T(0.159)S(0.84)PT(0.001)FR 67.98100000000001 0.054007000000000006 5454500.0 3089.0 3410.6 2885.8 3492.1 3819.0 2867.3 3268.4 3143.0 3448.2 3604.7 3864.7 True False 3402.5930059983875 3698.023231501741 3081.6477417251244 3707.799085865473 3550.766614834765 2843.9496594502866 3392.780750537107 3080.3103993642 3303.2841454385084 3377.098626818051 3389.3664003517915 1.003902382948395 1.0910662332399097 0.909210565551506 1.0939505051683496 1.0476195829598773 0.8390800295757653 1.0010073712257728 0.9088159955337038 0.9746022575475025 0.9963805112564793 1.0 11.726799889438455 -5.7461166430142505 24.997805061494507 0.9805394322066819 1.0474842765232018 0.13775774131857121 0.06907655000096942 366.3889647231838 597723.6720224377 0.00881276077114217 0.033876748675673383 1.7942516611651966e-06 5.7461166430142505 0.06694484431651981 TS(ph)PTGPK ddPTM_A549_PD325901_60min_R1 2 TSPTGPK 7 0 Q9UPY8-2;C9JB30;Q9UPY8 Q9UPY8-2;C9JB30 MAPRE3 Microtubule-associated protein RP/EB family member 3 1 T(0.462)S(0.537)PTGPK;T(0.113)S(0.886)PTGPK 98.62899999999999 0.01149 166668000.0 21981.0 22816.4 18208.1 17620.9 21007.0 17593.0 12938.2 15127.900000000001 19244.1 23175.0 25099.0 True False 24212.49493844306 24739.21810216276 19443.811160200017 18709.302973032532 19531.540790215746 17449.72844094056 13430.570281054697 14826.162166892036 18435.33740016042 21711.726544929763 22011.982115669955 1.0999688629224624 1.123897792218872 0.8833285007240806 0.8499599388513812 0.8873140404885017 0.7927377166329058 0.6101481552401273 0.6735496189749103 0.8375137369858491 0.9863594487237728 1.0 14.426001441166688 -5.778844987144556 6.673980956006317 0.8660287281124287 1.1130969011712453 0.4504633581946209 0.11375711317873675 0.12095161198243894 21.83603483633119 0.01874513048124036 0.06303310512624151 1.6640064787014907e-06 5.778844987144556 0.24706817305881656 TS(ph)PTPGDFPK ddPTM_A549_PD325901_60min_R1 2 TSPTPGDFPK 10 0 Q9UPU7;C9JW56;Q9UPU7-2 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 T(0.204)S(0.793)PT(0.003)PGDFPK;T(0.137)S(0.861)PT(0.001)PGDFPK 121.9 4.034e-05 10167100.0 8570.0 8955.6 9237.900000000001 8702.3 10587.3 9413.5 9025.8 9972.5 9752.9 10855.8 11009.0 True False 9440.020091099444 9710.319841680934 9864.839446005451 9239.821306642743 9843.684572202184 9336.839577035978 9369.281758107278 9773.590664225088 9343.019529623349 10170.362935337578 9654.962791800883 0.9777375940916136 1.0057335332174517 1.021737696843617 0.957002269805671 1.0195466087721816 0.9670508088301429 0.9704109648215103 1.0122867249705971 0.96769088924481 1.0533818881181376 1.0 13.237054984004995 -6.242276679956842 24.917106164122192 0.9851182707254833 1.0021359952829327 0.0 0.029285794766443888 1416.7401741785272 1842173.6724052355 0.0028487828458098564 0.007521020323794218 5.724312307962679e-07 6.242276679956842 0.017017724557449432 TS(ph)PTPPESATTVK ddPTM_A549_MK2206_60min_R1 2 TSPTPPESATTVK 13 0 Q5M775;Q5M775-4;J3KSG2 Q5M775 SPECC1 Cytospin-B 1 T(0.1)S(0.898)PT(0.001)PPESATTVK;T(0.125)S(0.873)PT(0.002)PPESATTVK 115.8 1.7836e-05 10316900.0 4367.7 4760.6 4638.1 4092.0 6172.0 4481.5 4173.6 4450.4 6884.7 6262.4 6858.2 True False 5104.860979987371 5002.894205833359 5295.852322587016 5094.540183696862 5264.106975998959 4955.729355421059 4931.889096046553 5081.257828778392 5325.32644260675 4847.719490574311 5155.1196633091595 0.9902507242112152 0.9704710137847538 1.0272995911771945 0.988248676351111 1.0211415679572875 0.9613218856378383 0.9566973063978673 0.9856721396679753 1.0330170375110812 0.9403699248879271 1.0 12.33179020122909 -8.739574177348137 24.758200396482668 1.0155913790897038 0.9876162851705789 0.0 0.031415371078123776 233.09854565863054 263939.90312981396 0.003997348453984627 0.004530586635358989 1.8214859373500723e-09 8.739574177348137 -0.027975093919124894 TS(ph)PTTQSK ddPTM_A549_MK2206_60min_R1 2 TSPTTQSK 8 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 T(0.178)S(0.821)PT(0.001)TQSK;T(0.12)S(0.878)PT(0.002)TQSK 79.97399999999999 0.0039949 11415000.0 1919.5 1487.3 1167.8 781.28 2140.9 1822.2 1618.9 1963.1 1936.4 2196.0 2495.4 True False 2243.464672730672 1562.9972172280693 1333.4116000769964 972.6936350729919 1825.976446033082 2015.0239945215342 1913.033174618978 2241.375436741611 1497.808491795388 1699.922074811763 1875.7233104636307 1.1960530960060123 0.8332770662437076 0.7108786208704797 0.5185698922900132 0.9734785700252068 1.0742650492643673 1.0198909209835032 1.1949392664889367 0.7985231528765125 0.9062754966731131 1.0 10.873231315040895 TS(ph)PTVATQTGASATSTR ddPTM_A549_MK2206_60min_R1 2 TSPTVATQTGASATSTR 17 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.359)S(0.641)PTVATQTGASATSTR;T(0.385)S(0.615)PTVATQTGASATSTR 254.89 3.4403999999999996e-86 88687000.0 8415.6 8758.400000000001 8695.8 7638.3 12722.7 9718.8 8225.5 9314.9 12852.8 13202.2 13343.8 True False 9835.947538334074 9204.165149848946 9928.995197764636 9509.683842896315 10851.207683658775 10747.236965182681 9719.966877403425 10635.315600684846 9941.661321704076 10219.813850673885 10030.166189855177 0.9806365470078111 0.9176483196418346 0.9899133284358869 0.9481083027831289 1.081857217344417 1.0714914151724397 0.9690733626362544 1.0603329395919416 0.9911761314343307 1.0189077286685961 1.0 13.292057889716252 TS(ph)PTVATQTGASATSTR ddPTM_A549_PD325901_60min_R1 2 TSPTVATQTGASATSTR 17 0 Q6P1L5;Q6P1L5-2 Q6P1L5 FAM117B Protein FAM117B 1 T(0.047)S(0.952)PT(0.001)VATQTGASATSTR;T(0.387)S(0.613)PTVATQTGASATSTR 276.14 2.810099999999999e-115 84260000.0 11550.1 12483.2 12833.6 12306.0 13436.5 14266.1 13100.7 14490.7 14222.900000000001 14226.3 15287.6 True False 12722.657649265775 13535.203073794208 13704.56527070607 13066.113671046223 12492.766593408569 14149.921611510374 13599.254307478117 14201.671620765757 13625.16097446707 13328.048990124445 13407.322116080957 0.9489335408751025 1.009538143158347 1.022170210579829 0.9745505894405653 0.9317868613318796 1.0553876075326578 1.0143154755092334 1.0592474394071614 1.0162477530188399 0.9940873259201082 1.0 13.710733491836914 -7.271936538581447 24.998072795848895 1.0156848744270774 0.9815109417546369 0.34175011950479195 0.03046545798290999 820.5598478470222 1954090.083092659 0.004610070782974741 0.0074118290258785415 5.3464247849054223e-08 7.271936538581447 -0.03417393267244051 TS(ph)PVREIGQSPSR ddPTM_A549_MK2206_60min_R1 1 TSPVREIGQSPSR 13 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 T(0.453)S(0.547)PVREIGQSPSR 50.04 0.008116700000000001 13518000.0 1143.0 1776.7 1342.1 1778.6 1907.6 1513.8 1042.1 1239.3 2354.1 1882.5 2081.4 True False 1335.9104563329813 1867.1264411007285 1532.4299610064538 2214.357079844389 1626.9945669824401 1673.9893112208858 1231.436080839111 1414.9745701970742 1820.9001087252234 1457.241942546968 1564.53093628236 0.8538728288156276 1.193409729268375 0.9794820450452808 1.4153488617528691 1.0399248293859285 1.0699624228579467 0.7870960249371933 0.9044081758839094 1.1638632809984877 0.9314241788082936 1.0 10.611514470680921 -6.918132596193905 24.75192969632009 1.0406483865045522 1.1221544904025955 0.05712290264378039 0.16399738427380214 70.59757828712526 21338.27016682295 0.02363830285867858 0.044672193002727054 1.2074451288984598e-07 6.918132596193905 0.08150610389804336 TS(ph)PVTR ddPTM_A549_MK2206_60min_R1 1 TSPVTR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.3)S(0.7)PVTR 99.79899999999999 0.033571 209760000.0 3658.2 2403.4 2704.8 1664.4 4127.2 3778.4 3434.8 4224.2 4088.9 4103.5 4474.4 True False 4275.614725596951 2525.722794248601 3088.3813117727873 2072.178074717756 3520.0943472687823 4178.227780101066 4058.858699228653 4822.993286069942 3162.770678631565 3176.516499995479 3363.282992842218 1.2712622561635072 0.750969454436001 0.9182638863115355 0.616117668102206 1.0466244900474602 1.2423063384773818 1.2068145047166023 1.4340135208170999 0.9403819676674886 0.9444689925753444 1.0 11.715654459658964 -6.93295039224987 24.999957820716983 1.0501250314354613 0.8751128992167471 0.17353930886200064 0.20799067576489277 90.3719244558565 33694.62732888421 0.03123696425810154 0.05903231155422276 1.1669429047455471e-07 6.93295039224987 -0.17501213221871426 TS(ph)PYGSSLDLSTGSSSRPPPK ddPTM_A549_PD325901_60min_R1 1 TSPYGSSLDLSTGSSSRPPPK 21 1 J3KNZ9 J3KNZ9 FBRS 1 T(0.056)S(0.944)PYGSSLDLSTGSSSRPPPK 152.07 7.274200000000001e-23 15909000.0 4359.9 4516.7 4908.3 4981.8 5681.6 5931.1 4611.4 4645.3 4934.8 5810.5 5792.4 True False 4802.513838411261 4897.338160360029 5241.406754005621 5289.514471511298 5282.544016455933 5882.799088049935 4786.889350454907 4552.6458473326475 4727.407517229263 5443.624038373869 5079.97152104891 0.9453820397441204 0.9640483494972092 1.0317787673194234 1.0412488435405878 1.039876699026296 1.1580378086126075 0.942306335895858 0.8961951515808142 0.9305972479651127 1.0715855425208902 1.0 12.310604693754671 TS(ph)PYILR ddPTM_A549_MK2206_60min_R1 1 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.253)S(0.747)PYILR 130.28 0.0057089 46262000.0 2020.8 2196.9 1717.1 2001.2 2913.3 2032.0 1807.9 2523.1 3083.5 2660.7 3245.6 True False 2361.861636183455 2308.7128262814135 1960.6105998391924 2491.494089837281 2484.7574292251734 2247.0248912675647 2136.3720281633505 2880.7571516696844 2385.0921733376795 2059.6460220635963 2439.627945996938 0.9681237010171632 0.9463380799804592 0.803651476060626 1.0212598580555892 1.018498510521773 0.9210522837937622 0.8756958337310471 1.1808182294339484 0.977645864916106 0.8442459537501058 1.0 11.252445431879655 -6.3226187372708464 24.999949594829662 0.9936725913006986 0.9100659476015875 0.09886608963955068 0.09255404590812229 283.12700957551783 115694.66431232836 0.010838347340598305 0.025186049447393194 4.757527011474979e-07 6.3226187372708464 -0.08360664369911108 TS(ph)PYILR ddPTM_A549_PD325901_60min_R1 2 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.224)S(0.776)PYILR;T(0.135)S(0.865)PYILR 107.01 0.0093663 7581700.0 1384.92 1546.32 1677.23 1739.3600000000001 1532.67 1395.15 1257.83 1535.82 1798.26 1513.96 1921.4499999999998 True False 1525.5160588757808 1676.6338132105116 1791.0569138033243 1846.7963168268282 1425.020546624458 1383.7883609605078 1305.6974089609862 1505.1868652725186 1722.6853858176016 1418.3683072259703 1685.1238310751041 0.9052842472131594 0.9949617839899778 1.062863678487435 1.095941012031488 0.8456473763802266 0.8211790347049183 0.7748376617093802 0.8932203304680664 1.0222900857787605 0.841699749935324 1.0 10.718638896196074 -5.249137625748319 21.652236623267566 0.9743884862451161 0.9052839835425925 0.0 0.1087278354526184 1007.2688233205553 1772658.1963597583 0.015341035854645527 0.30964926929748204 5.634590701709336e-06 5.249137625748319 -0.06910450270252355 TS(ph)QSEEEEAPR ddPTM_A549_PD325901_60min_R1 1 TSQSEEEEAPR 11 0 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 T(0.073)S(0.463)QS(0.463)EEEEAPR 69.45100000000001 0.0035603 4745600.0 267.08 319.93 155.7 213.26 299.34 294.43 227.8 257.54 144.98 0.0 264.38 True False 294.1937649860957 346.89162389443277 166.26673830016 226.43258585139912 278.31539106693856 292.03225969795557 236.46905365694306 252.4031626637785 138.8869947815309 0.0 231.86293604290302 1.2688261867418915 1.4961064058562827 0.7170906274963871 0.97657948146357 1.2003444613305516 1.2595038460304802 1.0198656917429345 1.088587796615647 0.5990047273266297 0.0 1.0 7.85712840923817 -8.631879690480986 7.920221108164059 0.8109093241208759 1.1276026067226212 0.32657097050809136 0.31905536302867094 0.23116126310181792 15.522405043411016 0.039446387660090225 0.04472009827949921 2.3341045731572015e-09 8.631879690480986 0.31669328260174534 TS(ph)RDT(ph)SPSSGSAVSSSK ddPTM_A549_MK2206_60min_R1 2 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 T(0.45)S(0.542)RDT(0.409)S(0.235)PS(0.162)S(0.191)GS(0.012)AVSSSK;T(0.474)S(0.528)RDT(0.548)S(0.397)PS(0.05)S(0.002)GSAVSSSK 92.307 1.0086e-05 38469000.0 10303.300000000001 11404.400000000001 9581.6 9094.5 8409.5 6415.299999999999 5351.9 5760.0 8084.0 13483.6 11865.3 True False 12042.2451485001 11984.835247869161 10940.414957439414 11322.652908267619 7172.473689997285 7094.162787868512 6324.270953884309 6576.497639260183 6252.986907495313 10437.6453952331 8918.8185443793 1.3502063180878596 1.343769377999296 1.2266663911818385 1.2695238558702633 0.8041954945386153 0.7954150824538639 0.7090929053456196 0.7373731853088026 0.7011003617105751 1.1702946240352623 1.0 13.12263689693162 -6.746909581997272 7.290064738286109 0.8267344163792961 1.2975355260526982 0.7238134564832643 0.1340721618291895 0.05575779000601673 14.269596411926846 0.01803136784479209 0.03665665447518466 1.7909786882909001e-07 6.746909581997272 0.47080110967340205 TS(ph)RDT(ph)SPSSGSAVSSSK ddPTM_A549_PD325901_60min_R1 1 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 T(0.501)S(0.556)RDT(0.54)S(0.383)PS(0.015)S(0.004)GS(0.001)AVSSSK 59.614 0.0022530000000000002 22243000.0 8837.6 7990.4 8030.1 8184.1 9965.6 8230.3 7723.0 9525.2 9587.6 10069.0 8984.8 True False 9734.786646102746 8663.779050311243 8575.07087491404 8689.613269560323 9265.650635453616 8163.275165547264 8016.902991187756 9335.212413625151 9184.666513777112 9433.241621613708 7879.726559339867 1.2354218858729393 1.099502499873176 1.0882447265571644 1.1027810678608503 1.17588479316849 1.0359845743468479 1.0174087807254293 1.1847127363271373 1.1656072637305537 1.1971534228471994 1.0 12.943929851104011 -10.909700854365838 1.1589086528383215 0.9998918006204313 1.1220468920335092 0.0 0.08449465219866059 0.45186514944788003 1.0765902880495504 0.04407552942736991 0.010437635840614364 1.2311164820474468e-11 10.909700854365838 0.1221550914130779 TS(ph)RDTS(ph)PSSGSAVSSSK ddPTM_A549_MK2206_60min_R1 1 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 T(0.426)S(0.518)RDT(0.285)S(0.588)PS(0.135)S(0.041)GS(0.005)AVS(0.001)SSK 62.556000000000004 0.0098839 9032500.0 1335.8 1037.4 1140.4 1011.3 1401.1 1026.3 754.48 921.39 872.16 1497.7 1672.4 True False 1561.2503828255435 1090.1992289063405 1302.1258680662838 1259.0685453989825 1195.000046025947 1134.9023847971964 891.5592498526942 1051.9998541385326 674.6171525533288 1159.3685298021749 1257.0969241081095 1.2419490915016167 0.8672356188285321 1.0358197869190728 1.0015683924230996 0.9506029512193587 0.9027962466795405 0.7092207710914904 0.8368486422675084 0.536646888251643 0.9222586640443247 1.0 10.29588017271752 -7.334492679039617 1.737910866545118 0.7759260068373873 1.0230284570219466 0.35221547817345755 0.13966562795252616 0.366543544147722 2.1632703019598494 0.028377893762338003 0.05197611276938859 4.6292146724115055e-08 7.334492679039617 0.24710245018455923 TS(ph)RDTS(ph)PSSGSAVSSSK ddPTM_A549_PD325901_60min_R1 1 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 2 T(0.442)S(0.556)RDT(0.047)S(0.532)PS(0.338)S(0.07)GS(0.015)AVSSSK 104.88 3.9295e-08 13229000.0 2110.4 2362.0 2441.9 2212.1 3066.7 2723.0 2567.3 2628.2 2620.9 3238.0 2189.9 True False 2324.6462544056326 2561.0540294397206 2607.6220183375767 2348.736392956391 2851.3055715406576 2700.8247908077733 2665.000006380465 2575.778489216985 2510.752687425261 3033.5521273994646 1920.556182919861 1.2104026297587531 1.3334960217337135 1.3577431587412119 1.2229459433910226 1.4846249211026774 1.40627221157449 1.3876188731583008 1.3411627903022216 1.307304993081802 1.5795175139253115 1.0 10.90730845297485 -10.36019972625251 0.671631046955664 0.9902746557753521 1.3481568440428364 0.0 0.18525625943162582 0.299549928606649 0.23965186056704837 0.057140435072346556 0.015881706726826567 4.3631513057174856e-11 10.36019972625251 0.3578821882674843 TS(ph)SKES(ph)SPIPS(ph)PTSDR ddPTM_A549_MK2206_60min_R1 1 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.311)S(0.356)S(0.358)KES(0.556)S(0.421)PIPS(0.905)PT(0.08)S(0.013)DR 72.819 0.00070666 3136300.0 1008.1 1088.3 1240.9 1048.5 1405.1 1169.2 1158.3 1620.8 1443.5 1781.0 1988.5 True False 1178.2426343213292 1143.6898214948615 1416.878279273459 1305.382547068953 1198.4116513247154 1292.9239679478524 1368.7481167219476 1850.5533634918245 1116.5495547958294 1378.6708630417795 1494.7005701919245 0.7882800460630311 0.7651631666588633 0.9479345278442806 0.8733405025070257 0.8017737299523713 0.8650053353373891 0.9157339898158973 1.2380763079887012 0.7470055053584818 0.9223726079563572 1.0 10.545640786365956 -7.618211727279278 4.509694170342392 0.9122027570889224 0.8392838654431845 0.15059274126381472 0.12204130351083017 0.5590244759264956 20.27057077086143 0.021776564050673675 0.032684615881947265 2.4087308377479245e-08 7.618211727279278 -0.07291889164573795 TS(ph)SKES(ph)SPIPSPTSDRK ddPTM_A549_PD325901_60min_R1 2 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.311)S(0.347)S(0.347)KES(0.577)S(0.413)PIPS(0.005)PTSDRK;T(0.311)S(0.386)S(0.386)KES(0.511)S(0.399)PIPS(0.005)PT(0.001)S(0.001)DRK 62.273999999999994 0.0026453 87438000.0 6016.6 7032.9 7563.200000000001 7788.4 8223.1 7219.0 6841.2 7869.1 8579.400000000001 8022.0 8908.2 True False 6627.400802813176 7625.5871649646915 8076.484233216257 8269.471779260228 7645.537824154957 7160.210857451822 7101.545609648286 7712.144627310468 8218.83765366717 7515.489550956917 7812.547873732463 0.8483021045024226 0.9760691759219325 1.033783646993218 1.0584859015154384 0.9786228446498189 0.9165013735821135 0.9089922678778423 0.9871484632101171 1.05200477315483 0.9619767676849287 1.0 12.931577409898228 -8.547307930530256 9.63185942478974 1.0243282997365564 0.9650719859501646 0.07304193709643558 0.05888130309730322 0.4148976530545044 154.9829057645698 0.010086883045938903 0.011473847714746193 2.8359075541680304e-09 8.547307930530256 -0.059256313786391734 TS(ph)SKESSPIPS(ph)PTSDRK ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.249)S(0.267)S(0.279)KES(0.092)S(0.123)PIPS(0.797)PT(0.101)S(0.093)DRK 50.215 0.040469 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TS(ph)SKSEAGAR ddPTM_A549_PD325901_60min_R1 1 TSSKSEAGAR 10 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 T(0.053)S(0.594)S(0.344)KS(0.008)EAGAR 59.79600000000001 0.0023651999999999996 134370000.0 5739.8 6996.3 5512.4 6806.5 5816.3 5578.6 4002.1 5555.9 5762.6 9158.4 9177.2 True False 6322.5002705825655 7585.902754516983 5886.504612754029 7226.922046316925 5407.78315314571 5533.169731178938 4154.402105533152 5445.083215980766 5520.417961981305 8580.137061017676 8048.462579063962 0.7855537884997998 0.942528176033245 0.7313824913675167 0.8979257808958363 0.6719026273679508 0.6874815751236861 0.516173376557627 0.6765370606486724 0.6858972018260077 1.0660591357331686 1.0 12.974497509952547 -10.725948727778961 1.004929225088815 0.998351590019713 0.7317086935197326 0.5039746125887574 0.11271699375861528 0.42054353407025535 0.7616870233201771 0.0783560319328003 0.020764048074022073 1.879538699510385e-11 10.725948727778961 -0.2666428964999804 TS(ph)SLDGAAVAVLSR ddPTM_A549_PD325901_60min_R1 1 TSSLDGAAVAVLSR 14 0 D6R9V6;A6NJ38;A6NHM7;Q7Z5H3-4;Q7Z5H3-3;Q7Z5H3;Q7Z5H3-5;Q7Z5H3-2 D6R9V6 ARHGAP22 Rho GTPase-activating protein 22 1 T(0.027)S(0.597)S(0.377)LDGAAVAVLSR 144.55 4.8163e-13 11108000.0 2098.4 2338.7 2162.8 2172.1 2527.4 1863.9 2420.3 2449.1 2968.0 2300.7 2282.2 True False 2311.428023239565 2535.7904566683633 2309.580613972936 2306.265683802983 2349.884143056661 1848.7210163740763 2512.405840938979 2400.2507792182164 2843.2652814980233 2155.433409360081 2001.503868057769 1.1548456438820385 1.2669425711023274 1.153922633291796 1.1522664135747838 1.1740592564215002 0.9236659723111347 1.2552590484758752 1.1992236525365227 1.4205644699838065 1.0769069417046309 1.0 10.966868688507633 TS(ph)SLTQFPPSQSEER ddPTM_A549_MK2206_60min_R1 2 TSSLTQFPPSQSEER 15 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 T(0.006)S(0.698)S(0.293)LT(0.003)QFPPSQSEER;T(0.014)S(0.491)S(0.491)LT(0.005)QFPPSQSEER 187.37 1.9037999999999997e-33 16002200.0 13597.800000000001 15265.2 13629.3 13352.5 20497.8 17249.4 16706.9 16936.6 25409.4 23578.3 23305.4 True False 15892.776205708324 16042.133477059066 15562.13968224817 16623.863099416492 17482.60077327146 19074.72005877498 19742.32747238358 19337.414916162168 19654.21147047394 18251.945654159474 17518.025983681608 0.9072241484578664 0.9157500675020481 0.8883500741889876 0.9489575546298398 0.9979777852571319 1.0888624138669198 1.1269721537560198 1.1038581021728908 1.121942134849111 1.041895112563569 1.0 14.096552593757659 -6.859916570759635 2.1011431141540617 1.0702815727544823 0.9069668097910969 0.8195307140890045 0.036315096205231545 0.14303165302182808 1.2827202724994973 0.0077758119739820926 0.016911106709437893 1.3806494659301523e-07 6.859916570759635 -0.16331476296338543 TS(ph)SPAQGAEASVSALRPDLGFVR ddPTM_A549_MK2206_60min_R1 1 TSSPAQGAEASVSALRPDLGFVR 23 1 H3BN27;A0A087WYE0;Q9Y342 H3BN27 PLLP Plasmolipin 1 T(0.014)S(0.52)S(0.465)PAQGAEASVSALRPDLGFVR 80.359 1.7195e-05 2379100.0 612.47 917.0 936.63 773.78 1275.9 726.16 691.07 978.03 1060.1 729.62 1360.9 True False 715.8399625461607 963.6713831763193 1069.4582179997578 963.3561347363036 1088.2168001745092 803.0017692140035 816.6284736450283 1116.6687475912574 819.9890426318384 564.7983352569025 1022.9509710707524 0.6997793469973153 0.9420504114362553 1.0454638083781522 0.9417422359235172 1.0638015222131723 0.784985587699749 0.7983065628162409 1.0916151205393627 0.8015917339357252 0.5521264960193661 1.0 9.998521284595617 -3.72059231990139 17.089456433741443 0.9147036801156009 0.29327504196229803 0.0 0.16520084002423102 0.0 0.0 0.016214632478818013 0.0 0.00019028636944173208 3.72059231990139 -0.6214286381533028 TS(ph)SPGGKKPPPTPQR ddPTM_A549_PD325901_60min_R1 1 TSSPGGKKPPPTPQR 15 2 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 T(0.112)S(0.486)S(0.402)PGGKKPPPTPQR 80.316 8.236200000000001e-05 21115000.0 2807.4 2589.1 3114.9 2867.7 3211.8 5083.2 4072.5 4125.5 3924.1 4241.2 4517.0 True False 3092.4051813013525 2807.292543447241 3326.2958454153413 3044.8313159807612 2986.2142481084866 5041.804104529591 4227.4812160575075 4043.2136661078575 3759.183723425338 3973.4099081922814 3961.4376356221815 0.7806270010396519 0.7086549888362256 0.8396688655412633 0.7686177585129499 0.7538208405089465 1.2727208070101874 1.0671583412150678 1.0206430185219444 0.9489443149683517 1.0030222039752545 1.0 11.95180837491379 TS(ph)SPHKEES(ph)PKK ddPTM_A549_MK2206_60min_R1 1 TSSPHKEESPKK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.324)S(0.352)S(0.351)PHKEES(0.973)PKK 42.277 0.026909 24607000.0 5149.5 4603.1 3462.8 2232.1 2013.8 1865.0 2245.1 2305.0 2034.3 7254.8 7783.5 True False 6018.609706812499 4837.378128570251 3953.8771097333643 2778.964600202776 1717.5726876647295 2062.3530621131945 2653.0056089548852 2631.740808766446 1573.5342981095646 5615.935641322574 5850.642136328313 1.0287092538853517 0.8268114876713419 0.6758022483006794 0.4749845462171389 0.29356994457067004 0.35250029211451056 0.453455457902922 0.4498208482835095 0.2689507000161639 0.9598836350717164 1.0 12.51437926082065 -5.62673184249757 1.98946270148374 0.562629987198718 1.0276607424586752 0.30847445068759993 0.2314084344771007 0.5191110403062842 3.4642912786271025 0.04200368508518362 0.33554252741274065 2.3619361734322405e-06 5.62673184249757 0.4650307552599572 TS(ph)SPHKEES(ph)PKK ddPTM_A549_PD325901_60min_R1 2 TSSPHKEESPKK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.277)S(0.363)S(0.362)PHKEES(0.998)PKK;T(0.308)S(0.347)S(0.347)PHKEES(0.998)PKK 50.608000000000004 0.0090811 138522000.0 10420.5 9977.2 7597.0 8701.1 10390.7 6894.5 5630.9 6729.9 8125.200000000001 10345.0 12247.5 True False 11478.381488833349 10818.013658986443 8112.578104472167 9238.547185368136 9660.893077969005 6838.353477864193 5845.186980846712 6595.666864995581 7783.726100144123 9691.814934511258 10741.13514329924 1.068637656606903 1.0071573920876662 0.7552812618257695 0.8601090166090611 0.8994294317203397 0.6366509113452723 0.5441870810547598 0.6140567804986821 0.7246651304820357 0.9023082574803474 1.0 13.390858847646488 -5.667164271882355 5.083029013773461 0.80891355448532 1.0522640150987381 0.338494775283784 0.13638639415539522 0.2316580892801868 9.59097743107901 0.02336032198176393 0.09556767070366641 2.151967599043215e-06 5.667164271882355 0.24335046061341814 TS(ph)SPPR ddPTM_A549_PD325901_60min_R1 1 TSSPPR 6 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.103)S(0.558)S(0.34)PPR 72.138 0.048593 180150000.0 3455.3 2768.5 2170.9 1803.7 2323.6 1795.9 1261.3 1805.2 2086.0 2899.5 4587.3 True False 3806.0795123425805 3001.8112110515935 2318.230328682193 1915.1104525000862 2160.3983519848284 1781.2747858287464 1309.2994617098432 1769.1938698479964 1998.3326742604045 2716.425075168233 4023.0911812905983 0.9460584761396332 0.7461454577543578 0.5762311178685515 0.47602959172447173 0.5369995992215562 0.44276271791019106 0.32544613152163826 0.43975982400688296 0.49671573032042093 0.6752084287328557 1.0 11.974088720936601 -10.653999046648153 0.9360729320437425 0.9984546442829298 0.5447117629584571 0.1946299347333461 0.18407233544284463 0.3828176643048489 0.6003696037858249 0.11499765413965936 0.031153752552859574 2.218201289132121e-11 10.653999046648153 -0.4537428813244727 TS(ph)SSETEEKKPEKPLILQSLGPK ddPTM_A549_MK2206_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 T(0.072)S(0.494)S(0.424)S(0.008)ET(0.002)EEKKPEKPLILQSLGPK 141.78 1.565e-27 29664000.0 2293.1 2810.6 3026.9 3172.2 4344.2 3763.9 3537.7 3215.7 4505.4 5179.9 5353.9 True False 2680.1192190876295 2953.6475349567777 3456.159935154188 3949.389142405467 3705.173934726943 4162.193399725388 4180.454297269478 3671.5353226682255 3484.9340936453964 4009.7569924032105 4024.378869877068 0.665970900291875 0.7339387345125888 0.8588058050458263 0.9813661362669136 0.9206821858798111 1.0342449193538603 1.03878248853771 0.9123234768351667 0.8659557676665393 0.9963666747225755 1.0 11.974550416834058 -5.804235858563263 2.0752362996453746 0.9493273073581499 0.671192926400444 0.7900445061073181 0.053131745883664296 0.14352008376180792 1.1602106002031505 0.009148044788254928 0.049746936271112284 1.569510196313627e-06 5.804235858563263 -0.2781343809577058 TS(ph)SSETEEKKPEKPLILQSLGPK ddPTM_A549_PD325901_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 T(0.076)S(0.517)S(0.383)S(0.007)ET(0.017)EEKKPEKPLILQSLGPK 151.99 2.5732e-28 65663000.0 5569.9 5604.4 8266.4 5977.2 8206.0 7244.5 8690.6 7628.4 8888.0 8095.2 9791.8 True False 6135.352147656335 6076.702456643511 8827.40761390137 6346.398068793883 7629.638869163158 7185.5031939063165 9021.325538678791 7476.245577635972 8514.468268852575 7584.067690464524 8587.470675334354 0.7144539270775971 0.7076242454134394 1.0279403502659035 0.7390299552372893 0.8884617086469524 0.8367426761112693 1.0505218451098286 0.8705992556236454 0.9914989629377761 0.8831550030497469 1.0 13.068017552057519 -3.2160275836490615 0.2230919964154075 1.01678254259084 1.198663498326291e-15 0.33160717380986915 0.09759301105487751 15.73675534333704 0.294386232447012 0.05361558612290141 5.233243859659986 0.0006080963776017898 3.2160275836490615 -1.016782542590839 TS(ph)STLDSEGTFNSYR ddPTM_A549_MK2206_60min_R1 2 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.374)S(0.606)S(0.006)T(0.014)LDSEGTFNSYR;T(0.021)S(0.487)S(0.487)T(0.004)LDSEGTFNSYR 216.54 9.702399999999999e-46 13841700.0 3609.0 4230.6 3411.8 3570.0 4749.6 2923.8999999999996 3330.4 4329.3 4954.7 4265.7 4836.9 True False 4218.11096842146 4445.919469646388 3895.6445428521133 4444.650160263391 4050.940131757074 3233.305157272259 3935.4905706041404 4942.991532925197 3832.468361030062 3302.075407342684 3635.7642383511807 1.1601717525926196 1.2228294185715993 1.0714788659175514 1.2224803009446619 1.1141921934944208 0.8893055064369528 1.0824383300466385 1.359546771703449 1.054102551701231 0.9082204430395562 1.0 11.828042935462175 -14.999999873210857 0.05048962448176925 0.4185545934806986 1.4037410001773594 0.2345896882349643 0.11667966272310298 467.3057552012437 1.7995044665242752 35.930585567526876 8.317301371417999 1.0000002919428327e-15 14.999999873210857 0.9851864066966607 TS(ph)STLDSEGTFNSYR ddPTM_A549_PD325901_60min_R1 1 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.075)S(0.644)S(0.253)T(0.027)LDSEGTFNSYR 180.49 1.2741e-28 9660600.0 3242.4 3566.9 3543.0 3553.7 3656.9 3875.7 4202.2 3835.2 4687.0 5159.5 5721.0 True False 3571.566061071276 3867.4951810366383 3783.4492857897685 3773.203977961723 3400.051959620123 3844.1375841842373 4362.117020532072 3758.7039273438045 4490.021689481552 4833.728289474225 5017.3532684070215 0.7118426528904205 0.7708237738389396 0.7540727318550943 0.7520307572760752 0.6776584740463408 0.766168411618488 0.8694059969823527 0.7491407772722309 0.8948984552780168 0.9634020231166428 1.0 12.292710805510188 -8.988936548302247 0.5419020359526546 0.9928157812790961 0.7325542160430734 0.8079172503348434 0.04405896548696411 0.19753937433976454 0.13432429819197733 0.01724857751158243 0.01410466110759812 1.0258017879538015e-09 8.988936548302247 -0.26026156523602273 TS(ph)TESFAPR ddPTM_A549_MK2206_60min_R1 1 TSTESFAPR 9 0 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 T(0.175)S(0.645)T(0.175)ES(0.006)FAPR 44.425 0.057504999999999994 4494100.0 1204.1 1528.2 1434.5 1086.4 1243.2 1305.9 902.29 1339.8 1612.4 1780.3 1783.3 True False 1407.322642581403 1605.9788525300457 1637.93367041484 1352.5680487703487 1060.3269268570814 1444.0894712137372 1066.2244135690632 1529.7207529654163 1247.1939744737067 1378.1289935279515 1340.4573934238176 1.0498824128880344 1.1980827293794314 1.221921471320475 1.0090347186012365 0.7910187463316365 1.0773109822798774 0.795418354063232 1.1411931184609898 0.930424182515868 1.0281035415888247 1.0 10.38850964850099 -6.393725784006786 5.4647393463029506 0.9628523059422546 1.1591888189174453 0.3739528096954675 0.10742975290254106 0.1559309070704479 6.290242413353416 0.013417812854122529 0.03163749578745354 4.0390033743086397e-07 6.393725784006786 0.19633651297519072 TS(ph)TSDLSR ddPTM_A549_PD325901_60min_R1 1 TSTSDLSR 8 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.028)S(0.913)T(0.046)S(0.013)DLSR 96.665 0.0024792 8002900.0 1661.7 1514.4 1644.6 1594.4 1728.6 1348.5 1511.5 1695.0 1607.1 1558.3 1899.4 True False 1830.3945607211149 1642.0238027872633 1756.2124457831933 1692.8824668548755 1607.1890993462628 1337.5182630937502 1569.020959624537 1661.1918952982228 1539.559175840793 1459.9086720588575 1665.785841288637 1.0988174562134219 0.9857352380405686 1.0542846518761397 1.0162665721454787 0.9648233641504335 0.802935305332562 0.9419103709098383 0.9972421749083542 0.9242239534523861 0.8764083808813534 1.0 10.701987219836855 -6.704936987824635 3.765350592913235 0.9517203929248859 1.0389930968725243 0.40794061738730625 0.060187795468189594 0.21750340316627373 6.259452063278918 0.008649177326596494 0.018395780293361034 1.9727089374583821e-07 6.704936987824635 0.08727270394763842 TS(ph)TSSSSVQAR ddPTM_A549_PD325901_60min_R1 1 TSTSSSSVQAR 11 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.134)S(0.863)T(0.002)SSSSVQAR 70.488 0.0030127 4470000.0 354.58 442.82 639.23 516.8 668.19 441.11 517.92 330.55 490.19 713.55 444.07 True False 390.576700572 480.137995476925 682.6119918022563 548.7215622620419 621.2586395303595 437.5177464095542 537.6297290166988 323.9569209385416 469.5890189816429 668.4963312247949 389.45220519166315 1.002887377103908 1.232854735642419 1.7527490734487403 1.4089573892436855 1.5952115079811044 1.1234183311254748 1.3804767872661352 0.8318271577872077 1.2057680319220212 1.7165041622907342 1.0 8.605302476819357 -7.798315421454329 1.7366658257818255 1.0833555408920745 1.3986180383341218 0.0 0.2901514177659158 0.33453987845369176 2.0631568316573365 0.036037890975571196 0.054949757709271914 1.5910527499868752e-08 7.798315421454329 0.31526249744204726 TS(ph)VHVPLEAR ddPTM_A549_MK2206_60min_R1 1 TSVHVPLEAR 10 0 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 T(0.258)S(0.742)VHVPLEAR 60.305 0.0080743 2113800.0 912.44 819.25 967.51 743.12 1085.4 875.52 897.09 919.12 1209.2 1262.9 1293.5 True False 1066.4375649837848 860.9463257003274 1104.7174663388375 925.1844333599247 925.7390978206856 968.1669452768601 1060.0796408789543 1049.4080746869483 935.318130695613 977.6100128778576 972.2882512161199 1.0968327177150445 0.8854846539834992 1.136203656638942 0.951553649036406 0.9521241223091903 0.9957612303407916 1.0902935827446507 1.0793178600835385 0.9619761727303963 1.0054734402632979 1.0 9.925240278245486 TS(ph)VHVPLEAR ddPTM_A549_PD325901_60min_R1 1 TSVHVPLEAR 10 0 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 T(0.246)S(0.754)VHVPLEAR 57.885 0.012297 3898400.0 1461.5 1639.0 1691.0 1928.5 2040.8 1779.5 1780.9 2163.7 2363.8 2710.6 2228.5 True False 1609.8704041005656 1777.124282071 1805.7614288090606 2047.6190650587225 1897.4612483777923 1765.0083419913444 1848.673124045874 2120.543306110186 2264.4577063359275 2539.4522534061093 1954.408627625422 0.8237122888965828 0.9092900312408977 0.9239426204350287 1.0476923996935839 0.9708620917638806 0.9030907441990798 0.9458989782970744 1.0850050885656473 1.1586408667706356 1.2993456012786369 1.0 10.932516422088929 -8.243078146651548 6.690683252259409 1.0778284087708887 0.935405378022719 0.5058683417705994 0.0904487364764161 0.12247105955868566 25.383447307540695 0.012347538826376753 0.015703810997825886 5.71375814448649e-09 8.243078146651548 -0.14242303074816975 TS(ph)VQTEDDQLIAGQSAR ddPTM_A549_MK2206_60min_R1 1 TSVQTEDDQLIAGQSAR 17 0 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 T(0.129)S(0.871)VQTEDDQLIAGQSAR 149.09 1.4144e-16 3759100.0 1112.1 831.77 824.92 845.05 1630.0 1031.8 934.89 1236.1 1153.0 1241.7 1393.3 True False 1299.7952917654497 874.1035402230837 941.9060602290771 1052.087287935736 1390.2291592479442 1140.984391146592 1104.7474115878283 1411.320960397486 891.8473409626536 961.1991076018976 1047.305156876243 1.2410855453460188 0.8346216329443453 0.8993616178100986 1.0045661295832404 1.3274346546660072 1.0894478879009462 1.0548476767582393 1.3475737717237821 0.8515639736012878 0.9177832280219352 1.0 10.03246615115955 TS(ph)VQTEDDQLIAGQSAR ddPTM_A549_PD325901_60min_R1 2 TSVQTEDDQLIAGQSAR 17 0 G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 T(0.116)S(0.884)VQTEDDQLIAGQSAR;T(0.379)S(0.621)VQTEDDQLIAGQSAR 247.61 3.1808999999999996e-75 10750500.0 3411.4 3512.4 3764.6000000000004 3745.9 3984.7000000000003 3132.7 3472.8 3299.3 3406.2 3586.8 4258.200000000001 True False 3757.722816660055 3808.4022747688705 4020.0883943788217 3977.2757354438504 3704.828418468734 3107.1883298433745 3604.9593043890795 3233.4928732492226 3263.0492593795734 3360.328835872883 3734.4683949538144 1.0062269697442514 1.0197976986269208 1.0764821038011596 1.0650179128087223 0.9920631336644511 0.8320296227548613 0.965320608753917 0.8658509140466866 0.8737653969139907 0.8998145065074091 1.0 11.866687173312785 -7.007379957406589 16.3328698554388 0.9274527347566244 1.0409979840225085 0.613301546739271 0.04930258485684981 2.664493197175574 5900.409947509473 0.008747197568967227 0.01595642952886834 9.831505864149642e-08 7.007379957406589 0.11354524926588416 TSAAACAVTDLS(ph)DDS(ph)DFDEKAK ddPTM_A549_PD325901_60min_R1 2 TSAAACAVTDLSDDSDFDEKAK 22 1 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 2 TSAAACAVT(0.002)DLS(0.998)DDS(1)DFDEKAK;TSAAACAVT(0.088)DLS(0.912)DDS(1)DFDEKAK 183.49 7.027799999999998e-50 94394000.0 16222.300000000001 16958.2 17179.3 16140.8 16885.9 16592.1 19851.5 21102.0 14309.1 16791.1 18183.7 True False 17869.175953773924 18387.327028808075 18345.190605523047 17137.78055758353 15699.892637192552 16456.97943869323 20606.959695657606 20681.104055801236 13707.738288235638 15730.907080412951 15947.220175971463 1.1205197994756713 1.1530114230512258 1.150369180527446 1.0746562954843972 0.9844908682485257 1.0319653994299176 1.2921976036116454 1.2968469631442459 0.8595691372525117 0.9864356863972793 1.0 13.9610173434858 -8.778194405742022 24.99998703656231 0.9336854208860447 1.1332954671822744 0.4328603418568455 0.09599484911258568 168.6240621944599 251601.15457120398 0.018712636599757835 0.019946632480692828 1.666501060086731e-09 8.778194405742022 0.1996100462962297 TSAAACAVTDLS(ph)DDSDFDEKAK ddPTM_A549_PD325901_60min_R1 2 TSAAACAVTDLSDDSDFDEKAK 22 1 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 1 TSAAACAVTDLS(1)DDSDFDEKAK;TSAAACAVT(0.002)DLS(0.998)DDSDFDEKAK 224.99 7.347699999999997e-88 15854100.0 5467.700000000001 6614.1 6017.8 6817.0 5952.0 7545.0 6888.299999999999 8512.8 6108.6 7022.7 7403.1 True False 6022.776878892002 7171.49341918597 6426.204095971116 7238.070607469702 5533.95205328529 7483.55602153678 7150.438025922391 8343.00552583759 5851.876785228717 6579.285523498517 6492.565632117464 0.9276420478675629 1.1045700306378086 0.9897788424628208 1.1148244034167893 0.8523521157660543 1.1526346356080066 1.1013270301882756 1.2850090393489992 0.901319619516916 1.0133567985746754 1.0 12.664572977570668 TSALS(ph)PNAK ddPTM_A549_PD325901_60min_R1 2 TSALSPNAK 9 0 P50616 P50616 TOB1 Protein Tob1 1 TSALS(1)PNAK;T(0.007)S(0.001)ALS(0.992)PNAK 97.81299999999999 0.00085223 30993000.0 15168.2 13607.3 12621.5 14465.8 16468.2 15907.6 12333.7 13603.6 19978.6 14429.900000000001 19853.3 True False 16708.06449776133 14754.034925823506 13478.070889245144 15359.319611784531 15311.530444205784 15778.053779747968 12803.06570275961 13332.265526182246 19138.968919452982 13518.793651377862 17411.469960437873 0.9596010294205595 0.8473744582937248 0.7740914994466206 0.8821380185983025 0.8793933239982871 0.9061873475127986 0.7353236534221739 0.7657174010279233 1.0992161467664885 0.7764303463231478 1.0 14.08775038696761 -8.765604378127845 24.99999017964544 1.0468520766609548 0.8424662797741815 0.04246306559237423 0.10481698015323111 48.28361651703502 289816.8068302484 0.012323715377979397 0.013351022941373355 1.7155193534701384e-09 8.765604378127845 -0.20438579688677327 TSAPS(ph)PTALK ddPTM_A549_PD325901_60min_R1 1 TSAPSPTALK 10 0 Q52LR7 Q52LR7 EPC2 Enhancer of polycomb homolog 2 1 T(0.002)S(0.01)APS(0.948)PT(0.04)ALK 60.598 0.0079311 2828800.0 3681.0 3462.4 2316.9 3329.8 3914.8 3842.6 3387.7 3623.1 3524.3 4064.7 6290.0 True False 4054.6924101910236 3754.188599293855 2474.1387666515147 3535.474183475519 3639.837953326824 3811.3071396099676 3516.6207773205697 3550.8344282330336 3376.1859270833847 3808.0541483139596 5516.369875595203 0.7350291045800355 0.6805541839938329 0.4485084978796062 0.6409059332871602 0.659824855006499 0.6909085550030738 0.6374882135584019 0.6436904174867185 0.6120303756316019 0.690318857181976 1.0 12.429503478242927 -10.72431183503829 0.7039322148504799 1.034717512034801 0.6323947069340079 0.15746191174890878 0.11369700100019538 0.3107293024499933 0.23571793599698698 0.07467833593131037 0.013962461302376883 1.8866362074503594e-11 10.72431183503829 -0.402322805100793 TSAQTT(ph)PSKIPR ddPTM_A549_MK2206_60min_R1 2 TSAQTTPSKIPR 12 1 O95684 O95684 FGFR1OP FGFR1 oncogene partner 1 T(0.001)S(0.001)AQT(0.039)T(0.95)PS(0.009)KIPR;T(0.005)S(0.005)AQT(0.154)T(0.8)PS(0.036)KIPR 54.09 0.0084479 25849000.0 5272.1 6134.0 5350.1 4662.0 8092.6 5501.700000000001 4682.1 4711.7 8035.1 8145.5 8516.8 True False 6161.901589530286 6446.194399567659 6108.824628850779 5804.190209285135 6902.189260202397 6083.886242267109 5532.776963915936 5379.597903976078 6215.162679418059 6305.425892704562 6401.843508277892 0.9625198712781171 1.0069278312149335 0.9542289843467392 0.9066435631830171 1.0781565108983895 0.9503334835349148 0.864247455715184 0.8403201198248595 0.9708395201134726 0.984939085835407 1.0 12.644271695598869 -9.135113585678711 4.090417901987023 0.9885340145181825 0.9463679839402105 0.07754636963816075 0.06130917461019216 0.40064106975631203 13.829231157586834 0.012043218873509131 0.011740877935835475 7.326328947661428e-10 9.135113585678711 -0.04216603057797197 TSAQTT(ph)PSKIPR ddPTM_A549_PD325901_60min_R1 2 TSAQTTPSKIPR 12 1 O95684 O95684 FGFR1OP FGFR1 oncogene partner 1 T(0.001)S(0.001)AQT(0.055)T(0.941)PS(0.002)KIPR;TSAQT(0.005)T(0.988)PS(0.007)KIPR 74.789 0.00051326 49529000.0 8306.4 9044.099999999999 8925.400000000001 8743.1 10328.900000000001 10058.0 9322.2 9245.5 10183.900000000001 9623.099999999999 10686.2 True False 9149.659613151514 9806.27804727171 9531.131316790295 9283.141429979221 9603.433696770575 9976.09098271927 9676.961422303582 9061.091249545556 9755.906098466226 9015.495823711477 9371.865145403086 0.9762901483531734 1.0463528758820972 1.0169940741694656 0.9905329713939189 1.0247089077547251 1.0644723145224255 1.03255448858546 0.9668396961505613 1.0409780707580405 0.961974557234596 1.0 13.194120479638002 -5.234039393065002 22.66545240401769 1.0197042754707657 0.9762899322752091 0.0901678522471393 0.031233762803723766 3493.7695034884014 2889908.689444712 0.003633015419216133 0.37514149424400156 5.83392184769747e-06 5.234039393065002 -0.04341434319555659 TSASAS(ph)LEAT(ph)AMGTEK ddPTM_A549_MK2206_60min_R1 1 TSASASLEATAMGTEK 16 0 E5RH60;Q8TAG6 E5RH60 C8orf46 Uncharacterized protein C8orf46 2 T(0.194)S(0.214)AS(0.264)AS(0.329)LEAT(0.603)AMGT(0.395)EK 56.147 0.033576 3402800.0 1181.9 1341.4 856.32 1488.5 1312.3 1889.3 1027.1 1775.3 1123.1 761.88 570.91 True False 1381.3758253192927 1409.6715304173563 977.7590523873375 1853.1825668213044 1119.2624083932976 2089.2244719841588 1213.710775002256 2026.9542116282312 868.7196432221654 589.77077885136 429.137290685578 3.2189601213924908 3.2848963746900286 2.2784294760897996 4.318390890385476 2.60816860405022 4.868429095608239 2.828257532835855 4.723323410999833 2.0243396742201605 1.3743172445096958 1.0 8.745295461985705 -8.95834425422514 4.838161415463326 1.4337747175502822 3.4886431427935696 0.5676784350606452 0.8078735693313105 0.0997269439512013 4.857586794386642 0.1394351629918664 0.14472955711735833 1.1006664932334382e-09 8.95834425422514 2.0548684252432876 TSASEGNPYVSSTLSVPAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TSASEGNPYVSSTLSVPASPR 21 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR 322.4 2.303699999999999e-184 92136000.0 2681.8 3368.9 3565.8 3083.4 4141.5 3111.2 3347.8999999999996 3407.0 4900.6 4918.299999999999 5147.6 True False 3134.4222762850322 3540.362620264673 4071.484058532756 3838.833138419084 3532.290836211878 3440.4251189525844 3956.1700940804717 3889.952683499906 3790.621924650114 3807.252614092299 3869.3088534674125 0.8100729083635119 0.9149857905739521 1.0522509866029868 0.9921237316010537 0.9128996857013567 0.8891575341341668 1.0224487741616233 1.0053352758371805 0.9796638284000554 0.9839619317751017 1.0 11.917860175909453 -7.772503664080246 24.9994502397365 0.9936962795779622 0.9357605465247658 0.2577375776952888 0.05796852601061184 284.26730247212066 642293.0749555819 0.009295354079629614 0.012907350276596358 1.6884816139494874e-08 7.772503664080246 -0.057935733053196437 TSASEGNPYVSSTLSVPAS(ph)PR ddPTM_A549_PD325901_60min_R1 4 TSASEGNPYVSSTLSVPASPR 21 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR 342.14 7.206999999999998e-209 196426500.0 9713.0 10095.4 10952.500000000002 11161.7 12176.9 10818.4 11018.5 10691.699999999999 10701.300000000001 11402.9 12334.599999999999 True False 10699.056609667325 10946.174787809381 11695.80251273284 11851.132858940075 11321.636552024473 10730.298537229084 11437.815047054553 10478.445656023612 10251.561575773188 10682.91894796891 10817.522395471635 0.9890487136080346 1.01189296288322 1.0811905060283364 1.095549648586919 1.0466016281846449 0.9919367989218064 1.0573414714484513 0.9686548613396017 0.9476811048770867 0.9875569060472599 1.0 13.40108248711789 -8.267623506848343 24.844119576398704 0.9741056105004395 1.0403021824426564 0.4490682203692641 0.03358407741292902 337.68467823469007 1356611.0692542803 0.0061404040185286815 0.007526039854123106 5.399785311175998e-09 8.267623506848343 0.06619657194221684 TSAVS(ph)SPLLDQQR ddPTM_A549_MK2206_60min_R1 1 TSAVSSPLLDQQR 13 0 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 TSAVS(0.5)S(0.5)PLLDQQR 281.32 2.0631999999999996e-98 65038000.0 2417.7 2863.4 2895.6 2502.8 3348.0 2695.3 2896.9 2528.9 4400.7 4311.7 4502.0 True False 2825.748652910105 3009.1348294297422 3306.2396208108835 3115.9861123549613 2855.513635068781 2980.51485700466 3423.229231919027 2887.379319431438 3403.9484764738527 3337.6839753942986 3384.0291511209693 0.8350249145974608 0.8892165803101778 0.9770127481660973 0.9207917465258187 0.8438206373378562 0.880759214505394 1.0115838484385018 0.8532371296136694 1.0058862747521797 0.9863047350785029 1.0 11.724526281014901 -8.780746757281447 24.799694096981757 1.0027796484302571 0.9052508433682878 0.404722196941662 0.051570358328169995 145.20097410847958 186505.13481095026 0.00866930138959944 0.009236178719135945 1.6567357458617055e-09 8.780746757281447 -0.09752880506196937 TSAVS(ph)SPLLDQQR ddPTM_A549_PD325901_60min_R1 1 TSAVSSPLLDQQR 13 0 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 TSAVS(0.5)S(0.5)PLLDQQR 250.16 1.2642999999999998e-68 100200000.0 6182.0 6275.2 5597.3 5365.4 6716.7 5902.3 6089.3 6776.3 7003.7 6254.8 7306.5 True False 6809.592089052132 6804.033126816314 5977.166437299205 5696.808572292489 6244.942163357077 5854.233625701326 6321.031643692813 6641.141380595486 6709.358845022817 5859.8708605491565 6407.846819719611 1.06269582913502 1.0618283049272452 0.9327885958361204 0.8890363225851527 0.9745773173195701 0.913603865761181 0.9864517398013275 1.0364076369862543 1.047053563199315 0.9144836050880455 1.0 12.64562394503788 -8.105508642986344 5.203614843304323 1.023736905376357 0.9694777845444529 0.0 0.06136865676226763 0.31326888267489056 12.734831616127401 0.009001895708846441 0.011716242096536433 7.843165098778866e-09 8.105508642986344 -0.054259120831904095 TSAVSS(ph)PLLDQQR ddPTM_A549_MK2206_60min_R1 1 TSAVSSPLLDQQR 13 0 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 TSAVS(0.016)S(0.984)PLLDQQR 206.32 3.0882e-31 69759000.0 2408.4 2900.1 2852.5 2942.2 3627.5 2555.5 2481.7 3150.6 3779.4 3549.8 4170.3 True False 2814.8790402732757 3047.7027026713663 3257.0273927210415 3663.0391320803787 3093.899555320191 2825.9213137963907 2932.5927663548787 3597.2071983078395 2923.3719344616275 2747.897714556829 3134.699415575249 0.8979741490642148 0.9722471913984397 1.0390238300163603 1.1685455753365028 0.9869844425745138 0.9014967431184484 0.9355259875265324 1.147544539816018 0.932584451299028 0.8766064461885773 1.0 11.614111395169596 -6.981016071545716 24.998402383437295 0.9742354528107783 1.0250108002495566 0.06729598312696095 0.08968446141306893 556.2309328800674 732452.1109383894 0.012428160493248623 0.023485021634331908 1.0446815589135748e-07 6.981016071545716 0.05077534743877832 TSAVSS(ph)PLLDQQR ddPTM_A549_PD325901_60min_R1 1 TSAVSSPLLDQQR 13 0 Q5T200;Q5T200-2;A0A087WX14 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 TSAVS(0.015)S(0.985)PLLDQQR 249.69 1.3158999999999998e-68 100040000.0 3608.7 4524.2 4582.3 4932.4 4793.5 5077.9 5092.7 4713.7 4776.6 4859.4 5323.4 True False 3975.052567415471 4905.470211681281 4893.282433608369 5237.063145706844 4456.821096677259 5036.547265972376 5286.505485332369 4619.681555673888 4575.856113073945 4552.576654689607 4668.655547812956 0.8514341070370024 1.0507243812363203 1.0481138270953916 1.1217497397425604 0.9546262411166893 1.0788003557751782 1.1323400133489923 0.9895100438150745 0.9801228782486464 0.9751365479987645 1.0 12.188791435505275 -8.423895844247745 19.915816035346253 0.990244136135153 1.0389012542240101 0.0848869886249578 0.07390712411873317 15.299153334889873 3070.125198082411 0.011530295545038588 0.013939425265047524 3.76794153742008e-09 8.423895844247745 0.04865711808885709 TSCSGSGERES(ph)PER ddPTM_A549_MK2206_60min_R1 3 TSCSGSGERESPER 14 1 Q9H8Y5;C9JQZ3;C9K022 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 TSCSGSGERES(1)PER;T(0.001)S(0.001)CS(0.001)GS(0.004)GERES(0.994)PER;TSCSGSGERES(1)PER 94.544 1.4887999999999999e-05 39086200.0 1281.98 1827.14 1600.81 1067.9099999999999 1747.62 1371.65 1499.79 1391.44 2257.9500000000003 2036.6399999999999 2134.11 True False 1498.3468825982127 1920.1336216540678 1827.8289291995675 1329.5479979403021 1490.5474130582159 1516.797092572419 1772.2824294037894 1588.6808811062836 1746.5279302052245 1576.56160949209 1604.1515885603678 0.9340431997096306 1.1969776642974717 1.1394365359447962 0.8288169319044802 0.9291811470235771 0.9455447374107927 1.1048098209934818 0.9903558319772209 1.0887549173408426 0.9828008903491232 1.0 10.647594764192352 -7.7555413388844725 24.984752506790592 1.042578210639494 1.0007460556625298 0.028045208070543115 0.10181890851042691 469.16906538984 1987441.1077845823 0.016240796058275418 0.02373333293817702 1.7557337644457134e-08 7.7555413388844725 -0.04183215497696424 TSCSGSGERES(ph)PER ddPTM_A549_PD325901_60min_R1 4 TSCSGSGERESPER 14 1 Q9H8Y5;C9JQZ3;C9K022 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 T(0.001)S(0.001)CS(0.005)GS(0.023)GERES(0.971)PER;T(0.003)S(0.003)CS(0.001)GS(0.001)GERES(0.991)PER;TSCSGS(0.001)GERES(0.999)PER;TSCSGSGERES(1)PER 72.433 0.00039683 52832100.0 1444.72 1246.75 1528.95 1650.78 1499.5400000000002 1449.63 1147.07 1263.44 1034.77 1269.6499999999999 1436.2800000000002 True False 1591.3869108533484 1351.8179979695049 1632.713741323249 1752.744931406604 1394.2174835321614 1437.8246939032952 1190.7223765507888 1238.2396980504936 991.2822154096062 1189.4840823201748 1259.626665329074 1.2633798209071756 1.0731894101466533 1.2961886138673533 1.3914796976362074 1.1068497689892314 1.1414689236732436 0.9452978484221877 0.9830211856677445 0.7869650926694509 0.9443147839438801 1.0 10.298780488317297 -7.631858386506648 1.4934525671891843 0.9019861051045078 1.2374884227569478 0.6913680679009964 0.09474148146330946 0.17601564153906932 0.7945286596521236 0.018039869515834816 0.030065625640416194 2.334219073630146e-08 7.631858386506648 0.33550231765244 TSCSGSGERES(ph)PERK ddPTM_A549_MK2206_60min_R1 2 TSCSGSGERESPERK 15 2 Q9H8Y5;C9JQZ3;C9K022 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 T(0.001)S(0.001)CS(0.002)GS(0.009)GERES(0.988)PERK;TSCSGSGERES(1)PERK 102.5 1.3488e-06 177606000.0 2720.2 3171.6 2438.1000000000004 3017.7 3120.5 2650.69 3215.5 2815.0 4064.6 3910.7 3815.2 True False 3179.3032574951694 3333.020893001106 2783.8592414349405 3757.0366354697 2661.4785837013546 2931.1842564143813 3799.7147278938296 3214.0348705759407 3143.9745898324404 3027.270153900893 2867.780545836678 1.1086285044058712 1.1622301078232238 0.9707364970713778 1.3100851252108556 0.9280621516054205 1.0221089827357084 1.3249670493127845 1.120739477517532 1.0963093373364043 1.0556143001582723 1.0 11.48571891206774 -10.138604348425968 0.8710418358106602 1.007213044766621 1.1161481163979985 0.072544434059163 0.11739150179639664 0.8686584473265749 1.3071994284669437 0.05038369262914719 0.021769330355447817 7.26767756923925e-11 10.138604348425968 0.1089350716313775 TSCSGSGERES(ph)PERK ddPTM_A549_PD325901_60min_R1 4 TSCSGSGERESPERK 15 2 Q9H8Y5;C9JQZ3;C9K022 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 TSCSGSGERES(0.999)PERK;TSCSGSGERES(1)PERK;TSCSGSGERES(1)PERK;TSCSGSGERES(1)PERK 187.47 3.8539e-34 503628000.0 14233.2 13454.7 15622.6 13811.199999999999 15110.8 14238.0 14592.5 14762.8 11501.900000000001 13921.7 15109.4 True False 15678.143986071953 14588.574788273763 16682.8435823255 14664.286456488995 14049.469537430008 14122.05044859385 15147.825572822387 14468.344372807447 11018.515141934684 13042.68148610782 13251.039586378074 1.1831633196680595 1.100938133432992 1.258983755468913 1.1066517733117123 1.060254136729975 1.0657315115948462 1.1431424284924927 1.0918648516966736 0.8315208078663955 0.9842760940443915 1.0 13.693817927699127 -8.642348079486302 6.187191307651139 0.92077530381575 1.127884223255431 0.6129663377195371 0.06647532441450975 0.10669684217098825 5.428409738358647 0.013337146324911243 0.01511525583325917 2.2785151496458726e-09 8.642348079486302 0.2071089194396809 TSDDEVGS(ph)PKEESR ddPTM_A549_MK2206_60min_R1 4 TSDDEVGSPKEESR 14 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 TSDDEVGS(0.999)PKEES(0.001)R;TSDDEVGS(0.997)PKEES(0.003)R;TSDDEVGS(1)PKEESR;TSDDEVGS(1)PKEESR 141.85 5.1428e-13 306887600.0 2972.46 4224.18 4213.04 2984.0299999999997 4881.599999999999 3153.7400000000002 3029.02 3785.16 5187.79 5311.17 5432.5 True False 3474.138578330302 4439.172719068428 4810.5124230076935 3715.1174839581954 4163.523106616419 3487.4666735168157 3579.3537257300477 4321.718021566336 4012.7638481983067 4111.373008232238 4083.4603206274264 0.8507829893144396 1.0871105313902856 1.178048038989774 0.9097963962552635 1.0196066031509008 0.8540469111209495 0.8765491628874399 1.058347010190196 0.9826871165927585 1.0068355476515376 1.0 11.995576493629391 TSDDEVGS(ph)PKEESR ddPTM_A549_PD325901_60min_R1 4 TSDDEVGSPKEESR 14 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 TSDDEVGS(0.999)PKEES(0.001)R;TSDDEVGS(0.999)PKEES(0.001)R;TSDDEVGS(1)PKEESR;TSDDEVGS(1)PKEESR 152.89 4.7125e-14 344882800.0 7569.200000000001 7435.299999999999 7809.5 7883.74 8944.0 8220.9 7755.2 9377.1 9457.3 8847.1 10036.7 True False 8337.619611849472 8061.89882518762 8339.499632338473 8370.700714527378 8315.804295124944 8153.951716030711 8050.328379808274 9190.066384307353 9059.842569646655 8288.492596144471 8802.24952788337 0.9472146393303138 0.9158907390263704 0.947428223424135 0.9509728948277425 0.944736259609832 0.9263486214746571 0.9145762517077942 1.0440588346416986 1.0292644557447834 0.9416334506183399 1.0 13.103656554774151 -8.258633805206097 24.999945104309486 1.0164734180056365 0.9356492154060833 0.5756489751052938 0.027481934836171257 72.28650506873088 644131.9250862318 0.0029053838317571155 0.0036627484541393498 5.51272330382094e-09 8.258633805206097 -0.08082420259955325 TSDDEVGS(ph)PKEESRK ddPTM_A549_MK2206_60min_R1 2 TSDDEVGSPKEESRK 15 2 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 TSDDEVGS(0.995)PKEES(0.004)RK;TSDDEVGS(1)PKEESRK 116.29 1.9464999999999999e-07 36698000.0 2905.3 3573.8 3887.2000000000003 2798.7 4916.7 3366.6000000000004 3101.2 2669.0 4739.7 5169.9 5837.8 True False 3395.643612234655 3755.6911550660093 4438.4634113883385 3484.381625638416 4193.459943113105 3722.8513774317853 3664.6478974169954 3047.3389234696956 3666.1655177456123 4002.015999348513 4388.113144916482 0.7738277250595559 0.8558783766587428 1.0114742407064379 0.7940500872624453 0.9556407969952009 0.8483945729030743 0.8351306760771192 0.6944531334612373 0.8354765241166974 0.9120129466088966 1.0 12.099385009925857 -10.59948030702798 1.013145784840046 0.9952725124093349 0.8485701923786211 0.18294073143754463 0.08385239401447919 0.4759802523706192 0.9108127584264111 0.04630148766461316 0.01442425209803272 2.5148940476364546e-11 10.59948030702798 -0.14670232003071382 TSDDEVGS(ph)PKEESRK ddPTM_A549_PD325901_60min_R1 1 TSDDEVGSPKEESRK 15 2 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 TSDDEVGS(1)PKEESRK 104.89 1.1118999999999999e-06 21834000.0 4033.5 4347.6 4430.3 3993.5 4476.4 5273.7 4928.5 5162.1 5231.4 6025.5 6918.4 True False 4442.977950694238 4713.987509903524 4730.9667995581185 4240.169425103454 4161.993106741646 5230.752735689664 5116.056764478681 5059.137865910894 5011.542450683547 5645.048901681738 6067.480659351009 0.7322607520547858 0.7769266643872158 0.7797250729208179 0.6988352601616684 0.6859507826081512 0.8620963179549973 0.8431929249900411 0.8338119476514376 0.8259676020491168 0.9303777331340591 1.0 12.566881889323563 -12.024760441541508 0.1711232481520646 1.2999946322068865 0.7016386675964882 0.7148028589675085 0.0484958117804751 6.264062233679424 0.17456844633775873 0.8350410403144625 0.08185724529902057 9.445817674412969e-13 12.024760441541508 -0.5983559646103983 TSDIFGS(ph)PVTATSR ddPTM_A549_MK2206_60min_R1 1 TSDIFGSPVTATSR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 TSDIFGS(1)PVTATSR 248.76 1.8685999999999998e-69 160770000.0 4743.7 5857.9 4845.8 4908.7 6721.4 5752.4 5867.7 5818.2 8396.6 8574.7 8834.0 True False 5544.320587669962 6156.04208888611 5533.007305748505 6111.331720359919 5732.690963784741 6361.115149865918 6933.785137260963 6642.947667490208 6494.783506614932 6637.669314612214 6640.2739940032525 0.8349535866557567 0.9270765173915344 0.8332498494407451 0.9203433059959552 0.8633214486272497 0.9579597401568912 1.0442016614860736 1.0004026450549135 0.9780896861304652 0.9996077451934378 1.0 12.697027056600898 -7.404636048944183 4.10733709898202 0.9943475603689487 0.8790270160237795 0.7831632397839376 0.03209712888212277 0.08179247846373386 2.355735471156726 0.004472401272676432 0.0072441228468620965 3.9388001977894117e-08 7.404636048944183 -0.11532054434516914 TSDIFGS(ph)PVTATSR ddPTM_A549_PD325901_60min_R1 2 TSDIFGSPVTATSR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 TSDIFGS(0.998)PVT(0.002)ATSR;TSDIFGS(0.988)PVT(0.012)ATSR 305.19 1.3105999999999997e-135 578000000.0 17278.6 17316.1 16366.3 17290.7 19190.5 18066.1 17952.4 19171.8 18121.0 17562.0 19151.2 True False 19032.71075216696 18775.38851785824 17477.015536556897 18358.70726897115 17842.625483630956 17918.975671396372 18635.588405930215 18789.40340901385 17359.43738747496 16453.132322850335 16795.723809459276 1.1331878856836062 1.117867186365855 1.0405634038060283 1.0930584163709343 1.0623314413864122 1.0668772524887844 1.1095436324950008 1.1187016184698002 1.0335629225873675 0.9796024577151003 1.0 14.03580634921037 -8.930128596858797 4.173050653673133 1.0140906092709197 1.090457307387618 0.6509653863381379 0.028759091045585442 0.10807973780893151 3.492089532058294 0.005138542610156212 0.005359994583250925 1.1745497131536356e-09 8.930128596858797 0.07636669811669838 TSDIFGSPVT(ph)ATSR ddPTM_A549_MK2206_60min_R1 1 TSDIFGSPVTATSR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 TSDIFGS(0.097)PVT(0.903)ATSR 184.17 5.1257e-26 178230000.0 3366.9 4619.7 3583.1 3026.3 5448.4 4734.1 4307.5 4417.9 6504.7 6307.9 7135.8 True False 3935.15040719818 4854.822997665916 4091.237458670907 3767.743635855772 4646.947577451834 5235.059319758753 5090.116992816876 5044.150854251314 5031.395835871446 4882.941008973186 5363.783921938917 0.7336519264138608 0.9051115906829781 0.7627521015410319 0.7024413530986902 0.8663562225996683 0.9760011581276317 0.9489787558363992 0.9404090335592674 0.938031044705597 0.9103537875567675 1.0 12.389035404636363 -7.058045828773169 3.9034764062431884 0.9656465209581538 0.783640424663696 0.7030111699550874 0.052943596726761466 0.08949032798687448 2.7403854012397204 0.007645211280856095 0.013948690873960877 8.748914477423597e-08 7.058045828773169 -0.18200609629445785 TSDISEPS(ph)PESSILSSR ddPTM_A549_MK2206_60min_R1 2 TSDISEPSPESSILSSR 17 0 Q96JQ2 Q96JQ2 CLMN Calmin 1 TSDISEPS(0.994)PES(0.005)S(0.001)ILSSR;TSDIS(0.001)EPS(0.999)PESSILSSR 156.0 4.2045999999999997e-22 8656800.0 2496.7 2643.7 2026.5 2547.2 3352.8 2667.0 2478.8999999999996 2443.0 4214.2 3844.7 3747.0 True False 2918.081921545544 2778.2530378443143 2313.888172252127 3171.2641143481524 2859.607561427302 2949.2201697886776 2929.2840425986683 2789.302731373722 3259.6904286945496 2976.1795997398826 2816.516488060922 1.0360606564581294 0.9864146187750704 0.8215425622610725 1.1259526183464534 1.015299421661134 1.0471162452945972 1.040037952916577 0.9903377960673913 1.1573482500500958 1.0566881508969554 1.0 11.459696201889859 -6.286074604038879 24.954284203431815 1.0639516420172608 0.9518467594360385 0.319235464751938 0.0678347394599117 679.332142551352 688129.2264116935 0.01081844513302875 0.025150184180992182 5.1751792397388e-07 6.286074604038879 -0.11210488258122231 TSDISEPS(ph)PESSILSSR ddPTM_A549_PD325901_60min_R1 2 TSDISEPSPESSILSSR 17 0 Q96JQ2 Q96JQ2 CLMN Calmin 1 TSDISEPS(0.999)PES(0.001)SILSSR;TSDISEPS(0.999)PES(0.001)SILSSR 171.56 7.406e-30 13693100.0 5940.799999999999 6282.0 6386.9 6825.4 7020.599999999999 7073.299999999999 5901.8 6776.5 7137.0 7869.200000000001 8334.9 True False 6543.90564261419 6811.40618668092 6820.353441549726 7246.989456391911 6527.497275755163 7015.6973899451405 6126.396228588882 6641.337391438594 6837.056709586056 7372.337369033926 7309.760139284335 0.8952285051660906 0.9318234876237393 0.9330475024612059 0.9914127575055328 0.8929837848816528 0.9597712176957991 0.8381118000937153 0.9085574991368754 0.9353325662277395 1.0085607774478518 1.0 12.835608351367506 -10.129877031810091 0.8488092286810701 0.9954581852999222 0.9212840357822244 0.41343616699796903 0.03785331854054639 0.44148041752264455 0.6305927856013164 0.017297157870759 0.0073811114204409235 7.415201691009345e-11 10.129877031810091 -0.07417414951769785 TSDLRDEAS(ph)SVTR ddPTM_A549_MK2206_60min_R1 3 TSDLRDEASSVTR 13 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 TSDLRDEAS(0.499)S(0.499)VT(0.003)R;TSDLRDEAS(0.611)S(0.384)VT(0.005)R;TSDLRDEAS(0.811)S(0.187)VT(0.003)R 92.575 2.0065e-06 35448000.0 1135.9 926.01 758.78 626.95 1428.02 987.1899999999999 1244.03 1251.06 1746.2 1324.83 1024.95 True False 1327.6121499113153 973.1399536914982 866.3864136893505 780.5527781448551 1217.9601496866555 1091.6537905563134 1470.0541480148538 1428.4015862105634 1350.6884881084013 1025.5499828656052 770.4266278190664 1.7232168541078816 1.2631182757094928 1.124554087833034 1.0131435622292209 1.580890516640725 1.4169471188276306 1.9081040230609656 1.8540397419207861 1.753169528851758 1.331145557324187 1.0 9.589513756869177 -6.7919578064743495 24.99010938957003 1.461847802160821 1.268554461795977 0.11666452139231809 0.29804206189369264 517.0303509606091 423370.58274645614 0.05577178794650353 0.10540743683418627 1.6145154061326e-07 6.7919578064743495 -0.19329334036484402 TSDLRDEAS(ph)SVTR ddPTM_A549_PD325901_60min_R1 3 TSDLRDEASSVTR 13 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 TSDLRDEAS(0.5)S(0.5)VTR;TSDLRDEAS(0.626)S(0.368)VT(0.005)R;TSDLRDEAS(0.499)S(0.499)VT(0.003)R 120.66 2.8439e-06 29933000.0 2475.8999999999996 2110.13 2492.88 2511.17 2752.6 2429.61 2588.62 1959.4699999999998 2499.92 2585.65 2569.1 True False 2727.2515453387537 2287.9580606018803 2662.061827705221 2666.279267619142 2559.266871954485 2409.8240616946296 2687.131350647217 1920.3868336755227 2394.8570561059787 2422.3916177302094 2253.1169868667134 1.2104349491108286 1.0154634996488214 1.1815018231286802 1.1833736477780459 1.1358783795392344 1.0695512375705978 1.1926284193454435 0.8523245108307046 1.0629084375402875 1.0751290908772992 1.0 11.13770650812924 -8.207954753711892 24.99976573141003 1.0172327499161442 1.1366255578877587 0.43932476854850644 0.07680744030617596 250.56198414837175 117117.67959483138 0.011443947816323012 0.014774067923138873 6.195056139336247e-09 8.207954753711892 0.11939280797161445 TSDLRDEASS(ph)VTR ddPTM_A549_MK2206_60min_R1 1 TSDLRDEASSVTR 13 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 TSDLRDEAS(0.177)S(0.822)VT(0.001)R 107.99 6.4471e-05 8698900.0 942.57 1075.8 775.81 997.59 1702.6 1243.9 1077.1 1243.5 1867.5 1196.1 1515.5 True False 1101.6527723760098 1130.5536248866783 885.8315237675406 1241.9995947835173 1452.1497954205815 1375.5286723660063 1272.7951277917723 1419.7699330590349 1444.5142317846974 925.9001792724724 1139.1595243278155 0.9670750661774633 0.992445395699768 0.7776185028082382 1.0902771457899056 1.2747554353965065 1.207494335069239 1.1173107019781197 1.2463310912462409 1.2680526308526128 0.8127923785027553 1.0 10.153754076345074 -6.47134678528734 8.438189405921015 1.1536816569276918 0.921946541313813 0.3216143051619256 0.137580799166807 0.2642681307764134 40.58021969559036 0.01669216185825661 0.03868852823446123 3.377949982915934e-07 6.47134678528734 -0.23173511561387872 TSDLRDEASS(ph)VTR ddPTM_A549_PD325901_60min_R1 1 TSDLRDEASSVTR 13 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 TSDLRDEAS(0.05)S(0.95)VTR 109.07 1.8648e-05 19297000.0 577.18 577.84 535.27 681.22 633.24 674.95 437.09 670.4 630.58 479.84 798.56 True False 635.7748887025415 626.5366047296566 571.5966410399917 723.2974122371285 588.7634069594053 669.4534309789591 453.72369913482527 657.0283460813745 604.078915501019 449.54282050999313 700.3421824889195 0.9078060762284591 0.8946149759293833 0.8161676610833523 1.0327771628243627 0.8406796301588194 0.9558947721809558 0.6478600182590085 0.9381533234887928 0.8625482379973255 0.6418902527224334 1.0 9.451916175203042 -10.685571699932256 0.8827320210351548 1.0021555871338124 0.8764571754648065 0.0 0.14058801730550352 0.7789956619765678 1.0498154354281004 0.06421974187055234 0.015776584537354643 2.062663103431099e-11 10.685571699932256 -0.12569841166900586 TSDS(ph)LSR ddPTM_A549_MK2206_60min_R1 2 TSDSLSR 7 0 Q96S38-2;Q96S38;F5H7T0;F6RJM5;A0A087X1U5 Q96S38-2 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 T(0.002)S(0.025)DS(0.937)LS(0.036)R;T(0.001)S(0.002)DS(0.991)LS(0.005)R 83.78299999999999 0.014353 80916000.0 1890.15 1997.82 1828.63 1837.69 2666.0 1885.3899999999999 2073.92 1969.23 2516.3999999999996 2781.1 2871.6 True False 2209.16111026928 2099.500504620846 2087.9572309032346 2287.924132497038 2273.834931628844 2084.900718379406 2450.7244187446963 2248.3743830139465 1946.4394178650668 2152.847578442164 2158.5024678718282 1.023469346526807 0.9726653250903369 0.9673175092367869 1.0599590070206466 1.0534317034488858 0.9659014754034589 1.1353818006800724 1.0416362346023758 0.9017545482744597 0.9973801793077217 1.0 11.075815026933038 -8.741983803379163 24.999052942725502 0.95360630994247 1.0271314767623907 0.1992153237770692 0.05288220792224329 246.8973326124594 317245.57207879156 0.009765018299661433 0.011064585363552579 1.8114076461736423e-09 8.741983803379163 0.07352516681992072 TSDS(ph)TPDPQR ddPTM_A549_MK2206_60min_R1 1 TSDSTPDPQR 10 0 P52948-2;P52948-5;P52948;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 TS(0.001)DS(0.75)T(0.249)PDPQR 101.39 1.2551999999999999e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TSDS(ph)TPDPQR ddPTM_A549_PD325901_60min_R1 1 TSDSTPDPQR 10 0 P52948-2;P52948-5;P52948;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.042)S(0.042)DS(0.458)T(0.458)PDPQR 62.303000000000004 0.0070967 2273600.0 178.72 265.99 249.61 392.27 339.49 532.29 431.63 381.7 285.0 463.28 450.96 True False 196.86352283328978 288.40591079198623 266.5500356268654 416.4996269901919 315.64539357691933 527.9552067201871 448.05591584699863 374.0866940621426 273.0224411141973 434.02842173614073 395.4947788709718 0.49776516240057755 0.7292281117219938 0.6739660037682217 1.0531103044626358 0.7981025551791091 1.334923328766446 1.1328996987673878 0.9458701202833996 0.6903313411458954 1.0974314831037006 1.0 8.627514838842762 -6.136140692878051 5.70768304537374 0.9182196043611369 0.6344734728527863 0.39422212862387607 0.18389270795386087 0.23987687050903345 10.16209887777805 0.02859151400594449 0.07743986235867602 7.309022639844631e-07 6.136140692878051 -0.2837461315083506 TSDST(ph)PDPQR ddPTM_A549_MK2206_60min_R1 1 TSDSTPDPQR 10 0 P52948-2;P52948-5;P52948;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 TSDS(0.143)T(0.857)PDPQR 107.11 0.00029132 16150000.0 1610.5 1699.9 1770.2 1588.0 2034.5 1666.7 1486.9 1602.1 2452.1 2386.3 1842.9 True False 1882.3130270553513 1786.4176491400503 2021.2409782979091 1977.0600712880282 1735.2277450858535 1843.0690877340805 1757.0504832546533 1829.2025812254763 1896.7032651990667 1847.233172642672 1385.2570685474968 1.3588185686206529 1.2895928775250272 1.4591089438852454 1.4272152917877279 1.25263951686983 1.3304888526334104 1.2683930825178884 1.3204787925344974 1.369206704130262 1.3334948541930758 1.0 10.43593801335846 -10.856820617665939 0.6162414509165677 0.9371357109233872 1.3479459223719228 0.0 0.11565759106321143 0.3983895774516535 0.20178030695330412 0.09316543233960466 0.012955457236945049 1.3905268601232954e-11 10.856820617665939 0.4108102114485356 TSDST(ph)PDPQR ddPTM_A549_PD325901_60min_R1 3 TSDSTPDPQR 10 0 P52948-2;P52948-5;P52948;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.004)S(0.004)DS(0.167)T(0.824)PDPQR;TSDS(0.093)T(0.907)PDPQR;TS(0.001)DS(0.097)T(0.902)PDPQR 115.04 2.0855e-08 3461700.0 398.16 682.32 661.01 500.1 835.46 896.57 801.21 575.23 738.78 859.63 866.43 True False 438.58091009009985 739.8215010022486 705.8701135760357 530.9900411904936 776.7801717805331 889.2686311768362 831.7004849889348 563.7565863907945 707.7316457766549 805.3528150946267 759.8646027522974 0.5771829724684117 0.9736227984861371 0.9289419602114787 0.69879560025194 1.0222612936133175 1.170298797911925 1.0945377399821514 0.7419171578052429 0.9313917811320434 1.0598635759286155 1.0 9.569598563146826 -5.25996426286009 24.134810081285536 0.9580145455476325 0.5771827744408069 0.4074967439238133 0.133367907667581 58.951758908893005 964361.877698271 0.01763586626940168 0.15325165039761549 5.495860962308336e-06 5.25996426286009 -0.38083177110682565 TSDST(ph)PDPQRVPLR ddPTM_A549_MK2206_60min_R1 2 TSDSTPDPQRVPLR 14 1 P52948-2;P52948-5;P52948;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 TSDS(0.095)T(0.905)PDPQRVPLR;TSDS(0.094)T(0.906)PDPQRVPLR 115.91 1.5084e-06 50005000.0 1911.53 2453.5 2457.8 1937.31 2664.2 2046.9 1854.85 1767.2199999999998 3512.3 3499.2 3308.7 True False 2234.1495315784655 2578.3726702541985 2806.3529976616205 2411.9510369691516 2272.2997092443998 2263.501599377747 2191.8522354327074 2017.7288468842694 2716.7696579905714 2708.7282897000546 2487.058474525533 0.898310013400342 1.0367157413723802 1.1283823948678975 0.9698006949471867 0.9136494909625703 0.9101119344648965 0.8813030565559408 0.8112912774474274 1.0923625985548497 1.0891293137837503 1.0 11.280224712569247 TSDST(ph)PDPQRVPLR ddPTM_A549_PD325901_60min_R1 2 TSDSTPDPQRVPLR 14 1 P52948-2;P52948-5;P52948;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 TSDS(0.097)T(0.903)PDPQRVPLR;TSDS(0.195)T(0.805)PDPQRVPLR 114.64 1.6787000000000001e-06 64048000.0 5541.5 5531.8 4929.6 5999.3 7395.1 6472.9 6237.5 6557.7 7026.2 6913.5 7899.8 True False 6104.069000563314 5997.984199853789 5264.152300092929 6369.863135601136 6875.693687710022 6420.186848483158 6474.871475790968 6426.901529083873 6730.913248268675 6476.980430134706 6928.174680958181 0.8810501007343408 0.8657380155755909 0.7598180678904138 0.919414337676626 0.9924249898905694 0.9266779699029231 0.9345710485024146 0.9276471545597663 0.9715276473568613 0.9348754510962946 1.0 12.75825959004068 -6.664778813418908 0.35217687663606206 0.9953907165801755 0.8002348810756474 0.413949622593088 0.04893882859953844 1.4724660611154528 0.24662348546296528 0.01721516556029765 0.10771936153047855 2.16382027880898e-07 6.664778813418908 -0.19515583550452809 TSDVNETQPPQS(ph)E ddPTM_A549_MK2206_60min_R1 2 TSDVNETQPPQSE 13 0 P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35580-2;P35580-5 MYH10 Myosin-10 1 TSDVNETQPPQS(1)E;TSDVNETQPPQS(1)E 107.53 8.2235e-05 11855300.0 1605.65 1585.12 1366.95 1531.6100000000001 2195.0 1638.83 1522.35 1885.9 2722.1 2700.8 2273.53 True False 1876.644465626467 1665.7958374050675 1560.8040646731024 1906.8545187565858 1872.1184076989166 1812.2499028326897 1798.941289382419 2153.232100326525 2105.5486963004687 2090.6874042129357 1708.9497547641165 1.098127350084378 0.9747482819557761 0.913311851516979 1.1158049049954577 1.0954789059654488 1.0604465682976336 1.052658970439259 1.2599739075557153 1.232071739049516 1.2233755839717533 1.0 10.738894265281608 -6.290980394203585 22.73917223773393 1.1142667975549916 0.9933310891486057 0.3066706707401077 0.08782645522386649 258.84715928363414 199247.0994238176 0.014617896258121545 0.03397727940347336 5.117049354339496e-07 6.290980394203585 -0.1209357084063859 TSDVNETQPPQS(ph)E ddPTM_A549_PD325901_60min_R1 2 TSDVNETQPPQSE 13 0 P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35580-2;P35580-5 MYH10 Myosin-10 1 TSDVNETQPPQS(1)E;TSDVNETQPPQS(1)E 103.97 0.00011755 18061900.0 2149.1000000000004 1711.23 2061.39 2019.15 2140.29 2203.7 1864.04 2098.7 2338.3999999999996 2198.2 2572.7 True False 2367.2750499161984 1855.4413576622076 2201.288321545067 2143.8683096776363 1989.9634139996608 2185.753797834407 1934.9770622418266 2056.8397821017 2240.125180005047 2059.4052768528413 2256.274209688995 1.0491965204187232 0.8223474565699892 0.9756297847540848 0.9501807450846798 0.8819687808575171 0.9687447511690928 0.8575983601339591 0.9116089583744411 0.9928426121193069 0.912746007559387 1.0 11.139726696777517 -8.769835300866008 22.714506594758 0.9966201510895527 0.9236098636831 0.027501697166636863 0.06379755746532287 55.29736178888556 149601.92173233282 0.009015787770131586 0.009687085385343172 1.6988878059403906e-09 8.769835300866008 -0.07301028740645266 TSEIEPKNS(ph)PEDLGLSLTGDSCK ddPTM_A549_MK2206_60min_R1 3 TSEIEPKNSPEDLGLSLTGDSCK 23 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 TSEIEPKNS(1)PEDLGLSLTGDSCK;TSEIEPKNS(1)PEDLGLSLTGDSCK;TSEIEPKNS(1)PEDLGLSLTGDSCK 180.35 3.4152999999999996e-42 97762000.0 8423.5 9058.900000000001 8414.1 7562.4 11137.2 8299.8 7220.0 6324.200000000001 11296.2 12320.8 11364.0 True False 9845.18086519761 9519.95931630967 9607.345901873483 9415.18833948904 9498.932633359635 9178.079327038655 8531.78054280624 7220.67471705022 8737.628736324663 9537.52272283277 8542.005169555461 1.1525608647822871 1.1144876556899934 1.124717874921804 1.1022222713053005 1.1120260927978312 1.07446426744744 0.9988030179628475 0.8453137844947002 1.0229013636594864 1.1165437778971885 1.0 13.060359055750286 -7.597030406890382 3.014472024932127 0.9952462808093768 1.11904471607816 0.4958827325390659 0.05995323049208467 0.1433799589160397 2.644230130288964 0.007904921713245876 0.012234597816455344 2.5291209152308632e-08 7.597030406890382 0.1237984352687832 TSEIEPKNS(ph)PEDLGLSLTGDSCK ddPTM_A549_PD325901_60min_R1 2 TSEIEPKNSPEDLGLSLTGDSCK 23 1 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 TSEIEPKNS(1)PEDLGLSLTGDSCK;TSEIEPKNS(1)PEDLGLSLTGDSCK 232.07 1.1033e-88 207846000.0 9421.2 9765.8 9691.6 9067.400000000001 8488.6 9991.2 9873.4 10850.8 7731.8 9859.2 9829.7 True False 10377.63328847912 10588.798239078082 10349.330256325178 9627.472704440479 7892.390020080233 9909.834979771804 10249.13763993179 10634.372281712067 7406.859334058769 9236.688429418404 8620.709215602248 1.2038027300233132 1.2282978087132175 1.2005195857429425 1.116784299720507 0.9155151650163699 1.1495382493399062 1.1888972686124617 1.2335843856634645 0.8591937332317642 1.0714534266741444 1.0 13.073590847682162 -8.762870101931323 24.999926262943795 0.9335081476724825 1.1503456987552334 0.3752453613017974 0.09775278602070095 23.194337051836733 405288.6496421541 0.017334036923860794 0.018945668066737423 1.7263541696506977e-09 8.762870101931323 0.21683755108275093 TSES(ph)DEDKR ddPTM_A549_MK2206_60min_R1 2 TSESDEDKR 9 1 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;D6RGZ3 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 T(0.028)S(0.133)ES(0.84)DEDKR;T(0.147)S(0.147)ES(0.707)DEDKR 60.255 0.0034165999999999997 12059700.0 3386.5 3694.9 2396.7 1861.93 802.86 629.26 776.28 401.72 672.34 4139.3 4441.6 True False 3958.0584080241842 3882.9546278060907 2736.588098907807 2318.102933585214 684.7603575422106 695.8478755310181 917.3200276689234 458.6650402159032 520.0560635063578 3204.2292551312985 3338.628138076166 1.185534370504933 1.1630389690669727 0.8196744248626396 0.6943279807498974 0.20510231425078487 0.20842329446489055 0.2747595688202386 0.13738128993311666 0.1557693885027975 0.9597442789713283 1.0 11.705039697251644 -6.048434242198238 1.8298293698401447 0.4811070654724477 1.1954776439360237 0.4836974060279894 0.29300262050638926 0.32231480429732856 2.028621336219687 0.05393726143139686 0.2313261380716387 8.944699560003115e-07 6.048434242198238 0.7143705784635761 TSES(ph)DEDKR ddPTM_A549_PD325901_60min_R1 2 TSESDEDKR 9 1 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;D6RGZ3 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 T(0.292)S(0.292)ES(0.415)DEDKR;T(0.017)S(0.096)ES(0.887)DEDKR 95.477 0.00038421 24269000.0 3427.7 3321.5 3471.6000000000004 2390.07 3387.44 2863.39 2240.75 2802.2 2714.92 3390.4 3620.1000000000004 True False 3775.6775806606256 3601.414461805265 3707.2036524266887 2537.699195657194 3149.51790043359 2840.0715011939287 2326.022967435448 2746.3079227166268 2600.821353788618 3176.3295653907176 3174.8506497046405 1.1892457306651198 1.1343571270479473 1.1676781245667647 0.7993129364662488 0.9920208059949506 0.8945527883203398 0.7326401220327767 0.865019563352411 0.8191948663886205 1.00046582212811 1.0 11.632473011350559 -6.249270802755166 24.520799739465875 0.8942924920604577 1.1608200476896078 0.6878051649755279 0.08268354698354563 290.1925492441989 584762.8218678517 0.012704531415906902 0.033326020124393035 5.632863111532156e-07 6.249270802755166 0.2665275556291501 TSES(ph)PSKPGEK ddPTM_A549_MK2206_60min_R1 4 TSESPSKPGEK 11 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;H0YA91;H0Y944;E7EN75;D6RBR1;D6RGF7;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 T(0.024)S(0.005)ES(0.967)PS(0.003)KPGEK;TS(0.002)ES(0.997)PSKPGEK;T(0.068)S(0.013)ES(0.893)PS(0.026)KPGEK;T(0.032)SES(0.967)PS(0.001)KPGEK 191.48 3.015e-19 1385223000.0 36905.9 37477.0 36035.8 34991.2 38626.4 32313.300000000003 31513.7 34551.4 40185.700000000004 52013.8 54772.899999999994 True False 43134.713657374814 39384.41922279052 41146.21830626359 43564.04557081464 32944.50772808269 35732.671958167426 37239.33137005994 39449.16675922475 31083.703113376363 40263.84645484702 41171.277274863125 1.047689469758337 0.9565994020505272 0.9993913482831188 1.0581174171492709 0.8001818235597165 0.8679029246436275 0.9044978401191403 0.958172040567471 0.7549851539911863 0.9779596145643475 1.0 15.329350586273408 -6.751698930915915 24.990807353427005 0.8829340263522634 1.0100988378870301 0.3785599216163814 0.07323719402551705 200.97262331193434 515626.212254045 0.013264632465085724 0.02734380143302017 1.7713364891046174e-07 6.751698930915915 0.12716481153476678 TSES(ph)PSKPGEK ddPTM_A549_PD325901_60min_R1 4 TSESPSKPGEK 11 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;H0YA91;H0Y944;E7EN75;D6RBR1;D6RGF7;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 TSES(0.999)PSKPGEK;T(0.077)S(0.007)ES(0.913)PS(0.003)KPGEK;TS(0.003)ES(0.919)PS(0.078)KPGEK;T(0.081)S(0.081)ES(0.765)PS(0.073)KPGEK 188.63 2.0257000000000002e-19 1218438000.0 27955.7 27684.800000000003 30089.199999999997 26092.0 30423.8 27171.899999999998 31212.6 30523.100000000002 28999.5 25466.9 27552.5 True False 30793.74208410137 30017.89525581406 32131.234053058295 27703.643580768556 28286.937244412136 26950.621055214746 32400.412573190093 29914.292825591292 27780.751863477763 23858.91558779167 24163.717169687898 1.2743793460192658 1.2422714206185925 1.3297305968042543 1.1464975933223265 1.1706368290014832 1.11533423711079 1.340870377916635 1.2379839002219901 1.1496886703477578 0.9873859812314563 1.0 14.560554784948003 -9.891808663583982 0.5016428754981166 0.9873835944003734 1.2383154171967408 0.628917884138712 0.06878115637805762 0.5043150659426402 0.2542187324464747 0.055418266422255856 0.019993029766425845 1.2828956614312913e-10 9.891808663583982 0.2509318227963674 TSES(ph)PSKPGEKK ddPTM_A549_PD325901_60min_R1 1 TSESPSKPGEKK 12 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;H0YA91;H0Y944;E7EN75;D6RBR1;D6RGF7;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 T(0.002)S(0.015)ES(0.902)PS(0.081)KPGEKK 82.90799999999999 0.00020026 17663000.0 1563.4 1378.1 1483.0 1436.5 1615.1 1871.9 1781.2 2097.4 1608.2 1450.2 1999.9 True False 1722.1152170857497 1494.2373234423708 1583.6452980034512 1525.2293424717948 1501.660947792519 1856.655867026466 1848.984540710039 2055.565711621531 1540.6129466661462 1358.6341245073195 1753.9249784106262 0.9818636705010599 0.8519391318529602 0.9029150719083325 0.8696092257343464 0.856171709894511 1.0585719970240304 1.054198191752508 1.1719804078987723 0.8783801848025568 0.7746249932186313 1.0 10.776371324582888 -7.239650154647306 24.812564525113654 0.9769015399203371 0.8895533241868533 0.17882470346235446 0.10157087506433811 1061.2226146167234 1208471.615364518 0.013917863838786593 0.024092454128014886 5.759036689812688e-08 7.239650154647306 -0.08734821573348384 TSESPS(ph)KPGEK ddPTM_A549_PD325901_60min_R1 1 TSESPSKPGEK 11 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;H0YA91;H0Y944;E7EN75;D6RBR1;D6RGF7;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 1 T(0.002)SES(0.454)PS(0.543)KPGEK 102.5 6.3934e-05 1361100000.0 7320.6 7338.7 7446.4 7299.3 8152.9 7378.2 8343.1 7983.0 8120.5 6881.7 6514.2 True False 8063.781922859117 7957.158004169891 7951.757482840791 7750.161183086924 7580.2684299781 7318.114385434417 8660.601236019502 7823.772802457648 7779.223624799427 6447.188287561727 5712.9946969160965 1.4114807295746288 1.392817327218106 1.3918720224146524 1.356584697561596 1.3268467471307068 1.2809594221021723 1.515947711398111 1.3694696420217158 1.3616717741745308 1.128512913033501 1.0 12.480031475403763 -10.5401860909025 0.6506626280266946 0.9715534203744357 1.3830475775103133 0.7638753956779469 0.06607187900973477 0.24264269709930528 0.1665227842112716 0.054820950898631024 0.012046650495567603 2.882795988791482e-11 10.5401860909025 0.41149415713587756 TSESPSKPGEK ddPTM_A549_PD325901_60min_R1 1 TSESPSKPGEK 11 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;H0YA91;H0Y944;E7EN75;D6RBR1;D6RGF7;P20810-5;F8W7E0;E9PSG1 P20810-6;P20810-5 CAST Calpastatin 0 45.077 0.049688 3268700.0 1483.8 1172.2 1588.3 1593.8 1664.0 1602.8 1369.4 1436.1 1479.9 1677.4 1749.0 False True 1634.4342836841727 1270.9854078362573 1696.09158922379 1692.2454062175734 1547.1263804883617 1589.7473282066458 1421.5132663644333 1407.4558589013434 1417.704949490878 1571.4886777331258 1533.884087824485 1.0655526689779398 0.828605901792033 1.105749516985579 1.1032420374199807 1.008633176893215 1.0364194666504376 0.9267409953907092 0.917576412763721 0.9242582022619555 1.0245159267294932 1.0 10.582973750397928 -7.752980995771612 24.95060805856907 0.9565267331820252 1.0223108662074343 0.15783359676423359 0.07582725499786035 270.9502576360486 799248.6413033766 0.011469984763612466 0.01685934868030577 1.7661151021663976e-08 7.752980995771612 0.06578413302540909 TSETDDGVVGKSS(ph)DGEDEQQVPK ddPTM_A549_MK2206_60min_R1 2 TSETDDGVVGKSSDGEDEQQVPK 23 1 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 TSETDDGVVGKS(0.022)S(0.978)DGEDEQQVPK;TSETDDGVVGKS(0.199)S(0.801)DGEDEQQVPK 267.48 2.1047999999999993e-124 20779000.0 6754.5 7270.5 7407.3 7292.400000000001 11422.5 7247.299999999999 6321.9 6336.3 12552.0 13324.099999999999 13084.900000000001 True False 7894.494468329947 7640.537395183673 8457.766522735345 9079.038327368276 9742.265381294248 8014.204475631605 7470.507398000935 7234.4899291049205 9708.992041425183 10314.176556010654 9835.558205131669 0.80264834020412 0.776828039225801 0.8599172864761793 0.923083178200432 0.9905147403033266 0.8148194854309562 0.7595407644584141 0.7355444173295981 0.9871317762483017 1.0486620424481112 1.0 13.263791217890077 -8.839575934270888 9.822638020752546 0.9941625809599468 0.8371766598065856 0.5509666230124344 0.0714383938271502 0.22135508568182843 26.111483667829464 0.01316208995469392 0.014000602674674316 1.4468518559912535e-09 8.839575934270888 -0.15698592115336119 TSETDDGVVGKSS(ph)DGEDEQQVPK ddPTM_A549_PD325901_60min_R1 1 TSETDDGVVGKSSDGEDEQQVPK 23 1 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 TSETDDGVVGKS(0.137)S(0.863)DGEDEQQVPK 214.02 4.947999999999999e-74 12026000.0 3240.6 3826.9 2829.7 3898.1 4283.5 4673.1 3332.3 4642.1 4079.3 5570.4 5084.7 True False 3569.5833263963696 4149.406293506719 3021.7404583684206 4138.876783772573 3982.6417372727738 4635.04382296137 3459.112500004526 4549.5096738429975 3907.8612071478756 5218.683993349589 4459.314134568986 0.800478104631529 0.9305032496679623 0.6776244882466631 0.928142009930999 0.8931063426097284 1.039407335542951 0.7757050514089574 1.020226325518269 0.876336828763374 1.1702884873917947 1.0 12.122606117958604 -2.3757230241209664 0.0245369896914225 1.551088150012771 1.1311080375290073e-06 0.3042288938979698 0.10962614416356707 1654.3095648864735 3.2218512092369047 71.40853113788488 144.15511162612123 0.004209950368030742 2.3757230241209664 -1.5510870189047334 TSEVYS(ph)DDEEEEEDDKSSEK ddPTM_A549_MK2206_60min_R1 2 TSEVYSDDEEEEEDDKSSEK 20 1 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 TSEVYS(1)DDEEEEEDDKSSEK;TSEVYS(1)DDEEEEEDDKSSEK 200.54 1.8816e-55 23211000.0 5653.299999999999 6809.6 6795.9 5474.2 8304.3 6934.6 5698.0 7000.4 9639.3 8835.4 9289.599999999999 True False 6607.438830085081 7156.179553846746 7759.660809182448 6815.37924574618 7082.748470639692 7668.4147691850685 6733.252843893342 7992.728137825866 7456.013940799056 6839.477003548202 6982.73594008293 0.9462535726371185 1.024838919193292 1.1112636759811787 0.9760327906177757 1.0143228286755999 1.0981962994141226 0.9642714405456059 1.1446413277559713 1.067778304202995 0.9794838387468757 1.0 12.769576701300045 TSEVYS(ph)DDEEEEEDDKSSEK ddPTM_A549_PD325901_60min_R1 2 TSEVYSDDEEEEEDDKSSEK 20 1 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 TSEVYS(1)DDEEEEEDDKSSEK;TSEVYS(1)DDEEEEEDDKSSEK 193.77 1.739e-45 38464000.0 10757.900000000001 10416.8 11072.0 10509.599999999999 12353.099999999999 11830.3 11507.5 11360.4 11459.3 13160.8 12153.6 True False 11850.034088452592 11294.660293762783 11823.412501344721 11158.754122966624 11485.460871881469 11733.957959123456 11945.424209645613 11133.807909938612 10977.705471789188 12329.824841963817 10658.784248018104 1.1117622622538765 1.0596574647678898 1.109264642779796 1.0469068388396625 1.0775582472285314 1.1008720775359788 1.1207116995417885 1.0445664018397627 1.029920975633819 1.1567759094341763 1.0 13.37975527173841 -8.637823467490893 2.1999827907178733 1.0128051842853512 1.0873138286687756 0.0 0.04887033651945068 0.12676405561358414 1.215861245366224 0.0041365774676485586 0.004665137896899322 2.3023775002208524e-09 8.637823467490893 0.07450864438342442 TSFLEGT(ph)LR ddPTM_A549_PD325901_60min_R1 1 TSFLEGTLR 9 0 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 TSFLEGT(1)LR 63.283 0.0072031000000000005 1946800.0 566.58 589.54 669.47 538.8 972.68 641.21 567.94 994.29 770.36 940.07 809.57 True False 624.0987845058488 639.2226047908102 714.904260050149 572.0804522964166 904.3623123638336 635.9881983524976 589.5532674886931 974.4581059445841 737.9844481990631 880.71381976665 709.9980222870596 0.8790148210490637 0.9003160357147669 1.0069102132809966 0.8057493603343004 1.2737532837777263 0.8957605209995374 0.8303590277471654 1.3724800286142214 1.0394176110827085 1.2404454549460255 1.0 9.471671195743276 TSFLEGT(ph)LRR ddPTM_A549_MK2206_60min_R1 4 TSFLEGTLRR 10 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 TSFLEGT(1)LRR;TSFLEGT(1)LRR;TSFLEGT(1)LRR;TSFLEGT(1)LRR 138.24 1.9904e-07 26092900.0 1718.6399999999999 1765.3400000000001 2096.31 1904.7300000000002 2449.77 2694.65 1970.58 1886.2199999999998 3441.95 3610.4 3660.4199999999996 True False 2008.70441528619 1855.1882656232108 2393.5982799772287 2371.38893550658 2089.4120781906963 2979.7960744360958 2328.608878399322 2153.5974613064845 2662.353820664707 2794.8081324683017 2751.436691547361 0.7300565633427418 0.6742616580357822 0.8699448863681141 0.8618729781396319 0.7593894799068216 1.082996415505497 0.8463247166663871 0.7827174319229341 0.9676231435175944 1.015763197842851 1.0 11.425969418402437 -3.0093426934666505 0.18097377090430952 1.0219421072214627 1.6829666527004661e-16 0.48425511227315166 0.08964036877006193 21.308388784612283 0.3092483666025096 0.0965038492845498 5.627076548449659 0.0009787173934598852 3.0093426934666505 -1.0219421072214625 TSFLEGT(ph)LRR ddPTM_A549_PD325901_60min_R1 2 TSFLEGTLRR 10 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 TSFLEGT(1)LRR;TSFLEGT(1)LRR 111.12 0.00010427 45749000.0 1496.22 1751.32 1625.63 1559.37 1836.5300000000002 1698.1 1778.73 1940.0700000000002 2455.55 2183.4 2329.38 True False 1648.1151529410527 1898.9098826580755 1735.955027507317 1655.6887433137772 1707.5384684845492 1684.271236603261 1846.4205435084039 1901.3737818945276 2352.3517729051455 2045.5397513786245 2042.8810271564307 0.8067602229558768 0.9295254385426671 0.8497582602368496 0.8104675315421563 0.8358482191502564 0.8244587982432177 0.9038316568432337 0.9307315289628624 1.1514874051082062 1.0013014581793314 1.0 10.99638947183194 -8.517137431644686 3.1922194309851375 1.0712533340583639 0.8521117894481335 0.7194467308978036 0.05356700755893938 0.09854704294181266 2.077458531471724 0.010961412458645625 0.01287999593029899 3.0399228957603897e-09 8.517137431644686 -0.2191415446102304 TSFNYAMK ddPTM_A549_PD325901_60min_R1 1 TSFNYAMK 8 0 B4DLR8;P15559-3;P15559-2;P15559;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 107.47 0.0050581 6117300.0 6617.7 6624.5 6914.7 7596.2 7834.9 7130.4 7308.7 8295.5 8151.6 8228.8 7905.0 False True 7289.5240323067455 7182.769863684776 7383.973123468958 8065.400021778102 7284.603652937656 7072.332386476582 7586.836577974094 8130.039744806147 7809.016599952596 7709.232163664203 6932.735113923702 1.051464380582848 1.0360658161104273 1.0650880211244462 1.1633792275691532 1.0507546492447493 1.0201359593665296 1.0943496979621643 1.172703069020736 1.1263976585906148 1.1120044307160943 1.0 12.759208923722008 -4.0742327540446315 17.175020200696665 1.0711684817348888 1.0444579728903394 0.0 0.055440972689060404 0.0 0.0 0.008369853537814618 0.0 8.428829054058045e-05 4.0742327540446315 -0.026710508844549397 TSFSLSRPS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 TSFSLSRPSSPR 12 1 Q8N1G1;K7ESH4;A0A2R8Y7I5 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 TSFSLS(0.002)RPS(0.499)S(0.499)PR;TSFSLSRPS(0.5)S(0.5)PR 82.069 1.3979000000000001e-05 7086500.0 1405.7 1254.8 1270.9 1576.9 1858.9 1532.3 1238.2 1316.6 2494.2 1829.4 1658.4 True False 1642.9477939346223 1318.6639603158624 1451.1327303800772 1963.2405707897315 1585.4582724699399 1694.44696894158 1463.164912479596 1503.2320819183965 1929.2676824189518 1416.1372694265206 1246.5735104884534 1.317971046321091 1.0578308853997398 1.164097197774939 1.5749095855730655 1.2718530107772776 1.3592836320399857 1.173749401995775 1.2058912444957817 1.5476565691364592 1.136023874654312 1.0 10.283752245782798 -11.121245208874544 1.488530503682959 1.0007126468665275 1.324262226137559 0.21753960362077673 0.1551597855169706 0.37891532050766996 1.5079457752091818 0.1197078959938801 0.026109467259332386 7.5640569695876e-12 11.121245208874544 0.32354957927103145 TSFSLSRPS(ph)SPRVEDLK ddPTM_A549_PD325901_60min_R1 3 TSFSLSRPSSPRVEDLK 17 2 Q8N1G1;K7ESH4;A0A2R8Y7I5 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 T(0.008)S(0.008)FS(0.007)LS(0.014)RPS(0.481)S(0.481)PRVEDLK;T(0.022)S(0.022)FS(0.024)LS(0.024)RPS(0.454)S(0.454)PRVEDLK;T(0.001)S(0.001)FS(0.001)LS(0.013)RPS(0.542)S(0.443)PRVEDLK 73.315 0.00011738 22386300.0 5950.8 5335.9 5321.0 5292.2 6203.8 6712.4 5939.6 6732.700000000001 6604.1 6672.1 7275.1 True False 6554.920835252581 5785.575019342676 5682.115057772327 5619.087174541757 5768.066489948134 6657.73643988913 6165.6347282738325 6598.411016799025 6326.552643376382 6250.822467332289 6380.308820658613 1.0273673296233872 0.9067860478178946 0.890570537804436 0.8806920374054437 0.9040418970429587 1.0434818481406798 0.9663536517715736 1.0341836425588407 0.9915746747072531 0.9797053156883154 1.0 12.63941053988266 -7.247551209014493 24.59394550898082 0.9996028932805251 0.9170234491543684 0.4784406933091647 0.041730798040210126 408.1375815396924 722752.2382553567 0.005742380208600922 0.009912224721051934 5.6552107080748584e-08 7.247551209014493 -0.0825794441261567 TSFSLSRPSS(ph)PR ddPTM_A549_PD325901_60min_R1 1 TSFSLSRPSSPR 12 1 Q8N1G1;K7ESH4;A0A2R8Y7I5 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 TSFSLS(0.01)RPS(0.427)S(0.562)PR 77.77600000000001 0.00029103 10271000.0 2827.4 3142.7 2787.5 2774.9 3760.4 3142.8 2999.7 2661.9 3013.1 3179.6 2724.9 True False 3114.435566578132 3407.546358306611 2976.6765125992056 2946.2992707448543 3496.2824766757394 3117.2060787920177 3113.8552249988247 2608.8063162798467 2886.4698853374985 2978.839513366069 2389.7545745642883 1.3032449439482592 1.4258980376375643 1.2455992528613227 1.2328878045068867 1.463029933654672 1.3044042731293284 1.3030020982663284 1.0916628611352264 1.207852017968738 1.246504367047476 1.0 11.222646747119192 -9.70457075588158 0.2897534630660155 0.9341241682957178 1.3658893043200186 0.2730555394942523 0.10726345295551237 0.9377088095769069 0.17676557295693476 0.14602915887450665 0.05762908293190601 1.974373185485766e-10 9.70457075588158 0.4317651360243009 TSFSQEQSCDS(ph)AGEGSER ddPTM_A549_MK2206_60min_R1 2 TSFSQEQSCDSAGEGSER 18 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 TSFSQEQSCDS(1)AGEGSER;TSFSQEQSCDS(1)AGEGSER 248.35 2.3918999999999995e-86 24307000.0 3221.9 4007.5 4167.6 3598.5 5310.9 4098.1 4426.3 4892.5 6777.0 5801.5 5940.1 True False 3765.677952107815 4211.464632583536 4758.6283477315355 4480.132661542803 4529.67364530669 4531.758221901383 5230.5014150447705 5586.026857652855 5242.020320645191 4490.937120683262 4465.009231580114 0.8433751772502353 0.943215212814498 1.0657600244305683 1.0033870993716485 1.014482481529762 1.0149493510224272 1.1714424637804741 1.2510672583035234 1.1740222805295526 1.005806906046188 1.0 12.124447442839735 -7.590627730591116 5.944111698131798 1.10563470829243 0.9822950523010407 0.39685614246414047 0.08560932660097158 0.21958882244417285 14.263512959232003 0.01540713708566499 0.022987433098058285 2.5666832084618803e-08 7.590627730591116 -0.1233396559913893 TSFSQEQSCDS(ph)AGEGSER ddPTM_A549_PD325901_60min_R1 2 TSFSQEQSCDSAGEGSER 18 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 TSFSQEQSCDS(1)AGEGSER;TSFSQEQSCDS(1)AGEGSER 370.38 2.6122999999999986e-273 34630000.0 7082.0 7514.7 8535.900000000001 7048.299999999999 7195.5 8148.700000000001 7767.2 7982.1 6852.0 7598.7 7741.0 True False 7800.959426507153 8147.990141841942 9115.197504536522 7483.657483149284 6690.112903127407 8082.339688892873 8062.785046374928 7822.890753663687 6564.034268471859 7118.916785197742 6788.906074242044 1.1490745845055899 1.2001919090847983 1.3426607180677779 1.1023362823567722 0.9854478512393224 1.1905216540788917 1.1876412721286775 1.1523050500499203 0.9668765772701765 1.0486102926372483 1.0 12.728963410176208 -8.742190136809224 8.199933703853807 0.984319366697424 1.1648682436945932 0.4160512794683676 0.08269011935819601 0.11144088716127741 36.502847042257265 0.014288373439281628 0.01599026858898182 1.8105472502966535e-09 8.742190136809224 0.18054887699716915 TSFSVGS(ph)DDELGPIR ddPTM_A549_MK2206_60min_R1 2 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 TSFS(0.003)VGS(0.997)DDELGPIR;TSFSVGS(1)DDELGPIR 267.77 1.2012999999999998e-90 167430000.0 13905.7 14597.3 13998.599999999999 12813.8 20548.9 15138.0 14567.0 13898.9 22068.0 21533.0 21187.0 True False 16252.642198276064 15340.240219890611 15983.811975370643 15953.18157523334 17526.18403096323 16739.89311220885 17213.63534169784 15869.111638596074 17069.63323535459 16668.680344682016 15925.683168547306 1.0205302985290132 0.9632390684618839 1.0036500039720833 1.001726670460225 1.100498097662577 1.0511255897184733 1.080872648257514 0.9964477800197006 1.071830517705297 1.0466540222024574 1.0 13.959067641056778 -6.551647572782509 24.9929061948242 1.0409343097093093 0.9942394351003581 0.35725980721951633 0.03251507169771997 214.35049927610615 186216.30906759368 0.005248520984003594 0.01092580541419877 2.8077111535247917e-07 6.551647572782509 -0.046694874608951276 TSFSVGS(ph)DDELGPIR ddPTM_A549_PD325901_60min_R1 2 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 TSFSVGS(1)DDELGPIR;TSFS(0.001)VGS(0.999)DDELGPIR 138.73 4.8546e-10 386710000.0 5435.7 5685.0 5843.2 5628.0 6034.2 6338.8 5851.3 6011.3 6598.0 5900.3 6365.0 True False 5987.528262449154 6164.094901509235 6239.754690016028 5975.6287778846245 5610.378608859896 6287.178914422441 6073.974423454221 5891.399905726375 6320.709005163064 5527.754051048503 5582.145351059376 1.0726213464349947 1.1042519522246796 1.1178058430226743 1.0704896418991623 1.0050577790481867 1.1263015416159425 1.0881075359855161 1.0554006632249928 1.1323082090586416 0.9902562014082005 1.0 12.446603975264996 -10.997554508659638 1.262377767732386 0.9997820853745176 1.0897815561198962 0.49473180317693277 0.03490899203662885 0.3342176784205116 0.9441403455734726 0.02588165581390457 0.005845577489196346 1.0056468355143282e-11 10.997554508659638 0.08999947074537862 TSFSVGS(ph)DDELGPIRK ddPTM_A549_MK2206_60min_R1 3 TSFSVGSDDELGPIRK 16 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 TSFS(0.101)VGS(0.899)DDELGPIRK;TSFS(0.003)VGS(0.997)DDELGPIRK;TSFS(0.062)VGS(0.938)DDELGPIRK 118.46 5.4367e-08 37517000.0 6331.3 6319.9 6692.0 5922.4 9250.8 6221.799999999999 6142.2 6038.299999999999 9411.7 9077.5 8213.8 True False 7399.8686545765595 6641.555915524561 7641.026226849856 7373.388265866635 7890.019574460654 6880.186746303414 7258.158234075409 6894.247516518195 7279.964977396538 7026.886445402446 6174.086770652469 1.1985365495267493 1.075714702795259 1.2375961839684937 1.1942475931687344 1.277924957576657 1.1143650878065527 1.1755840991052962 1.1166424724201958 1.1791160778628322 1.1381256380787559 1.0 12.592010043402352 -11.054260965839294 0.45137207038788374 0.9321342585558944 1.1824306171717582 0.15999457325512423 0.06774090059205914 1.243442083441934 0.27073043563562726 0.14730157563956356 0.013556220945756902 8.82549420590963e-12 11.054260965839294 0.25029635861586386 TSFSVGS(ph)DDELGPIRK ddPTM_A549_PD325901_60min_R1 4 TSFSVGSDDELGPIRK 16 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 TSFS(0.035)VGS(0.964)DDELGPIRK;TSFSVGS(1)DDELGPIRK;TSFS(0.001)VGS(0.999)DDELGPIRK;TSFSVGS(1)DDELGPIRK 146.47 1.5756e-14 74225500.0 10711.1 11455.4 12607.199999999999 10991.699999999999 13057.3 12954.599999999999 11861.599999999999 13152.099999999999 13235.999999999998 11394.699999999999 13369.0 True False 11798.48298690494 12420.786760729792 13462.800405252268 11670.632345038097 12140.200293239584 12849.102032683944 12312.999678916573 12889.771047877151 12679.73694942987 10675.236697368337 11724.697753073486 1.0062931459202957 1.0593694628481007 1.1482428535714841 0.9953887589109736 1.0354382303848455 1.0959004917048467 1.050176297780373 1.0993691538443502 1.0814553361178143 0.9104914192410593 1.0 13.517263112033184 -10.806347772054657 1.063683570895105 1.0001591532023402 1.0654799361403202 0.34472396191979016 0.049972938401902325 0.5683244034312149 1.1460275302587235 0.027404466634247296 0.006900009422982877 1.561896414522862e-11 10.806347772054657 0.06532078293798005 TSFVEDTETLS(ph)VSGIPNAR ddPTM_A549_PD325901_60min_R1 2 TSFVEDTETLSVSGIPNAR 19 0 A0A0A0MTQ1;Q96GE4-2;Q96GE4 A0A0A0MTQ1 CEP95 Centrosomal protein of 95 kDa 1 TSFVEDTET(0.01)LS(0.99)VSGIPNAR;TSFVEDT(0.013)ET(0.114)LS(0.871)VS(0.002)GIPNAR 203.19 7.875399999999999e-55 6731600.0 2782.8 2359.7 2599.6 3053.6 3300.7 2601.4 3015.8999999999996 2804.3 2924.7 3317.4 3342.3 True False 3065.307807410914 2558.56020036787 2776.0244886647138 3242.213936771228 3068.8702187968343 2580.2150608914208 3130.6717248638042 2748.3660365692076 2801.78502991822 3107.9387978489726 2931.218288585347 1.0457453200765476 0.8728658013397809 0.9470548472882474 1.1060977442031354 1.046960654806067 0.8802534669421272 1.0680445523471118 0.9376190259428318 0.9558431867148339 1.0602890988882694 1.0 11.51728469456366 TSGAPGS(ph)PQT(ph)PPER ddPTM_A549_MK2206_60min_R1 2 TSGAPGSPQTPPER 14 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 2 T(0.033)S(0.044)GAPGS(0.923)PQT(1)PPER;T(0.004)S(0.004)GAPGS(0.992)PQT(1)PPER 100.4 4.8241e-05 20065800.0 2225.8999999999996 2490.4 2447.92 2017.02 2964.8 2152.35 2425.28 2132.9700000000003 3447.6 3502.5 3458.2 True False 2601.5775019698895 2617.150722641555 2795.071865097174 2511.189990547467 2528.6818474468128 2380.1102483857 2865.92198266719 2435.325029446667 2666.7241046859017 2711.282817408106 2599.433498535436 1.0008247964164736 1.0068158020261344 1.0752619240584398 0.9660527926420558 0.9727818960829405 0.9156265200578102 1.1025179079525975 0.9368676024290561 1.0258866426813298 1.0430283440356094 1.0 11.343981531798862 -12.82794603219398 15.268503337019336 0.23648959899906885 1.0054725256404111 0.0 0.05357274507480967 0.0 0.0 0.0 0.006192016460979383 1.4861203042448268e-13 12.82794603219398 0.7689829266413423 TSGAPGS(ph)PQT(ph)PPER ddPTM_A549_PD325901_60min_R1 2 TSGAPGSPQTPPER 14 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 2 T(0.002)S(0.003)GAPGS(0.995)PQT(1)PPER;T(0.01)S(0.012)GAPGS(0.978)PQT(1)PPER 100.4 4.8241e-05 24129000.0 2143.06 2233.6 2133.0 2398.4 2764.5 1918.58 2179.8 2500.5 2488.4 2473.1 2765.6 True False 2360.621873562612 2421.833310819881 2277.75820677098 2546.5437208383937 2570.3310570072576 1902.9557205831718 2262.75348183233 2450.625565895699 2383.8212016440975 2316.9480439381136 2425.4487325828436 0.9732722204558009 0.9985093802584264 0.9391079581160271 1.0499268389509915 1.059734234938922 0.7845788265978838 0.932921587430438 1.0103802784922378 0.9828371837427307 0.9552657258068744 1.0 11.24403596985131 -8.278255427199623 24.332343611288096 0.9930552528418743 0.9633080889780422 0.025310252953225643 0.06972230900982014 1758.1326599298757 2543962.7241632743 0.011463989837311875 0.013877442780670277 5.269198661127902e-09 8.278255427199623 -0.029747163863832138 TSGAPGS(ph)PQTPPER ddPTM_A549_MK2206_60min_R1 2 TSGAPGSPQTPPER 14 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 1 TS(0.001)GAPGS(0.969)PQT(0.029)PPER;TSGAPGS(0.997)PQT(0.003)PPER 136.33 4.0533000000000005e-09 23851700.0 2484.9700000000003 2743.3900000000003 2330.48 2355.73 2872.17 2870.81 2395.37 2505.49 3394.1400000000003 3416.24 3871.13 True False 2904.3721843165094 2883.0168330338956 2660.977107165128 2932.8839557527367 2449.6775977405923 3174.5972087105492 2830.577722828499 2860.6508802413196 2625.372709327826 2644.5090113182778 2909.821583247206 0.9981272394974074 0.9907881808398034 0.9144811910411426 1.007925699856757 0.8418652235739081 1.0909937664177567 0.9727667631325096 0.9831018151459944 0.90224525257595 0.9088217045827073 1.0 11.50671498114423 -11.333899944643715 1.9581378401647436 1.000250702445246 0.9557972708226649 0.0 0.06781219400804615 0.8479979965237903 5.874231328176111 0.04677732605126922 0.008998519510671587 4.635537037055872e-12 11.333899944643715 -0.044453431622581197 TSGAPGS(ph)PQTPPER ddPTM_A549_PD325901_60min_R1 4 TSGAPGSPQTPPER 14 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 1 T(0.045)S(0.006)GAPGS(0.947)PQT(0.002)PPER;TS(0.001)GAPGS(0.998)PQT(0.001)PPER;TSGAPGS(1)PQTPPER;TSGAPGS(0.71)PQT(0.29)PPER 144.55 4.8163e-13 83107300.0 9341.8 9016.5 8319.869999999999 9420.57 11176.900000000001 9848.8 10555.600000000002 10299.0 10579.699999999999 11138.4 10915.3 True False 10290.172658930316 9776.352098409496 8884.506409642594 10002.45721323321 10391.87310221176 9768.594638159228 10957.299134245952 10093.578365590793 10135.07200089779 10435.119523108766 9572.787297787643 1.0749400711440091 1.0212649455471448 0.9281002630964007 1.0448845150403443 1.0855639824582142 1.0204545796621678 1.1446299592155653 1.0544032841849007 1.058737824796347 1.0900816239299933 1.0 13.224723338444623 -5.247408574255786 21.929631026548947 1.0348940951832117 1.0749402195314401 0.0 0.05370015728682423 1189.2030157810962 1858493.8433465166 0.007203398453763853 0.17285965916206975 5.657068346435579e-06 5.247408574255786 0.04004612434822841 TSGAPGSPQT(ph)PPER ddPTM_A549_MK2206_60min_R1 2 TSGAPGSPQTPPER 14 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 1 T(0.051)S(0.006)GAPGS(0.199)PQT(0.745)PPER;TSGAPGS(0.367)PQT(0.633)PPER 120.9 2.2467e-06 28087400.0 2766.1499999999996 3076.08 2632.6000000000004 2306.87 3526.38 2748.89 2738.12 2530.35 3751.82 4426.4 4471.7 True False 3233.008494125527 3232.6393330000155 3005.9422661095214 2872.0532535593284 3007.6541733673375 3039.7757152344984 3235.600961200637 2889.034861371878 2902.0387604254156 3426.473165731686 3361.253477358428 0.9618460838800864 0.9617362554699419 0.8942920509737511 0.8544589906431107 0.894801357180304 0.9043577747737801 0.9626173637292775 0.8595111558329539 0.8633799206080988 1.0194033829381155 1.0 11.71478362728985 -10.937758728143464 1.2074742355439392 0.9997862911670354 0.9022161802173602 0.4957119335631014 0.03948162497920313 0.3620045902507606 0.9413526397381666 0.029008108865447215 0.0068676772934146355 1.1540942356330033e-11 10.937758728143464 -0.09757011094967527 TSGGDHAPDS(ph)PSGENSPAPQGR ddPTM_A549_MK2206_60min_R1 2 TSGGDHAPDSPSGENSPAPQGR 22 0 E9PL60;E9PII7;H0YDE3;H0YDU2;E9PRI1;Q96NY9 E9PL60 MUS81 Crossover junction endonuclease MUS81 1 TSGGDHAPDS(0.972)PS(0.027)GENS(0.001)PAPQGR;T(0.006)S(0.006)GGDHAPDS(0.933)PS(0.049)GENS(0.007)PAPQGR 68.689 0.00021064 5733600.0 518.39 432.53 323.76 566.64 542.76 279.69 131.58 329.36 420.22 632.4000000000001 858.7 True False 605.8815585813253 454.54392951499835 369.6740363426343 705.4668254374361 462.92072298982447 309.2866101568038 155.48638280089259 376.04778862269717 325.0408409534489 489.5404007791251 645.4610910856459 0.9386802193796856 0.7042158478529965 0.572728614393865 1.0929656879098049 0.7171938469772142 0.4791715789352898 0.2408919529748404 0.5826033417292377 0.5035792946198199 0.7584351830653852 1.0 9.334186321109447 -5.2619269911472895 8.683540386410698 0.7018232473720157 0.9399360869063599 0.08634086294758725 0.22913971591334586 0.20999445847491652 273.4519313925234 0.036968424156791795 0.29680329127038757 5.471079289828923e-06 5.2619269911472895 0.23811283953434415 TSGGDHAPDS(ph)PSGENSPAPQGR ddPTM_A549_PD325901_60min_R1 2 TSGGDHAPDSPSGENSPAPQGR 22 0 E9PL60;E9PII7;H0YDE3;H0YDU2;E9PRI1;Q96NY9 E9PL60 MUS81 Crossover junction endonuclease MUS81 1 TSGGDHAPDS(0.99)PS(0.009)GENS(0.001)PAPQGR;TSGGDHAPDS(0.994)PS(0.006)GENSPAPQGR 110.03 7.592300000000001e-11 9299900.0 760.27 697.85 708.5 1224.14 834.44 1265.43 673.4 905.4 832.45 1009.51 1153.58 True False 837.4520507188071 756.6602686047884 756.5830705566045 1299.7523475763476 775.831813061724 1255.1247576319788 699.0266054986193 887.3410867274404 797.4650214228545 945.7693663159457 1011.6969731461229 0.8277696513359549 0.7479119624641808 0.7478356569594368 1.2847249542859114 0.766861850588603 1.2406133367473235 0.6909446445459084 0.8770818834893149 0.7882449415094512 0.9348346307440667 1.0 9.982561518562969 -11.13076875319556 1.5168303255298492 0.9995347201269882 0.8761860808563535 0.021598433892027646 0.18890143712354127 1.0434170602562884 4.325373348898419 0.12718438376613397 0.027823355164010927 7.399991941747791e-12 11.13076875319556 -0.12334863927063466 TSGS(ph)KER ddPTM_A549_PD325901_60min_R1 1 TSGSKER 7 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 TSGS(0.999)KER 60.518 0.008009100000000002 16515000.0 4504.7 4100.6 3633.1 3860.4 3679.6 2329.8 2592.2 2013.5 2531.3 4847.5 6196.4 True False 4962.01382781513 4446.171953056951 3879.6640136050833 4098.848140395483 3421.157589930873 2310.826881242728 2690.8475895062666 1973.3391629398066 2424.918263832869 4541.428022720473 5434.282082215914 0.9130946374781839 0.818170990351674 0.7139239286642053 0.754257522591487 0.6295509762231265 0.4252313086221782 0.49516155930003386 0.36312784892004474 0.44622605656938413 0.8356997215110766 1.0 12.407873739447528 -5.6262864613694665 1.2600195279711786 0.6586570022101669 0.9449377585065297 0.2014172376085187 0.18328759415572615 1.5853536123164373 3.245669563204576 0.037039902886969775 0.49253082303672346 2.364359647443169e-06 5.6262864613694665 0.28628075629636285 TSGVPGNRPGS(ph)VIR ddPTM_A549_MK2206_60min_R1 2 TSGVPGNRPGSVIR 14 1 A0A087X2D8;O60271-4;O60271-2;O60271-9;O60271 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 T(0.006)S(0.005)GVPGNRPGS(0.989)VIR;T(0.014)S(0.06)GVPGNRPGS(0.926)VIR 53.773 0.0053676999999999996 23807000.0 5265.6 5855.6 5051.9 4872.0 7454.0 5486.5 5167.7 5417.2 8171.6 7881.700000000001 8604.9 True False 6154.30454844003 6153.625028710201 5768.335384850985 6065.640218712391 6357.526474254091 6067.07778835605 6106.604198207724 6185.104689479219 6320.745647363767 6101.218495921618 6468.065846841588 0.9514907074493111 0.9513856498098375 0.8918176656577659 0.9377826946017094 0.9829099803241067 0.9380049510965719 0.9441159602896794 0.9562525855390694 0.9772234539712117 0.9432832998910943 1.0 12.659118650614705 -8.85732182892178 0.4841637593236877 0.9995572708878269 0.935753903507746 0.08193719504948993 0.025955479745153633 0.442322625360733 0.2497110407306921 0.00903320345496495 0.00798823714210137 1.3889230043749958e-09 8.85732182892178 -0.06380336738008086 TSGVPGNRPGS(ph)VIR ddPTM_A549_PD325901_60min_R1 1 TSGVPGNRPGSVIR 14 1 A0A087X2D8;O60271-4;O60271-2;O60271-9;O60271 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 T(0.007)S(0.006)GVPGNRPGS(0.987)VIR 45.257 0.013377000000000002 20336000.0 2530.4 2670.5 2904.0 3403.1 3675.9 2845.8 2915.8 3191.5 2751.9 2760.6 3133.0 True False 2787.2843452179736 2895.5524071205646 3101.0829031706153 3613.301757999139 3417.7174651665664 2822.624748321982 3026.762364586983 3127.843028816684 2636.247212990031 2586.2952448730566 2747.6608617233333 1.0144208057284727 1.0538245266937616 1.1286265151462744 1.3150464849336887 1.243864376705855 1.0272828017616524 1.101577857279154 1.138365754081783 0.9594514554960675 0.9412716397797841 1.0 11.423988230847328 -8.758114511357904 24.979911260281725 0.9808520716668867 1.131308343552264 0.4103869838872619 0.08541261710285802 67.1598179570175 504574.25779390155 0.015458936492956737 0.017182174797207038 1.7453618889295152e-09 8.758114511357904 0.15045627188537725 TSIAIDTIINQK ddPTM_A549_PD325901_60min_R1 2 TSIAIDTIINQK 12 0 P25705-2;P25705;P25705-3;K7EK77;K7ENJ4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ; 173.71 7.254199999999999e-37 2457000.0 4913.1 5116.7 4222.7 4938.8 5718.5 5067.7 5794.6 5240.6 5350.2 5519.0 5892.1 False True 5411.874295166943 5547.902266060209 4509.277815157906 5243.858459171384 5316.8522877540245 5026.430331390582 6015.11667392679 5136.072121828833 5125.349699821673 5170.529398121568 5167.4090530992835 1.0473090555741924 1.0736332674752571 0.872638060742134 1.0147945334473276 1.028920341532689 0.9727177159268733 1.1640488709364072 0.9939356588672508 0.9918606495353055 1.0006038509802921 1.0 12.335225376963553 TSIDAYDNFDNIS(ph)LAQR ddPTM_A549_PD325901_60min_R1 2 TSIDAYDNFDNISLAQR 17 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 1 TSIDAYDNFDNIS(1)LAQR;TSIDAYDNFDNIS(1)LAQR 334.04 3.997699999999998e-195 28898000.0 7481.799999999999 6900.1 7534.5 6832.3 7747.3 7935.099999999999 7073.7 8149.900000000001 8241.3 8647.6 7939.299999999999 True False 8241.346828189944 7481.595642903056 8045.836478629129 7254.315653720879 7203.156374734063 7870.479176474022 7342.893524377167 7987.343851027136 7894.946820892749 8101.589060191357 6962.816431369317 1.1836225914359184 1.0745070930200749 1.155543386492357 1.041865131046437 1.03451763316378 1.1303585630974624 1.054586688699059 1.1471426727612772 1.1338726072575949 1.1635505746915242 1.0 12.765455273160544 -10.843718319029264 1.0699907570245053 0.9995034947524095 1.1050004566297615 0.0 0.06713410056236456 0.4112980386501129 0.8296880235496512 0.032649144766235184 0.007848679242174377 1.4331171096385165e-11 10.843718319029264 0.10549696187735202 TSIS(ph)VER ddPTM_A549_MK2206_60min_R1 3 TSISVER 7 0 P30411-2;P30411 P30411-2 BDKRB2 B2 bradykinin receptor 1 T(0.004)S(0.014)IS(0.982)VER;TSIS(1)VER;TS(0.002)IS(0.998)VER 85.73100000000001 0.013471 98301300.0 5313.31 6007.78 4667.360000000001 5175.54 7949.91 5644.88 6190.79 5206.59 8572.4 8833.2 9293.7 True False 6210.066830042519 6313.5503406968655 5329.261830566339 6443.547532338823 6780.488770182099 6242.217454831918 7315.576408116258 5944.64007701314 6630.765087309845 6837.773985076166 6985.81779692869 0.8889534497697278 0.9037668207539873 0.7628687127954218 0.922375549956617 0.9706077323063216 0.8935557205022302 1.0472040097198851 0.8509583630461558 0.9491752118449261 0.9788079483095579 1.0 12.770213299725903 -2.00000010952498 0.08947998232170538 1.0599690126940766 0.49230718564919124 0.27668120762899373 0.06314063482312977 113.15785712084893 0.7069683958156266 0.57870900032498 7.9075336096125985 0.009999997478094451 2.00000010952498 -0.5676618270448854 TSIS(ph)VER ddPTM_A549_PD325901_60min_R1 2 TSISVER 7 0 P30411-2;P30411 P30411-2 BDKRB2 B2 bradykinin receptor 1 TS(0.001)IS(0.999)VER;TS(0.002)IS(0.997)VER 73.233 0.019163999999999997 133520000.0 10976.0 10241.7 11893.599999999999 11675.2 11796.9 11695.6 11353.9 12802.2 12637.2 14279.599999999999 13676.4 True False 12090.275439895868 11104.804002249279 12700.771218026865 12396.350587696974 10968.326441095636 11600.354911263827 11785.97887759247 12546.850077868392 12106.102431046778 13377.983619028215 11994.289501842633 1.0080026364244825 0.9258409179254256 1.0589015060938538 1.033521042308723 0.9144623730660009 0.9671564880505604 0.9826325165639731 1.046068637574645 1.0093221802914603 1.1153627413256124 1.0 13.550060079696246 TSISDPPES(ph)PPLLPPREPVR ddPTM_A549_MK2206_60min_R1 2 TSISDPPESPPLLPPREPVR 20 1 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 TSIS(0.001)DPPES(0.999)PPLLPPREPVR;TSIS(0.001)DPPES(0.999)PPLLPPREPVR 121.35 5.4087e-15 28785000.0 10324.8 12589.8 12052.3 11335.5 14783.099999999999 11402.5 11373.4 11743.400000000001 18174.7 16321.0 18054.0 True False 12067.373822875561 13230.56704461638 13761.497369076873 14112.698008869937 12608.525573054158 12609.104981633078 13439.799560325831 13408.062912654186 14058.159469032049 12634.074764573223 13570.693534948468 0.8892230741043983 0.9749366906373529 1.0140599913804722 1.0399393349002872 0.9290995733256779 0.9291422689018051 0.9903546584199586 0.9880160419306897 1.0359204879859836 0.9309822472990654 1.0 13.728206831615239 -8.382813201744032 2.445855421879809 1.016694099334787 0.9681182509551405 0.0 0.04780983835782333 0.3463541749173548 4.0503950321550635 0.007228901423250821 0.008879724423762605 4.141777821969413e-09 8.382813201744032 -0.04857584837964657 TSISDPPES(ph)PPLLPPREPVR ddPTM_A549_PD325901_60min_R1 2 TSISDPPESPPLLPPREPVR 20 1 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 TSIS(0.007)DPPES(0.992)PPLLPPREPVR;TSISDPPES(1)PPLLPPREPVR 123.43 3.4659999999999995e-15 39017000.0 10187.3 11280.3 11644.9 11448.0 14323.099999999999 12663.099999999999 13223.5 13227.7 14436.4 14800.1 16327.5 True False 11221.50719650612 12230.93046921629 12435.192940472272 12155.116959705598 13317.094868012526 12559.975912037418 13726.727528676844 12963.863146570095 13829.688311933323 13865.619160199134 14319.32100855018 0.7836619620305788 0.8541557565413266 0.8684205719703554 0.8488612660088898 0.9300088223499413 0.8771348798268966 0.9586158114955664 0.9053406330390436 0.9658061512606294 0.9683154076872683 1.0 13.805675464273 -2.000000000018547 0.1403818121347557 1.031800590729883 0.21144426996737423 0.8138246539769556 0.02691546256925415 14.893691187695369 0.133115249475402 0.04919281842523325 2.472774697846266 0.00999999999957294 2.000000000018547 -0.8203563207625089 TSKAET(ph)PTESVSEPEVATK ddPTM_A549_MK2206_60min_R1 1 TSKAETPTESVSEPEVATK 19 1 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 T(0.138)S(0.138)KAET(0.631)PT(0.091)ES(0.002)VSEPEVATK 129.9 7.044100000000001e-17 59764000.0 3043.8 3524.0 2592.7 2762.5 4442.8 3489.1 2790.0 3203.9 4900.5 4509.7 4265.1 True False 3557.519026234762 3703.35654777901 2960.3838461377186 3439.3126240133392 3789.2700053415706 3858.3142461228636 3296.906885655043 3658.062636532243 3790.5445744904464 3490.955637877327 3205.9579592283526 1.1096586641114368 1.1551481943544815 0.923400706991884 1.072787811865491 1.1819462555440423 1.203482483298542 1.0283687208576437 1.1410201515595382 1.1823438181961683 1.0888962619826652 1.0 11.646539791748296 TSKAET(ph)PTESVSEPEVATK ddPTM_A549_PD325901_60min_R1 2 TSKAETPTESVSEPEVATK 19 1 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 TSKAET(0.998)PT(0.002)ESVSEPEVATK;T(0.008)S(0.008)KAET(0.98)PT(0.004)ESVSEPEVATK 231.17 1.4131999999999996e-75 211980000.0 19076.3 19658.7 17799.6 18947.0 22010.8 18236.9 20205.5 21326.1 21424.1 21033.2 22916.3 True False 21012.911932770166 21315.40764121365 19007.587893689975 20117.31315824091 20464.837341137754 18088.38473282492 20974.43135937386 20900.734205498185 20523.719581314643 19705.160162451637 20097.74037839465 1.0455360422189222 1.0605872719964085 0.9457574600835921 1.0009738796241643 1.0182655838831383 0.9000208178761323 1.043621370585604 1.0399544332837918 1.02119537793303 0.9804664500311168 1.0 14.294745685523907 -12.791381022684684 15.275412260823805 0.23163893846225103 1.0081584987880872 0.0 0.045884483622490674 0.0 0.0 0.0 0.005570381310037485 1.6166610584607427e-13 12.791381022684684 0.7765195603258361 TSKAET(ph)PTESVSEPEVATKQELQEEEEQTKPPR ddPTM_A549_MK2206_60min_R1 1 TSKAETPTESVSEPEVATKQELQEEEEQTKPPR 33 3 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 T(0.045)S(0.045)KAET(0.81)PT(0.045)ES(0.045)VS(0.011)EPEVATKQELQEEEEQTKPPR 66.381 0.00017575 10742000.0 1343.5 1618.2 1376.6 1274.1 1835.5 1424.8 1118.0 1258.9 1930.9 2092.1 2413.2 True False 1570.2499545786184 1700.5594681089653 1571.8225797790647 1586.2545571965231 1565.500381472147 1575.5713902943044 1321.1261283735976 1437.3529302195564 1493.5542330136943 1619.493156973446 1813.9358390682196 0.8656590386268692 0.9374970335127767 0.8665260071086509 0.8744821746348804 0.8630406587458526 0.8685926791675509 0.7283202084216122 0.7923945815844811 0.8233776525309194 0.8928061963896945 1.0 10.824907711699892 -10.70073855557082 0.9999646095990242 0.9984694004226997 0.8466397699742401 0.2386569942643475 0.058855681802368616 0.34618884805298067 0.6248239402308446 0.036272453738795764 0.009879662533765992 1.9918720812300782e-11 10.70073855557082 -0.15182963044845965 TSKAET(ph)PTESVSEPEVATKQELQEEEEQTKPPR ddPTM_A549_PD325901_60min_R1 1 TSKAETPTESVSEPEVATKQELQEEEEQTKPPR 33 3 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 T(0.288)S(0.288)KAET(0.402)PT(0.021)ES(0.001)VSEPEVATKQELQEEEEQTKPPR 66.817 0.00016506 17467000.0 1595.4 2087.4 2481.3 2255.6 2922.3 2983.7 2486.3 2520.1 2326.8 2367.5 2418.2 True False 1757.363833528596 2263.312523730938 2649.6959392690264 2394.9232891607244 2717.0477293877047 2959.4017364425836 2580.9175070555634 2469.834628519795 2229.012687664962 2218.015645959921 2120.776730232801 0.828641604972574 1.0672092405891735 1.249398817657795 1.1292670534431173 1.281156894384375 1.395432953528175 1.2169680430114167 1.1645896493067789 1.0510359982214061 1.045850614230592 1.0 11.050377030405247 -8.819510495067316 2.8698474788681985 1.0209310449036049 1.179174806301062 0.16026701644388675 0.13572157977113972 0.31055793956936967 4.976926884207615 0.0255380406044447 0.027231179627127726 1.5152681856102237e-09 8.819510495067316 0.15824376139745722 TSKAETPT(ph)ESVSEPEVATKQELQEEEEQTKPPR ddPTM_A549_MK2206_60min_R1 1 TSKAETPTESVSEPEVATKQELQEEEEQTKPPR 33 3 P18858;P18858-2;M0R0Q7;P18858-3;B4E135 P18858 LIG1 DNA ligase 1;DNA ligase 1 T(0.236)S(0.236)KAET(0.236)PT(0.273)ES(0.017)VS(0.001)EPEVATKQELQEEEEQTKPPR 59.364 0.00041537 14799000.0 1228.6 2085.0 2049.9 1740.1 1965.9 1621.6 1669.4 1639.1 2356.5 2662.3 2625.2 True False 1435.9576436139114 2191.1175942449586 2340.606644115289 2166.424578116058 1676.718714211982 1793.196635669037 1972.7083709363887 1871.447444533224 1822.7565125572357 2060.884580952348 1973.2903881658742 0.7276970750101304 1.11038781082877 1.1861440455759915 1.097874185729804 0.8497070295722929 0.9087342878793273 0.9997050524175378 0.9483892769946998 0.9237142812272268 1.0443899150939921 1.0 10.946387562436554 -6.738713299151548 24.999594670126434 0.9539094500231484 1.0473457889489932 0.08301597796297111 0.11840499307414087 385.0330871642142 423549.5892406458 0.01590945023269563 0.033099687415784375 1.8251001502374984e-07 6.738713299151548 0.0934363389258448 TSKEPPSS(ph)PLQPQK ddPTM_A549_MK2206_60min_R1 2 TSKEPPSSPLQPQK 14 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 TSKEPPS(0.033)S(0.967)PLQPQK;TSKEPPS(0.034)S(0.966)PLQPQK 151.04 4.1999e-14 130754000.0 11908.7 12687.1 12785.8 10968.099999999999 16036.900000000001 11252.0 11068.5 11145.1 16686.7 15894.3 17822.4 True False 13918.597420238488 13332.819199014486 14599.01869863372 13655.28499237672 13677.893253952965 12442.679171526892 13079.503177015344 12724.95205543727 12907.189093184317 12303.766590929228 13396.606206783286 1.0389644366190964 0.9952385696209759 1.0897550075959983 1.0193092774095618 1.020996888527428 0.9287933809106533 0.9763295998349657 0.9498638579817381 0.9634670821815188 0.9184241442208919 1.0 13.70957994524928 -7.057193698711569 8.805808084692382 0.9756330308563058 1.0347475363976404 0.5433165062194802 0.032636483819593436 0.2617341132186129 38.616018744034314 0.004262360631622897 0.007411080378690962 8.766097591816175e-08 7.057193698711569 0.05911450554133457 TSKEPPSS(ph)PLQPQK ddPTM_A549_PD325901_60min_R1 2 TSKEPPSSPLQPQK 14 1 Q92615;H0Y4V9;A0A087X183 Q92615 LARP4B La-related protein 4B 1 TSKEPPS(0.065)S(0.935)PLQPQK;TSKEPPS(0.108)S(0.892)PLQPQK 145.8 1.1654e-13 155820000.0 14427.7 14175.8 16146.1 15356.7 18049.4 18184.2 16708.0 17962.0 18837.0 20612.8 22974.0 True False 15892.389482888628 15370.444415974434 17241.871440386727 16305.24848140383 16781.672411049647 18036.11390415229 17343.83208296842 17603.7338190836 18045.34639743203 19311.304290197553 20148.343644185086 0.7887690305240179 0.7628639201024557 0.8557463454502285 0.8092599952309036 0.8329058064230963 0.8951660852458015 0.8608068429473078 0.8737062524821552 0.8956243111646554 0.958456170454036 1.0 14.298373622047592 -14.999999767196185 0.0422660588778221 1.7955624398489993 0.4015591902482191 0.8595337313632174 0.025099720513859537 96.25229057539221 0.31226668988212014 9.422133540419123 2.753842589735536 1.0000005360507384e-15 14.999999767196185 -1.3940032496007801 TSLAGDTSNSS(ph)SPASTGAK ddPTM_A549_MK2206_60min_R1 1 TSLAGDTSNSSSPASTGAK 19 0 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 TSLAGDT(0.002)S(0.012)NS(0.077)S(0.833)S(0.077)PASTGAK 127.75 2.1368e-16 4414100.0 739.19 1122.9 882.26 617.02 1274.1 1001.1 986.13 835.6 1250.8 1128.1 1467.0 True False 863.9472005396126 1180.050813706313 1007.3777344441942 768.1899276990806 1086.6815777900647 1107.0357375236022 1165.2970563265255 954.0488589176758 967.4957971171616 873.2614265005236 1102.70341285972 0.7834810253276321 1.0701434310845221 0.9135527492670845 0.6966423779417518 0.9854704040245014 1.0039288213071245 1.0567638067832554 0.865190809959926 0.8773853293952226 0.791927744411194 1.0 10.106829095234135 TSLAGDTSNSS(ph)SPASTGAK ddPTM_A549_PD325901_60min_R1 1 TSLAGDTSNSSSPASTGAK 19 0 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 TSLAGDTSNS(0.002)S(0.635)S(0.364)PASTGAK 199.08 1.4944999999999998e-54 3883500.0 1325.6 1446.4 1496.4 1082.1 1287.8 1222.5 1383.0 1420.8 1206.8 1216.4 1453.9 True False 1460.1739361448563 1568.2932041412423 1597.9547025841964 1148.9388593725926 1197.3493706688166 1212.5443653185837 1435.630821806639 1392.4610294039621 1156.0823927600454 1139.596296407878 1275.0795170314564 1.145163040140683 1.229957177723648 1.2532196472769273 0.9010723206090433 0.9390389812365544 0.950955880886188 1.1259147391442426 1.0920581899439374 0.9066747424910009 0.8937452772051424 1.0 10.316371504491164 -6.257112646490539 24.999856289242004 0.9724148830324995 1.2114976890621822 0.6556146984929729 0.07525370091618648 174.50031196348428 1008257.2734052454 0.011003982579629942 0.028037537644267328 5.532066009114949e-07 6.257112646490539 0.2390828060296828 TSLAGDTSNSSS(ph)PASTGAK ddPTM_A549_PD325901_60min_R1 1 TSLAGDTSNSSSPASTGAK 19 0 H3BPE1;H3BQK9;H0Y6T5;H0Y4F5;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 H3BPE1;Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 TSLAGDTSNSS(0.161)S(0.839)PASTGAK 250.19 5.1191e-97 5707900.0 1491.1 1355.0 1608.2 1161.7 2268.9 1524.9 1482.9 1492.0 1458.8 1499.9 1656.3 True False 1642.4753743101971 1469.190605372914 1717.3421228922111 1233.455570587875 2109.540291280074 1512.4817199789836 1539.332570974017 1462.2408895486421 1397.4917091136515 1405.1960580254647 1452.585600150768 1.1307253590698683 1.011431343681517 1.1822656941621639 0.8491448424518673 1.4522657329531004 1.0412341412595574 1.0597190078259384 1.006646967584473 0.9620718455205682 0.9673757318533348 1.0 10.504407468102007 -8.045111385807623 2.076499212351412 0.9828538973268672 1.112810764725778 0.1624498440570542 0.13675133082393873 0.4227621957515375 3.628454862595199 0.021015733652091265 0.028974456864411816 9.013399365277354e-09 8.045111385807623 0.12995686739891066 TSLDIEEYS(ph)DTEVQK ddPTM_A549_MK2206_60min_R1 2 TSLDIEEYSDTEVQK 15 0 P51580 P51580 TPMT Thiopurine S-methyltransferase 1 TSLDIEEYS(0.716)DT(0.284)EVQK;TSLDIEEYS(0.996)DT(0.004)EVQK 256.52 6.727999999999999e-77 16237000.0 6306.5 6231.6 5897.9 5613.9 8328.1 6695.1 5917.5 6259.299999999999 8904.0 8067.9 8405.5 True False 7370.883020878343 6548.761822684354 6734.31090605764 6989.305752017546 7103.047522167358 7403.571038152299 6992.633152639325 7146.574943302307 6887.258216766241 6245.355786600102 6318.182370001626 1.1666144769538278 1.0364945864458592 1.0658620647026222 1.1062209576606046 1.1242232506443985 1.1717881195237474 1.1067475965619407 1.1311124821647824 1.0900695506142013 0.9884734914035878 1.0 12.62529386475095 -10.149360142663284 0.7437391556509575 1.0030769779980666 1.1108069893142156 0.579530652056356 0.03802006054299524 0.3830086239354911 0.4121080008480079 0.02134906250495975 0.008039403238669352 7.089895880328956e-11 10.149360142663284 0.10773001131614901 TSLDIEEYS(ph)DTEVQK ddPTM_A549_PD325901_60min_R1 2 TSLDIEEYSDTEVQK 15 0 P51580 P51580 TPMT Thiopurine S-methyltransferase 1 TSLDIEEYS(1)DTEVQK;TSLDIEEYS(0.993)DT(0.007)EVQK 316.39 3.2193e-163 36820000.0 11876.2 12486.0 12179.7 13580.1 15612.599999999999 12293.7 12247.2 13848.5 13743.7 13272.2 14225.3 True False 13081.863081203644 13538.239039620812 13006.287684485935 14418.911934355183 14516.024836546017 12193.584183163242 12713.273897924988 13572.280803561915 13166.100084004178 12434.19102695217 12475.67828160642 1.0485893260401686 1.0851705802305742 1.0425315073779853 1.1557617637201962 1.1635459418625593 0.9773884760350798 1.0190447053022254 1.0878992305831 1.0553414240743675 0.9966745491733771 1.0 13.606830634142709 -7.268649102310458 24.989438369498995 1.0282518093016775 1.0983478452577407 0.4161371086423893 0.04479343347068276 486.9665525794791 1687859.3271308348 0.007058383916836843 0.011419892643761344 5.3870486505903075e-08 7.268649102310458 0.07009603595606317 TSLEASMEAS(ph)PK ddPTM_A549_MK2206_60min_R1 3 TSLEASMEASPK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 TSLEAS(0.003)MEAS(0.997)PK;TSLEASMEAS(1)PK;TSLEASMEAS(1)PK 202.32 9.271700000000001e-25 55564000.0 14108.400000000001 16023.8 13594.2 13630.8 19653.7 15112.0 14459.6 15384.1 21508.2 22303.6 23383.300000000003 True False 16489.55300273687 16839.342976816475 15522.06197445341 16970.346611909856 16762.666765098966 16711.141809466255 17086.722151905957 17564.843286830313 16636.627041537686 17265.20126947706 17576.581263750984 0.9381547387001848 0.9580556493966804 0.8831104150194039 0.965508955197596 0.9536932417949449 0.9507617868743584 0.9721300118325463 0.9993321808863435 0.9465223522078318 0.9822843822924713 1.0 14.101366865646801 -8.03656110296349 0.0077075629795507715 1.91517435702289 3.9437862540065185e-06 0.390109541748366 0.024140739534931926 1573.626503875119 7.197688011394482 884.7946207826145 903.1244627629419 9.19261130469201e-09 8.03656110296349 -1.915170413236636 TSLEASMEAS(ph)PK ddPTM_A549_PD325901_60min_R1 4 TSLEASMEASPK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 TSLEAS(0.001)MEAS(0.999)PK;TSLEASMEAS(1)PK;TSLEASMEAS(1)PK;TSLEAS(0.002)MEAS(0.998)PK 163.09 3.565e-14 164467000.0 44916.9 44925.2 43560.2 45626.899999999994 53339.3 47853.4 45486.7 46892.0 46840.0 49761.8 51946.7 True False 49476.83062192585 48711.20426900308 46516.457120761945 48445.169986791705 49592.93157859544 47463.69777614422 47217.721259777325 45956.70227393762 44871.4776904877 46619.83145559808 45557.58521726251 1.0860283833300777 1.0692226999455978 1.021047469898297 1.0633831831902065 1.0885768273732794 1.0418396310908826 1.0364403871407513 1.00876071580115 0.9849397740573214 1.023316561518126 1.0 15.47540365847853 -8.09160333744154 1.5770039680216088 0.9928673674114165 1.0625558455755715 0.6418697177370356 0.019860785891102607 0.13475584646849917 0.6627638767597388 0.0031605539013960745 0.0043593928706191385 8.098352239261941e-09 8.09160333744154 0.06968847816415502 TSLGFWCVK ddPTM_A549_PD325901_60min_R1 1 TSLGFWCVK 9 0 A5PLN9-7 A5PLN9-7 0 57.281000000000006 0.038261 6814300.0 4913.4 4922.6 5077.5 5475.0 6373.0 5930.2 5217.5 5675.0 5783.3 6022.6 6795.3 False True 5412.204750946091 5337.444777866202 5422.089683487881 5813.178315372835 5925.382465656449 5881.906417351544 5416.054817625552 5561.807673048624 5540.248012967497 5642.332008176657 5959.521178955817 0.9081610062999016 0.895616378831527 0.9098196852851691 0.9754438554393017 0.9942715677528057 0.9869763426836463 0.9088070425440643 0.9332641844932787 0.9296465012207941 0.9467760645101465 1.0 12.54098070587029 TSLGSGFGS(ph)PSVTDPRPLNPSAYSSTTLPAAR ddPTM_A549_PD325901_60min_R1 1 TSLGSGFGSPSVTDPRPLNPSAYSSTTLPAAR 32 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 T(0.001)S(0.001)LGS(0.003)GFGS(0.442)PS(0.262)VT(0.282)DPRPLNPS(0.002)AY(0.002)S(0.002)S(0.002)TTLPAAR 59.788999999999994 0.00044197 6266300.0 1572.9 1581.3 1527.9 1158.8 1186.2 1757.2 1413.8 1667.1 1636.5 1383.9 1494.1 True False 1732.5796500922186 1714.5617005728327 1631.5924820090859 1230.376444174254 1102.885404167845 1742.889945797804 1467.6029326610458 1633.8483826853499 1567.723596082047 1296.5203178221482 1310.335171880253 1.3222415815993627 1.3084909398505564 1.2451718590960568 0.9389784160404829 0.8416819053901072 1.3301100231453458 1.1200210176417098 1.24689348019322 1.19642945539839 0.9894570073714183 1.0 10.35572017196699 -10.739980846642347 0.9747444225876915 0.9992056873067823 1.1678765715428778 0.17136767409661635 0.14919314692634966 0.9306345684282152 1.5598590023457932 0.10917240671052518 0.027562888484678496 1.819781113256052e-11 10.739980846642347 0.16867088423609555 TSLIAASGKEDDLGEPQAAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 TSLIAASGKEDDLGEPQAASPR 22 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 TSLIAASGKEDDLGEPQAAS(1)PR;TSLIAASGKEDDLGEPQAAS(1)PR 198.02 6.244999999999999e-61 69129000.0 14645.3 15142.8 15373.900000000001 13356.0 18540.300000000003 16428.9 15752.6 14677.5 23538.0 24315.0 26744.0 True False 17117.068596792145 15913.50383987172 17554.150195601753 16628.220599573633 15813.04643018689 18167.395293378788 18614.643515042866 16758.080572958566 18206.680582462235 18822.224612499096 20102.726703149525 0.851479943470076 0.7916092217170981 0.8732223471381878 0.8271624464241691 0.7866120185432077 0.9037279152052778 0.9259760523992241 0.83362226529862 0.90568214209517 0.9363020693879398 1.0 14.295103579178148 -9.950947764141665 0.24037371264299665 1.059899762070215 0.8084055921793641 0.5507109313328156 0.04193844041693681 1.3872872904767466 0.16516562929850426 0.11275600705401129 0.03821278749905226 1.1195725347645433e-10 9.950947764141665 -0.25149416989085094 TSLIAASGKEDDLGEPQAAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TSLIAASGKEDDLGEPQAASPR 22 1 Q6ZVF9 Q6ZVF9 GPRIN3 G protein-regulated inducer of neurite outgrowth 3 1 TSLIAASGKEDDLGEPQAAS(1)PR;TSLIAASGKEDDLGEPQAAS(1)PR 222.13 9.523799999999998e-88 74419000.0 22366.0 24242.0 21993.0 22304.0 26405.0 22725.0 22271.1 25777.0 25323.0 26122.0 28361.0 True False 24636.579855021035 26284.958417306407 23485.577234652657 23681.66742394075 24550.403892304807 22539.935134449726 23118.63889771354 25262.857513334686 24258.762373104604 24472.652461991587 24872.776795191643 0.9905037968974871 1.0567761948632837 0.9442281988874215 0.9521119261810304 0.9870391269321744 0.9062090381001249 0.9294755904448428 1.0156830385829076 0.9753137968010979 0.9839131619081064 1.0 14.602279958476428 -10.149278188339663 0.7206949957615603 0.9989238451376473 0.9716977144670134 0.031554491370747284 0.03945737029243342 1.663029404673758 1.672117567139854 0.023251324346525493 0.008527706434252665 7.091233918164795e-11 10.149278188339663 -0.027226130670633952 TSLPLS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 TSLPLSPVK 9 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 T(0.011)S(0.001)LPLS(0.988)PVK;T(0.002)SLPLS(0.998)PVK 147.74 2.7646999999999998e-05 90759000.0 6716.7 7635.0 7031.5 6011.9 8137.2 6512.7 6599.8 6654.9 8153.1 8552.5 8564.3 True False 7850.314752451216 8023.588888278296 8028.672431873097 7484.815769884447 6940.228659283664 7201.869591219622 7798.898230805074 7598.252454776493 6306.4358678253375 6620.484310030781 6437.547947344586 1.2194572866349493 1.2463734567736982 1.247163127567047 1.1626811685296803 1.0780857425918555 1.1187286914407075 1.2114703136342508 1.1803022698899952 0.9796332267205357 1.0284170874038545 1.0 12.652295557187232 -8.759182721140716 24.86681539083987 0.9903823482717019 1.1819096404523266 0.7194250983001287 0.04999590875624644 20.589926928596462 226886.21941291055 0.009247138803918727 0.010239832112797033 1.7410741954288448e-09 8.759182721140716 0.1915272921806247 TSLPLS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 TSLPLSPVK 9 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 TSLPLS(1)PVK;TSLPLS(1)PVK 143.24 3.609e-05 133936000.0 6542.5 6586.0 6518.2 7270.4 7773.099999999999 7410.4 6568.5 6935.9 6646.2 7198.8 7975.3 True False 7206.68978366606 7141.025333569011 6960.564249120762 7719.476095723586 7227.144271739227 7350.052159310285 6818.467861921118 6797.558033391712 6366.8833267830805 6744.266539445108 6994.388659592118 1.0303530636352032 1.0209649021685112 0.9951640647785609 1.1036670210107757 1.0332774776288574 1.050849833634911 0.9748482953646361 0.9718587805482511 0.910284463253486 0.9642396022983378 1.0 12.771982249654975 -7.863556313961722 4.120708741048786 0.9581148213892752 1.0389207401427836 0.5807796790511133 0.03165716838720484 0.1467812168619701 4.595137549779773 0.006278578576727936 0.008835344055133297 1.3691268453669612e-08 7.863556313961722 0.0808059187535084 TSLPTVGPSGLYS(ph)PSTNR ddPTM_A549_MK2206_60min_R1 2 TSLPTVGPSGLYSPSTNR 18 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 TSLPTVGPS(0.06)GLYS(0.934)PS(0.003)T(0.003)NR;TSLPT(0.001)VGPS(0.29)GLY(0.23)S(0.455)PS(0.012)T(0.012)NR 106.38 4.7401e-09 6521500.0 3129.81 3785.2999999999997 4340.2 3507.1 5419.9 3578.3 3829.7000000000003 3704.0 5640.3 5241.4 5683.3 True False 3658.045411492154 3977.955601676469 4955.705623098285 4366.339657439701 4622.639889698116 3956.953330916696 4525.506917560256 4229.053343024257 4362.7810557082885 4057.364099689603 4271.979758899556 0.8562880954366813 0.93117379439578 1.1600489475106628 1.0220880958865899 1.0820837528707974 0.926257509220032 1.0593465261937494 0.9899516340671153 1.0212550859164469 0.9497620140257319 1.0 12.06068909605918 -5.530946028007276 24.997580585932155 1.0205301850686954 0.8750094661126805 0.42553319730320005 0.06057788760464194 92.59182129375921 286909.70348489797 0.007146227774065057 0.027777715030844648 2.944787574847285e-06 5.530946028007276 -0.14552071895601493 TSLPTVGPSGLYS(ph)PSTNR ddPTM_A549_PD325901_60min_R1 3 TSLPTVGPSGLYSPSTNR 18 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 TSLPTVGPS(0.096)GLY(0.005)S(0.765)PS(0.059)T(0.075)NR;TSLPTVGPS(0.007)GLY(0.002)S(0.976)PS(0.011)T(0.004)NR;TSLPTVGPS(0.003)GLYS(0.934)PS(0.027)T(0.036)NR 117.2 4.6199999999999996e-10 12307800.0 6067.9 7157.8 7013.7 7030.3 8755.5 7896.799999999999 7640.8 7718.200000000001 7736.400000000001 8686.7 9097.2 True False 6683.908741048111 7761.012926301287 7489.691858804319 7464.545664030247 8140.543884835242 7832.4910789756905 7931.574825206189 7564.254446189233 7411.266012055706 8138.220279518503 7978.30207190217 0.8377608018361916 0.9727649888857771 0.9387576192660555 0.9356057964160996 1.0203353810711746 0.9817240571223803 0.9941432091346173 0.9481032904017107 0.9289277273865776 1.0200441404919387 1.0 12.961866031976 -4.48931035330252 1.5788478524704304 0.9683488537573276 3.666998811171023e-11 0.5818159071693777 0.03245799686937865 6.407352220114977 2.3591938264435406 0.0047743530223405455 17.299752910739066 3.241079222262934e-05 4.48931035330252 -0.9683488537206576 TSLS(ph)FQDPKLELQFPR ddPTM_A549_PD325901_60min_R1 2 TSLSFQDPKLELQFPR 16 1 P48681 P48681 NES Nestin 1 T(0.017)S(0.017)LS(0.965)FQDPKLELQFPR;T(0.183)S(0.183)LS(0.634)FQDPKLELQFPR 68.952 0.00050788 4034100.0 2346.0 2227.7 2455.27 2338.4 2536.0 2760.3 2843.5 2621.2 2775.9 2416.1 2903.1 True False 2584.164192966081 2415.4360971138285 2621.8993869379187 2482.837657108278 2357.880108725051 2737.821031974549 2951.710948522905 2568.918109708379 2659.2385764522796 2263.547033665796 2546.0371042671572 1.0149750719009643 0.948704201154633 1.0297962203864257 0.975177326735358 0.9260980936896971 1.0753264464944214 1.15933540150528 1.008986909657708 1.0444618312888672 0.8890471509123303 1.0 11.314037728941486 -7.270311867617857 24.97983978943984 1.0354079479525666 0.9798850263858462 0.12347862941150045 0.06606926961790442 784.2382077251857 2207964.9425606057 0.007899457435402837 0.012733309189290632 5.366462913418403e-08 7.270311867617857 -0.05552292156672045 TSLS(ph)PTSK ddPTM_A549_MK2206_60min_R1 2 TSLSPTSK 8 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 T(0.001)SLS(0.979)PT(0.019)S(0.002)K;T(0.019)S(0.001)LS(0.976)PT(0.004)SK 152.04 0.00056101 440460000.0 31350.0 33734.0 30534.0 26487.0 35908.0 25270.0 26204.0 27668.0 37255.0 36101.0 38884.0 True False 36641.11356608833 35450.91651043618 34864.18033631699 32976.316189046614 30625.980767039957 27944.054627131587 30964.927609929993 31590.023729696324 28816.80198401011 27945.759026766613 29228.02965619451 1.2536292728963585 1.2129081887298143 1.1928337539827276 1.1282428742868646 1.0478291259208836 0.9560704212987959 1.0594257626725574 1.0808126343542703 0.9859303662606882 0.9561287351726723 1.0 14.835064955835088 -6.511718483523726 1.3188997388421706 1.0025318884164403 1.2366393574228463 0.8609575072314122 0.03733544235328247 0.11267868241867635 0.3751893330870566 0.005579493455614405 0.01892711565640006 3.078091435213661e-07 6.511718483523726 0.234107469006406 TSLS(ph)PTSK ddPTM_A549_PD325901_60min_R1 2 TSLSPTSK 8 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 TSLS(1)PTSK;TSLS(0.998)PT(0.002)SK 167.69 7.535499999999999e-06 572030000.0 23161.6 23097.7 24761.0 24920.0 28471.0 25408.0 25705.0 27794.0 30818.0 33332.0 35469.0 True False 25512.94858133126 25044.224240385192 26441.43035998883 26459.25180257369 26471.295179617875 25201.08567199554 26683.217841315723 27239.626866028797 29522.826632481847 31227.411831525274 31106.53785651608 0.8201796258720224 0.8051112713316317 0.850028070689004 0.850600986989335 0.8509881524495266 0.8101539871855753 0.857800953754364 0.8756881589226023 0.9490875123634988 1.0038858061146743 1.0 14.92493021205642 -8.762072373768044 1.0106201675937834 0.9860710116444855 0.8305388154843732 0.9284090258125943 0.01834295686147797 0.08397180322474532 0.17128130305174386 0.004351464178524478 0.004568447102206055 1.7295281149425977e-09 8.762072373768044 -0.15553219616011227 TSNGDLS(ph)DSTVSADPVVK ddPTM_A549_MK2206_60min_R1 1 TSNGDLSDSTVSADPVVK 18 0 A0A087X256;Q2M389 A0A087X256 KIAA1033 WASH complex subunit 7 1 T(0.071)S(0.071)NGDLS(0.638)DS(0.071)T(0.071)VS(0.078)ADPVVK 53.328 0.013271999999999999 1200000.0 1556.7 998.46 1047.8 1014.5 1293.8 1313.7 957.99 1200.5 1607.9 1560.7 1555.9 True False 1819.4329023390674 1049.2773492325284 1196.393795650519 1263.052545542636 1103.4837338864963 1452.7148620365167 1132.044382576585 1370.6745513770584 1243.7132172886822 1208.1367860467747 1169.5270893445397 1.5556996660579847 0.8971808851564053 1.0229722821735037 1.0799686104325403 0.943529862574575 1.242138703132297 0.9679505441905053 1.1719904257585445 1.063432586230833 1.0330130845655519 1.0 10.191709563377145 -5.251504005958954 24.81494697826205 1.039805170792892 1.5556999765910735 0.711282776053296 0.0940361744278477 454.6708160765234 1135577.3964510907 0.011617514782646055 0.2127886778574099 5.60397248201735e-06 5.251504005958954 0.5158948057981816 TSNKFGS(ph)LEKR ddPTM_A549_PD325901_60min_R1 1 TSNKFGSLEKR 11 2 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 T(0.012)S(0.032)NKFGS(0.955)LEKR 46.964 0.006792 4381700.0 2026.3 2002.2 1799.0 2175.7 2693.3 2591.9 2162.5 2589.9 2635.6 2359.0 2393.7 True False 2232.008484316782 2170.9324207215113 1921.090958265819 2310.0880476267885 2504.1318993805917 2570.7924257417053 2244.795120865405 2538.2424127627555 2524.834897545887 2210.052337410541 2099.2900749145056 1.0632206149060566 1.0341269397036155 0.9151145814587134 1.1004139328962759 1.1928470149522206 1.2246008574333882 1.0693115485513955 1.2090956095555905 1.2027089194182523 1.0527617711432977 1.0 11.035685813238967 -6.493203164797209 22.1119804070196 1.1209739704052362 1.0072533441330858 0.35042693509671685 0.07666395385340932 196.37963013140205 146325.7100442865 0.013372110848085008 0.030999777090451514 3.2121575262205873e-07 6.493203164797209 -0.1137206262721504 TSNS(ph)LTEDSK ddPTM_A549_MK2206_60min_R1 2 TSNSLTEDSK 10 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.04)S(0.227)NS(0.729)LT(0.004)EDSK;T(0.007)S(0.015)NS(0.619)LT(0.326)EDS(0.033)K 67.964 0.004326 55885000.0 12858.099999999999 14121.7 14066.4 12220.5 17207.4 15398.5 13390.5 13432.3 19585.0 20232.1 22741.3 True False 15028.23292963702 14840.43421134246 16061.227034871596 15214.523048599096 14676.214254504937 17027.959049302954 15823.380520560506 15336.369659693499 15149.028770818366 15661.65455819629 17094.007582049595 0.8791521155880472 0.8681658844545259 0.9395823043706544 0.8900500936115096 0.8585590116337856 0.9961361586842866 0.9256682755409928 0.8971781243269255 0.8862186762293442 0.9162073014781262 1.0 14.061203046952748 -10.816472764643379 0.889935216423301 1.0045481279887662 0.9045805934427045 0.07340277233558556 0.043972473295708275 0.46663473385428816 0.606083091531181 0.032201821749718945 0.006670429743592099 1.5259040838860967e-11 10.816472764643379 -0.09996753454606178 TSNSLT(ph)EDSK ddPTM_A549_PD325901_60min_R1 1 TSNSLTEDSK 10 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.001)SNS(0.308)LT(0.675)EDS(0.017)K 119.16 6.4316e-05 28362000.0 16519.0 16251.0 15699.0 15782.0 19967.0 16580.0 16329.0 15708.0 16583.0 19575.0 21671.0 True False 18195.996719354942 17620.528802889472 16764.428545756033 16756.818296477446 18564.586802410515 16444.977977081475 16950.409030571656 15394.691617312388 15886.074178935907 18339.031159309612 19005.60438378753 0.9574016354290099 0.9271227816317392 0.882078160064023 0.881677738739612 0.9767953929550791 0.8652699301217507 0.8918637202103907 0.8100080011370024 0.835862614949899 0.9649275439487456 1.0 14.214137283603783 -10.966713369631018 1.2739378064310436 0.9991259941964225 0.8863492271371683 0.3410472389813962 0.047395727430882384 0.35648459898932616 1.0416752683585027 0.034119775331293616 0.008162213068462624 1.0796590521959389e-11 10.966713369631018 -0.1127767670592541 TSPASLDFPES(ph)QKSSR ddPTM_A549_MK2206_60min_R1 2 TSPASLDFPESQKSSR 16 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TSPASLDFPES(0.368)QKS(0.296)S(0.335)R;TSPASLDFPES(0.441)QKS(0.441)S(0.118)R 56.081 0.0030893 10321500.0 4934.5 4803.7 4219.8 3889.6 4924.3 3790.6 3474.1000000000004 2964.4 5371.700000000001 4777.6 4919.6 True False 5767.322963057831 5048.187811738372 4818.2310926570535 4842.552174610779 4199.941993180766 4191.718776003362 4105.299000521211 3384.612778094252 4155.018526842226 3698.3368418126965 3697.9275459472938 1.5596095086769535 1.3651397300282107 1.3029544340146808 1.3095313833062858 1.1357556201401646 1.1335318834456976 1.1101620974213982 0.9152728754254755 1.123607338222696 1.0001106824999455 1.0 11.852501242739363 -3.5084388028200144 0.3223483334466676 1.0314453448739764 3.0772895445041226 0.879406621137559 0.06258119585554961 4.92615984015264 0.14705396006307483 0.020322257332065358 5.0166817076476695 0.0003101424384769717 3.5084388028200144 2.045844199630146 TSPASLDFPES(ph)QKSSR ddPTM_A549_PD325901_60min_R1 2 TSPASLDFPESQKSSR 16 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TSPASLDFPES(0.544)QKS(0.368)S(0.088)R;TSPASLDFPES(0.494)QKS(0.253)S(0.253)R 85.97399999999999 1.3656e-05 19243200.0 5203.0 6642.8 6099.9 6803.5 7734.599999999999 6986.0 7136.4 6577.299999999999 7683.700000000001 6786.6 7410.5 True False 5731.204729753842 7202.6120689086265 6513.875895678525 7223.736743130421 7191.34837892144 6929.108332200914 7407.979607187922 6446.1105917079685 7360.780809786513 6358.092917791602 6499.05547902993 0.881851947293932 1.1082552060293709 1.0022803954661434 1.1115056282314826 1.1065220788044179 1.0661715928658568 1.1398548036850518 0.9918534489368809 1.132592394931395 0.9783103003670053 1.0 12.666014348228794 -5.253724486689463 24.350626995121875 1.0685028209171918 0.881851815967207 0.44538180196755217 0.05812747616113275 443.51736011087587 1399831.2133202802 0.007796724205128317 0.11284293238537614 5.575393357271925e-06 5.253724486689463 -0.18665100494998488 TSPASLDFPESQKS(ph)SR ddPTM_A549_MK2206_60min_R1 1 TSPASLDFPESQKSSR 16 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TSPASLDFPES(0.294)QKS(0.353)S(0.353)R 45.608000000000004 0.010775 3821200.0 1806.9 2042.1 1885.7 1840.7 2743.7 1587.3 1575.9 1633.6 2331.5 2293.1 2608.2 True False 2111.8605455363654 2146.0341674856722 2153.1206150583935 2291.671582632162 2340.105364557412 1755.2670324355342 1862.220631219993 1865.1678026901795 1803.4189726404395 1775.0871173728838 1960.511957342005 1.0771985029867166 1.0946294713729734 1.0982440617080045 1.1689148714701705 1.193619531772735 0.8953105467488529 0.9498644597632182 0.9513677260193354 0.9198714478056299 0.9054201943146963 1.0 10.937014725672624 -7.263116764265943 24.99999933850905 0.9551780502338204 1.1255337634842622 0.8282057658711313 0.042546214353913744 54.92531889264635 818619.038779408 0.006947767581469251 0.011469449222135613 5.456111485427291e-08 7.263116764265943 0.17035571325044174 TSPDTLRR ddPTM_A549_PD325901_60min_R1 2 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 ; 85.064 0.0030786 10197600.0 1766.7 1945.2 1820.87 1545.9 1696.81 2066.24 1736.04 2002.01 1813.77 2337.1400000000003 2255.88 False True 1946.0540834242008 2109.1288306799934 1944.4451879808116 1641.3867320063666 1577.6319192767169 2049.4132264996892 1802.1059521975387 1962.078340003537 1737.543554455078 2189.572581541192 1978.4210612015418 0.9836399953416975 1.0660667094794622 0.9828267733866036 0.8296447931106807 0.7974196950362952 1.035883243810108 0.9108808976705278 0.9917395131306986 0.8782476028635819 1.1067272910102428 1.0 10.950133787736142 -6.003430884340824 24.464643334478524 0.9319578657106502 1.024751731655043 0.10405961901110172 0.0878237030598311 131.45111131918023 937381.3067807127 0.010372530637636514 0.03131199272765881 9.921312190877175e-07 6.003430884340824 0.09279386594439276 TSPGGRT(ph)SPEAR ddPTM_A549_MK2206_60min_R1 2 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 T(0.02)S(0.02)PGGRT(0.48)S(0.48)PEAR;T(0.003)S(0.003)PGGRT(0.561)S(0.433)PEAR 52.823 0.0095111 24425000.0 1126.3400000000001 1260.97 1032.55 961.8600000000001 1369.6399999999999 828.9300000000001 810.46 1046.7 1302.22 1596.6399999999999 1735.77 True False 1316.438655630876 1325.1479869616626 1178.9811163379875 1197.5157431795365 1168.1677703511361 916.6468224007988 957.7100912358366 1195.0729303843123 1007.2692492180283 1235.9579150853601 1304.7304041850828 1.0089736940353635 1.0156488901546925 0.9036204817150432 0.9178261956173918 0.8953326806856764 0.7025564970821111 0.7340291052955186 0.915953921630836 0.7720133186036661 0.9472898854206766 1.0 10.349536018870143 -5.902587494475209 1.4863076090319127 0.867009158195071 1.0263002619207102 0.3033754766483431 0.0872915335514205 0.6082463973097687 2.303070152892732 0.01576647349161248 0.09984148789110242 1.2514471267473434e-06 5.902587494475209 0.15929110372563926 TSPGGRT(ph)SPEAR ddPTM_A549_PD325901_60min_R1 1 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 TSPGGRT(0.5)S(0.5)PEAR 89.624 0.00010874 41275000.0 1614.0 1597.7 1565.6 1421.1 1748.5 1812.0 1589.4 1497.4 1738.5 1803.8 1954.4 True False 1777.8520918359998 1732.343786128637 1671.8510307176023 1508.8781194477326 1625.6913919975354 1797.2436727666848 1649.8854867530522 1467.5331823124243 1665.4368907966025 1689.9077601615663 1714.021189962364 1.0372404391774395 1.0106898306004464 0.9753969440449639 0.8803147407301681 0.9484663325738885 1.0485539404598307 0.9625817326034808 0.8561931386301286 0.9716547849873267 0.9859316617892413 1.0 10.74316922985617 -9.99999817883684 1.3894863802726105 0.9950660933551985 0.9645317492117271 0.03302547346380158 0.05550243502193309 0.9840541510326205 3.803159530334576 0.016779151065940256 0.01031199315121395 1.000004193391936e-10 9.99999817883684 -0.030534344143471337 TSPGGRTS(ph)PEAR ddPTM_A549_MK2206_60min_R1 2 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 TSPGGRT(0.039)S(0.961)PEAR;TSPGGRT(0.203)S(0.796)PEAR 116.58 6.626900000000001e-06 35839000.0 2542.5 2483.8 3057.5 2646.6 3045.6 2408.9 2436.0 2216.7 3259.1 4074.8999999999996 4084.4 True False 2971.6118418430488 2610.2148108324345 3491.099475282938 3295.0171188103905 2597.596274481925 2663.8081991015924 2878.589667905262 2530.924013359039 2520.919053713256 3154.3772598590404 3070.1307562946436 0.9679105151304703 0.8501966261471925 1.1371175211756661 1.0732497669861993 0.8460865287760503 0.86765301238067 0.9376114232279301 0.8243701048139148 0.8211112991017249 1.0274406890949734 1.0 11.584084385677961 -6.765930839868121 24.999984463133355 0.9007077149673672 1.005195530930168 0.2306897924601694 0.09093996381262434 139.40014266409167 775923.1603479162 0.014029566340590075 0.027161693783834578 1.7142302719536125e-07 6.765930839868121 0.10448781596280066 TSPGGRTS(ph)PEAR ddPTM_A549_PD325901_60min_R1 2 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 T(0.001)S(0.002)PGGRT(0.247)S(0.75)PEAR;TSPGGRT(0.035)S(0.965)PEAR 107.69 3.5268e-05 42306800.0 2706.87 2916.9399999999996 3220.97 3277.06 3267.48 3084.7799999999997 3051.57 3480.9399999999996 2805.02 3791.85 3582.3999999999996 True False 2981.6694497076255 3162.760770801818 3439.564393466066 3479.476553456747 3037.9834769940585 3059.6585744355502 3167.699166233179 3411.5099209553987 2687.1347641198067 3552.431943878832 3141.7875107046493 0.9490359992674642 1.0066755819818205 1.0947794469698655 1.1074830941308185 0.9669601991360296 0.9738591690274181 1.0082474245760555 1.0858499848674537 0.8552885117036856 1.1307040758724265 1.0 11.61736989444151 -8.755748332401721 24.999992240447703 0.9316640195635488 1.0245559159271191 0.0 0.0841327838931376 140.66706131254907 617930.5002453945 0.012211385215944528 0.013659539049225664 1.7548971456808294e-09 8.755748332401721 0.09289189636357031 TSPGS(ph)PR ddPTM_A549_MK2206_60min_R1 4 TSPGSPR 7 0 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 TSPGS(1)PR;T(0.008)S(0.037)PGS(0.955)PR;TSPGS(1)PR;TS(0.001)PGS(0.999)PR 95.741 0.011857 1811395000.0 13982.48 12105.18 9679.75 7229.46 13549.400000000001 10369.41 10517.429999999998 10498.31 13008.6 16328.5 17931.100000000002 True False 16342.380785185296 12721.281956595774 11052.484103309898 9000.67802454279 11556.301208781646 11466.694083542714 12428.310891180965 11986.477592225976 10062.172870465549 12639.880509364235 13478.312996815903 1.2124945302165038 0.9438333981115464 0.8200198426851284 0.6677896578502887 0.8573996769114718 0.8507514320413533 0.9220969192596292 0.8893158657954927 0.7465454224755443 0.9377939592551576 1.0 13.71835231349981 -5.30139749522394 2.9746089793090773 0.8610687569517445 1.254665100669346 0.5866493358479066 0.08657610103577498 0.22749636807814827 3.031443441588836 0.01482321307804386 0.20162658682636325 4.995770794584863e-06 5.30139749522394 0.39359634371760144 TSPGS(ph)PR ddPTM_A549_PD325901_60min_R1 4 TSPGSPR 7 0 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 T(0.002)S(0.002)PGS(0.997)PR;TSPGS(1)PR;TSPGS(1)PR;T(0.002)S(0.002)PGS(0.996)PR 101.54 0.010915000000000001 2413700000.0 18527.800000000003 19153.9 15109.7 15861.800000000001 17477.6 14984.699999999999 11424.3 13717.9 16352.599999999999 18934.6 21857.1 True False 20408.728616554545 20768.066373617898 16135.135104007244 16841.547361238507 16250.033670446735 14862.669571361446 11859.057988116827 13444.285723015628 15665.357089698318 17739.066124600948 19168.815263572644 1.0646838803511327 1.0834298358065133 0.8417387763483517 0.8785909368766912 0.8477328122269194 0.7753567117737131 0.618664107565016 0.7013623710258403 0.8172313663780723 0.9254127540323939 1.0 14.226473552956831 -5.760213972697582 24.99835305372372 0.8587034721502312 1.0740569363995924 0.4405360829868421 0.10288385279319774 29.2032314004669 595671.268350081 0.01791017797274234 0.06250115864637606 1.7369448419472026e-06 5.760213972697582 0.2153534642493612 TSPLKDNPS(ph)PEPQLDDIKR ddPTM_A549_PD325901_60min_R1 2 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 1 TS(0.001)PLKDNPS(0.999)PEPQLDDIKR;TSPLKDNPS(1)PEPQLDDIKR 85.37100000000001 1.2878e-05 27649000.0 6861.2 6935.0 6886.9 6999.1 7783.7 7784.1 7119.9 7589.8 7778.799999999999 7862.200000000001 8006.4 True False 7557.743973051515 7519.436788384614 7354.286448293975 7431.418510890588 7236.999764307246 7720.708870410127 7390.851690658778 7438.415484917083 7451.884087505669 7365.779350228551 7021.663556751258 1.0763466395060786 1.0708910684213504 1.0473709526032338 1.0583558227801095 1.0306674060663223 1.0995555124521375 1.0525784425476425 1.0593523065862538 1.0612704563921693 1.0490077302474041 1.0 12.777597155754732 -10.638541451851653 0.6391176970683334 0.9935747006385335 1.062369250552277 0.18918138470168921 0.021855036647690007 0.4540409546225694 0.2841214257545004 0.017367532629541136 0.0033273369180683975 2.2985743081147398e-11 10.638541451851653 0.06879454991374356 TSPS(ph)SPAPLPHQEATPR ddPTM_A549_MK2206_60min_R1 1 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.286)S(0.286)PS(0.377)S(0.051)PAPLPHQEATPR 132.74 1.1124e-12 38153000.0 1310.9 1671.0 1240.3 1270.4 1983.8 1675.2 1561.4 1712.5 2701.6 2143.3 1954.4 True False 1532.1478715720964 1756.04676258193 1416.1931902513265 1581.6480570304232 1691.9856479239686 1852.4685520922362 1845.0861689110334 1955.252119311296 2089.6919135686967 1659.1270414135026 1469.0685413040485 1.04293831669151 1.1953470605415997 0.9640075669949436 1.076633262888089 1.151740439844994 1.2609817037180953 1.2559564901398033 1.330946830823616 1.4224604603633668 1.1293734735758107 1.0 10.52068599294064 -6.954568575515466 3.3172232516324525 1.2234540287931703 1.0714934719901785 0.31187542892199305 0.11296302105840443 0.3632119111696377 8.262411452706953 0.02405615033055105 0.04682622557967878 1.1102772076552276e-07 6.954568575515466 -0.1519605568029918 TSPS(ph)SPAPLPHQEATPR ddPTM_A549_PD325901_60min_R1 2 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.001)S(0.001)PS(0.914)S(0.084)PAPLPHQEATPR;TSPS(0.5)S(0.5)PAPLPHQEATPR 224.06 1.5880999999999997e-63 17952200.0 5446.5 5450.9 5089.0 5887.6 5773.2 5720.700000000001 5909.5 6129.7 5124.4 6041.4 6720.1 True False 5999.424670498616 5910.266472935216 5434.370142642994 6251.263680290246 5367.710348458779 5674.112515892043 6134.389256302478 6007.438324843371 4909.039288581023 5659.944972968227 5893.570302223736 1.017960991868535 1.0028329467292825 0.9220845538387015 1.0606921373164153 0.9107739575844982 0.9627631851190631 1.0408613016778434 1.0193207201713825 0.8329482871747141 0.9603592869389617 1.0 12.524926162658865 -8.717172447430881 24.99999710974247 0.921114189321018 0.9903959239818408 0.17607506055295785 0.05763960853323924 176.69635825994354 99790.01839065431 0.012007650284687294 0.013615360664615543 1.9179070367400395e-09 8.717172447430881 0.06928173466082288 TSPSGGTWSSVVSGVPRLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TSPSGGTWSSVVSGVPRLSPK 21 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 TSPSGGTWSSVVSGVPRLS(1)PK;TSPSGGTWSSVVSGVPRLS(1)PK 183.31 6.8116e-45 37418000.0 7905.4 8251.2 6962.0 6962.299999999999 10816.9 8554.0 8616.8 8483.7 12182.2 12223.900000000001 12262.9 True False 9239.638251526472 8671.150836275294 7949.316286809429 8668.063812549519 9225.748339060785 9459.178602314349 10182.361022334178 9686.290455241611 9422.951150975925 9462.512500132747 9217.683491177551 1.0023818088752923 0.940708242431479 0.8623984859555978 0.9403733400963392 1.000874932176935 1.0261991108034831 1.1046550938833972 1.0508378232462174 1.022268898687489 1.0265607957996743 1.0 13.17018851517587 -6.818783464202193 3.490961096830604 1.022611141158519 0.930488487372411 0.5645982421585702 0.040475599760230324 0.15474436141250159 3.829968501084031 0.006357879968345147 0.012915270328415817 1.5178069453842663e-07 6.818783464202193 -0.09212265378610807 TSPSGGTWSSVVSGVPRLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TSPSGGTWSSVVSGVPRLSPK 21 1 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZHH4 Q99700;A0A5F9ZHH4 ATXN2 Ataxin-2 1 TSPSGGTWSSVVSGVPRLS(1)PK;TSPSGGTWSSVVSGVPRLS(1)PK 241.71 1.022e-86 69085000.0 22159.0 21118.5 23419.0 22054.0 20322.0 24018.0 20744.8 19630.0 28636.0 26305.0 29654.0 True False 24408.565367406387 22898.230110382192 25008.35416988727 23416.22549173194 18894.652827094036 23822.40537114253 21534.254715990137 19238.4642505629 27432.528504372458 24644.097810760613 26006.74599219396 0.9385474589836317 0.8804727095521754 0.9616102751722049 0.9003904409556054 0.7265289103360086 0.9160086916791871 0.8280257254196176 0.739748996523341 1.0548235643400545 0.9476040492785084 1.0 14.666598277692062 -8.78435440056551 24.999831758285296 1.0258889277964807 0.8629011937571804 0.39269252231771645 0.07544813509567988 134.46563443055646 146698.67048144716 0.012614374966460753 0.013433244922536912 1.643030401650871e-09 8.78435440056551 -0.16298773403930022 TSPSS(ph)PAPLPHQEAT(ph)PR ddPTM_A549_MK2206_60min_R1 2 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 2 T(0.175)S(0.073)PS(0.311)S(0.449)PAPLPHQEAT(0.992)PR;T(0.033)S(0.038)PS(0.191)S(0.739)PAPLPHQEAT(1)PR 67.13600000000001 0.0029223 14856300.0 3366.3 5861.700000000001 2881.7 5165.3 4211.5 2675.1000000000004 2217.3 2456.45 4350.2 5122.700000000001 5539.8 True False 3934.4491418667676 6160.035492654999 3290.368391798148 6430.7987318791265 3591.9939289403146 2958.1773064123336 2620.1547088039138 2804.65931006262 3364.8866458419247 3965.478512130337 4164.114769298075 0.9448464703411571 1.47931453236419 0.7901723593350406 1.5443375334640779 0.8626068511425299 0.7103976403875581 0.6292225008115184 0.6735307419337504 0.8080677004032547 0.952298082984581 1.0 12.023794116703687 -6.944753590412958 24.983330933439206 0.8492080944210187 1.1845287209975182 0.39193402753894957 0.22621558298324768 77.18033919330239 34901.71872512668 0.031650156630754524 0.059813170912133715 1.1356549797467671e-07 6.944753590412958 0.3353206265764994 TSPSS(ph)PAPLPHQEATPR ddPTM_A549_MK2206_60min_R1 4 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.008)S(0.008)PS(0.053)S(0.931)PAPLPHQEATPR;TSPS(0.025)S(0.974)PAPLPHQEATPR;T(0.004)S(0.004)PS(0.033)S(0.958)PAPLPHQEATPR;TSPS(0.016)S(0.984)PAPLPHQEATPR 208.39 7.313e-55 256479400.0 6179.6 6578.1 5944.599999999999 5904.6 6995.700000000001 6102.9 6014.1 5888.9 8734.4 9152.8 8466.5 True False 7222.565403285473 6912.8971926631975 6787.63366828028 7351.227265067567 5966.641797147751 6748.70482722285 7106.784122228666 6723.66960899988 6756.072345970691 7085.1761231043265 6364.034386487265 1.1349035791857323 1.0862444752563456 1.066561438243081 1.1551206072481954 0.9375564987229962 1.0604444315310984 1.1167105157882993 1.0565105718592955 1.061602112068382 1.1133151854346135 1.0 12.635725915598274 -14.99999999974313 0.05642430887339451 0.7189880037027477 1.2015554937791564 0.0 0.06091350242342039 309.96614588791266 1.3269409290572478 12.57307714790192 2.4641255192690568 1.0000000005914653e-15 14.99999999974313 0.48256749007640865 TSPSS(ph)PAPLPHQEATPR ddPTM_A549_PD325901_60min_R1 2 TSPSSPAPLPHQEATPR 17 0 P04920-2;P04920-3;P04920 P04920-2 SLC4A2 Anion exchange protein 2 1 T(0.002)S(0.002)PS(0.069)S(0.927)PAPLPHQEATPR;T(0.007)S(0.007)PS(0.039)S(0.947)PAPLPHQEATPR 106.92 3.0669000000000002e-09 266560000.0 13347.7 14330.1 16045.7 15437.0 16501.1 15828.1 14125.400000000001 15512.099999999999 11963.2 15138.9 15780.2 True False 14702.748677942596 15537.747818490325 17134.657692632485 16390.5084300293 15342.119661704624 15699.201201389835 14662.949826715469 15202.698996492967 11460.428307148646 14183.027270379167 13839.335438929642 1.0623883453669458 1.1227235503507704 1.2381127524688216 1.1843421602400996 1.1085878891661007 1.1343898173916969 1.059512567739996 1.0985136579411339 0.828105392612336 1.0248344173003228 1.0 13.756487046369472 -8.648625233756674 6.117674016570185 0.919127487169056 1.1313115970497474 0.5581685080788623 0.06808932827091403 0.10311871025302605 5.2103824267827505 0.013234407661395373 0.014995564075150796 2.245819075119841e-09 8.648625233756674 0.21218410988069136 TSPT(ph)RESLPR ddPTM_A549_PD325901_60min_R1 1 TSPTRESLPR 10 1 Q9NQW5-2 Q9NQW5-2 1 T(0.126)S(0.126)PT(0.637)RES(0.11)LPR 43.308 0.027224 9318500.0 1547.1 1510.7 1690.8 1861.8 1894.5 1922.0 1863.1 1652.8 1633.3 1919.8 2267.9 True False 1704.1604530851748 1638.011990802112 1805.5478556063622 1976.7991575454143 1761.4368556701934 1906.3478692370682 1934.001290027438 1619.8336074034821 1564.658080953748 1798.5835003648813 1988.962677402601 0.8568086633534264 0.8235508938464356 0.9077836784570732 0.9938844906466163 0.8856057862133768 0.9584633693210272 0.9723668080856412 0.8144112636235251 0.7866704080124042 0.9042821772370625 1.0 10.95780048912365 -11.147570757220297 1.5478104822031131 0.9995816190131096 0.8776354032015347 0.034353874985643795 0.06988417638608739 0.4347648498799567 1.8776009819457549 0.053303765744573184 0.011559733455090452 7.119168018462841e-12 11.147570757220297 -0.12194621581157494 TSPT(ph)TPEASATNSPCTSKPATPAPSEK ddPTM_A549_MK2206_60min_R1 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 T(0.062)S(0.062)PT(0.385)T(0.348)PEAS(0.062)AT(0.075)NS(0.006)PCTSKPATPAPSEK 74.404 3.0835e-06 14828000.0 880.4 769.99 918.9 653.41 1046.8 1082.8 869.27 1008.0 1224.2 1071.9 1149.5 True False 1028.9899962865766 809.1792021067982 1049.213837395746 813.4954793326891 892.8171066875746 1197.3811772955319 1027.205106986866 1150.8870868705321 946.9206546456901 829.7570455331185 864.047425413939 1.1908952749828734 0.9364985975383758 1.2143012137245814 0.9414940145709804 1.0332964145571673 1.3857817778021881 1.1888295442750298 1.331972126783639 1.0959128246832621 0.960314238695413 1.0 9.754966690278925 -9.634785640080086 1.4720385112793613 1.0228080576190905 1.1451996033066214 0.1680777719797426 0.13684568583568119 0.5495549409745516 2.4105215400823585 0.03426671009585822 0.02570664691535625 2.3185387564848737e-10 9.634785640080086 0.12239154568753086 TSPT(ph)TPEASATNSPCTSKPATPAPSEK ddPTM_A549_PD325901_60min_R1 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 T(0.064)S(0.064)PT(0.37)T(0.37)PEAS(0.108)AT(0.023)NS(0.001)PCTSKPATPAPSEK 96.46 1.2642e-09 26437000.0 1247.8 764.98 914.26 1450.2 1390.5 1509.4 1351.8 1183.6 1573.4 1208.3 1644.8 True False 1374.475737418191 829.4475492975437 976.307181492 1539.7755603568364 1292.8360769645828 1497.1079468399746 1403.243488733344 1159.992169483763 1507.2754696458876 1132.0077317902314 1442.5000272462617 0.9528427809059185 0.5750069557232261 0.676816057574553 1.0674353769658322 0.8962468301873187 1.037856442677481 0.972785762376824 0.8041540017841059 1.0449049852174233 0.7847540453439289 1.0 10.49435563078279 -6.257937755370828 24.972790755732095 0.9974065727276687 0.7189004197931582 0.31871553916243467 0.1277126215150234 158.3597984249182 1129379.3367842438 0.014523549040889355 0.0368028381773305 5.521565706526877e-07 6.257937755370828 -0.27850615293451053 TSPTT(ph)PEASATNSPCTSKPATPAPSEK ddPTM_A549_PD325901_60min_R1 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 T(0.022)S(0.022)PT(0.113)T(0.584)PEAS(0.193)AT(0.056)NS(0.008)PCT(0.002)S(0.002)KPATPAPSEK 64.914 0.00018394 24300000.0 1176.3 1194.8 1220.4 1121.4 1685.7 1092.2 1505.4 1229.2 1128.2 1394.2 1833.8 True False 1295.7171100537082 1295.4899891509642 1303.2236828613704 1190.6663311158168 1567.3022473492967 1083.305485317756 1562.6888207864888 1204.6826417112545 1080.785677421184 1306.1699740643394 1608.254225415974 0.80566684643317 0.8055256244179222 0.810334375166521 0.7403470871079799 0.9745363777570147 0.6735909461313927 0.9716677849127369 0.7490623202930893 0.6720241491308001 0.8121663561782339 1.0 10.651279763788835 -11.042486866346144 1.3587324539141243 0.9993518890109749 0.7885728136399999 0.023271475017098142 0.10930764279805937 0.3501096497576317 1.1580827444420227 0.06671950082775395 0.015123186103258836 9.068033871329325e-12 11.042486866346144 -0.21077907537097507 TSPTTPEASATNS(ph)PCTSKPATPAPSEKGEGIR ddPTM_A549_PD325901_60min_R1 1 TSPTTPEASATNSPCTSKPATPAPSEKGEGIR 32 2 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 TSPTTPEASATNS(0.995)PCT(0.004)S(0.001)KPATPAPSEKGEGIR 137.47 7.017799999999999e-31 14180000.0 932.19 981.56 1309.5 1260.1 1409.1 1532.7 1078.1 1478.8 1017.6 1615.0 1402.4 True False 1026.825242557992 1064.2795059851196 1398.3705446631966 1337.9335151052603 1310.1296771310995 1520.218199365066 1119.1276854589569 1449.304173903842 974.8338107993229 1513.0286243823764 1229.9136905460584 0.8348758538512576 0.8653286114024795 1.13696640293706 1.087827158433567 1.0652208258202465 1.2360364886174395 0.9099237564890308 1.1783787635215104 0.7926034308688077 1.2301908955177336 1.0 10.26434136234845 -8.768362293778733 24.99778086580368 0.9020627419632281 1.0414992285948523 0.0 0.16200065803725108 207.91595327120285 750756.6688672942 0.023963396427260895 0.025779424831941268 1.7046597476424828e-09 8.768362293778733 0.13943648663162422 TSPTTPEASATNSPCTSKPAT(ph)PAPSEK ddPTM_A549_MK2206_60min_R1 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 TSPTTPEASATNSPCTSKPAT(1)PAPSEK 145.57 4.9114999999999995e-33 8094700.0 423.73 711.24 811.71 624.74 1002.9 1088.2 792.92 925.06 1323.1 1316.2 1353.2 True False 495.24526479612825 747.4390780483375 926.8226835917957 777.8013280456439 855.3747385335967 1203.352601711301 936.9833002772743 1056.1900878774359 1023.4199625565369 1018.8695058594005 1017.1630935799408 0.4868887476570698 0.7348271705550186 0.9111839482199566 0.7646771033622004 0.8409415795092168 1.1830478409082459 0.9211731198185034 1.0383684726115439 1.0061512937463892 1.0016776191450811 1.0 9.99033530646737 -4.902670367189235 0.562482589045655 1.0079989559933318 3.825768413202011e-12 0.7380279446268463 0.09145178128590079 1.8462206820836753 0.29591604541401884 0.01553731751640695 1.3266335793483457 1.2512083465424857e-05 4.902670367189235 -1.007998955989506 down TSPTTPEASATNSPCTSKPAT(ph)PAPSEK ddPTM_A549_PD325901_60min_R1 1 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873;Q12873-3;Q12873-2 Q12873 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 TSPTTPEASATNS(0.001)PCT(0.001)S(0.004)KPAT(0.994)PAPS(0.001)EK 142.01 6.986499999999999e-33 9980900.0 1612.2 1320.5 1772.9 1289.9 1649.0 1480.4 1543.3 1985.4 2052.2 1615.2 2102.2 True False 1775.8693571610888 1431.7831692951538 1893.2196553137687 1369.5741934245511 1533.1799287411711 1468.344113225056 1602.0311260261637 1945.799639483831 1965.9531707177382 1513.2159963482436 1843.6427269437577 0.9632394233480268 0.7766055474688681 1.0268907460461147 0.7428631227780889 0.8316035999462614 0.7964363657698249 0.8689487950205417 1.055410362890331 1.0663417277037928 0.8207750743858769 1.0 10.848343392703995 -8.231594803327047 6.78868027864969 1.0340412637709502 0.8531839566651055 0.221193351681351 0.10106478601498856 0.1101316386470912 18.401020389843183 0.011877336269220537 0.015214740930546838 5.866852865080266e-09 8.231594803327047 -0.1808573071058447 TSPVTASDPAGPSYAAATLQASSAASSAS(ph)PVSR ddPTM_A549_MK2206_60min_R1 2 TSPVTASDPAGPSYAAATLQASSAASSASPVSR 33 0 F5H8D7;P18887;M0QYS5;M0R1U8 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TSPVTASDPAGPSYAAATLQASSAAS(0.006)S(0.101)AS(0.842)PVS(0.051)R;TSPVTASDPAGPSYAAATLQASSAAS(0.026)S(0.074)AS(0.846)PVS(0.054)R 164.46 1.0442e-51 15985200.0 963.13 1336.73 1559.74 1764.04 1942.21 1163.63 1275.94 1484.97 2567.7 2309.4 2008.8200000000002 True False 1125.6827977322696 1404.7638473645386 1780.9345856346065 2196.2298791907647 1656.5134818300303 1286.7645542449204 1507.7617819651236 1695.4690450298947 1986.1200497743341 1787.7049360520418 1509.9745533884561 0.7454978596865641 0.9303228615423885 1.1794467540119156 1.4544813846447402 1.0970472834212561 0.8521763173805534 0.998534563765749 1.1228461044096272 1.3153334573204458 1.183930505345501 1.0 10.56030852162329 -8.50584798138581 22.723195684314703 1.1526012402281591 1.0502634105708275 0.08492114251035887 0.18640177036993505 615.7152248945048 821514.9205284964 0.03541146287923516 0.04224783028415971 3.1199814981820488e-09 8.50584798138581 -0.10233782965733162 TSPVTASDPAGPSYAAATLQASSAASSAS(ph)PVSR ddPTM_A549_PD325901_60min_R1 2 TSPVTASDPAGPSYAAATLQASSAASSASPVSR 33 0 F5H8D7;P18887;M0QYS5;M0R1U8 F5H8D7 XRCC1 DNA repair protein XRCC1 1 TSPVTASDPAGPSYAAATLQASSAAS(0.005)S(0.099)AS(0.864)PVS(0.032)R;TSPVTASDPAGPSYAAATLQASSAAS(0.001)S(0.005)AS(0.93)PVS(0.064)R 199.78 1.1373999999999997e-88 29957000.0 1516.53 1999.58 1636.3899999999999 1929.51 2003.9299999999998 2091.54 2310.21 2611.8 2029.81 1983.1799999999998 2527.7 True False 1670.4870091896194 2168.0916241266195 1747.4452658124521 2048.6914504648453 1863.1808699831977 2074.5071916878765 2398.1263057454184 2559.7056000825373 1944.504144554415 1857.9616763483841 2216.808924410492 0.7535548015866301 0.97802368091024 0.7882705841583274 0.9241623975371023 0.8404787843763605 0.9358078492216204 1.0817920657654982 1.1546803027975134 0.8771636216105138 0.838124412027286 1.0 11.114268708595157 -7.423758631035807 5.1766514820504925 0.9708678386904281 0.8643240595486136 0.280395385524429 0.09937533565187798 0.28411765002874473 11.79959724841739 0.014860999899933074 0.023857487370645948 3.769132188152467e-08 7.423758631035807 -0.10654377914181457 TSQAT(ph)PCR ddPTM_A549_MK2206_60min_R1 1 TSQATPCR 8 0 Q70EL1-7;Q70EL1;Q70EL1-8 Q70EL1-7 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 T(0.018)S(0.144)QAT(0.839)PCR 45.137 0.05574400000000001 1589600.0 438.46 381.27 418.3 288.51 338.56 263.41 297.24 366.49 368.71 550.7 419.63 True False 512.461328682204 400.6750144641608 477.6212299299601 359.1949629517061 288.75827248772003 291.2838713625931 351.2446604631199 418.4410798285531 285.1977737088813 426.29648752223926 315.42428980117563 1.6246730047493443 1.270273176224704 1.514218293813148 1.1387676046702708 0.9154598482879545 0.9234668374658174 1.1135624992118496 1.3265975175605944 0.9041718819075497 1.3515017749297327 1.0 8.301149951445318 -6.4197420826501155 3.608933411033513 0.9903878809418539 1.449184069735436 0.44032627336276753 0.1773110849619518 0.10944535302399233 2.606969565881829 0.020391708373226538 0.049818576788069474 3.80415248981411e-07 6.4197420826501155 0.45879618879358197 TSQCSSPSLSASPGS(ph)PTRPQIR ddPTM_A549_MK2206_60min_R1 2 TSQCSSPSLSASPGSPTRPQIR 22 1 P37275-3;P37275-4;P37275-5;P37275;P37275-2;H0YMD3;H0YND9 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 TSQCSSPSLSASPGS(0.958)PT(0.041)RPQIR;TSQCSSPSLS(0.001)AS(0.008)PGS(0.985)PT(0.006)RPQIR 172.32 9.693000000000001e-41 42555000.0 4480.7 6177.700000000001 5333.4 5114.799999999999 6646.299999999999 5525.5 4528.3 3735.0 7392.4 8014.3 9056.8 True False 5236.932617402619 6492.118542909872 6089.756317734758 6367.926229612097 5668.638074300374 6110.20474246995 5351.033494735384 4264.447687957777 5718.033203237053 6203.864063826914 6807.746605036069 0.7692608026169142 0.9536369256322336 0.8945333413599482 0.9353941324580717 0.8326746577357869 0.8975370408102281 0.7860212497887226 0.6264110483787877 0.8399303815167131 0.9112947974940152 1.0 12.732961623322076 -10.468325840812149 1.0483080332314465 0.9908311658329575 0.841916941883075 0.1849161572076803 0.08974218104427478 0.47366660571515135 1.0032188290414614 0.0445362894752942 0.016440275708734728 3.40152885325466e-11 10.468325840812149 -0.14891422394988252 TSQCSSPSLSASPGS(ph)PTRPQIR ddPTM_A549_PD325901_60min_R1 1 TSQCSSPSLSASPGSPTRPQIR 22 1 P37275-3;P37275-4;P37275-5;P37275;P37275-2;H0YMD3;H0YND9 P37275-3 ZEB1 Zinc finger E-box-binding homeobox 1 1 TSQCSSPSLSAS(0.003)PGS(0.955)PT(0.042)RPQIR 88.721 5.837e-07 44065000.0 7940.3 8973.5 8928.9 8169.5 9670.8 8673.4 8948.2 8766.7 9051.6 9548.2 10967.0 True False 8746.39341066009 9729.728337500992 9534.868847837497 8674.111460719329 8991.556370448825 8602.7667060566 9288.728647642925 8591.841291156894 8671.192729786899 8945.325022493991 9618.128525540957 0.9093654121416684 1.011603069314751 0.9913434638056288 0.901850233929107 0.9348550860566827 0.8944324962191905 0.9657521858828035 0.8932965772230268 0.9015467725099048 0.9300483975380102 1.0 13.231540489511769 -3.9456581897404095 13.633963420558398 0.9460069204699416 0.9448665150147391 0.0 0.04343212289484403 0.0 0.0 0.006437733671255261 0.0 0.00011332919666011388 3.9456581897404095 -0.0011404054552025533 TSQEELLAEVVQGQS(ph)RTPR ddPTM_A549_MK2206_60min_R1 1 TSQEELLAEVVQGQSRTPR 19 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 TSQEELLAEVVQGQS(0.558)RT(0.442)PR 78.202 9.604700000000001e-05 5881800.0 1116.2 597.31 904.58 687.07 1190.3 1022.2 583.85 784.54 1044.0 1128.8 1142.5 True False 1304.5872715300736 627.7105276827123 1032.863046067519 855.4021808437441 1015.2084467808752 1130.3685255185553 689.9279875231882 895.7509475529839 807.5356669254215 873.8032960143519 858.7857186041108 1.5191068543275015 0.730927999947422 1.2027017027557902 0.9960600907920705 1.1821440724829675 1.3162404788890543 0.8033761770568476 1.0430435999901781 0.9403226549202609 1.0174869901593742 1.0 9.746154389506177 -7.765440270014358 24.999944389518557 0.9660934377126622 1.1342444222323187 0.20104942611510412 0.19231482840461767 136.147744882595 850733.0738350715 0.02675170768896156 0.03770343339836054 1.7161677242291096e-08 7.765440270014358 0.1681509845196565 TSQEELLAEVVQGQSRT(ph)PR ddPTM_A549_MK2206_60min_R1 1 TSQEELLAEVVQGQSRTPR 19 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 TSQEELLAEVVQGQS(0.06)RT(0.94)PR 86.791 2.8029000000000003e-06 6840600.0 820.59 866.43 915.71 1118.2 1198.0 1238.3 1000.3 806.84 1283.3 998.67 1431.1 True False 959.0855305006842 910.5275861782537 1045.5714474280749 1392.1590501979053 1021.7757869810038 1369.3360840829848 1182.0415619070745 921.2120408438694 992.6345990089976 773.069753393562 1075.7183736493157 0.8915767862614813 0.8464367705176762 0.9719750754847023 1.294166841712559 0.9498543596635663 1.2729503535740374 1.0988392416288877 0.8563691607485592 0.9227643808309596 0.7186544102346836 1.0 10.071084710028476 -8.24132204673907 24.7752685892109 0.9544716522452443 1.0504916016223877 0.1589930808263863 0.15453745322729803 1404.4410476081937 1729624.895112185 0.02264446374660872 0.02921404978533734 5.7369088968312905e-09 8.24132204673907 0.09601994937714342 TSQEELLAEVVQGQSRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 TSQEELLAEVVQGQSRTPR 19 1 Q6PJT7;Q6PJT7-5;Q6PJT7-2;H0YJA2;Q6PJT7-9;Q6PJT7-4;G3V256;Q6PJT7-11;Q6PJT7-3;Q6PJT7-10;G3V5I6;A0A087WTC9 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 TSQEELLAEVVQGQS(0.047)RT(0.953)PR;TSQEELLAEVVQGQS(0.007)RT(0.993)PR 176.65 7.278299999999999e-35 20482900.0 2251.4 2050.52 2048.3 2267.1000000000004 2404.8 2634.3 2655.6000000000004 2222.9 2630.8 2303.8999999999996 2243.88 True False 2479.96047060692 2223.3245167005666 2187.3099554285027 2407.13361804233 2235.8951441096224 2612.84713419938 2756.6603112000785 2178.5625156686842 2520.23662485344 2158.4313608139646 1967.8969851272745 1.2602084811093541 1.129797206613827 1.1114961666995173 1.2232010294414104 1.1361850549128287 1.327735726995076 1.4008153536663863 1.1070510967461973 1.280675077964227 1.0968213159157654 1.0 10.942438985554746 -10.856338080632597 1.0147142175793686 0.9953356806349156 1.2210536239026237 0.31529881480889055 0.09401212060280743 0.42602044607572276 0.7515956637475145 0.07131800004299527 0.01594910599206851 1.3920727089181137e-11 10.856338080632597 0.2257179432677081 TSQEGS(ph)S(ph)DDAER ddPTM_A549_PD325901_60min_R1 1 TSQEGSSDDAER 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 2 T(0.015)S(0.015)QEGS(0.985)S(0.985)DDAER 58.37 0.014124000000000001 4074700.0 569.7 648.78 550.85 512.08 580.6 490.7 458.32 648.86 651.3 548.26 789.7 True False 627.5355246090267 703.4549674936081 588.2339935301421 543.7100185819396 539.8206589612635 486.70390189106666 475.76161840232703 635.9179782791771 623.9281259567603 513.6427700333631 692.5719063207524 0.9060943981149514 1.0157139801275963 0.8493471770391333 0.7850593037629365 0.7794434831020348 0.702748548488853 0.6869490576506094 0.9181977675898724 0.9008856990335369 0.7416454022255395 1.0 9.435820056614274 -9.238897495338271 1.0706784347601768 0.9743525835174045 0.8250768871072836 0.0 0.11443462671797515 0.4160159147840854 0.9976385880691241 0.025204882940228227 0.021229099829584368 5.769026111705595e-10 9.238897495338271 -0.14927569641012095 TSQEGS(ph)SDDAER ddPTM_A549_MK2206_60min_R1 2 TSQEGSSDDAER 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 T(0.001)S(0.001)QEGS(0.499)S(0.499)DDAER;T(0.001)S(0.008)QEGS(0.496)S(0.496)DDAER 69.602 0.0035339 56751000.0 700.4100000000001 820.9300000000001 764.62 489.47 368.76 161.65 0.0 0.0 0.0 1048.27 945.79 True False 818.622084619584 862.7118305244668 873.0546135047719 609.3901719731435 314.5158924934183 178.7556957054143 0.0 0.0 0.0 811.4650789448663 710.9242405239227 1.1514899028007435 1.2135074053582457 1.2280557670411767 0.8571801849435425 0.4424042317949838 0.25144127252388876 0.0 0.0 0.0 1.1414227180477754 1.0 9.473552017349544 -6.573788004223611 2.6039529097315275 0.40870106948395013 1.1976254644685786 0.4890567559978042 0.3592084093178221 0.21952295800808375 2.9970754686847068 0.06225018027289193 0.14897909501637685 2.668160778194895e-07 6.573788004223611 0.7889243949846285 TSQEGS(ph)SDDAER ddPTM_A549_PD325901_60min_R1 1 TSQEGSSDDAER 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 TSQEGS(0.5)S(0.5)DDAER 189.99 1.4148e-19 62364000.0 1000.4 1103.9 1400.8 1102.1 1476.8 959.95 1351.7 1209.8 1257.8 1045.2 1262.6 True False 1101.9598715444438 1196.9295271373874 1495.8667116946967 1170.1742139492967 1373.074662683421 952.1324854704086 1403.139683178622 1185.6695899302597 1204.9390401173234 979.2058936250525 1107.3082042808426 0.995169969195819 1.0809362041300423 1.3509036652231878 1.0567737233639332 1.2400112790414881 0.8598622152256019 1.2671627264695573 1.070767456925247 1.0881695226848687 0.8843119646720328 1.0 10.1128411173519 -10.15158503957577 0.38737652364199965 0.9787287222379498 1.1294021222942028 0.17255086117753515 0.13296944415996045 2.8804631974141848 0.7446997225765841 0.1749747366977424 0.04412132470616183 7.053667120650843e-11 10.15158503957577 0.15067340005625296 TSQEGSS(ph)DDAER ddPTM_A549_PD325901_60min_R1 1 TSQEGSSDDAER 12 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 TSQEGS(0.372)S(0.628)DDAER 105.0 0.00016965 67452000.0 303.26 754.9 572.13 683.66 610.15 795.44 794.74 871.52 785.24 727.06 852.55 True False 334.04673195178736 818.5180723217806 610.9581822971774 725.8881254954867 567.295168903229 788.9622003672912 824.9842655984149 854.1368499057863 752.2390935456565 681.1533075191638 747.6917547597277 0.44677065090698237 1.094726626462282 0.817125745212357 0.9708387458796471 0.7587286676519931 1.0551971388541337 1.103374833742182 1.14236494446868 1.0060818362072081 0.9110081837642491 1.0 9.546299813451432 -7.2719758675095 24.72565633168593 1.0262088275551156 0.8415145787702033 0.3129541533439981 0.1591918595380349 609.5055992389294 1430307.0409139679 0.02116570407606306 0.03405764156435107 5.345940644203765e-08 7.2719758675095 -0.18469424878491225 TSQLGDS(ph)PFYPGK ddPTM_A549_MK2206_60min_R1 1 TSQLGDSPFYPGK 13 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 TSQLGDS(1)PFYPGK 178.67 2.4653999999999997e-22 12386000.0 3019.6 3816.2 4412.4 4109.6 5783.3 3863.1 3940.9 4250.2 6278.6 5860.9 6069.0 True False 3529.2346578679553 4010.4282796919 5038.144668761549 5116.452184486958 4932.584231091185 4271.890677881756 4656.910518164139 4852.678865691602 4856.507124863935 4536.918619428168 4561.899804121095 0.7736326551231444 0.8791136263161653 1.1043961693788686 1.1215617186210216 1.081256591088481 0.9364279930091072 1.0208270058797024 1.0637407821425244 1.0645799630401132 0.9945239514751377 1.0 12.155419044840185 -5.582419748750166 4.345360832286983 1.0392637548728532 0.7935754129485341 0.7344153837941645 0.05170488651272258 0.07407840810276932 2.7648962080444406 0.007470086537908297 0.03396938513495562 2.6156537379274062e-06 5.582419748750166 -0.2456883419243191 TSQLGDS(ph)PFYPGK ddPTM_A549_PD325901_60min_R1 1 TSQLGDSPFYPGK 13 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 TSQLGDS(1)PFYPGK 214.89 1.3725999999999998e-37 25894000.0 8388.6 8951.9 8482.0 8077.8 10337.0 10224.0 9061.2 9194.2 9758.9 9680.9 9958.0 True False 9240.204496639066 9706.308029695781 9057.63952640949 8576.74735998515 9610.96478071406 10140.739133756402 9406.028924478902 9010.814468289636 9348.767370488902 9069.646321847273 8733.229128962963 1.058051307275881 1.1114225776472175 1.037146671941842 0.9820820263997362 1.100505281470306 1.1611671907388252 1.0770390637392828 1.0317849600906597 1.0704823190181239 1.0385215122512488 1.0 13.092299476542324 -10.616025112929277 0.6235461569508267 0.9927162352346814 1.0718771437870958 0.13963249236099362 0.045413896433015855 1.1838482917828579 0.7059750590066798 0.05117945970230069 0.009874730201996003 2.420889055610453e-11 10.616025112929277 0.07916090855241431 TSQLT(ph)PQR ddPTM_A549_PD325901_60min_R1 1 TSQLTPQR 8 0 E9PIM8;E9PKW0;E9PMR8;E9PRT0;E9PSB9;E9PR06;A0A5F9ZH13;Q9NQC8;Q9NQC8-2 E9PIM8 IFT46 Intraflagellar transport protein 46 homolog 1 TSQLT(0.999)PQR 70.977 0.006721899999999999 12401000.0 6747.5 7214.9 5876.6 6015.7 7156.0 5994.4 6049.9 6185.2 6114.8 7581.5 7677.2 True False 7432.501232753041 7822.924943693747 6275.421414866544 6387.276126354033 6653.387246859803 5945.583593836985 6280.132255132306 6061.83133380447 5857.816220789798 7102.802796133116 6732.953069780524 1.1038991592132574 1.1618861534629341 0.9320459165284374 0.9486589406098803 0.9881826262419924 0.8830573349044292 0.9327455857845481 0.9003228258060723 0.8700218403543316 1.0549312794132766 1.0 12.717023693612253 -5.766120075627546 24.99560891119807 0.9344733257609537 1.132892685687143 0.6410175113148568 0.0535501235820084 42.469663699018014 226800.12050891717 0.007125721515296097 0.023257327464996484 1.713483490640791e-06 5.766120075627546 0.19841935992618942 TSQVGAAS(ph)APAKESPRK ddPTM_A549_MK2206_60min_R1 1 TSQVGAASAPAKESPRK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAAS(0.974)APAKES(0.026)PRK 63.184 0.0006123999999999999 2534900.0 333.19 1152.4 606.67 1103.2 561.85 574.9 831.15 502.05 1338.4 1068.1 922.07 True False 389.42432628660225 1211.0522377016257 692.7049284284224 1373.4840495245294 479.20260927819425 635.7355364122651 982.1591964201385 573.2171249636416 1035.2545369856164 826.8154681723327 693.0945711626196 0.5618631893673169 1.747311677351861 0.9994378216907058 1.9816690343146133 0.6913957044481882 0.9172421237492331 1.417063756209535 0.8270402753293946 1.4936699550958052 1.1929331184709833 1.0 9.436908407993805 -11.27341804107967 1.8006781018584037 0.9993516539725192 1.2428040523352128 0.0 0.4298909805755251 1.0537166664908604 6.161315799273443 0.2955780611931195 0.05911403266787693 5.328217675678795e-12 11.27341804107967 0.2434523983626936 TSQVGAASAPAKES(ph)PR ddPTM_A549_MK2206_60min_R1 7 TSQVGAASAPAKESPR 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAAS(0.002)APAKES(0.998)PR;TSQVGAAS(0.004)APAKES(0.996)PR 238.72 2.4329e-65 3829942600.0 27575.360000000004 29161.489999999998 28084.91 25830.89 39040.51 26455.089999999997 26877.460000000006 26323.640000000003 38353.98 39914.01 41109.5 True False 32229.406615176096 30645.685282205457 32067.772547626657 32159.459209592715 33297.70269565088 29254.55006433251 31760.74657452257 30055.09658276651 29666.864768720567 30897.407419516145 30900.876585519203 1.0429932796883656 0.9917416160474446 1.0377625521035958 1.040729673819781 1.0775649876306381 0.9467223359625275 1.0278267183334961 0.9726292553412855 0.9600654753795262 0.9998877324404226 1.0 14.915360144140063 -7.265879175628397 24.981023288122564 0.9817326974973818 1.0357005647410544 0.48246778403163404 0.027524821759574148 257.15364116302953 1446902.2184078626 0.004162846978802067 0.0067816058863828035 5.4215170057782934e-08 7.265879175628397 0.05396786724367264 TSQVGAASAPAKES(ph)PR ddPTM_A549_PD325901_60min_R1 12 TSQVGAASAPAKESPR 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAASAPAKES(1)PR;TSQVGAAS(0.001)APAKES(0.999)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAAS(0.004)APAKES(0.996)PR;TSQVGAAS(0.001)APAKES(0.999)PR;TSQVGAASAPAKES(1)PR;TSQVGAAS(0.014)APAKES(0.986)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAAS(0.009)APAKES(0.991)PR;TSQVGAASAPAKES(1)PR 286.46 1.1661999999999998e-107 6292466700.0 64087.439999999995 65334.22000000001 59380.8 65075.149999999994 69433.42000000001 62915.530000000006 63512.43999999999 63013.99 73046.84 69108.64000000001 73576.40000000001 True False 70593.5497301203 70840.16400986498 63410.738173758175 69094.69421911126 64556.656111495344 62403.16678325746 65929.44065954072 61757.126535931115 69976.93534202864 64745.10867624571 64526.96923922774 1.0940162007051852 1.0978380798768288 0.9827013250640791 1.0707878431876927 1.0004600692178418 0.967086592148835 1.0217346550883777 0.957074650553822 1.0844602833056618 1.0033805932556548 1.0 15.977614644823621 -5.7380063256339024 24.733406702821135 1.0256160727714336 1.0959272464556238 0.364007638991771 0.03962807602297544 209.69187935022137 221324.2107491611 0.006105307507399101 0.023616490392148415 1.828073589489698e-06 5.7380063256339024 0.07031117368419015 TSQVGAASAPAKES(ph)PRK ddPTM_A549_MK2206_60min_R1 7 TSQVGAASAPAKESPRK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAASAPAKES(1)PRK;TSQVGAASAPAKES(1)PRK;T(0.001)S(0.001)QVGAAS(0.018)APAKES(0.98)PRK;TSQVGAAS(0.003)APAKES(0.997)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAAS(0.006)APAKES(0.994)PRK;TSQVGAAS(0.006)APAKES(0.994)PRK 133.68 6.5309e-13 1398336200.0 14104.92 16663.33 15361.44 16111.53 22222.530000000002 15886.199999999999 15624.45 17398.64 22801.100000000002 22559.329999999998 24086.510000000002 True False 16485.485663814696 17511.42232216299 17539.92318024215 20058.855573274075 18953.625275007493 17567.267139593885 18463.210318843336 19864.950501100313 17636.68725587474 17463.161684864866 18105.16481314233 0.910540491288324 0.9672059052150495 0.9687800890666358 1.1079079246333943 1.046862896340456 0.9702903740949106 1.0197758766294744 1.0971979932864557 0.9741246455305653 0.9645403322806848 1.0 14.144113689421859 -5.529532506814642 2.0536880493952485 1.0071115906295085 0.9100354524448725 0.30155286939786907 0.048124124054 0.46842163570913486 3.102752682821016 0.006952235646130496 0.06860521101998701 2.95438774514664e-06 5.529532506814642 -0.09707613818463601 TSQVGAASAPAKES(ph)PRK ddPTM_A549_PD325901_60min_R1 7 TSQVGAASAPAKESPRK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAAS(0.001)APAKES(0.999)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAAS(0.103)APAKES(0.896)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAAS(0.265)APAKES(0.735)PRK;TSQVGAAS(0.018)APAKES(0.982)PRK 208.46 1.494e-55 2029008200.0 28676.780000000002 28507.76 28046.63 32692.93 33144.47 31231.000000000004 32804.14 32862.06 37566.5 33677.14 34486.189999999995 True False 31588.025594870334 30910.208983192428 29950.042969887094 34712.29803506883 30816.516769414113 30976.665090605053 34052.51949881417 32206.60043351266 35987.710646022766 31550.759633023314 30244.607255970182 1.0444184421880687 1.0220072861779634 0.9902606013829145 1.1477185913272767 1.0189094706571544 1.0242045740068377 1.1259038416540297 1.0648708432857956 1.1898885094273761 1.0431862899061222 1.0 14.884390306113913 -7.7499270850916595 24.974446239528916 1.0921633663528385 1.0418842184074655 0.11551465253768856 0.05833616282882819 430.6322902380873 934198.1423945011 0.01160147960374362 0.01712856254822015 1.7785779953789327e-08 7.7499270850916595 -0.050279147945373026 TSQVGAASAPAKES(ph)PRKGAAPAPPGK ddPTM_A549_MK2206_60min_R1 2 TSQVGAASAPAKESPRKGAAPAPPGK 26 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 T(0.005)S(0.005)QVGAAS(0.064)APAKES(0.926)PRKGAAPAPPGK;TSQVGAAS(0.022)APAKES(0.977)PRKGAAPAPPGK 88.544 3.3576999999999997e-09 35596000.0 1418.1399999999999 1822.94 1951.7799999999997 1660.74 2408.9 1517.48 1225.53 983.84 2722.1000000000004 2288.43 2331.73 True False 1657.4873618058225 1915.7198595937198 2228.571752695906 2067.621374553453 2054.5540010505333 1678.0587263783004 1448.1929374827316 1123.3023328836364 2105.5486963004687 1771.47207361634 1752.6970885258318 0.9456781623343206 1.0930125188973778 1.2715099302015305 1.1796798135224265 1.172224233440468 0.9574151388530527 0.8262653866223888 0.6408992975668316 1.2013192182976782 1.0107120535621472 1.0 10.77536096721552 -7.247966564015655 23.637819745923252 1.0284302086872048 1.1405842401465351 0.15765076392711008 0.16153506062758063 862.4720604517278 1513189.1711507766 0.0277255072171417 0.047815742865834655 5.649804705318762e-08 7.247966564015655 0.11215403145933034 TSQVGAASAPAKES(ph)PRKGAAPAPPGK ddPTM_A549_PD325901_60min_R1 2 TSQVGAASAPAKESPRKGAAPAPPGK 26 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAAS(0.188)APAKES(0.812)PRKGAAPAPPGK;TSQVGAAS(0.061)APAKES(0.938)PRKGAAPAPPGK 93.04299999999999 2.0654e-09 78238000.0 1312.36 1428.13 1797.77 1825.62 1927.11 3539.3999999999996 3002.2 2938.3 2411.05 1847.58 1849.19 True False 1445.5898210916298 1548.4835271226702 1919.7774830692274 1938.3844011161543 1791.756441768586 3510.5762998843297 3116.450363866876 2879.6933014482433 2309.7219531522296 1730.9234834900237 1621.7513529812236 0.8913757453842966 0.9548217883562317 1.1837680785899454 1.195241426839492 1.1048280850667067 2.16468220817632 1.9216573232006164 1.7756688139365986 1.4242145991778132 1.067317428351832 1.0 10.663336927078468 -6.052276443147831 1.3508956398647312 1.3671338080421025 0.8932280655523726 0.2360774829524287 0.3589499243110629 0.8112742466491736 2.5555330322517738 0.06300171322928765 0.34943752846593934 8.86591486875964e-07 6.052276443147831 -0.47390574248972994 TSQVGAASAPAKESPR ddPTM_A549_MK2206_60min_R1 3 TSQVGAASAPAKESPR 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 0 ;; 65.467 0.0028258000000000003 7220100.0 2008.52 2512.67 1804.2700000000002 1855.04 2526.55 1799.4399999999998 1755.5300000000002 1949.37 2940.6000000000004 3109.5 3832.2 False True 2347.509072400631 2640.5541705186956 2060.14261660466 2309.52488327591 2154.897841900546 1989.8555464283986 2074.4870770516113 2225.699167195248 2274.5587951732705 2407.061790358459 2880.5589766605444 0.8149491440449927 0.9166811691458273 0.7151884871293279 0.8017627488236193 0.7480832225135473 0.6907879903001516 0.7201682360472207 0.7726622454977538 0.7896241019894635 0.8356231585124444 1.0 11.492133080567989 -10.405853826009293 0.731454755653334 1.0029140148618498 0.7716232348008429 0.27573123699683977 0.07443604239815095 0.33946257598960067 0.32519929942603504 0.0437333810737382 0.012499317028925821 3.9277711330992215e-11 10.405853826009293 -0.2312907800610069 TSQVGAASAPAKESPR ddPTM_A549_PD325901_60min_R1 2 TSQVGAASAPAKESPR 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 0 ; 181.41 6.046099999999999e-34 21027500.0 4987.7 5219.700000000001 4994.7 5192.8 5369.5 5033.799999999999 5034.7 5611.4 6261.799999999999 6033.0 7064.9 False True 5494.047632249324 5659.582437538746 5333.670377571033 5513.547462295534 4992.364843769384 4992.806401751071 5226.298263593552 5499.476224941862 5998.638321996068 5652.075350401778 6195.962088091023 0.8867142106645848 0.9134307726667295 0.8608300537898123 0.8898613942284884 0.8057448984984884 0.8058161639412734 0.8435006846860446 0.8875903607467441 0.9681528448222396 0.9122191630683756 1.0 12.597112601241085 -8.740540136227569 2.459794465044244 0.9871792110217955 0.8573909861931162 0.5480567981090501 0.038694492324010316 0.10389345253457345 1.2396528113354286 0.006396122926011604 0.006977863431348991 1.8174390859218554e-09 8.740540136227569 -0.12978822482867935 TSRDT(ph)SPSSGSAVSSSK ddPTM_A549_MK2206_60min_R1 2 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 1 T(0.088)S(0.088)RDT(0.41)S(0.41)PS(0.004)S(0.001)GSAVSSSK;T(0.065)S(0.065)RDT(0.395)S(0.395)PS(0.065)S(0.012)GS(0.003)AVSSSK 67.866 0.00073952 15010400.0 1729.54 1539.76 1914.42 1461.93 2737.0 1458.13 1381.8600000000001 1078.67 3140.1 4057.8 4610.5 True False 2021.4440688067764 1618.1272071532933 2185.9135429177973 1820.1029156285315 2334.3909256819766 1612.4283487716416 1632.9260749144353 1231.5747757883305 2428.872363709306 3141.140161735504 3465.5856066733063 0.5832907618597846 0.46691306774746505 0.6307486788693426 0.5251934657518644 0.6735920535873909 0.46526865349012336 0.4711833035577262 0.3553727755034587 0.700854816292025 0.906380773190813 1.0 11.758883440908821 -9.666823232277546 0.904581795509095 0.9549048686959813 0.5283652603794662 0.7326580038583578 0.09681581349021334 0.17422326128120524 0.2987793800368561 0.033679777784208845 0.021085266785674465 2.15365814415448e-10 9.666823232277546 -0.42653960831651516 down TSRDT(ph)SPSSGSAVSSSK ddPTM_A549_PD325901_60min_R1 1 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 1 T(0.108)S(0.108)RDT(0.465)S(0.319)PSSGSAVSSSK 96.016 1.0252e-06 20022000.0 2115.2 1940.9 2021.5 2677.0 2456.2 3520.1 3263.0 3340.2 3050.0 2858.1 2985.6 True False 2329.933546872059 2104.4664545891414 2158.6911462670096 2842.3522100918835 2283.684985429995 3491.433472685436 3387.1752505821137 3273.577090663793 2921.8191066607046 2677.6390782336016 2618.3901272777466 0.8898343767032203 0.8037253244523518 0.8244344965168843 1.0855342679767064 0.8721714009074218 1.3334275272093863 1.2936098464836665 1.250225112201757 1.1158837929542695 1.0226280073158747 1.0 11.35446435244067 -6.273241023585472 6.7393567847593765 1.0955779973068762 0.8351857803347703 0.4716254695873495 0.1309721027028885 0.11564524216930423 28.826971397645323 0.02008859590767702 0.04913149027957027 5.330389888376787e-07 6.273241023585472 -0.2603922169721059 TSRDTS(ph)PSSGSAVSSSK ddPTM_A549_PD325901_60min_R1 1 TSRDTSPSSGSAVSSSK 17 1 B7Z8L1;F8W0Q9;Q8NEY8-5;Q8NEY8-6;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8;F8WF16;F8W6A0;Q8NEY8-9;Q8NEY8-7 B7Z8L1 PPHLN1 Periphilin-1 1 T(0.049)S(0.049)RDT(0.258)S(0.642)PS(0.003)SGSAVSSSK 100.85 4.8351e-09 23826000.0 1999.3 2011.9 2062.8 1857.7 2061.4 3763.6 3003.4 2897.6 2762.2 3270.3 3268.2 True False 2202.267464193131 2181.449873763665 2202.7940126240846 1972.4459098571901 1916.6143754439343 3732.9504894176007 3117.696030523543 2839.805094876776 2646.114339809247 3063.812699887109 2866.2321188267456 0.7683493076948005 0.7610862565648078 0.7685330152275907 0.6881668434671596 0.6686877740482774 1.3023894557938436 1.0877332683717642 0.9907798730687635 0.9232030868778344 1.0689339079562197 1.0 11.484939734150512 -7.207139172359076 24.99999076797832 0.9966436572792069 0.732347440232551 0.6916671974361568 0.10526115166446931 173.46017905722437 79861.56304443268 0.01621543797527111 0.02808595093698677 6.206701047748415e-08 7.207139172359076 -0.26429621704665585 TSRPENAIIYNNNEDFQVGQAK ddPTM_A549_MK2206_60min_R1 2 TSRPENAIIYNNNEDFQVGQAK 22 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 214.35 3.0555999999999994e-73 37102000.0 4298.0 5330.0 4349.1 4371.6 5829.1 4423.3 5147.3 4697.200000000001 6786.2 7144.9 7269.5 False True 5023.3973239887655 5601.274233729317 4965.867776926584 5442.642196248584 4971.647111762079 4891.370670051095 6082.4977822696055 5363.042484571691 5249.136535334574 5530.862127651442 5464.282522006641 0.9193150800233569 1.0250703932622371 0.9087867907501561 0.9960396766325856 0.9098444474163733 0.8951533253179675 1.1131374993465635 0.9814724006258425 0.9606268552539887 1.0121845101121074 1.0 12.415816362462998 TSRPENAIIYNNNEDFQVGQAK ddPTM_A549_PD325901_60min_R1 4 TSRPENAIIYNNNEDFQVGQAK 22 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ;;; 206.34 3.332399999999999e-61 59047300.0 13023.2 11720.3 11746.5 12588.5 15046.0 12212.5 11831.8 12048.900000000001 13921.600000000002 13850.800000000001 13803.0 False True 14345.305676826885 12708.01081339643 12543.688127442718 13366.063054442164 13989.220865882135 12113.045449041469 12282.065623609387 11808.575237320807 13336.52356566809 12976.258124207683 12105.318504426159 1.1850415725601686 1.0497873978904317 1.0362129772014073 1.1041479866519026 1.1556260052775273 1.0006383098976275 1.0146007822196998 0.9754865378389795 1.1017077791709287 1.0719468570333839 1.0 13.563353418300675 -7.273077078510205 24.940534591964216 1.0373542556285686 1.0990331231308397 0.35324716686237234 0.051720090743423916 876.0586029517398 1877464.3042485984 0.00863771792457032 0.013876882205968628 5.332402477010743e-08 7.273077078510205 0.06167886750227103 TSRRS(ph)EDLDNATEVNPK ddPTM_A549_MK2206_60min_R1 2 TSRRSEDLDNATEVNPK 17 2 O95171-2;O95171;O95171-3 O95171-2 SCEL Sciellin 1 T(0.2)S(0.2)RRS(0.601)EDLDNATEVNPK;T(0.151)S(0.151)RRS(0.698)EDLDNATEVNPK 109.85 2.1089e-09 12683700.0 3441.3 4773.6 4549.7 4013.5 5315.9 3749.5 3142.4 3591.2 5081.5 5338.8 6053.6 True False 4022.107308292818 5016.555850305867 5194.915873326177 4996.807680172861 4533.938151930146 4146.269601283335 3713.3334041155563 4100.263597588747 3930.5483634880543 4132.761372042369 4550.32404913947 0.8839166760119984 1.1024612304819408 1.1416584439318356 1.0981212823991793 0.9963989603746083 0.9112031487224416 0.8160591122774651 0.901092659184166 0.8637952640386954 0.908234518555647 1.0 12.151753574465637 -7.0329478239584 3.6361943970062978 0.9201416568312031 1.0652781590157883 0.4767083299854298 0.07531306689660752 0.1880326378324694 5.219484146335705 0.01252491950135919 0.02329102687532258 9.26941179195346e-08 7.0329478239584 0.14513650218458518 TSS(ph)AELSTSAPDEPLLQK ddPTM_A549_MK2206_60min_R1 2 TSSAELSTSAPDEPLLQK 18 0 Q15139 Q15139 PRKD1 Serine/threonine-protein kinase D1 1 T(0.145)S(0.145)S(0.699)AELS(0.008)T(0.002)SAPDEPLLQK;T(0.112)S(0.112)S(0.762)AELS(0.007)T(0.007)S(0.001)APDEPLLQK 110.97 2.1481999999999997e-09 26413000.0 4328.2 5334.1 4105.6 4189.1 6259.5 5208.3 5037.1 4629.6 7355.400000000001 7127.1 7249.700000000001 True False 5058.694345669651 5605.582906216799 4687.835815444523 5215.429688055842 5338.735841909509 5759.4388490102665 5952.275868721508 5285.859977555377 5689.413644160197 5517.08316001408 5449.399408458842 0.928303096634334 1.02866068093954 0.8602481602225411 0.957065044628621 0.979692520541336 1.0568942405047728 1.0922810795409996 0.9699894578016045 1.0440441629822164 1.0124204057148345 1.0 12.411881520389416 -6.972911990835812 3.372840622651429 1.0251945556854993 0.9441200381254511 0.41926565005652494 0.047114085089020666 0.18884137368148368 4.508026482223479 0.006756951830180778 0.013030700681658423 1.0643586871577557e-07 6.972911990835812 -0.08107451756004824 TSS(ph)AELSTSAPDEPLLQK ddPTM_A549_PD325901_60min_R1 2 TSSAELSTSAPDEPLLQK 18 0 Q15139 Q15139 PRKD1 Serine/threonine-protein kinase D1 1 T(0.029)S(0.029)S(0.943)AELSTSAPDEPLLQK;T(0.058)S(0.058)S(0.883)AELSTSAPDEPLLQK 250.52 1.999e-86 9464600.0 5303.9 5214.4 4913.4 5940.200000000001 6070.4 5123.799999999999 5630.5 5529.5 5079.1 5899.6 6114.1 True False 5842.348023475185 5653.835787938388 5246.852870674412 6307.112662826975 5644.036045743116 5082.0734715904755 5844.771758627822 5419.209784691168 4865.643090046028 5527.098249167963 5362.1044604732315 1.0895625153411446 1.0544061253591115 0.978506276659025 1.1762383051877996 1.052578532803332 0.9477759169096751 1.090014527264915 1.0106497970412343 0.9074129618162291 1.030770342113061 1.0 12.38858360975256 -8.536965822634276 7.776886896860796 0.9563320488709728 1.0528165953932442 0.19839174563568585 0.06351012055938021 0.13249186367632396 45.83921014831706 0.010534911306374581 0.012078065918473149 2.904251199274361e-09 8.536965822634276 0.09648454652227145 TSS(ph)ASRPASLPR ddPTM_A549_PD325901_60min_R1 1 TSSASRPASLPR 12 1 Q69YQ0-2;Q69YQ0;A0A494C1J1 Q69YQ0-2 SPECC1L Cytospin-A 1 T(0.251)S(0.251)S(0.486)AS(0.012)RPASLPR 79.036 0.00026132 19390000.0 3275.2 2973.5 3156.5 3777.6 4364.6 3671.3 3525.6 3497.4 3307.2 3918.3 3972.8 True False 3607.6958929251955 3224.0872804991563 3370.719071576464 4010.9337724479265 4058.0455530525874 3641.402150015635 3659.7686372823446 3427.6416133427783 3168.2098850978005 3670.8978692987394 3484.1707856541525 1.0354532297267545 0.925352825347749 0.9674379583960642 1.1511874759304814 1.1647091381861439 1.0451273413487285 1.050398749783221 0.9837754301413325 0.909315323503285 1.0535929766742271 1.0 11.766599627765753 -8.361801025233614 3.861122029626155 0.956811393443344 1.0490638866794486 0.10188420339023518 0.07360633069123138 0.268737305308477 7.291203504730314 0.012899225324174219 0.015739521016136754 4.3470934339202615e-09 8.361801025233614 0.09225249323610463 TSS(ph)DPNLNNHCQEVR ddPTM_A549_MK2206_60min_R1 1 TSSDPNLNNHCQEVR 15 0 J3QR65;Q9NYA4 J3QR65 MTMR4 Myotubularin-related protein 4 1 T(0.208)S(0.208)S(0.584)DPNLNNHCQEVR 100.97 2.2469e-06 6361900.0 633.58 602.1 445.06 320.43 637.01 719.81 304.84 421.27 877.99 751.52 1049.0 True False 740.5128144562123 632.7443182229686 508.17620031706423 398.9353643846492 543.3066728420442 795.979816428792 360.22548208712647 480.98631258526717 679.1266668619257 581.7511100466924 788.5043490728337 0.9391359924988968 0.8024614182115593 0.6444811635022755 0.5059393329329623 0.6890344656702195 1.0094805657885695 0.45684653801935166 0.6099983001372624 0.861284617720219 0.7377906167933593 1.0 9.622974902138013 -9.073612525364405 2.429068586347436 0.948796832284254 0.7038500773889477 0.10110495635112882 0.17171796216366486 0.23989475421087558 2.9099943817260585 0.03152831599364815 0.030863150907644885 8.440875111523756e-10 9.073612525364405 -0.24494675489530637 TSS(ph)DPVLLK ddPTM_A549_MK2206_60min_R1 2 TSSDPVLLK 9 0 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.095)S(0.01)S(0.894)DPVLLK;T(0.253)S(0.033)S(0.714)DPVLLK 201.84 1.6681e-16 52506000.0 19948.2 20382.5 19623.1 16441.4 25864.0 19600.4 19624.4 18647.1 26612.0 29236.0 28875.0 True False 23314.968473334713 21419.882189303535 22405.950650343308 20469.543738082495 22059.439861833624 21674.501318307477 23189.899457651896 21290.38352934872 20584.424490631514 22631.567294716173 21704.54059054154 1.074197741070593 0.9868848455902332 1.0323162822486753 0.9430996087059667 1.0163513837029448 0.9986159913356032 1.068435397695432 0.9809184138468565 0.9483925450880931 1.0427111875649935 1.0 14.40570926563889 -8.492737138350542 24.8339248373875 0.9750522107922703 1.013797347254233 0.00782879443477269 0.04139256832036298 780.4840748152162 643048.4152586879 0.006015171386588344 0.007266586509019389 3.215606231812712e-09 8.492737138350542 0.03874513646196265 TSS(ph)DPVLLK ddPTM_A549_PD325901_60min_R1 2 TSSDPVLLK 9 0 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.002)S(0.016)S(0.982)DPVLLK;T(0.018)S(0.018)S(0.963)DPVLLK 190.57 1.7250999999999997e-11 94021000.0 21476.0 22346.2 22171.0 23889.0 25793.0 21959.0 24076.0 24867.0 26310.0 24904.0 27687.0 True False 23656.227710204395 24229.39269799571 23675.65738505361 25364.569274144593 23981.388661019417 21780.173184483258 24992.225354892715 24371.008177215892 25204.28219548957 23331.557189856758 24281.674522353627 0.9742420230707958 0.9978468608369746 0.97504220161002 1.0445972023384984 0.9876332309348036 0.8969798670364559 1.0292628431323778 1.0036790565980127 1.0379960481014847 0.9608710127622296 1.0 14.567580296274551 TSS(ph)EASMDAAYLDK ddPTM_A549_MK2206_60min_R1 2 TSSEASMDAAYLDK 14 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 T(0.003)S(0.194)S(0.793)EAS(0.01)MDAAYLDK;T(0.004)S(0.023)S(0.974)EASMDAAYLDK 205.26 1.6600999999999998e-76 3970900.0 1430.0 2040.7 1749.3 1644.7 3297.2 3091.3 2220.1 2629.0 3555.6 3228.0 3691.5 True False 1671.3490398566626 2144.5629134655564 1997.3770440269634 2047.6515738333887 2812.18624777443 3418.4193141611345 2623.463432560128 3001.6688009748323 2750.2622771264637 2498.792558056636 2774.798669782999 0.6023316423124022 0.772871537246798 0.7198277358923366 0.7379459980761501 1.013473978634405 1.2319521958068653 0.9454608224838503 1.081760934103942 0.9911574151581766 0.9005311215072958 1.0 11.438167382740062 -6.745821506113202 5.523810419598539 1.0180413080218214 0.710881597360128 0.7469692212350344 0.08832071363055034 0.061297166600096986 5.619114744359516 0.011378652103030521 0.02323944230758639 1.7954714092232414e-07 6.745821506113202 -0.30715971066169334 TSS(ph)EDNLYLAVLR ddPTM_A549_MK2206_60min_R1 4 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 T(0.014)S(0.023)S(0.962)EDNLYLAVLR;T(0.025)S(0.003)S(0.972)EDNLYLAVLR;TS(0.023)S(0.977)EDNLYLAVLR;T(0.011)S(0.003)S(0.986)EDNLYLAVLR 328.14 6.389199999999998e-157 3002531600.0 48048.83 50582.979999999996 48376.380000000005 46088.42 67964.9 56202.729999999996 49934.2 53288.81 81623.1 70482.8 68823.56 True False 56158.29782289229 53157.43762462392 55236.87811417434 57380.08496898781 57967.35324255854 62150.065584247175 59006.597781245895 60842.66200763624 63135.59817530685 54560.686527569495 51732.77061837479 1.085545915125327 1.027538965905358 1.0677347734117866 1.1091631915922782 1.1205151502550554 1.2013674280606248 1.1406038585586125 1.1760951768167185 1.2204178786604931 1.0546639175785855 1.0 15.658790838640915 -6.280585873549932 2.9272446100789358 1.1228758544026711 1.0547750600542207 0.19854558978469017 0.060537340711154866 0.49779579062405976 8.53418818306133 0.012216519930802087 0.03391993369247294 5.240999598713575e-07 6.280585873549932 -0.0681007943484504 TSS(ph)EDNLYLAVLR ddPTM_A549_PD325901_60min_R1 4 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 TS(0.002)S(0.998)EDNLYLAVLR;T(0.004)S(0.004)S(0.992)EDNLYLAVLR;T(0.005)S(0.034)S(0.96)EDNLYLAVLR;T(0.093)S(0.186)S(0.72)EDNLYLAVLR 277.31 3.2292e-98 1457806600.0 8499.5 9991.099999999999 10171.7 10333.7 11209.699999999999 10943.9 11739.4 11073.2 11712.7 11351.3 11158.6 True False 9362.362982998804 10833.085060768495 10862.012729401016 10971.98917946452 10422.369343365617 10854.776506838478 12186.149291046177 10852.33633924265 11220.455951011421 10634.57698077502 9786.162940193428 0.9566939606682814 1.1069798374473392 1.1099358140450422 1.1211737681579674 1.0650108124154751 1.1091963799474536 1.2452428357794452 1.1089470311872969 1.146563369073604 1.0866952702265984 1.0 13.256527588591023 -3.670045657240284 16.594902266158826 1.0878563615105874 0.4618038738170015 0.0 0.07168496088944835 0.0 0.0 0.01051718682797553 0.0 0.00021377373380442925 3.670045657240284 -0.6260524876935859 TSS(ph)EEEDSR ddPTM_A549_PD325901_60min_R1 1 TSSEEEDSR 9 0 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.108)S(0.108)S(0.766)EEEDS(0.018)R 54.982 0.018626 1973600.0 258.56 129.14 233.19 121.12 0.0 183.06 244.83 229.18 426.95 324.78 417.7 True False 284.8088208581883 140.02308101686944 249.01567568538428 128.6013073165219 0.0 181.56922005334957 254.14713962611665 224.60882511176808 409.0067762586192 304.2733353726982 366.3255480184602 0.7774746326014804 0.3822367338949924 0.6797660633618589 0.3510574351479338 0.0 0.49564989675303717 0.6937739969293909 0.6131399415812773 1.116511743368792 0.8306091044388884 1.0 8.516982509751704 -8.471846961594197 1.6480860987502428 1.0569556480432698 0.44589456042626147 0.49268570074512663 0.21438375594116624 0.1679779284617593 0.8881901864103177 0.03775230037898438 0.04518234464441487 3.3740618423729816e-09 8.471846961594197 -0.6110610876170084 TSS(ph)EEEDSRR ddPTM_A549_PD325901_60min_R1 1 TSSEEEDSRR 10 1 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.186)S(0.186)S(0.628)EEEDSRR 85.522 0.00034638 21462000.0 702.42 715.16 582.15 718.44 606.76 576.09 575.41 431.31 509.44 584.88 957.59 True False 773.7291613057265 775.4290430542385 621.6581997523323 762.8164071043761 564.1432708083639 571.3985140420306 597.3075424264338 422.7071836938506 488.03000842532145 547.9505769837548 839.8125006631494 0.9213117936381742 0.9233359141974296 0.74023451575375 0.9083175190914947 0.6717490753744364 0.6803881980690113 0.711239165831392 0.5033351889380834 0.581117818608265 0.65246775506565 1.0 9.713923452716063 -5.725461411229829 1.2291495291662755 0.755460521017966 0.9576201304608746 0.20257539933584334 0.13682058296470573 1.4340123419496165 2.9964967792673485 0.027212944357065002 0.2964344209555409 1.8816488906838343e-06 5.725461411229829 0.20215960944290856 TSS(ph)EEEDSRREEPSLLLVLK ddPTM_A549_PD325901_60min_R1 1 TSSEEEDSRREEPSLLLVLK 20 2 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.131)S(0.131)S(0.735)EEEDS(0.002)RREEPSLLLVLK 63.726000000000006 0.00063652 7657600.0 980.78 924.79 768.92 1034.5 1240.0 958.38 1029.8 802.15 794.53 994.26 1063.3 True False 1080.3480635879253 1002.7252988507877 821.1035350915804 1098.3987154800348 1152.90667776777 950.5752710298767 1068.989602528182 786.1504889754989 761.1386671525017 931.4822539185272 932.52084081405 1.1585243099176514 1.0752845995114193 0.8805203049132853 1.1778811447486586 1.2363334172363727 1.0193608865621342 1.146343926849936 0.8430379832468129 0.8162162536636296 0.998886258783647 1.0 9.864992158148599 -8.25937930005587 24.996958791913134 0.9055251620850813 1.095081776003492 0.42851855686251095 0.10231202788115404 141.51590153800763 1717152.3289041605 0.017997526491605065 0.02265839521006101 5.503268471375192e-09 8.25937930005587 0.18955661391841083 TSS(ph)FAEPGGGGGGGGGGPGGSASGPGGTGGGK ddPTM_A549_MK2206_60min_R1 1 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK 32 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 T(0.188)S(0.188)S(0.624)FAEPGGGGGGGGGGPGGSASGPGGTGGGK 142.17 2.4112e-40 18415000.0 2492.9 2726.6 2643.3 2590.5 4127.2 3726.6 3126.9 3788.2 5145.6 4328.6 4768.7 True False 2913.6405744466247 2865.3722937497864 3018.1596870042167 3225.172616291964 3520.0943472687823 4120.946338483124 3695.0172547508078 4325.188950875942 3980.1298158347204 3350.766253656737 3584.5001805754255 0.8128443095736972 0.7993784766080843 0.8420029390317137 0.8997551830989786 0.9820321299868636 1.1496571713999977 1.03083193433056 1.2066365554434462 1.110372329565843 0.9347931607912021 1.0 11.80755624953719 -6.715344164233644 1.8306128609108478 1.0705913917175425 0.8153730558957252 0.7125641786179502 0.07012891458630323 0.13213337250086615 0.8968648708733461 0.009995391277131793 0.024491140260791782 1.9259980175565814e-07 6.715344164233644 -0.2552183358218173 TSS(ph)FAEPGGGGGGGGGGPGGSASGPGGTGGGK ddPTM_A549_PD325901_60min_R1 2 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK 32 0 P49840 P49840 GSK3A Glycogen synthase kinase-3 alpha 1 T(0.17)S(0.17)S(0.659)FAEPGGGGGGGGGGPGGSASGPGGTGGGK;T(0.167)S(0.167)S(0.666)FAEPGGGGGGGGGGPGGSASGPGGTGGGK 130.46 3.437e-30 64385000.0 7220.0 7151.299999999999 7659.1 8841.9 8850.2 7447.6 7144.6 8423.3 10037.0 8704.2 10317.0 True False 7952.969084916925 7753.965148489533 8178.892583909805 9388.044081588134 8228.592483532511 7386.949214843911 7416.491662675137 8255.290673548985 9615.179794607704 8154.61532653194 9048.07440485146 0.8789681349937447 0.8569740700111791 0.9039373703121173 1.0375737048044593 0.9094302406620846 0.8164111925166226 0.8196762461080681 0.9123809447369934 1.062676914930338 0.9012542295363465 1.0 13.143395077724222 -8.684607376252496 5.91548551714838 1.0294803789039388 0.8906026471312277 0.22475807205430143 0.06911094970277333 0.1250860255524117 7.369502957170348 0.010786279459819257 0.01219570317359349 2.067248206167629e-09 8.684607376252496 -0.13887773177271112 TSS(ph)FTEQLDEGTPNR ddPTM_A549_PD325901_60min_R1 1 TSSFTEQLDEGTPNR 15 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71;C9J0Y3;C9JHJ5 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 T(0.014)S(0.137)S(0.615)FT(0.234)EQLDEGTPNR 65.774 0.0036084000000000003 196940000.0 7085.8 8244.8 7520.3 7565.1 8320.4 8757.2 7025.4 8666.0 8404.9 8388.8 10022.0 True False 7805.1451997097365 8939.618231128114 8030.672781237592 8032.379045411325 7736.00380782173 8685.884266640409 7292.755441446386 8493.149831654518 8051.671281827069 7859.129736358433 8789.35753469238 0.8880222665766104 1.0170957542508243 0.9136814322935218 0.9138755607229319 0.8801557767205431 0.9882274366876584 0.8297256554487887 0.966299277066759 0.9160705148295996 0.8941643010126444 1.0 13.101541998905851 -10.731254777052435 0.7943510354632827 1.0043690929708489 0.9242068747966883 0.0 0.058475051222909184 0.8080667633122356 0.824343816327559 0.04121233109494777 0.008577787426498104 1.8567149014533663e-11 10.731254777052435 -0.08016221817416058 TSS(ph)GRLR ddPTM_A549_PD325901_60min_R1 3 TSSGRLR 7 1 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 T(0.003)S(0.308)S(0.689)GRLR;T(0.008)S(0.184)S(0.808)GRLR;T(0.003)S(0.021)S(0.976)GRLR 56.434 0.010487999999999999 116483000.0 4883.200000000001 4874.5 4401.6 4958.2 5769.0 6872.7 4868.7 6344.5 4811.4 5955.6 7892.0 True False 5378.938869178161 5285.291222059238 4700.319044970998 5264.4567531107905 5363.805341969566 6816.731009836423 5053.981042754865 6217.953970336036 4609.193590094206 5579.562399610946 6921.334031509909 0.777153485829484 0.7636231972041141 0.6791059387644682 0.760613016095444 0.7749669814446791 0.9848868699014853 0.7302033133708363 0.8983750736531887 0.6659400585364751 0.8061397375433054 1.0 12.756834417199833 -10.998003838408616 1.2489624870278222 1.0011732722979423 0.7727788955388256 0.06804099589811974 0.1030036374402827 0.3340162659429644 0.9194269305186232 0.06541687964644646 0.014601310349633467 1.0046069112596067e-11 10.998003838408616 -0.22839437675911667 TSS(ph)IADEGTYTLDSILR ddPTM_A549_MK2206_60min_R1 2 TSSIADEGTYTLDSILR 17 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 T(0.02)S(0.003)S(0.977)IADEGTYTLDSILR;T(0.266)S(0.003)S(0.732)IADEGTYTLDSILR 415.23 0.0 171525000.0 51390.0 56995.0 47963.0 45138.0 68744.0 56636.0 49309.0 56912.0 81902.0 70062.0 68342.0 True False 60063.375635128556 59895.80205467211 54764.87461422589 56196.81202632179 58631.84866462612 62629.18392806586 58267.80703396573 64979.4502856902 63351.327770618656 54234.945539827764 51370.795256754616 1.1692124938873898 1.1659504540529098 1.0660702124720367 1.093944754902984 1.1413459412411329 1.2191593222382693 1.1342593927685836 1.26491034372582 1.233216800596225 1.055754447030807 1.0 15.648660787361155 -10.92003682794761 1.204799095794006 1.0010181481546523 1.169048795517936 0.4509176503828507 0.05757239766161336 0.3110867877343068 0.810032862379164 0.04250746370146856 0.010310530584598559 1.2021624875373103e-11 10.92003682794761 0.16803064736328377 TSS(ph)IADEGTYTLDSILR ddPTM_A549_PD325901_60min_R1 2 TSSIADEGTYTLDSILR 17 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 T(0.116)S(0.016)S(0.868)IADEGTYTLDSILR;T(0.046)S(0.006)S(0.948)IADEGTYTLDSILR 395.36 1.1335999999999992e-303 162242000.0 61010.0 65663.0 70847.0 69441.0 75654.0 70564.0 72059.0 78240.0 92535.0 107782.0 108270.0 True False 67203.69028681178 71196.65145431846 75655.1034576199 73730.21285804652 70340.32403213125 69989.35017941959 74801.24467719767 76679.44182190722 88646.07574913063 100976.62612580882 94953.4763800782 0.7077538690401388 0.7498056329115712 0.796759701085497 0.7764877671557854 0.7407872435399223 0.737090971785671 0.787767310148651 0.8075474932057888 0.933573778745073 1.0634326406504724 1.0 16.534933199982024 -8.753200505582733 1.2666178731775168 0.9792064248403458 0.7533406592350094 0.8976927280145369 0.035860143304480056 0.07154430479947893 0.2260745844734484 0.0058066948854183596 0.006200178384417602 1.7652226624722295e-09 8.753200505582733 -0.22586576560533644 TSS(ph)IATALNTSGAGGSR ddPTM_A549_MK2206_60min_R1 1 TSSIATALNTSGAGGSR 17 0 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 T(0.016)S(0.019)S(0.963)IAT(0.002)ALNTSGAGGSR 76.155 0.0004482 3529400.0 3494.0 3128.0 2737.7 3535.2 4682.1 3314.5 2864.1 3749.4 5087.5 4754.0 4445.7 True False 4083.7017799015225 3287.201839231766 3125.947026486376 4401.324158701158 3993.3692923403632 3665.238190012964 3384.469896489107 4280.888932055928 3935.1893730680827 3680.068098203608 3341.7099949219205 1.2220395504418804 0.9836885439571401 0.9354333653239154 1.317087408958118 1.1950077350843453 1.0968151621722646 1.0127958146075406 1.281047409428463 1.1775975111688377 1.1012529823940014 1.0 11.706370821459732 -10.863237582295284 1.1612235048801454 1.0014237411066658 1.1349443124678182 0.048857006107444256 0.11892356169555272 0.7374418500571716 1.7953286007861076 0.07688024192725536 0.019510372401507554 1.3701320256558668e-11 10.863237582295284 0.13352057136115247 TSS(ph)IATALNTSGAGGSR ddPTM_A549_PD325901_60min_R1 1 TSSIATALNTSGAGGSR 17 0 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 TS(0.013)S(0.983)IAT(0.004)ALNTSGAGGSR 130.05 4.8601e-12 7916100.0 4125.0 4588.5 3661.1 4619.2 5997.2 3981.8 4816.6 5074.0 4984.2 5508.1 6257.3 True False 4543.766963335501 4975.1889983421515 3909.5642619827618 4904.517493035648 5575.977361216829 3949.3735409615824 4999.898348744651 4972.795089524002 4774.731407022391 5160.3176259817765 5487.691768292821 0.8279923791618188 0.906608681465704 0.7124241715928221 0.8937304972872786 1.0160879285229012 0.719678456392277 0.911111367011067 0.9061724490898294 0.8700801008194696 0.940343926712034 1.0 12.421983735406844 -14.999999991135011 0.1856006500982544 1.6097381090958478 0.8338925093259866 0.1984952071920031 0.08348115305983786 45.34747123630301 0.5126573058112789 10.002361598908111 0.08177852087803579 1.0000000204123911e-15 14.999999991135011 -0.7758455997698612 TSS(ph)IATALNTSGAGGSRPAQAVR ddPTM_A549_PD325901_60min_R1 2 TSSIATALNTSGAGGSRPAQAVR 23 1 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 T(0.127)S(0.127)S(0.743)IAT(0.003)ALNTSGAGGSRPAQAVR;T(0.044)S(0.058)S(0.657)IAT(0.241)ALNTSGAGGSRPAQAVR 173.21 4.862399999999999e-41 39897000.0 11170.3 11043.5 10720.8 11591.599999999999 12744.7 11785.2 10467.6 11964.5 12200.2 12701.3 14199.2 True False 12304.300632859764 11974.17450216662 11448.377957407545 12307.586805566345 11849.556238828136 11689.225238570605 10865.95024609051 11725.858661531327 11687.468021338347 11899.337750382578 12452.788416144896 0.9880759410404324 0.9615657234360652 0.9193425259329754 0.9883398315520804 0.9515584656899272 0.9386833573286815 0.8725716588907052 0.9416251420709025 0.9385422469866813 0.9555560853306737 1.0 13.604181204872205 -10.622891727275892 0.9393166408058012 0.999406071869115 0.9435383936750528 0.08110472663602275 0.03276101856197494 0.5434241811398232 0.8677957966639651 0.019872855202653184 0.005611417313886058 2.382913472702588e-11 10.622891727275892 -0.05586767819406224 TSS(ph)IWVK ddPTM_A549_PD325901_60min_R1 1 TSSIWVK 7 0 A0A2R8Y7Y8 A0A2R8Y7Y8 1 T(0.104)S(0.104)S(0.792)IWVK 49.813 0.053706 6056400.0 1708.4 1837.5 1979.8 1902.4 2377.5 1949.7 2219.5 2376.6 2191.3 1924.7 2330.5 True False 1881.8355103423908 1992.3525737068105 2114.1611335045395 2019.9069273361226 2210.512601929734 1933.8222896209738 2303.964287057003 2329.196848593367 2099.2072814510198 1803.1741135286425 2043.8632742566965 0.9207247539719939 0.9747973843462601 1.0343945997431794 0.9882788896780357 1.0815364363027873 0.946160300436074 1.127259497284572 1.1396050205170596 1.0270781357497851 0.882238130231296 1.0 10.99708297401522 -5.36184423216857 1.555161224432813 1.0293693856241382 0.8903652356573905 0.16385581979698016 0.07121402045079701 0.9566492333116524 2.4735077995393926 0.008144602139163293 0.18981557453688178 4.346660973347377e-06 5.36184423216857 -0.1390041499667477 TSS(ph)KES(ph)SPIPS(ph)PTSDR ddPTM_A549_MK2206_60min_R1 1 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.128)S(0.149)S(0.71)KES(0.594)S(0.418)PIPS(0.911)PT(0.078)S(0.013)DR 88.992 1.1344e-05 5605500.0 1639.9 1868.7 1786.9 1033.7 2518.3 1942.7 1835.3 2053.0 2612.4 2275.5 2244.3 True False 1916.675028294364 1963.808848136956 2040.309289413927 1286.9565464045559 2147.861405971837 2148.275224540108 2168.7502534920054 2344.019037048814 2020.6955711455669 1761.4629695966141 1686.9783704710785 1.136158626479096 1.1640984155526393 1.2094460279559973 0.7628767321096008 1.2732003228779156 1.2734456245222723 1.285582726758017 1.3894778250145916 1.197819489873661 1.0441526699033707 1.0 10.720225760946631 -4.121989220391188 16.239942168249375 1.138260845720231 1.1187562602485344 0.0 0.16499848451195118 0.0 0.0 0.022532936323220974 0.0 7.551109700169662e-05 4.121989220391188 -0.019504585471696645 TSS(ph)KES(ph)SPIPS(ph)PTSDR ddPTM_A549_PD325901_60min_R1 2 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.105)S(0.129)S(0.735)KES(0.512)S(0.519)PIPS(0.805)PT(0.176)S(0.019)DR;T(0.044)S(0.06)S(0.896)KES(0.473)S(0.527)PIPS(0.861)PT(0.13)S(0.01)DR 183.77 4.669899999999999e-34 106256000.0 18081.3 18976.7 20437.0 19623.3 21025.8 22230.1 20513.2 21585.3 19884.6 22318.2 27777.4 True False 19916.90026525045 20575.933107734443 21823.97771766456 20835.386673252167 19549.020343072236 22049.06543596617 21293.841051253745 21154.76425815973 19048.919412559182 20909.025043152167 24360.955895446456 0.8175746613035538 0.8446274931100094 0.8958588411444024 0.8552778783671093 0.802473450835578 0.9050985326929465 0.8740971061498447 0.8683881022137547 0.7819446615442459 0.858300681339868 1.0 14.57228312357216 -10.957795668196953 1.19879474564292 1.0007155117801163 0.8458297355854384 0.06302584948753431 0.05419322241233045 0.22552709192006343 0.5718329442601101 0.02891419288772176 0.006589921679198929 1.1020576962120167e-11 10.957795668196953 -0.15488577619467792 TSS(ph)KES(ph)SPIPS(ph)PTSDRK ddPTM_A549_MK2206_60min_R1 2 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.295)S(0.332)S(0.374)KES(0.5)S(0.5)PIPS(0.402)PT(0.317)S(0.281)DRK;T(0.101)S(0.114)S(0.748)KES(0.519)S(0.519)PIPS(0.877)PT(0.117)S(0.005)DRK 78.837 0.0012182 127487000.0 6134.3 6835.3 5733.2 5374.0 8935.3 6336.599999999999 6154.9 7037.2 9693.7 8994.2 9522.2 True False 7169.619870764142 7183.187574073169 6546.253969482302 6690.630241248025 7620.929206520336 7007.134806105341 7273.165659683947 8034.744650521146 7498.092427658001 6962.403973256815 7157.57494064951 1.001682822773706 1.0035783954252717 0.9145910484715464 0.9347621641025932 1.0647362088015777 0.978981689218539 1.0161494249089829 1.1225512435629543 1.0475744214810263 0.9727322495382795 1.0 12.805255155152159 -6.757626304571889 24.999083025125444 1.029255339434345 0.9630009090769032 0.3174974293424747 0.046055617956987455 91.1987681716195 597903.9009160729 0.006520871944628663 0.013181317072334171 1.7473250191803646e-07 6.757626304571889 -0.06625443035744194 TSS(ph)KES(ph)SPIPS(ph)PTSDRK ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.276)S(0.315)S(0.403)KES(0.503)S(0.503)PIPS(0.811)PT(0.154)S(0.036)DRK 79.426 9.214200000000001e-05 253790000.0 48789.0 51722.0 53965.0 52020.0 61149.0 55008.0 56734.0 59055.0 56988.0 61444.0 63726.0 True False 53742.0233634365 56080.79445837479 57627.389417907085 55233.157254008176 56854.10519259781 54560.0330858443 58893.043416036024 57877.10169724874 54592.99254110834 57564.41535390134 55888.10599239743 0.9616003693298737 1.0034477544471372 1.031120815326006 0.9882810711374197 1.0172845220471738 0.9762369312222927 1.0537670291429693 1.0355888908656499 0.9768266712873528 1.0299940270248547 1.0 15.770253663484207 -5.258192959782948 23.750700210881174 1.0000365685777421 0.9616003485087076 0.11496352368771334 0.02622811308578115 235.44329465793933 1722320.4825943378 0.003584240278853927 0.03520335329608879 5.518322022696968e-06 5.258192959782948 -0.03843622006903458 TSS(ph)KES(ph)SPIPSPT(ph)SDRK ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.113)S(0.125)S(0.746)KES(0.573)S(0.447)PIPS(0.228)PT(0.741)S(0.026)DRK 80.061 0.00013735 328510000.0 5368.1 5573.9 5845.3 4706.6 5389.5 5648.3 5726.7 5911.5 6346.4 6503.4 6946.7 True False 5913.065560213645 6043.632114603748 6241.99720864435 4997.315992535851 5010.96011276564 5602.302117487893 5944.6327022704845 5793.590495017962 6079.682878200494 6092.774214122811 6092.299938759488 0.9705801782007569 0.9920115843532074 1.024571552843694 0.8202675578631151 0.8225071259025979 0.9195709623299722 0.9757616601327295 0.9509693470866194 0.9979290152018413 1.000077848327904 1.0 12.572771255625305 -8.367924548530478 1.486958153747747 0.9992166390533539 0.9258547328080036 0.19808113066727717 0.06017887903836809 0.4750868694979421 2.0375397885485595 0.011969956407705097 0.014919197406946227 4.286229800692459e-09 8.367924548530478 -0.07336190624535033 TSS(ph)KES(ph)SPIPSPTSDRK ddPTM_A549_MK2206_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.089)S(0.103)S(0.807)KES(0.539)S(0.461)PIPSPTSDRK 82.36 0.00015835 30966000.0 4778.3 4818.7 4638.4 4244.6 6229.7 4913.9 4744.1 4025.7 7016.2 7541.4 7441.1 True False 5584.760221781177 5063.95124766819 5296.194867098078 5284.527190547335 5313.319382433687 5433.885636417167 5606.041561374944 4596.355303189187 5427.041902569102 5837.792502270235 5593.269506087569 0.9984786564822005 0.9053651432595402 0.9468871223412062 0.9448011015374447 0.9499487512001358 0.9715043465191632 1.0022834685998008 0.8217653910984681 0.9702807806172132 1.0437173635056443 1.0 12.449476131475576 -8.988707047611499 20.780284803548227 0.9868890697250656 0.9417481709613357 0.22236488015285227 0.04953623344334912 11.825497657054305 21763.290777140515 0.007976984654147912 0.008024827424999176 1.0263440109004637e-09 8.988707047611499 -0.04514089876372995 TSS(ph)KESS(ph)PIPS(ph)PTSDR ddPTM_A549_MK2206_60min_R1 1 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.271)S(0.305)S(0.414)KES(0.453)S(0.556)PIPS(0.695)PT(0.144)S(0.161)DR 49.076 0.005562 17763000.0 3701.8 5262.2 3287.1 4319.8 5374.2 4621.9 4930.6 4730.0 6080.8 6189.4 8185.4 True False 4326.573339679292 5530.02350332653 3753.260207752263 5378.151193923193 4583.662299159689 5110.9863902310835 5826.426197279839 5400.491985017481 4703.508509042243 4791.210241275011 6152.739274452592 0.7031946498438659 0.8987904828485577 0.6100145057887553 0.8741067927669803 0.7449791214446505 0.8306847019266563 0.946964585590735 0.8777378244258467 0.7644576341097621 0.7787117294518032 1.0 12.587013143538748 -14.999999999999893 0.24779643798907708 2.216521026008189 0.7818040559971055 0.0 0.11211775698025624 32.879437381104005 0.4218230329600457 19.686432071194115 0.04607405896096069 1.0000000000002454e-15 14.999999999999893 -1.4347169700110838 TSS(ph)KESS(ph)PIPS(ph)PTSDRK ddPTM_A549_MK2206_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.079)S(0.093)S(0.6)KES(0.383)S(0.845)PIPS(0.865)PT(0.11)S(0.024)DRK 87.319 2.3259e-06 62191000.0 14632.0 16354.0 15335.0 13669.0 20383.0 14570.0 15199.0 15056.0 22541.0 23300.0 22436.0 True False 17101.523881945912 17186.34874641824 17509.73359066683 17017.905613624727 17384.68770119682 16111.787729216738 17960.461560957337 17190.234107066204 17435.49949058039 18036.513817447212 16864.52199790095 1.0140532820363637 1.019083063757001 1.0382585164789246 1.0090950467343736 1.0308437857509756 0.9553658106184153 1.0649849170461396 1.0193134504023176 1.0338567255419697 1.0694945175257347 1.0 14.04170380724253 -11.037997543362772 1.358869041969361 1.0000946370097705 1.0218981563631329 0.0 0.03260117156777803 0.8385674049247953 2.7794406727602827 0.0164878209786511 0.0037651770347358667 9.162256728443796e-12 11.037997543362772 0.021803519353362333 TSS(ph)KESS(ph)PIPS(ph)PTSDRK ddPTM_A549_PD325901_60min_R1 2 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.13)S(0.151)S(0.719)KES(0.336)S(0.667)PIPS(0.949)PT(0.045)S(0.004)DRK;T(0.105)S(0.128)S(0.767)KES(0.091)S(0.909)PIPS(0.675)PT(0.255)S(0.07)DRK 101.33 4.9348999999999996e-09 578190000.0 49743.7 49651.5 52755.4 50749.8 56209.1 54431.1 51089.1 57829.0 57499.0 57840.6 60104.8 True False 54793.64380462351 53835.80615695438 56335.698687991426 53884.49988484168 52261.166726868025 53987.83116817371 53033.32365752823 56675.5552290271 55082.51698815865 54188.53464486144 52712.29063571931 1.0394851588463092 1.0213141092463498 1.0687393396980702 1.0222378734633863 0.9914417699665361 1.0241981617014013 1.0060902878235265 1.0751867267673276 1.0449653453464836 1.028005688831549 1.0 15.685851765925154 -6.415083589442291 20.44278298449917 1.022563037664379 1.0417436572876295 0.11144705781259734 0.023748338172460325 13.611938929644605 2565.3455845103526 0.0037353829965462945 0.00868023918973599 3.845177660945761e-07 6.415083589442291 0.01918061962325046 TSS(ph)KESS(ph)PIPSPT(ph)SDR ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.168)S(0.203)S(0.624)KES(0.335)S(0.669)PIPS(0.333)PT(0.63)S(0.037)DR 90.59200000000001 4.1812e-06 87316000.0 19087.0 20677.0 24689.0 24473.0 25999.0 24310.0 21315.0 26052.0 20982.0 24760.0 35951.0 True False 21024.698188893257 22419.523355937807 26364.544007017674 25984.641627784356 24172.919931680823 24112.02741995482 22126.153989015562 25532.37242260137 20100.199506870464 23196.64937443197 31529.25491216582 0.6668314315534525 0.7110705095440442 0.8361930556387712 0.8241438530714524 0.7666822447603576 0.7647509428029965 0.7017658378117272 0.8097994225911598 0.6375094991259891 0.735718285733462 1.0 14.944403456731353 -10.9500339465755 1.1849891417281255 1.001413015865825 0.7416175986903666 0.0 0.09735030986377548 0.22992394518438733 0.5687257320016608 0.04904955027540983 0.011179623219317035 1.1219307552931142e-11 10.9500339465755 -0.2597954171754584 TSS(ph)KESS(ph)PIPSPTSDR ddPTM_A549_MK2206_60min_R1 2 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.119)S(0.155)S(0.726)KES(0.329)S(0.671)PIPSPTSDR;T(0.109)S(0.142)S(0.747)KES(0.056)S(0.944)PIPS(0.002)PTSDR 100.59 3.7537e-07 92626000.0 8159.5 9078.3 8590.5 8298.8 10861.599999999999 9343.8 9180.2 9690.099999999999 11612.0 11507.2 12193.8 True False 9536.624119377917 9540.346693445557 9808.762074380402 10332.006372547286 9263.873028274518 10332.554714087531 10848.12350956645 11063.701349686658 8981.900540553628 8907.715527902517 9165.742928240532 1.040463843906713 1.0408699838232245 1.0701546127983435 1.1272415616974578 1.0107061806993995 1.1273013868032389 1.1835509237491642 1.2070708764478146 0.9799424455686546 0.9718487194809918 1.0 13.162036107647554 -8.811132339927543 24.999694601787837 0.9905282854287805 1.0993969859702213 0.44942241992462395 0.05752467710972738 77.94145478405297 39210.66244787585 0.010492674718052099 0.011170310245894193 1.5447836352468593e-09 8.811132339927543 0.10886870054144082 TSS(ph)KESS(ph)PIPSPTSDR ddPTM_A549_PD325901_60min_R1 2 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.122)S(0.156)S(0.721)KES(0.035)S(0.945)PIPS(0.019)PT(0.001)SDR;T(0.091)S(0.119)S(0.791)KES(0.311)S(0.685)PIPS(0.004)PTSDR 120.66 2.8239000000000002e-08 127620000.0 23804.0 24315.0 24868.0 25438.0 32858.0 32314.0 26298.0 29280.0 41389.0 26548.0 29226.0 True False 26220.564556421377 26364.110383499923 26555.6920234321 27009.247486110336 30550.167433946266 32050.845497672537 27298.784780817758 28695.98743028435 39649.56426412458 24871.75474928997 25631.387278878443 1.0229865543808643 1.0285869468027304 1.0360614403932529 1.0537567550378875 1.191904562228715 1.2504530148504311 1.0650529557295298 1.1195643496804129 1.5469144854597012 0.9703631909844205 1.0 14.64562394503788 -6.8447323024641245 0.9639850127984828 1.242989620163582 1.0122212602591838 0.0026945517648911954 0.15742609348310002 0.7971151939911642 1.4143325426537245 0.03352113636691718 0.10636342699025067 1.4297749950455387e-07 6.8447323024641245 -0.23076835990439815 TSS(ph)KESS(ph)PIPSPTSDRK ddPTM_A549_MK2206_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.143)S(0.174)S(0.681)KES(0.416)S(0.583)PIPS(0.002)PTSDRK 69.581 0.0012074000000000002 27702000.0 4775.7 5190.1 4995.9 4516.4 6242.8 4200.2 3838.6 4591.1 6571.8 7212.7 7449.5 True False 5581.721405345074 5454.2539212905285 5704.393742785289 5622.918202748901 5324.492389787151 4644.662376132885 4536.023932356791 5241.90248465407 5083.297793008123 5583.346060562295 5599.583554259367 0.9968100933326184 0.9740463497757271 1.018717497026399 1.0041672114119602 0.9508729244225733 0.8294656792110703 0.81006451433454 0.9361236302415339 0.9077992575254054 0.9971002319119391 1.0 12.45110382137779 -6.859364986610327 5.092375163187655 0.9321056125678747 0.9979392327258049 0.29646176997303275 0.05720927505675458 0.29248371267017786 12.320854604385485 0.009788671195017988 0.01888907552535022 1.3824041006419078e-07 6.859364986610327 0.06583362015793015 TSS(ph)KESS(ph)PIPSPTSDRK ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.123)S(0.149)S(0.729)KES(0.364)S(0.635)PIPSPTSDRK 86.13600000000001 2.9059e-05 26492000.0 3390.5 4357.6 4228.2 3810.0 4395.8 3797.3 3743.9 3538.0 5018.6 4458.0 4941.4 True False 3734.7010640458207 4724.8302449985285 4515.151078232094 4045.3350468621916 4087.054172686743 3766.376047790802 3886.3761632406886 3467.4318144926915 4807.685694651611 4176.521119192963 4333.639126115444 0.8617932770496987 1.0902685035599025 1.041884417883995 0.9334729840526246 0.9430997952868926 0.8691023728980588 0.896792753189934 0.8001201100472809 1.1093876427502836 0.9637445568608484 1.0 12.08136330596626 -8.790097496249825 24.99980232550436 1.0516552724247936 0.9361406806325958 0.17775986121236087 0.08463497313135629 207.236637452904 180781.16375715786 0.015307729531575753 0.01629772359668218 1.6214460525417794e-09 8.790097496249825 -0.11551459179219781 TSS(ph)KESSPIPS(ph)PTSDRK ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.124)S(0.138)S(0.713)KES(0.053)S(0.044)PIPS(0.867)PT(0.032)S(0.029)DRK 60.464 0.0030015999999999997 11640000.0 2967.0 3057.1 3606.5 3197.6 3803.2 3732.2 3448.7 3390.8 3659.8 3799.5 4271.4 True False 3268.2076558100403 3314.7325458933833 3851.2587776462883 3395.108489723499 3536.0763523277237 3701.806200606967 3579.94216570105 3323.167833968861 3505.9913332973283 3559.5989215732734 3746.0448786355078 0.872442205497677 0.8848619419372175 1.0280866627121414 0.9063181568076043 0.9439492763406869 0.988190563791469 0.9556591769944409 0.8871137270462496 0.9359181341613775 0.9502285842528008 1.0 11.871152468225173 TSS(ph)KSEAGAR ddPTM_A549_PD325901_60min_R1 3 TSSKSEAGAR 10 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 T(0.052)S(0.191)S(0.756)KS(0.002)EAGAR;T(0.064)S(0.243)S(0.693)KSEAGAR;T(0.013)S(0.079)S(0.907)KSEAGAR 76.357 0.00041236 166843000.0 15449.4 14934.599999999999 12810.5 12147.1 14101.699999999999 10393.84 7454.91 10878.29 11830.8 16134.2 19586.5 True False 17017.811714752832 16193.191154983262 13679.897565794481 12897.398778934312 13111.245240223998 10309.196013106673 7738.610679533282 10661.313972096585 11333.592618715244 15115.483858520198 17177.48466905333 0.9907045206340273 0.9426986236324021 0.7963853747714271 0.7508316279955732 0.7632808582181417 0.6001574859024353 0.45050895568400845 0.6206562938346748 0.6597934934637814 0.8799590946951623 1.0 14.068231174980424 -5.739985323928444 2.8872885365720604 0.7654605890762674 0.9844242252598746 0.26740121799955374 0.143683464352411 0.3905512569983131 6.4055093561806205 0.026396466812313085 0.12391458161493445 1.8197623526246834e-06 5.739985323928444 0.21896363618360726 TSS(ph)LDGAAVAVLSR ddPTM_A549_MK2206_60min_R1 2 TSSLDGAAVAVLSR 14 0 D6R9V6;A6NJ38;A6NHM7;Q7Z5H3-4;Q7Z5H3-3;Q7Z5H3;Q7Z5H3-5;Q7Z5H3-2 D6R9V6 ARHGAP22 Rho GTPase-activating protein 22 1 T(0.002)S(0.051)S(0.946)LDGAAVAVLSR;T(0.001)S(0.03)S(0.969)LDGAAVAVLSR 158.93 4.4486e-19 11637800.0 1908.94 2279.9 2061.02 2212.7 3770.8 2691.0 2189.68 2563.5 4673.1 3956.6 3973.8 True False 2231.122402897884 2395.937171759749 2353.3036273254747 2754.811599331877 3216.120315148555 2975.7598338587677 2587.516512322985 2926.8839753894963 3614.650311407269 3062.801312021959 2986.995788699357 0.7469452790455366 0.8021227150116018 0.7878496636080581 0.9222683238302852 1.0767073483384344 0.9962383760689928 0.8662605157035326 0.9798754944559076 1.2101290283309085 1.025378516973273 1.0 11.544479488287745 -6.258872724702761 0.5254706324353864 1.0862268758435942 0.6670920639019309 0.5650964346185823 0.08712387799007068 1.0172778216041376 0.339661021092963 0.02241057703483986 0.21592565285046653 5.509691409773568e-07 6.258872724702761 -0.41913481194166335 TSS(ph)LDGAAVAVLSR ddPTM_A549_PD325901_60min_R1 1 TSSLDGAAVAVLSR 14 0 D6R9V6;A6NJ38;A6NHM7;Q7Z5H3-4;Q7Z5H3-3;Q7Z5H3;Q7Z5H3-5;Q7Z5H3-2 D6R9V6 ARHGAP22 Rho GTPase-activating protein 22 1 T(0.056)S(0.094)S(0.849)LDGAAVAVLSR 184.22 4.813999999999999e-26 9118900.0 2751.0 1944.8 2890.5 2638.5 3448.2 2901.7 2697.5 3235.1 3454.2 2834.2 3329.8 True False 3030.2794948208366 2108.6951212761933 3086.666711988521 2801.4741525317286 3206.0103276442123 2878.069517255568 2800.15483862864 3170.573392613147 3309.0319863040672 2655.248128312402 2920.2557093413216 1.0376760792308601 0.7220926285773174 1.0569850791199153 0.9593249466375036 1.097852601533769 0.9855539390092422 0.9588731663708412 1.0857177275507446 1.1331309021052942 0.9092519260620867 1.0 11.51187898748194 -5.810121942512552 24.992484535800127 1.0486101071911553 0.8798835740581263 0.19893400792160842 0.09657615887804896 75.92021984765421 38975.48020414567 0.011845387969672905 0.03682893036910744 1.5483817985657396e-06 5.810121942512552 -0.168726533133029 TSS(ph)LTQFPPSQSEER ddPTM_A549_MK2206_60min_R1 7 TSSLTQFPPSQSEER 15 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 TS(0.018)S(0.982)LTQFPPSQSEER;TS(0.018)S(0.982)LTQFPPSQSEER;T(0.002)S(0.112)S(0.885)LT(0.001)QFPPSQSEER;TS(0.003)S(0.991)LT(0.005)QFPPSQSEER;TS(0.004)S(0.995)LT(0.001)QFPPSQSEER;TS(0.012)S(0.987)LT(0.001)QFPPSQSEER;T(0.006)S(0.086)S(0.907)LT(0.001)QFPPSQSEER 195.2 2.2632999999999998e-38 49841800.0 28032.800000000003 32844.0 29349.899999999998 27574.600000000002 42406.7 34247.200000000004 34213.6 35459.1 52490.100000000006 48660.200000000004 52182.5 True False 32764.05130384185 34515.61931193353 33512.15715113875 34330.37823787082 36168.730605815814 37871.215972548496 40429.76825198828 40485.5360139394 40601.17615946559 37667.82702402339 39224.14508626607 0.8353031336128176 0.8799584856731222 0.8543757187679965 0.87523585695412 0.9221037329499355 0.9655077475686962 1.030736760815836 1.032158532069957 1.035106719857654 0.9603224478488989 1.0 15.25945438268303 -7.177299695029224 1.4429233544537519 1.0195115478836239 0.8586597138873254 0.8923710473410327 0.02353569847775255 0.06514536052841793 0.2656169353920953 0.002877097411863547 0.005934258963609344 6.64814227320456e-08 7.177299695029224 -0.16085183399629843 TSS(ph)LTQFPPSQSEER ddPTM_A549_PD325901_60min_R1 6 TSSLTQFPPSQSEER 15 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 TSS(1)LTQFPPSQSEER;TS(0.003)S(0.933)LT(0.064)QFPPSQSEER;T(0.01)S(0.01)S(0.979)LT(0.001)QFPPSQSEER;T(0.032)S(0.005)S(0.962)LTQFPPSQSEER;TS(0.007)S(0.98)LT(0.013)QFPPSQSEER;T(0.003)S(0.21)S(0.778)LT(0.008)QFPPSQSEER 297.45 9.422899999999997e-124 77999000.0 91887.0 95296.0 96185.0 100826.0 112088.0 103837.0 98167.0 104946.0 111441.0 110577.0 117256.0 True False 101215.30059636587 103326.92836134112 102712.6925073919 107053.79302753997 104215.32556260793 102991.38589904766 101902.79890404337 102852.76970145549 106757.52231651658 103595.14934881101 102834.2553470256 0.9842566589781159 1.0047909425964427 0.9988178760158911 1.0410324134333941 1.0134300599632073 1.0015279981509255 0.9909421579430033 1.0001800407302743 1.03815136265879 1.0073992270301146 1.0 16.64996139837675 TSS(ph)PGGKKPPPTPQR ddPTM_A549_PD325901_60min_R1 1 TSSPGGKKPPPTPQR 15 2 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 T(0.058)S(0.246)S(0.696)PGGKKPPPTPQR 90.45299999999999 6.5742e-06 19134000.0 2141.2 2678.7 2634.5 3137.2 2916.6 4489.6 2936.2 3852.8 3286.5 3461.2 3278.4 True False 2358.5730477318702 2904.4434498984688 2813.2930125354646 3330.9777189018546 2711.748077723771 4453.038186122137 3047.9386977502922 3775.9528815368712 3148.3798341116085 3242.6592413079134 2875.177583489874 0.8203225641697748 1.0101788030682515 0.9784762613239025 1.1585293854645087 0.9431584655137255 1.548787181596298 1.0600871108805467 1.313293795562235 1.0950210005081227 1.12781181236534 1.0 11.489435350600159 -5.171562899566318 1.0913499736231649 1.0998454394767792 0.6570944330966207 0.23747207760822575 0.1640429931480437 2.5683703075357465 2.1312985977029784 0.02431588862538149 1.367651123123494 6.736543219690595e-06 5.171562899566318 -0.4427510063801584 TSS(ph)PHKEES(ph)PKK ddPTM_A549_MK2206_60min_R1 1 TSSPHKEESPKK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.302)S(0.333)S(0.368)PHKEES(0.998)PKK 52.887 0.007553699999999999 24385000.0 5011.6 4195.7 3592.6 2190.9 2069.3 2244.5 2086.5 2775.6 2019.3 7061.7 7091.9 True False 5857.435558143811 4409.2432087163415 4102.084701521337 2727.6705983532397 1764.9087111851343 2482.01150022148 2465.5900419065388 3169.049799918501 1561.9317741594855 5466.457065436349 5330.785503517283 1.0987940809621848 0.8271282357557056 0.7695084896615625 0.5116826772627612 0.3310785455578052 0.46559958163460796 0.46251908659234703 0.5944808317324985 0.2930021800968945 1.0254505760604227 1.0 12.380132417746346 -5.535625720195597 1.5870103534426783 0.5956434942515668 1.1373895560730354 0.3142981900499584 0.2269529456368607 0.728801716049611 2.4957528399765114 0.03950279207993163 0.5168861651973788 2.9132266876148738e-06 5.535625720195597 0.5417460618214686 TSS(ph)PHKEES(ph)PKK ddPTM_A549_PD325901_60min_R1 2 TSSPHKEESPKK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.283)S(0.339)S(0.407)PHKEES(0.97)PKK;T(0.25)S(0.325)S(0.424)PHKEES(1)PKK 114.63 1.1278e-05 22188100.0 4589.0 5206.1 3530.7 4127.5 5026.700000000001 3533.1000000000004 2636.8 3234.5 4507.4 4911.8 5559.7 True False 5054.8719017567555 5644.836317809537 3770.314533823859 4382.44630076737 4673.641933173584 3504.327604995574 2737.1448669123256 3169.985360083836 4317.969652905727 4601.66810974697 4875.8921458420755 1.0367070785327575 1.1577032774654747 0.7732563438752436 0.8987988597131928 0.9585203678385379 0.7187049057235392 0.5613628819182209 0.6501344298165097 0.8855753006324971 0.943759207978185 1.0 12.25145049872938 -5.755198014549018 24.993182052035714 0.8735035024480593 1.0972052239273484 0.314922951760786 0.14065056743118962 169.6227234771646 679224.1261685529 0.022658381444039564 0.08356664604654869 1.7571222795596526e-06 5.755198014549018 0.22370172147928913 TSS(ph)PLFNK ddPTM_A549_MK2206_60min_R1 1 TSSPLFNK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 T(0.082)S(0.18)S(0.738)PLFNK 47.853 0.036689 13461000.0 1674.0 1910.6 1502.8 1541.0 2195.4 1881.6 1682.0 1919.5 3105.3 2849.0 2631.8 True False 1956.5302746294058 2007.8413791675862 1715.9196374342441 1918.5450691781198 1872.4595682287954 2080.709663095005 1987.5976278393468 2191.5950032222095 2401.954508145127 2205.4089212835665 1978.2514260151404 0.9890200249067995 1.014957630139082 0.8673920892303765 0.9698186206000674 0.9465225418796006 1.0517923231256048 1.004724476222435 1.1078445208740804 1.2141806024037431 1.1148274138874235 1.0 10.950010081847863 -7.7341951884403795 1.4860501406361644 1.102613459153205 0.9576871719522004 0.5203467427847633 0.06191415604152163 0.3193781483689073 1.4361517762978944 0.014386037258048502 0.022983964162977273 1.84418638546574e-08 7.7341951884403795 -0.14492628720100464 TSS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 TSSPPR 6 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.057)S(0.31)S(0.633)PPR 75.243 0.045908 180600000.0 3621.9 2971.9 2553.5 2228.5 2409.4 1596.3 1448.5 1767.2 2461.3 2821.1 4002.2 True False 3989.5926216981456 3222.3524428839582 2726.7958654428935 2366.1493837092885 2240.1720559787595 1583.300262051578 1503.623460149614 1731.9518096584184 2357.86012040131 2642.9752645480617 3509.9547720361084 1.136650720825044 0.9180609586643439 0.7768749293202692 0.674125319950119 0.6382338809110198 0.45108850822402846 0.42838827215923614 0.4934399222055278 0.6717636760411947 0.7529941085294624 1.0 11.777236725283203 -5.442775408659678 1.9204460534954406 0.7348400094279652 1.1826589323663557 0.3769445956113183 0.1708436178108871 0.6542045022221751 3.290411223868047 0.032628153592118445 0.4537339227204466 3.6076516112738306e-06 5.442775408659678 0.44781892293839043 TSS(ph)PPRK ddPTM_A549_MK2206_60min_R1 1 TSSPPRK 7 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.325)S(0.325)S(0.35)PPRK 60.91 0.011890000000000001 161810000.0 9553.9 6749.6 4517.3 3325.1 6676.1 6758.8 6337.6 7138.0 7632.2 9983.8 10341.0 True False 11166.364749571023 7093.125810127465 5157.92106613103 4139.749649269408 5694.054533776195 7474.011729871662 7489.0598847768415 8149.8333592082 5903.518886118968 7728.452645949759 7773.044302919132 1.436549737067309 0.9125286739281383 0.6635651187777221 0.5325776475652845 0.7325385411270354 0.961529542172406 0.9634654831395157 1.0484738078937188 0.7594860721303143 0.9942632956623408 1.0 12.92426402364917 -7.284639103230938 24.098473231263952 0.9083978076303295 0.8301083238380257 0.01864681062546647 0.22638675446577508 1949.0171259741594 2024516.4293612638 0.035425088051704835 0.05665634368571032 5.1923133861660796e-08 7.284639103230938 -0.07828948379230383 TSS(ph)PRS(ph)PPSSSEIFTPAHEENVR ddPTM_A549_MK2206_60min_R1 2 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 2 T(0.283)S(0.331)S(0.389)PRS(0.997)PPSSSEIFTPAHEENVR;T(0.305)S(0.342)S(0.382)PRS(0.915)PPS(0.02)S(0.019)S(0.017)EIFTPAHEENVR 113.5 1.9434e-11 7453000.0 1138.4 1219.1100000000001 1219.65 1185.26 1273.33 968.95 955.05 1166.18 1781.99 1413.51 1808.47 True False 1330.5340887921848 1281.1574917601777 1392.6147097396026 1475.6487532083436 1086.0248437700516 1071.4836458630448 1128.5702226325611 1331.4895862764668 1378.3721102532875 1094.1971092746696 1359.3769877671568 0.9787822662627621 0.9424593054679714 1.0244507022493006 1.085533127666203 0.7989136593770801 0.7882167018459015 0.8302113635793503 0.9794851599360259 1.013973403005248 0.8049254321069109 1.0 10.40872989011245 -8.508051490740446 22.957002638947376 1.0060791309181087 0.9212489728524587 0.0 0.105706835075649 339.3184046708015 525366.6809499355 0.015554179415359354 0.018453310924628225 3.1041915277394426e-09 8.508051490740446 -0.08483015806565009 TSS(ph)PRSPPSSSEIFTPAHEENVR ddPTM_A549_MK2206_60min_R1 2 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 T(0.083)S(0.083)S(0.442)PRS(0.363)PPS(0.028)S(0.001)S(0.001)EIFTPAHEENVR;T(0.081)S(0.188)S(0.538)PRS(0.188)PPS(0.003)S(0.001)S(0.001)EIFTPAHEENVR 140.04 1.2003e-23 52516000.0 4061.8 4573.4 4283.0 3504.2 5200.9 4089.5 4527.4 3375.1 5574.3 6603.2 6417.4 True False 4747.332538524325 4806.166525429201 4890.393802988332 4362.729157309516 4435.854499590571 4522.248175609599 5349.969976385174 3853.5307608102516 4311.729950327944 5111.532533878431 4823.782468770257 0.9841514556800856 0.9963481057748554 1.013808942391023 0.90442079126792 0.9195801278993865 0.9374900723420205 1.1090819312482514 0.7988608080398463 0.8938483396054026 1.0596523717582835 1.0 12.235949134208857 -6.244571978505964 24.235055279042356 0.9439747176643473 0.9979273643236987 0.05190346712649363 0.07977092270417344 1090.7575542175955 1567193.3796706286 0.010327284799104762 0.02723773952938003 5.694138435727189e-07 6.244571978505964 0.0539526466593514 TSS(ph)PSTASTK ddPTM_A549_MK2206_60min_R1 2 TSSPSTASTK 10 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TS(0.049)S(0.45)PS(0.45)T(0.049)AS(0.001)T(0.001)K;T(0.001)S(0.067)S(0.931)PS(0.001)TASTK 103.34 0.00037467 18913900.0 2233.95 2442.8599999999997 2134.39 1708.53 3509.7 3639.2999999999997 2980.41 3129.7 3762.6 3965.4 3598.8999999999996 True False 2610.986145166287 2567.1911397013127 2437.0785965818977 2127.119926698826 2993.4277792714784 4024.408310428176 3521.911917948077 3573.344559304271 2910.377107637539 3069.6133859100933 2705.1938054129832 0.9651752639466382 0.9489860336677052 0.9008887243883976 0.7863096250045173 1.106548363847999 1.4876598868352788 1.3019074311425947 1.3209199844218753 1.0758479121954192 1.1347110805029648 1.0 11.401516239931311 -6.8241959032307475 9.97814074745834 1.1179783849521259 0.9039965283437915 0.42501582440911556 0.14996652328298016 0.4438818291156003 67.61956089964501 0.026409981080665612 0.04998834492038047 1.4990085044322907e-07 6.8241959032307475 -0.21398185660833435 TSS(ph)RESLNR ddPTM_A549_MK2206_60min_R1 3 TSSRESLNR 9 1 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 T(0.063)S(0.063)S(0.873)RESLNR;T(0.038)S(0.131)S(0.829)RES(0.001)LNR;T(0.001)S(0.001)S(0.998)RESLNR 89.171 0.00030755 327294000.0 4736.74 5951.509999999999 5518.0599999999995 4615.5199999999995 5959.56 4738.91 5084.67 5127.450000000001 6387.400000000001 7639.9 7044.5 True False 5536.185909825621 6254.416438045473 6300.603882446365 5746.3226071985655 5082.916618581398 5240.37831076613 6008.4887219654565 5854.281739657054 4940.664098581835 5914.041283859012 5295.156231690728 1.0455188983268078 1.1811580554722283 1.1898806393545445 1.0852036003787147 0.959918158440896 0.9896550888155555 1.1347141536647283 1.1055918812404517 0.9330535082256288 1.1168775811494187 1.0 12.370457535708843 -7.07832245463876 0.4673784473495734 0.9729054320061167 1.1546908582631177 0.0 0.08511605605586095 1.1217728325427412 0.41471598823023686 0.021272593219889155 0.0861844676406733 8.349828306003859e-08 7.07832245463876 0.181785426257001 TSS(ph)RESLNR ddPTM_A549_PD325901_60min_R1 3 TSSRESLNR 9 1 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 T(0.224)S(0.148)S(0.627)RES(0.001)LNR;T(0.034)S(0.021)S(0.938)RES(0.007)LNR;T(0.012)S(0.128)S(0.86)RES(0.001)LNR 93.166 0.00027445 472320000.0 6715.32 6535.47 6128.74 5941.33 7292.51 6152.26 5999.58 6827.8 6455.25 6318.53 6719.2 True False 7397.054342842698 7086.236993133957 6544.673151507533 6308.312460360558 6780.309255393735 6102.1580343353035 6227.897299996149 6691.614172694522 6183.958291236561 5919.576937472926 5892.780996518165 1.2552739270665845 1.2025284831255332 1.11062555275252 1.0705153414131487 1.1506128022405684 1.035531107967673 1.0568689560457094 1.1355613209872144 1.0494125430574193 1.0045472487388543 1.0 12.524732934508776 -2.0000000000000004 0.2249534023783151 1.0099929733431512 2.282606741998512 0.7429478850322419 0.0395815242849949 16.539152667353306 0.19375814991612525 0.02394325211527583 7.808390905509019 0.00999999999999999 2.0000000000000004 1.2726137686553607 TSS(ph)SERVS(ph)PGGR ddPTM_A549_PD325901_60min_R1 1 TSSSERVSPGGR 12 1 G3V538;G3V3N9;G3V500;F8W717;A0A3B3IU69;O00423;O00423-3;H0YJS9 G3V538 EML1 Echinoderm microtubule-associated protein-like 1 2 T(0.238)S(0.292)S(0.361)S(0.109)ERVS(1)PGGR 57.788000000000004 0.003928 50654000.0 965.25 814.35 788.15 941.5 944.45 795.71 885.84 938.64 1016.7 719.51 1000.6 True False 1063.241469420506 882.9781324615735 841.6385985309646 999.6543166983604 878.1150901756204 789.2300015768096 919.5511259502479 919.9180888511648 973.9716346694887 674.0800158076555 877.5325433260026 1.211626255353031 1.0062055694423948 0.9590967365620497 1.1391649509766268 1.0006638464340134 0.8993740546481492 1.0478826488474005 1.048300824678836 1.1098980226738544 0.7681538661264615 1.0 9.777308818581615 -5.255005223774285 24.154715481331923 1.0371048957642452 1.2116263835521364 0.182643964111593 0.10313530927205806 397.6532024607857 1492777.1348167409 0.009373822261943764 0.1204687286768884 5.558975707914804e-06 5.255005223774285 0.17452148778789112 TSS(ph)SETEEK ddPTM_A549_MK2206_60min_R1 1 TSSSETEEK 9 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 TS(0.017)S(0.96)S(0.022)ET(0.001)EEK 82.417 0.0015148 2271000.0 1771.4 1165.6 886.92 810.19 361.81 209.91 183.58 268.56 380.2 1965.4 2160.8 True False 2070.3690134280346 1224.9240613198676 1012.6985925160894 1008.6865863708115 308.58822828680877 232.12253687301907 216.93410970199008 306.62920243050627 294.0853070546411 1521.4147749704189 1624.213724953841 1.2746900125393739 0.7541643334867639 0.6235008219407022 0.6210306998849413 0.18999237818629974 0.14291378856536618 0.13356253944237245 0.18878624020937915 0.1810631830875575 0.9367084833701036 1.0 10.66552576918235 -5.103280062902128 1.2302802185993773 0.4799664306567729 1.8566217807205136 0.4030955921254381 0.3005535486142121 2.0936982299126172 2.054704557040748 0.05547768646424219 3.9940854496883027 7.88351570439479e-06 5.103280062902128 1.3766553500637406 TSS(ph)SETEEKKPEKPLILQSLGPK ddPTM_A549_MK2206_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 T(0.145)S(0.145)S(0.681)S(0.029)ETEEKKPEKPLILQSLGPK 154.26 2.8013000000000004e-33 24944000.0 4705.3 5317.6 5857.4 5444.3 8848.4 7791.5 8080.2 7228.5 11158.0 10899.0 10484.0 True False 5499.439606459822 5588.243126693997 6688.067397063704 6778.153744403918 7546.8120814046015 8615.991358420886 9548.267748197082 8253.16201135282 8630.730815664607 8436.908330315759 7880.5334563199085 0.6978511844333922 0.7091199038324523 0.848682063737717 0.860113567434712 0.9576524385354047 1.09332590314824 1.2116270809737772 1.0472846866393388 1.0951962660272785 1.070601168953817 1.0 12.944077577889162 -6.468589754589699 1.170039238476718 1.0621219263341999 0.7072785720388304 0.856585148228987 0.059852775034150825 0.16477972747471747 0.4181068528901009 0.010681131533222497 0.04138953282148574 3.399462426763706e-07 6.468589754589699 -0.3548433542953695 TSS(ph)SETEEKKPEKPLILQSLGPK ddPTM_A549_PD325901_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 T(0.072)S(0.112)S(0.659)S(0.139)ET(0.018)EEKKPEKPLILQSLGPK 190.23 1.5086999999999997e-50 73924000.0 6665.5 8456.4 7295.9 8799.5 9404.3 9581.7 9064.5 9855.9 9054.9 10497.0 10070.0 True False 7342.1766531182475 9169.050505738385 7791.043647810779 9343.025129885524 8743.774411073733 9503.669812002512 9409.454507784723 9659.316342696025 8674.354042262958 9834.217628570776 8831.453838989459 0.831366702128217 1.038226624166736 0.8821926479890054 1.0579260561423713 0.9900719146004439 1.0761161169235043 1.0654479635327407 1.0937402288229925 0.9822113324045323 1.1135445882255846 1.0 13.108435239370422 -4.45203175577713 1.2861259883839888 1.0095732842083627 7.3769453622437475e-31 0.3840394207151183 0.06598179725707141 7.271290605089585 2.163141049163238 0.00828687649744438 16.016730600056857 3.5315734584885274e-05 4.45203175577713 -1.0095732842083627 TSS(ph)SYTR ddPTM_A549_PD325901_60min_R1 1 TSSSYTR 7 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.016)S(0.016)S(0.577)S(0.39)YTR 69.598 0.021897 87655000.0 4094.3 4292.0 3695.5 3820.5 4444.5 4367.3 4106.7 4476.8 4815.6 5401.3 5885.2 True False 4509.950321935647 4653.70190277531 3946.298852846767 4056.483608014959 4132.33365269262 4331.734156773701 4262.982715772465 4387.506712018339 4613.217078700097 5060.260996208378 5161.357709356579 0.8737914664895144 0.9016429716427166 0.7645854201681979 0.7859334377583074 0.8006291920440758 0.8392625353055989 0.825942117525486 0.8500683268018041 0.8937991393886912 0.9804127675621219 1.0 12.333534905137057 -9.574157347915703 0.5943448141202485 0.9941609331865794 0.8221778894140352 0.7299084949080237 0.03730674978676356 0.2728738763812557 0.21131753628951455 0.01962811655090171 0.01042562863046632 2.6658926180656036e-10 9.574157347915703 -0.17198304377254414 TSS(ph)SYTRR ddPTM_A549_PD325901_60min_R1 2 TSSSYTRR 8 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.073)S(0.048)S(0.448)S(0.384)Y(0.032)T(0.016)RR;T(0.053)S(0.053)S(0.533)S(0.315)Y(0.039)T(0.008)RR 43.272 0.029675 12278100.0 2207.5 2050.73 2711.5 2518.7 3043.8 3488.5 3181.8 3407.0 2948.8999999999996 3617.0 3776.3 True False 2431.6037749243924 2223.5522141375623 2895.5186955740774 2674.274378617269 2830.01398853995 3460.090812608488 3302.8851401477677 3339.0447122602054 2824.9679880759863 3388.622002718919 3311.839039938024 0.7342155659140657 0.6713950126571285 0.8742933037072546 0.8074892367556951 0.8545143512146379 1.044764184153478 0.9972963964485352 1.008214672269426 0.8529907263031875 1.0231843884485194 1.0 11.693416842183467 -6.2490713109464515 1.0183630082648976 0.9460164263629742 0.6977307416707071 0.6569824628927992 0.07073669235828152 0.3765005712473573 0.6445161026696635 0.012224265151619678 0.06911156002350433 5.635451143899741e-07 6.2490713109464515 -0.24828568469226708 TSS(ph)TDEVLSLEEK ddPTM_A549_MK2206_60min_R1 1 TSSTDEVLSLEEK 13 0 K7ENH8;A0A0A0MRB7;P15923-2;K7EMM4 K7ENH8 TCF3 Transcription factor E2-alpha 1 T(0.014)S(0.014)S(0.962)T(0.009)DEVLSLEEK 182.89 4.1402e-25 9191900.0 1955.2 1619.2 2039.2 1752.8 2590.1 1890.3 2073.2 2123.1 2889.1 2837.7 2773.0 True False 2285.189959949471 1701.61036383762 2328.3892232205944 2182.2360786861823 2209.0997210847227 2090.330291320413 2449.873604064528 2424.05592672106 2234.7234629446684 2196.6615991317567 2084.3875690933905 1.0963363981984502 0.8163598694736698 1.1170615569509144 1.0469435296216774 1.059831556204097 1.0028510639360642 1.1753445666201638 1.162958349332034 1.0721247315424487 1.0538642773076985 1.0 11.025407840600224 -5.799099969876947 24.999996691065952 1.0573524270705976 0.9563465393470304 0.21457641474665845 0.08226236366929601 175.06761196221842 116213.7982542367 0.011174319259767014 0.03474342005159877 1.588181124457485e-06 5.799099969876947 -0.10100588772356722 TSS(ph)TDEVLSLEEKDLR ddPTM_A549_PD325901_60min_R1 2 TSSTDEVLSLEEKDLR 16 1 K7ENH8;A0A0A0MRB7;P15923-2;K7EMM4 K7ENH8 TCF3 Transcription factor E2-alpha 1 T(0.003)S(0.012)S(0.937)T(0.049)DEVLSLEEKDLR;T(0.07)S(0.134)S(0.764)T(0.032)DEVLSLEEKDLR 135.81 6.017199999999999e-11 10011200.0 2438.4 2735.2 2929.2 2770.3 3072.6 4150.5 3235.7 4007.7999999999997 3525.7 4333.0 4709.5 True False 2685.9445729447953 2965.704903185233 3127.9931267105253 2941.415139192213 2856.7911758945547 4116.69970409389 3358.836334142981 3927.861284941722 3377.5270899520174 4059.4136405255954 4130.26135598022 0.6503086224932972 0.7180429148608667 0.7573353977179901 0.7121619882318893 0.6916732210561437 0.9967165148358725 0.8132260999124691 0.9509958199750622 0.8177514202731223 0.9828466749804963 1.0 12.012017360506942 -2.863837191888105 0.09342894546864475 1.1066399045677708 2.0597869448547156e-13 0.6557233708152874 0.07466310095732019 51.78076432966477 0.4009539383655033 0.6922445930746763 7.351714681142168 0.0013682416552558286 2.863837191888105 -1.1066399045675648 TSS(ph)TLDSEGTFNSYR ddPTM_A549_MK2206_60min_R1 1 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 TSS(0.995)T(0.004)LDSEGTFNSYR 198.85 1.6065999999999998e-38 6490300.0 1797.8 2158.4 1614.7 1615.0 2728.0 2391.1 1767.8 1929.3 3120.2 2422.5 2733.7 True False 2101.2246880100047 2268.253340728209 1843.6887400619328 2010.6750725001057 2326.714813759749 2644.124614916278 2088.9863772261574 2202.7841832334516 2413.479681935537 1875.2555675006815 2054.8468437182123 1.0225699761680886 1.103855183982394 0.8972390062540173 0.9785036187231461 1.132305709728515 1.2867745462390652 1.0166141499121024 1.071994338637691 1.1745302037052963 0.912601137760436 1.0 11.004815152514318 -6.756597172994925 24.99513141160686 1.0969229419280484 1.000542671663496 0.12870887608214532 0.10272382954582729 167.8085050396689 866205.4681789072 0.014090928584796932 0.02860366781443292 1.7514705004329301e-07 6.756597172994925 -0.09638027026455243 TSS(ph)TLDSEGTFNSYR ddPTM_A549_PD325901_60min_R1 2 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 TS(0.09)S(0.891)T(0.019)LDSEGTFNSYR;T(0.003)S(0.005)S(0.987)T(0.005)LDSEGTFNSYR 250.52 1.4770999999999997e-76 16423000.0 7823.200000000001 8482.7 8978.1 9258.599999999999 10051.7 9652.8 8572.5 9518.0 10944.099999999999 10063.0 11815.6 True False 8617.405504864555 9197.566899038242 9587.407855701133 9830.482694193774 9345.703268482494 9574.190797175643 8898.731178551998 9328.156023273445 10484.157536132923 9427.620462637678 10362.356105259567 0.831606771407003 0.8875941731407861 0.9252150532478711 0.9486725407172764 0.9018897993419608 0.9239395654735433 0.8587555849422426 0.900196434914913 1.011754221688206 0.909795066572992 1.0 13.33906444771971 -8.759117935176148 24.964625011779653 1.0055506091493231 0.8993225400043049 0.33549791237668947 0.041915796614762774 22.91850003840208 246463.3981393012 0.005273862177906501 0.005842844601855113 1.7413339398868671e-09 8.759117935176148 -0.10622806914501826 TSS(ph)TNEDEDLNPEQK ddPTM_A549_MK2206_60min_R1 2 TSSTNEDEDLNPEQK 15 0 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 Q99081 TCF12 Transcription factor 12 1 TSS(0.95)T(0.05)NEDEDLNPEQK;TSS(0.942)T(0.058)NEDEDLNPEQK 426.07 0.0 102686000.0 21429.0 21062.9 20905.0 18071.8 28016.0 23223.0 25254.0 24075.0 31151.0 31353.0 28076.0 True False 25045.691311250626 22134.91164308015 23869.643346129145 22499.39181127393 23894.883512570785 25680.442445820212 29842.32490692917 27487.70497659531 24095.34823792508 24270.335524395803 21103.9543418197 1.1867771748169471 1.0488513803888166 1.1310507480974286 1.0661220853140791 1.132246740376071 1.2168545301925584 1.4140631856748038 1.3024907337922702 1.1417456580721284 1.1500373404571667 1.0 14.365225727999576 -9.992786978499623 1.0808687509371195 1.0197507877524825 1.1804368478024385 0.08863522932131473 0.10674364093888654 0.4504184969130962 1.0619351469561307 0.03795008906603123 0.02106298418656881 1.0167472852577554e-10 9.992786978499623 0.160686060049956 TSS(ph)TNEDEDLNPEQK ddPTM_A549_PD325901_60min_R1 2 TSSTNEDEDLNPEQK 15 0 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 Q99081 TCF12 Transcription factor 12 1 TSS(0.936)T(0.063)NEDEDLNPEQK;TSS(0.952)T(0.048)NEDEDLNPEQK 425.08 0.0 126701000.0 34864.0 35975.0 36526.0 33731.0 42925.0 32774.0 34562.0 37907.0 37981.0 42834.0 45544.0 True False 38403.36761447973 39006.7395042735 39004.87400868107 35814.48726134081 39910.09608321086 32507.09941018505 35877.2758230521 37150.91514753378 36384.79065248533 40129.453929903815 39942.37672720317 0.9614692655062942 0.9765753242647566 0.9765286195930448 0.8966538848187514 0.9991918196502733 0.8138499026284971 0.8982258634253356 0.9301127822529339 0.9109320384459019 1.0046836772878673 1.0 15.285632560867422 -4.019484210746761 19.067186145063992 0.9447902540452866 0.9385186455720922 0.0 0.05631341482618952 0.0 0.0 0.007493241776782359 0.0 9.56127455452492e-05 4.019484210746761 -0.006271608473194412 TSS(ph)TNEDEDLNPEQKIER ddPTM_A549_MK2206_60min_R1 2 TSSTNEDEDLNPEQKIER 18 1 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 Q99081 TCF12 Transcription factor 12 1 T(0.184)S(0.184)S(0.594)T(0.039)NEDEDLNPEQKIER;T(0.001)S(0.059)S(0.906)T(0.034)NEDEDLNPEQKIER 143.29 3.0141e-17 43519000.0 3959.0 5443.1 5094.299999999999 4560.1 6687.5 4772.299999999999 4158.5 3458.8 7179.4 7436.5 8226.9 True False 4627.182411743025 5720.130540640158 5816.748342415005 5677.324704710665 5703.77760887768 5277.301618403639 4914.045621504121 3949.095492130751 5553.277363145945 5756.5894851264475 6183.933679110862 0.7482587381836752 0.9249986881267152 0.9406226916798611 0.9180765835003202 0.9223542658849764 0.8533891034812036 0.7946472062117381 0.6386057317320001 0.8980169664342853 0.9308944409562525 1.0 12.594309131523337 -9.738963588372794 1.3649541573674706 0.9783886563801214 0.8526168496790724 0.19754802454388798 0.08907991583073324 0.3876977773245622 1.459490065974513 0.024954853180731564 0.01751150664424825 1.8240486257326652e-10 9.738963588372794 -0.12577180670104904 TSS(ph)TNEDEDLNPEQKIER ddPTM_A549_PD325901_60min_R1 1 TSSTNEDEDLNPEQKIER 18 1 Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 Q99081 TCF12 Transcription factor 12 1 TS(0.007)S(0.773)T(0.22)NEDEDLNPEQKIER 130.16 4.6977e-13 30257000.0 6064.4 5970.6 6239.4 6671.2 6699.8 8453.6 7126.3 7812.0 7868.9 8001.8 9137.3 True False 6680.0534236246785 6473.763415822521 6662.843204560168 7083.2648726055195 6229.229161055239 8384.756684382144 7397.495246160993 7656.183531604551 7538.197497836861 7496.564982404272 8013.470026117018 0.8336030960187598 0.807860189745968 0.8314554347673393 0.8839198062163045 0.7773447883068523 1.0463328192474735 0.9231325782777651 0.9554142595719431 0.9406907960307859 0.9354954792333309 1.0 12.968211384401416 -7.255498198821915 24.999921434195382 0.9705337531022858 0.82921029734337 0.7543763238682284 0.03973874633095568 178.74602982910858 752145.7832609452 0.005741632145063749 0.009782505993977836 5.5526692000982696e-08 7.255498198821915 -0.1413234557589158 TSS(ph)VVTLEVAK ddPTM_A549_PD325901_60min_R1 1 TSSVVTLEVAK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 T(0.006)S(0.003)S(0.991)VVTLEVAK 238.98 5.9576999999999995e-50 10745000.0 6350.5 7106.2 8282.3 6608.6 8552.5 7144.0 7002.2 7097.5 7880.8 7154.6 7937.1 True False 6995.1980850089885 7705.064413211072 8844.38668351583 7016.798212780441 7951.801904523259 7085.821632585651 7268.672552750862 6955.9347946189655 7549.59738222023 6702.857334988326 6960.887017422368 1.0049291228978063 1.1069084146784893 1.2705832836216504 1.0080321940606323 1.1423546862089178 1.017948088347158 1.0442164245099999 0.9992885644040755 1.0845740439866904 0.9629314939621602 1.0 12.765055443336369 -7.268028058405027 24.628070491286675 1.0364624370636928 1.1102192780280649 0.2454858853082521 0.07331396863311565 526.210540685839 1966941.788610488 0.010377069965883409 0.016828617862219727 5.394757675510401e-08 7.268028058405027 0.07375684096437207 TSSAELSTSAPDEPLLQKS(ph)PSESFIGR ddPTM_A549_PD325901_60min_R1 1 TSSAELSTSAPDEPLLQKSPSESFIGR 27 1 Q15139 Q15139 PRKD1 Serine/threonine-protein kinase D1 1 TSSAELSTSAPDEPLLQKS(0.964)PS(0.034)ES(0.002)FIGR 107.52 4.0632e-13 11348000.0 1822.5 1982.6 2196.3 2035.8 3125.1 2312.0 2346.0 2614.4 2308.8 2763.6 2390.5 True False 2007.518858346412 2149.6806599353063 2345.3541254248007 2161.546742362741 2905.603757009721 2293.171838541156 2435.2783137804595 2562.2537410428768 2211.7691650682755 2589.1058243610732 2096.4836546280344 0.95756475559195 1.025374395450133 1.1187085194999633 1.0310343882677446 1.3859415267061759 1.0938181337493036 1.1616013835378722 1.2221672872987321 1.0549899400292226 1.2349754402547162 1.0 11.03375586682397 -8.963423085624646 9.077252634104239 1.0241192336050824 1.1276287124235609 0.0 0.12497132827913024 0.3864515606296921 88.07571834488434 0.018919784696489677 0.019854273043663037 1.0878697843708213e-09 8.963423085624646 0.1035094788184785 TSSAFVGKT(ph)PEASPEPK ddPTM_A549_MK2206_60min_R1 2 TSSAFVGKTPEASPEPK 17 1 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 TSSAFVGKT(0.975)PEAS(0.025)PEPK;T(0.053)S(0.053)S(0.05)AFVGKT(0.699)PEAS(0.145)PEPK 109.56 2.6837e-09 89634000.0 13575.3 15985.5 16561.0 14451.5 22041.4 16779.0 14783.8 15355.8 21326.0 18973.0 19980.1 True False 15866.47875578052 16799.09367040901 18909.598825890673 17992.118148752477 18799.139258066014 18554.542643001212 17469.82509539319 17532.531675165195 16495.695050624072 14686.986122679222 15018.489747292771 1.056463001457294 1.1185607842784064 1.2590879072444225 1.1979978314394581 1.2517330020786372 1.2354466364599574 1.163221162004142 1.167396453982705 1.0983591112147333 0.9779269666796353 1.0 13.874452122918356 -9.268856147470741 0.8066282369225389 1.018136077989454 1.19023130403302 0.6049404473969372 0.05855012472800405 0.27601034443078665 0.3858813350751572 0.01827172247658461 0.013989861634954985 5.384481045954275e-10 9.268856147470741 0.17209522604356597 TSSAFVGKT(ph)PEASPEPK ddPTM_A549_PD325901_60min_R1 2 TSSAFVGKTPEASPEPK 17 1 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 T(0.023)S(0.023)S(0.021)AFVGKT(0.838)PEAS(0.095)PEPK;TSSAFVGKT(0.997)PEAS(0.003)PEPK 149.85 4.728e-17 136238000.0 10419.5 10828.1 11450.6 10633.8 13456.6 11567.8 11453.0 13328.8 12415.4 11864.900000000001 12943.5 True False 11477.279969569508 11740.621988220253 12227.706574051457 11290.625674887964 12511.454838749816 11473.595672091868 11888.850182322072 13062.946627758674 11893.6239137165 11115.748189123498 11351.531555606758 1.0110776606087697 1.0342764701580127 1.0771856215306856 0.9946345671136587 1.1021820956459525 1.0107530966977596 1.0473344609124502 1.1507651248440227 1.0477549972401734 0.979228937934212 1.0 13.470599339498582 -10.257975708272468 1.101115296343322 1.0047553918806058 1.0529451369156992 0.22343583199890105 0.043405271206308584 0.5809384731944433 1.3965700568199435 0.01632296713496573 0.007540956642687972 5.521083199167284e-11 10.257975708272468 0.048189745035093434 TSSAVS(ph)TPSK ddPTM_A549_PD325901_60min_R1 1 TSSAVSTPSK 10 0 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 T(0.001)S(0.001)S(0.02)AVS(0.474)T(0.474)PS(0.031)K 87.87799999999999 0.00071549 24702000.0 11199.0 12452.0 13763.0 13749.0 16311.0 13100.0 13700.0 15027.0 15349.0 15299.0 14378.0 True False 12335.914235731945 13501.373740297793 14697.039943642272 14598.244503755439 15165.371629895228 12993.317943291162 14221.36099692765 14727.274696546543 14703.93490758531 14333.018529056328 12609.597149651474 0.978295665541774 1.0707220524226635 1.1655439717238305 1.1577090315021628 1.2026848637519236 1.0304308527136645 1.1278204075949185 1.167941728967416 1.1660907745963733 1.1366753718577352 1.0 13.622234564852073 -10.887836318346922 1.1415517478309478 1.0001007441512968 1.1246128049050976 0.0 0.0755277368551272 0.46683520877437557 1.0817426753754873 0.045680709407203667 0.011001829232393305 1.2946837040596549e-11 10.887836318346922 0.12451206075380084 TSSAVST(ph)PSK ddPTM_A549_MK2206_60min_R1 2 TSSAVSTPSK 10 0 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 T(0.001)S(0.001)S(0.001)AVS(0.024)T(0.969)PS(0.005)K;TSSAVS(0.062)T(0.928)PS(0.01)K 131.82 1.1294e-06 30649000.0 4331.2 4592.2 4201.8 4224.9 5776.6 4689.700000000001 4229.0 4661.6 6032.299999999999 5272.4 6660.6 True False 5062.200672326696 4825.923365127911 4797.678421993081 5260.0006896629675 4926.869792215747 5185.960941229084 4997.354558937337 5322.396075551268 4665.993681603655 4081.3611781591676 5006.589196791718 1.0111076569994228 0.9639143887060717 0.9582728347409631 1.050615595350551 0.9840771029052962 1.0358271344795593 0.9981555031796301 1.063078248753048 0.9319705488506387 0.815197935707318 1.0 12.289612368191309 -8.782785756413688 24.9999863902131 0.9678749901900465 1.0062002898033484 0.22300933175976523 0.0575091975739371 306.05062240938213 358432.300363768 0.0066340276737893965 0.007066134919811385 1.6489756538331284e-09 8.782785756413688 0.03832529961330189 TSSAVST(ph)PSK ddPTM_A549_PD325901_60min_R1 1 TSSAVSTPSK 10 0 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 T(0.008)S(0.019)S(0.061)AVS(0.134)T(0.752)PS(0.026)K 74.094 0.0017375 22751000.0 11283.0 12447.0 12769.0 13434.0 15495.0 13052.0 13490.0 14070.0 15115.0 15524.0 13798.0 True False 12428.4418538944 13495.952372750302 13635.581126234709 14263.787669172356 14406.684654848048 12945.708839376812 14003.369332011249 13789.36281229853 14479.769113828383 14543.811990657594 12100.933472728559 1.0270647204121843 1.1152819245858716 1.1268206008209805 1.1787344919561904 1.1905432491894843 1.0698107603477114 1.157213975563963 1.1395288506771089 1.1965828211898628 1.201875212638303 1.0 13.562830721638719 -10.94439902396142 1.1967398286900173 0.9997729635789376 1.140337360180898 0.0 0.07636208177799211 0.30930595525365023 0.7852595488730132 0.03572107024564599 0.008296181927758044 1.136582529116365e-11 10.94439902396142 0.1405643966019603 TSSAVST(ph)PSKVK ddPTM_A549_MK2206_60min_R1 2 TSSAVSTPSKVK 12 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 TSSAVS(0.017)T(0.978)PS(0.005)KVK;TSSAVS(0.01)T(0.988)PS(0.001)KVK 86.291 0.00012832 44250000.0 3338.9 4126.700000000001 4808.1 4096.7 6121.4 4551.6 4481.7 3545.1000000000004 6935.799999999999 7018.700000000001 6876.9 True False 3902.424691732455 4336.7314034391675 5489.960878857855 5100.391683907849 5220.950168969545 5033.247290892445 5295.966877935556 4047.6287814134175 5364.852374196681 5433.170795301148 5169.175937215414 0.7549413560558077 0.8389599147161788 1.0620572689996783 0.9866933812772064 1.0100159546478935 0.9737040007974284 1.0245282695462758 0.7830317308940034 1.0378544741672453 1.0510709755853167 1.0 12.335718591111046 -5.607834884998946 4.6183053633568365 0.9994377844802754 0.7726448704767296 0.5302300489003174 0.07213090195007175 0.10058345867801183 3.7397515875177585 0.009496047448422015 0.040944882505383834 2.4669770822845746e-06 5.607834884998946 -0.22679291400354584 TSSAVST(ph)PSKVK ddPTM_A549_PD325901_60min_R1 2 TSSAVSTPSKVK 12 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 T(0.011)S(0.001)S(0.001)AVS(0.131)T(0.854)PS(0.002)KVK;TSSAVS(0.14)T(0.858)PS(0.002)KVK 84.46799999999999 0.00018932 70581000.0 5014.8 4898.9 5900.200000000001 5885.9 6448.2 6868.1 6767.0 6682.7 6370.9 6315.6 7169.1 True False 5523.898804299362 5311.747495691042 6300.623052784872 6249.458675151223 5995.300677082366 6812.168470711302 7024.521888044487 6549.408306023266 6103.153228401537 5916.831938172964 6287.346148669246 0.8785739919009435 0.8448314074158785 1.0021116865210986 0.9939740118291337 0.9535502794531691 1.0834727895732508 1.1172475193736977 1.0416808858868836 0.9707041864862658 0.94106985654437 1.0 12.618235477271293 -5.7660586356667505 24.90938864276627 1.0039785470639926 0.8617026767129016 0.556498141447427 0.05122769738347959 57.73370575120008 311338.5180385599 0.007343625412981589 0.023979340244104506 1.7137259155621034e-06 5.7660586356667505 -0.14227587035109102 TSSAVWNS(ph)PPLQGAR ddPTM_A549_PD325901_60min_R1 2 TSSAVWNSPPLQGAR 15 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 T(0.001)SS(0.002)AVWNS(0.997)PPLQGAR;TSSAVWNS(1)PPLQGAR 124.16 2.6105e-07 10199200.0 7007.5 7824.900000000001 6547.4 7861.4 7558.799999999999 7124.700000000001 6601.2 6535.200000000001 8384.099999999999 8730.9 9501.1 True False 7718.896241351154 8484.331784488935 6991.745936714631 8346.980823465206 7027.895964444361 7066.67880538676 6852.412278315242 6404.850309234783 8031.745433493118 8179.629483975284 8332.524932435226 0.9263574131419087 1.0182185895973481 0.839090911027284 1.00173487522056 0.8434293352171729 0.8480837276440629 0.8223692498826507 0.7686566030307611 0.9639029584212473 0.9816507661603531 1.0 13.024538013810913 -8.975672126070336 24.42224446573995 0.9840749413015585 0.8846658672648027 0.27733747503432205 0.07134675278442178 125.08558068393666 125572.39389935536 0.012880523366406377 0.013333463235329236 1.0576156628963692e-09 8.975672126070336 -0.0994090740367558 TSSDDES(ph)EEDEDDLLQR ddPTM_A549_PD325901_60min_R1 1 TSSDDESEEDEDDLLQR 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 TSSDDES(0.999)EEDEDDLLQR 70.529 0.0012341 1309100.0 313.66 252.92 328.83 450.88 304.84 328.38 297.18 369.91 274.64 282.85 322.73 True False 345.5025322957121 274.23445602281697 351.14638121542487 478.7298335772244 283.42909004090865 325.7057821540422 308.4893475231357 362.53185486121873 263.0978358863268 264.9908027285169 283.03625595402843 1.2207006170680468 0.968902217486084 1.2406409914935388 1.6914081624051056 1.0013879285025027 1.1507563971131114 1.089928731862682 1.2808671936365008 0.9295552437248883 0.9362433156675075 1.0 8.144843058855948 -8.767561767027056 24.99771531954341 0.9667344068841037 1.2025600418732632 0.2741257516141258 0.18109214473589727 145.73763750219786 595045.4039930699 0.03116543590759271 0.033587135657438115 1.7078048122353896e-09 8.767561767027056 0.23582563498915943 TSSEAS(ph)MDAAYLDK ddPTM_A549_PD325901_60min_R1 1 TSSEASMDAAYLDK 14 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 T(0.065)S(0.065)S(0.313)EAS(0.557)MDAAYLDK 79.693 0.00020091 7139100.0 3511.8 4183.6 4181.8 4379.0 4795.5 4172.4 3563.6 4038.5 4490.2 4167.8 4599.8 True False 3868.3153507494817 4536.1666543454785 4465.602095206223 4649.4808845694315 4458.680623576885 4138.421357754813 3699.214748076743 3957.948949358037 4301.492509091114 3904.6443967188034 4034.053760534627 0.9589151707876148 1.124468567752629 1.1069763469424867 1.152557987713392 1.1052605860626863 1.0258716426244041 0.9169968889027625 0.9811344082914493 1.0662952861890078 0.9679207637037853 1.0 11.978014595073024 -7.291497202927813 7.124740483554166 1.0179010082953428 1.0960479345902387 0.3514721636341702 0.06011835570897088 0.2222875981421329 41.937711129721265 0.009191607821419832 0.01488796974714216 5.110963707412911e-08 7.291497202927813 0.07814692629489595 TSSEDNLYLAVLR ddPTM_A549_MK2206_60min_R1 1 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 0 56.358999999999995 0.043861000000000004 846110.0 647.03 431.79 765.84 867.56 1160.6 696.69 723.62 827.96 802.35 1054.1 1169.2 False True 756.2328456352838 453.7662666757938 874.447627849775 1080.1122389462482 989.8772774375235 770.413273374606 855.0923873110038 945.3258655211567 620.6190060896663 815.9780778957551 878.8553717215982 0.8604747379012908 0.5163150630653901 0.9949846766445897 1.2289988474786313 1.1263255699267598 0.8766098474945155 0.9729614391910185 1.0756330289810356 0.7061673923366137 0.9284554707759569 1.0 9.779481958479435 -5.77801714617476 24.99988939433759 0.9303013761928338 0.6883948190292939 0.30038859886835967 0.15724155015095148 246.0990745633037 371127.99008555163 0.025598468094902058 0.07990696343751906 1.6671813900528287e-06 5.77801714617476 -0.24190655716353993 TSSEDNLYLAVLR ddPTM_A549_PD325901_60min_R1 2 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 0 ; 164.9 1.4426e-18 12551400.0 3252.8 2950.3 3455.3 3242.5 3967.6 3653.2 4074.3 3486.6000000000004 3346.4 4347.0 4152.0 False True 3583.021861415202 3198.932135078752 3689.7974364068264 3442.781860748201 3688.929463476935 3623.449550414599 4229.349716042506 3417.057027815212 3205.762445419471 4072.52967813634 3641.3303216965483 0.9839870445331694 0.8785064392588046 1.0133102768571944 0.9454736474289867 1.0130719098722716 0.9950894948542821 1.16148477133269 0.938408967583901 0.8803822125991196 1.1184180830479806 1.0 11.830249904834156 -4.3527003875613 16.236163790202863 0.9644150439545376 0.9777088804067077 0.0 0.08810057256998896 0.0 0.0 0.010578869698291428 0.0 4.4391478764298235e-05 4.3527003875613 0.013293836452170082 TSSEEEDS(ph)RR ddPTM_A549_PD325901_60min_R1 1 TSSEEEDSRR 10 1 A0A087WZV0;O43314;O43314-2;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.169)S(0.169)S(0.014)EEEDS(0.648)RR 66.258 0.0041481 3040600.0 367.72 325.43 238.06 147.79 501.16 394.52 178.52 428.86 443.61 331.8 354.89 True False 405.0506636988436 352.85512819668446 254.21618317107328 156.91865264455723 465.9602505081412 391.30715992268915 185.31367628989236 420.3060508658385 424.9666143953298 310.8500913746576 311.2407798330653 1.3014061458016313 1.1337046783713212 0.8167830170179586 0.5041712487956138 1.4971053946017616 1.2572490023080127 0.5954029429860886 1.3504208898694785 1.36539503153559 0.9987447388526104 1.0 8.281887289329298 -6.78060461934839 24.99977167583885 1.1707829743095013 0.9441912803259983 0.10653218521499974 0.2934592006248732 416.7217037516108 543584.7442243637 0.0436218928329095 0.08252865811473614 1.65727805884028e-07 6.78060461934839 -0.22659169398350298 TSSFT(ph)EQLDEGTPNR ddPTM_A549_MK2206_60min_R1 2 TSSFTEQLDEGTPNR 15 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71;C9J0Y3;C9JHJ5 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 T(0.001)S(0.001)S(0.236)FT(0.761)EQLDEGTPNR;T(0.001)S(0.001)S(0.245)FT(0.753)EQLDEGTPNR 276.3 5.427199999999998e-106 238520000.0 6798.4 8271.0 7678.7 7068.9 10887.400000000001 8419.2 8805.6 9453.7 12495.7 11977.4 11705.5 True False 7945.803715077989 8691.958571702662 8767.655123746552 8800.780817334984 9285.877882451576 9310.114155787343 10405.463538467402 10793.790925742023 9665.44390153256 9271.69702133443 8798.701294634935 0.9030655148985447 0.987868354731242 0.9964715052996158 1.000236344277458 1.0553691472755984 1.0581236757593129 1.18261356875613 1.2267481943413179 1.0985080158848133 1.0537574479301743 1.0 13.103074879541671 -6.083745362726495 0.9839292347970131 1.0733451939862273 0.9228786921172822 0.4595979052708318 0.0644552264764395 0.7760877968340905 1.1323178988904512 0.01232904700369859 0.09060812172363954 8.246214686480543e-07 6.083745362726495 -0.15046650186894506 TSSGDPPS(ph)PLVK ddPTM_A549_MK2206_60min_R1 2 TSSGDPPSPLVK 12 0 Q99618;F5GX58;F8WDL1 Q99618 CDCA3 Cell division cycle-associated protein 3 1 TSSGDPPS(1)PLVK;TSS(0.004)GDPPS(0.996)PLVK 167.73 1.474e-15 141103000.0 33710.0 38419.0 33555.0 30961.0 44606.0 33368.0 30958.0 29715.0 51003.0 45699.0 50522.0 True False 39399.423869627986 40374.36299918321 38313.60356275357 38546.44638989212 38044.51648921091 36898.97961211421 36582.66787315728 33927.19224837093 39450.90193505487 35375.564160666116 37975.9930637347 1.037482385345509 1.0631548971326006 1.0088901032410729 1.0150214195900034 1.0018043879816707 0.9716396237535396 0.9633103685204752 0.8933852550328648 1.0388379276572135 0.931524400199244 1.0 15.2128000709231 -5.851206980914236 5.387108134443242 1.0015276585040012 1.0500659133182175 0.16172215236424492 0.04356546835353756 0.2670505551290237 12.305804729585343 0.005947534853917314 0.019436139937558126 1.4086173038547718e-06 5.851206980914236 0.048538254814216364 TSSGDPPS(ph)PLVK ddPTM_A549_PD325901_60min_R1 4 TSSGDPPSPLVK 12 0 Q99618;F5GX58;F8WDL1 Q99618 CDCA3 Cell division cycle-associated protein 3 1 TSSGDPPS(1)PLVK;TSSGDPPS(1)PLVK;TSSGDPPS(1)PLVK;TSSGDPPS(1)PLVK 143.98 8.8704e-12 186638000.0 50097.3 55559.0 52908.7 52675.7 57376.0 54882.0 51316.0 56014.0 62549.0 67547.0 72911.0 True False 55183.141016316935 60241.15191432743 56499.40254785918 55929.35835380541 53346.10769645448 54435.059188069084 53268.85846119266 54896.75682786705 59920.28305000669 63282.070892356904 63943.40922090972 0.8629996693743982 0.9421010335280708 0.8835844575109654 0.8746696342164426 0.8342706206382582 0.8513005460814346 0.833062533108941 0.8585209562131951 0.9370830204407141 0.9896574434079978 1.0 15.96450804476548 -9.160114920020249 1.3629602720995997 0.9815329466873391 0.8681092402493087 0.7156540828758319 0.030616257144803108 0.15725012176078912 0.6031305655434103 0.007655852432905933 0.006953629800160852 6.916479275822992e-10 9.160114920020249 -0.11342370643803046 TSSGLS(ph)NSFAGK ddPTM_A549_PD325901_60min_R1 1 TSSGLSNSFAGK 12 0 Q9P0U3;Q9P0U3-2;F8VRZ8 Q9P0U3 SENP1 Sentrin-specific protease 1 1 TS(0.001)S(0.001)GLS(0.662)NS(0.336)FAGK 81.431 3.8421e-05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TSSGS(ph)IREK ddPTM_A549_MK2206_60min_R1 1 TSSGSIREK 9 1 E9PH82;Q8NCA5 E9PH82 FAM98A Protein FAM98A 1 T(0.026)S(0.132)S(0.132)GS(0.71)IREK 44.299 0.016397 6257900.0 3999.4 4540.5 3547.6 3586.3 4718.1 3511.5 3316.5 3153.5 5163.5 5097.6 5442.7 True False 4674.400944057853 4771.5920559564665 4050.703024861408 4464.943660995125 4024.0737400292765 3883.084599254947 3919.065120528655 3600.518282188717 3993.9754944151473 3946.048619563042 4091.127379121743 1.1425703750786962 1.1663269347973226 0.9901190184234709 1.0913724377737735 0.9836099850044607 0.9491478116940331 0.9579425809445157 0.8800797307273412 0.976253028638905 0.9645381954375016 1.0 11.998282741557162 -5.862019711765391 0.9340716999062002 0.9751925923075997 1.189127288722825 0.6690554584784512 0.04791762104498296 0.47883685722531444 0.5357558064188427 0.007506982636298295 0.08351633837478152 1.3739796113870864e-06 5.862019711765391 0.21393469641522533 TSSGS(ph)IREK ddPTM_A549_PD325901_60min_R1 1 TSSGSIREK 9 1 E9PH82;Q8NCA5 E9PH82 FAM98A Protein FAM98A 1 T(0.019)S(0.106)S(0.106)GS(0.768)IREK 54.471000000000004 0.0054917 10354000.0 3917.9 4349.3 4686.6 4444.6 5082.7 4512.8 4611.2 4516.9 4846.9 4959.8 5611.6 True False 4315.642323794461 4715.830774869678 5004.660858815224 4719.13284758102 4725.708686363098 4476.049253014075 4786.681739345459 4426.8068860605 4643.201648548777 4646.637381555235 4921.408774863279 0.8769119821619275 0.9582278145551296 1.0169163115198163 0.9588987754247504 0.9602349454286863 0.9095056837944584 0.9726242948551733 0.8994999376339106 0.9434700227025479 0.9441681425222237 1.0 12.264855637134094 -10.571204256387402 0.9520248239873401 0.998822110858393 0.9464562243661643 0.0 0.039741627272431364 0.6390750034195415 1.0686204943943456 0.02153940440165409 0.006546194627146642 2.6840817775516612e-11 10.571204256387402 -0.05236588649222873 TSSGTKPSVKPTS(ph)ATK ddPTM_A549_PD325901_60min_R1 1 TSSGTKPSVKPTSATK 16 2 Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0 Q14966-3 ZNF638 Zinc finger protein 638 1 TSSGTKPSVKPT(0.189)S(0.808)AT(0.003)K 82.609 3.9841e-05 28374000.0 3827.4 3929.7 4391.2 3873.7 4627.8 4267.1 3437.8 3954.0 4659.6 4145.6 4297.3 True False 4215.95483041704 4260.869610283347 4689.213238430716 4112.969651188991 4302.759293043294 4232.350152352497 3568.627360236344 3875.134368147005 4463.773216195485 3883.8461085074778 3768.759342829137 1.118658541686613 1.1305761983424478 1.2442326006708115 1.091332525387907 1.1416911778222731 1.1230088650806107 0.9468971180201287 1.0282254757179623 1.1844145009388192 1.0305370428858287 1.0 11.879873958148854 -7.5368628386662975 24.99608092189289 1.072673051441242 1.1455157478125486 0.317011991211136 0.06807623080044418 356.0970950694132 636509.6023425078 0.012962085482638446 0.019230570603980257 2.9049399641319375e-08 7.5368628386662975 0.07284269637130669 TSSIQSRPLPS(ph)PPK ddPTM_A549_MK2206_60min_R1 1 TSSIQSRPLPSPPK 14 1 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 T(0.001)S(0.001)S(0.001)IQS(0.003)RPLPS(0.995)PPK 56.215 0.0040357 8771800.0 1491.8 1778.6 1632.0 1757.4 2317.9 1798.0 1313.0 1561.8 3299.0 2651.5 2661.3 True False 1743.5793689917266 1869.123142985172 1863.442140200083 2187.9630788926843 1976.9399805035637 1988.2631665841946 1551.5551042527125 1783.1899328119036 2551.7817674204653 2052.524308453273 2000.4257618565616 0.8716041365981709 0.9343626635014289 0.9315227666687583 1.093748701207523 0.9882596086289145 0.9939199966805671 0.7756124390303493 0.891405203238812 1.2756193286834097 1.026043729085132 1.0 10.96609137423602 -8.74174227901568 24.99117200617147 1.130153588886704 0.9386244047594267 0.3376221254179108 0.10085401298635051 201.6405014486193 255836.09808619635 0.020908658859317152 0.0236917544761056 1.8124153051995097e-09 8.74174227901568 -0.19152918412727737 TSSIQSRPLPS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 TSSIQSRPLPSPPK 14 1 P56945-6;P56945-5;P56945-8;P56945-4;P56945-7;P56945;P56945-3;P56945-2;A0A2R8Y4C2;A0A2R8Y5E4;A0A2R8YFK2;A0A2R8Y596;A0A2R8Y5C9;A0A2R8Y6M6;A0A2R8YFS8;A0A2R8Y8C4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 T(0.002)S(0.002)S(0.002)IQS(0.002)RPLPS(0.994)PPK;TSSIQS(0.002)RPLPS(0.998)PPK 65.225 0.001333 19433300.0 4496.7 4601.2 4415.2 4985.0 4978.1 5281.6 5028.0 5284.2 4849.7 5925.9 6158.4 True False 4953.201673704422 4988.959271912806 4714.842022754445 5292.912128243571 4628.4554295126845 5238.588400708901 5219.3432914271725 5178.802485625293 4645.883974286044 5551.737662679576 5400.955841314067 0.9170972359772702 0.9237178415254325 0.8729643717300439 0.9799954459460627 0.8569696856448598 0.969937276775501 0.9663739983767934 0.9588677704065948 0.8601966227436675 1.0279176178801757 1.0 12.39899903739975 -8.430912513168929 0.007209526609050442 1.8568698270539297 1.0712972637865517e-05 0.18404879476004932 0.04978946404913053 3328.602124519404 18.741444828248152 2405.3825871792355 2420.07783296394 3.7075540140589955e-09 8.430912513168929 -1.8568591140812918 TSSISGPLS(ph)PAYTGQVPYNYNQLEGR ddPTM_A549_MK2206_60min_R1 2 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 TSSIS(0.003)GPLS(0.996)PAYTGQVPYNYNQLEGR;T(0.001)S(0.001)S(0.001)IS(0.012)GPLS(0.983)PAY(0.001)T(0.001)GQVPYNYNQLEGR 118.68 1.2573000000000001e-17 15388800.0 1075.05 1500.8899999999999 1435.8899999999999 1431.73 2142.6000000000004 1312.0900000000001 1322.7800000000002 1237.1100000000001 1826.17 2077.7 2502.4 True False 1256.4921575509813 1577.2788901804872 1639.5207933161146 1782.503914272802 1827.4263782850567 1450.9344929051479 1563.1120036583422 1412.4741309904803 1412.5454107942492 1608.3461269746806 1880.9850172734587 0.6679968984401069 0.8385387845708616 0.8716288424735283 0.947643866327331 0.9715262809131586 0.7713695109641643 0.8310071527970582 0.7509225847199473 0.7509604796543111 0.8550552567962632 1.0 10.877272641980735 -10.937891359091896 1.2183760072704206 0.9992344015355773 0.8221576919689496 0.09413765601451995 0.09339910278061166 0.4239389489718489 1.12624311759301 0.06184094787219195 0.014772094316960213 1.1537418359395074e-11 10.937891359091896 -0.1770767095666277 TSSISGPLS(ph)PAYTGQVPYNYNQLEGR ddPTM_A549_PD325901_60min_R1 2 TSSISGPLSPAYTGQVPYNYNQLEGR 26 0 Q01082-3 Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 TSSIS(0.001)GPLS(0.999)PAYTGQVPYNYNQLEGR;TSSIS(0.001)GPLS(0.999)PAYTGQVPYNYNQLEGR 147.54 6.394899999999999e-33 13446500.0 2725.0 2632.2 2566.0 2704.4 3105.6000000000004 2580.4 2636.0 3086.8 2872.6 3129.7 3641.3 True False 3001.6399939610246 2854.0247317067037 2740.144190611499 2871.4446458619686 2887.473369738376 2559.386077928892 2736.3144224745465 3025.231352452244 2751.874611735587 2932.090207882056 3193.443184102514 0.9399384366390744 0.8937139529879563 0.8580532148661321 0.8991688532792733 0.9041881139807634 0.8014503250503837 0.8568539550339803 0.9473258730615106 0.8617264980428875 0.918159503346884 1.0 11.640897067804511 -10.830268084352893 0.8074619565561981 1.0093951070138998 0.8818357524824749 0.21258873827918878 0.04555111529732598 0.46595292634026336 0.4709708498639893 0.039313334899024596 0.007236815864961449 1.4781956354815525e-11 10.830268084352893 -0.12755935453142486 TSSKDDKGSTS(ph)STSGSSGSSTK ddPTM_A549_PD325901_60min_R1 1 TSSKDDKGSTSSTSGSSGSSTK 22 2 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 T(0.002)S(0.002)S(0.002)KDDKGS(0.07)T(0.07)S(0.416)S(0.416)T(0.012)S(0.008)GS(0.001)SGSSTK 90.09700000000001 3.7861999999999993e-07 9097200.0 558.87 600.98 813.28 466.82 681.86 533.07 416.84 371.1 522.95 687.02 810.41 True False 615.6060709816511 651.6266937394934 868.4740714499309 495.6544111748577 633.968505889299 528.7288546587954 432.70307430360003 363.6981193776817 500.97223010761206 643.6414399524332 710.7347076122584 0.8661545079876629 0.9168353349854818 1.2219384562878661 0.6973831527659997 0.8919903574417261 0.7439187210022162 0.6088109524822325 0.5117213433962442 0.7048652960689766 0.9056001248549861 1.0 9.473167342538863 -6.288582116040776 24.973296170096386 0.8000980431277911 0.9931621515074195 0.2940442352626691 0.15850399349901145 930.509387106828 856134.8728669544 0.02647203625179706 0.06152997885134368 5.145385093005464e-07 6.288582116040776 0.1930641083796284 TSSKES(ph)S(ph)PIPS(ph)PTSDR ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.003)S(0.004)S(0.049)KES(0.972)S(0.972)PIPS(0.917)PT(0.076)S(0.007)DR 141.97 2.9932e-14 24219000.0 4472.9 4921.2 4460.4 4157.3 5536.6 5429.7 4709.1 5512.6 5221.0 5096.6 4758.0 True False 4926.985515225056 5335.9267949529 4763.1095665641205 4414.086979086662 5147.7283162330905 5385.482323411298 4888.307377418399 5402.646868448957 5001.579526516573 4774.799806208804 4172.796163447056 1.180739562211201 1.2787413010236781 1.1414671074250173 1.0578247309929178 1.233640013697833 1.290617157527884 1.171470444743765 1.2947305971413539 1.1986158275186098 1.1442686436579845 1.0 12.02679873290141 -10.465068425113081 0.8202328386918224 1.0009793488607226 1.2053661708155325 0.23501786490958165 0.07846082899957658 0.3713770291709199 0.4544701695194342 0.044807584581655256 0.01335328092655517 3.427137861435166e-11 10.465068425113081 0.20438682195480995 TSSKES(ph)S(ph)PIPS(ph)PTSDRK ddPTM_A549_MK2206_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.065)S(0.08)S(0.277)KES(0.762)S(0.817)PIPS(0.869)PT(0.107)S(0.023)DRK 85.73700000000001 1.5210999999999999e-05 56485000.0 15351.0 16015.0 16547.0 15346.0 22030.0 15424.0 16297.0 15823.0 22917.0 22555.0 23797.0 True False 17941.873504083633 16830.095094404307 18893.613415374253 19105.770688908106 18789.416182964545 17056.15744237742 19257.953948215138 18065.958705905192 17726.33609092901 17459.809834872176 17887.548136211848 1.0030370494300338 0.9408832874268097 1.0562438894085049 1.0681045017136848 1.0504187628111503 0.9535212602921611 1.0766122780812546 1.0099740092009686 0.990987471057787 0.9760873710537359 1.0 14.126668028865092 -8.526703115005983 21.81503796027075 0.9959933618654556 1.0215078790447571 0.09619783931302361 0.041725517447045966 48.483524592820814 276550.9216064582 0.006908462623053669 0.007859442103961656 2.9736981659454263e-09 8.526703115005983 0.025514517179301532 TSSKES(ph)SPIPS(ph)PTSDRK ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.012)S(0.013)S(0.084)KES(0.481)S(0.411)PIPS(0.882)PT(0.099)S(0.019)DRK 86.625 1.2338e-05 16910000.0 2405.5 2601.4 2337.0 2778.9 2962.0 3009.8 2934.2 3103.7 2849.8 2878.5 3325.7 True False 2649.7045891644943 2820.6291076140933 2495.602873522633 2950.5463416601956 2753.959338345267 2985.28918669601 3045.8625866558505 3041.7942686944516 2730.032816446452 2696.7510187521175 2916.65998334928 0.9084722265506473 0.96707505287438 0.8556372315489666 1.011618206614541 0.9442167938899825 1.0235300664933598 1.04429813692517 1.0429032818564872 0.9360133961557909 0.9246024679418973 1.0 11.510101495057361 -6.279854075762099 24.83702386716982 0.9839801584106672 0.916062848614116 0.3684651537945344 0.04613582017466836 685.1727373357837 924133.2847150613 0.006577515144473875 0.015310341256964767 5.249838267458391e-07 6.279854075762099 -0.0679173097965512 TSSKESS(ph)PIPS(ph)PTSDR ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.072)S(0.081)S(0.081)KES(0.358)S(0.408)PIPS(0.548)PT(0.362)S(0.09)DR 62.06399999999999 0.0010906 16206000.0 5023.4 5241.5 5924.0 5796.0 5808.2 5363.1 5210.1 6164.4 6473.0 4998.9 6780.4 True False 5533.371869968372 5683.219600045851 6326.038263905894 6154.005756328939 5400.252069202223 5319.42469173014 5408.373206576119 6041.446206121747 6200.962320463851 4683.268600882387 5946.4537844969345 0.930533065672601 0.955732577097065 1.06383375590988 1.0349034869106553 0.908146647550054 0.8945541131755653 0.909512358555001 1.0159746338014883 1.0428000528029746 0.7875733623108596 1.0 12.537813846740995 -8.405020626088408 9.35251069967047 1.0206845027181708 0.9596045356866149 0.0 0.08636145673366058 0.4252483660290874 31.55489046057825 0.009174250178002264 0.011090358622683821 3.9353138489849536e-09 8.405020626088408 -0.06107996703155594 TSSKESS(ph)PIPS(ph)PTSDRK ddPTM_A549_MK2206_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.034)S(0.037)S(0.037)KES(0.238)S(0.662)PIPS(0.762)PT(0.122)S(0.108)DRK 58.479 0.0050325000000000005 8639800.0 1338.9 1155.2 1067.4 1136.4 1910.6 1368.7 1149.6 1239.9 2364.0 2004.0 2057.9 True False 1564.8735870378214 1213.9947457418587 1218.773370373511 1414.8180510149348 1629.553270956516 1513.5349255304707 1358.467439336572 1415.6596220344982 1828.5577745322748 1551.2950081615536 1546.8666348493657 1.011640920931887 0.7848089281853815 0.7878981567743204 0.9146347972995811 1.0534542760470118 0.9784521117929854 0.8782059220437319 0.9151788461533114 1.1821043478065194 1.002862802269065 1.0 10.595133102951657 -8.738048473377177 24.034187974965924 1.0859937048000456 0.9123424537551085 0.3304693201990869 0.09076239459005281 115.53113497054466 118708.12176660563 0.01742656759461441 0.019752738119287416 1.8278961858133821e-09 8.738048473377177 -0.17365125104493717 TSSKESS(ph)PIPS(ph)PTSDRK ddPTM_A549_PD325901_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.064)S(0.069)S(0.068)KES(0.335)S(0.497)PIPS(0.473)PT(0.235)S(0.258)DRK 55.733999999999995 0.0087405 18083000.0 2129.0 2194.9 2195.1 2625.6 2908.0 3032.9 2408.4 2453.3 2908.2 2738.5 2334.4 True False 2345.134512713038 2379.8719260022203 2344.072686208614 2787.777348829754 2703.752112055381 3008.2010679547907 2500.0529799270494 2404.3670069233804 2785.978467537923 2565.5906426446672 2047.283598980834 1.1454859081958544 1.162453471119953 1.144967256796042 1.3616957368376066 1.3206534323829615 1.4693621682175906 1.2211561608619392 1.1744181451560045 1.3608170694694284 1.2531681707028053 1.0 10.999495249506804 -10.906943263957126 1.0843746924004554 0.9954588496772446 1.2706991451277918 0.017834975139254583 0.12495320419217537 0.3859205439629487 0.7836344254170506 0.08268378882731002 0.018364832800015628 1.2389584329510277e-11 10.906943263957126 0.2752402954505472 TSSLAPVVGTTTTTPS(ph)PSAIK ddPTM_A549_MK2206_60min_R1 2 TSSLAPVVGTTTTTPSPSAIK 21 0 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 TSSLAPVVGTTTTT(0.03)PS(0.959)PS(0.011)AIK;TSSLAPVVGTT(0.001)T(0.004)T(0.029)T(0.194)PS(0.754)PS(0.019)AIK 195.97 2.1934e-55 5506000.0 1262.74 1668.0300000000002 1950.8400000000001 1858.26 2833.5 1541.33 1600.42 1737.13 2385.6 2516.3 2860.8 True False 1475.859640971049 1752.925602267826 2227.498446561232 2313.533783420461 2416.695903514752 1704.43251754795 1891.195597827972 1983.3734972375084 1845.265409020387 1947.8660823537516 2150.3844059366643 0.6863236344611577 0.8151684868195864 1.0358605840014816 1.0758698663519801 1.1238436703888242 0.7926175956458973 0.879468616218971 0.9223343936841798 0.85810955656397 0.9058222692539013 1.0 11.0703788658567 -11.750367848569718 0.008733333396592692 1.9112671546059838 7.863667873833427e-06 0.03186896141202822 0.12343551786429975 22166.343745758935 30.30282314525305 3529.9107555643564 3111.8246308189746 1.7767738403969453e-12 11.750367848569718 -1.91125929093811 TSSLAPVVGTTTTTPS(ph)PSAIK ddPTM_A549_PD325901_60min_R1 2 TSSLAPVVGTTTTTPSPSAIK 21 0 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 TSSLAPVVGTT(0.001)T(0.004)T(0.026)T(0.032)PS(0.922)PS(0.015)AIK;TSSLAPVVGTTTT(0.002)T(0.018)PS(0.973)PS(0.007)AIK 221.24 1.4860999999999996e-75 8756100.0 2498.5 2623.2 2168.4 2837.0 2639.0 2872.2 2345.8199999999997 2349.8999999999996 2374.0 2905.6000000000004 2832.6 True False 2752.1458807015124 2844.2662701212 2315.560663648472 3012.2350467055207 2453.6457440557615 2848.809755474873 2435.0914637819587 2303.0294010391112 2274.2290358073815 2722.1399201272015 2484.2081573308387 1.1078563898037272 1.1449387853138788 0.9321121729736327 1.2125533996885436 0.9876973219072289 1.146767732433413 0.9802284307762464 0.9270678039772661 0.9154744255613951 1.0957777077151252 1.0 11.278570349914062 -7.891924940816312 6.404354758923962 0.9563997922295667 1.0848057906870732 0.24802298996930539 0.08580529001910456 0.15669300466378802 8.4107335774335 0.011094718276842651 0.015386539427238829 1.2825522272054062e-08 7.891924940816312 0.12840599845750644 TSSLT(ph)QFPPSQSEER ddPTM_A549_MK2206_60min_R1 1 TSSLTQFPPSQSEER 15 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 TS(0.004)S(0.142)LT(0.855)QFPPSQSEER 172.43 2.8888999999999998e-27 10025000.0 5144.1 5012.0 5204.8 5335.5 7434.8 5971.1 6082.7 6557.9 8947.0 8622.8 9303.1 True False 6012.298318829828 5267.089392017135 5942.9189039910525 6642.697739519693 6341.150768820008 6602.957838704603 7187.847854255889 7487.502407726456 6920.518785423127 6674.903491205316 6992.883517501888 0.8597738406169876 0.7532070824338185 0.8498524091123542 0.949922549531142 0.9068005713164371 0.9442396433715258 1.0278803924398343 1.070731750212431 0.989651660592137 0.954528053341554 1.0 12.771671758658547 -6.5317330190949825 0.9038732427518721 1.002151711560832 0.7958146563968075 0.7362108336243497 0.044252851865892014 0.23642290985658265 0.33746874845244473 0.006823503265456229 0.030978691228577927 2.939456116276478e-07 6.5317330190949825 -0.20633705516402456 TSSPRS(ph)PPSSSEIFTPAHEENVR ddPTM_A549_MK2206_60min_R1 1 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 T(0.021)S(0.021)S(0.021)PRS(0.867)PPS(0.028)S(0.02)S(0.024)EIFTPAHEENVR 63.203 0.00021972 16366000.0 2086.2 2175.1 1825.6 1905.6 2510.8 1919.2 1885.1 2034.3 2525.3 2746.9 2895.7 True False 2438.299557306971 2285.8032993967436 2084.4975313414657 2372.472085545635 2141.464646036649 2122.2884701381463 2227.598268870364 2322.668254782466 1953.3235820754478 2126.3733821950955 2176.617772745666 1.120224041096205 1.0501629307718767 0.957677345762 1.0899810316962133 0.9838496555761034 0.975039575947693 1.02342188727991 1.0670997378894718 0.8974123093791765 0.9769163005192268 1.0 11.087872368449412 -2.0000000000013545 0.302504076023851 0.9598834879632746 2.213148845950196 0.2750617470265755 0.05262523877425957 40.50129640436809 0.506511613890527 0.019614789140917386 28.014887502722644 0.009999999999968812 2.0000000000013545 1.2532653579869213 TSSPRS(ph)PPSSSEIFTPAHEENVR ddPTM_A549_PD325901_60min_R1 3 TSSPRSPPSSSEIFTPAHEENVR 23 1 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 T(0.275)S(0.275)S(0.074)PRS(0.35)PPS(0.009)S(0.007)S(0.01)EIFTPAHEENVR;T(0.054)S(0.054)S(0.198)PRS(0.675)PPS(0.01)S(0.005)S(0.006)EIFTPAHEENVR;T(0.223)S(0.223)S(0.223)PRS(0.272)PPS(0.011)S(0.02)S(0.027)EIFTPAHEENVR 104.84 9.460099999999998e-11 161292000.0 11557.6 13133.8 13106.1 13674.6 16282.099999999999 12766.0 12830.400000000001 15043.9 16396.0 15539.4 17506.7 True False 12730.919043744567 14240.631419075105 13995.558759381685 14519.248984730097 15138.501466195648 12662.03792855381 13318.667893064285 14743.837612788757 15706.933138625885 14558.23963202941 15353.486884114865 0.8291874764237641 0.9275177376032313 0.9115557179302293 0.9456645968644495 0.9859976160762773 0.8247011264688218 0.867468607853773 0.9602924550020707 1.0230205853027892 0.9482041273042516 1.0 13.906278718476852 -8.519875163434051 4.200236542928126 1.010529063358894 0.9029677677222783 0.39433181272912243 0.04904515937304743 0.12028874846091207 5.053602053289143 0.007750254761613699 0.009078399919712448 3.020819920682685e-09 8.519875163434051 -0.10756129563661565 TSSS(ph)ETEEKKPEKPLILQSLGPK ddPTM_A549_PD325901_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 T(0.22)S(0.22)S(0.22)S(0.311)ET(0.028)EEKKPEKPLILQSLGPK 117.04 5.6096e-16 250710000.0 4524.5 4648.2 4955.4 5271.8 5933.0 5255.6 4922.8 5183.2 5570.0 5423.3 5549.8 True False 4983.823909239142 5039.920126859321 5291.7032432409305 5597.427112873517 5516.286547738852 5212.8001360886265 5110.139847859522 5079.817009858258 5335.912270196763 5080.871912453833 4867.209783080804 1.0239591329232833 1.0354844667634595 1.087214950470336 1.1500279138020852 1.1333570553943129 1.0710037924005555 1.0499115665043206 1.0436815416332599 1.0962979834453084 1.0438982782529227 1.0 12.248879242653862 -10.907780494849966 0.7978046134299221 0.9914603262920826 1.079537207226257 0.190106680751861 0.039585968230005125 0.7924226492973474 0.7438864292256936 0.046961691162783765 0.0076079336967029105 1.2365722753671066e-11 10.907780494849966 0.08807688093417443 TSSS(ph)SPANS(ph)DVEIDGIGR ddPTM_A549_PD325901_60min_R1 1 TSSSSPANSDVEIDGIGR 18 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 T(0.005)S(0.007)S(0.068)S(0.707)S(0.213)PANS(1)DVEIDGIGR 129.88 1.9941e-12 4153600.0 617.85 876.04 1103.7 1013.2 993.94 684.17 715.85 974.18 1022.9 772.49 672.39 True False 680.5736771628697 949.8669652626472 1178.603719087261 1075.7830628558459 924.1290833068523 678.5983463558409 743.0920634781505 954.7492156705747 979.911070230569 723.7148495660317 589.6902926313924 1.1541205369447844 1.6107895570470185 1.9986825861215094 1.824318759013901 1.567143117081144 1.1507707602370585 1.2601395559052344 1.6190689037972275 1.6617385133777307 1.227279571343421 1.0 9.2038136347607 -10.831807610322633 0.8712269191429113 0.9678262897143667 1.5540872829763164 0.26815906545316726 0.2602465331278984 0.6152096621900605 0.7520804129484927 0.2478663663581907 0.04914113464395945 1.4729648719402272e-11 10.831807610322633 0.5862609932619497 TSSS(ph)SPANSDVEIDGIGR ddPTM_A549_MK2206_60min_R1 1 TSSSSPANSDVEIDGIGR 18 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 T(0.01)S(0.01)S(0.059)S(0.459)S(0.459)PANS(0.002)DVEIDGIGR 70.529 0.0011700999999999999 2879000.0 372.83 408.98 257.99 310.1 475.26 254.23 335.0 556.51 491.01 614.2 389.55 True False 435.75458918164964 429.7953351051814 294.57686136655616 386.0745139209179 405.3498835731148 281.132449855784 395.8651636897632 635.3969967403972 379.79701898184965 475.4517934195743 292.813983966942 1.4881618127597531 1.4678101410406146 1.006020468611954 1.3184975276471251 1.3843255642424437 0.960105955484432 1.351933942247975 2.1699680736973685 1.2970590196427498 1.6237332212701006 1.0 8.193840644072946 -10.021822351403053 1.2367618998689631 1.0458926148663326 1.3719113496399402 0.0 0.34530013009797456 0.5438135875764086 1.669168182948231 0.09675425360539376 0.05617180829890555 9.509937190480436e-11 10.021822351403053 0.32601873477360765 TSSS(ph)SPANSDVEIDGIGR ddPTM_A549_PD325901_60min_R1 2 TSSSSPANSDVEIDGIGR 18 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 T(0.085)S(0.085)S(0.075)S(0.389)S(0.34)PANS(0.027)DVEIDGIGR;T(0.002)S(0.002)S(0.013)S(0.866)S(0.117)PANSDVEIDGIGR 162.41 6.4821e-23 4319300.0 1084.6799999999998 951.81 1304.17 1044.5 1364.15 946.0 1149.49 1061.99 759.61 1090.3200000000002 812.87 True False 1194.7959151007876 1032.022369077485 1392.6788188113017 1109.0163927683875 1268.3368100620173 938.2960896452998 1193.2344709750632 1040.8077763349618 727.6862333149305 1021.4770091248255 712.892143207484 1.6759841253476233 1.447655692254024 1.953561744340853 1.5556580379447573 1.7791426405058215 1.3161823967138506 1.6737938303070592 1.4599793057784332 1.0207522137091933 1.432863328425727 1.0 9.477540010861617 -8.670130030608096 3.0825448156870494 1.006502487933535 1.6240829988222973 0.4784538981095997 0.20276523980287386 0.08024838085586888 1.5180849389103728 0.025586163970235484 0.028671751576274503 2.1373220654891853e-09 8.670130030608096 0.6175805108887624 TSSS(ph)YTR ddPTM_A549_MK2206_60min_R1 2 TSSSYTR 7 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 TSS(0.067)S(0.898)YT(0.034)R;TSS(0.162)S(0.809)YT(0.029)R 110.55 0.0083615 168234000.0 7078.6 8486.3 6459.0 6124.7 9821.0 7077.9 6927.5 7570.299999999999 10638.2 9623.6 10929.099999999999 True False 8273.294624845706 8918.216422082003 7374.983323255108 7625.25177494823 8376.343909800027 7826.878680070228 8186.1370789875655 8643.413208071417 8228.664685714572 7449.622076119532 8215.102842184846 1.00708351237699 1.0855879218318052 0.8977347532868738 0.9281991864778967 1.0196273948984793 0.9527426290854117 0.9964740839215621 1.052136945101549 1.001650842818435 0.9068203063588512 1.0 13.004062920577713 -7.9910966620452575 24.568751432265135 1.0055889778716578 0.9813871732941898 0.0 0.05688610704561246 431.4158899403766 1190483.356314061 0.007577647264800211 0.010460308065495876 1.020712275854263e-08 7.9910966620452575 -0.02420180457746801 TSSS(ph)YTR ddPTM_A549_PD325901_60min_R1 1 TSSSYTR 7 0 O14974-5;O14974-4;O14974-2;O14974;O14974-3;F8VZN8;H0YIS4;H0YHI8;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 TSS(0.164)S(0.806)YT(0.03)R 106.94 0.0093854 70465000.0 3695.2 2701.2 3427.6 3524.5 4209.8 3706.0 3326.0 3774.6 4138.9 4629.9 4480.0 True False 4070.333983737533 2928.839603862226 3660.2175478331947 3742.2003602797363 3914.118171021574 3675.8195647203843 3452.572750057035 3699.312641883583 3964.9564264124597 4337.567323856321 3928.9884010598594 1.0359750572538073 0.7454436880170378 0.9315928616245945 0.9524589991841828 0.9962152522429759 0.9355638626290722 0.8787434315473395 0.9415432839877256 1.0091545257152956 1.1039908701909749 1.0 11.939942193421242 -8.6794122204579 4.465167006615826 1.0043756705787819 0.921977477921375 0.27153966125395823 0.0755517666551992 0.22838899108673494 8.432975651939238 0.011296848658713643 0.012724506446405966 2.092125724540746e-09 8.6794122204579 -0.08239819265740689 TSSSET(ph)EEKKPEKPLILQSLGPK ddPTM_A549_MK2206_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 T(0.184)S(0.184)S(0.184)S(0.202)ET(0.244)EEKKPEKPLILQSLGPK 63.901 0.00017753 90155000.0 2031.3 2147.1 2401.2 2485.2 3681.3 3371.7 2899.1 3457.9 4412.7 4419.3 4026.4 True False 2374.133779483103 2256.378218994411 2741.7262665738 3094.074111564869 3139.7856465886234 3728.491056046677 3425.828943441765 3948.067914374618 3413.2304956339135 3420.977060662851 3026.5337570132087 0.7844398807651368 0.7455321500266892 0.9058964765288208 1.0223160750793387 1.0374196683955639 1.2319344026501815 1.1319315158812595 1.3044850087087223 1.1277688503307242 1.130328400512838 1.0 11.563450727170284 -6.14590157226071 1.564359042095131 1.0977355073182171 0.7537505088489921 0.7388242639856045 0.08481883343424743 0.2058160214994003 0.9248355915698034 0.014796621574210033 0.06387354409157336 7.146582766204758e-07 6.14590157226071 -0.34398499846922503 TSSSETEEKKPEKPLILQSLGPK ddPTM_A549_MK2206_60min_R1 2 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 0 ; 99.185 3.0716999999999996e-08 36692000.0 6585.0 7147.9 7144.799999999999 7234.700000000001 10186.8 7569.4 8509.5 8926.5 11754.2 12798.2 11268.6 False True 7696.38701220707 7511.697578850619 8158.040075552429 9007.201824778025 8688.33521437236 8370.388883838932 10055.566001247875 10191.858711259729 9091.892467600377 9907.077731264077 8470.29562246152 0.9086326328207246 0.8868282659380987 0.963135224456505 1.063386949670651 1.0257416743912269 0.9882050470165815 1.1871564405122457 1.2032471079560634 1.073385495954888 1.1696259697232407 1.0 13.048196606712665 -6.063015861869764 2.6514544544867826 1.0561215272841713 0.8972962948781126 0.47964215007716815 0.07465083334798289 0.20951075697782282 2.866862193394693 0.01073857382019654 0.03659699318699878 8.649363278656025e-07 6.063015861869764 -0.15882523240605873 TSSSS(ph)PANS(ph)DVEIDGIGR ddPTM_A549_PD325901_60min_R1 1 TSSSSPANSDVEIDGIGR 18 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 T(0.002)S(0.002)S(0.018)S(0.194)S(0.787)PANS(0.998)DVEIDGIGR 136.39 7.778600000000001e-13 4538100.0 1489.9 1342.9 1042.0 1306.7 2060.7 1362.6 1201.6 1349.3 1422.7 1222.4 1529.9 True False 1641.1535511935895 1456.0708959079595 1112.7163860550204 1387.4118912689835 1915.9635410290653 1351.5034373685896 1247.327545540749 1322.3871529946277 1362.9088665725205 1145.2174553839106 1341.7319988351517 1.2231604766215503 1.0852173885485874 0.8293134448765065 1.034045466958744 1.4279778247015371 1.0072827051467217 0.9296398584990434 0.9855821834335631 1.0157832322369549 0.8535366648318378 1.0 10.389880817181137 -7.479375286449573 24.999494397152926 0.9989621639948862 1.1091489896801898 0.20426108936761223 0.1432064133868895 764.312697140223 439216.732207485 0.020563493743038095 0.032871749790617466 3.316077818123283e-08 7.479375286449573 0.11018682568530358 TSSSS(ph)PANSDVEIDGIGR ddPTM_A549_MK2206_60min_R1 1 TSSSSPANSDVEIDGIGR 18 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 T(0.001)S(0.018)S(0.014)S(0.157)S(0.811)PANSDVEIDGIGR 144.33 9.7523e-17 3200400.0 583.28 713.2 635.15 568.94 837.78 840.02 814.65 797.8 1217.4 843.36 801.51 True False 681.7234041731427 749.4988336765007 725.2238206789722 708.3303255406876 714.5436718004548 928.9103588398525 962.6613599995978 910.890593160031 941.6608437883223 652.8443902610423 602.4729464493487 1.1315419359339762 1.2440373266445297 1.2037450394296558 1.1757047842815271 1.1860178552607061 1.5418291631422627 1.5978499377822786 1.5119194953538246 1.5629927440525995 1.0836078102901647 1.0 9.234752649541132 TSSSSDDS(ph)KRSPLGK ddPTM_A549_MK2206_60min_R1 1 TSSSSDDSKRSPLGK 15 2 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 TSSSSDDS(0.559)KRS(0.44)PLGK 72.634 0.00034574 19532000.0 972.36 922.79 955.38 835.74 1227.0 976.67 692.69 878.85 1484.1 1818.8 1355.4 True False 1136.4705960804365 969.7560694452302 1090.8672499413942 1040.4963375177947 1046.5099253970716 1080.020571138924 818.5428066754085 1003.4296788652454 1147.9537196207061 1407.93181678854 1018.8167728630302 1.1154808463613934 0.9518454105541156 1.070719759428274 1.021279159542929 1.027181681016322 1.0600734105543843 0.8034249420287601 0.9848970939548386 1.126751885321618 1.38192838426878 1.0 9.992678900787624 -8.716209459124462 24.99935653254969 1.059855234101917 1.0013076851895453 0.11716159978556528 0.12650463116402097 245.99827752892816 135967.33957976464 0.01462028662342169 0.016577815378512217 1.922164450288651e-09 8.716209459124462 -0.05854754891237168 TSSSSDDSKRS(ph)PLGK ddPTM_A549_MK2206_60min_R1 4 TSSSSDDSKRSPLGK 15 2 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 TSSSSDDS(0.121)KRS(0.877)PLGK;T(0.024)S(0.024)S(0.022)S(0.02)S(0.02)DDS(0.117)KRS(0.775)PLGK;TSSS(0.002)S(0.007)DDS(0.023)KRS(0.968)PLGK;TSSSSDDS(0.167)KRS(0.831)PLGK 107.65 8.3824e-07 147843000.0 9043.0 9927.49 10285.0 9777.7 13951.5 10515.05 10971.680000000002 10693.009999999998 16185.0 15523.3 16797.7 True False 10569.237319876771 10432.756837261813 11743.567654385937 12173.236938937638 11899.252831440303 11627.745611674709 12965.09223627373 12208.77691346971 12519.12334213405 12016.575748599924 12626.36749706457 0.8370766431702508 0.8262674787255531 0.9300828331755852 0.9641123578707591 0.9424129967868186 0.9209098035819071 1.0268267765283965 0.9669271004751016 0.9915063334759223 0.9517048946495171 1.0 13.624152026771768 -4.238694021169559 0.3794213677595462 0.998267470613125 0.46538942986774856 0.721558817702717 0.03150153042281957 3.2119230319289107 0.17437732478782803 0.006587752918364329 0.9219370124729739 5.771729629405714e-05 4.238694021169559 -0.5328780407453765 TSSSSDDSKRS(ph)PLGK ddPTM_A549_PD325901_60min_R1 4 TSSSSDDSKRSPLGK 15 2 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 T(0.001)S(0.003)S(0.003)S(0.003)S(0.018)DDS(0.214)KRS(0.758)PLGK;T(0.002)S(0.004)S(0.012)S(0.01)S(0.01)DDS(0.204)KRS(0.758)PLGK;TS(0.001)S(0.001)S(0.001)S(0.001)DDS(0.016)KRS(0.981)PLGK;TSSSS(0.001)DDS(0.208)KRS(0.79)PLGK 89.04899999999999 1.1655e-05 653854000.0 18559.399999999998 18761.9 18632.600000000002 17790.5 21576.6 19785.2 20249.800000000003 21015.5 20220.3 18374.1 18527.199999999997 True False 20443.536625291836 20343.03115789377 19897.120282925895 18889.378779843 20061.13405122906 19624.07589096216 21020.417220115753 20596.32936615919 19370.511108987375 17213.956190256475 16248.471853597357 1.258182111492885 1.2519965779668005 1.224553327980855 1.1625326338403297 1.2346474322006835 1.2077490158939135 1.2936857945482365 1.2675856260045297 1.1921435617773994 1.0594200085619352 1.0 13.988016420588652 -10.208345462678448 0.6717731470319774 0.9985073691527361 1.236209416456549 0.8079608820555833 0.03790980070903664 0.21006320204396628 0.17777112908474216 0.02558007396501013 0.00833908791223528 6.189485321296153e-11 10.208345462678448 0.23770204730381284 TSSSSSGESCAGDKS(ph)PPGQASSK ddPTM_A549_MK2206_60min_R1 1 TSSSSSGESCAGDKSPPGQASSK 23 1 O43365 O43365 HOXA3 Homeobox protein Hox-A3 1 TSSSSSGES(0.001)CAGDKS(0.997)PPGQAS(0.001)SK 58.477 0.0014248 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TSSSSSGESCAGDKS(ph)PPGQASSK ddPTM_A549_PD325901_60min_R1 2 TSSSSSGESCAGDKSPPGQASSK 23 1 O43365 O43365 HOXA3 Homeobox protein Hox-A3 1 TSSS(0.001)S(0.001)S(0.001)GES(0.004)CAGDKS(0.99)PPGQAS(0.001)SK;T(0.002)S(0.002)S(0.002)S(0.002)S(0.002)S(0.002)GES(0.012)CAGDKS(0.975)PPGQAS(0.001)S(0.001)K 73.34100000000001 3.5594e-05 19404700.0 2261.42 2554.02 2466.92 2363.0299999999997 2874.44 2993.3999999999996 2617.6 2654.71 2122.57 2191.06 2913.8 True False 2490.9976936305843 2769.2562287339692 2634.3400259950618 2508.988996269492 2672.549250679666 2969.0227428586077 2717.2142004056795 2601.759726470294 2033.365764336006 2052.716097671361 2555.4210721000486 0.9747895252282157 1.0836790300309258 1.0308829549684184 0.9818299706700006 1.045835177559744 1.1618526493634416 1.0633136863713302 1.018133471182565 0.7957067375455987 0.8032790055943445 1.0 11.319345316951752 -8.580370589771368 9.549382531579205 0.9035642894318618 1.0504437634009929 0.5443979876550625 0.07103827588143367 0.27388110817264777 43.27334068441728 0.014375712479870125 0.01630350973363426 2.628024503460004e-09 8.580370589771368 0.14687947396913104 TSSSTS(ph)PLEPPSDR ddPTM_A549_MK2206_60min_R1 2 TSSSTSPLEPPSDR 14 0 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46 A0A2R8Y549 INADL InaD-like protein 1 T(0.007)S(0.007)S(0.008)S(0.059)T(0.174)S(0.744)PLEPPSDR;T(0.001)S(0.004)S(0.003)S(0.024)T(0.094)S(0.876)PLEPPSDR 112.44 7.083e-06 6994600.0 2836.7 2948.1 2483.8 2200.68 3069.1 2321.3 2353.7 2287.1000000000004 3942.7 3778.6000000000004 4401.6 True False 3315.4656093436315 3098.1456976467925 2836.040188620691 2739.8466987922775 2617.6394556121854 2566.9384252457667 2781.3368232137154 2611.3034289499965 3049.684745198139 2925.0116356483272 3308.5612420200036 1.002086818655777 0.9364027052904893 0.857182316168698 0.8281082012311478 0.7911715286896174 0.7758473358886814 0.8406484328866776 0.7892564888282665 0.9217555674853367 0.884073596250706 1.0 11.691988268989594 -9.283120711307816 1.4857332029514272 0.9774224451458113 0.8507052940553832 0.15388231350484594 0.07110041471895617 0.26975544820054226 1.2317803456156862 0.015832012757548704 0.01381314827642167 5.210498661779389e-10 9.283120711307816 -0.12671715109042814 TSSSTS(ph)PLEPPSDR ddPTM_A549_PD325901_60min_R1 2 TSSSTSPLEPPSDR 14 0 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46 A0A2R8Y549 INADL InaD-like protein 1 TSSS(0.004)T(0.016)S(0.98)PLEPPSDR;TSSS(0.001)T(0.015)S(0.984)PLEPPSDR 130.1 1.7788e-21 4095700.0 2462.4 2960.7 2498.4 2826.3 3433.3 3169.6 2727.0 2934.9 2806.9 3416.4 3945.7 True False 2712.3810352769287 3210.2085795775515 2667.9564480996783 3000.8741320069826 3192.1568522420016 3143.787828477531 2830.7774772716593 2876.36111711549 2688.935754257686 3200.6879209535273 3460.403913853098 0.7838336514469899 0.9276976501864609 0.7709956740653886 0.8672034267426206 0.9224809969329829 0.9085031420441839 0.8180482821497098 0.8312212067500274 0.7770583496027792 0.9249463359292119 1.0 11.756724730183734 -10.952896813589515 1.2161680224613287 0.9999778769536588 0.8423976375480723 0.35847965934384585 0.05787267877883921 0.30317224803666365 0.7973222519708982 0.039640354664795596 0.00923864424602775 1.1145593164024476e-11 10.952896813589515 -0.15758023940558652 TSST(ph)DEVLSLEEK ddPTM_A549_MK2206_60min_R1 1 TSSTDEVLSLEEK 13 0 K7ENH8;A0A0A0MRB7;P15923-2;K7EMM4 K7ENH8 TCF3 Transcription factor E2-alpha 1 TS(0.002)S(0.25)T(0.748)DEVLSLEEK 186.51 2.9992e-25 10683000.0 2067.9 1909.4 1590.9 1220.1 2216.4 2262.0 2066.2 1914.5 2961.9 2511.5 2605.4 True False 2416.910964699013 2006.5803042932014 1816.5135421840155 1519.0245547723707 1890.3704960473256 2501.3633386059205 2441.6017946739953 2185.8862379103525 2291.0343791823816 1944.1504056874955 1958.4072746180743 1.2341207041167448 1.0245980651213225 0.9275463616413849 0.7756428269337432 0.9652591269178077 1.2772436923743211 1.2467283114796195 1.1161550849205464 1.1698457255930974 0.9927201715826147 1.0 10.935465106790138 TSSVSNPQDSVGS(ph)PCSR ddPTM_A549_MK2206_60min_R1 2 TSSVSNPQDSVGSPCSR 17 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 TSSVSNPQDSVGS(1)PCSR;TSSVSNPQDSVGS(1)PCSR 279.12 2.1293999999999998e-115 117614000.0 4659.2 5266.4 4538.7 4137.1 6132.4 5189.1 4974.200000000001 4727.1 7508.7 6778.8 6880.8 True False 5445.559053496616 5534.437265386882 5182.355907920418 5150.689685721479 5230.332083541159 5738.207117754195 5877.947752912299 5397.180901136603 5807.991438929992 5247.464371918931 5172.107459580887 1.052870439381375 1.0700545780685222 1.0019814840313395 0.995858985137725 1.0112574273476116 1.1094524161760515 1.136470539107594 1.043516775959244 1.122944850685804 1.014569865944771 1.0 12.336536534635062 -7.2347681078954995 24.69364992892755 1.067944041700118 1.0257757643975962 0.197961421548148 0.04459158326997492 1124.8389488958 1041435.0923684911 0.008091870262848948 0.014013672218118157 5.8241411553723127e-08 7.2347681078954995 -0.04216827730252182 TSSVSNPQDSVGS(ph)PCSR ddPTM_A549_PD325901_60min_R1 2 TSSVSNPQDSVGSPCSR 17 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 TSSVSNPQDSVGS(0.999)PCS(0.001)R;TSSVSNPQDSVGS(1)PCSR 325.38 6.730799999999998e-173 101554000.0 12489.8 11734.400000000001 14088.9 13454.400000000001 12359.3 12700.0 14227.5 14697.6 13440.9 15251.099999999999 17405.3 True False 13757.755301495205 12723.299069880379 15045.05747743819 14285.447730840584 11491.225405270308 12596.575410671581 14768.935298086732 14404.444837955862 12876.025714988811 14288.14294323099 15264.558441287301 0.901287472835341 0.8335189726462463 0.9856202218561784 0.9358572529816234 0.752804311337893 0.8252171498522087 0.9675311182366063 0.9436528998437963 0.8435242830321229 0.9360338196606252 1.0 13.89789823677978 -10.935901246287163 1.080247586865593 1.0029427358846388 0.8846400519895741 0.14670498461507298 0.06889813055204294 0.5895416246040235 1.170590235497146 0.054932021627209476 0.01162346348743966 1.1590408791389185e-11 10.935901246287163 -0.11830268389506471 TSSVSSISQVS(ph)PER ddPTM_A549_MK2206_60min_R1 2 TSSVSSISQVSPER 14 0 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 TSSVSSISQVS(1)PER;TSSVSSISQVS(1)PER 194.67 3.659e-31 15432500.0 5290.3 6404.6 6300.1 5534.200000000001 8358.900000000001 6505.4 6376.1 5756.2 9149.4 9233.4 9725.7 True False 6183.173304583004 6730.566783741613 7193.54891389372 6890.079248439683 7129.3168829678725 7193.797110064971 7534.554836424767 6572.158977623177 7077.07550858951 7147.568527125198 7310.540274335227 0.8457888299022143 0.9206661246871589 0.9839968926985844 0.9424856426314159 0.9752106705432474 0.9840308431539457 1.0306426821661838 0.8989977116596634 0.9680646358566232 0.9777072909669664 1.0 12.835762314957634 -4.205802963306698 0.8479628749403965 0.980310384608148 0.1945040366752653 0.5783265922911215 0.03209864676989973 5.621691307179923 0.7708291664712604 0.004885128435528764 6.29993444150486 6.225826829771046e-05 4.205802963306698 -0.7858063479328827 TST(ph)FER ddPTM_A549_PD325901_60min_R1 1 TSTFER 6 0 Q9H329-2;Q9H329 Q9H329-2 EPB41L4B Band 4.1-like protein 4B 1 T(0.002)S(0.043)T(0.955)FER 78.72800000000001 0.046481 8658500.0 1670.9 2035.1 2177.9 2241.6 2246.6 2036.2 2038.4 2297.7 1580.0 2211.5 2451.4 True False 1840.5285379484333 2206.605019184072 2325.705390776612 2380.05854095703 2088.8065663492503 2019.6178622999582 2115.9724274552805 2251.870570989219 1513.5980945980057 2071.86551258305 2149.893340704941 0.8561022554472083 1.0263788335008914 1.0817771034231973 1.1070588925944664 0.9715861372287146 0.9394037481123293 0.9842220483186679 1.0474336230330572 0.7040340401732225 0.9637061864211804 1.0 11.070049372080074 -8.724582779332227 24.99995466640264 0.8602381289607629 1.0050771895493391 0.1980434857116251 0.09593224191685579 184.02474593081882 124824.50643848271 0.020501208852809066 0.023245880387964813 1.8854595544737295e-09 8.724582779332227 0.1448390605885762 TST(ph)PFGSGR ddPTM_A549_PD325901_60min_R1 2 TSTPFGSGR 9 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 T(0.002)S(0.009)T(0.984)PFGS(0.006)GR;T(0.046)S(0.046)T(0.909)PFGSGR 79.42699999999999 0.0018585999999999997 18878900.0 7222.6 6872.6 6830.4 6518.9 7581.200000000001 7709.5 6695.0 7194.9 8133.5 8117.400000000001 8493.400000000001 True False 7955.833035002905 7451.778121391799 7293.95201853188 6921.557647503914 7048.722665720169 7646.7163880765775 6949.781888644573 7051.392075210141 7791.677280008145 7604.8659786758535 7448.765644098616 1.0680740159016844 1.0004044263757406 0.9792162040042984 0.9292220990987428 0.9462940576341818 1.0265749727452884 0.9330112156435786 0.9466524270093933 1.046036035001478 1.0209565372352547 1.0 12.862785656991237 -8.765961065927293 24.999646238441617 1.0217392380137822 0.9767690411321069 0.1827324823960571 0.04096183381003075 139.8408890130023 773155.6505916475 0.0073884156539505575 0.0079940151610567 1.714110968981221e-09 8.765961065927293 -0.04497019688167525 TST(ph)PSPQPSKR ddPTM_A549_MK2206_60min_R1 2 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.006)S(0.027)T(0.886)PS(0.081)PQPSKR;T(0.004)S(0.022)T(0.908)PS(0.065)PQPSKR 75.669 0.00080211 172654000.0 12377.0 13190.3 13050.8 12584.1 15984.0 11676.9 10719.0 12315.9 16944.2 18474.7 18523.3 True False 14465.93501140272 13861.629929673505 14901.599683408862 15667.205064921718 13632.774773876756 12912.541807501095 12666.503551016634 14061.716540861904 13106.365754327318 14301.25243876361 13923.453392927373 1.0389617146814245 0.9955597608216025 1.0702517014190138 1.1252384464388778 0.9791230946197391 0.9273950537343137 0.9097242755486779 1.0099302338315552 0.9413157342836292 1.0271340044150359 1.0 13.765229462499036 -6.930816954919086 11.068160411944376 0.9662214276429181 1.0539091620230243 0.476495516675439 0.04376062477842103 0.34159467906754054 53.044252889561314 0.006201155587884468 0.01172504691286216 1.1726895229179271e-07 6.930816954919086 0.08768773438010624 TST(ph)PSPQPSKR ddPTM_A549_PD325901_60min_R1 2 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.02)S(0.115)T(0.828)PS(0.037)PQPSKR;T(0.021)S(0.097)T(0.572)PS(0.309)PQPS(0.001)KR 70.622 0.0018169 122865000.0 6377.799999999999 6466.8 6408.0 5802.299999999999 7237.5 7190.7 7132.2 7481.9 6632.4 7809.0 7952.5 True False 7025.269560911794 7011.779931236576 6842.885414434335 6160.694893020595 6729.162968019539 7132.141323268987 7403.61977388959 7332.667635062994 6353.663292792287 7315.9384073077235 6974.392915051007 1.0072947776932661 1.0053606122627372 0.9811442368936695 0.8833306307887501 0.964838524296179 1.0226182278714975 1.0615432574657926 1.051370022362637 0.9109987593444641 1.0489713579972888 1.0 12.76785192790315 -11.849376333986141 0.0018582030967796415 6.245354232065773e-05 1.9374997568860097 0.0 0.05808358649524111 1077991.7777529603 306.0399492562322 161749.36983026704 157363.63507287516 1.414567467963282e-12 11.849376333986141 1.9374373033436891 TST(ph)SDLSR ddPTM_A549_MK2206_60min_R1 1 TSTSDLSR 8 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.278)S(0.131)T(0.47)S(0.121)DLSR 87.806 0.0028626 6323400.0 810.9 866.48 826.15 703.11 970.82 922.23 846.02 733.09 1242.7 1119.7 1070.7 True False 947.7600953984381 910.5801309646858 943.3104927244474 875.3719815638076 828.0136640374774 1019.8197664732717 999.7308829397417 837.0077524939668 961.2304341841198 866.7589923345764 804.8156401833007 1.1776114281061698 1.1314145569503307 1.1720827051889844 1.0876677065625082 1.0288240221684724 1.267147052759813 1.2421862014411749 1.0399993622183263 1.1943486013333373 1.0769658901474228 1.0 9.652514531443561 -10.889043391298511 1.0029178495728146 0.9950726749732319 1.150520427576369 0.22433290112203952 0.07482790269730716 0.5069177271890102 0.8561756023000502 0.05897229010903519 0.012411211394513257 1.2910902715551407e-11 10.889043391298511 0.15544775260313703 TST(ph)SDLSR ddPTM_A549_PD325901_60min_R1 1 TSTSDLSR 8 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.003)S(0.151)T(0.675)S(0.171)DLSR 108.57 0.0018440000000000002 8652900.0 1246.4 1181.7 1197.4 1472.1 1185.6 1035.0 1155.4 1075.1 1567.0 1279.5 1382.4 True False 1372.9336104488161 1281.2860061765107 1278.6627645511348 1563.0282736183283 1102.3275460979578 1026.5713031531566 1199.3693792591403 1053.656287100366 1501.1444393892873 1198.7121516391644 1212.3735637556133 1.1324344669771833 1.0568409312781655 1.0546772074031168 1.2892299208310674 0.909230932653495 0.8467450411679298 0.989273780883023 0.8690855018616679 1.23818638435099 0.98873168095638 1.0 10.243618583752381 -2.0000012211021625 0.9347408593301336 1.0656532553040508 38.925702083888986 0.0 0.1373112697462952 6326.125446150217 11.160019014917461 0.023341432058719684 511932.03898779035 0.009999971883123165 2.0000012211021625 37.86004882858494 TSTPS(ph)PQPSKR ddPTM_A549_MK2206_60min_R1 1 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.004)S(0.004)T(0.054)PS(0.931)PQPS(0.006)KR 55.426 0.013713999999999999 2181000.0 405.64 343.79 337.89 281.73 525.28 375.85 401.96 360.22 498.32 485.57 619.15 True False 474.10211505416527 361.2874425541843 385.807882813852 350.75386264734016 448.0120078342084 415.622197530962 474.99092894548426 411.28228812748324 385.4513156535212 375.8793997569887 465.3979673293086 1.018702590762924 0.7762978524109941 0.8289848901313748 0.753664363125918 0.9626428117104385 0.8930468689324421 1.0206123840016428 0.8837217113079183 0.8282187347431659 0.807651571651627 1.0 8.862321099421445 -6.78207395789754 24.999043611733676 0.922795951449933 0.8384450810252095 0.11870656960685955 0.08809267641626096 327.8237028736711 397161.68295875035 0.012906738230481466 0.024410610124587114 1.6516805024166436e-07 6.78207395789754 -0.08435087042472345 TSTPS(ph)PQPSKR ddPTM_A549_PD325901_60min_R1 2 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.008)S(0.032)T(0.146)PS(0.811)PQPS(0.002)KR;T(0.004)S(0.004)T(0.019)PS(0.972)PQPS(0.001)KR 47.288000000000004 0.023409 84544100.0 4674.660000000001 4899.889999999999 4901.07 4681.19 5577.349999999999 5377.0199999999995 4582.38 5361.42 5929.53 5686.7 5338.96 True False 5149.228041897194 5312.820926465452 5233.686082728103 4970.336474546142 5185.61617681296 5333.231331865296 4756.76497847455 5254.482272147373 5680.332474596021 5327.64079150171 4682.301766455923 1.099721525593745 1.1346600863119456 1.1177592440159039 1.061515622541397 1.107492945876062 1.1390191401315997 1.015903121099986 1.1222006897954675 1.2131495913591055 1.1378251674569557 1.0 12.193002201371764 -11.134615882556341 1.5178222504116556 1.0003427686087012 1.1242106585228169 0.0 0.06196045293844713 0.32614625166362915 1.3519008996528095 0.040030471434258065 0.008703562561907898 7.334729761167123e-12 11.134615882556341 0.12386788991411568 TSTS(ph)PPPEK ddPTM_A549_MK2206_60min_R1 2 TSTSPPPEK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 T(0.179)S(0.005)T(0.353)S(0.463)PPPEK;TST(0.079)S(0.921)PPPEK 127.51 5.1942e-05 274430000.0 17179.3 19233.5 15350.7 14890.2 22752.0 18473.1 15385.900000000001 17084.4 24835.0 22553.0 23019.0 True False 20078.74584644023 20212.402997079334 17527.66008674596 18538.29966844649 19405.210939392164 20427.911180548643 18181.318871684547 19506.166018780692 19209.912153345635 17458.26163626125 17302.747007919508 1.1604368853830054 1.168161505674681 1.0129986919836202 1.071407890317154 1.1215104127980575 1.1806166483968552 1.050776438178453 1.1273450400594005 1.1102232578765217 1.0089878577240112 1.0 14.078713479844566 -10.639695189787544 0.6538707420560304 0.989234230783123 1.1115496448862063 0.4185125821674044 0.048506219055499795 0.7528003935569203 0.4977007948969187 0.051835814752754485 0.010117414471578151 2.2924760659223497e-11 10.639695189787544 0.12231541410308333 TSTS(ph)PPPEK ddPTM_A549_PD325901_60min_R1 1 TSTSPPPEK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 T(0.009)S(0.001)T(0.241)S(0.749)PPPEK 107.45 0.00048492 208510000.0 5790.0 5766.6 5976.4 6152.8 7585.3 5767.2 5543.4 6098.5 6235.0 6887.5 6959.8 True False 6377.796537627283 6252.571619884458 6381.994443012695 6532.844481977346 7052.534695864404 5720.233835309063 5754.357120464873 5976.860633319304 5972.964632796558 6452.622074571893 6103.788721807233 1.044891431913607 1.0243754993592198 1.0455791859589614 1.0702933505278793 1.1554355855515692 0.9371611790677109 0.9427516879648976 0.9792050324359282 0.9785667402701417 1.0571502993736284 1.0 12.575489309862663 -7.283453784740354 24.98125468661737 0.9815314954060478 1.0645540808564178 0.49670324155187584 0.04285225217930197 469.14786878491606 532373.3364153989 0.00571365665513985 0.009138905247253467 5.2065041064220536e-08 7.283453784740354 0.08302258545037 TSTTGVATTQS(ph)PTPR ddPTM_A549_MK2206_60min_R1 1 TSTTGVATTQSPTPR 15 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 TSTTGVATTQS(0.954)PT(0.046)PR 170.99 3.1902e-27 46081000.0 2064.9 2184.6 2160.1 2325.2 2454.1 2191.9 2070.7 2277.4 3332.3 3158.2 2664.4 True False 2413.4046380419736 2295.7868088189607 2466.434661180271 2894.8741043821956 2093.1051409266124 2423.845403134534 2446.919386425051 2600.22842424499 2577.539370589636 2444.7604265348414 2002.7559463009125 1.2050418037702142 1.1463138147507568 1.2315203286430245 1.445445267422136 1.0451124335906103 1.2102550026683847 1.221776118525329 1.2983251549184556 1.2869962390326928 1.2206981240276982 1.0 10.967770911247817 -10.801576352675381 1.0114644386812457 0.9978787944647357 1.234220623891941 0.029397673520284107 0.11320889440456593 0.3918506300986639 0.7014958921535154 0.06700858560247967 0.01614865704636471 1.5791509551209702e-11 10.801576352675381 0.23634182942720539 TSTTGVATTQS(ph)PTPR ddPTM_A549_PD325901_60min_R1 2 TSTTGVATTQSPTPR 15 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 TSTTGVATT(0.001)QS(0.916)PT(0.083)PR;TSTTGVATT(0.002)QS(0.96)PT(0.038)PR 213.49 1.6049e-45 113797000.0 7250.700000000001 6779.6 7248.400000000001 7354.0 8464.099999999999 8685.3 7632.9 7972.2 8189.5 8278.6 8566.8 True False 7986.785726316777 7350.9406850082705 7740.320012170071 7808.239877854207 7869.61081555982 8614.56979640204 7923.374186383147 7813.18821693009 7845.323794753393 7755.887783165287 7513.137909419551 1.0630426091744427 0.9784115204104098 1.0302379785236861 1.0392781247985179 1.047446607587669 1.146600781226387 1.0546025218636363 1.0399367496148784 1.0442140007728815 1.0323100516285466 1.0 12.875199868946504 -4.474897145793664 15.66891936188576 1.0342799555327307 1.0921125220314556 0.0 0.04101209056978315 1247472.5054008416 0.017435699872612915 0.0058398284893791536 1277869.9584504454 3.3504477860575386e-05 4.474897145793664 0.057832566498724924 TSTTGVATTQSPT(ph)PR ddPTM_A549_MK2206_60min_R1 1 TSTTGVATTQSPTPR 15 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2 E9PMS6 LMO7 LIM domain only protein 7 1 TSTTGVATTQS(0.344)PT(0.655)PR 165.58 3.3013999999999997e-20 47917000.0 1484.4 1949.0 1964.2 2194.7 2431.0 1867.6 1563.0 1843.9 2547.6 2636.2 2862.4 True False 1734.9304299043547 2048.1957751479235 2242.7530954540466 2732.4015985238275 2073.403120326226 2065.2281923874534 1846.9768682002964 2105.278471706919 1970.5726676812303 2040.6805890795838 2151.5870817789128 0.8063491571393568 0.9519464921933319 1.0423715193529415 1.2699470180238777 0.9636621905221494 0.9598627031539627 0.8584253381337615 0.9784769993907445 0.9158693526138755 0.9484536351614304 1.0 11.071185516725292 -6.969360926651859 24.999044514718964 0.952727279015489 1.0274855137435468 0.08891453579828512 0.10737991414622336 397.9110493250783 324662.21467391157 0.015825966178812843 0.02990802827212955 1.0730972288340393e-07 6.969360926651859 0.07475823472805776 TSVATSTEGKDKDVT(ph)LSPVKAGPATTTSSETR ddPTM_A549_PD325901_60min_R1 1 TSVATSTEGKDKDVTLSPVKAGPATTTSSETR 32 3 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TSVAT(0.003)S(0.003)T(0.003)EGKDKDVT(0.494)LS(0.494)PVKAGPAT(0.001)T(0.001)T(0.001)S(0.001)S(0.001)ETR 65.315 0.00040389 2610800.0 493.69 415.38 503.93 561.29 645.77 780.75 1066.1 746.38 921.35 804.34 429.25 True False 543.8090453646306 450.3855303762368 538.1297201772617 595.959608517921 600.4133429855585 774.3918308568373 1106.6710188923048 731.4928653762175 882.6288635809321 753.553835130477 376.45497123994295 1.4445527006150767 1.1963861943243468 1.4294663672651338 1.5830833806098719 1.5949141035592014 2.057063633151651 2.9397168411595778 1.9431085289347456 2.344580178271485 2.001710410805495 1.0 8.55633350047841 -6.5590812143901465 1.8602643072126352 1.8058162272523688 1.3359338462799146 0.21568391849430313 0.4681268114105794 0.6975072456280668 4.793405618252547 0.09382489555448315 0.2527118728107688 2.7600616680236775e-07 6.5590812143901465 -0.46988238097245416 TSVATSTEGKDKDVTLS(ph)PVK ddPTM_A549_MK2206_60min_R1 4 TSVATSTEGKDKDVTLSPVK 20 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TSVATSTEGKDKDVT(0.005)LS(0.995)PVK;TSVATSTEGKDKDVT(0.016)LS(0.984)PVK;TSVATSTEGKDKDVT(0.002)LS(0.998)PVK;TSVATSTEGKDKDVT(0.001)LS(0.999)PVK 172.61 6.407099999999999e-35 330625500.0 10976.300000000001 12349.5 11291.1 11890.500000000002 15625.4 13423.800000000001 11126.5 12625.3 17318.0 17375.5 17882.1 True False 12828.831095229845 12978.03680102067 12892.347762998268 14803.673033784822 13326.924358842221 14844.297606002729 13148.041026251189 14414.974938359659 13395.500651163266 13450.362482191164 13441.481049147105 0.9544209487275114 0.9655213405106245 0.9591463705419813 1.1013424026457375 0.9914773759018056 1.1043647312172222 0.9781690706684041 1.072424600061042 0.9965792163961904 1.000660748098486 1.0 13.714404489730057 TSVATSTEGKDKDVTLS(ph)PVK ddPTM_A549_PD325901_60min_R1 8 TSVATSTEGKDKDVTLSPVK 20 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TSVATSTEGKDKDVTLS(1)PVK;TSVATSTEGKDKDVTLS(1)PVK;TSVATSTEGKDKDVT(0.051)LS(0.948)PVK;TSVATSTEGKDKDVT(0.001)LS(0.999)PVK;TSVATSTEGKDKDVT(0.022)LS(0.978)PVK;TSVATSTEGKDKDVT(0.033)LS(0.967)PVK;TSVATSTEGKDKDVT(0.006)LS(0.994)PVK;TSVATSTEGKDKDVT(0.017)LS(0.983)PVK 174.28 5.1165e-35 607254600.0 35321.9 34112.4 35631.200000000004 35655.2 42108.30000000001 38306.6 36761.600000000006 39857.3 40547.600000000006 38336.3 42060.3 True False 38907.75328539156 36987.17166547821 38049.34749981161 37857.54072516553 39150.758273748856 37994.64375011274 38160.58280471941 39062.31488405301 38843.525380077255 35915.7394754861 36887.149742209345 1.054777979792515 1.0027115655172025 1.0315068463062187 1.0263070199171767 1.0613657750018375 1.0300238434154783 1.0345224033683713 1.0589681001932947 1.0530367797875493 0.9736653475936181 1.0 15.170830696322918 -4.925262357301751 13.27040321081689 1.0301673481488152 1.2961834086265585 0.07715444154131301 0.025615841621244407 218644.18755666248 998691.3995263961 0.0032396439072619305 1571386.843898592 1.1877844700475545e-05 4.925262357301751 0.2660160604777433 TSVATSTEGKDKDVTLS(ph)PVKAGPATTTSSETR ddPTM_A549_MK2206_60min_R1 2 TSVATSTEGKDKDVTLSPVKAGPATTTSSETR 32 3 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TSVATSTEGKDKDVT(0.002)LS(0.998)PVKAGPATTTSSETR;TSVAT(0.001)S(0.001)T(0.001)EGKDKDVT(0.007)LS(0.99)PVKAGPATTTSSETR 93.56299999999999 6.2566e-10 51048000.0 2782.6000000000004 3812.1000000000004 3676.6000000000004 3025.7 3571.5 3401.6 3269.2 3598.1 5505.7 5357.2 4985.799999999999 True False 3252.2348519616426 4006.119607204413 4197.997164619871 3766.996635828834 3046.1370811374413 3761.5550542006636 3863.171322789773 4108.14169371911 4258.667740796256 4147.00479926301 3747.6882589202432 0.867797593415268 1.0689575360674817 1.120156447011782 1.0051520765801778 0.8128042864523295 1.0037000930500062 1.0308144797248429 1.096180207609562 1.1363452471426299 1.106550095086568 1.0 11.87178523605439 -7.893434240952374 3.2714749288201164 1.0683559913264744 0.983664009270223 0.23836731217339246 0.08578473949573662 0.3719831695948306 7.9420136059397235 0.015092225381949053 0.021317622786665314 1.2781027198650408e-08 7.893434240952374 -0.08469198205625139 TSVATSTEGKDKDVTLS(ph)PVKAGPATTTSSETR ddPTM_A549_PD325901_60min_R1 2 TSVATSTEGKDKDVTLSPVKAGPATTTSSETR 32 3 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 T(0.009)S(0.009)VAT(0.009)S(0.009)T(0.009)EGKDKDVT(0.03)LS(0.71)PVKAGPAT(0.041)T(0.041)T(0.041)S(0.041)S(0.041)ET(0.01)R;TSVATSTEGKDKDVT(0.003)LS(0.997)PVKAGPATTTSSETR 117.93 7.703800000000001e-22 74145000.0 2278.58 2992.6000000000004 3678.2 2959.21 3264.6000000000004 5386.5 4388.6 4392.0 3555.1 4096.8 3217.1000000000004 True False 2509.8997641980595 3244.7969045306154 3927.8247708134145 3141.993680846474 3035.305758258595 5342.634129888385 4555.610574534067 4304.398114542654 3405.6915101932723 3838.1273488357383 2821.417094877157 0.8895883450749912 1.1500592770995073 1.3921460878454164 1.1136225432784779 1.075808948549222 1.8935995459831154 1.6146533537369157 1.5256156639718896 1.207085445245576 1.3603544671947372 1.0 11.462204242407793 -9.502756518306626 1.4392859378288199 1.05294422321781 1.3350834583962905 0.0 0.28419361683910793 0.4982579344780482 2.1111116913830728 0.0685391651186225 0.054264278383169745 3.142269873891679e-10 9.502756518306626 0.2821392351784806 TSVESVGT(ph)MR ddPTM_A549_MK2206_60min_R1 4 TSVESVGTMR 10 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 TSVES(0.004)VGT(0.996)MR;T(0.001)S(0.001)VES(0.004)VGT(0.995)MR;TSVESVGT(1)MR;TSVESVGT(1)MR 86.95299999999999 2.1905e-05 37835400.0 4436.1900000000005 5427.83 5286.7 5689.370000000001 6554.48 5840.68 4210.92 6310.26 7934.89 8113.7 8338.77 True False 5184.910417567637 5704.0833628636055 6036.433555512118 7083.265905405526 5590.324674667156 6458.736880870392 4975.989656968649 7204.758679360761 6137.650084415568 6280.809534790622 6268.023270655932 0.8272002501715424 0.9100290660322785 0.9630521928295939 1.1300637536823122 0.8918800127687055 1.030426436211125 0.7938690464446736 1.149446702454058 0.9792002708651845 1.0020399196975782 1.0 12.61379482063046 -5.542182452986016 2.3511184403984156 0.9918672813530225 0.8277309499019642 0.23366409778588892 0.09318441445127164 0.362932672568187 3.408848469573027 0.011527388806631 0.09443968470871411 2.869574781576929e-06 5.542182452986016 -0.16413633145105833 TSVESVGT(ph)MR ddPTM_A549_PD325901_60min_R1 3 TSVESVGTMR 10 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 TSVES(0.001)VGT(0.999)MR;TSVES(0.002)VGT(0.998)MR;TSVES(0.001)VGT(0.999)MR 74.127 0.0007732 7979600.0 1051.8 996.3800000000001 1290.17 1251.75 1206.28 1187.48 924.24 1296.77 1279.83 1330.82 1048.27 True False 1158.5779617057635 1080.3484393959143 1377.7286946224629 1329.067754569487 1121.5550542400847 1177.8095565877386 959.4124589635343 1270.9049050536146 1226.043195828712 1246.7917980808377 919.3394355310304 1.2602287217631905 1.1751355349745023 1.4986071970541075 1.4456768666752435 1.2199575161183531 1.2811476491350664 1.0435889312301248 1.3824109528375799 1.3336131883872933 1.3561822215976884 1.0 9.844453816841924 -10.789754332734974 0.7802720637987786 0.9761760186168383 1.2964384008137857 0.0 0.15943158186566744 0.5986784962835272 0.567251180173902 0.12307677021447526 0.02321222361135557 1.6227277658478083e-11 10.789754332734974 0.32026238219694736 TSVLGGGEDGIEPVS(ph)PPEGMTEPGHSR ddPTM_A549_MK2206_60min_R1 5 TSVLGGGEDGIEPVSPPEGMTEPGHSR 27 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(0.98)PPEGMT(0.018)EPGHS(0.002)R;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR 157.01 1.8623e-41 100573800.0 9365.8 10250.9 8521.7 7812.1 11923.4 9762.3 9054.199999999999 9688.900000000001 14446.099999999999 13651.0 13468.3 True False 10946.518068174495 10772.627024866015 9730.205199842556 9726.064850698496 10169.48365483247 10795.340106309715 10699.230940536872 11062.331246011816 11174.081415681352 10567.229618968744 10123.749403829972 1.0812711409108227 1.064094595307798 0.9611266351734732 0.9607176612865362 1.0045175210466188 1.0663381397237737 1.0568447038494637 1.0927108924512459 1.1037493096632778 1.0438059257937575 1.0 13.305456081094652 -7.258104786061394 24.539196502917765 1.055515091339829 1.011173418411202 0.22073310547624325 0.042487549791022386 366.6704288501654 2698305.416914474 0.007885775636465843 0.01330632744816648 5.5194425075447876e-08 7.258104786061394 -0.04434167292862701 TSVLGGGEDGIEPVS(ph)PPEGMTEPGHSR ddPTM_A549_PD325901_60min_R1 4 TSVLGGGEDGIEPVSPPEGMTEPGHSR 27 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR 119.33 4.2076999999999996e-18 181808000.0 11273.6 11477.0 12616.3 13605.2 14713.9 14166.199999999999 12375.6 13480.0 14117.1 13283.6 15758.300000000001 True False 12418.087572814324 12444.207068535008 13472.517985975011 14445.562304348943 13680.446424199341 14050.835163988644 12846.560230188168 13211.130825144572 13523.807380537659 12444.87122900664 13820.129000094092 0.8985507713227407 0.900440731663958 0.9748474841214063 1.0452552435835145 0.9898928167824049 1.0166934884539054 0.9295542921560793 0.9559339731962434 0.9785586936594864 0.9004887891366218 1.0 13.7544834617682 -5.791181882927038 4.736681171026776 0.9884610772862695 0.8981054453689408 0.34462451552894025 0.03879901561595156 0.09216847705756084 4.88318966709289 0.003993915113333682 0.01416629700072582 1.6174025261215082e-06 5.791181882927038 -0.09035563191732876 TSVPS(ph)PEHLVKPLR ddPTM_A549_MK2206_60min_R1 1 TSVPSPEHLVKPLR 14 1 Q8TEH3-7;Q8TEH3-6 Q8TEH3-7 DENND1A DENN domain-containing protein 1A 1 T(0.001)S(0.001)VPS(0.997)PEHLVKPLR 63.13399999999999 0.0024262 2475100.0 422.19 292.46 201.84 476.76 516.97 423.46 430.4 358.26 554.91 539.66 720.11 True False 493.445350445513 307.3449648023408 230.4639470453338 593.5662214025699 440.9243978260178 468.2702561300017 508.5981088121611 409.044452125235 429.2237710091814 417.7504311898523 541.2868129750603 0.911615318565406 0.5678042720329521 0.4257704816022414 1.096583561938573 0.8145855159533201 0.8651056055776795 0.9396092729781589 0.7556889292702603 0.7929691999146444 0.7717727851040407 1.0 9.080249430797485 -14.999999999988223 0.060627994764676695 1.735096333625485 0.4700342021985186 0.02555735260530645 0.17840985426470343 329.84002840305686 1.5111175091535334 36.92811126041763 6.438688157453954 1.0000000000271182e-15 14.999999999988223 -1.2650621314269663 TSVPS(ph)PEQPQPYR ddPTM_A549_PD325901_60min_R1 2 TSVPSPEQPQPYR 13 0 Q8TEH3 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 T(0.001)SVPS(0.999)PEQPQPYR;T(0.001)SVPS(0.999)PEQPQPYR 161.21 1.303e-35 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TSVSQNVIPSS(ph)AQK ddPTM_A549_MK2206_60min_R1 4 TSVSQNVIPSSAQK 14 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 TSVSQNVIPS(0.427)S(0.573)AQK;TSVSQNVIPS(0.095)S(0.905)AQK;TSVSQNVIPS(0.104)S(0.896)AQK;TSVSQNVIPS(0.026)S(0.974)AQK 267.47 1.2878999999999999e-83 53937400.0 11694.699999999999 12615.3 12891.2 11917.5 16930.5 11964.4 12500.5 12442.699999999999 19219.4 17988.100000000002 18257.4 True False 13668.47945203616 13257.364885697081 14719.36600352164 14837.288034996904 14440.045877697727 13230.464866674052 14771.679040907118 14206.490829170607 14866.236587075131 13924.575716721987 13723.583701394047 0.9959847041008472 0.9660279103591864 1.0725599321426837 1.0811525879708612 1.0522066387244682 0.9640677795647573 1.0763718400614706 1.0351881212869716 1.0832619897647444 1.0146457382926533 1.0 13.74436964773023 -5.752770054234817 24.99911295875344 1.0425390584442893 0.9810062901006282 0.29622464506244073 0.03635285539373588 192.21664294975216 554269.2303322444 0.005498857668230717 0.020641425266874427 1.7669731317731548e-06 5.752770054234817 -0.06153276834366106 TSVSQNVIPSS(ph)AQK ddPTM_A549_PD325901_60min_R1 2 TSVSQNVIPSSAQK 14 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 TSVSQNVIPS(0.428)S(0.572)AQK;TSVSQNVIPS(0.391)S(0.609)AQK 312.49 3.663499999999999e-136 79257000.0 16162.3 18243.8 18174.9 17525.0 20647.5 19360.8 18288.1 19078.5 20668.5 19862.9 21435.6 True False 17803.08479794359 19781.269052621672 19408.358008552204 18607.479447837246 19197.29083000808 19203.132063852783 18984.063653132314 18697.964350706286 19799.874821644855 18608.753104176278 18799.157091463996 0.9470150555860462 1.052242340248522 1.0324057570307141 0.989803923511348 1.0211782760581785 1.0214889939172973 1.009835896405817 0.9946171660641286 1.0532320531879191 0.9898716742265974 1.0 14.198380355961564 TT(ph)DEELS(ph)ELEDR ddPTM_A549_PD325901_60min_R1 1 TTDEELSELEDR 12 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 2 T(0.474)T(0.528)DEELS(0.998)ELEDR 40.577 0.043648 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TT(ph)DEELSELEDR ddPTM_A549_MK2206_60min_R1 2 TTDEELSELEDR 12 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 T(0.123)T(0.877)DEELSELEDR;T(0.117)T(0.883)DEELSELEDR 126.76 9.354000000000001e-07 18598300.0 492.09000000000003 517.84 379.2 255.72 534.28 660.6700000000001 646.66 854.74 793.89 645.3299999999999 516.8399999999999 True False 575.1427615545907 544.1958441265274 432.9762619876664 318.37141147970686 455.6881197564363 730.5816608827471 764.1497514973792 975.9020125314676 614.0751825818222 499.54950479885025 388.4943639416616 1.4804404257482542 1.4007818250054376 1.1144981811182322 0.8195007213219577 1.172959409585836 1.8805463571472947 1.9669519622995817 2.512010734544438 1.5806540315061945 1.2858603654643115 1.0 8.601749858749034 TT(ph)DEELSELEDR ddPTM_A549_PD325901_60min_R1 2 TTDEELSELEDR 12 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 T(0.092)T(0.908)DEELSELEDR;T(0.153)T(0.847)DEELSELEDR 114.82 2.9395999999999998e-05 20557500.0 388.64 574.97 450.83000000000004 454.28 544.25 304.85 592.46 353.77 551.55 566.78 621.35 True False 428.09444669835364 623.4247397573903 481.42603486102246 482.33984385526395 506.02375756057137 302.36740267269545 615.0063895065515 346.7137798228037 528.370271566791 530.99341407272 544.9278890621746 0.7855983429938 1.144049978484877 0.8834674174771283 0.8851443531095001 0.9286068261828964 0.5548759913776339 1.128601420208062 0.6362562584555931 0.9696150301209956 0.9744287725602815 1.0 9.089921518791689 -8.969985265008557 24.99170577573287 0.9865950656526978 0.8740756141068615 0.08295468828810537 0.16718424865543974 324.5900324376786 270271.3567365426 0.026761059642100248 0.028169575029347745 1.0715556609738663e-09 8.969985265008557 -0.11251945154583631 TT(ph)EGEEETESR ddPTM_A549_PD325901_60min_R1 1 TTEGEEETESR 11 0 Q8WXH0;Q8WXH0-2;A0A0C4DGK3;Q8WXH0-7;Q8WXH0-10;Q8WXH0-4;Q8WXH0-3;Q8WXH0-13;Q8WXH0-6;Q8WXH0-11;Q8WXH0-12;Q8WXH0-5 Q8WXH0 SYNE2 Nesprin-2 1 T(0.162)T(0.838)EGEEETESR 67.385 0.0049282 1385700.0 213.08 192.71 184.5 320.16 257.43 197.67 173.96 223.44 257.45 300.98 147.27 True False 234.7117247387947 208.95034801580383 197.02127948862895 339.935556063884 239.34900488528774 196.06024105727965 180.58014299456462 218.98331391471098 246.63027180649135 281.976071434432 129.1567236214476 1.8172629202543409 1.617804649707805 1.5254434609698617 2.631961747963036 1.8531672078242603 1.5180025906504346 1.3981474439057209 1.6954852041349466 1.9095426462609355 2.18320861297853 1.0 7.012978938788755 -7.2716574782562775 4.890932452213113 1.4633017015365002 1.89719042185307 0.03403615602756527 0.39936514486236185 0.25006501670613873 17.716065004464248 0.06333837501660022 0.10595781959196597 5.349861288351112e-08 7.2716574782562775 0.4338887203165698 TT(ph)NNEKSPIIKPLIPK ddPTM_A549_PD325901_60min_R1 1 TTNNEKSPIIKPLIPK 16 2 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 T(0.335)T(0.441)NNEKS(0.224)PIIKPLIPK 101.13 4.3e-07 25827000.0 3361.2 3535.2 3536.4 3996.1 4287.2 2948.3 3789.4 3922.8 3432.6 3748.6 3885.9 True False 3702.4265496153394 3833.123710785478 3776.401370100743 4242.930021198426 3986.081862037079 2924.290022305748 3933.607690639245 3844.5566766229317 3288.339759188045 3511.9127562599224 3407.9589347496644 1.0864058577300038 1.1247564258185654 1.1081123459541167 1.2450062053080742 1.169639053273945 0.8580766606333992 1.1542415169765514 1.1281112097394854 0.9649000537119423 1.0305032494524158 1.0 11.734692236132542 -8.009104900384374 0.6591294955965192 0.9834312782278758 1.1373037895354843 0.1747077361795767 0.093796214526011 0.6382844513649153 0.5689895341712702 0.022155622034588682 0.03618126395870928 9.792534259492718e-09 8.009104900384374 0.15387251130760848 TT(ph)PASGER ddPTM_A549_MK2206_60min_R1 1 TTPASGER 8 0 P12270 P12270 TPR Nucleoprotein TPR 1 T(0.191)T(0.809)PASGER 45.022 0.056937 3783400.0 1318.3 1068.6 1198.1 935.13 1215.5 1080.7 877.9 990.83 1314.8 1969.2 2655.5 True False 1540.7968106594672 1122.9871756403652 1368.0085956946812 1164.2368919795806 1036.701560163113 1195.0589566893993 1037.4030662783368 1131.2831867896134 1016.9998993041604 1524.356352331203 1996.0660619284174 0.7719167416587853 0.5626002050029533 0.6853523647273656 0.583265711584115 0.5193723694503108 0.5987071167047658 0.5197238137880529 0.5667563856562295 0.5095021245547493 0.763680311691943 1.0 10.96294375365357 -10.76874208773351 0.9390248546103608 1.0085660366251066 0.584359427409495 0.5160747390695146 0.09982877925060311 0.19572432205400203 0.29642815702559716 0.05759861565322432 0.013475209356868358 1.7031696608698953e-11 10.76874208773351 -0.4242066092156116 TT(ph)PDKAPK ddPTM_A549_MK2206_60min_R1 2 TTPDKAPK 8 1 A0A087X085;A0A0C4DFT8;G3XAA4;Q9NQC1-2;Q9NQC1 A0A087X085 JADE2 Protein Jade-2 1 T(0.112)T(0.888)PDKAPK;T(0.173)T(0.827)PDKAPK 50.284 0.012521 26364200.0 10554.8 10496.3 9402.7 6156.6 10203.9 8769.0 8046.299999999999 9103.5 12111.099999999999 14688.0 15775.7 True False 12336.192199915451 11030.516836677865 10736.14424734027 7664.967276380276 8702.919827024596 9696.9297596089 9508.208557005795 10393.949003299502 9367.955187452559 11369.970598740965 11858.158302829654 1.0403126594263568 0.930204889746303 0.905380411794499 0.6463876666709049 0.7339183374662709 0.8177433216838546 0.8018284386317307 0.8765230432806117 0.7900008541138408 0.9588310687358429 1.0 13.533592341061153 -10.836280889894281 0.9746200431609102 1.0045520565169823 0.8307209950354175 0.2254959165204904 0.09949085715219023 0.6556147779770509 1.056841075801552 0.08246308258365188 0.018218133134698358 1.457871043826257e-11 10.836280889894281 -0.1738310614815648 TT(ph)PDKAPK ddPTM_A549_PD325901_60min_R1 1 TTPDKAPK 8 1 A0A087X085;A0A0C4DFT8;G3XAA4;Q9NQC1-2;Q9NQC1 A0A087X085 JADE2 Protein Jade-2 1 T(0.147)T(0.853)PDKAPK 47.559 0.014772 48767000.0 9722.2 9613.9 9784.5 7993.6 8570.4 7966.6 6933.9 7418.0 9386.7 9659.4 12038.0 True False 10709.19058689464 10424.09709298498 10448.535008978271 8487.346517217222 7968.444670274908 7901.722650917812 7197.773358875667 7270.04217069158 8992.209642128539 9049.503835516483 10557.40231516932 1.0143774261124088 0.9873732933344027 0.9896880593406369 0.8039237554698702 0.7547732323154448 0.7484533046130376 0.6817750374572354 0.6886203588401361 0.8517445270801278 0.8571714485592516 1.0 13.365967277877603 -6.237740568020772 18.896882406490732 0.8613868537380085 0.9961699471833064 0.33241376172319814 0.09968422353177384 52.72258438073432 42035.98097635005 0.018731967910757447 0.04944964514091778 5.784414844588272e-07 6.237740568020772 0.13478309344529793 TT(ph)PDQELVPASEPVWERPWSVEEIR ddPTM_A549_MK2206_60min_R1 2 TTPDQELVPASEPVWERPWSVEEIR 25 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;Q9Y4E1-5;A0A0A0MT65 J3KP36 FAM21C WASH complex subunit FAM21C 1 T(0.325)T(0.675)PDQELVPASEPVWERPWSVEEIR;T(0.139)T(0.861)PDQELVPASEPVWERPWSVEEIR 205.32 7.036599999999999e-69 30521000.0 8547.5 9423.4 7387.5 7288.6 13038.3 10961.3 9537.099999999999 11803.900000000001 14465.6 12176.099999999999 13045.1 True False 9990.10903368868 9903.010809404283 8435.158585004972 9074.307327197685 11120.383341731565 12121.217490477928 11269.86761977802 13477.138972927658 11189.164696816455 9425.51055333129 9805.641643555782 1.018812373207023 1.0099299127367654 0.8602352494238371 0.925416985145615 1.1340801291713352 1.2361473048980869 1.149324850881586 1.3744270352552366 1.1410945967181982 0.9612334303003709 1.0 13.25939632259489 -6.762813571145103 24.998900581719283 1.1150296190884423 0.9509534647549445 0.38229330563782193 0.11201665348116956 36.74222923835119 668426.0652356239 0.017737456402169536 0.03486990184380754 1.7265788985258822e-07 6.762813571145103 -0.16407615433349787 TT(ph)PNSGDVQVTEDAVR ddPTM_A549_MK2206_60min_R1 2 TTPNSGDVQVTEDAVR 16 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.104)T(0.894)PNS(0.002)GDVQVTEDAVR;T(0.142)T(0.858)PNSGDVQVTEDAVR 128.9 5.619e-10 10747200.0 1879.6399999999999 2034.56 1659.4 1322.83 2478.1 2139.37 1823.46 2010.65 2720.5 2274.6 2197.77 True False 2196.8772792141094 2138.1104136916165 1894.7278722107965 1646.9234093840948 2113.5747727192193 2365.756713401128 2154.7590787514496 2295.665794857378 2104.3110937457946 1760.7662802216923 1652.0030536337486 1.3298264033966853 1.2942533060024468 1.1469275846937148 0.9969251604962348 1.2794012505426045 1.4320534748391691 1.3043311717928354 1.3896256364707242 1.2737937070498437 1.0658371825334754 1.0 10.690000638161694 -10.526571519101367 0.9000920689653642 1.0045873440919844 1.268258584795803 0.39476489277548865 0.11281915639052867 0.4540904607803359 0.6757771372111034 0.07443785627239337 0.022591315755777257 2.974599365040906e-11 10.526571519101367 0.26367124070381864 TT(ph)PNSGDVQVTEDAVR ddPTM_A549_PD325901_60min_R1 2 TTPNSGDVQVTEDAVR 16 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.121)T(0.879)PNSGDVQVTEDAVR;T(0.118)T(0.882)PNSGDVQVTEDAVR 191.96 1.1617999999999999e-34 10388700.0 2636.5 2844.0 2617.2 2619.1 2734.5 2027.98 2360.3 2159.4 2418.2 2325.8 2862.0 True False 2904.155539111283 3083.67386101887 2794.818930502113 2780.8758585923256 2542.438153512874 2011.4648032546254 2450.1225081057196 2116.3290729834716 2316.5714635170234 2178.9485910764897 2509.9921437127914 1.1570377008493116 1.228559168499024 1.1134771626687263 1.107922136552524 1.0129267375921298 0.8013829080274562 0.9761474808767678 0.8431616323121188 0.9229397268512326 0.8681097255760248 1.0 11.293467133202942 -6.706677621951511 2.1933746494306656 0.9428574827371018 1.1698260308732082 0.7449658801577872 0.06627499238940042 0.13107835189307548 1.2821434571473018 0.009916393137912437 0.023076951965011975 1.9648182258941716e-07 6.706677621951511 0.22696854813610645 TT(ph)PTMSEEPPLDLTGK ddPTM_A549_MK2206_60min_R1 2 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.404)T(0.535)PT(0.06)MS(0.001)EEPPLDLTGK;T(0.354)T(0.565)PT(0.081)MSEEPPLDLTGK 186.05 4.0622999999999995e-34 169920000.0 8010.400000000001 8936.1 8540.9 7527.8 12587.3 9911.099999999999 9489.900000000001 9387.1 14079.0 11389.4 12842.9 True False 9362.359684522937 9390.909320830868 9752.128048550798 9372.111337935783 10735.724844295488 10959.88602354427 11214.091990744728 10717.750171788079 10890.128979543108 8816.52662971816 9653.653483991888 0.9698255380771655 0.9727829299449463 1.010200756089102 0.970835689666822 1.1120893102386509 1.1353096567758967 1.1616422745378656 1.1102273548103547 1.1280836833020367 0.913283933832731 1.0 13.236859327117008 -6.754957675251932 24.9861357568436 1.0821248350276298 0.9824227270812829 0.3362036666919893 0.06698760088208898 129.86371230965662 500602.78615816834 0.00888724126640129 0.018159891455127617 1.7580949430979216e-07 6.754957675251932 -0.09970210794634693 TT(ph)PTMSEEPPLDLTGK ddPTM_A549_PD325901_60min_R1 2 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.112)T(0.877)PT(0.011)MSEEPPLDLTGK;T(0.412)T(0.588)PTMSEEPPLDLTGK 186.68 3.7557e-34 291273000.0 14179.1 14425.4 15516.1 14599.0 16883.5 15466.6 14245.9 16081.4 14051.3 16062.4 17451.3 True False 15618.551793898274 15641.0790839457 16569.115851888982 15500.747073265391 15697.661204913002 15340.645137534895 14788.035520155603 15760.643861385748 13460.772725712 15048.217322773664 15304.900732905331 1.0204935050848516 1.021965405519919 1.0826019809632352 1.0127963156232038 1.0256623991793192 1.0023354875182375 0.9662287771890951 1.0297775945387595 0.8795073526201657 0.983228678538254 1.0 13.901706067170993 -7.790219836880599 1.1166390179046115 0.9468487828443237 1.0358697213664407 0.3070630948549473 0.039941785285152055 0.3726407131055593 0.9385257082389279 0.00894660702699466 0.014683125079612091 1.620989355983303e-08 7.790219836880599 0.08902093852211701 TT(ph)PTQPSEQK ddPTM_A549_MK2206_60min_R1 2 TTPTQPSEQK 10 0 O95104-2;O95104-3;O95104 O95104-2 SCAF4 Splicing factor, arginine/serine-rich 15 1 T(0.079)T(0.92)PT(0.001)QPSEQK;T(0.149)T(0.849)PT(0.002)QPSEQK 160.67 9.7278e-09 69989000.0 5886.2 5562.700000000001 5803.1 4727.4 8830.8 5970.6 5872.0 5644.0 7764.1 8484.6 9124.8 True False 6879.646656226773 5845.81766978726 6626.066840560725 5885.613212221052 7531.801018090021 6602.404929036477 6938.866391600864 6444.054284025087 6005.543746719983 6567.922967189381 6858.860328331548 1.0030305804317612 0.8523016055072934 0.9660594506044634 0.8581036689010341 1.0981126101925114 0.9626096192343 1.0116646293173281 0.939522599316822 0.8755891590200761 0.9575822589737821 1.0 12.743753162043092 -11.279116277689603 1.8196666644566264 1.0001376060112688 0.9393216015156663 0.0 0.07108309721770513 0.7519573251030965 4.495748900618972 0.05309302938757073 0.010613581861645072 5.258764497612208e-12 11.279116277689603 -0.06081600449560243 TT(ph)PTQPSEQK ddPTM_A549_PD325901_60min_R1 1 TTPTQPSEQK 10 0 O95104-2;O95104-3;O95104 O95104-2 SCAF4 Splicing factor, arginine/serine-rich 15 1 T(0.332)T(0.668)PT(0.001)QPSEQK 193.3 5.3923000000000005e-15 48593000.0 5301.5 6396.9 5339.9 5846.5 6623.7 4704.6 5479.3 6417.9 4845.2 5561.2 6301.8 True False 5839.704377241975 6935.989212922505 5702.297725427264 6207.625026635116 6158.474162524495 4666.287297405162 5687.817759888009 6289.889949754852 4641.573093636871 5210.0648829196725 5526.7185504015615 1.0566314032433717 1.254992297810886 1.0317691544131453 1.1232026690022203 1.1143093512654143 0.8443142625864524 1.029149161119258 1.1380876178863568 0.8398424944761521 0.9427049406272223 1.0 12.432207429459728 -7.058263931161109 0.8629421863059655 0.9388967519848603 1.144280479284925 0.28752278157359024 0.10109409081694838 0.5027618284419523 0.7205462075861074 0.01868337807521292 0.053774317248896426 8.744521881705712e-08 7.058263931161109 0.2053837273000647 TT(ph)SFKGTSPSSK ddPTM_A549_PD325901_60min_R1 1 TTSFKGTSPSSK 12 1 F8W8I7;F5H6V0;F5H497;F5GWA4;Q9H3F6-2;Q9H3F6 F8W8I7 KCTD10 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 1 T(0.111)T(0.487)S(0.377)FKGT(0.019)S(0.004)PS(0.001)S(0.001)K 43.023999999999994 0.030324 43987000.0 3094.7 3185.3 3594.9 3046.9 3917.0 3762.9 2881.0 3715.1 3469.8 3264.5 3577.6 True False 3408.8716658022704 3453.7364098113244 3838.871531889825 3235.1000929880324 3641.8834329164138 3732.2561899855186 2990.638031543691 3640.99941606043 3323.9763725545295 3058.378912876946 3137.577880274942 1.0864659925201778 1.1007651575834918 1.2235143407989062 1.0310820054304262 1.1607308477701532 1.18953419880002 0.9531677445665907 1.160449096403425 1.0594084033583426 0.9747579277965027 1.0 11.615435554432102 -9.238310986370058 0.42373019561058795 0.996341307279533 1.1286756784590737 0.30925524503031976 0.07180596464379599 0.8950975761629767 0.3967338107569609 0.04421961134014313 0.0273667843097598 5.776822368545454e-10 9.238310986370058 0.13233437117954072 TT(ph)SPLEEEEREIK ddPTM_A549_MK2206_60min_R1 2 TTSPLEEEEREIK 13 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.105)T(0.478)S(0.417)PLEEEEREIK;T(0.067)T(0.506)S(0.427)PLEEEEREIK 67.275 0.017157 66589100.0 3035.1 3140.6000000000004 3075.66 2043.16 3943.0 3111.7999999999997 2636.8599999999997 2371.33 4739.8 4674.5 5586.8 True False 3547.3506789293374 3300.4431254128144 3511.834836352812 2543.7342917209367 3362.989923260515 3441.088610554337 3115.9433299313087 2707.473289393551 3666.242867905282 3618.5272034187537 4199.44337216407 0.844719255519168 0.7859239506096781 0.8362619816785583 0.6057312996722448 0.8008180192527489 0.8194154095191584 0.7419896052379893 0.6447219427555533 0.8730306716854197 0.8616682933276567 1.0 12.03598239887798 -9.351638645216095 1.3232537681174565 0.9668223121305657 0.7625086728066369 0.35938140792679496 0.08297715025013697 0.19932757994775785 0.7232929118471694 0.01843179282867354 0.015351027683902545 4.450013769303392e-10 9.351638645216095 -0.20431363932392876 TT(ph)SPSS(ph)DTDLLDR ddPTM_A549_PD325901_60min_R1 1 TTSPSSDTDLLDR 13 0 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7ENU0;K7ERZ4;K7EJ43 Q96QT6 PHF12 PHD finger protein 12 2 T(0.295)T(0.354)S(0.354)PS(0.174)S(0.802)DT(0.02)DLLDR 61.211999999999996 0.011744 2868000.0 290.44 400.5 573.62 407.87 584.42 521.35 321.22 430.1 260.04 425.1 385.78 True False 319.92525498937255 434.2515405548724 612.5493026572753 433.06320356002146 543.3723553395479 517.1042984530416 333.4442028783288 421.5213180930774 249.11142311345895 398.25911345198006 338.3315056609087 0.9455969947712061 1.2835090238096216 1.8105003300260196 1.279996678742822 1.6060353418110003 1.5283953453962609 0.9855546920673767 1.2458825472657735 0.7362938979827962 1.1771268911950918 1.0 8.40229371790981 -8.135784271530527 1.5836565105382032 0.8847880643419755 1.418175806633221 0.2834166463588641 0.2568470202414889 0.23588019452669073 1.163755915306855 0.042662578256820544 0.0578775993778839 7.3150235472621775e-09 8.135784271530527 0.5333877422912455 TT(ph)T(ph)T(ph)KAPS(ph)VKPK ddPTM_A549_PD325901_60min_R1 1 TTTTKAPSVKPK 12 2 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 4 T(0.732)T(0.757)T(0.757)T(0.757)KAPS(0.996)VKPK 45.434 0.0082645 24456000.0 6287.8 5603.3 5652.5 6661.3 6892.4 5495.3 5840.8 6307.0 6479.6 6040.7 7594.7 True False 6926.13282716629 6075.5097557830595 6036.112641243769 7072.753372090056 6408.301601489168 5450.548098760907 6063.074840208399 6181.201937254219 6207.28494541597 5659.289171087686 6660.600046769931 1.0398661950172385 0.912156519400889 0.906241569657225 1.0618793085346716 0.9621207633682921 0.8183268865399236 0.9102895831658135 0.9280247866334209 0.9319408014036517 0.8496665662776385 1.0 12.701436438760995 -4.070000743684732 15.742492860877775 0.9542748630331866 0.9500064093823111 0.0 0.072416359889213 0.0 0.0 0.008671283084781503 0.0 8.511365807170799e-05 4.070000743684732 -0.004268453650875581 TTAGS(ph)VDWTDQLGLR ddPTM_A549_MK2206_60min_R1 2 TTAGSVDWTDQLGLR 15 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 TT(0.001)AGS(0.995)VDWT(0.004)DQLGLR;TTAGS(1)VDWTDQLGLR 146.0 1.2129e-13 5843300.0 2323.3599999999997 2272.66 1806.49 2163.24 3732.3999999999996 2663.2 2759.6000000000004 2830.5 3869.1 3597.8999999999996 3419.1 True False 2715.486367301659 2388.32868668429 2062.6774459865496 2693.233897111535 3183.3689042803826 2945.018056310916 3260.983599159014 3231.7320430427026 2992.75502768309 2785.131891149928 2570.043107640537 1.056591758803084 0.9292951855881233 0.8025847659342253 1.047933355321847 1.238644167024466 1.145902202011946 1.268843930852508 1.257462193313029 1.1644765874883045 1.0836907298830702 1.0 11.327576842780717 -6.514671298219958 24.322189352549977 1.123183743164971 0.9287690130594077 0.5063293758479923 0.09713872806177071 225.18889436321706 667329.9103878647 0.01668194751920519 0.03609367585035266 3.057234147690925e-07 6.514671298219958 -0.1944147301055632 TTAGS(ph)VDWTDQLGLR ddPTM_A549_PD325901_60min_R1 2 TTAGSVDWTDQLGLR 15 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 TTAGS(0.998)VDWT(0.002)DQLGLR;TT(0.001)AGS(0.999)VDWTDQLGLR 189.1 1.4307e-33 11880400.0 4704.700000000001 4860.5 4279.700000000001 4449.9 4780.1 4874.7 4317.8 4601.2 5568.200000000001 5035.9 5888.5 True False 5182.317680582914 5270.11139292623 4570.146177926748 4724.760216543848 4444.36226644977 4835.002059401637 4482.116241790817 4509.425456428429 5334.187917937097 4717.932414567927 5164.251830277003 1.0034982512277955 1.0204985283693164 0.8849580400267995 0.9148973310796927 0.8606013828360072 0.9362444393309717 0.8679120207719233 0.8732001468229232 1.032906235645557 0.9135752030734844 1.0 12.334343638799306 -8.771995490424393 24.99530274219474 1.0155390622821945 0.9190180710633277 0.11666309084831705 0.058753986136739066 149.07033293905843 352975.180909069 0.00918256323226978 0.009826037105355494 1.690458484734741e-09 8.771995490424393 -0.09652099121886681 TTAPTEGKS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 TTAPTEGKSPLK 12 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 T(0.001)T(0.001)APT(0.018)EGKS(0.98)PLK;T(0.019)T(0.012)APT(0.295)EGKS(0.674)PLK 89.624 7.657e-05 48323000.0 10702.7 11715.1 10796.2 10955.1 15467.599999999999 13040.900000000001 10428.4 11432.3 17542.8 16127.0 15761.800000000001 True False 12509.054104107618 12311.348550762155 12327.26350124274 13639.099991793128 13192.336529805818 14420.87938215118 12323.105292603954 13052.863534950391 13569.383810095089 12483.899499312069 11847.710056450132 1.055820411244571 1.0391331735924454 1.0404764669719047 1.1512013652265 1.1134925202380053 1.2171870609122615 1.0401254954661054 1.1017203723553437 1.1453170060241002 1.0536972494963768 1.0 13.532320619309786 -2.84826090438502 17.545234739734433 1.0823016641357341 0.3868050708894578 0.0 0.06175233247627323 0.0 0.0 0.009339603627714202 0.0 0.0014182052724515037 2.84826090438502 -0.6954965932462763 TTAPTEGKS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 TTAPTEGKSPLK 12 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 TTAPT(0.006)EGKS(0.994)PLK;T(0.001)TAPT(0.009)EGKS(0.99)PLK 106.14 4.2206e-05 70497000.0 12734.7 13204.7 13429.900000000001 14361.900000000001 13984.7 12857.6 12671.9 14859.4 13927.7 15692.3 15644.5 True False 14027.517369209354 14317.50641089868 14341.333774549254 15249.00194475856 13002.462916595907 12752.891968523692 13154.136088829753 14563.017610026212 13342.367203881415 14701.48549993533 13720.325678656467 1.0223895334372972 1.0435252592561413 1.0452619063451851 1.111416908162765 0.9476788832223365 0.9294890126669713 0.9587335167482587 1.0614192367664166 0.9724526601170255 1.071511409004319 1.0 13.74402710664371 -6.7723805105184764 24.996267532941946 0.9835721470477364 1.0540405775527262 0.29799823768675393 0.0462195883333425 152.7606685844991 348999.72110010433 0.005590017842902247 0.010635394897502778 1.6889604872013626e-07 6.7723805105184764 0.07046843050498974 TTAPTEGKS(ph)PLKK ddPTM_A549_MK2206_60min_R1 3 TTAPTEGKSPLKK 13 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 TTAPT(0.008)EGKS(0.992)PLKK;T(0.002)T(0.002)APT(0.012)EGKS(0.984)PLKK;T(0.001)T(0.001)APT(0.056)EGKS(0.942)PLKK 65.704 0.0017407 129919200.0 5433.1 4969.1 5268.2 4414.0 5964.4 5285.6 4873.0 5669.299999999999 7145.299999999999 7115.0 6690.400000000001 True False 6350.074453458202 5222.005965257854 6015.309977329703 5495.430198151989 5087.044660992905 5844.918683702676 5758.3610228663165 6472.940636503084 5526.900958699436 5507.71655841789 5028.98903435356 1.2626940345425626 1.0383808613591667 1.1961270816536842 1.0927504833699417 1.011544194318731 1.1622452631682858 1.1450335213559502 1.2871256215286484 1.0990083535566666 1.0951935907583197 1.0 12.29605269230408 -9.822677376828873 1.1100034568217783 1.0165787066687646 1.1401655750265762 0.14137838505636713 0.0841296726240256 0.3946925120563065 0.9906225464342228 0.024244517899453803 0.015159465124530784 1.5042590159691868e-10 9.822677376828873 0.12358686835781163 TTAPTEGKS(ph)PLKK ddPTM_A549_PD325901_60min_R1 4 TTAPTEGKSPLKK 13 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 TTAPT(0.001)EGKS(0.998)PLKK;TTAPTEGKS(1)PLKK;T(0.007)T(0.006)APT(0.007)EGKS(0.98)PLKK;TTAPT(0.001)EGKS(0.999)PLKK 96.962 3.8333e-05 283603800.0 13221.900000000001 12669.5 12362.4 11997.3 14439.3 11832.7 13235.099999999999 12191.899999999998 12817.400000000001 12903.6 13537.3 True False 14564.17755455167 13737.203228614117 13201.386805150272 12738.34597315479 13425.133380880763 11736.338414319189 13738.768973024617 11948.722990139478 12278.729251709156 12088.86449385785 11872.297920015095 1.2267361931676621 1.1570804002024784 1.11194874775628 1.072946960982141 1.130794852970106 0.9885481726779534 1.1572122823723032 1.0064372601360974 1.034233585985816 1.01824133586453 1.0 13.535311579647722 -2.0000000000031575 0.22447747957922354 1.0017046304539392 2.1597288862009973 0.6444698161753563 0.04516588522660274 18.33268160833508 0.21458956005592858 0.02431597465545849 7.853583145497148 0.009999999999927296 2.0000000000031575 1.1580242557470581 TTAPTEGKS(ph)PLKKEDR ddPTM_A549_MK2206_60min_R1 6 TTAPTEGKSPLKKEDR 16 3 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 T(0.001)T(0.002)APT(0.015)EGKS(0.982)PLKKEDR;TTAPT(0.002)EGKS(0.998)PLKKEDR;TTAPTEGKS(1)PLKKEDR;TTAPTEGKS(1)PLKKEDR;T(0.059)T(0.047)APT(0.163)EGKS(0.732)PLKKEDR;TTAPTEGKS(1)PLKKEDR 162.44 2.5187e-21 423963000.0 36604.4 41385.0 36324.6 33696.46 51534.4 38982.2 39493.2 38219.0 53659.700000000004 57783.1 54670.100000000006 True False 42782.32782834209 43491.31973037293 41475.97448891664 41952.09421269159 43953.75802720689 43107.27052970988 46668.60323173896 43636.66029077865 41505.863626933 44729.85757789417 41094.00535199879 1.0410843981228317 1.0583373257933724 1.0092950086915602 1.0208811200889927 1.0695905071971525 1.048991699895546 1.1356547708598823 1.0618741083279726 1.010022344412679 1.0884764625582677 1.0 15.326640333560663 -8.801010973230813 6.134402768922412 1.004529793114555 1.056008164710459 0.0 0.03970663423427847 0.15414817300283096 14.930419075497179 0.005618268138692167 0.006011791400974075 1.5812080867008128e-09 8.801010973230813 0.05147837159590418 TTAPTEGKS(ph)PLKKEDR ddPTM_A549_PD325901_60min_R1 5 TTAPTEGKSPLKKEDR 16 3 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 TTAPT(0.007)EGKS(0.993)PLKKEDR;TTAPTEGKS(1)PLKKEDR;TT(0.002)APT(0.072)EGKS(0.925)PLKKEDR;TTAPTEGKS(1)PLKKEDR;T(0.039)T(0.039)APT(0.169)EGKS(0.754)PLKKEDR 150.13 1.762e-15 678945900.0 32306.5 30532.0 32169.3 32369.899999999998 35587.3 36951.5 35123.5 35036.49999999999 35873.5 35819.299999999996 37338.100000000006 True False 35586.232097211716 33105.03879206334 34352.502147715706 34369.31520562321 33087.77081752009 36650.57923523078 36460.144012816665 34337.66952189744 34365.86154845668 33557.66328504001 32745.7504057172 1.0867435211073553 1.010972061470407 1.0490674888219382 1.0495809312594815 1.0104447266459093 1.1192468879513546 1.1134313173794592 1.0486145254409043 1.0494754623933316 1.0247944502496744 1.0 14.999020071958363 -10.14667502328244 0.8143587938806386 1.0029816134831164 1.0593593630102383 0.2158749856399692 0.0341718984114436 0.5758340189487573 0.7518444567017278 0.017113121138404665 0.00696265402697054 7.133866480824983e-11 10.14667502328244 0.05637774952712182 TTAQVLIR ddPTM_A549_PD325901_60min_R1 2 TTAQVLIR 8 0 P15121;C9JRZ8;C9JRZ8-2 P15121;C9JRZ8 AKR1B1;AKR1B15 Aldose reductase;Aldo-keto reductase family 1 member B15 0 ; 89.698 0.0073509 11268400.0 5429.5 5698.9 4604.6 5493.7 5528.5 5478.5 4966.6 5218.9 6388.1 5797.9 6510.8 False True 5980.698843013355 6179.16630329129 4917.095845709168 5833.033371902053 5140.19723228961 5433.884912390889 5155.606680827802 5114.804945352152 6119.630372216148 5431.819604524196 5710.012875361724 1.0474054916442694 1.0821632872237343 0.8611356844616003 1.0215446968729534 0.9002076430456356 0.9516414465259254 0.9029063144627671 0.8957606676198842 1.071736702840355 0.9512797471897286 1.0 12.479278283349954 -8.772304924797456 24.998829508530942 1.033875663949786 0.9569298221939173 0.05594808916231142 0.07168717738506762 247.73269232137534 569967.5302652376 0.012005359973358474 0.012840874941559846 1.6892544637804188e-09 8.772304924797456 -0.0769458417558686 TTAS(ph)PSVR ddPTM_A549_MK2206_60min_R1 4 TTASPSVR 8 0 Q9Y3P9;Q9Y3P9-2 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 T(0.011)T(0.002)AS(0.867)PS(0.121)VR;T(0.001)T(0.04)AS(0.959)PSVR;T(0.005)TAS(0.769)PS(0.226)VR;T(0.054)T(0.013)AS(0.894)PS(0.039)VR 119.21 0.001227 64538000.0 9486.0 9684.5 9360.5 7933.200000000001 11217.7 9330.900000000001 8982.4 8229.4 13447.7 12922.4 12789.9 True False 11087.004889566631 10177.399684156017 10687.959652783631 9876.834356134883 9567.59118999733 10318.289644649862 10614.385809931124 9395.942651480516 10401.817421564165 10003.22086500342 9613.814846717481 1.1532367812712925 1.0586223935476524 1.1117293003029804 1.0273584954163337 0.9951919547591523 1.073277341946409 1.1040763712601844 0.977337591922591 1.08196564916327 1.0405048385572868 1.0 13.230893303418245 -6.32772775869492 0.008385059514172484 2.6944376809897566e-07 2.149994656562446 0.22493224660987432 0.04592161658162733 5733.301364670255 10.15643305780969 1245.3378638279667 1360.2628754194864 4.701887581907201e-07 6.32772775869492 2.149994387118678 TTAS(ph)PSVR ddPTM_A549_PD325901_60min_R1 4 TTASPSVR 8 0 Q9Y3P9;Q9Y3P9-2 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 TT(0.001)AS(0.997)PS(0.002)VR;T(0.002)T(0.015)AS(0.977)PS(0.006)VR;T(0.016)T(0.008)AS(0.959)PS(0.017)VR;T(0.006)T(0.006)AS(0.988)PSVR 128.6 0.0010657 79641000.0 11383.4 10726.5 10273.0 10239.1 11829.0 10674.8 10555.5 11262.7 11274.599999999999 12771.0 12041.9 True False 12539.03438798383 11630.459799655016 10970.187556567394 10871.545952316708 10998.171847834627 10587.86796801866 10957.195328691236 11038.056613082777 10800.767770477634 11964.63688048751 10560.822639893457 1.1873160657596584 1.1012835075670158 1.0387625974445933 1.0294222640620339 1.0414124186016613 1.0025609111190865 1.0375323686717817 1.0451890907992878 1.0227203068137691 1.1329265994195519 1.0 13.366434597983472 -2.000000000141588 0.6414688635169631 1.015073547668719 15.968378680966824 0.5185653838936668 0.03853981511131682 38.78371163677165 0.23794100341281538 0.002777280739001267 823.9198803341714 0.009999999996739815 2.000000000141588 14.953305133298105 TTAT(ph)PLSPLKPPR ddPTM_A549_MK2206_60min_R1 1 TTATPLSPLKPPR 13 1 E5RIF5;Q9H898 E5RIF5 ZMAT4 Zinc finger matrin-type protein 4 1 TT(0.002)AT(0.508)PLS(0.49)PLKPPR 91.616 7.176800000000001e-05 24106000.0 3703.2 4450.4 4082.4 3886.9 5185.8 3843.6 3916.1 3618.5 5622.1 5697.7 6031.5 True False 4328.209625452579 4676.906350804682 4661.345706588737 4839.190674489571 4422.975689587721 4250.3272008248105 4627.604679180543 4131.433456191492 4348.7033266488625 4410.585612775491 4533.712089068441 0.9546723612839545 1.031584330659529 1.0281521223696675 1.0673793525966706 0.9755748937503719 0.9374938499233508 1.0207098704698283 0.9112694796286444 0.9591926529993675 0.9728420169004934 1.0 12.146477061082262 -6.900155648874432 15.912395026643024 0.9743788826748441 1.0217900187629552 0.30683236110380585 0.037048941254331086 1.1854304312632724 184.02701435803158 0.005352636077036104 0.010115930934107759 1.2584743003435002e-07 6.900155648874432 0.047411136088111094 TTATPLS(ph)PLKPPR ddPTM_A549_MK2206_60min_R1 1 TTATPLSPLKPPR 13 1 E5RIF5;Q9H898 E5RIF5 ZMAT4 Zinc finger matrin-type protein 4 1 TTATPLS(1)PLKPPR 116.43 4.6991000000000005e-06 21689000.0 2609.9 2405.0 2575.7 2328.4 3551.5 2737.4 2607.3 2274.0 3759.3 3568.8 3851.1 True False 3050.3873140712585 2527.4042274144467 2940.9729905106356 2898.858104525849 3029.079054643602 3027.0698510609413 3081.0126605621476 2596.3464638329287 2907.824552368523 2762.605601360754 2894.765585047083 1.0537596998624137 0.8730946092732891 1.0159623997543141 1.0014137654184871 1.046398737877193 1.0457046562586194 1.0643392599653403 0.8969107817380314 1.0045112348263696 0.9543451862323493 1.0 11.499230809739185 TTATPLS(ph)PLKPPR ddPTM_A549_PD325901_60min_R1 2 TTATPLSPLKPPR 13 1 E5RIF5;Q9H898 E5RIF5 ZMAT4 Zinc finger matrin-type protein 4 1 TTAT(0.182)PLS(0.818)PLKPPR;TTAT(0.216)PLS(0.784)PLKPPR 144.29 5.7635e-13 77456000.0 13352.599999999999 13444.1 13380.3 12521.9 14481.9 14703.099999999999 13168.9 13723.7 15501.9 14751.9 15859.2 True False 14708.146122335405 14577.08148907305 14288.367620280222 13295.34932370175 13464.741303842788 14583.362828397272 13670.049695798587 13449.970037465619 14850.409052309378 13820.46251642499 13908.61893975189 1.0574842970424911 1.0480610297986268 1.0273031191790711 0.9559072242393981 0.9680861458760318 1.0485126446822777 0.9828473808228757 0.9670241233674597 1.0677126979060287 0.9936617414202827 1.0 13.763691553729513 -8.76665015448773 24.99649373040673 1.0319754357941164 1.0065465157761215 0.00011618676744140632 0.03866503619049721 276.63173381176847 1327018.6918065103 0.007293683437949714 0.007873950916186331 1.7113933712937675e-09 8.76665015448773 -0.025428920017994905 TTCMSSQGS(ph)DDEQIKR ddPTM_A549_PD325901_60min_R1 2 TTCMSSQGSDDEQIKR 16 1 C9JEW2;C9JNR7;E7EW69;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2 C9JEW2 SEPT10 Septin-10 1 TTCMSS(0.002)QGS(0.998)DDEQIKR;TTCMS(0.005)S(0.031)QGS(0.963)DDEQIKR 97.49 1.0308e-06 56088000.0 10258.8 10647.400000000001 11332.8 9523.1 10263.5 10111.1 9395.0 9982.7 9119.5 10717.4 11460.0 True False 11300.265823870594 11544.69376505355 12101.911957662509 10111.320258470692 9542.627167152827 10028.758553924521 9752.531866141268 9783.587217223345 8736.239128915513 10040.701534957076 10050.49265092544 1.1243494439877109 1.1486694399990953 1.2041113185181203 1.0060522015843325 0.9494685980665983 0.9978375092887692 0.9703536139836153 0.9734435471998958 0.8692349153761222 0.9990258073600539 1.0 13.294978600120542 -6.420662077507351 3.8248107686936477 0.9479095710660687 1.1572164662898847 0.8001579216296424 0.04157861082736778 0.08700255968225631 2.2816062881637156 0.007568682448022731 0.018336909632879293 3.796102430330515e-07 6.420662077507351 0.20930689522381607 TTDEELS(ph)ELEDR ddPTM_A549_MK2206_60min_R1 2 TTDEELSELEDR 12 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 TT(0.002)DEELS(0.998)ELEDR;TTDEELS(1)ELEDR 64.55 0.0063895 41879000.0 283.56 537.4 0.0 0.0 665.37 469.17999999999995 450.1 340.05 584.84 696.33 483.89 True False 331.4179956236049 564.7513645790123 0.0 0.0 567.4949544103091 518.828316183522 531.877343811231 388.2531288594493 452.37467379757015 539.0285693778121 363.726758315399 0.911172983694045 1.552680278994757 0.0 0.0 1.5602232759521537 1.4264232815492488 1.4622991892997415 1.0674307566967143 1.2437211820563987 1.4819601721751892 1.0 8.506711254333442 -6.77995734195639 24.999727811336975 1.190235810441459 0.6388739416840784 0.3489176344070192 0.4401898794019095 255.0748251614797 344357.1954138079 0.06489069975419955 0.12278717906082785 1.659749926335104e-07 6.77995734195639 -0.5513618687573806 TTDEELS(ph)ELEDR ddPTM_A549_PD325901_60min_R1 2 TTDEELSELEDR 12 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-4;Q9BV36-2;H7C2D8 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 TTDEELS(0.999)ELEDR;TTDEELS(1)ELEDR 76.533 0.0011487000000000001 50216000.0 334.54999999999995 124.95 312.56 0.0 126.03 110.81 0.0 131.73 202.18 336.12 358.03 True False 368.5132697173066 135.47997501206316 333.77220117596664 0.0 117.17808757989671 109.90760009893842 0.0 129.1025418098141 193.68307769988905 314.897325837402 313.9945797391655 1.173629398390984 0.4314723366390784 1.0629871428138358 0.0 0.3731850647779852 0.3500302463508714 0.0 0.41116168921469687 0.6168357360206062 1.0028750372028281 1.0 8.294595844907807 -9.826371336887567 0.9465411153370803 0.9456550081944417 0.4651816136237775 0.23630672070224812 0.3496690173576355 0.513492222873556 0.9471953544250469 0.11903682259749072 0.06875820167654241 1.491518563960664e-10 9.826371336887567 -0.4804733945706642 TTDEGAKNNEES(ph)PTATVAEQGEDITSK ddPTM_A549_MK2206_60min_R1 1 TTDEGAKNNEESPTATVAEQGEDITSK 27 1 Q13451;Q13451-2 Q13451 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed 1 TTDEGAKNNEES(0.807)PT(0.183)AT(0.01)VAEQGEDITSK 79.558 1.2688e-06 2976200.0 875.39 1043.6 1001.6 1046.7 983.4 968.75 1121.0 973.96 1516.8 1801.4 1313.8 True False 1023.1344307693164 1096.7147824239992 1143.6419409463263 1303.1415469881485 838.7431627021028 1071.262481995794 1324.6711895409674 1112.0218126274056 1173.2472218318762 1394.4624888733651 987.5472009646227 1.036035978604296 1.1105441657398685 1.1580630675974093 1.3195739360257996 0.8493195686067764 1.0847709162148393 1.341375063639537 1.1260442149410153 1.1880416659435258 1.4120464191597861 1.0 9.947705894883658 -10.894594986273972 1.1496546557914087 1.0001392930480806 1.140152418581909 0.0 0.17551759010542026 0.780760358024777 1.8353653739964384 0.08640348737554732 0.02075293707533985 1.2746912766530892e-11 10.894594986273972 0.1400131255338284 TTDGYLLR ddPTM_A549_MK2206_60min_R1 2 TTDGYLLR 8 0 D6RAT0;P61247;H0Y9Y4;D6RG13;D6R9B6;D6RB09;D6RED7;D6RAS7;H0Y8L7;E9PFI5 D6RAT0 RPS3A 40S ribosomal protein S3a 0 ; 97.79799999999999 0.0067885 8613200.0 3389.6000000000004 3773.6000000000004 3293.8999999999996 2636.8999999999996 4393.299999999999 3688.8 2996.5 3274.3 4649.6 4753.799999999999 4003.7 False True 3961.6816122364626 3965.6601216512126 3761.024550003099 3282.9406183749384 3747.05138976932 4079.146367572736 3540.9252626757443 3738.4420521232005 3596.47302388548 3679.913278342511 3009.470793501338 1.3164047382653894 1.317726734618815 1.249729539866168 1.090869738780696 1.2450864776161696 1.3554364363266989 1.1765939946392008 1.242225729585416 1.195051645509143 1.2227775349370158 1.0 11.555294100313027 -10.753029732688551 0.3314454244415432 0.8958309819797851 1.2692912748585286 0.06864345410618866 0.09508268316487253 1.5549347098632726 0.21200872059723588 0.21526049467751518 0.029439133013477968 1.765916918263309e-11 10.753029732688551 0.3734602928787435 TTDGYLLR ddPTM_A549_PD325901_60min_R1 1 TTDGYLLR 8 0 D6RAT0;P61247;H0Y9Y4;D6RG13;D6R9B6;D6RB09;D6RED7;D6RAS7;H0Y8L7;E9PFI5 D6RAT0 RPS3A 40S ribosomal protein S3a 0 104.37 0.0009152000000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TTDLSIQS(ph)PSADLEVQAGQVDVK ddPTM_A549_PD325901_60min_R1 1 TTDLSIQSPSADLEVQAGQVDVK 23 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 TTDLS(0.003)IQS(0.619)PS(0.378)ADLEVQAGQVDVK 116.35 1.0544000000000001e-15 2529000.0 853.69 805.45 992.67 1103.8 1062.8 1113.3 959.44 976.97 1161.0 1161.3 1158.5 True False 940.3559803466383 873.3280982270207 1060.0385556096326 1171.979219088317 988.1525944609562 1104.233653913438 995.9520142257137 957.4835669318611 1112.2072074862554 1087.9753198113028 1016.011844336572 0.9255364350212522 0.8595648791843368 1.0433328720708062 1.153509406038064 0.9725797981284291 1.0868314774760057 0.980256302893834 0.9423940993100053 1.0946793717867493 1.070829366680977 1.0 9.988701505341096 -5.768447481592786 24.995129595773566 1.0396085353817504 0.8925506464582298 0.4620416907882774 0.06063000781226782 92.41773040606584 329622.78848003026 0.008455171495894143 0.027121353457211048 1.7043254076903379e-06 5.768447481592786 -0.14705788892352056 TTEATLNS(ph)LGISEELKEK ddPTM_A549_MK2206_60min_R1 1 TTEATLNSLGISEELKEK 18 1 M0R0W6;P30530-2;P30530 M0R0W6 AXL Receptor protein-tyrosine kinase;Tyrosine-protein kinase receptor UFO 1 TTEAT(0.001)LNS(0.999)LGISEELKEK 109.08 8.9729e-10 2440900.0 3712.7 4747.9 5041.6 3839.2 6231.5 5025.0 4621.7 4590.9 6830.0 5977.8 6329.7 True False 4339.31299319988 4989.547830079444 5756.574689971044 4779.804172348238 5314.854604818135 5556.742164674959 5461.4030657462 5241.674134041596 5283.015905268802 4627.410828237594 4757.860799167124 0.9120302540081643 1.0486956303876895 1.2099081778472265 1.0046120250480963 1.1170681171984926 1.1679076793603715 1.1478694514774859 1.1016871563285677 1.1103763073929376 0.9725822220455953 1.0 12.216097348083602 -3.2202246971442308 13.423397156227757 1.0722626065423413 1.0841555282963347 0.0 0.0874388846623761 0.0 0.0 0.01112764441925024 0.0 0.0006022479118425043 3.2202246971442308 0.011892921753993368 TTEATLNS(ph)LGISEELKEK ddPTM_A549_PD325901_60min_R1 1 TTEATLNSLGISEELKEK 18 1 M0R0W6;P30530-2;P30530 M0R0W6 AXL Receptor protein-tyrosine kinase;Tyrosine-protein kinase receptor UFO 1 TTEATLNS(1)LGISEELKEK 170.56 8.009699999999999e-31 7591800.0 2928.7 2668.6 3060.1 3146.7 2811.8 3084.4 3030.6 3465.3 3367.8 3389.4 3372.7 True False 3226.019468005011 2893.4922874525128 3267.7767878761724 3341.0645123257877 2614.3088681833965 3059.281669029561 3145.931141407953 3396.1818730247414 3226.2630778399766 3175.3927055613754 2957.8792813068244 1.09065284996341 0.9782320413611116 1.1047701671017593 1.129547285259616 0.8838456946858106 1.0342821251575676 1.0635765838347686 1.1481813657805096 1.0907352095906284 1.073536951162676 1.0 11.530347458189702 -7.744214832059896 21.99963797003555 1.0549247456022914 1.0345629643370524 0.03284041119107006 0.07160705820973942 292.4296235413239 373491.42543388787 0.011656935914118965 0.01725429679039702 1.802126064259526e-08 7.744214832059896 -0.02036178126523902 TTEDDIPTLPTS(ph)EHK ddPTM_A549_MK2206_60min_R1 1 TTEDDIPTLPTSEHK 15 0 A0A087WZ58;O15151-5;O15151;Q5T0Y2 A0A087WZ58 MDM4 Protein Mdm4 1 TTEDDIPTLPT(0.163)S(0.837)EHK 65.943 0.0010899 985740.0 358.73 299.99 346.47 232.06 501.85 446.23 173.93 279.98 349.56 608.68 463.59 True False 419.2748538935528 315.2582096391104 395.6046558303448 288.91471041756915 428.0285297966751 493.44976241649914 205.53082961361338 319.66802240278923 270.38521813261525 471.1787652533807 348.46780856689685 1.203195370091303 0.9046982300478092 1.135268871627776 0.8291001444459251 1.2283158423068645 1.4160555158476553 0.5898129599370346 0.917353094156533 0.7759259578226098 1.3521443119556522 1.0 8.444881575951623 -7.766144711486966 24.999995750880526 0.8728527199780127 1.1021493058686769 0.12776206305104343 0.22896582508347765 122.12789157814795 648880.7811885762 0.028394603755926517 0.0399327628747108 1.7133862940544172e-08 7.766144711486966 0.22929658589066415 TTEEQVQAS(ph)TPCPR ddPTM_A549_MK2206_60min_R1 1 TTEEQVQASTPCPR 14 0 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 TTEEQVQAS(0.5)T(0.5)PCPR 137.8 2.6455e-09 25524000.0 617.05 758.34 710.67 576.21 1029.1 524.11 636.07 641.21 1268.8 981.15 977.91 True False 721.1929545759114 796.936266867972 811.4536922647013 717.3814758670499 877.7207532405271 579.5709723239389 751.6356855765599 732.1034811232678 981.4188258572551 759.5075335617313 735.0679580570204 0.9811241894997241 1.0841667877545444 1.1039165608709005 0.975938983605379 1.1940674921548422 0.7884590342584089 1.0225390419184268 0.9959670709337018 1.3351402616588068 1.0332480490229925 1.0 9.52173382505654 TTEEQVQAST(ph)PCPR ddPTM_A549_MK2206_60min_R1 2 TTEEQVQASTPCPR 14 0 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 TTEEQVQAS(0.019)T(0.981)PCPR;TTEEQVQAS(0.181)T(0.819)PCPR 185.95 4.2298e-26 25766000.0 1386.1 843.94 723.3 769.06 1296.1 964.83 1053.8 1123.5 1281.8 1429.5 1576.7 True False 1620.0397931086134 886.8929412408106 825.8748161805881 957.4797345244151 1105.4454069332874 1066.9276701976792 1245.261819391857 1282.7595655744487 991.4743466139892 1106.574957169133 1185.1618752937432 1.3669354599405128 0.7483306371300491 0.6968455815167819 0.8078894153485178 0.9327379069287914 0.9002379273575944 1.0507103251893064 1.0823496708046874 0.8365729334385242 0.9336909836851339 1.0 10.21086840769617 -6.968590608695338 23.888819150799716 0.9424848720033046 0.8778628646818566 0.008017792945037017 0.17614470238940144 441.47773324138166 335768.2047598162 0.02509178411806905 0.047418600148524365 1.0750022947173414e-07 6.968590608695338 -0.06462200732144796 TTEEQVQAST(ph)PCPR ddPTM_A549_PD325901_60min_R1 4 TTEEQVQASTPCPR 14 0 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 TTEEQVQAS(0.064)T(0.936)PCPR;TTEEQVQAS(0.211)T(0.789)PCPR;TTEEQVQAS(0.002)T(0.998)PCPR;TTEEQVQAS(0.216)T(0.784)PCPR 215.87 1.6177e-38 83964400.0 3307.5499999999997 3671.29 3790.54 3688.76 4269.68 4524.12 3737.0199999999995 3756.42 4105.46 4444.43 4344.79 True False 3643.330041110382 3980.6824926933746 4047.788838768712 3916.6063274182084 3969.7924063963624 4487.277066687204 3879.234341075809 3681.4952562455164 3932.921793321725 4163.80793130883 3810.4083738930494 0.956152119041255 1.0446865800440066 1.0622979065713982 1.027870491323915 1.0418285960096376 1.17763678492618 1.0180626222780529 0.9661681623075419 1.032152306893947 1.0927458484075072 1.0 11.895729908999623 -7.971616316831739 24.999980159323197 1.0109874837749082 1.0543249929870997 0.05040792883597012 0.056502658397244415 322.04521989690886 283652.55684243265 0.007858413015405252 0.010857844337878265 1.0675388359580897e-08 7.971616316831739 0.04333750921219148 TTEINRLPSANQGS(ph)PFK ddPTM_A549_MK2206_60min_R1 2 TTEINRLPSANQGSPFK 17 1 Q56NI9;E5RFE4;E5RFP7;E5RIE3 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 TTEINRLPS(0.175)ANQGS(0.825)PFK;TTEINRLPS(0.001)ANQGS(0.999)PFK 109.85 1.7896e-09 53278000.0 5255.4 6464.5 6692.4 5944.0 8809.2 5680.8 5754.7 5168.4 9909.3 9163.1 9397.9 True False 6142.383037806079 6793.515437888026 7641.4829528646105 7400.280266836296 7513.378349476674 6281.93848539015 6800.254499956654 5901.036527561173 7664.859371900459 7093.149345950665 7064.142061154985 0.869515786153627 0.9616900933016187 1.0817283807023597 1.0475837267670056 1.0635938921432504 0.8892712562979028 0.9626440749755838 0.835350772461158 1.0850375467459465 1.0041062714402629 1.0 12.786298640794415 TTEINRLPSANQGS(ph)PFK ddPTM_A549_PD325901_60min_R1 2 TTEINRLPSANQGSPFK 17 1 Q56NI9;E5RFE4;E5RFP7;E5RIE3 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 TTEINRLPSANQGS(1)PFK;TTEINRLPSANQGS(1)PFK 164.27 3.2477e-23 73801000.0 23133.6 21416.5 23001.2 22712.1 23809.1 28458.0 25239.0 28390.0 28652.0 27756.0 29761.0 True False 25482.106041943767 23221.343616213297 24562.199749451785 24114.9748340784 22136.83095293596 28226.24748321981 26199.483956310738 27823.739178475862 27447.856080013968 26003.481423131416 26100.58567052287 0.9763039942326814 0.8896866878523231 0.9410593332850579 0.9239246635493336 0.8481354109205511 1.0814411538319462 1.0037891213260997 1.0660197257527084 1.0516183976290103 0.9962796142348208 1.0 14.671794559313154 -7.266629396699594 24.99988282205009 1.030264375141086 0.9162222749208595 0.6913268841325699 0.03902367942086234 189.84633170117166 914473.6027473595 0.005642183819495276 0.009187615805791279 5.412159702309692e-08 7.266629396699594 -0.11404210022022654 TTEKT(ph)PSLTR ddPTM_A549_MK2206_60min_R1 2 TTEKTPSLTR 10 1 P98170 P98170 XIAP E3 ubiquitin-protein ligase XIAP 1 TT(0.002)EKT(0.975)PS(0.021)LT(0.001)R;T(0.002)T(0.01)EKT(0.985)PS(0.003)LTR 105.65 0.00012417 64236000.0 7189.8 7543.799999999999 7111.2 5856.9 9843.0 7830.4 7931.2 6863.5 10453.8 10333.5 10811.6 True False 8403.262466266737 7927.74719782499 8119.675090313012 7291.840762926232 8395.10773894326 8659.007730601152 9372.19637688432 7836.422143587206 8086.030991288283 7999.1551730725605 8126.781335019874 1.0340209881193003 0.9755088602744597 0.9991255769764298 0.8972606081455986 1.033017549366945 1.065490428946059 1.153248252970424 0.9642713173318133 0.9949856724265498 0.9842956077337349 1.0 12.988468361262719 -4.880192867162156 9.509442064818359 1.004473415975396 1.4412784429856629 0.015003397875515079 0.06117584755620555 111457.42236244983 265176.0020733657 0.008276616716073082 964115.3787134563 1.3176714398705498e-05 4.880192867162156 0.4368050270102668 TTEKT(ph)PSLTR ddPTM_A549_PD325901_60min_R1 2 TTEKTPSLTR 10 1 P98170 P98170 XIAP E3 ubiquitin-protein ligase XIAP 1 T(0.002)T(0.002)EKT(0.983)PS(0.012)LTR;TTEKT(0.996)PS(0.004)LTR 106.32 0.00011714 80870000.0 9343.599999999999 8926.0 9289.8 10143.3 10927.5 11164.400000000001 10324.7 10941.9 12026.2 10594.7 12803.6 True False 10292.155393605226 9678.225345799723 9920.261692105505 10769.828603894286 10159.99009782846 11073.48082794503 10717.612108392632 10723.65522074551 11520.780636237043 9925.748833897187 11228.83836870759 0.9165823797310413 0.8619079755187234 0.8834628628862615 0.9591222395637587 0.9048122133579032 0.9861644156179584 0.9544720260877886 0.9550102039610866 1.0259993294001841 0.8839515280189767 1.0 13.45492106718223 -7.2932870053932985 0.5731560200642106 1.0122541279135537 0.8804971814190454 0.12381069205630979 0.04734705046969683 0.3286215069957851 0.20327435232045588 0.00625438975648726 0.018939752727563517 5.089943887355974e-08 7.2932870053932985 -0.1317569464945083 TTES(ph)GSDSESKPDQEAEPQEAAGAQGR ddPTM_A549_MK2206_60min_R1 1 TTESGSDSESKPDQEAEPQEAAGAQGR 27 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55;J3QRQ6;J3KS70 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 T(0.023)T(0.023)ES(0.438)GS(0.375)DS(0.133)ES(0.008)KPDQEAEPQEAAGAQGR 103.18 6.9297e-13 5005600.0 459.07 475.96 344.97 264.22 819.21 796.27 505.39 601.39 629.04 1043.5 1088.3 True False 536.549792816082 500.18433101046986 393.8919332750142 328.9539118612864 698.7052942009249 880.5307628787523 597.2128211258789 686.6388741796322 486.5634443704667 807.7726252577747 818.0450744480116 0.655892700262424 0.61143859505294 0.4815039483500329 0.4021219883063938 0.8541158867955863 1.076384163150061 0.7300487953293495 0.8393655748651164 0.5947880618910673 0.9874426856036406 1.0 9.676036527918567 -6.775144811971062 24.961802591529132 0.8240716920234543 0.538986730186208 0.5410870551584043 0.14295672146082403 181.3023097972322 330207.2339814543 0.02520082358171932 0.04780436580886624 1.6782443278620512e-07 6.775144811971062 -0.2850849618372463 TTESGS(ph)DSESKPDQEAEPQEAAGAQGR ddPTM_A549_MK2206_60min_R1 1 TTESGSDSESKPDQEAEPQEAAGAQGR 27 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55;J3QRQ6;J3KS70 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 T(0.001)T(0.001)ES(0.132)GS(0.864)DS(0.001)ESKPDQEAEPQEAAGAQGR 158.13 1.8994e-41 5568000.0 525.22 534.88 804.38 452.29 1070.2 596.84 540.75 653.78 890.12 1021.4 687.59 True False 613.864295603857 562.1031073428028 918.4531793714114 563.1010703040694 912.7749976853671 659.9972126496725 638.9972754186248 746.455317117279 688.5092412295553 790.665030606892 516.8424264814013 1.1877204040368137 1.0875715276888753 1.777046798623182 1.0895024120554329 1.7660605068732946 1.2769795566955506 1.2363483388328596 1.4442609175857595 1.332145361821088 1.529799006613371 1.0 9.013580692395601 -10.46219090802099 0.6419033933695608 0.9774122448639763 1.3659889130376073 0.0 0.2720376894612806 0.8921619723410708 0.6147444291242941 0.18582108913170733 0.04423259672778904 3.449920537148849e-11 10.46219090802099 0.388576668173631 TTESGS(ph)DSESKPDQEAEPQEAAGAQGR ddPTM_A549_PD325901_60min_R1 1 TTESGSDSESKPDQEAEPQEAAGAQGR 27 1 Q9Y2J2;Q9Y2J2-4;Q9Y2J2-2;Q9Y2J2-3;A0A0A0MSA4;A0A0A0MRA8;J3QKY2;J3KRD1;J3QKK4;J3QR33;J3QS55;J3QRQ6;J3KS70 Q9Y2J2 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed 1 TTES(0.019)GS(0.975)DS(0.004)ES(0.001)KPDQEAEPQEAAGAQGR 174.46 4.716899999999999e-49 7112400.0 686.87 1114.0 1101.3 909.84 1337.9 1040.9 1013.7 935.45 1101.0 1365.0 1259.6 True False 756.6005367530316 1207.88068958334 1176.0408406548895 966.0387504034375 1243.9305195044349 1032.4232555092956 1052.276908217925 916.7917159036718 1054.7287988306355 1278.8136670476422 1104.6771852622765 0.6849064566979328 1.0934241294180078 1.0646013662133067 0.8744986891116766 1.1260579435331566 0.9345927201928896 0.9525650771615145 0.829918213333974 0.9547846311139466 1.1576356279540811 1.0 10.109409123724323 -7.429578480488497 0.005033570286325443 1.9178232255221854 9.73218273151048e-05 0.051832784210477545 0.13012981643657087 40603.68012741803 76.58059900181962 14386.860051317424 14787.586794414587 3.718960105040405e-08 7.429578480488497 -1.9177259036948704 TTFS(ph)PPVVAATVK ddPTM_A549_MK2206_60min_R1 2 TTFSPPVVAATVK 13 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 T(0.009)T(0.009)FS(0.982)PPVVAATVK;TTFS(1)PPVVAATVK 125.61 2.42e-06 4721100.0 4058.4 4224.8 4188.3 3598.7 5294.5 4481.7 3683.8 3553.0 6409.2 5516.1 6020.4 True False 4743.358701646343 4439.824274420191 4782.263918995101 4480.381661551779 4515.686063581738 4955.950519288312 4353.098776120446 4056.6486306061543 4957.526433389283 4270.009178902173 4525.368525412858 1.0481707014598547 0.9810967326722054 1.0567678393791822 0.9900589612517857 0.9978604036827617 1.0951484926492636 0.9619324374744275 0.8964239283111333 1.0954967325974847 0.9435715908932769 1.0 12.143819568158836 TTFS(ph)PPVVAATVK ddPTM_A549_PD325901_60min_R1 2 TTFSPPVVAATVK 13 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 TTFS(1)PPVVAATVK;TT(0.001)FS(0.999)PPVVAATVK 202.13 1.1976e-30 16555500.0 5284.3 5344.2 5082.200000000001 6218.6 6260.1 6716.2 6697.5 6526.1 7509.3 6821.700000000001 7478.7 True False 5820.758245903945 5794.574489471528 5427.1086537512765 6602.708798534699 5820.412172172591 6661.505493949011 6952.377027512623 6395.931815873587 7193.7102352941765 6390.976697801399 6558.867311385349 0.8874639430195299 0.8834718274316806 0.8274460201886559 1.0066843076811824 0.8874111787669656 1.015648766424272 1.0599965965837106 0.9751579826551869 1.0967915485661406 0.9744024988441962 1.0 12.679230973691075 -7.026402583484494 0.9596251727419 1.0434482405477055 0.8729768461104899 0.5407016065776078 0.05395190858343808 0.2660956585856024 0.47588666925503526 0.008904178727549367 0.024488344122872756 9.410168856896505e-08 7.026402583484494 -0.1704713944372156 TTGIVMDSGDGVTHTVPIYEGYALPHAILR ddPTM_A549_MK2206_60min_R1 4 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;A0A2R8YEA7 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;; 190.19 1.3612999999999998e-66 41527600.0 4055.2700000000004 4783.1 4608.4 4745.3 5851.2 4813.59 4862.3 4901.450000000001 6765.4 7079.2 7610.400000000001 False True 4739.700434167501 5026.5393597280845 5261.940415991459 5907.89871302461 4990.496231037769 5322.96089879756 5745.716971369356 5596.245547561084 5233.047702123799 5480.003803282072 5720.527643645272 0.8285425277915863 0.8786845677272246 0.9198348026229292 1.032754158541211 0.8723839026600161 0.9305017352220376 1.004403322436885 0.9782743649141791 0.9147840947743698 0.9579542560850327 1.0 12.481932507498378 -5.707121507052669 2.2772897865250568 0.9593432442873444 0.8352821186391277 0.4866245788310676 0.04319690809671947 0.22560432523313448 2.173142749144974 0.006529995117968629 0.038620662798641896 1.9628110440893204e-06 5.707121507052669 -0.1240611256482167 TTGIVMDSGDGVTHTVPIYEGYALPHAILR ddPTM_A549_PD325901_60min_R1 5 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;A0A2R8YEA7 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;; 220.5 4.0744999999999994e-91 102243300.0 10302.3 9863.8 10049.259999999998 11879.400000000001 14314.0 12797.4 11782.4 12894.7 12933.5 12499.2 13305.900000000001 False True 11348.18191184759 10695.057043009103 10731.263214709483 12613.163557925125 13308.634020619238 12693.182217364445 12230.785679576673 12637.505092803542 12389.949972457784 11709.99837887318 11669.35865304963 0.9724769157627952 0.9165076985798267 0.9196103688102012 1.0808789011407105 1.1404769033421733 1.0877360611456786 1.0481112152963368 1.082964837103614 1.0617507217690867 1.0034826014892368 1.0 13.51043765237786 -6.256431595517997 24.793803932428716 1.0498447461536842 0.9342292572204094 0.6461508715066125 0.04098708844684232 220.54036234999964 1091901.1025004887 0.006731219193002571 0.017199447868949724 5.540748078047033e-07 6.256431595517997 -0.11561548893327478 TTGS(ph)LPK ddPTM_A549_PD325901_60min_R1 2 TTGSLPK 7 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 T(0.271)T(0.034)GS(0.695)LPK;T(0.257)T(0.008)GS(0.736)LPK 77.732 0.017093 17999100.0 13032.9 14811.5 14448.900000000001 14830.1 16415.4 14013.6 14073.4 14486.3 15147.9 15564.9 17116.4 True False 14355.990413686113 16059.71708596377 15429.489242294052 15746.12159539921 15262.438934055686 13899.477887794274 14608.970938259978 14197.359382217493 14511.28644124122 14582.129557677554 15011.191309799318 0.9563525051016112 1.0698496045067372 1.0278657385587824 1.0489588248149317 1.0167373540894356 0.9259410263275162 0.9732052997501424 0.9457849872947423 0.9666978550708524 0.9714172084502265 1.0 13.873750855411362 -7.021007089195567 23.974010476129088 0.9759404770682332 1.0295307273369347 0.4394065921514786 0.032280607353278055 358.2148762257459 408807.3819336096 0.00473026242119642 0.008256840760059626 9.527806112052408e-08 7.021007089195567 0.05359025026870157 TTGT(ph)PPDSSLVTYELHSRPEQDK ddPTM_A549_MK2206_60min_R1 1 TTGTPPDSSLVTYELHSRPEQDK 23 1 F8VW18;F8W1I6;Q13561;Q13561-3;Q13561-2;H0YI98 F8VW18 DCTN2 Dynactin subunit 2 1 T(0.168)T(0.168)GT(0.665)PPDSSLVTYELHSRPEQDK 150.17 9.3689e-28 17303000.0 1692.9 1985.7 2112.2 1712.8 2587.9 2284.7 1851.0 2179.1 2879.1 2393.6 3676.8 True False 1978.620132568772 2086.763648389551 2411.741720913368 2132.4360768905126 2207.223338170402 2526.4654375388795 2187.302740267914 2487.994098213866 2226.9884469779513 1852.884097572602 2763.7490854823595 0.7159188737364853 0.7550481551856746 0.8726341090737783 0.7715736888315737 0.7986337651868181 0.9141442871243622 0.7914259480925933 0.9002243044721385 0.8057853220742986 0.6704241377430312 1.0 11.432410927319497 -14.999999999998897 0.1837311970247752 1.7947748454644725 0.7729216201120779 0.0 0.11162698063341613 23.29663596328006 0.2618607687492912 6.679732312338338 0.05684697110151356 1.00000000000254e-15 14.999999999998897 -1.0218532253523946 TTGT(ph)PPDSSLVTYELHSRPEQDK ddPTM_A549_PD325901_60min_R1 2 TTGTPPDSSLVTYELHSRPEQDK 23 1 F8VW18;F8W1I6;Q13561;Q13561-3;Q13561-2;H0YI98 F8VW18 DCTN2 Dynactin subunit 2 1 T(0.033)T(0.033)GT(0.934)PPDSSLVTYELHSRPEQDK;T(0.128)T(0.128)GT(0.745)PPDSSLVTYELHSRPEQDK 220.98 3.2201999999999995e-75 42211000.0 5317.0 5823.6 4609.0 5426.3 6659.200000000001 5784.7 5386.2 6254.299999999999 5719.4 5592.1 6888.9 True False 5856.777925831481 6314.375209925978 4921.794456168513 5761.470226978559 6191.480764992849 5737.591321111175 5591.174788441732 6129.553080096562 5479.033507749258 5239.013851646244 6041.6089723351 0.9694069829163107 1.0451479463235525 0.8146496204414607 0.9536317648759937 1.024806602569617 0.9496793565065134 0.9254446644998156 1.014556405117273 0.9068831718236137 0.8671554010919958 1.0 12.560717097008533 -11.194350122365176 1.6257327275095754 0.9999841432731369 0.9493658001859234 0.0 0.07204050251419318 0.8114834977466238 3.859148048553008 0.043283140236366875 0.009070081538898827 6.392192977076244e-12 11.194350122365176 -0.05061834308721347 TTGT(ph)PPDSSLVTYELHSRPEQDKFSQAAK ddPTM_A549_MK2206_60min_R1 2 TTGTPPDSSLVTYELHSRPEQDKFSQAAK 29 2 F8VW18;F8W1I6;Q13561;Q13561-3;Q13561-2;H0YI98 F8VW18 DCTN2 Dynactin subunit 2 1 T(0.122)T(0.122)GT(0.755)PPDSSLVTYELHSRPEQDKFSQAAK;T(0.024)T(0.024)GT(0.952)PPDSSLVTYELHSRPEQDKFSQAAK 249.13 5.723199999999999e-138 64756000.0 2447.6 3753.0 3778.0 3040.8 4728.1 3186.6000000000004 3415.5 3612.3 6060.9 5332.5 5406.299999999999 True False 2860.69504192529 3944.0116696409264 4313.777209360241 3785.7961365067003 4032.602753276197 3523.8038969061163 4036.052139051897 4124.354587204787 4688.115827268474 4127.884546417908 4063.7665037106367 0.7039516269729525 0.9705310740761405 1.0615219170248384 0.9315978496918755 0.9923313137194314 0.8671275511741438 0.9931801286728867 1.014909341724931 1.1536380899315308 1.0157779839586563 1.0 11.988601794642165 -8.240357619751066 2.5333150758512604 1.0721162229027024 0.9341931169291786 0.26484614690731567 0.0935248479768074 0.27897233914005903 3.5379203365231926 0.016454883512523017 0.02114780564168273 5.749662864145009e-09 8.240357619751066 -0.13792310597352375 TTGT(ph)PPDSSLVTYELHSRPEQDKFSQAAK ddPTM_A549_PD325901_60min_R1 2 TTGTPPDSSLVTYELHSRPEQDKFSQAAK 29 2 F8VW18;F8W1I6;Q13561;Q13561-3;Q13561-2;H0YI98 F8VW18 DCTN2 Dynactin subunit 2 1 T(0.133)T(0.133)GT(0.734)PPDSSLVTYELHSRPEQDKFSQAAK;T(0.128)T(0.128)GT(0.744)PPDSSLVTYELHSRPEQDKFSQAAK 212.17 5.059399999999999e-90 102607000.0 2609.3599999999997 2652.7 2545.2 3083.1000000000004 3350.2 3861.0 3017.1 3416.1 3078.8 3171.3 3499.0 True False 2874.260306290694 2876.252338651458 2717.932577530938 3273.5360847718675 3114.893509562563 3829.557296110468 3131.9173915204688 3347.9632056213914 2949.4087428154053 2971.063576782558 3068.6451819884924 0.9366544959844996 0.9373036529389941 0.8857109298539718 1.0667691735707956 1.0150712528921644 1.2479635373252578 1.0206189395578722 1.0910232389434806 0.9611436213372113 0.9682004274138005 1.0 11.583386125716125 -6.25669528575883 24.88328927628972 1.017850010332095 0.921631088787813 0.2930480810684265 0.07889921252728846 470.208497457668 2466280.201259079 0.01190159597091144 0.03036798379040458 5.53738492747503e-07 6.25669528575883 -0.09621892154428213 TTHLAGALS(ph)PGGGQSAPAFPESGPSLR ddPTM_A549_MK2206_60min_R1 2 TTHLAGALSPGGGQSAPAFPESGPSLR 27 0 A0A2R8Y4Z8 A0A2R8Y4Z8 1 TTHLAGALS(1)PGGGQSAPAFPESGPSLR;TTHLAGALS(1)PGGGQSAPAFPESGPSLR 122.09 3.4213e-18 33488000.0 3201.2 3609.9 3546.8 2410.2 3796.5 3151.3 2935.3999999999996 3056.6 4922.9 4433.7 5249.6 True False 3741.4842981742268 3793.628490870445 4049.789572831897 3000.6991081979877 3238.0398791931398 3484.768474336357 3468.724183566955 3489.8824104449122 3807.871010255896 3432.1240906616163 3945.9794384106253 0.9481763289879772 0.9613908410020645 1.0263078244683113 0.7604446893434952 0.820592182430978 0.8831187614449313 0.8790527770626446 0.8844147479517984 0.9650002159640353 0.869777489779323 1.0 11.946167723191802 -8.88708538914278 3.1470518902614546 0.9857072945503969 0.893908654373038 0.008745000979155426 0.07537809908293011 0.2559612622794395 4.803131590412074 0.012924508855451378 0.013537408929535739 1.296924250157688e-09 8.88708538914278 -0.09179864017735884 TTHLAGALS(ph)PGGGQSAPAFPESGPSLR ddPTM_A549_PD325901_60min_R1 2 TTHLAGALSPGGGQSAPAFPESGPSLR 27 0 A0A2R8Y4Z8 A0A2R8Y4Z8 1 TTHLAGALS(1)PGGGQSAPAFPESGPSLR;T(0.001)T(0.001)HLAGALS(0.998)PGGGQS(0.001)APAFPESGPSLR 108.08 4.0682e-13 72263000.0 7639.3 8618.7 10797.4 12057.2 12454.3 12677.400000000001 10653.2 11377.5 12086.5 11597.0 12434.900000000001 True False 8414.836112244577 9345.028096330278 11530.176494040768 12801.945860112026 11579.552933002524 12574.15945757858 11058.613355654717 11150.56683702392 11578.546436935945 10864.763440843599 10905.486131325722 0.7716149478264138 0.8569107313324557 1.057282211466084 1.1738996048363926 1.0618098811515209 1.153012282639986 1.014041302009375 1.022473157339975 1.0617175885150938 0.9962658528018161 1.0 13.412766461643738 -5.6618172492991015 3.732924023348344 1.0498973712834034 0.789409115185991 0.7445485999319021 0.05605768196437139 0.08730398068026188 2.2426572973486514 0.00820827151800949 0.03714471214023231 2.1786263433665194e-06 5.6618172492991015 -0.26048825609741244 TTHS(ph)PYEER ddPTM_A549_MK2206_60min_R1 4 TTHSPYEER 9 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TTHS(1)PYEER;TTHS(1)PYEER;T(0.046)T(0.005)HS(0.949)PYEER;TTHS(0.999)PYEER 151.66 6.2408000000000005e-06 320225000.0 4109.72 4740.62 4133.790000000001 3155.03 5464.02 4880.41 4113.33 4785.6900000000005 7609.44 6744.64 7875.0 True False 4803.340262992812 4981.897309174837 4720.023581334376 3928.0124916346767 4660.269896143526 5396.851746846036 4860.66881719407 5464.076213060952 5885.913989778711 5221.0211396440845 5919.420161056779 0.8114545229604523 0.8416191406635057 0.797379380566174 0.6635806184998733 0.787284863947137 0.9117196617248656 0.8211393489470271 0.9230762582133492 0.9943396193602709 0.8820156362598848 1.0 12.531240147722748 -8.195800684624274 0.9911884117440086 1.0011465181317187 0.7849902338514602 0.5357431964096634 0.06388990251520077 0.17900643985489353 0.34642840503724837 0.010821804217649594 0.014814275528247538 6.37087839307868e-09 8.195800684624274 -0.21615628428025857 TTHS(ph)PYEER ddPTM_A549_PD325901_60min_R1 4 TTHSPYEER 9 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 T(0.057)T(0.004)HS(0.939)PYEER;TT(0.001)HS(0.999)PYEER;T(0.342)T(0.048)HS(0.61)PYEER;TTHS(1)PYEER 173.07 4.1683000000000003e-08 478529000.0 8647.9 7492.200000000001 7235.63 8014.100000000001 9191.8 9179.900000000001 8153.0999999999985 7545.7 9495.0 9102.0 10490.7 True False 9525.828441752501 8123.593987878188 7726.68336317782 8509.112755658341 8546.199677988536 9105.141937986142 8463.370682047509 7395.195094012864 9095.958169751933 8527.298166642959 9200.410406026484 1.0353699477919878 0.8829599582380635 0.8398194235027453 0.9248623028908226 0.928893310280004 0.9896451936559332 0.9198905601541214 0.8037896971605569 0.9886470025069608 0.9268388898235865 1.0 13.167482502085342 -8.957230136827594 24.999839654452547 0.9949915001412827 0.9141936729405329 0.10725162389943277 0.06332093596681086 129.73303982109894 75831.83330658152 0.010136233651898922 0.010783073664552507 1.10349371299828e-09 8.957230136827594 -0.0807978272007498 TTIFS(ph)PEGR ddPTM_A549_MK2206_60min_R1 2 TTIFSPEGR 9 0 P25789;H0YMZ1;H0YL69;H0YLS6;H0YLC2;H0YMI6;H0YMA1 P25789 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type 1 TTIFS(1)PEGR;TTIFS(1)PEGR 134.84 4.5856e-05 39038000.0 3363.5 3397.4 3471.8999999999996 3170.1 4787.1 3714.1000000000004 3833.6 3722.8 5739.2 5775.3 5327.6 True False 3931.1765703201986 3570.3131485313306 3964.2676265690366 3946.774642311195 4082.9239314330225 4107.123596779954 4530.11549707784 4250.518300596844 4439.280363619138 4470.655718879954 4004.6098857201423 0.9816628042442296 0.8915508003070535 0.9899260451573672 0.9855578333322356 1.0195559737272128 1.0255989257344045 1.1312251695805813 1.0614063346728417 1.108542527313077 1.116377336734263 1.0 11.967445992127592 -6.665812904771967 1.2321900003281923 1.0583279330632964 0.9426881014392939 0.5845768336948136 0.043863392409158694 0.31271954873642965 0.9251810658116382 0.007703791810707068 0.023927314078582028 2.1586741714911153e-07 6.665812904771967 -0.11563983162400249 TTIFS(ph)PEGR ddPTM_A549_PD325901_60min_R1 2 TTIFSPEGR 9 0 P25789;H0YMZ1;H0YL69;H0YLS6;H0YLC2;H0YMI6;H0YMA1 P25789 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type 1 TTIFS(1)PEGR;TTIFS(1)PEGR 175.43 9.4656e-08 62867000.0 10180.3 10503.7 10121.8 9024.4 11482.7 11353.3 10128.7 11219.4 10754.8 10688.9 12253.8 True False 11213.796561659245 11388.883661738353 10808.726215327943 9581.816692100563 10676.194765164484 11260.842488974613 10514.153221137316 10995.620265550971 10302.81315682444 10014.001029820916 10746.660283238234 1.0434680418017503 1.059760275431969 1.005775369319761 0.891608782595045 0.9934430310239121 1.0478457671671597 0.9783647146208237 1.023166265216464 0.9586990642008039 0.9318244706627546 1.0 13.391600765745357 -5.897395340113822 5.113406373206029 0.9829070096676393 1.0504750738697008 0.32151185137679095 0.0404575662293862 0.17469981291908104 7.219940902485752 0.0052073589396223925 0.016979034854113072 1.2664984420363042e-06 5.897395340113822 0.06756806420206152 TTIPEEEEEEEEAAGVVVEEELFHQQGT(ph)PR ddPTM_A549_MK2206_60min_R1 1 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 P20700 P20700 LMNB1 Lamin-B1 1 TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR 126.56 6.8262e-22 3869600.0 1662.0 1858.4 1634.3 1272.0 3118.2 2013.7 1370.4 2025.6 2580.4 2433.2 2640.4 True False 1942.5049680012394 1952.9846221318137 1866.0683147849252 1583.6400571022493 2659.516910654561 2226.7883974141214 1619.3839412550778 2312.735003139831 1995.9435200520652 1883.5384300692087 1984.7158086672155 0.9787320479427623 0.9840122266387801 0.9402194040254231 0.7979177926565224 1.3399988547682757 1.1219683884663887 0.8159273656123761 1.1652726264587414 1.0056570876978046 0.9490217298838619 1.0 10.954716727406083 TTIPEEEEEEEEAAGVVVEEELFHQQGT(ph)PR ddPTM_A549_PD325901_60min_R1 1 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 P20700 P20700 LMNB1 Lamin-B1 1 TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR 317.17 4.1535999999999977e-224 47332000.0 2801.7 2302.7 2779.3 2745.2 2549.0 2491.1 3327.3 3128.2 2528.0 2792.8 2760.7 True False 3086.1265214974696 2496.7566103263534 2967.9200112885983 2914.764769198446 2369.9670335726146 2470.8133075215737 3453.9222222684207 3065.8055969745737 2421.756951356807 2616.4621313777707 2421.151401519186 1.2746524317153547 1.0312269644763759 1.225829995359371 1.2038754649418189 0.9788594930847964 1.0205116895916657 1.426561849912074 1.2662593487755 1.0002501082077069 1.0806685322264582 1.0 11.24147758266534 -8.78322256532409 24.43553496697056 1.0001180576712114 1.1723398951707178 0.21420778754964664 0.12600900311495142 171.88525481003958 192813.2813509148 0.021759270666422283 0.023175046023987338 1.647317964911686e-09 8.78322256532409 0.17222183749950637 TTIT(ph)TTTTSSSGLGSPMIVGSPR ddPTM_A549_PD325901_60min_R1 1 TTITTTTTSSSGLGSPMIVGSPR 23 0 A0A494C017;C9JJV6;C9JZL8;A0A499FIY8;C9JC07;Q96S97 A0A494C017 MYADM Myeloid-associated differentiation marker 1 T(0.014)T(0.014)IT(0.34)T(0.264)T(0.326)T(0.038)T(0.002)S(0.001)SSGLGSPMIVGSPR 109.08 1.8686000000000001e-10 4035000.0 1231.2 1054.0 1064.9 1397.2 1466.0 1335.7 1764.7 1429.9 1864.2 1609.3 1761.1 True False 1356.1905176384644 1142.8242790133213 1137.1705177639071 1483.5018707285699 1363.0332174254424 1324.822502049923 1831.856624180893 1401.3795227651506 1785.8541569301276 1507.6885233551438 1544.4958645327038 0.8780797338352134 0.7399335312296802 0.7362729443810876 0.9605088008295911 0.8825101113740024 0.8577701840922416 1.186054729084776 0.907337827796092 1.1562699505643856 0.9761687020193504 1.0 10.592920292742466 -7.272866465876809 0.9600291925808573 1.0696476681060498 0.7975383109784733 0.45980903866581824 0.10126739083435442 0.29626204802376693 0.5385167957381206 0.0172507247625743 0.03993794522762734 5.334989071447328e-08 7.272866465876809 -0.27210935712757656 TTITTT(ph)TTSSSGLGSPMIVGSPR ddPTM_A549_PD325901_60min_R1 1 TTITTTTTSSSGLGSPMIVGSPR 23 0 A0A494C017;C9JJV6;C9JZL8;A0A499FIY8;C9JC07;Q96S97 A0A494C017 MYADM Myeloid-associated differentiation marker 1 T(0.011)T(0.011)IT(0.026)T(0.306)T(0.489)T(0.078)T(0.078)S(0.002)SSGLGSPMIVGSPR 144.01 4.6038000000000006e-27 5364800.0 1068.3 1577.9 1620.2 1240.2 2101.0 1542.7 1410.3 1802.2 1756.0 1756.8 2019.8 True False 1176.753029559106 1710.8751706405321 1730.1565150540735 1316.8043373014407 1953.4330080565187 1530.1367626805552 1463.969738245772 1766.2537072014495 1682.2014266544918 1645.8753481826373 1771.3774045671198 0.6643152534999591 0.9658445265415515 0.9767294708587978 0.743378759323869 1.1027762931942156 0.8638118329473002 0.82645840150791 0.9971075066485211 0.9496572680205208 0.9291500184766374 1.0 10.790655905950466 -5.259931748840314 24.324858027358 0.9536314631304396 0.6643151174678916 0.3982760040971355 0.09343396112630994 59.87876107539759 965968.4742659512 0.011908529134766407 0.10394405480332132 5.496272432471215e-06 5.259931748840314 -0.28931634566254794 TTITTTTT(ph)SSSGLGSPMIVGSPR ddPTM_A549_PD325901_60min_R1 1 TTITTTTTSSSGLGSPMIVGSPR 23 0 A0A494C017;C9JJV6;C9JZL8;A0A499FIY8;C9JC07;Q96S97 A0A494C017 MYADM Myeloid-associated differentiation marker 1 TTITT(0.002)T(0.005)T(0.046)T(0.44)S(0.44)S(0.029)S(0.029)GLGS(0.005)PMIVGS(0.001)PR 124.18 4.4245e-16 7460700.0 970.13 998.23 1385.2 1257.5 1245.5 1357.7 1768.7 1069.9 1559.7 1379.6 1447.9 True False 1068.616883428041 1082.35434538849 1479.2080018842757 1335.1729190102901 1158.020376741739 1346.6433413440006 1836.0088463697773 1048.5600051796866 1494.1512330028545 1292.4918205559902 1269.8174789943228 0.8415515624138127 0.8523700163945601 1.1648981261903777 1.0514683732875751 0.9119581324859968 1.0605015001136406 1.4458840555761368 0.8257564748676567 1.176666141173455 1.0178563785242782 1.0 10.310405426483513 -5.747112947455217 24.38913870741021 1.0809493131687444 0.8469605002175937 0.24524664966398302 0.15223999313617623 173.19660058408093 294840.4631378536 0.01976921207646641 0.07578700975748767 1.7901402297037526e-06 5.747112947455217 -0.2339888129511507 TTITTTTTS(ph)SSGLGSPMIVGSPR ddPTM_A549_MK2206_60min_R1 2 TTITTTTTSSSGLGSPMIVGSPR 23 0 A0A494C017;C9JJV6;C9JZL8;A0A499FIY8;C9JC07;Q96S97 A0A494C017 MYADM Myeloid-associated differentiation marker 1 TTITTT(0.005)T(0.001)T(0.026)S(0.446)S(0.446)S(0.073)GLGS(0.002)PMIVGSPR;TTITTTT(0.002)T(0.026)S(0.306)S(0.306)S(0.306)GLGS(0.051)PMIVGS(0.002)PR 115.78 1.2820000000000001e-15 2057800.0 473.66 464.72 500.02 535.05 790.13 433.85 349.73 543.46 844.3 551.9 662.23 True False 553.6022281248296 488.3722630203917 570.9303547443908 666.1372740193069 673.9029236788821 479.75971903367764 413.27141402155473 620.497119276448 653.0673980700507 427.22540668880345 497.7800143817949 1.1121423362333291 0.981100584415614 1.146953148477532 1.3382161894277715 1.353816754808484 0.963798676468566 0.8302290210160538 1.2465287905281983 1.311959860182637 0.8582614696160211 1.0 8.959364497773295 -11.211106633783094 1.669908575772948 1.0001750846044837 1.1659783238859824 0.15792657352400297 0.16684852099978126 0.7223918832854194 3.6343913382564415 0.12876419215336055 0.026892685407638135 6.150258448076622e-12 11.211106633783094 0.16580323928149876 TTITTTTTS(ph)SSGLGSPMIVGSPR ddPTM_A549_PD325901_60min_R1 1 TTITTTTTSSSGLGSPMIVGSPR 23 0 A0A494C017;C9JJV6;C9JZL8;A0A499FIY8;C9JC07;Q96S97 A0A494C017 MYADM Myeloid-associated differentiation marker 1 TTITTTT(0.001)T(0.034)S(0.294)S(0.294)S(0.294)GLGS(0.074)PMIVGS(0.009)PR 120.53 7.4522e-16 6870300.0 937.93 1132.6 1350.4 1678.2 1938.1 884.87 1667.1 1704.4 1591.7 1399.8 1593.0 True False 1033.147963132428 1228.0481768600457 1442.0462646148749 1781.8586025312677 1801.9745420820273 877.663912097714 1730.5424027721235 1670.4044049240656 1524.8063842858512 1311.4163891086373 1397.0710988590065 0.7395099390261556 0.8790162346519068 1.032192467364474 1.2754244247028792 1.2898230759720868 0.6282170698502787 1.238693151827036 1.1956473842228155 1.0914307693654006 0.93868979909446 1.0 10.448189728001584 -5.612997334057179 2.708251596776507 1.0715084294546713 0.7541744305773942 0.26411755002494075 0.17925538922168913 0.28451365378674737 3.8732984079976682 0.023460032443429465 0.14173826149389473 2.4378257830631427e-06 5.612997334057179 -0.3173339988772771 TTKPPYPGS(ph)PVK ddPTM_A549_MK2206_60min_R1 1 TTKPPYPGSPVK 12 1 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 TTKPPYPGS(1)PVK 95.76700000000001 7.2007e-05 32998000.0 4791.7 4820.4 4477.4 5820.1 7389.2 5351.6 4935.1 4704.1 7715.8 7795.4 7655.7 True False 5600.42181418263 5065.737770406901 5112.362646159223 7246.0247612742205 6302.2584684140475 5917.902759895428 5831.743789030892 5370.92058070206 5968.183619600732 6034.4137258595665 5754.578403428874 0.9732114885854386 0.8802969418903867 0.8883991645874552 1.259175608235117 1.0951729260754945 1.0283816371967818 1.0134093899139578 0.9333299859989377 1.0371191773222832 1.048628292606797 1.0 12.490494521001802 TTKPPYPGS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 TTKPPYPGSPVK 12 1 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 TT(0.001)KPPYPGS(0.999)PVK;TTKPPYPGS(1)PVK 86.367 8.8576e-05 125789000.0 19831.6 18105.7 21897.6 17185.5 23073.0 19673.6 19278.7 20267.8 22517.6 21281.3 23337.0 True False 21844.889432747703 19631.530880959668 23383.70281696585 18247.009303897692 21452.432077528814 19513.38472436128 20012.36147820944 19863.542829218477 21571.26357906332 19937.59508611062 20466.696945431682 1.0673382955242148 0.9591939008674074 1.1425245059968148 0.891546366888017 1.0481628830839338 0.9534212958929268 0.9778012315111916 0.9705299727737536 1.0539689739178058 0.9741481558684456 1.0 14.320990668771882 -8.762984710342446 24.999574849450195 1.0254853464324931 1.0001401867160913 0.0 0.06620838611343874 129.30604453487774 2091837.5744347128 0.010290352043419793 0.011243821364450181 1.7258986524556552e-09 8.762984710342446 -0.025345159716401833 TTKPPYPGS(ph)PVKYR ddPTM_A549_MK2206_60min_R1 4 TTKPPYPGSPVKYR 14 2 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 TTKPPYPGS(1)PVKYR;T(0.003)T(0.003)KPPY(0.005)PGS(0.988)PVKY(0.001)R;TTKPPYPGS(1)PVKYR;T(0.001)T(0.001)KPPY(0.001)PGS(0.992)PVKY(0.005)R 116.29 7.558499999999999e-07 48345300.0 9993.4 12954.4 10736.0 9429.699999999999 15166.499999999998 11662.599999999999 11779.1 10645.699999999999 16943.4 16886.8 15745.300000000001 True False 11680.04160482766 13613.723627283875 12258.526236022115 11739.97692331532 12935.52794094106 12896.728590992665 13919.20999885996 12154.760576088916 13105.74695304998 13072.060151608042 11835.307461826962 0.9868811302536846 1.1502636218951583 1.0357590012393156 0.9919452419111953 1.0929608700629618 1.0896825986641379 1.176075065540487 1.026991534887649 1.1073431759437289 1.1044968788322604 1.0 13.530809564953731 -3.7306118926619156 16.60742990365182 1.0609954509762927 0.45801739480850756 0.0 0.06242945398612169 0.0 0.0 0.008255972830329049 0.0 0.00018594654244131833 3.7306118926619156 -0.6029780561677851 TTKPPYPGS(ph)PVKYR ddPTM_A549_PD325901_60min_R1 3 TTKPPYPGSPVKYR 14 2 Q96T17-2;Q96T17;Q96T17-5;Q96T17-4 Q96T17-2 MAP7D2 MAP7 domain-containing protein 2 1 TTKPPYPGS(1)PVKYR;T(0.001)T(0.001)KPPY(0.001)PGS(0.996)PVKY(0.002)R;TTKPPYPGS(1)PVKYR 116.29 7.558499999999999e-07 85745600.0 15358.9 14324.599999999999 13700.5 15105.2 16076.3 19105.9 17480.9 17453.4 17593.9 14903.3 18786.3 True False 16918.124221375412 15531.784314188066 14630.298317799256 16038.21389760178 14947.15614822419 18950.307884940947 18146.14521541553 17105.278245072583 16854.48956743535 13962.303094586905 16475.70419616758 1.0268528749933945 0.9427083740554726 0.8879922911703171 0.9734463368996656 0.9072241143842007 1.1501971423685178 1.101388140947354 1.0382122694974973 1.0229905421193397 0.8474480318622547 1.0 14.008052509038137 TTKS(ph)PSDSGYSYETIGK ddPTM_A549_MK2206_60min_R1 4 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.003)T(0.01)KS(0.668)PS(0.319)DS(0.001)GYSYETIGK;TTKS(0.497)PS(0.497)DS(0.005)GYSYETIGK;TTKS(0.95)PS(0.039)DS(0.01)GYS(0.001)YETIGK;T(0.002)T(0.003)KS(0.969)PS(0.026)DSGYSYETIGK 288.31 7.775999999999998e-118 1682683000.0 68671.2 74194.2 66390.5 61231.0 90895.4 71095.1 71296.6 71767.6 94665.8 98554.0 99417.5 True False 80261.21971035299 77970.36787094927 75805.6712064667 76232.59774876392 77524.80706840837 78618.33629289204 84250.2693418614 81940.87707905711 73224.14745021892 76290.58295127425 74729.39096658565 1.0740248070031888 1.043369507799318 1.0144023686793098 1.020115335649536 1.037407184317515 1.0520403722819751 1.1274047366388 1.0965013366119363 0.979857409556037 1.0208912713524811 1.0 16.1893881441474 -8.77820123449995 24.99940576813068 0.9904882144169792 1.0563512170881035 0.3740926812542542 0.03264068873749398 165.26789487839002 246487.08125872925 0.006055694787254835 0.006455197863947382 1.666474856569694e-09 8.77820123449995 0.06586300267112433 TTKS(ph)PSDSGYSYETIGK ddPTM_A549_PD325901_60min_R1 4 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)T(0.005)KS(0.989)PS(0.005)DSGYSYETIGK;T(0.001)T(0.002)KS(0.932)PS(0.065)DSGYSYETIGK;TTKS(0.983)PS(0.017)DS(0.001)GYSYETIGK;T(0.068)T(0.008)KS(0.92)PS(0.004)DSGYSYETIGK 260.65 3.849099999999999e-87 3178451000.0 34080.2 32172.0 35728.2 35180.0 40987.5 39251.0 37760.1 38131.9 43663.4 41835.5 44103.5 True False 37539.99681548279 34883.24734764381 38152.93050311997 37352.98870042303 38108.67939919873 38931.3528696276 39197.08126861958 37371.329340603166 41828.37914156365 39193.9993903089 38679.04909512129 0.9705511819373508 0.9018641399858959 0.9863978405801169 0.9657163134637268 0.9852537818466043 1.0065230087194188 1.0133930948567096 0.9661904885173852 1.0814221166269467 1.013313416623072 1.0 15.239264706871545 -7.090425965975397 0.6908593784174315 1.0344309914839542 0.941336038745209 0.39224668464316637 0.032536076163743655 0.5284166692267049 0.4697279968443429 0.007346025005867315 0.023936897263708814 8.120336642251024e-08 7.090425965975397 -0.09309495273874524 TTKSPS(ph)DSGYSYETIGK ddPTM_A549_MK2206_60min_R1 2 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.224)T(0.224)KS(0.199)PS(0.253)DS(0.1)GYSYETIGK;T(0.019)T(0.019)KS(0.086)PS(0.874)DS(0.003)GYSYETIGK 129.32 1.4492e-12 18412200.0 5421.6 5813.4 5633.9 5083.8 8286.8 6201.4 5256.1 5554.4 8645.3 7855.2 8134.1 True False 6336.633534606208 6109.277228960976 6432.87173631939 6329.331228220452 7067.822697457581 6857.628031843841 6211.065333939589 6341.753209636594 6687.153353707225 6080.704864326665 6114.178480260569 1.0363834740944884 0.9991983794199962 1.0521236429534584 1.0351891507018478 1.1559725840970823 1.1215943489355888 1.0158462586579402 1.0372208188084047 1.0937124873433917 0.9945252471706588 1.0 12.577942951513814 -5.844654687100766 7.697650148807201 1.055187829896925 1.017959895379659 0.08570966224828869 0.048377751369886625 0.46909544598346703 37.00318591691042 0.0072465202676407665 0.02280392496295144 1.4300305415174761e-06 5.844654687100766 -0.03722793451726614 TTKSPS(ph)DSGYSYETIGK ddPTM_A549_PD325901_60min_R1 1 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.019)T(0.019)KS(0.38)PS(0.548)DS(0.031)GY(0.002)S(0.003)YETIGK 90.464 1.6666e-06 9855400.0 3840.7 4093.5 4092.7 3866.5 4376.5 5050.2 4089.0 4700.3 5401.2 4588.0 5307.4 True False 4230.605036626099 4438.4736111395005 4370.455233404398 4105.32492354138 4069.1097381053587 5009.072845588473 4244.609132586658 4606.548829185984 5174.206347178953 4298.312897007019 4654.6234463805995 0.9089038211921924 0.953562336947111 0.9389492584631807 0.88198862288928 0.8742081470133676 1.076149962137859 0.9119124632707367 0.989671642024663 1.1116272684103754 0.9234501880811337 1.0 12.18444874481716 -7.983207411210883 1.0955804750872227 1.05047750698425 0.9221212394279927 0.11370456085855074 0.06903041660284163 0.3338516107923452 0.8006506636191636 0.011935902923679199 0.017881431942550055 1.0394236372916017e-08 7.983207411210883 -0.1283562675562573 TTKT(ph)PEDGDYSYEIIEK ddPTM_A549_MK2206_60min_R1 2 TTKTPEDGDYSYEIIEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TT(0.001)KT(0.999)PEDGDYSYEIIEK;T(0.009)T(0.009)KT(0.983)PEDGDYSYEIIEK 229.1 3.2988999999999995e-64 284660000.0 13605.900000000001 15728.3 14456.099999999999 13996.1 19893.3 15744.7 16553.9 15108.0 22071.0 20115.6 23836.0 True False 15902.24328768235 16528.803288999017 16506.19235474658 17425.145128308803 16967.02192249516 17410.793703513984 19561.529352847658 17249.60526630953 17071.953740144614 15571.471989109057 17916.8633598666 0.8875573234153833 0.9225277302735474 0.9212657384952831 0.9725555627856585 0.946986176190914 0.9717545618232374 1.0917943034976243 0.9627580966514645 0.9528427714856293 0.8690958722154923 1.0 14.129030471674382 -6.104514305344944 1.0127317171908738 0.9837582579445784 0.8908806232325062 0.21155337623960913 0.050495206480439814 0.5747970421997229 0.9111715907257663 0.00602836091392723 0.041701742768384724 7.861142966874302e-07 6.104514305344944 -0.09287763471207222 TTKT(ph)PEDGDYSYEIIEK ddPTM_A549_PD325901_60min_R1 2 TTKTPEDGDYSYEIIEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.117)T(0.117)KT(0.764)PEDGDYS(0.002)YEIIEK;T(0.037)T(0.194)KT(0.769)PEDGDYSYEIIEK 190.19 5.0525e-40 463870000.0 7426.0 7931.0 7574.900000000001 8629.9 8361.9 10789.8 8810.9 9641.6 9008.6 8874.2 9468.6 True False 8179.882053267734 8599.373203846924 8088.978265574064 9162.949323075067 7774.5889909889565 10701.93144614679 9146.203621009478 9449.29072431112 8629.999870250376 8313.881497519558 8304.022226400757 0.9850505971987469 1.035567219040812 0.9741036385785421 1.1034350671586048 0.9362437598338083 1.2887647882398994 1.1014184899374662 1.1379173208700286 1.0392553915394454 1.0011872886235125 1.0 13.01959458985538 -4.027365099524311 12.764356710398454 1.043713377682607 0.6329035553297337 0.0 0.09509003123132934 0.0 0.0 0.012070256053646602 0.0 9.389336427836773e-05 4.027365099524311 -0.41080982235287333 TTLCYMKR ddPTM_A549_MK2206_60min_R1 1 TTLCYMKR 8 1 J3QLL6 J3QLL6 KCTD1 0 34.808 0.048484 2590400.0 116.21 218.96 177.07 103.14 0.0 221.21 192.7 0.0 155.35 227.44 227.84 False True 135.82340693828158 230.10412874622347 202.1811885816353 128.40930463013055 0.0 244.61829537268613 227.71109565079803 0.0 120.1634730429734 176.0611460360598 171.26103993589552 0.7930782563805606 1.343587127769126 1.1805439734414402 0.7497870191503874 0.0 1.4283359219601193 1.3296141126787053 0.0 0.7016392816950756 1.0280280097677847 1.0 7.420053180752419 TTLTAAITK ddPTM_A549_PD325901_60min_R1 1 TTLTAAITK 9 0 P49411;H3BNU3 P49411 TUFM Elongation factor Tu, mitochondrial 0 90.15 0.0029636999999999997 2724700.0 2309.3 2224.1 2441.3 2453.5 3224.4 3108.8 2566.0 2608.9 3091.8 2805.4 3236.0 False True 2543.738435983193 2411.532712479629 2606.9812987294863 2605.047122697213 2997.9292675761253 3083.482963519357 2663.6505341690763 2556.8634428575433 2961.8623980241205 2628.266565227442 2837.9925146941287 0.8963161188102536 0.8497318791341272 0.9186004844027785 0.9179189547573483 1.0563555936296167 1.0865014433808986 0.9385685551944303 0.900940869159803 1.043647008471177 0.9261005980879796 1.0 11.470655068906252 -6.6201651315443675 5.013507627943291 1.0125398042646896 0.8893506535401571 0.37702764017101575 0.057619080254872494 0.12832443109521366 5.30894628174156 0.007837576588199557 0.01662972078179687 2.397920985523129e-07 6.6201651315443675 -0.12318915072453251 TTNES(ph)LLTSFPK ddPTM_A549_MK2206_60min_R1 1 TTNESLLTSFPK 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 T(0.14)T(0.14)NES(0.71)LLT(0.008)S(0.001)FPK 71.241 0.0026072 786290.0 1389.4 1585.1 1681.6 1886.0 2322.0 1354.3 1767.6 1691.8 2473.7 2618.1 2717.3 True False 1623.8967524313614 1665.774819490496 1920.0761660296937 2348.0700846657564 1980.4368759347997 1497.6111270884178 2088.750039815 1931.6178309202055 1913.410899687179 2026.66939165058 2042.5194163351875 0.7950459317273251 0.8155490744265875 0.9400528340997664 1.1495949883692202 0.96960492032346 0.7332175719413834 1.0226341170174833 0.9457035343076599 0.9367895768258286 0.9922399637634551 1.0 10.996134077460143 -5.777692226122678 4.598571872268894 0.9666405463766579 0.8014736585877187 0.31136015903787173 0.09265205951445052 0.16128847561651435 8.281200972649597 0.012543022688715792 0.04588013504983905 1.6684291686351738e-06 5.777692226122678 -0.16516688778893918 TTNESLLTS(ph)FPK ddPTM_A549_MK2206_60min_R1 2 TTNESLLTSFPK 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 TTNESLLT(0.023)S(0.977)FPK;TTNESLLT(0.018)S(0.982)FPK 84.365 0.00048682 4569800.0 3064.2 4454.0 3388.3999999999996 3319.6000000000004 5204.1 4500.5 3940.6000000000004 3936.0 5339.7 5581.1 5833.7 True False 3581.362047502645 4680.689575427837 3868.9260709889477 4132.902149022507 4438.583783829584 4976.739922809883 4656.556012047405 4493.940053494461 4130.26647574873 4320.325633757712 4385.031288070722 0.8167243999479723 1.0674244419102412 0.8823029567689026 0.9425023169768203 1.012212568677571 1.1349382925382714 1.0619208179233186 1.0248364853678513 0.9419012555246599 0.9852439697547795 1.0 12.098371421284988 -5.244272651594771 24.064459573406698 0.9904898372936177 0.8167241657889064 0.37594577136962093 0.06743634372119507 1868.8615423090077 2619716.724945652 0.009695481285795251 0.3660405532739221 5.698064334943201e-06 5.244272651594771 -0.17376567150471134 TTNESLLTS(ph)FPK ddPTM_A549_PD325901_60min_R1 1 TTNESLLTSFPK 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 TTNESLLT(0.138)S(0.862)FPK 80.469 0.00010487 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TTNNEKS(ph)PIIKPLIPK ddPTM_A549_PD325901_60min_R1 1 TTNNEKSPIIKPLIPK 16 2 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 T(0.054)T(0.054)NNEKS(0.892)PIIKPLIPK 80.752 5.6278999999999994e-05 26928000.0 4157.3 4038.4 4175.0 3884.9 4566.9 3900.3 3524.7 4304.1 4672.5 4636.2 4831.9 True False 4579.346035557495 4378.730140766031 4458.340606314504 4124.861449751946 4246.136698949697 3868.5372499403447 3658.834387289845 4218.251348998868 4476.131074056441 4343.46954078116 4237.606931937753 1.080644361100163 1.0333025717332744 1.0520892281710081 0.973394067926387 1.0020128735743887 0.9129061076392374 0.8634199551907827 0.9954324260721288 1.0562874626999954 1.0249816961657174 1.0 12.049034058393042 -6.236550409610731 20.837712935478457 1.0005078995067467 1.0531412345723936 0.21893758719034417 0.05401350927012845 168.1815806237401 140801.99363655405 0.008924074056499798 0.023583244986649026 5.800288432647733e-07 6.236550409610731 0.052633335065646936 TTNPFYNT(ph)M ddPTM_A549_PD325901_60min_R1 2 TTNPFYNTM 9 0 F5H527;Q76I76;A0A3B3IS79 F5H527 SSH2 Protein phosphatase Slingshot homolog 2 1 TTNPFY(0.006)NT(0.994)M;TTNPFY(0.001)NT(0.999)M 59.542 0.0042886 6502100.0 4830.0 4948.4 3790.3 5226.4 5136.3 4740.9 4370.1 4677.8 5110.700000000001 5429.9 6255.7 True False 5320.338044341929 5365.419034411313 4047.5325509254785 5549.222857984397 4775.544007273062 4702.291682240387 4536.406546910479 4584.497609336892 4895.91505193799 5087.055187327468 5486.2885581495875 0.9697517707920872 0.977968799406526 0.737754222736441 1.011471197544162 0.8704507531196563 0.8570988624459762 0.8268625499422356 0.8356282322275715 0.8923910946436404 0.9272307013036929 1.0 12.421614789178442 -10.368690822472884 0.892696207443241 0.9954641292202057 0.8851398901023306 0.10727850349207968 0.07680978384936894 0.5921197043410479 0.899461733608581 0.03812412709051266 0.013584437558373236 4.278673797775602e-11 10.368690822472884 -0.11032423911787503 TTNRAS(ph)DVR ddPTM_A549_MK2206_60min_R1 1 TTNRASDVR 9 1 Q8IZT6;Q8IZT6-2;Q5VYL4 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 T(0.099)T(0.099)NRAS(0.802)DVR 44.309 0.048761 3907800.0 430.41 453.05 590.86 380.97 592.0 604.34 537.46 395.08 618.17 794.72 706.64 True False 503.0526854858081 476.1083098669922 674.6528326952338 474.307667102393 504.91758421765775 668.290857671575 635.109525005075 451.0837998817558 478.15548201464316 615.1922000429893 531.1617857281478 0.9470799650923567 0.8963527171185987 1.2701456520829713 0.8929627090024636 0.9505909457049645 1.2581681808216731 1.1956988286241819 0.8492399340501945 0.9002068576133719 1.158201166899926 1.0 9.053007545940632 -8.275469898384296 24.836777650352683 0.9437860851253191 1.0577391296906324 0.049781361939293056 0.14808358084518602 1126.0400857267316 1993309.1475353462 0.022288244727920927 0.02701036077781605 5.3031034797785396e-09 8.275469898384296 0.1139530445653133 TTNRAS(ph)DVR ddPTM_A549_PD325901_60min_R1 2 TTNRASDVR 9 1 Q8IZT6;Q8IZT6-2;Q5VYL4 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 T(0.17)T(0.17)NRAS(0.66)DVR;TTNRAS(1)DVR 90.434 0.00088207 10001500.0 1387.9099999999999 1278.74 1529.6 1244.0 1285.65 1431.78 1181.45 1323.04 1426.23 1531.69 1401.35 True False 1528.80960147466 1386.5039075384204 1633.4078542320153 1320.8390546710148 1195.3503792517195 1420.120058385146 1226.410726264247 1296.6509292951991 1366.2905129484263 1434.9788320001485 1228.99283388956 1.2439532268355296 1.1281627274834174 1.3290621468170392 1.0747329180844583 0.9726259960919644 1.1555153286701436 0.9978990051413554 1.0550516598144128 1.1117156058789552 1.1676055322948278 1.0 10.2632607882147 -6.3988505695145435 7.139065633563609 1.0521115124872726 1.2224398606025684 0.49455664006553346 0.07406775133246547 0.13713434018193046 7.415389647918449 0.009189853807412532 0.021451720886876677 3.991622210400536e-07 6.3988505695145435 0.17032834811529574 TTNS(ph)SHANGAAQAPR ddPTM_A549_MK2206_60min_R1 1 TTNSSHANGAAQAPR 15 0 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 T(0.152)T(0.152)NS(0.543)S(0.152)HANGAAQAPR 63.46 0.0013743 2810900.0 229.74 318.71 385.74 316.62 321.67 215.33 179.77 276.39 321.1 252.62 375.27 True False 268.51449539627225 334.9309776795256 440.4437323289094 394.1919142136121 274.35276911367225 238.11607767551422 212.43188201942897 315.56912890887537 248.37136269133399 195.5529665477903 282.08010207489235 0.9519086721153468 1.187361232557273 1.5614136874212114 1.3974467228069636 0.9726058913607154 0.8441434752894919 0.7530906308415481 1.118721691419027 0.8804994073115845 0.6932533174419758 1.0 8.13996109160627 -6.825145673562483 6.962077481606566 0.9343129026711443 1.2882177374620478 0.5035840871754724 0.17865156903594667 0.13472158432046197 11.932925176530341 0.023933458415898386 0.04564180482378928 1.4957338642539367e-07 6.825145673562483 0.3539048347909035 TTNS(ph)SHANGAAQAPR ddPTM_A549_PD325901_60min_R1 2 TTNSSHANGAAQAPR 15 0 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 T(0.088)T(0.088)NS(0.623)S(0.202)HANGAAQAPR;T(0.169)T(0.169)NS(0.526)S(0.136)HANGAAQAPR 82.449 8.6789e-05 13469400.0 993.49 1008.82 820.15 611.8599999999999 1023.8199999999999 933.52 712.26 645.05 1071.15 1127.08 1130.1399999999999 True False 1094.3483734313172 1093.8368018540984 875.8103109625963 649.6532025651181 951.9104151872561 925.9177226275694 739.3654440636271 632.183971718064 1026.1332905244635 1055.9159764513233 991.1399445477209 1.1041310356336134 1.1036148909861971 0.8836394050915262 0.6554606200051489 0.960419787764314 0.9341947398256522 0.7459748223557027 0.6378352272004773 1.035306160516728 1.0653550815502257 1.0 9.952944963685807 TTPATGEQS(ph)PGAR ddPTM_A549_MK2206_60min_R1 4 TTPATGEQSPGAR 13 0 O00308-4;O00308-2;O00308 O00308-4 WWP2 NEDD4-like E3 ubiquitin-protein ligase WWP2 1 TTPAT(0.015)GEQS(0.984)PGAR;TTPATGEQS(1)PGAR;TTPATGEQS(1)PGAR;TTPATGEQS(1)PGAR 162.72 9.661700000000001e-19 212480000.0 4579.08 4943.7 3934.8900000000003 3445.29 5957.55 4293.8099999999995 4326.58 4705.23 6689.4 7263.8 7226.799999999999 True False 5351.9167562425455 5195.313213750023 4492.916570497494 4289.386204664946 5081.202286918761 4748.178124199599 5112.663581841358 5372.210761662536 5174.261580776736 5622.902535071807 5432.186110466685 0.9852233792083306 0.9563945542550066 0.8270917967704723 0.7896243091524785 0.9353881077690525 0.8740823726659243 0.9411797530261944 0.9889592610443539 0.9525192023165439 1.0351085954580332 1.0 12.407317192824957 -7.969653396754068 3.679819516200777 0.9776131076548417 0.8915708290864411 0.39616747386322415 0.05592372708338585 0.20203368427571441 5.880063017771052 0.008987819777892984 0.012387602145425076 1.0723748084160364e-08 7.969653396754068 -0.08604227856840052 TTPATGEQS(ph)PGAR ddPTM_A549_PD325901_60min_R1 4 TTPATGEQSPGAR 13 0 O00308-4;O00308-2;O00308 O00308-4 WWP2 NEDD4-like E3 ubiquitin-protein ligase WWP2 1 TTPATGEQS(1)PGAR;TTPATGEQS(1)PGAR;TTPATGEQS(1)PGAR;TTPATGEQS(1)PGAR 183.0 4.0983000000000002e-25 294809000.0 12477.800000000001 11170.099999999999 12015.600000000002 12293.4 13918.9 11906.8 12403.599999999999 13106.400000000001 13751.7 13181.900000000001 13406.4 True False 13744.537070329134 12111.443528469359 12831.050871672463 13052.735397662891 12941.284481598223 11809.834968486959 12875.625785510349 12844.982570228105 13173.763871824922 12349.592584362867 11757.497790171617 1.1690018842120073 1.030103832006978 1.0913079552009999 1.1101626919780494 1.10068355636147 1.0044513874677563 1.0950991456935166 1.0924928755645222 1.120456419123225 1.05035891179892 1.0 13.521293440590018 -10.903648680303238 1.12130556392 0.9993282112620547 1.0898287121197483 0.22542609429393945 0.04349024591518965 0.4051780391416052 0.8937706138489947 0.028856776140690925 0.006667199525054451 1.2483929852720675e-11 10.903648680303238 0.09050050085769357 TTPES(ph)PPYSSGSYDSIK ddPTM_A549_MK2206_60min_R1 1 TTPESPPYSSGSYDSIK 17 0 A0A087X0N3;Q96MY1;A0A087WTU5;Q96MY1-2 A0A087X0N3 NOL4L Nucleolar protein 4-like 1 T(0.014)T(0.014)PES(0.973)PPYSSGSYDSIK 169.09 9.3707e-30 42682000.0 7299.9 8197.9 5761.3 5876.7 10502.0 8078.7 6907.2 6516.2 10539.0 10415.0 10348.0 True False 8531.944654580167 8615.138093938001 6578.338972018837 7316.491763815085 8957.169711915278 8933.582671792954 8162.148831755023 7439.891305025558 8151.933327324729 8062.24426646836 7778.306009728959 1.0968898168712533 1.1075853898216848 0.845729001120652 0.9406279149552299 1.1515578971451905 1.1485254836488814 1.0493478684878121 0.9564924928024021 1.0480345356853336 1.0365038681152756 1.0 12.925240278245486 TTPES(ph)PPYSSGSYDSIK ddPTM_A549_PD325901_60min_R1 2 TTPESPPYSSGSYDSIK 17 0 A0A087X0N3;Q96MY1;A0A087WTU5;Q96MY1-2 A0A087X0N3 NOL4L Nucleolar protein 4-like 1 TTPES(1)PPYSSGSYDSIK;TT(0.002)PES(0.997)PPYSSGSYDSIK 190.19 1.2767e-39 73359000.0 6080.299999999999 6763.4 6073.4 6301.6 7212.4 7148.0 6782.8 6520.4 7018.5 7274.700000000001 8483.6 True False 6697.5675799197115 7333.375454154364 6485.5774463210755 6690.835520028027 6705.8259054292375 7089.7890579118475 7040.923165690574 6390.345506845157 6723.5368524912 6815.374200491933 7440.170981971296 0.9001900085561166 0.985646092263778 0.8716973658315984 0.8992851825906922 0.9012999730353655 0.9529067376397022 0.9463388923119963 0.8588976681221397 0.9036804219665633 0.9160238678662972 1.0 12.86112006083513 -10.683691397366031 0.9330099184929386 1.000351105047998 0.9139952592745447 0.01645019254942326 0.04226981748885038 0.41340692756583375 0.636816690113386 0.023888970039880608 0.006214391549088066 2.0716128805096016e-11 10.683691397366031 -0.08635584577345334 TTPES(ph)PPYSSGSYDSIKTEVSGCPEDLTVGR ddPTM_A549_MK2206_60min_R1 1 TTPESPPYSSGSYDSIKTEVSGCPEDLTVGR 31 1 A0A087X0N3;Q96MY1;A0A087WTU5;Q96MY1-2 A0A087X0N3 NOL4L Nucleolar protein 4-like 1 T(0.122)T(0.122)PES(0.653)PPY(0.015)S(0.022)S(0.022)GS(0.022)Y(0.015)DS(0.005)IKT(0.001)EVSGCPEDLTVGR 44.75 0.0080839 2528400.0 561.19 521.57 605.0 553.01 771.19 592.5 442.03 691.44 788.22 838.27 836.88 True False 655.9051522217902 548.1156851944093 690.79809731682 688.4974748255626 657.7489725892156 655.197956730331 522.3411292710031 789.453737446192 609.6894285286928 648.9042247962002 629.0595992870097 1.0426756907695358 0.8713255243472254 1.0981441155969736 1.0944868747030028 1.0456067649785854 1.0415514801347077 0.830352370209494 1.2549744703697019 0.969207733607004 1.0315464950088717 1.0 9.297052899283882 TTPES(ph)PPYSSGSYDSIKTEVSGCPEDLTVGR ddPTM_A549_PD325901_60min_R1 1 TTPESPPYSSGSYDSIKTEVSGCPEDLTVGR 31 1 A0A087X0N3;Q96MY1;A0A087WTU5;Q96MY1-2 A0A087X0N3 NOL4L Nucleolar protein 4-like 1 T(0.118)T(0.118)PES(0.724)PPY(0.015)S(0.016)S(0.003)GS(0.003)Y(0.002)DS(0.001)IKTEVSGCPEDLTVGR 60.216 0.00037569999999999997 5290400.0 938.86 784.64 663.77 1085.9 1143.5 1184.5 1190.0 1577.1 1290.8 853.96 1087.4 True False 1034.172376047798 850.7643664943191 708.8174237732643 1152.9735767421664 1063.1845048608413 1174.853824719723 1235.2861011929865 1545.6435032889847 1236.5521648779154 800.0408198622748 953.656693596538 1.0844283723816903 0.8921075814880722 0.7432626735938819 1.2090027621931136 1.1148503565273995 1.2319462890665416 1.2953152947884587 1.620754631795095 1.296642883315263 0.8389191049926681 1.0 9.897326194387015 -6.282249114518011 23.664843590713687 1.196750848931534 0.9051503560829071 0.3037839936172114 0.198366494147078 365.2884503920184 415405.96029526513 0.02794202939796393 0.0650134028090462 5.220966246164969e-07 6.282249114518011 -0.2916004928486269 TTPPPGAQCEVPAS(ph)PQRPSRPGALPEQTR ddPTM_A549_MK2206_60min_R1 2 TTPPPGAQCEVPASPQRPSRPGALPEQTR 29 2 D6R9H8;Q9H074 D6R9H8 PAIP1 Polyadenylate-binding protein-interacting protein 1 1 TTPPPGAQCEVPAS(0.964)PQRPS(0.036)RPGALPEQTR;TTPPPGAQCEVPAS(0.996)PQRPS(0.004)RPGALPEQTR 143.83 2.9501e-36 30228000.0 3553.6000000000004 3502.8999999999996 2952.8 2834.1000000000004 3499.9 3430.7 3389.6000000000004 2905.4 4994.0 4223.2 4877.9 True False 4153.360802821419 3681.1826479043943 3371.5514409208367 3528.4546272275843 2985.069346289496 3793.734396885648 4005.4464443069287 3317.249347414331 3862.8669737792666 3269.176186860217 3666.5828068087476 1.1327606716282905 1.0039818659130062 0.9195350599091761 0.9623278167004267 0.814128441541345 1.0346784995120752 1.0924194693950238 0.9047250593261624 1.053533269889889 0.8916138974931762 1.0 11.84022040650968 TTPPPGAQCEVPAS(ph)PQRPSRPGALPEQTR ddPTM_A549_PD325901_60min_R1 2 TTPPPGAQCEVPASPQRPSRPGALPEQTR 29 2 D6R9H8;Q9H074 D6R9H8 PAIP1 Polyadenylate-binding protein-interacting protein 1 1 TTPPPGAQCEVPAS(0.999)PQRPS(0.001)RPGALPEQTR;TTPPPGAQCEVPAS(0.999)PQRPS(0.001)RPGALPEQTR 152.82 3.4174999999999995e-37 47759000.0 5402.9 5335.0 4529.3 6220.0 5977.9 5931.4 4845.0 5739.8 5253.9 6395.5 6044.8 True False 5951.398430595239 5784.599173184127 4836.6855348934805 6604.195273355072 5558.032926635439 5883.0966449494 5029.379126285731 5625.315186214005 5033.0968539294045 5991.687038537139 5301.327921144336 1.1226240894961614 1.0911604147542475 0.9123535851465384 1.2457624526515803 1.0484227743141932 1.109740188205427 0.9487017594640887 1.0611143603808106 0.9494030418029618 1.130223809517481 1.0 12.372138067977282 -7.758528477549867 24.99923258784908 0.9813594863916337 1.0858131764442558 0.07052673776418217 0.09044477504318296 70.45379729667911 605063.9429953042 0.011382006283166527 0.016479170005339383 1.7436990159169253e-08 7.758528477549867 0.10445369005262206 TTPPPGAQCEVPAS(ph)PQRPSRPGALPEQTRPLR ddPTM_A549_MK2206_60min_R1 6 TTPPPGAQCEVPASPQRPSRPGALPEQTRPLR 32 3 D6R9H8;Q9H074 D6R9H8 PAIP1 Polyadenylate-binding protein-interacting protein 1 1 TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTRPLR;TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTRPLR;TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTRPLR;TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTRPLR;TTPPPGAQCEVPAS(0.929)PQRPS(0.032)RPGALPEQT(0.039)RPLR;TTPPPGAQCEVPAS(0.957)PQRPS(0.035)RPGALPEQT(0.008)RPLR 197.63 1.0682999999999998e-88 311325500.0 7573.39 8709.19 8861.02 6925.25 11013.169999999998 8256.54 8355.07 8854.74 12437.15 11691.95 12905.979999999998 True False 8851.59308039164 9152.450571041842 10117.645878159154 8621.936560886288 9393.147282058078 9130.241582552311 9873.07806922217 10109.926511503949 9620.155383047419 9050.73037458807 9701.06897907246 0.9124348151205457 0.9434476335325396 1.0429413397621798 0.8887614941699601 0.9682589931399682 0.9411582993841647 1.017730941870507 1.0421456164587113 0.9916593113398543 0.9329621708816497 1.0 13.243928014006592 -7.757467100418769 24.988931681275464 1.0016282482993217 0.9515644139993671 0.2219657936361974 0.04368895315905611 97.4245364318927 612878.1314853162 0.0056717928842298145 0.008240105056974029 1.7479656729435384e-08 7.757467100418769 -0.050063834299954646 TTPPPGAQCEVPAS(ph)PQRPSRPGALPEQTRPLR ddPTM_A549_PD325901_60min_R1 7 TTPPPGAQCEVPASPQRPSRPGALPEQTRPLR 32 3 D6R9H8;Q9H074 D6R9H8 PAIP1 Polyadenylate-binding protein-interacting protein 1 1 TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTRPLR;TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTRPLR;TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTRPLR;TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTRPLR;TTPPPGAQCEVPAS(0.931)PQRPS(0.055)RPGALPEQT(0.014)RPLR;TTPPPGAQCEVPAS(0.875)PQRPS(0.059)RPGALPEQT(0.066)RPLR;TTPPPGAQCEVPAS(0.962)PQRPS(0.032)RPGALPEQT(0.006)RPLR 224.34 3.0527999999999996e-115 417504300.0 15700.589999999998 17177.48 15664.799999999997 16071.85 15673.130000000001 17302.0 15365.47 18360.1 14845.529999999999 16929.89 19538.260000000002 True False 17294.502338636532 18625.08652397129 16727.90752809472 17064.571672680344 14572.303418163196 17161.098248459824 15950.211369157816 17993.893402280195 14221.62400082121 15860.933856126889 17135.17788323478 1.0092980917086152 1.0869502873497596 0.976231915541505 0.99587945855972 0.8504319895284469 1.0015126989285827 0.9308459753291299 1.050114187602662 0.8299665225381628 0.9256357864627349 1.0 14.064673548350138 -6.1895181687625405 1.9115362847032673 0.9316526350363449 1.0450075796524236 0.22819768677316843 0.06576026125759471 0.37845848383445013 2.623658882830587 0.01107926491859326 0.03970793730745199 6.46370952426382e-07 6.1895181687625405 0.11335494461607876 TTPPTQKPPS(ph)PPMSGK ddPTM_A549_MK2206_60min_R1 8 TTPPTQKPPSPPMSGK 16 1 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7 H7C3Q7 ABI2 Abl interactor 2 1 TTPPTQKPPS(0.99)PPMS(0.01)GK;TTPPTQKPPS(0.993)PPMS(0.007)GK;TT(0.001)PPT(0.01)QKPPS(0.915)PPMS(0.074)GK;TTPPT(0.001)QKPPS(0.708)PPMS(0.291)GK;TTPPT(0.001)QKPPS(0.988)PPMS(0.01)GK;TTPPTQKPPS(0.998)PPMS(0.002)GK;T(0.011)T(0.011)PPT(0.008)QKPPS(0.97)PPMS(0.001)GK;TTPPT(0.002)QKPPS(0.994)PPMS(0.004)GK 140.97 9.464200000000001e-15 248288000.0 31714.7 36419.899999999994 34176.700000000004 29953.600000000002 44896.90000000001 36261.1 33984.8 35168.100000000006 48344.0 50119.30000000001 49315.1 True False 37067.36601002944 38273.51734802972 39023.469971186394 37292.233344668224 38292.62548456382 40098.225533829864 40159.398253623476 40153.28587278927 37394.16118950437 38797.31532063443 37068.79964248014 0.9999613250910596 1.0324995067865377 1.0527308773836377 1.0060275407982737 1.033014984404329 1.0817244129987436 1.083374661196247 1.0832097683242585 1.0087772344980757 1.0466299339289489 1.0 15.177917778281389 -8.917422882477798 10.683836004987342 1.0038647744977787 1.0468999464349915 0.09945202600096514 0.030171472724372265 0.36401213581582376 44.767455401629 0.005056831303622192 0.005378171991074072 1.209419920157667e-09 8.917422882477798 0.043035171937212846 TTPPTQKPPS(ph)PPMSGK ddPTM_A549_PD325901_60min_R1 5 TTPPTQKPPSPPMSGK 16 1 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7 H7C3Q7 ABI2 Abl interactor 2 1 TTPPTQKPPS(0.936)PPMS(0.064)GK;TTPPTQKPPS(0.992)PPMS(0.007)GK;TTPPT(0.001)QKPPS(0.997)PPMS(0.003)GK;TTPPTQKPPS(1)PPMSGK;TTPPTQKPPS(0.999)PPMS(0.001)GK 135.04 6.9896e-11 427723900.0 54551.61 54519.9 53927.810000000005 51961.670000000006 60792.3 58077.3 56117.4 59206.59999999999 59029.299999999996 61480.9 66266.2 True False 60089.64928842723 59114.483310605705 57587.67548086549 55171.2243423852 56522.458570049625 57604.33772426748 58252.97836561956 58025.67791632078 56548.50380092024 57598.98548160398 58115.87749605193 1.0339626944892881 1.0171830118993146 0.9909112270528424 0.9493313483244441 0.9725820379101984 0.9911979343025631 1.0023590948889474 0.9984479356826838 0.9730301982407791 0.9911058382542178 1.0 15.826644747232123 -5.670963201896215 3.1655198611316564 0.9856178821121097 1.0307296982565834 0.5381241644808208 0.014722443695919511 0.1604702575879253 3.0681573000085955 0.002311634676150833 0.011302561790831757 2.1332256553314327e-06 5.670963201896215 0.04511181614447379 TTPS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 TTPSPGR 7 0 Q14686 Q14686 NCOA6 Nuclear receptor coactivator 6 1 T(0.008)T(0.021)PS(0.971)PGR 62.338 0.027355 8979900.0 4386.2 4487.2 3985.5 4319.7 5190.4 4291.6 3660.4 3887.5 4301.5 5304.5 5262.5 True False 4831.4837950502215 4865.352091829767 4255.979996758431 4586.518058249501 4825.844209907929 4256.650632475446 3799.698525047736 3809.9607628152457 4120.722913869189 4969.572964728368 4615.245861736048 1.0468529607722425 1.0541913123561397 0.9221567223631122 0.9937754554476236 1.045631013922336 0.9223020311369253 0.8232927646499119 0.8255163163468197 0.8928501400181438 1.0767731803694285 1.0 12.172191789317395 -7.277508242357274 23.07705394075223 0.9256967626172673 1.00877476919054 0.2560831479983857 0.075412106246173 345.1207245456492 495639.2762375328 0.011196310763366447 0.01794410365924514 5.2782718919733924e-08 7.277508242357274 0.08307800657327269 TTPSDLDSTGNSLNEPEEPSEIPERRDS(ph)GVGASLTR ddPTM_A549_MK2206_60min_R1 2 TTPSDLDSTGNSLNEPEEPSEIPERRDSGVGASLTR 36 2 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 1 TTPSDLDSTGNSLNEPEEPS(0.151)EIPERRDS(0.462)GVGAS(0.193)LT(0.193)R;TTPSDLDSTGNSLNEPEEPS(0.092)EIPERRDS(0.725)GVGAS(0.092)LT(0.092)R 93.177 1.1162000000000001e-09 8210000.0 947.8 1034.0500000000002 800.9300000000001 821.87 1276.31 1055.4099999999999 857.27 741.74 1396.3600000000001 1259.33 1599.44 True False 1107.7654685147859 1086.6787282153468 914.5139174941497 1023.2281868951458 1088.5664897176337 1167.092785675541 1013.0248623173819 846.8839164834809 1080.0866895287177 974.8464783573299 1202.2549057016704 0.9214064864790568 0.9038671608340246 0.7606655736292572 0.851090881012426 0.9054373449050849 0.9707531906425387 0.8426040580189204 0.7044129431014592 0.8983840984190854 0.8108484097125656 1.0 10.231527097685463 -9.89841088339665 1.0651253076092773 0.9849018864300769 0.8611180009592627 0.0 0.08878846483317565 0.3927744326273943 0.9054890776276402 0.024580993975068535 0.014400649899016939 1.2635403538717397e-10 9.89841088339665 -0.1237838854708142 TTPSDLDSTGNSLNEPEEPSEIPERRDS(ph)GVGASLTR ddPTM_A549_PD325901_60min_R1 1 TTPSDLDSTGNSLNEPEEPSEIPERRDSGVGASLTR 36 2 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 1 TTPSDLDSTGNSLNEPEEPS(0.134)EIPERRDS(0.577)GVGAS(0.144)LT(0.144)R 98.245 3.1413e-10 5766400.0 907.26 886.9 899.52 1083.0 1110.6 738.86 1111.8 1089.6 1086.7 1088.8 1014.8 True False 999.3643673104878 961.6421755758208 960.5668364531795 1149.8944503285431 1032.5952873620035 732.842969128252 1154.1101574003048 1067.8670732253356 1041.0297781010458 1020.0529821842296 889.9860333472195 1.1228989330898806 1.080513782850169 1.0793055176838078 1.2920365120830193 1.1602376314585898 0.8234319884459809 1.2967733359362055 1.1998694734670263 1.1697147360681086 1.1461449325758866 1.0 9.797638885652852 -10.795957798996584 1.0744163294304434 1.0009815607942665 1.1369898463215542 0.0 0.1277845516287732 0.7872446797681965 1.631681386837953 0.0789313702976523 0.020358129086351623 1.599713467461873e-11 10.795957798996584 0.13600828552728772 TTPSDLDSTGNSLNEPEEPSEIPERRDSGVGAS(ph)LTR ddPTM_A549_PD325901_60min_R1 1 TTPSDLDSTGNSLNEPEEPSEIPERRDSGVGASLTR 36 2 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 1 TTPSDLDSTGNSLNEPEEPS(0.001)EIPERRDS(0.192)GVGAS(0.404)LT(0.404)R 146.06 3.1903999999999996e-40 7057800.0 947.1 654.9 1090.7 852.05 793.09 867.02 916.05 861.32 836.66 1170.7 1203.3 True False 1043.24889478183 710.0907213717496 1164.7214609119112 904.6791933540492 737.3860944119675 859.9592765795649 950.9107840317938 844.1402969075316 801.498089763523 1096.781802207088 1055.3017283471704 0.9885787796593323 0.6728793313774862 1.1036857323602753 0.8572706450229846 0.6987443255369938 0.8148942179090772 0.9010795287155691 0.7999042114994325 0.7594966143179178 1.0393063639959013 1.0 10.043439833124577 -10.976353338625893 1.257286836809721 0.999643733070346 0.8341174085335075 0.23556819439804377 0.11886591357926486 0.561226107762905 1.5835786813444845 0.07891681343201884 0.018352679835253276 1.0559580403515936e-11 10.976353338625893 -0.16552632453683858 TTPSYVAFTDTER ddPTM_A549_MK2206_60min_R1 3 TTPSYVAFTDTER 13 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25;E9PI65;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;Q53FA3;P34931;P17066;P48741 P11142;P54652;A0A0G2JIW1 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L;HSPA6;HSPA7 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ;; 236.69 5.4734e-56 50252300.0 21694.0 24395.8 21563.6 18163.8 27792.1 20691.4 20958.9 21833.9 30453.3 29612.6 32232.5 False True 25355.416832622675 25637.44201711324 24621.642729423114 22613.931815403976 23703.91890597224 22880.950214160282 24766.860833604096 24928.9221885144 23555.676173927128 22923.09309315609 24228.280678255596 1.046521508039927 1.0581618381250775 1.0162356568504076 0.9333692355520519 0.9783574501531196 0.9443901743591523 1.0222294005299297 1.028918333891006 0.972238867740536 0.946129582926993 1.0 14.56440440939182 -5.9759700827360875 5.495093375866336 0.9852717039840421 1.0500212105558764 0.47703362269524996 0.029700658846467325 0.11366399875347198 10.124476924987345 0.003863467756097223 0.012050106789115915 1.0568903127575138e-06 5.9759700827360875 0.06474950657183431 TTPSYVAFTDTER ddPTM_A549_PD325901_60min_R1 2 TTPSYVAFTDTER 13 0 P11142;E9PKE3;P11142-2;E9PNE6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25;E9PI65;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;Q53FA3;P34931;P17066;P48741 P11142;P54652;A0A0G2JIW1 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA1L;HSPA6;HSPA7 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ; 286.86 1.2651999999999996e-98 86804000.0 29647.0 30506.0 31109.0 29657.0 35312.0 31625.0 30345.0 31249.0 33389.0 35873.0 37860.0 False True 32656.741615032126 33076.84768081631 33220.24381361385 31488.845534066146 32831.806939786664 31367.456485235336 31499.79558042115 30625.714180633724 31985.77644337519 33607.97265787551 33203.460014313874 0.9835342943462501 0.9961867729012885 1.0005054834433744 0.9483603672777305 0.9888067968107241 0.9447044516358523 0.9486901535816363 0.9223651440973654 0.9633266060099235 1.012182846106618 1.0 15.019045967067342 -3.8088038865074614 18.054001344255887 0.9748376245619015 0.976266406187433 0.0 0.02794770102709004 0.0 0.0 0.0037369019058762594 0.0 0.00015530881765625973 3.8088038865074614 0.0014287816255315056 TTQPSINES(ph)ESDPFEVVRDDFK ddPTM_A549_MK2206_60min_R1 1 TTQPSINESESDPFEVVRDDFK 22 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4;F5GWN9 F8WE42 NOL8 Nucleolar protein 8 1 TTQPS(0.002)INES(0.499)ES(0.499)DPFEVVRDDFK 67.832 0.00021483 3637700.0 683.18 826.79 822.87 617.34 1124.3 984.82 871.31 948.35 1375.5 1080.7 1527.4 True False 798.484081852639 868.8700794943827 939.5653394034572 768.5883277134459 958.9169593512039 1089.0329987293917 1029.615748580679 1082.7815167000688 1063.9514462221423 836.5691194212537 1148.1044259045239 0.6954803620964708 0.7567866301097578 0.8183622658393891 0.6694411330292717 0.835217544428269 0.9485487331619741 0.8967962541991819 0.9431036866241579 0.9267026780982206 0.7286524644848139 1.0 10.165038153054594 -7.09948213887951 2.938098409782471 0.95642607993935 0.7422631200230717 0.4328133786504307 0.08140095467290046 0.08218929137235056 1.3722674349970398 0.0071052038080895805 0.01318550978897447 7.952759719767461e-08 7.09948213887951 -0.21416295991627832 TTQPSINES(ph)ESDPFEVVRDDFK ddPTM_A549_PD325901_60min_R1 3 TTQPSINESESDPFEVVRDDFK 22 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4;F5GWN9 F8WE42 NOL8 Nucleolar protein 8 1 TTQPS(0.001)INES(0.499)ES(0.499)DPFEVVRDDFK;T(0.001)T(0.001)QPS(0.184)INES(0.774)ES(0.04)DPFEVVRDDFK;TTQPS(0.008)INES(0.496)ES(0.496)DPFEVVRDDFK 67.832 0.00021483 20720500.0 3380.71 3889.8300000000004 3697.85 4047.71 4637.9400000000005 3797.4300000000003 4443.9800000000005 4447.360000000001 4428.599999999999 4985.07 4773.51 True False 3723.917190452836 4217.639625459574 3948.8083379784653 4297.727853683611 4312.187094424393 3766.5049891139024 4613.098090739165 4358.6539159135755 4242.481342871343 4670.3118294426295 4186.398531773043 0.8895276362701344 1.0074625226073017 0.9432471151536659 1.026593101699617 1.0300469632063614 0.8997005326959865 1.101925212262437 1.0411464371662624 1.0133964338733292 1.1155917894574259 1.0 12.03149394275465 -3.930219903938711 0.8529869864283595 1.0102069144356756 1.7686077605998769e-13 0.27671170696011405 0.058667495351587745 16.112019924917618 1.444338983032823 0.006979906635706145 25.548155101424804 0.00011743027990525068 3.930219903938711 -1.0102069144354986 TTQPSINESES(ph)DPFEVVRDDFK ddPTM_A549_MK2206_60min_R1 1 TTQPSINESESDPFEVVRDDFK 22 1 F8WE42;F5H101;Q76FK4-2;Q76FK4-4;Q76FK4;F5GWN9 F8WE42 NOL8 Nucleolar protein 8 1 TTQPS(0.002)INES(0.18)ES(0.817)DPFEVVRDDFK 81.888 2.2985e-05 3275200.0 1892.5 2425.8 1984.2 1885.3 3201.6 2704.0 1811.2 2161.5 3382.6 2868.9 3085.3 True False 2211.9077328172953 2549.2628585704647 2265.589396191792 2347.1985846343327 2730.6488811338754 2990.1354852300656 2140.27159544746 2467.8992443161287 2616.4465009022315 2220.8134974624177 2319.134860051873 0.9537641690952895 1.0992301062273904 0.976911448841365 1.0121009455145837 1.1774429025972202 1.2893323009094797 0.9228750049488661 1.0641464999844503 1.1281993755394235 0.9576042927545593 1.0 11.17937100126996 -4.0346734284619155 1.0078246731232465 1.070796971676085 7.665052288104505e-09 0.07184367621952026 0.10286678614626442 39.32443486433463 4.381711031559814 0.014969407716476486 79.55545599341175 9.232654237125771e-05 4.0346734284619155 -1.0707969640110326 TTQSMQDFPVVDS(ph)EEEAEEEFQK ddPTM_A549_MK2206_60min_R1 3 TTQSMQDFPVVDSEEEAEEEFQK 23 0 Q9UBB9 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 TTQSMQDFPVVDS(1)EEEAEEEFQK;TTQSMQDFPVVDS(1)EEEAEEEFQK;T(0.006)T(0.006)QS(0.006)MQDFPVVDS(0.982)EEEAEEEFQK 108.08 5.2382e-11 14364600.0 3324.65 3906.52 3366.2200000000003 3516.8 4960.09 4413.95 3530.1499999999996 4127.86 6290.9 5409.1 5475.81 True False 3885.769640111504 4105.345181903985 3843.6006134707864 4378.416157875149 4230.467331591493 4881.031259257118 4171.532559998259 4712.996796041067 4866.021194502998 4187.1805532169 4116.015252332235 0.94406104008233 0.9974076698519996 0.9338159306608275 1.0637511985394688 1.0278065245735926 1.1858632585220394 1.013488120005038 1.1450387102843138 1.1822165118911527 1.0172898535408346 1.0 12.007032612963771 -6.498688085612248 1.863004805482665 1.0922630641971873 0.9609253464942819 0.3950994045691373 0.06545270061368474 0.30686757564097067 2.09112715736868 0.01131930088809754 0.031789853227255256 3.17184469391772e-07 6.498688085612248 -0.13133771770290548 TTQSMQDFPVVDS(ph)EEEAEEEFQK ddPTM_A549_PD325901_60min_R1 3 TTQSMQDFPVVDSEEEAEEEFQK 23 0 Q9UBB9 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 T(0.009)T(0.009)QS(0.038)MQDFPVVDS(0.943)EEEAEEEFQK;TTQSMQDFPVVDS(1)EEEAEEEFQK;TTQSMQDFPVVDS(1)EEEAEEEFQK 180.09 5.5787e-42 18587200.0 3224.17 4139.7 3044.6 2926.6000000000004 3839.3999999999996 2703.22 3228.6 3526.4 3542.8 3286.1400000000003 4146.5 True False 3551.485364891495 4488.567047278412 3251.2248646670987 3107.369435209155 3569.7337892109445 2681.2058725697343 3351.46613975771 3456.063185592715 3393.908436418868 3078.6525595838407 3636.506786829174 0.976620029351901 1.2343073477919138 0.8940516422085331 0.8544929563897786 0.9816381484945744 0.7373025900242008 0.921616907713789 0.9503799630211069 0.9332880798438333 0.8465961264624092 1.0 11.828337553472652 -5.780886060524055 24.99999359960578 0.9377177026112581 1.1054637798521116 0.3676682754350794 0.09378464860771746 170.34092290560307 218985.04655842434 0.012316977081708798 0.038373394428692725 1.6562044205478686e-06 5.780886060524055 0.16774607724085355 TTRT(ph)PDTSTYCYETAEK ddPTM_A549_MK2206_60min_R1 4 TTRTPDTSTYCYETAEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.008)T(0.046)RT(0.945)PDTSTYCYETAEK;T(0.017)T(0.017)RT(0.965)PDT(0.001)STYCYETAEK;T(0.001)T(0.001)RT(0.998)PDTSTYCYETAEK;T(0.002)T(0.002)RT(0.996)PDTSTYCYETAEK 254.11 1.5231999999999997e-86 440167000.0 23671.3 26620.399999999998 22409.1 23393.6 29530.8 23485.3 25024.600000000002 21169.799999999996 32841.8 35028.9 35198.3 True False 27666.43673227901 27975.264655078412 25587.04734311132 29125.033050178623 25186.858439214204 25970.49885771955 29571.245896330864 24170.68397979344 25403.184737577878 27115.84716137238 26457.59068633969 1.0456899519034233 1.057362515987607 0.9670966508799368 1.1008195491215367 0.951970976413148 0.9815897133493857 1.1176847599958821 0.9135633046236897 0.9601473179753207 1.024879683219703 1.0 14.691394070677436 -7.207564160113917 0.6456905925885286 0.9802181991356052 1.0398855043737965 0.0684191355436451 0.05926442567777035 1.2575991744901565 0.9880212005865274 0.011319434055864776 0.034678511870319915 6.200630324193003e-08 7.207564160113917 0.059667305238191304 TTRT(ph)PDTSTYCYETAEK ddPTM_A549_PD325901_60min_R1 4 TTRTPDTSTYCYETAEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.11)T(0.11)RT(0.778)PDT(0.002)STYCYETAEK;T(0.133)T(0.084)RT(0.442)PDT(0.264)S(0.067)T(0.01)YCYETAEK;T(0.004)T(0.02)RT(0.976)PDTSTYCYETAEK;T(0.002)T(0.002)RT(0.99)PDT(0.004)S(0.001)TYCYETAEK 273.26 5.589399999999998e-101 928141000.0 24020.4 25297.2 24063.100000000002 23846.600000000002 22204.1 26389.600000000002 24883.4 26422.8 20312.7 24851.8 28080.3 True False 26458.933325116133 27429.08382453112 25696.16666917521 25319.550322441955 20644.56061598655 26174.691847044 25830.35140371894 25895.77652571441 19459.027858317022 23282.653106765272 24626.601115687743 1.0744045920434042 1.1137990052170914 1.0434313102511792 1.028138239763537 0.8383032850942416 1.0628625413667048 1.0488800822483124 1.0515367672568574 0.7901629529347088 0.9454269794435277 1.0 14.587929904994418 -8.731705566660033 24.916473437345637 0.900910250942727 1.0306494328515963 0.3043974000290216 0.08082918657988565 196.47343397722776 164641.59066758514 0.016758513790003156 0.01900107654519069 1.8547886657352644e-09 8.731705566660033 0.12973918190886924 TTRT(ph)PEEGGYSYDISEK ddPTM_A549_MK2206_60min_R1 4 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.004)T(0.015)RT(0.981)PEEGGYSYDISEK;T(0.007)T(0.007)RT(0.986)PEEGGYSYDISEK;T(0.043)T(0.007)RT(0.951)PEEGGYSYDISEK;T(0.003)T(0.003)RT(0.994)PEEGGYSYDISEK 250.66 2.2291999999999995e-86 1126456000.0 49224.100000000006 53727.600000000006 48744.8 46735.100000000006 70400.5 52980.9 52274.799999999996 54916.6 78697.5 76352.0 82619.2 True False 57531.9246662995 56462.10535086589 55657.54561006435 58185.20159801837 60044.679708978394 58587.303672124865 61772.454504028734 62701.19622503403 60872.641904083684 59104.03017123308 62102.572466080244 0.9264016349358606 0.9091749843648568 0.896219647591312 0.93692095653201 0.9668630030064238 0.9433957619730586 0.9946843109883763 1.009639274754371 0.9801951752857205 0.9517162949009087 1.0 15.922365409785701 -7.023124592132441 0.9396334629207138 0.9923749638672446 0.9089106154671494 0.7031844008382517 0.019572155362736276 0.16654656845095575 0.2848727105122107 0.0026749148223705835 0.007476733413772158 9.481464162557673e-08 7.023124592132441 -0.0834643484000952 TTRT(ph)PEEGGYSYDISEK ddPTM_A549_PD325901_60min_R1 3 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.161)T(0.161)RT(0.678)PEEGGYSYDISEK;T(0.002)T(0.005)RT(0.993)PEEGGYSYDISEK;T(0.035)T(0.004)RT(0.961)PEEGGYSYDISEK 277.12 1.0242999999999998e-115 1914596000.0 50165.2 51168.2 55573.9 51038.2 59240.5 57480.9 54861.7 56904.9 55464.8 57852.0 60196.2 True False 55257.93417433164 55480.3237888135 59345.479047008754 54190.71369783776 55079.65164863027 57012.794608131655 56949.49201497416 55769.887128469556 53133.807340037594 54199.21484691592 52792.44901515164 1.0467014735094482 1.0509140004641655 1.1241281689731115 1.0264860734588164 1.0433244275677038 1.0799422203688402 1.0787431361373183 1.056398939031288 1.0064660445054934 1.0266471030991675 1.0 15.688043973007542 -8.742397533477233 4.105387161355394 1.0027291718918612 1.0646415814980204 0.45490169389291757 0.025184091591769136 0.10779123116267304 4.026194972637971 0.004103337722238748 0.004521788824817143 1.8096828326334774e-09 8.742397533477233 0.06191240960615918 TTRT(ph)SDVGGYYYEK ddPTM_A549_MK2206_60min_R1 1 TTRTSDVGGYYYEK 14 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.016)T(0.016)RT(0.597)S(0.371)DVGGYYYEK 131.09 3.5914000000000002e-09 94562000.0 7286.0 8591.5 7646.2 6778.9 9323.6 7847.6 7381.5 7597.4 10270.0 11649.0 11408.0 True False 8515.698674402543 9028.770652736483 8730.546135047714 8439.730804316388 7952.110790898235 8678.02782318472 8722.623002316379 8674.354716061693 7943.861397819992 9017.482809418132 8575.078755217244 0.9930752728330836 1.052908190171805 1.018130140173451 0.9842161273657682 0.9273513419407392 1.0120056119490262 1.01720616816602 1.0115772651981823 0.9263893224288806 1.0515918356938379 1.0 13.065934206004634 -6.282985524659166 4.040079391131631 0.9729859123425857 1.0253467345432132 0.0 0.04044164388877995 0.230426699309771 8.73605618803011 0.0054516928631518575 0.014018553229193853 5.212120831812435e-07 6.282985524659166 0.052360822200627544 TTRTS(ph)DVGGYYYEK ddPTM_A549_MK2206_60min_R1 1 TTRTSDVGGYYYEK 14 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)T(0.003)RT(0.408)S(0.588)DVGGYYYEK 132.09 2.2615e-09 104360000.0 6893.4 7548.0 6540.8 6194.8 9681.7 6521.9 7211.2 6402.0 10388.0 10472.0 10878.0 True False 8056.837392550981 7932.160959885348 7468.383793272495 7712.526278095143 8257.53475527044 7212.043129113153 8521.38169671528 7309.503105302729 8035.134586227279 8106.367926880138 8176.692382473103 0.9853418736677642 0.9700940904769865 0.9133746806081539 0.9432330234933494 1.0098869284810843 0.8820245145301425 1.0421551035698768 0.8939437566430638 0.982687645612148 0.9913994006006993 1.0 12.99730165002606 -8.981030286575043 24.126358388365116 0.9923622667170195 0.9549238076552568 0.11566426496365645 0.04546805062126761 119.54168276743043 152040.38632306366 0.007242934113322966 0.007367933293992753 1.0446473656723852e-09 8.981030286575043 -0.0374384590617628 TTRTS(ph)DVGGYYYEK ddPTM_A549_PD325901_60min_R1 2 TTRTSDVGGYYYEK 14 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.001)T(0.004)RT(0.272)S(0.723)DVGGYYYEK;T(0.006)T(0.006)RT(0.082)S(0.907)DVGGYYYEK 153.58 6.0069e-15 280920000.0 28753.0 25945.0 28135.0 27950.0 27677.0 29119.0 29234.0 29996.0 31830.0 30528.0 33060.0 True False 31671.983393160135 28131.47620398541 30044.41028949907 29676.408020944393 25733.06300046656 28881.86451837368 30346.515867458602 29397.706248593222 30492.29579180665 28600.456870058915 28993.829584606887 1.0923697851205936 0.9702573480986689 1.0362346306074015 1.0235421966024072 0.8875358436309669 0.9961383139848263 1.0466542813499142 1.013929745389714 1.0516822451076042 0.9864325368471912 1.0 14.82345828065595 -7.729466051709113 23.87105691363689 1.0255900516055374 0.9970819888947793 0.024581530932485274 0.04998388440489078 268.045231877806 200119.56790425442 0.007453487651137975 0.011054578810215905 1.8643779087936982e-08 7.729466051709113 -0.02850806271075812 TTS(ph)FAESCKPVQQPSAFGSMK ddPTM_A549_MK2206_60min_R1 3 TTSFAESCKPVQQPSAFGSMK 21 1 A0A3B3ITW1;P49841;P49841-2 A0A3B3ITW1 GSK3B Glycogen synthase kinase-3 beta 1 T(0.123)T(0.123)S(0.722)FAES(0.032)CKPVQQPSAFGSMK;T(0.122)T(0.122)S(0.724)FAES(0.032)CKPVQQPSAFGSMK;T(0.088)T(0.088)S(0.822)FAES(0.002)CKPVQQPSAFGSMK 157.88 4.8736e-28 35442100.0 4393.6 5306.700000000001 5000.9 4509.1 8438.6 7225.0 7704.7 6831.7 10747.3 11027.7 10219.4 True False 5135.132266793166 5576.788363251667 5710.1028179697305 5613.829702421191 7197.293118545821 7989.544704433149 9104.544258747814 7800.114396203792 8313.053709911474 8536.534910929724 7681.640938908399 0.6684941808179458 0.7259892004330206 0.7433441452655513 0.7308112611703177 0.9369473496334226 1.0400830718297678 1.1852342918857668 1.0154229360936817 1.0821976418872816 1.1112905405004272 1.0 12.907198814560383 -6.888477643320571 2.4372099490964003 1.0498191147631886 0.7134927238784243 0.9078862941154419 0.05257230347208315 0.0660933860711573 0.7967915416104664 0.008105240200720688 0.016875633536280316 1.292773248677847e-07 6.888477643320571 -0.33632639088476424 TTS(ph)FAESCKPVQQPSAFGSMK ddPTM_A549_PD325901_60min_R1 2 TTSFAESCKPVQQPSAFGSMK 21 1 A0A3B3ITW1;P49841;P49841-2 A0A3B3ITW1 GSK3B Glycogen synthase kinase-3 beta 1 T(0.112)T(0.112)S(0.748)FAES(0.029)CKPVQQPSAFGSMK;T(0.122)T(0.122)S(0.755)FAES(0.002)CKPVQQPSAFGSMK 97.691 1.5813e-07 71203000.0 4651.2 5282.9 7372.5 4827.9 5266.1 5199.5 5897.9 6324.2 4072.8 5300.4 5741.5 True False 5123.386399967531 5728.10852333916 7872.842184443991 5126.10841804356 4896.2273030587485 5157.156995888732 6122.3478119547135 6198.0588697610765 3901.634379543516 4965.731839428079 5035.3318983672225 1.0174873282193895 1.1375831104989484 1.563520010864998 1.018027911865308 0.9723742946609775 1.0241940551249489 1.2158777088636346 1.2309136706104487 0.7748514811523498 0.9861776620997491 1.0 12.297871159686085 -8.756374441869317 24.998856815672106 0.8936798637617636 1.1490503862286927 0.270145242340316 0.16468797963972925 112.88074415456859 557141.4055815164 0.02988856290450668 0.03338445434072294 1.7523689853642787e-09 8.756374441869317 0.25537052246692915 TTS(ph)FFSR ddPTM_A549_MK2206_60min_R1 2 TTSFFSR 7 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 T(0.094)T(0.035)S(0.87)FFSR;T(0.077)T(0.077)S(0.846)FFSR 86.13600000000001 0.013288 23968000.0 6116.6 7415.4 7163.8 6422.9 8962.5 6901.799999999999 5473.7 7063.4 10735.400000000001 9161.9 9632.8 True False 7148.932543487595 7792.812186265736 8179.734561253281 7996.510788334935 7644.128122551957 7632.143894955948 6468.200437279566 8064.658580755279 8303.849040911084 7092.220426784104 7240.709908244796 0.9873248112519054 1.0762497441573067 1.1296868214454006 1.1043821517044246 1.0557152847468452 1.0540601669824443 0.8933102581439433 1.1137939073587626 1.1468280246189286 0.9794924139563151 1.0 12.821915436514104 -3.6489191751419683 13.980624158749738 1.06343635609748 1.0637633649701441 0.0 0.07487811892063578 0.0 0.0 0.010176114822525917 0.0 0.00022442995627875676 3.6489191751419683 0.00032700887266412515 TTS(ph)FKGTSPSSK ddPTM_A549_MK2206_60min_R1 1 TTSFKGTSPSSK 12 1 F8W8I7;F5H6V0;F5H497;F5GWA4;Q9H3F6-2;Q9H3F6 F8W8I7 KCTD10 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 1 T(0.051)T(0.107)S(0.842)FKGTSPSSK 88.73 7.7234e-05 29975000.0 3738.2 4118.4 4326.6 3944.1 5404.1 3701.8 4075.5 3671.1 5317.7 5773.2 5075.6 True False 4369.116769784733 4328.008968891336 4940.17693859662 4910.40467705738 4609.164048767984 4093.5220189440306 4815.9655958735175 4191.4896672722325 4113.249440621949 4469.030110338465 3815.188440566326 1.1451902934409663 1.1344155174282524 1.2948710176589078 1.2870674027122184 1.2081091460016589 1.0729540841071508 1.2623139514331922 1.0986324090062636 1.0781248435559265 1.1713786042177994 1.0 11.897538601369728 -8.754784936905224 0.6582789667940412 1.01433008735174 1.2119253075570744 0.21188243556841946 0.08108422877175182 0.3293161937967801 0.3061077844842452 0.019744892718228414 0.01987113071542407 1.7587943552022038e-09 8.754784936905224 0.19759522020533438 TTS(ph)FKGTSPSSK ddPTM_A549_PD325901_60min_R1 1 TTSFKGTSPSSK 12 1 F8W8I7;F5H6V0;F5H497;F5GWA4;Q9H3F6-2;Q9H3F6 F8W8I7 KCTD10 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 1 T(0.098)T(0.117)S(0.785)FKGTSPSSK 90.367 7.6018e-05 36593000.0 4074.6 4167.7 5143.2 5172.6 5627.1 5094.4 5046.7 5498.8 5120.6 5495.3 5471.4 True False 4488.250392438018 4518.926705544422 5492.24848057407 5492.099754173059 5231.871908441143 5052.912895442935 5238.754930160206 5389.122120274849 4905.3989893661665 5148.325820166234 4798.452486062254 0.9353537219498871 0.9417466815958369 1.1445874470002648 1.1445564523407488 1.0903248336078795 1.0530296819901406 1.0917592589229275 1.1230958597440057 1.0222877070502527 1.072913785250606 1.0 12.228353492443116 -8.965631032546247 16.469753371119808 1.0098307913179254 1.068274690543022 0.021027592449344712 0.06985145223618698 7.3133977238162595 3504.4375294800766 0.01239318402874379 0.013077680476053163 1.0823531052199361e-09 8.965631032546247 0.05844389922509663 TTS(ph)PEPR ddPTM_A549_MK2206_60min_R1 2 TTSPEPR 7 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 T(0.149)T(0.06)S(0.791)PEPR;T(0.189)T(0.081)S(0.729)PEPR 91.069 0.01245 846520000.0 4775.5 5111.5 3458.8 2625.3 3023.5 1910.3400000000001 2241.9 2559.1 2759.3 6333.0 6376.0 True False 5581.487650234609 5371.653517018272 3949.309849585813 3268.498617854195 2578.7471552062325 2112.4909108189363 2649.224210376358 2921.8602619150583 2134.322955696662 4902.370901540481 4792.663231352133 1.1645899953333312 1.1208076298535983 0.8240324134920725 0.6819796134376143 0.5380614140248493 0.44077599631863734 0.5527666106489489 0.6096527381271324 0.4453313017561042 1.0228907529890008 1.0 12.226611853551217 -5.8585342112251215 2.4208683516497524 0.6722455048901442 1.1687298179487957 0.5012443557177164 0.183957964571231 0.22857302704701477 2.615004264020625 0.03180493903236898 0.1422595764502866 1.3850510752576324e-06 5.8585342112251215 0.4964843130586515 TTS(ph)PEPR ddPTM_A549_PD325901_60min_R1 2 TTSPEPR 7 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 T(0.021)T(0.035)S(0.944)PEPR;T(0.002)T(0.003)S(0.995)PEPR 117.89 0.00695 1221340000.0 8678.5 8554.3 7323.299999999999 7605.200000000001 8699.6 8215.5 5790.0 6807.0 8381.3 9749.2 9794.2 True False 9559.534931225968 9275.200882318457 7820.303176580359 8074.955931337623 8088.570107990713 8148.595691840346 6010.341618409573 6671.229045011808 8029.063107755865 9133.633848191124 8589.575490549212 1.1129228611756152 1.0798206375301798 0.9104411719979346 0.9400878937756812 0.9416728587914809 0.948661048593838 0.6997251057427142 0.776665744698549 0.9347450425914461 1.0633393766945198 1.0 13.068371117677398 -5.711141611287571 5.4212066691304575 0.9296911539877879 1.102230907403637 0.3442665588740953 0.09557469742244636 0.1797363516917173 11.374628115990218 0.013730951882470145 0.05439089687024368 1.944725857499774e-06 5.711141611287571 0.17253975341584904 TTS(ph)PGGRPSAR ddPTM_A549_MK2206_60min_R1 1 TTSPGGRPSAR 11 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 T(0.022)T(0.06)S(0.884)PGGRPS(0.034)AR 58.82899999999999 0.008827799999999998 30930000.0 429.54 494.78 557.58 476.41 739.39 551.24 497.53 466.37 949.36 822.0 753.83 True False 502.03585075526587 519.9621886237506 636.6532282676242 593.1304713868576 630.6267104640102 609.5718509165026 587.9247608673664 532.4793756982244 734.3314758163962 636.3096290962064 566.6332063504043 0.8859979350465536 0.917634516996887 1.123572041194352 1.0467626406985888 1.112936381765866 1.0757785531890365 1.0375755502472186 0.9397249750466279 1.295955598059828 1.1229656539096553 1.0 9.146271340084617 -4.04799871587106 0.5633736824674868 1.1177090547852098 0.00019202978333388948 0.29267596139973584 0.09320253612818957 11.88414367510814 0.9142585033091783 0.02146476677952766 11.911147820113435 8.95367412982511e-05 4.04799871587106 -1.1175170250018758 TTS(ph)PGGRPSAR ddPTM_A549_PD325901_60min_R1 3 TTSPGGRPSAR 11 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 T(0.216)T(0.216)S(0.568)PGGRPSAR;T(0.014)T(0.121)S(0.853)PGGRPS(0.012)AR;T(0.001)T(0.038)S(0.958)PGGRPS(0.003)AR 74.76 0.0011462 259795000.0 5573.6 4684.83 5712.5 4836.71 5590.3 4967.09 5907.55 5925.45 5443.779999999999 5702.4 6031.200000000001 True False 6139.427768932544 5079.637065512315 6100.184602053076 5135.462591734598 5197.65661348803 4926.639665873438 6132.3650479854 5807.262251324403 5214.996857854892 5342.349490822326 5289.400634926833 1.1607038665955522 0.9603426581020517 1.1532846579577458 0.9708968834435125 0.9826551195927568 0.931417377111119 1.1593686073791285 1.0979055382906788 0.9859334200210437 1.0100103697091618 1.0 12.368888538190724 -3.9272261381914406 2.3068970546924894 1.0125814176403258 45.457976645010646 0.18623280334059322 0.07525728270450074 577.1303181779989 11.770771136288937 0.010232008096999862 134535.85655122262 0.00011824257034658003 3.9272261381914406 44.44539522737032 TTS(ph)PLEEEER ddPTM_A549_MK2206_60min_R1 3 TTSPLEEEER 10 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.015)T(0.238)S(0.748)PLEEEER;T(0.02)T(0.003)S(0.977)PLEEEER;T(0.007)T(0.002)S(0.99)PLEEEER 270.1 5.6199e-72 166598000.0 13318.31 14280.54 13852.41 11293.880000000001 19157.47 17414.66 15098.25 14808.099999999999 20258.08 17356.35 18281.09 True False 15566.115126582776 15007.358488881966 15816.89003512809 14060.881107001549 16339.431540747044 19257.46776228426 17841.40659008645 16907.193522904294 15669.657225506273 13435.538480491414 13741.390820583312 1.132790365242083 1.0921280592938492 1.1510399668886409 1.023250214668203 1.1890667949180305 1.4014205704300604 1.2983697809803723 1.2303844453342312 1.1403254175723319 0.9777422573824361 1.0 13.746240411974055 -9.91984042623494 0.9586267894356982 1.0182228390439072 1.186586548711379 0.36556662275800655 0.09760441808404186 0.4611030079015875 0.8641841384091056 0.038790766647135634 0.02117622441659747 1.2027062664173758e-10 9.91984042623494 0.16836370966747172 TTS(ph)PLEEEER ddPTM_A549_PD325901_60min_R1 3 TTSPLEEEER 10 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.012)T(0.002)S(0.986)PLEEEER;T(0.001)T(0.003)S(0.995)PLEEEER;T(0.019)T(0.003)S(0.978)PLEEEER 265.65 1.0739999999999997e-71 173054000.0 12237.5 12026.5 12334.3 12615.099999999999 14496.9 12270.9 11985.1 11235.9 12833.599999999999 14462.7 13886.9 True False 13479.84199122865 13040.015362005417 13171.37977017126 13394.30607602919 13478.687755589977 12170.969858803921 12441.199538998371 11011.791160106972 12294.248422046168 13549.522653780181 12178.899336312077 1.1068193946753249 1.0707055705047068 1.081491800404331 1.0997961068693054 1.1067246212802258 0.9993489167379425 1.0215372666645033 0.9041696508053642 1.0094712241680306 1.1125408199558324 1.0 13.572096135634743 -7.2680234026538235 24.290625211019734 0.9973199233223017 1.0915892210026001 0.4462395293257895 0.04648043444633204 151.23281104069892 557947.9607545637 0.004614546116231005 0.007488088287127966 5.39481550904321e-08 7.2680234026538235 0.09426929768029846 TTS(ph)PLEEEEREIK ddPTM_A549_PD325901_60min_R1 2 TTSPLEEEEREIK 13 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.003)T(0.152)S(0.845)PLEEEEREIK;T(0.021)T(0.004)S(0.975)PLEEEEREIK 183.23 1.1195999999999999e-25 227130000.0 6338.0 5708.3 6092.7 6234.9 6174.7 7343.3 8056.5 7528.7 7460.9 7417.5 8205.900000000001 True False 6981.429094211 6189.358474280591 6506.1872603814045 6620.01561251472 5741.010373558585 7283.498599463355 8363.09451618596 7378.534172349102 7147.344318978642 6949.157784121532 7196.6263214859555 0.970097484896156 0.8600361055015311 0.9040607320345084 0.9198776366573695 0.797736344378262 1.0120712503465739 1.162085419277286 1.0252768231581024 0.993152068718619 0.9656132573362061 1.0 12.813105034283854 -7.324533083154747 14.23354377210883 1.013807882795735 0.891081802101621 0.541098915066105 0.061776067773865496 1.804994162645613 406.6874093011673 0.009188834692209213 0.014689868201854587 4.736602248900475e-08 7.324533083154747 -0.12272608069411406 TTS(ph)PPEVSGYSYEK ddPTM_A549_MK2206_60min_R1 2 TTSPPEVSGYSYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.01)T(0.001)S(0.989)PPEVSGYSYEK;T(0.005)T(0.006)S(0.989)PPEVSGYSYEK 273.07 3.2911999999999996e-84 545110000.0 54806.0 62647.0 53164.0 50546.0 78778.0 59388.0 56182.0 57266.0 82881.0 86668.0 89256.0 True False 64055.91292194699 65835.46471302824 60703.45462107673 62929.77226909618 67189.8605565857 65672.3987414361 66389.54216841285 65383.63086976974 64108.585833760364 67089.63860645982 67091.27185971863 0.9547577672380652 0.9812821085085977 0.9047891467611732 0.937972563714044 1.0014694712759837 0.9788515990388548 0.9895406709121116 0.9745474941432113 0.955542860594523 0.9999756562483683 1.0 16.03383747289389 -6.746323655683263 24.986756473649056 0.9803065190237836 0.9444625644029772 0.4473830185508554 0.02139273945719772 213.56797974378182 353032.4006105562 0.003348075072198496 0.006947030887316083 1.793396609281248e-07 6.746323655683263 -0.03584395462080647 TTS(ph)PPEVSGYSYEK ddPTM_A549_PD325901_60min_R1 3 TTSPPEVSGYSYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.402)T(0.063)S(0.535)PPEVSGYSYEK;T(0.102)T(0.102)S(0.797)PPEVSGYSYEK;T(0.041)T(0.006)S(0.953)PPEVSGYSYEK 244.37 8.5128e-58 506782000.0 50226.1 52316.1 49092.2 52191.0 60086.1 57265.5 49796.8 49545.4 59552.0 58312.1 64366.0 True False 55325.016697499435 56724.961350368896 52423.891907380355 55414.71953563896 55865.859621791875 56799.14875431604 51691.84447385454 48557.1781293856 57049.236537658464 54630.26405439472 56449.3900496917 0.980081744883293 1.004881740979568 0.9286883677792135 0.9816708291596785 0.9896627682356506 1.0061959695989 0.9157201597457625 0.8601895979148989 1.0106262704953717 0.9677742134379906 1.0 15.784670371937644 TTS(ph)PSS(ph)DTDLLDR ddPTM_A549_MK2206_60min_R1 1 TTSPSSDTDLLDR 13 0 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7ENU0;K7ERZ4;K7EJ43 Q96QT6 PHF12 PHD finger protein 12 2 T(0.255)T(0.302)S(0.442)PS(0.204)S(0.774)DT(0.022)DLLDR 60.196000000000005 0.0094875 1770800.0 300.61 266.18 277.58 245.04 412.94 324.22 411.1 428.75 639.67 417.09 438.12 True False 351.3456187911266 279.72742505329654 316.9450179391783 305.0748110002635 352.1970730183103 358.52874520018224 485.79154863540754 489.52662549180644 494.785766343088 322.8690793184143 329.32271250313613 1.0668733295696413 0.8494021652109182 0.9624146950877553 0.9263703941991498 1.0694588002792438 1.0886851455675655 1.4751231244968608 1.4864648167476293 1.5024343829257638 0.9804033158367104 1.0 8.363358203942061 -7.365464018296437 2.4227682111302156 1.2811286764492915 0.9561876314859824 0.41205419328181714 0.17633736620867002 0.27226556761219906 3.1204100591568595 0.033283755405482465 0.05706062549560349 4.3105827010597736e-08 7.365464018296437 -0.3249410449633091 TTS(ph)PSSDTDLLDR ddPTM_A549_MK2206_60min_R1 2 TTSPSSDTDLLDR 13 0 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7ENU0;K7ERZ4;K7EJ43 Q96QT6 PHF12 PHD finger protein 12 1 TT(0.014)S(0.968)PS(0.014)S(0.003)DTDLLDR;T(0.026)T(0.026)S(0.882)PS(0.026)S(0.026)DT(0.015)DLLDR 170.66 1.134e-21 44524000.0 1361.0 1573.5300000000002 1593.7 1034.67 1929.56 1511.12 1377.1799999999998 1435.96 2318.1000000000004 1789.27 1886.01 True False 1590.703526744696 1653.6159559099606 1819.710624287299 1288.1641964481014 1645.7242800726756 1671.0257153997263 1627.3957794933365 1639.5117274430659 1793.0540512450382 1385.0726642980155 1417.6616657720251 1.1220614658282633 1.166439070643446 1.283600077664742 0.9086541786023378 1.1608723857087953 1.1787196873167372 1.1479437010854738 1.15649013232662 1.2647968796338886 0.9770121445329042 1.0 10.469297549712067 -11.068870019471271 1.4019228255707563 1.000522563808886 1.1659812707926642 0.3151560633264323 0.09216528550210654 0.4298028927336555 1.5154790432575318 0.06596239608011496 0.014784296812385751 8.533554776103113e-12 11.068870019471271 0.1654587069837783 TTS(ph)PSSDTDLLDR ddPTM_A549_PD325901_60min_R1 2 TTSPSSDTDLLDR 13 0 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-2;K7ENU0;K7ERZ4;K7EJ43 Q96QT6 PHF12 PHD finger protein 12 1 T(0.067)T(0.067)S(0.779)PS(0.067)S(0.014)DT(0.006)DLLDR;T(0.005)T(0.304)S(0.674)PS(0.014)S(0.003)DTDLLDR 155.86 2.3691e-18 57269000.0 1226.78 1322.95 1314.8200000000002 1125.9 1195.3 1164.1 902.95 1302.7199999999998 1432.7800000000002 1064.34 1442.96 True False 1351.3218024922967 1434.439639393429 1404.051591854954 1195.4442858955742 1111.3462515611413 1154.619955556125 937.3122563631987 1276.7362276359302 1372.5652392266654 997.1373907585987 1265.485067677083 1.0678291170774343 1.1335097315897043 1.1094967674586813 0.9446530160090508 0.8781978388738494 0.9123931882306116 0.7406742918616366 1.0088907883990286 1.0846159107559745 0.7879487606984872 1.0 10.305474768866654 -6.246528839204718 23.333785017794227 0.9913869631609006 1.1066016966094865 0.19268738277925568 0.1115134515385209 466.8055266299037 730508.1307707878 0.015517821833398684 0.040827739033190466 5.668539284953327e-07 6.246528839204718 0.1152147334485859 TTS(ph)RS(ph)PVLSR ddPTM_A549_MK2206_60min_R1 1 TTSRSPVLSR 10 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;H7C3Z6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 2 T(0.338)T(0.39)S(0.456)RS(0.816)PVLSR 47.242 0.0097649 7202800.0 884.84 680.06 937.52 777.19 920.42 749.0 827.05 645.58 1284.1 1295.0 1599.0 True False 1034.1793597389992 714.6721492288851 1070.4744333825874 967.6015848893852 785.0274372730016 828.2586828540382 977.314279491398 737.0929420058316 993.2534002863347 1002.4586005834395 1201.9241698450535 0.8604364448984505 0.5946066874759806 0.8906339187110183 0.8050437865927298 0.6531422339016643 0.689110597518655 0.813124741153503 0.6132607701040359 0.82638607759621 0.8340447972792425 1.0 10.231130163041078 -9.785275980901632 0.8327441699556449 0.9801120627141006 0.7407861878761891 0.24233309533632852 0.10512112895134705 0.31049482800797157 0.44888578458637485 0.03466296276533275 0.019137696142702554 1.639547559602726e-10 9.785275980901632 -0.23932587483791146 TTSAT(ph)PLKDNTQQFR ddPTM_A549_MK2206_60min_R1 2 TTSATPLKDNTQQFR 15 1 Q14207 Q14207 NPAT Protein NPAT 1 T(0.141)T(0.026)S(0.026)AT(0.807)PLKDNTQQFR;T(0.037)T(0.037)S(0.037)AT(0.88)PLKDNT(0.008)QQFR 110.37 1.0973e-06 37066000.0 12500.3 14649.8 10969.099999999999 13052.3 17660.3 13588.8 11563.8 12431.0 20292.5 21988.0 29229.0 True False 14610.04503700716 15395.412245644986 12524.683321120548 16250.114085940007 15062.493264457946 15026.7577964846 13664.792775748305 14193.132318340857 15696.281150463708 17020.895528670786 21970.63262063857 0.6649806261510608 0.7007268525888046 0.5700647558666666 0.7396288657921996 0.6855739442982028 0.6839474336468992 0.6219571831041405 0.6460047174521613 0.7144209919435401 0.774711216675748 1.0 14.42328879075434 -10.345843262777896 0.6009207406021898 1.020197545324059 0.66119817523522 0.4644213728955462 0.07769968185672886 0.21340831294550475 0.13277519630443024 0.038904183939676595 0.009981279138451845 4.509794340096164e-11 10.345843262777896 -0.3589993700888391 TTSAT(ph)PLKDNTQQFR ddPTM_A549_PD325901_60min_R1 2 TTSATPLKDNTQQFR 15 1 Q14207 Q14207 NPAT Protein NPAT 1 T(0.002)TS(0.002)AT(0.997)PLKDNTQQFR;TTS(0.026)AT(0.97)PLKDNT(0.003)QQFR 162.42 3.329e-20 67663000.0 19603.1 23191.7 23358.2 26454.4 26270.1 26492.1 21596.2 24521.5 29292.5 27948.3 47713.0 True False 21593.192280960524 25146.14595027822 24943.42791626717 28088.428205698456 24424.97880292507 26276.357121027773 22418.05520889408 24032.399445755396 28061.4380924127 26183.639568313287 41844.603477626995 0.5160329047568997 0.6009411933780918 0.5960966491080181 0.6712556906105339 0.5837067811141846 0.627950916898446 0.5357454330014219 0.5743249415328974 0.670610682388621 0.6257351579950533 1.0 15.352753956014963 -10.245691145627136 0.5750615195584411 1.023020841787798 0.5855334988483776 0.11460561769033673 0.11659899079598451 0.18626292243944706 0.10949099545622387 0.039839011953275216 0.010998014003449543 5.6794836595512874e-11 10.245691145627136 -0.4374873429394204 TTSFFLNS(ph)PEKEHQEMDEGSQSLEK ddPTM_A549_MK2206_60min_R1 8 TTSFFLNSPEKEHQEMDEGSQSLEK 25 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 TTS(0.001)FFLNS(0.999)PEKEHQEMDEGSQSLEK;T(0.003)T(0.003)S(0.003)FFLNS(0.986)PEKEHQEMDEGS(0.005)QSLEK;T(0.11)T(0.11)S(0.11)FFLNS(0.671)PEKEHQEMDEGSQSLEK;TTSFFLNS(0.999)PEKEHQEMDEGSQSLEK;T(0.002)T(0.002)S(0.002)FFLNS(0.994)PEKEHQEMDEGSQSLEK;TTSFFLNS(0.999)PEKEHQEMDEGSQSLEK;T(0.002)T(0.002)S(0.002)FFLNS(0.994)PEKEHQEMDEGSQSLEK;T(0.001)T(0.001)S(0.001)FFLNS(0.993)PEKEHQEMDEGS(0.002)QS(0.001)LEK 212.78 5.3743999999999985e-81 201609600.0 17805.89 20724.0 20623.85 18630.07 25874.699999999997 22400.8 20013.37 21494.260000000002 29259.800000000003 29771.899999999998 30860.700000000004 True False 20811.08891978555 21778.76308063909 23548.622048508278 23194.437986335615 22068.565906007818 24771.237787552396 23649.540271742666 24541.13717841053 22632.502018299285 23046.40711251744 23197.136478009532 0.8971404267726789 0.9388556687281194 1.0151521102974046 0.9998836713455355 0.9513487118088226 1.0678575698787256 1.019502570679877 1.0579382158515593 0.9756593034556006 0.9935022425877875 1.0 14.501659105421796 -5.580510598651018 3.550742094607146 0.999853102558599 0.9030014468224338 0.5350585444661162 0.03267730506256935 0.1411070986543011 3.4691516089907775 0.004661182689708006 0.02406289262689757 2.6271774112717505e-06 5.580510598651018 -0.09685165573616528 TTSFFLNS(ph)PEKEHQEMDEGSQSLEK ddPTM_A549_PD325901_60min_R1 9 TTSFFLNSPEKEHQEMDEGSQSLEK 25 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 TTSFFLNS(1)PEKEHQEMDEGSQSLEK;T(0.002)T(0.002)S(0.002)FFLNS(0.973)PEKEHQEMDEGS(0.017)QS(0.004)LEK;TTSFFLNS(0.999)PEKEHQEMDEGSQSLEK;TTSFFLNS(1)PEKEHQEMDEGSQSLEK;T(0.001)T(0.001)S(0.001)FFLNS(0.996)PEKEHQEMDEGSQSLEK;T(0.003)T(0.003)S(0.003)FFLNS(0.99)PEKEHQEMDEGSQSLEK;T(0.002)T(0.002)S(0.001)FFLNS(0.995)PEKEHQEMDEGSQSLEK;TTSFFLNS(0.998)PEKEHQEMDEGSQSLEK;TTSFFLNS(1)PEKEHQEMDEGSQSLEK 297.1 1.2061999999999994e-170 323487600.0 21706.869999999995 22567.629999999997 23334.999999999996 25923.899999999998 25875.300000000003 24754.7 24259.5 26943.5 25787.7 25945.6 28914.9 True False 23910.535462646898 24469.48338120436 24918.653424754233 27525.160425551363 24057.908192938998 24553.105930594633 25182.708547807764 26406.090755733134 24703.932648142378 24307.3903880962 25358.55060665305 0.9428983475251834 0.9649401403400621 0.982652905178918 1.0854390241976164 0.9487099072068883 0.9682377479473491 0.9930657685617429 1.0413091491437705 0.9741855136492332 0.9585480954782538 1.0 14.630184668703807 -5.652200935045372 3.0928353720510864 0.9938993735259047 0.9474677545893467 0.16389641364473628 0.03707813245280478 0.33303317410846883 6.033580211837347 0.00478161897560991 0.02434602936225624 2.227404357566961e-06 5.652200935045372 -0.046431618936558006 TTSIS(ph)PALAR ddPTM_A549_MK2206_60min_R1 2 TTSISPALAR 10 0 Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5;Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3 Q9UKE5-6 TNIK TRAF2 and NCK-interacting protein kinase 1 TT(0.001)S(0.009)IS(0.99)PALAR;TT(0.002)S(0.069)IS(0.929)PALAR 110.88 0.00017516 18972700.0 5433.3 5921.3 5170.700000000001 4636.3 6991.1 5502.2 5553.7 5130.4 8070.5 7429.8 8447.7 True False 6350.30820856867 6222.6688780828135 5903.983011233196 5772.193708131418 5962.718451054172 6084.439151935237 6562.735401742801 5857.649911191053 6242.544635940241 5751.403019779795 6349.902945340875 1.0000638219562226 0.9799628327624413 0.9297753150014891 0.9090207768241024 0.9390251319398838 0.9581940392332425 1.0335174345551357 0.9224786522901105 0.9830929212108028 0.9057466026311128 1.0 12.632518825941304 -7.544703581224094 24.88981720696018 0.9886489378446475 0.9494760753645117 0.0 0.04161155613480746 248.3687097522598 283247.42812598165 0.005137241129638144 0.0076200307268772995 2.852964835666812e-08 7.544703581224094 -0.03917286248013574 TTSQAHSLPLS(ph)PASTR ddPTM_A549_MK2206_60min_R1 1 TTSQAHSLPLSPASTR 16 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 T(0.02)T(0.02)S(0.019)QAHS(0.112)LPLS(0.633)PAS(0.099)T(0.099)R 43.497 0.019987 4392400.0 1891.2 1872.6 1902.7 1869.2 2312.7 1805.1 1881.8 1637.6 2936.0 2693.4 2952.2 True False 2210.3883245992433 1967.907341478708 2172.5314706854774 2327.154083911577 1972.5048936151636 1996.1144838715961 2223.6987015862555 1869.7348149396678 2271.0006878285803 2084.9590693524597 2219.0872634249936 0.9960799473868711 0.8868093535183432 0.9790202965395508 1.0486987701059536 0.8888811747631552 0.8995204996088095 1.0020780787836818 0.8425693057486497 1.023394043695002 0.9395570438877121 1.0 11.11575068587665 TTSRS(ph)PVLSR ddPTM_A549_MK2206_60min_R1 4 TTSRSPVLSR 10 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;H7C3Z6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 T(0.006)T(0.006)S(0.007)RS(0.981)PVLSR;T(0.008)T(0.008)S(0.006)RS(0.978)PVLS(0.001)R;T(0.003)T(0.003)S(0.021)RS(0.972)PVLSR;T(0.009)T(0.009)S(0.04)RS(0.942)PVLS(0.001)R 109.22 6.1111e-05 705074000.0 5410.74 6063.05 5634.78 5052.63 6754.96 5580.990000000001 5705.83 5741.540000000001 7805.6 7922.9000000000015 7491.9 True False 6323.940632107714 6371.633347619612 6433.876533551858 6290.524576821183 5761.314332241402 6171.5666574386705 6742.505453540182 6555.420877728807 6037.644062981864 6133.111387306979 5631.454464078899 1.1229675517126072 1.1314365388661238 1.1424893115253496 1.117033728488131 1.0230597386502607 1.09590989269379 1.1972937891175883 1.1640724291643607 1.0721287194087972 1.0890812358384456 1.0 12.45929186720116 -9.511359914041583 1.1262017719357378 1.0155441125011633 1.1214435817286736 0.23553289642200514 0.04842015033180425 0.26384015556240364 0.6949862385786268 0.012617696200184625 0.009393167238257777 3.080633870024528e-10 9.511359914041583 0.10589946922751037 TTSRS(ph)PVLSR ddPTM_A549_PD325901_60min_R1 5 TTSRSPVLSR 10 1 A0A0D9SEY1;O95819-2;O95819-3;H7C360;O95819;G5E948;H7C0P6;E7ENQ1;G3XAA2;O95819-4;O95819-5;C9J840;A0A0D9SG62;E7EX83;H7C3Z6;O95819-6;E7EN19 A0A0D9SEY1;O95819-6 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 T(0.005)T(0.005)S(0.009)RS(0.98)PVLSR;T(0.005)T(0.005)S(0.037)RS(0.952)PVLSR;TT(0.001)S(0.006)RS(0.988)PVLS(0.004)R;TT(0.002)S(0.012)RS(0.987)PVLSR;T(0.01)T(0.01)S(0.049)RS(0.931)PVLSR 119.25 1.6725e-05 762111000.0 20767.8 22017.5 21159.8 21105.5 25863.100000000002 22380.600000000002 21931.5 23889.700000000004 23450.8 23766.000000000004 27637.600000000002 True False 22876.131767553677 23872.991995422977 22595.831272214044 22409.138800931734 24046.565078851287 22198.33981386429 22766.11523387729 23413.201192392902 22465.244428353722 22265.41070406908 24238.35040918123 0.9437990367070708 0.9849264323854375 0.9322346979378178 0.9245323391497546 0.9920875254671913 0.9158354194539492 0.9392600919431271 0.9659568740092243 0.9268470852638605 0.9186025586805272 1.0 14.56500389612125 -10.923064403265922 1.12479568727234 1.0006212423957739 0.946202790680324 0.0 0.033368568491316794 0.38789731251717535 0.8552157546650455 0.016785884964119625 0.0037784631173179884 1.1938110563201605e-11 10.923064403265922 -0.0544184517154499 TTTAAAVASTGPSSRS(ph)PSTLLPK ddPTM_A549_MK2206_60min_R1 3 TTTAAAVASTGPSSRSPSTLLPK 23 1 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TTTAAAVASTGPS(0.031)S(0.068)RS(0.898)PS(0.002)T(0.001)LLPK;TTTAAAVAS(0.171)T(0.156)GPS(0.119)S(0.119)RS(0.415)PS(0.015)T(0.004)LLPK;TTTAAAVAS(0.007)T(0.032)GPS(0.154)S(0.154)RS(0.638)PS(0.007)T(0.008)LLPK 175.23 3.5806999999999995e-41 113503000.0 17306.4 20905.4 22911.199999999997 19451.699999999997 25648.8 19696.899999999998 20548.3 19562.7 32963.4 33521.5 35620.6 True False 20227.297219143587 21969.39556581705 26160.35267313243 24217.367373219993 21875.895496759902 21781.212884255965 24281.66012849659 22335.77263325612 25497.242531733165 25948.969868307162 26775.021941452593 0.7554539922833101 0.8205183029861289 0.9770431833944254 0.9044760981400771 0.8170262397765601 0.8134900106481219 0.9068773195253362 0.8342018423774396 0.9522771853366367 0.9691484072374726 1.0 14.708600136777525 -8.908716095340337 2.928802098851149 0.9809514139300273 0.8573063593315413 0.4660971679864332 0.057193670529508175 0.1637175149028148 2.6996708823287454 0.010901933398310642 0.011330906228681851 1.2339111954442344e-09 8.908716095340337 -0.12364505459848596 TTTAAAVASTGPSSRS(ph)PSTLLPK ddPTM_A549_PD325901_60min_R1 2 TTTAAAVASTGPSSRSPSTLLPK 23 1 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TTTAAAVAS(0.002)T(0.002)GPS(0.174)S(0.146)RS(0.402)PS(0.111)T(0.163)LLPK;TTTAAAVAS(0.06)T(0.011)GPS(0.039)S(0.221)RS(0.665)PS(0.003)T(0.001)LLPK 156.73 2.1564e-33 406170000.0 9728.5 9632.4 9396.400000000001 9477.9 11406.9 12191.6 9646.2 10608.0 12755.9 11309.5 12018.1 True False 10716.130158256823 10444.156152910744 10034.096209143383 10063.328357127335 10605.718695668686 12092.3156517121 10013.291419603174 10396.415118184988 12219.81388283715 10595.416239908658 10539.949889012833 1.0167154750353837 0.9909113670263322 0.9520060640519016 0.9547795258132733 1.0062399543971658 1.1472839794349974 0.9500321657165882 0.9863818355552649 1.1593806433155303 1.0052624871541036 1.0 13.363580387412192 -7.013220776429269 23.547413157538294 1.0641976713540482 0.9779483676268046 0.12375590455532615 0.0643340875412584 341.5704292196907 608371.6654047739 0.011015202475773369 0.019672782917985302 9.700167275622719e-08 7.013220776429269 -0.0862493037272436 TTTLS(ph)GTAPAAGVVPSR ddPTM_A549_MK2206_60min_R1 1 TTTLSGTAPAAGVVPSR 17 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TT(0.001)T(0.012)LS(0.92)GT(0.067)APAAGVVPSR 69.805 0.0014062 3669000.0 2201.2 2681.3 2392.6 1795.8 2983.1 2322.4 2563.6 2178.9 3602.7 3006.5 3259.7 True False 2572.7087458269098 2817.766717241728 2731.9066572565675 2235.771080616524 2544.2899416886744 2568.154826515646 3029.3729362241083 2487.7657476013915 2786.6942023297065 2327.329561895067 2450.2265268567367 1.0499881205381034 1.1500025350131562 1.1149608525221475 0.9124752573325023 1.0383896810359843 1.0481295498054188 1.2363644352958367 1.0153207143638314 1.1373210483949034 0.9498426110342836 1.0 11.258699419222747 TTTLS(ph)GTAPAAGVVPSR ddPTM_A549_PD325901_60min_R1 2 TTTLSGTAPAAGVVPSR 17 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;B5MEG9;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TTT(0.02)LS(0.975)GT(0.005)APAAGVVPSR;T(0.001)TT(0.003)LS(0.993)GT(0.003)APAAGVVPSR 172.91 6.3323e-30 7836000.0 6242.0 7071.3 6087.5 6468.3 6842.4 7189.3 6363.7 6682.1 7290.7 7195.4 7467.0 True False 6875.683244882472 7667.223267729504 6500.6343571112675 6867.832200424858 6361.813428998535 7130.75272440482 6605.874085850259 6548.8202734939605 6984.297233092199 6741.081216025351 6548.606337212934 1.0499460329155685 1.170817556120292 0.9926744748987182 1.0487471450830537 0.9714759295954416 1.0888962257333743 1.0087450284363402 1.0000326689787125 1.066531850205046 1.0293917314465315 1.0 12.676972192178466 -5.772553982799791 24.996841157083757 1.02745307845319 1.1103818107623065 0.39022889698507 0.041847255348168015 139.37389883855462 313455.8169788893 0.005539049678800717 0.017452226819823648 1.6882859925116752e-06 5.772553982799791 0.08292873230911657 TTTPPPSQIPDPPFS(ph)SPITPHR ddPTM_A549_MK2206_60min_R1 2 TTTPPPSQIPDPPFSSPITPHR 22 0 Q6ZS30-1;Q6ZS30 Q6ZS30-1 NBEAL1 Neurobeachin-like protein 1 1 TTTPPPSQIPDPPFS(0.452)S(0.452)PIT(0.095)PHR;TTTPPPSQIPDPPFS(0.51)S(0.403)PIT(0.087)PHR 91.175 5.0633e-07 8023600.0 2783.8 2525.2 3172.5 2756.7 3736.2 3121.8999999999996 2880.5 3062.1000000000004 5214.200000000001 3428.6 4631.200000000001 True False 3253.6373826244567 2653.7218939987365 3622.408204524977 3432.091623752967 3186.609929314214 3452.257385850497 3403.8495642040666 3496.1620522879566 4033.192025366409 2654.076878733883 3481.145225382373 0.9346456904184666 0.7623128948052572 1.0405794558964678 0.9859087747124889 0.9153912643688091 0.9917016275789807 0.9777959102037128 1.0043137605395174 1.1585819505485866 0.7624148683548115 1.0 11.765346285902263 -8.085408426634844 1.4758802222320273 1.0733999942989727 0.9321318909364165 0.0 0.11985478520661415 0.32870433268561894 1.4170322960231025 0.015138999556181585 0.021026265049246186 8.21469745960252e-09 8.085408426634844 -0.14126810336255624 TTTPPPSQIPDPPFS(ph)SPITPHR ddPTM_A549_PD325901_60min_R1 1 TTTPPPSQIPDPPFSSPITPHR 22 0 Q6ZS30-1;Q6ZS30 Q6ZS30-1 NBEAL1 Neurobeachin-like protein 1 1 TTTPPPSQIPDPPFS(0.535)S(0.364)PIT(0.101)PHR 103.53 2.1111e-10 5483700.0 1891.9 1767.3 1641.8 2229.5 2721.6 2248.2 1793.4 2291.7 2231.7 1550.2 2209.2 True False 2083.964295256831 1916.2365733398883 1753.2224209454246 2367.2111514381227 2530.4442050102903 2229.891404588335 1861.6488183861359 2245.990245696128 2137.909409945802 1452.3201074412132 1937.482405272642 1.0756042426943104 0.9890343097439567 0.904897208962634 1.2217974960681046 1.3060475791284447 1.1509221443869293 0.960859728748951 1.1592312991250484 1.1034471353792532 0.7495913787340139 1.0 10.919967493659975 -6.241237259492637 24.995558101372488 1.086351505890721 0.989764177740452 0.07380489780219301 0.14383345624818186 1385.4418951334396 1714168.507439594 0.015827405507068022 0.04181352400483957 5.73802902203041e-07 6.241237259492637 -0.09658732815026894 TTTPPPSQIPDPPFSS(ph)PITPHR ddPTM_A549_PD325901_60min_R1 1 TTTPPPSQIPDPPFSSPITPHR 22 0 Q6ZS30-1;Q6ZS30 Q6ZS30-1 NBEAL1 Neurobeachin-like protein 1 1 TTTPPPSQIPDPPFS(0.167)S(0.805)PIT(0.027)PHR 100.27 2.7915e-10 5209000.0 2103.0 2403.4 2125.8 2782.0 2864.3 3419.8 2762.5 2664.0 2878.6 2162.6 2296.7 True False 2316.495011853225 2605.942952733034 2270.0695714738617 2953.8378216195833 2663.1214492985664 3391.950282631076 2867.628449198005 2610.864430132428 2757.622452601152 2026.0530669283748 2014.2204599808415 1.1500702420008477 1.2937724566445028 1.1270214043478903 1.466491816713886 1.3221598639326189 1.6840015033226992 1.4236914509473708 1.2962158224513625 1.3690767755518587 1.0058745341846274 1.0 10.976005882164936 -10.608386591473947 0.7951827145690106 0.9897747699612149 1.3546160665834306 0.4567787329433449 0.14441648099528304 0.5194315759914568 0.5610043976735839 0.11603289600400304 0.028354547017266685 2.4638451449731762e-11 10.608386591473947 0.36484129662221565 TTTT(ph)PGR ddPTM_A549_PD325901_60min_R1 2 TTTTPGR 7 0 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 T(0.002)TT(0.003)T(0.995)PGR;T(0.012)T(0.012)T(0.049)T(0.926)PGR 76.47800000000001 0.018716999999999998 532600000.0 3904.5 3387.0299999999997 2804.5 3365.2 3465.4 2535.39 2263.8599999999997 2899.0 2839.51 3413.2 4503.4 True False 4300.881965659019 3672.466904882819 2994.8302348285097 3573.060761076286 3222.00225898099 2514.742624445875 2350.0124311317254 2841.1771707784965 2720.1752693620147 3197.689969499642 3949.5103494046784 1.088965867960646 0.92985372362333 0.7582788674752883 0.9046844912344296 0.8157979025087634 0.636722631914341 0.5950136151652191 0.7193745349234888 0.6887373443070063 0.8096421294304594 1.0 11.94745808724962 -5.429304118680422 2.593210649846035 0.8058996422814654 1.10372418865074 0.3919552626446786 0.11493923235895578 0.3978271067424744 4.220139557767551 0.021139871035671654 0.21523264098555536 3.721310268408117e-06 5.429304118680422 0.2978245463692747 TTTT(ph)PGRKPR ddPTM_A549_MK2206_60min_R1 3 TTTTPGRKPR 10 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 T(0.003)T(0.003)T(0.022)T(0.972)PGRKPR;T(0.001)T(0.001)T(0.004)T(0.995)PGRKPR;T(0.005)T(0.005)T(0.027)T(0.963)PGRKPR 76.332 0.00051147 543492000.0 5223.29 6059.900000000001 6148.6900000000005 5563.3099999999995 9156.2 6716.26 6347.1 5710.22 10290.7 9523.1 10020.1 True False 6104.853654820209 6368.323026074349 7020.666699158612 6926.321199746477 7809.335109144793 7426.970175307434 7500.285911806853 6519.661171815327 7959.872880871105 7371.825095919811 7531.83262930858 0.8105402702476984 0.8455210490596045 0.9321325957030867 0.919606361510759 1.0368439519960082 0.9860774317271609 0.9958115482573299 0.8656141861736816 1.0568308236028632 0.9787558299203128 1.0 12.87878522572557 -3.5048926799851143 0.3732393456793064 1.0194409480473807 0.002546711813579962 0.5352748121211898 0.052146943171982305 8.861108241835867 0.30133452462621274 0.013062263402889658 5.392662085456892 0.00031268519588877633 3.5048926799851143 -1.0168942362338007 TTTT(ph)PGRKPR ddPTM_A549_PD325901_60min_R1 3 TTTTPGRKPR 10 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 TTT(0.003)T(0.997)PGRKPR;T(0.002)T(0.002)T(0.017)T(0.979)PGRKPR;T(0.002)T(0.002)T(0.018)T(0.977)PGRKPR 77.062 0.00049355 1059341200.0 6036.3 5393.92 5756.6 5944.6 6477.6 7718.349999999999 6414.5199999999995 7168.55 7016.9800000000005 7292.7 7399.6 True False 6649.100732310807 5848.484568363888 6147.277493247919 6311.7844408338515 6022.635722506857 7655.4943166107905 6658.62806876003 7025.567646631317 6722.080732805262 6832.237677420032 6489.496109929131 1.0245943012643888 0.9012232181502542 0.9472657644161914 0.9726154903115859 0.9280590696852467 1.17967469075105 1.0260624177849682 1.0826060340620252 1.0358401667766268 1.0528148197772236 1.0 12.663890746256486 TTVEPT(ph)PGKGPK ddPTM_A549_MK2206_60min_R1 1 TTVEPTPGKGPK 12 1 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 TT(0.001)VEPT(0.999)PGKGPK 82.90799999999999 0.00024155 10067000.0 2933.6 3360.8 3123.1 3149.9 4835.0 3716.3 3604.3 3492.0 5468.4 5894.1 5415.5 True False 3428.7199603660847 3531.850364862566 3566.0025417027437 3921.6256414043855 4123.777904885769 4109.556399319714 4259.154655185111 3987.0016938014905 4229.8161312403945 4562.618716369771 4070.681889803555 0.8422962179762835 0.867631139075082 0.8760209316859279 0.9633829779790622 1.013043518633871 1.0095498765485786 1.046300047629281 0.9794431993785437 1.0390927725979884 1.1208487520969015 1.0 11.99105476874513 -6.357608062658018 1.7939850200221275 1.017550296185346 0.8526004752497399 0.8062913814255993 0.0357859951023221 0.06519377537235295 0.40157930088100574 0.0027946245516069306 0.008926340013876622 4.3892663680530593e-07 6.357608062658018 -0.16494982093560606 TTYDS(ph)AEEENKENLYAGK ddPTM_A549_MK2206_60min_R1 2 TTYDSAEEENKENLYAGK 18 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 TTYDS(1)AEEENKENLYAGK;T(0.002)TYDS(0.998)AEEENKENLYAGK 226.12 1.2503999999999997e-64 98535000.0 17349.0 18997.5 16450.5 15793.3 24157.0 20763.1 18847.3 21605.5 25604.0 24450.0 23914.0 True False 20277.08705767359 19964.39160511682 18783.42826431464 19662.659208988178 20603.53730058439 22960.23746056969 22271.610446597224 24668.14578906875 19804.734881186294 18926.72801873752 17975.493807176117 1.1280406132475003 1.1106449602595452 1.0449464401815756 1.0938591962986026 1.146201463036254 1.2773077450258183 1.238998532418955 1.3723208971995424 1.1017630499407984 1.052918391103206 1.0 14.133743783225352 -9.413424284380998 1.837568471567801 1.0300834386077296 1.1716297274717415 0.2746804167148177 0.09020895411007734 0.29540612866766974 2.0331745630932634 0.021935528383851502 0.018643002588614593 3.8598969981230707e-10 9.413424284380998 0.141546288864012 TTYDS(ph)AEEENKENLYAGK ddPTM_A549_PD325901_60min_R1 2 TTYDSAEEENKENLYAGK 18 1 E7ESG2;Q9HAW4-2;Q9HAW4;Q9HAW4-3 E7ESG2 CLSPN Claspin 1 TTYDS(1)AEEENKENLYAGK;TTYDS(1)AEEENKENLYAGK 236.5 7.369899999999999e-75 119956000.0 16954.3 17312.7 17945.1 19829.4 21415.3 20593.8 18072.2 19192.6 20845.0 21148.9 21598.0 True False 18675.488054904003 18771.701987925924 19162.96239865254 21054.217002165133 19911.16320677428 20426.090920652623 18759.94746048729 18809.788536696575 19968.95714044013 19813.554844706145 18941.582921002402 0.9859518147343771 0.9910313233173288 1.011687485601041 1.1115341885614134 1.0511879228792862 1.0783729641731368 0.9904107559926412 0.9930420606949542 1.0542390899283594 1.046034796951257 1.0 14.209269279355537 -11.091254840655191 1.4090435555946161 0.9999332389714394 1.0333562717570568 0.0 0.041393924466196115 0.9510868638680896 3.362467419414199 0.02993523632675021 0.006492994261285992 8.104853317444336e-12 11.091254840655191 0.033423032785617424 TVAISDAAQLPHDY(ph)CTTPGGT(ph)LFSTTPGGTRIIYDR ddPTM_A549_MK2206_60min_R1 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDR 36 1 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.282)CT(0.267)T(0.267)PGGT(0.268)LFS(0.268)T(0.268)T(0.268)PGGT(0.058)RIIY(0.054)DR 47.049 0.004039 5308300.0 626.94 580.56 454.52 612.75 659.22 594.02 393.19 734.08 831.81 1029.6 1046.7 True False 732.7521447886264 610.1080242277474 518.9777705660186 762.8737775073926 562.2496112634536 656.8788021214367 464.62753346620264 838.1380880257151 643.4063631276194 797.0126449117446 786.7755025496043 0.9313357398827097 0.7754537631772305 0.6596262452049317 0.9696206542212404 0.7146252132170385 0.8348999174386751 0.5905465179845365 1.0652823903510804 0.817776304730655 1.013011516409657 1.0 9.619808227588914 -10.89016587704103 0.3792905168337029 1.0728429847329644 0.796298791000353 0.25092329226312116 0.12916840514839198 3.1113943714469623 0.5148707577904402 0.35298467726408067 0.03989788103616323 1.2877576038820878e-11 10.89016587704103 -0.2765441937326114 TVAISDAAQLPHDY(ph)CTTPGGT(ph)LFSTTPGGTRIIYDR ddPTM_A549_PD325901_60min_R1 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDR 36 1 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.33)CT(0.311)T(0.311)PGGT(0.241)LFS(0.241)T(0.241)T(0.241)PGGT(0.042)RIIY(0.044)DR 54.583 0.00203 14591000.0 784.52 744.52 706.57 922.54 870.45 589.69 678.35 1144.7 915.75 640.3 975.61 True False 864.1638928669005 807.2633132931669 754.5220891505719 979.5232005596441 809.3125948894797 584.8877601510966 704.1649804573634 1121.8680605002226 877.2642121064072 599.8713487257186 855.6161549013414 1.0099901549504342 0.9434876944162539 0.8818464738286453 1.1448161596160957 0.9458827889742207 0.6835866256154762 0.8229916843243319 1.311181484914321 1.0253011319165215 0.7010986705772146 1.0 9.740819912081356 TVAISDAAQLPHDYCT(ph)T(ph)PGGTLFSTTPGGTRIIYDR ddPTM_A549_MK2206_60min_R1 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDR 36 1 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.292)CT(0.306)T(0.306)PGGT(0.247)LFS(0.247)T(0.247)T(0.247)PGGT(0.053)RIIY(0.055)DR 49.312 0.0030122 5664500.0 416.64 673.86 635.25 794.29 765.28 419.02 730.55 709.89 935.23 965.42 1205.2 True False 486.95864612998577 708.1565957112267 725.3380021826611 988.8910856570327 652.708325760286 463.3604182770349 863.2814786076314 810.5190814469472 723.4018982554229 747.3309514866907 905.9155781721438 0.5375320370497625 0.7817026362876623 0.8006684283387286 1.0915929800570465 0.7204957520183599 0.5114830006698331 0.9529381096961211 0.8946960411943935 0.7985312491424678 0.8249454689746835 1.0 9.823232802267846 -14.999999999999607 0.14765979257932804 1.7526221122229602 0.7198046494545546 0.08233776135444926 0.16226139011600751 75.31336683195074 0.7356837244778015 16.578408945387064 0.3156568672040625 1.000000000000904e-15 14.999999999999607 -1.0328174627684055 TVAISDAAQLPHDYCTT(ph)PGGT(ph)LFSTTPGGTR ddPTM_A549_PD325901_60min_R1 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.006)CT(0.42)T(0.461)PGGT(0.342)LFS(0.27)T(0.251)T(0.204)PGGT(0.046)R 71.907 0.00046322 5760200.0 2475.1 2068.6 2485.9 2117.5 2612.2 2627.1 2352.0 2363.3 2027.3 2355.4 2717.7 True False 2726.370329927682 2242.928181752332 2654.6081229310707 2248.2931658085777 2428.7280836007803 2605.7057686122275 2441.506647063783 2316.162127527016 1942.0996311256563 2206.67964202492 2383.4401289197267 1.1438803504426123 0.9410465799151077 1.1137716826703965 0.9432975213132779 1.0190010876008788 1.0932541317046804 1.0243624823797755 0.9717727327922417 0.8148304660817706 0.9258380838897255 1.0 11.218829670591825 -8.439604198395966 3.9370471586893556 0.9118368395025637 1.035839418198249 0.3716720080630028 0.0719242893443303 0.21306607976885558 6.165971741170845 0.014025827295236082 0.016884315577367998 3.634091029118578e-09 8.439604198395966 0.12400257869568543 TVAISDAAQLPHDYCTT(ph)PGGT(ph)LFSTTPGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRK 37 2 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 T(0.001)VAIS(0.001)DAAQLPHDY(0.112)CT(0.397)T(0.417)PGGT(0.283)LFS(0.252)T(0.243)T(0.235)PGGT(0.046)RIIY(0.015)DRK 43.412 0.0096368 4315800.0 1632.9 1248.4 1777.8 1989.3 1709.2 1753.6 1682.7 2433.1 1621.9 2094.5 2322.1 True False 1798.6708059225548 1353.6070492601807 1898.4521987798623 2112.1745429719026 1589.1516884198954 1739.3192630042263 1746.7360693087724 2384.569911769975 1553.7371833091797 1962.2529125503945 2036.496421004709 0.8832182504083054 0.6646744061511173 0.9322148466351136 1.0371609403221331 0.7803361066727948 0.8540743038213297 0.8577162480094206 1.17091780136473 0.7629461889958249 0.9635435114500784 1.0 10.991873563573366 -11.174723190324464 1.574441920353907 1.0001253753759838 0.8677660567988242 0.06916087079509714 0.13007441754928398 0.7036157349282589 3.1272153776089113 0.09586165516186478 0.02014096631990954 6.687700409525229e-12 11.174723190324464 -0.13235931857715955 TVAISDAAQLPHDYCTT(ph)PGGTLFS(ph)TTPGGTR ddPTM_A549_PD325901_60min_R1 1 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.004)CT(0.483)T(0.514)PGGT(0.265)LFS(0.282)T(0.233)T(0.194)PGGT(0.024)R 74.868 2.3425e-05 5504500.0 1130.7 942.9 1179.3 1038.3 1093.2 1247.4 851.53 1335.4 966.5 1306.1 1247.1 True False 1245.4878316226543 1022.3614921078374 1259.3343897069926 1102.4334328496097 1016.4174033352617 1237.2415879741525 883.9354401250955 1308.764399398967 925.8813660942857 1223.6326230995799 1093.7146060182474 1.1387685825619072 0.9347607561261557 1.1514287024946086 1.0079717567849842 0.9293259848065921 1.131228915812349 0.8081956986412853 1.1966233167202778 0.8465475005998396 1.1187860309869218 1.0 10.095020614934441 -7.3516104519176855 0.6456926875714242 0.9385297619477795 1.0621013173408271 0.0 0.13146050023392764 1.1981731977710666 0.967282375633286 0.024306503375980802 0.06577768551015971 4.4503026623097096e-08 7.3516104519176855 0.12357155539304765 TVANLLSGKS(ph)PR ddPTM_A549_MK2206_60min_R1 4 TVANLLSGKSPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 TVANLLSGKS(1)PR;TVANLLSGKS(1)PR;TVANLLSGKS(1)PR;TVANLLSGKS(1)PR 149.37 3.4541e-12 1733649000.0 19301.1 21454.7 24121.0 19773.0 29727.9 21794.6 21196.100000000002 22305.199999999997 29983.0 29422.600000000002 32185.0 True False 22558.653813410765 22546.65258956706 27541.720504758727 24617.38588764369 25354.96529031101 24100.890105915405 25047.15700323757 25467.03040681012 23191.898373012365 22776.014225116847 24192.576239188897 0.9324618259079253 0.9319657553892235 1.138436858995804 1.0175595043807966 1.048047344756909 0.9962101542073485 1.0353240909773125 1.0526795557042317 0.9586369861447183 0.9414464172783137 1.0 14.562276787957819 -8.77022179665054 24.996906382872343 0.980467466899596 1.020853300295739 0.13522002741033534 0.05600376829289387 338.50609737856513 963466.2804748991 0.009598522191743892 0.01029221540678449 1.6973765712448065e-09 8.77022179665054 0.04038583339614299 TVANLLSGKS(ph)PR ddPTM_A549_PD325901_60min_R1 4 TVANLLSGKSPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 TVANLLSGKS(1)PR;TVANLLS(0.029)GKS(0.971)PR;TVANLLSGKS(1)PR;TVANLLSGKS(1)PR 183.41 2.9573e-19 3420899000.0 27071.300000000003 28949.2 25985.9 31499.799999999996 33754.5 28867.6 29928.5 30141.7 36001.100000000006 32633.300000000003 31399.8 True False 29819.558447162253 31388.850681226235 27749.459439910905 33445.471104763674 31383.700366703357 28632.511836622263 31067.445445003614 29540.500147793795 34488.09896419763 30572.827868766177 27537.82365973198 1.082858210424479 1.139845002607288 1.0076852761784656 1.2145284797385907 1.1396579756807408 1.0397521674340235 1.1281735923973153 1.0727245737647122 1.2523901449274257 1.110212202915375 1.0 14.749126925972973 TVANLLSGKS(ph)PRK ddPTM_A549_MK2206_60min_R1 4 TVANLLSGKSPRK 13 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 TVANLLS(0.001)GKS(0.999)PRK;TVANLLS(0.043)GKS(0.957)PRK;TVANLLS(0.026)GKS(0.974)PRK;TVANLLS(0.121)GKS(0.879)PRK 141.55 5.442100000000001e-13 111059200.0 7974.0 10348.599999999999 11376.0 10018.2 11540.9 8931.5 9193.400000000001 7915.4 12909.6 14339.2 15386.9 True False 9319.816254417492 10875.299537555567 12989.287859630002 12472.659449734087 9843.248898137786 9876.625401750127 10863.721778702886 9037.432189895848 9985.596212395032 11099.964760993089 11565.90807316376 0.8058006509702555 0.9402892940839981 1.123066842435735 1.0783986325011738 0.8510571617784998 0.8539429277210618 0.9392882694537276 0.7813854418284107 0.863364653188321 0.959714074396649 1.0 13.497590920164276 -6.772291474986554 24.998901019971466 0.9113885008253424 0.99328732630672 0.1676892470986926 0.09494469004315308 355.76848666522494 819549.8683207559 0.01516612434385703 0.028863045644971275 1.689306779676356e-07 6.772291474986554 0.08189882548137761 TVANLLSGKS(ph)PRK ddPTM_A549_PD325901_60min_R1 3 TVANLLSGKSPRK 13 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 TVANLLS(0.025)GKS(0.975)PRK;TVANLLS(0.004)GKS(0.996)PRK;TVANLLS(0.168)GKS(0.832)PRK 126.63 1.6736e-07 126750000.0 10950.5 11400.2 12045.6 13038.9 14054.800000000001 16607.5 15037.100000000002 15411.4 15187.4 12534.599999999999 15104.3 True False 12062.186698667972 12360.934863005376 12863.086852077116 13844.28323950955 13067.639334427784 16472.254026199073 15609.345069116853 15104.007536990583 14549.126393606162 11743.163216831777 13246.566854046518 0.9105896517619775 0.9331425266033665 0.9710506121174893 1.0451223620466192 0.9864925363990387 1.2435111835159902 1.178369100545366 1.14022053437768 1.0983318586552668 0.8865061676901222 1.0 13.693330880778134 -6.211612576720024 1.429658547520578 1.0765336323814088 0.9156204768928206 0.3175529032586665 0.0914433712809706 0.39887076057483084 1.4837269861819078 0.012605552263574828 0.05434205143214225 6.143097712358957e-07 6.211612576720024 -0.1609131554885882 TVANLLSGKSPR ddPTM_A549_MK2206_60min_R1 2 TVANLLSGKSPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 0 ; 109.44 9.9345e-05 24467000.0 5917.1 7954.9 7663.1 7468.7 10709.0 7949.6 7899.200000000001 6970.299999999999 11141.8 9929.6 10506.099999999999 False True 6915.761820794306 8359.77043187492 8749.84280917111 9298.531835282687 9133.720286126516 8790.821395482602 9334.382391099036 7958.361370648485 8618.20008979852 7686.496463593301 7897.145416390943 0.8757293244772062 1.0585812962901473 1.1079753946293491 1.1774548074020637 1.1565850449162296 1.1131644324589474 1.1819944928106594 1.0077516559503241 1.091305735856274 0.9733259371974551 1.0 12.94711554075596 -10.534871846102115 0.6621783849274038 0.9943560818284441 1.0935131596031435 0.16515550338542062 0.08323076603945907 1.4066445948718402 1.0094235422505085 0.07713246076879421 0.01732920799704258 2.918288030725604e-11 10.534871846102115 0.0991570777746994 TVANLLSGKSPR ddPTM_A549_PD325901_60min_R1 1 TVANLLSGKSPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 0 69.86399999999999 0.0034220999999999995 6899100.0 1863.9 2142.1 2358.1 2038.9 2213.2 2723.2 2540.6 2689.9 2452.6 2334.5 3025.3 False True 2053.121755869343 2322.6222847006047 2518.1348464072407 2164.838222322131 2057.752467125504 2701.023162074081 2637.2839232696633 2636.247834314272 2349.5257511462437 2187.099271591737 2653.2072789567815 0.7738263693730755 0.8754017460761075 0.9490908857288187 0.8159325656506291 0.7755716952256346 1.0180219176603873 0.9939984501725855 0.9936079458333246 0.8855417252096704 0.8243228069431823 1.0 11.373521673625463 -7.264099994139554 24.995562610611834 0.9571717161320157 0.8449941662316777 0.3986175526331165 0.06973337029335949 181.8649877226872 1708562.2059339387 0.00985196740975375 0.01619021933854256 5.443772982525715e-08 7.264099994139554 -0.11217754990033801 TVAQQHDEDGIEEEDDDDDEIDDDDT(ph)ISDWNLRK ddPTM_A549_PD325901_60min_R1 1 TVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRK 34 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 1 TVAQQHDEDGIEEEDDDDDEIDDDDT(0.824)IS(0.176)DWNLRK 148.47 2.7999e-40 9253300.0 1550.5 1235.4 1337.0 1534.6 1568.7 1610.7 1248.9 1318.8 1790.1 1435.4 1497.6 True False 1707.9056185822271 1339.5114936366774 1427.7368600341301 1629.388756670529 1458.5199237212098 1597.582993225883 1296.427572924303 1292.4954994214136 1714.8683222404366 1344.768599033103 1313.40469406858 1.3003650940911347 1.0198771937438609 1.0870502187801532 1.2405839297125656 1.1104878262640445 1.2163676591386268 0.9870739603559002 0.9840801584297713 1.3056663570526983 1.0238798483865366 1.0 10.359095801172316 -5.23421319335344 22.5462878472196 1.126003146504405 1.300366008441345 0.1812123409302807 0.10968698007372712 3683.304940974614 3049997.889282181 0.01741311064579476 1.6792874546695848 5.831587637880401e-06 5.23421319335344 0.17436286193694017 TVART(ph)PLGQR ddPTM_A549_MK2206_60min_R1 4 TVARTPLGQR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.021)VART(0.979)PLGQR;TVART(1)PLGQR;T(0.033)VART(0.967)PLGQR;TVART(1)PLGQR 78.83 0.0011966 702421000.0 13544.4 14362.8 13621.8 11963.7 15861.4 13327.300000000001 11731.9 12365.0 17631.3 17753.6 18890.7 True False 15830.363591212983 15093.805171521086 15553.576069471505 14894.807037070905 13528.209071469522 14737.586040054251 13863.434369826666 14117.776616224348 13637.838701400548 13743.049429589311 14199.61783320322 1.1148443413875944 1.0629726341104035 1.0953517377842592 1.0489583038102697 0.9527164202853594 1.0378861046241041 0.9763244710297448 0.994236378898346 0.9604370245451921 0.9678464301661481 1.0 13.793564481282088 -6.569595622090943 4.372259139010046 0.9843171528841215 1.086606570218938 0.7886712135689109 0.024576020088102012 0.06912523568275357 2.8546285605033757 0.0035035930399460527 0.007656438782298821 2.6940420982400724e-07 6.569595622090943 0.10228941733481656 TVART(ph)PLGQR ddPTM_A549_PD325901_60min_R1 4 TVARTPLGQR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TVART(1)PLGQR;TVART(1)PLGQR;TVART(1)PLGQR;TVART(1)PLGQR 93.166 0.00054239 1888309000.0 21384.199999999997 21902.5 21959.5 21273.7 26812.300000000003 21051.1 22670.300000000003 21992.0 20914.4 22863.3 24852.8 True False 23555.10824178399 23748.30054183043 23449.80372320081 22587.728132921824 24929.09654541353 20879.66682106995 23533.030672164157 21553.352307609766 20035.44049978513 21419.7073361248 21796.06315487956 1.0807047160032945 1.089568348792099 1.0758733610088214 1.0363214665151597 1.1437430864588298 0.9579558782107651 1.0796918005303051 0.9888644639380457 0.9192229054126101 0.9827328533561115 1.0 14.411779955843528 -7.950579414735444 1.1628604192543566 0.9624552933402098 1.077578271159131 0.47680113775106514 0.04672605091376342 0.2688745897491871 0.7288047879817299 0.008813099993990589 0.013290772556651266 1.1205225095677898e-08 7.950579414735444 0.11512297781892122 TVAS(ph)DLQK ddPTM_A549_MK2206_60min_R1 1 TVASDLQK 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 T(0.145)VAS(0.855)DLQK 70.977 0.006343 6541000.0 2369.8 3668.2 2352.9 3007.3 3552.8 3407.9 2706.4 3097.1 3412.1 3397.2 4079.2 True False 2769.764303952669 3854.8957118510084 2686.576600292143 3744.088635002826 3030.187826365703 3768.521716019063 3198.1178477909675 3536.1234094709575 2639.2647980040533 2629.7701605421325 3066.222059807343 0.9033149752130798 1.2572134818223892 0.8761846167335141 1.221075500069318 0.9882480026760019 1.2290439643682711 1.0430157325239229 1.1532509193718146 0.8607546180689482 0.8576580916997794 1.0 11.582246467301943 -8.759655787421108 24.99999209681444 0.9342452356373687 1.0876274305659954 0.27302627826955994 0.12685306826854323 46.388836420805625 650215.2076080517 0.01957397794875974 0.02163864327442691 1.7391787187341809e-09 8.759655787421108 0.1533821949286267 TVAS(ph)DLQK ddPTM_A549_PD325901_60min_R1 1 TVASDLQK 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 T(0.007)VAS(0.993)DLQK 74.84100000000001 0.0049503 10250000.0 4995.7 4498.4 3518.0 3918.8 4732.1 4557.7 3599.7 4061.0 3971.7 4509.6 5187.1 True False 5502.859786360036 4877.495955136175 3756.7526354525558 4160.855375759464 4399.7336208587585 4520.583602300619 3736.688553331424 3980.000169207129 3804.783260958794 4224.863086386848 4549.119583736068 1.2096537989534861 1.0721845986581915 0.8258197144088344 0.9146506921109043 0.9671615660728304 0.9937271419424825 0.8214091725991919 0.8748946023393966 0.8363779388349314 0.92872104340618 1.0 12.151371644241182 -5.543323993032105 4.248403793631052 0.9138377734537292 1.186972061144254 0.6992917156751028 0.06170120080043508 0.09380417207896928 3.8714773763500823 0.010301695818959396 0.05131050174469921 2.862042028315116e-06 5.543323993032105 0.27313428769052484 TVAT(ph)PLNQVANPNSAIFGGAR ddPTM_A549_MK2206_60min_R1 2 TVATPLNQVANPNSAIFGGAR 21 0 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 1 TVAT(1)PLNQVANPNSAIFGGAR;T(0.001)VAT(0.999)PLNQVANPNSAIFGGAR 109.66 4.3162e-10 5497400.0 1371.51 1342.47 1564.52 1244.25 1672.87 1525.26 989.55 1381.6399999999999 2081.25 1605.9699999999998 1870.1599999999999 True False 1602.9873577998662 1410.7959888470157 1786.392461510928 1549.0913058565054 1426.7930390374897 1686.6620008143527 1169.338426057328 1577.4917010950423 1609.8501980733072 1243.1802616053947 1405.7476582097713 1.140309463393509 1.0035912068625983 1.2707774763686324 1.1019696862446018 1.0149709520800625 1.1998326946973739 0.8318266932391607 1.1221727398102075 1.145191449312789 0.8843552072415277 1.0 10.45712192820311 -6.525881068557683 24.547647131469553 1.0627894053305753 1.135031060131148 0.10598794464321637 0.11917915385040785 142.23649970152553 1162961.1495845742 0.015012949459009984 0.031399478431869805 2.9793322071520847e-07 6.525881068557683 0.07224165480057265 TVAT(ph)PLNQVANPNSAIFGGAR ddPTM_A549_PD325901_60min_R1 2 TVATPLNQVANPNSAIFGGAR 21 0 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 1 T(0.001)VAT(0.999)PLNQVANPNSAIFGGAR;T(0.004)VAT(0.996)PLNQVANPNSAIFGGAR 136.96 6.873600000000001e-18 7525100.0 2404.61 2803.2 2672.3 2949.6 3096.9 2414.3199999999997 3249.5 3549.2 2509.19 2520.8 3258.8999999999996 True False 2648.7242370196786 3039.4355018312576 2853.658347845328 3131.7900929723673 2879.3844277250023 2394.658578385245 3373.1615006946304 3478.4084217064624 2403.7374702432717 2361.6362577975815 2858.075959869188 0.9267508191562931 1.0634551161370709 0.9984543405823049 1.0957686698836748 1.007455528878522 0.8378568701494018 1.1802210816149958 1.2170454776386233 0.8410334448750232 0.8263028313305122 1.0 11.480828544507402 -8.802520883831594 24.999994343376123 0.9249324997904168 1.0388085181326663 0.25769088421240893 0.11019405214277099 190.6614586805865 116025.54783427747 0.019780379918627872 0.021057424763109605 1.5757202495786794e-09 8.802520883831594 0.11387601834224947 TVAT(ph)PLNQVANPNSAIFGGARPR ddPTM_A549_MK2206_60min_R1 1 TVATPLNQVANPNSAIFGGARPR 23 1 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 1 T(0.026)VAT(0.974)PLNQVANPNSAIFGGARPR 73.34100000000001 5.054899999999999e-05 5286600.0 1061.9 1294.3 1381.7 1159.9 1790.3 1399.6 1216.6 1148.4 2163.9 1554.5 1578.6 True False 1241.1227590376143 1360.1743415977214 1577.64583646719 1444.07555206989 1526.9492415960701 1547.70474302071 1437.640472074525 1311.1892168274999 1673.780105038237 1203.3373703528614 1186.5900528564105 1.0459574947977446 1.1462883397037178 1.3295626679740096 1.2169961720087314 1.286838059968843 1.304329780360967 1.2115730016561113 1.105006074904428 1.4105799227029097 1.0141138192218417 1.0 10.212605878560428 -11.09011490727907 1.426955828226875 1.0003344506124099 1.2519481877810024 0.3988652943685921 0.1015390720452292 0.3326992653345091 1.212942373504699 0.07909894430393423 0.017420474674239142 8.126154828356636e-12 11.09011490727907 0.2516137371685925 TVAT(ph)PLNQVANPNSAIFGGARPR ddPTM_A549_PD325901_60min_R1 2 TVATPLNQVANPNSAIFGGARPR 23 1 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 1 T(0.006)VAT(0.994)PLNQVANPNSAIFGGARPR;T(0.033)VAT(0.967)PLNQVANPNSAIFGGARPR 90.97399999999999 3.7841999999999997e-07 29854000.0 4398.5 4088.0 4449.3 5176.700000000001 5685.2 5756.0 5421.700000000001 5672.0 5682.4 5366.4 5492.5 True False 4845.032481995443 4432.510106837248 4751.2562538143975 5496.453001861287 5285.891164875261 5709.125044395719 5628.025760368077 5558.8675104020795 5443.588489078297 5027.564588164443 4816.957319826178 1.005828401687038 0.9201887856870604 0.9863604633278853 1.1410632556859832 1.0973506331723124 1.1852139567227338 1.1683777510761018 1.1540205032588235 1.1300885865591874 1.043722054059193 1.0 12.233906425786914 -6.134512684050217 5.427643706661067 1.0924393137868984 0.9610859115009789 0.5308959835897156 0.057754595769205545 0.18702469240304295 7.480495540530967 0.010397378121054754 0.028295451577778557 7.336472871257937e-07 6.134512684050217 -0.13135340228591952 TVCSTY(ph)LQSR ddPTM_A549_MK2206_60min_R1 2 TVCSTYLQSR 10 0 Q9H422-2;Q9H422 Q9H422-2 HIPK3 Homeodomain-interacting protein kinase 3 1 TVCST(0.001)Y(0.999)LQSR;TVCS(0.007)T(0.004)Y(0.989)LQSR 140.45 7.0017e-08 7670000.0 5414.9 5567.5 4302.2 5899.4 5596.5 4241.8 3706.6000000000004 4150.1 6219.1 6929.799999999999 7187.8 True False 6328.802738405478 5850.861969284801 4912.3166516965675 7344.753264834131 4773.262263638721 4690.664460521042 4380.041240992464 4738.389384148213 4810.483779861964 5364.3533670448805 5402.870886811931 1.1713777491617814 1.0829172289803164 0.9092048939550312 1.3594167654019298 0.8834677643861443 0.8681800025928178 0.8106877496709888 0.8770132552518188 0.8903569751415036 0.9928709161158988 1.0 12.399510490747033 TVDGPSGK ddPTM_A549_MK2206_60min_R1 2 TVDGPSGK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 151.04 0.0016836 87843000.0 20530.8 17548.7 14747.2 11743.8 20496.4 19661.3 20430.3 20855.3 20507.6 24578.0 24571.0 False True 23995.897110132275 18441.853873441964 16838.574711984475 14621.031527199219 17481.406711416905 21741.845715885334 24142.22105591332 23811.60264167759 15862.66134390782 19025.812729837675 18469.342574898565 1.299228546594007 0.9985116578272818 0.9117040654641143 0.7916378976623925 0.9465094190832569 1.1771856863727452 1.3071510779557842 1.2892501476495226 0.8588644278798829 1.030129397009258 1.0 14.17284489336228 TVDGPSGK ddPTM_A549_PD325901_60min_R1 2 TVDGPSGK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 150.35 0.0017719 155760000.0 31863.0 30100.0 23788.4 24021.0 27485.0 23391.3 20832.4 23214.6 23943.3 29512.0 37748.0 False True 35097.708303699146 32636.63263595919 25402.823875269936 25504.722614350838 25554.548418102524 23200.80900816079 21625.1883819267 22751.566591498595 22937.04636606862 27648.607283450587 33105.23530428739 1.060186039491878 0.9858450585225863 0.7673355480418552 0.7704135729567757 0.771918646196513 0.7008199396533547 0.6532256358596571 0.6872498075418327 0.6928525399454899 0.835173259737256 1.0 15.014771764264271 -5.652961982173311 4.3040686019220065 0.8018560328255137 1.0432906087267395 0.4925662113065131 0.09613760696337648 0.20299433435984082 6.453664522973978 0.01918451403176847 0.0825493650824898 2.2235045261196757e-06 5.652961982173311 0.24143457590122586 TVDGS(ph)PMMK ddPTM_A549_MK2206_60min_R1 2 TVDGSPMMK 9 0 O75781-2;O75781;A0A087WWY4;A0A087WTK8 O75781-2 PALM Paralemmin-1 1 T(0.001)VDGS(0.999)PMMK;T(0.001)VDGS(0.999)PMMK 52.57899999999999 0.0066915 18973400.0 4398.5 5224.3 4211.7 4517.200000000001 5564.7 4359.4 4291.4 4926.9 6522.200000000001 7525.5 8106.4 True False 5140.8592669996715 5490.194555210518 4808.982390858269 5623.9142027848175 4746.140001513515 4820.708814464478 5071.091831218655 5625.303162998439 5044.932113813203 5825.48432331326 6093.357154741675 0.8436825770173677 0.9010130894655021 0.7892172194626829 0.9229582412395521 0.7789039573726949 0.791141679708228 0.8322328237845827 0.9231861878670594 0.8279396703157933 0.9560385474499941 1.0 12.573021589316262 -10.857798646738278 0.6459509652627446 1.025495191634164 0.8425480153829146 0.5028875014385359 0.05022909723240804 0.6198848576833474 0.3523937461345546 0.06650041311437918 0.009585239060651842 1.3873989237317457e-11 10.857798646738278 -0.18294717625124934 TVDGS(ph)PMMK ddPTM_A549_PD325901_60min_R1 4 TVDGSPMMK 9 0 O75781-2;O75781;A0A087WWY4;A0A087WTK8 O75781-2 PALM Paralemmin-1 1 TVDGS(1)PMMK;TVDGS(1)PMMK;T(0.003)VDGS(0.997)PMMK;TVDGS(1)PMMK 116.77 0.00018751 35956000.0 13654.5 12988.599999999999 13923.0 14237.7 17532.4 16674.7 15184.3 14881.099999999999 16983.1 16273.9 17731.7 True False 15040.694788088378 14083.19490549566 14867.898505800435 15117.130392837209 16300.984707496473 16538.906771679172 15762.146845667787 14584.284786502878 16269.359367321134 15246.363176678857 15550.813310507385 0.9671966660371178 0.9056243312997602 0.9560849461008243 0.9721118819311435 1.048240010474707 1.0635396645463007 1.0135898702492692 0.9378470756026991 1.04620633290789 0.980422237232903 1.0 13.924702415104795 -6.493352396751432 3.0836440406291303 1.0198458636704957 0.9396755142445276 0.4085517348238661 0.03632200751232517 0.16647014913758443 3.186109728922501 0.00517711888908399 0.01251735670682652 3.2110539566008e-07 6.493352396751432 -0.08017034942596812 TVDLKPDWGK ddPTM_A549_PD325901_60min_R1 1 TVDLKPDWGK 10 1 P31948;P31948-2;P31948-3;F5H783;F5GXD8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 60.434 0.0080973 2470300.0 2523.7 2352.7 2196.3 2481.9 3282.5 3296.3 2555.8 2832.2 3643.0 2991.1 3639.6 False True 2779.904166150255 2550.9702858013693 2345.3541254248007 2635.2013261961347 3051.9485240102454 3269.456025684783 2653.062367587422 2775.7095491820805 3489.8973788737553 2802.2414355356823 3191.9522733253266 0.870910316981085 0.7991881041328378 0.7347710506277235 0.825576669243498 0.9561385204643967 1.0242809872212513 0.8311723172550769 0.8695961942721622 1.0933425941353547 0.8779083130263569 1.0 11.64022336493424 -7.477415028471351 0.5638689017053621 1.0400488852775764 0.7915537978614032 0.18157050865881497 0.09288175479463445 0.5281121851832381 0.3285558552688835 0.021085422245020823 0.05470549616694008 3.331079298906576e-08 7.477415028471351 -0.2484950874161732 TVDNFVALATGEK ddPTM_A549_MK2206_60min_R1 2 TVDNFVALATGEK 13 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 148.68 3.1357e-12 8544600.0 4445.6 4940.2 4574.4 4595.8 6807.6 4974.799999999999 4539.3 4707.7 8083.099999999999 6136.9 6481.5 False True 5195.908595515227 5191.635078699734 5223.118704737292 5721.771206313299 5806.211057973192 5501.2300339950225 5364.032052349079 5375.030891726595 6252.290756058311 4750.570027737844 4871.964669700255 1.066491435750683 1.0656142707658727 1.0720764740395052 1.1744278939250452 1.1917596804597548 1.1291604941653821 1.100999784688319 1.1032573625081912 1.2833202167787845 0.9750830208771033 1.0 12.250287955871634 -6.182170390872965 7.845836305117021 1.1379000704653828 1.067261607706325 0.04168029680043717 0.08177884372765655 0.6298197035835594 56.26235569657221 0.013878325913440775 0.03692258919799169 6.57399862828922e-07 6.182170390872965 -0.07063846275905772 TVDNFVALATGEK ddPTM_A549_PD325901_60min_R1 2 TVDNFVALATGEK 13 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 182.02 1.2340999999999999e-24 11859100.0 11416.5 13374.0 14262.4 12464.5 13884.900000000001 12860.8 15190.900000000001 13367.4 12275.099999999999 13531.2 15022.4 False True 12575.494675616894 14501.073916057088 15230.332230778442 13234.403856066605 12909.672524304598 12756.065908784656 15768.998012279435 13100.776720477561 11759.220234810107 12676.83772275096 13174.740034839648 0.9545155837885155 1.100672489757676 1.1560252567035805 1.0045286526390032 0.9798806268788532 0.9682214506739535 1.1969115117702103 0.9943859754221718 0.8925580469681906 0.9622078074579066 1.0 13.68548687430394 -8.518415701717496 24.73360313076799 0.9489587001195879 1.0529604523558767 0.2520447350297549 0.07636091182272163 171.973719444085 953058.9931494043 0.01347226699128686 0.015469245571860869 3.0309885676036976e-09 8.518415701717496 0.10400175223628871 TVDS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TVDSPK 6 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 T(0.03)VDS(0.97)PK;T(0.012)VDS(0.988)PK 82.56299999999999 0.041607 61111000.0 9526.1 7087.8 6335.299999999999 5325.7 7805.299999999999 8602.8 8581.4 9692.3 5692.799999999999 10768.1 10780.8 True False 11133.872789215764 7448.538745558475 7233.74080319215 6630.496739079755 6657.1507096183905 9513.142585923528 10140.529300559198 11066.213206423876 4403.389889533563 8335.578731229756 8103.629825056633 1.3739364987760845 0.9191607842855063 0.892654398011276 0.8182131812805772 0.8215023209764972 1.1739359757659025 1.2513564315591537 1.3655872054035412 0.5433848762338783 1.0286228407738875 1.0 12.984352557795141 -8.770148122776058 24.998391314225564 0.7843762212405572 1.0575287927515806 0.1315648849459259 0.22757027637879965 229.0779936796848 657564.9744004866 0.044263872325871166 0.04747588001526336 1.6976645392509159e-09 8.770148122776058 0.27315257151102346 TVDS(ph)PK ddPTM_A549_PD325901_60min_R1 2 TVDSPK 6 0 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 T(0.017)VDS(0.983)PK;T(0.128)VDS(0.872)PK 80.219 0.042985 147088000.0 19881.1 18069.3 17936.6 16488.5 19488.5 14485.0 13053.5 14055.599999999999 16325.5 18498.9 20896.7 True False 21899.414636307727 19592.063325213865 19153.885537537888 17506.95719689954 18119.69499167514 14367.038962486438 13550.258085649288 13775.250031595111 15639.396008455533 17330.87629695797 18326.53837509544 1.194956417195928 1.0690542274932942 1.0451447592288765 0.9552789969703359 0.9887134504516475 0.7839472282452588 0.7393790255590875 0.7516558637344612 0.8533742536838514 0.9456710232036778 1.0 14.161646686392432 -5.9398748016392995 1.039909889338795 0.892653063375608 1.1894930849833252 0.6033435921907371 0.0862953409343848 0.5671289961575146 0.8820758592559473 0.016387548156482978 0.14240808941869626 1.1484846587973838e-06 5.9398748016392995 0.29684002160771716 TVDS(ph)PKRR ddPTM_A549_MK2206_60min_R1 3 TVDSPKRR 8 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 T(0.093)VDS(0.907)PKRR;TVDS(1)PKRR;T(0.033)VDS(0.967)PKRR 98.943 0.00049753 118304000.0 8597.8 10336.8 7403.700000000001 4510.09 7744.299999999999 5757.8 5801.0 4623.9800000000005 8661.7 14506.0 15367.2 True False 10048.898443971748 10862.898967957452 8453.655988602548 5615.062252465635 6605.123728812175 6367.086574281685 6854.966610639748 5279.443325344846 6699.838779892643 11229.084525145458 11551.100126856101 0.86995163522202 0.9404211589077481 0.7318485595106174 0.4861062747963473 0.5718177192019468 0.5512104045811466 0.5934470773655639 0.45705112650441276 0.5800173755152237 0.9721225166283545 1.0 13.495742640019984 -10.70929614360589 0.999580839124691 0.997065428839025 0.6369957507878481 0.4543218067433129 0.14444273871539504 0.4206342042996818 0.7564255733892196 0.10489122311773554 0.028249943477500462 1.9530072540695295e-11 10.70929614360589 -0.36006967805117696 TVDS(ph)PKRR ddPTM_A549_PD325901_60min_R1 4 TVDSPKRR 8 2 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 T(0.006)VDS(0.994)PKRR;T(0.195)VDS(0.805)PKRR;T(0.229)VDS(0.771)PKRR;T(0.002)VDS(0.998)PKRR 102.06 0.00046159 366447000.0 18423.9 18596.6 17760.9 17188.8 16670.3 19686.2 14817.8 16858.8 16805.7 19632.4 24041.4 True False 20294.280765041683 20163.80074677338 18966.261478967983 18250.513137402846 15499.43563741294 19525.882114138803 15381.699487611291 16522.53800852725 16099.414872396002 18392.80691351366 21084.46021099118 0.9625231360896979 0.9563346912842537 0.8995374455486892 0.8655907220185312 0.7351118066249187 0.9260792981534381 0.7295277817732758 0.7836358077554278 0.7635677988096414 0.8723394732166594 1.0 14.363892466810576 -5.925807838097708 2.550791718509227 0.8580401108240617 0.9622045296445616 0.23616250085948032 0.08042525524185387 0.47540456926033486 6.108320961196066 0.014973385245726362 0.05990577985154186 1.1862935303269003e-06 5.925807838097708 0.10416441882049987 TVDSQGPT(ph)PVCT(ph)PTFLER ddPTM_A549_MK2206_60min_R1 2 TVDSQGPTPVCTPTFLER 18 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 2 T(0.001)VDS(0.006)QGPT(0.938)PVCT(0.829)PT(0.226)FLER;TVDS(0.001)QGPT(0.999)PVCT(0.918)PT(0.082)FLER 86.455 9.3034e-07 933000.0 881.8 1203.9 910.02 838.14 1166.3 1050.1 1036.0 1225.6 1460.9 1488.5 1357.2 True False 1030.6262820598627 1265.1733677273403 1039.0745198681868 1043.484337625534 994.7388149882681 1161.2208850000343 1224.2277897987904 1399.3325532425847 1130.008482577919 1152.246816191853 1020.1697831855571 1.0102497633694407 1.2401596171342588 1.0185309710150385 1.022853602237831 0.9750718276345347 1.1382623795953204 1.200023574483893 1.3716663405507497 1.1076670777773698 1.1294657371578634 1.0 9.99459355938436 TVEALYK ddPTM_A549_PD325901_60min_R1 2 TVEALYK 7 0 F8VVM2;Q00325-2;Q00325 F8VVM2 SLC25A3 Phosphate carrier protein, mitochondrial 0 ; 102.72 0.029310000000000003 4076300.0 4771.9 4837.0 5017.3 4970.2 5808.6 5916.3 5005.7 5999.1 6473.5 5305.799999999999 6397.0 False True 5256.339775112886 5244.630965452976 5357.804149475872 5277.19796585681 5400.623974582151 5868.119614343015 5196.194652724142 5879.44324429709 6201.441307202648 4970.790882506504 5610.209553924088 0.9369239641746205 0.9348369102869951 0.9550096298503378 0.9406418628633307 0.9626421121479605 1.0459715555969795 0.9262033089458553 1.0479899525650846 1.1053849678155105 0.8860258845464445 1.0 12.453838944401824 -7.628125120031855 0.9473226307064495 1.0487845822904744 0.9416970214768022 0.0 0.06352753242912168 0.3584994415699096 0.6473001556529651 0.009078225912562545 0.016995700293288687 2.354370893054037e-08 7.628125120031855 -0.10708756081367221 TVEDADMELT(ph)SRDEGER ddPTM_A549_MK2206_60min_R1 5 TVEDADMELTSRDEGER 17 1 F5GY68;F5H0F9;Q9UJX4-2;Q9UJX4-3;Q9UJX4 F5GY68 ANAPC5 Anaphase-promoting complex subunit 5 1 TVEDADMELT(0.819)S(0.181)RDEGER;T(0.001)VEDADMELT(0.5)S(0.5)RDEGER;TVEDADMELT(0.89)S(0.11)RDEGER;T(0.002)VEDADMELT(0.899)S(0.098)RDEGER;TVEDADMELT(0.5)S(0.5)RDEGER 76.704 0.00016848 16628000.0 2275.05 2695.13 2230.52 2814.08 3337.9 3051.5400000000004 2583.01 2744.37 4740.969999999999 4137.610000000001 4107.8 True False 2659.0228203677607 2832.300605169024 2546.841276077875 3503.5297263288494 2846.899331689391 3374.4519373516855 3052.309481977 3133.392851780637 3667.1478647733843 3202.9210273050535 3087.7198904874977 0.8611606346027544 0.9172789973257104 0.8248291187047323 1.134665659641718 0.9220069930760186 1.0928620655479593 0.9885318585343222 1.01479180849074 1.187655614769643 1.0373094519267962 1.0 11.592326165851619 -6.243775671534445 0.6726565543350767 1.080025622744044 0.827288576003188 0.39302189164182333 0.08357083559330201 0.9162029366448425 0.555967997164936 0.01634771357216345 0.1378346572290465 5.704588583757238e-07 6.243775671534445 -0.25273704674085595 TVEDADMELT(ph)SRDEGER ddPTM_A549_PD325901_60min_R1 4 TVEDADMELTSRDEGER 17 1 F5GY68;F5H0F9;Q9UJX4-2;Q9UJX4-3;Q9UJX4 F5GY68 ANAPC5 Anaphase-promoting complex subunit 5 1 TVEDADMELT(0.82)S(0.179)RDEGER;TVEDADMELT(0.776)S(0.224)RDEGER;TVEDADMELT(0.982)S(0.018)RDEGER;TVEDADMELT(0.5)S(0.5)RDEGER 97.45700000000001 6.7699e-07 13647400.0 2001.37 1688.5 2091.76 2251.68 2111.47 2110.78 1892.77 1969.02 2164.41 2299.51 2184.19 True False 2204.547609069276 1830.7958207912654 2233.719412374714 2390.761159663688 1963.1676313760577 2093.5905075068777 1964.8003981134873 1929.7463514336928 2073.4473746385233 2154.3185461631674 1915.5484767211908 1.1508701741877918 0.9557554105469599 1.1660991301030035 1.2480817837384675 1.0248592793309912 1.0929457191761798 1.0257116549076326 1.0074119109409354 1.0824301237145433 1.1246484087161683 1.0 10.903541821120985 TVEDADMELTS(ph)RDEGER ddPTM_A549_MK2206_60min_R1 1 TVEDADMELTSRDEGER 17 1 F5GY68;F5H0F9;Q9UJX4-2;Q9UJX4-3;Q9UJX4 F5GY68 ANAPC5 Anaphase-promoting complex subunit 5 1 TVEDADMELT(0.461)S(0.538)RDEGER 46.361999999999995 0.0061263 2393800.0 355.6 143.13 255.63 304.83 452.52 282.68 313.51 279.53 535.33 796.08 618.59 True False 415.61658641470547 150.41470564234095 291.8821778795019 379.5133636843385 385.95490744961904 312.59300997220237 370.47070886082855 319.1542335247221 414.07860974634673 616.2449750984283 464.9770307845228 0.8938432629961636 0.32348846434103823 0.6277346160239997 0.8161980884174268 0.8300515550164373 0.6722762400645604 0.7967505582711464 0.6863870952641161 0.890535622905289 1.3253234768579467 1.0 8.861015640636849 -8.455306819747891 0.2696692670768618 1.0480594218320476 0.5746657684092681 0.4592967685172349 0.17453825462794653 1.1011165866031092 0.2675928799438144 0.15579009284597825 0.1827221086052089 3.505041627791435e-09 8.455306819747891 -0.4733936534227795 TVEDADMELTS(ph)RDEGER ddPTM_A549_PD325901_60min_R1 2 TVEDADMELTSRDEGER 17 1 F5GY68;F5H0F9;Q9UJX4-2;Q9UJX4-3;Q9UJX4 F5GY68 ANAPC5 Anaphase-promoting complex subunit 5 1 TVEDADMELT(0.456)S(0.544)RDEGER;TVEDADMELT(0.305)S(0.695)RDEGER 87.352 2.1961e-06 6945200.0 915.5600000000001 1291.95 1493.58 1139.17 1476.9 1227.31 1609.67 1249.1299999999999 1090.45 1571.58 1729.04 True False 1008.5069772003519 1400.8271605989194 1594.94332042616 1209.5339436572187 1373.1676390284013 1217.315194273333 1670.9268726952223 1224.2151222264713 1044.622178642022 1472.35017059248 1516.3790412876203 0.66507578233473 0.9237974955189429 1.0518104491023745 0.7976461760050134 0.9055569891432868 0.8027776440642836 1.1019189972952732 0.807327910036886 0.6888925197455842 0.9709644689775232 1.0 10.566414706135976 TVEDEDQDS(ph)EEEKDNDSYIK ddPTM_A549_MK2206_60min_R1 2 TVEDEDQDSEEEKDNDSYIK 20 1 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 TVEDEDQDS(1)EEEKDNDSYIK;TVEDEDQDS(1)EEEKDNDSYIK 180.37 3.381e-36 225230000.0 3852.0 4612.200000000001 4131.3 3570.1 5597.0 4715.2 4131.8 5321.7 6945.2 5776.4 6438.2 True False 4502.123427641858 4846.941279701007 4717.180461892526 4444.774660267878 4773.688714301066 5214.159334303553 4882.494577114513 6076.067272022733 5372.123289205398 4471.507228115968 4839.417254719466 0.930302801076168 1.0015547378094345 0.9747414231108648 0.9184524553929035 0.9864180877657739 1.0774353728682176 1.0089013449611186 1.2555369690632212 1.110076483685392 0.9239763783036673 1.0 12.240617618454774 -7.164588121425612 3.974242805142123 1.0682223426030495 0.9600087063805269 0.2825100230662466 0.08011866550939022 0.227145383340143 6.492399047284597 0.011283805015667779 0.019999323718614574 6.845605668116907e-08 7.164588121425612 -0.10821363622252256 TVEDEDQDS(ph)EEEKDNDSYIK ddPTM_A549_PD325901_60min_R1 2 TVEDEDQDSEEEKDNDSYIK 20 1 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 TVEDEDQDS(1)EEEKDNDSYIK;TVEDEDQDS(1)EEEKDNDSYIK 280.4 3.432699999999999e-127 503370000.0 12574.9 12511.1 13167.7 12740.9 14927.6 13268.8 13172.900000000001 13365.099999999999 12728.400000000001 14875.5 14046.4 True False 13851.494590847899 13565.454304709263 14061.339305812566 13527.876456316662 13879.136873424317 13160.743292056624 13674.201917987471 13098.522595781884 12193.469612203331 13936.258391331294 12318.781847465885 1.1244208041314823 1.101200952551963 1.141455338679055 1.098150500903586 1.1266647177682925 1.0683477843033595 1.110028742070825 1.0632969037012698 0.9898275465208979 1.131301663094078 1.0 13.588571980589633 -8.561742035788813 2.5727895560140004 0.9948426273118866 1.1096689487711076 0.16548149696552605 0.04498875154272658 0.05808125505562707 0.772617752746674 0.003078552033434459 0.003566177726365269 2.7432031083546672e-09 8.561742035788813 0.114826321459221 TVEDEDQDS(ph)EEEKDNDSYIKER ddPTM_A549_MK2206_60min_R1 3 TVEDEDQDSEEEKDNDSYIKER 22 2 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 TVEDEDQDS(1)EEEKDNDSYIKER;TVEDEDQDS(1)EEEKDNDSYIKER;TVEDEDQDS(1)EEEKDNDSYIKER 193.14 5.427799999999999e-51 136587700.0 7912.900000000001 10441.400000000001 9651.7 8554.7 12946.1 8822.6 8680.4 8325.3 14199.6 14192.5 15506.2 True False 9248.404068169077 10972.822661174729 11020.456191525209 10650.601884035072 11041.745839594969 9756.2016760321 10257.516319082442 9505.436770161949 10983.41327210173 10986.40439288066 11655.582590651265 0.7934741997012708 0.941422067565789 0.9455088242748604 0.9137768791220895 0.947335386602756 0.8370411002756203 0.880051789715755 0.815526525270911 0.9423306974729285 0.9425873230646282 1.0 13.508733497241229 -9.238707573240271 1.9593840827753115 0.9811686233507441 0.889988558461058 0.2779847621751057 0.05272408619898049 0.22982832396322905 1.821774578761716 0.01078976433892308 0.009841948372615024 5.771549526570111e-10 9.238707573240271 -0.09118006488968611 TVEDEDQDS(ph)EEEKDNDSYIKER ddPTM_A549_PD325901_60min_R1 3 TVEDEDQDSEEEKDNDSYIKER 22 2 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 TVEDEDQDS(1)EEEKDNDSYIKER;TVEDEDQDS(1)EEEKDNDSYIKER;TVEDEDQDS(1)EEEKDNDSYIKER 203.04 2.2327999999999996e-61 214622000.0 17859.2 17475.0 18811.5 20111.0 21173.2 27967.5 23369.699999999997 26104.6 22768.100000000002 23165.5 24954.1 True False 19672.252836751835 18947.679578517833 20088.161512739003 21353.210794605122 19686.067475574633 27739.741952595075 24259.046721890525 25583.92327433746 21811.235935200544 21702.82637655105 21884.903897073153 0.8988960120305928 0.8657876528784694 0.9179003758579701 0.9757050291393266 0.8995272525828826 1.2675286162122439 1.1084831277296532 1.169021504259793 0.9966338457678829 0.9916802229802593 1.0 14.417648428250175 TVEDLKNNESQWKDS(ph)PLATR ddPTM_A549_MK2206_60min_R1 2 TVEDLKNNESQWKDSPLATR 20 2 O95155-2;O95155;O95155-4;K7EP75;O95155-3 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 TVEDLKNNES(0.077)QWKDS(0.845)PLAT(0.078)R;TVEDLKNNES(0.003)QWKDS(0.997)PLAT(0.001)R 76.471 6.7333e-05 13383600.0 3431.5 4487.5 4717.3 3760.3 6246.799999999999 4740.4 5156.799999999999 4454.4 7258.3 6787.9 6841.9 True False 4010.653307879816 4715.894582337771 5386.284073508489 4681.57366880628 5327.903995085924 5242.025981577151 6093.723809299613 5085.824841027876 5614.306639123358 5254.508675598712 5142.86740316627 0.7798476984669306 0.9169776726956583 1.0473309248051692 0.9103041750452308 1.035979265536913 1.019280796224657 1.1848883767736138 0.9889084128236952 1.091668557440707 1.0217079818864683 1.0 12.328357242307248 -4.302005605913609 0.685704526298741 1.0467342689075088 4.378316613079929e-18 0.5988786485461521 0.06347555747683661 4.624695614062723 0.577416278611306 0.01027899838405875 5.136753354905164 4.988780478541588e-05 4.302005605913609 -1.0467342689075088 TVEDLKNNESQWKDS(ph)PLATR ddPTM_A549_PD325901_60min_R1 2 TVEDLKNNESQWKDSPLATR 20 2 O95155-2;O95155;O95155-4;K7EP75;O95155-3 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 TVEDLKNNES(0.02)QWKDS(0.93)PLAT(0.05)R;TVEDLKNNES(0.008)QWKDS(0.989)PLAT(0.003)R 61.801 0.00046049 8869800.0 4769.4 3968.7 4643.700000000001 4660.6 5107.200000000001 5501.2 4422.1 5142.2 6610.6 4921.0 6259.6 True False 5253.58597695329 4303.156277153862 4958.8494068365635 4948.474677009428 4748.487890883508 5456.400051117047 4590.38543536597 5039.63478702214 6332.779470980741 4610.287220176888 5489.708882873721 0.9569880824360166 0.7838587380431857 0.9032991571386811 0.9014093065020652 0.86497990917103 0.9939324957903345 0.8361801205318233 0.9180149429679814 1.1535729136270143 0.8398054101847967 1.0 12.422513930364284 -8.652318764657776 6.5647986188949785 1.0722515153544598 0.8903668528247235 0.0669577516573725 0.09362618358023414 0.11217751861502295 6.166503614832313 0.012134500700994755 0.01375023270219128 2.22680011642945e-09 8.652318764657776 -0.18188466252973634 TVEKPPK ddPTM_A549_PD325901_60min_R1 1 TVEKPPK 7 1 A0A087WUZ3;Q01082;Q01082-2;F8W6C1;P11277-3;P11277;P11277-2;Q01082-3;O15020;A4QPE4;O15020-2 A0A087WUZ3;Q01082-3;O15020 SPTBN1;SPTB;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 2 0 54.408 0.042994 2075800.0 2691.0 2978.4 2467.6 2438.3 3359.5 3258.1 2594.3 2828.7 2879.9 2897.0 2969.0 False True 2964.1883389905024 3229.4002206957102 2635.066174884231 2588.9082532189173 3123.540309645823 3231.5671138196108 2693.027506155431 2772.2793594277773 2758.8678181220234 2714.0829255948875 2603.831822041679 1.1383946973450327 1.2402491564004006 1.0119955338813167 0.9942686126283455 1.1995937230679659 1.2410813503637577 1.034255547289461 1.0646921724975378 1.0595414783581452 1.0423418680960586 1.0 11.34642055446293 -8.865247384724164 0.6230841515145753 1.0108688510060495 1.1289860599945156 0.20571905681236857 0.08058239340451422 0.7181607982151214 0.6134062763620006 0.02690336286614073 0.024909782400187302 1.3638060581108217e-09 8.865247384724164 0.11811720898846612 TVELQGK ddPTM_A549_MK2206_60min_R1 1 TVELQGK 7 0 P61026 P61026 RAB10 Ras-related protein Rab-10 0 77.058 0.048194 1552900.0 2412.8 2201.3 2319.2 1887.0 2549.6 1992.4 2198.4 1892.9 3149.0 3083.3 3064.1 False True 2820.021652703603 2313.336767487495 2648.097433549039 2349.3150847106504 2174.5572174346976 2203.234445551919 2597.820823449478 2161.224371763127 2435.756527919685 2386.7803885551502 2303.199405142105 1.224393183850102 1.0044014262606864 1.1497473591026974 1.0200224433306069 0.9441463090776239 0.9565973491626453 1.1279183285865755 0.9383574721919404 1.057553472131694 1.036289078238924 1.0 11.169423606064642 -2.000000088065295 0.9765075040066448 1.0206493277979396 162.87920918626665 0.422737473899118 0.06631668873738968 1030.1460764039534 1.4914701021751966 0.009446233961098553 372891.4338878002 0.00999999797222185 2.000000088065295 161.8585598584687 TVESLEETLKK ddPTM_A549_MK2206_60min_R1 2 TVESLEETLKK 11 1 F2Z3J9;Q14914-2;Q14914 F2Z3J9 PTGR1 Prostaglandin reductase 1 0 ; 79.82 0.00093898 6458100.0 2722.6000000000004 3627.2 3492.4 3089.1 3840.0 3327.1 3630.4 3087.6 4316.5 4696.0 4451.299999999999 False True 3182.108318820802 3811.808986976166 3987.674834825229 3845.9296386749666 3275.1410868172393 3679.1715136497633 4289.99668734124 3525.276755378427 3338.8196420340814 3635.170338486356 3345.9193603697827 0.9510415452657901 1.13924114015554 1.1918024331538346 1.149438831140845 0.9788463899068024 1.099599577092961 1.2821578242899196 1.0536048169997803 0.9978780964001127 1.08644887905625 1.0 11.708186960224685 -8.519304845394323 20.948082308779686 1.0004054271283946 1.1168240390496105 0.13497250629649304 0.08982389215721638 17.41670874536129 102088.90122541158 0.014151401599790777 0.016259911400327006 3.0247894848301537e-09 8.519304845394323 0.11641861192121583 TVESLEETLKK ddPTM_A549_PD325901_60min_R1 2 TVESLEETLKK 11 1 F2Z3J9;Q14914-2;Q14914 F2Z3J9 PTGR1 Prostaglandin reductase 1 0 ; 117.23 1.7970999999999998e-05 10965400.0 4737.7 4943.8 5654.9 4821.1 5773.5 5443.6 4945.4 5575.2 6313.9 5943.1 5796.3 False True 5218.667816289596 5360.431376267612 6038.675519676142 5118.888397487481 5367.989277493725 5399.269126419828 5133.599903226716 5463.998262340212 6048.548740178702 5567.85165174421 5083.391845773051 1.0266113600172353 1.0544989524513886 1.187922494052358 1.0069828478290428 1.05598573557876 1.0621390776533264 1.0098768812196555 1.0748725315920007 1.1898647445815533 1.0953024713949602 1.0 12.311575727757084 -8.52459368493306 24.99194938448696 1.091906254374681 1.0594403732516884 0.06642522628245562 0.060970578631101946 185.67777691074275 2705890.7150446824 0.01343457686877615 0.015291981328640002 2.9881769752711665e-09 8.52459368493306 -0.032465881122992535 TVETRDGQVINET(ph)SQHHDDLE ddPTM_A549_MK2206_60min_R1 1 TVETRDGQVINETSQHHDDLE 21 1 P08670 P08670 VIM Vimentin 1 TVETRDGQVINET(0.5)S(0.5)QHHDDLE 58.015 0.002318 2642300.0 116.44 137.44 238.71 218.83 205.04 185.79 91.345 265.82 272.47 250.26 392.21 True False 136.09222531532143 144.43510894629588 272.5626674553689 272.4433598236522 174.87888761484558 205.45017448257926 107.94120411116836 303.50079903960795 210.75598004518167 193.72609218688154 294.8134325546769 0.4616215215705322 0.4899203801356933 0.9245259454208169 0.9241212568329094 0.5931849376721058 0.6968819999220215 0.366133941645109 1.0294673360357143 0.7148791634726287 0.6571141976407489 1.0 8.203658449073815 -14.999999999999998 0.1621060274789653 2.211928628994431 0.6046460283404694 0.0 0.21918887643868812 56.58789250365566 0.5889845994471096 21.755286495782226 0.2978298407871926 1.000000000000004e-15 14.999999999999998 -1.6072826006539618 TVETRDGQVINET(ph)SQHHDDLE ddPTM_A549_PD325901_60min_R1 1 TVETRDGQVINETSQHHDDLE 21 1 P08670 P08670 VIM Vimentin 1 T(0.002)VET(0.002)RDGQVINET(0.498)S(0.498)QHHDDLE 41.083999999999996 0.047355 4431100.0 241.28 152.28 270.68 283.03 334.76 185.88 249.76 207.99 230.94 330.59 394.0 True False 265.77456797905165 165.11317002670648 289.0499725310682 300.51212029223257 311.2476124593052 184.36625490831753 259.26475347391596 203.84147628500148 221.23439491548314 309.7164909811578 345.54049777178193 0.7691560604123079 0.4778402852673966 0.8365154718332788 0.8696871198313515 0.9007558143441523 0.5335590360528025 0.7503165479756638 0.5899206535832221 0.640256052017385 0.8963247230885084 1.0 8.43271099593265 -10.78670395077812 1.02636956332573 1.0005817520456708 0.7048379276882684 0.3170551190600477 0.13357563250290821 0.43079713031376804 0.8033123440888097 0.09207726166001945 0.022983060625301522 1.6341655438516765e-11 10.78670395077812 -0.29574382435740243 TVETRDGQVINETS(ph)QHHDDLE ddPTM_A549_PD325901_60min_R1 1 TVETRDGQVINETSQHHDDLE 21 1 P08670 P08670 VIM Vimentin 1 TVET(0.001)RDGQVINET(0.174)S(0.825)QHHDDLE 48.867 0.0058706 5301100.0 276.96 286.26 346.67 315.59 292.17 407.68 487.52 391.57 244.08 233.65 330.37 True False 305.0767753128243 310.3841348295574 370.19711089605977 335.08327754310716 271.6489871317815 404.35998924587295 506.07284038118 383.75982916927774 233.82216641106402 218.89729912504157 289.73658438797884 1.0529453018756643 1.0712631802614543 1.27770233668641 1.1565100701760387 0.937572270017594 1.3956124667515402 1.746665307904337 1.3245128501114474 0.8070163693859204 0.7555045200364542 1.0 8.178598051748445 -8.75873090631738 24.99108526586252 0.9088688346266632 1.249122581363878 0.3969117101502 0.21180356867504782 61.55137049418668 567933.7482850265 0.03874950727033443 0.042977787613984866 1.7428864506927911e-09 8.75873090631738 0.34025374673721476 TVEVAEGEAVRT(ph)PQSVTAK ddPTM_A549_MK2206_60min_R1 2 TVEVAEGEAVRTPQSVTAK 19 1 E5RJU9;Q86UE4;H0YB56 E5RJU9 MTDH Protein LYRIC 1 TVEVAEGEAVRT(0.99)PQS(0.007)VT(0.002)AK;TVEVAEGEAVRT(1)PQSVTAK 207.24 3.6384999999999994e-56 71100000.0 13442.2 14488.0 14217.8 12391.7 19112.3 15629.4 14032.199999999999 12776.0 21043.2 20998.1 20273.6 True False 15710.914729763097 15225.377316748658 16234.097831456334 15427.667056284552 16300.905987910706 17283.29273404395 16581.669104261167 14587.037124859055 16276.948799085265 16254.61462618619 15239.105597104865 1.0309604215058308 0.9990991413328867 1.0652920362032599 1.0123735253344206 1.0696760307906497 1.1341408866756222 1.0880998887107498 0.9572108436357518 1.0681039445108622 1.0666383615895576 1.0 13.895490611220133 -2.5981728095762446 20.546606299487287 1.0385627989381339 0.23457971007775724 0.0 0.04799505703647883 0.0 0.0 0.006433499253394895 0.0 0.0025224768571367787 2.5981728095762446 -0.8039830888603766 TVEVAEGEAVRT(ph)PQSVTAK ddPTM_A549_PD325901_60min_R1 2 TVEVAEGEAVRTPQSVTAK 19 1 E5RJU9;Q86UE4;H0YB56 E5RJU9 MTDH Protein LYRIC 1 TVEVAEGEAVRT(0.992)PQS(0.006)VT(0.002)AK;TVEVAEGEAVRT(0.999)PQS(0.001)VTAK 155.05 8.292299999999999e-27 129820000.0 11182.4 10828.0 11822.900000000001 11100.1 14621.3 11906.8 12284.099999999999 12814.099999999999 13570.599999999999 13624.7 14215.3 True False 12317.629015952218 11740.513560869304 12625.273090873237 11785.72796684383 13594.350328746681 11809.834968486959 12751.57814761744 12558.512723033024 13000.274875032717 12764.434116794146 12466.9082182112 0.9880259644455455 0.9417341778227897 1.0127028185248612 0.9453609315602142 1.0904347806851225 0.9472946108029886 1.022834043888316 1.0073478125625415 1.0427825927235428 1.0238652513819209 1.0 13.605816102029925 TVFDEAIR ddPTM_A549_MK2206_60min_R1 2 TVFDEAIR 8 0 P63000-2;B1AH77;B1AH80;P63000;P15153;J3KSC4;J3QLK0;P60763 P63000-2 RAC1;RAC2;RAC3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 0 ; 83.265 0.0093689 3948700.0 1426.68 1457.96 1358.68 1106.05 2165.8599999999997 1236.35 1195.86 1569.31 2132.21 2027.51 2376.0 False True 1667.4687050228683 1532.163936549343 1551.3612543180452 1377.032299652471 1847.264863097393 1367.1797363772903 1413.1322825374323 1791.7644983103141 1649.2678394397058 1569.4940828331507 1785.9736257359898 0.9336468808914878 0.8578872131540838 0.8686361500320241 0.7710261113654484 1.0343181088892874 0.7655094771144132 0.7912391662307378 1.0032424177439563 0.9234558762087272 0.8787890594892581 1.0 10.802495060361512 -9.113785252091617 0.6710126159053709 0.9858255916536507 0.8651477146790517 0.06661914807700442 0.08722623964131355 0.6089644644676124 0.6027247784437044 0.026007797760850642 0.020705782630453598 7.695108503608269e-10 9.113785252091617 -0.12067787697459897 TVFDEAIR ddPTM_A549_PD325901_60min_R1 2 TVFDEAIR 8 0 P63000-2;B1AH77;B1AH80;P63000;P15153;J3KSC4;J3QLK0;P60763 P63000-2 RAC1;RAC2;RAC3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 0 ; 92.439 0.0071606000000000005 7235000.0 2778.0 3240.5 3135.0 3306.8999999999996 3638.0 3084.8999999999996 2911.9 3183.2 3319.8999999999996 3353.8 3107.2 False True 3060.020514944487 3513.58830753574 3347.7599522864593 3511.1597024851917 3382.479430418663 3059.777597195333 3022.713947952822 3119.70857882791 3180.376148263238 3142.04049563691 2725.034098163658 1.1229292569243698 1.2893740705496022 1.228520389723726 1.2884828504903063 1.2412613231878613 1.1228401139116941 1.109238944932749 1.1448328594971398 1.1670959091507975 1.1530279557801728 1.0 11.412058567008105 -14.833466748440701 0.1322167406964058 0.33759164857104795 1.2809249728389505 0.23999917208699562 0.07186583465486111 30.63172565498311 0.2876711628358046 5.35952197618303 0.16180203196516657 1.4673484294714764e-15 14.833466748440701 0.9433333242679025 TVFPGAVPVLPAS(ph)PPPKDSLR ddPTM_A549_MK2206_60min_R1 2 TVFPGAVPVLPASPPPKDSLR 21 1 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;M0R2S2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 TVFPGAVPVLPAS(0.999)PPPKDS(0.001)LR;TVFPGAVPVLPAS(1)PPPKDSLR 128.17 6.233e-18 193760000.0 5359.4 5960.7 5717.9 5303.9 8835.8 6407.700000000001 6776.299999999999 5898.6 8577.2 7640.799999999999 7798.200000000001 True False 6263.935695250207 6264.074169791807 6528.784199417931 6603.355738101115 7536.065524713481 7085.758560912983 8007.465996152061 6734.744613704882 6634.477894973871 5914.737973233931 5861.691720628955 1.0686225058894927 1.068646129537443 1.113805452518304 1.1265272984012507 1.2856468548477105 1.2088248407837945 1.3660674047342882 1.1489421373020021 1.1318367139004022 1.0090496489977956 1.0 12.517101380152031 -9.936734702092096 0.879226089925564 1.0146787265101027 1.1736200266882937 0.35137804873336953 0.08584990673485585 0.4636521113975508 0.7317886071291193 0.036535416134242056 0.018678515485827246 1.1568186933960922e-10 9.936734702092096 0.15894130017819097 TVFPGAVPVLPAS(ph)PPPKDSLR ddPTM_A549_PD325901_60min_R1 2 TVFPGAVPVLPASPPPKDSLR 21 1 Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;Q9UBC2-3;M0R2S2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 TVFPGAVPVLPAS(0.997)PPPKDS(0.003)LR;TVFPGAVPVLPAS(1)PPPKDSLR 153.59 1.56e-23 406120000.0 15978.7 18214.8 18456.9 17588.5 20374.5 18118.3 19067.4 19783.5 21416.9 21309.0 21771.6 True False 17600.84586110277 19749.82512084617 19709.496224355982 18674.901698618272 18943.4654082092 17970.750571903212 19793.020341081643 19388.902572644492 20516.822172275963 19963.54610338331 19093.83122154348 0.9218079733125438 1.0343563264853066 1.0322441837716596 0.9780594309196295 0.9921249008860712 0.9411809690465315 1.0366185869889364 1.015453752977982 1.0745262139495046 1.0455495218193054 1.0 14.220818991445466 -7.829547924181786 24.999922387022963 1.0343897093659804 0.9880042706314135 0.33203964119137497 0.03577405874535743 57.0082753596525 20924.75352275814 0.006226562593512145 0.008603234762637538 1.4806488573814156e-08 7.829547924181786 -0.04638543873456691 TVFS(ph)PTLPAAR ddPTM_A549_MK2206_60min_R1 4 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.181)VFS(0.685)PT(0.134)LPAAR;T(0.004)VFS(0.982)PT(0.014)LPAAR;T(0.004)VFS(0.986)PT(0.009)LPAAR;T(0.004)VFS(0.977)PT(0.019)LPAAR 120.77 1.1465e-05 208108000.0 6024.459999999999 8304.3 6641.35 6132.38 9789.2 7098.6 6896.07 6906.91 11243.3 9538.2 9748.0 True False 7041.241564094312 8726.953399466862 7583.19329523151 7634.813375292999 8349.221647674822 7849.769140330679 8148.996654824073 7885.985644024756 8696.710501860718 7383.513995432407 7327.302568886544 0.9609595752184557 1.1910185661669774 1.0349229097528385 1.041967805139127 1.1394672963455321 1.0713040803941483 1.1121414160548844 1.0762467592795353 1.186891140375314 1.0076715033967 1.0 12.839066475284087 -6.717217553208873 24.995776400751758 1.0927157651339896 1.0651820472872964 0.02175618242575328 0.07144112542042502 526.6622246647823 297686.12883388234 0.011351359091712594 0.023629604106445382 1.9177078534660706e-07 6.717217553208873 -0.02753371784669323 TVFS(ph)PTLPAAR ddPTM_A549_PD325901_60min_R1 3 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 T(0.024)VFS(0.976)PT(0.001)LPAAR;TVFS(0.884)PT(0.116)LPAAR;T(0.11)VFS(0.883)PT(0.007)LPAAR 137.01 5.3713e-08 307471200.0 8889.7 7983.200000000001 7366.4 8764.1 9111.900000000001 8730.199999999999 7708.400000000001 8561.1 9116.9 9145.400000000001 10065.2 True False 9792.175799748746 8655.972281042837 7866.328201761717 9305.438552284757 8471.911578348498 8659.104145688583 8001.747380198329 8390.342144446977 8733.748397873764 8567.957883236279 8827.244208559749 1.1093128918143338 0.9805973502635364 0.8911420162290021 1.0541725517530494 0.9597459159601944 0.980952145550916 0.906483064379148 0.9505052705249607 0.9894082673508316 0.970626582974555 1.0 13.107747395561823 -3.8562910739707714 16.409242983638087 0.9857600109913784 0.9857102101691396 0.0 0.05846327168451446 0.0 0.0 0.007073998931283733 0.0 0.00013922233906220015 3.8562910739707714 -4.980082223882132e-05 TVFSNGYSSPSMRPDVS(ph)SPPSSSSTATTGPPPK ddPTM_A549_MK2206_60min_R1 1 TVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPK 33 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;P04150-12;P04150-13;P04150-11;P04150-14;P04150-15;P04150-16 P04150-3 NR3C1 Glucocorticoid receptor 1 T(0.003)VFS(0.012)NGY(0.007)S(0.052)S(0.052)PS(0.048)MRPDVS(0.305)S(0.305)PPS(0.034)S(0.034)S(0.034)S(0.034)T(0.034)AT(0.034)T(0.01)GPPPK 42.782 0.012403 4342500.0 562.92 480.41 205.4 314.86 619.83 335.78 582.95 375.51 432.56 668.04 800.19 True False 657.9271339273507 504.86081700298325 234.52880857665275 392.0007141346026 528.6538280838358 371.3120167272749 688.8644691729769 428.7396924511444 334.5858506563797 517.12930002607 601.4807388794952 1.0938457233942522 0.8393632320521082 0.3899190670902595 0.651726129858896 0.8789206268993262 0.6173298540182616 1.145281011751548 0.7128070189742868 0.5562702660764886 0.8597603657091923 1.0 9.232374728725613 -6.7584602627786055 24.978968089763395 0.7990634235796533 0.7252746509792981 0.019581992385184988 0.2208357699550236 348.95701518971754 2925843.6439882987 0.035346217429795074 0.07115303784374609 1.7439729207819683e-07 6.7584602627786055 -0.07378877260035521 TVFSNGYSSPSMRPDVSS(ph)PPSSSSTATTGPPPK ddPTM_A549_MK2206_60min_R1 2 TVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPK 33 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;P04150-12;P04150-13;P04150-11;P04150-14;P04150-15;P04150-16 P04150-3 NR3C1 Glucocorticoid receptor 1 TVFSNGYS(0.001)S(0.001)PS(0.003)MRPDVS(0.088)S(0.448)PPS(0.088)S(0.088)S(0.088)S(0.088)T(0.088)AT(0.018)T(0.004)GPPPK;TVFSNGYS(0.001)S(0.003)PS(0.015)MRPDVS(0.18)S(0.564)PPS(0.04)S(0.04)S(0.05)S(0.05)T(0.05)AT(0.005)T(0.002)GPPPK 73.975 4.649e-06 8202800.0 682.09 994.14 689.51 447.25 1148.59 825.4 750.62 1039.71 1523.31 1427.42 1580.18 True False 797.2101165005802 1044.73747968474 787.2928860841663 556.8262700778154 979.6339325279725 912.7432801438233 886.9979378173433 1187.0920764783355 1178.2827172262107 1104.9648306137549 1187.7776952506294 0.6711778809185024 0.8795732432610575 0.6628284814845272 0.4687967052288527 0.8247620210794268 0.7684462200237124 0.7467710004692254 0.9994227718073546 0.992006098395024 0.9302791549563486 1.0 10.214049130926663 -8.222279273541671 3.836044952056848 0.9971683217643392 0.7148932674580127 0.6101327115434982 0.10096210189588492 0.10871245813690378 3.447121186118622 0.01618101125808172 0.020753124922764814 5.994055039324384e-09 8.222279273541671 -0.2822750543063265 TVFSNGYSSPSMRPDVSS(ph)PPSSSSTATTGPPPK ddPTM_A549_PD325901_60min_R1 5 TVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPK 33 1 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;P04150-12;P04150-13;P04150-11;P04150-14;P04150-15;P04150-16 P04150-3 NR3C1 Glucocorticoid receptor 1 TVFSNGYS(0.001)S(0.002)PS(0.01)MRPDVS(0.098)S(0.356)PPS(0.093)S(0.093)S(0.093)S(0.093)T(0.114)AT(0.037)T(0.01)GPPPK;TVFSNGYS(0.002)S(0.002)PS(0.008)MRPDVS(0.107)S(0.413)PPS(0.107)S(0.107)S(0.107)S(0.107)T(0.029)AT(0.009)T(0.003)GPPPK;TVFSNGYSSPS(0.001)MRPDVS(0.044)S(0.179)PPS(0.044)S(0.179)S(0.179)S(0.179)T(0.179)AT(0.011)T(0.003)GPPPK;TVFSNGYS(0.001)S(0.001)PS(0.005)MRPDVS(0.112)S(0.588)PPS(0.112)S(0.112)S(0.022)S(0.022)T(0.022)AT(0.001)TGPPPK;TVFS(0.001)NGY(0.001)S(0.004)S(0.004)PS(0.013)MRPDVS(0.196)S(0.306)PPS(0.086)S(0.086)S(0.086)S(0.103)T(0.103)AT(0.009)T(0.003)GPPPK 79.898 2.5004e-06 24574000.0 2580.58 2515.37 2856.27 2276.03 2749.3999999999996 2505.73 2746.2299999999996 2892.64 2795.0999999999995 3495.2999999999997 3059.08 True False 2842.5585818774125 2727.349057591784 3050.1136583468087 2416.6152038608257 2556.2916289150835 2485.3241656521354 2850.739285444719 2834.9440259678195 2677.6316672220773 3274.60616148837 2682.8325531058467 1.0595363391526822 1.0165930983782054 1.1369004952678727 0.9007700465924241 0.9528330890258991 0.9263806504714351 1.0625856176318165 1.0566980867612767 0.998061419868434 1.22057791407721 1.0 11.389541297388549 -6.250489021639507 24.998458651305064 0.9939536681082535 1.0655682788402812 0.03916622110346912 0.08661441964622502 770.5473577229202 1759070.1445244208 0.007360739894355576 0.019277460100255193 5.617084773852664e-07 6.250489021639507 0.07161461073202768 TVGQLYK ddPTM_A549_PD325901_60min_R1 1 TVGQLYK 7 0 P35749-3;P35749-2;P35749;P35749-4;P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-4;Q7Z406-5;M0QY43 P35749-3;P35579;P35580-2;P35580-5;Q7Z406 MYH11;MYH9;MYH10;MYH14 Myosin-11;Myosin-9;Myosin-10;Myosin-14 0 77.282 0.047912 5093800.0 5951.7 6517.4 6568.5 6854.1 8312.4 7833.2 6960.1 8070.6 9206.2 6813.7 7856.5 False True 6555.912202590037 7066.644170817292 7014.277909599238 7277.462190209488 7728.565700223225 7769.409016289184 7224.970414212861 7909.62555173678 8819.29542942289 6383.481819166686 6890.200306456871 0.9514835434387053 1.0256079441108663 1.0180078368732028 1.0562047352077284 1.1216750394006272 1.1276027794153385 1.0485864115506591 1.147952918629172 1.2799766388733642 0.9264580905122114 1.0 12.750330209091135 -6.238982086330267 0.8664201314747209 1.1314921849577846 0.9632690512551799 0.1027079740600918 0.09059992686121057 0.9571072750535787 1.0948571022036473 0.01644645825333501 0.11075274830716868 5.767902542011545e-07 6.238982086330267 -0.16822313370260467 TVGQTVKS(ph)PDKLR ddPTM_A549_MK2206_60min_R1 1 TVGQTVKSPDKLR 13 2 H0YNF7;H0YNG2;H0YKW3;Q9H079 H0YNF7 KATNBL1 KATNB1-like protein 1 1 TVGQT(0.115)VKS(0.885)PDKLR 42.813 0.026041 4673000.0 1537.8 1341.3 1788.5 1425.2 1718.3 1436.8 1589.2 1264.6 2286.5 1775.2 1895.8 True False 1797.3430443997013 1409.56644084449 2042.1361934729464 1774.3740639796597 1465.5403462182455 1588.8412223293492 1877.9370690620042 1443.860922675075 1768.6114007902074 1374.1810870700558 1425.0205385817715 1.2612751856815185 0.9891551754386207 1.433057375794281 1.245156835245039 1.0284345428991506 1.1149602264053105 1.3178315808212775 1.0132211316140427 1.241112919362123 0.964323706125448 1.0 10.476766997410719 -10.923467003787101 0.983476473696169 0.9911923669719114 1.1839909642146644 0.25263853332728914 0.13173673294232296 0.7604886702399677 1.202692190668534 0.11034175496346482 0.021578985438480566 1.1927048800607131e-11 10.923467003787101 0.19279859724275306 TVGQTVKS(ph)PDKLR ddPTM_A549_PD325901_60min_R1 3 TVGQTVKSPDKLR 13 2 H0YNF7;H0YNG2;H0YKW3;Q9H079 H0YNF7 KATNBL1 KATNB1-like protein 1 1 T(0.021)VGQT(0.183)VKS(0.796)PDKLR;T(0.026)VGQT(0.172)VKS(0.802)PDKLR;TVGQT(0.004)VKS(0.996)PDKLR 66.335 0.0016303000000000001 42763100.0 7409.799999999999 7712.9 7859.4 8777.0 10332.0 8713.7 8638.2 9310.7 8909.7 9306.7 9157.8 True False 8162.037441193546 8362.893151424902 8392.786146411545 9319.135355986726 9606.31596346499 8642.738516218025 8966.931428004415 9124.990784397154 8535.256293316363 8719.07337370864 8031.44865607722 1.0162596800039942 1.0412683327181436 1.0449903256320898 1.1603305648894537 1.1960875770769077 1.0761120298861968 1.1164774640275308 1.1361575196639617 1.0627293603947678 1.085616524126206 1.0 12.97144451903485 -9.633233659379288 0.9866920236107894 1.0109829135550004 1.0989546685444165 0.06721567941550666 0.056512531952642775 0.42456538437600244 0.8616211932976735 0.017002258027389028 0.011303077617912124 2.326839033492764e-10 9.633233659379288 0.08797175498941612 TVGSTST(ph)PR ddPTM_A549_MK2206_60min_R1 2 TVGSTSTPR 9 0 Q99640-4;Q99640-3;Q99640;B4DZM6 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 TVGSTS(0.005)T(0.995)PR;TVGSTS(0.001)T(0.999)PR 156.35 1.3972000000000001e-05 246470000.0 4912.9 6189.9 5890.8 5103.0 7983.2 5876.9 5226.200000000001 5065.7 8596.7 9451.6 9323.9 True False 5742.07741112713 6504.939470799459 6726.204019295745 6353.235229082378 6808.8818552810935 6498.789657229502 6175.732890971459 5783.778488055615 6649.5611761089785 7316.476995578717 7008.518303451087 0.819299766728105 0.9281476039801937 0.9597184066685925 0.9065019101047308 0.971515170607218 0.9272701269866717 0.8811752532529517 0.8252498228059996 0.9487827366926682 1.0439406275041025 1.0 12.77489375568685 -9.320508170722688 1.8967289343284375 0.9840252237876643 0.9079442857192543 0.4079084701270629 0.05028966080625631 0.2599707974007152 1.9208114279448818 0.010271901072819192 0.009067980445753502 4.780703717516743e-10 9.320508170722688 -0.07608093806840999 TVGSTST(ph)PR ddPTM_A549_PD325901_60min_R1 1 TVGSTSTPR 9 0 Q99640-4;Q99640-3;Q99640;B4DZM6 Q99640-4 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 TVGSTS(0.002)T(0.998)PR 131.62 5.143600000000001e-05 155200000.0 4166.5 4209.2 4632.1 4538.3 4977.0 4927.2 5108.2 4730.4 5130.1 4689.6 5395.0 True False 4589.48001278481 4563.924056188683 4946.462161080097 4818.620483772883 4627.432689717894 4887.07451680795 5302.595346314295 4636.048461072991 4914.499737403309 4393.497855667856 4731.449201722754 0.9699945655368651 0.9645932697590679 1.0454433621054318 1.0184238017431084 0.9780159296718252 1.0328916804239454 1.1207127288577003 0.979836887900006 1.0386880483920033 0.9285733965120354 1.0 12.208066420851654 -5.748080750271176 24.935240162321474 1.0225373175269656 0.96729387700358 0.1271617144742907 0.046422268425929065 234.36222455809815 437452.7280633162 0.004953544865943445 0.01896108094265004 1.7861554362880652e-06 5.748080750271176 -0.05524344052338559 TVHRS(ph)PLLLGAQR ddPTM_A549_MK2206_60min_R1 4 TVHRSPLLLGAQR 13 1 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 T(0.177)VHRS(0.823)PLLLGAQR;T(0.17)VHRS(0.83)PLLLGAQR;T(0.167)VHRS(0.833)PLLLGAQR;T(0.088)VHRS(0.912)PLLLGAQR 59.513000000000005 0.0038828000000000005 20234500.0 4061.3900000000003 4428.58 3792.0399999999995 3498.68 5087.68 4139.04 3992.05 4310.620000000001 5748.879999999999 5582.48 6767.76 True False 4746.853340547863 4653.9758060054355 4329.808292478137 4355.856757061711 4339.289011608944 4577.030465527609 4717.353811067816 4921.663585720099 4446.767859074918 4321.393890799255 5087.1384113261765 0.9331087453762431 0.9148514213105873 0.8511284620914001 0.856248917340972 0.852992126565262 0.8997259550353798 0.9273098999164129 0.9674719238545468 0.8741196915685416 0.849474408083326 1.0 12.312638632374979 -7.722555739152255 3.00492882776509 0.9410593190520217 0.8802330827824423 0.1127695582567474 0.04604566430995212 0.29067915052857873 5.393373499863253 0.008036832279231786 0.011989808232454843 1.894280378966225e-08 7.722555739152255 -0.06082623626957939 TVHRS(ph)PLLLGAQR ddPTM_A549_PD325901_60min_R1 1 TVHRSPLLLGAQR 13 1 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 T(0.021)VHRS(0.979)PLLLGAQR 103.39 5.2025e-05 8937300.0 571.83 419.91 524.85 643.6 573.4 490.43 364.39 493.03 759.06 520.63 517.45 True False 629.8817606410029 455.2972893742735 560.4694771794416 683.353710278348 533.1263621226118 486.43610068154817 378.2570608518592 483.1961298754473 727.1593479022544 487.7573329487284 453.8069303858087 1.3879950226972124 1.0032841256681508 1.2350394840884265 1.5058247561300744 1.1747867351196442 1.071900996020487 0.833519797792158 1.0647614602638462 1.6023539950878498 1.07481243738181 1.0 8.825934831303465 -13.153614042279909 11.18551587613967 1.2429360554440483 1.2288650953549576 0.0 0.22949537544133677 0.0 0.0 0.0 0.035775425876257934 7.020789591721224e-14 13.153614042279909 -0.0140709600890907 TVIESSPES(ph)PVTITEPYR ddPTM_A549_MK2206_60min_R1 2 TVIESSPESPVTITEPYR 18 0 Q8TEQ6 Q8TEQ6 GEMIN5 Gem-associated protein 5 1 TVIES(0.002)S(0.017)PES(0.979)PVT(0.002)IT(0.001)EPYR;TVIESS(0.007)PES(0.919)PVT(0.041)IT(0.031)EPYR 94.544 3.3852e-06 3503600.0 1423.78 2060.2 1389.9699999999998 1600.19 2165.7 1691.62 1348.6100000000001 1697.62 2722.5 2088.08 2238.36 True False 1664.079255921062 2165.0553801743217 1587.088646822248 1992.2366218352581 1847.128398885443 1870.6261055935224 1593.6349803094074 1938.2628337432075 2105.8580969391364 1616.3812777654587 1682.513436406738 0.9890436652172924 1.2867982705672325 0.9432843818541597 1.184083632692991 1.0978387208783693 1.1118045568708963 0.9471751879217416 1.1520043714376873 1.2516144307510049 0.9606944246564149 1.0 10.716402310781463 TVIIEQS(ph)WGSPK ddPTM_A549_PD325901_60min_R1 1 TVIIEQSWGSPK 12 0 P10809;E7EXB4;E7ESH4;P10809-2;C9JL19;C9JCQ4;C9JL25 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 1 TVIIEQS(0.928)WGS(0.072)PK 167.32 2.4353000000000003e-15 36518000.0 10522.0 11048.0 11532.0 11911.0 10843.0 12119.0 12187.0 11858.0 13995.0 11864.0 13321.0 True False 11590.185694113 11979.053732959364 12314.63086754942 12646.715418156315 10081.42508631929 12020.306882041648 12650.78295398228 11621.482887578954 13406.838818923468 11114.905015277094 11682.601448776417 0.9920894541281219 1.0253755369026987 1.0541000582399565 1.0825256235614265 0.8629435088171371 1.0289066981139376 1.0828737939448636 0.9947684116876327 1.1475901902249384 0.951406676330743 1.0 13.5120739448079 -7.531887622061256 20.52878567719688 1.0651326680318376 1.005247802502777 0.0 0.07288107939470796 37.048752851016886 84422.44856505853 0.011359915943622635 0.01687951504903457 2.938409895855653e-08 7.531887622061256 -0.059884865529060693 TVIIEQSWGS(ph)PK ddPTM_A549_MK2206_60min_R1 3 TVIIEQSWGSPK 12 0 P10809;E7EXB4;E7ESH4;P10809-2;C9JL19;C9JCQ4;C9JL25 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 1 TVIIEQS(0.001)WGS(0.999)PK;TVIIEQS(0.132)WGS(0.868)PK;TVIIEQS(0.079)WGS(0.921)PK 185.32 2.9362e-19 46651600.0 9027.32 9573.15 8277.73 8200.27 15152.600000000002 11031.17 10257.25 9571.849999999999 15453.0 12881.95 13855.9 True False 10550.910919215963 10060.382444770317 9451.636585293163 10209.336518124115 12923.672612527846 12198.48108750198 12120.859553005435 10928.68905006122 11952.920173370247 9971.908548097168 10415.097626614177 1.0130400402829385 0.9659422124918503 0.9074938060245313 0.9802439577748872 1.2408594787919598 1.1712306043421659 1.163777814432814 1.0493122044420053 1.1476532051726909 0.957447438861782 1.0 13.346388742189845 -6.552556684727044 24.999118745961976 1.0951615422706784 0.9594255938127432 0.4053466954392425 0.07989475995331735 163.96772336388221 138117.18839266995 0.011904850457493713 0.024782157465487273 2.8018398977128467e-07 6.552556684727044 -0.13573594845793524 TVIIEQSWGS(ph)PK ddPTM_A549_PD325901_60min_R1 3 TVIIEQSWGSPK 12 0 P10809;E7EXB4;E7ESH4;P10809-2;C9JL19;C9JCQ4;C9JL25 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 1 TVIIEQS(0.022)WGS(0.978)PK;TVIIEQS(0.148)WGS(0.852)PK;TVIIEQS(0.147)WGS(0.853)PK 191.57 8.982900000000001e-20 35020400.0 20389.8 18463.7 20187.8 20411.9 19967.0 20240.4 20301.5 21183.8 23437.1 23049.7 24494.1 True False 22459.75748582258 20019.700797360776 21557.865507103226 21672.696704211627 18564.586802410515 20075.568893083248 21074.08469190706 20761.27249063038 22452.1201917107 21594.338008313578 21481.480980892906 1.045540459049347 0.9319516105601687 1.0035558314754118 1.0089014218102001 0.8642135436994834 0.9345523668009588 0.9810349998983677 0.9664730522582159 1.0451849298324052 1.0052536893299422 1.0 14.390805838894053 -8.742546572946903 22.57028460532803 1.0213373185540469 0.9644292745022162 0.18291418021735373 0.04635917699471706 83.40141956822191 99634.82608226313 0.007890605177667806 0.008936124023166509 1.8090618993578892e-09 8.742546572946903 -0.0569080440518307 TVIIEQSWGSPK ddPTM_A549_MK2206_60min_R1 2 TVIIEQSWGSPK 12 0 P10809;E7EXB4;E7ESH4;P10809-2;C9JL19;C9JCQ4;C9JL25 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 186.02 7.5053e-19 4824100.0 4465.6 5269.1 5521.0 4545.2 7051.200000000001 5899.1 5828.3 5876.7 7809.3 7549.4 7808.6 False True 5219.284106562174 5537.274683854252 6303.960818654814 5658.7742040417825 6013.977820668156 6523.338846494342 6887.226667262819 6709.740221638945 6040.5060188895495 5843.9852967139905 5869.509113603551 0.8892198658428908 0.9433965561141576 1.0740184053968584 0.9640966722287976 1.0246134223950305 1.1113942785054092 1.1733905738898234 1.1431518533786786 1.0291330845521112 0.9956514562980395 1.0 12.519024135700397 -5.602562109158649 4.214613655904618 1.0401245522462157 0.899493564416003 0.4099407782578348 0.06371050917499312 0.17620219179238422 5.7514222353142435 0.009803038959458365 0.044179063040704215 2.497111247685109e-06 5.602562109158649 -0.14063098783021266 TVIIEQSWGSPK ddPTM_A549_PD325901_60min_R1 2 TVIIEQSWGSPK 12 0 P10809;E7EXB4;E7ESH4;P10809-2;C9JL19;C9JCQ4;C9JL25 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 199.43 3.9289e-24 7666700.0 8006.7 9046.3 8780.0 8485.2 9311.8 9237.2 9467.2 9373.8 9727.1 9307.8 10252.9 False True 8819.534289778989 9808.663448992605 9375.86359842906 9009.311532712616 8657.771291966053 9161.975305783904 9827.479476650622 9186.832205396153 9318.303813901428 8720.10391952092 8991.858298488078 0.9808355511187199 1.0908383032061202 1.042705888726644 1.0019410041445462 0.9628456103919922 1.018919004464787 1.09293086594826 1.021683382948868 1.036304566261708 0.9697777289247483 1.0 13.134403585158722 -10.807502783481176 1.056553108636632 1.0000233166555397 1.0291720664833288 0.1258429836985402 0.03903212083685479 1.2213567854810512 2.422645022330719 0.026233565081518546 0.006550716360571555 1.5577480508772744e-11 10.807502783481176 0.029148749827789144 TVIIHDRPDITHPR ddPTM_A549_MK2206_60min_R1 1 TVIIHDRPDITHPR 14 1 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 0 75.669 0.0019147000000000003 2823300.0 149.5 164.88 139.71 100.88 180.04 262.58 192.33 62.68899999999999 282.31 228.73 217.55 False True 174.73194507592368 173.27168774057967 159.52297880352555 125.5956045286753 153.55635449754584 290.3660413135025 227.27387144015563 71.57535772701071 218.36723575643276 177.0597341401159 163.52633092544798 1.0685248307539192 1.0595950313321383 0.9755186085368259 0.7680451448882236 0.9390313696180985 1.775653129806239 1.3898304337530223 0.4376992825677846 1.3353643692769386 1.0827597802633866 1.0 7.353379146213912 TVIRGS(ph)QAELK ddPTM_A549_PD325901_60min_R1 1 TVIRGSQAELK 11 1 C9J1C6;Q9P0P0 C9J1C6 RNF181 E3 ubiquitin-protein ligase RNF181 1 T(0.302)VIRGS(0.698)QAELK 52.265 0.006424299999999999 3266400.0 1724.6 1714.0 1865.9 1722.4 1817.1 1755.0 1727.2 1760.5 1535.5 1970.1 1777.8 True False 1899.6801224165808 1858.4447952835235 1992.5311945682 1828.788736145784 1689.4731646546882 1740.707861868395 1792.9295411601056 1725.3854464144686 1470.9682748450869 1845.707549780631 1559.1418704027267 1.2184138970790985 1.191966446775935 1.2779665740446882 1.1729456894601948 1.0835916838140565 1.116452514625093 1.1499463744739222 1.1066250475133486 0.943447355733661 1.1837970519667236 1.0 10.606536493271351 -7.906470451728551 0.6528826294199958 0.9707416850081072 1.2163210502913169 0.22483926387005682 0.08106408739803712 0.25006021055746325 0.21806719206420894 0.01323928540242058 0.023275929792004466 1.240308009591988e-08 7.906470451728551 0.24557936528320967 TVIRLPSGS(ph)GAASPT(ph)GSAVDIR ddPTM_A549_PD325901_60min_R1 1 TVIRLPSGSGAASPTGSAVDIR 22 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 T(0.004)VIRLPS(0.454)GS(0.541)GAAS(0.171)PT(0.415)GS(0.415)AVDIR 54.324 0.0037472 5145300.0 1459.4 1577.5 1672.7 1906.8 1671.1 1923.8 1660.8 1800.3 1574.1 1943.4 1707.2 True False 1607.5572136465044 1710.4414612367314 1786.21948076222 2024.5787053429972 1553.7277009820318 1908.1332106338573 1724.002652824631 1764.3916041919722 1507.9460510802014 1820.693392337281 1497.2252228324537 1.073690977904663 1.1424075918257073 1.1930198967547756 1.3522205440226922 1.0377381286982907 1.274446343499375 1.1514651413386954 1.1784410102670408 1.0071604646276704 1.216045097672673 1.0 10.548075542413338 -8.76392489664973 7.701040018616399 1.0032248442291463 1.1788753967448766 0.05599698297571609 0.10346522751105036 0.07144968986642489 29.014691504075664 0.013061629163375964 0.014296257806559416 1.7221663666604337e-09 8.76392489664973 0.17565055251573036 TVIRLPSGSGAAS(ph)PTGSAVDIR ddPTM_A549_MK2206_60min_R1 1 TVIRLPSGSGAASPTGSAVDIR 22 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 TVIRLPSGS(0.002)GAAS(0.829)PT(0.168)GSAVDIR 107.19 1.2248e-10 15482000.0 916.6 1299.6 1604.5 1264.6 1574.2 1177.1 1471.3 882.18 2426.2 2035.2 1969.0 True False 1071.2996712815498 1365.7440889595907 1832.0422266856815 1574.4270567700512 1342.63726533013 1301.659940704258 1738.6161651843236 1007.2317165629423 1876.6695738452663 1575.446906492213 1480.0429583645455 0.7238301194077102 0.9227732757627146 1.2378304402124225 1.0637711884456384 0.9071610102545609 0.8794744323790428 1.174706555210737 0.6805422172853267 1.2679831779470747 1.064460256094924 1.0 10.531423335462298 -8.810352061945945 24.99999786451116 1.126547480818173 0.9651966507264292 0.1454318945832873 0.17045837340299022 160.00915253186852 81782.29468161771 0.030990422262092032 0.032991842656678365 1.5475615754820129e-09 8.810352061945945 -0.16135083009174378 TVIRLPSGSGAAS(ph)PTGSAVDIR ddPTM_A549_PD325901_60min_R1 3 TVIRLPSGSGAASPTGSAVDIR 22 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 TVIRLPS(0.003)GS(0.003)GAAS(0.733)PT(0.217)GS(0.045)AVDIR;TVIRLPSGSGAAS(0.974)PT(0.026)GSAVDIR;TVIRLPS(0.12)GS(0.12)GAAS(0.616)PT(0.12)GS(0.024)AVDIR 197.35 6.674899999999999e-61 86955400.0 3117.06 3511.25 4673.13 5045.1 5209.3 7239.099999999999 4539.8 5494.75 5256.7 4703.4 4886.2 True False 3433.501636541707 3807.1553602329477 4990.276703613535 5356.724368746571 4843.416739109386 7180.147169715956 4712.564573273879 5385.1529007020135 5035.77917966667 4406.4265213127355 4285.228376173812 0.8012412257027492 0.8884369807221978 1.164529930623965 1.2500440813213962 1.1302587199410754 1.6755576458043888 1.0997230858164033 1.2566781576085568 1.1751483789442767 1.0282827738686682 1.0 12.06515637777319 -5.693125282639706 4.116840515077164 1.1552440878929442 0.8226786679296395 0.3616259898065062 0.17467924701024984 0.1971054861894223 6.4017780073597 0.025496863147565177 0.10826001000999691 2.027097870261897e-06 5.693125282639706 -0.3325654199633047 TVIRLPSGSGAASPT(ph)GSAVDIR ddPTM_A549_MK2206_60min_R1 1 TVIRLPSGSGAASPTGSAVDIR 22 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 TVIRLPSGS(0.001)GAAS(0.407)PT(0.538)GS(0.054)AVDIR 77.51 6.0951000000000006e-05 18974000.0 958.01 1280.8 1277.7 1083.5 1517.8 1280.2 1118.9 1007.0 1940.1 1513.7 1600.4 True False 1119.6986669042517 1345.9872492608838 1458.897072630911 1348.9575486401636 1294.533630617502 1415.6699142720172 1322.1896467238084 1149.7453338081605 1500.670447703074 1171.754118689693 1202.9765112070193 0.9307735076063872 1.1188807401653862 1.212739450055522 1.1213498651662557 1.0761088172192306 1.1768059484815625 1.09909847316734 0.9557504432522554 1.2474644631235237 0.9740457172467991 1.0 10.232392758018985 -5.260701449586707 22.875617085933428 1.1152877306438667 0.9307733622854866 0.19828775297695733 0.09110008005476823 21.885286183473088 677944.9867019617 0.013389687392815194 0.11077149706288135 5.486540007731518e-06 5.260701449586707 -0.1845143683583801 TVKEPEGPPPS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 TVKEPEGPPPSPGK 14 1 P58012 P58012 FOXL2 Forkhead box protein L2 1 TVKEPEGPPPS(1)PGK;TVKEPEGPPPS(1)PGK 68.567 0.00089892 34851000.0 3284.1000000000004 3966.7 3314.2 3219.5 4043.0 2982.6800000000003 2807.9 2793.5 4525.8 4882.5 4746.1 True False 3838.375791463818 4168.5880868544255 3784.20339525191 4008.277644528849 3448.2800557297132 3298.305217857254 3318.0590839536876 3189.487179734955 3500.7135262175007 3779.5398589564816 3567.512384303696 1.075925008235953 1.1684859470132007 1.0607400865380618 1.1235497491653925 0.9665783000225648 0.9245392482361388 0.93007640241207 0.8940367505850934 0.981275788030871 1.0594328629623437 1.0 11.800702722560047 -6.763905156799703 24.999509216848903 0.9722559301001941 1.1082377562031647 0.6638590917402244 0.04845037618380907 28.83007098349357 292301.0817337166 0.006539010020197139 0.01278540984700332 1.7222446455237764e-07 6.763905156799703 0.1359818261029706 TVKEPEGPPPS(ph)PGK ddPTM_A549_PD325901_60min_R1 4 TVKEPEGPPPSPGK 14 1 P58012 P58012 FOXL2 Forkhead box protein L2 1 TVKEPEGPPPS(1)PGK;TVKEPEGPPPS(1)PGK;TVKEPEGPPPS(1)PGK;TVKEPEGPPPS(1)PGK 125.28 1.7694000000000002e-07 63091800.0 11424.910000000002 11911.26 13364.599999999999 13039.500000000002 14258.900000000001 14839.6 12759.0 13132.4 14213.4 14771.699999999999 15096.8 True False 12584.758452625796 12915.06368277061 14271.602123868455 13844.92030014686 13257.404054534556 14718.751217653698 13244.550726992702 12870.463979831497 13616.06022642993 13839.01234104591 13239.989306500105 0.9505112248427099 0.9754587699274065 1.077916438864636 1.0456896889901388 1.0013153143579883 1.1116890563066846 1.0003445184423494 0.9720902095829344 1.028404170972041 1.0452434681538387 1.0 13.692614336478153 -5.538537100342675 24.875762339415772 1.0213373394223042 0.9567480855997837 0.30052982904776415 0.03854176904204725 177.4471701265402 281902.9662734668 0.0051311988241693 0.019884913830029268 2.8937626019277445e-06 5.538537100342675 -0.06458925382252045 TVKPVENKDDDDSIADFLNS(ph)DEEEDR ddPTM_A549_PD325901_60min_R1 2 TVKPVENKDDDDSIADFLNSDEEEDR 26 2 Q15649-2;Q15649 Q15649-2 ZNHIT3 Zinc finger HIT domain-containing protein 3 1 TVKPVENKDDDDSIADFLNS(1)DEEEDR;TVKPVENKDDDDSIADFLNS(1)DEEEDR 146.58 4.9088e-33 21200400.0 3590.7 3843.3 4017.6000000000004 4160.1 4512.799999999999 4541.299999999999 4253.9 4223.4 4557.6 3681.8999999999996 5008.1 True False 3955.2252206663675 4167.188379062522 4290.258495791413 4417.0599287274 4195.836496314827 4504.317158463215 4415.784492323398 4139.160973806793 4366.059921480932 3449.4242056430135 4392.135448961578 0.9005244183900322 0.9487841227773975 0.9768046877529127 1.0056747976139295 0.9553067169881654 1.02554149588628 1.0053844066597288 0.9424028520762958 0.9940631322090008 0.7853638044014678 1.0 12.100706830929603 -5.282210381709177 1.2206105632420026 0.9936810971001385 0.8586307359236913 0.0 0.06666234531720201 0.6864550653121034 0.8618549683521938 0.003109817266564084 0.11556864858908875 5.221431901875348e-06 5.282210381709177 -0.1350503611764472 TVKQEQINTEPLEDTVLS(ph)PTK ddPTM_A549_MK2206_60min_R1 2 TVKQEQINTEPLEDTVLSPTK 21 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 TVKQEQINTEPLEDT(0.001)VLS(0.95)PT(0.049)K;TVKQEQINTEPLEDT(0.39)VLS(0.506)PT(0.104)K 128.4 6.1202e-18 51639000.0 2760.87 3533.4 3542.7 3303.8 4865.4 2911.0 3377.0 2595.74 4604.2 4819.5 4990.0 True False 3226.8373592091316 3713.234967628363 4045.108131180657 4113.231148313217 4149.706105156406 3219.0400878345863 3990.5571874039697 2963.6940941203534 3561.356051396576 3730.7716027118827 3750.8452830061406 0.8602960441554018 0.9899728427754197 1.0784524089830432 1.096614453000482 1.1063389161790742 0.8582172403695267 1.0639087689070743 0.7901403205159879 0.9494809256814514 0.9946482249254041 1.0 11.873000039785369 -7.247760973146479 24.96343159570842 0.9600313460699597 1.03111464109714 0.15160072033515626 0.09341410998874056 1355.1019315654219 2473094.601738572 0.013502836002300466 0.02330974238174811 5.652479902183519e-08 7.247760973146479 0.07108329502718025 TVKQEQINTEPLEDTVLS(ph)PTK ddPTM_A549_PD325901_60min_R1 4 TVKQEQINTEPLEDTVLSPTK 21 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 TVKQEQINTEPLEDT(0.085)VLS(0.911)PT(0.004)K;TVKQEQINTEPLEDT(0.041)VLS(0.956)PT(0.003)K;TVKQEQINTEPLEDT(0.083)VLS(0.764)PT(0.153)K;TVKQEQINTEPLEDT(0.004)VLS(0.994)PT(0.002)K 207.72 2.7781999999999997e-58 142084500.0 8205.8 8137.799999999999 9385.699999999999 9655.5 10131.7 12479.7 10428.1 10491.6 10961.0 10248.0 11190.4 True False 9038.846775209318 8823.600965611584 10022.670042799047 10251.898305768476 9420.084344467501 12378.069460831342 10824.94705197527 10282.336807499023 10500.347287904258 9600.939531065378 9814.051741790232 0.9210107112763699 0.8990783009670607 1.0212571022140098 1.0446142506171845 0.9598568045402556 1.2612598533715693 1.1030048889879438 1.04771577305984 1.0699298887116766 0.9782849921386313 1.0 13.260633162286629 -5.847792112745452 3.7804627988729713 1.0509870148091889 0.9086169587219552 0.3503454826268888 0.07626018428906442 0.18663944553544942 5.068986481390749 0.010526496754644439 0.038004559834978274 1.419736956040118e-06 5.847792112745452 -0.14237005608723363 TVKQEQINTEPLEDTVLS(ph)PTKK ddPTM_A549_PD325901_60min_R1 2 TVKQEQINTEPLEDTVLSPTKK 22 2 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 TVKQEQINTEPLEDT(0.003)VLS(0.828)PT(0.169)KK;TVKQEQINTEPLEDT(0.001)VLS(0.953)PT(0.046)KK 110.75 4.0688e-11 29795000.0 4410.3 4933.3 5540.0 5773.4 6203.9 7049.4 6005.2 7001.5 5601.8 5945.1 5832.2 True False 4858.030409308741 5349.046504417858 5915.977714726311 6130.0098056572615 5768.159466293115 6991.9920236211165 6233.731172171529 6861.849589929507 5366.375826784247 5569.725371402888 5114.876373361898 0.9497845215984491 1.0457821683189668 1.1566218385133455 1.1984668559307012 1.1277221667240078 1.3669914017932423 1.218745228063886 1.341547495784216 1.0491701920171814 1.0889266846037235 1.0 12.320483655093469 -8.971899251011655 23.974379401662176 1.021692554456011 1.1788135751274766 0.20026804476629245 0.11366596782955052 111.59899897372846 95212.67129979524 0.020365253969671232 0.02133057243115621 1.0668435822271294e-09 8.971899251011655 0.15712102067146572 TVLDTS(ph)YALIGETVNNYR ddPTM_A549_PD325901_60min_R1 1 TVLDTSYALIGETVNNYR 18 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 TVLDT(0.015)S(0.985)YALIGETVNNYR 243.9 9.5737e-75 4017900.0 1933.7 2542.1 2754.7 2029.6 2680.0 2644.7 2494.7 2341.9 3531.5 2801.5 2788.8 True False 2130.007800485297 2756.331688500727 2941.6505073567805 2154.9637824439633 2491.7660454980833 2623.1624400474902 2589.63717365222 2295.1889673149917 3383.0833361220607 2624.612811893018 2445.7952796597624 0.8708855635626237 1.1269674577522955 1.2027378300304827 0.8810891902382537 1.0187958355389073 1.0725192177214447 1.0588119108695262 0.9384223554615243 1.383224247858016 1.073112223954464 1.0 11.256087935714598 -8.728817787230994 24.999988594176376 1.1809672254345434 1.0290536709750917 0.15806481953884477 0.12899892410656616 261.44742427006537 200363.6510602001 0.027039825688153517 0.03065915884825782 1.8671629141481382e-09 8.728817787230994 -0.15191355445945165 TVLGS(ph)RELCDSEGK ddPTM_A549_MK2206_60min_R1 2 TVLGSRELCDSEGK 14 1 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 T(0.003)VLGS(0.997)RELCDSEGK;T(0.011)VLGS(0.989)RELCDSEGK 114.99 1.1494e-06 26130000.0 9413.8 9786.7 8008.9 6312.6 6853.700000000001 6705.0 6140.9 5900.3 7616.700000000001 8622.7 8613.9 True False 11002.61929468716 10284.80122762453 9144.68244892675 7859.18728338338 5845.529809041494 7414.518649581211 7256.622040902878 6736.685593910917 5891.529611370553 6674.826081274769 6474.830898454225 1.6992906019080563 1.5884277734697105 1.4123430545668636 1.2138057976556038 0.9028081042915009 1.145129311616667 1.120743098114778 1.0404419357915906 0.909912506406472 1.0308880935976708 1.0 12.660626799446264 -6.059214928935978 0.9665719589678795 0.978818601299641 1.7685939528423216 0.8958534972119118 0.08254046953524528 0.1739891306632735 0.2395662051623431 0.01372384979216808 0.10658765225306167 8.725394485841475e-07 6.059214928935978 0.7897753515426805 up TVLGS(ph)RELCDSEGK ddPTM_A549_PD325901_60min_R1 2 TVLGSRELCDSEGK 14 1 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 T(0.12)VLGS(0.88)RELCDSEGK;TVLGS(1)RELCDSEGK 125.12 1.9170000000000003e-07 5969400.0 1219.9 1413.9 1075.1 952.14 1243.0 1371.7 1609.0 2813.8 2896.1 6808.3 7843.0 True False 1343.743349957084 1533.0543150824813 1148.0627511014907 1010.9515253331663 1155.6959681172068 1360.529329985686 1670.2313754785835 2757.6765516166024 2774.38698845904 6378.422776088252 6878.360720873317 0.1953580808693724 0.22288076727790973 0.16690935495975642 0.1469756481751963 0.16801909859279274 0.19779848501649172 0.2428240453295856 0.40092060645322936 0.4033500278692548 0.9273172831328931 1.0 12.74784906155746 -10.270438750968522 0.3787646398142412 1.1676278441880024 0.15030771980671426 0.9807926277672796 0.040499081439234155 0.16880694683593628 0.03909198829190159 0.06859690272992466 0.015263104098000198 5.364895278171373e-11 10.270438750968522 -1.0173201243812882 TVLPTVPES(ph)PEEEVK ddPTM_A549_MK2206_60min_R1 2 TVLPTVPESPEEEVK 15 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK 338.23 2.901499999999999e-186 30836000.0 14779.8 15705.900000000001 15959.9 13729.5 22020.1 16171.2 15449.0 15430.300000000001 23620.8 23079.0 22870.6 True False 17274.268908582864 16505.263224677165 18223.253807217716 17093.22811634067 18780.972459850076 17882.425650426216 18255.883324904917 17617.592278311895 18270.72651466665 17865.43787093838 17191.198823551145 1.0048321286888915 0.9600996064373195 1.0600339158577297 0.9943011125509025 1.0924760194222765 1.0402081805911128 1.0619319520576542 1.0248030087451847 1.0627953700143704 1.0392200133514573 1.0 14.0693825338178 TVLPTVPES(ph)PEEEVK ddPTM_A549_PD325901_60min_R1 4 TVLPTVPESPEEEVK 15 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK 205.61 3.8979999999999995e-39 53822500.0 9799.9 10760.3 9712.9 10378.1 12754.400000000001 10515.6 10263.800000000001 11066.4 10269.6 11735.699999999999 11858.000000000002 True False 10794.778633694927 11667.108244276134 10372.07580241249 11019.131666624799 11858.574944291324 10429.964440036063 10654.394525566868 10845.67197057715 9838.004425496 10994.705899172912 10399.541174055306 1.038005278600719 1.1218868264479922 0.9973589823644011 1.0595786373840455 1.140297898322284 1.0029254431009569 1.0245062111150989 1.0428990845898902 0.9460036996670368 1.0572299022770753 1.0 13.344232257866077 -8.128626105413968 1.2194797818762177 0.9759743150917595 1.0656558094728723 0.11630471392723829 0.05015932356342724 0.30322833755245787 0.8885374718186237 0.008184702836872821 0.011337708382694534 7.436590964177177e-09 8.128626105413968 0.08968149438111284 TVLSSAR ddPTM_A549_PD325901_60min_R1 1 TVLSSAR 7 0 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 0 132.72 0.015631 282820000.0 7055.6 5575.1 5444.3 7218.4 9242.1 11914.0 8341.5 7127.0 12750.0 5910.2 6057.0 False True 7771.879317941804 6044.933242815151 5813.7829372354645 7664.26417382415 8592.966779514109 11816.976334074112 8658.940347143945 6984.84639397666 12214.161839319342 5537.028963358956 5312.027398486506 1.4630721445744341 1.1379710211090897 1.0944565042891001 1.4428133740439364 1.6176435351147478 2.2245699141990465 1.6300631938779224 1.3149115902464603 2.2993408962460133 1.0423570038318246 1.0 12.375046872528904 -6.554944881282372 3.4275106535275315 1.6516363806428487 1.2246201133984054 0.12186164926109966 0.39793867351868834 0.39253710668574315 9.623625371037111 0.07127962329667088 0.16301878314966722 2.7864747931353267e-07 6.554944881282372 -0.4270162672444433 TVMDGGLES(ph)DGPNMTENGLEDESRPQR ddPTM_A549_MK2206_60min_R1 9 TVMDGGLESDGPNMTENGLEDESRPQR 27 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.012)VMDGGLES(0.781)DGPNMT(0.206)ENGLEDESRPQR;T(0.054)VMDGGLES(0.932)DGPNMT(0.014)ENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;T(0.018)VMDGGLES(0.982)DGPNMTENGLEDESRPQR;T(0.036)VMDGGLES(0.861)DGPNMT(0.103)ENGLEDES(0.001)RPQR;TVMDGGLES(0.921)DGPNMT(0.079)ENGLEDESRPQR;T(0.002)VMDGGLES(0.723)DGPNMT(0.275)ENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(0.975)DGPNMT(0.025)ENGLEDESRPQR 145.57 3.4584e-33 163778600.0 9291.27 9494.29 9324.59 8685.720000000001 13674.310000000001 10272.67 10000.15 9976.300000000001 14844.23 13858.13 15462.25 True False 10859.40922625805 9977.50880760861 10646.957074809012 10813.721789916794 11662.837113248926 11359.71712095353 11817.047810961747 11390.4710761374 11482.035606364308 10727.568808110722 11622.546588609559 0.9343399179746541 0.8584615025236264 0.9160606063083753 0.9304089863158357 1.0034665831908864 0.9773862409883898 1.0167348197634076 0.9800323009503271 0.9879104823393046 0.9229964127331662 1.0 13.504638588415254 -6.569535276128769 2.4091749803192353 0.9942252517793099 0.8981698705226062 0.5861350621328204 0.02957033182201835 0.08040342188810104 0.9363207143198805 0.0026396196945010727 0.00646149887944233 2.6944164660132325e-07 6.569535276128769 -0.09605538125670365 TVMDGGLES(ph)DGPNMTENGLEDESRPQR ddPTM_A549_PD325901_60min_R1 8 TVMDGGLESDGPNMTENGLEDESRPQR 27 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.168)VMDGGLES(0.799)DGPNMT(0.033)ENGLEDESRPQR;T(0.112)VMDGGLES(0.724)DGPNMT(0.163)ENGLEDES(0.001)RPQR;TVMDGGLES(0.978)DGPNMT(0.022)ENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(0.992)DGPNMT(0.008)ENGLEDESRPQR;TVMDGGLES(0.595)DGPNMT(0.405)ENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR 233.44 6.313499999999998e-97 267082000.0 15348.310000000001 14924.919999999998 15418.75 15422.669999999998 18948.38 17043.45 16668.3 17940.83 17544.49 17334.69 17822.07 True False 16906.45913237136 16182.6953874113 16465.159095475872 16375.293298475082 17617.51115716229 16904.653793937832 17302.621277743732 17582.98607134114 16807.15609790744 16240.174715043297 15630.068373410013 1.0816625192205016 1.0353566600477206 1.0534284753025471 1.0476789293086428 1.1271550921129259 1.081547015027532 1.1070086748423364 1.1249462031307198 1.0753091858830186 1.0390341441289663 1.0 13.932036468940373 -10.358684480313144 0.8952207281453836 1.0033287375805018 1.0808805870938205 0.3650790997538702 0.030183637767527728 0.35827153697220365 0.5487857556530887 0.01616405664692274 0.005831486783935618 4.3784008524268924e-11 10.358684480313144 0.07755184951331873 TVNLSVT(ph)PSPAPR ddPTM_A549_MK2206_60min_R1 1 TVNLSVTPSPAPR 13 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 TVNLS(0.002)VT(0.936)PS(0.062)PAPR 156.08 2.4612999999999998e-18 7376100.0 3696.0 4152.3 3321.6 3520.3 4403.5 3311.8 3294.5 3385.0 6137.6 5557.4 4928.6 True False 4319.79444147568 4363.634334092731 3792.652826524875 4382.773658032273 3755.750983281175 3662.252477805081 3893.0680053012643 3864.834116127729 4747.443399733207 4301.979480218075 3704.6925975599315 1.1660331667790416 1.1778667781955259 1.0237429224284027 1.1830330162667084 1.0137820843097407 0.988544226373113 1.0508477836637256 1.0432266684348583 1.2814675643695985 1.1612244111836816 1.0 11.855138122368668 -11.32036182003218 1.9223225495667073 0.9993836329085218 1.1297398703074168 0.0 0.10094892757145774 0.5178400506365668 3.4567662659453915 0.08236456227728077 0.01600116114047283 4.7823150140445434e-12 11.32036182003218 0.13035623739889501 TVNLSVT(ph)PSPAPR ddPTM_A549_PD325901_60min_R1 1 TVNLSVTPSPAPR 13 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 TVNLSVT(0.997)PS(0.003)PAPR 177.21 4.3217e-22 9812300.0 3130.3 3878.8 3565.2 3713.5 4717.7 4625.7 4039.8 4167.4 5022.5 4056.2 4527.5 True False 3448.085751594934 4205.680088649782 3807.155911289212 3942.874461029592 4386.345027181455 4588.0298328459485 4193.53679966338 4084.2779377379425 4811.42179121423 3800.090839764577 3970.646202187165 0.8683941041374105 1.0591928553929466 0.9588252685903124 0.9930057376700359 1.1046929904672216 1.1554869407198023 1.0561345902219745 1.028617945232236 1.2117477977675115 0.9570459432198618 1.0 11.955158102313804 -6.707373961940303 4.802800478025364 1.0978982315555998 0.9729993638535039 0.24728475762112978 0.08033207431934243 0.1945042361851998 9.314489589728977 0.012372472718156752 0.025920545841969865 1.961670395826079e-07 6.707373961940303 -0.1248988677020959 TVNLSVTPS(ph)PAPR ddPTM_A549_PD325901_60min_R1 1 TVNLSVTPSPAPR 13 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 TVNLS(0.033)VT(0.34)PS(0.626)PAPR 140.1 1.9265e-09 9427000.0 4023.0 4150.0 3880.1 4214.8 4565.1 4105.3 3878.3 4627.9 5207.0 4252.5 4634.2 True False 4431.4119984239305 4499.735064426265 4143.426918936746 4475.138623494686 4244.463124740033 4071.867797907879 4025.890828787191 4535.592903982683 4988.167897830261 3983.9964242638107 4064.2227786141925 1.0903467255146237 1.107157582036035 1.019488139464038 1.1011056399375347 1.0443480478172258 1.0018810532074949 0.9905684427466174 1.115980385683783 1.22733623857379 0.980260345281137 1.0 11.98876376964446 -8.321912631451758 24.94617590309883 1.1109998592730217 1.0514870710197015 0.0 0.0721682178593201 452.06893296114146 186484.64577497536 0.01448494776256997 0.01751145155771837 4.7652684174394815e-09 8.321912631451758 -0.05951278825332018 TVNSGGS(ph)SEPS(ph)PTEVDVSR ddPTM_A549_PD325901_60min_R1 1 TVNSGGSSEPSPTEVDVSR 19 0 Q6PIJ6;Q6PIJ6-2 Q6PIJ6 FBXO38 F-box only protein 38 2 T(0.041)VNS(0.138)GGS(0.635)S(0.249)EPS(0.727)PT(0.209)EVDVS(0.002)R 45.608000000000004 0.037181 1067500.0 586.67 572.37 336.28 351.56 405.95 726.48 496.91 392.63 300.82 524.23 424.2 True False 646.2283065163722 620.6056286326894 359.101983015914 373.27506274931017 377.43747245147256 720.5637877436762 515.8201819695854 384.79868663772345 288.1775815297289 491.13002833434825 372.026089225355 1.7370510435490427 1.6681777074423327 0.9652602153887864 1.0033572202598904 1.0145457089780594 1.9368635926691538 1.3865161527882177 1.0343325314602638 0.7746165924271111 1.320149426501231 1.0 8.539259987119467 -8.38042099249738 3.864640986819611 0.8942551850252694 1.3734417197946813 0.1810090057180167 0.3273242004384821 0.21417306120943813 5.670114965238545 0.053213202579677966 0.06471902428382538 4.164654781575849e-09 8.38042099249738 0.479186534769412 TVNSGGSSEPS(ph)PTEVDVSR ddPTM_A549_MK2206_60min_R1 2 TVNSGGSSEPSPTEVDVSR 19 0 Q6PIJ6;Q6PIJ6-2 Q6PIJ6 FBXO38 F-box only protein 38 1 T(0.001)VNS(0.003)GGS(0.003)S(0.003)EPS(0.944)PT(0.045)EVDVS(0.001)R;TVNSGGS(0.001)S(0.022)EPS(0.77)PT(0.205)EVDVS(0.002)R 80.975 0.00023549 3470700.0 676.98 737.75 576.1 636.81 974.8199999999999 798.78 577.55 785.53 1009.21 1117.6100000000001 1495.29 True False 791.2376734280859 775.2983238149723 657.7996427507773 792.8284785874877 831.4252693362457 883.306369412749 682.483359071709 896.881283084732 780.6255463772073 865.1411247861446 1123.9682250954409 0.7039680088473129 0.6897866919228419 0.5852475435370255 0.7053833559397689 0.7397231085119385 0.7858819757451272 0.6072087660785574 0.7979596425055291 0.6945263477630083 0.7697202691941597 1.0 10.134385535394234 -11.158978154173544 0.42747346917616014 1.139396897815917 0.6851235762183973 0.2446588123813419 0.09163387333533296 0.9445870373442439 0.17217365826898376 0.19741675366380385 0.015851163299012497 6.934606875116229e-12 11.158978154173544 -0.45427332159751976 TVNSGGSSEPS(ph)PTEVDVSR ddPTM_A549_PD325901_60min_R1 2 TVNSGGSSEPSPTEVDVSR 19 0 Q6PIJ6;Q6PIJ6-2 Q6PIJ6 FBXO38 F-box only protein 38 1 TVNSGGSS(0.006)EPS(0.749)PT(0.245)EVDVSR;TVNS(0.001)GGS(0.014)S(0.081)EPS(0.719)PT(0.184)EVDVSR 108.49 9.997599999999999e-10 3915600.0 863.6600000000001 838.68 1130.02 1105.03 1314.55 1312.37 1166.7 1374.88 1073.6 1137.6399999999999 1353.35 True False 951.3381274071116 909.3585069477156 1206.7099525622789 1173.2851933947843 1222.2205429513074 1301.6824938348873 1211.0994069427372 1347.456939827506 1028.4803255445688 1065.8092162491428 1186.896529592491 0.8015341722616242 0.76616493879204 1.0166934711457878 0.9885319942738563 1.0297616620135746 1.09671101176933 1.0203917331855001 1.1352775125984584 0.8665290527875139 0.8979798909809582 1.0 10.212978454898561 -5.7578316354099925 24.99461819877868 0.9788383200711372 0.783849481650302 0.5347319141666209 0.07653806688752374 64.48901465266137 446761.7822558852 0.01229414960774559 0.04413587417324968 1.746499093627773e-06 5.7578316354099925 -0.19498883842083525 TVNSTRET(ph)PPK ddPTM_A549_MK2206_60min_R1 3 TVNSTRETPPK 11 1 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK9;B0QZK8;Q5SSJ5-5;B0QZK7;B0QZK5;B0QZK6 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 TVNST(0.001)RET(0.999)PPK;TVNSTRET(1)PPK;T(0.011)VNS(0.007)T(0.006)RET(0.976)PPK 108.58 4.6611000000000005e-05 1704820000.0 25192.1 26479.6 25338.1 22384.3 32159.1 24568.3 24067.3 26071.7 34550.1 36232.9 36088.4 True False 29443.910592288812 27827.298536483842 28931.423586154262 27868.45450486942 27428.538990902183 27168.101198882345 28440.01687782277 29767.44331623259 26724.557515172404 28047.862725158066 27126.654290829418 1.0854235939535963 1.0258286273767012 1.0665312159758298 1.0273458055714146 1.0111287111501555 1.0015279034269604 1.0484159444402015 1.0973503402627847 0.9851770597528886 1.0339595301526026 1.0 14.727423501047618 -2.0000000000067333 0.12593386941289156 0.9766253785163024 1.267410358065018 0.014878331814679457 0.0343108434259221 72.06114270106707 0.5946115100282013 0.10570104066076047 3.7272362979489446 0.009999999999844961 2.0000000000067333 0.2907849795487156 TVNSTRET(ph)PPK ddPTM_A549_PD325901_60min_R1 6 TVNSTRETPPK 11 1 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK9;B0QZK8;Q5SSJ5-5;B0QZK7;B0QZK5;B0QZK6 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 TVNSTRET(1)PPK;TVNST(0.002)RET(0.998)PPK;TVNS(0.003)T(0.003)RET(0.994)PPK;T(0.015)VNS(0.006)T(0.011)RET(0.968)PPK;T(0.015)VNS(0.014)T(0.012)RET(0.959)PPK;T(0.001)VNS(0.001)T(0.01)RET(0.987)PPK 84.169 0.00022509 2647998000.0 33395.4 35820.3 34499.6 34343.9 42524.6 35086.200000000004 34314.1 37445.2 37472.6 38816.4 41305.200000000004 True False 36785.676423605895 38839.00239235381 36840.95031894797 36465.24470234392 39537.818797905886 34800.46961999254 35619.94185289601 36698.32611080886 35897.756936476704 36365.52587955175 36224.92225523607 1.0154797894228405 1.0721624774982061 1.0170056421204012 1.0066341742686036 1.0914535169827992 0.9606775516257281 0.9832993319329314 1.0130684574624411 0.990968501838204 1.0038814058267675 1.0 15.144694973069246 -7.277141090266003 24.999979543614867 0.9938528518872242 1.0391116204539153 0.45517185980536545 0.026391895889152642 572.0176507280112 910753.8705732403 0.0036468683936483532 0.005843312088190893 5.2827360241152414e-08 7.277141090266003 0.04525876856669109 TVNSTRET(ph)PPKSK ddPTM_A549_MK2206_60min_R1 3 TVNSTRETPPKSK 13 2 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK9;B0QZK8;Q5SSJ5-5;B0QZK7;B0QZK5;B0QZK6 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 TVNSTRET(1)PPKSK;TVNST(0.001)RET(0.999)PPKSK;T(0.131)VNS(0.12)T(0.12)RET(0.629)PPKSK 125.45 9.236399999999999e-07 1929723000.0 20302.699999999997 23626.6 21998.600000000002 21762.2 29625.0 22331.6 20893.199999999997 19849.6 32809.3 33655.0 33894.4 True False 23729.299406641858 24829.093022632092 25118.332270469105 27093.939976942274 25267.201744000184 24694.715089483656 24689.223994038686 22663.341586850518 25378.045935686045 26052.31212558738 25477.485042148957 0.9313831160094895 0.9745503915145396 0.9859031308982937 1.0634464089418212 0.991746308640712 0.9692760116875618 0.9690604843136518 0.8895439070754892 0.9960969810678564 1.0225621595886507 1.0 14.636935251480601 -8.959723186366192 24.999995038641583 0.9982782906164077 0.9738860563553583 0.11559208881305716 0.040499387338852784 330.26660536375243 204999.00073386423 0.007203892623078147 0.007659576954637556 1.0971772998089028e-09 8.959723186366192 -0.024392234261049417 TVNSTRET(ph)PPKSK ddPTM_A549_PD325901_60min_R1 4 TVNSTRETPPKSK 13 2 Q5SSJ5;Q5SSJ5-2;Q5SWC8;B0QZK9;B0QZK8;Q5SSJ5-5;B0QZK7;B0QZK5;B0QZK6 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 1 TVNSTRET(1)PPKSK;TVNS(0.034)T(0.025)RET(0.941)PPKSK;TVNS(0.005)T(0.03)RET(0.964)PPKSK;T(0.027)VNS(0.044)T(0.044)RET(0.881)PPKS(0.003)K 112.3 1.2033e-05 2670750000.0 32807.3 35281.4 38605.799999999996 41523.799999999996 44869.899999999994 44299.100000000006 44332.9 48215.6 47284.4 43005.700000000004 47650.0 True False 36137.87294454223 38254.687398084054 41225.82174353447 44088.63081860795 41718.39301675163 43938.3428169198 46020.01276939372 47253.90203359351 45297.20110393032 40290.312762601345 41789.3520782371 0.8647627002420546 0.9154170977923869 0.986514977938696 1.0550206841222662 0.9983019822524977 1.051424361274121 1.1012377670569304 1.1307641703830633 1.083941215913707 0.9641286777351971 1.0 15.350847770160941 -5.6941476810754 1.1786386702061644 1.051743154910937 0.8363053618448013 0.6459711166557602 0.04570100925883557 0.3928808741105386 0.7159370076841794 0.00700660448095366 0.08545879686842417 2.0223313715119845e-06 5.6941476810754 -0.21543779306613575 TVPLFPHPPVPSLSTSESKPPPQPS(ph)PPTSPVR ddPTM_A549_MK2206_60min_R1 1 TVPLFPHPPVPSLSTSESKPPPQPSPPTSPVR 32 1 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 TVPLFPHPPVPS(0.002)LS(0.002)T(0.002)S(0.002)ES(0.002)KPPPQPS(0.633)PPT(0.179)S(0.179)PVR 54.388999999999996 0.0022254 5402900.0 932.65 876.63 1202.0 1045.1 1654.7 1201.3 930.75 827.82 1494.4 1496.9 1811.9 True False 1090.058518896724 921.2467226105307 1372.4616743385427 1301.1495469163222 1411.295821967836 1328.420768641597 1099.8552271768565 945.1660200924255 1155.9207860664267 1158.749250357799 1361.9552241039721 0.8003629631905642 0.6764148382459616 1.0077142405628516 0.9553541290407297 1.0362277679843146 0.9753777107581219 0.8075560838649811 0.6939773080383377 0.8487215773388621 0.8507983447988446 1.0 10.411463558478292 -10.68647047284046 1.0939900922369588 0.9957314263145639 0.8697115479372204 0.0 0.12162390760728249 0.7922993692926259 1.7676421676338592 0.07033305099520529 0.02121783146956492 2.0583988338459856e-11 10.68647047284046 -0.12601987837734352 TVPLFPHPPVPSLSTSESKPPPQPS(ph)PPTSPVR ddPTM_A549_PD325901_60min_R1 2 TVPLFPHPPVPSLSTSESKPPPQPSPPTSPVR 32 1 E9PKC0;Q6IQ23;Q6IQ23-2;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 TVPLFPHPPVPS(0.004)LS(0.004)T(0.004)S(0.004)ES(0.004)KPPPQPS(0.883)PPT(0.045)S(0.052)PVR;TVPLFPHPPVPS(0.102)LS(0.102)T(0.102)S(0.102)ES(0.102)KPPPQPS(0.433)PPT(0.029)S(0.029)PVR 72.943 2.7596999999999997e-05 32917000.0 2974.3999999999996 2968.6 3098.0 3616.6000000000004 4891.799999999999 3988.2 3980.1 4289.3 4245.0 3612.5 3661.2 True False 3276.358898362452 3218.774340302604 3308.2489097873854 3839.9891681054564 4548.216843793849 3955.7214214834935 4131.564883494288 4203.746546609244 4066.5974123851447 3384.406133486893 3210.8956102590073 1.020387859354345 1.0024537484240919 1.030319671314548 1.1959246372994676 1.4164947715092384 1.2319682423946523 1.2867328574288388 1.309213084716307 1.2664994151140005 1.054038045545146 1.0 11.648760046888725 -6.236837311806722 6.423447354874696 1.1850880152793493 1.0149748752918122 0.36246042534509537 0.11282167188575398 0.22634575525672762 35.89366201576337 0.02019476877136917 0.052690456841487036 5.796457930516599e-07 6.236837311806722 -0.17011313998753708 TVPS(ph)DVDS ddPTM_A549_MK2206_60min_R1 1 TVPSDVDS 8 0 Q9H6H4 Q9H6H4 REEP4 Receptor expression-enhancing protein 4 1 T(0.005)VPS(0.995)DVDS 72.485 0.005633399999999999 2504700.0 228.37 146.58 221.51 154.95 295.19 263.27 222.64 178.54 244.93 268.34 254.39 True False 266.91327288955637 154.04029590619953 252.92344882090717 192.91275695596983 251.76794203582847 291.1290566555177 263.0908061011605 203.84859175581832 189.45374607283858 207.72180762977612 191.2179421931727 1.395858933676394 0.805574488143924 1.3226972632379768 1.0088632622198443 1.3166543847725691 1.5224986385504164 1.3758688284354625 1.0660536841772195 0.9907738986200789 1.0863091886007792 1.0 7.579074089132405 -8.45941333669717 5.94755910229381 0.9970490231987352 1.2390203622330234 0.22863621417628943 0.18725498731558896 0.22575204716900915 15.925067774814071 0.030318063476773766 0.03650147098499615 3.47205553714788e-09 8.45941333669717 0.24197133903428814 TVPS(ph)DVDS ddPTM_A549_PD325901_60min_R1 3 TVPSDVDS 8 0 Q9H6H4 Q9H6H4 REEP4 Receptor expression-enhancing protein 4 1 T(0.003)VPS(0.997)DVDS;T(0.005)VPS(0.994)DVDS(0.001);T(0.002)VPS(0.997)DVDS(0.001) 83.265 0.0033824 48165700.0 2063.26 2033.4199999999998 2150.7200000000003 2306.74 2390.11 2263.8900000000003 2276.56 2304.95 2210.6 2385.2 2198.5600000000004 True False 2272.720636308268 2204.7834396881103 2296.680792529994 2449.222090813356 2222.236919031874 2245.4536304303365 2363.1957365814324 2258.9759640517036 2117.696169568577 2234.5980649392204 1928.1510578201262 1.1787046596223094 1.1434702850412204 1.1911311529328565 1.2702438851353934 1.152522210341874 1.1645631297005004 1.2256279024389025 1.1715762387442776 1.0983040778779756 1.1589330907846755 1.0 10.913002366225326 -9.318834600706769 0.743509074202556 1.0146726625980151 1.192416355720404 0.2714496770304873 0.0561890495152297 0.18329905580840156 0.22028696702283337 0.01264593642769112 0.009094690031595935 4.79916187971795e-10 9.318834600706769 0.1777436931223888 TVPST(ph)PTLVVPHR ddPTM_A549_MK2206_60min_R1 2 TVPSTPTLVVPHR 13 0 P12270 P12270 TPR Nucleoprotein TPR 1 T(0.008)VPS(0.133)T(0.842)PT(0.017)LVVPHR;T(0.002)VPS(0.091)T(0.905)PT(0.002)LVVPHR 84.759 0.00031353 191976000.0 1306.56 1194.4 1243.03 1033.54 1536.4699999999998 1194.02 1115.56 1054.46 1620.46 1557.8400000000001 1706.82 True False 1527.0753856749093 1255.1898583051218 1419.310345302028 1286.7573463973736 1310.4572983495011 1320.3704038736705 1318.2428119574693 1203.9329341483149 1253.428397342881 1205.9228620331307 1282.9694881644355 1.1902663311656148 0.978347396321125 1.106269758084939 1.0029524148998723 1.0214251472374396 1.0291518356860887 1.0274935016915328 0.938395608979603 0.9769744400828898 0.9399466418788053 1.0 10.325271145037235 -2.0000000000000004 0.5169277900220098 0.9904993437452569 6.703862468105026 0.5523071180836914 0.04684237599670306 54.166849849352424 0.4925380489477351 0.007414963301780757 340.8793261929935 0.00999999999999999 2.0000000000000004 5.713363124359769 TVPST(ph)PTLVVPHR ddPTM_A549_PD325901_60min_R1 2 TVPSTPTLVVPHR 13 0 P12270 P12270 TPR Nucleoprotein TPR 1 T(0.006)VPS(0.137)T(0.852)PT(0.005)LVVPHR;T(0.014)VPS(0.16)T(0.806)PT(0.02)LVVPHR 90.70700000000001 0.00016385 153114000.0 1509.33 1616.61 1690.82 1518.3600000000001 2057.7 1453.29 1492.51 2127.16 1674.53 1812.66 2288.0 True False 1662.5560704899808 1752.8473981932889 1805.569212926632 1612.1456487542446 1913.1742506796274 1441.4548880767643 1549.3082847828102 2084.7321250752616 1604.1553274349349 1698.2083382495084 2006.590504826998 0.8285477612350812 0.8735451473415667 0.899819474169346 0.8034253351025593 0.9534452824716099 0.7183602656392725 0.7721098455593394 1.0389424848070836 0.7994432962659913 0.8463153464368269 1.0 10.970530513254664 -10.95063921728445 1.0228417628127946 1.0066148700397612 0.8513268307567684 0.0 0.09531548699455221 0.5911426604709678 1.0172522043605972 0.07110675118633936 0.01387980012504751 1.1203682237280315e-11 10.95063921728445 -0.15528803928299284 TVQPVAMGPDGLPVDASSVS(ph)NNYIQTLGRDFRK ddPTM_A549_PD325901_60min_R1 1 TVQPVAMGPDGLPVDASSVSNNYIQTLGRDFRK 33 2 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 TVQPVAMGPDGLPVDAS(0.14)S(0.14)VS(0.358)NNY(0.004)IQT(0.358)LGRDFRK 60.312 0.00052374 2993900.0 750.33 951.82 639.68 973.25 673.63 937.84 1071.5 1123.9 1059.7 689.91 746.63 True False 826.5029492362484 1032.0332118125805 683.0925315083258 1033.365442088878 626.3165526973409 930.2025419798614 1112.2765188472983 1101.4829328175063 1015.1644942060165 646.3489648592232 654.7992432775268 1.2622234337035536 1.5761062988510033 1.04320910343326 1.5781408617952564 0.9565016440189837 1.4205919623911494 1.6986527248869723 1.6821689153215154 1.55034463559353 0.9870948561638425 1.0 9.354908844329017 -10.83822855370065 1.1358334625844888 1.0047324767874393 1.426981683736553 0.3277358618969667 0.23325231981656755 0.47437072258702195 1.1054406301499777 0.15339606632184216 0.039441472333351886 1.4513476240687074e-11 10.83822855370065 0.4222492069491137 TVQPVAMGPDGLPVDASSVSNNYIQT(ph)LGR ddPTM_A549_MK2206_60min_R1 3 TVQPVAMGPDGLPVDASSVSNNYIQTLGR 29 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;E9PKL1;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 TVQPVAMGPDGLPVDASSVS(0.001)NNYIQT(0.999)LGR;TVQPVAMGPDGLPVDASSVSNNYIQT(0.999)LGR;TVQPVAMGPDGLPVDASSVSNNYIQT(1)LGR 120.34 3.3608e-21 19555900.0 1997.06 2340.16 2243.2200000000003 1994.8300000000002 3218.01 2406.48 2203.36 2885.98 4238.0 3623.8 3668.59 True False 2334.1149045707307 2459.264148368481 2561.3423270463436 2483.563439551322 2744.644991872071 2661.132116307859 2603.6819912461983 3295.0765029430772 3278.099766695341 2805.181063161596 2757.5778550668333 0.8464366292621539 0.8918203864488452 0.9288377197909672 0.9006322106148222 0.9953100641670011 0.9650251982616691 0.9441916522727134 1.1949169438275813 1.1887605496512417 1.017262688706067 1.0 11.429185902857068 -8.145832714120765 6.627633737259901 1.0993984009106317 0.9254727130178472 0.6198700303365368 0.06625870132935845 0.15693355813259474 8.120906242880483 0.013395721798011188 0.017337558114663126 7.147715959073883e-09 8.145832714120765 -0.1739256878927845 TVQPVAMGPDGLPVDASSVSNNYIQT(ph)LGR ddPTM_A549_PD325901_60min_R1 3 TVQPVAMGPDGLPVDASSVSNNYIQTLGR 29 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;E9PKL1;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 TVQPVAMGPDGLPVDASSVSNNYIQT(1)LGR;TVQPVAMGPDGLPVDASSVS(0.001)NNYIQT(0.999)LGR;TVQPVAMGPDGLPVDASSVSNNYIQT(1)LGR 123.73 3.6918000000000004e-21 61046000.0 4749.8 4412.0 4978.8 5021.2 4924.1 5819.0 4991.0 5665.0 4815.8 5455.9 5631.4 True False 5231.996199382052 4783.814723915346 5316.691307956567 5331.348120027406 4578.248203222799 5771.611993283299 5180.9352361799965 5552.007130893475 4613.408673395616 5111.413542890281 4938.773500385822 1.059371562387569 0.9686240366239977 1.076520578953706 1.079488281779052 0.9270010464875826 1.1686326560293592 1.0490327681103935 1.1241671905908919 0.9341203181387466 1.0349560558893764 1.0 12.269937090721408 -8.776640139832457 24.999597362946087 0.9688901493725294 1.0542604654810193 0.14616683458366864 0.06689435511608895 226.45969502202877 372440.85636989144 0.01088108760499927 0.011605240948597313 1.6724758682984006e-09 8.776640139832457 0.08537031610848989 TVQPVAMGPDGLPVDASSVSNNYIQT(ph)LGRDFRK ddPTM_A549_PD325901_60min_R1 1 TVQPVAMGPDGLPVDASSVSNNYIQTLGRDFRK 33 2 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 TVQPVAMGPDGLPVDAS(0.034)S(0.139)VS(0.139)NNY(0.002)IQT(0.685)LGRDFRK 61.608000000000004 0.00061742 2434300.0 700.66 945.45 736.37 732.81 1229.1 1011.5 978.87 1096.2 917.29 876.03 952.28 True False 771.7904874013697 1025.126389557064 786.3444963525295 778.0740093677383 1142.7722561648102 1003.2626793617567 1016.1214335082173 1074.3354310477364 878.7394912619009 820.7173162957846 835.1555970002862 0.9241277795101757 1.2274675440589937 0.9415544829932572 0.9316515535098207 1.3683345478009394 1.2012883383231554 1.2166851747841056 1.2863895481351462 1.0521865559162382 0.9827118673976909 1.0 9.705901199466997 -4.027952741762557 12.711166323824497 1.0794886191678768 1.0866211943968835 0.0 0.1546973558240788 0.0 0.0 0.020483358678609166 0.0 9.376640343302361e-05 4.027952741762557 0.007132575229006788 TVQS(ph)LEIDLDSMR ddPTM_A549_MK2206_60min_R1 3 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 1 T(0.016)VQS(0.982)LEIDLDS(0.002)MR;T(0.12)VQS(0.875)LEIDLDS(0.005)MR;T(0.022)VQS(0.978)LEIDLDSMR 119.58 7.9396e-15 8221200.0 1205.29 1456.29 1074.98 1330.35 1903.17 1213.04 1618.23 1812.69 2197.0 2121.4 2222.0 True False 1408.7134854886963 1530.4089406824883 1227.4283283531158 1656.2858097216808 1623.2162141140545 1341.4030876492159 1912.2414442915979 2069.6443586303035 1699.3830078880749 1642.1742666237121 1670.2160759197675 0.8434318803409523 0.9162939830043911 0.7348919376657216 0.9916596023718576 0.9718600111187227 0.8031314672327781 1.1449066212816505 1.239147669854977 1.017462969246207 0.9832106697448634 1.0 10.705819040949837 -7.755285610434452 24.99952190043815 1.038764636779134 0.8817505566157098 0.48721562859983525 0.09866008789998758 127.46311056180937 517813.410462069 0.015859093790775446 0.02318966084388202 1.7567679090412935e-08 7.755285610434452 -0.15701408016342433 TVQS(ph)LEIDLDSMR ddPTM_A549_PD325901_60min_R1 4 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 1 T(0.01)VQS(0.982)LEIDLDS(0.008)MR;T(0.008)VQS(0.982)LEIDLDS(0.01)MR;T(0.003)VQS(0.997)LEIDLDSMR;TVQS(1)LEIDLDSMR 199.04 1.8531999999999998e-30 61512400.0 14904.8 15514.3 12843.100000000002 13413.099999999999 15334.5 13740.4 12672.6 14569.4 12364.6 15589.5 23532.5 True False 16417.924323666157 16821.74450844059 13714.7099978342 14241.596723639695 14257.457621153104 13628.502738015093 13154.86272771281 14278.801887526808 11844.958861054742 14605.17630947929 20638.151684808287 0.7955133082848387 0.8150799919172536 0.6645318925497372 0.6900616363878609 0.6908301595461186 0.6603548101667949 0.637405080097172 0.6918643735929809 0.5739350617223052 0.7076785039926874 1.0 14.333026150961613 -10.90105409555546 1.1283636232403982 1.0016603664264325 0.6822882448762019 0.062245264890584795 0.10552423351772365 0.20960422240289658 0.46990965252630534 0.05273302202765721 0.012309588254250305 1.2558735228236996e-11 10.90105409555546 -0.31937212155023065 TVQS(ph)PK ddPTM_A549_MK2206_60min_R1 2 TVQSPK 6 0 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 T(0.09)VQS(0.91)PK;T(0.002)VQS(0.998)PK 74.301 0.046462 21297200.0 5992.4 5048.8 4946.799999999999 4188.4 7538.4 6670.799999999999 6411.4 6996.1 7185.1 7086.8 7006.5 True False 7003.770619886057 5305.76235483163 5648.330624474126 5214.558188024421 6429.511346058092 7376.699628281339 7576.2683894941665 7987.818599657674 5557.686322246976 5485.886958003645 5266.5926804373785 1.3298485462719343 1.0074373844287874 1.072482906349432 0.9901198942902423 1.220810443522687 1.4006588464078298 1.438552181496021 1.5166957242256873 1.055271721105537 1.0416387389100414 1.0 12.362654170082095 -8.96904751278327 24.978270900477884 1.024384380844502 1.2384952577267077 0.25412739063907697 0.16401328978436183 198.85849362290043 160477.5235397247 0.031524234899960334 0.03324440025347612 1.0738719219352877e-09 8.96904751278327 0.21411087688220576 TVQSLEIDLDSMR ddPTM_A549_MK2206_60min_R1 6 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;;;; 150.49 4.5398e-13 35538100.0 9283.91 9645.23 9319.74 8547.29 12764.810000000001 10468.02 9267.48 8578.24 13825.2 13221.5 14933.05 False True 10850.80703819277 10136.131008891743 10641.419271880106 10641.37643370243 10887.123358441555 11575.738928290695 10951.261155795833 9794.231789758207 10693.814274307786 10234.753967269457 11224.761553786531 0.9666848588451652 0.9030152632037379 0.948030764029046 0.9480269476292524 0.9699202344987828 1.0312681363272047 0.9756341908306786 0.8725558884103196 0.9526985694141862 0.9118014594988784 1.0 13.454397177850081 -8.020793770776546 0.006388668244397095 1.9190293741754105 1.984659466176202e-05 0.0 0.04557627367267598 4690.767502490866 17.552335655015295 2612.582229872279 2658.617839874299 9.532487165710437e-09 8.020793770776546 -1.9190095275807488 TVQSLEIDLDSMR ddPTM_A549_PD325901_60min_R1 4 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 208.82 7.4506e-37 83784100.0 10545.15 9381.5 10766.9 9696.1 10943.800000000001 11660.0 10931.3 11200.4 11481.7 11496.5 11811.0 False True 11615.685865070862 10172.111929377119 11497.606580629377 10295.006075559184 10175.14524206041 11565.044825860678 11347.296603336878 10976.999235456176 10999.16407768729 10770.609027995039 10358.321876097756 1.1213868427736855 0.9820231550102412 1.1099873819484762 0.9938874461234232 0.9823159932440375 1.1164979196627867 1.0954763463685386 1.0597275665652024 1.0618673767097644 1.0398025043852568 1.0 13.338502674356471 -10.652079715080635 0.9274410958042045 1.0000899360117799 1.0561130259703178 0.05742231190470759 0.051004525588591 0.8695696842224548 1.3350465107715608 0.03212481330413218 0.008645399895575386 2.2280261558498357e-11 10.652079715080635 0.056023089958537886 TVQSQIGPPLTDSRPLGS(ph)PPNATR ddPTM_A549_MK2206_60min_R1 1 TVQSQIGPPLTDSRPLGSPPNATR 24 1 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-4;Q96QT6-2;K7EPF7 Q96QT6 PHF12 PHD finger protein 12 1 TVQSQIGPPLT(0.014)DS(0.051)RPLGS(0.852)PPNAT(0.082)R 53.073 0.0045334 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TVQSQIGPPLTDSRPLGS(ph)PPNATR ddPTM_A549_PD325901_60min_R1 2 TVQSQIGPPLTDSRPLGSPPNATR 24 1 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-4;Q96QT6-2;K7EPF7 Q96QT6 PHF12 PHD finger protein 12 1 TVQSQIGPPLT(0.001)DS(0.005)RPLGS(0.863)PPNAT(0.13)R;TVQSQIGPPLTDS(0.004)RPLGS(0.915)PPNAT(0.081)R 111.89 5.1223e-12 23120800.0 4519.3 5581.299999999999 5651.200000000001 5060.0 6460.200000000001 6567.9 5925.3 6570.1 6320.5 6170.7 7106.7 True False 4978.096009067179 6051.6557385740525 6034.7244154262335 5372.544707906214 6006.457838480119 6514.413199980306 6150.790533948569 6439.054201356261 6054.871365130818 5781.080948901747 6232.6209530830565 0.7987163099666267 0.9709648291029976 0.9682482635882211 0.8620040827685193 0.9637130003083113 1.0452124794718756 0.9868706247739951 1.0331214187140787 0.9714807639851237 0.9275521473902647 1.0 12.60562326024808 -6.977964027167355 11.123281849955319 0.9942243575075381 0.910251500065157 0.4023674286243608 0.053069754452750736 0.39614556045313226 196.033668210063 0.006703249570988669 0.012630713691374263 1.0520490119686394e-07 6.977964027167355 -0.08397285744238114 TVQSQIGPPLTDSRPLGSPPNAT(ph)R ddPTM_A549_MK2206_60min_R1 1 TVQSQIGPPLTDSRPLGSPPNATR 24 1 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-4;Q96QT6-2;K7EPF7 Q96QT6 PHF12 PHD finger protein 12 1 TVQSQIGPPLT(0.005)DS(0.238)RPLGS(0.313)PPNAT(0.444)R 61.111999999999995 0.00017067 3322800.0 1428.2 1862.3 1899.4 1829.7 2103.2 1532.7 1694.0 2029.9 3219.3 2519.4 2453.2 True False 1669.2452438624357 1957.0831154735658 2168.7634810637496 2277.9765821383535 1793.8220660921918 1694.8892966760823 2001.7778725088313 2317.6445413080305 2490.1336901657173 1950.2657902007086 1844.00273512438 0.905229266782971 1.0613233257170622 1.1761172799548283 1.2353433857486666 0.9727870962030848 0.9191359993084609 1.085561227420744 1.2568552622844689 1.3503958767163948 1.0576263001416648 1.0 10.848625080314074 -8.019014466974541 23.154758906764663 1.1766692564459404 1.0525032393262752 0.16363116848353598 0.12671149658082978 492.14623559161083 599308.5391077193 0.02551911526403225 0.03325853337320709 9.571621863131179e-09 8.019014466974541 -0.12416601711966524 TVRGS(ph)LER ddPTM_A549_MK2206_60min_R1 2 TVRGSLER 8 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 TVRGS(1)LER;T(0.051)VRGS(0.949)LER 67.08 0.0022802 64371000.0 3742.8999999999996 3678.55 3170.11 3012.58 4243.1 3542.0 3133.7 3399.27 5085.8 5265.5 5364.299999999999 True False 4374.610014880767 3865.772482642587 3619.679266586819 3750.662235239853 3618.945610800584 3916.812089010687 3703.05272673018 3881.126932327772 3933.8744203537453 4076.0198929514268 4032.1962628516667 1.084919912054811 0.9587262699134141 0.8976942169047333 0.9301784910110735 0.8975122674810422 0.9713842862997504 0.918371151931799 0.962534231799259 0.9756158093285902 1.010868426843084 1.0 11.977350146851045 -9.046345039524292 1.2108842541035054 0.992779510458076 0.9473265570321977 0.13355474696456726 0.04891417827049218 0.6008737170801012 1.804151324196329 0.010749551224360426 0.010105557885260437 8.987832299219164e-10 9.046345039524292 -0.045452953425878295 TVRGS(ph)LER ddPTM_A549_PD325901_60min_R1 2 TVRGSLER 8 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 T(0.001)VRGS(0.999)LER;T(0.016)VRGS(0.984)LER 61.435 0.0030210999999999997 70372000.0 5219.700000000001 5199.200000000001 5463.4 5050.6 5544.1 5673.5 5870.2 5890.5 5727.5 5345.0 5584.1 True False 5749.600101459954 5637.354830593985 5834.17917809309 5362.564091255167 5154.701542106686 5627.296897042932 6093.593673296695 5773.009356492145 5486.793092917766 5007.515787816595 4897.291100526418 1.174036826367524 1.151116957288493 1.191307410226434 1.0950061944814218 1.0525618012685827 1.149063182386288 1.244278428260408 1.1788168679357443 1.1203730757046446 1.0225072769879513 1.0 12.25776823868383 -10.102017640486327 0.7751177508273719 1.006173907552786 1.1515398894036941 0.5499718920246821 0.04849440867328414 0.3568197720577095 0.4239081362898969 0.026663532136600734 0.010849304083668916 7.906465122976061e-11 10.102017640486327 0.1453659818509081 TVS(ph)ASESEDR ddPTM_A549_MK2206_60min_R1 2 TVSASESEDR 10 0 H3BNE2;Q9ULG6-3;Q9ULG6-4;Q9ULG6-2;Q9ULG6;Q9ULG6-5 H3BNE2 CCPG1 Cell cycle progression protein 1 1 T(0.005)VS(0.964)AS(0.03)ES(0.001)EDR;T(0.001)VS(0.986)AS(0.013)ESEDR 100.72 0.00044396 7491100.0 782.65 952.52 1117.04 880.37 1145.1 998.56 1310.44 956.73 1374.04 1587.81 1573.42 True False 914.7421860446266 1000.999199458133 1275.453068804596 1096.0606895213105 976.6573069047971 1104.2269564095175 1548.5299853898898 1092.3494073627426 1062.8221338910016 1229.1226182180617 1182.6963898171382 0.7734378779883304 0.8463703855669179 1.078428140802729 0.9267473029919175 0.825788693796387 0.9336520901871077 1.3093216473158549 0.9236093191521751 0.8986432553965343 1.0392545616953321 1.0 10.207864051389608 -7.52719567764886 24.998453464385392 0.9791511666178797 0.8981651645135128 0.17147669304075897 0.127712634375915 264.36032409588626 1530852.3239200367 0.020145741037548848 0.029948628958615567 2.9703274062957536e-08 7.52719567764886 -0.0809860021043669 TVS(ph)ASESEDR ddPTM_A549_PD325901_60min_R1 2 TVSASESEDR 10 0 H3BNE2;Q9ULG6-3;Q9ULG6-4;Q9ULG6-2;Q9ULG6;Q9ULG6-5 H3BNE2 CCPG1 Cell cycle progression protein 1 1 TVS(0.993)AS(0.007)ESEDR;TVS(0.999)AS(0.001)ESEDR 105.46 0.00031863 12182000.0 1431.21 1584.29 1457.52 1695.94 1581.88 1505.1 1486.76 1385.6 1566.6599999999999 1608.58 1533.54 True False 1576.5053855988845 1717.8036783662376 1556.436071979764 1800.6943620408044 1470.7742059897412 1492.8429646143147 1543.33946538629 1357.9631210178281 1500.818728406905 1507.013984278019 1344.924301911012 1.172188935361505 1.2772493410412755 1.1572666727549004 1.3388815708677326 1.0935739683638017 1.1099828908535032 1.1475288707277789 1.009694834934791 1.1159131605209167 1.1205195579682015 1.0 10.393309258684944 -7.226491397278311 0.1939745523431724 0.9782282859672387 1.3371865522304816 0.3846944909351726 0.07493180008385109 3.1196512686128393 0.2512767164079349 0.11490166393499923 0.3182674763315494 5.936201067980357e-08 7.226491397278311 0.3589582662632429 TVS(ph)ASESEDRLVAEQETEPSK ddPTM_A549_MK2206_60min_R1 1 TVSASESEDRLVAEQETEPSK 21 1 H3BNE2;Q9ULG6-3;Q9ULG6-4;Q9ULG6-2;Q9ULG6;Q9ULG6-5 H3BNE2 CCPG1 Cell cycle progression protein 1 1 T(0.004)VS(0.992)AS(0.004)ESEDRLVAEQETEPSK 173.35 9.867e-36 8848900.0 2880.0 2647.7 2157.8 2554.3 3773.0 2715.9 2587.7 1952.0 4855.2 5423.2 3714.5 True False 3366.0735907602675 2782.4566207589314 2463.80848659543 3180.103614666883 3217.996698062877 3003.2947353314867 3057.851594268657 2228.701977749286 3755.504952161211 4198.095353424022 2792.0871350152916 1.205576125668382 0.9965507830555913 0.8824253568941488 1.1389700467386976 1.1525416444588334 1.0756450605238859 1.0951848729649012 0.798220782510457 1.345052919396315 1.5035688896582484 1.0 11.447128250311684 -8.783426462140321 24.999433365867798 1.1629415924567792 1.0458885839565915 0.2068677231974283 0.16924703238153532 419.2277947630799 476662.1813914564 0.027960322357723603 0.02977767383860581 1.6465447475029777e-09 8.783426462140321 -0.11705300850018774 TVS(ph)ASESEDRLVAEQETEPSKELSK ddPTM_A549_PD325901_60min_R1 2 TVSASESEDRLVAEQETEPSKELSK 25 2 H3BNE2;Q9ULG6-3;Q9ULG6-4;Q9ULG6-2;Q9ULG6;Q9ULG6-5 H3BNE2 CCPG1 Cell cycle progression protein 1 1 T(0.031)VS(0.933)AS(0.035)ESEDRLVAEQETEPSKELSK;T(0.297)VS(0.666)AS(0.032)ES(0.005)EDRLVAEQETEPSKELSK 117.88 1.439e-17 31052000.0 3608.0 4305.299999999999 4180.8 3623.7 4278.299999999999 4701.9 3581.0 4234.5 4150.7 4511.2 4205.1 True False 3974.2815039307807 4668.122740451665 4464.534229192739 3847.5277189801877 3977.8069673337463 4663.609285309979 3717.2769145983902 4150.039575599011 3976.260513448062 4226.362062113794 3687.89935832518 1.0776545447096089 1.265794504373797 1.2105900393171953 1.0432843592368262 1.0786104990512064 1.2645706490829802 1.0079659322066077 1.1253125891927016 1.078191167140157 1.1460079713328055 1.0 11.848583570248666 -9.178304979200782 0.1645473178457317 0.9247572083078216 1.2252365035079558 0.008372555290798167 0.08962996723739441 3.6130090565126878 0.40971688469506057 0.38643505527277405 0.26964242937366645 6.632771267169546e-10 9.178304979200782 0.30047929520013417 TVS(ph)ASS(ph)TGDLPK ddPTM_A549_MK2206_60min_R1 1 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 2 T(0.011)VS(0.974)AS(0.105)S(0.727)T(0.183)GDLPK 69.314 0.00055688 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TVS(ph)DLALQNAFGDR ddPTM_A549_MK2206_60min_R1 2 TVSDLALQNAFGDR 14 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 T(0.082)VS(0.918)DLALQNAFGDR;TVS(1)DLALQNAFGDR 189.1 6.6869e-35 4279700.0 1410.8 1921.5 1909.9 1793.6 2583.6 1802.2 1523.3 1752.9 2795.4 2358.3 2634.2 True False 1648.9085492515921 2019.2961426099214 2180.752538951067 2233.0320805177635 2203.5558624742253 1992.9076077964587 1800.0638920854208 2001.378943031108 2162.246363336517 1825.5583920895178 1980.0554397785102 0.8327587784289715 1.0198179818822652 1.1013593332492786 1.1277624028383526 1.1128758408505552 1.006490812206443 0.9090977231863653 1.010769144552328 1.0920130416037173 0.9219733727726965 1.0 10.95132510970121 -5.272448226270071 4.231690782851651 1.0442372885439193 0.8182193574904097 0.3820839726767723 0.07071563858618948 0.1415338738553993 5.72441397119477 0.009184406626386745 0.09461062652688793 5.340129312868663e-06 5.272448226270071 -0.22601793105350954 TVS(ph)DLALQNAFGDR ddPTM_A549_PD325901_60min_R1 1 TVSDLALQNAFGDR 14 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 TVS(1)DLALQNAFGDR 173.03 1.147e-22 6205200.0 2194.7 1937.8 2029.4 2177.5 2543.1 2594.1 2329.8 2164.7 2205.7 2142.1 2753.1 True False 2417.5043283472537 2101.105206709691 2167.12728777357 2311.9992295386915 2364.4814292187216 2572.9745096711126 2418.461813915478 2121.5233603257007 2113.002099528367 2006.8474404269277 2414.486153338817 1.0012500278803682 0.8702080166433035 0.897552170583711 0.9575533188879944 0.9792897035044299 1.0656406151317677 1.0016465866127098 0.878664537956451 0.8751353146533686 0.8311695793541017 1.0 11.237500474589428 -6.27863758044821 23.262699503590127 0.952251097758675 0.9177238646098058 0.022546445224416845 0.07006496238264856 889.7083368909971 1203441.5626566627 0.00999733195989466 0.023299756807778908 5.264564119849352e-07 6.27863758044821 -0.034527233148869185 TVS(ph)DNS(ph)LSNSR ddPTM_A549_PD325901_60min_R1 1 TVSDNSLSNSR 11 0 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 2 T(0.041)VS(0.959)DNS(0.989)LS(0.011)NSR 107.39 0.0001608 23669000.0 1205.9 1264.7 1439.9 1468.2 1337.9 1285.7 1496.4 1133.1 1682.9 1641.8 1363.7 True False 1328.3220802633393 1371.2807074650366 1537.6202728220967 1558.8873794758701 1243.9305195044349 1275.2296854724766 1553.3463208614987 1110.4994316002465 1612.1735654423937 1538.1364678086582 1195.973545206546 1.1106617580190175 1.1465811371506673 1.2856641177264065 1.3034463728097334 1.040098691555595 1.0662691416407901 1.29881327817601 0.9285317689936543 1.3480010255276753 1.2860957284327055 1.0 10.223969762307272 -11.176375130951763 1.5887242013388032 1.0001183892547567 1.1934200146538103 0.0 0.1511429770753218 0.4729160042774935 2.1461158532324736 0.09446591877431532 0.019978637983868026 6.662310495862163e-12 11.176375130951763 0.1933016253990536 TVS(ph)DNS(ph)LSNSRGEGKPDLK ddPTM_A549_MK2206_60min_R1 1 TVSDNSLSNSRGEGKPDLK 19 2 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 2 T(0.243)VS(0.828)DNS(0.849)LS(0.067)NS(0.012)RGEGKPDLK 55.128 0.0078643 4633300.0 1962.3 2062.8 1832.3 1819.1 2643.7 1776.9 2009.7 1485.8 3418.8 3159.9 2941.7 True False 2293.4882663711387 2167.7877090688235 2092.14769208861 2264.779581662501 2254.815232088213 1964.9303785892405 2374.836476021841 1696.4167000716634 2644.447258701754 2446.0763953541395 2211.194703210252 1.037216787396158 0.9803694382595936 0.9461616785944685 1.0242334509821562 1.0197271315884722 0.8886283852509774 1.0740060441416628 0.7671946290431934 1.195935959353782 1.1062238851254853 1.0 11.110610349612033 -8.803143808649049 24.999999539114615 1.0925252507768028 0.9715237307219318 0.30292781609490826 0.08980091064651546 150.66168297458188 90314.50832843443 0.01695978191310333 0.018055143504708982 1.5734617552034557e-09 8.803143808649049 -0.12100152005487108 TVS(ph)DNS(ph)LSNSRGEGKPDLK ddPTM_A549_PD325901_60min_R1 4 TVSDNSLSNSRGEGKPDLK 19 2 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 2 T(0.384)VS(0.608)DNS(0.904)LS(0.078)NS(0.026)RGEGKPDLK;T(0.504)VS(0.578)DNS(0.901)LS(0.014)NS(0.002)RGEGKPDLK;T(0.489)VS(0.524)DNS(0.951)LS(0.017)NS(0.019)RGEGKPDLK;T(0.115)VS(0.877)DNS(0.851)LS(0.15)NS(0.007)RGEGKPDLK 75.184 0.00038308 68572000.0 18154.899999999998 17714.6 19090.9 18000.9 22124.8 20139.399999999998 18121.0 20311.3 20982.3 21831.699999999997 24112.9 True False 19997.97208306899 19207.471511394095 20386.52327690769 19112.774709989917 20570.830374416397 19975.391403596783 18810.604571191674 19906.1751875934 20100.486898913743 20453.242736178778 21147.166164267022 0.9456573012066336 0.9082763790757702 0.964030977888441 0.9037983889437311 0.9727464292201724 0.9445895137169622 0.8895094702086607 0.9413164408396921 0.9505049869461052 0.9671859849826694 1.0 14.36817672683426 -10.009405666995097 0.6545671567985863 0.9990908648458503 0.9331397215018491 0.3274581549086508 0.02571342804719744 0.42343787519431414 0.36050138281472827 0.013462057738448573 0.005207169525735879 9.785754878591245e-11 10.009405666995097 -0.0659511433440012 TVS(ph)DNSLS(ph)NSR ddPTM_A549_MK2206_60min_R1 1 TVSDNSLSNSR 11 0 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 2 T(0.082)VS(0.871)DNS(0.111)LS(0.934)NS(0.002)R 75.102 0.0015542 8802100.0 1154.0 1417.4 956.65 959.02 1378.8 1122.6 865.56 1060.5 1682.9 1778.5 1735.4 True False 1348.766987408802 1489.539605795109 1092.3173550382412 1193.9799430520432 1175.9803464853157 1241.39278687843 1022.8210480098837 1210.82912264504 1301.7258370390718 1376.735614778105 1304.4522853965634 1.0339718842217112 1.141888915731615 0.837376243858677 0.915311319868679 0.9015127342337468 0.9516582559407584 0.7841000084559921 0.9282279897857196 0.9979098903133412 1.0554127814338314 1.0 10.34922845849877 -8.765295645138801 23.057508179202532 0.9990130147642253 0.9337996515066401 0.12791810166448525 0.09043352022412321 67.54323924067617 403855.58302615327 0.015710116396845573 0.017049186683850363 1.7167393222697243e-09 8.765295645138801 -0.0652133632575852 TVS(ph)DNSLSNSRGEGKPDLK ddPTM_A549_MK2206_60min_R1 1 TVSDNSLSNSRGEGKPDLK 19 2 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 1 T(0.043)VS(0.954)DNS(0.003)LS(0.001)NSRGEGKPDLK 69.72 0.00024666 6611900.0 1306.7 1742.4 1242.0 1342.8 1815.1 1318.6 1462.5 1206.4 2285.2 2349.6 2974.7 True False 1527.2390142522386 1831.0807176078733 1418.134275814035 1671.7860602805822 1548.10119444843 1458.1333767841593 1728.2173190933695 1377.4108944450502 1767.605848714534 1818.8237281319305 2235.9998924565843 0.6830228478116497 0.818909125973237 0.6342282397232138 0.7476682203431916 0.6923529825162946 0.6521169261695174 0.7729058149437839 0.6160156353727531 0.7905214372674014 0.8134274667310817 1.0 11.126704403454838 -9.931174189592184 0.6831615848364239 0.9915538337640494 0.7037456632883894 0.4267609668329274 0.07977242310785221 0.22428861334076078 0.2131046031050997 0.030689710798149656 0.013162778515597195 1.171725308250812e-10 9.931174189592184 -0.28780817047566 TVS(ph)DNSLSNSRGEGKPDLK ddPTM_A549_PD325901_60min_R1 1 TVSDNSLSNSRGEGKPDLK 19 2 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 1 T(0.17)VS(0.815)DNS(0.007)LS(0.008)NS(0.001)RGEGKPDLK 58.457 0.0010213 5172100.0 1635.6 1582.3 1927.7 2079.5 2101.8 2451.7 2425.8 2607.4 2319.6 2359.7 3005.4 True False 1801.6449079349186 1715.6459740823332 2058.525314201788 2207.94599211284 1954.1768188163692 2431.734168058544 2518.115146448694 2555.393361534269 2222.1152786262865 2210.7081392910786 2635.754852800289 0.6835403930000576 0.6509125733979356 0.7810002937165275 0.8376901932920907 0.7414106880008985 0.9225949695113002 0.9553677360295432 0.9695110145844398 0.843065991613544 0.8387381462818401 1.0 11.36400047856797 -3.631556175181556 0.23737708833169743 0.9631456406959122 6.953767104299675e-17 0.6396791181925043 0.0667281206258328 9.456452393954157 0.22044240464794454 0.03861858213851385 3.081028752026407 0.00023358439456181278 3.631556175181556 -0.9631456406959121 TVS(ph)DSIKK ddPTM_A549_MK2206_60min_R1 4 TVSDSIKK 8 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 T(0.002)VS(0.995)DS(0.003)IKK;T(0.001)VS(0.999)DS(0.001)IKK;T(0.01)VS(0.978)DS(0.012)IKK;T(0.007)VS(0.993)DSIKK 85.958 0.0012050000000000001 195262400.0 14918.9 17061.9 17527.2 14796.600000000002 22395.8 17042.0 16802.300000000003 16666.699999999997 25721.1 21986.1 22541.199999999997 True False 17436.845587914377 17930.277832732878 20012.820514531202 18421.767664244613 19101.407487536857 18845.373128435946 19855.060417505985 19029.255764628073 19895.311918156553 17019.424739990387 16943.597934528658 1.0291111519106901 1.0582331982862687 1.1811434969043915 1.0872406047067285 1.12735249982596 1.1122415204406932 1.1718325997953587 1.1230941526208633 1.174208216875397 1.0044752481589052 1.0 14.048452639765244 -10.943975778443164 1.2047966981124063 1.0000174302849705 1.1241887767633256 0.4842945133257951 0.045753639324515906 0.3254192705295232 0.8397127504697794 0.0332677610244247 0.007784652139881444 1.137690735564398e-11 10.943975778443164 0.12417134647835515 TVS(ph)DSIKK ddPTM_A549_PD325901_60min_R1 4 TVSDSIKK 8 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 T(0.034)VS(0.964)DS(0.002)IKK;T(0.002)VS(0.923)DS(0.074)IKK;T(0.022)VS(0.976)DS(0.002)IKK;TVS(0.911)DS(0.089)IKK 121.9 0.00048971 279859200.0 34356.9 34673.0 36640.2 35810.0 42339.6 37330.4 37577.2 38885.5 35228.4 38110.7 39155.3 True False 37844.787195786994 37595.01539490407 39126.8243074215 38021.90236958923 39365.812559690494 37026.393599254676 39007.22090903285 38109.89819741539 33747.87285806099 35704.383897987245 34339.44632589712 1.1020791318713348 1.094805520103909 1.1394133713190935 1.107236907920527 1.1463729550584725 1.0782466685064513 1.135930397328961 1.1097994369430113 0.982772772099415 1.0397483861311052 1.0 15.067579157697823 -8.757319454890284 24.25653685901655 0.9918649144748399 1.1147886524805035 0.7884514070081465 0.024253748412934782 14.071895780906148 82849.76032821878 0.003127033550258883 0.003482330686819878 1.7485600235522383e-09 8.757319454890284 0.12292373800566359 TVS(ph)EPNLK ddPTM_A549_MK2206_60min_R1 2 TVSEPNLK 8 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6;C9JF80;C9JAH2 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.001)VS(0.999)EPNLK;T(0.146)VS(0.854)EPNLK 131.82 0.0010738 72334000.0 26880.0 27521.0 25092.0 20920.0 32086.0 24771.0 22072.0 22672.0 33580.0 33905.0 33662.0 True False 31416.68684709586 28921.70134830478 28650.422905576277 26045.400939134484 27366.191904067186 27392.25077834096 26082.196695404335 25885.825430088 25974.183616241055 26245.83695195483 25302.79637606265 1.2416290428996681 1.1430239139759961 1.1323026308934216 1.029348715139421 1.0815481220864813 1.0825780032856371 1.0308029321248866 1.0230420798302322 1.0265341122854532 1.0372702116349608 1.0 14.62700921486194 -2.0000000000011964 0.3235798985703676 1.0089063253759034 3.2576906121390916 0.8765026573538792 0.024141162634457418 9.995484784075899 0.12462232474316219 0.006548888215064102 13.57338542596316 0.009999999999972453 2.0000000000011964 2.248784286763188 TVS(ph)EPNLK ddPTM_A549_PD325901_60min_R1 1 TVSEPNLK 8 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6;C9JF80;C9JAH2 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.142)VS(0.858)EPNLK 109.79 0.001645 50858000.0 11054.0 11718.0 10783.0 10897.0 12914.0 11526.0 11573.0 11756.0 11971.0 11298.0 13020.0 True False 12176.193942475298 12705.516984324584 11514.799223446536 11570.082941117398 12006.965190881436 11432.136077433119 12013.416847988601 11521.517357596409 11467.90050027387 10584.642351871262 11418.622540580214 1.0663452530463091 1.112701373495001 1.0084227920245654 1.0132643320154349 1.0515248356980305 1.0011834647134432 1.0520898475533778 1.0090111409367042 1.0043155783036464 0.9269631528894925 1.0 13.479101004529273 -2.000000000000016 0.26981670554740167 0.9998727023925854 1.6360001762808978 0.4381518373607308 0.03402103315372518 25.046187925195806 0.30961297646901537 0.00962344834672851 7.542775026253998 0.009999999999999632 2.000000000000016 0.6361274738883124 TVS(ph)FEALPIMR ddPTM_A549_MK2206_60min_R1 1 TVSFEALPIMR 11 0 O15084-2;O15084;O15084-4;O15084-1 O15084-2 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A 1 T(0.026)VS(0.974)FEALPIMR 47.302 0.011508 1258100.0 828.14 782.47 633.1 843.2 1065.4 821.35 612.93 789.87 1238.5 1157.1 1415.6 True False 967.9097859209063 822.2943808004086 722.8830998533538 1049.7840378526864 908.6810713268461 908.2647118319958 724.2914471055717 901.8364913754248 957.9817274780983 895.7103063591491 1064.0674514275527 0.9096319830311121 0.7727840746347598 0.6793583422587863 0.9865765900876833 0.8539694265694903 0.8535781360603296 0.6806818929888913 0.8475369584564598 0.9003016925222834 0.8417796307531673 1.0 10.055373891098613 -9.381189024956228 0.9525101650257302 0.979587173951582 0.8199852335630289 0.08462076708441157 0.09612649770542604 0.36876132102549397 0.7075735262963044 0.0243814666950525 0.018474999716567197 4.157296264342979e-10 9.381189024956228 -0.15960194038855313 TVS(ph)FEALPIMR ddPTM_A549_PD325901_60min_R1 4 TVSFEALPIMR 11 0 O15084-2;O15084;O15084-4;O15084-1 O15084-2 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A 1 T(0.086)VS(0.914)FEALPIMR;T(0.016)VS(0.984)FEALPIMR;T(0.011)VS(0.989)FEALPIMR;T(0.045)VS(0.955)FEALPIMR 76.92699999999999 0.00042125 10559600.0 5040.0 5693.5 4741.4 5131.200000000001 5915.6 5313.7 6305.3 5829.000000000001 6304.6 5992.9 6344.000000000001 True False 5551.657089748102 6173.31122633999 5063.17991635439 5448.142570199281 5500.108663712109 5270.426988951622 6545.251641892548 5712.736022237962 6039.639586837081 5614.50727124529 5563.728217929409 0.9978303885976302 1.1095637645358318 0.9100336533402233 0.9792251448664141 0.98856530158819 0.9472833291833688 1.176414696318222 1.0267820063223736 1.0855382129152216 1.0091268033460448 1.0 12.441836232180254 TVS(ph)GPGT(ph)PEPR ddPTM_A549_PD325901_60min_R1 1 TVSGPGTPEPR 11 0 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 2 T(0.122)VS(0.879)GPGT(0.999)PEPR 53.034 0.03294 4611700.0 1220.2 987.84 790.5 1368.3 1722.6 1457.0 931.11 964.41 1125.3 951.43 1487.7 True False 1344.0738057362366 1071.0887436247815 844.1480836626619 1452.8167833652315 1601.6105186473865 1445.1346750668104 966.5439005729424 945.1740859849905 1078.0075543361618 891.3565474279401 1304.722331307311 1.0301608039386405 0.8209323301392164 0.646994432000592 1.1135064898517772 1.227548942956007 1.1076185640348537 0.7408042902158967 0.7244254683967439 0.8262352291127074 0.6831771987337835 1.0 10.34952709232354 TVS(ph)LPTR ddPTM_A549_PD325901_60min_R1 1 TVSLPTR 7 0 O75037-3;O75037-4;O75037-2;O75037 O75037-3 KIF21B Kinesin-like protein KIF21B 1 T(0.204)VS(0.78)LPT(0.016)R 48.423 0.057083 2293500.0 737.9 1028.9 856.78 956.83 1110.5 728.47 1128.4 878.59 1075.7 992.75 915.83 True False 812.8110647867308 1115.609013924864 914.9262430366806 1015.9312159814044 1032.5023110170225 722.5375818434591 1171.341879484173 861.0658332094787 1030.4920698475153 930.0675955762254 803.1887159246987 1.01198018432188 1.3889749591918514 1.1391174015478296 1.2648723716340793 1.2855040049066409 0.8995863207709694 1.458364461875719 1.0720591763022305 1.2830011794440186 1.1579689519236496 1.0 9.649595190644792 -10.91914243611 1.0949127332979038 0.9963368326359319 1.2101038970709133 0.04438391647943574 0.1622807705134782 0.634003410456064 1.311188828447398 0.10648872344749495 0.023451131925132027 1.204640788014612e-11 10.91914243611 0.2137670644349814 TVS(ph)LTPS(ph)PTTQVETPDLVDHDNTSPLFR ddPTM_A549_PD325901_60min_R1 1 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 T(0.11)VS(0.696)LT(0.187)PS(0.745)PT(0.133)T(0.124)QVET(0.005)PDLVDHDNTSPLFR 76.476 2.4871e-06 5254700.0 869.29 892.27 1228.9 1073.2 1594.8 1090.2 1078.1 942.35 1025.9 1051.1 1524.6 True False 957.5396808625252 967.4647243218373 1312.3005439760223 1139.489126585958 1482.7867497613213 1081.3217726546586 1119.1276854589569 923.5540899907263 982.7849906633506 984.7333666181521 1337.0838652356829 0.716140330280437 0.7235632329998282 0.9814646471294513 0.8522196372365203 1.10897063999793 0.8087164917393256 0.8369913919062155 0.6907226345356691 0.7350212026454441 0.7364783857028869 1.0 10.384874242363423 -11.006616463295261 1.3298850380791183 0.9986645803405406 0.8235899907010394 0.0 0.14123913447822978 0.5566226007384754 1.774277116373178 0.08571893069842665 0.02013432512298272 9.848804952871834e-12 11.006616463295261 -0.17507458963950118 TVS(ph)PGS(ph)VSPIHGQGQVVENLK ddPTM_A549_MK2206_60min_R1 1 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 2 T(0.013)VS(0.987)PGS(0.738)VS(0.262)PIHGQGQVVENLK 176.14 7.7764e-36 30701000.0 4354.1 4665.7 5373.5 3772.6 7040.0 4583.2 4158.0 4872.4 6886.3 7277.0 6746.9 True False 5088.965632475448 4903.164201184028 6135.5431007139405 4696.887169358447 6004.425325831609 5068.191181918066 4913.454777976223 5563.077621099193 5326.564045161426 5633.120645904005 5071.458525032887 1.0034520853036941 0.9668153997477938 1.2098182545373677 0.9261412956794296 1.1839641981086046 0.9993557389656854 0.968844515581316 1.0969384041375192 1.0503021998246322 1.1107496232294387 1.0 12.30818500313794 -10.66765982097161 0.8838170766523523 0.9992839538105869 1.0460926557897174 0.0 0.0908999300156577 1.8455093736024237 2.5117318780431224 0.056308985147481845 0.014172521550413613 2.149513509820938e-11 10.66765982097161 0.04680870197913056 TVS(ph)PGS(ph)VSPIHGQGQVVENLK ddPTM_A549_PD325901_60min_R1 2 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 2 T(0.096)VS(0.868)PGS(0.703)VS(0.333)PIHGQGQVVENLK;T(0.071)VS(0.929)PGS(0.591)VS(0.409)PIHGQGQVVENLK 134.76 3.6538e-18 14066600.0 3947.1000000000004 3849.3 3657.9 4081.4 4832.799999999999 3930.1 4174.9 5085.0 4033.7 4618.0 4750.0 True False 4347.806686298556 4173.694020119527 3906.1470907395983 4333.498808468069 4493.360800254901 3898.0945686205023 4333.778104092941 4983.575685894668 3864.177616569605 4326.418691887191 4165.780112730875 1.0436956749136608 1.0018997419869728 0.937674813608663 1.0402610534398193 1.0786360966395994 0.9357417970064456 1.0403280986551966 1.1963127075921651 0.9275999961592898 1.0385614638337235 1.0 12.024370974581947 TVS(ph)PGSVS(ph)PIHGQGQVVENLK ddPTM_A549_MK2206_60min_R1 1 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 2 T(0.058)VS(0.882)PGS(0.285)VS(0.775)PIHGQGQVVENLK 130.14 6.5609e-18 33931000.0 3084.3 3757.7 3424.3 3543.0 4625.2 4033.9 3704.7 3330.2 5250.6 4926.9 5144.8 True False 3604.8544361048266 3948.950879565602 3909.9172308132042 4411.035159051313 3944.83920696539 4460.764620513892 4377.796035586462 3802.2660483097684 4061.347483485265 3813.909868119341 3867.2041707434846 0.9321603610630622 1.0211384517633062 1.0110449456982014 1.1406263968223003 1.0200752359570868 1.1534856768775912 1.132031266594547 0.9832079922428218 1.0502024988001748 0.9862189064059946 1.0 11.917075218812151 -5.186669747207928 1.8535186550610023 1.0442403677846992 0.8824526561005839 0.24641760726289808 0.059976615408718056 1.2459357271684803 3.7059572008717074 0.008515083445117267 0.3700007909406763 6.506242598357335e-06 5.186669747207928 -0.16178771168411532 TVS(ph)PGSVS(ph)PIHGQGQVVENLK ddPTM_A549_PD325901_60min_R1 2 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 2 T(0.179)VS(0.799)PGS(0.294)VS(0.728)PIHGQGQVVENLK;T(0.023)VS(0.948)PGS(0.312)VS(0.717)PIHGQGQVVENLK 130.14 6.5609e-18 97128000.0 10026.599999999999 9709.3 10162.400000000001 10404.099999999999 10971.8 10908.3 10193.7 10111.8 11526.900000000001 11183.0 11689.4 True False 11044.493050807203 10527.536785791315 10852.08157547558 11046.737627574508 10201.178618655173 10819.466421435334 10581.62683170668 9910.112216446358 11042.464478874528 10476.90347149728 10251.67790521185 1.0773351594661682 1.026908656624807 1.0585663806271646 1.077554106724174 0.9950740467049785 1.055384935175814 1.0321848705690497 0.966681972266038 1.0771372824014154 1.0219696295931153 1.0 13.323572436345286 TVS(ph)PPIR ddPTM_A549_MK2206_60min_R1 3 TVSPPIR 7 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 T(0.013)VS(0.987)PPIR;T(0.08)VS(0.92)PPIR;T(0.002)VS(0.998)PPIR 83.206 0.014613999999999999 40642500.0 8383.3 10053.5 9385.1 7450.7 12778.400000000001 9944.7 9125.1 9944.4 13881.3 13218.2 13708.3 True False 9798.196087993254 10565.180208029586 10716.048302691059 9276.121834474627 10898.714287444123 10997.041553242407 10783.012552792405 11354.049153447742 10737.207713881076 10232.19943956141 10304.150780166941 0.9508979727715621 1.025332454214962 1.0399739416970608 0.9002315700124431 1.0577013593804911 1.0672438503529196 1.0464727062755292 1.10189082008598 1.0420274259328257 0.9930172469191715 1.0 13.330937989159604 TVS(ph)PPIR ddPTM_A549_PD325901_60min_R1 1 TVSPPIR 7 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 T(0.008)VS(0.992)PPIR 86.33200000000001 0.013199 41397000.0 4621.2 4795.7 5861.7 5099.5 6667.5 4867.7 6047.1 5830.8 5846.3 5924.2 6358.5 True False 5090.340822052364 5199.850469510614 6259.510211265565 5414.484533195205 6199.197801626293 4828.059065080793 6277.2256996000915 5714.5001198258915 5600.600342055898 5550.145000969699 5576.44480985248 0.9128290506988851 0.932466947457904 1.1224911972958547 0.9709563562126315 1.1116756308021791 0.8657951848730867 1.1256680400583308 1.024756868341904 1.004331708288539 0.9952837677445827 1.0 12.445129928252527 -5.552705621859625 24.9952998460041 1.0144485746507546 0.9177382993854205 0.21791318095274548 0.07279750580062744 178.32448391944732 149437.8560996404 0.008633290611508434 0.03343734305406873 2.80087919829873e-06 5.552705621859625 -0.09671027526533404 TVS(ph)PPIRK ddPTM_A549_PD325901_60min_R1 2 TVSPPIRK 8 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 T(0.002)VS(0.998)PPIRK;T(0.023)VS(0.977)PPIRK 81.33800000000001 0.0015647 251840000.0 18338.9 17885.7 20027.1 19606.6 21965.0 21336.0 21764.0 20963.9 20233.7 20805.0 21622.0 True False 20200.65162761536 19392.9907088696 21386.259438735622 20817.655152180636 20422.254175136324 21162.24668992824 22592.240929717784 20545.758568638612 19383.34795358713 19491.36874939648 18962.63107315094 1.0652873828367269 1.022695143625296 1.1278107640356028 1.097825247555241 1.076973659211883 1.1159973849774318 1.191408557312808 1.0834867002042354 1.0221866300521913 1.0278831389065084 1.0 14.210871532226442 -8.760827932223181 3.8062430851194557 1.0096941673174014 1.0999691729667962 0.4514738263782595 0.03999509001804659 0.13645870022545267 4.237568931576423 0.0073051715346956 0.007975843018917678 1.7344910682079571e-09 8.760827932223181 0.09027500564939483 TVS(ph)PPTVCTIPTVVGR ddPTM_A549_PD325901_60min_R1 1 TVSPPTVCTIPTVVGR 16 0 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 T(0.078)VS(0.875)PPT(0.046)VCT(0.001)IPTVVGR 59.673 0.0047542999999999995 2109000.0 2387.4 2783.9 2488.5 2869.5 3245.9 2991.2 2873.8 2783.2 2578.7 2888.0 3006.2 True False 2629.767090489012 3018.509023097899 2657.384574566143 3046.7424978926633 3017.9191817470974 2966.840658929199 2983.164031603701 2727.6868926218367 2470.326206670807 2705.6511871308358 2636.4564578719064 0.9974627430834591 1.1449113881950388 1.0079379716785193 1.1556202602154604 1.1446876631458196 1.1253137331628726 1.13150513929278 1.0346034293407484 0.9369872956918863 1.026245352564928 1.0 11.364384454893582 -8.510199030975707 4.280452534385491 0.9704726448400705 1.1033175133704751 0.44889418293506056 0.05476125190982835 0.10980107456770763 4.822505010036077 0.008766900885082883 0.01031453930034426 3.0888795186011314e-09 8.510199030975707 0.13284486853040467 TVS(ph)PSTIR ddPTM_A549_MK2206_60min_R1 2 TVSPSTIR 8 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 TVS(0.794)PS(0.205)T(0.001)IR;T(0.061)VS(0.922)PS(0.016)T(0.001)IR 134.25 0.0010775000000000001 90209000.0 9661.9 10436.4 9939.3 9599.2 13542.9 11509.5 10457.3 10837.599999999999 15514.9 15782.3 15005.2 True False 11292.59250922453 10967.568182531459 11348.842196134001 11951.00443092447 11550.757350171149 12727.427650612233 12357.256048516296 12373.862988758015 12000.799922204234 12217.067468716614 11278.994717547845 1.0012055854282413 0.9723888038947417 1.0061927042555918 1.0595806390733664 1.0240945792979668 1.1284186196852206 1.095599063389124 1.0970714410839093 1.0639955264393737 1.0831698901063689 1.0 13.461350867442281 -6.103933171066552 3.984339285944321 1.048370228743027 0.9869887528732926 0.3683670337062346 0.03811243836425817 0.2560133710577607 7.119138531218163 0.006402356170967946 0.01846940806340713 7.87166909073603e-07 6.103933171066552 -0.061381475869734414 TVS(ph)PSTIR ddPTM_A549_PD325901_60min_R1 1 TVSPSTIR 8 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 T(0.186)VS(0.758)PS(0.056)TIR 119.75 0.0012157 65535000.0 7570.1 8318.9 7667.3 8676.0 9548.3 8642.3 8571.4 10129.0 9123.9 8939.6 9200.6 True False 8338.610979186918 9019.962898182084 8187.6490852204015 9211.896815374368 8877.660347846762 8571.919974145434 8897.589317450052 9926.969148953218 8740.454212216924 8375.152130358316 8068.984527408776 1.0334151652989634 1.1178560161496183 1.0147062567053569 1.1416426421544545 1.1002202715460752 1.0623294598010795 1.1026900952934866 1.2302625088985149 1.083216132405174 1.0379437588347764 1.0 12.978171408047046 -10.146225573828112 1.0442977794431147 1.008987235429826 1.0987985853296725 0.22673486075798666 0.05528687816665535 0.4194556658289232 0.9134266500024222 0.020790690874541346 0.010138226039482045 7.14125310948946e-11 10.146225573828112 0.08981134989984652 TVS(ph)SDGCSTPSR ddPTM_A549_MK2206_60min_R1 1 TVSSDGCSTPSR 12 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 TVS(0.499)S(0.499)DGCSTPSR 58.674 0.011618 2801600.0 395.41 501.5 600.62 547.33 448.35 550.84 509.47 452.27 897.93 853.15 700.27 True False 462.1455411536522 527.0242079203103 685.7969474552541 681.4258745705774 382.3983089256537 609.129523182001 602.0341043135029 516.3806575187856 694.5502886995629 660.4228224615919 526.3736325312038 0.877980036597399 1.0012359574053473 1.3028710122834648 1.2945668864410338 0.7264769458279899 1.1572189135934565 1.1437390991993008 0.9810154339145667 1.3195005330332337 1.2546654726715276 1.0 9.039943412189016 TVS(ph)SPPTSPR ddPTM_A549_PD325901_60min_R1 1 TVSSPPTSPR 10 0 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 T(0.001)VS(0.495)S(0.495)PPT(0.009)SPR 122.57 3.5354e-05 31730000.0 8356.1 8099.4 9453.0 9193.0 9453.1 10273.0 8501.7 8309.1 9886.0 9413.6 9371.0 True False 9204.405120564312 8781.964862846768 10094.537425506825 9760.830731182175 8789.146867424603 10189.34009400229 8825.236845808755 8143.368482137152 9470.525799491064 8819.223689464976 8218.426407663375 1.1199717152643174 1.068570116373849 1.2282810509922004 1.1876763563984178 1.0694440068513666 1.2398164306126913 1.0738353558267009 0.9908671171580687 1.1523526925616994 1.073103688224473 1.0 13.004646470395457 -7.959988812114447 24.992048457840287 1.06618216323407 1.1503709948130247 0.33671350142069467 0.06547208472662627 177.86026132323818 111095.8416512194 0.011720934223393716 0.016194786622899155 1.0965064429459685e-08 7.959988812114447 0.08418883157895474 TVS(ph)SSNGGESSSR ddPTM_A549_PD325901_60min_R1 1 TVSSSNGGESSSR 13 0 Q8WW12;Q8WW12-2 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 T(0.003)VS(0.77)S(0.111)S(0.111)NGGES(0.004)S(0.001)S(0.001)R 51.211000000000006 0.026649000000000003 1997000.0 400.5 358.33 412.06 374.89 393.53 350.86 354.1 401.87 370.22 363.14 485.24 True False 441.1584651674831 388.52772665924425 440.02486951807276 398.04610386303597 365.8898104047987 348.0027124872624 367.5754692709551 393.8543875890836 354.66094087473 340.2112784261399 425.55855618979564 1.0366574910803346 0.9129829984806229 1.0339937080758053 0.935349784591126 0.8597872257128696 0.8177551771090604 0.8637482760586759 0.925499868021518 0.8334010342787095 0.7994464533205354 1.0 8.733213847919323 -6.51382583956026 22.756952309373403 0.9037727845018683 0.9861024508327066 0.3483252362534167 0.06515678165015941 163.28964409996885 410469.87900709437 0.010493462012173408 0.022838947485690486 3.063191586156212e-07 6.51382583956026 0.08232966633083838 TVSAS(ph)ESEDRLVAEQETEPSK ddPTM_A549_MK2206_60min_R1 1 TVSASESEDRLVAEQETEPSK 21 1 H3BNE2;Q9ULG6-3;Q9ULG6-4;Q9ULG6-2;Q9ULG6;Q9ULG6-5 H3BNE2 CCPG1 Cell cycle progression protein 1 1 T(0.042)VS(0.152)AS(0.632)ES(0.174)EDRLVAEQET(0.001)EPSK 42.659 0.017946 10128000.0 2558.3 2590.4 1891.5 3166.0 3361.2 2445.8 2481.4 2345.4 4814.2 4251.6 3184.6 True False 2990.078495570137 2722.2402955070206 2159.743142272339 3941.670142127139 2866.7719325547155 2704.6129326093574 2932.2382602381417 2677.8676324862577 3723.7913866976664 3291.160607135561 2393.7759295112937 1.249105423238416 1.1372160033636838 0.9022327928217014 1.6466328755055444 1.1975941011070268 1.1298521717366936 1.2249426623805926 1.118679321432129 1.5556140158272478 1.3748824886076427 1.0 11.225072399135609 TVSAS(ph)S(ph)TGDLPK ddPTM_A549_PD325901_60min_R1 1 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 2 T(0.025)VS(0.345)AS(0.63)S(0.857)T(0.143)GDLPK 130.56 6.344900000000001e-18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TVSAS(ph)STGDLPK ddPTM_A549_MK2206_60min_R1 1 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 TVSAS(0.877)S(0.116)T(0.007)GDLPK 270.93 4.7008999999999986e-77 30815000.0 10381.0 11800.0 11145.0 9502.3 14349.0 10527.0 9649.1 11080.0 17225.0 15624.0 16836.0 True False 12133.059008917482 12400.569598124941 12725.528586109029 11830.363926574457 12238.281108005365 11640.960152742948 11402.216570026541 12650.623931076887 13323.565002672785 12094.527548660732 12655.156550038342 0.9587442842720679 0.9798827496991628 1.0055607400661095 0.9348255693082369 0.9670588474836597 0.9198590398083758 0.9009937194330476 0.9996418361998499 1.052817082901469 0.955699560162619 1.0 13.6274377339018 -8.511977380254038 23.503856770582054 1.0250091980690261 0.9538784712212777 0.2538896844643076 0.035757229374527466 148.46744934450373 320103.4653420836 0.0055345196805106755 0.006486130681612721 3.0762570340007894e-09 8.511977380254038 -0.07113072684774846 TVSASS(ph)TGDLPK ddPTM_A549_MK2206_60min_R1 1 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 TVSAS(0.051)S(0.899)T(0.051)GDLPK 288.61 1.1502999999999995e-109 29946000.0 11638.0 14313.0 11895.0 11308.0 16275.0 13594.0 10914.0 12012.0 19395.0 18678.0 19508.0 True False 13602.209878218056 15041.470564234101 13581.889863774508 14078.46050763541 13880.96905936213 15032.50805703312 12896.932526895751 13714.737785207173 15002.063467450715 14458.62682756563 14663.625206589933 0.927615762581352 1.025767526946499 0.9262300196864492 0.9600941315186133 0.9466260125854777 1.0251563201627254 0.879518696447573 0.9352897112402788 1.0230801221452854 0.9860199387166431 1.0 13.839954196596613 -8.765963970057546 24.99988659782422 1.0108989490135893 0.9547429073327435 0.21866316403089692 0.0410865796978184 101.63742505380122 561579.9276639187 0.006659711904343889 0.00720526434683582 1.7140995067474452e-09 8.765963970057546 -0.05615604168084587 TVSASS(ph)TGDLPK ddPTM_A549_PD325901_60min_R1 1 TVSASSTGDLPK 12 0 P78362;H7C5L6;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 TVSAS(0.001)S(0.996)T(0.003)GDLPK 213.99 1.2469000000000001e-31 14231000.0 7854.6 8693.2 7037.5 8932.0 8472.3 8625.6 8141.7 10013.0 9744.6 8776.7 9178.5 True False 8651.993209749095 9425.80647278805 7515.107069925349 9483.709353956185 7877.234875848287 8555.355973408568 8451.536848809194 9813.282859953464 9335.068349759316 8222.537664159008 8049.602687305331 1.0748348143186952 1.1709654300892476 0.9335997516718544 1.1781586896099256 0.9785867926464399 1.0628295961614154 1.0499321739367007 1.2191015185668175 1.1596930572090516 1.021483666159872 1.0 12.974701861032187 TVSDNS(ph)LSNSR ddPTM_A549_MK2206_60min_R1 1 TVSDNSLSNSR 11 0 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 1 T(0.001)VS(0.027)DNS(0.964)LS(0.007)NS(0.001)R 46.797 0.033381 6789300.0 2008.5 1979.1 1589.9 1853.4 1943.4 1213.3 1456.2 1787.2 2231.4 3027.8 3278.4 True False 2347.4856968895847 2079.827736580429 1815.3717271471278 2307.483083202287 1657.5284344064128 1341.690600676642 1720.7726906418895 2040.5410730704527 1725.9914628135862 2343.817877101573 2464.282800762991 0.9526040177542757 0.8439890648656366 0.7366734558976156 0.9363710538773571 0.6726210294910994 0.544454800504726 0.6982853956977276 0.8280466318389516 0.700403160821958 0.9511156253559373 1.0 11.26695211368463 -10.836656770323989 1.0072046533519017 1.0043500077449947 0.7607085724634559 0.3249120149255421 0.11429812532956182 0.5034229566776978 0.8795045203016977 0.08994364615773999 0.020539775633765144 1.4566098071632223e-11 10.836656770323989 -0.2436414352815388 TVSDNS(ph)LSNSR ddPTM_A549_PD325901_60min_R1 2 TVSDNSLSNSR 11 0 B7ZL14;H0Y7W6;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 B7ZL14 FNBP1 Formin-binding protein 1 1 TVS(0.003)DNS(0.86)LS(0.137)NS(0.001)R;TVSDNS(0.975)LS(0.025)NSR 105.43 0.00017561 17865300.0 8818.7 9660.6 8993.3 9860.2 11911.5 10026.3 9335.3 9604.1 10671.1 10977.3 11629.3 True False 9713.96793201618 10474.73266587865 9603.639419106163 10469.242159861044 11074.877332444185 9944.64913700917 9690.559949972176 9412.5386912293 10222.630776749851 10284.191404602258 10198.969824206555 0.9524459920413475 1.0270383035174386 0.9416283786145325 1.0264999642427626 1.0858819589953803 0.975064080825715 0.9501508600380694 0.9228911207178283 1.0023199355377186 1.008355900827693 1.0 13.316135815612267 -9.604325674579961 0.004940955225312361 1.226499322293278 0.764198706717599 0.0 0.04529477298869412 64437.86494650001 136.62766447550212 6463.239309970344 6319.228085746817 2.486991640141095e-10 9.604325674579961 -0.46230061557567903 TVSFS(ph)SMPSEK ddPTM_A549_PD325901_60min_R1 1 TVSFSSMPSEK 11 0 H3BUD4;A0A0A0MT40;Q15111 H3BUD4 PLCL1 Phosphoinositide phospholipase C;Inactive phospholipase C-like protein 1 1 T(0.001)VS(0.047)FS(0.49)S(0.432)MPS(0.031)EK 43.628 0.023086000000000002 6008000.0 7178.0 6316.7 6357.6 6073.6 8256.2 8462.7 6448.4 7183.6 9112.2 8667.6 9337.8 True False 7906.7052758356895 6849.030477460575 6789.064967354512 6448.7524778535935 7676.312994343753 8393.782576999241 6693.797390699874 7040.317462574816 8729.24592252908 8120.3262567781285 8189.30979719123 0.96549104523406 0.8363379389810915 0.8290155257874144 0.7874598272085624 0.9373577486318292 1.0249682555516633 0.8173823626742894 0.8596960716994129 1.0659318231584105 0.9915763914027576 1.0 12.999526149943547 -8.758136775693412 24.999748002051884 1.0311344757928098 0.8801882563612689 0.4340575422787494 0.06925303114589075 52.994435032574614 401151.96396836854 0.012190683482911715 0.013545417831639603 1.7452724143258952e-09 8.758136775693412 -0.15094621943154096 TVSGPGT(ph)PEPR ddPTM_A549_MK2206_60min_R1 2 TVSGPGTPEPR 11 0 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 TVS(0.001)GPGT(0.999)PEPR;TVS(0.004)GPGT(0.996)PEPR 101.35 1.4646000000000001e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TVSGPGTPEPRPAT(ph)PGASSVEQLR ddPTM_A549_MK2206_60min_R1 2 TVSGPGTPEPRPATPGASSVEQLR 24 1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 T(0.001)VS(0.002)GPGT(0.025)PEPRPAT(0.767)PGAS(0.094)S(0.111)VEQLR;TVS(0.001)GPGT(0.005)PEPRPAT(0.934)PGAS(0.051)S(0.008)VEQLR 89.23899999999999 1.2154000000000001e-07 45454000.0 8494.3 9769.0 8069.5 8442.8 11731.3 8466.9 8616.0 9710.7 13333.900000000001 12744.8 13699.1 True False 9927.930174303798 10266.200373227337 9213.876440162123 10511.286379011692 10005.641310359142 9362.861738126643 10181.415672689545 11087.221462771511 10313.792939862902 9865.74082835198 10297.235394074023 0.9641354979626126 0.9969860822192579 0.8947912801395834 1.0207872284886148 0.9716822940764576 0.9092597556344973 0.9887523478922187 1.076718268395818 1.0016079603073276 0.9580960763536235 1.0 13.329969433596165 -7.993166268904949 24.995786704914202 1.0077278273027752 0.9606327227685665 0.23487374934698402 0.041962033524813896 182.33041152448018 666906.7293665042 0.005876249015846255 0.008108503228363078 1.0158596982519719e-08 7.993166268904949 -0.04709510453420873 TVSGPGTPEPRPAT(ph)PGASSVEQLR ddPTM_A549_PD325901_60min_R1 2 TVSGPGTPEPRPATPGASSVEQLR 24 1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 TVSGPGT(0.001)PEPRPAT(0.948)PGAS(0.038)S(0.013)VEQLR;TVSGPGT(0.002)PEPRPAT(0.997)PGAS(0.001)SVEQLR 136.34 2.5030999999999998e-23 131418000.0 13191.7 13441.7 13245.7 12706.4 15854.8 14234.8 13146.5 14584.7 14607.1 15305.400000000001 15161.5 True False 14530.91167278373 14574.479232650261 14144.632854864676 13491.24546967184 14741.213544090673 14118.876508332893 13646.797251540838 14293.796717024192 13993.214384558556 14339.014431964099 13296.731616667192 1.0928183023991789 1.0960948639725447 1.0637676432556296 1.014628696631045 1.1086343598612498 1.0618305998321542 1.026327194153099 1.074985728004557 1.0523799974287167 1.0783863918852379 1.0 13.69878404934398 -14.999999999391395 0.120617779962546 0.7752204052725089 1.0986195475954692 0.0 0.03449771865257363 47.860811674281344 0.40165364426697037 2.6024659342905445 0.09448796040025946 1.0000000014013641e-15 14.999999999391395 0.3233991423229603 TVSGPGTPEPRPAT(ph)PGASSVEQLRK ddPTM_A549_MK2206_60min_R1 4 TVSGPGTPEPRPATPGASSVEQLRK 25 2 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 TVSGPGTPEPRPAT(1)PGASSVEQLRK;TVSGPGTPEPRPAT(1)PGASSVEQLRK;TVSGPGTPEPRPAT(1)PGASSVEQLRK;TVSGPGTPEPRPAT(1)PGASSVEQLRK 191.51 5.725499999999999e-58 208453000.0 12790.099999999999 15388.2 15025.0 13916.800000000001 18611.2 14056.800000000001 13105.800000000001 12264.8 21636.5 21954.300000000003 23184.5 True False 14948.756192077393 16171.393651683571 17155.770929231767 17326.416624748887 15873.517134107566 15544.281245851345 15486.954215777003 14003.372959374712 16735.867296390687 16994.80838207646 17427.14879035187 0.8577855374915615 0.9279425938359167 0.9844278680130198 0.9942198137621485 0.9108499230175602 0.8919577971616948 0.8886682728244675 0.803537809186971 0.9603330698396347 0.9751915580984329 1.0 14.089048932805651 -8.981545210910943 18.968608396563702 0.9825012989817389 0.910628388152002 0.28773951125484776 0.05061885598825985 8.430766302955453 8666.674898975423 0.009704387323598537 0.00990013553400429 1.0434095060899389e-09 8.981545210910943 -0.0718729108297369 TVSGPGTPEPRPAT(ph)PGASSVEQLRK ddPTM_A549_PD325901_60min_R1 4 TVSGPGTPEPRPATPGASSVEQLRK 25 2 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 TVSGPGTPEPRPAT(1)PGASSVEQLRK;TVSGPGTPEPRPAT(0.985)PGAS(0.006)S(0.008)VEQLRK;TVSGPGTPEPRPAT(1)PGASSVEQLRK;TVSGPGTPEPRPAT(0.996)PGAS(0.002)S(0.002)VEQLRK 240.19 1.5136999999999998e-111 405238000.0 17419.0 18511.9 18451.600000000002 20311.8 22385.7 24138.9 21965.5 24203.9 21790.0 23260.100000000002 25862.399999999998 True False 19187.364056809954 20071.962780518705 19703.836534484482 21566.413754555237 20813.405658472537 23942.320801626793 22801.409122482793 23721.134226907783 20874.242076766157 21791.453316406496 22681.488755261256 0.8459481766759779 0.8849490876502876 0.868718837069896 0.950837662697632 0.9176384267829247 1.05558859296981 1.0052871470878966 1.0458367386226077 0.9203206324771831 0.960759390688219 1.0 14.469227717772371 -6.406715313162513 1.5407748779541377 0.9767434293570497 0.8617389448149847 0.6054709673757002 0.042176438409907875 0.2697352751544053 1.221585422087872 0.0072235770130802636 0.024230900452348686 3.9199875423039624e-07 6.406715313162513 -0.11500448454206502 TVSLGAGAKDELHIVEAEAMNYEGS(ph)PIK ddPTM_A549_MK2206_60min_R1 3 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.022)EGS(0.978)PIK 182.11 1.1737e-66 48972700.0 3049.63 2864.68 2741.45 2787.02 4996.6 4164.29 4319.29 4419.27 5943.65 4198.5599999999995 5061.900000000001 True False 3564.332987704944 3010.47997596242 3130.228832874704 3469.8400251140824 4261.606758955999 4604.952403768019 5104.049083204646 5045.715055946763 4597.4227650586945 3250.1023799734385 3804.8905286670906 0.9367767510918593 0.7912132959622983 0.8226856487172758 0.9119421436625718 1.1200340001500393 1.2102719826163308 1.3414443976112684 1.3261130689387668 1.2082930456002474 0.854190772503512 1.0 11.893639230895229 -6.713215383798247 3.3354604437987363 1.1477371217707792 0.8470029474615528 0.5175511709724196 0.13379043811772365 0.14974475322716377 3.4033060331982514 0.019286200107997253 0.04138169611815853 1.935461853859203e-07 6.713215383798247 -0.30073417430922644 TVSLGAGAKDELHIVEAEAMNYEGS(ph)PIK ddPTM_A549_PD325901_60min_R1 5 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 1 TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.029)EGS(0.971)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.001)EGS(0.999)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK 242.07 9.152899999999998e-121 193680900.0 13127.800000000001 14866.7 16011.3 16938.8 18065.8 15628.8 15227.2 16985.5 15485.1 15894.2 19415.2 True False 14460.52459182442 16119.568983688192 17097.923101768476 17985.07120519403 16796.92053162659 15501.524234512115 15806.679428643556 16646.710877633017 14834.3150978858 14890.637499478855 17027.253483093158 0.8492576096422528 0.9466922542554363 1.004150382722938 1.056252038712639 0.9864726891101215 0.9103948707819507 0.9283164454172516 0.9776509696153879 0.8712100934314045 0.8745178730242191 1.0 14.05555812484935 -7.244667331833953 24.075576729216802 0.9382674147044654 0.9741983113930133 0.08868397940797934 0.059502429394154774 1244.308274135667 1786149.580952531 0.009786252314929056 0.01691706276615418 5.6928883727595815e-08 7.244667331833953 0.035930896688547875 TVSLGAGAKDELHIVEAEAMNYEGSPIK ddPTM_A549_MK2206_60min_R1 2 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 147.28 9.2513e-36 8913400.0 4081.1 4648.0 5447.8 4868.400000000001 6727.799999999999 5424.9400000000005 5464.5 6025.700000000001 7457.299999999999 7145.1 6585.4 False True 4769.88990668463 4884.563346786842 6220.379957954667 6061.158218550779 5738.149532262767 5999.003550016274 6457.328916366299 6879.861427932307 5768.233456861055 5531.016947512533 4950.06343220614 0.9636017744036847 0.9867678290760599 1.256626312601084 1.2244607168295312 1.1592072729672869 1.211904379039976 1.3044941756409782 1.3898531851471845 1.1652847556117627 1.1173628425701758 1.0 12.273231297277139 -10.216102267429292 1.0433304220506407 1.0161268037500983 1.1879081693758848 0.11615634477945813 0.12221365411196576 0.5244878997983085 1.1331720988685463 0.05110944847274669 0.02357641830101805 6.079918148375065e-11 10.216102267429292 0.1717813656257865 TVSLGAGAKDELHIVEAEAMNYEGSPIK ddPTM_A549_PD325901_60min_R1 3 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748;P06748-2;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ;; 161.72 3.1735999999999997e-45 14445000.0 6250.32 6526.58 6575.41 6677.57 7603.67 7388.0 6215.34 8094.5 7229.539999999999 6678.200000000001 7127.4400000000005 False True 6884.84788515761 7076.597801634501 7021.656863752444 7090.028333038199 7069.614450437461 7327.834577483597 6451.868164864552 7933.048847487593 6925.7075752025685 6256.537312291259 6250.810064564752 1.1014329045425901 1.1321089152510107 1.123319504388327 1.1342575217939985 1.1309917238590295 1.1723015900010136 1.0321651271152166 1.2691233241047097 1.1079696077255246 1.0009162408819576 1.0 12.609827450500918 -10.117248819421324 0.8697824553861009 1.0080197317098778 1.1342662483284482 0.46349529578002724 0.0545581929758662 0.34298369222082686 0.5163733791528522 0.022869451904964106 0.01005140662235391 7.63398286092826e-11 10.117248819421324 0.12624651661857045 TVSLPLS(ph)SPNIK ddPTM_A549_PD325901_60min_R1 2 TVSLPLSSPNIK 12 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.629)S(0.371)PNIK;TVSLPLS(0.657)S(0.343)PNIK 241.84 1.0468999999999999e-50 54093000.0 10622.8 11969.7 11697.5 12049.8 13379.4 11863.0 12138.199999999999 12326.5 13104.0 12286.5 13222.9 True False 11701.218835907954 12978.428626665796 12491.36269278178 12794.088778918634 12439.677100424275 11766.391661165108 12600.125843277894 12080.638287547814 12553.284450387506 11510.728293172786 11596.567126869277 1.009024369703013 1.1191612556266537 1.0771603834240961 1.1032651852007735 1.0727034099256416 1.0146443798787959 1.0865392926569941 1.0417426256738465 1.082500046181901 0.992597909988586 1.0 13.501410174383821 -10.898200361718843 0.751134393297934 0.9912587776352539 1.0701441596260213 0.41097226317391466 0.032590958278929105 0.7334403139865276 0.5941918898240798 0.03751285688846972 0.005821360609990849 1.2641529960497578e-11 10.898200361718843 0.07888538199076733 TVSLPLSS(ph)PNIK ddPTM_A549_MK2206_60min_R1 2 TVSLPLSSPNIK 12 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.093)S(0.907)PNIK;TVSLPLS(0.02)S(0.98)PNIK 184.03 3.3571999999999994e-19 47483000.0 5193.5 6411.299999999999 5700.6 5068.3 7910.1 5716.6 5367.799999999999 5560.2 8219.8 7421.9 7983.8 True False 6070.035831115786 6737.607785123593 6509.030799279779 6310.033727524635 6746.534768446106 6321.5268176280315 6343.059778071369 6348.375377398348 6358.028424323347 5745.287635266586 6001.202118329542 1.011469987417355 1.12270969253724 1.0846211593839123 1.0514616243721946 1.1241972250593069 1.0533767556870177 1.0569648635392044 1.0578506192964958 1.0594591381789902 0.9573561299858052 1.0 12.551035804790015 -10.558961693236139 0.35183947645682884 0.9768297214425431 1.0793118698159514 0.5120730767493671 0.033094902431698305 1.7030028565286617 0.2899423736165447 0.0670491515303696 0.011063141120461736 2.7608213625792042e-11 10.558961693236139 0.1024821483734083 TVSLPLSS(ph)PNIK ddPTM_A549_PD325901_60min_R1 2 TVSLPLSSPNIK 12 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.091)S(0.909)PNIK;TVSLPLS(0.114)S(0.886)PNIK 173.72 8.0296e-16 47996700.0 8933.3 7960.0 8332.4 8971.4 9718.0 9382.7 9674.7 9260.5 9213.7 9328.8 10217.3 True False 9840.20203965212 8630.81713562243 8897.88677079161 9525.543002472301 9035.441205279985 9306.290402024266 10042.876002698984 9075.792062778286 8826.48023050484 8739.777975937037 8960.636872801088 1.098158778146768 0.9631923777449587 0.9929971381610221 1.06304307804124 1.0083481044417677 1.038574660945403 1.1207770323985453 1.0128512282789561 0.9850282246451183 0.9753523214924108 1.0 13.129385559420294 -8.518652368609974 24.27230258325238 0.9932462908872762 1.0376806090942918 0.2316361945776374 0.042688647640907414 153.4217570049295 881112.6895603181 0.006980458076794543 0.008009117549294417 3.0293372935106264e-09 8.518652368609974 0.0444343182070156 TVSLTPS(ph)PTTQVETPDLVDHDNT(ph)SPLFR ddPTM_A549_MK2206_60min_R1 1 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 T(0.001)VS(0.004)LT(0.095)PS(0.598)PT(0.141)T(0.152)QVET(0.01)PDLVDHDNT(0.561)S(0.438)PLFR 70.986 0.00023517 2932400.0 638.94 775.34 569.02 587.28 924.61 503.41 649.61 664.93 1039.6 898.57 652.28 True False 746.7774514167938 814.8014942551009 649.7155922896146 731.1636263640012 788.6010938234606 556.6805120634871 767.6357283119607 759.185863762721 804.1322599000652 695.582412916032 490.3008739878247 1.523100388018762 1.6618397752954737 1.3251365166967837 1.491254992913102 1.6084023824176243 1.1353855185608148 1.5656421781761354 1.5484081388392006 1.6400791892531557 1.4186848317413054 1.0 8.93752352308255 -10.847201636788423 1.0412254126783145 0.9937415693997945 1.50423226760865 0.14865465916779375 0.18748275902269046 0.28125391892256274 0.5304497776458932 0.10712659518706708 0.02492590932893709 1.4216685732499487e-11 10.847201636788423 0.5104906982088554 TVSLTPSPT(ph)TQVETPDLVDHDNTSPLFR ddPTM_A549_MK2206_60min_R1 1 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TVS(0.001)LT(0.015)PS(0.08)PT(0.452)T(0.452)QVET(0.001)PDLVDHDNTSPLFR 98.37 3.1025e-10 48625000.0 549.85 799.92 750.54 331.0 987.61 896.3 738.6 495.1 883.57 793.84 1336.3 True False 642.6512374581713 840.632511265432 856.9778577853982 412.09501485915456 842.3338772790563 991.1458710842122 872.7940594067436 565.2819411801597 683.4428057713549 614.510992654176 1004.4598299962131 0.6397978478249291 0.8369000791884342 0.853172851908502 0.41026530136173606 0.8385938910889368 0.9867451554413569 0.8689188291482339 0.5627720734061519 0.680408300423454 0.6117825465021262 1.0 9.972204154134925 -10.812147032272524 1.057928156965626 1.000099613410298 0.7434830338975972 0.0 0.19175389085692507 0.5748434829785413 1.141868771291594 0.108977719369391 0.02707381241229812 1.5411785919468925e-11 10.812147032272524 -0.2566165795127008 TVSLTPSPT(ph)TQVETPDLVDHDNTSPLFR ddPTM_A549_PD325901_60min_R1 1 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TVS(0.001)LT(0.019)PS(0.116)PT(0.725)T(0.139)QVETPDLVDHDNTSPLFR 149.14 8.3433e-36 45790000.0 2887.0 3017.9 2757.3 2388.3 3810.7 3080.1 3461.5 3615.1 3260.9 3067.8 3624.2 True False 3180.0861147029304 3272.22902432097 2944.426958991851 2535.8198667771576 3543.04957820132 3055.0166868038987 3593.229276705482 3542.993994508912 3123.8557130852123 2874.098584445975 3178.446375696682 1.0005158932423042 1.029505814331611 0.9263730171777598 0.7978174136165291 1.1147111385274577 0.9611666599642635 1.1304986310860392 1.1146936508350953 0.9828247337979694 0.9042463659044753 1.0 11.634106033257217 -6.789350900795996 24.99999441449476 1.0165464009220249 0.9441793109489871 0.1955377528057909 0.08609552320662857 313.3094086937126 280626.4815228427 0.011859504219517137 0.022415798519698195 1.624235877047273e-07 6.789350900795996 -0.07236708997303776 TVSLTPSPTTQVETPDLVDHDNT(ph)SPLFR ddPTM_A549_MK2206_60min_R1 2 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TVSLTPSPTTQVETPDLVDHDNT(0.5)S(0.5)PLFR;TVSLTPSPT(0.003)T(0.009)QVET(0.139)PDLVDHDNT(0.425)S(0.425)PLFR 170.6 5.7311e-57 44043800.0 1860.4099999999999 1875.77 1975.42 1518.25 2673.98 1725.71 1764.47 2096.86 3066.33 2170.49 2753.6800000000003 True False 2174.4017253424686 1971.2386809385432 2255.564260167923 1890.2213181568331 2280.6410841998877 1908.323486766413 2085.0513593303776 2394.0963263644308 2371.8111509228224 1680.1748015292262 2069.865258298266 1.0505039961539078 0.9523512088700845 1.0897155025551417 0.9132098384562837 1.101830698909798 0.9219554167189298 1.007336758260582 1.1566435625537919 1.145877076497627 0.8117314858024031 1.0 11.015321140545199 -8.049635445636891 24.632333571262865 1.0776118847821543 1.003129105517413 0.0 0.10632658087088974 417.51492199582486 207197.01392438993 0.012290833682909773 0.015867526112414054 8.919993838017118e-09 8.049635445636891 -0.07448277926474134 TVSLTPSPTTQVETPDLVDHDNT(ph)SPLFR ddPTM_A549_PD325901_60min_R1 1 TVSLTPSPTTQVETPDLVDHDNTSPLFR 28 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TVSLTPSPTTQVET(0.003)PDLVDHDNT(0.569)S(0.428)PLFR 98.009 3.7044e-10 36872000.0 2911.4 3116.9 2577.4 2941.5 4540.2 3946.7 3250.5 3602.2 3632.6 3765.0 4429.0 True False 3206.963184740599 3379.572101761501 2752.317863165269 3123.1897743688023 4221.312014839697 3914.559383724213 3374.19955624185 3530.351295128769 3479.9344547067817 3527.2772574610785 3884.261077744221 0.8256301830779712 0.8700682148081 0.708582097875788 0.8040627835919284 1.0867735021795235 1.00780027536089 0.8686850571335467 0.9088862011250324 0.8959064246854768 0.9080947925131592 1.0 11.923424458361591 -6.651424762650547 12.197001074144247 0.9524502168986307 0.7996852398365587 0.5325113887142552 0.06834105415538771 0.28953859961100364 30.513340684490352 0.010371471476846838 0.02159280409182292 2.231388740675807e-07 6.651424762650547 -0.15276497706207204 TVSPDRLELEAAQK ddPTM_A549_PD325901_60min_R1 1 TVSPDRLELEAAQK 14 1 Q14974;J3QR48 Q14974 KPNB1 Importin subunit beta-1 0 102.5 2.7613e-05 5198600.0 1990.8 1955.4 2097.9 2206.1 1895.3 1714.0 1866.1 2359.5 2259.7 2184.6 2351.9 False True 2192.9045504504984 2120.188420476898 2240.276109697531 2342.3657865833807 1762.1806664300423 1700.0417522748892 1937.1154566691027 2312.437921508059 2164.7326673184257 2046.6639831738307 2062.6312099224724 1.0631588138011945 1.0279047511147614 1.0861253814644527 1.1356202579090338 0.8543362758950384 0.8242102340431415 0.9391477484440433 1.1211107009260157 1.049500587843714 0.9922588067746527 1.0 11.010270180933757 TVSPGSVS(ph)PIHGQGQVVENLK ddPTM_A549_MK2206_60min_R1 2 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 1 TVSPGS(0.003)VS(0.997)PIHGQGQVVENLK;TVSPGS(0.025)VS(0.975)PIHGQGQVVENLK 189.18 3.5092999999999996e-45 165665000.0 6068.1 6078.8 6536.5 7932.599999999999 7135.9 5801.5 4728.7 5350.7 8884.7 9297.099999999999 12588.2 True False 7092.24692919875 6388.184955345925 7463.473988613876 9876.08735610794 6086.21856286957 6415.410879275975 5587.843580715767 6109.178110831511 6872.329635950474 7196.878652883628 9462.202523354286 0.749534467444964 0.6751266356409963 0.7887670941509425 1.0437408554437635 0.643213728288712 0.6780039703696551 0.5905436463576045 0.6456401768777454 0.7262928075137288 0.760592328807224 1.0 13.207960324428603 -10.505627770986331 0.8819337165004604 0.9956406560069694 0.7278752920654408 0.07573027178045644 0.13259141212542672 0.45048730263420145 0.6435673954840587 0.07393352352774278 0.02254016234772526 3.121563895878094e-11 10.505627770986331 -0.2677653639415286 TVSPGSVS(ph)PIHGQGQVVENLK ddPTM_A549_PD325901_60min_R1 2 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 1 TVSPGS(0.027)VS(0.973)PIHGQGQVVENLK;TVSPGS(0.004)VS(0.996)PIHGQGQVVENLK 285.16 3.0698999999999993e-128 318770000.0 13254.2 14802.8 15078.8 15739.1 19825.5 17159.4 16640.7 17959.3 17126.9 17937.0 18565.2 True False 14599.756626773673 16050.283906431114 16102.138044190448 16711.26846091041 18433.025274262018 17019.659535580933 17273.970944640445 17601.087672701706 16407.115953399098 16804.45475885242 16281.798094499201 0.8966919097041374 0.9857807972605738 0.9889655891034878 1.0263773303119577 1.132124668742183 1.045318179036443 1.0609375478299568 1.0810284939381618 1.0076968070831338 1.0321006722549764 1.0 13.990972413230441 -5.202174971546189 1.3885260794285041 1.0256895226831546 0.8327167642422353 0.512158705811143 0.040270084484131635 1.1329790394038564 1.7191667681462137 0.006721152423849006 0.31608958084154587 6.2780537331016735e-06 5.202174971546189 -0.19297275844091932 TVSQQS(ph)FDGVSLDSSGPEDR ddPTM_A549_MK2206_60min_R1 2 TVSQQSFDGVSLDSSGPEDR 20 0 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 TVS(0.005)QQS(0.994)FDGVSLDSSGPEDR;TVSQQS(0.999)FDGVS(0.001)LDSSGPEDR 130.0 9.569e-17 4134600.0 1449.1 1384.12 1515.72 1903.96 2274.8999999999996 1783.0 2025.3600000000001 2070.4700000000003 2221.8999999999996 2307.7 2804.2 True False 1693.6726529064963 1454.5657959454818 1730.6718877108276 2370.4302854720127 1940.265223541808 1971.6758765403872 2393.3416953155192 2363.965463048444 1718.6431976452045 1786.3889672327439 2107.839748017197 0.8035111087072442 0.6900741848680684 0.8210642622802973 1.1245780366851081 0.9204994000929041 0.9354012222205713 1.1354476532511013 1.121510999720059 0.8153576187477715 0.8474975239048246 1.0 11.041549472543695 -6.011733584190306 23.20392483252749 0.9559870886437714 0.7489866856996282 0.42922317653131736 0.10855986466365669 178.85728812141505 353708.99802372605 0.01657653985603566 0.04684465664587955 9.733441338346808e-07 6.011733584190306 -0.20700040294414312 TVSQQS(ph)FDGVSLDSSGPEDR ddPTM_A549_PD325901_60min_R1 2 TVSQQSFDGVSLDSSGPEDR 20 0 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 TVSQQS(0.999)FDGVS(0.001)LDSSGPEDR;TVSQQS(0.999)FDGVS(0.001)LDSSGPEDR 161.95 5.041e-27 8400900.0 3526.1 3344.6000000000004 3521.0 3416.7 4695.200000000001 3752.4 3374.0 4259.0 3971.3 3715.0 3345.1 True False 3884.0670762223745 3626.461179874719 3759.9562334930242 3627.741799111297 4365.425349560673 3721.8416985042536 3502.3994163236453 4174.050903879133 3804.400071567758 3480.4342659941344 2933.6739063360114 1.3239600583533666 1.2361500615465333 1.2816544556545453 1.2365865856038976 1.48804041926147 1.2686623726195316 1.1938611884433805 1.4228067048843478 1.2968040051592622 1.1863739383157943 1.0 11.518492801257008 -10.524982913614348 0.739220415621946 0.9895826684706076 1.3059230845942167 0.3644821340214729 0.09689340018778739 0.3453380263577433 0.3239444159880437 0.0632670479953514 0.015939666605165638 2.98550007470962e-11 10.524982913614348 0.3163404161236091 TVSS(ph)DGCSTPSR ddPTM_A549_MK2206_60min_R1 1 TVSSDGCSTPSR 12 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.001)VS(0.131)S(0.86)DGCS(0.007)T(0.001)PSR 72.29 0.0020137 2995300.0 680.22 581.47 423.29 501.64 310.7 614.85 538.84 625.64 844.97 819.37 817.9 True False 795.0245062176913 611.064339340823 483.31888696402774 624.5418225194755 264.99644158180126 679.913018895602 636.7402531420651 714.3263859421432 653.585644139821 634.2737479228205 614.7928571083607 1.2931583329660639 0.9939353267943376 0.7861491580063039 1.0158573173035361 0.43103370268190044 1.1059221183758214 1.0356988468228674 1.1618976663163136 1.0630989553358179 1.0316869179419013 1.0 9.263956593134234 TVSS(ph)DGCSTPSR ddPTM_A549_PD325901_60min_R1 2 TVSSDGCSTPSR 12 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 TVS(0.019)S(0.981)DGCSTPSR;T(0.001)VS(0.108)S(0.89)DGCSTPSR 128.85 8.392099999999999e-08 5805800.0 1424.17 1753.0 1594.4 1445.7399999999998 1459.43 1320.27 1374.18 1251.55 1171.5900000000001 1733.19 1827.34 True False 1568.7506899814587 1900.7314621540359 1702.6055719060705 1535.0400762862319 1356.9246715601741 1309.5181588541232 1426.475171880149 1226.5868534280185 1122.3521466139732 1623.756087611945 1602.5887644626607 0.978885366457347 1.1860381804132645 1.0624095274229286 0.9578502672211873 0.8467079650437607 0.8171267563411363 0.8901068093775376 0.7653784181117022 0.7003369619843128 1.013208206383739 1.0 10.646188551960716 -6.467665471031755 2.338106726531482 0.8466840923371846 1.0897405949722323 0.4767886934100538 0.09733378317635497 0.21457516619578976 2.30052010201198 0.016944032945214134 0.044533924162833895 3.406705008169153e-07 6.467665471031755 0.24305650263504774 TVSS(ph)PIPYTPSPSSSR ddPTM_A549_MK2206_60min_R1 2 TVSSPIPYTPSPSSSR 16 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 TVS(0.071)S(0.929)PIPYTPSPSSSR;TVS(0.083)S(0.917)PIPYTPSPSSSR 220.52 2.4363e-47 23748000.0 5573.3 6478.8 6129.5 4861.3 7974.6 5871.6 5144.0 6041.8 7564.700000000001 7523.4 7276.299999999999 True False 6513.936785897292 6808.543246807784 6998.755268600742 6052.318718232051 6801.546903888742 6492.928814747359 6078.598214985495 6898.243652236493 5851.307528343617 5823.858714771774 5469.393894336187 1.190979642669872 1.2448441963301178 1.2796217284420273 1.1065794190649734 1.2435650156650926 1.187138637330745 1.1113842470333262 1.2612446251823162 1.069827414405629 1.0648087936768738 1.0 12.417165250388408 -9.010690981377882 0.709116802031204 1.0084109582861096 1.2131908837179308 0.543585853808759 0.06057952028830032 0.24185581015408703 0.2624343010981072 0.016858012659847006 0.014605155753850975 9.756836303481766e-10 9.010690981377882 0.20477992543182122 TVSS(ph)PPT(ph)SPRPGSAATVSASTSNIIPPR ddPTM_A549_MK2206_60min_R1 2 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 2 T(0.296)VS(0.095)S(0.61)PPT(0.59)S(0.41)PRPGSAATVSASTSNIIPPR;T(0.041)VS(0.103)S(0.856)PPT(0.767)S(0.233)PRPGSAATVSASTSNIIPPR 173.25 2.5458000000000004e-57 163361000.0 23484.8 25527.0 24062.7 19543.7 33123.0 23117.1 21777.1 25347.0 35033.0 32171.0 31130.0 True False 27448.460091766254 26826.215265367387 27475.152688108195 24331.90737735003 28250.65057777279 25563.336178110938 25733.71718265175 28940.01487193194 27098.08143620526 24903.54875627015 23399.561855707638 1.1730330790390848 1.1464409218766598 1.174173809643638 1.0398445717655596 1.2073153656456979 1.092470719569286 1.0997520954168962 1.2367759298395953 1.1580593518504483 1.0642741479450248 1.0 14.514193895917288 -10.638035828108661 0.898199813616545 0.999337297082645 1.1461535280164061 0.37524062621359355 0.05526785292584086 0.36630139615070806 0.5237551887269457 0.034874533359357696 0.009256646645845952 2.3012519625753697e-11 10.638035828108661 0.14681623093376117 TVSS(ph)PPT(ph)SPRPGSAATVSASTSNIIPPR ddPTM_A549_PD325901_60min_R1 1 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 2 T(0.07)VS(0.451)S(0.48)PPT(0.529)S(0.456)PRPGS(0.008)AAT(0.003)VS(0.001)ASTSNIIPPR 53.818999999999996 0.0034162 7905800.0 1644.5 1632.3 890.08 1861.8 1833.7 1519.9 1608.9 2018.4 1601.5 1817.6 1959.8 True False 1811.4484293830862 1769.8596495573474 950.486181285848 1976.7991575454143 1704.90723792158 1507.5224383212396 1670.1275699238608 1978.1414285958315 1534.194524366269 1702.8364258064432 1718.757024195783 1.0539293244376262 1.0297323150638327 0.5530078818037625 1.150132991293735 0.9919419754629463 0.8771003795761175 0.9717066149622421 1.1509139458041873 0.8926186207641118 0.9907371442471403 1.0 10.747149894187745 TVSS(ph)PPTS(ph)PRPGSAATVSASTSNIIPPR ddPTM_A549_PD325901_60min_R1 3 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 2 T(0.002)VS(0.112)S(0.887)PPT(0.016)S(0.984)PRPGSAATVSASTSNIIPPR;T(0.114)VS(0.09)S(0.796)PPT(0.245)S(0.755)PRPGSAATVSASTSNIIPPR;T(0.08)VS(0.439)S(0.473)PPT(0.208)S(0.794)PRPGS(0.001)AAT(0.001)VS(0.001)AS(0.001)T(0.001)S(0.001)NIIPPR 195.89 1.7387999999999998e-77 279349500.0 39680.2 43398.6 44384.2 41843.6 48814.2 43915.3 43888.1 48318.3 46820.5 47738.3 52453.9 True False 43708.50469298064 47055.95232939994 47396.378715876446 44428.18413828943 45385.658991847944 43557.66835687132 45558.28566198984 47354.553601526924 44852.79720767462 44724.095590930745 46002.40283266822 0.9501352538468146 1.0229020536288933 1.0303022406955298 0.9657796419872905 0.9865932255090315 0.9468563743357165 0.9903457831910686 1.029393046571439 0.9750098787410033 0.9722121636474673 1.0 15.48942159863734 -11.26473940576795 1.7767904544010769 1.0000336073310812 0.9875611806223468 0.0 0.02902344209765815 1.4604905998702864 8.306958963896006 0.020764823928782053 0.004167075631161998 5.4357640145319455e-12 11.26473940576795 -0.012472426708734385 TVSS(ph)PPTSPR ddPTM_A549_MK2206_60min_R1 1 TVSSPPTSPR 10 0 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 T(0.002)VS(0.108)S(0.889)PPT(0.001)SPR 112.83 0.0001236 27763000.0 5346.5 6220.9 6551.6 6288.6 8466.5 6710.6 5844.1 6839.0 9663.6 8361.1 9856.9 True False 6248.858490624926 6537.517238387751 7480.715395670876 7829.307282305986 7221.089065504727 7420.711237864238 6905.897322744313 7808.449193559104 7474.810029598183 6472.321702963861 7409.159693399442 0.8433963835590982 0.8823560982511678 1.0096577351862426 1.0567065100892397 0.9746164699267771 1.00155908968666 0.9320756480517666 1.0538913340625353 1.0088606993121265 0.8735567825228309 1.0 12.855094213845094 -5.6948848020824165 4.234353456393652 1.0045250579537526 0.8533399948879634 0.4658304780433783 0.05116295904806113 0.06998917365660816 2.412033047927891 0.004184113163037404 0.01759464779789899 2.01890181244187e-06 5.6948848020824165 -0.15118506306578916 TVSS(ph)PPTSPRPGSAATVSASTSNIIPPR ddPTM_A549_MK2206_60min_R1 3 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 TVS(0.009)S(0.99)PPTSPRPGSAATVSASTSNIIPPR;T(0.002)VS(0.014)S(0.98)PPT(0.004)S(0.001)PRPGSAATVSASTSNIIPPR;T(0.071)VS(0.253)S(0.355)PPT(0.145)S(0.145)PRPGS(0.011)AAT(0.011)VS(0.002)AS(0.002)T(0.002)S(0.001)NIIPPR 217.62 1.2372999999999998e-90 130899000.0 20343.5 23933.0 20635.3 20302.5 29777.0 24180.0 20468.3 21566.1 35821.0 32788.0 32761.0 True False 23776.985449177624 25151.08747389188 23561.695830680623 25276.613411413844 25396.842745353362 26738.711550615015 24187.12516403336 24623.160718411313 27707.600694382687 25381.168027745032 24625.539542397626 0.9655417055224698 1.0213415803779413 0.9567991714502178 1.0264389686932653 1.0313212712203843 1.08581221152857 0.9821967604969852 0.9999034001272452 1.1251571014993884 1.0306847484111545 1.0 14.587867713727157 -6.566935551349953 2.5449080604660037 1.0506114871458003 0.9852900320902307 0.19491134498343743 0.04266024443776076 0.33962188085754375 4.4216809528404 0.00784465982241313 0.01895503532647635 2.7105938501096144e-07 6.566935551349953 -0.06532145505556963 TVSS(ph)PPTSPRPGSAATVSASTSNIIPPR ddPTM_A549_PD325901_60min_R1 2 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 TVS(0.019)S(0.981)PPTSPRPGSAATVSASTSNIIPPR;T(0.001)VS(0.008)S(0.991)PPTSPRPGSAATVSASTSNIIPPR 335.3 5.823499999999997e-247 208210000.0 39619.0 38440.0 40402.0 43205.0 47901.0 42718.0 43449.0 44653.0 47956.0 46064.0 49328.0 True False 43641.09171403375 41679.47370519175 43143.92267696253 45873.674724325705 44536.59900947897 42370.11877110775 45102.4754712051 43762.360885399146 45940.576091482246 43155.5111786686 43260.96871595548 1.008786742631079 0.9634429126830799 0.9972944193699994 1.0603940708199306 1.0294868638263528 0.979407535908479 1.04256739527357 1.0115899431826347 1.061940531038975 0.9975622936698598 1.0 15.40077835058345 -6.016319230137201 23.400020273601918 1.0276897821498665 0.9846782798004642 0.22647056041842595 0.02656755656968247 282.85798355765894 405592.4375513576 0.003951888416768124 0.01080617635612597 9.631208170268964e-07 6.016319230137201 -0.04301150234940232 TVSTSS(ph)QPEENVDR ddPTM_A549_MK2206_60min_R1 2 TVSTSSQPEENVDR 14 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 TVSTS(0.008)S(0.992)QPEENVDR;TVSTS(0.26)S(0.739)QPEENVDR 263.59 1.9540999999999995e-83 14073500.0 2788.1 3124.6 2143.21 2148.15 3087.8 2173.7 2367.2 2176.1000000000004 3102.3999999999996 3598.0 3223.8 True False 3258.66311749955 3283.6287937543366 2447.149405207244 2674.4468464341194 2633.588710383925 2403.7194912147183 2797.289598466888 2484.5688390267524 2399.711353514775 2785.2093010804756 2423.241487646329 1.3447537664373095 1.3550563616933173 1.009866089567547 1.1036650123681169 1.0868040695943615 0.9919438501977068 1.1543585782628163 1.0253079817645372 0.9902898104660595 1.1493733972777604 1.0 11.242722468101656 -2.0000000340276554 0.4129247155248592 1.0006923525502234 8.061751828335245 0.5583461270927905 0.08425909380067455 22.505002529207296 0.25659362536512054 0.01444233660025283 132.10905590547304 0.00999999921648431 2.0000000340276554 7.061059475785021 TVSTSS(ph)QPEENVDR ddPTM_A549_PD325901_60min_R1 2 TVSTSSQPEENVDR 14 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 TVSTS(0.013)S(0.987)QPEENVDR;TVSTS(0.035)S(0.965)QPEENVDR 218.11 8.855599999999999e-39 17875400.0 3060.2 2576.6 2892.2 3002.9 3686.3999999999996 3367.5 3191.3 2856.0 3211.8999999999996 2806.6000000000004 3055.7 True False 3370.869251199828 2793.739124578488 3088.482084211451 3188.3823129192815 3427.479981389601 3340.0761964910675 3312.746667846366 2799.0348395113415 3076.915012683121 2629.390797022647 2679.8682716782605 1.2578488602683555 1.0424912127598407 1.152475335019843 1.1897533720650253 1.2789733053718908 1.2463583496958055 1.2361602631206074 1.0444673229249635 1.1481590513985267 0.9811641955729405 1.0 11.387946371737963 -10.151021973585324 0.49401336306416777 0.9868271972355928 1.1886783418964841 0.5043468001663785 0.0734692368717045 0.8182046074458289 0.35712826792548075 0.07466026492861617 0.020562528253774914 7.062818182887223e-11 10.151021973585324 0.20185114466089138 TVT(ph)PAS(ph)SAKT(ph)SPAK ddPTM_A549_PD325901_60min_R1 2 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 3 T(0.07)VT(0.931)PAS(0.898)S(0.101)AKT(0.555)S(0.445)PAK;T(0.374)VT(0.685)PAS(0.764)S(0.177)AKT(0.557)S(0.443)PAK 112.55 5.0708e-06 301790000.0 33337.0 34068.0 36411.0 35713.0 42344.0 38581.0 40123.0 39239.0 40950.0 38195.0 43270.0 True False 36721.34769859771 36939.02992165638 38882.06941712989 37918.91089989224 39369.90351886971 38266.809127489774 41649.90272114807 38456.34736259999 39229.01390746097 35783.36118160052 37948.064311129456 0.9676738027406586 0.9734101222871295 1.0246127206474274 0.999231754984966 1.0374680298863954 1.0083995013223068 1.0975501248144806 1.013394175979655 1.0337553342860715 0.9429561647260604 1.0 15.211738676785528 -5.743858640555261 6.906763353720622 1.0217806518802597 0.9699692290734766 0.20197335076869705 0.0351603559707255 0.12507525979464088 24.6454422735371 0.003631926012172621 0.013468202376900601 1.803604704501756e-06 5.743858640555261 -0.05181142280678308 TVT(ph)PAS(ph)SAKTS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 3 T(0.161)VT(0.841)PAS(0.463)S(0.463)AKT(0.35)S(0.722)PAK;T(0.022)VT(0.975)PAS(0.858)S(0.146)AKT(0.228)S(0.771)PAK 76.759 0.019508 104736100.0 5842.6 6021.5 5191.4 4662.0 7319.0 6168.0 3847.0 4545.7 6704.0 7659.5 7457.799999999999 True False 6828.688042144429 6327.9686300940075 5927.618582496762 5804.190209285135 6242.384795420676 6820.693666012967 4545.950103625429 5190.066895622402 5185.5547040881465 5929.213630246216 5605.822435191018 1.218142051606339 1.1288207400879586 1.057403913703303 1.035386025224211 1.1135537858340971 1.21671596716933 0.810933659811957 0.9258350501866282 0.925030138581521 1.0576884478225859 1.0 12.452710332292137 -7.752641475545986 24.99992337057516 0.9496973532004099 1.120237806186418 0.5873540034645657 0.07674355712813287 108.7581193740644 309043.6845006354 0.011354345057520148 0.016700109259843963 1.767496345245445e-08 7.752641475545986 0.17054045298600806 TVT(ph)PASS(ph)AKTS(ph)PAK ddPTM_A549_MK2206_60min_R1 1 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 3 T(0.387)VT(0.609)PAS(0.145)S(0.841)AKT(0.221)S(0.797)PAK 77.77600000000001 0.02576 6796100.0 1466.6 1364.5 1475.1 1410.6 1593.1 1171.7 993.56 1292.7 1935.5 2251.5 1612.5 True False 1714.126225072574 1433.9472217492787 1684.2913609124653 1756.1970633242397 1358.7571003668086 1295.6885162884869 1174.0769911510474 1475.9441837277154 1497.1123403583842 1742.8845862653395 1212.071747264008 1.4142118475592276 1.1830547366408852 1.3895970801352244 1.4489217055743422 1.1210203549698368 1.068986649687385 0.9686530469844499 1.2177036442432907 1.235168086161396 1.4379384637910484 1.0 10.243259384758725 -2.0000000000000004 0.08902105509594982 0.906171680288424 2.1502449192735935 0.0 0.16906192924451843 117.0022885816471 0.7277537254006216 1.3211018838318571 17.828480732252284 0.00999999999999999 2.0000000000000004 1.2440732389851696 TVT(ph)PASSAK ddPTM_A549_PD325901_60min_R1 1 TVTPASSAK 9 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.014)VT(0.985)PAS(0.001)SAK 96.626 0.00093888 65382000.0 7865.6 7191.2 7038.8 7691.5 8426.6 7926.0 9597.5 7965.5 8350.7 8496.2 8883.7 True False 8664.109921651325 7797.227661518597 7516.495295742882 8166.586486336097 7834.744686191842 7861.4532838569285 9962.738114453512 7806.62185368614 7999.749119341498 7959.74848202944 7791.0612184141655 1.1120577388319977 1.0007914766591561 0.9647588544135237 1.048199501633279 1.0056068700467184 1.009034977837986 1.278739549742799 1.0019972420746992 1.0267855552763594 1.0216513846941135 1.0 12.927604135448279 -4.1975531361913605 3.0048679739163875 1.0271784759273814 23.35683786065809 0.05882457267122998 0.08014533563700736 1377.68897534693 49.191643702386735 0.01077539420137987 210026.49225933215 6.34522262050975e-05 4.1975531361913605 22.329659384730707 TVT(ph)PASSAKT(ph)SPAK ddPTM_A549_MK2206_60min_R1 1 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 2 T(0.178)VT(0.393)PAS(0.195)S(0.224)AKT(0.604)S(0.406)PAK 44.577 0.014969999999999999 36051000.0 2411.5 2236.0 2129.7 2286.4 2863.8 2793.3 2582.7 2368.4 3544.1 3459.4 3325.5 True False 2818.5022444855513 2349.8028492718117 2431.723484058896 2846.5681026403972 2442.53881365292 3088.885151957526 3051.943158989705 2704.1279529208023 2741.367008764736 2677.9191373423555 2499.6865708691203 1.127542259630407 0.9400389939506715 0.9728113565907608 1.1387700105340284 0.9771380308706741 1.2357089836601178 1.220930333649218 1.0817868065677527 1.096684296628271 1.0713019658345666 1.0 11.287531495149208 -4.926840843012159 20.485822196230327 1.0626757182689288 3.174220179407174 0.01504969099824327 0.09377532045370869 1418.5363690612871 420040.2817966 0.013070594907981292 7869.2301717152595 1.1834751873829309e-05 4.926840843012159 2.1115444611382452 TVT(ph)PASSAKTS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 2 T(0.293)VT(0.677)PAS(0.019)S(0.029)AKT(0.305)S(0.677)PAK 51.733000000000004 0.012376 50699000.0 7675.1 7624.4 8710.1 9929.8 10253.0 12836.0 11420.0 10944.0 10672.0 11005.0 10317.0 True False 8454.270501890005 8266.934945834131 9301.219764086218 10543.141193787967 9532.864650929785 12731.467871762228 11854.594349263785 10725.713334598084 10223.492952879691 10310.14242187495 9048.07440485146 0.9343723452756904 0.9136678784826866 1.0279778158211237 1.1652359078894037 1.0535793832352203 1.407091421013932 1.310178698675102 1.185413918440712 1.129908143482771 1.1394847080774209 1.0 13.143395077724222 -5.9662325369646165 3.3782629045068497 1.1187854624255427 0.9247196584550058 0.36404137362884803 0.11517518976447039 0.26279559264219743 6.223284305947186 0.01928400882139595 0.06596235717901058 1.0808550674599148e-06 5.9662325369646165 -0.19406580397053685 TVTAMDVVYALK ddPTM_A549_MK2206_60min_R1 2 TVTAMDVVYALK 12 0 P62805 P62805 HIST1H4A Histone H4 0 ; 160.77 3.2693e-14 21263000.0 12130.8 13467.0 11786.0 11514.2 17360.6 14398.599999999999 14651.1 14560.8 18541.0 14838.8 15490.599999999999 False True 14178.18247041482 14152.412777792244 13457.432024753789 14335.179516892078 14806.87873744775 15922.250294982856 17313.01522308982 16624.837990579814 14341.493103892954 11486.704774005822 11643.856501189357 1.2176534869668478 1.2154403290994398 1.1557538538352121 1.2311367385391443 1.2716473048199544 1.3674378667717593 1.4868798169508006 1.4277776429898184 1.231678963273727 0.9865034641085209 1.0 13.507281344468165 -10.048689651369266 0.9476393834578711 1.0246330790063447 1.2905763345710501 0.5729722667200652 0.09721575052334108 0.31437062705375185 0.5684207199165229 0.04369409654195045 0.02156214814401821 8.93944071663613e-11 10.048689651369266 0.26594325556470544 TVTAMDVVYALK ddPTM_A549_PD325901_60min_R1 2 TVTAMDVVYALK 12 0 P62805 P62805 HIST1H4A Histone H4 0 ; 147.3 3.6177e-12 40784000.0 14969.7 15285.300000000001 15960.6 17132.4 20233.6 17466.6 16857.7 17536.1 18111.5 18708.0 18047.4 False True 16489.41292388932 16573.445874765017 17043.78229488461 18190.62943749653 18812.461738130594 17324.357800632777 17499.228998387392 17186.328728695673 17350.33663943782 17526.77368727275 15827.684211894562 1.0418083089816428 1.0471175475127317 1.0768336079182164 1.149291911183457 1.1885795474737209 1.0945604908906041 1.1056089295259415 1.0858397538523092 1.0962018452705153 1.1073492149976885 1.0 13.95016256614161 -10.514683762478333 0.6568770696117626 0.9935777649076768 1.1016751413846726 0.0 0.050473702511184125 0.6711468564775758 0.47690066163304784 0.03977953226067603 0.009089006047366347 3.057146406282506e-11 10.514683762478333 0.1080973764769958 TVTAMDVVYALKR ddPTM_A549_MK2206_60min_R1 2 TVTAMDVVYALKR 13 1 P62805 P62805 HIST1H4A Histone H4 0 ; 80.69 0.00048542 11574000.0 1838.71 2307.42 2806.0 2577.9 3904.6 2652.5 2290.59 2021.8999999999999 4218.1 3630.3 3211.8 False True 2149.039295856533 2424.857822212326 3203.9329935057804 3209.4856157263284 3330.2385123923436 2933.1857894130007 2706.7605531227878 2308.5105168090586 3262.707084921572 2810.2127086471505 2414.2214188294834 0.8901583256180695 1.0044057281987 1.3271081801018825 1.3294081440477084 1.3794254687736902 1.2149613811458657 1.1211732826209204 0.956213253185502 1.351453126657898 1.164024429047465 1.0 11.237342282709534 -11.145564949302614 1.5238599353792512 1.0000815437494646 1.202706426902551 0.0 0.16878708934226358 0.6221039128212511 2.5908718686115044 0.12595793710314324 0.026966054975891728 7.152124251317719e-12 11.145564949302614 0.20262488315308635 TVTAMDVVYALKR ddPTM_A549_PD325901_60min_R1 6 TVTAMDVVYALKR 13 1 P62805 P62805 HIST1H4A Histone H4 0 ;;;;; 192.15 7.974599999999999e-26 57196100.0 11396.0 12196.3 13705.64 14133.300000000001 15586.9 20541.5 16962.3 18061.6 18046.5 16153.8 16766.199999999997 False True 12552.913530708203 13224.125003918576 14635.787149108583 15006.281841946815 14492.129915885842 20374.21683451262 17607.809608626714 17701.34721894891 17288.068363394246 15133.846311175239 14704.063689698614 0.8537036968564367 0.899351722284986 0.9953566209973733 1.0205533761704209 0.9855867209034704 1.3856181028912713 1.1974791445552844 1.2038404887589094 1.1757340506832772 1.0292288329638917 1.0 13.843927300242608 -6.1917261679282145 1.211109886446419 1.1199587891037597 0.8649576040666699 0.47416455085353126 0.1076713863022877 0.45928846413899815 1.1645477209245731 0.01853778891198317 0.0950344231504894 6.430930736142435e-07 6.1917261679282145 -0.2550011850370898 TVTCVTVVEPEAPPS(ph)PDVLQAATHR ddPTM_A549_MK2206_60min_R1 2 TVTCVTVVEPEAPPSPDVLQAATHR 25 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR 142.22 1.8239e-32 136806000.0 5460.9 6964.799999999999 6101.700000000001 5832.6 7789.4 6402.9 6172.700000000001 6586.7 9201.9 8655.0 9164.400000000001 True False 6382.56641381346 7319.2785709339505 6967.012810575274 7261.587261835362 6643.589578555786 7080.450628098963 7294.199689277018 7520.384895922756 7117.684342414784 6699.829488841445 6888.626555427143 0.9265368593373684 1.0625163829163482 1.0113790832639018 1.054141519126826 0.9644287616842421 1.0278464903168096 1.0588757614578987 1.091710348269335 1.0332515901601864 0.9725929305259035 1.0 12.75000065377575 TVTCVTVVEPEAPPS(ph)PDVLQAATHR ddPTM_A549_PD325901_60min_R1 4 TVTCVTVVEPEAPPSPDVLQAATHR 25 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR 150.24 5.8288e-33 253208400.0 9694.9 9787.999999999998 9983.900000000001 10088.7 12469.3 11127.3 10252.2 12493.8 11384.699999999999 13218.0 13082.9 True False 10679.11911099184 10612.86911098898 10661.467492067875 10711.856085899886 11593.499384749712 11036.682958044554 10642.353081219098 12244.601357803507 10906.2406503607 12383.413224202004 11473.786239336161 0.9307406368074103 0.9249666055834599 0.929202206636605 0.9335938340193134 1.0104336217283822 0.9619041812202267 0.9275362865601751 1.0671805367808511 0.950535457334065 1.079278711132627 1.0 13.486053924987479 -6.658676148507124 7.809763672009885 0.9801108715667245 0.9286469247652743 0.30159471880322786 0.045453641861942166 0.21740929400946715 14.820540412510974 0.004907771646154336 0.010238623806684133 2.1944407102051774e-07 6.658676148507124 -0.05146394680145017 TVTNAVVTVPAYFNDSQR ddPTM_A549_MK2206_60min_R1 1 TVTNAVVTVPAYFNDSQR 18 0 P11142;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 174.83 4.6719999999999996e-30 5994200.0 1161.1 1441.5 1071.3 1375.8 2193.0 1408.9 994.22 1074.9 2171.2 2165.0 2128.4 False True 1357.0652938304681 1514.866192855686 1223.2264490173707 1712.871061762009 1870.412605049533 1557.9888628478707 1174.856904607869 1227.2703667431902 1679.4266666939404 1675.9249963421987 1599.8595391483498 0.8482402739885979 0.9468744947835183 0.7645836519301742 1.0706384028399258 1.1691105120673322 0.9738285297703272 0.7343500325242792 0.7671113224080288 1.0497338207502556 1.0475450846355805 1.0 10.64372953285634 -2.0000000568223695 0.1044933291161063 1.0628583417244066 0.5429260573741324 0.04790198385531519 0.13457481695550377 226.832043635548 1.6149228067837855 0.8353026378562105 17.025996587945706 0.009999998691616677 2.0000000568223695 -0.5199322843502743 TVTNAVVTVPAYFNDSQR ddPTM_A549_PD325901_60min_R1 3 TVTNAVVTVPAYFNDSQR 18 0 P11142;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PI65 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ;; 178.03 4.5431999999999995e-31 12601300.0 3838.1 4262.3 4457.9 3893.1000000000004 4582.0 4449.5 4333.9 4763.9 4694.8 4865.3 4833.3 False True 4227.741086540114 4621.498979543153 4760.439901530402 4133.567945128396 4260.176127041869 4413.2647472270255 4498.828936101076 4668.88027729275 4497.493882606781 4558.104127682709 4238.834740813084 0.9973828528472328 1.0902758097751806 1.1230539033982874 0.9751661005626995 1.0050347294796145 1.0411504616432588 1.0613362424311263 1.1014537161213263 1.0610212847656528 1.075320083558715 1.0 12.049452005889497 -10.71554030131354 1.0576716079016786 1.001032506142916 1.0519640941243509 0.0 0.048233723989409345 0.7527085800705879 1.5419528330549168 0.02710430665287593 0.007646107438089767 1.9251283902569332e-11 10.71554030131354 0.050931587981434934 TVTPAS(ph)SAK ddPTM_A549_MK2206_60min_R1 1 TVTPASSAK 9 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 TVTPAS(0.632)S(0.368)AK 110.46 0.00036082 8332300.0 4208.1 4516.1 3923.3 4708.2 6460.0 4447.4 4051.9 4684.5 6845.6 5824.8 6281.3 True False 4918.3244018327405 4745.950200177291 4479.682934219966 5861.709211359126 5509.742557510256 4918.020916054811 4788.0777813568675 5348.542220679571 5295.08253017688 4508.973634500709 4721.479854939168 1.0416912817466863 1.0051827702309317 0.9487878952895973 1.2414982995696058 1.1669524654958512 1.04162700406527 1.014105307756006 1.1328105562251694 1.1214879005864364 0.9549916070877321 1.0 12.205023399495682 -10.978617782963733 1.273199825893156 1.0003772441253556 1.0834206705423404 0.17814883006821058 0.0802674294714092 0.8024399911441319 2.331106311377582 0.05691184194119033 0.013359480973542743 1.0504665241447939e-11 10.978617782963733 0.08304342641698481 TVTPASS(ph)AK ddPTM_A549_PD325901_60min_R1 2 TVTPASSAK 9 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 TVTPAS(0.021)S(0.978)AK;TVTPAS(0.193)S(0.807)AK 130.98 4.9063e-05 17832700.0 7879.200000000001 8388.9 8219.900000000001 8746.8 8719.4 8781.099999999999 8859.9 8364.6 9948.3 9690.5 10214.3 True False 8679.090583639525 9095.86204384711 8777.751844274157 9287.069970575902 8106.9794242970065 8709.589632964426 9197.06834282331 8197.761491098245 9530.207547145146 9078.640176208923 8958.005853782523 0.968864133971823 1.015389160524647 0.9798778866133188 1.0367340814646189 0.9049982280234646 0.9722688034733531 1.0266870208551877 0.9151324105952371 1.0638760124409845 1.0134666492069173 1.0 13.128961893613038 -8.786433778957266 24.999951256609485 1.0301636663136386 0.9798603077942866 0.20793887796054467 0.04154671188377653 246.50386229096006 246557.4373464775 0.007362429495000906 0.007839408461306303 1.6351824640666775e-09 8.786433778957266 -0.05030335851935208 TVTPASS(ph)AKTS(ph)PAK ddPTM_A549_PD325901_60min_R1 1 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 2 TVT(0.006)PAS(0.439)S(0.554)AKT(0.206)S(0.795)PAK 72.891 0.00070251 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TVVRQS(ph)PR ddPTM_A549_MK2206_60min_R1 3 TVVRQSPR 8 1 Q03164-2;Q03164;Q03164-3;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 TVVRQS(1)PR;TVVRQS(1)PR;TVVRQS(1)PR 73.84100000000001 0.0014322 103098500.0 3749.09 4117.04 3622.68 3116.6000000000004 3912.6000000000004 3457.3999999999996 3464.42 3554.04 5072.0 5412.200000000001 5079.200000000001 True False 4381.844735549799 4326.579750700365 4136.430497830905 3880.167139909493 3337.061722989878 3823.259773163624 4093.8602698211585 4057.8360537910216 3923.200098319672 4189.580261063854 3817.8944612113796 1.1477123791838615 1.133237127075426 1.0834323839633997 1.016310738636383 0.8740581377755167 1.0014053065129889 1.072282199367611 1.0628465755188818 1.0275821236490859 1.0973536077617352 1.0 11.89856150725951 -6.029433742046774 2.6717918675107373 1.0106298899136095 1.1405361773043465 0.42369243870399464 0.0550524900450019 0.1720172681606897 2.419021591639359 0.0072186620713107245 0.025310559593153432 9.344719246949111e-07 6.029433742046774 0.12990628739073706 TVVRQS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TVVRQSPR 8 1 Q03164-2;Q03164;Q03164-3;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 TVVRQS(1)PR;TVVRQS(1)PR 93.561 0.00071299 130258000.0 3925.9 3595.3700000000003 3452.3999999999996 3591.75 4387.6 3338.6099999999997 4069.1 4125.6 3932.7000000000003 3825.3 4046.4 True False 4324.454477905173 3898.3644478521105 3686.700624967712 3813.604240043905 4079.4301123982777 3311.4214670726165 4223.951827196958 4043.311671529409 3767.4222953326425 3583.7699051702166 3548.7184522429948 1.2185961033825798 1.0985273980775 1.0388822541381113 1.0746426608268929 1.1495502298357432 0.9331316393893145 1.1902752737476756 1.1393723469309893 1.0616289643804835 1.0098772143800439 1.0 11.793082403252152 -14.99999999734186 0.11294736487922022 0.6650246577565013 1.15084389524265 0.2089894786965132 0.07339536938006302 100.22692616862585 0.7978746858520315 7.612622165869818 0.3342124277779616 1.0000000061205943e-15 14.99999999734186 0.48581923748614875 TVYLQSALSSSTSAEKFPS(ph)PHPS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 TVYLQSALSSSTSAEKFPSPHPSPAK 26 1 O14681-3;O14681;B7ZB74 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 2 T(0.003)VY(0.003)LQS(0.004)ALS(0.01)S(0.011)S(0.011)T(0.011)S(0.011)AEKFPS(0.959)PHPS(0.977)PAK;TVYLQSALS(0.001)S(0.004)S(0.005)T(0.005)S(0.005)AEKFPS(0.982)PHPS(0.997)PAK 85.412 2.4205e-06 14140600.0 3664.3 4452.4 4019.2 4177.200000000001 4570.7 5518.200000000001 4266.7 5882.2 4684.8 4762.200000000001 4583.0 True False 4036.297038484914 4827.61937369916 4291.967081412994 4435.216156890486 4249.669800058984 5473.261608753382 4429.071603327829 5764.874906503368 4487.9141478308475 4461.513879277864 4019.320054030652 1.0042238448857133 1.2011034973086878 1.067834117143502 1.103474243720095 1.0573106254122093 1.3617381883447397 1.1019454892342475 1.4342910813291019 1.1165854143240672 1.1100170723662008 1.0 11.972735746850587 -9.798411521058767 1.321628542706899 1.0231253772686795 1.163801987814396 0.08104043454211407 0.12723742429008875 0.45969948980339187 1.6205744422259636 0.03336514044853195 0.022514199697878327 1.5907007247346153e-10 9.798411521058767 0.14067661054571645 TVYS(ph)ILR ddPTM_A549_PD325901_60min_R1 1 TVYSILR 7 0 P05198;H0YJS4;G3V4T5 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 1 T(0.001)VY(0.001)S(0.997)ILR 63.419 0.026542000000000003 2513700.0 356.59 431.77 640.19 338.08 384.95 320.97 366.46 470.16 456.72 540.81 513.63 True False 392.7907542923162 468.1567731969465 683.6371431752053 358.96243376461126 357.9124400054056 318.35612673726433 380.4058358346064 460.7822899666152 437.52564668658266 506.6631643047882 450.4567661688335 0.8719832485435377 1.039293464672876 1.5176531789933745 0.7968854299106484 0.7945544764472651 0.706740692219823 0.8444891150597755 1.0229223414393374 0.9712933172427825 1.1247764543842778 1.0 8.815244835820312 TWS(ph)EKDLR ddPTM_A549_PD325901_60min_R1 1 TWSEKDLR 8 1 E9PKA1;F5H4Y5;E9PQK4;E9PSH0;F5H0D8;E9PKU1;G5EA30;Q92879-5;Q92879-2;Q92879-3;Q92879-6;Q92879;Q92879-4 E9PKA1 CELF1 CUGBP Elav-like family member 1 1 T(0.124)WS(0.876)EKDLR 77.37899999999999 0.0012485999999999999 5948500.0 1693.6 1424.1 1530.3 1839.6 1542.6 1693.9 1528.9 1457.1 2151.0 1893.2 2305.2 True False 1865.5330252375757 1544.1139048793843 1634.1553604414576 1953.227913965272 1434.253097681098 1680.1054400107541 1587.0831261461815 1428.0369974271625 2060.6009503039945 1773.6630289044672 2021.6750138667824 0.9227660293775112 0.7637794869542436 0.8083175333486808 0.9661433714954045 0.7094380094938483 0.8310462505035758 0.7850337543177263 0.7063632817501214 1.019254299613052 0.8773235147779999 1.0 10.981335385975596 -8.779611857325198 24.998080466869972 1.0090923388016066 0.8114140539589366 0.3688939102800034 0.08457604090557458 111.11932812768488 152855.2480735076 0.01219756847392968 0.012997569790350083 1.6610707955951015e-09 8.779611857325198 -0.19767828484267003 TWSAPYDGERPS(ph)PEPSPFGSR ddPTM_A549_MK2206_60min_R1 2 TWSAPYDGERPSPEPSPFGSR 21 1 Q8N612;Q8N612-2;E9PJK5;Q8N612-3 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 T(0.001)WS(0.004)APY(0.003)DGERPS(0.99)PEPS(0.001)PFGS(0.001)R;TWSAPYDGERPS(0.996)PEPS(0.003)PFGSR 86.006 6.1616e-06 4706100.0 2476.2 3327.6 3077.1000000000004 2928.3999999999996 4393.4 2697.5 2687.0 2787.4 5020.6 4057.5 4553.2 True False 2894.122022722424 3496.960626671234 3513.479050005931 3645.8581314608714 3747.1366799017856 2982.947659544419 3175.193118908636 3182.5224860544863 3883.442116250737 3140.9079319438647 3422.5147780728535 0.845612717661381 1.0217517975598924 1.026578196978392 1.0652570895585083 1.0948489408749082 0.8715660422141565 0.9277368615765396 0.9298783766965933 1.1346750468780802 0.9177193191587749 1.0 11.740841055570066 -8.75207340834216 24.99645647885339 1.0635965522758835 0.9785809700259951 0.0 0.09028496597141714 266.1926798555231 710430.0985202981 0.014961629436153277 0.01685243019632594 1.7698097839363763e-09 8.75207340834216 -0.08501558224988837 TWSAPYDGERPS(ph)PEPSPFGSR ddPTM_A549_PD325901_60min_R1 2 TWSAPYDGERPSPEPSPFGSR 21 1 Q8N612;Q8N612-2;E9PJK5;Q8N612-3 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 TWSAPYDGERPS(0.952)PEPS(0.047)PFGS(0.001)R;TWSAPYDGERPS(0.998)PEPS(0.002)PFGSR 135.72 2.4346e-18 16120900.0 3899.0 4287.1 3752.6000000000004 4057.6000000000004 4345.2 4094.8 3384.1000000000004 3195.1 4294.9 4197.299999999999 4940.4 True False 4294.823609707903 4648.38896257876 4007.2740022169587 4308.2287365217935 4040.0081421262166 4061.4533064266125 3512.8837773505734 3131.3712239925385 4114.400288917073 3932.281761684302 4332.762119775919 0.9912438049864649 1.0728465662497908 0.924877454944193 0.9943377036227887 0.932432483123527 0.9373820196333931 0.8107723618882294 0.722719396409994 0.9496021648956489 0.9075692717438342 1.0 12.081071315631338 -5.771129765603518 24.943021666038156 0.9409674496918782 1.032045189158072 0.17028135004392175 0.08300071246722011 270.8680502807091 697220.8632390968 0.01288597880687334 0.04080059813011069 1.6938316141337178e-06 5.771129765603518 0.0910777394661938 TYAENLS(ph)PHEGR ddPTM_A549_MK2206_60min_R1 1 TYAENLSPHEGR 12 0 E9PQ01 E9PQ01 PCF11 1 TYAENLS(1)PHEGR 69.594 0.0010877 2995800.0 669.46 770.85 995.3 885.31 956.24 848.53 793.42 821.29 1169.9 1079.6 1058.9 True False 782.448481274434 810.0829724334412 1136.4485062139352 1102.2109897430767 815.5783627234681 938.320881391372 937.57414380517 937.7103725951384 904.919517946409 835.7176101852366 795.9459058467335 0.9830422840633362 1.0177613409188513 1.4277961578368474 1.3847812792887426 1.0246655667583962 1.1788751905108161 1.17793701420924 1.1781081675363287 1.1369108268529236 1.0499678483755672 1.0 9.636526575294244 -10.115460893008853 0.5601027023018799 0.9928182394975056 1.1814046193955172 0.1437882780903592 0.1331319359672954 1.2219475455649713 0.7151887571455163 0.10883495090611518 0.033727481960054845 7.665475624972996e-11 10.115460893008853 0.18858637989801164 TYAENLS(ph)PHEGR ddPTM_A549_PD325901_60min_R1 1 TYAENLSPHEGR 12 0 E9PQ01 E9PQ01 PCF11 1 TYAENLS(1)PHEGR 49.595 0.009487 5076100.0 1441.5 1780.2 1725.0 1690.2 2337.8 1791.9 1765.8 1861.1 1998.4 2148.7 1849.3 True False 1587.840018823786 1930.223701612443 1842.0688732676688 1794.5998152772897 2173.600992972171 1777.3073605025513 1832.998485282837 1823.9789004952936 1914.4141976231992 2013.0307153005642 1621.8478236785704 0.9790314452698465 1.1901386020511062 1.1357840398919838 1.1065155368318678 1.34020033275511 1.0958533436702944 1.1301914140904714 1.1246301125578246 1.1803907676621896 1.2411958051247607 1.0 10.663422743968358 -10.828266879602118 0.9226399408378232 0.9940530122231049 1.148432958910574 0.0 0.1084453361159925 0.598930374544231 0.8462075595695508 0.06515307735018186 0.013766459841203997 1.485022796034041e-11 10.828266879602118 0.15437994668746902 TYEEGLKHEANNPQLK ddPTM_A549_PD325901_60min_R1 1 TYEEGLKHEANNPQLK 16 1 P31948;P31948-2;F5H783;F5GXD8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 129.93 1.7226e-09 6369100.0 1620.7 1654.1 1559.7 2189.2 2303.4 1650.0 1412.4 2073.2 2299.4 1974.2 2301.0 False True 1785.2322709037205 1793.496812064454 1665.5506212380205 2324.4219119660647 2141.617130298613 1636.562947055756 1466.149654894937 2031.8483996060634 2202.7642143788935 1849.5486750809212 2017.991587240788 0.8846579352417813 0.8887533641885559 0.8253506267166049 1.1518491586698143 1.0612616741514067 0.8109860107461787 0.7265390322561315 1.006866635348179 1.0915626350012422 0.916529427959519 1.0 10.978704444700364 -8.506112396858764 24.766282568630213 1.0435524837935493 0.9114214242105115 0.10841822938111345 0.11812986874167607 776.5728817495849 1147110.3888154952 0.01971477434275771 0.02353191376961269 3.118082509520322e-09 8.506112396858764 -0.13213105958303772 TYFPHFDLHPGS(ph)AQLR ddPTM_A549_MK2206_60min_R1 1 TYFPHFDLHPGSAQLR 16 0 P02008 P02008 HBZ Hemoglobin subunit zeta 1 T(0.002)Y(0.002)FPHFDLHPGS(0.996)AQLR 45.115 0.044797000000000003 5206300.0 1589.1 1887.5 1793.2 1279.9 2253.6 2130.0 2306.3 2630.4 2735.0 2448.0 2635.4 True False 1857.3012302351183 1983.5656878356635 2047.502724146317 1593.4755574568937 1922.0984253258684 2355.395186220431 2725.3248567692567 3003.2672552621502 2115.526866897536 1894.995099790161 1980.9574466601957 0.9375775503741607 1.001316656841804 1.033592482058771 0.8043966618987304 0.9702875892495516 1.1890185678604657 1.3757614336259623 1.5160685356091432 1.0679315047701898 0.9566056570195572 1.0 10.951982174404032 -7.150313062172025 6.559071978202675 1.1114352914612144 0.947039371185828 0.2779353565832803 0.16758430570307034 0.3879580355000331 20.258763465824664 0.028342652643435187 0.049358073851346634 7.074356439339723e-08 7.150313062172025 -0.1643959202753864 TYGGDTGS(ph)PEISFTK ddPTM_A549_MK2206_60min_R1 2 TYGGDTGSPEISFTK 15 0 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 TYGGDT(0.001)GS(0.996)PEIS(0.004)FTK;TYGGDT(0.004)GS(0.995)PEISFTK 132.08 2.2464e-09 13246300.0 4477.0 4946.7 5377.799999999999 5102.1 6748.6 5349.8 4760.6 5731.5 7498.7 8651.1 7839.3 True False 5232.608147858931 5198.465900935986 6140.452905372556 6352.114729041972 5755.889879816359 5915.912285090167 5625.539397795484 6543.9576769825935 5800.256422963275 6696.810501550107 5892.585456326654 0.8879986869330628 0.8822045839580626 1.0420642943378575 1.0779843204856603 0.9768021053706519 1.003958674666053 0.9546810036934716 1.1105409884139372 0.9843313204284125 1.136480845493719 1.0 12.524685060755212 -5.751520091419808 24.987915591660492 1.005667083653491 0.885101558078432 0.4295480248341069 0.059241512685195855 114.56142469155132 288588.33598754817 0.005915198425740785 0.02236946377949121 1.7720660635575226e-06 5.751520091419808 -0.12056552557505884 TYGGDTGS(ph)PEISFTK ddPTM_A549_PD325901_60min_R1 2 TYGGDTGSPEISFTK 15 0 H0Y9X0;A0A2C9F2R7;O94915;A0A286YEZ9 H0Y9X0 FRYL Protein furry homolog-like 1 TYGGDT(0.004)GS(0.996)PEISFTK;TYGGDTGS(0.909)PEIS(0.089)FT(0.002)K 270.97 6.680799999999999e-91 33718000.0 13822.0 15090.199999999999 14281.5 13750.3 17881.2 16707.0 15388.7 16842.9 15513.9 16507.3 17562.300000000003 True False 15225.199264781399 16361.904113061504 15250.728471636065 14599.624801802922 16625.286198791153 16570.943731188192 15974.325399519746 16506.95514650057 14861.904734040494 15465.026260846553 15402.248436592317 0.9885049788321626 1.0623062068125884 0.9901624775382616 0.9478891904585476 1.0794064429770636 1.0758782264425313 1.037142431852242 1.0717237301070743 0.9649178686620787 1.0040758870052433 1.0 13.910853351998371 -8.778064086590248 24.982996626796588 0.983433437141875 1.031727539830564 0.1679542910731816 0.04095978055781376 269.78974778249756 405428.7543698184 0.007302711238446723 0.007784710087873556 1.6670012036555414e-09 8.778064086590248 0.048294102688689056 TYIPPKGETK ddPTM_A549_MK2206_60min_R1 2 TYIPPKGETK 10 1 Q5T7C4;P09429;B2RPK0 Q5T7C4 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 0 ; 47.938 0.032510000000000004 6805600.0 3272.8 3634.2 3700.0 4093.5 5262.4 3371.5 3954.1 3868.5 5372.4 4959.0 5228.1 False True 3825.168627722294 3819.1652570767505 4224.7156364830325 5096.4076837642 4488.307931059126 3728.2698921794254 4672.508787300571 4416.87172178438 4155.559977959898 3838.7584558249237 3929.8184817804413 0.9733703084396064 0.9718426626530704 1.0750409099223803 1.2968557472545714 1.1421158386495387 0.9487130027670636 1.1889884504751087 1.123937846560097 1.0574432374487643 0.9768284396906134 1.0 11.940246960636273 -9.600961062017833 1.0969693738272226 1.0114368704419545 1.0914007247883923 0.12124504880371012 0.0983816987063314 0.7736530901799885 1.9268633795083192 0.028542709254119204 0.02011234444064476 2.506333955891909e-10 9.600961062017833 0.07996385434643782 TYIPPKGETK ddPTM_A549_PD325901_60min_R1 2 TYIPPKGETK 10 1 Q5T7C4;P09429;B2RPK0 Q5T7C4 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 0 ; 75.294 0.0015710000000000001 7130000.0 4305.200000000001 4339.299999999999 4401.9 4431.7 5319.0 4196.4 5008.1 5124.200000000001 4819.8 4662.3 5299.1 False True 4742.260734679272 4704.9880397746765 4700.639404775046 4705.436043879047 4945.411789553845 4162.225909711986 5198.6859860374725 5021.993811142868 4617.24056730599 4367.921582326907 4647.344293762565 1.0204238022657584 1.0124035884514686 1.0114678637182124 1.012499988476096 1.0641371667236557 0.8956138488164777 1.1186358611336136 1.0806158299661894 0.9935223808365181 0.9398747556081254 1.0 12.18219081406081 TYQVPPVQPAS(ph)PGSHNALK ddPTM_A549_MK2206_60min_R1 2 TYQVPPVQPASPGSHNALK 19 0 A2RRE0;Q9Y4E6-2;Q9Y4E6;K7EPQ4 A2RRE0 WDR7 WD repeat-containing protein 7 1 TYQVPPVQPAS(0.994)PGS(0.006)HNALK;TYQVPPVQPAS(0.984)PGS(0.016)HNALK 84.32700000000001 3.1887e-05 13954700.0 7250.5 7944.7 7355.200000000001 6834.6 8732.5 6975.2 6722.9 6513.799999999999 10231.599999999999 9421.9 11506.400000000001 True False 8474.207142294215 8349.051295442647 8398.27795931352 8509.077306816855 7447.960817872803 7713.31103423697 7944.363907372862 7437.151097675864 7914.158936507797 7293.4862462062565 8649.043319515393 0.9797854894741153 0.9653150050253703 0.9710065783072153 0.9838171682661453 0.8611311728624934 0.8918108915968694 0.9185251609790741 0.8598813559986388 0.9150328705893485 0.8432708655475796 1.0 13.0783248481027 TYQVPPVQPAS(ph)PGSHNALK ddPTM_A549_PD325901_60min_R1 3 TYQVPPVQPASPGSHNALK 19 0 A2RRE0;Q9Y4E6-2;Q9Y4E6;K7EPQ4 A2RRE0 WDR7 WD repeat-containing protein 7 1 TYQVPPVQPAS(0.999)PGS(0.001)HNALK;T(0.002)Y(0.002)QVPPVQPAS(0.962)PGS(0.035)HNALK;TYQVPPVQPAS(0.999)PGS(0.001)HNALK 112.45 7.2421e-11 17620700.0 4726.7 4615.1 5253.6 4592.5 6430.8 5326.3 4991.3 5539.799999999999 5499.1 6189.7 5747.0 True False 5206.551104387367 5004.030673694857 5610.140888463206 4876.16829467575 5979.122793055618 5282.924378729134 5181.246652844164 5429.30434311097 5267.991950635373 5798.881285659187 5040.155433234599 1.0330139959683706 0.9928326100219973 1.1130888645755137 0.9674638727453675 1.1862973021882426 1.0481669561009421 1.0279934262898351 1.0772097041512525 1.045204264118211 1.150536201209506 1.0 12.299252510311684 -10.148272998792601 0.730543389524621 1.001305693180184 1.0559662480549612 0.0 0.07110531645398824 1.0352468553003775 1.0721322281505203 0.029145575514317897 0.010822633492296204 7.107665832259993e-11 10.148272998792601 0.05466055487477717 TYQVTPMT(ph)PR ddPTM_A549_PD325901_60min_R1 2 TYQVTPMTPR 10 0 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 TYQVT(0.019)PMT(0.981)PR;TYQVT(0.017)PMT(0.982)PR 56.02 0.0075671 26586000.0 10368.3 10943.900000000001 9390.9 10572.7 12640.0 12109.5 11045.6 12109.900000000001 12935.6 12898.3 13395.9 True False 11420.882183260954 11866.180860620387 10028.222946069185 11225.751666656131 11752.210005632747 12010.884246891923 11465.94635238424 11868.358544467226 12391.961716760738 12083.899136762353 11748.28922360664 0.9721315134387563 1.010034791855214 0.8535900636425252 0.9555222426852977 1.000333732167423 1.0223517669923918 0.9759673203605621 1.010220153638993 1.0547886148274868 1.0285667050553495 1.0 13.520163067547086 -6.831294026948142 3.3470149834492418 1.0204878572953386 0.9448186994950218 0.3894213708101506 0.03946371816553247 0.18459077006057348 4.160662341613632 0.006075571567141324 0.012347047370866787 1.474707785512659e-07 6.831294026948142 -0.0756691578003168 TYS(ph)APAINAIQGGSFES(ph)PKK ddPTM_A549_MK2206_60min_R1 1 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 2 T(0.352)Y(0.018)S(0.631)APAINAIQGGS(0.454)FES(0.546)PKK 41.93899999999999 0.01896 1629100.0 1103.4 1006.7 1125.1 910.01 1691.8 678.67 914.98 893.86 1753.0 1194.9 1807.4 True False 1289.6269444600284 1057.9367300366425 1284.6560980019087 1132.9624908519008 1442.9384611139083 750.4864089353142 1081.2200223070427 1020.5673923314423 1355.9482989657702 924.9712601059085 1358.5726982976546 0.9492513327229246 0.7787119021030521 0.9455924586234021 0.8339358595028059 1.0620988210067575 0.5524079866139687 0.7958499561060326 0.7512055803934922 0.9980682672814102 0.6808404594505205 1.0 10.407876052038178 -8.780808592838438 24.294668359385877 0.9990878380003707 0.8325253005074833 0.0 0.1565880488802305 159.9441235272655 200615.86089896044 0.020578875353285574 0.021925547800241706 1.656499873915154e-09 8.780808592838438 -0.1665625374928874 TYS(ph)APAINAIQGGSFES(ph)PKKEK ddPTM_A549_MK2206_60min_R1 1 TYSAPAINAIQGGSFESPKKEK 22 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 2 T(0.454)Y(0.013)S(0.533)APAINAIQGGS(0.313)FES(0.687)PKKEK 56.533 0.0015394999999999999 2764000.0 885.53 634.47 974.15 946.2 1155.1 1089.6 961.58 879.81 1329.6 1242.3 1338.1 True False 1034.9858148701178 666.76181295952 1112.29911818377 1178.0190424765328 985.1863201517167 1204.9007487820563 1136.2866391068733 1004.5257618051223 1028.4477229349038 961.6635671851786 1005.8128403187407 1.0290043767408381 0.6629084320977887 1.10587086741832 1.1712109800698312 0.9794926855770827 1.1979373303687642 1.1297197585455219 0.9987203598303532 1.0225040700504382 0.9561058763978683 1.0 9.974146160914554 -5.786156758381712 24.999469125054926 1.0438501810917862 0.8459560965780083 0.353636148854906 0.11055774648377316 155.67007955441787 157446.79034813624 0.014103199744678201 0.04387557424877352 1.6362258199147647e-06 5.786156758381712 -0.19789408451377788 TYS(ph)APAINAIQGGSFES(ph)PKKEK ddPTM_A549_PD325901_60min_R1 1 TYSAPAINAIQGGSFESPKKEK 22 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 2 T(0.471)Y(0.001)S(0.529)APAINAIQGGS(0.437)FES(0.563)PKKEK 76.002 5.6469e-05 2889900.0 2477.2 2664.9 2374.4 3314.6 3350.5 2944.5 2980.5 2962.2 2718.5 2858.4 3372.5 True False 2728.6835203817445 2889.4804754673632 2535.541062427103 3519.3353139972232 3115.1724385975085 2920.5209682458635 3093.92455849218 2903.1165971990554 2604.2508988384034 2677.920136182404 2957.703880038922 0.922568191764294 0.9769336595755959 0.8572667059535847 1.1898876482357357 1.0532401365874782 0.9874284535230183 1.046056226038242 0.9815440337999123 0.8804975090353307 0.9054050861059032 1.0 11.530261904311905 -8.530441782923432 24.23992709923841 0.9429078698144958 1.0068750018830983 0.1309757813490421 0.08339635847782684 227.2335304860384 728291.2289007686 0.014857729945020097 0.01686448293998138 2.9482086568192266e-09 8.530441782923432 0.0639671320686025 TYS(ph)APAINAIQGGSFESPK ddPTM_A549_MK2206_60min_R1 2 TYSAPAINAIQGGSFESPK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.014)YS(0.986)APAINAIQGGSFESPK;T(0.127)YS(0.873)APAINAIQGGSFESPK 184.8 1.9533000000000002e-43 8618400.0 3475.1000000000004 3040.1 2787.7 2465.5 3920.4 3224.8999999999996 2598.2 2936.1 3928.1000000000004 3375.5 3976.2000000000003 True False 4061.6119219621555 3194.828104683018 3183.0377783307426 3069.547610680501 3343.7143533224776 3566.1567774846294 3070.259308354454 3352.3011664291366 3038.3916218867325 2612.972205613434 2988.7998024627286 1.358944121521771 1.068933456851317 1.0649886204181238 1.0270168005736742 1.1187481846617175 1.1931735188640493 1.0272549221344982 1.1216211817422124 1.016592553098786 0.8742546768975232 1.0 11.545350549470971 -5.244439678436905 3.3887227597324507 1.0410968448675395 1.4067036710701273 0.5622460086647154 0.07791158654206384 0.1629195472963744 2.999342998146865 0.009302873134146745 0.15654889232688649 5.6958733176940356e-06 5.244439678436905 0.3656068262025878 TYS(ph)APAINAIQGGSFESPK ddPTM_A549_PD325901_60min_R1 2 TYSAPAINAIQGGSFESPK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.004)YS(0.996)APAINAIQGGSFESPK;TYS(1)APAINAIQGGSFESPK 249.52 5.421399999999999e-97 11786300.0 4396.799999999999 4325.799999999999 5165.200000000001 4782.1 5763.6 4280.0 5009.5 5321.6 5610.2 5778.0 4987.0 True False 4843.159899246914 4690.35034739642 5515.741532870823 5077.479456062908 5358.784619340577 4245.14509902948 5200.139263803581 5215.456513285563 5374.4228039960335 5413.176093920349 4373.630615197656 1.1073545814357801 1.0724157479367862 1.2611356600862718 1.160930106538831 1.2252485613942043 0.9706226868538669 1.1889754122659426 1.1924775940525703 1.2288241227598844 1.2376847910087425 1.0 12.094615664141388 -10.947920111099783 1.2141914254796682 1.0001609451968339 1.162396903869585 0.0 0.10462906686843597 0.411235751333578 1.0794151501004794 0.05518508145379458 0.0129381929179934 1.1274048243365316e-11 10.947920111099783 0.1622359586727511 TYS(ph)APAINAIQGGSFESPKK ddPTM_A549_MK2206_60min_R1 2 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.011)YS(0.989)APAINAIQGGSFESPKK;T(0.014)YS(0.986)APAINAIQGGSFESPKK 184.29 4.6724e-44 18180200.0 9005.3 8542.5 7521.4 7846.3 10591.8 7089.5 7088.1 6646.6 11939.4 10335.5 10836.5 True False 10525.174481553286 8977.276762032401 8588.047618444181 9768.643852233788 9033.760250872614 7839.706184370769 8375.916020147492 7588.7759043588085 9235.144963304003 8000.703371683505 8145.497977814834 1.2921462273049191 1.102115154467291 1.054330581363433 1.1992690783104696 1.1090494743816843 0.9624587969603673 1.0282877784710311 0.9316527884516921 1.1337729121604283 0.9822239712629366 1.0 12.991787185765581 -2.0000000004359944 0.6752891910134137 1.0511953578463449 24.59294499855282 0.4826080142652075 0.07447430691700685 177.89706016788742 0.9639724095312299 0.012891896799663422 6306.31196332302 0.009999999989960859 2.0000000004359944 23.541749640706474 TYS(ph)APAINAIQGGSFESPKK ddPTM_A549_PD325901_60min_R1 1 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.018)YS(0.982)APAINAIQGGSFESPKK 181.37 6.0298e-44 21690000.0 4185.4 4230.4 5274.2 5212.1 5849.9 5059.0 5144.2 5975.5 5437.7 5786.6 5577.4 True False 4610.2987268713705 4586.91065459009 5632.138928341068 5534.039579462056 5439.023205059411 5017.801181306101 5339.9653460142545 5856.313964810937 5209.172379111122 5421.233088452668 4891.415158051619 0.9425286093907791 0.9377471562682034 1.1514334290497024 1.1313780165138163 1.1119528867032253 1.0258383349543416 1.0917015165282566 1.1972637315749055 1.0649622268386791 1.1083158785916856 1.0 12.256036203037196 -2.642073379895158 17.44193149294272 1.0527467823681689 0.24097096756800795 0.0 0.08199018606310403 0.0 0.0 0.011053703640640183 0.0 0.002279956810079068 2.642073379895158 -0.8117758148001609 TYS(ph)DEANQMR ddPTM_A549_MK2206_60min_R1 4 TYSDEANQMR 10 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 T(0.011)YS(0.989)DEANQMR;T(0.014)YS(0.986)DEANQMR;T(0.015)YS(0.985)DEANQMR;T(0.031)YS(0.969)DEANQMR 144.1 4.3993e-08 395393000.0 11880.499999999998 14420.800000000001 11025.5 12264.18 16119.400000000001 13632.1 12365.5 14039.1 18639.7 18413.8 18236.1 True False 13885.637949662285 15154.757123783073 12589.081689200999 15268.904650559965 13748.257613240063 15074.639773744384 14612.151288375411 16029.185417940576 14417.837711484453 14254.109791060495 13707.573079244143 1.012990255050164 1.105575511884758 0.9184033976272028 1.1139028449667705 1.0029680333462911 1.0997307609886273 1.0659911279627587 1.1693671319696843 1.0518154911984956 1.0398711506885134 1.0 13.742685544651028 -3.8219867464111084 16.08912709810974 1.0422850906472636 0.5157021581523978 0.0 0.06659373667781704 0.0 0.0 0.008387258231927729 0.0 0.00015066530447938801 3.8219867464111084 -0.5265829324948658 TYS(ph)DEANQMR ddPTM_A549_PD325901_60min_R1 4 TYSDEANQMR 10 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5;Q9BXF6 RAB11FIP5 Rab11 family-interacting protein 5 1 T(0.032)YS(0.968)DEANQMR;T(0.105)YS(0.895)DEANQMR;T(0.007)YS(0.993)DEANQMR;T(0.205)YS(0.795)DEANQMR 137.01 4.6482e-07 494700000.0 14972.300000000001 14696.500000000002 15718.3 14966.0 17614.8 16719.6 14797.0 16981.3 16239.2 17685.1 17366.9 True False 16492.276873975286 15935.02563237123 16785.03835981636 15890.415829747915 16377.597215761043 16583.441120965712 15360.107932229086 16642.594649927854 15556.722897339196 16568.459767841945 15230.881397849656 1.0828182849814403 1.046231351694524 1.102039857140909 1.0433024468295955 1.075288867922856 1.0888037722693458 1.00848450795485 1.092687561225282 1.0213934762524999 1.0878201553182032 1.0 13.894711811296728 -8.943817568337879 0.7098046352501722 1.002654668657473 1.0706484516898722 0.0 0.03689352427036039 0.31689375862178887 0.3423899731813273 0.007131269080786534 0.006448552021586428 1.1381052629594664e-09 8.943817568337879 0.06799378303239911 TYS(ph)FEQPWPNAR ddPTM_A549_MK2206_60min_R1 1 TYSFEQPWPNAR 12 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 T(0.087)YS(0.913)FEQPWPNAR 187.62 2.186e-19 16263000.0 4363.9 4905.3 4647.8 4062.2 10803.0 8818.3 7461.4 8484.6 12880.0 12377.0 12810.0 True False 5100.41963288845 5154.958817769686 5306.927928444819 5057.439182359086 9213.893010647571 9751.446652886212 8817.039798074025 9687.318032997739 9962.700565133551 9581.027103800172 9628.923461985694 0.5296978060968648 0.5353619060449589 0.5511444710715786 0.5252341242845575 0.9568975230744502 1.0127244952547636 0.915682820917943 1.006064496331556 1.0346640104125435 0.9950257826459402 1.0 13.233158794789754 -6.788710381092274 5.155093684741705 1.0060458348528003 0.5343287900604512 0.9803347902464656 0.030870708818300535 0.018188050915956263 1.2439794985715493 0.00492731132599514 0.009735430258406428 1.6266331505284097e-07 6.788710381092274 -0.4717170447923491 down TYS(ph)FEQPWPNAR ddPTM_A549_PD325901_60min_R1 1 TYSFEQPWPNAR 12 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 T(0.042)YS(0.958)FEQPWPNAR 198.52 1.5741000000000002e-24 34839000.0 8298.2 7500.1 6983.3 8214.5 8163.5 7333.2 6229.6 6918.8 9474.7 7811.9 10375.0 True False 9140.627155188038 8132.159748603243 7457.228731994265 8721.891008516921 7590.1239225461195 7273.480850514707 6466.670836967918 6780.799106306402 9076.51130815679 7318.655300812807 9098.940772543758 1.0045814544446832 0.8937479594484452 0.8195710817787283 0.9585611365704685 0.8341766489402235 0.7993766562875743 0.710705894083983 0.7452295026216242 0.9975349367637771 0.804341459491307 1.0 13.151482892485287 -8.788770083376923 24.320993035005348 0.9988360066862378 0.8437996947665293 0.03798869073428013 0.09974059699014297 112.48375110941953 100096.23308973468 0.014666348255941403 0.015615672548512509 1.6264095533043316e-09 8.788770083376923 -0.15503631191970857 TYS(ph)GPMNK ddPTM_A549_MK2206_60min_R1 4 TYSGPMNK 8 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 T(0.002)YS(0.998)GPMNK;TYS(0.999)GPMNK;T(0.007)Y(0.002)S(0.991)GPMNK;T(0.055)Y(0.006)S(0.939)GPMNK 77.67699999999999 0.0031986000000000002 27925000.0 9084.7 9502.900000000001 9325.8 9646.599999999999 15020.7 10906.7 12261.600000000002 11650.400000000001 18206.0 17876.300000000003 16870.1 True False 10617.975260409656 9986.557019832337 10648.338671003643 12010.017433052326 12811.17492780097 12060.839754718487 14489.374003278808 13301.879877853624 14082.370069007873 13838.031414370464 12680.788578926225 0.8373276783476471 0.7875343838181057 0.8397221201763239 0.9471033570429026 1.010282195627126 0.9511111773255166 1.1426240500025535 1.0489789176013524 1.110527944012164 1.0912595323422882 1.0 13.630356844548151 -6.527784366742839 1.1095531931998492 1.0558743738973646 0.7987479878734352 0.8143533305152368 0.04876686014969052 0.18580075400430587 0.42502678675047934 0.008521837491015387 0.03250223079596548 2.966303835104664e-07 6.527784366742839 -0.25712638602392945 TYS(ph)GPMNK ddPTM_A549_PD325901_60min_R1 2 TYSGPMNK 8 0 Q8WVV4-3;Q8WVV4;Q8WVV4-1 Q8WVV4-3 POF1B Protein POF1B 1 T(0.001)YS(0.999)GPMNK;T(0.201)YS(0.799)GPMNK 74.376 0.0017875999999999999 40633000.0 6205.0 6454.4 6821.5 6270.3 7784.3 6244.7 7184.6 6746.1 6770.7 7361.6 8103.2 True False 6834.927032120426 6998.3349397187685 7284.448011011832 6657.602190115484 7237.55762237713 6193.845233623684 7458.013884563972 6611.5437432869285 6486.151024743489 6896.787319661485 7106.55777041702 0.9617774530128593 0.9847714133629141 1.0250318433117267 0.936825169821255 1.0184336575022908 0.8715675624853498 1.049455182874891 0.9303440507877496 0.9126994016349036 0.9704821296706034 1.0 12.794935210178242 TYS(ph)IDGPNASRPQSAR ddPTM_A549_MK2206_60min_R1 2 TYSIDGPNASRPQSAR 16 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.021)YS(0.977)IDGPNAS(0.002)RPQSAR;T(0.026)YS(0.957)IDGPNAS(0.014)RPQS(0.003)AR 77.554 0.00011482 26172000.0 4412.8 5961.1 4928.4 5078.4 7081.4 6225.9 5721.9 6106.9 8907.8 9877.4 9637.8 True False 5157.572757398233 6264.4945280832735 5627.321227795397 6322.608227978035 6039.735440673856 6884.72060558205 6761.495164526735 6972.571776596881 6890.197522833586 7646.08847984777 7244.468270251819 0.7119325483937767 0.8647279958154221 0.7767749154072546 0.8727497991730813 0.8337030704482489 0.95034174334823 0.9333321525185869 0.962468398851102 0.9510977570468511 1.0554381901629877 1.0 12.822664087346597 -2.6997272386909996 0.20009974246156764 1.0075565316202917 2.4508571734662045e-05 0.8227817188347926 0.04038649943736214 9.513724417391034 0.13512625693482996 0.027072321202012466 2.869769718065552 0.001996515845287373 2.6997272386909996 -1.007532023048557 TYS(ph)IDGPNASRPQSARPSINEIPER ddPTM_A549_MK2206_60min_R1 2 TYSIDGPNASRPQSARPSINEIPER 25 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.022)YS(0.976)IDGPNAS(0.001)RPQSARPSINEIPER;T(0.042)YS(0.958)IDGPNASRPQSARPSINEIPER 120.33 1.0572e-17 44348000.0 2734.4 3554.0 2975.0 3066.8 4020.8999999999996 4209.4 3583.7 3926.3 5631.2 5900.8 6229.8 True False 3195.8998703384996 3734.8834196386474 3396.8997347397353 3818.1661376738825 3429.430936454022 4654.835914026423 4234.811901835831 4482.865048789458 4355.742191178573 4567.805181716414 4682.768726266863 0.6824808264418162 0.7975801578003882 0.7254041216440275 0.8153650886615005 0.7323511232185043 0.9940349793309762 0.9043393234608563 0.9573107942837122 0.9301638508743955 0.975449664232703 1.0 12.193146072281143 -7.2599175227890385 24.999969478725063 0.9619094749506647 0.7554385120827393 0.8621373181726957 0.0417073823738541 37.71684919494359 619582.5787270952 0.00631476446526576 0.010573540993902326 5.49645247513201e-08 7.2599175227890385 -0.20647096286792543 TYS(ph)LGSALR ddPTM_A549_PD325901_60min_R1 2 TYSLGSALR 9 0 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 T(0.039)YS(0.957)LGS(0.004)ALR;T(0.015)YS(0.985)LGSALR 71.221 0.0032015 11503900.0 3161.2 3046.2 3032.8 2571.5 3426.8 2782.3 3242.1 3365.7 2889.5 3112.2 3419.5 True False 3482.1226968475594 3302.9139646398303 3238.6240457079352 2730.3357146997705 3186.11338981822 2759.641871268625 3365.4798896451916 3298.5684731594274 2768.064363506923 2915.695160868626 2998.9231779964707 1.1611243403620315 1.101366646826362 1.0799289789982565 0.9104386983743482 1.0624191420424474 0.9202109248801413 1.1222294436677138 1.0999176295550006 0.9230194303797471 0.9722473660750963 1.0 11.550228850502265 -2.0000000000458447 0.42924168385611655 0.978520219471844 4.805323239544616 0.29440279291705596 0.07217345695927034 55.391434237750694 0.614225984060227 0.01562291734053779 185.18538020853404 0.009999999998944388 2.0000000000458447 3.826803020072772 TYS(ph)LGSALRPSTSR ddPTM_A549_MK2206_60min_R1 4 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYS(0.655)LGS(0.339)ALRPS(0.001)T(0.004)S(0.001)R;TYS(1)LGSALRPSTSR;TYS(0.849)LGS(0.15)ALRPST(0.001)SR;TYS(1)LGSALRPSTSR 193.32 1.3372e-27 442966000.0 8895.6 9174.0 8952.4 8861.800000000001 15090.0 13084.099999999999 13839.699999999999 15696.3 24483.800000000003 22575.7 22771.8 True False 10396.959803460784 9640.917414677815 10221.984936229916 11032.941397821322 12870.28098960213 14468.650777477342 16354.194346021528 17921.29859290273 18938.258392594464 17475.8336904954 17116.933590292414 0.6074078484102577 0.5632385826480919 0.5971855228805202 0.6445629609779214 0.7519034248576683 0.8452828715584314 0.9554394926960831 1.0469923539965418 1.1064048529892634 1.0209675464539123 1.0 14.063136653115984 -7.33888418394996 1.028382453190055 1.0526373378993747 0.5833075161595556 0.974505499270158 0.031207655894573732 0.06944616014045651 0.14541096204287182 0.00745966461589429 0.016047310076866276 4.582640785946154e-08 7.33888418394996 -0.4693298217398192 TYS(ph)LGSALRPSTSR ddPTM_A549_PD325901_60min_R1 6 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 T(0.179)Y(0.037)S(0.75)LGS(0.034)ALRPSTSR;T(0.002)YS(0.537)LGS(0.46)ALRPSTSR;T(0.08)Y(0.002)S(0.911)LGS(0.007)ALRPSTSR;TYS(0.712)LGS(0.288)ALRPSTSR;T(0.001)YS(0.998)LGSALRPSTSR;TYS(0.917)LGS(0.079)ALRPS(0.004)TSR 169.8 1.3431999999999998e-22 572384000.0 16464.48 16681.82 16529.12 18008.3 19548.43 18058.82 18872.8 19625.66 19943.55 19584.82 20820.190000000002 True False 18135.94188909044 18087.65551625238 17650.885480873105 19120.63179118331 18175.415715222407 17911.754957302684 19591.014731592433 19234.21081526758 19105.391949063323 18348.231122833717 18259.438620058572 0.9932365537879974 0.9905920928139881 0.9666718593135195 1.0471642742717562 0.9953983850990981 0.9809586882712842 1.072925358727682 1.0533845654015994 1.04632964608646 1.0048628276379539 1.0 14.156354790407867 -7.712683204738124 24.999992873115303 1.028778570273008 0.9964496435648404 0.3384868506006593 0.026979826019052407 137.52443404898548 70516.06161883251 0.004579655492073165 0.006792721762851399 1.9378349984723766e-08 7.712683204738124 -0.03232892670816745 TYS(ph)LTTPAR ddPTM_A549_MK2206_60min_R1 2 TYSLTTPAR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.324)YS(0.621)LT(0.055)TPAR;T(0.415)YS(0.57)LT(0.014)TPAR 150.61 2.2279e-05 499030000.0 7055.5 7880.2 8420.400000000001 9200.1 13438.5 10599.900000000001 10180.0 10766.2 16270.7 16711.9 16096.2 True False 8246.29590958649 8281.26852094442 9614.53933660588 11454.12491300819 11461.714451873311 11721.574382355846 12029.57422794563 12292.341820104692 12585.412428968824 12936.670183081374 12099.069307479647 0.6815644823596991 0.6844550031484603 0.7946511497923373 0.9466947103053 0.9473219931708033 0.9687996724764248 0.9942561632000029 1.0159741636082342 1.040196738206014 1.0692285376928887 1.0 13.562608455386128 -6.097545555750875 0.9333472572108414 1.0155236659534332 0.6259249738530226 0.9556064155711814 0.027667686215391018 0.10298648373081198 0.13237183353983797 0.0039583329795051 0.030115647455179053 7.988301431914187e-07 6.097545555750875 -0.38959869210041065 TYS(ph)LTTPAR ddPTM_A549_PD325901_60min_R1 4 TYSLTTPAR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.256)YS(0.58)LT(0.164)T(0.001)PAR;T(0.026)YS(0.675)LT(0.297)T(0.003)PAR;T(0.014)YS(0.984)LT(0.003)TPAR;T(0.003)YS(0.945)LT(0.051)TPAR 148.32 2.6565e-05 952170600.0 20257.2 21619.9 21174.7 23715.399999999998 25161.3 22716.600000000002 23340.899999999998 23055.699999999997 24125.2 23648.0 25779.1 True False 22313.69603143754 23441.884848045665 22611.74247581503 25180.24639641877 23394.05708977273 22531.60354126472 24229.150722130573 22595.83597665325 23111.301741642896 22154.86124420707 22608.434127179065 0.9869633565029963 1.0368645929292668 1.0001463324977464 1.1137545508358742 1.034749109919524 0.9966016847747107 1.0716863709284112 0.9994427676656 1.022242478697775 0.9799378904164474 1.0 14.46457345323181 -9.507435099515474 0.5760696459989819 1.0019356693581685 1.0337683671780766 0.1410641903878489 0.03576734116712623 1.268768138268728 0.9353900396915205 0.016491841334937852 0.009109027467719145 3.108600413820292e-10 9.507435099515474 0.03183269781990816 TYS(ph)MICLAIDDDDKTDKTK ddPTM_A549_MK2206_60min_R1 1 TYSMICLAIDDDDKTDKTK 19 2 Q8IUC4;Q8IUC4-2 Q8IUC4 RHPN2 Rhophilin-2 1 T(0.093)YS(0.907)MICLAIDDDDKTDKTK 156.29 3.8693e-27 8744800.0 1625.3 1831.3 2149.1 1585.5 3177.0 2676.9 1917.6 1968.9 3216.1 2330.9 2528.9 True False 1899.6109052300912 1924.5053478852715 2453.8746957745093 1973.9475711757984 2709.6675085464517 2960.167781217592 2266.0030981835516 2247.9976045033645 2487.6584850563686 1804.3480711196437 1900.9043359106656 0.9993195708715374 1.0124156758069045 1.2908985735986196 1.0384255187834794 1.4254623219891454 1.5572418481540606 1.1920658264467465 1.1825937592100957 1.308671056223672 0.9492050899317009 1.0 10.89247021402886 -3.7823034085666833 10.87116689274313 1.1816228166546567 0.7324511891814887 0.0 0.19024282327443576 0.0 0.0 0.025521891026087873 0.0 0.0001650808101046317 3.7823034085666833 -0.4491716274731681 TYS(ph)MICLAIDDDDKTDKTK ddPTM_A549_PD325901_60min_R1 1 TYSMICLAIDDDDKTDKTK 19 2 Q8IUC4;Q8IUC4-2 Q8IUC4 RHPN2 Rhophilin-2 1 T(0.001)YS(0.999)MICLAIDDDDKTDKTK 202.85 1.7376e-55 18810000.0 3428.0 4093.6 4797.9 3881.1 3882.5 4423.0 4473.7 5283.9 3322.5 4347.7 4401.3 True False 3776.0080364397795 4438.582038490449 5123.5143461164935 4120.826732382375 3609.8065938978734 4386.980554440978 4643.949101602572 5178.5084693606395 3182.8668793049837 4073.185480016875 3859.9680021394547 0.9782485332383225 1.1499012520389515 1.3273463259997742 1.0675805421439593 0.9351908077727782 1.1365328811040447 1.2031055954423928 1.341593626291814 0.8245837472074442 1.055238146471484 1.0 11.914373172739364 -8.77964345148778 24.999935238616505 0.9171645446110589 1.141271905330598 0.2635875076084585 0.1306092944510881 187.29956070601068 257220.32268969907 0.023285221800256436 0.024811256950830557 1.6609499600006135e-09 8.77964345148778 0.22410736071953907 TYSAPAINAIQGGS(ph)FESPKK ddPTM_A549_MK2206_60min_R1 1 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.649)FES(0.351)PKK 115.55 1.6218e-14 16110000.0 1229.5 1760.0 1913.6 1743.9 2194.1 1703.1 1505.3 1625.9 2489.4 1773.4 3143.9 True False 1437.0095416110241 1849.576482432195 2184.9772545875494 2171.1555782866467 1871.350796506695 1883.320911573716 1778.7935250811945 1856.3763041099191 1925.5548747549283 1372.7877083202095 2363.1828627741475 0.6080822454526918 0.7826632934621791 0.9245908511805125 0.9187420967237045 0.7918772711096553 0.7969425224093238 0.7527109108234914 0.7855406931695135 0.8148141665577727 0.580906255688013 1.0 11.20651555384273 -10.467272072175518 0.6959424335669389 1.0078129025304587 0.8009607911388298 0.0 0.14730110986894934 0.5796013868263712 0.48250019587514764 0.06664501308141543 0.016969949219317694 3.409792316642436e-11 10.467272072175518 -0.20685211139162896 TYSAPAINAIQGGS(ph)FESPKKEK ddPTM_A549_MK2206_60min_R1 1 TYSAPAINAIQGGSFESPKKEK 22 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.5)FES(0.5)PKKEK 95.366 1.8180999999999998e-07 32550000.0 1556.0 1611.5 1690.7 1758.3 1835.3 1636.8 1838.9 2012.9 2717.1 2289.8 2335.1 True False 1818.6147594524243 1693.518466726978 1930.4666828653685 2189.0835789330854 1565.3298012072082 1810.0050895800932 2173.0043268928525 2298.234739247713 2101.68118831711 1772.5325896648333 1755.2302245185645 1.0361118069005708 0.9648412174485469 1.0998367370268303 1.2471774633060007 0.89180882333345 1.031206655569387 1.2380166980595824 1.3093636989290607 1.1973820635942913 1.0098576043783742 1.0 10.77744455848963 TYSAPAINAIQGGS(ph)FESPKKEK ddPTM_A549_PD325901_60min_R1 1 TYSAPAINAIQGGSFESPKKEK 22 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.5)FES(0.5)PKKEK 75.226 6.277600000000001e-05 1902700.0 1475.6 1658.2 1573.3 1373.9 1663.1 1821.0 1478.0 1906.7 1377.7 1920.0 1621.6 True False 1625.4018257206933 1797.9423334534063 1680.0735990214628 1458.762682646709 1546.2895933835298 1806.170379750625 1534.2460987926331 1868.6693727227862 1319.8000600808048 1798.7708723307492 1422.1534801693447 1.1429159006995129 1.264239309275757 1.1813588494129381 1.0257420897166494 1.0872874235763945 1.2700249339723537 1.078818932123937 1.3139716625383304 0.9280292728486998 1.2648219038331632 1.0 10.473861455055811 -8.78266061312341 24.99942396704204 0.9660137993729198 1.1666849804775474 0.0 0.12374578370085332 128.37409041320043 151228.9547578637 0.014532784148799046 0.015478486940567965 1.6494508797034664e-09 8.78266061312341 0.20067118110462767 TYSAPAINAIQGGSFES(ph)PKK ddPTM_A549_MK2206_60min_R1 1 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.035)FES(0.965)PKK 137.89 1.0127e-17 18988000.0 1475.3 2500.6 1517.4 1576.2 2103.1 1720.3 1913.9 1656.3 2255.9 2430.4 2555.5 True False 1724.2945723779949 2627.8698590738336 1732.5901369727992 1962.3690707583057 1793.7367759597244 1902.341004157279 2261.6308560771263 1891.0855972060149 1744.9422519320476 1881.370952013892 1920.8988217880142 0.8976498672496369 1.3680417881810951 0.90196845212288 1.0215889814184436 0.9338007580691186 0.990338992652689 1.1773815624354182 0.9844795445528731 0.9083988350348497 0.9794222010416308 1.0 10.907565815560956 -8.509300698746683 24.140950535952847 0.9562015346534136 1.0446396872694872 0.07002534686005502 0.12957208753230354 751.5872145309907 1336278.6345190846 0.020382434835377595 0.024106651467162607 3.0952754365279756e-09 8.509300698746683 0.08843815261607357 TYSAPAINAIQGGSFES(ph)PKK ddPTM_A549_PD325901_60min_R1 2 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGSFES(1)PKK;TYSAPAINAIQGGS(0.249)FES(0.751)PKK 242.67 6.5345e-86 58310000.0 8224.8 7845.0 8435.099999999999 6870.700000000001 8741.5 8785.6 8696.1 8448.5 8554.1 8818.1 8179.9 True False 9059.775641222259 8506.125682029893 9007.556610376882 7295.087534508153 8127.527196537867 8714.052986456394 9027.034844188505 8279.98803977996 8194.600924684048 8261.323661093644 7173.82415665838 1.262893464263887 1.1857170591691935 1.255614357652818 1.0169035893829683 1.1329420709307891 1.214701224362804 1.258329539038125 1.1541944517966607 1.14229185797344 1.1515927182890178 1.0 12.80852666733889 -10.185581781794987 0.5475269081602904 0.9887819226447014 1.18620292721045 0.11805975142952008 0.08021677779192615 0.6425553507470241 0.34713282554130015 0.06015347458487022 0.017063573945100982 6.522562033658905e-11 10.185581781794987 0.19742100456574851 TYSAPAINAIQGGSFES(ph)PKKEK ddPTM_A549_MK2206_60min_R1 1 TYSAPAINAIQGGSFESPKKEK 22 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.001)FES(0.999)PKKEK 168.11 1.0641999999999999e-40 35244000.0 2094.7 2493.4 2315.0 2233.0 3282.6 2312.6 2850.2 2316.2 3816.8 3762.5 3044.7 True False 2448.2341495019223 2620.3034098275184 2643.3018103941145 2780.085100243178 2799.7338884339265 2557.317797020359 3368.044446413621 2644.5284430650077 2952.3008941771527 2912.548636830263 2288.616960554866 1.0697439509092677 1.144928773573467 1.1549778123435983 1.214744602595778 1.223330044602633 1.1174075177701854 1.4716505664613495 1.1555137834964975 1.289993452404276 1.2726238977640572 1.0 11.160260307909683 -10.914143341905179 1.1566674324029529 0.9995132806287003 1.2130132491295924 0.0 0.12891458165823272 0.41708557364782106 0.9874097139518463 0.07121399501523296 0.016720167403617127 1.2185873293447705e-11 10.914143341905179 0.21349996850089215 TYSAPAINAIQGGSFES(ph)PKKEK ddPTM_A549_PD325901_60min_R1 2 TYSAPAINAIQGGSFESPKKEK 22 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGSFES(1)PKKEK;TYSAPAINAIQGGS(0.018)FES(0.982)PKKEK 197.08 5.042999999999999e-61 127715000.0 6273.5 5826.5 6588.5 6536.5 7456.2 7338.3 7204.3 7787.700000000001 7807.7 7180.5 7507.4 True False 6910.3811016933905 6317.519603103525 7035.635229869004 6940.244759531418 6932.5022344935805 7278.539317805612 7478.463578844229 7632.368214167538 7479.569521008129 6727.122004568205 6584.037393329637 1.0495658953417208 0.95952061413015 1.0685898043344781 1.054101662083915 1.0529257080946985 1.1054826822793538 1.135847677053102 1.1592230964392725 1.1360156503038343 1.0217320471757236 1.0 12.68475681407564 -5.888773804322856 7.40216135380586 1.0784011830923912 1.0049718239203123 0.253527894578886 0.050945778285029664 0.28485783681190324 17.427147985485007 0.008692400697881679 0.02735341393988655 1.2918919607025064e-06 5.888773804322856 -0.07342935917207893 TYSIDGPNASRPQS(ph)ARPSINEIPER ddPTM_A549_MK2206_60min_R1 1 TYSIDGPNASRPQSARPSINEIPER 25 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.002)YS(0.007)IDGPNAS(0.05)RPQS(0.941)ARPSINEIPER 94.163 3.0843e-09 5142400.0 2157.3 2008.7 2173.2 2530.1 2698.6 2295.4 1778.2 2082.0 3421.7 3492.4 3928.8 True False 2521.3994990788647 2110.934250148609 2481.3924381634947 3149.974613580506 2301.6395148138045 2538.2977044367954 2101.275922606379 2377.1298758575876 2646.6904133321027 2703.4644144228605 2953.170530636175 0.8537940741727847 0.7148026936642461 0.840246918497101 1.066641624959577 0.7793791421581004 0.8595161295646522 0.7115321993118088 0.8049416216223395 0.896219973034185 0.9154447352014167 1.0 11.528048951868692 -9.565529708008073 1.0079670905044271 0.9803361386670152 0.8311106922749047 0.20356745632866258 0.09311187188665808 0.40608940665353876 0.8622020444564809 0.027091021962364105 0.018884296699384302 2.7193824597904134e-10 9.565529708008073 -0.14922544639211044 TYSIDGPNASRPQS(ph)ARPSINEIPER ddPTM_A549_PD325901_60min_R1 1 TYSIDGPNASRPQSARPSINEIPER 25 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 TYSIDGPNAS(0.051)RPQS(0.948)ARPSINEIPER 98.00200000000001 1.134e-09 22107000.0 1963.8 2132.7 2198.0 2578.9 2720.4 1940.9 2123.0 1988.8 2694.4 2751.5 3056.2 True False 2163.1635303268486 2312.430113711302 2347.1694976477324 2738.1927958931497 2529.328488870517 1925.0939539033434 2203.7919267501766 1949.1318238165823 2581.163738028395 2577.769820426073 2680.30677484802 0.8070581884976601 0.8627483000868148 0.8757092731599064 1.0215967894378106 0.9436712665153549 0.7182364242662115 0.8222163027868842 0.7272047521228621 0.963010563660107 0.9617443214395631 1.0 11.388182418637307 -8.967318822717736 22.313124024950444 0.9836813856227083 0.8521784931319728 0.3215620072565031 0.08256068049596736 47.90480272886466 32707.53061929772 0.0151705992284767 0.016024693964550328 1.0781549403718098e-09 8.967318822717736 -0.13150289249073555 TYSLGS(ph)ALRPSTSR ddPTM_A549_MK2206_60min_R1 3 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYSLGS(1)ALRPSTSR;TYS(0.001)LGS(0.999)ALRPSTSR;TYSLGS(0.529)ALRPS(0.449)T(0.02)S(0.002)R 145.1 3.7668e-13 175946900.0 7165.1 8429.9 7840.5 7362.599999999999 10181.099999999999 7176.2 7471.599999999999 7147.8 12280.2 9499.6 12003.0 True False 8374.393710123752 8858.945902985886 8952.400796714928 9166.437330519679 8683.473676821617 7935.580720823968 8829.093006043082 8161.0225392194425 9498.75430744977 7353.633762241271 9022.323834052639 0.9281858935850399 0.9818918125671658 0.992249996938283 1.015972990896549 0.9624431395432614 0.8795495336659259 0.978583031205303 0.904536645915721 1.052805738539217 0.8150487499114929 1.0 13.139283353627503 -8.775463404230573 24.995001079515568 1.024936043552366 0.9580309828940979 0.0 0.07440817179180621 188.94082993528355 336747.6145832584 0.007266316076659562 0.007753768160302695 1.6770136431367936e-09 8.775463404230573 -0.06690506065826807 TYSLGS(ph)ALRPSTSR ddPTM_A549_PD325901_60min_R1 5 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYS(0.001)LGS(0.999)ALRPSTSR;TYS(0.002)LGS(0.998)ALRPSTSR;TYSLGS(0.984)ALRPS(0.013)T(0.002)S(0.001)R;TYSLGS(1)ALRPSTSR;TYSLGS(1)ALRPSTSR 168.67 1.4800999999999998e-22 593124000.0 17384.3 15832.0 17473.1 18620.7 21472.6 19986.5 19073.9 20238.9 19843.9 19417.9 19481.4 True False 19149.141338354733 17166.218202408825 18658.929640285984 19770.85834832198 19964.438652448553 19823.736570502948 19799.767702138568 19835.219262390103 19009.929892021108 18191.85048012046 17085.311302769536 1.1207955769146944 1.0047354653483063 1.0921035800653724 1.1571845544960668 1.1685147726405376 1.1602795067181195 1.1588766134409865 1.1609515864762034 1.112647557609301 1.0647655262313866 1.0 14.060468914168855 -10.29799884474811 0.8251130995944178 1.0040750514179024 1.1262518223068407 0.3347709432762128 0.04845658084864444 0.4064235333993675 0.5278545439124839 0.0276884011545393 0.009881833052295386 5.0350194813442676e-11 10.29799884474811 0.1221767708889383 TYSLGSALRPS(ph)TSR ddPTM_A549_MK2206_60min_R1 3 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYSLGSALRPS(0.975)T(0.02)S(0.004)R;TYSLGS(0.004)ALRPS(0.711)T(0.121)S(0.165)R;TYSLGSALRPS(0.979)T(0.02)SR 176.49 1.789e-23 65522900.0 9635.1 12286.3 10016.9 10072.3 12454.7 10047.7 9736.3 10046.5 13792.8 14174.9 12424.7 True False 11261.269324421623 12911.620190969697 11437.447042996455 12540.013952162735 10622.63012864133 11110.940944876536 11505.259681291458 11470.622141115873 10668.752822575627 10972.7802451044 9339.30408572472 1.2057931962655182 1.382503457693954 1.2246573125805789 1.3427139578130187 1.1374113136414732 1.1896968813618343 1.2319183073691151 1.228209514951859 1.1423498715373228 1.1749034129723301 1.0 13.189099336794142 -9.86444960966346 0.2183432677246124 0.8895749916728973 1.3239058103456975 0.2974353485469561 0.08141436913584423 1.5236289848230204 0.16391315542017207 0.2082809804880934 0.0794411451544789 1.3663135971793933e-10 9.86444960966346 0.4343308186728002 TYSLGSALRPS(ph)TSR ddPTM_A549_PD325901_60min_R1 5 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYSLGS(0.001)ALRPS(0.754)T(0.203)S(0.042)R;TYSLGSALRPS(0.484)T(0.484)S(0.032)R;TYSLGSALRPS(0.898)T(0.099)S(0.004)R;TYSLGSALRPS(0.333)T(0.333)S(0.333)R;TYSLGSALRPS(0.973)T(0.026)S(0.001)R 133.86 1.7884e-09 110810000.0 14546.2 13307.899999999998 14454.399999999998 15121.0 17831.100000000002 15340.3 15785.3 15778.5 17334.2 19740.0 19378.800000000003 True False 16022.91951565353 14429.403437079101 15435.362505368234 16054.989827717365 16578.705049955548 15215.373682860245 16386.018229547604 15463.785439506211 16605.703855304273 18493.613031150515 16995.33045233455 0.9427836405177137 0.8490216461249812 0.908211967319998 0.9446706477844321 0.9754858898714869 0.8952678928799643 0.9641482568111379 0.9098843639949372 0.9770744912478735 1.088158484650715 1.0 14.052850793050656 -8.054298462764578 0.23102594884386285 1.0169465246979172 0.8774291159372444 0.5031154899467024 0.04239893065041259 1.4592402017375117 0.246687508297048 0.045515553558989494 0.07232399432231462 8.824732246859137e-09 8.054298462764578 -0.13951740876067287 TYSLGSALRPST(ph)SR ddPTM_A549_MK2206_60min_R1 2 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 1 TYSLGSALRPS(0.061)T(0.469)S(0.469)R;TYSLGSALRPS(0.065)T(0.467)S(0.467)R 61.11 0.0026521 17131200.0 2058.25 2481.7 1846.39 2387.08 2839.8 2442.2 2103.2 2324.26 3482.5 3170.8999999999996 3316.3 True False 2405.632280618862 2608.0079298022583 2108.235865958353 2971.914707160092 2422.069181860313 2700.631982998842 2485.324215738236 2653.7309727477236 2693.71931040975 2454.5914877143077 2492.7711847762034 0.9650433603013728 1.0462283685441431 0.8457398251527152 1.19221319843157 0.97163718701994 1.0833854304366488 0.9970125741650708 1.064570622829135 1.0806123429461847 0.9846838340818981 1.0 11.283534746416947 -6.2474266396136695 24.991236849464393 1.0445372362980778 0.96172632881659 0.24578517090637042 0.07308998810848547 897.4163786377923 1600507.9236109033 0.009097775330741015 0.023929188841563195 5.656833034123329e-07 6.2474266396136695 -0.08281090748148778 TYSLGSALRPSTSR ddPTM_A549_PD325901_60min_R1 1 TYSLGSALRPSTSR 14 1 P08670;B0YJC4;A0A1B0GTT5;A0A1B0GVG8 P08670 VIM Vimentin 0 101.55 2.9576e-05 9655600.0 3023.8 3023.5 3522.6 3489.1 3623.8 3356.9 3088.3 3559.8 3435.6 4140.2 3548.0 False True 3330.773949996094 3278.3009559741745 3761.664819114604 3704.613782678966 3369.2767894313233 3329.562519376647 3205.8269464826026 3488.796996390926 3291.2136796208283 3878.7870654290473 3111.618492625083 1.0704313391537028 1.0535677698741506 1.208909391697668 1.1905745487306219 1.082805233809004 1.0700420142341094 1.0302763510632185 1.1212161788663366 1.0577176114042925 1.2465496893729895 1.0 11.603449470777338 -9.090043000925943 0.3722176210718654 0.9954715787701802 1.1249100696974335 0.0 0.08874945788597662 0.8850164871209878 0.32734744323220166 0.04143303910807457 0.02857990355324739 8.127500391238321e-10 9.090043000925943 0.12943849092725324 TYSS(ph)PGSFK ddPTM_A549_MK2206_60min_R1 2 TYSSPGSFK 9 0 Q8N3Z6 Q8N3Z6 ZCCHC7 Zinc finger CCHC domain-containing protein 7 1 T(0.016)YS(0.084)S(0.9)PGS(0.001)FK;TYS(0.068)S(0.931)PGS(0.001)FK 138.23 4.3043e-05 43804000.0 20819.6 21780.2 21868.3 19463.2 27729.0 20308.9 19061.6 20221.3 30617.0 28835.0 31119.0 True False 24333.439489650176 22888.719149244138 24969.55377116266 24231.68487373625 23650.100832384174 22457.974318043227 22524.845982653103 23087.73120013402 23682.29838530233 22321.153473222774 23391.293459292192 1.0402776371472402 0.9785144711675443 1.0674721265250726 1.0359275307244804 1.0110642608773381 0.960099720741257 0.962958547882486 0.9870224252589341 1.0124407368287083 0.9542504997454809 1.0 14.513684019594296 -6.981381351005294 8.098157822603895 0.9975130133037484 1.028818366658321 0.32854364844567996 0.02862209029378698 0.21344026338364933 70.5274239498421 0.003906851793352974 0.007325447604127301 1.0438032602097221e-07 6.981381351005294 0.03130535335457263 TYSS(ph)PGSFK ddPTM_A549_PD325901_60min_R1 2 TYSSPGSFK 9 0 Q8N3Z6 Q8N3Z6 ZCCHC7 Zinc finger CCHC domain-containing protein 7 1 TYS(0.01)S(0.986)PGS(0.004)FK;TYS(0.008)S(0.989)PGS(0.003)FK 144.65 3.3444e-05 43516000.0 12289.7 12607.5 13311.2 12848.2 15258.9 14120.5 14574.099999999999 15025.6 16223.8 14020.8 15347.2 True False 13537.341296801034 13669.978271025093 14214.57807874818 13641.804133620677 14187.167504347262 14005.507329636856 15128.72535075353 14725.902620644838 15541.970105784243 13135.524295195297 13459.591693916485 1.0057765201688615 1.0156309776621009 1.0560928148491262 1.0135377390226887 1.0540563062369588 1.0405595985476377 1.1240107199976552 1.0940824176190058 1.1547133419217284 0.9759229398565142 1.0 13.716347025003136 -7.321987365382372 2.1185265671123568 1.0799415425715138 1.02645156551157 0.10573607570875232 0.05016926733458642 0.4897027331080203 4.290759743589395 0.009121304951616973 0.01620632430319509 4.764448474717533e-08 7.321987365382372 -0.05348997705994374 TYSTSFT(ph)PMYHAVTK ddPTM_A549_PD325901_60min_R1 1 TYSTSFTPMYHAVTK 15 0 P00390-2;P00390-3;P00390;P00390-5;P00390-4 P00390-2 GSR Glutathione reductase, mitochondrial 1 T(0.184)Y(0.007)S(0.184)T(0.166)S(0.166)FT(0.25)PMY(0.044)HAVTK 41.86 0.020703 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 TYT(ph)HEVVTLWYR ddPTM_A549_MK2206_60min_R1 4 TYTHEVVTLWYR 12 0 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 T(0.124)YT(0.875)HEVVTLWYR;T(0.006)YT(0.993)HEVVT(0.001)LWYR;T(0.493)Y(0.004)T(0.503)HEVVTLWYR;T(0.493)YT(0.501)HEVVT(0.006)LWYR 152.47 1.5342e-12 108962700.0 6796.2 6882.22 7169.5 5455.47 11665.810000000001 8722.640000000001 7561.99 7520.449999999999 11247.42 9719.140000000001 9949.135999999999 True False 7943.232408862828 7232.495601661644 8186.242906963543 6792.0603949053575 9949.784802605063 9645.663975180181 8935.90569901597 8586.496817912199 8699.897328439005 7523.579523764112 7478.490949015344 1.0621437483866547 0.9671062853414178 1.0946383385061642 0.9082126917329003 1.3304535461014502 1.2897874773051878 1.1948808603148093 1.1481590171667908 1.1633225723946992 1.0060291006643132 1.0 12.868531469212048 -6.708077783833872 24.999998466742344 1.1242803893788798 1.011289457954796 0.2812726160843847 0.10809027045355397 141.31090342035597 66203.44744863543 0.017489491783050745 0.03640727552742436 1.9584938682088572e-07 6.708077783833872 -0.11299093142408378 TYT(ph)HEVVTLWYR ddPTM_A549_PD325901_60min_R1 1 TYTHEVVTLWYR 12 0 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 T(0.036)YT(0.947)HEVVT(0.016)LWYR 53.479 0.02398 5839800.0 3661.8 4238.3 4366.9 4350.5 4358.0 4301.9 4635.6 4521.0 4300.2 4856.6 4771.2 True False 4033.543240325316 4595.476415315145 4663.264094302949 4619.220504297628 4051.9091142838224 4266.866752690399 4812.010294697654 4430.82510834411 4119.477548348316 4549.953447167458 4184.372647128746 0.9639541170151451 1.0982474083584528 1.1144476096082911 1.1039218764292582 0.968343275320897 1.0197148085312762 1.1499956386531642 1.0588983061497823 0.9844910804430957 1.0873681268061934 1.0 12.030795623872354 -8.753020439074815 18.104058956939134 0.9926762954586928 1.0629083777678476 0.0 0.06243169707606471 6.480624671145751 13934.154862714358 0.009377668558285973 0.010500983952823232 1.7659547081179221e-09 8.753020439074815 0.07023208230915479 TYTVS(ph)PR ddPTM_A549_PD325901_60min_R1 2 TYTVSPR 7 0 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 TYTVS(1)PR;TYTVS(1)PR 122.19 0.0064113 33240000.0 8817.3 8761.6 8954.8 8815.4 10081.8 10804.3 9568.1 9164.4 9883.5 10145.8 10531.9 True False 9712.425805046812 9499.970780837872 9562.526577586852 9359.907236774005 9373.689148321853 10716.313362954244 9932.21928136522 8981.608852667277 9468.130865797084 9505.192456506938 9236.543067214798 1.051521736473158 1.0285201629772196 1.0352928046780983 1.0133560974773224 1.0148482045835803 1.1602082386203456 1.075317811987445 0.9723993909093098 1.0250729950477153 1.0290854908960165 1.0 13.173137284251448 -8.249193260334064 24.927616253123553 1.0092128014920505 1.053439256223165 0.24087564921479088 0.040468530526152714 912.9463971535781 1858351.786164822 0.0067192332302251825 0.008641825228916546 5.633868937895503e-09 8.249193260334064 0.04422645473111442 TYVDPHTY(ph)EDPNQAVLK ddPTM_A549_MK2206_60min_R1 2 TYVDPHTYEDPNQAVLK 17 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 TYVDPHT(0.049)Y(0.951)EDPNQAVLK;TYVDPHT(0.032)Y(0.968)EDPNQAVLK 150.39 4.3076e-17 11247300.0 5892.700000000001 5740.4 5135.700000000001 5026.5 6893.4 5102.3 4645.5 4854.799999999999 7783.099999999999 7389.5 8178.0 True False 6887.243697317029 6032.561840769189 5864.019484942136 6257.992725648157 5879.389991631759 5642.221999367374 5489.527217674009 5542.98276720145 6020.240277056752 5720.206817769365 6147.176898682208 1.120391329358599 0.9813548463299324 0.9539369993076376 1.018027108832626 0.9564374164817259 0.9178558047641214 0.893015982483084 0.9017119335527368 0.9793504199215957 0.9305420865626344 1.0 12.585708287087112 -5.26347508577833 4.560931258261503 0.970541615329098 1.1297725290523437 0.5449813525150761 0.041343048078549445 0.12855582527957612 6.908872278715855 0.006274217350230943 0.0651876864990182 5.451611691155807e-06 5.26347508577833 0.15923091372324572 TYVENSKS(ph)PK ddPTM_A549_MK2206_60min_R1 1 TYVENSKSPK 10 1 O95171-2;O95171;O95171-3 O95171-2 SCEL Sciellin 1 T(0.011)Y(0.002)VENS(0.087)KS(0.899)PK 40.577 0.027297000000000002 2668400.0 1366.6 1651.3 1335.8 1126.2 1908.0 1445.7 995.57 1472.1 2182.0 2131.9 2140.8 True False 1597.2486698378418 1735.3441167274336 1525.2365262740627 1402.1190505570394 1627.3357275123158 1598.6830144220078 1176.4521821331857 1680.7746831171742 1687.7804839379967 1650.302309331146 1609.1802769257604 0.9925852887591232 1.0784025516660578 0.9478344646306087 0.8713250284397602 1.011282421768952 0.9934766398431089 0.73108787063978 1.044491227749939 1.0488448734671276 1.0255546460486993 1.0 10.652110245314844 VAAAAGSGPS(ph)PPGS(ph)PGHDR ddPTM_A549_MK2206_60min_R1 2 VAAAAGSGPSPPGSPGHDR 19 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 2 VAAAAGS(0.03)GPS(0.97)PPGS(0.999)PGHDR;VAAAAGS(0.012)GPS(0.988)PPGS(1)PGHDR 74.251 0.00017441 21083000.0 3366.1 4077.8 3076.7 3322.7 5378.6 3533.2 3618.1 3915.3 5948.299999999999 6043.6 6424.799999999999 True False 3934.215386756298 4285.342602307956 3513.0223239911747 4136.761649161669 4587.415064988338 3907.0808788516524 4275.461936555017 4470.305765103368 4601.019547483218 4678.346562537511 4829.3448445406475 0.8146478483937107 0.8873548566639095 0.727432485580831 0.8565885813348136 0.9499042235872222 0.8090291757210977 0.885308892652019 0.9256547024503423 0.9527212687419618 0.968733174609837 1.0 12.237611769035317 -8.275150732742716 0.44187743456945355 0.998667568637707 0.8162427728168159 0.5635912395266292 0.05151309811719787 0.447047308994396 0.20686198655965002 0.01957875173861342 0.027629412207139995 5.307002195020873e-09 8.275150732742716 -0.1824247958208911 VAAAAGSGPS(ph)PPGS(ph)PGHDR ddPTM_A549_PD325901_60min_R1 1 VAAAAGSGPSPPGSPGHDR 19 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 2 VAAAAGS(0.087)GPS(0.923)PPGS(0.991)PGHDR 45.878 0.010051000000000001 11373000.0 2794.0 3034.1 2983.4 3274.6 3527.0 2935.9 2830.2 3559.9 4129.0 3538.3 3866.5 True False 3077.6448231659124 3289.7942551748765 3185.8714646416024 3476.8646048438145 3279.275687489454 2911.9910037945433 2937.904809744863 3488.895001812476 3955.4724889842796 3314.891134149943 3390.945011762933 0.9076068212518322 0.9701703341584212 0.9395231870732359 1.0253379493866261 0.967068376548099 0.8587550059623691 0.8663970661728493 1.0288857500519064 1.166480870454414 0.9775714801186204 1.0 11.727471674186107 -8.511984139380974 23.292238965001772 1.0796195152838286 0.9378826203058075 0.3757711300101093 0.06475926216960326 148.33925696127972 317144.04306430893 0.012373259725180106 0.014499544746374328 3.076209157154905e-09 8.511984139380974 -0.1417368949780211 VAAAAGSGPS(ph)PPGS(ph)PGHDRER ddPTM_A549_MK2206_60min_R1 3 VAAAAGSGPSPPGSPGHDRER 21 1 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 2 VAAAAGS(0.46)GPS(0.552)PPGS(0.988)PGHDRER;VAAAAGS(0.012)GPS(0.99)PPGS(0.999)PGHDRER;VAAAAGS(0.101)GPS(0.901)PPGS(0.998)PGHDRER 78.717 5.6515e-05 66646000.0 2795.25 3187.85 3007.5699999999997 2678.7 3323.12 3117.92 2842.96 2664.67 4258.3 4169.6 4157.9400000000005 True False 3267.019862698834 3350.097948591745 3434.088650491154 3334.981620251414 2834.293450110445 3447.856224892208 3359.4890321296994 3042.395132709625 3293.8018491077787 3227.684464087035 3125.4087446938956 1.045309631338735 1.071891142008005 1.0987646516063905 1.0670545495571793 0.9068552889033519 1.1031696992419764 1.0748958957234662 0.9734391182832629 1.0538787461639278 1.0327239499687124 1.0 11.609829164158652 -11.630710350592233 0.006409373849129357 1.25110430420084e-05 2.025699924186696 0.06513441087274141 0.05409284535888081 20224.15551932188 21.05726511523559 3478.1684435999955 3181.910450093764 2.340397628687741e-12 11.630710350592233 2.025687413143654 VAAAAGSGPS(ph)PPGS(ph)PGHDRER ddPTM_A549_PD325901_60min_R1 4 VAAAAGSGPSPPGSPGHDRER 21 1 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 2 VAAAAGS(0.003)GPS(0.997)PPGS(1)PGHDRER;VAAAAGS(0.247)GPS(0.753)PPGS(1)PGHDRER;VAAAAGS(0.022)GPS(0.978)PPGS(1)PGHDRER;VAAAAGS(0.009)GPS(0.992)PPGS(0.999)PGHDRER 101.92 8.553700000000001e-13 95637000.0 6961.6 7010.2 7960.5 6865.599999999999 8693.5 7023.400000000001 6651.9 7960.5 7830.999999999999 8100.400000000001 9254.7 True False 7668.336507140947 7600.974156299042 8500.74740037524 7289.67251909109 8082.89855094686 6966.203759000848 6905.041694559344 7801.721582608564 7501.890303036058 7588.939361577092 8116.430570376937 0.9447917333425573 0.9364922289905134 1.0473504734212806 0.8981377288800672 0.9958686248666426 0.8582841556516054 0.8507485691753618 0.9612256908945926 0.9242844176375011 0.9350094596108462 1.0 12.98662968564511 -10.731678980611417 0.9539145173569443 1.0004861591962622 0.9349076735422921 0.0 0.05674895924931101 0.8443434508746981 1.3478372386693012 0.038077424795152776 0.00951317571867269 1.8549022131393127e-11 10.731678980611417 -0.06557848565397006 VAAETQS(ph)PSLFGSTK ddPTM_A549_MK2206_60min_R1 2 VAAETQSPSLFGSTK 15 0 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 VAAETQS(0.978)PS(0.022)LFGSTK;VAAETQS(0.927)PS(0.073)LFGSTK 156.0 1.9152999999999997e-19 9545400.0 4770.4 5066.0 5199.700000000001 5665.6 6768.4 5267.4 5470.7 5167.5 7026.700000000001 7204.3 6873.700000000001 True False 5575.5268949176325 5323.837761364488 5937.0956473029255 7053.672254338452 5772.77732604526 5824.792771782859 6464.655376112195 5900.008949805035 5435.163669334157 5576.84362639635 5166.770585530921 1.0791125331810545 1.0303994871135598 1.1490921745063019 1.365199429231797 1.1172892681187367 1.127356571258393 1.2511984554173712 1.1419142483948255 1.0519460036710062 1.079367379309196 1.0 12.335047111435369 -8.832053533508038 2.6971434658333835 1.0211572330427818 1.161934824382638 0.25601369872638313 0.08571323820473398 0.22405220892614194 3.1622779984862635 0.01599540154529146 0.016972884322462498 1.4721310283433733e-09 8.832053533508038 0.14077759133985612 VAAETQS(ph)PSLFGSTK ddPTM_A549_PD325901_60min_R1 1 VAAETQSPSLFGSTK 15 0 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 VAAETQS(0.961)PS(0.039)LFGSTK 176.23 1.4991999999999999e-27 7203300.0 4110.7 3795.4 3532.3 4191.7 4317.2 3822.2 4145.1 3949.5 4903.5 4284.7 4747.5 True False 4528.015237862602 4115.25167795746 3772.0231194454445 4450.611788958594 4013.9747655314636 3791.073270446373 4302.844048785756 3870.7241241771862 4697.4229473805835 4014.163310768521 4163.587596882069 1.0875273144855742 0.9883908005296187 0.9059550283678791 1.0689367487527979 0.9640663663561098 0.9105304457351502 1.0334462644686448 0.9296607875083027 1.1282152321950139 0.9641116506770638 1.0 12.023611461513134 -8.755545572329432 24.999976924390033 1.0605460817688888 0.9845622358125645 0.030942712584185572 0.06925826687805753 168.30110275297454 713889.1569819431 0.01169685700449619 0.013089199418588417 1.7557166498694585e-09 8.755545572329432 -0.07598384595632424 VAAETQSPS(ph)LFGSTK ddPTM_A549_PD325901_60min_R1 1 VAAETQSPSLFGSTK 15 0 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 VAAETQS(0.343)PS(0.657)LFGSTK 171.91 2.8931999999999997e-27 4618900.0 4634.3 4177.6 4293.0 4021.6 5045.8 4650.3 5218.5 4832.3 4779.1 5280.9 4736.3 True False 5104.770724408657 4529.661013288473 4584.348795906144 4270.005098283724 4691.400415065009 4612.4294986020495 5417.092873172773 4735.915985633986 4578.2510467679285 4947.46307275597 4153.765125879418 1.2289502583100185 1.0904952196423174 1.1036610537615714 1.0279842429414436 1.1294332425865714 1.1104213548004898 1.3041403904670437 1.1401501630719473 1.1021930484811995 1.1910791589855514 1.0 12.0202039261434 -9.936624523781406 0.8874103087236008 1.0113562018802116 1.1360977414609132 0.0 0.08808873821238006 0.4522122356431442 0.7269312986919944 0.028005490172706624 0.014405273924686556 1.1571122096704284e-10 9.936624523781406 0.12474153958070167 VAALQNLVK ddPTM_A549_PD325901_60min_R1 1 VAALQNLVK 9 0 Q14974;J3KTM9;Q14974-2 Q14974 KPNB1 Importin subunit beta-1 0 141.78 0.00010752 1698900.0 1869.9 2249.5 1874.8 1979.4 2294.7 2314.7 2063.5 2339.7 2305.2 2502.5 2763.1 False True 2059.7308714523765 2439.073259620936 2002.035202088246 2101.663042456434 2133.5281882852414 2295.84985063634 2142.0276216905268 2293.032848040857 2208.320460548938 2344.491722920679 2423.2562167340375 0.8499847672849035 1.0065271855190847 0.8261756178579022 0.8672888272990658 0.8804385493997497 0.947423485301356 0.8839459925444703 0.9462609988188991 0.9113029176606093 0.9674964235026232 1.0 11.242731237148126 -11.362198785812492 0.2927924756961198 1.0712859331656512 0.8904127623952873 0.3153589638873765 0.047929236280345996 4.391867748847538 0.3502702030695442 0.27465245048660186 0.021585135753684908 4.343113851191605e-12 11.362198785812492 -0.1808731707703639 VAASGAQDPEKS(ph)PDRLK ddPTM_A549_MK2206_60min_R1 4 VAASGAQDPEKSPDRLK 17 2 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 VAAS(0.001)GAQDPEKS(0.999)PDRLK;VAAS(0.01)GAQDPEKS(0.99)PDRLK;VAASGAQDPEKS(1)PDRLK;VAAS(0.001)GAQDPEKS(0.999)PDRLK 98.26899999999999 3.9868e-07 171939000.0 10786.7 10981.0 10624.7 9862.0 13293.2 9485.0 10461.3 9845.4 15554.3 14984.0 15504.7 True False 12607.231250504798 11539.885996356781 12131.442222416568 12278.190442722003 11337.787889395553 10488.696404366563 12361.982796739463 11241.01560027296 12031.27588511311 11599.103993160035 11654.45508204916 1.0817520992399856 0.9901695030024317 1.0409274510913933 1.053519049692298 0.9728286573311046 0.8999731287756075 1.0607087770049477 0.964525198401339 1.0323327689206465 0.9952506497730315 1.0 13.50859393066541 -5.252187420876543 23.425325403143027 1.0081629282339233 1.0817521945087287 0.19830694053881603 0.044610291206986 641.6935376013224 1624637.0126429228 0.0058234614894378455 0.09465300822359171 5.595160888100386e-06 5.252187420876543 0.07358926627480544 VAASGAQDPEKS(ph)PDRLK ddPTM_A549_PD325901_60min_R1 3 VAASGAQDPEKSPDRLK 17 2 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 VAASGAQDPEKS(1)PDRLK;VAASGAQDPEKS(1)PDRLK;VAASGAQDPEKS(1)PDRLK 132.76 7.4075e-13 165272000.0 19607.9 19928.300000000003 19548.0 18597.2 23300.9 20054.0 23444.199999999997 22585.4 22711.7 22713.2 24565.6 True False 21598.479573426932 21607.727779374927 20874.64483167327 19745.906806694355 21664.325167741143 19890.686872882514 24336.381860158494 22134.91647909646 21757.206231064258 21279.08467574104 21544.18693416876 1.0025200597926518 1.0029493266745375 0.9689223777837908 0.9165306106482785 1.0055763642387379 0.9232507559306488 1.1296031701972171 1.0274194401827628 1.0098875533129381 0.9876949518105382 1.0 14.395011032503353 VAASMPLS(ph)PGGQMEEVAGAVK ddPTM_A549_MK2206_60min_R1 4 VAASMPLSPGGQMEEVAGAVK 21 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VAAS(0.019)MPLS(0.981)PGGQMEEVAGAVK;VAAS(0.014)MPLS(0.986)PGGQMEEVAGAVK;VAAS(0.003)MPLS(0.997)PGGQMEEVAGAVK;VAAS(0.007)MPLS(0.993)PGGQMEEVAGAVK 69.03 0.00059548 3867300.0 1159.0900000000001 1014.62 1087.6399999999999 1024.03 1612.8500000000001 1474.5900000000001 1219.27 1066.18 2139.1 1878.77 1950.1000000000001 True False 1354.7160549702503 1066.2598242075865 1241.8837067201096 1274.917395970453 1375.6019015294764 1630.630135046378 1440.7955765134855 1217.3142800393102 1654.5972654407738 1454.354552137566 1465.8363499780098 0.9241932463951883 0.7274071380639334 0.8472185225443073 0.8697542505270655 0.9384416627068315 1.1124230444079521 0.9829170742935254 0.8304571516851605 1.1287735260935476 0.9921670670531427 1.0 10.51750833066182 -6.8780131817086065 2.2627561982971467 1.0398585523699655 0.8275165831503635 0.4062827795924502 0.08831409551802524 0.18879961085504016 1.9628613892610496 0.013982142396332838 0.029663522251687807 1.3243013393828048e-07 6.8780131817086065 -0.21234196921960202 VAASMPLS(ph)PGGQMEEVAGAVK ddPTM_A549_PD325901_60min_R1 2 VAASMPLSPGGQMEEVAGAVK 21 0 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VAAS(0.001)MPLS(0.999)PGGQMEEVAGAVK;VAAS(0.001)MPLS(0.999)PGGQMEEVAGAVK 94.01 1.7012000000000001e-06 3144200.0 1349.1 1092.63 1334.67 1993.4699999999998 1711.17 1976.35 1710.04 1551.85 1471.27 1693.87 1831.1 True False 1486.0596388450722 1184.7097646853192 1425.2487322227012 2116.6021144011465 1590.9833224160266 1960.2552608567546 1775.116507969793 1520.8971343472258 1409.4376383792448 1586.9187591223367 1605.8863082992648 0.9253828438321411 0.7377295382386079 0.8875153395710371 1.318027374330604 0.9907197752379984 1.2206687675996124 1.1053811834598388 0.9470764689176235 0.8776696277284589 0.9881887347324009 1.0 10.649154042860502 -2.007930635212603 16.781091487326457 0.9765099355686834 0.21053624308758323 0.0 0.15722925444277333 0.0 0.0 0.021317298913298935 0.0 0.009819047586802809 2.007930635212603 -0.7659736924811001 VAASPKS(ph)PTAALNESLVECPK ddPTM_A549_MK2206_60min_R1 2 VAASPKSPTAALNESLVECPK 21 1 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 VAAS(0.003)PKS(0.98)PT(0.017)AALNESLVECPK;VAAS(0.017)PKS(0.864)PT(0.119)AALNESLVECPK 193.19 7.0176e-46 17547300.0 4434.5 5502.3 4672.700000000001 4253.9 5427.1 3968.5 3694.3 3254.2 4961.0 6092.0 5235.6 True False 5182.93518688417 5782.343567776513 5335.359122863313 5296.105690964827 4628.780779235898 4388.444035922899 4365.506490206245 3715.4928155695297 3837.3414210890955 4715.812968922249 3935.456024790969 1.3169846529181992 1.4692944175595612 1.3557155992225067 1.3457412959521327 1.1761739300547145 1.1151043254653037 1.1092758914611727 0.9441073136541723 0.9750690636399413 1.1982888232559348 1.0 11.942315103771039 -7.120855513669187 0.9167499196123643 0.9855780517755188 1.4062689292520656 0.7649032367695207 0.0801194962120767 0.09417991929137279 0.15420789699813164 0.007757106787354728 0.02046814948593406 7.570847292138736e-08 7.120855513669187 0.42069087747654677 VAASPKS(ph)PTAALNESLVECPK ddPTM_A549_PD325901_60min_R1 1 VAASPKSPTAALNESLVECPK 21 1 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 VAAS(0.002)PKS(0.499)PT(0.499)AALNESLVECPK 252.11 1.2823999999999999e-98 20053000.0 3574.9 3822.5 4479.4 4511.6 4238.3 3753.8 4607.6 4675.2 3659.4 5723.3 5816.2 True False 3937.8212162977143 4144.635490064916 4783.399020820402 4790.2712854129795 3940.61642934124 3723.230297368423 4782.944739375466 4581.9494683765515 3505.6081439062905 5361.929861255511 5100.844271929542 0.77199400851501 0.812539114921281 0.9377661355285688 0.9391134153564192 0.7725419987877002 0.7299243221083485 0.9376770754787578 0.8982727611567127 0.6872603743654759 1.0511847795006701 1.0 12.316520340789124 -11.131846079149947 1.5071837330452065 0.9996445320304734 0.8170118156062419 0.40764923862479985 0.08676692647169533 0.3829032038818733 1.5626358372054425 0.06901740252861242 0.014968699285220778 7.381658014373793e-12 11.131846079149947 -0.1826327164242315 VAASPKSPT(ph)AALNESLVECPK ddPTM_A549_MK2206_60min_R1 2 VAASPKSPTAALNESLVECPK 21 1 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 VAAS(0.002)PKS(0.39)PT(0.609)AALNESLVECPK;VAAS(0.024)PKS(0.371)PT(0.605)AALNESLVECPK 183.31 9.6736e-45 20367500.0 5495.5 4930.5 4857.299999999999 4283.299999999999 4512.4 3068.8999999999996 3510.5 3496.8 5216.5 5682.200000000001 5784.4 True False 6423.006047924671 5181.441390131783 5546.138178672708 5332.708692284642 3848.6319375401354 3393.648961029051 4148.312409351981 3992.482108500873 4034.971079038756 4398.587073540711 4347.973838681504 1.4772411900878428 1.1916910226173354 1.2755684335843518 1.2264813198374147 0.8851552654942397 0.7805127369529329 0.9540794317681384 0.91823968051095 0.9280118116493395 1.0116406484346636 1.0 12.08612754450339 -6.670586415387882 4.711680254928767 0.9418716695921862 1.2940521613315754 0.8041003514212695 0.08740404396172514 0.07317985863596907 2.832545980099507 0.012549393083342167 0.026544259630760608 2.135077208711438e-07 6.670586415387882 0.35218049173938926 VAASPKSPT(ph)AALNESLVECPK ddPTM_A549_PD325901_60min_R1 1 VAASPKSPTAALNESLVECPK 21 1 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 VAAS(0.001)PKS(0.285)PT(0.695)AALNES(0.019)LVECPK 195.09 9.330999999999998e-56 19130000.0 3801.3 4571.9 4920.7 4806.9 4624.0 4728.0 4736.7 5662.4 4160.8 5845.7 6429.4 True False 4187.205177630844 4957.190058084443 5254.648292572882 5103.811295738022 4299.226191934002 4689.496735563402 4916.957710521698 5549.458989933132 3985.936045571758 5476.601504366595 5638.62455932461 0.7425933636078768 0.8791488076443612 0.9319024945335747 0.9051518224063764 0.7624600905240904 0.8316738747587595 0.8720136726234965 0.9841866454392633 0.7068986423258494 0.9712655004330661 1.0 12.461127570789014 -11.151956281979514 1.5414853257462278 0.9998089394032488 0.8323453412193961 0.2962023276955108 0.08046288907470615 0.38128239784506984 1.6275517822429448 0.06430192484437058 0.013774771016824899 7.0476401008656264e-12 11.151956281979514 -0.1674635981838527 VAAVGPYIQS(ph)STMPR ddPTM_A549_PD325901_60min_R1 1 VAAVGPYIQSSTMPR 15 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VAAVGPY(0.019)IQS(0.419)S(0.281)T(0.281)MPR 46.70399999999999 0.010734 4228400.0 2290.0 2646.6 2765.4 3123.8 3302.6 3600.8 2705.0 3085.5 3317.2 3156.5 2926.3 True False 2522.4791141911023 2869.6382702435094 2953.076673701108 3316.7500313354635 3070.63676935148 3571.4762786414353 2807.940255232796 3023.957281972075 3177.789619873737 2957.1980513083413 2566.383651344075 0.9828924497979953 1.1181641796777395 1.1506762335220273 1.2923827774535597 1.1964839192079935 1.391637714326527 1.094123341131094 1.178295100340262 1.238236386913334 1.1522821421339664 1.0 11.32552114118416 -10.842214270418355 1.0016413111270308 0.9959760708458593 1.190048131514078 0.06084761419076168 0.110130118910817 0.5489788579807285 0.9439597750953481 0.07814075513211186 0.017602015159527515 1.4380888848410555e-11 10.842214270418355 0.1940720606682188 VAAVGPYIQSS(ph)TMPR ddPTM_A549_MK2206_60min_R1 1 VAAVGPYIQSSTMPR 15 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VAAVGPY(0.002)IQS(0.099)S(0.449)T(0.449)MPR 53.751000000000005 0.0061007 3231800.0 2009.0 1840.3 1908.8 1962.0 2385.9 1833.5 1612.6 1648.9 2581.3 2690.7 2953.9 True False 2348.0700846657564 1933.963409443164 2179.4965424104903 2442.6900880775274 2034.9372705826195 2027.5197530212024 1905.588546167499 1882.6366245444651 1996.6396714890711 2082.86900122769 2220.365106507382 1.0575153058315052 0.87101144031455 0.9815937640268643 1.1001299204885548 0.9164876824170423 0.9131470077056274 0.8582320720960058 0.8478950687104964 0.899239348356438 0.9380750017748334 1.0 11.116581210804181 VAAVGPYIQSST(ph)MPR ddPTM_A549_MK2206_60min_R1 1 VAAVGPYIQSSTMPR 15 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VAAVGPY(0.001)IQS(0.213)S(0.213)T(0.572)MPR 71.806 0.00064299 5103700.0 1200.2 1395.1 1628.0 1463.4 2363.2 1593.6 1245.8 1598.6 2354.4 2147.7 2308.5 True False 1402.764417927249 1466.1046310461102 1858.8748800525348 1821.9330656945217 2015.5764105121111 1762.2336942539323 1472.1457341036025 1825.206445507177 1821.132159204227 1662.5330783575705 1735.2357386412157 0.8083999117178685 0.8449022794990092 1.0712520717837077 1.0499628523794668 1.1615576867327648 1.0155586673392616 0.8483837102481379 1.0518492703109108 1.049501297518384 0.9581021421673949 1.0 10.760915956610111 -5.7062571884602695 6.403403929645051 1.026859371445642 0.8216582148927977 0.5133708213201594 0.07369633346161086 0.11245140920787444 9.513682702002924 0.00976631220786826 0.038279127395505805 1.9667212557621635e-06 5.7062571884602695 -0.20520115655284432 VAAYDKLEK ddPTM_A549_MK2206_60min_R1 1 VAAYDKLEK 9 1 P35579 P35579 MYH9 Myosin-9 0 51.276 0.026664999999999998 3011400.0 2448.4 2676.9 3088.6 2689.3 3386.3 2744.8 2420.9 2740.6 3832.5 3219.6 3525.3 False True 2861.6300623671673 2813.1427760356496 3526.609922930134 3348.1786207272658 2888.179755804487 3035.2529141492178 2860.746193362829 3129.0884427354963 2964.4448692449 2492.2901238906866 2649.870716669649 1.0799130857084442 1.0616151038384245 1.3308611249390947 1.2635252730122806 1.0899323267492627 1.1454343395152184 1.0795795339623995 1.1808457005284119 1.1187130189395078 0.9405327241862541 1.0 11.371706259066443 -10.289004244825831 0.38833544616645876 0.9673967685104123 1.1682565811277064 0.41960496176802287 0.08072269655124834 1.631965749494588 0.3941540527232739 0.13280961585512274 0.029047984529101 5.140386273069683e-11 10.289004244825831 0.20085981261729402 VAAYDKLEK ddPTM_A549_PD325901_60min_R1 1 VAAYDKLEK 9 1 P35579 P35579 MYH9 Myosin-9 0 74.376 0.0021807 4815700.0 4298.7 4331.2 4387.8 4577.4 6137.7 5579.6 5328.8 5764.0 5623.6 5092.8 4709.9 False True 4735.100859464317 4696.205424347724 4685.582493984857 4860.135601970335 5706.609125915515 5534.161587510482 5531.590400031246 5649.032498229479 5387.259648595784 4771.239738857313 4130.612158516032 1.1463436114915846 1.1369272263109031 1.134355469400498 1.1766138808143132 1.3815407757782994 1.339792111951438 1.3391696406613327 1.3676017697722935 1.304227906628546 1.1550926486817474 1.0 12.012139890183292 -10.718399995234861 1.0054901457842613 1.0020157751609866 1.2611207558344868 0.2843642122519535 0.10117361635859738 0.3796457408987336 0.6902323272813305 0.0685256142560125 0.018346635458979278 1.9124936628283503e-11 10.718399995234861 0.2591049806735002 VADAKGDS(ph)ES(ph)EEDEDLEVPVPSR ddPTM_A549_PD325901_60min_R1 2 VADAKGDSESEEDEDLEVPVPSR 23 1 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 2 VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR 196.8 4.1081999999999994e-61 616160000.0 36128.0 36714.0 37006.0 36996.0 43257.0 42350.0 40074.0 41413.0 38878.0 43065.0 44647.0 True False 39795.6879639721 39808.01762779419 39517.44969515559 39281.15889598779 40218.777548548715 42005.11564109776 41599.03799933423 40586.985227130004 37244.092861886864 40345.86855048114 39155.702040651675 1.0163446417754427 1.0166595298550714 1.0092386966814781 1.0032040507205278 1.0271499539656663 1.0727713577319544 1.0624005146465225 1.0365536336187349 0.951179289882731 1.0303957392615213 1.0 15.256934794518257 -8.747870462418627 24.995085491091977 0.9769457756226693 1.0308130480282103 0.19648089960403092 0.027788678407647528 157.02529755128361 289253.66399228567 0.004767515741187628 0.0053917547723880445 1.7870205123063418e-09 8.747870462418627 0.05386727240554101 VADAKGDSES(ph)EEDEDLEVPVPSR ddPTM_A549_MK2206_60min_R1 2 VADAKGDSESEEDEDLEVPVPSR 23 1 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 VADAKGDS(0.126)ES(0.874)EEDEDLEVPVPSR;VADAKGDS(0.013)ES(0.987)EEDEDLEVPVPSR 189.24 1.771e-50 93051000.0 12262.3 14221.5 12153.9 10427.0 16140.2 12454.400000000001 12723.7 12781.8 18488.5 18272.6 18421.300000000003 True False 14331.876455548494 14945.313605062183 13877.50577682463 12981.615468085813 13765.99796079366 13772.316341438365 15035.431591759523 14593.659292620807 14300.884270067674 14144.806969128156 13846.782807984171 1.035032949840494 1.0793347315626696 1.0022187802947804 0.9375185303405282 0.9941658038325025 0.9946221105957647 1.0858429571878578 1.0539386292826072 1.0327947270048654 1.02152298951148 1.0 13.757263195814906 VADAKGDSES(ph)EEDEDLEVPVPSR ddPTM_A549_PD325901_60min_R1 2 VADAKGDSESEEDEDLEVPVPSR 23 1 P13861;P13861-2 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 VADAKGDS(0.011)ES(0.989)EEDEDLEVPVPSR;VADAKGDS(0.022)ES(0.978)EEDEDLEVPVPSR 217.07 2.8509999999999997e-74 115157000.0 10741.7 11760.5 11187.0 12232.9 13673.1 12639.3 12142.0 14260.7 12874.3 13209.2 14718.3 True False 11832.189476378404 12751.598608478345 11946.217092895886 12988.498450068366 12712.74862563426 12536.369731346562 12604.070454357341 13976.259151197275 12333.23794258424 12375.16885770382 12908.042406990915 0.9166525103737003 0.98788012979971 0.9254863530992035 1.006233016637277 0.9848703796285264 0.9712061160069433 0.9764509642090311 1.0827559060100251 0.9554692767281764 0.9587177100535017 1.0 13.655982602203009 -3.180464898286715 0.6465063177293652 0.9866198484366289 4.6194882417159855e-10 0.2253212527704762 0.03738294919555256 47.11082697461022 1.4506745738796367 0.006019391912271937 59.71879564427142 0.0006599865753128067 3.180464898286715 -0.98661984797468 VADNS(ph)FDAK ddPTM_A549_MK2206_60min_R1 2 VADNSFDAK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAK;VADNS(1)FDAK 117.21 0.00018173 221520000.0 14439.9 16905.2 14141.8 14460.599999999999 19653.6 15549.2 16346.3 16401.9 21654.6 19274.7 22269.0 True False 16877.002098340014 17765.602472052695 16147.3198886529 18003.44764916099 16762.581474966482 17194.606023276396 19316.211120065596 18726.919553712094 16749.867675290454 14920.531883139472 16738.992706866466 1.0082447847305014 1.0613304386449196 0.9646530213272119 1.0755394882139973 1.0014092107280947 1.027218681816083 1.1539649642204537 1.1187602433227757 1.0006496787838093 0.8913637842149816 1.0 14.030925093785836 VADNS(ph)FDAK ddPTM_A549_PD325901_60min_R1 2 VADNSFDAK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAK;VADNS(1)FDAK 106.79 0.0005126 376190000.0 19799.8 19694.2 19457.9 19468.3 21790.2 19703.1 20823.3 20171.7 18991.4 19629.9 22519.9 True False 21809.86112015762 21353.89935080091 20778.43010385796 20670.812675282723 20259.73152410907 19542.64448614198 21615.742076446975 19769.35961910747 18193.257502372504 18390.464763940323 19750.095065408022 1.1042914501387513 1.0812048893983264 1.0520673462605783 1.046618388763471 1.0258042534485652 0.9894962237609991 1.0944626851091266 1.0009754157453747 0.9211731610465869 0.9311582907846824 1.0 14.269571977146159 -7.239540330732341 0.5470577779607045 0.9652559854427777 1.0902333732901275 0.5629667152600335 0.03857372168668891 0.6284193785858444 0.3465270822737559 0.010535551246317247 0.03428203187437938 5.760493212884525e-08 7.239540330732341 0.1249773878473498 VADNS(ph)FDAKR ddPTM_A549_MK2206_60min_R1 2 VADNSFDAKR 10 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAKR;VADNS(1)FDAKR 122.46 1.5131e-05 486620000.0 22744.0 26324.0 25311.0 21386.0 32239.0 22829.0 20678.5 21513.0 34829.0 33786.0 35006.0 True False 26582.631162587342 27663.779161105173 28900.48039865462 26625.570960054032 27496.68580674506 25244.74962733626 24435.51578316048 24562.533630799375 26940.287110484183 26153.719134603914 26313.044083549667 1.0102453778506841 1.0513332882834319 1.0983328385301707 1.01187726040028 1.044983078333205 0.9594005751359919 0.9286464806417827 0.9334736624469583 1.0238377218896788 0.9939450202553585 1.0 14.683490539121303 -7.225329305069595 21.334167784200574 0.9949116990725538 1.0451033603299467 0.4058902812922639 0.03751551121913703 118.21469344044908 69841.44825382237 0.00633173916602017 0.01096614128841995 5.9521065214883985e-08 7.225329305069595 0.05019166125739283 VADNS(ph)FDAKR ddPTM_A549_PD325901_60min_R1 4 VADNSFDAKR 10 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR 143.98 1.8540000000000003e-08 618876600.0 34007.5 33895.5 33568.1 34796.1 38553.2 36441.4 37804.6 37214.3 37064.3 36436.7 39607.5 True False 37459.916365001685 36751.992741267575 35846.233127383464 36945.3760693232 35845.356233319646 36144.633320507666 39243.274740470915 36472.03159244641 35506.61636557523 34136.080543673896 34736.028592629096 1.0784167874893618 1.058036690730565 1.0319611820848729 1.0636039169187845 1.031935937573645 1.0405516918585642 1.1297570945919317 1.0499770143609821 1.0221841069393192 0.98272836379797 1.0 15.084145198156232 -8.846223402844396 2.791325592935733 1.0091497847447932 1.0605487606042179 0.4880849673768036 0.02696313318104124 0.18181002376488906 2.735702656127665 0.0048296700932717795 0.005106110146439498 1.424874443852927e-09 8.846223402844396 0.051398975859424656 VADPDHDHTGFLT(ph)EY(ph)VATR ddPTM_A549_MK2206_60min_R1 4 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 2 VADPDHDHT(0.001)GFLT(0.999)EY(0.996)VAT(0.004)R;VADPDHDHT(0.002)GFLT(0.998)EY(0.996)VAT(0.004)R;VADPDHDHT(0.02)GFLT(0.975)EY(0.829)VAT(0.176)R;VADPDHDHT(0.004)GFLT(0.996)EY(0.987)VAT(0.013)R 140.17 4.454700000000001e-18 16623800.0 3109.56 2823.1800000000003 2752.62 2561.37 4318.34 3138.9700000000003 2953.42 3529.7599999999998 5451.83 3687.42 3782.29 True False 3634.377706557121 2966.8678032232515 3142.982906836738 3188.905764984268 3683.117906470409 3471.133721920349 3490.018184312298 4030.1142894366367 4216.999209783546 2854.429260975586 2843.0430071064693 1.2783407417589645 1.0435536134371761 1.105499599893684 1.1216523130368694 1.2954844148555222 1.2209219886030231 1.2275643300465908 1.417535464417163 1.483269580953484 1.0040049530874686 1.0 11.47322020769087 -6.750000539922391 24.24199284617631 1.2509498608309852 1.1282993822837661 0.08627671522613123 0.14751610129144108 314.7395869384205 667010.9024837728 0.026547629201377848 0.05485594173132651 1.77827719925266e-07 6.750000539922391 -0.12265047854721911 VADPDHDHTGFLT(ph)EY(ph)VATR ddPTM_A549_PD325901_60min_R1 2 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 2 VADPDHDHTGFLT(1)EY(0.997)VAT(0.003)R;VADPDHDHT(0.002)GFLT(0.997)EY(0.958)VAT(0.043)R 166.35 1.2787e-27 14911400.0 2063.27 2433.25 1772.58 2781.58 2913.01 2555.8199999999997 2763.92 3139.28 4317.24 6109.66 6478.889999999999 True False 2272.7316515009065 2638.3085169916176 1892.8779381894524 2953.3918791734723 2708.4102269389446 2535.0062492994216 2869.1024880750592 3076.6645976824807 4135.801416406513 5723.895024918898 5682.0276030675695 0.39998602792318744 0.4643251848279068 0.3331342384129813 0.519777812691198 0.47666263104331785 0.44614465581456203 0.5049434266257542 0.5414730115041108 0.7278742211976775 1.0073683946605128 1.0 12.472190124762573 -9.212165815045246 0.4962804134550861 0.9962962322869928 0.4104835005336941 0.9460538257841509 0.05082947840048347 0.12189679329026074 0.07102154877932602 0.02630129497420947 0.0174631323246295 6.135277135651435e-10 9.212165815045246 -0.5858127317532987 down VADPDHDHTGFLT(ph)EYVATR ddPTM_A549_MK2206_60min_R1 6 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHT(0.001)GFLT(0.998)EY(0.001)VATR;VADPDHDHT(0.003)GFLT(0.995)EYVAT(0.002)R;VADPDHDHT(0.001)GFLT(0.998)EY(0.001)VATR;VADPDHDHT(0.002)GFLT(0.998)EYVATR;VADPDHDHT(0.003)GFLT(0.996)EY(0.001)VATR;VADPDHDHT(0.047)GFLT(0.953)EYVATR 214.92 2.1102999999999997e-66 161424100.0 6813.99 7291.110000000001 7598.28 6827.41 9736.597 7088.219999999999 6609.601000000001 6952.630000000001 10026.09 9282.77 9549.990000000002 True False 7964.024925939082 7662.196356151248 8675.830358480078 8500.125756494079 8304.356479292057 7838.290735620363 7810.479945638866 7938.186594036379 7755.196623375761 7185.785809836239 7178.463916684528 1.1094330233281129 1.0673866226926914 1.2085914840799434 1.1841148545356175 1.1568431039948082 1.0919175504110614 1.0880433524901305 1.1058335998020505 1.0803420778295985 1.0010199804911875 1.0 12.809459446694992 -9.466566500685053 0.3985297787057935 0.992933884809251 1.1444831519658787 0.6298616828745142 0.038334780140436245 0.5878189688765213 0.21989394827716202 0.03473468706034436 0.017197682907517865 3.415336498588363e-10 9.466566500685053 0.15154926715662764 VADPDHDHTGFLT(ph)EYVATR ddPTM_A549_PD325901_60min_R1 4 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLT(1)EYVATR;VADPDHDHTGFLT(1)EYVATR;VADPDHDHTGFLT(1)EYVATR;VADPDHDHT(0.002)GFLT(0.998)EYVATR 189.11 9.523099999999998e-44 93405000.0 2213.1099999999997 1564.4 1911.3500000000001 2025.2200000000003 2311.2200000000003 1842.367 2555.84 3844.9399999999996 5801.0599999999995 9327.009999999998 8265.77 True False 2437.7832979945265 1696.237478262277 2041.0657048812516 2150.3132397916656 2148.8878804761475 1827.3633739868321 2653.1038898093125 3768.249655402923 5557.261621929558 8738.100996842513 7249.132691033156 0.3362862016596761 0.2339917822666489 0.2815599868113817 0.29663041517387373 0.2964337903669805 0.2520802766167043 0.36598914696251594 0.5198207587045653 0.7666105531222562 1.2053995104340058 1.0 12.823592681555883 -8.741119369599199 0.9077961117816068 0.9394352171766472 0.2688944678093881 0.9186768628657519 0.0912506056384437 0.059633190356940396 0.09899626840136215 0.012811873386015405 0.013473741716889804 1.815016721143808e-09 8.741119369599199 -0.6705407493672592 down VADPDHDHTGFLTEY(ph)VATR ddPTM_A549_MK2206_60min_R1 4 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLTEY(0.999)VAT(0.001)R;VADPDHDHTGFLT(0.115)EY(0.818)VAT(0.068)R;VADPDHDHTGFLT(0.001)EY(0.998)VAT(0.001)R;VADPDHDHTGFLT(0.007)EY(0.992)VAT(0.001)R 153.72 6.3042e-23 161382800.0 2034.27 3077.0 2806.5 2008.76 2709.2799999999997 2714.8 2544.12 2736.9299999999994 4091.0799999999995 3396.9300000000003 4163.959999999999 True False 2377.605042873574 3233.6061570703764 3204.503901024224 2500.9062901766624 2310.7485009615148 3002.0783340616063 3006.3536723773123 3124.8982089965925 3164.4569121123086 2629.5611537296545 3129.933812550348 0.7596342879008812 1.0331228552195975 1.023824813219649 0.7990284906819999 0.7382739186675195 0.9591507405121253 0.960516692181315 0.998391146952193 1.0110299775105565 0.8401331501598184 1.0 11.61191643405161 -7.613661046201477 3.305411882283434 1.0020117742664931 0.8822225197901843 0.09888337329518859 0.1021338060244577 0.2520414323038718 5.509175870879699 0.014135363897599172 0.021615736517804483 2.43410301220953e-08 7.613661046201477 -0.11978925447630884 VADPDHDHTGFLTEY(ph)VATR ddPTM_A549_PD325901_60min_R1 2 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLTEY(1)VATR;VADPDHDHTGFLT(0.023)EY(0.976)VAT(0.001)R 141.13 2.9463000000000003e-21 62731000.0 572.98 709.4000000000001 784.0 712.9 1089.95 1149.4 1102.48 1896.17 1985.8799999999999 3102.3 3271.4 True False 631.1485077944177 769.1836276395165 837.2069545749866 756.9342138866286 1013.3956721233709 1140.039667482356 1144.435479700205 1858.3494018334109 1902.4203696837246 2906.42024855817 2869.0385391132186 0.21998606822113212 0.26809804648956054 0.29180749688840224 0.26382852776895316 0.35321786665040683 0.3973594819101757 0.3988916370757204 0.647725492878113 0.6630863767594204 1.013029350751247 1.0 11.486351632278629 -8.874141683542403 0.33160696791959243 1.0471934829432472 0.1830374935541664 0.9760695762625284 0.042626031508748975 0.1271637431377762 0.04109283751976246 0.03796782394852485 0.031401141135001726 1.336159538866956e-09 8.874141683542403 -0.8641559893890808 down VADPDHDHTGFLTEYVAT(ph)R ddPTM_A549_MK2206_60min_R1 1 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLT(0.031)EY(0.202)VAT(0.767)R 118.53 4.2463e-14 54657000.0 1173.1 1452.0 1484.9 868.84 1863.7 1365.0 1386.7 1166.9 1861.7 1421.4 2055.0 True False 1371.090600458636 1525.9005980065606 1695.4811482739608 1081.7058390037091 1589.552198828462 1509.4433939863313 1638.6454402644608 1332.311648481373 1440.0279225240008 1100.3047527948268 1544.6867848852933 0.8876172269192111 0.9878381901997513 1.0976213202988367 0.700275194679053 1.0290449911154644 0.9771841183314202 1.0608269950248488 0.862512492188058 0.932245900343438 0.7123157675467096 1.0 10.59309861812979 VADPDHDHTGFLTEYVAT(ph)R ddPTM_A549_PD325901_60min_R1 1 VADPDHDHTGFLTEYVATR 19 0 P28482-2;P28482 P28482-2 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLT(0.134)EY(0.334)VAT(0.532)R 136.36 6.236300000000001e-17 37078000.0 1700.4 2046.5 2067.3 2443.9 2144.4 2529.2 2584.1 3485.7 4506.5 5245.3 5529.5 True False 1873.02335623168 2218.965737192376 2207.599409684783 2594.854152500397 1993.7847417783914 2508.6030337535876 2682.4393395737793 3416.1749790212502 4317.107476775894 4914.110862831504 4849.406554388502 0.38623764273520755 0.45757469750279206 0.4552308380263564 0.5350869479384374 0.41113994453075975 0.5173010358315723 0.5531479593407751 0.7044521717672363 0.8902341819266729 1.0133427271393545 1.0 12.243592493111354 -8.499745908037864 1.0248571738894652 0.9684325078926843 0.45055011108299275 0.9650390766779716 0.04189785782139821 0.05494132336332542 0.11284131133034382 0.008738470125557072 0.010357832670194201 3.164128350123641e-09 8.499745908037864 -0.5178823968096915 down VADPPRDS(ph)K ddPTM_A549_MK2206_60min_R1 2 VADPPRDSK 9 1 Q15758 Q15758 SLC1A5 Neutral amino acid transporter B(0) 1 VADPPRDS(1)K;VADPPRDS(1)K 103.46 0.00018124 71757000.0 8065.8 8097.2 7901.9 7885.7 10467.5 7528.6 7601.299999999999 8163.0 10760.2 10046.6 9859.5 True False 9427.109850122977 8509.312894062477 9022.508239979803 9817.696854002521 8927.744616213404 8325.271454919784 8982.357817179094 9320.130248139045 8323.03188050854 7777.066082333265 7411.114041643086 1.2720233148689928 1.1481826951047585 1.2174294160476125 1.3247261881057064 1.2046427252432446 1.1233495272289757 1.2120118199109042 1.2575882918234946 1.1230473358986766 1.049378816549562 1.0 12.85547470999328 -9.561960547287713 0.5522473720491072 1.0007510844250773 1.226459518647589 0.628693953295451 0.056683992127020036 0.3262944401259124 0.21984972298205677 0.030471553142055068 0.015712545805588576 2.741823236685994e-10 9.561960547287713 0.22570843422251174 VADPPRDS(ph)K ddPTM_A549_PD325901_60min_R1 2 VADPPRDSK 9 1 Q15758 Q15758 SLC1A5 Neutral amino acid transporter B(0) 1 VADPPRDS(1)K;VADPPRDS(1)K 71.176 0.00089845 119914000.0 19999.6 21694.9 22998.8 20978.4 27488.1 23071.8 24445.3 23623.2 24357.3 23619.8 21526.6 True False 22029.944669072644 23523.20536125817 24559.636871019415 22274.188122596788 25557.430684796953 22883.910910230923 25375.579268481444 23152.0167439581 23333.647385792403 22128.44179701972 18878.964668360528 1.1669042797666167 1.2460008149006696 1.3008995621555026 1.1798416128150477 1.353751709045197 1.2121380230443637 1.344119220213843 1.226339322662054 1.2359601172885042 1.1721215747654334 1.0 14.20449202831817 -10.457816855053677 0.6438292082684474 0.9848476056965944 1.2586999133669774 0.34455171161243525 0.07561954326541892 0.3239066520790293 0.22522181107835998 0.04756290302455488 0.011409257923147483 3.484842422364828e-11 10.457816855053677 0.27385230767038304 VADPRS(ph)PSAGILR ddPTM_A549_MK2206_60min_R1 1 VADPRSPSAGILR 13 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 VADPRS(0.935)PS(0.065)AGILR 65.51100000000001 0.0015071 12059000.0 2248.4 2282.5 2083.5 2409.9 2787.3 1944.8 1935.1 1678.9 2988.9 3313.5 3770.0 True False 2627.8749518977042 2398.669500654251 2378.971629354701 3000.3256081845216 2377.2918623139826 2150.5974451462407 2286.682621659883 1916.889216415613 2311.918922292521 2564.9780486743066 2833.804953293216 0.9273309191035901 0.8464483407253254 0.839497307882836 1.0587622146322346 0.8389045475946708 0.7589080690422934 0.8069301378708114 0.6764365395677502 0.8158355851576159 0.9051357065677718 1.0 11.468524747716772 -10.676274644732116 1.0644748473532781 0.995380978331291 0.8396890351283035 0.14913746059854716 0.09447505861993988 0.5172119774168327 1.08683961080621 0.05602778227702711 0.01668698395990595 2.1072950900873362e-11 10.676274644732116 -0.15569194320298751 VADPRS(ph)PSAGILR ddPTM_A549_PD325901_60min_R1 3 VADPRSPSAGILR 13 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 VADPRS(0.873)PS(0.127)AGILR;VADPRS(0.822)PS(0.178)AGILR;VADPRS(0.981)PS(0.019)AGILR 58.658 0.0030686 39311000.0 6716.400000000001 6879.5 9999.9 6726.400000000001 7795.3 7391.200000000001 7233.3 7735.3 7961.400000000001 6603.5 7963.5 True False 7398.243983647649 7459.25960860735 10678.553348283687 7141.874451237225 7247.785020325078 7331.008517744551 7508.567189713636 7581.013373274538 7626.8100445142745 6186.553883039643 6984.039984785756 1.0593072204288931 1.0680436573755057 1.528993730211478 1.02259930739161 1.0377639641402214 1.0496802042535038 1.0751036944333832 1.0854767999308776 1.0920341322685363 0.8858130675821757 1.0 12.769846103321163 -7.828482915452644 0.15210373811412603 0.9579617703297243 1.243152589641637 0.18411992049617465 0.13682806150718774 9.861521902496492 0.8463176238417845 0.5468026823926315 0.8910669354247635 1.4842842686169491e-08 7.828482915452644 0.2851908193119128 VAEAVAHFEAQRDS(ph)PPTK ddPTM_A549_MK2206_60min_R1 2 VAEAVAHFEAQRDSPPTK 18 1 Q6PJ61 Q6PJ61 FBXO46 F-box only protein 46 1 VAEAVAHFEAQRDS(0.995)PPT(0.005)K;VAEAVAHFEAQRDS(0.958)PPT(0.042)K 99.11 2.8368e-07 20259300.0 3229.1000000000004 3562.1 3091.0 2947.7 4141.0 3080.1 3219.1000000000004 3311.1 4958.1 4559.0 4229.8 True False 3774.0931360847158 3743.395675040749 3529.3502790186626 3669.8866323272814 3531.864385549532 3406.0341375950907 3803.968801294677 3780.4585648184707 3835.0982664587477 3529.118733636987 3179.423923458791 1.1870367799142065 1.1773817412081469 1.1100596724387726 1.1542615016669222 1.1108504152246967 1.071273985348194 1.1964333454333653 1.1890388497504396 1.2062242591062442 1.1099868462327525 1.0 11.634549673423933 -10.873959580867307 1.111722972946033 0.9996317661973112 1.1571271210389928 0.2961949174602222 0.05102396251832117 0.25957839885936773 0.5674773190206421 0.031623739374222956 0.007566194695464026 1.336719917264933e-11 10.873959580867307 0.15749535484168165 VAEAVAHFEAQRDSPPT(ph)K ddPTM_A549_PD325901_60min_R1 1 VAEAVAHFEAQRDSPPTK 18 1 Q6PJ61 Q6PJ61 FBXO46 F-box only protein 46 1 VAEAVAHFEAQRDS(0.383)PPT(0.617)K 57.293 0.0041176 18780000.0 1362.5 1272.6 1333.8 1572.3 1535.1 1754.9 1774.8 1608.7 1736.1 1404.4 1686.5 True False 1500.8199969805123 1379.8464681900875 1424.319688790967 1669.417400047616 1427.2798718075019 1740.6086762352406 1842.340985207826 1576.6132164992641 1663.137754450378 1315.725944323597 1479.0711916043408 1.0147043668348248 0.9329141666895528 0.9629825101562656 1.128693067327481 0.9649838898284124 1.1768254875867141 1.245606699437806 1.065948160878666 1.1244473990777828 0.8895622819185843 1.0 10.5304757794944 -6.245536800817647 23.60354472876884 1.079278380313028 0.9664716952615193 0.1893907304873078 0.09565347566899948 425.4578360617365 631486.2255311098 0.011824007053520253 0.031142294810315524 5.681502461646515e-07 6.245536800817647 -0.11280668505150859 VAEDEAEAAAAAK ddPTM_A549_MK2206_60min_R1 2 VAEDEAEAAAAAK 13 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2;F5H867 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ; 208.46 7.667600000000001e-37 6643300.0 4837.2 4993.0 4562.4 4756.799999999999 6458.5 5124.799999999999 4238.7 4789.2 6872.5 6189.200000000001 7335.8 False True 5653.601101814437 5247.1223731727 5209.416924294647 5922.216213540867 5508.463205523219 5667.102934433082 5008.816923378506 5468.083766309876 5315.889723127355 4791.0554214139165 5514.118402219723 1.0252955575887825 0.9515795618498972 0.9447415786715031 1.07400962067787 0.9989744150770814 1.0277441507516005 0.9083622363571651 0.9916514966578673 0.9640507031890047 0.8688706103019594 1.0 12.42891453069377 VAEDEAEAAAAAK ddPTM_A549_PD325901_60min_R1 2 VAEDEAEAAAAAK 13 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2;F5H0E2;H0YFS2;F5H867 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 ; 208.46 7.667600000000001e-37 8597600.0 11833.7 12306.7 10745.4 11128.3 12969.5 12492.4 10459.8 11598.4 12149.9 13561.7 15106.9 False True 13035.0485124905 13343.828799367411 11474.64746133937 11815.669816796975 12058.567062346034 12390.666036242012 10857.853412822178 11367.060813231214 11639.281955415383 12705.411947545803 13248.84707052928 0.9838628556205201 1.0071690561701334 0.8660864904134611 0.8918262663835661 0.9101597292317681 0.9352259838370234 0.819531945309745 0.8579660367969746 0.878512816508071 0.9589824593724616 1.0 13.693579199753586 -4.145015627836965 22.569846811868203 0.9252453132050186 0.9218589816938523 0.0 0.06007836188715539 0.0 0.0 0.009078545654435425 0.0 7.161176406681285e-05 4.145015627836965 -0.003386331511166296 VAEIEHAEKEK ddPTM_A549_MK2206_60min_R1 2 VAEIEHAEKEK 11 1 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 ; 90.65299999999999 0.0010639000000000002 6692100.0 2097.99 2432.5 2070.6 1634.0900000000001 2109.05 1698.73 1982.6599999999999 1900.92 2242.5 2633.8 2907.8 False True 2452.0794210691442 2556.303859952451 2364.2422153788566 2034.4421233570877 1798.811538841642 1878.488481074287 2342.883658033271 2170.3812313233475 1734.5773305366458 2038.8227507464578 2185.7130088026547 1.1218670571999783 1.16955146886041 1.0816800768706598 0.9307910577297456 0.8229861521604982 0.8594396764391923 1.0719081821802008 0.9929854571860255 0.7935979351135658 0.9327952675101365 1.0 11.093888267575634 -6.181382545070836 3.131106818591374 0.9113068466424348 1.142535329194676 0.5671560302788696 0.07784323740811905 0.16163604141197147 3.067871207367006 0.013584534967482933 0.039962738819843725 6.585935224574664e-07 6.181382545070836 0.23122848255224127 VAEIEHAEKEK ddPTM_A549_PD325901_60min_R1 1 VAEIEHAEKEK 11 1 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 79.82 0.0033134999999999996 3880500.0 1343.3 1325.7 1260.0 1369.9 1673.7 1436.1 1013.8 1276.9 1449.5 1503.3 1658.1 False True 1479.6708271148068 1437.4213915445541 1345.5111769955154 1454.5156117313686 1556.145085951545 1424.4048777374364 1052.380713772647 1251.431227791329 1388.5825557720311 1408.3813814452167 1454.164211561909 1.0175403956101363 0.988486293443179 0.9252814546648139 1.0002416509543184 1.070130232596014 0.9795350940506862 0.7237014261561912 0.8605845322291176 0.9549007909365085 0.9685160522087686 1.0 10.50597447952423 -7.532963189806039 24.999843540998448 0.9457585630172823 0.9984357725031268 0.17763355902745148 0.0803777979662277 482.28174177241584 1195598.3192114574 0.014018876457556406 0.020806109752709485 2.9311416741980206e-08 7.532963189806039 0.05267720948584442 VAEVHT(ph)AKESPRGER ddPTM_A549_PD325901_60min_R1 1 VAEVHTAKESPRGER 15 2 Q8WVS4;H7BYQ2 Q8WVS4 WDR60 WD repeat-containing protein 60 1 VAEVHT(0.5)AKES(0.5)PRGER 44.391000000000005 0.034677 6621100.0 518.8 422.87 538.99 369.39 519.8 492.24 667.51 449.93 504.34 536.36 682.96 True False 571.4681940796261 458.5067389623938 575.569102610169 392.2063813544422 483.2910412126503 488.2313606416517 692.9124583254876 440.95579318674316 483.1443436895938 502.4941380642295 598.9602496401432 0.95410036713282 0.7655044541567922 0.9609470794697518 0.6548120373431806 0.8068833307435891 0.8151314898358987 1.1568588378641005 0.7362020993073756 0.8066384104452143 0.8389440507381404 1.0 9.226316450635276 VAEVHTAKES(ph)PR ddPTM_A549_PD325901_60min_R1 1 VAEVHTAKESPR 12 1 Q8WVS4;H7BYQ2 Q8WVS4 WDR60 WD repeat-containing protein 60 1 VAEVHT(0.056)AKES(0.944)PR 75.462 0.00052249 3400300.0 983.13 1108.7 959.62 871.09 1113.0 957.84 812.77 927.14 1247.5 1265.3 1022.8 True False 1082.9366338579462 1202.1340399829883 1024.7455838638375 924.8952509110726 1034.8267196415547 950.0396686108404 843.7004071148095 908.6474653727404 1195.0719132981092 1185.4087420625515 897.0020840633973 1.207284412263871 1.3401686142548863 1.1424115975536704 1.031095988898175 1.153650295831884 1.0591276045950575 0.9405779786964011 1.012982557695507 1.3322955816161126 1.3215228404962887 1.0 9.80896752683056 -5.867545707116678 6.627041183916714 1.1193240633918295 1.2724296740386696 0.20767773579976656 0.12258301584224121 0.28761136785639146 15.77265513688779 0.019557491348129997 0.06207509707696104 1.3566077472477689e-06 5.867545707116678 0.15310561064684003 VAEVHTAKES(ph)PRGER ddPTM_A549_MK2206_60min_R1 2 VAEVHTAKESPRGER 15 2 Q8WVS4;H7BYQ2 Q8WVS4 WDR60 WD repeat-containing protein 60 1 VAEVHT(0.036)AKES(0.964)PRGER;VAEVHT(0.031)AKES(0.969)PRGER 60.034 0.0011804 17861000.0 1881.92 2526.3 2380.7 2025.23 2143.8 2103.2 1938.4 2124.1000000000004 2491.9 3363.6000000000004 3624.5 True False 2199.5420874734596 2654.8778793002566 2718.3190583176097 2521.41144091603 1828.4498598746875 2325.759228008829 2290.58218894399 2425.1976797834313 1927.4886287466072 2603.7604238783438 2724.4366188889285 0.8073383217006055 0.9744685785287092 0.9977545594091253 0.9254799408562878 0.6711295271828934 0.853666116467526 0.8407544418772819 0.8901648373719437 0.707481545132318 0.9557060002152671 1.0 11.411742213206095 -6.557414299394058 24.997904571814452 0.8459816233697748 0.9363660909590941 0.12956055515349563 0.09973768621104687 314.53455493445 227668.9131038371 0.01727013919273996 0.03595076999379944 2.770675730803209e-07 6.557414299394058 0.09038446758931928 VAEVHTAKES(ph)PRGER ddPTM_A549_PD325901_60min_R1 2 VAEVHTAKESPRGER 15 2 Q8WVS4;H7BYQ2 Q8WVS4 WDR60 WD repeat-containing protein 60 1 VAEVHT(0.235)AKES(0.765)PRGER;VAEVHTAKES(1)PRGER 108.75 7.2913e-07 29047000.0 4316.3 4811.8 4415.9 4453.200000000001 4885.5 4649.4 4122.6 4299.0 4591.0 4586.1 5325.5 True False 4754.487598507883 5217.307273013572 4715.589528963886 4728.264050049007 4542.359334060032 4611.536827903657 4279.487798973281 4213.253072499744 4398.05623563256 4296.5328633312765 4670.497261125951 1.017983168105249 1.117077471908376 1.0096547038391934 1.0123684450912471 0.9725643930610018 0.9873759837709272 0.9162809781718176 0.9020994632772837 0.9416676618652569 0.9199304962862733 1.0 12.189360444440496 -6.366790042907506 1.3667371657911078 0.9625635273824974 1.0653285324363941 0.5604516573792397 0.03889007700386131 0.2931390020442657 1.0203657276318323 0.006136867558214049 0.023271954044159937 4.297441338071572e-07 6.366790042907506 0.10276500505389674 VAFAEFQMTS(ph)QNS(ph)NVGK ddPTM_A549_PD325901_60min_R1 1 VAFAEFQMTSQNSNVGK 17 0 Q3B7T1-5;Q3B7T1 Q3B7T1-5 EDRF1 Erythroid differentiation-related factor 1 2 VAFAEFQMT(0.567)S(0.603)QNS(0.83)NVGK 41.136 0.032544 57656000.0 8933.4 11886.0 8731.8 11385.0 14051.0 12983.0 10887.0 13385.0 13719.0 13252.0 17306.0 True False 9840.312191578509 12887.674933920624 9324.39245657892 12088.22559278898 13064.106233318487 12877.270752499939 11301.310742594997 13118.025674670635 13142.43813910762 12415.26645839953 15177.471711772741 0.6483498950583221 0.8491318698307316 0.6143574261677753 0.7964584498887572 0.8607564211887164 0.8484463682123946 0.744610891537942 0.864309018246784 0.8659174853815341 0.8180062328015644 1.0 13.88964386380231 -14.999999148583017 0.03372330237194427 2.256594131350357 6.673387790528594e-10 0.2881095158083882 0.08690214724294126 338.1436661698364 0.8801267838646554 47.85478894505075 17.869788025990882 1.000001960461975e-15 14.999999148583017 -2.2565941306830184 VAFDPEQKPLHGVLKT(ph)PT(ph)SSPASSPLVAK ddPTM_A549_PD325901_60min_R1 1 VAFDPEQKPLHGVLKTPTSSPASSPLVAK 29 2 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 2 VAFDPEQKPLHGVLKT(0.898)PT(0.717)S(0.194)S(0.182)PAS(0.005)S(0.005)PLVAK 72.495 3.2104e-05 8819500.0 1751.8 1576.1 1727.6 1562.3 1841.4 2056.7 2017.3 2315.5 2597.3 1887.3 1933.9 True False 1929.6414463929991 1708.9234783234306 1844.845324902739 1658.799722759264 1712.0664164851362 2039.9509170967112 2094.0694554089177 2269.3155360253904 2488.144513354049 1768.1355559113667 1696.0425600021567 1.1377317361602914 1.0075946905019042 1.087735277645623 0.9780413309658659 1.0094477915005617 1.2027710655410186 1.234679780327125 1.3380062443848724 1.467029526281985 1.0425065960073068 1.0 10.727956657590118 -7.351033280491067 4.5087567744230945 1.2369464588468264 1.0409961143962772 0.3040382060868052 0.12616838480911266 0.2713226133247997 9.693323792371487 0.026203489594241323 0.04259394018804486 4.4562209854954845e-08 7.351033280491067 -0.19595034445054926 VAFDPEQKPLHGVLKT(ph)PTSSPASS(ph)PLVAK ddPTM_A549_MK2206_60min_R1 1 VAFDPEQKPLHGVLKTPTSSPASSPLVAK 29 2 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 2 VAFDPEQKPLHGVLKT(0.336)PT(0.324)S(0.32)S(0.317)PAS(0.334)S(0.369)PLVAK 46.132 0.006159899999999999 5830000.0 1333.4 1147.0 1163.5 856.72 1307.4 1214.1 899.96 966.39 1191.9 1447.5 1294.0 True False 1558.445321499911 1205.3774007668899 1328.501795418381 1066.6164384596227 1115.083191902307 1342.5752561456447 1063.4710827290717 1103.3787419452526 921.9365530731892 1120.5087446675898 972.6640874168224 1.6022441268894712 1.2392535268451226 1.3658382298729501 1.09659280347475 1.1464216745821445 1.380307213471018 1.0933590501458856 1.1343882808252734 0.9478468106308374 1.1519997079807989 1.0 9.925797841553253 -2.0000000022476576 0.2076692460492149 0.9419882973464466 3.750691943171742 0.5244135400671652 0.12446723930585914 19.993564397331543 0.22627229985442762 0.08207636091690676 18.731938094534772 0.00999999994824577 2.0000000022476576 2.808703645825295 VAFISLS(ph)PVRR ddPTM_A549_MK2206_60min_R1 2 VAFISLSPVRR 11 1 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 VAFIS(0.489)LS(0.511)PVRR;VAFIS(0.008)LS(0.992)PVRR 83.617 0.00024741 5730000.0 780.89 744.76 600.4000000000001 833.55 1202.9 1097.17 751.96 699.6400000000001 1163.4099999999999 970.1600000000001 926.82 True False 912.6851410724953 782.665102872842 685.5457481471384 1037.7697874194812 1025.9550034719948 1213.2718011574977 888.5813984721018 798.8161125576387 899.8994925840074 751.0001821946171 696.6650150692884 1.3100774709947536 1.1234453947640821 0.9840392919385451 1.4896252359051896 1.4726661756797936 1.7415425992603188 1.2754787153819198 1.1466287172152467 1.291724822000005 1.077993247759003 1.0 9.44432130602579 -10.383629973554022 0.6180776857031495 0.9840520329792731 1.3247558719078856 0.2338889247310434 0.19423837759599447 1.0359371372293649 0.6766006205200278 0.18285172225907637 0.04605668802167893 4.133995756051328e-11 10.383629973554022 0.34070383892861245 VAFISLS(ph)PVRR ddPTM_A549_PD325901_60min_R1 2 VAFISLSPVRR 11 1 Q6ZU65-2;Q6ZU65 Q6ZU65-2 UBN2 Ubinuclein-2 1 VAFIS(0.002)LS(0.998)PVRR;VAFISLS(1)PVRR 105.65 7.1744e-05 10012300.0 1788.56 1816.85 1581.5 1778.28 1889.96 1935.95 1814.6 1530.3600000000001 1850.44 2265.6 1768.41 True False 1970.1332945317192 1969.9623257356282 1688.8301003320696 1888.1203168330958 1757.2157296080431 1920.1842650621772 1883.6555959872198 1499.835769255805 1772.6724418784388 2122.549629350285 1550.9067808746117 1.2703105814139846 1.2702003434562947 1.0889307604804448 1.2174299191395097 1.1330247254558308 1.2381042424608633 1.2145511382218337 0.9670702248203429 1.1429909674382657 1.3685862074529738 1.0 10.59889625871399 -14.999999004694818 0.03578935555646555 0.06364647862488858 1.7523922291773255 0.0 0.1297600354184992 429.8147320762238 1.185816558703354 46.797671003576525 16.465764800058132 1.0000022917775019e-15 14.999999004694818 1.688745750552437 VAFS(ph)VAR ddPTM_A549_PD325901_60min_R1 1 VAFSVAR 7 0 P39023;G5E9G0;B5MCW2;H7C422 P39023 RPL3 60S ribosomal protein L3 1 VAFS(1)VAR 54.157 0.043148 1166200.0 776.97 635.86 610.5 849.13 847.62 715.51 1049.3 929.55 869.21 1001.5 924.13 True False 855.8474224249164 689.446153750864 651.9322012347317 901.5788315858508 788.0860953302549 709.6831237865846 1089.2316856989921 911.0093960321318 832.6801264591973 938.2651190829405 810.4678685427338 1.0559917988652376 0.850676727000327 0.8043899413396141 1.1124177361984007 0.9723841325718162 0.8756462178601038 1.3439541874220025 1.1240536872487954 1.027406710097468 1.1576833030654174 1.0 9.662611180190034 -6.266215909241867 24.987022347969408 1.037405836928147 0.8983852132602366 0.2182205159027144 0.13122410779395133 489.4577925219054 2560461.7010226278 0.017564939034556495 0.04208712063335715 5.417315019519071e-07 6.266215909241867 -0.13902062366791035 VAFSEITS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 VAFSEITSPSK 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 VAFSEIT(0.055)S(0.939)PS(0.005)K 68.132 0.0042562 2204700.0 1350.6 1565.9 1670.9 1188.0 1933.9 1723.0 1492.8 1484.1 2282.7 1975.5 2473.0 True False 1578.5482610002853 1645.5976215003254 1907.8587451350004 1479.0600533313473 1649.42587182184 1905.3267163651647 1764.022436883815 1694.4757198656316 1765.672094722853 1529.2331779556635 1858.8858486721797 0.8491905310527044 0.8852601802718504 1.0263452952196084 0.7956701883484961 0.8873196129821748 1.0249831735101744 0.9489675969849755 0.9115544782246915 0.9498550413862636 0.8226611542865904 1.0 10.860222463950683 -2.0000000298104044 0.06163062065619196 1.1049753061662584 0.5469138685436044 0.0 0.08081811226568829 266.03185778491286 1.1888971110212478 2.0984507463870044 13.189587970777982 0.009999999313590096 2.0000000298104044 -0.558061437622654 VAFSEITS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 VAFSEITSPSK 11 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 VAFSEIT(0.047)S(0.94)PS(0.013)K 93.839 0.00028933 2426300.0 2683.1 2418.4 2807.9 3226.2 3607.6 2789.0 2479.2 2648.0 3150.4 3731.9 3464.5 True False 2955.486336806176 2622.2070553755398 2998.460979274369 3425.475046768189 3354.2146215443586 2766.2873086900026 2573.5473126702936 2595.1835626841857 3017.9996438111107 3496.2671971099617 3038.388463274971 0.9727150996421842 0.8630256094867987 0.9868589930210683 1.127398648386122 1.103945286156389 0.9104455674862324 0.8470106254604319 0.8541315878638275 0.9932895942338184 1.1506978911253039 1.0 11.569090617376542 VAFSEITS(ph)PSKR ddPTM_A549_MK2206_60min_R1 2 VAFSEITSPSKR 12 1 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 VAFSEIT(0.027)S(0.972)PS(0.001)KR;VAFSEIT(0.154)S(0.828)PS(0.017)KR 103.76 7.9295e-05 66198000.0 9754.0 9438.7 10209.0 8613.5 11870.1 9823.7 9121.3 8922.2 14360.8 14262.5 14114.1 True False 11400.23673759572 9919.089514052706 11656.789711582513 10723.807886674711 10124.024014226383 10863.2374135557 10778.522141980398 10186.949173091542 11108.101729485243 11040.591344263554 10609.1794406567 1.0745634760316631 0.9349535060214537 1.0987456453899855 1.0108046476788515 0.9542702214488807 1.023946995554189 1.015961903771251 0.9602014208613457 1.0470274154207029 1.040664021757761 1.0 13.37302545590817 VAFSEITS(ph)PSKR ddPTM_A549_PD325901_60min_R1 2 VAFSEITSPSKR 12 1 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 VAFSEIT(0.008)S(0.991)PS(0.001)KR;VAFSEIT(0.022)S(0.976)PS(0.001)KR 117.7 8.8876e-06 146134000.0 6460.0 6518.4 6601.1 6294.1 7191.0 6995.1 6605.5 7445.5 8244.8 7320.1 7232.799999999999 True False 7115.814444399353 7067.728444326786 7049.090341638962 6682.872262061764 6685.928967603247 6938.134224818012 6856.875917168293 7296.993661618243 7898.299728064322 6857.907636743922 6343.211452496818 1.121799974301412 1.114219271619076 1.1112809961371057 1.0535471365109936 1.0540290226288338 1.0937888917587668 1.0809786128868974 1.1503626698028482 1.24515788054888 1.0811412622930154 1.0 12.630997720224615 -8.23347641400296 23.30830308458143 1.1215982531329585 1.0890691145881202 0.054359271685016086 0.05822514096841437 1135.6620339526373 946621.703497178 0.01442968138166758 0.018625686696559805 5.841489306384987e-09 8.23347641400296 -0.0325291385448383 VAFSVAR ddPTM_A549_PD325901_60min_R1 2 VAFSVAR 7 0 P39023;G5E9G0;B5MCW2;H7C422 P39023 RPL3 60S ribosomal protein L3 0 ; 128.48 0.015947 8321700.0 3698.2 4372.2 4154.200000000001 4611.3 5589.7 5106.6 4192.6 5060.1 5473.4 5096.5 4501.4 False True 4073.638541529052 4740.660638237234 4436.128993233943 4896.1295279778515 5197.098755418143 5065.013542687836 4352.151687278751 4959.172335928346 5243.372032261216 4774.70612022587 3947.756336725635 1.031887024949424 1.2008493518546925 1.1237089158631752 1.240230933816655 1.3164689793718989 1.2830106801598808 1.1024367554783108 1.256200209165291 1.3281903909525978 1.20947335979356 1.0 11.946817231233002 -3.94088924623661 15.835948850002449 1.1778634031577384 1.1915859764851358 0.0 0.10701994163452837 0.0 0.0 0.01770011022873602 0.0 0.00011458051073677711 3.94088924623661 0.013722573327397347 VAFTGS(ph)TEVGK ddPTM_A549_MK2206_60min_R1 1 VAFTGSTEVGK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 VAFT(0.087)GS(0.456)T(0.456)EVGK 73.781 0.001467 2411200.0 2833.8 2410.0 2306.0 2140.2 3288.7 2337.5 2098.7 2602.9 3411.2 3179.8 3434.0 True False 3312.076160241822 2532.658706057722 2633.025475062127 2664.5490960772277 2804.9365865145455 2584.852698493077 2480.0066239871812 2971.8690460469356 2638.568646567046 2461.4809715329884 2581.2430264214595 1.2831322453328087 0.9811779364180626 1.0200610512495822 1.0322736250725142 1.086661177503773 1.0013984239510456 0.9607799802660857 1.1513325229848759 1.0222085326948314 0.9536029526617241 1.0 11.33385026356288 -5.256034065349176 24.707237692655013 1.0211455384558856 1.28313237681416 0.6612876944493691 0.05394238397617822 200.7790063310209 917709.8968171034 0.0065182363121227644 0.07741795094686922 5.545822107298319e-06 5.256034065349176 0.2619868383582744 VAFTGSTEVGK ddPTM_A549_MK2206_60min_R1 2 VAFTGSTEVGK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 212.03 1.7149e-30 57375000.0 11642.8 11178.5 12884.8 11163.5 14802.5 11291.3 11361.7 12133.9 15519.599999999999 15319.9 17351.8 False True 13607.820000869327 11747.437902766067 14712.058387285568 13898.558001148556 12625.07185875318 12486.137871441657 13425.973821773081 13853.917483510282 12004.43537970859 11859.123949867364 13042.869174682553 1.0433149193341138 0.900678964530976 1.1279771490649517 1.0656058736008007 0.9679673766305685 0.9573152735196053 1.0293727278836906 1.0621832740914132 0.9203830245426625 0.9092419613383111 1.0 13.670973648563642 -8.763405886323 24.999979131660936 0.9624030972828727 1.0170721329692944 0.21058507951086636 0.06257018565480589 78.55279961001389 998633.453570289 0.010855735594749644 0.011839393865260657 1.7242256984426696e-09 8.763405886323 0.054669035686421785 VAFTGSTEVGK ddPTM_A549_PD325901_60min_R1 2 VAFTGSTEVGK 11 0 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 180.67 2.624e-16 106845000.0 15528.7 14785.9 16215.900000000001 14867.8 19120.8 15831.8 15735.8 16055.2 17652.7 15796.0 17972.4 False True 17105.16219237527 16031.959684120555 17316.408488128225 15786.150238776283 17777.82097117899 15702.871069816569 16334.634479960154 15734.966440939264 16910.818407917843 14798.637864237766 15761.908736430409 1.0852214968635243 1.0171331373760577 1.0986238264471682 1.0015379801235522 1.1278977228239633 0.9962544088028256 1.0363360652004034 0.9982906705056049 1.0728915317744459 0.9388861534284715 1.0 13.944154632480823 VAGAAT(ph)PK ddPTM_A549_MK2206_60min_R1 2 VAGAATPK 8 0 P16402 P16402 HIST1H1D Histone H1.3 1 VAGAAT(1)PK;VAGAAT(1)PK 109.66 0.0017535999999999997 1538770000.0 19038.7 17640.9 18269.6 16135.2 23685.0 19385.4 18804.1 19882.7 26689.0 24638.0 23824.7 True False 22251.967108474826 18538.746459623915 20860.503997916338 20088.324724336664 20200.967875329774 21436.750161012926 22220.561565787073 22701.13361321502 20643.984113575243 19072.25868816586 17908.36946173074 1.2425456798859398 1.035200133615752 1.164846640141871 1.1217282939836803 1.1280182664590541 1.197024118070724 1.2407920002583854 1.2676270534693943 1.1527562103121878 1.0649913566348008 1.0 14.128346366981521 -10.302810928770327 0.9074604479840618 1.0085987832090773 1.168771298399887 0.3935877410354426 0.06522181684939148 0.3546371081910531 0.565624762388268 0.03244133866430356 0.012495725473732747 4.979538232858575e-11 10.302810928770327 0.16017251519080977 VAGAAT(ph)PK ddPTM_A549_PD325901_60min_R1 2 VAGAATPK 8 0 P16402 P16402 HIST1H1D Histone H1.3 1 VAGAAT(1)PK;VAGAAT(1)PK 99.855 0.0025425 2040000000.0 21982.5 21809.6 21790.0 21407.9 24111.8 21058.6 23615.0 24187.7 22199.7 24143.4 24944.5 True False 24214.147217338814 23647.571532797843 23268.800433914497 22730.217362131512 22418.270349194274 20887.105743556578 24513.68174762384 23705.257348616422 21266.7238105363 22618.981603661574 21876.484636213747 1.1068573228285208 1.0809584778375354 1.0636444026932896 1.0390251331561982 1.0247656660560385 0.9547743200468608 1.1205494006584837 1.0835953647404288 0.9721271111050417 1.0339404150070217 1.0 14.417093307562885 -2.0000000221188494 0.1898160786934799 0.9813978598087078 1.5390876654577064 0.15011136790192237 0.04707984545635174 41.780145906765505 0.4518906233472232 0.04429923362536667 6.905222746649426 0.009999999490694684 2.0000000221188494 0.5576898056489986 VAGAAT(ph)PKK ddPTM_A549_MK2206_60min_R1 2 VAGAATPKK 9 1 P16402 P16402 HIST1H1D Histone H1.3 1 VAGAAT(1)PKK;VAGAAT(1)PKK 102.52 0.00036821 456650000.0 7598.1 7805.6 8141.2 7459.3 9900.1 8796.8 6659.0 7794.1 12113.0 13736.0 12076.0 True False 8880.473524290139 8202.87169958678 9295.744578306932 9286.828834860702 8443.80840458317 9727.67153715675 7868.854104507861 8898.937543430182 9369.424840486232 10633.02805993369 9077.195919355136 0.9783278452054197 0.9036790405830009 1.0240766709117504 1.0230944575139742 0.9302221170062656 1.07166041402881 0.8668815980636982 0.9803619556624468 1.0321937439411197 1.1714000837264162 1.0 13.14803098107437 -8.645661793849555 6.67632058381412 1.0151056541856363 0.9713878582605108 0.16778653150412093 0.07243712688083245 0.3405231371522491 18.801221158028326 0.008806323080924761 0.009980678962316214 2.2611959875974706e-09 8.645661793849555 -0.04371779592512548 VAGGAAPSKPAS(ph)AK ddPTM_A549_MK2206_60min_R1 2 VAGGAAPSKPASAK 14 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPS(0.015)KPAS(0.985)AK;VAGGAAPSKPAS(1)AK 164.53 4.2456999999999996e-20 133587000.0 16304.5 16596.5 15836.0 14070.4 23096.7 17667.5 16488.4 16555.3 24802.0 23126.2 23485.4 True False 19056.3009932468 17441.190960617 18081.78292414739 17517.64863164426 19699.20602601349 19537.063123262647 19484.128850693396 18902.064473479888 19184.386600655467 17901.975358156556 17653.32701593434 1.0794736298741932 0.9879832251945562 1.0242705472926612 0.992314288169725 1.1158919793550806 1.106707143963741 1.1037086002602527 1.0707366637698608 1.0867292371199577 1.014085069743385 1.0 14.107652484692354 -4.904542320028311 19.6350795715032 1.049197719468794 3.3464321138353843 0.03110324418145738 0.046570622836004404 1405.61136401502 296080.1660560455 0.006983211956363644 3464.783178556822 1.2458268311790844e-05 4.904542320028311 2.2972343943665905 VAGGAAPSKPAS(ph)AK ddPTM_A549_PD325901_60min_R1 4 VAGGAAPSKPASAK 14 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPS(0.021)KPAS(0.979)AK;VAGGAAPSKPAS(1)AK;VAGGAAPS(0.002)KPAS(0.998)AK;VAGGAAPS(0.001)KPAS(0.999)AK 154.49 1.8855e-19 303431600.0 38038.76 37373.49 38434.86000000001 35975.06 43962.56 38936.32 39211.74 41756.71000000001 39528.76 38691.87 43195.36 True False 41900.42691254491 40523.085164574564 41043.28072718876 38197.157750910774 40874.78144819857 38619.23551921577 40703.964223187446 40923.83966154469 37867.50368216575 36248.858725004146 37882.60455794754 1.1060598235385706 1.0697016648522142 1.0834334440866245 1.008303367644167 1.0789855112964584 1.0194450980829852 1.0744763908966233 1.0802805176435293 0.9996013770447412 0.9568734554551466 1.0 15.209247903958133 -6.107071394693735 0.1630331456947674 0.9743554189233173 1.1634308704424705 0.5358539941062725 0.031089784918821743 8.353956672884046 0.30756447795652636 0.0681619900538096 0.3497779271143381 7.814993215119429e-07 6.107071394693735 0.18907545151915317 VAGGAAPSKPAS(ph)AKK ddPTM_A549_MK2206_60min_R1 2 VAGGAAPSKPASAKK 15 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPS(0.069)KPAS(0.931)AKK;VAGGAAPS(0.097)KPAS(0.903)AKK 68.82 0.00050817 211063000.0 5580.700000000001 5579.7 5686.6 5011.0 6212.200000000001 5665.1 5259.9 4982.4 7182.5 6962.0 7950.799999999999 True False 6522.585724984669 5863.682897174384 6493.0453887633585 6238.695224952335 5298.39360925158 6264.577121810964 6215.5557447515985 5688.670457960059 5555.675218095631 5389.27936468101 5976.396929083206 1.091390983962849 0.9811401362315284 1.086448150250189 1.0438890353136847 0.8865531644104446 1.0482197210371644 1.0400172241747472 0.9518561978835491 0.9296027830848721 0.9017606140674693 1.0 12.54506025417528 -6.375781706772427 0.6384090314287237 0.9693208269159683 1.0687443326722075 0.2789836348856135 0.05820738761371825 1.3758522932829802 0.784709229066943 0.010346153214440986 0.07664616500625997 4.209381550396236e-07 6.375781706772427 0.09942350575623915 VAGGAAPSKPAS(ph)AKK ddPTM_A549_PD325901_60min_R1 4 VAGGAAPSKPASAKK 15 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPS(0.097)KPAS(0.903)AKK;VAGGAAPS(0.001)KPAS(0.999)AKK;VAGGAAPS(0.009)KPAS(0.991)AKK;VAGGAAPS(0.001)KPAS(0.999)AKK 135.09 4.759e-10 393950000.0 13607.900000000001 12462.5 13485.0 11827.900000000001 15348.8 13235.300000000001 14302.5 13852.9 13017.9 13635.199999999999 13990.000000000002 True False 14989.363990393482 13512.758612147558 14400.17319189247 12558.482519890098 14270.753238485437 13127.516104949733 14846.789464128307 13576.593042110182 12470.802933966695 12774.271145002207 12269.318689916832 1.221694893516136 1.101345474321456 1.1736734170681227 1.023568042959949 1.1631251578959656 1.0699466235022637 1.210074482483668 1.1065482432425278 1.0164217956303838 1.0411557045543494 1.0 13.58276751852839 -8.724054084086129 3.881036457239013 1.0070864348851285 1.1331651703135008 0.45473592999381085 0.056107235048327375 0.11786594459777028 3.7296918931832503 0.008744131084051828 0.009691248628250418 1.887756246111584e-09 8.724054084086129 0.12607873542837233 VAGLEQVLIS(ph)ANYNSMPLKDLRLCCYPK ddPTM_A549_PD325901_60min_R1 1 VAGLEQVLISANYNSMPLKDLRLCCYPK 28 2 A0A3B3IT53 A0A3B3IT53 1 VAGLEQVLIS(0.787)ANY(0.075)NS(0.138)MPLKDLRLCCYPK 40.986000000000004 0.031867 18684000.0 3222.5 2617.9 3188.7 2304.2 3456.4 2968.6 2749.9 2745.5 4056.0 3596.7 3569.1 True False 3549.6458277208835 2838.5196205208504 3405.1043572107924 2446.525200782114 3213.6343879326746 2944.424705836191 2854.548949303021 2690.7388486969144 3885.5404251199448 3369.6037481833396 3130.123326389002 1.1340274671592108 0.9068395473719069 1.0878499030704378 0.7816066479414069 1.0266797991119452 0.9406737047747451 0.9119605369019465 0.8596271035112939 1.2413378068404777 1.0765083023328057 1.0 11.61200378490775 -8.75406841167689 24.999897017574607 1.113965077290852 0.9534468149459637 0.2740061796957768 0.10830900844732909 164.2300990172719 557013.6619360865 0.020295999480732442 0.022789950287182108 1.7616985152719002e-09 8.75406841167689 -0.1605182623448883 VAGPADAPMDS(ph)GAEEEK ddPTM_A549_MK2206_60min_R1 2 VAGPADAPMDSGAEEEK 17 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 VAGPADAPMDS(1)GAEEEK;VAGPADAPMDS(1)GAEEEK 138.39 3.5621999999999997e-13 22566000.0 3543.4 3570.7 3608.5 2973.1000000000004 4010.6 3858.9 3684.8 4096.5 5294.299999999999 5222.4 4703.6 True False 4141.4392921874805 3752.4333783071797 4120.239560607845 3701.5096334675313 3420.646052809693 4267.246236669492 4354.280463176236 4677.191420005094 4095.149503259827 4042.656212885679 3535.5663072440243 1.1713651880045588 1.0613387084888823 1.1653690533722656 1.0469354303675498 0.9674959414001455 1.2069484393281857 1.2315652104317056 1.322897384337551 1.1582725785312729 1.1434253699619996 1.0 11.787725601031172 -10.584656624983896 1.0685865505427077 1.0065654819187333 1.1454375143824291 0.01424242443043544 0.10023755543361038 0.566250787849551 1.2254346979655908 0.052531243858264236 0.01744503298591842 2.6022161927568785e-11 10.584656624983896 0.13887203246369584 VAGPADAPMDS(ph)GAEEEK ddPTM_A549_PD325901_60min_R1 2 VAGPADAPMDSGAEEEK 17 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 VAGPADAPMDS(1)GAEEEK;VAGPADAPMDS(1)GAEEEK 154.47 1.6924000000000002e-22 33669000.0 7686.200000000001 9451.0 9083.4 8825.2 10958.599999999999 10040.9 9593.0 9896.5 9181.6 10546.8 10765.0 True False 8466.497365718626 10247.468938287388 9699.854146921472 9370.312560516593 10188.905741117644 9959.130239449783 9958.066864491022 9699.106543845939 8795.729281874075 9880.873248071848 9440.973244957453 0.8967822645023057 1.0854250586676215 1.0274209973110866 0.9925155296379428 1.079221969679839 1.0548838537138197 1.0547712196737509 1.0273418102340623 0.9316549315052862 1.0465947727740201 1.0 13.204719875530872 -8.68058609211312 8.60038625564636 0.9677643895931536 1.031836848742514 0.01636040617477219 0.05604248558303643 0.28378581280110876 27.19562708546757 0.00852583645563522 0.009663000566260092 2.0864784710737483e-09 8.68058609211312 0.06407245914936044 VAGPADAPMDS(ph)GAEEEKAGAATVK ddPTM_A549_MK2206_60min_R1 2 VAGPADAPMDSGAEEEKAGAATVK 24 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 VAGPADAPMDS(1)GAEEEKAGAATVK;VAGPADAPMDS(1)GAEEEKAGAATVK 91.27600000000001 5.6889e-08 8679900.0 3110.5 3739.6 3443.3 3422.8 4771.200000000001 3229.9 2441.8 2978.5 5272.1 5456.4 6810.4 True False 3635.4763555763266 3929.9296668769525 3931.611716514062 4261.3861536553295 4069.36280037042 3571.6858741659025 2885.4434528288466 3400.7114962736923 4077.9777678137125 4223.795450365619 5119.189722522045 0.710166364724075 0.7676858799718043 0.7680144572913182 0.8324337218656344 0.7949232243663725 0.6977053142711536 0.5636523764951009 0.6643065954973596 0.7966061015227692 0.825090625530617 1.0 12.32169975976841 -9.972008192134611 0.8656948940670975 0.9798583600328866 0.7314011459674128 0.35985956181817214 0.08477853303641335 0.26797594077414966 0.40824145991362937 0.033345175867007346 0.016424980771404918 1.0665760021245464e-10 9.972008192134611 -0.24845721406547383 VAGPADAPMDS(ph)GAEEEKAGAATVK ddPTM_A549_PD325901_60min_R1 2 VAGPADAPMDSGAEEEKAGAATVK 24 1 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 VAGPADAPMDS(1)GAEEEKAGAATVK;VAGPADAPMDS(1)GAEEEKAGAATVK 127.73 3.981e-28 12639000.0 2692.2 2363.6 2869.8 2705.3 3074.6 3507.0 2969.9 3251.5 3136.2 3334.0 3094.8 True False 2965.5101621071112 2562.78886705492 3064.561885509307 2872.400236817921 2858.6507027941816 3478.440154742142 3082.92116969164 3186.646281747595 3004.39642042928 3123.490671016002 2714.1592195535827 1.092607294643116 0.9442293762988747 1.1291017356061217 1.0583020392187474 1.0532361853349061 1.281590309692394 1.1358659976472236 1.1740822936215678 1.1069344785614437 1.1508133526262858 1.0 11.406289640099283 -4.888150277138435 20.1978170490228 1.0776221244986575 3.8154206172171263 0.0 0.08941883733150614 8933.740444608247 1512938.2857251125 0.012541100829341631 70348.20778535312 1.2937480936413888e-05 4.888150277138435 2.737798492718469 VAGS(ph)PVTPLPEQEASPAR ddPTM_A549_MK2206_60min_R1 1 VAGSPVTPLPEQEASPAR 18 0 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 VAGS(0.983)PVT(0.017)PLPEQEASPAR 76.34100000000001 0.00045086 2159800.0 1674.3 1743.3 1523.6 1700.4 2564.7 1640.6 1412.3 1811.9 2396.9 2402.3 2405.1 True False 1956.8809072951103 1832.0265237636613 1739.6693902014995 2116.9980763338563 2187.4360274375454 1814.2072030578577 1668.8966288926943 2068.7423737110294 1854.0059770627804 1859.6187615301913 1807.8472926168463 1.0824370594169703 1.0133745982006124 0.9622877979275231 1.171004921145478 1.209967255736101 1.0035179467131903 0.9231402650591014 1.1443125656462605 1.0255324023408634 1.0286370807560887 1.0 10.820057104290834 VAHEPVAPPEDKES(ph)ESEAK ddPTM_A549_MK2206_60min_R1 3 VAHEPVAPPEDKESESEAK 19 1 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VAHEPVAPPEDKES(0.853)ES(0.147)EAK;VAHEPVAPPEDKES(0.975)ES(0.025)EAK;VAHEPVAPPEDKES(0.944)ES(0.056)EAK 165.62 8.579000000000001e-28 219404000.0 21552.4 20224.1 18525.6 16913.3 28989.2 28300.0 25731.8 29660.6 30830.1 25114.300000000003 27580.5 True False 25189.918214410296 21253.420305884618 21152.80864735949 21057.05925926689 24724.927081761027 31294.687215980375 30406.934982185798 33865.08088177788 23847.1315755531 19440.962187361147 20731.500666924014 1.215055225336362 1.0251751982331554 1.0203221169178385 1.015703570984723 1.1926260177203818 1.5095234888571938 1.4667020719198787 1.6335084191858713 1.1502848712539129 0.9377498763694492 1.0 14.339536930457442 -4.151950098289539 16.54605373747063 1.1588902484390564 1.0921912534341323 0.0 0.22943672068241588 0.0 0.0 0.03255233481686854 0.0 7.047740449208769e-05 4.151950098289539 -0.06669899500492416 VAHEPVAPPEDKES(ph)ESEAK ddPTM_A549_PD325901_60min_R1 2 VAHEPVAPPEDKESESEAK 19 1 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VAHEPVAPPEDKES(0.853)ES(0.147)EAK;VAHEPVAPPEDKES(0.979)ES(0.021)EAK 135.68 3.4295e-17 263480000.0 21490.5 21003.9 22911.8 18295.3 23730.7 20544.2 20723.6 19660.8 20961.6 23796.4 24638.5 True False 23672.19973953006 22773.972366193473 24466.732527845907 19425.359129359018 22063.93749847065 20376.894846607796 21512.247938389053 19268.64992040078 20080.65684792755 22293.891242880978 21608.12069631993 1.0955233021982178 1.0539543297752914 1.1322934035634495 0.8989842014658564 1.021094699004914 0.943020225265503 0.9955631144754201 0.8917318720680053 0.9293106573283569 1.0317367047416504 1.0 14.39928598298249 -6.2560210387626 24.995664528002873 0.9612532869213771 1.0899267464497697 0.6009620174058934 0.047108287903413995 216.56100132088815 999026.0628576126 0.006026075135409152 0.015439867941844702 5.5459884557515e-07 6.2560210387626 0.1286734595283926 VAHEPVAPPEDKES(ph)ESEAKVDGET(ph)ASDSESR ddPTM_A549_MK2206_60min_R1 1 VAHEPVAPPEDKESESEAKVDGETASDSESR 31 2 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 2 VAHEPVAPPEDKES(0.802)ES(0.198)EAKVDGET(0.629)AS(0.368)DS(0.003)ES(0.001)R 86.544 1.6739999999999998e-07 15161000.0 3661.9 3567.4 2931.0 2942.6 4385.7 3596.5 3184.8 2839.6 5089.9 5203.4 5309.8 True False 4279.939195140634 3748.9654224026212 3346.6598731166923 3663.537132098334 3740.5693397016576 3977.0792428365153 3763.4369352810663 3242.1219959102823 3937.045776900095 4027.9483260817515 3991.2301169751513 1.0723358638073939 0.9393007450153898 0.8385033623801772 0.9178967447947683 0.9371971121866902 0.9964545080779856 0.9429265727562901 0.8123114681163515 0.986424150327839 1.009199722398975 1.0 11.96261774543264 -8.964975646486673 24.999972837815363 0.99401078382711 0.9294310560853241 0.1672145305014634 0.06580842500753384 223.7888224467696 159738.82474763505 0.011257300838422914 0.011935503541962784 1.083987698050915e-09 8.964975646486673 -0.06457972774178589 VAHEPVAPPEDKES(ph)ESEAKVDGET(ph)ASDSESR ddPTM_A549_PD325901_60min_R1 1 VAHEPVAPPEDKESESEAKVDGETASDSESR 31 2 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 2 VAHEPVAPPEDKES(0.922)ES(0.078)EAKVDGET(0.515)AS(0.255)DS(0.2)ES(0.03)R 120.47 8.178599999999999e-16 60268000.0 6130.6 6380.3 6465.6 6309.7 7361.5 5661.2 6026.0 6016.4 6424.0 6323.9 6116.0 True False 6752.973998890816 6917.9902726648015 6904.394496811269 6699.435838631593 6844.45363579632 5615.097064164876 6255.322727553723 5896.398182225508 6154.021620061761 5924.607874756475 5363.7707725183245 1.2589975010658876 1.2897624760755317 1.287227733926745 1.24901606029785 1.2760525992021103 1.0468562700207549 1.1662173856502838 1.0993009269590974 1.147331211764743 1.1045602293654384 1.0 12.38903186783708 -2.00000001314694 0.0575530407172956 0.6969304249768273 2.197678972003554 0.642946416576459 0.05895874604176205 102.22492584470598 0.4285802686874992 2.3166024789627535 12.949755271358478 0.009999999697280524 2.00000001314694 1.5007485470267266 VAHEPVAPPEDKES(ph)ESEAKVDGETASDSESR ddPTM_A549_MK2206_60min_R1 2 VAHEPVAPPEDKESESEAKVDGETASDSESR 31 2 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VAHEPVAPPEDKES(0.244)ES(0.244)EAKVDGET(0.244)AS(0.244)DS(0.019)ES(0.006)R;VAHEPVAPPEDKES(0.899)ES(0.101)EAKVDGETASDSESR 149.44 4.998600000000001e-37 231863000.0 6249.11 6322.88 6134.7 5544.55 7787.299999999999 5353.75 4976.05 5645.2 9238.3 7474.24 8166.9400000000005 True False 7303.806991929134 6644.68758479595 7004.692706792555 6902.9649989043055 6641.798485773935 5920.280271468367 5880.1338739655075 6445.424387699935 7145.839800533641 5785.803992914879 6138.863401922675 1.1897653545510725 1.0823970415622626 1.1410406533233344 1.1244695551854627 1.0819264171432357 0.9643935503784221 0.957853838566251 1.0499377434723904 1.1640330355445903 0.942487821296493 1.0 12.583755852928585 -6.826290410694096 4.114328592441401 1.0587768847957006 1.1316990563644607 0.301912831197521 0.0695947715429126 0.3243537759165352 10.91021929925527 0.01148487416261453 0.022797078096746894 1.4917965186007958e-07 6.826290410694096 0.07292217156876002 VAHEPVAPPEDKES(ph)ESEAKVDGETASDSESR ddPTM_A549_PD325901_60min_R1 4 VAHEPVAPPEDKESESEAKVDGETASDSESR 31 2 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VAHEPVAPPEDKES(0.891)ES(0.109)EAKVDGETASDSESR;VAHEPVAPPEDKES(0.868)ES(0.132)EAKVDGETASDSESR;VAHEPVAPPEDKES(0.984)ES(0.016)EAKVDGETASDSESR;VAHEPVAPPEDKES(0.963)ES(0.037)EAKVDGETASDSESR 208.81 6.985199999999998e-91 342365000.0 18934.0 19264.8 19769.7 21241.5 23139.6 21603.0 22015.5 21222.1 22760.6 23684.1 23579.9 True False 20856.1657415259 20888.312305821488 21111.390726863676 22553.53921205334 21514.354323286352 21427.072330451825 22853.311899843862 20798.808567084612 21804.051134118567 22188.681884046215 20679.721785301645 1.0085322209871153 1.0100867179300304 1.0208740207457165 1.0906113460425533 1.0403599500346243 1.0361392939861198 1.1051073190011251 1.005758625914765 1.0543686883455101 1.0729681044266794 1.0 14.335929156030847 -6.007888711962908 24.103248409431277 1.0364037323787203 1.0108521737586391 0.11619719087790392 0.03247990303341804 457.5973895710848 1398171.4370731935 0.004699874687804161 0.013681558938505116 9.81999548337999e-07 6.007888711962908 -0.025551558620081183 VAHEPVAPPEDKESESEAKVDGET(ph)ASDSESR ddPTM_A549_MK2206_60min_R1 6 VAHEPVAPPEDKESESEAKVDGETASDSESR 31 2 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VAHEPVAPPEDKES(0.001)ES(0.004)EAKVDGET(0.623)AS(0.349)DS(0.019)ES(0.004)R;VAHEPVAPPEDKES(0.001)ES(0.006)EAKVDGET(0.561)AS(0.356)DS(0.064)ES(0.012)R;VAHEPVAPPEDKES(0.006)ES(0.001)EAKVDGET(0.431)AS(0.431)DS(0.105)ES(0.026)R;VAHEPVAPPEDKESES(0.004)EAKVDGET(0.619)AS(0.363)DS(0.012)ES(0.003)R;VAHEPVAPPEDKESESEAKVDGET(0.644)AS(0.356)DSESR;VAHEPVAPPEDKESESEAKVDGET(0.6)AS(0.35)DS(0.043)ES(0.007)R 189.64 1.1314e-67 965428000.0 21264.91 22655.6 21688.329999999998 19724.72 29933.999999999996 21054.41 20123.07 20272.219999999998 36420.799999999996 31249.0 32572.6 True False 24853.90693086597 23808.673270108433 24764.06131897408 24557.27728547632 25530.748253330017 23282.373691413737 23779.171341762867 23145.869266069974 28171.54695206644 24189.829196626935 24483.924461973085 1.0151112404168507 0.9724206308137647 1.0114416648130118 1.0029959585775214 1.0427555555067487 0.9509249110604993 0.971215679851292 0.9453496436822743 1.1506140282298591 0.9879882301629005 1.0 14.57954720179754 -8.745367582961025 24.998831587706828 1.071123301572555 0.9896133456006877 0.16572551485638043 0.04909055260359394 225.26070984547295 350380.9812959505 0.009915450807183994 0.011226424390453864 1.797349011046272e-09 8.745367582961025 -0.08150995597186728 VAHEPVAPPEDKESESEAKVDGET(ph)ASDSESR ddPTM_A549_PD325901_60min_R1 3 VAHEPVAPPEDKESESEAKVDGETASDSESR 31 2 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VAHEPVAPPEDKES(0.014)ES(0.057)EAKVDGET(0.492)AS(0.384)DS(0.047)ES(0.007)R;VAHEPVAPPEDKES(0.003)ES(0.003)EAKVDGET(0.533)AS(0.439)DS(0.018)ES(0.004)R;VAHEPVAPPEDKES(0.003)ES(0.043)EAKVDGET(0.61)AS(0.334)DS(0.009)ES(0.003)R 147.43 1.7403e-36 1382470000.0 13459.2 14341.599999999999 13419.0 13499.0 16610.1 15278.3 14835.6 16014.300000000001 15621.699999999999 17686.7 18111.1 True False 14825.568075860649 15550.216963849578 14329.694035002236 14332.802571546647 15443.463877734217 15153.878590304226 15400.176876351814 15694.882223524695 14965.174274925092 16569.958743568888 15883.54951572214 0.9333913720724539 0.9790139759666052 0.9021720252653956 0.9023677331920988 0.9722929917174805 0.9540612175700616 0.9695677191743656 0.9881218431679459 0.9421807298244007 1.0432151029697307 1.0 13.955245728837873 -6.791162009534627 24.354309233974572 0.9715987668724699 0.930858668630995 0.35470452061225277 0.03211646645877681 138.38337486222662 113388.9784523146 0.004082289297302532 0.00771569719423118 1.6174765404410068e-07 6.791162009534627 -0.040740098241474954 VAHEPVAPPEDKESESEAKVDGETAS(ph)DSESR ddPTM_A549_MK2206_60min_R1 2 VAHEPVAPPEDKESESEAKVDGETASDSESR 31 2 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VAHEPVAPPEDKESESEAKVDGET(0.21)AS(0.79)DSESR;VAHEPVAPPEDKESESEAKVDGET(0.167)AS(0.832)DSESR 212.22 5.0646e-91 180303000.0 4153.2 4217.1 4059.0 4818.0 6234.4 4145.8 3589.5 4632.9 7506.4 6347.299999999999 5813.9 True False 4854.158624008874 4431.732377309551 4634.627234725578 5998.410216288236 5317.328018659742 4584.5058042406845 4241.665686759418 5289.627762661202 5806.212385257648 4913.440521608698 4370.148174522923 1.1107537845759174 1.0140920170958165 1.0605194720271762 1.3725873761575753 1.2167386107543643 1.0490504260169993 0.9705999699249258 1.2104000943260136 1.3286076703546776 1.1243189762427415 1.0 12.09346648132739 VAHFLEK ddPTM_A549_PD325901_60min_R1 1 VAHFLEK 7 0 P35606;P35606-2 P35606 COPB2 Coatomer subunit beta 0 55.717 0.042304 1346400.0 619.99 495.48 828.05 917.63 841.94 726.1 750.58 1014.9 1254.2 822.85 1055.5 False True 682.930928387485 537.2358384872115 884.2464524691558 974.3099210110636 782.8050389353186 720.1868823376881 779.1437326331358 994.6570233263517 1201.4903355979866 770.89511057154 925.680191365777 0.7377611995562612 0.5803687315535587 0.9552396829022682 1.0525340502031666 0.8456538729432506 0.778008311137243 0.8416986124371563 1.074514754235806 1.297954030781701 0.8327877357234336 1.0 9.854370039823431 -8.314494149499653 3.9841439500216445 1.142262341917469 0.8290851688920479 0.2598997477123719 0.15958789983631294 0.154753332541518 5.130987193380787 0.026242215580961844 0.03235187205325394 4.847366426009417e-09 8.314494149499653 -0.31317717302542103 VAHSDKPGS(ph)TSTASFR ddPTM_A549_MK2206_60min_R1 1 VAHSDKPGSTSTASFR 16 1 Q9P0L0;Q9P0L0-2 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A 1 VAHSDKPGS(0.887)T(0.112)S(0.001)TASFR 109.65 2.26e-07 6896200.0 1054.7 1137.0 1247.5 1025.0 1235.9 877.73 1301.1 1166.2 1084.7 1535.1 1892.5 True False 1232.7075750607132 1194.8684434803445 1424.4142585169152 1276.125046013999 1054.1007471868302 970.6108060099807 1537.4930282888083 1331.5124213377144 839.0171819099655 1188.319843826747 1422.540019657138 0.8665538811047451 0.839954185449442 1.0013175297945074 0.8970749703910418 0.7409990106576338 0.6823082602933859 1.0808082774777588 0.9360105184658615 0.5898021639575288 0.8353507299662172 1.0 10.47425352443384 -6.566678461348103 22.330122549562912 0.8198891207463039 0.905152040648598 0.03689414476781283 0.1372861996722281 122.1253037814803 62261.533996343554 0.025117946994556998 0.05228695740652385 2.7121989197347325e-07 6.566678461348103 0.08526291990229407 VAHSDKPGS(ph)TSTASFR ddPTM_A549_PD325901_60min_R1 2 VAHSDKPGSTSTASFR 16 1 Q9P0L0;Q9P0L0-2 Q9P0L0 VAPA Vesicle-associated membrane protein-associated protein A 1 VAHSDKPGS(0.966)T(0.034)STASFR;VAHS(0.007)DKPGS(0.888)T(0.074)S(0.023)T(0.007)AS(0.001)FR 164.02 4.157100000000001e-21 22142000.0 4449.7 4243.5 4814.1 5053.9 5777.5 5105.799999999999 4709.3 4752.5 5791.5 6412.3 7028.4 True False 4901.430268303995 4601.114637564542 5140.813775535005 5366.067924760321 5371.7083312929735 5064.220057622592 4888.514988527838 4657.707659235873 5548.103395483761 6007.426283670036 6163.951356698457 0.7951766626090484 0.746455377614952 0.8340127100367862 0.8705565008927165 0.8714715643327487 0.8215866356763555 0.7930813703153929 0.755636667082759 0.9000887700800162 0.9746063743902972 1.0 12.589639761419585 -9.399106409487322 1.0430460159822375 0.9786424101962777 0.8139679669286157 0.7013642195203391 0.04307331060585329 0.18280181220807917 0.4173585832561887 0.01283170300853832 0.009898766151560275 3.9892714649424634e-10 9.399106409487322 -0.164674443267662 VAIDAGYR ddPTM_A549_MK2206_60min_R1 4 VAIDAGYR 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ;;; 183.9 4.3299e-09 86097000.0 19787.0 21944.000000000004 19796.6 18000.6 27175.600000000002 22039.3 20455.7 20966.0 31731.399999999998 30367.5 29745.2 False True 23126.561854296328 23060.855869597788 22604.055559243247 22410.74780807765 23178.105239299628 24371.484097496683 24172.235907130394 23937.994705682137 24544.28856463345 23507.460658855292 22358.645914243338 1.0343453688116147 1.031406640547365 1.0109760513199761 1.002330279482673 1.036650668747979 1.090025048519199 1.0811135879982665 1.0706370500922282 1.0977538022102569 1.0513812307336605 1.0 14.448545197786014 -7.0019140963300845 24.051240593183202 1.0552664370629092 1.0199086590071782 0.3660123576738449 0.026485940000137684 70.27863927920097 883116.3155216249 0.005722048202255116 0.010684498556671198 9.956023285244408e-08 7.0019140963300845 -0.03535777805573104 VAIDAGYR ddPTM_A549_PD325901_60min_R1 2 VAIDAGYR 8 0 O60218 O60218 AKR1B10 Aldo-keto reductase family 1 member B10 0 ; 200.12 1.5199e-14 153351000.0 14649.3 14247.4 13230.599999999999 13873.1 16620.6 16057.7 14278.599999999999 14662.900000000001 16686.9 15475.900000000001 17949.9 False True 16136.486151755325 15448.078399254657 14128.508078060991 14730.009878903902 15453.226393957235 15926.931415113462 14821.979936549722 14370.436956677471 15985.607623257874 14498.749032866393 15742.176093791144 1.0250480019798343 0.981317850036471 0.8974939674085721 0.9357035387701926 0.9816448692917447 1.011736326682001 0.9415458096924506 0.9128621653740299 1.0154636517859015 0.9210130128441919 1.0 13.942347362753384 -8.803732171555156 24.99853335571727 1.0073023005450659 0.960383257920369 0.0 0.04517845171828241 148.1904931212455 87592.17571630699 0.006597537222613126 0.0070236400960522515 1.5713315422745368e-09 8.803732171555156 -0.046919042624696816 VAIDVGYR ddPTM_A549_MK2206_60min_R1 2 VAIDVGYR 8 0 P15121;E9PCX2;E9PEF9 P15121 AKR1B1 Aldose reductase 0 ; 114.6 0.0036649 6920300.0 2871.6 3274.3 2986.5 2570.0 3540.8999999999996 2963.0 3127.6 2785.5 4146.1 3964.5 4427.2 False True 3356.2558761205505 3440.947884333941 3410.030607663938 3199.6501153716845 3020.038300601866 3276.542693319781 3695.844435689859 3180.3531552359823 3207.0149699611957 3068.9166965351715 3327.8040554959452 1.0085497283344 1.0339995465331369 1.024708952449347 0.9614899381132096 0.9075168640455867 0.9845960395139537 1.110595568145332 0.9556912312741358 0.963703065589074 0.922204746841024 1.0 11.700354773283337 -6.240056209065006 23.042304013157263 0.983298639879505 1.02357744529249 0.1333122141692371 0.05037854569822106 508.4803603969776 547929.5083777984 0.006631060256022161 0.01751907712724069 5.7536546517796e-07 6.240056209065006 0.0402788054129849 VAIDVGYR ddPTM_A549_PD325901_60min_R1 2 VAIDVGYR 8 0 P15121;E9PCX2;E9PEF9 P15121 AKR1B1 Aldose reductase 0 ; 116.9 0.0035318000000000003 5159500.0 3320.3 2559.5 3090.4 2458.6000000000004 3686.2 3312.2 2687.8 2941.7 3419.4 3246.0 3473.4 False True 3657.3744117243277 2775.198047566032 3300.133128084873 2610.462138114274 3427.294028699637 3285.2265413564105 2790.0856998205936 2883.0254857809937 3275.694509283809 3041.0470060341754 3046.193819696719 1.2006374604516985 0.9110379088886513 1.0833628204305912 0.856958648276088 1.1251070127379026 1.0784693081950674 0.9159252053430981 0.9464353407650303 1.0753401468098112 0.9983104116260547 1.0 11.572792023538947 -10.795946401137732 0.0019607848947237067 0.6155645561666891 1.4287095321969479 0.0015518094162733087 0.09977192386375358 2360585.262550336 1013.5914870531204 212262.55380343227 208088.41607932534 1.5997554517567016e-11 10.795946401137732 0.8131449760302587 VAILT(ph)DDEEEQKR ddPTM_A549_MK2206_60min_R1 1 VAILTDDEEEQKR 13 1 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 VAILT(1)DDEEEQKR 44.806999999999995 0.033004 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VAILT(ph)DDEEEQKR ddPTM_A549_PD325901_60min_R1 1 VAILTDDEEEQKR 13 1 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 VAILT(1)DDEEEQKR 68.173 0.0024617 2555600.0 1460.4 1606.4 1563.0 1567.5 1751.1 974.0 1464.0 1409.9 1457.0 1834.7 1841.1 True False 1608.6587329103418 1741.7769656612911 1669.0745790825306 1664.320914949208 1628.1087769670492 966.0680669286704 1519.7133211315395 1381.7784384548468 1395.7673568539833 1718.8567288881388 1614.656371694487 0.9962855014297246 1.0787291935270404 1.0337026554640445 1.0307585837614481 1.008331435411514 0.5983118661432827 0.9411992221829154 0.855772449592325 0.864436161973713 1.0645340761169508 1.0 10.657011450447579 -7.0234717158110245 24.991180127002387 0.9029863346264202 1.035621918619793 0.2836893346546825 0.11157723529116274 812.831273909128 865450.051661983 0.015946161862574984 0.027734760856933632 9.473888828558501e-08 7.0234717158110245 0.13263558399337283 VAILT(ph)DDEEEQKRK ddPTM_A549_MK2206_60min_R1 4 VAILTDDEEEQKRK 14 2 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 VAILT(1)DDEEEQKRK;VAILT(1)DDEEEQKRK;VAILT(1)DDEEEQKRK;VAILT(1)DDEEEQKRK 137.19 1.1139e-09 22822200.0 5042.61 4549.6 4342.23 4196.7 7398.300000000001 5861.9 4587.45 5144.92 8085.8 6959.5 6984.9 True False 5893.679288022095 4781.155207087227 4958.023507623169 5224.8916883970205 6310.019870468747 6482.202367185701 5420.930284085385 5874.228165656689 6254.379210369322 5387.3441164173355 5250.356556567049 1.1225293414883204 0.9106343836985787 0.9443212959359427 0.9951498783186111 1.2018269240355288 1.2346213628249463 1.0324880273712052 1.1188246174079957 1.1912294227991926 1.0260910965520895 1.0 12.358199685521592 -6.628176740938193 9.046055545495639 1.1074698434769272 0.9819521266526994 0.3105189405314691 0.08648951341344673 0.2846567453472188 22.339631314765114 0.013868837849555383 0.0289024510574313 2.354091065559557e-07 6.628176740938193 -0.12551771682422785 VAILT(ph)DDEEEQKRK ddPTM_A549_PD325901_60min_R1 1 VAILTDDEEEQKRK 14 2 Q6ZSS7;C9JAZ7;C9J134;C9JJH2 Q6ZSS7 MFSD6 Major facilitator superfamily domain-containing protein 6 1 VAILT(1)DDEEEQKRK 159.34 1.4611e-19 17204000.0 3064.0 2845.5 2917.4 2704.5 3502.9 2688.3 3021.4 2731.0 3271.7 2687.4 3450.6 True False 3375.055024402416 3085.30027128312 3115.3923077513628 2871.5508226348547 3256.8683883489666 2666.407376103023 3136.3810303735213 2676.528062571945 3134.201826643224 2517.717105365448 3026.198075155611 1.1152789541804418 1.0195301809926864 1.0294740233060142 0.9488971809907704 1.076224459689901 0.8811080140436323 1.0364096970791459 0.8844523709619749 1.0356895843581089 0.8319736655823441 1.0 11.563290704699375 -4.910883074933132 1.450631690106329 1.0002601455502327 1.2709297789358205 0.14896282946383643 0.07841317655433228 3.0756512419311104 2.9662954299982136 0.00790968323398429 1.5383096392298072 1.227769739008772e-05 4.910883074933132 0.2706696333855878 VAKS(ph)PK ddPTM_A549_MK2206_60min_R1 2 VAKSPK 6 1 P16403;P16401 P16403;P16401 HIST1H1C;HIST1H1B Histone H1.2;Histone H1.5 1 VAKS(1)PK;VAKS(1)PK 53.166000000000004 0.024376 1171120000.0 16865.4 15591.8 13755.5 10626.5 17947.4 22203.7 23189.1 25023.4 15417.4 17183.2 16968.1 True False 19711.867200558412 16385.356022037657 15706.236739903336 13229.992977041718 15307.361234777029 24553.280796376792 27402.2593054277 28570.543580948517 11925.383516528718 13301.503185749305 12754.452474263817 1.5454890941287682 1.2846773356285068 1.231431672319583 1.0372842741573938 1.2001582400863167 1.9250752508522715 2.148446541372161 2.240044693302101 0.9349976834044417 1.0428909600462535 1.0 13.638713347512267 -5.26170992589063 2.8450041322478254 1.2291295760171914 1.6021337851539306 0.0 0.48268340817622096 1.6578261599250015 18.49467862167507 0.07819897906698442 1.4238478076275185 5.473814480148894e-06 5.26170992589063 0.37300420913673915 VAKS(ph)PK ddPTM_A549_PD325901_60min_R1 2 VAKSPK 6 1 P16403;P16401 P16403;P16401 HIST1H1C;HIST1H1B Histone H1.2;Histone H1.5 1 VAKS(1)PK;VAKS(1)PK 53.166000000000004 0.024376 1301260000.0 23452.0 24095.0 22304.8 21505.5 25197.0 17833.0 15816.2 17803.6 18595.2 22945.0 22928.0 True False 25832.829775550083 26125.57021140987 23818.537857658375 22833.84589246584 23427.249644931035 17687.773960512306 16418.09414595674 17448.493231345998 17813.708410549887 21496.248784181807 20108.001352567066 1.2847040002935033 1.2992624057126683 1.1845303488910701 1.1355601927861807 1.1650710199470034 0.8796385901502943 0.8164955759693513 0.8677388132917773 0.8859014925556348 1.0690395533237576 1.0 14.295482070738421 -7.138658297524245 3.4365707436453388 0.9233784293251677 1.2228714768595819 0.7848845865451397 0.07688855175383183 0.09120700539006288 1.9966385618906812 0.0118206783348664 0.02130847137714637 7.266774817037861e-08 7.138658297524245 0.2994930475344142 VAKVS(ph)QGVEDGPDTKR ddPTM_A549_MK2206_60min_R1 2 VAKVSQGVEDGPDTKR 16 2 A0A590UK93;A0A590UKC5;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0QX65;M0QYM8;M0R054 A0A590UK93 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed 1 VAKVS(0.816)QGVEDGPDT(0.184)KR;VAKVS(0.999)QGVEDGPDT(0.001)KR 47.498999999999995 0.0053799 12992100.0 4311.3 5082.8 4497.1 4590.1 6086.0 4497.299999999999 5143.6 4277.2 6744.6 7117.299999999999 7636.1 True False 5038.9420388349845 5341.492809605885 5134.856402385908 5714.674706057417 5190.7574620754485 4973.201300933868 6078.125540163183 4883.506198375635 5216.958868913024 5509.49698682047 5739.845624361359 0.8778880772417359 0.9305986883924606 0.8945983460935389 0.995614704653883 0.9043374685975105 0.8664346789792293 1.0589353682904081 0.8508079342149547 0.9089022963912007 0.9598684960161243 1.0 12.486796220175714 -10.747893013636102 0.9628183224756692 1.0007777933730029 0.9221391170660742 0.12068318668541289 0.057996255135689755 0.6983465360198585 1.1330682746555336 0.03814650081830043 0.009413850106372298 1.7869277217146935e-11 10.747893013636102 -0.07863867630692867 VAKVS(ph)QGVEDGPDTKR ddPTM_A549_PD325901_60min_R1 1 VAKVSQGVEDGPDTKR 16 2 A0A590UK93;A0A590UKC5;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0QX65;M0QYM8;M0R054 A0A590UK93 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed 1 VAKVS(1)QGVEDGPDTKR 58.835 0.0012795999999999999 8264400.0 2103.1 2073.7 2065.3 2012.9 2754.1 2991.7 3035.4 2449.9 2506.6 2615.0 2785.9 True False 2316.6051637796095 2248.457976650782 2205.463677657807 2137.232261372415 2560.661517129203 2967.3365870949733 3150.913808034613 2401.034822590629 2401.2563189363023 2449.888453721308 2443.251961275146 0.9481646594363362 0.9202726580345401 0.9026754966797462 0.8747490210780317 1.0480546246211873 1.2145028978289676 1.2896393241367272 0.9827209230346903 0.9828115794013622 1.0027162538090006 1.0 11.254586934406552 -6.768011328945389 24.97770171008454 1.034273561416418 0.9114666862263416 0.34219286979404173 0.09918326724840214 187.86309900270618 714005.3368824736 0.016568852540099047 0.03183550795876927 1.7060378849559253e-07 6.768011328945389 -0.12280687519007638 VALENDDRS(ph)EEEKYTAVQR ddPTM_A549_MK2206_60min_R1 3 VALENDDRSEEEKYTAVQR 19 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZH85;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 VALENDDRS(1)EEEKYTAVQR;VALENDDRS(1)EEEKYTAVQR;VALENDDRS(1)EEEKYTAVQR 165.85 5.5379e-28 96453000.0 8004.0 9299.400000000001 8889.599999999999 7984.4 12135.500000000002 8911.1 8659.5 8685.4 13750.0 12264.599999999999 14229.8 True False 9354.879520987914 9772.699739051113 10150.278951913395 9940.578358433331 10350.384025799647 9854.066687290555 10232.81905961642 9916.58204792195 10635.64695423807 9494.018341865365 10696.147937499154 0.8746026677689314 0.9136653490729533 0.9489658343568697 0.9293605900478522 0.9676739781723374 0.9212724753687836 0.9566826412097041 0.9271171365493031 0.9943436661857511 0.887610978956331 1.0 13.384803704021964 -2.0000000000002687 0.12469207957275115 1.0291379384997126 0.5816212319302165 0.0 0.04140708132035413 30.850144430697984 0.25265112970259973 0.0710141252019025 2.427610912886012 0.009999999999993814 2.0000000000002687 -0.44751670656949605 VALENDDRS(ph)EEEKYTAVQR ddPTM_A549_PD325901_60min_R1 1 VALENDDRSEEEKYTAVQR 19 2 Q99700;A0A2R8YDM9;A0A5F9ZHW5;A0A5F9ZHX3;A0A2R8Y5A6;A0A2R8Y7E6;A0A5F9ZI57;V9GY86;F8VQP2;A0A2R8Y7P6;H0YH87;Q99700-5;Q99700-2;Q99700-4;F8W0B5;A0A5F9ZH85;A0A5F9ZHH4;F8WB06 Q99700;A0A5F9ZHH4;F8WB06 ATXN2 Ataxin-2 1 VALENDDRS(0.992)EEEKYT(0.008)AVQR 107.83 3.6964999999999996e-10 21511000.0 4840.1 6373.0 5442.6 5424.2 5731.1 5736.1 5057.0 6108.8 7133.4 6473.9 5742.3 True False 5331.4633889067 6910.075076045448 5811.967565012531 5759.240514747999 5328.567307221661 5689.387103397895 5249.446902296579 5986.95519173911 6833.608005066712 6065.136849157311 5036.0335034388445 1.0586632089056043 1.3721265101447238 1.1540764296035444 1.143606473391274 1.0580881369401258 1.1297357532496377 1.042377279402928 1.1888235429035432 1.3569425224038716 1.204347994312537 1.0 12.29807216563091 -11.192803967764984 1.630860118731024 1.0002899524988755 1.1942380489127236 0.0 0.12234047630857972 0.42876561943254454 2.0558660655816547 0.08761489520739156 0.0184759937275976 6.4149907167363356e-12 11.192803967764984 0.19394809641384803 VALHLDEEDKLR ddPTM_A549_PD325901_60min_R1 2 VALHLDEEDKLR 12 1 Q16719-2;Q16719;A0A087X297;B8ZZA3;F8WEP1 Q16719-2 KYNU Kynureninase 0 ; 132.32 2.1039000000000002e-07 16274000.0 1327.8899999999999 1240.4099999999999 1335.2800000000002 1088.0900000000001 1596.23 1397.87 1763.1399999999999 1552.8600000000001 1588.9 1540.3200000000002 1620.8899999999999 False True 1462.696415259049 1344.943703919273 1425.9001304909298 1155.2988480683146 1484.1163114945539 1386.4862101823205 1830.2372575272282 1521.8869891048964 1522.1240585485893 1443.0639323273444 1421.5308056682838 1.0289586475555923 0.9461235019011733 1.0030736757903687 0.8127146055939256 1.04402683753086 0.9753472838251378 1.2875114983292992 1.0705972624978983 1.0707640330263648 1.0151478438407373 1.0 10.473229648329868 -6.95901001312729 24.99976973804932 1.0530321732394878 0.948659281558654 0.2694890736251211 0.09233455994021937 177.54400917294532 108283.24378926946 0.01335593087020002 0.025240312374105577 1.0989805009606739e-07 6.95901001312729 -0.10437289168083386 VALS(ph)DDETK ddPTM_A549_MK2206_60min_R1 1 VALSDDETK 9 0 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 VALS(0.923)DDET(0.077)K 136.49 4.4491000000000005e-05 14261000.0 4173.5 4259.3 4140.3 3879.5 5576.8 5513.4 4487.8 4963.7 6077.8 5149.8 5255.7 True False 4877.884767721525 4476.080177058776 4727.456797224511 4829.9776741573705 4756.460107542288 6096.824328501279 5303.175168975877 5667.319675693717 4701.188004252226 3986.456603308567 3950.5646400591886 1.234731035219422 1.133022892897587 1.1966534477850446 1.2226043905675736 1.2039950085390896 1.543279223096052 1.3423841025662657 1.4345594091098854 1.1900040709577635 1.009085274263185 1.0 11.947843151925582 -9.720921571209727 1.0759243399175185 1.0340027060509853 1.2817726823289155 0.45219282420064766 0.11534538059821844 0.3164962277853078 0.7532703660460305 0.03743031081842489 0.024508414056389982 1.9014216246803101e-10 9.720921571209727 0.24776997627793018 VALS(ph)DDETKETENMR ddPTM_A549_MK2206_60min_R1 8 VALSDDETKETENMR 15 1 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 VALS(0.958)DDET(0.028)KET(0.014)ENMR;VALS(0.97)DDET(0.013)KET(0.016)ENMR;VALS(0.999)DDET(0.001)KETENMR;VALS(0.998)DDET(0.001)KETENMR;VALS(0.98)DDET(0.013)KET(0.007)ENMR;VALS(1)DDETKETENMR;VALS(0.567)DDET(0.338)KET(0.094)ENMR;VALS(1)DDETKETENMR 185.12 2.0908999999999997e-33 1155312600.0 64987.3 63846.3 59680.4 50663.9 74816.8 59339.6 54407.6 57522.200000000004 85323.40000000001 87515.8 87023.7 True False 75955.56745306074 67095.8039604037 68143.97812744927 63076.5577743889 63811.34782921572 65618.87708556144 64292.75665661839 65676.1480043494 65997.78613347179 67745.91999763717 65413.31355806436 1.1611637344382273 1.0257209169024266 1.0417447828408972 0.9642770614027796 0.9755100966192969 1.0031425334739328 0.9828695896829733 1.0040180573646025 1.0089350706089613 1.0356595058818152 1.0 15.997296676578983 -4.784526974513692 1.332166497476814 0.9993197015040378 1.475633381657621 0.8217532722779042 0.021367873329126517 1.015879676513506 0.6513846476792575 0.002617455281400962 0.8948636897619753 1.642377646602811e-05 4.784526974513692 0.4763136801535832 VALS(ph)DDETKETENMR ddPTM_A549_PD325901_60min_R1 6 VALSDDETKETENMR 15 1 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 VALS(0.974)DDET(0.013)KET(0.013)ENMR;VALS(0.979)DDET(0.019)KET(0.003)ENMR;VALS(0.948)DDET(0.049)KET(0.003)ENMR;VALS(0.998)DDET(0.002)KETENMR;VALS(0.993)DDET(0.007)KETENMR;VALS(1)DDETKETENMR 226.93 3.0041000000000005e-54 1385490000.0 61693.6 59161.3 56100.1 57914.6 68713.5 55510.299999999996 59169.0 60525.00000000001 62761.5 69663.3 71151.6 True False 67956.688855572 64147.030377600386 59907.390143306446 61491.85330840023 63887.300808706146 55058.24252118127 61420.70867351914 59317.781394056015 60123.85241399535 65264.74734918689 62400.40426715421 1.0890424453763108 1.0279906217108523 0.9600481094132908 0.9854399828106206 1.0238283158420913 0.8823379137971764 0.9842998518176147 0.9505993124675828 0.9635170335850345 1.0459026366202628 1.0 15.929267755308917 -5.458881674295417 2.673800946679056 0.9754924668834718 1.0920313572923452 0.40959454262865336 0.040373499941558505 0.2030561004340832 2.4048968845039176 0.004694773787878972 0.04234318581659883 3.4763086230956187e-06 5.458881674295417 0.11653889040887344 VALS(ph)DDETKETENMRK ddPTM_A549_MK2206_60min_R1 4 VALSDDETKETENMRK 16 2 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 VALS(0.998)DDET(0.002)KETENMRK;VALS(0.992)DDET(0.008)KETENMRK;VALS(0.999)DDET(0.001)KETENMRK;VALS(1)DDETKETENMRK 126.22 2.8684999999999998e-09 109632000.0 15719.600000000002 18355.0 17153.300000000003 16650.0 23274.8 16867.9 15505.000000000002 16221.499999999998 25261.6 26451.800000000003 28273.199999999997 True False 18372.68417267886 19289.191099456224 19585.89587223904 20729.2507474469 19851.107751941123 18652.849981994168 18322.057800029186 18520.94730126027 19539.88793448585 20476.320008427054 21252.184139376594 0.8645080454877802 0.9076333506689656 0.9215944932431576 0.9753938988811606 0.9340737696301284 0.8776909638870335 0.8621258727982507 0.8714844168390289 0.9194296363300298 0.9634924991303836 1.0 14.37532349774667 -10.199661627047353 0.8424654422114574 0.9954423049058324 0.9049737034469895 0.42757076550075446 0.03401998362850607 0.3674026178800176 0.5099231140221444 0.0179779238369253 0.007167751438003921 6.314491354241679e-11 10.199661627047353 -0.09046860145884295 VALS(ph)DDETKETENMRK ddPTM_A549_PD325901_60min_R1 6 VALSDDETKETENMRK 16 2 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 VALS(0.995)DDET(0.005)KETENMRK;VALS(0.987)DDET(0.013)KETENMRK;VALS(0.988)DDET(0.012)KETENMRK;VALS(0.998)DDET(0.002)KETENMRK;VALS(1)DDETKETENMRK;VALS(0.979)DDET(0.017)KET(0.004)ENMRK 157.98 5.6001000000000005e-21 117949600.0 24284.199999999997 23882.5 24084.9 27594.0 29635.5 33179.3 27885.1 28199.6 31705.4 30830.4 33158.600000000006 True False 26749.514106916817 25895.162090641054 25719.446148269275 29298.418709479065 27554.00471692478 32909.098781361856 28946.282739812206 27637.13685584177 30372.932296498497 28883.763282451033 29080.302409683794 0.9198499290024295 0.890470866699719 0.8844284280793673 1.0075004825163936 0.9475143803095131 1.1316628801770323 0.9953913935287358 0.9503730898836373 1.044450359167663 0.9932415033219423 1.0 14.827754651650238 -6.372867746524904 2.3908684136607987 1.0182872260146236 0.8958558411109999 0.49154492762333857 0.04874467258781022 0.17101799036444462 1.8896723862869629 0.006726647673247959 0.018664215707777074 4.237719955183915e-07 6.372867746524904 -0.12243138490362371 VALSDDET(ph)K ddPTM_A549_MK2206_60min_R1 1 VALSDDETK 9 0 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 VALS(0.171)DDET(0.829)K 131.52 5.1523e-05 12167000.0 4390.0 4915.7 4281.2 3735.6 6551.4 5339.6 5358.0 5795.8 6519.2 5294.3 5039.9 True False 5130.9246748047135 5165.888133347692 4888.338535921936 4650.822167697455 5587.697738587099 5904.632927860377 6331.479244924627 6617.372398893091 5042.611609023186 4098.313952948961 3788.3537358361978 1.354394291712617 1.363623487553607 1.290359580120609 1.22766312018402 1.4749672623572292 1.5586276624606323 1.6713009624818176 1.7467672926885345 1.3310825653164984 1.0818192383094198 1.0 11.887355332762437 -9.895454152109393 1.0301970820302893 1.0480207707198277 1.448674760782607 0.5039593233733755 0.15424606426884718 0.29249274447576484 0.632107205687916 0.05880328330396982 0.03394345849650733 1.2721720445069842e-10 9.895454152109393 0.40065399006277924 VALSDDET(ph)KETENMR ddPTM_A549_MK2206_60min_R1 2 VALSDDETKETENMR 15 1 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 VALS(0.026)DDET(0.769)KET(0.205)ENMR;VALS(0.27)DDET(0.73)KETENMR 238.45 7.051499999999999e-65 177741000.0 15403.1 15748.1 14003.9 12700.1 18807.4 14092.1 13649.2 15695.8 21352.0 19677.0 21474.2 True False 18002.766710360935 16549.611024426384 15989.863595066141 15811.625070129152 16040.856374012123 15583.3166684211 16129.082961893464 17920.727716371533 16515.80609213755 15231.95203372998 16141.563482230553 1.1153050155382587 1.0252793072148823 0.9906019087103048 0.9795596992531354 0.993761006588408 0.9654155674309989 0.9992268084593646 1.1102225466634366 1.0231850285332633 0.94364787218401 1.0 13.978492705303694 -5.275887574137701 3.6614671028513097 1.0096440239764057 1.125393092702724 0.3799431236634715 0.040843951983248854 0.19388011675136774 4.779280895170307 0.005009803324563339 0.059599379955469954 5.298005756769705e-06 5.275887574137701 0.1157490687263183 VALSDDET(ph)KETENMR ddPTM_A549_PD325901_60min_R1 1 VALSDDETKETENMR 15 1 H0YD46;Q15054-3;Q15054-2;Q15054 H0YD46 POLD3 DNA polymerase delta subunit 3 1 VALS(0.453)DDET(0.471)KET(0.076)ENMR 105.17 2.1956e-06 40282000.0 4962.1 4951.9 5301.6 6311.7 6330.4 6183.4 5362.6 5497.2 5478.5 6057.4 7243.5 True False 5465.848739095049 5369.21399169456 5661.398457110648 6701.559374089263 5885.774542694425 6133.044440499735 5566.676677527315 5387.5540335300275 5248.257696996947 5674.934730237647 6352.595420329708 0.860411906856704 0.8452000539042499 0.8911945563214877 1.054932500918096 0.9265149365342309 0.9654391685125483 0.8762838350625511 0.848087069465917 0.8261596008776765 0.8933253819496522 1.0 12.633130425370087 -11.083212359502008 1.4384991107632412 0.9994472067391628 0.8929378944238114 0.0 0.06941994662669355 0.4856686201512983 1.8100979837828366 0.04879406134051202 0.010965150046737078 8.256341357260446e-12 11.083212359502008 -0.10650931231535132 VALSS(ph)ETEVALAR ddPTM_A549_PD325901_60min_R1 1 VALSSETEVALAR 13 0 E7EVA0;P27816;P27816-6;P27816-2 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VALS(0.001)S(0.998)ET(0.001)EVALAR 208.27 2.8098e-37 8015000.0 1520.8 1573.9 1402.5 1573.4 1623.9 1775.3 1558.3 1799.5 1904.5 2101.1 1641.2 True False 1675.190496446213 1706.5380766025298 1497.6820839176266 1670.5853445493365 1509.8428661508715 1760.8425453988393 1617.6019592344783 1763.6075608195592 1824.4604880771515 1968.4361874240305 1439.3428044239827 1.163857901882252 1.1856369944375253 1.040531886715473 1.1606584195332785 1.0489807303098324 1.223365649924876 1.1238476020185018 1.2252866762517673 1.2675649487178913 1.3675937249790804 1.0 10.491194520481448 VANPSGNLTETYVQDR ddPTM_A549_PD325901_60min_R1 2 VANPSGNLTETYVQDR 16 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 138.77 2.2553999999999998e-10 5845100.0 5228.4 5744.799999999999 5346.5 5062.5 6234.1 5696.6 4900.6 5600.6 6434.4 5872.299999999999 6514.799999999999 False True 5759.183319055352 6228.934457377354 5709.345641116288 5375.199127228301 5796.23832247746 5650.208778301712 5087.095014711216 5488.891639414296 6163.984544228738 5501.521975827012 5713.520900719812 1.0079919928760193 1.0902094462615177 0.9992692317616274 0.9407857642650983 1.014477486508753 0.9889188954554934 0.8903607955770887 0.9606846172073658 1.0788416899730209 0.9628952219521782 1.0 12.480164350839352 -8.750374594100599 24.99966098280796 1.0372308000798096 0.9867372116539284 0.0 0.054615744132785346 314.3771218497634 710299.4181242549 0.009580213659881069 0.010812809890468388 1.7767462434777364e-09 8.750374594100599 -0.05049358842588125 VAPEEHPVLLTEAPLNPK ddPTM_A549_MK2206_60min_R1 7 VAPEEHPVLLTEAPLNPK 18 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;I3L3R2;K7EM38;J3KT65 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;;;; 238.32 2.3960999999999997e-74 398847200.0 13019.7 14561.28 12959.91 13698.02 20367.86 16191.73 14628.31 14552.98 21291.78 19933.79 20343.797 False True 15217.107058896352 15302.386955744472 14797.820114706163 17054.03551492749 17371.77477514098 17905.12812139949 17286.084575088353 16615.90948163207 16469.22582598597 15430.732994381598 15291.87074466621 0.9951108868876664 1.0006876994485407 0.9676919431108603 1.1152353953080543 1.1360137072307022 1.1708919346996693 1.1304100632107241 1.0865844839440382 1.0769922203096323 1.0090807888736455 1.0 13.900477290431224 -6.249772631579659 24.812016581730433 1.0683422664853282 0.9891159254236185 0.38587415366691735 0.05254111767711977 810.8000936694498 1724347.7096431889 0.00917886942725501 0.024057168562979604 5.626358077113617e-07 6.249772631579659 -0.07922634106170967 VAPEEHPVLLTEAPLNPK ddPTM_A549_PD325901_60min_R1 3 VAPEEHPVLLTEAPLNPK 18 0 P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;E7EVS6;A0A2R8YGF8;G5E9R0;I3L4N8;I3L3R2;K7EM38;J3KT65 P60709 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;; 209.13 2.5936e-55 787551120.0 4211.8 4470.299999999999 3995.7999999999997 4566.3 5357.299999999999 5134.5 4640.3 4560.3 5226.4 5282.700000000001 5794.200000000001 False True 4639.378835436717 4847.027869519213 4266.9790166973635 4848.349980180265 4981.021729681669 5092.686334338052 4816.889155769591 4469.341239013858 5006.752583295579 4949.14942044878 5081.550132460052 0.9129849582317762 0.9538482831365271 0.8397002696953926 0.9541084617486808 0.9802169810081721 1.0021914970014492 0.9479172752818371 0.8795232010926134 0.9852805645492545 0.9739448183015023 1.0 12.311052944508903 -4.427248516293582 0.10357872683389939 1.0430368293575918 0.7583403641050461 0.18115441542574917 0.04437860335499427 53.56587236821781 0.6668592250452051 0.3355859256588352 2.208751782921823 3.7389657224171336e-05 4.427248516293582 -0.28469646525254566 VAPERDGKS(ph)PTVPCLQEEAGEPLGGK ddPTM_A549_MK2206_60min_R1 1 VAPERDGKSPTVPCLQEEAGEPLGGK 26 2 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 VAPERDGKS(0.797)PT(0.203)VPCLQEEAGEPLGGK 72.842 5.985e-06 8756400.0 2088.0 2165.5 1928.9 2124.8 2707.0 2053.2 2300.5 1904.6 3119.0 3085.1 3529.9 True False 2440.403353301196 2275.714700401657 2202.4470246519254 2645.3760953858955 2308.8038859412163 2270.4682611961452 2718.4710718456704 2174.5828825928725 2412.551480019529 2388.1737673049947 2653.328409716107 0.9197517142487112 0.857683011295668 0.830069514420786 0.9970028910476775 0.8701538330071424 0.8557057064184053 1.0245513001296862 0.8195679338561569 0.9092547576037374 0.9000671603861194 1.0 11.373587537592488 -10.593621228901647 0.5137782708079827 1.0183443703156028 0.8943586504907866 0.0 0.06834825913019381 1.3675766121378268 0.5208192384785023 0.08267383429432543 0.014230576961652204 2.5490524463326346e-11 10.593621228901647 -0.12398571982481621 VAPVINNGS(ph)PTILGK ddPTM_A549_MK2206_60min_R1 3 VAPVINNGSPTILGK 15 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 VAPVINNGS(0.937)PT(0.063)ILGK;VAPVINNGS(0.958)PT(0.042)ILGK;VAPVINNGS(0.991)PT(0.009)ILGK 243.99 7.581799999999999e-65 104729600.0 21329.77 24569.0 22993.9 19962.9 30148.3 22772.48 22871.5 22304.5 31411.3 28058.8 29402.1 True False 24929.71371319121 25819.457157316243 26254.780776683045 24853.811396168654 25713.525007211527 25182.248718451177 27026.955496508697 25466.231179666465 24296.690703538767 21720.29759231707 22100.747113321606 1.1280032111749017 1.1682617345434951 1.187958969986925 1.1245688332946713 1.1634685866213208 1.1394297482039484 1.2228978214142694 1.1522791989378611 1.099360604370407 0.9827856714954576 1.0 14.431807520137443 -9.60489180633415 0.722766402665127 1.010595206382197 1.16331131737642 0.8107650715880674 0.030581822323509842 0.18192213633933568 0.2043136291917612 0.011962465561570148 0.006934190324186915 2.483751793195873e-10 9.60489180633415 0.152716110994223 VAPVINNGS(ph)PTILGK ddPTM_A549_PD325901_60min_R1 5 VAPVINNGSPTILGK 15 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 VAPVINNGS(0.921)PT(0.079)ILGK;VAPVINNGS(0.984)PT(0.016)ILGK;VAPVINNGS(0.999)PT(0.001)ILGK;VAPVINNGS(0.997)PT(0.003)ILGK;VAPVINNGS(1)PTILGK 287.65 3.2889999999999993e-107 173346500.0 41812.799999999996 41579.50000000001 42452.299999999996 39736.399999999994 46629.4 41963.700000000004 42761.799999999996 45622.100000000006 45452.5 43423.2 46529.9 True False 46057.60467504354 45083.55038826794 45333.368364418035 42190.827180087836 43354.31180669712 41621.9615402204 44389.12369915479 44712.13142565492 43542.2894903265 40681.45174135031 40807.017277338186 1.1286687375855138 1.1047989634200657 1.110920900106892 1.033911076944066 1.0624229531907874 1.0199706892896283 1.087781628279063 1.0956971229182537 1.0670294570759358 0.9969229425631752 1.0 15.31652964254794 -14.999999999999998 0.09710025171994091 0.7508680361400987 1.135265667987085 0.5679258999205261 0.02876686658074581 70.30823626862838 0.49317527783710186 3.6056819353276572 0.2367104301932101 1.000000000000004e-15 14.999999999999998 0.3843976318469863 VAPVINNGS(ph)PTILGKR ddPTM_A549_MK2206_60min_R1 2 VAPVINNGSPTILGKR 16 1 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 VAPVINNGS(0.968)PT(0.032)ILGKR;VAPVINNGS(0.9)PT(0.1)ILGKR 133.16 1.4059999999999998e-10 14422000.0 5543.9 8098.700000000001 7610.6 7087.6 10841.5 7271.8 6517.9 5391.4 11607.5 11132.5 12627.5 True False 6479.574784658282 8510.889237655465 8689.897519734528 8824.062318174456 9246.72971164821 8041.29704936982 7702.118060935839 6155.647460470027 8978.419783368612 8617.660518142966 9491.743248729466 0.6826538197317564 0.8966623953713355 0.9155217637073916 0.9296566591553787 0.9741866661728283 0.8471886394995147 0.8114545304380014 0.648526545563061 0.9459189474568261 0.9079112542679131 1.0 13.212457360879311 -8.979044338265814 24.6846800725214 0.9761408694788322 0.8464584130222195 0.2040359074160386 0.09675928592355384 121.83090973224877 143512.52040030892 0.01727451013959801 0.017671764858799458 1.0494352835750317e-09 8.979044338265814 -0.1296824564566127 VAQGATEKS(ph)PEDKVQIAANEETQER ddPTM_A549_PD325901_60min_R1 2 VAQGATEKSPEDKVQIAANEETQER 25 2 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 VAQGAT(0.051)EKS(0.949)PEDKVQIAANEETQER;VAQGAT(0.497)EKS(0.503)PEDKVQIAANEETQER 69.094 2.7533000000000002e-05 17045000.0 6966.9 7759.3 7749.8 7775.7 8577.2 7283.7 6680.6 8070.599999999999 7330.9 8426.0 8680.0 True False 7674.174559239296 8413.20344226572 8275.748031333207 8255.98732910402 7974.767061733634 7224.3839621030365 6934.833888764593 7909.62555173678 7022.807766891469 7893.98092200984 7612.4150270534765 1.0081130011916501 1.1051950547055502 1.0871383131269559 1.0845424611983683 1.0476001417936895 0.9490265489241678 0.9109899899203009 1.0390428692638352 0.922546621792608 1.036987722550034 1.0 12.894138503808117 -7.144750237940568 4.0614115299054765 0.9636659858872324 1.0739174594428995 0.4849475028096538 0.045506902859599546 0.12447812305005314 3.5438022622612375 0.006302449280349243 0.011198644430258855 7.165553815892777e-08 7.144750237940568 0.11025147355566711 VAQLEQVYIR ddPTM_A549_PD325901_60min_R1 2 VAQLEQVYIR 10 0 P62318-2;P62318 P62318-2 SNRPD3 Small nuclear ribonucleoprotein Sm D3 0 ; 104.22 0.00097335 5827800.0 3965.5 3665.3 4060.5 4428.2 4756.200000000001 4566.9 4236.9 4752.6 5021.1 4904.0 4567.1 False True 4368.074640753194 3974.187694371468 4336.069947770069 4701.71985682812 4422.140919999245 4529.708680550869 4398.137548020643 4657.805664657427 4810.080628345599 4594.360603078124 4005.3756532322477 1.0905530514293351 0.9922134746997796 1.082562616635211 1.1738524083337698 1.1040514805223518 1.1309073287284543 1.098058691316867 1.1628885947061378 1.2009062432044226 1.1470486168683276 1.0 11.96772184006519 -5.992127734615327 23.78286675564406 1.109963948801955 1.040384411780698 0.22849364756806811 0.0556557978305693 172.9022749510188 522333.3875202884 0.010571348228902018 0.032764589025213835 1.0182918441903308e-06 5.992127734615327 -0.06957953702125708 VAQLLER ddPTM_A549_PD325901_60min_R1 1 VAQLLER 7 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 0 73.616 0.05251 2906600.0 1388.2 1158.9 792.52 1209.7 1064.8 1242.2 1203.5 1140.6 1433.1 1104.2 1224.8 False True 1529.1290420611733 1256.564570159904 846.3051730099094 1284.420421571967 990.0121213605811 1232.0839350500974 1249.2998510804691 1117.8498382166104 1372.871790739495 1034.480623556049 1074.1573646468996 1.4235614746856327 1.1698142297548422 0.7878782018946632 1.1957469769750038 0.9216639516185051 1.1470236816326367 1.1630510502445262 1.0406760452497326 1.2780918661678493 0.9630624502547694 1.0 10.0689896490887 VAQNS(ph)PSVENIQTSQAEQAKPLQEDILMQNIETVHPFR ddPTM_A549_PD325901_60min_R1 1 VAQNSPSVENIQTSQAEQAKPLQEDILMQNIETVHPFR 38 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 VAQNS(0.765)PS(0.232)VENIQT(0.001)S(0.001)QAEQAKPLQEDILMQNIETVHPFR 40.621 0.016291999999999997 3204000.0 541.77 724.36 526.99 602.06 682.4 704.28 547.69 739.35 682.64 615.33 358.47 True False 596.7700915700055 785.4043593416412 562.7547104483066 639.247878822533 634.4705781521978 698.5445771832897 568.532642657468 724.6030842411453 653.9510147445457 576.4779587871254 314.38046252855526 1.8982416616166178 2.498260715773019 1.7900435221771818 2.0333575238139043 2.0181616028208773 2.2219719748641844 1.8084223112491542 2.304860417893588 2.080126129610065 1.8336952434974034 1.0 8.296367752508049 -10.602372803604537 0.7061218585722591 0.9308695638878213 2.085450226910453 0.2680093000439918 0.31522357363623454 0.2606747862063606 0.21167928968783867 0.1744956031267158 0.03830852706979437 2.498199956130454e-11 10.602372803604537 1.1545806630226316 VAQPTITDNKDGTVTVR ddPTM_A549_PD325901_60min_R1 1 VAQPTITDNKDGTVTVR 17 1 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5F3 Q60FE5 FLNA Filamin-A 0 101.05 7.105199999999999e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VAQRS(ph)PVDSGTILREPTTK ddPTM_A549_MK2206_60min_R1 4 VAQRSPVDSGTILREPTTK 19 2 P49454 P49454 CENPF Centromere protein F 1 VAQRS(0.993)PVDS(0.006)GT(0.002)ILREPTTK;VAQRS(1)PVDSGTILREPTTK;VAQRS(0.992)PVDS(0.006)GT(0.001)ILREPTTK;VAQRS(0.996)PVDS(0.003)GT(0.001)ILREPTTK 125.58 1.7866e-15 68570000.0 6621.4 7349.800000000001 6898.3 6733.5 8851.6 6530.7 6551.200000000001 6613.5 10560.4 10663.0 11267.300000000001 True False 7738.930442312512 7723.873426465993 7876.582668959709 8383.207802278297 7549.541365643622 7221.774339272193 7741.468239893655 7550.983877994316 8168.486261493508 8254.220894224874 8469.31844833969 0.9137607104417755 0.9119828795645495 0.9300137569515785 0.9898326356971174 0.8913989256270816 0.8526984058189401 0.914060356463663 0.8915692477562461 0.964479764377598 0.9746027315625398 1.0 13.048030160859138 -8.986036176956942 2.6295432550983624 0.9863343090339458 0.912586669070107 0.4658513199691273 0.03226716292506068 0.16554898840315202 2.2896820391609096 0.006514312793498609 0.0065886470280135095 1.0326753797804939e-09 8.986036176956942 -0.07374763996383882 VAQRS(ph)PVDSGTILREPTTK ddPTM_A549_PD325901_60min_R1 3 VAQRSPVDSGTILREPTTK 19 2 P49454 P49454 CENPF Centromere protein F 1 VAQRS(1)PVDSGTILREPTTK;VAQRS(0.999)PVDSGTILREPTTK;VAQRS(0.999)PVDS(0.001)GTILREPTTK 136.57 1.3687e-17 132250000.0 11429.3 11078.3 12442.199999999999 12008.599999999999 14957.7 14465.8 14007.1 14072.4 15025.5 14485.699999999999 14773.9 True False 12589.594122194034 12011.907220297233 13286.602513026653 12750.34394849062 13907.122753263682 14347.995320920703 14540.147855479232 13791.714942415767 14394.030487583757 13571.070429854974 12956.803959468356 0.9716589184784278 0.9270733166815704 1.0254536963428618 0.9840655140246324 1.0733451549292654 1.107371491133484 1.1222017328473837 1.0644380346850342 1.1109244635182682 1.047408795587876 1.0 13.661422273662188 -6.364127130215655 1.4955718513857328 1.0647450171733395 0.9569792700264449 0.5681539277934404 0.03985001073258006 0.3189203329669322 1.345490684257683 0.007641989900043333 0.02719424087613469 4.3238724059516523e-07 6.364127130215655 -0.10776574714689457 VARPPPIGAEVPDVT(ph)ATPAR ddPTM_A549_MK2206_60min_R1 1 VARPPPIGAEVPDVTATPAR 20 1 Q07820-2;Q07820 Q07820-2 MCL1 Induced myeloid leukemia cell differentiation protein Mcl-1 1 VARPPPIGAEVPDVT(0.574)AT(0.426)PAR 40.756 0.036241 3324900.0 1477.3 1660.0 1183.4 1184.4 1954.9 1471.4 1154.2 1631.1 2496.7 2545.7 2313.6 True False 1726.63212348269 1744.486909566729 1351.2239146524382 1474.5780531697367 1667.3367996403706 1627.1025713637275 1363.9031997932077 1862.3134200342524 1931.2014364106321 1970.6246019345656 1739.069267888377 0.9928483904377262 1.0031152535315229 0.7769810780988209 0.8479122024623019 0.958752380038832 0.9356168850820977 0.7842719234808251 1.0708678799755467 1.11047988258429 1.1331490000552704 1.0 10.7640996816245 -8.288825770974022 24.748534815579266 1.0550310477996958 0.9008027685835105 0.5387622211188349 0.07843659963568451 437.6326594179491 395478.61936459027 0.01327222002837233 0.016047302415367223 5.1424991552507276e-09 8.288825770974022 -0.15422827921618532 VARPPPIGAEVPDVT(ph)ATPAR ddPTM_A549_PD325901_60min_R1 1 VARPPPIGAEVPDVTATPAR 20 1 Q07820-2;Q07820 Q07820-2 MCL1 Induced myeloid leukemia cell differentiation protein Mcl-1 1 VARPPPIGAEVPDVT(0.89)AT(0.11)PAR 48.983999999999995 0.0062515 4878100.0 1474.6 1575.1 1316.0 1558.0 2197.3 1382.3 1678.9 1738.0 1935.9 1561.3 1677.7 True False 1624.3003064568547 1707.839204813931 1405.311673750871 1654.2341215252732 2042.969228273484 1371.043007100105 1742.791458229332 1703.3342265653764 1854.540855273593 1462.719251546875 1471.3535358165452 1.1039497081545597 1.1607266120892863 0.955114892200926 1.1242941150831136 1.3884964956024073 0.9318243193939302 1.1844817821178164 1.1576648202500772 1.2604318473631788 0.9941317405643924 1.0 10.522928222680964 -6.500711894833486 24.82655771348292 1.1381840165568027 1.0749591100314853 0.035102358945756085 0.1297246086983902 2127.3863626158623 2382639.1823233482 0.018964232444359033 0.04369351100689868 3.1570983057428466e-07 6.500711894833486 -0.06322490652531743 VARPPPIGAEVPDVTAT(ph)PAR ddPTM_A549_PD325901_60min_R1 1 VARPPPIGAEVPDVTATPAR 20 1 Q07820-2;Q07820 Q07820-2 MCL1 Induced myeloid leukemia cell differentiation protein Mcl-1 1 VARPPPIGAEVPDVT(0.038)AT(0.962)PAR 111.4 1.3133e-10 4791700.0 1394.2 1305.6 1130.8 1266.4 2082.8 1827.3 1375.6 1539.0 1671.6 1598.2 1792.8 True False 1535.7381576442065 1415.6274940035987 1207.5428880528007 1344.622651796923 1936.5113132699275 1812.419074639383 1427.9492107572037 1508.3034376778553 1601.348465145585 1497.2893792494826 1572.2969654955598 0.9767481533999968 0.9003563099528201 0.768011968828169 0.855196366402146 1.2316447565359092 1.152720582951797 0.9081930717249331 0.959299337706516 1.018477107243458 0.9522942625393696 1.0 10.618658015099305 VARPTSSEVDRFS(ph)PSGSVVPLTER ddPTM_A549_PD325901_60min_R1 1 VARPTSSEVDRFSPSGSVVPLTER 24 2 Q5TC79-2;Q5TC79 Q5TC79-2 ZBTB37 Zinc finger and BTB domain-containing protein 37 1 VARPT(0.004)S(0.004)S(0.004)EVDRFS(0.98)PS(0.006)GS(0.003)VVPLTER 68.234 4.1403e-05 9151300.0 1441.7 1717.0 1794.6 1395.8 1925.1 1743.8 2018.4 1806.7 2081.3 1974.3 2239.9 True False 1588.0603226765552 1861.6976158120247 1916.3923478064694 1482.0153959082008 1789.8876172344608 1729.5990709550476 2095.21131651086 1770.6639511712685 1993.8301989157153 1849.642361063855 1964.4064998959777 0.80841736308684 0.9477150558759646 0.9755579346270485 0.7544341743863496 0.9111594862515684 0.8804690226012977 1.0665874484847249 0.9013734943684168 1.0149784166471123 0.9415782126366412 1.0 10.939877785954954 -7.740927346791755 24.755664692221746 1.0017015387630694 0.8828238563847391 0.34870023172122555 0.06987590163353677 150.70425825922027 181882.21823078982 0.009716141654126535 0.014401475292565833 1.8158194061469825e-08 7.740927346791755 -0.1188776823783303 VAS(ph)DTEEADR ddPTM_A549_MK2206_60min_R1 2 VASDTEEADR 10 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VAS(0.945)DT(0.055)EEADR;VAS(0.995)DT(0.005)EEADR 132.17 1.0249e-06 128246000.0 1649.6100000000001 1847.44 1265.87 1555.71 1930.1799999999998 1565.6999999999998 1840.05 1793.9499999999998 2258.41 2159.86 1849.68 True False 1928.0238389076549 1941.466804945757 1445.389400744534 1936.8590198384752 1646.2530788939855 1731.3813347724536 2174.363267007009 2048.2479062414604 1746.883740939694 1671.9461259120824 1390.3534074290162 1.3867149378033865 1.3963836781152188 1.0395841755207318 1.3930695674131044 1.184053687427694 1.245281469820002 1.563892500560524 1.4731850875447527 1.2564314451316079 1.2025331955015492 1.0 10.44123592612915 -10.049449839232945 0.9079700441129609 1.0247917379560372 1.3245065672154115 0.22925084038472143 0.14701457478897126 0.37293362811545144 0.6187671805240375 0.05801288387782521 0.02779794427952011 8.923806831000563e-11 10.049449839232945 0.2997148292593743 VAS(ph)DTEEADR ddPTM_A549_PD325901_60min_R1 2 VASDTEEADR 10 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VAS(0.983)DT(0.017)EEADR;VAS(0.668)DT(0.332)EEADR 178.53 4.288800000000001e-11 151952000.0 1974.6399999999999 2012.1999999999998 1851.92 1462.8400000000001 2337.2200000000003 2119.58 2297.55 2167.08 2026.78 2699.17 2424.18 True False 2175.1039991468624 2181.775155816514 1977.6024276996297 1553.1963044493139 2173.0617301712796 2102.318843224508 2384.9845225176005 2123.855889358628 1941.6014849173068 2528.743945556765 2126.0212281431445 1.0230866796408173 1.026224539499102 0.9301894080459663 0.7305648146353962 1.0221260735337154 0.9888512943309893 1.1218065421673296 0.9989815065080945 0.9132559257713015 1.1894255391632926 1.0 11.053940286791661 -5.74290504928887 23.68987555529295 0.9613082654558561 1.0246557325034393 0.0 0.11349642095179358 308.76848851410244 394643.2005402254 0.012685826361621633 0.04890560268068991 1.807569275465337e-06 5.74290504928887 0.0633474670475832 VAS(ph)ET(ph)HSEGSEYEELPK ddPTM_A549_PD325901_60min_R1 1 VASETHSEGSEYEELPK 17 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 2 VAS(0.846)ET(0.625)HS(0.384)EGS(0.136)EY(0.009)EELPK 52.541000000000004 0.022588999999999998 4609000.0 2319.1 2319.4 2105.3 1949.4 2155.8 2190.7 2032.7 2445.9 2123.9 2164.4 2747.0 True False 2554.5333247688136 2514.8639779350087 2248.178318197347 2069.810010591378 2004.384045106257 2172.85966552427 2110.05551083612 2397.114605728569 2034.6398690612052 2027.739414621184 2409.1364146677292 1.0603522943806143 1.0438860840853885 0.9331884672489242 0.8591501909105669 0.8319927559530512 0.9019247114007669 0.8758555547080306 0.9950099094156866 0.8445515399931494 0.8416872545180685 1.0 11.23430037155213 -5.773163780291307 4.142349194911699 0.9137272817650874 1.0565239529771298 0.5121834906897738 0.05665550676165239 0.15038649029192036 5.805257713633116 0.009219253798391912 0.035107540326620446 1.685917115702338e-06 5.773163780291307 0.14279667121204231 VAS(ph)ETHS(ph)EGSEYEELPK ddPTM_A549_MK2206_60min_R1 1 VASETHSEGSEYEELPK 17 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 2 VAS(0.953)ET(0.054)HS(0.988)EGS(0.005)EYEELPK 98.175 4.4374e-07 2457900.0 840.78 836.87 830.62 600.69 906.07 1128.9 545.28 724.37 1053.0 1056.2 1110.5 True False 982.683108902576 879.4631084392216 948.4144059393338 747.8590769659993 772.7883032636717 1248.3594486968275 644.3503177813553 827.051665790087 814.4971812954681 817.6036864372422 834.732201759182 1.1772435600682354 1.0535871343956422 1.136190030695556 0.8959269516497635 0.9257918906627003 1.4955208940854732 0.7719245962039076 0.9907988023549248 0.9757586679643255 0.979480226968791 1.0 9.705169617107726 VAS(ph)ETHS(ph)EGSEYEELPK ddPTM_A549_PD325901_60min_R1 1 VASETHSEGSEYEELPK 17 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 2 VAS(0.782)ET(0.43)HS(0.51)EGS(0.271)EY(0.008)EELPK 48.146 0.008010699999999999 5053200.0 1453.6 1950.9 1581.3 1905.9 1763.7 1372.0 1518.7 2325.4 1747.9 1730.8 2160.7 True False 1601.168401916237 2115.309189684146 1688.6165271293712 2023.6231143870457 1639.8237964346893 1360.8268868851508 1576.4949595645285 2279.018072758992 1674.4418414859836 1621.5169926198246 1894.9475978058113 0.8449671134812669 1.1162890161888883 0.8911151575297629 1.0679045250276207 0.8653663026531532 0.7181343106589718 0.8319464672215612 1.202681317097054 0.8836349054849039 0.8557054530148506 1.0 10.88794223784421 VAS(ph)ETHSEGS(ph)EYEELPK ddPTM_A549_MK2206_60min_R1 1 VASETHSEGSEYEELPK 17 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 2 VAS(0.813)ET(0.173)HS(0.156)EGS(0.856)EY(0.002)EELPK 71.535 0.00034718 3264400.0 784.62 829.9 531.24 776.32 1243.6 939.48 674.04 979.69 1398.2 880.82 1090.2 True False 917.0446738827504 872.1383652104989 606.5778201960127 966.5184348503294 1060.6680873869584 1038.8951500236483 796.504343084919 1118.5640576747944 1081.5099324665946 681.8421502439418 819.4732520106803 1.1190660239765806 1.064267031377288 0.7402045383515545 1.1794386607236482 1.2943291129813894 1.267759682789632 0.9719711303945502 1.3649793387767781 1.3197623349059586 0.8320493055398167 1.0 9.678553049628656 -6.410283519469424 19.132423830151172 1.176657599036079 0.9795065322188748 0.15688638138395128 0.1793659145015915 4.8274208016964595 809.3317419386799 0.02348179869369554 0.05456688693184942 3.8879124842994556e-07 6.410283519469424 -0.19715106681720418 VAS(ph)ETHSEGSEYEELPK ddPTM_A549_MK2206_60min_R1 1 VASETHSEGSEYEELPK 17 0 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 VAS(0.968)ET(0.032)HSEGSEYEELPK 160.47 7.8821e-23 6718500.0 2176.7 2410.9 2310.2 1917.8 3678.4 2681.9 2480.4 2918.4 4443.0 3195.5 3950.5 True False 2544.073744794403 2533.604512213509 2637.8210982170526 2387.6610860933147 3137.312232747016 2965.6968778988617 2931.056573182354 3332.092137225162 3436.6675940130704 2473.634330628864 2969.4818217466445 0.8567399625628901 0.8532143533120694 0.888310236115704 0.8040665777468529 1.0565184167053274 0.9987253857491013 0.98705994820952 1.1221123203459218 1.1573290561488023 0.8330188494549787 1.0 11.535995485580774 -6.973692578835572 1.2931534058922285 1.0735872517412641 0.848427936267971 0.33092828638759186 0.09423938426438598 0.209947018900659 0.6950517795507013 0.011608572494556765 0.027987214180394328 1.0624473586704807e-07 6.973692578835572 -0.22515931547329315 VAS(ph)FRK ddPTM_A549_MK2206_60min_R1 3 VASFRK 6 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 VAS(1)FRK;VAS(1)FRK;VAS(1)FRK 57.559 0.030318 37792600.0 5003.4 5421.8 5751.0 4713.4 6812.6 5203.8 5356.299999999999 5413.4 7898.299999999999 6604.4 6929.3 True False 5847.851598614557 5697.746461619811 6566.5782771389 5868.183211592568 5810.475564596647 5754.462661997128 6329.470376929786 6180.766027842206 6109.347660993347 5112.461453044995 5208.563571048982 1.1227378755860753 1.093918963241589 1.2607272979518267 1.126641372721259 1.1155619942690729 1.1048079923575174 1.2152045934720266 1.1866546205170778 1.1729429002174876 0.9815492089722863 1.0 12.34666984245308 -10.679861265310535 0.8925271056863573 0.9977707040129149 1.1561566193739488 0.6179985525344309 0.049420193967108256 0.3444074861621829 0.47770872243697277 0.03585333375139677 0.008970800469298932 2.089963659833204e-11 10.679861265310535 0.15838591536103386 VAS(ph)FRK ddPTM_A549_PD325901_60min_R1 3 VASFRK 6 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 VAS(1)FRK;VAS(1)FRK;VAS(1)FRK 66.682 0.023296 99347000.0 10386.5 10116.6 9643.2 9479.3 11209.0 10575.2 10967.5 11288.7 10439.7 10664.800000000001 10542.5 True False 11440.929833862832 10969.161386210782 10297.645541272339 10064.814831947704 10421.71850895074 10489.079077396385 11384.874214146288 11063.538022686167 10000.955714034682 9991.422707933853 9245.83933441374 1.2374138701803732 1.1863889247331718 1.1137599485363858 1.088577734039318 1.12717927837663 1.1344647790228422 1.2313510761290098 1.1965963956897683 1.0816709389282095 1.0806398799019785 1.0 13.174588577642771 -9.254527551050092 1.3910349630192735 1.0231511002522988 1.1599033120242517 0.45953124768996034 0.05097924193695373 0.19603157110623112 0.7858840593333895 0.011984671911674964 0.010488894268578412 5.565093289449704e-10 9.254527551050092 0.13675221177195285 VAS(ph)FSIPGSSSR ddPTM_A549_MK2206_60min_R1 2 VASFSIPGSSSR 12 0 Q14573 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 1 VAS(0.933)FS(0.055)IPGS(0.004)S(0.004)S(0.004)R;VAS(0.714)FS(0.126)IPGS(0.066)S(0.066)S(0.027)R 52.79 0.024088 10763800.0 2891.7 3307.0 3161.5 3111.1 4293.5 3635.1 2956.9 3325.6000000000004 5805.6 4851.9 5074.5 True False 3379.7482647227316 3475.312174660949 3609.848239119217 3873.3196396625863 3661.9318375650587 4019.7638692159076 3494.1304552664496 3797.013984222861 4490.640869638148 3755.8524202091044 3814.3616009247803 0.8860586956158855 0.9111124057609982 0.9463833314188199 1.0154568561941038 0.9600379357524034 1.0538497105888776 0.9160459392259267 0.995452026179764 1.1772981535230969 0.984660819597835 1.0 11.89722590207589 -6.888774676350453 0.5386570338829045 1.075412761243872 0.890463668826207 0.21900378295525347 0.06797901829964054 0.9776964059513056 0.4634502182447924 0.018131215968983507 0.08390628401272897 1.291889366692318e-07 6.888774676350453 -0.184949092417665 VAS(ph)FSIPGSSSR ddPTM_A549_PD325901_60min_R1 2 VASFSIPGSSSR 12 0 Q14573 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 1 VAS(0.985)FS(0.015)IPGSSSR;VAS(0.499)FS(0.499)IPGS(0.001)SSR 146.5 6.661000000000001e-12 22995000.0 5248.9 4725.4 4650.0 4680.1 6381.299999999999 6489.0 5786.6 5612.299999999999 6632.2 6157.1 6254.0 True False 5781.764463964051 5123.626041792743 4965.576962721543 4969.179147721714 5933.099502289893 6436.155735421091 6006.812229549023 5500.358273735825 6353.471698096765 5768.339655222743 5484.797647372402 1.0541436230986418 0.934150422896151 0.9053345778582002 0.9059913359068579 1.081735349914369 1.1734536347944313 1.0951748114949513 1.0028370465719691 1.158378504837005 1.0516959833488437 1.0 12.421222680401316 -6.771595370725006 24.97562162178995 1.0804208010272807 0.9455960638713835 0.4997136784344476 0.06278888454832925 146.5099228406873 360297.7053906425 0.010766533004001799 0.020512026159117402 1.6920166381191433e-07 6.771595370725006 -0.13482473715589716 VAS(ph)GVLSPPPAAPPPSSSSVPEAGGPPIK ddPTM_A549_PD325901_60min_R1 1 VASGVLSPPPAAPPPSSSSVPEAGGPPIK 29 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VAS(0.558)GVLS(0.442)PPPAAPPPSSSSVPEAGGPPIK 56.383 0.0012445 2251800.0 1227.9 1105.7 1318.7 932.96 1299.3 1257.4 952.09 1525.8 1297.5 1327.1 1326.9 True False 1352.5555040677955 1198.8812194544873 1408.1949119872904 990.586820294107 1208.0416503416634 1247.160151289641 988.3223059536389 1495.366722033055 1242.9705871777924 1243.3066795156967 1163.6997119121256 1.162289111376811 1.0302324621912584 1.2101016246480152 0.8512392072920864 1.0381042789438157 1.0717199106635318 0.8492932462187204 1.2850108208551096 1.0681197000001086 1.068408513630003 1.0 10.184503109208721 -11.685594542456151 0.0069189340682841325 3.1179151995075934e-06 2.0436341690029436 0.004242132104567142 0.12650274589198446 36507.54297961238 40.33632675833694 6253.815419970274 5670.993451160107 2.0625546166919726e-12 11.685594542456151 2.0436310510877442 VAS(ph)LLGK ddPTM_A549_MK2206_60min_R1 2 VASLLGK 7 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4;D6RB25;D6RBW6;D6RB27;D6R9G4;D6RBY4;D6REL2;D6R9G6;D6RF74;D6RE17 Q9P0K7 RAI14 Ankycorbin 1 VAS(1)LLGK;VAS(1)LLGK 69.825 0.021726 2610300.0 1221.96 1065.6599999999999 1459.48 1467.7 1949.2 1303.07 1441.17 1300.22 1930.22 2069.27 2192.6000000000004 True False 1428.1969739463268 1119.8975421981208 1666.456210036285 1827.2865658875562 1662.4752620896259 1440.9600024921394 1703.0119341933605 1484.5301667567498 1493.0282519279558 1601.820469829571 1648.1169073184888 0.866562904369463 0.6795012764113992 1.011127428300966 1.1087117411231338 1.0087119758964784 0.8743069111745254 1.0333077263094077 0.9007432422813397 0.9058994815829755 0.9719094942334869 1.0 10.68660286676245 -5.770542818985513 24.9965427642065 0.967378328429632 0.7730320779767886 0.5189187240787634 0.07592294608342111 104.19619907858068 286108.72152502555 0.010659949917635764 0.03383103096871333 1.6961223659206228e-06 5.770542818985513 -0.19434625045284337 VAS(ph)LLGK ddPTM_A549_PD325901_60min_R1 2 VASLLGK 7 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4;D6RB25;D6RBW6;D6RB27;D6R9G4;D6RBY4;D6REL2;D6R9G6;D6RF74;D6RE17 Q9P0K7 RAI14 Ankycorbin 1 VAS(1)LLGK;VAS(1)LLGK 60.91 0.028428 3704700.0 2201.71 1807.1599999999999 2171.3199999999997 2342.86 2729.4 2603.2 2635.0 2408.13 2581.9 2641.1 2555.8 True False 2425.2259783867635 1959.4557154285708 2318.6788324078584 2487.573141178885 2537.696359918829 2582.00040228821 2735.2763669273277 2360.0979580085614 2473.391721799109 2474.3404952670544 2241.4528025510667 1.0819884209145687 0.8741900401375633 1.0344535605518432 1.1098039353528664 1.132165868953653 1.151931639760407 1.2203140587275472 1.0529322568480857 1.1034770480038951 1.103900333056726 1.0 11.130218406070584 -5.994047561067304 24.94291565821647 1.078717786289521 0.9721473519950715 0.2728625484381576 0.07323814169582402 176.91417961484012 741315.9549415016 0.011161753297382162 0.0345597872202199 1.013800354928676e-06 5.994047561067304 -0.10657043429444946 VAS(ph)LTLHNK ddPTM_A549_PD325901_60min_R1 1 VASLTLHNK 9 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 VAS(0.998)LT(0.002)LHNK 88.681 0.0011117000000000002 2305400.0 2415.8 2373.4 2449.2 2576.0 3114.1 2751.3 2868.3 3138.4 2631.1 2847.6 3123.8 True False 2661.0502375820356 2573.414747448025 2615.417440236044 2735.113669479529 2895.3763590617823 2728.8943249906083 2977.4547260939853 3075.802149972828 2520.5240168967157 2667.802050025544 2739.59240339973 0.9713307111962253 0.9393421971292208 0.9546739277676528 0.998365182384561 1.0568639172267855 0.9960950109235791 1.0868239824285821 1.1227225430162073 0.9200361388682643 0.9737952429401188 1.0 11.419745549623128 -6.254397880397993 20.61521389393556 0.9929601395838725 0.9535382258014701 0.08682162251273762 0.057228084442899355 124.7161086302635 365105.58993932663 0.009617581087946667 0.024715772649325837 5.56675515034788e-07 6.254397880397993 -0.03942191378240245 VAS(ph)PTSGVK ddPTM_A549_MK2206_60min_R1 2 VASPTSGVK 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.925)PT(0.075)SGVK;VAS(0.834)PT(0.164)S(0.002)GVK 146.71 2.9583e-05 565510000.0 19988.2 19493.4 17874.6 17550.300000000003 23345.0 17071.9 18091.8 19659.3 26142.0 26050.0 26315.0 True False 23361.719495428606 20485.530796956675 20409.487058345836 21850.124287862913 19910.98142493451 18878.437126589946 21378.845875947634 22446.06597908122 20220.87874019575 20165.286907489262 19780.259242947195 1.1810623515340632 1.0356553240959645 1.0318108983138325 1.104642968501727 1.0066087193490107 0.9544079728541071 1.0808172740997026 1.1347710716726092 1.0222757190306118 1.0194652486508413 1.0 14.271773713940881 -2.5626566091923255 1.2323083588712131 1.0255967771766896 157.32136779008806 0.3707074479518876 0.0501800737202273 1123.9087512598712 2.1951391202470076 0.0075417803430811 496108.2257817146 0.002737432321762627 2.5626566091923255 156.29577101291136 VAS(ph)PTSGVK ddPTM_A549_PD325901_60min_R1 1 VASPTSGVK 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.959)PT(0.041)SGVK 139.43 4.2046000000000004e-05 425470000.0 5621.8 5278.8 5804.4 5687.6 6752.9 6269.8 5961.7 5967.0 6240.3 6552.9 7187.8 True False 6192.520997449576 5723.6630019502145 6198.321488692673 6038.9101345231975 6278.599600240298 6218.740827545568 6188.575755867415 5847.983503979055 5978.041892227804 6139.148775675089 6303.746167218317 0.9823557029711711 0.9079780261006165 0.9832758687090083 0.9579875163641012 0.9960108534971173 0.9865151074586718 0.9817298463015803 0.9276997120205462 0.9483316322785507 0.9738889563162946 1.0 12.621993727662563 -7.997260550821911 0.003815220609387407 1.9334546427271164 3.6461589645206904e-08 0.04253857975145614 0.02724417062226533 15559.21288025977 34.096359965345115 8592.059353924618 8685.802355702725 1.0063277510003393e-08 7.997260550821911 -1.9334546062655267 VAS(ph)PTSGVKR ddPTM_A549_MK2206_60min_R1 4 VASPTSGVKR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.99)PT(0.009)SGVKR;VAS(1)PTSGVKR;VAS(0.944)PT(0.055)S(0.001)GVKR;VAS(0.333)PT(0.333)S(0.333)GVKR 140.78 2.2050999999999997e-08 123733100.0 15108.3 17548.3 17310.1 15804.299999999997 22726.0 15294.4 15514.499999999998 12890.9 27484.0 28239.4 28266.7 True False 17658.211677528958 18441.43351515051 19764.932470022948 19676.354209481993 19383.035504950152 16912.84325639894 18333.283827059182 14718.22455172555 21258.917882929378 21860.09992688493 21247.29826876747 0.8310803309748656 0.8679425158848808 0.9302327392408507 0.9260638204719566 0.9122588321472525 0.7959997098200492 0.862852471648513 0.6927104032497463 1.0005468749021604 1.0288413919909172 1.0 14.374991784467833 -8.903457202979103 24.998480015053353 1.0002883626849728 0.8576863117692374 0.5401682301482971 0.06438144977835374 8.311340512828977 2145.3775249194077 0.011081189483667144 0.01179680097298827 1.248943514144241e-09 8.903457202979103 -0.1426020509157354 VAS(ph)RYFK ddPTM_A549_PD325901_60min_R1 1 VASRYFK 7 1 P68400;A0A2R8Y4D6;Q8NEV1;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8YDP2;A0A2R8Y4H0;P68400-2;A0A2R8YF43;H3BSA1;P19784 P68400 CSNK2A1;CSNK2A3;CSNK2A2 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3;Casein kinase II subunit alpha 1 VAS(0.997)RY(0.003)FK 41.448 0.029800999999999998 3888300.0 1331.9 1368.4 1102.4 1547.1 1287.0 2120.0 1772.2 1872.1 1906.0 1553.5 1718.8 True False 1467.113507507043 1483.7198704002183 1177.2154932697272 1642.6608532809687 1196.6055599089664 2102.7354228837607 1839.6420407850505 1834.7594968659603 1825.897448293542 1455.4117448780312 1507.3984963709113 0.9732751565290433 0.9842917277496961 0.7809583836682168 1.0897323151347862 0.7938216488803826 1.3949432933269694 1.2204085682810628 1.2171695150838855 1.2112904800485225 0.9655122705654549 1.0 10.55784514336285 -7.23920141275877 24.994746726057965 1.1403827436591416 0.9289566848269729 0.4361197571839416 0.13600008673695155 707.1488043415003 794812.633245764 0.020548790598993404 0.035573602904998024 5.764990384169987e-08 7.23920141275877 -0.2114260588321687 VAS(ph)SPVMVSNPATR ddPTM_A549_MK2206_60min_R1 2 VASSPVMVSNPATR 14 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 VAS(0.5)S(0.5)PVMVSNPATR;VAS(0.5)S(0.5)PVMVSNPATR 232.22 1.4293e-47 26529000.0 17819.9 20974.6 18527.0 17767.8 24873.0 20165.1 17858.8 18523.1 28252.0 29261.0 34341.0 True False 20827.463465273933 22042.117550239935 21154.40718841112 22120.91179762686 21214.21464906385 22298.957497489955 21103.512791948466 21148.80614961465 21852.967109173376 22650.9197773529 25813.181936615987 0.8068537817776811 0.8539093554744291 0.8195195478169084 0.8569618364734941 0.8218364826604928 0.8638593084821865 0.817547904158733 0.8193025641528943 0.8465816869393754 0.8774942908228831 1.0 14.655820369924768 -10.49367916018273 0.6293423638410895 1.0125888834162435 0.8319605132069015 0.3990581423942223 0.039802246828447296 0.17732579732806283 0.11489404209560057 0.01712946585103997 0.0038632043756641255 3.208638866330092e-11 10.49367916018273 -0.18062837020934208 VAS(ph)SPVMVSNPATR ddPTM_A549_PD325901_60min_R1 1 VASSPVMVSNPATR 14 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 VAS(0.984)S(0.016)PVMVSNPATR 214.72 1.8536e-38 18344000.0 7468.8 8071.6 7445.5 8368.5 9769.3 9252.4 8270.4 8280.3 8725.2 9593.1 13127.0 True False 8227.027077760038 8751.82205928266 7950.796403428655 8885.40323875754 9083.13807025538 9177.051522023448 8585.134597736534 8115.142920730312 8358.510186700329 8987.390028831316 11512.46221890909 0.7146192466323354 0.760204193756909 0.6906251896635597 0.7718073744609877 0.7889830948010781 0.7971406418125085 0.7457253222195638 0.704900721185541 0.7260401839123146 0.7806661909447684 1.0 13.490908801300854 -10.681298759897174 0.7944113112592975 1.0119835706828042 0.7446297738460087 0.200083101935564 0.07151313015294539 0.1859407977779472 0.1941784757721318 0.031138899068508957 0.006927413210722377 2.0830574130634627e-11 10.681298759897174 -0.2673537968367955 VASAGSAISNASGERLS(ph)QLLK ddPTM_A549_MK2206_60min_R1 2 VASAGSAISNASGERLSQLLK 21 1 Q86YT6 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 1 VASAGS(0.008)AIS(0.033)NAS(0.094)GERLS(0.865)QLLK;VAS(0.087)AGS(0.067)AIS(0.147)NAS(0.147)GERLS(0.552)QLLK 55.588 0.0018745 5060900.0 1874.82 2581.7 1929.71 2274.8999999999996 2866.2 1811.3700000000001 1780.63 1697.24 2714.6000000000004 2577.2 2917.8999999999996 True False 2191.2437810517936 2713.0975026677265 2203.3718948318024 2832.250602124142 2444.585776832182 2003.0479711099076 2104.147422151949 1937.8289675795063 2099.7474343254303 1995.0087300568637 2193.3049000568367 0.9990602679066692 1.2369905810165382 1.0045898747477857 1.2913164066020861 1.1145672344820066 0.9132555948140184 0.9593501670002299 0.883520101345367 0.9573440675170233 0.9095902398271967 1.0 11.098890665403172 -7.182305789757347 6.147562524148809 0.9655967937077777 1.1389485443493448 0.5305113454776117 0.0877251914389641 0.14584616817025942 9.147418227956324 0.011652458926091276 0.02029058925202132 6.571949388941928e-08 7.182305789757347 0.17335175064156705 VASAGSAISNASGERLS(ph)QLLK ddPTM_A549_PD325901_60min_R1 2 VASAGSAISNASGERLSQLLK 21 1 Q86YT6 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 1 VASAGSAISNAS(0.001)GERLS(0.999)QLLK;VASAGSAIS(0.002)NAS(0.01)GERLS(0.988)QLLK 125.82 4.6503e-16 9251800.0 5151.4 5056.2 5003.0 5022.2 5872.700000000001 5057.8 5435.700000000001 6255.6 5858.8 5621.1 5590.700000000001 True False 5674.366335739756 5482.303718735441 5342.533665482987 5332.409887756243 5460.221811715147 5016.610953708244 5642.55853802917 6130.827150576737 5612.575010525817 5266.182786697071 4903.079342367268 1.1573066514971184 1.11813481608652 1.0896282300223894 1.087563450519585 1.1136311347307066 1.0231551650327082 1.1508193410765557 1.2504034143605551 1.1447040968780235 1.0740562040659314 1.0 12.259472392382692 -10.699457462714136 1.0518192080640067 1.0026991987748597 1.1245961014150352 0.23569008250062207 0.056996050825969376 0.40680960379673975 0.826480168304979 0.03474686739385071 0.009948334933883354 1.9977564305530456e-11 10.699457462714136 0.1218969026401755 VASEAPLEHKPQVEAS(ph)SPR ddPTM_A549_MK2206_60min_R1 1 VASEAPLEHKPQVEASSPR 19 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 VASEAPLEHKPQVEAS(0.628)S(0.372)PR 159.2 3.8827e-27 19943000.0 5997.8 6722.0 6489.3 6940.7 8346.9 6676.0 5830.9 7391.7 12831.0 12333.0 13645.0 True False 7010.082007868729 7064.1210880166 7409.580318872794 8641.17181157986 7119.082067071568 7382.449888829855 6890.299053607879 8439.496111131859 9924.79898689663 9546.966734359508 10256.569917158067 0.6834723562057199 0.68874108450225 0.7224228351895124 0.8425011364787919 0.6940996965430088 0.7197776594375729 0.6717936999660283 0.8228380617786798 0.9676528378452895 0.9308147666783343 1.0 13.324260713722248 -8.632391541678857 2.702417500371103 0.9865801354563274 0.7208084958456997 0.8411193218393779 0.04705959717025545 0.062234482340293565 0.9098764529573777 0.007961143388756637 0.009010971667215253 2.3313552624607015e-09 8.632391541678857 -0.26577163961062766 VASEAPLEHKPQVEAS(ph)SPR ddPTM_A549_PD325901_60min_R1 3 VASEAPLEHKPQVEASSPR 19 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 VASEAPLEHKPQVEAS(0.784)S(0.216)PR;VASEAPLEHKPQVEAS(0.808)S(0.192)PR;VASEAPLEHKPQVEAS(0.5)S(0.5)PR 239.87 1.8383999999999998e-85 369916000.0 21254.8 22028.1 22586.3 22548.0 27716.4 26761.6 24660.2 27945.6 27387.6 30318.7 31044.1 True False 23412.571649043242 23884.485294623664 24119.14214045539 23940.738749776563 25769.6956803892 26543.662402380196 25598.657405579223 27388.203085100904 26236.59441494451 28404.372107778272 27225.872504763905 0.8599383415516464 0.8772716206044242 0.8858905122778009 0.8793377970012708 0.9465149620413484 0.9749425807285207 0.9402327657671959 1.0059623646701714 0.9636640445720778 1.0432860178423358 1.0 14.732690663133548 -6.887557246367267 1.0134100237754458 0.9830265483080396 0.8659247099244557 0.8089992015477594 0.025439132534009458 0.13733560184748247 0.27283014132612243 0.0031362239859360087 0.009266482820783621 1.2955159183077785e-07 6.887557246367267 -0.1171018383835839 VASEAPLEHKPQVEASS(ph)PR ddPTM_A549_PD325901_60min_R1 1 VASEAPLEHKPQVEASSPR 19 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 VASEAPLEHKPQVEAS(0.102)S(0.898)PR 223.89 3.0735999999999993e-75 41198000.0 7864.5 8568.1 8304.9 7282.3 10654.0 9771.6 9141.3 10131.0 9804.1 11459.0 11920.0 True False 8662.898250461101 9290.16385674957 8868.520455420678 7732.111131696724 9905.699794304686 9692.023329363654 9489.177173811297 9928.929257384249 9392.06777167614 10735.47678439483 10453.91556710569 0.8286749777968164 0.8886779118421443 0.8483443737891264 0.7396378019377351 0.9475588099710676 0.9271189600823438 0.9077151152502091 0.9497808924941612 0.8984258301482019 1.026933565273389 1.0 13.351755791825799 -14.999999988670325 0.04597657400812202 1.537507634925289 0.5941126402017168 0.5670259218045683 0.0505386421073432 271.5373615066768 0.955639161614372 18.87415742563764 4.963786401033517 1.000000026087541e-15 14.999999988670325 -0.9433949947235721 VASETSPLPLKIDGAEEDPKS(ph)GSPDLSEDQYFVK ddPTM_A549_PD325901_60min_R1 1 VASETSPLPLKIDGAEEDPKSGSPDLSEDQYFVK 34 2 Q9H706-2;Q9H706-3;Q9H706 Q9H706-2 GAREM GRB2-associated and regulator of MAPK protein 1 VASETSPLPLKIDGAEEDPKS(0.543)GS(0.456)PDLS(0.001)EDQYFVK 80.43 2.1156e-06 3004100.0 688.91 1090.8 1052.7 985.08 1129.1 1223.9 760.25 1198.4 1197.2 877.88 769.61 True False 758.8476360512628 1182.7255441629325 1124.1425523993476 1045.9261543209986 1049.795911183539 1213.9329641827524 789.181729774763 1174.4969718733869 1146.885847375146 822.4505069800615 674.9528489597491 1.1242972560539808 1.7523083960394759 1.665512715639172 1.5496284754305447 1.5553618490558347 1.7985448406561886 1.1692397935516026 1.740117066967782 1.6992088397622882 1.21853031400288 1.0 9.398642911274598 -10.801899003799463 0.968756098826276 0.9882207341882117 1.577024109407585 0.3679703192563346 0.22204990605493102 0.3641446397286988 0.5869714878395674 0.15261078758653498 0.035191416349955124 1.5779781895632715e-11 10.801899003799463 0.5888033752193733 VASGPSPGEGIS(ph)PQSAQAPQAPGDNHVVPVLR ddPTM_A549_MK2206_60min_R1 2 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 32 0 Q14764 Q14764 MVP Major vault protein 1 VASGPSPGEGIS(0.985)PQS(0.015)AQAPQAPGDNHVVPVLR;VASGPSPGEGIS(0.995)PQS(0.005)AQAPQAPGDNHVVPVLR 130.26 3.503e-30 48708000.0 3797.4 3633.2 3621.4 3393.6000000000004 4644.0 3862.0 3983.8 4085.6000000000004 6080.7 5530.7 6410.7 True False 4438.308282483698 3818.114361348094 4134.9689745836895 4225.032152344495 3960.8737518695993 4270.67427661188 4707.604892857545 4664.746311625247 4703.431158882575 4281.311028762031 4818.746263680853 0.9210504225830407 0.7923460071192013 0.8581005822508586 0.876790750363593 0.8219718439468198 0.8862625344688054 0.9769356250066564 0.9680414897094058 0.9760694798007078 0.8884699036823126 1.0 12.234442121065387 -7.69854117152557 3.0921929906153824 0.9864543077162364 0.8519308558547343 0.5673655610314761 0.042845899640910554 0.07349057477801241 1.4308335679024593 0.004538345585310942 0.006808645305052761 2.0019758234006734e-08 7.69854117152557 -0.13452345186150216 VASGPSPGEGIS(ph)PQSAQAPQAPGDNHVVPVLR ddPTM_A549_PD325901_60min_R1 4 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 32 0 Q14764 Q14764 MVP Major vault protein 1 VASGPS(0.002)PGEGIS(0.988)PQS(0.01)AQAPQAPGDNHVVPVLR;VASGPS(0.001)PGEGIS(0.956)PQS(0.043)AQAPQAPGDNHVVPVLR;VASGPSPGEGIS(0.996)PQS(0.004)AQAPQAPGDNHVVPVLR;VASGPSPGEGIS(0.951)PQS(0.049)AQAPQAPGDNHVVPVLR 173.48 5.3261e-63 80728700.0 4630.0599999999995 4381.3 4608.139999999999 5262.85 6028.8 5461.74 5710.35 5421.83 5854.73 5902.09 6483.4 True False 5100.100282729976 4750.52752717369 4920.876091396912 5587.924291700438 5605.357886230908 5417.261400274122 5927.660494073416 5313.687347306648 5608.676058472012 5529.431030143018 5685.982901658814 0.8969601862928723 0.8354804453927893 0.8654398327440113 0.9827543255661623 0.9858203908062431 0.9527396571477034 1.042504101154454 0.9345239757503399 0.986403961368887 0.9724670520078201 1.0 12.47319404535021 -6.265895066705536 5.527248472530012 0.9888587909021659 0.8620781396877216 0.7544419608590647 0.02934154792527386 0.04949413706871922 5.68437970847664 0.0037167739743913498 0.009345483793770596 5.421318633078779e-07 6.265895066705536 -0.12678065121444426 VASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIK ddPTM_A549_MK2206_60min_R1 1 VASGVLSPPPAAPPPSSSSVPEAGGPPIK 29 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VAS(0.143)GVLS(0.855)PPPAAPPPSSSSVPEAGGPPIK 54.071999999999996 0.001848 2438400.0 1791.3 1702.3 1786.6 1579.4 2881.8 2354.8 2062.9 1934.1 3144.6 2228.2 2773.0 True False 2093.627646919748 1788.9397988888202 2039.9667449028614 1966.3530709019612 2457.8910374973766 2603.9833730102664 2437.7022273898883 2208.2645979328336 2432.3531208943277 1724.848072447891 2084.3875690933905 1.00443299411461 0.858256797063381 0.9786887885683131 0.9433720964653571 1.17919098825102 1.2492798420127191 1.1695052606987926 1.0594308998365998 1.166938988199918 0.8275083281167896 1.0 11.025407840600224 -6.743796879829266 24.711245158324612 1.1049103568067071 0.9422283171464468 0.2829294012422249 0.1114605453606862 163.15927929363178 228530.08906561192 0.013021573873987311 0.027057807277800775 1.8038612121514293e-07 6.743796879829266 -0.1626820396602603 VASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIKK ddPTM_A549_MK2206_60min_R1 2 VASGVLSPPPAAPPPSSSSVPEAGGPPIKK 30 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VAS(0.216)GVLS(0.781)PPPAAPPPS(0.001)S(0.001)S(0.001)S(0.001)VPEAGGPPIKK;VAS(0.034)GVLS(0.951)PPPAAPPPS(0.004)S(0.004)S(0.004)S(0.004)VPEAGGPPIKK 60.48 0.00048962 65074000.0 2501.6000000000004 2992.2 2644.9 2997.1 3046.3 2443.2 2434.6 1860.0700000000002 3373.3 3213.9 4107.3 True False 2923.808921752044 3144.490199280461 3019.9865910632348 3731.3896345449325 2598.1933054092083 2701.7378023350975 2876.935306027155 2123.7406187254687 2609.2529360531835 2487.877757849509 3087.3440542867975 0.9470304800309886 1.018509807779381 0.9781827156160207 1.2086082953287547 0.8415626051789077 0.8751009783259228 0.9318479752953065 0.6878859567908024 0.8451448527190284 0.8058310684211157 1.0 11.592150550820437 -6.810909506571869 24.999899309648498 0.8983968113774086 1.0324087797755608 0.39011475454262423 0.10108667664379727 114.38856247618521 57806.28646632796 0.015635789888802317 0.02954890061908105 1.5455764559283816e-07 6.810909506571869 0.13401196839815221 VASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIKK ddPTM_A549_PD325901_60min_R1 3 VASGVLSPPPAAPPPSSSSVPEAGGPPIKK 30 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VAS(0.005)GVLS(0.995)PPPAAPPPSSSSVPEAGGPPIKK;VAS(0.056)GVLS(0.943)PPPAAPPPSSSSVPEAGGPPIKK;VAS(0.072)GVLS(0.928)PPPAAPPPSSSSVPEAGGPPIKK 104.13 1.008e-14 125746800.0 11331.0 12219.2 10393.0 11495.4 13979.0 11832.6 12350.900000000001 13673.2 13740.400000000001 12421.6 12938.6 True False 12481.314778558673 13248.954867286126 11098.331478186024 12205.444750052397 12997.163264931978 11736.23922868603 12820.920258171807 13400.4772995821 13162.938771528128 11637.29805611648 11347.234224543092 1.099943345803391 1.1675933187868612 0.9780648974515118 1.0756316921398406 1.1454036294430436 1.03428192248835 1.129871826426325 1.1809465667499857 1.160012960960815 1.0255625138102822 1.0 13.470053077349466 -10.958736384097422 1.2606075120950324 1.00080686755968 1.1117009754983063 0.2797833285540122 0.05837177215422882 0.437582886915391 1.250829876661743 0.04086767462145778 0.009791281660773627 1.0996731363347741e-11 10.958736384097422 0.11089410793862631 VASLT(ph)LHNK ddPTM_A549_MK2206_60min_R1 2 VASLTLHNK 9 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 VAS(0.418)LT(0.582)LHNK;VAS(0.415)LT(0.585)LHNK 91.54899999999999 0.00091722 20654200.0 2343.2 2841.9 2676.2 2838.3999999999996 3945.8 3163.0 3421.3 3497.1000000000004 4828.700000000001 4410.1 4669.5 True False 2738.674874260231 2986.540571263668 3055.7254017178097 3533.808127420619 3365.3780469696526 3497.7065605705275 4042.905923975481 3992.8246344195854 3735.0071598494096 3413.855347052528 3509.934278356147 0.7802638616763132 0.8508821916353355 0.8705933386162824 1.0068017937577034 0.9588151173433948 0.9965162544891449 1.1518466168742474 1.1375781760476713 1.0641245287358128 0.9726265725554791 1.0 11.777228301751082 -6.107427070062427 0.9275706867098441 1.046319688922937 0.7710367762966551 0.7310246994366121 0.05678273314152069 0.34794358372959183 0.44250549695696156 0.009460436872308405 0.07140135730745698 7.808595568336182e-07 6.107427070062427 -0.2752829126262818 VASLT(ph)LHNK ddPTM_A549_PD325901_60min_R1 2 VASLTLHNK 9 0 Q9P0K7;Q9P0K7-3;Q9P0K7-2;Q9P0K7-4 Q9P0K7 RAI14 Ankycorbin 1 VAS(0.333)LT(0.667)LHNK;VAS(0.041)LT(0.959)LHNK 100.48 0.00068855 46748000.0 4473.4 4825.1 4008.4 4525.1 5219.1 4093.3 4393.6 4690.6 4531.7 5094.5 5593.1 True False 4927.536274856974 5231.728110689925 4280.43412846732 4804.605149752258 4852.528420917551 4059.9655219292913 4560.800852270171 4597.042303295487 4341.248408411256 4772.832400567193 4905.184157582117 1.0045568354941998 1.066571191339077 0.8726347453950126 0.9794953655971528 0.9892652885247591 0.8276887047459082 0.9297919722790385 0.9371803699132631 0.8850327059995972 0.9730179840831575 1.0 12.260091585886023 -5.749348282362784 24.984419543480183 0.9367029941332136 1.035564033994807 0.3598937458085548 0.052698841132952055 204.5318797908093 422626.11765784264 0.00785732964105394 0.029973551844045876 1.780949962185146e-06 5.749348282362784 0.09886103986159334 VASPS(ph)PSGSVLFTDEGVPK ddPTM_A549_MK2206_60min_R1 2 VASPSPSGSVLFTDEGVPK 19 0 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 VAS(0.406)PS(0.578)PS(0.008)GS(0.008)VLFTDEGVPK;VAS(0.399)PS(0.587)PS(0.011)GS(0.002)VLFTDEGVPK 78.069 0.00034969 1983550.0 1853.0900000000001 1805.1599999999999 1571.63 1572.12 2311.5 1828.83 1867.22 1600.19 2912.3 2975.8 2720.9 True False 2165.846288299288 1897.0349335382382 1794.510766423197 1957.2894705751482 1971.4814120255353 2022.3555767208966 2206.469704312835 1827.0218328763463 2252.668699987456 2303.564713217141 2045.2254369802415 1.0589767998862474 0.9275431936438238 0.877414652671628 0.9570042671995465 0.9639433269206799 0.9888179269405567 1.0788393613814373 0.8933107323239285 1.1014280671736132 1.1263133498957139 1.0 10.998044159070185 -7.462092776991107 1.3694055259160747 1.0387610949127732 0.9472738057063886 0.23225257152207412 0.07029915835909002 0.4367719731236677 1.627014379712152 0.011214968762490875 0.020529624415001557 3.450700152180133e-08 7.462092776991107 -0.0914872892063846 VASPS(ph)PSGSVLFTDEGVPK ddPTM_A549_PD325901_60min_R1 2 VASPSPSGSVLFTDEGVPK 19 0 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 VAS(0.431)PS(0.556)PS(0.007)GS(0.007)VLFTDEGVPK;VAS(0.395)PS(0.467)PS(0.065)GS(0.065)VLFT(0.008)DEGVPK 120.66 3.5891e-14 4679700.0 3421.6000000000004 2745.0 2749.1 3867.8 4692.4 3327.4 3810.1 3905.5 4163.1 3962.5 4252.6 True False 3768.9583131512127 2976.330783578337 2935.6704576812444 4106.705221588868 4362.822011901193 3300.302757595954 3955.0954404667204 3827.60173869452 3988.139384570226 3712.3070737555217 3729.5571594524913 1.0105645662512128 0.7980386561538234 0.7871364701411919 1.1011240868585435 1.1697962587444743 0.8849047263510629 1.0604732067030014 1.026288531064214 1.0693332248474494 0.9953747630189151 1.0 11.864788622437446 -6.26300490137357 24.999439800041024 1.0378075219301286 0.858525771421866 0.44461723221057503 0.0861027133295648 88.4809571424553 1412947.8400982535 0.011419721795287965 0.027921000340173346 5.457517017957401e-07 6.26300490137357 -0.17928175050826256 VASPSQGQVGS(ph)SSPKR ddPTM_A549_MK2206_60min_R1 1 VASPSQGQVGSSSPKR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.333)S(0.333)S(0.333)PKR 74.953 0.00021912 17546000.0 1205.4 1813.0 1870.6 1617.8 1902.0 1370.5 1564.7 1285.4 2509.3 2682.2 2931.3 True False 1408.8420507994542 1905.273956050892 2135.8792080013945 2014.1610726258027 1622.2183195641649 1515.5254003357268 1848.9857361951404 1467.609386372404 1940.947556528696 2076.2891571311966 2203.3773102356495 0.6394011793871017 0.8647061704775041 0.969366071838583 0.9141244503468132 0.7362417285628987 0.6878192823786692 0.8391598332277429 0.6660726601634308 0.8808965888466525 0.9423212027671916 1.0 11.105500850511598 -9.519933658256269 1.2099088542866954 0.9731612599587515 0.8003954574898385 0.3015830152402247 0.10207141319846397 0.34266043131485047 1.0357557977555583 0.02737043841083834 0.020693620855808222 3.0204130759444873e-10 9.519933658256269 -0.17276580246891293 VASPSQGQVGSS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 VASPSQGQVGSSSPK 15 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.003)S(0.951)S(0.045)PK 143.93 1.5278e-13 5781900.0 1697.4 1684.2 1699.8 1866.0 2404.4 1414.9 1837.5 2311.0 2564.7 3168.8 2958.8 True False 1983.8796225543335 1769.9185862001711 1940.8571997010429 2323.170083767924 2050.71594508942 1564.6237788653923 2171.3499650147446 2638.591327140677 1983.7995449843172 2452.96587917282 2224.0483012742625 0.8920128314738826 0.7958094188809214 0.872668637002638 1.0445681788641326 0.9220644821043086 0.7035026073709574 0.9763052195272358 1.186391197362442 0.8919768261542272 1.1029283301839263 1.0 11.118972405121058 VASPSQGQVGSS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 VASPSQGQVGSSSPK 15 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.007)S(0.702)S(0.291)PK 201.57 1.1156999999999999e-38 12333000.0 5269.9 5204.1 4733.8 4687.8 5885.8 4996.6 4979.5 5781.3 5451.9 5918.1 6317.2 True False 5804.896368504662 5642.667770790538 5055.064134651879 4977.354759233745 5472.401712907687 4955.909346217453 5168.997597386956 5665.987436157885 5222.7756024929495 5544.430156010732 5540.224448030211 1.0477727794166452 1.018490825366606 0.9124294840526131 0.8984030892472976 0.9877581250076182 0.8945322328916644 0.932994257881512 1.0226999807151114 0.9427010857565296 1.0007591223099304 1.0 12.435728709221905 -10.967285614775953 1.0548885744617127 1.001690603641643 0.9583676221834899 0.07738922340332133 0.04980721652325976 1.2696978428699546 2.34027604242426 0.043502185392272005 0.008540326883113484 1.0782373836835575e-11 10.967285614775953 -0.043322981458153165 VASPSQGQVGSS(ph)SPKR ddPTM_A549_MK2206_60min_R1 1 VASPSQGQVGSSSPKR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VASPS(0.003)QGQVGS(0.112)S(0.442)S(0.442)PKR 42.64 0.031669 18729000.0 1391.0 1480.6 1642.8 1485.1 1712.5 1476.7 1429.2 1320.9 2204.5 2791.3 2823.6 True False 1625.7667933151163 1555.956215846083 1875.7737425984658 1848.9495666686717 1460.5935185350318 1632.963413845873 1688.86714013555 1508.141620086593 1705.1842698631149 2160.743391357957 2122.4221926044347 0.7659959450952263 0.7331040078961677 0.883789167459041 0.8711506942922683 0.6881729392127823 0.7693867033316569 0.7957262914138364 0.7105756928766115 0.8034142668715101 1.0180554080555002 1.0 11.051495950618836 -10.351683166219614 0.7350121086355185 1.000983849384055 0.7792632382771625 0.6914506889456893 0.05838410673684494 0.3270280467385345 0.32285737597582215 0.03980830879980148 0.012118741238088572 4.449557606647976e-11 10.351683166219614 -0.22172061110689256 VASPSQGQVGSS(ph)SPKR ddPTM_A549_PD325901_60min_R1 3 VASPSQGQVGSSSPKR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.065)S(0.467)S(0.467)PKR;VASPS(0.004)QGQVGS(0.08)S(0.458)S(0.458)PKR;VASPSQGQVGS(0.004)S(0.498)S(0.498)PKR 181.94 2.3987999999999996e-34 469724500.0 12645.68 12234.85 13258.02 12311.3 14469.76 13169.3 13200.91 14560.18 14822.54 12960.7 13680.7 True False 13929.460124342404 13265.923747709809 14157.788964150852 13071.741040009047 13453.453975562066 13062.053587067505 13703.277853865131 14269.765787659753 14199.600190571342 12142.359190113093 11998.060629102583 1.160975973946573 1.10567233803869 1.1800064528603578 1.0894878300833166 1.1213023830642488 1.0886804118479025 1.1421244047247403 1.18933936315065 1.183491284927223 1.012026823790213 1.0 13.55051360647554 -10.861140160877925 1.1043054985659828 0.9998637663773958 1.1412120137817274 0.6874944112469994 0.034782741868389096 0.24070941200037288 0.5203669005629601 0.02609805779414671 0.006317715539043201 1.3767650705628978e-11 10.861140160877925 0.1413482474043316 VASPSQGQVGSSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 VASPSQGQVGSSSPK 15 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGSS(0.008)S(0.992)PK 220.59 1.3037999999999998e-46 9389800.0 2987.7 2803.4 3450.7 2622.4 4245.6 2673.6 2823.9 3437.9 4090.4 4491.4 3960.5 True False 3491.9507177480737 2946.081085710463 3940.0611477870248 3264.88811772401 3621.077864112311 2956.5185774079546 3336.966076846333 3925.232853127186 3163.9309310265726 3476.7896205872257 2976.998545760683 1.1729769645741663 0.9896145531900755 1.3235012000250272 1.096704639769908 1.2163519089617334 0.993120598469256 1.1209162603046119 1.3185202454051619 1.0627922326438775 1.1678842186665683 1.0 11.53964280149354 -8.97989433852633 19.774243650758937 1.0277009950672362 1.150520056211903 0.04725767389429969 0.11194195777670189 14.03672171544033 13806.603980282924 0.017431045618821226 0.01784524952181857 1.0473833396966701e-09 8.97989433852633 0.12281906114466667 VASPSQGQVGSSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 VASPSQGQVGSSSPK 15 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGSS(0.163)S(0.837)PK 251.02 1.4102999999999996e-76 17145000.0 6270.1 5428.1 7167.6 5598.4 7816.8 7179.1 6204.1 6460.3 7855.1 7440.3 7459.3 True False 6906.635936196346 5885.545036918607 7654.0364382802 5944.200453111095 7267.774934496045 7120.635789823022 6440.200420513787 6331.444248492692 7524.977463846071 6970.518188230458 6541.853388398616 1.055761345621814 0.8996754722990412 1.1700103906110064 0.9086416494219507 1.1109657314217383 1.0884737653171537 0.9844611363401845 0.9678364635503656 1.150282193298758 1.0655265066918254 1.0 12.675483711737867 -6.198717070402794 0.6404378513659921 1.0608879916094032 0.9944632996070012 0.0 0.08742769364148684 3.9161180098668043 2.051372112505112 0.016310053714352988 0.151658541917882 6.328239826225737e-07 6.198717070402794 -0.06642469200240197 VASPSQGQVGSSS(ph)PKR ddPTM_A549_MK2206_60min_R1 1 VASPSQGQVGSSSPKR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.051)S(0.155)S(0.794)PKR 144.72 1.0114e-14 141240000.0 3038.9 3498.4 3531.2 3777.9 4943.9 3790.1 3557.9 3322.0 4815.3 5291.2 5028.7 True False 3551.7920260282567 3676.4536171254495 4031.977258256457 4703.485669596377 4216.658859144728 4191.165866335236 4204.324375796441 3792.9036731983247 3724.642238454004 4095.914245102002 3779.935004940476 0.93964367677909 0.9726235007533797 1.066678991301849 1.2443297737788601 1.1155373977683325 1.1087931038119097 1.1122742508274022 1.0034309236113579 0.9853720324782826 1.083593828927887 1.0 11.884145712532717 -8.33507352667564 6.182452614269653 0.9933355162028511 1.0840501779228688 0.09352080888569836 0.07975922312497902 0.2725748879303 18.37311593749424 0.013185437801488169 0.015982393010194478 4.6230274625863065e-09 8.33507352667564 0.09071466172001774 VASPT(ph)SGVK ddPTM_A549_PD325901_60min_R1 1 VASPTSGVK 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.384)PT(0.612)S(0.004)GVK 127.76 5.4823999999999996e-05 396940000.0 4338.6 4486.5 3902.7 4819.6 5609.9 4499.0 4205.1 4996.5 5245.5 4412.8 5474.8 True False 4779.051478091491 4864.593100373118 4167.560690841586 5117.295745894231 5215.87997710436 4462.361635638695 4365.127381619013 4896.840887821575 5025.049876717616 4134.175054906839 4801.434307616631 0.9953383034961796 1.0131541511785962 0.8679824452102748 1.0657848088802426 1.0863170550579613 0.9293809619679568 0.9091298770233109 1.019870433310646 1.0465726603290726 0.8610291821234954 1.0 12.229249723700862 -8.477032499267679 24.993637619644158 1.0225836946804798 0.981888661418814 0.0 0.07822645230681011 852.8950171711207 464967.2871689208 0.010295275798366482 0.012446042371554871 3.3340146262167094e-09 8.477032499267679 -0.04069503326166579 VASRS(ph)PAR ddPTM_A549_MK2206_60min_R1 2 VASRSPAR 8 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 VAS(0.078)RS(0.922)PAR;VAS(0.011)RS(0.989)PAR 58.699 0.0039218000000000005 191165000.0 2366.7 2386.7 1367.3400000000001 1665.57 2784.0 2732.5 2454.5 2222.43 2594.91 3742.6 3113.9 True False 2766.141099740393 2508.1728355800674 1561.2493725374895 2073.634724770279 2374.4772879425004 3021.6513363132985 2900.450878437383 2537.466258406427 2007.1670282197736 2897.1440606514125 2340.6326907320263 1.1817920473781345 1.0715789989225706 0.6670202371860461 0.8859291476962818 1.0144595934870453 1.2909549406354253 1.239173873765847 1.084094171825329 0.8575318272565174 1.237761085762388 1.0 11.192682838575362 -8.748887337281742 24.941563152601557 0.9327233594206003 1.0491375318669276 0.0 0.18853342980495555 451.0117598889851 896183.4700214745 0.031002820712931506 0.03503585500612744 1.782841204098412e-09 8.748887337281742 0.11641417244632735 VASRS(ph)PAR ddPTM_A549_PD325901_60min_R1 4 VASRSPAR 8 1 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 SYNPO Synaptopodin 1 VAS(0.008)RS(0.992)PAR;VAS(0.012)RS(0.988)PAR;VAS(0.002)RS(0.998)PAR;VAS(0.01)RS(0.99)PAR 66.595 0.0023438 316732000.0 7067.7 6383.999999999999 5386.799999999999 5139.0599999999995 6113.1 5396.099999999999 4405.860000000001 4834.99 5884.0 6660.6 8083.4 True False 7785.207701034259 6922.002084649945 5752.380641459871 5456.488064547927 5683.736945050119 5352.155950671255 4573.527413279101 4738.552331473723 5636.715942161175 6240.048579294889 7089.193044894477 1.098179673163371 0.9764160801961882 0.8114295385992688 0.7696909972676794 0.8017466739946454 0.7549739324034619 0.6451407634572572 0.6684191418494877 0.7951139017466378 0.8802198698466637 1.0 12.791405701071069 -5.535657546157971 3.083645185969375 0.8385392677985883 1.0893437838786626 0.4358719144828743 0.10031589043856293 0.27064589700531727 4.884479001955601 0.018716973871074443 0.1196360360099165 2.9130132083981723e-06 5.535657546157971 0.25080451608007426 VASS(ph)PAPPEGPSHPR ddPTM_A549_MK2206_60min_R1 3 VASSPAPPEGPSHPR 15 0 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 VAS(0.163)S(0.837)PAPPEGPSHPR;VAS(0.236)S(0.764)PAPPEGPSHPR;VAS(0.023)S(0.976)PAPPEGPSHPR 76.58800000000001 0.00053569 54202000.0 3077.5 3759.9 3291.2 2803.2 4203.9 3106.9 3076.7 2935.2 4580.5 4747.299999999999 4999.700000000001 True False 3596.906762348863 3951.2628501686436 3757.941649403503 3489.984125840432 3585.5118788726536 3435.6700958066945 3635.696564550131 3351.2735886730015 3543.0240635554505 3674.88163285696 3758.13650529976 0.9570984867836682 1.0513888584399569 0.9999481509264014 0.9286475147772901 0.95406642994908 0.9141951312736192 0.9674200390068421 0.8917381217917454 0.9427608759179036 0.9778467673206142 1.0 11.875801754810787 -4.880912818420403 17.055805304263412 0.966006193073587 0.00048250877487030484 0.0 0.04266011467185485 1144.4473895500819 187196.94047902274 0.006126973561459602 6108.526890544844 1.3154888808801218e-05 4.880912818420403 -0.9655236842987167 VASS(ph)PAPPEGPSHPR ddPTM_A549_PD325901_60min_R1 2 VASSPAPPEGPSHPR 15 0 O14578-3;O14578-4;H7BYJ3;O14578 O14578-3;O14578-4 CIT Citron Rho-interacting kinase 1 VAS(0.148)S(0.852)PAPPEGPSHPR;VAS(0.157)S(0.843)PAPPEGPSHPR 88.319 1.1472000000000001e-05 85858000.0 6546.6 6554.6 7204.3 6761.9 8296.4 8250.4 6653.8 7488.2 7538.4 8220.5 9030.3 True False 7211.206012647796 7106.979145370705 7693.227120975231 7179.567205610877 7713.689485026225 8183.211477811403 6907.014000099069 7338.841976620739 7221.587263492149 7701.456227080691 7919.630347788129 0.9105483079348282 0.897387735698499 0.9714123997117958 0.9065533226075452 0.9739961521285623 1.0332819990893753 0.8721384328282602 0.9266647121567235 0.9118591331108103 0.9724514767575771 1.0 12.951217378116135 VASS(ph)PVMVSNPATR ddPTM_A549_MK2206_60min_R1 3 VASSPVMVSNPATR 14 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 VAS(0.058)S(0.942)PVMVSNPATR;VAS(0.11)S(0.89)PVMVSNPATR;VAS(0.129)S(0.87)PVMVS(0.001)NPATR 92.15100000000001 2.2151999999999997e-05 23317700.0 12071.4 12024.900000000001 10161.7 10233.4 14145.699999999999 10197.199999999999 10538.400000000001 11032.8 15403.5 16462.5 15238.9 True False 14108.757202605393 12636.91604749938 11602.781860337735 12740.583459394777 12064.88626869547 11276.260935646465 12453.090868740897 12596.733186532942 11914.631844334994 12743.609816297201 11454.66055775596 1.2317045216195728 1.1032117437074915 1.012931094887965 1.1122619823743374 1.0532731378518525 0.9844255863183392 1.0871636750779925 1.09970375141354 1.0401558199179972 1.1125261854807642 1.0 13.483647086651398 -2.0000000448838278 0.79560673562208 1.0317913771761806 49.69649492348458 0.4798240680546503 0.04777222575760407 221.54860941162715 0.7377655719120703 0.00680049057584787 19438.53272693737 0.009999998966511726 2.0000000448838278 48.664703546308395 VASS(ph)PVMVSNPATR ddPTM_A549_PD325901_60min_R1 2 VASSPVMVSNPATR 14 0 P51610;A6NEM2;P51610-2;P51610-4 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 VAS(0.117)S(0.882)PVMVS(0.001)NPATR;VAS(0.063)S(0.931)PVMVS(0.006)NPATR 105.99 7.1745000000000005e-06 76448000.0 16125.7 13724.1 12934.7 15178.2 16283.7 14910.2 15563.3 14891.3 15544.0 15391.400000000001 17167.9 True False 17762.769192887085 14880.678071733137 13812.526524669749 16115.722941806745 15139.989087715334 14788.776274661057 16155.569898064537 14594.281339501144 14890.739735716073 14419.584377287249 15056.35713628471 1.1797521161397082 0.9883319010726572 0.9173883429865368 1.0703600343650883 1.0055545940278658 0.9822280476478069 1.0730065547615635 0.9693102526327568 0.9890001678978834 0.9577073821221411 1.0 13.878085133812231 -5.2596672910801265 24.604476250050414 0.9974748426967728 1.179752192879078 0.6038126520586509 0.042922097879353305 56.89561910854552 789880.8658955664 0.005123797757957783 0.04527872409769979 5.499620332574972e-06 5.2596672910801265 0.18227735018230518 VAT(ph)PLPDPMASR ddPTM_A549_MK2206_60min_R1 1 VATPLPDPMASR 12 0 Q14126 Q14126 DSG2 Desmoglein-2 1 VAT(0.983)PLPDPMAS(0.017)R 69.86399999999999 0.003588 2063200.0 1534.1 1217.0 1297.0 1144.2 1662.7 1539.1 1387.6 1065.8 2015.1 2211.9 1886.4 True False 1793.0185748560168 1278.940101772717 1480.934102842836 1424.5290513650896 1418.1190325653708 1701.9665404281047 1639.7089586146724 1216.8804138756084 1558.6830674534633 1712.230253768733 1417.9548180085733 1.2645103723221567 0.901961110135305 1.0444155794207273 1.0046364194916657 1.000115810852865 1.200296736406882 1.156390131610497 0.8581940682599739 1.0992473438910655 1.207535128780373 1.0 10.469595847653146 -5.235458010680963 23.890010198885246 1.0398207919856266 1.2645109094092724 0.24943161439246975 0.1076253407693711 4262.456018705078 3919242.146998435 0.012563389987343953 1.2586898867326828 5.814896503244808e-06 5.235458010680963 0.22469011742364575 VAT(ph)PLPDPMASR ddPTM_A549_PD325901_60min_R1 2 VATPLPDPMASR 12 0 Q14126 Q14126 DSG2 Desmoglein-2 1 VAT(0.96)PLPDPMAS(0.04)R;VAT(0.98)PLPDPMAS(0.02)R 77.185 0.001159 7499000.0 3255.0 3551.2 3459.1 3902.2999999999997 4170.3 3427.8 4053.0 4092.0 4229.3 4381.8 3843.4 True False 3585.445203795649 3850.472086937482 3693.8553272580857 4143.336208233683 3877.392514753972 3399.885133283469 4207.239132886702 4010.3818498881024 4051.5572287869263 4105.132400197335 3370.6861653199685 1.0637137449001557 1.142340727699272 1.0958763723728162 1.22922633701805 1.1503273590544743 1.0086626183902614 1.2481847690757415 1.18978203641436 1.2019977624948435 1.2178922032059452 1.0 11.71882659314297 -10.879735602313536 1.1371087012422043 1.000279666632401 1.1524808616200228 0.0 0.0929518246026129 0.39397025817540493 0.9071703916188625 0.04687559513406785 0.011378333543783188 1.3190595351941406e-11 10.879735602313536 0.15220119498762186 VATLNS(ph)EEESDPPTYK ddPTM_A549_MK2206_60min_R1 2 VATLNSEEESDPPTYK 16 0 Q00341;A0A024R4E5;Q00341-2;C9JHS7;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JQ82;C9JMQ6 Q00341 HDLBP Vigilin 1 VATLNS(0.989)EEES(0.011)DPPTYK;VATLNS(1)EEESDPPTYK 313.26 5.994599999999998e-144 124998000.0 23049.5 23657.8 19342.1 18581.1 28731.0 23566.7 21703.9 21393.7 30424.0 32182.0 31047.0 True False 26939.692093829457 24861.880969366128 22085.100624977968 23133.470334137288 24504.70795972555 26060.512551690616 25647.21769016791 24426.32249045844 23533.012577144662 24912.063848630296 23337.17304639111 1.1543682707531469 1.0653338739848268 0.946348582198701 0.9912713201445226 1.0500289778463543 1.1166953469422314 1.0989856243163962 1.0466701533172953 1.0083917418088406 1.067484214952193 1.0 14.510342189996456 -8.739686470159231 4.106946394028971 1.0036715298039784 1.056393842915812 0.029692985525712978 0.05690860850728059 0.30691243462127016 11.430009224301099 0.00993195829562504 0.010957561714808188 1.8210150279929695e-09 8.739686470159231 0.05272231311183351 VATLNS(ph)EEESDPPTYK ddPTM_A549_PD325901_60min_R1 3 VATLNSEEESDPPTYK 16 0 Q00341;A0A024R4E5;Q00341-2;C9JHS7;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JQ82;C9JMQ6 Q00341 HDLBP Vigilin 1 VATLNS(1)EEESDPPTYK;VAT(0.003)LNS(0.997)EEESDPPTYK;VATLNS(1)EEESDPPTYK 298.6 1.1791999999999997e-124 160650000.0 41862.5 42785.5 40954.8 38808.9 53926.9 41395.5 42954.0 43084.7 46225.2 45991.9 51029.1 True False 46112.3501824563 46391.184240725306 43734.23900921896 41206.03761159319 50139.26058170539 41058.3887726343 44588.6379753307 42225.341859206725 44282.51559646312 43087.96358497323 44752.844200116844 1.0303780911948364 1.0366086238738808 0.9772393194420652 0.9207467893512252 1.1203591967809385 0.9174475836449095 0.9963308203596651 0.9435230902954874 0.9894905315615115 0.9627983283543068 1.0 15.449691753166816 VATLNS(ph)EEESDPPTYKDAFPPLPEK ddPTM_A549_MK2206_60min_R1 1 VATLNSEEESDPPTYKDAFPPLPEK 25 1 Q00341;A0A024R4E5;Q00341-2;C9JHS7;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JQ82 Q00341 HDLBP Vigilin 1 VAT(0.005)LNS(0.985)EEES(0.009)DPPTYKDAFPPLPEK 122.77 9.1799e-18 13033000.0 2513.3 2840.8 3068.9 2968.2 3975.0 3407.7 3178.6 2581.9 4992.2 3915.1 4690.2 True False 2937.48359571451 2985.3845859621465 3504.116166703454 3695.4091332475596 3390.2827656506593 3768.30055215181 3756.1104755351666 2947.892231737133 3861.4746709052592 3030.67619084496 3525.493897065208 0.8332119361090977 0.8467989657980476 0.9939362452507576 1.048196150991439 0.961647605878114 1.068871670800147 1.0654139775031053 0.8361643269872348 1.095300341923649 0.8596458480236887 1.0 11.783609667828332 -5.796888503551919 3.521891557689741 1.0282385759081487 0.8333860954305077 0.258248410991609 0.08449682228784262 0.13041610221739436 3.3011149304900984 0.009597882144697142 0.03765927397883484 1.5962889099817505e-06 5.796888503551919 -0.19485248047764103 VATLNS(ph)EEESDPPTYKDAFPPLPEK ddPTM_A549_PD325901_60min_R1 4 VATLNSEEESDPPTYKDAFPPLPEK 25 1 Q00341;A0A024R4E5;Q00341-2;C9JHS7;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JQ82 Q00341 HDLBP Vigilin 1 VAT(0.002)LNS(0.967)EEES(0.03)DPPTYKDAFPPLPEK;VAT(0.005)LNS(0.922)EEES(0.072)DPPT(0.001)YKDAFPPLPEK;VAT(0.006)LNS(0.763)EEES(0.191)DPPT(0.04)YKDAFPPLPEK;VAT(0.003)LNS(0.948)EEES(0.048)DPPTYKDAFPPLPEK 149.84 5.836600000000001e-33 56720600.0 12638.8 12063.0 14856.1 14791.7 17130.5 18759.9 16619.3 18282.2 18560.8 18738.5 16987.7 True False 13921.881671807201 13079.59134510218 15864.324282986558 15705.34971461192 15927.312777016748 18607.12559422502 17251.756555929915 17917.547178891564 17780.75412292067 17555.347912067577 14898.320593902803 0.9344597992813222 0.8779238748866134 1.0648397705630723 1.0541691337370869 1.0690676628032199 1.2489411458792248 1.157966526978233 1.2026554983804276 1.193473721474185 1.1783440825707678 1.0 13.862862092290483 -5.955644697092204 1.5527675905903853 1.1161030307783528 0.894498758984687 0.5717095795521769 0.07401568774020906 0.336117383915583 1.4381868671624956 0.013545911070760596 0.07558601303716384 1.1075295001323183e-06 5.955644697092204 -0.22160427179366582 VATLNSEEES(ph)DPPTYK ddPTM_A549_PD325901_60min_R1 1 VATLNSEEESDPPTYK 16 0 Q00341;A0A024R4E5;Q00341-2;C9JHS7;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JQ82;C9JMQ6 Q00341 HDLBP Vigilin 1 VAT(0.001)LNS(0.264)EEES(0.735)DPPTYK 222.57 9.576700000000001e-55 19815000.0 4678.8 4275.2 5284.7 3733.8 5025.0 4397.9 4881.6 4580.9 4733.4 4192.9 5175.2 True False 5153.788331649486 4635.4861078157055 5643.351521482699 3964.428345924944 4672.061335308904 4362.084960519097 5067.3719593140195 4489.530355853468 4534.471658841899 3928.1595784352085 4538.6832082957535 1.1355250179676455 1.0213284107035752 1.2433896049779032 0.8734754473894117 1.0293869655342684 0.961090422117615 1.1164850523279384 0.9891702394314623 0.9990720767983636 0.8654844143462939 1.0 12.148058079003018 -6.259982239898685 24.999264053592615 0.9997902590420944 1.122205742532896 0.39028044446481513 0.08264785028203576 95.5118741744988 1638616.1022538417 0.008929661019453835 0.02230843769510987 5.495633473210632e-07 6.259982239898685 0.12241548349080156 VATLNSEEES(ph)DPPTYKDAFPPLPEK ddPTM_A549_MK2206_60min_R1 1 VATLNSEEESDPPTYKDAFPPLPEK 25 1 Q00341;A0A024R4E5;Q00341-2;C9JHS7;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JQ82 Q00341 HDLBP Vigilin 1 VAT(0.001)LNS(0.322)EEES(0.676)DPPT(0.002)YKDAFPPLPEK 138.61 7.629e-25 17793000.0 2794.1 3255.2 3176.1 2836.6 4213.3 3245.1 2986.0 2806.3 5828.1 5090.0 4540.3 True False 3265.6757708136342 3420.875775916634 3626.518738657772 3531.567127339814 3593.5291513247607 3588.494328076958 3528.5175485899476 3204.1016189333104 4508.044655563264 3940.1654648414706 3412.8182040947427 0.9568853585272825 1.0023609730551202 1.062617028444887 1.0347949747521257 1.0529506514625357 1.051475382946398 1.0339014086236376 0.9388433333744495 1.3209155559925387 1.154519587393788 1.0 11.73674785086084 -8.733444985652588 24.9998763971541 1.1515435697669787 1.0213196101575235 0.3940582694627225 0.07800355623239941 248.37870375863125 221809.88224306292 0.019696588224990385 0.02233142256683315 1.847374796690049e-09 8.733444985652588 -0.1302239596094552 VATTPGS(ph)PSLGR ddPTM_A549_PD325901_60min_R1 2 VATTPGSPSLGR 12 0 A0A494C067;A0A2R8Y4T1;A0A087WWW7;E9PGF5;E9PF55;Q9HBL0;H0Y4U1 A0A494C067 TNS1 Tensin-1 1 VATT(0.004)PGS(0.991)PS(0.004)LGR;VAT(0.003)T(0.034)PGS(0.831)PS(0.133)LGR 133.18 5.2908e-08 52341000.0 16420.4 16720.9 16578.3 17742.7 20218.0 15800.699999999999 17279.0 17429.9 19350.5 18695.4 18454.800000000003 True False 18087.386919940414 18130.028925003666 17703.40313141646 18838.626282404657 18797.95742831351 15672.024337905385 17936.56180043161 17082.246971007964 18537.2657781764 17514.969253423085 16184.976594615948 1.1175417408979953 1.1201764067446816 1.093817036306721 1.163957585744762 1.1614448323988797 0.9683068891875197 1.1082229063215538 1.0554384722861139 1.145337818056713 1.0821745185130245 1.0 13.982367658790949 -10.940782685414218 1.1121913018054488 0.9979642318634262 1.105989554376228 0.09334073202544724 0.057241939476388504 0.47128189950602933 1.0030694732774732 0.04065336574823429 0.008800941369001386 1.1460862827456708e-11 10.940782685414218 0.10802532251280172 VAVAT(ph)PAK ddPTM_A549_MK2206_60min_R1 4 VAVATPAK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VAVAT(1)PAK;VAVAT(1)PAK;VAVAT(1)PAK;VAVAT(1)PAK 93.325 0.002716 340270000.0 23957.7 25134.0 22544.8 22666.1 31809.5 24722.1 22927.7 21209.9 36908.3 34544.7 36188.7 True False 28001.17405047128 26413.213244006132 25741.991643616937 28219.29551751991 27130.364687789854 27338.176212798156 27093.366309044108 24216.468277594555 28548.628980443988 26741.02827766387 27202.047032690214 1.0293774588662652 0.9710009401962986 0.9463255325116288 1.0373960269830873 0.9973648179927703 1.0050043726468214 0.9960046858416391 0.8902443352330167 1.049502963734145 0.9830520565429391 1.0 14.731427602083441 VAVAT(ph)PAK ddPTM_A549_PD325901_60min_R1 2 VAVATPAK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VAVAT(1)PAK;VAVAT(1)PAK 100.48 0.0025120999999999997 584780000.0 11994.8 13044.7 13300.0 13822.3 14478.6 13217.599999999999 14380.6 14831.2 13612.2 15156.4 15449.4 True False 13212.503265894948 14144.022649378638 14202.6179793971 14676.072078279074 13461.673084458409 13109.960247881314 14927.861602366269 14535.380081148676 13040.126571700619 14199.422317392593 13549.221741815656 0.9751485006049073 1.043899267345172 1.0482238943337188 1.083167163246412 0.993538473351052 0.9675803155115034 1.1017504832986718 1.07278339362397 0.9624262426421242 1.0479880385727458 1.0 13.725922366075563 -8.772282679525837 24.984365035148166 0.9822568357782802 1.036547804057171 0.03792275978353565 0.046056298140586746 216.75615413871526 499432.3930799549 0.007430545165091489 0.007946751085902808 1.689340992364973e-09 8.772282679525837 0.054290968278890794 VAVAT(ph)PAKK ddPTM_A549_MK2206_60min_R1 5 VAVATPAKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK 99.65299999999999 0.00066078 3283062600.0 39529.8 39123.0 41807.8 38658.3 50917.5 40857.5 39056.600000000006 35753.1 58793.9 55845.399999999994 56606.5 True False 46201.46382917892 41114.193592156116 47736.7746991771 48129.585235437065 43427.60320000436 45181.01353098647 46152.67866318087 40821.211414276615 45477.17552456566 43229.885353685255 42549.543790077565 1.0858274781303996 0.9662663786713462 1.1219103766350882 1.1311422155990483 1.020636165084608 1.0618448403087828 1.0846809284461365 0.9593807072449977 1.0688052438101772 1.0159893973708443 1.0 15.37685604318052 VAVAT(ph)PAKK ddPTM_A549_PD325901_60min_R1 8 VAVATPAKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK 96.015 0.00060968 4972672000.0 58847.3 59553.1 64534.00000000001 61409.59999999999 70377.5 66541.6 70094.0 72069.9 72742.1 67354.8 72667.0 True False 64821.4345749074 64571.84873862263 68913.66531446713 65202.731520679336 65434.42718919448 65999.70727139724 72761.46552690858 70632.40930675702 69685.00250446687 63102.0064331579 63729.41967406627 1.0171351772293873 1.013218840982153 1.0813477616290066 1.023118237293672 1.026753852833561 1.0356238548686305 1.141724903490966 1.1083171581978146 1.093451075827451 0.990155045438713 1.0 15.959671903046114 -7.562563367620615 24.999859192585596 1.0590850148490594 1.0332388961622618 0.11528335190439731 0.04451316433464712 392.5350591111655 247280.66752885818 0.007814726138571738 0.01159112294996061 2.7380201024151228e-08 7.562563367620615 -0.025846118686797537 VAVATPAK ddPTM_A549_MK2206_60min_R1 2 VAVATPAK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 98.29899999999999 0.006753699999999999 5940000.0 5899.5 7235.4 6877.9 6758.700000000001 7433.1 6376.0 5994.6 6643.799999999999 9720.599999999999 9158.6 9030.5 False True 6895.191371072991 7603.650955107894 7853.289642207202 8414.58180340957 6339.700836568028 7050.70408795374 7083.741224640756 7585.578995784168 7518.899620608474 7089.665899076049 6787.977620879143 1.0157946528674564 1.1201644112260802 1.156941003761012 1.239630162823041 0.9339601852940321 1.0387046749044189 1.0435716822123682 1.117502063125795 1.1076789053459881 1.0444445010055636 1.0 12.728766093163774 -10.816076493805692 0.9555474243534197 0.9975391879303768 1.0885442209416565 0.08233730376178328 0.07695560148871997 0.9437485773452537 1.4620474811621578 0.061140591608131095 0.013626896283987406 1.527297026380262e-11 10.816076493805692 0.09100503301127971 VAVATPAK ddPTM_A549_PD325901_60min_R1 2 VAVATPAK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 140.98 0.00298 11875500.0 6253.1 7042.0 6373.799999999999 7314.7 9033.099999999999 8559.5 7836.8 7774.6 9016.5 8190.5 8225.0 False True 6887.910108711079 7635.454053901154 6806.364396773029 7766.51240611099 8398.646218503254 8489.794269893186 8135.033712461505 7619.52950394429 8637.567860723359 7673.350432200526 7213.377142570834 0.9548800752508889 1.058513079655765 0.9435752855072892 1.076681872111711 1.1643154173843728 1.1769513921280206 1.1277704675181028 1.0563054382636514 1.1974374401897618 1.0637667046292492 1.0 12.816459139986241 -6.434788323804872 5.861084560657766 1.106113930908771 0.9939492164186763 0.4471959669338532 0.06107366604408307 0.23239728357616182 12.3346688419394 0.011235918044368352 0.026321516487289684 3.6746135842481067e-07 6.434788323804872 -0.1121647144900948 VAVATPAKK ddPTM_A549_MK2206_60min_R1 1 VAVATPAKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 73.985 0.0035872 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VAVATPAKK ddPTM_A549_PD325901_60min_R1 2 VAVATPAKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 77.67699999999999 0.0027033 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VAVEELS(ph)PGGQPR ddPTM_A549_MK2206_60min_R1 2 VAVEELSPGGQPR 13 0 Q9H611-2;Q9H611;Q9H611-3 Q9H611-2 PIF1 ATP-dependent DNA helicase PIF1 1 VAVEELS(1)PGGQPR;VAVEELS(1)PGGQPR 100.55 0.00015157 5185500.0 2805.2 3048.5 2442.7 2696.34 2967.2 2976.7 2757.9 2957.3999999999996 4238.7 3272.6 4444.3 True False 3278.6491794446915 3203.655628803718 2789.1115906046234 3356.9434210433024 2530.728810626071 3291.692418226458 3258.974731164171 3376.6205066576513 3278.641217813012 2533.317387080589 3340.657653559956 0.9814382434401245 0.958989504773037 0.8348989569860353 1.0048750183862725 0.7575540726028038 0.9853426359683044 0.9755488496976815 1.0107652015941746 0.9814358601873328 0.7583289429196587 1.0 11.705916429317114 -7.478080212819147 24.99995359776338 0.991227131472884 0.9077463758246598 0.0 0.09553521024234782 411.52646108218994 229653.59759806198 0.008759709723533517 0.014002951125786568 3.3259811779881734e-08 7.478080212819147 -0.08348075564822421 VAVEEVDEEGK ddPTM_A549_MK2206_60min_R1 1 VAVEEVDEEGK 11 0 P02545;P02545-3;P02545-6;P02545-5;P02545-4;A0A0C4DGC5;P02545-2;Q5TCI8 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 161.76 2.6261999999999996e-31 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VAVNALAVGEPGT(ph)ASKPASPIGGPTQEEK ddPTM_A549_MK2206_60min_R1 1 VAVNALAVGEPGTASKPASPIGGPTQEEK 29 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 EP400 E1A-binding protein p400 1 VAVNALAVGEPGT(0.38)AS(0.38)KPAS(0.241)PIGGPTQEEK 100.86 9.730599999999999e-15 5739100.0 532.01 755.93 631.83 992.81 1581.6 838.84 1031.9 617.38 1359.2 1033.9 1628.2 True False 621.8002816042958 794.4036081619142 721.4329947565071 1236.048494568935 1348.9487351328512 927.6054920230735 1219.382872870049 704.895505646954 1051.3433701963913 800.341271925265 1223.873003966051 0.5080594796921788 0.6490899019649837 0.5894672015957947 1.0099483284323032 1.102196658281932 0.7579262627879684 0.9963312115869444 0.575954779101008 0.8590297905006772 0.6539414378221432 1.0 10.257238148204205 -6.250375502708949 23.797733627273928 0.914678871438433 0.5888938897163564 0.3696511934549487 0.15918266246602022 236.89586137050054 509545.8030489981 0.019587573647576694 0.05122893660969205 5.61855319868036e-07 6.250375502708949 -0.3257849817220766 VAVNALAVGEPGTASKPAS(ph)PIGGPTQEEK ddPTM_A549_MK2206_60min_R1 2 VAVNALAVGEPGTASKPASPIGGPTQEEK 29 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 EP400 E1A-binding protein p400 1 VAVNALAVGEPGT(0.001)AS(0.005)KPAS(0.993)PIGGPT(0.002)QEEK;VAVNALAVGEPGTAS(0.001)KPAS(0.999)PIGGPTQEEK 109.71 2.1209e-15 16389900.0 1468.9 1833.02 1756.6599999999999 1851.95 2369.3999999999996 1384.8200000000002 2190.45 1933.75 2639.26 2594.2 3141.0 True False 1716.8144088429715 1926.3128885385565 2005.7808026984562 2305.6778331371956 2020.8643987252 1531.3607332308818 2588.426411355944 2207.8649843610033 2041.471824032171 2008.1684182498527 2361.003012810077 0.7271546878712412 0.8158875181806099 0.8495460581014533 0.976567086372739 0.8559346971438031 0.6486060055502636 1.0963249082326187 0.9351385713537027 0.8646629474658745 0.850557329810317 1.0 11.20518416721271 -7.768371066071343 24.999998277665078 0.9453059391251806 0.8235919774149008 0.3211716672017856 0.0983883196949706 172.1901479309438 621025.4898719728 0.015605049980791355 0.02181447451724771 1.7046253156528844e-08 7.768371066071343 -0.12171396171027982 VAVNALAVGEPGTASKPAS(ph)PIGGPTQEEK ddPTM_A549_PD325901_60min_R1 2 VAVNALAVGEPGTASKPASPIGGPTQEEK 29 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 EP400 E1A-binding protein p400 1 VAVNALAVGEPGT(0.004)AS(0.002)KPAS(0.994)PIGGPTQEEK;VAVNALAVGEPGTASKPAS(0.997)PIGGPT(0.003)QEEK 184.84 6.0851e-67 53165000.0 4476.1 4285.1 4480.200000000001 4113.9 5220.4 5427.5 4915.9 4418.1 5176.799999999999 4791.9 5257.299999999999 True False 4930.510376869338 4646.220415559761 4784.253313631195 4368.006259655211 4853.737113402306 5383.300239481888 5102.977264583699 4329.977529567601 4959.2370988069315 4489.33861620923 4610.68542877053 1.0693660309382875 1.0077070941703143 1.0376447032750504 0.9473659235997735 1.0527148703563989 1.1675704887369383 1.1067719417033492 0.9391179676992664 1.0755964976186512 0.9736813941363035 1.0 12.170765523642451 -5.1896890378289156 19.560725213992693 1.0373219143807135 1.0693718196385273 0.01914017116160338 0.06574479800334866 34626.73205663243 9433069.995603852 0.008745705147593517 35.45080056899692 6.461166938946923e-06 5.1896890378289156 0.032049905257813815 VAVNDAHLLQYNHR ddPTM_A549_MK2206_60min_R1 1 VAVNDAHLLQYNHR 14 0 P17931 P17931 LGALS3 Galectin-3 0 112.44 6.9607e-06 1877800.0 632.82 519.99 804.01 427.37 711.94 438.75 603.6 500.06 630.25 582.61 604.7 False True 739.6245450364282 546.4552699431349 918.0307078077632 532.0756691853684 607.2145691012155 485.17823378132084 713.2663068750476 570.9450363695221 487.49938130243936 450.9979963597817 454.5363011290203 1.6272067669827004 1.2022258037164415 2.0197082290841712 1.1705900449837527 1.3358989537094363 1.0674136093777091 1.5692174752673642 1.2561043748350897 1.0725202367589612 0.9922155727486457 1.0 8.828251708324935 -7.5818012743692895 0.31742663789893955 0.9667685025183964 1.639898217149204 0.37701506696695897 0.24006661028127846 1.3702646589766567 0.292322003989096 0.12809988016193105 0.3287023156871448 2.6193813175450695e-08 7.5818012743692895 0.6731297146308076 VAVNDAHLLQYNHR ddPTM_A549_PD325901_60min_R1 1 VAVNDAHLLQYNHR 14 0 P17931 P17931 LGALS3 Galectin-3 0 110.15 1.154e-05 2196100.0 805.12 809.02 721.4 717.55 1063.7 705.29 476.29 797.92 1111.6 1182.0 1030.3 False True 886.8551897019825 877.1989546559369 770.358542130607 761.8714338257126 988.9893815657872 699.5463520781541 494.4154765858887 782.0048596438696 1064.883317693128 1107.3683182786174 903.5796316098154 0.9814909042625976 0.9708042589374456 0.8525629786033778 0.8431702167393529 1.0945237663268328 0.7741944678764437 0.5471742160732854 0.8654520667433059 1.1785162927986041 1.2255348389225338 1.0 9.8195079398033 -8.744403279158876 23.979539754822447 1.084299347976089 0.8623515412135335 0.40105985138809364 0.14250122526899991 130.7748968291973 184074.69373928706 0.02521593785145689 0.028551090462654312 1.8013442634916535e-09 8.744403279158876 -0.22194780676255543 VAVPTGPTPLDS(ph)TPPGGAPHPLTGQEEAR ddPTM_A549_PD325901_60min_R1 1 VAVPTGPTPLDSTPPGGAPHPLTGQEEAR 29 0 A0A0A0MR08;O94966-2;O94966-7;O94966-6;O94966-5;E7ESU0;O94966-4;O94966-3;O94966 A0A0A0MR08 USP19 Ubiquitin carboxyl-terminal hydrolase 19;Ubiquitin carboxyl-terminal hydrolase 1 VAVPTGPT(0.003)PLDS(0.498)T(0.498)PPGGAPHPLTGQEEAR 85.0 5.097e-07 11595000.0 2037.9 1795.5 1753.9 1784.1 2173.5 1815.0 2289.5 2383.0 1725.0 2028.8 2019.0 True False 2244.7861077773123 1946.813086307799 1872.930201057487 1894.2998050149167 2020.8408581679412 1800.2192417613314 2376.6281753624708 2335.469195572664 1652.5042488490876 1900.7012217628248 1770.6757994955021 1.2677566996831904 1.099474611254348 1.0577487994081802 1.069817414093894 1.1412822487005898 1.016684839920581 1.3422153146497036 1.3189705287879812 0.9332618931822055 1.073432653399549 1.0 10.790084371807747 -8.790539807607873 24.99992926816642 0.9684847471806864 1.1556358791054588 0.29558357651658107 0.10741735927886664 153.97198725819018 132275.2923260952 0.01860461371848432 0.01980770520443501 1.6197955159867966e-09 8.790539807607873 0.1871511319247724 VAVPTGPTPLDST(ph)PPGGAPHPLTGQEEAR ddPTM_A549_MK2206_60min_R1 1 VAVPTGPTPLDSTPPGGAPHPLTGQEEAR 29 0 A0A0A0MR08;O94966-2;O94966-7;O94966-6;O94966-5;E7ESU0;O94966-4;O94966-3;O94966 A0A0A0MR08 USP19 Ubiquitin carboxyl-terminal hydrolase 19;Ubiquitin carboxyl-terminal hydrolase 1 VAVPTGPT(0.002)PLDS(0.209)T(0.789)PPGGAPHPLTGQEEAR 82.554 3.4923e-06 5794000.0 1691.8 1844.5 2040.0 1724.8 2974.3 2182.2 2173.1 1983.3 3416.9 2963.8 3435.6 True False 1977.334479461189 1938.377171503514 2329.3026752501055 2147.3760774292155 2536.7844100313837 2413.1189555728733 2567.9241409379833 2264.438848601516 2642.977605668078 2294.275521551503 2582.445702263706 0.765682886469949 0.7505974548871955 0.901975469690727 0.8315280648676874 0.9823185857529175 0.9344316333379613 0.994376818334266 0.8768582613824432 1.0234397584240826 0.8884119110579555 1.0 11.334522300393893 -5.08363935846393 0.35330238045317225 1.0121436954312597 0.4925915158267438 0.5317955573137818 0.06106469551008105 2.245290731411964 0.17335671032021324 0.013340235062344004 0.5084414056586418 8.248227699845608e-06 5.08363935846393 -0.5195521796045159 VAVPTGPTPLDST(ph)PPGGAPHPLTGQEEAR ddPTM_A549_PD325901_60min_R1 1 VAVPTGPTPLDSTPPGGAPHPLTGQEEAR 29 0 A0A0A0MR08;O94966-2;O94966-7;O94966-6;O94966-5;E7ESU0;O94966-4;O94966-3;O94966 A0A0A0MR08 USP19 Ubiquitin carboxyl-terminal hydrolase 19;Ubiquitin carboxyl-terminal hydrolase 1 VAVPTGPT(0.002)PLDS(0.235)T(0.763)PPGGAPHPLTGQEEAR 87.20299999999999 3.2449e-09 9267900.0 2395.8 2241.6 2522.1 1853.9 3075.4 3188.7 2797.2 2905.2 2566.1 2408.5 3000.3 True False 2639.019852305257 2430.507498895884 2693.264872619354 1968.4111924876145 2859.394513554029 3162.732284410116 2903.6489766865707 2847.2535069146884 2458.2557408531275 2256.4268989628185 2631.2821204687248 1.0029406697884429 0.9236970372690118 1.0235561028095261 0.7480806323181227 1.0866924877841184 1.201973843780279 1.1035110808145983 1.0820783848170152 0.934242558686647 0.8575389470441386 1.0 11.361550224150612 -4.906391187367621 18.736154163200652 0.9923888757385579 1.6033644816184014 0.0 0.1206841454797356 3572.533429545578 1096081.480373194 0.015602518749601476 49308.3126075373 1.2405344025074073e-05 4.906391187367621 0.6109756058798435 VAVTASEVQQAESEVS(ph)DIESR ddPTM_A549_PD325901_60min_R1 2 VAVTASEVQQAESEVSDIESR 21 0 Q9BV36;H7C3K9;Q9BV36-5;H7C052;H7C190;Q9BV36-4;Q9BV36-2 Q9BV36;Q9BV36-2 MLPH Melanophilin 1 VAVTASEVQQAES(0.005)EVS(0.995)DIESR;VAVTASEVQQAES(0.01)EVS(0.99)DIESR 252.4 4.458899999999999e-98 13301000.0 2624.3 2310.3 2607.87 2637.5 2711.1 2735.5 3068.4 2661.0 2777.8 3591.3 3333.4 True False 2890.7170040924498 2504.997088998555 2784.855740596265 2800.412384802892 2520.681688787258 2713.2229949521343 3185.169641092905 2607.924267485883 2661.058726059708 3364.544705104908 2923.4129321636005 0.9888158365479512 0.856874190244695 0.9526043036743392 0.9579257018372439 0.8622393576543825 0.9281011810206689 1.08953805534943 0.8920820725643345 0.9102575612163946 1.1508961556843182 1.0 11.51343790891685 -7.549063832560005 24.999980212487 0.9617221123918064 0.9206560415780298 0.09896376140035112 0.08291472946463753 432.37283947234056 412802.2503318657 0.009511569345090126 0.014108160965658161 2.8244648048479053e-08 7.549063832560005 -0.041066070813776556 VAVTSSSSSSSSSSSIPS(ph)AEKVPTTK ddPTM_A549_MK2206_60min_R1 1 VAVTSSSSSSSSSSSIPSAEKVPTTK 26 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 VAVT(0.001)S(0.002)S(0.007)S(0.019)S(0.074)S(0.074)S(0.074)S(0.081)S(0.081)S(0.081)S(0.074)S(0.068)IPS(0.352)AEKVPT(0.006)T(0.006)K 56.247 0.001045 2892000.0 1011.3 1076.2 1116.3 853.55 1368.9 717.96 868.54 1188.9 1612.5 1718.5 1218.0 True False 1181.9827160888406 1130.973983178141 1274.6081256772993 1062.6697883173156 1167.5366233708644 793.9340506567231 1026.3424754361401 1357.4302158535475 1247.2713246333738 1330.289656449916 915.5369849101156 1.291026725921819 1.2353121739687842 1.392197307902789 1.1607065643794225 1.2752479065446922 0.8671785670511922 1.1210278692748858 1.4826601636271586 1.362338545783409 1.453015747452867 1.0 9.838474357467078 -10.96944028573884 1.2784691320933597 1.0019553901233353 1.2502180288297147 0.0 0.2032485899987478 0.5242034979897296 1.5431532632328957 0.11073711446617465 0.026475509153860467 1.0729011585645479e-11 10.96944028573884 0.24826263870637932 VAVTSSSSSSSSSSSIPS(ph)AEKVPTTK ddPTM_A549_PD325901_60min_R1 1 VAVTSSSSSSSSSSSIPSAEKVPTTK 26 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 VAVTSS(0.002)S(0.002)S(0.001)S(0.001)S(0.008)S(0.008)S(0.058)S(0.065)S(0.065)S(0.065)IPS(0.721)AEKVPT(0.001)T(0.001)K 102.03 1.6790000000000002e-12 6098700.0 1396.6 1528.2 1646.7 1537.5 2089.5 1930.2 1954.6 1863.0 2316.3 2010.3 1893.2 True False 1538.381803877419 1656.9867772183668 1758.4549644115184 1632.467883084152 1942.7407283836728 1914.4810911557695 2028.9833725981598 1825.8410035047739 2218.953966150227 1883.3693149200562 1660.3484019835992 0.926541563228255 0.9979753497752543 1.059087937393569 0.9832080309975071 1.1700801627313298 1.1530598571170732 1.2220226611319387 1.099673418737575 1.3364387639963204 1.1343217560061591 1.0 10.697270288327276 -6.762796496307504 24.973466800116704 1.1627915836741094 0.9969644053015041 0.49055668822305765 0.08208310893973608 34.64196532780353 637498.7407887651 0.017398061984614906 0.034199707950731566 1.726646782496489e-07 6.762796496307504 -0.1658271783726053 VAVVRT(ph)PPKS(ph)PSSAK ddPTM_A549_PD325901_60min_R1 1 VAVVRTPPKSPSSAK 15 2 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 2 VAVVRT(1)PPKS(0.839)PS(0.078)S(0.084)AK 57.745 0.004835 4228900.0 2292.3 2033.2 1962.5 2268.5 2848.8 2471.5 2204.9 2298.0 3494.1 1985.6 2385.1 True False 2525.0126084979306 2204.5448995160205 2095.687051471188 2408.6200928626963 2648.710115826468 2451.3729234232137 2288.8086760675765 2252.1645872538743 3347.2551280600574 1860.228877135385 2091.747820394613 1.2071305077404508 1.0539247982102011 1.0018832246593818 1.1514868424284075 1.2662664638640728 1.1719256496993775 1.0942087061124737 1.0766902995166014 1.6002192498656889 0.8893179469332247 1.0 11.030493216459151 VAVVRT(ph)PPKSPSSAK ddPTM_A549_PD325901_60min_R1 1 VAVVRTPPKSPSSAK 15 2 A0A0G2JQJ7;A0A0G2JPD5;P10636;I3L170;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 VAVVRT(0.999)PPKSPSSAK 49.606 0.0085912 3106800.0 1948.4 1722.3 1864.2 1997.9 2158.7 2465.2 2221.7 1925.3 2446.4 1910.7 1965.4 True False 2146.200133663729 1867.4442654123766 1990.715822345269 2121.305745439887 2007.0803591107122 2445.124228534454 2306.248009260889 1886.8983811313694 2343.5863155851657 1790.0580759178988 1723.6682596971086 1.2451352640448747 1.083412805745192 1.1549297906634814 1.2306925845537429 1.164423808246841 1.4185584811802028 1.337988325935847 1.0946992674001808 1.3596504445681399 1.0385165856871186 1.0 10.751266422115195 -4.127022760165633 9.384757714006266 1.1933519713126843 1.1965174266142893 0.0 0.1310307806742825 0.0 0.0 0.019762221090121775 0.0 7.464096401322328e-05 4.127022760165633 0.003165455301604947 VAYEGS(ph)DSEKGEGAEPLK ddPTM_A549_MK2206_60min_R1 1 VAYEGSDSEKGEGAEPLK 18 1 P78549-3;P78549-2;P78549;H3BRL9;A0A494C106;H3BPD5 P78549-3 NTHL1 Endonuclease III-like protein 1 1 VAYEGS(0.949)DS(0.051)EKGEGAEPLK 119.02 1.0526000000000001e-10 9535300.0 4120.5 4464.5 4480.7 3734.4 4998.4 4462.4 3756.1 4424.9 6542.8 5987.8 6562.4 True False 4815.939663447113 4691.723980578712 5116.130635780954 4649.3281676435845 4263.141981340439 4934.6082060986155 4438.534750254089 5052.143125687914 5060.866246704643 4635.151821292294 4932.774966973843 0.976314487421589 0.9511327826610726 1.0371708967132542 0.9425380640252179 0.8642482192849332 1.000371644588907 0.8998048319599382 1.024198987286724 1.0259673876445619 0.9396641550295299 1.0 12.268183757797024 -8.294649528407357 24.743390529182918 1.0135002524833097 0.954238619271875 0.12994258537543346 0.04917976561351209 523.6401437699409 390139.3516954863 0.007039419384947111 0.008510541641013454 5.074000101725838e-09 8.294649528407357 -0.05926163321143463 VAYHPYPEDYGDIEIGS(ph)HR ddPTM_A549_MK2206_60min_R1 2 VAYHPYPEDYGDIEIGSHR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAYHPYPEDYGDIEIGS(1)HR;VAYHPYPEDYGDIEIGS(1)HR 143.95 1.5135999999999998e-20 31769000.0 1253.68 1109.19 1049.1399999999999 1031.83 1803.0300000000002 1264.08 1524.23 1414.6100000000001 2053.54 1922.28 2456.8 True False 1465.2705344667838 1165.6430332664575 1197.9238277999482 1284.6283963206085 1537.8066754593979 1397.8441065716063 1801.1628610473053 1615.1352995614336 1588.41646882953 1488.0356129185582 1846.708755769436 0.7934497141950654 0.6312002526791449 0.6486804289292656 0.6956312912402718 0.8327283176922322 0.7569380402862664 0.9753367202165271 0.8746020695009286 0.8601337183608642 0.805777093041704 1.0 10.850740641649258 -7.391951750181528 0.2819010169772979 0.9912838507348338 0.6025635234994281 0.4420696926758595 0.08567154101896271 1.100235634893763 0.17392908824000572 0.04924963667287171 0.1449824848586664 4.055535896706878e-08 7.391951750181528 -0.3887203272354057 VAYHPYPEDYGDIEIGS(ph)HR ddPTM_A549_PD325901_60min_R1 3 VAYHPYPEDYGDIEIGSHR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAYHPYPEDYGDIEIGS(1)HR;VAYHPYPEDYGDIEIGS(1)HR;VAYHPYPEDY(0.003)GDIEIGS(0.997)HR 123.12 2.683e-14 43797000.0 3073.3700000000003 3343.2 3144.98 3116.04 3494.3999999999996 3207.25 3111.0699999999997 3564.15 3937.77 3799.77 3804.23 True False 3385.3762599045867 3624.9431969614184 3358.4172551010743 3308.5107137597015 3248.9653990255597 3181.131219360348 3229.4634712928278 3493.060232228416 3772.2792208640426 3559.8518737271966 3336.3338270008785 1.0146994981457818 1.0865049437274024 1.0066190702865148 0.9916605727472457 0.9738130437463278 0.9534810916148501 0.9679677270772034 1.0469756365382727 1.1306659994078132 1.0669951084982539 1.0 11.704047933895316 -8.448319580475316 7.160667771723841 1.0630751239256726 1.0001703956822638 0.3302054835362437 0.04291604391656471 0.3279401278604235 27.45305027675605 0.009540563234366603 0.011518908155122774 3.561889313377544e-09 8.448319580475316 -0.06290472824340876 VCEEIAIIPSK ddPTM_A549_PD325901_60min_R1 1 VCEEIAIIPSK 11 0 H0YN88;A0A075B716;H3BNC9;P08708;H0YN73 H0YN88 RPS17 40S ribosomal protein S17 0 71.016 0.007573399999999999 807320.0 1314.4 1774.0 1872.5 1707.6 1629.5 1947.9 1442.4 1704.3 1798.5 1812.6 1386.6 False True 1447.8369203898615 1923.501205853541 1999.5791102572239 1813.074573759023 1515.0495414698228 1932.0369482241867 1497.291321311565 1670.3063995025148 1722.9152994522226 1698.1521266597483 1216.0569903816063 1.1905995622257155 1.5817525174128018 1.6443136514759422 1.4909453982005143 1.2458705089096118 1.5887717134193697 1.2312673938428706 1.3735428624758468 1.416804732902823 1.3964412359710687 1.0 10.247995126777699 -11.855267752713807 0.30263619969863476 0.5644957804699713 1.4696723816224813 0.0009669325401678863 0.18783470706185915 3.9907063597794594 0.26489652115506357 1.3354298426278752 0.05923184455293674 1.395507732602018e-12 11.855267752713807 0.90517660115251 VDDDS(ph)LGEFPVTNSR ddPTM_A549_MK2206_60min_R1 2 VDDDSLGEFPVTNSR 15 0 J3KMZ8;Q92785;Q92785-2 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR 267.88 1.1836999999999997e-90 60819000.0 18081.9 18209.6 18407.1 15923.300000000001 23292.0 18544.3 17641.6 18823.0 24407.0 24036.2 25924.0 True False 21133.68265998893 19136.39086050983 21017.503565488325 19824.50921482409 19865.777654725825 20506.645517289915 20846.850363430825 21491.217893019868 18878.85346997008 18606.40572613411 19486.355333998228 1.0845374775197996 0.9820405372123227 1.0785754034167012 1.0173533672680124 1.019471179408579 1.0523592106273238 1.0698178292509588 1.1028854562414612 0.9688242437533596 0.9548427813830916 1.0 14.250176658279226 -8.78618541429211 24.99997950388914 0.9852781084563156 1.04802464616498 0.4805839328194327 0.034763734813951765 154.86271778212395 156451.14467489574 0.005747866944219456 0.006120409476298148 1.636117860924746e-09 8.78618541429211 0.06274653770866445 VDDDS(ph)LGEFPVTNSR ddPTM_A549_PD325901_60min_R1 2 VDDDSLGEFPVTNSR 15 0 J3KMZ8;Q92785;Q92785-2 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR 273.09 3.164299999999999e-91 89249000.0 17936.300000000003 18675.4 19668.2 18045.7 21631.0 20602.6 18287.1 20757.0 20256.2 20784.0 21482.0 True False 19757.179971993824 20249.24149932201 21003.00232649459 19160.341904241748 20111.71318289887 20434.81925637027 18983.025597585092 20342.98535144851 19404.90235683298 19471.694692980363 18839.85018561783 1.0486909278650356 1.0748090510178312 1.1148179056396155 1.0170113729921577 1.0675091884887689 1.0846593287652586 1.0075996045911533 1.079784878914704 1.0299923919589609 1.0335376609228495 1.0 14.20149987224295 -9.17881867084081 0.35689918447058894 0.9941402459969096 1.0733724079982179 0.23659394102448061 0.030340752214670936 0.8091851932412331 0.2744279372274573 0.023723199274893875 0.015029910412463777 6.624930539191535e-10 9.17881867084081 0.07923216200130823 VDDFLANEAK ddPTM_A549_MK2206_60min_R1 2 VDDFLANEAK 10 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 141.95 1.3749e-07 17354600.0 3325.05 3645.7 3402.1 3051.8 4688.2 3167.51 3724.6 3422.66 4453.1 3966.1000000000004 4184.7 False True 3886.237150332444 3831.2505579562803 3884.568936994304 3799.491137000507 3998.5719904209855 3502.6938057770303 4401.31160799669 3907.832536456646 3444.4799601394557 3070.155255423921 3145.5234981554668 1.2354818371604381 1.2180009337723667 1.2349514919447313 1.2079042293686653 1.2711944427583344 1.1135487647226314 1.39923024278077 1.2423472718446378 1.0950418784533948 0.9760395232222103 1.0 11.619084424292152 -8.94114819522102 2.407264233715246 1.036623325917657 1.2405887529220399 0.6734409054982291 0.06765972645086653 0.12130059668625037 1.3856836503950385 0.012428803162737307 0.012715441772289185 1.1451221223349965e-09 8.94114819522102 0.20396542700438292 VDDFLANEAK ddPTM_A549_PD325901_60min_R1 4 VDDFLANEAK 10 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ;;; 156.12 4.208300000000001e-08 29400800.0 15007.5 15026.300000000001 14825.0 15452.0 18301.399999999998 15140.3 14485.099999999999 16240.099999999999 16361.4 16039.2 18150.1 False True 16531.05035206241 16292.619035804444 15831.113649967076 16406.434945961824 17015.972800402462 15017.002416550462 15036.338407050855 15916.178465388011 15673.787256301146 15026.482174733006 15917.752762963508 1.038529156610969 1.0235502007364476 0.9945570763482381 1.0307004506399517 1.0689934096723896 0.943412216546744 0.9446269602852811 0.9999010980005193 0.9846733700230597 0.9440077628103222 1.0 13.95834905295786 -7.25943913675344 24.999993942049553 0.9860931158538658 1.0287665878224843 0.5033736640755739 0.027982305848658583 150.49074951775034 1880899.8125771924 0.003937447650577705 0.006613455555586027 5.502510288297169e-08 7.25943913675344 0.04267347196861848 VDDKPS(ph)SPGDSSK ddPTM_A549_MK2206_60min_R1 1 VDDKPSSPGDSSK 13 1 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.5)S(0.5)PGDSSK 136.81 1.3167e-08 21881000.0 4627.0 4564.1 4342.3 3232.1 4968.5 4486.4 4486.3 4201.2 5506.2 6320.7 6252.5 True False 5407.924480711032 4796.393195152715 4958.103434675748 4023.9646450944847 4237.640231732152 4961.1478701687 5301.402638392188 4796.732965635397 4259.054491594595 4892.8494800832 4699.831689778734 1.150663435984797 1.0205457369003201 1.0549534030034964 0.8561933513163599 0.9016578702059134 1.0556011784333215 1.1279984025644494 1.0206180310812845 0.906214258875962 1.041069085670503 1.0 12.198393376629078 -8.725271674892397 23.810864457559436 0.9557122877258764 1.0193881999969108 0.016517969090074303 0.08728152578864007 192.5714576972038 126778.07687790957 0.015314240088281325 0.01736431547052468 1.8824711326939096e-09 8.725271674892397 0.06367591227103442 VDDKPS(ph)SPGDSSK ddPTM_A549_PD325901_60min_R1 1 VDDKPSSPGDSSK 13 1 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.619)S(0.381)PGDSSK 129.32 1.3267e-08 68219000.0 7170.7 7672.5 6506.1 6863.2 7381.3 7913.6 7234.4 7795.9 7285.7 8501.2 8011.2 True False 7898.664185209658 8319.08850164109 6947.643070357556 7287.124276541881 6862.8629521026105 7849.154265345718 7509.709050815578 7640.4046587347575 6979.507365704235 7964.4327811761295 7025.873187180969 1.1242252706213283 1.1840647105358595 0.9888654243053878 1.037184145287105 0.9767985799436606 1.1171784710926556 1.0688648728413417 1.0874669176601466 0.9934007033372976 1.1335861848044178 1.0 12.778461821672668 -2.0000000000000004 0.248996640356207 0.9981053012223026 1.8972522403940124 0.0 0.06861975191441581 37.148336099056145 0.45057781332208546 0.02698193874930673 14.196157277679038 0.00999999999999999 2.0000000000000004 0.8991469391717098 VDDKPS(ph)SPGDSSKK ddPTM_A549_MK2206_60min_R1 1 VDDKPSSPGDSSKK 14 2 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.581)S(0.418)PGDSSKK 84.14 5.4033e-05 134630000.0 3751.0 4532.5 4229.7 3501.5 4605.5 3859.2 2904.0 3008.7 4900.4 6516.3 5990.5 True False 4384.07709685478 4763.184890127228 4829.535061522238 4359.367657188311 3928.037050868959 4267.577982470369 3431.6192100151397 3435.192438757313 3790.4672243307796 5044.263304233102 4502.893520610874 0.9736133170344268 1.05780535744959 1.0725403653042747 0.9681258589025903 0.8723362062392432 0.9477412607996599 0.7620920180119201 0.7628855585932857 0.8417847783832463 1.120227089791096 1.0 12.136636647506641 -6.531581197840573 4.089105137583644 0.8975085887312866 1.0360384186786573 0.25866185838445177 0.09940292668420891 0.20057712148735118 7.763028410905068 0.013259939760625086 0.029991990855546182 2.9404838749672144e-07 6.531581197840573 0.13852982994737073 VDDKPSS(ph)PGDSSK ddPTM_A549_MK2206_60min_R1 3 VDDKPSSPGDSSK 13 1 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.028)S(0.972)PGDSSK;VDDKPS(0.019)S(0.981)PGDSSK;VDDKPS(0.042)S(0.958)PGDSSK 206.52 2.2005999999999998e-31 901746000.0 34338.1 35416.7 34018.6 30386.2 43018.0 34275.9 34642.2 33010.5 46521.0 47141.0 46918.0 True False 40133.531794057344 37219.258753043345 38842.94901385451 37830.82036408836 36690.109185600006 37902.95298749899 40936.23932410003 37689.8394654164 35984.06777877156 36491.81535915359 35266.96572907453 1.1379921965039015 1.0553575558205541 1.1013975319637972 1.0726984752447857 1.0403534420130796 1.0747438063902197 1.1607530865733562 1.0687009411287238 1.0203335340841597 1.0347307914008965 1.0 15.106029835213626 -8.740142458286334 3.4671622082908655 1.0088600616920713 1.0890129158932116 0.4688989142024703 0.03374115913164446 0.12793587261530887 3.17128585666886 0.005736809947646161 0.006302532578519006 1.8191040539888054e-09 8.740142458286334 0.08015285420114027 VDDKPSS(ph)PGDSSK ddPTM_A549_PD325901_60min_R1 5 VDDKPSSPGDSSK 13 1 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.003)S(0.996)PGDSSK;VDDKPS(0.012)S(0.988)PGDSSK;VDDKPS(0.034)S(0.966)PGDSSK;VDDKPS(0.007)S(0.993)PGDSSK;VDDKPS(0.07)S(0.93)PGDSSK 201.4 1.1223e-30 1209323000.0 51398.0 50405.700000000004 52016.2 49493.700000000004 57797.100000000006 50637.0 53855.799999999996 56120.1 55234.100000000006 52979.0 55611.6 True False 56615.88712279222 54653.56523781954 55546.332130820716 52550.81344065174 53737.631085170586 50224.62906064386 55905.31194002457 55000.740580133235 52912.80285875673 49633.89689854732 48771.72575097778 1.1608341974992997 1.1205993717932738 1.1389043810840982 1.0774852156958625 1.1018193483566296 1.029789868767089 1.146264789264788 1.127717744927871 1.0849073319431584 1.0176776838279555 1.0 15.57375740150962 -14.999999999991951 0.14771036625352355 0.5912228674798307 1.144547579710522 0.5759018503684528 0.03411599246874237 30.747725571112476 0.30042548909342065 3.62761651880506 0.06898969203277615 1.0000000000185328e-15 14.999999999991951 0.5533247122306914 VDDKPSS(ph)PGDSSKK ddPTM_A549_MK2206_60min_R1 3 VDDKPSSPGDSSKK 14 2 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.248)S(0.751)PGDS(0.001)SKK;VDDKPS(0.018)S(0.98)PGDS(0.002)SKK;VDDKPS(0.016)S(0.984)PGDSSKK 133.93 2.084e-09 181270000.0 13145.0 14418.199999999999 14539.699999999999 12470.2 18097.5 11932.2 11057.0 11151.2 19571.8 23315.7 23433.2 True False 15363.554635605462 15152.024794888557 16601.648091830364 15525.399559808558 15435.381723613289 13194.857484046674 13065.913775873769 12731.916749117741 15138.818549742295 18048.667176543084 17614.08971658106 0.8722309743399881 0.860221847321759 0.942520922679437 0.8814193528941602 0.8763087943785798 0.7491081115378712 0.7417876249133751 0.7228257011279172 0.8594720927015227 1.0246721497934084 1.0 14.104442298872367 -10.164181232752895 0.9720066676574012 0.9869391198116357 0.8345614955448226 0.502583323269306 0.0669208759383409 0.36877912599065155 0.6930044908427073 0.030820927317511123 0.014128507422469754 6.852022292648048e-11 10.164181232752895 -0.15237762426681312 VDDKPSS(ph)PGDSSKK ddPTM_A549_PD325901_60min_R1 4 VDDKPSSPGDSSKK 14 2 Q9HC52;C9J6K3;C9JM54 Q9HC52 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.198)S(0.801)PGDS(0.001)SKK;VDDKPS(0.145)S(0.855)PGDSSKK;VDDKPS(0.064)S(0.86)PGDS(0.064)S(0.012)KK;VDDKPS(0.003)S(0.997)PGDSSKK 194.37 1.2279999999999998e-31 576534000.0 38594.3 39075.4 40700.5 40821.700000000004 45539.2 49172.1 48273.9 50800.3 44013.700000000004 48002.5 50471.1 True False 42512.36492437799 42368.42109312824 43462.68068198886 43343.16369619271 42340.683693711275 48771.65872055781 50110.989680991705 49787.04816443559 42163.95725076468 44971.6139578421 44263.474662663415 0.9604389453916391 0.957186967720506 0.9819084699794245 0.979208343369234 0.9565603246558041 1.101848851502322 1.1321070038647625 1.124788520193408 0.9525677225319662 1.0159982762441377 1.0 15.43382908603934 VDDLSS(ph)SPTSSPER ddPTM_A549_MK2206_60min_R1 2 VDDLSSSPTSSPER 14 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 VDDLS(0.22)S(0.349)S(0.349)PT(0.044)S(0.032)S(0.006)PER;VDDLS(0.066)S(0.463)S(0.463)PT(0.003)S(0.003)S(0.001)PER 97.273 4.3105e-05 1326700.0 822.79 578.94 817.11 903.7 880.81 709.79 982.75 746.22 1404.1 896.3 1034.1 True False 961.6568367158478 608.4055731473269 932.9884847909872 1125.106540568635 751.2440158019512 784.8995066795297 1161.3029540779537 851.9989702029061 1086.073591886958 693.8252074926154 777.3044302919135 1.2371688610531932 0.7827120873591865 1.2002871055817952 1.4474464530532853 0.9664733488265653 1.0097710447691182 1.4940130389348625 1.096094319033974 1.3972306725166708 0.8926042107235285 1.0 9.602335928761809 VDDLSS(ph)SPTSSPER ddPTM_A549_PD325901_60min_R1 1 VDDLSSSPTSSPER 14 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 VDDLS(0.087)S(0.455)S(0.455)PT(0.002)S(0.001)SPER 88.09200000000001 7.7727e-05 1954900.0 797.63 1004.4 984.44 827.5 997.43 1191.7 996.95 1275.4 1202.9 1296.0 1113.8 True False 878.6048104158284 1089.0443129421064 1051.250018318622 878.6127956111444 927.3739577466984 1181.995190306876 1034.8894778019724 1249.9611464680563 1152.346296197431 1214.1703388232559 976.8096609599264 0.8994636780643728 1.1148992034659908 1.0762076383289882 0.8994718528354005 0.9493906487732249 1.2100568181781808 1.0594586838801021 1.2796363472078067 1.179704032682275 1.242995833630547 1.0 9.931933658885924 -7.242584097858312 24.66863092176302 1.1087754867116588 0.9949376530791156 0.3565679830538526 0.10359917585767807 894.7297079118943 1170587.0320262145 0.016114677651815335 0.02787888566347568 5.720261753625793e-08 7.242584097858312 -0.11383783363254318 VDDS(ph)PSTS(ph)GGSSDGDQR ddPTM_A549_PD325901_60min_R1 1 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 2 VDDS(0.976)PS(0.084)T(0.076)S(0.371)GGS(0.26)S(0.232)DGDQR 51.147 0.020794999999999998 1630700.0 160.12 286.39 254.1 185.36 179.12 222.46 294.61 113.19 206.31 138.96 124.95 True False 176.37526452588608 310.52509038579234 271.34475402742885 196.80926621689642 166.5392291304539 220.64835951637787 305.8215447667778 110.93233665416278 197.63950816235095 130.18604188493808 109.58194212331011 1.6095285510400512 2.8337250131628933 2.476181282880446 1.7960008957993403 1.5197689135957366 2.0135467143672923 2.790802378941629 1.0123231483644732 1.8035773443397418 1.188024590205224 1.0 6.7758662676756165 -11.183632327971496 0.1717035033780299 2.3995402294813364e-11 2.43690366794649 0.36329869187553077 0.49874588784241686 9.83053701997737 0.3807464907797853 5.507031969560788 0.9683169526001938 6.5519062118334685e-12 11.183632327971496 2.4369036679224947 VDDS(ph)PSTSGGSSDGDQR ddPTM_A549_MK2206_60min_R1 2 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDS(0.932)PS(0.02)T(0.02)S(0.02)GGS(0.003)S(0.003)DGDQR;VDDS(0.921)PS(0.016)T(0.016)S(0.016)GGS(0.016)S(0.016)DGDQR 56.147 0.009891200000000001 14113700.0 201.68 142.21 146.08 213.59 479.58000000000004 369.83 154.27 340.24 131.94 510.29999999999995 433.37 True False 235.71865339740665 149.44788157197868 166.79634058849769 265.91955958841965 409.0344172957843 408.96516512671457 182.29886209677534 388.47006194129966 102.05580066488515 395.0228755812579 325.7522685964671 0.7236132365647725 0.4587777153966979 0.5120343176953294 0.8163245055334778 1.2556609937304375 1.2554484022130612 0.5596242288111342 1.1925321767214632 0.31329267822017554 1.2126481184098867 1.0 8.347631415786788 -6.263629041858409 23.863117049579813 0.7882375900631549 0.5542053507973691 0.09024197841346848 0.32240598376150453 218.88089105481617 2385424.1062416304 0.05051978406820944 0.12302859231575326 5.449679453808985e-07 6.263629041858409 -0.23403223926578576 VDDS(ph)PSTSGGSSDGDQR ddPTM_A549_PD325901_60min_R1 2 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDS(0.743)PS(0.105)T(0.105)S(0.016)GGS(0.016)S(0.016)DGDQR;VDDS(0.915)PS(0.084)T(0.001)SGGSSDGDQR 125.89 1.6786000000000003e-10 19962600.0 1125.97 1019.15 936.0600000000001 837.8799999999999 1056.29 647.8199999999999 728.72 1092.21 937.4 955.91 783.36 True False 1240.2776455046962 1105.037347207236 999.5866605860485 889.6339446364548 982.099834402675 642.5443687040361 756.4518383708848 1070.42501472783 898.0043378963097 895.5536794633782 687.0116861281812 1.80532248657163 1.6084695057153082 1.4549776674389026 1.294932768393213 1.4295242049484393 0.9352742925309593 1.101075649286332 1.5580885104887612 1.3071165396868694 1.3035494119619497 1.0 9.424190829394202 -2.0000000000000004 0.29912218334268836 1.1288839568988673 6.899385940874872 0.5184446209197195 0.1748074333681234 26.537263268504944 0.33179423293967086 0.0619425145978183 83.25480060985633 0.00999999999999999 2.0000000000000004 5.770501983976004 VDDS(ph)SEDKTEFTVK ddPTM_A549_MK2206_60min_R1 1 VDDSSEDKTEFTVK 14 1 P49588;P49588-2 P49588 AARS Alanine--tRNA ligase, cytoplasmic 1 VDDS(0.499)S(0.499)EDKT(0.002)EFTVK 73.11 0.00034954 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VDDSPSTSGGS(ph)SDGDQR ddPTM_A549_MK2206_60min_R1 2 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDSPSTSGGS(0.5)S(0.5)DGDQR;VDDSPST(0.001)S(0.001)GGS(0.499)S(0.499)DGDQR 167.55 1.0590999999999998e-29 39057000.0 856.8199999999999 740.9200000000001 505.98 747.13 1002.4000000000001 848.0699999999999 786.48 760.58 970.48 825.79 1127.6100000000001 True False 1001.4302687622273 778.6296632748082 577.7355723642394 930.1768835399397 854.9482878712507 937.8122044966947 929.3732356379846 868.3945441785614 750.6678295381059 639.2434654639367 847.5933165472045 1.1814985432420588 0.9186359166288264 0.6816188389943066 1.0974330087088835 1.008677476780973 1.1064412450973657 1.0964848559966502 1.0245415191758398 0.8856462349137689 0.7541865337824849 1.0 9.727228401573742 -5.253560584229862 23.962062741414435 0.9649738708851645 1.1814987356552953 0.18803801952412869 0.1330414092934663 665.0060908218176 2022418.788327881 0.016402534339882972 0.23864190208147987 5.577497904260088e-06 5.253560584229862 0.21652486477013078 VDDSPSTSGGSS(ph)DGDQR ddPTM_A549_PD325901_60min_R1 2 VDDSPSTSGGSSDGDQR 17 0 F8WF15;F8W8F0;C9J180;Q96LR5 F8WF15 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDSPSTSGGS(0.353)S(0.647)DGDQR;VDDSPSTSGGS(0.234)S(0.766)DGDQR 201.57 2.5718000000000002e-48 58498000.0 2378.6000000000004 2022.63 2499.3 2404.25 2371.3 2491.6 2190.32 1767.8600000000001 2354.0 2200.0 2365.3 True False 2620.0737209672275 2193.0841285206025 2668.917527511819 2552.75506205208 2204.7480685408973 2471.3092356873476 2273.6738261890937 1732.5986454406589 2255.06956625551 2061.0916245456506 2074.3830948720724 1.2630616434563684 1.0572223298299923 1.286607827700414 1.230609268057841 1.0628451774366512 1.1913465944629449 1.096072288580481 0.8352356176270846 1.087103713788499 0.9935925671785126 1.0 11.018466638810319 -7.994699112629025 9.94168755873255 1.0239376701803784 1.1750969488349894 0.4983874618475731 0.09100798047629595 0.11095846875881561 150.55185949688558 0.014079490682171878 0.019186855803032893 1.0122805383323531e-08 7.994699112629025 0.15115927865461098 VDDSS(ph)EDKTEFTVK ddPTM_A549_MK2206_60min_R1 1 VDDSSEDKTEFTVK 14 1 P49588;P49588-2 P49588 AARS Alanine--tRNA ligase, cytoplasmic 1 VDDS(0.17)S(0.83)EDKTEFTVK 111.77 2.3547e-06 14478000.0 4940.5 6668.6 6402.4 5974.4 7130.3 6346.3 6106.6 5823.7 8601.7 8885.8 8566.9 True False 5774.335616371912 7008.003256106439 7310.356592167288 7438.128268201011 6081.442315451292 7017.861253667004 7216.090174889278 6649.227309333255 6653.428684092336 6878.491608543875 6439.502295588236 0.8967052656115929 1.0882833694938954 1.1352362739548494 1.1550781297643056 0.9443963269673413 1.089814232766872 1.1205975001877226 1.032568512925091 1.0332209507325842 1.0681713108878608 1.0 12.65273347246872 -9.141950712439574 1.058434266540338 1.008809477814198 1.064520924876128 0.0 0.07667009978138768 0.8160296163915796 1.9021742621483966 0.017737506485578695 0.015632338033687018 7.211893214507615e-10 9.141950712439574 0.055711447061929986 VDDSSGS(ph)IGRR ddPTM_A549_MK2206_60min_R1 2 VDDSSGSIGRR 11 1 P41250 P41250 GARS Glycine--tRNA ligase 1 VDDSS(0.021)GS(0.979)IGRR;VDDSSGS(1)IGRR 133.15 2.8677000000000003e-08 21165700.0 1854.06 2436.45 2265.66 1823.17 3087.3 2691.2 1794.53 1870.21 2857.9 3543.3999999999996 3283.9 True False 2166.9800005850648 2560.4548980806367 2586.9646564740947 2269.8467318452117 2633.162259721581 2975.9809977260197 2120.5728722274343 2135.3179947779154 2210.590213128506 2742.9434790018227 2468.4169989707143 0.8778824653568083 1.03728620372826 1.0480257823345134 0.9195556232158898 1.0667412600138317 1.2056232796026565 0.8590821052973121 0.865055618912163 0.8955497446542795 1.111215600988642 1.0 11.269370419639195 VDDSSGS(ph)IGRR ddPTM_A549_PD325901_60min_R1 2 VDDSSGSIGRR 11 1 P41250 P41250 GARS Glycine--tRNA ligase 1 VDDS(0.001)S(0.031)GS(0.969)IGRR;VDDSS(0.032)GS(0.968)IGRR 102.9 9.2838e-05 26538000.0 2059.7 2310.8 2265.8 2279.87 2528.8 2030.32 2631.7 3105.0 2434.3 2638.8 3235.8 True False 2268.7992277290004 2505.5392257533067 2419.5708133622516 2420.692391939553 2351.185811886399 2013.7857470704512 2731.850783621496 3043.068339174622 2331.9948365062824 2472.185717659574 2837.817113426226 0.7994874711956951 0.8829107463969921 0.8526168941313463 0.8530121199448758 0.8285191461995607 0.7096249217551288 0.9626592110874994 1.0723271506036507 0.8217565626316061 0.871157519617179 1.0 11.47056590082063 -7.802227576735017 24.999992404996238 0.9311114824154624 0.8270711625224669 0.4052444567698441 0.07399997434778263 159.88757221757032 97998.08425359959 0.013572959241470726 0.018753847239778763 1.5767847946107238e-08 7.802227576735017 -0.10404031989299545 VDDSTGTVIS(ph)DVEEDAGELSR ddPTM_A549_MK2206_60min_R1 1 VDDSTGTVISDVEEDAGELSR 21 0 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 VDDSTGTVIS(1)DVEEDAGELSR 314.21 2.7384999999999994e-164 4133700.0 2566.7 2343.0 3063.4 2064.5 3374.2 2619.4 2656.3 2907.1 3350.3 3788.3 4263.0 True False 2999.896210209855 2462.2486922378594 3497.8361840005723 2570.302592678926 2877.859649775712 2896.5831693830023 3138.9153262958716 3319.1903276203625 2591.462399329731 2932.520398911384 3204.379447185404 0.9361863223922626 0.7684011000634142 1.0915798960928078 0.8021217945760372 0.898102018568215 0.903945121707494 0.9795704216780465 1.035829364882428 0.8087251968882667 0.9151601572926047 1.0 11.645829279524682 -7.543671326714556 24.661480265286635 0.9244042955046102 0.8976661348998523 0.033833798563659756 0.09513883533277637 1025.6419617062702 1216479.7667159282 0.01587212022584428 0.023543384574811397 2.8597539813157464e-08 7.543671326714556 -0.026738160604757977 VDDSTGTVIS(ph)DVEEDAGELSR ddPTM_A549_PD325901_60min_R1 2 VDDSTGTVISDVEEDAGELSR 21 0 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 VDDSTGTVIS(1)DVEEDAGELSR;VDDSTGTVIS(1)DVEEDAGELSR 398.92 0.0 70857000.0 12353.3 10865.900000000001 11185.3 11994.2 14469.3 12510.900000000001 12869.599999999999 12259.3 12052.7 12438.6 13090.3 True False 13607.39792198119 11781.607526879367 11944.401720672957 12735.054493195397 13453.026284375139 12409.015378375669 13359.359670515341 12014.778644265198 11546.166933393282 11653.224673215247 11480.276086248628 1.1852849025364889 1.0262477520894886 1.040428089963818 1.109298626402354 1.1718382191600358 1.0808986896438413 1.1636793026709111 1.0465583365766622 1.0057394828007298 1.0150648456245561 1.0 13.486869716987467 -8.518352908448938 4.378518845486715 1.003246985690324 1.106483923126369 0.4796664904688379 0.04813140778064553 0.12480500025598704 5.912630769653818 0.007934318746008633 0.009297045301965285 3.0314268403587322e-09 8.518352908448938 0.10323693743604512 VDEDS(ph)AEDT(ph)QSNDGKEVVEVGQK ddPTM_A549_PD325901_60min_R1 2 VDEDSAEDTQSNDGKEVVEVGQK 23 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 2 VDEDS(0.991)AEDT(0.543)QS(0.467)NDGKEVVEVGQK;VDEDS(0.999)AEDT(0.532)QS(0.468)NDGKEVVEVGQK 82.089 2.4193e-05 7897600.0 3144.3 3303.2 2985.3 3138.2 3430.1000000000004 2975.0 2723.2 3184.0 3137.6 3295.9 3174.3999999999996 True False 3463.5070212886826 3581.5722565814085 3187.9004100672296 3332.0394866306888 3189.181609202601 2950.772586358106 2826.8328661922174 3120.4926222003223 3005.7375832979114 3087.7963115181883 2783.968924179557 1.244089684768801 1.2864986478385019 1.1450919521333065 1.1968666236504957 1.1455521581091146 1.059915777338537 1.0153967027578417 1.1208791143816161 1.0796591719082176 1.109134618816972 1.0 11.442927391975788 -2.000000000000056 0.18873502467273545 1.001589791243618 2.283919522874373 0.6602671190492884 0.04982542026898147 15.895020368729774 0.1713891584631469 0.03937933549098481 5.995639483635616 0.009999999999998711 2.000000000000056 1.2823297316307551 VDEDS(ph)AEDTQSNDGKEVVEVGQK ddPTM_A549_MK2206_60min_R1 2 VDEDSAEDTQSNDGKEVVEVGQK 23 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 VDEDS(0.992)AEDT(0.007)QS(0.001)NDGKEVVEVGQK;VDEDS(0.683)AEDT(0.159)QS(0.159)NDGKEVVEVGQK 86.48 1.1897e-06 70779000.0 2508.2 2353.6 2233.17 2033.7 3655.5 2367.21 2843.0 3225.2 4523.9 3160.3 3541.2 True False 2931.522840397537 2473.388186961598 2549.8670859256245 2531.9565912962616 3117.7807924115696 2617.706590973177 3359.5362996119284 3682.381976760758 3499.243873183826 2446.3860350763275 2661.822307851972 1.1013217643228812 0.9292086025673006 0.9579403848273056 0.951211725826842 1.1712956132400685 0.9834264981743296 1.2621189211998887 1.3834063851288232 1.314604608602756 0.9190643672418929 1.0 11.378198550826546 -6.765878244290971 24.743799329205167 1.1671649540098794 0.9790140187810851 0.22758517250965127 0.14124344296111643 105.540086171532 588322.953962296 0.021987038613196508 0.04259534429340532 1.714437887739683e-07 6.765878244290971 -0.18815093522879434 VDEDS(ph)AEDTQSNDGKEVVEVGQK ddPTM_A549_PD325901_60min_R1 1 VDEDSAEDTQSNDGKEVVEVGQK 23 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 VDEDS(1)AEDTQSNDGKEVVEVGQK 189.86 1.5553e-50 50896000.0 3695.7 2780.4 2740.8 3407.3 3242.6 3299.0 2892.8 3142.1 2807.0 3125.2 3121.0 True False 4070.884743369453 3014.714065814648 2926.8071697692903 3617.761182460248 3014.8509623627147 3272.134037779965 3002.887087000901 3079.4283505702356 2689.0315516054447 2927.8743386500314 2737.1367856490674 1.4872785184552293 1.1014115486010532 1.069295179223294 1.321731965106141 1.1014615631084699 1.1954587198330433 1.097090617737913 1.1250546069585627 0.9824249798929157 1.0696850643347493 1.0 11.418451818395486 -2.000000000002961 0.17200796888306608 0.9505060216148631 2.492412526226587 0.42312097990996556 0.10645824673954969 31.71096939474819 0.32417557538463504 0.12135302840344973 12.754716626759171 0.009999999999931817 2.000000000002961 1.541906504611724 VDEDSAEDT(ph)QSNDGKEVVEVGQK ddPTM_A549_PD325901_60min_R1 1 VDEDSAEDTQSNDGKEVVEVGQK 23 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 VDEDS(0.161)AEDT(0.774)QS(0.065)NDGKEVVEVGQK 176.09 4.318199999999999e-41 46520000.0 2593.6 2603.1 2442.4 2274.8 3194.3 2429.4 2567.5 2539.8 2727.7 2791.6 2836.9 True False 2856.9003626925933 2822.4723725802437 2608.1559513443217 2415.309229554361 2969.943387736761 2409.615771865003 2665.2076174899075 2489.1416965654457 2613.064254832265 2615.3378995825638 2487.9792845907828 1.1482814106961063 1.1344436788767225 1.0483029209679715 0.9707915353288907 1.1937170884544768 0.968503149037003 1.0712338458751576 1.000467211275376 1.050275728184793 1.0511895801466564 1.0 11.280758758015423 -2.000000000000006 0.3443491843439362 1.0208901438363833 2.5247318921534108 0.27031291302249505 0.06044491919906936 44.50199945232365 0.5491509843999286 0.014813851766565406 43.89216811005444 0.009999999999999856 2.000000000000006 1.5038417483170274 VDEEPTTLPS(ph)GEAKPR ddPTM_A549_MK2206_60min_R1 1 VDEEPTTLPSGEAKPR 16 1 J3KP36;A0A096LPC5;Q9Y4E1-3;Q9Y4E1-6;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1;A0A0A0MR88;A0A0A0MT65;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2 J3KP36;F8W7U3 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 VDEEPT(0.001)T(0.007)LPS(0.992)GEAKPR 69.52199999999999 0.00046342 6054200.0 964.91 1166.4 1164.3 914.58 1415.1 1340.3 927.1 989.59 1754.7 1333.7 1358.2 True False 1127.7632182154484 1225.7647779027907 1329.4152474478901 1138.652141057056 1206.940664571634 1482.1296563808653 1095.5420694232223 1129.867412992273 1357.2632516801111 1032.416243705122 1020.9214555869617 1.104652284506118 1.200645525857871 1.3021719155501195 1.1153180637215692 1.1822071697746068 1.4517567911517146 1.073091434632803 1.1067133586125633 1.3294492384820882 1.0112592286656878 1.0 9.995656161657402 -11.01451296194245 1.2795624453882875 0.999185035337705 1.220074438225035 0.32795217153821954 0.11001885144130462 0.4148644745456202 1.2021836222047373 0.07994896668287849 0.01782012489078432 9.671348611359255e-12 11.01451296194245 0.22088940288733006 VDENMTASTYS(ph)LNKIPER ddPTM_A549_PD325901_60min_R1 1 VDENMTASTYSLNKIPER 18 1 Q9HCD6;Q9HCD6-2;Q9HCD6-3;Q9HCD6-4;J3KRP9 Q9HCD6 TANC2 Protein TANC2 1 VDENMTAS(0.025)T(0.402)YS(0.573)LNKIPER 81.477 6.4994e-05 5954800.0 3449.0 4131.4 3745.2 3482.9 4079.8 3377.8 4035.6 3687.9 4268.5 3675.1 3736.5 True False 3799.1399409803967 4479.567577149561 3999.371793717143 3698.0308227601895 3793.248922545925 3350.2923167060217 4189.176966365053 3614.3419413984193 4089.1097891085965 3443.0535588035086 3276.9341876250346 1.1593580229128226 1.366999555275212 1.220461432768565 1.1285032322972424 1.1575603003779245 1.0223862076199197 1.2783830026812861 1.1029644583792884 1.247846174192527 1.0506935329387463 1.0 11.678130983438267 -10.893619565924853 1.0154444289318718 0.994118240972445 1.190939850370962 0.3254926568754175 0.08891019953418498 0.48139294718154135 0.8366592123456886 0.07141680424882844 0.015120042373926683 1.277557435892321e-11 10.893619565924853 0.196821609398517 VDFGS(ph)SER ddPTM_A549_MK2206_60min_R1 1 VDFGSSER 8 0 A0A0C4DGE6;E9PNT2;E9PIR1;A0A0G2JRG8;A0A0G2JNY3;Q6ZUM4-2;Q6ZUM4-3;Q6ZUM4 A0A0C4DGE6 ARHGAP27 Rho GTPase-activating protein 27 1 VDFGS(0.972)S(0.028)ER 74.84100000000001 0.0049503 11473000.0 1622.4 1743.3 1146.3 1246.0 2124.4 1412.0 1468.1 1409.2 2010.0 2554.1 2350.3 True False 1896.2214561282847 1832.0265237636613 1308.862576783919 1551.270055935066 1811.903574175662 1561.4169027902574 1734.8347666057953 1608.958415494003 1554.7382093104382 1977.1270361005113 1766.6556450199064 1.0733395959046215 1.0370026150416078 0.7408702315437204 0.8780828682193957 1.0256121951571642 0.8838264022713174 0.9819880696592954 0.9107368603663979 0.8800459861508096 1.1191354929150517 1.0 10.78680514309334 -11.07802543236696 1.4204281742900997 0.9997253047269478 0.9255948330073328 0.14024152136455115 0.09674914195840655 0.9098319003054252 3.2974783872591638 0.06316861943046455 0.014133326240683034 8.355540865932732e-12 11.07802543236696 -0.07413047171961495 VDFGSS(ph)ER ddPTM_A549_MK2206_60min_R1 1 VDFGSSER 8 0 A0A0C4DGE6;E9PNT2;E9PIR1;A0A0G2JRG8;A0A0G2JNY3;Q6ZUM4-2;Q6ZUM4-3;Q6ZUM4 A0A0C4DGE6 ARHGAP27 Rho GTPase-activating protein 27 1 VDFGS(0.22)S(0.78)ER 103.55 0.0021314 11504000.0 1831.8 1775.7 1314.3 1831.1 1961.7 1623.9 1861.5 1449.6 2490.7 2404.1 2161.5 True False 2140.9630567898125 1866.075545372073 1500.6875029809858 2279.719582201203 1673.136528648277 1795.7400201424211 2199.710454353713 1655.0852392138138 1926.5604268305992 1861.0121402800353 1624.739895634824 1.317726648149603 1.148538021615425 0.9236478448106501 1.4031289490250765 1.02978731127578 1.1052476922410914 1.3538846804117126 1.018677047114137 1.185765445907172 1.1454215811897044 1.0 10.66599306045665 -10.884553952730188 0.6867975154192425 0.9755277211438893 1.1637930309098727 0.018379056468152077 0.147101068595117 1.5242895469583462 0.9935141851477045 0.17579389729467193 0.025674979289769032 1.3045058988239398e-11 10.884553952730188 0.18826530976598344 VDGANVALKDSDQVAQS(ph)DGEESPAAEEQLLGEHIK ddPTM_A549_PD325901_60min_R1 1 VDGANVALKDSDQVAQSDGEESPAAEEQLLGEHIK 35 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5 D6REX3 SEC31A Protein transport protein Sec31A 1 VDGANVALKDS(0.003)DQVAQS(0.873)DGEES(0.124)PAAEEQLLGEHIK 75.298 7.9617e-06 3102800.0 822.67 820.26 957.94 820.09 1238.6 1332.4 827.64 1006.2 1003.3 1082.6 927.17 True False 906.1868527823553 889.3861889027203 1022.9515689611779 870.7450967404756 1151.6050089380312 1321.549376155812 859.1362931019852 986.1305516513708 961.134790069733 1014.2444512423284 813.1339678148814 1.1144373358519668 1.093775717293855 1.2580357105362787 1.0708507222744752 1.4162549524683075 1.6252541751603184 1.056574103540066 1.212752868142232 1.182012839351148 1.2473276131458229 1.0 9.667349252751308 -10.007698758023725 0.6736346826802816 1.0066485275078683 1.2368412232213404 0.0 0.17409169238316083 0.8248020904777656 0.7464626265523354 0.09206522055542059 0.03647411045597933 9.82429154261977e-11 10.007698758023725 0.23019269571347212 VDGDS(ph)PESR ddPTM_A549_MK2206_60min_R1 2 VDGDSPESR 9 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 VDGDS(0.991)PES(0.009)R;VDGDS(1)PESR 112.13 0.0002917 10963600.0 1716.94 1500.28 1410.1 1574.49 678.8299999999999 368.11 454.42 492.15999999999997 451.66 2215.57 2146.72 True False 2006.7174968472004 1576.6378437860078 1610.0733835147896 1960.240120681541 578.9750062406632 407.06315586835797 536.9822318922451 561.925187176787 349.35973115281223 1715.0711982198084 1613.6301775420714 1.2436043430371952 0.9770750855611715 0.9977957811667234 1.2148013516129428 0.35880278783740577 0.2522654580545887 0.33277899692616814 0.3482366622770577 0.21650545212594324 1.0628650988866948 1.0 10.65609425475137 -6.7583018685810465 24.99550320397003 0.5328198194860693 1.091050094465373 0.5180781048132446 0.2767693898609332 65.99711443769816 525767.524204523 0.047797008866120066 0.09627869085523941 1.7446090918195989e-07 6.7583018685810465 0.5582302749793037 VDGDS(ph)PESR ddPTM_A549_PD325901_60min_R1 2 VDGDSPESR 9 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 VDGDS(0.863)PES(0.137)R;VDGDS(0.9)PES(0.1)R 88.681 0.0011117000000000002 23951000.0 1197.06 1031.08 1060.87 1166.42 1433.05 889.5999999999999 1157.54 1155.62 1095.8200000000002 1087.69 1293.36 True False 1318.5846499710033 1117.972730175574 1132.8670177295483 1238.467114267978 1332.3975117541145 882.3553925459399 1201.590818130192 1132.5702525336471 1049.7664962167005 1019.013067773664 1134.2849192845479 1.1624809847623672 0.9856189667766518 0.9987499599695868 1.091848347105896 1.1746585792523156 0.7778957275588986 1.0593377357852007 0.9984883280014141 0.9254874841136409 0.8983748707656347 1.0 10.147567358812452 -7.226925562696547 24.99750814318838 0.9629950648385285 1.0731270738236725 0.3752734130012503 0.08717189238891547 612.5918339773937 443685.4219075756 0.01202514537147086 0.0208275566878326 5.9302695963815025e-08 7.226925562696547 0.11013200898514397 VDGERERS(ph)PR ddPTM_A549_PD325901_60min_R1 4 VDGERERSPR 10 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VDGERERS(1)PR;VDGERERS(1)PR;VDGERERS(1)PR;VDGERERS(1)PR 61.532 0.0024537 111866400.0 3133.13 3381.76 2599.4599999999996 3652.91 3253.0199999999995 4154.2 3530.22 4026.28 4150.67 3444.51 4422.63 True False 3451.203051111601 3666.752783487753 2775.8749874228247 3878.5419543394664 3024.5390975097653 4120.369572520621 3664.564453910509 3945.9726868444427 3976.2317742437344 3227.0230507562474 3878.6745473614637 0.8897892847079274 0.9453623238335698 0.7156761810065148 0.9999658148626861 0.7797867700880603 1.0623138193751198 0.9447981286296354 1.0173508085458627 1.0251522074592816 0.8319911896066366 1.0 11.921348011651345 -7.270982562291542 24.999137380368985 1.0101724367655422 0.8695969676795484 0.24257400194848366 0.092452508094669 416.16195262398656 1090168.6348963347 0.009948118384182575 0.016024711972110584 5.358181711495232e-08 7.270982562291542 -0.14057546908599383 VDGET(ph)ASDSESR ddPTM_A549_MK2206_60min_R1 2 VDGETASDSESR 12 0 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.495)AS(0.495)DS(0.008)ES(0.001)R;VDGET(0.537)AS(0.453)DS(0.009)ES(0.001)R 54.7 0.021238999999999997 7016210.0 243.92 307.1 161.73 216.82 207.35 300.61 378.48 171.73 190.06 344.84 558.55 True False 285.0877327285574 322.730078269845 184.66574591578402 269.9409097334196 176.84908967488408 332.42035067123174 447.2449168755268 196.073253401068 147.01171346345356 266.94040449821875 419.846619804224 0.6790282910018303 0.768685665303999 0.4398409733580666 0.6429512517197209 0.42122308798710695 0.7917661712418705 1.0652578722298127 0.46701162794283696 0.3501557629117168 0.6358045817367638 1.0 8.71371856227913 -7.298753820360404 24.72920566991043 0.7043162420471338 0.5948144964755077 0.07904812784999327 0.21438778117354407 1649.2854291773272 1093018.895578233 0.042188205807740006 0.067443521561051 5.026274229236311e-08 7.298753820360404 -0.10950174557162617 VDGET(ph)ASDSESR ddPTM_A549_PD325901_60min_R1 5 VDGETASDSESR 12 0 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.5)AS(0.5)DSESR;VDGET(0.475)AS(0.475)DS(0.045)ES(0.004)R;VDGET(0.567)AS(0.368)DS(0.064)ES(0.001)R;VDGET(0.477)AS(0.477)DS(0.031)ES(0.016)R;VDGET(0.639)AS(0.36)DS(0.001)ESR 83.314 0.00061002 19519900.0 2441.0 2531.5699999999997 2191.56 2598.27 2773.09 2201.52 1700.1599999999999 2422.84 2571.33 2924.48 2862.75 True False 2688.808523030775 2744.914288445687 2340.292440520866 2758.759236800689 2578.317725041149 2183.59155103163 1764.860519163249 2374.5145555187905 2463.265942140941 2739.8278337051192 2510.6498984674354 1.0709611581734644 1.0933082665652636 0.932146071799752 1.0988227544129932 1.026952314862785 0.8697315991228207 0.7029496706173827 0.9457768512321271 0.9811268164647653 1.091282315139829 1.0 11.29384514841299 -7.025524724734766 22.50591421314059 0.9552213355426072 1.0460590253890216 0.22216784265149114 0.10038121802428389 311.69564169008225 274831.9479399358 0.015027400226721126 0.026121769378092918 9.429209286836297e-08 7.025524724734766 0.09083768984641438 VDGETAS(ph)DSESR ddPTM_A549_MK2206_60min_R1 3 VDGETASDSESR 12 0 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.119)AS(0.87)DS(0.011)ESR;VDGET(0.001)AS(0.944)DS(0.054)ESR;VDGET(0.001)AS(0.839)DS(0.159)ESR 266.28 1.0098999999999998e-76 530520800.0 12785.48 10224.62 8694.38 9052.779999999999 12199.099999999999 11782.539999999999 10266.890000000001 13598.08 9328.85 12401.41 12611.16 True False 14943.356449025552 10745.009485116972 9927.373820412251 11270.71150639473 10404.628550050045 13029.360562182947 12132.251016223257 15525.64948237347 7215.880370112279 9599.922867846693 9479.46092169052 1.5763930641702175 1.1335042755997524 1.0472508829797311 1.1889612288611837 1.0975970718168788 1.3744832823108843 1.2798460921404013 1.6378198729474487 0.761212101587042 1.012707678965218 1.0 13.210589302887184 -8.787057979545043 24.999975326525718 0.887239020501875 1.2709738147121017 0.4244619294354153 0.1879859751468985 144.76625656688358 141269.82785755506 0.0333621710078306 0.03552293007332351 1.6328339453800681e-09 8.787057979545043 0.3837347942102267 VDGETAS(ph)DSESR ddPTM_A549_PD325901_60min_R1 3 VDGETASDSESR 12 0 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.002)AS(0.499)DS(0.499)ESR;VDGET(0.004)AS(0.958)DS(0.039)ESR;VDGET(0.163)AS(0.833)DS(0.004)ESR 185.57 2.8546999999999995e-19 688029800.0 5866.79 5430.32 5787.95 5694.64 6327.290000000001 4482.610000000001 5300.26 4706.82 5405.7699999999995 5801.8 5434.24 True False 6462.382201897473 5887.952124109696 6180.755092770789 6046.384979334199 5882.882978365507 4446.1051103646105 5501.964294713561 4612.938782671142 5178.584285971554 5435.473357858618 4765.862930485608 1.3559731566260136 1.2354430267909018 1.2968805823672762 1.268686294072271 1.234379390295659 0.9329066268197487 1.1544529028561359 0.9679126004996362 1.0865995018123387 1.1405014028183103 1.0 12.218521743879664 -7.116431966962142 5.28061483372404 1.0387460631669676 1.2821672849152417 0.7384563075031436 0.06885018787192806 0.07477682095307071 2.974261467469563 0.008676627530227951 0.015240010897063807 7.648354919563613e-08 7.116431966962142 0.24342122174827407 VDGETAS(ph)DSESRAESAPLPVSADDTPEVLNR ddPTM_A549_MK2206_60min_R1 2 VDGETASDSESRAESAPLPVSADDTPEVLNR 31 1 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.005)AS(0.975)DS(0.02)ESRAESAPLPVSADDTPEVLNR;VDGET(0.003)AS(0.859)DS(0.132)ES(0.005)RAESAPLPVSADDTPEVLNR 340.42 3.3431999999999984e-248 200743000.0 7862.9 9342.5 8433.400000000001 7770.099999999999 10900.0 7666.0 7896.5 6401.599999999999 12241.900000000001 13989.1 12206.5 True False 9189.965290551709 9817.993344956121 9629.382932085415 9673.774848813046 9296.624439142684 8477.211031721039 9331.1918360484 7309.046404077782 9469.129196297232 10828.952594148099 9175.289167738365 1.001599527006184 1.0700472939291763 1.0494909485734476 1.0543291521347826 1.013224135957584 0.9239175874181853 1.0169915809147696 0.7966012046549377 1.0320251518166916 1.1802301154958965 1.0 13.1635379112052 -6.950598257190926 5.820751613854832 0.9908560008158573 1.04529622080232 0.0726511018993986 0.08695997010221358 0.33234285571304534 25.565426935545677 0.009868085483366651 0.018741564559835777 1.1204738952326485e-07 6.950598257190926 0.054440219986462646 VDGETAS(ph)DSESRAESAPLPVSADDTPEVLNR ddPTM_A549_PD325901_60min_R1 2 VDGETASDSESRAESAPLPVSADDTPEVLNR 31 1 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.007)AS(0.989)DS(0.004)ESRAESAPLPVSADDTPEVLNR;VDGET(0.01)AS(0.963)DS(0.026)ES(0.001)RAESAPLPVSADDTPEVLNR 326.29 1.3000999999999993e-225 366900000.0 5713.5 6474.799999999999 5908.7 5576.5 7038.1 6596.1 6534.3 6728.5 6460.2 6080.3 7662.0 True False 6293.530313943601 7020.454119312572 6309.6999138995225 5920.947739849605 6543.768136126886 6542.383548529988 6782.966362206157 6594.294789093859 6188.7002599506495 5696.388820329513 6719.622573419781 0.9365898523584293 1.0447691135336625 0.9389961779785441 0.8811429027681669 0.9738297150812448 0.9736236636874693 1.009426688492437 0.981348984566236 0.9209892657410174 0.8477245199547689 1.0 12.714164486900154 VDGIPNDS(ph)SDSEMEDK ddPTM_A549_MK2206_60min_R1 3 VDGIPNDSSDSEMEDK 16 0 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.485)S(0.485)DS(0.03)EMEDK;VDGIPNDS(0.452)S(0.452)DS(0.097)EMEDK;VDGIPNDS(0.496)S(0.496)DS(0.009)EMEDK 74.678 0.0005357000000000001 6459400.0 3356.94 3751.9 2812.33 3209.2 4405.9 3218.3 2610.92 3719.31 5481.7 4866.0 4740.3 True False 3923.5094026967977 3942.8556843394044 3211.1606826892776 3995.4541440664625 3757.797946460438 3558.858369865359 3085.290367704108 4246.533582409169 4240.10370247613 3766.7672204162286 3563.152684375549 1.101134234269953 1.1065637747236754 0.9012133262686836 1.121325550147362 1.0546272583093086 0.9987947991875227 0.8658877800081735 1.1917910790155724 1.1899865310484774 1.0571444880634868 1.0 11.798938590269652 -8.309094677227591 24.99993789786541 1.0998782440696442 1.0242750781918457 0.17394329696791122 0.09158610329385068 711.7503163146639 373381.7836063292 0.01716634995757341 0.020753112105450607 4.9080086873508685e-09 8.309094677227591 -0.07560316587779847 VDGIPNDS(ph)SDSEMEDKTTANLAALK ddPTM_A549_MK2206_60min_R1 3 VDGIPNDSSDSEMEDKTTANLAALK 25 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.505)S(0.438)DS(0.053)EMEDKT(0.001)T(0.002)ANLAALK;VDGIPNDS(0.447)S(0.447)DS(0.093)EMEDKT(0.007)T(0.006)ANLAALK;VDGIPNDS(0.492)S(0.492)DS(0.017)EMEDKTTANLAALK 84.035 4.3151000000000003e-07 23987800.0 3145.73 3559.3 3212.06 2898.6899999999996 4540.1 3394.4000000000005 2796.6000000000004 3030.24 4958.9 4437.9 4086.1000000000004 True False 3676.6523182855212 3740.4531670005194 3667.5784073842397 3608.8691801271366 3872.2573042341037 3753.5931549796373 3304.7060202232597 3459.7857997207966 3835.717067736083 3435.375307744592 3071.408599377032 1.1970573758995302 1.2178298803223995 1.1941030601164977 1.1749883036920314 1.2607431342803124 1.222108043762387 1.0759577937281113 1.1264492130491979 1.2488462357349897 1.1185015593305896 1.0 11.584684736110592 -10.899761452373916 0.9670261668031773 0.9910586432715435 1.1937661026126367 0.3609027842407003 0.060492176788826506 0.3157902985888557 0.48453699348153106 0.047356099298722566 0.009440711999752341 1.2596170995166626e-11 10.899761452373916 0.20270745934109324 VDGIPNDS(ph)SDSEMEDKTTANLAALK ddPTM_A549_PD325901_60min_R1 2 VDGIPNDSSDSEMEDKTTANLAALK 25 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.496)S(0.496)DS(0.007)EMEDKTTANLAALK;VDGIPNDS(0.433)S(0.433)DS(0.133)EMEDKT(0.001)T(0.001)ANLAALK 79.365 9.3682e-07 26335500.0 5183.1 4792.9 5007.1 4930.1 5794.0 5545.8 5136.6 6208.9 5855.7 5980.200000000001 6052.3 True False 5709.284496403449 5196.814503684013 5346.911916138289 5234.621079930522 5387.049428214883 5500.63684350413 5332.076123855374 6085.058618712176 5609.605292745275 5602.609151412682 5307.905468690755 1.0756190987349477 0.9790706587255513 1.0073487456921788 0.9861933508061685 1.014910581959488 1.0363102500506503 1.0045537086723177 1.1464142785898397 1.0568397131098375 1.0555216524597637 1.0 12.37392696187632 -7.205272326244986 3.782178901708109 1.0362486075733326 1.008465783751938 0.11017162593130314 0.043830194006614864 0.5394376894999834 15.781097051552875 0.006938420904640544 0.012189373662401824 6.23343842439008e-08 7.205272326244986 -0.02778282382139463 VDGIPNDSS(ph)DSEMEDKTTANLAALK ddPTM_A549_PD325901_60min_R1 1 VDGIPNDSSDSEMEDKTTANLAALK 25 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.18)S(0.758)DS(0.062)EMEDKTTANLAALK 128.71 3.7769e-24 15024000.0 4323.0 3891.0 4355.2 5394.8 5567.2 4381.6 4851.2 4892.8 5251.3 4596.5 5181.5 True False 4761.867777575605 4218.908225465687 4650.770061945132 5728.024543520248 5176.1790777973565 4345.917702314848 5035.815070678497 4795.209265672656 5030.60612288766 4306.2762055564 4544.208348234742 1.04789820638955 0.9284143468255759 1.0234500061494287 1.2605109855373104 1.1390716888692203 0.9563640945299257 1.108183138793521 1.0552353453457783 1.1070368560107648 0.9476405735730031 1.0 12.149813267408334 -10.990944623694059 1.261255122082747 0.999934954287333 1.0729976470066165 0.1363800698013261 0.08686161435373473 1.0032600914844823 2.835744884924233 0.0628274054987498 0.01432666429181408 1.0210696706294852e-11 10.990944623694059 0.07306269271928345 VDGPRS(ph)PS(ph)YGR ddPTM_A549_MK2206_60min_R1 2 VDGPRSPSYGR 11 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 VDGPRS(0.998)PS(0.987)Y(0.015)GR;VDGPRS(0.995)PS(0.971)Y(0.033)GR 55.841 0.004737300000000001 30064000.0 3508.1000000000004 2728.8 2664.3999999999996 1760.26 4174.5 3248.7 2446.3 2725.3999999999996 3924.8999999999996 3600.6 3839.5 True False 4100.18151518962 2867.684264352824 3042.2519842825377 2191.5237790210745 3560.43657992671 3592.4752776874698 2890.7610445799037 3111.7337961874487 3035.916416777382 2787.2219592746974 2886.0461851907953 1.4206915801378828 0.9936376898844543 1.054124497346329 0.7593515967507616 1.2336727659440871 1.2447740081643817 1.0016336742680356 1.0781995839687968 1.0519292561413667 0.96575791945978 1.0 11.494878672021542 VDGPRS(ph)PS(ph)YGR ddPTM_A549_PD325901_60min_R1 1 VDGPRSPSYGR 11 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 VDGPRS(0.989)PS(0.989)Y(0.022)GR 56.648 0.004293 26176000.0 2483.7 2275.6 2732.0 2631.6 3165.8 2150.2 2911.3 2618.2 2881.3 2820.7 3055.3 True False 2735.843395596697 2467.372798218895 2917.4099488505913 2794.1479552027663 2943.4451294171 2132.6894840965383 3022.091114624487 2565.9779470618346 2760.2089809906524 2642.6005206163254 2679.5174691424513 1.0210209215289319 0.9208272857457985 1.0887818357027823 1.0427802719632955 1.098498204738003 0.795922963241244 1.1278490061838158 0.9576268774553077 1.0301141951032047 0.9862225385908976 1.0 11.387757506407516 -11.38717615484667 2.1136851774241237 0.9998817462265573 1.012572320771719 0.0025414097523945856 0.088599449904546 3.7694027325494073 30.447881632537722 0.0636423697969535 0.011766442426729865 4.1003775321421526e-12 11.38717615484667 0.012690574545161648 VDGPRS(ph)PSYGR ddPTM_A549_MK2206_60min_R1 6 VDGPRSPSYGR 11 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 VDGPRS(0.996)PS(0.004)YGR;VDGPRS(0.987)PS(0.013)YGR;VDGPRS(0.969)PS(0.031)YGR;VDGPRS(0.994)PS(0.006)YGR;VDGPRS(0.673)PS(0.327)YGR;VDGPRS(0.976)PS(0.023)Y(0.001)GR 128.15 3.1998e-08 1336184700.0 24217.7 23285.9 21851.2 18085.64 24066.500000000004 19158.5 19284.8 20434.28 25721.199999999997 31126.8 33556.8 True False 28305.0556940816 24471.052847879466 24950.028734031916 22516.622611895244 20526.349730699774 21185.839753616958 22788.598533505505 23330.901767357915 19895.389268316238 24095.23426149854 25223.72043943496 1.1221602206560002 0.9701603261357603 0.9891494315416233 0.8926765052744788 0.8137716947817388 0.8399173232389164 0.9034590511032478 0.9249587832761658 0.7887571270894531 0.9552609147946257 1.0 14.622493465035545 -5.222377204808294 1.0737023298420116 0.8905220042954033 1.2396345803434226 0.5464337986176423 0.06131974997106956 1.4235886645868858 1.2170505555389888 0.012066260450872585 0.5750713830105546 5.992703561817248e-06 5.222377204808294 0.34911257604801926 VDGPRS(ph)PSYGR ddPTM_A549_PD325901_60min_R1 6 VDGPRSPSYGR 11 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 VDGPRS(0.947)PS(0.053)YGR;VDGPRS(0.997)PS(0.003)YGR;VDGPRS(0.999)PS(0.001)YGR;VDGPRS(0.999)PS(0.001)YGR;VDGPRS(0.916)PS(0.082)Y(0.001)GR;VDGPRS(0.78)PS(0.21)Y(0.01)GR 145.08 1.8718e-11 2205252600.0 53000.600000000006 49942.700000000004 50692.0 44539.5 57013.0 46077.6 46692.6 45832.9 47452.0 51294.49999999999 54529.19999999999 True False 58381.181895020476 54151.546602920906 54132.26395575923 47290.60375845628 53008.60356417246 45702.35930257961 48469.51244417108 44918.72685428552 45457.757458775 48055.75651602584 47822.4540890788 1.2207901707903563 1.1323456237116756 1.1319424104611435 0.9888786483096028 1.1084459083892564 0.955667377869189 1.013530429740954 0.9392810910668761 0.9505525871612719 1.0048785122259194 1.0 15.545400545803485 -5.649880406741948 0.586080334918149 0.9737184642350094 1.3063811382826664 0.7674016416938624 0.0425823255043657 0.7802427978753892 0.23491913773971176 0.007224057641489957 0.1596864399040224 2.2393377082764223e-06 5.649880406741948 0.33266267404765704 VDHGAEIITQS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 VDHGAEIITQSPGR 14 0 A0A669KB77;P11137-3;P11137;P11137-2;P11137-4 A0A669KB77;P11137-4 MAP2 Microtubule-associated protein 2 1 VDHGAEIIT(0.002)QS(0.998)PGR;VDHGAEIIT(0.005)QS(0.995)PGR 117.07 1.0502e-06 38176000.0 1631.28 2226.4 1583.28 1360.94 2302.5 1958.2400000000002 1685.63 1993.83 2792.25 2399.7 2431.01 True False 1906.6001830331293 2339.714250276726 1807.812911602934 1694.3703610949183 1963.8053001033068 2165.45965702549 1991.8871518518663 2276.4615083482886 2159.8098333069993 1857.6061033359679 1827.323124537225 1.0433842583347055 1.2804053201424161 0.9893230635171696 0.927241787915327 1.0746896778864143 1.1850447400067237 1.0900574316084997 1.2457903464253532 1.1819528819534735 1.0165723173926406 1.0 10.835516052151686 -7.017407390515604 24.661736576413 1.1086682326700614 1.0620452047783637 0.06310224277841192 0.10537083045753126 2043.9028434483828 2895680.909171661 0.017104596230446276 0.030056903323916362 9.607106596570943e-08 7.017407390515604 -0.0466230278916977 VDIAEGR ddPTM_A549_MK2206_60min_R1 1 VDIAEGR 7 0 Q15056;Q15056-2 Q15056 EIF4H Eukaryotic translation initiation factor 4H 0 71.342 0.019134 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VDIDAPDVDVHGPDWHLK ddPTM_A549_MK2206_60min_R1 2 VDIDAPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 51.606 0.015581999999999999 2677800.0 367.35 606.08 395.98 418.70000000000005 594.9100000000001 456.14 334.33 425.52 561.98 613.19 467.62 False True 429.34969915478626 636.9268832230136 452.13591830663546 521.281518796157 507.39952707251143 504.40843203877324 395.07343336238364 485.83876310034634 434.6924272976515 474.66995312104933 351.4970483445553 1.2214887754446115 1.812040488597974 1.286314978848496 1.4830324216127422 1.4435385146538486 1.4350289267417302 1.1239736869002455 1.382198699501176 1.23668869865315 1.3504237243430666 1.0 8.457368764260154 -9.208531552985395 0.25218999246624196 0.9055769208401387 1.5441257487923148 0.13849346636881177 0.18870576760030083 1.1231360430484496 0.2219240956651228 0.2639951863594739 0.16457128125963144 6.18683376448588e-10 9.208531552985395 0.638548827952176 VDIDAPDVDVHGPDWHLK ddPTM_A549_PD325901_60min_R1 2 VDIDAPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 124.92 1.0199e-10 7203800.0 1312.23 1149.44 970.37 1150.75 1227.9 1192.1399999999999 1137.18 978.9200000000001 1293.6799999999998 1228.9 1614.26 False True 1445.4466235873306 1246.3073427600314 1036.22514350884 1221.8292139571297 1141.656540025035 1182.4316070927575 1180.4560071887731 959.3946726521161 1239.3111284933848 1151.3070442746136 1415.7162536372518 1.0210002321253964 0.880336959866092 0.731944088970212 0.8630466810125346 0.8064162130595705 0.8352179358362664 0.8338224585300557 0.6776744069916861 0.8753951403110278 0.8132329068884254 1.0 10.467316425442595 -9.914746032048848 1.0125740730184696 0.9828435207975281 0.8312058210669995 0.0 0.09760205694948339 0.3738894238963204 0.7801441914140982 0.02855095687250162 0.016126210771470542 1.2168974133142286e-10 9.914746032048848 -0.15163769973052865 VDIDAPDVS(ph)IEGPDAK ddPTM_A549_PD325901_60min_R1 1 VDIDAPDVSIEGPDAK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDAPDVS(1)IEGPDAK 107.34 7.283e-07 2127600.0 1378.3 1467.8 1064.5 1345.9 1384.4 1150.9 1632.5 1234.0 1363.1 1589.3 1831.6 True False 1518.2240013491673 1591.4966572445487 1136.743371358513 1429.0331862393236 1287.164519920726 1141.527451979679 1694.6256808382775 1209.386901945727 1305.8136473079364 1488.9513267683653 1606.3248114690255 0.9451538010925152 0.9907688942369532 0.7076671936100719 0.8896290314612247 0.8013102398285069 0.7106454708470341 1.0549707436122453 0.7528906316523316 0.812920050779603 0.9269304166488476 1.0 10.64954793126246 -10.807178351441832 1.0267743101539406 1.0010083181444651 0.8483287773272504 0.1240806466151505 0.10869222225403885 0.6538612486499699 1.2111365750376872 0.07280917979801058 0.017675824335162793 1.5589121738718875e-11 10.807178351441832 -0.1526795408172147 VDIDT(ph)PDIDIHGPEGK ddPTM_A549_MK2206_60min_R1 2 VDIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK 175.33 2.752e-28 145394000.0 6616.3 7042.2 6785.3 5983.1 10073.0 7721.900000000001 6823.6 7952.6 10192.7 9961.8 9758.7 True False 7732.969686995548 7400.617900331818 7747.55756979144 7448.959768591566 8591.275043622412 8539.02633261763 8063.359793890952 9079.905403816076 7884.069724397261 7711.422461229429 7335.345463581565 1.0542066117251194 1.0088983452891642 1.0561953228046888 1.0154886099876375 1.1712161460256059 1.1640932761806633 1.0992474497518656 1.2378292813741194 1.074805510325314 1.0512691596483092 1.0 12.840649196962868 -4.3986062206649565 15.102130415243156 1.066486078581861 1.0768280580598857 0.0 0.07496804933693683 0.0 0.0 0.010928498237549473 0.0 3.993868664751862e-05 4.3986062206649565 0.010341979478024621 VDIDT(ph)PDIDIHGPEGK ddPTM_A549_PD325901_60min_R1 3 VDIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK 190.23 1.6900999999999998e-34 330148000.0 16008.900000000001 17142.1 18668.199999999997 17112.9 20411.2 16082.2 17892.8 14193.1 14268.199999999999 14404.3 15552.0 True False 17634.11174287071 18586.724927205185 19935.13631300608 18169.924966784238 18977.587726817328 15951.231895236424 18573.72029531586 13910.007486228447 13668.557173002055 13494.810039746788 13639.202592250644 1.2928990257018285 1.3627427851072147 1.4616057044517092 1.3321838167509739 1.3914000909114572 1.169513524514945 1.3617893106059478 1.0198548919664605 1.0021522211839635 0.9894134168381739 1.0 13.735471680082055 -8.275822020373711 7.622984813666724 1.0022052711996174 1.3399072190861927 0.8512239452426613 0.06757717448917434 0.044489514705485074 16.20354073114745 0.010894062015747814 0.013417353634752409 5.298805514644551e-09 8.275822020373711 0.33770194788657526 VDIDT(ph)PDINIEGSEGK ddPTM_A549_MK2206_60min_R1 2 VDIDTPDINIEGSEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDINIEGSEGK;VDIDT(0.993)PDINIEGS(0.007)EGK 176.04 2.855e-28 60499000.0 5365.6 6246.299999999999 5676.1 4697.9 8344.8 5551.799999999999 5537.1 6025.0 7622.2 8155.7 8073.5 True False 6271.182103674761 6564.209989895579 6481.056330876038 5848.885710896746 7117.290974289719 6139.287791013418 6543.119396616676 6879.06220078865 5895.783870152248 6313.321705620351 6068.627132735486 1.0333773959923571 1.0816630922151753 1.0679608730475167 0.9637905877173756 1.172800835941545 1.0116435985820869 1.0781877438674186 1.1335450424497993 0.9715185562067433 1.0403212402958373 1.0 12.56715446624848 -8.7880025778926 24.99959098486804 0.9865504161140439 1.0668318256455596 0.18995791285972186 0.05568652749868945 175.16888292245116 164856.97814462043 0.008596679048585035 0.009153078251516853 1.6292863614652191e-09 8.7880025778926 0.08028140953151564 VDIDT(ph)PDINIEGSEGK ddPTM_A549_PD325901_60min_R1 4 VDIDTPDINIEGSEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK 292.35 3.640799999999999e-124 177589000.0 34958.22 37902.27 35982.79 37324.12 43970.52 35828.32 36341.490000000005 33388.979999999996 31270.129999999997 29922.16 31330.95 True False 38507.152759518605 41096.42731092813 38424.798511494024 39629.54612317324 40882.18236525908 35536.546040761634 37724.485288776385 32723.010600751895 29955.95518090627 28032.869711052223 27477.441773255876 1.4014096755178307 1.4956424127855954 1.3984125170230854 1.442257487076004 1.487845291516556 1.2932989298643436 1.3729256748164262 1.1909045562095084 1.0902017526996548 1.020213961051387 1.0 14.745960071011101 -8.375506421643463 0.8480541468821077 1.0232871520556555 1.446471422460365 0.9290483068832924 0.046987459488540835 0.0843948867467935 0.12063496412554672 0.009923228183648047 0.0125562254249853 4.2120505860975146e-09 8.375506421643463 0.4231842704047095 VDIDVPDVNIEGPDAK ddPTM_A549_MK2206_60min_R1 2 VDIDVPDVNIEGPDAK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 112.43 8.442299999999999e-07 2231100.0 2013.7 2343.1 1891.94 1936.9699999999998 3226.5 2506.3999999999996 2248.2 2225.8900000000003 3049.3 3110.3999999999996 3170.0 False True 2353.563329761789 2462.3537818107234 2160.2455408885694 2411.5277369538867 2751.8861241187064 2771.6255843863323 2656.668838827837 2541.4167240022334 2358.638418731502 2407.758479733382 2382.801512450793 0.987729492978653 1.033386024368479 0.9065990304272902 1.0120556514476726 1.1548952398004386 1.1631793793582164 1.1149350144970163 1.0665666908144185 0.9898593762035856 1.01047379194288 1.0 11.218443064587515 -3.541044422873657 12.900845608218791 1.0233400232743912 0.6868952474718779 0.0 0.07632233468926644 0.0 0.0 0.011015603962837182 0.0 0.0002877104108050969 3.541044422873657 -0.3364447758025133 VDIDVPDVNIEGPDAK ddPTM_A549_PD325901_60min_R1 1 VDIDVPDVNIEGPDAK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 150.11 2.8058999999999996e-14 1576200.0 1520.6 1976.8 2375.7 2377.8 2255.4 2233.2 2269.1 1990.4 2141.3 2529.0 2442.3 False True 1674.970192593445 2143.3918735802044 2536.929288244637 2524.671305624386 2096.9884847076023 2215.0135596151003 2355.4518421991625 1950.6999105614059 2051.3086075713354 2369.3185083981602 2141.9125830152875 0.7819974567941974 1.000690640027351 1.184422421513236 1.17869950699401 0.979026175641378 1.0341288328849092 1.09969559956703 0.9107280689370146 0.9576994989606887 1.1061695641484774 1.0 11.064683885840891 -8.25735323475708 24.955739451501096 0.9742693801618549 1.0443442086009227 0.02046823298314282 0.11209211615710034 672.1262004648912 4104959.758091858 0.017105838758316127 0.021689115323041453 5.5290022317967865e-09 8.25735323475708 0.07007482843906776 VDIDVPDVNIEGPEGK ddPTM_A549_PD325901_60min_R1 1 VDIDVPDVNIEGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 129.71 1.3665e-09 2168200.0 1791.0 1651.6 1963.1 1577.9 1803.1 2538.0 1601.0 1789.0 2371.2 1816.7 2276.0 False True 1972.8210015354864 1790.7861282907043 2096.327771079283 1675.3632993290948 1676.4564763573094 2517.331369471218 1661.9269311008156 1753.31699155665 2271.546710070121 1701.9932519600377 1996.0664287527309 0.9883543819572329 0.8971575807773599 1.050229461746522 0.8393324366343701 0.8398801022894142 1.2611460887322303 0.8326010132534983 0.8783860929178764 1.138011579849839 0.8526736522609376 1.0 10.962944018782856 -8.760887627844715 24.999759817877237 1.0651721329048953 0.9493869413738739 0.0 0.13787405159266253 20.36717089747038 922833.4510675861 0.02094571211050652 0.023054635917033498 1.7342526714267616e-09 8.760887627844715 -0.1157851915310214 VDIET(ph)PNLEGTLTGPR ddPTM_A549_MK2206_60min_R1 2 VDIETPNLEGTLTGPR 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIET(0.403)PNLEGT(0.298)LT(0.298)GPR;VDIET(0.623)PNLEGT(0.198)LT(0.179)GPR 84.75299999999999 0.00010763 4072300.0 3140.3 3348.6000000000004 2985.7 2880.2 4116.6 3201.3 3313.8 3671.4 4717.4 4507.6 4477.1 True False 3670.3058670362743 3519.0294369729804 3409.117155634429 3585.849129297093 3511.053593227044 3540.059441149043 3915.8745654780196 4191.832193190946 3648.916432139831 3489.330029335841 3365.3125083260097 1.0906285398326874 1.0456768660463671 1.013016516950519 1.0655322857611176 1.0433068502673857 1.0519259154657101 1.1635990879865934 1.2455996828883116 1.0842726858537406 1.0368517101169665 1.0 11.71652476669768 -4.988443642124474 16.593495850156586 1.0624569782497233 1.134436819248667 0.0 0.0687660230550714 10009810.228368107 244391683.7746898 0.010571483457132668 16469998.22184327 1.0269666912607644e-05 4.988443642124474 0.07197984099894361 VDIETPNLEGT(ph)LTGPR ddPTM_A549_PD325901_60min_R1 2 VDIETPNLEGTLTGPR 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIET(0.009)PNLEGT(0.621)LT(0.369)GPR;VDIET(0.034)PNLEGT(0.835)LT(0.131)GPR 108.63 6.575799999999999e-07 8370600.0 6382.6 5702.4 5629.299999999999 5946.2 6804.5 5821.4 6226.200000000001 5832.2 5695.8 6917.5 7232.8 True False 7030.556853378217 6182.961260574538 6011.3381497308355 6313.483269199988 6326.575394250632 5773.992448479018 6463.141448107369 5715.872195727611 5456.425333678049 6480.727869452064 6343.211452496818 1.1083592129994098 0.9747367412985732 0.9476805549915334 0.9953133860475156 0.9973773445248088 0.9102632777922381 1.0189068260625844 0.9011006866999092 0.8601991868851051 1.0216793051887174 1.0 12.630997720224615 -2.0000000000006866 0.7198415853949224 0.9394397229989966 23.591485372421378 0.32847482692084573 0.05356371638437231 245.5136899682559 1.119208399449051 0.009535804947705348 8991.824550516634 0.009999999999984192 2.0000000000006866 22.65204564942238 VDINT(ph)PDVDVHGPDWHLK ddPTM_A549_MK2206_60min_R1 4 VDINTPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK 150.53 1.6903e-17 164974000.0 6052.5 6924.6 4633.85 5005.799999999999 9711.900000000001 7568.0 6658.2 5945.299999999999 10201.7 9598.6 8709.0 True False 7074.014030582129 7277.0325626420345 5290.999608680246 6232.221224718902 8283.292375276134 8368.840736768172 7867.908754863228 6788.0644817176335 7891.031238767311 7430.269593482784 6546.314943827743 1.0806100976323987 1.1116227412039281 0.8082409193692882 0.952019766570353 1.265336673587041 1.278404844340527 1.201883628022138 1.03692910285623 1.205415765431122 1.1350308772553765 1.0 12.676467296908562 -6.7273656914121105 24.99975892428936 1.1261993711187355 0.9840959357377902 0.33100085926663325 0.11120599635868218 229.2416853233285 168192.9359286925 0.018415890488356713 0.03833417074786887 1.873416360474237e-07 6.7273656914121105 -0.14210343538094528 VDINT(ph)PDVDVHGPDWHLK ddPTM_A549_PD325901_60min_R1 2 VDINTPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK 191.4 1.5235e-40 294620000.0 5134.8 5399.8 4717.4 5485.7 4397.9 5126.1 4670.5 3100.1 4046.6000000000004 4306.7 4403.700000000001 True False 5656.081115960031 5854.860096599749 5037.55113203067 5824.539230071372 4089.006675931348 5084.354741153036 4848.238433295667 3038.266073518598 3876.53547443056 4034.7742270139806 3862.0728173543052 1.4645195426001063 1.51598904875403 1.3043646172061614 1.508138117929492 1.0587596012061997 1.3164833967672442 1.2553461994579713 0.7866931094271672 1.0037447914009459 1.0447172846880666 1.0 11.915159650464265 -7.231145470375504 0.6970059198202334 0.9866489233263771 1.4796822067740685 0.6567111984076237 0.13516117288194535 0.30830279784547415 0.2870220175964559 0.024821328820971874 0.07118165640453526 5.872926012728787e-08 7.231145470375504 0.4930332834476914 VDKETNTET(ph)PAPS(ph)PTVVRPK ddPTM_A549_MK2206_60min_R1 2 VDKETNTETPAPSPTVVRPK 20 2 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 2 VDKET(0.031)NT(0.031)ET(0.938)PAPS(0.862)PT(0.138)VVRPK;VDKET(0.032)NT(0.155)ET(0.813)PAPS(0.839)PT(0.161)VVRPK 64.68 0.00088339 15313300.0 2423.4 2458.7 2577.1 3086.5 3073.0 2474.6 1956.99 2340.6 3696.7 3113.4 3466.4 True False 2832.4106735584846 2583.837328043201 2942.5715315622783 3842.692638558252 2620.9657707784836 2736.460529493462 2312.5497513111313 2672.387217786873 2859.403352416862 2410.0807776497927 2605.5972122269486 1.0870485508148373 0.9916487920382945 1.1293270954367214 1.4747838309490606 1.0058982863811095 1.0502239243473352 0.8875315572412069 1.0256332810176905 1.0974080487187008 0.9249629092095735 1.0 11.347398365945251 VDKETNTET(ph)PAPS(ph)PTVVRPK ddPTM_A549_PD325901_60min_R1 1 VDKETNTETPAPSPTVVRPK 20 2 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 2 VDKET(0.001)NT(0.025)ET(0.974)PAPS(0.5)PT(0.5)VVRPK 125.82 2.2035999999999998e-15 39128000.0 4916.6 5204.2 4897.9 5532.9 5753.0 6368.8 5272.6 6319.1 6049.8 6165.6 5584.1 True False 5415.729612590377 5642.776198141485 5230.300947465341 5874.654666872393 5348.92912677256 6316.934604368913 5473.25167827743 6193.060593261949 5795.547944746213 5776.302963772124 4897.291100526418 1.1058623025305216 1.1522239708264297 1.0679987854720596 1.1995722831834352 1.0922220094691932 1.2898834222229296 1.1176079930574478 1.2645890281254155 1.1834191241201162 1.1794894044896003 1.0 12.25776823868383 -10.66075068547224 0.9635970035346281 1.0014416959022232 1.164489044743202 0.0 0.08372863464424267 0.3741133250225225 0.6267969846032065 0.04089054682230309 0.011297693976363222 2.1839833067851845e-11 10.66075068547224 0.1630473488409787 VDKETNTET(ph)PAPSPT(ph)VVRPK ddPTM_A549_PD325901_60min_R1 1 VDKETNTETPAPSPTVVRPK 20 2 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 2 VDKET(0.009)NT(0.008)ET(0.982)PAPS(0.255)PT(0.746)VVRPK 100.7 5.6164e-10 37412000.0 4594.3 4714.0 4388.6 4996.4 5520.7 4793.1 5592.9 5998.3 4612.8 5857.1 6146.0 True False 5060.709953855101 5111.26532378444 4686.436786795649 5305.016280352296 5132.9450773810695 4754.066582747238 5805.740870052309 5878.659200924678 4418.9400574441 5487.2817064210585 5390.08096270399 0.9388931240313585 0.9482724580857355 0.8694557315971464 0.984218292277929 0.9522946154051969 0.8820028151047125 1.077115707579242 1.090643951658861 0.8198281413619607 1.018033262281149 1.0 12.396091228069237 -4.812950493723028 16.464180861320795 0.9380577778296699 1.9427210486273305 0.0 0.08372956040104486 45450.97140423338 2793650.393831455 0.01239889974029834 521833.63387409167 1.5383299882596682e-05 4.812950493723028 1.0046632707976606 VDKETNTET(ph)PAPSPTVVRPK ddPTM_A549_MK2206_60min_R1 1 VDKETNTETPAPSPTVVRPK 20 2 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 VDKET(0.055)NT(0.219)ET(0.723)PAPS(0.002)PT(0.001)VVRPK 41.763000000000005 0.027181 3198200.0 1206.4 1547.2 1368.1 1585.0 2163.1 1109.1 1339.9 1527.3 2764.8 2050.6 2510.2 True False 1410.0108263518016 1625.9458713744848 1562.117151965523 1973.3250711533533 1844.910855441243 1226.4642258390038 1583.3424860534735 1743.7994521600838 2138.5772144783573 1587.3680357964486 1886.8480620044093 0.7472837133764438 0.8617259142992326 0.8278976900270799 1.0458314640645092 0.9777739355872587 0.650006882131317 0.8391467855506499 0.9241864712242044 1.133412518762393 0.8412802640347091 1.0 10.881762539599361 -8.583380615738834 4.934822490937671 1.0626132268760426 0.855775339491547 0.14277014149771872 0.12224980671059997 0.14428748122921697 7.1499390817937565 0.018789395597212367 0.021427279259321256 2.6098730587358077e-09 8.583380615738834 -0.2068378873844956 VDKGVVPLAGTDGETTTQGLDGLSER ddPTM_A549_MK2206_60min_R1 1 VDKGVVPLAGTDGETTTQGLDGLSER 26 1 P09972;K7EKH5;C9J8F3;J3KSV6;J3QKP5;A8MVZ9 P09972 ALDOC Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase 0 62.582 0.029379000000000002 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VDKGVVPLAGTNGETTTQGLDGLSER ddPTM_A549_PD325901_60min_R1 1 VDKGVVPLAGTNGETTTQGLDGLSER 26 1 H3BQN4;J3KPS3;P04075;P04075-2;H3BUH7;H3BPS8;H3BMQ8;H3BR04;H3BU78 H3BQN4 ALDOA Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A 0 66.828 0.00028582 4897500.0 3036.3 2999.4 3274.9 3078.9 3703.5 4099.1 3816.1 4346.3 3704.8 4521.8 4063.6 False True 3344.5429407940787 3252.1699643952156 3497.154407573502 3269.076660310761 3443.378936381398 4065.718288652274 3961.323773750047 4259.609636893609 3549.100139789046 4236.292776304784 3563.802961282778 0.9384758296486241 0.9125560531058677 0.9812984740084265 0.9173000572214768 0.9662091237339244 1.1408370027249861 1.1115439929720983 1.1952427457887227 0.9958744011233326 1.1887000550613902 1.0 11.79920185871652 -7.016531190236571 23.981834829476355 1.0336488685017937 0.9391409154332461 0.36194482472941936 0.08159268849735865 469.3303489680912 680860.2150142267 0.011558181519788779 0.020383204260967996 9.626508746628545e-08 7.016531190236571 -0.09450795306854765 VDKLDASESLR ddPTM_A549_PD325901_60min_R1 2 VDKLDASESLR 11 1 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 104.87 0.00018790000000000001 9291300.0 3385.6000000000004 3247.7 3534.6 3373.2 3742.0 2931.6 3533.4 3501.6 3325.9 3448.7 3884.7 False True 3729.303619653012 3521.3950768041395 3774.4792112764635 3581.5549029069657 3479.174829199187 2907.726021568884 3667.8654705506715 3431.7578410479423 3186.123989128803 3230.9484934411744 3406.9065271422382 1.0946304484558915 1.0336048402707239 1.107890451706214 1.0512630371198428 1.0212122937571664 0.8534798352709506 1.0765970364403656 1.007294392642627 0.9351955986304588 0.9483525502389818 1.0 11.73424665044731 -6.872967625092697 3.5534372204681577 0.9725368592611696 1.0724418371682642 0.4250152228545978 0.05483905932778492 0.17579998266373287 4.309490275070132 0.007843671498618789 0.015592572438874843 1.33977655865852e-07 6.872967625092697 0.09990497790709463 VDLKS(ph)PQVDIK ddPTM_A549_MK2206_60min_R1 4 VDLKSPQVDIK 11 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VDLKS(1)PQVDIK;VDLKS(1)PQVDIK;VDLKS(1)PQVDIK;VDLKS(1)PQVDIK 90.367 8.3439e-05 78402000.0 7293.2 7740.5 8390.8 7476.4 10219.9 7473.199999999999 6843.0 8097.5 12081.5 9678.1 11702.099999999999 True False 8524.113858379444 8134.458387651369 9580.741611514013 9308.118335628345 8716.566248219671 8264.009063691317 8086.284522773282 9245.345422553712 9345.05954019107 7491.810488267637 8796.145608470171 0.9690737554607126 0.9247753220249518 1.0891977052185586 1.0582042123842488 0.9909529282719161 0.9395034406585496 0.9192986204078597 1.0510678010662975 1.0624039160052474 0.8517151513560057 1.0 13.102655770946727 VDLKS(ph)PQVDIK ddPTM_A549_PD325901_60min_R1 3 VDLKSPQVDIK 11 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VDLKS(1)PQVDIK;VDLKS(1)PQVDIK;VDLKS(1)PQVDIK 112.5 1.2737e-05 168013000.0 6041.9 6620.9 7246.5 7282.0 8541.2 6688.4 6689.4 5903.8 5712.299999999999 5483.6 6424.4 True False 6655.2692401883005 7178.866479050569 7738.29106674444 7731.792601378079 7941.29557754038 6633.931887931952 6943.968777580135 5786.044077558494 5472.231896058342 5137.364560162972 5634.239527626999 1.1812187266009497 1.2741500328215773 1.3734402005453281 1.3722868123490157 1.4094707082652298 1.1774316401358247 1.2324589225450913 1.0269432190781267 0.9712458743057928 0.9118115293061922 1.0 12.460005182768619 -8.093252309890092 1.4959719402242473 0.9844797747758094 1.3171153268528912 0.8188064000921307 0.07143358609622293 0.11041469119616308 0.4885730584159678 0.012062540136053682 0.01668702858675318 8.067661911588927e-09 8.093252309890092 0.33263555207708184 VDLTLLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 VDLTLLSPK 9 0 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VDLTLLS(1)PK;VDLTLLS(1)PK 100.88 0.00075677 3073200.0 1112.3 1370.1 1150.8 1149.7 2009.4 1256.8 1444.1 1310.5 1786.3 1610.4 1673.7 True False 1300.02904687592 1439.8322378297446 1314.0007444499124 1431.3765516119936 1713.8199218360837 1389.793741803679 1706.4742772668262 1496.2673882379293 1381.705902134943 1246.6095215286261 1258.074098229935 1.0333485513333547 1.1444733182691995 1.0444541750749532 1.1377521829802304 1.362256741671549 1.10469943205974 1.3564179404597663 1.1893316859023833 1.098270685390434 0.9908872007480011 1.0 10.297001181442615 -9.367834028549707 1.3093531135445846 1.0258159440278114 1.173086972383014 0.28347616149959676 0.1031883481375636 0.3716477617957043 1.3202387742167445 0.024801777236305105 0.02047034398150113 4.287123272501175e-10 9.367834028549707 0.14727102835520256 VDLTLLS(ph)PK ddPTM_A549_PD325901_60min_R1 2 VDLTLLSPK 9 0 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VDLTLLS(1)PK;VDLTLLS(1)PK 121.9 0.00012044 8992600.0 3090.3 2844.2 3060.5 3289.5 3518.4 3194.4 3346.2 3340.7 3354.8 3388.6 4125.9 True False 3404.0249810413784 3083.8907157207677 3268.203934281568 3492.684944003456 3271.279721821063 3168.385865499944 3473.5414721109005 3274.067117771547 3213.809422631259 3174.643217697904 3618.4404562350146 0.940743677341941 0.852270682085385 0.9032078802485346 0.9652459357138609 0.9040579115193809 0.8756219437134659 0.9599554045792199 0.9048282422693815 0.8881752958221195 0.8773512390476418 1.0 11.821152315990386 -10.83005071645513 0.9532244343861429 1.002883241637095 0.9088598976818433 0.0 0.04843971322862 0.38475534800153643 0.5888333758245832 0.025870132990002865 0.0056373443522820445 1.4789356695235955e-11 10.83005071645513 -0.09402334395525169 VDNDENEHQLSLR ddPTM_A549_MK2206_60min_R1 2 VDNDENEHQLSLR 13 0 P06748;P06748-2;E5RGW4;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 189.99 1.6875e-25 31307000.0 2173.9 1965.23 1851.92 1883.31 2608.9 1981.47 2246.8 2202.1 2686.9 2810.1 3432.6 False True 2540.8011732478303 2065.2518128239885 2114.5501031123395 2344.721034545 2225.1342659889324 2191.147840206663 2655.014476949729 2514.2544186484133 2078.32144009762 2175.2964583007906 2580.1906850594924 0.9847338756628549 0.8004260401305842 0.8195324924458378 0.9087394385701911 0.862391403423591 0.8492193437075916 1.028999326415486 0.9744451963210004 0.805491412759557 0.8430758512914459 1.0 11.333261974428451 VDNDENEHQLSLR ddPTM_A549_PD325901_60min_R1 2 VDNDENEHQLSLR 13 0 P06748;P06748-2;E5RGW4;P06748-3 P06748;P06748-3 NPM1 Nucleophosmin 0 ; 160.87 1.4463e-18 43687000.0 5861.1 6831.4 7153.4 6978.5 8381.8 6284.0 6492.3 7529.0 7602.799999999999 7276.7 8444.6 False True 6456.114557286227 7407.106052800387 7638.87274088866 7409.546095676586 7793.091283640231 6232.825187453556 6739.3680292228755 7378.82818861376 7283.280755449182 6817.247920150606 7405.967734729926 0.8717448939198845 1.0001537028125471 1.0314482879889602 1.0004831726352088 1.0522718384384675 0.8415949691793856 0.9099915460904504 0.9963354490475437 0.9834340381061331 0.9205073751781895 1.0 12.854472548856139 VDNLTYRT(ph)SPDSLRR ddPTM_A549_MK2206_60min_R1 1 VDNLTYRTSPDSLRR 15 2 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 VDNLT(0.01)YRT(0.494)S(0.494)PDS(0.001)LRR 87.16 1.3888e-05 9204000.0 1296.1 1422.3 1389.9 1635.1 1850.6 1582.2 1461.5 1372.8 2455.1 2376.9 2206.0 True False 1514.849993397355 1494.6889948655178 1587.0087197696676 2035.699573402429 1578.379191474996 1749.6273538206417 1727.0356320375788 1567.398604023678 1899.0237699890818 1839.9566391712556 1658.1893174973027 0.9135567196173421 0.9013982776836633 0.9570732985814505 1.2276641466216298 0.9518691109753598 1.055143303215429 1.0415189712138453 0.9452470761235787 1.1452394186541193 1.1096179548112717 1.0 10.695393015152128 -6.014942059427406 24.48377611833754 1.0596060923727724 0.9129170160004697 0.38409569077181227 0.07792539646460889 394.3309979921636 646147.3733087904 0.011062138416081892 0.03047821935095474 9.66179771428894e-07 6.014942059427406 -0.14668907637230266 VDNLTYRT(ph)SPDSLRR ddPTM_A549_PD325901_60min_R1 1 VDNLTYRTSPDSLRR 15 2 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 VDNLT(0.029)YRT(0.583)S(0.387)PDSLRR 79.676 0.00015081 15273000.0 1957.9 2396.5 2182.5 2768.6 2860.2 3101.4 2607.3 2821.0 2724.4 2876.1 3353.7 True False 2156.6645666702 2598.46146551748 2330.61757443866 2939.6101340531927 2659.309419154332 3076.1432266658935 2706.5222282693057 2764.7329419683115 2609.9029423562074 2694.5025551617045 2941.216160855903 0.7332560576039416 0.8834649761890739 0.7923992821256779 0.9994539582557431 0.9041530012470979 1.04587458331207 0.9202051397275403 0.9399965153067041 0.8873550258192235 0.916118506018815 1.0 11.522197101778906 -6.253638272226107 24.863761969048053 0.9502083805169563 0.8110825824954782 0.5856498670833021 0.05554673948949682 328.01773395064964 1045457.5135505818 0.00803798113147397 0.020844149053819802 5.576500272696385e-07 6.253638272226107 -0.13912579802147818 VDNLTYRT(ph)SPDTLR ddPTM_A549_MK2206_60min_R1 1 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLT(0.012)Y(0.005)RT(0.536)S(0.414)PDT(0.033)LR 42.633 0.031459 4205400.0 964.07 1307.8 810.96 930.04 1145.0 989.34 728.25 971.11 1546.6 1315.8 1604.8 True False 1126.7814467514768 1374.3614339345597 925.9663223141295 1157.899841751082 976.5720167723289 1094.0313021292586 860.5635983793127 1108.767816399646 1196.2975694126985 1018.559866137212 1206.2838697731963 0.9340931060972676 1.139335000967032 0.7676189208168955 0.9598900149172919 0.80957065019525 0.9069434894582125 0.7134005684259995 0.9191599458327457 0.9917214342239564 0.8443782526319614 1.0 10.236353735285563 -8.702841808984966 4.61920070662745 0.9962944993197547 0.8904139603730534 0.0 0.11491516289245615 0.2677554281975165 11.576351226212873 0.017639632529405605 0.01978553771903275 1.982248925069576e-09 8.702841808984966 -0.10588053894670124 VDNLTYRT(ph)SPDTLR ddPTM_A549_PD325901_60min_R1 1 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLTYRT(0.619)S(0.381)PDTLR 113.88 1.7804e-06 139590000.0 1618.8 1791.9 1836.9 1887.4 2077.5 1989.2 1997.6 2098.2 2583.0 2311.8 2276.7 True False 1783.1393843024248 1942.9097016735968 1961.5630801770328 2003.9804114035958 1931.5835669859196 1973.0006147171573 2073.6197611286643 2056.3497549939425 2474.4454926244593 2165.832553465743 1996.6803331903964 0.893052009709153 0.9730699849029504 0.9824121806432322 1.0036561076361858 0.9673975021828046 0.9881404558959108 1.038533673447532 1.0298843138842377 1.2392797442295962 1.0847167257890835 1.0 10.963387661692154 -8.131518772435522 1.8814593573039173 1.1115300652502438 0.9704499492724256 0.4601605955328978 0.06141563310976093 0.29496814108020636 2.0541952258142504 0.015278624805677292 0.020574481701460198 7.387223309345779e-09 8.131518772435522 -0.14108011597781822 VDNLTYRT(ph)SPDTLRR ddPTM_A549_MK2206_60min_R1 3 VDNLTYRTSPDTLRR 15 2 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLT(0.01)YRT(0.494)S(0.494)PDT(0.002)LRR;VDNLT(0.013)Y(0.001)RT(0.582)S(0.393)PDT(0.011)LRR;VDNLT(0.005)YRT(0.497)S(0.497)PDT(0.001)LRR 82.48200000000001 9.6896e-05 341942900.0 5674.16 6592.3099999999995 5887.009999999999 6794.14 8507.2 6145.290000000001 5949.2300000000005 5477.48 12254.599999999999 9059.1 10325.2 True False 6631.819488107045 6927.830420967372 6721.876540305937 8458.704605000537 7255.802149419694 6795.580508886645 7030.128082919546 6253.929564078975 9478.95266657497 7012.643018181808 7761.167878976951 0.8544873131878739 0.8926273118937577 0.8660908570878627 1.0898752271437187 0.9348853500610178 0.8755873619605833 0.9058080165953364 0.8057974858422139 1.2213307087778718 0.9035551256631481 1.0 12.92205804615091 -8.75885337824365 24.99986086405517 1.1045172783921184 0.9080116985637467 0.20557175866431066 0.10229835636595323 46.04274419565691 445112.6980414622 0.017428501657205626 0.019320587174418882 1.742395022467741e-09 8.75885337824365 -0.1965055798283717 VDNLTYRT(ph)SPDTLRR ddPTM_A549_PD325901_60min_R1 3 VDNLTYRTSPDTLRR 15 2 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLT(0.102)YRT(0.796)S(0.102)PDTLRR;VDNLT(0.053)Y(0.002)RT(0.535)S(0.405)PDT(0.006)LRR;VDNLT(0.09)Y(0.001)RT(0.455)S(0.455)PDTLRR 106.94 1.5279e-06 252566700.0 5588.3 7819.08 6580.33 8914.9 7303.0 7803.3 6810.6 7631.8 9132.72 7704.000000000001 8319.3 True False 6155.620102110973 8478.021312663646 7026.910764538805 9465.553125793102 6790.062473982273 7739.752511975874 7069.781109903317 7479.577761968718 8748.9035382893 7217.5681252271315 7296.078840387781 0.8436888137825832 1.1619969435819646 0.9631078444000654 1.2973479772992713 0.9306454360656807 1.06080987901777 0.9689836506108208 1.025150347960218 1.1991240404173458 0.9892393274691537 1.0 12.832905603805905 VDNLTYRTS(ph)PDTLR ddPTM_A549_MK2206_60min_R1 4 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLTYRT(0.211)S(0.787)PDT(0.002)LR;VDNLTYRT(0.013)S(0.983)PDT(0.003)LR;VDNLTYRT(0.16)S(0.825)PDT(0.015)LR;VDNLTYRT(0.015)S(0.792)PDT(0.193)LR 175.6 6.414199999999999e-23 1006068000.0 13655.7 16416.8 13134.800000000001 13068.2 16765.6 13084.3 13218.8 12546.8 20683.6 21102.1 22068.800000000003 True False 15960.448310189237 17252.344998177745 14997.512146507392 16269.909586653794 14299.402449256026 14468.871941344587 15620.484853081316 14325.347322963486 15998.797624922072 16335.120953955051 16588.507892105386 0.9621388743338966 1.0400178913251314 0.9040904850547069 0.9807940347906025 0.8620065494896761 0.8722226275836688 0.9416449601543271 0.8635705764579973 0.9644506744657871 0.9847251519064638 1.0 14.01789650372924 -9.093300293368749 3.3708858112955484 0.9861756142343137 0.928809422246148 0.18323807978612794 0.05173792634723428 0.2735492944282148 6.48063571727997 0.010000162407654323 0.00982275995050522 8.06677059679058e-10 9.093300293368749 -0.057366191988165616 VDNLTYRTS(ph)PDTLR ddPTM_A549_PD325901_60min_R1 8 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLTYRT(0.023)S(0.964)PDT(0.013)LR;VDNLTYRT(0.415)S(0.569)PDT(0.016)LR;VDNLT(0.001)YRT(0.082)S(0.9)PDT(0.017)LR;VDNLTYRT(0.388)S(0.612)PDTLR;VDNLTYRT(0.026)S(0.974)PDTLR;VDNLTYRT(0.002)S(0.976)PDT(0.023)LR;VDNLTYRT(0.021)S(0.976)PDT(0.002)LR;VDNLT(0.042)Y(0.004)RT(0.33)S(0.602)PDT(0.022)LR 180.46 5.269000000000001e-24 1644394600.0 27797.2 29493.0 29475.0 32578.800000000003 32987.9 33837.6 31318.299999999996 34259.7 32226.500000000004 35119.7 37993.9 True False 30619.1512807829 31978.478615692515 31475.350747573655 34591.118484176885 30670.943706076945 33562.03780442052 32510.135044531336 33576.363407285266 30872.132275672553 32902.2361484345 33320.891163175904 0.9189175382746427 0.9597125856895767 0.9446131135399578 1.0381210488873345 0.9204718912191787 1.0072371005944498 0.9756682342415691 1.0076670291577223 0.926509802048465 0.9874356597279705 1.0 15.024139365472049 -5.207516745427994 1.5766157996969699 0.9718925585874565 0.8956708834383107 0.18601534835100497 0.034795918002365624 1.8509675151918294 3.848249784880352 0.00521583377008951 0.22487312518406283 6.201307323328747e-06 5.207516745427994 -0.0762216751491458 VDNLTYRTS(ph)PDTLRR ddPTM_A549_MK2206_60min_R1 3 VDNLTYRTSPDTLRR 15 2 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLTYRT(0.188)S(0.812)PDTLRR;VDNLTYRT(0.16)S(0.684)PDT(0.156)LRR;VDNLT(0.034)Y(0.002)RT(0.414)S(0.542)PDT(0.008)LRR 128.79 6.406199999999999e-10 314461700.0 6848.2 7919.389999999999 7491.6 7999.9 10673.0 7195.67 7329.47 6082.879999999999 11800.2 12677.2 12479.0 True False 8004.008737584889 8322.453124550397 8554.021530344946 9959.875859129155 9103.015838437612 7957.111023300827 8661.139824803608 6945.146868038713 9127.473541047279 9813.41171530222 9380.119897120965 0.8532949285692558 0.8872437896134785 0.9119309373615179 1.0618068818273991 0.9704583670867145 0.8482952361561069 0.9233506522088237 0.7404113107520495 0.9730657647402533 1.0461925671455696 1.0 13.195390648114502 -8.97336766506097 24.99687470043382 0.9881173603247487 0.9033418589771944 0.26687655018639866 0.07742690235359012 213.1547487343604 200067.017194944 0.013564672791743664 0.01415033065529919 1.0632425171605787e-09 8.97336766506097 -0.0847755013475543 VDNLTYRTS(ph)PDTLRR ddPTM_A549_PD325901_60min_R1 3 VDNLTYRTSPDTLRR 15 2 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLTYRT(0.365)S(0.635)PDTLRR;VDNLTYRT(0.185)S(0.815)PDTLRR;VDNLTYRT(0.197)S(0.781)PDT(0.021)LRR 142.88 3.4651e-14 835970000.0 9495.400000000001 10825.9 10601.900000000001 13862.5 11750.2 12038.8 11337.5 12805.5 15682.5 11964.099999999999 12579.5 True False 10459.366017855982 11738.236586499348 11321.408688403768 14718.755140978243 10924.906487989385 11940.760004251422 11768.954766618057 12550.08425677958 15023.419062362802 11208.68468419392 11032.30124802064 0.9480674777379333 1.0639880404467168 1.0262055426047216 1.3341509454900906 0.9902654253526186 1.0823453544104205 1.0667724259913212 1.1375762839173065 1.3617665729584958 1.0159879097033293 1.0 13.429446136282987 -8.515286613163315 24.786447700248996 1.1749835332365164 1.0798817646917482 0.0025008622435689354 0.12938924055430345 683.5829174097913 2231737.4401066764 0.02575611015257568 0.029844265424572892 3.0529056794862726e-09 8.515286613163315 -0.09510176854476815 VDNQAKS(ph)PTTTQSPK ddPTM_A549_MK2206_60min_R1 2 VDNQAKSPTTTQSPK 15 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 VDNQAKS(0.921)PT(0.06)T(0.014)T(0.004)QS(0.001)PK;VDNQAKS(0.414)PT(0.264)T(0.264)T(0.049)QS(0.008)PK 48.111999999999995 0.0077065 4670200.0 2031.6799999999998 1973.4 1707.67 1863.89 2598.0 1878.0700000000002 1807.75 1949.0900000000001 2523.7 2543.2 2497.0 True False 2374.5779141929934 2073.8376309270975 1949.8432840413457 2320.5431336732026 2215.8376415497887 2076.8061208380295 2136.1947751049825 2225.379476337784 1952.0859795207728 1968.6893536708892 1876.9259863058774 1.2651420096040031 1.1049117791846321 1.038849319721436 1.2363530318211653 1.1805674052768322 1.1064933492265998 1.1381347963056294 1.1856511618328247 1.040044196608319 1.0488902428942435 1.0 10.874156045488958 -8.860912225884302 4.887745164848146 1.0173405875359534 1.1523179940049302 0.46334273142398397 0.06077137817370179 0.12292281223918804 4.8134532918643 0.010444494023862579 0.011065328473957765 1.377487841207735e-09 8.860912225884302 0.13497740646897682 VDNQPEELVRS(ph)AEDVSTVPTQPDNPFSHPDK ddPTM_A549_PD325901_60min_R1 2 VDNQPEELVRSAEDVSTVPTQPDNPFSHPDK 31 1 Q9HCH5-13;Q9HCH5;Q9HCH5-15;A0A0U1RR07;Q9HCH5-7;Q9HCH5-12 Q9HCH5-13;A0A0U1RR07 SYTL2 Synaptotagmin-like protein 2 1 VDNQPEELVRS(0.868)AEDVS(0.065)T(0.065)VPT(0.002)QPDNPFSHPDK;VDNQPEELVRS(0.961)AEDVS(0.019)T(0.019)VPTQPDNPFSHPDK 83.59 1.8519e-06 8650800.0 1479.95 1573.8200000000002 1748.29 1834.43 1589.44 1672.85 1531.3899999999999 2124.3 2135.29 1994.67 2192.3999999999996 True False 1630.1934345183927 1706.4513347217703 1866.9394727218169 1947.7385748071943 1477.8032176703255 1659.226864231649 1589.6678844587627 2081.9291700188887 2045.5511869709974 1868.7261957874887 1922.7486987686684 0.8478452933357185 0.887506170626762 0.9709742484378786 1.012996953816445 0.7685888533518256 0.862945253997166 0.8267684099730708 1.0827879750235483 1.0638681946740995 0.9719035030340804 1.0 10.908954500937558 -8.264101811932683 24.992750175163575 1.03494978653126 0.8859956544497115 0.5186372731740305 0.06805950933073386 144.95292324012246 1360697.7723396893 0.011319420458106503 0.0140113741062584 5.443750196990028e-09 8.264101811932683 -0.1489541320815485 VDNS(ph)SLTGESEPQTR ddPTM_A549_MK2206_60min_R1 1 VDNSSLTGESEPQTR 15 0 P05023-2;P05023-4;P05023;M0QXF2;M0R116;B1AKY9;A0A2R8YEY8;A0A0A0MT26;P05023-3;P13637;P50993;P13637-2;P13637-3;P20648 P05023-2 ATP1A1;ATP1A3;ATP1A2;ATP4A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Potassium-transporting ATPase alpha chain 1 1 VDNS(0.496)S(0.496)LT(0.007)GESEPQTR 80.632 0.00038339999999999994 1553900.0 691.83 816.19 430.64 771.16 803.77 569.92 651.35 646.76 891.54 900.57 854.57 True False 808.5939903804432 857.7305847706442 491.71122748514927 960.0942346186879 685.5364977476804 630.2285561177221 769.6918637890361 738.4402106194301 689.6076134968292 697.1306115269718 642.3566840678466 1.2587928333832648 1.3352870858895733 0.7654800513186752 1.4946434876939514 1.0672209299767683 0.9811193247444382 1.1982312675798983 1.1495797100500553 1.0735587106056983 1.0852702693342566 1.0 9.327230800893561 -2.0000000993244598 0.07406818247099863 0.8561872799943054 1.8134180813901721 0.07810714841277289 0.17793170409193534 271.24698887715243 1.4343522814088376 3.000146432511621 26.818382886655957 0.009999997712970058 2.0000000993244598 0.9572308013958667 VDNS(ph)SLTGESEPQTR ddPTM_A549_PD325901_60min_R1 1 VDNSSLTGESEPQTR 15 0 P05023-2;P05023-4;P05023;M0QXF2;M0R116;B1AKY9;A0A2R8YEY8;A0A0A0MT26;P05023-3;P13637;P50993;P13637-2;P13637-3;P20648 P05023-2 ATP1A1;ATP1A3;ATP1A2;ATP4A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Potassium-transporting ATPase alpha chain 1 1 VDNS(0.598)S(0.401)LT(0.001)GESEPQTR 99.566 9.3159e-06 2225500.0 716.09 383.76 703.06 1012.5 957.07 760.19 701.95 758.01 776.46 747.95 746.96 True False 788.7869296424044 416.10080200583707 750.7738794432272 1075.0398254456607 889.8487049122568 753.9992646801916 728.663091371779 742.8908959026584 743.8280864123842 700.7243093540545 655.0886553695697 1.2040918785220125 0.6351824269817234 1.1460645414774837 1.6410600559693322 1.3583637842274139 1.1509881273318971 1.1123121815637338 1.1340310808520335 1.1354617124192938 1.0696633251246572 1.0 9.355546354450592 -10.005146358941989 0.6207899139047192 1.00234413842869 1.175750875649312 0.0518634413274508 0.2241712200417629 1.8028187934393531 1.373159608286926 0.14863774282835232 0.05542122713532322 9.882200045203321e-11 10.005146358941989 0.17340673722062205 VDNSS(ph)LTGESEPQTR ddPTM_A549_MK2206_60min_R1 1 VDNSSLTGESEPQTR 15 0 P05023-2;P05023-4;P05023;M0QXF2;M0R116;B1AKY9;A0A2R8YEY8;A0A0A0MT26;P05023-3;P13637;P50993;P13637-2;P13637-3;P20648 P05023-2 ATP1A1;ATP1A3;ATP1A2;ATP4A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Potassium-transporting ATPase alpha chain 1 1 VDNS(0.038)S(0.922)LT(0.04)GESEPQTR 92.575 2.6721e-05 2138300.0 452.09 766.16 618.77 683.71 751.47 477.25 539.05 555.11 1004.8 1017.6 836.77 True False 528.3917394606979 805.1542714660517 706.5208903747582 851.2189806929083 640.9297584662897 527.7522782270893 636.9884074237815 633.7985424530766 777.2144043358843 787.7234532461065 628.9769153228549 0.8400812916790015 1.2801014661289511 1.1232858840488602 1.3533389858290366 1.019003627720263 0.8390646228346762 1.0127373388525942 1.0076658252676043 1.235680333255059 1.2523884963914245 1.0 9.296863258134625 -11.316104294689282 1.9110846753522766 0.9995092110874094 1.1092855275070619 0.0 0.1757034638677694 0.938001398431442 6.188004636255121 0.12497819800874141 0.024351058777300275 4.829428106540243e-12 11.316104294689282 0.10977631641965246 VDNSS(ph)LTGESEPQTR ddPTM_A549_PD325901_60min_R1 1 VDNSSLTGESEPQTR 15 0 P05023-2;P05023-4;P05023;M0QXF2;M0R116;B1AKY9;A0A2R8YEY8;A0A0A0MT26;P05023-3;P13637;P50993;P13637-2;P13637-3;P20648 P05023-2 ATP1A1;ATP1A3;ATP1A2;ATP4A Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Potassium-transporting ATPase alpha chain 1 1 VDNS(0.023)S(0.976)LT(0.001)GESEPQTR 126.63 4.5934e-08 1992700.0 864.43 882.74 783.29 917.85 1022.0 772.69 715.24 969.09 1052.2 888.61 1013.5 True False 952.1862972402679 957.1315977762989 836.4487697054101 974.5435099114069 950.2182457085969 766.3974688245534 742.4588495943457 949.7607397136024 1007.9796931240635 832.5030129488682 888.84592510584 1.0712613630161893 1.0768250950380718 0.9410503508870891 1.0964144430266274 1.069047198023042 0.8622388280998127 0.8353065797156428 1.0685324789001074 1.1340319673559143 0.9366111599709896 1.0 9.795789549943173 -11.566207290970327 2.9047290682187517 0.9989920290156495 1.0402365923414998 0.0 0.09703243093723636 1.299978084283085 19.98238389798915 0.09493654649441999 0.015167885525749358 2.715143007907733e-12 11.566207290970327 0.04124456332585025 VDPSLMEDS(ph)DDGPSLPTK ddPTM_A549_MK2206_60min_R1 4 VDPSLMEDSDDGPSLPTK 18 0 Q5T092;A0A0A0MR06;Q5T091;O15258 Q5T092 RER1 Protein RER1 1 VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPS(0.003)LMEDS(0.994)DDGPS(0.004)LPTK 156.49 1.4106999999999999e-22 25488900.0 6209.099999999999 6110.700000000001 5521.709999999999 5208.02 8190.7 6166.4 6009.200000000001 6077.780000000001 9882.1 9569.4 9287.5 True False 7257.044282079715 6421.708529090007 6304.7715073310055 6483.985133796906 6985.858880154681 6818.924355074954 7100.993855655294 6939.323927420624 7643.820128470984 7407.665893763059 6981.157428039981 1.0395187842250382 0.9198630163097404 0.9031126388881798 0.9287836867499691 1.0006734488031765 0.9767612928604913 1.0171656962116322 0.9940076554567684 1.0949216096702536 1.0610942340320242 1.0 12.769250529874066 -7.647173776826273 1.12079755643969 1.0425783254733982 0.9473399803113405 0.4331282593670208 0.042882029326062096 0.3443288584434287 0.8722137331987979 0.008568916281937003 0.015107624438928217 2.2533373904872017e-08 7.647173776826273 -0.09523834516205776 VDPSLMEDS(ph)DDGPSLPTK ddPTM_A549_PD325901_60min_R1 4 VDPSLMEDSDDGPSLPTK 18 0 Q5T092;A0A0A0MR06;Q5T091;O15258 Q5T092 RER1 Protein RER1 1 VDPSLMEDS(0.999)DDGPS(0.001)LPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK 200.69 3.654199999999999e-49 38800300.0 12932.699999999999 11869.7 12591.9 11764.6 14118.4 13833.4 13445.600000000002 14430.999999999998 14318.699999999999 14289.199999999999 14038.1 True False 14245.618183449445 12870.001275715775 13446.462055245895 12491.272622654833 13126.772289835868 13720.74537684915 13957.27966571464 14143.162384099507 13716.93483362054 13386.97747338988 12311.502694847848 1.1570982467811173 1.0453639652860287 1.092186907522914 1.0146017860096166 1.0662201532335445 1.1144655300762796 1.133677992984197 1.1487762895116107 1.1141560192616327 1.0873552810894562 1.0 13.587719241948175 -10.732084220197633 1.0325967188830318 1.0010813353584593 1.0966532239134683 0.0680140181906348 0.04816220009959197 0.4154829839775781 0.8007117712428605 0.028071861531635982 0.007577806806567805 1.8531722136804524e-11 10.732084220197633 0.09557188855500898 VDS(ph)EDRR ddPTM_A549_PD325901_60min_R1 1 VDSEDRR 7 1 F8WC91;B9A018;Q53GS9-3;Q53GS9;C9J0X5;C9JIU2;A0A087X1B2;Q53GS9-2 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 VDS(1)EDRR 59.35 0.012768 4371700.0 670.31 618.9 509.13 555.98 369.38 385.49 536.14 415.76 396.32 609.83 836.84 True False 738.3593777438592 671.056875029739 543.6826234474019 590.3216218778058 343.4360230918214 382.3506972488021 556.5431010870649 407.4673406425896 379.66404863992494 571.3252297257611 733.9139851658329 1.006057102968302 0.9143535735704902 0.740798832610545 0.8043471494066414 0.467951326767836 0.520974807643715 0.7583219727871927 0.5551976783090181 0.5173140944495522 0.778463472932276 1.0 9.519467178665717 -5.647389164375896 1.9408093606470633 0.7134862648947032 1.0166205026573438 0.32225008800747323 0.15300100496170205 0.5631928936545951 3.591553484320449 0.029574535530576082 0.23154456173419538 2.2522201290271075e-06 5.647389164375896 0.3031342377626406 VDS(ph)EGDFSENDDAAGDFR ddPTM_A549_MK2206_60min_R1 1 VDSEGDFSENDDAAGDFR 18 0 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 VDS(0.5)EGDFS(0.5)ENDDAAGDFR 96.666 2.1252e-06 18461000.0 996.58 1128.9 514.23 888.31 1274.4 1195.1 842.15 1013.0 1474.0 1249.9 1331.9 True False 1164.7783399582877 1186.3561880782406 587.1555464185595 1105.9459898777504 1086.9374481874715 1321.564688756824 995.1577540338332 1156.5958521823898 1140.1413534943213 967.5467219067499 1001.1524714300356 1.1634375114656919 1.1849905203586644 0.5864796453829583 1.1046728859371728 1.0856862258302191 1.320043376479024 0.9940121833913673 1.155264442917791 1.1388288857398068 0.9664329355594722 1.0 9.967445992127592 VDS(ph)LKK ddPTM_A549_MK2206_60min_R1 2 VDSLKK 6 1 O95810 O95810 SDPR Serum deprivation-response protein 1 VDS(1)LKK;VDS(1)LKK 62.2 0.025737 19610600.0 6102.1 10055.9 5363.1 3224.8 5941.700000000001 4463.299999999999 2882.8999999999996 5370.0 4338.8 9268.8 9106.1 True False 7131.985297978555 10567.702357778355 6123.668224330314 4014.876144766775 5067.683800922394 4935.60344350124 3406.6856131379623 6131.213944935275 3356.068727639862 7174.971642538824 6844.804054425287 1.0419560941803148 1.5439013701124356 0.8946447810103861 0.5865582291097269 0.7403694482161322 0.7210730072412058 0.4977038913094203 0.895747182269058 0.49030895566252247 1.0482362366385167 1.0 12.740793526838447 -5.9342961690238445 6.083565619784325 0.7323904919862438 1.2868211546188824 0.5076200952318632 0.2045403182549687 0.1175870891195498 8.064509624816326 0.02929258844039326 0.09302244634330457 1.1633324192004005e-06 5.9342961690238445 0.5544306626326385 VDS(ph)LKK ddPTM_A549_PD325901_60min_R1 2 VDSLKK 6 1 O95810 O95810 SDPR Serum deprivation-response protein 1 VDS(1)LKK;VDS(1)LKK 53.166000000000004 0.036563 34750000.0 8620.7 11943.9 7498.700000000001 7041.0 8507.4 6816.400000000001 5243.5 5985.799999999999 5449.3 8439.6 12464.1 True False 9495.86711777608 12950.45437012069 8007.606875346248 7475.90657872879 7909.869572936711 6760.889498370215 5443.044261853296 5866.408523230743 5220.2848714512065 7906.722215688852 10931.094716439766 0.8687022996420312 1.184735354149289 0.7325530592378133 0.6839119752100801 0.7236118410940765 0.6185006784546665 0.4979413684584817 0.5366716395209702 0.4775628614396859 0.7233239140996168 1.0 13.416150269387538 -5.851485566797223 7.3676735907150706 0.6997373793924758 1.024885824632212 0.4338871447502618 0.15527707704910695 0.21348664605013912 14.767670730521571 0.029730664989140957 0.09375295622705043 1.4077140110984187e-06 5.851485566797223 0.3251484452397361 VDS(ph)LVS(ph)LSEEDLESDQR ddPTM_A549_PD325901_60min_R1 2 VDSLVSLSEEDLESDQR 17 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 2 VDS(1)LVS(0.979)LS(0.021)EEDLESDQR;VDS(0.998)LVS(0.892)LS(0.107)EEDLES(0.003)DQR 75.574 0.00054387 9235100.0 833.48 988.28 1015.73 741.4000000000001 1124.07 1096.0 923.49 1212.8400000000001 1087.84 777.8199999999999 1048.83 True False 918.0942760244535 1071.5658239689612 1084.6635458806782 787.1945941584324 1045.1192010309803 1087.0745393776422 958.6339173031187 1188.6489547454257 1042.121867865503 728.7083124564084 919.8305590811633 0.9981123881571795 1.1649600172442294 1.1791992940136384 0.8558039156089535 1.1362083926358897 1.181820421865025 1.0421853327646744 1.2922477330311686 1.1329498216568266 0.7922201597480403 1.0 9.845224318241096 -4.9973541033687106 16.383511719517923 1.0878928676577215 0.8989079594829178 0.021061000557050624 0.14152609505811545 9493267.5594497 281272865.48194337 0.015199445809783928 35357894.35597355 1.0061109985691916e-05 4.9973541033687106 -0.18898490817480373 VDS(ph)LVSLSEEDLESDQREHR ddPTM_A549_MK2206_60min_R1 2 VDSLVSLSEEDLESDQREHR 20 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDS(0.971)LVS(0.022)LS(0.006)EEDLESDQREHR;VDS(0.993)LVS(0.006)LSEEDLESDQREHR 60.278 0.0010462 2071840.0 0.0 0.0 0.0 0.0 108.24 0.0 0.0 0.0 0.0 0.0 109.7 True False 0.0 0.0 0.0 0.0 92.31803938466099 0.0 0.0 0.0 0.0 0.0 82.45846243402274 0.0 0.0 0.0 0.0 1.119570225536611 0.0 0.0 0.0 0.0 0.0 1.0 6.365595655076576 -10.734246552055895 0.9056601427883536 1.0196056104397226 0.12701705322071863 0.0 0.4313628123250427 0.41238580013443743 0.5800186321042536 0.248355651959763 0.05870761543416984 1.8439682881075094e-11 10.734246552055895 -0.892588557219004 VDS(ph)LVSLSEEDLESDQREHR ddPTM_A549_PD325901_60min_R1 1 VDSLVSLSEEDLESDQREHR 20 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDS(0.992)LVS(0.007)LS(0.001)EEDLESDQREHR 58.457 0.0018102 1163700.0 171.63 0.0 211.49 213.65 109.11 263.54 213.65 0.0 220.22 250.89 310.39 True False 189.05375125267193 0.0 225.84298319268368 226.84667526564488 101.44649000906557 261.3938176164086 221.780567663766 0.0 210.96491923567888 235.04876258284477 272.2139977243236 0.6945041505328111 0.0 0.8296523510205353 0.8333394945228971 0.37267183486942657 0.9602511986952531 0.8147287410560257 0.0 0.7749965872413628 0.8634705215302089 1.0 8.088597444449988 -14.999968845690223 0.12427456320741286 2.501764474352465 0.3979501508940799 0.11244794818469572 0.32347993335936825 89.2475993843999 0.7667784584924326 32.65466782969501 1.0841416463495266 1.0000717380223245e-15 14.999968845690223 -2.1038143234583853 VDS(ph)PDVKR ddPTM_A549_MK2206_60min_R1 1 VDSPDVKR 8 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4;K7EPS6 Q7Z4V5-2;K7EPS6 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 VDS(1)PDVKR 41.283 0.037859 11037000.0 3392.2 3258.4 3171.4 3117.0 4332.3 3190.9 3208.9 3076.6 3987.2 4184.5 4415.5 True False 3964.7204286725632 3424.2386422483323 3621.152207984404 3880.665139927447 3695.024408963107 3528.5589200520053 3791.915593325615 3512.717471692343 3084.105566250036 3239.2185437385356 3319.0094883995207 1.1945492902415336 1.0317049873513784 1.0910340029580878 1.1692238764278935 1.113291306300214 1.0631361351586652 1.1424841075564798 1.05836319057534 0.9292246909897329 0.9759594104988649 1.0 11.696537038467383 -8.580087954898417 4.645812949271846 0.9668947145871868 1.110523238564698 0.6607847300473078 0.045839323269088725 0.090227483141831 4.0507991252768285 0.008030182623956978 0.009175052552364685 2.629735354390541e-09 8.580087954898417 0.14362852397751114 VDS(ph)PDVKR ddPTM_A549_PD325901_60min_R1 2 VDSPDVKR 8 1 Q7Z4V5-2;Q7Z4V5-4;Q7Z4V5;Q7Z4V5-3;K7ERA4;K7EPS6 Q7Z4V5-2;K7EPS6 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 VDS(1)PDVKR;VDS(1)PDVKR 66.758 0.0034836999999999997 31938000.0 7005.0 8472.2 8296.1 7795.5 8262.0 8616.0 8058.299999999999 7899.700000000001 7882.7 8774.3 9080.1 True False 7716.1424431915575 9186.182027188492 8859.123234501976 8277.010330134963 7681.705622352664 8545.834152625695 8364.963016170954 7742.134286305233 7551.417531827657 8220.289200568595 7963.305263496338 0.9689622823530613 1.1535639691345 1.1124932350781596 1.039393826590655 0.9646378442335343 1.0731516461888835 1.0504385728518795 0.9722262339728519 0.9482767873339268 1.0322710141792841 1.0 12.959151647278963 -7.506016564586837 0.7318329562975946 0.9754738101048861 1.0751572059688634 0.1627637279715285 0.057435305246401884 0.5773748227854791 0.6158683458726008 0.011140359376680703 0.02506645457045688 3.118770627638666e-08 7.506016564586837 0.09968339586397734 VDS(ph)PMAYSSNGK ddPTM_A549_MK2206_60min_R1 1 VDSPMAYSSNGK 12 0 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625 A0A0G2JMZ8 OCLN Occludin 1 VDS(0.978)PMAY(0.012)S(0.008)S(0.001)NGK 73.46600000000001 0.0014079000000000001 2507600.0 4287.2 4102.9 4426.7 3640.1 4726.3 4237.2 3296.5 3287.7 5823.5 5750.0 7006.4 True False 5010.77454802341 4311.720085097189 5054.472623789038 4531.924663410298 4031.0675308917516 4685.577691574273 3895.4313794128457 3753.7415431589775 4504.486548218572 4451.071006451562 5266.517513197233 0.9514398339067585 0.8187042147477075 0.9597371718831587 0.8605163947625472 0.7654142459016612 0.8896918466202386 0.7396598168811521 0.7127559214894039 0.8553064785089756 0.8451639997963999 1.0 12.362633579126033 -10.26292561569978 0.9636069382530243 0.9891275228351205 0.8380411953027475 0.030073060277599928 0.08682833562889997 0.40450546372697266 0.7374638218205353 0.034790440338348175 0.01457483846010322 5.458513444188867e-11 10.26292561569978 -0.15108632753237305 VDS(ph)PMLNR ddPTM_A549_MK2206_60min_R1 2 VDSPMLNR 8 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 VDS(1)PMLNR;VDS(1)PMLNR 92.051 0.0025948 6191600.0 2360.02 2898.5 2810.8 2220.15 3512.1000000000004 2699.2 1977.79 2707.0 3705.4 2998.9 3579.0 True False 2758.333679050713 3046.021269505521 3209.4137056828404 2764.0868496663206 2995.4747424507373 2984.8275524160485 2337.1288420715728 3090.7255398398133 2866.1328163079097 2321.446407173495 2690.235524625043 1.0253130827402783 1.1322507793922862 1.1929861442633944 1.027451620635175 1.1134618939612126 1.1095041772716405 0.8687450673662912 1.1488680123167243 1.0653836030610675 0.8629156763131552 1.0 11.393516767977129 VDS(ph)PMLNR ddPTM_A549_PD325901_60min_R1 1 VDSPMLNR 8 0 Q8IWQ3-6;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3;Q8IWQ3-5 Q8IWQ3-6 BRSK2 Serine/threonine-protein kinase BRSK2 1 VDS(1)PMLNR 46.446999999999996 0.014094 12099000.0 4614.4 4077.9 4349.5 4211.5 4487.3 4030.1 3945.7 3864.6 4976.6 4225.7 4747.0 True False 5082.8504910582615 4421.558944391297 4644.6832256682455 4471.63478998953 4172.127528344607 3997.280201775397 4095.855772669887 3787.5175212799504 4767.450808592682 3958.8885808375276 4163.149093712306 1.2209148355351962 1.0620707653898998 1.1156658387957354 1.0740991228834769 1.0021566449892128 0.9601578304780329 0.9838359569816864 0.9097722507705333 1.1451549539249184 0.9509360562696931 1.0 12.023459510905706 -2.0000069302532335 0.8812240263870887 1.0418501665934972 77.7631820413551 0.37858683074461486 0.07074535496486467 779.0032793467735 1.7742542730282893 0.012117087279677138 120111.87970782722 0.00999984042629534 2.0000069302532335 76.7213318747616 VDS(ph)PTVNTTLR ddPTM_A549_MK2206_60min_R1 1 VDSPTVNTTLR 11 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 VDS(0.814)PT(0.185)VNTTLR 153.75 1.0307e-12 12908000.0 1826.8 1858.7 2002.8 1819.8 2570.1 2177.0 1544.2 2314.5 2665.3 2410.9 2499.2 True False 2135.1191790280773 1953.29989085041 2286.8271558778974 2265.651081693927 2192.0416945908837 2407.368695024356 1824.761151551439 2642.5874628589745 2061.6138056095083 1866.2760155572298 1878.5796655889649 1.1365603589447366 1.0397748504522533 1.2173171027915606 1.2060447172910334 1.1668611849386985 1.281483420225145 0.971351486964673 1.4066943826044667 1.0974321948508685 0.9934505572177171 1.0 10.875426582815361 -9.346405977884165 1.9658170028992583 1.0302913023308022 1.1733196553690735 0.2615242699111606 0.1110050056859656 0.29037572234703846 2.2967073486312963 0.022059240734185016 0.019349979948225543 4.503954786176853e-10 9.346405977884165 0.14302835303827122 VDS(ph)PTVNTTLR ddPTM_A549_PD325901_60min_R1 2 VDSPTVNTTLR 11 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 VDS(0.964)PT(0.036)VNTTLR;VDS(0.947)PT(0.053)VNTTLR 174.89 5.1678e-33 15690000.0 3914.3 4327.7 4640.6 3765.3 4110.3 4444.5 3760.0 4342.0 4400.8 4793.8 4673.8 True False 4311.676854444641 4692.410467064468 4955.539022194754 3997.8740293832575 3821.606707765212 4408.305465569277 3903.0888575509466 4255.3954037668955 4215.84968019424 4491.118649884975 4098.952229659279 1.0518973173793356 1.1447829113769692 1.2089770127930175 0.9753404785875187 0.9323374593421108 1.0754712957305463 0.9522162345071747 1.0381666253574808 1.028518861402949 1.0956747964487243 1.0 12.001039461159479 -6.272758242005402 24.997276533833013 1.0077165595868032 1.1361754656686953 0.47685490588434165 0.057235014615161485 363.68338925572795 803180.7139586076 0.006728049989005216 0.01577001545825623 5.336318687964281e-07 6.272758242005402 0.12845890608189214 VDS(ph)PTVTTTLK ddPTM_A549_MK2206_60min_R1 2 VDSPTVTTTLK 11 0 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3 Q07866-6 KLC1 Kinesin light chain 1 1 VDS(0.999)PT(0.001)VTTTLK;VDS(0.876)PT(0.124)VTTTLK 162.22 1.6594e-13 27597000.0 8296.1 8832.9 8131.6 8023.2 11386.900000000001 9317.5 8947.0 9116.8 13201.7 11631.5 12271.5 True False 9696.278859828566 9282.456881633712 9284.783153952816 9988.884360175136 9711.902094135216 10303.471665544059 10572.55408815615 10409.134319029044 10211.53602878288 9003.936071572416 9224.147873829626 1.0511842386372026 1.006321343564918 1.0065735373015021 1.0829059222386481 1.0528779706241944 1.117010677460695 1.1461821983743525 1.1284656817527192 1.107043834125278 0.9761265967036384 1.0 13.171199925918321 -6.26211204400601 24.847489173720856 1.0706009445671898 1.0198558702483576 0.18283946571988474 0.05068555879775477 87.78567374619497 3242816.639034675 0.007963559116707368 0.019523092234683594 5.468748559792961e-07 6.26211204400601 -0.05074507431883224 VDS(ph)PTVTTTLK ddPTM_A549_PD325901_60min_R1 2 VDSPTVTTTLK 11 0 Q07866-6;G3V5R9;H0YG16;Q07866-4;Q07866-9;G3V3H3;Q07866-10;Q07866-5;Q07866-7;Q07866;F8W6L3;E7EVH7;G5E9S8;H0YJU9;H0YJT3;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3 Q07866-6 KLC1 Kinesin light chain 1 1 VDS(0.989)PT(0.011)VTTTLK;VDS(0.905)PT(0.083)VT(0.012)TTLK 190.78 4.516499999999999e-19 52484000.0 10740.8 11223.400000000001 10553.1 10222.8 12158.4 11349.5 10290.2 11042.2 12846.0 10998.2 14349.099999999999 True False 11831.198109040954 12169.235306525728 11269.296826945532 10854.239138336685 11304.435928202945 11257.073434914737 10681.799192013495 10821.954658561674 12306.12729316834 10303.771775035444 12584.251666439286 0.9401590513795399 0.9670209742371605 0.8955079035012798 0.862525593578493 0.8983002110765587 0.8945365789954776 0.8488227568191912 0.8599601267846978 0.9778990137321656 0.8187830351894811 1.0 13.61933180747333 -8.85544889132765 6.175199912770275 0.9902477157923962 0.8957080961350247 0.0 0.06120351812122049 0.10612603205703469 5.801129885953301 0.006297901450233437 0.0066846014222611645 1.3949258057333943e-09 8.85544889132765 -0.09453961965737157 VDS(ph)TTCLFPVEEK ddPTM_A549_MK2206_60min_R1 2 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.968)T(0.031)T(0.001)CLFPVEEK;VDS(0.972)T(0.028)TCLFPVEEK 177.38 3.8953e-22 196212000.0 6386.3 7204.9 6895.8 5640.9 8234.1 7301.4 5593.9 6243.299999999999 8923.7 8439.7 8872.4 True False 7464.151309955659 7571.598635383933 7873.728131367485 7022.920753229624 7022.874797646311 8074.029301722937 6610.239221385566 7128.30689430436 6902.496198220674 6533.1659083737895 6669.138214217164 1.1192077702099048 1.135318896112082 1.1806215253692591 1.0530477143595962 1.053040823576734 1.2106555663385186 0.9911684252238111 1.068849777188355 1.0349907254142734 0.9796117127167179 1.0 12.703284633118281 -7.857290802938971 0.36674325891680654 0.9995376321657394 1.1495609580721267 0.45765617135695547 0.05416494750628985 0.8817638760586753 0.27078908134926377 0.02368079635621316 0.048119595095925644 1.3890222325309113e-08 7.857290802938971 0.15002332590638723 VDS(ph)TTCLFPVEEK ddPTM_A549_PD325901_60min_R1 1 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.989)T(0.011)TCLFPVEEK 185.87 3.0601999999999992e-25 217700000.0 4458.0 4738.8 5333.4 4988.8 5029.4 5043.9 4843.9 5550.1 3607.7 5068.0 5500.8 True False 4910.572878193858 5138.155306820045 5695.356596339587 5296.946845613145 4676.152294488077 5002.824150699713 5028.237265183788 5439.398901530778 3456.080915114697 4748.005615089709 4824.236472444209 1.0178963875926892 1.0650711954459373 1.1805716052418185 1.097986567588267 0.969304121221673 1.0370188483246183 1.0422866486551439 1.1275149824434074 0.7163995659946717 0.984198358063514 1.0 12.236084911066973 -8.744888083944227 24.998355363850486 0.8660775593622961 1.0668396802607674 0.4021251865864205 0.08805050333671095 175.17077407829643 264570.17962952354 0.0189375713976473 0.021443628970113045 1.7993345371371597e-09 8.744888083944227 0.20076212089847123 VDSEGDFS(ph)ENDDAAGDFR ddPTM_A549_MK2206_60min_R1 1 VDSEGDFSENDDAAGDFR 18 0 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 VDSEGDFS(1)ENDDAAGDFR 145.55 8.53e-17 15356000.0 614.87 617.05 459.01 549.57 690.34 469.22 640.77 552.75 940.51 1044.0 715.95 True False 718.6450238717941 648.4552093663557 524.1045200816424 684.2146746711346 588.7919004878686 518.8725489569719 757.1896147387749 631.1040052258801 727.4859866858508 808.1596749105104 538.1598557852193 1.335374640353343 1.2049490544407226 0.9738826009549355 1.2713967184951196 1.0940836522054826 0.964160636247931 1.4069975799922372 1.1727073256050429 1.3518027754492932 1.5017093271131108 1.0 9.071890966446743 -11.11093405827613 1.4770791417083853 1.0007167090803049 1.2104822349309359 0.0 0.20249701264590841 0.49441533218077555 1.940152360219778 0.10036145671888934 0.022108479493728156 7.745793982451613e-12 11.11093405827613 0.20976552585063102 VDSEGDFS(ph)ENDDAAGDFR ddPTM_A549_PD325901_60min_R1 2 VDSEGDFSENDDAAGDFR 18 0 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 VDS(0.008)EGDFS(0.992)ENDDAAGDFR;VDSEGDFS(1)ENDDAAGDFR 186.94 7.977999999999999e-40 53524000.0 2651.3 2606.9700000000003 2457.1800000000003 2948.9 3122.88 3187.6 2769.1000000000004 2305.3599999999997 3250.0 2678.7 3169.89 True False 2920.4580242160996 2826.6685110620124 2623.9390110236823 3131.0468555621824 2903.53968215114 3161.64124244541 2874.4796158096624 2259.377786280066 3113.413802179442 2509.5664248501994 2780.013625588311 1.050519320241845 1.0167822506495192 0.9438583274815425 1.1262703271461791 1.0444336155139127 1.137275448344732 1.0339804054742217 0.812721839016862 1.1199275332762357 0.9027173110776107 1.0 11.440876238661414 -6.245714274014094 24.705415178554453 1.0473420001282947 1.0050262159928554 0.0 0.09720030159351331 2188.394712317042 3438136.161317417 0.01252094000437254 0.03300920969567364 5.679181206253787e-07 6.245714274014094 -0.04231578413543935 VDSEGDFS(ph)ENDDAAGDFRS(ph)GDEEFKGEDELCDSGR ddPTM_A549_PD325901_60min_R1 1 VDSEGDFSENDDAAGDFRSGDEEFKGEDELCDSGR 35 2 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 2 VDS(0.017)EGDFS(0.983)ENDDAAGDFRS(0.997)GDEEFKGEDELCDS(0.003)GR 76.55199999999999 5.3209e-06 14710000.0 434.63 390.77 560.31 204.58 572.93 587.2 360.74 529.33 428.93 533.91 433.03 True False 478.753317642305 423.70155930743425 598.3360060177432 217.2164419651094 532.6893733012001 582.4180378855392 374.4681581045024 518.772097898648 410.9035637442548 500.19883148234953 379.7700552033369 1.26063998749446 1.1156792208921673 1.5755218133177498 0.571968323960685 1.402662916685169 1.5336070601293204 0.9860391912785337 1.3660163322273697 1.0819798931336184 1.3171097210772253 1.0 8.568982343516993 -8.946659768784025 8.150923535781246 1.0358793391855508 1.2212312096332247 0.0 0.2774794038944568 0.4427865548359028 59.48335398588386 0.043098049928606025 0.045540539231317186 1.1306813563757494e-09 8.946659768784025 0.18535187044767398 VDSEGDFSENDDAAGDFRS(ph)GDEEFKGEDELCDSGR ddPTM_A549_PD325901_60min_R1 1 VDSEGDFSENDDAAGDFRSGDEEFKGEDELCDSGR 35 2 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 VDSEGDFSENDDAAGDFRS(0.995)GDEEFKGEDELCDS(0.005)GR 87.09100000000001 1.929e-09 6844400.0 485.01 623.67 414.64 628.89 420.48 475.81 593.42 497.7 580.32 416.72 477.05 True False 534.2478581545088 676.2288596700555 442.77996383287297 667.735106987182 390.9469353772512 471.9351611143025 616.0029228318839 487.77298306190295 555.9311685171608 390.4082280821197 418.37587426910807 1.276956657904393 1.6163189640210731 1.0583305373580592 1.5960172372599117 0.9344394823440177 1.128017149504046 1.4723672198068907 1.1658726352565856 1.328784001917793 0.9331518667613252 1.0 8.708655850451725 -13.746858132652056 0.27960787394575765 1.2048619845257988e-10 1.3152395907235352 0.2683694940278618 0.20408895212708608 24.77427479243594 0.607641499398828 13.85484617199831 0.08240269645625958 1.7911908718274007e-14 13.746858132652056 1.315239590603049 VDSGTEKPGLVAPES(ph)PVRK ddPTM_A549_MK2206_60min_R1 2 VDSGTEKPGLVAPESPVRK 19 2 H7C1I9;O15021-2;O15021-3;O15021-6;O15021 H7C1I9 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 VDSGTEKPGLVAPES(1)PVRK;VDSGTEKPGLVAPES(1)PVRK 96.303 4.2515e-07 19846400.0 3063.6000000000004 3915.4 3912.2 3677.5 4418.2 3130.9 3621.0 3199.8 5617.9 4949.8 5020.4 True False 3580.6607821712387 4114.677135974442 4467.008787310521 4578.487665089249 3768.288632754148 3462.209759876781 4278.888829016813 3653.3814489765173 4345.454619942841 3831.636742214602 3773.6961240088185 0.9488471420341823 1.0903573050824762 1.183722440948741 1.2132634729013358 0.9985670570504426 0.9174585462379139 1.133872121232519 0.9681175507834769 1.1515115359438748 1.0153538113037657 1.0 11.881762539599361 -11.205558850088966 1.6479356087337904 0.9999819831893186 1.0812961905602343 0.038718804349819 0.095285310153375 0.8264562874129937 4.038926290212474 0.07167273781174521 0.014916224560911061 6.229327297538888e-12 11.205558850088966 0.08131420737091566 VDSGTEKPGLVAPES(ph)PVRK ddPTM_A549_PD325901_60min_R1 1 VDSGTEKPGLVAPESPVRK 19 2 H7C1I9;O15021-2;O15021-3;O15021-6;O15021 H7C1I9 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 VDSGTEKPGLVAPES(1)PVRK 67.36399999999999 0.00033552 11593000.0 1034.1 982.74 1043.8 1249.4 1574.7 1633.1 1501.2 1609.7 1839.6 1626.5 1460.9 True False 1139.0810707358157 1065.5589487263305 1114.6385448792998 1326.572600406724 1464.0985044200852 1619.8005750525788 1558.32898748816 1577.5932707147783 1762.2880093813235 1523.8025124197732 1281.2185614081122 0.889060699748151 0.8316761720617263 0.8699831382822506 1.0353991429446399 1.1427390677286007 1.2642656170016386 1.2162866152793572 1.2313225223500806 1.375478050711735 1.1893384613044093 1.0 10.32330088880635 -6.519425507670063 1.984007466442749 1.1945837129580028 0.8545276290969515 0.7543755038559975 0.0854178578472222 0.19857806408397596 1.544117490389277 0.019974124150522132 0.05383092707697362 3.023949208702048e-07 6.519425507670063 -0.34005608386105135 VDSLVS(ph)LSEEDLESDQR ddPTM_A549_MK2206_60min_R1 3 VDSLVSLSEEDLESDQR 17 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDS(0.076)LVS(0.847)LS(0.076)EEDLES(0.001)DQR;VDS(0.013)LVS(0.491)LS(0.445)EEDLES(0.051)DQR;VDS(0.026)LVS(0.951)LS(0.023)EEDLESDQR 71.344 0.0010402 9765700.0 696.8199999999999 955.93 999.4100000000001 1068.07 1114.53 878.12 1010.6800000000001 919.3399999999999 1543.9099999999999 1335.65 1190.63 True False 814.426180386656 1004.5827538928447 1141.1413660155424 1329.7471979474847 950.5841134089636 971.0420755511199 1194.3074735461778 1049.6592603606705 1194.2168501176507 1033.9257373507887 894.9637112836875 0.9100102832309113 1.122484343473464 1.2750699851044809 1.4858113029411744 1.0621482205635995 1.0850072056645845 1.3344758658796654 1.172851197346422 1.3343746065465947 1.1552711292257667 1.0 9.805685375377923 -11.034384510081816 1.3417485368389566 1.0004956550266828 1.2175472772667322 0.04005264407479914 0.15694853146882656 0.5541505540810364 1.7846335179269615 0.10779916708779742 0.024439993774379023 9.238798388382809e-12 11.034384510081816 0.21705162224004937 VDSLVS(ph)LSEEDLESDQR ddPTM_A549_PD325901_60min_R1 1 VDSLVSLSEEDLESDQR 17 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDSLVS(0.944)LS(0.056)EEDLESDQR 377.05 3.3608999999999983e-273 10173000.0 2491.8 3205.4 2682.7 2999.7 2797.2 3445.3 2868.2 2844.7 2795.0 3508.6 3445.1 True False 2744.765701633793 3475.5303073522778 2864.764154385608 3184.9846561870113 2600.734321816131 3417.242619085575 2977.3509205392634 2787.9602268760223 2677.535869874319 3287.066397218578 3021.37454028824 0.9084493382180753 1.1503142894097171 0.9481658484195438 1.0541508885168414 0.8607785255144237 1.1310225109527694 0.9854292742717106 0.9227456542379052 0.8861979321566935 1.0879374117268463 1.0 11.560989321400362 -8.007938969539701 24.881372982937044 0.9435232030767126 1.0120210570745412 0.0 0.09558583209810428 572.986716724886 1795791.2993650965 0.013073374581688791 0.017643033319834182 9.81885915620429e-09 8.007938969539701 0.0684978539978286 VDSLVS(ph)LSEEDLESDQREHR ddPTM_A549_MK2206_60min_R1 1 VDSLVSLSEEDLESDQREHR 20 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDS(0.003)LVS(0.824)LS(0.172)EEDLESDQREHR 65.47 0.00070176 1542700.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 113.86 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 85.58541962386352 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 6.419293134177167 -10.632928445752034 0.679319263200112 1.082152444714398 6.834839394132852e-26 0.0 0.29327865860305147 0.06440817340675754 0.046900237562256634 0.039956722371451286 0.008142451977166855 2.328474864986929e-11 10.632928445752034 -1.082152444714398 VDSLVS(ph)LSEEDLESDQREHR ddPTM_A549_PD325901_60min_R1 2 VDSLVSLSEEDLESDQREHR 20 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDSLVS(0.996)LS(0.003)EEDLESDQREHR;VDS(0.001)LVS(0.987)LS(0.012)EEDLESDQREHR 107.08 4.057e-10 6061500.0 375.48 106.38 121.68 0.0 155.67 353.38 277.84000000000003 130.24 295.209 283.4 336.96000000000004 True False 413.59845318623326 115.34501594064248 129.93793652128116 0.0 144.73627623234563 350.5021904427654 288.41335323988176 127.64226102869652 282.802392346951 265.50607563465337 295.5160561654306 1.3995803089450403 0.39031725530362404 0.43969839814233846 0.0 0.4897746610130785 1.186068178463215 0.9759650862368956 0.43193003684795417 0.956978094579868 0.8984489001369944 1.0 8.207092707727266 -7.240457908822327 23.606037031498648 0.9461539682953497 0.4993403172797149 0.19663407446732784 0.3571953451565839 412.79953311031 464435.83114091074 0.050954796189101134 0.08817970973188001 5.7483352815963903e-08 7.240457908822327 -0.4468136510156348 VDSLVSLS(ph)EEDLESDQR ddPTM_A549_MK2206_60min_R1 2 VDSLVSLSEEDLESDQR 17 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDSLVSLS(1)EEDLESDQR;VDSLVS(0.006)LS(0.994)EEDLESDQR 232.78 2.8133999999999997e-64 20144700.0 4161.8 4102.8 3886.1000000000004 3295.4 6308.6 4527.1 4321.0 3887.0 6904.0 5709.5 6087.299999999999 True False 4864.21009375906 4311.6149955243245 4437.207414847759 4102.773147936127 5380.613296951887 5006.15471715423 5106.069768070046 4437.994153438255 5340.255023422519 4419.719984580038 4575.655409066787 1.0630630278933362 0.9422945152252377 0.9697424779967718 0.8966525625610638 1.1759218769599769 1.094084730951198 1.1159209581106628 0.9699144180840733 1.1671016599809192 0.9659206363797067 1.0 12.159762692034134 -6.753960340973264 24.999978356712347 1.0818322305924486 0.9662353493310466 0.2813921124854293 0.07680931520768078 157.66234091953194 527008.7722066323 0.01114914506536945 0.02285911571053781 1.7621369543870306e-07 6.753960340973264 -0.115596881261402 VDSLVSLS(ph)EEDLESDQR ddPTM_A549_PD325901_60min_R1 3 VDSLVSLSEEDLESDQR 17 0 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDSLVSLS(1)EEDLESDQR;VDSLVSLS(1)EEDLESDQR;VDSLVS(0.248)LS(0.752)EEDLESDQR 287.85 1.3158999999999998e-116 62467000.0 12376.599999999999 11886.100000000002 13816.599999999999 13468.5 15308.0 13443.5 14258.8 15707.6 14258.999999999998 15586.300000000001 15036.3 True False 13633.063320828633 12887.783361271582 14754.277561965268 14300.418655817168 14232.81888973308 13334.020593178222 14801.426436714755 15394.299595626188 13659.743817008202 14602.178358025394 13186.930422959003 1.0338314439797827 0.9773148828353114 1.1188561013621068 1.0844387736299521 1.0793125036098727 1.0111542387425605 1.1224315259102942 1.1673906740892528 1.0358546969525229 1.1073220142727367 1.0 13.686821161049393 -8.983148366408031 16.75921307137998 1.0158148696198084 1.0744041815391208 0.0 0.05780105077623589 3.4586467827551277 3440.3683868743155 0.009377152830867897 0.00955278405272492 1.0395649624487589e-09 8.983148366408031 0.05858931191931238 VDSLVSLS(ph)EEDLESDQREHR ddPTM_A549_MK2206_60min_R1 2 VDSLVSLSEEDLESDQREHR 20 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDSLVS(0.12)LS(0.855)EEDLES(0.025)DQREHR;VDSLVS(0.003)LS(0.991)EEDLES(0.005)DQREHR 91.12799999999999 1.5234e-06 8283100.0 240.81 313.42999999999995 226.54000000000002 286.73 229.5 0.0 0.0 104.26 344.19 239.54 608.86 True False 281.45284076075734 329.38224823222896 258.6667784564505 356.9788628717987 195.74085401681168 0.0 0.0 119.03917428285888 266.2315145584874 185.42774763224483 457.66325831886115 0.6149780119877238 0.7197043726912926 0.5651901780505905 0.7800033242412611 0.42769623835618453 0.0 0.0 0.2601020993472944 0.5817192219808909 0.40516197064491993 1.0 8.838142665307693 -9.876173028899922 0.9948639246695504 0.9401253486939183 0.43144964792696355 0.0029973499725005626 0.29661118662776914 0.38573788915226204 0.7801650558475618 0.09716618928991784 0.05577489033843095 1.329924452203282e-10 9.876173028899922 -0.5086757007669547 VDSLVSLS(ph)EEDLESDQREHR ddPTM_A549_PD325901_60min_R1 2 VDSLVSLSEEDLESDQREHR 20 1 Q12802;Q12802-2;A0A087WTD7;A8MYJ1;A0A087WY36;H0YMW2;H0YLH1;Q12802-4 Q12802;Q12802-4 AKAP13 A-kinase anchor protein 13 1 VDSLVS(0.001)LS(0.999)EEDLESDQREHR;VDSLVS(0.16)LS(0.837)EEDLES(0.003)DQREHR 109.85 2.3528e-10 16074800.0 590.5 592.99 471.35 426.26 457.07 610.5699999999999 507.63 611.03 633.5799999999999 546.95 691.7 True False 650.4471252968755 642.9633483985859 503.3386454578063 452.5891120933011 424.96698000589856 605.5977203538383 526.9481374357945 598.8425273062378 606.9528359338001 512.415483656929 606.6252850475679 1.0722387301180025 1.0599019926249342 0.8297356834018838 0.7460768999396584 0.7005428070354424 0.998306096499672 0.8686550831696281 0.9871704033228358 1.0005399558744184 0.8446985252465177 1.0 9.244661822673311 -8.326090766080583 5.339050638634003 0.9998001272737043 0.8908200665842012 0.015752168772951936 0.120073085556519 0.30975127470130104 17.721618688234248 0.019313370470454234 0.023500630790360383 4.71964391990646e-09 8.326090766080583 -0.10898006068950306 VDSPLPSDKAPT(ph)PPGK ddPTM_A549_MK2206_60min_R1 2 VDSPLPSDKAPTPPGK 16 1 Q12893 Q12893 TMEM115 Transmembrane protein 115 1 VDSPLPS(0.005)DKAPT(0.995)PPGK;VDSPLPSDKAPT(1)PPGK 106.03 3.3167e-07 111160000.0 10394.9 10411.2 9802.5 9121.599999999999 14250.7 12697.3 10985.0 13460.5 15777.6 13804.9 14458.099999999999 True False 12149.304989095115 10941.085610169353 11192.641899087823 11356.39240948419 12154.440907788145 14040.9198582144 12980.832307856863 15368.567096052378 12203.998791649923 10686.363502080554 10867.754746739689 1.1179222638180981 1.0067475633319443 1.029894597358815 1.04496215401724 1.11839484705288 1.2919798233785738 1.194435521444859 1.4141437172809708 1.1229549319109455 0.983309225420867 1.0 13.407766293205524 -4.9036870761579285 19.031626817322408 1.1020203749970363 2.2028053760607214 0.0 0.12961049454602622 4818.569633507824 1040961.0697672546 0.018671588471952275 21363.952668339007 1.2482826200732407e-05 4.9036870761579285 1.100785001063685 VDSPLPSDKAPT(ph)PPGK ddPTM_A549_PD325901_60min_R1 2 VDSPLPSDKAPTPPGK 16 1 Q12893 Q12893 TMEM115 Transmembrane protein 115 1 VDSPLPSDKAPT(1)PPGK;VDSPLPSDKAPT(1)PPGK 111.13 1.6340999999999998e-07 153274000.0 12566.5 13148.8 14028.3 12679.6 16041.4 13377.3 12726.6 13810.2 14350.8 13958.8 16462.8 True False 13842.241829031647 14256.895521717615 14980.344797020785 13462.790094539061 14914.707403825725 13268.359704029685 13210.917727262737 13534.744727107682 13747.685782251305 13077.438985776293 14437.979966287541 0.9587381241249169 0.9874577714477542 1.0375651463708675 0.9324566266177448 1.0330189845567963 0.9189900342714907 0.9150115014780478 0.9374403315914761 0.9521890052730325 0.9057665280262135 1.0 13.817581286838188 -4.916707242770191 11.936655671940768 0.971907902508529 0.8287901696025671 0.0 0.04534898697516223 1339338.486855614 5461270.459553156 0.005640765501224253 4647576.937752986 1.211414470970548e-05 4.916707242770191 -0.14311773290596186 VDSPT(ph)VNTTLR ddPTM_A549_MK2206_60min_R1 1 VDSPTVNTTLR 11 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 VDS(0.33)PT(0.658)VNT(0.011)T(0.001)LR 129.34 1.0995999999999999e-07 11199000.0 1899.4 2059.6 1995.8 1969.2 2710.1 2190.5 2198.1 1989.4 3070.3 2676.0 2519.2 True False 2219.9722841284915 2164.424842737129 2278.834450619686 2451.6540884007463 2311.447880047761 2422.297256063782 2597.4663173327394 2271.403542281982 2374.8819522616086 2071.4897414372845 1893.6131136170475 1.1723473333409988 1.1430132307241978 1.2034319123756043 1.2946964038064608 1.220654770198858 1.2791933255240713 1.3716985263009933 1.1995077167285273 1.2541537313951503 1.0939350422433807 1.0 10.886925886808793 -10.63857195221871 0.8061068943859648 0.9923242498715779 1.2400061228753678 0.5440404174867464 0.06542202854347433 0.33042786389985107 0.3642753386310628 0.0508904427482344 0.012135464541104441 2.298412885620845e-11 10.63857195221871 0.24768187300378997 VDST(ph)TCLFPVEEK ddPTM_A549_MK2206_60min_R1 2 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.336)T(0.642)T(0.022)CLFPVEEK;VDS(0.32)T(0.664)T(0.016)CLFPVEEK 175.74 6.044299999999999e-22 35730000.0 3120.1000000000004 3776.1 3516.5 2828.7 4465.0 3759.1000000000004 3087.4 3243.2 4879.0 4297.2 5133.8 True False 3646.6966008788622 3968.2873609728463 4015.19257721421 3521.7316269851667 3808.2044147497327 4156.8854669113725 3648.340616047089 3702.9335318834437 3773.9142901620007 3326.459535464987 3858.935774328037 0.9450005945004015 1.028337239342588 1.040492200965273 0.9126173206648954 0.9868535361703089 1.0772103268899877 0.9454266226243117 0.9595737655230195 0.9779676343069376 0.8620147444781532 1.0 11.913987317442652 -11.063373312161032 1.4448041529523674 0.9998403038734945 0.9862265277370124 0.0 0.06134513800187934 2.3473515870391726 8.907908325937278 0.029816214852144123 0.006956541364638514 8.642247265059302e-12 11.063373312161032 -0.01361377613648218 VDSTT(ph)CLFPVEEK ddPTM_A549_PD325901_60min_R1 1 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.055)T(0.055)T(0.89)CLFPVEEK 261.41 1.5758e-70 158060000.0 9184.9 9544.0 11388.0 9313.2 8743.8 9340.5 10420.0 11264.0 7657.6 9092.4 10257.0 True False 10117.344286433998 10348.30637467091 12160.858161607088 9888.455212188173 8129.665652472437 9264.434064832905 10816.53880204279 11039.330683562937 7335.777702021317 8518.304312281305 8995.454024480125 1.124717469390736 1.1503928925109448 1.351889313036637 1.0992724975613066 0.9037526766685104 1.0299017747876629 1.2024450097356718 1.2272121733400705 0.8154983263832839 0.9469565726309856 1.0 13.134980384630826 -8.760855115757204 24.99999967082284 0.9128742080052575 1.1335468551845618 0.41130162145829874 0.11461888918427057 12.117311283139715 518487.26224446733 0.02237201754222034 0.02463052445098327 1.734382505646476e-09 8.760855115757204 0.22067264717930424 VDT(ph)TPNQGK ddPTM_A549_MK2206_60min_R1 1 VDTTPNQGK 9 0 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 VDT(0.5)T(0.5)PNQGK 132.85 5.0351000000000006e-05 22096000.0 3714.9 4384.9 3636.4 3365.5 5121.9 4006.6 3638.2 3811.7 4966.3 5242.8 4522.7 True False 4341.884299415042 4608.072680577802 4152.096200137002 4190.047651083034 4368.4752949399 4430.575752634167 4299.213846376404 4352.020147841674 3841.4409795514566 4058.4478387172608 3399.5887698300317 1.277179268842014 1.355479439593569 1.2213524873905832 1.2325160290762234 1.2850010959291143 1.3032681458280264 1.2646276174724953 1.280160761343867 1.129972252421435 1.193805519871796 1.0 11.731144526434365 -9.189500564232652 0.8304522417899911 1.0244989285998505 1.2842614087702986 0.5080148025380979 0.06496411726751962 0.12834118120741855 0.1888180482448857 0.012487246219102213 0.010125448018630998 6.463971542038818e-10 9.189500564232652 0.2597624801704481 VDTT(ph)PNQGK ddPTM_A549_MK2206_60min_R1 1 VDTTPNQGK 9 0 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 VDT(0.081)T(0.919)PNQGK 135.8 4.7758999999999995e-05 21196000.0 2820.9 3025.2 3042.3 2755.5 3344.1 3327.2 3080.2 3146.5 3902.6 3882.7 4441.3 True False 3296.9989556165424 3179.169758326066 3473.7438867222504 3430.597623699097 2852.1873199024844 3679.282095583387 3639.832469245396 3592.526010752114 3018.667331171599 3005.5953733477386 3338.4026363557446 0.9875977569966219 0.9523026742503715 1.040540721149875 1.027616497285059 0.8543568977695211 1.102108552010896 1.090291635169177 1.0761212478174216 0.9042250620994076 0.9003094296105326 1.0 11.704942249681046 -8.767370342041191 24.999959473133902 0.9547729506720035 1.0153341638288613 0.192329939746832 0.07125660104126764 228.00263370994847 961065.611971892 0.012902685623161806 0.013916891392565453 1.708557731243408e-09 8.767370342041191 0.06056121315685781 VDTT(ph)PNQGK ddPTM_A549_PD325901_60min_R1 2 VDTTPNQGK 9 0 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 VDT(0.012)T(0.988)PNQGK;VDT(0.102)T(0.898)PNQGK 140.61 4.346899999999999e-05 128399000.0 19198.9 19349.1 20456.6 19261.1 22359.0 20863.0 21376.0 21150.0 23271.0 20792.1 22502.0 True False 21147.958194516836 20979.716562672358 21844.90789152893 20450.81440186807 20788.580974362536 20693.098645105594 22189.475377396022 20728.146658145983 22293.000797082383 19479.283257598006 19734.39665193056 1.0716293265772576 1.0631040275872823 1.106945820377635 1.0363029973793205 1.0534186243960413 1.0485802535585118 1.124406069704963 1.0503562396025017 1.129652007623021 0.9870726529504718 1.0 14.268424791328028 -11.068534062240916 1.3958270520390725 1.0001823797902256 1.0813696041103003 0.5053313963586809 0.030791264365347952 0.3077922728179307 1.0741988249999388 0.023141601486280867 0.005166197570615024 8.540158632958036e-12 11.068534062240916 0.08118722432007464 VDTT(ph)PNQGKK ddPTM_A549_MK2206_60min_R1 2 VDTTPNQGKK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 VDT(0.131)T(0.869)PNQGKK;VDT(0.127)T(0.873)PNQGKK 65.395 0.0034475 34005000.0 8428.8 9039.1 9992.2 8863.1 10977.400000000001 9396.8 9345.9 9464.7 12397.5 12703.0 12235.7 True False 9851.375375625057 9499.151580882304 11409.24421158534 11034.559897879682 9362.639001673851 10391.163138908978 11043.929054710912 10806.350209428101 9589.486044739375 9833.383477383348 9197.238001859365 1.071123240872254 1.0328265484661703 1.2405076621132107 1.1997688757917186 1.0179837685815076 1.1298134436456078 1.2007875682327902 1.1749560256289366 1.0426484606357593 1.0691670124656312 1.0 13.166984958953362 -8.898527093556936 4.8873539832085235 1.0183085944949226 1.133967129701826 0.2711529304245436 0.06911702726406228 0.16932292917559735 6.53135790343687 0.012343116692493978 0.01301339446454874 1.2632022961956136e-09 8.898527093556936 0.11565853520690328 VDVEVPDVS(ph)LEGPEGK ddPTM_A549_PD325901_60min_R1 2 VDVEVPDVSLEGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDVEVPDVS(1)LEGPEGK;VDVEVPDVS(1)LEGPEGK 180.62 1.4655999999999997e-29 5126600.0 3383.3 3063.4 3830.3 3653.7 4031.9 3204.2 3071.1000000000004 3412.8 3603.4 3838.9 3716.9 True False 3726.770125346182 3321.563469003234 4090.2471914650155 3879.380750845247 3748.7132532998953 3178.1060575491233 3187.9723910704024 3344.729026710192 3451.9616291610473 3596.511198849227 3259.7448633703984 1.143270495560473 1.018964246658531 1.2547752547835669 1.1900872348746272 1.1500020432347366 0.9749554614722623 0.9779821810269571 1.0260708021338592 1.0589668130014038 1.103310642272362 1.0 11.670543335390011 -7.247302556900841 23.530991043086424 1.0208850211711815 1.151951388299815 0.5120759576918532 0.0621210633526577 220.87035935608793 367641.8528841 0.00869645820096455 0.01500716319691636 5.658449484481645e-08 7.247302556900841 0.1310663671286334 VDVGKDQEFTVK ddPTM_A549_MK2206_60min_R1 2 VDVGKDQEFTVK 12 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 121.76 1.2262e-05 8244000.0 6079.200000000001 6961.6 6803.4 5767.4 7985.5 6394.8 5807.4 5706.9 9169.8 8310.099999999999 8230.1 False True 7105.220337829805 7315.915704602254 7768.224421959099 7180.413258908422 6810.843528327887 7071.493491475306 6862.529407796805 6515.870551648254 7092.8549411616195 6432.842638384893 6186.339030795354 1.1485339394527678 1.1825921062819078 1.2557062235498542 1.16068861133614 1.1009489609967662 1.1430821130677913 1.109303802076705 1.053267614208097 1.1465351164644655 1.0398464433265706 1.0 12.594870184472116 -14.999999999984901 0.12073346086723369 0.514867376860296 1.2235929514145867 0.628620378410758 0.04180223028361577 39.039472310920864 0.3278726424310572 4.657106670208 0.16860624293139248 1.0000000000347668e-15 14.999999999984901 0.7087255745542906 VDVGKDQEFTVK ddPTM_A549_PD325901_60min_R1 2 VDVGKDQEFTVK 12 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 121.24 1.3447e-05 14225100.0 8480.2 8823.0 8586.6 9177.3 10183.0 10398.4 10356.5 10141.3 10901.5 9410.8 11409.3 False True 9341.103661206715 9566.545174321196 9169.338311420388 9744.160977839465 9467.781209442895 10313.718877978528 10750.62227479425 9939.02381580405 10443.347865987445 8816.600481942827 10006.02842951166 0.9335475835403562 0.956078152457147 0.9163813970762318 0.9738290318164752 0.9462077062982087 1.0307505071202245 1.0744145242568464 0.9933035755215339 1.0437055960370811 0.8811288658684251 1.0 13.288581836038997 -7.258168418830163 24.540091453099976 1.023954680882928 0.945801117664474 0.20639724830517037 0.04936139844919551 98.06137572460302 735694.7329858973 0.0038236831026251315 0.006450477309646055 5.5186338588178465e-08 7.258168418830163 -0.07815356321845413 VDVKS(ph)PK ddPTM_A549_MK2206_60min_R1 8 VDVKSPK 7 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK 75.294 0.0050742 4118089700.0 65917.4 73683.6 65951.20000000001 63602.9 76178.20000000001 55956.2 59274.0 56741.2 83621.4 75634.0 76705.09999999999 True False 77042.6455942988 77433.7805118983 75304.07186076214 79185.61335524276 64972.4876926513 61877.447943280575 70043.31854491655 64784.43886263718 64681.28641593621 58548.226869905724 57657.106716936636 1.3362211526244987 1.3430049636734946 1.306067476303693 1.373388604877431 1.1268773511586176 1.0731972425717335 1.2148254141295907 1.1236158480981653 1.1218267807554803 1.015455512836327 1.0 15.8152108225242 -2.000000008704794 0.12310251619505647 0.9310784432445197 2.4100082004977024 0.7765664228665754 0.0613795767184795 26.658258171145388 0.2161917655002631 0.207926794406815 6.830409896901476 0.009999999799564709 2.000000008704794 1.4789297572531828 VDVKS(ph)PK ddPTM_A549_PD325901_60min_R1 8 VDVKSPK 7 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK 81.017 0.0078341 6040409500.0 79424.92000000001 82883.90000000001 84764.00000000001 86519.40000000001 95476.8 77876.4 86115.40000000001 87095.8 89549.1 91248.19999999998 96465.09999999999 True False 87488.07940886437 89868.8171340724 90516.5947673397 91863.50683818603 88770.83894507872 77242.20041823814 89392.56867115498 85358.60594366671 85785.66274238378 85486.77307948483 84600.50424265153 1.0341318907264512 1.0622728308605616 1.0699297312427314 1.0858505828133451 1.0492944426249025 0.9130229318337362 1.0566434499581567 1.0089609596042217 1.014008882220524 1.0104759285392828 1.0 16.368378641785984 -7.01945413481142 24.964604847117133 1.004319273590558 1.0639939285716835 0.43663868702517716 0.03391498235468157 513.3989696588458 658821.9868373718 0.0045836480927025905 0.008019598294127404 9.561936718666408e-08 7.01945413481142 0.05967465498112556 VDVKSPK ddPTM_A549_PD325901_60min_R1 2 VDVKSPK 7 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 60.973 0.028686 10095500.0 6848.6 6641.6 6848.299999999999 6619.2 7575.8 6827.1 7461.6 6909.9 6756.1 7482.7 8245.8 False True 7543.864830327154 7201.310940697228 7313.0668201733215 7028.052950706088 7043.701943091183 6771.502361117788 7745.555271144188 6772.076623788313 6472.164611970621 7010.241044994431 7231.6188744328965 1.0431778777775735 0.9958089697117721 1.0112627541847345 0.9718505735352692 0.9740145416116872 0.9363743414435414 1.0710679594203025 0.936453751418057 0.8949814314541249 0.9693875142921127 1.0 12.820102930549233 -5.342528340794877 0.4963253338852 0.9546060303907264 1.086161520715515 0.19289617119555436 0.04291509526421234 4.859474672413794 0.82933159664773 0.010185962993858932 0.36519020350520515 4.544348811431253e-06 5.342528340794877 0.13155549032478864 VDVS(ph)CEPLEGVEK ddPTM_A549_MK2206_60min_R1 2 VDVSCEPLEGVEK 13 0 Q12888;Q12888-3;Q12888-2;A6NNK5;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 VDVS(1)CEPLEGVEK;VDVS(1)CEPLEGVEK 121.28 9.2296e-06 5363200.0 1757.62 2197.3 2039.86 2372.3 2940.7 2326.8 2236.76 2565.2 3035.8999999999996 3064.9 2911.9 True False 2054.263286316688 2309.1331845728764 2329.1428211449393 2953.513606496594 2508.1269255217353 2573.020431595164 2643.1503389095965 2928.8249555955267 2348.273497336098 2372.5369613345056 2188.7948656484127 0.9385362322239044 1.0549792585925197 1.0641211096111327 1.349378899251776 1.1458940099344226 1.1755420628844209 1.2075824831243767 1.3380993356487456 1.0728613878763102 1.0839466953115593 1.0 11.09592103580982 -8.97954538985638 16.911267292879767 1.032138591347136 1.1634644172799111 0.14986043209257716 0.11418100874294097 4.596278342609072 3800.68345685027 0.020652675653428376 0.021205319323837214 1.0482252336367631e-09 8.97954538985638 0.1313258259327752 VDYESQSTDTQNFS(ph)SESKR ddPTM_A549_PD325901_60min_R1 2 VDYESQSTDTQNFSSESKR 19 1 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 1 VDYESQSTDTQNFS(0.965)S(0.034)ES(0.001)KR;VDYESQSTDTQNFS(0.937)S(0.063)ESKR 222.69 5.125999999999998e-75 50916000.0 19018.4 18458.3 19342.6 17537.4 20776.5 19453.2 18689.5 20148.0 19191.0 18364.5 19858.3 True False 20949.133967393915 20013.845720409474 20655.30515250273 18620.645367674788 19317.230315033925 19294.7795888879 19400.73914978681 19746.132334199763 18384.469008500204 17204.962335894823 17415.854992135475 1.2028771471084234 1.1491738837655217 1.186005806882872 1.0691777909315026 1.109174962914945 1.107885865930837 1.113969952009112 1.1338020638732107 1.055616793823911 0.987890766411647 1.0 14.088113680073027 -2.0000000000051372 0.054511424434102014 0.780525908681532 1.7598815264480852 0.7874010014095104 0.030251055359480132 104.59793338814119 0.4167044242358927 1.6249890849302195 8.318430948795523 0.009999999999881711 2.0000000000051372 0.9793556177665531 VEAEAGGSGART(ph)PPLSR ddPTM_A549_MK2206_60min_R1 2 VEAEAGGSGARTPPLSR 17 1 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 VEAEAGGS(0.014)GART(0.983)PPLS(0.003)R;VEAEAGGS(0.016)GART(0.981)PPLS(0.003)R 65.16 0.00099445 38428000.0 3393.0 3911.7 3466.7999999999997 3324.4 4560.0 2891.0 3335.1 3455.3999999999996 5022.799999999999 4642.7 5649.1 True False 3965.6554491144398 4110.788821778418 3958.4443698809123 4138.878149237989 3889.2300405954757 3196.9237011095142 3941.044499766353 3945.213531718691 3885.1438197634134 3593.9108455048136 4246.272562771541 0.9339144839364851 0.9680934892920081 0.9322162700025165 0.9747085445067485 0.9159162496288218 0.7528776483021813 0.9281185890700419 0.9291003988551435 0.9149539419173746 0.8463683836534198 1.0 12.051981263615755 -10.549896839320692 0.7925984069784958 1.0014446337181067 0.9159638188719945 0.0 0.07140320007666026 0.8287260215944836 0.9087869413145441 0.04250681052522764 0.011118012894145194 2.819052478873238e-11 10.549896839320692 -0.08548081484611214 VEAEAGGSGART(ph)PPLSR ddPTM_A549_PD325901_60min_R1 4 VEAEAGGSGARTPPLSR 17 1 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 VEAEAGGS(0.037)GART(0.962)PPLS(0.001)R;VEAEAGGS(0.003)GART(0.996)PPLSR;VEAEAGGS(0.096)GART(0.901)PPLS(0.004)R;VEAEAGGS(0.048)GART(0.949)PPLS(0.003)R 101.62 6.493899999999999e-09 278602000.0 11450.7 12623.5 12620.199999999999 12732.0 13937.3 13197.7 11562.300000000001 12135.0 14964.2 14334.2 15601.5 True False 12613.166634440197 13687.326647177106 13476.682663427615 13518.426723530032 12958.392129074782 13090.222306883483 12002.309653633336 11892.95790527667 14335.306713407263 13429.136165710124 13682.614406056999 0.9218389307862552 1.0003443962520804 0.9849493863878659 0.9880002697105691 0.9470698906298478 0.95670475819948 0.8771941748442588 0.8692021533554226 1.047702309513402 0.9814744293141328 1.0 13.74005629912142 -8.790375419584306 24.999372556390814 1.0225260973188823 0.9463391137166999 0.30825115757058985 0.043073804587619384 162.4933719345809 140385.85723552248 0.007971811246823519 0.00848730042063812 1.6204087528474317e-09 8.790375419584306 -0.07618698360218246 VEAIPNCKSEEETSPLVT(ph)HQNPAGPVASAPELESK ddPTM_A549_MK2206_60min_R1 1 VEAIPNCKSEEETSPLVTHQNPAGPVASAPELESK 35 1 P43007-2;P43007 P43007-2 SLC1A4 Neutral amino acid transporter A 1 VEAIPNCKS(0.05)EEET(0.196)S(0.121)PLVT(0.632)HQNPAGPVAS(0.001)APELESK 57.427 0.0014005 1655100.0 582.67 661.5 307.51 362.33 541.45 533.57 458.66 607.67 955.95 781.47 796.51 True False 681.0104510862109 695.1675245050553 351.1195419932153 451.1008662656118 461.8034222544779 590.0320232448992 541.9925850087961 693.8090834113261 739.4288513384638 604.9353842455135 598.7145844423288 1.1374542541343573 1.1611000342551658 0.5864556353178948 0.7534489354151754 0.7713248253082452 0.9854979961687137 0.9052603679491685 1.1588311049038045 1.2350272910542224 1.010390259340315 1.0 9.225724603904442 -8.24944426459601 18.11820425640884 1.1176745603133562 0.8907475719123519 0.24614043223400006 0.16778556450358162 20.46821962031745 30914.920645589566 0.029368490476093922 0.0376155268760537 5.6306137352637735e-09 8.24944426459601 -0.22692698840100434 VEAKEESEES(ph)DEDMGFGLFD ddPTM_A549_PD325901_60min_R1 2 VEAKEESEESDEDMGFGLFD 20 1 F8VWS0;P05388;P05388-2;Q8NHW5;F8W1K8 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like 1 VEAKEES(0.007)EES(0.993)DEDMGFGLFD;VEAKEES(0.005)EES(0.995)DEDMGFGLFD 140.87 2.0292e-21 20834000.0 1463.3400000000001 1834.68 1608.33 2027.42 1790.48 1768.26 1563.62 1918.98 1990.42 1830.38 1587.87 True False 1611.897199546028 1989.29492241002 1717.4809454739643 2152.6491287951017 1664.7228616206737 1753.8598768247348 1623.124414745694 1880.7044384893136 1906.7695692720015 1714.8094944253942 1392.572056337257 1.1574964413587618 1.428504121820643 1.2333156748752252 1.5458080743462563 1.195430321931942 1.2594392289026228 1.1655586562715008 1.3505257626926268 1.3692430209228719 1.2313973173752215 1.0 10.44353626402695 -10.811040222889481 0.9294676288288417 0.9896024415999305 1.306596152558276 0.1509733048277927 0.13101812477362876 0.39344377028205296 0.5706211528868433 0.08758629387145707 0.019113990780044193 1.5451113299136177e-11 10.811040222889481 0.3169937109583456 VEANS(ph)PLPK ddPTM_A549_PD325901_60min_R1 2 VEANSPLPK 9 0 Q9H7C4-2;Q9H7C4 Q9H7C4-2 SYNC Syncoilin 1 VEANS(1)PLPK;VEANS(1)PLPK 109.24 3.9882999999999996e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VEAPETNIDKT(ph)PK ddPTM_A549_MK2206_60min_R1 2 VEAPETNIDKTPK 13 1 O75152;E9PBY7;E9PQ61 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 VEAPET(0.02)NIDKT(0.98)PK;VEAPET(0.03)NIDKT(0.97)PK 95.76700000000001 6.6719e-05 22641000.0 10566.9 10817.4 10504.1 10477.6 13996.3 10049.4 10781.2 10923.7 14739.400000000001 14835.099999999999 14662.1 True False 12350.334384098856 11367.959455148872 11993.739328967951 13044.612470357339 11937.462810786496 11112.820837748162 12740.004485886786 12472.167927428207 11400.94943398521 11483.84060657558 11021.09591662611 1.12060855631131 1.0314726902974771 1.0882528760932513 1.1836039327702983 1.0831466218144405 1.0083226678921902 1.155965303474728 1.1316631323943975 1.034466038607473 1.0419871756357177 1.0 13.427980069417654 -8.917260930841417 4.74154014805422 1.0146979992291223 1.098533074305 0.3173418527038403 0.04876068077793735 0.16297752841510668 6.329810469495504 0.008682117106637048 0.009117194617623642 1.2098710059256725e-09 8.917260930841417 0.08383507507587762 VEAPETNIDKT(ph)PK ddPTM_A549_PD325901_60min_R1 1 VEAPETNIDKTPK 13 1 O75152;E9PBY7;E9PQ61 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 VEAPET(0.002)NIDKT(0.998)PK 96.666 6.5626e-05 22009000.0 7503.0 6580.1 6053.0 6349.7 8069.2 6846.0 7192.8 6545.5 6221.6 7408.9 7286.1 True False 8264.699036583334 7134.62811986296 6463.792979645916 6741.906547784998 7502.44722922878 6790.24844578407 7466.525940051183 6414.944867654584 5960.127788196804 6941.100789589218 6389.955890393357 1.2933890590713562 1.1165379295636675 1.0115551798039115 1.0550787303431568 1.174100002866677 1.0626440248190934 1.1684784790574752 1.003910665064026 0.9327337919745652 1.0862517533218736 1.0 12.641590257003308 -8.40850796380893 4.982927403195784 0.9682257723527635 1.117509491705446 0.3085207876048187 0.08047401380604854 0.14847982042669655 5.557040516911473 0.012033325069098384 0.014550970381986042 3.903840238344334e-09 8.40850796380893 0.14928371935268248 VEDQSIWPSMDDDEEESGAKVDSPLPSDKAPT(ph)PPGK ddPTM_A549_PD325901_60min_R1 3 VEDQSIWPSMDDDEEESGAKVDSPLPSDKAPTPPGK 36 2 Q12893 Q12893 TMEM115 Transmembrane protein 115 1 VEDQSIWPS(0.005)MDDDEEES(0.005)GAKVDS(0.015)PLPS(0.021)DKAPT(0.955)PPGK;VEDQSIWPSMDDDEEESGAKVDS(0.006)PLPS(0.006)DKAPT(0.987)PPGK;VEDQS(0.001)IWPS(0.009)MDDDEEES(0.009)GAKVDS(0.029)PLPS(0.056)DKAPT(0.897)PPGK 67.829 0.00015912 20353700.0 2979.19 3011.23 3138.37 3506.6000000000004 3471.69 3845.6400000000003 3473.66 3819.33 4047.6900000000005 3666.88 3643.8999999999996 True False 3281.635175636238 3264.996920012603 3351.3586607519146 3723.1947179335857 3227.8504710803113 3814.3223828578775 3605.852032159685 3743.1504669435753 3877.5796655211398 3435.3525710063445 3195.723400585271 1.0268833576257672 1.0216769446988576 1.0487011047758827 1.165055372830988 1.0100531449277357 1.1935708773041231 1.1283367113371896 1.1712998898021172 1.213365232050744 1.0749843276102016 1.0 11.641926828762498 -6.0721228813045975 6.331558279346972 1.1133286714463912 1.0266716673060894 0.25848158545469313 0.0658684368782674 0.3220096134610816 22.777803990821504 0.011982261706297478 0.03246113662548451 8.469877295781449e-07 6.0721228813045975 -0.08665700414030186 VEDTNRK ddPTM_A549_MK2206_60min_R1 1 VEDTNRK 7 1 O60437;K7EKI8 O60437 PPL Periplakin 0 81.635 0.015483000000000002 14468000.0 6044.7 6343.8 5890.1 4199.1 4445.6 3468.8 4149.5 4152.8 4205.2 8763.7 9404.5 False True 7064.897581273816 6666.6723234394085 6725.40474876992 5227.879688504763 3791.6581290507097 3835.866113596914 4903.410438002003 4741.472117416613 3252.7289143245016 6783.974083346015 7069.103099004251 0.9994050846802578 0.9430718763146164 0.9513802040484112 0.7395393185369101 0.5363704667972377 0.5426241575309931 0.6936396837517752 0.6707317818132393 0.46013318362589434 0.9596654608562154 1.0 12.787311467631515 -6.283603968759976 4.3162438578823075 0.700374342940039 0.9656979315311255 0.36337611877317455 0.15650150412842223 0.230884461203272 10.558024392345395 0.02908311768164763 0.07386558135202075 5.204703948781998e-07 6.283603968759976 0.2653235885910865 VEDTNRK ddPTM_A549_PD325901_60min_R1 1 VEDTNRK 7 1 O60437;K7EKI8 O60437 PPL Periplakin 0 83.61399999999999 0.014577000000000001 34664000.0 6070.8 5301.6 5192.4 5270.6 5761.4 5013.3 4278.9 4909.9 5998.6 5448.1 5897.8 False True 6687.103146913246 5748.384437966815 5544.787488437709 5596.152991598914 5356.7391397509855 4972.473346954318 4441.73588100392 4811.968192757961 5746.499702693413 5104.106036221439 5172.407989234561 1.2928413924097348 1.1113555717049093 1.0719934506284479 1.0819241257159726 1.0356373957545648 0.9613459257861385 0.8587365672330174 0.9303148944888358 1.1109911891431847 0.9867949409336464 1.0 12.336620361208334 -4.319237439701727 0.8711234340460834 1.0238605216889614 2.3426802690059487 0.6047554857264287 0.06896399404322236 6.30486392162676 1.049092557709329 0.0126312343980768 11.764048099323771 4.794712379956309e-05 4.319237439701727 1.3188197473169874 VEDVEALDR ddPTM_A549_MK2206_60min_R1 2 VEDVEALDR 9 0 P11216;H0Y4Z6 P11216 PYGB Glycogen phosphorylase, brain form;Alpha-1,4 glucan phosphorylase 0 ; 81.548 0.0043883 1429110.0 755.86 842.06 1100.4 770.86 943.47 991.41 967.1199999999999 1083.21 1326.8899999999999 1342.12 1484.73 False True 883.4306889972421 884.91725727094 1256.4532665907916 959.7207346052204 804.6868128071513 1096.320348155303 1142.8331853959505 1236.758334691498 1026.351533607923 1038.9341598571777 1116.0305645366136 0.7915828804957962 0.7929148944396214 1.1258233479586492 0.8599412642463833 0.721025784039584 0.9823389994793785 1.0240160276170085 1.1081760428353606 0.9196446461428894 0.9309190920667598 1.0 10.12416082321053 -7.409897099076527 20.211155980952363 0.9798017593117225 0.8677874959896175 0.2812047757890608 0.10636859283939024 7.0062822616765095 1237.8789530017852 0.016181191100760217 0.025867427844871338 3.8913733554566894e-08 7.409897099076527 -0.11201426332210507 VEEAST(ph)PK ddPTM_A549_MK2206_60min_R1 2 VEEASTPK 8 0 P54259 P54259 ATN1 Atrophin-1 1 VEEAS(0.015)T(0.985)PK;VEEAS(0.076)T(0.924)PK 105.52 0.0020957 19744800.0 5129.2 5386.6 4884.5 4866.9 8096.4 6035.5 5517.700000000001 5964.200000000001 8623.1 7016.9 7867.2 True False 5994.883563099854 5660.7549319711725 5577.195547676048 6059.290718483446 6905.430285236226 6674.1726039593495 6520.194667734345 6809.643614596459 6669.981618261111 5431.7774165513 5913.557116325831 1.0137525427038663 0.9572504028655213 0.9431202638220616 1.0246439831882712 1.167728686710759 1.128622328772923 1.1025842043080536 1.151530877379498 1.1279136206948916 0.9185296277185758 1.0 12.529810484493998 -6.525022446764423 24.950606055248297 1.0838695132274079 0.9722820130991449 0.3442698365164968 0.06945953268068632 52.328112555463896 609050.8048903531 0.00930805519917043 0.019475530075289613 2.9852283216579236e-07 6.525022446764423 -0.11158750012826302 VEEAST(ph)PKVNK ddPTM_A549_MK2206_60min_R1 2 VEEASTPKVNK 11 1 P54259 P54259 ATN1 Atrophin-1 1 VEEAS(0.142)T(0.858)PKVNK;VEEAS(0.139)T(0.861)PKVNK 51.211000000000006 0.0099132 11710400.0 4777.0 4986.200000000001 4641.5 4469.799999999999 6275.5 4167.6 3994.2 3810.5 6007.4 7440.400000000001 7001.4 True False 5583.240813563128 5239.9762822178445 5299.7344937124335 5564.901200656945 5352.382263104582 4608.612665771015 4719.894438237767 4350.650044166832 4646.733491846528 5759.608472417779 5262.759151190213 1.0608961294191916 0.9956709269191588 1.0070258473663682 1.0574113389548523 1.0170296814540907 0.8757027508524197 0.8968478896037503 0.826686139186685 0.8829462565839886 1.0944085235432444 1.0 12.36160365643856 -7.166978515558348 6.915691999733277 0.9253660929681319 1.0271574347094765 0.3334305805623058 0.06905857404863541 0.21181053541189085 13.414103787613884 0.00912039904491719 0.01586152030059601 6.808030370202034e-08 7.166978515558348 0.10179134174134463 VEEAST(ph)PKVNK ddPTM_A549_PD325901_60min_R1 2 VEEASTPKVNK 11 1 P54259 P54259 ATN1 Atrophin-1 1 VEEAS(0.136)T(0.864)PKVNK;VEEAS(0.12)T(0.88)PKVNK 92.925 0.00011561 23075300.0 7084.5 7751.4 8308.5 8086.1 8981.2 9148.7 8047.0 9502.5 9182.599999999999 8692.4 9719.5 True False 7803.713224666752 8404.63768154066 8872.364773069232 8585.560032134477 8350.39149545798 9074.196020441821 8353.232988487358 9312.965182932956 8796.68725535167 8143.560380545739 8524.063116986894 0.9154921916421973 0.9859896115494217 1.0408609898005374 1.0072145072489 0.9796257231855993 1.0645388115860632 0.9799590727854768 1.0925500028705706 1.0319828859339961 0.9553613422121566 1.0 13.057325560352725 -5.351779246009447 2.8387556574977766 1.0198682038932818 0.9066154016540414 0.37305054154698414 0.03801967675323595 0.21579865778613302 2.628772546792414 0.004283933563513952 0.050212187401783015 4.448573331481489e-06 5.351779246009447 -0.11325280223924039 VEEEEEEKVAEEEET(ph)SVKK ddPTM_A549_MK2206_60min_R1 1 VEEEEEEKVAEEEETSVKK 19 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 VEEEEEEKVAEEEET(0.5)S(0.5)VKK 108.4 3.5098000000000006e-10 7976900.0 1976.6 2039.4 1678.9 1497.5 2346.0 1416.4 1560.6 2016.0 2326.4 2256.1 2286.5 True False 2310.2017567697053 2143.196749018305 1916.9932654300987 1864.3875672253287 2000.906507727409 1566.2825078697742 1844.1408192664 2301.7741737410643 1799.4741144974143 1746.4454430705 1718.6989458103285 1.3441573129495907 1.2469878766393467 1.1153746676246892 1.0847668067581848 1.164198367960263 0.9113187109865286 1.072986530748658 1.339253846260916 1.0469978578179684 1.0161438961301565 1.0 10.74710114336771 -2.0000000000000004 0.388528418330067 1.0376149643057775 5.703093440612273 0.38178786877111304 0.10438782154736119 42.20159018517174 0.4985339517349607 0.024506166597497166 151.29345180746589 0.00999999999999999 2.0000000000000004 4.665478476306495 VEEEEEEKVAEEEETS(ph)VKK ddPTM_A549_PD325901_60min_R1 1 VEEEEEEKVAEEEETSVKK 19 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 VEEEEEEKVAEEEET(0.137)S(0.863)VKK 80.786 4.99e-05 10162000.0 2572.8 3327.1 3209.1 2778.1 3844.1 2582.3 2603.5 2688.1 2905.5 2753.9 3170.1 True False 2833.988762004745 3607.486393458467 3426.8888238859586 2949.6969274771245 3574.103677425065 2561.270604958835 2702.5776171898647 2634.483736726344 2783.391939148422 2580.0182840164875 2780.197796919609 1.0193478914143212 1.2975646543765602 1.2326061216518003 1.060966572502617 1.285557337461775 0.9212548142425909 0.9720810584715427 0.947588599503707 1.0011488902812424 0.9279981039029254 1.0 11.440971811669792 -7.267957343692068 24.970948815173934 0.9888150638190978 1.182181394263195 0.6141665342594043 0.08435331639027939 262.1551079635145 1004341.1709600692 0.011275647334826474 0.018286032463717457 5.3956361573156195e-08 7.267957343692068 0.19336633044409712 VEEEEER ddPTM_A549_MK2206_60min_R1 1 VEEEEER 7 0 P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35579;P35580-2;P35580-5 MYH9;MYH10 Myosin-9;Myosin-10 0 96.25299999999999 0.032663 2122900.0 854.6 982.21 703.0 797.16 148.0 156.19 115.73 99.406 233.17 1288.2 1251.8 False True 998.8355870360157 1032.20029364189 802.6959709317757 992.4642357858721 126.22939605441452 172.71792212946897 136.75664296661577 113.49710491810733 180.35736729597753 997.1947253062447 940.9435120775717 1.0615255583521908 1.0969843358214209 0.8530756210428084 1.054754321643118 0.13415193838331937 0.18355822630426943 0.145339907455934 0.1206205297781474 0.19167714637593336 1.0597817111300043 1.0 9.877964305617262 -6.739888931566739 24.99560940799787 0.4740522843511161 1.0106487720191901 0.43997997914649356 0.32601418288165507 239.49061657702018 277775.32537956274 0.0561859816405142 0.11687741791798492 1.8201662966443756e-07 6.739888931566739 0.536596487668074 VEEEEER ddPTM_A549_PD325901_60min_R1 2 VEEEEER 7 0 P35579;P35579-2;P35580-2;P35580-4;P35580;P35580-3;P35580-5 P35579;P35580-2;P35580-5 MYH9;MYH10 Myosin-9;Myosin-10 0 ; 108.46 0.024803 10552300.0 2115.36 1836.45 1928.48 1580.31 1860.54 2084.71 1658.56 2179.41 1823.76 1960.8 2160.23 False True 2330.1097899542738 1991.2140865218362 2059.358249692309 1677.9221595555864 1729.8620889145523 2067.7328129433968 1721.6774083988553 2135.939957835931 1747.1137094962385 1836.9947533677787 1894.5354048262357 1.2299109238172239 1.0510302850236086 1.0869990840214416 0.885664187262567 0.9130798424288159 1.0914194623525901 0.9087596906412869 1.1274215052380279 0.9221858324977998 0.9696280938789136 1.0 10.887628385654107 -5.14131524411674 1.1814083252697516 0.9734406251741412 1.392804228717112 0.45679248611497103 0.07711042087782644 1.2160836648272964 1.1559658219887643 0.010731426719574165 0.6673554800256373 7.222453524227092e-06 5.14131524411674 0.41936360354297086 VEEEGS(ph)PGDPDHEASTQGR ddPTM_A549_MK2206_60min_R1 1 VEEEGSPGDPDHEASTQGR 19 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 VEEEGS(1)PGDPDHEASTQGR 45.784 0.0092254 1048000.0 0.0 216.78 173.54 126.91 90.41799999999999 113.96 114.55 0.0 164.49 169.39 249.66 True False 0.0 227.8131760577564 198.15058150142315 158.00295569720635 77.11763197600034 126.01917155947423 135.3622522407831 0.0 127.2332776365542 131.12468135353572 187.6625317345316 0.0 1.2139513090445893 1.0558878198538215 0.8419525956343707 0.4109378215417628 0.671520150531389 0.7213067573460389 0.0 0.677989774839759 0.6987259531328576 1.0 7.551996823551936 -10.27505029691492 1.103681811833459 0.9686348441815226 0.6468658759430861 0.03128049397818522 0.3695977109217919 0.7511752355034577 1.8120601405285492 0.1419913218933751 0.06479363482641566 5.308229645100013e-11 10.27505029691492 -0.3217689682384365 VEEEGS(ph)PGDPDHEASTQGR ddPTM_A549_PD325901_60min_R1 2 VEEEGSPGDPDHEASTQGR 19 0 Q9NZT2-2;Q9NZT2;A0A0A0MRN5 Q9NZT2-2 OGFR Opioid growth factor receptor 1 VEEEGS(1)PGDPDHEASTQGR;VEEEGS(1)PGDPDHEASTQGR 71.527 0.00026712 2796400.0 448.17999999999995 355.17999999999995 254.91 475.83000000000004 281.52 474.59 418.33000000000004 549.88 100.83 592.94 293.09 True False 493.6789036673221 385.11226510431845 272.20972549835426 505.2209384116628 261.7470063912761 470.72509638981296 434.2497770689599 538.9122120274851 96.59246574577014 555.5016672082263 257.0417880505878 1.920617294998595 1.498247689704545 1.0590096169296073 1.9655206347702165 1.0183052661451386 1.8313173899069308 1.6894131509211887 2.096593772221282 0.37578506778345316 2.161133687332191 1.0 8.005859111499456 -8.767537380346932 24.999998861125725 0.7052318218084609 1.6099629491939742 0.0 0.5637706687773119 79.02426802774866 323975.22977669426 0.06493911424768314 0.06999416764568682 1.7079007122772664e-09 8.767537380346932 0.9047311273855133 VEEEKRGS(ph)VSR ddPTM_A549_MK2206_60min_R1 1 VEEEKRGSVSR 11 2 Q08170;A0A0D9SEM4 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 VEEEKRGS(0.999)VS(0.001)R 79.337 0.00019976 10712000.0 1315.0 1619.5 1260.6 1325.3 2229.1 1092.4 1079.5 740.97 2211.5 2647.6 2375.8 True False 1536.9398513367194 1701.9256325562146 1439.3720355001387 1649.9985594949778 1901.2023428709142 1207.9970429235673 1275.6311767256686 846.0047666254553 1710.598781039818 2049.5053211619415 1785.8232912557078 0.8606337809918555 0.95302017892235 0.8059991391914478 0.923942792981928 1.0646083250118645 0.6764370522204132 0.7143098552761646 0.473733751131997 0.9578768456071624 1.1476529235548412 1.0 10.80237361627365 -8.968326746368687 24.99535287056687 0.9814165610428073 0.8121244732434111 0.2775677013780018 0.15636804880350738 215.24258657569547 169862.6887587454 0.026937902918837832 0.028443535833432648 1.075655627432077e-09 8.968326746368687 -0.1692920877993962 VEEEQEADEEDVS(ph)EEEAESK ddPTM_A549_MK2206_60min_R1 4 VEEEQEADEEDVSEEEAESK 20 0 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 VEEEQEADEEDVS(1)EEEAESK;VEEEQEADEEDVS(1)EEEAESK;VEEEQEADEEDVS(1)EEEAESK;VEEEQEADEEDVS(1)EEEAESK 221.04 1.0880999999999997e-68 114795000.0 3356.17 3992.16 5263.24 2950.42 4920.23 3940.15 3852.4399999999996 3787.64 4402.07 4290.3 4494.91 True False 3922.609445521493 4195.343892105972 6009.646574746745 3673.2730324493887 4196.4706847892685 4357.094057740107 4552.378481208924 4324.549569161016 3405.008173661292 3321.118250257245 3378.6997937950155 1.1609819412560323 1.2417036576646212 1.778686163767336 1.0871853839146517 1.2420371565701367 1.2895771520576977 1.347375842496978 1.2799448998407772 1.0077865396371088 0.9829574845200751 1.0 11.722252453677001 -8.742154595245072 4.955451808996116 1.0028201327288797 1.3107316564667804 0.40367621995203995 0.16603011009603139 0.1299402284647293 8.222724247778697 0.027652573378115917 0.03061389753444891 1.8106954269765517e-09 8.742154595245072 0.30791152373790065 VEEEQEADEEDVS(ph)EEEAESK ddPTM_A549_PD325901_60min_R1 4 VEEEQEADEEDVSEEEAESK 20 0 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 VEEEQEADEEDVS(1)EEEAESK;VEEEQEADEEDVS(1)EEEAESK;VEEEQEADEEDVS(1)EEEAESK;VEEEQEADEEDVS(1)EEEAESK 213.2 5.041099999999999e-67 178635000.0 5470.19 6718.94 4937.51 5353.34 6435.94 8004.27 6254.78 7233.88 6754.42 5766.2300000000005 6923.3 True False 6025.519661858962 7285.168653921979 5272.599120259624 5684.003653482736 5983.901777187655 7939.085878927259 6492.80907564695 7089.594588530924 6470.555216528267 5402.149253729035 6071.777990414669 0.9923814196387394 1.1998410787454437 0.8683781140521468 0.9361349612017928 0.9855271036975097 1.307538894119721 1.0693423056470361 1.1676307334891116 1.065677175078393 0.889714555152913 1.0 12.567903325418213 VEEEQEADEEDVS(ph)EEEAESKEGTNK ddPTM_A549_MK2206_60min_R1 2 VEEEQEADEEDVSEEEAESKEGTNK 25 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 VEEEQEADEEDVS(1)EEEAESKEGTNK;VEEEQEADEEDVS(1)EEEAESKEGTNK 212.68 3.5942999999999995e-81 263980000.0 5168.7 5392.1 5795.9 4316.8 7267.299999999999 4592.9 4712.6 1207.0 7113.9 8584.6 8074.0 True False 6041.050197417568 5666.53485847877 6617.84577229514 5374.416193788515 6198.289796934097 5078.917629479722 5568.818419117548 1378.095946282474 5502.613008563943 6645.332897736363 6069.002968936184 0.9953941740246808 0.9336846410328975 1.090433767485067 0.8855517489935549 1.0213028117896235 0.8368619451128707 0.9175837361789408 0.22707122625185272 0.9066749574400816 1.0949628681597436 1.0 12.567243811041255 -7.258573601154416 24.722130862912696 0.8835282275404106 0.9827095326383963 0.08545932326597094 0.21704153332862386 646.250549546937 5574984.74477827 0.0329333909438858 0.05545939853648788 5.513487557795091e-08 7.258573601154416 0.09918130509798573 VEEEQEADEEDVS(ph)EEEAESKEGTNK ddPTM_A549_PD325901_60min_R1 2 VEEEQEADEEDVSEEEAESKEGTNK 25 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 VEEEQEADEEDVS(1)EEEAESKEGTNK;VEEEQEADEEDVS(1)EEEAESKEGTNK 282.18 1.2921999999999995e-153 497370000.0 9065.1 7428.0 9425.6 9320.3 10015.0 10150.0 10910.3 0.0 0.0 10737.4 10765.5 True False 9985.382278626088 8053.983628568271 10065.277896737238 9895.99376306291 9311.580949874367 10067.34176522178 11325.497436845242 0.0 0.0 10059.438731543853 9441.411748127213 1.0576153805183612 0.8530486587629069 1.0660776338595521 1.0481476739986335 0.9862487939604372 1.0662962313044684 1.199555504937252 0.0 0.0 1.0654591707155692 1.0 13.204786882569312 -8.239815194788312 24.985552588984785 0.4749999790002268 1.0327226538960024 0.3767396798527257 0.32205171195462584 745.2406605455463 861085.5657034272 0.06350586580942091 0.0819476067956271 5.7568485624219875e-09 8.239815194788312 0.5577226748957755 VEEEQEADEEDVS(ph)EEEAESKEGTNKDFPQNAIR ddPTM_A549_MK2206_60min_R1 2 VEEEQEADEEDVSEEEAESKEGTNKDFPQNAIR 33 2 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 VEEEQEADEEDVS(1)EEEAESKEGTNKDFPQNAIR;VEEEQEADEEDVS(1)EEEAESKEGTNKDFPQNAIR 321.89 1.6475999999999992e-240 217400000.0 13154.2 18013.9 17320.2 15415.0 22334.2 13482.8 12416.6 8896.5 27105.0 26201.0 26940.0 True False 15374.307370687055 18930.730566412105 19776.464801895516 19191.675692005654 19048.86876593583 14909.540946841704 14672.5354969263 10157.60611938858 20965.76077779076 20282.175902615214 20250.05449382473 0.7592230122331504 0.9348483764419028 0.9766129176554248 0.9477345208062611 0.9406823459040466 0.7362716456584539 0.7245677043190527 0.5016088288792581 1.0353434250848208 1.0015862381407556 1.0 14.305638169910411 VEEESTGDPFGFDS(ph)DDESLPVSSK ddPTM_A549_PD325901_60min_R1 2 VEEESTGDPFGFDSDDESLPVSSK 24 0 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 VEEEST(0.001)GDPFGFDS(0.909)DDES(0.089)LPVS(0.001)SK;VEEESTGDPFGFDS(0.792)DDES(0.208)LPVSSK 109.75 1.2397e-11 15419600.0 3111.1400000000003 2919.5299999999997 2722.6099999999997 3334.2 3299.7999999999997 3007.49 2576.44 3241.6 3033.5899999999997 2571.52 3163.24 True False 3426.9806424997832 3165.5690391914254 2907.382686983934 3540.1459614823916 3068.033431692005 2982.997998570133 2674.487834082066 3176.9437450139944 2906.0987618933946 2409.153788341652 2774.181533430487 1.235312325888804 1.1410821537972526 1.0480145772539744 1.2761046524250816 1.1059238174288284 1.0752713773858298 0.9640637434331335 1.1451823562120902 1.0475517650424924 0.8684196615506087 1.0 11.437846480690897 -7.225562183977513 2.7601054182167415 1.0304326971726374 1.164792826104484 0.4278549936676399 0.08468228832312935 0.19004430471067463 2.8732628047729256 0.010110287744077007 0.01804037296656944 5.9489157176545454e-08 7.225562183977513 0.13436012893184657 VEEGGRHPS(ph)PCQFTIATPK ddPTM_A549_PD325901_60min_R1 1 VEEGGRHPSPCQFTIATPK 19 1 O14686;O14686-3 O14686 KMT2D Histone-lysine N-methyltransferase 2D 1 VEEGGRHPS(0.979)PCQFT(0.021)IATPK 57.431999999999995 0.0017757 8948500.0 4215.7 4790.3 4620.1 4786.8 5158.1 5694.4 5305.4 5347.7 5724.5 5606.4 5638.1 True False 4643.674760565685 5193.995392559313 4933.647768918239 5082.469764388435 4795.812850478975 5648.0266943723045 5507.299900226273 5241.03592831051 5483.919172484991 5252.4109472057935 4944.649442860624 0.9391312395806938 1.050427427177615 0.9977750345965841 1.0278726172846901 0.9698994652499485 1.1422501755968277 1.1137897567598118 1.0599408489671247 1.1090612662952266 1.0622413192080853 1.0 12.271652527593108 -7.228538911996374 24.974038682495443 1.064266177643523 1.0017440254068308 0.43532016036582233 0.04542387629515778 749.3071919856064 568783.3138882909 0.00807248685267049 0.013981423383982056 5.908280260856978e-08 7.228538911996374 -0.06252215223669211 VEEKS(ph)P ddPTM_A549_MK2206_60min_R1 1 VEEKSP 6 1 S5FZ81 S5FZ81 PHF10 1 VEEKS(1)P 49.418 0.042678 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VEEKS(ph)P ddPTM_A549_PD325901_60min_R1 1 VEEKSP 6 1 S5FZ81 S5FZ81 PHF10 1 VEEKS(1)P 48.283 0.046403 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VEELARSLRADIER ddPTM_A549_MK2206_60min_R1 1 VEELARSLRADIER 14 2 Q9BX97 Q9BX97 PLVAP Plasmalemma vesicle-associated protein 0 35.659 0.048282 5097000.0 420.34 674.85 485.46 176.25 650.02 629.93 651.51 503.73 665.58 735.88 760.1 False True 491.2831156736708 709.1969824825946 554.3055278073115 219.43125791216323 554.4029190762873 696.5887744863074 769.8809337179629 575.1352701084257 514.8271927128562 569.6441969091437 571.3461923072075 0.8598694141808728 1.241273665653951 0.9701745373832238 0.38406006877556487 0.9703449966779336 1.2192061203267075 1.3474858922381776 1.0066318422214686 0.9010774896982922 0.9970210786017655 1.0 9.158221363698939 -6.983854037819762 24.998972913554933 1.0096607586242499 0.8707492602162037 0.12946784920439391 0.22446828745303685 566.5783774683415 877234.6331107623 0.034509625518771625 0.06520478749928278 1.0378771777008809e-07 6.983854037819762 -0.13891149840804617 VEELARSLRADIER ddPTM_A549_PD325901_60min_R1 2 VEELARSLRADIER 14 2 Q9BX97 Q9BX97 PLVAP Plasmalemma vesicle-associated protein 0 ; 37.156 0.042966000000000004 8789800.0 1489.82 1233.8600000000001 1395.6999999999998 1276.5 1837.49 1824.42 1098.44 1288.1799999999998 1878.88 1703.4099999999999 1396.73 False True 1641.0654296524826 1337.8417124320463 1490.4205950259056 1355.3465058581592 1708.4310413963703 1809.5625284045236 1140.2417352894315 1262.48623934234 1799.9172075812025 1595.8564018942302 1224.941064600968 1.3397097028395155 1.0921682284101206 1.216728410939035 1.1064585432113596 1.3947046847946942 1.4772649727389127 0.9308543637247333 1.0306505968543087 1.4693908626269594 1.3028025984369216 1.0 10.258496623397443 -11.189860693069795 1.617653144635406 1.0001451195586202 1.256611934095241 0.0 0.19375902906256054 0.5066029297876108 2.385616345125015 0.1362714067659878 0.028646777643997094 6.458613662178816e-12 11.189860693069795 0.2564668145366209 VEENPDADS(ph)DFDAK ddPTM_A549_MK2206_60min_R1 2 VEENPDADSDFDAK 14 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VEENPDADS(1)DFDAK;VEENPDADS(1)DFDAK 206.95 2.2856999999999997e-32 10347200.0 5788.6 7555.299999999999 6258.6 5989.2 8697.8 7553.1 6964.299999999999 7823.4 8366.2 8446.900000000001 7551.9 True False 6765.574162317669 7939.832498704521 7146.1635898628965 7456.5542688654 7418.36514190599 8352.364028657994 8229.623162640646 8932.390908157664 6471.269058076112 6538.739423373168 5676.55480816314 1.1918451227826552 1.3987062165394204 1.2588909702036866 1.3135703821871925 1.3068428637803424 1.4713790865978993 1.4497566641664554 1.5735584716477125 1.1399993969529083 1.15188519169588 1.0 12.470799885313044 -8.94125259284241 6.2693805734212535 1.0606217510011613 1.370136165081738 0.573218375854115 0.10558906920523693 0.09498792323254557 7.20527787690143 0.019373201853137484 0.02038385262552576 1.1448468859155511e-09 8.94125259284241 0.3095144140805768 VEENPDADS(ph)DFDAK ddPTM_A549_PD325901_60min_R1 2 VEENPDADSDFDAK 14 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VEENPDADS(1)DFDAK;VEENPDADS(1)DFDAK 183.36 5.224e-26 21830000.0 10587.0 9741.7 9621.8 8878.7 11464.1 10025.4 9854.900000000001 9821.8 9872.5 11935.3 11923.8 True False 11661.78444626252 10562.66724749912 10274.793208583684 9427.11713400927 10658.901164997964 9943.756466310779 10229.933612308205 9625.896493946957 9457.59315754355 11181.703121108956 10457.248191195873 1.1151867329763452 1.0100809557520114 0.9825522948985947 0.9014911917215576 1.0192835600834134 0.9508960946994247 0.978262486006687 0.9204999554329365 0.9044055362008192 1.0692777790741368 1.0 13.352215638092064 -5.2349584945865235 1.5312394291258347 0.9544868662674317 1.184051977961518 0.40051773706197247 0.0494661495950034 0.6625224814410429 1.345454182154786 0.00598041397125295 0.23258788719090429 5.821588518861698e-06 5.2349584945865235 0.22956511169408622 VEENPDADS(ph)DFDAKS(ph)SADDEIEETR ddPTM_A549_PD325901_60min_R1 2 VEENPDADSDFDAKSSADDEIEETR 25 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 2 VEENPDADS(0.929)DFDAKS(0.541)S(0.506)ADDEIEET(0.024)R;VEENPDADS(0.997)DFDAKS(0.459)S(0.416)ADDEIEET(0.128)R 61.958 0.00010087 5034000.0 851.16 920.4 792.01 752.6 910.89 735.3199999999999 732.4100000000001 782.08 758.6800000000001 710.5799999999999 715.8399999999999 True False 937.5691366091257 997.9653381440812 845.7605613430304 799.0863927213866 846.9122287999062 729.3317977145686 760.2822633401305 766.480800870109 726.7953179807688 665.7138575316587 627.7962180836361 1.493429093075902 1.589632605928076 1.3471896404931143 1.2728435911267801 1.3490241011408564 1.1617333407022943 1.2110335192220678 1.220907005795306 1.1576930491861357 1.0603980055244155 1.0 9.29415252776067 -2.0000000001480376 0.144846431784282 0.9482377987835914 3.1447916442932455 0.8682992052942939 0.06095482925448607 14.220573466825476 0.12993577554922223 0.11736570440976345 6.567521766760839 0.009999999996591308 2.0000000001480376 2.196553845509654 VEENPDADS(ph)DFDAKSS(ph)ADDEIEETR ddPTM_A549_PD325901_60min_R1 1 VEENPDADSDFDAKSSADDEIEETR 25 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 2 VEENPDADS(0.999)DFDAKS(0.45)S(0.481)ADDEIEET(0.069)R 63.805 8.4851e-05 4201900.0 454.82 292.53 647.49 586.2 472.14 547.75 514.07 516.99 643.22 456.15 526.98 True False 500.9929915792122 317.18252973412416 691.4325650736715 622.4082426432061 438.9785151945761 543.2893056059335 533.6332151598981 506.6782288791906 616.1877002578029 427.3486111529537 462.1648008014562 1.084013734300887 0.6862974618233297 1.4960736167588575 1.346723596353219 0.9498311304394624 1.1755315520866072 1.1546383762556258 1.096315054717586 1.3332640200838537 0.9246671542529278 1.0 8.852263575839592 -5.7453928224781325 24.999872196465315 1.1729855631413102 0.8851557552980142 0.24656344204675762 0.1875572384824826 243.01372955595446 378598.97403631744 0.02486672698927711 0.09569237361299052 1.7972445591021845e-06 5.7453928224781325 -0.28782980784329604 VEENPDADSDFDAKS(ph)SADDEIEETR ddPTM_A549_MK2206_60min_R1 1 VEENPDADSDFDAKSSADDEIEETR 25 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VEENPDADS(0.002)DFDAKS(0.496)S(0.496)ADDEIEET(0.006)R 54.683 0.0013379000000000002 1024000.0 175.33 390.76 334.48 234.34 380.54 393.07 201.21 388.98 304.45 408.6 256.83 True False 204.92141759305494 410.64801492909334 381.9142935380664 291.75331051992237 324.56307009829 434.6644065012508 237.76725249557384 444.1191062012895 235.4925611067475 316.2969762149754 193.0520228525984 1.0614828819976634 2.127136555531649 1.9782972894807247 1.5112678241278292 1.6812207678657922 2.251540284730046 1.231622694143521 2.300515164973895 1.2198399044311172 1.6384028073949715 1.0 7.592845861092167 -8.92979862588773 8.974300487627698 1.0965234047810226 1.7740604231759787 0.18229457713965858 0.410580448325534 0.2004670297693443 23.583275685345363 0.05969834586563906 0.06337465427446776 1.1754424589678711e-09 8.92979862588773 0.6775370183949561 VEENPDADSDFDAKS(ph)SADDEIEETR ddPTM_A549_PD325901_60min_R1 1 VEENPDADSDFDAKSSADDEIEETR 25 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VEENPDADSDFDAKS(0.554)S(0.446)ADDEIEETR 83.559 5.0453e-07 1271100.0 372.2 447.27 457.32 339.58 537.2 538.86 549.57 598.34 240.94 514.53 367.24 True False 409.9854700008419 484.9630125942015 488.3564852885628 360.55508535786413 499.46892523939147 534.4717028184635 570.484187086243 586.4056393113507 230.81412969141985 482.04248798976084 322.0718081261656 1.272962922107848 1.5057605178663334 1.5162969032584754 1.119486637019231 1.5507998919412838 1.6594799337702177 1.7712950115235373 1.8207294911128553 0.7166542487351228 1.4966925878868906 1.0 8.331238572766166 -8.769226162402235 24.99980646898529 0.8661978073595779 1.5257851022709934 0.28229477899314115 0.27519355829710507 76.52339716434912 245681.05083081796 0.0383459427925649 0.04118896224792414 1.701272326198224e-09 8.769226162402235 0.6595872949114155 VEENSVRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VEENSVRSPR 10 1 Q92576-2;Q92576;D6R9X2;E9PE34;A0A1B0GX99;D6RBF0 Q92576-2 PHF3 PHD finger protein 3 1 VEENS(0.013)VRS(0.987)PR;VEENS(0.008)VRS(0.992)PR 72.265 0.00061929 12301200.0 1534.81 1708.1999999999998 1501.1 1438.27 1827.6599999999999 1270.77 1374.24 875.1199999999999 2016.07 2324.5 1582.7800000000002 True False 1793.8484054981827 1795.1400836878827 1713.978551871535 1790.6462145663932 1558.8136350865625 1405.2420379311434 1623.9216195493125 999.1709399426002 1559.433364002235 1799.3938355646364 1189.7320434942799 1.5077751459308386 1.5088608342560066 1.4406425053808982 1.5050836231217324 1.310222451862588 1.1811416239608912 1.3649473664505196 0.8398285524932186 1.3107433497564132 1.5124362207474558 1.0 10.216420964874088 -2.0000000000007336 0.11742595445246054 0.9339562117851515 2.9179000231565055 0.19256923718103003 0.1936879784538904 48.412578395945005 0.3785107978419305 0.5539789494907752 15.766482822022667 0.009999999999983107 2.0000000000007336 1.9839438113713541 VEENSVRS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VEENSVRSPR 10 1 Q92576-2;Q92576;D6R9X2;E9PE34;A0A1B0GX99;D6RBF0 Q92576-2 PHF3 PHD finger protein 3 1 VEENS(0.008)VRS(0.992)PR;VEENS(0.008)VRS(0.992)PR 72.265 0.00061929 15761100.0 1180.42 1033.98 1053.71 1041.96 1241.0 1184.94 1031.66 1085.24 1007.6500000000001 1069.5700000000002 1073.8899999999999 True False 1300.255369420724 1121.117123353125 1125.2210970729714 1106.319502737146 1153.836441217582 1175.2902415056055 1070.9203858460137 1063.5940368456904 965.3019746972653 1002.0371676660419 941.8083379495913 1.380594455397907 1.190387765937501 1.1947453125363994 1.1746758423754364 1.2251287175154943 1.2479080871850499 1.1370895146007223 1.1293104913057348 1.0249452418300118 1.063950198028162 1.0 9.879289684832296 -8.39564689462517 1.0802799061823407 1.006247577779229 1.231087347946426 0.6973613769440106 0.05685775646421574 0.15151062276945135 0.34423229202929284 0.0103574002203872 0.01285650412966309 4.021176217855573e-09 8.39564689462517 0.22483977016719692 VEEPSQCLASGTAISELIIEDNNAS(ph)PQKLR ddPTM_A549_MK2206_60min_R1 2 VEEPSQCLASGTAISELIIEDNNASPQKLR 30 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VEEPSQCLASGTAISELIIEDNNAS(1)PQKLR;VEEPSQCLASGTAISELIIEDNNAS(1)PQKLR 162.19 1.0761e-46 40417000.0 1847.42 2491.6 2003.5500000000002 2272.2 3768.8 3045.3 2415.3 2715.0 4603.9 2919.5 2574.8999999999996 True False 2159.219330917477 2618.4117975159415 2287.6835171555613 2828.8891020029355 3214.4145124991705 3367.551624693463 2854.1287458504025 3099.859564338785 3561.1240009175754 2259.9829223191896 1935.4812663752512 1.1155981555746286 1.3528479159189566 1.1819714077831973 1.4615946695784088 1.6607830663838417 1.7399040141577697 1.4746351697816145 1.6015962635195995 1.8399165431277 1.1676594145246684 1.0 10.918476628438878 -6.271655398383585 21.004821468022442 1.4716242625162 1.2304100826937812 0.21147168789167103 0.23466414347778902 145.19420154209422 298534.26281769696 0.045647558654676096 0.107628099889654 5.349886909346799e-07 6.271655398383585 -0.24121417982241877 VEEPSQCLASGTAISELIIEDNNAS(ph)PQKLR ddPTM_A549_PD325901_60min_R1 2 VEEPSQCLASGTAISELIIEDNNASPQKLR 30 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VEEPSQCLASGTAISELIIEDNNAS(1)PQKLR;VEEPSQCLASGTAISELIIEDNNAS(1)PQKLR 282.88 1.8302999999999996e-168 75886000.0 7658.3 8260.3 7865.7 8630.900000000001 7751.6 7641.299999999999 7007.5 8759.900000000001 6936.200000000001 8545.3 8321.4 True False 8435.764978257514 8956.424470525373 8399.513702296521 9164.011090803904 7207.154357568255 7579.071786264938 7274.174247151135 8585.176922491388 6644.695635285242 8005.748299649977 7297.9205537007765 1.1559135121003388 1.2272570528304216 1.1509461689106941 1.2557016787688697 0.9875627316761494 1.0385248414935937 0.9967461544182473 1.1763867336343972 0.9104916375001803 1.096990333169667 1.0 12.833269730267165 -7.06626312318208 0.6719909379008054 0.9677480968111629 1.2153566342447397 0.30068866787709536 0.0887963383228608 0.4461304380797849 0.3708977453081964 0.015819420874671575 0.053668765199610405 8.584932341798519e-08 7.06626312318208 0.2476085374335768 VEET(ph)SPLGNAR ddPTM_A549_MK2206_60min_R1 1 VEETSPLGNAR 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 VEET(0.501)S(0.499)PLGNAR 57.174 0.014579 2851700.0 652.91 747.69 597.86 641.72 889.16 577.59 492.3 461.41 787.55 822.5 979.54 True False 763.1052458830859 785.7442273577993 682.6455379534452 798.9414288079053 758.3657418631296 638.7101904267876 581.7445375655828 526.8162805088618 609.171182458923 636.6966787489408 736.2931840713095 1.0364149259993416 1.067162163600445 0.927138200816662 1.0850860039070094 1.02997794665132 0.8674672049726987 0.7900990395549299 0.7154979726905092 0.8273486644145346 0.864732544756624 1.0 9.524136536196231 -7.2570217912622335 23.531908335155126 0.8857721992309234 1.0287069080211055 0.5407893164410755 0.08001156120737911 161.14999598561033 858420.1981606459 0.015197777044478852 0.02572039255202796 5.533223448868611e-08 7.2570217912622335 0.1429347087901821 VEETS(ph)PLGNAR ddPTM_A549_MK2206_60min_R1 1 VEETSPLGNAR 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 VEET(0.169)S(0.831)PLGNAR 73.84100000000001 0.0014616 3174500.0 937.64 762.55 717.82 833.12 1101.4 889.16 705.23 880.71 1367.7 1029.6 1225.6 True False 1095.8907089029374 801.3605378856075 819.6176697784463 1037.2344374001773 939.3855190157572 983.2503210233605 833.3611623550197 1005.5533395612572 1057.9181337681023 797.0126449117446 921.2496951607866 1.1895696841578554 0.8698624727856711 0.8896802615879266 1.125899354809716 1.0196861111056381 1.0673005659467305 0.9045985759697563 1.0915100920448684 1.148351135772656 0.8651429130433972 1.0 9.84744842659834 VEFDEEFSGAPVEGAGEEALT(ph)PSVPINK ddPTM_A549_PD325901_60min_R1 1 VEFDEEFSGAPVEGAGEEALTPSVPINK 28 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VEFDEEFS(0.004)GAPVEGAGEEALT(0.905)PS(0.091)VPINK 61.725 0.00068839 3274500.0 1147.6 1401.3 1356.0 1187.7 1218.5 1383.8 1655.3 1476.5 1455.2 1387.1 1815.4 True False 1264.1035071815315 1519.392468862777 1448.0263142904112 1261.0615315375908 1132.9167635967963 1372.5307915974283 1718.2933473149167 1447.050049208158 1394.0430045943144 1299.5182692760327 1592.1173087687637 0.7939763610503702 0.9543219337510832 0.909497250180778 0.7920657131180936 0.7115786992309743 0.8620789335296224 1.0792504659369158 0.9088840635287164 0.8755906345069343 0.8162201755604257 1.0 10.636730923649102 -7.543270056413825 24.966378650033725 0.9472880187974035 0.83569309307889 0.2439046975798167 0.08663123038682338 233.23783029982334 285566.8753550409 0.013060630409304684 0.019373130863486514 2.8623974978433496e-08 7.543270056413825 -0.1115949257185136 VEGDLKGPEVDLK ddPTM_A549_MK2206_60min_R1 1 VEGDLKGPEVDLK 13 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 90.412 0.00018692 2679800.0 1880.0 1654.2 1685.8 1806.5 2433.2 1966.5 1707.7 1750.8 2382.6 2914.8 2680.4 False True 2197.2980384129532 1738.391714340531 1924.8717891846213 2249.0925810968656 2075.27950324055 2174.5937247429474 2017.9669851731583 1998.9812616001286 1842.9449042303713 2256.3446555834817 2014.7827047233782 1.0905880982905467 0.8628184618942346 0.9553743858690205 1.1162953582161395 1.0300264630897147 1.0793192336051498 1.0015804584992292 0.9921572469893626 0.9147114971306052 1.1198947907850285 1.0 10.976408536456297 -8.441514626223158 3.529217357408125 0.959554780671156 1.017185317421054 0.0 0.08348479959772605 0.4130180905084182 9.854288522962605 0.012160388912290715 0.014628895634808316 3.618140053105171e-09 8.441514626223158 0.05763053674989793 VEGDLKGPEVDLK ddPTM_A549_PD325901_60min_R1 2 VEGDLKGPEVDLK 13 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 108.71 7.1227e-05 12189400.0 8390.5 8486.9 8335.1 8371.7 10350.3 9943.900000000001 8327.5 9174.9 9650.099999999999 9981.8 10188.5 False True 9242.297383240364 9202.120847778138 8900.770009028027 8888.800895489816 9623.330634596567 9862.920175289533 8644.407569482855 8991.899421930193 9244.539856126717 9351.547444495356 8935.379090222852 1.0343486594042042 1.0298523157061301 0.9961267361076269 0.9947872167187621 1.0769918698946388 1.103805454217561 0.9674360183488601 1.006325454257356 1.0345996250167104 1.0465753439300498 1.0 13.125313222656645 VEGIYTYSLS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 VEGIYTYSLSPSK 13 0 O95197-7;O95197-2;O95197 O95197-7 RTN3 Reticulon-3 1 VEGIYTYS(0.091)LS(0.901)PS(0.007)K 122.45 7.394400000000001e-06 1507500.0 1441.2 1760.0 2455.4 1531.0 2529.1 1989.4 1843.5 1837.9 3085.3 2409.8 3005.0 True False 1684.4393260429508 1849.576482432195 2803.6126415730905 1906.0950687292022 2157.0727402785105 2199.9169875431567 2178.440087349487 2098.4279533326912 2386.4844762116895 1865.424506321215 2258.7755662191275 0.7457311612691407 0.8188403089237085 1.241209035329678 0.8438620893707192 0.9549743553712805 0.9739422634296988 0.964434058845381 0.9290112681912724 1.0565389992270586 0.8258565101461909 1.0 11.141325215159293 -5.544393519362918 24.9450089435296 1.0075205814262775 0.7640082814845965 0.30094165945791507 0.10833383499897994 110.7031886347723 128353.20439757033 0.011883516422946229 0.0460324647491143 2.8550024195520027e-06 5.544393519362918 -0.243512299941681 VEGIYTYSLS(ph)PSK ddPTM_A549_PD325901_60min_R1 1 VEGIYTYSLSPSK 13 0 O95197-7;O95197-2;O95197 O95197-7 RTN3 Reticulon-3 1 VEGIYTYSLS(0.996)PS(0.004)K 165.73 3.5247e-19 3833500.0 2377.4 2422.5 2006.1 1928.4 2641.0 2194.6 2165.0 2426.4 2523.4 2600.5 2216.5 True False 2618.7518978506205 2626.6525767644903 2142.2460096592868 2047.5128882858403 2455.505270955387 2176.727905217311 2247.390259733459 2378.0035485260246 2417.3502733598784 2436.3039861958946 1943.8845515511541 1.3471746024016422 1.3512389790167891 1.1020438471769565 1.053309923499312 1.2631950127881704 1.1197825012191984 1.1561336078009972 1.2233255038877995 1.2435667907494377 1.2533172220808104 1.0 10.924726823641539 -10.804946826941842 0.9153555083158427 0.9925353375445396 1.203827141396379 0.0 0.11700506260257194 0.5301413814986544 0.7423991932566664 0.07796712384427178 0.01689725923676083 1.5669429077884217e-11 10.804946826941842 0.21129180385183943 VEGIYTYSLSPS(ph)K ddPTM_A549_PD325901_60min_R1 1 VEGIYTYSLSPSK 13 0 O95197-7;O95197-2;O95197 O95197-7 RTN3 Reticulon-3 1 VEGIYTYS(0.017)LS(0.327)PS(0.656)K 142.91 2.3605e-12 2778500.0 3422.9 3780.2 3299.6 3454.4 4772.1 3984.4 3615.2 3163.7 4286.2 3908.0 4360.6 True False 3770.3902881942017 4098.770720613053 3523.5306981066656 3667.770442488385 4436.924158851267 3951.95236742361 3752.778414313346 3100.5975216253623 4106.0659196620045 3661.248213056546 3824.273844120895 0.9859101209476594 1.071777515858114 0.9213594114143877 0.9590763088597579 1.1602004301214484 1.0333863443118743 0.981304835186565 0.8107676510645153 1.073685119587948 0.9573708270617256 1.0 11.900970118495882 VEGNFNPFAS(ph)PQK ddPTM_A549_MK2206_60min_R1 4 VEGNFNPFASPQK 13 0 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 VEGNFNPFAS(1)PQK;VEGNFNPFAS(1)PQK;VEGNFNPFAS(1)PQK;VEGNFNPFAS(1)PQK 116.84 2.0574e-09 4810600.0 4878.8 4781.3 4514.3 5015.099999999999 6849.3 5602.5 4564.3 5595.299999999999 7773.200000000001 7272.0 7930.0 True False 5702.222164792082 5024.647747416507 5154.495621020366 6243.799725136397 5841.777043212842 6195.3528313614825 5393.574228743834 6388.45090988759 6012.582611249699 5629.2501493766595 5960.762143134005 0.9566263554670227 0.8429539087051517 0.8647376790495912 1.0474834551699757 0.9800386096502411 1.0393558210501144 0.9048464104471112 1.0717506849767902 1.0086935977097131 0.9443842941897619 1.0 12.541281090152086 -6.254605462604065 24.990324144890145 1.0050518078915498 0.8835907665310282 0.4790225330833582 0.05148084991562533 268.9535282848481 983508.2638747997 0.005941673847251436 0.015344558450106937 5.564095012486876e-07 6.254605462604065 -0.1214610413605216 VEGNFNPFAS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 VEGNFNPFASPQK 13 0 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 VEGNFNPFAS(1)PQK;VEGNFNPFAS(1)PQK 175.15 6.360399999999999e-22 13037800.0 8724.5 8777.1 8804.9 9261.7 9997.4 9222.6 9526.5 9108.8 9309.4 9217.5 10020.900000000001 True False 9610.204817362564 9516.777020235124 9402.453462164922 9833.774174153166 9295.217113157663 9147.494203343285 9889.036170600832 8927.117838284632 8918.15829231055 8635.505476931605 8788.392827718913 1.0935110668985604 1.082880249756117 1.0698717782060492 1.1189502298005025 1.0576697349986686 1.0408608698614101 1.1252382960636953 1.0157850261458699 1.0147655512373495 0.9826034914705797 1.0 13.101383642126487 -8.382876951961103 6.757854550182206 1.0074270749322154 1.082094493135875 0.7173295728459246 0.024381891609762688 0.09800036605047151 5.06719092476389 0.00366600453167324 0.004433352887119326 4.141169893782519e-09 8.382876951961103 0.07466741820365952 VEGT(ph)PR ddPTM_A549_MK2206_60min_R1 2 VEGTPR 6 0 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 VEGT(1)PR;VEGT(1)PR 73.208 0.050020999999999996 266670000.0 12135.599999999999 10518.9 8248.7 5398.6 4109.8 4143.3 4266.700000000001 4917.9 3109.7 14395.5 14219.6 True False 14183.792593066086 11054.267080145457 9418.489694772317 6721.2572423523625 3505.2538642191416 4581.741255900051 5041.904160940635 5615.027385437099 2405.3579151704807 11143.546551891042 10688.480879004828 1.3270166970993071 1.0342224685885097 0.881181320469298 0.6288318535101461 0.32794687139352446 0.42866159445538 0.47171382145093677 0.5253344651124919 0.22504207495896614 1.0425753367609134 1.0 13.383769201357753 -5.79001528868971 1.5128029109517118 0.5702537457876548 1.3138704059991255 0.4977444494560397 0.24052079824712358 0.3927364234259007 1.4745629039638808 0.04260421196264001 0.32398540432156736 1.6217530049574757e-06 5.79001528868971 0.7436166602114708 VEGT(ph)PR ddPTM_A549_PD325901_60min_R1 2 VEGTPR 6 0 A0A3B3ITP6;A0A3B3IT92;P33991;E5RFR3;A0A3B3IS57;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 VEGT(1)PR;VEGT(1)PR 77.923 0.046981999999999996 446440000.0 15281.6 16020.3 12806.1 11924.5 13575.8 11883.599999999999 8739.6 10422.3 12973.3 15917.1 18646.2 True False 16832.97678228066 17370.38690424774 13675.198955335125 12661.049282495584 12622.282641967491 11786.823901595026 9072.190260492629 10214.41905036382 12428.077316866018 14912.091589570711 16352.835608000516 1.0293613404910178 1.0622247615422364 0.8362585721001576 0.7742418248429801 0.7718711876362362 0.7207816542733666 0.5547778060004541 0.6246267800409174 0.7599952457655518 0.9118963797492754 1.0 13.997253202605767 -5.787063984864802 6.353075383467167 0.8158492756539286 1.0467383808898634 0.3905352476923454 0.12229155532457375 0.1638362507465327 21.85099358586783 0.021933863095801937 0.07312735554154712 1.632811367100655e-06 5.787063984864802 0.23088910523593476 VEHES(ph)FEK ddPTM_A549_MK2206_60min_R1 2 VEHESFEK 8 0 A0A0C4DG49;P15151-3;P15151-2;P15151;K7EMC6;A0A0A0MSA9;P15151-4 A0A0C4DG49 PVR Poliovirus receptor 1 VEHES(1)FEK;VEHES(1)FEK 70.91199999999999 0.0063733999999999996 9692100.0 6067.799999999999 8208.6 7469.2 6924.700000000001 9409.099999999999 7568.1 8168.6 6845.0 10411.6 9443.9 10983.6 True False 7091.896296533043 8626.382678234606 8528.444873518665 8621.251810861599 8025.033854159396 8368.951318701796 9652.728883928945 7815.2997119333295 8053.389223908736 7310.516430926599 8256.068988061368 0.8589918890925247 1.0448535120901639 1.0329909895194873 1.0442320459444199 0.9720163271120845 1.0136726486665337 1.1691676629503953 0.9466126946413105 0.9754508150978733 0.88547181976046 1.0 13.011239310694352 -3.5159899256549814 16.550153863611964 1.000430326173355 0.49333326123004795 0.0 0.08042387618576402 0.0 0.0 0.008831500266637487 0.0 0.0003047965692579845 3.5159899256549814 -0.507097064943307 VEHES(ph)FEK ddPTM_A549_PD325901_60min_R1 1 VEHESFEK 8 0 A0A0C4DG49;P15151-3;P15151-2;P15151;K7EMC6;A0A0A0MSA9;P15151-4 A0A0C4DG49 PVR Poliovirus receptor 1 VEHES(1)FEK 66.993 0.0082182 13045000.0 6699.7 6774.4 7276.3 6914.0 7362.6 7530.2 6979.7 6879.4 7191.6 5764.9 7222.4 True False 7379.848611941537 7345.302462758867 7770.113473946404 7341.062077166718 6845.476375591114 7468.876547829848 7245.316302938394 6742.184970215105 6889.362061462666 5400.903230156014 6334.090586565786 1.1650999478273547 1.1596459448082095 1.2267133486259785 1.1589764902852284 1.0807354713413708 1.1791553097884127 1.1438605438174916 1.0644282518653683 1.087663961749233 0.8526722433700261 1.0 12.628921784780749 -9.115865990890494 0.2397599235542925 0.9632553778860532 1.2052093028853101 0.6721382791241721 0.056853436653485606 0.7538162861439983 0.14509885715020687 0.06743813912777886 0.04571641026574519 7.658328815001998e-10 9.115865990890494 0.24195392499925694 VEHHDHAVVSGR ddPTM_A549_PD325901_60min_R1 2 VEHHDHAVVSGR 12 0 O95831-3;O95831;E9PMA0;O95831-5;O95831-2 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 0 ; 54.343 0.02044 14532400.0 596.4300000000001 559.63 358.93 470.93 648.03 530.06 602.49 708.3399999999999 491.91999999999996 740.0799999999999 840.84 False True 656.9791345314402 606.7919841216554 383.2891482214289 500.0182765403703 602.5146083821347 525.7433671008328 625.4180866451784 694.2116030180201 471.24631309787986 693.351222497157 737.422010523922 0.8909133781681822 0.8228558077491384 0.5197690640520892 0.678062587506872 0.817055362849912 0.712947755285069 0.8481142110212206 0.9414034204441472 0.6390456297379431 0.9402366794076926 1.0 9.526346668316304 -7.764956574705415 24.910914406316913 0.8366540425662987 0.734661572623528 0.19055877965951895 0.1266345622930039 174.5622439573604 1236358.6078184703 0.024496112158840306 0.03458544167900688 1.718080170154364e-08 7.764956574705415 -0.10199246994277067 VEHS(ph)PGPPPVDK ddPTM_A549_MK2206_60min_R1 1 VEHSPGPPPVDK 12 0 Q9H869-7;Q9H869-5;Q9H869-6;Q9H869-4;Q9H869-3;Q9H869-2;Q9H869;Q9H869-8;Q9H869-9 Q9H869-7 YY1AP1 YY1-associated protein 1 1 VEHS(1)PGPPPVDK 88.561 8.528600000000001e-05 8945800.0 2424.8 2605.3 2132.9 2375.7 3153.6 1950.2 2256.1 2783.7 3926.6 3841.1 3717.0 True False 2834.0469593317707 2737.8986418639747 2435.377292176935 2957.746606649224 2689.7096175486604 2156.568869562012 2666.0041665685803 3178.2979997237107 3037.231369491722 2973.392842240193 2793.966316018802 1.014345428247711 0.9799325876502621 0.8716559244877261 1.058619278869402 0.962685055337854 0.7718664527906568 0.954200539671302 1.1375577370068488 1.0870679979490787 1.0642192875385343 1.0 11.448098912422504 -8.075528974424724 11.416253818174216 1.0493660330681274 0.9407034398917026 0.3716946611937385 0.07774085252248049 0.8244559811007336 122.96538821773045 0.013026258865102853 0.016822003163200722 8.403709389761475e-09 8.075528974424724 -0.1086625931764248 VEHS(ph)PGPPPVDK ddPTM_A549_PD325901_60min_R1 2 VEHSPGPPPVDK 12 0 Q9H869-7;Q9H869-5;Q9H869-6;Q9H869-4;Q9H869-3;Q9H869-2;Q9H869;Q9H869-8;Q9H869-9 Q9H869-7 YY1AP1 YY1-associated protein 1 1 VEHS(1)PGPPPVDK;VEHS(1)PGPPPVDK 116.58 7.311799999999999e-06 32772000.0 3977.0 4329.2 4265.9 4178.1 5063.700000000001 4326.0 4345.299999999999 4175.5 4458.1 4693.1 5145.9 True False 4380.742112287338 4694.036877328723 4555.40962694061 4436.1717478464325 4708.043180816654 4290.770490280728 4510.662769339396 4092.2163768836153 4270.741560460358 4396.776865070546 4512.986922547752 0.9706968328226937 1.0401175447410251 1.0094001390034848 0.9829790832502668 1.0432210998206892 0.9507606744533674 0.9994850077679719 0.9067645103153554 0.9463226093394843 0.9742498572516134 1.0 12.139866882666766 -7.275396579077811 24.98040760660131 0.9689809805327294 1.0095411606839029 0.340559538266919 0.0315081625201122 853.1398958316953 1526935.867692908 0.005075879115036092 0.008133018491222081 5.303998846191092e-08 7.275396579077811 0.040560180151173464 VEIATLTR ddPTM_A549_MK2206_60min_R1 1 VEIATLTR 8 0 P25789;H0YMZ1;H0YN18;H0YL69;P25789-2 P25789 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type 0 66.682 0.02317 2015800.0 615.63 778.23 537.82 607.67 1123.6 918.76 703.04 627.61 1055.3 1044.0 968.87 False True 719.5332932915778 817.8385829109129 614.0909631387314 756.549177279343 958.3199284239196 1015.9825733764703 830.7732677028393 716.5756394750149 816.2762349678134 808.1596749105104 728.2728395483279 0.9879996262634616 1.1229837754462098 0.8432155227971818 1.0388265718498468 1.3158803629396176 1.3950576187992663 1.1407445432375067 0.9839384370278487 1.1208384971133414 1.1096935530531773 1.0 9.508335231573124 -5.244838234325314 21.98202955005046 1.0846046293111518 0.9879992358502988 0.03236878979283475 0.14588054961038502 1989.557854494124 2634188.9385476736 0.02108320201226945 0.6466302014224385 5.69064856212574e-06 5.244838234325314 -0.09660539346085295 VEKEEAGGGIS(ph)EEEAAQYDR ddPTM_A549_MK2206_60min_R1 2 VEKEEAGGGISEEEAAQYDR 20 1 A0A590UK93;A0A590UKC5;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0QZS6;M0R375 A0A590UK93 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed 1 VEKEEAGGGIS(1)EEEAAQYDR;VEKEEAGGGIS(1)EEEAAQYDR 176.09 3.1557e-35 60865000.0 5914.4 6353.9 4920.200000000001 4631.3 6536.700000000001 5739.9 5398.6 4959.4 7824.5 7514.6 8308.7 True False 6912.60612680296 6677.2863702988225 5617.958344492921 5765.968707906955 5575.160089114133 6347.292408162743 6379.455739389715 5662.410137525514 6052.263243158966 5817.04664088364 6245.420481545712 1.1068279785530344 1.069149209413395 0.899532443186676 0.9232314661510037 0.8926797011647016 1.016311460039888 1.0214613664908643 0.9066499452290031 0.9690721803347754 0.9314099279739686 1.0 12.608582991198176 -5.605589639168151 6.6637485832762415 0.9698270627468321 1.0976558541473596 0.5351364982402331 0.047093865375426903 0.11846425320373624 7.587128903846072 0.006608696603547772 0.02623261854635865 2.479764057072696e-06 5.605589639168151 0.1278287914005275 VEKEEAGGGIS(ph)EEEAAQYDR ddPTM_A549_PD325901_60min_R1 2 VEKEEAGGGISEEEAAQYDR 20 1 A0A590UK93;A0A590UKC5;B3KNJ4;Q9UBE0-2;Q9UBE0-3;Q9UBE0;M0QZS6;M0R375 A0A590UK93 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed 1 VEKEEAGGGIS(1)EEEAAQYDR;VEKEEAGGGIS(1)EEEAAQYDR 150.14 7.847699999999999e-25 30444000.0 11103.0 11347.0 11467.0 11955.0 14054.0 12220.0 11668.0 11737.0 11785.0 12696.0 13907.0 True False 12230.1683864034 12303.251512299968 12245.219576672665 12693.433198225057 13066.895523667923 12120.484371528088 12112.032124974585 11502.896327501618 11289.717433441447 11894.372393287087 12196.527163736475 1.0027582624312066 1.008750388297483 1.003992317836258 1.0407416002783165 1.071361982656775 0.9937652094577805 0.9930722050935027 0.9431288245479249 0.925650169255457 0.9752261634485778 1.0 13.574182793165864 -7.798616393298894 2.379706247788726 0.962665720463035 1.023945578123521 0.5276495110898773 0.026341164865828146 0.2200712985590541 2.5572713172656516 0.005458471388555448 0.008077068518376558 1.589950511274796e-08 7.798616393298894 0.06127985766048594 VEKPDTK ddPTM_A549_MK2206_60min_R1 1 VEKPDTK 7 1 Q02878;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q02878 RPL6 60S ribosomal protein L6 0 59.245 0.031111 5639400.0 4200.6 4011.1 3826.4 3427.1 5080.6 4544.1 3738.4 3900.1 5554.4 5749.5 5216.9 False True 4909.558585190138 4215.24785720669 4369.041057145587 4266.739653848368 4333.250470230126 5024.953645870545 4417.618889366598 4452.951118555324 4296.337268554176 4450.683956798829 3921.399750884715 1.2519913543837202 1.0749344940555166 1.114153448946356 1.088065467665147 1.1050264562424406 1.2814183620878883 1.1265413296285158 1.13555143607858 1.0956131844464136 1.1349732849334477 1.0 11.93715300359447 -9.732846638586276 0.6958511118603948 1.0078131768279033 1.1450940993284786 0.0672862320395311 0.07226110203285407 0.4429407255417162 0.454358472627428 0.027234186579510322 0.013973617227982574 1.8499217622762877e-10 9.732846638586276 0.13728092250057533 VEKPDTK ddPTM_A549_PD325901_60min_R1 2 VEKPDTK 7 1 Q02878;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q02878 RPL6 60S ribosomal protein L6 0 ; 55.676 0.039879000000000005 7559400.0 7091.9 7602.400000000001 6508.799999999999 6660.9 8589.900000000001 7238.4 6864.7 7059.799999999999 8029.3 8902.2 9124.5 False True 7811.86446721916 8243.080928625124 6950.526308593977 7072.328664998519 7986.575057546258 7179.452870283871 7125.939915007974 6918.986750694044 7691.856443642885 8340.11357274104 8002.24434497113 0.9762091896292057 1.030096129694583 0.8685721166414911 0.8837931410383638 0.9980418884066294 0.8971799111327651 0.8904926677834009 0.8646307776195511 0.9612123939300475 1.0422218084333101 1.0 12.966188966069435 -9.195917569535068 2.4510810083550325 0.9863075765387483 0.9264407387286269 0.25934886099232857 0.055072722365116226 0.3181085091330063 3.954734008838479 0.010750784985251987 0.01009186244180893 6.369163981809875e-10 9.195917569535068 -0.059866837810121476 VEKPGGQDKGSQEDDPAATQRPPS(ph)NGGAK ddPTM_A549_MK2206_60min_R1 2 VEKPGGQDKGSQEDDPAATQRPPSNGGAK 29 3 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 VEKPGGQDKGSQEDDPAAT(0.005)QRPPS(0.995)NGGAK;VEKPGGQDKGSQEDDPAAT(0.055)QRPPS(0.945)NGGAK 65.736 0.00010583 16601600.0 1576.4499999999998 1786.67 1744.9 1583.55 2175.5 1607.5500000000002 1600.69 1610.18 2790.5 2799.2 2799.9 True False 1842.5162194979248 1877.6038715154145 1992.3530578646598 1971.5198210882597 1855.486831867423 1777.6598739946733 1891.5146533330342 1838.4279459694399 2158.4562055128226 2166.8587758711674 2104.6075566911604 0.8754678342002665 0.892139660691593 0.9466625031970398 0.9367636331154585 0.881630794286702 0.8446514735457329 0.8987493403790926 0.8735252993483473 1.0255860759648332 1.029578540180611 1.0 11.039335525650078 -8.763801688840523 24.99994417967495 1.0120823200473725 0.8949789629804901 0.7966325696544468 0.028003016562263533 20.85002903476349 220652.09236550872 0.005173078808561084 0.005635988231919198 1.7226550084801876e-09 8.763801688840523 -0.11710335706688246 VEKPGGQDKGSQEDDPAATQRPPS(ph)NGGAK ddPTM_A549_PD325901_60min_R1 3 VEKPGGQDKGSQEDDPAATQRPPSNGGAK 29 3 Q9UGU0-2;Q9UGU0 Q9UGU0-2 TCF20 Transcription factor 20 1 VEKPGGQDKGSQEDDPAAT(0.298)QRPPS(0.702)NGGAK;VEKPGGQDKGSQEDDPAAT(0.02)QRPPS(0.98)NGGAK;VEKPGGQDKGSQEDDPAAT(0.001)QRPPS(0.999)NGGAK 119.35 2.5546e-21 39018100.0 3466.48 3440.49 3908.7799999999997 3495.71 3859.05 4109.07 3949.9400000000005 4804.8 4324.969999999999 3711.39 4824.82 True False 3818.3944977123 3730.432166700707 4174.053316203595 3711.6320673665678 3588.0036409997665 4075.6070962778167 4100.257128190103 4708.9644947073175 4143.206551388312 3477.052202010218 4231.397727053933 0.9023955543812276 0.8816075460951722 0.9864478797434476 0.8771645462764743 0.8479476221437301 0.9631822294132149 0.9690077351922352 1.1128626516481792 0.979157909193513 0.8217266317886596 1.0 12.046918581767505 -7.558022830947201 3.1619846542839216 0.9995771892201701 0.9018141727180745 0.17986139824440273 0.07213216210248266 0.16769828904283415 3.459040028343269 0.007450738774177628 0.011640654801698241 2.7667961905627938e-08 7.558022830947201 -0.09776301650209562 VELKS(ph)EANDAVNSSTK ddPTM_A549_MK2206_60min_R1 1 VELKSEANDAVNSSTK 16 1 O15234;K7EQ38 O15234 CASC3 Protein CASC3 1 VELKS(1)EANDAVNSSTK 106.73 2.1709e-07 2713000.0 1954.7 2262.3 1852.0 1528.2 2271.9 1578.0 1907.5 2323.8 2159.9 2280.8 2495.9 True False 2284.605572173298 2377.441406935428 2114.64144831529 1902.6090686035052 1937.706519567732 1744.9829126083746 2254.068058920068 2653.2057663390324 1670.6860986515499 1765.565695915605 1876.0991466643338 1.2177424504644545 1.2672258879081473 1.127148025239007 1.0141303416646745 1.032838015524358 0.9301123108077304 1.2014653185721849 1.4142140467663333 0.8905105583689411 0.9410833638801792 1.0 10.873520356983018 -2.0000000005030065 0.17750718358849782 0.9401571832855731 2.221877087192031 0.14473664564825384 0.14518655295673616 60.01234406042616 0.6250860362199921 0.1757425470890166 20.89399142025413 0.009999999988417847 2.0000000005030065 1.281719903906458 VELQELNDR ddPTM_A549_MK2206_60min_R1 2 VELQELNDR 9 0 P08670;B0YJC4;A0A1B0GTT5;P17661 P08670 VIM;DES Vimentin;Desmin 0 ; 84.213 0.0037983000000000005 7957000.0 1810.8899999999999 1933.9099999999999 1622.42 1297.08 2737.8 2148.01 1967.8700000000001 2019.0300000000002 3116.0 2387.3999999999996 2550.5 False True 2116.5239599902293 2032.337758602527 1852.503552146702 1614.8646582281337 2335.073246741729 2375.310992466361 2325.4065064781325 2305.233685520053 2410.2309752295137 1848.0846818786904 1917.1404597809926 1.104000465480768 1.0600880849568497 0.9662847303104362 0.8423298616381035 1.217998000526513 1.23898641872996 1.2129557302983314 1.2024333813201118 1.2572010375832607 0.9639798025491617 1.0 10.904740324957688 -6.783536531334645 24.99991074031984 1.1519445165889686 0.9960343454625714 0.34533427629131863 0.10786246342898438 238.74015771003323 270101.39627032686 0.017619352386042456 0.03331590810391252 1.646127494010291e-07 6.783536531334645 -0.15591017112639716 VELQELNDR ddPTM_A549_PD325901_60min_R1 2 VELQELNDR 9 0 P08670;B0YJC4;A0A1B0GTT5;P17661 P08670 VIM;DES Vimentin;Desmin 0 ; 121.6 0.00034428 10602000.0 4172.3 4382.3 4525.2 3826.4 4866.1 4409.0 4218.1 3822.1000000000004 4609.1 5111.4 5147.6 False True 4595.868824515081 4751.61180068319 4832.30728423818 4062.748037615086 4524.321923133661 4373.0945657992925 4378.622103732889 3745.865217120556 4415.395555577003 4788.665331683016 4514.477833324936 1.0180288826737243 1.0525274408499208 1.0704022619331726 0.8999375315622828 1.0021805600054248 0.9686822545717289 0.9699066570691325 0.8297449573169589 0.9780523282191068 1.060735152210536 1.0 12.140343412824983 -6.23543388354562 24.977922556400834 0.971193071394097 1.0475403263873966 0.2877950963023176 0.05749802151124286 739.6049484353775 710379.814506538 0.007323969405053754 0.019370797429630725 5.815219557526952e-07 6.23543388354562 0.07634725499329953 VELS(ph)PGPPKPAGR ddPTM_A549_MK2206_60min_R1 4 VELSPGPPKPAGR 13 1 A0A087WXE2;Q8IZ73-2;Q8IZ73 A0A087WXE2 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 1 VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR 88.73 5.3008000000000005e-05 199891000.0 7929.9 8938.0 8592.599999999999 7813.3 9880.0 7964.9 8009.200000000001 7700.4 12277.099999999999 11962.5 11229.0 True False 9268.27325255898 9392.90602271532 9811.15988595786 9727.558850752364 8426.665087956857 8807.740431327276 9464.367967235974 8791.955281485958 9496.356452500086 9260.162941682931 8440.529395365922 1.0980677654706719 1.1128337551756267 1.1623867919166837 1.152482077260824 0.9983574125792777 1.04350568770757 1.1213002791545477 1.0416355265954027 1.125090146325874 1.0971068884336816 1.0 13.043117773181864 -10.90708587356595 0.9786931554530818 0.9956760258548458 1.0966127606721923 0.0 0.055115160052151314 0.5714359490591472 0.9001918901789377 0.043026580144376166 0.008587856248258708 1.2385516620190342e-11 10.90708587356595 0.10093673481734644 VELS(ph)PGPPKPAGR ddPTM_A549_PD325901_60min_R1 3 VELSPGPPKPAGR 13 1 A0A087WXE2;Q8IZ73-2;Q8IZ73 A0A087WXE2 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 1 VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR 115.82 4.9685e-06 270300000.0 14567.3 13305.7 14737.0 14206.8 16375.6 15062.900000000001 15390.3 16006.6 16043.1 15595.4 15681.8 True False 16046.161572120527 14427.018035358204 15737.141440780086 15084.321770016202 15225.434348753126 14940.232736488582 15975.98628839531 15687.335806065214 15368.864298383081 14610.703782472392 13753.038015120645 1.1667357826306253 1.0490059010595738 1.1442665557586649 1.0967992492591012 1.1070597152435462 1.0863223616529445 1.1616332530187634 1.1406451279214036 1.1174886800637018 1.0623619135211286 1.0 13.747462721475724 -10.53890807324863 0.80237692699171 0.9983739801364473 1.117408127888835 0.41919001174205694 0.03729237419826975 0.31497860347081275 0.35705565334394307 0.02252091669649562 0.006038922720493304 2.8912918149306034e-11 10.53890807324863 0.11903414775238774 VEMGTSSQNDVDMSWIPQET(ph)LNQINKASPR ddPTM_A549_PD325901_60min_R1 2 VEMGTSSQNDVDMSWIPQETLNQINKASPR 30 1 C9JBX5;P43307-2;P43307;A0A3B3IRT8 C9JBX5 SSR1 Translocon-associated protein subunit alpha 1 VEMGTSSQNDVDMS(0.014)WIPQET(0.583)LNQINKAS(0.403)PR;VEMGTSSQNDVDMS(0.001)WIPQET(0.727)LNQINKAS(0.272)PR 96.134 3.152e-10 9453000.0 3130.8 3633.5 3730.7000000000003 3267.1000000000004 3811.5 3959.1 3508.6000000000004 4303.4 3854.4 4434.700000000001 4360.5 True False 3448.6365112268554 3939.7077967693567 3983.8877365215617 3468.9013468775474 3543.79338896117 3926.858402235423 3642.121692979589 4217.565311048011 3692.412972037058 4154.692285169366 3824.186143486946 0.9017961944923373 1.0302081669008603 1.0417609360639013 0.9070953182510502 0.9266791039962008 1.026848133144183 0.9523913210089329 1.1028661139393114 0.9655421659653483 1.086425223376041 1.0 11.900937033333669 -7.270261092968664 24.92461411823114 0.9933611055052689 0.9667601982311771 0.1019361856421771 0.06274596689805259 1696.4309853671684 4793036.6108842455 0.008310421340707875 0.01340349015736328 5.367090359108012e-08 7.270261092968664 -0.026600907274091812 VEMMSEAALNGNGDDLNNYDS(ph)DDQEK ddPTM_A549_PD325901_60min_R1 1 VEMMSEAALNGNGDDLNNYDSDDQEK 26 0 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;A0A3B3ITA2 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 VEMMSEAALNGNGDDLNNY(0.193)DS(0.807)DDQEK 51.758 0.0023501999999999998 2359700.0 897.96 1041.8 730.28 915.79 686.43 1104.2 947.31 1110.0 849.3 1251.9 1292.2 True False 989.1202381567864 1129.5961421974184 779.8411923303844 972.3562683900061 638.2175248549432 1095.207761296343 983.3604004379218 1087.8601792218458 813.6068745203079 1172.8548203494097 1133.2675919307026 0.8728037801483954 0.9967602976036496 0.6881350864377938 0.8580111840429865 0.5631657777909608 0.9664158483791825 0.8677212755750036 0.9599323116339205 0.7179300637497261 1.0349319337291416 1.0 10.14627284129229 VEMPS(ph)FK ddPTM_A549_PD325901_60min_R1 1 VEMPSFK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VEMPS(1)FK 67.89699999999999 0.023176 1602100.0 1282.2 1355.8 1269.2 1274.2 1480.3 1180.7 1209.0 1397.8 1138.3 1469.5 1639.9 True False 1412.3680000942493 1470.0580241805137 1355.3355443196092 1352.9044400818382 1376.3288347577657 1171.084770659838 1255.009156590185 1369.919782447114 1090.4612095448786 1376.7155192135608 1438.2026961826034 0.9820368184839823 1.0221494008337373 0.9423814514581658 0.9406910748205584 0.9569783441589503 0.8142696253930186 0.8726232817678163 0.9525220513654079 0.7582110730561631 0.9572472106106831 1.0 10.490051304089814 -6.526680928760196 1.198707147951163 0.8842898860586961 0.9959514156426136 0.22471439119016912 0.06740031134748627 0.6459003202507122 1.7535234473443155 0.0139703466731942 0.05015753379228156 2.973850083334156e-07 6.526680928760196 0.11166152958391751 VEMY(ph)S(ph)GSDDDDDFNKLPK ddPTM_A549_PD325901_60min_R1 1 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 2 VEMY(0.667)S(0.667)GS(0.667)DDDDDFNKLPK 83.41799999999999 5.2103e-05 21677000.0 14872.0 15114.0 16314.0 15029.0 16496.0 16349.0 15220.0 15919.0 17180.0 17794.0 16435.0 True False 16381.794491812252 16387.709822587618 17421.16614405145 15957.307196664522 15337.37786811059 16215.85916449368 15799.205428703566 15601.483056786097 16457.98434505933 16670.483803256957 14413.59919004883 1.136551271879564 1.136961671162725 1.2086617585480697 1.1071008001722062 1.0640907705203526 1.1250388574485362 1.0961318696589926 1.0824141042826683 1.141837241902907 1.1565802256223612 1.0 13.815143012443947 -14.999999999998506 0.25353193623098386 0.19492885631578663 1.1361178165416 0.0 0.05939335644480788 22.049159809587636 0.2846606306651723 8.932322831780334 0.018765154889578948 1.00000000000344e-15 14.999999999998506 0.9411889602258133 VEMY(ph)SGS(ph)DDDDDFNKLPK ddPTM_A549_PD325901_60min_R1 1 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 2 VEMY(0.649)S(0.479)GS(0.872)DDDDDFNKLPK 79.568 0.00010848 13524000.0 7891.7 8124.9 8042.3 8520.3 8894.2 9557.5 8632.2 9713.4 8293.8 9328.0 11194.0 True False 8692.85957443752 8809.61383733903 8588.098840278599 9046.579579994732 8269.502075324273 9479.666888779026 8960.703094721086 9519.658616985114 7945.240428466417 8739.028488073563 9817.20896461251 0.8854715842121866 0.8973644005230512 0.8748004520669359 0.9215021919778199 0.8423475659052221 0.9656173076227468 0.9127546461546435 0.9696909428433319 0.8093176438543925 0.89017443955554 1.0 13.261097208871927 -7.255717543698902 24.7759495811218 0.9165489968578171 0.8865625406704503 0.12603903157519747 0.05030486616266735 1317.218907067189 5703642.531614555 0.010462843992774381 0.01779510105049226 5.549865475721815e-08 7.255717543698902 -0.02998645618736684 VEMY(ph)SGSDDDDDFNKLPK ddPTM_A549_MK2206_60min_R1 1 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VEMY(0.461)S(0.461)GS(0.078)DDDDDFNKLPK 54.805 0.0025674 9817200.0 5762.6 7666.1 6527.8 5419.2 8637.6 6974.1 6501.1 6335.4 10437.0 9145.4 9269.5 True False 6735.18599795664 8056.271745439463 7453.540197792953 6746.904243277136 7367.020482159533 7712.094632967089 7682.265718398559 7233.462351348779 8073.036164464198 7079.447788243847 6967.627324814713 0.9666398163934157 1.1562432044474624 1.0697386427726547 0.9683216292651751 1.0573212571117874 1.1068466026449217 1.1025655305987323 1.038152876745763 1.158649248606143 1.0160485712303948 1.0 12.766451745708487 -7.010504641254865 24.67688544089963 1.0780653565568012 1.04590342430149 0.036758057364594476 0.06360410871355049 1299.2718104469332 3052182.8943835073 0.010572112254225384 0.01911800130587355 9.761023508816172e-08 7.010504641254865 -0.032161932255311276 VEMYS(ph)GS(ph)DDDDDFNKLPK ddPTM_A549_PD325901_60min_R1 1 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 2 VEMY(0.076)S(0.962)GS(0.962)DDDDDFNKLPK 78.987 9.856e-05 6748900.0 5690.7 5783.3 6576.7 5869.2 6724.3 6552.6 7306.2 6065.9 6969.6 7773.0 8185.2 True False 6268.415674728077 6270.678987493116 7023.034410909844 6231.727154079677 6252.008365575652 6499.237798107605 7584.241439106044 5944.910865893503 6676.691949436874 7282.211453451518 7178.472290257846 0.873224193291818 0.8735394849964487 0.9783466630415287 0.8681132840112751 0.8709385664217816 0.9053789630041403 1.0565258362003962 0.8281582244123932 0.9300992856792168 1.014451426292257 1.0 12.809461129576706 -14.999999999999998 0.1368459144976438 1.3254883368771317 0.8748920128367135 0.2996292852930098 0.05917487556008405 67.45759248438273 0.6236800392844005 5.912754028143949 0.14508568908509267 1.000000000000004e-15 14.999999999999998 -0.4505963240404183 VEMYS(ph)GSDDDDDFNKLPK ddPTM_A549_MK2206_60min_R1 1 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VEMY(0.007)S(0.496)GS(0.496)DDDDDFNKLPK 61.181000000000004 0.00087462 3513300.0 1255.7 2036.5 1983.7 1457.3 2430.2 2114.1 2111.7 1671.5 2460.8 2450.2 2079.2 True False 1467.6314610825252 2140.149151405207 2265.01848867335 1814.3385654206832 2072.720799266473 2337.812658773997 2495.3685557124545 1908.4402437540623 1903.4327290901128 1896.6981182621953 1562.8772569992711 0.9390574048664461 1.3693648313203426 1.4492619164618161 1.1608963898445988 1.3262211027666388 1.4958389395611298 1.5966503732376076 1.221106926476282 1.2179028906881078 1.213593780169187 1.0 10.609988763145584 -9.63524257709041 0.8510812923020304 1.0330326209930583 1.331751533789162 0.14925441786961047 0.17708099893553716 0.43728569266677275 0.6692563346674321 0.058004676831149814 0.035955941980801376 2.3161006204346709e-10 9.63524257709041 0.29871891279610363 VEMYS(ph)GSDDDDDFNKLPK ddPTM_A549_PD325901_60min_R1 6 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VEMY(0.216)S(0.734)GS(0.05)DDDDDFNKLPK;VEMY(0.123)S(0.697)GS(0.179)DDDDDFNKLPK;VEMYS(0.856)GS(0.144)DDDDDFNKLPK;VEMYS(0.987)GS(0.013)DDDDDFNKLPK;VEMY(0.001)S(0.883)GS(0.117)DDDDDFNKLPK;VEMYS(0.53)GS(0.47)DDDDDFNKLPK 171.85 7.009399999999999e-31 45488200.0 14522.2 15927.7 15734.8 14463.199999999999 18755.1 16179.499999999998 16411.3 18144.6 16787.4 17328.2 17640.3 True False 15996.483053321406 17269.98317726801 16802.65814903891 15356.559015689556 17437.806477582493 16047.739516296133 17035.841002107936 17782.691718836675 16081.883957756052 16234.09449475088 15470.65493107504 1.033988743501102 1.116305887126909 1.0860986961378314 0.992625010647978 1.1271537342970623 1.0373018846191144 1.1011712870596704 1.1494466005519635 1.0395089302556462 1.04934759175207 1.0 13.91724665234247 -9.068622013025049 3.623564242302752 1.0156640631966087 1.0803370459029773 0.19078977270920228 0.044927043306387346 0.18709874101201446 5.133169133071493 0.007914641465809539 0.007846295555668733 8.538429304980729e-10 9.068622013025049 0.06467298270636856 VEMYSGS(ph)DDDDDFNKLPK ddPTM_A549_MK2206_60min_R1 1 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VEMY(0.238)S(0.347)GS(0.414)DDDDDFNKLPK 62.273999999999994 0.00066128 7901700.0 3368.5 3953.8 3325.8 3190.8 4959.9 3238.9 3247.2 3302.6 5732.6 4917.3 5126.3 True False 3937.020448081933 4155.031531954778 3797.448449679801 3972.5461432404572 4230.305280339798 3581.6382481921855 3837.174207562383 3770.753663788315 4434.175253081102 3806.47851478683 3853.2982313175085 1.021727416809832 1.078305203107547 0.9855059799981764 1.030946971857451 1.0978400908494914 0.9294993621522937 0.9958155266508888 0.9785782042878706 1.1507480051874888 0.9878494438478306 1.0 11.91187813434816 -8.726451012424198 24.999915786716493 1.0711866790686566 1.015752326502711 0.006892372312863548 0.05984398394943858 282.4379381719403 201807.75496009502 0.011396291586757574 0.012921951789993693 1.8773661696974308e-09 8.726451012424198 -0.05543435256594553 VEMYSGS(ph)DDDDDFNKLPK ddPTM_A549_PD325901_60min_R1 2 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VEMYS(0.206)GS(0.793)DDDDDFNKLPK;VEMYS(0.139)GS(0.861)DDDDDFNKLPK 134.87 2.097e-13 16274300.0 10394.2 10820.7 11444.3 10716.4 11932.400000000001 12175.099999999999 12283.9 11959.5 12754.8 12797.2 14505.0 True False 11449.411532194386 11732.598364249956 12220.979018166478 11378.327689289754 11094.309388545265 12075.95002224153 12751.370536508004 11720.958390453754 12218.760112011796 11989.182608016185 12720.976954770806 0.9000418421401559 0.9223032480889627 0.9606950049212367 0.8944539188888703 0.8721271509248758 0.949294229930401 1.0023892490211452 0.9213882260873045 0.960520576010425 0.9424734162040775 1.0 13.634921851561634 -7.516396329794604 19.631574421169134 0.9768212302385065 0.9123868000829635 0.41012595700196763 0.03050502899296741 11.373890776278552 34444.60571281231 0.00472109517185502 0.007173628053827034 3.04511480100957e-08 7.516396329794604 -0.06443443015554307 VENMSSNQDGNDS(ph)DEFM ddPTM_A549_MK2206_60min_R1 11 VENMSSNQDGNDSDEFM 17 0 Q86WR0-2;Q86WR0 Q86WR0-2 CCDC25 Coiled-coil domain-containing protein 25 1 VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMS(0.005)S(0.023)NQDGNDS(0.971)DEFM;VENMS(0.006)S(0.025)NQDGNDS(0.969)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM 165.66 2.3203000000000002e-23 67875340.0 9264.66 9792.08 8569.710000000001 7315.549999999999 12793.609999999999 9836.499999999998 8656.109999999999 9607.46 13211.249999999998 13204.059999999998 13523.360000000002 True False 10828.308108810077 10290.455046644682 9785.02373976352 9107.860078407519 10911.686916592682 10877.391901059742 10228.813140497301 10969.346876612271 10218.922969031097 10221.253675382059 10165.136486251284 1.0652398148766382 1.0123282712989536 0.9626062328821772 0.8959899447219651 1.0734422436286157 1.07006845562495 1.0062642202917926 1.079114568845063 1.0052912701027243 1.0055205544172157 1.0 13.311341965781375 -5.270563744740512 5.460914886389156 1.00745028359091 1.067105992592469 0.0838424796422994 0.0503786995629191 0.2612816949980675 29.025069498267428 0.006815668304991057 0.05727018970291382 5.36335143629644e-06 5.270563744740512 0.05965570900155903 VENMSSNQDGNDS(ph)DEFM ddPTM_A549_PD325901_60min_R1 12 VENMSSNQDGNDSDEFM 17 0 Q86WR0-2;Q86WR0 Q86WR0-2 CCDC25 Coiled-coil domain-containing protein 25 1 VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMS(0.004)S(0.004)NQDGNDS(0.992)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM 185.62 9.5243e-40 178522300.0 23708.839999999997 23279.32 23055.97 24213.3 27156.96 25584.82 24117.2 26572.81 23888.230000000003 26678.920000000002 29631.109999999997 True False 26115.743983274457 25241.149995180636 24620.686771010525 25708.900548605845 25249.54881602597 25376.465708540032 25034.993243438235 26042.794458583812 22884.290766657534 24994.408438147042 25986.671317082306 1.004966879544411 0.9713113960304873 0.9474351859303407 0.9893110292931643 0.9716345932858361 0.9765185159308513 0.9633782233194874 1.002159689512239 0.8806164701677115 0.961816468649334 1.0 14.665484227599993 VEPEVLSTDTQT(ph)SPEPGTR ddPTM_A549_MK2206_60min_R1 1 VEPEVLSTDTQTSPEPGTR 19 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VEPEVLSTDT(0.045)QT(0.477)S(0.477)PEPGT(0.001)R 165.45 3.5616999999999996e-27 3942700.0 1068.1 927.35 955.76 647.71 1501.6 1273.8 736.79 1059.1 1713.3 1441.9 1547.9 True False 1248.369167462167 974.548153967895 1091.301139655412 806.3989790768069 1280.7166291574922 1408.5926705199931 870.6552058357631 1209.23066835772 1325.240285577897 1116.173788556958 1163.5137101333066 1.0729303458909292 0.837590606350688 0.9379357803445041 0.6930721761623383 1.1007318762155 1.210636933842926 0.7482981921510921 1.0392921525773646 1.1389984269511195 0.9593129662641235 1.0 10.184272495340712 -6.807305538636486 24.99956510751613 1.0537899724266482 0.8857209559207943 0.1792642064228318 0.1403319909768052 130.33341138816155 71038.44904132384 0.019594199039957752 0.03702965834457867 1.5584556987287452e-07 6.807305538636486 -0.16806901650585393 VEPEVLSTDTQTS(ph)PEPGTR ddPTM_A549_MK2206_60min_R1 1 VEPEVLSTDTQTSPEPGTR 19 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VEPEVLSTDT(0.021)QT(0.133)S(0.845)PEPGTR 117.4 5.3928e-14 8285700.0 849.15 914.3 870.7 1057.8 1063.5 1241.4 1336.1 884.32 1786.9 1703.6 1849.9 True False 992.4657602757228 960.8339647089525 994.1783526177769 1316.961047486447 907.0605588099312 1372.7641240253715 1578.852075241469 1009.6750681164178 1382.1700030929455 1318.755576798415 1390.518775357325 0.7137377631026136 0.6909895657194881 0.7149693842589795 0.9471005144450668 0.652318095148943 0.9872316349504946 1.1354410333911151 0.7261139410771057 0.9939959298555792 0.9483910610696581 1.0 10.441407509340957 -6.683307659076436 0.5440243713299118 0.9949704061693934 0.6506000566523169 0.39160849651294094 0.12373728254309269 0.8500859903443881 0.3791252259609732 0.024653639744715766 0.14140460353456163 2.0734441459946785e-07 6.683307659076436 -0.34437034951707646 VEPSSQS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 VEPSSQSPGR 10 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPSSQS(1)PGR;VEPSSQS(1)PGR 135.08 6.8752e-07 117568000.0 6973.6 7773.0 7261.6 6584.1 9785.099999999999 6987.9 6276.7 8104.200000000001 9475.5 9969.5 10440.0 True False 8150.573191849244 8168.612498832637 8291.404071860858 8197.204795571482 8345.724752243583 7727.354939807392 7417.095143079213 9252.995168071604 7329.314379264206 7717.383025881546 7847.459870658133 1.0386256605560305 1.0409244052811666 1.0565717070899139 1.0445679150550429 1.0634937788530114 0.9846950563838094 0.9451587220996102 1.1791070385296019 0.9339728396278537 0.9834243376939145 1.0 12.938010031017992 VEPSSQS(ph)PGR ddPTM_A549_PD325901_60min_R1 3 VEPSSQSPGR 10 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPSSQS(1)PGR;VEPSSQS(1)PGR;VEPS(0.039)S(0.031)QS(0.93)PGR 167.84 2.3707e-10 146618000.0 9730.4 10450.2 9045.5 8804.9 10920.8 8941.5 9169.8 9646.9 9948.8 8780.599999999999 9529.2 True False 10718.223044858121 11330.875028980094 9659.382025010267 9348.758675621226 10153.76068271472 8868.683388544874 9518.761756907099 9454.485011653356 9530.686533883943 8226.191417493423 8357.168810575798 1.2825184327130577 1.355826989475328 1.155819900728408 1.1186514102468044 1.214976137596428 1.0612066824977575 1.1389935961161073 1.1313023855266546 1.1404204880752302 0.9843275400974757 1.0 13.028798562526623 -2.0000000000000004 0.12472097556297668 0.9759489924439243 2.0116155367086708 0.6993865485888342 0.05801603661499647 35.99067099973011 0.2948017731455278 0.19164169173681475 6.556005037953201 0.00999999999999999 2.0000000000000004 1.0356665442647466 VEPSSQS(ph)PGRS(ph)PR ddPTM_A549_MK2206_60min_R1 4 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 2 VEPS(0.002)S(0.008)QS(0.99)PGRS(1)PR;VEPS(0.066)S(0.072)QS(0.886)PGRS(0.975)PR;VEPS(0.005)S(0.032)QS(0.964)PGRS(0.999)PR;VEPS(0.018)S(0.135)QS(0.851)PGRS(0.996)PR 87.447 0.00033397 177062000.0 3928.73 4649.030000000001 4393.8099999999995 3548.2 5579.5 5338.000000000001 4458.79 3901.9 6010.0 6956.5 6396.599999999999 True False 4591.80357577347 4885.645769387355 5016.918327225812 4417.50915928475 4758.7629411189555 5902.863616922376 5268.894427487399 4455.006274067592 4648.744595997876 5385.021818500924 4808.147682821055 0.955004687601307 1.0161180753334993 1.0434201813622885 0.9187548824816654 0.9897289465798762 1.2276793489544033 1.0958262464176252 0.926553543682696 0.9668472980992852 1.119978456098795 1.0 12.231265493939436 -4.3972703464054295 16.293562960699514 1.0020675048125087 1.0175020455278405 0.0 0.09133211043074797 0.0 0.0 0.01120491839017025 0.0 4.006172575101247e-05 4.3972703464054295 0.01543454071533179 VEPSSQS(ph)PGRS(ph)PR ddPTM_A549_PD325901_60min_R1 4 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 2 VEPS(0.011)S(0.081)QS(0.909)PGRS(1)PR;VEPS(0.009)S(0.04)QS(0.951)PGRS(1)PR;VEPS(0.13)S(0.147)QS(0.73)PGRS(0.993)PR;VEPS(0.014)S(0.118)QS(0.869)PGRS(1)PR 107.69 0.00025465 263153000.0 5162.599999999999 4769.1 5244.5 4635.34 5487.4 4459.5 5451.700000000001 5221.2 4744.9 5199.75 5297.4 True False 5686.703351494751 5171.008794157909 5600.423307740456 4921.6544241790525 5101.983954502302 4423.183310542511 5659.167426784708 5117.059070047837 4545.488353834223 4871.4368976051155 4645.853382985379 1.2240384882401374 1.1130374482104448 1.2054670791486926 1.0593649903382114 1.098180147739363 0.9520712226394493 1.218111498634549 1.101425001655921 0.9783968582567144 1.0485558832841986 1.0 12.18172790997162 -3.4713152379069627 0.1812740974852963 0.9652288369101273 1.6342708587580577 0.3100883841482994 0.07540998925584673 20.596398450774174 0.3466264260157954 0.08417460752105918 3.456329768196825 0.00033781953678978433 3.4713152379069627 0.6690420218479304 VEPSSQSPGRS(ph)PR ddPTM_A549_MK2206_60min_R1 5 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPS(0.116)S(0.092)QS(0.365)PGRS(0.427)PR;VEPSSQSPGRS(1)PR;VEPSS(0.001)QS(0.043)PGRS(0.956)PR;VEPSSQS(0.012)PGRS(0.988)PR;VEPSSQSPGRS(1)PR 131.4 1.0815e-08 486093900.0 6084.219999999999 6168.61 5795.2 5818.960000000001 7045.19 5572.960000000001 5386.39 5419.05 7913.499999999999 9216.78 9460.119999999999 True False 7111.087591102581 6482.565900736394 6617.04650176932 7244.605461223042 6008.851883706757 6162.686928168551 6365.02734043852 6187.216932644604 6121.104885262762 7134.702996668289 7110.911117970344 1.0000248172321815 0.9116364686873912 0.9305483350856468 1.0188012957882193 0.8450185614782165 0.8666522230315202 0.8951071437741833 0.8701018519284504 0.8608045837886804 1.0033458270400568 1.0 12.795818708242775 -3.1019237420802916 1.550412231119998 0.9203442936828516 70.28845873261307 0.12514286754790838 0.0592656426726638 2285.9622222658986 8.045791809134428 0.009436550462110097 563107.2338027817 0.0007908174757259793 3.1019237420802916 69.36811443893022 VEPSSQSPGRS(ph)PR ddPTM_A549_PD325901_60min_R1 5 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EIZ7;K7EKH8 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPSSQSPGRS(1)PR;VEPSSQSPGRS(1)PR;VEPSSQSPGRS(1)PR;VEPSSQS(0.045)PGRS(0.954)PR;VEPSSQS(0.01)PGRS(0.99)PR 188.63 1.7135999999999998e-25 916458000.0 18532.82 18477.38 18375.69 18778.56 20576.120000000003 17851.02 17791.6 18914.6 19275.89 21421.4 22344.8 True False 20414.258243259006 20034.533658970748 19622.774825400564 19938.46900199591 19130.924314960448 17705.64721160681 18468.669073937086 18537.33346478335 18465.791377013124 20068.849148200996 19596.53125535765 1.0417281496018735 1.022351017019573 1.0013391946615928 1.0174488914483155 0.9762403389492766 0.9035092476769899 0.9424458254002371 0.9459497307573391 0.9422989781400529 1.0241021171904703 1.0 14.258310687789326 -6.814265826702937 4.252446806650781 0.9622686629897471 1.0198728046970003 0.4560404307271225 0.0310813621375184 0.16256430550304865 6.068548740374755 0.004663513687169882 0.009267303290595271 1.53367794864875e-07 6.814265826702937 0.05760414170725314 VEPVPVTKQPT(ph)PPSEAAASK ddPTM_A549_MK2206_60min_R1 2 VEPVPVTKQPTPPSEAAASK 20 1 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 VEPVPVT(0.11)KQPT(0.866)PPS(0.019)EAAAS(0.004)K;VEPVPVT(0.042)KQPT(0.894)PPS(0.061)EAAAS(0.003)K 80.904 7.4929e-05 28308000.0 10271.900000000001 10200.0 10763.9 10011.6 13068.099999999999 9234.0 9481.5 8465.0 13548.7 14077.2 13969.400000000001 True False 12005.54559615639 10719.136432277493 12290.382875551266 12464.442449437804 11145.799801207388 10211.135750966872 11204.16581947609 9664.939672975255 10479.941082828025 10897.150742959991 10500.412444173533 1.143340384007299 1.0208300377977368 1.1704666784180418 1.1870431295633603 1.061463048281686 0.9724509208810008 1.067021498350101 0.9204342900204968 0.9980504231186779 1.03778311574862 1.0 13.358158375962521 -7.00996794528919 5.227440099395851 0.9969899784335842 1.1258917310516514 0.5769747574365266 0.05238249595568994 0.0913637309728397 7.704679100767192 0.0070848141368414835 0.012995520106802754 9.773093522258946e-08 7.00996794528919 0.12890175261806724 VEQATKPS(ph)FESGR ddPTM_A549_PD325901_60min_R1 2 VEQATKPSFESGR 13 1 P38159;P38159-2;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 VEQAT(0.008)KPS(0.955)FES(0.037)GR;VEQAT(0.063)KPS(0.927)FES(0.01)GR 135.08 6.4708e-09 355780000.0 32286.0 31446.0 33492.0 31919.0 39243.0 29996.0 32723.0 32585.0 33309.0 35332.0 36479.0 True False 35563.65095230299 34096.0647797466 35764.968523756965 33890.5641366914 36486.707061000445 29751.722521142103 33968.29167171268 31935.06661256201 31909.138565167683 33101.131490203166 31992.314259433588 1.1116310831379232 1.0657579974756806 1.1179237686192374 1.059334559602798 1.1404835162945923 0.9299646871394807 1.0617641286046204 0.9982105812537554 0.9974001351202225 1.0346588628061697 1.0 14.965437737424896 -7.252130094648157 24.997263338864293 0.9996457356733444 1.0960227274085192 0.6231942457043357 0.036815646932276624 284.0077158637231 762616.557955957 0.004542613433359278 0.007798191536135496 5.595899489796817e-08 7.252130094648157 0.09637699173517489 VEQATKPS(ph)FESGRR ddPTM_A549_MK2206_60min_R1 1 VEQATKPSFESGRR 14 2 P38159;P38159-2;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 VEQAT(0.004)KPS(0.99)FES(0.007)GRR 77.39 0.00014853 7405700.0 1045.3 1248.1 1251.2 1204.8 2152.2 1502.7 1367.1 1461.2 2309.4 1891.7 1793.7 True False 1221.7210848686486 1311.6229589338757 1428.638974153397 1499.9760540855277 1835.6142310021012 1661.7147165884694 1615.4843739709695 1668.3295747373236 1786.3245873539918 1464.363656157291 1348.2747863984187 0.9061365659237559 0.9728157584534758 1.0596051995970728 1.1125150964903388 1.361454096390461 1.2324748140008817 1.1981862972356956 1.2373809786904433 1.3248965310148049 1.086101787951531 1.0 10.396898840954753 -5.978516011484932 1.7868588474506004 1.1846721497996053 0.9230032421515584 0.518929165845345 0.09737331087218988 0.3317478277478579 1.972464518712328 0.019064771142003948 0.09096569219104339 1.050712716678312e-06 5.978516011484932 -0.26166890764804696 VEQATKPS(ph)FESGRR ddPTM_A549_PD325901_60min_R1 2 VEQATKPSFESGRR 14 2 P38159;P38159-2;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 VEQATKPS(0.997)FES(0.003)GRR;VEQAT(0.013)KPS(0.953)FES(0.034)GRR 115.15 8.352500000000001e-07 50884000.0 5308.5 5063.9 5662.700000000001 4497.0 6039.6 5004.1 5105.7 5475.5 5263.0 5741.3 6000.4 True False 5847.41501208885 5490.652624758597 6047.00487458135 4774.769476571985 5615.399331488884 4963.348268704065 5300.0002074462445 5366.2868570533465 5041.814412575508 5378.793338183616 5262.388839669549 1.1111712171493655 1.0433764573549418 1.1490988330237244 0.9073387813113057 1.067081795468672 0.943173988073397 1.007147204230362 1.0197435082334816 0.9580847341740919 1.0221200869150096 1.0 12.361502138323065 -6.254079088961888 24.99583558523008 0.984216563060315 1.0954315970855542 0.5179596402870882 0.04715123797114181 299.69755563823963 1017781.3212954468 0.005722430643621095 0.0148186862221897 5.570842895949613e-07 6.254079088961888 0.11121503402523913 VEQATKPSFESGR ddPTM_A549_PD325901_60min_R1 1 VEQATKPSFESGR 13 1 P38159;P38159-2;H0Y6E7;H3BT71 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 0 55.724 0.017353 5301300.0 3037.3 3229.9 2799.4 2811.6 3949.1 3475.2 3254.4 3447.4 3955.6 3375.2 3435.0 False True 3345.644460057918 3502.095008335038 2989.3841181597186 2985.266146393107 3671.728839655402 3446.8991233988895 3378.247972876013 3378.6389025670173 3789.359887969538 3162.0892959847656 3012.5167762590663 1.1105811879369942 1.1625146906846204 0.9923211521072178 0.9909541981373465 1.2188243626031996 1.1441925072627273 1.1214038705109257 1.1215336389802948 1.257871796045283 1.0496503524576013 1.0 11.556753560181738 -6.7549545087393295 24.994597942075842 1.1316670282473362 1.0659964216916353 0.1373982110337233 0.07995161825191668 327.7392734092598 1263191.7391954816 0.014838175899410286 0.030319402191189646 1.7581077617044674e-07 6.7549545087393295 -0.0656706065557009 VEQMPQAS(ph)PGLAPR ddPTM_A549_MK2206_60min_R1 3 VEQMPQASPGLAPR 14 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR 96.70700000000001 1.6055e-05 18271700.0 7852.299999999999 8504.4 7447.799999999999 7157.200000000001 10047.4 7312.5 7146.400000000001 7691.4 11707.300000000001 12160.2 11288.3 True False 9177.57626969683 8937.237634770654 8504.010031729278 8910.714321298923 8569.440769710296 8086.303896355351 8444.808375500068 8781.679503924614 9055.615242716465 9413.202374374314 8485.103568769171 1.0816104005467204 1.0532856272568831 1.0022281947187652 1.0501597592864138 1.0099394427254302 0.9530000230189684 0.9952510664198118 1.0349525415631977 1.0672368544854487 1.1093797851827247 1.0 13.050716554004307 -5.533149512253906 4.51455479435561 1.0231794080997942 1.0767204921491822 0.1625131867375208 0.03947596589611311 0.21831314516003497 11.05600481895951 0.004953766718398302 0.02457444589025591 2.929884415866558e-06 5.533149512253906 0.053541084049387955 VEQMPQAS(ph)PGLAPR ddPTM_A549_PD325901_60min_R1 4 VEQMPQASPGLAPR 14 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR 163.8 1.9017e-19 96029000.0 26865.3 29518.300000000003 28753.4 32153.4 30877.100000000002 27490.0 24886.0 27095.9 32017.300000000003 29527.699999999997 33495.3 True False 29592.64547881145 32005.91073548286 30704.77863224034 34139.44249233038 28708.399016212246 27266.130554280455 25833.05034814172 26555.45101817765 30671.72422415995 27663.3159827712 29375.590444200938 1.0073889590414467 1.0895410186317183 1.0452480500967019 1.162170427082254 0.9772875568490776 0.9281900428885876 0.879405314327612 0.9039971832607022 1.0441228162688687 0.9417109771910046 1.0 14.842330229435078 -6.808738339359416 24.99952489802842 0.9917777265126206 1.0748458291813676 0.39331972287245 0.06264522590310896 130.19945327670953 68815.53507273454 0.010184545403047205 0.01924702460485929 1.5533225985677863e-07 6.808738339359416 0.08306810266874698 VEQNSRPVS(ph)CSGR ddPTM_A549_MK2206_60min_R1 2 VEQNSRPVSCSGR 13 1 O00401 O00401 WASL Neural Wiskott-Aldrich syndrome protein 1 VEQNS(0.002)RPVS(0.933)CS(0.065)GR;VEQNS(0.251)RPVS(0.72)CS(0.029)GR 72.184 0.00051565 28678000.0 2614.1000000000004 3691.1000000000004 3146.0 3067.0 3580.0 2459.1 2943.3 2567.4 3695.5 3854.3 3597.3 True False 3055.296171391118 3878.961224037201 3592.1501060474666 3818.4151376828618 3053.386742397322 2719.3203297815317 3478.059511307701 2931.3368123327446 2858.4751505008576 2983.610953072393 2703.9911295707393 1.1299209298353536 1.4345317858542639 1.3284622374547963 1.4121404082745783 1.1292147777430208 1.0056691015155903 1.2862688317545796 1.0840778212161135 1.0571318519652995 1.103410037275545 1.0 11.400874703536143 -7.490562802478243 0.5424837483694689 1.0165626018098266 1.3447903353968143 0.41426919906364246 0.11538807740802667 0.5164408232148621 0.2975474075142143 0.02679861809601836 0.06984268689305147 3.231745833140464e-08 7.490562802478243 0.32822773358698765 VEQNSRPVS(ph)CSGR ddPTM_A549_PD325901_60min_R1 1 VEQNSRPVSCSGR 13 1 O00401 O00401 WASL Neural Wiskott-Aldrich syndrome protein 1 VEQNS(0.008)RPVS(0.776)CS(0.217)GR 42.785 0.048212 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VERPPS(ph)PFSMAPQASLPPVPPR ddPTM_A549_MK2206_60min_R1 2 VERPPSPFSMAPQASLPPVPPR 22 1 A0A1B0GW38;A0A0U1RQX8;P22681 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 VERPPS(0.99)PFS(0.01)MAPQASLPPVPPR;VERPPS(0.956)PFS(0.044)MAPQASLPPVPPR 164.35 1.1122e-33 21009200.0 8260.9 8598.599999999999 7765.400000000001 7950.2 11394.8 7539.1 7575.5 8061.5 12441.3 12195.0 15188.0 True False 9655.137960385939 9036.23201240993 8866.650487444691 9897.99935689804 9718.640014600287 8336.882557950441 8951.8702911397 9204.24231230833 9623.3654146736 9440.141030204668 11416.400432524495 0.8457252369038452 0.7915132327231937 0.7766590301251389 0.8669982640674866 0.8512875903435017 0.7302549176708333 0.78412371255273 0.8062298065584764 0.8429421752987336 0.8268929498399856 1.0 13.478820223179834 -10.18952617825722 0.6407972843386552 1.0027874798214074 0.8046076299067534 0.11972070326128081 0.06203355044324686 0.27698264685044227 0.2124260535369753 0.027573841595647276 0.008803477284768607 6.46359031812189e-11 10.18952617825722 -0.19817984991465398 VERPPS(ph)PFSMAPQASLPPVPPR ddPTM_A549_PD325901_60min_R1 2 VERPPSPFSMAPQASLPPVPPR 22 1 A0A1B0GW38;A0A0U1RQX8;P22681 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 VERPPS(0.995)PFS(0.005)MAPQASLPPVPPR;VERPPS(0.68)PFS(0.32)MAPQASLPPVPPR 131.79 2.3721000000000003e-22 17176600.0 17037.4 13355.0 12619.9 12533.0 13869.0 14487.7 11440.599999999999 12707.6 12949.8 13581.699999999999 20504.4 True False 18767.024305729017 14480.472719376578 13476.362303623573 13307.13494549182 12894.889285452578 14369.716974581628 11875.97829353653 12454.13694908065 12405.56494014256 12724.14914413258 17982.48878810083 1.0436277495775403 0.805254094136204 0.7494158601973382 0.7400051851719918 0.7170803461857427 0.7990950053637846 0.6604190573106303 0.6925702607595486 0.6898691880932205 0.7075855458090018 1.0 14.134305084148826 -10.834903367885984 1.0854244019021784 0.9997625836098928 0.7563670727844397 0.0 0.12972351834998896 0.3746895622867226 0.7848403219243846 0.06868780733376166 0.016961543810575283 1.4625025504345945e-11 10.834903367885984 -0.24339551082545308 VES(ph)GYFSLEK ddPTM_A549_MK2206_60min_R1 1 VESGYFSLEK 10 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 VES(1)GYFSLEK 87.001 0.00073386 3178600.0 2138.1 2517.6 2643.1 2901.2 2914.9 2368.8 2361.2 2546.5 3304.3 3368.1 4104.5 True False 2498.9590084737965 2645.7350864609602 3017.9313239968396 3611.9941302398174 2486.1220713446824 2619.46484371782 2790.199476132144 2907.4741733291785 2555.8813258828263 2607.243870752958 3085.2393715628655 0.809972487550591 0.8575461310545675 0.9781838491410376 1.1707338378772594 0.8058117286650944 0.8490313159691393 0.9043705009892747 0.9423820401515108 0.828422374432527 0.8450702058272475 1.0 11.591166711401298 -4.312924137897667 16.706408653570758 0.9172611443798361 0.9196795295032271 0.0 0.10482010898704448 0.0 0.0 0.014084049951746674 0.0 4.8649217821069546e-05 4.312924137897667 0.002418385123390987 VES(ph)PPER ddPTM_A549_MK2206_60min_R1 1 VESPPER 7 0 O75864;O75864-2 O75864 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 VES(1)PPER 62.582 0.027172 3848100.0 727.29 608.17 667.31 713.47 1045.9 696.19 1018.3 738.13 1144.6 974.75 886.42 True False 850.0387714666789 639.123255295902 761.9445922652683 888.2701820288859 892.0494954953524 769.8603637064796 1203.3119289113008 842.7621879283192 885.3499275506099 754.5532980067237 666.297450052565 1.2757647074885525 0.959216120736288 1.1435502150055619 1.3331436011931446 1.33881571274958 1.1554304517385507 1.8059680834983989 1.2648437839013684 1.3287607921668674 1.1324571299908115 1.0 9.380022562138754 -10.684081550352252 0.9818733161597406 1.0026950328159647 1.2888855351214694 0.14757523770596304 0.19921340485844416 0.6662280667547366 1.1580198270932767 0.12986840942330902 0.03549126581731172 2.0697526611287882e-11 10.684081550352252 0.2861905023055047 VES(ph)PPER ddPTM_A549_PD325901_60min_R1 2 VESPPER 7 0 O75864;O75864-2 O75864 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 VES(1)PPER;VES(1)PPER 68.37100000000001 0.02282 7030400.0 2339.0 1979.82 1706.22 1434.73 2159.73 1814.44 1376.78 1469.45 1913.25 1966.68 2358.4 True False 2576.4535581192085 2146.666379578893 1822.0143495343539 1523.3500135917561 2008.038015464019 1799.663802215664 1429.174116302923 1440.140666988776 1832.8427560060977 1842.5034891642918 2068.331751129367 1.245667459638616 1.037873338455861 0.8809101095796082 0.7365114483012526 0.970849098249144 0.870104034922346 0.6909791504784248 0.6962812741246267 0.8861454430631421 0.8908162281791754 1.0 11.014251890683981 -5.423386554579356 2.4896796801788477 0.8910536238652095 1.2668728630970503 0.5448342904805523 0.10510316359002311 0.27853477734186327 2.6541517507544223 0.01728787014735158 0.18792459473616943 3.772362729467847e-06 5.423386554579356 0.3758192392318408 VESDLLDQEEMVDKPDIGS(ph)YER ddPTM_A549_PD325901_60min_R1 2 VESDLLDQEEMVDKPDIGSYER 22 1 Q8TDJ6;Q8TDJ6-3;Q8TDJ6-2;H0YLM8 Q8TDJ6 DMXL2 DmX-like protein 2 1 VESDLLDQEEMVDKPDIGS(0.999)Y(0.001)ER;VESDLLDQEEMVDKPDIGS(0.998)Y(0.002)ER 90.09700000000001 4.1933e-07 16375700.0 4908.200000000001 5169.6 5922.8 5326.6 6062.8 5781.3 5306.700000000001 6023.5 6126.8 5872.9 6971.5 True False 5406.476850774132 5605.260334712779 6324.756824689713 5655.611984413683 5636.969843524539 5734.219009583903 5508.649372437667 5903.356567155665 5869.311902520921 5502.084091724616 6114.04969597964 0.884271001972591 0.9167835744610612 1.0344627765862986 0.9250189752518028 0.9219699092781647 0.9378757607015366 0.900982106190589 0.9655395132030873 0.959971245634518 0.8999083038763279 1.0 12.57791256339204 -9.590471123017743 0.6231642356067856 0.9970801569567139 0.9353010757983821 0.0 0.04688466034392603 0.6632665191815663 0.5612569850162898 0.017305325377894545 0.009315398974287159 2.5676089271356583e-10 9.590471123017743 -0.06177908115833186 VESEES(ph)GDEEGKK ddPTM_A549_MK2206_60min_R1 2 VESEESGDEEGKK 13 1 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73;H7C003 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 VESEES(1)GDEEGKK;VESEES(1)GDEEGKK 140.84 1.1714e-12 39947000.0 15691.099999999999 15996.3 13771.6 14760.7 4910.9 2762.4 2285.3999999999996 2556.3999999999996 4508.3 19156.2 18379.8 True False 18339.374069436963 16810.443344278476 15724.619961997223 18377.072162633005 4188.513115429892 3054.715334467285 2700.6275973032366 2918.7775286466567 3487.177248275744 14828.801115441307 13815.588403325895 1.3274406803420717 1.2167736077192062 1.138179533360429 1.3301693439426006 0.30317298063262876 0.22110642307003792 0.19547684242338176 0.21126697202009903 0.2524088838254807 1.0733383684093756 1.0 13.754009387120274 -6.755252588700113 24.998760177850023 0.5185438352983717 1.242331741320992 0.6164394424676856 0.2970353679606679 99.98461764586013 404000.40876787173 0.05121139199195836 0.10452928682047276 1.7569014905882026e-07 6.755252588700113 0.7237879060226203 VESEES(ph)GDEEGKK ddPTM_A549_PD325901_60min_R1 2 VESEESGDEEGKK 13 1 C9JRC4;B5MBZ8;Q15435-3;Q15435;H7C118;C9JD73;H7C003 C9JRC4 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 VESEES(1)GDEEGKK;VESEES(1)GDEEGKK 157.03 8.901799999999998e-19 91994000.0 27960.2 31757.0 29362.2 29698.4 36547.0 30213.5 30652.6 32751.5 32344.0 33147.0 32371.0 True False 30798.69892078865 34433.27384120118 31354.895461252156 31532.80271803992 33980.064800305365 29967.451273253984 31819.10146674631 32098.24563944529 30984.694159289786 31054.092763097593 28389.572216676028 1.0848595634244007 1.2128845612184 1.104451142199117 1.1107177831836985 1.1969206348359658 1.0555795291501826 1.1208024278737028 1.1306350583398643 1.09141109710309 1.0938556074774677 1.0 14.793073489776607 -10.339341212046252 0.32037682759284813 0.9591444320451765 1.143693010680446 0.18447505426022914 0.05094580469769308 1.366466585300459 0.21806837352148706 0.09153517801185816 0.01933391451670663 4.57782079846397e-11 10.339341212046252 0.1845485786352694 VESEIKVPDVELK ddPTM_A549_PD325901_60min_R1 2 VESEIKVPDVELK 13 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 93.958 0.00017591 3659000.0 2345.4 2399.9 2338.6 2764.3 2736.0 2614.8 2408.3 2750.2 2340.5 2670.4 3089.5 False True 2583.503281407777 2602.147995449783 2497.311459144216 2935.0445328191986 2543.832798687593 2593.5059357341756 2499.9491743723256 2695.3451035098383 2242.1369243079935 2501.7904882666858 2709.511085954112 0.9534942649987487 0.9603754747264588 0.9216834255043569 1.0832376911222965 0.9388530690553798 0.9571859473757839 0.922656927787401 0.9947717569720571 0.827506089910852 0.9233365020116607 1.0 11.403816834579276 -7.686110282154028 1.5018768433157477 0.9223067874766575 0.9738049878051579 0.07951184890508123 0.05765102603152016 0.762515183556945 3.4960242316974792 0.012164560005648577 0.01979541480818069 2.0601067156148246e-08 7.686110282154028 0.05149820032850039 VESGYFS(ph)LEK ddPTM_A549_MK2206_60min_R1 2 VESGYFSLEK 10 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 VESGYFS(1)LEK;VESGYFS(1)LEK 129.84 1.2953e-06 34327000.0 6697.0 6802.0 5772.9 5687.2 8263.5 6401.2 6822.6 6678.299999999999 8866.099999999999 9357.4 9337.0 True False 7827.289874069972 7148.192746308969 6591.584026446726 7080.564255308105 7047.950096592258 7078.57073522733 8062.178106835156 7624.96947643599 6857.942506252374 7243.556841003451 7018.365211909479 1.1152582742185926 1.018498258565853 0.939190798344528 1.0088623264137182 1.0042153526910478 1.0085782830474095 1.1487259302429045 1.0864309915786605 0.9771424397543629 1.0320860517078598 1.0 12.776919307309786 -8.79712187744337 24.999988549515525 0.9892061415162409 1.0372451022757325 0.06470135753832118 0.05698360424661591 275.8617277013651 193273.83311142973 0.010186574479435979 0.010844616842635692 1.5954313534257637e-09 8.79712187744337 0.048038960759491656 VEST(ph)SPK ddPTM_A549_PD325901_60min_R1 2 VESTSPK 7 0 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 VES(0.044)T(0.478)S(0.478)PK;VES(0.033)T(0.483)S(0.483)PK 81.594 0.016261 22252000.0 9325.9 9647.5 8353.7 8625.9 9922.1 8255.099999999999 6322.200000000001 7363.799999999999 8950.3 9763.7 11405.0 True False 10272.658502635279 10460.528682904194 8920.632316878917 9158.702252159728 9225.205925386765 8187.87320256968 6562.794780640584 7216.92323221065 8574.150016506659 9147.218315716535 10002.257302251714 1.0270340176434665 1.0458167958296087 0.8918619114977875 0.9156635322806499 0.9223123987532276 0.8186025369219827 0.6561313693823058 0.7215294522153487 0.8572215008482577 0.9145153978049843 1.0 13.288038002675775 -5.765074638341552 22.2914568864318 0.8873754670898949 1.036425515297372 0.30286100374681213 0.09641572110627847 26.861097426844847 164739.72509028937 0.01637059574515726 0.05416376926564174 1.7176131708452582e-06 5.765074638341552 0.14905004820747714 VET(ph)PVLPPVLVPR ddPTM_A549_MK2206_60min_R1 1 VETPVLPPVLVPR 13 0 K7EJX0;B7Z5N5;Q15796-2;Q15796;H0YMP2;H0YL71;H3BP09;H3BVD1;P84022-3;P84022-2;P84022;O15198;O15198-2 K7EJX0;O15198 SMAD2;SMAD3;SMAD9 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog 9 1 VET(1)PVLPPVLVPR 100.07 0.00016454 7726000.0 1919.1 2495.6 2291.3 2308.7 2920.8 2213.1 2144.8 2676.0 3676.4 3026.7 3033.1 True False 2242.9971625097323 2622.615380430561 2616.2407940198837 2874.3316036414817 2491.154189160363 2447.288773063114 2534.482397259116 3055.331194906295 2843.7012700044233 2342.9663678655556 2279.897560698582 0.9838148876401521 1.1503215870922583 1.1475255902367136 1.2607283999026517 1.092660579187185 1.0734204971530572 1.1116650330914548 1.340117752470472 1.2472934394179915 1.027663000414654 1.0 11.154753288002857 -5.259132479285018 23.00856741435388 1.140729971885724 0.9838147405042186 0.1813536906809432 0.09812984536403845 110.18417050964413 1098709.5122553052 0.015585131085105331 0.14252994168167443 5.506397009914148e-06 5.259132479285018 -0.15691523138150543 VET(ph)SEHFR ddPTM_A549_MK2206_60min_R1 1 VETSEHFR 8 0 P42167 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 VET(0.5)S(0.5)EHFR 87.806 0.002405 10221000.0 1226.0 971.72 838.69 1207.2 1093.6 1096.0 941.26 1162.7 1328.7 1265.9 1105.5 True False 1432.9188271778091 1021.1763974483029 957.6288532870144 1502.9640541932672 932.7328886831599 1211.9779925340808 1112.2747581332128 1327.5162856194138 1027.7515714979002 979.9323107942673 830.9738397521618 1.7243850030287087 1.2288911498740671 1.1524175701760089 1.8086779418248915 1.1224575841777977 1.4585031857267055 1.3385195837993518 1.5975428131592517 1.2368037624438664 1.1792577141616545 1.0 9.698659249376972 -9.539165221284685 0.8868284750497005 1.0377639428491388 1.4137557870753608 0.24463390205206503 0.21825376502269855 0.3881770421547702 0.6467696827148106 0.06306199715361716 0.042390729230472025 2.8895803726394436e-10 9.539165221284685 0.375991844226222 VET(ph)VKSDNKDDDIDIDAI ddPTM_A549_PD325901_60min_R1 1 VETVKSDNKDDDIDIDAI 18 2 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VET(0.5)VKS(0.5)DNKDDDIDIDAI 80.061 0.00054826 3837000.0 1852.4 1943.9 1987.6 2025.6 2149.1 1970.4 2253.9 1817.0 1844.5 2567.4 3016.0 True False 2040.4542843351956 2107.719275117644 2122.4904884097514 2150.716711528621 1998.1546299925099 1954.3537156840391 2339.673397881406 1780.7585095910754 1766.982079421533 2405.2939258447755 2645.0511199992243 0.7714233834300314 0.7968538903392771 0.8024383621025721 0.8131096957888858 0.7554313846278691 0.7388718126871636 0.8845475159973816 0.6732416232437873 0.6680332436909768 0.9093563098491196 1.0 11.369079889744938 -10.932652881081964 1.1969814389558815 0.9996739686060385 0.7610732241433644 0.5519500901605766 0.06359810874255123 0.23336744858837455 0.5954799642372612 0.04547668086967797 0.010753908140504458 1.167742586768982e-11 10.932652881081964 -0.2386007444626741 VETDDVKKNS(ph)LDELR ddPTM_A549_PD325901_60min_R1 2 VETDDVKKNSLDELR 15 2 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 VET(0.154)DDVKKNS(0.846)LDELR;VET(0.018)DDVKKNS(0.982)LDELR 66.893 0.00065565 11216800.0 3177.3 3710.9 3624.0 3576.8 4731.5 4158.9 3957.5 4104.7 4548.3 3770.3 4365.1 True False 3499.857156995366 4023.6305664046804 3869.946432882337 3797.7308124978163 4399.175762788872 4125.031297278898 4108.104828127096 4022.8285384251453 4357.150768139308 3532.242614556577 3828.220372648746 0.9142256234778393 1.0510446564550122 1.010899597246728 0.9920355786284493 1.1491438147655753 1.0775323507368486 1.0731108526243744 1.0508351523247732 1.138166130473987 0.9226852873447873 1.0 11.902458166047268 -3.9436081476562292 0.7715471667115944 1.0687172187330778 1.010013097734342e-15 0.21263435472466918 0.06459458046197114 13.999994092080518 1.231793708646279 0.009158967805332584 20.543939147143764 0.00011386541998321179 3.9436081476562292 -1.0687172187330767 VETFSGVYKK ddPTM_A549_PD325901_60min_R1 1 VETFSGVYKK 10 1 P62081;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 0 79.97399999999999 0.0012345999999999998 2634900.0 2625.6 2780.6 2711.5 2902.1 4086.1 3336.4 3016.2 3483.3 3877.8 3618.4 2773.8 False True 2892.148979135438 3014.93092051655 2895.5186955740774 3081.3561258526925 3799.1064322797447 3309.229464579895 3130.983141527971 3413.822848904012 3714.8295514127503 3389.9336064799922 2432.6401845669257 1.1888930378950873 1.2393657474063668 1.1902782474546503 1.266671555210396 1.5617214812046223 1.3603448161278424 1.2870720303773033 1.4033406463322742 1.5270772780044692 1.3935203520793151 1.0 11.24830722954601 -3.845672200657927 12.466013457785781 1.2836654149145899 1.2873915824354134 0.0 0.15645690688929412 0.0 0.0 0.027063161267502925 0.0 0.00014266840282699324 3.845672200657927 0.0037261675208235534 VETGVLKPGMVVTFAPVNVTTEVK ddPTM_A549_MK2206_60min_R1 2 VETGVLKPGMVVTFAPVNVTTEVK 24 1 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 0 ; 107.75 1.8131e-11 25436000.0 2690.7599999999998 3621.7000000000003 3700.7 3279.5 3997.3 3201.6 2970.7799999999997 3408.3 4647.2 3852.0 4014.2 False True 3144.894505234063 3806.029060468566 4225.514907008853 4082.9776472223475 3409.3024651912906 3540.391186949921 3510.53227160082 3891.43696248099 3594.6166200534635 2981.830524669812 3017.363353716082 1.042265758733007 1.2613757821977887 1.4003997568953213 1.3531607461838797 1.1298945687109607 1.173339360203237 1.1634436625862006 1.2896812568789333 1.191310491534424 0.9882238812894346 1.0 11.559072722293593 -10.552543539076312 0.42413765636329054 0.9440294055808015 1.2433118486803658 0.44942289090605647 0.09708255408995178 1.392492469526792 0.35195363654418543 0.180125561088841 0.030036212927242636 2.801924707830578e-11 10.552543539076312 0.2992824430995643 VETGVLKPGMVVTFAPVNVTTEVK ddPTM_A549_PD325901_60min_R1 2 VETGVLKPGMVVTFAPVNVTTEVK 24 1 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 0 ; 140.66 4.2847e-28 51504000.0 5765.3 6097.2 6404.700000000001 6387.799999999999 7116.9 7159.6 7474.8 7000.5 7602.299999999999 7171.4 7646.5 False True 6350.58901181046 6611.032442125257 6839.361456589819 6782.359898253623 6617.033495972126 7101.294591357818 7759.257604367507 6860.869535713992 7282.801768710385 6718.596580121221 6706.0289751571845 0.9469969538360974 0.9858341600694172 1.01988247917308 1.0113824326407193 0.98672903449795 1.058941829458971 1.1570569756128493 1.0230897541794737 1.086008097443343 1.0018740755535942 1.0 12.711243001349596 -7.260262308954677 24.9592368108029 1.0509491288300794 0.9927541234857408 0.3410830458700155 0.044305835100839866 116.48058012095865 2469921.458019161 0.007232744318003016 0.012112969385926427 5.492090576025021e-08 7.260262308954677 -0.058195005344338635 VETS(ph)EHFR ddPTM_A549_PD325901_60min_R1 2 VETSEHFR 8 0 P42167 P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 VET(0.115)S(0.885)EHFR;VET(0.114)S(0.886)EHFR 123.86 0.00034732 19727200.0 3310.2 3482.6000000000004 3792.3999999999996 3428.2999999999997 3945.4 3375.9 3714.3999999999996 3292.9 3849.4 3696.8 3957.3 True False 3646.2490671595565 3776.0909241857653 4049.775069553802 3640.058304765786 3668.2887148910922 3348.407789676078 3855.7535245976705 3227.220526269922 3687.623104649088 3463.3834171001636 3470.577187391557 1.0506174824194106 1.088029662012453 1.1668880566225248 1.0488336977462844 1.0569679096081805 0.9647985360592716 1.1109833657079984 0.9298800608712182 1.062538853204605 0.9979272121313054 1.0 11.760959900243872 -6.585113766121379 3.0416845390127634 1.0252130336521474 1.101058439234114 0.3099193440444995 0.053401516068217816 0.24050335627390917 4.503108278206444 0.007237639457599081 0.016641573640317115 2.599478524516292e-07 6.585113766121379 0.07584540558196662 VETSEGLNS(ph)DLEMHADK ddPTM_A549_MK2206_60min_R1 1 VETSEGLNSDLEMHADK 17 0 P49454 P49454 CENPF Centromere protein F 1 VET(0.003)S(0.003)EGLNS(0.994)DLEMHADK 65.454 0.00042199 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VETTEDLVAK ddPTM_A549_PD325901_60min_R1 1 VETTEDLVAK 10 0 P38117-2;P38117 P38117-2 ETFB Electron transfer flavoprotein subunit beta 0 152.28 6.2376e-08 2193900.0 3185.9 3102.4 3497.6 3262.4 3416.9 2761.2 3308.9 3399.7 3422.9 3727.2 3708.1 False True 3509.3302226643805 3363.8501358737485 3734.96816877739 3463.9110385520235 3176.9087316650744 2738.713702672943 3434.8220001995574 3331.8903164869425 3279.0474164553884 3491.863955912066 3252.027207582601 1.0791208063948043 1.0343856066242052 1.1485045881746432 1.0651543844637532 0.9769010309193058 0.8421558393752706 1.0562094905573798 1.0245579461076244 1.0083087278020877 1.0737499205942216 1.0 11.66712361221042 -6.657767295292967 5.346639012918087 0.9957169108688588 1.085560901035116 0.307323935022056 0.061353204634958074 0.18103567857668215 7.95469786852746 0.008042434790026004 0.016934053279640524 2.199037850878947e-07 6.657767295292967 0.0898439901662571 VETVKS(ph)DNKDDDIDIDAI ddPTM_A549_MK2206_60min_R1 2 VETVKSDNKDDDIDIDAI 18 2 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VET(0.012)VKS(0.988)DNKDDDIDIDAI;VET(0.223)VKS(0.777)DNKDDDIDIDAI 115.5 1.7741999999999997e-10 17179400.0 6712.5 7268.1 6940.799999999999 5892.1 9674.8 7396.3 6607.3 8224.5 10885.7 10163.2 10979.3 True False 7845.405895131359 7638.015245434906 7925.109808027413 7335.664764506421 8251.64973613006 8178.9715567334115 7807.7608837235 9390.348061474893 8420.106330890861 7867.326061351051 8252.836796735326 0.950631411763148 0.9255017921178773 0.960289171253507 0.8888658463969963 0.999856163324866 0.9910497151681062 0.9460699485553998 1.137832758935636 1.0202681257700024 0.9532874883050182 1.0 13.010674395427689 -7.208906447379167 1.3751604617414608 1.0169016006188198 0.9343231473867865 0.31390247719077846 0.05108288775112449 0.33455356821818255 1.239329282482623 0.00740229918586157 0.015267892264353962 6.181495431648091e-08 7.208906447379167 -0.08257845323203339 VETVKS(ph)DNKDDDIDIDAI ddPTM_A549_PD325901_60min_R1 2 VETVKSDNKDDDIDIDAI 18 2 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VET(0.042)VKS(0.958)DNKDDDIDIDAI;VET(0.021)VKS(0.979)DNKDDDIDIDAI 117.43 1.481e-10 40732000.0 9702.7 9860.3 10616.2 11175.8 11459.5 11588.5 11663.4 11894.8 10840.099999999999 12578.8 12090.0 True False 10687.710961249784 10691.262085725853 11336.679172396654 11866.103783916664 10654.624253128835 11494.127098154931 12107.257069457377 11657.548882709914 10384.528294463189 11784.572421288567 10603.006644824478 1.0079887072848956 1.0083236240302136 1.069194762594089 1.1191263177891835 1.004868204843534 1.0840441285364493 1.1418701765472485 1.0994569062540556 0.9793946794829246 1.11143686088708 1.0 13.37218580061276 -8.7710286784493 24.99149495339666 0.9902697039617014 1.067734857206951 0.0 0.05669494438023449 150.96450736991838 393440.1928900936 0.007868273796091991 0.008429269589064191 1.6942259192735525e-09 8.7710286784493 0.0774651532452495 VETVNREPLTMHSDREDDT(ph)ASVSTATR ddPTM_A549_MK2206_60min_R1 1 VETVNREPLTMHSDREDDTASVSTATR 27 2 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 VETVNREPLTMHSDREDDT(0.399)AS(0.349)VS(0.073)T(0.083)AT(0.095)R 68.907 8.5844e-05 12674000.0 1378.4 1714.7 1311.4 1353.4 1563.3 1194.0 1443.5 1278.9 1395.6 1517.6 2194.9 True False 1611.0402213555406 1801.970905924139 1497.3762393740137 1684.9830607564338 1333.340640890987 1320.348287486946 1705.7652650333525 1460.1879914669887 1079.4988283152472 1174.7731059810246 1649.8457538417183 0.9764792966883008 1.0922056814876133 0.9075855945244127 1.0212973284520066 0.8081607858105893 0.8002858960678433 1.0338937813195106 0.8850451553224867 0.6543028800126314 0.7120502648478065 1.0 10.688115436060682 -6.757368791710532 24.958043490380987 0.8476698737672681 0.9994639476851731 0.31464384652171884 0.11156656238802029 126.59805144766624 776200.7130126536 0.019943219475019383 0.040353937755658376 1.7483613945223657e-07 6.757368791710532 0.151794073917905 VETVNREPLTMHSDREDDTAS(ph)VSTATR ddPTM_A549_PD325901_60min_R1 1 VETVNREPLTMHSDREDDTASVSTATR 27 2 Q5W0G0;Q5W0F9;B4DN67;Q96J84-3;Q96J84;Q96J84-2 Q5W0G0 KIRREL Kin of IRRE-like protein 1 1 VETVNREPLTMHSDREDDT(0.069)AS(0.887)VS(0.018)T(0.026)ATR 140.36 1.6362999999999998e-26 19033000.0 3283.0 2831.3 2657.4 3372.0 3781.6 3377.6 3157.9 2700.1 3637.4 3855.2 4044.9 True False 3616.287743183139 3069.9035874482142 2837.747144244351 3580.2807816323643 3515.9934618117686 3350.093945439709 3278.075612569184 2646.2443873125276 3484.53272739923 3611.7820140674526 3547.4029427337114 1.01941837495245 0.8653946667480844 0.7999506089538047 1.009268143323272 0.9911457814550557 0.9443793105888468 0.9240776042326397 0.7459666776036641 0.982277114737343 1.0181482262863912 1.0 11.792547497220704 -8.965792323980867 24.99970607408161 0.9921812630216305 0.9112894918618077 0.18911921374143803 0.08062083025787421 224.43190272848923 164020.74932645762 0.01390274792331544 0.014729045557070955 1.0819512077078542e-09 8.965792323980867 -0.08089177115982271 VETVSQPS(ph)ESPKDTIDK ddPTM_A549_MK2206_60min_R1 1 VETVSQPSESPKDTIDK 17 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 VETVS(0.023)QPS(0.487)ES(0.487)PKDT(0.003)IDK 75.773 0.00012937 8072400.0 4118.0 3832.4 3801.2 3577.2 5989.6 5227.1 3834.2 4185.7 6201.0 5625.4 6123.5 True False 4813.017724566246 4027.4527904961033 4340.267318216031 4453.614160586612 5108.5377743751405 5780.228252531836 4530.824509311309 4779.035793168639 4796.4834009622 4354.618232990024 4602.86594999761 1.0456567227574258 0.8749880692263468 0.9429488856216385 0.9675741611786293 1.1098602109795948 1.2557889617738784 0.9843485685942389 1.0382739460772523 1.0420645426279882 0.9460667071984324 1.0 12.168316711996912 -6.5888345374752975 8.812043573668808 1.0422853602609092 0.9479988051802771 0.22083186154607448 0.08499476995085072 0.34552331121990737 42.35402417224748 0.011839087688178103 0.024689643312594965 2.5773029005811304e-07 6.5888345374752975 -0.0942865550806321 VETVSQPSES(ph)PKDTIDK ddPTM_A549_MK2206_60min_R1 1 VETVSQPSESPKDTIDK 17 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 VETVS(0.002)QPS(0.181)ES(0.815)PKDT(0.002)IDK 79.942 8.1269e-05 8193700.0 4903.7 6110.5 4541.1 3899.9 6922.6 6012.7 5440.6 6377.2 7478.2 6612.0 6790.0 True False 5731.324676045531 6421.4983499442715 5185.0962640089465 4855.375675073166 5904.294710312766 6648.959923092759 6429.086595732914 7281.187629355917 5784.399640231502 5118.344607766565 5103.855605533403 1.1229402081500603 1.2581661485450981 1.0159175072248254 0.951315250731066 1.1568302802123864 1.3027327645954978 1.2596529158784875 1.4266053337131903 1.1333392022219986 1.0028388346679427 1.0 12.31737179869284 -9.867485449263155 1.2490193045360287 1.024053047210598 1.1804493967575138 0.22483822915806162 0.12625232218775442 0.49202908637156934 1.5489334890943556 0.03994601861520876 0.025493916376291465 1.3567959880513954e-10 9.867485449263155 0.15639634954691584 VETVSQPSES(ph)PKDTIDK ddPTM_A549_PD325901_60min_R1 2 VETVSQPSESPKDTIDK 17 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 VETVS(0.046)QPS(0.033)ES(0.92)PKDT(0.001)IDK;VETVSQPS(0.004)ES(0.996)PKDTIDK 143.4 8.513299999999999e-17 21025400.0 12208.7 11998.9 12673.1 12309.5 15044.0 13972.6 13360.6 13132.2 14029.2 13795.5 16322.1 True False 13448.118236430078 13010.089413143216 13533.172775541161 13069.829858097153 13987.361338982508 13858.811778200763 13869.044944200852 12870.2679689884 13439.601511857172 12924.449775645242 14314.585174316764 0.9394696439096747 0.9088694680783292 0.9454114534749066 0.9130428649477771 0.9771405296521368 0.9681602092854391 0.96887508616629 0.8991017072629001 0.9388746755980405 0.9028867842313933 1.0 13.805198242298346 -8.93301776203327 0.008171859526824046 1.9145659957247074 4.0350696808118986e-07 0.0 0.03563831580378502 1213.889979115323 7.17796211631376 845.5583387986374 835.490551256953 1.1667618971651377e-09 8.93301776203327 -1.9145655922177394 VETVSQPSES(ph)PKDTIDKTK ddPTM_A549_MK2206_60min_R1 1 VETVSQPSESPKDTIDKTK 19 2 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 VETVS(0.001)QPS(0.056)ES(0.938)PKDT(0.005)IDKTK 80.786 4.99e-05 6648900.0 1576.6 1563.9 1640.5 1385.4 2243.2 2219.9 1417.8 1628.7 2817.3 2186.8 2019.0 True False 1842.6915358307772 1643.495830043017 1873.1475680136268 1724.8230621929683 1913.2282515490701 2454.8083445496404 1675.3959076995397 1859.57321268456 2179.1860483036307 1692.8003612014409 1517.6265784347477 1.2141929787044818 1.0829382230100955 1.2342611777039099 1.1365266572834534 1.2606712868209904 1.6175312026239583 1.1039579376815556 1.2253167143412116 1.435917161223681 1.115426143200104 1.0 10.567601134892218 -5.79937498727052 22.789765744543494 1.2320885287897883 1.1485655407840658 0.040978702538610356 0.16310017999608437 198.21189289461378 119075.4124698767 0.026709766414490365 0.08304938328734247 1.5871757256189335e-06 5.79937498727052 -0.08352298800572244 VETVSQPSES(ph)PKDTIDKTK ddPTM_A549_PD325901_60min_R1 1 VETVSQPSESPKDTIDKTK 19 2 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 VET(0.001)VS(0.002)QPS(0.12)ES(0.865)PKDT(0.011)IDKT(0.002)K 57.068000000000005 0.0014098 6395600.0 2114.5 2461.8 2309.5 2337.8 2986.6 2689.8 2288.5 2994.7 2469.9 2575.5 3132.8 True False 2329.1624833873725 2669.2645256878527 2466.2365581517 2482.2005964709792 2776.8315192106606 2667.895160600347 2375.5901198152515 2934.968359203299 2366.0986923086157 2412.8824904624207 2747.48546045543 0.8477433336448976 0.9715299913708694 0.8976340707342236 0.903444488495864 1.0106810606198318 0.9710315846978532 0.8646415618961885 1.0682379948670562 0.8611869749135653 0.8782148350522865 1.0 11.423896131192608 VEVAAPAHRGT(ph)PDTDLEVQR ddPTM_A549_MK2206_60min_R1 2 VEVAAPAHRGTPDTDLEVQR 20 1 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 VEVAAPAHRGT(1)PDTDLEVQR;VEVAAPAHRGT(0.992)PDT(0.008)DLEVQR 174.99 7.8235e-35 39766000.0 1006.21 1199.85 1436.68 1120.99 1221.9 1141.78 1481.99 1290.1100000000001 2056.24 1862.8200000000002 1948.31 True False 1176.0336485273924 1260.9172400262885 1640.4228271952545 1395.6326003231536 1042.1601286411426 1262.602401747776 1751.2483998107211 1472.9870432961745 1590.5049231405446 1442.0076682153226 1464.4908563794968 0.80303242823569 0.8609935900477511 1.120131832881972 0.9529814366840268 0.7116194164691222 0.8621442709920171 1.1958069879248985 1.0058014612243342 1.086046332219908 0.984647778395997 1.0 10.516183470370226 -7.727844358168827 24.999445817744657 1.0490787118044902 0.8899288046334379 0.37604505039669844 0.10839840867864371 169.67931532829567 126265.12451030381 0.01686704917093462 0.025017099142453602 1.8713526728831153e-08 7.727844358168827 -0.15914990717105226 VEVAAPAHRGT(ph)PDTDLEVQR ddPTM_A549_PD325901_60min_R1 2 VEVAAPAHRGTPDTDLEVQR 20 1 P0C7T5 P0C7T5 ATXN1L Ataxin-1-like 1 VEVAAPAHRGT(1)PDTDLEVQR;VEVAAPAHRGT(1)PDTDLEVQR 171.78 1.208e-34 89377000.0 3551.6 3574.6 4045.6000000000004 3588.1 3782.6 3818.8999999999996 3300.2 3670.3999999999996 3209.6000000000004 3605.7 3616.7 True False 3912.1558174502698 3875.8440870597906 4320.158744169092 3809.728787833654 3516.9232252615816 3787.80014455226 3425.7909169387317 3597.190992626902 3074.711673684656 3378.03548664739 3171.868828150265 1.2333914261302277 1.221943370627991 1.3620231410037449 1.2010990978007654 1.1087858344106056 1.1941856204568166 1.0800544103636676 1.1340919777961536 0.9693691133746322 1.0649984818626168 1.0 11.631117394641535 -7.745690268245398 0.6337741994859305 0.9817525939341374 1.26578756089479 0.6723593828460783 0.062288875215316626 0.23564963209963102 0.1921595380328757 0.013269724854732077 0.02647933650199583 1.7960140581757893e-08 7.745690268245398 0.28403496696065256 VEVAHIS(ph)GGE ddPTM_A549_MK2206_60min_R1 2 VEVAHISGGE 10 0 O95625 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 1 VEVAHIS(1)GGE;VEVAHIS(1)GGE 94.616 0.00057448 6879600.0 913.3 1198.8 1013.5 1006.8 1126.2 840.85 834.74 743.35 1453.8 1345.4 1592.0 True False 1067.442711958803 1259.8137995112013 1157.229539885284 1253.466045196969 960.537471868119 929.8281888889431 986.4014529504266 848.722138913899 1124.516621241549 1041.473205579119 1196.6624630352255 0.8920165417834965 1.0527728899557842 0.9670475807773535 1.0474683412544472 0.8026803727358532 0.7770179291247412 0.8242938033240459 0.7092410476060163 0.9397107839326011 0.8703149281857784 1.0 10.224800560104395 -4.931357949763171 14.214147915230399 0.9322560202609834 0.5117271230792316 0.0 0.1127226681622661 2142954.440332128 10861025.501227861 0.016579050461366502 26021004.203840587 1.1712296286931095e-05 4.931357949763171 -0.4205288971817518 VEVAHIS(ph)GGE ddPTM_A549_PD325901_60min_R1 2 VEVAHISGGE 10 0 O95625 O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 1 VEVAHIS(1)GGE;VEVAHIS(1)GGE 89.54799999999999 0.00068055 21246000.0 3167.0 3554.3 2972.9 3610.0 3684.3 3963.5 3380.0 3444.8999999999996 3471.4 3657.7 3574.3 True False 3488.511508577824 3853.8333348169344 3174.6588714999743 3832.9815010951475 3425.527478144992 3931.2225700942354 3508.6277496069697 3376.1887670282294 3325.5091301186817 3426.752197773011 3134.683759354519 1.1128751020473475 1.2294169462282534 1.0127525183445256 1.2227649725930947 1.0927824754004412 1.2541049981079226 1.119292413193684 1.077042861804803 1.0608754775325266 1.0931731749803792 1.0 11.61410418962756 -8.724481954851736 1.0459207461316544 1.0195123916985582 1.1522626908093867 0.26498142118206347 0.06988379612491029 0.30249198570282926 0.6563800347315012 0.013349457797390822 0.014292488268809543 1.885897327819396e-09 8.724481954851736 0.13275029911082847 VEVERDNLAEDIMR ddPTM_A549_MK2206_60min_R1 2 VEVERDNLAEDIMR 14 1 P08670;B0YJC4 P08670 VIM Vimentin 0 ; 138.19 2.297e-09 5381200.0 866.8 1087.16 827.02 857.88 1078.31 956.7 1123.53 851.41 1348.62 1404.86 1402.33 False True 1013.0946487746527 1142.4918003641956 944.3038718065395 1068.060638511697 919.6920274286197 1057.9373589939364 1327.6608577921183 972.0999748337706 1043.1597233036027 1087.5011502823556 1054.0927586609212 0.9611057854734237 1.08386267809635 0.8958451370125593 1.0132510917431214 0.8724962958639058 1.0036473074133432 1.2595294359850528 0.9222148305702137 0.989628013979332 1.0316939769739764 1.0 10.041786112331565 -7.496908075368027 24.879489675726013 1.011824534807471 0.9674392772663941 0.0907826868034306 0.09546443955503421 1939.782972768467 1858282.287390272 0.013910818900418771 0.022187332471616198 3.1848715739589334e-08 7.496908075368027 -0.04438525754107692 VEVERDNLAEDIMR ddPTM_A549_PD325901_60min_R1 4 VEVERDNLAEDIMR 14 1 P08670;B0YJC4 P08670 VIM Vimentin 0 ;;; 164.09 1.7707000000000001e-19 28015800.0 2921.87 2924.2799999999997 2927.01 2892.05 3891.4399999999996 3953.94 3649.51 3965.21 3775.45 3672.52 3752.9100000000003 False True 3218.4960914329904 3170.7193383615513 3125.6545001409863 3070.6853601778994 3618.1186791392006 3921.7404235646313 3788.3941001384997 3886.1207759029326 3616.7809659810387 3440.636460443816 3291.3258616565977 0.9778722091689365 0.9633562496196161 0.9496642482454699 0.9329630335151181 1.0992891105951208 1.191538178960722 1.1510237087954933 1.1807158996851685 1.0988826746436562 1.045364878794489 1.0 11.684453153945034 -6.7625588097096605 24.99682104201411 1.0802089773491557 0.9560419691944274 0.593644512766666 0.057976712006139464 24.485460645971575 546778.5092256923 0.0109256240798358 0.021505986529173047 1.7275920238980605e-07 6.7625588097096605 -0.12416700815472825 VEVIGTDES(ph)QEVPYTIR ddPTM_A549_PD325901_60min_R1 2 VEVIGTDESQEVPYTIR 17 0 P98088 P98088 MUC5AC Mucin-5AC 1 VEVIGTDES(1)QEVPYTIR;VEVIGTDES(1)QEVPYTIR 214.22 3.985e-55 9674400.0 3340.8999999999996 3565.0 3303.4 4070.0 4107.0 3577.2 3468.5 3877.8 3914.8999999999996 3973.9 3660.5 True False 3680.0657085594075 3865.4350613685883 3527.5885889579245 4321.394656359346 3818.5384883808306 3548.0684692168816 3600.495665536025 3800.4542369247506 3750.370367431474 3722.987275809983 3210.2817058213395 1.1463373142257856 1.2040797087555375 1.098840822150031 1.3461107318162076 1.1894714664624333 1.1052202872984696 1.1215513140192943 1.1838382376329237 1.1682371552100144 1.1597073456385254 1.0 11.648484185672968 -11.125768317230667 0.38992793209633464 0.9141374311816142 1.186176951245526 0.027378209178524182 0.07977184160557949 1.9648933606614085 0.30193520146037583 0.2282561213456181 0.019413166058453325 7.485687324436364e-12 11.125768317230667 0.27203952006391185 VEVKEEEESSSNGTASQST(ph)SPSQPR ddPTM_A549_MK2206_60min_R1 2 VEVKEEEESSSNGTASQSTSPSQPR 25 1 Q92793;Q92793-2;I3L466 Q92793 CREBBP CREB-binding protein 1 VEVKEEEESSSNGTASQS(0.063)T(0.566)S(0.37)PSQPR;VEVKEEEESSSNGTASQS(0.158)T(0.739)S(0.103)PSQPR 210.0 6.7125999999999995e-81 31379000.0 2304.0 2839.4 2617.8999999999996 2778.6000000000004 4697.799999999999 3441.4 3019.6 3185.6 5258.1 5152.299999999999 4671.200000000001 True False 2692.8588726082153 2983.9133319420316 2989.1575850672803 3459.3571247360956 4006.7598431380284 3805.5666637835607 3568.2222336645036 3637.168555490842 4067.148745460302 3988.3918515722444 3511.2121214385324 0.7669314127068346 0.8498242853865325 0.8513178588147023 0.9852315966939668 1.1411329491242674 1.0838327427009542 1.0162365901729156 1.035872635914889 1.1583318252484285 1.1359017096176498 1.0 11.777753440465865 -6.3346123754720995 2.4577476495043857 1.073446660774405 0.8151972826683482 0.8214478414113936 0.0527121257122385 0.1106505016163569 1.2946135699822416 0.009269281546717119 0.02615903766181632 4.627938984707823e-07 6.3346123754720995 -0.25824937810605686 VEVKEEEESSSNGTASQST(ph)SPSQPR ddPTM_A549_PD325901_60min_R1 2 VEVKEEEESSSNGTASQSTSPSQPR 25 1 Q92793;Q92793-2;I3L466 Q92793 CREBBP CREB-binding protein 1 VEVKEEEESSSNGTASQS(0.024)T(0.804)S(0.172)PSQPR;VEVKEEEESSSNGTAS(0.013)QS(0.116)T(0.523)S(0.346)PS(0.003)QPR 192.07 5.2489e-58 30991000.0 4512.6 5000.1 5478.0 5576.2 6024.1 6040.299999999999 5457.5 5969.4 6566.4 6991.1 7058.299999999999 True False 4970.71582999946 5421.475974852477 5849.770021890023 5920.6292095309545 5600.98799801679 5991.109799455085 5665.18814895859 5850.335634096294 6290.437043271102 6549.680752891412 6190.17384625018 0.8030010066697189 0.8758196634714295 0.9450090041386537 0.9564560473721578 0.904819175863647 0.9678419295258271 0.9151904760139152 0.9451003767269396 1.0161971536682541 1.0580770291062198 1.0 12.595764211646234 -2.0774634990908747 0.22917439735040626 1.0136297212894032 2.981186498563545e-14 0.7275299951956704 0.034831907274911325 16.90816874215006 0.20594501930215472 0.019689355907850824 6.471215657318213 0.008366359090784347 2.0774634990908747 -1.0136297212893735 VEVT(ph)PTVPR ddPTM_A549_MK2206_60min_R1 2 VEVTPTVPR 9 0 Q8IXS8 Q8IXS8 FAM126B Protein FAM126B 1 VEVT(0.998)PT(0.002)VPR;VEVT(0.972)PT(0.028)VPR 139.38 4.4603e-05 19181100.0 3186.9 3346.6000000000004 2885.5 2421.3999999999996 3991.3999999999996 3282.4 3164.6 2579.1000000000004 4956.6 4254.1 4479.7 True False 3724.770807775662 3516.9276455156737 3294.707288938321 3014.6431087007745 3404.270347375607 3629.741389319223 3739.5668567541024 2944.695323162491 3833.9380140637386 3293.0958553992373 3367.266856569661 1.1061703649975048 1.0444457761504762 0.9784514947219662 0.8952789419760705 1.0109891767959378 1.0779488362312195 1.1105644476790044 0.8745060752809902 1.1385904881828968 0.9779729364111094 1.0 11.717362344227974 -7.145163136310897 6.420766010300198 1.0555215091044596 1.0006129786894162 0.0 0.083654104767383 0.5183250255986462 25.785013630374735 0.012819216652419694 0.022337502854560036 7.158744520311007e-08 7.145163136310897 -0.0549085304150434 VEVTEFEDIKS(ph)GYR ddPTM_A549_MK2206_60min_R1 2 VEVTEFEDIKSGYR 14 1 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 1 VEVTEFEDIKS(1)GYR;VEVTEFEDIKS(1)GYR 107.75 4.6406e-06 13001900.0 3143.8 3599.8999999999996 3314.8999999999996 3192.7999999999997 4624.0 4120.5 3961.2 3891.4 4973.5 5100.7 4789.0 True False 3674.3965814694902 3783.1195335838943 3785.0026657777294 3975.036143330239 3943.815725375759 4556.528575033465 4680.898765396686 4443.017866912692 3847.010191047492 3948.4483274100016 3599.759130323925 1.020734012594573 1.0509368534453774 1.0514599807229699 1.104250589947818 1.0955776713373804 1.2657870735432915 1.3003366602963444 1.2342542114791124 1.0686854458235149 1.0968645913413377 1.0 11.813684659796746 -9.065175805553558 3.333061476710249 1.0269484655859171 1.141565170632398 0.13375330761793236 0.09070501609714074 0.2612816890213174 6.053258769436204 0.01872994134104333 0.01856181973364816 8.606452862097253e-10 9.065175805553558 0.1146167050464808 VEVTEFEDIKS(ph)GYR ddPTM_A549_PD325901_60min_R1 2 VEVTEFEDIKSGYR 14 1 Q01105-2;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105 Q01105-2;Q01105 SET;SETSIP Protein SET;Protein SETSIP 1 VEVTEFEDIKS(1)GYR;VEVTEFEDIKS(1)GYR 119.4 7.322399999999999e-07 18868500.0 3227.8 3149.6000000000004 2922.2 3305.0 4127.4 3697.9 3635.1 3843.0 3235.6000000000004 3503.8 3521.4 True False 3555.483879819229 3415.027845522161 3120.518064616107 3509.142343800404 3837.505662757009 3667.785528434838 3773.4357197030445 3766.3483502248214 3099.6189841020937 3282.5694700377494 3088.2901239937887 1.1512791017254764 1.105798907618768 1.010435528829345 1.1362735374299509 1.242598819632377 1.1876427994697738 1.221852730216688 1.2195578132258393 1.003668327667886 1.062908385625609 1.0 11.592592575087382 -8.776620622614947 24.85772343661456 1.0017322400823225 1.1576973297816529 0.4712172962592259 0.06372994402028194 123.94900781494222 202952.916176996 0.01164895770652882 0.012424691106941627 1.6725510311432923e-09 8.776620622614947 0.15596508969933032 VEYAYSDNSLDPDDEDS(ph)DYHQEAYK ddPTM_A549_PD325901_60min_R1 2 VEYAYSDNSLDPDDEDSDYHQEAYK 25 0 K7EID0;Q9UH92-2 K7EID0 MLX Max-like protein X 1 VEYAYSDNSLDPDDEDS(0.997)DY(0.003)HQEAYK;VEYAYSDNSLDPDDEDS(1)DYHQEAYK 115.66 2.6709e-17 11736800.0 3589.9 3979.0 3843.0 3819.0 4319.4 3760.3999999999996 4109.8 3521.2 3867.0 4190.9 4647.8 True False 3954.3440052552974 4314.324294301715 4103.80908983632 4054.8909564217047 4016.020245121049 3729.7765491566443 4266.200687968855 3450.9669036720393 3704.4834378547393 3926.2858587765313 4076.150064831696 0.9701173760438018 1.058431172965133 1.0067855757429691 0.9947845128192382 0.985248379290685 0.9150243464627318 1.0466250310009149 0.8466241057821627 0.9088191992283035 0.9632338840151724 1.0 11.992991450445311 -6.814475430509717 1.7183506787888128 0.9513599946757374 1.015577590823563 0.22507720272611142 0.0522574827185904 0.45376893250327 2.712024249477614 0.008459721049002332 0.01998636372149583 1.5329379273315986e-07 6.814475430509717 0.06421759614782552 VEYFLK ddPTM_A549_PD325901_60min_R1 1 VEYFLK 6 0 Q13185;S4R2Y4;C9JMM0;B8ZZ43 Q13185 CBX3 Chromobox protein homolog 3 0 116.35 0.053632000000000006 2733500.0 2547.5 2409.7 2700.4 2957.7 3167.9 3147.6 3188.9 2899.2 2732.0 2946.7 3251.1 False True 2806.120324629619 2612.773875842885 2883.665382824355 3140.3904115759324 2945.397632661705 3121.966989183452 3310.255334533037 2841.373181621599 2617.1835407859166 2760.6448591130306 2851.235310420914 0.9841770387640735 0.9163655718956335 1.0113740427824085 1.101413973128837 1.0330250968401797 1.0949524151069001 1.1609898777678789 0.996541103162103 0.9179121523994995 0.9682276482138158 1.0 11.477371393446324 -8.517945187943262 24.819116695102306 0.9610252546864583 1.0436270037376392 0.24468333173771684 0.06328847734348114 225.46158762865545 1134226.854785298 0.011915586870013971 0.013697373953112836 3.0342741140195845e-09 8.517945187943262 0.0826017490511809 VFAS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 VFASPLR 7 0 Q9UK33 Q9UK33 ZNF580 Zinc finger protein 580 1 VFAS(1)PLR;VFAS(1)PLR 64.42 0.025789 6629100.0 2202.3 2062.23 2533.9 2390.0 2647.8 2758.6 2468.1000000000004 2813.2 2448.0 2645.1000000000004 2868.6000000000004 True False 2425.875874752428 2236.0213594968154 2705.865691578521 2537.6248719161777 2461.8276624141113 2736.134876210915 2562.0248960961417 2757.088519087293 2345.1190731493134 2478.08793458441 2515.780385553639 0.9642637682853918 0.8887983117829826 1.0755571937504596 1.008682986197037 0.9785542794397554 1.0875889214824224 1.0183817756144584 1.095917805432985 0.932163668424989 0.9850175908892246 1.0 11.296790272657763 -3.533561941022065 15.038823988521843 0.98949299705798 0.4966268044060752 0.0 0.06315319098771342 0.0 0.0 0.0085824221709314 0.0 0.00029271033650189076 3.533561941022065 -0.4928661926519048 VFCVEEEDS(ph)ESSLQK ddPTM_A549_MK2206_60min_R1 1 VFCVEEEDSESSLQK 15 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VFCVEEEDS(0.783)ES(0.082)S(0.135)LQK 126.63 4.5607e-08 1883900.0 1483.4 1695.6 1390.5 1398.6 1549.1 1481.4 1579.3 1439.7 1993.2 1867.6 1994.1 True False 1733.7616543520091 1781.8987975068342 1587.693808791799 1741.2570627855391 1321.229442080361 1638.1607647262663 1866.2383672096807 1643.7818838963356 1541.7433824863494 1445.7078628954685 1498.909935639787 1.1566816745476969 1.1887964414261207 1.0592322934427119 1.1616822474675972 0.8814601936149115 1.0929013983932545 1.2450637111916303 1.096651536434517 1.028576397973024 0.9645061577888534 1.0 10.54969798395223 -2.0000000005177703 0.06448039817486372 0.8616818180304744 1.585138649242495 0.22588924315451986 0.0896903870899553 277.19977255355855 1.291742104203116 2.706620167814835 18.455487097200525 0.0099999999880779 2.0000000005177703 0.7234568312120206 VFCVEEEDS(ph)ESSLQK ddPTM_A549_PD325901_60min_R1 2 VFCVEEEDSESSLQK 15 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VFCVEEEDS(0.988)ES(0.004)S(0.007)LQK;VFCVEEEDS(0.645)ES(0.14)S(0.215)LQK 136.17 1.1634000000000001e-09 6176700.0 4501.9 4401.4 4430.5 4627.0 5250.4 4276.6 4864.9 5273.8 4171.6 4691.4 4950.8 True False 4958.929573876386 4772.321424714642 4731.180372760815 4912.7992813205665 4881.630016896689 4241.772787502211 5050.036431675428 5168.609921783935 3996.28215912977 4395.184203360666 4341.882985706951 1.1421149741254406 1.0991363517682653 1.089660957776935 1.1314904840809885 1.1243117405435687 0.9769431376814407 1.163098233715567 1.1904074657927186 0.9204030077008375 1.0122760603703918 1.0 12.084105130326089 -8.770312182195987 24.999993199459993 0.9624125257325136 1.1112043669901692 0.5360818719544421 0.05625005920387145 95.82444977278381 269993.88992722775 0.009972792668700589 0.010694065049632155 1.697023349295233e-09 8.770312182195987 0.14879184125765565 VFDAIMNFK ddPTM_A549_MK2206_60min_R1 1 VFDAIMNFK 9 0 P13639 P13639 EEF2 Elongation factor 2 0 63.48 0.004070799999999999 2773600.0 2033.3 2658.2 2173.5 2003.7 2635.1 2295.2 2365.5 2196.3 3143.5 3098.5 2548.3 False True 2376.4713305877976 2793.4910259098074 2481.7349826745603 2494.6065899495125 2247.480280695863 2538.076540569545 2795.2807304720436 2507.6322508866574 2431.502269137992 2398.54669799829 1915.4867804979046 1.2406618279923949 1.4583713416094042 1.2956158235816524 1.3023355814030069 1.1733206950724353 1.325029525867992 1.4593056756807523 1.309135764557369 1.2693913076789578 1.2521865054974801 1.0 10.903495353871582 -10.275412078594906 0.6325211941957709 0.9896499268046567 1.3243662939357987 0.2081441270174449 0.10725360712533835 0.3634056878662838 0.2620038138482744 0.062092364107057596 0.017940020425806173 5.303809555382101e-11 10.275412078594906 0.33471636713114206 VFDDES(ph)DEKEDEEYADEK ddPTM_A549_MK2206_60min_R1 4 VFDDESDEKEDEEYADEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(1)DEKEDEEYADEK;VFDDES(1)DEKEDEEYADEK;VFDDES(1)DEKEDEEYADEK;VFDDES(1)DEKEDEEYADEK 302.66 1.5014999999999995e-152 956466000.0 93481.0 88381.9 75258.6 73784.5 107497.0 110100.1 99537.79999999999 116544.3 111519.70000000001 109762.70000000001 108343.3 True False 109258.30740897931 92880.16120038311 85931.40113508712 91861.70581231205 91684.33370041492 121750.81950346871 117622.52982184732 133064.81142694975 86260.66601036683 84967.22983649428 81438.66848703788 1.3416023301801565 1.1404921387579698 1.0551670690534967 1.1279863425926855 1.1258083586546823 1.495000124208159 1.4443081156289854 1.6339266579257603 1.0592101714444955 1.0433278369478503 1.0 16.313426353256144 -8.966510493702225 24.999986170443655 1.0261218619812988 1.2867116980422626 0.31893384452936036 0.17025302140328222 163.49171963055244 122047.74850949575 0.03220421340902574 0.034090633646163694 1.0801635209617723e-09 8.966510493702225 0.26058983606096375 VFDDES(ph)DEKEDEEYADEK ddPTM_A549_PD325901_60min_R1 2 VFDDESDEKEDEEYADEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(1)DEKEDEEYADEK;VFDDES(1)DEKEDEEYADEK 341.2 4.785999999999998e-197 1885480000.0 49518.0 49793.0 52882.0 51300.0 56838.0 42406.0 46067.0 41912.0 47956.0 49139.0 52529.0 True False 54545.03090677505 53989.230858548675 56470.89052529905 54468.68448924681 52845.89496045521 42060.65959566448 47820.10489382966 41076.03228067208 45940.576091482246 46036.35515388581 46068.26600876635 1.1840044271776073 1.1719397219829164 1.225808900959137 1.1823471818731344 1.1471214251997055 0.9130072225349384 1.0380270202644473 0.8916339997006986 0.9972282456374675 0.9993073137401248 1.0 15.491485676045228 -7.118637395513628 4.923212171591455 0.9878923338824211 1.1892622142426874 0.8576583265516557 0.042392018898040555 0.061853821784189814 2.2533843028715483 0.00593201594744958 0.010454541986415088 7.609613594855185e-08 7.118637395513628 0.20136988036026626 VFDDES(ph)DEKEDEEYADEKGLEAADK ddPTM_A549_MK2206_60min_R1 3 VFDDESDEKEDEEYADEKGLEAADK 25 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(1)DEKEDEEYADEKGLEAADK;VFDDES(1)DEKEDEEYADEKGLEAADK;VFDDES(1)DEKEDEEYADEKGLEAADK 258.89 4.574699999999999e-125 242325500.0 46447.0 46515.8 45294.6 40584.2 58325.0 35696.0 38712.6 36977.9 63039.6 73126.2 68665.8 True False 54286.11807987577 48883.255534954245 51718.0553697958 50527.33082189397 49745.4697626603 39473.327026912906 45746.178315989 42219.630565069325 48761.23125355535 56606.94063164836 51614.18678032926 1.05176738153249 0.9470895229445753 1.002012403874706 0.9789426894768106 0.9637945081722928 0.7647766920151617 0.8863101633410482 0.8179849998365119 0.944725361286498 1.096732200248903 1.0 15.655480041797624 VFDDES(ph)DEKEDEEYADEKGLEAADK ddPTM_A549_PD325901_60min_R1 3 VFDDESDEKEDEEYADEKGLEAADK 25 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(1)DEKEDEEYADEKGLEAADK;VFDDES(1)DEKEDEEYADEKGLEAADK;VFDDES(1)DEKEDEEYADEKGLEAADK 269.08 2.1965999999999993e-138 789019000.0 56945.7 55959.4 52632.3 55647.3 68538.4 54970.8 60411.0 60874.5 64072.0 60660.3 68880.8 True False 62726.7855427913 60675.29502753141 56204.244381730976 59084.507336812145 63724.49922864394 54523.136030310685 62709.973663167664 59660.31034237859 61379.276656381866 56830.19830564842 60408.89827136686 1.0383699643223439 1.0044098926447533 0.9303967791177407 0.9780762276344566 1.0548859696527297 0.9025679592000445 1.0380916629444885 0.9876079857370434 1.0160635007885082 0.9407587281323635 1.0 15.882473454703138 VFDDES(ph)DEKEDEEYADEKGLEAADKK ddPTM_A549_MK2206_60min_R1 1 VFDDESDEKEDEEYADEKGLEAADKK 26 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(1)DEKEDEEYADEKGLEAADKK 100.36 2.0272e-12 25181000.0 2366.5 2139.3 2728.5 2007.4 3339.4 2278.8 2268.6 1980.0 3285.1 3292.2 3047.9 True False 2765.907344629922 2248.181232310907 3115.4423281470167 2499.2130901156106 2848.178683676431 2519.9411034549853 2680.775254765958 2260.6710634956894 2541.0300952267257 2548.4897334677976 2291.0223122393613 1.2072808413316516 0.9813004527718548 1.3598480955437862 1.0908724357523838 1.2431911590125355 1.0999199309376726 1.1701218449267883 0.9867520937786044 1.1091249882865584 1.112381018662701 1.0 11.161775793763134 -9.365866153691151 0.29989339463475323 0.9829523279947202 1.1812466238988273 0.13448322474059893 0.1032559599193542 1.7080155129035215 0.4077433701327005 0.12603562517962116 0.0671806591024493 4.3065931601916607e-10 9.365866153691151 0.19829429590410708 VFDES(ph)LNFR ddPTM_A549_PD325901_60min_R1 1 VFDESLNFR 9 0 H0Y2V6;Q5SW79;Q5SW79-3;Q5SW79-2;H0Y4T4;E5RGW7;E5RG47;E7EWM2;E7EMW0 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 VFDES(1)LNFR 51.927 0.02502 443830.0 684.13 829.79 616.84 665.03 822.26 842.24 782.34 650.15 820.24 898.99 693.44 True False 753.5823739701129 899.719315448258 658.702471760249 706.1073927072867 764.5072942430044 835.3810766837817 812.112376812875 637.1822482171917 785.7681652614357 842.2276179774066 608.1512760783363 1.2391363853243704 1.4794334088223877 1.0831227322384194 1.1610719577218032 1.2571005345461574 1.3736402594938826 1.3353788913340476 1.0477364321687552 1.292060374070843 1.384898217115504 1.0 9.248286424795223 -11.079276261028117 0.5622574643415095 0.9218509080592645 1.2607536762437728 0.0 0.1652390708247043 1.4081740309872237 0.49761065233702995 0.26626696424642576 0.025356743669755936 8.331510365441038e-12 11.079276261028117 0.33890276818450826 VFDLQFST(ph)DSPR ddPTM_A549_PD325901_60min_R1 1 VFDLQFSTDSPR 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 VFDLQFS(0.151)T(0.762)DS(0.087)PR 80.96 0.00082091 4883500.0 1664.6 1924.2 1960.6 1589.5 1919.9 1708.4 1698.7 1916.1 1882.7 1842.4 2149.8 True False 1833.5889665862464 2086.3590869804866 2093.6581060455615 1687.6798049835832 1785.0528472954363 1694.487356818214 1763.3449580643082 1877.881882348628 1803.5766662656113 1726.070549574049 1885.3882287050183 0.9725259438188228 1.1065938861904878 1.1104652475122292 0.8951364919376676 0.9467826414305677 0.8987471816253331 0.9352688911585411 0.9960186733734167 0.9566075775833185 0.9154987409461037 1.0 10.880645910520805 -6.252324206200457 24.99625941402761 0.9644931322132269 1.0675349122192999 0.5032052393889206 0.04992098220982863 456.88392696613374 1252895.7646885903 0.006890320574332046 0.017948583307676905 5.593398914568752e-07 6.252324206200457 0.103041780006073 VFDLQFSTDS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VFDLQFSTDSPR 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 VFDLQFS(0.018)T(0.101)DS(0.881)PR;VFDLQFST(0.002)DS(0.998)PR 149.32 4.1951e-12 5929800.0 2412.23 2093.54 2152.7 1926.6799999999998 3306.8999999999996 3003.5 2592.0 2566.03 3376.4 3468.1 3321.6000000000004 True False 2819.3554506387654 2200.09224376767 2457.985229907303 2398.7166864919527 2820.459390623942 3321.328376438059 3062.9328486085537 2929.772610637296 2611.6507910028668 2684.6538012999426 2496.7550485036445 1.1292078701626984 0.8811806528983408 0.9844719174115311 0.9607336882845403 1.1296500200587558 1.3302579996498247 1.2267654572058364 1.1734321364016738 1.0460180275065756 1.0752571834825806 1.0 11.285838573031263 -4.929274491118068 20.78339122189831 1.0561136331491114 3.2875066120484058 0.0 0.1250079874636016 2029.4056547127473 619461.6210941134 0.01829054641273604 8118.854210702501 1.1768619155961093e-05 4.929274491118068 2.2313929788992946 VFDLQFSTDS(ph)PR ddPTM_A549_PD325901_60min_R1 1 VFDLQFSTDSPR 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 VFDLQFS(0.008)T(0.019)DS(0.972)PR 54.276 0.02094 4953400.0 729.54 919.41 975.02 999.8 872.63 766.93 1049.4 821.02 1175.3 1054.9 1026.8 True False 803.6023637410374 996.8919073696762 1041.1907204715615 1061.5553752894534 811.3394792100713 760.6843763548313 1089.3354912537147 804.6441120222702 1125.9062282158452 988.2934339696396 900.510109421487 0.8923857215298717 1.1070302231366482 1.1562232445568563 1.1788378211227706 0.9009776466932711 0.8447260818021426 1.209687131612031 0.8935425639354523 1.250298265878613 1.097481775751021 1.0 9.81459866216433 -8.763828381968782 24.999918526991564 1.118196389125913 1.0315904577567794 0.08484893367076385 0.13378691355015865 140.47328068928786 1469987.0550958994 0.025364292184920017 0.02763093691049139 1.7225491318460155e-09 8.763828381968782 -0.08660593136913364 VFDMLNR ddPTM_A549_PD325901_60min_R1 1 VFDMLNR 7 0 P60842;P60842-2;J3KT12;J3QS69;J3QL43;J3KTB5;Q14240-2;J3KSZ0;Q14240;E7EQG2;J3QR64;J3KS25;J3QLN6;J3QKZ9 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 77.741 0.047337 2171700.0 1286.9 967.98 1559.6 1208.7 1791.1 1549.0 1349.5 1347.6 1515.1 1515.5 1570.5 False True 1417.5451406342909 1049.5550717261053 1665.4438346366708 1283.3586538431302 1665.2993149595577 1536.3854575693135 1400.855960974735 1320.7210608282521 1451.425615902176 1419.811071363151 1377.3384562197562 1.0291915790436041 0.7620168209103191 1.209175440586803 0.9317670962048334 1.209070513815565 1.115474160059451 1.0170746011256557 0.9588936218720734 1.0537900901175443 1.030836730762579 1.0 10.42766740412824 -5.753348821327302 24.99999660031263 1.0420811338848999 0.8956042943060778 0.2567631732927367 0.10384989485302529 180.34314061742964 557250.6342457118 0.012852861574349292 0.04808719580268587 1.76461992487334e-06 5.753348821327302 -0.14647683957882207 VFGS(ph)LER ddPTM_A549_MK2206_60min_R1 2 VFGSLER 7 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 VFGS(1)LER;VFGS(1)LER 104.06 0.010203 268310000.0 10412.7 10499.9 9415.4 9242.599999999999 12676.7 11051.0 10161.2 10401.0 15703.3 12812.8 15225.6 True False 12170.1091939269 11034.30006130102 10750.645298308744 11507.037414916082 10811.974222722953 12220.4094849399 12007.358511296783 11875.373601726596 12146.527623017204 9918.37958112393 11444.663314817284 1.0633872626178866 0.964143702420239 0.939358808781207 1.0054500598561116 0.9447175443531662 1.067782349623013 1.049166601148588 1.0376341597005896 1.0613267764103838 0.8666379524055294 1.0 13.482387401098517 -7.263451224151063 24.99737218839024 1.0344673344891566 0.9811180396398421 0.0 0.061886514675616226 173.35665083578925 2153992.557480419 0.005652990388255775 0.009322225890350236 5.4519112296148575e-08 7.263451224151063 -0.0533492948493145 VFGS(ph)LER ddPTM_A549_PD325901_60min_R1 5 VFGSLER 7 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 VFGS(1)LER;VFGS(1)LER;VFGS(1)LER;VFGS(1)LER;VFGS(1)LER 111.74 0.008025399999999999 410620200.0 16483.66 15952.220000000001 16488.960000000003 16816.19 20756.170000000002 19347.15 19225.170000000002 18289.54 19945.27 18608.21 19582.08 True False 18157.069028570873 17296.56956372096 17607.999981771412 17854.887863961543 19298.328224099238 19189.59322492713 19956.79436476669 17924.74077683344 19107.039663444782 17433.284444903005 17173.608301032644 1.0572658180097827 1.007159896774921 1.0252941416343266 1.0396701468315155 1.1237200642883438 1.1173885469236693 1.1620618110619592 1.0437376038066288 1.112581545387633 1.0151206513691562 1.0 14.067905571544824 -6.540953078580389 24.93149858538308 1.0713661145018265 1.0284402959755783 0.18130756239789592 0.047765616090073924 412.56680511441755 569088.2772472042 0.008220950543178694 0.01711570942534379 2.8777093072697887e-07 6.540953078580389 -0.042925818526248216 VFIDQNLS(ph)PGK ddPTM_A549_MK2206_60min_R1 3 VFIDQNLSPGK 11 0 F5H452;Q5JSB6;Q5JSB5;Q14186 F5H452 TFDP1 Transcription factor Dp-1 1 VFIDQNLS(1)PGK;VFIDQNLS(1)PGK;VFIDQNLS(1)PGK 184.31 1.2760999999999999e-18 15394500.0 8612.0 10755.5 10072.599999999999 9782.0 13779.099999999999 11802.2 9707.3 11505.5 14861.8 13103.3 13447.7 True False 10065.495056815082 11302.909009545147 11501.046140551072 12178.590439130667 11752.212643063389 13051.100970333684 11470.990756673536 13136.439859115979 11495.626029417834 10143.255429362924 10108.264952361053 0.9957688193030614 1.1181848777029784 1.137786375283396 1.204815118769323 1.1626340127064387 1.2911316662000687 1.1348130278277069 1.2995741525401563 1.1372501694005088 1.0034615710180508 1.0 13.303247764580679 -10.101306576344948 0.9348700518485676 1.0129693298205433 1.1685347764487124 0.37571572012153565 0.0798361970573979 0.3980807855027657 0.6961371400546037 0.03293060132385777 0.015454333660839717 7.919420868431139e-11 10.101306576344948 0.15556544662816907 VFIDQNLS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 VFIDQNLSPGK 11 0 F5H452;Q5JSB6;Q5JSB5;Q14186 F5H452 TFDP1 Transcription factor Dp-1 1 VFIDQNLS(1)PGK;VFIDQNLS(1)PGK 164.13 1.0749e-13 26676000.0 11046.400000000001 10924.3 11174.599999999999 11447.2 13672.5 11795.8 11025.7 11450.5 12802.9 11412.5 12939.900000000001 True False 12167.822396070114 11844.92909983419 11932.975554328634 12154.267545522533 12712.190767564382 11699.73891568502 11445.289046994543 11222.110794756518 12264.838636284052 10691.912802330568 11348.374332784477 1.0722084097030817 1.0437555858212404 1.051514093948707 1.071013978663878 1.1201772513654187 1.0309616666314472 1.0085399645242656 0.9888738656017722 1.0807573205310992 0.9421536943351042 1.0 13.470198024201466 VFLAQK ddPTM_A549_MK2206_60min_R1 1 VFLAQK 6 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70;P30613-2;P30613 P14618 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR 0 116.12 0.053978 16406000.0 5891.1 6844.3 5479.1 5916.9 8630.7 6772.7 4904.2 6031.9 8813.0 9213.8 8734.1 False True 6885.373656433272 7192.64563563106 6256.118768609239 7366.540765619736 7361.135463019157 7489.38261864559 5795.229659006973 6886.940296919014 6816.869571469096 7132.396180737986 6565.181921102992 1.0487711900718335 1.0955744596370072 0.952923901240222 1.1220619404225298 1.12123861173712 1.1407730522397048 0.8827218695005083 1.049009818719839 1.0383367366496097 1.0863973407670169 1.0 12.680619273394377 VFLAQK ddPTM_A549_PD325901_60min_R1 1 VFLAQK 6 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BR70;P30613-2;P30613 P14618 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR 0 118.18 0.050907 34918000.0 11006.0 10632.0 10150.0 9895.3 13666.0 13477.0 12394.0 11761.0 12799.0 12842.0 13605.0 False True 12123.321017811031 11527.995953007241 10838.840036908321 10506.51020714316 12706.147305140588 13367.247780285112 12865.660452257027 11526.417628673991 12261.10253972144 12031.15392837057 11931.671249200745 1.0160622736419362 0.966167749030083 0.9084092086122781 0.8805564608434002 1.0649092687658255 1.12031646708172 1.0782781542961843 0.9660354687903507 1.0276098195835526 1.0083376986418804 1.0 13.542508512613315 -6.770989052382461 24.999793519583154 1.0259658634904838 0.9420117116388815 0.4342033216920449 0.051085871344607944 171.18414670201204 448138.36623639025 0.007944156559508165 0.015153129781857276 1.6943805115495532e-07 6.770989052382461 -0.08395415185160227 VFLENVIR ddPTM_A549_MK2206_60min_R1 4 VFLENVIR 8 0 P62805 P62805 HIST1H4A Histone H4 0 ;;; 127.56 0.0029448 174329620.0 2701.315 3369.0600000000004 3072.54 2644.6 3510.7299999999996 3232.0899999999997 3271.65 3077.03 4026.1099999999997 4271.63 3696.41 False True 3157.2309311890904 3540.5307635812537 3508.272373437722 3292.5271187206044 2994.3062676359104 3574.107618512294 3866.066456076456 3513.2084255091627 3114.2025133765396 3306.6658162241224 2778.489381273892 1.1363120379252813 1.2742646372677437 1.2626545910458857 1.1850061911019558 1.0776741807316428 1.2863492092503963 1.3914274721121762 1.2644311146866483 1.1208257747412116 1.1900948186125766 1.0 11.440085011323434 -9.225180063142398 1.4775730229392365 1.0359655691165264 1.2351792426961083 0.21183048542559868 0.09399029741235283 0.21522935695242437 0.9720706061836271 0.019444485045229495 0.017359421544023482 5.954152268169545e-10 9.225180063142398 0.19921367357958197 VFLENVIR ddPTM_A549_PD325901_60min_R1 2 VFLENVIR 8 0 P62805 P62805 HIST1H4A Histone H4 0 ; 127.56 0.0029448 332850000.0 4597.9 4660.5 4636.9 5093.8 5922.9 4739.1 4548.1 5226.1 5425.4 5300.200000000001 5253.9 False True 5064.675423204921 5053.256691026171 4951.587917944846 5408.432457140849 5506.895936895745 4700.506340843596 4721.180434315815 5121.861335703863 5197.3893053367165 4965.5444674622095 4607.703607216157 1.0991756100095276 1.0966974271331666 1.0746324720605138 1.1737804594615557 1.1951497766200405 1.0201407776060292 1.0246276316301988 1.1115865455587204 1.1279782183031584 1.07766143197354 1.0 12.169832202364178 -7.278129373475941 24.85395394051557 1.060601812910128 1.1257454282454968 0.32914141271878194 0.04797772167794057 927.4514532607465 1381114.9546238175 0.009135259455224738 0.01463154143227762 5.27072826498244e-08 7.278129373475941 0.06514361533536883 VFLQDGPARPAS(ph)PEAGNTLR ddPTM_A549_MK2206_60min_R1 2 VFLQDGPARPASPEAGNTLR 20 1 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 VFLQDGPARPAS(1)PEAGNTLR;VFLQDGPARPAS(1)PEAGNTLR 170.51 6.8219e-35 44657000.0 5123.9 4715.2 4332.0 4106.799999999999 5087.1 4658.9 3843.1 4613.9 6523.0 6299.0 6622.3 True False 5988.689052672407 4955.183539752432 4946.342739795808 5112.966184361255 4338.794328840624 5151.901705672467 4541.341524107843 5267.934454476144 5045.550915090536 4876.051525154507 4977.800143817946 1.2030794486817453 0.9954565062051351 0.9936804606225088 1.0271537700667182 0.871628872892593 1.0349756030423884 0.9123189748282376 1.0582856487355208 1.0136105848598063 0.9795595211290666 1.0 12.281292592660657 -5.261139032688618 24.99998515402285 0.9972427084514899 1.2030794671034806 0.5807544604451375 0.05190870062219385 12.189444186514795 1014131.4924399484 0.006350639192432177 0.05111753430750585 5.481014705884576e-06 5.261139032688618 0.2058367586519907 VFLQDGPARPAS(ph)PEAGNTLR ddPTM_A549_PD325901_60min_R1 4 VFLQDGPARPASPEAGNTLR 20 1 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 VFLQDGPARPAS(1)PEAGNTLR;VFLQDGPARPAS(0.992)PEAGNT(0.008)LR;VFLQDGPARPAS(0.997)PEAGNT(0.003)LR;VFLQDGPARPAS(0.903)PEAGNT(0.097)LR 110.68 1.2179e-10 79398400.0 9838.5 9307.3 10660.4 11067.5 12009.3 10122.0 9323.2 11226.3 10181.1 11027.8 10925.7 True False 10837.297277279096 10091.658834972186 11383.878850192848 11751.114338883805 11165.808197835862 10039.56978793841 9677.999477850803 11002.382639638017 9753.223772728956 10331.502825983878 9581.908163718683 1.131016608812206 1.0531992858357424 1.1880596907928234 1.2263856152763695 1.1653011077808615 1.0477630985812028 1.0100284110941455 1.1482454696547684 1.0178790702314335 1.0782302073300483 1.0 13.22609727091651 -7.347802094852074 4.218107725495729 1.021826895841472 1.1533183559470612 0.39470023822600164 0.05813059683792115 0.13991365385237703 4.546601278412496 0.0089349384192354 0.014594564951871225 4.489499268646286e-08 7.347802094852074 0.1314914601055892 VFLQGPAPVGT(ph)PSFNR ddPTM_A549_MK2206_60min_R1 2 VFLQGPAPVGTPSFNR 16 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 VFLQGPAPVGT(0.996)PS(0.004)FNR;VFLQGPAPVGT(0.983)PS(0.017)FNR 95.57 6.038200000000001e-06 7578800.0 3656.4 4749.3 4479.9 4136.7 5375.5 4544.5 3866.1 3490.2 6038.700000000001 6358.3 6198.5 True False 4273.510929602726 4991.019084099558 5115.217183751442 5150.191685703518 4584.7710708817895 5025.395973605042 4568.520326391022 3984.946538289221 4670.944091822357 4921.955613968864 4659.241380102914 0.9172117477863599 1.0712085245064757 1.0978648167050868 1.1053712966443818 0.9840166449544454 1.078586740550892 0.9805287929276828 0.855277976218781 1.0025117204207146 1.0563856242752006 1.0 12.185879358370263 -7.777772263102758 24.89879024054821 0.9865433860130863 1.0464200274044366 0.1720785364189813 0.06805127783826165 320.81773744247323 489071.6549046151 0.010151770422512146 0.014048360185168623 1.6681217188893302e-08 7.777772263102758 0.059876641391350294 VFLQGPAPVGT(ph)PSFNR ddPTM_A549_PD325901_60min_R1 2 VFLQGPAPVGTPSFNR 16 0 Q8IWZ3-6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;H0Y4P6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 VFLQGPAPVGT(0.876)PS(0.124)FNR;VFLQGPAPVGT(0.989)PS(0.011)FNR 137.17 1.6345e-10 12384400.0 8433.1 8034.799999999999 9111.1 10403.7 10616.0 12070.5 10403.2 10176.2 10842.8 11107.9 10869.8 True False 9289.222103879898 8711.920794133046 9729.434035495113 11046.312920482978 9870.368783211801 11972.201849961515 10799.099468849472 9973.22770792554 10387.114822852694 10406.545298313931 9532.883509339388 0.9744399052793654 0.9138809664041271 1.020618160912505 1.1587588277629617 1.0354022236337808 1.2558846269580783 1.1328261232049641 1.0461921304456039 1.0896089113725573 1.0916471693080707 1.0 13.218696951619773 -5.960952361868159 5.74074302952942 1.0715424532694737 0.9472803367311285 0.3855942908524149 0.07074513756353579 0.17701880556391844 14.956355742615251 0.010856806149922654 0.03423905822488043 1.0940763698597452e-06 5.960952361868159 -0.12426211653834518 VFPLS(ph)PASNLR ddPTM_A549_MK2206_60min_R1 2 VFPLSPASNLR 11 0 A0A2R8YH03;Q5VWN6;J3KPH3 A0A2R8YH03 FAM208B Protein FAM208B 1 VFPLS(0.91)PAS(0.09)NLR;VFPLS(0.935)PAS(0.065)NLR 76.332 0.00124 16224700.0 828.27 1228.07 759.31 936.75 1367.83 1173.99 773.28 790.7 1376.37 1098.8400000000001 1613.27 True False 968.0617267427112 1290.5735174889226 866.9915756589004 1166.2537920523052 1166.6240189534442 1298.2208425685083 913.7749665015515 902.7841464171931 1064.6243926112475 850.6112808224767 1212.6505350130885 0.7983023128194658 1.0642583994530568 0.7149558348642815 0.9617393951339143 0.9620446990037839 1.0705646887415063 0.7535352849959274 0.7444718163650084 0.8779317386766804 0.7014479903835574 1.0 10.243948135167205 -10.57496965359882 1.0671667857927152 0.9947809765998292 0.887076808313536 0.0 0.14664733422697435 0.8453017662065173 1.827413744777801 0.060532669092157675 0.02029323788990335 2.6609109849129968e-11 10.57496965359882 -0.10770416828629326 VFPLS(ph)PASNLR ddPTM_A549_PD325901_60min_R1 2 VFPLSPASNLR 11 0 A0A2R8YH03;Q5VWN6;J3KPH3 A0A2R8YH03 FAM208B Protein FAM208B 1 VFPLS(0.996)PAS(0.004)NLR;VFPLS(0.724)PAS(0.276)NLR 67.385 0.0046504 26293000.0 1578.49 1684.77 1637.0 1577.3400000000001 1749.23 1860.48 1839.25 1975.44 1822.1799999999998 1984.26 1996.37 True False 1738.7371427770784 1826.7514806008298 1748.0966640806798 1674.7687094009464 1626.3701193159 1845.3288677201786 1909.243665226219 1936.0382994973 1745.600111401642 1858.973484964069 1750.8291460321136 0.9930935561117205 1.0433636455851665 0.9984393211881203 0.9565574763228369 0.9289142364357631 1.053974268078772 1.0904797133136142 1.1057836819114668 0.9970133952577143 1.0617674998026174 1.0 10.773822590478893 -4.064371559422506 13.665439551899222 1.009346634646217 0.4864048765125216 0.0 0.053647059295975914 0.0 0.0 0.0070264976759732865 0.0 8.622405446408863e-05 4.064371559422506 -0.5229417581336954 VFS(ph)PIR ddPTM_A549_PD325901_60min_R1 1 VFSPIR 6 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 VFS(1)PIR 80.098 0.043056 9545500.0 2629.1 2912.3 2513.1 2771.2 2575.3 2940.3 2439.9 2812.1 2798.1 2929.0 3218.5 True False 2896.004296558875 3157.7297417177383 2683.654078497958 2942.370730148163 2394.4198123026913 2916.3551716533584 2532.751729664511 2756.0104594502263 2680.505587654859 2744.0624401337323 2822.6449037524876 1.0259895932034744 1.1187130685548796 0.950758657219067 1.0424161842803923 0.848289421428638 1.0331994533837006 0.8972973278705423 0.9763929057411097 0.9496432172857927 0.9721599895494165 1.0 11.462831929985985 -5.771164494254309 24.971386116226615 0.968937246720588 1.0723513363456576 0.3521563062288773 0.05660821028736777 131.7634555438123 338335.07123401907 0.006997092046400781 0.022145129054315836 1.6936961711631739e-06 5.771164494254309 0.1034140896250696 VFS(ph)PIRSEPR ddPTM_A549_PD325901_60min_R1 1 VFSPIRSEPR 10 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 VFS(0.996)PIRS(0.004)EPR 58.098 0.0033104999999999996 5395400.0 701.66 836.41 770.33 826.13 814.92 795.02 898.78 718.77 1047.5 973.58 1179.0 True False 772.8920066652086 906.89720608115 822.6092261705988 877.1581738226404 757.682830521379 788.5456207080413 932.9835647312876 704.4335684858434 1003.4772177793734 912.1079926477973 1033.9904742967792 0.7474846489188939 0.877084681750027 0.7955675091978565 0.8483232637314178 0.7327754455733084 0.7626236801111095 0.9023135008722525 0.6812766519584538 0.9704898088755044 0.8821241735985289 1.0 10.014007179456037 -8.866234988547042 8.04944478556233 0.9869231178179247 0.7988803830750766 0.48771899373437744 0.06919013967400614 0.09558366951073206 6.669198182014274 0.009820424656670105 0.010435354927012268 1.3607082297032452e-09 8.866234988547042 -0.18804273474284816 VFS(ph)PVIR ddPTM_A549_MK2206_60min_R1 2 VFSPVIR 7 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 VFS(1)PVIR;VFS(1)PVIR 98.62899999999999 0.01149 7293100.0 1652.17 1832.8899999999999 1687.41 1683.04 2567.8 1793.6100000000001 1494.6999999999998 1681.12 2037.9299999999998 2396.0 2504.0 True False 1931.0159043216659 1926.1762720938327 1926.710111394009 2095.384875554537 2190.080021544091 1983.4086196980397 1766.2676422898164 1919.423908214077 1576.3421089054814 1854.7419359057303 1882.1876931157053 1.0259422646235308 1.0233709842748522 1.0236546113021294 1.1132709470041815 1.1635821600335254 1.0537783383413675 0.9384120663152361 1.0197834760234419 0.837505268295566 0.9854181613712805 1.0 10.878194786493363 -7.749826807294097 4.256928857064519 0.9305513893817172 1.071093958932173 0.42494653392617665 0.06133429813582056 0.1487380720540766 6.238755621031853 0.011741104533670357 0.017125418513894184 1.7789887131838977e-08 7.749826807294097 0.14054256955045585 VFS(ph)PVIR ddPTM_A549_PD325901_60min_R1 3 VFSPVIR 7 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 VFS(1)PVIR;VFS(1)PVIR;VFS(1)PVIR 114.28 0.0074012 13026610.0 2583.05 2273.9 2568.88 2677.47 2976.7400000000002 2498.79 2440.0 3532.0 2853.8500000000004 2953.48 3234.8500000000004 True False 2845.279334459094 2465.5295332527426 2743.219644730348 2842.851240924437 2767.664051595509 2478.440682711185 2532.8555352192316 3461.551489199601 2733.912609030706 2766.9967687559515 2836.9839574036773 1.0029240126768317 0.8690671397060423 0.9669492975352812 1.0020681412404353 0.9755656334864834 0.873618152208157 0.8927986810109512 1.2201519434630532 0.9636686883251538 0.9753304249517942 1.0 11.470142277135622 VFSGLVSTGLK ddPTM_A549_MK2206_60min_R1 1 VFSGLVSTGLK 11 0 P13639 P13639 EEF2 Elongation factor 2 0 133.81 1.7303e-07 3914700.0 3022.0 4265.6 3361.0 3357.7 5238.6 4087.6 3287.0 4449.6 5606.9 5050.2 5479.6 False True 3532.0397191935863 4482.700820149302 3837.6403389782367 4180.336650732883 4468.008879531459 4520.147118870719 3884.2053523828404 5080.3444263284955 4336.946102379448 3909.356312483772 4118.864090733555 0.8575276196026519 1.0883342400722305 0.9317229834341941 1.014924639086205 1.0847672516273104 1.0974256540874834 0.9430282880955845 1.2334333725062787 1.0529471249455706 0.9491345736021918 1.0 12.008030807357791 -6.515768093107649 22.315453655924514 1.0444924342909117 0.9723113377152967 0.16000793235822952 0.09037590597407576 124.12133569928585 389526.3345601039 0.011621599395507734 0.02505041624413094 3.049522955527099e-07 6.515768093107649 -0.072181096575615 VFSGLVSTGLK ddPTM_A549_PD325901_60min_R1 2 VFSGLVSTGLK 11 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 185.61 3.0777999999999995e-18 16140200.0 12404.6 11367.3 12777.1 10287.8 11935.3 11713.8 11604.4 13507.199999999999 12460.900000000001 12065.9 13742.3 False True 13663.90586021613 12325.262264542818 13644.230840943963 10923.254040710981 11097.005702549719 11618.406696498012 12046.011792171334 13237.788299806583 11937.211706947011 11304.057014820617 12052.084219617158 1.1337380001025392 1.022666456684812 1.1321055007842769 0.9063373472723679 0.9207540787415956 0.9640163879361837 0.9994961512602161 1.09838166234015 0.9904686599780668 0.9379337887816135 1.0 13.556995039141052 -6.245948302676542 24.98888701877409 0.9906793027501626 1.0888196320446255 0.4517406120047832 0.056831596857564934 643.368522303783 1037825.4790282787 0.007574108375140488 0.019963100065800442 5.676121685129534e-07 6.245948302676542 0.09814032929446292 VFT(ph)LPK ddPTM_A549_MK2206_60min_R1 1 VFTLPK 6 0 J3QRV5;Q6P1M3;Q6P1M3-2;A0A087WW77;Q15334 J3QRV5;A0A087WW77 LLGL2;LLGL1 Lethal(2) giant larvae protein homolog 2;Lethal(2) giant larvae protein homolog 1 1 VFT(1)LPK 78.49600000000001 0.046625 2719300.0 1355.6 1681.0 1423.2 1217.1 2306.1 1553.9 1267.6 1500.4 2089.5 1936.6 1675.2 True False 1584.3921387620217 1766.5557198684771 1625.0311604980147 1515.2895546376947 1966.8757448721985 1718.3326666046598 1497.9065119198317 1713.0862947822895 1616.2315862458506 1499.120714972886 1259.2016068320402 1.2582513635351145 1.402917301156296 1.2905250054328838 1.2033732695512778 1.5620022514270442 1.3646207702416482 1.1895684565463165 1.3604543430437277 1.2835367882924194 1.1905327207645848 1.0 10.29829357160419 -10.435145034558632 0.5124736601577616 0.9564148867518433 1.340304230440647 0.34333328143182584 0.11176773480512284 0.6317559459011473 0.2603170158236445 0.1156715213043385 0.023909887092517394 3.6715966543153655e-11 10.435145034558632 0.3838893436888037 VFT(ph)LPK ddPTM_A549_PD325901_60min_R1 2 VFTLPK 6 0 J3QRV5;Q6P1M3;Q6P1M3-2;A0A087WW77;Q15334 J3QRV5;A0A087WW77 LLGL2;LLGL1 Lethal(2) giant larvae protein homolog 2;Lethal(2) giant larvae protein homolog 1 1 VFT(1)LPK;VFT(1)LPK 78.49600000000001 0.046625 9919700.0 3297.4 3478.2 3463.9 3922.1 3516.5 3797.1 3868.2 3849.5 4310.9 3534.6 4458.299999999999 True False 3632.149620582419 3771.3201207439593 3698.9810841228277 4164.359209264617 3269.513171266418 3766.1776765244936 4015.4064677602573 3772.7187026256706 4129.7278645585675 3311.4247527813886 3909.957363492225 0.9289486515879348 0.9645425180226416 0.9460412838924256 1.0650651201846277 0.8362017452656346 0.9632273005556989 1.026969374462398 0.9649002154990309 1.056207902193095 0.8469209367090771 1.0 11.93293716027305 -7.710034562997814 5.494719333729479 1.0216725167472553 0.9504217568012558 0.0 0.07531102335040298 0.19403563563923817 12.686100500740467 0.00813034425447022 0.012020596843159545 1.949689429025216e-08 7.710034562997814 -0.0712507599459995 VGDGDLS(ph)AEEIPENEVSLR ddPTM_A549_MK2206_60min_R1 2 VGDGDLSAEEIPENEVSLR 19 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR 174.49 2.7795e-34 74814000.0 3331.6 4011.1000000000004 2925.79 2743.3 3837.3 3231.9799999999996 2990.8 3867.1 4734.1 4700.3 4406.200000000001 True False 3893.8926302003156 4215.24785720669 3340.711016774513 3415.408623151416 3272.838253240572 3573.985978385307 3534.189646457742 4415.27326749706 3661.8339088042517 3638.498965499877 3312.0189350664637 1.1756854977407232 1.2727124874127875 1.00866301862114 1.0312165147941335 0.9881701516223049 1.079095877304695 1.0670801452971825 1.3331062877538944 1.1056198592447866 1.0985743248556825 1.0 11.693495205521184 -10.3138178846991 1.0811283673518537 1.0092256794761985 1.1138631320974646 0.03285299707993394 0.10554672990562611 0.7135204763270366 1.643989546544667 0.044394467195909726 0.019343696372980126 4.854920417626671e-11 10.3138178846991 0.10463745262126611 VGDGDLS(ph)AEEIPENEVSLR ddPTM_A549_PD325901_60min_R1 3 VGDGDLSAEEIPENEVSLR 19 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR 216.19 1.8915e-66 142312200.0 2483.7400000000002 2976.48 3021.4700000000003 2476.41 3523.2 3239.21 3561.1 3618.74 3080.3999999999996 3579.5800000000004 4113.820000000001 True False 2735.887456367251 3227.318415557467 3226.5251237751104 2629.3722213648266 3275.742586380163 3212.830947716654 3696.6196092086925 3546.5613918533872 2950.9415003795534 3353.564707905056 3607.846219653587 0.7583159840526522 0.8945277096281955 0.894307830028551 0.728792764791757 0.9079496150738622 0.8905121649073887 1.0246056467350289 0.9830134589810526 0.8179233040212265 0.9295198585894977 1.0 11.816922131328742 -6.9722867953869985 24.650385843002674 0.924461897163114 0.8283381165381862 0.3805787122569645 0.0708629544819315 221.18518018708477 196738.9795920342 0.012336254028384576 0.023312963983702473 1.0658920048292423e-07 6.9722867953869985 -0.09612378062492777 VGDGDLS(ph)AEEIPENEVSLRR ddPTM_A549_MK2206_60min_R1 6 VGDGDLSAEEIPENEVSLRR 20 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(0.988)AEEIPENEVS(0.012)LRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(0.999)AEEIPENEVS(0.001)LRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(1)AEEIPENEVSLRR 252.55 9.214099999999999e-98 175093000.0 7265.3099999999995 8505.26 7996.08 6904.5599999999995 10413.919999999998 6876.98 6799.42 6899.17 12125.499999999998 10619.449999999999 12549.48 True False 8491.516708224472 8938.141405097302 9130.04438015385 8596.177509957472 8882.046163236406 7604.697459030127 8034.786600881934 7877.148475321999 9379.093610444626 8220.508869471665 9433.097767971914 0.9001832608006691 0.9475298173464148 0.9678733969187706 0.9112783224980421 0.9415831767792667 0.8061718054964156 0.8517654325774455 0.8350542599131314 0.9942750346857797 0.8714537972226538 1.0 13.20351590504212 -8.81055650065503 13.71536571949413 0.9973115657875763 0.8970221136942436 0.05991662509851059 0.06012742541753302 0.9640896028050674 268.4840866888338 0.008756906891067966 0.009321791516014621 1.5468332516159148e-09 8.81055650065503 -0.10028945209333273 VGDGDLS(ph)AEEIPENEVSLRR ddPTM_A549_PD325901_60min_R1 6 VGDGDLSAEEIPENEVSLRR 20 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(0.817)AEEIPENEVS(0.183)LRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(0.91)AEEIPENEVS(0.09)LRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(1)AEEIPENEVSLRR 186.55 3.6187e-44 254845300.0 7168.66 8177.9800000000005 8175.68 8178.250000000001 8391.83 9530.32 8482.21 9714.97 9144.619999999999 8648.01 10282.57 True False 7896.417085911436 8867.167075223306 8730.530809157697 8683.40192834664 7802.41681104185 9452.70823368752 8805.005143193408 9521.197302103466 8760.303422672663 8101.973172721377 9017.87907658171 0.8756401609351173 0.983287422676826 0.9681357151738461 0.9629095549635762 0.8652163934315485 1.0482185615279545 0.9763942350989038 1.0558133704441446 0.9714372246820276 0.8984344438329379 1.0 13.13857244924103 -7.273653446968229 24.9994335333358 0.9949865848191273 0.9377722430916877 0.24821918830055467 0.05181386921721946 707.3275357752492 1447737.9880444363 0.0061723577426265955 0.009913140768092042 5.325330340034392e-08 7.273653446968229 -0.057214341727439555 VGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_A549_MK2206_60min_R1 3 VGDPPQPLPEEPMEVQGAERASPEPQR 27 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 VGDPPQPLPEEPMEVQGAERAS(1)PEPQR;VGDPPQPLPEEPMEVQGAERAS(1)PEPQR;VGDPPQPLPEEPMEVQGAERAS(1)PEPQR 104.9 5.7951e-13 76364000.0 2679.95 3168.06 2875.91 2866.1000000000004 3852.3999999999996 2744.63 2526.26 2527.74 3637.43 4526.9 4359.8 True False 3132.260041513189 3329.3007221216694 3283.7572827345716 3568.294628664119 3285.7170632434218 3035.0649248620552 2985.248741560897 2886.054885879088 2813.5579127821225 3504.2701459314044 3277.141335641315 0.9557903430796727 1.015916123577913 1.002018816528083 1.0888436790492673 1.002616831782273 0.9261318368705977 0.9109307276723552 0.8806623182500934 0.858540302239216 1.0693069925974499 1.0 11.678222179035528 -7.225949529302456 4.724824415964008 0.9248441750967012 1.0178004503450726 0.23063170532526678 0.061995855575510524 0.18108200254924023 10.030052798817993 0.008924024396768792 0.015427878906845814 5.943612271485034e-08 7.225949529302456 0.09295627524837136 VGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_A549_PD325901_60min_R1 2 VGDPPQPLPEEPMEVQGAERASPEPQR 27 1 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 VGDPPQPLPEEPMEVQGAERAS(1)PEPQR;VGDPPQPLPEEPMEVQGAERAS(1)PEPQR 176.18 3.4542999999999995e-49 46530000.0 4426.200000000001 5122.3 5463.5 4432.0 5376.1 4303.299999999999 4771.9 5901.9 5786.0 5058.3 5234.6 True False 4875.544565603777 5553.974197713417 5834.285964694438 4705.754574197698 4998.501282538149 4268.255351554567 4953.4972657838725 5784.181974549017 5542.834541357001 4738.918074745119 4590.777384863375 1.0620302743668928 1.209811265522453 1.2708710258813978 1.0250452548000746 1.0888136939549964 0.9297456604251337 1.0790105575836568 1.259956972346451 1.2073847361086885 1.0322691948361928 1.0 12.164522759504685 -11.031411918183199 1.3656693934421176 1.0009724387882106 1.134672545830931 0.14544292287574467 0.10018151511818386 0.6113575940019641 2.0558078231605785 0.07354254671717841 0.01706171132844446 9.302251600560633e-12 11.031411918183199 0.1337001070427204 VGDPPQPLPEEPMEVQGAERAS(ph)PEPQRENAS(ph)PAPGTTAEEAMSR ddPTM_A549_MK2206_60min_R1 1 VGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSR 44 2 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 2 VGDPPQPLPEEPMEVQGAERAS(0.982)PEPQRENAS(0.895)PAPGT(0.042)T(0.041)AEEAMS(0.039)R 51.693999999999996 0.0013875 19141000.0 506.64 472.35 201.33 270.6 342.65 239.37 511.0 333.01 589.88 368.8 621.2 True False 592.148445841244 496.3905974300269 229.8816213765214 336.89701214769553 292.2466389057103 264.69997451905357 603.8420855088624 380.21518730035325 456.27312184479626 285.4878238572759 466.9388957521873 1.2681497541286593 1.0630739952181454 0.49231628263952465 0.7215012825286089 0.6258776931292757 0.5668835407096489 1.2931929445203725 0.8142718260552451 0.9771580949789808 0.6114029618316253 1.0 8.867089959060685 -7.74633487491216 24.99993043611132 0.9937616696477575 0.7780081054596001 0.05753187062295295 0.25979366713409163 338.652247106913 560512.4028427057 0.03557040102861257 0.05264533161379713 1.793350280653982e-08 7.74633487491216 -0.2157535641881574 VGDPPQPLPEEPMEVQGAERAS(ph)PEPQRENASPAPGTTAEEAMSR ddPTM_A549_MK2206_60min_R1 1 VGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSR 44 2 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 VGDPPQPLPEEPMEVQGAERAS(0.973)PEPQRENAS(0.012)PAPGT(0.005)T(0.005)AEEAMS(0.005)R 53.003 0.0012366 10497000.0 709.29 524.53 417.88 312.97 809.52 499.11 529.11 486.92 748.99 818.21 941.73 True False 829.0008115244274 551.2263365512266 477.1416676144673 389.6476640497573 690.4406803646598 551.925488917596 625.2424380892257 555.9424011299603 579.3449608912562 633.3757927284755 707.8724505742224 1.17111608292136 0.7787085598600069 0.6740503423002442 0.5504489738704722 0.9753744192256358 0.7796962411376187 0.8832699133608497 0.7853708682672744 0.8184312871920564 0.8947597723497848 1.0 9.467345618583574 -10.61637026938422 0.6175977285572434 1.0206251528181136 0.8107690419161044 0.06660017376039618 0.15419425594818448 1.4523311356040067 0.8460840733495095 0.16560172209873358 0.031680636522665916 2.4189658132821896e-11 10.61637026938422 -0.20985611090200917 VGDPPQPLPEEPMEVQGAERAS(ph)PEPQRENASPAPGTTAEEAMSR ddPTM_A549_PD325901_60min_R1 2 VGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSR 44 2 A0A024RCR6;A0A0G2JK23;P46379-2;P46379;P46379-3;H0Y710;A0A0G2JL47;P46379-5 A0A024RCR6 BAT3;BAG6 Large proline-rich protein BAG6 1 VGDPPQPLPEEPMEVQGAERAS(0.976)PEPQRENAS(0.014)PAPGT(0.003)T(0.003)AEEAMS(0.003)R;VGDPPQPLPEEPMEVQGAERAS(0.902)PEPQRENAS(0.078)PAPGT(0.006)T(0.006)AEEAMS(0.008)R 71.653 4.5248e-06 24520700.0 1899.1100000000001 2361.3 1827.9299999999998 2171.88 2678.2 2467.2 2044.9700000000003 2618.5 1963.88 2625.77 2860.9 True False 2091.9062491491095 2560.29503798307 1951.9843220360412 2306.03209490264 2490.0924712884184 2447.107941197552 2122.792452400523 2566.2719633264887 1881.3449531766653 2459.978434083287 2509.027436739319 0.8337518428525869 1.0204332565252365 0.7779844466638437 0.9190940127380641 0.9924532648891604 0.9753213158871485 0.8460618729459813 1.022815424713555 0.7498303628044909 0.9804509899183187 1.0 11.292912531667175 VGDS(ph)TPVSEKPVSAAVDANASESP ddPTM_A549_MK2206_60min_R1 1 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDS(0.527)T(0.462)PVS(0.011)EKPVSAAVDANASESP 104.3 2.6903000000000002e-11 7626100.0 1674.1 1881.9 1587.0 1647.8 2493.3 2012.5 1544.5 1838.7 2333.3 2265.6 2596.0 True False 1956.6471521846402 1977.6806717551974 1812.060463540155 2051.5110739725537 2126.538872854539 2225.461414210617 1825.1156576681753 2099.3413557825866 1804.811275514449 1753.7993864724633 1951.3415540448773 1.002718948986027 1.0134979535774875 0.9286229055000593 1.051333668224324 1.0897830102815678 1.1404776419574139 0.9353132740318822 1.0758451545455612 0.9249079289954698 0.8987659709480718 1.0 10.930250607559884 -8.765307223858748 24.998802632936478 0.9645398571830238 1.0290602034944556 0.252374457936269 0.06449281455906199 128.49095784902357 830466.631897938 0.011111671751997964 0.012049884767161564 1.7166935529134766e-09 8.765307223858748 0.06452034631143178 VGDST(ph)PVSEKPVSAAVDANASESP ddPTM_A549_MK2206_60min_R1 1 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDS(0.131)T(0.866)PVS(0.003)EKPVSAAVDANASESP 145.52 3.6281e-28 7823500.0 2221.1 1920.9 1859.3 1803.1 2258.5 1936.3 1747.8 1742.1 2929.0 3204.0 2723.1 True False 2595.9673793186225 2018.6656051727296 2122.976698084569 2244.859580944234 1926.2776418168585 2141.1979807880834 2065.3526361103513 1989.0480099574952 2265.586176651876 2480.21417472536 2046.8791162633286 1.2682563218768286 0.9862163276441532 1.0371773697902393 1.0967230859447763 0.9410803141776962 1.046079352598476 1.009025212920608 0.9717466919045973 1.106849036003556 1.2117052516775413 1.0 10.999210187454729 -5.253840999738167 24.74437696024598 1.035769683110733 1.2682564506832412 0.4496488769339355 0.07220204221339963 421.193135327998 1371592.194524173 0.007375413838624771 0.10845954341668504 5.573897784626897e-06 5.253840999738167 0.2324867675725082 VGDSTPVSEKPVSAAVDANASES(ph)P ddPTM_A549_MK2206_60min_R1 1 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDSTPVSEKPVSAAVDANAS(0.001)ES(0.999)P 134.91 2.3627e-23 12794000.0 2511.4 2253.1 2548.5 2439.9 3650.4 3356.5 2267.9 2561.0 4176.1 3672.9 4185.4 True False 2935.2629221650504 2367.773166231804 2909.915621507298 3037.6756095312744 3113.4309956556385 3711.682602135621 2679.9480738269067 2924.029592733565 3230.2200178613516 2843.1893390601667 3146.0496688364524 0.9329995490028737 0.7526178590522733 0.9249426829880638 0.9655523368309504 0.9896318632525348 1.179791482283992 0.8518454429926624 0.9294289348632566 1.02675429757472 0.903733137853384 1.0 11.61932573240818 -6.1550524155269 2.4478725819548437 1.0043913691492876 0.842727291774117 0.22497718808557887 0.09004438075133137 0.22772327365212797 2.6271755506010774 0.01139338659114568 0.03716109413729793 6.997575363212228e-07 6.1550524155269 -0.16166407737517063 VGDSTPVSEKPVSAAVDANASES(ph)P ddPTM_A549_PD325901_60min_R1 2 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDSTPVSEKPVSAAVDANASES(1)P;VGDSTPVSEKPVSAAVDANAS(0.043)ES(0.957)P 139.93 2.6199e-24 39774000.0 6132.700000000001 6165.9 6168.2 7378.6 8330.4 6963.9 6232.799999999999 7989.9 7204.8 7838.2 7499.299999999999 True False 6755.287189344878 6685.522032227933 6586.811144399789 7834.3593639835535 7745.301442319857 6907.188307273684 6469.992614719025 7830.535176544701 6902.007311366901 7343.294714324421 6576.93364197951 1.0271180396631898 1.016510488954202 1.0015018400607287 1.1911872295590908 1.1776462807656813 1.0502140789723362 0.9837399868872179 1.1906057750930699 1.049426326474164 1.1165225489661856 1.0 12.683199398925602 -9.642862057578483 1.2454868867249738 1.0103825264851503 1.078185253739149 0.0 0.07949637298891375 0.6110795287921936 1.9373559124004542 0.020047111204207324 0.014383955188795134 2.2758201714642232e-10 9.642862057578483 0.06780272725399872 VGDTEKPEPERS(ph)PPNR ddPTM_A549_MK2206_60min_R1 9 VGDTEKPEPERSPPNR 16 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 VGDTEKPEPERS(1)PPNR;VGDT(0.028)EKPEPERS(0.972)PPNR;VGDTEKPEPERS(1)PPNR;VGDT(0.003)EKPEPERS(0.997)PPNR;VGDTEKPEPERS(1)PPNR;VGDT(0.024)EKPEPERS(0.976)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDT(0.006)EKPEPERS(0.994)PPNR 147.25 3.6133000000000006e-15 2011583300.0 30321.600000000002 35837.899999999994 31353.1 30231.3 42700.3 34026.7 31460.710000000003 33824.700000000004 46844.9 47633.80000000001 49939.8 True False 35439.14478805435 37661.896033952675 35799.441033031406 37637.969857134645 36419.14243474539 37627.38280890456 37176.71377297361 38619.4548087993 36234.604945933585 36873.291496889164 37538.36939163727 0.9440778958275533 1.0032906768279317 0.9536759750946118 1.0026532976022011 0.9701844545985734 1.002371264887364 0.9903657078204301 1.0287994772996951 0.9652684848374331 0.9822827175094005 1.0 15.196078362651331 -5.247192085693555 24.03987222968079 0.9871391477021979 0.9440778448243162 0.28690060127936523 0.02034728055072696 1506.780497671897 2542361.8996054605 0.002775322977180938 0.076589337500124 5.659889003704914e-06 5.247192085693555 -0.04306130287788168 VGDTEKPEPERS(ph)PPNR ddPTM_A549_PD325901_60min_R1 8 VGDTEKPEPERSPPNR 16 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDT(0.002)EKPEPERS(0.998)PPNR;VGDT(0.003)EKPEPERS(0.997)PPNR;VGDT(0.01)EKPEPERS(0.99)PPNR;VGDT(0.003)EKPEPERS(0.997)PPNR 164.4 2.8790999999999998e-21 1960270200.0 56663.200000000004 56176.13 59718.6 56218.439999999995 68906.40000000001 65771.1 61870.049999999996 65014.5 64487.600000000006 67360.5 67528.8 True False 62415.606350756876 60910.28962524534 63771.4633131146 59690.925357459106 64066.65217817503 65235.481967938664 64224.548609340396 63717.734794611424 61777.41043366984 63107.34653418516 59223.18570033277 1.0539049126228643 1.028487220080481 1.076798935399996 1.0078979145008018 1.0817832816753565 1.1015192985062963 1.084449406931845 1.07589171438735 1.0431287966551033 1.065585138454154 1.0 15.853874476793337 -9.762661704721843 0.9277487467925013 1.0063025555518306 1.062849899346449 0.005353101937061067 0.03131076819832847 0.3458348068757509 0.6173473858205442 0.00919883475379908 0.0054827033802216235 1.727182763468808e-10 9.762661704721843 0.056547343794618454 VGDTEKPEPERS(ph)PPNRK ddPTM_A549_MK2206_60min_R1 3 VGDTEKPEPERSPPNRK 17 3 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 VGDTEKPEPERS(1)PPNRK;VGDT(0.01)EKPEPERS(0.99)PPNRK;VGDTEKPEPERS(1)PPNRK 117.48 2.2383e-10 185821000.0 5752.700000000001 6897.1 6137.7 5826.200000000001 7670.0 6434.1 6086.000000000001 5563.1 8485.7 9520.9 8330.0 True False 6723.615119988408 7248.132930104025 7008.11815190322 7253.619261548059 6541.753160387559 7114.952191390079 7191.747421539992 6351.68646127923 6563.702498878399 7370.1220774477715 6261.431103695619 1.0738144377281416 1.157584074641664 1.1192518189279272 1.158460285104284 1.0447696464353793 1.136314058808488 1.1485788635916288 1.0144144934422963 1.048275129148091 1.1770667049419072 1.0 12.612276719813655 -8.268548660239844 24.982024459038417 1.0228048932671239 1.1204884403841855 0.08931650564673965 0.05784516942393352 252.95799464369452 888892.3398737306 0.005688998916586418 0.006950671407504284 5.388294691971414e-09 8.268548660239844 0.09768354711706162 VGDTEKPEPERS(ph)PPNRK ddPTM_A549_PD325901_60min_R1 4 VGDTEKPEPERSPPNRK 17 3 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 VGDTEKPEPERS(1)PPNRK;VGDTEKPEPERS(1)PPNRK;VGDTEKPEPERS(1)PPNRK;VGDTEKPEPERS(1)PPNRK 179.19 2.3553e-31 337581000.0 16714.899999999998 18076.7 17181.2 18160.699999999997 21169.2 21187.699999999997 18491.9 20506.4 19240.8 21361.5 20736.8 True False 18411.784343140975 19600.086949184162 18347.219550948685 19282.445193057778 19682.348421775365 21015.154395959547 19195.619373655954 20097.383765040406 18432.176087684365 20012.731244423616 18186.30506140582 1.012398300862865 1.077738819568061 1.00884811340179 1.060272833208882 1.0822620843166424 1.1555483274366154 1.0554985913214476 1.1050833963898579 1.0135195701077468 1.100428656445105 1.0 14.150564837818147 -8.87065016442671 7.058511067370055 1.0059606288709602 1.0703529004279204 0.0 0.04776877173505325 0.1748570846406218 10.357888995917447 0.006721764225301751 0.007136187253683922 1.3469449165635568e-09 8.87065016442671 0.06439227155696026 VGDTSLDPNDFDFT(ph)VTGRGSPSR ddPTM_A549_MK2206_60min_R1 1 VGDTSLDPNDFDFTVTGRGSPSR 23 1 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 VGDTSLDPNDFDFT(0.37)VT(0.284)GRGS(0.284)PS(0.062)R 45.957 0.007859699999999999 1544300.0 1044.3 1224.7 1189.2 1096.1 1570.7 1102.4 1275.5 993.53 2013.5 1692.4 1353.6 True False 1220.5523093163013 1287.0319988833571 1357.8464418663846 1364.6445492057987 1339.6521106937084 1219.055236286105 1507.241839660576 1134.3659200580155 1557.4454648987887 1310.0856645771532 1017.4637625405032 1.199602732060655 1.2649413632872482 1.3345403461603198 1.3412217706883443 1.3166583027475434 1.1981313548133137 1.4813715192147452 1.1148956472175673 1.5307134487129117 1.2875993355340765 1.0 9.990761697793333 -11.068814707357179 1.387761360529209 1.0002648020990792 1.3334696653576108 0.029521347314892643 0.14262726230986975 0.2828071974945872 0.9733153266221378 0.08711937846493514 0.019322316491221268 8.534641686100976e-12 11.068814707357179 0.3332048632585316 VGDTSLDPNDFDFT(ph)VTGRGSPSR ddPTM_A549_PD325901_60min_R1 1 VGDTSLDPNDFDFTVTGRGSPSR 23 1 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 VGDTSLDPNDFDFT(0.618)VT(0.213)GRGS(0.151)PS(0.018)R 42.056999999999995 0.028151999999999996 3248800.0 2354.8 2125.6 1836.6 2285.7 1805.8 2250.3 1752.5 2367.2 1729.8 2156.1 3138.7 True False 2593.8575624878617 2304.7317717938495 1961.242720372985 2426.882497798663 1678.9668376718043 2231.974302884588 1819.1923465047964 2319.984338967526 1657.1025215415373 2019.9634780376725 2752.6597978586087 0.9423095307693726 0.8372744694374443 0.7124900512219872 0.881649995283333 0.6099434586787412 0.8108427727323658 0.6608852819080696 0.842815498221874 0.6020004807098414 0.7338224213573626 1.0 11.426610602452229 -11.055984663974495 1.371994209089482 0.9995817697181301 0.7466897036861811 0.0 0.13168787839369936 0.3348200139310251 1.127265612824373 0.07740300006531807 0.01733205862115766 8.790535578648384e-12 11.055984663974495 -0.2528920660319489 VGDTSLDPNDFDFTVTGRGSPS(ph)RR ddPTM_A549_PD325901_60min_R1 1 VGDTSLDPNDFDFTVTGRGSPSRR 24 2 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 VGDTSLDPNDFDFT(0.049)VT(0.288)GRGS(0.288)PS(0.376)RR 92.822 4.2497999999999994e-08 4164900.0 1123.7 1328.9 1167.1 1470.7 1643.6 1343.7 1335.1 1162.7 982.84 1594.3 1517.5 True False 1237.7771967757812 1440.891066774956 1246.3064243424333 1561.541798797959 1528.159206112182 1332.7573527023155 1385.907961094752 1139.509036379496 941.5346527181665 1493.6356259150605 1330.857120225075 0.9300601679663764 1.0826790080450348 0.9364689908497897 1.173335420509957 1.1482518918738167 1.0014278260591334 1.0413649519794932 0.8562219182377607 0.7074648648676379 1.1223110304000599 1.0 10.37813997761932 -8.25417991781742 6.829579941304838 0.8574524193670819 1.049643948593204 0.11617533055546925 0.12378635004195157 0.12491927172335975 34.92034600801412 0.02007815607177882 0.025298575425013764 5.56954968008412e-09 8.25417991781742 0.19219152922612215 VGDVT(ph)PQVK ddPTM_A549_MK2206_60min_R1 2 VGDVTPQVK 9 0 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGDVT(1)PQVK;VGDVT(1)PQVK 120.77 0.00014325 109774000.0 11348.0 13488.8 12375.6 10773.5 16627.4 12742.9 11542.4 11427.4 18297.7 15847.5 18766.7 True False 13263.26496803734 14175.322304676918 14130.646170502547 13413.007983640791 14181.531486183596 14091.345219947574 13639.504672754398 13047.268944944773 14153.300165422681 12267.538743433242 14106.410455429112 0.9402296218406666 1.0048851442020308 1.0017180639362515 0.9508448677302275 1.0053253115661025 0.9989320291275277 0.9669011628330284 0.924917716393492 1.0033240001162396 0.8696428323983622 1.0 13.784063303205661 VGDVT(ph)PQVK ddPTM_A549_PD325901_60min_R1 4 VGDVTPQVK 9 0 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGDVT(1)PQVK;VGDVT(1)PQVK;VGDVT(1)PQVK;VGDVT(1)PQVK 95.618 0.00096923 203544000.0 44457.4 46252.7 45156.100000000006 46555.7 52740.7 49563.9 46735.4 48075.0 53269.4 48914.299999999996 57761.399999999994 True False 48970.68252019191 50150.57735286478 48220.66449168826 49431.339853333855 49036.37517753755 49160.26803125865 48513.9412215922 47116.10641089206 51030.67236732848 45825.842750233336 50657.11397968278 0.9667088918613238 0.990000681305667 0.951903112976951 0.9758025274230872 0.9680057019672447 0.9704514167738717 0.9576925610300234 0.9300985135037317 1.0073742532548444 0.9046279811481732 1.0 15.628477266197134 -8.79954343423984 24.999979927875053 1.0034823027282602 0.9648615207663342 0.0 0.03306118771184149 76.40207441050848 50126.89566645309 0.0024465011309966955 0.002604524906815652 1.5865602374882022e-09 8.79954343423984 -0.038620781961925976 VGDVYIPR ddPTM_A549_MK2206_60min_R1 1 VGDVYIPR 8 0 Q9BRL6-2;Q9BRL6;Q01130-2;Q01130;J3QL05;J3KP15 Q9BRL6-2;Q01130-2 SRSF8;SRSF2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 0 61.998999999999995 0.029275 1421600.0 1247.6 1488.7 1409.6 1098.3 1742.7 1561.3 1428.4 1377.3 1978.2 1864.1 2007.9 False True 1458.1643791085114 1564.4684712481867 1609.5024759963462 1367.3835493045613 1486.3511385407314 1726.5157296929378 1687.9217904909176 1572.536492804349 1530.1408585362715 1442.9985153263237 1509.2830147791642 0.9661305168281296 1.0365640214119134 1.0664020334395972 0.9059822020886087 0.9848061125621372 1.1439310671269687 1.118360025232174 1.0419096202672367 1.0138197034968681 0.956082127206249 1.0 10.559647644359837 -5.251255195381749 22.82954380462673 1.0219376700715084 0.9661304386599159 0.06270830133294147 0.0650021590404218 1067.281049177672 2392315.9665520163 0.008760687956928963 0.15568492835202125 5.6071839598801666e-06 5.251255195381749 -0.055807231411592495 VGDVYIPR ddPTM_A549_PD325901_60min_R1 2 VGDVYIPR 8 0 Q9BRL6-2;Q9BRL6;Q01130-2;Q01130;J3QL05;J3KP15 Q9BRL6-2;Q01130-2 SRSF8;SRSF2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 0 ; 85.212 0.008365000000000001 8895900.0 2855.9 3458.7 2757.7 3112.8 2900.2 3512.1000000000004 3106.1 3331.0 3635.8999999999996 3502.8 3589.1000000000004 False True 3145.8288655975407 3750.176787308706 2944.8541053972463 3305.070586318275 2696.4999571468406 3483.4986220330434 3224.304335223139 3264.5605918810506 3483.0957671828382 3281.632610208411 3147.663453179449 0.9994171589151136 1.191416059274272 0.9355682871441211 1.0500076121479345 0.8566671746380989 1.1066934803701356 1.0243484995088261 1.037137750093176 1.1065654950069614 1.0425614615481333 1.0 11.620065581420867 -8.525463988832826 24.893313143864354 1.051455697977903 1.0247926275141415 0.018401473782786115 0.0840681875084694 325.40841296798254 3133316.4424712327 0.014215169007245319 0.016163446049085983 2.9821948176200144e-09 8.525463988832826 -0.026663070463761596 VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK ddPTM_A549_MK2206_60min_R1 2 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK 32 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 VGEDEDGS(1)DEEVVHNEDIHFEPIVSLPEVEVK;VGEDEDGS(1)DEEVVHNEDIHFEPIVSLPEVEVK 138.78 2.3718e-30 480750000.0 2334.26 2567.0 2076.65 1918.98 3502.3999999999996 2584.0 2111.98 2864.2 3776.9 3088.9 3736.7 True False 2728.2260208222447 2697.649335456501 2371.150196352024 2389.1301861462866 2987.2015996012265 2857.437164879619 2495.699428088077 3270.2091212446207 2921.4381804699447 2391.115344665782 2808.774262326462 0.9713226361460957 0.960436504862474 0.8441939347550269 0.8505952999467493 1.0635249830034315 1.0173253163153275 0.8885368473936848 1.164283354880915 1.0401114178717106 0.8513020703505235 1.0 11.455724966189882 -6.765874305473225 24.999987170597944 1.0229454351563985 0.9060196806978609 0.20202760987139756 0.08745021747269725 87.39343428255674 492646.90641506267 0.00999359631767726 0.01935322793846628 1.7144534368412295e-07 6.765874305473225 -0.11692575445853759 VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK ddPTM_A549_PD325901_60min_R1 2 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK 32 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 VGEDEDGS(1)DEEVVHNEDIHFEPIVSLPEVEVK;VGEDEDGS(1)DEEVVHNEDIHFEPIVSLPEVEVK 243.63 5.176199999999999e-131 918980000.0 6239.4 6758.8 6471.0 7280.5 7728.4 8278.400000000001 7994.6 9107.8 7477.099999999999 8041.799999999999 7533.2 True False 6872.8192947964835 7328.387796010662 6910.1609732841125 7730.19994978482 7185.583845532598 8210.983455094773 8298.838877812981 8926.137784069117 7162.863489315661 7534.039375577827 6606.664156889313 1.040285858579572 1.1092417628598161 1.0459379815876244 1.170060981792741 1.0876266259182554 1.2428334875373532 1.2561314879550973 1.3510809043866863 1.084187620139031 1.1403696626112685 1.0 12.689706293293558 -9.109580181162727 3.5813831306078265 1.0328529684978265 1.1628981796106246 0.10610475566942301 0.09654526007999976 0.2145392231297713 5.719594701759357 0.018450426337337462 0.01805760759000359 7.769978531376752e-10 9.109580181162727 0.1300452111127981 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK ddPTM_A549_PD325901_60min_R1 2 VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK 32 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 0 ; 85.069 2.6547e-06 3334300.0 1034.14 1214.5 693.65 819.96 906.2 858.95 766.9200000000001 1084.8700000000001 855.55 1135.3899999999999 1008.27 False True 1139.1251315063685 1316.85017728812 740.7252602563009 870.6070669357277 842.5516382202837 851.9549959839654 796.1055602747272 1063.2314167859495 819.5942087552676 1063.7012816331303 884.2591819501391 1.288225392236414 1.4892128961374738 0.8376789015893626 0.9845609575867755 0.9528333495640114 0.9634675142474288 0.9003079374522314 1.2023979377190137 0.926871018684522 1.2029293032470987 1.0 9.788325484402254 -5.758776914833037 24.999999944586623 0.9701830921725014 1.3887192348838748 0.6139575349620275 0.11834097444709406 21.894847337956573 205575.59754570996 0.012011697058078382 0.04265290385825391 1.7427018216575004e-06 5.758776914833037 0.4185361427113734 VGEEEHVY(ph)SFPNK ddPTM_A549_MK2206_60min_R1 3 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VGEEEHVY(0.999)S(0.001)FPNK;VGEEEHVY(1)SFPNK;VGEEEHVY(0.889)S(0.111)FPNK 207.47 2.6817e-32 139011200.0 13432.0 16983.7 16052.7 14336.5 18382.3 14460.7 12630.900000000001 17266.9 26870.3 26023.6 30250.4 True False 15698.993219129141 17848.097786752085 18329.21424264086 17848.943143589942 15678.288020885553 15990.921675764206 14925.771032982171 19714.53595266349 20784.219953051866 20144.850685824847 22738.390811432648 0.6904179521461931 0.7849323171003918 0.8060910903785287 0.7849694946141774 0.6895073688768978 0.7032565236641162 0.6564128111245953 0.8670154416886532 0.9140585244318062 0.8859400321194324 1.0 14.472842538330518 -8.618923992677582 2.133572368591604 0.9633324432804394 0.7356759685065118 0.725828740453422 0.05458521198595227 0.10366189265281478 0.9342165080276034 0.010137119791381361 0.011505151390241324 2.4047836323657836e-09 8.618923992677582 -0.2276564747739276 VGEEEHVY(ph)SFPNK ddPTM_A549_PD325901_60min_R1 1 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VGEEEHVY(0.998)S(0.002)FPNK 154.67 1.0820999999999998e-18 140310000.0 8148.6 9189.2 8139.6 10524.0 11668.0 10742.0 8336.0 10422.0 8915.6 10547.0 11540.0 True False 8975.83987331773 9963.606133500201 8692.002203391023 11174.043578261866 10848.479932414779 10654.520713498749 8653.231041634224 10214.125034099172 8540.90833683416 9881.060620037722 10120.653158087227 0.8868834583215908 0.9844825208280622 0.8588380678222733 1.1040832447985724 1.071915000243434 1.052750306435007 0.8550071726071936 1.0092357552968065 0.8439088074082727 0.9763263759456028 1.0 13.30501478000912 -7.753870401132854 24.996347599484025 0.9270982509046162 0.9952807453380218 0.09424513179070293 0.08426095355453957 305.0687081116684 1007477.1191893639 0.014103151836209167 0.02069547972101892 1.7625019204066073e-08 7.753870401132854 0.06818249443340563 VGEEEHVYS(ph)FPNK ddPTM_A549_MK2206_60min_R1 4 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VGEEEHVY(0.072)S(0.928)FPNK;VGEEEHVYS(1)FPNK;VGEEEHVY(0.001)S(0.999)FPNK;VGEEEHVY(0.494)S(0.506)FPNK 155.02 2.5409e-18 9250900.0 4270.82 4687.3099999999995 4243.91 4036.58 5887.48 4526.82 3594.53 4517.79 6543.58 6123.07 8502.0 True False 4991.630004475963 4925.874057880256 4845.760253196408 5025.542281208963 5021.439491097593 5005.845087740081 4247.609572650042 5158.200567651609 5061.469577950046 4739.864234343195 6390.718756737108 0.7810748985337176 0.770785610411566 0.758249648850217 0.7863813872126709 0.7857393952447026 0.7832992310079221 0.6646528715056038 0.807139347544253 0.7920031800201245 0.741679365775003 1.0 12.64176248319992 -10.418307591499183 0.6096844093130421 1.0158611447004455 0.7640414492694811 0.0 0.08315087722336856 0.2516373276687952 0.1566950779128901 0.032865714190793094 0.007870262283499558 3.816738524450255e-11 10.418307591499183 -0.2518196954309644 VGEEEHVYS(ph)FPNK ddPTM_A549_PD325901_60min_R1 2 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VGEEEHVYS(1)FPNK;VGEEEHVY(0.017)S(0.983)FPNK 89.541 5.7673e-05 7666600.0 2142.2 2271.5 2143.3 1780.2199999999998 2485.1 2338.0 2125.1 2190.0 2215.7 2568.7 2546.2 True False 2359.6745669957095 2462.9272768299434 2288.757226709911 1890.1801462270357 2310.555149129582 2318.9601031614284 2205.971843399339 2146.318731978235 2122.5818343043034 2406.5118436229145 2233.0335416916528 1.056712549515991 1.1029513130215378 1.0249542534753169 0.8464629442131507 1.0347158275908395 1.0384797450936099 0.9878811948915854 0.9611672605474049 0.9505373719985971 1.0776872799679675 1.0 11.124789206251842 -5.999265536255009 23.44884996769242 0.9760250854451394 1.0758622426969888 0.26033697438561243 0.0581166607295281 8.467497435700869 270227.16412575875 0.006670641664234703 0.0204415410465703 1.001692596097022e-06 5.999265536255009 0.09983715725184938 VGEFSGANK ddPTM_A549_MK2206_60min_R1 3 VGEFSGANK 9 0 P10599;P10599-2 P10599 TXN Thioredoxin 0 ;; 122.13 0.00032504 44689100.0 21514.699999999997 23387.5 21569.899999999998 20056.3 28247.3 21553.399999999998 20600.9 21247.7 29755.7 30603.8 29727.3 False True 25145.855376086787 24577.823853910777 24628.836164155495 24970.094400361504 24092.15958897203 23834.16648201099 24343.816867631172 24259.626543352206 23016.081460088863 23690.380324737795 22345.19097825818 1.1253363374944367 1.0999155871088748 1.1021985083107724 1.1174706192780965 1.0781809657574037 1.0666351657142505 1.0894432225402617 1.0856755069561397 1.0300239314348871 1.0602003960399569 1.0 14.447676754656442 -8.647482338673822 0.447439762386352 0.9980490275028052 1.1128635792464918 0.5802388281717952 0.02301880817278879 0.20654436010948643 0.10219058784158211 0.006958426385153007 0.007222690525550667 2.251736985609544e-09 8.647482338673822 0.1148145517436866 VGEFSGANK ddPTM_A549_PD325901_60min_R1 2 VGEFSGANK 9 0 P10599;P10599-2 P10599 TXN Thioredoxin 0 ; 135.79 0.00012484 82496000.0 25450.0 24652.0 26171.0 24742.0 29024.0 25654.0 26937.0 26057.0 25414.0 26756.0 28661.0 False True 28033.66526470024 26729.510556201534 27947.12143900765 26270.257146841024 26985.454367364302 25445.0823295566 27962.102275491994 25537.27269367894 24345.93795956562 25066.621593792464 25135.878697048338 1.115284872376162 1.0634006822821092 1.1118418327778383 1.045129850579916 1.073583091826949 1.012301285991827 1.1124378269209079 1.0159689661725546 0.9685731799153106 0.9972446913795774 1.0 14.617460503025375 -8.47209420892974 5.3042355855785095 0.9853811894598792 1.07321038750042 0.629223850471422 0.03024056491951459 0.09234937380533512 5.880470897973649 0.004831647783044315 0.005789923477659325 3.3721415085580288e-09 8.47209420892974 0.08782919804054079 VGEQDSAPTQEKPTS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 VGEQDSAPTQEKPTSPGK 18 1 Q9BX66-7;Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-3;Q9BX66-5;Q9BX66-2;Q9BX66-11;Q9BX66;Q9BX66-12;S4R303 Q9BX66-7 SORBS1 Sorbin and SH3 domain-containing protein 1 1 VGEQDS(0.002)APT(0.008)QEKPT(0.448)S(0.543)PGK 58.577 0.00091743 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VGEQDSAPTQEKPTS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 VGEQDSAPTQEKPTSPGK 18 1 Q9BX66-7;Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-3;Q9BX66-5;Q9BX66-2;Q9BX66-11;Q9BX66;Q9BX66-12;S4R303 Q9BX66-7 SORBS1 Sorbin and SH3 domain-containing protein 1 1 VGEQDSAPTQEKPT(0.025)S(0.975)PGK;VGEQDSAPTQEKPT(0.21)S(0.79)PGK 107.47 1.1502e-09 19108700.0 5491.5 6642.5 6042.1 6138.1 6943.8 6700.4 7644.900000000001 7098.2 7248.2 6450.6 7851.7 True False 6048.993037371368 7202.286786855774 6452.153240098891 6517.236496363471 6456.091442809542 6645.8341639105365 7935.830852949799 6956.620832569822 6943.583360294465 6043.308015133717 6885.990676027163 0.8784492053453233 1.0459332760832456 0.9369970921629867 0.946448637964691 0.9375690073594974 0.9651238981556124 1.1524602960293777 1.0102570798982562 1.0083637470593454 0.8776236128481621 1.0 12.749448512090613 -7.548619203518415 24.999418856395742 1.0166639250268783 0.9534130888872043 0.14608547851329579 0.06935356196215874 242.5697116829381 235585.42474462077 0.00817220073190548 0.012121522186122082 2.8273579619397515e-08 7.548619203518415 -0.06325083613967397 VGEVIVTK ddPTM_A549_PD325901_60min_R1 2 VGEVIVTK 8 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 107.47 0.0050581 13357000.0 7228.2 6420.7 6787.3 6461.4 8274.5 6839.8 6620.6 6945.7 6939.299999999999 8087.7 8331.3 False True 7962.001542880395 6961.794922448607 7247.92699335052 6860.506003095891 7693.327665475326 6784.098936528466 6872.5505559313315 6807.162564703761 6647.665353065786 7577.041241744483 7306.602916462048 1.0896994997417624 0.9528087131659263 0.9919694660046013 0.9389460576321886 1.0529281190499586 0.928488794873968 0.9405945053408089 0.9316453408692802 0.9098161524678382 1.0370128674535095 1.0 12.83498508964882 -7.291194020305018 24.84942022460181 0.9510649276225897 0.9979322335844474 0.15872484560861233 0.05176557401663122 872.4702457583994 728636.9841902666 0.007349563873666987 0.011750058589364504 5.114532936236991e-08 7.291194020305018 0.04686730596185773 VGEVIVTKDDAMLLK ddPTM_A549_MK2206_60min_R1 2 VGEVIVTKDDAMLLK 15 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 63.681999999999995 0.0013046 7178900.0 4332.3 5411.2 5276.3 4580.7 7024.8 4854.4 5581.799999999999 4013.2 7913.8 7236.6 7304.799999999999 False True 5063.486325434275 5686.606966896072 6024.558679128496 5702.97170563544 5991.461225696287 5368.089385910074 6595.940808010504 4582.083389909544 6121.336935741761 5601.847033963025 5490.816557776198 0.9221736461516402 1.0356577946212009 1.0972063291017073 1.0386381780609268 1.0911785456046728 0.9776486483249353 1.2012677419844244 0.8344994486148533 1.1148318053118362 1.020221122854593 1.0 12.422804997873353 -5.272539185020626 4.533482662121278 1.0493244127369823 0.9149741615973541 0.12537978953276152 0.08848749116485724 0.25349096121080605 13.19951000924752 0.011063653587279919 0.10616443959256469 5.339010991895171e-06 5.272539185020626 -0.13435025113962817 VGEVIVTKDDAMLLK ddPTM_A549_PD325901_60min_R1 4 VGEVIVTKDDAMLLK 15 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;;; 166.35 1.8429e-20 19613300.0 12381.4 13436.000000000002 14176.400000000001 14906.499999999998 17205.8 17901.1 16226.1 18433.8 16312.900000000001 15296.4 16136.699999999999 False True 13638.35061329506 14568.29887364611 15138.495753618421 15827.240649882204 15997.32396478764 17755.31937669078 16843.593114762607 18066.123397963656 15627.325542637842 14330.582693500039 14151.988198969335 0.9637056236584707 1.029417115731279 1.0697080537928185 1.1183757665255032 1.1303941000991435 1.2546166041873796 1.1901927049366319 1.2765784668531155 1.1042494752628436 1.0126197458632498 1.0 13.788717129659402 -3.9250184355359075 12.403030693082735 1.0888932157970976 0.5685866929294775 0.0 0.09957911267824891 0.0 0.0 0.014499138717427723 0.0 0.00011884517773130537 3.9250184355359075 -0.5203065228676201 VGFQY(ph)EGTYK ddPTM_A549_MK2206_60min_R1 2 VGFQYEGTYK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VGFQY(1)EGTYK;VGFQY(0.99)EGT(0.009)Y(0.001)K 110.76 0.00018878 15836200.0 6973.799999999999 7580.700000000001 6325.5 6449.9 10114.599999999999 7383.9 7175.299999999999 6848.7 10381.3 11176.8 10644.0 True False 8150.806946959706 7966.525250212352 7222.551015830659 8030.125789547016 8626.7557387296 8165.259396963865 8478.959131412403 7819.524198264103 8029.952125529573 8651.953117375275 8000.801040544555 1.018748860977168 0.9957159551701751 0.9027284867140095 1.003665226625916 1.078236503446715 1.0205552363551984 1.0597637772074011 0.9773426633955999 1.003643520797142 1.081385860432095 1.0 12.965928734582965 -6.497803016134246 24.98963341249854 1.0113489154816306 0.971140797768109 0.18114037561486673 0.043383265290740956 997.0367699908279 993612.9009000693 0.005337978939797932 0.012359051734648376 3.1783153389690877e-07 6.497803016134246 -0.04020811771352162 VGFQY(ph)EGTYK ddPTM_A549_PD325901_60min_R1 2 VGFQYEGTYK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VGFQY(1)EGTYK;VGFQY(0.999)EGT(0.001)YK 150.81 2.7883e-08 28347000.0 13326.4 13952.2 14731.8 14589.9 16594.8 15218.9 15073.400000000001 14365.400000000001 16318.599999999999 16254.099999999999 16675.800000000003 True False 14679.286317622827 15128.00085925016 15731.588537509935 15491.08498693298 15429.238496952083 15094.962324210212 15647.026485480965 14078.870827561708 15632.785991460129 15227.813352057943 14624.782316605793 1.0037268247716171 1.0344086176293361 1.0756801842887884 1.0592352522979804 1.0550063695261205 1.0321495388735153 1.0698980775744238 0.9626721630978242 1.0689243540883198 1.0412335050462553 1.0 13.836127530529899 -11.064789150628666 1.3345454263566883 0.9996718260065814 1.0438673170828403 0.0 0.03391204424583725 0.5767941777887761 1.8100379649207563 0.023207502165283583 0.004973375791814051 8.614118649508851e-12 11.064789150628666 0.044195491076258864 VGFQYEGT(ph)YK ddPTM_A549_MK2206_60min_R1 2 VGFQYEGTYK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VGFQYEGT(1)YK;VGFQYEGT(1)YK 119.45 6.2028e-05 10622900.0 5661.3 5727.7 5437.1 4986.6 7251.4 6523.1 5189.4 5787.1 8740.2 8601.2 7849.6 True False 6616.78903450386 6019.215465015272 6208.162537059973 6208.317223856983 6184.728665871491 7213.370112316662 6132.246807318375 6607.439147250458 6760.558655231387 6658.182946207165 5900.327682061118 1.1214273835368522 1.0201493526055527 1.0521725015264443 1.0521987181715775 1.0482008795333593 1.2225372048823004 1.0393061432778328 1.1198427448935055 1.1457937625711274 1.1284429111369811 1.0 12.526579363230985 -4.8744981689201135 17.3822391118771 1.0752021652952095 8.14334592195396 0.017363772973214897 0.06272699984029241 478.5433414058932 66235.97736537205 0.00925295779092052 88.03962603733244 1.3350632184670779e-05 4.8744981689201135 7.068143756658751 VGFQYEGT(ph)YK ddPTM_A549_PD325901_60min_R1 2 VGFQYEGTYK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VGFQYEGT(1)YK;VGFQYEGT(1)YK 122.51 3.7935e-05 16126600.0 7839.6 7841.200000000001 8465.400000000001 8475.3 9948.0 8719.3 8479.8 8881.2 8951.5 8882.6 10144.5 True False 8635.47042079151 8502.005442693799 9039.912950585584 8998.800032197147 9249.286798736908 8648.292911674698 8802.503429324606 8704.057498833383 8575.299584679775 8321.751120086003 8896.790811283869 0.9706275671716452 0.9556260929402363 1.0160869399244716 1.0114658446036406 1.0396205772317324 0.9720688161742548 0.9894020907134653 0.9783367602387548 0.9638643603717933 0.9353654926371272 1.0 13.119069315620349 VGFQYEGTY(ph)K ddPTM_A549_PD325901_60min_R1 2 VGFQYEGTYK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VGFQYEGT(0.025)Y(0.975)K;VGFQYEGT(0.011)Y(0.989)K 111.06 0.00018037 11691800.0 9430.3 8872.5 8654.6 9487.4 11356.0 10288.6 9321.099999999999 11299.900000000001 11908.2 11578.6 12450.7 True False 10387.657113780058 9620.216713041456 9241.95320033761 10073.415150551271 10558.39373607321 10204.81305277446 9675.819561201632 11074.514629899944 11407.739765880988 10847.525219983761 10919.342831490165 0.9513079014080605 0.8810252468031159 0.8463836462469929 0.9225294329527476 0.9669440642182222 0.9345629320607939 0.8861173891617038 1.014210726854576 1.0447276857158785 0.9934228998379564 1.0 13.414598411422638 -8.274679439361707 20.574291678931523 1.0211933150574517 0.9122329789436291 0.6624225485168286 0.03429796426681906 32.42438787124523 50385.45601937584 0.0059978762293758855 0.007286564171334961 5.312764443267013e-09 8.274679439361707 -0.10896033611382261 VGGALK ddPTM_A549_PD325901_60min_R1 1 VGGALK 6 0 O60566;O60566-3;O60566-2;H0YMK5 O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 0 78.002 0.023921 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VGGPLAVLGPSRS(ph)SEDLAGPLPSSVSSSSTTSSKPK ddPTM_A549_PD325901_60min_R1 2 VGGPLAVLGPSRSSEDLAGPLPSSVSSSSTTSSKPK 36 2 Q9NRF2-2;Q9NRF2-3;Q9NRF2 Q9NRF2-2 SH2B1 SH2B adapter protein 1 1 VGGPLAVLGPS(0.151)RS(0.658)S(0.191)EDLAGPLPSSVSSSSTTSSKPK;VGGPLAVLGPS(0.152)RS(0.828)S(0.02)EDLAGPLPSSVSSSSTTSSKPK 246.97 2.5152999999999994e-133 97169000.0 9285.7 9784.400000000001 9180.2 9856.0 11734.3 11644.7 11158.5 12069.8 11312.400000000001 11475.3 11768.6 True False 10228.377428228952 10608.965726354789 9803.22357702716 10464.782735399936 10910.123249137361 11549.869423987977 11583.142823665497 11829.05837042507 10836.979167930678 10750.747599613052 10321.136807302015 0.9910126780794692 1.027887327183682 0.9498201370697421 1.013917645970577 1.0570660434825987 1.1190501239957071 1.1222739355097624 1.1461003367435483 1.0499792193689086 1.0416243675800418 1.0 13.33331426270716 -6.601074008153117 4.675154541885513 1.050267882521005 0.9916861692411715 0.32949848086450706 0.04753151103021377 0.2937758916532394 11.87139762195108 0.008518443205246744 0.018249759133039414 2.5056822231646867e-07 6.601074008153117 -0.058581713279833525 VGGS(ph)DEEASGIPSR ddPTM_A549_MK2206_60min_R1 4 VGGSDEEASGIPSR 14 0 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog 1 VGGS(1)DEEASGIPSR;VGGS(0.996)DEEAS(0.004)GIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR 298.17 5.6031999999999994e-117 1070241700.0 30206.34 30315.9 29244.1 27388.4 38539.6 27858.62 26164.6 28760.8 42130.7 41275.2 44378.3 True False 35304.431717890824 31858.84982032168 33391.35312023606 34098.559229512 32870.475893099414 30806.60067734468 30918.369139931874 32837.73147625597 32588.163718903124 31951.10365312861 33357.94333122871 1.058351570638945 0.9550603735961257 1.0010015542228012 1.022202085150434 0.9853867658060039 0.9235161883767715 0.9268667685212783 0.9844051580216658 0.9769236488987936 0.957825946757843 1.0 15.02574272236967 -5.248407669491222 24.05584338115215 0.9816143891148368 1.058351654838519 0.36933945993899064 0.030224893150998723 1142.5738550287172 2109069.274142176 0.004289029469646601 0.10584753874539995 5.6440692085497735e-06 5.248407669491222 0.07673726572368222 VGGS(ph)DEEASGIPSR ddPTM_A549_PD325901_60min_R1 6 VGGSDEEASGIPSR 14 0 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog 1 VGGS(0.98)DEEAS(0.02)GIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(0.963)DEEAS(0.036)GIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR 299.66 3.358299999999999e-117 1396543300.0 34525.259999999995 34587.299999999996 34941.799999999996 35732.1 39479.79 37422.1 36116.719999999994 39948.700000000004 38114.85 38203.479999999996 38281.100000000006 True False 38030.23897904691 37502.093155139904 37313.16067011259 37939.19066351298 36706.865748281605 37117.346824857705 37491.16154342749 39151.891839351105 36513.015402461264 35791.305752953325 33572.767383886705 1.1327704548210575 1.117039078915463 1.111411527189775 1.1300584854891034 1.0933523986437625 1.1055790069505032 1.1167134694240735 1.1661800587264697 1.0875783632893408 1.066081486333814 1.0 15.035003842008079 -9.992676345084027 0.7096608480722848 1.0035591931027572 1.1200402285778375 0.5687044996358297 0.0268392343319125 0.19582533041752867 0.19838329730373522 0.011127933674685805 0.004653606903489659 1.0170063273556917e-10 9.992676345084027 0.11648103547508026 VGGS(ph)SVDLHR ddPTM_A549_MK2206_60min_R1 5 VGGSSVDLHR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VGGS(0.832)S(0.168)VDLHR;VGGS(0.775)S(0.225)VDLHR;VGGS(0.835)S(0.165)VDLHR;VGGS(0.5)S(0.5)VDLHR;VGGS(0.804)S(0.196)VDLHR 145.14 1.2688999999999999e-08 776550800.0 2925.4 3743.19 2987.07 3449.8600000000006 3901.8 3129.58 2721.72 3442.45 5759.45 5644.03 5845.73 True False 3419.136000836838 3933.7023825428237 3410.6814422349644 4295.075854870102 3327.850388683207 3460.750078352928 3216.2212934856784 3930.427829560979 4454.943770951742 4369.039703050926 4394.073907059615 0.7781243723150809 0.895228998361373 0.7762002902944554 0.9774700985273689 0.757349662083883 0.7875948724469135 0.7319451974438635 0.894483778082628 1.0138527173596996 0.9943027348792499 1.0 12.101343420343095 -8.602925356008468 3.888201277369453 1.0063726598582017 0.8188923411816548 0.6091858174271954 0.06569862659024363 0.10110125643351091 3.001975047273267 0.010752772154702068 0.012263194945823806 2.495023520119917e-09 8.602925356008468 -0.1874803186765469 VGGS(ph)SVDLHR ddPTM_A549_PD325901_60min_R1 5 VGGSSVDLHR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VGGS(0.912)S(0.088)VDLHR;VGGS(0.834)S(0.166)VDLHR;VGGS(0.5)S(0.5)VDLHR;VGGS(0.5)S(0.5)VDLHR;VGGS(0.554)S(0.446)VDLHR 134.75 2.2309000000000002e-07 1199550100.0 12759.64 12636.569999999998 14525.32 16609.879999999997 16991.329999999998 17095.54 15286.38 17408.84 18497.17 17296.13 19222.32 True False 14054.9892596495 13701.49810194627 15511.09556304484 17635.83456382554 15797.917597706306 16956.31959024823 15868.111555928097 17061.60702922922 17719.798270541374 16204.049400023992 16858.09650032609 0.8337233838575803 0.8127547556559093 0.9200976849755728 1.0461343938495316 0.9371115889270608 1.005826463854934 0.94127540174071 1.0120719755578096 1.0511150099418767 0.9612027905825876 1.0 14.041154025878479 -5.980763529045079 3.1462159196114294 1.0113971228500713 0.8233247362387843 0.7332619134285618 0.03880277459752167 0.0812814073062434 1.649740539453839 0.0055222121056421655 0.019049533545627547 1.0452892185241764e-06 5.980763529045079 -0.188072386611287 VGGSS(ph)VDLHR ddPTM_A549_MK2206_60min_R1 3 VGGSSVDLHR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VGGS(0.207)S(0.793)VDLHR;VGGS(0.125)S(0.875)VDLHR;VGGS(0.44)S(0.56)VDLHR 118.77 1.955e-05 47956000.0 2049.2 2584.2 2413.5 2129.7200000000003 3142.7 2588.0 2449.0 2410.6 4108.6 4057.0 4467.6 True False 2395.0548618701187 2715.724741989363 2755.770591527513 2651.5014956067657 2680.4129931095176 2861.860442224636 2893.9515996305377 2752.309932152884 3178.0086600860022 3140.520882291132 3358.1716205126713 0.7132020434097053 0.808691469310544 0.8206163659696482 0.7895670011057914 0.7981762982977968 0.8522079171724205 0.8617640569509476 0.8195858470546856 0.9463508775649874 0.9351877262936573 1.0 11.713460246246052 -8.554537892354372 0.46829664323377707 1.0025889596782276 0.7733967774281463 0.7632138809093884 0.03818265803913017 0.20985942431620608 0.1102300199713203 0.013382761579443113 0.015045820045042076 2.789087296824046e-09 8.554537892354372 -0.2291921822500813 VGGSS(ph)VDLHR ddPTM_A549_PD325901_60min_R1 5 VGGSSVDLHR 10 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VGGS(0.054)S(0.946)VDLHR;VGGS(0.232)S(0.768)VDLHR;VGGS(0.043)S(0.957)VDLHR;VGGS(0.495)S(0.505)VDLHR;VGGS(0.39)S(0.61)VDLHR 134.38 2.3634e-07 174129300.0 14049.160000000002 14387.8 14327.79 16003.810000000001 18993.04 17997.45 16240.53 19002.989999999998 18351.12 18204.85 20144.9 True False 15475.420380755053 15600.310399988486 15300.159989400452 16992.328996410382 17659.034392830923 17850.884734235526 16858.572256309024 18623.960456892735 17579.88624413883 17055.392664140854 17667.205009042584 0.8759404995206819 0.8830095304833899 0.8660204022973295 0.9618006350021534 0.9995375263824992 1.0103966487680949 0.954229729472224 1.0541543185444702 0.9950575790081645 0.9653701678002499 1.0 14.108786199940523 -6.409723157428809 3.010187496058 0.9995457736395349 0.8750901295093982 0.823224548468273 0.0246094144607279 0.06371322844907876 1.0982995793701915 0.0029448842807191663 0.007475074929122084 3.8929322227425233e-07 6.409723157428809 -0.12445564413013666 VGGTSDVEVNEK ddPTM_A549_MK2206_60min_R1 2 VGGTSDVEVNEK 12 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 187.42 6.2442e-19 22127000.0 15019.900000000001 15530.7 13640.1 11971.5 18065.3 14767.9 13792.3 13897.5 19433.6 20465.7 21950.0 False True 17554.891918701447 16321.146293016876 15574.471284646535 14904.518037421063 15407.918300958194 16330.629375861357 16298.18237957706 15867.513184308753 15031.920629082242 15842.484155954047 16499.20921081859 1.0639838367035581 0.9892077907779389 0.9439525910389874 0.9033474178658283 0.9338579870152303 0.9897825506178385 0.987815971743075 0.961713557393064 0.9110691571342557 0.9601965738798 1.0 14.010109258870829 -5.343071977844827 2.7611129689956146 0.9557312479857052 1.0746153044186404 0.5370736052614449 0.029599431379675484 0.2715414485606876 3.063123753715807 0.005264802769357405 0.06618800981469072 4.538663888194073e-06 5.343071977844827 0.1188840564329352 VGGTSDVEVNEK ddPTM_A549_PD325901_60min_R1 2 VGGTSDVEVNEK 12 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 149.94 1.0119e-11 31869000.0 21591.0 21580.0 21214.9 22901.3 24336.0 20495.1 21616.2 21867.8 21826.4 24794.0 27126.0 False True 23782.902425545875 23398.622335016596 22654.67068955725 24315.861288374024 22626.723314642295 20328.19470072876 22438.816319838523 21431.629574042767 20909.11231135056 23228.502608629482 23789.67396588162 0.9997153580017341 0.9835621273571947 0.9522900869531817 1.022118307432336 0.9511153178094333 0.8544965656058506 0.9432166389509813 0.9008794994323721 0.8789154631264696 0.976411137115332 1.0 14.53804787951641 -6.989309146710858 23.459481737959578 0.9313192904038341 0.9863839989008514 0.3329636204377199 0.041660269037180425 134.30223357426607 294701.03859190736 0.00755970618060182 0.014273393754595555 1.0249220894563592e-07 6.989309146710858 0.05506470849701728 VGGVS(ph)PEEHPAPEVSTPFPPLPPEPEGGGEEK ddPTM_A549_MK2206_60min_R1 1 VGGVSPEEHPAPEVSTPFPPLPPEPEGGGEEK 32 0 Q8TE77;Q8TE77-3 Q8TE77 SSH3 Protein phosphatase Slingshot homolog 3 1 VGGVS(0.997)PEEHPAPEVS(0.001)T(0.001)PFPPLPPEPEGGGEEK 57.832 0.00089872 21411000.0 571.26 754.57 879.46 377.42 729.55 761.62 667.98 845.38 1243.3 1287.5 1266.9 True False 667.6747220339272 792.9743899709441 1004.1806523409098 469.8879169430274 622.2341614290411 842.2141228775605 789.3433195268294 965.2152038676692 961.6945351421227 996.6528557924161 952.2937653387734 0.7011226433855792 0.8326993400916026 1.0544862193691649 0.49342748429720873 0.6534056864350936 0.8844057931828918 0.8288863670613498 1.0135687526257184 1.009871712013157 1.046581309327235 1.0 9.895262877195842 -8.018016655650161 1.7387937882703948 1.0065202206599493 0.7624762403073742 0.43494738966876 0.13265655516951103 0.2617725933982061 1.5815703009695923 0.02235875489290768 0.031462473046291205 9.593638381981767e-09 8.018016655650161 -0.24404398035257513 VGGYAT(ph)SPSSPKKEATSGR ddPTM_A549_PD325901_60min_R1 1 VGGYATSPSSPKKEATSGR 19 2 K7ESL7;C9JRL6;O95834-2;O95834-3 K7ESL7 EML2 1 VGGY(0.003)AT(0.252)S(0.232)PS(0.252)S(0.252)PKKEAT(0.004)S(0.004)GR 41.553999999999995 0.029213999999999997 6676000.0 1198.3 1067.3 1452.6 1380.6 1246.3 1767.3 1368.3 1487.1 1299.9 1560.5 1230.3 True False 1319.9505338581637 1157.2451166896756 1551.1821711934 1465.8765264299057 1158.76418750159 1752.9076947464466 1420.3714052624894 1457.4386238926177 1245.2697235240164 1461.9697636834046 1078.9808995142726 1.223330769295702 1.0725353129148398 1.4376363584301628 1.3585750471484739 1.0739431884505404 1.6245956675744282 1.3164008796651556 1.350754795148567 1.1541165595096285 1.354954257616185 1.0 10.075453610637284 -9.221248153353812 1.3095805239127383 1.0431787076091574 1.3078392570008084 0.0 0.17743481793226717 0.2978283913827134 1.0589551680532219 0.03404709912897035 0.02996717279348751 6.008303284088355e-10 9.221248153353812 0.26466054939165096 VGHFDPVT(ph)RSPLTQEQLIPNLAMK ddPTM_A549_PD325901_60min_R1 2 VGHFDPVTRSPLTQEQLIPNLAMK 24 1 Q9UNE7;H3BTA3;Q9UNE7-2 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 VGHFDPVT(0.491)RS(0.491)PLT(0.019)QEQLIPNLAMK;VGHFDPVT(0.488)RS(0.488)PLT(0.024)QEQLIPNLAMK 72.425 3.7434e-05 11209500.0 3056.5 2654.45 2974.15 2987.2 4300.6 3434.3 3430.2 3299.8 3336.7 3297.0 4301.9 True False 3366.793629923624 2878.149817293085 3175.993704016835 3171.712559576572 3998.540692264571 3406.332199438534 3560.738138077462 3233.9829003569794 3196.470102686813 3088.826857330461 3772.7935719909374 0.8923874486318467 0.7628696779649832 0.8418148630222656 0.8406801217864752 1.0598355345888975 0.902867367228094 0.9437935233224085 0.8571852232695513 0.8472422468107649 0.8187108036500547 1.0 11.881417450059985 -10.867977148859822 1.0516830657125644 1.0017831089082212 0.8814617189048007 0.0 0.08860555225688838 0.6120884459513467 1.1727252623317437 0.05566969973327054 0.01269696271112465 1.3552607198146145e-11 10.867977148859822 -0.12032139000342046 VGIDT(ph)PDIDIHGPEGK ddPTM_A549_MK2206_60min_R1 2 VGIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK 177.6 1.6285999999999999e-28 61895000.0 4395.2 5688.2 4910.4 5022.2 6818.3 5831.4 5049.9 5267.9 6903.4 7103.0 8277.1 True False 5137.002307676923 5977.705083733411 5606.768557131425 6252.639225455125 5815.337102147396 6448.474877429961 5967.401463035627 6014.640957267145 5339.7909224645155 5498.427366752255 6221.667633661344 0.825663248207601 0.9607882380910204 0.9011681252140334 1.0049780209450943 0.9346910578579349 1.0364544133700606 0.9591321514427981 0.9667248897587981 0.858257180691303 0.88375459611566 1.0 12.603085611698312 -5.2569197564708965 23.7483861000113 0.9459935728857436 0.8256631471378129 0.32440411855178053 0.05144171359821221 250.01527545013607 1313604.0437567579 0.008091920343140031 0.08755314245489344 5.534523598078845e-06 5.2569197564708965 -0.12033042574793074 VGIDT(ph)PDIDIHGPEGK ddPTM_A549_PD325901_60min_R1 2 VGIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK 219.24 6.1846e-47 132459000.0 13842.900000000001 15791.9 16678.3 17282.6 18195.2 18230.3 16842.3 16295.8 14249.2 15316.9 13983.599999999999 True False 15248.221017395623 17122.738834677875 17810.189732765317 18350.10695036758 16917.23192203235 18081.8384810367 17483.242942960198 15970.767485192198 13650.355676927778 14349.788320001497 12263.705849343887 1.2433616073897766 1.3962124536437694 1.4522681766472871 1.4962937937189122 1.3794551279895082 1.4744188015569604 1.425608470860018 1.3022790730133698 1.113069397180468 1.1701021286945834 1.0 13.582107378366038 -8.736262581656016 1.6642079159034473 1.0412267686800296 1.4173064584854655 0.7625946760255496 0.07582360452297186 0.08849904832666447 0.48007657576373686 0.013272848346583365 0.014391579794542371 1.8354282773828429e-09 8.736262581656016 0.37607968980543593 VGILHLGS(ph)R ddPTM_A549_PD325901_60min_R1 2 VGILHLGSR 9 0 Q9HD64-4;Q9HD64 Q9HD64-4 XAGE1A X antigen family member 1 1 VGILHLGS(1)R;VGILHLGS(1)R 57.348 0.0042029 2536800.0 150.84 128.17 82.068 0.0 222.332 170.57 223.23399999999998 270.66700000000003 253.96300000000002 174.61 0.0 True False 166.15316575746104 138.97133571265408 87.63762799497452 0.0 206.71616732376106 169.1809344723032 231.72929202833197 265.2683343508463 243.28981829012235 163.58509480087096 0.0 0.0 VGINYQPPTVVPGGDLAK ddPTM_A549_MK2206_60min_R1 2 VGINYQPPTVVPGGDLAK 18 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q9NY65;C9J2C0;Q9NY65-2;V9GZ17;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA8;TUBA1A;TUBA1B;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ; 157.52 3.542e-22 12385600.0 2864.2 3570.8999999999996 2535.1000000000004 2832.0 3676.9 3047.3 2637.4 3075.3 4592.5 4144.4 4961.0 False True 3347.6069370331797 3752.64355745291 2894.615300013009 3525.840127133309 3136.032880759979 3369.763263365971 3116.581440941437 3511.233192711258 3552.3060827155145 3208.177161589193 3729.046783365422 0.8977111662868447 1.0063278299947185 0.7762346433746405 0.9455070778037488 0.8409743998786052 0.9036527185440131 0.8357582036363614 0.9415900085711476 0.9526043219842898 0.8603209742232973 1.0 11.864591181453424 -8.860761463878168 1.289706273433571 0.9841525514214183 0.8886628659088864 0.0 0.06890139426931977 0.3169902753393097 1.0507647769828607 0.011374392430335917 0.011633501082595771 1.3779661085797822e-09 8.860761463878168 -0.0954896855125319 VGINYQPPTVVPGGDLAK ddPTM_A549_PD325901_60min_R1 3 VGINYQPPTVVPGGDLAK 18 0 Q9BQE3;F5H5D3;A0A1W2PQM2;Q9NY65;C9J2C0;Q9NY65-2;V9GZ17;Q71U36-2;Q71U36;P68363;P0DPH8;P0DPH7;P0DPH7-2;P68363-2;Q6PEY2;P68366-2;P68366 Q9BQE3;Q71U36-2;P68366-2 TUBA1C;TUBA8;TUBA1A;TUBA1B;TUBA3E;TUBA4A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-4A chain 0 ;; 232.53 3.0891e-64 28290000.0 8423.1 8023.6 8240.1 9156.9 9989.1 10111.8 10453.9 9877.900000000001 9324.9 9610.3 10245.8 False True 9278.206911241516 8699.77693082665 8799.32273774662 9722.50091617123 9287.500076524213 10029.452853356604 10851.728885093575 9680.877535437357 8933.006881213249 9003.504017895943 8985.631553477475 1.0325603554989757 0.9681875869325849 0.9792659186366535 1.0820052945981948 1.0335945805534297 1.116165602124557 1.2076757009799621 1.0773730792123142 0.9941434642683674 1.001989004814197 1.0 13.133404191519134 -4.329914344345598 16.271492532099494 1.0271960952230468 1.0376485740461507 0.0 0.07027657213872172 0.0 0.0 0.010213691520364141 0.0 4.6782740152180614e-05 4.329914344345598 0.010452478823103961 VGKPS(ph)PK ddPTM_A549_MK2206_60min_R1 1 VGKPSPK 7 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 VGKPS(1)PK 50.123000000000005 0.014765 55945000.0 2889.9 2954.4 2932.9 2679.1 4160.7 3024.2 2801.7 2622.6 4050.2 4218.0 4526.0 True False 3377.644468728506 3104.7663407373175 3348.829321686781 3335.4796202693683 3548.66654164596 3344.21883669851 3310.7326242077875 2994.3615813756546 3132.836166840363 3265.1508704717758 3402.069288754666 0.9928205988905356 0.9126111425772351 0.9843507105384753 0.9804267159680122 1.0430906135203837 0.9829955103362013 0.9731526148368622 0.8801589054265695 0.9208619522229495 0.9597543710425105 1.0 11.732196808827638 -8.013764703820375 24.68596947276564 0.9540310346019039 0.9818963892026631 0.17240469274160897 0.03974588646721716 1240.9296891555052 2225514.017395169 0.007509893278588723 0.00991830003151302 9.68802601151064e-09 8.013764703820375 0.02786535460075923 VGKPS(ph)PK ddPTM_A549_PD325901_60min_R1 4 VGKPSPK 7 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 VGKPS(1)PK;VGKPS(1)PK;VGKPS(1)PK;VGKPS(1)PK 64.09100000000001 0.010401 193703800.0 10009.2 10066.5 10326.5 9290.9 12844.199999999999 11715.2 10704.9 11050.800000000001 11920.6 12164.599999999999 12033.599999999999 True False 11025.326615616406 10914.839283384828 11027.318388289043 9864.777791835155 11942.0677020845 11619.795295362188 11112.280827446051 10830.383124815111 11419.618637003148 11396.525079976378 10553.543487275427 1.044703765034921 1.034234548476066 1.044892495263307 0.9347360726498425 1.1315694786763553 1.1010325877154301 1.0529431030292624 1.0262319132785565 1.0820648676695142 1.0798766398904167 1.0 13.365439863144008 -4.8060764049305 15.321581853016495 1.042794435645123 2.8435531349440613 0.0 0.050590070120633 4338.356366364254 345751.46195642406 0.006896158907908288 2395.950940290834 1.5628726640565942e-05 4.8060764049305 1.8007586992989382 VGLPARPKS(ph)PLDPK ddPTM_A549_MK2206_60min_R1 2 VGLPARPKSPLDPK 14 2 Q8IYH5;Q8IYH5-4;Q8IYH5-3 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 1 VGLPARPKS(1)PLDPK;VGLPARPKS(1)PLDPK 71.697 0.00036274 24817000.0 5262.700000000001 5675.700000000001 5902.1 5333.7 7311.1 5771.6 5534.6 5939.2 7452.7 7415.5 7737.9 True False 6150.915099338215 5964.5688871252305 6739.106529212572 6640.456739438894 6235.6468749556025 6382.346881121988 6540.165178977199 6781.099788037168 5764.6753495163675 5740.333399711581 5816.365874824284 1.0575186003965127 1.025480345544016 1.1586455656756918 1.1416848393567582 1.072086421169986 1.0973083568809712 1.1244418456008463 1.1658654104599342 0.9911129171684926 0.9869278383188024 1.0 12.50590230859503 -8.781241339018294 24.982130209419495 0.9958033029406271 1.104958049482137 0.6040394340755711 0.040614813638708135 117.27960842822756 147959.13482557403 0.007202708701706059 0.007672804439348929 1.6548501017061328e-09 8.781241339018294 0.1091547465415098 VGLPARPKS(ph)PLDPK ddPTM_A549_PD325901_60min_R1 2 VGLPARPKSPLDPK 14 2 Q8IYH5;Q8IYH5-4;Q8IYH5-3 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 1 VGLPARPKS(1)PLDPK;VGLPARPKS(1)PLDPK 89.866 1.4592e-05 51574000.0 9988.9 9014.9 10731.7 10129.9 12261.5 9939.0 9558.3 11059.2 11735.2 10125.8 10825.3 True False 11002.96577456048 9774.6172607943 11460.017696954574 10755.600916327896 11400.294539878634 9858.060079264946 9922.046337002457 10838.615580225438 11242.010354257289 9486.455259920165 9493.85672723064 1.158956374705061 1.029572863971959 1.2070982348074113 1.1329011196765033 1.2008075187378673 1.0383620021344626 1.0451017560169902 1.1416451597734467 1.1841352442166657 0.9992203940376257 1.0 13.212778562734309 -7.2678811300055255 24.935641776368577 1.0870105858435768 1.1420878085169763 0.2137800735569666 0.0690994346709352 951.2330203161556 3682164.9980600057 0.012111056561946687 0.01964129450919297 5.3965831124908366e-08 7.2678811300055255 0.05507722267339954 VGLQVVAVK ddPTM_A549_MK2206_60min_R1 1 VGLQVVAVK 9 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 151.27 5.8283000000000004e-05 5140500.0 2805.1 3251.5 3410.5 3309.7 4808.6 3031.8 3184.9 3389.8 4615.3 4468.0 4352.4 False True 3278.5323018894574 3416.987461720614 3894.160183304157 4120.57664857808 4101.2613099139035 3352.623063654037 3763.555103986648 3870.3145308271155 3569.9419191196334 3458.6756968392324 3271.578959870926 1.0021253780219952 1.0444459704727485 1.1902999227803426 1.2595070145397467 1.2536030339538895 1.0247721680501052 1.1503788079549002 1.183011193769204 1.0911984588812977 1.0571885133335397 1.0 11.67577137536482 -9.719767634551824 0.7581526413049746 1.0092174065198207 1.1420954452470016 0.18504141658343287 0.08372963927537803 0.5827744999761745 0.7080124755531562 0.03488792388496669 0.019088145977083762 1.9064804907708332e-10 9.719767634551824 0.13287803872718085 VGLQVVAVK ddPTM_A549_PD325901_60min_R1 2 VGLQVVAVK 9 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 147.52 7.7747e-05 16573600.0 8559.3 9755.9 10111.9 10339.2 11433.400000000001 11884.3 11469.2 11442.2 10843.8 12001.1 10951.1 False True 9428.233834976367 10578.063931334023 10798.154341794407 10977.828901973113 10630.35742708872 11787.51820102711 11905.666682187062 11213.97634476775 10388.072796330289 11243.348497879468 9604.184124742544 0.9816798295950107 1.1014016176639665 1.1243177141904148 1.143025660419374 1.1068464836802245 1.2273315513245737 1.2396333230966887 1.1676136357983828 1.081619496399311 1.1706719021466974 1.0 13.229447346842106 -9.440578826316937 1.261892634168462 1.0201278371610891 1.1384935074524745 0.0 0.08040842128298215 0.3237252282078528 1.066535597494893 0.017529025732874143 0.013897090357068055 3.625944678160002e-10 9.440578826316937 0.11836567029138534 VGLSPDSPAGDRNS(ph)VGSEGSVGSIR ddPTM_A549_MK2206_60min_R1 2 VGLSPDSPAGDRNSVGSEGSVGSIR 25 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 VGLSPDSPAGDRNS(0.991)VGS(0.009)EGSVGSIR;VGLSPDSPAGDRNS(0.996)VGS(0.004)EGSVGSIR 211.73 3.997599999999999e-81 60398000.0 6065.4 6316.5 5384.799999999999 5991.9 7930.2 6508.0 6138.1 5412.4 9696.400000000001 8742.0 9906.0 True False 7089.09123520741 6637.9828700471335 6148.445610630765 7459.915768986611 6763.678085072419 7196.672240339229 7253.313317146675 6179.6242747798315 7500.180881969018 6767.176128417317 7446.066808308378 0.952058505209401 0.8914750620610093 0.8257306533659197 1.001859902823163 0.908355815116439 0.9665065363513965 0.974113381450375 0.8299179196034824 1.0072674708747251 0.9088255991561143 1.0 12.86226284519516 -8.875018386731186 24.581913182799966 1.00343539631011 0.9204695553037855 0.07471508888948541 0.06012096826005077 5.149291898063826 1089.6254061276404 0.00875248578570316 0.009317712011434357 1.3334649760440297e-09 8.875018386731186 -0.08296584100632443 VGLVEDSPSTAGDGDDSPVVSLTVPSTS(ph)PPSSSGLSR ddPTM_A549_MK2206_60min_R1 1 VGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSR 37 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VGLVEDSPSTAGDGDDS(0.002)PVVS(0.08)LT(0.08)VPS(0.119)T(0.119)S(0.466)PPS(0.032)S(0.032)S(0.032)GLS(0.04)R 56.055 0.00082732 5068500.0 374.91 281.5 0.0 199.79 416.79 337.68 429.4 325.45 566.77 599.63 537.41 True False 438.18564233053206 295.8271476162857 0.0 248.73855896891385 355.4807431183743 373.4130734661573 507.41642175637105 371.58353414882424 438.39749994570974 464.1731665388785 403.95626523854304 1.0847353538922735 0.7323246922326968 0.0 0.6157561606874188 0.8799980931313365 0.9243898550395067 1.2561172221372356 0.9198608020831113 1.0852598107045786 1.1490678731391288 1.0 8.658055296269321 -6.938657884030457 2.5790159302223565 1.040973071268463 0.5735354177283212 0.40296044089781213 0.2532668276841814 0.20866988955035487 2.8122083442245738 0.036847714712369466 0.07438693949816881 1.1517072904124398e-07 6.938657884030457 -0.4674376535401419 VGLVEDSPSTAGDGDDSPVVSLTVPSTS(ph)PPSSSGLSR ddPTM_A549_PD325901_60min_R1 1 VGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSR 37 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VGLVEDSPSTAGDGDDS(0.002)PVVS(0.007)LT(0.007)VPS(0.026)T(0.087)S(0.824)PPS(0.024)S(0.008)S(0.01)GLS(0.004)R 77.024 4.6017e-06 4201100.0 472.36 604.94 570.07 511.97 666.85 592.42 294.98 669.12 693.62 612.05 567.09 True False 520.3136394669469 655.9204168371148 608.7583783093917 543.5932241317678 620.0127565076103 587.5955279362249 306.20562531924963 655.773876685515 664.4695635285245 573.4050585468935 497.3415250796954 1.046189817718459 1.318853109504597 1.2240248352715823 1.0929978630774113 1.246653909319673 1.1814728879557503 0.6156848159223833 1.3185584625784705 1.336042799607469 1.1529402425325526 1.0 8.958093082458726 -7.549715422379026 24.99225703857612 1.1297221992603237 1.1925086323208571 0.039965670381395424 0.19330338383293977 952.7451532920437 887261.118449726 0.032571479530801306 0.04831183560198167 2.8202303218653215e-08 7.549715422379026 0.06278643306053344 VGMADANS(ph)PPKPLSK ddPTM_A549_MK2206_60min_R1 3 VGMADANSPPKPLSK 15 1 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 VGMADANS(1)PPKPLSK;VGMADANS(1)PPKPLSK;VGMADANS(0.997)PPKPLS(0.003)K 75.97 0.00017919 17344400.0 7535.9 9428.1 9289.0 8130.799999999999 11442.8 8829.6 8962.1 9717.6 12570.5 11147.300000000001 13011.8 True False 8807.775684934135 9907.950019328968 10606.319877646192 10122.84636500548 9759.579278185503 9763.942411385868 10590.397562698588 11095.099558901873 9723.301820963608 8629.117187863918 9780.610952589028 0.9005343048230159 1.0130195411469907 1.0844230415727343 1.0349912100660603 0.9978496563757138 0.9982957566471092 1.0827950947067577 1.1343973922165758 0.9941405366287216 0.8822677059432266 1.0 13.255708871592217 -5.266101639576712 5.753592381759892 1.01989308528861 0.8970721149248727 0.24065763944199603 0.06210068230253021 0.12422342172348809 17.674178718470895 0.0069688738525942595 0.059591386306464454 5.418740587296518e-06 5.266101639576712 -0.12282097036373718 VGMADANS(ph)PPKPLSK ddPTM_A549_PD325901_60min_R1 3 VGMADANSPPKPLSK 15 1 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 VGMADANS(0.996)PPKPLS(0.004)K;VGMADANS(0.991)PPKPLS(0.009)K;VGMADANS(0.997)PPKPLS(0.003)K 61.648 0.0014347000000000001 27363600.0 10499.5 11830.0 11833.7 12125.1 15051.8 12525.900000000001 14106.5 12999.599999999999 13070.7 13922.300000000001 13326.0 True False 11565.40151067663 12826.95561738861 12636.806043818913 12874.039888899932 13994.61349389105 12423.893223348907 14643.330576872984 12740.312780011089 12521.383933583642 13043.24360200541 11686.986480474034 0.9895965508302297 1.097541752000755 1.081271554898415 1.1015705297861995 1.1974526981161886 1.0630536147283183 1.2529603419442852 1.090128135366366 1.0713954323900068 1.116048488957982 1.0 13.512615354744412 -9.583418848427623 0.9859983625094654 1.0133641653557481 1.111691710933104 0.0018518629028897449 0.07244753059471827 0.4343631004574211 0.8832707383955215 0.01911742247509373 0.013079552342316442 2.609643311233607e-10 9.583418848427623 0.09832754557735579 VGMADANS(ph)PPKPLSKPR ddPTM_A549_MK2206_60min_R1 4 VGMADANSPPKPLSKPR 17 2 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 VGMADANS(1)PPKPLSKPR;VGMADANS(0.999)PPKPLS(0.001)KPR;VGMADANS(0.997)PPKPLS(0.003)KPR;VGMADANS(0.998)PPKPLS(0.002)KPR 69.763 0.00029091 191162000.0 11705.6 13109.0 14745.2 13582.8 17782.2 12715.199999999999 13314.4 12984.0 19513.2 18265.0 19367.1 True False 13681.219105556736 13776.192106933882 16836.291081910716 16910.586609755064 15166.461935937907 14060.71402433334 15733.454135614871 14824.521761832342 15093.49135617733 14138.923814406582 14557.714565232105 0.9397916853124264 0.9463155803202299 1.1565202083382298 1.16162372424462 1.0418161359036164 0.9658599886217207 1.0807640213794796 1.0183275469102442 1.0368036334648854 0.9712323834246818 1.0 13.829496262269636 -10.314373823928976 0.5131676371191181 0.9960651035739383 1.0439623339714188 0.06706081658008356 0.0712335850792938 3.5714671257374087 1.5693866383173625 0.08036469762276774 0.019019562634191377 4.8487096227630575e-11 10.314373823928976 0.047897230397480506 VGMADANS(ph)PPKPLSKPR ddPTM_A549_PD325901_60min_R1 5 VGMADANSPPKPLSKPR 17 2 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 VGMADANS(1)PPKPLSKPR;VGMADANS(0.997)PPKPLS(0.003)KPR;VGMADANS(1)PPKPLSKPR;VGMADANS(0.979)PPKPLS(0.021)KPR;VGMADANS(0.998)PPKPLS(0.002)KPR 132.01 1.5249999999999999e-12 308911000.0 24152.7 24430.0 26234.0 25556.1 32634.800000000003 29645.600000000002 28631.2 30495.6 28868.2 30483.700000000004 30029.899999999998 True False 26604.664323722012 26488.80183709245 28014.396997857395 27134.642254885763 30342.64423194806 29404.176062567352 29720.77598359381 29887.341334664598 27654.9699458697 28558.95397961923 26336.412675220403 1.0101855803905293 1.0057862535703441 1.0637134731798832 1.0303089714422802 1.1521175873924951 1.1164837225623128 1.1285050986293859 1.1348296255543269 1.0500659405253743 1.0843904343316273 1.0 14.684771226733497 -4.214641061393529 16.129177701637275 1.0508635676408042 1.0642260169501707 0.0 0.05690738198131876 0.0 0.0 0.00851343811283642 0.0 6.100408796081564e-05 4.214641061393529 0.013362449309366475 VGMADANSPPKPLS(ph)KPRTPR ddPTM_A549_PD325901_60min_R1 1 VGMADANSPPKPLSKPRTPR 20 3 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 VGMADANSPPKPLS(0.5)KPRT(0.5)PR 68.55199999999999 0.00023989 3933400.0 862.36 1008.6 1027.3 945.99 1110.3 1177.3 740.74 995.94 1270.7 1061.7 1187.6 True False 949.9061523641216 1093.5982616820083 1097.0187556567398 1004.4216538008308 1032.31635832706 1167.7124591325712 768.929266048481 976.0751954001843 1217.2968979782815 994.6640808091441 1041.5327288166707 0.9120271750301597 1.0499893391967543 1.053273435682726 0.9643687865113914 0.9911511465414229 1.1211481183690297 0.7382670220282891 0.93715268699155 1.1687553010084513 0.9550003118377509 1.0 10.024492459575567 -8.74262187882774 24.987436046529446 1.0796900163040577 0.9740110285727408 0.04796894939361085 0.10647140579663827 321.40095410667175 426782.6174690939 0.018343783540127293 0.020782652344806876 1.808748238478236e-09 8.74262187882774 -0.1056789877313169 VGMVETNS(ph)QDRPVDDVK ddPTM_A549_MK2206_60min_R1 1 VGMVETNSQDRPVDDVK 17 1 Q9Y3C6 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 1 VGMVET(0.176)NS(0.824)QDRPVDDVK 114.88 4.5287e-10 6008100.0 2737.0 2766.4 2799.4 2300.9 4006.2 2733.2 2936.0 2845.0 4127.7 4578.8 3847.5 True False 3198.938686774604 2907.1979437502414 3196.3970142623257 2864.620603291328 3416.8932869810474 3022.4254098486763 3469.433195800432 3248.287462447087 3192.7825405824356 3544.4458998852924 2892.0595644020286 1.1061109273646743 1.0052344631952084 1.1052320822179271 0.9905123112094774 1.1814740363715623 1.0450771647483694 1.199640988901203 1.123174467922383 1.1039822899507208 1.225578457481789 1.0 11.497881550776318 -10.628445959651277 0.9719321339414896 1.0016364377558382 1.094658408464019 0.0 0.09020171219981475 0.5867497127607297 1.0128476325154014 0.036199235376523184 0.010488645032416196 2.352632219088146e-11 10.628445959651277 0.09302197070818075 VGNES(ph)PVQELK ddPTM_A549_MK2206_60min_R1 4 VGNESPVQELK 11 0 Q5JSH3-2;Q5JSH3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK 242.92 3.3827999999999995e-50 149317000.0 42625.1 50100.8 44020.8 43349.1 64968.4 50558.2 47107.8 53063.3 69489.1 66715.3 65900.3 True False 49819.17479635954 52650.71672218119 50263.61137580874 53969.63144601507 55411.63442311908 55908.23516618298 55666.67748676004 60585.18527454084 53749.92980129053 51644.26739421182 49535.436754246395 1.0057279810314548 1.0628899263246678 1.0147000747197392 1.0895156070545509 1.1186261402725788 1.1286513015632245 1.123774839473643 1.2230675501078976 1.0850803651525864 1.042572162034781 1.0 15.596173351984298 -3.752630282379937 14.055581745590153 1.0675519199055727 0.5530088542296002 0.0 0.06487890091323519 0.0 0.0 0.009717973895464468 0.0 0.00017675418998998498 3.752630282379937 -0.5145430656759725 VGNES(ph)PVQELK ddPTM_A549_PD325901_60min_R1 2 VGNESPVQELK 11 0 Q5JSH3-2;Q5JSH3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VGNES(1)PVQELK;VGNES(1)PVQELK 225.21 1.4679999999999998e-39 252040000.0 28469.0 27467.0 28005.0 27989.0 34207.0 25320.0 28414.0 30155.0 29000.0 28709.0 33047.0 True False 31359.15192222988 29781.74048544487 29905.58770774554 29717.816962368986 31804.418327743628 25113.80231481924 29495.31031873739 29553.53486886014 27781.23085021656 26896.30884049142 28982.4285021931 1.0820056683606392 1.0275791927923255 1.0318523758449913 1.0253735969751547 1.0973689911919213 0.866518218544691 1.0176963023131578 1.0197052626774814 0.9585542787801359 0.9280212263253294 1.0 14.822890866137872 -7.205841200496737 24.99999983576978 0.9792316864048441 1.048741345400545 0.4504579872242037 0.046762153899515796 239.87574003544725 107861.24174403783 0.0062069162057975255 0.01075069154320179 6.225278704814301e-08 7.205841200496737 0.06950965899570083 VGNES(ph)PVQELKQDVSK ddPTM_A549_MK2206_60min_R1 2 VGNESPVQELKQDVSK 16 1 Q5JSH3-2;Q5JSH3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VGNES(1)PVQELKQDVSK;VGNES(1)PVQELKQDVSK 65.95100000000001 0.00074186 9458700.0 2559.3 3361.8999999999996 2284.7 2288.6 3711.8999999999996 2797.8 2441.3 1793.0900000000001 4003.0 4857.299999999999 4761.6 True False 2991.247271122484 3533.0063501640875 2608.7048147764267 2849.3071027391575 3165.8844271241956 3093.861338970666 2884.8526093009527 2047.26599860782 3096.326891477455 3760.0325564586383 3579.1633065254573 0.8357392538275366 0.9871039814592373 0.7288588397238789 0.7960818936493786 0.8845319858281459 0.8644091017948249 0.806013127157777 0.5719956937632006 0.8650979646087383 1.0505339473064623 1.0 11.805406655781415 -9.885187083455959 1.1606024488778015 0.9776568313005211 0.8166520941900889 0.36920284136018267 0.10159740727866863 0.37871335353904667 1.0325085344769955 0.031264189075005944 0.019196832179596012 1.3026055269270015e-10 9.885187083455959 -0.16100473711043217 VGNES(ph)PVQELKQDVSK ddPTM_A549_PD325901_60min_R1 2 VGNESPVQELKQDVSK 16 1 Q5JSH3-2;Q5JSH3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VGNES(1)PVQELKQDVSK;VGNES(1)PVQELKQDVSK 63.184 0.00095764 18793100.0 3565.3 3083.6 2898.8 3450.3 3677.2 4155.9 4322.6 4451.3 4076.7 4037.6 4160.6 True False 3927.2466313648615 3343.4657938951395 3095.5299999004756 3663.4171948001595 3418.9261576513227 4122.055728284252 4487.098908417481 4362.515329522701 3905.370476106131 3782.665246938873 3648.872576216439 1.0762904292583086 0.9163010557529582 0.8483524527760486 1.003986058235775 0.936981515862209 1.129679275497875 1.2297220071933037 1.1955789736144327 1.0702951102106333 1.0366668520009448 1.0 11.833235055515843 -7.2466559460074675 23.90469864298694 1.0699073695523578 0.9507985490769622 0.40193731795589316 0.0859979887889484 503.37880671722786 813958.2733374226 0.0145810551232086 0.025179012760997748 5.66688049234201e-08 7.2466559460074675 -0.11910882047539562 VGNES(ph)PVQELKQDVSKK ddPTM_A549_PD325901_60min_R1 1 VGNESPVQELKQDVSKK 17 2 Q5JSH3-2;Q5JSH3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VGNES(1)PVQELKQDVSKK 70.453 0.0002572 3388300.0 1405.7 1510.8 1645.4 2107.1 1653.5 2495.5 1934.4 2093.3 2412.9 2097.1 2367.1 True False 1548.4056291783545 1638.1204181530618 1757.0667385939842 2237.2507814286923 1537.3638642653284 2475.177475380389 2008.0146505442972 2051.547489337918 2311.4942040857763 1964.6887481066751 2075.9617062832126 0.7458738879873701 0.7890899014153498 0.8463868737443255 1.0776936658596898 0.7405550206500745 1.1923040140330572 0.9672696006225628 0.98823956295947 1.1134570532248687 0.9463993204500097 1.0 11.019564116284256 -5.819864296297655 0.5851629769429145 1.0500077494447932 0.636250865070315 0.4060462382519944 0.11095634929186791 1.269656648164677 0.42534032782071335 0.018402368010023706 0.31121445460145103 1.514034263790985e-06 5.819864296297655 -0.4137568843744782 VGPAT(ph)PSAQVGK ddPTM_A549_MK2206_60min_R1 1 VGPATPSAQVGK 12 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGPAT(0.764)PS(0.236)AQVGK 95.98100000000001 0.00027306 22171000.0 12577.0 13401.0 12565.0 12349.0 15935.0 12413.0 11630.0 12684.0 17175.0 19025.0 19270.0 True False 14699.690121872196 14083.053659701049 14346.90593848901 15374.505554367666 13590.982608966866 13726.535420917458 13743.020458841633 14481.995843120862 13284.889922839187 14727.239286563663 14484.727175055767 1.0148406624590498 0.9722691694154625 0.9904850650688057 1.0614287289334792 0.9382974525313792 0.9476557794306272 0.948793877354388 0.9998114336637552 0.9171653537056034 1.0167426081676931 1.0 13.822244890743828 -6.794897146685247 24.999988839087273 0.9597867901527313 1.0057019407527523 0.23868988833127136 0.03509433229387559 193.1643397688644 144333.92763292685 0.005319808713780366 0.010053957885160692 1.603625129870743e-07 6.794897146685247 0.04591515060002105 VGPAT(ph)PSAQVGK ddPTM_A549_PD325901_60min_R1 1 VGPATPSAQVGK 12 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGPAT(0.712)PS(0.288)AQVGK 115.24 2.8386999999999998e-05 37682000.0 25373.0 23991.0 21894.0 24754.0 29363.0 23029.0 25573.0 23938.0 24884.0 25235.0 26154.0 True False 27948.848281384642 26012.805766421836 23379.858499317317 26282.998359587033 27300.644176850805 22841.459459240617 26546.19450908256 23460.537811002294 23838.212016440993 23641.657793367965 22937.223803865963 1.2184930713661168 1.134086931742694 1.019297657782663 1.1458665871829334 1.190233151592191 0.9958249374272921 1.1573412168829396 1.022815054324409 1.039280613045384 1.0307113884193462 1.0 14.485403165551428 -2.0000000007583996 0.10959461504013833 0.9492069315698651 1.6212311427079193 0.384112870066874 0.061978469204921366 64.52653122201127 0.47756162174691064 0.28316404250959815 6.591747276974579 0.009999999982537205 2.0000000007583996 0.6720242111380542 VGPATPS(ph)AQVGK ddPTM_A549_PD325901_60min_R1 1 VGPATPSAQVGK 12 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGPAT(0.247)PS(0.753)AQVGK 137.88 1.9211e-08 39592000.0 18969.0 18886.0 16457.0 17827.0 20088.0 16416.0 18148.0 18443.0 20563.0 18609.0 20927.0 True False 20894.71891576025 20477.58950042277 17573.870983980312 18928.133301945487 18677.08817983785 16282.313538707447 18838.63207096664 18075.139896746394 19698.808619758733 17434.024564168183 18353.111667182955 1.1384837238865562 1.115755729696702 0.957541767448841 1.031331015971026 1.017652402411641 0.8871690988412453 1.026454391636043 0.9848542429492433 1.0733225502562602 0.9499220012561584 1.0 14.163737064211071 -5.646572435737534 6.802715810192022 1.0164624871226535 1.132257651793099 0.4549176810181661 0.05181948730036918 0.15027357128908328 8.216331950733322 0.007155579019157767 0.028232579354367442 2.256459610453447e-06 5.646572435737534 0.11579516467044537 VGPCSS(ph)PPAAR ddPTM_A549_MK2206_60min_R1 2 VGPCSSPPAAR 11 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 VGPCS(0.068)S(0.932)PPAAR;VGPCS(0.21)S(0.79)PPAAR 78.683 0.0010307 40252000.0 5016.5 5264.0 4708.4 4561.5 6893.0 5595.6 5223.4 4505.3 6860.1 7412.4 8433.4 True False 5863.162558350312 5531.915115638109 5376.121919680194 5679.067704773517 5879.048831101888 6187.722677941332 6172.42416721525 5143.940071902593 5306.2983033286255 5737.933691864623 6339.154030000792 0.9249124616001134 0.8726582584139255 0.8480819198014538 0.895871543410471 0.9274185172467175 0.9761117411972019 0.9736984048665684 0.8114552900210804 0.8370672613752473 0.9051576384970577 1.0 12.630074607967426 -11.00256748909833 1.3140479720608542 0.9993668212455037 0.8908848712934229 0.0369943558539344 0.057226375740209015 0.40872676063575986 1.2682845812518393 0.03876535631479099 0.009052466090851755 9.941055785467742e-12 11.00256748909833 -0.10848194995208083 VGPDGKELIPQES(ph)PR ddPTM_A549_MK2206_60min_R1 2 VGPDGKELIPQESPR 15 1 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 VGPDGKELIPQES(1)PR;VGPDGKELIPQES(1)PR 98.175 3.5632e-06 14459800.0 5437.1 5469.8 5473.5 5093.9 7592.9 5492.200000000001 4973.1 4152.6 8827.9 7570.9 8394.2 True False 6354.749555667591 5748.189456595238 6249.724604402673 6341.90572867386 6475.994468253813 6073.380958572702 5876.647897150924 4741.243766804143 6828.394745259505 5860.628431781591 6309.68847186576 1.0071415703014108 0.9110100256495725 0.9904965407198059 1.0051059980142845 1.0263572436467494 0.9625484658479213 0.931368945290133 0.7514227981214686 1.0822079054626232 0.9288300774140464 1.0 12.623353061472244 VGPDGKELIPQES(ph)PR ddPTM_A549_PD325901_60min_R1 2 VGPDGKELIPQESPR 15 1 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 VGPDGKELIPQES(1)PR;VGPDGKELIPQES(1)PR 94.885 5.8473e-06 25606000.0 5871.0 6737.6 7442.5 7503.0 8932.5 9116.5 8297.8 8932.7 8522.4 8556.7 8840.1 True False 6467.019597998232 7305.401197609258 7947.592805388187 7966.443269450661 8305.112015452098 9042.258246565938 8613.57731973038 8754.530290932411 8164.233165444327 8016.428501704441 7752.823742010997 0.834150215869703 0.9422890859781519 1.0251223386289277 1.0275537706709497 1.0712370475351272 1.1663180471352332 1.1110245255615876 1.1292053814526142 1.0530657521857467 1.0340011289389983 1.0 12.92050615074241 -5.404882661543654 1.42109194928496 1.0528833911855389 0.7787946960799177 0.6890139712005157 0.04868724075869495 0.5322560597744797 1.1590462494318516 0.008702662989021979 0.19086987134870748 3.936564198813634e-06 5.404882661543654 -0.27408869510562117 VGPNATYNFSQSLNANDLANS(ph)RPKTPFK ddPTM_A549_PD325901_60min_R1 1 VGPNATYNFSQSLNANDLANSRPKTPFK 28 2 Q9Y5V3;Q9Y5V3-2 Q9Y5V3 MAGED1 Melanoma-associated antigen D1 1 VGPNATYNFSQSLNANDLANS(0.5)RPKT(0.5)PFK 199.97 8.052099999999999e-78 12753000.0 2183.2 2031.5 2017.2 2125.1 2893.4 2673.1 2248.7 2947.5 2737.1 2196.0 2745.0 True False 2404.8368568131045 2202.701634549871 2154.099322409011 2256.3626005477254 2690.1775656881173 2651.3311598634805 2334.275509035855 2888.709800230983 2622.069205521647 2057.344185228296 2407.3824019886843 0.9989426087133157 0.9149778750273612 0.8947890125929135 0.937268046274574 1.1174699804508923 1.101333613502066 0.9696322059626101 1.1999380729229745 1.0891785215990675 0.8545979996899413 1.0 11.233249610368835 -6.739703814603403 22.38385612365308 1.0584853432589405 0.9319782535738707 0.2626892536204358 0.08807839207058013 52.293296225188826 53851.657876082405 0.009584425380257352 0.019928636437853763 1.8209423034613046e-07 6.739703814603403 -0.12650708968506985 VGPNATYNFSQSLNANDLANSRPKT(ph)PFK ddPTM_A549_MK2206_60min_R1 2 VGPNATYNFSQSLNANDLANSRPKTPFK 28 2 Q9Y5V3;Q9Y5V3-2 Q9Y5V3 MAGED1 Melanoma-associated antigen D1 1 VGPNATYNFSQSLNANDLANS(0.224)RPKT(0.776)PFK;VGPNATYNFSQSLNANDLANS(0.144)RPKT(0.856)PFK 228.53 1.2345999999999995e-104 16043000.0 3064.3 2982.6 3644.8 2812.5 3887.8 3008.2 3387.9 3476.2 5009.0 5278.8 4350.0 True False 3581.478925057881 3134.401600285378 4161.687446446853 3501.562626257921 3315.909770137519 3326.525727318451 4003.4375763120865 3968.961995416017 3874.469497729342 4086.3154137141796 3269.774946107554 1.095328878619426 0.9585985738916593 1.2727748897217102 1.070887961395109 1.0141094799459778 1.0173561734817422 1.2243771031024346 1.2138333863438515 1.1849346091362147 1.2497237519599511 1.0 11.674975625184198 -7.6626748249492636 17.805472544597365 1.1108607939411563 1.0729099477930504 0.06689439289250554 0.10471885491176666 7.199936935187018 1275.76347493375 0.017131610257383197 0.025410271571509113 2.174328583328154e-08 7.6626748249492636 -0.037950846148105954 VGPNATYNFSQSLNANDLANSRPKT(ph)PFK ddPTM_A549_PD325901_60min_R1 1 VGPNATYNFSQSLNANDLANSRPKTPFK 28 2 Q9Y5V3;Q9Y5V3-2 Q9Y5V3 MAGED1 Melanoma-associated antigen D1 1 VGPNATYNFSQSLNANDLANS(0.042)RPKT(0.958)PFK 226.64 1.6143999999999998e-104 15751000.0 2603.9 2182.7 2100.0 2556.2 2701.3 2786.4 2725.2 2752.9 2789.3 2843.6 2684.9 True False 2868.246011110136 2366.6437891863175 2242.518628325858 2714.0906684485903 2511.570006979094 2763.7084822279758 2828.908977286659 2697.9912498917274 2672.0754210520363 2664.0546107081864 2354.6743209833962 1.2181073134191458 1.0050832797114475 0.9523689150308066 1.1526395154787643 1.0666315866264566 1.1737115649495649 1.2014013794082596 1.145802298793045 1.134796178494902 1.1313898431591092 1.0 11.201311816689557 -5.237977408453893 23.35495528120075 1.0814344098432578 1.2181076963625936 0.14397630380089932 0.07792866863368257 3713.8296294392685 3696749.941421385 0.011853497059378042 0.844672478754312 5.781261201414894e-06 5.237977408453893 0.13667328651933586 VGRFS(ph)VSK ddPTM_A549_MK2206_60min_R1 1 VGRFSVSK 8 1 F5GWT4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;Q9H4A3-4 F5GWT4 WNK1 Serine/threonine-protein kinase WNK1 1 VGRFS(0.986)VS(0.014)K 44.318000000000005 0.016915 1350100.0 1558.6 1683.3 1548.6 1147.7 2117.1 1385.7 1206.7 1270.6 2174.9 1729.4 2207.3 True False 1821.6535758885266 1768.9727800443832 1768.2147661236825 1428.8865515222103 1805.6773945054106 1532.3338542467848 1425.9417702222004 1450.7114410493039 1682.2886226016271 1338.7273388795363 1659.166491619128 1.0979329591636295 1.0661815971934792 1.0657247329037713 0.8612074549117763 1.08830391864008 0.9235564134081738 0.8594325990941807 0.874361583588637 1.0139359920172537 0.8068673913328099 1.0 10.69624294767763 -6.034783737021931 24.472541088399026 0.9783451740187242 1.0780313393733332 0.2476568823208144 0.08813395034049168 467.72953949838154 329077.1302446851 0.010424855184101524 0.027598437092819752 9.230309488325036e-07 6.034783737021931 0.09968616535460895 VGRPTASK ddPTM_A549_PD325901_60min_R1 2 VGRPTASK 8 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 0 ; 59.35 0.012843 10581500.0 5190.0 4176.6 4482.4 4601.6 6212.7 5957.2 4076.4 5464.7 6280.8 4944.9 5719.0 False True 5716.884979323937 4528.576739778978 4786.60261886087 4885.83038100815 5776.341384651468 5908.686538303368 4231.5296326916705 5355.702271525781 6016.839818070346 4632.678170098084 5015.5992557279715 1.1398209242484985 0.9028984392258216 0.9543431153105824 0.9741269451358935 1.1516752216706119 1.178061929799408 0.8436737898984117 1.0678090490202943 1.1996253112125987 0.9236539711196863 1.0 12.292206366679562 -6.738813633734992 24.745607130685894 1.0847396243570384 0.9836292215083374 0.007530426715451788 0.11668847817343196 330.03811976140327 360957.97549517074 0.016556030478892488 0.034444828632518215 1.8246785480309485e-07 6.738813633734992 -0.10111040284870099 VGS(ph)AQPSPPDDLDAGGLAQR ddPTM_A549_MK2206_60min_R1 1 VGSAQPSPPDDLDAGGLAQR 20 0 Q8N3D4;H0YDZ9;E9PIH6;A0A0U1RQH4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 VGS(0.723)AQPS(0.277)PPDDLDAGGLAQR 80.238 0.00021005 2188900.0 652.32 1315.9 971.81 936.03 1290.0 1017.2 951.0 973.53 1640.5 1605.7 1550.9 True False 762.4156683072013 1382.8736893366613 1109.6272709974535 1165.357392019983 1100.2427088526663 1124.8394288372867 1123.784390056611 1111.5308588105843 1268.9293693401862 1242.9712547929184 1165.7687273375195 0.6540025053240793 1.186233304177737 0.9518416860707126 0.9996471552994256 0.9437915797977297 0.9648907218555172 0.9639857063443485 0.9534745895519018 1.0884915160130206 1.0662245655119953 1.0 10.187065890509704 -8.743116442475424 24.645059577843544 1.0417876615670942 0.9621330484776861 0.1188907241178635 0.11740590880500072 356.92831713299836 480081.59671745606 0.018009029006459572 0.020400816323143205 1.8066896537698827e-09 8.743116442475424 -0.07965461308940813 VGS(ph)EHSLLDPPGK ddPTM_A549_MK2206_60min_R1 1 VGSEHSLLDPPGK 13 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 VGS(0.964)EHS(0.036)LLDPPGK 96.414 5.1183e-05 11710000.0 857.12 874.66 822.02 897.68 1565.3 994.58 1090.3 1136.2 1718.2 1922.8 2193.8 True False 1001.7809014279312 919.1764580250814 938.5947966221038 1117.6116402983866 1335.0464435403715 1099.8257954512276 1288.3933969282043 1297.2598294665668 1329.0304434015889 1488.4381445574038 1649.0189142001736 0.6075011589020048 0.5574080746495931 0.569183766504796 0.6777433725437065 0.8096004430536876 0.6669576594788046 0.7813090473574804 0.7866858398624123 0.8059522131352936 0.9026204197781099 1.0 10.687392231203567 -7.323056035921461 0.0770681454823784 1.4244196438924903 6.485410558745319e-18 0.8304625730704152 0.05501181595740768 7.166381998145089 0.20078399245412104 1.4347303436901608 2.2353167379998955 4.75273898594211e-08 7.323056035921461 -1.4244196438924903 VGS(ph)EHSLLDPPGK ddPTM_A549_PD325901_60min_R1 1 VGSEHSLLDPPGK 13 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 VGS(0.738)EHS(0.262)LLDPPGK 104.95 3.3145e-05 26457000.0 1627.3 1181.5 1374.8 1479.5 1719.6 1214.1 1432.0 1711.6 1961.2 1309.3 1844.8 True False 1792.5022980450556 1281.0691514746113 1468.1021953439947 1570.8853548117088 1598.8212282979478 1204.2127721335717 1486.4955436204673 1677.460795275776 1878.7775842567137 1226.6305745534646 1617.90129515072 1.1079182045392146 0.7918092131542981 0.9074114717283972 0.9709401676851793 0.988206903035457 0.7443054627268779 0.9187801184632767 1.036812814418019 1.161243636980766 0.7581615629025098 1.0 10.659907879240684 -8.325453454769416 4.146854037398378 1.0767790208534516 0.9108891758476172 0.0 0.13661228744073767 0.1861691540307761 6.439169098660347 0.0168545001874345 0.020678831508172967 4.726574909451818e-09 8.325453454769416 -0.16588984500583437 VGS(ph)EIER ddPTM_A549_MK2206_60min_R1 1 VGSEIER 7 0 A0A087X0X3;P52272-2;P52272;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 VGS(1)EIER 57.858999999999995 0.034151 7486300.0 594.67 490.21 396.44 586.96 578.54 406.07 417.35 588.95 540.51 743.07 744.8 True False 695.0357577143783 515.1595951437988 452.66115322360355 730.7652263496358 493.4375323873037 449.04005787254914 493.1770927340972 672.4354660837305 418.08534801710664 575.2099709154724 559.8456045657257 1.2414775646109075 0.9201815481670343 0.8085464091027998 1.305297782799408 0.8813814529633844 0.8020783841303375 0.8809162538958513 1.201108771060802 0.746786872322445 1.0274439349428577 1.0 9.128885202232176 VGS(ph)EIER ddPTM_A549_PD325901_60min_R1 2 VGSEIER 7 0 A0A087X0X3;P52272-2;P52272;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 VGS(1)EIER;VGS(1)EIER 66.692 0.024082 20364500.0 1594.13 2032.2200000000003 1527.88 1724.48 1894.59 2061.38 1973.19 1953.9699999999998 1784.98 1959.13 1842.0099999999998 True False 1755.96490406352 2203.4823114767096 1631.5711246888154 1830.9972130217602 1761.5205343806751 2044.5928047283612 2048.2808252209998 1914.9965354901888 1709.9634980351566 1835.430197452782 1615.4544474634515 1.0869789035653061 1.3640015135905352 1.0099765593828225 1.1334254679212705 1.0904179546173978 1.2656455946119265 1.267928556225873 1.1854228006843963 1.0585030736831367 1.1361695777523972 1.0 10.657724354766984 -8.872833961482412 3.2700699623710197 1.0242110576804946 1.1783094499947597 0.16946641619865788 0.10004228276902877 0.1949085395356325 3.927009776389893 0.016706281078253695 0.017577829552487666 1.340188967611177e-09 8.872833961482412 0.15409839231426514 VGS(ph)GSLDNLGR ddPTM_A549_MK2206_60min_R1 1 VGSGSLDNLGR 11 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VGS(0.951)GS(0.049)LDNLGR 101.72 0.00024372 14266000.0 638.14 979.1 1164.7 806.81 1299.3 907.13 823.51 891.17 1387.8 1252.7 1515.7 True False 745.8424309749164 1028.9320079257734 1329.8719734626457 1004.4784862190769 1108.1746911723026 1003.1218944958404 973.1311073139005 1017.496076593663 1073.465515861206 969.7141999620651 1139.3098588080966 0.6546440594792964 0.9031186730905705 1.1672610073381688 0.8816552217584818 0.9726719053687761 0.8804645081762648 0.8541408641297583 0.8930810777483568 0.9422068171903872 0.8511417613611664 1.0 10.153944455738447 -14.999999995319511 0.013121751942133763 2.0788583633660296 3.2932526095204613e-10 0.0 0.11988904138675512 10201.963127643015 10.418341710675438 999.6457183491707 679.8920990434632 1.000000010777224e-15 14.999999995319511 -2.078858363036704 VGS(ph)LDNVGHLPAGGAVK ddPTM_A549_MK2206_60min_R1 4 VGSLDNVGHLPAGGAVK 17 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK 182.7 3.5826e-39 273324200.0 6444.9 7174.44 7045.99 7053.2 9221.199999999999 7684.9 8727.900000000001 6833.3099999999995 11518.2 10748.3 11204.8 True False 7532.641557323218 7539.588351489108 8045.217331757586 8781.234316630174 7864.773695249778 8498.111017176234 10313.646454232485 7801.952618634202 8909.346090785808 8320.251564981447 8422.338923251937 0.8943645733048702 0.8951893791253427 0.9552236504692048 1.0426123190539647 0.9337992411510699 1.0089965619544363 1.224558468640953 0.9263403776230132 1.0578232688059332 0.9878789776568296 1.0 13.040005216813181 -5.9530017050312605 1.0136688275346635 1.0309138236814668 0.8683502937131543 0.3023899424375007 0.0752482108869658 0.7075445996489108 1.0378730470672317 0.01091840597319493 0.09538782401067088 1.114290158902751e-06 5.9530017050312605 -0.16256352996831247 VGS(ph)LDNVGHLPAGGAVK ddPTM_A549_PD325901_60min_R1 8 VGSLDNVGHLPAGGAVK 17 0 E7EVA0;P27816-4;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK 171.72 7.2769e-30 507588400.0 38315.299999999996 37890.3 40141.00000000001 41849.8 45918.0 46813.2 42863.99999999999 47186.1 47078.9 42998.3 44675.899999999994 True False 42205.041049766915 41083.44855701943 42865.20964744207 44434.76709820819 42692.87808850036 46431.968820067006 44495.2129760808 46244.93621872068 45100.337554284815 40283.37999986423 39181.047523863854 1.0771800070955542 1.048554113618246 1.0940291890188572 1.1340882877402518 1.0896308492644962 1.1850619560844273 1.135631020303382 1.1802884083319736 1.1510753388309927 1.0281343288570572 1.0 15.257868348805825 -10.783650106272221 1.0556884142598597 1.0006974948665495 1.1233399747446775 0.5028816241659568 0.04097242949871728 0.33105252398847423 0.6609003950851071 0.029588676317505936 0.007626077589208736 1.6456970616862907e-11 10.783650106272221 0.12264247987812804 VGS(ph)LDTSKPR ddPTM_A549_MK2206_60min_R1 2 VGSLDTSKPR 10 1 A0A2H2EQP0;Q9Y2W3 A0A2H2EQP0 SLC45A1 Proton-associated sugar transporter A 1 VGS(0.987)LDT(0.006)S(0.007)KPR;VGS(0.979)LDT(0.009)S(0.012)KPR 68.515 0.001131 14531200.0 2068.17 3393.9 3268.1000000000004 3817.5 5626.6 3952.8 4114.6 4390.3 6772.0 6218.299999999999 6338.4 True False 2417.226534098147 3566.635013481038 3731.565722051406 4752.787671374085 4798.934593511951 4371.0826723437185 4862.169559754922 5012.638469729864 5238.152812661833 4813.581711203088 4764.400349059339 0.507351682688755 0.7486010310164675 0.7832183378099511 0.9975626150544745 1.007248392645977 0.9174465519478701 1.0205207798532059 1.0521026997069076 1.0994359056530651 1.0103226762111752 1.0 12.218078931561632 -4.99272620482641 0.6094351600293627 1.044288381401437 2.576383264767116e-21 0.9151394687010861 0.04860729253505309 0.8984206606918277 0.1804436841236183 0.009306465849159892 0.7061517410653502 1.0168895753246884e-05 4.99272620482641 -1.044288381401437 down VGS(ph)LDTSKPR ddPTM_A549_PD325901_60min_R1 2 VGSLDTSKPR 10 1 A0A2H2EQP0;Q9Y2W3 A0A2H2EQP0 SLC45A1 Proton-associated sugar transporter A 1 VGS(0.985)LDT(0.014)S(0.001)KPR;VGS(0.662)LDT(0.284)S(0.053)KPR 84.365 0.00025382 34826000.0 8390.6 7968.799999999999 8709.2 8837.2 9373.9 8781.5 8275.2 9073.8 9198.3 9532.6 9192.0 True False 9242.407535166747 8640.358742506034 9300.258684674078 9383.053773262614 8715.509602199432 8709.986375497043 8590.117264363189 8892.81594074161 8811.72743894989 8930.710009156308 8061.442272888885 1.146495530489565 1.0718130143490676 1.1536718083253423 1.1639423139973835 1.0811352742064797 1.080450132948201 1.0655806955601816 1.1031296435190865 1.0930708353000629 1.1078302996959766 1.0 12.976822259122388 -14.999999999982567 0.1488468097654693 0.6017871641398027 1.142310075742231 0.039540023779382594 0.04369784128827675 27.298438900109435 0.26816408500636746 3.1756906786129178 0.05882642623148342 1.0000000000401413e-15 14.999999999982567 0.5405229116024284 VGS(ph)PERPLSDLGLISYR ddPTM_A549_MK2206_60min_R1 1 VGSPERPLSDLGLISYR 17 1 O95251-4;O95251;O95251-2;O95251-3;O95251-5;E7EUP3 O95251-4 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase 1 VGS(0.999)PERPLS(0.001)DLGLISYR 41.521 0.024638999999999998 2287200.0 383.54 439.99 263.39 297.09 615.14 508.69 402.82 233.09 332.74 650.4 515.16 True False 448.27217534728965 462.3836116507621 300.74266256574765 369.8770633368767 524.6537208710307 562.5192381589064 476.0071798134638 266.13122130818704 257.37492127659465 503.47418827758213 387.23155430730316 1.1576333859186105 1.1940752413059268 0.7766481300929347 0.9551831694050064 1.3548836995207025 1.4526689054696629 1.2292572093329697 0.687266361297065 0.6646537928372036 1.300188950712498 1.0 8.597052707955001 -8.254340620283593 24.891023108515235 0.8256391833523088 1.1574810965676452 0.16766152553557767 0.2372599928003979 466.82110425280854 1636857.7697941826 0.03620963951727374 0.046240351121532804 5.567489154725453e-09 8.254340620283593 0.3318419132153364 VGS(ph)PERPLSDLGLISYR ddPTM_A549_PD325901_60min_R1 1 VGSPERPLSDLGLISYR 17 1 O95251-4;O95251;O95251-2;O95251-3;O95251-5;E7EUP3 O95251-4 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase 1 VGS(1)PERPLSDLGLISYR 81.57600000000001 6.2413e-05 5200700.0 469.95 588.41 384.74 589.25 608.18 386.32 548.77 417.14 512.41 505.44 681.0 True False 517.6589780410953 637.9973757250748 410.8507700295671 625.6466342161538 565.4635349070983 383.17393800398787 569.6537426484666 408.8198154600005 490.8751896537744 473.52643214106973 597.2413172146795 0.8667501110862058 1.0682405207671617 0.6879141783854281 1.0475608705940616 0.9467923912970699 0.6415730575891407 0.9538083287759268 0.684513618995066 0.8219042713639458 0.7928561177740149 1.0 9.222170164488347 -4.319774532031177 16.61134260826526 0.889947192598329 0.8790107304933601 0.0 0.1462738551096695 0.0 0.0 0.018227519691193947 0.0 4.788786420436395e-05 4.319774532031177 -0.010936462104968903 VGS(ph)PLTLTDAQTR ddPTM_A549_MK2206_60min_R1 2 VGSPLTLTDAQTR 13 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VGS(0.995)PLT(0.005)LTDAQTR;VGS(0.996)PLT(0.004)LTDAQTR 220.99 4.9380999999999995e-39 165908000.0 7651.1 8592.2 7467.5 7352.2 10185.0 7544.700000000001 6903.8 6505.6 10985.900000000001 10470.6 11546.2 True False 8942.418628564545 9029.506279746538 8526.503787955959 9153.489330052798 8686.799991987915 8343.075146233465 8158.131095765331 7427.788722564422 8497.61119087738 8105.284187852481 8678.959881091274 1.0303560278055053 1.0403903697514485 0.9824338290274311 1.0546758431267063 1.0009033468300415 0.961298964454301 0.939989492697084 0.8558385825411221 0.9791047898943518 0.9339004095999278 1.0 13.08330643973908 -7.01989267475645 5.712663977736248 0.9729497762720225 1.025237505285443 0.3707717931313801 0.04284730695774595 0.21083965236731167 23.071928926050777 0.006813370557279458 0.01232741183635339 9.552286182109727e-08 7.01989267475645 0.05228772901342049 VGS(ph)PLTLTDAQTR ddPTM_A549_PD325901_60min_R1 2 VGSPLTLTDAQTR 13 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60;Q99569-2 PKP4 Plakophilin-4 1 VGS(0.99)PLT(0.009)LT(0.001)DAQTR;VGS(0.985)PLT(0.015)LTDAQTR 212.55 1.8791999999999997e-37 324850000.0 19654.9 21016.4 22118.2 21025.2 24690.1 25711.0 22282.9 25388.0 23524.8 24229.3 24874.0 True False 21650.250978827367 22787.525785062222 23619.27405954142 22323.87885230628 22955.952552220966 25501.618140454877 23130.887953170743 24881.6164234993 22536.13446569567 22699.45786300179 21814.655689277428 0.9924635661093257 1.044597086914509 1.0827250448491388 1.023343167560474 1.0523178948684724 1.1690130939352714 1.060337063423847 1.14059175528172 1.0330731223400822 1.040559988034066 1.0 14.413010082725606 -8.976842726107549 13.674632524003252 1.0145795663020898 1.0719434934636853 0.15705495606940922 0.04775473630424619 1.233685991586597 727.290118038419 0.008365981123810607 0.00865415756770405 1.0547687975389446e-09 8.976842726107549 0.05736392716159555 VGS(ph)PQPSSSGGEK ddPTM_A549_MK2206_60min_R1 4 VGSPQPSSSGGEK 13 0 O94761;V9GYB6 O94761 RECQL4 ATP-dependent DNA helicase Q4 1 VGS(0.997)PQPS(0.002)S(0.001)SGGEK;VGS(0.994)PQPS(0.006)SSGGEK;VGS(0.999)PQPS(0.001)SSGGEK;VGS(1)PQPSSSGGEK 144.68 7.727499999999999e-21 29458600.0 6884.099999999999 6880.300000000001 7027.8 5838.1 8671.599999999999 6521.099999999999 6064.8 6226.2 10064.0 10280.2 10157.8 True False 8045.967779914154 7230.477881862628 8024.447716236611 7268.434762082266 7396.019127199056 7211.158473644155 7166.695655957236 7108.7829169378065 7784.520068905589 7957.895680091023 7635.337918981915 1.053780181740403 0.9469754919277665 1.050961699584683 0.9519467034998536 0.9686564243361255 0.9444452295577875 0.9386219355322041 0.9310371056747782 1.0195383821261923 1.0422453812171442 1.0 12.898476292797673 -8.802147292658855 24.994517820371815 1.009226467765973 0.9720293138278481 0.19244408950848513 0.0413355715730994 201.71309846498477 123850.29787349585 0.006758836814168629 0.007195377667468289 1.5770763074375634e-09 8.802147292658855 -0.03719715393812495 VGS(ph)PQPSSSGGEK ddPTM_A549_PD325901_60min_R1 2 VGSPQPSSSGGEK 13 0 O94761;V9GYB6 O94761 RECQL4 ATP-dependent DNA helicase Q4 1 VGS(0.994)PQPS(0.006)SSGGEK;VGS(0.996)PQPS(0.004)SSGGEK 138.01 1.0778e-08 65765000.0 16866.1 16788.4 15923.6 15561.300000000001 17492.8 14910.3 16309.3 17440.5 15774.7 16755.0 16592.8 True False 18578.334055833428 18203.217386894936 17004.271252385548 16522.486158723514 16264.166074883904 14788.875460294208 16929.95933629141 17092.635545692432 15111.74421699693 15697.08644057382 14551.990790425445 1.27668676563877 1.2509090782872012 1.1685185551088717 1.1354107074885291 1.117659178672996 1.0162785060326331 1.163411905636345 1.174590871576047 1.0384657628384275 1.0786899652865225 1.0 13.828928914607799 -2.00000000000103 0.16387015569157026 0.9774189746686249 2.1585032047275003 0.5970374288399464 0.054721508794211456 21.809248986362242 0.21636013674204893 0.07231229631612211 6.316618523273713 0.009999999999976287 2.00000000000103 1.1810842300588753 VGS(ph)PSGDAASSTPPSTR ddPTM_A549_MK2206_60min_R1 1 VGSPSGDAASSTPPSTR 17 0 F8WEJ1;C9JF34;C9J222;F8WB78;F8WDE4;Q9H980;Q6PIY2;Q9NP87-2;Q9NP87;Q9NP87-3 F8WEJ1 POLM DNA-directed DNA/RNA polymerase mu 1 VGS(0.984)PS(0.016)GDAASSTPPSTR 151.48 7.2442e-17 8997900.0 1328.3 1687.0 1588.0 1192.7 2002.5 1365.4 1301.4 1520.0 2096.5 2104.5 2244.8 True False 1552.4845661829395 1772.8610942404057 1813.2022785770414 1484.9115535423366 1707.9349026957095 1509.8857217208335 1537.8475344055448 1735.4646548047704 1621.6460974225529 1629.0919883612721 1687.3542066717798 0.9200703444744635 1.0506751263193777 1.0745830788862585 0.8800236178456264 1.0121970217886405 0.8948244036437413 0.911395798419154 1.0285123585449707 0.9610584967937272 0.9654712578543737 1.0 10.720547138293282 -6.23101163006999 24.988927442020813 0.9701221619520025 1.018666051586855 0.13792028040923132 0.058219708264944436 1132.395785720633 929984.259382697 0.0077485319214643565 0.02049859565224492 5.874736202304073e-07 6.23101163006999 0.048543889634852566 VGS(ph)PSGDAASSTPPSTR ddPTM_A549_PD325901_60min_R1 1 VGSPSGDAASSTPPSTR 17 0 F8WEJ1;C9JF34;C9J222;F8WB78;F8WDE4;Q9H980;Q6PIY2;Q9NP87-2;Q9NP87;Q9NP87-3 F8WEJ1 POLM DNA-directed DNA/RNA polymerase mu 1 VGS(0.975)PS(0.025)GDAASSTPPSTR 148.33 1.634e-16 6744600.0 2712.6 2842.8 2708.5 2931.1 3505.8 3103.1 3262.4 3091.8 3673.6 3217.9 2863.6 True False 2987.9811550894237 3082.3727328074674 2892.315097533615 3112.1473899889156 3259.564702353424 3077.829382429525 3386.5524172537803 3030.1316235298204 3519.2113672881223 3014.721244829752 2511.39535385603 1.1897693250493744 1.227354636964965 1.1516765343587643 1.239210459321143 1.2979098242531366 1.2255455429205062 1.3484744295851399 1.2065530100138617 1.4012972357716114 1.2004168281194392 1.0 11.294273445947637 -11.010563585842597 1.2982026406132243 1.0002281083042024 1.2678953554270567 0.1990370459309605 0.08950530704152285 0.23776211573592773 0.7144870698784342 0.05567082273077276 0.01267686296428946 9.759698784494331e-12 11.010563585842597 0.2676672471228543 VGS(ph)TENIK ddPTM_A549_MK2206_60min_R1 1 VGSTENIK 8 0 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(0.5)T(0.5)ENIK 125.7 0.0010915999999999999 68956000.0 10662.0 10605.0 9365.1 9030.6 13489.0 12369.0 12252.0 13590.0 15544.0 14241.0 15109.0 True False 12461.484939127078 11144.749202382625 10693.212001953307 11243.09740539904 11504.78596877025 13677.879370122308 14478.029807543215 15516.424117629509 12023.308818667385 11023.948209195947 11357.018312813576 1.097249700219941 0.9813094331113776 0.9415510046231652 0.9899691182776377 1.0130111312570442 1.2043547869153488 1.2748090571632127 1.366241005363448 1.058667731925911 0.9706727510299211 1.0 13.471296496966826 -7.028845505123682 23.68909825122156 1.0890129993983044 0.9972548559431919 0.17858142078437034 0.12095719018885326 732.4722738272457 601535.7245691887 0.020675596575964583 0.03586742826093567 9.357384923107653e-08 7.028845505123682 -0.09175814345511257 VGS(ph)TENIK ddPTM_A549_PD325901_60min_R1 2 VGSTENIK 8 0 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(0.5)T(0.5)ENIK;VGS(0.5)T(0.5)ENIK 139.38 0.0010927 254910000.0 15859.9 14466.4 13647.2 14587.6 15890.3 13660.400000000001 14133.8 14854.6 14880.4 15043.099999999999 14154.2 True False 17469.985372558698 15685.534297835207 14573.381059280318 15488.642921156663 14774.220146559015 13549.154231491184 14671.669493312122 14558.313349791742 14255.028535984908 14093.27609872849 12413.32313086639 1.4073576582501623 1.2636047682374665 1.1740112543306658 1.2477434735138189 1.1901905711148475 1.0915009694543831 1.1819292335047842 1.1727974206674536 1.1483652190233427 1.1353346682553365 1.0 13.59960176597947 -2.0000000000764464 0.0688648297552493 0.7928455845915754 2.1206341735195897 0.5997618934415746 0.062277683294459193 75.38742280396603 0.373166093911046 1.258313479836159 9.71700437756065 0.009999999998239757 2.0000000000764464 1.3277885889280143 VGS(ph)TENIKHQPGGGR ddPTM_A549_MK2206_60min_R1 1 VGSTENIKHQPGGGR 15 1 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(0.904)T(0.096)ENIKHQPGGGR 96.48700000000001 7.1598000000000005e-06 16297000.0 1097.2 1435.1 1403.2 1401.5 1997.8 1538.8 1562.5 1804.6 2583.5 2834.7 2603.6 True False 1282.3805360354747 1508.1404601922973 1602.1948597602677 1744.8675629157267 1703.9262664696569 1701.6347946272278 1846.3860246724028 2060.407576355716 1998.34137500175 2194.339301215349 1957.0542642955475 0.6552605921211259 0.7706175999852313 0.8186767679316171 0.891578529399542 0.8706586718396357 0.8694877938092027 0.9434516243917332 1.0528106521856568 1.0210965589761325 1.1212460181860178 1.0 10.934468043562278 -5.029497510647269 0.3444788080569884 1.0204362414061188 0.34665955207378507 0.8616985638620787 0.04793644374410347 1.6705276192408556 0.12018660289733303 0.012250816525795674 0.48236309005287553 9.343347237986063e-06 5.029497510647269 -0.6737766893323337 VGSAQPS(ph)PPDDLDAGGLAQR ddPTM_A549_MK2206_60min_R1 1 VGSAQPSPPDDLDAGGLAQR 20 0 Q8N3D4;H0YDZ9;E9PIH6;A0A0U1RQH4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 VGS(0.202)AQPS(0.798)PPDDLDAGGLAQR 77.514 0.00029518 1561000.0 859.23 1143.5 753.63 749.92 1207.9 956.17 924.46 928.88 1384.4 1262.9 1672.0 True False 1004.2470178433837 1201.6992657165983 860.5060662493803 933.6504336651881 1030.2195100954543 1057.3512747457219 1092.4224155959346 1060.5515845756952 1070.8356104325226 977.6100128778576 1256.7962551475484 0.7990531589589155 0.9561607625696803 0.6846822328797889 0.7428812982543277 0.8197187936198187 0.8413068310913995 0.8692120231275544 0.8438532341514544 0.8520359652939975 0.77785878886398 1.0 10.295535071641629 -10.629923051380434 0.3416129854749855 1.0642948235471732 0.8021388992588703 0.0 0.09180843161148491 1.723809407643506 0.266320402296885 0.1705340586952797 0.0262855354539052 2.344644204324702e-11 10.629923051380434 -0.2621559242883029 VGSEHS(ph)LLDPPGK ddPTM_A549_MK2206_60min_R1 1 VGSEHSLLDPPGK 13 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 VGS(0.349)EHS(0.651)LLDPPGK 102.28 4.1325e-05 11894000.0 570.1 892.61 964.35 748.92 1384.9 853.07 1176.2 1122.4 1692.9 1440.7 1793.6 True False 666.318942393205 938.0400363544322 1101.1093308222744 932.4054336202962 1181.1830445659364 943.3413011779633 1389.9003150205954 1281.5036372058394 1309.4608530057917 1115.2448693903953 1348.1996191582782 0.49422869797961233 0.6957723641400217 0.8167257394047702 0.6915930106866705 0.8761188089515888 0.6997044708905346 1.0309306539400687 0.9505295944275083 0.9712662979561792 0.8272104913415391 1.0 10.39681840747881 -4.62752599566967 0.28207592470654264 1.0113349017943138 1.7551738622609556e-23 0.6138217146889939 0.09779805211431046 3.835711969055431 0.16743768599544437 0.03239658747479939 1.4289868564070438 2.3576210710438924e-05 4.62752599566967 -1.0113349017943138 VGSEHS(ph)LLDPPGK ddPTM_A549_PD325901_60min_R1 1 VGSEHSLLDPPGK 13 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 VGS(0.37)EHS(0.63)LLDPPGK 118.13 4.3606e-06 22969000.0 1767.1 1757.5 2287.3 2142.0 2477.4 2466.4 2166.7 2087.9 2776.3 2310.4 2440.2 True False 1946.4946911297352 1905.610692946787 2442.5299326522554 2274.3064751650436 2303.3959705660254 2446.314456132314 2249.1549541637332 2046.2551965741372 2659.621765843319 2164.5209497046694 2140.0708697022915 0.909546837297269 0.8904427979115848 1.1413313302993744 1.0627248412018364 1.0763176132043022 1.1430997406514039 1.050972183214015 0.9561623521649052 1.2427727527608947 1.011424892674596 1.0 11.063442857772202 -5.755674696412085 24.880413584015777 1.0991835098017289 0.8999947164374634 0.40794887453999196 0.07785526074655663 96.68326884804722 417271.72143044905 0.013007057355548407 0.047750937618202406 1.755194719214842e-06 5.755674696412085 -0.19918879336426543 VGSHEQPSGAT(ph)LQR ddPTM_A549_PD325901_60min_R1 2 VGSHEQPSGATLQR 14 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 VGSHEQPS(0.056)GAT(0.944)LQR;VGSHEQPS(0.144)GAT(0.856)LQR 88.319 6.8441e-05 26485000.0 4308.1 4465.0 3940.0 4726.5 4424.8 4512.9 3920.5 4629.0 4756.2 4530.6 5907.6 True False 4745.455140544404 4841.28121991886 4207.392093144706 5018.445170339668 4114.01731273131 4476.148438647228 4069.6967728799186 4536.670963619747 4556.313454131033 4244.537142802969 5181.002651361876 0.9159337409906585 0.9344294040548856 0.8120806678295664 0.9686243200474954 0.7940581369225707 0.8639540914866412 0.7855037039616569 0.875635715497509 0.8794269682400881 0.8192501390994757 1.0 12.339015606544937 -10.365788961732232 0.7667740722380083 0.9991883693804335 0.8680750489115187 0.0 0.07544585773625388 0.4588173652200379 0.4964588503158109 0.03362474110597036 0.010482778491221778 4.3073586866294205e-11 10.365788961732232 -0.13111332046891488 VGSLAGSSVFLNRS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 VGSLAGSSVFLNRSPSR 17 1 Q9NRU3;Q9NRU3-2 Q9NRU3 CNNM1 Metal transporter CNNM1 1 VGSLAGSSVFLNRS(0.794)PS(0.206)R;VGSLAGS(0.005)S(0.042)VFLNRS(0.945)PS(0.008)R 109.89 1.7760999999999999e-09 16016700.0 2923.7 3334.0 3512.4 3430.6 3467.7 2596.1000000000004 2924.8 2866.4 4187.4 4733.0 4897.6 True False 3417.1490823978484 3503.686359334625 4010.5111355629724 4271.097154005483 2957.6059236344113 2870.8175788482913 3456.1983007755775 3272.720977981841 3238.9605859037442 3663.8120127887396 3681.3907531164036 0.9282223245400214 0.9517290052322356 1.089401099888122 1.1601857668572335 0.8033936416911768 0.7798187618138773 0.9388295164944949 0.8889903836509037 0.8798198298188994 0.9952249729771872 1.0 11.846035174200374 -6.766358380195336 24.999996154196666 0.9168748639250798 1.0306960434360777 0.3401794688065506 0.08753913774744901 136.8498941335233 695521.2237501061 0.013895437583422775 0.026864125583598 1.712543531808297e-07 6.766358380195336 0.1138211795109979 VGSLAGSSVFLNRS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 VGSLAGSSVFLNRSPSR 17 1 Q9NRU3;Q9NRU3-2 Q9NRU3 CNNM1 Metal transporter CNNM1 1 VGSLAGSSVFLNRS(0.955)PS(0.045)R 183.07 9.6696e-40 15710000.0 3227.7 3197.7 3701.1 3665.6 4726.0 5142.2 4163.4 4204.0 4984.3 4341.6 4107.1 True False 3555.3737278928465 3467.1814013291278 3952.278902522302 3892.0157868183855 4394.062063814903 5100.323628090977 4321.840465299895 4120.147922025798 4774.82720437015 4067.470635057908 3601.9527370519963 0.9870684007927122 0.9625838134030676 1.097260067259247 1.0805293880684814 1.2199110828453583 1.415988493026512 1.1998604037311962 1.1438650706444073 1.3256218370810962 1.1292404237338531 1.0 11.814563535737467 -6.115445692718885 1.6392567854464428 1.181772392851768 0.9729517027302819 0.38839875085028197 0.10558566943724548 0.45336208508706927 2.2509828780907704 0.020467202095719096 0.08819812252336827 7.665743921016751e-07 6.115445692718885 -0.20882069012148619 VGSLPLEKGS(ph)PVTTTK ddPTM_A549_MK2206_60min_R1 1 VGSLPLEKGSPVTTTK 16 1 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 VGSLPLEKGS(0.797)PVT(0.188)T(0.012)T(0.003)K 79.568 9.0622e-05 15340000.0 4759.9 5202.0 5086.8 4578.2 6828.1 5186.5 5178.2 4547.7 7333.7 7250.3 7918.8 True False 5563.2547516179875 5466.7595804615175 5808.184729638346 5699.8592055232075 5823.695535129376 5735.331987479936 6119.011912293527 5192.350401747143 5672.628659512413 5612.452194447959 5952.343412238278 0.9346326927609205 0.9184214017661718 0.9757811885813685 0.9575823857548353 0.9783870203381754 0.9635418507083855 1.0280004846011692 0.8723203689947465 0.9530076251731782 0.942897915282998 1.0 12.539242047808473 -8.569818332641264 0.006001510672389329 1.929660512970869 4.772917254108723e-05 0.0 0.03991122163061604 3659.674471585348 17.87179363878335 2870.682477982111 2874.208106286021 2.692660920701027e-09 8.569818332641264 -1.929612783798328 VGSLPLEKGS(ph)PVTTTK ddPTM_A549_PD325901_60min_R1 1 VGSLPLEKGSPVTTTK 16 1 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 VGSLPLEKGS(0.847)PVT(0.148)T(0.005)TK 138.46 2.6662e-11 28781000.0 10846.0 10401.0 12104.0 10198.0 12254.0 12172.0 12451.0 11776.0 11731.0 11743.0 11556.0 True False 11947.077935596799 11277.528772312673 12925.450227264855 10827.907298661576 11393.321314005041 12072.875267613736 12924.829618448626 11541.118441906709 11237.986865651385 11001.544975927087 10134.685259519572 1.1788306819271803 1.1127655653360937 1.2753676997639272 1.0684009440244684 1.1241909365960057 1.191243236317932 1.2753064636425935 1.1387742338683942 1.1088639240271891 1.0855339553434349 1.0 13.30701366504089 -9.649469602301622 0.7589843152846346 1.0127247669923722 1.171002350368286 0.34651100978768534 0.06466529832407933 0.3382809070616658 0.41529135164564146 0.02354422242424744 0.013579177057707267 2.2414569272302763e-10 9.649469602301622 0.1582775833759138 VGSLPLEKGSPVT(ph)TTK ddPTM_A549_MK2206_60min_R1 1 VGSLPLEKGSPVTTTK 16 1 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 VGSLPLEKGS(0.174)PVT(0.688)T(0.118)T(0.021)K 117.55 5.6857e-08 14353000.0 2757.3 3288.7 3302.1 3500.7 4399.9 3744.4 3389.1 3671.7 5023.3 5058.7 4682.7 True False 3222.664830487253 3456.080782826566 3770.3874333055755 4358.371657152392 3752.6805385122843 4140.629922668441 4004.8556007790307 4192.174719109659 3885.53057056175 3915.936156580265 3519.8563540546793 0.915567144316819 0.9818812005908573 1.0711765066668981 1.2382242963215784 1.066145933537715 1.176363324571091 1.1377894998941247 1.1910073302509934 1.1038889601519775 1.112527263241673 1.0 11.781300838092388 -5.64377036429527 3.0611193850345697 1.0889408739474569 0.9266012379917671 0.44237805518289264 0.06893944681042997 0.2340762089127736 4.145896611981081 0.011574991035019067 0.060090013731817514 2.2710653733405223e-06 5.64377036429527 -0.1623396359556898 VGSLPLEKGSPVT(ph)TTK ddPTM_A549_PD325901_60min_R1 1 VGSLPLEKGSPVTTTK 16 1 Q7Z2K8;Q7Z2K8-2 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 VGSLPLEKGS(0.301)PVT(0.489)T(0.158)T(0.052)K 92.133 3.5351999999999996e-06 28507000.0 9347.3 8979.7 9801.6 9690.3 10487.0 9965.5 10857.0 11881.0 9955.6 10882.0 9664.6 True False 10296.231014881436 9736.450833259894 10466.795517808925 10288.847822731941 9750.429298185963 9884.344272050996 11270.169076178367 11644.0241345358 9537.200753531579 10194.908662866266 8475.91546894712 1.2147632963782302 1.1487196715128825 1.2348867277116808 1.2138922173571445 1.150368869759052 1.1661683399585427 1.3296698294677955 1.3737777561840436 1.125211876932073 1.2028091478987673 1.0 13.049153484318971 -9.362925334026137 1.6145364466955554 1.0360878438141021 1.2228804194061147 0.16578891584204103 0.08723089914612979 0.19070860691336117 1.0222593472512143 0.017474715198956742 0.014920479186504932 4.3358541604779764e-10 9.362925334026137 0.18679257559201257 VGSLT(ph)PPSS(ph)PK ddPTM_A549_MK2206_60min_R1 2 VGSLTPPSSPK 11 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 2 VGS(0.004)LT(0.996)PPS(0.208)S(0.792)PK;VGS(0.01)LT(0.99)PPS(0.03)S(0.97)PK 140.45 1.5186e-09 57625000.0 19717.7 22417.0 18311.4 18028.1 26124.0 19799.8 19009.1 19216.4 27449.0 26711.0 30773.0 True False 23045.56570851868 23557.929549251417 20908.23186645821 22444.985309312153 22281.194206253545 21895.001693956463 22462.8074122241 21940.38354775684 21231.845327045856 20676.966548404816 23131.2148084064 0.996297250248327 1.018447571577172 0.9038968354943334 0.9703331837615007 0.9632522282468304 0.9465564984507139 0.9711036622279179 0.9485184297274009 0.9178871712059727 0.8938988600326493 1.0 14.497553415175137 -5.71877098343141 24.99951096031559 0.9572118736060952 1.0073725241896019 0.3126203684018588 0.03171516606130927 144.15656405485404 84459.6450143514 0.004396099810788428 0.017025783529069787 1.91086064733639e-06 5.71877098343141 0.050160650583506716 VGSLT(ph)PPSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 VGSLTPPSSPK 11 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 2 VGS(0.004)LT(0.996)PPS(0.15)S(0.85)PK;VGS(0.015)LT(0.985)PPS(0.338)S(0.662)PK 167.3 1.5756999999999998e-14 98356000.0 34073.0 35913.0 34808.0 36921.0 42241.0 37957.0 36497.0 37778.0 42113.0 39982.0 44201.0 True False 37532.06587678314 38939.51454668445 37170.280197507826 39201.526316325195 39274.13788353898 37647.89077660323 37885.91330692472 37024.488153732345 40343.13706190237 37457.529696629186 38764.55721322474 0.9682057161220166 1.0045133324365696 0.9588728175857245 1.011272387317541 1.0131455305296353 0.9711936233276371 0.9773338335462718 0.9551118551433173 1.0407222463549537 0.9662829241307662 1.0 15.2424505654325 -8.768647734055584 24.999952799145632 1.0192299484394798 0.9838426266758685 0.0 0.02623192779648171 141.39029791900978 490368.0866158882 0.004006167979502993 0.004307613578710769 1.7035397272333018e-09 8.768647734055584 -0.03538732176361126 VGSPS(ph)GDAASSTPPSTR ddPTM_A549_MK2206_60min_R1 1 VGSPSGDAASSTPPSTR 17 0 F8WEJ1;C9JF34;C9J222;F8WB78;F8WDE4;Q9H980;Q6PIY2;Q9NP87-2;Q9NP87;Q9NP87-3 F8WEJ1 POLM DNA-directed DNA/RNA polymerase mu 1 VGS(0.368)PS(0.615)GDAAS(0.014)S(0.003)TPPSTR 121.79 7.109800000000001e-10 8284200.0 1452.4 1109.6 1239.4 1260.5 1548.4 1077.2 956.64 1281.3 1701.9 1296.5 1548.2 True False 1697.5296122292423 1166.073900515207 1415.165556718127 1569.322556585995 1320.6324111530778 1191.1885890125102 1130.4491050512688 1462.9281988166792 1316.4223673758381 1003.6197495416435 1163.7392118537289 1.4586855843116557 1.0020061957504716 1.21605041946116 1.348517383105283 1.1348181772181007 1.023587223734652 0.9713938428271812 1.2570928124750305 1.1312004905969433 0.8624094980377692 1.0 10.184552078373317 -2.0000000000000004 0.10594569359268602 0.9520294355774933 1.8845847718785576 0.34263722804070496 0.13843363982772508 106.99991689503047 0.770440887702971 0.6905482636920087 14.620316935325818 0.00999999999999999 2.0000000000000004 0.9325553363010642 VGSPS(ph)GDAASSTPPSTR ddPTM_A549_PD325901_60min_R1 1 VGSPSGDAASSTPPSTR 17 0 F8WEJ1;C9JF34;C9J222;F8WB78;F8WDE4;Q9H980;Q6PIY2;Q9NP87-2;Q9NP87;Q9NP87-3 F8WEJ1 POLM DNA-directed DNA/RNA polymerase mu 1 VGS(0.412)PS(0.588)GDAASSTPPSTR 124.5 3.5243999999999997e-10 8565500.0 3967.2 3336.7 3257.7 3382.9 4087.0 3551.7 2829.3 3810.3 3708.4 3629.7 4168.0 True False 4369.947223501721 3617.8954191496687 3478.7871121415005 3591.8540498766683 3799.9432193845746 3522.7761327623803 2936.970559752366 3734.300577377476 3552.5488443083827 3400.5201225515234 3655.3624231289014 1.195489452933959 0.9897501260771944 0.9516941713166005 0.9826259708612227 1.039553067389667 0.9637282777960412 0.8034690462343788 1.0215951648868256 0.9718732188715469 0.9302826174048047 1.0 11.835798738754782 -5.26310826783491 4.8529091264992825 0.9763674965981076 1.2070312976252837 0.5441510743631464 0.05988395749621548 0.09914263630747935 6.800268321086815 0.007742251258795196 0.07668906958131053 5.456218228502196e-06 5.26310826783491 0.2306638010271761 VGST(ph)ENIK ddPTM_A549_MK2206_60min_R1 1 VGSTENIK 8 0 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(0.388)T(0.612)ENIK 81.95 0.0038436 64641000.0 4480.9 5548.4 4565.3 4497.1 6574.3 5127.0 5153.3 5512.3 8016.6 7589.3 7802.6 True False 5237.166372513088 5830.789860867491 5212.728187901618 5598.889701882495 5607.229178922547 5669.535736972842 6089.587904604343 6293.685405710752 6200.8528998796255 5874.871859002236 5864.999079195128 0.8929526333756562 0.994167225285851 0.8887858493265062 0.9546275500269725 0.9560494559688908 0.9666729116947943 1.0382930708729174 1.0730923092616163 1.057264087538542 1.0016833386798185 1.0 12.517915166412763 -7.603838804441772 2.8118139789194143 1.0327655373765336 0.9392125262333303 0.6507274224977044 0.03391459406894544 0.13733351856438009 2.203931610305312 0.005517456082961744 0.008570249316166446 2.489781270175297e-08 7.603838804441772 -0.09355301114320336 VGST(ph)ENIKHQPGGGR ddPTM_A549_PD325901_60min_R1 1 VGSTENIKHQPGGGR 15 1 E7EVA0;H7C4C5;H0Y2V1;F8W9U4;P27816;P27816-6;P27816-2;P27816-5 E7EVA0;P27816 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(0.387)T(0.613)ENIKHQPGGGR 66.202 0.0013658 27752000.0 6375.3 7985.9 6899.4 8742.0 7886.6 9227.1 8689.2 8322.1 10491.0 8265.8 9024.1 True False 7022.5157627521985 8658.899819518487 7367.634773462584 9281.973485477496 7332.672423292973 9151.957556835252 9019.87226091269 8156.109186938844 10050.099753435232 7743.895977349745 7914.192908483092 0.8873318914459213 1.0940976445288761 0.9309394980207444 1.1728262872551796 0.9265218207447538 1.1563980891880232 1.1397084156546702 1.0305673972385037 1.2698830910051102 0.9784820848944928 1.0 12.950226516098553 -7.280412969227766 24.64849049082251 1.1251706921401554 1.0129452625005693 0.12199883108130727 0.10887171092303143 923.4294649710986 1199619.886699709 0.01751313845757141 0.028027009702425033 5.2430865971314917e-08 7.280412969227766 -0.11222542963958615 VGT(ph)PSQGPFLR ddPTM_A549_MK2206_60min_R1 1 VGTPSQGPFLR 11 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 VGT(0.816)PS(0.184)QGPFLR 61.233000000000004 0.0083688 4262300.0 1034.1 1216.9 1363.0 1061.3 1474.2 1129.3 1138.3 1119.8 1879.3 1615.7 1586.2 True False 1208.6307986823595 1278.8350121998515 1556.293895277399 1321.318547643568 1257.3471328609317 1248.8017764313288 1345.1143756061404 1278.535079243673 1453.6415506254252 1250.712247847616 1192.302763107081 1.013694538065758 1.0725757347632674 1.3052841471421028 1.1082072343775153 1.054553567907826 1.0473864651433116 1.1281651080811386 1.0723241770503615 1.2191882763378896 1.0489888026329175 1.0 10.219534912551502 -11.13275626821977 1.51226731056147 1.0003167297632063 1.128036437846552 0.12422932709177148 0.08154957338524489 0.4834362534258063 1.9880349634348637 0.06103772980792078 0.013263664742016922 7.366203825688312e-12 11.13275626821977 0.12771970808334565 VGT(ph)PSQGPFLR ddPTM_A549_PD325901_60min_R1 2 VGTPSQGPFLR 11 0 H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03;H0YAU4 H3BLZ3 WWC1 Protein KIBRA 1 VGT(0.941)PS(0.059)QGPFLR;VGT(0.979)PS(0.021)QGPFLR 117.95 1.7495e-05 18572700.0 6935.3 7116.2 7434.5 8059.1 8335.2 8524.8 7672.9 7882.5 8473.8 8081.2 7485.4 True False 7639.366550501982 7715.907148306071 7939.049877280281 8556.892303455927 7749.764306878957 8455.376855188431 7964.896408271986 7725.277353798377 8117.675654433279 7570.951652853782 6564.743253860147 1.1636961652704305 1.175355508955971 1.2093465913708088 1.303461837357367 1.1805129320666126 1.2879981026244354 1.2132837645384733 1.1767828618820426 1.2365564562879119 1.153274600404513 1.0 12.68052287329344 -10.741782077663387 0.7174803635984088 0.9796871381223984 1.2201213419292327 0.3384595525097833 0.06212301021695727 0.31287642272715854 0.24657062540152125 0.04560012056794637 0.008477354381494204 1.8122492234824445e-11 10.741782077663387 0.24043420380683433 VGTEGLVDS(ph)FSQGLER ddPTM_A549_MK2206_60min_R1 1 VGTEGLVDSFSQGLER 16 0 T1ECW5;O75170-6;O75170-2;O75170-4;O75170-3;O75170-5;O75170 T1ECW5 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 1 VGTEGLVDS(0.964)FS(0.036)QGLER 83.96600000000001 9.9269e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VGTEGLVDS(ph)FSQGLER ddPTM_A549_PD325901_60min_R1 2 VGTEGLVDSFSQGLER 16 0 T1ECW5;O75170-6;O75170-2;O75170-4;O75170-3;O75170-5;O75170 T1ECW5 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 1 VGTEGLVDS(0.991)FS(0.009)QGLER;VGTEGLVDS(0.999)FS(0.001)QGLER 137.52 1.3830999999999999e-10 7942200.0 2770.1000000000004 3093.8 3049.6 2906.8 3154.6 2672.8999999999996 2525.6 2866.2 3301.8 2913.8999999999996 3170.6 True False 3051.318512760163 3354.525383692044 3256.564194734541 3086.3464341782183 2933.031778779197 2651.13278859717 2621.7130900613483 2809.0313925095993 3163.036828318795 2729.9158567107133 2780.636300089372 1.0973454215001404 1.2063876831300184 1.1711579089397173 1.1099425099496185 1.0548059732532897 0.9534266629950707 0.9428464592716006 1.0102117247118274 1.1375226699792174 0.9817594111905147 1.0 11.441199340971586 -6.583809758242448 2.8834810443547116 1.0434896856176288 1.1619257550953614 0.5028276219575437 0.06050308652520975 0.235551811455668 3.958452882070795 0.01071016080846259 0.024911087491807374 2.607295419997743e-07 6.583809758242448 0.11843606947773266 VGTHQS(ph)L ddPTM_A549_MK2206_60min_R1 2 VGTHQSL 7 0 Q8WVV5-5;Q7KYR7-3;Q8WVV5-4;Q7KYR7-5;Q8WVV5;Q7KYR7 Q8WVV5-5 BTN2A2;BTN2A1 Butyrophilin subfamily 2 member A2;Butyrophilin subfamily 2 member A1 1 VGTHQS(1)L;VGTHQS(1)L 71.37899999999999 0.020558 33686000.0 4762.1 5842.7 5833.1 4806.7 7002.1 5896.8 4986.2 5404.9 8343.9 8401.9 8557.1 True False 5565.826057833151 6140.0684738105565 6660.321291667343 5984.341715780961 5972.10036562578 6520.795462020956 5892.127997581779 6171.061126812043 6454.01997247033 6503.904954627023 6432.135906054477 0.8653153694395852 0.9545924656273196 1.0354758339913306 0.9303817274986348 0.9284785727248591 1.013783843696932 0.9160453205031944 0.9594108733000046 1.0034023016204079 1.011157887460834 1.0 12.651082174530824 -2.0000000000000004 0.16503794620870624 1.0111391931358698 0.6525632284649727 0.2601547332054257 0.042757378879870175 58.2693410268414 0.5806624964617456 0.057624757291481574 5.170083446572306 0.00999999999999999 2.0000000000000004 -0.35857596467089703 VGTHQS(ph)L ddPTM_A549_PD325901_60min_R1 2 VGTHQSL 7 0 Q8WVV5-5;Q7KYR7-3;Q8WVV5-4;Q7KYR7-5;Q8WVV5;Q7KYR7 Q8WVV5-5 BTN2A2;BTN2A1 Butyrophilin subfamily 2 member A2;Butyrophilin subfamily 2 member A1 1 VGTHQS(1)L;VGTHQS(1)L 60.91 0.028428 45158000.0 7646.7 7688.0 8244.5 8436.1 9459.4 9258.5 8983.8 9168.900000000001 10031.5 9894.4 10709.3 True False 8422.987354796982 8335.894741038343 8804.021348205975 8957.178737226805 8795.00437715842 9183.101845645893 9325.683425123985 8986.0190966371 9609.910940480937 9269.66589541113 9392.12399184606 0.8968139008928704 0.8875409596674084 0.9373834242232475 0.9536904266812426 0.9364233675784052 0.9777449545617548 0.9929259274281562 0.9567611228768351 1.0231882531389016 0.986961618421856 1.0 13.19723573923874 -6.457047110981011 0.43929815549573253 1.0112575296290327 0.8642785072556006 0.7814474743508878 0.018947355930662102 0.5965467782841357 0.14534200683428758 0.004824357185342638 0.038426197487478365 3.4910244382385277e-07 6.457047110981011 -0.14697902237343208 VGVEEPS(ph)EEDQNEHHWQYFR ddPTM_A549_PD325901_60min_R1 2 VGVEEPSEEDQNEHHWQYFR 20 0 A0A087WXD1;Q96T83 A0A087WXD1 SLC9A7 Sodium/hydrogen exchanger;Sodium/hydrogen exchanger 7 1 VGVEEPS(1)EEDQNEHHWQYFR;VGVEEPS(1)EEDQNEHHWQYFR 137.12 3.7466e-17 40841000.0 1721.67 1807.73 1541.58 1624.79 1851.8899999999999 1613.21 1603.51 1647.63 2058.64 1872.55 2012.8400000000001 True False 1896.4526709735344 1960.073751328986 1646.200889073607 1725.1495881341782 1721.8196350736732 1600.0725526180713 1664.5324505243407 1614.7667271092691 1972.1225199134424 1754.3168734286178 1765.2734404440453 1.074310997675517 1.1103513520465926 0.9325472481246383 0.977270460547022 0.9753840938322612 0.9064162616164335 0.9429317931082882 0.9147402833541092 1.1171767924052407 0.9937932748749274 1.0 10.785675958593517 -8.762179190025261 24.999992147679944 1.0553334821054468 0.9782252925221984 0.11144818326673267 0.06734669323418657 24.983902382889376 844270.3715085888 0.012857096788944531 0.014084837225153697 1.729102783720095e-09 8.762179190025261 -0.07710818958324839 VGVNGFGR ddPTM_A549_MK2206_60min_R1 2 VGVNGFGR 8 0 P04406 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 72.234 0.015931999999999998 1950200.0 555.8299999999999 479.35 426.44 501.44 550.22 658.5899999999999 521.33 601.6600000000001 597.61 604.03 708.51 False True 649.6405152612084 503.7468675306096 486.9156043302225 624.2928225104966 469.28336687202693 728.281556663339 616.0489127951766 686.947147506473 462.25228918707 467.5792034829457 532.5674131187734 1.2198277612534383 0.9458837606691188 0.9142797556440623 1.172232485751558 0.8811717640098403 1.3674917742308752 1.1567529248316686 1.2898782963148927 0.8679695336221751 0.8779718622751445 1.0 9.056820345003247 -8.788113261137463 24.999472273680333 0.9376522747324953 1.109345694651816 0.26255946709547084 0.14978122738770008 247.88644108143484 232324.61843190907 0.026081367649380377 0.02776944158942531 1.6288711783787896e-09 8.788113261137463 0.17169341991932074 VGVNGFGR ddPTM_A549_PD325901_60min_R1 1 VGVNGFGR 8 0 P04406 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 148.54 0.0020055999999999997 107320000.0 5484.7 5800.4 6589.9 6407.6 7043.8 6861.1 6780.3 7896.3 7334.9 8341.9 8348.1 False True 6041.5027063772595 6289.220064505566 7037.130242287893 6803.382899284561 6549.0677877908165 6805.225476390459 7038.328026822521 7738.802101972484 7026.639660801844 7815.1910103624405 7321.336622966023 0.8251912208797911 0.8590262117954187 0.9611810799975221 0.9292542126724903 0.8945180538820322 0.9295058849013178 0.9613446818910438 1.0570203912898812 0.9597482020919847 1.0674541293248645 1.0 12.837891343456905 -2.3894183313882813 0.2786688167114157 0.9914424418281496 2.8418046071500637e-10 0.6334310525181602 0.043151586741213145 17.615617560333227 0.2669499943681971 0.014432673727156514 8.289423095550594 0.004079262646558308 2.3894183313882813 -0.9914424415439691 VGVSSKPDSS(ph)PVLSPGNK ddPTM_A549_MK2206_60min_R1 2 VGVSSKPDSSPVLSPGNK 18 1 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 VGVSSKPDS(0.022)S(0.978)PVLSPGNK;VGVSSKPDS(0.024)S(0.976)PVLSPGNK 227.6 1.0327999999999997e-64 248200000.0 22524.0 25327.0 26062.0 22729.1 33196.0 26039.0 25236.0 24690.0 34889.0 35463.0 36864.0 True False 26325.500541070935 26616.03611963646 29757.98349135697 28297.730520348083 28312.91237447528 28794.429696710697 29821.054539924957 28189.883109953815 26986.69720628449 27451.883669876832 27709.65140535837 0.9500480592830636 0.9605330550816518 1.0739212506153182 1.021222898346386 1.0217707888234298 1.0391480309688255 1.0761973907098048 1.0173308461218167 0.9739096609878651 0.990697546796576 1.0 14.758100941003057 -8.667057539460753 6.798516862319403 0.9877276634268498 1.0226906615745004 0.12450898655677523 0.037248363782974483 0.3206845378699328 19.783355895322245 0.006581121734671994 0.007455465763266515 2.15249653263241e-09 8.667057539460753 0.03496299814765058 VGVSSKPDSS(ph)PVLSPGNK ddPTM_A549_PD325901_60min_R1 4 VGVSSKPDSSPVLSPGNK 18 1 Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8 Q8N4C8-5;Q8N4C8-4 MINK1 Misshapen-like kinase 1 1 VGVSSKPDS(0.055)S(0.945)PVLSPGNK;VGVSSKPDS(0.025)S(0.975)PVLSPGNK;VGVSSKPDS(0.024)S(0.976)PVLSPGNK;VGVSSKPDS(0.029)S(0.971)PVLSPGNK 222.48 1.7826999999999998e-64 439752000.0 56017.3 50134.4 57025.3 55201.3 64873.0 60468.4 63609.8 60991.1 61917.8 55206.2 62774.7 True False 61704.13505824333 54359.40183469211 60895.37977898597 58610.958929751665 60316.54427970039 59975.96539863415 66030.50574761814 59774.58466390768 59315.6101909496 51720.47111045094 55053.80986160985 1.1207968206623768 0.9873867398339317 1.1061065516094202 1.064612223515203 1.0955925562884679 1.0894062654228154 1.1993812220008149 1.0857483762552411 1.077411542272056 0.9394530776428006 1.0 15.748554784906068 -10.183475922291764 0.8379837117020915 1.0046487745284494 1.0911951443573156 0.4236186223950926 0.051569077630520474 0.49981139160568044 0.6880916293242543 0.02323534410828356 0.009360124127055744 6.554266223152563e-11 10.183475922291764 0.08654636982886621 VHADLVISKPVS(ph)KSPER ddPTM_A549_MK2206_60min_R1 2 VHADLVISKPVSKSPER 17 2 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 VHADLVIS(0.114)KPVS(0.443)KS(0.443)PER;VHADLVIS(0.062)KPVS(0.469)KS(0.469)PER 45.047 0.0089605 11810800.0 3871.3999999999996 4836.4 4872.4 4211.0 6506.6 5250.200000000001 5530.9 5462.799999999999 6203.1 6157.7 6133.9 True False 4524.797673357398 5082.55210206538 5563.379585729713 5242.695189038973 5549.4877592409 5805.772679199301 6535.7929368707755 6237.168629123362 4798.107754315212 4766.671293291616 4610.683342972214 0.9813724640739585 1.102342478108458 1.2066279924015246 1.13707552634906 1.20361502762918 1.2592000463551005 1.4175323809284994 1.3527644744092655 1.0406500289439045 1.0338318506642112 1.0 12.170764870990777 -8.89991394213038 8.632534683175997 1.017871471061476 1.2101494611414942 0.3502234469704706 0.11107474404234811 0.21371993138079864 16.671503964730107 0.02081654048086888 0.022119217094962715 1.2591748995917409e-09 8.89991394213038 0.19227799008001822 VHAPGLNLS(ph)GVGGK ddPTM_A549_MK2206_60min_R1 2 VHAPGLNLSGVGGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VHAPGLNLS(1)GVGGK;VHAPGLNLS(1)GVGGK 91.65700000000001 1.9761e-05 11835100.0 2633.8 3320.1 3243.3 2783.3 4404.8 2827.8 3003.0 3307.7 4649.5 4226.200000000001 4548.5 True False 3078.3210497723608 3489.078908706322 3703.2487091365997 3465.208624947084 3756.8597550032764 3127.0359190582776 3548.606228538381 3776.576604406411 3596.395673725812 3271.4984847766254 3418.981917786257 0.9003618983061281 1.0205022993995394 1.0831436954584426 1.0135206059208286 1.098824107685188 0.914610253652055 1.0379131314142938 1.1045909850414453 1.051890814343478 0.9568633480503679 1.0 11.739351077369317 VHAPGLNLS(ph)GVGGK ddPTM_A549_PD325901_60min_R1 4 VHAPGLNLSGVGGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VHAPGLNLS(1)GVGGK;VHAPGLNLS(1)GVGGK;VHAPGLNLS(1)GVGGK;VHAPGLNLS(1)GVGGK 108.34 4.7454e-06 30791000.0 6178.4 6913.5 7404.0 6755.599999999999 8254.9 7790.2 7544.1 8205.4 8683.5 7247.900000000001 7653.299999999999 True False 6805.626619702315 7496.124907930356 7906.47996386888 7172.878068919216 7675.1043018589935 7726.759194032577 7831.194853789927 8041.73685998823 8318.56269268467 6790.266357065651 6711.9926182659365 1.0139502539352567 1.1168255590047123 1.1779631494755045 1.068665965066623 1.143491171455114 1.1511870816134493 1.1667466427895357 1.1981146758271968 1.2393581408368408 1.0116617736716071 1.0 12.712525413789498 -5.273654390789942 4.54163470063912 1.1297336260964792 1.007525689474611 0.17500286803213505 0.0710738141497769 0.3028475091017813 15.835905421897687 0.012142913959330249 0.11521749974998144 5.3253187668803385e-06 5.273654390789942 -0.12220793662186824 VHAYFAPVT(ph)PPPSVGGSR ddPTM_A549_MK2206_60min_R1 4 VHAYFAPVTPPPSVGGSR 18 0 J3KTA1;Q96IG2-2;Q96IG2 J3KTA1 FBXL20 F-box/LRR-repeat protein 20 1 VHAYFAPVT(0.974)PPPS(0.011)VGGS(0.015)R;VHAY(0.001)FAPVT(0.976)PPPS(0.01)VGGS(0.014)R;VHAYFAPVT(1)PPPSVGGSR;VHAYFAPVT(0.998)PPPS(0.001)VGGS(0.001)R 77.221 0.0003682 56675500.0 6678.15 7878.500000000001 8764.58 9281.4 11393.830000000002 8128.4400000000005 9277.779999999999 7978.13 11931.8 10929.9 12420.8 True False 7805.258454908225 8279.481998205707 10007.529236001743 11555.343416657877 9717.812700315339 8988.586125578218 10963.432532470475 9109.054359498412 9229.266351169292 8460.827998854777 9336.372563359246 0.8360054616436469 0.8867985871406499 1.0718862350541218 1.2376694843998644 1.0408552823237862 0.9627492973935164 1.1742711056215402 0.975652406508182 0.9885280700332917 0.9062221908388105 1.0 13.188646416892697 -5.647797733637593 5.139407298987476 1.0260645757236289 0.8490605607374463 0.35627858616507524 0.09170818514924906 0.1639249117067267 6.5376356205343615 0.01210653401055189 0.049697887825226675 2.250102314390256e-06 5.647797733637593 -0.17700401498618257 VHAYFAPVT(ph)PPPSVGGSR ddPTM_A549_PD325901_60min_R1 3 VHAYFAPVTPPPSVGGSR 18 0 J3KTA1;Q96IG2-2;Q96IG2 J3KTA1 FBXL20 F-box/LRR-repeat protein 20 1 VHAY(0.001)FAPVT(0.985)PPPS(0.006)VGGS(0.009)R;VHAYFAPVT(0.987)PPPS(0.006)VGGS(0.008)R;VHAY(0.001)FAPVT(0.999)PPPSVGGSR 65.598 0.0019652999999999997 104560800.0 5176.54 5358.4 6260.3 6683.0 7665.3 7181.9 6265.3 6576.1 7524.0 6507.4 7364.799999999999 True False 5702.058530032662 5809.971173306434 6685.161604242077 7095.793731805777 7126.915771849419 7123.412987551358 6503.729420003712 6444.934526649351 7207.792445414807 6096.52165344017 6458.9762893137595 0.882811497460766 0.8995188886076125 1.0350187560376305 1.0985941756042081 1.1034125924321398 1.1028702798207968 1.0069288272143058 0.9978260080180755 1.1159341856293772 0.9438835785055809 1.0 12.657089808812799 -5.775963088247756 4.069286873951097 1.0578915075363515 0.8859110124138212 0.5438023019733496 0.05369652110628871 0.09797831638598965 3.5959385168224 0.007133765501881833 0.02721221932043254 1.6750852395757024e-06 5.775963088247756 -0.17198049512253033 VHAYFAPVT(ph)PPTAVAGSGQR ddPTM_A549_MK2206_60min_R1 2 VHAYFAPVTPPTAVAGSGQR 20 0 Q9UKC9-2;Q9UKC9 Q9UKC9-2 FBXL2 F-box/LRR-repeat protein 2 1 VHAYFAPVT(0.941)PPT(0.054)AVAGS(0.004)GQR;VHAY(0.001)FAPVT(0.967)PPT(0.03)AVAGS(0.002)GQR 52.358999999999995 0.010409999999999999 16284600.0 2816.1 3815.6 4395.299999999999 4041.9 4749.9 3168.8 3795.9 3994.0 5429.1 5367.0 5491.2 True False 3291.388832965277 4009.797742254708 5018.619631630775 5032.165681447786 4051.196002154482 3504.1203127207973 4485.565895074543 4560.161731112009 4199.417518491193 4154.590972456616 4127.583490589842 0.797413023980995 0.971463751465315 1.2158735596923327 1.2191553951410627 0.9814934116754973 0.848952012893154 1.0867292945862481 1.1048018147926915 1.0174034100255318 1.0065431703388548 1.0 12.011081682172929 VHAYFAPVT(ph)PPTAVAGSGQR ddPTM_A549_PD325901_60min_R1 2 VHAYFAPVTPPTAVAGSGQR 20 0 Q9UKC9-2;Q9UKC9 Q9UKC9-2 FBXL2 F-box/LRR-repeat protein 2 1 VHAYFAPVT(0.998)PPT(0.001)AVAGS(0.001)GQR;VHAYFAPVT(0.999)PPT(0.001)AVAGSGQR 74.579 0.00034449999999999997 15359400.0 4057.1000000000004 3715.6 3684.5 4446.7 4353.5 4220.5 3957.8 4661.2 4557.9 3890.2 4534.700000000001 True False 4468.973805320837 4028.7266518993333 3934.552326698391 4721.362559811577 4047.7251787596647 4186.129647302315 4108.416244791261 4568.228709359339 4366.347313524208 3644.5721080943163 3976.960647831729 1.1237158727626226 1.0130164737978555 0.9893364996818715 1.1871785963951396 1.0177936211077465 1.052595189641775 1.0330542865771637 1.14867334979791 1.0979106157122214 0.9164214662474386 1.0 11.957450571356658 -10.878633578871685 1.1790632802465206 1.000781165118756 1.0733745094207812 0.27934497057955576 0.0642069543462008 0.6522865883159402 1.6375944286165436 0.03743983571078945 0.009437808687255727 1.3224109026450274e-11 10.878633578871685 0.07259334430202524 VHDRS(ph)EEEEEEEEEEEEEQPR ddPTM_A549_MK2206_60min_R1 6 VHDRSEEEEEEEEEEEEEQPR 21 1 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR 261.6 3.5325999999999992e-112 877366000.0 3883.15 4003.43 3704.79 2218.21 5729.82 4393.53 4301.860000000001 4292.81 6242.2300000000005 5402.96 5127.780000000001 True False 4538.53078609748 4207.187486967912 4230.184930509723 2761.671549579229 4886.9710682466575 4858.450428410822 5083.452277822222 4901.328963679257 4828.374871792984 4182.427583481311 3854.4107064715877 1.177490187664031 1.0915254775273453 1.0974920040065288 0.7164964400245049 1.2678905909122222 1.2604911096405587 1.3188662716422677 1.2716156468354254 1.25268821604457 1.085101693096426 1.0 11.91229459075875 VHDRS(ph)EEEEEEEEEEEEEQPR ddPTM_A549_PD325901_60min_R1 7 VHDRSEEEEEEEEEEEEEQPR 21 1 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR 266.99 2.1110999999999996e-112 939196700.0 4484.12 4798.639999999999 4189.8 4466.47 5463.339999999999 4890.01 4471.59 4963.26 5652.73 6047.639999999999 5863.56 True False 4939.3445613653275 5203.038233628544 4474.145023314131 4742.353707810646 5079.613845899812 4850.187379837648 4641.758804397939 4864.263885697856 5415.165415998092 5665.790978303299 5142.3792921693175 0.9605173560197775 1.011795890192619 0.8700534847997782 0.9222100195977725 0.987794473588309 0.9431796264471173 0.9026480818842533 0.9459169791510772 1.053046675153691 1.101783951823822 1.0 12.328220309215395 -8.746704566581117 23.70428851802089 1.0250498134959622 0.9423342791181706 0.520623241116951 0.04445596359406982 81.07824444414943 130432.36692135387 0.00681819197529235 0.007712220547619967 1.7918243470227655e-09 8.746704566581117 -0.08271553437779167 VHDRS(ph)EEEEEEEEEEEEEQPRR ddPTM_A549_MK2206_60min_R1 2 VHDRSEEEEEEEEEEEEEQPRR 22 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 VHDRS(1)EEEEEEEEEEEEEQPRR;VHDRS(1)EEEEEEEEEEEEEQPRR 215.59 5.090099999999999e-74 84936000.0 255.3 505.46 593.89 81.189 793.1600000000001 915.01 349.03 577.9 1107.49 777.1099999999999 829.77 True False 298.38839851426957 531.1857550057824 678.112532257002 101.08030864471267 676.4872146926988 1011.8357508655192 412.4442330825014 659.8190947445245 856.645283298118 601.5603112736652 623.7152085130269 0.47840487844707963 0.8516479119888064 1.0872150029396612 0.1620616384931417 1.0846091380479295 1.622272051498943 0.6612701236928185 1.0578852106517833 1.3734558202298928 0.9644791453904414 1.0 9.284743627430045 -6.971696399748757 24.99103986901601 1.1634505347519641 0.6827198806765291 0.3267225756370067 0.314676877151738 181.60164056202558 160346.79621252543 0.04409221924537036 0.08332547737125683 1.0673420023674501e-07 6.971696399748757 -0.480730654075435 VHDRS(ph)EEEEEEEEEEEEEQPRR ddPTM_A549_PD325901_60min_R1 2 VHDRSEEEEEEEEEEEEEQPRR 22 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 VHDRS(1)EEEEEEEEEEEEEQPRR;VHDRS(1)EEEEEEEEEEEEEQPRR 364.88 5.722399999999997e-269 99859000.0 702.28 1241.88 1117.19 1193.85 1019.7900000000001 847.1300000000001 795.3 1371.58 1220.47 669.25 1182.08 True False 773.5749486087892 1346.5375859782393 1193.0092316092216 1267.5914030699284 948.1634684845113 840.2312541450563 825.5655767048582 1344.2227609163044 1169.1778901987518 626.9934407850801 1036.6916538225082 0.7461957909629634 1.2988795472725778 1.1507850258177892 1.222727508604938 0.9146050949560806 0.8104929281980233 0.7963463134489585 1.2966466508723804 1.1277971476742752 0.6048022461386842 1.0 10.017771137683988 -14.999842529666726 0.00416998691537792 0.6275578577755622 1.4510846693857777 0.0 0.23339228253437003 1395781.1900057003 453.4870579764198 47606.03609155399 42111.544021607006 1.0003626545852661e-15 14.999842529666726 0.8235268116102156 VHEPEPT(ph)PTVETR ddPTM_A549_MK2206_60min_R1 4 VHEPEPTPTVETR 13 0 P36021 P36021 SLC16A2 Monocarboxylate transporter 8 1 VHEPEPT(0.996)PT(0.004)VETR;VHEPEPT(0.974)PT(0.021)VET(0.005)R;VHEPEPT(1)PTVETR;VHEPEPT(0.903)PT(0.014)VET(0.083)R 103.88 0.00010555 14787790.0 1309.58 1421.65 1445.8600000000001 1123.81 1999.46 1249.41 1336.6999999999998 1703.4499999999998 2016.53 1596.07 2844.8199999999997 True False 1530.6050878429971 1494.0059126418926 1650.9046892338806 1399.1435004497487 1705.342082668645 1381.6217369087651 1579.5610874749432 1944.919254096833 1559.7891747367053 1235.5166784812434 2138.372680962228 0.7157803227986682 0.6986648894006715 0.7720378696995905 0.6543029252600441 0.7974952625663327 0.6461089543507734 0.7386743674466371 0.9095324081776313 0.7294281247714168 0.5777836059546383 1.0 11.06229759614917 -13.165774592754714 0.2525842441608475 1.5947242898949823 0.7056879827328919 0.0 0.14392270384053593 7.12194918709575 0.20525687003207113 2.2249930236394464 0.034507094832100564 6.826929330564262e-14 13.165774592754714 -0.8890363071620904 VHEPEPT(ph)PTVETR ddPTM_A549_PD325901_60min_R1 3 VHEPEPTPTVETR 13 0 P36021 P36021 SLC16A2 Monocarboxylate transporter 8 1 VHEPEPT(0.998)PT(0.002)VETR;VHEPEPT(0.952)PT(0.037)VET(0.011)R;VHEPEPT(0.997)PT(0.003)VETR 91.65700000000001 0.00016125 18292500.0 2821.8900000000003 2796.99 2413.7200000000003 2173.24 2425.1 2518.79 2039.6100000000001 2620.16 2661.8900000000003 2838.88 2809.7200000000003 True False 3108.366195434379 3032.70216333726 2577.5295540774705 2307.476099013853 2254.76934214082 2498.277809342162 2117.2284746674163 2567.898853324243 2550.0200202718265 2659.632632313709 2464.1422522825674 1.2614394288946016 1.2307333963889577 1.0460149172353468 0.9364216278002649 0.9150321334136442 1.0138529165789736 0.8592151985974834 1.0421065792551403 1.0348509782297306 1.0793340481256941 1.0 11.266869828332378 -5.792154939299759 3.4704303880175784 0.995502648664466 1.2561848587247886 0.7312722171011425 0.06019108310405458 0.0824079849015763 2.027258820117085 0.008006563528793623 0.031816376478234175 1.6137827195036399e-06 5.792154939299759 0.26068221006032255 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(ph)SPR ddPTM_A549_MK2206_60min_R1 4 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR 40 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(0.551)S(0.449)PR;VHEPPREDAAPTKPAPPAPPPPQNLQPES(0.001)DAPQQPGS(0.595)S(0.405)PR;VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(0.546)S(0.454)PR;VHEPPREDAAPTKPAPPAPPPPQNLQPES(0.002)DAPQQPGS(0.611)S(0.387)PR 128.21 4.9716e-30 375183000.0 5086.82 6160.710000000001 4745.22 4081.0499999999997 7121.099999999999 4871.05 4990.15 5253.789999999999 8002.120000000001 7769.02 8447.41 True False 5945.350855191369 6474.26382448003 5418.163549338386 5080.907433205299 6073.595623264126 5386.501277858696 5896.795661452153 5998.53082155708 6189.652596759818 6013.9929861812725 6349.684960344464 0.9363221785524364 1.0196196921443497 0.8532964364651653 0.8001826019616671 0.9565192070465554 0.8483100045906031 0.928675311968904 0.9446973919209475 0.9747968025840507 0.9471324992878102 1.0 12.632469298999851 -8.57257051572042 1.4421058378034133 0.9904890022413647 0.9031019838356539 0.20887383703333284 0.05724511779484272 0.34785315194080574 1.4066118305484037 0.010862286741728466 0.012505003382143564 2.675651116612032e-09 8.57257051572042 -0.08738701840571084 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(ph)SPR ddPTM_A549_PD325901_60min_R1 4 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR 40 2 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(0.573)S(0.427)PR;VHEPPREDAAPTKPAPPAPPPPQNLQPES(0.001)DAPQQPGS(0.597)S(0.402)PR;VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(0.573)S(0.427)PR;VHEPPREDAAPTKPAPPAPPPPQNLQPES(0.002)DAPQQPGS(0.6)S(0.398)PR 144.18 2.2109e-40 751163000.0 9371.5 10976.800000000001 10135.199999999999 11370.49 12273.5 11568.580000000002 10961.980000000001 12492.59 11766.429999999998 11335.2 13152.06 True False 10322.88778106633 11901.853459082951 10823.035619908676 12072.819343043582 11411.451701276386 11474.36932003048 11379.144147525618 12243.415492202741 11271.927865962527 10619.493537522661 11534.439997777517 0.894962198689782 1.0318536020280333 0.9383234575752342 1.0466758113414956 0.9893372979941091 0.9947920594533751 0.9865363337724395 1.061465965799972 0.9772410163072007 0.9206769933840612 1.0 13.493660341780904 -5.2483699256256635 24.48989991297481 0.9961628560135446 0.8949621116628798 0.33823819219705176 0.04005370705711952 1058.2274675443862 1982890.2974968897 0.00406357438079253 0.10223964108214542 5.644559747240836e-06 5.2483699256256635 -0.10120074435066484 VHFEES(ph)SKLEDLLR ddPTM_A549_PD325901_60min_R1 1 VHFEESSKLEDLLR 14 1 P12956;P12956-2;B1AHC9 P12956 XRCC6 X-ray repair cross-complementing protein 6 1 VHFEES(0.5)S(0.5)KLEDLLR 54.233999999999995 0.0051162 1436200.0 469.51 940.68 583.29 981.74 967.75 622.05 601.72 633.95 825.35 891.33 825.43 True False 517.1743095650057 1019.9544049167465 622.8755670077093 1042.3798501066888 899.7785785562571 616.9842310400205 624.6187838738181 621.3053699258462 790.6634097319387 835.0512716846706 723.9073428318839 0.7144205880573743 1.408957120018625 0.8604354869105981 1.439935456420374 1.242947163702436 0.852297241006582 0.8628435531961112 0.8582664288157865 1.0922163140919512 1.1535333630102411 1.0 9.499661239857279 -7.247185817921391 24.850168744646577 1.0021088565740528 1.1505230745110844 0.11005345616387052 0.21888317335730081 1335.125286897789 2327704.7766507287 0.029573951056032555 0.05107018306748603 5.659970688258181e-08 7.247185817921391 0.14841421793703158 VHGEPT(ph)SDLSDID ddPTM_A549_PD325901_60min_R1 1 VHGEPTSDLSDID 13 0 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 VHGEPT(0.497)S(0.497)DLS(0.006)DID 48.74100000000001 0.033739 1501900.0 187.16 206.21 191.23 126.84 229.48 378.81 157.2 258.79 291.53 181.43 328.0 True False 206.16034542009015 223.58804039405797 204.20801775940657 134.6746187254594 213.3621164630223 375.72509695405535 163.18233202314073 253.62823043317238 279.27800792288383 169.9744788369625 287.658079363311 0.7166853991252249 0.7772701566002851 0.7098984259763922 0.4681760339342525 0.7417212717795657 1.3061517263331097 0.5672788067845023 0.8817003540958811 0.9708679434313987 0.5908906824837881 1.0 8.168211181094359 -7.576187732916282 0.5508266328113597 0.9930974877309593 0.6710285872936429 0.0 0.22748350310677537 0.8649743331046091 0.5228598470210245 0.04686323367327415 0.1128194677424513 2.6534583009178927e-08 7.576187732916282 -0.3220689004373164 VHGEPTS(ph)DLS(ph)DID ddPTM_A549_PD325901_60min_R1 1 VHGEPTSDLSDID 13 0 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 2 VHGEPT(0.064)S(0.936)DLS(1)DID 119.03 1.4707e-05 7722100.0 457.28 580.67 527.47 939.09 576.98 522.96 519.52 664.11 564.86 444.31 426.25 True False 503.70272896825594 629.6050987615419 563.2672861347812 997.095456471867 536.4549152729417 518.7011871468353 539.2906178922523 650.8638050657838 541.1208985535625 416.2561907735811 373.823952221376 1.347432998808933 1.6842288864055828 1.506771523835418 2.667286166514536 1.435046930741497 1.3875547140961797 1.4426325939994558 1.7410971158968078 1.4475286972331682 1.1135086136136003 1.0 8.54621520038781 -9.90270726540352 0.3955864378756655 0.9160817737320222 1.7218299999246853 0.30021334287556967 0.3470671217678953 1.2298735422216804 0.37685169380979006 0.40007549889063376 0.13013453257181828 1.2511020467978484e-10 9.90270726540352 0.8057482261926632 VHGEPTSDLS(ph)DID ddPTM_A549_MK2206_60min_R1 2 VHGEPTSDLSDID 13 0 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 VHGEPT(0.003)S(0.031)DLS(0.966)DID;VHGEPT(0.007)S(0.07)DLS(0.922)DID 78.342 0.00084628 2437100.0 498.98 649.55 593.74 192.22 410.12 492.04999999999995 344.84000000000003 399.91 918.39 394.16999999999996 577.64 True False 583.1956251102637 682.6093205476317 677.9412600014688 239.31390862908376 349.791891282679 544.1184044036445 407.49296431874 456.5984671730109 710.3761313674688 305.1267232370459 434.19604594702736 1.343161989967579 1.5721223786338008 1.5613713352059837 0.5511655641799199 0.8056081913867871 1.2531629651690284 0.9384999428770819 1.0515951755781687 1.6360723180195333 0.7027395253485839 1.0 8.76220277773011 VHGEPTSDLS(ph)DID ddPTM_A549_PD325901_60min_R1 1 VHGEPTSDLSDID 13 0 O95696-2;O95696 O95696-2 BRD1 Bromodomain-containing protein 1 1 VHGEPTS(0.001)DLS(0.999)DID 85.958 0.00025985 1596200.0 0.0 228.68 188.82 168.17 275.16 316.96 268.35 212.2 149.14 228.65 239.77 True False 0.0 247.9516661525298 201.63446066689926 178.557478958219 255.83371085046738 314.37878284775286 278.56220609675455 207.9675045323203 142.87216444832052 214.21299997834694 210.27981002725932 0.0 1.1791510850251716 0.9588864505858202 0.8491422877691965 1.2166346869787583 1.4950497758534156 1.3247215986196845 0.9890036732740093 0.679438337089041 1.018704553473668 1.0 7.716166526426147 -5.253659078317058 24.407089493933373 0.9703296456732718 6.561346604886801e-07 0.6075145410819967 0.23514053899554124 445.162970485888 1396445.7045928964 0.0386356347302983 0.5676869934591844 5.5762331212646184e-06 5.253659078317058 -0.9703289895386114 VHGS(ph)PLELK ddPTM_A549_MK2206_60min_R1 2 VHGSPLELK 9 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 VHGS(1)PLELK;VHGS(1)PLELK 64.439 0.0019285999999999997 19075600.0 1196.97 1117.74 1052.13 548.94 1482.25 1208.85 1149.49 1350.73 1572.0 1570.38 2060.56 True False 1398.9892728931663 1174.6281917464557 1201.3378547602417 683.4303246428532 1264.2129885247014 1336.769704630313 1358.3374537604345 1542.2001139371382 1215.944509968163 1215.630067323723 1548.8660834370992 0.9032344938360712 0.7583794391958215 0.7756240953345332 0.44124558730490654 0.8162183948913633 0.8630634494002725 0.8769883131188068 0.9956962260512746 0.7850546428583757 0.7848516281188818 1.0 10.596996697276904 -6.996114551104929 24.999757496315453 0.8978038877912518 0.714182408995135 0.2813532625811288 0.12176781346759176 108.97758323669589 701171.5807640661 0.01835549918061409 0.03458276664486255 1.0089867169393473e-07 6.996114551104929 -0.1836214787961168 VHGS(ph)PLELK ddPTM_A549_PD325901_60min_R1 2 VHGSPLELK 9 0 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3;D6RD46 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 VHGS(1)PLELK;VHGS(1)PLELK 106.62 0.0001597 27700000.0 2800.2 2654.6099999999997 2599.68 1973.57 2860.3 1999.25 2364.15 2164.5299999999997 2715.3 2625.7 2786.2 True False 3084.4742426017106 2878.323301054607 2776.109917945792 2095.4729365973267 2659.402395499315 1982.968770849226 2454.1190219625187 2121.3567511090637 2601.185383710105 2459.9128538952345 2443.515063177003 1.2623103041531272 1.1779437517820235 1.136113281960438 0.8575649760361371 1.0883511362690845 0.8115230393836881 1.0043396330742191 0.8681578366662179 1.0645260276513715 1.0067107385443785 1.0 11.254742282843473 -6.037266430171803 5.419963550844624 0.9965316337394625 1.2076973763994692 0.5571880007362489 0.08910271793086008 0.11506106696660838 8.99827210489975 0.012368719713232829 0.03506955027728255 9.177693922830252e-07 6.037266430171803 0.21116574266000665 VHIDIGADGR ddPTM_A549_PD325901_60min_R1 1 VHIDIGADGR 10 0 P31942-4;P31942-3;P31942-2;P31942;P31942-6;P31942-5 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 67.726 0.0092249 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VHIEIGPDGR ddPTM_A549_PD325901_60min_R1 2 VHIEIGPDGR 10 0 P31943;G8JLB6;E9PCY7;P55795;H0YB39;H0YBD7;H0YBG7;P52597 P31943;P52597 HNRNPH1;HNRNPH2;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed 0 ; 110.38 0.00020257 25052000.0 1007.22 916.4000000000001 887.56 618.34 1109.4299999999998 1015.97 689.61 921.76 1145.15 977.29 921.13 False True 1109.4722329238252 993.62824410608 947.7951589318565 656.5334574479704 1031.5074641257231 1007.6962771637795 715.8534859190712 903.3747736932684 1097.0233278663968 915.5837426146455 807.8368495241664 1.3733865118647766 1.2299862833582658 1.1732507120591598 0.812705508339565 1.2768759740698925 1.2474007316667155 0.8861362122076067 1.1182638848740014 1.3579763395450055 1.1333770465582802 1.0 9.657920145933634 -5.427377953636545 2.4469819545871796 1.139191466119296 1.3855421987920038 0.1884394658458285 0.15667251777446026 0.6218901435765446 5.704621272018031 0.024827836140349894 0.27193313791129503 3.737851525263448e-06 5.427377953636545 0.2463507326727079 VHISGS(ph)VDGLDK ddPTM_A549_PD325901_60min_R1 1 VHISGSVDGLDK 12 0 J3KP75 J3KP75 PHACTR2 Phosphatase and actin regulator 1 VHIS(0.432)GS(0.568)VDGLDK 66.285 0.0016626999999999998 3308400.0 791.29 982.59 1015.9 1130.7 1112.9 974.82 914.16 1179.2 1423.4 1258.7 1355.8 True False 871.6211782830895 1065.3963076999053 1084.8450831029718 1200.540770993984 1034.733743296573 966.8813891205411 948.9488590475466 1155.6799309354951 1363.5794480068357 1179.225467188914 1189.0451951243201 0.7330429338238548 0.896009934751482 0.9123665673528467 1.0096679049011774 0.8702223830847632 0.8131578119025571 0.798076358189505 0.9719394482853644 1.146785213546292 0.9917415015209919 1.0 10.21558783703964 -8.51796575225428 5.913122081785097 1.0691608600256666 0.8698464158239946 0.5218275850159336 0.07745628014864535 0.09138545805828975 12.411406440724786 0.014258542342226588 0.016663212200702233 3.0341304412769663e-09 8.51796575225428 -0.199314444201672 VHKPPKVQEK ddPTM_A549_MK2206_60min_R1 1 VHKPPKVQEK 10 2 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 93.05799999999999 0.00017971 2266600.0 1281.0 1009.8 578.55 662.15 1269.0 1087.5 677.41 639.88 1366.9 1134.6 776.38 False True 1497.2014825569113 1061.194506795471 660.5970895911512 824.3767797250431 1082.331781034135 1202.5785281759233 800.4866284629327 730.5849495503141 1057.299332490765 878.2930719860778 583.5834190020652 2.565531222797838 1.8184109970261435 1.1319668586896803 1.412611724189727 1.854630796202085 2.060679740065863 1.371674729607251 1.2518946319613113 1.8117364168755168 1.5050000452171342 1.0 9.188795083203042 -12.400269814254985 0.3299093178374367 6.804250099789224e-17 1.7373069789491733 0.11747316982692857 0.4100036081291007 9.055560837287958 0.5233946504794375 6.764356227455767 0.13680513010584502 3.97859915213768e-13 12.400269814254985 1.7373069789491733 VHKPPKVQEK ddPTM_A549_PD325901_60min_R1 2 VHKPPKVQEK 10 2 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 69.34899999999999 0.0010799000000000002 3290100.0 2202.5 2121.05 1370.04 1194.92 2178.1 2718.0 1340.75 1342.65 2039.9 2434.3 1645.8899999999999 False True 2426.0961786051967 2299.7983273256214 1463.0191531197897 1268.7274945397821 2025.1177700370788 2695.865509150027 1391.772974936552 1315.869792461451 1954.1700969433368 2280.5978825597645 1443.4559641563403 1.6807552421754564 1.593258391273328 1.0135530209782906 0.8789512988581664 1.4029647043792595 1.867646520637493 0.9641949664533094 0.9116106241803782 1.3538134487431313 1.5799566728678904 1.0 10.495311380277322 -2.0000000002083027 0.029087257642178725 1.4307076509759325e-13 3.144349021915637 0.0 0.34036169508717634 1932.8635946644913 4.1954737418900105 145.17233656903173 350.5755121186532 0.009999999995203653 2.0000000002083027 3.144349021915494 VHLVGIDIFTGK ddPTM_A549_MK2206_60min_R1 2 VHLVGIDIFTGK 12 0 I3L397;I3L504;P63241;P63241-2;Q6IS14;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 0 ; 141.1 1.2240999999999998e-11 9455700.0 3233.6 3138.3 3529.0 2292.9 4697.4 3975.9 4284.7 3905.1000000000004 5176.200000000001 4444.200000000001 4640.7 False True 3779.3526260702824 3298.0260652369066 4029.465265175301 2854.6606029321943 4006.4186826081536 4396.627099011177 5063.174527944856 4458.659883867181 4003.7989646928777 3440.2521333690524 3488.2861131957084 1.0834411236433588 0.9454574419113518 1.1551418474340123 0.8183562099832936 1.1485349975887644 1.260397500761001 1.4514791400830227 1.278180670731303 1.1477839932759686 0.9862299197176086 1.0 11.768302661118675 VHLVGIDIFTGK ddPTM_A549_PD325901_60min_R1 2 VHLVGIDIFTGK 12 0 I3L397;I3L504;P63241;P63241-2;Q6IS14;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 0 ; 122.69 1.0792000000000001e-05 19370100.0 3413.7 3547.8 4442.2 4241.1 4631.0 4876.2 5019.6 4511.3 4281.0 4441.2 4618.9 False True 3760.2563109668813 3846.785557005184 4743.674405118631 4503.063114763055 4305.734536082693 4836.489843898957 5210.623624830514 4421.318582453613 4101.084457578518 4160.781874060067 4050.8045816195026 0.9282739355112359 0.9496349378244378 1.1710449886037504 1.1116465936657798 1.0629331653321252 1.1939578289815547 1.2863181918164313 1.0914667674948615 1.012412318329835 1.027149493446212 1.0 11.983992773061226 -8.747866673304097 5.138773578082717 1.0055464206523348 1.1058686325349165 0.13372883329959362 0.09674892719279304 0.24538093645847095 17.809089939533372 0.017626785854863106 0.019467823377423196 1.787036103696997e-09 8.747866673304097 0.10032221188258172 VHMT(ph)WTK ddPTM_A549_MK2206_60min_R1 4 VHMTWTK 7 0 Q9UHW9-3;Q9UHW9-4;Q9UHW9;B3KXX3;Q9UHW9-6;Q9UHW9-5;Q9UHW9-2 Q9UHW9-3;Q9UHW9-2 SLC12A6 Solute carrier family 12 member 6 1 VHMT(0.999)WT(0.001)K;VHMT(0.998)WT(0.002)K;VHMT(0.998)WT(0.002)K;VHMT(0.998)WT(0.002)K 59.8 0.007755800000000001 11238600.0 4555.51 5265.93 4403.120000000001 3549.07 6686.800000000001 5564.33 5009.6900000000005 5198.07 6696.799999999999 6991.7 6746.0 True False 5324.368716473723 5533.943344394411 5027.548625219233 4418.592309323807 5703.1805779504 6153.14370729668 5919.885826522293 5934.9123409217345 5179.985492592108 5412.270114053459 5070.782019871623 1.0500093862462108 1.0913392298678448 0.991474018310595 0.8713828147232551 1.124714206921241 1.2134506439408057 1.1674502676950345 1.170413620160306 1.021535824709588 1.067344266198704 1.0 12.307992542578871 -4.41864506053419 16.402257835526612 1.0449790030094233 1.0710341722029277 0.0 0.09710319912219174 0.0 0.0 0.013777048911844014 0.0 3.8137738753079236e-05 4.41864506053419 0.02605516919350448 VHMT(ph)WTK ddPTM_A549_PD325901_60min_R1 3 VHMTWTK 7 0 Q9UHW9-3;Q9UHW9-4;Q9UHW9;B3KXX3;Q9UHW9-6;Q9UHW9-5;Q9UHW9-2 Q9UHW9-3;Q9UHW9-2 SLC12A6 Solute carrier family 12 member 6 1 VHMT(0.998)WT(0.002)K;VHMT(0.998)WT(0.002)K;VHMT(0.996)WT(0.004)K 50.04 0.014006000000000001 9225500.0 4035.5200000000004 3062.5499999999997 3482.01 3735.0699999999997 3910.6 4000.49 3508.25 3512.05 4527.6 4287.87 4567.2 True False 4445.203019607194 3320.6418365201575 3718.320137627107 3965.7767909405657 3635.932946837609 3967.911335798233 3641.758373538064 3441.999407600075 4337.32071715312 4017.13315642753 4005.4633538662024 1.109784967903037 0.8290281406057471 0.9283121100179496 0.9900918921434321 0.9077434058479374 0.9906248004911284 0.9091977760882325 0.8593261511874141 1.0828511794937778 1.0029134713091468 1.0 11.967753428584091 -8.773741607232902 24.99882672404438 1.0391241682388237 0.9375775231560097 0.21685694540097467 0.0736507418287227 200.77462221134155 407984.09386978653 0.012163516499719694 0.012993934329446916 1.683675501785412e-09 8.773741607232902 -0.10154664508281397 VHNDAQS(ph)FDYDHDAFLGAEEAK ddPTM_A549_PD325901_60min_R1 1 VHNDAQSFDYDHDAFLGAEEAK 22 0 O43852-12;O43852-13;O43852-14;O43852-9;O43852-7;O43852-11;O43852-8;O43852-10;O43852-5;O43852-6;O43852-2;O43852;O43852-4;O43852-3 O43852-12 CALU Calumenin 1 VHNDAQS(1)FDYDHDAFLGAEEAK 155.22 1.8949e-32 4146400.0 1870.0 1307.1 1499.4 1297.5 1963.8 1340.4 1403.8 1438.1 1465.6 1432.1 1991.6 True False 2059.8410233787595 1417.2539042678493 1601.158300624662 1377.6436281636986 1825.8694627422135 1329.4842268082039 1457.2223771888353 1409.415967332375 1404.0059287612892 1341.6769615962842 1746.645825792591 1.1793123671446368 0.8114145886586535 0.9167046214982308 0.7887366790794883 1.0453575852526784 0.7611641737413548 0.8342975751982108 0.8069271666411316 0.8038297793567742 0.7681448303850951 1.0 10.77037138165496 -5.252694186422657 24.50483332434762 0.8830614218491815 1.1793125680819203 0.4732296042365868 0.094240374181736 636.1490034367584 1782496.2426370904 0.013345908956755529 0.21720963931280574 5.588635865952065e-06 5.252694186422657 0.29625114623273885 VHNNS(ph)PDTSR ddPTM_A549_MK2206_60min_R1 2 VHNNSPDTSR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(0.952)PDT(0.021)S(0.027)R;VHNNS(0.995)PDT(0.005)S(0.001)R 94.465 0.00057763 26014000.0 787.66 846.4200000000001 507.90000000000003 146.16 659.64 647.48 734.85 618.26 952.36 948.86 1007.24 True False 920.5977515618865 889.4991626478745 579.927857235063 181.96920656137178 562.607829819824 715.9959038375606 868.3627329475299 705.9002483418411 736.6519806064123 734.5118669881094 757.1145095902015 1.2159293474116255 1.1748542015517944 0.7659711310366472 0.24034568649313706 0.7430947666348954 0.9456903741352192 1.1469371171047074 0.9323559902767142 0.9729730064282287 0.9701463354409546 1.0 9.564367706530367 -7.427350144084144 5.834122712631738 0.9949221057757989 0.8124385165566115 0.10462710101947237 0.24434569792665883 0.44372896582573845 22.15585888206077 0.03891913581241408 0.062365948668014294 3.738090881991094e-08 7.427350144084144 -0.1824835892191874 VHNNS(ph)PDTSR ddPTM_A549_PD325901_60min_R1 2 VHNNSPDTSR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(0.779)PDT(0.18)S(0.04)R;VHNNS(0.715)PDT(0.108)S(0.177)R 78.692 0.0013130999999999998 19158000.0 1231.2199999999998 995.3199999999999 782.13 769.6600000000001 996.26 898.4399999999999 901.14 839.21 1058.3 1046.55 1080.6399999999999 True False 1356.2125480237414 1079.1991094758434 835.2100451297637 817.2001501753155 926.2861345104178 891.1234025168327 935.4333758227286 822.4712982024909 1013.8233313373855 980.4706543946597 947.7281307413667 1.4310143426499697 1.1387222500524836 0.8812759883748675 0.8622727591045073 0.9773753721817081 0.9402732425170764 0.9870271288570696 0.8678346368795734 1.0697406760990784 1.0345484349268814 1.0 9.888329450709026 -5.368753996350578 3.0817307069809696 0.9908322213207374 1.4533798833328364 0.7832017845879613 0.07193717215757169 0.11819827905076986 1.767285727587053 0.011380679759141525 0.11342799236011389 4.278051453334158e-06 5.368753996350578 0.46254766201209896 VHNNS(ph)PDTSRR ddPTM_A549_MK2206_60min_R1 2 VHNNSPDTSRR 11 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(1)PDTSRR;VHNNS(1)PDTSRR 127.71 4.9697e-08 96503000.0 801.8 819.8100000000001 673.77 428.84000000000003 941.29 553.02 662.4200000000001 827.37 965.3499999999999 1501.1599999999999 1027.35 True False 937.1242378720783 861.5348273083736 769.3207174035603 533.9058192513592 802.8274879193232 611.5402093350339 782.7731394966352 944.6522312143579 746.6997663471794 1162.046913399101 772.2306415824364 1.213528947714048 1.1156444472896558 0.9962317939457657 0.6913812927149487 1.0396213834175092 0.7919139391851642 1.013652006727673 1.2232773220169033 0.9669387954058133 1.504792546198196 1.0 9.592887990340397 -5.624577036498944 3.131170229520132 0.9737554460064135 1.197536468358735 0.02605319127640382 0.2054749185997027 0.25136615069259166 4.648315848647188 0.01731050487421772 0.0910210595310508 2.3736843339175155e-06 5.624577036498944 0.22378102235232156 VHNNS(ph)PDTSRR ddPTM_A549_PD325901_60min_R1 2 VHNNSPDTSRR 11 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(0.999)PDTSRR;VHNNS(1)PDTSRR 114.56 9.4361e-06 132423000.0 993.93 1221.85 1039.8 1036.54 1236.0700000000002 1159.29 1241.9099999999999 1535.52 1526.02 1490.87 1473.1399999999999 True False 1094.8330419074068 1324.8195875829476 1110.3670808253457 1100.5647216468597 1149.252707410006 1149.849126601375 1289.1715646492282 1504.8928490078627 1461.8866862774994 1396.7362137665348 1291.953119003866 0.8474247446002958 1.0254393662553503 0.8594484308234586 0.8518611902074492 0.8895467571579638 0.890008398670025 0.9978470160304405 1.1648200131040198 1.1315323015781387 1.0811044094567916 1.0 10.335338004687925 -7.92825418160647 3.992048209882124 1.0720421715941948 0.896725207541719 0.7007325281698729 0.06055490218659333 0.12144760664671603 3.8549536300316984 0.011268914735995145 0.01569346549119022 1.1796300258717199e-08 7.92825418160647 -0.17531696405247577 VHNNSPDT(ph)SR ddPTM_A549_PD325901_60min_R1 1 VHNNSPDTSR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(0.276)PDT(0.585)S(0.139)R 86.344 0.00081572 12131000.0 467.45 446.56 548.47 469.42 671.16 343.72 254.49 529.42 492.22 590.8 630.17 True False 514.9051798814979 484.193178402456 585.6924724180396 498.41500726982923 624.0200369763035 340.92085828000296 264.1747562122716 518.8603027780447 471.53370514115807 553.4967871734415 552.6630849767612 0.9316800667139711 0.876109136948808 1.0597640557857548 0.9018424078220947 1.1291147426692028 0.6168692419439201 0.47800325984026926 0.9388365477673656 0.85320282457618 1.0015085179729624 1.0 9.110256441010405 -5.225402741559716 19.06294415237555 0.8981828115353818 0.9316817378153326 0.0009272336473934439 0.18099365767260206 6229.111081545124 3293682.2122875294 0.024991236988356792 3.3567000382080017 5.951100142461118e-06 5.225402741559716 0.03349892627995077 VHNNSPDTS(ph)R ddPTM_A549_PD325901_60min_R1 1 VHNNSPDTSR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(0.271)PDT(0.271)S(0.458)R 80.979 0.0011507 10446000.0 577.82 443.3 441.39 543.19 747.72 386.89 320.01 454.33 549.42 577.28 501.08 True False 636.4798610313982 480.65844676148527 471.3453796936909 576.7416126260032 695.202726693965 383.73929611297046 332.18815566619105 445.2680317350099 526.3297880595162 540.830442280779 439.450336607829 1.4483544737830085 1.0937719389903002 1.0725794030152842 1.312415908195548 1.5819824648680896 0.8732256278948405 0.7559173995186627 1.013238572467798 1.1977002728506714 1.2306975264952928 1.0 8.7795563217462 -7.283576427303254 24.997967533931707 1.0469772085859703 1.27811560424799 0.36983330014656235 0.1842532446691209 865.7469285980745 977631.006385191 0.029058751243180237 0.04647624395092232 5.2050340236041515e-08 7.283576427303254 0.23113839566201966 VHNQDS(ph)EDEL ddPTM_A549_PD325901_60min_R1 2 VHNQDSEDEL 10 0 Q8TAM1 Q8TAM1 BBS10 Bardet-Biedl syndrome 10 protein 1 VHNQDS(1)EDEL;VHNQDS(1)EDEL 113.44 0.00010743 18090000.0 2672.3 2172.7 1945.19 2245.04 2613.2 2087.2 2007.25 2251.2 2311.3 2303.7 3050.9 True False 2943.589928756715 2355.8010540913124 2077.202290777703 2383.711021944222 2429.6578470505924 2070.2025352089545 2083.6369971593467 2206.298049967764 2214.1640987622586 2158.2439888480994 2675.658641248552 1.1001365732450599 0.8804565043439235 0.776333071324977 0.8908875688387149 0.9080597239103836 0.7737169844068481 0.7787379768994194 0.8245812884928518 0.8275211436272959 0.8066215755538196 1.0 11.385678354306835 -10.753147761593144 1.016342511558009 0.9995459143440166 0.8553934831586442 0.0 0.10435871949763825 0.5770899820274802 1.0637674796085173 0.05904431801300763 0.015267639313126989 1.7654370574128015e-11 10.753147761593144 -0.14415243118537246 VHPVSTMIK ddPTM_A549_MK2206_60min_R1 2 VHPVSTMIK 9 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ; 55.111999999999995 0.004524800000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VHPVSTMIK ddPTM_A549_PD325901_60min_R1 3 VHPVSTMIK 9 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ;; 57.59 0.0038033999999999997 12831400.0 5135.0 4816.3 4513.4 5235.6 5969.6 5874.299999999999 4478.5 5830.0 6604.5 4855.5 5402.3 False True 5656.301419812793 5222.186503806323 4819.706465279014 5558.991121089679 5550.315890001999 5826.461648417959 4648.931768229236 5713.7160764534765 6326.935832767423 4548.922901355183 4737.851348001268 1.1938537122315978 1.1022267522195224 1.0172768437136124 1.1733148030139908 1.171483755467229 1.2297687750114694 0.9812320874504549 1.205972002237658 1.3354019297031203 0.9601236018673767 1.0 12.210017218810993 VHRPRS(ph)PILEEK ddPTM_A549_MK2206_60min_R1 2 VHRPRSPILEEK 12 2 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;A0A0A0MR81 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 VHRPRS(1)PILEEK;VHRPRS(1)PILEEK 91.789 5.5223e-05 222820000.0 4732.5 4623.7 4266.0 3132.9 4902.9 4793.0 4774.8 4590.1 5732.299999999999 5674.6 6148.7 True False 5531.230301483671 4859.026580580531 4870.982947361251 3900.460640641223 4181.689904832358 5300.192078664091 5642.319353987706 5240.760731591697 4433.943202602097 4392.703918819139 4621.808094512993 1.1967676260834679 1.0513259056232047 1.0539128513674287 0.8439252692624445 0.9047735906207046 1.1467789164497062 1.220803468816947 1.133920021000769 0.9593525113831686 0.9504297515152466 1.0 12.174241642511287 -8.786084112880328 24.959844395030487 0.9808053447267876 1.0626047870538462 0.13770452157102187 0.10866260235058156 415.0678527530773 420373.1318029799 0.020415653683835907 0.02173865713927327 1.636499538306194e-09 8.786084112880328 0.0817994423270586 VHRPRS(ph)PILEEK ddPTM_A549_PD325901_60min_R1 2 VHRPRSPILEEK 12 2 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;A0A0A0MR81 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 VHRPRS(1)PILEEK;VHRPRS(1)PILEEK 115.58 5.344e-06 282730000.0 6378.700000000001 6659.3 7399.5 6532.5 7215.0 6388.4 6585.6 6612.3 7270.200000000001 7786.4 8836.0 True False 7026.2609282492485 7220.502581815386 7901.674566808179 6935.997688616074 6708.24329039875 6336.374988467267 6836.218611778593 6480.412489250996 6964.658776801528 7294.765375164666 7749.228016018953 0.9067046309290151 0.9317705669376869 1.0196724822748917 0.8950566010289288 0.8656660091213844 0.8176782223169737 0.8821805988476509 0.8362655577890982 0.8987551743740682 0.9413538174493206 1.0 12.91983687983155 -10.42256071726521 0.9205515248891815 0.995974888319221 0.8955607673002456 0.21202195501362187 0.052601124056703245 0.49127611473852023 0.7893472170923855 0.02962739665569489 0.010266577252797966 3.7795429307687335e-11 10.42256071726521 -0.1004141210189754 VHS(ph)FQQDK ddPTM_A549_MK2206_60min_R1 1 VHSFQQDK 8 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 VHS(1)FQQDK 70.399 0.0020336 7149400.0 1880.2 2011.0 1622.0 1301.6 2125.3 1724.7 1492.1 1578.9 2562.5 2302.5 2007.1 True False 2197.531793523422 2113.351310324513 1852.0239898312107 1620.4920584310448 1812.6711853678853 1907.206609236795 1763.1952559447627 1802.7139101784574 1982.0978414716399 1782.3636508443008 1508.681676858041 1.4565907621414018 1.40079338321769 1.227577704587895 1.0741113140618626 1.2014934715339876 1.2641544193793857 1.168699324046122 1.1948934873609411 1.3137946008594261 1.181404717896638 1.0 10.559072722293593 -13.695280329705737 0.3247725223090219 1.4052101954431307e-10 1.269551375739474 0.15493402572654058 0.11557658862904173 15.038180249846835 0.4276202480699677 9.74896620196058 0.03674133896401982 2.0170639628869055e-14 13.695280329705737 1.2695513755989531 VHS(ph)FQQDK ddPTM_A549_PD325901_60min_R1 2 VHSFQQDK 8 0 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 TICRR Treslin 1 VHS(1)FQQDK;VHS(1)FQQDK 102.52 0.00040533 8491100.0 2120.3 2511.0 1964.9 2358.2 2630.7 2196.6 1850.4 2439.9 2922.7 2467.2 2340.5 True False 2335.5512951176383 2722.610782355265 2098.2499299035603 2503.860658139216 2445.9287074223134 2178.71161788041 1920.8179845777315 2391.234280435479 2799.869082963031 2311.420570945013 2052.633337651918 1.137831707337152 1.3263989882721865 1.0222234489788737 1.219828506246261 1.1916052723864947 1.0614226992789262 0.935782318908951 1.164959292325876 1.3640376152936808 1.1260757235820458 1.0 11.003260226188228 -5.7473892644209315 24.99464464411142 1.1485623194671781 1.2321152313122683 0.07562576556048439 0.12166102293141892 686.7713509274364 1221719.0803184449 0.021000481584628715 0.08054564093173758 1.7890016271821866e-06 5.7473892644209315 0.08355291184509017 VHS(ph)PPASLVPR ddPTM_A549_PD325901_60min_R1 2 VHSPPASLVPR 11 0 Q9BTE3;Q9BTE3-2;Q9BTE3-3 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VHS(1)PPASLVPR;VHS(1)PPASLVPR 131.69 2.5219e-08 30355000.0 2470.3 2120.6000000000004 2088.5 2011.43 2256.3 2013.42 2066.27 1738.3999999999999 2571.2 2423.6 2505.8 True False 2721.083037461255 2299.3104042463483 2230.238169170741 2135.671462811027 2097.825271812434 1997.0233750672744 2144.9030355563286 1703.7262482515825 2463.1414055888536 2270.573482385836 2197.6024855749547 1.2382052966004646 1.0462813085346434 1.0148505854948775 0.9718188238453304 0.954597242031961 0.9087282109370188 0.9760195711624169 0.7752658906398351 1.120831188423245 1.033204820839921 1.0 11.101714731934322 -5.241560653570366 2.6918876328040224 1.0095264133548973 1.2897013282235055 0.3888774525923535 0.08722007476749581 0.4890835193330806 4.4602759124075835 0.013948403730741406 0.31108418878109495 5.733757832879954e-06 5.241560653570366 0.2801749148686081 VHS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 VHSPPR 6 0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 VHS(1)PPR 66.79899999999999 0.055545000000000004 43402000.0 4329.2 4569.8 4035.2 3204.8 4372.3 4281.8 3592.3 3512.8 4602.0 4697.7 4920.3 True False 4768.697197011405 4954.913083714498 4309.052937628811 3402.753217371115 4065.2047316161425 4246.930440426268 3729.006942281986 3442.7344482617127 4408.593943886088 4401.086420285501 4315.134292351522 1.105109800513929 1.1482639352608257 0.998590691665497 0.7885625305804314 0.9420806992778014 0.9841942689834373 0.8641693837643863 0.7978278808990676 1.021658573106339 1.0199187608335452 1.0 12.075189743230808 -5.840711722307514 5.274516283812179 0.9640674324253762 1.1261889285178917 0.40499461168837403 0.0843882372074736 0.17334091235490146 8.237635472616008 0.013042335248570852 0.0429598823336331 1.4430729222770632e-06 5.840711722307514 0.16212149609251547 VHSEAIS(ph)PAPEEK ddPTM_A549_MK2206_60min_R1 2 VHSEAISPAPEEK 13 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VHSEAIS(1)PAPEEK;VHS(0.001)EAIS(0.999)PAPEEK 107.74 2.465e-05 32644000.0 2421.6499999999996 2794.7 3069.1 2281.8 4141.2 2827.3 2788.0 3134.5 3965.2000000000003 4034.5 4423.0 True False 2830.3653163418776 2936.9382928711652 3504.344529710831 2840.841102433893 3532.034965814469 3126.48300939015 3294.54351154346 3578.824974003655 3067.0885311232587 3123.1036479180602 3324.647031410052 0.851328062679021 0.883383488570078 1.05405009813164 0.8544790095293313 1.0623789329950193 0.9403954705122918 0.9909453486092855 1.0764526099138412 0.9225305730643059 0.9393790132943788 1.0 11.6989854664594 -5.59218102071343 8.318984469531426 0.9743962623817554 0.8592301090134228 0.3235297346969629 0.0639267735614056 0.19198366739897346 20.278464766063692 0.00811665794709647 0.031718494829434306 2.557519650630985e-06 5.59218102071343 -0.11516615336833258 VHSEAIS(ph)PAPEEK ddPTM_A549_PD325901_60min_R1 2 VHSEAISPAPEEK 13 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VHSEAIS(1)PAPEEK;VHSEAIS(1)PAPEEK 142.45 7.5564e-13 47288000.0 5647.7 6069.4 5596.5 5458.3 7889.6 7092.6 6021.0 6653.7 6522.7 6535.7 6590.200000000001 True False 6221.050346383003 6580.889638561155 5976.312144488412 5795.446794301281 7335.461713642416 7034.840217144036 6250.13244981762 6520.98673377333 6248.573602300256 6123.03478661046 5779.647178719796 1.0763719919251158 1.1386317252706135 1.0340271576598516 1.002733664373088 1.269188496600797 1.2171746820542544 1.0814038048602885 1.1282672682483263 1.0811340915942085 1.0594132474305682 1.0 12.496765710078796 -9.754926183652707 0.78470041516009 1.00907782081692 1.1193946615822283 0.16113745422119663 0.07376645111066638 0.5901060797734282 0.7630021833255736 0.029813213775908235 0.016229029923137357 1.7582224308534134e-10 9.754926183652707 0.11031684076530834 VHSFPTLK ddPTM_A549_MK2206_60min_R1 1 VHSFPTLK 8 0 H7BZ94;P07237;H0Y3Z3;I3L0S0 H7BZ94 P4HB Protein disulfide-isomerase 0 77.282 0.0048325 2418100.0 596.73 752.77 722.64 864.91 1001.1 802.19 691.05 757.55 1349.0 1001.7 1003.4 False True 697.443435352214 791.0827776593657 825.1212182562432 1076.8129888272852 853.839516149151 887.0772133493738 816.6048399039123 864.9350323995757 1043.453653910339 775.4152742891358 754.2280875688097 0.9247115651717027 1.0488641177622462 1.0939942861528156 1.427702052701724 1.1320706961489997 1.1761391918044208 1.082702770373043 1.1467817847882336 1.3834722826006434 1.0280912194461245 1.0 9.55885706743768 -5.660702511488907 2.3439903188707163 1.1855196093938685 0.9428653639853608 0.24235106219606128 0.12717478727175435 0.38266760840341413 3.8498730617900065 0.02132013156708714 0.1339546688901824 2.184225577905997e-06 5.660702511488907 -0.24265424540850766 VHSFPTLK ddPTM_A549_PD325901_60min_R1 2 VHSFPTLK 8 0 H7BZ94;P07237;H0Y3Z3;I3L0S0 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 72.789 0.0059011 8340300.0 2621.3 2660.3 3293.3 3093.7 3630.5 3462.5 3330.7 3037.0 2999.1 3947.7000000000003 3689.8999999999996 False True 2887.4124463009302 2884.492817323661 3516.803142221688 3284.7908226975196 3375.5062045450695 3434.3025479882144 3457.4516111289718 2976.424652519589 2873.058256651187 3698.4415482813015 3236.065692203294 0.8922601457867868 0.8913579301784005 1.0867527042775367 1.0150569040089699 1.0430895184475804 1.0612586006095412 1.0684120595756341 0.9197664496399864 0.8878244541120699 1.1428820982194574 1.0 11.660025179467665 -8.281192438735564 24.796304267168722 0.943503487742496 1.0104645906878327 0.0 0.08924393105378235 1072.178866969589 1345918.0608886844 0.01239384385438493 0.014994927995901713 5.233684771906382e-09 8.281192438735564 0.06696110294533664 VHT(ph)GEGEAP ddPTM_A549_MK2206_60min_R1 2 VHTGEGEAP 9 0 G3V1M0;Q9Y5A6 G3V1M0 ZSCAN21 Zinc finger and SCAN domain-containing protein 21 1 VHT(1)GEGEAP;VHT(1)GEGEAP 78.934 0.0019003 3003100.0 1186.48 1458.38 1377.27 1061.94 1633.69 1233.19 949.4 1216.1399999999999 1859.76 2043.54 2173.18 True False 1386.728817349043 1532.605312755377 1572.5875958537806 1322.1153476722982 1393.3763651360573 1363.6853472747289 1121.8936907673462 1388.5315692725494 1438.5273294264578 1581.902894699832 1633.5194292832232 0.8489209203697871 0.9382228856793418 0.9626990457920791 0.8093661599436458 0.8529903839267226 0.8348142806437904 0.686795437296773 0.850024520297152 0.880630682218254 0.9684016402510497 1.0 10.673767899134331 -10.059518527756262 0.8711292273397091 0.9894043673354509 0.8510515580900206 0.3612824148525571 0.06781213811967803 0.43639293978266075 0.6649481398884133 0.031233961877231823 0.014417251582407645 8.719297024593631e-11 10.059518527756262 -0.13835280924543025 VHT(ph)GEGEAP ddPTM_A549_PD325901_60min_R1 2 VHTGEGEAP 9 0 G3V1M0;Q9Y5A6 G3V1M0 ZSCAN21 Zinc finger and SCAN domain-containing protein 21 1 VHT(1)GEGEAP;VHT(1)GEGEAP 87.30799999999999 0.0012194 4780200.0 1770.04 1765.2 1652.92 1996.4299999999998 2083.37 2252.6000000000004 1621.45 1823.37 1968.55 2064.02 2125.2599999999998 True False 1949.733157765421 1913.9595989699383 1765.0970910154185 2119.7449468784985 1937.041278436321 2234.2555724471495 1683.1551670414847 1787.001454943907 1885.8186893170277 1933.697424952144 1863.8664931331405 1.0460691068532166 1.026875908774234 0.9470083278595284 1.1372836813624074 1.0392596709972366 1.1987208207661852 0.9030449193880394 0.9587604377929322 1.0117777728527035 1.0374656296876814 1.0 10.864082809572308 -7.791754683810367 24.999931958337115 0.9944585925446437 1.0607311953991114 0.2610220768054182 0.06840232401688855 257.5263039257308 212371.5637186019 0.01026727986408785 0.014187190838605356 1.6152707032570304e-08 7.791754683810367 0.06627260285446768 VHT(ph)GEKPFK ddPTM_A549_MK2206_60min_R1 2 VHTGEKPFK 9 1 K7ENM7;Q8N3J9;Q9UK12;Q9UK11;Q9UK12-2;Q9NZL3;Q9UJU3-2;Q9UJU3 K7ENM7 ZNF664;ZNF222;ZNF223;ZNF224;ZNF112 Zinc finger protein 664;Zinc finger protein 222;Zinc finger protein 223;Zinc finger protein 224;Zinc finger protein 112 1 VHT(1)GEKPFK;VHT(1)GEKPFK 82.171 0.00086304 2745800.0 2148.12 2341.3 2523.5 1953.87 3290.0 3369.0 3017.1000000000004 3453.3 3475.2 3157.8 3388.3999999999996 True False 2510.670139508314 2460.4621694991465 2881.3702455851158 2432.568237712557 2806.045358236645 3725.5053438387936 3565.268016025026 3942.8158502877104 2688.0727487540476 2444.4507868126534 2546.9667649174344 0.9857490777229294 0.9660362292080823 1.131294795548116 0.9550844051910565 1.1017204452322757 1.4627224018604594 1.3998093988244884 1.5480436983305221 1.0554015803347898 0.9597497778467854 1.0 11.314564418831857 -6.971375038713107 14.359197443244556 1.1348225827035832 1.0167715918421434 0.1294290483481545 0.1963486388454568 5.698385678180323 2853.1894377718118 0.0335326434004242 0.06334158645357593 1.0681320862414154e-07 6.971375038713107 -0.11805099086143978 VHT(ph)GEKPFK ddPTM_A549_PD325901_60min_R1 2 VHTGEKPFK 9 1 K7ENM7;Q8N3J9;Q9UK12;Q9UK11;Q9UK12-2;Q9NZL3;Q9UJU3-2;Q9UJU3 K7ENM7 ZNF664;ZNF222;ZNF223;ZNF224;ZNF112 Zinc finger protein 664;Zinc finger protein 222;Zinc finger protein 223;Zinc finger protein 224;Zinc finger protein 112 1 VHT(1)GEKPFK;VHT(1)GEKPFK 82.171 0.00086304 3618700.0 1451.53 925.19 966.8 1190.58 1451.3899999999999 1105.0900000000001 1200.19 1168.5900000000001 1184.1599999999999 1085.1799999999998 1353.9 True False 1598.888257040092 1003.1590082545879 1032.4128618406853 1264.119422596636 1349.4493734236798 1096.0905134314226 1245.8638872191677 1145.2815557088798 1134.3938732273257 1016.6615496020225 1187.3788830792282 1.3465695573882004 0.8448516497557181 0.8694889866689648 1.0646302040662847 1.1364943344151064 0.9231177419872353 1.0492555535334016 0.9645460029900671 0.9553764930411289 0.856223370728571 1.0 10.213564645522556 -8.275796767086424 22.80232606624233 0.977260372619325 1.0208387325021304 0.06858115084609939 0.13532358451524712 912.9559746674823 1449949.1779004307 0.020181867477619925 0.02447441240254619 5.299113637713202e-09 8.275796767086424 0.04357835988280545 VHT(ph)GEKPYK ddPTM_A549_MK2206_60min_R1 1 VHTGEKPYK 9 1 Q8N8E2;Q8N8E2-2;M0QZI7;Q9HCG1;A0A494C069;A0A494BZV4;M0QXU9;A0A1W2PPT3;Q6ZN19;K7EPV5;A0A087WVZ7;A0A1W2PNY2;A6NK53;Q9UJW7-2;Q08AG5;P17035-2;A0A3Q5AD24;F8VS19;Q0VGE8;Q9Y2L8;Q8NHY6;Q8N8Z8-2;Q9UJW7;Q9H7R5;Q9NYT6;P17020;Q76KX8;Q08AN1;Q14586;Q14590;Q14590-2;P17035;P0CJ79;Q9UK10;P52740;Q76KX8-2;Q8N8Z8;Q14588;Q9NV72;Q7L2R6;Q14593-2;Q9NV72-2;Q96NJ3-2;B4DX44;P17028;Q6AZW8;Q09FC8-3;Q8N8E2-3;P35789-3;Q14593;P35789;Q3KP31;Q9UL59;Q09FC8;P35789-2;Q96NJ3;P52740-2;P0C7X5;Q9P2F9;Q09FC8-2;Q09FC8-5;Q09FC8-6;P17022;P17022-2;Q3KP31-2;Q09FC8-4;Q6ZN19-3;Q5VIY5-2;Q5VIY5;A0A087WWD1;B7Z6K7;K7ENM7;Q8N3J9;Q9UK12;Q9UK11;Q9UK12-2;Q9NZL3;Q9UJU3-2;Q9UJU3;P59923 Q8N8E2;Q5VIY5-2;A0A087WWD1;K7ENM7;P59923 ZNF513;ZNF160;ZNF841;ZNF45;ZNF229;ZNF233;ZNF844;ZNF28;ZNF816;ZKSCAN5;ZFP28;ZNF441;ZNF665;ZNF226;ZNF16;ZNF534;ZNF616;ZNF267;ZNF235;ZNF888;ZNF225;ZNF132;ZNF234;ZNF701;ZNF765;ZNF273;ZNF285;ZNF736;ZNF24;ZNF660;ZNF415;ZNF93;ZNF791;ZNF214;ZNF806;ZNF319;ZNF18;ZNF468;ZNF814;ZNF664;ZNF222;ZNF223;ZNF224;ZNF112;ZNF445 Zinc finger protein 513;Zinc finger protein 160;Zinc finger protein 841;Zinc finger protein 233;Zinc finger protein 229;Zinc finger protein 844;Zinc finger protein 28;Zinc finger protein 816;Zinc finger protein with KRAB and SCAN domains 5;Zinc finger protein 28 homolog;Zinc finger protein 441;Zinc finger protein 665;Zinc finger protein 226;Zinc finger protein 16;Zinc finger protein 534;Zinc finger protein 616;Zinc finger protein 267;Zinc finger protein 235;Zinc finger protein 888;Zinc finger protein 225;Zinc finger protein 132;Zinc finger protein 234;Zinc finger protein 701;Zinc finger protein 765;Zinc finger protein 273;Zinc finger protein 285;Zinc finger protein 736;Zinc finger protein 24;Zinc finger protein 660;Zinc finger protein 415;Zinc finger protein 93;Zinc finger protein 791;Zinc finger protein 214;Zinc finger protein 806;Zinc finger protein 319;Zinc finger protein 18;Zinc finger protein 468;Putative uncharacterized zinc finger protein 814;Zinc finger protein 664;Zinc finger protein 222;Zinc finger protein 223;Zinc finger protein 224;Zinc finger protein 112;Zinc finger protein 445 1 VHT(1)GEKPYK 110.66 0.00019819 13480000.0 4147.9 3631.5 3366.8 2194.8 5473.9 4345.9 4359.0 3608.5 5724.1 5996.3 6426.0 True False 4847.964113581433 3816.3278386093853 3844.262866192182 2732.5260985283153 4668.6965612314825 4805.780253425058 5150.973876190082 4120.015925567776 4427.600489509393 4641.731665388783 4830.2468514223365 1.0036679827561772 0.7900896074256768 0.7958729614533433 0.565711480713182 0.9665544442840881 0.9949347106369782 1.0663997171642072 0.8529617744804445 0.9166406243203951 0.9609719354243681 1.0 12.237881205032158 -6.89511085454219 22.271666738175114 0.9626521218227314 0.7864981379474254 0.39141099949655456 0.10590944536934101 3.83798437883054 803.2507575420292 0.014944505299191998 0.02824249201006652 1.2731780582705415e-07 6.89511085454219 -0.176153983875306 VHT(ph)GEKPYK ddPTM_A549_PD325901_60min_R1 2 VHTGEKPYK 9 1 Q8N8E2;Q8N8E2-2;M0QZI7;Q9HCG1;A0A494C069;A0A494BZV4;M0QXU9;A0A1W2PPT3;Q6ZN19;K7EPV5;A0A087WVZ7;A0A1W2PNY2;A6NK53;Q9UJW7-2;Q08AG5;P17035-2;A0A3Q5AD24;F8VS19;Q0VGE8;Q9Y2L8;Q8NHY6;Q8N8Z8-2;Q9UJW7;Q9H7R5;Q9NYT6;P17020;Q76KX8;Q08AN1;Q14586;Q14590;Q14590-2;P17035;P0CJ79;Q9UK10;P52740;Q76KX8-2;Q8N8Z8;Q14588;Q9NV72;Q7L2R6;Q14593-2;Q9NV72-2;Q96NJ3-2;B4DX44;P17028;Q6AZW8;Q09FC8-3;Q8N8E2-3;P35789-3;Q14593;P35789;Q3KP31;Q9UL59;Q09FC8;P35789-2;Q96NJ3;P52740-2;P0C7X5;Q9P2F9;Q09FC8-2;Q09FC8-5;Q09FC8-6;P17022;P17022-2;Q3KP31-2;Q09FC8-4;Q6ZN19-3;Q5VIY5-2;Q5VIY5;A0A087WWD1;B7Z6K7;K7ENM7;Q8N3J9;Q9UK12;Q9UK11;Q9UK12-2;Q9NZL3;Q9UJU3-2;Q9UJU3;P59923 Q8N8E2;Q5VIY5-2;A0A087WWD1;K7ENM7;P59923 ZNF513;ZNF160;ZNF841;ZNF45;ZNF229;ZNF233;ZNF844;ZNF28;ZNF816;ZKSCAN5;ZFP28;ZNF441;ZNF665;ZNF226;ZNF16;ZNF534;ZNF616;ZNF267;ZNF235;ZNF888;ZNF225;ZNF132;ZNF234;ZNF701;ZNF765;ZNF273;ZNF285;ZNF736;ZNF24;ZNF660;ZNF415;ZNF93;ZNF791;ZNF214;ZNF806;ZNF319;ZNF18;ZNF468;ZNF814;ZNF664;ZNF222;ZNF223;ZNF224;ZNF112;ZNF445 Zinc finger protein 513;Zinc finger protein 160;Zinc finger protein 841;Zinc finger protein 233;Zinc finger protein 229;Zinc finger protein 844;Zinc finger protein 28;Zinc finger protein 816;Zinc finger protein with KRAB and SCAN domains 5;Zinc finger protein 28 homolog;Zinc finger protein 441;Zinc finger protein 665;Zinc finger protein 226;Zinc finger protein 16;Zinc finger protein 534;Zinc finger protein 616;Zinc finger protein 267;Zinc finger protein 235;Zinc finger protein 888;Zinc finger protein 225;Zinc finger protein 132;Zinc finger protein 234;Zinc finger protein 701;Zinc finger protein 765;Zinc finger protein 273;Zinc finger protein 285;Zinc finger protein 736;Zinc finger protein 24;Zinc finger protein 660;Zinc finger protein 415;Zinc finger protein 93;Zinc finger protein 791;Zinc finger protein 214;Zinc finger protein 806;Zinc finger protein 319;Zinc finger protein 18;Zinc finger protein 468;Putative uncharacterized zinc finger protein 814;Zinc finger protein 664;Zinc finger protein 222;Zinc finger protein 223;Zinc finger protein 224;Zinc finger protein 112;Zinc finger protein 445 1 VHT(1)GEKPYK;VHT(1)GEKPYK 120.57 7.7475e-05 41799000.0 8883.900000000001 7486.6 8214.0 7867.3 8881.8 7808.3 7807.2 7000.0 9211.0 8780.5 8419.0 True False 9785.786988018484 8117.522056224988 8771.451434794573 8353.245253065326 8257.973008546593 7744.711793633619 8104.307268263768 6860.379508606231 8823.893702115332 8226.097731510496 7383.516372438155 1.3253559001436956 1.0994113978709108 1.1879775153661778 1.1313369987567254 1.1184336286396936 1.0489191603263408 1.0976216289729166 0.9291480051720701 1.1950801294426523 1.114116542385902 1.0 12.85009234280077 -2.00000000028002 0.589696024164576 1.0805550552115673 13.700256266537808 0.4671774721460592 0.07263450967659099 122.3713508808887 0.8960852791367315 0.014486900037835877 1990.6015181709963 0.0099999999935523 2.00000000028002 12.619701211326241 VHT(ph)GERPYK ddPTM_A549_PD325901_60min_R1 1 VHTGERPYK 9 1 Q9P2Y4;F5H290;F5H435;M0R230;Q8NEK5-2;P17097-2;P17097;Q9Y2P7;Q96PQ6;Q96SQ5;Q8TAU3;Q96SQ5-2;Q8NEK5;Q8TAU3-2;Q96PQ6-4;Q3SY52;Q96PQ6-3;Q15928;Q9Y2P7-2;Q9C0F3;Q13106;Q3SY52-2;Q3SY52-3;Q96PQ6-2;S4R3B8;Q3KQV3;Q16600 Q9P2Y4;S4R3B8;Q16600 ZNF219;ZNF7;ZIK1;ZNF417;ZNF548;ZNF256;ZNF317;ZNF587;ZNF141;ZNF436;ZNF154;ZNF792;ZNF239 Zinc finger protein 219;Zinc finger protein 548;Zinc finger protein 7;Zinc finger protein 256;Zinc finger protein 317;Zinc finger protein 587;Zinc finger protein 417;Zinc finger protein interacting with ribonucleoprotein K;Zinc finger protein 141;Zinc finger protein 436;Zinc finger protein 154;Zinc finger protein 792;Zinc finger protein 239 1 VHT(1)GERPYK 53.568999999999996 0.009914 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VHT(ph)PHLDR ddPTM_A549_MK2206_60min_R1 2 VHTPHLDR 8 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 VHT(1)PHLDR;VHT(1)PHLDR 107.95 0.0015921 287170000.0 4041.3999999999996 3577.0 3004.2 1375.54 4914.8 4041.3999999999996 3983.2 4212.6 5660.7 5912.1 6548.8 True False 4723.489517256443 3759.0540213977038 3430.240733816846 1712.5473617503376 4191.83943059619 4469.058265535798 4706.89588062407 4809.748950546438 4378.560488280393 4576.552503868226 4922.552222314748 0.959561078061108 0.7636392366458372 0.6968419183583252 0.34789826179742195 0.8515581432724847 0.9078742212783062 0.9561901363457208 0.9770843930802899 0.8894899008753324 0.9297113158336752 1.0 12.265190796116467 -6.989897870837964 24.99984373819609 0.9445394424360327 0.6852349312367598 0.42603848455068427 0.13624785915617302 153.42273591386524 379673.9387383952 0.019747244321437023 0.037289969079890635 1.0235336592688256e-07 6.989897870837964 -0.2593045111992729 VHT(ph)PHLDR ddPTM_A549_PD325901_60min_R1 2 VHTPHLDR 8 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 VHT(1)PHLDR;VHT(1)PHLDR 97.456 0.0021896 339350000.0 7466.299999999999 6593.2 7219.0 7342.200000000001 7502.6 6590.1 7064.4 7078.5 8181.299999999999 8234.599999999999 9389.5 True False 8224.273279600447 7148.8321028374085 7708.92475137351 7795.71101865396 6975.643258564895 6536.432410540694 7333.239607788008 6937.313764524176 7837.46841223713 7714.665950674375 8234.651024944535 0.9987397467952618 0.8681402625541815 0.9361568241351714 0.9466959795914933 0.8471085462436923 0.793771635341975 0.8905343511915735 0.8424538870572117 0.9517669162294489 0.9368540242087962 1.0 13.007491796149857 -9.003460085156142 3.238296944862041 0.9808140521021903 0.8884913602430999 0.24069186140514487 0.055503412698413086 0.18683037953041592 3.9954433715275717 0.010248381659195092 0.010367217626736881 9.920645130443289e-10 9.003460085156142 -0.09232269185909037 VHTVVDRPQQPMTHR ddPTM_A549_PD325901_60min_R1 1 VHTVVDRPQQPMTHR 15 1 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 0 47.037 0.0063647 4120000.0 420.97 503.32 336.32 223.77 702.67 418.91 331.53 465.51 433.39 425.44 642.28 False True 463.7065644982652 545.7365428016935 359.14469765645373 237.59176468145733 653.3168832799016 415.4985358491678 344.1465555701771 456.2250378644697 415.1761254543224 398.5776457939553 563.283631748376 0.8232203784423248 0.9688485729787353 0.637591219438961 0.4217977432505828 1.1598364419929466 0.7376364453543625 0.610964949402099 0.809938390093802 0.7370640687102114 0.7075967120805733 1.0 9.137717739217367 -10.72242122797922 0.8468253311178197 1.0088585844522453 0.7651529277224157 0.0 0.20060238056407614 0.9165982391243199 1.099401420653384 0.14590796370867065 0.03275718387472276 1.8948671728343924e-11 10.72242122797922 -0.24370565672982958 VHVGDEDFVHLR ddPTM_A549_MK2206_60min_R1 2 VHVGDEDFVHLR 12 0 P04080 P04080 CSTB Cystatin-B 0 ; 149.23 4.2025e-12 7589300.0 0.0 113.46 288.37 91.851 313.64 286.14 104.55 94.081 301.08000000000004 0.0 281.72 False True 0.0 119.2346293731573 329.26520218719253 114.35449912334803 267.50397147639563 316.4191448756405 123.5453816828798 107.41726986097876 232.8858607259636 0.0 211.7611489235449 0.0 0.5630618740938464 1.554889571864156 0.5400164274922546 1.263234416871134 1.4942266156190989 0.5834185463712473 0.5072567390525499 1.0997572591091562 0.0 1.0 7.7262941171753585 -5.509608081050956 5.389474322087579 1.018895563376716 0.11052813913403291 0.20966336544456698 0.4587555022029523 0.10428720490284751 9.578832910160251 0.04390102456488907 0.2210117254685137 3.0930854564213856e-06 5.509608081050956 -0.9083674242426831 VHVGDEDFVHLR ddPTM_A549_PD325901_60min_R1 2 VHVGDEDFVHLR 12 0 P04080 P04080 CSTB Cystatin-B 0 ; 139.86 4.9383e-09 9958200.0 368.48 325.09 307.541 453.18 479.15999999999997 330.8 236.15 512.93 352.22 349.53999999999996 346.7 False True 405.8878183393613 352.486475203454 328.412581654268 481.1718993535452 445.5054546122616 328.10607447639035 245.13681747623846 502.69920876419917 337.41741827804395 327.46998474713035 304.0580979123779 1.3349021819386906 1.159273433674613 1.0800981256842188 1.5824998664965904 1.4651984527662387 1.079090071039458 0.8062170327293203 1.6532998535992447 1.1097136389219913 1.07699807041975 1.0 8.248203202791746 -7.288767735180786 23.11378042775102 1.084378782515765 1.3159881916984093 0.15218165880980095 0.23016650100426556 371.5464287250953 314245.6693672816 0.03472840271186231 0.05552963283949053 5.143186405428287e-08 7.288767735180786 0.2316094091826444 VHVQFFDDS(ph)PTR ddPTM_A549_MK2206_60min_R1 6 VHVQFFDDSPTR 12 0 P52701;P52701-2;A0A087WWJ1;F8WAX8;A0A494C0M1;C9J7Y7;C9J8Y8;C9JH55 P52701 MSH6 DNA mismatch repair protein Msh6 1 VHVQFFDDS(0.97)PT(0.03)R;VHVQFFDDS(0.833)PT(0.167)R;VHVQFFDDS(0.986)PT(0.014)R;VHVQFFDDS(0.993)PT(0.007)R;VHVQFFDDS(0.881)PT(0.119)R;VHVQFFDDS(0.999)PT(0.001)R 182.55 3.8415e-19 140103600.0 6220.65 7078.1900000000005 5820.799999999999 5274.77 10950.04 6899.5199999999995 6516.01 7310.04 11404.98 9563.21 9168.98 True False 7270.543639709326 7438.439637606102 6646.276966713631 6567.088886793423 9339.303621430281 7629.6226268692835 7699.8846724004015 8346.260556058602 8821.770240010628 7402.874219062206 6892.069215025572 1.054914484007014 1.079275237310353 0.964336944298806 0.9528472047953825 1.355079777938015 1.1070148004659839 1.1172094232039473 1.210994883490536 1.2799886311034234 1.0741148975873624 1.0 12.750721474859994 VHVQFFDDS(ph)PTR ddPTM_A549_PD325901_60min_R1 5 VHVQFFDDSPTR 12 0 P52701;P52701-2;A0A087WWJ1;F8WAX8;A0A494C0M1;C9J7Y7;C9J8Y8;C9JH55 P52701 MSH6 DNA mismatch repair protein Msh6 1 VHVQFFDDS(0.97)PT(0.03)R;VHVQFFDDS(0.997)PT(0.003)R;VHVQFFDDS(0.987)PT(0.013)R;VHVQFFDDS(0.933)PT(0.067)R;VHVQFFDDS(0.873)PT(0.127)R 196.74 4.0248999999999994e-57 218580000.0 8946.789999999999 8779.13 9076.58 10273.999999999998 11277.81 10631.45 9563.039999999999 11296.819999999998 10412.650000000001 9924.779999999999 9646.599999999999 True False 9855.061534521305 9518.978095459417 9692.571300709487 10908.601646053057 10485.695531932353 10544.87099604601 9926.966720296277 11071.49606291615 9975.042531465773 9298.127697026446 8460.129354835717 1.1648830793453837 1.1251575119260409 1.1456764895881077 1.2894131033372227 1.239424965286003 1.2464195940477762 1.1733823803322974 1.3086674681383925 1.1790650134402672 1.0990526630318884 1.0 13.04646400689068 -10.239482630058493 0.7894651030655371 1.0059955849136013 1.2097776684713981 0.47147383683096244 0.06194966663359123 0.29871478023840786 0.35738361858554224 0.03290264907320743 0.011964435028400874 5.7612586069554104e-11 10.239482630058493 0.2037820835577968 VHYRS(ph)PPLATGYR ddPTM_A549_MK2206_60min_R1 3 VHYRSPPLATGYR 13 1 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 VHY(0.022)RS(0.975)PPLAT(0.003)GY(0.001)R;VHYRS(1)PPLATGYR;VHYRS(1)PPLATGYR 138.19 4.2347e-09 37658000.0 2002.8999999999999 2521.89 2107.02 1756.3799999999999 2721.04 2493.97 1840.75 1907.2400000000002 3062.16 2669.22 2954.7799999999997 True False 2340.94055379644 2650.2434291368895 2405.827119022292 2186.693178846893 2320.7786205398907 2757.8802500366983 2175.190447946064 2177.597110677536 2368.585649264701 2066.2413481461986 2221.026578220618 1.0539903379597966 1.1932515599431233 1.0832050109682738 0.9845416530759252 1.0449125838013111 1.2417142041794846 0.9793626376541268 0.980446218893123 1.0664373278964991 0.9303091500154734 1.0 11.117010941859297 -2.0000029471098055 0.0501825028388235 0.8743157336187801 1.4325798272899084 0.20696662996168158 0.08038156568464222 572.1439435534679 2.1075011732147098 5.4345397565759175 24.52601711184747 0.00999993214051919 2.0000029471098055 0.5582640936711283 VHYRS(ph)PPLATGYR ddPTM_A549_PD325901_60min_R1 4 VHYRSPPLATGYR 13 1 Q86U06-3;Q86U06-5;Q86U06-2;Q86U06 Q86U06-3 RBM23 Probable RNA-binding protein 23 1 VHY(0.001)RS(0.999)PPLATGYR;VHY(0.002)RS(0.988)PPLAT(0.005)GY(0.005)R;VHY(0.002)RS(0.996)PPLAT(0.001)GYR;VHY(0.003)RS(0.997)PPLATGYR 109.07 2.8196e-05 102476000.0 6491.960000000001 6752.1 6654.86 6447.01 7571.919999999999 6758.33 6259.43 6706.7 7304.57 7353.09 7618.96 True False 7151.0190000716475 7321.123163497011 7106.498818524102 6845.227165477953 7040.094460905911 6703.292401197168 6497.636033941524 6572.92960719563 6997.584325226422 6888.814642513808 6681.87622056674 1.0702112346919703 1.0956687795207394 1.0635484082525173 1.0244468678435588 1.0536104274479943 1.003205114839528 0.9724268782384614 0.9836952062901474 1.04724842158673 1.0309701070651556 1.0 12.706037542158594 -6.296032635305413 1.3076599438598924 1.0154926696002156 1.0856727681894118 0.5864168308205493 0.023746451456572153 0.31942982484983806 0.9927660498068833 0.0041849657059053625 0.017708688070264527 5.057866529498301e-07 6.296032635305413 0.07018009858919627 VIAHTQMR ddPTM_A549_MK2206_60min_R1 2 VIAHTQMR 8 0 P39023;G5E9G0;B5MCW2;H7C422;H7C3M2 P39023 RPL3 60S ribosomal protein L3 0 ; 69.423 0.0076040000000000005 3202000.0 879.46 930.65 652.76 598.13 921.4 768.03 726.05 835.48 936.53 983.6500000000001 1141.49 False True 1027.8913472673698 978.016109872456 745.3311834785582 744.6718768510757 785.8632805711991 849.3024248229467 857.963886856575 953.9118485501906 724.4074503310961 761.4427818254054 858.026529478693 1.1979715218035052 1.1398436718112488 0.868657504018431 0.8678891051346773 0.9158962497915563 0.9898323602406015 0.9999269922083225 1.111750995776033 0.8442716226632536 0.8874350100666835 1.0 9.744878445140154 -5.6631124642200765 5.561869443966319 0.9392485466850321 1.181775763539815 0.5734200574837154 0.07555600755374858 0.11450071885572095 5.2462508655581646 0.011629793680660288 0.046882518983195405 2.1721386124069813e-06 5.6631124642200765 0.24252721685478285 VIAHTQMR ddPTM_A549_PD325901_60min_R1 2 VIAHTQMR 8 0 P39023;G5E9G0;B5MCW2;H7C422;H7C3M2 P39023 RPL3 60S ribosomal protein L3 0 ; 57.047 0.01882 3621900.0 904.3399999999999 963.97 1055.58 637.4100000000001 938.4300000000001 1139.97 975.6300000000001 907.66 947.44 1119.0500000000002 1297.48 False True 996.1479310600783 1045.207134953009 1127.2180065181942 676.781368036858 872.5179142077484 1130.6864622758492 1012.7581335352212 889.5560092545044 907.622391611351 1048.3929920217317 1137.8981854033802 0.8754279986016043 0.9185418769100923 0.9906141173066376 0.5947644321068513 0.7667803019638741 0.9936622421759338 0.890025264585691 0.7817536056085373 0.7976305817638707 0.9213416503077388 1.0 10.152155761476276 -10.855284174991038 1.082741375494486 1.000708744683118 0.8428905940392886 0.12877351090075428 0.10952443429069972 0.652478262622356 1.3482704342204432 0.07822468878681046 0.01871947546613243 1.3954549643018748e-11 10.855284174991038 -0.15781815064382942 VIAIDS(ph)DAES(ph)PAKR ddPTM_A549_PD325901_60min_R1 1 VIAIDSDAESPAKR 14 1 P28749 P28749 RBL1 Retinoblastoma-like protein 1 2 VIAIDS(1)DAES(1)PAKR 46.663000000000004 0.0082258 8649300.0 2460.7 3224.7 3189.7 3155.1 3620.8 3393.1 3526.7 3240.1 3667.4 3724.9 3711.2 True False 2710.508452528401 3496.456786085634 3406.172223224279 3349.9833612480056 3366.4874990818876 3365.46771857872 3660.910498384288 3175.4736636907214 3513.271931727042 3489.709178304587 3254.745927235119 0.8327864948988374 1.074264125143509 1.0465247670246862 1.0292610963012374 1.0343318877555805 1.034018566677387 1.1247914830311203 0.9756441008555963 1.0794304717700467 1.0721909655384583 1.0 11.668329212438747 -5.255823800192149 24.829917130776238 1.041106695564603 0.8327863967274617 0.7115093882645225 0.0390552414384241 233.28004767631248 1031439.4185379745 0.005356401341599521 0.06483075945740015 5.548507786104732e-06 5.255823800192149 -0.2083202988371412 VIAIDSDAES(ph)PAKR ddPTM_A549_MK2206_60min_R1 4 VIAIDSDAESPAKR 14 1 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 VIAIDSDAES(1)PAKR;VIAIDSDAES(1)PAKR;VIAIDSDAES(1)PAKR;VIAIDS(0.012)DAES(0.988)PAKR 203.53 4.9522e-32 243711000.0 17055.4 19305.4 20044.699999999997 17394.1 23761.100000000002 19379.8 19081.3 17720.7 25957.8 26122.600000000002 26422.2 True False 19933.93455550441 20287.962399969598 22887.33986989497 21655.655280850824 20265.873666138836 21430.557572729915 22548.12521765217 20232.663492367712 20078.3997460888 20221.486517066372 19860.838524377705 1.0036804101215053 1.021505832951999 1.1523853759649907 1.090369636421449 1.0203936576627406 1.0790358899713874 1.1353058024199745 1.0187215140757335 1.0109542817864439 1.0181587495536002 1.0 14.277638914269891 -8.496708649573204 23.46554957537911 1.0056815345809247 1.0723481378369764 0.3034566482060591 0.04364563380679036 294.4200188368821 263993.458096405 0.007172505992980223 0.008652618849345534 3.1863343864551233e-09 8.496708649573204 0.06666660325605167 VIAIDSDAES(ph)PAKR ddPTM_A549_PD325901_60min_R1 2 VIAIDSDAESPAKR 14 1 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 VIAIDSDAES(1)PAKR;VIAIDSDAES(1)PAKR 171.78 5.555399999999999e-23 441460000.0 14038.4 14317.0 14477.900000000001 14455.199999999999 16937.3 16166.2 14608.7 15690.9 15598.900000000001 14980.3 16436.5 True False 15463.568033476138 15523.543835515864 15460.457356685212 15348.064873858884 15747.682478512927 16034.547827086535 15164.64207268737 15377.932690227086 14943.332479635972 14034.441301446008 14414.914699558118 1.0727478001621589 1.0769084770228803 1.072532004449471 1.0647350465646093 1.092457555714545 1.1123581485763538 1.0520105313666708 1.066807054411393 1.0366577112033866 0.9736055740847518 1.0 13.815274679241194 -9.093093722082072 0.7511844743006496 1.006794185996111 1.0804028716619571 0.7781286580992279 0.01796570828224325 0.1775773909206177 0.21539218228768148 0.004635556817065479 0.0038717905260892446 8.070608452473599e-10 9.093093722082072 0.07360868566584622 VIAINVDDPDAANYNDINDVKR ddPTM_A549_MK2206_60min_R1 1 VIAINVDDPDAANYNDINDVKR 22 1 Q15181 Q15181 PPA1 Inorganic pyrophosphatase 0 52.853 0.0085696 1908500.0 721.98 816.19 1228.7 1038.0 1317.5 961.92 1380.7 935.22 1588.0 1298.7 1569.9 False True 843.8325732837149 857.7305847706442 1402.9481358234325 1292.3100465975913 1123.697495281697 1063.7097359291818 1631.5553179297187 1067.7902989911302 1228.3205355149123 1005.3227680136779 1180.0505029641954 0.7150817453694336 0.726859217140361 1.1888882147834652 1.0951311349399102 0.9522452576894429 0.9014103491818574 1.3826148235447366 0.9048683054741502 1.0409050565458566 0.8519319855280643 1.0 10.204632889009254 -5.742189341791237 24.607560841767263 1.0374672431473846 0.7209700320281345 0.41849291897949015 0.14290663142389437 123.62514528450107 158028.4300411522 0.01659012860270663 0.06403714113650802 1.8105505646812672e-06 5.742189341791237 -0.3164972111192501 VIAINVDDPDAANYNDINDVKR ddPTM_A549_PD325901_60min_R1 2 VIAINVDDPDAANYNDINDVKR 22 1 Q15181 Q15181 PPA1 Inorganic pyrophosphatase 0 ; 81.12 9.5936e-05 6528800.0 3653.2999999999997 3522.1 3754.5 3654.1 5114.2 3989.8 3907.9 4368.3 4337.5 4498.1 4619.2 False True 4024.180326582683 3818.9197278110246 4009.3029476425872 3879.805457936777 4754.996235032196 3957.3083916139753 4056.617272984935 4281.170829634944 4155.209959062562 4214.089198349452 4051.067683521358 0.9933628961451211 0.9426946242703749 0.9896904374003282 0.9577241757077452 1.1737637103359757 0.9768556589936105 1.0013699078606242 1.0568006175383302 1.0257073649904263 1.0402416171645863 1.0 11.984086473824894 VIDDTNITR ddPTM_A549_MK2206_60min_R1 4 VIDDTNITR 9 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 168.26 6.0687e-07 108622000.0 20273.0 20839.1 19824.1 19080.6 24836.8 20664.0 19787.8 20714.8 28655.3 26973.9 26752.7 False True 23694.58677273713 21899.721179007247 22635.45547275765 23755.347856560686 21183.33962111001 22850.650764346927 23382.987122568036 23651.18633641439 22164.92030311114 20880.477255812846 20109.26625304176 1.1782919612570673 1.0890363130825154 1.1256231424820773 1.1813135077948165 1.0534118626981621 1.1363244425136845 1.1627966345629885 1.1761337305301667 1.1022242196310092 1.0383510264903093 1.0 14.29557282109275 -10.03527169199949 0.7503768976107641 1.0053011696841467 1.1346736798685506 0.5493781637863415 0.039807072909615084 0.29827346657131093 0.3360181834450015 0.019283646879387998 0.008112436723012305 9.219944525481467e-11 10.03527169199949 0.12937251018440388 VIDDTNITR ddPTM_A549_PD325901_60min_R1 2 VIDDTNITR 9 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 136.57 0.00012306 153573000.0 11748.5 11398.1 11819.4 11387.099999999999 13528.4 12680.1 12142.8 13293.8 13442.1 14396.7 16717.0 False True 12941.199071211418 12358.657888635431 12621.53555982602 12090.455305019539 12578.21185444636 12576.837469673757 12604.900898795117 13028.644730215647 12877.17528316193 13487.689905043808 14660.914977794117 0.8827006425460189 0.842966343325382 0.8608968525459014 0.824672629459493 0.8579418046893877 0.8578480598736867 0.8597622261562049 0.8886651856278576 0.878333671715995 0.9199759991428016 1.0 13.839687523453236 -10.606441930817324 0.4121717784386438 1.0373371980442503 0.8501980568154658 0.62282184806765 0.02762989895734139 0.34138213297822345 0.07871699448612926 0.02721805362596106 0.00424839866094974 2.474902356510729e-11 10.606441930817324 -0.1871391412287845 VIDLPPTHKPPPLYEERS(ph)PPLPQK ddPTM_A549_MK2206_60min_R1 3 VIDLPPTHKPPPLYEERSPPLPQK 24 2 Q9NQS3-3 Q9NQS3-3 PVRL3 Nectin-3 1 VIDLPPTHKPPPLYEERS(1)PPLPQK;VIDLPPTHKPPPLYEERS(1)PPLPQK;VIDLPPTHKPPPLYEERS(1)PPLPQK 159.59 3.6035e-34 51830500.0 7633.9 8044.299999999999 8595.5 6892.299999999999 10604.2 8311.8 7774.2 8216.2 12148.8 11374.6 11967.099999999999 True False 8922.315689064177 8453.720510016645 9814.47114956484 8580.913809407102 9044.336227298803 9191.349159073692 9186.671509125239 9380.871511057216 9397.116197647081 8805.069959997212 8995.338794842231 0.9918821172338806 0.9397890065979349 1.0910618680857562 0.9539289186447593 1.005446980216539 1.0217902147658795 1.0212702065643946 1.0428591657310387 1.0446650662046462 0.9788480635155047 1.0 13.1349619039303 -7.171452200730617 4.19713005417026 1.0234727604037326 0.9954992856115609 0.06439590561012487 0.03975372651235909 0.41611623110087537 13.251416248359643 0.005452219171213166 0.009621569064419947 6.73826053955249e-08 7.171452200730617 -0.027973474792171715 VIDLPPTHKPPPLYEERS(ph)PPLPQK ddPTM_A549_PD325901_60min_R1 4 VIDLPPTHKPPPLYEERSPPLPQK 24 2 Q9NQS3-3 Q9NQS3-3 PVRL3 Nectin-3 1 VIDLPPTHKPPPLYEERS(1)PPLPQK;VIDLPPT(0.01)HKPPPLYEERS(0.99)PPLPQK;VIDLPPTHKPPPLYEERS(1)PPLPQK;VIDLPPTHKPPPLYEERS(1)PPLPQK 199.8 6.520599999999998e-62 106755200.0 26026.8 25203.4 27075.500000000004 27325.0 34506.6 29476.8 29329.0 29407.8 32745.600000000002 29988.899999999998 30815.4 True False 28669.021576082494 27327.37896934 28913.00624820798 29012.80319042239 32082.97545730752 29236.750713801903 30445.131144444607 28821.23835902719 31369.41630789144 28095.39573606229 27025.30115491515 1.0608215394805471 1.0111775929042668 1.0698495488532054 1.0735422715223202 1.1871458998144233 1.0818288590462035 1.1265417902256192 1.0664539201179415 1.1607425252386583 1.0395960279966214 1.0 14.722023074189554 -5.995695681036966 3.610307382814103 1.0883693172189577 1.0359745478496436 0.1466576088457262 0.05108016770698952 0.43096486942153356 12.131065771577774 0.009059328792342253 0.029509731263674076 1.0099603379036455e-06 5.995695681036966 -0.05239476936931409 VIDPATATSVDLR ddPTM_A549_PD325901_60min_R1 2 VIDPATATSVDLR 13 0 P50991;P50991-2 P50991 CCT4 T-complex protein 1 subunit delta 0 ; 128.01 1.4708e-07 7518800.0 4131.9 4487.3 4772.4 5205.9 5742.4 5348.799999999999 4638.4 5565.6 5049.1 5158.4 5797.6 False True 4551.367446255985 4865.46051918072 5096.283762772535 5527.456619543271 5339.073634204544 5305.241146188989 4814.916850229869 5454.589741871262 4836.90388571822 4832.697743661951 5084.531954014427 0.8951399042074091 0.9569141394301315 1.0023112862431376 1.0871121805379034 1.0500619688286443 1.043407966391145 0.9469734665406739 1.072781091987171 0.9512977653526801 0.9504705226301815 1.0 12.311899260573654 -5.427259531019232 2.7123647913595352 0.9987161611703776 0.891541762984463 0.3277079811624628 0.04793640394924692 0.34479086080556887 4.065477658812463 0.0070276603933875515 0.06846263727041889 3.738870894688224e-06 5.427259531019232 -0.10717439818591468 VIEDNEY(ph)TAR ddPTM_A549_MK2206_60min_R1 2 VIEDNEYTAR 10 0 P07948-2;P07948;H0Y3C5;J3KPD6;P08631-3;P08631-2;P08631-4;P08631 P07948-2 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK 1 VIEDNEY(1)TAR;VIEDNEY(1)TAR 192.64 8.8418e-15 29817000.0 3674.1000000000004 5148.3 3609.5 3048.0 5160.6 4521.3 3837.7 3165.2 5484.4 6307.7 5698.299999999999 True False 4294.198256879272 5410.326479832766 4121.381375644732 3794.7601368299183 4401.482576205481 4999.740965003957 4534.9604140065785 3613.8767930184626 4242.192156787148 4882.786189112096 4283.254844920615 1.0025549289862203 1.263134386283065 0.9622078360647057 0.8859524530346383 1.02760231075792 1.1672760893349603 1.0587650229087942 0.8437221047690058 0.9904132045324918 1.139970972052351 1.0 12.064491801854931 VIEDNEY(ph)TAR ddPTM_A549_PD325901_60min_R1 2 VIEDNEYTAR 10 0 P07948-2;P07948;H0Y3C5;J3KPD6;P08631-3;P08631-2;P08631-4;P08631 P07948-2 LYN;HCK Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK 1 VIEDNEY(1)TAR;VIEDNEY(1)TAR 227.27 4.3491000000000004e-35 39403000.0 6452.200000000001 6117.0 5789.3 5769.1 7056.0 5866.299999999999 5761.5 6030.1 6283.8 5904.8 6515.6 True False 7107.222594141404 6632.5010576133645 6182.196711888995 6125.444204423269 6560.410901878536 5818.5267977655685 5980.757035313775 5909.824924978064 6019.713738503129 5531.969920280525 5714.222505791433 1.2437777120051152 1.1607005241555164 1.0818963919629074 1.0719645932959485 1.148084607351128 1.0182534530057976 1.0466440586190346 1.0342308020012145 1.0534615570888388 0.9681054447343986 1.0 12.480341499051866 -2.0000000000000075 0.3153943505637254 1.0198319559937932 3.0268962815831326 0.789395041623522 0.0351222055088114 15.094912496697177 0.18859833314353436 0.009845440945518221 17.680424210057282 0.009999999999999827 2.0000000000000075 2.0070643255893392 VIET(ph)PENDFK ddPTM_A549_MK2206_60min_R1 2 VIETPENDFK 10 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VIET(1)PENDFK;VIET(1)PENDFK 147.58 3.6949e-08 42551000.0 10743.0 12870.1 10680.7 10269.900000000001 15184.4 12490.6 10987.1 12691.8 15759.900000000001 14925.6 14755.4 True False 12556.155758867215 13525.133117358288 12195.383864482248 12786.025961033327 12950.794874653047 13812.347001410762 12983.313850674016 14490.901517007369 12190.307813388838 11553.896593720609 11091.226951677108 1.1320799595547537 1.2194442667421161 1.0995522783561993 1.1528053674079717 1.1676611551704614 1.2453398583934119 1.1705931099634386 1.3065192498667781 1.099094614734715 1.0417149197342446 1.0 13.437131350025446 -9.322519502821567 1.6012305166893088 1.0289355018616466 1.1835483260808362 0.5357981135082422 0.0576720740124244 0.17381548556029824 0.9189651163676539 0.01298811075987927 0.011257517045620538 4.758614210447866e-10 9.322519502821567 0.15461282421918954 VIET(ph)PENDFK ddPTM_A549_PD325901_60min_R1 4 VIETPENDFK 10 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VIET(1)PENDFK;VIET(1)PENDFK;VIET(1)PENDFK;VIET(1)PENDFK 107.79 0.00027242 71963700.0 33833.6 34014.299999999996 33520.9 34435.2 38124.1 33310.3 32647.3 34088.3 34973.6 36746.2 38142.0 True False 37268.36216502011 36880.804434196216 35795.82985154679 36562.184095986595 35446.394737005 33039.03196079477 33889.71086678803 33408.38211474599 33503.78121597013 34426.03866085428 33450.775802059165 1.1141254954907784 1.1025395839078238 1.0701046236823981 1.0930145331258923 1.059658375242316 0.9876910525573206 1.0131218201732064 0.9987326545858298 1.0015845795094445 1.0291551641303065 1.0 15.029752050290757 -7.060360937392973 2.9080086138065693 1.000776379445666 1.0936405118385017 0.8937625350820212 0.01450469904756861 0.04536789574937757 0.7582139437038071 0.001698212300017728 0.003202737378040821 8.702400423522143e-08 7.060360937392973 0.09286413239283564 VIET(ph)PENDFKHHR ddPTM_A549_MK2206_60min_R1 2 VIETPENDFKHHR 13 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VIET(1)PENDFKHHR;VIET(1)PENDFKHHR 120.53 5.8572000000000004e-06 16142900.0 1723.15 1500.9099999999999 1750.72 1506.1100000000001 2618.0 2162.5 2033.37 1396.5300000000002 3164.8 2266.8 2886.9 True False 2013.9755930272768 1577.2999080950597 1998.9984213793439 1875.1070176118465 2232.8956680436295 2391.3343146486754 2402.8070086323987 1594.4924041937552 2447.9778531471006 1754.7283056390272 2170.0030556133097 0.9280980447550868 0.7268652935833153 0.9211961320553834 0.8641033996525335 1.0289827298941496 1.101995828283666 1.1072827765918936 0.7347880916891624 1.1280988046605431 0.8086294169494093 1.0 11.083481358813438 -6.761935204621469 4.707957115188593 1.042240981301764 0.8528633858419646 0.09379964290766474 0.13220744481501112 0.1565914463863556 8.84722829144416 0.016273419518444392 0.03305528354470364 1.730074461659801e-07 6.761935204621469 -0.18937759545979926 VIET(ph)PENDFKHHR ddPTM_A549_PD325901_60min_R1 2 VIETPENDFKHHR 13 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VIET(1)PENDFKHHR;VIET(1)PENDFKHHR 115.82 1.0022e-05 15103900.0 3211.7 2882.9 2814.4 3488.5 3640.7 3468.0 3712.7 3860.6000000000004 3912.3 3619.8 4290.9 True False 3537.7494196714238 3125.8521005384287 3005.402108362046 3703.976722041665 3384.989791733161 3439.757757811734 3853.9888301673955 3783.597304417891 3747.8796363897336 3391.245210241068 3763.146502256194 0.9401040904334622 0.8306485274129839 0.7986407402848009 0.9842765143001865 0.8995104999775296 0.9140642692888591 1.0241399923858232 1.005434495348357 0.9959430583270391 0.901172784053942 1.0 11.877723740415016 -7.172068976673098 0.9337841269199652 1.0007105141102834 0.8657853516732166 0.36240865985293247 0.056778397198412434 0.29030983487015655 0.49560790339183713 0.00793372685295767 0.019958624742420668 6.72869779483767e-08 7.172068976673098 -0.13492516243706687 VIFGT(ph)PR ddPTM_A549_PD325901_60min_R1 1 VIFGTPR 7 0 A0A1C7CYW6;A0A1B0GWB1;A0A1B0GTQ2;P0DI83 A0A1C7CYW6 RAB34 Ras-related protein Rab-34, isoform NARR 1 VIFGT(1)PR 57.281000000000006 0.037679000000000004 1707100.0 610.83 452.55 626.28 619.13 630.11 762.27 784.48 752.26 720.02 785.56 659.54 True False 672.8410119307206 490.68797672436347 668.7831269275802 657.3722539537501 585.8532473614908 756.0623258498133 814.3338156839278 737.2555841634464 689.7600633369971 735.9596075354913 578.4207611685309 1.1632380044095254 0.8483235901371713 1.156222549094708 1.1364949152684642 1.012849618637382 1.3071147797710603 1.407857169647236 1.274600833265452 1.1924884264934361 1.2723602901954953 1.0 9.175975525427075 VIFLENYR ddPTM_A549_MK2206_60min_R1 2 VIFLENYR 8 0 P11216;H0Y4Z6;P11217-2;P11217;E9PK47;P06737-2;P06737 P11216 PYGB;PYGM;PYGL Glycogen phosphorylase, brain form;Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, liver form 0 ; 79.116 0.011508 1649710.0 1549.91 1335.08 1437.48 1658.94 2153.1000000000004 1431.43 1453.31 1301.24 1990.79 1994.4699999999998 2275.5 False True 1811.496916338629 1403.029869412259 1641.3362792247651 2065.3803744726456 1836.3818421943226 1582.902972493667 1717.3576150506553 1485.694754880369 1539.8792436383706 1543.917841780426 1710.4305493948827 1.059088261127879 0.8202787712769886 0.9596041650480566 1.2075207468688731 1.0736371861716332 0.9254412422963724 1.0040498958921327 0.8686086409097282 0.9002875002338739 0.9026486590330337 1.0 10.740143810528934 -7.278670826138037 24.452172107446927 0.9473361011091385 1.019321730606109 0.17414005194032234 0.09535225800206121 1116.7945315927686 1584777.5355596445 0.01512944187383489 0.024226441072790306 5.264161127469459e-08 7.278670826138037 0.07198562949697063 VIFLENYR ddPTM_A549_PD325901_60min_R1 2 VIFLENYR 8 0 P11216;H0Y4Z6;P11217-2;P11217;E9PK47;P06737-2;P06737 P11216 PYGB;PYGM;PYGL Glycogen phosphorylase, brain form;Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, liver form 0 ; 89.29799999999999 0.007378699999999999 3450200.0 2455.3 2724.3 2434.8 2318.0 2623.5 2874.2 2713.2 3033.9 2890.7 2744.8 2723.3999999999996 False True 2704.560248503672 2953.886321931683 2600.0401696418107 2461.177595440041 2439.2344105836637 2850.7934681379743 2816.4523107200075 2973.3864844514933 2769.2139316800335 2571.4928595695005 2388.439065055002 1.1323547198979473 1.236743430112863 1.0885938886541933 1.0304544216552427 1.0212671724691842 1.1935801544396214 1.1792020788502506 1.2449078261843873 1.1594241495192856 1.0766416012837585 1.0 11.221852355247961 -10.654345002407357 1.0045067770551728 1.0028096556537727 1.1422485376578018 0.2117120249660649 0.07317544165691106 0.4929420917938307 0.9117296263483501 0.04656071202394383 0.013489932551493063 2.2164349900613698e-11 10.654345002407357 0.1394388820040291 VIGSGCNLDSAR ddPTM_A549_PD325901_60min_R1 2 VIGSGCNLDSAR 12 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50;F5H5G7;F5H155;A0A087WUM2;G3XAP5;F5H245;Q6ZMR3;P07864;P00338;P00338-3;P00338-5;P00338-2;P00338-4 A0A5F9ZHM4;P00338 LDHB;LDHC;LDHAL6A;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain 0 ; 130.95 1.9076e-07 11616000.0 8914.4 10474.0 9777.1 10820.0 11120.0 9630.1 9180.1 11241.0 11625.0 10638.0 11963.0 False True 9819.383325565574 11356.680738506198 10440.632800478446 11488.326825997085 10338.969561917418 9551.675658449483 9529.45372904347 11016.789436606094 11136.441677026458 9966.314864507567 10491.626839705154 0.9359257125314923 1.082451836308863 0.9951395488987731 1.0949995650359923 0.9854496085192422 0.9104093964056688 0.9082913331400257 1.0500554017908341 1.0614599477443314 0.949930360350831 1.0 13.356950780210019 VIGT(ph)PHAK ddPTM_A549_MK2206_60min_R1 2 VIGTPHAK 8 0 Q6NW34;Q6NW34-2 Q6NW34 C3orf17 Uncharacterized protein C3orf17 1 VIGT(1)PHAK;VIGT(1)PHAK 56.563 0.016489 2536900.0 766.92 830.7 741.5 703.4300000000001 1116.71 895.78 798.92 715.8399999999999 1210.5100000000002 1210.49 1386.04 True False 896.3573466062037 872.9790817934229 846.6558498519375 875.7703815781729 952.4434382967919 990.5708450293603 944.0734226120167 817.312512168058 936.3314177872533 937.0394682781839 1041.8480152420498 0.8603532698557336 0.837914042184556 0.8126481381789994 0.8405932235468218 0.9141865457943146 0.9507824851009805 0.9061527293812454 0.7844834373257158 0.8987216984520702 0.8994013086068835 1.0 10.024929117317676 -14.999999999999998 0.14896218430569974 1.5035445020980747 0.8245349292716657 0.1441939569108971 0.055296390654083656 35.61832754909517 0.3500837151834185 5.210105614794842 0.09625461055184598 1.000000000000004e-15 14.999999999999998 -0.679009572826409 VIHDNFGIVEGLMTTVHAITAT(ph)QK ddPTM_A549_MK2206_60min_R1 2 VIHDNFGIVEGLMTTVHAITATQK 24 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VIHDNFGIVEGLMT(0.008)T(0.007)VHAIT(0.108)AT(0.877)QK;VIHDNFGIVEGLMT(0.003)T(0.003)VHAIT(0.061)AT(0.934)QK 79.616 5.988300000000001e-06 185797000.0 13895.1 16081.099999999999 16321.9 15192.5 23076.0 16350.1 15221.7 16408.2 26690.0 23528.0 23187.0 True False 16240.25317742118 16899.55930206838 18636.590850570912 18914.66318201725 19681.55096859236 18080.256729681994 17987.285857123774 18734.112598005042 20644.75761517193 18213.00845909434 17429.02797135537 0.9317933968613774 0.9696214458914652 1.0692845797941328 1.08523913170049 1.129239737347316 1.037364605725398 1.032030351129501 1.0748799433218297 1.1845042448208596 1.0449813087125366 1.0 14.089204491181192 -5.709438090151681 2.889125616045388 1.08343146769611 0.9365749506209128 0.4872660710383603 0.048294251807722295 0.21233088357416433 3.4419788741192168 0.009418482089632241 0.04619526861955204 1.952369029671504e-06 5.709438090151681 -0.1468565170751973 VIHDNFGIVEGLMTTVHAITAT(ph)QK ddPTM_A549_PD325901_60min_R1 2 VIHDNFGIVEGLMTTVHAITATQK 24 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VIHDNFGIVEGLMT(0.001)T(0.004)VHAIT(0.127)AT(0.867)QK;VIHDNFGIVEGLMT(0.003)T(0.002)VHAIT(0.233)AT(0.762)QK 129.53 4.9784e-23 86823000.0 9008.3 10160.8 10621.0 11683.400000000001 13313.900000000001 13079.8 11181.099999999999 12496.5 13067.2 13648.7 12404.8 True False 9922.815984440047 11017.086275330705 11341.804929261401 12405.057083073409 12378.777594461535 12973.282445393874 11606.602879032685 12247.2475041854 12518.031026412056 12786.918752698279 10879.0882405061 0.9120999632574387 1.012684705903092 1.042532671720822 1.1402662437175268 1.137850647113206 1.192497216548944 1.0668727583087185 1.125760471230046 1.1506507484518493 1.1753667651199624 1.0 13.4092700311727 -5.465004538422105 1.645773200343827 1.0927607470645622 0.8891503156278716 0.5252768125322899 0.057262713418961525 0.5369452371090426 1.857032141407754 0.009834364066411883 0.1523236293243395 3.4276420460646297e-06 5.465004538422105 -0.20361043143669055 VIIPS(ph)PPKDDSPQLSEELR ddPTM_A549_MK2206_60min_R1 2 VIIPSPPKDDSPQLSEELR 19 1 H3BLX4;Q96JM2-2;Q96JM2;Q96JM2-3 H3BLX4 ZNF462 Zinc finger protein 462 1 VIIPS(1)PPKDDSPQLSEELR;VIIPS(0.999)PPKDDSPQLSEELR 61.136 0.00077439 2963600.0 2631.44 3438.6 3055.4 3177.1 3814.32 2835.23 2705.1800000000003 3137.03 3439.4 3975.7000000000003 4061.2 True False 3075.5627394688204 3613.6100525519023 3488.7016637054735 3955.489642625437 3253.238580799152 3135.252156726644 3196.676189582905 3581.7136092514547 2660.3813915931923 3077.586608756434 3052.691956582069 1.0074920048311584 1.1837453971601715 1.1428279411498763 1.2957382201950638 1.0656950085594696 1.0270450478852158 1.0471663158447364 1.173296768948054 0.8714870119328629 1.0081549833813688 1.0 11.575866300956454 -8.758691563812539 24.999988493075243 0.9393133085355198 1.1197079406891193 0.3966478666714427 0.08574527219013338 47.25972053289939 429974.9591719921 0.015461144971525715 0.017149947846213903 1.7430443449958821e-09 8.758691563812539 0.18039463215359952 VIIPS(ph)PPKDDSPQLSEELRR ddPTM_A549_MK2206_60min_R1 1 VIIPSPPKDDSPQLSEELRR 20 2 H3BLX4;Q96JM2-2;Q96JM2;Q96JM2-3 H3BLX4 ZNF462 Zinc finger protein 462 1 VIIPS(0.995)PPKDDS(0.004)PQLS(0.002)EELRR 42.903999999999996 0.013177000000000001 1917600.0 511.22 733.12 547.11 617.22 1093.6 647.8 639.65 543.3 1704.1 890.96 1201.4 True False 597.5014378709948 770.4326765913011 624.6984248314142 768.4389277080588 932.7328886831599 716.3497660251618 755.8661252362891 620.3144387864689 1318.1240708885152 689.6915172014064 903.0592230468084 0.6616414766853275 0.8531363801279367 0.6917579809702404 0.8509286081099338 1.032859047202061 0.7932478266577996 0.837006151917802 0.6869033867940643 1.459620850160115 0.7637278924791598 1.0 9.818676793199852 -8.750891019020763 24.999857863352755 1.2170431870504916 0.8093792679767229 0.19610103341339935 0.19463626125505473 124.33934104903209 294686.86903373356 0.03134257050083157 0.03535729461802277 1.774634748276376e-09 8.750891019020763 -0.40766391907376875 VIISAPSADAPMFVMGVNHEK ddPTM_A549_MK2206_60min_R1 4 VIISAPSADAPMFVMGVNHEK 21 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;; 137.61 6.1035e-18 56539000.0 8540.8 10122.7 8815.08 9954.3 12701.0 10646.1 8485.1 9083.1 14251.5 13029.7 13141.3 False True 9982.27823748795 10637.902192452484 10065.19089536456 12393.10394686551 10832.69972491296 11772.663235690761 10026.732837086587 10370.657240827115 11023.558004969003 10086.281720480336 9877.952528570853 1.0105614709744095 1.0769339254955481 1.0189551798565686 1.254622748086698 1.0966543616787598 1.19181208875419 1.0150618570078571 1.049879234672486 1.1159760054611132 1.0210903212287075 1.0 13.269996320096405 -10.932006781877098 0.7581605627397573 0.9872658566429291 1.096361669292719 0.1566738889449384 0.0722271239144051 1.24825328660253 1.014533066391735 0.0896041431321589 0.013320909380727148 1.1694811284364428e-11 10.932006781877098 0.10909581264978985 VIISAPSADAPMFVMGVNHEK ddPTM_A549_PD325901_60min_R1 4 VIISAPSADAPMFVMGVNHEK 21 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;; 140.35 4.3755e-19 101194000.0 11953.099999999999 12923.099999999999 13596.7 13002.7 15632.499999999998 14619.4 15005.699999999999 15010.3 14926.599999999999 14333.599999999999 16622.1 False True 13166.569912592862 14012.174990623396 14519.45382559915 13805.847247725718 14534.527129197297 14500.344453446618 15576.750124934111 14710.907791147445 14299.286910649731 13428.574049812518 14577.687076173443 0.9032002020480336 0.9612070088625823 0.9960053161883635 0.947053340875367 0.9970393144844844 0.9946944517108453 1.0685337148163643 1.0091386729786336 0.980902308845774 0.9211731586529185 1.0 13.831474216605551 -3.622437543431954 0.7181750667912885 0.997383996133096 1.6130470258552893e-06 0.3448634899110722 0.035067713305854446 15.066833856123054 0.8271849604211154 0.004416882846868536 20.37503757846215 0.0002385406819881143 3.622437543431954 -0.9973823830860702 VIKDEALS(ph)DGDDLR ddPTM_A549_MK2206_60min_R1 2 VIKDEALSDGDDLR 14 1 Q01831-2;Q01831;E7EUB5;Q01831-3 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 VIKDEALS(1)DGDDLR;VIKDEALS(1)DGDDLR 99.09200000000001 1.0106e-05 42431000.0 8298.3 8298.0 8758.6 7093.6 11087.3 10644.0 9148.8 10979.8 11965.2 10812.9 10291.6 True False 9698.850166043734 8720.332756376338 10000.701182081159 8831.532318443804 9456.372857257504 11770.341015084625 10811.018536014637 12536.220274227253 9255.10130449814 8370.258380114808 7735.911686289776 1.2537436516025435 1.127253400763511 1.292763101187573 1.1416278619229556 1.2223992776464694 1.521519569043814 1.3975105940227859 1.6205226717421013 1.1963814582967378 1.0820002502031238 1.0 12.917355609663108 -9.56164802581169 1.4291958718821103 1.0480267822597702 1.3121197139166296 0.3325706467766675 0.14671631579871974 0.29808697929630823 1.2404866171683504 0.038908376524636565 0.029978338705570297 2.7437969827561555e-10 9.56164802581169 0.26409293165685943 VIKDEALS(ph)DGDDLR ddPTM_A549_PD325901_60min_R1 2 VIKDEALSDGDDLR 14 1 Q01831-2;Q01831;E7EUB5;Q01831-3 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 VIKDEALS(1)DGDDLR;VIKDEALS(1)DGDDLR 128.38 3.2521e-09 81323000.0 19956.5 18138.7 17399.1 18056.1 20730.8 17542.1 17606.8 17285.8 19388.6 19723.0 20587.9 True False 21982.46918880119 19667.31190677318 18579.907555287828 19171.384288621615 19274.74012537747 17399.24295366472 18276.836408810646 16941.02115855224 18573.764567672704 18477.686414051757 18055.71881745094 1.2174795925352486 1.089256656332321 1.0290317291234208 1.0617901443000086 1.0675144158064944 0.9636416655341503 1.012246402017847 0.9382634571257646 1.0286915051934167 1.0233703017236282 1.0 14.140168236209792 -2.0000000000001474 0.6485523717363018 1.0074329443101602 19.371573236744972 0.7712988544036381 0.033577005504828054 68.39042447254783 0.40903051431410925 0.005483493885193295 1806.7505204760796 0.009999999999996605 2.0000000000001474 18.36414029243481 VIKDEALS(ph)DGDDLRDFPSDLK ddPTM_A549_MK2206_60min_R1 1 VIKDEALSDGDDLRDFPSDLK 21 2 Q01831-2;Q01831;E7EUB5;Q01831-3 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 VIKDEALS(1)DGDDLRDFPSDLK 110.94 5.6972e-11 4619900.0 1333.9 1810.7 1366.4 1454.8 2104.9 1411.3 1232.7 1728.5 2112.1 1621.9 2147.1 True False 1559.0297092760848 1902.8568958749852 1560.1760664028159 1811.2260653084531 1795.2719983441682 1560.64282925488 1456.665633672749 1973.5201683092428 1633.7127223306334 1255.5116635415288 1613.9158130546045 0.9659919660402616 1.1790310749068822 0.9667022615324171 1.1222556038288056 1.1123702883524742 0.9669914729325959 0.9025660582107853 1.2228148162040913 1.0122663828657579 0.777928844482454 1.0 10.656349609711274 -7.257770635650583 24.847020678717858 1.0129852672650874 1.0726134711059148 0.0905782088681879 0.11743931179530641 578.8153580375335 3920077.7855613995 0.012991834306433617 0.021928683506834384 5.523690854601138e-08 7.257770635650583 0.05962820384082734 VIKDEALS(ph)DGDDLRDFPSDLKK ddPTM_A549_MK2206_60min_R1 4 VIKDEALSDGDDLRDFPSDLKK 22 3 Q01831-2;Q01831;E7EUB5;Q01831-3 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 VIKDEALS(1)DGDDLRDFPSDLKK;VIKDEALS(1)DGDDLRDFPSDLKK;VIKDEALS(1)DGDDLRDFPSDLKK;VIKDEALS(1)DGDDLRDFPSDLKK 149.44 1.042e-27 104278000.0 22053.399999999998 24992.6 21692.0 22120.1 33214.0 25190.600000000002 23497.899999999998 22236.1 36265.4 35763.1 33834.9 True False 25775.474766136285 26264.61658797437 24768.251780159437 27539.52549300901 28328.264598319765 27856.25257183302 27767.164268255776 25388.135270200262 28051.344803943648 27684.190871448332 25432.760534265424 1.0134753060490278 1.0327080519862637 0.9738719376054087 1.0828366608455717 1.1138493817905941 1.095290168532922 1.0917872729877365 0.9982453629441822 1.1029610712588678 1.0885248116951194 1.0 14.634400443738146 -6.269646946380842 24.93841000621239 1.058901749993543 1.009287393182984 0.307316866160508 0.04021010956085578 788.8003917325503 2396750.689633789 0.006845902532057931 0.01618355995059568 5.374685463517747e-07 6.269646946380842 -0.049614356810558924 VIKDEALS(ph)DGDDLRDFPSDLKK ddPTM_A549_PD325901_60min_R1 4 VIKDEALSDGDDLRDFPSDLKK 22 3 Q01831-2;Q01831;E7EUB5;Q01831-3 Q01831-2 XPC DNA repair protein complementing XP-C cells 1 VIKDEALS(1)DGDDLRDFPSDLKK;VIKDEALS(1)DGDDLRDFPSDLKK;VIKDEALS(1)DGDDLRDFPSDLKK;VIKDEALS(1)DGDDLRDFPSDLKK 184.66 3.7653999999999997e-50 259031000.0 52415.0 51505.0 54679.6 55812.0 63058.0 57460.0 61845.0 62295.0 63675.0 62954.0 64590.0 True False 57736.132214116384 55845.507106813224 58390.48647114602 59259.38048175135 58629.02361829033 56992.06481080228 64198.54531788255 61052.47735551793 60998.96118577722 58979.07369620316 56645.839469744715 1.0192475344099015 0.9858712948660783 1.030799208163084 1.0461382695794024 1.0350102349459374 1.0061121053955338 1.1333320490761167 1.0777927898504682 1.076848039622708 1.0411898605140215 1.0 15.789682376252028 -5.9478916332997604 5.0160817365958295 1.0450186888296447 1.002856040290201 0.2045794933538243 0.03581686858626248 0.29970485156550497 16.233146143831434 0.00583625488135294 0.018773695488016943 1.1274787535783938e-06 5.9478916332997604 -0.04216264853944374 VIKT(ph)PVVK ddPTM_A549_MK2206_60min_R1 1 VIKTPVVK 8 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 VIKT(1)PVVK 42.001000000000005 0.052452 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VIKT(ph)PVVK ddPTM_A549_PD325901_60min_R1 2 VIKTPVVK 8 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 VIKT(1)PVVK;VIKT(1)PVVK 60.434 0.0065811 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VILAS(ph)PETSSAK ddPTM_A549_MK2206_60min_R1 2 VILASPETSSAK 12 0 P49116;P49116-2;C9JKS0 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 VILAS(0.64)PET(0.285)S(0.052)S(0.024)AK;VILAS(0.468)PET(0.444)S(0.076)S(0.013)AK 110.31 8.4409e-05 12349100.0 4683.2 5210.0 5140.9 4088.7 6611.799999999999 4975.700000000001 4650.8 5082.5 7624.299999999999 6914.7 7550.1 True False 5473.609666752947 5475.16674629076 5869.956923133951 5090.431683548719 5639.212978598498 5502.225271397648 5495.790159069705 5802.959939503457 5897.408223505257 5352.664467532284 5675.201797840611 0.9644784206326604 0.9647527861254267 1.034316863475664 0.8969604720462284 0.9936585833378107 0.9695206386301928 0.9683867384523364 1.0225116473763904 1.039153925019758 0.9431672490604561 1.0 12.470455977077592 -8.260708601229734 24.335904998774968 1.0193076406353812 0.970593569707148 0.06303896120949415 0.03892452170133144 37.764180373236506 1257584.4202749012 0.005011146589081534 0.006279616862496387 5.486449660158255e-09 8.260708601229734 -0.0487140709282331 VILAS(ph)PETSSAK ddPTM_A549_PD325901_60min_R1 2 VILASPETSSAK 12 0 P49116;P49116-2;C9JKS0 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 VILAS(0.961)PET(0.035)S(0.004)S(0.001)AK;VILAS(0.922)PET(0.06)S(0.013)S(0.004)AK 128.68 8.5151e-08 7817800.0 7546.0 7021.9 8146.3 8167.8 9517.3 9369.0 8395.4 8633.3 9602.6 9819.2 10637.400000000001 True False 8312.064364928405 7613.660156360189 8699.156905681397 8672.306455580314 8848.837680902574 9292.701970282045 8714.891541139159 8461.102058807168 9199.036115941011 9199.214036244843 9329.067236034403 0.8909855781532232 0.8161223371776878 0.9324787447216676 0.9296005952323627 0.9485233043152591 0.9961019397939492 0.9341653694462687 0.9069612046663531 0.9860617233423793 0.9860807949493611 1.0 13.187517125522653 -2.00000000025676 0.1941092580152711 1.0067734097025836 0.2788836969031106 0.5470476347542816 0.0351989515131947 22.903678067817108 0.2506797777824881 0.029742215648954105 5.0874931408769415 0.009999999994087884 2.00000000025676 -0.727889712799473 VILASPET(ph)SSAK ddPTM_A549_PD325901_60min_R1 1 VILASPETSSAK 12 0 P49116;P49116-2;C9JKS0 P49116 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 VILAS(0.213)PET(0.579)S(0.172)S(0.036)AK 105.65 0.00016871 5196200.0 2718.1 2973.7 3208.0 3178.3 3194.9 3453.1 3535.1 3244.6 3633.1 3412.5 4183.0 True False 2994.0395110405375 3224.304135201057 3425.714171271119 3374.6163725569795 2970.5012458066494 3424.979098471655 3669.630164980946 3179.883907660542 3480.4134414455775 3197.034167619108 3668.5175182217354 0.8161442588645067 0.8789120180524571 0.9338143144350277 0.9198855820628 0.8097279707816579 0.9336139411791246 1.0003032960190825 0.8668035226398341 0.9487247707440856 0.8714785064373435 1.0 11.840981459120309 -2.0000000000000013 0.05487801683310809 1.1662022283521818 0.4093942558343968 0.018263529192994787 0.061276565072139376 204.36393915397045 0.819323155341983 2.438937088729235 12.618461970244606 0.009999999999999969 2.0000000000000013 -0.756807972517785 VILDLTPNYR ddPTM_A549_MK2206_60min_R1 1 VILDLTPNYR 10 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 120.12 0.00014834 3362800.0 1675.3 2061.5 1866.8 1899.5 2561.5 2117.6 1849.6 1916.5 2762.6 2591.5 2922.1 False True 1958.0496828474577 2166.421544621575 2131.5403108612218 2364.8775852717963 2184.706743198533 2341.6830264508835 2185.648378389808 2188.169744035095 2136.875510965679 2006.078350125083 2196.461924142734 0.891456237563359 0.9863232869229528 0.9704426411548879 1.0766758846478952 0.9946481289682318 1.0661159206594617 0.9950768344153534 0.9962247558145696 0.9728716384645224 0.9133226158282 1.0 11.10096577506632 -5.116165432170958 2.003869707812141 0.9989625851633647 0.828096633872729 0.3467205906458839 0.042002970546890485 0.8725038274787726 2.6616391881095223 0.004770066412062091 0.30995389078936425 7.65305030125424e-06 5.116165432170958 -0.17086595129063564 VILDLTPNYR ddPTM_A549_PD325901_60min_R1 1 VILDLTPNYR 10 0 F5GZS6;J3KPF3;P08195-3;P08195;P08195-4;P08195-2 F5GZS6 SLC3A2 4F2 cell-surface antigen heavy chain 0 115.71 0.00023892 5821200.0 2421.8 2729.7 2669.4 3141.1 3283.6 2917.2 3297.3 3508.4 3103.4 2986.2 2967.5 False True 2667.6593531650688 2959.741398882984 2850.5615364062132 3335.1186130443116 3052.971263805036 2893.443290394577 3422.7805558517925 3438.4222097134434 2972.974890364208 2797.6508223719184 2602.516312532395 1.0250307905156935 1.1372614206606024 1.095309767196985 1.2814976786059231 1.1730843910962168 1.1117868028189586 1.3151812111107322 1.3211914150761517 1.1423463038628703 1.0749791687759476 1.0 11.345691491005544 -10.015692150917017 1.0194784652102094 1.0177449154600948 1.1810775822428015 0.2508316741963579 0.09143838482846187 0.39530532861160567 0.8291544075517814 0.03376320423284601 0.017861260488196428 9.645124747865376e-11 10.015692150917017 0.16333266678270664 VILGS(ph)PRPR ddPTM_A549_MK2206_60min_R1 1 VILGSPRPR 9 1 A0A1C7CYW6;A0A1B0GWB1;A0A1B0GTQ2;P0DI83 A0A1C7CYW6 RAB34 Ras-related protein Rab-34, isoform NARR 1 VILGS(1)PRPR 77.37899999999999 0.00053467 1257500.0 368.84 397.11 293.47 264.98 444.36 286.46 210.78 215.94 418.27 586.79 693.31 True False 431.0911747277837 417.3212028060507 335.0884588753178 329.9001118954043 378.99523264013243 316.77300706324155 249.07599761948728 246.55015628851473 323.5325128399386 454.2337314566459 521.141992617432 0.8272048325306339 0.8007821452077923 0.6429887892785964 0.6330330630976085 0.7272398655434222 0.6078439495390715 0.4779426742575566 0.47309593120719035 0.6208145139388956 0.8716122244827367 1.0 9.025532698814088 -10.5833086958247 0.9427340402825606 0.9935489032863479 0.6433054054488708 0.48824821829083964 0.11203433484341015 0.32215427963374654 0.5249101831089532 0.0727668602089496 0.021608819267815774 2.610305293997457e-11 10.5833086958247 -0.3502434978374771 VILHLK ddPTM_A549_MK2206_60min_R1 2 VILHLK 6 0 P08238;Q58FF7;Q58FF6;G3V2J8;P07900;P07900-2;Q14568 P08238;G3V2J8;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ; 87.758 0.04161 10759200.0 2128.91 1920.2799999999997 1705.77 1675.67 2542.14 2028.3600000000001 1910.6799999999998 2293.31 2539.97 2549.88 2456.01 False True 2488.217961147725 2018.0140498209635 1947.6738354712602 2086.209225223684 2168.194573552494 2242.9997088836026 2257.8258237574805 2618.393715467324 1964.6708504986236 1973.8603370314281 1846.1149345723252 1.3478131369562594 1.093113983333037 1.055012230818913 1.1300538152609547 1.1744634816330017 1.2149837839880866 1.2230147654812906 1.4183264900968404 1.0642191413471032 1.0691968848021354 1.0 10.850276659084441 -8.977016000768344 24.894235973053675 1.028331808503222 1.1982354130129131 0.3416474449164746 0.10043450044871013 119.97003315520138 129942.4155862666 0.018073972689142074 0.01861911739143412 1.0543480501926745e-09 8.977016000768344 0.1699036045096911 VILHLK ddPTM_A549_PD325901_60min_R1 1 VILHLK 6 0 P08238;Q58FF7;Q58FF6;G3V2J8;P07900;P07900-2;Q14568 P08238;G3V2J8;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 87.758 0.04161 15576000.0 1662.1 1517.5 1367.9 1425.5 1713.5 1117.5 1518.0 1371.9 1272.5 1371.4 1596.9 False True 1830.835168426651 1645.3850506667138 1460.7339198509242 1513.549897454606 1593.1496712540904 1108.399450505944 1575.7683206814731 1344.5363782652696 1219.02125023795 1284.8095699554126 1400.4914235831443 1.3072805285322464 1.1748626396133233 1.0430152553977445 1.0807277159771551 1.1375647465073595 0.791436085820586 1.1251538525311955 0.960046134966886 0.870423930993519 0.9173990988593412 1.0 10.451717433235554 -3.5501727173426647 0.4045461770260833 0.9420301058111611 2.671284977517943 0.577587402816607 0.0922344209726906 9.344931493196803 0.35083782303655936 0.020831766226380898 10.626282664530848 0.0002817262293430978 3.5501727173426647 1.729254871706782 VILHLKEDQTEYLEER ddPTM_A549_MK2206_60min_R1 2 VILHLKEDQTEYLEER 16 1 P08238;Q58FF7;Q58FF6;G3V2J8;P07900;P07900-2 P08238;G3V2J8;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha 0 ; 187.89 1.0634e-33 23311000.0 2026.33 2180.23 2055.34 2147.07 2631.4 2237.5 2150.35 1650.75 3246.0 2802.0 2941.9 False True 2368.3249649879363 2291.1943944847408 2346.8181179159574 2673.102246385634 2244.324545794502 2474.2707648677065 2541.0407604187512 1884.7488677098538 2510.7861827968563 2169.026253926483 2211.3450376905316 1.0709884367305023 1.0361089542487687 1.0612627509124086 1.2088128269559186 1.0149137776067787 1.1188985539098717 1.1490928449015558 0.8523088145838309 1.135411317547737 0.9808628761940086 1.0 11.110708432081367 -11.13658593732883 1.481924872690942 0.9997293612787242 1.0792334033473654 0.10597353598281356 0.08781153627142112 0.797213877453899 3.117886878272464 0.062409953420697606 0.013182170308734854 7.301533172904912e-12 11.13658593732883 0.07950404206864115 VILHLKEDQTEYLEER ddPTM_A549_PD325901_60min_R1 2 VILHLKEDQTEYLEER 16 1 P08238;Q58FF7;Q58FF6;G3V2J8;P07900;P07900-2 P08238;G3V2J8;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha 0 ; 201.3 7.0365e-39 40224000.0 2252.3 3202.2 3174.5 3871.7 3823.1 3845.0 4059.2 3584.5 4166.2 3587.2 3344.6000000000004 False True 2480.9518379443734 3472.060632121878 3389.940659819255 4110.846115731321 3554.5786449789966 3813.6875948056863 4213.67507727947 3513.004335514147 3991.1091023507656 3360.7035798046177 2933.2354031662485 0.8458072731790764 1.1836965517237383 1.1557001719534754 1.401471600708867 1.2118286316679685 1.3001641773070935 1.436528098880528 1.1976550984356977 1.3606508015151484 1.1457326528163896 1.0 11.518277142102848 -5.188796140066849 2.5469078507024596 1.2189346439277906 0.7206516302789212 0.45417397893454714 0.12261923146368399 0.6608079432869711 4.497838489233804 0.021837486091837967 0.7603199713090819 6.474464589337654e-06 5.188796140066849 -0.4982830136488694 VINAAHSFYNGT(ph)TTLPISDEDRTPR ddPTM_A549_MK2206_60min_R1 2 VINAAHSFYNGTTTLPISDEDRTPR 25 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 VINAAHSFYNGT(0.436)T(0.313)T(0.031)LPIS(0.087)DEDRT(0.132)PR;VINAAHS(0.001)FYNGT(0.856)T(0.14)T(0.003)LPISDEDRTPR 155.22 1.7232e-40 70846000.0 2410.57 2228.6099999999997 2720.1 2534.3999999999996 2838.4 2454.46 2181.4300000000003 2632.5 3833.7 3599.5 3874.6 True False 2817.4152832218697 2342.036729837053 3105.851081837163 3155.3281137735385 2420.8751200057445 2714.1893280613117 2577.7675941127172 3005.664936693131 2965.373071160906 2786.3704500386775 2912.4298864800785 0.9673761748911861 0.8041521413817125 1.0664123096164386 1.083400540703496 0.8312217682024888 0.9319329336170363 0.8850917256683458 1.0320128050621453 1.0181783551001853 0.9567167480918297 1.0 11.508007603563753 -8.279305653509274 24.365081759819315 1.0105812213749212 0.9394570152183612 0.11723834705674707 0.08212059678313748 854.3041556672014 1165052.4806042765 0.013098133741152403 0.01585240591345924 5.256471892522986e-09 8.279305653509274 -0.07112420615656001 VINAAHSFYNGT(ph)TTLPISDEDRTPR ddPTM_A549_PD325901_60min_R1 3 VINAAHSFYNGTTTLPISDEDRTPR 25 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 VINAAHSFYNGT(0.53)T(0.376)T(0.051)LPIS(0.014)DEDRT(0.029)PR;VINAAHSFYNGT(0.665)T(0.305)T(0.013)LPIS(0.003)DEDRT(0.014)PR;VINAAHSFYNGT(0.649)T(0.299)T(0.018)LPIS(0.03)DEDRT(0.004)PR 208.72 1.062e-80 145885000.0 5190.1 5137.5 6126.360000000001 5777.5599999999995 7580.0 7513.3 7398.1 7696.400000000001 7375.900000000001 8139.4 8467.699999999999 True False 5716.995131250318 5570.455155057815 6542.131630395433 6134.426759409219 7047.606949580396 7452.1141758266795 7679.638743895655 7542.889264291006 7065.916573383178 7625.476894921306 7426.226581172895 0.7698384999111323 0.7501057359574962 0.880949639616594 0.8260489620612075 0.9490158794033591 1.0034859688659938 1.0341239470615151 1.0157095507177059 0.9514814147062006 1.02683062677532 1.0 12.85841361851184 -6.514907170179992 1.1942114811150084 0.9867120957079778 0.7705999044257161 0.8532820074930256 0.03828063698452095 0.14611536611875894 0.3923530890081771 0.0060538916428864884 0.022046263714903175 3.055574167995843e-07 6.514907170179992 -0.21611219128226167 VINAAHSFYNGTTTLPISDEDRT(ph)PR ddPTM_A549_MK2206_60min_R1 2 VINAAHSFYNGTTTLPISDEDRTPR 25 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 VINAAHSFYNGT(0.024)T(0.017)T(0.013)LPIS(0.047)DEDRT(0.899)PR;VINAAHSFYNGT(0.008)T(0.084)T(0.001)LPIS(0.044)DEDRT(0.863)PR 169.5 5.770399999999999e-48 77822000.0 1682.42 2995.8999999999996 2985.06 2742.9900000000002 3365.5 2650.6 3047.2 2263.12 3774.2 3749.3999999999996 3888.4 True False 1966.3713647801712 3148.3785134764835 3408.386394010823 3415.0226731374996 2870.43940825089 2931.0847326741186 3600.836796404316 2583.9241905143263 2919.3497261589328 2902.4079359286084 2922.802965619452 0.6727690466686738 1.0771778154430685 1.166136217221354 1.1684067360365935 0.9820844723423003 1.002833501659908 1.2319806838710945 0.884056921013386 0.9988185178744037 0.9930220990156545 1.0 11.513136860947727 VINAAHSFYNGTTTLPISDEDRT(ph)PR ddPTM_A549_PD325901_60min_R1 3 VINAAHSFYNGTTTLPISDEDRTPR 25 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 VINAAHSFYNGT(0.007)T(0.005)T(0.004)LPIS(0.093)DEDRT(0.891)PR;VINAAHSFYNGTTTLPIS(0.004)DEDRT(0.995)PR;VINAAHSFYNGTTTLPIS(0.207)DEDRT(0.792)PR 222.78 4.270399999999998e-95 150575000.0 5730.08 5850.52 6189.68 7275.1 8363.6 7958.66 7637.1 8350.73 8234.96 8440.0 8418.8 True False 6311.7935033380545 6343.563852801725 6609.748906369527 7724.466404049116 7776.169588853636 7893.847311645311 7927.734019681477 8184.168139129048 7888.873269044805 7907.096959620588 7383.3409711702525 0.8548695675824438 0.8591725449998114 0.8952246594297388 1.0462020424372729 1.0532047238800513 1.0691429994183437 1.0737326165264367 1.1084640640444192 1.0684693148871907 1.0709375322764378 1.0 12.85005807003257 -6.1960133876495265 3.462142036709211 1.0466254327388338 0.8604620127989476 0.9024296452222292 0.027881630084812804 0.07301815896469958 1.7284357807647437 0.005254330054210966 0.0149622135560734 6.367758912229651e-07 6.1960133876495265 -0.18616341993988617 VINEPTAAALAYGLDK ddPTM_A549_MK2206_60min_R1 1 VINEPTAAALAYGLDK 16 0 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 78.763 0.00099633 693530.0 1396.8 1276.8 1506.8 952.69 1863.6 1690.4 1048.5 1641.4 2527.5 2331.9 2339.7 False True 1632.5456915187303 1341.7836663462647 1720.4868975817928 1186.0990927678797 1589.4669086959912 1869.2770060032947 1238.9988779961682 1874.0734765766783 1955.0252855881242 1805.1221704251134 1758.6879175650222 0.928274809426711 0.7629458603457178 0.9782786817367118 0.6744227221450888 0.903779967338762 1.0628815876505182 0.704501842323233 1.065608888228113 1.1116385494334546 1.0264027815261172 1.0 10.780283781271352 -8.297121567366661 24.643684351723074 1.0551580369020483 0.8625986502159064 0.40513728396608273 0.1116033556114898 359.49211107199875 248280.11366269158 0.017575371616493807 0.021247974374457836 5.0452005294314345e-09 8.297121567366661 -0.19255938668614192 VINSVDIK ddPTM_A549_PD325901_60min_R1 1 VINSVDIK 8 0 O75083;D6RD66 O75083 WDR1 WD repeat-containing protein 1 0 89.24700000000001 0.0073822 1595200.0 2481.9 2617.6 2827.9 2865.2 3144.0 3736.7 2477.5 2899.6 3892.6 3504.3 3164.3 False True 2733.8606609217886 2838.1943384679976 3019.8182995441384 3042.176896658673 2923.176286211182 3706.2695540989384 2571.782618240021 2841.7652033078034 3729.0075588811346 3283.0378999524223 2775.1111601503812 0.9851355506687677 1.0227317662886692 1.0881792206768743 1.0962360500520705 1.0533546649182792 1.335539133465954 0.9267313883385694 1.0240185128850154 1.3437326808483818 1.1830293312555151 1.0 11.438329846029607 -5.584409691839407 0.6719350105169561 1.1459758953569523 0.9211492026498695 0.11173495677265954 0.1235107795044022 3.8711653361813414 1.5365002693763439 0.025603786149096218 0.6063744319470412 2.6036961934642327e-06 5.584409691839407 -0.22482669270708278 VINT(ph)PEILR ddPTM_A549_PD325901_60min_R1 1 VINTPEILR 9 0 H0YC66;Q9H013-2;Q9H013 H0YC66 ADAM19 Disintegrin and metalloproteinase domain-containing protein 19 1 VINT(1)PEILR 59.426 0.0098803 1474300.0 613.47 608.5 561.62 679.5 631.03 664.23 763.36 651.43 856.3 622.61 797.8 True False 675.7490227872555 659.7804305309361 599.7349104954138 721.471171743532 586.7086297353185 658.8207311047544 792.4100825266203 638.4367176130507 820.3126888634633 583.2982983447129 699.6756576708829 0.9658032480888707 0.9429803985567369 0.8571613202778027 1.0311508823176772 0.8385437213699631 0.9416087638347623 1.1325391613085936 0.9124752456564124 1.172418505446028 0.8336695609597552 1.0 9.450542489676076 -7.68333063625037 7.309242836916726 1.071516097639539 0.9264266361264075 0.0 0.10716178754555301 0.18324390344056907 14.539990816929222 0.013348557699255277 0.019804321000810896 2.0733344493982433e-08 7.68333063625037 -0.1450894615131315 VIPEDAS(ph)ESEEK ddPTM_A549_MK2206_60min_R1 2 VIPEDASESEEK 12 0 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(1)ESEEK;VIPEDAS(1)ESEEK 202.32 9.271700000000001e-25 10584500.0 4644.6 5263.6 3883.3 4464.9 7091.1 6898.7 5435.4 6742.5 8631.0 6029.2 6076.1 True False 5428.494930432345 5531.494757346645 4434.010332744478 5558.80070043698 6048.00858352337 7628.715855013562 6422.941823042801 7698.270023040242 6676.092280874818 4667.1995325387425 4567.236678171062 1.1885731598665854 1.2111250515621885 0.9708299887187072 1.217103708902379 1.3242161529376402 1.6703132315158369 1.4063080754586277 1.6855421703529923 1.461735563821983 1.021886944209712 1.0 12.157105838025451 -6.552182037223767 5.142548563555718 1.3132837056844255 1.1260785632308121 0.17510853955442474 0.21646865408923766 0.3565174846787123 24.685507596983737 0.037302748852580794 0.08079720672739397 2.8042579694663817e-07 6.552182037223767 -0.18720514245361342 VIPEDAS(ph)ESEEK ddPTM_A549_PD325901_60min_R1 2 VIPEDASESEEK 12 0 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(0.999)ES(0.001)EEK;VIPEDAS(0.999)ES(0.001)EEK 134.21 2.2318e-18 6252400.0 5551.2 5199.0 5570.7 5471.0 5945.9 4670.2 5006.2 5527.9 5966.1 5352.0 6146.9 True False 6114.753737422547 5637.137975892088 5948.76120134041 5808.931244457491 5528.280496241437 4632.167439599876 5196.713680497754 5417.641697946343 5715.365564671619 5014.073806621966 5390.870268409563 1.134279519441403 1.045682365781579 1.10348810213447 1.0775498120401374 1.025489433243663 0.859261530878293 0.9639841846965665 1.0049660682234667 1.0601934901241445 0.930104706099937 1.0 12.396302476113087 -6.772352157489249 4.4754407317313865 1.0087792501052464 1.0890235576009637 0.406694836808571 0.058435156884267155 0.20676913736593067 9.961448769751557 0.00877077267397208 0.01775324171759768 1.689070755029414e-07 6.772352157489249 0.08024430749571732 VIPEDAS(ph)ESEEKLDQK ddPTM_A549_PD325901_60min_R1 2 VIPEDASESEEKLDQK 16 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(1)ESEEKLDQK;VIPEDAS(0.998)ES(0.002)EEKLDQK 195.39 1.0519e-39 87208000.0 13995.099999999999 14320.2 14312.5 14769.8 17306.3 13924.7 14658.3 14826.1 15419.4 15766.800000000001 15644.900000000001 True False 15415.872249351913 15527.013510746267 15283.832318054208 15682.097001350441 16090.765191493832 13811.301859919568 15216.129627829534 14530.381804649553 14771.3762404079 14771.281557221077 13720.676481192268 1.1235504510643735 1.1316507266992302 1.1139270238610064 1.1429536308101722 1.1727384734674258 1.0066050226351102 1.1089926687424758 1.0590135132598744 1.0765778393402023 1.0765709385735416 1.0 13.744063993130275 -11.318757362529219 0.11026495779449663 0.8371083060310303 1.198101487196454 0.3248537608200629 0.042747386647811664 15.79580682292352 0.3372567251089609 0.9763607189056434 0.2710959720745185 4.800015474448891e-12 11.318757362529219 0.36099318116542367 VIPEDAS(ph)ESEEKLDQKEDGSK ddPTM_A549_MK2206_60min_R1 1 VIPEDASESEEKLDQKEDGSK 21 2 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(0.952)ES(0.048)EEKLDQKEDGSK 131.56 3.3349999999999996e-18 28932000.0 5108.8 4853.6 4604.8 4068.4 5607.3 5015.6 4402.4 4698.0 6815.4 5884.7 6288.5 True False 5971.040541831969 5100.627508598239 5257.82988185867 5065.158182637418 4782.473597945397 5546.347462914175 5202.259094411378 5363.955887021591 5271.722781957388 4555.342182898351 4726.891896229281 1.263206494439859 1.0790658260382668 1.1123228534278364 1.0715620948890279 1.011758614949594 1.1733603358559113 1.1005665474518902 1.1347743939946047 1.115261972917707 0.9637077138430481 1.0 12.20667615537572 -10.608229916370394 0.7296972084882076 0.9936697120892607 1.1144164024424992 0.4101284521208187 0.061581154385475324 0.7114322569600879 0.6240222506604277 0.05065494052047089 0.011389903511161046 2.4647341565727206e-11 10.608229916370394 0.12074669035323848 VIPEDAS(ph)ESEEKLDQKEDGSK ddPTM_A549_PD325901_60min_R1 2 VIPEDASESEEKLDQKEDGSK 21 2 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(0.962)ES(0.038)EEKLDQKEDGSK;VIPEDAS(0.958)ES(0.042)EEKLDQKEDGSK 156.27 4.1921e-28 82188000.0 24089.0 23056.0 24002.0 23497.0 27769.0 22616.0 25682.0 25994.0 24447.0 26235.0 26196.0 True False 26534.497546615483 24999.01003503905 25630.920055751074 24948.356324441174 25818.60123784934 22431.8227943109 26659.342563729624 25475.529278101494 23419.57760673254 24578.517622706884 22974.058070125906 1.1549765159303467 1.088140804673349 1.1156461769842914 1.0859359825890982 1.1238154425761773 0.976397932217291 1.1604106894112818 1.1088824273160671 1.0193922873898347 1.0698378818266905 1.0 14.487718092188222 -8.80777406811795 5.431343575579293 1.0086315735755613 1.099813686796023 0.2698944945128461 0.04960533618473482 0.12173632789995517 8.086603317919772 0.007614586793989864 0.008142844766406906 1.5567752981217229e-09 8.80777406811795 0.09118211322046177 VIPELNGK ddPTM_A549_MK2206_60min_R1 2 VIPELNGK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 157.58 0.00096052 82852000.0 17674.0 20229.8 17882.7 17730.6 26133.0 18998.2 19400.9 19461.4 26952.0 27651.0 25952.0 False True 20656.93911218646 21259.410411537956 20418.73576014463 22074.597795956874 22288.87031817577 21008.576914015488 22925.792400682752 22220.113048037896 20847.415033499958 21404.61989554648 19507.402161237536 1.0589282438249583 1.0898124842979744 1.046717322551435 1.1316011026737594 1.1425852675793597 1.0769541090284631 1.1752355444969387 1.139060591686098 1.0686925332848838 1.0972562988463341 1.0 14.251734043778018 -9.647919930408838 1.0253298432800264 1.012426437681473 1.1065759728853106 0.09869689752336297 0.04585317374473428 0.2755825277566922 0.6012282090812828 0.01196436821044458 0.008011485573418912 2.2494692956184184e-10 9.647919930408838 0.09414953520383773 VIPELNGK ddPTM_A549_PD325901_60min_R1 2 VIPELNGK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 172.14 1.3830999999999999e-05 160460000.0 31004.0 28227.0 30444.0 29957.0 34270.0 32360.0 31987.0 33018.0 34550.0 32629.0 35597.0 False True 34151.503256061515 30605.78835266512 32510.112914643996 31807.37585271668 31862.993425081797 32096.470888923788 33204.28278895804 32359.430087880086 33097.98365086146 30568.799371500005 31218.79466797493 1.0939404810236006 0.9803641901671929 1.0413634882577236 1.0188534243875063 1.0206349656980096 1.0281137125979178 1.0635991280925357 1.0365368180301737 1.060194155567904 0.9791793596329423 1.0 14.930127216669755 -5.2250917246107775 23.306560805511694 1.0290780252096166 1.0939408490292009 0.3376419860027068 0.027388933973004268 7090.614217481172 4546381.988513091 0.003610335824109343 1.0093775208065021 5.955363507519969e-06 5.2250917246107775 0.0648628238195843 VIPELNGKLT(ph)GMAFR ddPTM_A549_PD325901_60min_R1 1 VIPELNGKLTGMAFR 15 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VIPELNGKLT(1)GMAFR 46.621 0.0086178 2138200.0 1536.8 1669.8 1719.2 1901.5 2164.6 2087.0 1750.8 2294.1 2115.5 2438.6 2331.7 True False 1692.8148046676354 1810.5199061636094 1835.875250389435 2018.9513363801725 2012.5659634646079 2070.0041639426436 1817.427652074522 2248.3423758133654 2026.5928918494176 2284.6263798259206 2044.9156818641222 0.8278164325702096 0.885376312686477 0.8977755252558246 0.9873029750252191 0.9841804145342439 1.0122687122510845 0.8887543228275189 1.0994792576307115 0.9910398310418346 1.1172227784684408 1.0 10.997825642320867 -5.886237158160046 1.0425906533459322 0.9975678009063559 0.817524919012875 0.5320986763114529 0.05877869710054526 0.3924939791098515 0.5948576475136592 0.006432263856026529 0.06114877518871362 1.299459779353397e-06 5.886237158160046 -0.18004288189348083 VIPQHQLS(ph)ISPDIR ddPTM_A549_PD325901_60min_R1 1 VIPQHQLSISPDIR 14 0 O60503 O60503 ADCY9 Adenylate cyclase type 9 1 VIPQHQLS(0.5)IS(0.5)PDIR 101.96 8.7419e-06 5184400.0 445.59 623.65 569.94 542.42 556.94 290.47 498.74 611.46 494.84 607.12 655.88 True False 490.82596877397907 676.2071741998652 608.6195557276377 575.9240514748002 517.822455738695 288.10450862502165 517.7198236210002 599.2639506189097 474.0435956524536 568.7863395882528 575.2109179658792 0.8532973791764751 1.1755812573779711 1.0580806739202755 1.001239777421894 0.9002305755423989 0.5008675941754493 0.9000521503517613 1.0418160224393678 0.8241213454863061 0.9888309171871326 1.0 9.16794724932409 -6.6809890697011065 4.111867802062234 0.8904697104389391 1.0407325078763634 0.1668065640785098 0.15216012317048525 0.320285627372901 10.310444766146961 0.02253064994686068 0.04796485554281973 2.084543346105822e-07 6.6809890697011065 0.15026279743742432 VIPQHQLSIS(ph)PDIR ddPTM_A549_PD325901_60min_R1 1 VIPQHQLSISPDIR 14 0 O60503 O60503 ADCY9 Adenylate cyclase type 9 1 VIPQHQLS(0.188)IS(0.812)PDIR 96.208 1.4486e-05 3847000.0 517.85 686.49 533.07 642.76 760.87 568.07 535.27 574.34 663.42 825.46 788.76 True False 570.4217507789792 744.3429215368644 569.2473358103169 682.4618253861261 707.4291160590021 563.4438262630081 555.6399927609832 562.8843381389864 635.5387645051954 773.3403147261154 691.7475203616013 0.8246097513740263 1.0760326558854445 0.8229120004835736 0.986576468000028 1.0226695365517227 0.8145223649930479 0.8032410328995906 0.8137135610471672 0.918743827477656 1.1179516976394257 1.0 9.434101757134085 -10.08893963500109 1.078884106980718 0.9899386273404402 0.9015959162889321 0.23202132977970047 0.09847236837424285 0.6771826609668314 1.5808728603949924 0.03249635723970417 0.016858602128232612 8.148175321584493e-11 10.08893963500109 -0.08834271105150815 VIPS(ph)PFK ddPTM_A549_MK2206_60min_R1 1 VIPSPFK 7 0 G3V2Y4;G3V4W5;H0YIZ0;P34897-3;P34897-2;P34897 G3V2Y4 SHMT2 Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, mitochondrial 1 VIPS(1)PFK 56.563 0.043673000000000003 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VIPS(ph)PFK ddPTM_A549_PD325901_60min_R1 2 VIPSPFK 7 0 G3V2Y4;G3V4W5;H0YIZ0;P34897-3;P34897-2;P34897 G3V2Y4 SHMT2 Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, mitochondrial 1 VIPS(1)PFK;VIPS(1)PFK 69.954 0.021369 9429000.0 2951.0 3075.6 3254.3 3026.6 4303.9 2993.6 3241.6 3411.6 2985.4 3408.1 4193.0 True False 3250.583347588619 3334.7916058191367 3475.156367695638 3213.546208092679 4001.608911648953 2969.2211141249177 3364.9608618715824 3343.552961651575 2859.9340200081556 3192.911984370017 3677.2875816169594 0.8839622345117996 0.9068617919604695 0.9450325248066562 0.8738903707606229 1.0881958027034113 0.8074487100134022 0.9150660064481435 0.9092443512893174 0.7777292247430371 0.8682791088550231 1.0 11.844426291322664 VIPSS(ph)GSK ddPTM_A549_MK2206_60min_R1 2 VIPSSGSK 8 0 Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 VIPS(0.162)S(0.816)GS(0.022)K;VIPS(0.121)S(0.712)GS(0.167)K 70.1 0.006755800000000001 11998800.0 6768.0 7380.9 6649.4 6419.7 8550.9 7543.6 7061.700000000001 7667.7 11433.0 10195.599999999999 10524.900000000001 True False 7910.272938286633 7756.5562836271465 7592.38490627845 7992.526788191285 7293.073937308737 8341.858744963585 8344.719481874623 8754.619956346409 8843.443754749365 7892.406878848273 7911.27685753734 0.99987310275335 0.9804430338242067 0.9596914686464207 1.0102701412322002 0.9218580096031376 1.0544263454787346 1.0547879479055682 1.1066001246063821 1.1178276167043653 0.9976147998573593 1.0 12.949694845020446 -7.372968897198452 7.5764397483744 1.0612895459033564 0.9760586330617207 0.49319813571132975 0.04054179468277492 0.2065420780324854 12.637627838475156 0.007281545257187831 0.011655778848663603 4.2367330710955864e-08 7.372968897198452 -0.08523091284163575 VIPSS(ph)GSK ddPTM_A549_PD325901_60min_R1 2 VIPSSGSK 8 0 Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;H0Y314 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 VIPS(0.117)S(0.854)GS(0.029)K;VIPS(0.187)S(0.765)GS(0.048)K 87.29799999999999 0.0027140000000000003 23748000.0 10234.0 11022.8 10841.900000000001 11467.099999999999 12479.2 11508.0 12232.099999999999 11845.5 11794.0 11676.6 12275.3 True False 11272.948146127386 11951.73004051996 11577.696531641017 12175.396723326356 11602.704042902866 11414.28266346524 12697.599259161947 11609.232209885018 11298.33919473979 10939.337483258982 10765.515919537958 1.0471349659767357 1.110186462947789 1.0754427951408312 1.1309626788280212 1.0777657224811237 1.0602634141063185 1.1794696467930086 1.0783721185917183 1.049493519788943 1.016146143391564 1.0 13.3941298394841 -9.216408225756417 1.1524615040387034 1.013043199577234 1.0968993800094402 0.47027094369095324 0.03540933562345945 0.24075545620572053 0.6657312309694258 0.008319369463876297 0.007187113358208687 6.07563638435173e-10 9.216408225756417 0.08385618043220622 VIQHCPPPKS(ph)R ddPTM_A549_PD325901_60min_R1 1 VIQHCPPPKSR 11 1 A0A0A0MTJ5;Q01973-2;Q01973 A0A0A0MTJ5 ROR1 Tyrosine-protein kinase transmembrane receptor;Tyrosine-protein kinase transmembrane receptor ROR1 1 VIQHCPPPKS(1)R 41.644 0.036601 1478800.0 728.54 807.17 619.42 828.78 812.64 826.19 520.78 780.66 622.12 667.99 758.97 True False 802.5008444771983 875.193048663361 661.457566075049 879.9718583040544 755.5629698558062 819.4617825624211 540.5985678817506 765.0891238840778 595.9744598805762 625.8129974001138 665.6215015072323 1.2056414083078995 1.3148509275640512 0.9937442894756938 1.3220303976230448 1.1351240429356781 1.231122763773155 0.8121711312774903 1.1494357110634363 0.895365396897565 0.9401934823064215 1.0 9.378558227245362 -7.743661913144623 24.9952881894848 0.9579734817108869 1.1987860079922485 0.5311803553827326 0.11272096432994509 138.112751137025 194187.3856459405 0.015961706224303228 0.023646670602048916 1.8044218893230623e-08 7.743661913144623 0.24081252628136163 VIQLMPS(ph)PIMHPLILNPR ddPTM_A549_MK2206_60min_R1 2 VIQLMPSPIMHPLILNPR 18 0 P41212 P41212 ETV6 Transcription factor ETV6 1 VIQLMPS(1)PIMHPLILNPR;VIQLMPS(1)PIMHPLILNPR 54.225 0.0027555 5200400.0 1925.0900000000001 2638.0 2289.6 2246.71 2533.8 2684.1 2151.36 1993.48 3232.7 3284.1 3380.8 True False 2249.9981280682928 2772.2629321909812 2614.2997084571757 2797.1540508586454 2161.081376504565 2968.1296804386193 2542.2342643450997 2276.061894776457 2500.4986115611214 2542.219529093492 2541.2540546667656 0.8853888984206008 1.0909034958940804 1.0287439398891538 1.1006983129931243 0.8503995783247053 1.1679783353372082 1.0003857188841605 0.895645160151025 0.983962468045727 1.0003799204668078 1.0 11.311324896608324 -7.9934258324470955 24.987076769841877 0.9831973935410369 1.025476944802189 0.05665422363490291 0.089836466628626 428.01148235735775 1626779.2413129134 0.012831823157694553 0.01770867103795428 1.0152527336880572e-08 7.9934258324470955 0.042279551261152126 VIQLMPS(ph)PIMHPLILNPR ddPTM_A549_PD325901_60min_R1 1 VIQLMPSPIMHPLILNPR 18 0 P41212 P41212 ETV6 Transcription factor ETV6 1 VIQLMPS(1)PIMHPLILNPR 65.887 0.00049596 4537600.0 1398.8 1361.1 1222.1 1208.4 1618.8 1608.9 1171.1 1539.4 1595.6 1393.5 1697.4 True False 1540.8051462578658 1475.8046737808652 1305.0390550843003 1283.0401235244801 1505.1010725568258 1595.797651829094 1215.6668513505085 1508.6954593640628 1528.542480848467 1305.5141721838024 1488.6305607051343 1.0350487131797277 0.9913841034418951 0.8766708742470863 0.8618929084169344 1.0110642037631485 1.071990387644062 0.8166343506844785 1.0134787630917803 1.0268111653736487 0.8769900381229623 1.0 10.539770043706321 VIQNSTECTDAQQASLLPSVPALKGEIPS(ph)PQLTRPK ddPTM_A549_PD325901_60min_R1 1 VIQNSTECTDAQQASLLPSVPALKGEIPSPQLTRPK 36 2 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 VIQNSTECTDAQQAS(0.001)LLPS(0.048)VPALKGEIPS(0.763)PQLT(0.189)RPK 93.265 1.1024e-09 5770100.0 1566.6 1146.8 1593.9 1096.1 1420.1 1533.4 1337.7 1308.3 1295.9 1550.4 1330.1 True False 1725.6400787300338 1243.4448606949495 1702.0716388993267 1163.803607576285 1320.3570750790395 1520.9124987971493 1388.6069055175271 1282.2049301585055 1241.4378296136429 1452.5074794070806 1166.5061321985966 1.479323623852365 1.0659565572547323 1.4591193238661437 0.9976832315341387 1.1318903849999222 1.3038186914033432 1.1903982904061734 1.0991840460725597 1.0642360081500963 1.2451777485896598 1.0 10.187978176098431 -2.0000000003381424 0.12266383666155356 0.9250585224631179 2.2457362464883963 0.1233025916954702 0.15144865837213212 58.13972506305069 0.4702096174927532 0.40775543271114517 13.24798787406809 0.009999999992213984 2.0000000003381424 1.3206777240252783 VIQPMGMS(ph)PR ddPTM_A549_MK2206_60min_R1 8 VIQPMGMSPR 10 0 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3 H0YE35 RIC8A Synembryn-A 1 VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR 98.182 0.00049984 55600600.0 18225.100000000002 20689.899999999998 18597.3 17739.9 25048.9 19393.1 19035.999999999996 18271.7 28563.200000000004 29026.8 33749.200000000004 True False 21301.051319085054 21742.927536291954 21234.676785504293 22086.17629637437 21364.239992077182 21445.26496990208 22494.59479402486 20861.76942973444 22093.680806057662 22469.62572001188 25368.34220946507 0.8396706076890398 0.8570890189339825 0.8370541760344716 0.870619613769397 0.8421614552371525 0.8453553958248298 0.8867191481527713 0.822354462797762 0.8709154356099149 0.8857348869895147 1.0 14.630741623652572 -10.429232131960827 0.5624945711599315 1.0148589655177125 0.8483668176664659 0.3349208167540859 0.03748423586583346 0.2118112239761163 0.10864805672928157 0.017634242868511462 0.00391164158860444 3.721927147352967e-11 10.429232131960827 -0.16649214785124655 VIQPMGMS(ph)PR ddPTM_A549_PD325901_60min_R1 5 VIQPMGMSPR 10 0 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3 H0YE35 RIC8A Synembryn-A 1 VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR 134.75 7.256999999999999e-07 91859000.0 20151.600000000002 19737.1 19847.100000000002 20502.8 23838.8 22031.800000000003 20898.4 21792.399999999998 22978.2 22218.3 24994.500000000004 True False 22197.375597176157 21400.414684358468 21194.04355630769 21769.21139076277 22164.444927395405 21852.380325420007 21693.70004804327 21357.73348619293 22012.506162842965 20815.43274620119 21920.334953189875 1.0126385223847123 0.9762813720711075 0.9668667746896589 0.9931057822451244 1.011136233763162 0.9968999274913005 0.9896609743587141 0.9743342668714524 1.0042048266985846 0.9495946476480325 1.0 14.41998222308575 VIREEEEEEAS(ph)FENESIEEPEER ddPTM_A549_PD325901_60min_R1 2 VIREEEEEEASFENESIEEPEER 23 1 Q9UL42 Q9UL42 PNMA2 Paraneoplastic antigen Ma2 1 VIREEEEEEAS(1)FENESIEEPEER;VIREEEEEEAS(1)FENESIEEPEER 78.921 2.0955e-05 4571200.0 925.65 728.8599999999999 702.99 643.38 955.38 835.28 541.39 742.4200000000001 762.2800000000001 775.6500000000001 759.38 True False 1019.621306572486 790.2835901343926 750.6991288222829 683.1201213780041 888.2774046820734 828.4777566162014 561.9928927099755 727.6118506827772 730.244022500106 726.6753266267433 665.9810741064366 1.5310064297856172 1.186645718415851 1.1272079012598288 1.0257350365317264 1.3337877594703382 1.2439959464730896 0.8438571523432785 1.0925413333389875 1.096493655589076 1.0911351011013963 1.0 9.379337369052115 -7.703871894870438 24.99999347600337 1.037240839270619 1.2281146482051566 0.3816990094299627 0.1362750398005706 73.71981939993157 32014.129236902332 0.020374937700228107 0.0302209089773732 1.9775528787173095e-08 7.703871894870438 0.19087380893453765 VIREEEEEEASFENES(ph)IEEPEER ddPTM_A549_PD325901_60min_R1 2 VIREEEEEEASFENESIEEPEER 23 1 Q9UL42 Q9UL42 PNMA2 Paraneoplastic antigen Ma2 1 VIREEEEEEASFENES(1)IEEPEER;VIREEEEEEASFENES(1)IEEPEER 145.87 9.8546e-28 4619500.0 1101.63 1092.22 1120.87 1490.06 1338.97 1022.38 1034.08 1191.52 1188.08 1449.28 1353.04 True False 1213.466666622858 1184.2652125464238 1196.9389785388596 1582.0976220282087 1244.9253663957334 1014.0540762490085 1073.4324802702877 1167.7541988706428 1138.1491292594924 1357.7722134643273 1186.624657627239 1.0226204712864233 0.998011633193656 1.008692151174614 1.3332755322915275 1.0491315500598748 0.8545702044290057 0.9046099567968787 0.9840973650468975 0.9591483894623615 1.1442305742907053 1.0 10.212647951560438 -7.011453650053176 24.961380583668088 0.9657382500234115 1.0923068721618525 0.20292723014644332 0.10800419460883078 551.8642910002969 1202702.8178451983 0.013875595161840285 0.02497169339078201 9.73971726619021e-08 7.011453650053176 0.126568622138441 VIS(ph)ELNGK ddPTM_A549_PD325901_60min_R1 2 VISELNGK 8 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 1 VIS(1)ELNGK;VIS(1)ELNGK 91.584 0.0026065999999999997 8888900.0 3814.7 4461.3 3376.6 4518.6 6104.3 4436.5 3596.5 4694.1 4659.1 6057.0 4770.9 True False 4201.965535766282 4837.269407933709 3605.7563811452837 4797.7036595148265 5675.555026691766 4400.370614916889 3733.366775580315 4600.472493049787 4463.294229456688 5674.559986305911 4184.10954522689 1.0042675724300196 1.1561048666739437 0.8617738952983737 1.1466486734287125 1.3564546925321956 1.051686282912144 0.8922727130409935 1.0995105274664405 1.0667249939830767 1.3562168783987223 1.0 12.030704908303997 -7.509049295818833 24.96630264734726 1.0265188912494747 1.10742086515182 0.0 0.15704087367935093 1292.0227754784355 2332489.6967267143 0.01828160460380809 0.028520881208445512 3.0970677378646206e-08 7.509049295818833 0.08090197390234533 VIS(ph)HDRDSPPPPPPPPPPPQPQPSLKR ddPTM_A549_PD325901_60min_R1 2 VISHDRDSPPPPPPPPPPPQPQPSLKR 27 2 Q69YN4;Q69YN4-3;Q69YN4-4;Q69YN4-2 Q69YN4 KIAA1429 Protein virilizer homolog 1 VIS(0.5)HDRDS(0.5)PPPPPPPPPPPQPQPSLKR;VIS(0.5)HDRDS(0.5)PPPPPPPPPPPQPQPSLKR 41.913999999999994 0.018358000000000003 14276600.0 2491.9700000000003 2415.87 2675.4 2477.0 3069.1000000000004 2697.0 2285.5 2549.7 2945.7 3140.1 2854.3999999999996 True False 2744.9529599086445 2619.463843396501 2856.968732487143 2629.998664324842 2853.5370038202095 2675.0365261875004 2372.475953173589 2498.8442332990444 2821.9024729476855 2941.8335501071815 2503.3268955324247 1.0965219783350864 1.0463930412249958 1.1412687402455697 1.0506013693291447 1.139897873071547 1.0685925721333152 0.9477291828756526 0.9982093180713313 1.1272608775081705 1.1751695535079099 1.0 11.289630981509218 -7.520697761930922 24.996596560895835 1.046587880836192 1.0935401340310034 0.09973454574399632 0.06454587809340907 153.28746443220678 1756861.921329029 0.009614438543482134 0.014382495949934371 3.015103591865347e-08 7.520697761930922 0.046952253194811444 VIS(ph)PSEDR ddPTM_A549_MK2206_60min_R1 1 VISPSEDR 8 0 P17252 P17252 PRKCA Protein kinase C alpha type 1 VIS(0.736)PS(0.264)EDR 77.67699999999999 0.0044224 31970000.0 412.53 387.73 458.22 622.46 465.41 492.91 434.66 512.82 690.43 705.73 827.35 True False 482.15497860983794 407.46380087126994 523.2024862025014 774.9627279432916 396.94880552489906 545.0694090328225 513.6320956698281 585.5138054453839 534.048707390152 546.3051028492285 621.8961613016291 0.775298206698506 0.6551958771034185 0.8413020030666184 1.2461288172631488 0.6382879172209149 0.8764636975600425 0.825912954012766 0.9414976999052431 0.8587425692938635 0.8784506752796344 1.0 9.280529901832749 -14.999936748262199 0.021945543759876365 2.116192753048105 5.601379136785144e-05 0.07386289153490144 0.1522162716433294 2869.434096388854 4.887717058266157 324.1322507562721 170.3187316989007 1.000145653114952e-15 14.999936748262199 -2.116136739256737 VIS(ph)PSEDR ddPTM_A549_PD325901_60min_R1 2 VISPSEDR 8 0 P17252 P17252 PRKCA Protein kinase C alpha type 1 VIS(0.5)PS(0.5)EDR;VIS(0.5)PS(0.5)EDR 82.749 0.0034783 78798000.0 1553.75 1687.5 1559.95 1638.46 1832.79 1752.84 1833.5300000000002 1609.8200000000002 2050.1 1726.6100000000001 2282.19 True False 1711.485556189705 1829.7115472817645 1665.8175877413917 1739.663952987356 1704.061153182249 1738.5654521922493 1903.305987496115 1577.7108772206404 1963.941426414791 1617.5915499348941 2001.495097994375 0.8551035462963271 0.9141723849912256 0.8322866188434068 0.8691822201965967 0.8513941177721726 0.8686333800839192 0.9509421179214219 0.7882661710246539 0.9812371903297614 0.8081916121382577 1.0 10.966862366983658 -8.870800462239945 8.302021028631282 0.9916978133115973 0.8693250940709801 0.0 0.0680302177679374 0.09636707053609703 6.789010855515093 0.006299629828956498 0.006694831253582934 1.3464788552666148e-09 8.870800462239945 -0.12237271924061721 VIS(ph)PSEDRK ddPTM_A549_MK2206_60min_R1 2 VISPSEDRK 9 1 P17252 P17252 PRKCA Protein kinase C alpha type 1 VIS(0.639)PS(0.361)EDRK;VIS(0.744)PS(0.256)EDRK 69.01 0.0017579 11383200.0 2898.6 3296.9 2732.7 2483.7 3690.5 3284.3 3049.1000000000004 2779.6000000000004 3875.9 4292.4 4655.7 True False 3387.8128160339297 3464.698127801538 3120.2379513019405 3092.206611497529 3147.6323387757893 3631.8424460581036 3603.082001810318 3173.616812167989 2998.014838540459 3322.74385879873 3499.561199216769 0.9680678871374361 0.9900378734845289 0.8916083399256671 0.883598381474109 0.8994362891782706 1.0377993809255115 1.0295810807985635 0.9068613553259964 0.856683071926686 0.9494744254057873 1.0 11.77295832231945 -5.727392061381082 24.91756061562287 0.9354037514750364 0.9790529314525271 0.06157056127859395 0.05789751798440884 457.8472057857577 335069.5340561521 0.009602713058861533 0.03718699129631256 1.8733026117770646e-06 5.727392061381082 0.04364917997749074 VIS(ph)PSEDRK ddPTM_A549_PD325901_60min_R1 1 VISPSEDRK 9 1 P17252 P17252 PRKCA Protein kinase C alpha type 1 VIS(0.898)PS(0.102)EDRK 69.01 0.0017579 12856000.0 2491.5 2316.6 1992.5 2033.2 2550.4 2787.9 2468.2 2024.4 2638.6 3144.4 2974.0 True False 2744.435245854642 2511.8280121084067 2127.7230318758434 2158.78614626777 2371.2687024023553 2765.196266725298 2562.1287016508645 1984.021753888922 2527.708817978668 2945.86204737334 2608.21685373929 1.052226635956309 0.9630441611890151 0.8157768894198414 0.8276866025050065 0.9091532013539319 1.0601864882365717 0.9823296318239986 0.7606812873111045 0.9691329209665979 1.129454417545835 1.0 11.348848108528694 -8.981387408529342 24.98948866189335 0.9863822621895689 0.9187889487791215 0.16141923727430985 0.09929382901664356 212.6928932124487 285568.31103869557 0.016333918212827613 0.016589061344815595 1.0437887013803611e-09 8.981387408529342 -0.06759331341044739 VISELNGK ddPTM_A549_MK2206_60min_R1 2 VISELNGK 8 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ; 139.88 0.0029690000000000003 13570700.0 6131.200000000001 7716.4 7114.5 7170.299999999999 9722.5 7098.2 6623.299999999999 6252.6 9876.5 9080.3 10339.4 False True 7165.996666551864 8109.131800590791 8123.443079934734 8927.023821886993 8292.333129317865 7849.326812596175 7826.667876616138 7138.925197784418 7639.488519529623 7029.053923457761 7771.841627076891 0.9220461520453171 1.043399002411319 1.0452404294540527 1.1486368675843157 1.06697144991061 1.009969990285099 1.0070544733372118 0.9185628761286888 0.9829701743939102 0.9044257797236529 1.0 12.92404078695452 -7.54127818423815 2.906966167143917 0.9861171463956174 1.0503760414669068 0.2689655103004892 0.05910732550810375 0.30287817867651773 5.225577125630306 0.008400649060402313 0.013294668571012587 2.8755559078338955e-08 7.54127818423815 0.06425889507128935 VISELNGK ddPTM_A549_PD325901_60min_R1 4 VISELNGK 8 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ;;; 131.06 0.0029448 27508100.0 13581.900000000001 14274.7 14980.300000000001 14748.899999999998 17679.8 16831.6 15838.599999999999 16917.399999999998 17438.5 17478.1 17162.800000000003 False True 14960.724489533668 15477.679066064014 15996.953241861835 15659.906055817788 16438.03183999887 16694.529030099187 16441.34659021448 16579.96918555643 16705.620489017278 16374.529783168786 15051.884403953147 0.9939436211458322 1.028288462140929 1.0627874100375418 1.0403950519115701 1.0920912889605816 1.109132157945262 1.0923115105704913 1.1015211611113593 1.1098690396951096 1.0878724114349607 1.0 13.87765649444498 -5.392120376967904 1.4279957175907374 1.0657799095160505 0.9744218909562126 0.35512741929745073 0.0329582446275411 1.2675781285773493 2.746788585249806 0.006722473280098159 0.1530787146943725 4.053961528933613e-06 5.392120376967904 -0.09135801855983794 VISFIENTS(ph)TPVDR ddPTM_A549_PD325901_60min_R1 1 VISFIENTSTPVDR 14 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 VISFIENT(0.089)S(0.456)T(0.456)PVDR 178.84 2.9962999999999997e-23 4179400.0 2191.6 1742.2 2060.8 2243.9 2606.7 1851.8 2186.4 1883.4 1836.9 1924.1 2070.6 True False 2414.089618629351 1889.0213082514329 2200.658280597108 2382.500606733351 2423.61438462681 1836.7195547623335 2269.604648443986 1845.8341095012838 1759.70148099182 1802.6119976310385 1815.9293266148534 1.3293962398468184 1.0402504549958633 1.2118633959722669 1.3120007325255691 1.3346413591682924 1.0114488090713507 1.2498309351470451 1.0164680323447264 0.9690363249279916 0.9926663836589719 1.0 10.826492340745585 -8.33574063188921 4.961841145185953 0.9859379190381058 1.2068395161275631 0.5213719282992977 0.1005508403885155 0.12841038343108624 5.899068167851292 0.015956398437396328 0.01942041834954093 4.615931636104898e-09 8.33574063188921 0.22090159708945734 VISFIENTST(ph)PVDR ddPTM_A549_MK2206_60min_R1 2 VISFIENTSTPVDR 14 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 VISFIENT(0.01)S(0.122)T(0.868)PVDR;VISFIENTS(0.118)T(0.881)PVDR 138.42 2.1693e-09 5851000.0 2146.03 2524.8999999999996 2435.81 1737.82 3002.7 2550.0 2829.2 2045.57 3759.0 2988.6 3391.2 True False 2508.2273986039113 2653.4066252801417 2781.2444850004704 2163.5859780137043 2561.0068076526386 2819.839307446994 3343.229018242022 2335.5358117953924 2907.5925018895186 2313.473184327157 2549.071447641365 0.9839768912420064 1.0409306603529365 1.0910814161658486 0.8487741604950512 1.0046822383194938 1.1062221539753891 1.3115477878564308 0.9162300311183684 1.1406477070620717 0.9075748686714117 1.0 11.315756095728478 -7.189350035249886 6.863027185533643 1.0783152357073966 0.9933050819429133 0.07284838270554561 0.11813015291935147 0.4461964798847683 36.21096934292161 0.016042990807313313 0.02787734683860688 6.466212380334534e-08 7.189350035249886 -0.08501015376448329 VISFIENTST(ph)PVDR ddPTM_A549_PD325901_60min_R1 1 VISFIENTSTPVDR 14 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 VISFIENT(0.003)S(0.016)T(0.981)PVDR 119.39 2.7887e-06 4278300.0 1626.8 1666.8 1585.8 1282.8 1689.6 1740.7 1575.4 2118.5 1825.0 1508.3 2327.6 True False 1791.9515384131373 1807.2670856351085 1693.4219241900687 1362.0356425498203 1570.9283248035665 1726.5243163272455 1635.3527090919588 2076.2448555689 1748.3015966084542 1413.0656805919125 2041.3199558720814 0.8778396219849767 0.8853423886031712 0.8295720224155719 0.6672328062201983 0.7695649671599096 0.845788192762584 0.8011251270961648 1.0171089787254337 0.8564564274107409 0.6922313557593329 1.0 10.995286612340236 -8.238247193906432 24.19890765759959 0.9366885659727303 0.8087267451150122 0.06961163770724121 0.1003353003280114 429.96276843412386 448626.7931005446 0.012801540221625832 0.016520605241267465 5.77767097430224e-09 8.238247193906432 -0.12796182085771812 VISGTTLGYLS(ph)PK ddPTM_A549_MK2206_60min_R1 2 VISGTTLGYLSPK 13 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 VISGTTLGYLS(1)PK;VISGTTLGYLS(1)PK 182.33 4.3431e-25 16646300.0 6203.6 6437.2 6713.9 6512.9 8517.5 6550.1 6041.4 6131.7 8146.6 8550.1 8786.0 True False 7250.616016541811 6764.825984495752 7666.031976157681 8108.560792375188 7264.587033064021 7243.227234395516 7139.044178851746 7000.887252543692 6301.40810744697 6618.626471697655 6604.193718735859 1.097880577907955 1.024322767108449 1.160782421389219 1.2277896648263804 1.099996054394142 1.0967617763613962 1.0809864887213312 1.0600669136464649 0.9541525242619856 1.0021853921275583 1.0 12.689166723653507 -8.396497490818113 1.7639819400433427 0.9783758030554482 1.11849044219643 0.5544139381381136 0.04956474855653237 0.1814313284897269 1.0992800083682681 0.00945757259478718 0.011630494332413581 4.013308169869006e-09 8.396497490818113 0.14011463914098166 VISGTTLGYLS(ph)PK ddPTM_A549_PD325901_60min_R1 1 VISGTTLGYLSPK 13 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 VISGTTLGYLS(1)PK 182.57 4.254000000000001e-25 13150000.0 7837.3 7697.1 7616.8 8402.2 10338.0 8618.0 8654.3 8840.1 9550.2 10084.0 11071.0 True False 8632.936926484683 8345.761629974797 8133.721851539239 8921.184811219287 9611.894544163868 8547.817865288798 8983.644122314676 8663.777270575714 9148.838305715108 9447.294519053792 9709.337184851263 0.8891376169275483 0.8595603871905954 0.8377216381185796 0.9188253164323441 0.9899640275301771 0.8803708947944773 0.9252582283712599 0.8923139762921349 0.9422721789896575 0.9730112714381455 1.0 13.245157097014424 VISHDRDS(ph)PPPPPPPPPPPQPQPSLK ddPTM_A549_MK2206_60min_R1 2 VISHDRDSPPPPPPPPPPPQPQPSLK 26 1 Q69YN4;Q69YN4-3;Q69YN4-4;Q69YN4-2 Q69YN4 KIAA1429 Protein virilizer homolog 1 VIS(0.204)HDRDS(0.796)PPPPPPPPPPPQPQPSLK;VIS(0.327)HDRDS(0.673)PPPPPPPPPPPQPQPSLK 79.553 1.8085e-06 46502000.0 3848.9 4108.5 4880.5 4384.9 5326.6 3847.5 3948.7 4963.7 6210.0 6466.8 6277.6 True False 4498.500223429584 4317.6051011776535 5572.628287528501 5459.200696845643 4543.064196104351 4254.639896236201 4666.127677199307 5667.319675693717 4803.444915332248 5005.945388612346 4718.698667053973 0.9533349215193975 0.9149991143370182 1.1809671862364677 1.1569292896284873 0.9627790449566309 0.9016553495865635 0.9888590067804675 1.2010344536859348 1.0179596652081164 1.0608741396359835 1.0 12.204173329536413 -8.991101156032485 24.61634561943864 1.0079233005565513 1.0345892782358936 0.0 0.10125916853504029 162.33985955658528 449088.6614924265 0.018637364665414276 0.018679844154678323 1.020701713794672e-09 8.991101156032485 0.026665977679342312 VISHDRDS(ph)PPPPPPPPPPPQPQPSLK ddPTM_A549_PD325901_60min_R1 4 VISHDRDSPPPPPPPPPPPQPQPSLK 26 1 Q69YN4;Q69YN4-3;Q69YN4-4;Q69YN4-2 Q69YN4 KIAA1429 Protein virilizer homolog 1 VIS(0.23)HDRDS(0.77)PPPPPPPPPPPQPQPSLK;VIS(0.164)HDRDS(0.836)PPPPPPPPPPPQPQPSLK;VIS(0.085)HDRDS(0.915)PPPPPPPPPPPQPQPSLK;VIS(0.057)HDRDS(0.943)PPPPPPPPPPPQPQPSLK 91.398 6.1246e-09 68234900.0 7678.05 8155.2699999999995 7422.919999999999 7372.410000000001 9765.79 8937.029999999999 8710.39 7921.44 9532.81 9459.23 9507.529999999999 True False 8457.51998371833 8842.543223822553 7926.683988844088 7827.787021742069 9079.87460054654 8864.249790742846 9041.868657958303 7763.440664950536 9132.179146939758 8861.972603477712 8338.164083198359 1.014314410142213 1.0604904311778336 0.9506509958009324 0.9387902353127453 1.0889536965148898 1.0630937101135447 1.0843956256723142 0.9310731460171302 1.095226605739429 1.0628206059574725 1.0 13.025514047272214 -6.768007643176064 24.99787030836417 1.0441382642905874 0.9931342603146475 0.1982354123564477 0.053447431785802475 230.20714905792155 876139.4201076516 0.0082806827032414 0.015915451039361986 1.7060523638154262e-07 6.768007643176064 -0.05100400397593996 VISPS(ph)EDR ddPTM_A549_MK2206_60min_R1 1 VISPSEDR 8 0 P17252 P17252 PRKCA Protein kinase C alpha type 1 VIS(0.323)PS(0.677)EDR 88.948 0.0026726 35641000.0 951.6 957.11 788.81 855.21 1142.7 593.53 671.52 965.44 1335.9 1266.1 1262.8 True False 1112.2068156137054 1005.8228108526573 900.6751192470763 1064.7364883918358 974.6103437255366 656.3369506466726 793.5264917043274 1102.294076535999 1033.3207829939367 980.0871306553607 949.211908493016 1.1717160369168385 1.059639899007923 0.9488662238519557 1.1217057844145977 1.0267573921115714 0.691454610687179 0.8359845516099168 1.161272911426089 1.088609164874947 1.0325272174591265 1.0 9.890586389986368 -5.341667730373739 3.361788337660182 1.0129618089356767 1.180396250730235 0.13107011501436838 0.12770722912729607 0.47775649643348705 8.727395820880142 0.01840880034059289 0.17871076347924594 4.553362951969771e-06 5.341667730373739 0.16743444179455835 VISPS(ph)EDRK ddPTM_A549_PD325901_60min_R1 1 VISPSEDRK 9 1 P17252 P17252 PRKCA Protein kinase C alpha type 1 VIS(0.292)PS(0.708)EDRK 79.65899999999999 0.00072578 11659000.0 3346.5 3002.6 3490.6 3913.5 4274.2 4037.9 3611.3 3318.8 4044.5 3985.1 4727.7 True False 3686.2342164369084 3255.639639625616 3727.4931066829727 4155.228006796633 3973.994937189514 4005.016681161479 3748.729997679187 3252.6039304517676 3874.5237301276156 3733.4801058985813 4146.222871359529 0.8890583865860081 0.7852061359543139 0.899009344729398 1.0021718889014164 0.958461486631677 0.9659434153495592 0.9041313296431638 0.7844739733890023 0.9344706858117292 0.9004533093693512 1.0 12.017581952185939 -14.999999999266997 0.13974210166357795 1.35036903184815 0.8695514133461436 0.0 0.07244876215117022 77.05153588150594 0.7234494418319364 7.388377599723875 0.16928976583880903 1.0000000016878017e-15 14.999999999266997 -0.48081761850200644 VISRPPPSVS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 VISRPPPSVSPPK 13 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 VISRPPPS(0.03)VS(0.969)PPK;VIS(0.017)RPPPS(0.103)VS(0.88)PPK 77.506 0.00025392 84049000.0 9700.1 10706.3 10497.599999999999 10175.1 13298.599999999999 10868.1 9440.2 10982.9 15149.0 15183.5 14865.900000000001 True False 11337.239735324205 11251.20493969534 11986.317531228182 12667.999956777601 11342.393556548897 12018.155128339089 11155.362144071938 12539.759708720607 11717.775687982004 11753.536804601277 11174.286752032249 1.014582853197527 1.0068834986402244 1.0726695848438157 1.1336741429580455 1.0150440746910379 1.0755187686724943 0.9983064146839735 1.1221977730650254 1.0486374609861262 1.0518377651677573 1.0 13.447895127544575 -10.287043363189044 0.9050183005280777 1.0027493677802828 1.0547218971036147 0.011173633893347468 0.045352965990746244 0.6929133317355408 1.1019349433716255 0.02043058686752361 0.007969038481606988 5.1636480899753006e-11 10.287043363189044 0.05197252932333196 VISRPPPSVS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 VISRPPPSVSPPK 13 1 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 VISRPPPS(0.057)VS(0.943)PPK;VISRPPPS(0.112)VS(0.888)PPK 87.088 5.4414e-05 133596000.0 15604.8 16091.900000000001 15430.7 16178.8 18831.9 18300.8 17727.3 17673.1 20367.5 18338.1 19474.7 True False 17188.9878083534 17448.020887527964 16477.920094337063 17178.12773127925 17509.212310528103 18151.7643524109 18401.922102250774 17320.59615622126 19511.52480488916 17180.229236400286 17079.435360294738 1.0064142898021875 1.021580662326232 0.9647813142959022 1.0057784328874213 1.025163416773864 1.0627848034490093 1.0774315259291578 1.0141199513238688 1.1423987030770584 1.005901475896555 1.0 14.059972660341122 -7.061979231116719 2.331049980003143 1.0651250181065322 0.9985642814321658 0.21263480417312242 0.040733628435743734 0.33419360307580126 3.5876057688658918 0.007960277078675238 0.015484721702082349 8.67003336705345e-08 7.061979231116719 -0.06656073667436635 VISSANR ddPTM_A549_MK2206_60min_R1 1 VISSANR 7 0 P62917;E9PKZ0;G3V1A1;E9PP36 P62917 RPL8 60S ribosomal protein L8 0 86.866 0.035962 3787300.0 2763.5 3172.1 2573.9 2675.8 3090.7 2337.3 1933.7 2308.2 2721.6 3686.3 3344.1 False True 3229.9112389118072 3333.546340865434 2938.9177234442363 3331.371120121228 2636.0621242255334 2584.631534625829 2285.0282597817745 2635.3944185660366 2105.1619455021323 2853.562269753463 2513.667677535237 1.2849396393078016 1.3261682801817798 1.1691751259362875 1.3253029228540607 1.048691578359439 1.028231200856342 0.9090415094259183 1.0484259483139624 0.8374861817717835 1.1352185872682692 1.0 11.295578213790849 -7.025943373629254 1.4137532917358833 0.931464653954043 1.282476731686992 0.6351301454062668 0.09427546294418514 0.13377188491877326 0.5289006637935318 0.012411577470945855 0.02792023402248508 9.42012414723432e-08 7.025943373629254 0.35101207773294907 VISSANR ddPTM_A549_PD325901_60min_R1 1 VISSANR 7 0 P62917;E9PKZ0;G3V1A1;E9PP36 P62917 RPL8 60S ribosomal protein L8 0 100.19 0.031279 7287900.0 3326.3 3176.7 3457.8 3205.9 3157.3 3583.4 3217.9 3255.7 3440.6 3138.7 3911.9 False True 3663.983527307363 3444.411657629619 3692.4671014405494 3403.921161872831 2935.542140093692 3554.2179784724826 3340.358945402447 3190.7625094527575 3296.003547008794 2940.521946346105 3430.761099577246 1.0679797925185919 1.0039788716428129 1.0762821992751264 0.992176681230377 0.8556533244053114 1.0359852742035722 0.9736495338640924 0.9300450882009644 0.9607207996543223 0.8571048408787336 1.0 11.744312952249558 -6.506948147643289 24.703833527550096 0.9716015584136792 1.043096710389084 0.3305237180559518 0.057686772335691056 537.3939440005363 833344.524547893 0.006355543869095138 0.01437874062197875 3.112087880988659e-07 6.506948147643289 0.07149515197540479 VISSIEQKTS(ph)ADGNEK ddPTM_A549_MK2206_60min_R1 1 VISSIEQKTSADGNEK 16 1 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 1 VISSIEQKT(0.16)S(0.839)ADGNEK 90.96799999999999 2.7946e-06 6809700.0 2311.4 3758.8 3142.1 2987.7 3761.1 2904.6 2248.7 2495.5 4750.8 4692.8 4439.3 True False 2701.507811695586 3950.106864867122 3587.6970274036053 3719.686634122948 3207.8471722990444 3211.9628440825622 2657.2596823557315 2849.244767148229 3674.7513854686686 3632.693220708854 3336.8992915529357 0.8095862582770218 1.183765681771238 1.0751589166881788 1.1147134837239483 0.9613257374651446 0.9625591195435118 0.796326005127679 0.8538599814387084 1.1012473150661082 1.0886433492028647 1.0 11.7042924309457 -5.22317573868323 22.54785415792913 1.0223362685724062 0.8095842866360997 0.21551990916067731 0.11089152420066628 6806.102318573735 4010393.456938147 0.015948584427673405 4.77127168897602 5.9816949483684345e-06 5.22317573868323 -0.2127519819363065 VISSIEQKTS(ph)ADGNEK ddPTM_A549_PD325901_60min_R1 2 VISSIEQKTSADGNEK 16 1 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 1 VIS(0.002)S(0.002)IEQKT(0.104)S(0.892)ADGNEK;VISSIEQKT(0.043)S(0.957)ADGNEK 144.75 6.7210999999999995e-15 26510000.0 10032.1 10381.2 10091.8 11091.8 13571.8 12590.8 11786.400000000001 13001.4 12021.2 12092.1 13548.0 True False 11050.551406758315 11256.060156824562 10776.690234923277 11776.9152946945 12618.563588168236 12488.264699266429 12234.937901765554 12742.076877599007 11515.990768849075 11328.602742349298 11881.68188784798 0.9300494249101463 0.9473456925603037 0.9070004008393091 0.9911825115213165 1.062018299031714 1.0510519316325773 1.029731145577872 1.0724135688762209 0.9692222765724003 0.9534511064410548 1.0 13.536451447970432 -6.369791013811308 5.557973934137896 1.0053911487843499 0.9304530909565019 0.5126767676055484 0.03730071502511613 0.1742701872641965 7.530935622829913 0.005783696779500983 0.013650802909696115 4.2678484188223834e-07 6.369791013811308 -0.07493805782784801 VITEEMNGKEIS(ph)PGSGPGEIR ddPTM_A549_MK2206_60min_R1 1 VITEEMNGKEISPGSGPGEIR 21 1 O43491;O43491-4;E9PHY5;E9PK52;H0Y5B0;Q6R5J7;E9PMG5;E9PMV8 O43491 EPB41L2 Band 4.1-like protein 2 1 VIT(0.023)EEMNGKEIS(0.922)PGS(0.055)GPGEIR 40.104 0.021963999999999997 4086900.0 1997.5 2208.1 1697.6 1881.0 2448.0 1576.4 1619.7 1564.9 2756.3 2728.6 3385.0 True False 2334.629165813762 2320.482858442347 1938.3452066198904 2341.8450844412996 2087.90244284599 1743.2136016703694 1913.9785242636092 1786.7293673052536 2132.002450906645 2112.207364904997 2544.4110787526597 0.9175518788254379 0.9119921217997179 0.7618050490371707 0.9203878665664891 0.8205837729135881 0.6851147663312882 0.7522284980781856 0.7022172565689179 0.837915881089392 0.830136050948363 1.0 11.313116058023104 -10.189020156025935 0.9248211407266538 0.9871815462167904 0.8105703921694117 0.0706573231558919 0.09174106462866743 0.3855067829691217 0.6518133014747121 0.037357874363721635 0.016178722684135647 6.471125819323446e-11 10.189020156025935 -0.1766111540473787 VITEEMNGKEIS(ph)PGSGPGEIR ddPTM_A549_PD325901_60min_R1 1 VITEEMNGKEISPGSGPGEIR 21 1 O43491;O43491-4;E9PHY5;E9PK52;H0Y5B0;Q6R5J7;E9PMG5;E9PMV8 O43491 EPB41L2 Band 4.1-like protein 2 1 VITEEMNGKEIS(0.893)PGS(0.107)GPGEIR 67.31 0.00025471 8779700.0 2700.6 2803.9 3022.9 2905.8 3534.7 3802.9 3547.0 3148.4 3529.2 3610.5 3615.2 True False 2974.762923923357 3040.194493287908 3228.0521721743976 3085.2846664493854 3286.4348660530095 3771.9304432474755 3681.983025992874 3085.60269212798 3380.879997123593 3382.532413828214 3170.55331864098 0.938247247391649 0.9588845188041345 1.0181352741161482 0.9731060658433766 1.0365493135632555 1.1896757645016578 1.1613061368011033 0.9732063718930256 1.0663375308171028 1.0668587069458577 1.0 11.630518923259915 -6.151326974526316 1.3134573207878724 1.0482387514629248 0.9472256539935374 0.3103047483728688 0.06442114089498939 0.6138578673821091 1.859073895536327 0.010580247285807516 0.05284262818349949 7.057859773252166e-07 6.151326974526316 -0.10101309746938736 VIY(ph)DFIEK ddPTM_A549_PD325901_60min_R1 2 VIYDFIEK 8 0 O00401 O00401 WASL Neural Wiskott-Aldrich syndrome protein 1 VIY(1)DFIEK;VIY(1)DFIEK 143.01 0.0010378 25107700.0 6681.700000000001 6913.8 6619.1 6842.6 7658.0 7052.2 6948.700000000001 8559.400000000001 7619.3 7576.0 9027.4 True False 7360.021265192433 7496.450189983207 7068.311929881754 7265.251861327879 7120.128498665789 6994.769221349455 7213.136580974541 8388.676052280596 7299.0873178294805 7097.6500670717505 7917.087029403517 0.9296375343428486 0.9468697466810592 0.8927919957972584 0.9176672978767612 0.899336899066806 0.8835028837464288 0.9110846646229159 1.0595659768707393 0.921941023348761 0.8964976689925936 1.0 12.950753995110045 -8.088525849213429 24.999999995354226 0.9701021341285404 0.9108509255989453 0.3041976858162495 0.042144940067115146 61.78943473704482 17447.84758191042 0.006457295092647867 0.008336333592363835 8.155942415078123e-09 8.088525849213429 -0.05925120852959509 VIYSQPS(ph)AR ddPTM_A549_PD325901_60min_R1 2 VIYSQPSAR 9 0 A0A087WY82;Q9Y624-2;Q9Y624 A0A087WY82 F11R Junctional adhesion molecule A 1 VIYS(0.001)QPS(0.999)AR;VIYS(0.001)QPS(0.999)AR 89.171 0.0010978 58255000.0 19301.1 22059.9 21179.0 23083.4 24523.0 22226.1 22761.4 23513.9 22763.8 27315.7 29298.0 True False 21260.53346328115 23918.965192225773 22616.33429967301 24509.20919179493 22800.58907975727 22045.098010639973 23627.597532515992 23044.89681820231 21807.116649246884 25590.98204027347 25694.531735324046 0.8274341670158879 0.9308971044349768 0.8802002905770325 0.9538686847560031 0.8873712630618492 0.8579684672880439 0.9195574286350392 0.8968794238238986 0.8487065214450721 0.9959699715053293 1.0 14.649173739834895 -10.918151860151086 1.1359947134754182 1.0008744492725945 0.8886274199751864 0.5881403198695268 0.03503640733872951 0.2830600165280125 0.6405641461185999 0.025297445309667783 0.0057958558866509375 1.207391571562679e-11 10.918151860151086 -0.11224702929740815 VKAPVHFVEPLS(ph)PTGVAGHR ddPTM_A549_MK2206_60min_R1 2 VKAPVHFVEPLSPTGVAGHR 20 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 VKAPVHFVEPLS(0.993)PT(0.007)GVAGHR;VKAPVHFVEPLS(0.997)PT(0.003)GVAGHR 96.303 6.575700000000001e-07 10530900.0 1699.6799999999998 2461.0 1907.01 2060.54 2799.2 2215.1000000000004 1882.92 2142.8999999999996 2527.6000000000004 2255.2 3258.5 True False 1986.5444308136848 2586.25438821911 2177.4526934944606 2565.3723925011564 2387.4413880778166 2449.5004117356225 2225.022191088743 2446.662637356017 1955.1026357477929 1745.748753695577 2449.3245199750513 0.811058075241871 1.0559051555346588 0.8890013045378895 1.0473795414122122 0.9747346129953147 1.0000718123544416 0.9084227806250056 0.998913217665799 0.798221150281755 0.7127470204370302 1.0 11.258168219177143 VKAPVHFVEPLS(ph)PTGVAGHR ddPTM_A549_PD325901_60min_R1 1 VKAPVHFVEPLSPTGVAGHR 20 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 VKAPVHFVEPLS(0.989)PT(0.011)GVAGHR 79.445 9.900100000000001e-05 6148200.0 1019.9 887.17 1157.5 1113.9 1595.4 1046.1 1679.6 1602.6 1210.4 1277.1 1647.9 True False 1123.4394971893032 961.9349294233863 1236.0549106129436 1182.703073149552 1483.3446078312095 1037.5809084333496 1743.5180971123868 1570.6348857846208 1159.5310972793827 1196.46368804875 1445.2187468987813 0.7773491034488951 0.6655981535581044 0.855271849514358 0.8183557511189584 1.0263806852867363 0.7179403883736214 1.206404290598714 1.0867800387691922 0.8023222088473176 0.8278772266248127 1.0 10.497072158828562 -6.1954272343925325 1.4883467179530316 0.9337900319704667 0.7226289760041295 0.2723664656148813 0.13611036344771463 0.47774261245505883 1.9369822566792576 0.020523546178161222 0.0871716243895121 6.376359073459125e-07 6.1954272343925325 -0.21116105596633727 VKAQT(ph)PPGPS(ph)LSGSKSPCPQEK ddPTM_A549_PD325901_60min_R1 1 VKAQTPPGPSLSGSKSPCPQEK 22 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKAQT(0.998)PPGPS(0.311)LS(0.266)GS(0.228)KS(0.196)PCPQEK 49.445 0.0058422 117190000.0 2372.1 2231.0 2662.0 1954.1 2674.4 2811.5 2922.0 2897.7 2106.9 3073.1 2669.7 True False 2612.9138457522768 2419.0141996951816 2842.659327906396 2074.8003189169035 2486.559370179131 2788.604076149854 3033.1983089797513 2839.903100298326 2018.354319942112 2879.0639415414744 2341.3438246226556 1.115988953981754 1.033173417016206 1.2141144320674624 0.8861578966307053 1.0620223070312533 1.1910271557827614 1.295494611718806 1.2129372330678605 0.862049519902273 1.2296630299505373 1.0 11.193121093377343 -8.764444736905997 24.999986852490185 0.9348567154351587 1.123824596262984 0.0 0.1398438986860041 63.83699183637329 531024.9295734421 0.020344924769339297 0.022115946306398234 1.7201062073469657e-09 8.764444736905997 0.18896788082782534 VKAQT(ph)PPGPSLS(ph)GSKSPCPQEK ddPTM_A549_PD325901_60min_R1 1 VKAQTPPGPSLSGSKSPCPQEK 22 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKAQT(1)PPGPS(0.147)LS(0.4)GS(0.308)KS(0.145)PCPQEK 73.361 0.00010947 130250000.0 2792.7 2721.6 3012.4 3009.6 3735.7 3740.9 3368.9 3343.3 3007.8 3473.9 3827.3 True False 3076.2128481229215 2950.9587834560302 3216.839579032769 3195.496156702478 3473.317319465367 3710.435350691441 3497.105333032818 3276.615258731888 2881.392625906253 3254.557361140517 3356.5663632536575 0.9164760994449763 0.8791599700699928 0.9583721073563266 0.9520134002668585 1.0347828535404073 1.1054258873924852 1.041869861808104 0.9761806870863504 0.8584345769088865 0.9696091210262088 1.0 11.712770451130696 -5.791300107554013 11.025807121796952 0.9628133636321295 0.8978390175202693 0.14281485154856188 0.06403339004295558 0.9544688374497965 349.7404122827541 0.011456325300906874 0.03600610108763432 1.616962293067874e-06 5.791300107554013 -0.06497434611186026 VKAQT(ph)PPGPSLSGSK ddPTM_A549_MK2206_60min_R1 2 VKAQTPPGPSLSGSK 15 1 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKAQT(0.988)PPGPS(0.011)LSGSK;VKAQT(0.986)PPGPS(0.014)LSGSK 101.49 2.7936000000000002e-06 95785000.0 8634.0 9537.8 8586.2 7976.4 11261.3 9054.3 8958.599999999999 8864.0 13341.0 12948.8 13037.5 True False 10091.208118966726 10023.233280762379 9803.852269721783 9930.618358074196 9604.777687753898 10012.420016242084 10586.26165800331 10120.499144861513 10319.28480119928 10023.657086667828 9799.92893330512 1.0297225814231867 1.0227863231434626 1.0004003433538513 1.0133357522956037 0.9800864631897483 1.0216829208031102 1.0802386149991183 1.0327114832911628 1.052995881034313 1.0228295689576246 1.0 13.258555571855236 -7.5173840976730215 24.957011951421006 1.031030632495446 1.0088643084363058 0.247597501326547 0.02233132223158478 390.8997944543821 1775497.7799093681 0.00414864364083436 0.00625986545959802 3.0381968024436745e-08 7.5173840976730215 -0.022166324059140097 VKAQT(ph)PPGPSLSGSK ddPTM_A549_PD325901_60min_R1 2 VKAQTPPGPSLSGSK 15 1 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKAQT(0.999)PPGPS(0.001)LSGSK;VKAQT(1)PPGPSLSGSK 146.64 4.4220999999999997e-14 152479000.0 16441.9 14223.8 15773.7 15299.0 19459.5 18226.9 15973.4 17708.7 18128.2 17876.2 19977.6 True False 18111.069584112945 15422.489544430446 16844.198136963605 16243.98448345004 18092.73185163056 18078.466169509444 16581.276477979867 17355.48608629359 17366.33479651364 16747.493681228618 17520.4818484405 1.0337084185686944 0.8802548741433845 0.9614003931326186 0.9271425651398919 1.0326617731258914 1.0318475442568156 0.946393861847799 0.9905826926694029 0.9912018942595132 0.9558808842189072 1.0 14.096754832045404 -6.749160621297247 24.999805897725864 0.9964406900104029 0.9463695708913155 0.1823401281101965 0.04197906603671234 222.90735057907062 453841.0271014283 0.005166070171889271 0.010692896443569085 1.7817196868765192e-07 6.749160621297247 -0.05007111911908746 VKAQT(ph)PPGPSLSGSKS(ph)PCPQEK ddPTM_A549_MK2206_60min_R1 1 VKAQTPPGPSLSGSKSPCPQEK 22 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKAQT(0.993)PPGPS(0.027)LS(0.226)GS(0.188)KS(0.566)PCPQEK 57.078 0.0021398000000000003 38016000.0 2304.1 2647.2 2760.6 2415.4 3204.8 2783.4 2085.4 2584.2 3711.0 3741.2 4122.6 True False 2692.97575016345 2781.931172894606 3152.0945908310973 3007.1731084314256 2733.3781653728893 3077.9375405286146 2464.2901861451696 2950.5182637805865 2870.4644252492717 2896.060321623755 3098.8446420282776 0.8690257374118712 0.8977317336805103 1.0171838071778798 0.9704175122710087 0.8820636337495833 0.9932532592256775 0.7952286967610693 0.9521349420890596 0.9263014951825643 0.9345613143510819 1.0 11.597514713095844 -10.472412582801516 0.7833150044123168 1.0004685376975881 0.9239570928458437 0.03541648148089038 0.062026933931355305 0.885637323168158 0.9716029176170593 0.03947825611081041 0.011171471135614197 3.3696703550675706e-11 10.472412582801516 -0.07651144485174444 VKAS(ph)PITNDGEDEFVPSDGLDKDEYTFSPGK ddPTM_A549_MK2206_60min_R1 3 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VKAS(0.946)PIT(0.054)NDGEDEFVPSDGLDKDEYTFSPGK;VKAS(0.813)PIT(0.187)NDGEDEFVPSDGLDKDEYTFSPGK;VKAS(0.731)PIT(0.269)NDGEDEFVPSDGLDKDEYTFSPGK 220.76 2.5841999999999994e-92 65879000.0 6507.799999999999 7141.0 7669.0 6152.200000000001 9001.5 7524.900000000001 7009.8 6827.9 12544.2 10270.7 9934.4 True False 7606.157539565857 7504.446398322902 8756.579517888757 7659.48927618275 7677.391274214946 8321.179923375645 8283.389923679108 7795.775734566778 9702.958728971142 7950.541736689063 7467.414304508253 1.018579822867715 1.0049591588606905 1.1726387690317657 1.0257217510428658 1.028119100018319 1.1143321615826183 1.1092715076325994 1.043972574263127 1.2993732948650296 1.0646980885859159 1.0 12.866393061032051 -7.70266464097117 1.4773345103129887 1.1368540692180416 1.0540825989985843 0.032260124233119414 0.08478805152456866 0.7573367587044209 3.361312565773474 0.019305835311085578 0.031285385413271125 1.9830577374365502e-08 7.70266464097117 -0.0827714702194573 VKAS(ph)PITNDGEDEFVPSDGLDKDEYTFSPGK ddPTM_A549_PD325901_60min_R1 2 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VKAS(0.814)PIT(0.186)NDGEDEFVPSDGLDKDEYTFSPGK;VKAS(0.971)PIT(0.029)NDGEDEFVPSDGLDKDEYTFSPGK 253.43 3.7671999999999984e-139 195336000.0 5570.4 6020.0 6307.7 5408.61 8111.900000000001 6820.540000000001 6843.3 6889.5 7077.5 7182.200000000001 7678.1 True False 6135.902907288258 6527.326527191841 6735.778453281439 5742.68755585546 7542.148128535776 6764.995783582828 7103.725526297444 6752.083517791807 6780.057287669227 6728.714666278082 6733.742375486092 0.9112173536109365 0.9693460431385525 1.0003023694227982 0.8528225815055643 1.120052967276065 1.0046413133075172 1.0549446548710062 1.002723766559957 1.0068780344718478 0.9992533558714226 1.0 12.717192811185766 -6.752729064009734 24.99996017323494 1.0141000494757724 0.9407652809605149 0.4402943336659192 0.04913167828224717 161.67559144053405 464030.1936025752 0.006552613048741119 0.013470087697810927 1.7671399127191375e-07 6.752729064009734 -0.07333476851525744 VKASPIT(ph)NDGEDEFVPSDGLDKDEYTFSPGK ddPTM_A549_MK2206_60min_R1 1 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VKAS(0.398)PIT(0.602)NDGEDEFVPSDGLDKDEYTFSPGK 209.42 1.1165999999999998e-90 33175000.0 3044.6 3500.1 3613.6 3436.2 5331.5 4473.8 3969.3 3392.5 4936.5 5534.6 5002.2 True False 3558.4540466766375 3678.2401398641623 4126.0628172959705 4278.069154256881 4547.243412595343 4947.214546531908 4690.470430548584 3873.3972640955176 3818.390631970635 4284.33001605336 3760.015686303266 0.9463934045911394 0.9782512751909546 1.0973525542263338 1.1377796028460054 1.2093682026805732 1.3157430604753302 1.2474603357732565 1.0301545491433108 1.0155251867379205 1.1394447187175392 1.0 11.876522965316257 -8.4895548611395 20.48980193783958 1.0081475273624725 1.1361842853733706 0.09629502205884977 0.10863333905823094 82.15012837688656 50511.16081267078 0.01835522758107762 0.0221713712239103 3.2392550078995355e-09 8.4895548611395 0.1280367580108981 VKDAQQVEPEGQEKPS(ph)PATVR ddPTM_A549_PD325901_60min_R1 1 VKDAQQVEPEGQEKPSPATVR 21 2 E7EPN9;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8Y7F4;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 VKDAQQVEPEGQEKPS(0.895)PAT(0.105)VR 55.985 0.0012934 16446000.0 1738.1 1501.9 2391.4 1698.3 2172.9 2057.9 2323.3 2197.6 2178.2 2210.7 2494.0 True False 1914.550632478407 1628.4703839185092 2553.69478465641 1803.200133880854 2020.2830000980534 2041.141144694571 2411.714452858543 2153.7671440161516 2086.657828894542 2071.1160247195776 2187.2538107685914 0.8753216581689905 0.7445273959066835 1.1675347287469362 0.8244128436320874 0.9236618951817644 0.9331981202388775 1.1026221287099174 0.9846900864510677 0.9540080893315713 0.9469024648729708 1.0 11.094904926305945 -7.537873894348215 24.953471040465313 0.988143317051282 0.9099855051470933 0.1464563714295367 0.10381067580956942 378.28228820475886 629498.8518186847 0.01490481254129435 0.02211179391970783 2.898185008599345e-08 7.537873894348215 -0.07815781190418869 VKDRS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 VKDRSPLR 8 2 Q13325-2;Q13325 Q13325-2 IFIT5 Interferon-induced protein with tetratricopeptide repeats 5 1 VKDRS(1)PLR 41.283 0.018594 1548000.0 407.09 520.37 490.08 340.74 444.05 358.8 538.54 484.0 532.93 478.68 617.04 True False 475.7968396050688 546.8546103200232 559.5807132777308 424.2213152963997 378.73083322947826 396.76797784783594 636.3857470253283 552.6084821878352 412.22220591433427 370.5458555423015 463.8119385623461 1.0258400011864113 1.179043842672701 1.2064819094830421 0.9146407843906231 0.8165612002213886 0.8554501185926286 1.3720771159920988 1.191449456649881 0.8887701493671727 0.7989140096110147 1.0 8.857396145340832 -2.7317258285795183 0.22684652688858883 0.9603418779833601 1.6290727594978414 0.060792766533307896 0.1751864740405664 77.52216868858787 1.219801714665008 0.10999507360184486 18.142324046646735 0.0018547021329711898 2.7317258285795183 0.6687308815144812 VKDS(ph)SPGEK ddPTM_A549_PD325901_60min_R1 2 VKDSSPGEK 9 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 VKDS(0.5)S(0.5)PGEK;VKDS(0.674)S(0.326)PGEK 64.439 0.0052113 5446000.0 4213.799999999999 3924.1000000000004 3591.6000000000004 3430.7 3879.2 3572.2 3095.6000000000004 3132.3999999999996 3386.8999999999996 4205.1 4868.700000000001 True False 4641.581873964394 4254.797678630149 3835.347574045313 3642.6065473149906 3606.738374513493 3543.1091875591364 3213.4047519773185 3069.9218246797373 3244.560371262015 3939.5892683531442 4269.880765232175 1.0870518708060477 0.9964675625781307 0.8982329448810185 0.8530932706541101 0.8446929956174962 0.8297911305648554 0.7525748208574601 0.718971323432918 0.7598714225654946 0.9226462013720725 1.0 12.059980068369677 -5.596270508801712 1.644532076947088 0.8537053559975368 1.105378362395842 0.5216325843900603 0.07635183876736118 0.49966227254663603 2.0025009319816256 0.015214944823546869 0.16239207851041562 2.5335500677786693e-06 5.596270508801712 0.25167300639830514 VKDSS(ph)PGEK ddPTM_A549_MK2206_60min_R1 3 VKDSSPGEK 9 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 VKDS(0.356)S(0.644)PGEK;VKDS(0.2)S(0.8)PGEK;VKDS(0.099)S(0.901)PGEK 83.397 0.0007317000000000001 152782500.0 21141.3 17561.6 13157.5 11116.599999999999 9980.81 10183.009999999998 11035.05 12037.57 11015.130000000001 33521.6 34332.4 True False 24709.43458484029 18455.4104283416 15023.431347844726 13840.16749904313 8512.646070499059 11260.56935926502 13039.975744999168 13743.93241101202 8520.220642548104 25949.04727823771 25806.717553963907 0.9574807231167967 0.7151397844282158 0.5821519655271745 0.536300963890593 0.32986163593639667 0.436342566067082 0.5052938529563684 0.5325718926582724 0.3301551475785962 1.005515219980076 1.0 14.655459031257497 -10.94538866785944 1.200167246897201 1.0005499965787832 0.5225052205263719 0.5134783564301867 0.16903411417887437 0.3285056599034613 0.8394203011462709 0.12921644057383236 0.03005298775512082 1.1339955025533965e-11 10.94538866785944 -0.47804477605241125 VKDSS(ph)PGEK ddPTM_A549_PD325901_60min_R1 6 VKDSSPGEK 9 1 F8VXG7;Q99590;A0A0A0MTP7;Q99590-2 F8VXG7 SCAF11 Protein SCAF11 1 VKDS(0.442)S(0.558)PGEK;VKDS(0.252)S(0.748)PGEK;VKDS(0.158)S(0.842)PGEK;VKDS(0.299)S(0.701)PGEK;VKDS(0.346)S(0.654)PGEK;VKDS(0.09)S(0.91)PGEK 98.156 0.00031099999999999997 336185400.0 39279.299999999996 36409.9 32545.4 30188.8 35089.8 27730.5 22889.600000000002 29158.4 30747.9 38145.5 48249.6 True False 43266.90562010766 39478.290053555174 34754.12655538875 32053.493612260685 32625.213501238282 27504.67200201798 23760.67625366974 28576.81283767771 29455.672691702526 35736.98662004825 42315.20507941466 1.0224907462673736 0.9329575498798757 0.821315328382889 0.7574935192232813 0.7710044992103717 0.6499950065324945 0.56151627314761 0.6753320179837589 0.6961013809674765 0.8445424417293783 1.0 15.368888538190724 -5.617348762476156 2.2584670751007563 0.7931826426957928 1.0214609974423912 0.333885314055531 0.11478239556315295 0.4726422093884457 4.255947452171829 0.02226855256757271 0.15880570270530647 2.4135218645258245e-06 5.617348762476156 0.2282783547465984 VKEAVK ddPTM_A549_MK2206_60min_R1 1 VKEAVK 6 1 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 92.925 0.036897000000000006 11378000.0 5742.4 5041.4 4564.1 2135.3 5358.6 7432.2 8144.3 8058.3 6268.6 7968.1 6745.8 False True 6711.576731799223 5297.9857264395805 5211.358009857353 2658.4485958572595 4570.357038494498 8218.67047090492 9624.013888473246 9200.58870250874 4848.772108897218 6168.100675914213 5070.631685391343 1.3236174796792077 1.0448374197051724 1.0277532136422858 0.5242835135346819 0.9013387920999758 1.6208375959514436 1.8979911154265743 1.814485703825805 0.956246166107211 1.2164363453343918 1.0 12.307949770078805 VKEDDLDVVLS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 VKEDDLDVVLSPQR 14 1 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 VKEDDLDVVLS(1)PQR;VKEDDLDVVLS(1)PQR 95.814 1.3552999999999999e-05 9199800.0 2358.3 2133.3999999999996 2139.1000000000004 1768.05 2732.2 2436.8 2375.1 2159.2 1983.27 2158.6 2091.92 True False 2597.7128799112993 2313.1891051679495 2284.27218945326 1877.2584329671117 2540.299697578305 2416.9555087184663 2465.4857302045884 2116.1330621403686 1899.920058907207 2022.30562761102 1834.6271017734684 1.4159350842469203 1.2608497404905183 1.245088000305422 1.02323705517728 1.3846408870351299 1.3174096830806008 1.3438620457646633 1.153440423993943 1.0355892252276346 1.102297914195277 1.0 10.841271141685871 -8.589706803775213 2.835026499599926 1.0156900328649658 1.2767782875981077 0.5151613481290909 0.10075320040783717 0.13381871911304596 2.172320523839392 0.017033054137941355 0.019546498885464097 2.5721316666444274e-09 8.589706803775213 0.2610882547331419 VKEDDLDVVLS(ph)PQRR ddPTM_A549_PD325901_60min_R1 4 VKEDDLDVVLSPQRR 15 2 B1AKL4;Q9NRA8;Q9NRA8-3;B1AKL5 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 VKEDDLDVVLS(1)PQRR;VKEDDLDVVLS(1)PQRR;VKEDDLDVVLS(1)PQRR;VKEDDLDVVLS(1)PQRR 92.492 5.5316e-06 39905900.0 3623.96 3742.64 4162.25 4221.36 4329.86 4060.61 3974.84 4241.98 4569.03 4099.290000000001 4820.389999999999 True False 3991.861751381651 4058.0454075962202 4444.7253146425255 4482.103819795849 4025.745570806091 4027.541738450954 4126.104711315905 4157.370381131068 4377.009558329827 3840.460129810791 4227.512588969851 0.9442578034650814 0.9599132639330765 1.0513807401164013 1.0602224654493662 0.9522728758537119 0.9526977516186119 0.9760124007865681 0.9834081610964818 1.0353628679309042 0.908444398209734 1.0 12.045593335457566 -8.741375914600855 24.75425229510501 1.0166991326687282 0.9864331902127447 0.0 0.04946453863308845 372.5157350227912 459608.3162560849 0.006846255365817072 0.007757797352503805 1.813944877071471e-09 8.741375914600855 -0.030265942455983574 VKEDPDGEHAR ddPTM_A549_MK2206_60min_R1 1 VKEDPDGEHAR 11 1 A0A087X0X3;P52272-2;P52272;M0R019;M0R2T0;M0QYQ7;M0R0N3 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 73.881 0.0051979 5010400.0 1651.8 1576.4 1305.7 1593.1 2136.6 1818.4 1554.5 1476.6 1834.6 2367.2 2346.1 False True 1930.583457367296 1656.6320266512 1490.8678936637564 1983.409571516976 1822.3089703369048 2010.8218810437695 1836.9325282260784 1685.912571897845 1419.066029254193 1832.4478759081999 1763.4986209340075 1.0947462246070796 0.9394008064343099 0.8454034927876174 1.1247015154831799 1.0333486789866326 1.140245791617785 1.041641034713811 0.9560044742223442 0.8046879154930149 1.0390979920005123 1.0 10.784224732230932 -8.452902046619498 4.893457009397466 0.9065177296516418 1.0276438758097068 0.09870053510132826 0.09757222398294013 0.25475445110171513 11.627614093507209 0.017464513500223565 0.02100501305871879 3.5245035584416853e-09 8.452902046619498 0.12112614615806505 VKEDPDGEHARR ddPTM_A549_MK2206_60min_R1 1 VKEDPDGEHARR 12 2 A0A087X0X3;P52272-2;P52272;M0R019;M0R2T0;M0QYQ7;M0R0N3 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 34.0 0.059717 3104500.0 483.16 856.99 915.28 575.47 1023.2 664.08 500.77 668.37 1075.1 1470.9 1171.1 False True 564.7055958721293 900.607130499754 1045.080466962214 716.4601758338302 872.6886354248445 734.3525048193723 591.7534269281273 763.1134942972798 831.5915665819161 1138.6226684155836 880.2835492842657 0.6415042020622512 1.023087539500213 1.1872089030993933 0.813897040807322 0.9913721960775066 0.8342226836074058 0.6722304732483819 0.8668950986505953 0.944686024472524 1.2934726195228414 1.0 9.781824496769339 -9.087262275551968 2.4356247870851533 0.9795626026579024 0.8879476304848822 0.14718566178738135 0.17432880592810862 0.5807264538059037 7.102073928191815 0.02875657330574106 0.028019835495750444 8.179706568316898e-10 9.087262275551968 -0.09161497217302017 VKEDPDGEHARR ddPTM_A549_PD325901_60min_R1 2 VKEDPDGEHARR 12 2 A0A087X0X3;P52272-2;P52272;M0R019;M0R2T0;M0QYQ7;M0R0N3 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 ; 45.915 0.014554 8525200.0 1243.78 1009.6700000000001 1035.36 1120.37 1089.37 1549.87 1258.0700000000002 1258.98 1000.77 1325.55 1451.23 False True 1370.047629977558 1094.7584343371732 1105.6257557254576 1189.5727103551162 1012.8564093224793 1537.24837257776 1305.9465422923204 1233.8686562492962 958.7111171714213 1241.8545467802223 1272.7379101049319 1.076456998019807 0.8601601520983334 0.8686986903959696 0.9346564606196424 0.7958090988575751 1.2078279120726594 1.0260922786409739 0.9694601272209837 0.7532667248769069 0.9757347030527571 1.0 10.313719645990002 -10.987940836217039 0.003476819247450141 1.7381001212051525e-07 1.820813735168764 0.0 0.1283226428899825 313535.9553161775 222.19469653254006 59294.14317187585 57081.82623848172 1.0281563539611662e-11 10.987940836217039 1.820813561358752 VKEEAS(ph)SPLK ddPTM_A549_MK2206_60min_R1 2 VKEEASSPLK 10 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VKEEAS(0.5)S(0.5)PLK;VKEEAS(0.5)S(0.5)PLK 61.353 0.0062808 5071400.0 2369.7 2714.1000000000004 2531.6000000000004 2133.5 3293.3 2474.7 1966.8600000000001 2793.7 4133.4 3733.5 3798.5 True False 2769.6474263974337 2852.236097141602 2890.618947383905 2656.2075957764537 2808.8599326081285 2736.571111427087 2324.2130025517836 3189.7155303474274 3197.191499683464 2890.0997569716365 2855.227616733231 0.9700268413508437 0.9989522658109297 1.012395274703586 0.9302962678735633 0.9837604246143593 0.9584423656416216 0.814020216437595 1.1171492989399199 1.1197676433732053 1.0122134361667123 1.0 11.479390045466575 -8.304008208209401 24.99998957885945 1.0626816355833988 0.9572124382507707 0.4351231620647511 0.059990888132222316 389.2831357497867 228618.75823146367 0.010955327594607905 0.013244379576765627 4.965829358941939e-09 8.304008208209401 -0.10546919733262805 VKEEAS(ph)SPLK ddPTM_A549_PD325901_60min_R1 1 VKEEASSPLK 10 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VKEEAS(0.5)S(0.5)PLK 131.35 3.1224e-07 79019000.0 12155.0 11726.0 11856.0 12338.0 13664.0 12372.0 12482.0 12686.0 13392.0 13175.0 12817.0 True False 13388.96665196194 12714.191172400577 12660.619455919703 13100.090238368954 12704.287778240967 12271.246533923533 12957.009340412485 12432.967778025519 12829.180811934479 12343.128251540433 11240.590253657181 1.1911266534785194 1.131096400232537 1.126330483561618 1.1654272545079896 1.130215361609464 1.0916905835911084 1.1526983056959006 1.106077839104614 1.1413262580014818 1.0980854183813467 1.0 13.456430174331215 -11.398645630908698 0.3999265819371269 0.9149080894515034 1.143636298413336 0.32705184581927027 0.038928900163692624 1.1271223893979303 0.15626954087572484 0.11583331725905172 0.006933274897469917 3.993506255827303e-12 11.398645630908698 0.22872820896183255 VKEEASS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 VKEEASSPLK 10 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VKEEAS(0.088)S(0.912)PLK;VKEEAS(0.234)S(0.766)PLK 89.62899999999999 0.00018929 141884000.0 9181.8 9912.5 9719.8 8816.1 12129.7 9736.8 8799.2 9766.5 13948.9 12990.2 13457.3 True False 10731.463366542584 10417.003910289275 11098.21379553724 10976.044895769768 10345.437198116422 10767.141713235247 10397.90074131034 11150.931283651838 10789.496421816099 10055.704797914286 10115.481007414524 1.0608950141546953 1.0298080637642182 1.0971513650613731 1.0850739463328003 1.0227330949989766 1.064422117479442 1.02791955554944 1.1023629301936646 1.066632067610777 0.9940906211522297 1.0 13.304277303549664 -10.641381286005831 0.8899790669453058 0.9995280620626918 1.061661966820394 0.47889663086278145 0.02581110392972528 0.4372961777975317 0.6110151343997837 0.017583508562193016 0.004606132086843325 2.2835930574182842e-11 10.641381286005831 0.062133904757702085 VKEEASS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 VKEEASSPLK 10 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VKEEAS(0.07)S(0.93)PLK;VKEEAS(0.081)S(0.919)PLK 133.16 2.5389e-07 114563000.0 19766.9 18779.5 20215.9 21382.7 23974.9 22482.7 20638.7 22232.4 23676.6 23455.0 25603.2 True False 21773.621136377325 20362.114371660977 21587.872542082252 22703.460815364862 22290.98573291492 22299.608345315442 21424.117022429986 21788.95734101961 22681.554839594395 21974.04729714465 22454.16871205708 0.9696917047160902 0.9068300248731656 0.9614193613184328 1.0111022637490883 0.9927326198874361 0.9931166293117482 0.9541264830225493 0.9703747050461826 1.010126677609544 0.9786177158874458 1.0 14.454695691860994 -4.716505989787227 0.31337436947967606 1.004091452934148 0.859919590309118 0.18313713365512252 0.025975807745845677 7.448405149455484 0.395093707259375 0.008869051755896596 0.43647474896165717 1.9208524691820973e-05 4.716505989787227 -0.14417186262503 VKEEPPS(ph)PPQS(ph)PR ddPTM_A549_MK2206_60min_R1 1 VKEEPPSPPQSPR 13 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 VKEEPPS(1)PPQS(1)PR 45.70399999999999 0.020413999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VKEEPPS(ph)PPQS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VKEEPPSPPQSPR 13 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 VKEEPPS(1)PPQS(1)PR;VKEEPPS(1)PPQS(1)PR 67.64399999999999 0.0012423 28535000.0 5864.8 5644.3 5392.6 5271.7 7087.700000000001 5239.299999999999 5519.6 6238.6 6404.700000000001 6286.4 6932.5 True False 6460.190178562433 6119.964969672573 5758.574264338108 5597.320936100629 6589.884403237598 5196.63287788438 5729.651398441013 6114.1662289129745 6135.532731944203 5889.475631156266 6079.846448738276 1.0625581144245984 1.0065986075919109 0.9471578456612436 0.9206352468428239 1.0838899401160318 0.8547309412662575 0.9424006752062073 1.0056448432479443 1.0091591594747402 0.9686882194826619 1.0 12.569819172403117 -8.310912377751258 22.99858734678647 1.0045450028817715 0.9718048541402985 0.021034680754788315 0.0611521230849093 348.3890658136184 161954.98903777954 0.00952110917383293 0.011510481360466415 4.887509586572726e-09 8.310912377751258 -0.03274014874147302 VKEEPPS(ph)PPQSPR ddPTM_A549_MK2206_60min_R1 2 VKEEPPSPPQSPR 13 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 VKEEPPS(1)PPQSPR;VKEEPPS(0.999)PPQS(0.001)PR 96.208 4.6603e-05 89056000.0 4793.7 5496.5 5764.5 4817.7 6386.1 5539.8 5041.7 4862.9 8545.400000000001 9042.5 8200.8 True False 5602.759365287327 5776.248372550316 6581.992780136875 5998.036716274774 5446.713149615518 6126.017958978372 5957.711629178147 5552.230967006662 6609.880544199711 6999.792969711002 6164.315029434215 0.9089021794853936 0.937046264665108 1.0677573661807152 0.973025662646138 0.8835877341777321 0.9937872950566321 0.9664839646790357 0.9007052593021462 1.0722814315358558 1.1355345948880666 1.0 12.589724877823807 -8.769878814750083 24.999982503413197 1.0341328972527204 0.9571858472778427 0.3982256217350062 0.05889082483432043 166.91033982835606 494433.83268521586 0.009284963510561054 0.009963672722949237 1.698717595387872e-09 8.769878814750083 -0.07694704997487767 VKEEPPS(ph)PPQSPR ddPTM_A549_PD325901_60min_R1 2 VKEEPPSPPQSPR 13 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 VKEEPPS(0.998)PPQS(0.002)PR;VKEEPPS(1)PPQSPR 123.63 1.5419999999999998e-06 168405000.0 18565.2 19972.3 16812.3 18932.9 21493.0 19469.3 20408.6 19956.9 20274.0 21471.4 22751.2 True False 20449.925437022095 21655.43581379294 17953.283778572768 20102.342233264335 19983.40582682472 19310.748475825847 21185.260441014445 19558.84397361482 19421.95428473415 20115.692139667943 19952.946631739524 1.024907539445428 1.085325201007917 0.8997810754434709 1.0074873954349763 1.0015265512231033 0.9678143700894724 1.0617609936025518 0.9802483981239244 0.9733877729036415 1.008156464853644 1.0 14.284314197530103 VKEGMNIVEAMER ddPTM_A549_MK2206_60min_R1 1 VKEGMNIVEAMER 13 1 P62937;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed 0 87.566 0.00019575 4580100.0 1459.3 1844.1 1571.0 1437.4 1935.2 1420.2 1399.9 1502.4 2368.2 2169.1 2149.8 False True 1705.5941635404376 1937.9568132120507 1793.791422949957 1789.5630645273386 1650.5346435439387 1570.4846213475375 1654.2437094008937 1715.3698009070324 1831.8064812382966 1679.0988034946245 1615.9453285383963 1.0554776411174305 1.1992712742113065 1.110056999621652 1.107440352667115 1.0214050032477449 0.9718674225000066 1.0237002949209537 1.0615271263283172 1.133581965235881 1.0390814428192008 1.0 10.658162673605275 -6.6050367443969495 5.223716633256254 1.0519432703716933 1.126346921233645 0.3519567521708089 0.05081871755816296 0.23975990546948941 11.252797413258014 0.009033084326270853 0.019155689661576394 2.4829230234902924e-07 6.6050367443969495 0.07440365086195166 VKEGMNIVEAMER ddPTM_A549_PD325901_60min_R1 1 VKEGMNIVEAMER 13 1 P62937;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed 0 60.208999999999996 0.008318700000000002 4808000.0 3008.6 2954.1 3267.8 3281.7 3666.8 3821.3 3346.1 3915.8 3666.7 3850.6 3746.7 False True 3314.0308571857386 3203.052374414852 3489.5725588777327 3484.4031557185426 3409.2566177732706 3790.180599747977 3473.4376665561754 3837.696297114328 3512.6013502927244 3607.472458852494 3285.8796522881626 1.00856732682768 0.9747929666822602 1.0619903733990155 1.0604171559637419 1.0375476215019601 1.1534751728075732 1.0570800011307184 1.1679357442205471 1.0689987832776169 1.0978711458103423 1.0 11.682063926171443 -5.767187751476608 24.964480721085717 1.0555628693586443 0.9916801411313874 0.21244312996840786 0.050663159555756114 165.92084021090548 720589.0920309273 0.007765608149262035 0.025122054546625215 1.7092762117285535e-06 5.767187751476608 -0.06388272822725694 VKEHEDKDDAS(ph)GRSSPCLSTASQMSSVSMASGSVK ddPTM_A549_PD325901_60min_R1 1 VKEHEDKDDASGRSSPCLSTASQMSSVSMASGSVK 35 3 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 VKEHEDKDDAS(0.165)GRS(0.165)S(0.165)PCLS(0.165)T(0.165)AS(0.165)QMS(0.003)S(0.003)VS(0.003)MAS(0.001)GSVK 48.693000000000005 0.0012952 3185500.0 237.56 374.25 297.28 383.74 322.91 540.79 348.43 434.26 352.79 422.87 401.4 True False 261.67691631757134 405.78936093048907 317.4552084898624 407.44274826322754 300.22991557902446 536.3859855383532 361.68969431821193 425.59834362962033 337.96346316027234 396.16991603255406 352.03034468424715 0.743336250039132 1.1527113132660791 0.9017836481528407 1.157408031482861 0.8528523751221362 1.5236924703734374 1.0274389687702312 1.2089819814009495 0.9600407131476348 1.1253857004511865 1.0 8.45955598295153 -3.6489858523643552 14.13092887546341 1.026616122261079 0.6137060885879537 0.0 0.20321730538288976 0.0 0.0 0.023969642480615044 0.0 0.00022439550219737194 3.6489858523643552 -0.4129100336731253 VKELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(ph)SPQRDDLK ddPTM_A549_PD325901_60min_R1 1 VKELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 44 3 O00139-1;O00139-5;O00139;O00139-4;O00139-2;H0Y8H2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 VKELTVDPTAAGDVRPIMHHPPNQIDDLET(0.004)QWGVGS(0.498)S(0.498)PQRDDLK 99.48700000000001 3.3806e-12 7971700.0 1567.3 1532.2 1384.1 1846.3 1940.7 2108.1 1607.8 2132.4 2149.8 1672.8 2197.9 True False 1726.4111422147205 1661.3238712563682 1478.0333492694374 1960.341757748467 1804.39192705154 2090.9323325383275 1668.9857088219192 2089.867609164562 2059.451382130881 1567.1791225181664 1927.572233636041 0.8956401799574256 0.8618737302116871 0.766784934685107 1.0170004130276415 0.9360956209915196 1.0847491450912505 0.8658485942566512 1.0841967801239687 1.0684172277404476 0.8130326299429758 1.0 10.912569209215304 -6.279348919164005 23.750907094209968 1.0208227237086376 0.8434770390008343 0.2600607731163206 0.09250542556005609 210.96772584601345 279776.75566691457 0.009333637723248404 0.021739506317086665 5.255948253887202e-07 6.279348919164005 -0.17734568470780332 VKEPS(ph)VQEATSTSDILK ddPTM_A549_PD325901_60min_R1 2 VKEPSVQEATSTSDILK 17 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VKEPS(0.999)VQEAT(0.001)STSDILK;VKEPS(0.996)VQEAT(0.004)STSDILK 176.84 8.971e-31 36598000.0 11340.0 11695.400000000001 12620.900000000001 10932.8 13867.7 12992.900000000001 12317.5 13510.5 12980.2 12632.099999999999 13508.4 True False 12491.228451933228 12681.012403009872 13477.43016963706 11608.094225809698 12893.68059296782 12887.090130182265 12786.249202894633 13241.022478717783 12434.687333861408 11834.507050192331 11846.9524368029 1.0543832701757851 1.0704029133784603 1.1376284526786007 0.9798380037172107 1.0883542127605095 1.0877979124950437 1.0792859405068413 1.1176733045356175 1.0496106403899026 0.9989494862347968 1.0 13.532228361054694 -9.71396883097884 0.9778969929733011 1.0079474722703934 1.0755791390908949 0.353073262012492 0.03857404864572565 0.3736674400736883 0.74094967762973 0.011800149539124494 0.007444242137280571 1.9321069780517746e-10 9.71396883097884 0.06763166682050148 VKESIT(ph)R ddPTM_A549_MK2206_60min_R1 1 VKESITR 7 1 O75369-8;O75369;O75369-9;O75369-2;O75369-7;E7EN95;O75369-4;O75369-5;A0A0C4DGA1;Q60FE5;P21333-2;P21333 O75369-8;Q60FE5 FLNB;FLNA Filamin-B;Filamin-A 1 VKES(0.212)IT(0.788)R 55.06399999999999 0.016214 13384000.0 3181.6 3704.2 2990.5 2420.3 4968.6 3537.4 2797.8 3187.7 4586.1 4540.2 4898.1 True False 3718.5762973482197 3892.7279580825775 3414.5978678114884 3013.2736086513964 4237.725521864622 3911.7253200639207 3306.1240446902057 3639.566236921823 3547.355672496814 3514.5656666941545 3681.766589317106 1.0099978385750796 1.0572989524587435 0.9274346390450645 0.8184314609716469 1.151003307531952 1.0624588020908374 0.897972200161506 0.988538015278391 0.9634928196669788 0.9545867673664875 1.0 11.84618245260234 -3.2525549524073565 6.947849566209827 0.9850796647029608 1.0249649694812317 0.0 0.08510282309978134 0.0 0.0 0.010489386279227448 0.0 0.0005590427859612284 3.2525549524073565 0.0398853047782709 VKESIT(ph)R ddPTM_A549_PD325901_60min_R1 2 VKESITR 7 1 O75369-8;O75369;O75369-9;O75369-2;O75369-7;E7EN95;O75369-4;O75369-5;A0A0C4DGA1;Q60FE5;P21333-2;P21333 O75369-8;Q60FE5 FLNB;FLNA Filamin-B;Filamin-A 1 VKES(0.22)IT(0.78)R;VKES(0.367)IT(0.633)R 70.1 0.0085216 42836000.0 14050.0 15086.7 14432.0 14787.5 18076.7 20748.0 14374.6 15018.099999999999 15095.400000000001 14575.7 15306.2 True False 15476.345656936659 16358.109155778251 15411.44230666608 15700.890290150815 16807.054953229537 20579.03516697747 14921.633269082935 14718.552214028461 14460.99283366755 13655.387814495482 13423.63443399607 1.1529176940145203 1.2186050831621627 1.1480826882200978 1.1696452527333039 1.2520495128103886 1.5330449639525319 1.1115941321594025 1.0964655128534297 1.0772785049214626 1.0172645777593945 1.0 13.712487712042753 -7.988070558715021 24.99978801399354 1.0449635350537587 1.2440023841252201 0.45960397098178274 0.10169787995864099 158.6738403793075 332521.5005253366 0.016478126501837595 0.022759623364517086 1.0278492925115539e-08 7.988070558715021 0.1990388490714614 VKESITR ddPTM_A549_PD325901_60min_R1 1 VKESITR 7 1 O75369-8;O75369;O75369-9;O75369-2;O75369-7;E7EN95;O75369-4;O75369-5;A0A0C4DGA1;Q60FE5;P21333-2;P21333 O75369-8;Q60FE5 FLNB;FLNA Filamin-B;Filamin-A 0 48.794 0.056785 11002000.0 1839.6 1855.3 2416.5 1988.1 2241.7 2175.3 2766.2 2237.0 2420.6 2113.9 2429.9 False True 2026.354837758057 2011.6526421759165 2580.498221594969 2110.9004216973003 2084.2507254451684 2157.585078018416 2871.46925472272 2192.3812801074478 2318.8705998632477 1980.4279932395696 2131.037704405212 0.9508770462245891 0.943977968112668 1.2109115743286225 0.9905504803287691 0.9780449783392724 1.0124574865842713 1.3474511731007444 1.028785776795703 1.0881415167219959 0.9293256469116867 1.0 11.057340403581485 VKESSIIAPAPAEDVDT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 VKESSIIAPAPAEDVDTPPR 20 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR 102.53 6.4468e-10 73944000.0 3715.0 3842.3 4512.7 4169.3 5092.7 4213.9 3021.9 4575.2 6068.200000000001 6001.4 6494.4 True False 4342.001176970279 4037.8566582097874 5152.668716961345 5190.778687166992 4343.570576258895 4659.812101039561 3570.9401138928215 5223.748610962362 4693.762388924179 4645.679571846682 4881.661243678369 0.8894515535245432 0.8271480663347364 1.0555154198038474 1.0633221823593193 0.8897730422986052 0.9545545805895284 0.731501006653647 1.070076015153036 0.961509239298914 0.951659556029768 1.0 12.253156469371076 VKESSIIAPAPAEDVDT(ph)PPR ddPTM_A549_PD325901_60min_R1 1 VKESSIIAPAPAEDVDTPPR 20 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 VKESSIIAPAPAEDVDT(1)PPR 100.24 7.7703e-10 37362000.0 2149.0 1917.0 1938.1 2734.9 2838.3 2465.1 2019.3 2256.4 2246.6 2624.8 2726.9 True False 2367.164897989816 2078.5523177120863 2069.63112074207 2903.8285615914447 2638.9475996034366 2445.0250429013004 2096.145566503358 2211.394331888445 2152.1832147619484 2459.069680048829 2391.5085872433324 0.989820781165759 0.8691385549687749 0.8654081912069205 1.2142246016095883 1.1034656591575633 1.0223776974682144 0.8764951034190364 0.9246859257308779 0.8999270277522808 1.0282504077827184 1.0 11.223705256312932 -7.719880973786643 24.996420795437775 0.9437934704965897 1.0111611136401362 0.09519355630449844 0.0994809496450436 299.77132735676093 180304.91451108523 0.016141268724656772 0.023941236265677457 1.905983015311082e-08 7.719880973786643 0.06736764314354649 VKESSIIAPAPAEDVDT(ph)PPRKK ddPTM_A549_MK2206_60min_R1 1 VKESSIIAPAPAEDVDTPPRKK 22 3 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 VKESSIIAPAPAEDVDT(1)PPRKK 66.012 0.00022753 3777400.0 871.02 1003.9 934.2 1144.8 1185.0 1040.3 1406.4 1268.9 1514.9 1348.7 1522.0 True False 1018.0268816055583 1054.9942219964091 1066.6836074601208 1425.2760513920248 1010.6880697600081 1150.383855504748 1661.9246752635297 1448.7704608432734 1171.7775687981996 1044.0277332871697 1144.0453949369426 0.8898483277944315 0.9221611543260119 0.9323787431694651 1.2458212389995094 0.8834335370194949 1.0055403925367443 1.4526737161117034 1.2663574953012477 1.024240448835324 0.9125754431664963 1.0 10.159928583064291 -6.032573152464019 24.556876090689133 1.0652415997124942 0.9113209217089184 0.18394102581598648 0.16225730385826226 742.1854639185229 559533.2581593981 0.02311280301976087 0.061212494145609385 9.27741208446967e-07 6.032573152464019 -0.15392067800357578 VKESSIIAPAPAEDVDT(ph)PPRKK ddPTM_A549_PD325901_60min_R1 1 VKESSIIAPAPAEDVDTPPRKK 22 3 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 VKESSIIAPAPAEDVDT(1)PPRKK 89.565 4.6378e-07 4365200.0 889.92 1022.8 1264.6 1327.9 1364.8 1482.7 1354.8 1589.9 1614.4 1231.9 1370.3 True False 980.2640232755211 1108.9949455169117 1350.423360657562 1409.9213671202901 1268.9411563043957 1470.625382787618 1406.3576553750072 1558.1881972475783 1546.5523822272269 1154.1176237626303 1201.7617870473928 0.8156891272803163 0.9228076291571894 1.1237030293461199 1.1732120144910951 1.0559007367192594 1.2237245339617562 1.170246608381754 1.2965865731809372 1.286904275785761 0.9603547360231687 1.0 10.230935238361674 -5.662102318047836 2.4254659575075146 1.155293807591445 0.819813773481125 0.5271231073297731 0.10219914258532797 0.20154662912301397 2.192059129075127 0.016226436579959605 0.09853028638278759 2.177196773048839e-06 5.662102318047836 -0.3354800341103199 VKGDVDVSLPK ddPTM_A549_MK2206_60min_R1 2 VKGDVDVSLPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 117.23 1.2403e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VKGDVDVSLPK ddPTM_A549_PD325901_60min_R1 1 VKGDVDVSLPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 89.62899999999999 0.00016788 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VKGEILLEEEKS(ph)TDFVFIPPEGK ddPTM_A549_MK2206_60min_R1 2 VKGEILLEEEKSTDFVFIPPEGK 23 2 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VKGEILLEEEKS(0.876)T(0.124)DFVFIPPEGK;VKGEILLEEEKS(0.877)T(0.123)DFVFIPPEGK 158.12 1.3817999999999999e-33 75625000.0 17282.5 17887.8 17789.800000000003 17151.4 25569.0 20727.5 19062.1 18958.0 28748.0 23719.0 24172.0 True False 20199.363483442496 18798.21261502875 20312.661143217814 21353.493769955596 21807.83397104948 22920.870292199055 22525.436826180983 21645.354556440037 22236.623901122613 18360.861426439078 18169.42528673835 1.1117227520776771 1.034606891432573 1.1179583736225156 1.175243213968978 1.200248969182683 1.261507721376786 1.239744046424079 1.1913065061138024 1.223848500995398 1.010536169233732 1.0 14.149225166260416 -4.166648640258605 16.136192165428888 1.135983884736894 1.145773769919712 0.0 0.08964274881609462 0.0 0.0 0.013951599092376971 0.0 6.813203482653711e-05 4.166648640258605 0.009789885182817981 VKGEILLEEEKS(ph)TDFVFIPPEGK ddPTM_A549_PD325901_60min_R1 1 VKGEILLEEEKSTDFVFIPPEGK 23 2 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VKGEILLEEEKS(0.817)T(0.183)DFVFIPPEGK 104.66 7.1052e-11 36884000.0 6230.0 7167.7 7253.6 8700.8 8520.8 8976.4 8568.3 8512.6 9889.7 8516.5 8519.9 True False 6862.4650137164 7771.747234045339 7745.872915440215 9238.22865504949 7922.328403164199 8903.299174515932 8894.37134525367 8342.809514994487 9474.07030135816 7978.766736565017 7472.006312095954 0.9184233426847075 1.0401151858590045 1.036652351711871 1.2363785935370948 1.060267894894474 1.1915540221242786 1.1903591851702722 1.1165420860912345 1.2679419563686922 1.0678211986583444 1.0 12.867279958449716 -5.537261543711788 1.3981796373378725 1.1382223099889033 0.8952605458353998 0.4135513705331444 0.07889313920176128 0.750585185278865 1.8453454549631667 0.014721719470511398 0.22055690269715858 2.9022743011294563e-06 5.537261543711788 -0.24296176415350346 VKKMS(ph)DDEDDDEEEYGKEEHEK ddPTM_A549_MK2206_60min_R1 2 VKKMSDDEDDDEEEYGKEEHEK 22 3 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 VKKMS(1)DDEDDDEEEYGKEEHEK;VKKMS(1)DDEDDDEEEYGKEEHEK 67.33 0.00016688 7415200.0 1097.06 1609.96 1142.75 1184.11 1868.86 1510.87 1434.03 1096.43 2059.8500000000004 2053.9700000000003 1909.66 True False 1282.216907458146 1691.9000873048508 1304.8091334029693 1474.2170031567175 1593.9531696638717 1670.7492605656632 1694.5746886150166 1251.8523101760504 1593.2972639045302 1589.976750455882 1435.438718065231 0.8932578530321333 1.1786641017913282 0.9089967526873374 1.0270149359937526 1.1104292712769348 1.1639293545165048 1.1805273658070645 0.8721043221290359 1.109972333790794 1.1076590943561468 1.0 10.487276024799247 -5.223939155033584 22.884699388020234 1.0557422192116988 0.8932566339957233 0.1912918998394051 0.10009181509618387 8452.739140305448 5158029.4175736075 0.01299759194038126 3.7864366199867083 5.971189375126071e-06 5.223939155033584 -0.16248558521597545 VKLESPTVSTLTPS(ph)SPGK ddPTM_A549_MK2206_60min_R1 1 VKLESPTVSTLTPSSPGK 18 1 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 1 VKLESPTVSTLT(0.001)PS(0.678)S(0.322)PGK 153.82 5.0363e-19 10044000.0 1848.3 2452.7 2703.6 2385.5 3390.1 2273.3 2773.2 2380.7 3991.9 3616.8 3817.0 True False 2160.2478534035436 2577.5319536712736 3087.0111337285225 2969.947607089163 2891.4207808383157 2513.859097105589 3277.0545431177625 2718.1715155879733 3087.741023754397 2799.762368023308 2869.133556159206 0.7529269067193166 0.8983659711964446 1.0759384578321898 1.03513745489942 1.0077679286247465 0.876173607083942 1.1421756704503585 0.9473841012917783 1.0761928517150774 0.9758215549126399 1.0 11.486399410776304 -5.477226343264352 3.0170141305360922 1.027095415127071 0.7554205848434398 0.5627414095627057 0.06879229037873054 0.1340843830624979 2.1722774980230506 0.008779917336749845 0.0669467623575695 3.3325268465240636e-06 5.477226343264352 -0.27167483028363126 VKLESPTVSTLTPS(ph)SPGK ddPTM_A549_PD325901_60min_R1 1 VKLESPTVSTLTPSSPGK 18 1 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 1 VKLESPTVSTLT(0.002)PS(0.604)S(0.394)PGK 136.14 1.9957e-13 25978000.0 2781.5 2791.0 3509.5 3137.2 3527.1 3010.7 2714.6 3393.1 3850.5 3729.2 3511.0 True False 3063.8758323679235 3026.207365015351 3747.675774337903 3330.9777189018546 3279.3686638344343 2986.181857394404 2817.9055884861186 3325.4219586645445 3688.6768754744403 3493.7376755707455 3079.169258062759 0.9950332624116749 0.9827999409552663 1.2171061283898796 1.0817780510700212 1.0650173436382089 0.969801140218301 0.9151512477293915 1.0799737461514909 1.1979454737071353 1.134636449887399 1.0 11.58832545735703 -8.504864183929557 24.84736368754133 1.0958682195391642 1.0354174644310044 0.1367175053680285 0.08544995181032387 1581.9622537058788 2181993.6541021015 0.017039183159084446 0.020390618688952332 3.127057132736713e-09 8.504864183929557 -0.06045075510815989 VKLESPTVSTLTPSS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 VKLESPTVSTLTPSSPGK 18 1 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 1 VKLESPTVSTLTPS(0.095)S(0.904)PGK 151.82 6.1475999999999996e-18 11437000.0 1918.9 1937.8 2279.1 2092.4 2731.1 1934.0 1763.1 2269.6 3428.2 2910.2 2630.0 True False 2242.7634073992635 2036.4257429869922 2602.3106505698584 2605.038093931406 2329.358807866292 2138.654596314701 2083.432448063943 2591.3227503584944 2651.718173710468 2252.783798778321 1976.8984156926128 1.1344859147016435 1.0301114750367806 1.3163603298544453 1.3177399876759588 1.1782895819915933 1.0818232132405328 1.0538894823960925 1.31080217870002 1.341352773951933 1.1395546583960667 1.0 10.94902302374041 -11.075686114704173 1.4219888997702643 1.00096647368863 1.212103067480967 0.10202203451812719 0.11581609594553385 0.43103107712886574 1.5677535283024435 0.0851422823130779 0.019146809905533163 8.400669235172479e-12 11.075686114704173 0.21113659379233707 VKLESPTVSTLTPSS(ph)PGK ddPTM_A549_PD325901_60min_R1 1 VKLESPTVSTLTPSSPGK 18 1 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 1 VKLESPTVSTLT(0.001)PS(0.489)S(0.511)PGK 142.23 3.3106999999999995e-17 22323000.0 2696.6 3467.9 3015.2 3664.1 4024.2 3408.5 3687.2 3334.7 3547.1 3846.1 3376.4 True False 2970.3568468679996 3760.1521035961073 3219.829603870538 3890.423135225129 3741.5540747363375 3380.7423060845754 3827.518413713259 3268.1867924784565 3398.0277223725197 3603.2565896204674 2961.1242047630594 1.003117951651636 1.2698393730150823 1.0873672906699905 1.3138331478859495 1.2635586405723653 1.1417090511254298 1.2925896210488497 1.1036979763366486 1.1475465017329187 1.2168542554967867 1.0 11.531929290489138 -10.025884134930019 0.5706870471694783 0.9970644787244197 1.1959619924547846 0.0 0.11082077256568056 0.6546826743771469 0.41323745066002304 0.06078336957917821 0.020877387032428682 9.421409160018836e-11 10.025884134930019 0.1988975137303649 VKLNFDMT(ph)ASPK ddPTM_A549_MK2206_60min_R1 2 VKLNFDMTASPK 12 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 VKLNFDMT(0.505)AS(0.495)PK;VKLNFDMT(0.625)AS(0.375)PK 92.773 0.00010542 23329000.0 5345.1 6393.3 6520.4 6247.1 9842.0 6888.0 6540.3 6984.6 11188.4 8976.3 9501.0 True False 6247.222204851638 6718.691662007813 7445.090766519994 7777.639780442973 8394.254837618566 7616.883588115643 7728.587850985541 7974.6884394404 8654.245264203431 6948.5475956889 7141.639485739744 0.8747602308021769 0.9407772088500879 1.0424904227364282 1.0890552226800554 1.1753960493777396 1.066545518480015 1.082186781679165 1.1166467385204852 1.211800915109762 0.9729625262607551 1.0 12.802039592310091 -5.738856095616207 1.7309536108631318 1.1044852944885348 0.8697017563327823 0.529976431308609 0.06545389940837922 0.2801109679759745 1.4311941753189374 0.010978473339952523 0.08002282213628627 1.8245001541082593e-06 5.738856095616207 -0.23478353815575248 VKLNFDMT(ph)ASPK ddPTM_A549_PD325901_60min_R1 2 VKLNFDMTASPK 12 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 VKLNFDMT(0.642)AS(0.358)PK;VKLNFDMT(0.821)AS(0.179)PK 72.958 0.00046389 35182000.0 6547.200000000001 8738.8 7532.7 7270.3 8558.5 8984.2 8511.1 9023.4 9294.5 9672.7 9853.7 True False 7211.8669242061 9475.249344821263 8043.914319804854 7719.369918950699 7957.380485222138 8911.035653902016 8834.994567952626 8843.42120827964 8903.8844874944 9061.964071246697 8641.757367750788 0.834537075886817 1.0964493611196364 0.9308192740776363 0.8932639034460462 0.9208058206907545 1.031160130363775 1.022360868510722 1.0233359757682412 1.0303326173819478 1.048625144818811 1.0 13.07710901000576 -7.264567954557481 24.786177728997856 1.017130310753869 0.9415643793791474 0.35258916579601385 0.06033685129213826 240.86837900256478 1908285.943616122 0.008323307787781196 0.013668386291257453 5.4379103745361845e-08 7.264567954557481 -0.07556593137472156 VKLNFDMTAS(ph)PK ddPTM_A549_MK2206_60min_R1 2 VKLNFDMTASPK 12 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 VKLNFDMT(0.206)AS(0.794)PK;VKLNFDMT(0.003)AS(0.997)PK 103.39 5.454e-05 20444100.0 5524.5 7243.6 7057.3 6257.2 9386.4 6703.700000000001 6209.7 6252.6 9692.3 9221.8 9974.8 True False 6456.900538942747 7612.268300082865 8058.131259824786 7790.214280896383 8005.672994088889 7413.08108444408 7337.922110341261 7138.925197784418 7497.009525422665 7138.588975181743 7497.781869524977 0.8611747649244195 1.0152693733360292 1.0747353550757952 1.0390025232075646 1.0677388504229837 0.9887032209585656 0.9786790597585304 0.9521382886318491 0.9998969903211707 0.9520934456891594 1.0 12.872248139051466 VKLNFDMTAS(ph)PK ddPTM_A549_PD325901_60min_R1 3 VKLNFDMTASPK 12 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-6;H7C4X9;Q9ULU4-4;Q9ULU4-3;A0A087WYS3;Q9ULU4-18;Q9ULU4-17;Q9ULU4-15;Q9ULU4-8;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 VKLNFDMT(0.499)AS(0.501)PK;VKLNFDMT(0.076)AS(0.924)PK;VKLNFDMT(0.044)AS(0.956)PK 105.39 4.5568e-05 61951000.0 20476.0 21305.9 24000.699999999997 24388.0 25184.4 27199.2 24358.6 27248.8 27091.699999999997 24874.9 28046.8 True False 22554.7084463655 23101.42296606255 25629.531829933545 25894.39137083335 23415.53462546339 26977.698733066005 25285.57985253738 26705.30130772994 25953.13006292453 23304.294568823017 24597.221403313757 0.9169616387372483 0.9391883167319992 1.0419685788769912 1.052736443122996 0.9519585257832753 1.0967783023423754 1.0279852117414727 1.0857039854156934 1.0551244645636317 0.9474360614440558 1.0 14.586207731940444 -5.710808754851127 5.1066111046446485 1.03302643703556 0.9238388874810148 0.41918021080219925 0.04568072780174247 0.11038927110840793 6.1004129324168614 0.005270094225185791 0.021041064036442896 1.9462169255880844e-06 5.710808754851127 -0.10918754955454513 VKPAPDET(ph)SFSEALLKR ddPTM_A549_PD325901_60min_R1 2 VKPAPDETSFSEALLKR 17 2 B4DY09;Q12905;X6R6Z1;A0A0A0MRL0 B4DY09 ILF2 Interleukin enhancer-binding factor 2 1 VKPAPDET(0.483)S(0.483)FS(0.035)EALLKR;VKPAPDET(0.492)S(0.492)FS(0.017)EALLKR 86.74799999999999 3.3866000000000003e-06 10398200.0 3486.6000000000004 3800.2 4004.4 3988.4 4859.8 4535.7 4415.1 4737.1 4782.6 3940.5 5155.299999999999 True False 3840.557065300738 4120.456190803058 4276.162664413365 4234.75440968639 4518.464413399844 4498.762763006544 4583.119046535425 4642.614824316939 4581.603953939507 3691.696157510064 4521.230782139261 0.8494494641752272 0.9113571921788579 0.9457961494259447 0.9366375249888657 0.9993881381259401 0.995030552472244 1.0136883665927094 1.026847566078068 1.0133532603641349 0.8165246003574507 1.0 12.142499845263057 -5.399650214889587 0.6010258038215301 1.0093814309615545 0.7706613910311683 0.2185409998214597 0.0597489865616278 0.5410692576270765 0.14486516268648203 0.0025368391351151096 0.0860585378638522 3.9842793919995866e-06 5.399650214889587 -0.23872003993038626 VKPAPDETS(ph)FSEALLK ddPTM_A549_MK2206_60min_R1 2 VKPAPDETSFSEALLK 16 1 B4DY09;Q12905;X6R6Z1;A0A0A0MRL0 B4DY09 ILF2 Interleukin enhancer-binding factor 2 1 VKPAPDET(0.136)S(0.86)FS(0.004)EALLK;VKPAPDET(0.162)S(0.834)FS(0.004)EALLK 85.146 2.36e-05 3478400.0 4017.3 3962.7999999999997 4614.6 4285.3 5847.4 4868.200000000001 4155.9 4796.9 7109.5 6361.8 5900.7 True False 4695.32202644487 4164.489593512672 5269.019669220163 5335.198692374426 4987.255206003943 5383.3496927503775 4910.973235159061 5476.875264890135 5499.209601538587 4924.664961538013 4435.393338964793 1.0586033002296802 0.9389222725587291 1.1879486815593083 1.20286934768668 1.1244223059522278 1.2137254311715304 1.1072238378536383 1.2348116269138876 1.239847107409438 1.11031076280766 1.0 12.114846335752368 -5.764422408537341 24.995178349548564 1.1402217378463022 0.9987627787242238 0.3935148968018567 0.07356810778490135 76.44926798828092 640606.9665517244 0.013613254410766589 0.04514761046521401 1.7201946453871805e-06 5.764422408537341 -0.1414589591220784 VKPAPDETSFSEALLK ddPTM_A549_PD325901_60min_R1 1 VKPAPDETSFSEALLK 16 1 B4DY09;Q12905;X6R6Z1;A0A0A0MRL0 B4DY09 ILF2 Interleukin enhancer-binding factor 2 0 106.28 8.255500000000001e-07 2947000.0 3773.4 3682.4 3671.5 3710.1 4727.3 4673.6 3608.6 4858.4 4666.4 4116.2 4682.6 False True 4156.472790169738 3992.7287713839246 3920.670068523042 3939.264450751551 4395.2707562996575 4635.53975112714 3745.927247701687 4761.49540065893 4470.28743584312 3856.3024295249124 4106.669885447073 1.0121273211901334 0.9722546205949192 0.9547078722876742 0.9592357215541572 1.0702761310022282 1.1287831455735555 0.912156894075231 1.1594541400886351 1.0885431652747666 0.9390339465050758 1.0 12.00375326563628 -6.7585500474668825 24.99319249408316 1.050118887445976 0.9729956411007988 0.16890291299200588 0.07132888114883103 85.22385610868791 737188.0895649504 0.0091897872999554 0.01849030127935567 1.743612414519395e-07 6.7585500474668825 -0.07712324634517709 VKPAPLEIKPLPEWEELQAPVRS(ph)PITR ddPTM_A549_MK2206_60min_R1 1 VKPAPLEIKPLPEWEELQAPVRSPITR 27 3 B7Z3B9;Q13480;Q13480-2 B7Z3B9 GAB1 GRB2-associated-binding protein 1 1 VKPAPLEIKPLPEWEELQAPVRS(0.935)PIT(0.065)R 55.063 0.00088438 2747300.0 736.96 900.29 1104.7 649.31 1094.2 965.87 777.8 1336.7 1243.7 754.39 1301.4 True False 861.3408310578782 946.1109155504998 1261.3630712494078 808.390979148634 933.2446294779756 1068.0777223073828 919.1161919937247 1526.1813184720636 962.0039357807918 583.9727750533904 978.226463187212 0.8805127068955971 0.967169618850757 1.2894387125243916 0.8263842878619048 0.954016952718005 1.0918511842619976 0.9395740419852301 1.560151330909134 0.9834163887229501 0.5969709438760401 1.0 9.934024683066813 -7.251080730448204 23.642534372256 1.0411656266978964 0.9908644279048874 0.007028209292253007 0.23642633782770034 1769.2490618417553 4038111.9028253225 0.028724394761055164 0.049390591429132644 5.609436932314513e-08 7.251080730448204 -0.05030119879300898 VKPAS(ph)PVAQPK ddPTM_A549_MK2206_60min_R1 2 VKPASPVAQPK 11 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 VKPAS(1)PVAQPK;VKPAS(1)PVAQPK 123.76 1.7077000000000002e-06 491530000.0 8353.5 9502.4 9063.3 8067.0 10736.0 8600.3 8324.7 7953.700000000001 11699.0 10712.7 11294.8 True False 9763.366576533299 9986.031571968006 10348.612223820726 10043.41536214139 9156.748621893199 9510.378037582892 9837.190233337824 9081.161332184676 9049.195179464086 8292.693629706724 8489.989439378298 1.1499857150880328 1.1762124845115542 1.21891932819395 1.1829714788051426 1.078534748161445 1.1201872635402612 1.1586810918410493 1.069631640537078 1.0658664824118718 0.9767613598249633 1.0 13.051547043886098 -8.367128261355814 0.31585380135680036 0.9916887011228867 1.2011352570877463 0.7937416848121792 0.03355599451032193 0.44786600850881036 0.13046254986560749 0.025265278587490187 0.03246916961253222 4.294095893488158e-09 8.367128261355814 0.20944655596485962 VKPAS(ph)PVAQPK ddPTM_A549_PD325901_60min_R1 4 VKPASPVAQPK 11 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 VKPAS(1)PVAQPK;VKPAS(1)PVAQPK;VKPAS(1)PVAQPK;VKPAS(1)PVAQPK 103.21 6.0305e-05 775055000.0 14173.600000000002 14256.2 14761.800000000001 13887.0 17274.9 16078.100000000002 14501.2 14721.8 15852.3 16386.2 17149.0 True False 15612.493437947163 15457.62000613825 15763.624517914606 14744.768450334715 16061.570619169703 15947.165284277062 15053.051101361125 14428.162149971315 15186.0829588582 15351.572535513615 15039.781716467742 1.0380797894727642 1.0277822043928335 1.0481285443560857 0.980384471550541 1.0679390779710025 1.060332229876434 1.0008822857368238 0.9593332152004084 1.0097276174048635 1.0207310734240564 1.0 13.876496007811356 -7.794579881700301 22.58576216871052 1.0003426166778473 1.0360078577451433 0.3663527968710577 0.025423775102205167 58.487923050409684 39860.11188585959 0.0038175819081396377 0.005275099153916184 1.604797053545655e-08 7.794579881700301 0.03566524106729596 VKPAS(ph)PVAQPKEEAK ddPTM_A549_MK2206_60min_R1 1 VKPASPVAQPKEEAK 15 2 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 VKPAS(1)PVAQPKEEAK 48.111999999999995 0.0090737 1837900.0 582.16 769.34 890.77 612.89 977.88 586.0 598.98 723.25 1055.8 1201.8 1253.1 True False 680.414375554513 808.496119883173 1017.0945804081058 763.0480775136774 834.0351473898032 648.010131044682 707.806912677296 825.7729023602313 816.6629857661492 930.3125453136506 941.9206861993968 0.7223690757869977 0.8583484063243316 1.0798091551763578 0.8100980142951723 0.8854621833979395 0.687966768900013 0.7514506508326745 0.8766904840918018 0.8670188453566551 0.9876760951789004 1.0 9.879461773557331 -10.14616614133128 0.7444381227107626 0.9949047874661773 0.838532693348656 0.27150918436600224 0.09886879980952391 0.6907389762807823 0.7453302799289062 0.05584200132808601 0.02110810904941558 7.14223044528943e-11 10.14616614133128 -0.1563720941175213 VKPAS(ph)PVAQPKEEAK ddPTM_A549_PD325901_60min_R1 2 VKPASPVAQPKEEAK 15 2 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 VKPAS(1)PVAQPKEEAK;VKPAS(1)PVAQPKEEAK 70.942 0.00055266 5760600.0 1935.62 1614.1100000000001 2323.6 2132.0 2581.8 3263.6 3112.2 2878.2 2976.0 2723.5 2857.6000000000004 True False 2132.122717471868 1750.1367144195383 2481.293468941886 2263.688797876691 2400.463274726474 3237.0223236431307 3230.6364740611866 2820.792043095778 2850.9290693187736 2551.5377452045836 2506.133315818896 0.8507618904444365 0.6983414263608995 0.9900883776931504 0.9032595287681315 0.9578354270200133 1.291640114757986 1.2890920262179086 1.1255554623893043 1.1375807708726036 1.0181173240462076 1.0 11.291247446710136 -6.565426635936336 1.4422010522867261 1.1019586501426981 0.8131443262344109 0.5608830110540399 0.1133586180211597 0.2793901033500729 1.1365381398292889 0.01896359385800161 0.05791274903171193 2.7200279334482544e-07 6.565426635936336 -0.2888143239082872 VKPAS(ph)PVAQPKEEAKTETEFPDEDEETR ddPTM_A549_PD325901_60min_R1 1 VKPASPVAQPKEEAKTETEFPDEDEETR 28 3 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 VKPAS(0.988)PVAQPKEEAKT(0.006)ET(0.006)EFPDEDEETR 47.191 0.0021726999999999996 6515700.0 970.25 1137.7 832.12 1418.9 989.29 2176.3 1757.7 1493.8 1801.8 1696.0 1891.1 True False 1068.7490657397018 1233.5779717584978 888.5926671440534 1506.5422304442936 919.8056832652231 2158.5769343499646 1824.5902353503454 1464.0049871365704 1726.0766119282816 1588.9142705588288 1658.506688670601 0.644404435050167 0.7437883610510424 0.5357787660514756 0.9083727191066582 0.554598717960255 1.301518377402627 1.100140414153452 0.8827248012548348 1.040741423425818 0.9580391091653931 1.0 10.695669115113285 -7.246872996256286 24.99997748833292 1.0326950379914988 0.6860427096702764 0.6495233329219199 0.1349642901602131 386.9447626292555 664105.2191186855 0.01829181526054621 0.03159540818548341 5.664049025304734e-08 7.246872996256286 -0.3466523283212224 VKPET(ph)PPR ddPTM_A549_MK2206_60min_R1 7 VKPETPPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKPET(1)PPR;VKPET(1)PPR;VKPET(1)PPR;VKPET(1)PPR;VKPET(1)PPR;VKPET(1)PPR;VKPET(1)PPR 93.84299999999999 0.0010098 1111369400.0 61613.1 57658.49999999999 49494.2 47121.99999999999 67213.9 55223.299999999996 48000.0 56255.9 72499.6 73443.3 80933.7 True False 72011.88498433039 60593.07137063449 56513.221798707724 58666.89211538697 57326.82434771498 61066.99295174025 56720.97867793619 64230.34610146823 56078.55635807115 56852.40752141287 60835.6286335138 1.1837123508354723 0.9960129077593572 0.9289494177689009 0.964350881763847 0.9423232016400033 1.0038031055719048 0.9323644704920352 1.0558014693725761 0.9218045020279116 0.9345248631176861 1.0 15.892628870952986 -5.27284321230046 3.7189396897251514 0.966106911997041 1.2043841517259914 0.7204936021315721 0.038989202338575245 0.09902585653473013 2.5690157470075428 0.005336340186834322 0.06364714456049278 5.335274732219341e-06 5.27284321230046 0.23827723972895043 VKPET(ph)PPR ddPTM_A549_PD325901_60min_R1 3 VKPETPPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKPET(1)PPR;VKPET(1)PPR;VKPET(1)PPR 90.10799999999999 0.0010489000000000002 1618973000.0 48631.0 49803.5 47918.6 47859.3 59739.0 47944.7 47899.5 48163.3 49159.2 53433.5 57862.4 True False 53567.98331974999 54000.61573039845 51170.64435395025 50815.46026464348 55543.1387283619 47554.25425921464 49722.341684112136 47202.645198122074 47093.20977972294 50059.699690981855 50745.69161997455 1.0556163806163306 1.0641418809462575 1.0083741638040544 1.001374868337423 1.0945390033170614 0.9371091956996072 0.9798337572472932 0.9301803501194601 0.9280238041171182 0.9864817700361646 1.0 15.630997720224615 -7.274479322610576 24.980076826960186 0.9615794263327785 1.0414461017099967 0.6306826994087185 0.032156398480740686 455.7584823457344 873076.852311887 0.005490458625311158 0.008810334444993895 5.315213054035565e-08 7.274479322610576 0.07986667537721825 VKPET(ph)PPRQSHSGSIS(ph)PYPK ddPTM_A549_PD325901_60min_R1 1 VKPETPPRQSHSGSISPYPK 20 2 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKPET(0.657)PPRQS(0.144)HS(0.207)GS(0.105)IS(0.866)PY(0.021)PK 50.986000000000004 0.005028899999999999 64992000.0 982.53 995.95 1019.8 1219.5 1383.1 1199.2 844.65 1522.2 1191.6 1188.8 1237.9 True False 1082.2757222996431 1079.8822017868285 1089.0097605555763 1294.825745314552 1285.9558274359683 1189.4341127934933 876.793617960215 1491.838526857201 1141.5211959006222 1113.7389651181227 1085.6461476946424 0.9968954659838692 0.9946907692528975 1.0030982589198851 1.1926775110509995 1.184507337097526 1.0956001781236395 0.8076237545926696 1.374148040800498 1.0514670901975103 1.0258765873974085 1.0 10.084338236650863 -9.523668170152039 2.2144696887841335 1.0152220000599992 1.0797422261678844 0.03224481842159732 0.136786934148674 0.7683964054761375 7.571100873962253 0.02890320968895222 0.023990772358491987 2.9945517993213226e-10 9.523668170152039 0.06452022610788521 VKPETPPRQS(ph)HSGSIS(ph)PYPK ddPTM_A549_MK2206_60min_R1 2 VKPETPPRQSHSGSISPYPK 20 2 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKPET(0.221)PPRQS(0.69)HS(0.1)GS(0.046)IS(0.831)PY(0.111)PK;VKPET(0.201)PPRQS(0.552)HS(0.171)GS(0.111)IS(0.958)PY(0.008)PK 73.109 0.00014627 80967000.0 2728.3 4151.4 4112.7 3816.5 5104.4 4330.8 3854.0 3211.4 6176.700000000001 6756.9 7447.3 True False 3188.77033946918 4362.688527936941 4695.942702206426 4751.542671329198 4353.549521757793 4789.0823814476225 4554.221913015961 3666.6257845000305 4777.687312163072 5230.5115971291425 5597.929874976277 0.5696338487060261 0.7793396175680799 0.838871298334427 0.8488035358516053 0.777707048675068 0.8555095344898221 0.8135546558691504 0.6549967338623671 0.853473948203633 0.9343653303894431 1.0 12.450677699108171 -14.999999999999941 0.1265038467257154 1.7720992913907305 0.6855508197699098 0.42305113264796423 0.08619182189728525 45.66057010941022 0.3977526533268205 8.8056149879478 0.27691873272819945 1.000000000000135e-15 14.999999999999941 -1.0865484716208207 VKPETPPRQSHS(ph)GSIS(ph)PYPK ddPTM_A549_PD325901_60min_R1 1 VKPETPPRQSHSGSISPYPK 20 2 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKPET(0.18)PPRQS(0.325)HS(0.39)GS(0.115)IS(0.929)PY(0.061)PK 57.147 0.0023556 57726000.0 919.22 1082.9 1223.2 1565.7 1422.1 1546.3 1246.4 1418.8 1742.6 1729.9 1326.8 True False 1012.538537706002 1174.1597834378806 1306.2137076991387 1662.4097330373038 1322.2166019786648 1533.7074454741319 1293.8324340562508 1390.500920972932 1669.3645820547358 1620.67381877342 1163.6120112781737 0.8701685165605806 1.0090646814036586 1.1225508975833995 1.4286632631191423 1.1363036726703013 1.318057420006713 1.111910517866721 1.1949867374139007 1.4346402115779266 1.392795711169383 1.0 10.184394378376934 -5.687398604380061 2.407519978165726 1.2179811522115744 0.8902364800883187 0.4347711012255894 0.13573703057264058 0.28913782603759447 3.128892368873967 0.02315765131101026 0.1351183053119523 2.0540045231127114e-06 5.687398604380061 -0.32774467212325575 VKPFMTGAAEQIK ddPTM_A549_MK2206_60min_R1 1 VKPFMTGAAEQIK 13 1 J3KPG2;E9PJF7;Q5W0H4;A0A0B4J2C3;P13693-2;P13693;Q56UQ5 J3KPG2 TPT1 Translationally-controlled tumor protein;TPT1-like protein 0 56.122 0.004856 1369800.0 2200.8 2650.2 2547.9 2781.8 3584.8 2574.9 2868.6 2505.7 3707.0 3325.2 3743.8 False True 2572.2412356059726 2785.0838600805705 2909.2305324851686 3463.3411248797474 3057.4806687558444 2847.374208919711 3389.7874882401607 2860.890648384417 2867.370418862582 2574.0350105483026 2814.1111363764276 0.9140510487862618 0.989685099525517 1.0338008669519787 1.2307051701374156 1.0864818482943037 1.0118200991116912 1.2045677387869618 1.0166231928097285 1.0189257921614046 0.91468847028648 1.0 11.458463590042879 -8.48780442262388 24.989250338702746 1.0094022651739798 1.0709649829661463 0.13807743589281052 0.08988117962909851 1088.9682173645624 775854.2646045969 0.01408180193953669 0.017019571717062327 3.2523372807123066e-09 8.48780442262388 0.06156271779216649 VKPFMTGAAEQIK ddPTM_A549_PD325901_60min_R1 1 VKPFMTGAAEQIK 13 1 J3KPG2;E9PJF7;Q5W0H4;A0A0B4J2C3;P13693-2;P13693;Q56UQ5 J3KPG2 TPT1 Translationally-controlled tumor protein;TPT1-like protein 0 78.814 0.00024082 3380500.0 3154.1 2873.8 3323.6 3204.4 3900.8 3702.2 3566.4 3221.7 3810.9 3749.6 3511.8 False True 3474.301910074301 3115.9852116019774 3549.15948243039 3402.328510279579 3626.8212650294454 3672.050510660496 3702.121303608962 3157.4406661252438 3650.741125761731 3512.849616089259 3079.8708631343784 1.1280673977799545 1.0117259294536933 1.1523728234561166 1.1046984310300063 1.1775887451782432 1.192274180912721 1.2020378347426297 1.0251860569608178 1.1853552593586274 1.1405834115116888 1.0 11.588654145640252 -10.943358391489094 1.1229993962497817 0.9976791405930225 1.134518420530801 0.0 0.07311266243976335 0.4300937683138056 0.9362700301028526 0.04722894027934249 0.01028679912087414 1.1393092109114314e-11 10.943358391489094 0.13683927993777845 VKPLLQVSR ddPTM_A549_PD325901_60min_R1 2 VKPLLQVSR 9 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 85.37700000000001 0.005853499999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VKPPGGHS(ph)PQVNHLK ddPTM_A549_MK2206_60min_R1 2 VKPPGGHSPQVNHLK 15 1 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 VKPPGGHS(1)PQVNHLK;VKPPGGHS(1)PQVNHLK 55.864 0.005596899999999999 70372000.0 2394.3999999999996 2418.4 2492.3999999999996 2313.0 2496.7 2036.24 2069.19 1595.5 2981.3999999999996 3604.8999999999996 3655.0 True False 2798.5161825404116 2541.486230178422 2845.8597979379215 2879.6851038345167 2129.4387373584914 2251.71356525328 2445.135038970809 1821.667011013824 2306.1176603174827 2790.5505862882146 2747.362627131752 1.0186191494721117 0.9250639886703761 1.0358515362455085 1.0481634551609627 0.7750846998969432 0.8195909571660986 0.8899935577574378 0.6630602720674137 0.8393932557512696 1.0157197883999576 1.0 11.423831630400546 -6.741143279767312 24.99868497117192 0.8831713678222045 1.0031435738355003 0.32809102575904736 0.09852905960961937 301.88190858842813 371825.764485097 0.015653737205934305 0.03255507023966016 1.814916797791945e-07 6.741143279767312 0.11997220601329583 VKPPGGHS(ph)PQVNHLK ddPTM_A549_PD325901_60min_R1 2 VKPPGGHSPQVNHLK 15 1 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 VKPPGGHS(1)PQVNHLK;VKPPGGHS(1)PQVNHLK 107.75 1.702e-06 107792000.0 3053.2 2670.3 3462.1 2851.0 3773.3 3442.2 3230.8 3664.4 3474.0 3546.4 3185.4 True False 3363.158616352955 2895.335552418664 3697.05892529855 3027.099794909212 3508.276425178327 3414.1678644577705 3353.7498619615963 3591.310667333811 3327.999861160422 3322.4796987675895 2793.6159939143 1.2038729101205623 1.0364114318954192 1.3233955322966142 1.083577628959578 1.2558191364958053 1.2221321297899568 1.2005049617655073 1.285541991153127 1.191287517114106 1.1893115252795599 1.0 11.447918008433799 -10.443905518879 0.8298021218584347 1.0022302140793748 1.1994060137115479 0.035635964930038844 0.09490222786101767 0.3935566881476162 0.4978268221347265 0.045637510910240535 0.014073303335720835 3.598276074326728e-11 10.443905518879 0.19717579963217302 VKPPPQIS(ph)PSK ddPTM_A549_MK2206_60min_R1 2 VKPPPQISPSK 11 1 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 VKPPPQIS(0.991)PS(0.009)K;VKPPPQIS(0.995)PS(0.005)K 124.62 1.276e-06 48000000.0 8572.8 9186.3 9752.099999999999 8416.5 11867.900000000001 8519.4 9519.9 8946.1 14443.599999999999 13955.3 14294.1 True False 10019.679055163071 9653.843432140271 11135.094421228696 10478.542877831042 10122.147631312064 9420.91725327997 11249.542602418436 10214.237071282216 11172.147661689669 10802.788037623224 10744.48047290943 0.9325419763595052 0.8984932734980501 1.0363548474311195 0.9752489107547908 0.9420788335772508 0.8768145911785475 1.0470066589801565 0.9506496937693598 1.0398034311531894 1.0054267458404162 1.0 13.391308105472186 -7.783646974732143 24.999999827834376 1.0150018292302134 0.9471260211088857 0.33409983457349823 0.04512313759781786 201.97544126970786 227371.2324575685 0.007090621208605491 0.00980127302982727 1.6457089282540226e-08 7.783646974732143 -0.06787580812132776 VKPPPQIS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 VKPPPQISPSK 11 1 K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;Q9H6U6-8;Q9H6U6-3;Q9H6U6-7 K7ESE9;Q9H6U6-8 BCAS3 Breast carcinoma-amplified sequence 3 1 VKPPPQIS(0.994)PS(0.006)K;VKPPPQIS(0.999)PS(0.001)K 115.91 5.6195e-06 79416000.0 16349.1 14869.8 17021.3 18675.1 22319.5 24590.0 17725.4 20109.5 24812.7 18498.7 18591.3 True False 18008.848596428707 16122.930231567638 18176.467775391873 19828.618512770623 20751.855318094935 24389.747192788524 18399.94979671107 19708.40024690244 23769.908507488562 17330.6889249921 16304.687959960738 1.1045196719282735 0.9888524252141813 1.1148001004390666 1.2161298984355644 1.2727539078978427 1.495873288264221 1.1285067118055645 1.2087566652793458 1.457857308637865 1.0629267464394843 1.0 13.992999210520836 -6.156755642835803 2.9426998334857473 1.2383034312602526 1.0470499064851664 0.20832889970154211 0.1425891737084017 0.38232670275652436 6.336209398447866 0.025489891477446004 0.07759136444938101 6.970185835120145e-07 6.156755642835803 -0.19125352477508617 VKPPPS(ph)PTTEGPSLQPDLAPEEAAGTQRPK ddPTM_A549_MK2206_60min_R1 2 VKPPPSPTTEGPSLQPDLAPEEAAGTQRPK 30 2 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.721)PT(0.278)T(0.001)EGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.979)PT(0.021)TEGPSLQPDLAPEEAAGTQRPK 214.25 8.348299999999998e-91 245010000.0 4389.1 6022.2 5372.2 5026.7 7328.7 5699.6 5353.1 5495.2 8094.900000000001 8393.2 8155.3 True False 5129.872776807601 6328.704257104069 6134.0587411659835 6258.241725657137 6250.657938270185 6302.727888911719 6325.688978351258 6274.161428344196 6261.4180748990375 6497.170290669443 6130.113935170332 0.8368315550182449 1.032395861485439 1.000643512671603 1.0209013717920798 1.019664235342879 1.0281583597901904 1.0319039817610651 1.023498338643825 1.021419526801186 1.0598775747695643 1.0 12.581698172962756 -5.258109636512144 24.998996642932607 1.015340911340068 0.8368314885049078 0.9035312520384349 0.01736629334487424 51.661521124393886 387845.502933029 0.0017756416212559739 0.01766235684559975 5.519380863578166e-06 5.258109636512144 -0.17850942283516014 VKPPPS(ph)PTTEGPSLQPDLAPEEAAGTQRPK ddPTM_A549_PD325901_60min_R1 4 VKPPPSPTTEGPSLQPDLAPEEAAGTQRPK 30 2 Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4 Q9Y2D5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.49)PT(0.49)T(0.021)EGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.654)PT(0.17)T(0.17)EGPS(0.005)LQPDLAPEEAAGTQRPK;VKPPPS(0.957)PT(0.043)TEGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.928)PT(0.036)T(0.036)EGPS(0.001)LQPDLAPEEAAGTQRPK 244.49 1.7401999999999994e-121 371403200.0 7579.4400000000005 8720.27 8540.43 8582.109999999999 10972.53 8976.900000000001 9939.69 10264.57 9434.59 10057.39 11636.800000000001 True False 8348.899169111177 9455.157756690223 9120.034937577622 9112.207443314037 10201.857345973529 8903.795102681712 10317.950342157072 10059.835098950607 9038.086991970504 9422.364678995087 10205.547371752982 0.8180746083467649 0.9264723794100751 0.8936350599694581 0.892868075703112 0.9996384294104923 0.8724465997116163 1.0110139090349235 0.9857222481563626 0.885605314712096 0.9232591193564398 1.0 13.317065942550729 -3.1078997956899403 0.463592778829892 0.9517820415685097 4.602724076577135e-12 0.36288088783217476 0.04810077954385027 26.763260407877755 0.771114279233658 0.01054490001633694 21.508669354761032 0.0007800100606653592 3.1078997956899403 -0.9517820415639069 VKPVGAAGGSSTPS(ph)PRPSTR ddPTM_A549_PD325901_60min_R1 1 VKPVGAAGGSSTPSPRPSTR 20 2 A4D1S0-2;A4D1S0 A4D1S0-2 KLRG2 Killer cell lectin-like receptor subfamily G member 2 1 VKPVGAAGGS(0.01)S(0.038)T(0.038)PS(0.822)PRPS(0.046)T(0.046)R 42.806000000000004 0.013432 5408500.0 1795.6 2319.0 2317.3 2337.2 2733.9 2425.6 2377.7 2553.0 2628.5 2314.4 2924.5 True False 1977.8879901491443 2514.430268531209 2474.565913056909 2481.5635358336776 2541.880295442986 2405.846717805116 2468.1846746273645 2502.0784122102455 2518.0332858549723 2168.268389022024 2564.8050399329372 0.7711650434844984 0.9803592200508756 0.9648163796190965 0.9675447050347982 0.9910617984084472 0.9380232338704475 0.9623283782582948 0.9755433154777597 0.9817640119425265 0.845393063122926 1.0 11.324633450216933 -5.261355847838927 8.507561253678624 0.9814473078077592 0.7699076675368794 0.5663234654562668 0.04441890774852091 0.018560320354126754 20.798177408319585 0.0027411634561867616 0.022315553749221707 5.478279072601719e-06 5.261355847838927 -0.2115396402708798 VKPYVNGT(ph)SPVYSR ddPTM_A549_PD325901_60min_R1 1 VKPYVNGTSPVYSR 14 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 VKPYVNGT(0.5)S(0.5)PVYSR 130.95 3.6458e-09 58339000.0 8141.2 7664.0 8963.0 9488.4 11239.0 11561.0 8323.9 10399.0 12003.0 10127.0 11874.0 True False 8967.688630765319 8309.872176810337 9571.283078897459 10074.47691828011 10449.611412445134 11466.851049037334 8640.670569512851 10191.58378714232 11498.55565155687 9487.579491715369 10413.57327548766 0.8611538415804125 0.7979847029425345 0.9191161214015889 0.9674370796424179 1.003460688853297 1.1011447027533734 0.8297507820732374 0.9786826786087078 1.1041892487205263 0.9110781900433761 1.0 13.346177574244942 -6.204536997121251 1.3154463555248779 1.030299293823782 0.8215623070274528 0.2792420394570966 0.08134318251785416 0.3210868837295798 0.9890194223750172 0.011891205416020975 0.05556018247079197 6.244001559774501e-07 6.204536997121251 -0.20873698679632924 VKPYVNGTS(ph)PVYSR ddPTM_A549_MK2206_60min_R1 2 VKPYVNGTSPVYSR 14 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 VKPYVNGT(0.484)S(0.516)PVYSR;VKPYVNGT(0.124)S(0.874)PVYS(0.002)R 119.76 6.988899999999999e-07 64611000.0 7878.3 9609.7 10437.4 9904.5 14366.8 10865.400000000001 12415.2 12649.1 17274.9 16179.0 16249.5 True False 9207.964434057862 10098.792683652644 11917.580266007575 12331.102944629905 12253.462751584886 12015.169416131199 14670.881135048197 14442.1486612441 13362.162732346702 12524.152663196499 12214.300686614879 0.7538675091033635 0.8268007266858488 0.9757071298455533 1.009562746244083 1.0032062470029843 0.9836968750325674 1.2011232989478782 1.1823966866208413 1.0939768943947576 1.0253679669865319 1.0 13.576283645951698 -5.539465997529664 0.8680045600894799 1.0632618808690968 0.639671589239537 0.7195534662002904 0.06669035428424644 0.7356624140597425 0.5273875494127993 0.011879300981922674 0.26854055216867406 2.8875798493066024e-06 5.539465997529664 -0.42359029162955975 VKPYVNGTS(ph)PVYSR ddPTM_A549_PD325901_60min_R1 1 VKPYVNGTSPVYSR 14 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 VKPYVNGT(0.044)S(0.956)PVYSR 147.49 9.2436e-14 49660000.0 8818.5 7760.8 8057.0 9253.7 10518.0 11251.0 9827.4 9807.4 13373.0 9429.1 8948.5 True False 9713.747628163414 8414.829852529969 8603.796470676873 9825.280032322484 9779.25196513016 11159.375586257162 10201.387084759624 9611.783713243536 12810.979315860211 8833.74501681973 7847.891229215212 1.2377525814835724 1.0722408869791957 1.096319535959885 1.2519643488108092 1.2460993252206536 1.421958493093577 1.2998889493757373 1.224760057512254 1.6324104070363508 1.1256202155216546 1.0 12.9380893307861 -6.503380015935246 2.473428172619591 1.3062707584463589 1.129987537979179 0.1199330391607264 0.15760848629517527 0.5445165014970531 6.604157266616423 0.03268360550034307 0.08262457308996574 3.1377618909404166e-07 6.503380015935246 -0.1762832204671798 VKQDS(ph)ESPKSTSPSAAGGQQK ddPTM_A549_MK2206_60min_R1 1 VKQDSESPKSTSPSAAGGQQK 21 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 VKQDS(0.49)ES(0.49)PKS(0.007)T(0.007)S(0.007)PSAAGGQQK 111.65 4.2151e-11 12005000.0 989.8 1048.3 925.23 940.63 963.61 1022.8 1014.6 1011.9 1341.2 1213.4 1476.7 True False 1156.8540417133736 1101.6539923486753 1056.4415265792425 1171.0843922264855 821.8642454864483 1131.0320171203075 1198.9396868048757 1155.3399238137818 1037.4203414562978 939.2920972571006 1109.9946351533397 1.0422158856232315 0.9924858710659334 0.9517537230558785 1.0550360831831467 0.7404218177801484 1.0189526879686779 1.0801310644526212 1.0408518088505696 0.9346174374194015 0.846213186541521 1.0 10.116336988393886 -5.324870557785975 3.1277972257214404 0.9735992864061817 1.0481104047232221 0.0487494337892328 0.09433844064968643 0.7801495091818911 12.002178039036313 0.011401574945077625 0.12973755121168548 4.732923035226887e-06 5.324870557785975 0.07451111831704049 VKQDSES(ph)PKS(ph)TSPSAAGGQQK ddPTM_A549_MK2206_60min_R1 1 VKQDSESPKSTSPSAAGGQQK 21 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 2 VKQDS(0.121)ES(0.873)PKS(0.375)T(0.334)S(0.298)PSAAGGQQK 78.717 6.1418e-05 15537000.0 1306.1 1314.6 1410.0 1020.8 1489.0 990.79 1408.4 1149.3 1281.7 1565.5 1538.9 True False 1526.5377489208295 1381.5075248894107 1609.959202011101 1270.8960458254537 1269.9700724663733 1095.634740166826 1664.2880493751109 1312.216794583634 991.3969964543223 1211.8524627130307 1156.748658520671 1.3196797227092272 1.1943022494239819 1.3917969043249436 1.0986795069646005 1.0978790103724845 0.9471675044499283 1.4387637600578815 1.1344009650824116 0.8570548054252238 1.0476367997373175 1.0 10.175859710475434 -8.63124722323456 5.530207262779248 0.9331420476396252 1.2053502298920569 0.3583740386194242 0.14015519368801663 0.14151536076869112 6.452119499612119 0.023521571529663946 0.026667686593978418 2.3375062285097664e-09 8.63124722323456 0.2722081822524317 VKQDSES(ph)PKS(ph)TSPSAAGGQQK ddPTM_A549_PD325901_60min_R1 2 VKQDSESPKSTSPSAAGGQQK 21 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 2 VKQDS(0.015)ES(0.985)PKS(0.583)T(0.058)S(0.349)PS(0.01)AAGGQQK;VKQDS(0.126)ES(0.865)PKS(0.781)T(0.13)S(0.095)PS(0.003)AAGGQQK 167.72 1.9567e-35 70941000.0 5824.0 5879.0 6781.299999999999 6364.2 7075.799999999999 6172.5 6986.0 7207.9 6686.799999999999 5637.4 7173.200000000001 True False 6415.2481925978045 6374.443962352293 7241.519797269592 6757.302179853105 6578.820218184823 6122.233206485851 7251.85605288588 7064.1327800118415 6405.777049973383 5281.453601915295 6290.941874661291 1.019759571843637 1.0132733840742247 1.1511026395645216 1.074132032131822 1.0457607698909206 0.9731822878772786 1.1527456774151685 1.1229054282737558 1.0182540512374827 0.8395330472195234 1.0 12.619060317056931 -8.952707185723897 14.699631258004732 1.0080500969261839 1.0690661814912992 0.25336930577358274 0.07410079861232238 2.4769676967917147 769.0677798856424 0.009475702800997356 0.010065904359880733 1.1150460774861292e-09 8.952707185723897 0.061016084565115314 VKQDSES(ph)PKSTS(ph)PSAAGGQQK ddPTM_A549_MK2206_60min_R1 1 VKQDSESPKSTSPSAAGGQQK 21 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 2 VKQDS(0.113)ES(0.887)PKS(0.176)T(0.155)S(0.658)PS(0.012)AAGGQQK 93.397 5.9108e-07 17035000.0 1006.2 940.1 1469.2 953.48 1460.2 1045.4 1355.2 989.88 1938.1 1857.7 1774.8 True False 1176.0219607718698 987.9470745082416 1677.5546521948309 1187.0826428033442 1245.4065143152438 1156.023534119642 1601.4222980070656 1130.1985213803598 1499.1234445097311 1438.0442797713176 1334.0681780118834 0.8815306295098466 0.7405521627691815 1.2574729536648073 0.8898215716174366 0.9335403803508985 0.8665400713196116 1.2004051400083697 0.8471819806575825 1.123723261837955 1.077939121458085 1.0 10.381616682493608 -7.730519733017522 24.999954561049815 1.050385608231671 0.9331709418865016 0.1522607787076138 0.1426162958793981 307.27926555630063 248448.83383852572 0.020951227533496427 0.031073926958839603 1.859860054930673e-08 7.730519733017522 -0.1172146663451693 VKQDSES(ph)PKSTS(ph)PSAAGGQQK ddPTM_A549_PD325901_60min_R1 2 VKQDSESPKSTSPSAAGGQQK 21 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 2 VKQDS(0.135)ES(0.865)PKS(0.036)T(0.232)S(0.716)PS(0.016)AAGGQQK;VKQDS(0.051)ES(0.948)PKS(0.054)T(0.169)S(0.736)PS(0.042)AAGGQQK 110.68 2.5113999999999997e-10 11891500.0 2491.1 2717.3 3512.8 2402.6000000000004 3216.4 3097.3 2515.6000000000004 3416.6 3326.8 2858.2 3435.5 True False 2743.9946381491063 2946.296407365181 3751.1997321824188 2551.0031452994995 2990.491159977622 3072.076615706543 2611.3325345891394 3348.453232729151 3186.9861652586346 2677.732764216535 3012.9552794288247 0.9107319504155713 0.9778759172036963 1.2450233688478594 0.8466780647946096 0.9925441576897678 1.0196223743118173 0.8667013919583226 1.111351786596689 1.057760859252714 0.8887396313177809 1.0 11.556963544177579 -8.314446391381164 24.99743812076578 1.0343437352879847 0.9868944238067234 0.008124321619211061 0.11142928155070009 874.5505289758543 412424.7228200538 0.01626479952971196 0.01966319579025373 4.847899506301716e-09 8.314446391381164 -0.0474493114812613 VKQDSES(ph)PKSTSPSAAGGQQK ddPTM_A549_MK2206_60min_R1 1 VKQDSESPKSTSPSAAGGQQK 21 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 VKQDS(0.124)ES(0.487)PKS(0.091)T(0.125)S(0.173)PSAAGGQQK 140.21 1.2878e-19 12895000.0 1309.1 1901.6 1341.1 1319.4 1714.9 1338.3 1845.8 1262.4 2082.2 2349.8 2288.7 True False 1530.0440755778714 1998.383317609693 1531.2881459695654 1642.6530592301162 1462.6404817142936 1479.9180177083567 2181.1579675778053 1441.3490659378579 1610.5850245901452 1818.978547993025 1720.3526250934158 0.8893781735560111 1.1616126185183575 0.890101322039379 0.9548350932652075 0.8501980700816333 0.8602410901823088 1.2678551686224024 0.8378218772791375 0.9361947086299762 1.0573288995878118 1.0 10.748488592805801 VKQDSES(ph)PKSTSPSAAGGQQK ddPTM_A549_PD325901_60min_R1 2 VKQDSESPKSTSPSAAGGQQK 21 2 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 VKQDS(0.21)ES(0.782)PKS(0.004)T(0.001)S(0.003)PSAAGGQQK;VKQDS(0.138)ES(0.857)PKS(0.004)T(0.001)SPSAAGGQQK 137.24 1.2298e-18 39689000.0 3056.7 2732.1 3390.8 3681.2 3426.5 3298.7 3564.1000000000004 3631.7 3801.0 3545.0 3142.3999999999996 True False 3367.013933776391 2962.3436553057854 3620.9200785368207 3908.5793633882126 3185.834460783274 3271.8364808805 3699.7337758503536 3559.262894486466 3641.257188333555 3321.1680950065142 2755.904721314843 1.2217454064123043 1.0749078632487885 1.3138770910807391 1.4182563472380962 1.156003121640327 1.1872095778839211 1.3424752123089398 1.291504335022272 1.3212565587522598 1.205109911572699 1.0 11.428310295903605 -10.806911016157532 1.0138861927659635 0.9974954852865889 1.2610753655369702 0.1516649828969443 0.10833587777570981 0.35911296602421056 0.6452750637617072 0.06870607876411816 0.016474978605161936 1.5598720767519934e-11 10.806911016157532 0.26357988025038126 VKQNS(ph)ESER ddPTM_A549_PD325901_60min_R1 3 VKQNSESER 9 1 Q9BVA0 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 1 VKQNS(0.773)ES(0.227)ER;VKQNS(1)ESER;VKQNS(0.997)ES(0.003)ER 82.54299999999999 0.00041957 40181300.0 11531.529999999999 12629.32 10625.21 9346.24 12306.41 11204.529999999999 9145.58 9637.41 10429.970000000001 14249.78 16200.55 True False 12702.202436536296 13693.637119002386 11346.30064517818 9923.536017948894 11442.050216409714 11113.284022530077 9493.620051553407 9445.184297148107 9991.63463209769 13350.046458917339 14207.985053747823 0.8940185669174583 0.9637986714653981 0.7985861895445351 0.6984478080747443 0.8053253274919161 0.7821857906303599 0.6681890511314378 0.6647799995155984 0.7032407899008922 0.9396157448375008 1.0 13.794414348691376 -10.842755436325277 1.1212943015997372 0.9983766410689416 0.7697889341764812 0.4047041426129574 0.08996998784198562 0.3790380609316216 0.8554569935625282 0.06622151676669415 0.016706282952470397 1.4362980262610649e-11 10.842755436325277 -0.22858770689246044 VKS(ph)LKK ddPTM_A549_PD325901_60min_R1 1 VKSLKK 6 2 B9ZVN9;O95602;J3QRV5;Q6P1M3;Q6P1M3-2;A0A087WW77;Q15334 B9ZVN9;J3QRV5;A0A087WW77 POLR1A;LLGL2;LLGL1 DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1;Lethal(2) giant larvae protein homolog 2;Lethal(2) giant larvae protein homolog 1 1 VKS(1)LKK 60.973 0.038536 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VKS(ph)PGGPGSHVR ddPTM_A549_MK2206_60min_R1 4 VKSPGGPGSHVR 12 1 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 VKS(0.999)PGGPGS(0.001)HVR;VKS(0.977)PGGPGS(0.023)HVR;VKS(0.995)PGGPGS(0.005)HVR;VKS(0.996)PGGPGS(0.004)HVR 94.461 0.00011035 96827000.0 7900.129999999999 8928.9 7126.32 6710.91 10369.1 7857.139999999999 7880.45 8570.71 10976.6 13671.599999999999 14172.3 True False 9233.478804365599 9383.342871584553 8136.939333670751 8355.083251264201 8843.819125863713 8688.577339652576 9312.225758802962 9785.63438919855 8490.417626028337 10583.176064661431 10652.926774418413 0.8667551180900418 0.8808229954342128 0.7638219529688807 0.7842993224479702 0.8301774069358074 0.8156047181810204 0.8741471668767155 0.9185864689033112 0.7970032842445651 0.9934524369467668 1.0 13.378962229047628 -10.920286630197264 0.7953662253729435 1.0187737502362748 0.8331697509550025 0.6631949005175448 0.0439029446800943 0.4348222720132787 0.40203826202583126 0.05441204777551662 0.008620903433476188 1.2014712133969494e-11 10.920286630197264 -0.18560399928127236 VKS(ph)PGGPGSHVR ddPTM_A549_PD325901_60min_R1 7 VKSPGGPGSHVR 12 1 O75382-3;O75382-2;O75382;A0A1W2PPI7;O75382-4 O75382-3 TRIM3 Tripartite motif-containing protein 3 1 VKS(0.996)PGGPGS(0.004)HVR;VKS(0.951)PGGPGS(0.049)HVR;VKS(0.996)PGGPGS(0.004)HVR;VKS(1)PGGPGSHVR;VKS(0.993)PGGPGS(0.007)HVR;VKS(0.994)PGGPGS(0.006)HVR;VKS(0.895)PGGPGS(0.105)HVR 117.0 9.6307e-06 138452000.0 15527.8 17332.6 16957.32 17577.5 19747.8 17842.53 17412.3 18564.600000000002 18965.7 20422.8 20448.4 True False 17104.17082503781 18793.279030764996 18108.14570784887 18663.22225360108 18360.782654211584 17697.22635135197 18074.934604876165 18194.31448935303 18168.637583998345 19133.30092262315 17933.376433087593 0.95376188019341 1.047949843738899 1.0097454751710238 1.0406976245235617 1.0238330033788514 0.9868318114763976 1.0078935593816787 1.0145504142646555 1.0131186200093747 1.06691012671332 1.0 14.130359518881216 VKS(ph)PLK ddPTM_A549_PD325901_60min_R1 2 VKSPLK 6 1 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 VKS(1)PLK;VKS(1)PLK 46.891000000000005 0.030323000000000003 192798000.0 19766.199999999997 19247.5 18586.199999999997 18641.5 22860.0 18117.0 18629.9 19682.9 20742.0 21523.0 22560.0 True False 21772.850072892626 20869.554374107116 19847.571299900024 19792.943117081762 21254.392462718723 17969.461158672195 19338.87103917244 19290.309118563662 19870.285872247998 20164.034106861833 19785.263019622846 1.1004579545542816 1.0548029790359057 1.0031492267863906 1.0003881726238009 1.0742537231695535 0.9082245275612584 0.9774381578851049 0.9749837088054735 1.00429728189819 1.0191441016914118 1.0 14.27213862376243 -5.032740360500754 0.9213281709624417 0.9952947040855966 1.202596516029464 0.4425441917659051 0.03720500004244049 2.0168401397677904 0.9702236758558915 0.005342663764235694 0.4608930782775721 9.27384086876671e-06 5.032740360500754 0.20730181194386743 VKS(ph)PQRPSDWSK ddPTM_A549_MK2206_60min_R1 3 VKSPQRPSDWSK 12 2 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VKS(0.987)PQRPS(0.012)DWSK;VKS(0.726)PQRPS(0.273)DWS(0.001)K;VKS(0.983)PQRPS(0.017)DWSK 82.259 0.00013655 394034000.0 10830.5 10588.8 8252.1 8136.1 14740.6 12734.900000000001 9180.0 11077.6 15272.4 15145.900000000001 14415.1 True False 12658.423619697596 11127.724691578424 9422.371865897745 10129.444865243413 12572.277266754742 14082.498665257546 10847.8871721553 12647.883723727196 11813.2257850113 11724.430670715605 10835.43283347931 1.1682434669878263 1.0269755590377516 0.8695888766699296 0.9348445069905712 1.1602930367404365 1.2996710774437599 1.001149408507015 1.167270742027746 1.0902403223349608 1.0820454384147415 1.0 13.403469164198558 -5.25236512905073 22.72984669324769 1.0536956738393433 1.1682436756454664 0.06066572735492426 0.11333162539084853 735.1513037804319 1841309.3753023013 0.015878067484449844 0.24884797786588206 5.592871882677163e-06 5.25236512905073 0.11454800180612312 VKS(ph)PQRPSDWSK ddPTM_A549_PD325901_60min_R1 4 VKSPQRPSDWSK 12 2 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VKS(0.991)PQRPS(0.007)DWS(0.002)K;VKS(0.997)PQRPS(0.003)DWSK;VKS(0.95)PQRPS(0.049)DWS(0.001)K;VKS(0.999)PQRPS(0.001)DWSK 114.96 8.9986e-06 586443000.0 27924.5 22363.199999999997 20550.999999999996 22794.0 20917.000000000004 23204.5 18715.7 18945.7 28017.000000000004 25721.799999999996 31775.4 True False 30759.374683069604 24247.82534765724 21945.71444320225 24201.93361107002 19447.862079732608 23015.530245427442 19427.93620512402 18567.813150885882 26839.542921741984 24097.721158290147 27867.227240856548 1.1037831075627371 0.8701197696521148 0.787509796131684 0.8684729701269746 0.6978757488732074 0.8258995430906753 0.6971607199097455 0.6662956809590063 0.963122117954819 0.8647333640341558 1.0 14.766281842526897 -8.91546492726966 10.18718572569156 0.9837690137429448 0.8099592107519098 0.16667313754958557 0.11851244584653912 0.3094766533748572 35.00121195862383 0.019633564757533112 0.020877149284308685 1.2148847281050144e-09 8.91546492726966 -0.173809802991035 VKS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 VKSPSK 6 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5;A0A3B3ISF7;A0A3B3ISJ7;A0A3B3IRN6;A0A3B3ITZ5;N0DVX5;Q9HCK1 Q5T4S7-3 UBR4;ZDBF2 E3 ubiquitin-protein ligase UBR4;DBF4-type zinc finger-containing protein 2 1 VKS(0.873)PS(0.127)K 60.973 0.017603999999999998 24494000.0 11356.0 9338.8 8207.1 5638.1 9155.5 9334.7 10114.0 10799.0 9683.5 13687.0 13922.0 True False 13272.615172456111 9814.105030760105 9370.990189237807 7019.43475310393 7808.7380782175105 10322.491758127624 11951.582882263468 12329.791320550474 7490.2027113719505 10595.097193965657 10464.783172346988 1.2683124871166727 0.9378221095582479 0.8954786769018291 0.6707673381759756 0.746192056692772 0.9864028320629359 1.142076494603856 1.1782175624175126 0.715753263876951 1.0124526251019728 1.0 13.35325479917743 -8.790966040612208 24.99998814204096 0.8657724507491408 0.9618185783035677 0.00658850602340022 0.1839181678571965 563.4952539057008 477104.427554632 0.03528338693127368 0.03756458601772207 1.618206567355449e-09 8.790966040612208 0.09604612755442687 VKS(ph)PSKQAPGEK ddPTM_A549_MK2206_60min_R1 2 VKSPSKQAPGEK 12 2 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 VKS(0.975)PS(0.025)KQAPGEK;VKS(0.838)PS(0.162)KQAPGEK 67.605 0.00095774 38029800.0 3301.74 4670.6 5717.3 4043.0 6021.5 4016.8999999999996 3956.2 2830.07 7598.4 7232.5 7860.8 True False 3858.9929922072265 4908.313590254436 6528.099110395792 5033.535181497165 5135.745326632813 4441.96569179758 4674.990330117733 3231.2410892258827 5877.374532151456 5598.673226810599 5908.746412956843 0.6530984277384341 0.8306861129615186 1.104819644329433 0.8518786946854761 0.8691768046384636 0.7517610980997812 0.7911983360575942 0.5468572965223788 0.9946906029447136 0.9475230168168483 1.0 12.5286363684244 -8.929236982119694 24.9999944705948 0.9976664030730629 0.8106088815660603 0.2651034150038367 0.13240110151703524 42.56777284902504 15038.22316857776 0.02316033363053629 0.024655976080865408 1.1769635627959563e-09 8.929236982119694 -0.1870575215070026 VKS(ph)PSKQAPGEK ddPTM_A549_PD325901_60min_R1 4 VKSPSKQAPGEK 12 2 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 VKS(0.5)PS(0.5)KQAPGEK;VKS(0.972)PS(0.028)KQAPGEK;VKS(0.975)PS(0.025)KQAPGEK;VKS(0.5)PS(0.5)KQAPGEK 69.331 0.00075737 112835500.0 6121.0 6276.12 8146.400000000001 8122.400000000001 7073.389999999999 13269.3 11202.8 11883.6 9542.8 9379.5 9109.7 True False 6742.399413957964 6805.030658445052 8699.26369228275 8624.102200691192 6576.579488270775 13161.239220222391 11629.128684407384 11646.57227549615 9141.749301980917 8787.276769284517 7989.264651146203 0.8439324153557294 0.8517718407874683 1.0888691352882753 1.0794613243227473 0.8231770726642842 1.6473655329885932 1.455594374726212 1.4577777535289485 1.1442541586939883 1.0998855530494693 1.0 12.963847005216314 -5.8560384436510775 1.1222066458618176 1.1567076717003475 0.7926553669504258 0.2547515513901035 0.22637704105688414 1.0606505357986096 1.9120232564093418 0.038087171027313516 0.353318829740394 1.3930334864725925e-06 5.8560384436510775 -0.3640523047499217 VKS(ph)PVEK ddPTM_A549_MK2206_60min_R1 2 VKSPVEK 7 1 Q96B01-2;Q96B01;H0YGT5;Q96B01-3 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 VKS(1)PVEK;VKS(1)PVEK 70.028 0.0076182 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VKS(ph)PVEK ddPTM_A549_PD325901_60min_R1 2 VKSPVEK 7 1 Q96B01-2;Q96B01;H0YGT5;Q96B01-3 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 VKS(1)PVEK;VKS(1)PVEK 42.06100000000001 0.028266000000000003 119420000.0 30243.0 30662.0 29302.0 28106.0 30946.0 25176.0 23318.2 26208.0 27509.0 34048.0 34311.0 True False 33313.24709628011 33245.99434829834 31290.609927240155 29842.043786642706 28772.459717904327 24970.9750030762 24205.586861208638 25685.260880221733 26352.892395124367 31898.203469331955 30090.96451534929 1.1070847223686415 1.1048497409027778 1.0398672967521174 0.9917277251588393 0.9561827007315635 0.8298496045329022 0.8044137916835952 0.8535871579363891 0.8757742671120381 1.0600591899625151 1.0 14.877042730129304 -6.319814508600764 1.4848380438371251 0.9148254807372818 1.1063252690123904 0.5453567525242322 0.07066733109092303 0.267381893526675 1.101689643515522 0.011074192514360162 0.04134232000049272 4.788345635552216e-07 6.319814508600764 0.1914997882751086 VKS(ph)TRPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLK ddPTM_A549_MK2206_60min_R1 1 VKSTRPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLK 39 2 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 VKS(0.559)T(0.147)RPGS(0.147)S(0.147)DINVAPGEQGPDQEETNTLVANTSNSNGLK 95.74700000000001 4.0365e-10 5111900.0 321.34 725.74 279.4 279.53 523.04 360.85 192.94 318.93 550.06 557.2 599.26 True False 375.57433599128626 762.6770661138299 319.0231213063132 348.0148625485784 446.1015088668984 399.0349074871558 227.99470054418776 364.1393041821617 425.4722882653232 431.32813300779316 450.4472032653823 0.8337810364204116 1.6931552923073572 0.7082364348000176 0.7725985643284022 0.9903524888888618 0.8858638805934892 0.506151883930921 0.8083950828031403 0.9445552890127612 0.9575553580553033 1.0 8.815214208020116 -5.788670480092337 24.99986805620747 0.8996692116597619 1.2634695728672456 0.29989265466361903 0.23531198642117745 176.50810321314088 162045.5830269225 0.030815573294187954 0.0958432032558168 1.6267826050427726e-06 5.788670480092337 0.3638003612074837 VKS(ph)TRPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLK ddPTM_A549_PD325901_60min_R1 1 VKSTRPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLK 39 2 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 VKS(0.77)T(0.171)RPGS(0.03)S(0.03)DINVAPGEQGPDQEETNTLVANTSNSNGLK 148.77 1.3186e-40 14202000.0 606.69 320.58 421.93 606.93 929.2 716.52 754.01 508.38 641.88 670.73 705.14 True False 668.2807221784275 347.5964016756079 450.5647070712044 644.4186876619603 863.9361975659772 710.6848986814487 782.7042631601034 498.23996208360535 614.9040157978277 628.3799933325022 618.4122502507477 1.0806395279321515 0.5620787776029146 0.7285830882045333 1.0420535611975148 1.397023097805189 1.149208959546463 1.2656674618634096 0.8056760872404839 0.9943270294993388 1.0161182820646144 1.0 9.272425087952353 -6.2670458182076105 23.38227053305798 1.0445419687096513 0.7675982877169935 0.3093056339427789 0.187865142010618 173.43674815296504 723342.8359858387 0.02646366061149773 0.06323211997515475 5.406972761997561e-07 6.2670458182076105 -0.27694368099265787 VKSGT(ph)PPR ddPTM_A549_MK2206_60min_R1 1 VKSGTPPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKS(0.011)GT(0.989)PPR 78.342 0.0017023 58581000.0 3937.5 4278.9 3406.0 2966.2 4773.9 4031.5 3749.9 3047.8 5495.2 6442.3 6180.1 True False 4602.053737367553 4496.677733340404 3889.0220156381656 3692.9191331577763 4071.6656339470887 4458.110654106885 4431.208290508188 3479.8349834960427 4250.545974031201 4986.979955628336 4645.41060791708 0.9906667301969746 0.9679828357210893 0.83717508394418 0.794960756938043 0.8764920859757437 0.9596806462078975 0.9538894759822025 0.7490909366688555 0.9149989813143925 1.0735283436794858 1.0 12.181590406743561 -10.052749077140064 0.9839559255437503 0.9906451697356107 0.8921224111774121 0.30444850459444417 0.07693702181802979 0.5505178871091475 1.0726749431605451 0.02857431734035837 0.014402302608489858 8.856271519343483e-11 10.052749077140064 -0.09852275855819859 VKSGT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 VKSGTPPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKS(0.014)GT(0.986)PPR;VKS(0.093)GT(0.907)PPR 75.819 0.0018882000000000003 117576000.0 8166.4 8570.9 8235.3 8429.0 9257.4 8092.6 8285.900000000001 8406.3 7569.9 9764.1 10232.1 True False 8995.446916214067 9293.199822576169 8794.196980881874 8949.640186352073 8607.192160296243 8026.696548692979 8601.22445871846 8238.62975188523 7251.763428036351 9147.593059648265 8973.616566626019 1.0024327259166876 1.0356136518177876 0.9800058778518097 0.9973281251660433 0.9591664738949787 0.8944773257356737 0.9585014464187682 0.9180946935626495 0.8081204912416862 1.0193875559235823 1.0 13.131473825123265 -6.899336830666648 1.3570656662118574 0.9101888182121841 1.0115735434963897 0.19950514011338738 0.056291018670038974 0.4308415564348407 1.5802001140264494 0.0109217034699097 0.026986162484171558 1.260849264199625e-07 6.899336830666648 0.10138472528420561 VKSPQRPS(ph)DWSK ddPTM_A549_MK2206_60min_R1 1 VKSPQRPSDWSK 12 2 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VKS(0.494)PQRPS(0.502)DWS(0.003)K 105.46 5.3278999999999996e-05 90778000.0 9343.4 8559.1 5889.7 5276.7 13851.0 10831.0 10315.0 11180.0 13614.0 14893.0 13147.0 True False 10920.33749580191 8994.721631128063 6724.948022755164 6569.491736880065 11813.536248308757 11977.129230964074 12189.101980477337 12764.799237314042 10530.450737090701 11528.660956362288 9882.23706125886 1.1050471090814746 0.9101908379014599 0.6805086723854101 0.6647777923314868 1.1954313760212383 1.2119856219517116 1.233435496934397 1.2916912595990673 1.065593819680062 1.1666043715504328 1.0 13.270621949130001 -6.770308802518238 24.999887764810726 1.0906813936301107 0.8337337562158328 0.4979455242312022 0.1454049498447372 157.95998021357937 445236.4489756052 0.023479977915187245 0.04484482777536491 1.6970365555748634e-07 6.770308802518238 -0.25694763741427795 VKSPS(ph)K ddPTM_A549_PD325901_60min_R1 2 VKSPSK 6 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5;A0A3B3ISF7;A0A3B3ISJ7;A0A3B3IRN6;A0A3B3ITZ5;N0DVX5;Q9HCK1 Q5T4S7-3 UBR4;ZDBF2 E3 ubiquitin-protein ligase UBR4;DBF4-type zinc finger-containing protein 2 1 VKS(0.396)PS(0.604)K;VKS(0.329)PS(0.671)K 44.11600000000001 0.036048000000000004 32291900.0 12080.6 11890.4 11011.3 11113.6 11724.1 10682.5 9215.4 10514.4 11331.400000000001 13937.7 15472.7 True False 13307.013618732326 12892.445737362423 11758.593034325957 11800.061831183102 10900.639661949273 10595.505261771586 9566.097089860375 10304.682043612764 10855.180664004954 13057.671243377234 13569.655989526535 0.9806448762594333 0.9500937788926408 0.8665358240033196 0.8695918187086498 0.8033099490777594 0.7808234247021084 0.7049623879370099 0.7593915462238855 0.7999599011488063 0.9622698801985499 1.0 13.728096526356694 -5.695630477979965 3.0729581559051553 0.8607748079575567 0.9763919897240476 0.2229296389952483 0.08408455936055649 0.4133872426029606 7.564794543529362 0.015115135123479936 0.07278472901383094 2.015438368141425e-06 5.695630477979965 0.11561718176649094 VKSPS(ph)KQAPGEK ddPTM_A549_MK2206_60min_R1 1 VKSPSKQAPGEK 12 2 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 VKS(0.422)PS(0.578)KQAPGEK 76.15100000000001 0.00024261 37916000.0 2350.9 3392.1 4181.6 2728.5 4899.0 2832.4 2883.9 2502.8 5027.4 5528.3 5891.1 True False 2747.6744460133054 3564.7434011694595 4774.613758247958 3396.9826224870217 4178.363589666059 3132.122688005046 3407.8673001937527 2857.5795645035405 3888.7019271081044 4279.453190428901 4428.1772839113155 0.6204978414022174 0.8050137048760606 1.0782345538863887 0.7671288669559632 0.9435854352189348 0.7073164616477388 0.7695869161732511 0.6453173351676428 0.8781721412186316 0.966414151027158 1.0 12.11249726683118 -9.570360102704608 1.300074157481709 0.9720066723475014 0.8046460161831666 0.24088395333696666 0.12471666629473742 0.3979842540298628 1.377518055895674 0.03196740815492368 0.024024481129130224 2.68930399675009e-10 9.570360102704608 -0.16736065616433482 VKST(ph)RPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLK ddPTM_A549_PD325901_60min_R1 1 VKSTRPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLK 39 2 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 VKS(0.221)T(0.26)RPGS(0.26)S(0.26)DINVAPGEQGPDQEETNTLVANTSNSNGLK 83.176 1.142e-06 10218000.0 362.11 378.82 610.4 601.76 530.06 429.02 474.65 674.76 540.72 570.27 493.17 True False 398.87114062870734 410.7444908689056 651.825414633383 638.9293485038825 492.8304142077287 425.5262033611275 492.7130654884462 661.3013824610199 517.9954188044513 534.2630548771127 432.5132164622073 0.9222172304729107 0.9496692245121164 1.5070647319521602 1.4772481491550251 1.1394574673090756 0.9838455500661207 1.1391861490815256 1.5289738146505956 1.197640671056149 1.2352525530830716 1.0 8.756600408149886 -10.362098841202055 1.003611105948456 1.0130281314088414 1.2095174222251883 0.0 0.2179302013366008 0.8585596300127325 1.682304830858491 0.10082760788167526 0.0398330253325589 4.344113451210556e-11 10.362098841202055 0.19648929081634692 VKSTRPGS(ph)SDINVAPGEQGPDQEETNTLVANTSNSNGLK ddPTM_A549_MK2206_60min_R1 1 VKSTRPGSSDINVAPGEQGPDQEETNTLVANTSNSNGLK 39 2 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 1 VKS(0.2)T(0.237)RPGS(0.281)S(0.281)DINVAPGEQGPDQEETNTLVANTSNSNGLK 90.20700000000001 9.0252e-10 4835200.0 412.39 538.41 423.29 370.76 677.99 546.43 277.57 449.33 658.85 823.58 472.14 True False 481.99135003250933 565.8127692649532 483.31888696402774 461.5962166440491 578.2585691279222 604.2528599091219 328.0008760757238 513.0239035154132 509.62152696725457 637.5327059988489 354.89460759890136 1.3581253130147628 1.5943121060448167 1.3618659641914603 1.3006571719053588 1.6293811084936651 1.702626207812216 0.9242205123793467 1.445566916292028 1.4359799108112237 1.7964000927266344 1.0 8.471246843493317 -11.86547753995063 0.335223664906269 0.5782385947600082 1.4532478654567516 0.0 0.31077919985690317 4.97962256528831 0.38870214116791374 1.7742498742441926 0.06813888959559075 1.3630834978495652e-12 11.86547753995063 0.8750092706967434 VKT(ph)PEMIIQKPK ddPTM_A549_MK2206_60min_R1 1 VKTPEMIIQKPK 12 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VKT(1)PEMIIQKPK 95.34700000000001 8.9591e-05 15374000.0 5084.2 5094.9 5112.6 4506.1 8103.5 6102.6 5786.7 5848.5 7937.2 8086.9 9002.7 True False 5942.288663244225 5354.2086479226045 5837.643557590042 5610.0947022865175 6911.485884641541 6748.3730814219725 6838.068485741947 6677.542785280067 6139.436873103885 6260.0636734040245 6767.081128120112 0.8781169533421844 0.7912138995457851 0.8626531065708877 0.829027256518941 1.0213392973702302 0.9972354333657387 1.010490099982229 0.9867685430180562 0.9072503723343737 0.9250759012465192 1.0 12.724317969269116 -6.749438881061186 24.99990515592366 0.9687019402510336 0.8383500115696421 0.740186339916427 0.039077299489911836 107.1890385862078 223298.94472399342 0.006527091735837554 0.013504489264277967 1.7805784748039007e-07 6.749438881061186 -0.13035192868139156 VKT(ph)PEMIIQKPK ddPTM_A549_PD325901_60min_R1 2 VKTPEMIIQKPK 12 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VKT(1)PEMIIQKPK;VKT(1)PEMIIQKPK 51.013000000000005 0.014047 26191800.0 5898.5 5353.2 5662.4 5551.3 7469.9 6731.5 6337.2 6578.299999999999 7236.0 6203.8 7375.9 True False 6497.311377753804 5804.33295105703 6046.684514777303 5894.191193082962 6945.239993756016 6676.680895821713 6578.3656138489005 6447.090645923483 6931.896083867823 5812.091009252868 6468.711059682453 1.0044213318244508 0.8972935871620092 0.9347587887275541 0.9111847999858422 1.0736667521051644 1.0321501198956735 1.0169515307075456 0.9966576936951592 1.0716039130379875 0.8984929077259144 1.0 12.659262557458478 -6.754893368166394 24.999858157387294 1.0325559251457075 0.9339305528487626 0.27965468525084347 0.05275092136328433 78.80849950282278 300974.38681493833 0.005250224314878057 0.01073296048873927 1.758355287950097e-07 6.754893368166394 -0.0986253722969449 VKT(ph)PMK ddPTM_A549_MK2206_60min_R1 1 VKTPMK 6 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VKT(1)PMK 63.486000000000004 0.023704 18041000.0 2364.3 2721.8 2344.0 2394.4 3538.7 2358.4 2783.2 2433.6 3322.9 3383.1 3431.7 True False 2763.3360384147604 2860.327994252243 2676.4144464638466 2981.028107488699 3018.161917687545 2607.9643226207795 3288.8714136756653 2778.570252587428 2570.268455580921 2618.8553603350065 2579.5141798982295 1.0712622012117736 1.1088630628753096 1.037565316492829 1.155654863508566 1.1700505239349457 1.0110292639382477 1.2749964467361146 1.0771680474720444 0.996415710993427 1.0152513914222132 1.0 11.33288366184181 -8.653741881938739 4.550287941952836 0.9983763633461656 1.1179713023635032 0.35418940894466566 0.0671385890835468 0.14991656232273384 5.3709306589917984 0.010671423718367167 0.012068773228666221 2.2195151718526683e-09 8.653741881938739 0.11959493901733753 VKT(ph)PQPK ddPTM_A549_MK2206_60min_R1 2 VKTPQPK 7 1 P16402 P16402 HIST1H1D Histone H1.3 1 VKT(1)PQPK;VKT(1)PQPK 85.53299999999999 0.0053698999999999995 309760000.0 17005.5 16588.1 15757.1 13632.3 20230.6 18547.4 16431.9 16395.2 22584.0 23937.0 24065.0 True False 19875.612655442288 17432.36343649629 17991.693717736976 16972.21411197721 17254.705539313778 20510.073557232303 19417.363532041247 18719.26980819421 17468.760059237266 18529.615075031496 18088.996339788122 1.098768128540353 0.9636998708520097 0.9946208943700695 0.9382617914873218 0.9538785466698748 1.1338425400705532 1.0734350965250228 1.034842920887753 0.9657119572086705 1.0243583848969111 1.0 14.14282474241298 -5.249118201100771 23.647315251820388 0.996710031870614 1.0987682643387058 0.15149333728939207 0.05578129691639912 1124.6743850553469 2158435.5677482295 0.007924015184300708 0.17552277480915227 5.6348427251421335e-06 5.249118201100771 0.10205823246809176 VKT(ph)PQPK ddPTM_A549_PD325901_60min_R1 2 VKTPQPK 7 1 P16402 P16402 HIST1H1D Histone H1.3 1 VKT(1)PQPK;VKT(1)PQPK 102.06 0.004264100000000001 393020000.0 21208.5 20763.8 22208.0 22280.0 23542.0 21190.9 21947.0 21938.0 23441.0 22919.0 23887.0 True False 23361.571307127506 22513.638296562425 23715.16842755269 23656.184998448698 21888.491135490982 21018.328336220497 22782.205094859215 21500.429379971927 22455.856288273328 21471.890428618997 20949.050432168944 1.1151613474209763 1.074685383447783 1.1320402566378927 1.1292246908777657 1.0448440709216802 1.0033069710856761 1.087505382099578 1.026319997156353 1.0719271673426574 1.024957694294687 1.0 14.354597231214015 -2.5008963986092114 0.010794372468619483 5.259625003905302e-08 2.2865618308530697 0.47592357914714867 0.033330992475853014 4934.3026866828795 4.330123255081104 393.72363555868543 533.456367521737 0.003155757342716877 2.5008963986092114 2.2865617782568197 VKTQS(ph)ESGDVSR ddPTM_A549_MK2206_60min_R1 1 VKTQSESGDVSR 12 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VKT(0.053)QS(0.928)ES(0.017)GDVS(0.001)R 46.891999999999996 0.010203 9862900.0 1715.5 1974.2 1908.7 1847.1 2974.6 2109.1 1882.0 2245.2 2917.4 3617.1 3910.4 True False 2005.034460051821 2074.6783475100233 2179.3823609068 2299.6395829194707 2537.040280428792 2332.2835620927262 2223.9350389974143 2563.4639756366278 2256.613558130484 2799.9945978149494 2939.3397584503405 0.6821376992188553 0.705831417258079 0.7414530268715175 0.782366031796158 0.8631327062939991 0.7934719201438413 0.756610402932767 0.8721223765530667 0.7677280422050293 0.9525930405851225 1.0 11.521276414492112 -14.999999999999998 0.18219114214048168 1.963004618320432 0.7228782869550768 0.7397051730915747 0.048810576256950906 18.711654506645267 0.20930938143860556 6.440629585828276 0.0566593176216897 1.000000000000004e-15 14.999999999999998 -1.2401263313653552 VKTQS(ph)ESGDVSR ddPTM_A549_PD325901_60min_R1 1 VKTQSESGDVSR 12 1 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VKT(0.06)QS(0.936)ES(0.004)GDVSR 54.281000000000006 0.005836 13395000.0 1724.9 2344.1 2533.9 1886.0 2358.6 2493.3 2180.7 2297.4 2523.0 2209.4 2696.6 True False 1900.010578195733 2541.645533619665 2705.865691578521 2002.493936583225 2192.9400727282746 2472.9953914509815 2263.687731824827 2251.576554724567 2416.967083968839 2069.8981069414385 2364.935295155805 0.8034091174027482 1.074720961214382 1.1441605599616438 0.8467436469340266 0.9272727576184282 1.0456926227607668 0.957188019672941 0.9520668744453874 1.0220013583118375 0.8752451329984785 1.0 11.207584996499547 -8.773065998039955 24.71449912232647 1.0103895305891337 0.9749847404206125 0.0 0.1004881368324636 619.8719276378156 1317644.680902338 0.015452452911593858 0.016520110497726927 1.6862967459714088e-09 8.773065998039955 -0.03540479016852127 VKTT(ph)PLR ddPTM_A549_MK2206_60min_R1 2 VKTTPLR 7 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 VKT(0.123)T(0.877)PLR;VKT(0.079)T(0.921)PLR 47.706 0.023296 301610000.0 7917.9 7835.900000000001 8142.700000000001 6857.6 10679.3 8026.900000000001 7727.7 8033.799999999999 9730.599999999999 10682.8 11055.7 True False 9254.247945930807 8234.713840165019 9297.45730086227 8537.712307849359 9108.389116783163 8876.301230175006 9131.723061030993 9172.615752480639 7526.634636575199 8269.548060473177 8310.264568202603 1.1135924578550902 0.9909087457544177 1.1187919740169214 1.027369494410206 1.09604081097904 1.0681129532431757 1.0988486571139406 1.1037694019487216 0.9057033713913524 0.9951004559006197 1.0 13.020678692482976 -8.755252198300424 24.999746254187013 0.9554710351066901 1.0750792101435305 0.5580426379095116 0.04333920223192844 74.3237090095655 300309.8835151931 0.007841292957747067 0.008782055315738514 1.7569030699177433e-09 8.755252198300424 0.1196081750368404 VKTT(ph)PLR ddPTM_A549_PD325901_60min_R1 1 VKTTPLR 7 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 VKT(0.276)T(0.724)PLR 68.456 0.009011 185620000.0 5173.7 5419.5 4703.6 4604.5 6310.6 4944.7 5642.0 5732.5 5384.0 5320.0 5598.8 True False 5698.930215323365 5876.220284736901 5022.814581044529 4888.909507421772 5867.365226388136 4904.4320026100595 5856.709397420863 5618.16079044075 5157.729203364341 4984.094292083122 4910.183093717396 1.160634971558428 1.1967415822549579 1.022938347751481 0.9956674555938976 1.1949381752984851 0.9988287420249775 1.192768026291026 1.1441856002537287 1.0504148429747315 1.0150526359109289 1.0 12.261561106243438 -9.049582721084082 2.5580366895100184 1.0189670973247487 1.110377357478154 0.23660630697178664 0.07350606839543265 0.2800994289230641 3.7531561138176914 0.013926010408553392 0.013773002709957417 8.9210768157084e-10 9.049582721084082 0.09141026015340525 VKVDGPRS(ph)PS(ph)YGR ddPTM_A549_PD325901_60min_R1 3 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 VKVDGPRS(0.962)PS(0.799)Y(0.239)GR;VKVDGPRS(0.992)PS(0.988)Y(0.02)GR;VKVDGPRS(0.999)PS(0.997)Y(0.004)GR 73.279 0.00040021 308520000.0 13737.1 13847.3 14972.199999999999 14328.4 14460.800000000001 12946.999999999998 13635.199999999999 14550.7 15183.5 17068.5 17383.199999999997 True False 15131.680279281472 15014.260568103584 15988.303527152584 15213.432725842564 13445.123295051731 12841.563924564167 14154.094997467731 14260.474873696676 14545.390297043556 15990.791997071572 15245.176601183868 0.9925552635517793 0.9848531742779318 1.0487450519865416 0.9979177758203969 0.8819263723063495 0.842336186749516 0.928431028891367 0.9354089655208897 0.954097855180899 1.048908281969643 1.0 13.896065242273396 -6.546504399688947 24.97678718473077 0.9541498000399986 1.0091647472302234 0.22847426856132247 0.05414301195843325 304.5376897024899 321953.0152193286 0.008022185186689946 0.01670028772080712 2.841159402022701e-07 6.546504399688947 0.05501494719022482 VKVDGPRS(ph)PSY(ph)GR ddPTM_A549_MK2206_60min_R1 1 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 VKVDGPRS(0.977)PS(0.404)Y(0.619)GR 50.653 0.012717000000000001 46242000.0 3193.1 3345.3 3110.3 2452.8 6169.0 3443.9 3148.7 3601.8 6214.6 5034.3 4507.0 True False 3732.017216200215 3515.561481068419 3551.387309230587 3053.736110110377 5261.5482720248865 3808.3312121241984 3720.778032567037 4112.366180049886 4807.0030226769395 3897.0481335268037 3387.787513127987 1.1016090004872816 1.037716051389084 1.0482910440718716 0.9013954087370798 1.5530927638276912 1.1241352054597775 1.0982914418772374 1.2138796084801924 1.4189210521761952 1.1503224799151024 1.0 11.726127674276103 VKVDGPRS(ph)PSYGR ddPTM_A549_MK2206_60min_R1 5 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 VKVDGPRS(0.992)PS(0.008)YGR;VKVDGPRS(0.998)PS(0.002)YGR;VKVDGPRS(1)PSYGR;VKVDGPRS(0.992)PS(0.007)Y(0.001)GR;VKVDGPRS(0.764)PS(0.234)Y(0.003)GR 137.89 2.3235999999999997e-09 1363002100.0 25185.199999999997 26605.6 24913.000000000004 22434.1 30997.4 23415.9 23947.399999999998 22539.1 36864.2 36412.6 37695.6 True False 29435.84604097762 27959.71139829433 28446.038013973448 27930.45550710501 26437.72352200749 25893.75499578356 28298.332599833524 25734.086448098842 28514.517560030778 28186.96837035101 28334.74217436597 1.0388605571152083 0.9867642777984786 1.0039278931469569 0.9857317682732716 0.933049729526931 0.9138517949603673 0.9987150200870583 0.9082167146514606 1.006344698129191 0.9947847132998214 1.0 14.790284454576527 VKVDGPRS(ph)PSYGR ddPTM_A549_PD325901_60min_R1 4 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 VKVDGPRS(0.991)PS(0.009)YGR;VKVDGPRS(0.999)PS(0.001)YGR;VKVDGPRS(0.993)PS(0.007)YGR;VKVDGPRS(0.996)PS(0.004)YGR 136.39 3.6215000000000004e-09 3808580000.0 34792.4 36400.9 38707.0 35925.799999999996 42029.8 39875.1 39427.6 41142.1 39557.200000000004 37787.2 43183.2 True False 38324.49883518883 39468.531591969644 41333.88978409952 38144.855072588354 39077.77184293853 39550.37040614729 40928.03889361059 40321.48854014695 37894.748447868515 35401.30974319609 37871.94016085894 1.011949709267803 1.0421576350281838 1.091411995491547 1.0072062564149136 1.0318397123822516 1.0443185703758326 1.080695594674343 1.0646797700060702 1.0006022476512346 0.9347635635468111 1.0 15.208841711222039 -8.775256524842069 24.785992528738383 1.0002843873194012 1.0473469153431134 0.447950802922759 0.031316946010111146 140.15293227715213 251413.4568035065 0.004201187791972612 0.004483748851109512 1.6778126912900612e-09 8.775256524842069 0.04706252802371225 VKVDPSHDASK ddPTM_A549_PD325901_60min_R1 1 VKVDPSHDASK 11 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 62.924 0.024971 4236100.0 1815.4 1810.8 1620.4 1855.9 2128.9 1977.2 1776.3 2027.4 2332.1 2019.2 1872.1 False True 1999.6980715731538 1963.4024710031524 1730.3700882567714 1970.5347279452867 1979.3734083062932 1961.098338738572 1843.8980685286556 1986.961916535469 2234.089947096207 1891.7073674011713 1641.8435682196775 1.2179589519247034 1.1958523388023836 1.0539189736164005 1.2001963926941124 1.2055797803274364 1.1944489576830248 1.123065622218854 1.2102017238402427 1.3607203453120251 1.1521848999612259 1.0 10.68110096104412 -5.529525518614626 24.867486340661756 1.1715881418670184 1.2124323833380277 0.029890157531685446 0.08832196615146469 680.3669537228487 2545466.122506418 0.017556209294250075 0.0683340733696006 2.9544352843612847e-06 5.529525518614626 0.04084424147100929 VKVEEEEEEKVAEEEET(ph)SVKK ddPTM_A549_PD325901_60min_R1 2 VKVEEEEEEKVAEEEETSVKK 21 3 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 VKVEEEEEEKVAEEEET(0.5)S(0.5)VKK;VKVEEEEEEKVAEEEET(0.5)S(0.5)VKK 92.242 5.2229e-07 34672000.0 5759.6 4709.8 4865.6 5750.0 6074.200000000001 5298.1 4923.200000000001 4819.8 5645.7 5766.799999999999 6326.200000000001 True False 6344.310352006579 5106.711375044535 5195.808875229668 6105.164440802514 5647.569146852409 5254.954030179454 5110.555070078413 4723.665307940046 5408.430862450606 5402.683263831757 5548.11750508591 1.1435068464557223 0.9204403782658277 0.9364994289444512 1.100402872723219 1.0179252947824793 0.9471598295029412 0.9211331709167322 0.8513996510726213 0.9748226957148519 0.973786740976406 1.0 12.437782627876867 -7.243658166464243 21.87064615608088 0.968300404271572 1.0174259770920768 0.19381963743964248 0.07144742315056075 324.0316684106232 398551.40883055853 0.010814926854635597 0.01869058091783423 5.70613225700332e-08 7.243658166464243 0.04912557282050478 VKVEPAVDTSR ddPTM_A549_MK2206_60min_R1 2 VKVEPAVDTSR 11 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 91.62 0.00029883 8603200.0 3717.3 4243.0 4131.200000000001 3061.1000000000004 4386.9 4175.1 3580.3 3182.3 5500.6 6319.5 5891.1 False True 4344.689360740679 4458.950576681704 4717.066280388842 3811.0696374180006 3741.592821291289 4616.906310792921 4230.794165846145 3633.400770385017 4254.72288265323 4891.92056091664 4428.1772839113155 0.9811462103213507 1.0069494265467183 1.065238805484851 0.8606407090485237 0.8449509993390371 1.042620025076075 0.9554256513662375 0.8205183617164737 0.960829390935117 1.1047255444560047 1.0 12.11249726683118 -3.6995124708380853 15.406825124634283 0.9650550526925159 0.961216720081183 0.0 0.08796949068579643 0.0 0.0 0.010079560839798152 0.0 0.00019975034089774488 3.6995124708380853 -0.0038383326113329286 VKVEPAVDTSR ddPTM_A549_PD325901_60min_R1 1 VKVEPAVDTSR 11 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 44.511 0.055969000000000005 7195500.0 5096.0 5078.3 4628.2 5867.3 7127.8 7543.8 5932.4 6450.7 8002.3 5035.0 5367.2 False True 5613.342168523078 5506.266163295401 4942.297483627492 6229.7097953948905 6627.167917575088 7482.365793938923 6158.160728333838 6322.035728023745 7665.9911597478595 4717.089240721526 4707.068425484031 1.1925346438841824 1.169786726167931 1.049973579493753 1.3234797611327025 1.4079183301639835 1.5896020872417012 1.3082794154836597 1.3430940782157095 1.6286126452388592 1.0021288866724867 1.0 12.200613109941 -6.329768468266365 8.036143933150854 1.337375688226768 1.140965780082391 0.162124612162997 0.18887898866855826 0.5231388287254419 56.64488818955119 0.03332503794001648 0.07775687051918173 4.679845674372575e-07 6.329768468266365 -0.1964099081443771 VKVEPSHDASK ddPTM_A549_PD325901_60min_R1 2 VKVEPSHDASK 11 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 77.305 0.004111600000000001 8747100.0 3843.2000000000003 3888.8999999999996 3169.0 3200.1 5018.2 4108.7 3482.3999999999996 3503.3999999999996 4460.8 5128.299999999999 4118.3 False True 4233.358834785693 4216.631251095736 3384.067396745067 3397.7629090455903 4665.738943850179 4075.2401094351435 3614.9246376424003 3433.5219386358685 4273.328088849863 4804.498262798846 3611.7752080546466 1.1720992007877036 1.167467798575115 0.9369540466411734 0.940745952701656 1.291813215131739 1.128320527907418 1.0008719893698617 0.9506466324312615 1.1831655744576468 1.3302318073628443 1.0 11.818492388910323 -5.580319779382745 24.999992975982146 1.0719653889162597 1.1709493462821583 0.05150563597550295 0.1317626817512198 124.20452658717163 54056.84996314926 0.015649038293488318 0.06060848253016547 2.6283319878132312e-06 5.580319779382745 0.0989839573658986 VKYS(ph)GSK ddPTM_A549_MK2206_60min_R1 2 VKYSGSK 7 1 P48506;E1CEI4;B4E2I4;A0A2R8YEL6;A0A2R8Y648 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 VKY(0.005)S(0.889)GS(0.106)K;VKY(0.006)S(0.979)GS(0.015)K 51.445 0.013869 33537000.0 30464.0 30122.0 26605.0 20611.0 33075.0 25860.0 22869.0 26966.0 36864.0 38156.0 37626.0 True False 35605.57842670861 31655.081138535563 30377.989056386792 25660.695925262953 28209.711314187552 28596.48803552128 27024.001278869215 30788.5130799115 28514.362859711422 29536.533099507116 28282.425775228246 1.258929439422219 1.119249154584941 1.074094184770883 0.907301803925829 0.9974289878237961 1.0111045022371494 0.9555050720769062 1.0886093478897507 1.0082007493390586 1.0443422828807458 1.0 14.78761824452723 -5.480670284685984 1.6725672448219189 1.0018072086419691 1.28793600703315 0.7341987572038285 0.04603579921121195 0.21488841846463025 0.7908997603635214 0.005917850284241712 0.08571550250258225 3.3062045202202896e-06 5.480670284685984 0.2861287983911809 VKYS(ph)GSK ddPTM_A549_PD325901_60min_R1 2 VKYSGSK 7 1 P48506;E1CEI4;B4E2I4;A0A2R8YEL6;A0A2R8Y648 P48506 GCLC Glutamate--cysteine ligase catalytic subunit 1 VKY(0.001)S(0.995)GS(0.004)K;VKY(0.002)S(0.99)GS(0.008)K 61.65 0.007771899999999999 30800000.0 22571.0 22015.4 20732.5 20789.0 25059.0 22727.5 19778.6 22803.0 27638.0 33823.0 35524.0 True False 24862.391304107994 23870.715021053016 22139.532124650395 22073.089314755387 23298.942288856866 22542.4147752786 20531.285446265196 22348.176276392547 26476.470973733958 31687.4100077307 31154.77320518982 0.7980283194604149 0.7661976822568103 0.7106305020690169 0.7084978333618044 0.7478450295691988 0.7235621529584251 0.6590093052850423 0.7173275224699677 0.8498367424906645 1.0170964750419738 1.0 14.927165594224347 -9.404875640299291 0.9007018832343662 0.9719141589371919 0.7263656108526537 0.8483727600469455 0.04415662521646409 0.13816466749015646 0.23824157768140422 0.014009874384796851 0.010275098227891561 3.93662784181111e-10 9.404875640299291 -0.2455485480845382 VLAAVYK ddPTM_A549_MK2206_60min_R1 2 VLAAVYK 7 0 H3BQN4;J3KPS3;P04075;P04075-2;H3BPS8;A0A087WXX2;A0A3B3IS80;P05062;P09972 H3BQN4;P09972 ALDOA;ALDOB;ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase B;Fructose-bisphosphate aldolase C 0 ; 123.34 0.01736 14216900.0 11003.0 12097.0 10731.1 11157.400000000001 13835.1 9959.2 9360.2 9459.599999999999 14161.8 14073.599999999999 13374.1 False True 12860.03740247751 12712.685629535377 12252.931342341379 13890.963500874726 11799.975117246155 11013.075933618084 11060.827179608714 10800.527268810005 10954.174911747543 10894.3639854603 10052.941863617709 1.2792312516019688 1.2645736742538485 1.2188403661902776 1.38178094425743 1.173783284269362 1.095507771061043 1.1002577483948863 1.0743648392017324 1.0896486879518779 1.0836990935845114 1.0 13.29533012881283 -7.1813968053527 2.129822386784652 1.0512898177377057 1.27997792442518 0.8035818487179931 0.048072949585540085 0.10266226264380884 0.9092521989024241 0.008057190663401288 0.015144960620200435 6.585718975566989e-08 7.1813968053527 0.2286881066874744 VLAET(ph)PDSFEK ddPTM_A549_MK2206_60min_R1 2 VLAETPDSFEK 11 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 VLAET(0.991)PDS(0.009)FEK;VLAET(1)PDSFEK 142.08 3.1744e-11 14592500.0 5145.9 5864.4 5953.0 4473.4 7738.9 5848.1 5806.200000000001 5836.6 8166.200000000001 7937.3 7990.3 True False 6014.402114824055 6162.8729111223665 6797.224914590136 5569.383200818557 6600.5180616588395 6466.9420603453955 6861.111383329861 6663.955923837849 6316.568738741743 6144.258417305739 6006.087988938666 1.0013842830642343 1.0261043332153057 1.1317225000879934 0.9272896452858529 1.0989712561345968 1.0767311554968022 1.1423594519370812 1.1095335160108826 1.0516943392062996 1.023005062300376 1.0 12.552209895134176 -3.61170041520931 16.58501617767527 1.0439032335060736 0.44011399908517546 0.0 0.06322518474520732 0.0 0.0 0.008336323241513654 0.0 0.00024451166601584826 3.61170041520931 -0.6037892344208982 VLAET(ph)PDSFEK ddPTM_A549_PD325901_60min_R1 2 VLAETPDSFEK 11 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 VLAET(0.964)PDS(0.036)FEK;VLAET(0.999)PDS(0.001)FEK 171.26 4.4679e-15 26239000.0 11076.900000000001 11175.8 11053.5 12008.4 14038.8 11818.4 11420.4 12034.9 11922.7 12115.1 12381.7 True False 12201.418733617204 12117.623887473519 11803.656980095173 12750.131594944867 13052.76311923078 11722.154868778036 11855.009571482666 11794.854478303598 11421.630381306104 11350.1505184241 10858.829394063137 1.123640338275146 1.1159235906311047 1.0870100773982694 1.174171831257959 1.2020414582042458 1.0795044699004945 1.091739186727086 1.0861994465768303 1.051828881992627 1.0452462329530274 1.0 13.406580965343073 -8.735778580315342 0.6392372987742094 1.009834202507599 1.135240668859847 0.597327552919587 0.034612251072966393 0.2782318371403584 0.24546567102996494 0.010478744607811986 0.010634787103341939 1.837474918499705e-09 8.735778580315342 0.12540646635224806 VLAGDKNFITAEELR ddPTM_A549_MK2206_60min_R1 2 VLAGDKNFITAEELR 15 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 144.33 1.4815e-13 12363200.0 4427.9 4968.6 5430.4 4567.9 7673.0 5565.4 5110.1 4954.1 7840.4 7140.200000000001 7521.7 False True 5175.221268238679 5221.4805173935265 6200.512376312828 5687.035705060823 6544.3118643616335 6154.326933986469 6038.539023794205 5656.358846294945 6064.5619185460455 5527.22386091573 5653.854301640737 0.9153439392198063 0.9235258354426048 1.0966876833938668 1.00586881119495 1.157495668479198 1.0885188414212401 1.0680393766146101 1.0004429800487573 1.0726420588493273 0.97760281146823 1.0 12.465018990433098 -5.746096142143489 24.70727108000416 1.0479847110747467 0.9194347426779221 0.5021247574411689 0.050759149745583834 128.19592105966396 206430.2701668279 0.006796758851206828 0.02611525607539546 1.7943363608129105e-06 5.746096142143489 -0.12854996839682453 VLAGDKNFITAEELR ddPTM_A549_PD325901_60min_R1 2 VLAGDKNFITAEELR 15 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 147.24 1.0366e-13 19185800.0 10283.599999999999 9596.3 9797.7 10620.6 11345.8 11248.6 10341.3 10151.3 11232.0 11691.099999999999 11197.4 False True 11327.5835016138 10405.013879217782 10462.630840356316 11276.610340867335 10548.910148885125 11156.995131061445 10734.843830476499 9948.82435795921 10759.95810033215 10952.921950784388 9820.19078616689 1.153499330946837 1.0595531294437475 1.0654203231055748 1.1483086822256057 1.0742062327083033 1.1361281439437645 1.0931400483173936 1.01309888724092 1.0956974599199287 1.1153471647631437 1.0 13.26153533808017 -14.99999999999948 0.2036251726245662 0.5480027363505054 1.1088957896994025 0.0 0.051642355804788195 30.16789112619431 0.35815840709028735 5.43119446654465 0.030407028060563203 1.0000000000011984e-15 14.99999999999948 0.560893053348897 VLAGVVMT(ph)T(ph)GTDVKDAK ddPTM_A549_MK2206_60min_R1 1 VLAGVVMTTGTDVKDAK 17 1 P78563-6;P78563-2;P78563-3;P78563-4;P78563;P78563-5 P78563-6 ADARB1 Double-stranded RNA-specific editase 1 2 VLAGVVMT(0.94)T(0.566)GT(0.495)DVKDAK 46.027 0.015341 12424000.0 1826.5 2883.3 1887.7 2088.4 2317.4 2473.5 1907.8 1724.1 1729.4 2719.2 2497.6 True False 2134.768546362371 3030.0476544299686 2155.4042451321684 2600.05809375184 1976.5135298412183 2735.244128223585 2254.422565036807 1968.4964548348078 1337.6936612843133 2104.9308314335813 1877.37698974672 1.1371016892299166 1.6139793291270483 1.1480934606655413 1.3849419205370244 1.052805877900886 1.456949852460161 1.200836367628515 1.0485355182180969 0.7125333210059125 1.1212083896466425 1.0 10.874502666651292 -8.360769406204053 2.712395503849097 0.8650881973130939 1.2982043325549841 0.3986206816981641 0.18069319629969186 0.14661648273458544 2.1045207973102134 0.02850177929008283 0.035156069038417094 4.3574317527081604e-09 8.360769406204053 0.4331161352418902 VLAPILPDNFS(ph)TPTGSR ddPTM_A549_PD325901_60min_R1 1 VLAPILPDNFSTPTGSR 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 VLAPILPDNFS(0.49)T(0.49)PT(0.017)GS(0.004)R 142.19 3.4001000000000003e-16 22313000.0 3551.1 3528.0 3321.1 3028.8 3542.9 3369.6 2927.0 3551.9 3782.2 3950.1 3740.0 True False 3911.6050578183504 3825.316941517079 3546.489817396668 3215.882097096118 3294.058926341474 3342.159094787321 3038.388586715859 3481.054568088352 3623.247286954793 3700.690011871718 3280.003709813363 1.192561168792375 1.1662538460161513 1.081245672614946 0.9804507499411048 1.0042851221436304 1.0189497910590761 0.9263369360300961 1.0612959240483386 1.1046473136949473 1.12825787385536 1.0 11.679481731251274 -5.829989131557924 3.022415891331745 1.033269415242541 1.1858994254032273 0.538664797954873 0.05361839862667321 0.15180683221053484 2.7390060901541493 0.007792557154347733 0.03165762614590073 1.4791454040771415e-06 5.829989131557924 0.15263001016068634 VLAT(ph)EDRSDHLIQTDTVNLHR ddPTM_A549_MK2206_60min_R1 2 VLATEDRSDHLIQTDTVNLHR 21 1 P51151 P51151 RAB9A Ras-related protein Rab-9A 1 VLAT(0.588)EDRS(0.412)DHLIQTDTVNLHR;VLAT(0.568)EDRS(0.432)DHLIQTDTVNLHR 121.62 3.9241e-15 11220100.0 1893.7599999999998 1608.35 2112.11 1691.2 2429.8999999999996 2011.6999999999998 1592.98 2101.2200000000003 2604.7 2581.5 2675.2 True False 2213.380390013252 1690.2081451817166 2411.6389575600497 2105.5440759208527 2072.464928869066 2224.576758741614 1882.4038461328919 2399.0743697163684 2014.7396088511914 1998.3373570703861 2010.8740082360757 1.100705653833983 0.8405340853076892 1.1992988857991764 1.0470790647733426 1.0306289306941798 1.1062735654398341 0.9361122767627411 1.1930505640285336 1.0019223484908966 0.9937655710331217 1.0 10.973606976754265 -8.934275937759265 24.999716868801244 1.0008427974079146 1.0536232952242555 0.06461014701948053 0.09792778663864354 124.96578245121505 47532.923116224876 0.015456665131402536 0.016454780085084626 1.163386613382347e-09 8.934275937759265 0.052780497816340866 VLATEDRS(ph)DHLIQTDTVNLHR ddPTM_A549_PD325901_60min_R1 2 VLATEDRSDHLIQTDTVNLHR 21 1 P51151 P51151 RAB9A Ras-related protein Rab-9A 1 VLAT(0.152)EDRS(0.848)DHLIQTDTVNLHR;VLAT(0.029)EDRS(0.971)DHLIQTDTVNLHR 144.27 5.5548e-22 17286800.0 1523.26 2111.89 1883.98 1876.48 2084.58 1635.73 1476.91 1808.5900000000001 1694.94 1897.5 2223.46 True False 1677.9002338352568 2289.8663819786 2011.8382120920717 1992.3859078047149 1938.166292210594 1622.409157204553 1533.1146182461632 1772.5162536385917 1623.7075661126214 1777.6915261706235 1949.9885156742312 0.8604667260079238 1.1742973682010902 1.0317179798345917 1.021742380424135 0.9939372855949619 0.8320095960378444 0.7862172550878184 0.9089880475658717 0.8326754506814137 0.9116420491102052 1.0 10.92924991200691 -7.064856565387774 5.399701631298347 0.9014096782119481 1.0310709858022777 0.3724200431708484 0.08658447646853469 0.21631449005751388 12.459493762010428 0.014190922179634385 0.025100392472307165 8.612781598986128e-08 7.064856565387774 0.12966130759032968 VLATVTKPVGGDK ddPTM_A549_PD325901_60min_R1 2 VLATVTKPVGGDK 13 1 Q02878;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q02878 RPL6 60S ribosomal protein L6 0 ; 126.71 3.7111e-20 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VLAVNQENEHLMEDYEK ddPTM_A549_MK2206_60min_R1 3 VLAVNQENEHLMEDYEK 17 0 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;; 134.44 3.0403e-12 5269300.0 3303.43 3898.7000000000003 4082.1099999999997 3548.8 4969.4 4222.25 3722.3900000000003 3896.1 5719.5 5538.200000000001 6667.4 False True 3860.968222890693 4097.127177305905 4661.01458022804 4418.256159311686 4238.4078429243755 4669.045692497281 4398.700079603397 4448.384106305836 4424.042382164699 4287.1167735530535 5011.700569121265 0.7703908423179524 0.8175123634779086 0.9300265480635622 0.8815882150928998 0.8457025284069443 0.9316290205493933 0.8776861304734035 0.8875997368465692 0.8827427579019143 0.8554215708670604 1.0 12.29108450611587 -14.999999999999998 0.122998641007797 1.4296659477493678 0.8079408774979921 0.03608936203877522 0.05720222981122935 39.271218653387045 0.3346855053791049 4.196833425741767 0.14374044398634203 1.000000000000004e-15 14.999999999999998 -0.6217250702513757 VLAVNQENEHLMEDYEK ddPTM_A549_PD325901_60min_R1 2 VLAVNQENEHLMEDYEK 17 0 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 176.21 3.9885999999999996e-30 13535800.0 5705.3 6339.2 6281.5 6577.3 6608.5 5819.8 6129.1 6636.7 6359.4 6665.6 7450.599999999999 False True 6284.497855980127 6873.426631424336 6707.800363728035 6983.564882867897 6144.34175808734 5772.405478348539 6362.346254472211 6504.325812109568 6092.1365334092125 6244.732878441589 6534.2234332447715 0.9617819041825089 1.0519117844140085 1.026564278411439 1.0687673836399547 0.9403323625002178 0.8834110950323093 0.9736958522265882 0.9954244568707138 0.9323428553749306 0.9556962571358801 1.0 12.673800072239247 -6.771170740510939 24.999579021334384 0.9617941159162627 1.028968011106395 0.4373252682248131 0.03916349491873047 166.97160236017586 428945.9985039848 0.006170564577767259 0.01176480161275079 1.6936718116898178e-07 6.771170740510939 0.06717389519013228 VLDDVSIRS(ph)PETK ddPTM_A549_MK2206_60min_R1 2 VLDDVSIRSPETK 13 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 VLDDVS(0.004)IRS(0.996)PET(0.001)K;VLDDVS(0.024)IRS(0.976)PET(0.001)K 107.5 2.3021999999999997e-05 190272000.0 3077.8999999999996 3246.1000000000004 3272.9 2772.8999999999996 3817.0 3712.5 2882.7 3159.7 4830.6 4301.8 4757.200000000001 True False 3597.374272569803 3411.3126247858777 3737.046434228464 3452.2606244802114 3255.5243563493264 4105.354285841945 3406.449275726806 3607.597151175419 3736.4768128830856 3330.0203922701467 3575.855947959278 1.0060176709922573 0.9539849128242136 1.0450774551925606 0.9654361570270743 0.9104182058025119 1.148075969946398 0.9526248610967811 1.0088765329694713 1.0449181586902214 0.9312512698310935 1.0 11.804072903915207 VLDDVSIRS(ph)PETK ddPTM_A549_PD325901_60min_R1 2 VLDDVSIRSPETK 13 1 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 VLDDVS(0.001)IRS(0.998)PETK;VLDDVS(0.002)IRS(0.992)PET(0.005)K 127.75 1.5115e-08 272980000.0 5211.1 5734.3 6205.5 5431.8 7232.200000000001 5427.0 6519.4 6526.299999999999 6416.0 5609.1 7319.0 True False 5740.127035790939 6217.5495855275985 6626.642546702913 5767.30994948715 6724.235221735533 5382.804311316112 6767.49933455257 6396.1278267166945 6146.357832241011 5254.940468745009 6418.80939896364 0.8942666278138311 0.9686453046154422 1.0323787691488127 0.8985015118875973 1.047582940041997 0.8385985588207685 1.0543231484089912 0.9964663895066572 0.9575541896030411 0.8186783782041346 1.0 12.648090006697597 VLDEEGS(ph)ER ddPTM_A549_MK2206_60min_R1 2 VLDEEGSER 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VLDEEGS(1)ER;VLDEEGS(1)ER 96.015 0.00090333 50057000.0 1768.2800000000002 1954.45 1802.96 1106.3600000000001 3714.6 2534.7 2155.08 2331.9 3328.1000000000004 2546.3999999999996 2898.0 True False 2066.7224337047123 2053.9231568690916 2058.6468389063384 1377.4182496663882 3168.187260700866 2802.92027160231 2546.63014019264 2662.453966144241 2574.2906638836157 1971.1664714483932 2178.3466192688966 0.9487573811363189 0.942881696925917 0.9450501681854782 0.6323228073449034 1.4543999713710312 1.2867191322118583 1.1690656196153704 1.222236141205949 1.1817635637562616 0.9048911013573966 1.0 11.089017819117675 -6.752360809039181 24.999994350361842 1.1412890000525069 0.8782120830927547 0.4545158375969951 0.15899832161470953 160.42639215608895 441768.5920779791 0.022701408840211098 0.04673028375345298 1.7686389739852208e-07 6.752360809039181 -0.2630769169597522 VLDEEGS(ph)ER ddPTM_A549_PD325901_60min_R1 2 VLDEEGSER 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VLDEEGS(1)ER;VLDEEGS(1)ER 107.83 0.00046937 44800000.0 3003.8 2801.0 3791.4 3883.4 3119.9 5471.6 2376.7 2775.5 5437.4 3048.5 3906.7 True False 3308.7435647193156 3037.050100110353 4048.7072035403153 4123.268798158695 2900.768987070696 5427.041103703197 2467.146619080143 2720.1404751623722 5208.884987067841 2856.0171897397345 3426.2006666117272 0.9657179735451489 0.8864192134764199 1.1816900402229515 1.2034522199297566 0.8466430513946964 1.5839822683445337 0.7200823475176013 0.7939232811639141 1.520309372953063 0.8335814120788598 1.0 11.742393934696862 -8.755477935466454 24.997260322186943 1.2457016455995886 1.0322667132485899 0.0 0.28220993791593335 247.9234896650931 1039580.4495980024 0.047941193822629895 0.05367216334743642 1.7559901058285728e-09 8.755477935466454 -0.21343493235099875 VLDEEGS(ph)EREFDEDS(ph)DEKEEEEDTYEK ddPTM_A549_PD325901_60min_R1 4 VLDEEGSEREFDEDSDEKEEEEDTYEK 27 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 VLDEEGS(1)EREFDEDS(1)DEKEEEEDTYEK;VLDEEGS(1)EREFDEDS(1)DEKEEEEDTYEK;VLDEEGS(1)EREFDEDS(1)DEKEEEEDTYEK;VLDEEGS(1)EREFDEDS(1)DEKEEEEDTYEK 220.79 5.9868e-83 233050000.0 18989.5 19442.0 19663.3 19217.3 20971.2 15679.8 15661.400000000001 15921.3 19120.0 19760.6 20440.3 True False 20917.300060668946 21080.44557170492 20997.769783028492 20404.308975345073 19498.25525871244 15552.108907421129 16257.403147246914 15603.737181481782 18316.452891591056 18512.9123436349 17926.272681737453 1.1668516055754652 1.1759525220868032 1.1713405321799077 1.138234887843257 1.0876915466412858 0.8675595414357931 0.9069037069713486 0.870439575393619 1.021765830341915 1.0327251332339205 1.0 14.129787926730618 -6.984419127689559 3.8966412296241693 0.9809781409453925 1.1627074058515336 0.7405036417036084 0.05786490486468072 0.11087008021480882 3.775228161360965 0.009746677814160167 0.018488885754352133 1.0365276038387124e-07 6.984419127689559 0.18172926490614116 VLDEEGS(ph)EREFDEDSDEKEEEEDTYEK ddPTM_A549_MK2206_60min_R1 1 VLDEEGSEREFDEDSDEKEEEEDTYEK 27 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VLDEEGS(1)EREFDEDSDEKEEEEDTYEK 140.52 3.4466e-27 13567000.0 1161.6 1244.4 1208.2 1122.2 1571.5 1430.6 1532.7 1705.2 1980.9 1534.5 2191.8 True False 1357.6496816066426 1307.7346447378545 1379.540927567244 1397.1390503774728 1340.3344317534627 1581.985142444577 1811.171750409851 1946.917321955985 1532.2293128472857 1187.8553842434658 1647.5155693973652 0.8240587869547412 0.7937616305600091 0.8373462158368906 0.84802782828239 0.8135488711913876 0.9602246994383439 1.099335134703673 1.1817292401480226 0.9300241778035219 0.7209979719208143 1.0 10.686076383756557 -7.330877778488892 4.4750128596534955 0.9957827657021942 0.8236003204171957 0.3496009645004359 0.10758291589732694 0.13868879547444385 5.423395621239321 0.012010308103740258 0.019620993978591624 4.667907286123419e-08 7.330877778488892 -0.1721824452849985 VLDLELK ddPTM_A549_MK2206_60min_R1 2 VLDLELK 7 0 P04083 P04083 ANXA1 Annexin A1 0 ; 119.21 0.018791 15372700.0 4086.8999999999996 4295.9 4539.700000000001 3937.2 5197.6 4817.0 5057.6 5280.8 6157.5 5220.4 5258.8 False True 4776.668804888242 4514.542960727535 5183.497722957302 4901.814176747623 4433.039925219086 5326.731742734184 5976.500453365211 6029.369571771734 4762.836081506974 4041.1080142747373 3952.8948245035454 1.2083976470302766 1.1420852719739458 1.311316883724148 1.2400568176926525 1.1214667027665841 1.3475521052860755 1.5119300458786722 1.5253048308789694 1.2048982563317128 1.0223160983753903 1.0 11.94869385424264 -9.779430962402573 1.1661750610160706 1.0375823589612794 1.2924803478953013 0.4133965510315192 0.12708386519127918 0.32582937054230143 0.902033745368329 0.041176641871217334 0.02691480009924357 1.6617628188027742e-10 9.779430962402573 0.25489798893402194 VLDLELK ddPTM_A549_PD325901_60min_R1 2 VLDLELK 7 0 P04083 P04083 ANXA1 Annexin A1 0 ; 119.21 0.018791 30367000.0 6559.8 6328.8 7487.099999999999 6920.3 8166.8 6611.700000000001 7266.700000000001 7133.3 7052.6 7224.0 7036.5 False True 7225.7460669304755 6862.150186925535 7995.219629589777 7347.751213858374 7593.192141930494 6557.856507302152 7543.238244990816 6991.020735534409 6756.203748077146 6767.875407144445 6171.05510804859 1.1709093405285436 1.1119897759421375 1.2956001023491142 1.1906798894527906 1.2304528170599356 1.0626799457274456 1.222357945751053 1.1328728415366733 1.0948214899694182 1.0967128454771782 1.0 12.591301462693412 -9.233669977261988 0.4738387285760435 1.0002475582568313 1.1967431215423816 0.38649368729705447 0.06363051034495942 0.42096652774600507 0.22595326043374478 0.03073989450160042 0.019730705676379006 5.838886358803091e-10 9.233669977261988 0.1964955632855503 VLDLELKGDIEK ddPTM_A549_MK2206_60min_R1 2 VLDLELKGDIEK 12 1 P04083 P04083 ANXA1 Annexin A1 0 ; 124.86 5.227e-06 8434500.0 2507.0 3118.4 2853.0 2956.3 4283.4 2788.2 3003.0 2393.2 3918.9 4042.2 4315.7 False True 2930.12030973472 3277.113240236679 3257.5983002394846 3680.59363271335 3653.317534185669 3083.245473342632 3548.606228538381 2732.443428867617 3031.2754071973504 3129.0642125701775 3243.9925827393954 0.9032450706963007 1.010209843781244 1.0041941271914376 1.134587561111273 1.1261793734129375 0.9504477568006582 1.0939008453409453 0.8423087782032473 0.9344273545279146 0.964571938055368 1.0 11.663554805555952 -8.227584453852648 24.999570698002948 0.9586654268964371 1.0343812377850083 0.2523952782357275 0.07604881023199661 844.3651756254299 623507.6241574988 0.012477269977977674 0.01610766572135766 5.921279291903617e-09 8.227584453852648 0.07571581088857127 VLDLELKGDIEK ddPTM_A549_PD325901_60min_R1 2 VLDLELKGDIEK 12 1 P04083 P04083 ANXA1 Annexin A1 0 ; 150.16 3.4969999999999997e-12 19733400.0 6693.6 7294.1 6944.8 7452.4 7988.0 8967.2 9066.2 9282.599999999999 8475.3 7668.3 8607.9 False True 7373.129344432121 7908.799405646178 7416.115890474962 7912.717822371593 7426.95043710398 8894.174096265684 9411.219202215005 9097.451260941169 8119.11261464967 7184.122229319732 7549.182869973919 0.9766791282481667 1.0476364848840258 0.9823733267837216 1.048155536653324 0.9838085214022162 1.178163815800691 1.2466540239271644 1.2050908578629516 1.0754955542198597 0.9516423635588194 1.0 12.882104779002452 VLDPFTIKPLDR ddPTM_A549_MK2206_60min_R1 2 VLDPFTIKPLDR 12 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 150.49 3.2138e-12 31820000.0 8424.5 9525.4 8445.5 7824.2 13021.5 9619.7 10344.2 9788.5 14300.0 12720.9 12300.0 False True 9846.349640749955 10010.202173727055 9643.19889403175 9741.129351241687 11106.05459947674 10637.650268959937 12223.607242506405 11176.049851024016 11061.072832407592 9847.239854951256 9245.570537269643 1.0649802087452065 1.0827024825969496 1.043007443960244 1.0535995925805126 1.2012297731878563 1.150567206867192 1.3221041571455276 1.208800452711107 1.196364549685659 1.0650764942256659 1.0 13.17454663467471 -6.715096587382107 24.99402697930921 1.1320027285056489 1.0613269575450561 0.21052936111508547 0.08206723758064066 256.08821300795694 138114.61980038678 0.015287564990548428 0.03182352185694798 1.927096278032242e-07 6.715096587382107 -0.07067577096059274 VLDPFTIKPLDR ddPTM_A549_PD325901_60min_R1 2 VLDPFTIKPLDR 12 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 143.25 9.6078e-12 55546000.0 19898.9 18846.7 19104.5 20855.5 25483.0 25350.0 21347.5 23103.0 29333.0 22370.0 24278.0 False True 21919.021679204052 20434.97755149941 20401.04625469112 22143.696868722942 23693.161991577465 25143.558004765706 22159.890794300238 22642.192541047127 28100.23601825524 20957.554382311922 21291.959910922138 1.0294506363390366 0.9597508936233192 0.9581572734516559 1.0400027503979983 1.1127750611358038 1.1808944836434627 1.0407633156839111 1.0634151405400853 1.3197580746824842 0.9842942815030065 1.0 14.37802113458281 -6.662380686430243 2.4977953740004457 1.1400998671579279 0.9809137741403064 0.16294560698963778 0.09406006349826461 0.306551849282652 3.872994329802566 0.017467577969739922 0.04027868255730392 2.1758017091519703e-07 6.662380686430243 -0.15918609301762143 VLDPFTIKPLDRK ddPTM_A549_MK2206_60min_R1 2 VLDPFTIKPLDRK 13 2 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 112.51 1.0919000000000002e-05 7220100.0 1939.6100000000001 2135.42 2140.3 1780.23 2713.3999999999996 2157.5 1960.7399999999998 1815.69 3369.5 3364.6 3385.9 False True 2266.9687490883766 2244.103756883724 2443.8267234499017 2216.386429917561 2314.262454419246 2385.8052179674073 2316.9810777703447 2073.0696178174194 2606.31362998583 2604.534523183816 2545.087583913925 0.8907232754647102 0.881739304795422 0.9602132118737146 0.8708487849008026 0.9093056243118722 0.9374157624463487 0.9103738089072794 0.8145376335651995 1.024056557604886 1.023357522014418 1.0 11.31349958917685 -8.788444372264518 24.99994922935779 1.011360065124233 0.8998456103025613 0.6835912731771012 0.03595404952972118 87.12375559875007 80654.66326718824 0.005997563109567949 0.006385672860992848 1.6276297814744153e-09 8.788444372264518 -0.11151445482167166 VLDPFTIKPLDRK ddPTM_A549_PD325901_60min_R1 2 VLDPFTIKPLDRK 13 2 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 148.96 3.5752e-13 15271400.0 2400.81 2229.24 2641.63 3085.8999999999996 3180.7 3470.6000000000004 3296.4 3104.8999999999996 3202.3 2971.3 3222.7 False True 2644.5384638170895 2417.10587831846 2820.906897211636 3276.5090344126056 2957.2986048193097 3442.336584273761 3421.8463058592943 3042.970333753069 3067.7184672982244 2783.691610914771 2826.328330378483 0.9356798484424316 0.855210575621544 0.9980818105566239 1.1592811065846118 1.046339370070033 1.217953536138806 1.2107037491291974 1.0766513929206432 1.0854076769231606 0.9849144492501328 1.0 11.464713355816727 -5.969859486304205 5.13320624457372 1.0756195057683509 0.89893663236967 0.5028667542205563 0.07616499861744241 0.1316630687119252 9.069340256590984 0.011532673065098448 0.03640421945050704 1.0718660457640278e-06 5.969859486304205 -0.17668287339868083 VLDS(ph)PSRLDEEHR ddPTM_A549_MK2206_60min_R1 2 VLDSPSRLDEEHR 13 1 E7EVB6;O60941-6;O60941;O60941-7;O60941-3;O60941-4 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 1 VLDS(0.979)PS(0.021)RLDEEHR;VLDS(0.998)PS(0.002)RLDEEHR 118.47 5.7536e-06 12469600.0 560.7 523.88 563.71 396.77 761.82 654.02 500.28 401.1 733.6700000000001 723.47 664.3199999999999 True False 655.3324522011403 550.5432543276015 643.6525544437436 493.9786678116823 649.757287176852 723.2279622966602 591.1744002707896 457.95715331723255 567.4949164302428 560.0376245282636 499.3510097007291 1.3123683330367029 1.1025175550512112 1.288978177553896 0.9892413517051533 1.3012035112660818 1.4483358364091523 1.183885460900724 0.9171046907298641 1.1364649423065225 1.1215309745020945 1.0 8.963910478143902 -8.016442208879871 24.389717467518672 1.0549683996907666 1.235087331739527 0.3528378893157358 0.12425707661954864 476.96399857816334 707509.5686513315 0.01981427642956153 0.025950639614355023 9.628481296594855e-09 8.016442208879871 0.1801189320487604 VLDS(ph)PSRLDEEHR ddPTM_A549_PD325901_60min_R1 1 VLDSPSRLDEEHR 13 1 E7EVB6;O60941-6;O60941;O60941-7;O60941-3;O60941-4 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 1 VLDS(0.999)PS(0.001)RLDEEHR 98.507 6.7487e-05 8238200.0 431.78 336.12 344.76 306.23 431.33 406.52 332.19 507.73 456.97 465.93 440.49 True False 475.61398774036394 364.4460120132427 368.1574868102966 325.1451316012097 401.0348688077195 403.2094359012763 344.8316722313429 497.6029268435202 437.76514005598136 436.5111002838889 386.31252249617353 1.231163785908791 0.9433968375095906 0.9530042785862403 0.8416634529480734 1.0381099380791927 1.0437389740718803 0.8926235939834399 1.2880838644013903 1.133189100957289 1.1299429215065442 1.0 8.593624633718669 VLDSGAPIKIPVGPETLGR ddPTM_A549_MK2206_60min_R1 2 VLDSGAPIKIPVGPETLGR 19 1 H0YH81;P06576;F8W079 H0YH81 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial 0 ; 94.45 3.0783999999999996e-06 5838100.0 4165.7 4623.3 4247.3 3872.9 5690.9 4666.4 3998.0 3695.0 6478.2 5825.8 5551.0 False True 4868.768318413213 4858.606222289074 4849.6310061714585 4821.76067386109 4853.776148689646 5160.195350694372 4724.3848490497685 4218.777565462913 5010.89804355964 4509.747733806179 4172.533500193804 1.1668614088268126 1.1644259350016972 1.1622749118601936 1.1555954370736943 1.1632683472677212 1.2367055532219677 1.132258099025528 1.011082970398431 1.2009245805520548 1.0808176216192662 1.0 12.026707917322328 -10.980662516502608 0.8194527198565097 0.9805652504971746 1.1580340438667516 0.33920655385475307 0.057506999589641096 0.5363207081692558 0.5157262797484982 0.0664773776920626 0.009851358637497358 1.0455323705931276e-11 10.980662516502608 0.177468793369577 VLDSGAPIKIPVGPETLGR ddPTM_A549_PD325901_60min_R1 2 VLDSGAPIKIPVGPETLGR 19 1 H0YH81;P06576;F8W079 H0YH81 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial 0 ; 109.03 9.059e-10 11375700.0 7407.0 8002.3 8434.8 8743.7 9664.6 10854.9 9355.5 8850.3 9644.9 9700.099999999999 10023.3 False True 8158.953187254798 8676.681905074292 9007.236250572836 9283.778490616516 8985.791837059985 10766.501293330624 9711.528672026036 8673.773823573965 9239.558394043226 9087.634030570573 8790.497642933762 0.9281560064819958 0.9870524124477799 1.0246560111205194 1.056115235760205 1.022216511744726 1.2247885990829281 1.104775755196595 0.9867215914159735 1.0510847928467897 1.0338019984426778 1.0 13.101729125419876 -5.465690218321077 1.6757808661487423 1.043593422685044 0.9122293987071808 0.2788807591598478 0.062206474076153116 0.7790955568682512 2.827636997690987 0.009518490729165056 0.1441263012508551 3.4222346301666746e-06 5.465690218321077 -0.1313640239778633 VLDSPS(ph)RLDEEHR ddPTM_A549_MK2206_60min_R1 2 VLDSPSRLDEEHR 13 1 E7EVB6;O60941-6;O60941;O60941-7;O60941-3;O60941-4 E7EVB6 DTNB Dystrobrevin;Dystrobrevin beta 1 VLDS(0.414)PS(0.586)RLDEEHR;VLDS(0.398)PS(0.602)RLDEEHR 69.485 0.00091668 30164000.0 1976.08 1980.3 2053.93 1982.7200000000003 2217.4 1946.92 1874.8400000000001 1883.76 3137.5 2553.9 3235.8999999999996 True False 2309.593993482483 2081.0888114548147 2345.208158713945 2468.4864890076824 1891.2233973720179 2152.9417821390994 2215.4741596779554 2150.788748773049 2426.86125955796 1976.972216239417 2432.336723703318 0.9495371142388727 0.8555923985254328 0.9641790693943408 1.0148621549607346 0.7775335458046959 0.8851331154763679 0.9108418822476265 0.8842479447082465 0.9977488872769961 0.8127872251295073 1.0 11.248127248636807 -8.769519112271196 24.785758885325443 0.998936985639157 0.9044641275244555 0.0 0.08077034030345678 126.50923384489401 388084.42355367134 0.009853231553971943 0.010580512919350343 1.7001251335169395e-09 8.769519112271196 -0.09447285811470152 VLDSVEAGDT(ph)TPPTKR ddPTM_A549_MK2206_60min_R1 1 VLDSVEAGDTTPPTKR 16 1 Q8IZ21-3 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 VLDSVEAGDT(0.526)T(0.466)PPT(0.008)KR 59.9 0.0026888000000000003 9740800.0 1387.4 1248.1 1817.1 1461.6 1723.2 1493.9 1381.4 1078.1 1814.9 1929.6 1966.1 True False 1621.5592013266657 1311.6229589338757 2074.7921035279237 1819.6920656137181 1469.7195627092372 1651.9835064294373 1632.3824988687713 1230.9239765427792 1403.8280477997569 1493.702019834598 1477.863108400475 1.0972323431780608 0.8875131610487761 1.40391359100473 1.2312994723734678 0.9944896481650104 1.1178190300841981 1.1045559562248874 0.832907980141027 0.9499039794823432 1.0107174415168032 1.0 10.529296926285406 -8.091176619900374 9.795054875789658 0.9649478638228279 1.122361595102604 0.2857767965559611 0.12943335721373228 0.48161536936608507 49.15292568338772 0.02054937750749351 0.026545027812620303 8.10631321358847e-09 8.091176619900374 0.1574137312797761 VLDSVEAGDTT(ph)PPTK ddPTM_A549_MK2206_60min_R1 2 VLDSVEAGDTTPPTK 15 0 Q8IZ21-3 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 VLDSVEAGDT(0.03)T(0.968)PPT(0.002)K;VLDSVEAGDT(0.136)T(0.862)PPT(0.002)K 121.24 5.469600000000001e-07 7263500.0 3100.6 4105.3 3523.3999999999996 3367.8 4780.4 4145.3 3379.7 3618.2 5999.4 5560.3 6055.1 True False 3623.905477608088 4314.242234845961 4023.0711009687343 4192.9111511862875 4077.2094925575866 4583.952894572561 3993.7477424546046 4131.090930272778 4640.545479073155 4304.224368203936 4551.451557741576 0.7962087328918568 0.9478827095298543 0.8839094627132486 0.9212250417242284 0.8958042156073595 1.0071408728443354 0.8774668238886622 0.9076425131332431 1.0195748367748831 0.9456816827771943 1.0 12.152111010453382 -6.93811904285274 0.2824358346884138 1.0212232102990138 0.8220030860689359 0.2874076695174561 0.053329294794292666 2.0437472541834776 0.25663314119394837 0.0303939047185339 0.13413438730843963 1.1531371323464758e-07 6.93811904285274 -0.19922012423007784 VLDSVEAGDTT(ph)PPTKR ddPTM_A549_MK2206_60min_R1 1 VLDSVEAGDTTPPTKR 16 1 Q8IZ21-3 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 VLDSVEAGDT(0.159)T(0.803)PPT(0.038)KR 73.809 0.00035393 9652600.0 1714.2 1693.8 1582.4 1819.4 2022.7 1505.5 1388.5 1411.2 2449.3 2574.5 2409.8 True False 2003.5150518337682 1780.0071851952564 1806.808114370473 2265.1530816759705 1725.1635094544886 1664.8110107299794 1640.772476964884 1611.2419216187454 1894.5374607283861 1992.9186619320972 1811.3801529034463 1.106070997091555 0.9826800753790405 0.997475936497568 1.2505122561076842 0.9524027889392728 0.9190842728741769 0.9058134342119755 0.889510641394684 1.0459082582370396 1.1002210986675902 1.0 10.822873639980388 -5.252206443432891 23.292321213489007 1.0067747842088262 1.1060711372795828 0.08175441453609411 0.09768899368095245 969.3423759209778 2445256.886926223 0.01282128689093252 0.2072927796659101 5.594915819519568e-06 5.252206443432891 0.09929635307075668 VLDTADPRT(ph)PR ddPTM_A549_MK2206_60min_R1 2 VLDTADPRTPR 11 1 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2;H3BQ71 Q96BT3 CENPT Centromere protein T 1 VLDTADPRT(1)PR;VLDTADPRT(1)PR 94.12200000000001 0.00011425 40742000.0 1782.58 2258.35 2345.19 2323.57 2435.8999999999996 1882.71 2177.5699999999997 1989.77 3165.8 3545.7000000000003 2997.6 True False 2083.435924103277 2373.290368807243 2677.773206357741 2892.8447543090206 2077.5823368172187 2081.937122558246 2573.206282077366 2271.8259909150593 2448.751354743773 2744.7239074044023 2253.2131904487383 0.9246510418698334 1.0532915300103451 1.188424254619444 1.283875297096453 0.9220531575192218 0.9239858577889907 1.1420163404799257 1.0082605589853724 1.0867819188720853 1.218137688452719 1.0 11.137768107002497 -6.79434136182979 24.999941315045163 1.0312555237430738 1.1137465853825237 0.07058996126111572 0.11644206618664843 308.99409352427097 234782.44287696938 0.015062176544656643 0.028466152396766885 1.6056786698987214e-07 6.79434136182979 0.08249106163944986 VLDTADPRT(ph)PR ddPTM_A549_PD325901_60min_R1 2 VLDTADPRTPR 11 1 Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2;H3BQ71 Q96BT3 CENPT Centromere protein T 1 VLDTADPRT(1)PR;VLDTADPRT(1)PR 83.53 0.00023730000000000002 64320000.0 8450.0 8683.1 8094.9 8606.1 10182.8 9570.2 9024.9 10029.8 9942.099999999999 9462.3 10516.0 True False 9307.837779438776 9414.855310342096 8644.268592588094 9137.679251128791 9467.595256752938 9492.263464189693 9368.34750811477 9829.747770774109 9524.26811158407 8864.848763153776 9222.5986664164 1.009242418119393 1.0208462550393513 0.93729206975749 0.9907922464850566 1.0265648109820371 1.0292395676671113 1.0158034461836778 1.0658327578070388 1.0327098094668463 0.9612094252170648 1.0 13.17095760309432 -6.734333147973324 8.412679762170216 1.0213849598097788 0.9879528530766378 0.16893627475596662 0.030764478764791797 0.25025903250895465 66.45069505914577 0.0038336342895044554 0.007902826951929611 1.8436006476845652e-07 6.734333147973324 -0.03343210673314101 VLDTSSLTQS(ph)APAS(ph)PTNK ddPTM_A549_MK2206_60min_R1 1 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 2 VLDTSSLT(0.014)QS(0.986)APAS(0.935)PT(0.065)NK 120.63 3.4889999999999995e-10 5293000.0 1031.5 1103.6 1108.0 1193.7 1739.3 1253.8 951.52 1443.8 1520.4 2140.8 2359.2 True False 1205.5919822462558 1159.7685261432778 1265.1310608711356 1486.15655358723 1483.451274036777 1386.4762837949183 1124.3988673256224 1648.4630714520595 1176.0318275798954 1657.1917931498283 1773.3455293924017 0.6798404271835989 0.6540003101034954 0.7134148646736687 0.8380524432237576 0.8365269201344249 0.7818421513544314 0.6340551509501215 0.9295780456372028 0.6631712816750592 0.9345002232687439 1.0 10.79225795173512 -10.915870026639803 1.026458324338073 1.0086172390600048 0.7449435789862399 0.4674094408592008 0.0896093776808048 0.3648758806793959 0.6445206297763676 0.07354107201047062 0.015218332559908246 1.2137520414197094e-11 10.915870026639803 -0.2636736600737649 VLDTSSLTQS(ph)APAS(ph)PTNK ddPTM_A549_PD325901_60min_R1 2 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 2 VLDTSSLT(0.036)QS(0.964)APAS(0.654)PT(0.345)NK;VLDTS(0.002)S(0.023)LT(0.056)QS(0.918)APAS(0.986)PT(0.014)NK 153.75 2.9381e-18 22401900.0 4758.4 4257.4 5553.0 4375.2 6605.0 5159.799999999999 5888.4 6200.1 5660.9 5909.4 6247.8 True False 5241.469265051061 4616.186039346601 5929.85997290166 4645.446167199857 6141.087586012997 5117.780299526236 6112.486284256119 6076.434141615643 5422.992059310031 5536.279475495484 5479.36020806736 0.9565841751622666 0.8424680736539474 1.082217585215701 0.8478081364974479 1.1207672707794176 0.934010560574433 1.115547445713935 1.1089678193941694 0.9897126404147811 1.0103879404285778 1.0 12.41979173285987 -5.756457605013976 24.999831287489474 1.0094980869525192 0.899526132875745 0.23119627324688918 0.08401590784947954 130.69450082377915 655835.6501247596 0.010405180702245886 0.03788968871702211 1.7520334559730192e-06 5.756457605013976 -0.10997195407677418 VLDTSSLTQS(ph)APASPT(ph)NK ddPTM_A549_MK2206_60min_R1 1 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 2 VLDTSS(0.001)LT(0.04)QS(0.959)APAS(0.036)PT(0.964)NK 126.63 3.7429000000000005e-11 4008900.0 2557.9 2727.5 2584.5 2314.4 3459.8 2780.4 2143.1 2416.6 3863.8 4121.5 3718.8 True False 2989.610985349199 2866.3180999055753 2951.0209628352422 2881.428103897363 2950.868003169348 3074.6200825198516 2532.473529264271 2759.160450527111 2988.6554692207296 3190.4502874939344 2795.3193263413295 1.0695060693699596 1.025399163843357 1.055700840697046 1.0308046299915 1.0556461207713286 1.0999172987309778 0.9059693128437365 0.9870644918906116 1.0691642421878325 1.141354498367732 1.0 11.448797384980756 VLDTSSLTQS(ph)APASPTNK ddPTM_A549_PD325901_60min_R1 1 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 VLDTSSLTQS(0.997)APAS(0.003)PTNK 229.68 2.6162999999999996e-64 47163000.0 1038.2 1061.0 1573.5 1183.9 1471.3 1612.8 1954.4 1842.8 1781.9 1807.1 1530.5 True False 1143.5972997175545 1150.4141935798245 1680.2871722241612 1257.026814168017 1367.9609637094507 1599.6658915221358 2028.7757614887173 1806.0439083513659 1707.0129397241678 1692.999397598384 1342.2582026388648 0.8519950166586837 0.8570736921690052 1.2518360244852558 0.9365014955369363 1.0191488947655931 1.19177211089283 1.5114646030846872 1.3455264455085494 1.2717470724844142 1.2613067994443736 1.0 10.390446506003267 -7.210732869794893 4.9137860587008015 1.1853670150822615 0.9862132786390673 0.3824762046628649 0.16173193740483452 0.27712408446391595 15.090709657485641 0.028408131045359556 0.04939166845490832 6.155553782653941e-08 7.210732869794893 -0.19915373644319423 VLDTSSLTQSAPAS(ph)PTNK ddPTM_A549_MK2206_60min_R1 4 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 VLDTSSLTQSAPAS(1)PTNK;VLDTSSLTQS(0.003)APAS(0.976)PT(0.021)NK;VLDTSSLTQS(0.144)APAS(0.844)PT(0.012)NK;VLDTSSLTQS(0.001)APAS(0.981)PT(0.018)NK 278.15 8.234699999999998e-116 72988600.0 6251.599999999999 6527.900000000001 7245.41 7051.8099999999995 9451.1 7287.6 6836.5 6784.7 10210.2 9887.3 10190.9 True False 7306.717243054475 6860.142227084727 8272.918086413654 8779.503766567783 8060.855709796463 8058.768994882628 8078.603556910643 7746.4520022723245 7897.606002339016 7653.752062971921 7660.218275468389 0.953852355154684 0.895554405943512 1.0799846412872356 1.1461166576263069 1.0523010467744898 1.0520286374463488 1.0546179320740925 1.0112573459009773 1.0309896817993887 0.9991558709864475 1.0 12.903169786531535 -5.7561884239456225 24.99984232078952 1.0343842453591756 0.9247033570838579 0.5326500287717904 0.04293155290824092 86.32396177748952 410975.36884690484 0.006519822417275249 0.0238172233811545 1.7531197244923885e-06 5.7561884239456225 -0.10968088827531774 VLDTSSLTQSAPAS(ph)PTNK ddPTM_A549_PD325901_60min_R1 3 VLDTSSLTQSAPASPTNK 18 0 Q8N122;Q8N122-3;I3L436 Q8N122 RPTOR Regulatory-associated protein of mTOR 1 VLDTSSLTQSAPAS(0.998)PT(0.002)NK;VLDTSSLTQS(0.001)APAS(0.979)PT(0.02)NK;VLDTSSLTQSAPAS(0.98)PT(0.02)NK 345.77 1.0145999999999994e-219 57292400.0 11726.800000000001 9419.5 9739.0 10165.5 12237.9 11660.0 10902.8 11620.5 11386.099999999999 11955.000000000002 12419.5 True False 12917.29610318611 10213.314322738124 10399.947105364543 10793.39984747443 11378.352122463051 11565.044825860678 11317.712020241086 11388.720011394103 10907.581813229335 11200.159259746933 10891.980233697079 1.185945606403435 0.9376912281883022 0.954826108955807 0.9909492687181284 1.0446541288480546 1.061794510981695 1.0390867204502354 1.0456060116745562 1.0014323914657859 1.0282941227800273 1.0 13.410978648904512 -8.835530333328048 11.211638704428093 1.0006548132529365 1.027016522363221 0.014299109410953581 0.06217749343576006 1.4861012310316102 217.94019805482216 0.010296999019339755 0.010956535244151954 1.4603927446474133e-09 8.835530333328048 0.02636170911028457 VLEDDPEAT(ph)YTTSGGK ddPTM_A549_MK2206_60min_R1 2 VLEDDPEATYTTSGGK 16 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.996)YT(0.003)TSGGK;VLEDDPEAT(0.942)YT(0.047)T(0.009)S(0.002)GGK 139.6 4.5951e-11 6937800.0 2882.6000000000004 2778.65 2493.82 2491.6 3766.2000000000003 3009.8999999999996 2721.4 2948.8 3700.5 3971.7 3921.6 True False 3369.1124071963727 2920.0714164262586 2847.4811752903015 3102.042111852175 3212.196969054973 3328.40562019008 3215.8431536278254 3366.801430321256 2862.342658484215 3074.4902115345517 2947.758489346067 1.1429404475886282 0.9906074147458563 0.9659818419934357 1.052339302240576 1.089708326060175 1.1291310438829254 1.0909452606957737 1.1421564699040692 0.9710234637028216 1.0429925730505143 1.0 11.525402613540223 -8.788984780494262 24.97560959879429 0.9863166203554073 1.0710048044615232 0.21416637859654497 0.057079417657718956 187.77421851363422 170255.4088493342 0.010024301966070327 0.010672916776438715 1.6256057228158021e-09 8.788984780494262 0.0846881841061159 VLEDDPEAT(ph)YTTSGGK ddPTM_A549_PD325901_60min_R1 3 VLEDDPEATYTTSGGK 16 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.984)YT(0.011)T(0.002)S(0.002)GGK;VLEDDPEAT(0.999)YT(0.001)TSGGK;VLEDDPEAT(0.918)YT(0.068)T(0.012)S(0.002)GGK 232.93 1.4464e-55 27002600.0 9348.7 10243.4 9785.8 10151.2 12122.7 10671.4 11139.400000000001 10043.2 10597.3 11554.3 12313.2 True False 10297.773141850805 11106.647267215423 10449.923234795804 10778.216568952095 11271.24337304463 10584.495656491392 11563.315962713568 9842.880497262022 10151.932334103438 10824.759526130825 10798.754459805856 0.9536074905842374 1.0285118814911087 0.9676970870753252 0.9980981241003113 1.0437540195026593 0.9801589336888843 1.0708008970621097 0.9114829431392573 0.940102154548475 1.0024081542386913 1.0 13.398577299504161 -8.270746388970302 24.992624887146192 0.9664071926999811 1.005619437377069 0.21028246174164567 0.03955234148169705 876.2271819850614 2352978.5354191177 0.00650810910887135 0.00792183442899253 5.361096332265231e-09 8.270746388970302 0.03921224467708795 VLEDDPEATY(ph)TTSGGK ddPTM_A549_MK2206_60min_R1 2 VLEDDPEATYTTSGGK 16 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.114)Y(0.645)T(0.195)T(0.038)S(0.008)GGK;VLEDDPEAT(0.107)Y(0.69)T(0.175)T(0.027)SGGK 180.2 4.0434e-29 19493600.0 4377.700000000001 4818.8 4337.2 3196.7 4779.0 3781.0 3812.9 4279.6 5757.5 5350.6 5683.6 True False 5116.548735510847 5064.056337241054 4952.280177987626 3979.8916435053175 4076.015430703021 4181.102910375329 4505.654575022975 4886.246405725327 4453.435442838233 4141.895743846913 4272.205260619978 1.1976364484810216 1.1853494924319634 1.1591859182507904 0.9315778153711088 0.9540776208190695 0.9786755680761865 1.0546437495770322 1.1437293172136211 1.0424207572348607 0.9694983015038575 1.0 12.06076524848638 -6.120126682411892 6.059559352355728 1.0194857925871643 1.1868171969551151 0.6525576954602388 0.055576286505679 0.11550950790217097 5.260160572489581 0.008078426868630209 0.02180395590651004 7.583563324705879e-07 6.120126682411892 0.1673314043679508 VLEDDPEATY(ph)TTSGGK ddPTM_A549_PD325901_60min_R1 1 VLEDDPEATYTTSGGK 16 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.139)Y(0.617)T(0.234)T(0.01)S(0.001)GGK 166.7 2.2535e-21 14150000.0 5584.5 6470.4 5639.5 5107.6 7322.6 6176.5 6645.5 6574.2 6482.0 6518.8 7455.9 True False 6151.434328908385 7015.683315870779 6022.230383068414 5423.084851798775 6808.285837598605 6126.200631812046 6898.3981390571325 6443.072423639869 6209.584081762199 6107.20185549463 6538.871566844237 0.9407486086895517 1.072919577048163 0.9209892443222948 0.8293609679224885 1.041201951743547 0.9368895793695252 1.0549829689324222 0.9853492850830525 0.9496415426246156 0.9339840663734067 1.0 12.67482597155014 VLEDDPEATY(ph)TTSGGKIPIR ddPTM_A549_MK2206_60min_R1 2 VLEDDPEATYTTSGGKIPIR 20 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.161)Y(0.646)T(0.161)T(0.031)S(0.001)GGKIPIR;VLEDDPEAT(0.003)Y(0.993)T(0.003)TSGGKIPIR 175.33 1.1008e-34 10689800.0 4850.200000000001 5791.5 5425.9 4785.5 7033.7 4872.7 4384.5 3901.0 7880.1 7304.700000000001 8175.0 True False 5668.79518399495 6086.262612503437 6195.374208646832 5957.947714829257 5999.052047486049 5388.325879763519 5181.106896112736 4453.978696311459 6095.269931933917 5654.563196665521 6144.921881477989 0.9225170463243514 0.990454025273883 1.0082104098541784 0.9695725722385001 0.9762617268688768 0.8768745939643269 0.8431526056872453 0.7248226718286904 0.9919198403980151 0.9202009896512263 1.0 12.585178954833552 -8.951092826024851 24.999985052979575 0.9964362656714304 0.9161520879328001 0.06705091623392989 0.07966181437843355 149.35095356479536 76344.14443978619 0.014364041647610026 0.015288951732685949 1.1191986405830231e-09 8.951092826024851 -0.08028417773863028 VLEDDPEATY(ph)TTSGGKIPIR ddPTM_A549_PD325901_60min_R1 2 VLEDDPEATYTTSGGKIPIR 20 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.01)Y(0.948)T(0.034)T(0.008)SGGKIPIR;VLEDDPEATY(0.989)T(0.008)T(0.002)SGGKIPIR 159.95 5.7678999999999994e-27 19109100.0 7576.299999999999 7691.1 7594.4 7955.3 9528.3 10484.0 9309.400000000001 10362.099999999999 9485.3 9919.2 10857.8 True False 8345.440398622724 8339.255988917794 8109.8016528370945 8446.680813202824 8859.065078850508 10398.621779959118 9663.674311299148 10155.419786589808 9086.665827019278 9292.900019178742 9522.359433265114 0.8764046828004647 0.8757552208946973 0.8516588467041651 0.8870365451334942 0.9303434869201141 1.0920215575598728 1.014840321773653 1.066481459533357 0.9542452047416109 0.9759030925376766 1.0 13.217103370897473 -6.94582970289174 3.8506357578264234 0.995909725988131 0.8721651477743516 0.7285063959314649 0.04023007817954415 0.11270126919747785 3.472966971989792 0.006580032472422331 0.012706331314780222 1.1328444911940523e-07 6.94582970289174 -0.12374457821377938 VLEDDPEATYTT(ph)SGGKIPIR ddPTM_A549_PD325901_60min_R1 1 VLEDDPEATYTTSGGKIPIR 20 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.088)Y(0.003)T(0.056)T(0.486)S(0.367)GGKIPIR 75.797 0.00013814 5851900.0 2340.5 2626.2 3145.4 2805.7 3006.1 3818.0 2699.6 2808.0 3102.2 3505.4 2841.6 True False 2578.105837014965 2847.519090649703 3358.8657588267397 2979.001716792979 2794.9619064820076 3786.907473853865 2802.3347552778023 2751.992237166615 2971.8253221910963 3284.068445764692 2492.1012143865382 1.034510886689487 1.1426177533285522 1.3478047117173635 1.1953774989537485 1.1215282470660095 1.519564073879744 1.124486733965832 1.1042859019046913 1.1924978427983504 1.3177909576088813 1.0 11.283146947939018 -10.541763374368728 0.5314693728439266 0.9718601620412525 1.2116116197413653 0.0 0.15723778541860148 1.3419075911295322 0.5687955448673568 0.1588334651642797 0.029699797322003327 2.872345154884791e-11 10.541763374368728 0.23975145770011286 VLEDDPEATYTTS(ph)GGKIPIR ddPTM_A549_PD325901_60min_R1 1 VLEDDPEATYTTSGGKIPIR 20 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VLEDDPEAT(0.033)Y(0.026)T(0.058)T(0.239)S(0.644)GGKIPIR 59.538999999999994 0.00083105 4496400.0 2883.8 3022.6 2469.2 3122.3 4134.5 3361.0 2891.0 3179.8 3802.5 3578.7 3832.0 True False 3176.5612530586436 3277.3251098156215 2636.774760505813 3315.1573797422097 3844.106983250677 3333.6291303359994 3001.0185870159025 3116.3763944951565 3642.6941485499465 3352.7402712552357 3360.688293049413 0.945211509091283 0.9751946101617923 0.7845936696834395 0.9864519082589807 1.1438451436275932 0.9919483271419793 0.8929773681250414 0.9273030173433391 1.083913124607176 0.9976350017909679 1.0 11.714541022212455 -6.509605932809822 24.892494334452937 1.024466362397644 0.905103287025533 0.22861897631270256 0.07858710311057408 576.117135983999 1080477.8935423733 0.01162444830413164 0.025936632475292494 3.0931007564312185e-07 6.509605932809822 -0.119363075372111 VLEDSDLKK ddPTM_A549_PD325901_60min_R1 1 VLEDSDLKK 9 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 61.65 0.007614 3230700.0 2121.2 2318.7 2301.8 2196.1 2597.1 2842.0 2048.9 2437.2 2896.4 2685.4 2525.4 False True 2336.5426624550933 2514.104986478357 2458.0139898478383 2331.748109295028 2414.688655508608 2818.8556942620967 2126.872010701099 2388.5881340535875 2774.6743805023198 2515.84338570677 2214.7918098295904 1.054971691734254 1.1351428045382723 1.1098171751127082 1.0528069044441863 1.0902553661214767 1.2727407071633445 0.960303357300542 1.0784707273399974 1.2527924151551777 1.1359277086636612 1.0 11.112955376651124 VLEEGS(ph)VEAR ddPTM_A549_MK2206_60min_R1 2 VLEEGSVEAR 10 0 Q96CT7 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 1 VLEEGS(1)VEAR;VLEEGS(1)VEAR 112.13 0.00014233 6823000.0 961.51 1216.25 938.29 842.4200000000001 1245.67 1180.29 821.3499999999999 1106.25 1251.03 1340.7 1412.38 True False 1123.7893813374676 1278.1519299762256 1071.3536309609908 1048.8129378176704 1062.4335931290714 1305.1875043869074 970.578663273394 1263.0643252485384 967.6737024843964 1037.8349388434103 1061.647066295032 1.0585338734644667 1.2039329929453475 1.0091429298625891 0.9879111157701869 1.0007408552795085 1.2293986823151977 0.914219700771697 1.189721485932626 0.9114834234520266 0.97757058046162 1.0 10.05208852130164 -8.787793311591818 24.998388391671707 0.9582005028029779 1.070871766190268 0.20884728659913798 0.09609163602040102 232.56404886426094 220600.76298182594 0.01595982372108804 0.016993095491445218 1.6300716279198808e-09 8.787793311591818 0.11267126338729017 VLEEGS(ph)VEAR ddPTM_A549_PD325901_60min_R1 2 VLEEGSVEAR 10 0 Q96CT7 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 1 VLEEGS(1)VEAR;VLEEGS(1)VEAR 116.55 8.008e-05 7966700.0 1075.9 1276.92 1050.37 872.78 1225.8 1376.4 978.22 1210.02 804.26 1143.0 1104.02 True False 1185.1245759642823 1384.5305297511302 1121.65442458792 926.6896383728039 1139.7040367804282 1365.1910547439652 1015.4466974025239 1185.8852018576738 770.4597490894879 1070.8307849343992 968.2325389593976 1.2240082090589397 1.4299566209984498 1.158455618309845 0.9570940875099676 1.1770974336447302 1.4099826227810899 1.0487632428609241 1.224793790892627 0.7957383356662803 1.1059644680866318 1.0 9.919209768797435 -8.751208754505546 24.95765021168105 0.9035431023871345 1.202393518165857 0.31042962937538365 0.14896367740011054 130.28275979552805 317825.06067244563 0.024973333634828485 0.028161628746234475 1.773336877268189e-09 8.751208754505546 0.2988504157787224 VLEGMEVVR ddPTM_A549_PD325901_60min_R1 1 VLEGMEVVR 9 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 71.692 0.0082772 3312500.0 938.42 667.34 809.91 846.95 880.15 1185.5 845.39 595.89 1014.2 1281.7 985.22 False True 1033.6877075717084 723.579083829934 864.8753629844739 899.2641779369894 818.3313003526633 1175.845681051273 877.5617790651584 584.0045064833387 971.5767009755047 1200.7732432637097 864.0441858241502 1.1963366278377852 0.8374329643104577 1.0009619614065581 1.040761795161257 0.9470942733931083 1.3608629053266732 1.0156445624688912 0.6758965757362262 1.1244525649446815 1.389712775068763 1.0 9.754961281144256 VLEKEEEEDDDEDEDEEDDVS(ph)EGSEVPESDRPAGAQHHQLNGER ddPTM_A549_MK2206_60min_R1 1 VLEKEEEEDDDEDEDEEDDVSEGSEVPESDRPAGAQHHQLNGER 44 2 Q6SPF0;E9PIW9 Q6SPF0 SAMD1 Atherin 1 VLEKEEEEDDDEDEDEEDDVS(0.333)EGS(0.333)EVPES(0.333)DRPAGAQHHQLNGER 53.526 0.00076125 2612900.0 460.26 419.52 414.19 339.43 396.37 266.9 221.82 462.32 531.76 497.58 577.74 True False 537.9406357233754 440.87177608520136 472.9283701283535 422.5903652375919 338.06449806816386 295.1431808461186 262.12182271541263 527.8552757956198 411.31720904622796 385.1763324156815 434.27121318716735 1.2387204571432815 1.0151991720786457 1.0890161626359638 0.9731024125134883 0.7784639824202688 0.6796287017968061 0.6035901408054885 1.215496813435153 0.94714362029093 0.8869488023137136 1.0 8.762452512889881 -5.303509575764366 1.1310868943027277 0.9331119262898906 1.342942970497995 0.26077948534932727 0.165365614339213 1.9402320528146362 2.0833960837553565 0.025622375176804678 0.9235854608259806 4.971534118627095e-06 5.303509575764366 0.40983104420810434 VLEKS(ph)PGK ddPTM_A549_PD325901_60min_R1 1 VLEKSPGK 8 1 P51608;P51608-2;I6LM39;A0A087X1U4 P51608 MECP2 Methyl-CpG-binding protein 2 1 VLEKS(1)PGK 44.765 0.015688 11285000.0 2967.1 2479.3 2486.7 2612.6 3553.9 2890.9 2690.1 3656.4 2898.2 3140.6 3266.8 True False 3268.317807736425 2688.239312104107 2655.4624157418616 2773.9743683548973 3304.286324289415 2867.357468874841 2792.4732275792035 3583.4702336096902 2776.398732761988 2942.301980021852 2865.004309951415 1.1407723878055351 0.9383020132872659 0.9268615780151804 0.9682269442735807 1.1533268249587552 1.0008213456835833 0.9746837789666566 1.2507730690535885 0.9690731434917353 1.0269799489662017 1.0 11.484321593955212 -5.2407492848379436 22.927106185864893 1.0055780772176364 1.140772803776706 0.09958133363395438 0.09384057817247617 2290.0173029496145 2537489.4737284984 0.012429101403675716 0.6271501248970528 5.744479913046295e-06 5.2407492848379436 0.1351947265590696 VLELDNVK ddPTM_A549_PD325901_60min_R1 1 VLELDNVK 8 0 C9J9C1;B3KQV6;P30153 C9J9C1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform 0 107.47 0.0050581 2355900.0 1768.9 1417.7 1553.0 1585.9 1876.0 1738.3 1393.9 1296.6 1610.9 1514.1 1617.8 False True 1948.4774258046448 1537.1745544185833 1658.3959189476468 1683.8574411597756 1744.2362318486564 1724.1438611315286 1446.9456272713473 1270.738295836977 1543.1994750556496 1418.4994676020774 1418.8208560791609 1.3733075725917667 1.0834169429017888 1.168855047374014 1.1868005985005252 1.2293562110926142 1.215194894932763 1.019822637277766 0.8956298396603765 1.0876633709206973 0.9997734819898464 1.0 10.470476727223488 -7.762539514185329 24.997579280982585 1.027725626644348 1.2017828587374269 0.6272423852756452 0.0788176416227273 17.207369520854147 390994.81362896576 0.012114894003683856 0.017257310705671866 1.7276687818027938e-08 7.762539514185329 0.17405723209307888 VLENAEGAR ddPTM_A549_MK2206_60min_R1 2 VLENAEGAR 9 0 P38646;D6RJI2;A0A3B3ITI4;D6RA73 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 90.10799999999999 0.002967 8435900.0 2682.0 3253.9 2805.4 2290.3 3377.3999999999996 2655.1 2901.3 2548.9 3827.8 4062.1 4730.6 False True 3134.6560313955015 3419.509611469384 3203.2479044836496 2851.423602815476 2880.5889340147273 2936.060919687259 3428.4286549645067 2910.2143806788695 2960.8094117405426 3144.468788749026 3555.8614620819326 0.8815461639386203 0.9616543411304006 0.9008359686229648 0.8018938963797501 0.8100959401067785 0.8256960938990618 0.9641626063117726 0.8184273801755366 0.8326560084843713 0.8843057645187226 1.0 11.795983401894789 -10.818787915870967 1.0167717403371062 1.0015876900775755 0.865009662429004 0.08157779584755676 0.06368373587836036 0.42070341186102633 0.7576086182268067 0.041965689067836445 0.009925240651297263 1.5177913874174123e-11 10.818787915870967 -0.13657802764857152 VLES(ph)PENK ddPTM_A549_MK2206_60min_R1 2 VLESPENK 8 0 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 VLES(1)PENK;VLES(1)PENK 109.44 0.0016722999999999998 27421000.0 7156.8 9634.400000000001 7223.1 7343.200000000001 9672.7 7311.8 7459.3 7294.799999999999 11468.8 10369.7 12472.7 True False 8364.692873039265 10124.749808150416 8247.444192940702 9142.284329648779 8249.858643348216 8085.529822819969 8814.558255256865 8328.860239388056 8871.135111910224 8027.177567930577 9375.384360992115 0.8921973277001842 1.079929037392447 0.8796913145508573 0.9751370160019052 0.87994884536928 0.862421156455323 0.9401810012111437 0.8883753368066378 0.9462156185105427 0.8561971711078874 1.0 13.194662122286543 -9.927471781214516 0.9347671364096038 0.9934407355719023 0.9278178748220849 0.0 0.07155098461914493 0.6356366795186466 1.1330409422502918 0.02081211238138841 0.011133060232300044 1.1817570960822158e-10 9.927471781214516 -0.06562286074981738 VLES(ph)PENK ddPTM_A549_PD325901_60min_R1 2 VLESPENK 8 0 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 VLES(1)PENK;VLES(1)PENK 160.53 0.00024528 58926000.0 13561.5 12456.6 13077.6 12651.3 15099.5 12775.5 12918.6 12607.0 13141.0 13732.5 14878.2 True False 14938.253496551359 13506.361398441495 13965.124577997252 13432.742067813026 14038.963210447127 12671.460563703518 13410.224392329163 12355.543494999829 12588.729469058477 12865.427606396895 13048.275720680525 1.1448450213904786 1.0351069894265752 1.0702659015599734 1.0294649159293248 1.0759247820151776 0.9711214596439142 1.027739195537919 0.9469100561246749 0.9647810744147824 0.985986798700626 1.0 13.6715715523538 -5.799651678697491 0.4704699717441594 0.9805403072944001 1.1608020147652292 0.6462446890882929 0.0329995949922187 1.3973453450914617 0.2802093049405023 0.007024496084235677 0.12653861715685724 1.5861648491989014e-06 5.799651678697491 0.18026170747082904 VLES(ph)PR ddPTM_A549_MK2206_60min_R1 2 VLESPR 6 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 VLES(1)PR;VLES(1)PR 80.229 0.042979 109381000.0 4346.5 5104.0 4539.799999999999 4711.0 6328.2 5138.0 3787.8 4197.7 6742.1 6452.799999999999 6373.700000000001 True False 5080.082938277609 5363.771799053364 5183.61190446099 5865.195211484824 5397.330162915847 5681.699749671629 4475.994229922639 4792.7368299171 5215.025114921342 4995.107998335769 4790.9343848289045 1.0603532693673139 1.1195669504550971 1.0819626169115462 1.2242278312259298 1.1265715055516459 1.1859272729059795 0.9342633128302563 1.0003762199486395 1.088519419392462 1.0426166582772258 1.0 12.226091339557941 -7.7447815258676735 24.999996767778313 1.0317646338639155 1.1340071433589904 0.523952324554949 0.05565514657435983 186.83857821282368 280405.51380689256 0.009200313054850195 0.013625391633719995 1.7997760742946812e-08 7.7447815258676735 0.10224250949507496 VLES(ph)PR ddPTM_A549_PD325901_60min_R1 2 VLESPR 6 0 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 VLES(1)PR;VLES(1)PR 72.789 0.047746 134510000.0 8669.8 9060.5 7980.7 7376.799999999999 9429.4 8749.5 7728.8 8380.1 8194.3 9016.6 8754.2 True False 9549.951713630573 9824.060132827512 8522.318293847702 7832.4481820716555 8767.111473664037 8678.246972887482 8022.9237133616425 8212.952331438728 7849.922067445847 8447.290337217419 7677.488897446031 1.2438900063805276 1.279592880439795 1.110039806984639 1.0201835895428222 1.1419243441147113 1.130349661042735 1.04499320292479 1.0697446054491622 1.0224595792065785 1.1002673465314248 1.0 12.906418805557651 -2.000000000059818 0.24456760089976184 0.9987899084039118 2.7015701744353473 0.5733215069048718 0.056292983142808596 16.463450214081504 0.19862876644875463 0.024106624854373395 11.63112135726291 0.009999999998622642 2.000000000059818 1.7027802660314355 VLES(ph)PRK ddPTM_A549_MK2206_60min_R1 4 VLESPRK 7 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 VLES(1)PRK;VLES(1)PRK;VLES(1)PRK;VLES(1)PRK 51.995 0.020243999999999998 54681500.0 4652.3 5298.24 5150.59 4471.29 6440.28 5483.66 4991.73 5392.9400000000005 7155.599999999999 7025.4400000000005 6703.63 True False 5437.494502185415 5567.897785387243 5881.021110841394 5566.756250723833 5492.923343387327 6063.937261441093 5898.662727000298 6157.405760186085 5534.868025145154 5438.388224620014 5038.9336602241365 1.0790962669557254 1.1049754096464088 1.1671162010455602 1.104748866742615 1.0900963802613342 1.2034167683746333 1.1706172624503097 1.221966029993774 1.0984204989313073 1.079273630361331 1.0 12.298902747380614 -9.812927414373739 0.9968939924701421 1.0148402125129414 1.1404347132268045 0.3471816373761819 0.04973962741045596 0.26398617763688004 0.5388361332997326 0.016068589079403364 0.009618909027797782 1.5384117406189242e-10 9.812927414373739 0.12559450071386302 VLES(ph)PRK ddPTM_A549_PD325901_60min_R1 2 VLESPRK 7 1 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 VLES(1)PRK;VLES(1)PRK 58.23 0.013906 101869000.0 4183.3 3994.0 4218.6 3952.0 4576.5 3843.3 4043.5 3895.3999999999996 4375.3 4203.9 4135.3 True False 4607.985536417308 4330.588396944217 4504.899564502604 4196.106064356792 4255.0624280678985 3812.001439042053 4197.3776051881005 3817.703191117818 4191.4213565156015 3938.4650365579355 3626.6843158265233 1.2705780639104636 1.194090254298098 1.2421537614519216 1.1570089092247051 1.1732651804016108 1.051098222805559 1.157359516203581 1.0526703894402127 1.155717176216473 1.0859685303655544 1.0 11.824435456269518 -2.000000015044415 0.01999282179998882 1.886206864905887e-08 2.6384932930752867 0.6140108974233512 0.049704330479094574 1041.0410608166633 1.5601990778939907 75.79432497115394 139.1553405757744 0.009999999653589548 2.000000015044415 2.638493274213218 VLES(ph)PRKGAANASGSSPDAPAK ddPTM_A549_MK2206_60min_R1 1 VLESPRKGAANASGSSPDAPAK 22 2 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 VLES(0.894)PRKGAANAS(0.045)GS(0.049)S(0.011)PDAPAK 58.876999999999995 0.00052697 7343500.0 1373.6 2123.3 2095.8 1861.8 2367.1 1716.2 1893.4 1212.0 2764.6 2767.8 3105.8 True False 1605.430098704272 2231.3669006524315 2393.015954308416 2317.941083579379 2018.90272567841 1897.8071448786388 2237.406271433426 1383.8047115943316 2138.4225141590236 2142.552057679415 2334.5441442806555 0.6876846182743545 0.9558041153854402 1.0250463501283578 0.9928880930600726 0.8647952666153141 0.8129240775026815 0.9583910747264277 0.5927515720722103 0.9159914664273513 0.9177603528844819 1.0 11.18892515365883 -9.628044875424205 1.680304719734042 0.9786908741918978 0.8732867425303947 0.06677876167571728 0.1259034349850194 0.5272802668989811 2.997548378087082 0.029666943197657933 0.02286308611977407 2.3548059504434734e-10 9.628044875424205 -0.10540413166150309 VLES(ph)PRKGAANASGSSPDAPAK ddPTM_A549_PD325901_60min_R1 2 VLESPRKGAANASGSSPDAPAK 22 2 E7EPJ7;O75962-5;O75962-4;O75962 E7EPJ7 TRIO Triple functional domain protein 1 VLES(0.868)PRKGAANAS(0.131)GS(0.001)SPDAPAK;VLES(0.98)PRKGAANAS(0.019)GSSPDAPAK 109.26 6.1343e-11 29369000.0 3642.7 3767.4 4525.6 5239.4 5779.9 5656.3 5770.2 6180.4 5785.799999999999 5932.9 5887.200000000001 True False 4012.5042223859946 4084.892019691449 4832.734430643571 5563.025838459251 5373.939763572522 5610.23696814029 5989.788118574594 6057.127073569994 5542.642946661481 5558.295681484952 5163.111722035622 0.7771484403990419 0.7911686284566644 0.9360119809180121 1.0774560261240982 1.040833523054926 1.0865999556423278 1.160112048904695 1.1731543688506307 1.0735082339989002 1.0765398815142284 1.0 12.33402510086767 -5.941831058919318 2.3641630560000455 1.060861945903361 0.774615432697341 0.8380181467055723 0.0509152576990103 0.1105870157945214 1.2110301545665836 0.009022525122354847 0.037004391521607116 1.1433230023319276e-06 5.941831058919318 -0.28624651320602 VLESLDRS(ph)KDK ddPTM_A549_PD325901_60min_R1 2 VLESLDRSKDK 11 2 Q8WY22 Q8WY22 BRI3BP BRI3-binding protein 1 VLES(0.003)LDRS(0.997)KDK;VLESLDRS(1)KDK 90.70700000000001 6.1269e-05 16912500.0 3284.1 3147.1000000000004 2947.6 3799.0 3919.8999999999996 3475.2 3523.8 3258.7 3556.0 3674.0 3919.1 True False 3617.499414373359 3412.317161748412 3147.6418613587143 4033.6556018450037 3644.57974692087 3446.8991233988895 3657.9001372973503 3193.702672099306 3406.5536863231036 3442.023012991239 3437.075545221806 1.0524934255234444 0.9927966717205816 0.9157907121752212 1.1735719942066907 1.0603723133137224 1.0028581211113443 1.06424781450688 0.929191875499846 0.9911198172699074 1.00143944109006 1.0 11.746965846444771 -8.228831652346866 24.910187444788896 0.990693290670931 1.035837803810715 0.15722445739815316 0.0617865802538738 1097.58955815257 838488.150981487 0.00973378922740288 0.012565756568710307 5.904299069952329e-09 8.228831652346866 0.04514451313978396 VLEVET(ph)TPGSLR ddPTM_A549_MK2206_60min_R1 1 VLEVETTPGSLR 12 0 Q9NXL9;Q9NXL9-4;H0Y6M9 Q9NXL9 MCM9 DNA helicase MCM9 1 VLEVET(0.499)T(0.499)PGS(0.001)LR 54.198 0.022366 699110.0 484.22 585.09 393.22 455.53 769.06 692.13 433.31 544.15 876.16 955.67 843.64 True False 565.9444979576169 614.8685818785524 448.9845088048263 567.134870449519 655.9322927676216 765.3707372012894 512.036818144511 621.2849288894841 677.7111589400164 739.7834832583592 634.1409047205008 0.8924585904248811 0.9696087688107067 0.7080201032020121 0.8943357323708445 1.0343636373003338 1.2069411253933044 0.8074495972944571 0.9797269412281756 1.068707528398155 1.166591648246411 1.0 9.308659629438088 -6.695316096104385 5.0310706892236725 1.025327723646253 0.8587032849588365 0.3448489729813734 0.11346394841863915 0.17389219378788834 8.447524389455598 0.014654060199644606 0.03075785431274409 2.0168978540685726e-07 6.695316096104385 -0.1666244386874165 VLEVETT(ph)PGSLR ddPTM_A549_MK2206_60min_R1 1 VLEVETTPGSLR 12 0 Q9NXL9;Q9NXL9-4;H0Y6M9 Q9NXL9 MCM9 DNA helicase MCM9 1 VLEVET(0.041)T(0.945)PGS(0.015)LR 77.062 0.0011699000000000002 801000.0 707.21 789.24 782.09 853.87 797.68 538.58 374.74 726.08 789.17 860.31 771.71 True False 826.5697583755448 829.4089448834005 893.0021221991932 1063.0681883316806 680.3423286803063 595.5721781195299 442.82540728687104 829.0040635267427 610.4242550455311 665.965373488756 580.0731088875087 1.4249406595675136 1.4298351917641547 1.5394647821407104 1.8326451822089846 1.1728561766724517 1.0267191652130643 0.7633958556295468 1.429137208440235 1.0523229670415704 1.1480714470042843 1.0 9.180090929984821 -6.934538856287062 6.735302613737355 1.0396485406016895 1.5451341934856508 0.6177426262611931 0.17903804549132918 0.09839752107906229 8.087220188570877 0.02464401925976411 0.046793624666726805 1.1626825212521959e-07 6.934538856287062 0.5054856528839613 VLFDNT(ph)GR ddPTM_A549_PD325901_60min_R1 2 VLFDNTGR 8 0 K7EJL1;E7ENJ6;Q9BXS5;Q9BXS5-2 K7EJL1 AP1M1 AP-1 complex subunit mu-1 1 VLFDNT(1)GR;VLFDNT(1)GR 74.533 0.0053067 6742500.0 1966.0700000000002 2601.3 2189.56 2976.8 3111.2 2725.0 2586.4 2570.1 2701.3 2834.0 2355.73 True False 2165.663979055763 2820.5206802631456 2338.1567084938893 3160.6701751966834 2892.6800450573264 2702.8085034708693 2684.8268673323873 2518.837339295555 2587.7737550237935 2655.060756346533 2065.990144202842 1.0482450679315218 1.3652149736423052 1.1317366227785477 1.5298573345402968 1.4001422287391698 1.3082388176221151 1.2995351768090462 1.219191362729101 1.2525586156763977 1.2851275035346221 1.0 11.012617656510946 -10.32233707708234 0.5413445340343037 0.975385995274692 1.304011644944709 0.0 0.14739075545381417 0.7443339420146715 0.3680736270864742 0.11801755345666716 0.028689528347035892 4.76061348996551e-11 10.32233707708234 0.32862564967001695 VLGAGGAGPAPAT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 VLGAGGAGPAPATPSR 16 0 B7WPE2;Q32P44;H7C355;G3V195 B7WPE2 EML3 Echinoderm microtubule-associated protein-like 3 1 VLGAGGAGPAPAT(0.993)PS(0.007)R;VLGAGGAGPAPAT(0.983)PS(0.017)R 158.65 1.0750999999999998e-40 15606000.0 6126.7 7233.3 5777.3 6471.8 6777.5 6035.5 5388.2 6524.3 8410.0 7596.4 8814.7 True False 6748.678073761845 7842.875576268559 6169.382319727135 6871.548387475776 6301.471781105688 5986.348889063651 5593.250899536174 6394.167718285666 8056.556946562803 7116.762007590267 7730.547780987128 0.8729883398896855 1.014530379795038 0.7980524142028335 0.8888824676015824 0.8151391026395081 0.7743757698240684 0.7235258170569073 0.8271299653579248 1.042171547840048 0.9206025509723341 1.0 12.91635493075446 -8.759372145684917 24.999877669722977 1.0199143488946742 0.8386126106559382 0.40772673983918606 0.07693559827353376 29.718783111494403 359400.1418178699 0.012866052487650345 0.014241159376812628 1.7403149634196587e-09 8.759372145684917 -0.18130173823873608 VLGKS(ph)PGK ddPTM_A549_MK2206_60min_R1 1 VLGKSPGK 8 1 B9EGE7;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 VLGKS(1)PGK 57.348 0.0047072 12988000.0 6566.6 6548.0 6367.6 6482.9 8410.3 6224.6 6209.6 6779.8 8456.1 8640.4 8497.3 True False 7674.881542043881 6881.265231230685 7270.621428883609 8071.210791028436 7173.1560110570435 6883.283040444925 7337.803941635677 7740.857412266704 6540.806851616908 6688.527638981585 6387.185896450512 1.2016061011014205 1.077354776076698 1.1383137342102474 1.263656784361603 1.1230542099993224 1.0776706912930316 1.1488320616616847 1.211935512409065 1.0240514301066086 1.0471791094570357 1.0 12.640964724837522 -8.839654994780279 7.218711903320428 1.0107813608554634 1.1517336901585673 0.5361151926618104 0.05411476880037505 0.11156978398859536 8.681039326974375 0.009212446562418503 0.009791156675475898 1.4465884899153078e-09 8.839654994780279 0.14095232930310386 VLGKS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 VLGKSPGK 8 1 B9EGE7;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 VLGKS(1)PGK;VLGKS(1)PGK 58.676 0.0039347 57602000.0 16353.0 16470.3 15904.1 14522.599999999999 20292.9 16637.0 17434.5 16725.6 17115.2 17046.0 17986.3 True False 18013.144521557675 17858.30998352288 16983.44786512252 15419.62801878237 18867.596710704493 16501.513787979766 18097.97943802447 16391.994787020634 16395.907663711256 15969.712650911437 15774.099124549757 1.1419444229003999 1.1321286776833672 1.0766667390019513 0.9775282820927813 1.1961124728410146 1.046114498057002 1.147322537732629 1.0391715341454413 1.0394195912078275 1.012400931731007 1.0 13.945269993273463 -8.748991635213796 1.1588262344437854 1.0130305971723146 1.0994967174847103 0.30739588982764354 0.056137640899707464 0.37774014956840357 1.0024107427455358 0.01134263057073191 0.012081064657842795 1.7824130975202552e-09 8.748991635213796 0.08646612031239576 VLGNPKS(ph)DEMNVK ddPTM_A549_MK2206_60min_R1 2 VLGNPKSDEMNVK 13 1 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VPF3 G8JLA2 MYL6 Myosin light polypeptide 6 1 VLGNPKS(1)DEMNVK;VLGNPKS(1)DEMNVK 54.233999999999995 0.0046178999999999994 12197600.0 5934.0 7421.7 7550.200000000001 7488.5 8737.6 6788.799999999999 7448.1 7077.1 9981.9 9088.6 9247.8 True False 6935.514127628968 7799.432829356257 8620.931891506541 9323.182836171542 7452.310614628731 7507.186309959275 8801.323360232009 8080.300597709768 7721.01558781883 7035.47894769316 6951.316033704243 0.9977267749015212 1.1220080904881642 1.2401870163443838 1.3412111880638191 1.0720719038661686 1.0799661925252473 1.26613770940032 1.1624130680480524 1.1107271702771981 1.0121074791565863 1.0 12.76307042157178 -9.785636503644454 0.7164321587961666 1.0087239908593004 1.1654471655745449 0.27810633501943727 0.09267302379965334 0.5871174576438196 0.6322972437031628 0.04208819904146545 0.021099059731592013 1.6381870797166238e-10 9.785636503644454 0.15672317471524444 VLGNPKS(ph)DEMNVK ddPTM_A549_PD325901_60min_R1 2 VLGNPKSDEMNVK 13 1 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VPF3 G8JLA2 MYL6 Myosin light polypeptide 6 1 VLGNPKS(1)DEMNVK;VLGNPKS(1)DEMNVK 48.216 0.0074938 10960100.0 6676.9 6758.7 6454.5 7089.6 7153.4 7445.4 7273.6 7663.599999999999 8045.200000000001 7791.200000000001 8532.7 True False 7354.733972726005 7328.279368659711 6892.541184061549 7527.508490350182 6650.969861890287 7384.767130914506 7550.40082826664 7510.7434860221065 7707.0882219366285 7299.262302345486 7483.231993241837 0.9828285397764123 0.9792933555017317 0.9210647471956308 1.0059167612534707 0.8887830643092219 0.9868419337505165 1.0089759124246667 1.0036764185321416 1.02991437775776 0.9754157440177593 1.0 12.869445786533593 -7.516630965369174 12.808819161373481 1.012523625593891 0.955778630107898 0.32161979911886496 0.03221952252052601 0.35838374158360625 726.2911211706748 0.0043438957389065275 0.0066330882174165644 3.043470066119542e-08 7.516630965369174 -0.05674499548599299 VLGS(ph)EGEEEDEALS(ph)PAK ddPTM_A549_MK2206_60min_R1 4 VLGSEGEEEDEALSPAK 17 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 2 VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK 140.81 4.3742e-16 20726020.0 8217.76 9171.81 8288.11 8585.69 12382.449999999999 10140.079999999998 8933.31 7859.94 13284.029999999999 12814.33 13275.349999999999 True False 9604.71698305768 9638.615953032064 9463.488625376049 10689.184435426278 10561.008007932325 11213.096535159646 10556.37679236238 8974.110565056719 10275.218415236883 9919.563953061306 9978.71421397906 0.9625204988436836 0.965917626895201 0.9483675373846023 1.0711985739056369 1.0583535895974991 1.1237015405703628 1.0578894801470595 0.8993253411832355 1.0297136680036847 0.9940723564530097 1.0 13.284638216795587 -6.238224674915735 24.508927097377377 1.0233128862679823 0.9596334506019232 0.2485234121565184 0.0537514843467583 776.1338938324029 819401.3527964074 0.007704639633189667 0.020365439523424535 5.777970565242389e-07 6.238224674915735 -0.06367943566605916 VLGS(ph)EGEEEDEALSPAK ddPTM_A549_MK2206_60min_R1 4 VLGSEGEEEDEALSPAK 17 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK 318.18 2.108299999999999e-172 108015400.0 9311.32 9493.62 8809.84 8217.230000000001 12097.469999999998 10408.289999999999 8954.44 10077.21 13569.8 13738.9 14461.900000000001 True False 10882.843176082608 9976.80470747042 10059.20778457126 10230.451718885472 10317.948188421606 11509.688339336262 10581.34583985123 11505.685377661304 10496.261966517794 10635.27294791955 10870.611101865032 1.001125242555635 0.9177777232559388 0.9253580769571857 0.9411110031459289 0.9491599038669861 1.0587894490459313 0.9733901563303857 1.0584212120041085 0.9655631931048465 0.9783509729360932 1.0 13.408145424684566 -7.034699967149495 24.99212799805207 0.9938340154858405 0.9430951563844255 0.37578056499885004 0.03594522755266929 547.6528377829618 394437.96795572515 0.005188835516015506 0.00898992403145603 9.232090069146838e-08 7.034699967149495 -0.05073885910141496 VLGS(ph)EGEEEDEALSPAK ddPTM_A549_PD325901_60min_R1 4 VLGSEGEEEDEALSPAK 17 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK 348.92 1.9706999999999995e-219 231076700.0 31007.899999999998 29241.7 29932.7 30413.8 35654.200000000004 33159.8 31020.6 32202.199999999997 33250.2 35264.7 34784.5 True False 34155.79918119047 31706.00068275508 31964.11302194736 32292.391351248618 33149.971992312574 32889.75758289665 32201.10590812366 31559.901858862817 31852.809724685198 33038.08082368865 30506.227017113077 1.119633678790566 1.0393288119494084 1.047789784164933 1.0585508110568231 1.0866624697218845 1.0781325912393718 1.0555584566409935 1.0345396643497953 1.0441412406331576 1.082994655653591 1.0 14.896816139266233 -10.073813576970778 0.2851797778954906 0.9801036978218801 1.0755030207091845 0.0 0.032402301113891474 1.4966396043396073 0.22267900452540784 0.04936298228682208 0.013956913547748305 8.436968410387788e-11 10.073813576970778 0.09539932288730435 VLGSEGEEEDEALS(ph)PAK ddPTM_A549_MK2206_60min_R1 2 VLGSEGEEEDEALSPAK 17 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK 259.53 1.0407999999999999e-86 189308000.0 6540.1 7262.6 6409.299999999999 5834.700000000001 8447.6 6811.1 6729.7 7133.0 9210.0 9277.9 9765.1 True False 7643.908989906677 7632.235318927306 7318.2351159218115 7264.201761929633 7204.969230468057 7531.8460811577315 7952.399379352236 8144.1245938963375 7123.949705347827 7182.015946218603 7340.156166950554 1.0413823379295097 1.0397919533772122 0.9970135443265576 0.9896522085779442 0.9815825530945536 1.0261152364945956 1.0834101071525344 1.109530152855016 0.970544705496021 0.9784554691841592 1.0 12.841595042402016 VLGSEGEEEDEALS(ph)PAK ddPTM_A549_PD325901_60min_R1 4 VLGSEGEEEDEALSPAK 17 0 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK 285.94 5.690699999999999e-116 367034000.0 21078.5 20822.600000000002 21803.399999999998 21405.0 25345.0 21058.4 21032.3 22320.1 23198.4 21466.0 23833.0 True False 23218.373802828442 22577.393578921055 23283.109838495246 22727.1382357179 23564.854635503303 20886.907372290276 21832.695685816176 21874.90809572027 22223.451922609092 20110.63309658952 20901.692089834734 1.1108370414718909 1.0801706140289606 1.1139342086958923 1.0873348501182327 1.127413729674248 0.9992926545142415 1.0445420204249503 1.0465615894494422 1.0632369775180632 0.9621533515159792 1.0 14.351332119501473 -7.258097550878995 24.995099558271857 1.0312616248600748 1.102250611981518 0.6566053245384906 0.029789508545856064 150.12530918547284 1122854.2907679465 0.003987478103709803 0.006735259217699225 5.5195344601428355e-08 7.258097550878995 0.0709889871214433 VLGSEGEEEDEALS(ph)PAKGQK ddPTM_A549_MK2206_60min_R1 2 VLGSEGEEEDEALSPAKGQK 20 1 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 VLGSEGEEEDEALS(1)PAKGQK;VLGS(0.001)EGEEEDEALS(0.999)PAKGQK 145.13 1.6797000000000002e-21 14093300.0 5838.0 6753.0 6441.1 5858.0 8247.4 6371.0 6557.5 6480.1 10357.900000000001 10438.6 10897.099999999999 True False 6823.311674603632 7096.698855604893 7354.544834094828 7293.210262975611 7034.21838526472 7045.174991272469 7748.912868345136 7398.674019473949 8011.852188167452 8080.513010077444 8191.049325339917 0.8330204597224147 0.8663967916357761 0.8978757839172974 0.8903877846777528 0.8587688958853645 0.860106527435678 0.9460220004258816 0.9032632725803924 0.9781228106369597 0.9865052313968472 1.0 12.999832566747264 -8.448999895550784 0.8237975473848782 0.9955547929532113 0.8676836440990848 0.8070168297188477 0.024206568592956147 0.14855938815471545 0.20153400694227042 0.005356419275327201 0.006526115374874213 3.556314040994682e-09 8.448999895550784 -0.12787114885412643 VLGSEGEEEDEALS(ph)PAKGQK ddPTM_A549_PD325901_60min_R1 2 VLGSEGEEEDEALSPAKGQK 20 1 P18858;P18858-2;M0R0Q7;P18858-3;B4E135;F5GZ28;M0QY71;M0R1G7 P18858 LIG1 DNA ligase 1;DNA ligase 1 VLGSEGEEEDEALS(1)PAKGQK;VLGSEGEEEDEALS(1)PAKGQK 151.94 3.8997000000000003e-22 19862200.0 9476.8 9806.8 9908.8 11065.099999999999 12572.099999999999 13310.8 11501.8 12922.099999999999 11660.3 12976.9 13692.900000000001 True False 10438.87775954857 10633.253452967592 10581.270754454887 11748.566096334596 11689.079067390465 13202.401257981666 11939.507293026463 12664.358578308656 11170.258140785514 12157.536319348392 12008.760106444768 0.8692719037618475 0.885458062174214 0.8811293306439032 0.9783329829388021 0.9733793467251678 1.0993975348792506 0.9942331420725826 1.054593352357172 0.9301758084742443 1.012388973681286 1.0 13.551799581331917 -6.271061355157002 4.549249280936745 0.9853705364720634 0.8780976400064696 0.5901713465090774 0.04486891206429356 0.13375239621240656 7.464195268314549 0.00714014105712647 0.01823645402433142 5.357209679354515e-07 6.271061355157002 -0.10727289646559379 VLGTPVETIELTEDRR ddPTM_A549_PD325901_60min_R1 1 VLGTPVETIELTEDRR 16 1 P27708;F8VPD4 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 0 67.13600000000001 0.0023529 1510400.0 413.29 501.15 569.88 457.96 601.12 592.75 543.74 670.97 533.5 582.31 869.6 False True 455.2468965519827 543.383669286078 608.5554837668287 486.24714909737764 558.8994049514203 587.9228405256365 564.4323232459448 657.5869769842176 511.07885029622526 545.5428472223539 762.644712848583 0.5969318201283699 0.7124990970650871 0.7979541108910205 0.6375801744972145 0.7328437416996625 0.770900041160272 0.7400986510975894 0.8622455068599895 0.6701401605306819 0.7153302685134684 1.0 9.574867306616222 -10.96040556523151 0.717338179700513 1.0449140225748783 0.7228257602615844 0.0 0.10964361669542785 0.4756052447053627 0.33008017793209354 0.09819945180846078 0.013289225849744308 1.0954547296280298e-11 10.96040556523151 -0.3220882623132939 VLHS(ph)GSRDREK ddPTM_A549_PD325901_60min_R1 1 VLHSGSRDREK 11 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 VLHS(0.5)GS(0.5)RDREK 50.088 0.006950799999999999 7023500.0 459.56 332.96 339.55 466.69 647.71 529.13 448.62 680.41 471.4 532.11 574.56 True False 506.2141928898088 361.01970772322153 362.59390488002157 495.5163813701092 602.217084078195 524.8209407124923 465.69247959428384 666.8386887786808 451.5886973376577 498.5124837895391 503.8927624359268 1.0046069930487982 0.7164613874943828 0.7195854592694765 0.9833766593008314 1.1951294580357676 1.041533000345935 0.9241896576228352 1.323374214694091 0.8962000072288796 0.9893225720878025 1.0 8.976972924366208 -6.331657759047152 7.6546490439907275 1.0005967147338588 0.8041995041357696 0.31809180446566443 0.14006493766666367 0.28983298985336153 28.444685964921412 0.02016056984275897 0.04708834938274743 4.6595313808722064e-07 6.331657759047152 -0.19639721059808923 VLHS(ph)PPAVR ddPTM_A549_MK2206_60min_R1 5 VLHSPPAVR 9 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR 120.06 4.4402e-05 351313000.0 11506.8 12966.7 11739.6 10991.5 15805.699999999999 12723.2 11269.8 12948.4 18675.7 17339.0 19200.8 True False 13448.866525750098 13626.649644746332 13404.451807042216 13684.417993427178 13480.702467684185 14069.560579023364 13317.37678134594 14783.875352811912 14445.68376896464 13422.10785754151 14432.711444878614 0.9318322878631631 0.9441503557241623 0.9287549230258275 0.9481529541895632 0.934038106364813 0.9748383477877878 0.9227217513637435 1.0243311112589248 1.0008988140679989 0.9299782586801656 1.0 13.817054741097692 -8.259628099698054 24.999999963174545 1.0022292998972337 0.9416692635181719 0.40687629184846597 0.02618919920979444 46.96703547002353 648255.7888140883 0.002163019676333253 0.002722348981959221 5.500116648913787e-09 8.259628099698054 -0.06056003637906182 VLHS(ph)PPAVR ddPTM_A549_PD325901_60min_R1 8 VLHSPPAVR 9 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR 143.96 4.905600000000001e-07 422626000.0 8851.9 8682.1 8949.2 9850.7 11460.1 11106.0 9758.1 10023.7 10395.0 10386.0 11319.2 True False 9750.538371575636 9413.771036832602 9556.54652791132 10459.15536643711 10655.18211119872 11015.556418182561 10129.44983533721 9823.76944005947 9958.13429958624 9730.226187514147 9927.010158320698 0.9822230677786559 0.9482987210345599 0.9626812479788932 1.0536057886140444 1.0733525947153058 1.1096549960664095 1.0203928145320602 0.9896000188763087 1.0031352986215547 0.980176914532357 1.0 13.277143553345914 -6.231816292746013 22.87405729296725 1.0176652558086337 0.9627907309460283 0.33221915875938635 0.03833609106118488 275.30373027769986 212579.41637556796 0.005920142910808471 0.015659192246034036 5.863861543327032e-07 6.231816292746013 -0.054874524862605356 VLHSGS(ph)RDREK ddPTM_A549_MK2206_60min_R1 1 VLHSGSRDREK 11 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 VLHS(0.154)GS(0.846)RDREK 60.401 0.0017124000000000002 17314000.0 1656.6 1238.9 1387.7 1234.4 1330.5 1369.9 869.78 865.34 1579.1 1978.0 1628.8 True False 1936.193580018563 1301.9547182302538 1584.4967266885153 1536.8280554143216 1134.785212502692 1514.8619087339753 1027.807767385319 988.0045949926059 1221.4363713045338 1531.1684262193376 1224.324007406894 1.5814388742726704 1.0634069987631631 1.294180884392248 1.2552461979972998 0.9268667490284339 1.2373047490446893 0.8394900052333415 0.8069796794111632 0.9976414445155934 1.25062354160835 1.0 10.257769690749079 -2.000000000000186 0.41279221788812265 0.9784462844554825 10.194164300369975 0.44474720312504545 0.16487250865456005 35.196895728691686 0.4013848666761917 0.029529646458866552 269.54945399808867 0.009999999999995715 2.000000000000186 9.215718015914492 VLHSGS(ph)RDREK ddPTM_A549_PD325901_60min_R1 2 VLHSGSRDREK 11 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 VLHS(0.021)GS(0.979)RDREK;VLHS(0.162)GS(0.838)RDREK 86.46700000000001 6.9407e-05 71093000.0 3618.0 2780.8999999999996 3184.0 3170.8 3497.8 2632.56 2966.8999999999996 3578.7 3393.0 3499.3999999999996 3988.8999999999996 True False 3985.29669656917 3015.2562025693996 3400.085386947398 3366.653114590717 3252.1265947549205 2611.121304182487 3079.8070030499766 3507.3200210641594 3250.4040094753345 3278.44728678866 3498.2905877204594 1.1392125944477502 0.8619227382520522 0.9719276605786332 0.9623709152144735 0.9296330631224254 0.7463992023269669 0.8803748361730084 1.0025810987158685 0.9291406554060303 0.9371569355320329 1.0 11.77243441727528 -5.2460641878577805 24.30453720882174 0.9419288624077576 1.1392128063919003 0.4052193424709537 0.07206561677728404 1711.1974399895557 2704933.027335972 0.010515243823637645 0.3415679370823848 5.67460729646904e-06 5.2460641878577805 0.19728394398414262 VLHSSNPVPLYAPNLS(ph)PPADSR ddPTM_A549_MK2206_60min_R1 1 VLHSSNPVPLYAPNLSPPADSR 22 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 VLHSSNPVPLY(0.086)APNLS(0.883)PPADS(0.031)R 73.805 6.591399999999999e-05 1747100.0 943.21 1204.9 1254.5 830.13 1476.2 1235.2 959.97 924.84 1599.4 1533.0 1563.8 True False 1102.4007887295113 1266.2242634559957 1432.4069637751254 1033.5118872659516 1259.0529355103147 1365.9080441405988 1134.3841229470495 1055.9389022037133 1237.1384537169718 1186.6942352852604 1175.465301315631 0.9378420507144338 1.0772110942269273 1.2185871945109008 0.8792364063058271 1.0711102523410336 1.162014772032672 0.9650511347952154 0.8983156721188293 1.0524670122821265 1.0095527566462927 1.0 10.199016237214302 VLHSSNPVPLYAPNLS(ph)PPADSR ddPTM_A549_PD325901_60min_R1 2 VLHSSNPVPLYAPNLSPPADSR 22 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 VLHSSNPVPLY(0.031)APNLS(0.952)PPADS(0.017)R;VLHSSNPVPLYAPNLS(0.931)PPADS(0.069)R 91.618 4.8156e-07 10392600.0 4803.8 4637.8 4957.4 4891.7 5300.3 5619.099999999999 5201.2 5583.9 5046.8 5440.5 5498.0 True False 5291.478239629349 5028.6436823605145 5293.83897526791 5193.849199143248 4928.025213042343 5573.339912606664 5399.134512205848 5472.524734015194 4834.700546719757 5096.985901518461 4821.780854693551 1.0974115993841969 1.0429017481094358 1.097901197669499 1.0771640926168438 1.0220342569582717 1.1558675270738488 1.1197386764166806 1.134959239943102 1.0026794440509734 1.057075394987523 1.0 12.235350367989229 -8.780166005956856 24.821022098030642 1.0012652744110764 1.0919847460596561 0.38184436902382046 0.03977526488718015 115.61602467872565 153241.45129412453 0.006324533844460959 0.006738828987837661 1.6589526634475072e-09 8.780166005956856 0.09071947164857974 VLHVS(ph)ENPVPLTVR ddPTM_A549_PD325901_60min_R1 2 VLHVSENPVPLTVR 14 0 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 VLHVS(1)ENPVPLTVR;VLHVS(1)ENPVPLTVR 78.234 0.00020459 8596000.0 722.82 622.37 527.12 1076.6100000000001 678.37 762.01 610.4 475.96000000000004 770.77 793.9300000000001 891.3499999999999 True False 796.2001542880399 674.8193041077046 562.8935330300603 1143.1097545412863 630.7236314494533 755.8044432036106 633.6291060236967 466.46660441660305 738.3772173248759 743.8011243070583 781.7196007331927 1.0185239739943397 0.8632498193403059 0.7200708956281889 1.462301512548921 0.8068412648958567 0.9668485253468435 0.8105580382395446 0.5967185727198004 0.944555076567525 0.9514935068910007 1.0 9.610507401943327 VLIEDT(ph)DDEANT ddPTM_A549_MK2206_60min_R1 2 VLIEDTDDEANT 12 0 Q9UBH6-2;Q9UBH6 Q9UBH6-2 XPR1 Xenotropic and polytropic retrovirus receptor 1 1 VLIEDT(1)DDEANT;VLIEDT(1)DDEANT 166.93 5.8811999999999994e-15 8578200.0 1727.25 2001.6 1892.37 1535.85 2772.2 2073.66 2156.7 2090.35 3550.3999999999996 2671.3 2928.8999999999996 True False 2018.7675727919002 2103.472890475159 2160.7365213544317 1912.1333189469258 2364.4130523111326 2293.0933248158954 2548.5444732230203 2386.663513928392 2746.240068823771 2067.8514747015774 2201.5732964722797 0.9169658698289533 0.9554407722176168 0.9814510944590019 0.8685303923384509 1.0739651757676119 1.0415702845280073 1.1576014649644937 1.0840717943630105 1.2473988820741264 0.9392607904606342 1.0 11.104319161049903 -7.04772193428829 1.9923726982092234 1.117347299372251 0.9367188417130582 0.34436309124421627 0.08599218324752665 0.24108478214557533 1.8943517829967145 0.014263166769246294 0.028736658985751964 8.959382242792043e-08 7.04772193428829 -0.1806284576591929 VLINGSAYQPS(ph)FASPNKK ddPTM_A549_MK2206_60min_R1 1 VLINGSAYQPSFASPNKK 18 1 P18583-5;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 VLINGSAY(0.001)QPS(0.535)FAS(0.463)PNKK 94.35799999999999 1.4622e-06 3562100.0 2071.9 2599.0 3174.5 2858.5 3518.3 2458.5 2338.9 2416.8 4023.3 3600.2 3338.6 True False 2421.5860669084036 2731.27799877345 3624.691834598753 3558.832628322943 3000.7627306638274 2718.6568381797774 2763.8478547880213 2759.388801139586 3112.028973889894 2786.9123195525067 2509.5334793275138 0.9649546765789003 1.0883608532313176 1.4443687898398037 1.4181251844771614 1.195745247227365 1.0833315676299735 1.1013393037213661 1.0995624580705043 1.2400826685619004 1.1105300417427875 1.0 11.293203477676261 -7.0649670027975136 6.11793538638254 1.1126514085008503 1.2427448916113408 0.1534383609686063 0.13572530673450092 0.3594810934832614 26.26817565009649 0.02272207840947339 0.03990107636346663 8.610591719992335e-08 7.0649670027975136 0.13009348311049052 VLINGSAYQPSFAS(ph)PNKK ddPTM_A549_PD325901_60min_R1 2 VLINGSAYQPSFASPNKK 18 1 P18583-5;P18583-2;H7C1M2 P18583-5 SON Protein SON 1 VLINGSAYQPS(0.002)FAS(0.998)PNKK;VLINGSAYQPS(0.002)FAS(0.998)PNKK 161.58 3.1592e-23 13610400.0 7844.4 7140.9 7985.0 9204.099999999999 9851.5 9568.8 9440.4 9358.099999999999 9426.7 8105.700000000001 8954.6 True False 8640.75771325793 7742.688703990733 8526.9101177057 9772.616352972253 9159.56462582998 9490.874865325528 9799.659587985101 9171.445354212563 9030.528581232295 7593.904718672585 7853.240967886294 1.10027920301847 0.9859227210335664 1.0857823098226826 1.24440551269657 1.1663419807548938 1.208529689097265 1.2478490890650318 1.1678548247426392 1.1499110517759736 0.9669771690090505 1.0 12.939072449920772 -10.47693384705998 0.864753532685481 1.0025565107386518 1.1514686577946942 0.43028839099050853 0.07280486870873566 0.5380835516159962 0.7408555866986225 0.048296359513733005 0.014925156133888754 3.334772050675151e-11 10.47693384705998 0.1489121470560424 VLISVGS(ph)YK ddPTM_A549_MK2206_60min_R1 2 VLISVGSYK 9 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 VLISVGS(1)YK;VLISVGS(1)YK 163.64 4.674e-06 14673000.0 4242.6 5954.5 6071.6 6057.5 10420.3 7505.8 8047.9 7579.8 10978.4 10585.3 10676.5 True False 4958.647158388724 6257.558616274147 6932.644177964964 7541.58777193151 8887.48767368794 8300.058774053192 9510.099256295061 8654.259862163954 8491.809928902341 8194.07337818987 8025.230393590185 0.6178822183534114 0.7797356972171303 0.8638560935898018 0.9397347368313608 1.1074433054017299 1.0342455439886828 1.185025075901977 1.0783814841099366 1.0581390829208863 1.021039020229817 1.0 12.970327095329273 -5.781752455706396 1.0769336732934964 1.048815340461422 0.5862879005138996 0.872015212020713 0.055487595757173915 0.24201927409267898 0.371977554404184 0.009218439398453971 0.10296487296571448 1.6529036713128944e-06 5.781752455706396 -0.46252743994752243 VLISVGS(ph)YK ddPTM_A549_PD325901_60min_R1 2 VLISVGSYK 9 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 VLISVGS(1)YK;VLISVGS(1)YK 154.24 1.5642e-05 32634000.0 17304.3 16452.9 18404.0 17875.8 19663.8 18759.6 18182.3 19298.0 18586.9 19792.2 20171.7 True False 19061.01979724762 17839.443624457566 19653.00611224242 18979.947567112635 18282.682524427317 18606.828037325547 18874.23737623634 18913.086251011864 17805.75723068586 18542.51711424202 17690.708778941764 1.077459362167389 1.0084075119529892 1.1109224824070638 1.0728766045657552 1.0334624097249405 1.0517853337495608 1.0669011407108455 1.0690971451367264 1.0065033263043166 1.04815003999807 1.0 14.110704230369217 -8.769796389129931 21.938671684224555 1.0030709806309985 1.0605697179373197 0.2797747644376445 0.028076398059640403 21.458588958946233 56332.253202132895 0.004046338735529594 0.004349880595646679 1.699040029001634e-09 8.769796389129931 0.05749873730632116 VLITTDLLAR ddPTM_A549_MK2206_60min_R1 2 VLITTDLLAR 10 0 P60842;Q14240-2;Q14240;E7EQG2 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 117.81 0.00019580000000000002 8964600.0 2038.41 1963.79 1933.01 2061.17 2737.8 2017.6999999999998 2112.09 2010.9 3160.1 2593.6 2811.9 False True 2382.443773660292 2063.7385229747265 2207.1398844535306 2566.1567425294384 2335.073246741729 2231.211674759137 2495.8294136642153 2295.9512331229694 2444.342395642742 2007.7039586665696 2113.6276255080093 1.1271823593276857 0.9763964560591453 1.0442425419771117 1.2141006824287055 1.1047704044748636 1.0556313930760943 1.1808274000318972 1.086260988177205 1.1564678499389152 0.9498853697959304 1.0 11.045505512776455 -4.906860615625682 20.044833457777457 1.0847351975578965 4.252137311927968 0.023105595687478497 0.08040067293141415 1846.0293440210294 405711.9444169287 0.010535566256838524 5643.624881560308 1.2391942351440084e-05 4.906860615625682 3.1674021143700717 VLITTDLLAR ddPTM_A549_PD325901_60min_R1 2 VLITTDLLAR 10 0 P60842;Q14240-2;Q14240;E7EQG2 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 163.32 1.5757e-08 23026800.0 3697.3 4010.3 4056.2999999999997 3581.1000000000004 5164.1 4311.2 4119.7 3905.2 4831.9 4475.5 3660.3 False True 4072.647174191599 4348.2620551490745 4331.584910513417 3802.296413731809 4801.391431177851 4276.091016573806 4276.477437886341 3827.3077224298645 4628.832046384877 4192.916166206394 3210.1063045534374 1.2686954224583384 1.3545539127415183 1.3493587126286741 1.184476790796108 1.4957110374716327 1.3320714676982197 1.3321918441829446 1.1922682177225552 1.441955999967671 1.3061611574230023 1.0 11.648405358493358 -10.902951113807259 1.0485647808412202 0.991753377537706 1.3354501294157295 0.0585720620291027 0.12471494120755519 0.2612202287192968 0.4893375365729763 0.068846171571619 0.014857881742317199 1.2503997730698666e-11 10.902951113807259 0.3436967518780235 VLKIS(ph)EEDELDTK ddPTM_A549_PD325901_60min_R1 1 VLKISEEDELDTK 13 1 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 VLKIS(0.999)EEDELDT(0.001)K 42.277 0.023869 2046500.0 1593.7 1252.7 1470.4 1659.9 1882.5 1788.8 1504.9 1809.7 1554.9 1573.4 1931.2 True False 1755.4912507800682 1358.2694253510322 1570.1901862334955 1762.4282530935834 1750.279694272439 1774.232605874749 1562.1697930128782 1773.6041138178148 1489.5529603104042 1474.0552554818767 1693.674642885445 1.0364985141356953 0.8019659685268733 0.9270908039093186 1.0405943434867784 1.033421443501426 1.047564013151936 0.9223553057105895 1.0471929312209558 0.8794799913711366 0.8703296478304642 1.0 10.725941042343933 -6.0110174371795715 24.931763614977207 0.9676248766422704 0.9055562886984276 0.07624063469861553 0.0801051910739084 940.2192043466878 2127673.55349141 0.010973108457828116 0.031164036141294163 9.749504920943023e-07 6.0110174371795715 -0.062068587943842735 VLKT(ph)SPVR ddPTM_A549_PD325901_60min_R1 1 VLKTSPVR 8 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 VLKT(0.581)S(0.419)PVR 57.174 0.006829099999999999 43026000.0 4925.5 4584.3 5032.2 4615.9 6864.9 5275.7 4808.9 5596.7 5642.7 6040.3 5616.5 True False 5425.533134038545 4970.6350496022515 5373.715353076851 4901.01365953049 6382.733106619317 5232.736448352761 4991.905321031054 5485.069427973785 5405.556942017824 5658.914427155955 4925.706105926938 1.101473173056383 1.0091213204176457 1.0909533044634632 0.9949870240194119 1.2958006363674819 1.0623322495949126 1.0134395381454977 1.1135600277437958 1.0974176749021827 1.1488534446557361 1.0 12.26611483613466 -10.737730393503941 0.8510916072348798 0.996500753219096 1.0863797823475914 0.0 0.0886350317619914 1.0464159846497698 1.2621031203308115 0.06189341427135212 0.01368017731616229 1.8292354382790114e-11 10.737730393503941 0.08987902912849532 VLKT(ph)SPVREIGQSPSR ddPTM_A549_PD325901_60min_R1 1 VLKTSPVREIGQSPSR 16 2 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 VLKT(0.5)S(0.5)PVREIGQSPSR 58.073 0.014159999999999999 26852000.0 3859.6 3597.0 4555.9 4501.0 5421.4 4939.4 4662.0 4725.3 4368.5 5129.5 5404.1 True False 4251.423750712653 3900.1318136725968 4865.090770852276 4779.016547487326 5040.6195668146665 4899.175164052851 4839.414961144289 4631.050184573863 4184.907136867964 4805.622494594053 4739.429959412407 0.8970327206269639 0.8229115836867719 1.0265139083214658 1.0083526053584357 1.0635497538694718 1.0337055734568235 1.0210964193137435 0.977132318492585 0.8829979918907395 1.0139663494868596 1.0 12.210497832354378 -5.7563982323128755 24.99793771856 0.9731475382553669 0.859972137089648 0.4468769734195869 0.053515792354062466 115.35127199635878 571980.9874770454 0.009337863529259749 0.03402779716729281 1.752272994060386e-06 5.7563982323128755 -0.11317540116571889 VLKTS(ph)PVR ddPTM_A549_MK2206_60min_R1 1 VLKTSPVR 8 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 VLKT(0.208)S(0.792)PVR 47.977 0.030262 4355800.0 2791.9 2813.2 3254.5 2711.7 3374.2 2844.2 2759.7 2876.0 4013.4 3608.4 4186.3 True False 3263.1044645984703 2956.379863851278 3716.037037549736 3376.0666217328376 2877.859649775712 3145.171356172839 3261.101767864593 3283.6818073806057 3104.3713080828406 2793.25993385736 3146.7261739977157 1.0369839268387637 0.93950973182245 1.1809216411190768 1.072882238572338 0.9145567458510615 0.9995058935099835 1.036347488641368 1.0435232129552907 0.9865400217327884 0.8876717513391706 1.0 11.619635926405051 VLKTS(ph)PVR ddPTM_A549_PD325901_60min_R1 1 VLKTSPVR 8 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 VLKT(0.311)S(0.689)PVR 49.489 0.027642 8256800.0 4028.4 4443.3 5572.9 4795.6 5490.0 5804.6 4806.7 5287.6 5874.8 5862.8 5819.6 True False 4437.360202448659 4817.752484762706 5951.11050657008 5091.813320402186 5104.401339471815 5757.329262109 4989.621598827164 5182.1346699580445 5627.902586167314 5492.621807448296 5103.826093483918 0.8694183777370198 0.9439491856733827 1.1660096558085893 0.9976463200623021 1.000112708775213 1.1280418173846898 0.9776237488180565 1.015343112214208 1.1026830622917358 1.07617730440713 1.0 12.317363456566058 -5.533834178056943 24.355724436781014 1.0472799120431637 0.88805103109993 0.49277463409984945 0.05851693646206749 80.10254882473303 178081.82855473892 0.008014761558535395 0.03110486090363521 2.9252690883495894e-06 5.533834178056943 -0.15922888094323373 VLKTS(ph)PVREIGQSPSR ddPTM_A549_MK2206_60min_R1 1 VLKTSPVREIGQSPSR 16 2 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 VLKT(0.153)S(0.846)PVREIGQS(0.001)PSR 56.528999999999996 0.0021138000000000003 9856300.0 1901.5 2312.8 2714.0 2183.3 3619.8 2166.7 2449.5 2059.3 3213.2 3565.8 3845.5 True False 2222.426712788422 2430.5116412324874 3098.88601011215 2718.208598012061 3087.3322151200655 2395.9787558609414 2894.542443158432 2351.212081341753 2485.415330426019 2760.283303444346 2890.556219599219 0.7688578058850437 0.8408456561932853 1.072072561363922 0.9403756202980704 1.0680754777183092 0.8288988602315261 1.001379050693491 0.8134116421606058 0.859839816840036 0.9549315404171812 1.0 11.497131416850207 VLLDQLR ddPTM_A549_PD325901_60min_R1 1 VLLDQLR 7 0 H0Y512;Q9HDC9-2;Q9HDC9 H0Y512 APMAP Adipocyte plasma membrane-associated protein 0 86.866 0.035962 1382600.0 922.84 1113.2 1046.5 1013.0 1380.2 1358.5 1290.6 1196.9 1439.7 1152.3 1037.9 False True 1016.5260374410987 1207.0132707757398 1117.5217831157188 1075.5707093100777 1283.2595134315125 1347.4368264092388 1339.714489243418 1173.0268905501136 1379.194415691613 1079.5435813472513 910.244879790184 1.1167610606888698 1.3260313763632072 1.2277155388924716 1.1816278599205108 1.4097959152786559 1.4803014620854882 1.4718176602676731 1.2886937532903258 1.5151905232463643 1.1859924788548017 1.0 9.830110910177186 -3.9593273433766365 16.061604702115634 1.2818771598152756 1.2699243733139607 0.0 0.1587277046773202 0.0 0.0 0.02702231504718544 0.0 0.00010981777912938828 3.9593273433766365 -0.011952786501314927 VLLGETGK ddPTM_A549_MK2206_60min_R1 2 VLLGETGK 8 0 P62280;M0QZC5;M0R1H6 P62280 RPS11 40S ribosomal protein S11 0 ; 89.29799999999999 0.007378699999999999 3247300.0 3688.6000000000004 4444.1 3958.6 3995.0 5484.0 4216.9 4029.7 3861.0 6075.700000000001 5840.700000000001 5883.0 False True 4311.145502388311 4670.28570771416 4519.989005022091 4973.775179342362 4677.310864610873 4663.129559048326 4761.844328718321 4408.308573816592 4699.5636508992175 4521.281813457679 4422.088737459944 0.9749115764837955 1.0561266372046574 1.0221389197219912 1.1247569812900922 1.0577152884764427 1.054508363784404 1.0768314729598876 0.9968837885303795 1.0627474774734293 1.0224312721627362 1.0 12.110512260474051 -10.938983337621844 0.8150677148058728 0.9944523939083795 1.0504530150481346 0.10291716524813954 0.03848154918606554 1.0984181105493032 1.068914259141783 0.042286721540621734 0.006663755497746055 1.1508445420246782e-11 10.938983337621844 0.056000621139755125 VLLGETGK ddPTM_A549_PD325901_60min_R1 2 VLLGETGK 8 0 P62280;M0QZC5;M0R1H6 P62280 RPS11 40S ribosomal protein S11 0 ; 100.15 0.0066251999999999995 7532900.0 6000.2 6192.2 5992.9 5681.7 8405.8 7675.4 6680.8 7354.9 7886.8 7042.4 7778.6 False True 6609.335886886223 6714.038425527787 6399.614232235257 6032.645704923069 7815.405606435734 7612.89408717076 6935.041499874034 7208.200749692572 7555.345223085793 6597.741662136499 6821.8815126080835 0.9688435477325372 0.9841915918825352 0.938101053266258 0.8843081917757788 1.1456378408202248 1.1159522593731277 1.016587797231132 1.0566294264083156 1.107516336823226 0.9671439836565128 1.0 12.735953982055909 -6.754180448795207 24.999998413571287 1.0601708761601283 0.9463304205391815 0.5053448341560849 0.054522011289367456 112.03595893859236 385851.8750373732 0.00798164369891017 0.01635265292542559 1.761244099716514e-07 6.754180448795207 -0.1138404556209468 VLLGFS(ph)SDESDVEASPR ddPTM_A549_MK2206_60min_R1 1 VLLGFSSDESDVEASPR 17 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 VLLGFS(0.691)S(0.137)DES(0.171)DVEAS(0.002)PR 61.732 0.0033266 845490.0 796.07 854.62 848.88 603.08 966.54 1328.7 915.23 945.23 1407.1 1165.3 1019.3 True False 930.4271539571282 898.1165076228424 969.2639485128968 750.8346270732898 824.363246367796 1469.3021520803225 1081.5154440709912 1079.2192471454698 1088.3940966769737 902.0579206640014 766.1796787511332 1.2143720066730523 1.172200898210672 1.265060892887148 0.9799719933803833 1.075939847049326 1.9176991935824679 1.4115689492494146 1.4085720061181843 1.4205468075726668 1.1773451393729844 1.0 9.581538951697114 VLLGFS(ph)SDESDVEASPR ddPTM_A549_PD325901_60min_R1 1 VLLGFSSDESDVEASPR 17 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 VLLGFS(0.85)S(0.123)DES(0.028)DVEASPR 123.97 4.2249e-10 1588600.0 1672.4 1661.3 1874.5 1631.0 2018.4 1916.3 1808.4 1424.2 1553.1 2106.0 2219.8 True False 1842.1808168441912 1801.3035813328563 2001.7148422842015 1731.7431657302434 1876.6345471019881 1900.6942881472396 1877.2196515944509 1395.793213736714 1487.8286080507353 1973.0268005877915 1946.7786724715788 0.9462713162485015 0.9252739444931194 1.028219011534001 0.889542910150987 0.9639691320017711 0.9763278769302359 0.9642696820852174 0.7169758090500611 0.7642515449184716 1.0134828516910392 1.0 10.926873159332567 VLLGFSS(ph)DESDVEASPR ddPTM_A549_PD325901_60min_R1 1 VLLGFSSDESDVEASPR 17 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 VLLGFS(0.444)S(0.497)DES(0.058)DVEAS(0.001)PR 63.13399999999999 0.002993 1621500.0 1078.4 1125.3 978.37 1041.0 1361.1 1420.2 1005.3 1436.3 1552.1 1303.0 1340.4 True False 1187.87837412388 1220.1329802406938 1044.768071616747 1105.3002057174642 1265.5010315400891 1408.6343620658092 1043.557241621268 1407.651869744447 1486.8706345731418 1220.7283576286288 1175.5392974956771 1.0104965241523525 1.0379346593006438 0.8887563978868932 0.9402494736434184 1.0765280533250252 1.1982877689131353 0.8877263770291827 1.1974519888388702 1.2648412841159056 1.038441131001933 1.0 10.199107052793384 -6.891770678997948 4.84441006823898 1.1194386931249212 0.9692354853355354 0.23454465337763353 0.10528658171597224 0.23986452501152747 9.294181027919379 0.017992142199985267 0.03468737260424778 1.2830078719100289e-07 6.891770678997948 -0.15020320778938578 VLLGFSSDES(ph)DVEASPR ddPTM_A549_MK2206_60min_R1 3 VLLGFSSDESDVEASPR 17 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 VLLGFSS(0.026)DES(0.973)DVEASPR;VLLGFS(0.005)S(0.005)DES(0.897)DVEAS(0.093)PR;VLLGFSSDES(1)DVEASPR 210.9 5.8772e-55 7018500.0 7057.2 7773.4 7037.1 6578.1 10041.9 7676.0 6451.6 6872.0 10831.4 10181.4 11199.599999999999 True False 8248.28282802548 8169.032857124101 8035.0665960796605 8189.734795302135 8564.749812424488 8488.26922508358 7623.77220913694 7846.127044617358 8378.105194191583 7881.414668710606 8418.430226764642 0.9797887023879804 0.9703748367661664 0.9544613876508524 0.9728339577210705 1.0173808633817092 1.0082959645014222 0.9056049647948317 0.9320178267525737 0.9952099106975011 0.9362095374566737 1.0 13.039335525650078 -8.959721456057526 24.969985787463134 0.9978867625796303 0.9680767115793217 0.0 0.03491607656312688 201.6578661712712 125014.8731215319 0.0054344517241518425 0.005778097654062842 1.097181671172692e-09 8.959721456057526 -0.029810051000308535 VLLGFSSDES(ph)DVEASPR ddPTM_A549_PD325901_60min_R1 2 VLLGFSSDESDVEASPR 17 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 VLLGFSSDES(1)DVEASPR;VLLGFSSDES(1)DVEASPR 264.3 8.744799999999998e-100 11377000.0 12830.0 14081.400000000001 13299.5 13769.0 15203.6 15380.7 15046.1 15130.4 15437.2 15891.6 16724.7 True False 14132.492155053202 15268.08899667759 14202.084046390366 14619.479858332148 14135.75158557263 15255.444678654825 15618.687569041846 14828.612302430813 14788.428168309063 14888.201663922577 14667.667926608432 0.9635132337169718 1.040935005692346 0.9682578114975281 0.9967146741719679 0.9637354524456571 1.0400729519503311 1.0648378220172396 1.0109727310863381 1.008233090788861 1.0150353647503894 1.0 13.840351888722415 -5.220543498023975 22.173168981657025 1.0070213482451105 0.9635126764540166 0.17050436225444654 0.028917442859769226 7663.355541251521 4154585.0038430663 0.0038466570279338313 1.4004290746031662 6.0180598425639146e-06 5.220543498023975 -0.043508671791093856 VLLGLK ddPTM_A549_PD325901_60min_R1 1 VLLGLK 6 0 Q12797;Q12797-11;E5RG56;Q12797-6;Q12797-2;Q12797-9;Q12797-8;Q12797-10;Q12797-5;E5RG29;O14879;A0A087WUJ2 Q12797 ASPH;IFIT3 Aspartyl/asparaginyl beta-hydroxylase;Interferon-induced protein with tetratricopeptide repeats 3 0 118.11 0.051009 5056700.0 1637.4 1388.8 1744.5 1360.2 2025.7 1687.1 1840.0 1575.2 1675.0 2001.8 1956.9 False True 1803.6276426098282 1505.8390499940238 1862.8922605306946 1444.2164647616676 1883.421820285621 1673.3608169562224 1910.0222068866346 1543.781400279505 1604.6055749694044 1875.4060063706754 1716.2137058111682 1.0509341794105669 0.8774193125804745 1.0854663694986626 0.8415131867735893 1.0974284926802993 0.9750305636705707 1.1129279532142315 0.8995274860305564 0.9349683955652759 1.0927578541183278 1.0 10.74501349549337 -4.441675985056295 19.634075219762558 0.9785218693380197 0.9905607236444697 0.0 0.09512572183728608 0.0 0.0 0.010197153368644003 0.0 3.616796010207769e-05 4.441675985056295 0.01203885430645002 VLLLEANRHS(ph)PGPER ddPTM_A549_MK2206_60min_R1 2 VLLLEANRHSPGPER 15 1 Q9UDT6;Q9UDT6-2;H7C4L6 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 VLLLEANRHS(1)PGPER;VLLLEANRHS(1)PGPER 117.26 3.6399e-07 39661000.0 464.79 858.9300000000001 502.0 455.57000000000005 1005.84 564.24 592.4000000000001 597.76 970.21 753.4000000000001 941.88 True False 543.2351889755092 902.6458682133433 573.1911485174277 567.1846704513142 857.8822684281909 623.9475022878008 700.0314118501959 682.4943105632241 750.458984107005 583.2064167409754 707.9852014344328 0.7672973783560344 1.2749501915923 0.8096089400683771 0.8011250366563513 1.2117234466060236 0.8813002037664557 0.988765599099922 0.9639951642780636 1.05999247242247 0.8237550948231037 1.0 9.467575394658866 -8.743652959703073 23.736877698269485 1.0283297777914335 0.9687923594602595 0.0 0.1647402311523859 411.9292207931318 549738.68765703 0.02377857730319893 0.026928081961691445 1.8044590897783436e-09 8.743652959703073 -0.059537418331173986 VLLLEANRHS(ph)PGPER ddPTM_A549_PD325901_60min_R1 2 VLLLEANRHSPGPER 15 1 Q9UDT6;Q9UDT6-2;H7C4L6 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 VLLLEANRHS(1)PGPER;VLLLEANRHS(1)PGPER 116.06 4.0803000000000003e-07 50937000.0 800.19 852.51 771.56 831.5899999999999 951.05 909.5699999999999 791.02 903.21 1005.7 898.61 860.06 True False 881.424699731256 924.3540095841056 823.9227013671896 882.9554256220806 884.2515289443851 902.162763486972 821.1226989627528 885.1947679954626 963.4339264159579 841.8716112422583 754.2780723695405 1.1685673122675946 1.2254817466458716 1.0923328299586685 1.1705967042742 1.172315040481738 1.1960612359482445 1.0886206679497152 1.1735655594688725 1.2772927673601342 1.1161289742886804 1.0 9.55895267569713 -11.022738260248484 1.3179553339130445 1.0002158107235184 1.1827890462465394 0.2898727916986332 0.060393158665238166 0.25273956020669724 0.7835636802263672 0.04084333734836484 0.00926350582745363 9.489902265683019e-12 11.022738260248484 0.18257323552302096 VLLPEYGGTK ddPTM_A549_MK2206_60min_R1 2 VLLPEYGGTK 10 0 P61604;B8ZZL8;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 ; 144.77 1.1699999999999999e-07 12126400.0 8407.8 10483.9 10128.1 8465.5 12154.3 9981.0 8864.1 8810.2 13488.5 12770.099999999999 12886.8 False True 9826.831089025756 11017.485729642554 11564.416875098324 10539.547880030741 10366.418570703856 11037.182795148405 10474.592231231136 10059.07283010592 10433.376286708373 9885.325540780364 9686.65190241353 1.014471376490498 1.137388422814846 1.1938507744060596 1.0880485833711753 1.0701756060957404 1.1394218463036103 1.0813428970872052 1.0384468164484777 1.0770879754756943 1.020510042104159 1.0 13.241782382866045 -10.166010957571158 0.29320330025074587 0.970434372648117 1.1171511382182886 0.3599862353009068 0.045692890681233965 2.1104734189545633 0.3136716097672545 0.10782739408191584 0.027701914236904993 6.823214784486659e-11 10.166010957571158 0.14671676557017155 VLLPEYGGTK ddPTM_A549_PD325901_60min_R1 2 VLLPEYGGTK 10 0 P61604;B8ZZL8;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 ; 166.33 4.7648999999999995e-09 31160000.0 14554.7 15330.5 16393.4 15475.400000000001 18783.3 17092.1 16870.699999999997 16654.6 16954.6 16922.1 18718.1 False True 16032.28242939617 16622.45503739444 17505.954705522432 16431.280310816564 17464.025806867216 16952.907604467684 17512.72372050128 16322.410937719045 16242.057123209708 15853.63571805634 16415.89236381216 0.9766317952192697 1.0125830913729452 1.0664028684857394 1.0009373810855586 1.0638487034287336 1.0327131311995772 1.0668152137197864 0.9943054313453474 0.9894105518755921 0.9657492487587649 1.0 14.002805556134374 -8.316926046692398 24.293299239954624 0.9948076377397514 1.032164689591447 0.3509118261054758 0.028155908708894103 192.17579635619825 84138.52491977403 0.004203262226224954 0.005081498411553766 4.8202987250744694e-09 8.316926046692398 0.037357051851695466 VLLQASQDENFGNTT(ph)PR ddPTM_A549_MK2206_60min_R1 2 VLLQASQDENFGNTTPR 17 0 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 VLLQASQDENFGNT(0.185)T(0.815)PR;VLLQASQDENFGNT(0.194)T(0.806)PR 165.58 7.247700000000001e-23 14388800.0 2598.2 3008.1 2890.1 2241.41 3309.7 2909.7 2639.54 2055.46 3548.8999999999996 4100.3 3547.0 True False 3036.712640108795 3161.199441366069 3299.9596381080046 2790.5555506207174 2822.847514333079 3217.602522697459 3119.110251240827 2346.8277495822467 2745.0798164287603 3174.0393822179744 2666.182007780114 1.138974245286873 1.1856652817179991 1.2377098144382046 1.0466485568043262 1.058760244460357 1.2068202820768648 1.1698789663042641 0.8802203835799776 1.0295920565131775 1.1904811348047115 1.0 11.380559554495933 -8.230379700079984 24.991984469271465 1.0043329452420426 1.1488067961194863 0.3127079378320379 0.08656324428287233 406.25392369181003 326890.4048778429 0.010651679848619637 0.013750551656363958 5.883290591955825e-09 8.230379700079984 0.1444738508774437 VLLQGK ddPTM_A549_MK2206_60min_R1 1 VLLQGK 6 0 P35579 P35579 MYH9 Myosin-9 0 81.672 0.013549 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VLLS(ph)DSNLHDA ddPTM_A549_MK2206_60min_R1 1 VLLSDSNLHDA 11 0 H3BV90;Q6FI81-3;Q6FI81;Q6FI81-2 H3BV90 CIAPIN1 Anamorsin 1 VLLS(0.93)DS(0.07)NLHDA 44.188 0.058913 1908000.0 169.5 359.49 358.01 216.3 293.46 319.48 408.76 191.63 612.31 568.72 329.71 True False 198.10745612287002 377.7865054940622 408.78120135602444 269.293509710076 250.2924227441112 353.28716154633946 483.02640092485854 218.79413934226213 473.6227626581464 440.2457570068058 247.83390746692461 0.7993557384770242 1.5243535856548636 1.6494159557669867 1.0865886450425084 1.0099200117623723 1.4254997032376953 1.9489923951964572 0.8828256858737618 1.9110490872656523 1.7763741915159854 1.0 7.953229773491554 -7.475593161370452 24.438691092171275 1.4380795824168013 1.2452339246032975 0.10380382025908819 0.3837630810858464 927.3377040084582 479277.2555627746 0.06429651991952504 0.10278289349226181 3.345082541276154e-08 7.475593161370452 -0.19284565781350382 VLLS(ph)DSNLHDA ddPTM_A549_PD325901_60min_R1 2 VLLSDSNLHDA 11 0 H3BV90;Q6FI81-3;Q6FI81;Q6FI81-2 H3BV90 CIAPIN1 Anamorsin 1 VLLS(0.945)DS(0.055)NLHDA;VLLS(0.923)DS(0.077)NLHDA 138.89 1.5418e-08 14508600.0 2272.1000000000004 2470.8 3477.4 2343.95 2285.8999999999996 2200.8900000000003 2274.89 2665.7 2627.8 2628.2 2963.8 True False 2502.761919368386 2679.022987273355 3713.3972753049225 2488.730468003315 2125.3462699268903 2182.9666815427545 2361.462183817574 2612.530522298805 2517.362704420657 2462.255003468581 2599.271389076161 0.9628705682240911 1.0306822898649068 1.4286300733778885 0.9574723433892238 0.8176700127808838 0.8398379217795451 0.9085092821557545 1.0051010961296183 0.9684878289355479 0.9472866180178751 1.0 11.343891557654105 -6.4332117761692835 24.987353908472347 0.9569212119485715 1.140278429132491 0.35297291828149513 0.12302201715473016 62.54182907980155 17426.437741626254 0.017244382304536218 0.040072320047828805 3.6879771690745567e-07 6.4332117761692835 0.1833572171839195 VLLS(ph)PSIPSVGQDQTLSPGSK ddPTM_A549_PD325901_60min_R1 1 VLLSPSIPSVGQDQTLSPGSK 21 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VLLS(0.818)PS(0.181)IPSVGQDQTLSPGSK 78.236 6.3187e-05 2139100.0 1293.5 1110.2 1379.3 1174.6 1197.8 1314.5 1217.8 1353.2 1324.4 1315.3 1651.9 True False 1424.815167775628 1203.7604502472384 1472.9075924046936 1247.1523742898491 1113.6706601856727 1303.7951478210862 1264.1440454057292 1326.2093644351357 1268.7400737250616 1232.2517335294972 1448.7267722568697 0.9834947452210112 0.8309092323682157 1.0166910839303083 0.8608609975136982 0.7687237383283553 0.8999593110231512 0.8725896902121909 0.9154309769323358 0.875762150614902 0.8505756621104328 1.0 10.50056981504416 -10.743805178997492 0.7916329378870502 1.0069528423581398 0.8882301271427053 0.0 0.07770935414321176 0.751481417308246 0.7555235768232607 0.056889482367167156 0.011600767477011727 1.803826741520921e-11 10.743805178997492 -0.11872271521543443 VLLSALER ddPTM_A549_PD325901_60min_R1 1 VLLSALER 8 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 64.567 0.025927 1254300.0 908.89 770.93 1107.0 986.98 1097.5 849.06 922.85 1057.5 857.3 1101.2 1009.6 False True 1001.1598437105458 835.89897667907 1182.1276769317735 1047.9435130057855 1020.4153861694565 842.1455368649456 957.9695617528967 1036.4073329072983 821.2706623410571 1031.6700440680322 885.4256003817031 1.1307102971485692 0.9440646129033513 1.3350954348080328 1.1835477905247167 1.1524575139114566 0.9511194802837193 1.0819311767582958 1.1705188244619396 0.927543389288734 1.1651685286977063 1.0 9.79022727657146 -8.190541098600862 0.8203836039831338 0.9679845742214003 1.1378382634712412 0.0 0.12385615463108052 0.5413171423014448 0.7278986051108928 0.02388454835846392 0.03349552390762085 6.448502928462373e-09 8.190541098600862 0.1698536892498409 VLLSDS(ph)NLHDA ddPTM_A549_MK2206_60min_R1 3 VLLSDSNLHDA 11 0 H3BV90;Q6FI81-3;Q6FI81;Q6FI81-2 H3BV90 CIAPIN1 Anamorsin 1 VLLS(0.28)DS(0.72)NLHDA;VLLS(0.111)DS(0.889)NLHDA;VLLS(0.012)DS(0.988)NLHDA 77.744 0.0011143 4854200.0 2023.64 2204.46 1732.75 1571.35 2585.3199999999997 1986.83 1888.78 2020.21 3081.2799999999997 2486.1800000000003 3217.9399999999996 True False 2365.1809587521234 2316.6575979900435 1978.4800051664795 1956.330820540583 2205.0228527526947 2197.075031848984 2231.946877235672 2306.580954133649 2383.374999793066 1924.5502112730003 2418.836687374103 0.9778175480378428 0.957756929222458 0.8179469145204358 0.8087899570699758 0.9116046834672723 0.9083188804425387 0.9227356641670096 0.953591024219862 0.985339362609249 0.7956511579797056 1.0 11.240097650809536 -8.315899254081595 1.1643892754129659 0.9950660068532154 0.8909744456039652 0.0 0.07652806465124827 0.3031332444659737 0.7995505693242856 0.00968371665330447 0.012414249344860311 4.831708731109388e-09 8.315899254081595 -0.10409156124925023 VLLSDS(ph)NLHDA ddPTM_A549_PD325901_60min_R1 2 VLLSDSNLHDA 11 0 H3BV90;Q6FI81-3;Q6FI81;Q6FI81-2 H3BV90 CIAPIN1 Anamorsin 1 VLLS(0.073)DS(0.927)NLHDA;VLLS(0.013)DS(0.987)NLHDA 75.695 0.0012966 4956200.0 2368.7799999999997 1950.58 2476.1000000000004 2257.2 2340.4 2268.9 2254.1000000000004 1815.6 2411.2 2810.2 2365.3 True False 2609.2568017963313 2114.962222161105 2644.1430359988844 2396.6221175268583 2176.0183779416825 2250.422830651398 2339.881008990848 1779.3864336893528 2309.8656491738675 2632.7634924082686 2074.3830948720724 1.2578471200649872 1.0195620217834136 1.2746647630012378 1.1553420983093088 1.0489954258308676 1.084863657158844 1.127988853541611 0.8577906550087306 1.11351931804878 1.2691790146750264 1.0 11.018466638810319 -6.730251094893281 4.825159581009398 1.0473461910462623 1.1745277003686752 0.14674510745573077 0.11311305340811417 0.18793323103384996 10.420736395274083 0.012755492990098023 0.02644665872447002 1.8610108498292728e-07 6.730251094893281 0.1271815093224129 VLLSPSIPSVGQDQT(ph)LSPGSKQESPPAAAVRPFTPQPSK ddPTM_A549_MK2206_60min_R1 1 VLLSPSIPSVGQDQTLSPGSKQESPPAAAVRPFTPQPSK 39 2 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VLLSPS(0.001)IPS(0.06)VGQDQT(0.316)LS(0.316)PGS(0.15)KQES(0.15)PPAAAVRPFT(0.007)PQPS(0.001)K 50.81 0.0016521 5163600.0 466.55 541.15 661.59 507.17 660.35 705.95 431.31 504.44 1032.6 947.75 889.74 True False 545.2922339476402 568.6922235614672 755.4134102542728 631.4266727677266 563.2133897603553 780.6531604283155 509.6734440329304 575.9459147827099 798.7177487233619 733.6526167590382 668.7930024252265 0.8153378279531354 0.8503262167804292 1.1295175151578096 0.9441287072053693 0.8421340948813599 1.1672567709253139 0.7620795106777657 0.8611721604355493 1.194267502541134 1.0969801031090531 1.0 9.385415942368105 -8.75357425306781 24.999814518666508 1.0917374338142372 0.9270433723836626 0.2765872830631393 0.1261569044695335 186.0630918640732 591412.8031217471 0.022535389260873832 0.025326756998942327 1.7637041911237392e-09 8.75357425306781 -0.16469406143057452 VLLSPSIPSVGQDQTLSPGS(ph)KQESPPAAAVRPFTPQPSK ddPTM_A549_PD325901_60min_R1 1 VLLSPSIPSVGQDQTLSPGSKQESPPAAAVRPFTPQPSK 39 2 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VLLSPSIPS(0.01)VGQDQT(0.037)LS(0.151)PGS(0.649)KQES(0.151)PPAAAVRPFT(0.001)PQPS(0.001)K 72.238 1.2960999999999998e-05 18890000.0 1934.6 1824.2 1762.5 2124.1 2361.6 1696.7 2401.4 2320.1 2081.9 1941.2 1609.6 True False 2130.999167822753 1977.931736030457 1882.113848773489 2255.300832818892 2195.7293630777135 1682.8826377390924 2492.7865910965015 2273.8237854167605 1994.4049830022707 1818.632300712736 1411.6294040950775 1.5096024223077347 1.4011692660216344 1.3332917572512701 1.5976578741391751 1.5554573719617877 1.192156123170232 1.7658930763733263 1.6107795564618401 1.4128389343666161 1.2883213507999765 1.0 10.46314567139444 -10.22597252605373 0.7730113696207486 1.0125673528766148 1.4883178194400606 0.34819035241094054 0.16641265195013913 0.32509168992634324 0.3727894852902139 0.08279227474214257 0.02995167379889279 5.943297553799218e-11 10.22597252605373 0.4757504665634458 VLMKS(ph)PQLLR ddPTM_A549_MK2206_60min_R1 1 VLMKSPQLLR 10 1 A0A0A0MS79;O14513 A0A0A0MS79 NCKAP5 Nck-associated protein 5 1 VLMKS(1)PQLLR 43.382 0.018947 3028000.0 844.58 969.07 887.2 828.93 1344.6 1011.5 1058.5 1016.8 1268.4 1363.9 1493.9 True False 987.1244560014961 1018.3915237673681 1013.018300726418 1032.0178872120819 1146.8111211808487 1118.5362586206415 1250.8157485540714 1160.9345138194028 981.1094252185864 1055.794042730311 1122.9234004574894 0.8790666002679546 0.906910946332106 0.9021259155466036 0.9190456684682394 1.0212727962687635 0.9960931067648421 1.1138923171825232 1.0338501391514572 0.8737100187055264 0.9402191122744177 1.0 10.133043803184922 -6.5415125828303955 21.506341029741037 0.9686344713983807 0.8993660356396479 0.3072218539775444 0.06041988370729272 69.44618543309312 80151.18724044522 0.0109467843236299 0.022794921584171526 2.8740043237731254e-07 6.5415125828303955 -0.06926843575873276 VLMKS(ph)PQLLR ddPTM_A549_PD325901_60min_R1 2 VLMKSPQLLR 10 1 A0A0A0MS79;O14513 A0A0A0MS79 NCKAP5 Nck-associated protein 5 1 VLMKS(1)PQLLR;VLMKS(1)PQLLR 67.51899999999999 0.0012669 9435000.0 3390.0 3206.3 3587.3 3573.9 4126.3 3929.5 3913.8999999999996 3921.7 3847.9 3991.5 4479.8 True False 3734.150304413899 3476.5061535108302 3830.7557501873102 3794.651686084196 3836.482922962213 3897.4994548215723 4062.845606268259 3843.478616985867 3686.1861444327 3739.476008806347 3928.8129997919555 0.9504525424375341 0.8848744273893727 0.9750415075469773 0.9658519472128443 0.9764992437067807 0.9920297695583777 1.0341152929608513 0.978279856330498 0.9382442342325523 0.9518080929289242 1.0 11.939877785954954 -5.78691366392677 22.758819698292044 0.9766771161954725 0.9176635668761923 0.4202453921329963 0.02771127981663564 57.401623723618904 51283.187958393355 0.004296501724011847 0.013370082216038914 1.6333766246140026e-06 5.78691366392677 -0.059013549319280156 VLNNMEIGTSLFDEEGAK ddPTM_A549_PD325901_60min_R1 2 VLNNMEIGTSLFDEEGAK 18 0 P00558;P00558-2 P00558 PGK1 Phosphoglycerate kinase 1 0 ; 136.99 3.5122e-13 4169100.0 2638.0 2383.3 2520.5 2211.63 2756.8 2916.8 3087.2 2867.0 2679.4 2977.2 2879.4 False True 2905.8078180070397 2584.149055192076 2691.556286997775 2348.2373621238376 2563.1718784436994 2893.0465478619585 3204.68508538066 2809.815435882011 2566.7941358644907 2789.2190839078685 2525.252054020481 1.1507001106605068 1.0233232168162478 1.0658564885483488 0.9299021689281209 1.015016253273746 1.1456466467400386 1.2690555306265157 1.1126871202454716 1.0164506674800522 1.104530963341708 1.0 11.302211680026263 -8.838994832984136 6.493460117875215 1.007345610524537 1.0860877603776362 0.02158165003487622 0.08803078271587515 0.31983449535654584 21.45968651769282 0.015725798291804677 0.016711198172414937 1.4487890904013036e-09 8.838994832984136 0.07874214985309913 VLNSYWVGEDSTYK ddPTM_A549_PD325901_60min_R1 2 VLNSYWVGEDSTYK 14 0 E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;P61313;E7ENU7 E7EX53 RPL15 Ribosomal protein L15;60S ribosomal protein L15 0 ; 161.1 9.171200000000002e-19 3438900.0 5297.700000000001 4627.3 4728.6 5224.4 5907.8 6252.2 5035.5 5281.2 5250.5 5200.6 6436.299999999999 False True 5835.518604039388 5017.258810510763 5049.511231381743 5547.0993225267275 5492.856508803571 6201.284156110305 5227.128708031332 5175.862322978747 5029.839744105589 4872.233228460049 5644.67590306731 1.0338093283386518 0.8888479864334444 0.8945617637033588 0.982713519391333 0.9731039661318305 1.098607654823997 0.9260281365650979 0.9169458817230215 0.8910768005958286 0.8631555313587593 1.0 12.462675033692165 -4.638869649117347 5.1363057647411665 0.9513357632649907 6.949162373319486 0.12868979193098473 0.06459340884853877 1980.9596386390058 501.93370391147664 0.00885781053204362 136117.179828353 2.2968379267867452e-05 4.638869649117347 5.997826610054495 VLNTGS(ph)DVEEAVADALK ddPTM_A549_MK2206_60min_R1 1 VLNTGSDVEEAVADALK 17 0 E3W994;J3KR49;O75122 E3W994 CLASP2 CLIP-associating protein 2 1 VLNT(0.204)GS(0.796)DVEEAVADALK 142.26 3.3809e-16 27380000.0 2428.9 3110.0 2798.2 1999.6 4096.7 3518.7 2674.4 3236.5 5539.5 4068.3 4023.8 True False 2838.838939096394 3268.2857161159804 3195.0268362180614 2489.5020897654554 3494.0808568656735 3891.046498475976 3160.3038620056786 3695.283786365553 4284.812094763765 3149.2682044429407 3024.5794087695604 0.938589653445823 1.0805752716029906 1.0563540923919208 0.8230903386260301 1.1552286730296537 1.2864752326204938 1.0448738270328082 1.2217512873529892 1.416663778884511 1.041225168468665 1.0 11.562518823059397 -6.960999935911666 15.344222856468967 1.197351534900493 0.988169456691487 0.3215682954141207 0.13007201791293815 3.2432662838061 1274.6007713765625 0.023725032504513403 0.04483451767367585 1.0939565277059813e-07 6.960999935911666 -0.20918207820900603 VLNTNIDGR ddPTM_A549_MK2206_60min_R1 2 VLNTNIDGR 9 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 RPS18 40S ribosomal protein S18 0 ; 99.802 0.0022041 5242200.0 3922.7 4358.3 3409.2 3169.3 5180.1 4094.6 3502.7 3693.2 6057.0 5657.799999999999 5709.200000000001 False True 4584.755859192814 4580.118854195586 3892.675823756205 3945.778642275283 4418.1141520369765 4527.887854224494 4139.095250316814 4216.722409950645 4685.099171041451 4379.699050487246 4291.448074095921 1.0683470427773227 1.0672665205579774 0.9070774611612363 0.9194515637024316 1.0295159292980005 1.0550955705501304 0.9644985046658864 0.9825873078608743 1.0917291995962135 1.0205643817349268 1.0 12.067248826747583 -8.729077944603214 24.999228585177203 1.0433166007395038 0.9974808353595365 0.08126126256534227 0.05604100460891343 341.13355791022366 263525.5013298117 0.010594807573147904 0.012012950536923464 1.86604475411117e-09 8.729077944603214 -0.045835765379967364 VLNTNIDGR ddPTM_A549_PD325901_60min_R1 2 VLNTNIDGR 9 0 P62269;A0A0G2JQH2;Q5GGW2 P62269 RPS18 40S ribosomal protein S18 0 ; 128.58 3.2719000000000003e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VLPAFRES(ph)PSGR ddPTM_A549_MK2206_60min_R1 1 VLPAFRESPSGR 12 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 VLPAFRES(0.889)PS(0.111)GR 41.542 0.026056 3158500.0 701.39 688.3 632.64 642.23 660.21 521.79 735.72 853.68 1075.0 1116.2 1236.9 True False 819.7674846608836 723.3315300329994 722.3578649363857 799.5763788308001 563.0939835748985 577.0054714638301 869.3908006860672 974.6917542853538 831.5142164222492 864.0496447654323 929.7435932966515 0.8817135074350784 0.7779903354517737 0.7769430950043711 0.859996653481301 0.605644381563631 0.6206070960036463 0.935086627059631 1.0483446848279176 0.8943478851775637 0.9293418647841563 1.0 9.860689091282604 -7.881891421981865 8.131305227897874 0.9576885306201776 0.7543733919047176 0.5858737402042006 0.087047086803588 0.14496393401777471 9.780112210102192 0.014395090162733994 0.019919557573407513 1.3125280032942604e-08 7.881891421981865 -0.20331513871545992 VLPAFRES(ph)PSGR ddPTM_A549_PD325901_60min_R1 2 VLPAFRESPSGR 12 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 VLPAFRES(0.797)PS(0.203)GR;VLPAFRES(0.988)PS(0.012)GR 68.262 0.00055597 4136500.0 829.52 725.5 890.99 887.95 578.72 905.47 1028.6 967.22 944.59 812.5 755.98 True False 913.7322597396511 786.6404311424714 951.4579393581215 942.7966548192337 538.0727036756155 898.0961525276217 1067.743935871517 947.9280383305888 904.892167200209 761.1986113378828 662.9992525520604 1.3781799243701296 1.1864876590953657 1.4350814660736146 1.4220176737608055 0.8115736203388323 1.354596025667617 1.6104753237073595 1.4297573257914873 1.3648464364281534 1.148113830306485 1.0 9.372863433657017 -10.649657409264503 0.9569822777097187 1.0031116534674753 1.3294761459935511 0.19442442547539418 0.19549891556049256 0.5812772751340893 0.9616126230912475 0.12630576848289288 0.0351437296043116 2.2404878377574998e-11 10.649657409264503 0.3263644925260758 VLPLIGSQEQKS(ph)PGSHK ddPTM_A549_MK2206_60min_R1 2 VLPLIGSQEQKSPGSHK 17 1 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 VLPLIGSQEQKS(0.999)PGS(0.001)HK;VLPLIGSQEQKS(0.999)PGS(0.001)HK 143.57 1.2666e-16 9527000.0 1576.48 2140.7 2321.0 2358.3 2776.6 1903.8899999999999 2212.6 2252.95 2698.2 2611.3999999999996 2402.1 True False 1842.5512827644968 2249.6524863310224 2650.152700615437 2936.0836058681107 2368.1658181397797 2105.3583761000996 2614.6007796417002 2572.3125618700055 2087.0620081400116 2021.482926303932 1805.5922754126334 1.020469187786826 1.2459360382547646 1.4677470305469686 1.626105542125852 1.3115728563906162 1.1660209255264788 1.4480571362901868 1.4246364458344578 1.1558877585821825 1.1195677749795208 1.0 10.818256436257661 -9.092087958564305 1.841298161184532 1.0527912463221107 1.3457480064106133 0.31774317627906845 0.15857816581397885 0.24011764880205938 1.6681813210077798 0.03343882631880571 0.03205206213680286 8.089320478969669e-10 9.092087958564305 0.2929567600885026 VLPLIGSQEQKS(ph)PGSHK ddPTM_A549_PD325901_60min_R1 2 VLPLIGSQEQKSPGSHK 17 1 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 VLPLIGSQEQKS(0.999)PGS(0.001)HK;VLPLIGSQEQKS(0.983)PGS(0.017)HK 167.16 4.405e-24 23793000.0 3453.1 3199.2 3871.0 3563.0 5411.9 4325.5 3989.5 4970.8 4312.6 3519.8999999999996 3266.7 True False 3803.6561699621343 3468.8078115933768 4133.709338213999 3783.0784178398894 5031.786814041446 4290.274562114956 4141.322605638167 4871.653494482837 4131.356419470479 3297.6529132901064 2864.9166093174626 1.3276673246235662 1.2107884049092044 1.4428724817923457 1.3204846540860293 1.7563466935396133 1.49752162005758 1.4455298950655304 1.7004521104170844 1.4420511948006516 1.1510467364269072 1.0 11.48427743094791 -10.42816104554917 0.857725212399051 1.0099388291001812 1.4614363028228667 0.4657573449355934 0.15595254185054128 0.3496023363547905 0.4789003820753191 0.09321604537405868 0.03014327885610825 3.73111774428115e-11 10.42816104554917 0.45149747372268556 VLPPPAGYVPIRT(ph)PAR ddPTM_A549_MK2206_60min_R1 4 VLPPPAGYVPIRTPAR 16 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR 180.77 2.5755999999999998e-30 124326900.0 10339.560000000001 11491.25 11151.7 10708.44 14370.91 11932.74 10470.89 10793.54 18031.43 17265.23 16531.68 True False 12084.62495002822 12076.10554190282 12733.17874685618 13332.008280720147 12256.968176029357 13195.454626488245 12373.315175604479 12323.557348829936 13947.33989527687 13365.002551776997 12426.407604843076 0.9724954576025938 0.9718098686217463 1.0246870335955778 1.0728771101572527 0.9863645685702696 1.0618881213380962 0.9957274514946778 0.9917232510566405 1.1223951715410514 1.075532283889361 1.0 13.601121662283145 -4.566827679400116 0.5068104195349464 1.0495041381072223 0.8203408986974118 0.22090735994926758 0.042381322477149125 9.051360624520495 0.9357035376701761 0.010018452266477958 1.4438843798813026 2.7112672028056424e-05 4.566827679400116 -0.22916323940981054 VLPPPAGYVPIRT(ph)PAR ddPTM_A549_PD325901_60min_R1 4 VLPPPAGYVPIRTPAR 16 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR 179.07 4.0003e-29 233257000.0 24597.0 25682.800000000003 26939.199999999997 27315.6 30104.0 28147.6 29404.300000000003 30839.2 30664.300000000003 32414.100000000002 32265.7 True False 27094.069332645642 27847.17968979443 28767.456110569492 29002.822573771326 27989.59889316205 27918.375277907053 30523.296727150377 30224.08796311564 29375.58610897572 30367.46819417507 28297.223449124354 0.9574815487236101 0.9840958332841715 1.0166176254815449 1.0249352776930771 0.9891288077604015 0.9866118252945052 1.078667551324542 1.0680937660705687 1.0381084264959832 1.0731607024545293 1.0 14.788372880921271 VLPPPAGYVPIRT(ph)PARK ddPTM_A549_MK2206_60min_R1 2 VLPPPAGYVPIRTPARK 17 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VLPPPAGY(0.003)VPIRT(0.997)PARK;VLPPPAGY(0.005)VPIRT(0.995)PARK 52.611999999999995 0.029293 4988400.0 2293.8999999999996 3113.1000000000004 3663.1000000000004 3141.7 4232.6 2595.3 2552.4 2993.6 4692.5 4119.1 4228.9 True False 2681.054239529506 3271.543492874809 4182.582661621889 3911.4166410362723 3609.990146891318 2869.932923379286 3016.138041199258 3417.951967515504 3629.6562423827027 3188.592449160806 3178.7474182975247 0.8434310395650834 1.0291926543276546 1.3157958501345788 1.230489915153797 1.1356643582662376 0.9028502569469222 0.9488448260587634 1.0752511973241625 1.14185110194338 1.0030971415994272 1.0 11.634242669855606 VLPPPAGYVPIRT(ph)PARK ddPTM_A549_PD325901_60min_R1 2 VLPPPAGYVPIRTPARK 17 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VLPPPAGY(0.001)VPIRT(0.999)PARK;VLPPPAGY(0.001)VPIRT(0.999)PARK 64.83 0.0048431 10798700.0 5078.5 5443.3 6176.200000000001 6248.5 6491.4 7454.0 5841.700000000001 6514.9 7224.5 5927.6 6178.799999999999 True False 5594.065581405896 5902.025994263008 6595.3540725076955 6634.4556536268765 6035.466458114268 7393.297095365823 6064.009090200894 6384.955208659819 6920.8793888755 5553.330324389453 5418.846770640321 1.032335073897074 1.0891664304369308 1.2171139638496093 1.2243298130467182 1.1137916818048508 1.3643672553029564 1.1190589708231107 1.1782867238937147 1.2771867671869397 1.0248177443358932 1.0 12.403770137107525 -4.132165242861218 12.677741971843561 1.151629799817019 1.1631555014764055 0.0 0.10913053739621144 0.0 0.0 0.015947265551695157 0.0 7.376235214916412e-05 4.132165242861218 0.011525701659386378 VLPQGPPT(ph)PAK ddPTM_A549_MK2206_60min_R1 2 VLPQGPPTPAK 11 0 H3BPZ6;Q8IWY9-1;Q8IWY9 H3BPZ6 CDAN1 Codanin-1 1 VLPQGPPT(1)PAK;VLPQGPPT(1)PAK 125.54 3.1118e-06 16580900.0 4183.6 5060.0 5274.3 4336.3 6441.5 4745.9 4502.6 4692.3 7004.4 7200.4 8083.1 True False 4889.689400800232 5317.532386992558 6022.275049054722 5398.693694663903 5493.963883003453 5248.107987926542 5320.664137401575 5357.447894566071 5417.914583728373 5573.824639105013 6075.843187788964 0.8047754442753515 0.8751924996483722 0.9911834230939499 0.8885505316388063 0.9042306908191847 0.8637662009569341 0.8757079425773984 0.8817620417415148 0.8917140249137971 0.9173746699564446 1.0 12.56886892028243 -10.531273272169491 0.7071076446490322 1.0052884855634028 0.8877871853482061 0.18541961105103033 0.04771896198052462 0.527882811454387 0.44413637377952736 0.03531199862048029 0.008466162604801514 2.942569491012694e-11 10.531273272169491 -0.11750130021519667 VLPQGPPT(ph)PAK ddPTM_A549_PD325901_60min_R1 2 VLPQGPPTPAK 11 0 H3BPZ6;Q8IWY9-1;Q8IWY9 H3BPZ6 CDAN1 Codanin-1 1 VLPQGPPT(1)PAK;VLPQGPPT(1)PAK 115.37 2.2375e-05 27986000.0 7900.700000000001 7807.4 7260.4 8172.700000000001 9154.5 8347.400000000001 8109.9 8694.5 8734.1 8627.8 9316.4 True False 8702.773247812062 8465.35699807268 7753.13440433193 8677.509117451607 8511.519501310515 8279.421541971647 8418.526682407557 8521.081376796694 8367.036150650914 8083.039235570441 8170.541861525454 1.0651402802050192 1.036082690908848 0.9489131242128422 1.0620481804656592 1.041732561385029 1.0133258824557159 1.0303510862663647 1.0429028479643323 1.0240491135662297 0.9892904745562767 1.0 12.99621604418518 -10.2288732811655 0.7876161303982248 1.000813500224063 1.0284398549038918 0.16010768702698142 0.029660066514110153 1.0553302837807998 1.2595039277384672 0.015693454722931613 0.005753600008290528 5.903733146999482e-11 10.2288732811655 0.02762635467982877 VLPS(ph)PARPFPASLGR ddPTM_A549_PD325901_60min_R1 3 VLPSPARPFPASLGR 15 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 VLPS(1)PARPFPASLGR;VLPS(1)PARPFPASLGR;VLPS(0.999)PARPFPAS(0.001)LGR 79.311 0.0001274 10351900.0 2721.73 2887.6099999999997 3026.7799999999997 2799.9300000000003 3288.3500000000004 3772.19 3068.16 2797.87 2933.83 3374.99 3327.69 True False 2998.0380259682734 3130.959028768174 3232.1954923067346 2972.8753169975976 3057.3876401916486 3741.4705353056074 3184.920507761572 2742.064287963446 2810.53132776865 3161.892555420603 2918.4052259649266 1.0272864094728371 1.0728321759131203 1.1075211432429017 1.0186643343933368 1.0476227266145912 1.2820257111719455 1.0913222329186743 0.9395762670541491 0.9630366964681508 1.0834316383788585 1.0 11.510964502702178 -8.246742453662904 22.929956571012937 0.9788347367596483 1.0950188792271198 0.26479889294148573 0.07475849853378147 209.37658226087296 326666.0721573892 0.011081603999339475 0.014265549261220648 5.665751811817429e-09 8.246742453662904 0.11618414246747155 VLPSEQES(ph)TKKPYRIESDEEEDFENVGK ddPTM_A549_MK2206_60min_R1 1 VLPSEQESTKKPYRIESDEEEDFENVGK 28 3 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 VLPS(0.231)EQES(0.256)T(0.256)KKPYRIES(0.256)DEEEDFENVGK 86.785 6.5611e-10 5065700.0 842.99 1369.1 1140.1 790.69 1311.9 1240.9 1028.1 922.07 1463.3 1857.5 1359.8 True False 985.2661028732642 1438.7813421010903 1301.783323555218 984.4090854954234 1118.9212478634215 1372.2112143572458 1214.892462058046 1052.776246220945 1131.8648864099316 1437.8894599102232 1022.1241314292078 0.9639397726532433 1.407638561560309 1.2736058992511707 0.9631013056300232 1.0947019187374678 1.3425093608136627 1.1885958120950493 1.0299886421318292 1.1073653890034632 1.4067659843816254 1.0 9.997354699061416 -9.440638728193452 0.40063086279184107 0.9920612808439796 1.1886542353990759 0.0 0.18146027474420795 1.46343848259594 0.5575501992387171 0.11182076762182432 0.05678000549643355 3.6254445891168957e-10 9.440638728193452 0.1965929545550963 VLPSEQESTKKPYRIES(ph)DEEEDFENVGK ddPTM_A549_PD325901_60min_R1 1 VLPSEQESTKKPYRIESDEEEDFENVGK 28 3 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 VLPS(0.009)EQES(0.007)T(0.007)KKPYRIES(0.976)DEEEDFENVGK 90.485 3.1900999999999997e-10 9101500.0 1302.9 1348.3 1526.9 1874.2 1853.9 2568.9 2110.7 1938.6 1867.2 1650.2 1785.0 True False 1435.1694488557137 1461.9259728592606 1630.5246159955975 1989.965077382971 1723.6884596077957 2547.9797301160806 2191.0238435193573 1899.9331021977207 1788.7280773629077 1546.0060903751062 1565.4563160472874 0.9167738723488991 0.9338657092333074 1.0415650690992164 1.2711725373516336 1.101077329299126 1.6276274872681369 1.3996071439742261 1.2136608877052368 1.1426240764605762 0.987575363507241 1.0 10.612367535392737 -5.957505346654578 3.7194918579073644 1.1564752281530293 0.9278134036090203 0.2504869328676679 0.17958989701423647 0.3090753014921271 8.993346840199917 0.028383815307613657 0.09537789203531127 1.1027946571207586e-06 5.957505346654578 -0.22866182454400896 VLQATVVAVGSGSK ddPTM_A549_MK2206_60min_R1 1 VLQATVVAVGSGSK 14 0 P61604;B8ZZL8;S4R3N1 P61604;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 120.14 6.5852e-06 4318700.0 1090.1 1142.5 1268.8 1190.2 1823.4 1117.6 1271.5 940.56 1958.2 1492.6 1329.6 False True 1274.0822296138083 1200.6483699879445 1448.7349188026137 1481.7990534301086 1555.1802754433736 1235.8636901971604 1502.5150914374146 1073.887260344195 1514.6708266028347 1155.4206233442794 999.4236249068055 1.2748170023823624 1.2013407928994104 1.4495704150857007 1.482653618047386 1.5560771595612337 1.2365764220476603 1.5033816031490366 1.0745065791739046 1.5155443486180098 1.156086963075363 1.0 9.964952511443727 -10.941612087573683 1.0887895509260792 0.9905858626128443 1.3777639026024298 0.33023551440472 0.15271292176427606 0.3765846212895226 0.7603874102930008 0.1155040589235209 0.02442350342503793 1.1438996113193061e-11 10.941612087573683 0.38717803998958544 VLQATVVAVGSGSK ddPTM_A549_PD325901_60min_R1 2 VLQATVVAVGSGSK 14 0 P61604;B8ZZL8;S4R3N1 P61604;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 ; 160.69 9.777600000000002e-19 6208400.0 9481.0 9301.3 10581.400000000001 10280.5 12945.400000000001 11913.3 11434.1 12780.599999999999 11887.900000000001 11745.2 11277.8 False True 10443.50414045669 10085.15319391519 11299.517435127256 10915.50313629049 12036.159763205545 11816.282034642027 11869.230932479597 12525.680906813259 11388.292904285834 11003.60606755163 9890.702095864475 1.055891082274468 1.0196599893684009 1.1424383552965203 1.1036125676916815 1.2169166199271266 1.1946858696292835 1.2000392709676686 1.2664096830952505 1.1514140041734282 1.1125202195860782 1.0 13.271857219627273 -4.076033896668147 16.05401769737894 1.1098260992028608 1.1182906812802516 0.0 0.08381042471281835 0.0 0.0 0.013376686795469253 0.0 8.393944692555404e-05 4.076033896668147 0.008464582077390759 VLQLYPNNK ddPTM_A549_MK2206_60min_R1 1 VLQLYPNNK 9 0 Q02790;H0YFG2 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 0 65.252 0.016357 1510600.0 2413.3 2945.7 2626.5 2741.0 3676.4 2504.8 2547.6 2524.7 4023.2 3723.1 3436.7 False True 2820.606040479777 3095.6235478980198 2998.977194384509 3412.545123048164 3135.6064300976304 2769.8562734483244 3010.465943331465 2882.5839565694764 3111.951623730226 2882.0491241947498 2583.272541905248 1.0918731936814874 1.1983340889052674 1.1609217168284787 1.321016295296237 1.2138116978493558 1.0722276602705902 1.165369079141432 1.115865209655144 1.2046547831283259 1.1156581728961297 1.0 11.334984144189573 -10.944327659483381 0.6815497994763515 0.969065880157273 1.177218368500684 0.2024575984643826 0.07288120807171744 0.754515830957236 0.46505960022588766 0.09711344392944547 0.012893378114442154 1.1367693108668302e-11 10.944327659483381 0.20815248834341105 VLQLYPNNK ddPTM_A549_PD325901_60min_R1 2 VLQLYPNNK 9 0 Q02790;H0YFG2 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 0 ; 132.69 2.3512e-09 2682800.0 3772.4 4790.5 4369.2 4350.3 5606.8 5236.3 4939.4 4704.3 4793.0 5184.1 5662.6 False True 4155.371270905899 5194.212247261209 4665.720186133969 4619.008150751862 5212.997710409943 5193.657308889735 5127.371569943392 4610.4690460480415 4591.566878106478 4856.7750412759615 4966.136098178918 0.8367413193588621 1.045926278413096 0.9395071125507191 0.9301009999395007 1.0497089905211316 1.0458145339178782 1.0324669861189668 0.9283815334297223 0.9245753212019714 0.977978642803797 1.0 12.277908084130383 -5.241465548817205 23.81526382503025 0.9763133617487548 0.8367410667981735 0.4160060573482882 0.04976756900788687 2115.9494472441984 2522821.9626756385 0.007383913338822558 0.37906453059718564 5.735013587576468e-06 5.241465548817205 -0.13957229495058132 VLQSALAAIR ddPTM_A549_PD325901_60min_R1 2 VLQSALAAIR 10 0 B4DY09;Q12905 B4DY09 ILF2 Interleukin enhancer-binding factor 2 0 ; 96.34200000000001 2.2507e-06 2117600.0 1415.8 1557.3 1222.6 896.34 1451.3 1300.8 1288.2 1269.0 1537.9 1801.4 1655.4 False True 1559.5309737431267 1688.5391363448246 1305.572988091045 951.7048860641609 1349.3656947131967 1290.2067160788652 1337.2231559300883 1243.6887994887584 1473.2674111913113 1687.659296571153 1451.7962944451974 1.0742078483807538 1.1630689118063207 0.899281113394747 0.6555361035880409 0.929445611533852 0.888696796524003 0.9210818081341824 0.8566551686674699 1.0147893453291388 1.162462876526414 1.0 10.50362332366334 -8.789068252012232 24.470457016320022 1.006983883146979 0.9207010034610217 0.14876117054076388 0.1288282759628527 322.9248717592246 286007.80915276846 0.022069721838536224 0.02349789242595386 1.6252933109759233e-09 8.789068252012232 -0.08628287968595738 VLQSFTVDSSK ddPTM_A549_MK2206_60min_R1 1 VLQSFTVDSSK 11 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 124.1 1.5255e-05 1164200.0 1925.9 2181.6 2289.2 1990.8 2939.1 2004.1 2346.3 2564.3 3410.2 2978.8 3016.9 False True 2250.9448362656954 2292.6341216329965 2613.8429824424197 2478.5460893704067 2506.762283402228 2216.172531786087 2772.5923390008697 2927.7973778393903 2637.795144970374 2305.887011133551 2267.7204677958366 0.9926024253128312 1.0109862102454696 1.1526301497745906 1.0929680816346323 1.1054106178433596 0.9772688315240842 1.222634084921302 1.2910750771170358 1.1631923697960183 1.0168303562452787 1.0 11.14702710105379 -5.6601877249369 6.897536299073658 1.1024730149851416 0.9980119590723044 0.17763930766265768 0.09040557360332521 0.33024394483076114 19.383532810255762 0.013862717918527135 0.05458834611548634 2.186816162562899e-06 5.6601877249369 -0.10446105591283716 VLQSFTVDSSK ddPTM_A549_PD325901_60min_R1 2 VLQSFTVDSSK 11 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 0 ; 180.97 4.7156000000000005e-18 6398800.0 7606.099999999999 8597.2 9283.7 8587.0 11172.8 10697.3 9523.4 10298.8 10459.400000000001 9666.4 10421.900000000001 False True 8378.265672685127 9321.716215876024 9913.747709423222 9117.399487508039 10388.061072067521 10610.184735478517 9885.818198404437 10093.382354747695 10019.827791543272 9056.061854321852 9140.072369867352 0.9166520059847972 1.019873348772107 1.0846465222864639 0.9975193979388981 1.1365403523843522 1.160842530137702 1.0815908012933937 1.1043000477789628 1.0962525662899854 0.9908085502886758 1.0 13.157989873056525 -5.308590465500639 2.3835987220381107 1.065256503773819 0.8899916303541504 0.41348841026392913 0.053842123909268264 0.4210141894266294 3.08220878995871 0.008133705604606196 0.1448076418639018 4.913710147380182e-06 5.308590465500639 -0.17526487341966868 VLRPPGGGS(ph)NFSLGFDEPTEQPVRK ddPTM_A549_MK2206_60min_R1 2 VLRPPGGGSNFSLGFDEPTEQPVRK 25 2 Q9UK76;J3KT51;Q9UK76-2 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 VLRPPGGGS(0.969)NFS(0.03)LGFDEPT(0.001)EQPVRK;VLRPPGGGS(0.861)NFS(0.139)LGFDEPTEQPVRK 58.688 0.00029351 7962400.0 2816.5 2844.3 2698.4 2510.84 3847.1 3490.5 2939.6 2487.6 4321.8 4601.0 4397.9 True False 3291.8563431862144 2989.062721012438 3081.0736955367065 3125.9959127158904 3281.1966862225545 3859.8623931936213 3473.687269201277 2840.224917955494 3342.919200496444 3561.6309044667205 3305.7800541348083 0.995788070978534 0.9041928597983323 0.9320262222778424 0.9456152138149521 0.992563519801777 1.167610164616299 1.0507920104534643 0.8591693553244698 1.0112346090040631 1.0773950009202513 1.0 11.690775024608463 -6.800372818987096 4.865671940320951 1.0097497693650985 0.9402407537637459 0.19919291974935038 0.0729425755382297 0.2716039994227106 14.73276378293174 0.0102604261346756 0.020237114094310622 1.5835332287662809e-07 6.800372818987096 -0.06950901560135259 VLRPPGGGS(ph)NFSLGFDEPTEQPVRK ddPTM_A549_PD325901_60min_R1 2 VLRPPGGGSNFSLGFDEPTEQPVRK 25 2 Q9UK76;J3KT51;Q9UK76-2 Q9UK76 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 VLRPPGGGS(0.969)NFS(0.031)LGFDEPTEQPVRK;VLRPPGGGS(0.983)NFS(0.017)LGFDEPTEQPVRK 83.165 4.1629e-07 15427200.0 4299.2 4533.299999999999 4644.7 4535.3 5879.7 4970.3 5327.1 5617.4 5570.7 5204.4 5902.799999999999 True False 4735.651619096237 4915.337100617733 4959.917272850055 4815.435180586377 5466.730155863833 4929.823524697716 5529.8257056009725 5505.35655023495 5336.582851631081 4875.79329581154 5176.793020932173 0.9147848098132961 0.9494946158254246 0.9581061581552153 0.9301965833123599 1.0560070943070952 0.9522929552648048 1.0681952481471297 1.0634685466415679 1.0308665674004744 0.9418559475135375 1.0 12.337842922033397 -6.749983804336484 24.988319301726925 1.0203739713655224 0.9403819303526042 0.4612299060017795 0.040334041922632076 121.74609207061901 265565.82574710104 0.00467080659268516 0.009656165626166623 1.7783457266816165e-07 6.749983804336484 -0.07999204101291824 VLS(ph)DS(ph)EDEEKDADVPGTSTR ddPTM_A549_PD325901_60min_R1 1 VLSDSEDEEKDADVPGTSTR 20 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 2 VLS(1)DS(0.999)EDEEKDADVPGTSTR 89.565 1.2319e-06 16453000.0 5628.6 4858.2 4855.9 6041.5 6812.0 5834.4 5266.9 6102.3 5758.8 6275.7 6108.6 True False 6200.011328443679 5267.617563854384 5185.450574898824 6414.669733757986 6333.54862012423 5786.886580789154 5467.334761658267 5980.584839338259 5516.777662766452 5879.45123098234 5357.280925605857 1.1573056209932686 0.9832632704917684 0.9679258278419288 1.1973741573077108 1.1822319396864496 1.08019098888952 1.0205428532833498 1.1163470653094252 1.0297719569638877 1.097469278282701 1.0 12.387285234882777 -9.019598194078263 1.1183704364913722 1.0075715201793607 1.0868780922847132 0.00531132373692933 0.07725449789329719 0.5712126490235219 1.4634661579480837 0.0171699524622562 0.01617332052832893 9.558765466868506e-10 9.019598194078263 0.07930657210535252 VLS(ph)DSEDEEKDADVPGTSTR ddPTM_A549_MK2206_60min_R1 1 VLSDSEDEEKDADVPGTSTR 20 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 VLS(1)DSEDEEKDADVPGTSTR 118.67 7.9108e-15 4819300.0 1583.3 2454.5 1638.8 1592.5 2587.8 1895.4 1808.2 2494.3 2510.7 2862.3 2579.6 True False 1850.522332031505 2579.4235659828532 1871.2064824509168 1982.6625714900429 2207.1380480379303 2095.9699699353073 2136.726534280089 2847.874663473382 1942.0304587640367 2215.7044420463144 1939.0141266618514 0.9543624806990492 1.3302757986727574 0.9650298348637252 1.022510637869016 1.1382784775465629 1.0809462092695872 1.1019654291836507 1.4687230094482076 1.00155560089053 1.142696389665198 1.0 10.921107598880777 -8.923758470866067 24.999594952151945 1.0006445556527293 1.1342358908565355 0.034571411012481956 0.15010848396963902 47.900509370329864 15704.96037885834 0.02368142179190323 0.025210736085603612 1.1919046912612895e-09 8.923758470866067 0.13359133520380628 VLS(ph)GHLLGRPR ddPTM_A549_MK2206_60min_R1 1 VLSGHLLGRPR 11 1 B8ZZ81;O00116 B8ZZ81 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal 1 VLS(1)GHLLGRPR 54.65 0.0051667 2333500.0 537.7 563.51 484.86 490.5 851.2 573.48 517.01 525.19 582.25 931.11 821.45 True False 628.4506144971518 592.1902520541855 553.620438785179 610.6725220193819 725.9896075778216 634.1652729547852 610.944024714162 599.6372908269198 450.37130466219025 720.7716043160203 617.4612941333448 1.0177975858053279 0.9590726701102307 0.8966075186335826 0.9890053479004032 1.1757653710048412 1.027052673552414 0.989445055939368 0.9711334079143495 0.7293919617978996 1.1673146335879718 1.0 9.270204893254157 -8.541182259256434 24.911895926959748 0.8710575840616358 1.006154328429477 0.0 0.12380124099747081 257.81094349188334 350890.6450512356 0.019464638768761363 0.022072502536013457 2.876191117638534e-09 8.541182259256434 0.13509674436784114 VLS(ph)GHLLGRPR ddPTM_A549_PD325901_60min_R1 2 VLSGHLLGRPR 11 1 B8ZZ81;O00116 B8ZZ81 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal 1 VLS(1)GHLLGRPR;VLS(1)GHLLGRPR 79.492 0.00026732 9685500.0 1548.58 1619.5 1562.43 1520.4 2164.1000000000004 1481.0900000000001 1462.67 1788.17 2052.35 2002.77 2313.8 True False 1705.7907015956564 1755.9809486357435 1668.465895454844 1614.3116549210695 2012.1010817397005 1469.0284940938243 1518.3327072537347 1752.5035465577716 1966.0968667393781 1876.3147604051323 2029.2172683866727 0.8406151121273691 0.8653489086616312 0.8222214158375245 0.7955341599298169 0.9915651286268717 0.723938494403694 0.74823565268636 0.8636352419527249 0.9688942122508752 0.9246495136998784 1.0 10.986707627451452 -8.732316500925917 3.4271878698199685 0.9866340678325879 0.8279305437193525 0.4312381640861487 0.06795093021235346 0.12930713763869034 3.1133516006709416 0.0113783530272927 0.012532164589163775 1.852181316683221e-09 8.732316500925917 -0.1587035241132354 VLS(ph)IGDGIAR ddPTM_A549_MK2206_60min_R1 2 VLSIGDGIAR 10 0 P25705-2;P25705;P25705-3;K7EK77;K7EJP1;K7ERX7;K7EQH4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 1 VLS(1)IGDGIAR;VLS(1)IGDGIAR 97.81299999999999 0.00050756 5887800.0 1129.73 1154.98 907.44 1052.88 1669.49 1123.92 845.3299999999999 1372.46 1415.13 1491.67 1527.52 True False 1320.400804753333 1213.7635486815548 1036.128637073017 1310.83564726558 1423.9102325600304 1242.852468402285 998.915518871246 1567.0104079824714 1094.6053144982482 1154.7007109901929 1148.1946265926924 1.1499799547674843 1.0571061042877725 0.9023980892052812 1.1416493483822778 1.240129678002007 1.0824405894412632 0.8699879756758335 1.364760269461136 0.9533273272202358 1.005666360255323 1.0 10.165151493767278 VLS(ph)IGDGIAR ddPTM_A549_PD325901_60min_R1 4 VLSIGDGIAR 10 0 P25705-2;P25705;P25705-3;K7EK77;K7EJP1;K7ERX7;K7EQH4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 1 VLS(1)IGDGIAR;VLS(1)IGDGIAR;VLS(1)IGDGIAR;VLS(1)IGDGIAR 102.52 0.00039631 10021200.0 1940.9700000000003 2310.98 2045.27 2238.91 2003.37 1613.75 1855.37 1804.08 2035.3600000000001 2262.48 2563.74 True False 2138.015845533407 2505.734394985015 2184.074321407632 2377.2023857664626 1862.6602024513024 1600.6081550371068 1925.9771206474195 1768.096209126618 1949.8208973550604 2119.6266266827483 2248.416232886875 0.9508985988720966 1.1144441844594557 0.9713834518101523 1.0572786083803671 0.8284321093251148 0.7118824938307757 0.856592784056955 0.7863740633363309 0.8671974827594843 0.9427198557276176 1.0 11.134693420548103 -6.7519645546851565 24.999177705671748 0.8945047755144959 1.026274457640024 0.42497550225261604 0.08658963646355249 214.57660114670776 566152.7079078282 0.014861013425782353 0.03061870355335317 1.7702534331666137e-07 6.7519645546851565 0.1317696821255281 VLS(ph)LQGR ddPTM_A549_MK2206_60min_R1 1 VLSLQGR 7 0 Q8N5J2-2;Q8N5J2-4;Q8N5J2;Q8N5J2-3 Q8N5J2-2 FAM63A Protein FAM63A 1 VLS(1)LQGR 58.433 0.032754000000000005 1785900.0 789.2 1000.9 677.85 710.47 1172.3 927.04 774.37 792.19 1256.9 1609.3 1502.8 True False 922.3976659125019 1051.8415348104456 773.97932275406 884.5351818942102 999.8562229364196 1025.138757480651 915.0630053923638 904.4853584801267 972.2141568568608 1245.7580122926092 1129.6132848299853 0.8165605683818858 0.9311518808569564 0.6851719372887415 0.7830424745999148 0.8851314306974576 0.907513014628667 0.8100674962671736 0.8007035422005134 0.8606610509216752 1.1028181316760137 1.0 10.141613245315154 -10.380667182912445 0.4961242225992432 1.0233009088316622 0.8234802416055669 0.5674873731362093 0.07136410810306405 0.8373894728581307 0.32954780978550907 0.07792154625830557 0.016798119035513547 4.16229461450192e-11 10.380667182912445 -0.19982066722609537 VLS(ph)LQGR ddPTM_A549_PD325901_60min_R1 2 VLSLQGR 7 0 Q8N5J2-2;Q8N5J2-4;Q8N5J2;Q8N5J2-3 Q8N5J2-2 FAM63A Protein FAM63A 1 VLS(1)LQGR;VLS(1)LQGR 66.50399999999999 0.024222999999999998 10006000.0 2641.7 3147.9 3074.5 3480.2 3781.2 3451.9 3085.0 3186.5 3829.2999999999997 3694.2 4674.8 True False 2909.8834392832464 3413.184580556011 3283.1540584704044 3695.164049892335 3515.621556431847 3423.7888708737974 3202.401363176777 3122.94275773911 3668.3678377494566 3460.9475815438855 4099.829235998798 0.7097572293335632 0.8325187182398569 0.8008026357884548 0.9012970631671007 0.8575043871492791 0.8351052382404156 0.7811060360899665 0.7617250812101936 0.8947611294487905 0.8441687158954881 1.0 12.001348105244452 -9.50487673308061 0.9293119775157148 0.9814113136562886 0.8155574693112919 0.2072575616761474 0.06620196645545867 0.22700967506630307 0.4141569597879538 0.016210626764047897 0.011342646188832286 3.1269667761998586e-10 9.50487673308061 -0.16585384434499673 VLS(ph)PEELEDR ddPTM_A549_MK2206_60min_R1 2 VLSPEELEDR 10 0 A0A494C179;A0A0A0MRH8;A0A494C1P7;A0A0A0MSH9;A0A494C1F7;Q86WJ1-5;Q86WJ1-3;Q86WJ1-4;Q86WJ1-2;Q86WJ1 A0A494C179 CHD1L Chromodomain-helicase-DNA-binding protein 1-like 1 VLS(1)PEELEDR;VLS(1)PEELEDR 76.143 0.0014941 13322800.0 519.49 593.67 703.75 588.06 867.1099999999999 809.25 848.8399999999999 987.3299999999999 847.71 1286.6 1144.54 True False 607.1672116889068 623.8852672304099 803.5523322094414 732.134726399016 739.5592676536708 894.884297863325 1003.0632404370698 1127.287051071312 655.705038514702 995.9561664174921 860.3191303029752 0.7057464960416295 0.7251788845038221 0.9340165804827071 0.8510036573767493 0.8596336424522178 1.040177146297069 1.165919953545407 1.310312663481422 0.7621648937223853 1.1576589794844503 1.0 9.748728108080366 -5.7537444983259105 4.8619397688224195 0.9409534602075196 0.7097045369067074 0.2528369886684373 0.1634999824100747 0.21406069226852656 13.280008999824041 0.023920329867680896 0.09023916399822508 1.7630129471789213e-06 5.7537444983259105 -0.23124892330081215 VLS(ph)PEELEDR ddPTM_A549_PD325901_60min_R1 2 VLSPEELEDR 10 0 A0A494C179;A0A0A0MRH8;A0A494C1P7;A0A0A0MSH9;A0A494C1F7;Q86WJ1-5;Q86WJ1-3;Q86WJ1-4;Q86WJ1-2;Q86WJ1 A0A494C179 CHD1L Chromodomain-helicase-DNA-binding protein 1-like 1 VLS(1)PEELEDR;VLS(1)PEELEDR 134.75 7.2622e-07 18291100.0 772.75 707.1700000000001 747.82 738.13 1018.3399999999999 904.79 1022.12 940.0699999999999 1138.35 1113.1599999999999 1125.24 True False 851.1990111315165 766.7656977133313 798.5715622069728 783.7226136851408 946.8153114822818 897.4216902221679 1061.0173359255255 921.3195663793514 1090.509108218759 1042.874887626926 986.8426134840613 0.8625478870702055 0.7769888402024459 0.8092187662910147 0.7941718395380165 0.9594390215269863 0.9093868444268011 1.0751636800316002 0.9336033464613167 1.1050486605647294 1.0567793418902351 1.0 9.946676204698072 -7.210591807765212 1.0656727404002886 1.0440946982146861 0.8030377741276358 0.7439497550776812 0.056003946563667195 0.17885947675613562 0.39963950399378495 0.00975962512690854 0.022316448537894152 6.157553476362639e-08 7.210591807765212 -0.24105692408705037 VLS(ph)PGVSHR ddPTM_A549_MK2206_60min_R1 2 VLSPGVSHR 9 0 Q14676;Q14676-2;Q14676-3;Q14676-4;A2AB07;A2AB05 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 VLS(1)PGVSHR;VLS(1)PGVSHR 70.942 0.0010231 6014300.0 471.43999999999994 511.42 426.96 420.17999999999995 649.0 288.89 416.2 404.43 827.4300000000001 830.49 581.12 True False 551.0075463986183 537.4490935485642 487.509348149404 523.124118862597 553.5329597251015 319.4601480503382 491.8181526199387 461.7591910149301 640.018426134197 642.8817321996455 436.8118659039134 1.261429895587646 1.230390324760061 1.1160625115816856 1.1975959439198705 1.2672113624469705 0.7313449404339457 1.1259267227143623 1.0571122880542454 1.4652038465342043 1.471758856342657 1.0 8.770868237076936 -11.34113207594429 1.9776518271092443 0.9987101457727932 1.2081836957624994 0.0 0.2242135172102106 0.594084178553436 4.19789892977184 0.1558367799395977 0.029816581918794487 4.558982488692628e-12 11.34113207594429 0.20947354998970624 VLS(ph)PGVSHR ddPTM_A549_PD325901_60min_R1 2 VLSPGVSHR 9 0 Q14676;Q14676-2;Q14676-3;Q14676-4;A2AB07;A2AB05 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 VLS(1)PGVSHR;VLS(1)PGVSHR 88.596 0.00034248 7284600.0 429.28 328.92 490.63 492.89 530.78 403.3 336.56 575.34 651.84 482.25 561.43 True False 472.8601895807667 356.6392427448405 523.9271021978648 523.3346958655915 493.49984389159374 400.015658513689 349.3679749726986 563.8643923545012 624.4454316346605 451.80065269870005 492.377669197999 0.9603607538720774 0.7243205065041765 1.0640756780283203 1.0628725236829206 1.0022790933947565 0.8124163290452382 0.7095528429259611 1.1451867694831532 1.2682245168668551 0.9175896490890983 1.0 8.943621522539717 -8.305044270786384 24.849331516350258 1.1315900773135819 0.9105229282173686 0.23927873052375503 0.14281044912153265 375.71119676011426 214107.4383101566 0.02463299182447085 0.029779931728329198 4.953996885475231e-09 8.305044270786384 -0.22106714909621328 VLS(ph)PLIIK ddPTM_A549_MK2206_60min_R1 2 VLSPLIIK 8 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 VLS(1)PLIIK;VLS(1)PLIIK 120.22 0.0012058 205541000.0 28691.0 31840.0 30001.0 30029.0 42214.0 33559.0 33203.0 31180.0 48150.0 47898.0 46507.0 True False 33533.33937239685 33460.52000036425 34255.592921656076 37386.10634805304 36004.37652054768 37110.19110533868 39235.55531340659 35599.860484745244 37244.10187975003 37077.80853339425 34958.028372097506 0.959245727918746 0.9571626764589355 0.9799063195737293 1.0694569484900802 1.0299315549868178 1.0615641909301432 1.1223617904241787 1.0183600775711947 1.0653948066898762 1.060637863747164 1.0 15.09333619888426 -6.106616206145697 4.725228180731146 1.0412406419404068 0.9602418525247073 0.5885253896608651 0.031855698747549316 0.14790427475354317 5.212116721168369 0.005125281501435862 0.01427314535158721 7.823188484535453e-07 6.106616206145697 -0.08099878941569949 VLS(ph)PLIIK ddPTM_A549_PD325901_60min_R1 1 VLSPLIIK 8 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 VLS(1)PLIIK 101.65 0.0022794 79437000.0 3876.2 3432.9 2828.4 3424.1 5085.6 3676.7 3949.0 4303.8 4255.0 3442.6 4533.5 True False 4269.708970492379 3722.2025307635968 3020.3522325508857 3635.598880304679 4728.405000367556 3646.758174205998 4099.281355975714 4217.957332734217 4076.177147161083 3225.2336484822076 3975.9082402243002 1.073895249215184 0.9361892442853785 0.759663465568434 0.9144071393608363 1.1892641164426883 0.9172138675917396 1.0310301717990489 1.0608789433471084 1.0252191199792695 0.8111941859856043 1.0 11.957068746064058 -6.578048016857941 24.99999698322157 1.021516708863012 0.9099554986769371 0.10289631603254834 0.1109965413126456 88.12577331309566 39933.89089337236 0.012251369826949554 0.02550326307198025 2.642116621093311e-07 6.578048016857941 -0.11156121018607479 VLS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 VLSPLR 6 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(1)PLR;VLS(1)PLR 67.032 0.05524199999999999 5814800.0 800.48 1179.25 1054.54 888.72 1537.5700000000002 1700.8600000000001 1118.74 1223.51 1716.5900000000001 1621.78 1679.5700000000002 True False 935.5814541429794 1239.2687880160036 1204.0896289991404 1106.4564398961563 1311.3954898066622 1880.8438762605074 1322.0005767948815 1396.9462893422276 1327.7851058309466 1255.418771624873 1262.4864152261764 0.7410625911371637 0.9816096023448986 0.953744622102271 0.8764105708796344 1.038740277907643 1.4897933582307508 1.0471404371967385 1.1065040165932893 1.0517222916755677 0.9944018062166339 1.0 10.302052148731454 -4.6010893935042665 0.7702335721528808 1.0595448505672556 0.15662683045548026 0.31373271026511285 0.14462987818706358 6.3678956451165245 1.316472007862273 0.02334632089750881 6.298889544971338 2.5055934582375804e-05 4.6010893935042665 -0.9029180201117752 VLS(ph)PLR ddPTM_A549_PD325901_60min_R1 4 VLSPLR 6 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(1)PLR;VLS(1)PLR;VLS(1)PLR;VLS(1)PLR 95.352 0.035469 1689686100.0 10661.699999999999 10070.94 10082.83 9683.109999999999 12360.04 10098.310000000001 9849.99 10201.539999999999 9672.17 9274.36 9873.579999999998 True False 11744.067935271292 10919.653457766999 10767.111476782295 10281.213712761613 11491.91343022317 10016.07271144401 10224.836759571346 9998.062281746686 9265.682330777208 8688.775326827821 8659.192253780491 1.3562544393380322 1.2610475824693255 1.2434313918924151 1.187317871164365 1.3271345748451249 1.1566982713741139 1.1808072231110605 1.1546183510802248 1.0700400290491219 1.0034163778999612 1.0 13.080016738503732 -8.181890219588078 0.3886809742277486 0.9941553308013761 1.3105014889914781 0.8397819424533647 0.04516987070151168 0.28316288367472964 0.10554389831602498 0.020431041724468434 0.031249569060273402 6.578241002878758e-09 8.181890219588078 0.31634615819010203 VLS(ph)PPGR ddPTM_A549_PD325901_60min_R1 1 VLSPPGR 7 0 Q86VQ6;H0YBI6;H0YBQ0 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 VLS(1)PPGR 52.937 0.046113999999999995 4002100.0 1665.6 2042.7 1648.4 2055.4 1993.3 1901.5 1618.1 2147.1 1891.3 2038.7 1901.7 True False 1834.6904858500866 2214.8454978562745 1760.2703366344492 2182.3573898479117 1853.2974845116892 1886.0148144403165 1679.6776809582957 2104.274406132634 1811.8152381729149 1909.9761340732819 1667.802955869539 1.1000642968003003 1.3280019021800602 1.0554426291424222 1.3085223180397234 1.1112208897276115 1.1308379133175293 1.007119980838843 1.2617044469953782 1.0863484992615884 1.145204910059343 1.0 10.703733134966166 -9.585255908378109 0.21239095994885726 0.9303759839702606 1.2250708884517636 0.03106458300720283 0.10633800191949734 2.9799176039645654 0.36573670993342855 0.2915169930125926 0.14016773746765593 2.5986278683399044e-10 9.585255908378109 0.29469490448150304 VLS(ph)PPGRR ddPTM_A549_MK2206_60min_R1 2 VLSPPGRR 8 1 Q86VQ6;H0YBI6;H0YBQ0 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 VLS(1)PPGRR;VLS(1)PPGRR 64.654 0.0038978999999999997 10955800.0 1454.31 1582.88 1540.73 1402.0500000000002 1777.46 1524.94 1607.23 1389.4099999999999 1914.0700000000002 2016.1599999999999 2299.62 True False 1699.7619735342237 1663.4418309728821 1759.2286817833794 1745.5523129404166 1515.997988587025 1686.308138626753 1899.2428866779037 1586.3631223896687 1480.5362011417062 1560.7080557160668 1728.5608877167485 0.9833393695373003 0.9623275886857061 1.0177418072366198 1.0098298100717251 0.8770289778970428 0.9755561117978279 1.0987422544233363 0.9177363283309571 0.8565137691489378 0.9028944637163473 1.0 10.755355707388741 VLS(ph)PPGRR ddPTM_A549_PD325901_60min_R1 2 VLSPPGRR 8 1 Q86VQ6;H0YBI6;H0YBQ0 Q86VQ6 TXNRD3 Thioredoxin reductase 3 1 VLS(1)PPGRR;VLS(1)PPGRR 63.216 0.0041808999999999995 20846700.0 2672.5 2745.2 2600.2 2680.1 3381.0 3140.0 2894.3 3138.2 3536.0 3212.2 3255.6 True False 2943.810232609484 2976.547638280237 2776.6652082728087 2845.6436900512745 3143.530223816797 3114.4288810636826 3004.44417032173 3075.6061391297258 3387.394216771232 3009.381143802519 2855.181838948767 1.031041243136146 1.042507204856751 0.9725003046724103 0.9966593550129177 1.1009912506918282 1.09079878506455 1.0522776971108498 1.0772014927995324 1.186402270623302 1.0540068246268075 1.0 11.479366914591935 -6.761379778230006 24.999996565800384 1.0872947428849957 1.0102236945680676 0.3406866867058176 0.04588656458564546 1.8826178200567567 788771.4401853951 0.009733192303908815 0.01929078127952176 1.7322884979676708e-07 6.761379778230006 -0.07707104831692813 VLS(ph)PPHIK ddPTM_A549_MK2206_60min_R1 4 VLSPPHIK 8 0 A0A0D9SG79;Q9NZ09-2;Q9NZ09;Q9NZ09-3;Q9NZ09-4 A0A0D9SG79 UBAP1 Ubiquitin-associated protein 1 1 VLS(1)PPHIK;VLS(1)PPHIK;VLS(1)PPHIK;VLS(1)PPHIK 81.33800000000001 0.00115 59439800.0 7277.800000000001 7684.24 6600.82 5785.280000000001 7309.33 6214.120000000001 5751.710000000001 6052.08 7291.9 8069.900000000001 7197.21 True False 8506.1147148733 8075.334993957255 7536.915531786466 7202.673859711089 6234.137239610902 6871.6940538009885 6796.721255659839 6909.9808737176745 5640.296292771529 6246.903985211038 5409.944124109142 1.5723110109337786 1.4926836227327995 1.3931595888760817 1.3313767562982284 1.1523478055584317 1.2701968626954265 1.2563385313668205 1.277273981985081 1.042579398858453 1.1547076720020133 1.0 12.40139797810661 -2.0000000000000004 0.15646255799865638 0.917954453057212 3.4635532231884514 0.7554398313109334 0.08326539174294872 14.28023312493606 0.1374949249651279 0.11425069725628623 8.409486025217449 0.00999999999999999 2.0000000000000004 2.5455987701312393 VLS(ph)PPHIK ddPTM_A549_PD325901_60min_R1 2 VLSPPHIK 8 0 A0A0D9SG79;Q9NZ09-2;Q9NZ09;Q9NZ09-3;Q9NZ09-4 A0A0D9SG79 UBAP1 Ubiquitin-associated protein 1 1 VLS(1)PPHIK;VLS(1)PPHIK 79.148 0.0012753 50632000.0 6249.0 7180.9 7561.799999999999 6433.4 8858.7 7174.700000000001 6997.6 8600.7 9913.0 12506.5 13675.3 True False 6883.393879729339 7786.059644370743 8074.9892207973635 6830.7765066885095 8236.495472855913 7116.271621964202 7263.897497233649 8429.152291381371 9496.391083386092 11716.837455627352 11993.324794869173 0.5739354180313787 0.6491994319791683 0.6732902976372239 0.5695481964776575 0.6867566428601636 0.5933526977447148 0.605661701110704 0.7028203134286349 0.7918063794494011 0.9769465645289532 1.0 13.549944038313384 -9.414261165503682 0.5718183216797009 0.9881041260955825 0.6134577480615679 0.9132048563797931 0.04263814977862019 0.14178128491842446 0.10434383445081578 0.02101544297614025 0.012495072024125356 3.8524661770738536e-10 9.414261165503682 -0.37464637803401457 VLS(ph)PPK ddPTM_A549_MK2206_60min_R1 2 VLSPPK 6 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7ESQ0;K7EL01;Q5XUX1;Q5XUX1-2 Q9H6Z4-2 RANBP3;FBXW9 Ran-binding protein 3;F-box/WD repeat-containing protein 9 1 VLS(1)PPK;VLS(1)PPK 87.75399999999999 0.038713 61571000.0 8875.0 9497.7 10021.0 7990.200000000001 13590.6 9790.8 9826.4 11016.7 14593.9 12367.7 13202.9 True False 10372.883027082422 9981.092362043326 11442.128484647692 9947.799358693714 11591.44074335896 10826.855957392949 11611.729685018177 12578.35096222877 11288.404951669454 9573.827980259304 9924.255548497344 1.0452051518013366 1.0057270606614506 1.1529457729834631 1.0023723502565323 1.1679909577816192 1.0909489285604168 1.1700353369856884 1.2674352147384282 1.1374560939614922 0.9646897879114874 1.0 13.276743169610596 -5.740286503717128 24.75381245745166 1.0954696423876467 1.0254660723543432 0.10593108236822468 0.0858871086205618 435.0544846690542 509106.27860935 0.012203979220768199 0.04716489901889934 1.8185007993134844e-06 5.740286503717128 -0.07000357003330349 VLS(ph)PPK ddPTM_A549_PD325901_60min_R1 2 VLSPPK 6 0 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7ESQ0;K7EL01;Q5XUX1;Q5XUX1-2 Q9H6Z4-2 RANBP3;FBXW9 Ran-binding protein 3;F-box/WD repeat-containing protein 9 1 VLS(1)PPK;VLS(1)PPK 77.282 0.04471 78796000.0 11130.1 10415.3 10532.3 9733.599999999999 11608.099999999999 10901.2 10432.5 10628.5 11588.5 12208.7 11240.4 True False 12260.019558453438 11293.033883498536 11247.08521386497 10334.822365390502 10792.787101770997 10812.424241481342 10829.514496383044 10416.506229603048 11101.475645094295 11437.840598450219 9857.902058766347 1.2436743117721438 1.145581870886612 1.1409207706484832 1.04837949330203 1.0948361058399119 1.0968281260074162 1.0985617864556354 1.0566656239336392 1.1261499230682732 1.1602712758014144 1.0 13.267064932131566 -2.0000000000019047 0.014116126143798447 7.655250479355723e-11 2.4382571453472255 0.11983986632372035 0.05807738066299551 2977.9809894484933 3.1578777945318484 219.7576564486055 337.63937717916474 0.009999999999956143 2.0000000000019047 2.438257145270673 VLS(ph)PPKLNEVSSDANR ddPTM_A549_MK2206_60min_R1 4 VLSPPKLNEVSSDANR 16 1 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7ESQ0 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 VLS(1)PPKLNEVSSDANR;VLS(0.997)PPKLNEVS(0.001)S(0.001)DANR;VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR 220.48 7.1722e-48 444747900.0 43218.78 48313.799999999996 49114.299999999996 45895.5 62729.0 49373.6 46076.8 47428.1 69370.9 69276.0 66979.0 True False 50513.053466277124 50772.766055075335 56079.44626619419 57139.89956032726 53501.647196603815 54598.28158045682 54448.35813224022 54151.17841746461 53658.501912563865 53626.50348572842 50346.265773640895 1.00331281158738 1.0084713389340931 1.1138749896234594 1.134938186224791 1.0626735940486562 1.0844554356013847 1.0814775891630675 1.075574873038862 1.0657891124202723 1.0651535453857814 1.0 15.61959715580262 -10.382155034135021 0.7133554854129767 0.9988867615516992 1.0726736482212686 0.027851660092060526 0.04123565332046868 0.6888562166118994 0.6281786661747008 0.027867327520242405 0.007987334151220282 4.1480593907211056e-11 10.382155034135021 0.07378688666956945 VLS(ph)PPKLNEVSSDANR ddPTM_A549_PD325901_60min_R1 6 VLSPPKLNEVSSDANR 16 1 Q9H6Z4-2;Q9H6Z4;B7Z7F3;Q9H6Z4-3;K7ESQ0 Q9H6Z4-2 RANBP3 Ran-binding protein 3 1 VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR;VLS(0.995)PPKLNEVS(0.004)S(0.002)DANR;VLS(1)PPKLNEVSSDANR;VLS(0.919)PPKLNEVS(0.037)S(0.044)DANR 229.35 1.1732999999999999e-55 754582000.0 86088.9 87268.5 88572.84 88301.2 106988.7 93045.5 94050.40000000001 96763.40000000001 100378.3 102813.2 104639.1 True False 94828.58175270121 94622.92276382732 94583.92555415494 93755.36457742463 99474.18280297772 92287.76829713724 97629.53943835376 94833.37807758125 96159.74912594112 96321.55700578952 91769.15406190683 1.033338301110747 1.0310972540947185 1.030672305101007 1.0216435526274756 1.083960986889703 1.0056512914446238 1.0638600784365253 1.0333905662201845 1.04784390908815 1.0496071146173112 1.0 16.485721688307432 -10.803898304317087 0.9634666864684933 0.9991299382670298 1.0394441114929724 0.0 0.02455164472019545 0.486237448254403 0.7727092756326416 0.013933183954577382 0.0031861375123488946 1.570730568198238e-11 10.803898304317087 0.04031417322594266 VLS(ph)PTAAK ddPTM_A549_MK2206_60min_R1 2 VLSPTAAK 8 0 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.777)PT(0.223)AAK;VLS(0.775)PT(0.225)AAK 101.46 0.002294 54529000.0 4804.9 6061.0 5965.3 5492.9 6568.5 5555.7 5215.0 6059.9 7434.6 6080.1 5754.5 True False 5615.84965147362 6369.479011375868 6811.2692395438435 6838.660746585655 5602.282351239335 6143.600486424807 6162.497995946607 6918.909382665417 5750.674970616609 4706.601187187157 4325.498833879522 1.2983126032741956 1.472542071098678 1.5746783206122945 1.5810108866569936 1.2951760170085798 1.420321845495595 1.4246907079661582 1.5995633448038353 1.3294824924178406 1.088105989145725 1.0 12.078650804386081 -9.981479469613804 0.6388979533825941 1.0028745775584393 1.4637401572434783 0.6802630101511944 0.10563290794974181 0.28644615294145587 0.23356765993462145 0.06280951020986449 0.02447271396275294 1.0435674640868427e-10 9.981479469613804 0.46086557968503894 VLS(ph)PTAAK ddPTM_A549_PD325901_60min_R1 1 VLSPTAAK 8 0 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.734)PT(0.266)AAK 59.645 0.01209 41832000.0 5220.8 6136.1 5907.8 6009.1 6142.0 5702.8 5765.3 6329.1 6224.4 6060.0 5891.4 True False 5750.811772650171 6653.210681644823 6308.738834487384 6380.268459343727 5710.6071087497085 5656.358287557311 5984.701646393212 6202.861135417103 5962.810113934066 5677.37056579393 5166.795148661616 1.1130326647728306 1.287686174933458 1.2210158624387446 1.2348599616914258 1.1052513104238242 1.0947517996765384 1.1583005468957799 1.2005239141373478 1.154063581459901 1.0988185911075983 1.0 12.335053970075988 -14.999999999987436 0.16631905769302374 0.2836497505770849 1.2233352535054856 0.32846390662617153 0.06316300486149502 27.81108235289702 0.2943046869102911 6.456098495203478 0.0804286169428881 1.0000000000289302e-15 14.999999999987436 0.9396855029284006 VLS(ph)PTAAKPSPFEGK ddPTM_A549_MK2206_60min_R1 3 VLSPTAAKPSPFEGK 15 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.871)PT(0.129)AAKPSPFEGK;VLS(0.995)PT(0.005)AAKPSPFEGK;VLS(0.977)PT(0.023)AAKPSPFEGK 168.09 1.1502999999999998e-27 311098900.0 37055.5 34460.82 35592.5 31494.6 40529.9 32940.06 31722.38 30485.97 43242.630000000005 42896.509999999995 48214.9 True False 43309.56248000593 36214.72854393693 40640.05170041143 39210.77841384632 34568.00539963388 36425.755285357816 37485.9258248623 34807.449606867536 33448.24334929046 33206.15859807992 36241.809666455425 1.1950165534943542 0.9992527657209248 1.1213582344379154 1.081921095406527 0.9538156542891737 1.0050755086623793 1.0343282018711775 0.9604225044833923 0.9229186858251556 0.9162389765766793 1.0 15.145367374989812 -6.049800566322196 0.53816405119896 0.964334284974278 1.1738198297791815 0.5728901192060885 0.05361680413646761 1.187496227160026 0.37410717516767167 0.010570736312896274 0.13261252520297576 8.916603061492443e-07 6.049800566322196 0.20948554480490356 VLS(ph)PTAAKPSPFEGK ddPTM_A549_PD325901_60min_R1 3 VLSPTAAKPSPFEGK 15 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.837)PT(0.163)AAKPSPFEGK;VLS(0.852)PT(0.148)AAKPSPFEGK;VLS(0.984)PT(0.016)AAKPSPFEGK 144.72 3.9256e-14 572887600.0 41024.46 37940.57 41214.8 38633.8 49613.6 42572.8 45848.8 44980.4 46023.1 48680.6 50098.1 True False 45189.23297858878 41137.954986341974 44011.884172725986 41020.122082274145 46128.911893628225 42226.101231766865 47593.601173426025 44083.230635558815 44088.909156641435 45606.89860811683 43936.351298021604 1.0285158335536067 0.9363079493629769 1.0017191430893304 0.9336260492828231 1.0499031105413013 0.9610743720011236 1.0832397267264453 1.0033430026207895 1.0034722468778763 1.0380219854571868 1.0 15.423127445423127 VLS(ph)STSEEDEPGVVK ddPTM_A549_MK2206_60min_R1 2 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLS(0.979)S(0.019)T(0.002)SEEDEPGVVK;VLS(0.848)S(0.137)T(0.015)SEEDEPGVVK 180.48 1.3111999999999999e-28 4729100.0 3217.4 2765.8 3852.0 2848.1 4188.1 3099.1 2606.5 3136.1000000000004 4360.0 4377.2 4682.9 True False 3760.4184621222544 2906.5674063130487 4398.271522089901 3545.884627856068 3572.0360379425206 3427.0447049839136 3080.067310917514 3580.6517789034524 3372.466961489307 3388.3874799025734 3520.006688534961 1.06829866953672 0.8257278077851529 1.2495065808867758 1.007351673337836 1.0147810370863852 0.9735903957643505 0.8750174597535918 1.017228686117563 0.9580853844607151 0.9626082504158059 1.0 11.78136245486189 -7.031794454192942 2.8162134738257194 0.9738594704852289 1.0367357546785938 0.10914875358022702 0.09739321275406966 0.5429219004203674 8.630482607651258 0.013557766069146028 0.02598122597971867 9.294061582868026e-08 7.031794454192942 0.06287628419336488 VLS(ph)STSEEDEPGVVK ddPTM_A549_PD325901_60min_R1 1 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLS(0.746)S(0.249)T(0.005)SEEDEPGVVK 192.39 2.6480999999999996e-71 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VLSAPPHFHFGQT(ph)NRTPEFLR ddPTM_A549_MK2206_60min_R1 2 VLSAPPHFHFGQTNRTPEFLR 21 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 VLSAPPHFHFGQT(0.577)NRT(0.423)PEFLR;VLSAPPHFHFGQT(0.5)NRT(0.5)PEFLR 122.39 3.3771e-15 17563600.0 1108.94 1420.08 1443.06 1528.5800000000002 1756.3899999999999 1441.25 1268.78 1489.52 1909.41 2061.73 1976.4899999999998 True False 1296.1019610200328 1492.3560063479047 1647.7076071305964 1903.082168620565 1498.0273576757638 1593.7621183756792 1499.3009026456648 1700.6640214636873 1476.9316837012143 1595.9837610663278 1485.6729846510634 0.8724005715998432 1.0044983127282285 1.1090647970001215 1.2809562994561265 1.0083156745477215 1.0727543240277755 1.0091728921070757 1.144709528297116 0.9941162684923546 1.0742497020238764 1.0 10.536900880120605 VLSAPPHFHFGQT(ph)NRTPEFLR ddPTM_A549_PD325901_60min_R1 3 VLSAPPHFHFGQTNRTPEFLR 21 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 VLSAPPHFHFGQT(0.559)NRT(0.441)PEFLR;VLS(0.002)APPHFHFGQT(0.499)NRT(0.499)PEFLR;VLSAPPHFHFGQT(0.5)NRT(0.5)PEFLR 88.22200000000001 1.8466999999999998e-06 37809000.0 2250.49 2052.93 2330.4300000000003 2517.34 2628.8900000000003 2503.99 1895.8 1987.6299999999999 2629.72 2344.71 2101.7200000000003 True False 2478.958088076826 2225.9376158584623 2488.586993814015 2672.830374506053 2444.2458355781555 2483.59833563524 1967.9457064215662 1947.985160384429 2519.2020134976374 2196.6646104492884 1843.2217639007874 1.3449049575188594 1.2076341867555525 1.3501289115355546 1.4500861626381707 1.3260725776183482 1.3474224232135972 1.0676662705288522 1.0568371090963748 1.3667384266157325 1.191752752420042 1.0 10.848013941324028 -7.74387549350801 24.65778472141137 1.1598099768485097 1.3369395730232292 0.47599560848077493 0.1037743519834535 222.5307541449104 312408.06481084315 0.02217620822319709 0.03284982749894283 1.8035347163338843e-08 7.74387549350801 0.17712959617471946 VLSAPPHFHFGQTNRT(ph)PEFLR ddPTM_A549_MK2206_60min_R1 2 VLSAPPHFHFGQTNRTPEFLR 21 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 VLS(0.001)APPHFHFGQT(0.334)NRT(0.665)PEFLR;VLSAPPHFHFGQT(0.156)NRT(0.844)PEFLR 118.22 6.347600000000001e-15 14553700.0 726.36 786.64 1039.8899999999999 893.0899999999999 1095.6799999999998 1232.35 1019.0699999999999 810.37 1867.9099999999999 1586.96 1440.54 True False 848.9518102029961 826.6766159888988 1187.3620387087412 1111.8970900923337 934.5069234385187 1362.756459032275 1204.221827944259 925.2424291540408 1444.8313674393332 1228.4646338084126 1082.81416111857 0.7840235570303319 0.7634519806565185 1.0965520043459454 1.0268586522212828 0.8630353730072696 1.2585321728933787 1.11212234858498 0.8544794318151933 1.3343299518236738 1.1345110526993687 1.0 10.080569945116611 -5.124596972337154 0.515863088342822 1.1378890819823415 0.418350642525287 0.34591502964195786 0.1457266877159721 3.751820541247725 0.5990752568813842 0.03181120547510653 1.675025455345847 7.505904382767104e-06 5.124596972337154 -0.7195384394570545 VLSAPPHFHFGQTNRT(ph)PEFLR ddPTM_A549_PD325901_60min_R1 1 VLSAPPHFHFGQTNRTPEFLR 21 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 VLSAPPHFHFGQT(0.189)NRT(0.811)PEFLR 103.02 6.0814e-10 14666000.0 1050.3 1071.8 1213.5 1129.1 1406.5 1807.9 1229.8 1364.7 1577.9 1577.7 1034.6 True False 1156.9256828100054 1162.1243474824266 1295.8554073682992 1198.8419426278476 1307.7122921615864 1793.1770618073342 1276.600711972382 1337.47998791356 1511.586350295059 1478.0837527480328 907.3507588697609 1.2750589245675255 1.2807884229137845 1.4281747104972702 1.3212552377442017 1.441242297290339 1.976277690053404 1.4069539254726324 1.4740495611417006 1.6659338580131489 1.6290103229639705 1.0 9.825516557792668 -10.91376959112768 1.1485534684814847 0.9980502775788608 1.4902277351150188 0.0 0.2639780096732938 0.36603513896664164 0.8521251294520137 0.14369406259744325 0.03351471240472362 1.2196364884169363e-11 10.91376959112768 0.49217745753615805 VLSEPIGPES(ph)PSSTECPR ddPTM_A549_PD325901_60min_R1 1 VLSEPIGPESPSSTECPR 18 0 Q56NI9;Q56NI9-2 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 VLSEPIGPES(0.899)PS(0.072)S(0.01)T(0.018)ECPR 169.61 3.1391000000000002e-30 10284000.0 1870.2 2058.4 1779.6 2029.0 2094.6 2217.1 1618.6 1937.6 1784.6 2134.1 2275.3 True False 2060.0613272315277 2231.868591955427 1900.3743576041422 2154.3267218066626 1947.4825219777172 2199.0446726771625 1680.1967087319051 1898.9530479822042 1709.5994681136715 1999.352561792216 1995.452524315066 1.032378020588908 1.1184774204144545 0.9523525789000873 1.0796181294997884 0.975960338944263 1.1020280592403364 0.8420128708943493 0.9516403045640061 0.8567477538462044 1.0019544626743193 1.0 10.962500239407037 -7.754243188581087 24.997413008225838 0.9262286217906838 1.0413114560949612 0.424165099475202 0.06544605223317837 130.58435848403835 453609.148124472 0.010538114263860962 0.0154499270754288 1.7609896822623145e-08 7.754243188581087 0.11508283430427746 VLSEPIGPESPS(ph)STECPR ddPTM_A549_PD325901_60min_R1 1 VLSEPIGPESPSSTECPR 18 0 Q56NI9;Q56NI9-2 Q56NI9 ESCO2 N-acetyltransferase ESCO2 1 VLSEPIGPES(0.271)PS(0.666)S(0.053)T(0.011)ECPR 227.67 3.668e-64 11731000.0 2543.0 2405.0 2282.8 2872.0 2145.7 2496.5 2838.8 2887.1 2509.5 2715.3 2885.8 True False 2801.1634879423464 2607.677790348233 2437.724535591555 3049.396917214753 1994.9934342631473 2476.1693317119375 2946.832087450967 2829.5145256138658 2404.0344420213264 2543.8554946040044 2530.8648945934233 1.106800878200314 1.0303504528901966 0.9631982097500187 1.2048833281180071 0.7882654813083722 0.9783885884235347 1.164357723616996 1.1180029924388437 0.9498865179081509 1.0051328698099737 1.0 11.30541477863673 -2.0000000000000004 0.23202107843950884 0.9844973456558431 1.4818065194101089 0.0037408999415604605 0.11087694966918375 120.20646363332001 1.4248598896786058 0.06144650180509033 23.113046723676074 0.00999999999999999 2.0000000000000004 0.49730917375426575 VLSKPPEGVVSEVEMLS(ph)SQER ddPTM_A549_MK2206_60min_R1 1 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 VLSKPPEGVVS(0.002)EVEMLS(0.499)S(0.499)QER 40.756 0.020094 2292200.0 698.24 800.48 840.07 410.59 1028.2 879.0 792.48 651.18 1485.8 1151.2 882.31 True False 816.0858416709901 841.2210128734791 959.2045580379189 511.18456843208554 876.9531420483036 972.0151965670229 936.4633579727263 743.486759155112 1149.2686723350482 891.1431204568772 663.208076482795 1.2305125202922058 1.2684118947024043 1.4463101280745676 0.770775547763322 1.3222895998177029 1.465626295931031 1.4120204369933063 1.1210459967527244 1.7328930588873228 1.343685567254993 1.0 9.373317765713828 -6.9722806810614095 24.995536495288523 1.3501828619678042 1.184738689689449 0.10409961025943737 0.23113822521307753 521.2895498218222 470063.73394670046 0.04294626617313859 0.08115971617931764 1.0659070113672229e-07 6.9722806810614095 -0.16544417227835528 VLSKPPEGVVSEVEMLS(ph)SQER ddPTM_A549_PD325901_60min_R1 3 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 VLSKPPEGVVS(0.001)EVEMLS(0.499)S(0.499)QER;VLSKPPEGVVSEVEMLS(0.5)S(0.5)QER;VLSKPPEGVVSEVEMLS(0.5)S(0.5)QER 139.73 4.1764999999999995e-19 10359900.0 6745.9 7360.299999999999 8367.1 7807.4 8600.6 8257.5 7919.9 9853.300000000001 8317.599999999999 8511.6 8804.6 True False 7430.738801930893 7980.578311975099 8934.941721459663 8289.645366108098 7996.523526459252 8190.253657765397 8221.296128435577 9656.76820173568 7968.040197233147 7974.176123401255 7721.690016957949 0.9623202674041452 1.033527413616526 1.1571225601956614 1.0735532439016375 1.0355924038517124 1.0606814880911322 1.0647016534437954 1.250602935436157 1.0319036609517058 1.0326982960839932 1.0 12.91470092389732 -8.982063024072948 24.981158049697164 1.0140750494888762 1.081937209099082 0.12158196202612581 0.070236366865135 151.09665787367163 210438.31126524304 0.012431673454341739 0.012603112794378668 1.0421661810441227e-09 8.982063024072948 0.06786215961020581 VLSLETYPVS(ph)SPK ddPTM_A549_MK2206_60min_R1 1 VLSLETYPVSSPK 13 0 A0A2R8YDN7;Q9H7F0;C9J7Z7 A0A2R8YDN7 ATP13A3 Probable cation-transporting ATPase 13A3 1 VLSLETYPVS(0.618)S(0.382)PK 128.85 4.954e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VLSLETYPVSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 VLSLETYPVSSPK 13 0 A0A2R8YDN7;Q9H7F0;C9J7Z7 A0A2R8YDN7 ATP13A3 Probable cation-transporting ATPase 13A3 1 VLSLETYPVS(0.147)S(0.853)PK 140.39 7.081599999999999e-10 2498800.0 1763.5 1559.0 1866.8 1260.0 2437.2 1229.3 2226.1 2032.7 2973.0 2380.8 2967.4 True False 2061.135686564492 1638.3464409726093 2131.5403108612218 1568.70005656355 2078.6911085393176 1359.3837100567023 2630.55355489487 2320.84144988267 2299.6202469054374 1842.975626462589 2230.512683926335 0.9240636475271277 0.734515635252365 0.9556279711931995 0.7032912513199401 0.9319342245928106 0.6094489934322191 1.17934929213868 1.040496862720068 1.0309828155101335 0.8262565103276747 1.0 11.123159636757252 -7.770278666084717 24.999942256079333 1.0285846708140445 0.8137279110627327 0.4005338713833365 0.12472319016116694 110.99463780014838 313923.24849948497 0.015113239415991261 0.021049513920074432 1.6971543199166815e-08 7.770278666084717 -0.2148567597513118 VLSNRGDS(ph)LSR ddPTM_A549_MK2206_60min_R1 2 VLSNRGDSLSR 11 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 VLSNRGDS(0.734)LS(0.266)R;VLSNRGDS(0.899)LS(0.101)R 106.14 4.5316000000000005e-05 80783000.0 6844.4 8311.7 8746.9 7437.1 10815.6 6655.9 7159.6 6042.200000000001 12078.099999999999 13340.4 14712.5 True False 7999.567390485964 8734.730027858905 9987.341946149581 9259.189833864106 9224.63956733869 7360.222920171152 8460.406644636503 6898.700353461444 9342.42963476238 10326.794374689815 11058.980205656871 0.7233548882196243 0.789831418939599 0.9030979132271955 0.8372553039861542 0.8341311220197426 0.6655426434714353 0.7650259325275626 0.6238098111372541 0.8447822006213155 0.9337926447691325 1.0 13.432930734373913 -9.79862908975671 1.0183235553874723 0.9757204616359012 0.776525252840007 0.4606028376434712 0.07925238309569779 0.27872579285607335 0.5934012691853517 0.026885114511011787 0.01640785067997716 1.5899040302685557e-10 9.79862908975671 -0.19919520879589425 VLSNRGDS(ph)LSR ddPTM_A549_PD325901_60min_R1 4 VLSNRGDSLSR 11 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 VLS(0.001)NRGDS(0.994)LS(0.005)R;VLSNRGDS(0.998)LS(0.002)R;VLSNRGDS(0.965)LS(0.035)R;VLS(0.001)NRGDS(0.998)LSR 97.508 8.337799999999999e-05 159478000.0 14100.0 15143.2 14594.7 17292.4 16727.7 16337.6 15656.3 16766.6 16155.5 16744.0 18895.800000000003 True False 15531.42162012862 16419.370609065023 15585.184107060666 18360.512274110177 15552.804059432183 16204.552002314016 16252.109063956086 16432.177009856754 15476.5405172646 15686.780982451077 16571.736390345275 0.9372235506459815 0.9908056839855949 0.9404677783880646 1.1079413672550962 0.9385138462915253 0.9778427329893334 0.9807125023678627 0.9915784696786615 0.9339118214722063 0.9465985104367353 1.0 14.016437155946718 VLSPESLSCT(ph)EIPIPLNERHSPK ddPTM_A549_PD325901_60min_R1 1 VLSPESLSCTEIPIPLNERHSPK 23 1 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 VLSPESLS(0.094)CT(0.475)EIPIPLNERHS(0.43)PK 56.9 0.0021035999999999997 2986900.0 402.49 417.88 462.54 352.46 411.25 514.26 362.96 382.73 588.95 576.78 431.39 True False 443.3504885025226 453.09621414998736 493.9307458789725 374.23065370526155 382.3652187354797 510.07203706235964 376.7726414193331 375.09614990412337 564.1984796287944 540.3620123661094 378.33176480652065 1.1718563698431523 1.1976161039020907 1.3055492343646304 0.9891600138218465 1.0106611559064351 1.3482136170173582 0.9958789519352549 0.9914476784574195 1.4912796971127344 1.428275557677403 1.0 8.563508100195769 VLSPESLSCTEIPIPLNERHS(ph)PK ddPTM_A549_PD325901_60min_R1 1 VLSPESLSCTEIPIPLNERHSPK 23 1 Q9P266 Q9P266 KIAA1462 Junctional protein associated with coronary artery disease 1 VLSPESLS(0.002)CT(0.011)EIPIPLNERHS(0.987)PK 61.37 0.00038258 3584300.0 432.96 489.73 365.08 441.44 583.93 666.82 303.24 458.2 499.79 332.78 344.71 True False 476.91378047169405 531.0012658075844 389.85652420438305 468.70674621701966 542.9167712491396 661.3896390034662 314.7799641392951 449.06084154905386 478.7855643665425 311.7682140074098 302.31285529672834 1.5775504485364678 1.7564627388616743 1.2895797098066777 1.5504029617165012 1.7958772236670253 2.1877655131611724 1.0412390959369886 1.4854176184743726 1.5837419943541644 1.0312767338372058 1.0 8.239898517991124 -11.042507529860552 0.41490103858360255 0.7529871123334317 1.6229626963565167 0.3996413367233628 0.2727347246384246 2.172635800677779 0.3976778045282979 0.8390404157705105 0.07822875150056363 9.067602429073492e-12 11.042507529860552 0.869975584023085 VLSPLRS(ph)PPLIGSESAYESFLSADDK ddPTM_A549_MK2206_60min_R1 2 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.004)PLRS(0.982)PPLIGS(0.014)ESAYESFLSADDK;VLS(0.003)PLRS(0.997)PPLIGSESAYESFLSADDK 381.41 0.0 953290000.0 102627.0 117348.0 112178.0 105594.0 155937.0 132515.0 119547.0 130666.0 172560.0 155872.0 153718.0 True False 119947.92861074807 123320.51196616674 128086.52720794412 131464.53474029448 132998.873868495 146537.64934366208 141267.1424585674 149188.30564784212 133475.43552169594 120660.40694219424 115545.5781990257 1.0381005528756746 1.0672888905687834 1.1085368146872467 1.1377720964263003 1.1510511777387642 1.268223774788274 1.2226096806165672 1.2911641273789576 1.1551756250835172 1.0442667631500213 1.0 16.81810252496152 -4.1037985063836775 16.121151400264715 1.1160889582197129 1.1200180161299134 0.0 0.09318554859627952 0.0 0.0 0.014513057932444014 0.0 7.874110291877804e-05 4.1037985063836775 0.003929057910200484 VLSPLRS(ph)PPLIGSESAYESFLSADDK ddPTM_A549_PD325901_60min_R1 2 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLSPLRS(1)PPLIGSESAYESFLSADDK;VLSPLRS(1)PPLIGSESAYESFLSADDK 327.04 6.590499999999997e-211 739230000.0 76860.0 75738.0 77733.0 81944.0 95017.0 85774.0 85052.0 90053.0 92134.0 90462.0 91766.0 True False 84662.77061865837 82120.7070625342 83008.428826502 87005.4947716733 88343.33371085489 85075.48498227901 88288.70040224024 88256.82226978836 88261.92838461568 84750.2138816585 80479.3637526025 1.0519811125609275 1.020394586057828 1.0314250132701592 1.0810907382311377 1.0977141169061253 1.057109313684502 1.097035268241484 1.0966391650547107 1.0967026113170721 1.053067642808221 1.0 16.296331279193467 -3.4552149050850227 9.901536254981684 1.056209163929063 0.2807356673798357 0.0 0.03353125135476484 0.0 0.0 0.005710755163866494 0.0 0.00035057835179767225 3.4552149050850227 -0.7754734965492273 VLSPLRS(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A549_MK2206_60min_R1 1 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.004)PLRS(0.996)PPLIGSESAYESFLSADDKASGR 261.13 6.496599999999998e-140 54521000.0 6228.3 6856.9 8281.1 6906.7 9789.2 7372.6 7171.6 5832.9 12352.0 10136.0 11571.0 True False 7279.484772684783 7205.886921812109 9455.484501967469 8598.841810053545 8349.221647674822 8152.763638464204 8474.586889305983 6659.731437507077 9554.291722090804 7846.270560242271 8697.601356646097 0.8369531407785563 0.82849128470413 1.0871370294227443 0.988645197389153 0.9599453119675267 0.9373577040564677 0.9743590838214605 0.7656974796181223 1.0984973132609814 0.9021188990510242 1.0 13.086401870910663 -8.832340529506858 24.99999998383049 1.0465126580618485 0.930376444190881 0.057600114264252045 0.096658012385048 45.57160256160711 16067.871461696228 0.015543151536833322 0.016546945198160277 1.4711585173773702e-09 8.832340529506858 -0.11613621387096751 VLSPLRS(ph)PPLIGSESAYESFLSADDKASGR ddPTM_A549_PD325901_60min_R1 4 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLSPLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(0.079)PLRS(0.92)PPLIGS(0.001)ESAYESFLSADDKASGR;VLS(0.003)PLRS(0.997)PPLIGSESAYESFLSADDKASGR;VLS(0.005)PLRS(0.992)PPLIGS(0.001)ES(0.002)AYESFLSADDKASGR 369.26 0.0 1230401000.0 80970.5 77988.3 91561.3 99271.3 100288.9 127098.0 114387.7 123450.3 117148.9 128952.9 124296.6 True False 89190.56555266849 84560.64774096274 97775.20042082475 105403.06273951971 93244.9536419226 126062.95602720745 118740.78651885132 120987.98692161315 112225.53912927351 120810.79188676031 109008.90618106618 0.818195216127763 0.7757223763029568 0.8969468995351444 0.9669215702838345 0.8553883981464845 1.1564463899657347 1.0892760112794846 1.1098908443375208 1.029507982979523 1.1082653346332174 1.0 16.734086484469806 -6.365304530945275 1.0725031007951031 1.0332466595806353 0.7921381192694193 0.6584717230750943 0.07258516634854346 0.29891734357035815 0.6036840249902247 0.011093186035732006 0.05184449491256121 4.3121659808259827e-07 6.365304530945275 -0.24110854031121598 VLSPT(ph)AAKPSPFEGK ddPTM_A549_MK2206_60min_R1 1 VLSPTAAKPSPFEGK 15 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.396)PT(0.604)AAKPSPFEGK 95.65100000000001 7.3256e-05 3656900.0 963.16 1362.3 1345.7 964.45 1755.3 1272.8 1044.3 1217.7 1681.7 1439.4 1840.4 True False 1125.717860998841 1431.6352511462374 1536.5404951392477 1200.7402932958062 1497.0976952318492 1407.4868511837387 1234.0357923618487 1390.3127040498484 1300.7976351230664 1114.2385402932844 1383.3778875439875 0.8137457386986362 1.0348837176282504 1.1107163913594 0.8679770756113275 1.0822044422654151 1.017427605180645 0.8920453358935231 1.0050129589089882 0.9403053546218438 0.8054477018361729 1.0 10.433979585776628 -5.629034584625265 0.0017225963150844523 1.2368452408192996 0.7129793717940488 0.0 0.10091369949723811 5748647.446364242 1673.2361349560056 251521.53294161955 257357.53637689058 2.349445717538193e-06 5.629034584625265 -0.5238658690252508 VLSPT(ph)AAKPSPFEGK ddPTM_A549_PD325901_60min_R1 1 VLSPTAAKPSPFEGK 15 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.449)PT(0.551)AAKPSPFEGK 113.4 5.0325e-06 8108400.0 1853.5 1678.5 1773.3 1862.8 2424.8 2655.2 1972.8 2002.5 2300.5 2411.1 2188.8 True False 2041.6659555254164 1819.9530856962613 1893.6468017191646 1977.860925274248 2254.490413105876 2633.5769315287534 2047.875983557581 1962.55856656914 2203.8179852042467 2258.8627345191003 1919.5914759463876 1.0635939891944166 0.948093960877273 0.9864842730589685 1.0303551302753795 1.1744636509152961 1.3719465649483362 1.066829067131561 1.0223834556264473 1.1480661447080718 1.1767413862918135 1.0 10.90658359647481 -6.535578404952469 23.28173239753697 1.0970006965284842 0.9966208144421187 0.222489681710624 0.10153020311018099 148.15047218149454 271596.9300427389 0.01594525587340536 0.03321561132606423 2.9135440933008374e-07 6.535578404952469 -0.1003798820863655 VLSQSTPGT(ph)PSK ddPTM_A549_MK2206_60min_R1 2 VLSQSTPGTPSK 12 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 VLSQST(0.001)PGT(0.975)PS(0.024)K;VLSQS(0.001)T(0.008)PGT(0.984)PS(0.007)K 173.59 8.660099999999999e-16 29134000.0 7621.8 7962.299999999999 7836.200000000001 8159.6 10153.3 8410.900000000001 8226.4 7601.700000000001 12307.0 11611.8 11616.9 True False 8908.173504880766 8367.547060266968 8947.490992056313 10158.702366298368 8659.763019995184 9300.935855296444 9721.030395753625 8679.26425422989 9519.484150240569 8988.68631525465 8732.103119870539 1.020163571432129 0.9582510588114797 1.024666208040494 1.1633740722989745 0.9917156154843454 1.065142695593171 1.1132519007514594 0.9939488958255189 1.09017083508534 1.0293838943335698 1.0 13.092113452284355 -5.994994131627484 24.446527200853897 1.0509909287946022 0.9897701097219134 0.19380235671852264 0.05221741721868511 138.56051724128048 676643.8447523176 0.007288703939037326 0.022541202218794108 1.0115931232458553e-06 5.994994131627484 -0.06122081907268884 VLSQSTPGT(ph)PSK ddPTM_A549_PD325901_60min_R1 2 VLSQSTPGTPSK 12 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 VLSQST(0.004)PGT(0.851)PS(0.145)K;VLSQST(0.012)PGT(0.937)PS(0.051)K 156.6 9.1763e-14 23545000.0 7500.9 6780.099999999999 6686.1 7064.200000000001 9412.2 7827.2 7503.099999999999 7793.6 8722.2 7854.1 8005.6 True False 8262.385846129273 7351.482821763016 7139.85895278549 7500.539590037766 8751.119542327258 7763.457878299885 7788.6345763538575 7638.150534039073 8355.636266267544 7358.190785610909 7020.961951679646 1.1768167813746147 1.047076294154293 1.0169345741971156 1.068306542843946 1.2464274272606908 1.1057541590070303 1.109340091850314 1.0879065556268648 1.1900984970113107 1.048031713638697 1.0 12.777452994371561 -5.23455533302889 22.009281739114577 1.095338741379405 1.1768173443247365 0.10873303070713258 0.06921745014035861 3526.794231311989 2887059.950309898 0.011278716394653037 0.9759559848813059 5.8269952889803925e-06 5.23455533302889 0.0814786029453316 VLSRNS(ph)ADDEELTNDSLTLSQSK ddPTM_A549_PD325901_60min_R1 1 VLSRNSADDEELTNDSLTLSQSK 23 1 A0A0U1RRH6;O94880 A0A0U1RRH6 PHF14 PHD finger protein 14 1 VLS(0.053)RNS(0.947)ADDEELTNDSLTLSQSK 195.01 4.576499999999999e-61 18417000.0 7298.8 6597.1 7429.9 6322.9 8146.4 8700.5 7412.7 7996.6 7623.8 8398.5 8012.1 True False 8039.768802907431 7153.060769524461 7934.137693618238 6713.451172652214 7574.22496755432 8629.646012641579 7694.794354885083 7837.101539788661 7303.398198478654 7868.217276703019 7026.662492886534 1.1441803005404796 1.0179883802254466 1.1291474012947669 0.9554253074555096 1.0779263946748705 1.2281287199118829 1.0950852360811316 1.1153376937803086 1.0393836627093267 1.1197659322143956 1.0 12.778623888854604 -9.011651565117175 2.4328701157910047 1.0148040249400294 1.093003647916163 0.0 0.0733586786057669 0.3108256195177167 3.7151156821723483 0.012676505161093997 0.012676657600757934 9.73527972971355e-10 9.011651565117175 0.07819962297613348 VLSS(ph)TSEEDEPGVVK ddPTM_A549_PD325901_60min_R1 1 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLS(0.358)S(0.483)T(0.126)S(0.033)EEDEPGVVK 180.85 1.1324e-29 5159800.0 3903.0 3914.2 3947.1 3974.1 5072.8 5098.7 4571.4 4698.9 4946.5 4501.1 4586.8 True False 4299.229686763262 4244.063370886095 4214.973941840473 4219.571131164047 4716.50402820995 5057.177877668599 4745.367128566063 4605.176753284263 4738.6158069171115 4216.899777837468 4022.652678120837 1.0687548816100192 1.0550409668648522 1.0478095622735886 1.0489523875909663 1.1724860199497118 1.257174874971069 1.1796611609985772 1.1448109299447522 1.1779828352296955 1.0482883100430564 1.0 11.973931463544343 -6.721320052718169 24.977367477282364 1.1163026560426792 1.0546087736448533 0.223433004387101 0.06746299285792566 303.5663163053023 188992.17218723192 0.012869255708331504 0.026789153065120745 1.8996777990171445e-07 6.721320052718169 -0.06169388239782592 VLSSAASLPGSELPSSRPEGSQGGELS(ph)R ddPTM_A549_MK2206_60min_R1 2 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLSSAASLPGSELPSSRPEGS(0.318)QGGELS(0.681)R;VLSSAASLPGSELPS(0.001)S(0.001)RPEGS(0.462)QGGELS(0.537)R 120.8 4.2326e-21 11808300.0 2005.95 2252.2 2050.29 2585.1 3176.8 1920.94 2420.0 2278.2 3593.5 3770.1 3581.1 True False 2344.505319231097 2366.8273600760176 2341.051951979676 3218.4496160495496 2709.496928281512 2124.2125957832272 2859.6826750126156 2601.1418266948895 2779.5779876403267 2918.431791551832 2691.8140366679936 0.8709759616727442 0.8792685259215551 0.8696930471755391 1.195643373653494 1.0065691356730595 0.7891379444668621 1.0623626432056261 0.9663155742789198 1.032604017133728 1.084187745437405 1.0 11.394363029809433 VLSSAASLPGSELPSSRPEGSQGGELS(ph)R ddPTM_A549_PD325901_60min_R1 2 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLSSAASLPGSELPSSRPEGS(0.073)QGGELS(0.927)R;VLSSAASLPGSELPSSRPEGS(0.002)QGGELS(0.998)R 143.09 5.8677999999999995e-36 20728400.0 5131.8 5005.1 4813.2 5486.9 6428.799999999999 5423.6 5617.2 6646.4 6305.2 5829.799999999999 5786.9 True False 5652.776558168511 5426.8973423999805 5139.852696122864 5825.81335134597 5977.263266155996 5379.431999788847 5830.965619849782 6513.832338000067 6040.214370923637 5461.705433080104 5075.147986181536 1.1138151189994312 1.069308196958232 1.0127493247719088 1.1479100446348212 1.1777515222079658 1.0599556928065559 1.148925240352826 1.283476335219335 1.1901553190901537 1.076166734044224 1.0 12.309234175101277 -4.821389473864803 17.294927152266556 1.1081351095920369 8.105731687243164 0.0 0.0804569889604921 7404.7680277521085 705673.1493527443 0.012945896773663373 32594.513088123716 1.5087265262974277e-05 4.821389473864803 6.9975965776511275 VLSSIEQK ddPTM_A549_MK2206_60min_R1 2 VLSSIEQK 8 0 P31947-2;P31947 P31947-2 SFN 14-3-3 protein sigma 0 ; 152.63 0.0014779 20801000.0 10496.0 11535.599999999999 11521.4 11035.7 15472.099999999999 12144.0 12260.2 11516.2 17195.5 16199.4 15934.4 False True 12267.468197437427 12122.712767468645 13155.307765993408 13739.446995411403 13196.174585766941 13429.070019465215 14487.719641400696 13148.656616883361 13300.746705570964 12539.944289028084 11977.448712932463 1.0242137947284067 1.0121281299563685 1.0983397283754737 1.1471096495346669 1.101751708735649 1.1211962030749827 1.2095831081086414 1.0977844223775557 1.1104824595249314 1.0469628874710417 1.0 13.54803301545712 -10.59204140423199 0.890605353605333 1.0003810862459588 1.104329107341142 0.23806389536644756 0.052326168833040226 0.5461691620311372 0.7774030238085251 0.03607068748003084 0.010042780920573197 2.5583419712254074e-11 10.59204140423199 0.10394802109518331 VLSSIEQK ddPTM_A549_PD325901_60min_R1 3 VLSSIEQK 8 0 P31947-2;P31947 P31947-2 SFN 14-3-3 protein sigma 0 ;; 150.05 0.0018102999999999997 48567200.0 15411.600000000002 13516.300000000001 15215.2 15601.8 17787.2 17001.1 15866.2 16787.4 17473.8 16716.100000000002 17592.4 False True 16976.174286579724 14655.36603645898 16247.794968430278 16565.487751741333 16537.888434508757 16862.648678296744 16469.996923317787 16452.562137539473 16739.43695277634 15660.64259321252 15428.646327411936 1.100302251171466 0.9498802244511187 1.0530927097319593 1.0736838086896567 1.0718949727382137 1.0929441456141897 1.067494618374633 1.0663645914488529 1.0849582392095887 1.0150367220090073 1.0 13.913323868392622 -4.940145074913999 21.869172740751612 1.0474389504039672 2.177100618670866 0.1210683095515579 0.040872025963251735 1027.7396563700006 536223.4487855665 0.00602274772762393 23851.387930011504 1.1477701478929413e-05 4.940145074913999 1.1296616682668987 VLSST(ph)SEEDEPGVVK ddPTM_A549_MK2206_60min_R1 1 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLSS(0.001)T(0.499)S(0.499)EEDEPGVVK 201.3 1.2334999999999998e-38 5784000.0 8010.3 7697.7 7608.9 7469.3 9656.5 7644.1 6738.4 7870.5 10984.0 10214.0 10251.0 True False 9362.2428069677 8089.480050464944 8687.956434171821 9299.278835309617 8236.0416418882 8452.993588257086 7962.680056737612 8986.167477395365 8496.141537843701 7906.650306068916 7705.393786792775 1.2150245744759733 1.0498464159392478 1.127516214559103 1.2068531593088465 1.0688670650427974 1.0970229195483447 1.0333904115823167 1.1662178113204111 1.102622626815814 1.0261189142106013 1.0 12.91165297271117 -14.99999999987762 0.1691030893576242 0.525474275355228 1.145597720503641 0.36467678776148416 0.05542212763746236 38.942926130515154 0.4164592032288023 6.092577184307271 0.07134638397283427 1.000000000281791e-15 14.99999999987762 0.620123445148413 VLSSTINNQAVETDEGIEEEIPDS(ph)PGIEKHDK ddPTM_A549_PD325901_60min_R1 1 VLSSTINNQAVETDEGIEEEIPDSPGIEKHDK 32 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 VLSSTINNQAVET(0.003)DEGIEEEIPDS(0.997)PGIEKHDK 124.91 4.4636e-22 19091000.0 1309.8 1535.1 1510.1 1585.7 1798.0 1566.5 1391.9 1719.0 1324.7 1869.8 1848.4 True False 1442.769931776202 1664.4682644339182 1612.584466968989 1683.6450876140095 1671.7146827632657 1553.7429433714196 1444.869516176905 1684.7131964705886 1269.0274657683397 1751.740508897936 1621.0585179729992 0.890017180613731 1.026778642460853 0.9947725199861346 1.0386084579594757 1.0312488193539169 0.9584743093137982 0.8913123740798673 1.0392673538874984 0.7828387758358992 1.080615221150896 1.0 10.662720455755446 -7.556457103871075 4.1213788908660565 0.9074505899023122 1.0001758256204265 0.0 0.08898929999226905 0.2839443221056033 10.740079936792146 0.01403359997840283 0.02152300314821671 2.776789101537974e-08 7.556457103871075 0.09272523571811431 VLSSTINNQAVETDEGIEEEIPDS(ph)PGIEKHDKEK ddPTM_A549_MK2206_60min_R1 3 VLSSTINNQAVETDEGIEEEIPDSPGIEKHDKEK 34 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 VLSSTINNQAVETDEGIEEEIPDS(1)PGIEKHDKEK;VLSSTINNQAVET(0.348)DEGIEEEIPDS(0.652)PGIEKHDKEK;VLSSTINNQAVETDEGIEEEIPDS(1)PGIEKHDKEK 244.7 4.542799999999999e-132 32386500.0 2444.09 3144.92 2647.43 2430.8599999999997 4077.2000000000003 2687.0 2649.04 2549.88 4184.87 4099.86 4139.62 True False 2856.59263973655 3304.9829949606024 3022.8753831065624 3026.420809125451 3477.449281034183 2971.3365565137533 3130.336278270836 2911.333298679993 3237.0036268641643 3173.6987785235665 3111.6381063001736 0.9180349841945856 1.0621360460488516 0.9714739567516247 0.9726133649661308 1.1175622492838568 0.9549107110166989 1.0060091088140373 0.9356272160266257 1.0402892355348656 1.0199446947566742 1.0 11.603458564585809 -5.239185329572284 23.5579790581685 1.0116312612564098 0.9180347643773122 0.21169306624614392 0.049505039249058094 2868.2784803173677 3036237.287355312 0.006256476088278369 0.3982742270698847 5.76520388246701e-06 5.239185329572284 -0.09359649687909755 VLSSTINNQAVETDEGIEEEIPDS(ph)PGIEKHDKEK ddPTM_A549_PD325901_60min_R1 2 VLSSTINNQAVETDEGIEEEIPDSPGIEKHDKEK 34 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 VLSSTINNQAVETDEGIEEEIPDS(1)PGIEKHDKEK;VLSSTINNQAVET(0.001)DEGIEEEIPDS(0.999)PGIEKHDKEK 149.41 1.5603e-40 49401000.0 2997.5 2902.1 2375.0 2701.0 2785.3 2924.0 2674.8999999999996 2783.7 3090.2 3117.0 3693.6 True False 3301.803993357131 3146.670151920835 2536.181782035196 2867.83463558393 2589.6701367633614 2900.1879134491096 2776.6947832614437 2728.176919729595 2960.3296404599714 2920.1920880494517 3239.3106156595286 1.0192921843911775 0.9714011792228724 0.7829387431309441 0.8853225194645418 0.7994510079534625 0.8953102241658992 0.8571869489262006 0.8422091128096815 0.9138764359765615 0.9014856660959314 1.0 11.661471098638279 -9.870478229309505 0.845708664891671 0.9906234804042736 0.8794720768170322 0.06683685983857601 0.07054098286348953 0.4871805871256501 0.7182660587459108 0.026076201860151967 0.013658302071185376 1.3474782712109711e-10 9.870478229309505 -0.1111514035872414 VLSSTS(ph)EEDEPGVVK ddPTM_A549_MK2206_60min_R1 1 VLSSTSEEDEPGVVK 15 0 Q8NI08-2;Q8NI08;Q8NI08-7;Q8NI08-4;Q8NI08-3 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 VLS(0.001)S(0.006)T(0.045)S(0.948)EEDEPGVVK 139.77 2.0867e-10 5756700.0 2993.4 2995.4 3007.3 3050.0 4445.8 2901.2 2692.3 3128.3 5152.9 3814.5 3910.3 True False 3498.612738396456 3147.853065612155 3433.780360431195 3797.2501369197007 3791.828709315647 3208.203058339302 3181.456060304324 3571.746105016954 3985.7763774904265 2952.8018007146957 2939.2645912102003 1.1903020738109025 1.070966212101399 1.168244727167412 1.2919048350649633 1.2900603506928294 1.0914985564529835 1.0823986618347976 1.215183592419061 1.3560454507599604 1.004605645080398 1.0 11.521239520223288 -11.112298617592211 1.477222821021363 1.0006463659133213 1.2127753386828608 0.398899487687017 0.08906630480437605 0.3613104444950155 1.417348092288341 0.0742353727480419 0.016316035088918854 7.721494783985377e-12 11.112298617592211 0.21212897276953946 VLSTS(ph)PTISK ddPTM_A549_PD325901_60min_R1 2 VLSTSPTISK 10 0 A0A087WX19;A0A087WX45;Q6IPM2-2;Q6IPM2-3;Q6IPM2-4;Q6IPM2;H7C427 A0A087WX19 IQCE IQ domain-containing protein E 1 VLS(0.007)T(0.075)S(0.912)PT(0.007)ISK;VLS(0.001)T(0.125)S(0.847)PT(0.027)ISK 171.74 1.662e-10 23233000.0 9900.9 11517.3 9376.3 11952.1 12927.5 11398.7 9938.3 11015.6 11714.8 11425.5 12081.2 True False 10906.032079342647 12487.903290967857 10012.632102272253 12690.354071811436 12019.516997453899 11305.872766426937 10316.507444946426 10795.885216428982 11222.46769531437 10704.09198011197 10595.288989036688 1.0293284204543638 1.1786279075435813 0.9450079287721808 1.1977355299079226 1.1344208742103126 1.0670660118969397 0.9736881604287787 1.0189325866996037 1.0591941104132832 1.0102689970219656 1.0 13.371135317647848 -7.5283090705926154 24.17877457869637 1.0239791889490193 1.0989110153666204 0.25581475659294406 0.06773453028942118 108.99147971391548 485286.9545907168 0.009752487604984442 0.014493144838403962 2.9627221842559977e-08 7.5283090705926154 0.0749318264176011 VLSTS(ph)TDLEAAVADALK ddPTM_A549_PD325901_60min_R1 1 VLSTSTDLEAAVADALK 17 0 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLST(0.001)S(0.936)T(0.063)DLEAAVADALK 335.62 3.222099999999998e-195 18231000.0 4573.8 4981.4 4388.4 4897.2 5612.3 4658.7 4689.5 5017.5 5680.7 5033.8 6096.1 True False 5038.128808946401 5401.200060224817 4686.223213592948 5199.688921651844 5218.111409383913 4620.761091787064 4867.961488692867 4917.4220263473935 5441.959934166388 4715.965008926318 5346.318346361828 0.9423548098991991 1.0102653284573553 0.8765327670362026 0.9725737572642367 0.9760195841938295 0.8642884303609594 0.9105259308034878 0.9197772575016415 1.0178892429534512 0.8820958093779683 1.0 12.384330030032718 -8.763794270051086 24.99917501883851 1.0084477019571148 0.9342406438051122 0.0 0.05574364952241391 44.008726252785124 467187.82721114403 0.006922821022822409 0.007542751061000877 1.7226844358030533e-09 8.763794270051086 -0.07420705815200257 VLSTSS(ph)TLTR ddPTM_A549_PD325901_60min_R1 1 VLSTSSTLTR 10 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 VLSTS(0.038)S(0.614)T(0.348)LTR 167.12 6.774600000000001e-10 10523000.0 3225.6 3614.2 3552.2 3211.0 3461.8 3729.3 3500.8 3961.6 4003.6 3886.4 4075.4 True False 3553.060537438784 3918.7813180360013 3793.2736531138626 3409.3361772898943 3218.655110561666 3698.9298172454733 3634.0248597112645 3882.582780184921 3835.3426148940353 3641.0120407428262 3574.1516360891383 0.9940989916495451 1.0964227926053969 1.0613074204273238 0.9538868308957406 0.9005368093681501 1.0349112723412228 1.0167517301217919 1.0862949240825357 1.0730777553385211 1.0187066502659208 1.0 11.803385127769282 -7.484138655596554 24.981781461194384 1.038315205450041 1.003291195313997 0.10761398433473357 0.053044707218779706 1212.071403877232 781611.3312728785 0.00888841336372379 0.014207759702723944 3.279905600594193e-08 7.484138655596554 -0.03502401013604417 VLSTSST(ph)LTR ddPTM_A549_PD325901_60min_R1 1 VLSTSSTLTR 10 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 VLSTS(0.017)S(0.224)T(0.759)LTR 169.21 2.2502000000000001e-10 14475000.0 2476.5 2924.9 3465.2 3534.8 3698.8 3061.5 3154.2 3870.7 3581.1 3783.6 3782.0 True False 2727.9124568970574 3171.3915879374426 3700.369309940363 3753.136567886739 3439.009048167276 3036.568159037089 3274.234807044469 3793.495851994594 3430.5988206107077 3544.7028502867834 3316.8379760732996 0.8224436878061037 0.9561490825946083 1.1156316156030974 1.131540519905033 1.0368335966288624 0.9155009020464686 0.9871554868413358 1.1437085197889572 1.034297980594182 1.068699428750284 1.0 11.695592824426036 -5.390902338596964 3.4819398564345523 1.0305268760280881 0.8204968229189639 0.49033610569382846 0.06643152709704246 0.17532075979010608 3.413785677390136 0.009296961928473542 0.07643334633825845 4.065347378540589e-06 5.390902338596964 -0.21003005310912426 VLT(ph)GTPLRPGVSIVSGNTVLAAK ddPTM_A549_MK2206_60min_R1 1 VLTGTPLRPGVSIVSGNTVLAAK 23 1 Q9HCK8;A0A2R8Y840;A0A2R8Y808;A0A2R8Y4P3 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 VLT(0.526)GT(0.474)PLRPGVSIVSGNTVLAAK 68.23100000000001 0.00018234 1740400.0 1426.9 1460.4 1795.3 1314.4 2073.9 2022.1 1910.3 1678.2 2549.1 2123.4 2424.5 True False 1667.7258356443856 1534.728122127259 2049.900535723781 1636.428059005658 1768.832057278718 2236.077279838653 2257.376782676283 1916.0899892719533 1971.732920076237 1643.722465234652 1822.4297372040844 0.9151111845897331 0.8421329452633887 1.1248173215548356 0.897937531197343 0.9705899882825691 1.226975852176981 1.2386632727687383 1.0513930661664683 1.0819253438550718 0.9019401031923461 1.0 10.831647477957075 -5.755160162172129 24.999458767989818 1.0565224512170863 0.878622011720029 0.28133851335508986 0.10864975122167317 134.28843503092665 534626.9681328649 0.014121173394136068 0.052102958910670794 1.7572754340576399e-06 5.755160162172129 -0.17790043949705736 VLT(ph)PEEQLADK ddPTM_A549_MK2206_60min_R1 1 VLTPEEQLADK 11 0 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 VLT(1)PEEQLADK 107.09 0.00015376 2195800.0 1419.8 1438.0 1380.0 1185.5 2946.6 2560.8 2083.9 2093.7 2590.9 1740.3 2190.2 True False 1659.427529222719 1511.1880578053947 1575.7047509044828 1475.9475532191182 2513.1590433374167 2831.7821562785352 2462.517655561485 2390.4883866873356 2004.0652868171214 1347.1650213091586 1646.3128935551197 1.0079660650894127 0.9179227495097055 0.9571113468605822 0.8965170345182032 1.5265379097592997 1.7200753072907433 1.495777421899319 1.4520255511849944 1.2173052247009106 0.8182922132135113 1.0 10.685022841005301 -6.718323624653492 24.998280279134008 1.2338968279177684 0.9438271942221161 0.3120254338082673 0.24736429384789022 179.91822478909606 104314.70189721839 0.039255786884251756 0.08171700954096953 1.912830003956062e-07 6.718323624653492 -0.2900696336956523 VLT(ph)PEEQLADK ddPTM_A549_PD325901_60min_R1 2 VLTPEEQLADK 11 0 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 VLT(1)PEEQLADK;VLT(1)PEEQLADK 103.75 0.00021872 7416700.0 7065.700000000001 6682.7 6817.200000000001 7631.3 7368.200000000001 5977.0 6854.8 6896.200000000001 6551.700000000001 6648.6 6942.299999999999 True False 7783.004662506581 7245.874581937688 7279.856187153829 8102.668069060215 6850.683050910065 5928.325293668031 7115.663165090492 6758.649881035759 6276.354833150474 6228.806261342823 6088.441110865589 1.2783247009841041 1.1901034189205697 1.195684749937387 1.3308280266684334 1.125194926938549 0.973701672680744 1.1687167594331653 1.1100788786433524 1.0308640124562476 1.0230543661211957 1.0 12.571857171329492 -7.209391247689149 0.41848436106253384 1.0023495331841927 1.2854398699082965 0.5902839333087754 0.07085066620813397 0.7256591481463924 0.22285473368119302 0.022326923260081434 0.08163233374624049 6.174598915577466e-08 7.209391247689149 0.2830903367241038 VLT(ph)PEEQLADKLR ddPTM_A549_MK2206_60min_R1 1 VLTPEEQLADKLR 13 1 O75822-2;O75822-3;O75822 O75822-2 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 VLT(1)PEEQLADKLR 61.097 0.0030719000000000002 6766200.0 331.58 339.94 369.58 342.05 970.01 460.07 448.21 679.17 916.87 414.39 679.59 True False 387.5425976473228 357.24149399886386 421.9920013328107 425.85226535520826 827.3228139644768 508.75430203025064 529.6439552757874 775.4444273708923 709.2004089405276 320.77901119364606 510.82904727016853 0.7586541911003708 0.6993366878957552 0.8260924150415951 0.8336492758799255 1.6195688526046568 0.9959384744250446 1.0368321028456866 1.5180116156565648 1.3883321880978392 0.6279576561040618 1.0 8.996696753110468 -6.5537692484951675 24.58010648852381 1.2130562841349062 0.7676105714822564 0.3311944912704172 0.26338047506806284 105.37211414325054 83846.07140783437 0.031038138617064254 0.06461158568927391 2.794027983770647e-07 6.5537692484951675 -0.44544571265264976 VLT(ph)PIKEK ddPTM_A549_MK2206_60min_R1 1 VLTPIKEK 8 1 Q8N960;Q8N960-2;D6REX9 Q8N960 CEP120 Centrosomal protein of 120 kDa 1 VLT(1)PIKEK 49.5 0.013168000000000001 3833200.0 1878.1 2229.7 2391.7 1942.6 3042.7 2261.5 2269.9 2286.4 3904.8 2833.5 3512.0 True False 2195.0773648634945 2343.182206181285 2730.8790237233684 2418.5370872066264 2595.1228606403183 2500.8104289377934 2682.311447938486 2610.504201806336 3020.3690346842773 2193.410382048783 2639.8734737309733 0.8315085502037938 0.8876115577121315 1.0344734514354492 0.9161564413117388 0.9830481977503989 0.9473220795704879 1.0160757606869446 0.9888747425901707 1.144134014277413 0.8308770870555409 1.0 11.366253069096103 -7.892630326062014 1.1954148520956327 1.0656549981738246 0.9294885913013735 0.0 0.09270103058783366 0.32765625872397997 0.9431499236036207 0.0127332103652002 0.01964338653773715 1.2804707844347852e-08 7.892630326062014 -0.13616640687245107 VLT(ph)PIKEK ddPTM_A549_PD325901_60min_R1 1 VLTPIKEK 8 1 Q8N960;Q8N960-2;D6REX9 Q8N960 CEP120 Centrosomal protein of 120 kDa 1 VLT(1)PIKEK 58.37 0.005841 4933800.0 3036.1 3290.9 3012.2 3073.9 4103.5 3898.5 2708.0 3505.8 3597.4 3765.3 3869.1 True False 3344.32263694131 3568.2356924145524 3216.62600583007 3263.7678216665827 3815.2843163064863 3866.751908543554 2811.054421874459 3435.874068753105 3446.2137882954844 3527.5583154098836 3393.225228245689 0.9855881681836777 1.0515764361033426 0.9479553491039787 0.9618482718148255 1.1243828687077762 1.1395506187906896 0.8284314281512594 1.0125688210002688 1.0156159867045402 1.0395886149984939 1.0 11.728441478014526 VLT(ph)PPQAAGDGILATTANQR ddPTM_A549_MK2206_60min_R1 2 VLTPPQAAGDGILATTANQR 20 0 Q96QT6;Q96QT6-5;Q96QT6-3;C9J9G2;Q96QT6-4;Q96QT6-2;K7EPF7 Q96QT6 PHF12 PHD finger protein 12 1 VLT(1)PPQAAGDGILATTANQR;VLT(1)PPQAAGDGILATTANQR 106.16 1.1635e-09 14024500.0 2224.8 2548.67 2642.5 2010.54 3409.3 3008.3 3610.3999999999996 2487.1000000000004 3462.0 4393.7 4545.700000000001 True False 2600.291848862309 2678.3864167502625 3017.2462349747075 2503.122390256569 2907.7964862724016 3326.636309252074 4266.362946225436 2839.6540414243086 2677.8625276779767 3401.1601184428246 3416.877235062326 0.7610141278063443 0.7838696659236009 0.8830420373354945 0.732576038896203 0.8510099386755877 0.9735896493780217 1.2486146421785667 0.8310670375526418 0.7837163419859101 0.9954001517940944 1.0 11.738462698789094 -7.01956197234129 6.802564327022316 0.9235566565230288 0.79554842060514 0.2958131763555384 0.1206962254785257 0.2439283262914641 49.913155779658744 0.020035520443829787 0.0359714054213521 9.559562735869132e-08 7.01956197234129 -0.1280082359178888 VLT(ph)PTQVK ddPTM_A549_MK2206_60min_R1 2 VLTPTQVK 8 0 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 VLT(0.792)PT(0.208)QVK;VLT(0.834)PT(0.166)QVK 92.538 0.0027369 9780600.0 4395.7 4678.1 4284.6 4169.3 6066.0 4446.0 4649.3 4259.1 6392.0 6014.7 6941.7 True False 5137.586695453095 4916.195308219346 4892.22070704735 5190.778687166992 5173.6994355816105 4916.472768984053 5494.017628486014 4862.840467946713 4944.222205926525 4655.975092609431 5217.884308826397 0.9846110782415254 0.9421817382771933 0.9375870405504841 0.9948052467139692 0.9915320327876866 0.9422349132324598 1.052920552338142 0.9319563601134078 0.947553052788665 0.8923109093725097 1.0 12.349249241670508 -6.258753788116266 24.89727675944042 0.9770526091960666 0.9535321325456408 0.0 0.042053687877871254 466.22690573435875 4322210.475779354 0.004745555120864568 0.01200710817104905 5.511200509372368e-07 6.258753788116266 -0.02352047665042578 VLTANSNPS(ph)SPSAAK ddPTM_A549_MK2206_60min_R1 1 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.75)S(0.249)PS(0.001)AAK 231.17 1.6333e-54 50762000.0 2915.7 2952.5 3134.3 3283.0 5206.0 3974.4 3971.5 3187.4 5579.9 4971.5 4310.0 True False 3407.798877979069 3102.7696388528702 3578.790870115883 4087.3351473794723 4440.204296346499 4394.968370006795 4693.070142071323 3639.2237110031097 4316.0615592693075 3848.4346971432965 3239.7080500513944 1.051884560377287 0.9577312495191189 1.1046646224986567 1.2616368772225113 1.3705569229536163 1.3565939591183453 1.448608970180777 1.1233184147396793 1.3322378105029673 1.1878955256731376 1.0 11.661648093537206 -6.013893707288468 4.308608872961602 1.2132190947371162 1.0070643662933105 0.35345901744207175 0.12654486439282417 0.24389401243246422 10.969151101621067 0.023178539459300103 0.07084969787892877 9.685148693457237e-07 6.013893707288468 -0.20615472844380567 VLTANSNPS(ph)SPSAAK ddPTM_A549_PD325901_60min_R1 2 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.5)S(0.5)PSAAK;VLTANSNPS(0.494)S(0.494)PS(0.012)AAK 257.37 5.5888999999999985e-77 25225000.0 10953.2 11449.9 11547.1 11869.2 13419.6 13182.900000000001 12587.3 13047.0 12858.3 13243.0 12814.8 True False 12065.160800680344 12414.823256427544 12330.755644353101 12602.333527091005 12477.053591106744 13075.542833176572 13066.31658953486 12786.767349826509 12317.910366942737 12406.834719935478 11238.660839710239 1.0735407868213072 1.1046532530425244 1.0971730369141577 1.1213376492831262 1.110190419397729 1.163443137902691 1.1626221999125423 1.1377483075782704 1.0960300824649072 1.1039424444679085 1.0 13.456182518755115 -10.07853409040338 0.786460953272418 1.0058104084612352 1.1211275688479738 0.1724205861351472 0.039019984925896097 0.245801256990818 0.30252586676726734 0.014497162541219825 0.006093043063999561 8.34576034780057e-11 10.07853409040338 0.11531716038673867 VLTANSNPSS(ph)PSAAK ddPTM_A549_MK2206_60min_R1 1 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.239)S(0.737)PS(0.024)AAK 255.49 8.113099999999998e-77 55619000.0 6437.2 6629.2 5658.9 6586.6 9977.0 7486.9 7560.1 7488.7 10362.0 9185.6 9723.9 True False 7523.6419855701415 6966.59796439745 6461.417112241573 8200.317295683706 8509.396516451978 8279.158788597995 8933.672310480533 8550.246158181903 8015.0235447138075 7110.566580323742 7309.187264012702 1.0293404333219538 0.9531289475504322 0.8840130754420282 1.1219191682307204 1.1642055688391773 1.1327057974504247 1.2222524868758113 1.1697943764937644 1.0965683673445255 0.9728258865842878 1.0 12.835495281077142 -6.271430814435093 24.493770683955564 1.0867825196994252 0.955257629566605 0.4208222456768064 0.0773202392690361 466.6415798728775 1143961.4153418918 0.01238798705216402 0.02911720345958191 5.352654177851063e-07 6.271430814435093 -0.1315248901328202 VLTANSNPSS(ph)PSAAK ddPTM_A549_PD325901_60min_R1 2 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.244)S(0.75)PS(0.006)AAK;VLTANSNPS(0.018)S(0.976)PS(0.007)AAK 291.59 2.1902999999999996e-123 137192000.0 15102.1 13283.1 14645.7 14195.9 16050.400000000001 12891.0 13520.3 14442.4 14657.900000000001 14011.699999999999 13760.1 True False 16635.25407442158 14402.513454043506 15639.645273748574 15072.7485017719 14923.075274874032 12786.019969997422 14034.822415092032 14154.33500215638 14041.879437220323 13126.998870748319 12067.694932460652 1.3784947471347442 1.1934767604459797 1.2959927609439152 1.2490163685881728 1.2366135669151488 1.059524626828655 1.1630077238147647 1.1729112379268816 1.1635925100699513 1.0877801389756934 1.0 13.558862510729968 -2.0000086486207826 0.025493464645222015 5.658862560717387e-09 2.8426078188259423 0.6544626106385162 0.06062227644807685 552.065028493257 1.0523311492732987 39.69149636724225 86.03388270210286 0.00999980086012997 2.0000086486207826 2.8426078131670796 VLTANSNPSS(ph)PSAAKR ddPTM_A549_PD325901_60min_R1 2 VLTANSNPSSPSAAKR 16 1 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.022)S(0.974)PS(0.004)AAKR;VLTANSNPS(0.079)S(0.907)PS(0.013)AAKR 153.36 6.922500000000001e-16 43402000.0 7532.7 8653.0 7966.0 8622.5 10600.4 10736.0 10215.900000000001 10532.8 11836.900000000001 9763.5 12113.5 True False 8297.41415871935 9382.21867770614 8506.620663449417 9155.092241881686 9855.864473394728 10648.569575509453 10604.671664854988 10322.71504117825 11339.436256928557 9147.03094375066 10623.616293803252 0.7810348123697978 0.8831473594522405 0.8007274009332701 0.8617679694645829 0.9277315935387883 1.0023488500540778 0.9982167438634513 0.9716761934633766 1.0673800656319676 0.8610091602316358 1.0 13.374987324699326 -6.998544480116048 1.1629708961177947 1.0268983130310139 0.8205068182911565 0.539192145388518 0.05981431072471758 0.12406585961165241 0.33025483740352224 0.005838831828864193 0.01461371364336573 1.0033570808033482e-07 6.998544480116048 -0.2063914947398574 VLTEIIAS(ph)RTPEELR ddPTM_A549_PD325901_60min_R1 1 VLTEIIASRTPEELR 15 1 P08758;D6RBL5;E9PHT9 P08758 ANXA5 Annexin A5;Annexin 1 VLT(0.013)EIIAS(0.493)RT(0.493)PEELR 56.958999999999996 0.0031362 974040.0 266.33 382.25 281.72 268.25 310.48 221.47 287.37 267.24 226.97 380.14 200.21 True False 293.36762553821654 414.46354900649175 300.83921331998124 284.8191932600479 288.67295589785243 219.66642174814447 298.30602260489803 261.90968855427576 217.43124020943628 356.1378955249017 175.58543923575758 1.6707970023887544 2.3604665102667988 1.7133494362026576 1.622111688188579 1.6440597646041304 1.2510514693259935 1.6989223246716045 1.4916367193899893 1.2383215895111472 2.028288319777572 1.0 7.456029401314553 -6.472785565049075 0.18692932980851892 0.8559016854212543 2.6024709162630772 0.0 0.3746483466780009 3.4502163130630232 0.17930114876607386 0.32365234691489386 1.504044414730347 3.3667776457813774e-07 6.472785565049075 1.746569230841823 VLTEIIASR ddPTM_A549_MK2206_60min_R1 2 VLTEIIASR 9 0 P08758;D6RBL5;E9PHT9 P08758 ANXA5 Annexin A5;Annexin 0 ; 72.928 0.0067263 4448800.0 1331.99 2335.2 1685.3899999999999 1630.56 2192.3 1870.79 1530.9 1611.3200000000002 2651.6 2500.0 2406.5 False True 1556.7973479711006 2454.051705554352 1924.4036450194978 2030.0472731986204 1869.8155741222504 2068.7557560701034 1809.0447137094268 1839.7295444605413 2051.016833735103 1935.2482636745924 1808.899633978813 0.8606322422360194 1.356654432040808 1.0638531894589558 1.1222553396914434 1.0336756882466984 1.1436542510209464 1.0000802033058598 1.0170434610647334 1.1338477797265814 1.0698483361500084 1.0 10.820896647525618 -6.747194217254488 24.354978860154052 1.060642283949606 1.116478108641773 0.025280305698479055 0.1160926847806695 457.9313233472983 782919.6794642804 0.015425652215525878 0.031983154988981397 1.7898052709792986e-07 6.747194217254488 0.05583582469216708 VLTEIIASR ddPTM_A549_PD325901_60min_R1 2 VLTEIIASR 9 0 P08758;D6RBL5;E9PHT9 P08758 ANXA5 Annexin A5;Annexin 0 ; 84.615 0.0037093000000000004 6851100.0 2259.4 2167.8900000000003 2078.64 2701.6000000000004 2748.6 2805.6 2809.8 2829.7 2838.0 2270.03 2685.8 False True 2488.7726247176297 2350.5856985106175 2219.7090102777433 2868.471696221233 2555.547818155235 2782.752123793715 2916.7284765815566 2773.259413643295 2718.7287294108487 2126.699918394256 2355.4636266889647 1.0565956512841828 0.997929100613961 0.9423660739766764 1.2177949443665979 1.0849447171245539 1.1814031396041476 1.2382821129280406 1.1773730582040949 1.1542223359366919 0.9028795411218988 1.0 11.201795338595064 -6.2440572421323015 24.990142986110037 1.1099535562669098 0.9988601605545411 0.23345497649522806 0.09621418482147524 989.8597355662486 1423110.2651581657 0.012905738091533326 0.034055599241603535 5.700891267993373e-07 6.2440572421323015 -0.11109339571236876 VLTFLR ddPTM_A549_PD325901_60min_R1 1 VLTFLR 6 0 A0A0A0MSM0;Q92598-2;Q92598-3;Q92598;Q92598-4;A0A3B3IRH7;Q8TDX9 A0A0A0MSM0 HSPH1;PKD1L1 Heat shock protein 105 kDa;Polycystic kidney disease protein 1-like 1 0 81.672 0.013549 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VLTGT(ph)PLRPGVSIVSGNTVLAAK ddPTM_A549_PD325901_60min_R1 1 VLTGTPLRPGVSIVSGNTVLAAK 23 1 Q9HCK8;A0A2R8Y840;A0A2R8Y808;A0A2R8Y4P3 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 VLT(0.3)GT(0.697)PLRPGVS(0.002)IVS(0.001)GNTVLAAK 55.783 0.0018849000000000001 4237100.0 4868.6 5313.6 5297.9 4465.0 4930.4 5271.0 5130.3 4765.5 4265.7 5122.2 5244.1 True False 5362.856687926114 5761.395720080823 5657.447352860742 4740.792909249257 4584.105712956618 5228.074723594478 5325.536373907881 4670.448364037572 4086.427463371334 4798.783417839879 4599.1089450888385 1.1660642859206116 1.2527199918221403 1.2301181425375998 1.0308068292906425 0.9967377958836479 1.1367581820772654 1.157949602301715 1.0155115740462972 0.8885259105973187 1.0434159040664308 1.0 12.1671386577828 -6.929860899282134 0.4597982021230827 0.9490329576329039 1.249999246255085 0.41486281918472345 0.08214399535038673 0.8704801805317688 0.2922895147800246 0.02366427541795689 0.11193191381939634 1.1752739246042855e-07 6.929860899282134 0.3009662886221812 VLTLS(ph)DDLER ddPTM_A549_MK2206_60min_R1 2 VLTLSDDLER 10 0 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VLT(0.005)LS(0.995)DDLER;VLT(0.019)LS(0.981)DDLER 104.52 0.00034343 13166900.0 605.19 992.63 986.73 738.48 1172.85 841.76 964.8799999999999 1021.21 1478.7800000000002 1178.5 1287.94 True False 707.3312765250718 1043.1506271344717 1126.6631513478114 919.4076331516266 1000.325318665 930.8344844849339 1140.1862063909814 1165.9696448244604 1143.8386911264122 912.2760314962035 968.1089526643143 0.7306318928034276 1.077513666476936 1.1637772259487356 0.9496943816306442 1.0332776242922077 0.9614976516054334 1.1777457519146957 1.2043785377829814 1.1815185553015242 0.9423278536837676 1.0 9.919025609819226 -7.749353851415854 24.988757465519537 1.1049564892753732 0.9987927339867838 0.1721461765217147 0.12388653810185497 340.2373123942045 703493.0528688958 0.018890715214236697 0.027901248769163143 1.7809271248209226e-08 7.749353851415854 -0.10616375528858935 VLTLS(ph)DDLER ddPTM_A549_PD325901_60min_R1 2 VLTLSDDLER 10 0 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VLT(0.079)LS(0.921)DDLER;VLT(0.158)LS(0.842)DDLER 91.93700000000001 0.00063054 33090000.0 1660.38 1380.49 1385.52 1344.25 1871.09 1577.9 1731.29 1462.68 1455.3200000000002 1756.6 1920.13 True False 1828.9405552928472 1496.8287371300767 1479.5497190085923 1427.2812694867448 1739.671093310077 1565.050105551078 1797.1751883482386 1433.5056999497378 1394.1579614116265 1645.687976216768 1683.966182706935 1.086091023724045 0.8888710192053624 0.8786101135536177 0.8475712185576225 1.0330795898250151 0.9293833341921973 1.0672276004137584 0.8512675103994144 0.8279014007101683 0.9772690171077928 1.0 10.717647451254711 VLTLSDDLER ddPTM_A549_MK2206_60min_R1 1 VLTLSDDLER 10 0 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 0 59.35 0.025963 968660.0 468.8 487.7 654.43 425.29 737.66 591.32 436.36 588.59 863.68 710.83 914.79 False True 547.9219789404214 512.5218468648754 747.23801459016 529.4860690919937 629.151191172293 653.8930899135519 515.6409636646714 672.0244349812768 668.0578590135513 550.2530093071247 687.6223960803975 0.7968355627502828 0.7453536269126273 1.086698191986743 0.7700244670769648 0.9149661133182928 0.9509479238036599 0.7498897165129307 0.9773160950137276 0.9715475569464164 0.800225548853107 1.0 9.425472724392813 -2.0000000000000084 0.10284973092274836 1.072313682324211 0.3012724005027215 0.0 0.11675082719181687 99.7970698935488 0.7012885468352686 0.5594743209746367 10.922399535835869 0.009999999999999806 2.0000000000000084 -0.7710412818214895 VLTLSDDLER ddPTM_A549_PD325901_60min_R1 2 VLTLSDDLER 10 0 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 0 ; 96.89 0.0014594 1581400.0 767.31 773.85 822.65 1045.9 932.84 926.79 1104.1 1399.7 990.21 884.91 1141.9 False True 845.206746336233 839.0650553268116 878.4799759963179 1110.5028675887575 867.3205365232952 919.2425295162446 1146.1171296867021 1371.7818854565924 948.5949172480321 829.0366315803151 1001.453539100502 0.8439799884230189 0.8378472116444399 0.8772049243396374 1.1088910510878045 0.8660616820050544 0.9179083138913278 1.1444536215989969 1.3697908409098205 0.9472180987048614 0.8278333434469157 1.0 9.967879775743683 -7.568900344765647 24.95137018519379 1.0222785835857977 0.9104931836730905 0.19016029019325875 0.1451570606241417 204.39586781642876 110815.79929520484 0.022277894173572503 0.03304346543879238 2.6983585393274792e-08 7.568900344765647 -0.1117853999127072 VLTLSERPLDFLDLERPPT(ph)TPQNEEIR ddPTM_A549_PD325901_60min_R1 2 VLTLSERPLDFLDLERPPTTPQNEEIR 27 2 A0A0A0MS29;Q9GZY8-2;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 VLTLSERPLDFLDLERPPT(0.674)T(0.326)PQNEEIR;VLTLSERPLDFLDLERPPT(0.603)T(0.397)PQNEEIR 245.8 1.2836999999999998e-112 197875000.0 20268.6 21498.3 23406.0 23298.0 26914.0 26556.0 25617.0 25306.0 26688.0 27280.0 25716.0 True False 22326.253351045303 23310.0371892904 24994.471911711935 24737.064546402955 25023.653488259457 26339.736740613724 26591.868953160265 24801.251977827047 25566.39617001996 25557.536144366077 22553.095027155206 0.9899418826623675 1.0335626733813603 1.1082501927836146 1.0968367985244654 1.109544098409977 1.1678989827737252 1.1790784777496013 1.0996828571850086 1.1336092070395025 1.1332163551651493 1.0 14.461037811873979 -5.557188203968522 3.6948896801987603 1.088963956854094 0.9959967990263744 0.30956024532858173 0.049842893666588756 0.2806161630933294 7.821982986213916 0.009133020925127038 0.04808369993185656 2.772118531081836e-06 5.557188203968522 -0.09296715782771969 VLTLSERPLDFLDLERPPTT(ph)PQNEEIR ddPTM_A549_MK2206_60min_R1 3 VLTLSERPLDFLDLERPPTTPQNEEIR 27 2 A0A0A0MS29;Q9GZY8-2;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 VLTLSERPLDFLDLERPPT(0.055)T(0.945)PQNEEIR;VLTLSERPLDFLDLERPPT(0.048)T(0.952)PQNEEIR;VLTLSERPLDFLDLERPPT(0.171)T(0.829)PQNEEIR 244.19 2.1817e-112 403192000.0 43566.0 52097.0 47562.0 44912.0 72712.0 57445.0 51021.0 53353.0 80393.0 70843.0 71481.0 True False 50918.87571356316 54748.51477572164 54307.00678443403 55915.44201617633 62016.16112100393 63523.79177109511 60290.85527347878 60915.95113670982 62184.113861240774 54839.51709739962 53730.29492476194 0.9476753437676904 1.0189505725286918 1.010733457921265 1.0406688088065443 1.154212185282895 1.1822714142933128 1.1221016999423423 1.133735655499563 1.1573380333816639 1.0206442598945513 1.0 15.71344813654709 -6.470218079908657 3.4744509965545265 1.0971302261499931 0.9958760647726028 0.4502063785898919 0.05626952642296117 0.24935864854776849 6.0053325559063815 0.010338624632959066 0.02484349363771522 3.3867404909045827e-07 6.470218079908657 -0.1012541613773903 VLTLSERPLDFLDLERPPTT(ph)PQNEEIR ddPTM_A549_PD325901_60min_R1 1 VLTLSERPLDFLDLERPPTTPQNEEIR 27 2 A0A0A0MS29;Q9GZY8-2;C9JHF5;Q9GZY8-4;Q9GZY8-3;Q9GZY8;Q9GZY8-5 A0A0A0MS29;Q9GZY8;Q9GZY8-5 MFF Mitochondrial fission factor 1 VLTLSERPLDFLDLERPPT(0.297)T(0.703)PQNEEIR 150.31 1.8749e-33 73832000.0 6943.7 8001.8 7637.2 7614.6 9283.9 8780.4 8305.2 8469.3 8191.8 8319.4 8839.1 True False 7648.61931231823 8676.139768319546 8155.506318214407 8084.936547988673 8631.830891716289 8708.895333532339 8621.258930779826 8300.373167462682 7847.527133751859 7794.111664202318 7751.946735671469 0.9866707774348132 1.1192207666230856 1.052059127378406 1.0429556372962308 1.1135049279938847 1.1234462297654035 1.112141146572656 1.0707469298347427 1.0123298574331743 1.0054392696400793 1.0 12.920342942560769 -8.75154935882847 3.9064837737105447 1.0052986813129599 1.0815005203615167 0.40474584944521574 0.038763587334200864 0.1438281176097772 4.766087042467672 0.006577504025577052 0.0072123600351260315 1.7719466468108445e-09 8.75154935882847 0.07620183904855682 VLTPT(ph)QVK ddPTM_A549_PD325901_60min_R1 2 VLTPTQVK 8 0 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 VLT(0.483)PT(0.517)QVK;VLT(0.366)PT(0.634)QVK 64.04 0.010182 6224200.0 4737.6 5013.1 4890.9 4579.3 6269.6 5206.799999999999 5193.1 5696.7 6076.200000000001 5047.7 6503.6 True False 5218.557664363215 5435.571530475983 5222.825885370925 4862.152960655123 5829.244924945815 5164.39754710904 5390.726262273358 5583.074849525303 5820.838444554686 4728.987360554129 5703.698429717161 0.9149427741785423 0.9529906949771056 0.9156910993328793 0.8524561774378788 1.0220114188671927 0.9054471604251937 0.9451282056195031 0.978851690411367 1.020537554059171 0.8291089402475006 1.0 12.477681989190538 -8.357360632482905 2.3183516823938417 1.009620366914881 0.9286314440228667 0.0 0.06673331891690933 0.1864831007533613 1.9608202966926684 0.006302727577011231 0.007814986952690575 4.391767773029369e-09 8.357360632482905 -0.08098892289201443 VLTPTQVK ddPTM_A549_MK2206_60min_R1 1 VLTPTQVK 8 0 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 0 91.318 0.0072384 3733400.0 2556.5 2839.1 2445.7 2941.8 3877.7 2945.0 2875.1 2961.6 4648.6 3508.6 4433.7 False True 2987.9746995759137 2983.5980632234327 2792.537035715283 3662.54113206242 3307.295466758127 3256.637945267216 3397.4684541028005 3381.4158695196134 3595.699522288806 2716.0048231714713 3332.689926105072 0.8965654668833748 0.8952522224923504 0.8379228483998006 1.0989744660532659 0.9923801914039379 0.9771800009829482 1.0194373102310887 1.0146206051252682 1.078918111800192 0.8149587520569839 1.0 11.702471379823942 -6.255098596453302 24.999712778854253 1.0309271760201952 0.8784473781924329 0.2897665412888297 0.07480755850411876 199.0644656945942 784845.7666811214 0.005804919660356255 0.014955618981853285 5.557780664731262e-07 6.255098596453302 -0.15247979782776233 VLTTS(ph)PSR ddPTM_A549_MK2206_60min_R1 1 VLTTSPSR 8 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 VLT(0.014)T(0.106)S(0.879)PS(0.001)R 76.17 0.004703 27547000.0 4133.3 4715.5 3435.9 3656.9 5776.4 4343.9 3706.6 3811.7 6057.4 5593.1 6319.5 True False 4830.8999905171595 4955.4988084710285 3923.162285241095 4552.840664164477 4926.6992119508095 4803.56861475255 4380.041240992464 4352.020147841674 4685.40857168012 4329.614825423347 4750.193740672807 1.016990096457186 1.0432203566857345 0.8258952159465873 0.958453678463991 1.0371575310216723 1.0112363572926995 0.9220763362742516 0.9161773993717703 0.9863615733316362 0.9114606817721312 1.0 12.213770640844157 -8.981187716791496 23.29451691616552 0.9939831304042849 0.9654437400767247 0.0 0.06510325602531833 160.81468116274348 199135.9484548372 0.010847607537293 0.011036619224139108 1.0442687533173292e-09 8.981187716791496 -0.028539390327560143 VLTTS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 VLTTSPSR 8 0 Q86UU1-2;Q86UU1;Q86UU1-3 Q86UU1-2 PHLDB1 Pleckstrin homology-like domain family B member 1 1 VLTT(0.002)S(0.998)PSR;VLTT(0.004)S(0.995)PS(0.001)R 117.81 0.0012561 87090000.0 9817.900000000001 10693.7 9647.400000000001 9500.2 11871.9 10782.0 10322.3 11492.4 10524.400000000001 11548.400000000001 12138.3 True False 10814.605980444025 11594.895628543414 10302.130578528999 10087.005777480363 11038.058699831596 10694.194966760706 10715.12077507929 11263.17506638661 10082.096067586863 10819.232053137728 10645.366051023408 1.015897990600741 1.089196517336172 0.9677572879270402 0.9475489832038828 1.0368885998777313 1.004586870522184 1.0065525904625117 1.058035488155319 0.9470877769034166 1.0163325527070632 1.0 13.37793793863195 -8.776117500840844 24.99486152482217 0.9750136759945065 1.0143974674911012 0.06294527402464667 0.04036258664478113 316.869849402682 539584.3283542306 0.007097329238247537 0.007571222875320664 1.6744897720077453e-09 8.776117500840844 0.039383791496594656 VLTVINQTQK ddPTM_A549_PD325901_60min_R1 1 VLTVINQTQK 10 0 F2Z388;P42766 F2Z388 RPL35 60S ribosomal protein L35 0 120.68 0.00013675 4338500.0 3711.5 3842.4 3800.2 4445.3 5664.8 5089.8 4733.9 4635.7 4732.6 4898.5 4790.1 False True 4088.288747738108 4166.212532903974 4058.1044244590107 4719.876084991206 5266.923990499081 5048.350356317811 4914.051154989475 4543.2373268637 4533.705280059822 4589.20787401676 4200.948066945722 0.9731824061111229 0.9917315012020602 0.9659972843723905 1.1235264063673056 1.2537465130646976 1.2017169162455723 1.1697481322501118 1.0814790505531857 1.0792100277869014 1.092421948780081 1.0 12.03649923567981 -6.25145167642524 24.446732074257678 1.0825557530187537 0.9784464970308723 0.35721304460835845 0.07389864104170792 671.2703948417387 1643051.6971127214 0.013219600866945342 0.03449697455589888 5.604647763300844e-07 6.25145167642524 -0.10410925598788145 VLVDMSR ddPTM_A549_MK2206_60min_R1 1 VLVDMSR 7 0 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 0 70.268 0.059258000000000005 985720.0 450.62 643.57 390.53 432.85 556.37 354.86 468.25 583.3 765.93 648.19 606.42 False True 526.6736393987474 676.3249640902769 445.91302635559936 538.898269431375 474.52871001888235 392.4110496629963 553.3249638738251 665.9845612813308 592.4480779388773 501.76342881249366 455.8291776594352 1.15541888323841 1.4837245995594897 0.9782459048480558 1.182237328901318 1.0410231140873087 0.8608730394967813 1.2138866728869915 1.461039779640674 1.2997151278927443 1.1007707566876674 1.0 8.83234946435009 -11.01854268732513 1.3634009221648569 1.0020055310758016 1.1966369621263173 0.06754603178501484 0.1804454024527524 0.7243619510499347 2.4380492000370713 0.12583265151508077 0.02974847071675548 9.582025288025834e-12 11.01854268732513 0.19463143105051572 VLVNSAS(ph)AQKR ddPTM_A549_MK2206_60min_R1 2 VLVNSASAQKR 11 1 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 VLVNS(0.029)AS(0.971)AQKR;VLVNS(0.378)AS(0.622)AQKR 69.71600000000001 0.0014306 11541400.0 4359.1 6126.9 5083.1 4631.0 6099.0 4813.0 4217.4 4039.0 7293.200000000001 6965.5 6892.5 True False 5094.809510237187 6438.733039894213 5803.9600140018665 5765.595207893491 5201.845179296442 5322.308465389172 4983.646989090171 4611.540618918729 5641.301844847206 5391.988712250149 5180.902026677316 0.9833827167553403 1.2427822426944417 1.120260522997023 1.1128554792593053 1.004042375731347 1.027293787449315 0.9619265068956242 0.8901038072469134 1.0888647991796052 1.040743230519688 1.0 12.338987586458298 -6.704966984685341 5.771761690937541 1.0217189848329014 1.1257587127222786 0.3257570545402534 0.07426854102495464 0.20102446821714737 13.790747877695004 0.010896707915962908 0.022740934977218276 1.9725726865178304e-07 6.704966984685341 0.10403972788937721 VLVNSAS(ph)AQKR ddPTM_A549_PD325901_60min_R1 2 VLVNSASAQKR 11 1 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 VLVNS(0.063)AS(0.937)AQKR;VLVNS(0.002)AS(0.998)AQKR 68.03399999999999 0.0018018 23524000.0 5722.200000000001 5362.6 6199.1 6800.1 7452.1 8095.900000000001 7132.5 7802.4 6990.2 6989.200000000001 7685.3 True False 6303.1135315390065 5814.525122046334 6619.808204216582 7220.126732852381 6928.69020434935 8029.969674587086 7403.931190553757 7646.775011135608 6696.426203075304 6547.900719215668 6740.056821130654 0.9351721652817833 0.8626819144635846 0.9821591093212921 1.0712263894002596 1.027986912903659 1.1913801155818813 1.098496850552031 1.1345267872464095 0.9935266691048414 0.9714904329422624 1.0 12.718545038564454 -5.954366573353108 4.791702044865962 1.0339374863043258 0.9006859385484696 0.43234926692068376 0.06737038199293151 0.17080837701556675 8.7700860652603 0.010491479782059075 0.03379278319187037 1.1107937478674237e-06 5.954366573353108 -0.13325154775585624 VLVQHCPART(ph)PQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAAR ddPTM_A549_MK2206_60min_R1 1 VLVQHCPARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAAR 43 2 I3VM54;Q9Y2K7;Q9Y2K7-2;Q9Y2K7-4;Q9Y2K7-5 I3VM54;Q9Y2K7-5 KDM2A Lysine-specific demethylase 2A 1 VLVQHCPART(1)PQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAAR 128.83 2.1513999999999996e-30 3540800.0 491.96 418.16 340.34 262.99 586.44 389.82 474.62 417.97 583.15 631.55 654.22 True False 574.9908207327857 439.4425578942311 388.6053296542258 327.4225618060699 500.17545285237026 431.07049365842647 560.8523104192096 477.2185274794408 451.06745609919506 488.88241636947555 491.7591184465484 1.1692529922966421 0.8936134408293562 0.7902351274783024 0.6658189945524293 1.0171147500678965 0.8765887148573159 1.1405021063786767 0.9704314766688193 0.9172528564881581 0.9941501805067483 1.0 8.941807993708425 VLVSLSAGGRDEGNYLDDALVR ddPTM_A549_PD325901_60min_R1 1 VLVSLSAGGRDEGNYLDDALVR 22 1 Q6P452;P09525;P09525-2 Q6P452 ANXA4 Annexin;Annexin A4 0 74.579 0.00020395 4147200.0 2201.4 2265.1 2383.2 2637.6 2619.1 2645.3 2680.6 2303.4 2779.0 2560.6 2697.6 False True 2424.884507414975 2455.9879263691423 2544.9382833458026 2800.518561575776 2435.1434514044868 2623.757553846419 2782.611699880604 2257.456880017657 2662.208294232822 2398.9232790052693 2365.812301495327 1.0249691008379282 1.0381161366084786 1.0757143674235092 1.1837450332833632 1.029305431316482 1.1090303115712332 1.176176021285305 0.9541994851370148 1.1252829704833962 1.0139956062824655 1.0 11.208119902530994 -11.011611478820939 1.226871929178049 0.9988754675436049 1.0847446160407825 0.15256736381458624 0.06499197393942924 0.6445685512437157 1.6890018295036369 0.04750250981944872 0.010179064269763272 9.736178358028008e-12 11.011611478820939 0.08586914849717764 VLYPNDNFFEGK ddPTM_A549_MK2206_60min_R1 1 VLYPNDNFFEGK 12 0 P11216;P11217-2;P11217;E9PK47;P06737-2;P06737 P11216 PYGB;PYGM;PYGL Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 0 140.3 5.1383999999999995e-09 900450.0 3863.1 3733.7 4235.3 3413.4 4894.8 4396.8 4430.1 3792.0 6217.6 5394.2 5405.9 False True 4515.096836272914 3923.729382077889 4835.929225728805 4249.683153233349 4174.781404102349 4862.066457640371 5234.991825856774 4329.527612512954 4809.323527466956 4175.646473565399 4063.4658347500745 1.1111442841872983 0.9656115103818069 1.190099639665419 1.0458272140227625 1.0273942427177123 1.1965318905995956 1.2883070853181555 1.0654765632548364 1.1835521013462036 1.027607132280029 1.0 11.988495048925914 -4.1419687413851545 12.813283148988809 1.0993293461706104 1.091643332319417 0.0 0.09662826365933812 0.0 0.0 0.01331654135472206 0.0 7.21159383209102e-05 4.1419687413851545 -0.007686013851193385 VMATTS(ph)ASLKR ddPTM_A549_MK2206_60min_R1 1 VMATTSASLKR 11 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 VMAT(0.001)T(0.011)S(0.541)AS(0.447)LKR 41.577 0.036614 5422100.0 2303.4 2353.4 2344.2 2406.5 3640.0 2677.5 2538.1 2276.4 3855.3 3886.1 3428.3 True False 2692.1576072768075 2473.178007815868 2676.6428094712237 2996.0926080318914 3104.5608218788416 2960.831272819344 2999.239916301456 2599.0866711826184 2982.08070564902 3008.227310986334 2576.9584937334557 1.0447035192159626 0.9597275291123405 1.0386829341567496 1.162646823888576 1.2047383880758609 1.148963508733018 1.1638681506104531 1.0085869359180495 1.157209443962999 1.1673557483760877 1.0 11.331453585007797 -6.008607021950917 22.622837782892905 1.0969598014609119 1.0014628926719145 0.2889122038584788 0.06909827585464212 142.90469233298836 375628.87785502087 0.011171544814636052 0.03241030072712753 9.803766931189419e-07 6.008607021950917 -0.09549690878899741 VMDS(ph)DEDDDY ddPTM_A549_MK2206_60min_R1 8 VMDSDEDDDY 10 0 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 VMDS(1)DEDDDY;VMDS(0.999)DEDDDY(0.001);VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY 171.56 1.6946e-10 91559800.0 5926.13 7193.280000000001 5519.23 5600.78 7715.490000000001 5863.03 5401.5599999999995 6279.28 9649.339999999998 8728.25 8410.010000000002 True False 6926.315864031994 7559.387227016965 6301.939806039522 6972.971351428564 6580.551641647804 6483.451943035664 6382.953533074856 7169.38716948849 7463.779896829637 6756.532262967104 6321.572412531955 1.0956634539693304 1.195808057506571 0.9968943476066947 1.103043815112403 1.0409675334260897 1.0256074786366123 1.009709786827913 1.1341145369585293 1.1806840782260688 1.0688056423387446 1.0 12.626067740154124 -11.189518572271288 1.6257527680435824 1.0001780070647848 1.0986946309412449 0.03008958124069827 0.06642002875394315 0.4927761111424975 2.348650298592258 0.05098206545328887 0.010781706020115963 6.4637035187485995e-12 11.189518572271288 0.0985166238764601 VMDS(ph)DEDDDY ddPTM_A549_PD325901_60min_R1 9 VMDSDEDDDY 10 0 O14737;K7EQA1 O14737 PDCD5 Programmed cell death protein 5 1 VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY 171.56 1.6946e-10 180694000.0 13317.729999999998 13103.7 12296.02 12567.989999999998 14022.949999999997 13406.05 12396.039999999999 13642.61 14131.199999999999 14365.12 13934.34 True False 14669.736145605344 14207.994786439145 13130.501859174914 13344.28619832376 13038.026368551235 13296.875573561705 12867.778085573362 13370.497441129493 13537.314806571727 13458.10387163329 12220.504517059015 1.2004198456068131 1.162635696963716 1.0744647932371043 1.0919586977522917 1.0668975532353033 1.0880791013988127 1.0529661903574272 1.0941035554191043 1.1077541674056528 1.101272361779063 1.0 13.577016226836545 -14.748354132003245 0.015914211755379624 5.876162054259716e-17 1.9402104908158326 0.31890154809917204 0.04160013001692014 2056.383624602092 2.6494556662066344 201.82891860200016 128.83937547071898 1.785031432576073e-15 14.748354132003245 1.9402104908158326 VMEHFIK ddPTM_A549_MK2206_60min_R1 2 VMEHFIK 7 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 58.577 0.03483 2805200.0 1078.3999999999999 1441.6599999999999 1314.98 1345.62 1688.1399999999999 1273.76 1168.58 1022.6700000000001 2070.57 1823.7 1612.63 False True 1260.4075556513444 1515.0343361722707 1501.4639372060703 1675.2969604071775 1439.8168422655347 1408.5484377465418 1380.8958596554723 1167.636604295524 1601.5892010208515 1411.724903385342 1212.16946467619 1.0397948408872355 1.2498535727238318 1.2386584392365965 1.3820649745988314 1.1878016104374949 1.162006203582113 1.1391937347839023 0.9632618526712663 1.3212584937112635 1.1646266834171242 1.0 10.243375690368369 -7.177666770227714 3.5301552567536456 1.1388120234881618 1.2344198046587043 0.13988918102249226 0.11490370759116247 0.4998433538246098 11.955505496155537 0.021098429075937328 0.037546124748954995 6.642525491941152e-08 7.177666770227714 0.09560778117054247 VMEHFIK ddPTM_A549_PD325901_60min_R1 2 VMEHFIK 7 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 71.029 0.02238 5838600.0 1888.3 1876.75 2017.42 1570.49 2346.3 2205.5 2192.8 2073.72 2126.6000000000004 2291.5 2363.3999999999996 False True 2079.998825907012 2034.9103089546973 2154.334252931977 1667.4956004584246 2181.5039822955787 2187.539139231195 2276.2482039462016 2032.3580277981305 2037.2263974507089 2146.8142989301627 2072.716782826979 1.0035132841787004 0.9817599422238877 1.0393770488960292 0.8044975629444786 1.0524853179990297 1.0553970312565375 1.0981954808324685 0.9805285722761393 0.9828773589955379 1.0357489825513557 1.0 11.017307283924112 VMEKGS(ph)LK ddPTM_A549_MK2206_60min_R1 2 VMEKGSLK 8 1 P18031;B4DSN5 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type 1 VMEKGS(1)LK;VMEKGS(1)LK 55.426 0.0058255 16944300.0 7350.6 7832.6 8784.400000000001 6764.200000000001 10274.400000000001 7499.6 7393.0 7931.299999999999 10999.3 10516.3 9982.8 True False 8591.201575084177 8231.245884260463 10030.160010032854 8421.429303656476 8763.04937041538 8293.202694168418 8736.212403457967 9055.586063587549 8507.976112272789 8140.660526112445 7503.795248736208 1.144914178799203 1.0969443610080876 1.3366782644718533 1.1222893248686145 1.1678156292832291 1.1052010908166987 1.1642391768257967 1.2068007939199425 1.1338230628968329 1.0848724220564918 1.0 12.873404747155174 -10.280527108815143 0.5376728118956688 0.9853880540645301 1.1715389870186612 0.30488317652472485 0.06676293269989178 0.6601221097335727 0.3278440578282287 0.05872034160677579 0.014868427909789855 5.2417088105551636e-11 10.280527108815143 0.1861509329541311 VMIGS(ph)PK ddPTM_A549_MK2206_60min_R1 8 VMIGSPK 7 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK 80.438 0.009254 294923000.0 38668.899999999994 44774.6 42707.00000000001 43899.49999999999 59657.700000000004 46014.200000000004 38986.4 38206.200000000004 67771.7 67348.0 87086.1 True False 45195.26495616309 47053.43589222076 48763.49478034622 54654.87947072345 50882.131358077335 50883.39210224605 46069.72423186443 43622.045851580326 52421.51815916632 52134.040024782626 65460.21791591205 0.6904233807198653 0.7188096433266383 0.7449332790640284 0.834932745578868 0.777298533033281 0.7773177927334295 0.7037820175154934 0.666390171624783 0.8008149045043694 0.7964232580428043 1.0 15.998330784646491 -10.103777118050644 0.7090086669030425 0.9951559202766047 0.7433989165040519 0.27038730067266425 0.07438408873056124 0.2372317870444915 0.2331834999014231 0.030133308077110486 0.011380908338018022 7.87449808920754e-11 10.103777118050644 -0.25175700377255283 VMIGS(ph)PK ddPTM_A549_PD325901_60min_R1 5 VMIGSPK 7 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK 83.78299999999999 0.014353 322183700.0 28633.0 29232.300000000003 31389.600000000002 31204.9 35074.4 35360.9 33239.8 33464.2 36976.2 35585.3 42432.2 True False 31539.80108149946 31695.80851176578 33519.88701699875 33132.35580153018 32610.895144111168 35072.93255426901 34504.75877851648 32796.73027884294 35422.218902199194 33338.4380849747 37213.30839987769 0.8475409050597372 0.8517331533970774 0.9007499859138812 0.8903362056795541 0.8763234591692027 0.9424835915525395 0.9272155651344852 0.8813172407683787 0.9518696516194625 0.8958740708225844 1.0 15.183531036606023 -2.0000000046089794 0.04999195727235439 1.2086703045642124 0.34811248848170356 0.22035709841654028 0.03853293254256806 105.2695513166061 0.38636052778180857 1.5461035174768947 6.938822732442503 0.009999999893874328 2.0000000046089794 -0.8605578160825089 VMIYQDEVKLPAKLS(ph)ISK ddPTM_A549_MK2206_60min_R1 2 VMIYQDEVKLPAKLSISK 18 2 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 VMIYQDEVKLPAKLS(0.986)IS(0.014)K;VMIYQDEVKLPAKLS(0.972)IS(0.028)K 72.015 0.00033089 14371800.0 2738.4 3137.5 3369.3999999999996 2640.1 3748.3 2742.5 2617.1000000000004 2000.73 4564.8 3918.0 5468.3 True False 3200.574972547889 3297.1853486539844 3847.231585288089 3286.924618518594 3196.930035342986 3032.7095296758353 3092.5931937088912 2284.3396044786514 3530.880088487706 3032.921078830824 4110.370192597688 0.7786585690777348 0.8021626262743541 0.9359817741517583 0.7996663231058782 0.7777718029145635 0.7378190740915264 0.7523879964092532 0.5557503332893199 0.8590175393073892 0.7378705412696822 1.0 12.005052617978757 -9.580891630497186 1.3510235358676914 0.9670719914950657 0.7758680223149073 0.0 0.11170044536174939 0.25445715515941464 0.9481040252937859 0.0237164123776078 0.017897558581296453 2.624873446347641e-10 9.580891630497186 -0.19120396918015847 VMIYQDEVKLPAKLS(ph)ISK ddPTM_A549_PD325901_60min_R1 2 VMIYQDEVKLPAKLSISK 18 2 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 VMIYQDEVKLPAKLS(0.98)IS(0.02)K;VMIYQDEVKLPAKLS(0.904)IS(0.096)K 104.63 2.2091999999999998e-09 19829700.0 3549.4 3582.2 4344.4 4373.6 5391.2 6481.7 6179.4 6408.2 5881.4 5371.6 5187.1 True False 3909.732475069823 3884.0845657319937 4639.237108999455 4643.747338833721 5012.540710630322 6428.915184200783 6414.560448497426 6280.383423864354 5634.2252111194375 5032.436259277008 4549.119583736068 0.8594481642223321 0.8538101701301289 1.0198098826827005 1.0208013338308284 1.1018705088674892 1.4132218478461913 1.410066350295703 1.3805711870749384 1.2385309085438905 1.106244003184459 1.0 12.151371644241182 -6.272959867042541 1.4070976940215036 1.1799465145186085 0.8594295711141934 0.520529519790365 0.13609981913136743 0.4063758138025322 1.4771228178349043 0.026020819810707176 0.10624121510785353 5.333841830023731e-07 6.272959867042541 -0.32051694340441517 VMLADS(ph)PREESNKR ddPTM_A549_PD325901_60min_R1 1 VMLADSPREESNKR 14 2 H7BZE0;H7C476;Q8IUH3-3;Q8IUH3 H7BZE0 RBM45 RNA-binding protein 45 1 VMLADS(0.999)PREES(0.001)NKR 56.407 0.0054402 17042000.0 2235.1 2090.3 2030.0 1703.2 2026.0 2044.6 1849.6 1892.3 1906.8 2425.7 2437.5 True False 2462.005706606345 2266.4569169084884 2167.7680073816623 1808.4027957521469 1883.7007493205638 2027.9494554849696 1919.9875401399556 1854.5565920193687 1826.663827075617 2272.540888027447 2137.7029525855814 1.1517061823900814 1.060230054024661 1.0140641873370277 0.8459560733472621 0.8811798416810912 0.9486582095197729 0.8981545063675493 0.8675464426786972 0.8544984348111798 1.0630760860758401 1.0 11.06184568000061 -5.793635439270095 2.04166796547144 0.9164056948735692 1.1338639540592688 0.5608399766133216 0.06466474470280703 0.1834124866536794 1.4239888283695132 0.008877090599343815 0.04981876668281166 1.6082907374079767e-06 5.793635439270095 0.2174582591856996 VMLGET(ph)NPADSKPGTIR ddPTM_A549_MK2206_60min_R1 4 VMLGETNPADSKPGTIR 17 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;O60361 Q32Q12 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase 1 VMLGET(1)NPADSKPGTIR;VMLGET(1)NPADSKPGTIR;VMLGET(0.996)NPADS(0.002)KPGT(0.002)IR;VMLGET(0.976)NPADS(0.011)KPGT(0.013)IR 163.85 3.7455e-23 96963000.0 18773.0 22114.800000000003 22613.800000000003 21984.6 29830.3 23243.0 21082.0 23257.8 32199.7 31995.699999999997 33789.4 True False 21941.423444216165 23240.348860052003 25820.776881162164 27370.827986926182 25442.30238595945 25702.558832545274 24912.326510171897 26554.664374025273 24906.519362354884 24767.849148021265 25398.559440001532 0.8638845638489031 0.9150262602472465 1.0166236767151313 1.077652772063065 1.001722260904649 1.0119691588517794 0.9808558855088513 1.0455185238656854 0.9806272446746839 0.9751674777669899 1.0 14.632459051834168 -5.613372167025448 3.7417960909989345 1.0028085185114348 0.8730242129298919 0.7154107693351998 0.029690065211066933 0.08987276565020637 2.3347249515155415 0.004202403283475957 0.019945933883955227 2.4357226403980993e-06 5.613372167025448 -0.12978430558154297 VMLGET(ph)NPADSKPGTIR ddPTM_A549_PD325901_60min_R1 4 VMLGETNPADSKPGTIR 17 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;O60361 Q32Q12 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase 1 VMLGET(1)NPADSKPGTIR;VMLGET(0.999)NPADSKPGTIR;VMLGET(0.998)NPADS(0.002)KPGTIR;VMLGET(1)NPADSKPGTIR 123.36 1.4244e-10 125123000.0 21463.7 21470.7 23085.7 23691.9 26761.7 27105.1 24905.1 25319.5 28299.1 26590.0 28450.9 True False 23642.67902325919 23280.11124042821 24652.434427591543 25155.294854791173 24882.050514853 26884.365052267272 25852.877209093655 24814.482709736498 27109.78723977113 24911.102862122203 24951.61966511472 0.9475408546850534 0.9330100231119075 0.9880093861024392 1.008162804355391 0.997211838301664 1.0774597165672077 1.0361202020580251 0.994503885630721 1.0864940875030162 0.9983761854526356 1.0 14.606845846694656 -6.181751961947757 1.0290839683495163 1.039195060482991 0.9319470879533155 0.513939967473268 0.031086447152531626 0.41472052497807677 0.7083400746173487 0.005555227705179699 0.033940930880765906 6.58033551915788e-07 6.181751961947757 -0.10724797252967544 VMLGETNPADSKPGTIR ddPTM_A549_MK2206_60min_R1 1 VMLGETNPADSKPGTIR 17 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;O60361 Q32Q12 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase 0 59.728 0.0040884 10004000.0 2388.2 2594.7 2430.6 2829.3 3446.8 2573.6 2578.8 2504.5 4185.9 4024.3 4205.3 False True 2791.269774115858 2726.7591471402357 2775.2956286582858 3522.4786270121035 2939.7802859483513 2845.9366437825806 3047.334579472121 2859.520544709571 3237.8003335087355 3115.207835002268 3161.007949624392 0.8830315578445577 0.8626233121192384 0.8779780604436827 1.1143529795395368 0.9300135693419157 0.9003256838125795 0.9640388850759523 0.90462301591154 1.02429363832934 0.9855109144450059 1.0 11.62616894814533 -2.0000000000542775 0.22248569401195858 1.0136960708060738 0.20332894964175494 0.19580082147320654 0.06552142526477096 42.545363246258965 0.4962280170065378 0.0406391255688253 12.603619617116163 0.009999999998750215 2.0000000000542775 -0.8103671211643189 VMLGETNPADSKPGTIR ddPTM_A549_PD325901_60min_R1 4 VMLGETNPADSKPGTIR 17 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;O60361 Q32Q12 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase 0 ;;; 116.13 1.4745999999999999e-09 48987300.0 20960.0 21108.4 22372.8 23640.199999999997 28376.4 26831.0 24867.600000000002 26317.9 27070.300000000003 24883.9 26649.199999999997 False True 23087.843770063515 22887.278947936244 23891.152746575586 25100.401463210386 26383.33955726559 26612.497231789686 25813.950126072876 25792.96883850685 25932.629430504032 23312.726307287066 23371.517343197396 0.9878624237798387 0.9792808319566767 1.0222337042027543 1.0739739784381697 1.1288672091692338 1.1386722069004058 1.104504673231513 1.1036069442882899 1.109582619292456 0.9974845006831599 1.0 14.512463780441461 -6.05161803656184 2.954809250750145 1.0731088273638505 0.9842597135304268 0.42734384642965817 0.04453864999762122 0.24990978047506035 4.292153001545569 0.007733107163810396 0.02545918240797285 8.879366119145932e-07 6.05161803656184 -0.08884911383342364 VMLTTAGGTKGT(ph)VIK ddPTM_A549_PD325901_60min_R1 1 VMLTTAGGTKGTVIK 15 1 A0A590UK71;A0A590UJ75;A0A590UJ40;A0A1Y0BRN3;A0A5F9ZI03;A0A0D9SGC1;A0A0A0MRM8;A0A590UKB0;A0A590UK22;A0A590UK86;A0A590UJY4;E7EW20;Q9UM54-5;Q9UM54-2;Q9UM54-1;Q9UM54-4;Q9UM54-6;Q9UM54 A0A590UK71 MYO6 Unconventional myosin-VI 1 VMLTTAGGT(0.001)KGT(0.999)VIK 109.28 1.3044e-06 8752000.0 6528.7 6560.8 7107.7 7473.8 9172.6 6990.7 8053.6 8189.6 8405.2 8862.0 7900.2 True False 7191.488817825085 7113.701641129599 7590.071264072239 7935.439651768669 8528.348219752132 6933.770056959195 8360.08415509902 8026.252003383085 8051.958673870347 8302.451807601617 6928.525483493995 1.0379537226149422 1.0267266329721603 1.0954814674715798 1.1453287818127351 1.2309037817742658 1.000756953767103 1.206618085625212 1.158435806075078 1.1621460717800254 1.1982999596928325 1.0 12.758332637890868 -2.0461193853521813 20.869395381722484 1.0954334977774132 0.0035911052907111607 0.0 0.08436979089206444 0.0 0.0 0.011518327379635715 0.0 0.008992503481864509 2.0461193853521813 -1.091842392486702 VMPT(ph)PTNQFK ddPTM_A549_PD325901_60min_R1 1 VMPTPTNQFK 10 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 VMPT(0.98)PT(0.02)NQFK 64.439 0.0028578 5500800.0 3565.6 3693.6 3890.2 3857.8 4751.0 3922.7 3846.7 4367.2 4227.5 3931.4 4031.6 True False 3927.577087144014 4004.872634690327 4154.21236567298 4096.087544300514 4417.30615006022 3890.7548317670385 3993.0882734950064 4280.092769997878 4049.832876527257 3683.1707330630784 3535.7387584180615 1.1108221945959793 1.1326834102647794 1.1749206175887361 1.1584813879555855 1.2493304658165933 1.100407891421202 1.1293504826927794 1.2105229097618204 1.1453993502447586 1.041697643609558 1.0 11.787795968368266 -10.437389329052445 0.6844146879143185 0.9937625842816905 1.1597741110867765 0.5923958580403166 0.04290885732013136 0.36430101714687 0.29520137793389695 0.03312737964629 0.008595175281209282 3.652671961704326e-11 10.437389329052445 0.16601152680508602 VMPTKS(ph)PPPPGGGNLGMNSR ddPTM_A549_MK2206_60min_R1 1 VMPTKSPPPPGGGNLGMNSR 20 1 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 VMPT(0.383)KS(0.614)PPPPGGGNLGMNS(0.002)R 42.45399999999999 0.019484 3352800.0 2117.3 2201.5 2395.1 1893.7 3009.2 2286.6 2386.8 2166.6 3554.8 3105.4 3684.9 True False 2474.6484769849712 2313.546946633226 2734.7611948487875 2357.656585011424 2566.5506662631356 2528.5664942777635 2820.450664760378 2473.7221849342236 2749.6434758491273 2403.8879832060325 2769.8376319337326 0.8934272711347783 0.8352644645881455 0.987336284018765 0.8511894552336814 0.9266069016729062 0.912893400366025 1.018272924103248 0.8930928500697786 0.9927092635857839 0.867880469053987 1.0 11.435585692535946 -7.640336380008691 0.4211380820291151 1.0036872070161924 0.8738835393377526 0.0 0.06251812893139762 0.7499857114821143 0.27306187343982413 0.015117314768645891 0.036986189250445264 2.2890939628922906e-08 7.640336380008691 -0.12980366767843976 VMPTKS(ph)PPPPGGGNLGMNSR ddPTM_A549_PD325901_60min_R1 1 VMPTKSPPPPGGGNLGMNSR 20 1 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 VMPT(0.148)KS(0.845)PPPPGGGNLGMNS(0.007)R 45.957 0.007037000000000001 6545100.0 3611.4 3794.2 4085.3 3503.3 4836.5 4566.1 4313.8 4822.5 4917.0 4110.8 4661.5 True False 3978.0266694278357 4113.950549746058 4362.553024904586 3719.6908844284258 4496.800925019204 4528.915195485628 4477.964019601935 4726.311454321934 4710.3555893280945 3851.2433864464824 4088.165051683155 0.9730592133969802 1.0063073525009187 1.0671176358470316 0.9098680795426732 1.0999558159149685 1.1078112400625826 1.0953481483724083 1.1560960466544876 1.1521931061439838 0.9420469422732508 1.0 11.997237728109322 -6.799603500373651 24.999869512818908 1.0860839670822395 0.9958913988831055 0.2813527225893815 0.06827921719894985 158.98693629414956 104145.96064788812 0.009885778622155584 0.01868262554793291 1.5863408196656125e-07 6.799603500373651 -0.09019256819913402 VMQEQGTHPK ddPTM_A549_PD325901_60min_R1 1 VMQEQGTHPK 10 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 45.077 0.057224000000000004 3777700.0 2689.1 3024.0 2709.3 2398.9 2704.4 2538.0 2106.2 2481.0 2554.7 2596.7 3206.4 False True 2962.09545238921 3278.8430927289214 2893.169390344404 2547.07460470281 2514.4522736735107 2517.331369471218 2186.3525935568637 2431.514508693153 2447.3348432085586 2432.743918844406 2812.03312704427 1.053364351899606 1.1660044333031439 1.0288532387900482 0.9057768844210033 0.8941759076346492 0.8951997560986015 0.7774988752906125 0.8646820285680346 0.8703079702979724 0.8651192247516177 1.0 11.457397874784121 -6.08276880186441 3.4013189716538337 0.9127461109726093 1.1092822881658349 0.6761688258739109 0.0602270400685245 0.13902282204003577 3.057478815304565 0.010378767941787237 0.03168966784920649 8.264778107424892e-07 6.08276880186441 0.19653617719322558 VMS(ph)PENFPTASVEGK ddPTM_A549_MK2206_60min_R1 4 VMSPENFPTASVEGK 15 0 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1;H3BRU9;H3BSP3 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 VMS(0.988)PENFPT(0.012)ASVEGK;VMS(0.967)PENFPT(0.029)AS(0.004)VEGK;VMS(1)PENFPTASVEGK;VMS(0.995)PENFPT(0.005)ASVEGK 92.45700000000001 1.4877e-05 5328800.0 3712.5 4505.9 4673.1 4228.6 5808.3 4641.400000000001 3996.6000000000004 4227.0 6407.1 6050.299999999999 6347.3 True False 4339.079238089408 4735.231063745013 5335.815848878074 5264.607189829069 4953.906764208486 5132.549867288032 4722.730487171661 4826.190194644582 4955.9020800362705 4683.5330278841575 4771.090233431836 0.909452352773533 0.9924840722073223 1.1183640610041516 1.1034390322235108 1.0383175588454863 1.075760385188984 0.9898640051027937 1.0115487149722409 1.0387357684642866 0.9816483861625273 1.0 12.22010325626907 -11.062444656333065 0.4940531805368585 0.9880275504776196 1.036126868225795 0.06354253739402549 0.055451815195802924 6.051035147230894 1.6021962598384714 0.14741614762857438 0.013663483882021382 8.660746832584346e-12 11.062444656333065 0.04809931774817533 VMS(ph)PENFPTASVEGK ddPTM_A549_PD325901_60min_R1 2 VMSPENFPTASVEGK 15 0 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1;H3BRU9;H3BSP3 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 VMS(1)PENFPTASVEGK;VMS(1)PENFPTASVEGK 103.39 2.1791e-06 14445300.0 4006.8999999999996 4447.4 5005.4 4362.4 5101.5 4654.5 4582.0 5046.299999999999 4713.1 4552.3 5088.0 True False 4413.677538276125 4822.19800615166 5345.096543915357 4631.855540270765 4743.188239219575 4616.5952951945565 4756.370517366607 4945.647587754235 4515.024797246748 4264.867001099624 4462.208255489408 0.9891240582163372 1.0806752464364235 1.1978590504689737 1.0380186838148258 1.0629688189439626 1.0345987974710105 1.0659230239904918 1.108340826914589 1.0118364134377558 0.9557749788690354 1.0 12.12354213176063 -8.853336593451179 7.357182976497719 1.0052674956203638 1.073676399945681 0.3273879998075804 0.051602380257629706 0.21499840461511407 14.886814069189406 0.008523345184774985 0.009055143531695342 1.4017268959657356e-09 8.853336593451179 0.06840890432531732 VMS(ph)PENFPTASVEGKEEK ddPTM_A549_MK2206_60min_R1 3 VMSPENFPTASVEGKEEK 18 1 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1;H3BRU9;H3BSP3 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 VMS(0.999)PENFPT(0.001)ASVEGKEEK;VMS(0.968)PENFPT(0.032)ASVEGKEEK;VMS(1)PENFPTASVEGKEEK 126.45 9.2318e-12 14312600.0 6693.999999999999 7596.099999999999 7851.3 6676.1 9467.8 6690.8 7130.4 6511.4 10973.5 11514.8 11363.400000000001 True False 7823.783547412927 7982.709044433635 8964.732399113303 8311.74479970152 8075.099161918819 7398.816015006409 8425.901382607417 7434.410890326173 8488.019771078649 8913.598682624086 8541.554166114616 0.9159672110317848 0.9345733679360149 1.0495434700487514 0.9730951344516695 0.9453899143968107 0.8662142592689293 0.9864599835980661 0.870381519070544 0.9937324760816545 1.043557004881549 1.0 13.060282881878683 -8.954326479370255 24.99924485929849 0.9972350876655754 0.9451332488532993 0.2586188139266069 0.05074256582671221 150.71228636015974 82492.10907244618 0.008374802093936247 0.008912316368709067 1.1108963008658691e-09 8.954326479370255 -0.05210183881227615 VMS(ph)PENFPTASVEGKEEK ddPTM_A549_PD325901_60min_R1 4 VMSPENFPTASVEGKEEK 18 1 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1;H3BRU9;H3BSP3 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 VMS(1)PENFPTASVEGKEEK;VMS(1)PENFPTASVEGKEEK;VMS(0.999)PENFPT(0.001)ASVEGKEEK;VMS(1)PENFPTASVEGKEEK 140.17 1.421e-14 36206000.0 13007.5 13699.9 13827.4 13654.6 16189.300000000001 18683.6 16092.2 17903.3 16851.0 16874.8 18519.7 True False 14328.0118243846 14854.438652803225 14765.810514910938 14498.013630153404 15052.219418053019 18531.446956127835 16704.597476989726 17546.204636632854 16142.81107093101 15809.32224812862 16241.894306050952 0.8821638384290352 0.9145755028875648 0.9091187417350638 0.8926307090147815 0.9267527010347114 1.1409658631520527 1.0284882515684388 1.080305308359012 0.9938995271578003 0.9733668961408537 1.0 13.987432284644512 -7.022701579263171 24.921519547278418 1.0163196409356567 0.9024089868329555 0.6612932724338567 0.04581720357267566 395.5995222334561 434284.09040600987 0.006885872136688725 0.011984187054832894 9.490703827022063e-08 7.022701579263171 -0.11391065410270129 VMSS(ph)PSAMK ddPTM_A549_PD325901_60min_R1 1 VMSSPSAMK 9 0 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 VMS(0.247)S(0.75)PS(0.003)AMK 47.228 0.0098598 9532800.0 1906.0 1659.6 2075.7 1691.4 1893.2 2222.2 2002.3 2011.7 2401.8 2179.8 2220.9 True False 2099.495716876959 1799.4603163667057 2216.5694841980885 1795.8739365518916 1760.2281631854364 2204.103139968062 2078.4986222006023 1971.575065351879 2300.8606984844855 2042.167055993006 1947.743379445052 1.0779118743430893 0.9238693019608185 1.1380192624911554 0.9220280019966333 0.903726939473391 1.1316188586383755 1.0671316581719328 1.0122355368568199 1.1812956074018557 1.0484784995520597 1.0 10.927587895557682 -7.2786394176080815 24.89499703237196 1.082825963486787 0.993365697931544 0.19310164997576973 0.08055086883806023 1009.2563590271061 1460775.6893374617 0.01348377828083753 0.021586346732138082 5.264541849648171e-08 7.2786394176080815 -0.089460265555243 VMTIPYQPMPAS(ph)SPVICAGGQDR ddPTM_A549_MK2206_60min_R1 2 VMTIPYQPMPASSPVICAGGQDR 23 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 VMT(0.001)IPY(0.034)QPMPAS(0.518)S(0.447)PVICAGGQDR;VMTIPY(0.001)QPMPAS(0.554)S(0.445)PVICAGGQDR 75.226 2.6787e-05 6762600.0 3174.3 3859.1000000000004 3031.8 2771.2 4867.8 2907.9 3225.0 3004.3 4311.6 4220.4 4496.8 True False 3710.0442358160867 4055.5117064511837 3461.7548288349344 3450.1441244038956 4151.753068335669 3215.6120478922016 3810.9407549238394 3430.1687252828783 3335.0294842103917 3267.0087088049013 3380.1204546336676 1.0976071076787042 1.1998127761664974 1.0241513210244793 1.0207163237849217 1.228285537174926 0.9513306081989036 1.1274570850573027 1.0148066529938604 0.9866599516116467 0.9665361790069623 1.0 11.722858944248301 -8.026667784659224 0.8553797317368335 0.9919841307369094 1.1050816350288757 0.2895713443000426 0.07541472581836102 0.5001303165129196 0.7327289143130101 0.014239876050883334 0.021745868917491466 9.404424307676802e-09 8.026667784659224 0.1130975042919663 VMTIPYQPMPAS(ph)SPVICAGGQDR ddPTM_A549_PD325901_60min_R1 3 VMTIPYQPMPASSPVICAGGQDR 23 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 VMT(0.003)IPY(0.029)QPMPAS(0.52)S(0.448)PVICAGGQDR;VMTIPYQPMPAS(0.554)S(0.446)PVICAGGQDR;VMTIPYQPMPAS(0.531)S(0.469)PVICAGGQDR 74.748 2.7882e-05 17040100.0 6705.9 6624.5 6453.0 6733.099999999999 7214.5 6912.5 6736.0 8202.0 7039.1 7107.9 7378.9 True False 7386.67803137734 7182.769863684776 6890.939385041319 7148.9882950204255 6707.778408673845 6856.206891832068 6992.34216608063 8038.404675655479 6743.271106129631 6659.105980958193 6471.342078701022 1.141444532145649 1.1099351226270762 1.0648393024564886 1.1047149429095589 1.036535903541709 1.0594721787923627 1.0805088157979414 1.242154189640522 1.042020499630765 1.0290146773225224 1.0 12.65984922555053 -8.98268384412095 23.4471614140157 1.0185382387455744 1.1018436034259846 0.3329216638864292 0.05193296225722321 45.034829807874644 60981.70027993631 0.009409141100206448 0.009536776940247554 1.0406774781775335e-09 8.98268384412095 0.08330536468041028 VMTIPYQPMPASS(ph)PVICAGGQDR ddPTM_A549_PD325901_60min_R1 2 VMTIPYQPMPASSPVICAGGQDR 23 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 VMTIPYQPMPAS(0.203)S(0.797)PVICAGGQDR;VMTIPY(0.008)QPMPAS(0.44)S(0.551)PVICAGGQDR 62.848 0.00019789 2202900.0 2045.9 2209.9 2248.2 1936.2 3068.4 2558.5 2409.0 2496.1 2247.1 2471.6 2256.3 True False 2253.598261888024 2396.136028644726 2400.7763715248548 2055.7946765707547 2852.8861694053394 2537.6644242679704 2500.67581325538 2446.3133273474327 2152.6622015007442 2315.542754194105 1978.7894038641423 1.1388772637892846 1.2109100766183594 1.2132551179204136 1.038915345188446 1.4417330938978536 1.282432794168226 1.263740248645009 1.2362676506000683 1.0878682679910587 1.1701815007056118 1.0 10.950402363865164 -8.943249966424736 2.0282199198453537 1.0322404518475277 1.2320261080195252 0.23869467736943162 0.10284613813710893 0.19782287620223524 1.6164152021040317 0.018446827608299896 0.018735674209747973 1.1395936840075216e-09 8.943249966424736 0.1997856561719975 VNASAS(ph)SLKK ddPTM_A549_PD325901_60min_R1 1 VNASASSLKK 10 1 Q16658 Q16658 FSCN1 Fascin 1 VNASAS(0.661)S(0.338)LKK 98.337 0.0002077 19980000.0 6027.1 6678.5 6913.9 6483.1 7487.3 7435.7 6964.9 6749.6 6860.4 7563.3 7668.5 True False 6638.966755083484 7241.320633197792 7383.118830658168 6883.546362811619 6961.417877782756 7375.146124498482 7229.9530808395175 6614.973933041231 6572.081245683639 7085.751947239148 6725.323114626682 0.987159522587787 1.0767245691807557 1.0978087899748443 1.0235264901757393 1.0351053412798263 1.0966233144186814 1.0750343080342613 0.9835919881164585 0.9772141997743183 1.0535927904829705 1.0 12.715387867524102 -8.267647372227259 24.848978976494255 0.9885157876321129 1.0579129046554088 0.28798880149852946 0.03688400016835682 268.08335229364104 1073065.3779809512 0.005053982162062615 0.006187847619618448 5.399488589971446e-09 8.267647372227259 0.06939711702329587 VNASASS(ph)LKK ddPTM_A549_MK2206_60min_R1 1 VNASASSLKK 10 1 Q16658 Q16658 FSCN1 Fascin 1 VNAS(0.013)AS(0.464)S(0.523)LKK 51.726000000000006 0.010289 21040000.0 3112.9 3213.8 3639.6 3321.7 4181.8 3295.6 3356.4 2671.2 4081.9 4403.5 4474.6 True False 3638.281416901961 3377.3686927503354 4155.7500082550405 4135.516649116779 3566.6627595969608 3644.338204557772 3966.2144340546906 3049.8507802069107 3157.3561674548623 3408.746291636427 3363.433327322499 1.0817165267843316 1.0041431965707879 1.235567827224711 1.2295521411179293 1.0604232082210605 1.0835173020833717 1.1792160117566661 0.9067671285266061 0.9387301189550599 1.0134722350360963 1.0 11.715718944854679 -8.260587106061024 24.998685737884475 0.9654360876015657 1.1244466286858514 0.5376647792573359 0.07143029780319127 46.913549299774814 1376066.3096149818 0.011883858636944314 0.014892990642613423 5.4879847254239124e-09 8.260587106061024 0.1590105410842857 VNASASS(ph)LKK ddPTM_A549_PD325901_60min_R1 1 VNASASSLKK 10 1 Q16658 Q16658 FSCN1 Fascin 1 VNAS(0.001)AS(0.031)S(0.968)LKK 86.46700000000001 0.00031830000000000004 19909000.0 4574.0 4564.4 5097.4 4863.2 5501.5 5615.6 5229.7 5241.5 5647.8 5597.5 5095.8 True False 5038.349112799166 4949.058006763193 5443.340217156297 5163.588818871443 5115.093619144661 5569.868415446249 5428.719095301644 5136.9541706227965 5410.442606753552 5244.0728947246735 4469.048904937686 1.1273873300496848 1.1074074399354106 1.218008648583405 1.1554111240909417 1.1445597772477236 1.246320757262761 1.2147370079803008 1.149451321722429 1.2106474379315375 1.1734203420621987 1.0 12.125752116936972 -10.787630660766101 0.9260229882330301 0.9949128258156695 1.1771258380356235 0.0 0.06495751059727428 0.2688869210999931 0.3904448721139594 0.034045690346140134 0.007650516009118288 1.6306822323872844e-11 10.787630660766101 0.182213012219954 VNDAEPGS(ph)PEAPQGK ddPTM_A549_MK2206_60min_R1 2 VNDAEPGSPEAPQGK 15 0 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK 260.24 1.7519e-77 362850000.0 6703.7 6165.9 5822.299999999999 5082.4 7421.5 5098.7 5588.7 5107.9 7397.9 7513.0 7717.6 True False 7835.120670270697 6479.717973311745 6647.989689268965 6327.588228157603 6329.807181201603 5638.24104975686 6604.094448695459 5831.960467287695 5722.2874620187495 5815.808081994889 5801.106925075789 1.3506251085293233 1.1169795794148527 1.145986408306396 1.0907553178870144 1.0911378229972735 0.971925034752432 1.1384197074783584 1.0053185612005424 0.986413030465559 1.002534198577784 1.0 12.502112495755414 -2.000000000000002 0.35945780019423385 0.9954733458551457 4.921286503740432 0.7640353755737523 0.05094556158811109 16.75657116638461 0.20436053111148292 0.011945307463722141 45.65917934249026 0.009999999999999948 2.000000000000002 3.925813157885286 VNDAEPGS(ph)PEAPQGK ddPTM_A549_PD325901_60min_R1 2 VNDAEPGSPEAPQGK 15 0 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK 321.05 2.0057999999999992e-163 491350000.0 17499.3 17213.2 17654.7 16992.5 19923.3 18835.7 19797.1 18537.8 19987.4 19837.9 20446.0 True False 19275.816053696206 18663.81677373065 18852.854108335494 18042.088132232482 18523.956139653703 18682.308304156435 20550.4894738888 18168.049036377222 19147.3990860558 18585.33160844282 17931.271617872728 1.0749832172796558 1.0408529395722146 1.05139526688917 1.0061800700319157 1.0330531227461985 1.0418841843617561 1.146069833296452 1.0132047198631742 1.0678215964879432 1.036475940162446 1.0 14.13019018185208 -10.864723269842129 1.0338740565495235 0.9990372470857088 1.052862977185442 0.08786101589170947 0.03691639630564943 0.6561529958630562 1.2074824663291746 0.026483259442147352 0.005963696917854183 1.3654529188617116e-11 10.864723269842129 0.05382573009973324 VNDS(ph)WKER ddPTM_A549_MK2206_60min_R1 1 VNDSWKER 8 1 P49454 P49454 CENPF Centromere protein F 1 VNDS(1)WKER 51.841 0.0079107 5290800.0 2139.6 2111.4 1478.6 1426.9 2779.4 2517.2 1932.0 2073.3 3001.9 3121.5 3315.2 True False 2500.7121718023163 2218.8612414814397 1688.28771354157 1776.490564055976 2370.5539418489166 2783.568433217873 2283.019391786933 2367.196624214957 2321.9744430492556 2416.3509820240974 2491.9443451346588 1.0035184680929075 0.8904136425894126 0.6774981619624971 0.7128933547510583 0.9512868722278055 1.1170267259991538 0.9161598637804104 0.9499396039228313 0.9317922559477473 0.9696649071404215 1.0 11.283056132359937 -6.895490100384038 8.104404858256922 0.973054608458138 0.8162614898511237 0.3879445370879916 0.09413710095898455 0.20291878984531841 14.275858496688688 0.013921279845248312 0.02638500902521052 1.2720667461454256e-07 6.895490100384038 -0.15679311860701428 VNDS(ph)WKER ddPTM_A549_PD325901_60min_R1 2 VNDSWKER 8 1 P49454 P49454 CENPF Centromere protein F 1 VNDS(1)WKER;VNDS(1)WKER 83.182 0.00094741 21545000.0 8480.2 6975.1 7289.799999999999 7970.5 8377.8 8483.0 7027.5 6710.799999999999 9700.0 9864.2 10633.7 True False 9341.103661206715 7562.9161561155815 7784.529665128495 8462.819682681125 7789.372229840983 8413.917260529683 7294.9353580955585 6576.947829479243 9292.342732658639 9241.372728565095 9325.822312578173 1.0016386060249005 0.810965071242578 0.8347284994513712 0.9074609615140237 0.835247763549504 0.9022171963518368 0.7822297180439024 0.7052405256111952 0.9964100131015386 0.9909445428850625 1.0 13.187015226541865 -8.870988482734582 14.661047549130032 0.9984116280510682 0.8470738244310672 0.4589817831645535 0.07170256902135107 0.4302034273563478 55.16692021032556 0.01196203964775584 0.012732691855133892 1.3458960460508864e-09 8.870988482734582 -0.15133780362000104 VNEEKDGPIS(ph)PK ddPTM_A549_MK2206_60min_R1 2 VNEEKDGPISPK 12 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 VNEEKDGPIS(1)PK;VNEEKDGPIS(1)PK 125.86 8.132899999999999e-07 96250000.0 21267.0 21717.0 19246.199999999997 18589.9 24549.0 19363.7 18760.699999999997 18572.4 25529.0 27817.0 28601.0 True False 24856.349671770375 22822.30253919318 21975.600562940464 23144.42633453233 20937.874619863665 21412.75388141621 22169.276347565778 21205.094575589574 19746.722261435905 21533.120380254462 21498.58235255683 1.1561855225683848 1.0615724406813698 1.0221883565418863 1.076555930757907 0.9739188508573227 0.9960077148468158 1.031197126583055 0.986348505582632 0.9185127622653418 1.0016065258225515 1.0 14.391953909114543 -2.0000000000000013 0.35144131876606227 0.964484467314891 3.145001759027132 0.6503077468571246 0.03497165028952824 23.99743783941429 0.2946247817063695 0.010552760613017811 35.255732871900705 0.009999999999999969 2.0000000000000013 2.180517291712241 VNEEKDGPIS(ph)PK ddPTM_A549_PD325901_60min_R1 2 VNEEKDGPISPK 12 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 VNEEKDGPIS(1)PK;VNEEKDGPIS(1)PK 127.83 2.5424000000000003e-08 240710000.0 36245.0 33611.0 34017.0 33081.0 43866.0 33941.0 34083.0 36027.0 38138.0 37205.0 39469.0 True False 39924.565717841244 36443.51692781478 36325.598180838424 35124.33823759791 40785.00348948466 33664.595749102686 35380.047215933235 35308.413222365256 36535.19248846755 34855.869950554974 34614.563214605245 1.1534037124869887 1.0528376944082838 1.0494310719920112 1.014727183464143 1.1782613935245574 0.9725558442088984 1.0221145070235929 1.0200450314354175 1.0554861623402465 1.0069712489062381 1.0 15.079091523107842 -7.299603201918931 24.998555188776074 1.0226053513259374 1.0812767474325988 0.3759800893514329 0.047871448883461835 566.9706308053613 371382.9937505616 0.007034756025375717 0.01124594214400795 5.0164535828347176e-08 7.299603201918931 0.05867139610666139 VNEHEQDGNELQT(ph)TPEFR ddPTM_A549_PD325901_60min_R1 1 VNEHEQDGNELQTTPEFR 18 0 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2 E7ENF1 C12orf43 Uncharacterized protein C12orf43 1 VNEHEQDGNELQT(0.5)T(0.5)PEFR 127.58 1.8725e-12 8509300.0 408.35 349.48 459.16 486.21 485.8 486.92 504.89 407.82 403.95 361.39 568.3 True False 449.80539138861826 378.9319061001669 490.3213587533812 516.2420874369724 451.67908391901796 482.95468495781165 524.103865236409 399.68571017139914 386.97338627396454 338.5717737247969 498.4027027505172 0.9024938847768949 0.7602926388821105 0.9837855132956989 1.0357931138575405 0.9062532795796505 0.9690049477913079 1.051567060820609 0.8019332719619453 0.7764271424259707 0.6793136791922133 1.0 8.961168081640242 -5.762966912346147 24.999907368770906 0.9164208610404618 0.831393277641935 0.06595452203281393 0.11518453674959479 75.434833484194 1234694.9550305053 0.015100171601894795 0.05093813691725393 1.7259693836496752e-06 5.762966912346147 -0.08502758339852678 VNEHEQDGNELQTT(ph)PEFR ddPTM_A549_MK2206_60min_R1 2 VNEHEQDGNELQTTPEFR 18 0 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2 E7ENF1 C12orf43 Uncharacterized protein C12orf43 1 VNEHEQDGNELQT(0.413)T(0.587)PEFR;VNEHEQDGNELQT(0.32)T(0.68)PEFR 93.73 3.4445999999999996e-06 13489000.0 751.3199999999999 691.64 848.41 672.24 904.98 809.28 733.75 1013.6100000000001 1260.02 1358.1399999999999 1185.13 True False 878.1244479895854 726.8415217667065 968.7272954455597 836.9388301780006 771.8586408197567 894.9174724434129 867.0628771861597 1157.292321550438 974.627481838476 1051.335230730805 890.8295130759647 0.9857379387414886 0.8159154036746936 1.0874440970198889 0.9395050544386616 0.8664493368148404 1.0045889357137852 0.9733207807543998 1.2991176252730985 1.0940673468183193 1.180175572653208 1.0 9.799005545007544 -8.023978056149378 24.96614672911063 1.0681667482373849 0.9494227103097425 0.3689198000755476 0.10419430445350224 834.2155297604527 868590.459227726 0.016282911062039596 0.021083727943364727 9.462849736507185e-09 8.023978056149378 -0.11874403792764243 VNEHEQDGNELQTT(ph)PEFR ddPTM_A549_PD325901_60min_R1 1 VNEHEQDGNELQTTPEFR 18 0 E7ENF1;G5EA44;F5H7W8;Q96C57;F5H3K2 E7ENF1 C12orf43 Uncharacterized protein C12orf43 1 VNEHEQDGNELQT(0.403)T(0.597)PEFR 138.35 3.1894e-13 9006700.0 530.24 552.91 531.67 430.07 563.08 537.23 376.23 293.36 450.53 397.17 561.34 True False 584.0695744579427 599.505666137814 567.7523233914329 456.6344471401633 523.531203320545 532.8549769980386 390.54763853095574 287.5087046635321 431.595790860278 372.09261841854374 492.29873862744176 1.1864129006025153 1.2177680320881414 1.153267881559803 0.9275555903581784 1.0634420977396393 1.0823813574734522 0.793314318902839 0.5840126778815715 0.8766948947779001 0.7558268775092948 1.0 8.943390232865147 -6.34437531337017 0.9045800972696387 0.9084791383401787 1.2334502907027691 0.4972614306129042 0.13530588718020228 0.5878878348677866 0.784357980540876 0.02296649223412257 0.12950212563459976 4.525063589732652e-07 6.34437531337017 0.32497115236259044 VNESTES(ph)LTDEGTDMNEGQLLGDFEIESK ddPTM_A549_PD325901_60min_R1 1 VNESTESLTDEGTDMNEGQLLGDFEIESK 29 0 Q12802-4 Q12802-4 AKAP13 A-kinase anchor protein 13 1 VNES(0.273)T(0.273)ES(0.368)LT(0.045)DEGT(0.041)DMNEGQLLGDFEIESK 46.034 0.0042734999999999995 2857500.0 697.82 263.85 609.47 633.45 580.28 489.03 728.74 689.34 502.08 472.81 774.72 True False 768.6621726920673 286.0855654816556 650.8322992408381 672.5767678306707 539.5231346573235 485.0475018173795 756.4725994818292 675.5905729232313 480.9793236302319 442.9566959097408 679.4343513547083 1.1313266265673052 0.4210643234496994 0.9579031409630067 0.9899069225593844 0.7940769164549613 0.7138989967908668 1.113385859831073 0.9943426786946923 0.7079114011106716 0.6519492207400757 1.0 9.408190350700487 VNFPENGFLS(ph)PDKLSLLEK ddPTM_A549_MK2206_60min_R1 1 VNFPENGFLSPDKLSLLEK 19 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 VNFPENGFLS(0.999)PDKLS(0.001)LLEK 236.64 1.6933999999999998e-85 152600000.0 18569.0 21068.0 20960.0 18489.0 28576.0 21750.0 21870.0 22809.0 32683.0 30123.0 32352.0 True False 21702.9932315373 22140.271211296305 23932.443173157924 23018.805830002755 24372.5082543983 24051.570563518486 25843.495910134687 26042.24559963291 25280.35268402637 23318.193378667922 24318.10553022337 0.8924623344760175 0.9104439152868887 0.9841409374350263 0.9465706858371101 1.0022371283859806 0.989039649228694 1.0627265301573559 1.0708994402243515 1.0395691659700665 0.9588819881420153 1.0 14.56974322146376 -6.002910144239499 0.729443704462796 1.0254035180727927 0.872219376853715 0.6227834621865855 0.033728571507642066 0.5598887514075672 0.36290659509091205 0.00513128406247032 0.057003438676863936 9.93321545920358e-07 6.002910144239499 -0.15318414121907775 VNFPENGFLS(ph)PDKLSLLEK ddPTM_A549_PD325901_60min_R1 2 VNFPENGFLSPDKLSLLEK 19 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 VNFPENGFLS(1)PDKLSLLEK;VNFPENGFLS(1)PDKLSLLEK 245.49 3.8625999999999996e-86 251900000.0 44940.0 46519.0 47198.0 45156.0 59026.0 55764.0 52691.0 53270.0 57956.0 51462.0 57607.0 True False 49502.275716920565 50439.31938844467 50401.1401046304 47945.18356328323 54880.217388645426 55309.87647249528 54696.18483862156 52207.4880604934 55520.31086741895 48212.68053744016 50521.70420086051 0.9798219695858442 0.9983693184202911 0.997613617787896 0.9490017077148915 1.0862701141366224 1.0947745597139458 1.082627470782942 1.0333675177094317 1.0989397872780644 0.954296401913912 1.0 15.624615684562922 -6.763262856793114 24.999917561186958 1.0554385523843808 0.9836001974570422 0.3654942906506481 0.043217886918879914 37.54002191431847 514688.03019944666 0.006004340232238312 0.011779077454291952 1.7247936444231893e-07 6.763262856793114 -0.07183835492733859 VNFSEEGET(ph)EEDDQDSSHSSVTTVK ddPTM_A549_PD325901_60min_R1 2 VNFSEEGETEEDDQDSSHSSVTTVK 25 0 Q5JTV8;J3KN66;Q5JTV8-3;A0A0A0MSK5;Q5JTV8-2;H0YD16 Q5JTV8 TOR1AIP1 Torsin-1A-interacting protein 1 1 VNFS(0.086)EEGET(0.745)EEDDQDS(0.072)S(0.072)HS(0.019)S(0.005)VTTVK;VNFS(0.096)EEGET(0.869)EEDDQDS(0.015)S(0.015)HS(0.004)S(0.001)VTTVK 51.236000000000004 0.006854600000000001 12922900.0 2541.8 2833.0 2284.0 3331.6000000000004 3521.9 3794.3 2916.7 3298.0 3718.0 3497.5 3433.6 True False 2799.841664825738 3071.7468524143633 2439.005974807744 3537.385365387419 3274.5338938954083 3763.4004787961544 3027.696614579481 3232.218802769052 3561.7453896932807 3276.667253112916 3011.288967383735 0.9297817961516638 1.0200770785153692 0.809954142968484 1.174708041540353 1.0874193507707053 1.2497639780037013 1.005448712286819 1.0733671984915036 1.1827976086890768 1.0881278046057954 1.0 11.556165442345435 -6.270604718512849 24.898359226294755 1.097829964676862 0.9299516097274579 0.49413672623653127 0.08401388576262732 459.0794220240002 1247126.099815041 0.013024316840010933 0.030665290549773704 5.36284545157028e-07 6.270604718512849 -0.16787835494940395 VNFTVDQIR ddPTM_A549_MK2206_60min_R1 2 VNFTVDQIR 9 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 128.86 0.00014079 10841300.0 3483.8 4142.9 3822.7 3616.3 5157.5 4364.6 3981.0 3599.2 6181.3 5551.7 5236.700000000001 False True 4071.7802692675814 4353.755914243372 4364.816341509105 4502.293662341876 4398.83858209894 4826.459075013003 4704.2961691013315 4109.39762208772 4781.245419507768 4297.5671141768935 3936.282864432516 1.0344226798483904 1.1060576854328892 1.1088675514020432 1.1437932225409215 1.1175107921856904 1.2261464028980096 1.195111309608472 1.0439792473298695 1.2146600191541541 1.0917831015166293 1.0 11.942618182283079 -3.19872838515466 15.113637348940722 1.1137297286650278 1.125198245399393 0.0 0.07072279321731255 0.0 0.0 0.01145760970899659 0.0 0.0006328074957608615 3.19872838515466 0.011468516734365108 VNFTVDQIR ddPTM_A549_PD325901_60min_R1 2 VNFTVDQIR 9 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 172.59 3.9856e-07 21773000.0 5886.8 5331.2 5485.7 5986.5 6951.9 6280.5 6528.8 6677.799999999999 6569.1 6135.4 6770.7 False True 6484.423602366891 5780.478933848025 5857.992590193889 6356.272508672045 6463.622526753024 6229.353690293141 6777.257056696446 6544.606040367238 6293.023571660607 5748.009796926081 5937.946823003565 1.0920312686611269 0.9734810880175769 0.9865350372455451 1.070449550684403 1.088528193232212 1.049075358196316 1.141346876068576 1.1021664954986594 1.059797899718717 0.9680130132958299 1.0 12.535748458058638 -4.917328281663989 19.692849195907307 1.0426473230164437 3.1902891374286795 0.06152110934450139 0.05378344235410683 785.3732430271281 194020.48082533374 0.0073008732535271405 2771.9245902150064 1.209683392468152e-05 4.917328281663989 2.1476418144122356 VNGDAS(ph)PAAAESGAK ddPTM_A549_MK2206_60min_R1 2 VNGDASPAAAESGAK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK 164.2 5.4247e-20 169664000.0 6034.5 6800.3 6309.7 6226.3 8692.8 6735.0 5886.3 7451.200000000001 9981.2 9037.099999999999 8606.0 True False 7052.976070639877 7146.406223570261 7204.510338247838 7751.743779509225 7414.100635282532 7447.6932296688265 6955.764516498667 8507.430418342967 7720.474136701164 6995.612833461467 6468.892686483133 1.0902910919170443 1.1047340820018248 1.1137161624742657 1.1983107705135736 1.146115880199161 1.1513088237235585 1.0752635502878045 1.3151293166633287 1.1934769226939308 1.081423540705649 1.0 12.659303064509055 -10.787042525237505 1.0945007664763649 1.0020863137654088 1.1564803919053752 0.2750308809057066 0.06708000222094566 0.36587569598396646 0.7945143464995793 0.041719746330292046 0.011088927284322894 1.632892050578241e-11 10.787042525237505 0.15439407813996642 VNGDAS(ph)PAAAESGAK ddPTM_A549_PD325901_60min_R1 2 VNGDASPAAAESGAK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK 202.53 9.439399999999999e-39 214370000.0 17291.6 16914.0 16260.300000000001 15282.300000000001 20300.0 16510.5 18081.0 17766.9 19700.7 18334.3 20612.6 True False 19047.03050259688 18339.402139688154 17363.821739127114 16226.252962378487 18874.198031198168 16376.04396203883 18769.082349302855 17412.525241636584 18872.74809002969 17176.669169048782 18077.380874037135 1.0536388338175893 1.0144944263484172 0.9605275155797132 0.8975997726353572 1.0440781307155744 0.9058858734098048 1.0382633679118387 0.9632216836590846 1.0439979232353769 0.9501746568673584 1.0 14.14189804879843 -8.758376283211758 24.9994153316899 1.020776796918284 0.9831325971709617 0.0 0.05465126629642395 134.79787729360882 1100153.4710469847 0.00831591056966939 0.009234659333352364 1.7443101856052725e-09 8.758376283211758 -0.03764419974732225 VNGDDHHEEDMDMS(ph)D ddPTM_A549_MK2206_60min_R1 17 VNGDDHHEEDMDMSD 15 0 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D 101.67 1.7003999999999998e-06 574653380.0 5383.339999999999 5232.339999999999 5699.6 5319.75 6285.97 5268.52 5075.610000000001 4337.34 8739.810000000001 8187.743999999999 10033.25 True False 6291.916181973396 5498.643756868902 6507.888984242889 6623.088988812656 5361.312139974104 5826.031289439465 5997.782637239996 4952.171227546661 6760.2569896086825 6338.126943764825 7541.71712138704 0.8342816470973939 0.729097056859329 0.8629187331605971 0.8781937696961201 0.7108874615265436 0.7725072679957488 0.7952807750149226 0.6566370957488099 0.8963816702217234 0.8404089999333129 1.0 12.880677322807303 -9.09170940850398 2.6744003460171775 0.9613128491381883 0.7823352500398862 0.3351370099560359 0.07522955062123701 0.12891660521597118 1.9096965516654212 0.013079782890906555 0.012770223668855179 8.096374558286954e-10 9.09170940850398 -0.17897759909830202 VNGDDHHEEDMDMS(ph)D ddPTM_A549_PD325901_60min_R1 14 VNGDDHHEEDMDMSD 15 0 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D 101.96 1.6666e-06 883899300.0 6995.49 6723.46 7435.129999999998 8598.6 9509.369999999999 8000.790000000001 8149.120000000001 8072.0199999999995 9540.16 8700.949999999999 9186.6 True False 7705.666994992451 7290.069570184921 7939.722632868781 9129.71599316253 8841.46465674556 7935.634218893473 8459.23922096957 7911.017228722807 9139.220252000068 8151.570532086586 8056.70643865547 0.956428914676752 0.9048448799384965 0.9854799468396404 1.1331821585752264 1.0974043455679208 0.9849724920867041 1.049962448722567 0.9819170263876492 1.1343618290658797 1.011774550078673 1.0 12.975974473823728 -6.019565379096294 6.913461350112129 1.058591770750036 0.9336006988945295 0.42685275426169356 0.0532294772178092 0.11429000619931017 25.31225210045111 0.008451395583430091 0.023904878472032782 9.559487747671462e-07 6.019565379096294 -0.12499107185550662 VNGRPLEMIEPR ddPTM_A549_MK2206_60min_R1 1 VNGRPLEMIEPR 12 1 P62249;M0R1M5;M0R3H0;Q6IPX4 P62249 RPS16 40S ribosomal protein S16 0 50.088 0.030136000000000003 2258700.0 1231.0 1380.5 1290.1 1165.3 1132.1 1227.6 1305.1 1114.9 1674.2 1876.4 2048.7 False True 1438.762704939546 1450.7615534077518 1473.0555790883127 1450.7985523123048 965.5695896838013 1357.5038171850697 1542.2197765119688 1272.9404892380524 1294.996373148027 1452.5199367836035 1539.951248756447 0.9342910732410434 0.9420827799446778 0.9565598782934496 0.942106805967958 0.6270130891893657 0.8815238912798644 1.0014731166050572 0.8266109010048122 0.8409333569447554 0.9432246234785375 1.0 10.588668963964997 -10.887952838279906 1.1266060257193065 1.0003002439739508 0.8802602954896352 0.10090567440852716 0.09645315936633597 0.7316879543877147 1.6426413330944467 0.06871585998446166 0.016327518886249327 1.2943363908209303e-11 10.887952838279906 -0.12003994848431554 VNHEPEPAGGATPGAT(ph)LPKSPSQLR ddPTM_A549_MK2206_60min_R1 1 VNHEPEPAGGATPGATLPKSPSQLR 25 1 O00499-6;O00499-11;O00499-2;O00499 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 VNHEPEPAGGATPGAT(0.506)LPKS(0.384)PS(0.109)QLR 182.91 3.7741999999999994e-57 293340000.0 3295.1 3249.7 3037.2 3232.1 4077.8 3346.8 2940.6 2832.5 4706.4 4051.0 4172.7 True False 3851.232322539642 3415.0958494090355 3467.9206300341243 4023.9646450944847 3477.961021828996 3700.9561545739616 3474.8689562570667 3234.0155491674454 3640.407914576438 3135.8762864583096 3136.5034293386198 1.2278744178997227 1.0888226097457707 1.1056645427502017 1.2829460371235748 1.1088656844103555 1.1799624129071542 1.1078798523710833 1.031089435106847 1.1606580373942312 0.9998000503125729 1.0 11.614941424701813 -14.999999999994484 0.22106271233493563 0.23259909199355777 1.1651845164552277 0.45683814697704117 0.06346677607582102 32.24962552443794 0.3973872677041569 10.766757703664224 0.04233612051771074 1.0000000000127001e-15 14.999999999994484 0.9325854244616699 VNHEPEPAGGATPGATLPKS(ph)PSQLR ddPTM_A549_MK2206_60min_R1 3 VNHEPEPAGGATPGATLPKSPSQLR 25 1 O00499-6;O00499-11;O00499-2;O00499 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 VNHEPEPAGGAT(0.001)PGAT(0.064)LPKS(0.731)PS(0.204)QLR;VNHEPEPAGGATPGAT(0.022)LPKS(0.932)PS(0.046)QLR;VNHEPEPAGGATPGATLPKS(0.986)PS(0.014)QLR 226.85 1.3914999999999996e-95 351969000.0 9204.0 9754.0 8263.0 7417.300000000001 11113.0 8110.4 7957.5 8080.799999999999 12757.3 12939.9 13416.5 True False 10757.410183804692 10250.436937297518 9434.81764979981 9234.538832975255 9478.292421302089 8968.6371447522 9403.27474645161 9226.278146412104 9867.791919221918 10016.767602849148 10084.81277343725 1.066694089962584 1.0164231272886406 0.9355471302997825 0.9156876821053572 0.9398580453835794 0.88932113527928 0.9324193673896687 0.9148685606453228 0.9784804280366065 0.9932527085909488 1.0 13.299896679827452 -8.956766482085548 7.149660327469011 0.9906343363039993 0.9485231291067445 0.12127396247842859 0.047570984543660016 0.31963004415960433 39.69004487667498 0.008864148679264206 0.00929905039637825 1.1046724369425868e-09 8.956766482085548 -0.04211120719725481 VNHEPEPAGGATPGATLPKS(ph)PSQLR ddPTM_A549_PD325901_60min_R1 4 VNHEPEPAGGATPGATLPKSPSQLR 25 1 O00499-6;O00499-11;O00499-2;O00499 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 VNHEPEPAGGATPGAT(0.024)LPKS(0.74)PS(0.236)QLR;VNHEPEPAGGATPGATLPKS(0.996)PS(0.004)QLR;VNHEPEPAGGATPGAT(0.006)LPKS(0.764)PS(0.229)QLR;VNHEPEPAGGATPGATLPKS(0.808)PS(0.192)QLR 255.89 1.3223999999999996e-124 1036588000.0 24104.0 25209.3 25146.300000000003 26746.1 28085.399999999998 27374.7 27386.7 28373.2 26899.600000000002 28083.4 31098.100000000002 True False 26551.02033557304 27333.776183046055 26852.879134985957 28398.145852199676 26112.778393370067 27151.769519252844 28428.915855077288 27807.274267655193 25769.10335787881 26310.20933125698 27273.2308470981 0.9735194368582883 1.0022199546613084 0.9845873884737469 1.0412461219357614 0.9574508623406637 0.9955465002101803 1.0423743345428456 1.0195812305315457 0.944849677045896 0.964689863066092 1.0 14.735197994763817 -8.745885363848704 24.997768799122202 0.9739567881987473 1.0024334197060563 0.21187116631159553 0.027357078055427322 330.43839885242966 531066.8057405504 0.005161000493833489 0.005842024872467249 1.795207426340091e-09 8.745885363848704 0.028476631507308947 VNIS(ph)PTISSESK ddPTM_A549_MK2206_60min_R1 1 VNISPTISSESK 12 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 VNIS(0.958)PT(0.041)ISSESK 136.6 2.8342999999999998e-08 14228000.0 4912.5 4973.3 4706.2 4453.7 6475.0 4966.7 4577.9 4379.9 6894.3 7146.8 6791.2 True False 5741.60990090619 5226.419727318201 5373.609926599037 5544.856699934187 5522.536077380632 5492.272897371365 5409.645172702587 5000.764237881194 5332.752057934804 5532.332916331831 5104.757612415088 1.1247566166397867 1.023833083593866 1.052667008817438 1.086213513144826 1.0818409994530358 1.0759125730110701 1.0597261581129716 0.9796281464410816 1.0446631285617203 1.08376015795086 1.0 12.317626744360906 -8.063279183990804 8.526346515166757 1.018572955864464 1.0715114863628408 0.28548397797913583 0.0338416658644225 0.26177651524669365 33.328614463237365 0.004560257306516452 0.005900856602315676 8.644120572499131e-09 8.063279183990804 0.05293853049837671 VNIS(ph)PTISSESK ddPTM_A549_PD325901_60min_R1 2 VNISPTISSESK 12 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 VNIS(0.965)PT(0.035)ISSESK;VNIS(0.763)PT(0.174)IS(0.048)S(0.014)ESK 184.51 3.2009e-19 47044000.0 12936.0 13581.400000000001 14457.6 12930.8 15327.1 15377.3 14577.5 16493.6 15509.0 15992.2 16510.6 True False 14249.253197020123 14725.952241927444 15438.779676611397 13729.506148022474 14250.5773716245 15252.072367127561 15132.254739614078 16164.6222090211 14857.210664000293 14982.449762754079 14479.900869316714 0.984071184300347 1.0169926144406223 1.0662213654602133 0.9481768053478635 0.9841626334488134 1.0533271259782653 1.045052371296251 1.1163489553491595 1.0260574846533037 1.0347066528958273 1.0 13.821764105186402 -7.2476656479774775 24.638354721768902 1.0265546134299244 1.0016813685783348 0.16468376753186698 0.04019658285804698 1507.7600809188443 2697070.552302326 0.006487134522648725 0.011185725443464212 5.6537207255489895e-08 7.2476656479774775 -0.024873244851589593 VNKDDIQK ddPTM_A549_PD325901_60min_R1 1 VNKDDIQK 8 1 P35579;B1AH99;Q5BKV1 P35579 MYH9 Myosin-9 0 76.064 0.0047733 4834200.0 3502.5 3380.6 3654.4 3522.5 3855.9 3843.8 3824.9 4024.0 3994.5 4081.3 3857.0 False True 3858.0712215957788 3665.4950262167317 3902.4095596923876 3740.076824822065 3585.0748861328548 3812.497367207828 3970.4586625655897 3943.738163233067 3826.6250562479304 3823.6060214809836 3382.613451537471 1.1405592973806102 1.0836281114387116 1.1536670138642824 1.1056766841396315 1.059853553323795 1.1270863259515997 1.1737843296167731 1.1658849643137772 1.131262886248101 1.1303703707980797 1.0 11.723922607105036 -10.578342262855676 0.8768418471091838 1.000182233419908 1.1258135947359222 0.0 0.04958737907030745 0.29416576293865687 0.40548241871233204 0.023235493871854404 0.006477895767419921 2.640327123488098e-11 10.578342262855676 0.12563136131601427 VNKKS(ph)PGPVR ddPTM_A549_MK2206_60min_R1 1 VNKKSPGPVR 10 2 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 VNKKS(1)PGPVR 42.208999999999996 0.02642 45094000.0 3305.9 3360.5 2933.9 3038.1 4205.4 3178.8 2854.7 2419.3 4159.6 5371.2 4957.5 True False 3863.855098504991 3531.5350961439713 3349.971136723668 3782.434636385494 3586.791230859694 3515.178506083335 3373.3620381646783 2762.243183795517 3217.457241516265 4157.8421895395895 3726.4159299605076 1.0368824015160165 0.9477028765764745 0.8989793945946263 1.0150328646822793 0.9625311018079796 0.9433135141520793 0.9052564452193154 0.7412600299357327 0.863418711703061 1.1157751221784988 1.0 11.863572996676956 -7.497202075163684 3.38603029235921 0.9143245092486594 0.9687373640050413 0.05005486544695792 0.0918094056471273 0.5138690185741737 12.201199358969184 0.012927492734856232 0.020579154135338576 3.1827162743491696e-08 7.497202075163684 0.05441285475638191 VNKKS(ph)PGPVR ddPTM_A549_PD325901_60min_R1 1 VNKKSPGPVR 10 2 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 VNKKS(1)PGPVR 42.208999999999996 0.02642 74886000.0 3344.7 3221.7 3441.6 3849.8 3603.0 4299.4 4138.7 4026.2 3567.1 3905.7 3963.5 True False 3684.2514817619976 3493.2039655571343 3675.167672022034 4087.593402469834 3349.937709675221 4264.387111861528 4296.200493283541 3945.894282507202 3417.1871919243963 3659.093435449067 3476.0146266965935 1.059906783321939 1.004945128460773 1.0572935003770982 1.1759425208041918 0.9637294630312908 1.226803558048937 1.2359558156883836 1.135177698103404 0.9830761831896825 1.052669170994387 1.0 11.763218437533112 -8.766909423364938 24.97337255942741 0.9920081891896804 1.1081311152112145 0.19774253146223542 0.08311265852095448 123.4610312555782 563656.9114775518 0.014412413006341529 0.01555723813668932 1.7103719937781747e-09 8.766909423364938 0.11612292602153418 VNLEESSGVENS(ph)PAGAR ddPTM_A549_MK2206_60min_R1 1 VNLEESSGVENSPAGAR 17 0 Q8WVM8-2;Q8WVM8-3;Q8WVM8 Q8WVM8-2 SCFD1 Sec1 family domain-containing protein 1 1 VNLEESSGVENS(1)PAGAR 135.09 2.5302e-12 6828300.0 2075.8 2443.2 1915.7 1760.9 2573.0 2495.7 1936.4 2637.5 3287.2 2705.6 2980.2 True False 2426.144291562557 2567.5484442490565 2187.3750661650133 2192.320579049806 2194.5151084324903 2759.793317488417 2288.218814832408 3011.3737020049884 2542.6544485797367 2094.403080879191 2240.1340906643068 1.0830352976071578 1.1461583728176092 0.9764482739139746 0.9786559600098216 0.9796356019838579 1.2319768396855237 1.0214651097755678 1.3442827884968138 1.1350456471227213 0.9349454077805227 1.0 11.129369376831777 VNLEESSGVENS(ph)PAGARPK ddPTM_A549_PD325901_60min_R1 4 VNLEESSGVENSPAGARPK 19 1 Q8WVM8-2;Q8WVM8-3;Q8WVM8 Q8WVM8-2 SCFD1 Sec1 family domain-containing protein 1 1 VNLEESSGVENS(1)PAGARPK;VNLEESSGVENS(1)PAGARPK;VNLEESSGVENS(1)PAGARPK;VNLEESSGVENS(1)PAGARPK 186.92 4.2311999999999997e-44 527454000.0 48867.8 48607.0 51266.9 54486.0 56792.9 53243.100000000006 51330.399999999994 53753.7 55243.1 55128.4 60721.299999999996 True False 53828.82308142703 52703.282476281325 54746.180126913765 57851.47647331583 52803.96262886868 52809.50584629353 53283.80646107267 52681.54028453811 52921.42462005511 51647.583415728404 53252.965044034805 1.0108136333238167 0.9896778974222572 1.0280400364870617 1.0863522139185775 0.9915684992414066 0.9916725914251989 1.0005791492926706 0.9892696160857112 0.9937742354119523 0.9698536667962261 1.0 15.700574234188135 VNLS(ph)PNR ddPTM_A549_MK2206_60min_R1 2 VNLSPNR 7 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 VNLS(1)PNR;VNLS(1)PNR 83.62299999999999 0.014426 93998000.0 6100.6 6343.4 5385.5 5708.5 7929.799999999999 5784.1 5259.0 5064.9 8022.6 7995.0 7648.6 True False 7130.232134650032 6666.251965147948 6149.244881156584 7107.082756264305 6763.336924542543 6396.16962282516 6214.492226401387 5782.8650856057175 6205.49390945966 6188.923947231348 5749.241529378908 1.2402039639862394 1.1595011152485195 1.069574977800748 1.236177454007935 1.176387683485127 1.1125240764612894 1.0809238391960094 1.0058483464392636 1.0793587080572768 1.0764765953222946 1.0 12.48915592524438 -7.6843436571960595 1.8309244741937631 1.0362153264446663 1.1724929252238125 0.6126509511098153 0.048631248403190504 0.17392713251431216 1.1901460078825903 0.00818435407910136 0.01293903648084992 2.0685038940170584e-08 7.6843436571960595 0.13627759877914625 VNLS(ph)PNRNQSAK ddPTM_A549_MK2206_60min_R1 1 VNLSPNRNQSAK 12 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 VNLS(0.979)PNRNQS(0.021)AK 53.169 0.0064928 16366000.0 2087.0 2429.8 2961.7 2282.2 3594.4 2220.6 2449.3 2110.3 3945.0 4064.9 4464.6 True False 2439.2345777488467 2553.4664414850827 3381.7135947491347 2841.339102451851 3065.668521472889 2455.5824180850177 2894.3061057472746 2409.441487522704 3051.463798870487 3146.6362668043416 3355.9166033084603 0.7268460054532063 0.7608849513625353 1.007687018031152 0.846665587473387 0.9135115331681879 0.7317173542584937 0.8624487577831633 0.7179682251779841 0.9092787931208345 0.9376383977188832 1.0 11.712491148983249 -9.298452455651525 1.607592681288587 0.9731961025078115 0.828371917178936 0.28991212034467073 0.08687355627603026 0.2719864657702461 1.4509994256061207 0.018933552881033038 0.01657551854599026 5.029763261235878e-10 9.298452455651525 -0.14482418532887553 VNLS(ph)PNRNQSAK ddPTM_A549_PD325901_60min_R1 2 VNLSPNRNQSAK 12 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 VNLS(1)PNRNQSAK;VNLS(1)PNRNQSAK 92.773 7.4231e-05 65475000.0 10035.2 9911.3 10573.8 10811.0 12180.1 16078.2 12853.4 12885.1 14327.1 13071.2 13176.099999999999 True False 11053.966116476216 10746.560034710377 11291.401653424744 11478.770916437563 11324.611795063876 15947.264469910227 13342.543170650364 12628.09657233459 13724.981810832323 12245.882201255052 11555.523230179637 0.9565958975883065 0.9299933737871354 0.977143261149345 0.9933579542688625 0.9800172237538594 1.3800555935243721 1.154646388992889 1.0928191065683384 1.1877421331287445 1.0597427703898685 1.0 13.496294965576993 -7.039322871687797 24.999954120001522 1.1173892017346785 0.9657362380601547 0.46295832496124834 0.09307497915805214 486.87239821539316 309533.8291631685 0.01585691869364124 0.02746793559543683 9.134339061005015e-08 7.039322871687797 -0.15165296367452374 VNLS(ph)PVIR ddPTM_A549_MK2206_60min_R1 2 VNLSPVIR 8 0 Q8IV32 Q8IV32 CCDC71 Coiled-coil domain-containing protein 71 1 VNLS(1)PVIR;VNLS(1)PVIR 54.608000000000004 0.022598 2811100.0 707.9 704.61 441.58 721.37 701.0899999999999 438.99 892.5 670.24 1162.27 1085.65 980.8299999999999 True False 827.3762135066647 740.4716393673576 504.2026839886964 898.1056823835296 597.9605897283071 485.44363042202195 1054.6556972928763 765.2485725239145 899.0177007638019 840.4009109833285 737.2628414691204 1.122226927723603 1.0043523119812239 0.6838845736263984 1.2181621422746638 0.8110548315940757 0.6584403866804053 1.4305016311296757 1.0379589604692783 1.2193991751603237 1.1398932154354722 1.0 9.526035235800256 -7.753162163364938 24.999953687078406 1.1225574120668218 0.9187190371222278 0.28603551766096735 0.19059344203422499 223.66806116120358 675549.5985330242 0.029026921844131977 0.04264654223976928 1.765378514186693e-08 7.753162163364938 -0.203838374944594 VNMQKMLPDNIS(ph)PK ddPTM_A549_PD325901_60min_R1 1 VNMQKMLPDNISPK 14 1 H0YE22 H0YE22 EIF4G2 1 VNMQKMLPDNIS(1)PK 42.277 0.019047 2909600.0 1058.8 2521.1 1292.1 3406.7 3115.4 2526.6 1741.4 1684.4 2848.8 2331.4 5072.0 True False 1166.2885965526364 2733.5619448012203 1379.7896760284962 3617.124121822943 2896.585051546537 2506.0242072915607 1807.6699299306426 1650.803320613763 2729.0748429688583 2184.195006120786 4448.176154057054 0.2621947863932722 0.6145354523129702 0.3101922289588351 0.8131701615557351 0.6511848792014778 0.5633824112396916 0.40638451970520967 0.3711191426418921 0.6135267013829359 0.4910315892343077 1.0 12.118998206615682 -10.145746980608667 0.7034576293213097 0.9942089566747958 0.5113907028291882 0.0 0.21352601661446133 0.375378580881545 0.35851819161479 0.09241225655869802 0.03332192610806753 7.149127119721955e-11 10.145746980608667 -0.4828182538456076 VNNASLIGLGYTQT(ph)LRPGVK ddPTM_A549_MK2206_60min_R1 1 VNNASLIGLGYTQTLRPGVK 20 1 Q9Y277;Q9Y277-2 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 1 VNNASLIGLGYT(0.009)QT(0.991)LRPGVK 134.76 2.0810999999999998e-17 3888300.0 2020.1 3215.8 2254.6 2070.2 2675.0 2851.7 2372.5 2341.2 4173.8 3793.5 3770.6 True False 2361.0434932968133 3379.470484207641 2574.336182166121 2577.3990929348083 2281.511043551073 3153.465001194742 2803.552539862576 2673.072269624295 3228.440964189009 2936.5457152998283 2834.255956734057 0.8330382045019917 1.1923660162654615 0.9082934715369024 0.9093741469647549 0.8049770657199508 1.1126253413006895 0.9891670274879264 0.9431301584718216 1.1390788317894815 1.0360905155099829 1.0 11.468754336085432 -8.003720000889047 1.199175018460359 1.0605464615526905 0.9535616058272964 0.09769917414345741 0.11262598625801569 0.6644738465623863 1.9067761273708332 0.020749635155025377 0.030414996125487127 9.914709617988258e-09 8.003720000889047 -0.10698485572539407 VNNASLIGLGYTQT(ph)LRPGVK ddPTM_A549_PD325901_60min_R1 2 VNNASLIGLGYTQTLRPGVK 20 1 Q9Y277;Q9Y277-2 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 1 VNNASLIGLGYT(0.024)QT(0.976)LRPGVK;VNNASLIGLGYT(0.065)QT(0.935)LRPGVK 162.82 1.6782000000000002e-27 12141000.0 6785.0 8836.7 8307.7 7694.799999999999 9426.5 8615.099999999999 8954.9 9721.5 9243.0 10599.4 8788.900000000001 True False 7473.808205146995 9581.399721401349 8871.510480258441 8170.090319841253 8764.415159659584 8544.941481927299 9295.683619809304 9527.597056130788 8854.548853398328 9930.152075095079 7707.92101742745 0.9696269834951433 1.2430588870511259 1.1509602213359658 1.0599603059461622 1.1370660311442504 1.1085922471970537 1.2059910316662503 1.2360787084596596 1.148759676361288 1.2883048558285963 1.0 12.912126073167862 -10.539544403085253 0.9456759270649775 1.0037362137178616 1.1434608631000984 0.0 0.11253507662334596 0.4719463174884489 0.7836552960173216 0.04181443452939431 0.01309176186399964 2.887058585794782e-11 10.539544403085253 0.13972464938223683 VNNGNTAPEDS(ph)SPAKK ddPTM_A549_MK2206_60min_R1 2 VNNGNTAPEDSSPAKK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.5)S(0.5)PAKK;VNNGNTAPEDS(0.63)S(0.37)PAKK 130.27 1.9563e-10 17920000.0 3686.7999999999997 4218.5 4316.5 3244.0 5755.6 4083.0 3734.7 4597.2 6686.5 6535.1 6293.6 True False 4309.041706394082 4433.203631329669 4928.644606724057 4038.7801456286943 4908.958864397214 4515.060349923949 4413.2466472601745 5248.867178334536 5172.018426146391 5058.816371175937 4730.725425476441 0.9108627787164607 0.9371086318930024 1.0418369622937231 0.8537337897225223 1.0376757099367742 0.9544118383216518 0.9328900433522217 1.1095269131596053 1.093282311058141 1.069353199814266 1.0 12.207845712939479 -8.246998797776254 24.83869862108621 1.0501915592028126 0.9550125434479818 0.4774982568376819 0.056930935249503385 598.6503777005953 1029716.8552236581 0.00951630350761189 0.01225745761230779 5.662408565167501e-09 8.246998797776254 -0.09517901575483079 VNNGNTAPEDSS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 VNNGNTAPEDSSPAK 15 0 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.031)S(0.969)PAK;VNNGNTAPEDS(0.302)S(0.698)PAK 193.3 2.8084e-34 51431000.0 13024.2 13679.5 14095.7 12693.6 15851.7 14967.599999999999 15225.7 14115.2 14163.900000000001 15543.6 17105.1 True False 14346.40719609071 14832.31947320943 15052.318966329898 13477.654842742759 14738.331277396248 14845.70882809196 15805.122345322734 13833.661262839823 13568.640539289043 14562.174443312624 15001.281138162723 0.956345465694524 0.9887368509797833 1.0034022312959214 0.898433588345737 0.9824715063770426 0.9896293984068472 1.0535848371720111 0.9221653227768316 0.9044987834252973 0.9707287203802195 1.0 13.872798094453804 VNNGNTAPEDSS(ph)PAKK ddPTM_A549_MK2206_60min_R1 1 VNNGNTAPEDSSPAKK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.205)S(0.795)PAKK 111.66 1.543e-07 65036000.0 3513.1 3565.0 3907.7 3546.1 4928.9 3625.9 3467.3 3568.1 5495.9 5375.9 5055.9 True False 4106.025392951356 3746.4432726538494 4461.870619644524 4414.894659190478 4203.86533927435 4009.5903313223735 4097.263528541837 4073.889101847964 4251.08742514887 4161.480456275298 3800.3804942586644 1.0804248151348101 0.9858074154189825 1.1740589202542193 1.1616980630913605 1.1061695916041145 1.0550497081488992 1.0781192921950005 1.0719687431304565 1.1185952121297067 1.0950167917560247 1.0 11.891928153139188 -10.869569276950845 0.9702895413103589 0.996529778289686 1.0939276648262561 0.0 0.055822140898268396 0.5868173968460276 0.9214491170133741 0.041837884646057484 0.008761351455409449 1.3503014158936714e-11 10.869569276950845 0.09739788653657011 VNNGNTAPEDSS(ph)PAKK ddPTM_A549_PD325901_60min_R1 2 VNNGNTAPEDSSPAKK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.329)S(0.671)PAKK;VNNGNTAPEDS(0.116)S(0.884)PAKK 170.38 2.4426e-28 249390000.0 14650.3 13404.3 13931.2 13723.8 17700.2 15943.3 14680.199999999999 15620.199999999999 16701.1 16412.5 18398.9 True False 16137.587671019155 14533.92740339494 14876.655007111036 14571.4879569888 16456.99901437505 15813.463050784258 15238.863044313679 15308.642857190145 15999.210846639708 15376.211949025228 16135.951940236657 1.0001013718179477 0.9007170731063655 0.9219570721461166 0.903044828774762 1.0198963826446352 0.9800142631406679 0.94440434011916 0.9487288332221955 0.9915256878488854 0.9529163203989881 1.0 13.977991071656746 -8.015491194184623 0.3998383725782015 1.001955340574959 0.9331153925971227 0.02928317900103594 0.038521308892026505 1.0776418821219977 0.4016335257557917 0.01505724036147711 0.02659279949628033 9.649588772477612e-09 8.015491194184623 -0.06883994797783632 VNNS(ph)TGTSEDPSLQR ddPTM_A549_MK2206_60min_R1 2 VNNSTGTSEDPSLQR 15 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 VNNS(0.609)T(0.13)GT(0.13)S(0.13)EDPSLQR;VNNS(0.466)T(0.178)GT(0.178)S(0.178)EDPS(0.002)LQR 62.357 0.0048813 3187800.0 1369.62 1118.72 1095.54 954.1 1676.98 1328.88 1227.96 1383.58 2058.09 1704.5 2253.2 True False 1600.7783720059306 1175.658069560537 1250.9040455115196 1187.854542831176 1430.2984634819734 1469.5011995608481 1451.0644370283023 1579.7067020360432 1591.9359010943874 1319.4522661733386 1693.668254843574 0.945154617752328 0.6941489670119133 0.7385767796817165 0.7013501843906766 0.8444974152355915 0.8676440591942075 0.8567583603687026 0.9327131789347636 0.9399337187443579 0.7790500072254127 1.0 10.725935600912932 -7.968666027447059 0.6948897933148787 0.9808843838881575 0.7646928331775255 0.18592321670481526 0.09042191100487039 0.29582965620864593 0.29090776216640185 0.014493015682328652 0.024014225446782955 1.0748156280769493e-08 7.968666027447059 -0.216191550710632 VNNS(ph)TGTSEDPSLQR ddPTM_A549_PD325901_60min_R1 2 VNNSTGTSEDPSLQR 15 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 VNNS(0.675)T(0.157)GT(0.071)S(0.093)EDPS(0.004)LQR;VNNS(0.902)T(0.071)GT(0.021)S(0.006)EDPSLQR 77.068 0.00058158 3714400.0 1172.3600000000001 1353.1100000000001 1712.9299999999998 1393.76 1884.6399999999999 1315.3600000000001 1285.67 1719.76 1865.05 1593.4099999999999 1688.08 True False 1291.3771241541829 1467.1413284399584 1829.179730484862 1479.8493897413764 1752.26938805504 1304.6481442662189 1334.5968753956192 1685.4580376743784 1786.668434386083 1492.8018206669476 1480.456861620786 0.872282845675354 0.9910057945449016 1.2355508477851211 0.9995896726914795 1.1836004367845459 0.881246984014047 0.9014763685410725 1.138471563318069 1.2068358631065146 1.0083386144954245 1.0 10.531826737735823 -8.33303636025142 24.999632262304786 1.1034615177301275 1.0186605619768918 0.0821913295238128 0.1210112028614125 299.9370571800998 104728.39182511343 0.02145323261858174 0.02593569400393203 4.644763864367154e-09 8.33303636025142 -0.08480095575323565 VNNSSLIGLGYT(ph)QTLKPGIK ddPTM_A549_MK2206_60min_R1 1 VNNSSLIGLGYTQTLKPGIK 20 1 P21796 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 VNNSSLIGLGY(0.004)T(0.498)QT(0.498)LKPGIK 72.033 0.00025018 1045400.0 1565.5 1969.7 1957.7 2153.2 2093.8 1774.0 1542.0 1593.1 2489.2 2461.3 2369.2 True False 1829.7181271997235 2069.949316731076 2235.33129771428 2680.734096660822 1785.804793640089 1961.7235025141044 1822.1614400287012 1818.926803664132 1925.400174435592 1905.2906205529105 1780.8622534064416 1.0274338308310091 1.1623298280210428 1.2551960677691538 1.5053012053757113 1.0027753635769376 1.1015582472825793 1.023190556452787 1.0213742248648823 1.0811617634955637 1.0698697313104715 1.0 10.798360215468382 VNNSSLIGLGYTQT(ph)LKPGIK ddPTM_A549_PD325901_60min_R1 2 VNNSSLIGLGYTQTLKPGIK 20 1 P21796 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 VNNSSLIGLGY(0.013)T(0.103)QT(0.883)LKPGIK;VNNSSLIGLGY(0.004)T(0.452)QT(0.544)LKPGIK 62.605 0.00083765 5714000.0 4388.4 4681.299999999999 5042.6 4482.1 5393.3 5226.5 5375.9 5460.8 5209.9 5489.0 5459.5 True False 4833.907137430665 5075.80958002378 5384.821159617129 4758.949137412342 5014.49321387493 5183.937116840554 5580.482816305356 5351.880060085273 4990.946020915284 5142.423603241402 4788.016110621941 1.0095845598152682 1.0601070386466296 1.1246455808014533 0.993929224017205 1.047300823142713 1.0826899903992147 1.1655104509622207 1.117765675059537 1.042382879590391 1.0740196950952667 1.0 12.225212291303418 -9.323933868178914 1.7912644737049312 1.0130025508103382 1.075195495250065 0.03732447834679864 0.051267882391614665 0.34384255049458556 2.2684407254842576 0.010842151229842636 0.00950776965975568 4.743142055517675e-10 9.323933868178914 0.062192944439726894 VNNSSLIGVGYT(ph)QTLRPGVK ddPTM_A549_PD325901_60min_R1 1 VNNSSLIGVGYTQTLRPGVK 20 1 A0A0A0MR02;P45880-2;P45880;P45880-1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 VNNSSLIGVGYT(0.573)QT(0.426)LRPGVK 112.23 8.3675e-11 5312700.0 2875.6 2952.0 2991.8 3162.5 4366.6 3810.4 3908.0 3380.6 3358.3 4192.4 3600.7 True False 3167.528795095166 3200.775400044901 3194.8415391549065 3357.8404424413866 4059.90507995221 3779.369365734092 4056.7210785396533 3313.1712809706046 3217.1623298028376 3927.6911485205374 3157.836726717909 1.0030692113671533 1.0135974963378236 1.0117184058706727 1.0633356734473574 1.2856602260661727 1.1968222846220968 1.2846519404301178 1.0491901791306804 1.0187867860877622 1.2437917119935376 1.0 11.624720864459405 -8.51082842093255 23.638966006719418 1.0101934619017494 1.1243407802885537 0.0 0.11874318549302065 341.1570525187841 669245.0030340174 0.017299614073700814 0.020348829494505102 3.084406282621997e-09 8.51082842093255 0.11414731838680425 VNNSSLIGVGYTQT(ph)LRPGVK ddPTM_A549_MK2206_60min_R1 2 VNNSSLIGVGYTQTLRPGVK 20 1 A0A0A0MR02;P45880-2;P45880;P45880-1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 VNNSSLIGVGYT(0.171)QT(0.829)LRPGVK;VNNSSLIGVGYT(0.203)QT(0.797)LRPGVK 93.96600000000001 9.8479e-07 5896800.0 4381.2 4955.2 4953.3 5035.6 5702.1 5240.2 4745.2 4400.5 7721.7 6679.7 7546.4 True False 5120.639449944058 5207.398514629552 5655.752422213895 6269.322226056671 4863.328643526198 5794.7144858367565 5607.341417136307 5024.2843509660515 5972.747279021095 5170.751130746874 5672.420609955414 0.9027256266852022 0.9180205194040578 0.9970615388230794 1.1052287298748018 0.8573638976966528 1.0215593807812329 0.9885270861781849 0.8857390339052349 1.052945063442332 0.9115598941432371 1.0 12.469748797034777 -8.801757695078607 24.999717299459242 1.0250018368126914 0.9638810812958013 0.0 0.07542884183185974 211.48984441094487 131135.16672650597 0.011484556236104523 0.01222631111852691 1.5784917083141893e-09 8.801757695078607 -0.06112075551689011 VNNSSLIGVGYTQT(ph)LRPGVK ddPTM_A549_PD325901_60min_R1 1 VNNSSLIGVGYTQTLRPGVK 20 1 A0A0A0MR02;P45880-2;P45880;P45880-1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 1 VNNSSLIGVGYT(0.156)QT(0.844)LRPGVK 123.2 5.234e-15 4702700.0 2743.6 3390.0 3298.1 3604.9 4880.4 3978.2 3504.8 4155.4 4516.0 3858.4 3769.9 True False 3022.1282522684296 3675.687197206033 3521.9288990864356 3827.566485678088 4537.617540465986 3945.802858168007 3638.1770819001486 4072.5172871517616 4326.208224813034 3614.779965521337 3306.2261993650804 0.914071835995006 1.1117470419634032 1.0652413618169194 1.1576843975203888 1.3724461869358422 1.1934461286785971 1.1004017458330029 1.231772129787683 1.3085034005367897 1.0933250623370872 1.0 11.690969716351795 -4.9082783544111095 1.1256426690611157 1.168870818785351 0.6034412045191647 0.35828802961900696 0.100978176397844 3.628272918592182 2.177632096229852 0.019099829212336047 2.929638073013075 1.2351555256330141e-05 4.9082783544111095 -0.5654296142661862 VNNSSLIGVGYTQTLRPGVK ddPTM_A549_PD325901_60min_R1 1 VNNSSLIGVGYTQTLRPGVK 20 1 A0A0A0MR02;P45880-2;P45880;P45880-1 A0A0A0MR02 VDAC2 Voltage-dependent anion-selective channel protein 2 0 86.546 1.2975999999999999e-05 2527400.0 3234.4 3436.3 3937.0 3882.3 4316.2 4177.9 3764.3 4611.7 4442.7 4338.1 4132.9 False True 3562.7539069605664 3725.8890606958994 4204.1884951042375 4122.100853656974 4013.0450020816484 4143.876567578328 3907.552496404 4519.716025691335 4255.988768905416 4064.191625655224 3624.57950061167 0.9829426851747437 1.0279507071281324 1.1599106860243389 1.137263192312748 1.1071753292773472 1.1432709827109664 1.0780705722538508 1.2469628614653383 1.174202074526767 1.1212863795564056 1.0 11.823597917701177 -5.58454139329818 5.753399950178707 1.1076698729298697 0.993160989285898 0.34387148974113746 0.061430093753300746 0.20527485908072032 13.042702795584603 0.011007209039601454 0.045117713348905096 2.6029067323682484e-06 5.58454139329818 -0.11450888364397172 VNPHKVS(ph)PASSVDSNIPSSQGYKK ddPTM_A549_PD325901_60min_R1 2 VNPHKVSPASSVDSNIPSSQGYKK 24 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 VNPHKVS(0.788)PAS(0.105)S(0.105)VDS(0.002)NIPSSQGYKK;VNPHKVS(0.716)PAS(0.123)S(0.142)VDS(0.019)NIPSSQGYKK 88.51799999999999 6.7179e-08 9198900.0 2109.8999999999996 2182.9 2098.29 2185.9300000000003 2760.7 3404.1 2703.3999999999996 3563.5 2812.4 2749.5 3507.3 True False 2324.095494773713 2366.860643888215 2240.692577442794 2320.949931492775 2566.797955897969 3376.378138225756 2806.279366357244 3492.42319698833 2694.2046083844507 2575.896100767395 3075.924334606526 0.7555762892558321 0.7694794755707101 0.7284615399128226 0.7545536492495262 0.8344802006406687 1.0976791919875573 0.9123369306534729 1.135406081903859 0.8759008074654395 0.8374380578177991 1.0 11.586804299200262 -7.027729185402493 5.7977696743564255 0.9639198374152905 0.7556965527837546 0.6165015340549356 0.08315081955891186 0.09380400870401169 9.916422696240241 0.01158029756480113 0.02078978612283709 9.381468282141247e-08 7.027729185402493 -0.20822328463153594 VNPVTSLSENYTCS(ph)DSEESSEKDK ddPTM_A549_MK2206_60min_R1 4 VNPVTSLSENYTCSDSEESSEKDK 24 1 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 VNPVTSLSENY(0.001)T(0.062)CS(0.922)DS(0.012)EES(0.001)S(0.002)EKDK;VNPVTSLSENYT(0.215)CS(0.779)DS(0.005)EESSEKDK;VNPVTSLSENYT(0.023)CS(0.972)DS(0.004)EESSEKDK;VNPVTSLSENYT(0.005)CS(0.974)DS(0.02)EESSEKDK 178.91 3.1117e-42 78605000.0 8374.8 7206.0 6828.4 5838.7 10027.3 9512.1 7924.4 8191.4 10910.1 10888.5 10929.8 True False 9788.2614957983 7572.754620685455 7796.769797881281 7269.181762109202 8552.29745308399 10518.66410837904 9364.160904904953 9352.556035110394 8438.979769849657 8428.78028760832 8215.629012865831 1.1914196077341974 0.9217498269245578 0.9490167807810445 0.8847991737121437 1.0409790217755608 1.280323648001463 1.1397984122993503 1.1383858765365518 1.0271860811429112 1.0259446080645427 1.0 13.004155321067122 -3.4631312489250887 11.857164520948325 1.0365260721441718 1.1741929643815054 0.0 0.11672639380717965 0.0 0.0 0.015603522757263047 0.0 0.0003442458798681003 3.4631312489250887 0.13766689223733364 VNPVTSLSENYTCS(ph)DSEESSEKDK ddPTM_A549_PD325901_60min_R1 2 VNPVTSLSENYTCSDSEESSEKDK 24 1 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 VNPVTSLS(0.001)ENY(0.004)T(0.322)CS(0.651)DS(0.019)EES(0.001)S(0.001)EKDK;VNPVTSLSENYT(0.099)CS(0.892)DS(0.009)EESSEKDK 133.28 3.0442e-23 168928000.0 5713.6 6007.4 6267.200000000001 5448.799999999999 5706.8 4587.4 6095.5 5906.3 4886.0 5041.1 6083.5 True False 6293.640465869988 6513.664680972133 6692.529879735148 5785.360000877346 5305.974055391213 4550.041735347623 6327.467588085586 5788.494213097281 4680.658411522693 4722.804085680493 5335.268066483847 1.1796296619858027 1.2208692421456708 1.2543943052791704 1.0843616344642504 0.994509364716525 0.85282345303903 1.185969947383663 1.0849490861500664 0.8773051987634114 0.8852046470446625 1.0 12.381345044647313 -6.54197731292887 2.6591777970371853 0.9664016676525117 1.218011685555299 0.5473969190820741 0.09287963865909979 0.15730335156382103 2.2352023285151854 0.014280249740368237 0.03462877536260126 2.87093055239539e-07 6.54197731292887 0.25161001790278725 VNPVTSLSENYTCS(ph)DSEESSEKDKLAIPK ddPTM_A549_MK2206_60min_R1 1 VNPVTSLSENYTCSDSEESSEKDKLAIPK 29 2 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 VNPVTSLSENYTCS(0.997)DS(0.003)EESSEKDKLAIPK 251.01 1.613e-138 29282000.0 2772.3 3754.8 3308.5 2408.5 4169.9 3191.3 3014.8 2882.8 5433.5 4998.0 5167.5 True False 3240.196463772462 3945.903281952504 3777.6950495416536 2998.5826081216733 3556.513233833129 3529.0012477865057 3562.550135796708 3291.445728204736 4202.820925516547 3868.9483287382486 3884.267134255353 0.8341847642756515 1.0158681536482344 0.9725631422787995 0.7719815616380172 0.9156201442656293 0.9085372158532153 0.917174337567717 0.8473788270578703 1.082011298463967 0.9960561915574735 1.0 11.923426707873555 -8.764250149943924 24.999979856696743 1.038727560921345 0.9017222977008407 0.42278605857313745 0.06610420896667717 46.974904121021034 417810.06857649673 0.011529853881990633 0.012543027860026267 1.7208770788418845e-09 8.764250149943924 -0.13700526322050444 VNPVTSLSENYTCS(ph)DSEESSEKDKLAIPK ddPTM_A549_PD325901_60min_R1 2 VNPVTSLSENYTCSDSEESSEKDKLAIPK 29 2 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A 1 VNPVTSLS(0.001)ENY(0.005)T(0.169)CS(0.803)DS(0.022)EES(0.001)SEKDKLAIPK;VNPVTSLS(0.006)ENY(0.021)T(0.146)CS(0.822)DS(0.004)EESSEKDKLAIPK 127.21 9.155699999999999e-28 118278000.0 2808.0 2989.9 3503.3 3454.4 3095.7 3397.0 4125.4 4325.5 3412.5 3605.9 3732.6000000000004 True False 3093.066092859656 3241.8693660549634 3741.055005054274 3667.770442488385 2878.2687115852273 3369.3359582717585 4282.394354505497 4239.224509210896 3269.0844922884144 3378.222858613257 3273.5138629009 0.9448764301607886 0.99033317157915 1.1428254657638905 1.1204383412135928 0.8792596677854245 1.0292719381630917 1.308194965366835 1.2950073489086156 0.9986469064137212 1.0319867274426529 1.0 11.676624373225309 VNQPASFAVSLNGAK ddPTM_A549_PD325901_60min_R1 1 VNQPASFAVSLNGAK 15 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 136.27 3.1493000000000003e-09 2348600.0 2063.2 2320.6 2998.0 3140.7 3086.3 2646.4 3384.6 3308.6 2995.7 2957.1 3448.9 False True 2272.654545152437 2516.1651061464095 3201.4623084385344 3334.693905952778 2869.52893515699 2624.848595811123 3513.4028051241876 3242.6073774535103 2869.8011468273694 2770.3882013381567 3024.707164378424 0.7513634945945145 0.8318706471089014 1.058437109595842 1.102484876957686 0.9486964453785982 0.8678025518382796 1.1615679185413608 1.0720401021431987 0.9487864414197308 0.9159194760949596 1.0 11.5625797599587 -5.617092171419861 4.72125214932426 0.9974932347660209 0.769136680924276 0.5067414845615605 0.08324219427450778 0.11766725059503064 4.373004306879292 0.011192150006227836 0.047593625982004006 2.414948249458654e-06 5.617092171419861 -0.2283565538417449 VNQQPNT(ph)SDKKSSPQK ddPTM_A549_MK2206_60min_R1 1 VNQQPNTSDKKSSPQK 16 2 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 VNQQPNT(0.25)S(0.25)DKKS(0.25)S(0.25)PQK 45.864 0.012245 38243000.0 1184.8 981.05 1161.9 901.39 1952.4 1499.6 1412.5 849.05 1790.6 1868.5 1713.7 True False 1384.7652744210998 1030.9812545966497 1326.6748913593615 1122.2305904649345 1665.204546328641 1658.2866766460827 1669.1329663038523 969.4054376065735 1385.031959000632 1446.4045522703914 1288.1409942860967 1.0750106398007724 0.8003636707238185 1.0299143472990864 0.8712016739183805 1.2927191617339355 1.287348732787691 1.295768843401266 0.7525615921755753 1.075217670382607 1.1228619838094713 1.0 10.331074797854258 -4.912610297506145 20.409248955779756 1.04164305481029 3.102836022236494 0.0 0.18301017894865967 4523.83283316041 1420516.8286157048 0.02388130901632217 148529.04857537983 1.2228965013252175e-05 4.912610297506145 2.061192967426204 VNQQPNTSDKKS(ph)SPQK ddPTM_A549_MK2206_60min_R1 1 VNQQPNTSDKKSSPQK 16 2 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 VNQQPNT(0.008)S(0.008)DKKS(0.492)S(0.492)PQK 43.12 0.014322999999999999 43831000.0 1293.3 1668.0 1448.2 1468.2 2174.6 1152.7 1382.8 1072.4 2012.4 2732.5 2192.3 True False 1511.5774218507834 1752.8940753959653 1653.5765364201977 1827.909065910002 1854.7192206752002 1274.677948899666 1634.0368607468781 1224.4159840872612 1556.594613142451 2115.226352196331 1647.8914055980688 0.9172797532141913 1.063719411025017 1.0034499426374917 1.1092412155924798 1.1255105854515137 0.7735206000646915 0.9915925619830741 0.7430198251703876 0.9445978101800443 1.283595718146641 1.0 10.68640545814974 -7.2146985045676235 24.999611809212265 0.9429533734910254 1.0463340424604985 0.083387579588861 0.14121663011235813 525.8324921553534 281244.37126574235 0.01445695069977173 0.025040125151855223 6.099601961813454e-08 7.2146985045676235 0.10338066896947318 VNQQPNTSDKKS(ph)SPQK ddPTM_A549_PD325901_60min_R1 3 VNQQPNTSDKKSSPQK 16 2 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 VNQQPNT(0.049)S(0.049)DKKS(0.451)S(0.451)PQK;VNQQPNT(0.019)S(0.019)DKKS(0.481)S(0.481)PQK;VNQQPNT(0.189)S(0.189)DKKS(0.311)S(0.311)PQK 71.742 0.00021385 81551000.0 4787.32 5326.2 6182.200000000001 6525.299999999999 6691.2 7374.7 6663.0 8346.8 6771.0 7545.3 7208.8 True False 5273.325202161284 5775.0575663005275 6601.761268588628 6928.3529609684665 6221.233195386853 7314.642888273993 6916.564111133503 8180.316526062074 6486.4384167867665 7068.888470311049 6322.163300348278 0.8341013908753013 0.9134622583985434 1.0442250468640928 1.0958832652403638 0.9840355112377649 1.1569841746844851 1.0940185791709112 1.2939109822758663 1.0259840039926584 1.1181122875964995 1.0 12.626202584940872 -5.627755412250934 2.7978942872369106 1.0521353510290676 0.841828646355717 0.43683360786395986 0.08830986553487112 0.22662932659947008 3.3243404354611195 0.01305300880065868 0.07457930996742394 2.3563759837720953e-06 5.627755412250934 -0.21030670467335066 VNQSALEAVTPS(ph)PSFQQR ddPTM_A549_MK2206_60min_R1 4 VNQSALEAVTPSPSFQQR 18 0 Q9UKG1 Q9UKG1 APPL1 DCC-interacting protein 13-alpha 1 VNQSALEAVT(0.303)PS(0.694)PS(0.003)FQQR;VNQSALEAVT(0.208)PS(0.585)PS(0.208)FQQR;VNQSALEAVT(0.025)PS(0.973)PS(0.002)FQQR;VNQSALEAVT(0.079)PS(0.9)PS(0.021)FQQR 211.16 2.0077e-55 45845900.0 6584.900000000001 7540.599999999999 6597.700000000001 7501.6 9511.4 7498.099999999999 6081.429999999999 7202.9 10283.8 9927.7 10316.0 True False 7696.270134651839 7924.3843314933 7533.353068871385 9339.49233675962 8112.285659675394 8291.543965164044 7186.347111695033 8223.933132956112 7954.535719854064 7685.025674912907 7754.252492884032 0.9925225083545574 1.0219404563838224 0.9715124798663233 1.2044349014080133 1.046172492721887 1.0692899119254986 0.9267620725904712 1.0605707178742372 1.025828824526133 0.991072406007587 1.0 12.92077199734996 VNQSALEAVTPS(ph)PSFQQR ddPTM_A549_PD325901_60min_R1 2 VNQSALEAVTPSPSFQQR 18 0 Q9UKG1 Q9UKG1 APPL1 DCC-interacting protein 13-alpha 1 VNQSALEAVT(0.099)PS(0.894)PS(0.007)FQQR;VNQSALEAVT(0.003)PS(0.996)PS(0.001)FQQR 252.82 1.5818999999999998e-86 70709000.0 4514.6 4478.1 5117.6 4642.4 4990.3 4113.7 4880.0 4291.9 5471.8 4929.8 5433.7 True False 4972.918868527136 4855.485202893317 5464.911110628771 4929.150504344628 4639.798543600401 4080.1993910928877 5065.711070438463 4206.2946875695825 5241.839274697064 4618.531586675071 4765.389347062266 1.0435493317230848 1.0189062947997298 1.1467921532996546 1.0343646962201138 0.9736452167252003 0.8562153255343596 1.0630214451545994 0.8826759748734171 1.0999813221827335 0.9691824214787971 1.0 12.218378376263958 -6.51035681112744 24.611640136863482 1.0173381533719277 1.068983873723263 0.10193023348323493 0.07789783020967 1085.5812468771167 2133688.3249999844 0.011770364268054811 0.02613855005578602 3.087757525621802e-07 6.51035681112744 0.05164572035133541 VNRPGWNEDDDVS(ph)VSDESELPTSTTLK ddPTM_A549_PD325901_60min_R1 1 VNRPGWNEDDDVSVSDESELPTSTTLK 27 1 Q86WG5-3;Q86WG5 Q86WG5-3 SBF2 Myotubularin-related protein 13 1 VNRPGWNEDDDVS(0.991)VS(0.009)DESELPTSTTLK 126.34 4.8097e-19 7193200.0 1735.7 2011.1 1839.7 2028.6 1788.1 1779.3 1894.7 1941.1 2428.9 2577.6 1949.3 True False 1911.9069862451945 2180.5824549560625 1964.5531050148015 2153.902014715129 1662.5100246101185 1764.8099707250346 1966.8038453196225 1902.3832377365081 2326.821779727274 2414.8498961040327 1709.5484576308 1.1183695774817848 1.2755312347086383 1.1491649132528265 1.2599245169687336 0.9724848787931579 1.0323252101147338 1.1504814833066173 1.112798662854489 1.3610738960578692 1.412565923665413 1.0 10.739399601608788 VNS(ph)GDTEVGSSLLR ddPTM_A549_MK2206_60min_R1 2 VNSGDTEVGSSLLR 14 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 VNS(0.999)GDT(0.001)EVGSSLLR;VNS(0.943)GDT(0.057)EVGSSLLR 180.64 3.7164e-24 33563000.0 3866.5 4687.2 3788.7 3026.6 4517.9 3301.79 3401.1 3929.5 4887.9 4670.2 4623.5 True False 4519.070673150896 4925.758459350102 4325.994630254937 3768.117135869238 3853.3228948259425 3651.183226249178 4019.0358454485154 4486.518658589045 3780.798454372379 3615.1985764052356 3475.3573478915605 1.3003182754408087 1.4173386982315574 1.244762537262375 1.0842387583985542 1.1087558800719262 1.0505921724752385 1.156438156751505 1.2909517524322898 1.0878876834539402 1.0402379423222519 1.0 11.762945612865177 -2.0000000000000004 0.1884740577053982 1.0073041384638943 2.600356788819703 0.517253647070357 0.08780977062632395 28.25703416476302 0.3044546019826755 0.08730699230830088 13.217424923007654 0.00999999999999999 2.0000000000000004 1.5930526503558087 VNS(ph)GDTEVGSSLLR ddPTM_A549_PD325901_60min_R1 2 VNSGDTEVGSSLLR 14 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 VNS(0.945)GDT(0.055)EVGSSLLR;VNS(0.988)GDT(0.012)EVGSSLLR 220.93 8.189199999999999e-40 37806000.0 6278.0 7041.5 6479.9 6732.6 8863.7 7084.5 7138.8 7941.799999999999 7951.0 10218.9 10175.3 True False 6915.3379383806705 7634.911917146395 6919.664980804152 7148.457411156002 8241.144290104981 7026.806180858492 7410.470940501248 7783.394568778422 7616.847120347304 9573.67691003161 8923.802606541154 0.7749317463960624 0.8555671000107061 0.7754166341299428 0.8010550800301407 0.9235014100451098 0.7874228611587438 0.8304162773691752 0.8722060439877041 0.8535427615537068 1.0728248183138989 1.0 13.123442886353308 -12.499237872693536 0.2194554150402071 1.2647651583999828 0.7991757090717038 0.7592769160401873 0.04498182838439526 5.66311113307874 0.18063715472976044 0.7511209979050951 0.031134550159603383 3.167831896186528e-13 12.499237872693536 -0.46558944932827906 VNS(ph)NGKES(ph)PGSSEFFQEAVSHGK ddPTM_A549_PD325901_60min_R1 1 VNSNGKESPGSSEFFQEAVSHGK 23 1 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 2 VNS(0.773)NGKES(0.856)PGS(0.192)S(0.18)EFFQEAVSHGK 69.766 0.0010479 3048600.0 1471.1 1072.1 1504.3 1608.1 1715.1 1289.4 1338.0 1343.8 1580.6 1724.5 1796.7 True False 1620.4449890334195 1162.449629535277 1606.3908440907553 1707.4286847399178 1594.6372927737905 1278.899553899207 1388.9183221816936 1316.9968548092943 1514.172878684562 1615.614775694989 1575.717290219698 1.0283856114871248 0.7377272793479341 1.0194664068620969 1.0835882142930955 1.0120072316725384 0.8116300822724953 0.8814514702621816 0.8358078336664497 0.9609419710520819 1.0253202054219561 1.0 10.621792999288456 -9.116083029188736 3.546810620556762 0.9848157468596983 0.9248249366746233 0.08312118847875893 0.10110416757250916 0.4836577241032744 12.650941682287742 0.019143615166907695 0.018693947599505285 7.65450252785671e-10 9.116083029188736 -0.059990810185075016 VNS(ph)PGTLAR ddPTM_A549_PD325901_60min_R1 2 VNSPGTLAR 9 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;P53814-2 A0A087WVP4 SMTN Smoothelin 1 VNS(0.978)PGT(0.022)LAR;VNS(0.92)PGT(0.08)LAR 119.05 0.00015766 53331000.0 7078.9 6705.4 7113.1 7197.3 7952.2 7653.299999999999 7198.700000000001 7109.4 7353.8 7002.9 8252.1 True False 7797.544716789254 7270.487590603342 7595.837740545076 7641.860874745728 7393.6649056006845 7590.974062243525 7472.650467779787 6967.597439783593 7044.745359528365 6560.73569887761 7237.14401437189 1.0774339575534897 1.0046072837800708 1.0495628835713195 1.055922178634297 1.0216274390723699 1.048890839697121 1.0325413523539417 0.9627551180337135 0.9734151131355891 0.9065365682718164 1.0 12.82120476523115 -8.1473235700678 5.745995693550849 0.9853136704237955 1.0410709540763345 0.5764234099497727 0.030860353325775434 0.1093406209337699 4.8531553290648946 0.0031651571030682476 0.004102717820671567 7.123221184786124e-09 8.1473235700678 0.05575728365253907 VNS(ph)TTEANIHLK ddPTM_A549_MK2206_60min_R1 2 VNSTTEANIHLK 12 0 Q2KHM9;Q2KHM9-2 Q2KHM9 KIAA0753 Uncharacterized protein KIAA0753 1 VNS(0.645)T(0.143)T(0.212)EANIHLK;VNS(0.696)T(0.181)T(0.122)EANIHLK 75.018 0.0003925 7537900.0 3277.1000000000004 3473.7 2773.5 2598.5 3372.7 3113.5 2449.3999999999996 2727.3 3718.7 4026.1 4192.6 True False 3830.1943625973868 3650.496492627677 3166.8240048069433 3235.1326166510985 2876.5802977886724 3442.9685034259674 2894.424274452852 3113.9031270059572 2876.420387543642 3116.601213752113 3151.4617101265603 1.2153707437694266 1.1583502604196565 1.0048746569349136 1.0265498724784372 0.9127765343127558 1.0924989164116166 0.9184386613844069 0.9880821705686867 0.9127257927014849 0.9889383087656022 1.0 11.6218054189328 -5.61022229252441 1.2030759690596862 0.9647810699649358 1.2698513850742401 0.6947259925384872 0.052294631486417095 0.3431198162289964 0.6120013236689472 0.0076517876100751754 0.11098869413745684 2.45345280067576e-06 5.61022229252441 0.30507031510930427 VNSEGEFDKDRDS(ph)ISETVDLNNQETVK ddPTM_A549_MK2206_60min_R1 1 VNSEGEFDKDRDSISETVDLNNQETVK 27 2 Q8TEY7-3;Q8TEY7-2;Q8TEY7 Q8TEY7-3 USP33 Ubiquitin carboxyl-terminal hydrolase 33 1 VNS(0.293)EGEFDKDRDS(0.585)IS(0.061)ET(0.061)VDLNNQETVK 42.903999999999996 0.012095999999999999 4799400.0 1226.5 1431.9 1245.0 1277.3 1911.9 1242.2 1345.5 1413.9 2265.7 1805.3 2078.6 True False 1433.503214953982 1504.7775938606019 1421.559720924696 1590.2385573401755 1630.6620426786146 1373.6487794943748 1589.9599335658984 1614.3246548871487 1752.5225675794313 1397.4814761646974 1562.426253558428 0.9174853607901022 0.9631031163445115 0.9098411638226711 1.017800714573507 1.0436729663014683 0.8791767140150697 1.0176223869413115 1.033216544595639 1.1216673833968538 0.8944303598214196 1.0 10.609572380909524 -7.9924938163677135 24.574906453482996 1.0557262297769336 0.9593523713944037 0.02861861105572716 0.07080657002126525 123.37621816361327 403925.34700671805 0.009460338506636351 0.013056916310162823 1.0174338526461097e-08 7.9924938163677135 -0.09637385838252999 VNSEGEFDKDRDS(ph)ISETVDLNNQETVK ddPTM_A549_PD325901_60min_R1 1 VNSEGEFDKDRDSISETVDLNNQETVK 27 2 Q8TEY7-3;Q8TEY7-2;Q8TEY7 Q8TEY7-3 USP33 Ubiquitin carboxyl-terminal hydrolase 33 1 VNSEGEFDKDRDS(0.918)IS(0.041)ET(0.041)VDLNNQETVK 120.8 2.8773000000000005e-18 4711100.0 1748.0 1880.9 1872.8 1938.1 2104.4 2545.5 2142.3 1899.8 2071.1 2306.8 2055.6 True False 1925.4556731904136 2039.410044019124 1999.8994700612702 2057.812035255541 1956.594203785881 2524.770291957834 2223.8263988115405 1861.9069986357326 1984.058869444259 2161.1482543190496 1802.7742315220178 1.0680514728484998 1.131262034013723 1.1093454937908818 1.1414696301256781 1.0853240353530007 1.4004916687910838 1.2335579019975471 1.0328009831069036 1.100558702666384 1.198790295828929 1.0 10.816003018394067 -9.42485110807377 0.8140588944600313 1.018586703296891 1.157697592487049 0.0 0.10772545066469912 0.550001142767215 0.782757688605733 0.031289747709385696 0.02179057516294007 3.759662770946107e-10 9.42485110807377 0.13911088919015802 VNSNGKES(ph)PGSSEFFQEAVSHGK ddPTM_A549_MK2206_60min_R1 1 VNSNGKESPGSSEFFQEAVSHGK 23 1 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 VNS(0.032)NGKES(0.914)PGS(0.045)S(0.009)EFFQEAVSHGK 142.28 2.1480000000000002e-27 7395300.0 1322.5 1717.8 1523.4 1388.5 2020.0 1193.7 1462.3 1435.9 1878.3 2340.4 2216.0 True False 1545.7056679793247 1805.2286826829688 1739.4410271941229 1728.682562332134 1722.8606758778196 1320.0165416860698 1727.98098168221 1639.4432222593236 1452.8680490287531 1811.702014521607 1665.7060415113438 0.9279582528120393 1.0837618629545416 1.0442665055209124 1.0378077039113396 1.0343125575234258 0.7924666830699493 1.0373865127572945 0.9842332208699975 0.8722235573514061 1.0876481019891102 1.0 10.701918105609934 VNSNGKES(ph)PGSSEFFQEAVSHGK ddPTM_A549_PD325901_60min_R1 2 VNSNGKESPGSSEFFQEAVSHGK 23 1 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 VNS(0.077)NGKES(0.922)PGS(0.001)SEFFQEAVSHGK;VNS(0.005)NGKES(0.645)PGS(0.175)S(0.175)EFFQEAVSHGK 130.46 2.3450999999999996e-22 22090000.0 7683.700000000001 7278.8 6968.700000000001 6874.8 8901.0 8200.0 7371.4 8146.4 9474.6 8484.0 9308.3 True False 8463.743567559022 7892.210020950823 7441.637888197336 7299.440782196375 8275.824466783 8133.221918701339 7651.922660784854 7983.9136612728325 9076.415510809029 7948.318792111504 8163.438110175325 1.0367866398116476 0.9667752623877396 0.9115813444976939 0.8941625677418905 1.0137670372569605 0.9962985948976175 0.9373406838531804 0.9780087205317666 1.1118373641487798 0.9736484413600581 1.0 12.99496116968326 -8.614298599169 7.900213571647639 1.0527129059086267 0.9631646047162957 0.18256514764891185 0.05197563321866918 0.19809162986236972 15.063162455173655 0.009410351565465486 0.01066998774332102 2.430532321968842e-09 8.614298599169 -0.08954830119233093 VNSNGKESPGS(ph)SEFFQEAVSHGK ddPTM_A549_MK2206_60min_R1 1 VNSNGKESPGSSEFFQEAVSHGK 23 1 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 VNS(0.004)NGKES(0.269)PGS(0.363)S(0.363)EFFQEAVSHGK 104.51 1.4828999999999999e-10 8894000.0 1562.7 1497.3 1674.3 1278.0 2013.7 1784.3 1142.0 1331.1 2139.6 2496.2 2014.1 True False 1826.445555653151 1573.5061745146156 1911.7409162604163 1591.110057371601 1717.4873975322594 1973.1134416775176 1349.4866177125662 1519.7875013227845 1654.9840162391104 1932.3066863138074 1513.943383667868 1.2064160227895553 1.0393428126106297 1.2627558843242832 1.0509706469450526 1.134446252125532 1.303294074906029 0.8913719180456614 1.0038601956440127 1.093161101064123 1.276340124181104 1.0 10.564095539108017 -7.762934280008994 24.999989293838176 1.0310558353420127 1.1581451090409096 0.18094832027050167 0.11510504852988933 35.63233540865578 595902.522035814 0.013455791020181617 0.01913525444286744 1.7260990756748782e-08 7.762934280008994 0.1270892736988969 VNSVT(ph)PK ddPTM_A549_MK2206_60min_R1 2 VNSVTPK 7 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 VNS(0.027)VT(0.973)PK;VNS(0.207)VT(0.793)PK 106.88 0.009964 74716000.0 11857.5 13360.8 13377.3 13835.6 18171.5 13053.900000000001 13397.4 14232.900000000001 19264.5 19284.7 20352.7 True False 13858.7561119583 14040.807651409135 15274.402292952565 17225.322621103685 15498.496421640482 14435.25503352248 15831.534161245458 16250.457161428183 14901.121509085046 14928.272876194173 15298.56288405591 0.9058861421814877 0.917786053358149 0.9984207280588084 1.1259438387546739 1.013068779015377 0.9435693498091141 1.0348379963025813 1.0622211566267008 0.9740209993590264 0.9757957652187284 1.0 13.901108514988657 -5.755901049262888 5.512516090991098 1.0042363554527434 0.9100696472729424 0.3985380302826269 0.04732966620888042 0.13170812371028773 12.624474826930985 0.00673331646763397 0.024714176459865178 1.7542801558737056e-06 5.755901049262888 -0.094166708179801 VNSVT(ph)PK ddPTM_A549_PD325901_60min_R1 2 VNSVTPK 7 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 VNS(0.001)VT(0.999)PK;VNS(0.268)VT(0.732)PK 102.06 0.011411 139232000.0 7474.9 7543.6 8032.4 8280.900000000001 9501.7 8682.3 8905.7 9338.599999999999 8500.9 8879.8 8862.3 True False 8233.74634526946 8179.325646266501 8577.526966745058 8792.392385711579 8834.333371085493 8611.594227407393 9244.611286886027 9152.334297010018 8143.636735676066 8319.12791256385 7772.293282748387 1.059371545274202 1.0523696608852338 1.1036031007455664 1.1312481485004475 1.136644366045018 1.1079862679039587 1.1894316066797994 1.1775590503416553 1.0477778487530731 1.0703569216860658 1.0 12.924124625830267 -8.948440926477744 5.159102566434503 1.0203913313500026 1.119932226764456 0.4025635536093086 0.042898822649635134 0.11955447154899315 6.381475211785496 0.008059798516421114 0.00841314937989753 1.1260536263326949e-09 8.948440926477744 0.09954089541445343 VNTLIRPDGEKK ddPTM_A549_PD325901_60min_R1 2 VNTLIRPDGEKK 12 2 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 ; 80.52199999999999 0.00027039999999999996 20333000.0 6004.4 6180.6 6504.8 6347.9 7696.0 7245.7 6532.4 7050.3 6761.0 7345.5 7741.9 False True 6613.962267794343 6701.460852817584 6946.25484454002 6739.995365873095 7155.45950975867 7186.693421504182 6780.994056666437 6909.676235646644 6476.858682010833 6881.703876409128 6789.695379947615 0.9741176735745355 0.9870046412699723 1.0230583930252277 0.9926800819045134 1.0538704771485459 1.0584706705294973 0.9987184515955052 1.0176710218919947 0.953924781535752 1.0135511965283812 1.0 12.729131133992581 -8.738043850571719 24.679808524893502 0.9782422565015337 1.014352574306928 0.09036379460831756 0.028583555099323442 217.04005680789655 228953.97725138333 0.005074344402215627 0.005751938833425812 1.82791564278046e-09 8.738043850571719 0.0361103178053942 VNVGAGSHPNK ddPTM_A549_MK2206_60min_R1 2 VNVGAGSHPNK 11 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 74.944 0.0014655999999999998 6963300.0 2680.3 3060.2 2734.2 2115.23 2757.2 2728.9 2674.33 2538.8 3544.0 4467.5 3844.8 False True 3132.669112956512 3215.951108828978 3121.950673857271 2633.4614449562837 2351.619532440753 3017.670386702787 3160.221143911773 2898.682674748916 2741.2896586050692 3458.288647186497 2890.0300489182355 1.0839572806964752 1.1127742806801395 1.0802485168020468 0.9112228594100646 0.813700720281779 1.0441657476303157 1.093490756296694 1.0029939570468893 0.9485332720437142 1.1966272283158323 1.0 11.496868777803249 -6.1330759076031836 6.358471063538292 0.9755484871625414 1.0976411187127948 0.11387206776831116 0.09552804527780047 0.20129803815321382 9.543853449849616 0.010018303808312638 0.026927869755837885 7.360784317275004e-07 6.1330759076031836 0.1220926315502534 VNVGAGSHPNK ddPTM_A549_PD325901_60min_R1 2 VNVGAGSHPNK 11 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 109.16 0.00011513 17230200.0 3455.3 3532.6 3377.1 3446.5 4332.0 3958.2999999999997 3644.9 4630.4 4360.8 3735.2 4308.6 False True 3806.0795123425805 3830.304599660779 3606.2903141520273 3659.3824774305886 4027.7352645886886 3926.0649171701843 3783.608664065811 4538.043039521469 4177.530741090497 3499.3588345467806 3778.6695144657374 1.0072538754108848 1.0136648852188235 0.9543809799576816 0.9684314712947277 1.0659136103777962 1.0390072225528533 1.0013071134115237 1.2009632020341157 1.1055559966537996 0.9260822681502888 1.0 11.883662629486219 -6.766318821316989 24.99261942687645 1.058901136537208 0.9856599605856723 0.15551041872740956 0.06725547507935595 136.15985915123073 697420.8439879573 0.009035921464094461 0.017468625038003928 1.7126995305363094e-07 6.766318821316989 -0.07324117595153579 VNVPVIGGHAGK ddPTM_A549_MK2206_60min_R1 2 VNVPVIGGHAGK 12 0 G3XAL0;P40926;P40926-2 G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial 0 ; 98.156 0.00027073 6711500.0 4787.9 4638.0 4998.3 4332.1 6731.200000000001 4656.3 5270.0 4465.1 6499.1 6271.5 8095.3 False True 5595.980467083711 4874.0543895002975 5707.134098873819 5393.4646944753595 5741.049396766725 5149.026575398211 6227.490784015081 5098.0415987952565 5027.064226930084 4854.763794254083 6085.013591086089 0.919633191170064 0.8009931804655752 0.9378999756441261 0.8863521196363839 0.9434735536460863 0.8461816063880282 1.023414441199886 0.837802828618716 0.8261385371914715 0.7978229993382112 1.0 12.571044769913433 -11.018165928472321 1.323777978600289 0.999604831330235 0.8851154622214421 0.0 0.0849735036640599 0.41404299468939654 1.2996132208916247 0.04191013265576042 0.009619465383966717 9.590341486780004e-12 11.018165928472321 -0.11448936910879293 VNVTVDYIRPAS(ph)PATETVPAFSER ddPTM_A549_MK2206_60min_R1 2 VNVTVDYIRPASPATETVPAFSER 24 1 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 VNVTVDYIRPAS(0.982)PAT(0.018)ETVPAFSER;VNVT(0.003)VDYIRPAS(0.988)PAT(0.009)ETVPAFSER 182.72 1.0034e-50 86407000.0 2275.34 2068.6800000000003 2251.0699999999997 1772.15 2471.3 1885.12 2112.3999999999996 2166.3999999999996 3243.8 2661.7 2812.3 True False 2659.361765277943 2173.9669759533153 2570.3055750859066 2206.3268295548373 2107.775043711313 2084.602147158618 2496.195736651509 2473.4938343217486 2509.084479284177 2060.420121369066 2113.9282944685706 1.258018908321813 1.0284014749420998 1.2158906155007811 1.0437093989082042 0.9970891866231422 0.9861271797219002 1.1808327383588184 1.1700935366606513 1.1869297959867398 0.9746878012657679 1.0 11.04571072525728 -11.035908861802023 1.3632655408598664 1.0006814067965606 1.1210123124834268 0.23878267275891463 0.08907359118570055 0.578660974165571 1.9343632947979763 0.06277909459537319 0.014433019494964847 9.206427515459518e-12 11.035908861802023 0.12033090568686622 VNVTVDYIRPAS(ph)PATETVPAFSER ddPTM_A549_PD325901_60min_R1 2 VNVTVDYIRPASPATETVPAFSER 24 1 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 VNVT(0.001)VDYIRPAS(0.78)PAT(0.205)ET(0.015)VPAFSER;VNVT(0.016)VDYIRPAS(0.942)PAT(0.021)ET(0.021)VPAFSER 102.51 3.2024000000000005e-11 111661000.0 4345.2 3869.0 4334.1 4335.799999999999 5399.4 4792.6 3867.2 5378.6 5319.0 4640.5 5276.700000000001 True False 4786.321505232824 4195.054208256681 4628.238089060523 4603.612518683747 5020.164770918781 4753.570654581464 4014.3684122130385 5271.319603569928 5095.460927320755 4347.498038047317 4627.6993517572655 1.034276676468908 0.9065096691434162 1.000116415795908 0.9947950739141315 1.0848078903424194 1.0271995419876188 0.8674652580204182 1.1390799623938972 1.1010786440536307 0.9394512710503659 1.0 12.176079424427698 -6.568045268172728 0.7261904960744696 1.0457689372145187 0.9650828562055086 0.0 0.07913630380156132 1.5313761741965997 1.3080549306829046 0.013351956515794884 0.07077778685529124 2.7036765348885365e-07 6.568045268172728 -0.08068608100901009 VNVVQLAS(ph)PSENNLVTEK ddPTM_A549_PD325901_60min_R1 1 VNVVQLASPSENNLVTEK 18 0 F8W9J4;Q03001;Q03001-9 F8W9J4 DST Dystonin 1 VNVVQLAS(0.873)PS(0.112)ENNLVT(0.015)EK 56.225 0.0029404 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VNVVQYPELS(ph)DHEFIEEKENR ddPTM_A549_MK2206_60min_R1 1 VNVVQYPELSDHEFIEEKENR 21 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 VNVVQYPELS(1)DHEFIEEKENR 64.722 0.00061642 3928700.0 473.13 780.81 693.28 513.29 655.65 868.56 675.34 462.4 1233.8 1069.4 911.69 True False 552.9827770820851 820.5498938908416 791.5975287732316 639.046073042464 559.2047535343032 960.4704426965338 798.0405362574468 527.9466160406095 954.3462699737398 827.8217972694441 685.2922116360454 0.8069299018617345 1.197372274130894 1.1551240701880972 0.9325161765910416 0.8160092060571871 1.4015487501361448 1.1645259098337475 0.7703963463705593 1.3926121642260652 1.207983664797719 1.0 9.420575480600139 -7.250628577914273 24.994733493455428 1.1669032161016661 1.0004926502472176 0.15745792129939962 0.19807360425647072 1283.800587342764 2968164.8732841043 0.03230037004389818 0.055596884127929055 5.615280068697446e-08 7.250628577914273 -0.16641056585444858 VNVVQYPELS(ph)DHEFIEEKENR ddPTM_A549_PD325901_60min_R1 2 VNVVQYPELSDHEFIEEKENR 21 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 VNVVQYPELS(1)DHEFIEEKENR;VNVVQY(0.001)PELS(0.999)DHEFIEEKENR 83.70100000000001 3.2262e-05 10610900.0 2144.98 2095.55 2037.0 2226.87 2597.35 2469.2 2093.7 2702.8 2438.8 2408.1 2658.1 True False 2362.736790549182 2272.1493528333654 2175.2430694760833 2364.4187023112886 2414.9210963710616 2449.0916538606502 2173.376899216601 2648.8905336944194 2336.3057171554533 2256.0521550310837 2331.1705510841966 1.0135409395294155 0.9746817330789541 0.9331119374618071 1.014262427608151 1.0359263912492005 1.050584502588886 0.9323114081918168 1.136292036832078 1.0022028272744217 0.9677765335452714 1.0 11.18683884219725 -6.373417393807053 24.906663134698835 1.0125519441329263 0.97382797143837 0.11939199982445692 0.0515673279296028 36.14174734570408 7990.215235747993 0.0066124982697527875 0.015366057975636643 4.2323600484545586e-07 6.373417393807053 -0.0387239726945563 VPAAFPTKVPVPGPGS(ph)GGNGPER ddPTM_A549_MK2206_60min_R1 1 VPAAFPTKVPVPGPGSGGNGPER 23 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPAAFPT(0.002)KVPVPGPGS(0.998)GGNGPER 77.52199999999999 2.4611999999999997e-05 6165200.0 1988.6 2672.7 2911.7 2687.7 3152.3 3014.8 2654.1 2439.9 4090.9 4036.0 3915.8 True False 2324.2270633978733 2808.7290139752986 3324.6228429047706 3346.186620655437 2688.6008458265605 3333.8241349377236 3136.315614773135 2785.763296880371 3164.3176818249103 3124.2647968762644 2943.398789417924 0.7896405583075965 0.954246846901348 1.1295183156483652 1.1368444645304643 0.9134341073634296 1.1326443929118448 1.0655421976963446 0.946444398528571 1.0750557121927315 1.0614480131297832 1.0 11.52326730520718 -5.381250034317084 3.3254939942329624 1.042031943790233 0.7832492482915024 0.5382388485461307 0.07088391269032565 0.15236876006881653 2.6969578318180356 0.00932189978492347 0.08217161394206021 4.156712291522181e-06 5.381250034317084 -0.25878269549873056 VPAAFPTKVPVPGPGS(ph)GGNGPER ddPTM_A549_PD325901_60min_R1 1 VPAAFPTKVPVPGPGSGGNGPER 23 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPAAFPT(0.001)KVPVPGPGS(0.999)GGNGPER 66.501 0.00015981 10370000.0 2857.2 2517.5 2812.5 3491.3 3594.2 3606.5 3606.6 3696.8 4094.9 4197.6 3804.0 True False 3147.260840640531 2729.6585601670195 3003.373162936415 3706.9496716824046 3341.755791316868 3577.1298597312634 3743.851136607246 3623.0644239165013 3922.805593398337 3932.562819633105 3336.13211554279 0.9433861524780983 0.8182105700939554 0.9002560626852648 1.1111519398203697 1.0016856873706763 1.0722386691659131 1.1222130919710656 1.0860074776526132 1.1758543899152791 1.178779102095984 1.0 11.703960707336838 -6.2159276331338225 5.763890271440688 1.0826576455187353 0.8777355243714342 0.6859112922629726 0.061794121943580964 0.10386860403794874 8.72454244571889 0.009814181351988027 0.02615130396583618 6.082363437845689e-07 6.2159276331338225 -0.20492212114730113 VPAAFPTKVPVPGPGS(ph)GGNGPEREGPEEPGLAK ddPTM_A549_MK2206_60min_R1 1 VPAAFPTKVPVPGPGSGGNGPEREGPEEPGLAK 33 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPAAFPTKVPVPGPGS(1)GGNGPEREGPEEPGLAK 58.672 0.0004463 3619000.0 792.21 844.25 885.29 1035.0 1151.3 843.34 930.94 896.33 1426.5 1348.1 1681.2 True False 925.9156803250676 887.2187189166934 1010.8374340059638 1288.5750464629157 981.9452951178883 932.5816790362148 1100.0797477174574 1023.3875223955004 1103.4000276524075 1043.5632737038873 1263.7116412404648 0.7326953793162693 0.702073708876968 0.7998956415513601 1.0196749039979127 0.7770327209726474 0.7379703158552758 0.8705148483380388 0.8098267745566851 0.873142251478593 0.825792245357114 1.0 10.303451585825357 -14.999999999613445 0.09236263586810248 1.6389525819459707 0.6621685408280877 0.08405432101107291 0.09429697207070611 79.88615664932951 0.5366558841737001 9.906036639582142 0.7353695750246017 1.0000000008900754e-15 14.999999999613445 -0.976784041117883 VPAAFPTKVPVPGPGS(ph)GGNGPEREGPEEPGLAK ddPTM_A549_PD325901_60min_R1 1 VPAAFPTKVPVPGPGSGGNGPEREGPEEPGLAK 33 2 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPAAFPTKVPVPGPGS(1)GGNGPEREGPEEPGLAK 88.98700000000001 1.3814000000000002e-09 7363100.0 1305.2 1361.6 1547.8 1716.5 1749.2 2390.9 2127.2 1844.8 1963.3 1530.7 1948.9 True False 1437.7029431625429 1476.3468105356148 1652.8430156775069 1822.5243065456548 1626.3422264124051 2371.4293031003676 2208.151760048503 1808.004016782397 1880.7893285596595 1434.051340769104 1709.19765509499 0.8411566321056305 0.8637659934383456 0.967028600086424 1.0663040059251465 0.9515237875294299 1.3874517648858895 1.291922998762705 1.0578086223046659 1.1003931130803786 0.8390201896745554 1.0 10.739103527513882 -6.000397003394195 1.4832813155586277 1.0877682209906292 0.8318450841089456 0.29996940296672303 0.14138139271221972 0.42627681488255614 1.6543036797507114 0.01939931983435529 0.10585329436999476 9.990862835959476e-07 6.000397003394195 -0.25592313688168356 VPAEDET(ph)QS(ph)IDSEDSFVPGR ddPTM_A549_PD325901_60min_R1 1 VPAEDETQSIDSEDSFVPGR 20 0 J3KSI3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL E3 ubiquitin-protein ligase rififylin 2 VPAEDET(0.625)QS(0.625)IDS(0.671)EDS(0.079)FVPGR 49.423 0.023278 1521900.0 292.48 181.38 199.25 276.81 271.62 222.6 272.95 408.35 0.0 206.4 354.7 True False 322.17235428760404 196.66552915316532 212.77230318758444 293.9079250188775 252.54234823813027 220.78721940279473 283.3372616139711 400.20513890562205 0.0 193.3678687755557 311.07414862855615 1.035677042621436 0.6322143129546822 0.68399223826744 0.9448162964188442 0.8118397152303489 0.7097575300814527 0.910835126811824 1.2865265103835242 0.0 0.6216134308429795 1.0 8.281114696524101 -8.750663569720086 24.999823101835865 0.5277777436060902 0.8580142921563501 0.22453031609966623 0.27654392799810107 321.87068897997864 746737.7229483742 0.06503077404328188 0.07337892208812262 1.775564405836003e-09 8.750663569720086 0.33023654855025986 VPAEDETQSIDS(ph)EDSFVPGR ddPTM_A549_MK2206_60min_R1 2 VPAEDETQSIDSEDSFVPGR 20 0 J3KSI3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL E3 ubiquitin-protein ligase rififylin 1 VPAEDETQSIDS(0.999)EDSFVPGR;VPAEDETQS(0.005)IDS(0.995)EDSFVPGR 154.12 1.2221999999999999e-26 12036000.0 3631.6000000000004 3280.8 3416.0 3165.1000000000004 3321.8 3537.8 2878.3 2839.1 3791.1000000000004 4435.2 4693.0 True False 4244.525295904513 3447.7787065701946 3900.440166007038 3940.5496420867394 2833.167620361851 3912.1676477984197 3401.2498526813265 3241.5511193790953 2932.421903142686 3433.2852396198205 3527.5985797891394 1.2032336446167373 0.9773727448252584 1.1056927475688532 1.1170629403990415 0.8031434292422246 1.1090172419879667 0.9641827934074728 0.9189115615226429 0.8312799307561719 0.9732641517916257 1.0 11.784470684589008 -6.421626010329589 0.6454534821132552 0.9228152435910564 1.1410640907265859 0.3077558150739359 0.09856205418110427 1.0704740548168343 0.6415811887194933 0.018790172492194054 0.13044141600563544 3.7876861827558763e-07 6.421626010329589 0.2182488471355295 VPAEDETQSIDS(ph)EDSFVPGRR ddPTM_A549_MK2206_60min_R1 1 VPAEDETQSIDSEDSFVPGRR 21 1 J3KSI3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL E3 ubiquitin-protein ligase rififylin 1 VPAEDETQSIDS(0.993)EDS(0.007)FVPGRR 94.449 6.614e-07 3075000.0 942.24 1111.2 970.96 858.91 1332.6 1133.5 969.17 1096.1 1521.4 1366.3 1566.9 True False 1101.2670764437344 1167.7553336810536 1108.656728216099 1069.3429885579355 1136.5763052845448 1253.4462176435954 1145.2556438603206 1251.475531665467 1176.805329176567 1057.6518810634389 1177.7954857599836 0.9350240256126736 0.9914754707414661 0.9412981639174206 0.9079190754988604 0.9650031087962255 1.0642307877711024 0.9723722477347869 1.0625575889840846 0.9991593136538661 0.8979928127173785 1.0 10.201873333766796 -7.013707142698568 24.745305400078408 1.0069302663851254 0.9458028735673812 0.23581137991784185 0.045930218607632675 382.1915728246553 689966.1969582876 0.00443346834992134 0.007901211184243296 9.68931014157842e-08 7.013707142698568 -0.06112739281774415 VPAINVNDSVTK ddPTM_A549_MK2206_60min_R1 1 VPAINVNDSVTK 12 0 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 125.22 1.2084000000000002e-05 3197000.0 2281.4 2989.1 3201.5 2416.8 4066.2 2823.9 2505.2 2681.3 3958.0 3901.3 4118.8 False True 2666.444545125166 3141.2324225216344 3655.5208405947105 3008.9161084942743 3468.067366462569 3122.723223646888 2960.3624121659523 3061.382486136863 3061.5193196272185 3019.9936204294754 3095.988286902941 0.8612579564351429 1.0146137941832956 1.1807282527711032 0.9718758049644403 1.1201810359340332 1.0086353481558843 0.9561930271794854 0.9888223734849153 0.9888665705159357 0.9754538262321766 1.0 11.596184297985817 -7.514407184351932 24.68863955478687 0.9910498944862935 1.0371002371704994 0.07222842465017743 0.07672848946009841 725.3011647986676 2113746.8379381625 0.011003827077989243 0.016778319928871223 3.0590939537562945e-08 7.514407184351932 0.046050342684205825 VPAINVNDSVTK ddPTM_A549_PD325901_60min_R1 2 VPAINVNDSVTK 12 0 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ; 143.24 2.6355999999999998e-11 8560000.0 7029.4 7383.2 7892.2 7631.799999999999 9139.0 9328.1 8998.599999999999 8987.5 8558.0 8573.9 9189.0 False True 7743.019513229227 8005.408175342655 8427.812151653974 8103.198952924631 8497.10816783842 9252.135046321697 9341.046647222856 8808.237261942644 8198.337021246663 8032.542490769071 8058.811253870319 0.9608141038804663 0.9933733305266311 1.0457885023186813 1.0055079710463495 1.0543872911476373 1.1480769005327272 1.1591097437276163 1.0929946098082899 1.017313442762335 0.9967403674966786 1.0 12.976351328796389 -4.094621273474895 11.830763153020811 1.0322211423138528 0.6019156505112493 0.0 0.06305346770086231 14780062.283240812 0.0 0.00922450726088822 0.0 8.042271427995769e-05 4.094621273474895 -0.43030549180260347 VPAKLS(ph)PMK ddPTM_A549_MK2206_60min_R1 4 VPAKLSPMK 9 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 VPAKLS(1)PMK;VPAKLS(1)PMK;VPAKLS(1)PMK;VPAKLS(1)PMK 101.93 0.00019891 367938000.0 36353.2 37194.7 38296.7 34368.2 49487.100000000006 34933.1 34310.5 34485.0 50697.0 50961.7 52368.5 True False 42488.73140959242 39087.75135859132 43727.74792316209 42788.4105428471 42207.61314516495 38629.69745528495 40544.27372769436 39373.35435588323 39214.21044647325 39449.41657556223 39363.956152927225 1.079381636452535 0.992983307031873 1.1108575508336034 1.0869946703683955 1.0722401219326188 0.9813469282713935 1.0299847294357725 1.000238751484213 0.9961958674612831 1.0021710323602382 1.0 15.264587601125765 -7.2540442779663925 24.65646119210428 0.9999262565634481 1.0676781919100917 0.568185884348414 0.02898660050353238 258.42824284110804 861641.5594937152 0.0040852788740131565 0.006983895264351106 5.571289446314316e-08 7.2540442779663925 0.06775193534664359 VPAKLS(ph)PMK ddPTM_A549_PD325901_60min_R1 4 VPAKLSPMK 9 1 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;P35658-4;P35658-3 A0A494C1F2;P35658-4 NUP214 Nuclear pore complex protein Nup214 1 VPAKLS(1)PMK;VPAKLS(1)PMK;VPAKLS(1)PMK;VPAKLS(1)PMK 66.267 0.0015185 619867000.0 32995.100000000006 33434.3 34500.3 33733.0 40125.4 37654.9 36595.6 37718.1 39041.8 36149.700000000004 38969.0 True False 36344.738262291175 36251.925798686054 36841.697825157426 35816.61079679847 37307.1303291152 37348.2509788423 37988.2655838807 36965.78290622296 37401.00891751671 33867.20177265361 34176.060044844104 1.0634560629458587 1.0607403472231176 1.0779972231092645 1.0480029222151916 1.0916158937034481 1.0928190941213178 1.1115460803274106 1.0816279833813003 1.094362804502362 0.9909627302917531 1.0 15.060698466399712 -10.747933889488289 0.9405187542738945 0.9987635812989637 1.080849259810788 0.770952981228413 0.017656590422780193 0.24463731765791516 0.3750697177754272 0.013825523329282037 0.0033325833187424214 1.7867595437635484e-11 10.747933889488289 0.08208567851182424 VPAPFS(ph)PPPSKPR ddPTM_A549_PD325901_60min_R1 1 VPAPFSPPPSKPR 13 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 VPAPFS(1)PPPSKPR 121.13 2.6413e-06 27347000.0 5345.4 5346.1 4839.7 4811.2 5424.7 5562.7 5075.6 5259.8 5583.3 5546.6 5618.1 True False 5888.061072924501 5796.6346091395835 5168.151145480312 5108.376896972011 5043.687786199047 5517.399215507304 5268.754735474894 5154.8891627667235 5348.653317448759 5196.386729411325 4927.109316070176 1.1950335775421304 1.1764777757687208 1.0489215509434626 1.0367898435520024 1.0236606218069164 1.1198045063688455 1.0693399308780127 1.0462299153691648 1.0855560480470126 1.0546522100621716 1.0 12.266525765243134 -5.743635903619258 5.22096615487803 1.0476503160604531 1.189277995343298 0.7344719248035363 0.030449276563006052 0.07491943943492921 5.634059635158005 0.005264819091289375 0.020004435720145593 1.8045299578439563e-06 5.743635903619258 0.1416276792828448 VPAQANGT(ph)PTTK ddPTM_A549_MK2206_60min_R1 2 VPAQANGTPTTK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 VPAQANGT(0.911)PT(0.08)T(0.008)K;VPAQANGT(0.981)PT(0.017)T(0.001)K 188.48 2.0214000000000001e-19 31444000.0 7485.299999999999 7579.6 7609.5 7845.8 9776.7 7816.2 7354.3 7687.0 11368.1 10983.6 10023.0 True False 8748.63564198536 7965.369264910832 8688.641523193957 9768.02135221134 8338.560381116182 8643.305096026348 8690.481114398875 8776.655790450184 8793.243501125366 8502.397131558506 7534.012479272647 1.1612186289914368 1.0572545886836424 1.153255525803533 1.296523118203591 1.1067887668167504 1.1472379584989478 1.1534996973137317 1.1649377824361535 1.1671394924440432 1.1285350475526885 1.0 12.879202707616871 -10.6843574237355 0.765521810858232 0.9908650092874769 1.1570529358008124 0.12437492874354994 0.06580462450490143 0.47947487646393555 0.456516936750809 0.04911121559619083 0.010492787808404085 2.0684383263197824e-11 10.6843574237355 0.16618792651333547 VPAQANGT(ph)PTTK ddPTM_A549_PD325901_60min_R1 2 VPAQANGTPTTK 12 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 VPAQANGT(0.739)PT(0.216)T(0.045)K;VPAQANGT(0.995)PT(0.005)TK 154.23 1.1144000000000002e-13 50272000.0 9442.0 9140.8 10667.2 10611.6 11894.6 11626.099999999999 11248.7 13502.8 11610.3 12041.8 12178.099999999999 True False 10400.544889166977 9911.127295640394 11391.14033908457 11267.054431307832 11059.164330142346 11531.420896221167 11676.775434024832 13233.476061258327 11122.35946690583 11281.47869293356 10680.270903336388 0.9738090899845969 0.9279846349725339 1.066559120286557 1.0549408842979946 1.0354760127561555 1.0796936707493898 1.093303300984355 1.2390580895400647 1.0413930103056972 1.0562914363351366 1.0 13.382660620764359 -5.763418850683451 24.999629884307552 1.049243992257978 0.9508968460955429 0.30952831340796794 0.0625269735572964 53.55422977097245 676406.7082190277 0.009720383851450881 0.032584959102920384 1.7241742284131234e-06 5.763418850683451 -0.098347146162435 VPAQANGTPT(ph)TKSPAPGAPTR ddPTM_A549_MK2206_60min_R1 1 VPAQANGTPTTKSPAPGAPTR 21 1 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 1 VPAQANGT(0.001)PT(0.364)T(0.364)KS(0.271)PAPGAPTR 74.222 0.00011892 4448100.0 1581.3 1808.4 1711.7 1394.3 2368.8 1583.5 1834.7 1680.3 2327.6 2622.3 2366.2 True False 1848.1847809268104 1900.4398356990803 1954.4447986400025 1735.9035625925055 2020.3526579303857 1751.0649189577705 2168.041241258532 1918.4876707029334 1800.4023164134203 2029.9206087335547 1778.6072362022296 1.0391191170868876 1.068498877670707 1.0988625025574674 0.9759903857689756 1.1359183842321157 0.9845146715453217 1.2189544701773738 1.0786460504902609 1.0122540152584383 1.141297846661156 1.0 10.796532244989985 -8.784760258919526 6.198748564343289 1.005568057911511 1.0762075559861468 0.0 0.07557327925608162 0.18637162131153306 23.329041385419725 0.010242329254317001 0.011040055042170961 1.6414956685341736e-09 8.784760258919526 0.07063949807463588 VPAS(ph)PLPGLER ddPTM_A549_MK2206_60min_R1 2 VPASPLPGLER 11 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 VPAS(1)PLPGLER;VPAS(1)PLPGLER 135.1 5.0529999999999997e-08 490620000.0 4447.8 4688.700000000001 4305.5 4152.4 6037.5 4793.299999999999 4310.2 4216.9 6599.9 7181.5 7405.799999999999 True False 5198.479901730392 4927.334802943089 4916.084641318296 5169.73818640832 5149.391747827886 5300.523824464968 5093.307547867511 4814.658488714634 5105.033187874603 5559.194162231639 5566.735470318006 0.9338471226895614 0.8851390243376536 0.8831180621983927 0.928684004112197 0.9250290004410289 0.9521781397243526 0.9149541189850269 0.8648980204621778 0.9170604953468307 0.9986452907405826 1.0 12.442615813037767 -10.437160813543207 0.7611602847847144 1.0009654174993645 0.9109737184703987 0.6525909773712466 0.02444741925007965 0.3466870992553487 0.3601885300147463 0.01779325771827425 0.005098341115581201 3.654594417237128e-11 10.437160813543207 -0.08999169902896587 VPAS(ph)PLPGLER ddPTM_A549_PD325901_60min_R1 4 VPASPLPGLER 11 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER 106.26 0.00016035 757393000.0 8544.5 7781.199999999999 7560.200000000001 8334.0 9572.800000000001 9504.300000000001 8360.1 8627.5 9183.0 9109.1 9041.6 True False 9411.931349871556 8436.949032123772 8073.280635175784 8848.772252112722 8900.439552367176 9426.900131940622 8678.248180322253 8455.417744357179 8797.070444742712 8533.949871431269 7929.54051942473 1.1869453629520479 1.0639896487641447 1.018127168326959 1.1159249682167813 1.122440768234183 1.1888330867151584 1.0944200561260062 1.066318751211905 1.1094048164824712 1.076222493664789 1.0 12.953021555439678 -10.732379507214915 0.6174799722469418 0.9851900550794862 1.107341022973399 0.15180977221494218 0.05248738924787295 0.9159301610905703 0.5009587378696976 0.06221002753148392 0.010256731154378508 1.8519126266321313e-11 10.732379507214915 0.12215096789391289 VPASET(ph)SPGPPPMGPPPPSSK ddPTM_A549_PD325901_60min_R1 1 VPASETSPGPPPMGPPPPSSK 21 0 Q9HD15 Q9HD15 SRA1 Steroid receptor RNA activator 1 1 VPAS(0.007)ET(0.541)S(0.452)PGPPPMGPPPPSSK 106.16 8.3783e-12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VPASETS(ph)PGPPPMGPPPPSSK ddPTM_A549_PD325901_60min_R1 1 VPASETSPGPPPMGPPPPSSK 21 0 Q9HD15 Q9HD15 SRA1 Steroid receptor RNA activator 1 1 VPAS(0.003)ET(0.129)S(0.868)PGPPPMGPPPPSSK 136.26 7.756000000000001e-18 4328700.0 775.35 731.25 754.22 667.66 1213.6 858.61 944.76 997.94 873.04 1006.9 1042.9 True False 854.062961217498 792.8750038220986 805.4059046932996 708.8998418341235 1128.3609226927135 851.617764831238 980.7133587925085 978.0353038312151 836.3491648783811 943.3241621613713 914.6299114877957 0.9337798277646796 0.8668806845955401 0.8805811996495662 0.7750674157167915 1.233680320882191 0.9311064006707828 1.0722515702522972 1.06932354993757 0.914412654095165 1.0313725259945847 1.0 9.837044290692479 VPDEEENEES(ph)DNEK ddPTM_A549_MK2206_60min_R1 2 VPDEEENEESDNEK 14 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 VPDEEENEES(1)DNEK;VPDEEENEES(1)DNEK 207.4 1.0385999999999999e-32 16743600.0 3848.7000000000003 4555.3 3561.7 3512.7 6272.2 4918.200000000001 4195.0 5001.0 6340.8 4366.9 4933.4 True False 4498.266468319115 4787.145312740554 4066.8026168815195 4373.3116576910925 5349.567688733095 5438.640659563063 4957.177199040466 5709.907064920175 4904.618924176925 3380.414257056234 3708.3006250866706 1.2130263759869742 1.2909269761883635 1.0966755471143794 1.179330399511199 1.442592774853054 1.4666126642404973 1.336778675791585 1.539763800780505 1.3226055328408803 0.9115804242481627 1.0 11.856542489990467 -10.487407175280781 0.9367777580543686 1.0103841617984672 1.320636786056327 0.5321680484764624 0.128644965516158 0.3938712860061839 0.6484169862628403 0.07566515400442055 0.02487220231290857 3.255313540976029e-11 10.487407175280781 0.3102526242578598 VPDEEENEES(ph)DNEK ddPTM_A549_PD325901_60min_R1 2 VPDEEENEESDNEK 14 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 VPDEEENEES(1)DNEK;VPDEEENEES(1)DNEK 228.73 3.4718000000000005e-47 19649200.0 5467.700000000001 4997.0 5405.0 5445.8 6447.0 4903.4 4859.8 4648.6 5932.200000000001 5218.5 6355.0 True False 6022.776878892002 5418.114726973023 5771.815802905367 5782.174697690844 5994.184960942589 4863.468336117088 5044.7423483846005 4555.880026243848 5682.890263781196 4889.003019405219 5573.375287664147 1.0806336498140614 0.9721424535981327 1.035605087581387 1.037463726960724 1.0755035596131204 0.8726253096362747 0.9051503062337111 0.8174364350320394 1.0196496683723137 0.87720685707749 1.0 12.444335586368595 VPDEEENEES(ph)DNEKETEK ddPTM_A549_MK2206_60min_R1 5 VPDEEENEESDNEKETEK 18 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(0.999)DNEKET(0.001)EK;VPDEEENEES(0.991)DNEKET(0.009)EK;VPDEEENEES(0.996)DNEKET(0.004)EK 290.36 1.3132999999999996e-133 4928233500.0 43711.03 45465.420000000006 44262.45 42373.24999999999 61461.07 59062.280000000006 51361.17999999999 58682.91 62936.65 59661.31 60150.14 True False 51088.38323192011 47779.41567948995 50539.530979472554 52754.69815220749 52420.228019987124 65312.21126723157 60692.84157611754 67001.39220137474 48681.59926417797 46183.778634420654 45213.20017858894 1.1299439772041044 1.0567581036238234 1.1178047733813352 1.1667985885500292 1.1594009672602457 1.4445385641638495 1.342369956923755 1.4818989130768003 1.0767120900951292 1.0214667055638176 1.0 15.464456414401333 -8.976373721108459 24.09677457840977 1.0338432841969352 1.2357757640230211 0.33563357564183305 0.1295359499522702 100.66994216966835 102676.19421777727 0.025063075303242106 0.025882277493397124 1.0559084828688526e-09 8.976373721108459 0.20193247982608598 VPDEEENEES(ph)DNEKETEK ddPTM_A549_PD325901_60min_R1 6 VPDEEENEESDNEKETEK 18 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK 269.25 4.585899999999998e-101 7082321400.0 87152.9 87945.4 92799.3 84802.70000000001 104934.49999999999 79846.70000000001 90309.70000000001 86901.59999999999 85472.8 86046.2 97192.2 True False 96000.59824942602 95356.86750240812 99097.21854552376 90040.7701780946 97564.26272437251 79196.45494828903 93746.48505286427 85168.2794150137 81880.67545566855 80613.22824726361 85238.17555211822 1.1262629406084272 1.1187107992955914 1.1625919713043547 1.056343235819728 1.1446075903480313 0.9291195457352905 1.0998180621022762 0.9991799902256029 0.9606103711781494 0.945740892799533 1.0 16.379212093387096 -7.184126583847863 0.8246812595222895 0.9834500758964676 1.1369469514004464 0.5761554272096738 0.05312194650749132 0.3061177208784007 0.4044496453348706 0.00864230061080431 0.023213898058894122 6.544453950130697e-08 7.184126583847863 0.15349687550397884 VPDS(ph)PENELK ddPTM_A549_MK2206_60min_R1 2 VPDSPENELK 10 0 A0A2R8Y549;Q8NI35;A0A0X1KG69;A0A087WUZ6;Q8NI35-4;Q8NI35-3;Q8NI35-2;A0A0U1RR46 A0A2R8Y549 INADL InaD-like protein 1 VPDS(1)PENELK;VPDS(1)PENELK 169.98 1.9821e-10 37359000.0 8080.200000000001 9241.5 8340.4 7045.6 12388.4 9095.5 8720.8 9544.1 12586.3 12122.900000000001 13531.0 True False 9443.94021807678 9711.852876362 9523.194133654892 8771.772316289002 10566.082770814242 10057.979772895742 10305.25647613637 10897.005402580413 9735.523146191024 9384.328470280288 10170.879263398014 0.9285274137569135 0.9548685639512098 0.9363196521195617 0.8624399217731368 1.0388563758532114 0.9888997315199126 1.0132119563371418 1.0713926613793865 0.957195822904544 0.9226663916906094 1.0 13.312156783829586 -6.769597046516741 24.99998727616453 0.9930790617225445 0.9241182016821108 0.4357320374359386 0.04249380834807242 136.54713051873946 418463.57668984664 0.005743097822693315 0.010988957726900214 1.6998200730396624e-07 6.769597046516741 -0.06896086004043367 VPEASSEPFDTS(ph)SPQAGR ddPTM_A549_MK2206_60min_R1 2 VPEASSEPFDTSSPQAGR 18 0 H0Y6F5;Q9H4I2 H0Y6F5 ZHX3 Zinc fingers and homeoboxes protein 3 1 VPEASSEPFDT(0.016)S(0.635)S(0.349)PQAGR;VPEASSEPFDT(0.014)S(0.493)S(0.493)PQAGR 140.22 5.5187e-14 13038700.0 1885.0 2395.08 2125.64 2124.19 2682.54 2573.14 2060.85 2352.21 3245.2 3578.3999999999996 3323.6 True False 2203.141916174691 2516.9793417861943 2427.0877150091333 2644.616645358514 2287.9419195392497 2845.427966887904 2435.2797689255162 2685.642970841007 2510.167381519519 2770.0369546932648 2498.2583933064525 0.8818711155249341 1.0074935997532923 0.9715118826427219 1.0585841130141689 0.9158147634645397 1.1389646381301541 0.9747909885744109 1.075006083452621 1.0047669161224373 1.1087872103682248 1.0 11.286706986372893 -4.39628941520235 1.3794939706503206 1.0115334426491234 6.380785985090906e-13 0.27272502891515993 0.06353265598169609 10.151714269942302 2.7412129083674497 0.007038489375356655 25.271042868831 4.015231453911921e-05 4.39628941520235 -1.0115334426484852 VPEEAAQDRPMS(ph)PGDCPPETTETPK ddPTM_A549_MK2206_60min_R1 1 VPEEAAQDRPMSPGDCPPETTETPK 25 1 P13994 P13994 CCDC130 Coiled-coil domain-containing protein 130 1 VPEEAAQDRPMS(0.999)PGDCPPET(0.001)TETPK 47.159 0.0031031999999999995 4840700.0 1900.2 1636.7 1632.2 1950.1 2757.0 1731.2 1513.6 2064.1 2711.6 3120.1 3268.6 True False 2220.9073045703703 1720.0010390890748 1863.6705032074617 2427.874587543315 2351.448952175817 1914.3944349224446 1788.6015276442545 2356.6924960411366 2097.426929535414 2415.267242996441 2456.9164112292324 0.903940929540707 0.7000649396242716 0.7585404593699788 0.9881795638007126 0.9570732408431232 0.7791858225915973 0.7279863162904228 0.9592074379372344 0.8536826568251215 0.9830481948663635 1.0 11.262633060084413 -14.999999999999911 0.191310535960535 1.7112955805366972 0.8149126317056828 0.2684509898253339 0.09304180104577645 48.20411958780063 0.5541566951635065 12.778391017064726 0.09252309894915355 1.0000000000002046e-15 14.999999999999911 -0.8963829488310143 VPEEDLKR ddPTM_A549_PD325901_60min_R1 1 VPEEDLKR 8 1 Q99832-3;Q99832;Q99832-2;Q99832-4 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 57.96 0.015765 4425400.0 1683.4 1631.9 1396.6 1538.2 1849.3 1984.6 1563.6 1922.8 1876.3 1824.5 1762.9 False True 1854.297528746419 1769.4259401535478 1491.3816744380438 1633.2111204943365 1719.411547738658 1968.438075592033 1623.103653634751 1884.4482455925813 1797.4456360090105 1709.3007586288832 1546.0744759438448 1.199358476967554 1.1444635867708455 0.9646247303368667 1.0563599269674875 1.1121143091693528 1.27318451097923 1.049822423750888 1.2188599416869401 1.162586708451874 1.105574657123417 1.0 10.594394101652478 -10.808267789260576 1.083429362129632 1.0008385793079129 1.1299906658839654 0.06394864650428411 0.08733630778359268 0.5813426685873492 1.2238668437862803 0.055819400574579334 0.014275307345280317 1.555006507166436e-11 10.808267789260576 0.12915208657605248 VPEIEVTVEGPNNNNPQT(ph)SAVRTPTQTNGSNVPFKPR ddPTM_A549_MK2206_60min_R1 1 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPR 37 2 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 VPEIEVTVEGPNNNNPQT(0.293)S(0.293)AVRT(0.293)PT(0.08)QT(0.019)NGS(0.022)NVPFKPR 68.154 0.00013235 15623000.0 668.9 427.79 395.38 539.29 1092.5 678.76 555.19 576.02 786.18 774.7 700.62 True False 781.7939669651195 449.5626837611754 451.45082928450313 671.4160742096478 931.7946972259989 750.5859326755769 656.0608365042375 657.672598987266 608.1114852714827 599.6947319474832 526.6367178716955 1.4845033406037365 0.8536485750139099 0.8572338653274268 1.2749131449152487 1.7693310504282234 1.425244209535808 1.2457559722679146 1.2488164548137237 1.1547077228664426 1.1387256368508412 1.0 9.040664301444872 -9.426066855473834 0.9755166096167054 1.032272239547953 1.262996651564499 0.08453008322964728 0.24872566975790195 0.7668769780972747 1.5390246485791224 0.07487866948512592 0.0557733412716702 3.749152831877524e-10 9.426066855473834 0.23072441201654592 VPEIEVTVEGPNNNNPQTSAVRT(ph)PTQTNGSNVPFKPR ddPTM_A549_MK2206_60min_R1 1 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPR 37 2 P78347-2;P78347-4;P78347-3;P78347;A0A494C1K3 P78347-2 GTF2I General transcription factor II-I 1 VPEIEVTVEGPNNNNPQT(0.139)S(0.139)AVRT(0.618)PT(0.033)QT(0.033)NGS(0.038)NVPFKPR 74.949 6.269500000000001e-06 14461000.0 361.42 473.16 528.51 529.66 753.97 512.51 617.94 560.83 803.66 979.05 956.67 True False 422.4188601293668 497.2418229702373 603.4606651453104 659.4267237773408 643.0620117780196 566.7434680233953 730.2116992550812 640.329369969842 621.6322931813064 757.8819250202445 719.1024362511993 0.5874251550745769 0.6914756478401627 0.8391859556077313 0.9170136138253712 0.8942564777424604 0.788126196565156 1.015448790664368 0.8904564046646617 0.8644558297173613 1.0539276281293235 1.0 9.490053487205872 -4.642492155416942 0.6027702911084033 0.9317536239535075 4.957220460552377e-16 0.7220358914948682 0.07009425072846709 2.453275327559309 0.35746866472526373 0.011621353058601234 1.8836419183651567 2.2777593842435298e-05 4.642492155416942 -0.931753623953507 down VPEPEGQTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 VPEPEGQTSPK 11 0 Q504Q3-2;Q504Q3-3;Q504Q3 Q504Q3-2 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 1 VPEPEGQT(0.099)S(0.901)PK 118.76 1.5063e-05 20324000.0 6935.2 8466.2 7627.6 8496.2 10470.0 8517.0 7593.3 9092.0 10183.0 8724.6 10131.0 True False 7639.2563985756 9179.676386131485 8145.254804484907 9020.990977729803 9734.623319539147 8447.640375802346 7882.267186713192 8910.652927463985 9755.043922336381 8173.727267050447 8884.951225700315 0.8597972239260627 1.0331712749957094 0.9167472727283199 1.0153112547918084 1.0956304736238842 0.9507807258825441 0.8871480536565252 1.002892722887361 1.0979288095717694 0.9199518443508609 1.0 13.117148141204908 -8.528165624807878 24.656403686843554 1.046463461012302 0.9706228790710085 0.0 0.07680887746789206 147.16451904830868 686327.3447965148 0.011820944969619359 0.013425943273120819 2.9637009215423245e-09 8.528165624807878 -0.0758405819412935 VPEVVQTS(ph)SPR ddPTM_A549_MK2206_60min_R1 2 VPEVVQTSSPR 11 0 K7EKN5;A0A590UJ23;A0A590UJ36;A6NDB9 K7EKN5 PALM3 Paralemmin-3 1 VPEVVQT(0.188)S(0.406)S(0.406)PR;VPEVVQT(0.158)S(0.421)S(0.421)PR 56.086999999999996 0.015813 8906600.0 4256.3 5298.0 4675.5 4316.5 5750.4 4845.5 4454.4 4502.1 8377.5 7374.8 9196.2 True False 4974.659383455879 5567.6455704123655 5338.556204966599 5374.042693775048 4904.52377750882 5358.247593817415 5263.706821312477 5140.286462102999 6480.009626118506 5708.827557978959 6912.529737791797 0.7196582976357698 0.805442548763768 0.7723013726479818 0.7774350198299158 0.7095121415095086 0.7751500242412127 0.7614732986297379 0.7436187122639505 0.9374295477806568 0.8258666182321033 1.0 12.754998066515395 -8.837891885450544 3.844622963149068 0.9734707761003372 0.7594042251163918 0.6253076682189203 0.05243456031654772 0.0441387493255079 1.2347203897769417 0.0055907597354316425 0.005944238712993641 1.4524731555367225e-09 8.837891885450544 -0.21406655098394534 VPEVVQTS(ph)SPR ddPTM_A549_PD325901_60min_R1 1 VPEVVQTSSPR 11 0 K7EKN5;A0A590UJ23;A0A590UJ36;A6NDB9 K7EKN5 PALM3 Paralemmin-3 1 VPEVVQT(0.159)S(0.523)S(0.317)PR 62.338 0.007313600000000001 8568400.0 4472.5 4130.9 4657.0 4265.7 4957.8 4965.7 4485.2 4235.8 4949.5 4862.3 5862.9 True False 4926.5449075195165 4479.025440394811 4973.0520248159655 4529.182600892398 4609.58123148149 4925.260985572585 4655.886740395614 4151.313646079182 4741.489727349893 4555.293548194689 5141.800467985233 0.9581361505943341 0.871100593708934 0.9671810595879871 0.8808553791794874 0.8964916589397939 0.9578864477995784 0.9054973582473494 0.807365760676014 0.922145804154046 0.8859335512059725 1.0 12.328057910890923 -10.15493622530677 0.964851625256999 0.9928802844418262 0.9069787713069438 0.0 0.054405939555353854 0.38236772926141116 0.7085208412536245 0.017926831749771686 0.008237106543589865 6.99944773006519e-11 10.15493622530677 -0.08590151313488237 VPFAPGPS(ph)PPPLLGNMDQER ddPTM_A549_PD325901_60min_R1 1 VPFAPGPSPPPLLGNMDQER 20 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 VPFAPGPS(1)PPPLLGNMDQER 41.86 0.027485000000000002 2189200.0 1045.2 1177.2 1035.4 937.77 1536.6 1290.2 1028.8 1125.5 1223.0 1214.3 1045.7 True False 1151.3079345644278 1276.40677538376 1105.6684703659969 995.6939230698049 1428.6745169822213 1279.693038964446 1067.951546980962 1103.0510195623308 1171.601563097064 1137.6288907662654 917.0855292384578 1.2553986491537674 1.3918077809423952 1.205632882773908 1.0857154445525088 1.557842176583665 1.395391158365671 1.1645059407575458 1.202778786050956 1.2775270416380409 1.2404828715495548 1.0 9.840912478506803 -10.908654668916688 0.4372749055314724 0.9032083414256471 1.299103095162271 0.0746065355796125 0.1414468861476911 1.7126538442877723 0.37869852783027236 0.3084078084248724 0.033994687490438436 1.2340857316528122e-11 10.908654668916688 0.39589475373662397 VPFLVAET(ph)PR ddPTM_A549_MK2206_60min_R1 1 VPFLVAETPR 10 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 VPFLVAET(1)PR 94.363 0.00061441 3795900.0 2018.3 1547.5 1743.8 2046.7 2840.9 2664.8 2040.3 2628.4 4063.2 2578.2 2551.1 True False 2358.9396973025864 1626.2611400930805 1991.0970613240847 2548.141591879855 2423.007373317474 2946.7873672489213 2410.9960999290265 3000.983749137408 3142.891687597101 1995.7828293623343 1917.591463221835 1.2301575922429386 0.8480748748019159 1.0383322514268756 1.3288240173945096 1.263568085167873 1.5367128107140642 1.257304356100021 1.564975547030917 1.638978764703396 1.0407758209400486 1.0 10.905079676152813 -6.255480974908271 5.212044286171161 1.3393751472666082 1.016674510388478 0.27859721099584234 0.2068129092389491 0.19984851822097943 18.13557667283306 0.03565551331124538 0.09152092065873992 5.552889420698111e-07 6.255480974908271 -0.3227006368781302 VPFLVAET(ph)PR ddPTM_A549_PD325901_60min_R1 2 VPFLVAETPR 10 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 VPFLVAET(1)PR;VPFLVAET(1)PR 115.33 9.446e-05 14522100.0 4752.5 4784.0 4914.9 4824.9 5891.2 5085.6 5824.700000000001 5842.5 5045.0 5592.5 5979.6 True False 5234.970301394412 5187.164469449459 5248.454669694647 5122.923114857056 5477.422435536679 5044.184559725308 6046.362145898143 5725.966754147413 4832.976194460086 5239.388595577981 5244.1471078074865 0.998250086005518 0.9891340503638444 1.000821403709432 0.9768839450041453 1.0444829870203092 0.9618693861992402 1.152973404749901 1.0918775992425143 0.9215943212700404 0.9990926051211604 1.0 12.356492440993602 -8.775850387744544 24.985472127059317 0.9629751010734533 1.0258348012045109 0.14591360633642947 0.05598914345649195 289.9442046569141 502696.90955269354 0.01044642717208843 0.011146663516657962 1.6755199847871487e-09 8.775850387744544 0.06285970013105757 VPGEDGTLPPT(ph)QGSPLR ddPTM_A549_MK2206_60min_R1 1 VPGEDGTLPPTQGSPLR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VPGEDGTLPPT(0.672)QGS(0.328)PLR 140.93 3.9887e-16 8039900.0 2713.4 3227.6 2593.6 2582.8 3085.1 2566.0 2362.6 2441.5 3550.5 3330.6 3681.2 True False 3171.3555837392078 3391.8710538057667 2961.4114796709164 3215.586115946297 2631.2858768072574 2837.5324168270517 2791.8538380102527 2787.5901017801652 2746.317418983436 2578.2151467978388 2767.056444048536 1.14611163446277 1.2258047937912868 1.070238912560098 1.162096321837768 0.9509332136923706 1.0254696549216036 1.008961650932366 1.0074207585377573 0.9925050227617488 0.93175372419422 1.0 11.434136357854031 -6.7532443570977385 24.998528348872068 0.9977941974517305 1.150628511553985 0.7712939562259999 0.04246853401673612 55.70786028944231 169932.75046958745 0.004898060550603607 0.010060131313227005 1.765044433681788e-07 6.7532443570977385 0.15283431410225445 VPGEDGTLPPTQGS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 VPGEDGTLPPTQGSPLR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VPGEDGTLPPT(0.194)QGS(0.806)PLR 170.09 8.576599999999999e-30 8451500.0 2805.9 3399.0 3068.0 2974.6 4400.3 2920.4 3141.8 3303.8 4788.1 4144.6 5058.2 True False 3279.467322331333 3571.994581697174 3503.088533170255 3703.377133534867 3753.021699042162 3229.434789595374 3712.6243918820805 3772.1237674631598 3703.602995024529 3208.3319814502897 3802.1093407818926 0.86253892994485 0.9394770800995965 0.9213539693863341 0.9740322546256069 0.9870893661018081 0.8493797784708764 0.9764643936090986 0.9921134374024693 0.9740916588850371 0.8438294888148865 1.0 11.89258430616343 -2.000000000001009 0.1489527332727619 1.0096296118865775 0.5939077788239256 0.0 0.060597990043611355 47.95454909467576 0.4467155205842206 0.0703091629637467 4.338148870161026 0.009999999999976767 2.000000000001009 -0.41572183306265187 VPGEDGTLPPTQGS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 VPGEDGTLPPTQGSPLR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VPGEDGTLPPT(0.065)QGS(0.934)PLR;VPGEDGTLPPT(0.01)QGS(0.99)PLR 161.99 2.0037e-22 29919000.0 15923.8 14830.4 15326.1 15185.3 16887.2 17036.4 15363.099999999999 18226.3 15323.5 16657.3 20199.7 True False 17540.37245351801 16080.209855293328 16366.22130932615 16123.261492681468 15701.10132967732 16897.66120680042 15947.751177510894 17862.762148244245 14679.506583906663 15605.555235247395 17715.26495644839 0.9901275818701928 0.9077036044803891 0.9238485198816524 0.9101338045081041 0.8863034997375011 0.9538475009175429 0.9002265118087258 1.008325994116287 0.8286360164522006 0.8809100667482223 1.0 14.112705422679714 -5.253805515067365 22.959536472914436 0.9213953505949556 0.9901276857385206 0.14140436442579873 0.04957270636872564 578.3667038697675 1739346.8634047403 0.008433990460670256 0.11735349486476487 5.574353226767459e-06 5.253805515067365 0.06873233514356503 VPGGS(ph)PLGVSLVYSDKK ddPTM_A549_MK2206_60min_R1 2 VPGGSPLGVSLVYSDKK 17 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 VPGGS(1)PLGVSLVYSDKK;VPGGS(1)PLGVSLVYSDKK 140.97 1.5692e-16 13995400.0 3877.3 4334.9 4129.2 3973.3999999999996 5707.700000000001 4689.2 4376.0 3685.9 6872.1 6375.6 6425.6 True False 4531.693449116247 4555.52789414507 4714.782650315063 4946.883178372703 4868.104890944468 5185.408031560958 5171.0625561385195 4208.387612595332 5315.580322488689 4935.3475319534955 4829.946182461774 0.9382492636401365 0.943183986332362 0.9761563529289651 1.0242108279250697 1.007900441752592 1.0735954057604031 1.0706252949391835 0.8713114916014157 1.1005464909299243 1.0218224687211732 1.0 12.237791398624156 -6.102669565074449 1.4032428216375457 1.036805214008129 0.9335017659334297 0.20738505423866915 0.05740926681245534 0.48936884685029136 1.7072686613935608 0.009054882939181347 0.0452619296460924 7.89460553808894e-07 6.102669565074449 -0.10330344807469927 VPGGS(ph)PLGVSLVYSDKK ddPTM_A549_PD325901_60min_R1 2 VPGGSPLGVSLVYSDKK 17 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 VPGGS(1)PLGVSLVYSDKK;VPGGS(1)PLGVSLVYSDKK 121.21 3.2957e-10 39832000.0 8615.3 7026.200000000001 8067.900000000001 8061.0 8762.3 9652.7 8188.3 9287.8 9739.400000000001 8411.900000000001 9535.5 True False 9489.918913751351 7618.322532451046 8615.436210223903 8558.909662140708 8146.866276293966 9574.091611542486 8499.910237309687 9102.547542861847 9330.086887675836 7880.771198416164 8362.693950514791 1.1347920861276013 0.9109890398394977 1.0302225887022392 1.0234632180475574 0.9741916091276377 1.1448573471893138 1.0164081440271349 1.0884707244728848 1.1156795815900322 0.9423723079009773 1.0 13.029752050290757 VPGGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VPGGSPR 7 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 VPGGS(1)PR;VPGGS(1)PR 65.24600000000001 0.025169 252810000.0 5521.6 6287.200000000001 6711.0 5551.4 8244.0 6614.700000000001 6667.599999999999 6252.099999999999 9562.8 10478.900000000001 10378.2 True False 6453.511089840941 6607.191625197555 7662.720712550707 6911.493249211819 7031.318520760761 7314.663163517504 7879.016613187656 7138.354321253232 7396.841068653654 8111.709212087875 7801.006516251365 0.8272664657306377 0.8469665563582331 0.9822733382657 0.8859745514650608 0.901334783673471 0.9376563329718169 1.0100000040730357 0.915055551662767 0.9481906024875459 1.0398285394569589 1.0 12.929444562780928 -2.0000000000000004 0.1991960965850997 0.991529090753836 0.2774714667183766 0.5824537505909813 0.042029850095226765 26.320127671335516 0.2919135562161727 0.031104404481599957 5.9336129608109305 0.00999999999999999 2.0000000000000004 -0.7140576240354595 VPGGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VPGGSPR 7 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 VPGGS(1)PR;VPGGS(1)PR 56.659 0.037067 406570000.0 8055.5 7133.6 7450.799999999999 7635.2 9131.5 7236.5 7543.299999999999 7903.700000000001 8167.1 7649.799999999999 9459.7 True False 8873.288429854329 7734.773507371375 7956.456093300144 8106.808963202676 8490.134941964821 7177.568343253931 7830.364409352144 7746.054503167296 7823.865188855297 7166.790322476963 8296.216869979007 1.0695583985953325 0.932325375360028 0.9590463000179836 0.9771693640915139 1.0233742770982197 0.865161609893172 0.9438476033199404 0.9336851512642409 0.9430642076350512 0.8638624610225623 1.0 13.018237892549214 -5.251252048190223 24.376432849607546 0.9622073295370076 1.0695584833358074 0.29091196190346547 0.04945439304033077 878.6366607256305 2102358.4714680845 0.005682942145894049 0.1064573237662229 5.607224593474455e-06 5.251252048190223 0.10735115379879978 VPGGS(ph)PRT(ph)PNR ddPTM_A549_MK2206_60min_R1 2 VPGGSPRTPNR 11 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 2 VPGGS(1)PRT(1)PNR;VPGGS(1)PRT(1)PNR 53.376999999999995 0.011148 27195000.0 2239.91 2041.6799999999998 1806.9099999999999 1593.5 2208.0 1741.83 1956.7599999999998 1964.62 2351.6 3587.4 3432.6 True False 2617.952047458277 2145.592791279638 2063.157008302043 1983.907571534933 1883.2061249199123 1926.1492944668216 2312.2779632883016 2243.1109013964146 1818.9663547335451 2777.003848442494 2580.1906850594924 1.014635105311185 0.8315636529127948 0.7996141603985645 0.7688995945232587 0.7298709106363938 0.7465143198989611 0.8961655340736906 0.869358576629655 0.7049736150379151 1.0762785341884387 1.0 11.333261974428451 -11.015147859630977 1.2917451393431154 1.0003121471407237 0.8034656727839797 0.46002341161574567 0.08813505081260418 0.3671035427317155 1.088013474791844 0.06326902470427243 0.014227422751735518 9.657220338868106e-12 11.015147859630977 -0.19684647435674396 VPGPAEGPAEPAAEAS(ph)DEAER ddPTM_A549_MK2206_60min_R1 1 VPGPAEGPAEPAAEASDEAER 21 0 Q24JP5-4;Q24JP5;Q24JP5-2;H0YFQ2 Q24JP5-4 TMEM132A Transmembrane protein 132A 1 VPGPAEGPAEPAAEAS(1)DEAER 131.56 1.1917e-24 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VPGPAEGPAEPAAEAS(ph)DEAERR ddPTM_A549_MK2206_60min_R1 2 VPGPAEGPAEPAAEASDEAERR 22 1 Q24JP5-4;Q24JP5;Q24JP5-2;H0YFQ2 Q24JP5-4 TMEM132A Transmembrane protein 132A 1 VPGPAEGPAEPAAEAS(1)DEAERR;VPGPAEGPAEPAAEAS(1)DEAERR 150.91 1.0016000000000002e-27 73146000.0 5634.8 6358.0 6492.700000000001 5081.5 7747.6 6563.0 5715.4 6105.200000000001 9111.1 8308.5 9096.2 True False 6585.816482366652 6681.5950427863045 7413.462489998216 6326.4677281172035 6607.938303183663 7257.49230383318 6753.814198664097 6970.630796390847 7047.450397436982 6431.604079496142 6837.362497651389 0.9632100805871939 0.9772181956246154 1.0842576348035833 0.9252789698206471 0.9664455124989303 1.0614461799160282 0.9877806246171691 1.0194911852026618 1.0307264533448033 0.940655710693323 1.0 12.739224199631101 -7.215426775221785 24.999319404225105 1.0159688361758907 0.9853325586116073 0.0393398010089836 0.04604800395330588 719.1285043181946 390713.05609805847 0.005710852341978475 0.009891445784856966 6.089382079140739e-08 7.215426775221785 -0.030636277564283443 VPGPAEGPAEPAAEAS(ph)DEAERR ddPTM_A549_PD325901_60min_R1 2 VPGPAEGPAEPAAEASDEAERR 22 1 Q24JP5-4;Q24JP5;Q24JP5-2;H0YFQ2 Q24JP5-4 TMEM132A Transmembrane protein 132A 1 VPGPAEGPAEPAAEAS(1)DEAERR;VPGPAEGPAEPAAEAS(1)DEAERR 119.14 1.8731e-15 92385000.0 10962.6 11432.3 11010.0 11031.0 11676.0 12397.400000000001 12389.2 12232.4 11516.1 12054.099999999999 14054.7 True False 12075.515081760423 12395.740042660342 11757.204808508426 11712.35981678131 10855.91804001329 12296.439684744872 12860.677785630376 11988.415185867838 11032.11836531651 11293.002068834418 12326.061000083917 0.9796734805773079 1.0056529853759404 0.9538493123170803 0.9502110866319395 0.8807288914065395 0.9975968547179148 1.043372881696985 0.9726071602100801 0.8950238332620131 0.9161890460186376 1.0 13.589424215497703 VPHLEEVMS(ph)PVTTPTDEDVGHR ddPTM_A549_MK2206_60min_R1 2 VPHLEEVMSPVTTPTDEDVGHR 22 0 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 VPHLEEVMS(0.85)PVT(0.124)T(0.025)PT(0.001)DEDVGHR;VPHLEEVMS(0.953)PVT(0.022)T(0.023)PT(0.003)DEDVGHR 79.445 0.00014716 5231500.0 932.49 1001.8399999999999 561.99 797.75 690.8 591.77 608.07 544.94 1015.59 1066.84 748.55 True False 1089.8715148083484 1052.8293767953812 641.6886325802974 993.1987858123582 589.1842350972269 654.3907086148656 718.5484480144306 622.1869138087584 785.5604865639733 825.8401030474412 562.6643760709907 1.936983326399254 1.8711498747213153 1.1404465252645324 1.7651709048078201 1.0471326427512984 1.1630213968483087 1.2770462794036426 1.105786931373558 1.3961439891564418 1.467731276705611 1.0 9.136130814814674 -2.000000015934161 0.4070425091227775 1.1660523265417053 15.804696179587634 0.5082079398859176 0.2270654699008213 32.514443741317535 0.3741569691958298 0.04665697398113535 388.4559482205549 0.009999999633102389 2.000000015934161 14.638643853045927 VPHLEEVMS(ph)PVTTPTDEDVGHR ddPTM_A549_PD325901_60min_R1 1 VPHLEEVMSPVTTPTDEDVGHR 22 0 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 VPHLEEVMS(0.837)PVT(0.125)T(0.035)PT(0.003)DEDVGHR 56.468 0.0059339 3769800.0 383.86 400.94 343.3 263.45 466.16 382.48 496.75 321.88 231.44 390.04 370.48 True False 422.82918461720334 434.7286208990525 366.59840243060336 279.7227081616387 433.41852976469613 379.3652096908399 515.65409308203 315.45985089002505 221.71338165427997 365.41280783535706 324.91330866621774 1.3013600038512865 1.3379834229740575 1.128296048984588 0.8609148985306626 1.3339512977904682 1.167589013968524 1.5870513128526835 0.9709046766505209 0.6823770394768449 1.1246470922825273 1.0 8.343911028405243 -8.509257973390445 24.410386883268874 0.8487813368976382 1.2335046126727782 0.32489052170498045 0.19805903023882845 320.04944212086644 573575.6080431766 0.03264321325370686 0.03861137979605774 3.0955799608922954e-09 8.509257973390445 0.38472327577514 VPHLEEVMSPVT(ph)TPTDEDVGHR ddPTM_A549_MK2206_60min_R1 1 VPHLEEVMSPVTTPTDEDVGHR 22 0 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 VPHLEEVMSPVT(0.904)T(0.084)PT(0.011)DEDVGHR 111.95 5.6178e-11 15776000.0 375.19 374.96 447.43 527.7 591.85 490.05 450.43 263.21 463.27 664.42 764.47 True False 438.5128994851891 394.04386241634984 510.88230195448733 656.9865236893532 504.7896490189544 541.906765731137 532.2673005396415 300.52082354681846 358.34008469017255 514.3270605402693 574.6310007013433 0.7631208531213586 0.6857337351020308 0.8890615043931671 1.1433189697170778 0.8784587820755463 0.9430517411516852 0.9262766886749993 0.5229805269469096 0.623600335263525 0.8950562359366752 1.0 9.166492016532475 VPHLEEVMSPVT(ph)TPTDEDVGHR ddPTM_A549_PD325901_60min_R1 2 VPHLEEVMSPVTTPTDEDVGHR 22 0 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 VPHLEEVMSPVT(0.476)T(0.307)PT(0.217)DEDVGHR;VPHLEEVMSPVT(0.479)T(0.31)PT(0.21)DEDVGHR 105.79 2.5766e-10 52389100.0 2184.3599999999997 2016.79 2261.83 2361.24 2542.49 2763.06 1890.3600000000001 2612.16 2968.71 2966.29 3261.8 True False 2406.114619159158 2186.75197122512 2415.3313852887036 2507.0884320348764 2363.914273514334 2740.558555449623 1962.2986842446826 2560.0584196001214 2843.9454426671177 2778.997943169782 2860.619278253805 0.841116690169239 0.7644330679893793 0.8443386380179482 0.8764145760652452 0.8263645188594715 0.9580298141325991 0.6859698874163079 0.8949315412440506 0.994171249661414 0.971467249869809 1.0 11.482111785844811 -8.635466138343276 4.03849451890505 0.9972546658836071 0.8306398729876078 0.5422386709512683 0.06410254292220212 0.10632509172798883 3.2099332223557555 0.010152141679410887 0.01150410108626041 2.3149086708941213e-09 8.635466138343276 -0.16661479289599934 VPHLEEVMSPVTT(ph)PTDEDVGHR ddPTM_A549_PD325901_60min_R1 2 VPHLEEVMSPVTTPTDEDVGHR 22 0 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 VPHLEEVMSPVT(0.005)T(0.497)PT(0.497)DEDVGHR;VPHLEEVMSPVT(0.323)T(0.602)PT(0.075)DEDVGHR 129.15 3.3289999999999996e-22 27081000.0 3014.52 2918.0 2867.6899999999996 2812.3 3493.05 3078.0 2871.72 3117.5 2956.9900000000002 2931.5699999999997 3369.5 True False 3320.5518512276662 3163.910100721891 3062.308688220847 2986.0093838032917 3247.710218368313 3052.933788507646 2981.0048760654795 3055.3190168685614 2832.7179935097197 2746.4701698951326 2955.0728610203546 1.1236785038461339 1.0706707582260517 1.0362887252680006 1.010468954316157 1.0990288128621348 1.0331162485968286 1.0087754232348 1.033923412573182 0.9585949743830049 0.929408613277578 1.0 11.528977986955535 -7.9489152790863 1.0707619144177727 0.9815776948106002 1.0648660942430355 0.5601865328161098 0.03585155641632956 0.27582950249289523 0.6334500641288118 0.006283185176292497 0.009605794446992702 1.1248243800583147e-08 7.9489152790863 0.08328839943243527 VPHLEEVMSPVTTPT(ph)DEDVGHR ddPTM_A549_MK2206_60min_R1 5 VPHLEEVMSPVTTPTDEDVGHR 22 0 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 VPHLEEVMSPVT(0.26)T(0.26)PT(0.481)DEDVGHR;VPHLEEVMS(0.002)PVT(0.135)T(0.135)PT(0.728)DEDVGHR;VPHLEEVMSPVT(0.036)T(0.027)PT(0.938)DEDVGHR;VPHLEEVMSPVT(0.058)T(0.226)PT(0.715)DEDVGHR;VPHLEEVMS(0.001)PVT(0.051)T(0.068)PT(0.88)DEDVGHR 98.7 1.3457000000000002e-07 46042000.0 6708.14 6811.589999999999 7342.79 7172.860000000001 9136.01 6868.03 6691.349999999999 7051.839999999999 10506.48 11040.029999999999 10857.62 True False 7840.310033723122 7158.270836346772 8384.108034705743 8930.211022001919 7792.115031399266 7594.800375970658 7907.081680762677 8051.45991535426 8126.779055400956 8546.079555366166 8161.373298932487 0.9606606322919501 0.877091461713077 1.0272913304679239 1.094204454925496 0.9547553758407888 0.9305787271076135 0.9688420552699052 0.9865324891348122 0.995761222742249 1.0471374414994592 1.0 12.994596216866146 VPHLEEVMSPVTTPT(ph)DEDVGHR ddPTM_A549_PD325901_60min_R1 3 VPHLEEVMSPVTTPTDEDVGHR 22 0 J3KNL5;A0A1B0GWG7;A0A1B0GUD6;Q3KR37;Q3KR37-4;A0A024R3M2;A0A2R8Y5X2;Q3KR37-2;Q3KR37-3 J3KNL5 GRAMD1B;hCG_39893 GRAM domain-containing protein 1B 1 VPHLEEVMSPVT(0.052)T(0.052)PT(0.896)DEDVGHR;VPHLEEVMSPVT(0.007)T(0.463)PT(0.53)DEDVGHR;VPHLEEVMSPVT(0.02)T(0.096)PT(0.883)DEDVGHR 124.0 5.2671e-16 34848300.0 4821.76 5209.82 4805.39 5427.610000000001 5418.26 5523.88 5616.42 5970.52 5743.049999999999 6574.17 5329.200000000001 True False 5311.261525607899 5648.869815264882 5131.512662557523 5762.86114270333 5037.700109582251 5478.8953527165795 5830.155936522948 5851.433294817673 5501.6895804943515 6159.075784245132 4673.742184582188 1.1364044732995262 1.2086395851913825 1.0979451711062358 1.2330293189286188 1.0778729143855414 1.1722716265331115 1.247427801164462 1.2519803326166494 1.1771487093668558 1.317803922638862 1.0 12.190362438277182 -10.492962170981423 0.8704059771788552 1.0026032105734943 1.178126466999223 0.0 0.10767471476011191 0.3177276992867298 0.4420060992538971 0.03388257126671408 0.010349067340631807 3.213940475236494e-11 10.492962170981423 0.17552325642572875 VPKPEPIPEPKEPS(ph)PEK ddPTM_A549_MK2206_60min_R1 6 VPKPEPIPEPKEPSPEK 17 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK 177.93 7.7138e-31 1292856200.0 36007.8 35293.0 37821.65 32338.8 45183.9 31478.699999999997 33258.28 34586.6 48749.100000000006 50666.3 55491.600000000006 True False 42085.0363338117 37089.26295140877 43185.328689888796 40261.80745174388 38537.40816475039 34809.75514013007 39300.87897385066 39489.35646702018 37707.506686316134 39220.74764072643 41711.504229752216 1.0089551338643177 0.88918545701724 1.0353337643259894 0.9652446775828745 0.9239035819106761 0.834536077826241 0.9422071847943069 0.9467257821609079 0.9040073567862343 0.9402861000814935 1.0 15.34815772020317 -4.706015761137159 6.651337367076146 0.9458670431762138 6.703655899501225 0.11940804286573614 0.05152215874501801 11995.449586921697 3242.6643803784737 0.007694629374607948 1033693.6238783463 1.9678148737340048e-05 4.706015761137159 5.7577888563250115 VPKPEPIPEPKEPS(ph)PEK ddPTM_A549_PD325901_60min_R1 8 VPKPEPIPEPKEPSPEK 17 2 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK 151.82 2.0656e-17 2477417000.0 66054.9 61472.8 70724.0 65709.2 79181.5 76107.4 72714.40000000001 76603.70000000001 85499.7 73421.69999999998 79284.9 True False 72760.74482095275 66653.3285948104 75523.75593796112 69767.90804757926 73620.06460134567 75487.60656772803 75481.58628284662 75075.77910905973 81906.44494221594 68785.84133177421 69533.35992839071 1.0464149135880356 0.9585805815144511 1.0861513957579447 1.0033731739618235 1.0587732949646569 1.0856315104788454 1.0855449292337047 1.0797087784392543 1.1779445869805185 0.9892494969697087 1.0 16.08541768337415 -7.000339576075541 3.466187311712895 1.0857226009514724 1.0234322149421553 0.09308219256100547 0.055872036957199056 0.354508856034539 9.060070959571004 0.009922201528268506 0.01884272855765273 9.992184027968661e-08 7.000339576075541 -0.062290386009317134 VPKPEPIPEPKEPS(ph)PEKNSK ddPTM_A549_MK2206_60min_R1 1 VPKPEPIPEPKEPSPEKNSK 20 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(0.992)PEKNS(0.008)K 79.237 4.2165e-05 8418100.0 1282.9 1109.5 1618.4 1403.3 1845.4 1631.5 1158.4 1142.2 2354.6 2005.7 1965.2 True False 1499.4221561063719 1165.9688109423407 1847.9134556984156 1747.1085629965305 1573.9441045865983 1804.1442470979498 1368.8662854275276 1304.1103478407965 1821.2868595235607 1552.6109769808534 1477.1866032392109 1.0150526364227799 0.7893172117764783 1.2509681929461491 1.1827270563958732 1.0655012042048142 1.2213380781695273 0.9266712021526896 0.8828338579439534 1.2329429846776288 1.0510594758822278 1.0 10.5286363684244 -5.754886928420644 24.999992833065996 1.101036065743071 0.9021849538064048 0.24201714978238764 0.1273818198549427 163.0406838786616 622041.5836936733 0.018515287092480907 0.06847308455797739 1.7583813611456278e-06 5.754886928420644 -0.19885111193666605 VPKPEPIPEPKEPS(ph)PEKNSK ddPTM_A549_PD325901_60min_R1 2 VPKPEPIPEPKEPSPEKNSK 20 3 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(0.923)PEKNS(0.077)K;VPKPEPIPEPKEPS(0.996)PEKNS(0.004)K 75.896 6.0412e-05 23817000.0 3075.9 2904.7 3649.1000000000004 3100.2 3926.8999999999996 4093.7000000000003 3654.6 4811.9 3459.9 4435.2 4690.6 True False 3388.163103642099 3149.4892630455365 3896.7498698208997 3291.6923129349493 3651.0880910695605 4060.3622644619118 3793.6778028738527 4715.922879637474 3314.4924351263526 4155.16071508403 4113.685936163253 0.8236319340416557 0.7656124730763957 0.9472647961684977 0.8001807537123362 0.8875466303766621 0.987037495684205 0.9222089050415294 1.1463983767404262 0.8057232580612872 1.0100821452012594 1.0 12.00621593860381 -6.993647850440874 8.094764203416482 0.9322811357032774 0.8379880496090015 0.2876809389910676 0.09264720039897269 0.19090338075348234 101.72280487075558 0.01486543419445683 0.02755943821243972 1.0147338535750616e-07 6.993647850440874 -0.09429308609427589 VPKS(ph)PEHSAEPIR ddPTM_A549_MK2206_60min_R1 3 VPKSPEHSAEPIR 13 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 VPKS(0.964)PEHS(0.036)AEPIR;VPKS(0.798)PEHS(0.202)AEPIR;VPKS(0.999)PEHS(0.001)AEPIR 152.59 8.3475e-14 526290000.0 12424.5 12726.7 10948.5 11012.9 14461.2 10794.8 10954.2 11381.2 16341.599999999999 17029.5 16976.199999999997 True False 14521.451850139232 13374.434669869208 12501.16193136067 13711.060994387863 12333.97663663581 11937.098570991688 12944.436346538521 12994.519953463205 12640.253692172864 13182.52412249859 12760.541020715182 1.1379965650802286 1.048108747752736 0.979673347005159 1.074489002631599 0.9665716066907433 0.9354696287260285 1.0144112483573233 1.0183361295080033 0.9905734930558943 1.0330693738688954 1.0 13.639401877253814 -4.191383962729325 0.9352703523368001 0.9950373434346358 1.970881244016349 0.559633940204634 0.03507911823274913 5.859434085056644 0.8432072717797429 0.004749032365447224 9.29050895350948 6.436000027322349e-05 4.191383962729325 0.9758439005817132 VPKS(ph)PEHSAEPIR ddPTM_A549_PD325901_60min_R1 4 VPKSPEHSAEPIR 13 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 VPKS(0.934)PEHS(0.066)AEPIR;VPKS(0.989)PEHS(0.011)AEPIR;VPKS(0.977)PEHS(0.023)AEPIR;VPKS(0.561)PEHS(0.439)AEPIR 148.97 3.4701e-13 838439000.0 20294.7 21064.2 21355.4 23664.9 23918.9 26225.6 23349.5 23616.9 23699.4 25295.1 29154.7 True False 22355.003003831505 22839.354058816345 22804.7058644524 25126.627126112617 22238.918979725397 26012.02740866996 24238.077999836652 23145.842402400365 22703.396634883513 23697.96306911121 25568.856726870486 0.8743059278179802 0.8932489357185185 0.8918938421085828 0.98270436549112 0.869765872494188 1.0173324402625223 0.9479531391939277 0.905235718970424 0.8879316301625781 0.9268292017220644 1.0 14.642100033623384 VPKSPEHS(ph)AEPIR ddPTM_A549_MK2206_60min_R1 1 VPKSPEHSAEPIR 13 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 VPKS(0.154)PEHS(0.846)AEPIR 156.5 9.434399999999999e-19 61896000.0 1677.0 1808.2 1701.5 1280.6 1891.4 1427.7 1547.4 1430.8 1923.3 2243.8 2175.3 True False 1960.036601286449 1900.2296565533497 1942.7982852637524 1594.3470574883193 1613.1775655224285 1578.7782663694406 1828.5425501299685 1633.6202816412285 1487.6756208789877 1736.9240216132207 1635.1129747741986 1.1987163159518814 1.1621396722240325 1.1881737318683094 0.9750684399703274 0.986584774513945 0.9655469014839555 1.1182973765971624 0.9990871009184082 0.9098304788905663 1.062265451017586 1.0 10.675174603881278 -6.262779558247659 24.115051790196 0.9746467558647178 1.1809228993993133 0.6532801443500926 0.056166389496836104 28.561666022523845 513948.00882180553 0.00814457411495511 0.019941800145346404 5.460349503998162e-07 6.262779558247659 0.20627614353459545 VPLAPITDPQQLQLS(ph)PLK ddPTM_A549_MK2206_60min_R1 2 VPLAPITDPQQLQLSPLK 18 0 A0A286YFD6;P31350;P31350-2 A0A286YFD6 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 VPLAPIT(0.001)DPQQLQLS(0.999)PLK;VPLAPITDPQQLQLS(1)PLK 319.32 6.588399999999997e-173 622820000.0 46629.0 49340.0 47596.0 40832.0 65639.0 55300.0 47666.0 48386.0 66538.0 63096.0 64326.0 True False 54498.835230402976 51851.195251820754 54345.82849568822 50835.84183301813 55983.59005145747 61151.80929483086 56326.29520130224 55244.86367591031 51467.24923935223 48842.56977792486 48352.078892716025 1.1271249650159907 1.0723674439493822 1.1239605357252824 1.0513682761358223 1.1578321208416766 1.264719339793331 1.1649198233291989 1.142554052298104 1.0644268130342063 1.0101441529804156 1.0 15.561290299111663 -9.099170907296887 1.54466650071096 1.020626641783452 1.1382972003442533 0.4802423075977409 0.05311497629836746 0.23806680339277436 1.1645917368344756 0.012371354057882054 0.011669147842870044 7.958461005878971e-10 9.099170907296887 0.11767055856080133 VPLAPITDPQQLQLS(ph)PLK ddPTM_A549_PD325901_60min_R1 4 VPLAPITDPQQLQLSPLK 18 0 A0A286YFD6;P31350;P31350-2 A0A286YFD6 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK 327.02 1.2146999999999996e-173 1308675000.0 81825.11 79165.61 81029.56 81560.42 96275.3 78773.37 87481.24 87323.75 82271.93 82168.28 93643.49 True False 90131.93493073783 85837.17378643244 86528.71321192771 86598.22190624678 89513.25505975423 78131.86579194762 90810.38645977122 85582.00930209337 78814.32689044329 76980.16077787358 82125.9343849921 1.0974844378417052 1.0451896155487583 1.0536100911351114 1.0544564583008502 1.0899511309074628 0.9513665369781855 1.1057455496830992 1.042082625214342 0.9596764710277198 0.9373428911871368 1.0 16.32555025929097 -8.670974298334643 5.994518620536481 0.9810511545694963 1.054640219380122 0.46629973493004495 0.04180900648345385 0.1438058247560862 7.7839391468811865 0.006469704924134897 0.007323068058898067 2.133171151059051e-09 8.670974298334643 0.07358906481062577 VPLAPITDPQQLQLS(ph)PLKGLSLVDKENTPPALSGTR ddPTM_A549_MK2206_60min_R1 1 VPLAPITDPQQLQLSPLKGLSLVDKENTPPALSGTR 36 2 A0A286YFD6;P31350;P31350-2 A0A286YFD6 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 VPLAPITDPQQLQLS(1)PLKGLSLVDKENTPPALSGTR 263.55 3.221499999999999e-169 65919000.0 9943.5 11133.0 12456.0 10556.0 15466.0 11773.0 10542.0 9318.6 20616.0 15460.0 17220.0 True False 11621.719704765528 11699.62214711229 14222.44809946829 13142.220473876854 13190.971887686315 13018.81104571508 12457.344942141732 10639.540087015619 15946.508916987046 11967.575262563687 12943.798752177503 0.8978600430426528 0.9038785576872548 1.0987847054618092 1.0153294813600198 1.0190958728763633 1.0057952302082074 0.9624180026783917 0.821979721001592 1.2319805972187574 0.9245798309828026 1.0 13.659973461844952 -8.768722762641008 24.99975000324452 1.1095463793757017 0.9726908880294185 0.05003124424508143 0.1023916085603328 169.89350633923036 583147.3974932362 0.018489512775989047 0.01987795257545508 1.7032454496374758e-09 8.768722762641008 -0.13685549134628316 VPLDLS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VPLDLSPR 8 0 Q9UKV5;R4GNG2 Q9UKV5 AMFR E3 ubiquitin-protein ligase AMFR 1 VPLDLS(1)PR;VPLDLS(1)PR 54.982 0.021818 11025900.0 913.34 747.3 842.38 736.04 926.12 688.3399999999999 905.6200000000001 801.8599999999999 1137.55 1133.08 872.8399999999999 True False 1067.4894629808969 785.3343780236246 961.8421507731294 916.3698330420912 789.8889748237451 761.1796819168878 1070.1594314648457 915.526110593259 879.896741294074 877.1164410417636 656.0897388414985 1.6270479475350954 1.1969923190847978 1.466022243346647 1.3967141669677483 1.203934352362384 1.16017617233422 1.6311174647457491 1.3954281806172806 1.341122546509821 1.3368848636324455 1.0 9.357749347494831 -10.420134553339786 0.6909493612092215 0.9876127558639937 1.376432773557133 0.06693459914742583 0.17863776568154993 0.5301828291883635 0.44240020029778626 0.1128390006792387 0.03011403862075365 3.8007162409129104e-11 10.420134553339786 0.38882001769313923 VPLDLS(ph)PR ddPTM_A549_PD325901_60min_R1 3 VPLDLSPR 8 0 Q9UKV5;R4GNG2 Q9UKV5 AMFR E3 ubiquitin-protein ligase AMFR 1 VPLDLS(1)PR;VPLDLS(1)PR;VPLDLS(1)PR 57.59 0.016378 8904500.0 956.36 913.46 989.47 768.66 976.8299999999999 988.01 847.29 836.8 1231.17 1384.19 1478.44 True False 1053.4489631649787 990.4404799881486 1056.6213843664705 816.1383824464807 908.2208306805566 979.9639741336711 879.5340846048778 820.1093675430991 1179.4282064090044 1296.7920071726567 1296.6012526033346 0.8124694936472171 0.7638743815799406 0.8149162144066813 0.6294443884022373 0.7004627126936811 0.7557944064654305 0.6783381419992743 0.6325069992771268 0.9096306239415791 1.0001471189148854 1.0 10.340519156433658 -8.905673276853431 4.908948067139836 0.9612672507845955 0.7239158622159418 0.7604077187453475 0.06202294191533118 0.07832394307082771 3.0928729600769618 0.011769815237823972 0.012396560122650762 1.2425867638217465e-09 8.905673276853431 -0.23735138856865368 VPLSNENSQVPQS(ph)PEDWRK ddPTM_A549_MK2206_60min_R1 2 VPLSNENSQVPQSPEDWRK 19 1 Q8IZT6;Q8IZT6-2 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 VPLSNENS(0.001)QVPQS(0.999)PEDWRK;VPLSNENSQVPQS(1)PEDWRK 133.41 4.9915e-17 24524000.0 4011.9 4653.1 2906.8999999999996 3235.5 5562.700000000001 4043.0 3659.3 4207.5 6363.700000000001 5741.9 7576.099999999999 True False 4689.010638462194 4889.922915002978 3319.142130727708 4028.1976452471167 4744.434198864135 4470.827576473801 4324.14744325358 4803.926009928339 4922.332110740713 4444.80080207726 5694.745280277116 0.8233925149737371 0.8586728070065719 0.5828429486079126 0.7073534367196662 0.8331249187379393 0.7850794647405622 0.7593223630615414 0.8435717092678414 0.8643638773078159 0.7805091506851328 1.0 12.475415597868617 -9.389255324374899 0.4506324710583625 1.003590547739845 0.7475358934237586 0.09567469640765536 0.09465975555321486 0.48270547550167897 0.2306781151349476 0.048018155293079574 0.02641856474684487 4.0807940342553443e-10 9.389255324374899 -0.2560546543160864 VPLSNENSQVPQS(ph)PEDWRK ddPTM_A549_PD325901_60min_R1 2 VPLSNENSQVPQSPEDWRK 19 1 Q8IZT6;Q8IZT6-2 Q8IZT6 ASPM Abnormal spindle-like microcephaly-associated protein 1 VPLSNENSQVPQS(1)PEDWRK;VPLSNENSQVPQS(1)PEDWRK 123.43 8.604600000000001e-15 33337000.0 6894.6 6363.9 6472.1 7366.6 6484.2 7102.2 6302.1 5965.3 8169.8 7841.1 8050.799999999999 True False 7594.534716463744 6900.208187108995 6911.335625898946 7821.618151237538 6028.772161275616 7044.362037926909 6541.929864141445 5846.317411812677 7826.451717244801 7346.0116078295005 7060.602638226046 1.0756213181219112 0.9772831783155906 0.9788591682643392 1.1077833652458162 0.8538608487377397 0.997699828027255 0.9265398719258735 0.8280196056014768 1.108467947887685 1.0404227491939926 1.0 12.785575610662155 VPLSVQLKPEVS(ph)PTQDIR ddPTM_A549_MK2206_60min_R1 2 VPLSVQLKPEVSPTQDIR 18 1 A6PVJ6;A6PVJ7;Q5JWR1;H0Y4S7;B4DML5;G3XAG9;Q9BYM8 A6PVJ6 RBCK1 RanBP-type and C3HC4-type zinc finger-containing protein 1 1 VPLSVQLKPEVS(0.987)PT(0.012)QDIR;VPLSVQLKPEVS(0.962)PT(0.038)QDIR 91.729 1.4103e-06 10099400.0 3389.1000000000004 4215.9 4150.200000000001 3746.8 5637.299999999999 3618.7 4031.8 3727.1000000000004 5835.5 5202.6 5939.0 True False 3961.0972244602863 4430.471302435166 4738.760766089698 4664.766168200245 4808.060637686152 4001.628432101348 4764.3258715354805 4255.427838765042 4513.768567378635 4027.3290466373783 4464.182391938568 0.8873063142790146 0.9924485411787212 1.0615069793400387 1.0449318057935741 1.0770305098574289 0.8963855149215003 1.067233695500191 0.9532378978174155 1.0111075603742379 0.9021425858204045 1.0 12.124180256849295 -5.279948894518057 4.261029679848229 1.009446423667756 0.879820721613909 0.2199096565084564 0.05990377755325992 0.15834691286097555 6.468678713954258 0.006212495479539916 0.05993770763830411 5.248692204549158e-06 5.279948894518057 -0.12962570205384705 VPLSVQLKPEVS(ph)PTQDIR ddPTM_A549_PD325901_60min_R1 2 VPLSVQLKPEVSPTQDIR 18 1 A6PVJ6;A6PVJ7;Q5JWR1;H0Y4S7;B4DML5;G3XAG9;Q9BYM8 A6PVJ6 RBCK1 RanBP-type and C3HC4-type zinc finger-containing protein 1 1 VPLSVQLKPEVS(0.887)PT(0.113)QDIR;VPLSVQLKPEVS(0.5)PT(0.5)QDIR 146.6 2.0814000000000003e-17 20536500.0 7572.7 7296.3 8045.5 7783.6 8315.5 8004.1 7846.2 8287.1 9030.0 9155.1 8653.6 True False 8341.474929272903 7911.184807367078 8591.516011521755 8264.375294161826 7731.447966917645 7938.917263350894 8144.791434605388 8121.807289395818 8650.500502670882 8577.045423580863 7589.262059690088 1.0991154164484778 1.0424181883752393 1.132062108799099 1.0889563740403116 1.0187351426409124 1.0460723586708092 1.0731993928455785 1.0701708842727031 1.1398342071513776 1.130155390092184 1.0 12.889743896971723 -11.09904768113843 1.4515617678319552 1.0002350120432877 1.0848398067261327 0.0 0.05168713752096533 0.34777778355913896 1.3157640466822942 0.02810786167631476 0.006206257191231833 7.96071944977122e-12 11.09904768113843 0.08460479468284499 VPLT(ph)PTR ddPTM_A549_MK2206_60min_R1 4 VPLTPTR 7 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 VPLT(1)PTR;VPLT(0.996)PT(0.004)R;VPLT(0.99)PT(0.01)R;VPLT(0.537)PT(0.463)R 130.56 0.0060418 590661000.0 13338.900000000001 13119.7 12821.0 11525.7 16226.4 13264.099999999999 11584.8 12269.400000000001 16239.400000000001 16285.2 17686.2 True False 15590.180215205603 13787.436691230492 14639.210587932159 14349.497017408334 13839.518054982094 14667.698258003004 13689.608203919903 14008.625023461618 12561.201828992998 12606.362009437398 13294.228425712055 1.1727028990304544 1.0370994276406846 1.101170381548342 1.079377949430695 1.041017019702731 1.1033132415292755 1.0297407089412691 1.053737349387488 0.9448612906860148 0.9482582671030181 1.0 13.698512427621237 -8.38319272568692 1.7106736749122249 0.9745587177370613 1.0829255884920217 0.6005282810313234 0.0407921599558048 0.17830228537126386 1.0149387303837103 0.007071832686972215 0.008742854640073175 4.13815996062754e-09 8.38319272568692 0.10836687075496043 VPLT(ph)PTR ddPTM_A549_PD325901_60min_R1 1 VPLTPTR 7 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 VPLT(0.994)PT(0.006)R 117.76 0.0073816 469060000.0 4781.2 4436.6 4701.4 4167.0 4752.7 4634.0 4131.8 4846.5 4805.8 4716.8 5600.0 True False 5266.583904266593 4810.487852249053 5020.465275814851 4424.386126056361 4418.886747924902 4596.262240397801 4289.0379100077125 4749.8327554943 4603.828938619681 4418.980443025875 4911.2355013248225 1.0723541770387337 0.97948629239046 1.0222407934745878 0.9008702850561467 0.8997505305402057 0.9358667975009433 0.8733113915736131 0.9671360198901104 0.9374074888849827 0.8997696082449802 1.0 12.261870288308604 -5.166860046129111 1.2606666413295746 0.9530272442552885 1.1375094540863782 0.4221452019119084 0.044337474450857624 1.530910233150756 1.752598523311692 0.006891392057514535 0.38508113714246883 6.8098877585011365e-06 5.166860046129111 0.18448220983108965 VPLTPT(ph)R ddPTM_A549_PD325901_60min_R1 1 VPLTPTR 7 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 VPLT(0.034)PT(0.966)R 115.49 0.0076824 489640000.0 2786.7 2797.7 2870.4 3038.7 3241.1 2957.2 3187.6 3425.2 2921.0 3127.8 3440.9 True False 3069.603732539886 3033.471997529004 3065.202605117402 3226.3935976115854 3013.4563171879977 2933.1175436565336 3308.905862321648 3356.881698982582 2798.2405280511234 2930.310174206313 3017.691113662247 1.0172027609594005 1.0052294563202016 1.0157443189728903 1.0691596575290498 0.9985966766263529 0.9719740799106918 1.0965025039643586 1.11240069726974 0.9272786453797122 0.9710437761305898 1.0 11.559229425982666 -8.784848945225328 24.99642741628699 0.9656593645322696 1.033921272515976 0.3402763685132222 0.043187711278254666 212.10922230908673 226486.32264065713 0.008399433017758242 0.008944563494398509 1.6411604965948321e-09 8.784848945225328 0.06826190798370646 VPNGSGS(ph)PTKDALGGYTR ddPTM_A549_MK2206_60min_R1 2 VPNGSGSPTKDALGGYTR 18 1 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 VPNGS(0.199)GS(0.675)PT(0.125)KDALGGYT(0.001)R;VPNGS(0.126)GS(0.437)PT(0.437)KDALGGYTR 83.82600000000001 3.7230999999999996e-05 66260000.0 6291.0 6421.5 6175.9 6085.4 8654.3 6852.9 6529.0 5475.7 9250.1 9649.8 9953.5 True False 7352.7669998169595 6748.32692155587 7051.735486312317 7576.32327318399 7381.26393428189 7578.069329413134 7715.234787255116 6251.897243627951 7154.967119374365 7469.903477922839 7481.771247375072 0.9827575258193877 0.9019691592313083 0.9425221987088112 1.012637652593574 0.986566374489404 1.0128710273081187 1.0312043140802993 0.8356172672108074 0.9563199518943641 0.9984137754203062 1.0 12.8691641413123 -5.424934461530401 0.00403892992645827 1.9124152866718611 2.2388239939323323e-08 0.02837123910483974 0.054126882887062085 94644.08909494159 58.89725190803358 13535.23018325746 14361.803774601402 3.7589412540276265e-06 5.424934461530401 -1.9124152642836212 VPNGSGSPT(ph)KDALGGYTR ddPTM_A549_PD325901_60min_R1 1 VPNGSGSPTKDALGGYTR 18 1 E7EV90;Q5BKX6-2;Q5BKX6;Q5BKX6-3 E7EV90 SLC45A4 Solute carrier family 45 member 4 1 VPNGS(0.266)GS(0.284)PT(0.45)KDALGGYTR 59.556999999999995 0.001553 48650000.0 4645.0 4349.1 4963.6 4879.1 5235.2 5493.9 5270.4 5995.0 5648.0 5987.0 6203.7 True False 5116.55698053173 4715.613920167779 5300.459744551541 5180.470925759922 4867.497612459534 5449.159499896738 5470.967956073544 5875.4250220134845 5410.634201449073 5608.979798252187 5440.684228494425 0.9404252784484077 0.8667317789683061 0.9742266821499237 0.9521726878814816 0.894648064110586 1.001557758371259 1.0055661615905798 1.0799055367415364 0.9944767926636926 1.0309327949739022 1.0 12.409572383009298 -7.280483244693227 22.187348329781823 1.0051488142961995 0.9265413783224394 0.6146112392097743 0.035834012057665 109.99995959918881 128156.90305187438 0.005220325965453888 0.008358107593786699 5.242238254459004e-08 7.280483244693227 -0.07860743597376008 VPPAPVPCPPPS(ph)PGPSAVPSSPK ddPTM_A549_MK2206_60min_R1 1 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 VPPAPVPCPPPS(0.988)PGPS(0.01)AVPS(0.001)S(0.001)PK 57.688 0.00092903 4575400.0 1131.8 1825.8 1332.9 1604.2 1574.3 1530.9 1492.7 1581.7 2253.9 2153.3 2315.2 True False 1322.8201701466924 1918.7254213776712 1521.9252626670902 1997.2290720152755 1342.7225554625993 1692.8988218708241 1763.904268178237 1805.9108187530967 1743.395248738705 1666.8680344682002 1740.2719437306225 0.7601226779022603 1.1025434434485555 0.8745330108606691 1.1476534338270223 0.7715590429988797 0.972778322359065 1.0135796732991937 1.0377175965279104 1.001794722381944 0.9578204374742338 1.0 10.765097051205107 -7.5234168978570155 23.939317933743443 1.004571151188106 0.9419151236947345 0.07996853978714169 0.11206078691028029 22.527394849504162 1002083.228850726 0.015012524910779078 0.022394671342826963 2.996284875956234e-08 7.5234168978570155 -0.0626560274933714 VPPAPVPCPPPSPGPSAVPS(ph)SPK ddPTM_A549_PD325901_60min_R1 1 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 VPPAPVPCPPPS(0.077)PGPS(0.368)AVPS(0.483)S(0.072)PK 81.315 1.6199000000000002e-05 10329000.0 4383.1 4753.8 5532.5 5416.1 5407.6 5324.9 4742.6 5424.2 5437.4 5191.8 5412.7 True False 4828.0690853323185 5154.419409462549 5907.96871962515 5750.640196144436 5027.788831207248 5281.535779864967 4923.082238250302 5316.010075797415 5208.884987067841 4863.98886196187 4746.9722139322985 1.0170839153349165 1.0858330694109393 1.2445762168746939 1.2114332962106638 1.0591569962113443 1.1126114798742093 1.037099442840875 1.119873855632649 1.0973068204991459 1.0246507969197984 1.0 12.21279188974028 -10.924054872748743 0.30493894356812745 0.9412851597648486 1.1281682053300341 0.25695340064646754 0.06446247249468794 4.106271087483871 0.4378774711343488 0.269153036599675 0.03219702731129286 1.1910915050926616e-11 10.924054872748743 0.18688304556518553 VPPAPVPCPPPSPGPSAVPSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 VPPAPVPCPPPS(0.013)PGPS(0.25)AVPS(0.16)S(0.577)PK 73.072 4.4624e-05 5361600.0 1908.5 1766.4 1871.8 1656.3 2176.7 2083.3 1578.4 1717.1 2378.9 2513.7 2864.8 True False 2230.608141654853 1856.3022150955842 2137.2493860456607 2062.093574354132 1856.5103134570547 2303.7534232173803 1865.1748488594692 1960.5041833982052 1840.0829483226855 1945.8534241595291 2153.391095542283 1.0358583474559808 0.8620367284597303 0.9925040511544618 0.9576029076292063 0.862133365973418 1.0698258333037418 0.8661570360909137 0.910426437378992 0.8545047632693503 0.9036228617215072 1.0 11.072394647993908 VPPAPVPCPPPSPGPSAVPSS(ph)PK ddPTM_A549_PD325901_60min_R1 1 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 1 VPPAPVPCPPPSPGPS(0.007)AVPS(0.175)S(0.818)PK 84.94200000000001 5.7425e-06 8338700.0 4834.5 4547.8 5077.8 4305.6 5277.6 5153.1 5245.4 5074.7 5336.6 5936.6 5713.8 True False 5325.294881029203 4931.059066505485 5422.410043291926 4571.547133272926 4906.919582731594 5111.134862104862 5445.016567393017 4973.481127474863 5112.321260526404 5561.762062853502 5011.038822762461 1.0627127566522225 0.9840392862466619 1.08209300208588 0.9122952934443134 0.9792220248707896 1.0199751075341341 1.086604346918892 0.9925050081198745 1.0202118645147733 1.1099020102557182 1.0 12.290893999677614 -5.241975927965053 23.216737103263178 1.0094798531709401 1.0627128871943516 0.027043790551727898 0.05470283693828882 2869.9345994818405 3423222.9709292287 0.0057803138264393514 0.26770574037983885 5.728277807519142e-06 5.241975927965053 0.05323303402341151 VPPPALS(ph)RDRER ddPTM_A549_PD325901_60min_R1 1 VPPPALSRDRER 12 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 VPPPALS(1)RDRER 53.946000000000005 0.0044449 8062900.0 380.77 360.28 421.66 445.44 412.85 473.2 408.13 352.52 465.98 720.52 662.12 True False 419.4254900919411 390.6420600027697 450.27638324756253 472.9538171323606 383.8528402551802 469.34641608895976 423.6616104873055 345.48871205340964 446.3964810891002 675.0262442352875 580.6834375244982 0.7222962857008405 0.6727280903139055 0.7754248772224814 0.8144778834206156 0.6610363159169422 0.8082655466975648 0.7295913454900835 0.5949691169533898 0.768743263958286 1.162468568266697 1.0 9.181608075301407 -10.246379326835715 0.7550232158741359 0.995572134124067 0.726270558530489 0.7047884713373544 0.08370095913728705 0.2643634525635661 0.286339324865457 0.03813278314862224 0.013248519154333296 5.67049110031018e-11 10.246379326835715 -0.2693015755935779 VPPPPPIAR ddPTM_A549_PD325901_60min_R1 2 VPPPPPIAR 9 0 G3V4C1;G3V2Q1;G3V576;G3V575;G3V555;P07910-2;P07910;B2R5W2;G3V2D6;G3V4W0;P07910-4;P07910-3;G3V5V7;B4DY08 G3V4C1;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ; 83.61399999999999 0.0039308 12150200.0 2626.0 2929.1 3201.1 3471.6 4344.299999999999 3043.3999999999996 2974.8 3412.8 3820.0 3648.7 4004.2 False True 2892.5895868409734 3175.9455366773445 3418.3458957780517 3686.0328474243497 4039.1713550213867 3018.6155594360534 3088.0076418730205 3344.729026710192 3659.4586844078362 3418.3204593089645 3511.708784715152 0.8236985935254886 0.9043875023181791 0.9734138293746151 1.0496408083346631 1.1502011136578396 0.8595859578603711 0.8793461619920458 0.9524505680164181 1.0420735057348067 0.9734065860436196 1.0 11.777957496201916 -5.589731124161915 2.159698849987035 1.0048624457956463 0.823563844761266 0.2797182366537493 0.07719778102412601 0.3353737414530285 2.659433552171628 0.011263469260043445 0.0897890702089235 2.5719876319217195e-06 5.589731124161915 -0.18129860103438034 VPPREPLS(ph)PSNSR ddPTM_A549_MK2206_60min_R1 1 VPPREPLSPSNSR 13 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 VPPREPLS(0.952)PS(0.034)NS(0.014)R 58.711999999999996 0.0030372 7451400.0 3644.6 3659.9 3365.5 3496.3 5052.9 3462.4 3539.9 3857.0 5565.1 5085.8 5695.6 True False 4259.7193780850275 3846.1732773031763 3842.7785066442266 4352.8936569548705 4309.625103536157 3828.788869844889 4183.0540087922145 4403.741561567108 4304.613735638565 3936.914247758501 4281.225329436827 0.994976683146311 0.8983814168475734 0.8975884731462438 1.0167401437680157 1.0066335621029006 0.894320801925309 0.9770693404129871 1.028617095037695 1.005463016870643 0.9195765101848496 1.0 12.063808054115649 -8.000694788219223 24.999801570871085 1.0045207640580132 0.9506940402546682 0.0827745146903146 0.0486214587507366 26.131807873954255 940317.1660474084 0.006419386424278454 0.008810073005867418 9.984014700158934e-09 8.000694788219223 -0.05382672380334497 VPPREPLS(ph)PSNSR ddPTM_A549_PD325901_60min_R1 2 VPPREPLSPSNSR 13 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 VPPREPLS(0.82)PS(0.177)NS(0.003)R;VPPREPLS(0.685)PS(0.258)NS(0.057)R 91.31700000000001 5.0791e-05 25022000.0 8728.900000000001 8305.9 7562.599999999999 8445.6 9595.0 7733.1 7969.9 8371.5 9210.1 9020.2 10409.6 True False 9615.051502123448 9005.867342558588 8075.843513608161 8967.265530650733 8921.08030095302 7670.1241975011335 8273.198905796626 8204.523865185301 8823.031525985503 8450.66303260304 9129.285191891227 1.053209676335195 0.9864811048468218 0.8846085256249032 0.9822527549709584 0.977193735701987 0.8401670050042753 0.9062263618563487 0.8987038626499133 0.9664537080977881 0.9256653565942984 1.0 13.156286188630045 -9.291908597546643 1.8927154287969068 0.9893782792207447 0.9391764135285139 0.0 0.05926860162196931 0.4698936975645472 3.4654292885856686 0.01214435120563245 0.010833034222202678 5.106124531482257e-10 9.291908597546643 -0.05020186569223084 VPPREPLSPSNS(ph)R ddPTM_A549_MK2206_60min_R1 1 VPPREPLSPSNSR 13 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 VPPREPLS(0.388)PS(0.216)NS(0.396)R 44.045 0.018095 5360700.0 1139.0 1193.6 1120.2 1226.1 1742.6 1138.7 1317.9 1245.8 1712.7 1967.6 1851.5 True False 1331.235354123592 1254.3491417221974 1279.0612043211609 1526.494555041721 1486.2658484082606 1259.196478192114 1557.3453708260863 1422.39596510249 1324.7761846198941 1523.1177934424527 1391.7214511995721 0.9565386471381575 0.9012932441624947 0.9190497158886891 1.0968391366864276 1.067933419526729 0.9047762230773764 1.1190065149055202 1.0220406992192859 0.9518975104379 1.0944128166808276 1.0 10.442654773732375 VPQALNFS(ph)PEESDSTFSK ddPTM_A549_MK2206_60min_R1 1 VPQALNFSPEESDSTFSK 18 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 VPQALNFS(0.995)PEES(0.003)DS(0.001)T(0.001)FSK 84.14 0.00012021 2828700.0 478.84 452.88 442.86 556.31 697.68 318.23 739.21 320.28 509.31 595.2 689.94 True False 559.6564854859884 475.9296575931207 505.66420723591233 692.6059749737046 595.0521962111076 351.90488737602215 873.514888510775 365.68067081636326 393.95209820094493 460.74390661564723 518.6088566247007 1.0791494945312752 0.9177044539706627 0.9750396677121232 1.3355074178282298 1.1474007599560265 0.6785554910618958 1.6843424044007553 0.7051184455204815 0.7596324150052733 0.8884227500747671 1.0 9.018503034028852 VPQNQNGK ddPTM_A549_PD325901_60min_R1 2 VPQNQNGK 8 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 57.103 0.048177 3259700.0 2247.9 1722.56 2027.06 1511.4299999999998 2054.3 1638.92 1534.19 2023.81 2133.6000000000004 2705.2 2408.5 False True 2476.1051531834823 1867.726176524845 2164.6284813020065 1604.7875983934166 1910.013054950265 1625.5731789021947 1592.5744399909802 1983.4435219017691 2043.932211793863 2534.3932103276784 2112.2697687394343 1.1722485403278666 0.8842271021279026 1.024787890892279 0.7597455695022922 0.9042467412153171 0.7695859700119215 0.7539635625904928 0.9390105143082428 0.9676473346553863 1.199843527486624 1.0 11.044578385063252 -8.607137090343175 4.091270259293856 0.984564006398569 0.8879144271363025 0.16225314716637795 0.1333332651775972 0.34893983634046694 11.208180173246841 0.019512861968547148 0.022221187901834274 2.4709440383142737e-09 8.607137090343175 -0.09664957926226647 VPRS(ph)PDKPGK ddPTM_A549_MK2206_60min_R1 5 VPRSPDKPGK 10 2 Q9Y261;Q9Y261-2 Q9Y261 FOXA2 Hepatocyte nuclear factor 3-beta 1 VPRS(1)PDKPGK;VPRS(1)PDKPGK;VPRS(1)PDKPGK;VPRS(1)PDKPGK;VPRS(1)PDKPGK 78.763 0.00026869 63717500.0 9551.9 9088.1 9265.36 8065.59 11493.800000000001 8322.0 8041.24 8246.8 11873.2 12747.3 11771.199999999999 True False 11164.027198466321 9550.645471586375 10579.327370174176 10041.659912078097 9803.077245744787 9202.628516303483 9502.229220503496 9415.809154765777 9183.939157604316 9867.676076615655 8848.086171407182 1.2617448544458307 1.0794024025726074 1.195662786870402 1.1348962609030617 1.107931936447871 1.0400699471081118 1.073930456420078 1.064163365089414 1.0379576983870764 1.1152328182000877 1.0 13.111149720693165 -2.0000000000000004 0.17408605845207295 0.9865844447887501 1.9385648635207346 0.48941760671574897 0.051275697458375825 17.880677410246037 0.18411478271142742 0.040944308332511635 4.509325146823334 0.00999999999999999 2.0000000000000004 0.9519804187319846 VPRS(ph)PDKPGK ddPTM_A549_PD325901_60min_R1 4 VPRSPDKPGK 10 2 Q9Y261;Q9Y261-2 Q9Y261 FOXA2 Hepatocyte nuclear factor 3-beta 1 VPRS(1)PDKPGK;VPRS(1)PDKPGK;VPRS(1)PDKPGK;VPRS(1)PDKPGK 86.46700000000001 0.00015633 170528000.0 9797.4 9191.300000000001 11112.300000000001 10028.0 11385.100000000002 10120.0 10876.1 11067.0 10288.7 11262.0 11981.9 True False 10792.024835535327 9965.883107870151 11866.447501688308 10647.406784759589 10585.449852462772 10037.586075275303 11289.995937130285 10846.26000310646 9856.301718918034 10550.915398015053 10508.202259522122 1.0270096224838092 0.9483908723625354 1.12925571935346 1.013247225529117 1.0073511711168912 0.9552143960856515 1.0743984230889476 1.032170844758722 0.9379626957586049 1.0040647427065106 1.0 13.359228254071706 -8.744536705836081 24.93119102089369 0.9707046046740341 1.022965760670479 0.11771022524744257 0.05006999019294566 290.0463636125624 427813.8503740252 0.008425347677438235 0.00954120985301385 1.8007909282022133e-09 8.744536705836081 0.052261155996444875 VPS(ph)DSAITYR ddPTM_A549_PD325901_60min_R1 1 VPSDSAITYR 10 0 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;C9JQE8;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VPS(0.879)DS(0.121)AITYR 68.786 0.0027566999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VPS(ph)EGAYDIILPR ddPTM_A549_MK2206_60min_R1 1 VPSEGAYDIILPR 13 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 VPS(1)EGAYDIILPR 55.31399999999999 0.018031000000000002 3502200.0 578.98 732.27 557.48 479.21 896.72 563.22 356.07 537.76 794.13 818.57 819.82 True False 676.6976692980486 769.5394152219451 636.5390467639355 596.6164715125547 764.8136758778013 622.8195665648216 420.76330995526536 613.9891268209301 614.2608229650239 633.6544684784449 616.236068119057 1.0981143498522232 1.2487737330448985 1.0329467548156497 0.9681622066258027 1.2411050171280125 1.0106834033033143 0.68279565530717 0.9963537653597829 0.9967946615652307 1.0282657917323053 1.0 9.267339315147222 -5.903341738098527 5.863431020199242 0.9926031142567586 1.1715703857949367 0.23725279567056068 0.12487868825031541 0.21234054570756858 10.643580819212954 0.01686305061708009 0.05396986593841988 1.2492756120448344e-06 5.903341738098527 0.17896727153817804 VPS(ph)EGAYDIILPR ddPTM_A549_PD325901_60min_R1 2 VPSEGAYDIILPR 13 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 VPS(1)EGAYDIILPR;VPS(1)EGAYDIILPR 166.6 1.7324000000000002e-19 12449300.0 4059.0 3650.8 2863.8999999999996 3222.8999999999996 4119.1 3685.8999999999996 3431.3 3732.7 3407.7 4184.6 3746.0 True False 4471.066691922133 3958.465728483713 3058.2614760297242 3421.9712132630293 3829.7886261235617 3655.883252456248 3561.8799991794067 3658.248370253498 3264.4862195959613 3920.3836418516958 3285.265747850495 1.3609452126810417 1.2049149238760013 0.930902310728045 1.0416116916879492 1.1657469806299052 1.1128120319789179 1.0841984401139837 1.113531948715881 0.9936749323039912 1.1933231411847733 1.0 11.68179436071932 -5.5394452184169864 4.1869111383552715 1.02935941600499 1.3360297703228714 0.47590145480198576 0.08314563252484833 0.08636882927236127 3.450546962293112 0.010430743350049272 0.05295140100469345 2.887718010819078e-06 5.5394452184169864 0.3066703543178815 VPS(ph)GAAGGK ddPTM_A549_PD325901_60min_R1 2 VPSGAAGGK 9 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 VPS(1)GAAGGK;VPS(1)GAAGGK 62.536 0.007135600000000001 80572000.0 14141.099999999999 13493.0 13827.1 13720.1 17248.9 14088.099999999999 14261.3 14562.400000000001 14749.599999999999 14715.5 15996.3 True False 15576.69406187238 14630.10246368762 14765.4901551069 14567.559416392103 16037.396769474568 13973.371184494667 14804.021575582803 14271.941508018208 14129.725605115664 13786.360818637058 14028.856508900402 1.1103324103422096 1.0428578020172752 1.0525084596694785 1.0383996305864223 1.1431720582001732 0.9960449146820674 1.0552550427891687 1.0173274991417571 1.0071901153277365 0.9827145077640864 1.0 13.776109799329022 -7.991387645292869 0.9888857900074449 1.0025788866771939 1.0693775132285501 0.43307263281654806 0.03545623606133557 0.34686142700032224 0.6775187287570789 0.006164000292850532 0.009347714725955834 1.020028613714735e-08 7.991387645292869 0.06679862655135627 VPS(ph)KNQNDPLPGR ddPTM_A549_MK2206_60min_R1 1 VPSKNQNDPLPGR 13 1 O75534;O75534-4;E9PLT0;O75534-2;O75534-3 O75534 CSDE1 Cold shock domain-containing protein E1 1 VPS(1)KNQNDPLPGR 45.723 0.012614 11823000.0 2169.1 2297.5 2360.5 2291.4 3011.6 2315.8 2777.0 2399.3 3734.2 3786.9 3646.8 True False 2535.191050596563 2414.432936584072 2695.2543945724865 2852.7931028648545 2568.597629442397 2560.856418896371 3281.544953929768 2739.4081225480854 2888.409662292059 2931.4366598837273 2741.198913440237 0.9248475322846484 0.8807945037282721 0.9832392612435084 1.040709993308937 0.9370343818715355 0.934210358226965 1.197120332216749 0.9993467125339314 1.0537030523870559 1.0693994680614913 1.0 11.420591304916833 VPS(ph)PDHR ddPTM_A549_MK2206_60min_R1 1 VPSPDHR 7 0 Q8NAV1;Q8NAV1-2 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 1 VPS(1)PDHR 78.516 0.016738 63963000.0 2671.8 2131.6 2461.0 2154.7 2668.3 2160.2 1590.9 2440.2 3471.8 2904.8 3028.1 True False 3122.734520761557 2240.089335200264 2810.0068057796616 2682.601596728159 2275.796604675638 2388.790930175292 1879.945937056848 2786.105822799082 2685.4428433253615 2248.6036625287843 2276.139198691561 1.3719435623957716 0.9841618370651407 1.234549630090723 1.1785753693228662 0.9998494845938596 1.0494924614226093 0.8259362775956476 1.224048961680672 1.1798236438567065 0.9879025253909755 1.0 11.152373073906412 -5.248662587936469 23.824630905151167 1.0818612489134596 1.3719439206572757 0.3389706500649524 0.12091593459799194 987.8951485179324 1842044.8927519624 0.016497053708562713 0.3936490804714849 5.640757273377982e-06 5.248662587936469 0.2900826717438161 VPS(ph)PDHR ddPTM_A549_PD325901_60min_R1 1 VPSPDHR 7 0 Q8NAV1;Q8NAV1-2 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 1 VPS(1)PDHR 70.816 0.020981 103780000.0 2686.0 2739.8 3531.1 3307.1 3912.1 3492.3 2965.7 3202.2 3865.3 3519.1 3360.7 True False 2958.6807426713103 2970.6925613289363 3770.741680229258 3511.372056030959 3637.327592012331 3463.8598666683747 3078.561336393309 3138.329608922698 3702.8548829428278 3296.903425426635 2947.355205232559 1.0038426102896063 1.0079180670368286 1.279364520955909 1.1913637181555443 1.2340988237708288 1.175243438768033 1.0445165655391024 1.0647951775039175 1.256331397168892 1.1185972493486733 1.0 11.525205224305111 -11.100781638657175 1.4443363223539816 1.0001718811628244 1.1554872964498832 0.026112100008716888 0.1004917036982475 0.49305913351659136 1.8419843482195883 0.07311886646191204 0.01601235539876639 7.928998968312372e-12 11.100781638657175 0.15531541528705883 VPS(ph)PDHRR ddPTM_A549_PD325901_60min_R1 2 VPSPDHRR 8 1 Q8NAV1;Q8NAV1-2 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 1 VPS(1)PDHRR;VPS(1)PDHRR 79.16 0.0017342 58467000.0 3747.2000000000003 2805.3 2664.6 3082.3 2423.8 3847.3 3233.7 3268.1 2759.6000000000004 3370.0 4719.9 True False 4127.612985457157 3041.7124762012068 2845.435779541469 3272.6866705888 2253.5606496560627 3815.968864368248 3356.7602230485354 3202.9151817251477 2643.6236087675024 3157.217624872201 4139.3822219112535 0.9971567649897617 0.7348228100561282 0.6874059043109244 0.7906220047197576 0.5444195604182546 0.9218691726917458 0.8109326568781169 0.7737664728738879 0.6386517279737645 0.7627267682988784 1.0 12.015199754828785 -10.981728848695322 1.2449505978869948 1.000407028835739 0.7511207369235703 0.0 0.13683092570519612 0.39384867870831725 1.0830345068933067 0.0833701202420428 0.019032029321491197 1.0429684023841037e-11 10.981728848695322 -0.24928629191216867 VPS(ph)PGMEEAGCSR ddPTM_A549_MK2206_60min_R1 4 VPSPGMEEAGCSR 13 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR 123.95 5.0377999999999994e-06 70426000.0 15728.900000000001 16088.6 15733.7 13741.699999999999 19048.7 17479.5 15282.1 16213.0 22789.1 20671.199999999997 25084.5 True False 18383.553785315686 16907.44102003329 17964.97524587382 17108.41711688836 16246.661463660303 19329.169088046965 18058.659755293516 18511.24240023011 17627.405236714665 16001.5615632281 18855.32635301954 0.9749793475397309 0.896693098994051 0.9527798622799686 0.9073519490766371 0.8616483830341404 1.025130444637016 0.9577484588274738 0.9817513658290868 0.9348766977927044 0.8486494088534071 1.0 14.202684500795838 -7.2640881127951396 24.99966684523762 0.9721077322871821 0.9187323809035263 0.0954553802367244 0.0510912421375491 215.02854426051562 2029521.396098675 0.005530035924617711 0.00909845803102199 5.4439219142509914e-08 7.2640881127951396 -0.05337535138365579 VPS(ph)PGMEEAGCSR ddPTM_A549_PD325901_60min_R1 2 VPSPGMEEAGCSR 13 0 Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR 79.86 0.00025885 39552000.0 14455.2 14233.5 14875.400000000001 13818.7 14487.7 16467.2 14605.7 14761.9 13971.8 16267.5 16919.800000000003 True False 15922.681262644199 15433.0069974726 15884.934097046891 14672.24971445526 13470.133931851704 16333.09658288275 15161.527906045716 14467.462324013477 13384.613834243293 15240.367273771084 14838.771863449245 1.0730457620866072 1.0400461129459824 1.0705019420222064 0.9887779022060336 0.9077660911433809 1.1007040699314419 1.0217508595432674 0.9749770706866668 0.9020028043703655 1.027063925102255 1.0 13.857084071249929 -8.336630280518365 3.984653925030987 0.9532445226357429 1.0276559478309353 0.1318408577439062 0.05694404477867762 0.2464029060661569 7.550595610449536 0.00976573243579004 0.011966142471470114 4.606485616941151e-09 8.336630280518365 0.0744114251951924 VPS(ph)PGPPTLTSYSVLR ddPTM_A549_PD325901_60min_R1 1 VPSPGPPTLTSYSVLR 16 0 F8W130;Q12815;F8W1U0 F8W130 TROAP Tastin 1 VPS(0.999)PGPPT(0.001)LTSYSVLR 111.78 3.5917e-07 8436300.0 4155.2 4651.6 4001.8 4229.9 5750.1 5291.9 4954.0 5108.1 5756.1 5746.2 5552.0 True False 4577.032845103432 5043.606656791622 4273.386212778297 4491.171316200098 5346.232812768108 5248.80452092385 5142.52718093282 5006.214938273071 5514.191134376946 5383.383951347373 4869.139197027751 0.940008625733553 1.0358312738051052 0.8776471651060793 0.9223748047584316 1.0979831539898441 1.0779738077990986 1.0561470873685337 1.0281519454874066 1.1324776128279412 1.105613073175959 1.0 12.249451029054535 -6.758322735588955 24.99931386134843 1.0639930373682116 0.9457902759362662 0.6059717075786755 0.04912599494601919 53.94761390162245 432718.78004774504 0.008340748921095532 0.016795259489154172 1.7445252687487165e-07 6.758322735588955 -0.11820276143194541 VPS(ph)PLTDEEGDFILIHHEDLR ddPTM_A549_PD325901_60min_R1 1 VPSPLTDEEGDFILIHHEDLR 21 0 H0Y517;H7C1U3;Q5T0F9-3;Q5T0F9-2;Q5T0F9 H0Y517 CC2D1B Coiled-coil and C2 domain-containing protein 1B 1 VPS(0.957)PLT(0.043)DEEGDFILIHHEDLR 49.765 0.015595 1811900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VPS(ph)PPDEHQEAENAVSSGNR ddPTM_A549_MK2206_60min_R1 2 VPSPPDEHQEAENAVSSGNR 20 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 VPS(1)PPDEHQEAENAVSSGNR;VPS(1)PPDEHQEAENAVSSGNR 94.594 6.879699999999999e-07 10952700.0 3564.0 4404.1 3720.6000000000004 3552.3 5849.8 4359.9 3714.8999999999996 4234.1 6641.1 6004.6 5457.0 True False 4165.516068565835 4628.249878567972 4248.237026242912 4422.61365946881 4989.302169183202 4821.26172413261 4389.849243555523 4834.296641387424 5136.901453657485 4648.156689624186 4101.876294461826 1.015514796043443 1.1283250752385763 1.0356814104751761 1.0781928420025806 1.216346328122947 1.1753796014380216 1.07020517646583 1.1785573952862693 1.2523296864396192 1.1331781740711986 1.0 12.002068267933389 -6.548089740429191 24.614837482174448 1.1330015106235716 1.065063537313821 0.22916614349483644 0.0700714150632802 356.9939620705425 348551.0432864745 0.014031513329514137 0.029209668459525044 2.8308069916297873e-07 6.548089740429191 -0.06793797330975049 VPS(ph)PPDEHQEAENAVSSGNR ddPTM_A549_PD325901_60min_R1 2 VPSPPDEHQEAENAVSSGNR 20 0 Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7 Q9BXS6-4 NUSAP1 Nucleolar and spindle-associated protein 1 1 VPS(1)PPDEHQEAENAVSSGNR;VPS(1)PPDEHQEAENAVSSGNR 89.891 1.2615000000000001e-06 17984800.0 5934.200000000001 6039.0 6134.0 6982.6 7876.700000000001 6530.4 6615.9 7244.2 6925.5 7149.2 8526.2 True False 6536.63561547285 6547.927723872341 6550.290126738482 7413.899343364809 7323.467765139831 6477.218587547221 6867.6716948593885 7099.7087480350365 6634.445319074995 6697.798291909894 7477.531452034942 0.8741702602526619 0.8756803987886111 0.8759963323131033 0.9914902252062322 0.9793964508363004 0.8662241849593967 0.9184410308284847 0.9494722681645044 0.8872507406531189 0.8957231855022354 1.0 12.86834635829149 -10.891142153862681 1.0106453984462134 1.0027339468983911 0.9129039899850051 0.0 0.051550217672019685 0.5261580845569175 0.9048441338520691 0.03551807219266878 0.007510967089566636 1.2848660270043402e-11 10.891142153862681 -0.08982995691338602 VPS(ph)PPPGHK ddPTM_A549_MK2206_60min_R1 3 VPSPPPGHK 9 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 VPS(1)PPPGHK;VPS(1)PPPGHK;VPS(1)PPPGHK 50.284 0.008748700000000002 11235300.0 2910.2200000000003 2790.66 2614.05 2398.62 3423.2 3129.33 2536.3 2487.0099999999998 3869.3 4172.5 4308.5 True False 3401.3939879522077 2932.6926741274015 2984.7615971752643 2986.2820076781445 2919.6518146856206 3460.473623518862 2997.112879601032 2839.5512836486937 2992.9097280024266 3229.9293520728947 3238.580541449288 1.0502730886013598 0.9055487849053155 0.9216264838791263 0.9220959520561319 0.9015220641630409 1.0685155361213512 0.9254402789253475 0.8767888423049606 0.924142441324951 0.9973287095177439 1.0 11.661145908102807 -10.82312545447198 1.1378428092262989 0.9991266860627263 0.9405564231980446 0.11507512500138195 0.05757940339504808 0.8048985688796002 1.892797026041778 0.03585849058237668 0.009429136991002587 1.5027078167852868e-11 10.82312545447198 -0.0585702628646817 VPS(ph)PPPGHK ddPTM_A549_PD325901_60min_R1 2 VPSPPPGHK 9 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 VPS(1)PPPGHK;VPS(1)PPPGHK 57.836000000000006 0.0038891 24041000.0 6184.4 5766.9 6482.5 5880.0 6612.1 6488.9 6298.1 6230.9 7043.700000000001 6993.700000000001 7385.6 True False 6812.235735285344 6252.896901937307 6922.441432439227 6243.194245551097 6147.68890650667 6436.056549787934 6537.777641952559 6106.619811453512 6747.677784126561 6552.1165884476895 6477.218021175823 1.0517224698959113 0.9653676750566141 1.0687368264906083 0.96386970843661 0.9491248999814687 0.993645192850801 1.0093496344539816 0.9427843545622947 1.0417555441343074 1.011563385241473 1.0 12.661158590234395 VPS(ph)PTEEPYAPEL ddPTM_A549_MK2206_60min_R1 1 VPSPTEEPYAPEL 13 0 Q6N075;Q6N075-2 Q6N075 MFSD5 Molybdate-anion transporter 1 VPS(0.911)PT(0.089)EEPYAPEL 73.848 0.0011923 1583800.0 212.01 289.22 340.06 186.9 525.93 341.78 408.62 335.49 379.45 436.46 304.4 True False 247.79210485315434 303.94006264149976 388.28562144389736 232.69050839025982 448.5663936952584 377.9469327447974 482.8609647370478 383.04673489503455 293.5051808571371 337.8633828653651 228.8090789873886 1.0829644782880843 1.328356654319002 1.6969852033943928 1.0169636162168423 1.9604396629732612 1.6518004198846887 2.1103225749344587 1.674088880520983 1.282751463167746 1.476617030935155 1.0 7.838000488176929 -9.130004308921212 1.9524318737547068 1.097007343080095 1.5736651632707674 0.10586452041445715 0.3381535583249086 0.27990700659972734 2.1983996530822365 0.06609318401439414 0.06271388237475622 7.413028863109044e-10 9.130004308921212 0.4766578201906724 VPS(ph)S(ph)DEEVVEEPQSR ddPTM_A549_MK2206_60min_R1 2 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 VPS(1)S(1)DEEVVEEPQSR;VPS(1)S(1)DEEVVEEPQSR 92.06299999999999 3.2245e-05 6271300.0 408.84 1053.45 698.84 560.61 1313.71 592.1 813.81 870.48 1428.55 1239.62 1508.1100000000001 True False 477.8421968216764 1107.0661053512474 797.9460203783251 697.9594751667395 1120.4649992611137 654.7556289958292 961.6687428727342 993.8732057331953 1104.9857059255853 959.5889810465198 1133.6046652814407 0.4215245503625748 0.9765892283765394 0.7039014965417583 0.6156991908580904 0.9884089520599628 0.5775872745136177 0.8483281450098656 0.8767370461433711 0.974754021192432 0.8464935002788491 1.0 10.146701885367062 -8.363701604757939 1.5062861600942994 0.990529364188002 0.7325787992513046 0.24823260167434247 0.16187977847025378 0.28766995806840295 1.266312085033136 0.025601072356902937 0.03195245380281418 4.328111049405424e-09 8.363701604757939 -0.2579505649366973 VPS(ph)S(ph)DEEVVEEPQSR ddPTM_A549_PD325901_60min_R1 4 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 VPS(1)S(1)DEEVVEEPQSR;VPS(1)S(1)DEEVVEEPQSR;VPS(1)S(1)DEEVVEEPQSR;VPS(1)S(1)DEEVVEEPQSR 132.08 2.5873000000000004e-09 31491100.0 5676.6 6611.099999999999 5324.5 5075.400000000001 6433.46 6461.2 5619.5 6893.0 5564.36 6557.099999999999 6944.099999999999 True False 6252.884253107953 7168.24059865747 5685.852588819541 5388.895930930277 5981.595963832119 6408.58212940403 5833.3531476083945 6755.513707546112 5330.509299783135 6143.083586958311 6090.019722276733 1.026742857701343 1.1770471895906518 0.9336345115634378 0.8848733134998218 0.9821964848409259 1.052308928649611 0.957854557723438 1.10927616257712 0.8752860487930149 1.008713250055246 1.0 12.57223118490942 -8.77801463709505 24.99807292109576 0.9411073137320156 1.0119905887314986 0.0617955853967862 0.08368752458079819 389.1813470107523 586943.8681813447 0.015352229200272068 0.01636541299359072 1.6671910220036295e-09 8.77801463709505 0.07088327499948299 VPS(ph)SDEEVVEEPQSR ddPTM_A549_MK2206_60min_R1 2 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VPS(0.877)S(0.123)DEEVVEEPQSR;VPS(0.868)S(0.132)DEEVVEEPQSR 105.14 5.2946e-06 45870000.0 867.1600000000001 1020.31 762.81 1151.19 1174.77 908.99 818.71 881.4200000000001 1577.9099999999999 944.58 1361.3 True False 1013.5154079734984 1072.2394209036324 870.9879282880061 1433.2316016788834 1001.962889208409 1005.1787184612721 967.4590094461071 1006.3639842355407 1220.515904404494 731.1987219606991 1023.251640031314 0.9904850071312687 1.0478746174995814 0.8511962201803573 1.4006638695785751 0.9791949995582186 0.9823377546020949 0.9454751613361699 0.9834960872427662 1.1927817720059 0.7145834840179907 1.0 9.998945263745208 VPS(ph)SDEEVVEEPQSR ddPTM_A549_PD325901_60min_R1 3 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VPS(0.852)S(0.148)DEEVVEEPQSR;VPS(0.558)S(0.442)DEEVVEEPQSR;VPS(0.958)S(0.042)DEEVVEEPQSR 186.68 2.0929e-33 82047000.0 2555.73 2985.7099999999996 3348.3 2768.33 3383.24 2993.5499999999997 2739.4300000000003 2645.92 3093.53 3374.6000000000004 3392.21 True False 2815.185828171015 3237.326260050157 3575.5357729635593 2939.323456766404 3145.612893944376 2969.171521308338 2843.6805077236154 2593.1450499159146 2963.51969214036 3161.527180087163 2974.989674990906 0.9462842348115444 1.0881806707648667 1.2018649352033428 0.9880113136108242 1.0573525415525993 0.9980443113024968 0.9558623116002269 0.8716484200651355 0.9961445301988884 1.0627018999979645 1.0 11.538668946069134 -6.410601234020203 21.048086127124293 0.9897411495125882 1.0822619736068113 0.2231403381897613 0.07263721004778687 7.340195760262202 1363.2052815282145 0.00954451864917049 0.022179447141466423 3.8850692645518915e-07 6.410601234020203 0.09252082409422313 VPS(ph)TPPPK ddPTM_A549_MK2206_60min_R1 2 VPSTPPPK 8 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 VPS(0.5)T(0.5)PPPK;VPS(0.678)T(0.322)PPPK 99.65299999999999 0.0024043000000000003 104096000.0 7438.3 8867.5 8371.1 7296.700000000001 10971.8 8369.3 8547.0 8162.9 12314.3 12831.0 12756.8 True False 8693.703191025044 9318.817873845166 9558.24785528733 9084.391827561312 9357.862754255577 9254.933770908283 10099.879265840013 9320.016072832812 9525.130711896272 9932.468188483484 9588.934490231 0.9066391265767851 0.9718303825455245 0.9967997867776724 0.9473828230671817 0.9759022510571081 0.9651681091717761 1.0532848332762677 0.9719553389720039 0.9933461034278908 1.0358260553977576 1.0 13.227154798439098 -7.567817682264655 24.99999894433977 0.9988338930888964 0.9626371233866231 0.38342302981691023 0.0299746768851594 119.10842116664456 66260.85005902228 0.00396290018171655 0.005877932639996744 2.7050937298050868e-08 7.567817682264655 -0.03619676970227326 VPS(ph)VAEAPQLRPAGTAAAK ddPTM_A549_MK2206_60min_R1 2 VPSVAEAPQLRPAGTAAAK 19 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 VPS(1)VAEAPQLRPAGTAAAK;VPS(1)VAEAPQLRPAGTAAAK 80.683 6.8864e-05 21379000.0 3891.3999999999996 4217.1 4035.8 3360.08 5312.8 4455.0 4580.5 4495.8 6640.700000000001 6072.4 6959.0 True False 4548.173184404347 4431.732377309551 4608.137125869789 4183.299750839723 4531.2941578236005 4926.425143010336 5412.717559047638 5133.093417810059 5136.592053018815 4700.640622535041 5230.888241370687 0.8694839144971976 0.8472236784298555 0.8809473483727662 0.7997302862933167 0.8662571151847498 0.9417951437095566 1.034760696326654 0.9813043561536688 0.9819731976672545 0.8986314380334187 1.0 12.352840231634092 -7.372572379117551 2.9960409393796943 0.9932085149112116 0.8499729672819161 0.7210476279051629 0.037277844243387995 0.058166497874723874 1.003481097043042 0.0034904862350325617 0.005827674196071613 4.2406030452197776e-08 7.372572379117551 -0.14323554762929558 VPS(ph)VAEAPQLRPAGTAAAK ddPTM_A549_PD325901_60min_R1 2 VPSVAEAPQLRPAGTAAAK 19 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 VPS(1)VAEAPQLRPAGTAAAK;VPS(1)VAEAPQLRPAGTAAAK 64.488 0.00060271 28340000.0 5049.4 6156.1 4973.6 5617.9 5580.0 6360.4 5270.5 6295.9 5800.8 7198.7 7904.9 True False 5562.011370828182 6674.896151834828 5311.138404686422 5964.904923823387 5188.080049954964 6308.603011183901 5471.0717616282645 6170.323335461996 5557.012548825384 6744.17285346217 6932.64741328975 0.8022925499089879 0.962820659109128 0.7661053689972857 0.860407946376846 0.748354811757701 0.9099846905657472 0.7891749623874318 0.8900385332785865 0.8015714946317188 0.9728134796720977 1.0 12.759190673194922 -10.833537803842948 0.9033258990702958 1.0077610256450458 0.8362513853732398 0.45960043000227224 0.0623644728235951 0.40815105953158176 0.5457179306802493 0.04895638012235646 0.0100453652147998 1.4671083746045463e-11 10.833537803842948 -0.17150964027180593 VPS(ph)VESLFR ddPTM_A549_MK2206_60min_R1 2 VPSVESLFR 9 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 VPS(0.936)VES(0.064)LFR;VPS(0.952)VES(0.048)LFR 157.78 1.1515e-05 34316000.0 11455.7 13379.2 12615.099999999999 11601.4 17016.0 14836.7 14205.8 13632.6 21057.8 22619.9 20493.5 True False 13389.142095025141 14060.144132816376 14404.110871837056 14443.743520806633 14512.9689409589 16406.709746195607 16786.809977146375 15565.062798086541 16288.24192239669 17510.04887979718 15404.39835817361 0.869176567867763 0.9127356879443481 0.9350648131086665 0.9376376269276852 0.9421315005956259 1.065066571554232 1.089741357424664 1.0104297770141528 1.0573760521944766 1.1366915132070905 1.0 13.911054716413611 -7.124683501392837 4.260051651935971 1.0338109353999179 0.9174600898775227 0.7137446893435092 0.04279654476085137 0.0942567694193878 2.840883319857297 0.005100127188627373 0.009063715837145577 7.504409051492142e-08 7.124683501392837 -0.11635084552239516 VPS(ph)VESLFR ddPTM_A549_PD325901_60min_R1 2 VPSVESLFR 9 0 Q13439-3;Q13439-4;Q13439;Q13439-5;E7EVX2;Q86W71 Q13439-3 GOLGA4 Golgin subfamily A member 4 1 VPS(0.842)VES(0.158)LFR;VPS(0.847)VES(0.153)LFR 160.97 7.7893e-06 108533000.0 15897.0 16384.7 16662.800000000003 16716.1 20854.2 18426.9 18655.2 19177.1 21365.2 21299.0 21209.3 True False 17510.851737247136 17765.49617110965 17793.63780955624 17748.61553198242 19389.472935084374 18276.83743581923 19365.133844517135 18794.59769635608 20467.29494348437 19954.17750508993 18600.6905568301 0.9414086903788215 0.9550987430725377 0.9566116782165641 0.9541912155226516 1.0424060803465511 0.9825891882873159 1.0410975756707233 1.010424727992412 1.1003513488357484 1.072765413957324 1.0 14.183068562410751 -6.900603713776924 0.8582962189081588 1.0449650860844772 0.942718489367315 0.6139083708677258 0.031572187046136485 0.4040549722931996 0.5598360632497288 0.006880877989911321 0.02269091831793613 1.2571765924299067e-07 6.900603713776924 -0.1022465967171623 VPS(ph)WGLEDNVVCSQPAR ddPTM_A549_MK2206_60min_R1 1 VPSWGLEDNVVCSQPAR 17 0 B8ZZD4;Q86VP1-2;Q86VP1;Q86VP1-3;Q86VP1-4;H7C3L5 B8ZZD4 TAX1BP1 Tax1-binding protein 1 1 VPS(1)WGLEDNVVCSQPAR 53.169 0.014753 1008700.0 794.36 643.53 742.96 623.84 1035.6 713.13 898.28 871.72 1304.2 951.22 1008.1 True False 928.4285477626132 676.2829282611305 848.3228998057933 776.6808280052421 883.2646118510241 788.5929432626172 1061.4858484753443 995.2889795305365 1008.8007823794388 736.3387413490184 757.7609478554086 1.225226175075692 0.8924752986745031 1.1195125615891004 1.0249681383071798 1.1656243494083616 1.040688287638032 1.4008188881724881 1.313460376055763 1.3312915969535186 0.9717295981443506 1.0 9.565598980469726 VPS(ph)YDSFDSEDYPAALPNHKPK ddPTM_A549_MK2206_60min_R1 1 VPSYDSFDSEDYPAALPNHKPK 22 1 P14921-4;P14921;P14921-3 P14921-4 ETS1 Protein C-ets-1 1 VPS(0.999)YDS(0.001)FDSEDYPAALPNHKPK 111.67 5.7123999999999994e-11 3001800.0 691.4 1111.4 943.05 752.05 1449.8 843.98 836.32 794.13 1486.6 1360.9 1685.1 True False 808.0914168929339 1167.9655128267846 1076.7886705365736 936.3022837608078 1236.5363405384462 933.289403411417 988.2685184985752 906.7003594211272 1149.8874736123857 1053.4717448139018 1266.6431636059401 0.6379787457995831 0.9220951459618387 0.8501120927152997 0.7391997293817919 0.9762310144383645 0.7368210954966071 0.7802264654278205 0.7158293554752149 0.9078227449148593 0.8317036518910568 1.0 10.306794432973149 -9.090378849585203 2.4021082428314533 0.96635186851155 0.803111953082992 0.16253366427263038 0.10117272026245384 0.19688178785884236 2.341999142791831 0.01727885426591777 0.01680824797569862 8.121217661284257e-10 9.090378849585203 -0.16323991542855798 VPSEGAY(ph)DIILPR ddPTM_A549_MK2206_60min_R1 2 VPSEGAYDIILPR 13 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 VPS(0.002)EGAY(0.998)DIILPR;VPS(0.008)EGAY(0.992)DIILPR 87.568 0.00020477 4137600.0 1703.35 2343.7 1573.1599999999999 1247.85 2522.8999999999996 2124.5699999999997 2130.92 1915.2 2707.4 2879.8999999999996 2752.1000000000004 True False 1990.833837090799 2462.9843192479175 1796.2577434296354 1553.5733060181153 2151.7847520654213 2349.3905872245723 2518.080580924747 2186.6854650540117 2094.178222829392 2229.3285898225827 2068.6776159040473 0.9623702706430508 1.190608096840431 0.8683120702906819 0.7509982677214677 1.0401740394551786 1.1356968186644436 1.2172416627732026 1.0570450650418977 1.0123270086790204 1.0776587771257573 1.0 11.014493116822065 VPSEGAY(ph)DIILPR ddPTM_A549_PD325901_60min_R1 2 VPSEGAYDIILPR 13 0 J9JIE0;A8MXZ4;A0A0C4DFY5;Q9NQ84;Q9NQ84-2 J9JIE0 GPRC5C G-protein coupled receptor family C group 5 member C 1 VPS(0.018)EGAY(0.982)DIILPR;VPSEGAY(1)DIILPR 123.51 6.0462e-06 7878200.0 2080.21 1884.54 1960.6 1876.1100000000001 2105.0 2153.7 1801.5500000000002 1999.79 2137.1 1888.55 2385.31 True False 2291.391387830335 2043.3567995937065 2093.6581060455615 1991.993053745046 1957.15206185577 2136.160981256958 1870.108971095988 1959.9026196450936 2047.2851189654402 1769.3066306980413 2091.931991725912 1.0953469792007255 0.976779746031739 1.00082512927116 0.9522264880616824 0.9355715528022761 1.0211426517238524 0.8939626041825035 0.9368863937245445 0.9786575888044826 0.8457763625663115 1.0 11.0306202352935 -5.261405035320355 11.209835473085825 0.9766930785386926 1.0954860986575863 0.2964823630629827 0.05305475647000902 0.04484674086423046 336.5780114287288 0.00496970844101853 0.03966232605081758 5.477658646824989e-06 5.261405035320355 0.1187930201188937 VPSGETPPS(ph)PSQEGEEGSGLSRPGEAGLGGQER ddPTM_A549_MK2206_60min_R1 2 VPSGETPPSPSQEGEEGSGLSRPGEAGLGGQER 33 1 Q9P2Y4 Q9P2Y4 ZNF219 Zinc finger protein 219 1 VPS(0.009)GET(0.183)PPS(0.663)PS(0.143)QEGEEGS(0.002)GLSRPGEAGLGGQER;VPSGET(0.027)PPS(0.95)PS(0.022)QEGEEGSGLSRPGEAGLGGQER 78.542 3.6674000000000002e-06 27267000.0 3201.1299999999997 4291.4 3054.8999999999996 2947.8 4715.4 3987.4 3535.9 3823.1000000000004 5961.9 4896.6 5245.3 True False 3741.4024838855617 4509.813929948592 3488.130756187032 3670.0111323317697 4021.77090645261 4409.344021378093 4178.327260569054 4365.036132752714 4611.539169197958 3790.4546591636067 3942.747247084591 0.948932875839832 1.143825268861277 0.8846955022963446 0.9308258689535597 1.0200427910834131 1.118343060067703 1.0597502195096729 1.1071052388611466 1.1696258674983275 0.9613739916923169 1.0 11.944985512971037 -7.052275058325663 5.404748645236289 1.0846307148061918 0.981403659876688 0.21115587233440358 0.08047020122687913 0.2270627814352373 14.908386392474048 0.012297573649414213 0.021849315193375046 8.865943139289286e-08 7.052275058325663 -0.10322705492950379 VPSGETPPS(ph)PSQEGEEGSGLSRPGEAGLGGQER ddPTM_A549_PD325901_60min_R1 2 VPSGETPPSPSQEGEEGSGLSRPGEAGLGGQER 33 1 Q9P2Y4 Q9P2Y4 ZNF219 Zinc finger protein 219 1 VPS(0.001)GET(0.002)PPS(0.835)PS(0.159)QEGEEGS(0.003)GLS(0.001)RPGEAGLGGQER;VPS(0.025)GET(0.055)PPS(0.716)PS(0.204)QEGEEGSGLSRPGEAGLGGQER 72.585 2.7649000000000002e-05 38420000.0 3017.7999999999997 3636.5 2897.1299999999997 3774.7 4148.9 3022.25 2825.05 3908.1000000000004 4518.3 4008.0 4762.8 True False 3324.1648344130563 3942.960617297859 3093.7466636579497 4007.854646034307 3857.495576927979 2997.6377980237935 2932.558823676679 3830.1498796548585 4328.411563811496 3754.9341959904395 4177.005793876759 0.7958248081163986 0.9439681944128504 0.7406613292692095 0.95950421038668 0.9235073560546259 0.7176522959144925 0.7020720028628247 0.9169606336839728 1.036247440728162 0.8989535522059723 1.0 12.0282534293099 -8.558373186277638 4.8981621596280505 1.0162503014749786 0.8304782304794249 0.3339107551855428 0.09114097176776752 0.11787460758543866 6.853112794566155 0.01434567039125051 0.01646863560957742 2.7645650526232447e-09 8.558373186277638 -0.1857720709955537 VPSPLEGSEGDGDT(ph)D ddPTM_A549_MK2206_60min_R1 1 VPSPLEGSEGDGDTD 15 0 F5H168;F5H1S9;Q9Y606-2;Q9Y606 F5H168 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial 1 VPSPLEGSEGDGDT(1)D 76.07300000000001 0.00067498 1872000.0 1042.2 857.42 890.19 665.37 1093.8 873.33 1027.9 769.5 1218.0 1169.9 1573.9 True False 1218.0978806563721 901.0590156630748 1016.4323276867108 828.3856798695941 932.9034689480986 965.7452009304645 1214.6561246468884 878.5789814949152 942.1249447463249 905.6187774691632 1183.0571925698116 1.029618760873636 0.7616360572609457 0.8591573882229971 0.7002076358372772 0.788553144182037 0.8163131985468035 1.026709555781017 0.7426344110942639 0.7963477595701534 0.7654902765114824 1.0 10.20830410427587 VPSPLEGSEGDGDT(ph)D ddPTM_A549_PD325901_60min_R1 2 VPSPLEGSEGDGDTD 15 0 F5H168;F5H1S9;Q9Y606-2;Q9Y606 F5H168 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial 1 VPSPLEGSEGDGDT(1)D;VPSPLEGSEGDGDT(1)D 172.33 2.9211e-27 11682700.0 7834.400000000001 7950.799999999999 9768.0 9355.6 9519.7 8012.6 7997.3 9199.2 8436.8 9879.400000000001 10127.400000000001 True False 8629.742520619551 8620.841819335024 10430.915219755707 9933.474163890793 8851.069113182124 7947.348042169062 8301.641627790481 9015.71473936721 8082.230635762314 9255.612997971048 8881.794002878032 0.9716215572916005 0.970619428523286 1.1744153508149031 1.1184085288030747 0.996540688774593 0.8947908541443119 0.9346807216087696 1.0150781178268469 0.9099772673339834 1.0420882307078823 1.0 13.116635395657196 -6.98379113217236 11.613165241519294 0.9550852715851385 1.06036062432745 0.27849707077288643 0.06847606855329336 0.4797669115634515 337.7277513872824 0.009851682371735261 0.01852520582928863 1.0380275205375977e-07 6.98379113217236 0.10527535274231148 VPSPT(ph)EEPYAPEL ddPTM_A549_MK2206_60min_R1 1 VPSPTEEPYAPEL 13 0 Q6N075;Q6N075-2 Q6N075 MFSD5 Molybdate-anion transporter 1 VPS(0.424)PT(0.576)EEPYAPEL 100.55 0.00016061 1395600.0 446.4 278.3 348.41 200.4 416.85 382.91 327.49 244.12 430.07 512.22 469.5 True False 521.7414065678418 292.46428128459075 397.8197770019065 249.4980089962979 355.5319171978558 423.4292820449129 386.9906939007778 278.7247575861455 332.6598316806666 396.5091462477602 352.9101924591947 1.478397104181592 0.8287215488070863 1.1272549943365675 0.7069730892658934 1.0074288722589508 1.1998216291071615 1.096569898432513 0.7897894805584939 0.94261894042386 1.1235412145077295 1.0 8.46315728721452 VPSS(ph)DEEVVEEPQSR ddPTM_A549_MK2206_60min_R1 2 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VPS(0.061)S(0.939)DEEVVEEPQSR;VPS(0.031)S(0.969)DEEVVEEPQSR 163.8 6.0928e-20 42432000.0 1501.99 1974.97 1866.0900000000001 1737.2199999999998 2690.7 2251.4700000000003 1886.6399999999999 2125.7799999999997 2890.3 2399.2799999999997 2810.3 True False 1755.4891918701453 2075.4875372210854 2130.729622185032 2162.8389779867703 2294.9015943487357 2489.7190609951713 2229.418066936281 2427.1158249282157 2235.6516648606753 1857.2809816276713 2112.4249496657612 0.8310303247213151 0.9825142131319173 1.0086652415851114 1.0238654766546786 1.0863825456671712 1.178607108095891 1.0553833248793199 1.1489713872733072 1.0583342453015487 0.8792174992638389 1.0 11.044684370829266 -4.92989250852881 1.1164873536793218 1.0531145580550894 0.5677839396736803 0.4316223754966044 0.0741109938883305 1.8450999494301663 1.1284358732513229 0.008983471420531831 1.2526793115442396 1.175188387778355e-05 4.92989250852881 -0.485330618381409 VPSS(ph)DEEVVEEPQSR ddPTM_A549_PD325901_60min_R1 1 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VPS(0.106)S(0.894)DEEVVEEPQSR 245.39 4.992799999999999e-65 24845000.0 2127.2 1858.3 2745.9 2207.5 2106.8 2129.4 2471.2 2235.4 2712.3 2412.9 2586.4 True False 2343.151778038125 2014.905462704417 2932.2532864380833 2343.85226140375 1958.8256360654318 2112.0588724003187 2565.242868292527 2190.813193362626 2598.311463277323 2260.54908221191 2268.2891965404506 1.0330039845059675 0.8882930209152831 1.292715801367082 1.0333128002278311 0.863569618482949 0.9311241598388728 1.1309152608075654 0.9658438600792221 1.145493911111606 0.9965876862878218 1.0 11.147388873714998 -8.74325938954688 24.99949510884474 1.0687054770454094 1.0185422206628647 0.0037627356882486973 0.1188752066803642 765.2229575568149 1052265.6928421913 0.02057584315845565 0.023308547973401886 1.80609508370869e-09 8.74325938954688 -0.05016325638254471 VPST(ph)PPPK ddPTM_A549_MK2206_60min_R1 1 VPSTPPPK 8 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 VPS(0.06)T(0.94)PPPK 94.69200000000001 0.0026796999999999997 81065000.0 4922.5 5860.6 5696.9 5242.1 8071.7 6557.0 5440.8 5404.2 8780.8 8449.7 9138.9 True False 5753.297656429663 6158.87950735348 6504.806083643295 6526.414735326815 6884.363622516336 7250.857387815662 6429.322933144072 6170.261899668386 6791.962820056261 6540.906901428481 6869.458909191341 0.8375183158504299 0.8965596255496768 0.9469168051853195 0.9500624170841852 1.0021697070354483 1.0555208908978273 0.9359285815861905 0.8982165817183316 0.9887187491533881 0.9521720688476268 1.0 12.745980750551219 -5.49783766755962 1.039730184599311 0.9870709467251497 0.7954202957085205 0.5134519630648815 0.040036895985135476 0.6957895220078838 0.7574409321807635 0.006091876696251317 0.1335979123016966 3.178061758120508e-06 5.49783766755962 -0.19165065101662926 VPST(ph)PPPK ddPTM_A549_PD325901_60min_R1 2 VPSTPPPK 8 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 VPS(0.064)T(0.936)PPPK;VPS(0.056)T(0.944)PPPK 105.4 0.002106 327560000.0 26729.0 27207.0 27173.0 28968.0 29874.0 30974.0 27857.0 29936.0 31831.0 30044.0 34385.0 True False 29442.508403150176 29499.829372974807 29017.12318452312 30757.28756889868 27775.753299705117 30721.758013396975 28917.11337893532 29338.90299566231 30493.25376528426 28147.01671265888 30155.862984473933 0.9763444149586753 0.9782452383525919 0.9622381955861417 1.0199438691154152 0.9210730700695171 1.0187656718434621 0.9589217656886027 0.9729087511363131 1.0111882316544558 0.9333845536820043 1.0 14.880150901618755 -8.758248859658964 24.95554263104903 1.0052833323191646 0.9761503560467626 0.0 0.033716690583597796 84.10103059664138 657818.7053226191 0.003909688519192117 0.004342606773995004 1.7448220475338144e-09 8.758248859658964 -0.029132976272401967 VPTANVSVVDLTCR ddPTM_A549_MK2206_60min_R1 2 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 204.85 2.26e-31 14734900.0 4348.6 4497.7 4729.6 4330.0 6424.5 4497.700000000001 4033.2 4619.5 7168.9 5882.9 6346.2 False True 5082.537366937539 4726.613718770044 5400.328398462205 5390.850194381089 5479.464560483688 4973.643628668374 4765.980233413586 5274.328271625421 5545.155596380891 4553.948804148507 4770.263393790289 1.0654626269806724 0.990849630006371 1.132081806109932 1.1300948709454182 1.1486712804195685 1.0426350115473364 0.9991021123944059 1.1056681437111628 1.1624422256429952 0.9546535334037591 1.0 12.219853212616972 -11.127668779684482 1.5049636220534253 1.0002694280348625 1.0954217730971314 0.3207994308063048 0.057531129975872626 0.4702162210173816 1.9156496924285815 0.044018345647742436 0.009602946159188082 7.453001700418982e-12 11.127668779684482 0.09515234506226888 VPTANVSVVDLTCR ddPTM_A549_PD325901_60min_R1 2 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 175.74 2.0791999999999998e-22 27100000.0 6058.4 6604.4 7385.5 6727.3 7512.200000000001 7039.8 7484.8 8303.5 6115.1 6368.4 7671.599999999999 False True 6673.444308041646 7160.975966143818 7886.724442619345 7142.830042193182 6984.5689876830975 6982.470202838247 7769.638159839713 8137.88017853027 5858.103612833074 5966.298137162055 6728.041834279198 0.9918850792574774 1.0643477169923101 1.1722169149479256 1.0616506582644372 1.0381280556397405 1.0378161097724963 1.154814186834215 1.209546607910192 0.8706996414597467 0.8867807727894796 1.0 12.715970960813928 -8.773494445407266 24.99999350561604 0.9389414979029531 1.0906729957716692 0.5456728616734379 0.06931451787492292 145.8166813322742 302396.0339352236 0.01330299828896441 0.01421460132113968 1.6846339729740951e-09 8.773494445407266 0.1517314978687161 VPTTPAS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 VPTTPASPVK 10 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 VPT(0.001)T(0.078)PAS(0.921)PVK;VPT(0.001)T(0.075)PAS(0.924)PVK 100.93 0.00043843 49654000.0 6610.9 7144.200000000001 7541.900000000001 6940.299999999999 9521.6 7414.4 7039.8 7236.7 10411.2 10470.900000000001 10841.099999999999 True False 7726.65829901287 7507.809264654599 8611.454826700376 8640.673811561905 8120.985253187252 8198.986886719604 8318.840535352812 8262.524386464265 8053.079823270062 8105.516417644125 8148.955670861294 0.9481777311222274 0.9213216475702182 1.056755635264144 1.0603412462358677 0.9965676070893283 1.0061395862094586 1.0208474400098881 1.0139365975457526 0.988234584716903 0.9946693472180126 1.0 12.992399467317755 -5.7410548317676495 24.999922637348142 1.0058303252084695 0.934749640821241 0.5916022864450264 0.024809731683071885 147.10636902191152 180410.6153571993 0.0037150096334112887 0.014353167357704928 1.815286459655908e-06 5.7410548317676495 -0.07108068438722848 VPTTPAS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 VPTTPASPVK 10 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 VPTT(0.015)PAS(0.985)PVK;VPT(0.001)T(0.048)PAS(0.951)PVK 132.32 1.0073e-06 87530000.0 14851.300000000001 15769.6 14936.400000000001 15347.3 17387.7 16074.8 15031.2 16022.8 16500.2 16935.3 18623.1 True False 16358.993043050787 17098.559535416007 15950.073923869699 16295.267864752768 16166.447936308585 15943.892158382958 15603.22054138824 15703.212684356564 15806.753974991143 15866.002267803615 16332.576761557546 1.0016173982757832 1.0468990769210023 0.9765803741031143 0.997715676016745 0.9898283762767928 0.9762018811330833 0.9553434690179438 0.9614657205418845 0.967805276886618 0.9714328914190613 1.0 13.995464799833933 -5.7769304818819025 24.99514390698035 0.9812076070313406 1.0242582389498318 0.5273253819061519 0.01680242674402954 138.6176343405477 223662.80015372607 0.0025889373714941396 0.008090937342143535 1.6713581295056889e-06 5.7769304818819025 0.04305063191849123 VPTTPAS(ph)PVKNWGGFR ddPTM_A549_MK2206_60min_R1 1 VPTTPASPVKNWGGFR 16 1 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 VPTT(0.003)PAS(0.997)PVKNWGGFR 67.274 0.00063867 12827000.0 1865.7 2494.3 2113.5 2008.7 3235.8 2188.9 2467.4 2309.8 4256.4 3180.3 3428.4 True False 2180.5845480143876 2621.2492159833077 2413.22608046132 2500.831590173971 2759.818106438342 2420.5279451257734 2915.694641457079 2637.2212234658314 3292.3321960741027 2461.868021185724 2577.0336609735955 0.8461606773077885 1.017157538793268 0.9364356069565699 0.9704303160825476 1.070928233586088 0.9392690447866736 1.1314150395519236 1.0233553652805207 1.2775666247332873 0.9553107739600257 1.0 11.33149566633091 -7.744246448099468 1.3705574182428992 1.1280063142351497 0.9613138969145245 0.14331982592863957 0.10134650180624563 0.3844325016397921 1.4672141051260201 0.019097358203065896 0.030791666458791122 1.801994876741619e-08 7.744246448099468 -0.16669241732062523 VPTTPAS(ph)PVKNWGGFR ddPTM_A549_PD325901_60min_R1 2 VPTTPASPVKNWGGFR 16 1 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 VPTT(0.099)PAS(0.9)PVKNWGGFR;VPT(0.255)T(0.215)PAS(0.53)PVKNWGGFR 95.205 1.6843000000000001e-06 35787000.0 10203.3 9478.9 9643.400000000001 12185.5 10384.9 12305.2 8927.7 9503.2 14587.7 12023.099999999999 12385.3 True False 11239.131504727533 10277.720169202437 10297.859114475039 12938.170659721573 9655.500449960084 12204.990530976065 9267.448508924896 9313.65122088382 13974.62969909325 11263.959414124913 10861.98661688541 1.0347215386231314 0.9462099827323756 0.9480640584169556 1.1911422022568734 0.8889258282596488 1.1236425675578443 0.853200140618684 0.8574537558723707 1.2865629642158745 1.0370072999919389 1.0 13.40700037037265 -8.755465164054907 24.99944202542652 1.135321399129349 0.982708847641951 0.17095638885751996 0.12085030995164207 168.76039833631097 706187.3962086615 0.023273974308804957 0.02605483649921643 1.7560417454486939e-09 8.755465164054907 -0.15261255148739794 VPVDVAYR ddPTM_A549_PD325901_60min_R1 1 VPVDVAYR 8 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;A0A075B730;P58107;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC;EPPK1 Plectin;Epiplakin 0 75.243 0.013505000000000001 2505300.0 1841.5 1579.5 1077.8 1510.6 1770.8 1713.6 1164.3 1284.0 1412.6 1774.3 2147.5 False True 2028.4477243593508 1712.610008255732 1150.9459893379099 1603.9063311784835 1646.4251169283593 1699.645009742269 1208.6080736294061 1258.3896127214857 1353.233334448825 1662.2703951960673 1883.3711141241174 1.0770302831700287 0.9093322051146571 0.6111095050287898 0.8516145963746491 0.8741904899046131 0.9024482732032915 0.6417259267520851 0.6681580721315851 0.7185165601725612 0.8826037432187784 1.0 10.879101592502101 -10.90624600487428 1.2068313476829198 0.9979988139463147 0.7941156201996109 0.10474370541775302 0.13640955560580714 0.5517559393848193 1.4495934873948209 0.09087966774001008 0.02253200705881234 1.2409491763357871e-11 10.90624600487428 -0.20388319374670383 VPVHDVTDASK ddPTM_A549_MK2206_60min_R1 1 VPVHDVTDASK 11 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 70.488 0.0032383000000000004 2472500.0 2061.2 2477.2 2051.6 2059.6 2632.4 2397.5 2259.6 1851.0 3883.6 3002.1 3382.2 False True 2409.080168498286 2603.2788990233134 2342.5477296779973 2564.2020924589565 2245.177447119195 2651.2018586683002 2670.140071263845 2113.384918449757 3003.970800834834 2323.9235249509998 2542.306396028729 0.9475963134347016 1.0239831450252526 0.9214262031269049 1.008612532487992 0.8831262237416894 1.0428333354349713 1.050282560526458 0.8312864734758253 1.181592748036688 0.914100491027022 1.0 11.31192219753575 -8.774290205121316 24.99996119738281 1.0857521176277798 0.9685901302725664 0.013638147762693786 0.09129404846163058 217.28489602924117 422704.0536822897 0.014913786498236653 0.015926371144948038 1.6815500368578337e-09 8.774290205121316 -0.11716198735521344 VPVLIS(ph)PTLK ddPTM_A549_MK2206_60min_R1 1 VPVLISPTLK 10 0 P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5 P42684-2 ABL2 Abelson tyrosine-protein kinase 2 1 VPVLIS(0.894)PT(0.106)LK 47.288000000000004 0.033463 32334000.0 1386.3 1425.5 1414.3 1435.6 1968.0 1597.3 1113.6 1389.5 1847.1 1740.7 2059.7 True False 1620.2735482190828 1498.0518611972116 1614.8690066697177 1787.322064446532 1678.5098069938358 1766.325225798072 1315.9267053281192 1586.4658801652838 1428.7347992125922 1347.4746610313457 1548.2196451718928 1.046539845474697 0.9675964685429945 1.0430490348741344 1.1544370141667415 1.0841548305037025 1.1408750892073611 0.8499612502863035 1.0247033649990565 0.9228243574276345 0.8703381753573737 1.0 10.596394445111661 -7.748081551267692 24.998618045489557 0.9604439837673959 1.0708724523441346 0.4885463075384775 0.0684415452816613 179.9176868681503 336707.52389613923 0.009968091117892632 0.014737902106109752 1.786152141972751e-08 7.748081551267692 0.11042846857673871 VPVPGPGS(ph)GGNGPER ddPTM_A549_MK2206_60min_R1 2 VPVPGPGSGGNGPER 15 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER 115.26 1.0378e-06 32168000.0 16449.8 16413.6 14119.7 12684.2 17614.8 15690.8 13412.9 13233.9 22164.0 23177.0 23551.0 True False 19226.124081002883 17248.982131846056 16122.0857763377 15791.829569415379 15023.686254184457 17351.190041289912 15849.850310610225 15109.845852118993 17143.8893886351 17941.29960287442 17702.63672546644 1.0860599118178142 0.9743736144702234 0.9107166365304774 0.8920608728697327 0.8486694093751508 0.9801472125521873 0.8953383926027891 0.8535364582374589 0.9684370557055184 1.0134817700385077 1.0 14.111676638583551 -8.977419629272655 16.614962744230606 0.9860782037570446 0.9264368932629412 0.16422238359345664 0.06421924006133782 5.4617510082493075 4019.3368208421016 0.011371815224775386 0.011737610629768086 1.0533686059496068e-09 8.977419629272655 -0.05964131049410337 VPVPGPGS(ph)GGNGPER ddPTM_A549_PD325901_60min_R1 2 VPVPGPGSGGNGPER 15 0 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER 142.57 1.7333e-13 58877000.0 22185.0 24420.0 23309.0 24036.0 30282.0 22547.0 23888.0 23747.0 26637.0 29058.0 28330.0 True False 24437.20486826618 26477.959101997447 24890.88890840352 25520.64913028335 28155.096787228686 22363.384707434037 24797.070912015173 23273.347455838888 25517.539522662697 27223.2729209307 24845.589598666473 0.983563089586644 1.0657005742145313 1.001823233437756 1.0271701956975539 1.1332030047191894 0.9000947479481163 0.9980471911741671 0.9367194673894166 1.0270450383689944 1.0956984060620498 1.0 14.600702157741736 -7.256726284722568 24.99743325111567 0.9984617000942323 1.0405041198702607 0.14531253627321739 0.05870335114642858 637.1839952648043 3379498.789550164 0.007390589127622299 0.012542745174969257 5.536989695493599e-08 7.256726284722568 0.042042419776028406 VPVPGPGS(ph)GGNGPEREGPEEPGLAK ddPTM_A549_MK2206_60min_R1 1 VPVPGPGSGGNGPEREGPEEPGLAK 25 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPVPGPGS(1)GGNGPEREGPEEPGLAK 100.06 1.201e-10 10532000.0 2607.9 2844.0 2751.5 2572.9 3709.2 2974.4 2410.7 2146.8 4686.7 4736.6 4962.6 True False 3048.049762966563 2988.7474522938437 3141.704073995423 3203.2606155018707 3163.581593547529 3289.1490337530754 2848.692985393767 2451.115474299266 3625.1699331220025 3666.5987702884304 3730.2494592076705 0.8171168701446548 0.8012191905601598 0.8422235854067363 0.8587255760053818 0.8480884799108032 0.881750421713542 0.7636735871275612 0.6570915701760867 0.971830429242127 0.982936613324311 1.0 11.865056398125887 -8.923951416775664 13.142546062896363 0.9875808726883893 0.8134923126453387 0.6530213605164135 0.057216150972423954 0.37206434825630685 63.39124750669751 0.010242899141275292 0.010900131989509815 1.1913752761607826e-09 8.923951416775664 -0.17408856004305062 VPVPGPGS(ph)GGNGPEREGPEEPGLAK ddPTM_A549_PD325901_60min_R1 2 VPVPGPGSGGNGPEREGPEEPGLAK 25 1 J3KPS2;A0A494C1T9;Q6ZRV2 J3KPS2 FAM83H Protein FAM83H 1 VPVPGPGS(1)GGNGPEREGPEEPGLAK;VPVPGPGS(1)GGNGPEREGPEEPGLAK 136.66 1.5219999999999997e-24 33770000.0 5816.5 5112.799999999999 5763.5 6415.799999999999 6825.200000000001 7214.7 6658.8 7156.200000000001 8372.4 7687.4 8331.7 True False 6406.986798119014 5543.673599373161 6154.645768740995 6812.089394661004 6345.821497661758 7155.945875226164 6912.204277835174 7013.463977069708 8020.537143805278 7202.016252060105 7306.953718997861 0.8768341835067383 0.758684646511415 0.8422998154126938 0.9322748790579822 0.8684633489826017 0.9793336800014101 0.9459761952321731 0.9598341862813379 1.0976581284416953 0.9856386846046498 1.0 12.835054354249008 -7.302766027633549 0.6816845339799116 1.0433168041046044 0.8178752703276511 0.6549455877495756 0.05112262941427408 0.2937906802159305 0.2639319865683404 0.01104120243655378 0.03021385012207329 4.980053087398944e-08 7.302766027633549 -0.2254415337769533 VPVSKT(ph)PK ddPTM_A549_MK2206_60min_R1 1 VPVSKTPK 8 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 VPVS(0.253)KT(0.747)PK 41.117 0.036492000000000004 11356000.0 2653.3 2716.2 2524.2 2045.1 3607.0 2662.1 2289.4 2106.2 3008.8 3515.6 3457.6 True False 3101.112173043134 2854.4429781717763 2882.169516110936 2546.149591808027 3076.4150781640074 2943.801655041038 2705.3543455263994 2404.7602999669803 2327.3116040662903 2721.4235183097594 2598.9824950945936 1.1932024085950086 1.098292498529462 1.1089607265731258 0.9796716971405982 1.1836998071247251 1.1326746757999593 1.0409282673633145 0.9252699102459541 0.8954702882604774 1.0471111380881808 1.0 11.34373120153289 -8.04115907430505 3.561005086424068 0.9476694166841684 1.1112302998537504 0.5289419922777321 0.0646900213232369 0.12456048044870167 3.252919635095786 0.01022721156559095 0.013739413827888802 9.095800486972748e-09 8.04115907430505 0.16356088316958206 VQAEDEANGLQTTPAS(ph)R ddPTM_A549_MK2206_60min_R1 2 VQAEDEANGLQTTPASR 17 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 VQAEDEANGLQT(0.001)T(0.021)PAS(0.978)R;VQAEDEANGLQTT(0.005)PAS(0.995)R 192.62 5.267699999999999e-40 32437000.0 3507.0 3231.3999999999996 3535.8999999999996 3899.6 5453.799999999999 3696.5 3160.0 4042.6 5815.3 4608.0 4741.0 True False 4098.895862082034 3395.8644575746553 4037.343788929825 4855.002175059698 4651.553244605176 4087.6611764618883 3734.1310962974676 4615.650929943266 4498.143835125865 3567.04959960501 3563.6788550565334 1.1501866550814692 0.9529097866818822 1.1329145956014541 1.3623568151128138 1.3052672347299332 1.1470341023186958 1.0478304157511493 1.2951927257401663 1.2622191892357 1.0009458609166462 1.0 11.79915161728714 -10.926824084677719 1.1987398200021775 1.000592955650007 1.1894366826337972 0.27638483832496896 0.11388919251145259 0.5490647465888865 1.4090824913089395 0.08447291980207247 0.020180841360058627 1.1835208556022555e-11 10.926824084677719 0.18884372698379015 VQAEDEANGLQTTPAS(ph)R ddPTM_A549_PD325901_60min_R1 2 VQAEDEANGLQTTPASR 17 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 VQAEDEANGLQT(0.001)T(0.045)PAS(0.954)R;VQAEDEANGLQTT(0.023)PAS(0.977)R 214.66 3.7372e-55 36301000.0 7972.0 7563.7 6750.7 7337.8 8156.5 6675.1 7617.400000000001 7619.1 7758.3 7110.4 8734.9 True False 8781.311571323777 8201.119543807461 7208.843097256847 7791.039240647085 7583.615578397423 6620.740198722349 7907.284325401226 7467.131073431681 7432.245631215005 6661.448130531548 7660.562675093246 1.1463011196128474 1.070563598477136 0.9410331072278707 1.0170322430724386 0.9899554249525298 0.8642629111629532 1.0322067269431976 0.9747496874752467 0.970195786711521 0.8695768722302717 1.0 12.903234647928947 -5.5450579575302354 3.7499639745088054 0.9800839128649977 1.1361192231125554 0.5174986970241622 0.05415008877126703 0.10089970263079776 2.965859683273841 0.005528053687208075 0.02966078667855601 2.850637818386698e-06 5.5450579575302354 0.15603531024755768 VQAGPGS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VQAGPGSPR 9 0 Q6PK04;I3L0U5;I3L4F6 Q6PK04 CCDC137 Coiled-coil domain-containing protein 137 1 VQAGPGS(1)PR;VQAGPGS(1)PR 84.198 0.0013725 1594590000.0 2857.9 3079.5 2914.1 2509.1 3030.2 2943.5 2452.25 2449.19 3821.7 4302.7 4003.3 True False 3340.243651053392 3236.233396392014 3327.3631989932983 3123.82961263778 2584.4615940816684 3254.979216262832 2897.7920825618535 2796.3701828298003 2956.091052000845 3330.7170816450707 3009.1701245407753 1.1100215384343355 1.0754571069277417 1.105741138348262 1.038103358517991 0.8588619078079139 1.0816866715900848 0.962987123569187 0.9292828477939744 0.9823608934213945 1.1068556923658035 1.0 11.555149956934274 -6.523737348417924 24.99985050534402 0.9824421043599729 1.0910800941443224 0.3524019447332636 0.06391100444036546 17.402890244982018 506725.37569355976 0.006836951475228684 0.014326269308486957 2.994074838615816e-07 6.523737348417924 0.10863798978434946 VQAGPGS(ph)PR ddPTM_A549_PD325901_60min_R1 4 VQAGPGSPR 9 0 Q6PK04;I3L0U5;I3L4F6 Q6PK04 CCDC137 Coiled-coil domain-containing protein 137 1 VQAGPGS(1)PR;VQAGPGS(1)PR;VQAGPGS(1)PR;VQAGPGS(1)PR 132.25 4.8011000000000005e-05 2254121400.0 13154.68 13477.01 13163.66 13709.38 15956.92 12661.44 12530.65 13716.58 13756.930000000002 14115.17 14083.15 True False 14490.13342963642 14612.764930270701 14057.025127118084 14556.177266338986 14836.160987585545 12558.329430527052 13007.510742784774 13442.992051451154 13178.774073112745 13223.935757290012 12351.011830443327 1.1731940369387786 1.1831228996358423 1.1381274117533997 1.178541277926742 1.201210167333555 1.016785474982116 1.053153451826779 1.0884122075177893 1.0670197919031308 1.0706763088587659 1.0 13.592341615931645 -7.263120851830914 24.997815721056604 1.0379786511798446 1.1734655005526313 0.8287220318975168 0.028148187359466764 50.54382177578581 751418.3831430699 0.005016674556210424 0.008278929861677064 5.4560601329322416e-08 7.263120851830914 0.13548684937278677 VQAGPGS(ph)PRR ddPTM_A549_PD325901_60min_R1 1 VQAGPGSPRR 10 1 Q6PK04;I3L0U5;I3L4F6 Q6PK04 CCDC137 Coiled-coil domain-containing protein 137 1 VQAGPGS(1)PRR 75.08800000000001 0.00065624 130780000.0 1810.0 1808.3 1694.2 1521.1 1853.7 2007.6 1731.4 1824.3 1961.2 1950.4 2126.4 True False 1993.7498675484244 1960.691787229401 1809.1786000522231 1615.0548923312538 1723.5025069178332 1991.2507712176578 1797.2893744584342 1787.9129053643353 1878.7775842567137 1827.251411142653 1864.8662803601967 1.0691114363241818 1.0513846530865987 0.9701385129355132 0.866043270415779 0.9241962949670262 1.0677713422074693 0.9637631359344917 0.9587351780627413 1.0074596790359842 0.9798297231208029 1.0 10.864856470865087 -8.810590914845749 24.984902674447213 1.0035226395675767 0.9818908706576995 0.002476411512134624 0.05889419200203901 404.46335817218494 205596.81003851997 0.0106652817928758 0.011354077245188415 1.5467106829265349e-09 8.810590914845749 -0.02163176890987717 VQAMQIS(ph)SEKEEDDNEK ddPTM_A549_MK2206_60min_R1 1 VQAMQISSEKEEDDNEK 17 1 H0Y8K3;Q9UKY7-2;Q9UKY7 H0Y8K3 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.5)S(0.5)EKEEDDNEK 137.43 4.0321e-13 4997600.0 5763.8 6277.3 5890.0 5288.8 8346.2 6861.7 6369.2 6257.2 8511.4 8974.2 9139.7 True False 6736.588528619456 6596.787757483871 6725.2905672662355 6584.556237423256 7118.485036144284 7587.80053957217 7526.401195739822 7144.177261871327 6583.581489912862 6946.921987147419 6870.060247112465 0.980571972633121 0.960222693863063 0.9789274511956315 0.958442284431318 1.0361604964288682 1.1044736533076804 1.0955364181708918 1.0399002344810695 0.9583004010306879 1.0111879280923715 1.0 12.746107035500115 -6.74141594490297 24.899110928813712 1.006106348415306 0.9695459494988011 0.18360321465165796 0.04521410190095634 494.29218683179863 614648.6860746961 0.008173540161460189 0.016997869139928797 1.813777687714703e-07 6.74141594490297 -0.03656039891650498 VQAMQIS(ph)SEKEEDDNEKR ddPTM_A549_MK2206_60min_R1 3 VQAMQISSEKEEDDNEKR 18 2 H0Y8K3;Q9UKY7-2;Q9UKY7 H0Y8K3 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.537)S(0.463)EKEEDDNEKR;VQAMQIS(0.5)S(0.5)EKEEDDNEKR;VQAMQIS(0.559)S(0.441)EKEEDDNEKR 106.35 9.7635e-10 34214300.0 10961.4 12224.3 10901.3 10220.119999999999 14061.1 12608.1 10208.8 12031.9 16126.0 15644.8 16478.6 True False 12811.41633949986 12846.464655793117 12447.268261619589 12724.049858798624 11992.730816626543 13942.28077342057 12063.606815152396 13737.458671148377 12473.486747930407 12110.62881421451 12386.508833776548 1.0343040570531576 1.0371336127224424 1.00490529080134 1.027250699091389 0.968209119903405 1.1256021337829765 0.9739311517912427 1.1090662312925452 1.007021987819254 0.9777273787744173 1.0 13.596481997380511 -8.966391082807622 24.999849052430182 1.0030978514638145 1.0341977127364737 0.12382065053601277 0.04623537742341575 303.19444155779047 225530.90961150257 0.007131318245664249 0.007551055674611272 1.0804605568016839e-09 8.966391082807622 0.03109986127265918 VQAMQIS(ph)SEKEEDDNEKRQDPGDNWEEGGGGGGGMEK ddPTM_A549_MK2206_60min_R1 1 VQAMQISSEKEEDDNEKRQDPGDNWEEGGGGGGGMEK 37 3 H0Y8K3;Q9UKY7-2;Q9UKY7 H0Y8K3 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK 112.29 1.5974e-15 11833000.0 1497.7 1151.6 1308.8 870.07 2485.8 1612.6 1424.0 1459.3 2802.5 2045.1 2634.2 True False 1750.475144750574 1210.2115211187017 1494.4075202781055 1083.2371890589268 2120.1421129193477 1783.2442616427547 1682.7223674454415 1666.1602439188175 2167.7382246728866 1583.1104896163638 1980.0554397785102 0.8840536025326557 0.6112008264041721 0.7547301405082226 0.5470741714080987 1.0707488640603455 0.9006031981822838 0.8498359862255531 0.8414715115780773 1.0947866312851173 0.7995283656266974 1.0 10.95132510970121 -7.461483319856416 0.6301962787440473 1.040049174321999 0.7024294650508681 0.15130362725310742 0.15095656262032173 0.49089497019131856 0.38327059812019004 0.028407763937160196 0.07103445518533587 3.455546011940379e-08 7.461483319856416 -0.33761970927113094 VQAMQIS(ph)SEKEEDDNEKRQDPGDNWEEGGGGGGGMEK ddPTM_A549_PD325901_60min_R1 3 VQAMQISSEKEEDDNEKRQDPGDNWEEGGGGGGGMEK 37 3 H0Y8K3;Q9UKY7-2;Q9UKY7 H0Y8K3 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK;VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK;VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK 177.69 2.4011999999999997e-66 51209000.0 5675.0 6305.1 5490.2 5418.9 4840.8 5824.6 4784.5 5198.3 7777.4 7313.700000000001 8597.2 True False 6251.121822285806 6836.452904750373 5862.797987254583 5753.613145785176 4500.798907853399 5777.1663887399745 4966.576765678861 5094.615828512538 7450.542924637038 6851.911733836148 7539.7989021410285 0.8290833619595233 0.9067155495100896 0.7775801534427876 0.7630990190138042 0.5969388529149413 0.7662228746047152 0.6587147522288074 0.6756965132141459 0.9881620214726622 0.9087658467774856 1.0 12.880310329806843 -8.77260409605971 24.952812425036058 0.9944098757233854 0.7463808172408933 0.5711855447711116 0.08345562279859418 93.26489118708109 208443.63924244416 0.014658177093513495 0.01567393880037324 1.6880911923538165e-09 8.77260409605971 -0.24802905848249202 VQAMQISS(ph)EKEEDDNEK ddPTM_A549_PD325901_60min_R1 1 VQAMQISSEKEEDDNEK 17 1 H0Y8K3;Q9UKY7-2;Q9UKY7 H0Y8K3 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.202)S(0.798)EKEEDDNEK 109.37 1.9525e-09 9977200.0 8005.1 8275.4 8070.8 7901.6 9556.5 7560.5 7574.8 7636.3 7880.1 8613.5 9011.8 True False 8817.771858956849 8972.797000518827 8618.533021663017 8389.66388616438 8885.284408135229 7498.929794675785 7863.063159089607 7483.9880059385405 7548.926800785909 8069.642140010895 7903.405730506966 1.1156926722008527 1.135307651723362 1.0904834340461196 1.0615251414691351 1.1242348819115071 0.9488225773010851 0.9948955459465231 0.946932026664216 0.955148585077345 1.0210335158249892 1.0 12.948258757156227 -7.259842020482581 24.999999682647182 0.9751344273933924 1.103835979374223 0.8389657045137765 0.02782789816059143 40.068643732952275 627107.0129308477 0.00401038110573816 0.006723647241403251 5.4974081191296167e-08 7.259842020482581 0.12870155198083055 VQAMQISS(ph)EKEEDDNEKR ddPTM_A549_MK2206_60min_R1 2 VQAMQISSEKEEDDNEKR 18 2 H0Y8K3;Q9UKY7-2;Q9UKY7 H0Y8K3 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.167)S(0.833)EKEEDDNEKR;VQAMQIS(0.048)S(0.952)EKEEDDNEKR 90.884 1.142e-06 37561000.0 8371.5 8163.299999999999 7210.1 7482.599999999999 11034.099999999999 7836.7 7928.0 8665.9 10805.5 11158.0 10581.1 True False 9784.40453647556 8578.777101726551 8232.600597461163 9315.837335906677 9410.998506783886 8665.974392419554 9368.414978305793 9894.317863205699 8358.07150283778 8637.400050432445 7953.5208464962425 1.2301978866109184 1.0786137695868054 1.0350888312674587 1.1712847072011605 1.1832493669680522 1.0895771268691863 1.1778953194587845 1.244017342025882 1.0508643485255658 1.0859844611129008 1.0 12.95737793541398 -8.944538626170095 8.84934855242634 1.02231392055387 1.1457973161174588 0.34429634320026614 0.0634914335249754 0.196208828507568 28.85423365591383 0.010809528841134742 0.011445646751081432 1.1362172379627252e-09 8.944538626170095 0.12348339556358878 VQAMQISS(ph)EKEEDDNEKR ddPTM_A549_PD325901_60min_R1 4 VQAMQISSEKEEDDNEKR 18 2 H0Y8K3;Q9UKY7-2;Q9UKY7 H0Y8K3 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.286)S(0.714)EKEEDDNEKR;VQAMQIS(0.195)S(0.805)EKEEDDNEKR;VQAMQIS(0.26)S(0.74)EKEEDDNEKR;VQAMQIS(0.192)S(0.808)EKEEDDNEKR 137.72 9.4642e-14 139505000.0 31625.5 30256.9 33822.5 32707.7 38262.100000000006 29224.9 31409.0 31193.4 34330.9 35472.5 38266.799999999996 True False 34836.0974785374 32806.755149599776 36117.89824121491 34727.98034442373 35574.70209307915 28986.902103884724 32604.286682664282 30571.223166251108 32888.091661920655 33232.76029622528 33560.22619323155 1.0380173625159643 0.9775486899494218 1.0762114067186828 1.0347957771341747 1.0600256949476066 0.8637278526367865 0.9715157012034661 0.9109361477550688 0.9799722884035134 0.9902424407058282 1.0 15.034464819008763 VQAMQISS(ph)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK ddPTM_A549_PD325901_60min_R1 1 VQAMQISSEKEEDDNEKRQDPGDNWEEGGGGGGGMEK 37 3 H0Y8K3;Q9UKY7-2;Q9UKY7 H0Y8K3 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.46)S(0.54)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK 64.563 0.00011602 21524000.0 4112.8 3846.8 4103.2 4222.9 4086.1 4301.0 3780.8 4389.7 4881.1 5124.4 5052.9 True False 4530.328428316662 4170.983336345773 4381.667826546029 4483.738942098251 3799.1064322797447 4265.974081992005 3924.6804129331435 4302.143989846969 4675.964341482484 4800.844509464424 4431.425332972179 1.0223185742538843 0.9412283910802743 0.9887716699058591 1.0118051428593033 0.8573102662956673 0.9626641004759513 0.8856474199692407 0.9708262390966429 1.0551829242593358 1.0833635114516245 1.0 12.113555089554218 -8.610601385282903 6.142110598591068 1.025851747301138 0.951091579625055 0.37629675937787 0.050769408605497966 0.17956814100439894 10.246850800337418 0.008191576112757995 0.009293547673930234 2.451312132502785e-09 8.610601385282903 -0.07476016767608296 VQAYEEPSVAS(ph)SPNGK ddPTM_A549_PD325901_60min_R1 1 VQAYEEPSVASSPNGK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.5)S(0.5)PNGK 289.32 4.529399999999999e-124 196030000.0 9748.7 9862.2 10990.0 10895.0 12717.0 9708.4 10303.0 11198.0 10492.0 11681.0 11824.0 True False 10738.380847386365 10693.322205393915 11735.847488238656 11567.959405659725 11823.801791268328 9629.338009209758 10695.08630301793 10974.647105338936 10051.057726912832 10943.45966650807 10369.722958511551 1.0355513730067607 1.0312061612616903 1.1317416612953752 1.1155514425932327 1.140223498600149 0.928601279680854 1.0313762812958582 1.0583356131352437 0.9692696484878455 1.0553280652040555 1.0 13.340089730622426 -7.256581348282992 24.99944796765934 0.991489689338658 1.09118453719187 0.4042312088633535 0.04860945553795408 255.0025087172526 1312242.5713780043 0.006812404427649036 0.011562833377550692 5.538837855051824e-08 7.256581348282992 0.09969484785321203 VQAYEEPSVAS(ph)SPNGKESDLRR ddPTM_A549_MK2206_60min_R1 1 VQAYEEPSVASSPNGKESDLRR 22 2 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.505)S(0.389)PNGKES(0.106)DLRR 80.132 2.2824e-05 25506000.0 3845.7 4889.5 3933.8 4091.7 5729.2 4162.2 3992.3 4653.2 6816.6 5814.4 6654.0 True False 4494.76014166207 5138.354665256941 4491.6719921072845 5094.166683683392 4886.442269425346 4602.641241355245 4717.649232831762 5312.80534982734 5272.650983873399 4500.92300172382 5001.628158942452 0.8986593962659642 1.027336399662185 0.89804196740947 1.0185016802129703 0.976970321292045 0.9202285925886244 0.9432227032705417 1.0622151789369891 1.0541869200025162 0.8998915670443399 1.0 12.28818209044361 -8.251906553911185 24.830427659957074 1.0290502525849567 0.9573062345335613 0.09042679389427954 0.05785423290642136 481.07451046187083 1253069.0834870804 0.006789533290977576 0.008713326665052906 5.598780561371321e-09 8.251906553911185 -0.07174401805139541 VQAYEEPSVAS(ph)SPNGKESDLRR ddPTM_A549_PD325901_60min_R1 1 VQAYEEPSVASSPNGKESDLRR 22 2 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPS(0.023)VAS(0.479)S(0.479)PNGKES(0.018)DLRR 79.408 4.036e-05 8595800.0 3492.3 4429.1 3413.7 5181.8 3710.7 5245.8 4304.9 3840.6 5787.8 5150.6 5103.1 True False 3846.835725104621 4802.3558009278 3645.374210245704 5501.868017278347 3450.0732332200478 5203.079944039448 4468.72532523167 3763.9962201075873 5544.558893616668 4825.3902369931075 4475.451051216196 0.8595414587450911 1.0730439783544876 0.8145266630175924 1.2293438034102113 0.7708883850450104 1.162582248022916 0.998497195945714 0.8410317031810074 1.2388827025847917 1.078190819600589 1.0 12.127817374091569 -8.763857434383537 24.999998567047868 1.1128057113158585 0.9765749589776281 0.14444555045143215 0.14731903922995251 89.59874077288984 926348.3151123333 0.025229267774586683 0.02747898092598104 1.7224339046440449e-09 8.763857434383537 -0.13623075233823034 VQAYEEPSVASS(ph)PNGK ddPTM_A549_MK2206_60min_R1 3 VQAYEEPSVASSPNGK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.039)S(0.961)PNGK;VQAYEEPSVAS(0.163)S(0.837)PNGK;VQAYEEPSVAS(0.008)S(0.992)PNGK 286.23 1.5708999999999998e-107 239571000.0 23296.6 23636.9 23826.7 20740.6 32492.0 25811.9 22534.4 23686.2 34978.9 36535.6 36120.1 True False 27228.49653281446 24839.917248637234 27205.68433940276 25822.047931080906 27712.469841892136 28543.29812544747 26628.608790001774 27043.791385945267 27056.234999825305 28282.1825849238 27150.482305953916 1.002873401141881 0.9148978264445051 1.0020331879495465 0.951071426286166 1.0206989890494498 1.0512998555163096 0.9807784808361324 0.9960703858293798 0.9965287060072615 1.0416825110588077 1.0 14.728690206095754 -6.758306879996707 24.999946123473773 1.0021578570953127 0.9663970380165036 0.29583217793061434 0.030657777634313876 80.89460270175378 645592.0085041226 0.0037476527710426774 0.007553644739487933 1.7445889605233362e-07 6.758306879996707 -0.035760819078809125 VQAYEEPSVASS(ph)PNGK ddPTM_A549_PD325901_60min_R1 3 VQAYEEPSVASSPNGK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.089)S(0.911)PNGK;VQAYEEPSVAS(0.149)S(0.851)PNGK;VQAYEEPSVAS(0.211)S(0.789)PNGK 226.79 6.230600000000001e-55 221486500.0 13465.6 14769.7 14920.099999999999 14280.1 15987.1 13805.5 14980.9 15557.300000000001 16030.3 16427.5 17140.3 True False 14832.617799149213 16014.394453266656 15932.667707849827 15162.149344539837 14864.221248500891 13693.072585198937 15551.006347363023 15246.997447034248 15356.602237869869 15390.264846465312 15032.151761313893 0.9867261876188483 1.0653427870839236 1.0599059908943618 1.0086479690526076 0.9888285778723189 0.9109189956715875 1.0345163217008249 1.0142924106363316 1.021583768026542 1.02382314194519 1.0 13.87576391662693 -6.389457186152626 6.642323533688259 1.0035661442334538 1.0399472875050733 0.16680503832985372 0.036309006835000324 0.33586871877651947 16.706456285929274 0.005054728306269224 0.01182326838677557 4.0788977059350915e-07 6.389457186152626 0.036381143271619454 VQAYEEPSVASS(ph)PNGKESDLR ddPTM_A549_PD325901_60min_R1 2 VQAYEEPSVASSPNGKESDLR 21 1 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.024)S(0.976)PNGKESDLR;VQAYEEPSVAS(0.164)S(0.836)PNGKESDLR 248.47 1.7780999999999997e-98 200347000.0 16322.300000000001 17808.8 17642.6 18128.699999999997 19394.9 24745.0 20902.0 22869.5 25099.0 22074.0 23119.0 True False 17979.327880157824 19309.610075989036 18839.932929572286 19248.468625735055 18032.669132772662 24543.484924178592 21697.43704801327 22413.34988172432 24044.176314123637 20680.2438728276 20275.509563415802 0.8867509753046551 0.9523612718878547 0.929196520099608 0.9493457397719911 0.8893817971070863 1.2104990430654197 1.0701302958700052 1.105439535890429 1.1858728501456675 1.0199617330526716 1.0 14.307450552210252 -7.2446237170433525 24.927457740764766 1.0974893297335382 0.9251117943538264 0.6761269164148536 0.06105434596013869 461.61449273590017 684295.351362372 0.011019901131343893 0.019055476941832388 5.693460119840749e-08 7.2446237170433525 -0.1723775353797118 VQAYEEPSVASS(ph)PNGKESDLRR ddPTM_A549_MK2206_60min_R1 1 VQAYEEPSVASSPNGKESDLRR 22 2 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.185)S(0.814)PNGKES(0.001)DLRR 131.42 1.8205000000000003e-22 27956000.0 4288.4 5357.2 5074.5 4588.8 6266.4 4815.1 5732.5 4801.7 7780.2 7411.5 7207.6 True False 5012.177078686227 5629.85859754872 5794.140404684636 5713.056205999059 5344.6208610498825 5324.630685995301 6774.021047318113 5482.355679589523 6017.997122426403 5737.237002489699 5417.754000359727 0.9251392880432425 1.0391499128928539 1.0694727749358717 1.0545063887396373 0.9865012070860012 0.9828114539053928 1.25033751013212 1.0119240702375019 1.1107918746452536 1.0589696398376078 1.0 12.403479172384674 VQDGLS(ph)DIAEK ddPTM_A549_PD325901_60min_R1 1 VQDGLSDIAEK 11 0 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1 P46100-4 ATRX Transcriptional regulator ATRX 1 VQDGLS(1)DIAEK 70.889 0.0028015 2008600.0 2774.6 2497.6 2716.8 2949.8 3116.5 2703.8 2732.7 2492.5 2729.5 2745.1 3286.7 True False 3056.275349447437 2708.081517327963 2901.1783854455684 3132.002446518132 2897.6077913413333 2681.781149242033 2836.694393890817 2442.7851321715752 2614.788607091933 2571.773917518303 2882.4567361079085 1.0603022453597102 0.9395046535840121 1.0064950322074702 1.0865739656329334 1.0052562992684784 0.9303803646548945 0.984123840734941 0.8474663649141155 0.9071388910497927 0.8922159647020025 1.0 11.493083238741741 -7.170261446346085 5.370716518074742 0.9468439101286419 1.0192090115225165 0.40036550054477704 0.05371239917309179 0.2459187754959722 11.327937822831506 0.00850807550089777 0.01487580363801406 6.75676094262239e-08 7.170261446346085 0.07236510139387464 VQDLSAGGQGSLTDSGPERRPEGPGAQAPS(ph)SPR ddPTM_A549_PD325901_60min_R1 2 VQDLSAGGQGSLTDSGPERRPEGPGAQAPSSPR 33 2 P40222 P40222 TXLNA Alpha-taxilin 1 VQDLSAGGQGSLTDSGPERRPEGPGAQAPS(0.595)S(0.405)PR;VQDLSAGGQGSLTDS(0.01)GPERRPEGPGAQAPS(0.495)S(0.495)PR 206.66 1.0565999999999997e-89 88672000.0 4520.2 4016.5 4531.5 5610.1 4852.7 6043.6 5415.6 5107.6 6335.7 7299.700000000001 6192.3 True False 4979.087376404633 4354.984550907974 4839.034840123159 5956.62313553847 4511.863092906172 5994.382925349196 5621.693621530031 5005.724911165316 6069.432561990244 6838.795696225408 5430.686356223871 0.9168431114970061 0.801921574041358 0.8910540073037643 1.0968453607547866 0.8308089985228706 1.1037984026603371 1.0351718462045327 0.9217481148452763 1.1176179517409128 1.2592875462947266 1.0 12.40691882894302 -6.3549848966956 0.6951161459600756 1.047313372621936 0.8326757516611766 0.3343944542133287 0.10867117406523437 0.8590744514151171 0.5992061498228252 0.015344881317280302 0.10900992373714023 4.415858039583932e-07 6.3549848966956 -0.21463762096075933 VQDSAPVET(ph)PR ddPTM_A549_MK2206_60min_R1 2 VQDSAPVETPR 11 0 P09601 P09601 HMOX1 Heme oxygenase 1 1 VQDSAPVET(1)PR;VQDSAPVET(1)PR 103.85 0.00021674 37981000.0 3526.7 3689.5 3617.6000000000004 3155.6 3966.7 2980.9 2518.52 3392.9 3991.2000000000003 4487.7 4846.799999999999 True False 4121.920740463277 3877.279790871352 4130.630077443518 3928.7221416602683 3383.2036846557166 3296.336859438725 2976.1024837490822 3873.8539653204652 3087.1995726367263 3473.9254531569895 3643.20579512508 1.1313993697470395 1.0642494574584513 1.1337899393360247 1.0783695356757594 0.9286337019947464 0.9047901888631997 0.8168911258681465 1.063309124756008 0.847385447390225 0.953535333580496 1.0 11.830992776097625 -6.724877152729327 4.42795013252458 0.9261853480164058 1.1049461498125754 0.6156014661662603 0.0653028317782626 0.11585353427045278 5.032208676405078 0.010455505819080719 0.02181821615253294 1.884181985692888e-07 6.724877152729327 0.1787608017961696 VQDSAPVET(ph)PR ddPTM_A549_PD325901_60min_R1 2 VQDSAPVETPR 11 0 P09601 P09601 HMOX1 Heme oxygenase 1 1 VQDSAPVET(1)PR;VQDSAPVET(1)PR 101.32 0.00026604 53755000.0 2357.0 2636.1 2329.8 2844.2 2396.1 2351.8 2575.5 2700.7 2794.3999999999996 2247.5 2667.6 True False 2596.2809048683084 2858.2533983937547 2487.9142382255163 3019.8797743531336 2227.80620209625 2332.647720536806 2673.512061867678 2646.8324198418363 2676.961085787763 2105.59246643925 2339.5021113096604 1.1097578806692774 1.2217357635953128 1.0634374836416687 1.2908215640218403 0.9522565469492641 0.9970701497811355 1.1427696726339083 1.1313656897535909 1.1442439281617882 0.9000173396982031 1.0 11.191985815337059 -10.817292364107429 0.9680122399619842 0.9971171305413294 1.1180223956518685 0.2860028336789959 0.09460902563142934 0.7874756443816994 1.258732763372563 0.0681720502114904 0.015369739492141288 1.5230271170574937e-11 10.817292364107429 0.120905265110539 VQDT(ph)SNTGLGEDIIHQLSK ddPTM_A549_MK2206_60min_R1 1 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.491)S(0.43)NT(0.079)GLGEDIIHQLSK 110.55 5.3548e-10 62466000.0 2862.3 3214.7 3410.8 3673.1 4421.0 3121.9 3181.5 3570.8 5446.7 5376.5 5596.1 True False 3345.38626348372 3378.314498906124 3894.5027278152215 4573.009664891725 3770.676756463286 3452.257385850497 3759.537367996959 4076.9718351163674 4213.031146592617 4161.94491585858 4206.433925497126 0.7953022257655823 0.8031302901083527 0.9258442654260782 1.0871464394513877 0.8964069858811958 0.8207088110726715 0.8937588072425618 0.9692228398986539 1.0015683643704711 0.9894235805372152 1.0 12.038381967321472 -2.0575057202766076 0.21417064661799046 1.0097693073878558 5.938009217103131e-14 0.3390573888850752 0.07280829106073959 37.44795457481564 0.4392973943865261 0.05278278409992006 13.073213182570665 0.008759801796510812 2.0575057202766076 -1.0097693073877965 VQDT(ph)SNTGLGEDIIHQLSK ddPTM_A549_PD325901_60min_R1 2 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.399)S(0.3)NT(0.3)GLGEDIIHQLSK;VQDT(0.555)S(0.392)NT(0.052)GLGEDIIHQLSK 109.68 6.855900000000001e-10 115559500.0 6460.1 6385.6 6109.2 6467.1 8177.5 7238.700000000001 7266.6 8310.6 7780.200000000001 8247.7 8222.7 True False 7115.924596325736 6923.7369222651505 6523.807049603967 6866.558079150256 7603.140610843491 7179.750427183335 7543.134439436095 8144.83856346042 7453.225250374306 7726.938814438715 7211.360027989935 0.9867659593622037 0.9601152758136589 0.9046569612781331 0.9521862800496196 1.0543282517212997 0.9956166935662745 1.0460071900665646 1.1294455597622797 1.033539474030641 1.0714953607152644 1.0 12.81605565516883 -6.746464143926486 23.2667089820868 1.0279033240268898 0.9482817507397568 0.5293987459544519 0.041153086590641354 76.16736244698701 118337.57146712106 0.006037860188960428 0.012519656062334001 1.792816564167663e-07 6.746464143926486 -0.07962157328713293 VQDTS(ph)NTGLGEDIIHQLSK ddPTM_A549_MK2206_60min_R1 1 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.087)S(0.884)NT(0.029)GLGEDIIHQLSK 265.49 2.5547999999999993e-111 65814000.0 2248.1 3213.5 2619.5 2342.0 3475.8 2779.9 3064.4 3163.2 5168.6 4214.1 5141.0 True False 2627.5243192320017 3377.053424031737 2990.9844891262996 2915.7901051363765 2964.51442436442 3074.067172851723 3621.161813763911 3611.5932868937193 3997.9203525581715 3262.1318831804397 3864.3478156181495 0.6799399134344477 0.8738999658320187 0.7739946381218419 0.754536145362464 0.7671448238647249 0.7954944325734791 0.9370693287826273 0.9345932248378633 1.0345653505619177 0.8441610431639218 1.0 11.916009236311073 -7.970414561897863 1.4456112222544897 1.0147266587503625 0.7721300347875117 0.5727610428230716 0.06977962742333145 0.10019567689368626 0.4203393166189917 0.00772609225147265 0.011246130663969638 1.0704969594589692e-08 7.970414561897863 -0.24259662396285075 VQDTS(ph)NTGLGEDIIHQLSK ddPTM_A549_PD325901_60min_R1 2 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.04)S(0.957)NT(0.003)GLGEDIIHQLSK;VQDT(0.141)S(0.855)NT(0.004)GLGEDIIHQLSK 266.5 2.2842999999999997e-111 133420000.0 4089.2 3874.0 4406.4 4387.0 5171.7 4878.1 4589.4 4751.5 5684.3 5409.7 6051.5 True False 4504.332573690066 4200.47557580418 4705.444801835743 4657.97502640011 4808.45763339643 4838.374370928899 4764.052128416041 4656.72760502036 5445.4086386857225 5068.130618774824 5307.203863619134 0.8487204730474464 0.7914667843454116 0.8866146699378845 0.8776702659437138 0.906024670798571 0.9116616763294022 0.8976576462558004 0.8774352228943406 1.0260409772486756 0.9549530692643717 1.0 12.37373625217616 -8.7574188298837 24.97187022853819 1.0122971322805832 0.8754283175202892 0.6766196813913341 0.036015942811696754 33.5154625983197 208166.1732925499 0.0059344019109256385 0.006608000675647294 1.7481599649067853e-09 8.7574188298837 -0.136868814760294 VQEAARPEEVVSQT(ph)PLLR ddPTM_A549_MK2206_60min_R1 1 VQEAARPEEVVSQTPLLR 18 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 VQEAARPEEVVS(0.027)QT(0.973)PLLR 116.45 1.9668e-10 6494100.0 1355.6 1521.5 1765.9 1524.3 2507.2 2031.2 1670.8 1744.9 2860.4 2387.8 2541.7 True False 1584.3921387620217 1598.9378511480588 2016.3311736392945 1897.7535684284262 2138.3942012677576 2246.1402357985635 1974.3627328144948 1992.2449185321348 2212.5239671201866 1848.3943216008772 1910.525742648638 0.8292964095660473 0.8369098701237009 1.0553802697491919 0.9933148379343452 1.1192700278946341 1.1756660408483424 1.0334133106614711 1.0427731351948213 1.1580707434242035 0.9674794117342667 1.0 10.899753981531195 -5.7742170307270815 4.231102426472212 1.0754113365475357 0.8266519518611202 0.6445228585018861 0.06452957020172578 0.08741926722176646 3.569597099507964 0.009512604220945273 0.03591110744702798 1.6818333855465531e-06 5.7742170307270815 -0.24875938468641556 VQEHEDS(ph)GDS(ph)EVENEAK ddPTM_A549_MK2206_60min_R1 5 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 2 VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK 193.76 6.064699999999999e-41 377888000.0 19171.8 20773.300000000003 19987.399999999998 17729.3 26548.4 21310.21 15383.43 19754.4 30991.0 30150.899999999998 30914.600000000002 True False 22407.531134492263 21830.57224006177 22821.91386828134 22072.979295898513 22643.16552845283 23565.242277627458 18178.400104656746 22554.646695312746 23971.58798245759 23339.790749290518 23237.651620445213 0.9642769200816065 0.9394482969550396 0.9821093043757445 0.9498799472696292 0.9744171183171826 1.0140974080571041 0.7822821514658918 0.9706078335156924 1.031583929994313 1.0043954152731784 1.0 14.504176657985257 -8.538268532033399 14.075430541069439 1.0141915831210135 0.9440161597129746 0.22101253534466592 0.05601151795466209 1.5606543958960208 1425.155932685889 0.009247628321563778 0.010509693848565118 2.895552662160584e-09 8.538268532033399 -0.07017542340803895 VQEHEDS(ph)GDS(ph)EVENEAK ddPTM_A549_PD325901_60min_R1 4 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 2 VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK 150.36 3.6562e-17 820540000.0 17665.4 16872.9 18263.5 18533.600000000002 20394.6 18943.600000000002 16883.7 18778.9 19178.7 20635.5 22087.800000000003 True False 19458.77840341985 18294.8384984477 19502.970937347283 19678.378379140457 18962.153653550442 18789.329602330556 17526.218442615147 18404.34010773795 18372.6859347258 19332.57100832355 19371.140626100438 1.0045241412992134 0.9444378548260323 1.0068055007080594 1.0158605917416164 0.9788867893510137 0.9699650611701225 0.9047592385448142 0.9500906767947452 0.9484565875264293 0.998008913438741 1.0 14.241621285848368 -7.064029900260197 4.456179615240517 0.9668248360510893 0.991139984017716 0.18017762770438928 0.029830384686661292 0.4123052626743248 16.22430130399229 0.004940308673808409 0.008875061321951608 8.629191355571286e-08 7.064029900260197 0.024315147966626705 VQEHEDS(ph)GDSEVENEAK ddPTM_A549_MK2206_60min_R1 2 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 VQEHEDS(0.851)GDS(0.149)EVENEAK;VQEHEDS(0.701)GDS(0.299)EVENEAK 198.07 4.027e-48 11895600.0 2884.6 2897.9300000000003 1715.42 2049.02 3443.9 2401.96 2486.91 1760.8500000000001 3048.5 3211.5 3353.0 True False 3371.449958301068 3045.422258940187 1958.6923505772231 2551.029991984002 2937.306872106745 2656.1338129079927 2938.749355915548 2010.4558798769624 2358.019617454163 2486.0199195163827 2520.3575619077305 1.3376871636217844 1.2083294469674455 0.7771485999369998 1.0121698724577217 1.1654326023024342 1.053871820829061 1.16600493530415 0.7976867688389385 0.9355893199809755 0.9863758845529217 1.0 11.299412707354529 -8.236378776182127 24.937273573172096 0.9558416835968633 1.0914955985727481 0.24804886924247482 0.14145554075408162 1029.6674272997195 1024601.6286497341 0.02301956864786908 0.029711587460556278 5.802581162980966e-09 8.236378776182127 0.13565391497588486 VQEHEDS(ph)GDSEVENEAK ddPTM_A549_PD325901_60min_R1 1 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 VQEHEDS(0.798)GDS(0.202)EVENEAK 212.55 4.9382e-55 9095500.0 2282.3 2312.7 2086.7 1637.9 2376.8 2884.3 2244.0 2411.4 0.0 2331.4 2473.2 True False 2513.9974158595414 2507.5993454213544 2228.3160103464616 1739.0693630592077 2209.861767514865 2860.811217086617 2329.3966479639175 2363.302735293297 0.0 2184.195006120786 2169.0120789065268 1.159051828391354 1.1561020659163508 1.0273414482181362 0.8017794736928953 1.0188333154091662 1.3189466508314005 1.0739436034575918 1.0895756451871483 0.0 1.006999927460945 1.0 11.082822371849325 -8.701513052459529 24.95808119049746 0.5277770791579578 1.0777901735002617 0.2594758627875289 0.28355653328032865 62.04575960073403 25840.501037916172 0.061865448133122336 0.07014881090396079 1.9883230516449352e-09 8.701513052459529 0.5500130943423039 VQEHEDSGDS(ph)EVENEAK ddPTM_A549_MK2206_60min_R1 2 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 VQEHEDS(0.001)GDS(0.999)EVENEAK;VQEHEDS(0.369)GDS(0.631)EVENEAK 157.85 1.0834e-22 135461000.0 1845.4 1802.67 1984.84 1296.1 2559.7 1778.69 1726.46 1897.27 2769.0 2558.6 2690.1000000000004 True False 2156.858404301737 1894.4182031738899 2266.3201578154017 1613.644558184139 2183.1715208140868 1966.9097952011355 2040.1354343397861 2166.213832645689 2141.8259211843783 1980.6104829751253 2022.0739270169968 1.0666565527025895 0.9368689135755649 1.120789961007371 0.7980146208425818 1.0796694876703863 0.9727190331279131 1.0089321696311242 1.0712832027072967 1.0592223620350232 0.9794945953815649 1.0 10.98162002779379 -8.007705152483032 23.133024138640096 1.0323825599710799 0.9933812397674137 0.028837581225828024 0.08362035584286615 347.0086655152956 1041826.5375234747 0.011843648188157335 0.01597118726866298 9.824146892911733e-09 8.007705152483032 -0.0390013202036662 VQEHEDSGDS(ph)EVENEAK ddPTM_A549_PD325901_60min_R1 3 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 VQEHEDS(0.375)GDS(0.625)EVENEAK;VQEHEDS(0.084)GDS(0.916)EVENEAK;VQEHEDS(0.049)GDS(0.951)EVENEAK 260.31 6.3946e-87 202165900.0 9024.9 9449.8 8917.099999999999 8134.6 11211.900000000001 9612.3 8684.400000000001 10597.2 9399.0 9496.0 9963.400000000001 True False 9941.101204219764 10246.167810075982 9522.268028878341 8637.055766982985 10424.414822955205 9534.020615747912 9014.88959428603 10385.83053265743 9003.992715902943 8896.420939402497 8737.964963196384 1.1376906689476205 1.1726034440778865 1.0897580923001384 0.9884516364349799 1.1930025889165286 1.091103095046095 1.0316921196475417 1.1885868822319299 1.0304450468532487 1.0181341967922184 1.0 13.093081605650882 -8.942976327672575 11.42045680451241 1.0134086570479184 1.1083065920673365 0.33553432701761243 0.060070629724852456 0.4985799054063033 98.31042275778634 0.010121290818171327 0.01075237806970784 1.1403119414753888e-09 8.942976327672575 0.09489793501941812 VQEKPDS(ph)PGGSTQIQR ddPTM_A549_MK2206_60min_R1 2 VQEKPDSPGGSTQIQR 16 1 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 VQEKPDS(1)PGGSTQIQR;VQEKPDS(0.987)PGGS(0.013)TQIQR 166.91 4.3191e-22 347590000.0 12880.0 15115.5 14255.5 12783.1 19304.0 14798.5 14386.9 13557.7 20760.8 20694.0 21639.0 True False 15053.829114233427 15884.814386479462 16277.144258346987 15914.96007385517 16464.407171854164 16364.467447550713 17000.81350295 15479.545493714904 16058.511948185145 16019.211027392816 16265.439093981926 0.9255101585178365 0.9765991741567376 1.000719634084111 0.9784525325076265 1.0122325672687098 1.0060882680754328 1.04521085503558 0.9516832225846399 0.9872781088416271 0.9848618862874589 1.0 13.989522148756627 -5.2750837063910465 2.2673249565918843 0.995845718200243 0.908859904107692 0.4655521256616144 0.021985579432780428 0.3788665513872577 2.2872159404148626 0.0028903440720134 0.0646727786687062 5.307821308458058e-06 5.2750837063910465 -0.08698581409255102 VQEKPDS(ph)PGGSTQIQR ddPTM_A549_PD325901_60min_R1 4 VQEKPDSPGGSTQIQR 16 1 Q13459-2;Q13459;M0R300;M0R0P8 Q13459-2 MYO9B Unconventional myosin-IXb 1 VQEKPDS(1)PGGSTQIQR;VQEKPDS(1)PGGSTQIQR;VQEKPDS(1)PGGSTQIQR;VQEKPDS(0.998)PGGS(0.002)TQIQR 197.15 9.024799999999999e-40 623515000.0 56676.6 56309.4 61098.0 57899.299999999996 66907.59999999999 64152.3 61712.299999999996 61011.799999999996 60987.399999999994 61108.0 63289.4 True False 62430.36670889231 61054.79075585651 65244.47769212059 61475.608262149064 62208.24099468941 63629.86493842725 64060.7953467663 59794.87178616885 58424.31166739644 57249.6304512435 55505.20502456198 1.1247659869243944 1.0999831588558 1.1754659344695477 1.1075647452332638 1.1207640971177608 1.1463765409076494 1.1541403246491626 1.0772840449775587 1.0525915838261062 1.0314281413051187 1.0 15.760335446706248 -8.856610774541728 1.0444296801813822 1.0153537276621392 1.1327901379570426 0.7879824036022075 0.023778816929991835 0.13506999923832 0.29684431245426435 0.005527752864139606 0.005569167108811989 1.3911988995309658e-09 8.856610774541728 0.11743641029490348 VQFDGTNS(ph)AFK ddPTM_A549_MK2206_60min_R1 2 VQFDGTNSAFK 11 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 VQFDGTNS(1)AFK;VQFDGT(0.006)NS(0.994)AFK 134.21 5.8775e-08 12661100.0 6956.8 7727.7 7163.6 5994.0 10372.099999999999 8183.3 7178.5 7778.6 12230.1 10496.7 10267.8 True False 8130.937762569806 8121.006922324586 8179.5061982459065 7462.530269080889 8846.377829837787 9049.251374365092 8482.740529990935 8881.24037096342 9460.001877456505 8125.488179725244 7718.021883136359 1.0535002213890654 1.0522135134222328 1.0597930819706376 0.9668967492028351 1.146197557325777 1.1724832491259747 1.0990822076477216 1.1507145879397749 1.225702909462633 1.052794135953305 1.0 12.914015419063093 -6.7810831449999736 24.997991494831634 1.1190454878114968 1.0363726367269759 0.32418235662855976 0.06094027772998588 323.16257912546365 411245.2037614211 0.01237162786919285 0.02340335904908932 1.6554529992392902e-07 6.7810831449999736 -0.08267285108452094 VQFDGTNS(ph)AFK ddPTM_A549_PD325901_60min_R1 1 VQFDGTNSAFK 11 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 VQFDGT(0.02)NS(0.98)AFK 130.07 9.7049e-08 8810100.0 5975.6 5547.7 5835.8 6335.1 6951.1 6065.6 5770.3 6562.2 6350.2 5991.3 6854.4 True False 6582.238512995785 6015.224148654846 6231.852481516213 6726.404738944001 6462.878715993181 6016.203764643272 5989.891924129317 6431.311773053688 6083.323177415346 5613.008295518346 6011.3522536215805 1.0949680263754749 1.0006440971797874 1.0366806366673638 1.1189503551204527 1.075112294758567 1.0008070581820867 0.9964300329465247 1.0698610731352667 1.011972501486734 0.933734717032553 1.0 12.553473846339168 -7.263274535172928 24.847283013974018 1.0100643875575643 1.0630745185361201 0.3594666289284475 0.04118340024715262 130.75418945962346 1770359.4219013008 0.005143149442576724 0.008468468918234605 5.454129744112347e-08 7.263274535172928 0.05301013097855578 VQGGHS(ph)PDDHR ddPTM_A549_MK2206_60min_R1 3 VQGGHSPDDHR 11 0 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 VQGGHS(1)PDDHR;VQGGHS(1)PDDHR;VQGGHS(1)PDDHR 104.94 5.674e-05 144427000.0 2828.23 2832.6000000000004 2261.5 2198.34 3157.68 2828.6600000000003 2703.58 3082.23 3045.2599999999998 3561.69 3572.46 True False 3305.566080415249 2976.76724098718 2582.2147059206413 2736.9333986872316 2693.189454953403 3127.9869236874574 3194.785490293639 3519.145541433496 2355.513472280946 2757.1017552988656 2685.319587119862 1.2309767881150535 1.1085336938162769 0.9616042419331527 1.0192207332843866 1.0029307006403592 1.1648471707765622 1.1897226332453803 1.310512744297953 0.8771818012199252 1.026731331541805 1.0 11.390878082115035 -8.796751054493162 24.99997731179775 0.9420025015719348 1.1137304340803111 0.29420339373106486 0.10443805083998256 148.41317562344264 105073.02466070036 0.019374430910689355 0.020626042258564993 1.5967941964660815e-09 8.796751054493162 0.17172793250837637 VQGGHS(ph)PDDHR ddPTM_A549_PD325901_60min_R1 3 VQGGHSPDDHR 11 0 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 VQGGHS(1)PDDHR;VQGGHS(1)PDDHR;VQGGHS(1)PDDHR 110.84 2.3398000000000002e-05 202248000.0 2624.7400000000002 2558.94 2311.06 2368.87 2893.68 2101.38 2294.19 2629.09 2871.85 2594.66 2723.32 True False 2891.2016725685385 2774.59085440071 2467.9024291327405 2515.1897198058878 2690.437899454062 2084.2670579903192 2381.4966558789392 2576.650737468796 2751.156131627394 2430.832724792553 2388.3689045478422 1.210533961928252 1.1617095035517497 1.0333003517310302 1.053099341151427 1.1264750157863097 0.872673837790107 0.9971226184297505 1.0788328103595866 1.1518974838387597 1.017779422669527 1.0 11.22180997539246 -5.635799795550562 4.1279539199631285 1.0558304864174803 1.2004388066551073 0.3736126113855711 0.07208063775832639 0.20399837776313642 6.075523263852959 0.011331944490269348 0.05010314802423215 2.313130869498238e-06 5.635799795550562 0.14460832023762693 VQGGHS(ph)PDDHRVR ddPTM_A549_MK2206_60min_R1 2 VQGGHSPDDHRVR 13 1 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 VQGGHS(1)PDDHRVR;VQGGHS(1)PDDHRVR 70.529 0.0011515 25664200.0 504.78999999999996 589.61 564.72 634.19 394.51 262.01 561.86 348.24 372.6 1011.54 1160.93 True False 589.9862110694013 619.6186305720721 644.8057876309996 789.566578469871 336.47810160423705 289.735724291838 663.9426891663593 397.6040864402719 288.2066949199347 783.0324114549591 872.6390409619869 0.676094219230677 0.7100514662844009 0.7389146684523459 0.9048031791007909 0.3855868071560351 0.3320224178515286 0.760844585218691 0.45563407981604614 0.33027022788508187 0.8973153557188474 1.0 9.769241209606818 -11.030827336148086 1.3459177892474607 0.9982610173821792 0.5634216983623666 0.3509232542581321 0.18562494225569603 0.3649915888302832 1.1858676477349803 0.14209513562219303 0.032506393097068806 9.314781326134328e-12 11.030827336148086 -0.43483931901981265 VQGGHS(ph)PDDHRVR ddPTM_A549_PD325901_60min_R1 1 VQGGHSPDDHRVR 13 1 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 VQGGHS(1)PDDHRVR 114.63 8.3004e-06 23397000.0 1264.4 1580.7 1481.3 1787.1 1540.9 2030.5 1835.7 1743.2 1554.4 1529.2 2170.0 True False 1392.7609571979162 1713.9111364671317 1581.8299257805215 1897.4851082014231 1432.6724998164161 2013.9642812101288 1905.5585680335835 1708.4305084860541 1489.0739735716081 1432.6460510250947 1903.1037567633691 0.7318365865488076 0.9005873328640791 0.8311842799736564 0.9970476393932921 0.7528084029706184 1.058252485736932 1.0012898988095054 0.8977074961964249 0.7824449761499571 0.7527945052568299 1.0 10.894138503808117 -4.4924338439921545 1.2420097189067847 0.9080147212358929 7.303665740495657e-13 0.1680701990039718 0.10343879647832994 11.112702457854269 3.5195357450543256 0.015087035641847378 20.5982056398933 3.217852670337655e-05 4.4924338439921545 -0.9080147212351625 VQGGVPAGS(ph)DEYEDECPHLIALSSLNR ddPTM_A549_PD325901_60min_R1 1 VQGGVPAGSDEYEDECPHLIALSSLNR 27 0 Q9BVS4-2;Q9BVS4;H0Y919;H0Y8R4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 VQGGVPAGS(1)DEYEDECPHLIALSSLNR 106.21 5.4344e-13 6391500.0 1761.6 1872.5 1896.3 1578.5 1605.7 1841.3 2193.3 2262.5 1907.9 1734.4 2506.1 True False 1940.4363351786205 2030.302146539322 2024.9943213782494 1676.0003599663962 1492.9211713642806 1826.3050632810705 2276.767231719811 2217.372662603087 1827.717597900972 1624.889688005444 2197.865587476809 0.8828730684146512 0.9237608332865099 0.9213458424921156 0.7625581698517223 0.6792595415619488 0.8309448374309836 1.0358992127146331 1.0088754631936672 0.8315875221465321 0.7393034848281362 1.0 11.101887444284042 -7.67995308563484 24.969917960072785 0.9343587678367898 0.8313239518907187 0.1550488079359078 0.10266395486497108 36.6991420240711 11242.910680668752 0.015470464477140053 0.022946404472219736 2.0895218378340947e-08 7.67995308563484 -0.10303481594607111 VQGLLENGDSVT(ph)SPEK ddPTM_A549_MK2206_60min_R1 1 VQGLLENGDSVTSPEK 16 0 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 VQGLLENGDSVT(0.5)S(0.5)PEK 147.56 1.7775e-14 7291600.0 1865.7 2223.9 2269.8 1707.2 3393.0 2888.9 2359.2 2807.1 3544.0 3394.8 3472.3 True False 2180.5845480143876 2337.08701095509 2591.6917707268076 2125.4640766391212 2893.8941946799196 3194.601480503381 2787.836102020565 3205.0150213832067 2741.2896586050692 2627.9123222090034 2610.0320793952337 0.8354627382662849 0.8954246307564974 0.9929731481795903 0.8143440432853258 1.1087580944026019 1.2239701978082955 1.0681233092991447 1.2279600111757383 1.0502896421258734 1.0068505835445183 1.0 11.349851823449585 -6.76838417967977 24.999938841570163 1.0636865798789605 0.8930722424807334 0.568045630331141 0.08617965736393378 117.53618437284783 423109.0037273028 0.013680397310939129 0.02625661323221764 1.7045738449288711e-07 6.76838417967977 -0.17061433739822718 VQGLLENGDSVT(ph)SPEK ddPTM_A549_PD325901_60min_R1 1 VQGLLENGDSVTSPEK 16 0 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 VQGLLENGDSVT(0.687)S(0.312)PEK 168.05 7.5639e-28 12828000.0 3300.6 4035.1 3662.7 3614.2 4372.5 4409.6 4382.1 4332.7 4009.9 3917.2 5359.3 True False 3635.674482226701 4375.152038184683 3911.272847604344 3837.440925556252 4065.390684306105 4373.689679598222 4548.863213477132 4246.280899562606 3841.377847802873 3669.8673234864636 4700.140075401809 0.773524708604752 0.9308556698303629 0.8321609111341165 0.8164524597127447 0.8649509629686005 0.9305445389783029 0.9678143928696117 0.9034370957975325 0.8172900777801774 0.7807995643986699 1.0 12.19848803785155 -7.115471004170213 4.4932882416727296 0.916295385780429 0.8440442016820664 0.12610385603546026 0.06852964881024855 0.3197709984172558 10.439793009835592 0.010894728786256544 0.01931785239112032 7.665297160907875e-08 7.115471004170213 -0.07225118409836262 VQGLLENGDSVTS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 VQGLLENGDSVTSPEK 16 0 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 VQGLLENGDSVT(0.098)S(0.902)PEK 169.02 6.5976e-28 12260000.0 2110.6 2205.6 1940.8 1855.0 2463.3 2526.6 2303.3 2318.4 3334.9 3321.0 3410.4 True False 2466.8176807842447 2317.8556191207085 2216.0346235908837 2309.475083274115 2100.9518331137797 2793.9631349786573 2721.779795601883 2647.040299802224 2579.550474740983 2570.7837934653294 2563.503557748324 0.9622836969849949 0.9041749180003548 0.8644554507805549 0.9009057453006474 0.8195626749818788 1.0899002369369675 1.0617421565010747 1.0325869421173246 1.00625975998518 1.002839955378646 1.0 11.32390118463732 -7.260490127797963 24.99995770653191 1.0158269328079803 0.8902046434959571 0.7318279579933062 0.042152359550445245 40.02629764255081 1054146.4890801292 0.006468194311474822 0.010799150658282708 5.489210333104866e-08 7.260490127797963 -0.12562228931202324 VQGLLENGDSVTS(ph)PEK ddPTM_A549_PD325901_60min_R1 1 VQGLLENGDSVTSPEK 16 0 P41229-5;P41229;P41229-4;P41229-3;P41229-2 P41229-5 KDM5C Lysine-specific demethylase 5C 1 VQGLLENGDSVT(0.075)S(0.925)PEK 220.59 2.2078e-47 11551000.0 4735.1 4884.4 4214.0 4863.6 6524.1 5222.8 4650.2 5120.6 5161.5 5381.4 5742.1 True False 5215.803866203618 5296.02552980329 4499.987380840553 5164.013525962976 6065.869722923151 5180.267248413824 4827.165905687077 5018.465615967009 4944.580104599751 5041.617485604528 5035.858102170937 1.0357328900818525 1.0516629782559195 0.8935889950712923 1.0254485772219817 1.2045354733701057 1.0286761746087787 0.9585587615358158 0.9965462715884648 0.9818743904773973 1.0011436746859703 1.0 12.298021916770157 -7.552140580727264 16.160871345144976 0.9896257406584127 1.0418399069159328 0.1315115648630487 0.06753050969523262 7.6896058778887175 4245.795134149672 0.010530727652982852 0.0156228325820661 2.804525668606932e-08 7.552140580727264 0.05221416625752007 VQGLLENGDSVTS(ph)PEKVAPEEGSGKR ddPTM_A549_MK2206_60min_R1 2 VQGLLENGDSVTSPEKVAPEEGSGKR 26 2 P41229-5;P41229 P41229-5 KDM5C Lysine-specific demethylase 5C 1 VQGLLENGDSVT(0.137)S(0.863)PEKVAPEEGSGKR;VQGLLENGDSVT(0.034)S(0.966)PEKVAPEEGSGKR 156.37 3.6433e-41 24671000.0 3720.5 4426.5 4057.3 4110.4 5129.799999999999 3308.5 3310.5 3619.6 6712.5 7284.6 6083.4 True False 4348.42944250819 4651.789942889834 4632.686149162867 5117.44818452287 4375.213215404967 3658.6032739954444 3911.9749981939117 4132.689384560101 5192.129467659858 5639.0038006255745 4572.72388670131 0.9509494888056924 1.0172908004392018 1.0131130293337725 1.1191246861429271 0.9568067794622902 0.8000927597302846 0.8555021241433294 0.9037697195273596 1.1354565891808912 1.233182658814211 1.0 12.158838092651674 -8.754564919995163 24.999724128314377 1.0639656125680867 0.9537292783590412 0.3290112534494176 0.09932730316940419 190.86310443280667 694093.1348593514 0.017065496215231575 0.019145120272922103 1.7596855996267536e-09 8.754564919995163 -0.11023633420904555 VQGPGILPGLDSESAS(ph)SSIR ddPTM_A549_PD325901_60min_R1 1 VQGPGILPGLDSESASSSIR 20 0 Q9H813;Q9H813-2 Q9H813 TMEM206 Transmembrane protein 206 1 VQGPGILPGLDSES(0.019)AS(0.785)S(0.074)S(0.121)IR 149.34 3.1678000000000004e-21 3761200.0 1427.5 1451.1 1341.3 1528.6 1412.8 1697.3 1103.2 1367.0 1302.4 1309.2 1438.9 True False 1572.4187491300424 1573.3892896358932 1432.3286838921301 1623.018150297517 1313.5698018954067 1683.4777515380204 1145.1828796942032 1339.7341126092465 1247.6646572180005 1226.5368885705302 1261.924421938622 1.246048274994493 1.2468173705829275 1.1350352358596294 1.286145288958088 1.0409258899019047 1.3340559246422938 0.9074892757324758 1.0616595489538827 0.9886999851395895 0.9719574859215991 1.0 10.301409792954473 -7.767841386916696 24.999976007294364 0.9946751294453813 1.208000354712645 0.6674363701590933 0.08025944299222003 64.8811153024464 253362.0101047221 0.010918547939550816 0.015281320161994103 1.706705598417343e-08 7.767841386916696 0.21332522526726372 VQGS(ph)PLKK ddPTM_A549_MK2206_60min_R1 6 VQGSPLKK 8 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK 98.04799999999999 0.0019648 760334500.0 28669.9 30763.6 30955.1 26244.0 39152.9 32903.3 28076.7 31087.800000000003 43756.2 44284.3 46267.3 True False 33508.67820824232 32329.335838040366 35344.99864835023 32673.78117813791 33393.56027553302 36385.10536655713 33177.87295930857 35494.590852394605 33845.49056429321 34280.445873217934 34777.85249748096 0.9635062490034263 0.9295955188832333 1.0163076817612688 0.9394996767124866 0.9601961558135824 1.0462148394353155 0.9539942974256884 1.020609045799063 0.9731909285297221 0.9856976038328112 1.0 15.085881229764741 VQGS(ph)PLKK ddPTM_A549_PD325901_60min_R1 8 VQGSPLKK 8 1 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK 97.81299999999999 0.0019695 1478688200.0 59238.299999999996 56879.5 60016.0 58260.4 67245.0 57546.3 62596.00000000001 60019.8 60701.4 56666.1 61909.6 True False 65252.1286070684 61672.93508362261 64089.04666552604 61859.01258903149 62521.94318265609 57077.66201221496 64978.125033845536 58822.65800437777 58150.33125280465 53088.19277530286 54295.11167728915 1.201804851142104 1.1358837504596109 1.1803833657521245 1.1393109007068534 1.1515206664324462 1.0512486345265168 1.196758290507853 1.08338773394553 1.0710049110577313 0.977771131420453 1.0 15.728534694035913 -8.978785943349925 0.20639780372925523 0.9502979053652714 1.2103291636116258 0.7326606258949395 0.0379910817121092 0.9590778227346926 0.16149607203598432 0.09325428688914829 0.07181872710889015 1.0500598584628534e-09 8.978785943349925 0.2600312582463544 VQGSDS(ph)DEEVVVATTR ddPTM_A549_MK2206_60min_R1 2 VQGSDSDEEVVVATTR 16 0 A0A140T936;P26640-2;P26640 A0A140T936 VARS Valine--tRNA ligase 1 VQGS(0.084)DS(0.916)DEEVVVATTR;VQGS(0.187)DS(0.813)DEEVVVATTR 101.08 1.2493e-06 3617800.0 1020.86 1272.28 1068.03 1164.26 1796.35 1299.19 1330.54 1454.63 2016.55 1695.58 1804.15 True False 1193.1562103692809 1337.0336176527464 1219.4927138467488 1449.5037522656166 1532.1092946104552 1436.6694234674753 1572.2818952112757 1660.828257117543 1559.8046447686372 1312.547300368547 1356.1297629930918 0.879824514533097 0.9859186444679169 0.8992448562999062 1.06885328515056 1.1297659976350358 1.0593893465597464 1.1593889745042671 1.2246824031440444 1.1501883428367636 0.9678626162378777 1.0 10.405279515842613 -6.334293001309197 5.032906687757326 1.0936193071463016 0.9282015875021276 0.5290240097371672 0.07295438216090819 0.14533711296259033 6.876185694810219 0.011185167122219989 0.026804265608981876 4.631343558794492e-07 6.334293001309197 -0.16541771964417407 VQIPVSRPDPEPVS(ph)DNEEDS(ph)YDEEIHD ddPTM_A549_PD325901_60min_R1 1 VQIPVSRPDPEPVSDNEEDSYDEEIHD 27 1 H0YLT6 H0YLT6 TJP1 2 VQIPVS(0.003)RPDPEPVS(0.995)DNEEDS(0.845)Y(0.157)DEEIHD 71.903 2.5146e-05 9634500.0 2224.9 2355.2 2596.9 2376.6 2998.4 2890.8 2571.6 2961.7 2827.6 3032.6 3115.0 True False 2450.7702101151895 2553.6809695751185 2773.1412504282944 2523.3971843497843 2787.802727918451 2867.258283241685 2669.463645233514 2902.6265700912973 2708.765805243874 2841.1211184532444 2731.8747476119315 0.8971019671591937 0.9347723470145983 1.0151055617950406 0.9236869979326878 1.020472380864243 1.049557006867939 0.9771544788307098 1.062503532648643 0.9915409949199692 1.039989524020752 1.0 11.415675624387639 -4.942938159699034 0.8091990310967766 1.0030495717455274 0.7736016437162138 0.4900947124184636 0.036767535637149996 2.327128352959259 0.7769175985362207 0.005149730868990419 0.5392579802337106 1.1404121622021244e-05 4.942938159699034 -0.22944792802931369 VQIPVSRPDPEPVS(ph)DNEEDS(ph)YDEEIHDPR ddPTM_A549_PD325901_60min_R1 1 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 VQIPVS(0.001)RPDPEPVS(0.999)DNEEDS(0.914)Y(0.086)DEEIHDPR 105.98 4.287e-14 458150000.0 3704.8 4901.6 4569.5 4326.9 5675.9 4999.7 4453.5 4737.1 5011.5 6058.2 4705.4 True False 4080.908568670391 5314.675034166695 4879.6137486357175 4594.162785897116 5277.244364792002 4958.984100845255 4622.9803795487105 4642.614824316939 4800.884082960696 5675.684218101119 4126.665629988183 0.9889118563458889 1.2878860345614949 1.18245920221302 1.113286899842736 1.278815595439244 1.2016927334283332 1.1202701633865955 1.1250281075790076 1.1633809262550898 1.3753680881863382 1.0 12.010760830954519 -10.79103843701233 0.4730241077412904 0.9557293428441147 1.1756240380615024 0.0 0.13692688296047076 1.376986451505965 0.38794534416626475 0.14354172049564465 0.018664460263747924 1.617936836629007e-11 10.79103843701233 0.2198946952173877 VQIPVSRPDPEPVS(ph)DNEEDSY(ph)DEEIHD ddPTM_A549_PD325901_60min_R1 1 VQIPVSRPDPEPVSDNEEDSYDEEIHD 27 1 H0YLT6 H0YLT6 TJP1 2 VQIPVSRPDPEPVS(0.937)DNEEDS(0.409)Y(0.654)DEEIHD 66.479 0.0034109 8806100.0 937.5 1201.5 1147.8 1439.1 1335.2 1629.6 1331.4 1671.0 1731.7 1467.8 1657.7 True False 1032.6743098489765 1302.7546216646172 1225.6966102821048 1527.9899385667647 1241.4201581899404 1616.3290778921573 1382.0671555700355 1637.670594125859 1658.9226711489662 1375.1228575036855 1453.813409026099 0.7103210793335294 0.8960947901404519 0.8430907313636568 1.0510220424988075 0.8539061137299321 1.1117857820385126 0.9506496136226135 1.1264654624577475 1.1410836224576224 0.9458730047240879 1.0 10.505626401824033 -5.254410341855959 0.4976072846269074 1.0684225234036804 0.50623182924523 0.5370365951948128 0.08814662215781996 2.064413900017973 0.33456592627447423 0.016353679764553215 0.6768557333536893 5.566595422575647e-06 5.254410341855959 -0.5621906941584504 VQIPVSRPDPEPVS(ph)DNEEDSY(ph)DEEIHDPR ddPTM_A549_PD325901_60min_R1 2 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 VQIPVSRPDPEPVS(0.899)DNEEDS(0.4)Y(0.701)DEEIHDPR;VQIPVSRPDPEPVS(0.999)DNEEDS(0.494)Y(0.507)DEEIHDPR 126.67 9.5009e-20 708390000.0 6217.3 6592.0 7087.1 6420.0 7520.9 7080.1 6983.5 7692.6 6303.2 7051.4 7798.6 True False 6848.475719065649 7147.530974626013 7568.0732241943715 6816.5488191221175 6992.657929696463 7022.442012999672 7249.260914017832 7539.165058272041 6038.298423968449 6606.173400600548 6839.421639398527 1.0013238077931863 1.0450490335984874 1.1065370177791705 0.9966557376511705 1.0224048608752554 1.0267596272390718 1.0599230894405491 1.1023103203409246 0.8828668186188138 0.965896496649022 1.0 12.73965861660804 -8.75998468914331 24.999946207889778 0.9446871097771354 1.044673993392133 0.5015682377702102 0.04233482779857994 26.476805878468742 455022.7877253659 0.008920685067446511 0.009851485676146613 1.737862095216187e-09 8.75998468914331 0.09998688361499752 VQIPVSRPDPEPVS(ph)DNEEDSYDEEIHDPR ddPTM_A549_MK2206_60min_R1 6 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVS(0.001)RPDPEPVS(0.999)DNEEDSYDEEIHDPR;VQIPVS(0.002)RPDPEPVS(0.997)DNEEDSYDEEIHDPR;VQIPVSRPDPEPVS(0.996)DNEEDS(0.003)YDEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;VQIPVSRPDPEPVS(0.952)DNEEDS(0.048)YDEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR 293.98 4.7157999999999985e-185 175406200.0 10529.06 10690.48 9670.76 9717.759999999998 13505.2 10913.25 10894.01 10791.09 16093.6 15954.600000000002 16960.699999999997 True False 12306.107917198027 11234.579769268028 11042.219186128286 12098.611636246826 11518.602970230262 12068.08287137094 12873.310602650492 12320.760053827116 12448.425296198233 12350.444779049061 12748.890098493426 0.9652689624057765 0.8812202225035771 0.866131804480233 0.9489933274800568 0.9034984913385872 0.9465987060941925 1.009759320473848 0.966418249639088 0.9764320815401256 0.968746666073194 1.0 13.638084032978782 -7.523120454454622 3.8192572506670763 0.9879202036684298 0.9111207385017867 0.5822322983313832 0.02860011793358926 0.10840175699651004 3.5165006155481926 0.004200872008969293 0.006571759337361836 2.9983307967209465e-08 7.523120454454622 -0.07679946516664315 VQIPVSRPDPEPVS(ph)DNEEDSYDEEIHDPR ddPTM_A549_PD325901_60min_R1 4 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVS(0.001)RPDPEPVS(0.985)DNEEDS(0.014)YDEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR 321.4 1.9330999999999993e-224 457277000.0 12770.0 11558.2 12082.099999999999 10891.7 15959.400000000001 11834.5 11140.1 12980.599999999999 13865.8 13296.2 14343.3 True False 14066.400999222871 12532.250077506425 12902.063961569447 11564.455572154571 14838.466800941073 11738.123755715977 11564.04260159662 12721.691749916296 13283.068645618368 12456.675662856318 12579.16502967005 1.1182301023990804 0.9962704239865708 1.0256693453927814 0.9193341167619538 1.1796066563990601 0.9331401351385137 0.9193012870346248 1.0113303800299998 1.0559578965923448 0.990262520085807 1.0 13.618748542821287 -3.8028822545394547 15.506672824367357 1.019112881732673 1.0209425479060288 0.0 0.07750218638038764 0.0 0.0 0.009285605286429315 0.0 0.00015744096588889167 3.8028822545394547 0.0018296661733558928 VQIPVSRPDPEPVSDNEEDS(ph)YDEEIHDPR ddPTM_A549_MK2206_60min_R1 2 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVSRPDPEPVSDNEEDS(1)YDEEIHDPR;VQIPVSRPDPEPVSDNEEDS(1)YDEEIHDPR 182.73 1.1246999999999998e-66 28166000.0 2962.3 3060.8 2562.8 2904.0 3389.1 3119.6000000000004 2450.4 3504.0 4749.5 4455.4 4284.0 True False 3462.263818718455 3216.5816462661714 2926.243576534787 3615.480130365514 2890.5678795136214 3449.7140013771145 2895.605961508644 4000.702730549948 3673.7458333929967 3448.922045590311 3220.164567614891 1.0751822604156165 0.9988873483719581 0.9087248539916066 1.1227625341655831 0.8976460111958207 1.071285000794927 0.8992105529728748 1.242390768094559 1.1408565482459376 1.0710390643621224 1.0 11.652918704311002 -8.227976756238851 24.99372713813886 1.081564821023715 0.996938537109049 0.2541039922999546 0.09086479043083809 924.9986840095463 690896.1572402975 0.015128869849170317 0.019530729221932375 5.915932958379344e-09 8.227976756238851 -0.08462628391466598 VQIPVSRPDPEPVSDNEEDS(ph)YDEEIHDPR ddPTM_A549_PD325901_60min_R1 2 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVSRPDPEPVSDNEEDS(1)YDEEIHDPR;VQIPVSRPDPEPVSDNEEDS(1)YDEEIHDPR 228.29 1.1453999999999997e-104 52802000.0 3287.1000000000004 4203.1 3891.0 3952.1000000000004 4379.3 4247.0 4721.200000000001 4709.4 4511.0 4777.1 4967.9 True False 3620.8039721648756 4557.309987780735 4155.066658483768 4196.212241129677 4071.7130757648315 4212.413840088363 4900.86784953977 4615.4673225471715 4321.418357425065 4475.473090735011 4356.879794112783 0.8310543653413328 1.0460031497629985 0.9536794345573375 0.9631232532051475 0.9345479490314876 0.9668418774785503 1.124857255910996 1.0593515407020877 0.9918608182085639 1.027219777048354 1.0 12.089079594649233 -7.542811271314844 24.999661577754928 1.0121124274743447 0.952470969086127 0.3225067110175337 0.06004121874122399 308.36278231481134 386751.69583834487 0.00902690984776637 0.013389930489880773 2.865422908615584e-08 7.542811271314844 -0.05964145838821766 VQIS(ph)PDSGGLPER ddPTM_A549_MK2206_60min_R1 2 VQISPDSGGLPER 13 0 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 VQIS(0.807)PDS(0.193)GGLPER;VQIS(0.993)PDS(0.007)GGLPER 194.01 1.1372e-26 93615000.0 4313.1 5497.7 5347.6 4556.9 7076.9 5007.6 4833.0 4998.3 7268.6 7002.9 6766.8 True False 5041.045834829205 5777.5094474247 6105.970091258559 5673.340704567012 6035.89738471274 5537.500908224145 5711.093540634699 5706.824331651766 5622.273705569077 5420.940026274724 5086.4168058208315 0.9910799738354701 1.1358702339951752 1.2004462717783888 1.1153904450131795 1.1866698336253794 1.08868406181088 1.1228127301913196 1.1219733949292061 1.1053505680334763 1.0657679528093467 1.0 12.312433973007911 -10.34401638217085 0.5533011957793402 0.98952884645509 1.1270606275445074 0.23769747633973792 0.05472460862838851 0.7295710179300562 0.37542477661914053 0.04907855014939395 0.011833279399939197 4.5288049632115195e-11 10.34401638217085 0.13753178108941744 VQIS(ph)PDSGGLPER ddPTM_A549_PD325901_60min_R1 2 VQISPDSGGLPER 13 0 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 VQIS(1)PDSGGLPER;VQIS(0.899)PDS(0.101)GGLPER 217.77 7.467899999999999e-38 137447000.0 9989.6 12107.3 9599.2 10187.099999999999 10576.2 9334.4 9695.9 10027.9 11695.7 10690.6 14210.0 True False 11003.736838045164 13127.624661573042 10250.659436678852 10816.334030417274 9833.364197909255 9258.383741210457 10064.882780300059 9827.88566776463 11204.17040189233 10015.593691530785 12462.26008461173 0.882964788355883 1.053390361976388 0.8225361505122383 0.8679271622466918 0.7890514345829929 0.7429136993090534 0.8076290104656115 0.7886118249048584 0.8990480318836488 0.8036739422488812 1.0 13.605278110606417 -9.68107726324561 1.0447598874495245 0.981806994425262 0.8472113981231397 0.0 0.09449714772521967 0.3992074157493872 0.9006446880389571 0.025150769952567115 0.01664942209055589 2.0841200743202628e-10 9.68107726324561 -0.13459559630212226 VQKS(ph)PPEPEIINQVQQNELK ddPTM_A549_MK2206_60min_R1 2 VQKSPPEPEIINQVQQNELK 20 1 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 VQKS(1)PPEPEIINQVQQNELK;VQKS(1)PPEPEIINQVQQNELK 148.95 3.2455999999999994e-43 2086700.0 743.21 1251.3 803.36 1049.5 1474.2 1348.4 840.5 1014.3 1246.2 1461.5 1369.5 True False 868.645678260049 1314.9858252655708 917.2885280337861 1306.6275471138454 1257.3471328609317 1491.0867930045206 993.2079703917788 1158.080131163474 963.9376897724711 1131.3461349441677 1029.4153537228267 0.8438242883386549 1.277410348029096 0.8910771776586197 1.2692909061327824 1.2214186706209516 1.448479263119676 0.9648272359644668 1.1249882051742652 0.9363933482111384 1.099018127962356 1.0 10.007609490266123 -8.40325473209809 1.8697846588914557 0.9716229076190456 1.1528525769784939 0.058143463047396815 0.1758620799580683 0.415615538212097 2.8345854501317658 0.0287948806085407 0.03529585711391985 3.951347888049614e-09 8.40325473209809 0.1812296693594483 VQKS(ph)PPEPEIINQVQQNELK ddPTM_A549_PD325901_60min_R1 2 VQKSPPEPEIINQVQQNELK 20 1 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 VQKS(1)PPEPEIINQVQQNELK;VQKS(1)PPEPEIINQVQQNELK 149.18 9.1306e-22 7757700.0 3139.4 3427.0 3529.5 3401.1000000000004 4082.0 3249.0 2947.2 3535.3999999999996 3998.5 3713.7000000000003 3384.9 True False 3458.109576895868 3715.8053170575454 3769.033094607676 3611.178222541467 3795.29440213551 3222.5412212025153 3059.357308769721 3464.883673532354 3830.4569501583082 3479.216348215993 2968.5787586489973 1.1649041032920604 1.2517118861109857 1.2696422770076567 1.2164670423583162 1.2784887013955297 1.0855501851899987 1.030579801818038 1.1671860358891826 1.2903336113277157 1.1720141626962888 1.0 11.53555667407153 -7.259970655746291 24.973351719412545 1.1307024771691272 1.2378590690677853 0.33851827975327875 0.07763499250892268 179.49850351991765 3052095.4107925748 0.016588043742893233 0.027763661862691 5.495780062926509e-08 7.259970655746291 0.10715659189865812 VQKS(ph)PPEPEIINQVQQNELKK ddPTM_A549_MK2206_60min_R1 2 VQKSPPEPEIINQVQQNELKK 21 2 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 VQKS(1)PPEPEIINQVQQNELKK;VQKS(1)PPEPEIINQVQQNELKK 66.447 0.00025344 8733400.0 2536.3 2802.5 3997.5 3722.6000000000004 4145.1 3987.7 2999.4 3569.1 4733.6 4414.200000000001 4778.6 True False 2964.365433418496 2945.135279554674 4564.405609957006 4634.637167113866 3535.3612809807687 4409.675767178971 3544.3521551375384 4075.0308549103333 3661.4471580059144 3417.0291542049586 3591.9417373493275 0.8252821593943918 0.8199284662473495 1.270734868134389 1.2902874005228144 0.9842479470699009 1.227657932567996 0.9867510149964437 1.134492470336532 1.019350375295307 0.9513041702971926 1.0 11.810548233872858 -8.964386776701717 19.61938489901807 1.0085364284871903 1.073487746282115 0.04378847102961814 0.1531880206301215 53.23507192149114 29327.799970797514 0.026953259480599803 0.0285303436381201 1.0854584985938585e-09 8.964386776701717 0.0649513177949248 VQKS(ph)PPEPEIINQVQQNELKK ddPTM_A549_PD325901_60min_R1 2 VQKSPPEPEIINQVQQNELKK 21 2 A0A3B3ITL0;A0A3B3IRJ9;Q9Y2H2-4;Q9Y2H2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 VQKS(1)PPEPEIINQVQQNELKK;VQKS(1)PPEPEIINQVQQNELKK 106.88 1.4171000000000002e-10 15193000.0 5360.5 5026.799999999999 5614.7 5963.4 6987.2 5844.2 5007.4 5841.7 6619.0 5796.4 6981.2 True False 5904.694013808473 5450.4260775561315 5995.7473059339045 6331.745674135955 6496.443176531414 5796.606772838337 5197.959347154421 5725.182710775002 6340.826448192528 5430.414314780191 6122.55665747301 0.9644163940241173 0.8902206026796835 0.9792881701822512 1.0341669384811025 1.061067057436218 0.9467624551523213 0.8489850952722418 0.9350967301849327 1.035650105491977 0.8869520722445237 1.0 12.579918504056018 -8.763867923692136 24.999621114738805 1.0168347733598073 0.95801668742674 0.0 0.06846020660771017 87.1468981125246 897093.9610621011 0.010586331835354587 0.011532563128109621 1.722392304017425e-09 8.763867923692136 -0.058818085933067366 VQMPS(ph)FK ddPTM_A549_MK2206_60min_R1 2 VQMPSFK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VQMPS(1)FK;VQMPS(1)FK 78.149 0.016905 8628500.0 3448.5 6695.599999999999 4845.0 3557.0 5585.9 4540.1 4048.3 5018.5 5976.6 5204.9 5920.5 True False 4030.5224922697175 7036.377440780112 5532.0938537189995 4428.465159679796 4764.221509596982 5020.530368525529 4783.823707956023 5729.887743511673 4622.909642669036 4029.109475039956 4450.276452512595 0.9056791269661715 1.5811101885159118 1.243089932221091 0.9950988903575901 1.0705450684770688 1.128138986891696 1.0749497832331538 1.2875352362158576 1.038791565422632 0.9053616147296083 1.0 12.119679244175005 -7.443727305562357 0.20885747271307858 0.9612725311890835 1.3061705305361395 0.14754246325792075 0.1734585859382314 5.804425897471879 0.5903126987736393 0.24910110392343354 0.6127590322340648 3.5997529346812076e-08 7.443727305562357 0.344897999347056 VQMPS(ph)FK ddPTM_A549_PD325901_60min_R1 4 VQMPSFK 7 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VQMPS(1)FK;VQMPS(1)FK;VQMPS(1)FK;VQMPS(1)FK 57.59 0.019400999999999998 40077300.0 13811.0 16074.5 15353.2 15735.6 17823.4 16864.6 15699.499999999998 17049.300000000003 16441.7 16296.3 19444.1 True False 15213.082552879163 17429.154528462655 16395.160478291687 16707.552273859495 16571.54587139199 16727.260289040303 16296.953063596044 16709.23833658289 15750.712526551913 15267.348836856037 17052.598966305348 0.8921269176000133 1.0220820042095256 0.9614464346864247 0.9797657416838549 0.9717900423352545 0.980921460833748 0.955687346884636 0.979864615921543 0.9236546615371731 0.8953092057711067 1.0 14.057704014989866 VQMT(ph)WTR ddPTM_A549_MK2206_60min_R1 2 VQMTWTR 7 0 A0A0G2JNW7;Q9Y666;A0A0G2JQE3;H0YB78;A0A0U1RR18 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 VQMT(0.914)WT(0.086)R;VQMT(0.952)WT(0.048)R 107.21 0.0098664 18450500.0 5491.6 4216.9 3250.7 3324.7 6682.0 5330.4 4688.9 5143.8 7151.700000000001 6787.4 7628.4 True False 6418.447823270522 4431.522198163821 3711.698140409566 4139.251649251452 5699.086651591873 5894.459389966842 5540.812435895315 5872.949402226833 5531.851368918139 5254.121625945974 5734.057746870549 1.1193552814799415 0.7728422687375957 0.6473074224680215 0.7218712876602112 0.9939011609539926 1.027973496287831 0.9662986807063983 1.0242222282173712 0.9647359013670961 0.9163007869625124 1.0 12.485340718487866 -6.7758147764679 24.828637922406344 0.9888640061506514 0.8003056122705599 0.33756426964462816 0.11337518415557876 160.84262505958418 277801.22652813344 0.015553571151358934 0.029490707279924037 1.6756573796990294e-07 6.7758147764679 -0.18855839388009155 VQMT(ph)WTR ddPTM_A549_PD325901_60min_R1 2 VQMTWTR 7 0 A0A0G2JNW7;Q9Y666;A0A0G2JQE3;H0YB78;A0A0U1RR18 A0A0G2JNW7 SLC12A7 Solute carrier family 12 member 7 1 VQMT(0.991)WT(0.009)R;VQMT(0.995)WT(0.005)R 111.06 0.020222999999999998 4739100.0 1951.1 2205.2 2143.8 2399.1 2581.1 2390.5 2147.3 1737.2 2471.9 2496.1 3123.7 True False 2149.1742356760938 2391.039943150074 2289.2911597166544 2547.2869582485764 2399.8124403116035 2371.0325605677504 2229.016676547647 1702.5501831929635 2368.0146392638044 2338.4958200129104 2739.504702765777 0.7845119716371753 0.8728000870873132 0.835658780729746 0.9298348550659031 0.8760023072377925 0.8654968024599408 0.8136568169776287 0.6214810222716849 0.864395172190462 0.853619932702429 1.0 11.41969936490793 -10.077259884660466 1.0551194280727094 0.9836593344314791 0.8328873259692965 0.09479178178012637 0.08532486413689133 0.35962626506252504 0.8037494832998879 0.02919830485697793 0.015080363855047005 8.370282490484449e-11 10.077259884660466 -0.15077200846218264 VQMTS(ph)PSSTGSPMFK ddPTM_A549_PD325901_60min_R1 1 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.182)S(0.707)PS(0.084)S(0.01)T(0.015)GS(0.002)PMFK 66.285 0.00096691 4346500.0 681.94 1065.9 1100.0 1364.1 1293.2 1250.3 1141.9 1210.1 1288.5 1338.1 1625.0 True False 751.1700467823052 1155.727133776376 1174.6526148373541 1448.3573589041237 1202.3700932978063 1240.1179713356441 1185.3556293716556 1185.9636061949147 1234.3488258794484 1253.6121376384258 1425.135301723721 0.5270868287900486 0.8109595856467157 0.8242393640916728 1.0162946333252114 0.8436883795128244 0.8701756035624857 0.8317495384037932 0.8321761483000772 0.86612746480035 0.879644294911623 1.0 10.476883179279454 -4.890371191699651 1.2260578807302926 0.9131180930810233 8.195492627279246e-08 0.7080526557553836 0.0648882783207817 1.3956503098803876 0.951933764211922 0.011150604184474264 2.0080462588846997 1.2871489545977673e-05 4.890371191699651 -0.913118011126097 down VQMTSPS(ph)STGSPMFK ddPTM_A549_PD325901_60min_R1 1 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.109)S(0.114)PS(0.524)S(0.109)T(0.109)GS(0.035)PMFK 52.247 0.0056508 3941300.0 1403.3 1128.9 1249.3 1201.7 1687.8 1220.2 1428.1 1403.3 1234.8 1697.0 1879.9 True False 1545.7619829451403 1224.036364874894 1334.0850106511882 1275.9262797412846 1569.2547505939044 1210.263095756021 1482.4471269863059 1375.3100806324464 1182.9056501326684 1589.8511303881676 1648.684217667953 0.9375731061049428 0.7424322691741909 0.8091816470095394 0.7739058008003918 0.9518225102036819 0.7340781714207987 0.8991698416833348 0.8341864778555402 0.7174846689597577 0.9643151267845554 1.0 10.68709938190235 -11.007961045430422 1.2894455462687078 1.000017585607454 0.8107139759239148 0.380653159896458 0.07735636195964675 0.32478313769703004 0.9613114803103938 0.05358482888397725 0.012167374685725355 9.818360060402413e-12 11.007961045430422 -0.1893036096835392 VQMTSPSSTGS(ph)PMFK ddPTM_A549_PD325901_60min_R1 1 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.004)S(0.004)PS(0.123)S(0.118)T(0.118)GS(0.634)PMFK 55.841 0.0037673999999999997 3719200.0 1127.0 1174.3 1467.3 1250.9 1336.6 1261.2 1291.2 1081.8 1414.4 1201.9 1350.1 True False 1241.4122103464504 1273.2623822062078 1566.8798015916823 1328.1652519999775 1242.721827019678 1250.929205349527 1340.3373225717507 1060.2226503443171 1354.9576867084934 1126.0118288824633 1184.046258989043 1.0484490795202437 1.0753485115466173 1.3233265083152312 1.1217173669667142 1.0495551314698912 1.056486768023396 1.1319974303336353 0.89542333527539 1.1443452284249243 0.9509863489994635 1.0 10.209509730755977 -6.635873719121492 5.184080035040671 1.0594516400592042 1.1537666014597272 0.2035882424156682 0.09580916978525275 0.2873632255729128 11.959357031199024 0.013394501603818307 0.028305276600672048 2.3127371727121208e-07 6.635873719121492 0.09431496140052298 VQNHLPASGPTQPPVVS(ph)STNEGSPSPPEPTGK ddPTM_A549_MK2206_60min_R1 3 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 H3BQC4;O43294-2;O43294 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPAS(0.001)GPT(0.004)QPPVVS(0.233)S(0.233)T(0.233)NEGS(0.233)PS(0.063)PPEPT(0.002)GK;VQNHLPAS(0.003)GPT(0.003)QPPVVS(0.233)S(0.233)T(0.233)NEGS(0.233)PS(0.061)PPEPT(0.001)GK;VQNHLPASGPT(0.001)QPPVVS(0.244)S(0.244)T(0.244)NEGS(0.244)PS(0.023)PPEPTGK 66.501 0.00023921 17516900.0 1356.7600000000002 1183.8600000000001 1228.6000000000001 1297.29 1366.21 1423.22 1138.4 1018.67 2464.9199999999996 2277.3900000000003 2320.52 True False 1585.7479184027452 1244.1134173251007 1402.8339543197437 1615.1261082375604 1165.2423188074429 1573.8241957430234 1345.2325443117206 1163.0695920460378 1906.6195556683986 1762.9260172839533 1744.2708409060938 0.9091179427037828 0.7132570172868469 0.8042523680502597 0.9259606193947227 0.6680397857262443 0.9022820073776336 0.7712291650836258 0.6667941496068693 1.0930754048940987 1.0106951145088046 1.0 10.768408356023752 -8.772993848527607 24.99908839374114 1.0439522911527066 0.7955940006087382 0.5892792645510667 0.08894531187834005 97.32746124152403 210575.66517195 0.014761313434661333 0.0157791791628417 1.6865769143817714e-09 8.772993848527607 -0.2483582905439684 VQNHLPASGPTQPPVVS(ph)STNEGSPSPPEPTGK ddPTM_A549_PD325901_60min_R1 1 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 H3BQC4;O43294-2;O43294 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPASGPTQPPVVS(0.322)S(0.322)T(0.322)NEGS(0.03)PS(0.004)PPEPTGK 92.07 1.3474e-09 25623000.0 1455.9 1262.7 1681.0 1861.6 1680.7 2026.3 1874.2 1716.4 1721.2 1784.2 1453.2 True False 1603.7018962230675 1369.1121604460354 1795.0827686741752 1976.5868039996453 1562.6534301002341 2009.7984846176248 1945.523706601593 1682.1650555102485 1648.863949634233 1671.545307506523 1274.4656125937906 1.258332810533205 1.0742637125058403 1.4084983941001163 1.5509141905970287 1.2261244357310859 1.5769734897180048 1.526540761380031 1.3198983471093493 1.2937688811222354 1.311565640523322 1.0 10.315676732004396 -10.085671268631318 0.7333109319915565 1.0127831162438472 1.3693283652023698 0.10216118657739437 0.1680371036417066 0.44685633110023293 0.47411048364495345 0.08054128531798856 0.03179840297536449 8.209727296911018e-11 10.085671268631318 0.3565452489585226 VQNHLPASGPTQPPVVSSTNEGS(ph)PSPPEPTGK ddPTM_A549_MK2206_60min_R1 1 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 H3BQC4;O43294-2;O43294 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPAS(0.003)GPT(0.003)QPPVVS(0.209)S(0.209)T(0.209)NEGS(0.308)PS(0.057)PPEPTGK 70.616 9.9248e-05 8091400.0 310.42 255.08 140.83 317.78 250.18 344.49 165.0 302.7 495.99 562.41 592.95 True False 362.81130695965396 268.0624824652299 160.80181164483938 395.6361142656861 213.378853411442 380.94370314604515 194.9783642054057 345.6086519798711 383.6490569332755 435.3611903892914 445.7041504125229 0.8140182374874741 0.6014359126275216 0.3607814993331535 0.8876653131892621 0.4787454934264097 0.8547008206979035 0.43746140578889126 0.7754216595470155 0.8607706627326398 0.9767941132842076 1.0 8.799942585214152 -8.85150551326812 1.3121421602628922 0.9542608159228503 0.6320692354083345 0.4065999582393298 0.16455682753551093 0.260493061681312 0.8921381186496645 0.03163889925451498 0.032517079554703836 1.4076493584654142e-09 8.85150551326812 -0.3221915805145158 VQNHLPASGPTQPPVVSSTNEGS(ph)PSPPEPTGK ddPTM_A549_PD325901_60min_R1 1 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 H3BQC4;O43294-2;O43294 H3BQC4 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPASGPTQPPVVS(0.18)S(0.18)T(0.18)NEGS(0.434)PS(0.024)PPEPT(0.001)GK 87.37200000000001 2.1232e-09 25140000.0 1599.1 1293.3 1305.1 1656.6 1505.5 2369.8 2100.8 1593.4 1805.8 1757.9 1826.3 True False 1761.4394548047994 1402.2909298367447 1393.671934203846 1758.9244195884257 1399.758873693045 2350.501134504686 2180.7470936018703 1561.6183870018808 1729.9085058386568 1646.9058939949098 1601.6766778695571 1.099747208124269 0.8755143589291554 0.8701331257801761 1.0981769566177544 0.8739334804792876 1.4675253545123508 1.3615401433593664 0.9749897770123249 1.0800609946694517 1.0282386681096671 1.0 10.645367232463968 VQNS(ph)PPVGR ddPTM_A549_MK2206_60min_R1 2 VQNSPPVGR 9 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;H0Y8P9;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 VQNS(1)PPVGR;VQNS(1)PPVGR 141.89 3.8623e-05 301690000.0 12852.8 13781.2 13235.8 12867.099999999999 16295.699999999999 12945.4 12658.2 12855.0 17271.9 18317.0 19762.2 True False 15022.038419209579 14482.604215735548 15112.835465233014 16019.54007762607 13898.624116783263 14315.273635538944 14958.03108960525 14677.235616786402 13359.842227556695 14179.176978291009 14854.700331026841 1.0112649925245023 0.9749509510794977 1.0173773370349997 1.0784155668334987 0.9356381352071685 0.9636864639833089 1.006956098492447 0.988053295570711 0.8993680067481501 0.9545246058363847 1.0 13.858631881033633 -6.788960556923006 24.999266845189588 0.9582754204914882 1.0170254177000861 0.3493473257481222 0.036426366662590054 217.5049046547877 197573.30595514723 0.006635366678187808 0.012541540934122443 1.6256963964851952e-07 6.788960556923006 0.05874999720859797 VQNS(ph)PPVGR ddPTM_A549_PD325901_60min_R1 2 VQNSPPVGR 9 0 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;H0Y8P9;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 VQNS(1)PPVGR;VQNS(1)PPVGR 146.71 2.9583e-05 338810000.0 13590.4 14068.5 12874.599999999999 14027.099999999999 15587.1 14407.6 14289.699999999999 15300.1 15545.6 14904.3 16420.3 True False 14970.087403276313 15254.10186840505 13748.347777259081 14893.52210914452 14492.315868575797 14290.269282424555 14833.502353123875 14994.927502803748 14892.27249328022 13963.239954416254 14400.707196857851 1.0395383503487035 1.059260608516046 0.9546994872764921 1.034221577145475 1.006361400899668 0.9923310770142321 1.0300537432189758 1.0412632725478617 1.0341348025275887 0.9696218222854327 1.0 13.81385204151894 VQNS(ph)PPVGRK ddPTM_A549_MK2206_60min_R1 2 VQNSPPVGRK 10 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;H0Y8P9;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 VQNS(1)PPVGRK;VQNS(1)PPVGRK 94.191 0.00024399 26685000.0 4968.1 6450.0 6269.1 5046.799999999999 7313.5 5477.1 4931.4 4198.3 10109.3 10210.4 10709.2 True False 5806.593821616702 6778.2774498225335 7158.152647750211 6283.2662265594645 6237.6938381348655 6056.68308659527 5827.371546924468 4793.421881754519 7819.5596912348265 7903.863548569228 8049.810081116098 0.7213330206681875 0.8420419092524394 0.8892324881729061 0.7805483810480527 0.7748870812204324 0.7524007430688994 0.7239141654527715 0.5954701829549146 0.9713967922769492 0.9818695682163678 1.0 12.974739030837897 -8.881971766833626 9.515075962598305 0.9873728693104554 0.7668632059499131 0.6677448939192446 0.07045246725527801 0.12462888015353427 9.875957692225604 0.012758789502085649 0.0135670544061194 1.3122852069470083e-09 8.881971766833626 -0.22050966336054234 VQNS(ph)PPVGRK ddPTM_A549_PD325901_60min_R1 2 VQNSPPVGRK 10 1 O95359-3;E7EMZ9;E9PBC6;O95359;O95359-5;O95359-1;O95359-6;E9PGB3;Q4VXL8;D6RAA5;H0Y8P9;H0YA73 O95359-3 TACC2 Transforming acidic coiled-coil-containing protein 2 1 VQNS(1)PPVGRK;VQNS(1)PPVGRK 88.021 0.00029801 67614000.0 8061.5 6744.700000000001 7824.3 8101.3 8250.3 10922.6 9862.0 10425.0 9545.5 9739.599999999999 11598.3 True False 8879.89754543736 7313.099539526707 8355.304049338103 8601.698901612774 7670.827389989858 10833.649966976487 10237.30380669347 10217.065196745709 9144.335830370417 9124.639993829467 10171.782627681367 0.8729932471493947 0.7189594791010305 0.8214198390948779 0.8456432089105221 0.7541281278578015 1.065068962198811 1.0064414647275095 1.0044517830081339 0.8989904882046075 0.8970541671818449 1.0 13.312284916438735 -7.250458415393697 24.9992276048445 0.9670960145263633 0.8014141204688082 0.678387995264299 0.06006350482477357 367.4463029991255 836526.8561066044 0.009154176859134016 0.015757712310461518 5.617480643343194e-08 7.250458415393697 -0.16568189405755507 VQPNEAVY(ph)TK ddPTM_A549_MK2206_60min_R1 1 VQPNEAVYTK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VQPNEAVY(0.781)T(0.219)K 160.36 1.0149999999999998e-08 18102000.0 14267.0 16512.0 15043.0 14654.0 21572.0 16510.0 15521.0 16688.0 21513.0 20553.0 22627.0 True False 16674.920805339145 17352.39027154568 17176.32359989575 18244.230657843065 18398.787376255605 18257.077241548963 18340.96479292182 19053.575104856598 16640.33984920171 15910.063025321564 17008.091426569124 0.9804110518415066 1.0202432381353919 1.0098913022694493 1.07267947944723 1.0817667258957704 1.0734348013339545 1.07836701561179 1.1202653270720386 0.9783778456886155 0.935440822035312 1.0 14.053933636722977 -8.802505995582575 24.999585228254162 0.9897895117377401 1.0549187347449258 0.43751032861434047 0.04064103979232296 115.70876643812058 70438.02447875151 0.006861855567040656 0.007305035027394034 1.5757742684957034e-09 8.802505995582575 0.06512922300718571 VQPNEAVY(ph)TK ddPTM_A549_PD325901_60min_R1 1 VQPNEAVYTK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VQPNEAVY(0.965)T(0.035)K 113.69 0.00010712 39531000.0 10825.0 9629.4 9727.1 11368.0 11781.0 9558.2 10980.0 11588.0 11311.0 11873.0 14170.0 True False 11923.946031056188 10440.903332382239 10387.239499804025 12070.175541398785 10953.54320224362 9480.36118821111 11397.849908486542 11356.868249389861 10835.638005062052 11123.336753741141 12427.179831030848 0.9595053900549442 0.8401667533860862 0.835848490247718 0.9712723003540499 0.8814182582996396 0.7628730988939673 0.9171710769024156 0.9138733327920142 0.8719305709252961 0.8950813382426485 1.0 13.601211314281656 -10.769860847240023 0.6714648391066598 1.0145911403066405 0.8798108470522025 0.03476381583773247 0.06389753438378602 0.8259845865763211 0.5437897595740382 0.06550817277480397 0.011030767264706236 1.6987878757117808e-11 10.769860847240023 -0.13478029325443808 VQPNEAVYT(ph)K ddPTM_A549_MK2206_60min_R1 1 VQPNEAVYTK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VQPNEAVY(0.021)T(0.979)K 160.22 1.0363e-08 18793000.0 8837.5 10114.0 9605.8 9329.7 13630.0 9462.3 10036.0 9715.3 14456.0 13624.0 15182.0 True False 10329.053943869398 10628.759399613187 10968.046881332079 11615.476918826149 11625.045055551824 10463.5943054336 11859.411291911825 11092.47352685842 11181.739081488398 10546.328937721066 11411.890398116073 0.9051133145806032 0.931375874532394 0.961106924330673 1.0178398594455205 1.0186782951815712 0.9169028040403349 1.0392153164973992 0.9720101700844951 0.97983232325245 0.9241526661929825 1.0 13.47825017574105 -5.799836890351381 2.4214593934025967 0.99063691225055 0.9110632144016967 0.31154339466261094 0.03638365198764782 0.18124988084987295 2.0584682150845652 0.003904549568024772 0.0189155364327945 1.5854885486851225e-06 5.799836890351381 -0.07957369784885326 VQPNEAVYT(ph)K ddPTM_A549_PD325901_60min_R1 1 VQPNEAVYTK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VQPNEAVY(0.235)T(0.765)K 117.27 7.918e-05 38447000.0 12441.0 10806.0 11719.0 12362.0 14337.0 12532.0 12363.0 13807.0 13063.0 13329.0 14673.0 True False 13704.001161419865 11716.659543660304 12514.321812071783 13125.572663860987 13330.018579964932 12429.943546971357 12833.48073029319 13531.608553618029 12514.007537806163 12487.404665258624 12868.314019810554 1.0649414632190966 0.9105046337556499 0.9724911742755262 1.0199916355518204 1.035879180399514 0.9659341175414019 0.9972930960913964 1.051544789223075 0.9724667519413233 0.9703994358572905 1.0 13.65153542653522 VQPNEAVYTK ddPTM_A549_MK2206_60min_R1 2 VQPNEAVYTK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 180.07 4.146100000000001e-11 27604000.0 7672.8 7948.9 7689.9 6652.7 9394.099999999999 6928.0 7327.4 7478.1 11230.8 10563.900000000001 11132.7 False True 8967.78105805049 8353.465057503 8780.443452159694 8282.611798651049 8012.240334289022 7661.1163615657915 8658.693732598118 8538.14357572076 8687.041731902324 8177.507653052816 8368.143343110714 1.0716571992559667 0.9982459328185624 1.0492702015421875 0.9897789102130903 0.9574692982386949 0.9155096952148889 1.0347210100943844 1.0203151673722228 1.0381086192858002 0.9772188785204254 1.0 13.030691849275593 -3.040983792821403 1.5230002719979203 1.008101379772088 61.627531008234634 0.18787109362681198 0.03838636335781814 2012.6877754449881 6.120477100202045 0.005688409484937635 425806.2297291627 0.0009099472297804654 3.040983792821403 60.61942962846255 VQPNEAVYTK ddPTM_A549_PD325901_60min_R1 2 VQPNEAVYTK 10 0 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 178.08 1.4162e-10 44159000.0 9912.0 9819.0 9478.6 10762.1 11608.1 10701.0 10602.9 11088.599999999999 10972.400000000001 11259.5 11519.7 False True 10918.25894317127 10646.48158978349 10121.874795452135 11426.850474497527 10792.787101770997 10613.854603905245 11006.39916162951 10867.429174161582 10511.268185548834 10548.573248441711 10102.849929394923 1.080710791457355 1.0538097333116703 1.001883118742748 1.1310521837259342 1.0682913412747679 1.050580249937547 1.0894350840158131 1.0756795607289051 1.0404260440378899 1.044118572696 1.0 13.30247470213339 -9.542998678981602 0.8564814747396349 1.0063493407984314 1.0681958075277862 0.20718521142270407 0.03215539691488238 0.36345343187967327 0.5666883867162137 0.009670713450617147 0.006385103266105329 2.8641866820539935e-10 9.542998678981602 0.06184646672935479 VQPS(ph)PTVHTK ddPTM_A549_PD325901_60min_R1 2 VQPSPTVHTK 10 0 O43683-2;O43683-3;O43683 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 VQPS(0.729)PT(0.271)VHTK;VQPS(0.98)PT(0.02)VHTK 90.861 0.00020076 25571000.0 6551.6 6311.9 6175.4 6335.4 6955.9 5944.200000000001 6501.4 6188.3 7027.4 7032.0 6777.0 True False 7216.713608966996 6843.825964614973 6594.499779696909 6726.723269262652 6467.341580552281 5895.79240599323 6748.814334702588 6064.869501872562 6732.062816441782 6587.998319911374 5943.471962942555 1.2142252296238765 1.151486203230386 1.1095366177906618 1.1317834611155997 1.0881420188193103 0.991977827564998 1.1355003231749605 1.0204253573814965 1.132681849669028 1.1084427353216149 1.0 12.537090232590515 -2.0000001618639796 0.013108953254928592 8.53333997556583e-09 2.4110235262990973 0.26578010249051476 0.05619908894503039 4485.132731786026 4.417512442151452 332.42991381768917 495.3897564409966 0.00999999627294483 2.0000001618639796 2.4110235177657575 VQQLVPK ddPTM_A549_PD325901_60min_R1 2 VQQLVPK 7 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 118.01 0.019207 16010700.0 12078.3 12164.9 12412.900000000001 12310.3 15586.099999999999 13597.6 13383.4 14508.3 14725.3 14033.2 14227.8 False True 13304.480124425494 13190.078815720264 13255.314038831448 13070.679272280207 14491.386105125996 13486.865653869909 13892.712610677485 14218.920574958825 14106.446849610138 13147.141357079097 12477.870797455238 1.06624602389206 1.0570776881589665 1.0623057614552927 1.0475087845071989 1.1613668982757377 1.0808627427541924 1.1133880800810017 1.1395309989793019 1.1305171433965349 1.0536365995839894 1.0 13.60708415573519 -3.8791258118109804 14.579942388696217 1.0764150712869567 0.4961443034776636 0.0 0.04610695515262066 0.0 0.0 0.0076257528946468475 0.0 0.0001320912920319882 3.8791258118109804 -0.5802707678092931 VQRPEDASGGS(ph)SPSGTSK ddPTM_A549_MK2206_60min_R1 1 VQRPEDASGGSSPSGTSK 18 1 Q9UI08-4;Q9UI08-3;Q9UI08;Q9UI08-2;H0YJN0;Q9UI08-5;G3V314;H0YJL6 Q9UI08-4 EVL Ena/VASP-like protein 1 VQRPEDAS(0.006)GGS(0.547)S(0.444)PS(0.003)GT(0.001)SK 55.126999999999995 0.0029479 3838800.0 828.99 1306.0 1126.0 1095.7 1429.4 1191.1 857.34 1046.4 1460.1 1520.6 1852.7 True False 968.9032451404008 1372.4698216229815 1285.6837315351067 1364.1465491878419 1219.1371535147305 1317.141411411809 1013.1075804112877 1194.7304044656 1129.3896813005815 1177.095403897435 1392.6234580812577 0.6957395694564458 0.9855282945714244 0.923209877066489 0.9795516090669254 0.8754248296193754 0.9457986678082767 0.7274813407258965 0.8578990950731846 0.8109799348465974 0.8452359444808039 1.0 10.44358951489626 -10.958537550003282 1.2437749712400445 0.9994537698896033 0.8676367433189689 0.0 0.10006960105879473 0.5512083909513465 1.52618081214889 0.0609206352477692 0.014402364182109148 1.1001767176183754e-11 10.958537550003282 -0.13181702657063443 VQRPHS(ph)SPPR ddPTM_A549_MK2206_60min_R1 3 VQRPHSSPPR 10 1 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 VQRPHS(0.543)S(0.457)PPR;VQRPHS(0.874)S(0.126)PPR;VQRPHS(0.891)S(0.109)PPR 62.89 0.0028709 48374000.0 3425.7000000000003 3120.4500000000003 2812.5 2192.33 3448.5600000000004 2586.8 2580.63 3011.7000000000003 4201.4 4271.6 3933.7 True False 4003.874409676202 3279.267576480422 3211.3547912455465 2729.4509484174328 2941.2813922798096 2860.53345902113 3049.497066784219 3438.617697944427 3249.7896082571515 3306.642593244958 2956.8537254030553 1.3540995874357717 1.109039499758622 1.0860715779262295 0.9230929906907638 0.9947334787008705 0.9674247442291737 1.031331729596646 1.1629312834796053 1.0990701299619297 1.1182976570118368 1.0 11.529847160228773 -5.1910880051350174 1.9101225187503101 1.0390872097736819 1.4898311255698484 0.644157044868091 0.0668017252773534 0.4841611930163349 1.5674009111474332 0.009811835088574203 0.4083258612165385 6.440387447231714e-06 5.1910880051350174 0.45074391579616657 VQRPHS(ph)SPPR ddPTM_A549_PD325901_60min_R1 1 VQRPHSSPPR 10 1 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 VQRPHS(0.626)S(0.374)PPR 91.85799999999999 0.00017628 152870000.0 3267.6 3222.3 2686.6 2839.1 3584.5 3181.6 3533.8 3273.4 3303.7 3551.8 3211.3 True False 3599.3243465200158 3493.854529662836 2868.928831838216 3014.464758936073 3332.7370858536824 3155.6901044561178 3668.2806927695597 3208.109469067376 3164.85697792622 3327.538741846019 2816.330458107928 1.27801918136344 1.2405698058636498 1.0186762081057863 1.0703519362430416 1.1833615179138772 1.1204970976936346 1.3025036469740099 1.139109744679129 1.1237519975026085 1.181515731673595 1.0 11.459600909227621 -10.00690686113803 0.6891016630395458 1.0043669600770893 1.165389033278362 0.0 0.09583808416149703 0.5787421874675407 0.5494787157040537 0.04539430417806004 0.018319257959166616 9.842221595660539e-11 10.00690686113803 0.16102207320127282 VQRPHSS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 VQRPHSSPPR 10 1 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 VQRPHS(0.042)S(0.958)PPR;VQRPHS(0.092)S(0.908)PPR 114.82 2.591e-05 186168000.0 5933.0 6037.0 5242.200000000001 4374.700000000001 7634.1 6505.700000000001 5418.2 5571.299999999999 9025.2 8291.9 9068.5 True False 6934.345352076626 6344.257513888157 5985.622786370636 5446.501696387749 6511.13400283112 7194.128855865843 6402.616805683205 6361.048836390675 6981.006610282867 6418.754031025342 6816.541172132502 1.0172821049516627 0.9307150582211484 0.8781026381592413 0.7990125136563729 0.9551961674419348 1.0553928560245482 0.9392764811365756 0.9331783782655083 1.0241274033262993 0.941643843840715 1.0 12.734824161798445 -6.997907831744622 24.937524580317998 1.0020176082746135 0.9023977041967606 0.2188368496049743 0.06100756796579869 53.45309676706978 637112.3153706809 0.008511056278696258 0.01601033359802895 1.004829017741851e-07 6.997907831744622 -0.09961990407785293 VQRPHSS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 VQRPHSSPPR 10 1 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 VQRPHS(0.287)S(0.713)PPR;VQRPHS(0.041)S(0.959)PPR 109.6 5.8316e-05 201946000.0 6042.0 5824.0 5427.5 5650.299999999999 6117.4 6003.799999999999 5574.4 5712.8 5917.5 6374.5 6682.6 True False 6655.379392114683 6314.808919329778 5795.842788208853 5999.306198237647 5687.734927884313 5954.907043353547 5786.536842428727 5598.853722395096 5668.808053660569 5972.012982121021 5860.682564491653 1.1355979988470781 1.077486939420599 0.9889364804236886 1.0236531551095907 0.9704901886931764 1.0160773899328341 0.987348620020447 0.9553245139597034 0.9672607228390767 1.0189961521383004 1.0 12.51685298259656 -5.334812463735262 1.152341929496992 0.9844160288486676 1.202226019656477 0.799302257588148 0.02259393684280341 0.39055831335849617 0.4567472350492374 0.0030547910558497812 0.09878420235861826 4.625807290587391e-06 5.334812463735262 0.21780999080780927 VQRPKEES(ph)SEDENEVS(ph)NILR ddPTM_A549_PD325901_60min_R1 1 VQRPKEESSEDENEVSNILR 20 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 2 VQRPKEES(0.991)S(0.18)EDENEVS(0.829)NILR 115.58 3.2004e-14 34581000.0 5736.1 6934.1 6650.5 5842.0 6972.9 7722.9 7738.3 8666.7 7605.1 7282.1 7882.5 True False 6318.424649306366 7518.460942226069 7101.842922705296 6202.847071855361 6483.147559199095 7660.00726291933 8032.785241060236 8493.835869605377 7285.484094447655 6822.306963229036 6913.002471284449 0.9139913771985663 1.0875825624909874 1.0273167053252565 0.8972725089598963 0.9378193608535647 1.1080579378841284 1.1619821162262263 1.228675370056277 1.0538813091287667 0.9868804461690636 1.0 12.755096726046972 -7.257861293091486 24.970607812320164 1.0595139023349143 0.9780066301377942 0.29183391342521836 0.08366081429950104 472.87334879489583 3300063.636023108 0.01383428201902109 0.023371135052596154 5.5225379239621443e-08 7.257861293091486 -0.08150727219712006 VQRPKEESS(ph)EDENEVSNILR ddPTM_A549_MK2206_60min_R1 1 VQRPKEESSEDENEVSNILR 20 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 VQRPKEES(0.222)S(0.778)EDENEVSNILR 129.08 2.1356999999999998e-17 15887000.0 5131.4 5314.4 5373.4 5122.1 7285.0 5381.3 5100.1 5635.0 8261.9 8159.2 8454.2 True False 5997.454869315015 5584.880260362302 6135.428919210249 6377.014729939804 6213.386150381142 5950.745594182162 6026.722153236302 6433.77850646374 6390.592841543238 6316.0310531894975 6354.788815949998 0.9437693435636909 0.8788459258228551 0.9654811665512513 1.0034975063111493 0.9777486444216766 0.9364190953515684 0.9483748914062611 1.0124299473674852 1.0056341802426818 0.9939010148278694 1.0 12.633628466659575 -4.153211869150263 0.25861379099549303 1.0069163978268547 0.7649440013549329 0.39500326557624377 0.02997361311342239 10.438649678544527 0.3312836793800735 0.014927877301283842 0.8927435117841315 7.027294119896814e-05 4.153211869150263 -0.2419723964719218 VQRPKEESS(ph)EDENEVSNILR ddPTM_A549_PD325901_60min_R1 3 VQRPKEESSEDENEVSNILR 20 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 VQRPKEES(0.174)S(0.826)EDENEVSNILR;VQRPKEES(0.264)S(0.736)EDENEVSNILR;VQRPKEES(0.142)S(0.858)EDENEVSNILR 91.175 1.18e-06 37341400.0 10231.300000000001 9779.8 9972.7 11008.3 11704.5 12373.0 11373.6 11128.6 11658.8 12049.099999999999 12351.9 True False 11269.974044115032 10603.97806821109 10649.50739271681 11688.257689336757 10882.416298332953 12272.238390255081 11806.428571872728 10906.631342782184 11168.821180569128 11288.317769687725 10832.694605145372 1.040366635902572 0.9788864594386659 0.9830894141203288 1.0789797105315795 1.0045899653779553 1.1328887998398798 1.0898884351696618 1.0068253320463492 1.0310288979497402 1.042060002718616 1.0 13.403104533847328 -4.920745358000386 20.07975566470078 1.0257496865213334 1.611004487715177 0.0 0.04690887963483878 1913.7022415390995 695376.0556074227 0.006415699363567426 122903.49876929232 1.2002028176475755e-05 4.920745358000386 0.5852548011938437 VQRPS(ph)LK ddPTM_A549_MK2206_60min_R1 2 VQRPSLK 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VQRPS(1)LK;VQRPS(1)LK 70.55199999999999 0.0059058 218350000.0 12553.6 25839.0 16480.4 10064.6 22318.0 15532.0 11963.8 16477.6 19621.4 20718.6 21347.8 True False 14672.340773947259 27154.094732707646 18817.568533917565 12530.427451817059 19035.051764475822 17175.58593069282 14137.46759806443 18813.350260533625 15177.184228937223 16038.253870307364 16046.55209069307 0.9143609599757665 1.6922074336739854 1.1726860965248522 0.7808797417038051 1.186239365122933 1.0703599024649404 0.8810283678488227 1.1724232192811865 0.9458221394326775 0.9994828658306902 1.0 13.969975719511972 -6.001760022727322 24.993589835605643 0.9924345968950486 1.3355748470289337 0.2544982427673207 0.20001884578561943 51.483310159445715 731150.1297531489 0.02364942317454435 0.07202986284971569 9.959555986147966e-07 6.001760022727322 0.34314025013388505 VQRPS(ph)LK ddPTM_A549_PD325901_60min_R1 6 VQRPSLK 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VQRPS(1)LK;VQRPS(1)LK;VQRPS(1)LK;VQRPS(1)LK;VQRPS(1)LK;VQRPS(1)LK 72.607 0.0054748999999999996 511978000.0 33630.6 37339.90000000001 35358.200000000004 35393.5 45105.49999999999 37858.2 37604.9 40169.100000000006 33497.799999999996 36949.49999999999 43938.2 True False 37044.75375446081 40486.66441739046 37757.8200781292 37579.676110529355 41937.4452855275 37549.895371046216 39035.97504769088 39367.895788450674 32090.003957737372 34616.50226415888 38534.07994719827 0.96135041514477 1.0506716255550343 0.9798552380092442 0.975232214237976 1.0883209185996585 0.9744593726514129 1.0130247069913267 1.0216384001485166 0.8327694342698474 0.8983347289358539 1.0 15.233847324642968 -8.716523925511915 24.999873544425302 0.9210298813603395 1.0091741510598966 0.4206417677637718 0.05063380458968377 126.14689748892508 70213.02861484796 0.011154735675012226 0.012648253028078465 1.92077314243241e-09 8.716523925511915 0.08814426969955713 VQS(ph)LKDKNEATVSTGK ddPTM_A549_PD325901_60min_R1 2 VQSLKDKNEATVSTGK 16 2 E9PJ90;E9PN23;G5E991;E9PMN1;E9PLR4;Q9Y450-2;Q9Y450-4;Q9Y450 E9PJ90 HBS1L HBS1-like protein 1 VQS(1)LKDKNEATVSTGK;VQS(1)LKDKNEATVSTGK 92.29 1.8034e-06 19502700.0 7941.6 6967.1 6613.8 6343.6 8612.6 7037.8 6920.1 6954.9 7377.9 8207.3 8655.7 True False 8747.825385703078 7554.24196803958 7062.652240010269 6735.429764639102 8007.680687857005 6980.4864901751525 7183.448192324024 6816.179063486502 7067.832520338365 7689.089677333419 7591.103773003081 1.1523785798863333 0.9951440783757171 0.9303854157715258 0.8872793688571234 1.0548769885527627 0.9195614628534626 0.9462982468861987 0.8979167282269921 0.9310678304088434 1.012907991678208 1.0 12.890093958453207 -5.286055369478806 3.1538928233211343 0.9563063174065664 1.1761571512593962 0.5812986749373533 0.0484872056742047 0.16897618332583478 2.636254028898171 0.006495966819087689 0.08844301488849687 5.1754084494213515e-06 5.286055369478806 0.21985083385282989 VQS(ph)LPSVPLSCAAYR ddPTM_A549_MK2206_60min_R1 1 VQSLPSVPLSCAAYR 15 0 Q96AD5-2;Q96AD5 Q96AD5-2 PNPLA2 Patatin-like phospholipase domain-containing protein 2 1 VQS(0.951)LPS(0.049)VPLSCAAYR 61.732 0.0051143000000000004 1302900.0 903.7 971.45 778.25 544.24 1389.6 945.7 787.21 759.06 1446.1 1402.5 1309.6 True False 1056.2224666562695 1020.892655601566 888.6175524575455 677.5788244318624 1185.1916807919888 1045.7733462951453 930.2358671887115 866.6590795237565 1118.560658947176 1085.6742759214467 984.3901768787251 1.0729713597968928 1.0370813114354533 0.9027086752075761 0.6883234314469787 1.203985684365481 1.062356544039328 0.94498694627193 0.880401999003823 1.13629807084613 1.1028901968159315 1.0 9.943086451147536 -8.769898271112648 24.999355928449916 1.0643629701375594 0.9739296788369126 0.11517272809929746 0.12847799958352915 355.0083127830914 1049185.6436485343 0.023097273680126366 0.024781910112700766 1.6986414946624834e-09 8.769898271112648 -0.09043329130064681 VQS(ph)LRR ddPTM_A549_PD325901_60min_R1 2 VQSLRR 6 1 E9PIE3;Q969G5 E9PIE3 PRKCDBP Protein kinase C delta-binding protein 1 VQS(1)LRR;VQS(1)LRR 68.22399999999999 0.043154000000000005 33129000.0 8279.5 8538.8 8494.0 8506.0 10526.5 11465.7 8745.8 8899.5 9297.1 9301.099999999999 10371.4 True False 9120.028744954243 9258.394642921205 9070.453918571353 9031.396301472389 9787.154954453561 11372.32714064072 9078.626204885388 8721.99249097731 8906.375218536152 8713.826958664338 9095.78354972147 1.002665542237262 1.0178776344347722 0.997215233738616 0.9929211982786187 1.0760100986300694 1.2502855942508617 0.9981137034822463 0.9589050182756818 0.979176249066402 0.9580072910740244 1.0 13.150982207817167 -7.971161475061352 24.99991211584741 0.9871167171750892 1.0559728512973467 0.23709861570067037 0.0685910843219128 281.8303494092757 244316.15640993905 0.011039974404526044 0.015253782823160136 1.0686574677394517e-08 7.971161475061352 0.06885613412225755 VQS(ph)PEPPAPER ddPTM_A549_MK2206_60min_R1 2 VQSPEPPAPER 11 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 VQS(1)PEPPAPER;VQS(1)PEPPAPER 187.1 9.213299999999999e-19 108924000.0 5563.5 6105.4 5595.9 4995.9 8018.6 6411.5 5533.8 7598.8 7857.8 6790.6 6934.7 True False 6502.482785484294 6416.138781728138 6389.482764917676 6219.895724274469 6839.074562175193 7089.960674390744 6539.2198293325655 8675.95317034901 6078.020846328139 5256.598743723479 5212.622602016565 1.2474493708730672 1.2308849635970152 1.2257712197399115 1.1932373009065012 1.3120218140345352 1.3601523102109692 1.2544970792251084 1.6644122992891552 1.166019739080436 1.0084364714395209 1.0 12.347793696119377 -9.24727625503148 2.431262227304935 1.057245954910659 1.3036384869530941 0.43906480207467036 0.12756953133727367 0.18665049680576618 2.2706375714934715 0.02624166507988585 0.02419457953906231 5.658792183530561e-10 9.24727625503148 0.24639253204243516 VQS(ph)PEPPAPER ddPTM_A549_PD325901_60min_R1 2 VQSPEPPAPER 11 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 VQS(1)PEPPAPER;VQS(1)PEPPAPER 122.07 9.147e-06 116011000.0 2973.4 2917.1000000000004 3003.7 2984.2 4029.8 3278.7 3209.0 3037.2 3025.4 3587.1000000000004 3316.3 True False 3275.25737909861 3162.93425456334 3207.5491447154186 3168.5272563900653 3746.7607500552863 3251.9993542495217 3331.120251032177 2976.620663362691 2898.2529591119005 3360.609893821686 2908.4161237577687 1.1261309385353255 1.0875109062718045 1.102850832971989 1.0894339467133143 1.2882478265229629 1.1181341375758267 1.1453382560430385 1.0234507500655718 0.996505601601212 1.1554776726652403 1.0 11.506017983332477 -8.334774320730666 3.819840067012968 0.9988103733276494 1.1372252080005918 0.20950710473584488 0.07007391783298289 0.1186708712421503 3.3754728156402902 0.008612414789954233 0.010574332895913583 4.62621358158247e-09 8.334774320730666 0.13841483467294236 VQS(ph)PKPITGGLGAFTK ddPTM_A549_MK2206_60min_R1 2 VQSPKPITGGLGAFTK 16 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 VQS(0.978)PKPIT(0.022)GGLGAFTK;VQS(0.997)PKPIT(0.003)GGLGAFTK 114.02 5.4722e-08 14286200.0 5779.0 6006.799999999999 6717.9 5726.9 8292.8 5865.6 6499.799999999999 7118.0 9090.5 9763.7 9091.099999999999 True False 6754.353917015142 6312.5204628827905 7670.5992363052355 7129.990757090314 7072.940105405734 6486.293898729836 7680.729525226038 8126.998297960765 7031.516264545536 7558.073388815852 6833.528968404231 0.9884137388229177 0.9237570356501896 1.1224945810241407 1.043383409956527 1.0350347731177338 0.9491865665193073 1.1239770198881072 1.1892827754937556 1.0289729211739245 1.106027855265069 1.0 12.738415091638009 -5.734739819959014 24.999753100435303 1.037540930027779 0.9560853695284504 0.1872958770234645 0.0699508156214947 303.5163400484108 284188.47244306555 0.009596162786012634 0.0371458552323041 1.8418751138600547e-06 5.734739819959014 -0.08145556049932856 VQS(ph)PKPITGGLGAFTK ddPTM_A549_PD325901_60min_R1 2 VQSPKPITGGLGAFTK 16 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 VQS(0.935)PKPIT(0.065)GGLGAFTK;VQS(0.996)PKPIT(0.004)GGLGAFTK 122.3 2.0232000000000002e-08 32425000.0 11401.7 13213.6 12631.0 12350.8 14312.1 13926.099999999999 13274.3 13699.9 15285.8 13092.9 15368.0 True False 12559.192190512082 14327.156445133236 13488.215616373298 13113.680865298045 13306.867470064582 13812.690458783743 13779.460750475682 13426.644747136354 14643.390983801388 12266.2120595517 13477.833425778545 0.9318405854824253 1.0630162870042765 1.000770315989727 0.9729813725265369 0.9873150268063885 1.0248450194053245 1.0223795112440124 0.9962020098464577 1.0864795936558709 0.9101026605723275 1.0 13.718300980141802 -7.831909766703131 1.3203960071116172 1.0387396745554154 0.9958372305573114 0.0 0.05350163385877146 0.5754494593637405 2.0331966367766694 0.007331551806476526 0.01144405156626179 1.4726184363528765e-08 7.831909766703131 -0.042902443998103945 VQS(ph)PSQTR ddPTM_A549_MK2206_60min_R1 3 VQSPSQTR 8 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;J3KSK9 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 VQS(0.949)PS(0.05)QT(0.001)R;VQS(0.5)PS(0.5)QTR;VQS(0.966)PS(0.033)QT(0.001)R 103.26 0.0021541 81868100.0 4722.41 5952.91 5195.0599999999995 4579.09 4805.33 3678.6 3870.02 3774.0299999999997 5089.62 7106.01 7429.01 True False 5519.437356160491 6255.887692065585 5931.797625531771 5700.967255563163 4098.472322582158 4067.8670103429445 4573.15253964972 4309.01030998214 3936.829196453027 5500.757405661719 5584.181786754597 0.9884057444641797 1.120287256210792 1.062250093577129 1.0209136223117907 0.7339432130063408 0.7284624974050314 0.8189476478894386 0.7716457799068969 0.7049966041204088 0.9850605900239929 1.0 12.447130192287817 -6.646139738955799 6.126877131027874 0.8303938534628437 1.0594125445970515 0.5665807329821342 0.09570899042101706 0.15372160399534068 7.6968395636996645 0.017314822779857016 0.03630461324515353 2.25870888922465e-07 6.646139738955799 0.2290186911342078 VQS(ph)PSQTR ddPTM_A549_PD325901_60min_R1 3 VQSPSQTR 8 0 Q12830;E7ETD6;A0A2R8Y7Q1;Q12830-4;E9PE19;F5GXF5;Q12830-2;J3KSK9 Q12830 BPTF Nucleosome-remodeling factor subunit BPTF 1 VQS(0.973)PS(0.015)QT(0.012)R;VQS(0.838)PS(0.162)QTR;VQS(0.484)PS(0.484)QT(0.033)R 110.38 0.0015989 106747700.0 6623.52 6000.629999999999 6376.18 6170.95 6088.41 4980.5599999999995 4675.99 4848.96 4900.56 5291.52 5910.29 True False 7295.93487442229 6506.324149312812 6808.9059178851285 6552.1155662557 5660.781085474248 4939.999970659402 4853.937358249906 4752.243688864471 4694.606505356456 4957.412524143545 5183.361798415196 1.4075681301376666 1.2552324924148859 1.31360807574091 1.2640668008663796 1.0921061090516626 0.9530494228995935 0.936445794645087 0.9168265449495463 0.9057068921547834 0.95640873952871 1.0 12.33967238194681 -6.885255481761329 1.8692825325582654 0.9485200869264215 1.320553981007615 0.9474000813340783 0.04036161622188545 0.06146889055807561 0.4342142509719302 0.007100388143568229 0.015710727666817057 1.3024003919352079e-07 6.885255481761329 0.3720338940811935 VQSLEGEKLS(ph)PK ddPTM_A549_MK2206_60min_R1 4 VQSLEGEKLSPK 12 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK 157.37 6.688600000000001e-14 1838932000.0 24208.0 26547.5 25783.2 25314.800000000003 36426.3 28307.3 27569.899999999998 27428.7 41399.799999999996 37625.1 40244.0 True False 28293.718571223828 27898.654356459487 29439.645459072806 31516.927136424558 31068.039523627813 31302.759697135014 32578.993959434007 31316.802221870817 32022.811401895637 29125.563778233187 30250.304122104 0.9353201361883007 0.9222602934452433 0.9732016359320221 1.041871414224726 1.02703230348439 1.0347915700543977 1.076980708290745 1.0352557810811405 1.0585946928876149 0.9628188748340893 1.0 14.88466202617621 -6.049029849172461 2.9157066785246477 1.0335333258627288 0.9291253769399175 0.6574470781036654 0.028565220869689684 0.09921594597284976 1.6603887728665596 0.0035739323683395973 0.011855669130498367 8.932440887254147e-07 6.049029849172461 -0.10440794892281136 VQSLEGEKLS(ph)PK ddPTM_A549_PD325901_60min_R1 4 VQSLEGEKLSPK 12 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK 161.66 3.8914e-14 3125772000.0 34349.8 32730.1 33454.9 31563.7 38944.6 34255.899999999994 35470.3 37269.0 33435.9 33042.5 34478.6 True False 37836.96640901373 35488.38039329595 35725.35069465657 33513.31806263624 36209.26564757633 33976.93130790745 36820.14167659291 36525.64055803511 32030.705399474322 30956.190910931655 30237.950777853224 1.2513072293485625 1.1736370845370985 1.18147393509293 1.1083197505295876 1.1974774981807494 1.1236519153537585 1.21767979408051 1.2079403404805824 1.0592882313617014 1.0237529367765386 1.0 14.884072751158564 -8.89188764937588 3.706686482717366 1.0247700196179914 1.1794923515468059 0.7562760311298967 0.03940805289383021 0.08151460682152557 2.043150901461856 0.007390750987684092 0.007757490308771661 1.2826623604800859e-09 8.89188764937588 0.15472233192881446 VQSLEGEKLS(ph)PKS(ph)DISPLT(ph)PR ddPTM_A549_PD325901_60min_R1 1 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VQS(0.053)LEGEKLS(0.95)PKS(0.979)DIS(0.294)PLT(0.724)PR 41.733999999999995 0.036429 2741800.0 1006.1 995.57 1551.6 1411.5 1415.5 1135.0 1179.2 1495.5 1294.4 1365.8 1592.3 True False 1108.238531348326 1079.4701778532183 1656.9009065287619 1498.6851492509131 1316.0801632099012 1125.7569363080509 1224.075101282999 1465.6710793029456 1240.0008693972522 1279.563154911113 1396.4571944213426 0.7936072339170788 0.7730062777187553 1.1865031833040474 1.0732052190628953 0.9424421804459623 0.8061521261126352 0.8765575530514027 1.0495639144243756 0.8879619614198615 0.9162924291720467 1.0 10.447555636051138 -11.09180809012404 1.4101618232470468 1.0001413036304694 0.9311282160780755 0.0 0.1244670433936856 1.4131443037868725 5.004336788587992 0.09189519734073398 0.01992982724996751 8.094535086161873e-12 11.09180809012404 -0.06901308755239388 VQSLEGEKLS(ph)PKS(ph)DISPLTPR ddPTM_A549_PD325901_60min_R1 1 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VQS(0.012)LEGEKLS(0.974)PKS(0.897)DIS(0.103)PLT(0.014)PR 48.18 0.0046369 7192400.0 1487.2 1668.6 1409.9 1782.4 2095.3 1869.8 1915.4 2194.3 1858.9 1824.4 2264.5 True False 1638.179449181226 1809.2187779522096 1505.5842924174415 1892.4947998758973 1948.1333563925866 1854.5729687302146 1988.2915951470975 2150.5329651049515 1780.7768974988808 1709.2070726459476 1985.9808558482246 0.8248717223820113 0.9109950746123789 0.7581061458794361 0.9529270105011165 0.9809426665195757 0.9338322488199994 1.001163525465046 1.0828568456599978 0.8966737480147059 0.8606362279942195 1.0 10.955636000526386 -6.382581100914085 7.5299509846665975 0.9645558272558175 0.8396545836728555 0.45727696307441157 0.06410126116886311 0.179464398976231 10.318467535237993 0.00853166598978983 0.019899306378867384 4.143991911793617e-07 6.382581100914085 -0.12490124358296195 VQSLEGEKLS(ph)PKSDIS(ph)PLTPR ddPTM_A549_PD325901_60min_R1 2 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VQS(0.068)LEGEKLS(0.91)PKS(0.103)DIS(0.747)PLT(0.172)PR;VQS(0.058)LEGEKLS(0.935)PKS(0.122)DIS(0.497)PLT(0.387)PR 45.125 0.010531 9532700.0 2724.1 3676.7 3694.5 4291.6 3403.6 3698.8 3962.3 4526.3 3523.5 4242.5 4093.9 True False 3000.6486266235715 3986.54841237977 3945.230986833278 4556.682385069233 3164.5428777825637 3668.6781991332296 4113.087494753753 4436.0193956863395 3375.4195483013114 3974.6278259704222 3590.3762533703 0.8357476807080737 1.1103427972590842 1.09883497116211 1.2691378461496499 0.8813958912556852 1.0218088412570763 1.1455867587395003 1.2355305078464216 0.940129755240218 1.1070226476234695 1.0 11.809919323815738 VQSLEGEKLS(ph)PKSDISPLT(ph)PR ddPTM_A549_PD325901_60min_R1 1 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VQS(0.005)LEGEKLS(0.989)PKS(0.007)DIS(0.022)PLT(0.977)PR 56.048 0.0030761 8356400.0 2423.9 2653.6 2572.1 2634.0 2358.6 2338.4 2205.9 2066.0 2113.6 2885.5 2929.5 True False 2669.9725436191306 2877.2281848100097 2746.658173293782 2796.6961977519704 2192.9400727282746 2319.356845694048 2289.8467316147967 2024.7920092543543 2024.7727422419891 2703.309037557489 2569.1900716305486 1.0392273320302146 1.1198969732060202 1.0690755050094845 1.088551691302868 0.8535530698733064 0.9027579824882545 0.891271827997348 0.7881051821009531 0.7880976828456128 1.052202819638728 1.0 11.327097911084223 -6.756905068530769 24.9789838624409 0.8860568711746926 1.0813733946404016 0.5655436045159706 0.07663597911434714 66.21836163625078 364784.40127902955 0.012059400894000209 0.02445150571079728 1.750229225545426e-07 6.756905068530769 0.19531652346570905 VQSLEGEKLS(ph)PKSDISPLTPR ddPTM_A549_PD325901_60min_R1 2 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VQS(0.003)LEGEKLS(0.965)PKS(0.023)DIS(0.008)PLT(0.001)PR;VQS(0.001)LEGEKLS(0.733)PKS(0.225)DIS(0.035)PLT(0.006)PR 57.845 0.00088391 42445000.0 6289.4 6407.4 7664.2 7444.099999999999 8466.4 10602.6 8844.099999999999 9459.8 7796.299999999999 7307.7 7163.5 True False 6927.895257988435 6947.3740847722565 8184.338700578589 7903.905150222268 7871.749271494389 10516.255940880823 9180.667065177217 9271.116867930466 7468.648623363558 6846.290574860118 6282.43491316792 1.1027404746315217 1.1058409964917633 1.3027335441906924 1.2580958274085359 1.2529774490771535 1.6739140295490935 1.4613230685342449 1.475720321192393 1.1888143254312664 1.0897511346294033 1.0 12.617108104339641 -9.402785607773597 1.4216212316554027 1.0505396579854323 1.3279205740288946 0.30078462860869004 0.1614702714359944 0.31603455048338225 1.316330633622897 0.04136884281851228 0.03411535446860408 3.9556184349123205e-10 9.402785607773597 0.2773809160434624 VQSLPS(ph)VPLSCAAYR ddPTM_A549_MK2206_60min_R1 1 VQSLPSVPLSCAAYR 15 0 Q96AD5-2;Q96AD5 Q96AD5-2 PNPLA2 Patatin-like phospholipase domain-containing protein 2 1 VQS(0.328)LPS(0.669)VPLS(0.002)CAAYR 65.472 0.0037211999999999996 1708900.0 702.38 1006.3 1050.2 872.28 902.4 991.79 819.86 1049.2 1686.1 1435.8 1483.3 True False 820.924572457708 1057.5163717451796 1199.1341517390495 1085.9886391581374 769.658155402052 1096.7405595030807 968.8179495602665 1197.9273130402403 1304.2010421484217 1111.451782793592 1114.9556730026065 0.736284493039024 0.9484828835367587 1.0754993949757194 0.97401956459268 0.690303815692817 0.9836629258538395 0.8689295664564071 1.074416985398342 1.16973353625456 0.9968573726347537 1.0 10.122770639103157 -8.27109107642503 21.962283766223713 1.08196139592244 0.9039814050364887 0.320698941766011 0.11256655679045208 112.4177251875762 255804.24656745887 0.019240501743065568 0.02344872744716429 5.356843067243963e-09 8.27109107642503 -0.17797999088595118 VQT(ph)LNEQDWER ddPTM_A549_MK2206_60min_R1 2 VQTLNEQDWER 11 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VQT(1)LNEQDWER;VQT(1)LNEQDWER 96.464 0.00029867 9335600.0 2247.17 2891.9 2615.3 1900.7 3701.1 3011.1000000000004 2436.7 3338.1000000000004 4229.5 3225.5 3642.5 True False 2626.437357968316 3039.0853576963996 2986.188865971371 2366.371585325664 3156.6730928175234 3329.7326033935856 2879.4168488443133 3811.2858975025033 3271.5250031236283 2496.857309792961 2737.966722114199 0.9592656246531139 1.1099789245611003 1.0906592990529484 0.8642806233592214 1.1529260262082397 1.2161333359166753 1.0516624711278044 1.3920132289115297 1.1948739101538193 0.9119385161354122 1.0 11.41888919651262 VQT(ph)PEVDVK ddPTM_A549_MK2206_60min_R1 1 VQTPEVDVK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VQT(1)PEVDVK 87.363 0.0012178 8729700.0 3139.3 4093.1 3464.4 2842.7 4132.6 3097.6 2988.9 3326.7 4704.1 5105.8 5551.5 True False 3669.137091483927 4301.421306956375 3955.704013792381 3539.161627613652 3524.700014422117 3425.3859759795346 3531.9444410517394 3798.2699125914687 3638.628860904096 3952.396233867893 4172.909336394503 0.8792755355318006 1.030796732016447 0.9479487079415454 0.8481280905737519 0.8446624957031885 0.820862784174255 0.8463985570564605 0.9102210487691228 0.8719645138631172 0.9471560283844703 1.0 12.026837860582122 -10.738800157987061 0.9096166189235431 1.0024097434753396 0.8889456085579569 0.22476886480247782 0.05794044649869172 0.6090944686618643 0.8642184239732966 0.04679212555916769 0.011041772925591421 1.824735166962761e-11 10.738800157987061 -0.11346413491738272 VQT(ph)PLLR ddPTM_A549_MK2206_60min_R1 2 VQTPLLR 7 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 VQT(1)PLLR;VQT(1)PLLR 87.258 0.013706 13547000.0 2290.89 2761.6 2869.7 2271.05 3584.8999999999996 2551.74 2620.7 2992.1 4027.6000000000004 3284.23 3469.2 True False 2677.5362251169436 2902.1536442526967 3276.666611355504 2827.4573519513096 3057.5659588883145 2821.763433092076 3096.847267109735 3416.239337921945 3115.355030755582 2542.3201620032037 2607.7018949508793 1.0267800281547825 1.1129161848875229 1.2565341988284384 1.0842716943320585 1.1725136085564372 1.0820881936526832 1.1875771816962497 1.310057466513555 1.1946745280922018 0.9749274512265877 1.0 11.348563238871588 -10.746371951276371 1.0736245512925302 1.0027998977780446 1.1621335229481589 0.40802267592569785 0.07830851675214094 0.42979850815752607 0.9034593034365923 0.04933052304549201 0.013573716142771142 1.7931971862150652e-11 10.746371951276371 0.1593336251701143 VQT(ph)PLLR ddPTM_A549_PD325901_60min_R1 2 VQTPLLR 7 0 Q9UHD8;Q9UHD8-5;Q9UHD8-2;Q9UHD8-7;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 VQT(1)PLLR;VQT(1)PLLR 81.263 0.01642 29368000.0 2539.4 2820.2 3078.4 2600.3 3193.7 2481.1 2760.9 3188.0 2769.4 2517.8 2775.3 True False 2797.198018592525 3057.8681514927594 3287.3187359230114 2760.9146252902224 2969.3855296668744 2460.8947442060835 2865.967560322449 3124.412839062382 2653.0117488479214 2358.8256783095626 2433.955694076209 1.1492394974158238 1.2563368178537662 1.350607467475159 1.134332326594839 1.2199833944774758 1.0110680117125546 1.1774937264871648 1.2836769570894884 1.0900000173811109 0.9691325458596067 1.0 11.24908719120251 -9.33365894868539 0.24342760584206222 0.938988943029196 1.2600812990889507 0.46346996925383854 0.08650767334399327 1.5994589730475373 0.2805810926695615 0.185549113884232 0.10487085334913675 4.638110073910421e-10 9.33365894868539 0.3210923560597547 VQT(ph)TPKVEEEQDLK ddPTM_A549_PD325901_60min_R1 1 VQTTPKVEEEQDLK 14 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 VQT(0.544)T(0.456)PKVEEEQDLK 152.71 2.6097000000000004e-14 38675000.0 6073.6 6242.9 6126.5 5793.2 7112.7 4971.4 5727.7 6036.0 6372.2 6103.7 6064.7 True False 6690.187400851994 6769.011092459456 6542.281131637316 6151.032806688196 6613.128489482914 4930.9145666624145 5945.670757817701 5915.607244849601 6104.398593922414 5718.311340336044 5318.780347300828 1.2578423931808216 1.27266227414234 1.2300340876000624 1.156474305206027 1.2433543138962189 0.927076180005206 1.1178635644983923 1.1122112323836892 1.1477064656411824 1.0751170319033705 1.0 12.376879743051852 -2.0000000000000004 0.15123693029189703 1.0080928073293183 2.0290560401579585 0.5031824131336446 0.07392978857059035 38.82280742795012 0.36541403382303544 0.13496425089626793 8.789211362620621 0.00999999999999999 2.0000000000000004 1.0209632328286402 VQTT(ph)PKVEEEQDLK ddPTM_A549_MK2206_60min_R1 2 VQTTPKVEEEQDLK 14 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 VQT(0.097)T(0.903)PKVEEEQDLK;VQT(0.097)T(0.903)PKVEEEQDLK 205.65 2.3503999999999999e-32 84387000.0 21818.0 24548.0 22875.0 20267.1 28615.0 24908.0 24527.0 25018.0 29342.0 29985.0 30951.0 True False 25500.345001113732 25797.38834701448 26119.018968797132 25232.540409824705 24405.771406061285 27543.74802740774 28983.238417369615 28564.378114411687 22696.083849545703 23211.367674513058 23265.012495856306 1.096081293988368 1.1088491077152531 1.1226737562874358 1.0845702496106044 1.049033238662913 1.1839128834473445 1.2457864968923518 1.2277826250684045 0.9755457407808427 0.9976941847182415 1.0 14.505874341529848 -8.78101410850879 24.993248352809477 0.9884521324958652 1.1383631579329374 0.5741987780039058 0.05702811310672171 130.2116200997311 166255.0247081326 0.010899734598953041 0.011611681080463666 1.6557161749306045e-09 8.78101410850879 0.14991102543707224 VQTT(ph)PKVEEEQDLK ddPTM_A549_PD325901_60min_R1 3 VQTTPKVEEEQDLK 14 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 VQT(0.031)T(0.969)PKVEEEQDLK;VQT(0.381)T(0.619)PKVEEEQDLK;VQT(0.029)T(0.971)PKVEEEQDLK 158.92 1.7623000000000001e-19 103217000.0 21362.7 22698.0 23201.1 21519.1 27860.6 22439.0 24058.1 22715.300000000003 24437.5 23533.0 26115.9 True False 23531.425577611455 24610.84011863792 24775.666165548122 22848.285933577994 25903.767569852167 22256.26422362673 24973.64416059747 22262.225521691893 23410.476858695423 22047.1223638331 22903.809862330163 1.0274022408958927 1.0745304063633232 1.0817268530637165 0.9975757776070483 1.1309807287763083 0.9717276015389715 1.0903707422786266 0.9719878769298779 1.0221215160015178 0.9625962884058842 1.0 14.483299978409589 -7.903473631367952 1.1012629442421664 1.0083899529049716 1.0573673623552662 0.23110819885239187 0.047164885823671884 0.542413816872652 1.3220873669194229 0.007293774530078092 0.011348205341012692 1.2488962702982277e-08 7.903473631367952 0.04897740945029461 VQTT(ph)PPPAVQGQK ddPTM_A549_MK2206_60min_R1 2 VQTTPPPAVQGQK 13 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 VQT(0.014)T(0.986)PPPAVQGQK;VQT(0.089)T(0.911)PPPAVQGQK 159.66 1.6878e-18 107600000.0 20059.8 23153.6 21275.5 20333.9 28733.0 21373.8 23141.8 22798.3 37864.0 34899.0 41057.0 True False 23445.40382497668 24332.01934297843 24292.685817295875 25315.706412823467 24506.413762374956 23635.56132921982 27346.365507688835 26030.028841865547 29287.864456383282 27015.291661591855 30861.413784445504 0.7596996038073093 0.788428537750336 0.7871540165648425 0.8203028736675332 0.7940794266115722 0.765861262685652 0.8861021630017387 0.8434490079966774 0.9490124030268727 0.875374402815203 1.0 14.91351653391074 -8.567999904354519 0.7679325329237591 0.9895951483715344 0.7836367491277734 0.6519812753165029 0.04381807317132694 0.10785642193913877 0.1295152161903248 0.006412037970975419 0.007317765632144052 2.7039589596066874e-09 8.567999904354519 -0.20595839924376103 VQTT(ph)PPPAVQGQK ddPTM_A549_PD325901_60min_R1 2 VQTTPPPAVQGQK 13 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 VQT(0.028)T(0.972)PPPAVQGQK;VQT(0.008)T(0.992)PPPAVQGQK 225.36 4.3898e-46 170812000.0 47510.0 48779.0 51285.0 50320.0 63330.0 57630.0 56502.0 57488.0 60193.0 58174.0 63605.0 True False 52333.18022498655 52889.777519915384 54765.508501757904 53428.152114988305 58881.91927663936 57160.68038716564 58652.21452908077 56341.35674153647 57663.29753679603 54500.88371196304 55781.988225315225 0.938173447916589 0.9481515306747835 0.981777635471659 0.9578029363023189 1.055572258177727 1.024715722865266 1.051454356416485 1.0100277622583447 1.0337261071420007 0.9770337244313069 1.0 15.767511736498731 -6.740556038933878 24.863413055897237 1.0215111149665654 0.9576889510066051 0.6500894170264292 0.023043762515793122 101.53052136034977 120880.19817668827 0.0029987450870641243 0.00623685241498668 1.8173725373653615e-07 6.740556038933878 -0.06382216395996032 VQTT(ph)PSKPGGDR ddPTM_A549_MK2206_60min_R1 4 VQTTPSKPGGDR 12 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 VQT(0.046)T(0.908)PS(0.046)KPGGDR;VQT(0.107)T(0.884)PS(0.01)KPGGDR;VQT(0.31)T(0.672)PS(0.018)KPGGDR;VQT(0.005)T(0.991)PS(0.005)KPGGDR 147.66 2.1717e-11 1266553000.0 12341.0 14674.899999999998 13314.8 12798.7 16346.0 13804.199999999999 12666.1 12797.000000000002 19779.5 20470.4 18996.1 True False 14423.859091518221 15421.789728434214 15203.038853147109 15934.382074555473 13941.525053415266 15264.951281513639 14967.366417345998 14611.01393916886 15299.474831371046 15846.122422689768 14278.8441043112 1.01015593322174 1.080044688195589 1.0647247593771871 1.1159434165784063 0.976376305502622 1.0690607145787596 1.0482197514031906 1.0232630759486596 1.0714785258249082 1.1097622683551367 1.0 13.801591575129777 -10.925418334250264 1.0614914072018602 0.9985426367033866 1.053309523309687 0.0 0.04827107858431809 0.6356757188678873 1.2147013842830703 0.027098046495313294 0.00572240215121155 1.1873579536180563e-11 10.925418334250264 0.05476688660630036 VQTT(ph)PSKPGGDR ddPTM_A549_PD325901_60min_R1 4 VQTTPSKPGGDR 12 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 VQT(0.182)T(0.815)PS(0.003)KPGGDR;VQT(0.011)T(0.988)PS(0.001)KPGGDR;VQT(0.068)T(0.925)PS(0.007)KPGGDR;VQT(0.036)T(0.905)PS(0.059)KPGGDR 159.12 2.5661e-13 2135655000.0 23455.399999999998 22547.2 21955.0 24716.0 28192.5 24072.800000000003 25466.1 26292.1 24449.1 25422.9 26699.8 True False 25836.574941047133 24447.331673405286 23444.998326140096 26242.651185891293 26212.356058845035 23876.759098111397 26435.22637108463 25767.683439746565 23421.58935103551 23817.693755300737 23415.893863977235 1.1033776925677754 1.0440486199424914 1.0012429362010236 1.1207195991891095 1.1194258144110334 1.0196817271555518 1.1289437219286471 1.1004356096517545 1.0002432316738092 1.0171592805150875 1.0 14.515200491193653 -8.771764733793876 24.70122203207141 1.0001148488443565 1.0782563188975853 0.39603793490329964 0.04046663051429648 118.85828258266237 284342.556345752 0.006886096304084928 0.007371628748549221 1.6913569261649301e-09 8.771764733793876 0.0781414700532288 VQVEYK ddPTM_A549_PD325901_60min_R1 1 VQVEYK 6 0 P11142;E9PKE3;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 119.89 0.048362999999999996 12659000.0 8699.6 9033.1 8591.7 7784.5 10088.0 8070.0 8092.8 8432.3 9147.8 8478.2 9960.4 False True 9582.77698769297 9794.351038667206 9174.784428089182 8265.330885117768 9379.453681710687 8004.280595599974 8400.775932550088 8264.111161488618 8763.349778331416 7942.885005101341 8735.333944177812 1.0970132394400318 1.1212337274404076 1.0503072334406023 0.9461951813103487 1.0737372768630313 0.9163107726333586 0.9617006042624495 0.9460555502857142 1.003207185247025 0.9092823532402393 1.0 13.092647141828179 -5.990695598498788 4.202984603466384 0.9908595407452513 1.107076358953957 0.5492372623164279 0.0472736007876348 0.10347259958816159 4.359227970068244 0.005403536801818694 0.017103218850963234 1.0216553216074917e-06 5.990695598498788 0.11621681820870566 VQVEYKGETK ddPTM_A549_MK2206_60min_R1 1 VQVEYKGETK 10 1 P11142;E9PKE3;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 63.623999999999995 0.006519 8593900.0 2802.3 2741.4 3087.5 2941.2 4050.8 3088.1 2970.0 2698.9 4628.7 4015.0 4174.8 False True 3275.2597303428815 2880.9255505338747 3525.3539263895595 3661.7941320354853 3454.932686062314 3414.8806922851213 3509.610555697302 3081.477340034605 3580.306840515034 3108.0087114613984 3138.0819413815702 1.0437138964258268 0.9180530031875204 1.1234104119147026 1.1668892656204337 1.1009695573918785 1.0882063489972758 1.1183935350496816 0.9819620384667059 1.1409220368983641 0.9904166843052761 1.0 11.61566730901443 -5.768002968839195 24.99997818393278 1.0788751812838646 0.9808834449724837 0.2509009658457564 0.06540108474302063 148.3770647591116 565162.1316771517 0.009424685436893402 0.030334637427891855 1.7060707262554615e-06 5.768002968839195 -0.09799173631138092 VQVEYKGETK ddPTM_A549_PD325901_60min_R1 2 VQVEYKGETK 10 1 P11142;E9PKE3;P11142-2;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PPY6;E9PN25;P54652 P11142;P54652 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 94.191 0.00058962 46120000.0 12762.8 13083.8 13776.5 14208.0 16169.9 16519.9 16502.1 17428.4 16856.4 15817.099999999999 16427.0 False True 14058.470060523225 14186.4177436001 14711.456134824379 15085.595891290805 15034.182007126661 16385.36741155538 17130.096445795618 17080.776889684705 16147.98412771 14818.405606636834 14406.58313933265 0.9758365272707161 0.9847177228907624 1.0211620612981693 1.0471321162964953 1.0435633391848862 1.1373527819251104 1.189046443568376 1.1856230394458356 1.1208753645146434 1.0285857141364654 1.0 13.814440586507905 -6.259594851250854 1.3637878445670197 1.0838385712777745 0.9782581090538299 0.38948417805183044 0.0581423330459221 0.552462231541565 1.8691578564251163 0.011173836506756308 0.047496193449703294 5.500537739546596e-07 6.259594851250854 -0.10558046222394457 VQVSYKGETK ddPTM_A549_MK2206_60min_R1 1 VQVSYKGETK 10 1 A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 45.879 0.041743 3363200.0 1918.5 2435.9 2352.8 2049.6 3056.5 2381.4 2363.7 2418.3 3497.8 2740.0 3708.1 False True 2242.2958971783255 2559.8769054298773 2686.462418788453 2551.7520920100415 2606.8928989210663 2633.398167354615 2793.1536937716214 2761.101430733144 2705.5538848388287 2121.032096987354 2787.276431646304 0.804475606265545 0.918415151208338 0.9638306370644747 0.9155001861451 0.935283228216193 0.9447926073838321 1.002108603961411 0.9906091119574746 0.9706801428521369 0.7609694083103796 1.0 11.44464037529489 -3.1268357492597008 0.39888250298360894 0.9873005708965327 3.786644570350676e-18 0.054488330538390195 0.07267238612989937 8.670774070308468 0.23914482950827015 0.005931101958201627 5.9233978827797875 0.0007467311196967916 3.1268357492597008 -0.9873005708965327 VQVSYKGETK ddPTM_A549_PD325901_60min_R1 2 VQVSYKGETK 10 1 A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 60.434 0.0080973 11185700.0 6666.3 6340.1 6724.8 7208.099999999999 7996.5 9077.5 8249.400000000001 9192.7 8056.3 7977.9 8702.2 False True 7343.057868529319 6874.402477582883 7181.18536750749 7653.327966217151 7434.85342642739 9003.57584963553 8563.33543124489 9009.344386966364 7717.721727537915 7474.174032483072 7631.884567790869 0.9621552584167092 0.9007477008490384 0.9409452283665973 1.002809712101357 0.9741831601862773 1.1797316599406733 1.122047294502469 1.1804875069768272 1.0112471774153016 0.9793353091353885 1.0 12.897823635416534 -6.510496581002235 1.9069351033707447 1.0399720873526244 0.9301983629016878 0.35854444115788286 0.07241380949540135 0.38125530508068733 2.730471720414929 0.012001764297041239 0.033083501057291714 3.086763946240124e-07 6.510496581002235 -0.10977372445093658 VRAS(ph)LSDLSSLDDVEGMSVR ddPTM_A549_MK2206_60min_R1 2 VRASLSDLSSLDDVEGMSVR 20 1 A0A087WTM5;H7BYJ1;Q969K3;Q969K3-2 A0A087WTM5 RNF34 E3 ubiquitin-protein ligase RNF34 1 VRAS(0.877)LS(0.121)DLS(0.002)SLDDVEGMSVR;VRAS(0.993)LS(0.007)DLSSLDDVEGMSVR 134.53 1.2423e-17 31115000.0 5125.3 5532.7 5084.200000000001 4696.7 5941.2 6149.2 4743.8 5195.5 6511.200000000001 6910.799999999999 7437.7 True False 5990.325338445697 5814.290797927613 5805.216010542444 5847.391710842877 5067.257350260052 6799.904262491397 5605.6870552581995 5931.978035551439 5036.423596249813 5349.645480240954 5590.7138199227975 1.0714777274234397 1.0399907749182382 1.0383675855228462 1.0459114701964165 0.9063703694155509 1.2162855194375335 1.002678233194846 1.0610412599572756 0.9008551963976867 0.9568805795741532 1.0 12.448816782169933 -8.746505813024632 24.995623334144174 0.953181619113773 1.0465324362916015 0.2598466560560584 0.07152306155456664 236.9604674664989 396621.38255160226 0.012092978924238353 0.013685170155047036 1.7926445576864693e-09 8.746505813024632 0.09335081717782856 VRAS(ph)LSDLSSLDDVEGMSVR ddPTM_A549_PD325901_60min_R1 4 VRASLSDLSSLDDVEGMSVR 20 1 A0A087WTM5;H7BYJ1;Q969K3;Q969K3-2 A0A087WTM5 RNF34 E3 ubiquitin-protein ligase RNF34 1 VRAS(0.974)LS(0.026)DLSSLDDVEGMSVR;VRAS(0.953)LS(0.047)DLSSLDDVEGMSVR;VRAS(0.897)LS(0.101)DLS(0.002)SLDDVEGMSVR;VRAS(0.738)LS(0.249)DLS(0.011)S(0.001)LDDVEGMSVR 124.62 1.927e-15 24080100.0 4016.0199999999995 3625.23 3788.27 4051.3399999999997 4236.75 4072.5699999999997 3892.72 4623.93 5377.79 4626.59 4566.76 True False 4423.723393962333 3930.7408548457897 4045.3647829180936 4301.582070539284 3939.17529599403 4039.4043401762783 4040.8595897781206 4531.702088747091 5151.780188068482 4334.466317821214 4005.077471076809 1.1045287952377525 0.9814394061618406 1.0100590593146386 1.0740321758077644 0.9835453432402493 1.0085708377296982 1.0089341889038892 1.1314892462064392 1.28631224371382 1.082242815307102 1.0 11.967614433927121 -8.275936442629774 10.626785377835763 1.138718625721273 1.021955636362997 0.30294890376953987 0.07224051111505025 0.5812985742665728 418.94026986899814 0.017231117884917945 0.021100317280156922 5.2974096382438255e-09 8.275936442629774 -0.116762989358276 VRDLT(ph)IQK ddPTM_A549_MK2206_60min_R1 4 VRDLTIQK 8 1 P14868;C9JQM9;C9J7S3;H7C278;C9JLC1 P14868 DARS Aspartate--tRNA ligase, cytoplasmic 1 VRDLT(1)IQK;VRDLT(1)IQK;VRDLT(1)IQK;VRDLT(1)IQK 90.82700000000001 0.0010397 17241900.0 5057.87 5497.36 5348.83 4707.9 8342.199999999999 6417.459999999999 5361.75 6561.69 9700.3 7660.219999999999 7062.09 True False 5911.514802950916 5777.1521428769565 6107.374523753929 5861.335711345662 7115.07343084552 7096.551357634816 6335.910571383839 7491.8296518328425 7503.197538196041 5929.770981746154 5308.378149231427 1.11361976045486 1.0883083270383442 1.150516099656198 1.1041669501624134 1.3403478860818676 1.336858670978873 1.1935680528526744 1.4113217712113342 1.4134632701859022 1.1170588859809647 1.0 12.37405543129122 -6.7245879125295716 24.931298840894655 1.2351995767541653 1.1149040030123807 0.23906446961778105 0.11957860491108221 314.8993474222801 213038.8780707917 0.023903436588354154 0.04975793805691856 1.8854372691830247e-07 6.7245879125295716 -0.12029557374178457 VRDLT(ph)IQK ddPTM_A549_PD325901_60min_R1 2 VRDLTIQK 8 1 P14868;C9JQM9;C9J7S3;H7C278;C9JLC1 P14868 DARS Aspartate--tRNA ligase, cytoplasmic 1 VRDLT(1)IQK;VRDLT(1)IQK 88.681 0.0010609999999999999 28576000.0 2666.5 2036.92 2523.7 2126.8 2366.9 2187.2 2257.84 2229.8 2407.8999999999996 2095.88 2527.6 True False 2937.201117026452 2208.5783969713602 2694.9734582409387 2258.1676056867464 2200.6571093617194 2169.3881683638483 2343.7633367374556 2185.3248897557396 2306.704336697808 1963.5457791148822 2216.7212237765402 1.3250205237907446 0.9963266347081265 1.2157475776992919 1.018697155720644 0.9927532094507342 0.9786472674574512 1.0573108208638335 0.9858365888845003 1.0405928864469332 0.8857883246904935 1.0 11.114211632059993 -2.0000000001533285 0.777361076573854 1.0175476669923618 59.93680966562671 0.5647705451688112 0.0767308540857219 195.76386245899997 0.7044359771126993 0.009252320185217464 20282.021866214447 0.009999999996469482 2.0000000001533285 58.91926199863435 VRDLT(ph)IQKADEVVWVR ddPTM_A549_PD325901_60min_R1 1 VRDLTIQKADEVVWVR 16 2 P14868;C9JQM9;C9J7S3;H7C278;C9JLC1 P14868 DARS Aspartate--tRNA ligase, cytoplasmic 1 VRDLT(1)IQKADEVVWVR 56.327 0.0036771 2272800.0 483.34 588.32 470.29 323.07 642.66 479.76 490.87 404.01 323.39 599.67 675.23 True False 532.4083209838982 637.8997911092198 502.20670748350824 343.0253001547947 597.5217786566408 475.8529936239208 509.55032646437047 395.95170361028636 309.7990429190182 561.8067338596774 592.1809906356356 0.8990635116679808 1.0772041000919508 0.8480628649434514 0.5792575337256234 1.009018844078856 0.8035600621241649 0.8604638354186768 0.6686329177592808 0.5231492530459073 0.9487078152519637 1.0 9.209894369658869 -8.114502205216294 9.792911114995315 0.7605748063732922 0.8677744146644113 0.046617376866011195 0.16789836461958915 0.98327554706204 78.4198648134432 0.0332579586641306 0.04295802228236478 7.682415547706304e-09 8.114502205216294 0.10719960829111908 VRDS(ph)TGAR ddPTM_A549_PD325901_60min_R1 1 VRDSTGAR 8 1 Q00341;A0A024R4E5;Q00341-2;H0Y394;H7C2D1 Q00341 HDLBP Vigilin 1 VRDS(0.997)T(0.003)GAR 82.417 0.00098715 8348400.0 1240.0 1099.5 760.24 903.67 1166.2 728.63 666.62 815.71 754.17 1129.3 1161.9 True False 1365.8838871602477 1192.1587236955863 811.8344580945 959.4876435165238 1084.2901351715914 722.6962788565062 691.9885888884611 799.4400241378844 722.4748575968209 1057.9958052724558 1018.9936658909487 1.3404243155584272 1.1699373250306047 0.7967021633885027 0.9416031479230086 1.0640793671897373 0.7092254869166656 0.6790901769575051 0.7845387571068958 0.7090081928675493 1.0382751538964727 1.0 9.992929368338416 -5.620517858967841 3.4890529911948445 0.8475872545401898 1.3143325680803783 0.5828147804942487 0.13211382267961927 0.1255763289360795 2.858956885437128 0.019922048419208877 0.09781120470512046 2.3959742209634857e-06 5.620517858967841 0.46674531354018856 VREDDEDS(ph)DDDGSDEEIDESLAAQFLNSGNVR ddPTM_A549_PD325901_60min_R1 1 VREDDEDSDDDGSDEEIDESLAAQFLNSGNVR 32 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 VREDDEDS(0.991)DDDGS(0.009)DEEIDESLAAQFLNSGNVR 120.47 8.8933e-22 5066600.0 1718.9 1075.2 864.97 1049.1 1163.2 978.42 1133.7 1227.0 1303.3 1215.8 1352.8 True False 1893.401462612701 1165.8108774147283 923.6720656871506 1113.90052432103 1081.5008448221529 970.4520719141175 1176.843573884444 1202.5265224371215 1248.5268333478361 1139.0341805102737 1186.4141761057529 1.5959025951860588 0.9826339746220396 0.7785409887118693 0.9388799853835704 0.9115710740847989 0.8179707318564733 0.9919331693652522 1.0135807095497251 1.0523532662480146 0.9600645402341721 1.0 10.212392025998895 -5.261592883403802 9.53084397144645 0.979627369782807 1.597880237399614 0.8230562210371144 0.08541488410212125 0.026732739295901965 63.278946733605444 0.013337443813105674 0.10684638623285504 5.475289873514147e-06 5.261592883403802 0.618252867616807 VREEEIEVDS(ph)R ddPTM_A549_MK2206_60min_R1 2 VREEEIEVDSR 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VREEEIEVDS(1)R;VREEEIEVDS(1)R 109.84 2.6373000000000003e-05 12543700.0 630.59 675.99 636.1 692.24 1203.72 666.91 578.6600000000001 1025.93 1225.02 487.63 515.16 True False 737.0181755546935 710.3950036132613 726.3085449640153 861.838831075834 1026.6543825582417 737.4819735409704 683.7950317036364 1171.3587192788552 947.554925954961 377.4740443262567 387.23155430730316 1.9033009251353599 1.8345483360312596 1.8756440090820283 2.225642051866174 2.6512673648064817 1.9044986529060388 1.7658556594821901 3.0249567894182414 2.4469982247443367 0.974801872748978 1.0 8.597052707955001 -10.774811059051572 1.045304121110759 1.0059645209901105 2.1913551009400583 0.5940469102701813 0.3783356633348069 0.30998795543522706 0.6063279555236446 0.2658408741349227 0.06866215895062706 1.679534545091826e-11 10.774811059051572 1.1853905799499478 VREEEIEVDS(ph)R ddPTM_A549_PD325901_60min_R1 1 VREEEIEVDSR 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VREEEIEVDS(1)R 83.499 0.00016787 6648700.0 705.03 501.11 337.46 552.36 573.76 545.89 414.77 620.33 501.7 0.0 0.0 True False 776.6041265843459 543.3402983456978 360.36206491183043 586.4780226994227 533.4610769645445 541.4444528292529 430.55429932085275 607.9570315105292 480.61529370874644 0.0 0.0 0.0 VREEEIEVDS(ph)RVADNSFDAK ddPTM_A549_MK2206_60min_R1 2 VREEEIEVDSRVADNSFDAK 20 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VREEEIEVDS(0.981)RVADNS(0.019)FDAK;VREEEIEVDS(0.993)RVADNS(0.007)FDAK 100.88 3.8383999999999994e-10 7025000.0 1026.58 981.15 1202.2 1310.4699999999998 1439.18 1126.82 880.9300000000001 1071.39 2155.6000000000004 1938.73 2020.38 True False 1199.8416065287079 1031.0863441695162 1372.6900373459193 1631.5352088292332 1227.4785284702184 1246.0593444774206 1040.983578057382 1223.2628134942659 1667.3600417858609 1500.769546493538 1518.6638863486867 0.7900639616929845 0.6789430850617975 0.9038800814881223 1.0743227803697382 0.80826214378577 0.8204971196578017 0.6854601517918568 0.8054862069811566 1.0979124852930318 0.9882170505165748 1.0 10.568586889752561 -8.755998646833028 24.9931886736999 1.046236455290847 0.8224037122921315 0.43920516158965506 0.10407440056428001 86.14157654193293 395709.7041188818 0.018877253132899764 0.021105753382821866 1.7538859665597445e-09 8.755998646833028 -0.22383274299871547 VREEFK ddPTM_A549_PD325901_60min_R1 2 VREEFK 6 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 0 ; 102.77 0.031338 20445500.0 6929.6 6590.5 6821.200000000001 7281.2 7768.6 7607.599999999999 7358.9 8181.299999999999 8216.1 8078.6 8021.799999999999 False True 7633.087890698103 7145.904564361763 7284.127651207783 7730.943187195011 7222.960336215074 7545.646227891739 7638.946966444588 8018.117553394314 7870.805889257386 7568.5158172975 7035.169454379906 1.0849899124954197 1.0157402192939242 1.0353876617247482 1.0988993566291336 1.0266931568674944 1.0725606933595642 1.0858227390228372 1.1397191788184222 1.1187798588642717 1.0758114451081981 1.0 12.780369458379655 VREEYPDR ddPTM_A549_MK2206_60min_R1 2 VREEYPDR 8 1 A0A0B4J269;Q13509;Q13509-2;G3V2A3 A0A0B4J269 TUBB3 Tubulin beta-3 chain 0 ; 70.1 0.0068283 7092900.0 1549.9499999999998 1501.08 1410.5700000000002 1137.68 1614.27 1122.95 1422.4 1305.56 1774.65 1930.9099999999999 1717.21 False True 1811.543667360722 1577.4785603689302 1610.610036582127 1416.4116510723964 1376.8130214105374 1241.7798236461178 1680.8316681561757 1490.627128109814 1372.6946085337154 1494.7160899247642 1290.7793644150238 1.4034495106618834 1.2221132471263494 1.2477810545972348 1.0973305664165995 1.0666524886958537 0.9620387944525962 1.3021835601763916 1.1548272068831535 1.0634618482267224 1.1579950308565428 1.0 10.33402670353537 -2.0000000000000004 0.29808249635010653 1.0318189162655096 3.9184709369856994 0.4069650509280438 0.09774457763712908 26.340003675427088 0.32928841681319293 0.031191583177282656 41.14569274545983 0.00999999999999999 2.0000000000000004 2.88665202072019 VREEYPDR ddPTM_A549_PD325901_60min_R1 1 VREEYPDR 8 1 A0A0B4J269;Q13509;Q13509-2;G3V2A3 A0A0B4J269 TUBB3 Tubulin beta-3 chain 0 61.161 0.011081 4797100.0 1306.6 1243.2 1278.0 1051.2 1134.6 1415.8 1422.1 909.79 1169.7 1231.3 1728.5 False True 1439.2450701319183 1347.968827010779 1364.7327652383087 1116.1302365515842 1054.9096101575092 1404.2701942069937 1476.2187937029794 891.6435247335518 1120.5415767413206 1153.5555078650273 1515.9054578642783 0.9494293081836614 0.8892169495252685 0.9002756459238869 0.7362795817913819 0.6958940642932608 0.9263573707198305 0.9738198289639959 0.5881920406763138 0.739189618276079 0.7609679758592881 1.0 10.565964064738674 -10.930962661459436 1.2441780973868848 0.9979680513937456 0.8137271754186528 0.0 0.13444919156441357 0.522938153635775 1.463688105532794 0.07961237524681407 0.01962396275498104 1.1722961495727195e-11 10.930962661459436 -0.18424087597509275 VRGEGPGEAGGPLT(ph)PR ddPTM_A549_MK2206_60min_R1 2 VRGEGPGEAGGPLTPR 16 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 VRGEGPGEAGGPLT(1)PR;VRGEGPGEAGGPLT(1)PR 142.85 1.15e-14 83204000.0 3855.2 4034.4 3982.0 3943.2000000000003 5057.3 4288.8 3671.3999999999996 3179.9 4886.5 5322.4 5671.0 True False 4505.863509409372 4239.733727684346 4546.707476885252 4909.284177016973 4313.3778693648 4742.63796932497 4338.445856628644 3630.660563035326 3779.715552137039 4120.066143432662 4262.734188362289 1.0570360032560444 0.9946042939433717 1.0666176392837816 1.1516749485388587 1.0118805627479126 1.1125812119068714 1.0177612923820245 0.851721079148545 0.8866880704070308 0.9665313297462633 1.0 12.057563380525092 -8.010511611216511 22.572915788490207 0.9377388183508397 1.0640960220251818 0.5882790245148742 0.054224560574663495 91.86646074515716 197278.01481110536 0.009844271879835179 0.013146027553479937 9.760866856092308e-09 8.010511611216511 0.1263572036743421 VRGEGPGEAGGPLT(ph)PR ddPTM_A549_PD325901_60min_R1 2 VRGEGPGEAGGPLTPR 16 1 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 VRGEGPGEAGGPLT(1)PR;VRGEGPGEAGGPLT(1)PR 178.07 6.1928e-29 41680000.0 3301.0 3630.7 3573.7 3915.8 4285.9 3776.7999999999997 3479.9 4381.9 5027.1 6795.3 7651.4 True False 3636.1150899322374 3936.6718309427574 3816.232772403867 4157.670072572957 3984.873169552322 3746.042992994051 3612.3294987743475 4294.499566965951 4815.828469211159 6366.24359830685 6710.326306220843 0.5418685953559901 0.5866587780229473 0.5687104617946832 0.6195928309355936 0.5938419366965991 0.5582504966295397 0.5383239702405408 0.6399837162888357 0.7176742604523747 0.9487234014842155 1.0 12.712167207409527 -9.834414596849491 0.5104583260088997 1.0134381495365736 0.5638472201685314 0.9538526369591722 0.033106655858683776 0.1371658075090412 0.07323943004591069 0.026862203655858993 0.01034278850075045 1.464149431331313e-10 9.834414596849491 -0.44959092936804224 down VRGEVAPDAK ddPTM_A549_MK2206_60min_R1 2 VRGEVAPDAK 10 1 P09382;F8WEI7 P09382 LGALS1 Galectin-1 0 ; 78.692 0.0013272 12533900.0 3810.7 4098.6 3997.3 3663.0 5200.5 3808.3 3616.8999999999996 3486.2 5950.799999999999 5410.200000000001 5971.700000000001 False True 4453.852997329915 4307.201233463975 4564.177246949628 4560.43516443832 4435.5133390606925 4211.291778255055 4274.043912088069 3980.379526039731 4602.953301474903 4188.032062452912 4488.762079464478 0.9922230045797552 0.9595521342440667 1.016800883216815 1.0159672274237337 0.9881373217245369 0.9381855629018934 0.9521653935817366 0.8867432614104157 1.0254393572189615 0.9330037966620311 1.0 12.132101914915719 VRGEVAPDAK ddPTM_A549_PD325901_60min_R1 2 VRGEVAPDAK 10 1 P09382;F8WEI7 P09382 LGALS1 Galectin-1 0 ; 97.45200000000001 0.00052065 21608000.0 8861.900000000001 8565.5 9668.900000000001 9387.0 9834.2 10031.6 9707.9 10254.1 10803.6 10539.2 11826.9 False True 9761.553564214028 9287.344745624869 10325.089697818994 9966.813670576214 9143.479718148219 9949.90597556638 10077.33944686671 10049.573931314164 10349.562262531022 9873.753113368874 10372.26627689616 0.9411206098668646 0.8954016892443347 0.9954516613999537 0.9609099308197402 0.8815315259033585 0.9592798439555518 0.971565825427526 0.9688889258174194 0.9978110845056388 0.951937874499259 1.0 13.34044352820641 -8.187265421882877 1.1821195515908796 0.9993246192682101 0.9375467655409636 0.22258010261081362 0.032704366531514414 0.2917396096952515 0.7993217299986565 0.00541288524065567 0.007328747342137647 6.497324807668995e-09 8.187265421882877 -0.061777853727246534 VRGEVAPDAKS(ph)FVLNLGK ddPTM_A549_MK2206_60min_R1 1 VRGEVAPDAKSFVLNLGK 18 2 P09382 P09382 LGALS1 Galectin-1 1 VRGEVAPDAKS(1)FVLNLGK 42.309 0.015815 1165900.0 290.02 459.41 97.984 361.5 469.73 214.48 238.95 300.75 400.26 460.1 383.26 True False 338.9682856917685 482.79200670123555 111.87960457436577 450.06751622835145 400.6333392475686 237.17613123969852 282.36412198110105 343.38223350824654 309.6017490838785 356.1630904466722 288.0859645621108 1.1766220065840367 1.675860909902629 0.3883549299058085 1.5622681129656968 1.390672884243178 0.8232824934744913 0.980138419482855 1.1919436409551774 1.0746852924767494 1.2363083740925673 1.0 8.17035556443464 -7.252423414976467 24.857688938091226 1.0313023109643424 1.2337677924088417 0.07452415141673918 0.3250946184568003 1189.3055800527827 3279002.10103128 0.04360474307331961 0.07481386629831803 5.5921213231955804e-08 7.252423414976467 0.20246548144449927 VRGEVAPDAKS(ph)FVLNLGK ddPTM_A549_PD325901_60min_R1 2 VRGEVAPDAKSFVLNLGK 18 2 P09382 P09382 LGALS1 Galectin-1 1 VRGEVAPDAKS(1)FVLNLGK;VRGEVAPDAKS(1)FVLNLGK 82.975 3.4833000000000003e-05 4027500.0 1359.23 1230.27 1580.87 1353.52 1543.79 1420.52 1463.27 1552.58 1606.33 1517.03 1612.4299999999998 True False 1497.2180289877606 1333.9491705329401 1688.1573447435715 1437.1238563330476 1435.3595161863736 1408.9517560919055 1518.9555405820688 1521.6125739245513 1538.821536263046 1421.2444669020406 1414.1113320359257 1.0587695572965845 0.9433126942080476 1.1937938028635242 1.0162734883568116 1.015025821283715 0.9963513651102761 1.0741414103479368 1.0760203524667706 1.088189806136107 1.0050442526726981 1.0 10.465679991692904 VRGGAPDPSPGATATPGAPAQPS(ph)SPDAR ddPTM_A549_MK2206_60min_R1 3 VRGGAPDPSPGATATPGAPAQPSSPDAR 28 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 VRGGAPDPSPGATATPGAPAQPS(0.584)S(0.416)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.555)S(0.444)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR 134.21 8.064e-28 22109800.0 2322.1400000000003 2315.52 2201.98 2098.88 2716.6000000000004 2444.59 2054.04 2208.2799999999997 3135.4800000000005 2876.3 3902.1299999999997 True False 2714.0604611277963 2433.37007761443 2514.2538749251107 2613.1056942223045 2316.9917386582597 2703.274891212488 2427.232480075583 2521.310452573868 2425.2987863326834 2226.541832322893 2933.1234276907285 0.9253140987880615 0.8296173473784708 0.8571933424924443 0.8908952380089996 0.7899400743876795 0.9216369368202135 0.8275248348435724 0.8595991661213235 0.8268655738916997 0.7591026723603879 1.0 11.518222066554996 -10.798187752774249 0.9473406269746765 1.0036439170787683 0.8560668314866069 0.0 0.08106552458829237 0.2727124485014127 0.41684571029092277 0.028346984622647745 0.0064232498637712045 1.5915205373349255e-11 10.798187752774249 -0.14757708559216143 VRGGAPDPSPGATATPGAPAQPSS(ph)PDAR ddPTM_A549_MK2206_60min_R1 1 VRGGAPDPSPGATATPGAPAQPSSPDAR 28 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 VRGGAPDPSPGATATPGAPAQPS(0.226)S(0.774)PDAR 120.34 4.5408e-21 21150000.0 1142.6 1057.3 1026.3 1329.2 1553.1 1172.4 1314.1 959.55 1669.3 1623.2 1411.6 True False 1335.4429461120435 1111.1120539065682 1171.8447723574425 1654.8540596700545 1324.6410473791293 1296.4625898238648 1552.8549600140816 1095.56915099863 1291.206215324335 1256.5179926386393 1061.0607618219367 1.2585923390654536 1.0471709951828667 1.1044087337140616 1.559622331928024 1.2484120561621763 1.221855181599329 1.4634929646702701 1.0325225382167929 1.2169012951786267 1.1842092723145137 1.0 10.051291559453107 -10.36977908390975 0.5387399412477983 0.9782926845055085 1.2506399342945032 0.08453537736260686 0.15915904235004869 1.1978771095986545 0.5724746886260896 0.15818678939809502 0.03636784059895029 4.267965656579108e-11 10.36977908390975 0.2723472497889946 VRGGAPDPSPGATATPGAPAQPSS(ph)PDAR ddPTM_A549_PD325901_60min_R1 2 VRGGAPDPSPGATATPGAPAQPSSPDAR 28 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 VRGGAPDPSPGATATPGAPAQPS(0.233)S(0.767)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.037)S(0.963)PDAR 173.76 1.2439000000000003e-57 68618000.0 3994.7 3803.8999999999996 4617.2 4578.1 5112.8 4146.9 4418.6 4540.2 5209.799999999999 4585.4 5165.700000000001 True False 4400.239003257286 4124.468002788212 4930.550957479117 4860.87883938052 4753.69456620246 4113.129021300315 4586.752240950698 4449.642149282002 4990.8502235675205 4295.877061450742 4530.351648070295 0.9712797913008738 0.9104079160267904 1.0883373610918894 1.0729583963865175 1.0492992455071999 0.9079050238963909 1.012449495593665 0.9821847165390194 1.1016474241449614 0.948243623269415 1.0 12.14540732196172 -8.728273852641866 24.99808312197469 1.0480002205166172 1.0008607726018999 0.0 0.06640821492658162 343.54342749880834 258941.1578981486 0.011225898063193403 0.012728578936588497 1.8695029180085685e-09 8.728273852641866 -0.04713944791471736 VRGGDSGLDGLGGPGVQLGS(ph)PDKK ddPTM_A549_MK2206_60min_R1 2 VRGGDSGLDGLGGPGVQLGSPDKK 24 2 Q9Y3Y4-2 Q9Y3Y4-2 1 VRGGDSGLDGLGGPGVQLGS(1)PDKK;VRGGDSGLDGLGGPGVQLGS(1)PDKK 127.14 4.1349e-23 9452100.0 2230.3 2750.2 2420.73 2316.1000000000004 3316.3 2324.6 2924.6 2513.9 4425.3 3622.0 3881.7 True False 2606.72011440022 2890.1734329460364 2764.0259142442096 2883.544603973682 2828.4766630760455 2570.5876290554033 3455.96196336442 2870.2530234958667 3422.9766157519794 2803.787684411751 2917.766760530044 0.8933956441147068 0.9905429974879161 0.947308726535117 0.988271113024077 0.9693977946894639 0.8810120342136012 1.1844544979107952 0.9837157178987309 1.1731494998353325 0.9609361935093168 1.0 11.510648846850195 -7.75246045136246 24.999996417793955 1.0819299424371527 0.9502411661762529 0.3560022009315513 0.07465104009437908 146.08169861567498 406733.49906094215 0.011623913248209 0.017099661596213674 1.7682332329765463e-08 7.75246045136246 -0.1316887762608998 VRGGDSGLDGLGGPGVQLGS(ph)PDKK ddPTM_A549_PD325901_60min_R1 2 VRGGDSGLDGLGGPGVQLGSPDKK 24 2 Q9Y3Y4-2 Q9Y3Y4-2 1 VRGGDSGLDGLGGPGVQLGS(1)PDKK;VRGGDSGLDGLGGPGVQLGS(1)PDKK 103.68 2.113e-11 19918200.0 2909.1 2735.7 2887.8 3382.3999999999996 4103.6 3886.7 3484.2000000000003 4147.2 4408.1 3325.1 4258.0 True False 3204.429690433768 2966.2470399399845 3083.7834737521002 3591.323166012249 3815.377292651467 3855.0480038312767 3616.7931376273973 4064.480842584539 4222.842886580674 3115.152618534882 3734.292993685911 0.858108802885029 0.794326274064577 0.8258011567293414 0.9617143518423967 1.0217134271742085 1.0323367797731842 0.9685349124299601 1.0884204451704573 1.130827948883717 0.8342014469143435 1.0 11.86661941092857 -6.491254156095634 1.6345760407665955 1.0557864621394497 0.814880883341685 0.4518514777453847 0.07982748478060636 0.13991853859689315 0.7282938746868975 0.008539059649299803 0.025748917145690067 3.2266053079128957e-07 6.491254156095634 -0.24090557879776475 VRGPVSGSPDS(ph)MNASR ddPTM_A549_PD325901_60min_R1 1 VRGPVSGSPDSMNASR 16 1 A0A499FJS7;O14920-4;O14920-2;O14920 A0A499FJS7 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta 1 VRGPVS(0.089)GS(0.2)PDS(0.484)MNAS(0.227)R 48.898999999999994 0.0053978 16530000.0 2724.6 2593.9 2230.4 2229.3 2523.8 2165.6 2481.2 2165.7 2146.3 2843.5 3537.5 True False 3001.1993862554896 2812.497056292843 2381.76835648476 2366.9987978923587 2346.536994637335 2147.9640716023923 2575.623423764737 2122.503414541218 2056.098474959302 2663.9609247252547 3102.4099260601006 0.9673767999017644 0.9065523652009997 0.767715554439797 0.7629548816259507 0.7563594272073887 0.6923534035781646 0.8302008713064055 0.6841466682762606 0.662742359637316 0.8586747039287445 1.0 11.599173609082882 -10.975567535247983 1.2672278321517447 0.9990223474904789 0.7676757968453466 0.20773394269145118 0.09719796634819801 0.3417667427048782 0.9829331067679797 0.06731221538296446 0.015799770713351813 1.0578703983753764e-11 10.975567535247983 -0.23134655064513232 VRHFS(ph)QSEETGNEVFGALNEEQPLPR ddPTM_A549_MK2206_60min_R1 2 VRHFSQSEETGNEVFGALNEEQPLPR 26 1 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 VRHFS(0.931)QS(0.02)EET(0.048)GNEVFGALNEEQPLPR;VRHFS(0.838)QS(0.138)EET(0.024)GNEVFGALNEEQPLPR 158.41 4.0318999999999995e-41 16248300.0 2283.85 2679.0 2616.5 2390.7 3693.6 2322.8 2836.8999999999996 2629.7 3850.3 3831.6 4278.7 True False 2669.308045228417 2815.349657065823 2987.5590440156384 2976.4216073225994 3150.276332882333 2568.5971542501484 3352.3280085716074 3002.468028118493 2978.2131976656615 2966.038898838229 3216.1807038874476 0.8299620857752125 0.8753704832762867 0.9289151695999324 0.9254522308789902 0.9795084987216499 0.7986482697148967 1.0423319823166641 0.9335507872705545 0.9260092861280614 0.9222239581417586 1.0 11.651132752521686 VRHFS(ph)QSEETGNEVFGALNEEQPLPR ddPTM_A549_PD325901_60min_R1 1 VRHFSQSEETGNEVFGALNEEQPLPR 26 1 A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-2;Q6GYQ0-6;Q6GYQ0-3 A0A1B0GUI1 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 VRHFS(0.933)QS(0.066)EET(0.001)GNEVFGALNEEQPLPR 158.35 4.0626e-41 11174000.0 2243.4 2441.4 2526.1 2380.8 2522.7 2773.2 2376.8 2196.0 2518.9 2656.6 2635.2 True False 2471.1483164962074 2647.1453460940465 2697.536336673311 2527.8566088108932 2345.51425484254 2750.6159786515286 2467.250424634864 2152.199057271327 2413.039392710707 2488.8618226218077 2311.0871059091387 1.0692579739542545 1.1454113258326144 1.1672153463087018 1.0937954706888824 1.0148965172473923 1.19018273764696 1.0675713686110908 0.9312496494694829 1.0441144284613462 1.0769225514080032 1.0 11.174355921315268 -8.002726319512657 24.999999989606962 1.0139673717949858 1.1133896242140215 0.41765119954854224 0.055400782943756825 75.90158864338966 696016.7894446318 0.007999255554202313 0.010945952807145849 9.937420801869149e-09 8.002726319512657 0.0994222524190358 VRHGT(ph)PDPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VRHGTPDPSPR 11 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 VRHGT(1)PDPS(1)PR;VRHGT(1)PDPS(1)PR 64.13600000000001 0.003389 15005300.0 1317.97 1447.81 1411.31 1077.71 1182.7 1040.96 1104.79 1172.6100000000001 1221.67 1734.2800000000002 1918.43 True False 1540.4111147271924 1521.4973449034983 1611.454979709424 1341.7489983802398 1008.7263967132169 1151.1136962666749 1305.516042366607 1338.831058467515 944.9636956061112 1342.504943490229 1442.0308850255444 1.0682233860059838 1.05510732169689 1.117489920946373 0.9304578787551223 0.699517886328314 0.7982586976604761 0.9053315403459482 0.9284343854006973 0.6553005940572292 0.9309821013066911 1.0 10.493886348821977 -6.459323695275213 4.66651529390189 0.8342882118717884 1.0743788319317815 0.5214234076882934 0.09773521170150344 0.16933187582508794 7.304124235789959 0.01851887079011781 0.043535755854302804 3.4727722676883303e-07 6.459323695275213 0.24009062005999315 VRHGT(ph)PDPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VRHGTPDPSPR 11 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 VRHGT(1)PDPS(1)PR;VRHGT(1)PDPS(1)PR 77.75399999999999 0.0005928 20832100.0 1672.4099999999999 1244.74 1865.97 1748.96 2004.6 1664.87 1751.24 1781.03 1710.46 1838.42 2011.65 True False 1842.1918320368293 1349.6386082154092 1992.6059451891426 1856.989287023648 1863.8038114945725 1651.3118507058891 1817.8843965152982 1745.5059594589948 1638.5753144848768 1722.3418474532793 1764.2298029000149 1.0441904047923132 0.7650015921944484 1.1294480695846576 1.0525778920473718 1.056440497961705 0.9359958935006579 1.0304124743426772 0.9893869588812965 0.9287765753596334 0.9762570865893543 1.0 10.784822778613599 -8.537049428361756 24.07390917121372 0.9659832956166241 1.000052285687603 0.026055858316845426 0.0892141602092978 508.65601120393706 864127.0187250996 0.01476670513355025 0.01674809265107576 2.9036921577158545e-09 8.537049428361756 0.034068990070978966 VRLGS(ph)EIRDSVV ddPTM_A549_MK2206_60min_R1 3 VRLGSEIRDSVV 12 2 Q9NPR2 Q9NPR2 SEMA4B Semaphorin-4B 1 VRLGS(0.999)EIRDS(0.001)VV;VRLGS(1)EIRDSVV;VRLGS(0.912)EIRDS(0.088)VV 67.234 0.0020747 18007100.0 2093.17 3048.88 2832.3599999999997 2440.35 3592.51 2122.69 2192.14 2104.01 4945.5599999999995 4969.280000000001 5296.38 True False 2446.445922906832 3204.054969180609 3234.0312378781286 3038.2358595514743 3064.056537969219 2347.3116468724143 2590.423462480231 2402.2598607603863 3825.398556436483 3846.716196685152 3981.1426733483095 0.6145084774993175 0.8048078735359322 0.8123374375724575 0.7631567388656758 0.7696424844257636 0.5896075171046874 0.6506733556226899 0.603409638353901 0.9608795439675014 0.9662341976430353 1.0 11.958966859292495 -8.818318778682576 8.121250204738237 0.9820981725175869 0.7072965643009913 0.716598920502405 0.07684715718237248 0.10006575209218149 12.711242307744286 0.014169620773051296 0.015079177771650068 1.5194318344915288e-09 8.818318778682576 -0.2748016082165956 VRLS(ph)PGPSSQPGLPGSLPQPPQPLHR ddPTM_A549_PD325901_60min_R1 1 VRLSPGPSSQPGLPGSLPQPPQPLHR 26 1 I3L2J0 I3L2J0 CIC 1 VRLS(0.644)PGPS(0.178)S(0.178)QPGLPGSLPQPPQPLHR 45.836000000000006 0.0086212 40936000.0 1149.7 1278.6 1250.4 1187.5 1344.9 1592.7 1039.6 1279.4 1205.2 1317.5 1351.1 True False 1266.4166976355928 1386.3521092470905 1335.259663266025 1260.849177991824 1250.4388636531228 1579.7295792580012 1079.1625468909483 1253.8813633301172 1154.549635195896 1234.3128251540438 1184.9232653285653 1.068775282494289 1.1699931546729074 1.1268743743467415 1.0640766494210114 1.055291005115332 1.3331914609845732 0.9107446688471503 1.058196256263422 0.9743665847220518 1.0416816525345067 1.0 10.210577919047697 -7.809145152132675 24.999999602385568 0.9887185955974648 1.1304946196375836 0.4261926304032575 0.08010291647465205 76.57575101448431 40128.90955169453 0.011281714656305494 0.015587946778286484 1.5518682498932905e-08 7.809145152132675 0.1417760240401188 VRPAS(ph)TGGLSLLPPPPGGK ddPTM_A549_MK2206_60min_R1 1 VRPASTGGLSLLPPPPGGK 19 1 D6RB24;Q9NVZ3-4;Q9NVZ3;Q9NVZ3-2 D6RB24 NECAP2 Adaptin ear-binding coat-associated protein 2 1 VRPAS(0.802)T(0.191)GGLS(0.007)LLPPPPGGK 92.792 1.0926000000000001e-06 17258000.0 2391.2 2989.5 2782.9 2801.2 3626.7 2878.0 2801.2 2744.8 4088.4 3815.7 4310.9 True False 2794.776100772902 3141.6527808130927 3177.557066153683 3487.4941257506453 3093.21723426044 3182.5480497382155 3310.1417806798922 3133.883805597457 3162.3839278332316 2953.730719881259 3240.384555212656 0.8624828483017781 0.9695308465037775 0.9806111009392681 1.0762593347571898 0.9545833778538801 0.9821513451601288 1.0215274527694624 0.9671332992117012 0.9759285893231566 0.9115370936852942 1.0 11.661949320912889 -5.237210308913318 2.5242836168873213 0.9917935278334699 0.8298383122491194 0.43916412022431706 0.039287600955833016 0.28289226733422357 2.1287216977976757 0.0040597534332469385 0.10012573650335503 5.791481735928123e-06 5.237210308913318 -0.16195521558435044 VRPAS(ph)TGGLSLLPPPPGGK ddPTM_A549_PD325901_60min_R1 2 VRPASTGGLSLLPPPPGGK 19 1 D6RB24;Q9NVZ3-4;Q9NVZ3;Q9NVZ3-2 D6RB24 NECAP2 Adaptin ear-binding coat-associated protein 2 1 VRPAS(0.823)T(0.175)GGLS(0.003)LLPPPPGGK;VRPAS(0.847)T(0.153)GGLSLLPPPPGGK 129.85 4.9822e-17 86288000.0 9497.4 9582.5 11321.5 8761.6 12468.3 10569.7 10226.599999999999 11682.3 11363.7 11583.5 12301.6 True False 10461.56905638365 10390.050904786669 12089.845071710091 9302.784132962664 11592.569621299897 10483.623867572865 10615.778859210239 11449.287361912939 10886.123207331237 10852.115833147525 10788.581186267395 0.9696890513925972 0.9630599914298269 1.1206149226646276 0.8622805883691197 1.0745221657186848 0.9717333249452018 0.9839828496376231 1.0612412479674849 1.0090412278852758 1.005889064167307 1.0 13.397217527032867 VRPGS(ph)ALAAAVAPPEPAEPVR ddPTM_A549_PD325901_60min_R1 1 VRPGSALAAAVAPPEPAEPVR 21 1 Q7Z2K8 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 VRPGS(1)ALAAAVAPPEPAEPVR 53.262 0.0025694000000000003 4274600.0 1173.1 1313.7 1333.5 1393.2 1501.3 1146.7 1191.8 1566.7 1591.5 1373.7 1628.6 True False 1292.1922484094234 1424.4101094305518 1423.999328986919 1479.2547998132293 1395.853867203832 1137.361655387173 1237.1546011779847 1535.4509394476265 1524.6147895903332 1286.9643475628911 1428.2925245460008 0.9047112032040927 0.9972817787331884 0.9969941762732067 1.0356805587030762 0.9772885058314789 0.7963086243475904 0.8661773270648662 1.075025537878305 1.0674387517885733 0.9010509580115373 1.0 10.480075768575432 -8.276661224032878 24.95520026324753 1.035974353581466 0.9433415419248582 0.13557682219861122 0.07777930887605992 816.4959687857751 1338587.9390750744 0.012127760616139328 0.014690544931765458 5.28857631857942e-09 8.276661224032878 -0.09263281165660786 VRPGS(ph)ALAAAVAPPEPAEPVRDVSWDEK ddPTM_A549_MK2206_60min_R1 2 VRPGSALAAAVAPPEPAEPVRDVSWDEK 28 2 Q7Z2K8 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 VRPGS(1)ALAAAVAPPEPAEPVRDVSWDEK;VRPGS(1)ALAAAVAPPEPAEPVRDVSWDEK 114.2 6.3729e-21 10192800.0 2337.9 1846.72 1628.3 1751.1100000000001 3401.1000000000004 1870.69 1985.55 2137.88 3107.3999999999996 2727.6 3461.5 True False 2732.4803638327894 1940.7101600211276 1859.2174245636013 2180.132028610315 2900.8026954099255 2068.645174136478 2346.2987336245046 2440.9310369829127 2403.5788614981348 2111.4332655995277 2601.914017460071 1.050180884339973 0.7458778987307215 0.7145575957112245 0.8378954930795561 1.114872619135056 0.7950474766863519 0.90175875062732 0.938129016025554 0.9237733627510311 0.811492328889738 1.0 11.345357572377461 -8.986452226239193 0.23780662196787142 1.0252998737805339 0.8309695903918356 0.0 0.1255280700352434 2.9467422933969183 0.5929313374167403 0.21229907265081654 0.16006625346024447 1.0316865619687628e-09 8.986452226239193 -0.1943302833886983 VRPPQEEQEREQLQPHENGEGNS(ph)ET ddPTM_A549_MK2206_60min_R1 4 VRPPQEEQEREQLQPHENGEGNSET 25 2 P06756-3;P06756-2;P06756 P06756-3 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain 1 VRPPQEEQEREQLQPHENGEGNS(0.97)ET(0.03);VRPPQEEQEREQLQPHENGEGNS(1)ET;VRPPQEEQEREQLQPHENGEGNS(0.983)ET(0.017);VRPPQEEQEREQLQPHENGEGNS(0.981)ET(0.019) 235.57 1.4259999999999997e-111 187331000.0 4806.65 5054.1 5442.02 4453.07 6239.5199999999995 4469.6 4082.4199999999996 4536.0 7647.24 6632.6900000000005 6938.999999999999 True False 5617.895008690228 5311.332102193496 6213.780267041457 5544.072349905909 5321.694873442163 4942.57010531964 4824.142870299591 5178.991890917394 5915.15235013291 5134.360722396734 5215.854793342606 1.0770804079631926 1.0183052083759607 1.1913253940605437 1.062926896849627 1.0202919913021062 0.9476050045772401 0.9248997645519221 0.9929325290128354 1.1340715155036276 0.9843757017450161 1.0 12.348687990918092 -6.519164298897636 24.38835987217235 1.0373913165424014 1.0943908687924229 0.16795518058980685 0.06877216046462836 220.57563721018536 1448257.2142449704 0.011664776501587454 0.024737142697596394 3.025768526424621e-07 6.519164298897636 0.05699955225002151 VRPPQEEQEREQLQPHENGEGNS(ph)ET ddPTM_A549_PD325901_60min_R1 3 VRPPQEEQEREQLQPHENGEGNSET 25 2 P06756-3;P06756-2;P06756 P06756-3 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain 1 VRPPQEEQEREQLQPHENGEGNS(0.972)ET(0.028);VRPPQEEQEREQLQPHENGEGNS(0.983)ET(0.017);VRPPQEEQEREQLQPHENGEGNS(0.907)ET(0.093) 220.67 2.6779e-82 131578000.0 4317.45 5026.4 5732.1 5758.5 5751.0 5444.8099999999995 5242.900000000001 5056.59 6007.4 4717.0 5621.54 True False 4755.754345661294 5449.992368152331 6121.1147759174555 6114.189466497615 5347.069599872938 5400.469272581002 5442.421428524968 4955.732345631884 5754.9298692962375 4419.167814991745 4930.126217878129 0.964631357391113 1.1054468237322221 1.2415736444475685 1.2401689523334545 1.0845705289416012 1.0954018282528482 1.1039111754967046 1.0051938077489577 1.1672986887084393 0.8963599753220325 1.0 12.267408866676208 -6.960575847508209 24.999736171033813 1.0782794142668828 1.145451434112886 0.11589188291858421 0.09813979217517335 290.1617956012644 183996.86430193458 0.01334735120566896 0.0252241066513457 1.0950252975987672e-07 6.960575847508209 0.0671720198460033 VRQS(ph)PLATR ddPTM_A549_MK2206_60min_R1 1 VRQSPLATR 9 1 O75381;O75381-2;K7EK59 O75381 PEX14 Peroxisomal membrane protein PEX14 1 VRQS(0.996)PLAT(0.004)R 41.383 0.024812999999999998 5773300.0 1373.6 1057.5 1047.4 1021.9 1481.9 884.55 1107.9 1181.6 1588.0 1628.3 1598.6 True False 1605.430098704272 1111.3222330522983 1195.937069635765 1272.2655458748343 1263.9144730610592 978.1524938832309 1309.1910891101154 1349.095418498236 1228.3205355149123 1260.4658990965365 1201.6235008844922 1.3360508491408045 0.9248506143848512 0.9952677096906465 1.0587888343880956 1.0518390095822159 0.8140257686065823 1.08951854565631 1.1227272248796671 1.0222174704562361 1.0489690807218164 1.0 10.230769218570622 -5.251924989927845 24.78205323881314 1.010986479412136 1.3360510442515032 0.5729904484099984 0.08020246496243015 588.8560724226418 1533753.1968573208 0.010224417811072684 0.18052809120262764 5.598542895397694e-06 5.251924989927845 0.3250645648393673 VRQS(ph)PLATR ddPTM_A549_PD325901_60min_R1 2 VRQSPLATR 9 1 O75381;O75381-2;K7EK59 O75381 PEX14 Peroxisomal membrane protein PEX14 1 VRQS(1)PLATR;VRQS(1)PLATR 112.84 7.309100000000001e-05 38362000.0 4967.1 4763.9 4141.7 4378.1 5110.8 4483.2 4331.3 3992.7 4712.0 4705.9 5010.1 True False 5471.356335414246 5165.3705719085065 4422.780668065334 4648.525293613477 4751.835039302835 4446.690305600222 4496.129991678305 3913.0624662874443 4513.971026421391 4408.768670886079 4393.889461640622 1.2452193855080076 1.1755804548573743 1.0065753148041017 1.0579522617025001 1.0814644020490585 1.0120168803563585 1.02326879884673 0.8905691643927602 1.0273292184132305 1.0033863412758457 1.0 12.101282860579662 -4.106525787206669 0.6203679128435055 1.005621241988707 2.1602808705804337 0.7267564975523262 0.0471555915273028 4.339970385559018 0.3916773399209319 0.007788939056758267 4.984798298679322 7.824817420828345e-05 4.106525787206669 1.1546596285917268 VRRPS(ph)ESDKEDELDK ddPTM_A549_MK2206_60min_R1 1 VRRPSESDKEDELDK 15 3 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 VRRPS(0.955)ES(0.045)DKEDELDK 64.2 0.0012357000000000002 13034000.0 2945.4 3265.2 2480.6 2132.3 3677.6 3009.9 2717.3 2964.3 4013.7 3585.8 4251.7 True False 3442.511511883785 3431.384733203184 2832.386380502653 2654.713595722586 3136.62991168726 3328.40562019008 3210.9982366990857 3384.498602788016 3104.603358561844 2775.7652895537426 3195.8855490495407 1.0771698357306916 1.0736882408769868 0.8862602671566281 0.830666040751084 0.9814587736472906 1.0414658375923227 1.004728795013964 1.059017461934633 0.9714375909003236 0.8685433964865412 1.0 11.642000028104693 -6.996027578766182 24.998560946908846 0.9977636796447071 0.9609641758529218 0.01297060239282144 0.08083378633839892 326.8820757155065 2057043.203515368 0.01081105801268445 0.02037198771870125 1.0091887980746942e-07 6.996027578766182 -0.036799503791785315 VRS(ph)LETENAGLR ddPTM_A549_MK2206_60min_R1 2 VRSLETENAGLR 12 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 VRS(1)LETENAGLR;VRS(1)LETENAGLR 121.99 3.2412999999999998e-06 11994600.0 816.14 664.57 854.6099999999999 791.21 1116.52 790.58 1012.28 945.19 1340.5700000000002 1279.03 1421.78 True False 953.8844792927384 698.393774392025 975.8065486742601 985.0564855187662 952.2813870451008 874.2386508554682 1196.198172835442 1079.1735770229755 1036.9330354503943 990.0962346750866 1068.71278686823 0.8925545675260553 0.6534906131689574 0.9130671595441244 0.9217223725799975 0.8910545459418322 0.8180295600442365 1.1192887252156838 1.0097882146478288 0.9702635246734873 0.9264380915442002 1.0 10.061658470148007 -6.641930065552922 0.6966785115881138 0.9931651769328022 0.7783536741228483 0.369654633058787 0.08950850735551338 0.6371947921489413 0.5064555598474655 0.014929110318886154 0.07544730866155357 2.2807093050862099e-07 6.641930065552922 -0.21481150280995387 VRS(ph)LETENAGLR ddPTM_A549_PD325901_60min_R1 1 VRSLETENAGLR 12 1 P02545;P02545-3;P02545-6;P02545-2;Q3BDU5 P02545;P02545-2 LMNA Prelamin-A/C;Lamin-A/C 1 VRS(1)LETENAGLR 111.81 1.6805e-05 9464900.0 1012.1 940.81 1321.6 1013.0 929.93 1149.4 1043.5 1016.5 1018.4 1334.9 1340.4 True False 1114.8476469313596 1020.0953604729824 1411.2917234264064 1075.5707093100777 864.6149248843403 1140.039667482356 1083.2109635251095 996.225110071176 975.6001895813978 1250.6141861845401 1175.5392974956771 0.9483712278325253 0.8677679790426007 1.2005483155118395 0.9149593821333165 0.7355049097263546 0.9698014093710451 0.9214587430915663 0.847462192198504 0.8299171211543316 1.0638642101108824 1.0 10.199107052793384 -6.488471719825448 24.939312153214086 0.9027847224820422 1.0027781798653055 0.12432309189761859 0.11155555877566653 898.1433991229039 651002.7167151829 0.014992805468396542 0.03482346818029943 3.2473438737351506e-07 6.488471719825448 0.09999345738326326 VRS(ph)LETENR ddPTM_A549_MK2206_60min_R1 4 VRSLETENR 9 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 VRS(1)LETENR;VRS(0.999)LET(0.001)ENR;VRS(1)LETENR;VRS(0.963)LET(0.037)ENR 130.36 1.3825e-05 383160000.0 2614.8 2554.2 2408.2 2303.6000000000004 3136.7 2324.9 2049.28 2244.5099999999998 2992.9 3454.2 3045.8 True False 3056.1143142777596 2684.197870129721 2749.7189718320105 2867.982103412535 2675.2955851613633 2570.9193748562807 2421.6076496900214 2562.6761660235907 2315.012928679209 2673.8938209539106 2289.4438001964136 1.3348719518756358 1.1724235685101514 1.20104235430287 1.252698189475753 1.1685351634016292 1.1229449592235978 1.0577274923639834 1.1193444302077806 1.0111682708615086 1.1679228905835184 1.0 11.160781435752138 -7.4662020167966485 0.5013085366553004 0.9962379542547649 1.2701383742089756 0.5081284706068254 0.066970770918614 0.26723327521786727 0.13021642613034567 0.010852194725526553 0.0297590542241405 3.4182040405269055e-08 7.4662020167966485 0.27390041995421066 VRS(ph)LETENR ddPTM_A549_PD325901_60min_R1 4 VRSLETENR 9 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 VRS(1)LETENR;VRS(0.999)LET(0.001)ENR;VRS(1)LETENR;VRS(1)LETENR 189.43 1.5275e-46 449090000.0 7374.1 6864.5 6721.4 7965.4 7754.8 6841.2 7507.400000000001 7642.099999999999 7269.5 8201.8 8292.0 True False 8122.713203474494 7442.9955059648455 7177.554623061631 8457.404667264062 7210.129600607661 6785.487535392634 7793.098215206911 7489.672320388524 6963.9881953672175 7683.936948272051 7272.136567318826 1.1169637875034115 1.023495012375574 0.986993926285399 1.16298760192044 0.991473349525664 0.933080322760548 1.0716380451694625 1.029913595688963 0.9576261571686601 1.0566271517512291 1.0 12.82816357758569 -7.0811283213402305 0.6313161849115249 0.9832031080693091 1.068656587753265 0.05960971888064748 0.06311669592271459 1.0244237767832647 0.7433704051139944 0.011918961755794669 0.04153046517398937 8.29605607060671e-08 7.0811283213402305 0.08545347968395589 VRS(ph)LLGLSNSEPNGSVETK ddPTM_A549_MK2206_60min_R1 1 VRSLLGLSNSEPNGSVETK 19 1 G3V340;Q13033-2;Q13033;G3V3G7 G3V340 STRN3 Striatin-3 1 VRS(0.607)LLGLS(0.181)NS(0.211)EPNGSVETK 56.424 0.0021585000000000003 3582400.0 1100.7 1409.8 925.97 1080.8 1271.6 908.05 847.09 975.47 1528.4 1390.5 1954.8 True False 1286.471250468691 1481.5527982573335 1057.2864697065388 1345.5960485189553 1084.5493244783336 1004.1392482851932 1000.9952880894374 1113.7458597515863 1182.21984035327 1076.3850842558086 1469.3692102646096 0.8755262064032351 1.0082917131430362 0.7195512620794189 0.9157644240256234 0.7381053835223782 0.6833811687835516 0.6812415022015974 0.7579754985821561 0.8045764346323626 0.732549094357278 1.0 10.520981233920057 -10.423812742647147 0.8736274625055026 0.9944195570002837 0.7972604882428178 0.0 0.12347982579627535 0.4991079426712542 0.7133885012058558 0.05831828329699398 0.019264226213703852 3.7686625963913327e-11 10.423812742647147 -0.19715906875746592 VRS(ph)LLGLSNSEPNGSVETK ddPTM_A549_PD325901_60min_R1 2 VRSLLGLSNSEPNGSVETK 19 1 G3V340;Q13033-2;Q13033;G3V3G7 G3V340 STRN3 Striatin-3 1 VRS(0.996)LLGLS(0.001)NS(0.003)EPNGSVETK;VRS(1)LLGLSNSEPNGSVETK 121.38 8.906999999999999e-15 19904000.0 3606.4 4034.0 4231.4 3850.5 4617.1 3639.0 4280.0 4816.9 4619.299999999999 4627.3 5587.6 True False 3972.519073108638 4373.959337324234 4518.568249475256 4088.336639880014 4292.810824130296 3609.3651905066026 4442.8777421058685 4720.823150715052 4425.1668850484575 4335.131488300042 4900.3606227147475 0.8106585165782972 0.892579072048193 0.9220889231152172 0.8342930152791733 0.8760193697238806 0.7365509333692778 0.9066430175590958 0.9633623959903111 0.9030288229271098 0.8846556043661998 1.0 12.258672207248743 -9.750216410631346 0.4018998711131312 1.0100614551154525 0.8530144952414302 0.15143993282401202 0.06321686801139689 0.8877479088119262 0.3014648976453012 0.056101128844914444 0.02126332811559203 1.7773935072275513e-10 9.750216410631346 -0.15704695987402228 VRS(ph)TLTK ddPTM_A549_PD325901_60min_R1 1 VRSTLTK 7 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VRS(0.984)T(0.016)LTK 48.423 0.015916999999999997 1849700.0 1273.7 1302.0 800.46 590.7 967.67 790.19 924.72 997.98 731.45 1448.8 1220.7 True False 1403.005086351618 1411.7241093693967 854.7840291570076 627.1861974229646 899.7041974802715 783.7549546266597 959.9107256262 978.0745059998351 700.7097001858926 1357.3225207462458 1070.5616386548595 1.3105318140433908 1.3186761587527098 0.79844447838709 0.5858478155550316 0.8404039197693772 0.7320969912684645 0.8966421838468915 0.9136087738290036 0.654525320995362 1.2678602256397828 1.0 10.06415214738378 -5.760390255072553 24.996563574910027 0.8175197840988021 1.3146041794275118 0.495778210096513 0.17582426152782193 11.836502396790213 281976.22879697045 0.019582850621551514 0.06815687132991861 1.7362399501272892e-06 5.760390255072553 0.49708439532870974 VRSS(ph)FGR ddPTM_A549_PD325901_60min_R1 2 VRSSFGR 7 1 Q86W92-2;Q86W92-3;Q86W92-4;Q86W92;F5GZP6;H0YGH8;A0A087WVX8 Q86W92-2 PPFIBP1 Liprin-beta-1 1 VRS(0.03)S(0.97)FGR;VRS(0.154)S(0.846)FGR 79.986 0.0044818 98548000.0 5700.5 5858.8 6100.299999999999 5944.6 7399.700000000001 6880.3 7804.700000000001 7600.9 7422.700000000001 6996.9 7419.5 True False 6279.210563513698 6352.541637460386 6514.3030420839195 6311.7844408338515 6879.9705995791655 6824.269117956193 8101.712129395718 7449.2940867092975 7110.749732134569 6555.114539901575 6506.948536085627 0.965000803170801 0.9762704595296942 1.001130254213247 0.9700068174553014 1.0573267271786257 1.0487664194838486 1.2450862465664205 1.1448214236516085 1.092793295152165 1.007402241396076 1.0 12.66776542806184 -6.820072199639108 4.7635619017028485 1.0696599871806953 0.9794279847798876 0.36982259574376153 0.06534896612621584 0.23384648732076205 10.729002900548691 0.011006980441079567 0.02156135569883611 1.5133096461308416e-07 6.820072199639108 -0.09023200240080775 VRST(ph)LTK ddPTM_A549_MK2206_60min_R1 1 VRSTLTK 7 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VRS(0.178)T(0.821)LT(0.001)K 55.06399999999999 0.016214 9873800.0 1800.1 2185.5 1830.2 1903.5 3240.9 2112.6 2101.9 2242.3 3016.2 3221.1 2783.2 True False 2103.9128717804015 2296.7326149747505 2089.7498805111472 2369.857585451362 2764.167903194269 2336.1539297696145 2483.7880225657095 2560.1528917557484 2333.035515881663 2493.4512728488926 2092.054627587711 1.005668228752881 1.0978358713429237 0.9988983332241084 1.1327895334090667 1.3212694672230203 1.1166792200179627 1.187248167333802 1.2237504977141962 1.1151886213276467 1.1918671912138454 1.0 11.030704808293272 -10.168235519000635 0.9438598680118554 1.0099655454088883 1.1357985581665022 0.0 0.1024992684564756 0.5633475138517652 0.9962438026212348 0.0387327538415329 0.01732978803833253 6.788353986181935e-11 10.168235519000635 0.12583301275761394 VRST(ph)LTK ddPTM_A549_PD325901_60min_R1 2 VRSTLTK 7 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VRS(0.014)T(0.986)LTK;VRS(0.03)T(0.969)LT(0.001)K 74.267 0.007390300000000001 15248700.0 5341.8 5770.0 6260.2 5308.4 7226.5 6849.5 6637.0 6963.799999999999 7172.5 6827.9 7377.299999999999 True False 5884.095603574684 6256.258149816765 6685.054817640729 5636.287811748882 6718.935570071599 6793.7199429444845 6889.5746669057535 6824.901546004579 6871.06476804063 6396.785228743298 6469.93886855779 0.9094514991741034 0.9669733017448654 1.0332485288428839 0.8711500875440672 1.0384851706596283 1.0500439155553982 1.0648593142645109 1.054863374238637 1.0619984064196042 0.9886933027806493 1.0 12.659536365590045 -6.828031639876323 24.99799663970895 1.0367404094553518 0.9530488574218203 0.5043854168158286 0.04351543226576682 36.24209020791853 13604.495253622928 0.006163952811195008 0.011648779413430255 1.4858273906067557e-07 6.828031639876323 -0.08369155203353151 VRT(ph)PVMNSEAK ddPTM_A549_MK2206_60min_R1 1 VRTPVMNSEAK 11 1 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 VRT(1)PVMNSEAK 52.836999999999996 0.010019 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VRT(ph)PVMNSEAK ddPTM_A549_PD325901_60min_R1 1 VRTPVMNSEAK 11 1 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 VRT(1)PVMNSEAK 53.251999999999995 0.0083848 17312000.0 6282.1 6330.4 6345.3 6124.2 7705.0 7527.4 7291.2 6376.4 7490.2 7518.2 9075.0 True False 6919.854167362407 6863.885024540732 6775.9302153886065 6502.47792493266 7163.827380806985 7466.099350101519 7568.670605897729 6249.217699810965 7175.412941872139 7043.499568935964 7958.832531164781 0.869455933425663 0.8624236026657791 0.8513723826774559 0.8170140406234955 0.9001103305987711 0.938089766415634 0.9509774927743138 0.7851927622978124 0.9015660165954028 0.8849915538937898 1.0 12.95834110424675 -11.994560249997233 0.23437287900361484 1.1515900747193453 0.8541326156947335 0.0 0.05825757372999584 7.004799993633968 0.2982055631955247 0.6137789439041487 0.03534641053457515 1.0126042597258476e-12 11.994560249997233 -0.29745745902461174 VRVDS(ph)TAK ddPTM_A549_MK2206_60min_R1 4 VRVDSTAK 8 1 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 1 VRVDS(0.533)T(0.467)AK;VRVDS(0.894)T(0.106)AK;VRVDS(0.972)T(0.028)AK;VRVDS(0.848)T(0.152)AK 87.789 0.00075334 341786500.0 9579.6 9252.7 8364.5 8288.5 12685.599999999999 9218.2 10641.199999999999 11310.300000000001 16440.0 16506.0 16601.4 True False 11196.402281266346 9723.622908522932 9550.711876043868 10319.182872084908 10819.56504451271 10193.663805454067 12574.568298076132 12913.569661341064 12716.366249285367 12777.283136085129 12478.814204668966 0.8972328698569129 0.7792104881956512 0.7653541209444769 0.8269361738092046 0.8670347091524573 0.816877600568818 1.0076733327251028 1.0348394847091666 1.0190364277182298 1.0239180523502378 1.0 13.60719322862763 -7.763253359900558 24.08344591882228 1.0114780556698246 0.8225669478634571 0.8797763037276445 0.03524046209570575 7.321136352612927 97200.80390941695 0.005424272661419487 0.007707753271599356 1.7248313615936856e-08 7.763253359900558 -0.18891110780636755 VRVDS(ph)TAK ddPTM_A549_PD325901_60min_R1 4 VRVDSTAK 8 1 F8VQ14;F5GWF6;P78371-2;P78371 F8VQ14 CCT2 T-complex protein 1 subunit beta 1 VRVDS(0.79)T(0.21)AK;VRVDS(0.982)T(0.018)AK;VRVDS(0.887)T(0.113)AK;VRVDS(0.892)T(0.108)AK 128.51 0.00088507 629915000.0 32250.300000000003 29272.300000000003 31078.4 30600.5 36577.6 31704.7 30886.5 35661.4 39606.5 40147.3 41117.0 True False 35524.32671458395 31739.1794521458 33187.567113601115 32490.623386222145 34008.51556186966 31446.50743485978 32061.902659241317 34950.10540117292 37941.976540313866 37612.39262641894 36059.86966213797 0.9851485057330551 0.8801800935368106 0.9203462859003978 0.9010188802855421 0.943112548118215 0.8720638130280844 0.8891297433863321 0.9692243962231989 1.0521939456745197 1.043054037045261 1.0 15.138106561729382 -8.512793391979184 4.227838447688894 1.0244463813669402 0.9116336568956567 0.72193209608867 0.0322662264177648 0.0822001222005446 3.4979469375887033 0.005543964959571054 0.006515103204887631 3.070482369391939e-09 8.512793391979184 -0.11281272447128354 VRVES(ph)GYFSLEK ddPTM_A549_PD325901_60min_R1 2 VRVESGYFSLEK 12 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 VRVES(1)GYFSLEK;VRVES(1)GYFSLEK 115.8 7.1176e-06 5919300.0 1990.52 1923.98 2119.86 1867.92 2450.3 2170.66 2204.0 2823.7 2517.8 2347.7400000000002 2520.8 True False 2192.5961250566234 2086.120546808397 2263.7264473537393 1983.2971760458843 2278.1993810761005 2152.9828646400297 2287.8744260750773 2767.379088350201 2411.9856218853515 2199.5032957321864 2210.7575806677883 0.9917849628697512 0.9436224781272748 1.02395959970878 0.8971120096518241 1.0305061943462568 0.9738665530164972 1.034882542564434 1.251778626724997 1.09102221020397 0.9949093084497296 1.0 11.110325120606452 -7.856302634828531 4.966682369056927 1.0633165768016266 0.9763663279170486 0.30938093348503604 0.07261479708482506 0.24783630251419372 10.24884350447149 0.012064885958326048 0.01686679546262759 1.3921863303252803e-08 7.856302634828531 -0.08695024888457803 VRVESGYFS(ph)LEK ddPTM_A549_PD325901_60min_R1 1 VRVESGYFSLEK 12 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 VRVESGYFS(1)LEK 88.385 7.749e-05 8052000.0 1946.1 1629.9 2055.1 2382.9 1980.3 2549.7 2326.0 2322.7 2305.7 2364.0 2880.5 True False 2143.666639356901 1767.257393134548 2194.5714443202232 2530.0863210414464 1841.210559664123 2528.9360885503406 2414.517202836038 2276.3719263771 2208.7994472877353 2214.7366365572348 2526.216760993955 0.8485679742356957 0.6995668069430471 0.868718582746144 1.0015317608952798 0.7288410828767076 1.001076442686302 0.9557838583439814 0.9010992095078364 0.8743507213603753 0.876700950905667 1.0 11.302762718955504 -2.0000000000000004 0.09908979793853197 1.035449763629658 0.35688748147848964 0.16719975543555854 0.08960554164955725 109.46183705486106 0.7457687263107251 0.5735157952079957 10.13843013285503 0.00999999999999999 2.0000000000000004 -0.6785622821511683 VRVS(ph)GQGLHEGHTFEPAEFIIDTR ddPTM_A549_PD325901_60min_R1 2 VRVSGQGLHEGHTFEPAEFIIDTR 24 1 Q60FE5;P21333-2;P21333;H0Y5C6 Q60FE5 FLNA Filamin-A 1 VRVS(0.993)GQGLHEGHT(0.007)FEPAEFIIDTR;VRVS(0.983)GQGLHEGHT(0.017)FEPAEFIIDTR 88.66799999999999 1.3612e-07 5128100.0 992.5500000000001 1183.37 1057.51 1071.23 1207.33 1145.21 1172.78 1249.58 1101.33 1035.37 1245.54 True False 1093.3129453233082 1283.0967429373757 1129.2789879242282 1137.3974441601536 1122.5313058623883 1135.8837894531648 1217.4107846698403 1224.6561466234534 1055.044930078241 969.9965615026508 1092.346476128593 1.0008847643269199 1.1746243256854039 1.0338102539832679 1.0412423796076375 1.0276330179054305 1.0398566885837115 1.1144914285662277 1.121124270903296 0.9658519097506927 0.887993491717422 1.0 10.093214815013374 -8.775676525969699 24.999994650204066 0.9838745065924477 1.0697553185348094 0.43734810435965754 0.056352808065046146 167.9575327814177 294927.17024809914 0.008245954020065028 0.008798271993731278 1.6761908825496847e-09 8.775676525969699 0.08588081194236175 VRVS(ph)PQDANPLMANGT(ph)LTR ddPTM_A549_PD325901_60min_R1 2 VRVSPQDANPLMANGTLTR 19 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4 O60716-3;O60716-8 CTNND1 Catenin delta-1 2 VRVS(1)PQDANPLMANGT(0.818)LT(0.182)R;VRVS(1)PQDANPLMANGT(0.823)LT(0.177)R 97.04700000000001 8.9353e-07 8598100.0 1366.73 1903.96 1809.53 1915.06 1907.3600000000001 1738.75 1465.44 1866.22 1930.47 1858.67 2204.87 True False 1505.4794234665515 2064.4133911482018 1932.3355873878531 2033.3489067831772 1773.3936136347834 1724.5901964807244 1521.208121119538 1828.9967780787313 1849.3390592902595 1741.3132589973927 1933.6849678225105 0.7785546500689023 1.0676058538495556 0.9993021715237426 1.0515409389942647 0.9171057556659664 0.8918671992484669 0.7866887039167214 0.9458607831752104 0.9563807393987079 0.9005154862212409 1.0 10.917137057563231 -9.676261447268393 1.1794610365747642 0.9910636620999422 0.9364824560302045 0.0 0.09183668973974536 0.9396885771027921 2.6764012434916187 0.024688503636615622 0.01712754931416486 2.1073591281403884e-10 9.676261447268393 -0.05458120606973771 VRVS(ph)PQDANPLMANGTLTR ddPTM_A549_MK2206_60min_R1 4 VRVSPQDANPLMANGTLTR 19 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VRVS(0.996)PQDANPLMANGT(0.001)LT(0.002)R;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR 112.74 5.0286999999999995e-11 75325000.0 4961.5 5361.2 5537.6 4505.799999999999 7518.199999999999 5756.299999999999 5081.7 5412.0 8608.3 8069.4 8635.9 True False 5798.879902971205 5634.062180463343 6322.914948267149 5609.721202273047 6412.28273929932 6365.427845277309 6004.979111409762 6179.167573554881 6658.533794630371 6246.516935558303 6491.3676912851115 0.8933217433910584 0.8679314511835878 0.974049730191048 0.8641817054677544 0.9878169045805301 0.9805988734582265 0.9250714790769989 0.9519053406650543 1.025752062014556 0.962280559756994 1.0 12.664306761893188 -6.966301370980975 0.40749869872488204 1.0140067204791807 0.8702055650397377 0.36387670160413244 0.04112441405017165 0.954794928031344 0.24996876675197416 0.01179732129635078 0.05499334827227219 1.0806837696360173e-07 6.966301370980975 -0.14380115543944305 VRVS(ph)PQDANPLMANGTLTR ddPTM_A549_PD325901_60min_R1 5 VRVSPQDANPLMANGTLTR 19 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(0.999)PQDANPLMANGTLTR 121.26 7.4169e-15 251971600.0 14513.9 14254.400000000001 16371.2 15577.1 17015.0 16897.7 14735.8 17347.399999999998 17026.8 18727.7 19949.5 True False 15987.340443431534 15455.668313821147 17482.248080023004 16539.262088839114 15819.925098563383 16760.09073361457 15296.578932739165 17001.39249822797 16311.222808291965 17545.229825910716 17495.837970299923 0.9137796355093628 0.883391143657019 0.9992232501066832 0.9453255178125994 0.9042107686078548 0.9579472993557483 0.8742981592939926 0.9717392517631166 0.9322916019216169 1.0028230631590576 1.0 14.094724144249785 -10.759619976986663 0.5203688334380027 1.014674226889397 0.929342482558802 0.373390438346075 0.03522074504787421 1.314622805591379 0.4698164790675387 0.056388447981584024 0.007970260145215952 1.739322131362916e-11 10.759619976986663 -0.08533174433059487 VRYDS(ph)SNQVK ddPTM_A549_MK2206_60min_R1 2 VRYDSSNQVK 10 1 O95983;A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2 O95983 MBD3 Methyl-CpG-binding domain protein 3 1 VRYDS(0.879)S(0.121)NQVK;VRYDS(0.944)S(0.056)NQVK 113.77 8.365899999999999e-05 14789000.0 3960.1 4420.4 3989.4 4012.1000000000004 5741.700000000001 4665.8 4835.1 4615.6 7161.4 7148.799999999999 7606.3 True False 4628.468064850606 4645.37947894504 4555.156908158218 4995.0646801100165 4897.103535983996 5159.531859092623 5713.575083451863 5269.875434682174 5539.354334405851 5533.881114942774 5717.445786799518 0.809534228647493 0.8124920903789464 0.7967118671549451 0.8736531777253856 0.8565194526707128 0.9024190261681166 0.9993230013030309 0.9217184790539339 0.9688512215008936 0.9678939374850638 1.0 12.481155065633745 -7.171365601013672 0.5833116882178518 0.9891409845855391 0.7891347071118024 0.8685890091007764 0.026499285574308213 0.2005483384365307 0.12496736217678592 0.005407719508644127 0.01814502228936006 6.73960430435411e-08 7.171365601013672 -0.20000627747373667 VRYDS(ph)SNQVK ddPTM_A549_PD325901_60min_R1 2 VRYDSSNQVK 10 1 O95983;A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2 O95983 MBD3 Methyl-CpG-binding domain protein 3 1 VRYDS(0.847)S(0.153)NQVK;VRYDS(0.92)S(0.08)NQVK 131.17 9.474700000000002e-07 27459000.0 7322.5 7357.7 8486.7 8082.8 8862.099999999999 7843.7 8341.0 8703.900000000001 8306.1 8417.6 10054.4 True False 8065.874809460413 7977.759200850396 9062.658496672884 8582.056198629321 8239.656668585281 7779.82350777045 8658.421319370333 8530.293886422543 7957.023502240818 7886.111299443393 8817.772540092908 0.914729289373961 0.9047363338730825 1.0277718613704903 0.973268040155059 0.9344374252251311 0.8822889763142471 0.9819284042542453 0.9673978147697451 0.9023847537528994 0.894342790493471 1.0 13.106198546883109 -11.085393626933564 1.4198624908592072 0.9999090606123194 0.9398012628502982 0.0 0.05094337902657562 0.5347697846320327 1.9304053385844029 0.030236976084832338 0.006678322880876455 8.214977401312777e-12 11.085393626933564 -0.06010779776202124 VRYPPS(ph)PAK ddPTM_A549_MK2206_60min_R1 3 VRYPPSPAK 9 1 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 1 VRYPPS(1)PAK;VRYPPS(1)PAK;VRYPPS(1)PAK 120.57 3.841e-05 203893000.0 82606.0 91944.0 84723.0 78653.0 121950.0 92846.0 92388.0 86596.0 129726.0 135805.0 135954.0 True False 96547.87327720245 96623.55687542378 96737.99537020324 97922.98853086749 104011.316546188 102670.90209381301 109173.70371035756 98871.24818912757 100343.26812985365 105126.55617933147 102192.8696604842 0.9447613478118763 0.945501943496025 0.9466217720629265 0.9582174260904645 1.0177942638438986 1.0046777474291209 1.0683103828385074 0.9674965437178537 0.9819008749164645 1.0287073504109814 1.0 16.640935012548677 -6.623216328613417 5.5298755143328355 0.9978155553282715 0.9466771235480828 0.5312339918271418 0.026232296789281493 0.1429642829488507 6.613758671094962 0.003656312416035158 0.0077091639148215195 2.381133095699678e-07 6.623216328613417 -0.05113843178018873 VRYPPS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 VRYPPSPAK 9 1 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 1 VRYPPS(1)PAK;VRYPPS(1)PAK 125.28 2.1248e-05 183945000.0 89616.0 88739.0 92361.0 95283.0 106752.0 103173.0 98583.0 104757.0 109332.0 107165.0 113707.0 True False 98713.75034818765 96217.34695954766 98629.17287181156 101168.41450660623 99254.10779440711 102332.79329489903 102334.63001168771 102667.53945472314 104737.15625227154 100398.58361110662 99721.75984806109 0.9898917798742293 0.9648580922172568 0.9890436452594276 1.0145069106356457 0.9953104312001061 1.026183186606576 1.0262016050218896 1.0295399881746004 1.0502939018710866 1.0067871221293803 1.0 16.605620722684392 -6.496662654490584 1.0086941468858361 1.024959893491552 0.9756178113747559 0.5512054084333061 0.015289965372230372 0.40611868210145735 0.7413649300004467 0.0031356556691126236 0.013399689368899572 3.1866718613262587e-07 6.496662654490584 -0.04934208211679614 VRYS(ph)LDPENPTK ddPTM_A549_PD325901_60min_R1 1 VRYSLDPENPTK 12 1 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3KSJ0;A0A087WY81 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 VRY(0.21)S(0.79)LDPENPTK 45.864 0.012345 11499000.0 1281.8 1100.3 1082.7 1017.5 877.2 1160.7 1041.2 1037.5 1499.3 1247.0 1603.7 True False 1411.9273923887129 1193.0261425031858 1156.1785328040028 1080.3486640898366 815.5884981757155 1151.2476440288588 1080.8234357665024 1016.8062485969948 1436.2896349561963 1168.2642071856492 1406.455066691896 1.00389086422056 0.8482504494859452 0.8220515252744154 0.7681359253309884 0.5798894806458695 0.8185456267271253 0.7684734915198482 0.7229567959029157 1.021212599656293 0.8306445295358832 1.0 10.457847746951192 -8.769778417820126 24.99613403586511 1.01001708133541 0.7867309643011334 0.2503317430982449 0.11001349526154204 103.61014761178672 310568.88034364145 0.01682977268574571 0.018061385732696358 1.699110337531375e-09 8.769778417820126 -0.22328611703427648 VRYS(ph)QLLGLHEQLR ddPTM_A549_MK2206_60min_R1 2 VRYSQLLGLHEQLR 14 1 Q15036;F8WAZ0 Q15036 SNX17 Sorting nexin-17 1 VRY(0.049)S(0.951)QLLGLHEQLR;VRY(0.002)S(0.998)QLLGLHEQLR 70.96 0.00088927 6532900.0 349.89 321.22 411.21000000000004 260.81 649.9300000000001 508.90999999999997 502.08000000000004 443.03000000000003 848.4000000000001 657.77 502.14 True False 408.94287801080213 337.56872595844885 469.52576131842943 324.7084617082057 554.3261579570649 562.7625184128821 593.3014369712125 505.83085922247255 656.238754616406 509.17930015889505 377.4447796410225 1.0834508782973145 0.8943526157111017 1.2439588163465467 0.8602807065368002 1.4686284931116798 1.4909797373488918 1.5718893702424113 1.3401453312019698 1.7386351329074863 1.349016671109246 1.0 8.560121782648556 -6.770150342219678 24.998811357766176 1.3906418523695445 1.0274600249670298 0.48899117171900097 0.1960186900599939 190.15761828245994 545717.64799822 0.04049646821765182 0.07737423621929343 1.6976558634301117e-07 6.770150342219678 -0.3631818274025147 VRYS(ph)QLLGLHEQLR ddPTM_A549_PD325901_60min_R1 2 VRYSQLLGLHEQLR 14 1 Q15036;F8WAZ0 Q15036 SNX17 Sorting nexin-17 1 VRY(0.006)S(0.994)QLLGLHEQLR;VRY(0.006)S(0.994)QLLGLHEQLR 88.385 3.2305e-05 6167400.0 391.39 489.84000000000003 447.35 499.69000000000005 643.9200000000001 605.74 454.42 512.2 687.34 561.31 549.12 True False 431.1236246739106 531.1205358936297 477.7098611340824 530.5547164216713 598.6932806034047 600.807054272457 471.7132017681653 501.98376918687336 658.453490089236 525.8687908062363 481.5817211584799 0.8952242282718109 1.102866891658555 0.9919601183884565 1.101691972746356 1.2431810724942058 1.2475703040123114 0.979508110551673 1.042364664463001 1.367272596030593 1.0919616914471353 1.0 8.911636824201096 -6.4374217533074285 4.099027639889553 1.1622579599633005 1.0085419794385264 0.19385575474979033 0.11957868555509663 0.32799631152208464 10.028014588056964 0.021635477794174955 0.05174056899209382 3.652399264834023e-07 6.4374217533074285 -0.1537159805247741 VS(ph)DFGGR ddPTM_A549_MK2206_60min_R1 2 VSDFGGR 7 0 I3L4R8;P27694 I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed 1 VS(1)DFGGR;VS(1)DFGGR 112.41 0.007834899999999999 46841000.0 3454.2 3135.1 3404.2 3073.2 3880.7000000000003 2819.0 3452.1 3508.1 4346.6 4379.1 4469.6 True False 4037.1845129180956 3294.663198905214 3886.966748571765 3826.1341379611913 3309.854170732203 3117.304708899244 4079.3018852938258 4005.3839181056715 3362.102040093903 3389.858268582967 3359.6749653154775 1.2016592541234117 0.9806493880862196 1.1569472608808675 1.1388405656682068 0.9851709480537215 0.9278590164470047 1.2141953990810461 1.1921938757339168 1.0007224135678248 1.0089839950528237 1.0 11.714105949627411 -8.909844097168591 24.999649790045826 1.000312540470781 1.0934112469987591 0.17500929543197508 0.09248053431230836 24.63139662046228 6822.72976803154 0.015957921278641148 0.016988469000219147 1.2307104914039218e-09 8.909844097168591 0.09309870652797803 VS(ph)DFGGR ddPTM_A549_PD325901_60min_R1 2 VSDFGGR 7 0 I3L4R8;P27694 I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed 1 VS(1)DFGGR;VS(1)DFGGR 111.17 0.0081874 62571000.0 6308.6 7162.0 6691.299999999999 6134.6 7324.799999999999 6831.1 6289.8 7191.2 6899.5 6528.9 7343.1 True False 6949.044427854139 7765.566875041188 7145.411856055624 6513.520309312544 6810.331317188193 6775.469786443984 6529.161780910629 7047.765874612736 6609.538008657551 6116.664139770953 6439.945251746122 1.0790533391522203 1.2058436169058484 1.1095454350513652 1.0114247955052835 1.0575138531405441 1.0521005259488638 1.0138536160909624 1.0943828866715615 1.0263345029005402 0.9498006428101985 1.0 12.652832708192957 -2.3621038908086227 0.19956069782637736 0.998297420463278 1.6271894263828506 0.4757939138897984 0.04701136815242666 25.111201135550086 0.31655765088397025 0.03453397611070529 4.848240415495276 0.004344062941850661 2.3621038908086227 0.6288920059195726 VS(ph)DSESEGPQK ddPTM_A549_MK2206_60min_R1 2 VSDSESEGPQK 11 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 1 VS(0.783)DS(0.104)ES(0.114)EGPQK;VS(1)DSESEGPQK 138.45 1.9537e-08 11549100.0 5650.4 6021.4 5256.4 4136.9 6197.299999999999 4693.1 5114.3 5349.0 6765.8 7072.0 6320.799999999999 True False 6604.049380983276 6327.863540521146 6001.836559894433 5150.440685712496 5285.685379513667 5189.72072697235 6043.502109428525 6107.237130625472 5233.3571027624685 5474.4302882826905 4751.170914794627 1.3899835428818164 1.3318534849623849 1.2632331413726603 1.0840360782801113 1.1125016283995637 1.0923035226563051 1.2720026742480932 1.2854172666380415 1.1014878640687007 1.1522276058804606 1.0 12.21406739069341 -2.000000000000001 0.09748810206170296 0.8899305845027475 2.163759844133228 0.3390485047543358 0.09602090551546018 67.46066504626397 0.4533779976087575 0.680763445347707 11.533050934651442 0.00999999999999998 2.000000000000001 1.2738292596304803 VS(ph)EGGPAEIAGLQIGDK ddPTM_A549_MK2206_60min_R1 2 VSEGGPAEIAGLQIGDK 17 0 O14907 O14907 TAX1BP3 Tax1-binding protein 3 1 VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK 179.46 1.1354999999999999e-30 5997400.0 2168.97 2842.2 1784.1799999999998 2428.3999999999996 3839.1000000000004 2927.1 2876.3 3295.6 3524.2 3409.0 3622.9 True False 2535.039109774756 2986.855839982265 2037.2035525135934 3023.3581090150196 3274.37347562502 3236.8437791482716 3398.886478569747 3762.7613923517156 2725.9743269909673 2638.904532346677 2723.2339430466814 0.9308928879384567 1.0968047191129862 0.7480824619255533 1.1102087342641476 1.2023842035259513 1.1886029062662817 1.248106681120155 1.3817253570738175 1.001006297659914 0.9690333579620197 1.0 11.41110520901068 -5.249794832519888 22.04302046815433 1.0597651363092822 0.9308924904826498 0.04015087112972937 0.16303641665223542 941.7258490261682 1782489.579087174 0.02345530280432079 0.45064053103997875 5.626070467549242e-06 5.249794832519888 -0.12887264582663238 VS(ph)EGGPAEIAGLQIGDK ddPTM_A549_PD325901_60min_R1 1 VSEGGPAEIAGLQIGDK 17 0 O14907 O14907 TAX1BP3 Tax1-binding protein 3 1 VS(1)EGGPAEIAGLQIGDK 167.28 5.9701e-24 4890500.0 1406.1 1357.3 1866.3 1559.4 1807.7 1639.3 1704.3 1664.3 1436.9 1488.8 1647.1 True False 1548.8462368838887 1471.6844344447647 1992.9583409735958 1655.7205963456427 1680.7333882264488 1625.9500843081837 1769.1580691287447 1631.1042308819078 1376.5120899543506 1394.7969139198026 1444.5171418271625 1.072224200070593 1.018807179112626 1.3796709525043869 1.146210417587243 1.1635260943324615 1.1256011003452182 1.224740100273885 1.1291691760879572 0.9529219488618926 0.9655800360773366 1.0 10.496371608870813 -8.686608248655443 5.073581119756673 0.9777972964204411 1.1631548985721334 0.4739237542021494 0.08691584433115963 0.12634619787433563 5.9257815003849625 0.01458014601599498 0.016443942704853994 2.0577459298623056e-09 8.686608248655443 0.18535760215169228 VS(ph)FRDPLVSEGGPR ddPTM_A549_MK2206_60min_R1 2 VSFRDPLVSEGGPR 14 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 VS(1)FRDPLVSEGGPR;VS(1)FRDPLVSEGGPR 62.765 0.0016524999999999999 13264600.0 609.58 774.51 600.88 655.66 1201.6 683.77 600.5699999999999 524.06 1020.5699999999999 1007.46 904.22 True False 712.4622011998772 813.9292508003173 686.0938193648441 816.2967294336958 1024.8462317498943 756.1260875502082 709.6857950960025 598.3471098664395 789.4125245153991 779.8740862886419 679.6772187975575 1.0482361060450442 1.1975232188012275 1.0094406585800217 1.2010064584448437 1.50784255144374 1.1124781979421043 1.0441512168842944 0.8803400986794847 1.161452087377562 1.147418310809867 1.0 9.408705957611378 -7.5150734754271955 24.878891817898634 1.0590560986753141 1.1960218933370421 0.20201590010897164 0.13746220133709808 476.98457119410796 1520364.151345375 0.021539017378873246 0.03274832331108811 3.054404314921564e-08 7.5150734754271955 0.13696579466172798 VS(ph)FRDPLVSEGGPR ddPTM_A549_PD325901_60min_R1 1 VSFRDPLVSEGGPR 14 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 VS(1)FRDPLVSEGGPR 64.507 0.0014262 8342900.0 246.73 270.46 120.56 180.88 268.14 432.31 257.87 248.3 355.86 211.18 239.2 True False 271.77784796697387 293.25261337945255 128.74192658617403 192.0525467917147 249.30677143278194 428.78941069192365 267.68338396187846 243.34746171241827 340.904441736485 197.8460587597957 209.77991641373174 1.2955379743357733 1.397906045501012 0.6136999613073869 0.9154953919084665 1.1884205871313944 2.04399647984537 1.2760200715970753 1.1600131503174214 1.6250575725473506 0.9431124873250504 1.0 7.712732755787018 -7.002259738148355 24.924346795807207 1.3471915048068583 1.0489649526065885 0.13362740781669635 0.34065411745865515 144.08927277177315 1589308.9799708382 0.05229614940606431 0.09769688655288511 9.948102740275401e-08 7.002259738148355 -0.29822655220026983 VS(ph)GGTPIKIEDPNQFVPLNTNPNEVLEK ddPTM_A549_MK2206_60min_R1 2 VSGGTPIKIEDPNQFVPLNTNPNEVLEK 28 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 VS(0.529)GGT(0.471)PIKIEDPNQFVPLNTNPNEVLEK;VS(0.588)GGT(0.412)PIKIEDPNQFVPLNTNPNEVLEK 76.415 1.9988e-06 12291700.0 2323.0 2397.8 2263.65 2483.5 3243.0 2440.2 2595.8 2484.1000000000004 3218.6 3400.8999999999996 3205.3 True False 2715.0656081028146 2519.8377781681356 2584.6696082499498 3091.95761148855 2765.958995976122 2698.420344326336 3067.4232594205573 2836.2287822371914 2489.592239048047 2632.6343279723687 2409.3355482203547 1.1268939314444126 1.04586419273538 1.0727727859073448 1.2833237835105247 1.148017343627867 1.119985278231383 1.2731407469110296 1.1771829724307847 1.0333107154322998 1.0926806479558038 1.0 11.234419616404534 -8.82225584496989 5.372528736084368 1.014754095875902 1.1561346631228433 0.31113271667706643 0.07268415801231423 0.13415968453373478 7.631680056084404 0.01256584775234405 0.01339043770780077 1.505719778090073e-09 8.82225584496989 0.14138056724694126 VS(ph)GGTPIKIEDPNQFVPLNTNPNEVLEKR ddPTM_A549_PD325901_60min_R1 2 VSGGTPIKIEDPNQFVPLNTNPNEVLEKR 29 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 VS(0.588)GGT(0.412)PIKIEDPNQFVPLNTNPNEVLEKR;VS(0.521)GGT(0.479)PIKIEDPNQFVPLNTNPNEVLEKR 85.09700000000001 3.2204e-07 9433200.0 2371.6 2150.8999999999996 2431.0 2188.99 2917.1 2803.0 2792.0 2899.0 3071.5 3367.2 2735.3 True False 2612.363086120356 2332.163891584207 2595.982278790552 2324.1989407430087 2712.212959448677 2780.1732973316894 2898.2510878410244 2841.1771707784965 2942.4155364289713 3154.5944173500534 2398.875440495319 1.0889948856956726 0.9721904906836941 1.082166349685307 0.968870205392202 1.1306185030135039 1.1589485849909908 1.2081707282152985 1.1843787813309103 1.226581208327108 1.3150305197583305 1.0 11.228142533562698 -6.784290707803531 24.371715964141014 1.128390590375987 1.027930196875721 0.3194359238624652 0.08773087380198114 213.00926750427223 227181.06130926352 0.01364964041447711 0.025809201079134772 1.643271382881005e-07 6.784290707803531 -0.10046039350026592 VS(ph)GREENRVDATR ddPTM_A549_PD325901_60min_R1 2 VSGREENRVDATR 13 2 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 VS(0.999)GREENRVDAT(0.001)R;VS(1)GREENRVDATR 52.823 0.007637100000000001 7474600.0 1077.41 1191.37 821.31 1037.98 1207.6200000000001 1044.0900000000001 1120.88 1138.3200000000002 945.27 1186.6999999999998 1398.0700000000002 True False 1186.787870052679 1291.7709310133794 877.0490355382428 1102.0936671763825 1122.8009372628333 1035.587277206936 1163.5357017690715 1115.6153146052354 905.5435891649722 1111.7715594765114 1226.1162530959282 0.9679244256456551 1.0535468620953958 0.7153065896677456 0.8988492440203854 0.9157377487067601 0.844607739757214 0.9489603443647031 0.909877274514811 0.7385462731437463 0.9067423718340754 1.0 10.259880057992355 -5.716006258843702 24.999012819799663 0.8751977497140635 1.0107358731832452 0.28753930862183885 0.08216251849265215 154.07521389192976 84775.79076004167 0.013977445933831599 0.054133982686337796 1.92306401443455e-06 5.716006258843702 0.1355381234691817 VS(ph)GRRSPESCSKPEK ddPTM_A549_MK2206_60min_R1 1 VSGRRSPESCSKPEK 15 3 Q03111 Q03111 MLLT1 Protein ENL 1 VS(0.679)GRRS(0.321)PESCSKPEK 78.794 8.483799999999999e-05 9026700.0 935.64 1278.0 1105.1 845.47 1401.7 889.82 901.39 679.22 1223.3 1900.5 1234.9 True False 1093.5531577982429 1343.0447412206513 1261.8197972641617 1052.6101879545902 1195.5117868207622 983.9801617852876 1065.1608952188521 775.5015150240113 946.2245032086861 1471.1757300454256 928.2402484938436 1.1780928047158425 1.4468719099391205 1.3593676845101061 1.1339846442368215 1.2879335805149492 1.0600490157390687 1.147505612848802 0.8354534467583524 1.019374568969643 1.5849083601282592 1.0 9.858354443890862 -7.226944904402105 1.0063495500568083 0.9982615829536079 1.322690426372702 0.0380039546231401 0.20338165279979495 0.22394406487691218 0.4463961279917025 0.01585760058748485 0.036923347465983955 5.9300054922331396e-08 7.226944904402105 0.32442884341909406 VS(ph)GSFPEDSSK ddPTM_A549_PD325901_60min_R1 1 VSGSFPEDSSK 11 0 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 VS(0.595)GS(0.377)FPEDS(0.014)S(0.014)K 46.592 0.033768 9986800.0 8386.0 8901.3 8440.7 10072.0 10167.0 8803.3 9059.9 8787.6 10309.0 10216.0 10964.0 True False 9237.340546553087 9651.443790115063 9013.536660052416 10694.12456482834 9452.904994245893 8731.608843524808 9404.679452267503 8612.32442426116 9875.748580513184 9570.960016526531 9615.497506522379 0.9606721378989719 1.0037383696026443 0.9373968069710754 1.1121758970426967 0.9830905772513386 0.9080766582906383 0.9780751797697546 0.8956712243354286 1.0270657939242636 0.9953681554214291 1.0 13.23114578930205 VS(ph)IRLPS(ph)TSGSEGVPFR ddPTM_A549_PD325901_60min_R1 1 VSIRLPSTSGSEGVPFR 17 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 2 VS(0.999)IRLPS(0.294)T(0.266)S(0.241)GS(0.199)EGVPFR 49.089 0.0062325 1548600.0 179.08 269.5 0.0 361.24 230.47 301.63 311.65 276.28 156.31 288.84 405.11 True False 197.26006976827176 292.2117108103323 0.0 383.5529743644352 214.28258227833695 299.17362528510773 323.51001129142344 270.76937866253286 149.74083428266724 270.60259310625736 355.28403820387484 0.5552179342632804 0.8224735124257134 0.0 1.0795671438082974 0.6031303386485768 0.8420688607277963 0.9105672546588813 0.762120865410665 0.42146794727868 0.761651422547094 1.0 8.47282906414216 -6.288948956471406 24.999657103753442 0.7552977225787462 0.4955543712656902 0.2519485012703456 0.24997493171457855 1027.8974814921319 934112.3048920233 0.03918763418696383 0.09108339108488615 5.141040717464408e-07 6.288948956471406 -0.259743351313056 VS(ph)IRLPSTSGSEGVPFR ddPTM_A549_PD325901_60min_R1 2 VSIRLPSTSGSEGVPFR 17 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VS(1)IRLPSTSGSEGVPFR;VS(1)IRLPSTSGSEGVPFR 169.84 2.4463e-30 82140000.0 3140.5 3214.6 3502.7 3068.4 4727.6 3483.6 3826.1 3742.3999999999996 3478.0 3501.3 3416.5 True False 3459.321248086093 3485.505623639682 3740.414285446181 3257.9280991579885 4395.549685334602 3455.2307165838984 3971.7043292222534 3667.7548961439934 3331.831755070798 3280.227320464405 2996.2921589779016 1.154534025569169 1.163272951603178 1.2483476533617186 1.0873199028326184 1.466996358203606 1.1531688277562862 1.3255397399488191 1.2240978854996376 1.111984939481788 1.0947621748552583 1.0 11.548962587950912 -9.17848803746635 1.2127906586873998 1.030701045182413 1.230795075334933 0.3269062802887813 0.10031833167175122 0.2642916775627229 0.8060147555895086 0.02187621543604914 0.019396441007427774 6.629976095236615e-10 9.17848803746635 0.20009403015252003 VS(ph)ISEGDDKIEYR ddPTM_A549_PD325901_60min_R1 2 VSISEGDDKIEYR 13 1 M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087;M0R2U2;M0R1H0;M0R2B0 M0R0P1 FBL rRNA 2-O-methyltransferase fibrillarin 1 VS(0.545)IS(0.455)EGDDKIEYR;VS(0.579)IS(0.421)EGDDKIEYR 60.208999999999996 0.0022949999999999997 14138200.0 2288.3 2840.3 2768.1 3031.8999999999996 3363.9 2986.0 2953.3 2912.1000000000004 2945.6 3331.0 3609.0 True False 2520.6065314425737 3079.6620490337173 2955.959911937528 3219.173577055503 3127.631268824998 2961.6830060051448 3065.68944760777 2854.0158810017465 2821.8066755999266 3120.6800915279823 3165.1158793359414 0.7963710105841088 0.9730013580671325 0.9339183854961116 1.0170792159846302 0.9881569547719663 0.9357265638648662 0.9685867957071349 0.9017097603391806 0.8915334487506843 0.9859607706314747 1.0 11.628042604373507 -5.256738776734231 24.675263978874217 0.9523018266042594 0.7963709341597259 0.5901455338900077 0.03866929293575136 268.8207556119953 1411082.7308220835 0.00636335858774465 0.07069543469048982 5.536830432256385e-06 5.256738776734231 -0.1559308924445335 VS(ph)KNSETFPTILEEAK ddPTM_A549_MK2206_60min_R1 1 VSKNSETFPTILEEAK 16 1 A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;H9KV28;H7C2W8 A0A140T8Z0 DIAPH1 Protein diaphanous homolog 1 1 VS(0.476)KNS(0.476)ET(0.046)FPT(0.001)ILEEAK 76.061 0.00013277 2333800.0 1231.3 1661.8 1666.2 1374.2 2079.3 1627.6 1502.2 1555.3 2383.7 2129.4 2203.7 True False 1439.1133376052499 1746.3785218783069 1902.4922144616305 1710.8790616901822 1773.437724432055 1799.8315516865587 1775.1302952082453 1775.768537906488 1843.7957559867114 1648.3670610674706 1656.4604709740743 0.8687882160924647 1.0542832458002191 1.148528593225577 1.032852332832372 1.0706188016603817 1.0865526725356602 1.0716406013385806 1.0720259064571913 1.113093725021084 0.9951140337796021 1.0 10.693888060667723 -5.265199058567505 5.7037285710115775 1.064713223668412 0.8628380854928815 0.6352222427692555 0.0426855873423407 0.07098514319578961 9.71637010910084 0.0063954484002314484 0.05555214140788849 5.430013901440131e-06 5.265199058567505 -0.2018751381755305 VS(ph)KSPSPASTSTVPNMTDAPTAPK ddPTM_A549_MK2206_60min_R1 4 VSKSPSPASTSTVPNMTDAPTAPK 24 1 Q659A1 Q659A1 ICE2 Little elongation complex subunit 2 1 VS(0.407)KS(0.407)PS(0.073)PAS(0.073)T(0.014)S(0.014)T(0.014)VPNMTDAPTAPK;VS(0.382)KS(0.296)PS(0.064)PAS(0.064)T(0.064)S(0.064)T(0.064)VPNMTDAPTAPK;VS(0.429)KS(0.429)PS(0.08)PAS(0.016)T(0.016)S(0.016)T(0.016)VPNMTDAPTAPK;VS(0.492)KS(0.492)PS(0.014)PAS(0.001)TSTVPNMTDAPTAPK 100.41 3.8067000000000004e-11 35445000.0 2694.15 3366.17 2956.3199999999997 2818.23 3351.69 2453.25 2811.08 3184.2799999999997 4455.4400000000005 4023.39 4826.94 True False 3148.8566543565207 3537.493674925444 3375.5706298506802 3508.696476515154 2858.6608409568967 2712.851286664446 3321.8168487911007 3635.6614414485093 3446.2899538756687 3114.5034046342903 3628.2775812331947 0.8678654220513838 0.9749787869656613 0.9303507116738782 0.9670419084425737 0.7878837208440052 0.7476967310043545 0.915535477762996 1.002035086911075 0.9498418675850949 0.8583972242762417 1.0 11.825069118077971 -8.010196392619763 24.69417725560142 0.9766864205364743 0.8812891402775411 0.147371079283668 0.07458312457668713 418.24079530005037 1012919.8266719207 0.011222896228630212 0.015009357132804943 9.767954037146154e-09 8.010196392619763 -0.09539728025893313 VS(ph)KSPSPASTSTVPNMTDAPTAPK ddPTM_A549_PD325901_60min_R1 6 VSKSPSPASTSTVPNMTDAPTAPK 24 1 Q659A1 Q659A1 ICE2 Little elongation complex subunit 2 1 VS(0.562)KS(0.376)PS(0.06)PASTSTVPNMTDAPTAPK;VS(0.509)KS(0.353)PS(0.085)PAS(0.013)T(0.013)S(0.013)T(0.015)VPNMTDAPTAPK;VS(0.477)KS(0.419)PS(0.096)PAS(0.005)T(0.001)S(0.001)TVPNMTDAPTAPK;VS(0.556)KS(0.354)PS(0.07)PAS(0.012)T(0.002)S(0.002)T(0.003)VPNMTDAPTAPK;VS(0.579)KS(0.367)PS(0.054)PASTSTVPNMTDAPTAPK;VS(0.415)KS(0.324)PS(0.055)PAS(0.088)T(0.088)S(0.015)T(0.015)VPNMTDAPTAPK 142.45 3.4784e-28 50130600.0 5735.719999999999 5473.22 5647.960000000001 6070.8 6605.1900000000005 6226.549999999999 6767.56 6498.32 7013.030000000001 6454.030000000001 6630.879999999999 True False 6318.006071986106 5934.46745766726 6031.264529542529 6445.7795282128545 6141.264241068463 6175.843041206075 7025.10319915093 6368.705909766576 6718.296737568767 6046.521444348351 5815.323796611559 1.0864409778295487 1.0204878808511268 1.0371330540625774 1.108412833687549 1.0560485461956255 1.0619946983527524 1.2080330253053626 1.0951592950812916 1.1552747486706323 1.0397566250518164 1.0 12.505643807703722 -7.572385988609565 24.99998164047176 1.0884718892666179 1.0604808326726316 0.08775993725747844 0.05570887565890264 354.9750400757834 179252.85475160554 0.010794453909955861 0.016010762982976826 2.6767882138950783e-08 7.572385988609565 -0.027991056593986263 VS(ph)NAESSTPKEEPSSIEDRDPQILLEPEGVK ddPTM_A549_PD325901_60min_R1 1 VSNAESSTPKEEPSSIEDRDPQILLEPEGVK 31 2 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 VS(0.359)NAES(0.246)S(0.212)T(0.183)PKEEPSSIEDRDPQILLEPEGVK 91.87100000000001 7.8183e-10 23977000.0 1768.2 2000.6 1453.8 2173.8 2278.2 1798.5 2096.4 3021.4 2604.0 4465.5 3747.3 True False 1947.7063623199574 2169.1975831063105 1552.4636104095866 2308.0706889420007 2118.187091363333 1783.853612290774 2176.179649194099 2961.1358067575547 2494.562935653926 4183.547567913002 3286.405856091876 0.5926554563276395 0.6600516424608232 0.47238949733851293 0.702308476192502 0.6445299771593749 0.5427977220111501 0.6621761719296488 0.9010255995219271 0.7590550421609847 1.272985672222477 1.0 11.682294942191294 -9.53938453882145 0.27259832870088263 1.0796092030313125 0.5493242849379718 0.7071473839156104 0.119090542493314 0.8033014303090111 0.14978744256908327 0.15342607077920145 0.07103439616674324 2.888121510771402e-10 9.53938453882145 -0.5302849180933407 down VS(ph)NSPEPQKAVEQEDELSDVSQGGSK ddPTM_A549_MK2206_60min_R1 2 VSNSPEPQKAVEQEDELSDVSQGGSK 26 1 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.556)NS(0.443)PEPQKAVEQEDELS(0.001)DVSQGGSK;VS(0.614)NS(0.386)PEPQKAVEQEDELSDVSQGGSK 137.47 7.7135e-25 12678900.0 1658.88 1860.73 1894.7799999999997 2063.51 2652.66 1531.49 2266.81 1975.19 3211.32 3055.9700000000003 3587.7000000000003 True False 1938.8583882779162 1955.4332091795789 2163.4882955933285 2569.0700426344847 2262.457227957453 1693.5512552792138 2678.6600349360933 2255.1792312656826 2483.9611474242747 2365.6242545366604 2696.7750745172602 0.7189544306452714 0.7251005942828264 0.802250182463069 0.9526452787666634 0.8389491764946126 0.6279912890333912 0.9932827028281512 0.8362503986986656 0.9210857705175577 0.8772048795949814 1.0 11.397019482761145 -2.076016470099389 0.07267714242650412 1.1921958780781157 2.008417976644742e-12 0.2589616555481773 0.09839825148124791 121.35191837744215 0.6395355349216414 1.755028811629216 14.718582098437524 0.008394281516059383 2.076016470099389 -1.1921958780761073 VS(ph)PAGGTLDDKPK ddPTM_A549_PD325901_60min_R1 2 VSPAGGTLDDKPK 13 1 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 VS(0.972)PAGGT(0.028)LDDKPK;VS(0.982)PAGGT(0.018)LDDKPK 59.261 0.0027155 15452900.0 5809.9 6784.0 6408.1 6420.2 7717.8 6338.4 6535.200000000001 6395.700000000001 6718.5 7556.1 7681.0 True False 6399.716770977671 7355.711488450069 6842.992201035682 6816.761172667883 7175.728352964588 6286.78217188982 6783.900612198662 6268.132746170411 6436.1448092130995 7079.006556467904 6736.285693870707 0.950036423900596 1.0919536110445809 1.0158405554654646 1.011946565578476 1.0652351576320058 0.9332713096788804 1.007068423236752 0.9305028068915984 0.9554441574634069 1.0508768300770017 1.0 12.71773761077276 -7.2585602641875715 24.998058818857714 0.973918618592155 1.0291543142369273 0.20123162031908337 0.04627854523298187 234.9372212010776 2039851.5004808535 0.0056590505204682845 0.009530152005007758 5.5136568768468326e-08 7.2585602641875715 0.055235695644772265 VS(ph)PATPK ddPTM_A549_PD325901_60min_R1 1 VSPATPK 7 0 J3KNZ9;Q9HAH7;Q9HAH7-1 J3KNZ9 FBRS Probable fibrosin-1 1 VS(0.996)PAT(0.004)PK 109.48 0.008666 17024000.0 5244.0 4930.7 5112.0 4776.1 6281.6 4660.1 4505.2 4147.7 4381.7 5380.6 5186.6 True False 5776.36701957124 5346.227393293152 5458.931060953235 5071.108849689897 5840.402086343566 4622.149690651234 4676.647851340034 4064.970869692294 4197.552386772204 5040.8679977410575 4548.681080566308 1.2698993218605878 1.175335728885075 1.2001129479654795 1.1148525825113567 1.2839770436524953 1.016151629182976 1.0281327199043364 0.8936592382920386 0.9228064822362995 1.10820431427421 1.0 12.15123257187144 -7.425652740316517 3.8937952668698435 0.9622015077563136 1.2008969833158356 0.6898424925741617 0.070080544083391 0.07602468638869501 2.08530177441209 0.00852818116687915 0.013792181549300588 3.752729486740315e-08 7.425652740316517 0.23869547555952197 VS(ph)PCHSR ddPTM_A549_MK2206_60min_R1 1 VSPCHSR 7 0 A0A1B0GWK2;Q674X7-4;Q674X7-3;Q674X7-5;Q674X7-2;Q674X7 A0A1B0GWK2 KAZN Kazrin 1 VS(0.984)PCHS(0.016)R 50.805 0.051296 2191700.0 832.57 787.49 657.04 733.49 838.54 958.71 911.67 652.18 620.86 812.89 1107.7 True False 973.0874616178048 827.5698773582554 750.2181518364358 913.195082927617 715.1918768072213 1060.1600558598072 1077.308638152377 744.6285122174845 480.2362013096905 629.2575844233762 832.6275190352509 1.1686948117512403 0.9939256851817057 0.9010249297377282 1.0967630327492877 0.8589577697790965 1.2732704980591967 1.2938662409340413 0.8943116762226054 0.5767719542420731 0.7557492036204672 1.0 9.701527431317466 -8.511965368733966 24.29670582337032 0.7967422832065645 1.0739867556735165 0.42887230164437207 0.15710259628521336 340.86693760593204 758881.396939284 0.0325271064248652 0.03811974193199273 3.076342116901068e-09 8.511965368733966 0.27724447246695205 VS(ph)PDFTQESR ddPTM_A549_MK2206_60min_R1 2 VSPDFTQESR 10 0 D6RE87;E7EPB1;E7EQS8;Q6N021-2;Q6N021-3;Q6N021 D6RE87 TET2 Methylcytosine dioxygenase TET2 1 VS(0.996)PDFT(0.003)QES(0.001)R;VS(0.981)PDFT(0.018)QES(0.001)R 63.943999999999996 0.006293399999999999 4341800.0 1797.71 1833.12 1392.04 2006.92 2748.5 2025.21 1673.75 2027.21 2883.2 2232.4 2951.6 True False 2101.1194982102934 1926.4179781114235 1589.4522039486064 2498.615490094061 2344.1992909159344 2239.5163779744016 1977.8487096290771 2314.5732255702505 2230.159803524305 1728.0992895308646 2218.636259984152 0.9470319836137998 0.8682892337318892 0.7164095496933599 1.126194291132657 1.05659468980854 1.00941123985344 0.8914704700820157 1.0432414124462133 1.0051939760239181 0.7789015805336241 1.0 11.115457445242647 -6.264064153668243 24.99993722640824 1.0084811719228854 0.8463481568354722 0.27743048534279746 0.10061816498369297 137.18521363904193 1306641.0491579873 0.009804196964716795 0.023788098137044418 5.444222252429995e-07 6.264064153668243 -0.1621330150874133 VS(ph)PENLVDK ddPTM_A549_MK2206_60min_R1 2 VSPENLVDK 9 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 VS(1)PENLVDK;VS(1)PENLVDK 147.33 2.8428000000000003e-05 61558000.0 7572.2 8254.2 7282.3 6777.5 9759.2 7787.4 8597.7 7905.0 10333.4 9964.4 10235.0 True False 8850.202237484344 8674.30352346126 8315.039643124428 8437.987804253533 8323.634607934062 8611.457499142241 10159.790799568584 9025.557958047186 7992.901399048997 7713.43511942365 7693.367028370303 1.1503678694709427 1.1275041852902148 1.0808063117828157 1.0967873719188677 1.0819235033554964 1.1193353270923327 1.3205909404949767 1.173160974221593 1.0389341064288393 1.002608492611797 1.0 12.909399421471518 -8.86370495534949 4.998807325723507 1.0169225199195 1.1424200350964542 0.45940851084281464 0.06302669795980356 0.15196006526977482 6.091754215233412 0.012029583282366689 0.012742333809592814 1.3686583289561997e-09 8.86370495534949 0.12549751517695418 VS(ph)PENLVDK ddPTM_A549_PD325901_60min_R1 2 VSPENLVDK 9 0 O75376-2;O75376;A0A088AWL3;E7EVK1;J3KS29;J3QKP0 O75376-2 NCOR1 Nuclear receptor corepressor 1 1 VS(1)PENLVDK;VS(1)PENLVDK 131.69 4.8474e-05 106159000.0 7524.1 6559.6 7763.2 7619.299999999999 8605.6 7461.1 7883.3 9481.5 7824.3 7633.700000000001 7908.1 True False 8287.941093050336 7112.400512918205 8290.057435913952 8089.926856314194 8001.172343708318 7400.339275319823 8183.30329540728 9292.384044407147 7495.471880736187 7151.706879224611 6935.453833576223 1.1950106354866632 1.0255133526353157 1.1953157839188207 1.1664596218849999 1.1536624041778913 1.0670302842321546 1.1799232597858145 1.3398379208322966 1.08074713790881 1.0311808067413635 1.0 12.75977457557826 -9.057717813878556 4.269288341180793 1.03281648661106 1.1609459686489456 0.3614814117136509 0.07652232379685506 0.15806831683812456 6.034171014386639 0.014373006416246193 0.014319882656641603 8.755524872898402e-10 9.057717813878556 0.12812948203788554 VS(ph)PFGLR ddPTM_A549_MK2206_60min_R1 2 VSPFGLR 7 0 J3KNZ9;H3BRE6 J3KNZ9 FBRS 1 VS(1)PFGLR;VS(1)PFGLR 133.05 0.0056341 33162000.0 7081.1 6414.4 5535.1 5788.700000000001 8490.0 7294.299999999999 6316.6 6505.5 8718.8 8237.1 8949.0 True False 8276.216563726577 6740.86556188243 6320.0604106749315 7206.931759864621 7241.132246634989 8066.177984435529 7464.244456605243 7427.674547258182 6744.005721062604 6376.333389085596 6726.716320164718 1.2303501693563192 1.0021034396344761 0.9395461485017955 1.0713892807193843 1.076473557377201 1.1991256358255362 1.1096416291898072 1.104205111934362 1.0025702586633625 0.9479117426092761 1.0 12.715686702617115 -8.769633876722303 24.001326523802643 1.00121371783145 1.0865594877367144 0.2692125551661829 0.07752599274522481 130.55392204028033 382385.43577437405 0.013374149086022262 0.014363702539321559 1.699675926450643e-09 8.769633876722303 0.08534576990526443 VS(ph)PFGLR ddPTM_A549_PD325901_60min_R1 3 VSPFGLR 7 0 J3KNZ9;H3BRE6 J3KNZ9 FBRS 1 VS(1)PFGLR;VS(1)PFGLR;VS(1)PFGLR 148.99 0.0033753 64626300.0 7372.8 7704.84 7785.14 7124.540000000001 8701.49 6741.24 6552.349999999999 6077.300000000001 6431.299999999999 6993.8099999999995 6853.1 True False 8121.281228431509 8354.153906938333 8313.486416249892 7564.606654795685 8090.327360910863 6686.341576490998 6801.703264833501 5956.083483950379 6161.014826448197 6552.219643028918 6010.212145380203 1.3512470162428452 1.3899931824136722 1.3832267838731982 1.2586255645918056 1.34609680410858 1.112496766296429 1.131691045225697 0.9909938850542188 1.0250910745611383 1.0901810925368638 1.0 12.553200200005588 -7.419805054318048 0.9882537628379827 1.008433514394115 1.3720034924948687 0.8961297745163409 0.0490385334683488 0.08008856735184472 0.15568853826716617 0.006645721804293631 0.013855006388109126 3.803600936730186e-08 7.419805054318048 0.36356997810075375 VS(ph)PGGR ddPTM_A549_MK2206_60min_R1 1 VSPGGR 6 0 G3V538;G3V3N9;G3V500;F8W717;A0A3B3IU69;O00423;O00423-3;H0YJS9 G3V538 EML1 Echinoderm microtubule-associated protein-like 1 1 VS(1)PGGR 85.272 0.040016 10014000.0 2898.7 1843.4 1363.0 1276.2 2315.8 1846.7 1609.9 1854.8 2019.2 2726.5 2912.1 True False 3387.9296935891625 1937.2211862019922 1556.293895277399 1588.8690572907956 1975.1488877217093 2042.1165682597502 1902.3979911168644 2117.7235800867697 1561.8544239998178 2110.5817563635105 2188.9452001286913 1.5477453219888653 0.8850021398836755 0.7109789204343271 0.7258605913009534 0.9023290704607806 0.9329226552312462 0.8690934752523817 0.9674630410858461 0.7135191981544325 0.9642003629142595 1.0 11.09602012200772 -5.263049491119224 5.800389592960119 0.8576190713042153 1.568215206771562 0.7910611864856171 0.10053208505634487 0.0513414610441752 7.583810878591342 0.016251668866353233 0.14373901234623424 5.456956714260809e-06 5.263049491119224 0.7105961354673467 VS(ph)PGLPSPNLENGAPAVGPVQPR ddPTM_A549_MK2206_60min_R1 1 VSPGLPSPNLENGAPAVGPVQPR 23 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 VS(0.832)PGLPS(0.168)PNLENGAPAVGPVQPR 137.05 1.9329999999999999e-22 18612000.0 705.1 919.78 844.12 874.13 1080.7 1106.9 1069.4 903.07 1125.5 1483.6 1552.5 True False 824.1036419600924 966.5928733019799 963.8289089373134 1088.2918892411874 921.730461594634 1224.031423299246 1263.696137462187 1031.0829380358844 870.5760470541779 1148.4537295950504 1166.9714031797657 0.706190091474884 0.8282918250337634 0.8259233313781903 0.9325780274270713 0.7898483708196287 1.048895816953186 1.082885265242032 0.8835545885926491 0.7460131796563573 0.984131853159162 1.0 10.18855349266859 -5.095456751073965 0.974056242143023 0.9011323540779084 0.5593639754655493 0.291603773268009 0.10074312463324624 3.4121035669112674 1.9952239286772502 0.018285774384789007 1.3155649970961785 8.026814913930778e-06 5.095456751073965 -0.3417683786123591 VS(ph)PGLPSPNLENGAPAVGPVQPR ddPTM_A549_PD325901_60min_R1 3 VSPGLPSPNLENGAPAVGPVQPR 23 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 VS(0.946)PGLPS(0.054)PNLENGAPAVGPVQPR;VS(1)PGLPSPNLENGAPAVGPVQPR;VS(0.932)PGLPS(0.068)PNLENGAPAVGPVQPR 392.2 0.0 38119000.0 8820.5 9503.6 10793.2 9594.4 11297.3 11198.599999999999 10395.9 11230.4 9765.6 10346.4 10544.0 True False 9715.95066669109 10304.501724887103 11525.691456784125 10187.02429753664 10503.816621569204 11107.40231448399 10791.521663354764 11006.400861921635 9355.18579278879 9693.126538272329 9247.15484392302 1.050696222857796 1.1143429410246053 1.2464040725303198 1.1016387710033078 1.1358971271549572 1.201169711328396 1.1670099447341538 1.1902472758044864 1.0116826148895697 1.0482279903253042 1.0 13.174793831484326 -8.772186603377296 24.54949565308267 1.0055167662328421 1.152956023464745 0.5555154273848852 0.05170761841855061 73.44427965824097 167765.63400807223 0.008494680788319388 0.009088869631961968 1.6897147556456243e-09 8.772186603377296 0.14743925723190276 VS(ph)PGQAAPAMAR ddPTM_A549_PD325901_60min_R1 2 VSPGQAAPAMAR 12 0 Q96HA7;Q96HA7-2 Q96HA7 TONSL Tonsoku-like protein 1 VS(1)PGQAAPAMAR;VS(1)PGQAAPAMAR 49.269 0.011197 36783000.0 11056.7 10925.7 11422.3 10291.8 13030.6 10867.2 11640.1 12320.4 12062.8 12704.2 11610.1 True False 12179.16804448767 11846.447082747489 12197.48596586974 10927.501111626327 12115.375609129584 10778.70112620868 12083.07037520713 12074.65995683317 11555.842465516973 11902.054643887666 10182.13130248773 1.1961315055436397 1.1634545588557796 1.197930531782635 1.0732037121694242 1.1898663697422087 1.0585898773054707 1.186693631838646 1.1858676340073369 1.134913911657534 1.1689158478028778 1.0 13.313751954489563 -10.437447995912601 0.588945083637905 0.9864916984900188 1.156410361904779 0.0 0.06766549164559707 0.5014261571879252 0.2852851493819598 0.04363993511870187 0.009938480501856545 3.652178572239413e-11 10.437447995912601 0.16991866341476014 VS(ph)PGQAAPAMARPR ddPTM_A549_MK2206_60min_R1 1 VSPGQAAPAMARPR 14 1 Q96HA7;Q96HA7-2 Q96HA7 TONSL Tonsoku-like protein 1 VS(1)PGQAAPAMARPR 80.545 0.00014166 4325400.0 1300.6 1457.1 1227.5 1443.5 1642.4 1698.1 1370.6 1355.4 2029.6 2125.6 1915.7 True False 1520.1094833829195 1531.2601662226987 1401.5779577791686 1797.1575648011778 1400.8051356741232 1877.7918148924477 1619.6202786662366 1547.532100738413 1569.898840605206 1645.425483706687 1439.978819369712 1.0556471129542595 1.0633907566035874 0.9733323427581028 1.248044443867449 0.972795652846661 1.3040412745198358 1.1247528483614466 1.0746908773392776 1.0902235640468385 1.1426733932287283 1.0 10.491831875902584 -10.257109830027002 0.7561592410025659 1.0022332119990351 1.1031462013225681 0.0 0.10398054297432345 0.979927335125192 1.061690543484723 0.053169326350128145 0.01830136235951874 5.532101885492317e-11 10.257109830027002 0.10091298932353299 VS(ph)PQPMISR ddPTM_A549_MK2206_60min_R1 1 VSPQPMISR 9 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 VS(1)PQPMISR 64.10300000000001 0.0064257 1744000.0 822.87 638.34 574.58 880.45 904.72 744.9 586.89 726.06 1269.1 902.33 1066.1 True False 961.7503387600352 670.8287794294129 656.0640838947085 1096.160289524903 771.6368864753365 823.7248235753983 693.5203161727911 828.9812284654954 981.6508763362573 698.4930263045981 801.3579471368427 1.200150746861943 0.837115026844377 0.8186904319583377 1.3678784785767137 0.962911629231736 1.027911218099814 0.8654313826307674 1.0344705901118814 1.2249842655751777 0.87163673711633 1.0 9.64630299321828 -8.53922601946353 24.576705637662513 1.1074786234382814 1.0055241121470517 0.0 0.17460924236900943 417.34828355327494 627443.5689213307 0.02785963156165924 0.031594318190135695 2.889175879985017e-09 8.53922601946353 -0.10195451129122968 VS(ph)PSDTTPLVSR ddPTM_A549_MK2206_60min_R1 2 VSPSDTTPLVSR 12 0 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 VS(0.966)PS(0.033)DT(0.001)TPLVSR;VS(0.935)PS(0.061)DT(0.003)T(0.001)PLVSR 138.89 1.193e-08 56270000.0 2599.4 2520.3999999999996 2442.7 2098.1800000000003 3520.7 2675.9 2231.83 2713.2 3646.1 3766.5 2918.5 True False 3038.115170771611 2648.6775945011955 2789.1115906046234 2612.2341941908808 3002.8096938430895 2959.0619618813366 2637.3246217245496 3097.804408826516 2820.2641716252683 2915.6450340521405 2193.755903497678 1.384892077522255 1.2073711529519762 1.2713864774826238 1.1907588214468117 1.3687984561342823 1.3488565237196495 1.202196022592876 1.4121007737859268 1.2855870460011978 1.3290653848058016 1.0 11.099187292442984 -10.500181085748144 0.7709806395915901 0.9948129490739763 1.2945826072216844 0.0 0.12019385482972383 0.2962493227125086 0.3100198734681397 0.05189877363448705 0.01401320789997546 3.1609593748340043e-11 10.500181085748144 0.29976965814770806 VS(ph)PSDTTPLVSR ddPTM_A549_PD325901_60min_R1 2 VSPSDTTPLVSR 12 0 Q9HCK8;H0YJG4;Q9HCK8-2 Q9HCK8 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 VS(0.973)PS(0.027)DTTPLVSR;VS(0.82)PS(0.179)DTTPLVSR 156.46 8.7697e-14 96225000.0 16724.4 16941.4 16646.7 16046.6 18993.0 18658.699999999997 17276.5 16621.0 17575.1 22105.0 22684.0 True False 18422.24877614744 18369.11123384847 17776.44516673907 17037.76203752724 17658.997202292932 18506.74973347227 17933.96666156356 16289.481116077744 16836.479666056584 20709.28652753711 19894.01180572363 0.9260197971153936 0.9233487651074764 0.8935575860885274 0.856426657624953 0.8876539018244842 0.9302673545286508 0.9014756217448232 0.8188132828689265 0.8463089210197727 1.0409809107270622 1.0 14.280046617440622 -10.879602729560025 1.1498447993817211 0.9994799901519312 0.8842479460190726 0.6530640644268483 0.03646761012256217 0.2812747316813332 0.665143064399015 0.025431230883595304 0.0062437065384946385 1.3194631642847175e-11 10.879602729560025 -0.11523204413285859 VS(ph)PSFSAELK ddPTM_A549_PD325901_60min_R1 1 VSPSFSAELK 10 0 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VS(0.965)PS(0.034)FS(0.002)AELK 86.911 0.00073575 7945900.0 1661.4 1680.4 1211.2 1747.0 1895.7 1301.9 1297.1 1853.7 1432.1 1683.9 1952.6 True False 1830.064104941963 1822.013205364312 1293.3993155372755 1854.9082222751306 1762.5525718099684 1291.2977580435688 1346.4618503003553 1816.7264993004815 1371.9138172619 1577.5782666238285 1712.4425785512221 1.0686864061101846 1.0639849932403513 0.7552949989316022 1.08319440634584 1.0292622911193559 0.7540677709240595 0.786281459691047 1.0608977620945905 0.8011444205169088 0.9212444763891044 1.0 10.741839897244276 -5.619199991670169 17.060847641999242 0.909022540628843 1.0675100393727253 0.20946771828578736 0.11702112939521414 1.6760303877692393 289.8008978537124 0.016503775827429124 0.06392086188652205 2.4032558510280376e-06 5.619199991670169 0.15848749874388224 VS(ph)PSKSPSLS(ph)PSPPSPLEK ddPTM_A549_PD325901_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.684)PS(0.053)KS(0.26)PS(0.008)LS(0.687)PS(0.246)PPS(0.061)PLEK 122.34 7.740699999999999e-15 17967000.0 5305.0 5416.3 5600.8 6178.4 7363.7 6258.9 6239.5 5352.9 4635.5 4133.4 4924.4 True False 5843.559694665411 5872.750609506504 5980.903968346409 6560.025735835527 6846.499115385901 6207.92959353168 6476.947586885411 5246.132210231184 4440.686055385477 3872.416418589543 4318.73001834356 1.353073628090949 1.3598327713384095 1.3848756331011338 1.518971018788438 1.5853038014198122 1.4374433148550274 1.4997343106364474 1.2147395618500199 1.0282388657137436 0.8966562860242883 1.0 12.076391415198389 -8.522814913459712 2.619667090528178 1.0120859932749664 1.450327942165819 0.8817138877090279 0.07588405877299978 0.06316646699041484 0.870132583322583 0.012743703871420136 0.014957434299846747 3.000440967001369e-09 8.522814913459712 0.43824194889085266 VS(ph)PSPSQESLSSSK ddPTM_A549_MK2206_60min_R1 1 VSPSPSQESLSSSK 14 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VS(0.865)PS(0.135)PSQESLSSSK 90.70700000000001 4.7259e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VS(ph)PSPSQESLSSSK ddPTM_A549_PD325901_60min_R1 1 VSPSPSQESLSSSK 14 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VS(0.95)PS(0.049)PS(0.001)QESLSSSK 70.197 0.0024646 8569600.0 6471.2 7682.4 7062.7 8976.0 10710.0 7084.5 5849.1 6195.3 8261.9 7589.6 6971.3 True False 7128.1514601543495 8329.822809385149 7542.017293465256 9530.427134024942 9957.766547494202 7026.806180858492 6071.690701250329 6071.729881381168 7914.68107453118 7110.391360750762 6113.874294711742 1.1658976152519063 1.3624458743926275 1.2335905074117735 1.5588196084221722 1.6287162717930388 1.1493213373615483 0.9931003498881389 0.9931067582846728 1.2945442927043926 1.162992730632517 1.0 12.577871174430255 -7.4834077390523 22.151376080028218 1.1173032026181942 1.3890654905048072 0.49036080060590403 0.14741623696844433 115.08223671694479 64584.519857868865 0.025345044923067182 0.040508235891023245 3.285430321389912e-08 7.4834077390523 0.27176228788661305 VS(ph)PSPTTYR ddPTM_A549_MK2206_60min_R1 2 VSPSPTTYR 9 0 P11274-2;P11274 P11274-2 BCR Breakpoint cluster region protein 1 VS(0.975)PS(0.023)PT(0.002)TYR;VS(0.765)PS(0.152)PT(0.041)T(0.041)YR 101.66 0.00072428 24864000.0 3897.3 4386.1 3817.3999999999996 4334.200000000001 6138.5 4328.2 4183.1 4187.3 6994.0 6180.299999999999 5700.3 True False 4555.068960163192 4609.3337554521895 4358.7647218136 5396.079194569632 5235.534781621782 4786.207251173363 4943.115123076561 4780.862598068436 5409.870167122984 4784.165937595237 4284.758189723423 1.0630865870302981 1.07575119793393 1.0172720440251855 1.2593660962038895 1.2218973743206103 1.1170308893166052 1.1536508956169669 1.1157835253188548 1.2625847078367298 1.1165544765325601 1.0 12.06499807282003 -6.205945206578406 24.998722154873803 1.1417515492808004 1.054408053720166 0.27104334310246003 0.07318879780822082 498.6018127633092 224606.58205042154 0.01416780582369807 0.03748444660321375 6.223788035809869e-07 6.205945206578406 -0.08734349556063425 VS(ph)PSTSYTPSR ddPTM_A549_MK2206_60min_R1 2 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VS(0.994)PS(0.006)T(0.001)SYTPSR;VS(0.971)PS(0.013)T(0.013)S(0.002)YTPSR 147.63 1.6212e-11 281260000.0 7225.0 7775.7 6704.7 6245.299999999999 8487.4 6542.0 5929.1 7384.799999999999 9681.9 9869.9 9712.9 True False 8444.403365709355 8171.449917300006 7655.527277818317 7775.398780362166 7238.914703190797 7234.270097771857 7006.340722486489 8431.6180150015 7488.9651088172795 7640.282735056744 7300.91886759726 1.1566219977032037 1.1192358202426154 1.048570380886558 1.0649890680022114 0.9915073478378662 0.9908711805960203 0.959651908142938 1.1548708002252264 1.0257565170398757 1.0464823501827474 1.0 12.833862332531698 -5.6663009405765905 1.176244438655242 1.0174765509630552 1.1793445525942847 0.4185733283550669 0.0490732037929514 0.5577568477953521 0.9869431643081599 0.007079674688254634 0.09210829683008315 2.1562497368878017e-06 5.6663009405765905 0.1618680016312295 VS(ph)PSTSYTPSR ddPTM_A549_PD325901_60min_R1 2 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VS(0.937)PS(0.026)T(0.026)S(0.011)YTPSR;VS(0.951)PS(0.044)T(0.005)SYTPSR 148.1 1.5038e-11 287080000.0 16997.5 17640.6 16912.1 17742.199999999997 19926.3 19273.6 18272.7 18519.6 18659.1 18881.1 20508.1 True False 18723.073687101856 19127.235271691083 18059.856806718934 18838.095398540245 18526.745430003153 19116.64219174172 18968.077597705113 18150.21204965485 17874.922915768126 17688.944123731304 17985.733711557074 1.040995824099797 1.063467055525264 1.004121216089963 1.0473909878047105 1.0300800471708553 1.0628780842817638 1.0546179489756826 1.0091449334642426 0.9938389616144632 0.9834986110333068 1.0 14.13456539364792 -8.411577599370643 4.36400540086677 0.9972523783735388 1.0429106980317056 0.663716893425792 0.016176676699118653 0.10275681195975968 3.2596570748548053 0.0025153577916330228 0.0030419061819566026 3.876344801211627e-09 8.411577599370643 0.0456583196581668 VS(ph)PTGAAGR ddPTM_A549_MK2206_60min_R1 2 VSPTGAAGR 9 0 A0A0G2JMS7;A0A0G2JNZ2;A0A669KB89;Q14160-2;Q14160;H0YCG0;A0A0G2JPP5;Q14160-3 A0A0G2JMS7;A0A0G2JPP5 SCRIB Protein scribble homolog 1 VS(0.815)PT(0.185)GAAGR;VS(0.99)PT(0.01)GAAGR 96.95700000000001 0.00087658 30667000.0 7422.5 7789.4 6458.0 5290.3 8649.6 6858.0 5486.200000000001 6453.8 8157.0 10072.6 11033.1 True False 8675.236537297951 8185.847188782579 7373.84150821822 6586.423737490591 7377.255298055834 7583.7090080280295 6482.971525476952 7368.645913933573 6309.452524052357 7797.192664275488 8293.276771930869 1.0460565559152506 0.9870461837820376 0.8891348632154016 0.7941883429940223 0.8895464966302139 0.9144406025005198 0.7817141165985184 0.8885083805321958 0.7607912647274847 0.9401823764842373 1.0 13.017726524931884 -5.663324788719159 2.984426943093665 0.8734966884615757 1.0368022581031193 0.4134595813359482 0.06758066413858914 0.25271822744748323 4.282218791556215 0.012429194692463019 0.06381366584600959 2.171076923756561e-06 5.663324788719159 0.16330556964154364 VS(ph)PTSPR ddPTM_A549_MK2206_60min_R1 2 VSPTSPR 7 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 VS(0.805)PT(0.111)S(0.084)PR;VS(0.525)PT(0.467)S(0.008)PR 87.696 0.012878 39513000.0 2482.54 2371.9300000000003 2729.9 2236.39 3187.6 2326.8 2170.82 2157.0299999999997 3227.1 3353.2 3485.4 True False 2901.5320597243062 2492.6511056678373 3117.040869198657 2784.305650395363 2718.7082625881853 2573.020431595164 2565.229894450781 2462.7956081273273 2496.1670026197576 2595.709791101459 2619.8789878536277 1.1075061379462519 0.951437496626505 1.1897652081069348 1.0627611669485713 1.0377228395634888 0.9821142287580035 0.9791406039530022 0.9400417422123023 0.9527795040124266 0.9907746896462688 1.0 11.355284459915117 -7.099949748973889 2.2736434207513385 0.9739377167950022 1.0764521822301478 0.45045496672361596 0.05407502948885766 0.21625603599305795 2.194299254859243 0.0078354416386558 0.015065541643653983 7.944201495882527e-08 7.099949748973889 0.10251446543514564 VS(ph)QSPSKDSEENPATEERPEK ddPTM_A549_MK2206_60min_R1 1 VSQSPSKDSEENPATEERPEK 21 2 D6RC71;D6RF48;Q9P2W9 D6RC71 STX18 Syntaxin-18 1 VS(0.498)QS(0.41)PS(0.061)KDS(0.029)EENPAT(0.002)EERPEK 47.52 0.0050453 5034700.0 963.94 1145.4 933.62 1028.9 1451.5 1152.1 1137.9 1391.0 1703.5 1649.7 1472.5 True False 1126.6295059296713 1203.6959676010433 1066.0213547387266 1280.980546189076 1237.9862727904226 1274.0144572979139 1344.6417007838245 1588.1785097588402 1317.6599699305127 1277.03162423359 1106.837611067443 1.017881480231902 1.0875090939855119 0.9631235368941312 1.1573337708985947 1.118489524038218 1.151040084434106 1.2148500261813846 1.4348794203218196 1.1904727095962622 1.1537660190296664 1.0 10.112227858278569 -6.277557616415645 23.898155158886507 1.1353133290891746 1.029305136673418 0.22995028306617316 0.1073110054316358 746.131873992722 1106273.2355882009 0.018539753701630208 0.04322206337198355 5.277671850062163e-07 6.277557616415645 -0.10600819241575654 VS(ph)QSPSKDSEENPATEERPEK ddPTM_A549_PD325901_60min_R1 1 VSQSPSKDSEENPATEERPEK 21 2 D6RC71;D6RF48;Q9P2W9 D6RC71 STX18 Syntaxin-18 1 VS(0.521)QS(0.235)PS(0.235)KDS(0.009)EENPATEERPEK 109.97 1.2342e-10 19983000.0 3080.1 3950.6 3549.8 3668.3 3963.1 3607.4 3542.9 3805.5 3428.9 3822.3 3596.8 True False 3392.789484550221 4283.530926631904 3790.710774681492 3894.8825596862393 3684.7455279527776 3578.0225304296564 3677.726998249268 3729.5963171430008 3284.7952573209477 3580.9593256822027 3154.41640199377 1.0755680456155965 1.3579472018736871 1.2017154020266785 1.234739509097294 1.168122739161453 1.1342898572833136 1.1658977539949185 1.1823411502633845 1.0413321637703796 1.1352208679294318 1.0 11.623157401809838 -8.565146471845237 0.6226150126930919 1.0019506069229418 1.2207222748790234 0.28603014077558475 0.07845679758419062 0.2987404404799773 0.24828203761732537 0.018218591500410917 0.020658052234957952 2.721783194082609e-09 8.565146471845237 0.2187716679560816 VS(ph)RSSFSSDPDEKAQDSK ddPTM_A549_PD325901_60min_R1 1 VSRSSFSSDPDEKAQDSK 18 2 P46013 P46013 MKI67 Antigen KI-67 1 VS(0.311)RS(0.311)S(0.311)FS(0.034)S(0.034)DPDEKAQDSK 60.464 0.00067531 10726000.0 1930.9 1973.0 1997.3 2578.8 3000.6 2968.2 2380.4 2688.3 2731.6 2865.0 2858.6 True False 2126.92354654655 2139.271634244102 2132.8487887405886 2738.086619120265 2789.848207508038 2944.027963303572 2470.987424604861 2634.679747569447 2616.800351394879 2684.1034110560413 2507.010322158416 0.8483904225473514 0.8533158461040128 0.8507538919521911 1.092172056460822 1.1128187956985003 1.1743182456340686 0.9856311331328941 1.050924969986208 1.0437932098907112 1.0706391542676843 1.0 11.29175222088025 -6.251968811746302 24.42864588697906 1.0421351164989499 0.8510696047394277 0.7580235027039578 0.05295379171279748 217.23328435457017 560335.308587313 0.00818451431124744 0.021334769544196507 5.597978011515262e-07 6.251968811746302 -0.19106551175952213 VS(ph)RT(ph)PEPK ddPTM_A549_MK2206_60min_R1 1 VSRTPEPK 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 VS(1)RT(1)PEPK 54.486000000000004 0.012167 8031200.0 1699.2 1856.7 1484.0 1682.7 2374.5 2307.1 1658.7 2170.6 2518.8 2667.7 2325.6 True False 1985.9834185485586 1951.1980993931 1694.4535147407614 2094.9615755392747 2025.2141954811286 2551.235790670964 1960.0643194394318 2478.289197183709 1948.2958216970806 2065.064717201885 1748.0893367052254 1.1360880573138856 1.1161890061469577 0.9693174594465772 1.1984293545819742 1.1585301465760465 1.4594424535987949 1.121260955194506 1.4177131254943491 1.1145287490679405 1.1813267627923927 1.0 10.77156320080962 -9.457734596067347 1.6525772970207746 1.0317335483338597 1.1916985468233072 0.0424116504419364 0.13991566417525828 0.37649660115623007 2.09656617563056 0.030585377951441218 0.02522261430121928 3.4855025430126844e-10 9.457734596067347 0.15996499848944756 VS(ph)RTPEPK ddPTM_A549_MK2206_60min_R1 1 VSRTPEPK 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.5)RT(0.5)PEPK 56.563 0.015384 3666400.0 1645.9 1771.9 1452.2 1544.1 1762.0 1285.7 1209.4 1127.2 1923.6 2223.3 2250.1 True False 1923.687681608448 1862.0821416031852 1658.1437965677467 1922.4045693172825 1502.8121341072867 1421.7519206214122 1429.1323252728337 1286.9840519052227 1487.9076713579886 1721.0549858510888 1691.338070399221 1.137376208385343 1.1009520652270672 0.980373956920606 1.1366175710001734 0.8885344452469903 0.8406077681949322 0.8449714165870478 0.7609265553878563 0.879722213671206 1.0175700624091395 1.0 10.723949344019898 -6.768343981609009 24.992537199031133 0.909358186809098 1.0819489638906157 0.5861779572764437 0.07913242888870779 108.3483355927932 392189.11497458577 0.012845654876712643 0.024657757076823317 1.7047316266970112e-07 6.768343981609009 0.1725907770815177 VS(ph)SCEQR ddPTM_A549_PD325901_60min_R1 1 VSSCEQR 7 0 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;D6R9F5;F8WA26 Q8WX93-4 PALLD Palladin 1 VS(0.55)S(0.45)CEQR 62.54600000000001 0.027198000000000003 2448600.0 748.08 767.56 854.58 709.62 610.78 463.75 433.27 719.3 514.67 752.19 1118.4 True False 824.0245308926104 832.2449749520543 912.5769378070058 753.4516157360489 567.8809198766115 459.9733737558226 449.75832694444114 704.9529972200664 493.0402097131365 704.6965950304519 980.8438901217287 0.8401179221194353 0.848498913368128 0.930399778188708 0.7681667014743202 0.578971766655073 0.4689567609976518 0.45854221194019307 0.7187208936302569 0.502669399971434 0.7184594838460938 1.0 9.937879726964349 -4.97778938841908 17.746070865816474 0.7269269495074254 1.1203507767502534 0.029415492658425024 0.17667400815295786 58733696.8785465 1119967767.7275724 0.031081100206213436 656692028.3925816 1.0524721475959463e-05 4.97778938841908 0.393423827242828 VS(ph)SGER ddPTM_A549_MK2206_60min_R1 2 VSSGER 6 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 VS(0.623)S(0.377)GER;VS(0.621)S(0.379)GER 79.469 0.043426 40882000.0 4674.4 2741.3 2429.0 1452.1599999999999 278.93 459.52 664.1 592.06 651.8 4593.0 4606.9 True False 5463.324441892294 2880.820460961008 2773.4687245992654 1807.93926518994 237.8997664963366 508.1461013953106 784.7583737503626 675.9863181077054 504.1683407107177 3555.4381100229634 3462.879586028251 1.5776824767269637 0.8319147083786312 0.8009139953319298 0.5220912885577853 0.06869998236617741 0.1467409099194606 0.2266201738335467 0.195209305236925 0.1455922240972212 1.0267287734659212 1.0 11.757756506543103 -5.11234393761254 1.1608184214912443 0.4651116004394788 2.362450293360953 0.5212671302318683 0.3228756164426952 1.598592209071001 1.4000031340640298 0.057269305844618125 3.9714344185184265 7.720689063311498e-06 5.11234393761254 1.897338692921474 VS(ph)SGVYEPVVIESH ddPTM_A549_PD325901_60min_R1 1 VSSGVYEPVVIESH 14 0 Q5T9C2-3;Q5T9C2 Q5T9C2-3 FAM102A Protein FAM102A 1 VS(0.638)S(0.362)GVYEPVVIESH 248.41 1.9196999999999997e-69 5279000.0 2714.1 2859.8 2796.3 3016.2 2855.9 2878.9 2648.9 3429.9 3059.4 2777.2 3301.6 True False 2989.633433985182 3100.805382468973 2986.0737335179037 3202.5038237127924 2655.31143632014 2855.4551928962524 2749.705339033697 3361.4879537955026 2930.824057350087 2601.847118040083 2895.5241305667923 1.0325016470852093 1.0708960597962613 1.031272266735828 1.106018696202649 0.9170399957262206 0.986161766967317 0.9496399321995801 1.1609255534463458 1.0121912044906305 0.8985755257825384 1.0 11.499608804595947 -6.721171421658024 24.999993827337867 1.00687423718443 1.058873807205048 0.17204831136259902 0.06818122463116309 232.01904094741846 144045.8060348919 0.008250925612876008 0.01717550416568707 1.900328047771834e-07 6.721171421658024 0.05199957002061817 VS(ph)SGYVPPPVATPFSSK ddPTM_A549_MK2206_60min_R1 2 VSSGYVPPPVATPFSSK 17 0 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 VS(0.876)S(0.12)GY(0.003)VPPPVATPFSSK;VS(0.742)S(0.114)GY(0.144)VPPPVATPFSSK 128.06 5.7795e-12 9152100.0 2450.0 2724.3999999999996 2876.5 2546.7 3402.7 2975.2 2694.7 2824.3 4604.1 3866.2 3980.1000000000004 True False 2863.500103250923 2863.060323146743 3284.4309536063356 3170.6416143257075 2902.1673375294336 3290.0336892220753 3184.292109238221 3224.653174055998 3561.2787012369067 2992.8227348074847 2991.731324828201 0.9571381224934556 0.9569911239643664 1.0978362015161713 1.0598015898061235 0.9700628239723663 1.0997089417483048 1.064364330717792 1.0778552028702553 1.1903738386138039 1.0003648088216432 1.0 11.546764903155497 -7.278037242768983 24.322384425910286 1.0894736284668844 1.0133399158828322 0.17053895017828213 0.06360534392455877 759.136161422615 1112429.715305728 0.011711968245822133 0.018758308591280123 5.2718465095192225e-08 7.278037242768983 -0.07613371258405222 VS(ph)SGYVPPPVATPFSSK ddPTM_A549_PD325901_60min_R1 2 VSSGYVPPPVATPFSSK 17 0 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 VS(0.776)S(0.222)GY(0.002)VPPPVATPFSSK;VS(0.834)S(0.119)GY(0.047)VPPPVATPFSSK 146.2 2.2458e-16 12987100.0 4608.9 5273.9 4597.5 5487.8 5813.5 5805.9 5216.200000000001 6132.2 5381.700000000001 5566.9 6094.1 True False 5076.792135107146 5718.350061753658 4909.513997013394 5826.76894230192 5405.179815486232 5758.618675340006 5414.705345414165 6009.888460382162 5155.525864365874 5215.404983946901 5344.564333682784 0.9498982177297277 1.0699375486445515 0.9185994761205148 1.0902233706085567 1.0113415197234008 1.0774720474497328 1.0131238034294647 1.1244861293008184 0.9646297700776952 0.9758335120185776 1.0 12.383856634992823 VS(ph)SLAGFTDCHR ddPTM_A549_MK2206_60min_R1 2 VSSLAGFTDCHR 12 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 VS(0.5)S(0.5)LAGFTDCHR;VS(0.5)S(0.5)LAGFTDCHR 62.035 0.0024014 2714300.0 643.6099999999999 470.54999999999995 660.72 463.898 650.91 619.99 460.31 533.89 875.0699999999999 968.29 681.85 True False 752.2356332462556 494.49898511844833 754.4200311721811 577.5530308251724 555.162001255263 685.5969302839457 543.9423686508501 609.570542469552 676.868042199644 749.5526164933885 512.5278268973417 1.4676971547086883 0.9648236820856471 1.4719591631525013 1.126871558021483 1.083184116296696 1.3376774768197501 1.0612933388293875 1.1893413595895308 1.3206464247944518 1.4624622843034871 1.0 9.001486525391742 -10.967001611792499 1.2047394309427346 0.998685901912864 1.2249951319732446 0.0 0.20702074665690204 0.5459791513240947 1.3956552366264696 0.10294060165053931 0.02324612104245651 1.078942717953746e-11 10.967001611792499 0.22630923006038062 VS(ph)SPAGPTEDNDLSR ddPTM_A549_MK2206_60min_R1 1 VSSPAGPTEDNDLSR 15 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 VS(0.549)S(0.451)PAGPTEDNDLSR 67.964 0.0027929 2055100.0 452.27 675.65 662.34 856.75 812.04 534.47 603.76 525.83 904.36 792.28 945.26 True False 528.6021190601206 710.0376990655186 756.269771531938 1066.6537884609688 692.5899917028833 591.0272606475277 713.4553768039742 600.3680127868379 699.5239039661631 613.3033977376425 710.5258541511791 0.7439590212964291 0.999312966470103 1.0643803699942858 1.501217418379847 0.9747569179312655 0.831816685057282 1.0041230345605014 0.8449629373501968 0.984515763753369 0.863168305775893 1.0 9.472743336043719 -6.949611892017677 24.9999993155873 0.9683909236939368 1.0916418740776563 0.11357850096544708 0.17719994626758756 200.70774515124407 99579.84189868347 0.024917217734920623 0.0470891102794623 1.1230215961130178e-07 6.949611892017677 0.12325095038371958 VS(ph)SPAPMEGGEEEEELLGPK ddPTM_A549_MK2206_60min_R1 2 VSSPAPMEGGEEEEELLGPK 20 0 O14497-2;O14497;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 VS(0.536)S(0.464)PAPMEGGEEEEELLGPK;VS(0.53)S(0.47)PAPMEGGEEEEELLGPK 74.584 9.436e-05 4626400.0 1417.2800000000002 2045.56 1850.2199999999998 1626.25 2452.3999999999996 2420.1000000000004 1781.73 2689.5 2916.8 3068.6 2815.0 True False 1656.482214830803 2149.6702667068184 2112.6090175496306 2024.6813230051366 2091.655208674635 2676.193375667636 2105.4472779133184 3070.744861248312 2256.14945717248 2375.4011287647427 2115.9578099523596 0.7828521944244713 1.01593248059857 0.9984173633392036 0.9568628039189127 0.9885146097131909 1.26476688858361 0.9950327308089012 1.4512316109542134 1.066254462428661 1.1226127088130478 1.0 11.047095146528337 -7.016660210583654 23.6383228435722 1.0805043971235126 0.9513700587168327 0.272336464949509 0.14205122735192904 530.8177748770157 753152.7343228685 0.021285496118058026 0.03752576025543611 9.623649325013673e-08 7.016660210583654 -0.12913433840667998 VS(ph)SPPNAMMSSR ddPTM_A549_MK2206_60min_R1 1 VSSPPNAMMSSR 12 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.5)S(0.5)PPNAMMSSR 74.848 0.0012912000000000002 9324200.0 7633.6 8527.5 7919.0 8187.0 11197.0 7346.3 7549.3 7685.8 12214.0 12084.0 13661.0 True False 8921.965056398469 8961.513326102579 9042.033277110579 10192.8153675284 9549.936132576213 8123.680589920725 8920.910090277997 8775.285686775342 9447.548501750096 9354.21600729751 10268.596675580538 0.8688592354216759 0.872710615600835 0.880551993887654 0.992620091094594 0.9300137530269007 0.7911188691673344 0.868756498294705 0.8545749691039675 0.9200428062596953 0.9109536875221235 1.0 13.32595141344363 -9.815025531460046 0.867595320127234 0.9901832998757555 0.8850455501878804 0.15377717558394577 0.05333685785439906 0.37928970618502766 0.5917237716364141 0.018904950962533137 0.010472704629907159 1.530997454207928e-10 9.815025531460046 -0.10513774968787504 VS(ph)SPSPELGTTPASIFR ddPTM_A549_MK2206_60min_R1 1 VSSPSPELGTTPASIFR 17 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 VS(0.499)S(0.455)PS(0.045)PELGTTPASIFR 54.233999999999995 0.013013999999999998 1565100.0 475.16 774.47 884.88 748.63 1126.4 972.13 779.41 770.21 1210.2 933.49 1253.8 True False 555.3553914533506 813.8872149711713 1010.369289840839 932.0443836072783 960.7080521330571 1075.0001513523314 921.0187081535466 879.3896261691996 936.0916322922841 722.6139606630386 942.4468568803802 0.5892697157393555 0.8635895053703528 1.0720703055717016 0.98896227071356 1.0193763660193254 1.1406480307130733 0.9772632816689915 0.9330920038081424 0.9932566759157829 0.7667423954863443 1.0 9.880267459109104 -5.360085939424936 2.7114441761323964 1.0053655335324647 0.5520670464655132 0.6225963860188473 0.08943646113029759 0.09663508294676643 1.057841400045162 0.007217139576631664 0.08724162979234791 4.364294617940159e-06 5.360085939424936 -0.4532984870669515 VS(ph)SPTVNTTLR ddPTM_A549_MK2206_60min_R1 1 VSSPTVNTTLR 11 0 Q9NSK0;Q9NSK0-3;Q9NSK0-5 Q9NSK0 KLC4 Kinesin light chain 4 1 VS(0.468)S(0.468)PT(0.06)VNT(0.003)TLR 94.82 0.00028653 7707300.0 2365.0 2240.6 2017.5 2477.3 2458.6 2772.2 2185.1 2066.9 3142.7 2924.7 3698.8 True False 2764.1541813014023 2354.636969623622 2303.6118369201404 3084.2386112102213 2096.943196887727 3065.5523639625694 2582.1043856074666 2359.889404615779 2430.883467860654 2264.008238707634 2780.285878313246 0.9941978279508327 0.8469046251647121 0.8285521481401417 1.1093242731863884 0.7542185547336262 1.102603292659383 0.9287190233739514 0.8487937959989514 0.8743286029764074 0.8143077143135982 1.0 11.441017517977814 -10.994917143377435 1.3101270909039373 0.9994010347865483 0.9153008362900944 0.0 0.11919022615300831 0.9133207503077562 2.822213138687442 0.06680283207239265 0.015740269208213274 1.0117724662746402e-11 10.994917143377435 -0.08410019849645389 VS(ph)VS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 VSVSPGR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 VS(1)VS(1)PGR 56.431999999999995 0.043329 12524000.0 801.56 762.34 430.32 639.08 736.95 779.6 322.23 760.78 840.94 772.58 1060.3 True False 936.8437317395145 801.1398497825904 491.34584667334553 795.6546286893914 628.5456312317617 862.0967545434024 380.7750199873204 868.622894791035 650.4684327052336 598.053641419887 796.9982472086995 1.175465234736201 1.0051965014834048 0.6164955172664053 0.9983141512242797 0.7886411713364443 1.081679611671287 0.477761427105889 1.0898680114205823 0.8161478836162408 0.7503826307202436 1.0 9.638432741159734 -5.521738605814354 24.96301094598956 0.8855951295506729 1.1328981545776273 0.20243983424146028 0.18562691883098753 39.66152216056082 868328.8034601285 0.02260123233562952 0.0899322899103454 3.007886151516777e-06 5.521738605814354 0.24730302502695445 VS(ph)VS(ph)PGR ddPTM_A549_PD325901_60min_R1 2 VSVSPGR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 2 VS(1)VS(1)PGR;VS(1)VS(1)PGR 66.27 0.028100999999999998 42915000.0 1528.69 1658.4299999999998 2037.12 1543.62 1738.6599999999999 1499.18 1442.56 1503.98 1824.3200000000002 1633.38 1650.08 True False 1683.8814834379014 1798.1917163605906 2175.371213397701 1638.9659015846219 1616.542519651379 1486.9711751315456 1497.457410199121 1473.9819390505138 1747.650174643691 1530.248108045626 1447.1306207189405 1.1636002025866483 1.2425911597857293 1.5032307258600939 1.1325625193186617 1.1170674550776032 1.0275307244848513 1.034776950165824 1.0185548684736099 1.2076658109655998 1.0574360642616991 1.0 10.498979432764246 -6.498872375328462 23.342199305347453 1.0863382595670816 1.3005543008739489 0.5404658521690664 0.09432037140971514 228.88296086420746 222549.676169643 0.014935862627317107 0.03449084399428644 3.1704990301386473e-07 6.498872375328462 0.21421604130686722 VSAEAEVAPVS(ph)PEVTQEVVEEHCAS(ph)PEDK ddPTM_A549_PD325901_60min_R1 2 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VSAEAEVAPVS(1)PEVT(0.001)QEVVEEHCAS(1)PEDK;VSAEAEVAPVS(1)PEVTQEVVEEHCAS(1)PEDK 117.66 6.2122e-21 99599000.0 3750.0 3865.8 3929.8 3107.2 4630.3 2937.2 3431.8999999999996 3895.1 3545.8 3783.3 4830.5 True False 4130.697239395906 4191.584533026283 4196.499859807121 3299.1246870367963 4305.0837016678215 2913.2804170255577 3562.50283250774 3817.4091748531623 3396.7823568516505 3544.4217923379815 4236.379123062419 0.9750537238059758 0.9894262083881306 0.990586474416749 0.7787604912593151 1.0162177596975166 0.6876817046817065 0.8409310708557304 0.9011018759089745 0.801812646644374 0.8366630297657988 1.0 12.048615989782473 -6.153507224297898 24.999809297329737 0.8848549413243214 0.9854651634485098 0.2420395437326146 0.09155728968634357 41.11865941025053 9502.2759702218 0.014103517705065197 0.03731439692403439 7.022516619907431e-07 6.153507224297898 0.10061022212418835 VSAEAEVAPVS(ph)PEVTQEVVEEHCASPEDK ddPTM_A549_MK2206_60min_R1 2 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVS(0.996)PEVT(0.004)QEVVEEHCASPEDK;VSAEAEVAPVS(0.96)PEVT(0.04)QEVVEEHCASPEDK 134.12 6.703999999999999e-28 209550000.0 3560.2 4687.2 3528.1 3766.6000000000004 5106.7 4211.1 3889.7 5090.6 6284.700000000001 6007.700000000001 6119.3 True False 4161.074721466911 4925.758459350102 4028.4376316421053 4689.4171690891 4355.511194804585 4656.715806898053 4596.408140907673 5812.208139308667 4861.2254846036385 4650.55639747114 4599.708925911714 0.9046387039897615 1.070884818733125 0.8758027293745819 1.0195030260875921 0.9469101773524232 1.0123935844429635 0.9992823926345761 1.2636034655511648 1.0568550234165284 1.0110544976602727 1.0 12.167326853564292 -7.651311601796472 2.6789060303272167 1.047514148035469 0.9687885011900782 0.23795384007010623 0.08462915033164448 0.40224005037776805 5.868983641267512 0.01336444160347435 0.020532499381606034 2.231970232649171e-08 7.651311601796472 -0.07872564684539085 VSAEAEVAPVS(ph)PEVTQEVVEEHCASPEDK ddPTM_A549_PD325901_60min_R1 3 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVS(1)PEVTQEVVEEHCASPEDK;VSAEAEVAPVS(0.992)PEVT(0.008)QEVVEEHCASPEDK;VSAEAEVAPVS(0.988)PEVT(0.012)QEVVEEHCASPEDK 205.96 2.0527999999999996e-78 404544500.0 6382.599999999999 6629.2 7634.700000000001 6525.0 7943.1 6422.799999999999 6144.900000000001 7933.6 6561.7 6948.860000000001 8263.800000000001 True False 7030.556853378217 7187.865949179427 8152.836653180679 6928.034430649809 7385.204058207389 6370.494846272549 6378.747532118303 7775.358124211199 6285.934567926415 6510.10779370013 7247.404988544302 0.970079202761699 0.9917847782124793 1.1249318433380717 0.955933115591124 1.0190135738075767 0.879003568358902 0.8801422774359853 1.0728471965484767 0.86733590545338 0.8982674217861994 1.0 12.823248799743592 -7.227762139384398 23.89719657361851 0.9387711405405872 1.014326541151786 0.24050695405280176 0.06981121753131095 487.2515292824684 345750.8246557263 0.010911648548137354 0.018898516048789914 5.9188571785645585e-08 7.227762139384398 0.07555540061119892 VSAEAEVAPVSPEVTQEVVEEHCAS(ph)PEDK ddPTM_A549_MK2206_60min_R1 2 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVSPEVTQEVVEEHCAS(1)PEDK;VSAEAEVAPVSPEVT(0.019)QEVVEEHCAS(0.981)PEDK 125.02 1.2114000000000001e-21 44880000.0 2036.1 2393.9 1954.46 1866.8899999999999 2603.3999999999996 2643.3 2593.5 2910.9 2584.7 2891.1000000000004 2825.6 True False 2379.7439021343685 2515.7392848263817 2231.6318169947635 2324.278133807877 2220.443308703127 2923.0122515194666 3064.7053791922394 3323.5289892573746 1999.2695769177553 2237.9985020438467 2123.9255374072436 1.1204460138651622 1.184476216570869 1.0507109489907076 1.0943312714461786 1.0454431050411053 1.3762310401369808 1.4429438910242782 1.5648048534293404 0.9413086954820175 1.0537085517488791 1.0 11.05251747232185 VSAEAEVAPVSPEVTQEVVEEHCAS(ph)PEDK ddPTM_A549_PD325901_60min_R1 1 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVSPEVT(0.13)QEVVEEHCAS(0.87)PEDK 127.77 1.313e-27 44245000.0 1463.3 1284.3 1519.7 1559.4 1608.8 1282.5 966.74 1766.2 1259.1 1330.5 1765.9 True False 1611.8531387754747 1392.5324682512419 1622.8359806984797 1655.7205963456427 1495.8034380586998 1272.0557452115204 1003.5298197204269 1730.971755442903 1206.1844056381947 1246.4920029354491 1548.7054949624119 1.0407744687537221 0.8991589897374513 1.0478660958956996 1.069099710520384 0.9658411124156333 0.8213671026216602 0.6479797630890327 1.1176894258290953 0.7788339419997148 0.8048605800069834 1.0 10.596847109000798 -7.032929191412515 8.090124785109206 0.8865827257096142 1.0095967607218819 0.2466807599444848 0.12207425976139272 0.3842354429407083 86.02174095482044 0.018819394540112066 0.03311877257270869 9.269809486266278e-08 7.032929191412515 0.12301403501226771 VSAGEPGSHPS(ph)PAPR ddPTM_A549_MK2206_60min_R1 4 VSAGEPGSHPSPAPR 15 0 A0A1B0GV68;C9JME2;Q9Y4F1;Q9Y4F1-2 A0A1B0GV68;C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 VSAGEPGS(0.09)HPS(0.91)PAPR;VSAGEPGS(0.009)HPS(0.991)PAPR;VSAGEPGS(0.095)HPS(0.905)PAPR;VSAGEPGS(0.004)HPS(0.996)PAPR 137.27 2.6794e-10 117668600.0 7470.400000000001 8673.9 7006.929999999999 6656.7 9584.0 7982.800000000001 5800.419999999999 7541.599999999999 9790.300000000001 11777.800000000001 11602.2 True False 8731.220886255389 9115.364460777617 8000.618036416771 8287.591798830614 8174.20629584803 8827.534597446218 6854.281232147385 8610.644895181358 7572.8126818965075 9117.186799962648 8721.0535355699 1.001165839728425 1.0452136801591083 0.9173912307481267 0.9502970902573459 0.9372957364048409 1.0122096557992704 0.7859464689892509 0.9873399882321298 0.8683369103296811 1.0454226387645793 1.0 13.090286713096832 -5.763338447666595 24.998931564473118 0.9345765617892098 1.0231897737010804 0.14515814778072766 0.0696592547945509 52.39931335676653 689823.5200138728 0.008900830450289634 0.029867432032872503 1.7244934625932165e-06 5.763338447666595 0.08861321191187066 VSAGEPGSHPS(ph)PAPR ddPTM_A549_PD325901_60min_R1 4 VSAGEPGSHPSPAPR 15 0 A0A1B0GV68;C9JME2;Q9Y4F1;Q9Y4F1-2 A0A1B0GV68;C9JME2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 1 VSAGEPGS(0.053)HPS(0.947)PAPR;VSAGEPGS(0.004)HPS(0.996)PAPR;VSAGEPGS(0.001)HPS(0.999)PAPR;VS(0.001)AGEPGS(0.088)HPS(0.912)PAPR 148.7 8.036100000000001e-14 89002700.0 6273.0 6550.6 4698.88 5918.05 6619.3 6851.900000000001 5398.400000000001 6363.530000000001 5866.900000000001 5670.0 6778.0 True False 6909.830342061472 7102.642051332698 5017.774253460864 6283.594507633278 6154.383203345318 6796.100398140202 5603.839066117827 6236.604402057292 5620.33459569433 5311.995232351747 5944.3489692820785 1.1624200358640786 1.1948561714724684 0.8441251143549333 1.0570702595194663 1.0353334293037992 1.1432875884743006 0.9427170401798641 1.0491652549817427 0.9454920336504267 0.8936210272650424 1.0 12.537303097960269 -5.731534842345836 24.995416107970126 0.9910254249211489 1.1786384145065958 0.45750690091878055 0.07918337500027213 124.22744125090676 103832.52164696487 0.009714444547156063 0.03761354828999268 1.8555179399592701e-06 5.731534842345836 0.18761298958544692 VSALEEDMDDVES(ph)S(ph)EEEEEEDEKLER ddPTM_A549_PD325901_60min_R1 3 VSALEEDMDDVESSEEEEEEDEKLER 26 1 Q8NAV1 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 2 VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER 91.729 4.0692e-09 6653800.0 1475.6999999999998 1943.44 1889.2800000000002 1793.47 1715.6399999999999 1793.55 1548.87 1860.69 2181.36 1577.23 1932.84 True False 1625.5119776470783 2107.2205093032744 2017.4979019635596 1904.2485686341017 1595.1393650366902 1778.943923449606 1607.8130954241856 1823.577078266934 2089.6850250837374 1477.6434286282445 1695.112933282263 0.958940225002935 1.2431151151817619 1.190184950130172 1.1233756354786861 0.9410224733215898 1.0494545162870184 0.9484991022462215 1.0757850066873862 1.2327703860045838 0.8717079550369955 1.0 10.7271656777044 -6.53503423286844 24.982711232932417 1.0809682821676168 1.1444497509654543 0.016949463515629093 0.11976601033465968 567.7354536334087 1166844.0978124503 0.017261086038323742 0.03595211611668253 2.917197059527275e-07 6.53503423286844 0.06348146879783756 VSALEEDMDDVES(ph)SEEEEEEDEKLER ddPTM_A549_PD325901_60min_R1 4 VSALEEDMDDVESSEEEEEEDEKLER 26 1 Q8NAV1 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 1 VSALEEDMDDVES(0.5)S(0.5)EEEEEEDEKLER;VSALEEDMDDVES(0.5)S(0.5)EEEEEEDEKLER;VSALEEDMDDVES(0.5)S(0.5)EEEEEEDEKLER;VS(0.001)ALEEDMDDVES(0.85)S(0.15)EEEEEEDEKLER 158.83 3.8471999999999995e-41 12556100.0 2442.9599999999996 2126.0899999999997 2222.29 2268.85 2435.2200000000003 2203.8 1962.17 2187.67 2307.46 2142.61 2594.62 True False 2690.9675007879005 2305.263065813505 2373.107963115368 2408.991711567788 2264.178548252924 2185.852983467562 2036.8414530906223 2144.035205656085 2210.485480608299 2007.32523893989 2275.498188651323 1.1825838905118287 1.0130805980468935 1.0428960018297786 1.0586656247771333 0.9950254232436423 0.9606041412685574 0.8951189076963619 0.9422267248328792 0.971429242015105 0.8821475881418399 1.0 11.15196672255035 -2.0000000000097278 0.6139544346341863 0.9766319304938398 14.200564721374043 0.629287398978114 0.048264936616410216 78.74470830658139 0.5318905424548536 0.0071353930651251105 1406.7214659573274 0.00999999999977601 2.0000000000097278 13.223932790880204 VSALVQS(ph)PQMK ddPTM_A549_PD325901_60min_R1 2 VSALVQSPQMK 11 0 Q5VV67-2;Q5VV67;E7EVG6;X6R7H2 Q5VV67-2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 1 VS(0.001)ALVQS(0.999)PQMK;VSALVQS(1)PQMK 85.845 0.00013957 6290600.0 4697.1 3848.0 4308.5 4806.299999999999 5637.2 5021.1 4279.2 5099.0 5074.0 4505.4 5083.8 True False 5173.946134177736 4172.284464557174 4600.900719115219 5103.174235100718 5241.26251928425 4980.2098263404005 4442.0472976680885 4997.296444911882 4860.7574253103 4220.928275103627 4458.524828863415 1.160461437981203 0.935799311365681 1.0319334075096087 1.1445880489582558 1.1755597917395413 1.117008431600453 0.9963042638926995 1.120840779569195 1.0902165204605183 0.9467096039879278 1.0 12.122350736035962 -10.669344592063702 0.8218069722344215 0.9971087837723343 1.0837936450379293 0.2503862408103099 0.07142009296538564 1.0279419926466533 1.172344291884479 0.05643254356222083 0.013186449595959139 2.141190993478454e-11 10.669344592063702 0.08668486126559505 VSAS(ph)LPR ddPTM_A549_MK2206_60min_R1 4 VSASLPR 7 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 VS(0.092)AS(0.908)LPR;VS(0.015)AS(0.985)LPR;VS(0.294)AS(0.706)LPR;VS(0.243)AS(0.757)LPR 61.961999999999996 0.027637000000000002 72539000.0 8821.49 7788.62 7240.05 7142.66 10360.04 7999.93 7906.41 7703.599999999999 12584.11 12077.6 11850.699999999999 True False 10310.341847276319 8185.027490114229 8266.797957815945 8892.612020646193 8836.091839862007 8846.477282676247 9342.90235477128 8795.60889128555 9733.829177694313 9349.261771742506 8907.844127318804 1.1574452471228476 0.9188561646484337 0.928035767090167 0.9982900344398824 0.9919450445661993 0.9931109206935542 1.0488399012414495 0.9874004041349301 1.0927255841671453 1.0495538132588054 1.0 13.120860598208575 -7.75254832668351 22.025524694638126 1.0401177673986588 0.9909170704518895 0.07316626334217025 0.06343210411998865 76.36070285839169 189161.96344365506 0.009868521534526812 0.014488036533118021 1.767875484144049e-08 7.75254832668351 -0.04920069694676932 VSAS(ph)LPR ddPTM_A549_PD325901_60min_R1 2 VSASLPR 7 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 VS(0.001)AS(0.999)LPR;VS(0.072)AS(0.928)LPR 82.426 0.014968 107301000.0 5512.0 5441.7 4879.6 5240.8 5226.7 4651.1 5586.9 5123.7 5769.5 5710.6 6033.1 True False 6071.574182280065 5900.291156647812 5210.758999418501 5564.512313279624 4859.594623136128 4613.222983667293 5799.512536768986 5021.503784035105 5527.027978976702 5350.03174142291 5291.066946971924 1.1475141484941567 1.1151420338811904 0.9848219747815923 1.0516805719996025 0.918452681064123 0.8718889838102387 1.0960950966776266 0.9490531558873793 1.0445961153713654 1.0111442162879325 1.0 12.36934295669828 -5.681203982347485 4.800437234876906 1.0051007480777623 1.1389445071849593 0.4256888433736302 0.06115370703600188 0.1512171059704548 6.128573897088309 0.00831834627880919 0.03423740166271461 2.0835120553162557e-06 5.681203982347485 0.13384375910719704 VSAS(ph)SPTTK ddPTM_A549_MK2206_60min_R1 1 VSASSPTTK 9 0 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 PHF20 PHD finger protein 20 1 VS(0.001)AS(0.468)S(0.468)PT(0.044)T(0.018)K 112.83 0.00026259 16993000.0 5360.7 5780.3 4673.6 4878.9 7006.5 5465.0 4720.1 5313.8 7487.4 7894.7 8418.9 True False 6265.4551034682545 6074.492580342507 5336.386756396512 6074.230719022144 5975.853131454428 6043.302672626597 5577.681072035969 6067.047422829996 5791.515854920884 6111.281786892727 6328.254780180438 0.9900763039900248 0.959900129079396 0.8432635760983624 0.9598587493737015 0.9443129802817513 0.954971454618691 0.8813932538722679 0.9587236344894772 0.9151837364480686 0.9657136128641262 1.0 12.627591969602914 -10.842241457517282 0.9779752675424178 1.0018699263132678 0.9319330582973074 0.15840687590432556 0.04051970069814575 0.5929114963786097 0.9613429193401692 0.03011973486327376 0.006620203464917414 1.4379988624192402e-11 10.842241457517282 -0.06993686801596033 VSAS(ph)SPTTK ddPTM_A549_PD325901_60min_R1 1 VSASSPTTK 9 0 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 PHF20 PHD finger protein 20 1 VSAS(0.498)S(0.498)PT(0.001)T(0.003)K 157.24 1.2137000000000001e-05 21771000.0 8523.3 9730.0 9296.0 9346.6 9984.1 9900.7 9090.3 8700.4 9748.2 9500.8 9674.6 True False 9388.579141478172 10549.98124743797 9926.882461389134 9923.918254331267 9282.851259275152 9820.071981766623 9436.236340903031 8526.863696668242 9338.517054278653 8900.917866583326 8484.685532342344 1.1065323641860765 1.2434145269406898 1.1699764739128342 1.1696271142286634 1.094071338753843 1.157387854191412 1.1121492134191089 1.004971093408839 1.100632076307558 1.0490568958218154 1.0 13.050645474855777 -8.311364331783176 0.11760342012328005 0.8991224587114054 1.3029315053300539 0.5421563274224108 0.04758427637893837 3.4311811734670257 0.30586045684000707 0.44883412790442495 0.5237424060848389 4.8824259836741724e-09 8.311364331783176 0.40380904661864847 VSAS(ph)SPTTKDKEK ddPTM_A549_MK2206_60min_R1 2 VSASSPTTKDKEK 13 2 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 PHF20 PHD finger protein 20 1 VS(0.094)AS(0.451)S(0.451)PT(0.003)TKDKEK;VS(0.096)AS(0.45)S(0.45)PT(0.003)T(0.001)KDKEK 48.177 0.006783 14674700.0 4074.2 4894.7 4525.5 4375.2 5576.9 4082.3 3834.8999999999996 2916.6 6630.5 6967.7 6233.6 True False 4761.825355373431 5143.819323045946 5167.283949433505 5447.124196410193 4756.54539767476 4514.286276388571 4531.651690250363 3330.036981712893 5128.702336732762 5393.6917307221875 4685.625081392198 1.0162625631922289 1.0977872180754182 1.1027950080671405 1.1625181489748508 1.0151357214994015 0.9634330954723509 0.9671391994734486 0.710692153953442 1.0945609705522825 1.151114661764532 1.0 12.194025806755725 -6.893934309288866 9.01651779835719 1.0056618212420094 1.0954605186026987 0.17452614869041028 0.10879504909641766 0.44808260236189573 35.08363074485869 0.015840785493646377 0.029988569032617787 1.2766318955725328e-07 6.893934309288866 0.08979869736068924 VSASS(ph)PSLAVASQSDSK ddPTM_A549_MK2206_60min_R1 2 VSASSPSLAVASQSDSK 17 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 VSAS(0.012)S(0.918)PS(0.07)LAVASQSDSK;VSAS(0.021)S(0.973)PS(0.006)LAVASQSDSK 278.39 2.2950999999999997e-115 14752200.0 6719.2 7135.0 6531.6 6038.9 8900.8 6834.700000000001 6123.799999999999 5805.1 10209.5 9847.599999999999 10099.0 True False 7853.236691332079 7498.141023950974 7457.8790949331315 7518.430771096519 7591.504110818463 7557.943417493319 7236.415192248864 6627.990702373145 7897.064551221354 7623.020320544768 7591.13958177936 1.0345267145636234 0.9877490649689006 0.9824452593170481 0.9904218846327947 1.0000480203314899 0.995626985391532 0.9532712597747611 0.8731219642281359 1.0403002693003156 1.0041997302805403 1.0 12.8901007639223 VSASS(ph)PSLAVASQSDSK ddPTM_A549_PD325901_60min_R1 2 VSASSPSLAVASQSDSK 17 0 P04150-3;A0A494C0P1;P04150;P04150-10;P04150-7;P04150-5;P04150-6;P04150-2;P04150-9;P04150-8;D6RDA9;Q3MSN4 P04150-3 NR3C1 Glucocorticoid receptor 1 VSAS(0.015)S(0.97)PS(0.015)LAVASQSDSK;VSAS(0.001)S(0.999)PSLAVASQSDSK 261.74 1.0840999999999996e-99 22177000.0 6017.0 6055.4 5997.5 6201.2 6414.4 6322.6 6032.0 7410.200000000001 5785.7 6172.3 6331.7 True False 6627.841410518714 6565.709809428146 6404.5264158973 6584.23404005297 5963.874672478696 6271.110841851347 6261.55106083705 7262.397747810563 5542.5471493137175 5782.579924628689 5552.9410399532835 1.1935731647124554 1.1823842108511535 1.153357539692368 1.1857201422956876 1.074002880558024 1.1293314293688421 1.127609858593011 1.307847084195164 0.9981282188006712 1.0413544611806895 1.0 12.439036362418024 -8.807580113513042 24.997203950025053 0.999115963434243 1.1637961698700778 0.5997116251291592 0.05634184216583098 51.28265214056197 27782.653083521393 0.009176002250250295 0.009768614656685735 1.5574707045431307e-09 8.807580113513042 0.1646802064358348 VSASS(ph)PTTK ddPTM_A549_PD325901_60min_R1 1 VSASSPTTK 9 0 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 PHF20 PHD finger protein 20 1 VSAS(0.06)S(0.814)PT(0.125)TK 168.46 2.1555e-07 28383000.0 8914.0 8354.0 7138.3 7407.0 9217.2 7653.3 8153.1 7639.7 8708.4 8976.3 9059.2 True False 9818.94271786003 9058.020898365554 7622.747964084988 7864.513567482478 8569.81566961378 7590.974062243525 8463.370682047509 7487.320190271293 8342.416232276752 8409.534886095058 7944.975831000331 1.2358681670934364 1.1400942043174325 0.9594425617183064 0.9898725603161813 1.0786459080435964 0.9554433170991491 1.0652481344278562 0.9423968492209477 1.0500241170936804 1.0584720539088457 1.0 12.95582711549466 -5.561361159728094 4.147769086973138 1.0152640524029972 1.219687561472255 0.7038662690721791 0.045859352041088125 0.07022814792021848 2.5724491950906305 0.005689577201634813 0.027536361473559322 2.7456099514638545e-06 5.561361159728094 0.20442350906925788 VSDES(ph)LSKVQEAESPVFK ddPTM_A549_MK2206_60min_R1 2 VSDESLSKVQEAESPVFK 18 1 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 VS(0.003)DES(0.877)LS(0.12)KVQEAESPVFK;VS(0.073)DES(0.853)LS(0.073)KVQEAES(0.001)PVFK 91.238 1.4916e-06 4357900.0 3226.5 3512.2 3780.7 2357.7 5004.1 3241.9 3199.5 3318.7 5350.8 5269.3 5376.0 True False 3771.054319648616 3690.955978180885 4316.86010995984 2935.3366058411757 4268.003518891184 3584.9557062009435 3780.8077350011863 3789.135888092497 4138.852343471785 4078.9614703122134 4040.990829948095 0.9332004150321356 0.9133789541977986 1.068267732252015 0.7263903159807168 1.0561774818345742 0.8871476964591357 0.9356140348009029 0.9376749533829473 1.0242172075220837 1.0093963688515983 1.0 11.980493362339505 -8.73873350289682 9.460917338575802 1.0114377313378764 0.9319601211698911 0.14698899928361642 0.08472799933159621 0.3485223882354573 134.87649257867548 0.012838342417139043 0.01443726484285659 1.8250152470154255e-09 8.73873350289682 -0.07947761016798527 VSDES(ph)LSKVQEAESPVFK ddPTM_A549_PD325901_60min_R1 1 VSDESLSKVQEAESPVFK 18 1 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 VS(0.017)DES(0.829)LS(0.154)KVQEAESPVFK 142.41 3.2612e-17 6500500.0 3086.4 3375.2 3814.4 3792.3 4464.3 4511.0 4106.5 4755.4 4200.2 4796.9 4456.4 True False 3399.729055912409 3659.639949265432 4073.2681218505472 4026.5417580618077 4150.742968998913 4474.263911617284 4262.775104663026 4660.549816460869 4023.6802005889476 4494.022915355923 3908.29105144713 0.8698761200636747 0.9363785606269959 1.0422120738275955 1.0302563716616993 1.062035276892188 1.1448133858814302 1.09070052576679 1.192477672494529 1.0295241955173968 1.149869049208071 1.0 11.932322193842504 -5.596311899642817 2.339280534633056 1.046294474822924 0.8686682009977174 0.4774925473612296 0.06530708795544095 0.25391099980467785 2.451584641231297 0.00947890153557222 0.06835530205844394 2.53330861692988e-06 5.596311899642817 -0.17762627382520657 VSDEVGFGLEHVS(ph)R ddPTM_A549_PD325901_60min_R1 2 VSDEVGFGLEHVSR 14 0 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VSDEVGFGLEHVS(1)R;VSDEVGFGLEHVS(1)R 86.367 3.4207e-05 7784600.0 553.07 705.39 638.17 933.02 678.6800000000001 643.65 471.58 502.16999999999996 588.6 697.22 564.28 True False 609.217259251385 764.8356908664202 681.4800538279584 990.6505263578377 631.0118581188952 638.4083278014774 489.5262349584774 492.15382540525593 563.8631889116369 653.1974102116903 494.8771372656373 1.2310474931566153 1.5455062141128497 1.3770691804300457 2.001811059269206 1.2750879169836944 1.2900339897068154 0.9891874125834031 0.9944969939904102 1.1394003611222996 1.319918341390402 1.0 8.95092658272649 -7.33252181499013 2.168962895813056 1.0581243896199475 1.525472621638824 0.4534917949444842 0.20774315739423274 0.1716933287086096 1.5775107638130996 0.028338816206860705 0.049961793368980156 4.650270168678002e-08 7.33252181499013 0.46734823201887643 VSDEVGFGLEHVS(ph)REQIR ddPTM_A549_PD325901_60min_R1 2 VSDEVGFGLEHVSREQIR 18 1 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VSDEVGFGLEHVS(1)REQIR;VSDEVGFGLEHVS(1)REQIR 107.45 1.7427e-09 8756100.0 628.27 647.36 557.55 515.75 611.87 627.33 544.92 555.1600000000001 384.0 295.14 363.97 True False 692.0515078920712 701.9152991101176 595.3886958205151 547.6067061467649 568.8943620369074 622.2212324705987 565.6572287916656 544.0868982854049 367.86181539597084 276.5048100310924 319.2039973959276 2.1680540141659903 2.198955228745117 1.8652294478694114 1.7155383723704933 1.7822281884874833 1.9492902267725076 1.7720869206097298 1.704511543477138 1.152434864215344 0.8662322912207365 1.0 8.318334908337398 -8.656631395994491 1.4120679658557576 1.046435761717708 1.9358155333059448 0.8688311912538949 0.15556918744560233 0.09618957597783104 0.3742053139808571 0.031082069750648197 0.03461223429271688 2.2047969731381144e-09 8.656631395994491 0.8893797715882368 up VSDQNS(ph)PVLPK ddPTM_A549_MK2206_60min_R1 2 VSDQNSPVLPK 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 VSDQNS(1)PVLPK;VSDQNS(1)PVLPK 203.88 2.5844e-24 371380000.0 23265.0 27408.0 24673.0 22539.5 33608.0 25148.0 22880.9 25922.0 40506.0 33965.0 39922.0 True False 27191.563225360307 28802.950130966827 28172.002405120507 28061.67851183661 28664.307720248402 27809.144668108645 27038.063354833124 29596.52288279559 31331.455674790355 26292.28291028301 30008.26560885192 0.9061357820473058 0.9598338839839665 0.938808086156444 0.935131635983617 0.9552137432358945 0.9267161598271586 0.9010205290524141 0.9862790228724557 1.0440941866879543 0.8761680282690927 1.0 14.87307231728549 -8.486696070959837 5.208830481236425 1.0206945075064002 0.934267218493838 0.0 0.047631915600523725 0.06776140304718263 4.729605459734503 0.0036828596188670758 0.004387497356068337 3.2606480865739133e-09 8.486696070959837 -0.08642728901256225 VSDQNS(ph)PVLPK ddPTM_A549_PD325901_60min_R1 2 VSDQNSPVLPK 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 VS(0.015)DQNS(0.985)PVLPK;VS(0.005)DQNS(0.995)PVLPK 158.02 2.9487e-13 625810000.0 13985.9 13850.9 15049.5 14035.3 16787.6 14106.3 15815.099999999999 15150.7 16069.3 15035.2 16300.5 True False 15405.738272124589 15018.163952737774 16070.849569995245 14902.22860452097 15608.496890075963 13991.422969728852 16416.95228485478 14848.507403005775 15393.963203496021 14085.874906076719 14295.641837383075 1.077652787287844 1.0505414253919894 1.1241782462659358 1.0424315867757452 1.0918360342002815 0.9787194677150702 1.1483886118302489 1.0386737141229265 1.076829104884318 0.9853265118353891 1.0 13.803287774252448 -10.781385717190116 0.7085184620938813 0.9924027040710722 1.0705337154796695 0.31948869863887697 0.043071847298284414 0.9139953141421973 0.6833914694476579 0.043433215553174184 0.007557871578829641 1.6543000497659624e-11 10.781385717190116 0.07813101140859724 VSDQNS(ph)PVLPKK ddPTM_A549_MK2206_60min_R1 4 VSDQNSPVLPKK 12 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 VSDQNS(1)PVLPKK;VSDQNS(1)PVLPKK;VS(0.004)DQNS(0.996)PVLPKK;VSDQNS(1)PVLPKK 124.25 2.7326999999999997e-06 52705100.0 15090.1 17943.8 16346.199999999999 15534.7 22390.8 14669.4 15077.5 13084.1 24114.1 24089.899999999998 24782.699999999997 True False 17636.939962476237 18857.062775833412 18664.336955967286 19340.702197379174 19097.142980913406 16221.706171240372 17816.886583678814 14938.811243375736 18652.294852304894 18647.974858837842 18628.471622275792 0.9467733220467809 1.012271063251602 1.0019252966329566 1.0382334412368914 1.0251588733708663 0.8708017759139495 0.9564330850617669 0.8019343479317977 1.0012788612244825 1.0010469584922215 1.0 14.185221692400388 -4.309960488467893 15.367627019740167 0.9807406638774814 0.9769110627121664 0.0 0.06988908948505025 0.0 0.0 0.009215507638921042 0.0 4.898233808185347e-05 4.309960488467893 -0.003829601165314944 VSDQNS(ph)PVLPKK ddPTM_A549_PD325901_60min_R1 2 VSDQNSPVLPKK 12 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 VSDQNS(1)PVLPKK;VSDQNS(1)PVLPKK 117.4 9.173099999999999e-06 91227000.0 9648.3 9274.4 10834.8 10473.7 11415.6 12591.9 11855.7 12600.5 12459.4 11809.7 12632.3 True False 10627.788313296947 10055.986236509632 11570.114682945241 11120.636661501447 10613.80763768205 12489.355741231142 12306.875151187976 12349.173142598984 11935.774746730618 11064.033526543988 11078.607182747415 0.9593072611011497 0.907694087409264 1.044365459672877 1.0037937511512713 0.9580453086386895 1.1273398844469067 1.1108684465636915 1.1146864347560048 1.0773714195154478 0.9986845227055146 1.0 13.435488894794785 -6.036866530942981 0.9691108376988534 1.0519327235801974 0.9258691531132917 0.3763966747379097 0.05495274761974746 0.75175978353826 1.029645809402033 0.009262850846323856 0.07422803187277252 9.186148653746379e-07 6.036866530942981 -0.12606357046690575 VSDS(ph)LTDLALK ddPTM_A549_PD325901_60min_R1 2 VSDSLTDLALK 11 0 Q8N3C0 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 1 VS(0.177)DS(0.822)LT(0.001)DLALK;VS(0.019)DS(0.95)LT(0.032)DLALK 86.911 4.7201000000000004e-05 974920.0 700.82 911.4 969.31 560.73 987.18 721.61 624.59 1091.1 1159.9 1267.4 1079.3 True False 771.9667304835838 988.2068765585778 1035.0932055345413 595.3650185897731 917.8438823861175 715.7334474090331 648.3591142387626 1069.3371545486082 1111.153436660903 1187.3761477041633 946.5529422464075 0.8155557877740184 1.044005921331051 1.0935396841913623 0.6289822703174136 0.9696698847164784 0.7561472955864658 0.6849686745466596 1.129717215828206 1.1738946519186315 1.254421273982015 1.0 9.886539390241783 -8.286575836640608 24.767490583880715 1.0879813933678932 0.8642674324209635 0.44398324910558784 0.14835990211296177 575.2393006164592 566793.8896906084 0.024070943202472304 0.029106333504087704 5.169209851802532e-09 8.286575836640608 -0.22371396094692975 VSDSPS(ph)HIATK ddPTM_A549_PD325901_60min_R1 1 VSDSPSHIATK 11 0 Q9P2D3 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B 1 VS(0.311)DS(0.27)PS(0.418)HIAT(0.001)K 44.457 0.017205 7207500.0 3362.5 3544.7 2818.1 3059.3 4120.1 3472.5 3321.5 3826.2 3142.7 3486.7 4069.5 True False 3703.8585246583298 3843.4243091257317 3009.3532126119526 3248.2660128255893 3830.718389573377 3444.2211113037065 3447.901500094542 3749.8834394041687 3010.623248033641 3266.5491669560565 3568.9772986859575 1.0377926825205734 1.0768979423155258 0.8431976335965908 0.91013916340167 1.0733378413428936 0.9650442754488283 0.9660754920923723 1.0506885097825693 0.843553487757433 0.9152619626240687 1.0 11.801295009479297 -8.750376926805195 24.988733582945216 0.9261224747585052 0.9868070861972712 0.14705394412289696 0.0751258727552385 396.03413770652463 894592.0198552335 0.01457891076280997 0.016456140357738125 1.7767367001536304e-09 8.750376926805195 0.06068461143876602 VSEDEEKLPAS(ph)PK ddPTM_A549_MK2206_60min_R1 2 VSEDEEKLPASPK 13 1 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 VSEDEEKLPAS(1)PK;VSEDEEKLPAS(1)PK 96.447 4.6398e-05 33863000.0 8736.3 9880.8 8943.1 7551.6 12434.8 8360.5 8527.2 9137.4 12344.4 11984.400000000001 12442.9 True False 10210.773857971848 10383.690515690923 10211.366056386867 9401.74233900421 10605.657392279958 9245.202560749247 10076.481862135372 10432.654432113899 9548.4131099561 9277.11571647272 9352.98452343028 1.0917129000259447 1.1102007588784746 1.0917762165441678 1.0052130756179256 1.133932956449526 0.9884761957628577 1.0773547028643797 1.1154358703341083 1.0208947834818127 0.9918882783599716 1.0 13.191211084967051 -8.34494162853872 0.14754686572816625 0.9538507071864987 1.1412981094371868 0.3310871475593413 0.043531213727529064 3.685430345678374 0.4276503777392658 0.221329424530822 0.26157894928525105 4.519166802705924e-09 8.34494162853872 0.18744740225068812 VSEDEEKLPAS(ph)PK ddPTM_A549_PD325901_60min_R1 2 VSEDEEKLPASPK 13 1 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 VS(0.001)EDEEKLPAS(0.999)PK;VSEDEEKLPAS(1)PK 131.45 1.0754e-08 60755000.0 14745.0 14735.5 13745.3 12741.900000000001 16521.3 14203.4 13904.599999999999 14808.099999999999 14225.4 15920.5 17823.4 True False 16241.901545304701 15977.312299241758 14678.138715203535 13528.938224045503 15360.90088339084 14087.732219522262 14433.747161889065 14512.740828770273 13627.555908161055 14915.27691299048 15631.234791841585 1.0390670834131313 1.0221401259726968 0.939026181275487 0.8655066860812983 0.982705530813737 0.9012552371662331 0.9233913605739243 0.928444938741814 0.8718157003996696 0.954196972383475 1.0 13.932144128309448 -5.747804039137166 4.61190151904363 0.9317012560242766 1.033960981319599 0.5003562573163347 0.03906618610768058 0.14790806080097615 7.695465577332734 0.006909266751459939 0.02665540685209642 1.7872938495214293e-06 5.747804039137166 0.10225972529532235 VSEEAESQQQWDTSKGEQVSQNGLPAEQGS(ph)PR ddPTM_A549_MK2206_60min_R1 1 VSEEAESQQQWDTSKGEQVSQNGLPAEQGSPR 32 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 VSEEAESQQQWDTSKGEQVSQNGLPAEQGS(1)PR 127.35 6.162699999999999e-30 17013000.0 1144.5 1412.1 1165.3 1406.1 1768.9 1090.8 1014.2 1050.3 1857.2 1790.1 1986.3 True False 1337.663619661503 1483.9698584332389 1330.5570624847776 1750.5945631222266 1508.69715324766 1206.2277319855605 1198.4670119825605 1199.1832414088492 1436.5471653389775 1385.7151667215562 1493.0468909088365 0.8959287399521995 0.9939204638977732 0.8911689717091542 1.172498046633095 1.0104820970018544 0.807896750818934 0.8026988430705203 0.8031785530050508 0.9621581037314462 0.9281122884747804 1.0 10.54404376039531 -5.232704753867401 21.062099033409122 0.9570671854283096 0.8959280443380269 0.0 0.107633636122524 4159.405131333024 3048360.927099907 0.015280251763899404 1.411507620899554 5.8518777676982e-06 5.232704753867401 -0.061139141090282734 VSEEAESQQQWDTSKGEQVSQNGLPAEQGS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VSEEAESQQQWDTSKGEQVSQNGLPAEQGSPR 32 1 A0A087WUZ3;Q01082;Q01082-2;Q01082-3 A0A087WUZ3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 VSEEAESQQQWDTSKGEQVS(0.02)QNGLPAEQGS(0.98)PR;VSEEAESQQQWDTSKGEQVSQNGLPAEQGS(1)PR 129.89 4.9795e-30 65890000.0 4034.1000000000004 4392.7 4196.5 4525.299999999999 4089.2 4670.9 4575.6 4266.200000000001 5184.3 4768.1 5680.7 True False 4443.638862252542 4762.888245181989 4481.299725604505 4804.8175032980225 3801.988698974163 4632.861739031959 4749.726961864393 4181.107294230846 4966.421899888887 4467.041352270965 4982.0099129242735 0.891936977227786 0.9560174163496059 0.8994963486481967 0.9644335493659737 0.7631435435547985 0.9299182097196237 0.9533756545812375 0.8392410628056489 0.9968711396990705 0.8966343765560597 1.0 12.282512176837477 -8.79153250487516 23.23276082059105 0.9985225629543992 0.9019691224870998 0.1139142903632876 0.06320747224167979 65.31767357060674 50426.68158206983 0.009049084843615756 0.009634456168208058 1.6160972643907417e-09 8.79153250487516 -0.09655344046729941 VSEEDQS(ph)LENSEADVK ddPTM_A549_PD325901_60min_R1 2 VSEEDQSLENSEADVK 16 0 H0Y8C9;H0Y8D6;J3QSS3;A0A087WXK5;Q9BZC7-2;Q9BZC7;Q9BZC7-3 H0Y8C9 ABCA2 ATP-binding cassette sub-family A member 2 1 VSEEDQS(0.999)LENS(0.001)EADVK;VSEEDQS(0.999)LENS(0.001)EADVK 103.39 1.057e-06 2587900.0 1085.52 1156.78 1655.17 1462.1599999999999 1334.08 1330.02 1315.43 1306.07 2490.2 1809.17 1379.21 True False 1195.7211912824125 1254.2659103197639 1767.499789545766 1552.4743023937056 1240.378823126149 1319.188758086725 1365.4894084809162 1280.0194092579054 2385.5455539037675 1694.938697445116 1209.5759135325377 0.9885458018011761 1.0369468309406973 1.4612557754922755 1.2834864558932406 1.02546587547668 1.0906208889643525 1.1288993052887741 1.0582381766512192 1.9722164828306132 1.401266905600896 1.0 10.240285601015966 VSEEENLKKT(ph)PK ddPTM_A549_MK2206_60min_R1 2 VSEEENLKKTPK 12 2 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 VSEEENLKKT(1)PK;VSEEENLKKT(1)PK 104.45 6.1641e-05 344720000.0 14962.699999999999 17073.4 16941.9 14774.7 21328.7 16645.8 17086.7 16241.7 21212.3 21415.3 22580.4 True False 17488.037957107175 17942.36313361241 19344.516173441065 18394.50216326149 18191.276483958045 18407.247507412212 20191.132216172762 18544.010713120162 16407.747919082474 16577.56885642821 16973.063492663685 1.0303406903925199 1.0571081137690723 1.13971860069942 1.083746736186558 1.0717733125679352 1.084497652139723 1.1895985792370383 1.092555313961766 0.9666933683583073 0.9766986886953896 1.0 14.050959362037096 -8.75482283678506 24.815858780867387 0.9842718667812042 1.0958153478693355 0.6051724091485118 0.04043411308082396 69.41113068571508 260331.45581129572 0.0070771292578646885 0.007933963239176531 1.7586408759639679e-09 8.75482283678506 0.11154348108813139 VSEEENLKKT(ph)PK ddPTM_A549_PD325901_60min_R1 2 VSEEENLKKTPK 12 2 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 VSEEENLKKT(1)PK;VSEEENLKKT(1)PK 113.29 1.2604000000000002e-05 362470000.0 20590.0 19947.4 20806.5 18844.4 22434.0 21978.0 23325.0 22390.0 22463.0 20863.0 24680.0 True False 22680.28164244312 21628.437403406388 22218.554209648562 20008.37578926242 20858.313233098506 21799.018454782676 24212.64563892974 21943.413885384794 21518.95822718671 19545.706619498134 21644.51645941012 1.0478534683357499 0.9992571302743638 1.026521163053697 0.9244085367665317 0.9636765631708162 1.0071381587878063 1.1186503373422836 1.0138093833851727 0.9941990742801362 0.9030327222209895 1.0 14.401713950513056 -5.259339455184676 22.090060266571783 1.0017214252506705 1.0478535471072277 0.06187645266579489 0.05367633111008808 77.86412970781956 818734.0779441453 0.006102102687403811 0.054698737298048736 5.503773398542708e-06 5.259339455184676 0.04613212185655713 VSELKEELK ddPTM_A549_MK2206_60min_R1 2 VSELKEELK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 51.43600000000001 0.026327 5847800.0 3665.0 4421.6 4628.799999999999 4269.8 5590.4 4566.4 4630.9 4513.8 6509.700000000001 5587.5 6121.1 False True 4283.562399352913 4646.640553819429 5285.233442743961 5315.901191678604 4768.059565558097 5049.613417069001 5472.274586659476 5153.644972932748 5035.263343854806 4325.279869312713 4601.061936234241 0.9309942919087965 1.0099061082456309 1.1486986082760022 1.1553639714812067 1.0362954534492825 1.0974886856667438 1.1893503418339728 1.1200990215643065 1.0943698245401015 0.940061213966782 1.0 12.16775116177192 -4.396360170300575 16.277264455476974 1.0664771835195304 1.0761342221254435 0.0 0.08379688733373505 0.0 0.0 0.010569034331123989 0.0 4.014577347156178e-05 4.396360170300575 0.00965703860591316 VSELKEELK ddPTM_A549_PD325901_60min_R1 2 VSELKEELK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 65.5 0.0058549 12160400.0 6685.9 7057.5 7242.6 7101.9 8308.0 8093.299999999999 7598.3 7282.0 8081.9 7887.299999999999 7919.8 False True 7364.647646100559 7652.260293298407 7734.126389291836 7540.568233414853 7724.47474104405 8027.390848125063 7887.457464449304 7136.754797381516 7742.245848564311 7389.294531944961 6945.714807748634 1.060315295106065 1.1017239413230087 1.1135105030030388 1.0856432263822007 1.1121209198550208 1.1557328612412523 1.135586139478411 1.0275047270037287 1.1146794912925402 1.0638637975318925 1.0 12.761907459290292 -10.88627153503757 0.6321887329503203 0.9813956049584116 1.1042591081190396 0.2741870510231943 0.03787658448297052 0.6982184223872788 0.3699663893486802 0.049929129973214484 0.006793105887665236 1.2993569237943376e-11 10.88627153503757 0.122863503160628 VSELKEELKK ddPTM_A549_PD325901_60min_R1 1 VSELKEELKK 10 2 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 43.501999999999995 0.022212 4476400.0 5947.3 5507.3 5847.1 5603.9 6711.9 6394.1 6330.5 6641.7 7051.2 6224.5 6939.6 False True 6551.065517829143 5971.419498871028 6243.919367468629 5950.040175619692 6240.479298797976 6342.028569557096 6571.410641682523 6509.226083187143 6754.862585208512 5831.484007720184 6086.073193748878 1.0764026835165024 0.9811613020041209 1.0259356351287194 0.9776484748377807 1.0253703989639316 1.04205591481731 1.0797455818362725 1.069528064478898 1.1098884896991643 0.958168563222311 1.0 12.571295969093557 -7.292515117120168 3.1053779046974475 1.056725839877115 1.0128459437113837 0.036419984000924055 0.045773471552535326 0.3687620777927504 7.214977280763464 0.006908039497410652 0.01183747522200908 5.0989984843975407e-08 7.292515117120168 -0.0438798961657314 VSEPVEIGIQVTPDEDDHLLS(ph)PTK ddPTM_A549_PD325901_60min_R1 1 VSEPVEIGIQVTPDEDDHLLSPTK 24 0 Q9C0K0-2;Q9C0K0 Q9C0K0-2 BCL11B B-cell lymphoma/leukemia 11B 1 VSEPVEIGIQVT(0.015)PDEDDHLLS(0.835)PT(0.15)K 79.875 5.9e-06 1132900.0 453.38 484.46 463.59 619.97 627.16 280.35 589.68 502.93 561.12 400.23 621.38 True False 499.4068038392841 525.287144412518 495.05200519313536 658.2641388459714 583.1104451845434 278.06692254974644 612.120595085277 492.8986666090475 537.5380777473626 374.9594094963208 544.9541992523602 0.9164197734863516 0.9639106279631866 0.9084286456959368 1.2079256197109125 1.070017344548461 0.510257417836646 1.1232514510853655 0.9044772336560956 0.9863912939561307 0.6880567394668018 1.0 9.089991173264076 -8.971347786331306 22.50395889476646 0.9939962879897144 0.9527726086692128 0.0 0.1914327756136182 310.3738810465989 243777.65756680773 0.028385405051183043 0.029758579373975674 1.0681991146241676e-09 8.971347786331306 -0.04122367932050164 VSESEGKLEGQATAVT(ph)PNK ddPTM_A549_MK2206_60min_R1 2 VSESEGKLEGQATAVTPNK 19 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 VSESEGKLEGQAT(0.002)AVT(0.998)PNK;VSESEGKLEGQAT(0.005)AVT(0.995)PNK 186.55 6.3104e-44 23582000.0 7963.8 8151.8 9199.400000000001 6860.700000000001 10876.9 7976.599999999999 8279.8 7375.4 12128.0 11609.2 12741.9 True False 9307.894743783549 8566.69180084703 10504.013250341091 8541.571807988526 9276.922418542306 8820.67851756145 9784.132484532833 8420.885536215208 9381.027364436315 8986.67365706044 9577.734571450077 0.9718263410148279 0.8944382136442965 1.096711667250847 0.8918154647394165 0.9685925569701576 0.9209566679634964 1.0215497633122972 0.8792147530708067 0.9794620319088692 0.9382880252130281 1.0 13.225468739263068 -8.986075723411913 22.453985077199217 0.9909392986459101 0.955876822253922 0.0 0.062079691381537294 51.206634861480566 82579.50002057051 0.00970011089340625 0.00977812298070344 1.0325813495940663e-09 8.986075723411913 -0.03506247639198812 VSESEGKLEGQATAVT(ph)PNK ddPTM_A549_PD325901_60min_R1 2 VSESEGKLEGQATAVTPNK 19 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 VSESEGKLEGQAT(0.015)AVT(0.985)PNK;VSESEGKLEGQAT(0.001)AVT(0.999)PNK 157.88 6.3994e-27 42111000.0 10094.5 10243.9 11426.7 10502.7 12797.7 11423.2 10264.1 11817.099999999999 12063.7 11450.3 13254.0 True False 11119.28620882187 11107.189403970171 12202.184576329095 11151.427925637669 11898.83370166821 11330.173246549883 10654.70594223104 11581.398670164392 11556.704641646813 10727.326103879572 11623.842024028429 0.9565930254245062 0.9555523363970149 1.0497548530946252 0.959358179729714 1.0236575546253406 0.9747356530765402 0.9166251502907539 0.9963485950878979 0.9942241659648479 0.9228726682369213 1.0 13.504799380552706 -8.468980088243576 24.99832108183847 0.9971681559786294 0.9780308183979313 0.0 0.040291759687828915 701.2780319885851 325254.64424132265 0.005350581858319709 0.006468519983591804 3.396408442612757e-09 8.468980088243576 -0.019137337580698133 VSFELFADKVPK ddPTM_A549_MK2206_60min_R1 2 VSFELFADKVPK 12 1 P62937;F8WE65;C9J5S7 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 134.99 4.0336e-08 15807900.0 3645.1000000000004 3722.6 3762.8999999999996 3503.0 5323.2 3617.3999999999996 3273.9 3764.0 5168.5 5174.0 5127.5 False True 4260.303765861203 3912.064439489824 4296.535802303244 4361.235157255645 4540.1643316004 4000.190866964218 3868.7252519519875 4297.558526766551 3997.8430023985075 4005.189806500937 3854.2002381991924 1.1053664839820971 1.0150132836164392 1.1147671466884463 1.1315538601319157 1.177978322610896 1.0378783196882466 1.0037686193905644 1.1150324999135255 1.0372691493232924 1.0391753305407638 1.0 11.91221581092796 -8.863610969510189 0.5367242891147612 1.003680870569734 1.0979379748989888 0.23634341329033715 0.05005407036977307 0.6450674052732774 0.4294756923244522 0.019323523659897167 0.017362028654762714 1.368954552894219e-09 8.863610969510189 0.09425710432925483 VSFELFADKVPK ddPTM_A549_PD325901_60min_R1 2 VSFELFADKVPK 12 1 P62937;F8WE65;C9J5S7 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 142.91 9.9077e-12 32323000.0 3576.2 4449.4 4353.7 4580.2 5264.9 5365.6 4717.0 5695.700000000001 4911.2 4669.6 4765.9 False True 3939.2531913407033 4824.36655317066 4649.1682629249 4863.108551611076 4895.1115869189725 5321.904332559013 4896.508016241443 5582.094795309788 4704.799343158051 4374.760659081079 4179.724513529281 0.9424671838035737 1.1542307483554834 1.1123145192646273 1.1634997799184519 1.1711565130845507 1.273266770413368 1.1714906091040254 1.3355173952831578 1.1256242673241177 1.0466624402925335 1.0 12.0291921417858 -9.937602540359226 1.0811368229565137 1.0184333299544164 1.1660811551482488 0.23749847619662112 0.09376535716945514 0.4079986238406748 0.9658101076854694 0.030970751067961537 0.017825258710114197 1.1545093637223605e-10 9.937602540359226 0.14764782519383246 VSGAGFS(ph)PSSK ddPTM_A549_MK2206_60min_R1 2 VSGAGFSPSSK 11 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VS(0.002)GAGFS(0.986)PS(0.012)SK;VSGAGFS(0.5)PS(0.5)S(0.001)K 141.58 3.1203000000000006e-11 189158000.0 16188.0 17885.4 17093.9 15767.6 20585.0 15780.6 16100.5 14416.099999999999 23179.9 24048.4 24909.0 True False 18920.138641398356 18795.690465279993 19518.072059047918 19630.66270783447 17556.973768784614 17450.4926176855 19025.752441752316 16459.62632245464 17929.68966069404 18615.84973766084 18723.407846573133 1.010507210890096 1.003860548213187 1.0424422850255985 1.0484556480687564 0.9377018282490702 0.9320147678607231 1.0161479468725305 0.8790935099705781 0.9576082413851619 0.9942554202849361 1.0 14.192555423226086 -6.7564741535301 24.999967735770387 0.9684438214436434 1.025864280943067 0.4056232768553596 0.03791852419039055 115.50210463624589 581547.3893989495 0.005641102083130523 0.011461007326764739 1.7519666971199368e-07 6.7564741535301 0.05742045949942354 VSGEEELHTGPPAPQGPLS(ph)VPQGLPTQSLASPPAR ddPTM_A549_PD325901_60min_R1 1 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR 35 0 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 1 VSGEEELHTGPPAPQGPLS(0.293)VPQGLPT(0.264)QS(0.221)LAS(0.221)PPAR 65.378 0.00021964 13042000.0 934.5 679.17 957.06 851.42 929.86 733.8 1175.8 1117.5 1118.2 1031.0 913.63 True False 1029.3697520574603 736.4060394473221 1022.0118468693076 904.0102796848828 864.5498414428531 727.8241760906142 1220.5457124224483 1095.2105858382092 1071.2059426452463 965.9024840484399 801.2593019777491 1.2846899243686356 0.9190608304073978 1.2755069979801479 1.1282368609681201 1.0789888358348962 0.9083503608558741 1.5232842968684097 1.3668616178743882 1.3369029726097252 1.2054805250488847 1.0 9.64612539013546 VSGEEELHTGPPAPQGPLSVPQGLPT(ph)QSLASPPAR ddPTM_A549_MK2206_60min_R1 1 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR 35 0 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 1 VSGEEELHTGPPAPQGPLS(0.033)VPQGLPT(0.354)QS(0.354)LAS(0.259)PPAR 87.21 8.285100000000002e-09 8623300.0 427.55 450.19 368.79 339.37 783.54 379.4 416.78 316.26 639.13 592.58 828.1 True False 499.70998740609474 473.10274808303944 421.08996745366943 422.51566523489845 668.2823039491612 419.5478561746624 492.50353111229657 361.09082350562977 494.3680754808853 458.7157664353164 622.4599156026824 0.8027986620186813 0.760053356407647 0.6764933080806639 0.678783733127309 1.0736150026658542 0.6740158613562207 0.7912212799043316 0.5801029342684854 0.794216724786567 0.7369402509897774 1.0 9.281837125070776 -10.22412036849047 0.8522037995182329 0.9889734106227652 0.7587977010055265 0.0 0.1407029917532795 0.4622569010909118 0.654273441134502 0.05820277718319284 0.022906265459859528 5.9686983599393e-11 10.22412036849047 -0.23017570961723877 VSGEEELHTGPPAPQGPLSVPQGLPTQSLAS(ph)PPAR ddPTM_A549_MK2206_60min_R1 1 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR 35 0 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 1 VSGEEELHTGPPAPQGPLS(0.004)VPQGLPT(0.151)QS(0.178)LAS(0.667)PPAR 69.477 0.00011012 7438300.0 416.48 856.29 517.26 629.25 611.9 468.42 497.35 433.15 816.38 598.14 1012.8 True False 486.77164204160994 899.8715034896957 590.615245980328 783.4162782481062 521.8903205790285 517.9878934879687 587.7120571973244 494.55033896624127 631.4712334909727 463.0197585737284 761.293808142007 0.6394005006156711 1.1820291901308084 0.7758046100778982 1.0290590437876943 0.6855307569790169 0.6804047109645563 0.7719911168484064 0.6496182336924917 0.8294711276217053 0.608201135516604 1.0 9.572309534101723 -10.28491300160887 0.9841276684193732 0.9870580524492946 0.8121335356812354 0.0 0.19514017293433558 0.6840719632820829 1.2996570773818337 0.06900983534417665 0.028809366576788828 5.189039759846063e-11 10.28491300160887 -0.1749245167680592 VSGEEELHTGPPAPQGPLSVPQGLPTQSLAS(ph)PPAR ddPTM_A549_PD325901_60min_R1 1 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR 35 0 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 1 VSGEEELHTGPPAPQGPLS(0.009)VPQGLPT(0.042)QS(0.125)LAS(0.824)PPAR 82.791 2.0209e-06 14009000.0 617.2 751.86 556.18 950.9 987.91 815.52 633.94 1134.6 856.17 901.19 984.22 True False 679.8576896413745 815.2218808528993 593.9257193820358 1009.6349333494117 918.5226097044808 808.8786755047945 658.0649336052791 1111.9695129235192 820.188152311376 844.2887096019523 863.1671794846284 0.7876315339599652 0.9444542149293075 0.6880772734392558 1.169686426159339 1.0641306012734446 0.9371054585135548 0.7623841003757699 1.2882435052586723 0.9502077602175353 0.9781288372271663 1.0 9.753496199532353 -6.253274870972508 24.870211523330912 0.9967902438847284 0.8204943427749186 0.304021832474361 0.13960663539690119 609.5894175312864 1856887.1696550704 0.018237736534607682 0.04735087092614753 5.581168430739429e-07 6.253274870972508 -0.17629590110980975 VSGGLEVLAEK ddPTM_A549_PD325901_60min_R1 2 VSGGLEVLAEK 11 0 P39687;H0YN26;O43423 P39687 ANP32A;ANP32C Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member C 0 ; 162.36 4.4786e-13 7272400.0 5302.9 5595.4 5585.7 5377.1 6307.5 5678.9 5544.9 6286.0 6750.299999999999 6531.7 6584.6 False True 5841.246504211349 6066.943995058008 5964.779191542736 5709.231254719867 5864.482959693715 5632.652921233296 5755.914203785705 6160.6207987284 6466.608365800578 6119.287347293102 5774.735943218469 1.0115175068863513 1.0506011105464816 1.0329094265422547 0.9886566781333911 1.0155413195265905 0.9753957543024928 0.9967406753109 1.0668229438201573 1.1198102267160122 1.0596653089357713 1.0 12.49553926372431 -8.265858531439145 24.64759995129061 1.0589263233501744 1.0106612192179858 0.37232581860525826 0.03202048401028323 398.60309332094255 2223185.3045571484 0.007669863737292537 0.009421673203672425 5.421774723727597e-09 8.265858531439145 -0.04826510413218865 VSGGT(ph)PIKIEDPNQFVPLNTNPNEVLEK ddPTM_A549_PD325901_60min_R1 2 VSGGTPIKIEDPNQFVPLNTNPNEVLEK 28 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 VS(0.372)GGT(0.628)PIKIEDPNQFVPLNTNPNEVLEK;VS(0.08)GGT(0.92)PIKIEDPNQFVPLNTNPNEVLEK 109.25 2.2601999999999995e-15 17549300.0 5499.299999999999 5021.8 6478.799999999999 5082.7 6353.6 5227.5 6084.3 5937.2 5797.0 5866.4 6288.6 True False 6057.584887629311 5445.004710008634 6918.490328189318 5396.646835350776 5907.345054730076 5184.928973172105 6315.8413659567095 5818.7778883567 5553.37224961053 5495.994502833914 5515.142066719874 1.0983551854779428 0.9872827651830638 1.2544536921247587 0.978514564097245 1.0711138504258813 0.9401260947491489 1.1451819897928852 1.0550549410991716 1.0069318582238072 0.9965281830178951 1.0 12.429182333908011 -7.768008773200186 0.3100632230003596 0.9920485968447068 1.0989114979766317 0.11071087113039979 0.08140820157296924 2.734833546913377 0.6132585294814853 0.048107934839601116 0.1041796978791989 1.7060479247127076e-08 7.768008773200186 0.10686290113192487 VSGLGEK ddPTM_A549_PD325901_60min_R1 2 VSGLGEK 7 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 96.25299999999999 0.032663 10194100.0 6611.299999999999 6618.8 7000.4 6335.6 7436.200000000001 7725.0 7152.6 7428.200000000001 7874.5 7846.6 8500.4 False True 7282.474309018178 7176.589504680623 7475.489240824918 6726.935622808419 6913.906965497329 7662.09016121559 7424.796107052904 7280.038723689832 7543.562149311384 7351.164336890863 7454.904688475266 0.9768702100613503 0.9626668354023495 1.0027612093259186 0.9023503188723212 0.9274306318343305 1.0277918338863028 0.9959612385831159 0.9765435009443161 1.0118925009159643 0.9860842819701265 1.0 12.863974192322639 -7.263807327924826 24.998776672143734 1.0039054057114956 0.9546675544971142 0.40314229014455416 0.027182671653177237 153.39235041525848 1619389.2627155094 0.003982049664339764 0.006562725644777191 5.4474427168704044e-08 7.263807327924826 -0.0492378512143814 VSGLPTPDLSWQLDGKPVRPDS(ph)AHK ddPTM_A549_MK2206_60min_R1 3 VSGLPTPDLSWQLDGKPVRPDSAHK 25 2 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 1 VSGLPTPDLSWQLDGKPVRPDS(1)AHK;VSGLPTPDLSWQLDGKPVRPDS(1)AHK;VSGLPTPDLS(0.001)WQLDGKPVRPDS(0.999)AHK 97.639 1.6424e-09 13972700.0 2020.0 2550.69 2475.57 1852.56 3292.7899999999995 2637.87 1925.6599999999999 2097.68 3677.6 3250.98 3832.74 True False 2360.926615741578 2680.5092261221457 2826.6430508671083 2306.437283164578 2808.4249529325366 2917.007652523607 2275.52749585322 2395.0325638755758 2844.629471920429 2516.5813600963324 2880.964879757303 0.8194916336295173 0.9304206534957676 0.9811445709484765 0.8005780630546512 0.9748209610834001 1.012510660237323 0.7898490925182378 0.8313300105474861 0.9873877643937349 0.873520318758045 1.0 11.492336358173128 -8.864714719709559 8.687973152572619 0.9943996201563167 0.8970651151904531 0.03971843529358776 0.08166288514043872 0.2545073637385488 19.51490001786978 0.012546836152345663 0.01333777222238847 1.3654798013547776e-09 8.864714719709559 -0.0973345049658636 VSGLPTPDLSWQLDGKPVRPDS(ph)AHK ddPTM_A549_PD325901_60min_R1 4 VSGLPTPDLSWQLDGKPVRPDSAHK 25 2 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-7 Q8WX93-4 PALLD Palladin 1 VSGLPTPDLSWQLDGKPVRPDS(1)AHK;VSGLPTPDLSWQLDGKPVRPDS(1)AHK;VSGLPTPDLSWQLDGKPVRPDS(1)AHK;VSGLPTPDLSWQLDGKPVRPDS(1)AHK 149.57 4.5788e-33 20740000.0 5789.5 5806.76 5643.639999999999 6270.27 6833.58 7415.08 6401.42 6649.58 6914.25 6778.78 7798.54 True False 6377.245777995365 6296.11604402599 6026.651348364261 6657.570337083618 6353.612915371188 7354.694046941939 6645.029541091432 6516.948910405404 6623.668117452059 6350.766673926165 6839.369019018155 0.9324318895883861 0.9205697231014224 0.8811706652479229 0.9734187932499312 0.9289764739559702 1.0753468670122674 0.9715851743945494 0.9528582084522415 0.9684618711219852 0.9285603183958434 1.0 12.739647516918936 -6.623119857454631 1.993109080635165 0.9859042906635731 0.9141638257262964 0.29591867105456904 0.04060350149799196 0.23885131451134953 1.908509864749678 0.005250314794079546 0.01320602826946313 2.3816620828123254e-07 6.623119857454631 -0.0717404649372767 VSGRRS(ph)PESCSKPEK ddPTM_A549_MK2206_60min_R1 1 VSGRRSPESCSKPEK 15 3 Q03111 Q03111 MLLT1 Protein ENL 1 VS(0.181)GRRS(0.819)PESCSKPEK 56.528999999999996 0.0021041999999999996 10980000.0 958.27 1233.2 1138.5 786.99 1361.9 723.73 678.65 693.62 1241.8 1956.0 1645.3 True False 1120.002548547862 1295.9646125769218 1299.9564194961981 979.8025853293241 1161.566314098021 800.3146282269073 801.9519204121127 791.9427591221619 960.5342827471151 1514.1382414990012 1236.7266020300603 0.9056185471464766 1.0478990347984942 1.0511267545812852 0.7922547988544913 0.9392264322537694 0.6471233229019315 0.6484472146840908 0.6403539455059871 0.7766747162795872 1.2243112091335107 1.0 10.272310889673467 -6.261533088054655 24.999999828290058 0.8367413018656944 1.0061832090878833 0.16241891719647572 0.1697069957688754 10.78475367749569 2877764.118765791 0.021553934078769738 0.053210811245669454 5.476043784565243e-07 6.261533088054655 0.16944190722218888 VSGRRS(ph)PESCSKPEK ddPTM_A549_PD325901_60min_R1 1 VSGRRSPESCSKPEK 15 3 Q03111 Q03111 MLLT1 Protein ENL 1 VS(0.035)GRRS(0.965)PESCSKPEK 118.46 1.3259e-07 20468000.0 3426.7 3137.8 3569.1 3703.5 3419.9 4702.6 3634.8 4933.4 3411.8 4045.7 4134.0 True False 3774.576061396789 3402.2334181100578 3811.320588741817 3932.256783741239 3179.698022014513 4664.303584742059 3773.1243030388805 4834.999466822571 3268.4139108540994 3790.2538115565176 3625.544207585145 1.0411060644357468 0.9384062704275155 1.0512409642580007 1.0845976655075418 0.8770264103695495 1.286511298078695 1.0407056394857845 1.3335927491125543 0.9014960854748705 1.0454303118485708 1.0 11.823981849901722 VSGRS(ph)PPGGPEPQDKGPDGLSFYGDR ddPTM_A549_PD325901_60min_R1 1 VSGRSPPGGPEPQDKGPDGLSFYGDR 26 2 B0QYC3;B0QYC4;Q9BWT7-2;Q9BWT7 B0QYC3 CARD10 Caspase recruitment domain-containing protein 10 1 VS(0.238)GRS(0.762)PPGGPEPQDKGPDGLSFYGDR 49.623000000000005 0.0019512999999999998 8090700.0 1864.3 2281.9 2309.3 2204.5 2082.5 2670.7 2105.6 2350.9 3043.3 2608.0 2589.9 True False 2053.5623635748766 2474.2037213287454 2466.0229849490033 2340.666958217244 1936.2323842349836 2648.9507046677622 2185.7297602285316 2304.009455254628 2915.40068436083 2443.330434915935 2271.3587187287785 0.9041118633714551 1.089305577726399 1.0857038849104264 1.0305139997997566 0.8524555669122328 1.1662405778644742 0.9623005570215826 1.0143749801634694 1.28354920793511 1.0757131468354786 1.0 11.149339855463595 -8.62647159262832 22.239006154471166 1.1346957490597545 1.016681053533006 0.1680391738125644 0.10400373230399694 6.8476295435106 1449.8206765232494 0.021013766413118102 0.023827373527246343 2.363351981874471e-09 8.62647159262832 -0.11801469552674848 VSGRT(ph)SPPLLDR ddPTM_A549_MK2206_60min_R1 3 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VS(0.056)GRT(0.56)S(0.384)PPLLDR;VS(0.022)GRT(0.489)S(0.489)PPLLDR;VS(0.016)GRT(0.492)S(0.492)PPLLDR 100.11 0.00094777 108824900.0 13279.390000000001 14629.7 11855.77 11317.0 15903.27 11008.49 11479.150000000001 10889.88 18229.46 17122.56 18119.78 True False 15520.626382085415 15374.289241499024 13537.096459877414 14089.665508039434 13563.920049934379 12173.401104955748 13564.762966475653 12433.55383885881 14100.51641646579 13254.561803865621 13620.138545512813 1.139535132496778 1.1287909583389752 0.9939029925901336 1.0344729945996993 0.9958723991396581 0.8937795356689895 0.9959342866555932 0.9128801294723301 1.0352696758074638 0.9731591025725923 1.0 13.733453758223051 -5.752125466774861 8.31158017827735 0.9991072138697173 1.1347872714518359 0.6176119437018328 0.04458297234424875 0.07375353530441514 36.074376175448286 0.006437575184319715 0.02318326844509487 1.7695976513728377e-06 5.752125466774861 0.13568005758211854 VSGRT(ph)SPPLLDR ddPTM_A549_PD325901_60min_R1 3 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VSGRT(0.5)S(0.5)PPLLDR;VS(0.027)GRT(0.594)S(0.38)PPLLDR;VSGRT(0.5)S(0.5)PPLLDR 86.43 0.00031771 228910000.0 19844.899999999998 25500.300000000003 15948.1 22471.1 21113.0 21266.2 20265.800000000003 19961.5 25413.600000000002 19894.5 20811.800000000003 True False 21859.539638956754 27649.29977431062 17030.433969716003 23859.08881142912 19630.095715895884 21093.015117986128 21037.026108871276 19563.352223006197 24345.554770174596 18638.35787478338 18252.08053686998 1.1976464597994487 1.514857427812564 0.9330680924464365 1.3071983088849923 1.075499073995551 1.1556499038768395 1.1525823626723313 1.071842313181086 1.3338509394036224 1.0211634688512965 1.0 14.155773304317151 -11.079456963520933 1.4033462626753506 1.0000828355001052 1.2074747278639297 0.1824263140375103 0.14696314160304283 0.5247242268270963 1.8465099855045048 0.10161810298934702 0.022395906604531828 8.328044487824346e-12 11.079456963520933 0.2073918923638245 VSGRTS(ph)PPLLDR ddPTM_A549_MK2206_60min_R1 2 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VSGRT(0.185)S(0.815)PPLLDR;VS(0.003)GRT(0.236)S(0.761)PPLLDR 95.76100000000001 7.2011e-05 1518756000.0 10453.900000000001 12453.1 10086.2 10073.0 13357.400000000001 11895.8 10164.8 10625.5 16962.4 17099.8 17111.5 True False 12218.2627466836 13086.9095985093 11516.574825052754 12540.885452194152 11392.54415444079 13154.605660207037 12011.612584697617 12131.697164229015 13120.44348338675 13236.94330367312 12862.242296625163 0.9499325595731832 1.0174671955871246 0.8953784697458631 0.9750154882002705 0.8857354644477504 1.0227303573389055 0.933866141508566 0.9432023502940984 1.020074352574538 1.0291318572925867 1.0 13.650854551626487 -8.761155980066327 24.999998771309524 1.0094795574520712 0.953339237249777 0.3196361203260809 0.04090898279650486 6.585999031859281 580983.0995453679 0.0063525891423712125 0.006987266676822517 1.7331814010724101e-09 8.761155980066327 -0.0561403202022942 VSGRTS(ph)PPLLDR ddPTM_A549_PD325901_60min_R1 5 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VSGRT(0.211)S(0.788)PPLLDR;VSGRT(0.072)S(0.928)PPLLDR;VSGRT(0.44)S(0.56)PPLLDR;VS(0.001)GRT(0.276)S(0.723)PPLLDR;VS(0.031)GRT(0.355)S(0.613)PPLLDR 119.63 1.4052999999999999e-05 6815709000.0 41936.59999999999 48138.6 38610.899999999994 47101.7 46111.9 44060.5 43836.5 44557.200000000004 49025.1 41541.299999999996 46353.0 True False 46193.972759906756 52195.408764431406 41231.267860203254 50011.06503327791 42873.15922141905 43701.68589621221 45504.7219957532 43668.4716915528 46964.745536377624 38918.37522851739 40651.87485587671 1.1363306839765317 1.2839606770777496 1.0142525530834843 1.2302277622024171 1.0546416216574874 1.075022641665311 1.11937572761604 1.0742056017433597 1.1552910094031816 0.957357449477912 1.0 15.311034270174508 -14.999999999986839 0.25153603337245983 0.1768379187870502 1.143555046496987 0.3769080723794249 0.07397189566669526 39.24361595651616 0.5055837934274526 16.155752374254767 0.0352355012098593 1.0000000000303044e-15 14.999999999986839 0.9667171277099368 VSGS(ph)PEQAVEENLSSYSLDRR ddPTM_A549_PD325901_60min_R1 2 VSGSPEQAVEENLSSYSLDRR 21 1 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 VS(0.12)GS(0.88)PEQAVEENLSSYSLDRR;VS(0.132)GS(0.868)PEQAVEENLSSYSLDRR 137.89 2.0174e-18 18924800.0 1999.99 2173.9 1911.4099999999999 2006.8899999999999 2765.2 2402.31 2624.5 2335.8 2122.5 2659.0 2443.9 True False 2203.02751248518 2357.102182302714 2041.1297768420613 2130.851037322115 2570.981891422126 2382.7463838433428 2724.3767836815045 2289.210636600348 2033.2987061925724 2491.1102862122216 2143.315793158525 1.0278595060593754 1.099745632363927 0.9523233969335541 0.9941843587043041 1.1995348047304617 1.1117103655229348 1.2711037693921394 1.0680696908535459 0.9486696793271772 1.1622693651415523 1.0 11.065628715011997 -8.66300822599899 5.747736195817342 0.9759488395426582 1.0946631104404896 0.0 0.10157676510944416 0.208013509335166 10.234017214840712 0.015107203655904015 0.017102509533625992 2.1726600259843394e-09 8.66300822599899 0.11871427089783138 VSGTLDT(ph)PEK ddPTM_A549_PD325901_60min_R1 2 VSGTLDTPEK 10 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VSGT(0.001)LDT(0.998)PEK;VSGT(0.001)LDT(0.999)PEK 170.23 2.0536999999999998e-10 138202000.0 19337.4 23572.3 20836.5 22690.4 24628.0 21844.3 21918.9 21875.6 20472.4 23024.3 28159.0 True False 21300.518612558524 25558.820447994032 22250.590190053215 24091.934474362697 22898.214241987596 21666.40726325457 22753.03573398231 21439.273996923774 19612.01622268874 21570.541768648367 24695.621514608152 0.862522070965441 1.0349535213307053 0.9009933269705874 0.9755548958389908 0.9272175728982023 0.8773380030317633 0.9213388584095059 0.8681406938570808 0.7941495301540673 0.873456120790027 1.0 14.591967657023039 -7.023937279423187 7.402196941883117 0.89774142357583 0.9475868054181112 0.14158103087043494 0.0613858901382037 0.42929001880479717 102.39234148641803 0.011896658993330138 0.021185281252796524 9.463738262988847e-08 7.023937279423187 0.04984538184228127 VSGTLDT(ph)PEKTVDSQGPTPVCTPTFLER ddPTM_A549_MK2206_60min_R1 2 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VSGT(0.003)LDT(0.996)PEKTVDSQGPTPVCTPTFLER;VS(0.003)GT(0.002)LDT(0.988)PEKT(0.007)VDS(0.001)QGPTPVCTPTFLER 127.72 2.3180999999999998e-27 111296000.0 2768.8 3752.8999999999996 3263.3 2756.3 3905.8 3805.1 3286.3 3667.2 4906.8 4553.200000000001 4095.3999999999996 True False 3236.105749339249 3943.9065800680573 3726.0850098743467 3431.593623735007 3331.2619939819733 4207.753156379042 3883.3781714437855 4187.036830328984 3795.417634549479 3524.6289576652657 3078.399152710087 1.0512300675792234 1.2811550368950744 1.2103969709691693 1.1147331627589565 1.0821410183436664 1.3668640574678956 1.261492736581944 1.360134479845767 1.2329192694872464 1.1449551480555527 1.0 11.587964591799414 -10.566774494335672 0.9565130502999852 1.0053382586373825 1.220599678175839 0.17764270661903125 0.10609582955562188 0.4262885072888974 0.721384030176011 0.05903518644085659 0.018111784625372017 2.711599253422912e-11 10.566774494335672 0.21526141953845657 VSGTLDT(ph)PEKTVDSQGPTPVCTPTFLER ddPTM_A549_PD325901_60min_R1 4 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VS(0.001)GT(0.014)LDT(0.979)PEKT(0.006)VDSQGPTPVCTPTFLER;VSGT(0.001)LDT(0.992)PEKT(0.006)VDSQGPTPVCTPTFLER;VSGT(0.001)LDT(0.999)PEKTVDSQGPTPVCTPTFLER;VSGTLDT(1)PEKTVDSQGPTPVCTPTFLER 179.08 4.4634e-58 221784000.0 7415.4 6453.000000000001 7477.5 6526.799999999999 6530.1 6805.5 6785.9 7371.1 6128.900000000001 6770.0 7548.3 True False 8168.2059490710435 6996.816956805473 7984.968115860283 6929.945612561713 6071.448303622025 6750.078264356331 7044.141137886963 7224.077627983914 5871.323646823873 6342.541044624569 6619.9069526161 1.233885311007744 1.0569358462116183 1.2062054909555382 1.0468342927120886 0.9171500969847723 1.0196636165239132 1.0640846145281864 1.0912657352576616 0.8869193613822024 0.9581012376794934 1.0 12.692595223757612 -5.177366116745278 0.40250819068533106 0.95589978234459 1.4048340751283845 0.4756709191980292 0.07431146239798624 3.599273231295783 0.3688700278767039 0.01996633050820107 0.7858135448071868 6.647125573084228e-06 5.177366116745278 0.4489342927837945 VSGVDGYET(ph)EGIR ddPTM_A549_MK2206_60min_R1 2 VSGVDGYETEGIR 13 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 VSGVDGYET(1)EGIR;VSGVDGYET(1)EGIR 164.53 6.3286e-19 39535000.0 6841.8 7088.5 5774.5 5073.700000000001 9482.1 6942.6 5519.4 7079.3 9524.6 9920.8 9923.2 True False 7996.528574049866 7449.2743725685295 6593.410930505751 6316.756727767048 8087.295650861913 7677.2613238751 6522.203535729186 8082.8124544469865 7367.29330766079 7679.684389705159 7458.995573612527 1.072065064945065 0.9986967144640242 0.8839542623984213 0.84686425476825 1.084233871846245 1.0292620833607578 0.8744077498587876 1.0836328262536203 0.9877058157433222 1.0295869348513031 1.0 12.864765655286005 -6.774093350298918 24.995479759044475 0.999627235394039 0.949099389297222 0.11924226095903845 0.07633037990078556 429.8984013283099 849182.32138352 0.010675984635608347 0.020272830564434866 1.6823124141866149e-07 6.774093350298918 -0.05052784609681693 VSGVDGYET(ph)EGIR ddPTM_A549_PD325901_60min_R1 2 VSGVDGYETEGIR 13 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 VSGVDGYET(1)EGIR;VSGVDGYET(1)EGIR 148.52 1.2362e-12 46763000.0 15765.1 17545.3 15571.9 16252.7 17698.9 15898.0 16531.0 17029.9 16795.3 17109.8 18881.6 True False 17365.56134634677 19023.904006235705 16628.70277544164 17256.59236644018 16455.790321890297 15768.531958965092 17160.09625111029 16690.2252848019 16089.451948229036 16029.48430802327 16559.282900324073 1.0486904204050356 1.1488362219998909 1.0041922029797685 1.0421098830374147 0.9937501775253957 0.9522472714477566 1.0362825705921397 1.007907491240171 0.9716273370699016 0.9680059459404227 1.0 14.015352577836767 -6.0890595732699255 1.5522741492809693 0.9904376399445687 1.0968082425186538 0.501701265654795 0.03630706174474288 0.22508986158557512 0.9866119634095065 0.004799494815175407 0.022322362393601664 8.145925366429905e-07 6.0890595732699255 0.10637060257408515 VSHDNLT(ph)VERDESSSKK ddPTM_A549_PD325901_60min_R1 1 VSHDNLTVERDESSSKK 17 2 O15344-2;O15344 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 1 VSHDNLT(0.788)VERDES(0.156)S(0.044)S(0.012)KK 129.51 3.1638e-12 24780000.0 2650.9 2547.3 2445.9 2601.1 2913.8 3002.4 2277.8 2632.9 2820.7 2442.0 2813.7 True False 2920.017416510564 2761.9699107501265 2611.8934823915315 2761.7640394732903 2709.144740064296 2977.9494498425465 2364.4829254599863 2580.384744029908 2702.155788248476 2287.811703245673 2467.6327375138653 1.1833273939510445 1.1192791653156642 1.058461189416302 1.119195736662078 1.0978719397254202 1.2068041587269684 0.9581988800497913 1.045692377476577 1.0950396901326944 0.9271281209985236 1.0 11.26891197607218 -7.761372327670634 24.999999999059487 1.0401836532604674 1.12498302770545 0.4818189604919092 0.059910766073580146 1.5056355445187997 561071.3839292793 0.008420701542822468 0.012054841802144655 1.7323182165792347e-08 7.761372327670634 0.08479937444498264 VSHDNLTVERDES(ph)SSKK ddPTM_A549_MK2206_60min_R1 4 VSHDNLTVERDESSSKK 17 2 O15344-2;O15344 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 1 VSHDNLT(0.004)VERDES(0.683)S(0.131)S(0.183)KK;VSHDNLT(0.001)VERDES(0.786)S(0.174)S(0.039)KK;VSHDNLT(0.003)VERDES(0.927)S(0.035)S(0.035)KK;VSHDNLT(0.007)VERDES(0.815)S(0.149)S(0.028)KK 109.85 1.6427e-09 41066900.0 7435.700000000001 7046.0 6370.799999999999 6170.0 7928.0 7165.7 6727.400000000001 6365.2 9170.599999999999 10325.8 10613.3 True False 8690.66437458894 7404.611304100705 7274.275237001647 7681.65027698183 6761.801702158094 7923.969617793301 7949.681499123917 7267.4865926074535 7093.473742438951 7993.194608420446 7977.724697821455 1.0893662922414673 0.9281607957871427 0.9118232970596359 0.962887360487574 0.8475852399374719 0.9932618532145094 0.9964848124296397 0.9109723471144658 0.8891600062829977 1.001939138186006 1.0 12.961761623186096 -5.258070653167618 24.086405462382494 0.9418972196784666 1.0893663867377643 0.416386824963504 0.04932740777160013 152.36445657982654 1089317.4393357001 0.007115268218861963 0.0708293786354795 5.519876319062523e-06 5.258070653167618 0.1474691670592977 VSHDNLTVERDES(ph)SSKK ddPTM_A549_PD325901_60min_R1 3 VSHDNLTVERDESSSKK 17 2 O15344-2;O15344 O15344-2 MID1 E3 ubiquitin-protein ligase Midline-1 1 VSHDNLT(0.001)VERDES(0.927)S(0.036)S(0.036)KK;VSHDNLTVERDES(0.934)S(0.053)S(0.013)KK;VSHDNLT(0.006)VERDES(0.686)S(0.127)S(0.181)KK 142.23 6.9598e-17 75937000.0 10991.8 11264.1 10868.7 11411.3 13172.9 12760.599999999999 11221.8 11568.4 13793.9 13443.099999999999 13882.5 True False 12107.679444264511 12213.365238362381 11606.315340802503 12116.150084057357 12247.680948037943 12656.681904363439 11648.851739804584 11337.659186765764 13214.190352579382 12594.300371786192 12175.040508418191 0.9944672821328927 1.0031478112879946 0.9532876159859629 0.9951630202527774 1.0059663406926265 1.039559736627753 0.9567813537663563 0.9312214755200662 1.0853508325859524 1.034436013833228 1.0 13.571638951955368 -8.768066806193165 24.999449242762157 1.0403045553247248 0.9864229927299302 0.3477212874697264 0.03349102712833474 153.739797001101 579923.6850694047 0.007078512831347501 0.0076208187173294134 1.7058199677464038e-09 8.768066806193165 -0.053881562594794596 VSHLLGINVTDFTR ddPTM_A549_MK2206_60min_R1 2 VSHLLGINVTDFTR 14 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 88.28200000000001 8.2778e-05 2652100.0 457.64 411.47 442.46000000000004 528.1600000000001 590.77 366.53999999999996 551.29 455.99 733.13 638.2 681.3399999999999 False True 534.8784437762258 432.41206546953146 505.2074812211574 657.5592237100032 503.868515588287 405.32701951043964 651.4522569866551 520.6279789108075 567.0772255680407 494.03017675085033 512.1444739726256 1.0443897590600877 0.8443165697276352 0.9864550081002358 1.2839330640618218 0.9838405785770892 0.7914310123594237 1.2720087594296206 1.0165646714341692 1.1072602642166773 0.9646304936549144 1.0 9.00040703609798 -6.00623146710728 24.94952817211617 1.0570388284419738 0.9371112995586371 0.08794226450362919 0.13806163616171052 439.4318022125292 1759424.6286975907 0.017605328104323796 0.05224561419369911 9.857539656365539e-07 6.00623146710728 -0.11992752888333669 VSHLLGINVTDFTR ddPTM_A549_PD325901_60min_R1 2 VSHLLGINVTDFTR 14 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 91.81200000000001 6.8469e-05 6193700.0 743.04 1048.48 818.7 796.5699999999999 954.71 1091.1399999999999 889.74 821.44 1235.72 1052.78 1138.22 False True 818.4728738028622 1136.8390892408802 874.2619052430376 845.7723197582709 887.6544631706993 1082.2541176063141 923.5995425844094 805.0557347927866 1183.7869857320543 986.3072911314416 998.2261557710602 0.8199272971069856 1.1388592481457782 0.8758154654520459 0.8472752540780407 0.8892318219061771 1.0841772792161994 0.9252407755945776 0.8064863158899468 1.1858905708773593 0.9880599555814963 1.0 9.963222895965188 -8.767272881300702 24.999994839794645 1.0877816529759112 0.9307213404456885 0.21430783294177735 0.11020005310864138 132.7904143754436 569083.6092833454 0.019654198406884687 0.021197872535964436 1.7089411945251313e-09 8.767272881300702 -0.15706031253022268 VSHS(ph)PPPK ddPTM_A549_MK2206_60min_R1 3 VSHSPPPK 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.006)HS(0.994)PPPK;VSHS(1)PPPK;VS(0.015)HS(0.985)PPPK 95.50200000000001 0.0010056000000000002 282626600.0 10821.4 11035.599999999999 9692.1 8172.200000000001 11817.4 9404.4 9145.4 10240.300000000001 14039.9 13903.400000000001 13635.7 True False 12647.787762171249 11597.264903141328 11066.585519015456 10174.389366864003 10079.07611441512 10399.56736586452 10807.000800024947 11691.893884603494 10859.88506711324 10762.612283669336 10249.579363825014 1.2339811531008287 1.131486911948099 1.0797111887414612 0.9926640894916734 0.9833648539752109 1.014633576336691 1.0543848109676874 1.1407193865798047 1.059544463399371 1.050054046281648 1.0 13.323277083214233 -5.5051632420185195 1.7015813136196718 1.0328383965893733 1.2535840772847828 0.6637312658920644 0.04206770865341492 0.28865487745329865 1.1451097121781075 0.006705489640152248 0.08843691116172067 3.1249045614739372e-06 5.5051632420185195 0.22074568069540956 VSHS(ph)PPPK ddPTM_A549_PD325901_60min_R1 4 VSHSPPPK 8 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.016)HS(0.984)PPPK;VS(0.008)HS(0.992)PPPK;VS(0.003)HS(0.997)PPPK;VS(0.087)HS(0.913)PPPK 102.07 0.0010056000000000002 450375000.0 21090.4 22206.399999999998 22482.799999999996 20292.0 25094.600000000002 20569.699999999997 20453.899999999998 19526.2 23009.399999999998 24824.9 25083.1 True False 23231.481882068132 24077.811261367588 24008.61800805934 21545.390753524298 23332.041867670225 20402.187183062306 21232.284357303546 19136.734622992444 22042.394935343877 23257.451577356067 21998.037714871545 1.0560706451722615 1.0945435939992971 1.091398165565857 0.9794233027866281 1.060641961346254 0.9274548688163045 0.9651899243244628 0.8699291669117948 1.0020164171480779 1.057251191165706 1.0 14.425087216695502 -6.262114024809668 24.96335883868031 0.9869183760193689 1.0820580845996934 0.4136931513921819 0.05174246553795158 42.07326614097094 1556852.3597161889 0.006799200780942767 0.01674614695708581 5.468723617057329e-07 6.262114024809668 0.0951397085803245 VSHS(ph)PPPKQR ddPTM_A549_PD325901_60min_R1 1 VSHSPPPKQR 10 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.006)HS(0.994)PPPKQR 51.013000000000005 0.0072563 16400000.0 1245.0 988.03 1109.3 1433.8 1350.2 2088.0 1652.5 1548.4 1794.3 1710.8 1527.0 True False 1371.3914834794414 1071.2947555915866 1184.5837687627968 1522.3625696039387 1255.3666099371303 2070.996020274194 1715.3867917826974 1517.5159473036997 1718.89181084633 1602.7797960330445 1339.1886804505361 1.0240465018103881 0.7999580426793755 0.8845533016036796 1.136779747191246 0.9374083191285593 1.5464557388414155 1.280914942624514 1.1331606736648714 1.2835322131516615 1.1968289602730438 1.0 10.387143523273126 -6.474038146257804 1.8284752381204663 1.1704553890126863 0.891746243266975 0.3863354298731466 0.15929069109229435 0.33952366488148283 2.216637182143182 0.025991727298639713 0.07497491497261881 3.3570812602314e-07 6.474038146257804 -0.27870914574571126 VSHYIINSSGPRPPVPPS(ph)PAQPPPGVSPSR ddPTM_A549_PD325901_60min_R1 1 VSHYIINSSGPRPPVPPSPAQPPPGVSPSR 30 1 P46108-2;P46108;I3L297 P46108-2 CRK Adapter molecule crk 1 VSHYIINSSGPRPPVPPS(0.489)PAQPPPGVS(0.121)PS(0.389)R 73.868 6.2811e-06 8472300.0 1856.9 1899.3 2099.2 1991.8 2548.9 1750.3 1724.7 2096.4 2205.7 2467.3 2097.6 True False 2045.41112102247 2059.3606765939303 2241.6643355150686 2114.8289622939915 2369.8740572276342 1736.0461371101155 1790.3344022920521 2054.5856574060167 2113.002099528367 2311.514256927949 1839.6084977819542 1.1118730553205507 1.1194559489570388 1.2185551100779757 1.1496081719800029 1.288249135663936 0.943704130092514 0.97321490113287 1.116860277544523 1.1486151004825473 1.2565251028764977 1.0 10.845183051810666 -7.260592065148916 24.999976225802374 1.0597184369797352 1.1750468569085661 0.2280397262215711 0.09383025662979906 75.79810723209489 2236407.6839466095 0.012508813041312418 0.020879081534197534 5.4879220600105646e-08 7.260592065148916 0.11532841992883092 VSIGNITLS(ph)PAIS(ph)RHSPVQMNR ddPTM_A549_MK2206_60min_R1 1 VSIGNITLSPAISRHSPVQMNR 22 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 VSIGNIT(0.119)LS(0.843)PAIS(0.563)RHS(0.475)PVQMNR 46.678000000000004 0.0049584 1071500.0 0.0 203.46 181.59 191.16 411.58 338.38 160.12 130.59 367.0 282.75 428.65 True False 0.0 213.81524495207637 207.3421925483659 237.99420858149853 351.03712721672895 374.1871470015348 189.21173137314884 149.10153241510204 283.87508597857254 218.8765786215964 322.20437486184 0.0 0.6636013090876235 0.6435114130193714 0.7386436285464762 1.089485912062033 1.1613347806403462 0.5872413478379432 0.46275452491616914 0.8810404455255988 0.6793097664035438 1.0 8.331832272734886 -5.466300401581708 1.341878256969052 0.8954012840625342 1.3737584076589937e-20 0.4855810742162828 0.2214719313868519 0.567468106422842 1.1525119805891992 0.032341758819642505 0.6191646819111186 3.4174297705460583e-06 5.466300401581708 -0.8954012840625342 VSIGNITLS(ph)PAIS(ph)RHSPVQMNR ddPTM_A549_PD325901_60min_R1 1 VSIGNITLSPAISRHSPVQMNR 22 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 VSIGNIT(0.113)LS(0.839)PAIS(0.565)RHS(0.483)PVQMNR 45.596000000000004 0.0087988 1516800.0 378.96 445.36 481.44 402.28 423.96 595.46 354.53 435.9 683.78 591.4 577.58 True False 417.43174022439274 482.89205019105583 514.1134135339054 427.12792195583256 394.18251218259934 590.6107711841341 368.02183315626 427.2056325430655 655.0431045090027 554.0589030710444 506.54132158128436 0.8240823057066387 0.9533122563103007 1.0149486164899302 0.8432242420469376 0.7781843166359432 1.1659676042625857 0.7265386207928621 0.8433776561593151 1.2931681515421805 1.0938079075985805 1.0 8.98453615279676 -8.746008245443022 24.99900515450795 1.1384405244376934 0.897702729527023 0.3893416488665552 0.13101857603875472 191.16697871462324 309697.2666562733 0.025028350534274976 0.028329027110325082 1.7946995526409404e-09 8.746008245443022 -0.24073779491067038 VSIGNITLS(ph)PAISR ddPTM_A549_MK2206_60min_R1 5 VSIGNITLSPAISR 14 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 VSIGNITLS(1)PAISR;VSIGNIT(0.085)LS(0.905)PAIS(0.01)R;VSIGNITLS(1)PAISR;VSIGNIT(0.021)LS(0.961)PAIS(0.018)R;VSIGNIT(0.005)LS(0.995)PAIS(0.001)R 276.63 4.509799999999998e-99 78220100.0 9418.300000000001 9043.0 8735.1 8226.400000000001 12269.3 9390.599999999999 8555.5 8945.800000000001 13804.5 12389.6 11818.5 True False 11007.878784672732 9503.25007422405 9973.86852871431 10241.868369297135 10464.502223043432 10384.307059024211 10109.923605814234 10213.894545363506 10677.80279125669 9590.780755049102 8883.640275993595 1.2391180239951296 1.0697472859076516 1.122723142636342 1.152890937848294 1.1779520441999238 1.1689247579155013 1.1380383819833908 1.1497420233195033 1.2019625355735633 1.0796003054025525 1.0 13.116935259880691 -10.862887441094989 1.0427939124755257 0.9975090151070405 1.157455753860451 0.46149237385781805 0.04669929728452365 0.25784284201089464 0.484929031061759 0.03100277519903379 0.007062196997207634 1.3712371124903606e-11 10.862887441094989 0.1599467387534106 VSIGNITLS(ph)PAISR ddPTM_A549_PD325901_60min_R1 2 VSIGNITLSPAISR 14 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 VSIGNITLS(1)PAISR;VSIGNITLS(1)PAISR 236.31 2.6875e-57 121185000.0 12565.3 11926.6 13650.0 13219.1 14033.1 12187.0 12433.3 13781.1 14188.599999999999 14451.8 14734.3 True False 13840.920005915039 12931.696438406345 14576.371084118084 14035.613784245665 13047.463467566835 12087.753112586965 12906.456035262821 13506.225149436194 13592.302484185595 13539.31088164038 12922.074508423277 1.0711066552737187 1.0007446118637373 1.12802097485326 1.0861734139589216 1.0097034697533915 0.935434407587384 0.998791333918538 1.0452056394375484 1.0518669022783786 1.047766043510642 1.0 13.657550078278124 -6.76698036697084 24.944602053824884 1.0169315395357104 1.0704930414642015 0.3169885406675015 0.04123216115193669 142.17856259425923 640067.3757842429 0.006325530781135303 0.012198229285915003 1.7100926210216633e-07 6.76698036697084 0.053561501928491184 VSIRLPS(ph)TSGSEGVPFR ddPTM_A549_MK2206_60min_R1 4 VSIRLPSTSGSEGVPFR 17 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VS(0.044)IRLPS(0.891)T(0.047)S(0.013)GS(0.005)EGVPFR;VS(0.001)IRLPS(0.965)T(0.028)S(0.005)GS(0.001)EGVPFR;VS(0.001)IRLPS(0.611)T(0.23)S(0.071)GS(0.088)EGVPFR;VS(0.023)IRLPS(0.431)T(0.16)S(0.181)GS(0.206)EGVPFR 70.99 0.00031349 13788500.0 4365.89 4658.22 4533.25 3790.2200000000003 5950.700000000001 3608.2000000000003 4117.43 4064.26 5539.5 6015.0 6072.67 True False 5102.745496237623 4895.303501133691 5176.13301596938 4718.824070149439 5075.359912844622 3990.0173290706844 4865.513734122811 4640.38130127424 4284.812094763765 4656.207322401073 4564.6584418342445 1.1178811210652502 1.072435881788908 1.1339584509831195 1.0337737489627472 1.111881639670976 0.8741108190051896 1.0659097052106425 1.0165889431607873 0.9386928177351147 1.0200560199045343 1.0 12.156291196852438 -7.230854437120678 24.987547787678245 0.9760166132643335 1.0916644918703426 0.505076385030182 0.052764761944201294 395.16874432700695 322848.51968407386 0.007349962568168517 0.01272959797822864 5.8768629487704563e-08 7.230854437120678 0.11564787860600911 VSIRLPS(ph)TSGSEGVPFR ddPTM_A549_PD325901_60min_R1 2 VSIRLPSTSGSEGVPFR 17 1 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 VS(0.001)IRLPS(0.951)T(0.042)S(0.003)GS(0.003)EGVPFR;VS(0.005)IRLPS(0.927)T(0.028)S(0.034)GS(0.006)EGVPFR 74.69800000000001 0.00014178 11002800.0 1859.54 1537.15 1419.88 1934.8400000000001 2007.33 1930.24 2198.88 1838.84 2544.3 3897.3999999999996 3981.1 True False 2048.319131879005 1666.6910251283934 1516.2415952320575 2054.350672459538 1866.3420657125623 1914.520765409033 2282.559581673304 1802.162893657926 2437.371919041586 3651.317498865553 3491.449938272187 0.5866671921673482 0.4773635751893921 0.43427275832068774 0.588394709584802 0.5345464201718323 0.5483454722986724 0.6537569267863751 0.5161646094085949 0.6980973412575314 1.0457883009694475 1.0 11.769610571626188 -9.921238651404241 0.39254924304808836 1.0639968520377916 0.5012201869248726 0.9046581268288358 0.05937909407953994 0.29069186783207773 0.0868977595772663 0.06589563027836724 0.021011420095070087 1.1988403411622825e-10 9.921238651404241 -0.562776665112919 down VSIS(ph)FENYR ddPTM_A549_PD325901_60min_R1 2 VSISFENYR 9 0 B4E1Q4;O14730-2;O14730 B4E1Q4 RIOK3 Serine/threonine-protein kinase RIO3 1 VS(0.004)IS(0.99)FENY(0.006)R;VS(0.002)IS(0.998)FENYR 77.062 0.0019428000000000002 5930200.0 2342.54 3091.7 2789.4 2786.3 3928.7 3139.9 2623.6000000000004 3321.3 3216.6000000000004 3328.6 3573.2 True False 2580.3529363131966 3352.2484093220933 2978.705458024833 2958.4034228535747 3652.76166527922 3114.3296954305256 2723.4425336890067 3255.0540659905537 3081.4174880278133 3118.4316279375707 3133.7190523810455 0.8234155306145287 1.0697348273052767 0.9505336656652642 0.9440550902627141 1.1656315081927329 0.9938126690279437 0.8690768024082106 1.038719174112726 0.9833100659379491 0.9951216352876755 1.0 11.613660128191391 -5.2450517694591765 24.095164316156573 0.9961890818285006 0.8234153095254697 0.3325533466685515 0.07203257282522384 1646.0769130891267 2420209.7186261653 0.009093624531106532 0.3178218692315691 5.687851255765587e-06 5.2450517694591765 -0.17277377230303093 VSISEGDDKIEYR ddPTM_A549_PD325901_60min_R1 2 VSISEGDDKIEYR 13 1 M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087;M0R2U2;M0R1H0;M0R2B0 M0R0P1 FBL rRNA 2-O-methyltransferase fibrillarin 0 ; 82.102 0.00056275 4464200.0 2239.5 2297.0 2270.6 2332.6 2313.3 2866.7 3042.4 3053.9 2576.4 2912.6 2745.6 False True 2466.852391367236 2490.5762513222026 2424.6965702269968 2476.679404281036 2150.8217884517585 2843.354545651354 3158.1801968651594 2992.987568761796 2468.1228676723426 2728.6979389325743 2407.9086057923987 1.0244792453638165 1.034331720618856 1.0069720106461737 1.0285603856903889 0.8932323192324662 1.180839895173537 1.3115864070870165 1.2429822135117368 1.0250068718285628 1.1332232180110546 1.0 11.233564919088458 -7.258567437375019 24.998774606704174 1.0668941208529723 1.0018106270494718 0.14638915403041397 0.10812317036533418 669.8323506007983 5830526.781921581 0.019074801913939635 0.03206630755455519 5.513565809220317e-08 7.258567437375019 -0.06508349380350054 VSKS(ph)PSPASTSTVPNMTDAPTAPK ddPTM_A549_PD325901_60min_R1 1 VSKSPSPASTSTVPNMTDAPTAPK 24 1 Q659A1 Q659A1 ICE2 Little elongation complex subunit 2 1 VS(0.16)KS(0.679)PS(0.16)PASTSTVPNMTDAPTAPK 129.51 3.7693e-23 23247000.0 1674.5 1394.8 1352.3 1116.6 1676.3 1703.0 1513.3 1540.8 1209.2 1507.9 1600.6 True False 1844.4940072982536 1512.3446910510258 1444.0752100405034 1185.5698460174071 1558.5624709210574 1689.131332627851 1570.889459609535 1510.0675352657834 1158.3815291062715 1412.690936660176 1403.7363470393766 1.3139889204895776 1.0773708996284916 1.0287367802979566 0.8445815686954997 1.1102957291148192 1.203310960915418 1.119077284650142 1.0757486891684966 0.8252130334513433 1.0063791107494549 1.0 10.45505627547719 -8.673897429786123 7.911363595177388 0.917602710148598 1.090832616800135 0.24314084606297903 0.11740217797675759 0.23333553372484522 18.511507757678892 0.021240980116168203 0.02407142858122811 2.118861501760409e-09 8.673897429786123 0.17322990665153704 VSKSPS(ph)PASTSTVPNMTDAPTAPK ddPTM_A549_MK2206_60min_R1 1 VSKSPSPASTSTVPNMTDAPTAPK 24 1 Q659A1 Q659A1 ICE2 Little elongation complex subunit 2 1 VS(0.1)KS(0.087)PS(0.542)PAS(0.072)T(0.091)S(0.091)T(0.015)VPNMTDAPTAPK 101.93 3.3691000000000004e-11 10862000.0 1009.8 934.91 827.93 927.58 1246.7 731.81 674.28 1055.2 1232.8 1449.5 1309.2 True False 1180.2295527603187 982.4929256765239 945.3429234901068 1154.8371416406487 1063.3120814935032 809.2496484638369 796.7879479783088 1204.77783141447 953.5727683770681 1122.0569432785296 984.0895079181636 1.1993111838546968 0.9983776046499904 0.9606269713107449 1.1735082351235517 1.0805034226438757 0.8223333771496055 0.8096701992727366 1.2242563524157182 0.9689898740962563 1.1401980554108695 1.0 9.942645731718146 -5.2617745453053475 7.476648137000545 0.9955609694095734 1.2015566912417084 0.12268399889396964 0.1274261075213703 0.12451379540912384 66.19982850214525 0.015677967504817467 0.12938346303356482 5.473000082570478e-06 5.2617745453053475 0.205995721832135 VSLEPHQGPGT(ph)PESK ddPTM_A549_MK2206_60min_R1 2 VSLEPHQGPGTPESK 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VSLEPHQGPGT(1)PESK;VSLEPHQGPGT(1)PESK 121.44 4.4417000000000004e-07 71489000.0 7417.6 8130.299999999999 7675.799999999999 7309.2 9271.900000000001 7274.299999999999 7016.9 6384.2 11085.5 10142.900000000001 11833.5 True False 8669.509537091453 8544.097542680947 8764.343860139581 9099.95432812245 7908.015792411658 8044.061597710459 8291.779901775217 7289.179900792518 8574.651949905894 7851.611845450013 8894.915362014655 0.9746590253252113 0.9605597349659042 0.9853206583130993 1.0230512554378433 0.8890490207678077 0.9043438043336837 0.9321932322352271 0.8194771511734266 0.9639947768950752 0.8827078758927798 1.0 13.118765162511727 -9.271916093727897 2.7909962315800194 0.9873426002256503 0.9370683750022615 0.0 0.06067621170737989 0.35174114728390954 5.594914021610759 0.010833865805519557 0.009975371622968935 5.346676479203193e-10 9.271916093727897 -0.05027422522338887 VSLEPHQGPGT(ph)PESK ddPTM_A549_PD325901_60min_R1 2 VSLEPHQGPGTPESK 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VSLEPHQGPGT(0.999)PES(0.001)K;VSLEPHQGPGT(0.997)PES(0.003)K 97.384 1.3132e-05 107027000.0 8447.1 6886.299999999999 8045.8 7538.8 9033.7 9018.6 8507.9 8940.6 9201.7 8485.2 9763.8 True False 9304.643373573646 7466.6326684719525 8591.836371325806 8004.454554142961 8399.204076573145 8945.155511707297 8831.67279020152 8762.272719234981 8814.984548773715 7949.443023906712 8562.914497827727 1.086621076963233 0.8719732832046981 1.0033775735475832 0.9347815578648556 0.980881460243926 1.0446391253791611 1.0313863104019048 1.0232815849624364 1.0294374130455155 0.9283571645989642 1.0 13.063886204642992 -7.0751758432746366 6.67045243266792 1.018283506902741 0.9676291280867141 0.067686087099881 0.056494126090496685 0.2861740600513097 21.287131452079137 0.006482726544743491 0.011322993759648806 8.410545346736802e-08 7.0751758432746366 -0.05065437881602686 VSLEPHQGPGT(ph)PESKK ddPTM_A549_MK2206_60min_R1 1 VSLEPHQGPGTPESKK 16 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 VSLEPHQGPGT(0.826)PES(0.174)KK 64.83 0.0011331 3397900.0 1088.2 1548.7 1667.7 1759.6 2093.4 1551.3 1854.5 1293.9 2528.9 2484.0 2265.7 True False 1271.8615560643486 1627.5222149674667 1904.2049370169611 2190.702078991444 1785.4636331102115 1715.4575363303995 2191.438644963182 1477.3142874025611 1956.108187823465 1922.862674787077 1703.0641598611232 0.7468077750917281 0.9556435120448917 1.118105225802086 1.2863297406071215 1.0483830704627168 1.0072771048568638 1.286762235159645 0.8674448809509496 1.1485816177254158 1.1290606191512345 1.0 10.733917071627967 -5.400383397481315 2.7693904358144974 1.083167222892871 0.7298881874015745 0.43948566444182546 0.11747261491063272 0.23851913664930763 2.863016443982188 0.015688718937511746 0.16175831772386162 3.977558745091696e-06 5.400383397481315 -0.3532790354912966 VSLKPLHS(ph)VNNPILR ddPTM_A549_MK2206_60min_R1 1 VSLKPLHSVNNPILR 15 1 R4GN33;Q8IW41-2;Q8IW41 R4GN33 MAPKAPK5 MAP kinase-activated protein kinase 5 1 VS(0.001)LKPLHS(0.999)VNNPILR 63.46 0.0018849000000000001 2473300.0 335.51 607.59 440.33 576.66 810.48 476.22 452.56 462.96 879.17 744.62 590.94 True False 392.1358855680479 638.5137357732825 502.7754151925872 717.9417258872512 691.2594656363636 526.6132843107482 534.7842939684751 528.5859977555372 680.0393987459985 576.4098248389502 444.19328888570084 0.8828046154226156 1.4374682187906354 1.1318843120161608 1.6162822443541935 1.5562132137800881 1.1855498439244894 1.2039450107632874 1.1899909588493403 1.5309537891757414 1.297655410969685 1.0 8.795043785801314 VSLKPLHS(ph)VNNPILR ddPTM_A549_PD325901_60min_R1 2 VSLKPLHSVNNPILR 15 1 R4GN33;Q8IW41-2;Q8IW41 R4GN33 MAPKAPK5 MAP kinase-activated protein kinase 5 1 VSLKPLHS(1)VNNPILR;VS(0.005)LKPLHS(0.995)VNNPILR 91.62200000000001 1.2267e-05 9278500.0 1963.94 2302.0 1934.44 2477.6000000000004 2614.6000000000004 2498.5 2275.0 2340.2 2983.6000000000004 2587.4 2601.8 True False 2163.317743023786 2495.997618869702 2065.722731132702 2630.635724962142 2430.959515880331 2478.153044375034 2361.5763699277686 2293.522875148616 2858.209667748488 2424.031122431554 2281.7950941690938 0.9480771295161142 1.0938745662342697 0.9053059744108733 1.1528799109457621 1.0653715235396957 1.0860541556547798 1.03496425948261 1.005139716975241 1.2526145204941346 1.06233514509078 1.0 11.15595352769143 -6.160367151111574 0.6713987141488192 1.1071352063194315 0.9675633247761974 0.08724799104834757 0.08690668892361215 2.1082507376076896 1.2163395015815828 0.018859593527564045 0.1783221131980699 6.912463464701027e-07 6.160367151111574 -0.13957188154323408 VSLLGPVT(ph)TPEHQLLK ddPTM_A549_PD325901_60min_R1 1 VSLLGPVTTPEHQLLK 16 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VSLLGPVT(0.553)T(0.447)PEHQLLK 76.58800000000001 0.00048049999999999997 1548100.0 1780.1 2014.2 2348.7 1668.8 2649.8 2530.3 2605.7 2593.1 2509.2 1823.4 2397.5 True False 1960.8144415596403 2183.943702835514 2508.0969058804494 1771.8779858802168 2463.6871893137372 2509.6940757182924 2704.861339393752 2541.3785862524037 2403.7470499780475 1708.2702128166088 2102.6226990046885 0.9325564888497706 1.0386759849350624 1.1928421143116636 0.8426989714887815 1.1717210084719263 1.193601722699131 1.2864225905456759 1.2086707650666035 1.1432136878936487 0.8124473371400618 1.0 11.037974276381767 -5.394184878694604 3.6113528898100355 1.099882073400655 0.9322716329940175 0.09526064320803906 0.1447258537262424 0.38570953482340403 8.056474100841024 0.017040424717246313 0.13440595102926012 4.03473598126284e-06 5.394184878694604 -0.16761044040663742 VSLLGPVTT(ph)PEHQLLK ddPTM_A549_MK2206_60min_R1 2 VSLLGPVTTPEHQLLK 16 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VSLLGPVT(0.028)T(0.972)PEHQLLK;VSLLGPVT(0.156)T(0.844)PEHQLLK 154.49 3.3227e-20 49941000.0 6485.4 7287.1 6685.6 5699.5 8249.3 7062.299999999999 5977.0 7148.8 10685.900000000001 10075.0 9280.7 True False 7579.976967193277 7657.982264279346 7633.718610613772 7095.87775586028 7035.8388977816285 7809.627898424664 7062.943532458843 8162.164292281811 8265.560711875825 7799.050502608615 6976.046055710438 1.086572093512553 1.0977539716800881 1.0942758332802258 1.0171775959035922 1.0085711650401512 1.1194920211330706 1.0124565514697645 1.1700272944156442 1.184848931023014 1.117975776009174 1.0 12.768193849450912 -8.230450795026709 24.995899387909446 1.0959340910979456 1.0633141751361654 0.13986022466349068 0.05771271109055628 2096.6023757976172 1691157.5676878553 0.012521442255918022 0.016164057781535315 5.882327563378534e-09 8.230450795026709 -0.032619915961780155 VSLLGPVTT(ph)PEHQLLK ddPTM_A549_PD325901_60min_R1 2 VSLLGPVTTPEHQLLK 16 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VSLLGPVT(0.167)T(0.833)PEHQLLK;VSLLGPVT(0.025)T(0.975)PEHQLLK 167.99 6.3837999999999995e-28 84547000.0 13002.0 11431.7 12189.599999999999 11935.0 15199.1 13047.1 12655.0 13207.400000000001 13583.9 15520.3 14508.699999999999 True False 14321.953468433492 12395.089478554646 13016.859558019472 12672.197843648353 14131.567650048475 12940.848743352226 13136.592950081713 12943.968045995147 13013.015922284716 14540.345609289032 12724.221878227045 1.125566152924478 0.974133396696297 1.022998473509266 0.9959114172106892 1.1106036805464388 1.0170247632584795 1.0324083528094 1.0172699100873208 1.0226964011490431 1.1427296496746597 1.0 13.635289813709187 -14.999999426137446 0.07212138779839253 0.8782160277885812 1.074637351735523 0.0 0.05996215336279133 324.92244937804287 1.7491466014585009 6.4735725411283305 0.8234915417851955 1.0000013213682351e-15 14.999999426137446 0.19642132394694178 VSLNTYT(ph)PAK ddPTM_A549_MK2206_60min_R1 2 VSLNTYTPAK 10 0 A0A087WZV0;O43314;O43314-2;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 VSLNT(0.109)YT(0.891)PAK;VSLNT(0.131)YT(0.869)PAK 99.539 0.00049961 6205600.0 6974.1 7612.6 6591.1 6522.1 8500.9 7269.5 6811.1 6600.7 9604.6 10350.2 10719.2 True False 8151.157579625414 8000.04882395644 7525.8170896279225 8120.014792788199 7250.428871074137 8038.753664896444 8048.588705693565 7536.369438795961 7429.173435394539 8012.082631473913 8057.326805130142 1.0116453976318212 0.9928911930024692 0.934033988150536 1.0077802463737904 0.8998553796350609 0.9976948756476066 0.9989155088718739 0.9353436469769993 0.9220394822094526 0.9943847165753011 1.0 12.976085557079353 -5.562022135221435 8.28669642662855 0.9626161513960263 1.0070699934580567 0.13872647940968885 0.035881639066772476 0.2921034303953769 55.356639157518664 0.00517106930363967 0.020370907010492358 2.7414344423033584e-06 5.562022135221435 0.0444538420620304 VSMPDVELNLKS(ph)PK ddPTM_A549_MK2206_60min_R1 6 VSMPDVELNLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK 177.6 1.3400000000000002e-23 309516000.0 47851.2 45396.1 43985.8 37468.4 50498.899999999994 37286.7 36183.6 35734.5 49544.1 45564.299999999996 47549.3 True False 55927.31271048184 47706.56758757962 50223.64784951768 46648.1596820204 43070.57870548833 41232.353845091704 42757.69175189527 40799.97480731653 38322.44045567028 35271.2929842193 35741.496516080915 1.564772551852127 1.3347669302575327 1.4051915209236108 1.3051540710118932 1.2050580670596682 1.1536269564577502 1.1963039021787352 1.1415295604357163 1.0722114122565667 0.9868443244493117 1.0 15.125312421626903 -2.0000000000000004 0.18221237389120198 0.9665510402704213 3.4293181839647606 0.9380020392138642 0.04175025954605689 7.62666672048125 0.08064517343317386 0.03999348868010871 5.277770242075076 0.00999999999999999 2.0000000000000004 2.4627671436943395 VSMPDVELNLKS(ph)PK ddPTM_A549_PD325901_60min_R1 8 VSMPDVELNLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK 177.0 1.5815999999999998e-23 393901000.0 67804.40000000001 68992.7 76483.20000000001 75369.1 87455.5 84181.1 81362.9 81023.3 85913.2 89628.9 95449.0 True False 74687.85277303873 74806.95695890165 81673.8098828439 80024.47813135466 81312.92738509602 83495.55703175467 84459.20968298706 79407.22671995091 82302.56697520075 83969.71595783613 83709.37810106312 0.8922280211288558 0.8936508507874291 0.9756829131407276 0.9559798429602517 0.9713717773285349 0.997445673660957 1.0089575576707626 0.9486061003115065 0.9831941037219998 1.0031100201993939 1.0 16.35310163890797 -5.598431987709599 0.8648407972309923 0.9895566102996676 0.8511190709794616 0.749974947097851 0.01957811203748014 0.502664761140804 0.375862581697622 0.0029404326256173177 0.058651642172826556 2.5209719432345503e-06 5.598431987709599 -0.13843753932020597 VSNAESS(ph)TPKEEPSSIEDRDPQILLEPEGVK ddPTM_A549_MK2206_60min_R1 2 VSNAESSTPKEEPSSIEDRDPQILLEPEGVK 31 2 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 VS(0.004)NAES(0.08)S(0.458)T(0.458)PKEEPSSIEDRDPQILLEPEGVK;VS(0.001)NAES(0.11)S(0.507)T(0.382)PKEEPSSIEDRDPQILLEPEGVK 132.6 1.6669999999999998e-28 43828000.0 3584.3 4384.8 3237.7 3602.8 4762.200000000001 4497.9 3762.4 3916.5 5377.1 5568.8 5857.700000000001 True False 4189.242212278485 4607.967591004937 3696.8545449300286 4485.486161735838 4061.686688448194 4973.864792535623 4445.979378705568 4471.675868778218 4159.1954354642585 4310.804212300428 4403.071425704419 0.9514363514119635 1.046534826599534 0.8396081252164999 1.0187175560110824 0.9224666819476796 1.1296352731184427 1.009745004986896 1.015581042513482 0.9446123020361532 0.9790448065717603 1.0 12.104294532224143 VSNAESST(ph)PKEEPSSIEDRDPQILLEPEGVK ddPTM_A549_PD325901_60min_R1 1 VSNAESSTPKEEPSSIEDRDPQILLEPEGVK 31 2 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 VS(0.198)NAES(0.155)S(0.132)T(0.514)PKEEPSSIEDRDPQILLEPEGVK 73.665 6.2224e-06 17476000.0 2060.2 1857.8 1932.0 2002.0 2460.4 1832.5 2191.9 2607.5 3118.5 4711.1 4621.4 True False 2269.349987360919 2014.3633259496667 2063.1171380597902 2125.65899312811 2287.5899919192098 1817.5767275634391 2275.3139539537015 2555.491366955821 2987.440289875873 4413.640341998643 4052.9970974683097 0.5599189766946688 0.49700586442756933 0.5090349409202659 0.5244659549487206 0.5644193511384809 0.4484525115250593 0.561390472096555 0.630518923527505 0.7370941103663674 1.0889818659765653 1.0 11.984773426869053 -9.375401978083646 0.5345575459891764 0.9897630918502971 0.5029311944842089 0.929302054100102 0.053542152131460165 0.11705793024491593 0.07645834860075257 0.022195844367916735 0.01321675879063185 4.213063664730384e-10 9.375401978083646 -0.48683189736608823 down VSNGS(ph)PSLER ddPTM_A549_MK2206_60min_R1 2 VSNGSPSLER 10 0 E7ES52;P46527 E7ES52 CDKN1B Cyclin-dependent kinase inhibitor 1B 1 VS(0.002)NGS(0.943)PS(0.055)LER;VSNGS(0.996)PS(0.003)LER 149.02 3.1081e-08 52230000.0 6303.8 7065.2 7378.700000000001 6367.5 8358.2 6398.8 6961.799999999999 6454.0 9789.2 9310.6 10361.2 True False 7367.727326887008 7424.788502090878 8425.110612680368 7927.537785847932 7128.71985204059 7075.916768820322 8226.668945001175 7368.874264546051 7571.961830140163 7207.328993507465 7788.228085427493 0.9460081607872679 0.9533347535087416 1.0817750225426168 1.0178872137400676 0.9153198614430791 0.9085400030926197 1.0562953286375942 0.9461554263329688 0.9722316484680278 0.9254131895537389 1.0 12.92707941999106 -12.9115843676989 14.435352745996653 0.9838516226445629 0.9831678808116463 0.0 0.055455474203105995 0.0 0.0 0.0 0.006623557132390094 1.2257887531584393e-13 12.9115843676989 -0.00068374183291664 VSNGS(ph)PSLER ddPTM_A549_PD325901_60min_R1 2 VSNGSPSLER 10 0 E7ES52;P46527 E7ES52 CDKN1B Cyclin-dependent kinase inhibitor 1B 1 VS(0.077)NGS(0.658)PS(0.265)LER;VS(0.031)NGS(0.935)PS(0.034)LER 121.21 1.8069e-06 28767000.0 4634.6 5295.8 4917.6 5367.4 5737.3 5978.4 4741.0 5499.4 5470.8 5682.3 6128.5 True False 5105.101180187804 5742.095651611716 5251.337907931066 5698.932107750162 5334.331840610501 5929.713892532204 4921.421349374746 5389.710152804159 5240.881301219472 5323.518608252619 5374.73335176235 0.9498333863416434 1.0683498651572936 0.9770415691802045 1.060319039991353 0.9924830668783593 1.1032573161211576 0.9156586991912882 1.0027865198255645 0.9750960574632064 0.9904712029122452 1.0 12.391977466967436 -7.769691758382486 24.999994525488265 0.9843148098737968 1.0250930151384658 0.20507829761624585 0.04639929389289865 238.64924802885525 722971.5350440919 0.006430862742413417 0.008964445579473944 1.6994494130758142e-08 7.769691758382486 0.04077820526466902 VSNLQVS(ph)PK ddPTM_A549_MK2206_60min_R1 2 VSNLQVSPK 9 0 A0A0C4DGF9;O00443-2;O00443 A0A0C4DGF9 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 VSNLQVS(1)PK;VSNLQVS(1)PK 141.44 3.9451e-05 92152000.0 29529.0 30740.0 29522.0 24962.9 33699.0 24652.0 24088.2 24834.0 34351.0 34119.0 33702.0 True False 34512.7732852639 32304.534698844116 33708.663518987065 31078.811620627162 28741.92174079535 27260.65827732679 28464.714137288815 28354.29555093533 26570.55334727505 26411.494203325372 25332.863272118822 1.3623715927622135 1.275202662716704 1.3306298288076497 1.2268179592171207 1.1345705944115885 1.07609858327107 1.1236279859693905 1.1192692766846406 1.0488570937229358 1.0425783268010482 1.0 14.628722527860512 -5.806913808564103 0.3017271789057018 1.000574649333391 1.56732387758908 0.9056849763580832 0.03588363475808419 1.0464966584068314 0.08656186283599153 0.015062162748970945 0.20813768386865888 1.5598620471909091e-06 5.806913808564103 0.5667492282556892 VSNLQVS(ph)PK ddPTM_A549_PD325901_60min_R1 2 VSNLQVSPK 9 0 A0A0C4DGF9;O00443-2;O00443 A0A0C4DGF9 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 VSNLQVS(1)PK;VSNLQVS(1)PK 139.76 4.1775e-05 110450000.0 19916.5 17615.9 18014.4 18393.7 22715.0 21132.5 21005.5 22580.0 23619.0 26369.0 28937.0 True False 21938.408418247618 19100.453716006425 19236.9655133873 19529.837073876395 21119.57676249586 20960.403926458046 21804.87579715064 22129.624186332672 22626.37556728499 24704.05683983832 25377.93244675649 0.8644679177184715 0.752640261616254 0.7580194152438112 0.7695598179580019 0.8322024186487704 0.8259303223551987 0.8592061564864588 0.8720026437441724 0.8915767907711027 0.9734463944873374 1.0 14.631286916407152 -9.153451585010087 0.31986347520657443 1.0196343261886183 0.7692751919662854 0.8264300618579457 0.03210759433006476 0.36073732188915797 0.10393334409380747 0.03339091868729779 0.021499424961306083 7.023416361602555e-10 9.153451585010087 -0.2503591342223329 VSNQDS(ph)KSPLGFYCDQNPVESSMCQSNSR ddPTM_A549_MK2206_60min_R1 1 VSNQDSKSPLGFYCDQNPVESSMCQSNSR 29 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.011)NQDS(0.529)KS(0.46)PLGFYCDQNPVESSMCQSNSR 76.976 2.5337e-06 5075800.0 581.48 781.45 670.05 950.81 758.7 927.73 757.06 669.46 877.81 1089.4 916.44 True False 679.6196081789174 821.2224671571805 765.073165466339 1183.7584926834832 647.096235043813 1025.9017728226665 894.6080024566331 764.3580051352648 678.9874365745248 843.3037833788405 688.8626555427146 0.9865821622214153 1.1921425273230806 1.110632372520735 1.7184245410296906 0.93936901621413 1.489268963222311 1.2986739740621065 1.1095941970218604 0.9856644588166713 1.2241972715365892 1.0 9.428072558888388 -8.506009515853025 3.3794766947265815 0.9937185034852001 1.2551245831961289 0.09462370985273105 0.21782560700150666 0.2400694130316159 5.728965887043612 0.03266900398421615 0.03852884672836653 3.1188212466616783e-09 8.506009515853025 0.2614060797109288 VSNQDSKS(ph)PLGFYCDQNPVESSMCQSNSR ddPTM_A549_MK2206_60min_R1 3 VSNQDSKSPLGFYCDQNPVESSMCQSNSR 29 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.004)NQDS(0.139)KS(0.494)PLGFY(0.052)CDQNPVES(0.13)S(0.161)MCQS(0.011)NS(0.011)R;VS(0.013)NQDS(0.18)KS(0.807)PLGFYCDQNPVESSMCQSNSR;VS(0.001)NQDS(0.119)KS(0.88)PLGFYCDQNPVESSMCQSNSR 122.89 2.2164e-21 22068200.0 2095.03 2846.9799999999996 2162.23 2193.4 3270.88 2516.13 2017.4099999999999 2377.12 3407.8 3079.16 3491.5 True False 2448.6198454341984 2991.8791215652304 2468.8667272088414 2730.783098465467 2789.7378849085367 2782.3852065280794 2383.947283221985 2714.084039624683 2635.9387411383627 2383.575617430504 2624.464189502192 0.9329980021173969 1.1399961689447664 0.9407126746420327 1.040510710486563 1.062974261972191 1.0601726697805856 0.9083558056374821 1.0341478654884944 1.0043721502019607 0.9082141897629094 1.0 11.357807196944986 VSNQDSKS(ph)PLGFYCDQNPVESSMCQSNSR ddPTM_A549_PD325901_60min_R1 2 VSNQDSKSPLGFYCDQNPVESSMCQSNSR 29 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.004)NQDS(0.202)KS(0.793)PLGFYCDQNPVESSMCQSNSR;VS(0.013)NQDS(0.176)KS(0.748)PLGFY(0.059)CDQNPVES(0.001)S(0.003)MCQSNSR 82.789 8.428299999999999e-07 22702000.0 2444.45 2494.1 2505.9 2352.4 2844.9 2486.2 1551.06 2603.0 1905.3899999999999 2608.9 2637.8 True False 2692.608764491019 2704.286560044711 2675.9654432008415 2497.7024053119735 2645.0840383721984 2465.9532114969825 1610.0864370726001 2551.0811229860037 1825.3130844722104 2444.173608762341 2313.3673223918945 1.1639348141682098 1.1689827784238898 1.1567404005837 1.0796825826732466 1.1433912862732611 1.0659583489522635 0.6959925566026667 1.1027566172882248 0.7890286453017488 1.0565436734168094 1.0 11.175778643640433 -7.537325735467881 24.98206338735113 0.9013797767634136 1.1376475661822791 0.4521599617744032 0.11061459832732054 138.17020220318506 238926.31336661638 0.01631241705049646 0.02420059120878253 2.9018453564292087e-08 7.537325735467881 0.2362677894188655 VSNS(ph)PEPQK ddPTM_A549_MK2206_60min_R1 4 VSNSPEPQK 9 0 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.001)NS(0.999)PEPQK;VS(0.005)NS(0.995)PEPQK;VS(0.063)NS(0.937)PEPQK;VSNS(1)PEPQK 142.04 3.8328e-05 102766400.0 45377.5 46855.799999999996 44817.299999999996 43304.4 43893.2 37471.9 39773.1 42357.4 47795.799999999996 62296.0 59695.6 True False 53036.112626640315 49240.56008269681 51173.06705268948 53913.979944008395 37436.56842497042 41437.15158616588 46999.35743865466 48361.69116409711 36970.12761420888 48223.290333549005 44871.53500525475 1.1819544978889052 1.0973674084679834 1.140434956073974 1.2015185114058327 0.8343054994794886 0.9234618691184359 1.0474203174273118 1.0777810734229092 0.8239104726388219 1.0746966941938076 1.0 15.453512917399005 -6.753701172001684 24.99982958075075 0.9332299608211416 1.150116346220007 0.4784350879378949 0.08881535983204095 102.19073432220489 330144.828129589 0.013254597786744858 0.027188601941602376 1.763188838616756e-07 6.753701172001684 0.2168863853988654 VSNS(ph)PEPQK ddPTM_A549_PD325901_60min_R1 2 VSNSPEPQK 9 0 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.004)NS(0.996)PEPQK;VS(0.004)NS(0.996)PEPQK 120.55 0.00013805 207430000.0 14186.8 13870.8 14789.2 13267.4 16868.1 15061.8 14144.9 14956.1 14930.4 14404.6 17230.8 True False 15627.03349222983 15039.740995576825 15792.884046684187 14086.8971655484 15683.342847785885 14939.14169452387 14683.191909886278 14657.788852666532 14302.927209864602 13495.09109769558 15111.52083504067 1.0341138832296606 0.9952499923569968 1.04508898998859 0.9321958603189451 1.0378401366075127 0.9885928661715447 0.9716554720183305 0.969974432929211 0.9464915785775116 0.8930332853330748 1.0 13.883361241293718 -7.515391023685585 9.997923402070377 0.9737292227602453 1.0066236948645442 0.24315871542375012 0.03912792611838679 0.24471594622415577 279.6343239304241 0.004805820846442439 0.007374077326226834 3.052171806098216e-08 7.515391023685585 0.032894472104298855 VSNS(ph)PEPQKAVEQEDELSDVSQGGSK ddPTM_A549_MK2206_60min_R1 1 VSNSPEPQKAVEQEDELSDVSQGGSK 26 1 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.15)NS(0.85)PEPQKAVEQEDELSDVSQGGSK 139.91 1.6297e-25 4206400.0 1092.2 1557.7 1095.1 970.88 1631.9 1228.7 983.18 953.27 2097.3 1696.4 1664.3 True False 1276.5366582737383 1636.9802765253569 1250.4016468952893 1208.74564358446 1391.849671764858 1358.720218454949 1161.8110795119433 1088.3989417669377 1622.2648986998918 1313.1820617990327 1251.008377656737 1.0204061627987004 1.3085286283946265 0.9995150066360194 0.9662170655072356 1.1125822149743958 1.0861000155730107 0.9286996796041693 0.8700173086015756 1.2967658152206425 1.0496988551417643 1.0 10.288875735527418 -8.767172083999517 24.999418938568944 1.1401393899608718 1.0425946987896004 0.05975551163266146 0.12820403955325804 277.3709821374084 1209569.44945135 0.025874094652098868 0.0279112226578599 1.7093378761752948e-09 8.767172083999517 -0.0975446911712714 VSNS(ph)PEPQKAVEQEDELSDVSQGGSK ddPTM_A549_PD325901_60min_R1 2 VSNSPEPQKAVEQEDELSDVSQGGSK 26 1 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.047)NS(0.953)PEPQKAVEQEDELSDVSQGGSK;VS(0.009)NS(0.991)PEPQKAVEQEDELSDVSQGGSK 190.14 4.393e-58 40055000.0 5337.9 5865.8 6088.1 6242.2 7067.7 8114.0 7012.7 7232.2 7382.0 6433.2 7787.7 True False 5879.79967844571 6360.131552026892 6501.275076719364 6627.766516935215 6571.289134241344 8047.92227418813 7279.572135996682 7087.948097448857 7071.760211596506 6027.006654103222 6829.862270297735 0.8608957905368406 0.9312239837816866 0.9518896310680585 0.9704099811439227 0.9621407978926756 1.1783432748252618 1.0658446463341849 1.037787852366146 1.0354176895119476 0.882449223070568 1.0 12.73764077035726 -6.117347917375896 1.0921882852556133 1.0312846620829177 0.8794419598970321 0.3479634328661535 0.06884438089985374 0.4349094497260671 0.8368449006243446 0.008472291411462662 0.053189362692068975 7.63224112619798e-07 6.117347917375896 -0.15184270218588558 VSNS(ph)PPLGR ddPTM_A549_PD325901_60min_R1 2 VSNSPPLGR 9 0 H0Y9Y2 H0Y9Y2 BOD1L1 1 VS(0.011)NS(0.989)PPLGR;VS(0.006)NS(0.994)PPLGR 62.338 0.007225 26091000.0 8065.299999999999 8104.4 9103.2 8757.400000000001 9612.599999999999 8228.7 9156.400000000001 9524.900000000001 9625.3 10174.7 10399.7 True False 8884.083318639945 8787.38623039427 9720.997893988544 9298.324708501565 8937.444137669721 8161.688195416793 9504.851812574334 9334.918397360501 9220.782113882397 9532.26770557484 9120.602829129952 0.9740675572743288 0.9634655071623738 1.0658284409601757 1.0194857601740965 0.9799181375516927 0.8948628011023002 1.0421297792090172 1.0234979608525496 1.010983844667864 1.0451357091364715 1.0 13.154913467588743 VSPGLPS(ph)PNLENGAPAVGPVQPR ddPTM_A549_MK2206_60min_R1 1 VSPGLPSPNLENGAPAVGPVQPR 23 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 VS(0.261)PGLPS(0.739)PNLENGAPAVGPVQPR 57.338 0.0033413 29583000.0 1171.6 680.18 748.1 1054.8 1105.7 936.1 766.39 750.88 1228.6 1317.0 1279.9 True False 1369.3374371301154 714.798256716324 854.1918290953932 1313.2260473517706 943.0529947119329 1035.1574806671103 905.6331426871566 857.3195394735567 950.3240616710461 1019.4887853037757 962.065506557025 1.423330768848171 0.7429829381103119 0.8878728353460226 1.3650068923596017 0.9802378198620458 1.0759740096822117 0.9413424933278975 0.8911238721588449 0.9877955868847245 1.059687493580612 1.0 9.909991319495052 -7.749149038463591 24.48181756495897 0.9811100799683307 1.0637416625708984 0.0679414158521654 0.18519240951004273 481.70142550086166 959524.3398787176 0.02641340750915602 0.03900778862254932 1.781767206794046e-08 7.749149038463591 0.08263158260256775 VSPGLPS(ph)PNLENGAPAVGPVQPR ddPTM_A549_PD325901_60min_R1 1 VSPGLPSPNLENGAPAVGPVQPR 23 0 Q9UGP4;C9JRJ5 Q9UGP4 LIMD1 LIM domain-containing protein 1 1 VS(0.001)PGLPS(0.999)PNLENGAPAVGPVQPR 131.25 5.1296e-22 33376000.0 967.67 1060.6 1253.0 1082.8 1336.7 1154.1 1330.6 792.43 1281.3 1156.2 1366.3 True False 1065.9071460389964 1149.9804841760238 1338.036114901095 1149.682096782777 1242.8148033646582 1144.701392240636 1381.2367111322583 776.6243620006909 1227.451416840774 1083.1973346816742 1198.2537616893044 0.889550427562418 0.9597136440905266 1.1166550506085828 0.9594646255580699 1.0371883177838153 0.9553079897089829 1.152708011686092 0.6481301263814118 1.0243668378810735 0.9039799158690535 1.0 10.226717753692183 -7.610010298249236 0.0034292623318427228 1.9734353740138504 1.0821069878754603e-05 0.0 0.13000099264140833 118605.30084840344 172.90199598112284 49352.78789631248 50142.42807473671 2.4546507088563614e-08 7.610010298249236 -1.9734245529439716 VSPGRT(ph)SDPNPAAPDSESVIVAMER ddPTM_A549_MK2206_60min_R1 1 VSPGRTSDPNPAAPDSESVIVAMER 25 1 P42858 P42858 HTT Huntingtin 1 VS(0.113)PGRT(0.443)S(0.443)DPNPAAPDSESVIVAMER 57.496 0.00096275 1624600.0 791.19 918.14 883.93 1011.2 685.75 1215.4 813.06 611.13 1389.5 918.61 1331.5 True False 924.7235292616733 964.8694043069855 1009.2845655557963 1258.9440453944928 584.8770834075317 1344.0128212827751 960.7824775808922 697.7595490071315 1074.7804685755493 711.095362997647 1000.8518024694733 0.9239365178541286 0.9640482256476874 1.0084255861512326 1.2578725864190983 0.5843793076701491 1.3428689621846073 0.9599647772130547 0.6971657015409268 1.0738657470803035 0.7104901657199503 1.0 9.96701265277136 VSPGRT(ph)SDPNPAAPDSESVIVAMER ddPTM_A549_PD325901_60min_R1 2 VSPGRTSDPNPAAPDSESVIVAMER 25 1 P42858 P42858 HTT Huntingtin 1 VS(0.098)PGRT(0.451)S(0.451)DPNPAAPDSESVIVAMER;VS(0.157)PGRT(0.422)S(0.422)DPNPAAPDSESVIVAMER 66.454 8.4215e-05 9787000.0 3973.4 4489.5 4874.5 4571.0 5938.8 4561.1 4091.3 4017.5 4158.799999999999 4425.9 5239.0 True False 4376.776642937519 4867.845920901622 5205.312882749712 4853.340288505794 5521.679175747766 4523.955913827887 4246.996660345265 3937.3678108322197 3984.0200986165737 4146.447918671181 4594.6362127572775 0.9525839348902403 1.0594627508018506 1.1329107772007836 1.0563056711715737 1.2017663466840964 0.9846167801635433 0.9243379592389119 0.8569487612316045 0.8671024024828576 0.9024540195714134 1.0 12.165734923145335 -7.497612262143707 9.187775419316639 0.928597008454796 1.0822841866026098 0.5888997094635979 0.06713184527782382 0.237576449261887 82.1082372862191 0.011401492962585694 0.017945416637266034 3.179711648444391e-08 7.497612262143707 0.15368717814781385 VSPKS(ph)PPTDQK ddPTM_A549_MK2206_60min_R1 2 VSPKSPPTDQK 11 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VS(0.013)PKS(0.935)PPT(0.052)DQK;VS(0.354)PKS(0.631)PPT(0.014)DQK 58.885 0.0029335999999999997 42966000.0 4277.0 5118.4 5193.799999999999 6182.9 7106.299999999999 4641.8 4585.7 4924.1 8716.1 7597.799999999999 8093.3 True False 4998.853037389471 5378.904697545994 5930.358938585287 7697.710777560924 6060.972683658687 5132.992195022531 5418.86233173775 5622.106254423798 6741.917266751593 5881.451703098728 6083.510246283283 0.8217053699290664 0.8841777986372642 0.9748251746939092 1.2653403160229468 0.9962953029234454 0.8437550011785596 0.8907459858472994 0.924154974154703 1.1082281435903825 0.9667858629303695 1.0 12.57068829806331 -8.751762621639198 24.980795441211328 1.0511077360864716 0.9552713083772509 0.061728884171704745 0.11741721527872127 337.3556499194465 870891.5553220055 0.021164839378853516 0.023850281886466516 1.7710767357926854e-09 8.751762621639198 -0.09583642770922063 VSPKS(ph)PPTDQK ddPTM_A549_PD325901_60min_R1 2 VSPKSPPTDQK 11 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VS(0.077)PKS(0.919)PPT(0.004)DQK;VS(0.007)PKS(0.952)PPT(0.041)DQK 77.77600000000001 0.00030992 74098000.0 9413.900000000001 11137.0 8931.7 10117.8 12192.8 11407.0 11078.4 11331.8 11820.400000000001 11434.8 11476.9 True False 10369.592197853108 12075.554075304906 9537.858872675273 10742.75352680899 11336.419790876498 11314.10517397879 11499.994574333092 11105.778359374875 11323.629694548263 10712.804776524825 10065.314058063364 1.030230367183226 1.199719552280749 0.9475967483632024 1.067304354820695 1.1262857498018004 1.1240687681190649 1.14253708408834 1.103371270415352 1.1250150396923637 1.0643289136063026 1.0 13.297104567500886 -10.83182132097598 1.0592942759777324 0.9995792705746765 1.0989430748787161 0.09913885058872274 0.06493323550858206 0.5730476967324805 1.1335026094857847 0.04246050562955458 0.010276077588455173 1.472918371252759e-11 10.83182132097598 0.09936380430403957 VSPKS(ph)PPTDQKK ddPTM_A549_PD325901_60min_R1 1 VSPKSPPTDQKK 12 2 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VS(0.105)PKS(0.828)PPT(0.067)DQKK 56.513999999999996 0.003327 21044000.0 3495.6 3331.4 3461.6 3673.3 4572.9 4300.1 3909.5 4653.2 4503.2 4691.1 4620.1 True False 3850.4707386752884 3612.1487695493165 3696.5249922918065 3900.191398330414 4251.715279648572 4265.081411293613 4058.278161860485 4560.388275635215 4313.946164299836 4394.903145411867 4051.8569892269325 0.9502977891156846 0.8914798274354917 0.91230391450639 0.962568868718771 1.0493251096850214 1.0526238765666216 1.001584748092202 1.1255057342251624 1.0646837180506976 1.084663934856789 1.0 11.984367539607131 -6.585583905991204 3.1847677760449944 1.0390886967428867 0.9166051980153956 0.7195109405998401 0.03738992841525584 0.1141114182376958 2.3443532610490667 0.005703284462380924 0.012996016001240377 2.596666015284934e-07 6.585583905991204 -0.12248349872749109 VSPLNLSSVT(ph)P ddPTM_A549_MK2206_60min_R1 2 VSPLNLSSVTP 11 0 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 VSPLNLS(0.005)S(0.023)VT(0.971)P;VSPLNLSS(0.001)VT(0.999)P 93.258 0.00030837 1443520.0 236.38 359.98 547.5699999999999 458.77 367.08000000000004 392.59 300.61 261.5 787.5 771.1700000000001 509.17 True False 276.2751650638583 378.30144440110297 625.2236597483824 571.1686705949676 313.08301826793553 434.13361321984894 355.22694584113333 298.5684258101631 609.1325073790894 596.9621613991746 382.7290366228927 0.7218557742617145 0.9884315225704908 1.633593482389533 1.4923578196073652 0.818027869091155 1.1343106262606508 0.9281421367335202 0.7801039305631414 1.5915502851676095 1.5597514279727052 1.0 8.580179548326816 -8.759764337341137 24.999997377930995 1.2793431697904438 1.0828444674005304 0.15260949685262126 0.3093612903912384 102.52412235482137 1530171.7626443158 0.059149253061004436 0.06537010306316657 1.7387440732865578e-09 8.759764337341137 -0.1964987023899134 VSPLNLSSVT(ph)P ddPTM_A549_PD325901_60min_R1 2 VSPLNLSSVTP 11 0 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 VSPLNLSS(0.003)VT(0.997)P;VSPLNLSSVT(1)P 104.79 0.0001984 6817200.0 457.07 409.33 543.1700000000001 444.34000000000003 755.77 517.21 565.1800000000001 609.76 587.22 552.63 531.98 True False 503.47140992284994 443.8256756437598 580.0327825465511 471.7858726306421 702.6873224649576 512.998013240429 586.6882341783631 597.5978584525341 562.5411855125574 517.7368474875744 466.54983249906775 1.0791374786826355 0.9512931839808272 1.2432386470693033 1.0112228957484082 1.5061356226429716 1.0995567407935016 1.257503900571083 1.2808875211711241 1.2057472671232423 1.1097139285514779 1.0 8.86588737430228 -4.020440637175827 9.694671579216838 1.1373561366235159 1.1497464794248848 0.0 0.15430239754894548 0.0 0.0 0.02060790593778026 0.0 9.540241375370954e-05 4.020440637175827 0.01239034280136897 VSPQDANPLMANGT(ph)LTR ddPTM_A549_MK2206_60min_R1 5 VSPQDANPLMANGTLTR 17 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VSPQDANPLMANGT(0.988)LT(0.012)R;VSPQDANPLMANGT(0.953)LT(0.047)R;VSPQDANPLMANGT(0.997)LT(0.003)R;VSPQDANPLMANGT(0.964)LT(0.036)R;VSPQDANPLMANGT(0.946)LT(0.054)R 184.5 3.2103e-39 159364700.0 10307.2 12228.999999999998 11352.300000000001 10171.7 16144.6 12099.8 12340.400000000001 12173.5 16669.3 17473.3 16781.7 True False 12046.803373154253 12851.40386571779 12962.226843255761 12663.766956624966 13769.750726622296 13380.192804802795 14582.490943275077 13899.13090478018 12893.73016540222 13526.069394266107 12614.340738642102 0.9550085591275266 1.0187931444050407 1.0275786195903178 1.0039182561345799 1.0915949562422056 1.0607128094942466 1.1560248169453555 1.1018515507673199 1.0221485555645609 1.0722771545904943 1.0 13.62277718848394 -4.776959194751137 1.2620536470695152 1.0361998595986552 0.7989077752899234 0.18188646235658723 0.04880326149316357 6.35055884283756 3.6856427392004725 0.00815427232739485 2.63635177900709 1.6712476332800486e-05 4.776959194751137 -0.23729208430873183 VSPQDANPLMANGT(ph)LTR ddPTM_A549_PD325901_60min_R1 7 VSPQDANPLMANGTLTR 17 0 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VSPQDANPLMANGT(0.985)LT(0.015)R;VSPQDANPLMANGT(0.995)LT(0.005)R;VSPQDANPLMANGT(0.956)LT(0.044)R;VSPQDANPLMANGT(0.832)LT(0.168)R;VSPQDANPLMANGT(0.998)LT(0.002)R;VSPQDANPLMANGT(0.995)LT(0.005)R;VSPQDANPLMANGT(0.999)LT(0.001)R 219.99 7.386700000000001e-56 191221000.0 26605.699999999997 29370.800000000003 31670.2 31769.8 36211.8 33134.5 31936.000000000004 34057.4 34415.1 36376.799999999996 38700.0 True False 29306.691077918866 31845.980392831552 33819.53022038363 33732.1483915492 33668.40809192814 32864.66361770846 33151.34195604974 33378.09843948656 32968.75302873405 34079.96263989646 33940.145339512615 0.863481602236996 0.9382982917211298 0.9964462403468684 0.9938716541758215 0.9919936333546538 0.9683124008148516 0.976758986280929 0.9834400561811464 0.9713792530626648 1.0041195256822035 1.0 15.05070512239541 -5.3893292765773975 2.4748395820422306 0.9855027323448018 0.8526112975843622 0.9084062844369192 0.011674952398616939 0.08874554852058605 0.7989651895519363 0.001779453014640636 0.021809857023610938 4.0800992107501955e-06 5.3893292765773975 -0.13289143476043963 VSPQDANPLMANGT(ph)LTRR ddPTM_A549_MK2206_60min_R1 4 VSPQDANPLMANGTLTRR 18 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VSPQDANPLMANGT(0.626)LT(0.374)RR;VSPQDANPLMANGT(0.702)LT(0.298)RR;VSPQDANPLMANGT(0.76)LT(0.24)RR;VSPQDANPLMANGT(0.791)LT(0.209)RR 57.068000000000005 0.0047286 56961900.0 5039.5 5524.599999999999 4659.49 4948.0 6786.7 4477.04 4874.900000000001 5218.000000000001 8305.8 6816.799999999999 8419.8 True False 5890.044396054301 5805.778542525515 5320.275746226036 6160.260222124163 5788.385420287124 4950.797401181366 5760.606228272314 5957.667479454799 6424.549561637134 5276.8801455267885 6328.931285341699 0.9306538703771529 0.9173394813073976 0.8406278258302807 0.9733492029518174 0.9145912886893683 0.7822485626677289 0.9102020496911272 0.9413386258835238 1.0151081236285333 0.8337711230565036 1.0 12.627746188816753 -8.539604381624196 2.726778475636519 1.007228090699689 0.8940014655102527 0.0 0.07039819985556588 0.15236588033309273 2.2887448944651982 0.008140758660563319 0.009499802818749748 2.8866598941091055e-09 8.539604381624196 -0.11322662518943638 VSPQDANPLMANGT(ph)LTRR ddPTM_A549_PD325901_60min_R1 4 VSPQDANPLMANGTLTRR 18 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VSPQDANPLMANGT(0.996)LT(0.004)RR;VSPQDANPLMANGT(0.791)LT(0.209)RR;VSPQDANPLMANGT(0.77)LT(0.23)RR;VSPQDANPLMANGT(0.756)LT(0.244)RR 192.63 1.1315e-40 243353000.0 9039.0 8868.2 9506.7 10279.5 10803.7 10922.199999999999 9203.1 10340.300000000001 12478.2 11247.099999999999 11691.7 True False 9956.632625839902 9615.554336950605 10151.881830431155 10914.441368561644 10044.885382741648 10833.253224443868 9553.32900662956 10134.054604691579 11953.78464810939 10536.956186557905 10253.695019792758 0.9710287468683791 0.9377648075537309 0.9900705853679993 1.0644398285197134 0.9796356692247971 1.0565218883078136 0.9316962312794287 0.9883319705852147 1.1658026326153585 1.0276252771531011 1.0 13.323856272315771 -8.687728133119665 24.999950364701075 1.0782963545494237 0.9906195210116121 0.2596358728002037 0.05470862389858386 41.313191963902575 14010.803145032354 0.011621278118609695 0.01317728889717307 2.0524466014089223e-09 8.687728133119665 -0.08767683353781164 VSPQDANPLMANGTLT(ph)RR ddPTM_A549_MK2206_60min_R1 2 VSPQDANPLMANGTLTRR 18 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 VSPQDANPLMANGT(0.365)LT(0.635)RR;VSPQDANPLMANGT(0.406)LT(0.594)RR 98.12100000000001 7.7831e-07 39990700.0 2381.6 2978.7 2474.8 2862.4 3669.6 3179.7 2484.8 2923.6 4502.3 3627.2 4323.3 True False 2783.5558554703684 3130.303106943623 2825.7638532887067 3563.68812849802 3129.8067010897275 3516.1737434859638 2936.2559962278324 3338.029253149492 3482.5362386957145 2807.813000800192 3249.7052929900674 0.8565563965060989 0.9632575340588555 0.8695446505208199 1.0966188645429615 0.9631047799445159 1.0819977279388058 0.9035453161127023 1.0271790676988304 1.0716467878511589 0.8640208103968442 1.0 11.666093174612401 -6.250818733888648 24.984419940356194 1.0264786850350958 0.9031333224958377 0.22680793056944215 0.07578542722060623 459.7668756772297 1081571.2050746281 0.007733555427734422 0.02022274937344163 5.612821954749982e-07 6.250818733888648 -0.1233453625392581 VSPS(ph)KSPSLSPSPPS(ph)PLEKTPLGER ddPTM_A549_PD325901_60min_R1 1 VSPSKSPSLSPSPPSPLEKTPLGER 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.13)PS(0.359)KS(0.359)PS(0.141)LS(0.014)PS(0.004)PPS(0.99)PLEKT(0.004)PLGER 66.01 7.1443e-05 7482600.0 981.1 1258.6 1231.1 1490.5 1541.6 1708.0 1764.5 1681.3 1584.7 1689.8 1870.8 True False 1080.7005497523537 1364.6666390570847 1314.6498492056962 1582.5647998288962 1433.3233342312838 1694.0906142855952 1831.6490130714478 1647.7651525456652 1518.1005699426953 1583.105739616927 1640.7034599782985 0.6586812157796316 0.8317570312645864 0.8012720648636196 0.964564797010807 0.8736029204511108 1.0325391855442316 1.1163802952519373 1.0043040639211305 0.9252741930359403 0.9648944969238175 1.0 10.680098795007853 -5.552992712003946 0.8005131494474728 0.9809575055602565 0.5812443733243912 0.7310810253533875 0.06270481043904827 0.7689463254282795 0.45586281729017203 0.010733160426607484 0.24782497430986963 2.799028290380764e-06 5.552992712003946 -0.39971313223586535 VSPSKS(ph)PSLS(ph)PS(ph)PPSPLEK ddPTM_A549_PD325901_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VS(0.01)PS(0.179)KS(0.751)PS(0.088)LS(0.967)PS(0.776)PPS(0.229)PLEK 94.01899999999999 7.7741e-07 38768000.0 9673.4 9527.6 9605.9 9710.0 11244.0 10771.0 10960.0 10842.0 11610.0 11834.0 12610.0 True False 10655.436446819296 10330.524289115108 10257.814138969214 10309.764646989994 10454.260229694188 10683.284547113662 11377.088797542125 10625.747804615537 11122.072074862563 11086.799220396922 11059.049941376079 0.963503782269152 0.9341240290872291 0.9275493096916816 0.9322468658376588 0.9453126882609378 0.966021909996397 1.0287582439587457 0.9608192259681011 1.005698693271173 1.0025091919439681 1.0 13.432939831691858 -7.497177282302378 3.4977245241326465 1.0007631613368284 0.9393859558171267 0.7202991214919635 0.017430696244999315 0.08697470981703824 2.224759895286434 0.0025129245546330237 0.00399345089094932 3.1828979734009725e-08 7.497177282302378 -0.061377205519701716 VSPSKS(ph)PSLS(ph)PSPPS(ph)PLEK ddPTM_A549_MK2206_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VS(0.196)PS(0.259)KS(0.305)PS(0.358)LS(0.541)PS(0.356)PPS(0.985)PLEK 47.38 0.0047664 3358100.0 1658.0 2117.6 2022.1 1503.5 2557.1 1962.6 2094.8 2230.7 2837.3 2757.5 2941.3 True False 1937.8298657918494 2225.3767949990993 2308.8641860898215 1871.8575674946808 2180.953977369886 2170.281029331558 2475.3980444696 2546.908556232238 2194.6560802370673 2134.5788348330752 2210.894034249691 0.8764915169032463 1.0065506354104048 1.0443124592687134 0.846651869559154 0.9864579412599639 0.9816305058998833 1.1196366746313438 1.1519812875593471 0.9926554806512315 0.9654821994024175 1.0 11.110414164666514 -7.302739653799962 3.2437508928098127 1.0195107400099805 0.9532366585511185 0.22934466900713302 0.07480973140209375 0.4031622402991873 8.6217256644118 0.011691148103648772 0.019858101894375802 4.9803555252263585e-08 7.302739653799962 -0.06627408145886204 VSPSKS(ph)PSLS(ph)PSPPS(ph)PLEK ddPTM_A549_PD325901_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VS(0.022)PS(0.231)KS(0.68)PS(0.075)LS(0.694)PS(0.333)PPS(0.964)PLEK 88.541 1.4627000000000002e-06 31817000.0 7923.8 9035.8 7718.7 7982.1 10141.0 8951.2 9665.1 10531.0 8315.4 9782.9 10464.0 True False 8728.218342806742 9797.278577142863 8242.537398313716 8475.136188335613 9428.73114455077 8878.3043949609 10032.910669445659 10320.950943590316 7965.93265558244 9165.20602443984 9176.994336761241 0.9510977148414715 1.0675912196978137 0.8981739658807161 0.9235198233026992 1.0274312916137607 0.9674523127246741 1.093267610426192 1.1246548232297158 0.8680328616606501 0.9987154495373087 1.0 13.163806001974358 -8.795560536896799 24.999847077488038 0.937682220198054 1.0045669969676656 0.07104802276186595 0.07469207535216481 288.5223316755529 211392.94399203928 0.014177498863255237 0.015093486594987682 1.6011774424930932e-09 8.795560536896799 0.06688477676961158 VSPSKS(ph)PSLS(ph)PSPPSPLEK ddPTM_A549_PD325901_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.015)PS(0.029)KS(0.92)PS(0.036)LS(0.945)PS(0.054)PPSPLEK 150.72 1.1935e-21 21328000.0 6003.8 6984.9 7276.0 7013.7 8324.4 7040.8 6530.4 6075.0 5706.2 4689.2 5230.0 True False 6613.301356236042 7573.542036508681 7769.79311414235 7446.920319731586 7739.72286162098 6983.462059169804 6778.917945572 5953.829359254695 5466.388257845022 4393.123111736121 4586.743155701574 1.441829448857485 1.6511807571117976 1.6939673424887698 1.6235747385319916 1.687411437459732 1.5225317446626538 1.4779371147358515 1.298051614652492 1.1917798909341588 0.957787031583669 1.0 12.163254407610578 -8.4956161425893 0.7653060761922801 1.0496379282763237 1.6350248145368589 0.9098503409810254 0.07640417431307553 0.10944004254388988 0.1300072907819196 0.01800208792671932 0.021398560981912198 3.1943599886459184e-09 8.4956161425893 0.5853868862605351 VSPSKS(ph)PSLSPSPPS(ph)PLEK ddPTM_A549_MK2206_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.022)PS(0.163)KS(0.773)PS(0.041)LS(0.009)PS(0.09)PPS(0.902)PLEK 99.954 4.295e-08 34548000.0 2575.0 2700.8 3039.7 2520.2 3847.6 2802.1 2838.0 2818.0 4262.1 3702.0 4147.3 True False 3009.5970472943395 2838.2591839504935 3470.7751676263442 3137.649113136075 3281.6231368849003 3098.6163621165592 3353.6278643329792 3217.460129763055 3296.741155175132 2865.715628849337 3117.4109503429563 0.9654155628609837 0.9104539725948699 1.1133518239693465 1.0064919778352905 1.052675822712395 0.9939710905858179 1.0757734279351383 1.0320936767765867 1.0575253656603878 0.9192614238216077 1.0 11.60613263434542 -5.740181217371855 24.999995166292955 1.0336589419082396 0.9379347252581093 0.3232953132752815 0.04963648024454896 139.45412920409842 163998.1234738997 0.004770804059656048 0.018439897324541727 1.818941713304307e-06 5.740181217371855 -0.09572421665013031 VSPSKS(ph)PSLSPSPPSPLEK ddPTM_A549_PD325901_60min_R1 2 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSPS(0.026)KS(0.792)PS(0.18)LS(0.001)PSPPSPLEK;VS(0.001)PS(0.217)KS(0.716)PS(0.066)LSPSPPSPLEK 122.68 6.905e-15 56788000.0 23082.3 22519.1 23434.7 22190.5 27409.0 23829.5 23625.8 20525.6 20357.5 17056.9 19044.9 True False 25425.59810370883 24416.863587788335 25025.11966629905 23561.156786717955 25483.88639591677 23635.440452645536 24524.89274753382 20116.200805978293 19501.94507011323 15979.92442305124 16702.498035568056 1.5222631997659803 1.4618689692878573 1.4982860415853922 1.4106367045542738 1.5257529946507822 1.4150841629984774 1.4683368137692898 1.2043827673645426 1.1676064878788632 0.956738590181056 1.0 14.027776268716536 -8.616224656248795 0.734050544543637 1.0391580182668179 1.4931453410064535 0.9208476261441096 0.05653903183585116 0.10323112198989731 0.11473701789263502 0.013647556474802786 0.015119952386754591 2.4197769961716327e-09 8.616224656248795 0.4539873227396356 VSPSKSPSLS(ph)PSPPS(ph)PLEK ddPTM_A549_PD325901_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.119)PS(0.144)KS(0.168)PS(0.212)LS(0.411)PS(0.022)PPS(0.923)PLEK 56.303000000000004 0.0023006999999999997 54403000.0 3619.0 4222.6 3804.8 4642.1 4571.9 4109.3 4817.5 4320.2 4874.0 5509.4 4380.0 True False 3986.3982158330127 4578.453321215989 4063.016608121058 4928.831974025975 4250.785516198759 4075.835223234074 5000.832598737151 4234.030221868666 4669.16272979157 5161.535543759912 3841.2877671076276 1.0377765107753563 1.1919058396042597 1.0577225280834364 1.2831196913261291 1.1066042884361853 1.0610595899986566 1.3018635681394486 1.102242393325497 1.2155201622156278 1.3436992635535845 1.0 11.90737433096481 -10.92344716670697 1.148558445693287 0.9989935844373591 1.1576164141959313 0.0 0.13262350167223025 0.4515152890616617 1.0470478995662282 0.05739790425165157 0.013193787911800672 1.1927593599669102e-11 10.92344716670697 0.15862282975857223 VSPSTSYT(ph)PSR ddPTM_A549_MK2206_60min_R1 4 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VSPSTSYT(0.992)PS(0.008)R;VSPSTSYT(1)PSR;VSPSTSYT(0.988)PS(0.012)R;VSPSTSYT(0.999)PS(0.001)R 228.93 9.423999999999999e-40 101043000.0 20020.4 19791.9 18804.8 17497.2 25715.699999999997 20028.1 18280.4 20068.2 29099.6 30799.3 29969.7 True False 23399.354068214212 20799.223171960075 21471.603405658414 21784.014785479154 21932.95459538179 22147.460248423187 21601.71205466968 22912.92880628494 22508.587062512448 23841.716738957173 22527.396368358546 1.03870654582526 0.9232857109565568 0.9531329344307594 0.9670009986629645 0.9736124955029559 0.9831344859511147 0.9589085086197949 1.0171139368093112 0.9991650475031142 1.058343199058933 1.0 14.459392961497603 -8.254638803943227 24.84546945352603 1.000907816711184 0.968981217557892 0.2868513484366314 0.03175665521436073 504.891923384746 1844590.5914295798 0.003921094526884075 0.005004116295487308 5.563667866239886e-09 8.254638803943227 -0.03192659915329199 VSPSTSYT(ph)PSR ddPTM_A549_PD325901_60min_R1 2 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VSPSTSYT(0.992)PS(0.008)R;VSPSTS(0.001)YT(0.992)PS(0.006)R 157.03 3.447e-13 159079000.0 11318.2 13588.5 11438.4 15419.2 14012.1 14134.6 12391.7 13040.2 13978.3 12783.7 16395.2 True False 12467.215331981542 14733.650583844892 12214.678608686903 16371.608964456032 13027.938435120768 14019.492503911695 12863.272924498426 12780.102981161002 13390.840661847647 11976.535000320104 14378.694337735848 0.8670617122211322 1.0246862641190924 0.8494984538777182 1.1386019189162346 0.9060585147101905 0.9750184665320096 0.8946064658137765 0.8888222171619952 0.9312974006759676 0.8329361984480433 1.0 13.811645056856928 -10.762201030696069 1.1214509426319639 0.9986466711779478 0.943884375389077 0.0 0.0924776303189364 1.0834414372922991 2.508473934959953 0.04362684607290928 0.012260416521000161 1.7290158293223607e-11 10.762201030696069 -0.05476229578887082 VSPTTSPRPAS(ph)PVPGSER ddPTM_A549_PD325901_60min_R1 2 VSPTTSPRPASPVPGSER 18 1 A0A5E8;Q99501;Q99501-2;Q99501-4 A0A5E8 GAS2L1 GAS2-like protein 1 1 VS(0.003)PT(0.05)T(0.05)S(0.056)PRPAS(0.796)PVPGS(0.045)ER;VS(0.001)PT(0.012)T(0.012)S(0.059)PRPAS(0.903)PVPGS(0.012)ER 69.133 0.00040817 34396000.0 7669.900000000001 8081.6 8021.8 8953.9 10083.9 8233.4 8886.8 8151.1 9088.3 9532.8 9464.2 True False 8448.542601718042 8762.664794377668 8566.207587002085 9506.962067217675 9375.641651566453 8166.349920175071 9224.992037043556 7988.519916085751 8706.350356414587 8930.897381122175 8300.163398506853 1.0178766605050067 1.0557219627693133 1.0320528856748883 1.1453945676452488 1.129573142289352 0.9838782115595635 1.1114229436378413 0.962453331644391 1.0489372242937778 1.0759905501051688 1.0 13.0189240225548 -8.251532707556468 24.92004078748119 1.019205750132237 1.0682454550384701 0.1506477053119908 0.052567816497788765 868.190886531066 2183914.610497708 0.007989971556922881 0.010250975612358115 5.603602139646927e-09 8.251532707556468 0.04903970490623322 VSQGSAESLS(ph)PSFR ddPTM_A549_MK2206_60min_R1 2 VSQGSAESLSPSFR 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 VSQGSAES(0.053)LS(0.909)PS(0.037)FR;VSQGSAES(0.048)LS(0.751)PS(0.201)FR 159.4 4.2032e-19 92105000.0 3325.1 3792.0 3157.3 3100.9 4689.7 3336.5 2759.8 2987.2 4504.1 4853.6 5474.4 True False 3886.295589110057 3984.9966030584533 3605.052615964292 3860.6206392046884 3999.8513424080234 3689.5662154105466 3261.2199365701726 3410.6447479163267 3483.9285415697236 3757.1683890284025 4114.955394246252 0.9444320087999206 0.9684179344034899 0.8760854664439539 0.9381925851742676 0.9720278737409468 0.8966236233251746 0.792528624035678 0.8288412439865741 0.8466503783834782 0.9130520331476434 1.0 12.006661076706676 VSQGSAESLS(ph)PSFR ddPTM_A549_PD325901_60min_R1 1 VSQGSAESLSPSFR 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 VSQGSAES(0.01)LS(0.99)PSFR 263.62 1.9484999999999995e-83 67032000.0 11062.0 10926.0 9557.0 10425.0 13546.0 11062.0 12249.0 13350.0 17778.0 20915.0 21807.0 True False 12185.006096586016 11846.772364800328 10205.595490909625 11068.92857310717 12594.575691163063 10971.914739594418 12715.142397909982 13083.723777127596 17030.852484660332 19594.423330623777 19124.87724596258 0.637128591199631 0.6194430538005822 0.5336293331275688 0.5787712219404657 0.6585441322935488 0.5736985706358289 0.6648483142862658 0.6841206669647868 0.8905078064360223 1.0245515868479795 1.0 14.223162867369934 -8.752899010265581 1.106588482907667 0.9688340855364013 0.5966319385736555 0.9317982699307253 0.043208762651113536 0.0714152834514714 0.17332946237666308 0.009095213383944678 0.009646191105276753 1.766448538381757e-09 8.752899010265581 -0.3722021469627458 VSQS(ph)PSKDSEENPATEERPEK ddPTM_A549_MK2206_60min_R1 2 VSQSPSKDSEENPATEERPEK 21 2 D6RC71;D6RF48;Q9P2W9 D6RC71 STX18 Syntaxin-18 1 VS(0.007)QS(0.783)PS(0.21)KDSEENPATEERPEK;VS(0.186)QS(0.657)PS(0.114)KDS(0.043)EENPATEERPEK 139.16 5.1817e-19 64878700.0 6525.8 7068.2 6431.200000000001 6666.200000000001 8440.3 6398.0 6770.209999999999 5955.200000000001 9620.9 9043.5 9685.3 True False 7627.195499508111 7427.94118927684 7343.240865229646 8299.41929925709 7198.743050797804 7075.032113351321 8000.269521982298 6799.367837035115 7441.781511420289 7000.567069016471 7280.172709318505 1.047666834846572 1.0202973865948528 1.0086630027101438 1.140003078310761 0.9888148726998643 0.9718220151968912 1.0989120507734769 0.9339569414791538 1.0221984846451413 0.9615935429740363 1.0 12.82975696089949 VSQS(ph)PSKDSEENPATEERPEK ddPTM_A549_PD325901_60min_R1 1 VSQSPSKDSEENPATEERPEK 21 2 D6RC71;D6RF48;Q9P2W9 D6RC71 STX18 Syntaxin-18 1 VSQS(0.973)PS(0.027)KDSEENPATEERPEK 200.99 2.5900999999999997e-56 147260000.0 7158.3 7349.7 7292.2 8047.3 8456.3 8442.1 8766.6 7891.7 7897.4 8573.1 7800.4 True False 7885.005346338061 7969.085012774391 7787.092543560872 8544.363444255667 7862.358660651276 8373.350336569332 9100.217760267593 7734.293852581119 7565.499741948285 8031.793002905603 6841.000250809666 1.1526100069072256 1.1649005584864889 1.1382973626757624 1.2489932949855396 1.1492995720502608 1.2239950342902421 1.3302466637375927 1.1305793844497707 1.1059054910943573 1.1740670528341235 1.0 12.739991567577349 -9.271388406914019 0.981873278284769 1.024448494425598 1.1962323875687975 0.1833657667728763 0.07256974891099235 0.22910125402895748 0.4653405243277032 0.015779603229679803 0.012805370177867538 5.353176873596103e-10 9.271388406914019 0.17178389314319942 VSQSALNPHQS(ph)PDFK ddPTM_A549_PD325901_60min_R1 1 VSQSALNPHQSPDFK 15 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 VSQSALNPHQS(1)PDFK 86.74799999999999 1.3299000000000001e-05 5583600.0 2910.6 2967.5 3237.9 2874.5 3920.8 3407.6 3010.0 3338.8 3691.6 3217.6 3730.2 True False 3206.081969329529 3217.5816394421568 3457.6433650744275 3052.051336536842 3645.4165340257023 3379.8496353861774 3124.5471971352017 3272.2050147620694 3536.4548898848084 3014.44018688095 3271.4090476860442 0.9800309049084758 0.9835461088909193 1.056927860342048 0.9329470243703214 1.1143261147988215 1.0331479757252724 0.9551074633559744 1.00024331016526 1.0810188632284423 0.92145009778375 1.0 11.675696445847514 -4.406924318403879 0.5412086090098897 1.0321951233154836 0.8598119947697243 0.0 0.060463011419399706 15.940783861549194 1.6037161788498864 0.009519441239209718 2.1428920476180835 3.9181014929442444e-05 4.406924318403879 -0.17238312854575932 VSQSALNPHQS(ph)PDFKR ddPTM_A549_MK2206_60min_R1 2 VSQSALNPHQSPDFKR 16 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 VSQSALNPHQS(1)PDFKR;VSQSALNPHQS(1)PDFKR 126.69 2.9276999999999997e-09 22875000.0 4776.700000000001 4949.0 5415.7 5258.299999999999 8009.700000000001 5913.0 5167.1 5588.5 9484.9 9487.5 9116.3 True False 5582.890180897424 5200.882961111893 6183.727695270587 6546.583736054058 6831.483740385434 6538.709735268264 6105.895185974255 6380.686989063464 7336.58529427292 7344.267160645085 6852.471112919609 0.8147265546835324 0.7589791880050655 0.9024084295097315 0.9553610118415774 0.9969372548693266 0.9542119372003216 0.8910501168640077 0.9311512422187894 1.0706481170625535 1.0717691529991635 1.0 12.742408625942183 -4.488697432621481 0.3272709368709001 1.0298761833806198 0.4002842454986296 0.6549062179199124 0.05432087370162179 4.885839516554568 0.2471227146966857 0.018987907632529097 1.350497867345392 3.245656593193818e-05 4.488697432621481 -0.6295919378819902 VSQSALNPHQS(ph)PDFKR ddPTM_A549_PD325901_60min_R1 4 VSQSALNPHQSPDFKR 16 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 VSQSALNPHQS(1)PDFKR;VSQSALNPHQS(1)PDFKR;VSQS(0.001)ALNPHQS(0.999)PDFKR;VSQSALNPHQS(1)PDFKR 113.99 8.2291e-08 149211000.0 8070.46 9264.099999999999 9788.599999999999 9829.5 11494.7 11603.6 11746.4 11613.699999999999 11285.8 10789.7 12042.8 True False 8889.767158041363 10044.818219361774 10452.913259633564 10436.645890585803 10687.351926562236 11509.10412876132 12193.415679876718 11382.055642728594 10811.497073426688 10108.436500618272 10561.61194559903 0.8417055278901516 0.9510686693566126 0.9897081348448179 0.9881678994023919 1.011905377854334 1.0897109445075859 1.154503284411775 1.0776816741000825 1.0236597528023914 0.9570922083376114 1.0 13.366542419591166 -4.960685136415795 0.8951655954884455 1.0319115368810305 0.6418589890750181 0.5738699329432853 0.05114876100624625 2.0474603970376886 0.8506222702104604 0.00829879948273815 0.8841100013293852 1.0947497724263653e-05 4.960685136415795 -0.3900525478060124 VSQSPS(ph)KDSEENPATEERPEK ddPTM_A549_MK2206_60min_R1 4 VSQSPSKDSEENPATEERPEK 21 2 D6RC71;D6RF48;Q9P2W9 D6RC71 STX18 Syntaxin-18 1 VS(0.106)QS(0.372)PS(0.518)KDS(0.005)EENPATEERPEK;VS(0.12)QS(0.372)PS(0.503)KDS(0.005)EENPATEERPEK;VS(0.002)QS(0.321)PS(0.673)KDS(0.004)EENPATEERPEK;VS(0.034)QS(0.2)PS(0.765)KDS(0.001)EENPATEERPEK 149.66 1.2059e-22 129386200.0 11278.800000000001 12117.800000000001 12135.0 11326.699999999999 14620.0 11077.699999999999 11740.0 12947.599999999999 14914.3 17203.2 16486.4 True False 13182.385699814908 12734.544260691388 13855.925472627468 14101.742008474888 12469.417366996897 12249.934861217862 13873.006034978554 14782.961950362016 11536.234863243113 13316.985171858707 12392.37187850749 1.063750009203449 1.0276115327669708 1.1181011680789106 1.1379372848657017 1.0062171704694425 0.988506073035408 1.1194794806827075 1.1929081934670316 0.9309141927261556 1.07461148700313 1.0 13.597164722788 -8.79144745664702 24.999631343357027 0.967376135582535 1.0787129222918452 0.17132695799348874 0.06734095517325857 149.53994712881726 124580.58926000772 0.010986000049891283 0.011696199085283337 1.6164137769727432e-09 8.79144745664702 0.11133678670931024 VSQSPS(ph)KDSEENPATEERPEK ddPTM_A549_PD325901_60min_R1 2 VSQSPSKDSEENPATEERPEK 21 2 D6RC71;D6RF48;Q9P2W9 D6RC71 STX18 Syntaxin-18 1 VSQS(0.374)PS(0.626)KDSEENPATEERPEK;VS(0.024)QS(0.305)PS(0.556)KDS(0.115)EENPATEERPEK 207.13 2.4645e-57 154554000.0 11569.400000000001 11452.9 12587.3 11733.0 15024.9 12059.5 13239.5 14629.2 13370.099999999999 13507.9 13612.5 True False 12743.916971057875 12418.076076956047 13441.549871583851 12457.720762423645 13969.602857091088 11961.291430314483 13743.33641743238 14337.40912961462 12808.201192775183 12655.008888727365 11938.248796747172 1.0674862945166819 1.040192434282289 1.1259230813857963 1.0435132467517358 1.1701551119371378 1.0019301518974533 1.1512020440700685 1.2009641760457488 1.0728710224455238 1.0600389641884067 1.0 13.543303604967907 -9.924240191442033 1.0981420214008724 1.0110003271774322 1.097205843906554 0.1410730694438841 0.05972854431225643 0.4159180600059863 1.015861319148288 0.018406189338274186 0.010765677545914083 1.1905833604055754e-10 9.924240191442033 0.0862055167291218 VSRPYKIS(ph)ESSK ddPTM_A549_MK2206_60min_R1 2 VSRPYKISESSK 12 2 H3BQW5;H3BPB9;H3BQE9;Q8N4N3-2;Q8N4N3 H3BQW5 KLHL36 Kelch-like protein 36 1 VS(0.002)RPY(0.001)KIS(0.985)ES(0.008)S(0.003)K;VS(0.002)RPY(0.001)KIS(0.995)ES(0.002)S(0.001)K 54.236999999999995 0.0043181999999999995 19974700.0 4904.2 5854.4 5768.5 6181.6 9030.7 7935.5 7216.8 7417.2 11294.1 10689.6 11482.8 True False 5731.909063821706 6152.363953835815 6586.560040284425 7696.092277502573 7702.295992895955 8775.229342841421 8527.999144227704 8468.610814222335 8736.004382971645 8274.811935750373 8631.303850842258 0.6640838004170571 0.7127965901971411 0.7631013985959603 0.8916488644704096 0.8923676105023637 1.0166748262471514 0.988031390343827 0.9811508157479536 1.0121303263028065 0.9586977910577094 1.0 13.075362795058203 -6.268328253255277 0.832156871666438 1.0052877315206734 0.6381521869299814 0.957743095848937 0.025062017508393892 0.08552768167354251 0.0897008943847423 0.0031100301443185386 0.020958588216867684 5.391029977007224e-07 6.268328253255277 -0.367135544590692 VSRPYKIS(ph)ESSK ddPTM_A549_PD325901_60min_R1 2 VSRPYKISESSK 12 2 H3BQW5;H3BPB9;H3BQE9;Q8N4N3-2;Q8N4N3 H3BQW5 KLHL36 Kelch-like protein 36 1 VS(0.001)RPY(0.001)KIS(0.787)ES(0.166)S(0.045)K;VSRPYKIS(0.989)ES(0.009)S(0.002)K 69.331 0.00075737 35631000.0 7808.9 7920.200000000001 7902.9 8499.8 9952.0 10275.8 9469.2 9046.5 9656.8 8612.9 9816.4 True False 8601.653779391649 8587.66304994432 8439.238317998293 9024.813341553603 9253.005852536166 10192.117291730636 9829.555587745066 8866.060460658045 9250.958278426591 8069.080024113292 8609.045031286605 0.9991414550779911 0.99751633528869 0.9802757782458789 1.0482943588697737 1.0748004940047713 1.1838847694129722 1.141770725094704 1.029854116041606 1.074562654139591 0.9372793375791395 1.0 13.07163749847035 -6.332350158382027 5.345739656435036 1.0575307988868052 0.9929234855345691 0.19549509316909908 0.0621196809569072 0.2877220244814657 15.4400682545741 0.008688864706553723 0.020704619129690405 4.6521085696101494e-07 6.332350158382027 -0.06460731335223613 VSRS(ph)PGASR ddPTM_A549_MK2206_60min_R1 2 VSRSPGASR 9 1 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 VS(0.015)RS(0.959)PGAS(0.026)R;VS(0.005)RS(0.995)PGASR 77.813 0.00052501 294630000.0 3471.0 4017.0 3340.5 3252.5 3835.3 2333.0 2684.3 2431.7 4405.0 5176.9 5535.4 True False 4056.819942197531 4221.448142005755 3814.2331307220447 4049.3626460102732 3271.13245059119 2579.876511479935 3172.002563858004 2776.4009217689218 3407.2745333395414 4007.434694486799 4160.8074107319 0.9750078630733651 1.0145742701566636 0.9167050416426529 0.9732155916579607 0.7861773275432103 0.6200422794926059 0.7623526519580098 0.6672745570025178 0.8188974391247276 0.9631387129696247 1.0 12.02264779726677 -6.740319107778663 24.03969568757316 0.8518723842646767 0.9692706355666992 0.2786191633467081 0.11298614776483804 253.28006450763752 288287.8037249885 0.020113007968607478 0.04182933432625861 1.8183642829889358e-07 6.740319107778663 0.11739825130202253 VSRS(ph)PGASR ddPTM_A549_PD325901_60min_R1 2 VSRSPGASR 9 1 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 VS(0.04)RS(0.958)PGAS(0.002)R;VS(0.011)RS(0.987)PGAS(0.002)R 78.705 0.00050513 509320000.0 4036.3 3883.8999999999996 3770.8999999999996 4226.3 4622.799999999999 4624.2 4126.9 5330.4 4747.5 4343.2 4844.5 True False 4446.06220463299 4211.2098835482375 4026.815950263801 4487.348952376293 4298.110475794229 4586.542048348625 4283.951437826332 5224.080990382092 4547.979084875967 4068.969610784851 4248.657211815729 1.0464629135690842 0.9911860791773578 0.9477855589443703 1.05618051272688 1.0116397396902175 1.0795274411861755 1.008307148412079 1.2295840144160513 1.0704509349984292 0.9577072020470001 1.0 12.052791234158647 -6.294740656759375 24.4523073956413 1.0491587846865074 0.9947489516929121 0.11603228932244869 0.06923430748284286 782.6687184187277 574693.0895677236 0.009405353570879814 0.02185770935470175 5.072935531995537e-07 6.294740656759375 -0.05440983299359525 VSRS(ph)SFSSDPDEKAQDSK ddPTM_A549_PD325901_60min_R1 1 VSRSSFSSDPDEKAQDSK 18 2 P46013 P46013 MKI67 Antigen KI-67 1 VS(0.227)RS(0.384)S(0.384)FS(0.004)S(0.002)DPDEKAQDSK 59.428999999999995 0.00084527 12192000.0 1853.4 2032.5 2025.3 2208.5 2215.2 2885.8 2449.3 2480.6 2883.0 2419.5 3532.3 True False 2041.5558035990332 2203.7859080593707 2162.749037118266 2344.9140291325843 2059.611994025131 2862.2990015839405 2542.5094518083883 2431.1224870069473 2761.8375359025613 2266.7323570855465 3097.8494930945853 0.6590235607475006 0.7113921812443854 0.6981452914156252 0.7569489848876232 0.6648521816880423 0.9239632228629214 0.820733692025999 0.784777469798375 0.8915338017740926 0.7317115831928951 1.0 11.59705133813732 -7.637360866377856 0.1806455129297037 1.0737062880549968 0.5307242507974776 0.17485283370603122 0.09685264749176366 1.4868922547277978 0.1395009515610801 0.1250719196943879 0.24844954778520945 2.3048312496731142e-08 7.637360866377856 -0.5429820372575191 VSRSPGAS(ph)R ddPTM_A549_PD325901_60min_R1 1 VSRSPGASR 9 1 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 VS(0.084)RS(0.33)PGAS(0.585)R 55.721000000000004 0.014186 39758000.0 926.98 1053.0 1062.0 784.0 1068.8 951.4 653.83 820.26 1149.4 1011.2 1064.8 True False 1021.0863271933919 1141.7400055038215 1134.0737063247905 832.4258994068124 993.7311751598322 943.6521138356643 678.7118584395046 803.8992708184783 1101.0947151461696 947.3526594275284 933.8363503233339 1.0934317633275341 1.2226339284270766 1.2144244609155832 0.8914044726558257 1.0641384593946897 1.0105112244869583 0.7267995706148145 0.860856691367962 1.1791088607387405 1.0144739590609366 1.0 9.867025937500804 -6.232970092180741 24.80078221711681 1.0276320753832848 1.1814104648682282 0.27823373805684604 0.12537560932772682 897.7631862199744 782077.9311153535 0.02043069114776958 0.0540430459861334 5.848303572750491e-07 6.232970092180741 0.15377838948494338 VSRT(ph)PEPK ddPTM_A549_MK2206_60min_R1 2 VSRTPEPK 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.023)RT(0.977)PEPK;VS(0.002)RT(0.998)PEPK 77.288 0.0017800000000000001 232720000.0 13510.3 13915.2 13233.9 12382.8 18999.4 14193.5 12482.8 14577.4 17672.9 20217.4 21275.1 True False 15790.50834487794 14623.424243375262 15110.666016662923 15416.586555885011 16204.613428352992 15695.44674911721 14750.763180019623 16643.791091415173 13670.01636782211 15650.275298405884 15991.905507111003 0.9874063061375951 0.9144266289513011 0.9448946537324007 0.9640243652659047 1.01330097411765 0.9814619491178229 0.9223893408737632 1.0407634714958953 0.8548084755593113 0.9786373044442259 1.0 13.965054232180776 -8.757567178649728 24.997469992779155 0.9314373393024641 0.9682166872683895 0.03562616084529613 0.04879920471732906 212.41874944300142 1371295.1492737294 0.010240357446631963 0.011397215545063599 1.747562920512957e-09 8.757567178649728 0.03677934796592541 VSRT(ph)PEPK ddPTM_A549_PD325901_60min_R1 2 VSRTPEPK 8 1 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.055)RT(0.945)PEPK;VS(0.041)RT(0.959)PEPK 83.081 0.0013529000000000002 333160000.0 12696.099999999999 12431.9 12513.8 13263.0 14412.4 11861.2 12569.5 12765.3 14429.4 13445.9 12823.7 True False 13984.998725625164 13479.57984275684 13363.061719592439 14082.225387541524 13400.122744080796 11764.606319768327 13047.83920079432 12510.686077315879 13822.982497590167 12596.923579308357 11246.466196131985 1.243501601457269 1.1985613620919338 1.1882009412155097 1.252146686964199 1.191496289624693 1.0460713716291208 1.1601723575430196 1.1124104104468564 1.2290956338217889 1.1200783748090433 1.0 13.457184136352062 -10.895773209616356 0.9293903838061496 0.9897601461233743 1.181044070181324 0.26863853256987213 0.06620307665097093 0.3938721800161275 0.5481401932799963 0.054639750184029105 0.010517932798354274 1.2712377775587134e-11 10.895773209616356 0.1912839240579498 VSS(ph)CEQR ddPTM_A549_MK2206_60min_R1 1 VSSCEQR 7 0 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;D6R9F5;F8WA26 Q8WX93-4 PALLD Palladin 1 VS(0.143)S(0.857)CEQR 68.383 0.022811 2310600.0 835.04 783.45 476.7 465.15 583.22 618.71 372.5 643.27 684.49 958.16 1011.1 True False 975.9743372321026 823.3242586144903 544.3032280841785 579.1117708813769 497.4291105868625 684.1814815335407 440.17842828190066 734.4554924317532 529.4541079059214 741.7109905289789 760.0159650596207 1.284149783821371 1.0832986364304904 0.7161734135959628 0.7619731657031014 0.6544982387940244 0.9002198808808825 0.5791699760509244 0.9663685056591379 0.6966355079980294 0.9759150131415912 1.0 9.569885914213087 -5.563034830473796 3.946988533416879 0.8193121664708197 1.252266385027041 0.552335915698122 0.13555769624713787 0.1227059514886245 3.964997945056508 0.020031816380415787 0.09960950030690434 2.7350493661964454e-06 5.563034830473796 0.4329542185562213 VSS(ph)CEQR ddPTM_A549_PD325901_60min_R1 1 VSSCEQR 7 0 Q8WX93-4;Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;D6R9F5;F8WA26 Q8WX93-4 PALLD Palladin 1 VS(0.118)S(0.882)CEQR 64.265 0.025907 3351100.0 932.2 948.27 713.69 749.43 619.96 642.01 662.79 354.24 589.49 717.56 1055.9 True False 1026.8362577506302 1028.184040853854 762.1252951666107 795.7205890209788 576.416148345892 636.7816834177369 688.0128361426042 347.17440530409624 564.7157853066947 672.2531391404444 926.0309939015851 1.1088573325438373 1.110312773141506 0.8230019299414576 0.8592807306248161 0.62245880768776 0.6876461885307172 0.7429695557422384 0.37490581588567495 0.609823849337283 0.7259510141319188 1.0 9.854916670517055 -5.8319027040145635 2.1571141937515383 0.7544928954029982 1.13429040366794 0.480985588350088 0.15418267455457366 0.30321952293143317 2.691637119913414 0.02820916355130577 0.142358527679488 1.4726423849186497e-06 5.8319027040145635 0.37979750826494174 VSS(ph)GFGLSK ddPTM_A549_MK2206_60min_R1 1 VSSGFGLSK 9 0 Q8IZQ1;Q8IZQ1-2 Q8IZQ1 WDFY3 WD repeat and FYVE domain-containing protein 3 1 VS(0.023)S(0.977)GFGLSK 82.417 0.0015148 2467400.0 2067.9 3020.7 2892.4 2764.6 3227.3 2340.3 2580.7 2612.5 4151.8 3392.0 3631.4 True False 2416.910964699013 3174.4407275471203 3302.5858126928456 3441.9271241076117 2752.56844517846 2587.9489926345886 3049.579784878123 2982.8298754457 3211.423929062226 2625.7448441536876 2729.6231584586144 0.8854375950062696 1.1629593329431192 1.2099054048756592 1.2609532247855146 1.0084060272747695 0.9480975366929304 1.1172164096820545 1.0927625178598164 1.1765081634476162 0.96194408228732 1.0 11.414486076485026 -11.080496821951805 1.4184027673590671 1.000288909637145 1.1093122097844372 0.12668206955711236 0.108323138331937 0.7599326919921466 2.74206259431715 0.07767774269052294 0.017281329430374037 8.308127983404175e-12 11.080496821951805 0.10902330014729222 VSS(ph)LAGFTDCHR ddPTM_A549_PD325901_60min_R1 2 VSSLAGFTDCHR 12 0 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 VS(0.1)S(0.9)LAGFTDCHR;VS(0.111)S(0.889)LAGFTDCHR 127.79 2.812e-08 5380900.0 635.48 531.25 666.46 684.55 766.48 768.8399999999999 681.74 800.35 781.5699999999999 809.79 867.6500000000001 True False 699.9934617843501 576.020301922037 711.6899833495482 726.8330987741506 712.6450890124516 762.5788219480895 707.6839887624425 784.3863913875709 748.723330882888 758.6597212003742 760.9345504865142 0.9199128378870421 0.7569905999849137 0.9352840962399712 0.9551847768108829 0.936539270764893 1.002160857935185 0.9300195244255564 1.030819787176259 0.9839523391389985 0.9970104796993571 1.0 9.571628559733238 -5.958755384822854 5.450193803667132 0.9841324901042912 0.8378596944194944 0.5868169211314352 0.04507752749804537 0.07957981115477085 5.765622957626998 0.005657310568776071 0.01793485993298465 1.0996250258219132e-06 5.958755384822854 -0.14627279568479679 VSS(ph)LLGK ddPTM_A549_PD325901_60min_R1 2 VSSLLGK 7 0 Q9UP95-3;Q9UP95-2;Q9UP95;Q9UP95-5;Q9UP95-6;I3L4N6;Q9UP95-7;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 VS(0.11)S(0.89)LLGK;VS(0.111)S(0.889)LLGK 84.476 0.01404 2247000.0 1956.33 1818.2399999999998 1737.38 1958.9299999999998 2068.4300000000003 2012.14 2081.4 2080.1099999999997 2125.12 1987.29 2063.42 True False 2154.9351814259735 1971.4694659138338 1855.2890545146568 2079.9286570471772 1923.1506124961188 1995.7537989628904 2160.6088159857827 2038.6205742352734 2035.8085967038685 1861.812170246966 1809.6324210970831 1.1908137565967964 1.0894308937715858 1.0252297830682622 1.1493652704267026 1.06272997216209 1.1028503776214242 1.1939489980379117 1.1265384895123436 1.1249845951973312 1.0288344464552912 1.0 10.82148096643722 -10.63411865692774 0.8776974411501289 0.9989715417423303 1.1160581315195701 0.40246976916855404 0.04833038608796152 0.44741783583470995 0.6063661214102996 0.03363779959775883 0.008771376635453538 2.3221022703004424e-11 10.63411865692774 0.11708658977723985 VSS(ph)PAGPTEDNDLSR ddPTM_A549_PD325901_60min_R1 2 VSSPAGPTEDNDLSR 15 0 Q86YC2;H3BN63 Q86YC2 PALB2 Partner and localizer of BRCA2 1 VS(0.121)S(0.879)PAGPTEDNDLSR;VS(0.081)S(0.919)PAGPTEDNDLSR 111.12 2.4099e-06 8351000.0 1006.49 1450.42 1762.5900000000001 1812.69 1987.23 1569.3899999999999 1691.5500000000002 1492.09 1454.9 1425.4299999999998 1687.26 True False 1108.6681238612232 1572.6519836494335 1882.2099567147022 1924.6557443823156 1847.653820371325 1556.6094081695956 1755.922860901677 1462.3290944280395 1393.7556125510368 1335.4281065345945 1479.7377164223788 0.7492328617139628 1.0627910380305081 1.2719889044021915 1.3006735741220634 1.248636025064274 1.0519495386878916 1.186644661019415 0.9882353326531212 0.9418936863492104 0.9024762238022239 1.0 10.53112576541493 -8.323028401534177 6.719791280164378 0.9725553608772728 1.136504733132192 0.2302437660493487 0.14452018333169386 0.28715566288524763 26.183163411070364 0.02394858962461041 0.029030949875969325 4.753041414855997e-09 8.323028401534177 0.16394937225491923 VSS(ph)PLSPLSPGIK ddPTM_A549_MK2206_60min_R1 1 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VS(0.065)S(0.609)PLS(0.26)PLS(0.065)PGIK 103.88 0.00011849 2870400.0 2083.3 2456.3 2179.7 2370.5 3978.2 2857.4 2233.7 2536.9 4214.2 3448.7 3856.7 True False 2434.910108205162 2581.3151782944333 2488.8142359032595 2951.2726064157887 3393.012049889674 3159.768171411388 2639.534376518877 2896.5133439304104 3259.6904286945496 2669.6362747738267 2898.974950494944 0.8399210582310993 0.8904234159918227 0.8585152608781054 1.0180400509883385 1.1704178572879296 1.0899604947852062 0.9105061001193636 0.9991508700121353 1.124428628863461 0.9208897352900679 1.0 11.501327152054893 -6.318670866565342 4.488620880612901 1.0540140556909616 0.8648509865275421 0.46086553738041813 0.07732382309500899 0.12029534115245093 5.070781310725429 0.010570253097481193 0.025914812309585693 4.800971561458624e-07 6.318670866565342 -0.18916306916341952 VSS(ph)PPNAMMSSR ddPTM_A549_MK2206_60min_R1 2 VSSPPNAMMSSR 12 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.111)S(0.883)PPNAMMS(0.003)S(0.004)R;VS(0.184)S(0.806)PPNAMMS(0.009)S(0.001)R 45.004 0.015290999999999999 23317000.0 2963.56 3364.4 2867.7 3145.5 3300.3999999999996 2704.6000000000004 2509.69 2483.14 3297.3 3698.3 3885.8 True False 3463.7364759144093 3535.6335894857234 3274.3829812817276 3916.1476412068587 2814.915532013443 2990.7989768318184 2965.668187046451 2835.1326992973154 2550.466814706122 2862.851461419099 2920.8486173758033 1.1858664825383372 1.210481627994218 1.1210382358752822 1.3407567985242823 0.9637320863764811 1.0239486425417217 1.015344708179678 0.9706537622084987 0.8731937696235536 0.980143730965143 1.0 11.512171872332523 -6.7845898260968545 23.86915348999456 0.9547782416710087 1.2075677286500244 0.7648269450574581 0.06312729426048513 50.329667726175934 51892.06283840724 0.010225520691923224 0.019335217562594983 1.6421399770711727e-07 6.7845898260968545 0.2527894869790157 VSS(ph)PPNAMMSSR ddPTM_A549_PD325901_60min_R1 1 VSSPPNAMMSSR 12 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.053)S(0.946)PPNAMMSSR 56.91 0.0043442 32420000.0 4702.4 4345.1 4377.5 4629.7 5350.6 4848.5 4764.3 4929.5 5047.0 5396.1 5627.1 True False 5179.784186276086 4711.276826129779 4674.583474045923 4915.666054188421 4974.792314567927 4809.015423515054 4945.608043624996 4831.177255382061 4834.892141415272 5055.389325095814 4935.002373125879 1.0496011540912715 0.9546655644555668 0.947230238328132 0.9960818014915745 1.0080628008729497 0.974470741838565 1.0021490710028573 0.9789614857514133 0.9797142485167244 1.0243945074120968 1.0 12.268835063101838 VSS(ph)PSPELGTTPASIFR ddPTM_A549_MK2206_60min_R1 3 VSSPSPELGTTPASIFR 17 0 A0A5E8;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 VS(0.025)S(0.965)PS(0.011)PELGTTPASIFR;VS(0.014)S(0.971)PS(0.014)PELGTTPASIFR;VS(0.005)S(0.893)PS(0.102)PELGTTPASIFR 123.29 5.1209e-10 8831500.0 2842.49 3124.37 2754.5 2434.9700000000003 3967.5 3003.8 2569.97 2809.2200000000003 4272.5 4190.1 3767.5699999999997 True False 3322.232819791723 3283.3870877367476 3145.129519106085 3031.5377593099593 3383.886005715469 3321.660122238935 3036.900282769495 3207.435537875433 3304.78557178052 3243.553499849167 2831.9783893578046 1.1731137611346998 1.1593969431671076 1.1105768076921279 1.0704664169409173 1.1948841200313036 1.1729115358794011 1.072359977809774 1.1325776884204153 1.1669529627060227 1.1453313033877683 1.0 11.467594541013336 -10.821868581412815 0.891110039500813 0.9932492609864116 1.1393744504710828 0.0 0.05754001864329693 0.3456923744668468 0.449308760363302 0.034959627234745515 0.007195211624831105 1.5070630382066984e-11 10.821868581412815 0.14612518948467113 VSS(ph)PTKPK ddPTM_A549_MK2206_60min_R1 4 VSSPTKPK 8 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 VS(0.082)S(0.894)PT(0.024)KPK;VS(0.047)S(0.95)PT(0.003)KPK;VS(0.005)S(0.994)PT(0.001)KPK;VS(0.022)S(0.964)PT(0.014)KPK 135.43 0.000671 562693000.0 43026.3 44184.2 42695.0 34694.0 53507.4 43485.100000000006 41601.9 42582.299999999996 57982.8 61542.3 60174.6 True False 50288.08754796134 46432.98705402303 48749.792999903555 43194.03155747283 45636.532340824146 48086.6644189268 49160.42672628406 48618.47142782447 44849.78837950512 47639.8516870164 45231.586085527284 1.111791380759296 1.026561106352186 1.0777820814800476 0.9549528392791335 1.0089527317156457 1.0631213402068393 1.0868605543331562 1.0748787658229144 0.9915590466958148 1.0532430058264017 1.0 15.465042965781976 -8.777841259675972 24.867119380937606 0.9960139872460007 1.0477644351319113 0.07118198418370891 0.04408757470481182 232.4620381465075 352437.4292067688 0.007131514991822901 0.007602810542296462 1.6678567246400065e-09 8.777841259675972 0.051750447885910655 VSS(ph)PTKPK ddPTM_A549_PD325901_60min_R1 3 VSSPTKPK 8 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 VS(0.037)S(0.961)PT(0.002)KPK;VS(0.074)S(0.809)PT(0.117)KPK;VS(0.121)S(0.877)PT(0.002)KPK 137.85 0.00088581 1300374000.0 74225.4 73679.3 76328.4 75754.9 86392.9 78434.8 74818.8 80473.1 82905.8 89962.2 97106.7 True False 81760.70796614833 79888.51318852583 81508.50422395607 80434.10812113927 80324.96074332511 77796.05299377498 77666.07037641834 78868.00089057452 79421.55753868565 84281.97133895486 85163.19151008908 0.9600474866710735 0.9380638721020881 0.9570860694470329 0.9444703362439211 0.9431887100404076 0.9134938652992904 0.9119675883355949 0.9260808512704837 0.932580803166316 0.9896525699012839 1.0 16.377942395679515 -10.59360409443195 0.8677839326672289 1.0002337361294575 0.9358715847310551 0.690895134781387 0.014990103463174084 0.2763288644874014 0.36978188993005234 0.011204545724531624 0.003036518081605197 2.549153017547168e-11 10.59360409443195 -0.0643621513984024 VSS(ph)PTVNTTLR ddPTM_A549_MK2206_60min_R1 1 VSSPTVNTTLR 11 0 Q9NSK0;Q9NSK0-3;Q9NSK0-5 Q9NSK0 KLC4 Kinesin light chain 4 1 VS(0.022)S(0.863)PT(0.098)VNT(0.016)T(0.001)LR 88.338 0.00030503 7023700.0 1808.2 1820.5 1380.4 1231.3 2087.6 1946.2 1427.8 1987.7 2360.3 2322.4 2172.0 True False 2113.379953754417 1913.1556740158023 1576.1614769192379 1532.9685552751573 1780.5168054269973 2152.1455922169957 1687.212778257444 2269.4625620759493 1825.6958186245906 1797.76822702315 1632.632455849566 1.2944615588048483 1.17182263966464 0.9654110888657162 0.9389550904630601 1.0905803073114073 1.3182058120344624 1.033430869398879 1.3900633629722856 1.1182528021437386 1.1011469363982802 1.0 10.672984327365107 -10.140051771287046 1.1165084695647225 1.0142434133468017 1.1398499973380956 0.05153432071398145 0.13903246883931283 0.7148915152768741 1.7815141324621535 0.0500804881934246 0.025533007945083668 7.24349606809535e-11 10.140051771287046 0.12560658399129387 VSS(ph)PTVNTTLR ddPTM_A549_PD325901_60min_R1 2 VSSPTVNTTLR 11 0 Q9NSK0;Q9NSK0-3;Q9NSK0-5 Q9NSK0 KLC4 Kinesin light chain 4 1 VS(0.001)S(0.998)PT(0.001)VNTTLR;VS(0.007)S(0.993)PT(0.001)VNTTLR 198.74 6.003400000000001e-24 40649000.0 10316.099999999999 10710.0 10223.7 9470.099999999999 10944.2 11170.8 10214.2 10256.4 13008.4 11170.3 12607.5 True False 11363.38287768856 11612.56928674827 10917.541762102417 10055.046568842421 10175.517147440334 11079.828708466941 10602.906970424712 10051.828056009856 12461.70218592955 10465.005351664677 11056.857425527262 1.0277226557569257 1.0502594760730135 0.9874000669391646 0.9093946120376001 0.9202901652641234 1.0020775598396199 0.9589439894508812 0.9091035245514636 1.1270564235692218 0.9464719448677922 1.0 13.43265378132096 -8.759347997294254 24.999957616566363 1.0599988649374403 0.9707980708026391 0.05717351439551732 0.0618368028956331 51.6580976369114 617509.1902661335 0.010900745379545945 0.012064972538008673 1.7404117341035657e-09 8.759347997294254 -0.0892007941348012 VSS(ph)PVFGATSSIK ddPTM_A549_MK2206_60min_R1 4 VSSPVFGATSSIK 13 0 F6Q6H0;I6L8A6;Q99708-3;Q99708;Q99708-2 F6Q6H0 RBBP8 DNA endonuclease RBBP8 1 VS(0.013)S(0.987)PVFGATSSIK;VS(0.014)S(0.986)PVFGATSSIK;VS(0.027)S(0.973)PVFGATSSIK;VS(0.108)S(0.892)PVFGATSSIK 161.21 1.2760999999999999e-18 30489400.0 11467.0 14352.8 14250.3 12839.0 16904.6 13688.8 13526.599999999999 13172.0 20077.6 18466.8 17457.5 True False 13402.34925876666 15083.296214234555 16271.20682015518 15984.555576364603 14417.955733388208 15137.339730109958 15984.20812885357 15039.171337558193 15530.055657338926 14295.137054250396 13122.320947510952 1.0213398462342003 1.149438142426745 1.2399640951657647 1.218119541527946 1.0987351849615454 1.1535565842855882 1.2180930639320677 1.1460755606965116 1.1834839065024296 1.089375660862944 1.0 13.679735291832348 -10.73221396371535 0.8443863683715869 0.9933109280099252 1.1632330085144025 0.28810666249281913 0.06349585432840368 0.4369127581374839 0.5180848851150994 0.04859438143564239 0.010735706276649168 1.852618669528301e-11 10.73221396371535 0.16992208050447732 VSS(ph)PVFGATSSIK ddPTM_A549_PD325901_60min_R1 2 VSSPVFGATSSIK 13 0 F6Q6H0;I6L8A6;Q99708-3;Q99708;Q99708-2 F6Q6H0 RBBP8 DNA endonuclease RBBP8 1 VSS(1)PVFGATSSIK;VS(0.007)S(0.993)PVFGATSSIK 237.65 1.8093999999999997e-56 62969000.0 15875.699999999999 15415.7 16300.1 17058.9 20068.9 17180.0 18511.1 17806.4 17630.9 17477.2 19479.8 True False 17487.389376927353 16714.835140403862 17406.32280646397 18112.589509427136 18659.32969794643 17040.091776010853 19215.5500401626 17451.237383149437 16889.9345861063 16373.686609322383 17083.908092626294 1.023617622040194 0.9783964564652669 1.0188724214675935 1.060213471719907 1.092216698707254 0.9974352287323325 1.124774842850879 1.0215014789667294 0.988645835281465 0.9584274581990725 1.0 14.060350421305866 -8.530408408936006 14.218888218637522 0.9951852813457462 1.042141410064432 0.2808020227769801 0.04048135592918962 1.0791417346783112 2031.8381855221003 0.006515240605719673 0.007430499725509969 2.9484352248817594e-09 8.530408408936006 0.04695612871868571 VSS(ph)QAEDTSSSFDNLFIDR ddPTM_A549_MK2206_60min_R1 2 VSSQAEDTSSSFDNLFIDR 19 0 H8Y6P7;P0CAP2;P0CAP2-3;Q9BZD3 H8Y6P7 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 1 VS(0.108)S(0.892)QAEDTSSSFDNLFIDR;VS(0.127)S(0.872)QAEDTSSSFDNLFIDR 137.44 5.2059e-17 12612000.0 2066.93 2899.0 2120.8 2216.02 3445.1000000000004 2367.05 2428.42 2303.94 3161.6000000000004 2859.5 2915.6 True False 2415.777252413236 3046.546717369849 2421.5613302306006 2758.944999480919 2938.330353696374 2617.5296598793766 2869.632480022371 2630.530550520331 2445.5026480377524 2213.5369639909986 2191.576053533606 1.1023013545517335 1.3901168122629028 1.1049405866276811 1.2588862681870023 1.3407384831380744 1.1943594910425221 1.3093921497250782 1.2002917016176433 1.115864833481241 1.0100206015766526 1.0 11.097753029758708 -9.136830134015275 0.9278536709212031 1.026542389825125 1.2482218625821928 0.5193572197205016 0.08629962477241279 0.2490616341293034 0.4503562510134808 0.02073441907362577 0.01782921293025411 7.297428794202749e-10 9.136830134015275 0.2216794727570679 VSS(ph)QAEDTSSSFDNLFIDR ddPTM_A549_PD325901_60min_R1 2 VSSQAEDTSSSFDNLFIDR 19 0 H8Y6P7;P0CAP2;P0CAP2-3;Q9BZD3 H8Y6P7 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 1 VS(0.23)S(0.711)QAEDT(0.015)S(0.015)S(0.015)S(0.015)FDNLFIDR;VS(0.019)S(0.981)QAEDTSSSFDNLFIDR 143.39 1.3276999999999998e-20 11828100.0 1859.4299999999998 1605.0500000000002 1433.63 1946.3600000000001 1878.48 1557.52 1996.92 2816.6 2358.35 2808.9 2827.5 True False 2048.197964759982 1740.3131964234653 1530.9247529175243 2066.5822366957204 1746.5420452041935 1544.8360735141111 2072.913883356554 2760.420703420045 2259.2367508830425 2631.545574630126 2479.7354249992745 0.8259743939257476 0.7018140640645057 0.6173742317360217 0.833388197733363 0.7043259646156422 0.6229842336968522 0.8359415534651888 1.1131916234252501 0.9110797579881746 1.061220301206487 1.0 11.275970485353458 -8.005591452005858 8.585153770963016 0.9688313436630588 0.7178683855327949 0.7288423298166172 0.0843496862061036 0.053026984222562405 40.41431242897007 0.01243427841081533 0.016698701265442057 9.872077315774456e-09 8.005591452005858 -0.2509629581302639 VSS(ph)SPQK ddPTM_A549_MK2206_60min_R1 1 VSSSPQK 7 0 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 VS(0.005)S(0.498)S(0.498)PQK 105.94 0.009670100000000001 16348000.0 12927.0 12175.0 9854.4 8487.5 9900.3 8815.0 8183.3 9865.6 9857.3 15880.0 16625.0 True False 15108.761565193758 12794.655496370438 11251.902099502262 10566.93788101835 8443.978984848105 9747.797449076565 9670.099683649069 11264.079012132865 7624.637288873519 12292.696970861023 12496.553673342089 1.2090342633764768 1.0238547227356185 0.9004004138761118 0.8455881643240539 0.6757046146939679 0.7800388574228087 0.7738213219759563 0.9013748355405887 0.610139202229696 0.9836869661980537 1.0 13.609242659724021 -5.5094627202772095 1.3617160870743061 0.8043177527498137 1.278219399902262 0.528114148870598 0.11191053331762331 0.5961535560400648 1.3245818462300296 0.020451219971891522 0.34044092941235554 3.094120902567668e-06 5.5094627202772095 0.4739016471524483 VSS(ph)TPPVR ddPTM_A549_PD325901_60min_R1 1 VSSTPPVR 8 0 Q9H6A9;Q9H6A9-2 Q9H6A9 PCNXL3 Pecanex-like protein 3 1 VS(0.049)S(0.497)T(0.454)PPVR 86.13600000000001 0.002848 9327900.0 2958.3 2795.0 2587.6 2710.5 2534.1 2687.2 2331.3 2702.1 3072.1 3386.1 2805.7 True False 3258.624438214646 3030.5444590533525 2763.2100965028526 2877.9214290078644 2356.113558170405 2665.31633413832 2420.0188972363107 2648.204495743558 2942.990320515526 3172.3010681245587 2460.616686797689 1.3243120944837228 1.2316198924089157 1.122974623121396 1.1695935593907016 0.9575297000999831 1.0831903841175006 0.9835009695824614 1.0762360955903296 1.1960376991288353 1.289230088191052 1.0 11.264804217904262 -5.552666514706564 1.2455204266685398 1.078437899203332 1.3703135683466 0.3768615226709724 0.09297773457498074 0.6234267164371875 1.1495169484701417 0.012500502629981777 0.20247434365355876 2.8011314219577394e-06 5.552666514706564 0.2918756691432678 VSSDNVADLHEK ddPTM_A549_PD325901_60min_R1 1 VSSDNVADLHEK 12 0 P28074;P28074-3 P28074 PSMB5 Proteasome subunit beta type-5 0 62.162 0.008319400000000001 2640400.0 1849.9 2264.1 1553.8 1736.0 2247.4 2276.6 1946.2 1846.0 1988.6 2203.1 2494.5 False True 2037.7004861755963 2454.9036528596403 1659.2502117584363 1843.2287772579418 2089.5503771090994 2258.060124404323 2020.2637060015036 1809.1800818410147 1905.0260575427812 2063.9958900166025 2187.692313938351 0.9314383349033508 1.1221430167390618 0.7584477036313223 0.8425447973255913 0.9551390585394646 1.0321653141155362 0.9234679361123515 0.8269810477068748 0.8707924992035533 0.9434580342337692 1.0 11.0951941304847 -11.005538959095029 1.3337807645412536 0.9992705353899551 0.9139534457706605 0.032610135857829126 0.09575617376697591 0.8686400943315798 2.7892324742801433 0.06520769962134867 0.01538825096876364 9.873270619892282e-12 11.005538959095029 -0.08531708961929463 VSSDS(ph)PKDQSPPEDSGESEADLECSFAAIHSPAPPPDPAPR ddPTM_A549_PD325901_60min_R1 2 VSSDSPKDQSPPEDSGESEADLECSFAAIHSPAPPPDPAPR 41 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 VS(0.178)S(0.165)DS(0.63)PKDQS(0.026)PPEDSGESEADLECSFAAIHSPAPPPDPAPR;VS(0.177)S(0.168)DS(0.634)PKDQS(0.017)PPEDS(0.001)GES(0.001)EADLECS(0.001)FAAIHSPAPPPDPAPR 54.163999999999994 0.0012534 14273100.0 1471.6399999999999 1698.4 1526.98 1613.37 2000.69 1774.6799999999998 1317.8600000000001 2125.95 1615.1100000000001 1656.94 1987.19 True False 1621.0398094358911 1841.5301285353196 1630.6100452766757 1713.024200670879 1860.1684364058046 1760.2275944732792 1368.0118834606633 2083.5462594744895 1547.2325433963197 1552.3205256248511 1742.778227835298 0.9301469249184862 1.0566634923037117 0.9356382924877675 0.9829272441615384 1.067358087618708 1.0100123850294223 0.7849603934746584 1.1955314945966815 0.8877965759981605 0.8907160422545478 1.0 10.767173279852313 VSSPLS(ph)PLSPGIK ddPTM_A549_MK2206_60min_R1 1 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSS(0.012)PLS(0.809)PLS(0.179)PGIK 121.28 9.2296e-06 2486200.0 2191.4 2602.3 2338.8 2228.2 3712.6 2594.5 2129.7 2636.8 3296.0 3399.5 3720.4 True False 2561.254745413907 2734.7459546780105 2670.477008272031 2774.1091000276983 3166.4814580514803 2869.048267910285 2516.6389227166815 3010.5744748613315 2549.4612626304493 2631.550588944711 2796.5220021835744 0.9158714801507135 0.9779096865830743 0.954927944849665 0.9919854368610811 1.132292703429129 1.0259344520336622 0.8999174405749873 1.0765423881916971 0.9116542836565507 0.9410083621333747 1.0 11.449417965715515 VSSPLS(ph)PLSPGIK ddPTM_A549_PD325901_60min_R1 3 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VS(0.021)S(0.152)PLS(0.621)PLS(0.205)PGIK;VS(0.001)S(0.007)PLS(0.992)PLSPGIK;VS(0.02)S(0.159)PLS(0.808)PLS(0.013)PGIK 112.44 3.3459e-05 4678400.0 6899.200000000001 5784.6 5885.900000000001 6380.2 7739.8 7310.6 7245.1 7703.8 8174.2 8436.3 8565.400000000001 True False 7599.6017050774035 6272.08854305547 6285.352568791985 6774.290463514473 7196.183148860467 7251.064897421706 7520.81624517084 7550.141665485818 7830.666800546211 7903.630578252034 7511.910100544217 1.0116736759837999 0.8349525565543009 0.8367182893118793 0.901806647422963 0.9579698176019337 0.9652757821071881 1.0011856031964463 1.0050894598617242 1.0424335083534746 1.0521465875476117 1.0 12.874964082175191 -7.222084264754195 1.2369516377792984 1.01869134429099 0.8870964719200588 0.5764202599416642 0.046980774781579526 0.2216663573634062 0.6660998463240787 0.0073262999985875535 0.015594453434015429 5.996747120214364e-08 7.222084264754195 -0.13159487237093115 VSSPLS(ph)PLSPGIKS(ph)PTIPR ddPTM_A549_MK2206_60min_R1 1 VSSPLSPLSPGIKSPTIPR 19 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 2 VS(0.095)S(0.096)PLS(0.786)PLS(0.052)PGIKS(0.86)PT(0.111)IPR 40.937 0.026930000000000003 914590.0 528.87 419.5 568.63 475.16 708.47 539.94 548.08 386.64 725.0 734.89 627.43 True False 618.1303263699252 440.8507581706284 649.270284425229 591.5742213307431 604.2550015045341 597.0760924168351 647.6590415375678 441.4474040353398 560.7886575870979 568.8778385967287 471.621814812934 1.3106482926687837 0.934754806338823 1.376675683847996 1.2543402420123153 1.281227845120371 1.2660060956969552 1.3732592963166004 0.9360199002042289 1.1890642883207838 1.206216126415549 1.0 8.881486641329374 -10.246068088567288 0.4065780596437033 0.9665797570803443 1.2364666945081928 0.049022271159190334 0.1519627532565609 1.7647766937533635 0.48052452957531877 0.1975171642449017 0.04553471024473584 5.674556328989255e-11 10.246068088567288 0.26988693742784853 VSSPLSPLS(ph)PGIK ddPTM_A549_MK2206_60min_R1 2 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLS(0.001)PLS(0.999)PGIK;VSSPLS(0.021)PLS(0.979)PGIK 125.61 2.42e-06 6980800.0 4200.4 4487.7 4446.0 4569.5 6075.299999999999 4427.3 3925.5 4019.3999999999996 5298.6 5840.700000000001 6555.4 True False 4909.324830079663 4716.104761483501 5076.509654000963 5689.027705132648 5181.6314179012425 4895.793947396106 4638.712537504971 4589.162258896248 4098.475560125517 4521.281813457679 4927.513260164017 0.9963088013925002 0.9570963105488468 1.030237644420258 1.1545433578281803 1.0515712783142803 0.9935628153404796 0.9413901683443804 0.931334329629687 0.8317533294652353 0.9175585279515177 1.0 12.266644038294547 -7.6747218618013875 2.416574672540867 0.9198169137502256 1.0387521804357835 0.4699350005287528 0.057730386514305745 0.25406612652246696 3.0310417774829452 0.01211876665256499 0.018644438438442244 2.11484302966815e-08 7.6747218618013875 0.11893526668555798 VSSPLSPLS(ph)PGIK ddPTM_A549_PD325901_60min_R1 2 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLSPLS(1)PGIK;VSS(0.001)PLS(0.024)PLS(0.975)PGIK 119.25 1.2415e-05 5303300.0 9748.1 9469.0 9661.8 8954.7 11855.9 10481.1 10131.400000000001 11950.900000000001 12169.9 12812.2 13673.599999999999 True False 10737.719935828072 10266.985861458386 10317.507849123229 9507.811481400746 11023.182484634593 10395.745396597633 10516.95597111481 11712.52992420032 11658.441424967263 12003.235505456269 11991.833884091973 0.8954193361594532 0.8561647835264194 0.8603778161745671 0.7928571704127372 0.9192240812522957 0.8669020516026605 0.8770098112404897 0.976708820136162 0.9721983757991361 1.0009507821301145 1.0 13.549764683270023 -8.253765618111187 3.1059016010167078 0.9866833547496413 0.8637637078980824 0.7915118077249903 0.029850208055362794 0.08358616135144945 1.654622686587362 0.004885921655475383 0.006215333061062945 5.574865344584956e-09 8.253765618111187 -0.12291964685155887 VSSPLSPLSPGIKS(ph)PTIPR ddPTM_A549_MK2206_60min_R1 3 VSSPLSPLSPGIKSPTIPR 19 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLSPLS(0.003)PGIKS(0.834)PT(0.163)IPR;VSSPLS(0.002)PLS(0.137)PGIKS(0.829)PT(0.031)IPR;VSSPLSPLSPGIKS(0.916)PT(0.084)IPR 241.76 9.363099999999998e-86 115058000.0 6060.700000000001 7267.6 6108.9 6865.700000000001 9703.3 6761.5 7533.400000000001 7804.1 11146.6 10461.3 11389.9 True False 7083.597990111377 7637.489797570577 6975.23387884086 8547.796808212985 8275.957423883783 7476.9974420795525 8902.121266090926 8910.355074053894 8621.912897462546 8098.085064311613 8561.473484751827 0.8273807076232171 0.8920765579865563 0.8147235275871502 0.9984025323954807 0.9666510605473984 0.8733306778787845 1.0397884525304903 1.0407501804360468 1.0070594638666304 0.9458751555715825 1.0 13.063643399770143 -6.302782300248084 0.6304309118278445 1.0068862420727538 0.8110175234682047 0.5378370089939892 0.053089458441971174 0.6497740589917282 0.3461021644142656 0.008763165955050818 0.07187335192357017 4.979866492888924e-07 6.302782300248084 -0.19586871860454913 VSSPLSPLSPGIKS(ph)PTIPR ddPTM_A549_PD325901_60min_R1 2 VSSPLSPLSPGIKSPTIPR 19 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLSPLSPGIKS(0.733)PT(0.267)IPR;VSSPLSPLS(0.003)PGIKS(0.973)PT(0.023)IPR 249.34 1.5346999999999997e-97 160120000.0 5207.8 4627.6 5710.2 5400.4 6677.4 6689.7 5873.9 6386.2 4968.6 5770.8 5770.9 True False 5736.492022220272 5017.58409256361 6097.728510222052 5733.970442801724 6208.402459779438 6635.22130116297 6097.43447882141 6258.82223112302 4759.787020771932 5406.43070314911 5061.115884749179 1.1334441164459848 0.9913987758476852 1.2048189863813494 1.1329458904665826 1.2266864859758326 1.3110194376613848 1.2047608902208706 1.2366486706978845 0.9404619710674377 1.0682289886782634 1.0 12.305239792883233 -8.765691827882433 24.999544854997282 0.9718848083580203 1.179893345733294 0.4676814806663756 0.0824601251028742 56.20329704950261 330410.3903532937 0.014341112363693832 0.015531952780660654 1.7151739504095671e-09 8.765691827882433 0.2080085373752738 VSSPLSPLSPGIKSPT(ph)IPR ddPTM_A549_PD325901_60min_R1 1 VSSPLSPLSPGIKSPTIPR 19 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLSPLSPGIKS(0.16)PT(0.84)IPR 196.18 7.889799999999999e-55 112640000.0 4725.6 4312.4 5352.3 4781.5 6542.7 5751.6 5748.1 5584.6 5680.2 5270.2 5967.0 True False 5205.339433197146 4675.821082369117 5715.5392639945185 5076.842395425607 6083.163323089664 5704.7608765369005 5966.847090981009 5473.210771966053 5441.480947427591 4937.438672582042 5233.096827929501 0.9946957995150765 0.893509376209866 1.09219061904037 0.9701411157405018 1.1624404292737873 1.0901309614777404 1.1402133931738885 1.0458837189396233 1.0398204211292108 0.9435022578276203 1.0 12.353449238031175 -5.762210356347667 24.99999898218182 1.043809631885017 0.9441025878008071 0.2716243918506801 0.06768968189945443 19.035238475178144 617362.6839380955 0.008757234731431404 0.02980404768242322 1.7289787023801883e-06 5.762210356347667 -0.09970704408420983 VSSQFDPNKQT(ph)PSGK ddPTM_A549_PD325901_60min_R1 2 VSSQFDPNKQTPSGK 15 1 Q01780-2;Q01780 Q01780-2 EXOSC10 Exosome component 10 1 VS(0.002)S(0.001)QFDPNKQT(0.997)PSGK;VS(0.002)S(0.002)QFDPNKQT(0.951)PS(0.045)GK 84.493 6.6793e-05 15518200.0 5646.7 4868.3 4989.700000000001 5470.799999999999 6759.1 5446.7 5367.9 5619.9 6205.3 4917.9 5346.4 True False 6219.948827119163 5278.568726300337 5328.331047503586 5808.718890911724 6284.364133629133 5402.343881047629 5572.178371927592 5507.8066857737385 5944.512820512027 4607.382954705938 4688.82669362197 1.3265469665534706 1.125776035501711 1.136388993594391 1.2388427362463834 1.340285010358244 1.152173930505094 1.188395036973154 1.1746662962113306 1.2678039110718506 0.982630251822526 1.0 12.195011240438074 -10.849894021120372 0.9506073773340473 0.9919226384100993 1.2158225248046903 0.6086123476169634 0.06936117310203588 0.356219307282323 0.5365504107361417 0.057416522642147166 0.012120600312289708 1.412882281706305e-11 10.849894021120372 0.22389988639459102 VSSQFDPNKQT(ph)PSGKK ddPTM_A549_MK2206_60min_R1 2 VSSQFDPNKQTPSGKK 16 2 Q01780-2;Q01780 Q01780-2 EXOSC10 Exosome component 10 1 VS(0.001)S(0.001)QFDPNKQT(0.962)PS(0.036)GKK;VSSQFDPNKQT(0.983)PS(0.016)GKK 55.763000000000005 0.0040203 14972700.0 4715.4 4124.7 5026.6 4200.6 6117.5 5408.7 4311.200000000001 3796.4 7007.9 6946.1 7221.5 True False 5511.244239538534 4334.62961198186 5739.447464417735 5229.747188572103 5217.6238538032485 5981.045043995509 5094.489234923305 4334.5513259873915 5420.6218393167255 5376.971185724036 5428.202246739246 1.0152982495906766 0.7985387085725661 1.0573385447945416 0.9634400029427135 0.9612066051771573 1.101846388938135 0.938522369534701 0.7985242864875166 0.9986035141879479 0.990562057438817 1.0 12.40625875909093 -8.304169565866696 0.0069309281238293515 1.9474541681771418 8.884317337519735e-07 0.0 0.09011974334333431 6177.726484815016 31.148213685501258 4353.114044741914 4396.443625374385 4.963984698714784e-09 8.304169565866696 -1.947453279745408 VSSQFDPNKQT(ph)PSGKK ddPTM_A549_PD325901_60min_R1 2 VSSQFDPNKQTPSGKK 16 2 Q01780-2;Q01780 Q01780-2 EXOSC10 Exosome component 10 1 VSSQFDPNKQT(0.972)PS(0.028)GKK;VSSQFDPNKQT(0.801)PS(0.199)GKK 80.238 0.00010229999999999999 27087000.0 6451.5 6338.700000000001 6734.299999999999 6006.2 7724.0 7326.3 7240.3 7564.5 8344.3 7127.2 7151.0 True False 7106.451530656719 6872.884494669588 7191.330094635632 6377.189332930101 7181.492886353429 7266.6370418270235 7515.833578544182 7413.620113264549 7993.618089084896 6677.187375664437 6271.47233392389 1.133139261767325 1.0958964862991607 1.1466733347026044 1.0168568070426403 1.1451047702956483 1.1586811923764775 1.1984161259692154 1.1821179650530402 1.2745999126625354 1.0646921520399504 1.0 12.614588464450721 -6.91245907806549 24.99971084215451 1.144914499115285 1.098889119977781 0.09067591202874792 0.07316549338688044 66.22035280875508 18898.31786397121 0.014982372461722503 0.028314018207190778 1.2233223826834152e-07 6.91245907806549 -0.04602537913750404 VSSQS(ph)FSEIER ddPTM_A549_MK2206_60min_R1 2 VSSQSFSEIER 11 0 A0A0D9SF70;G5E9L0;Q8N6H7-2;Q8N6H7;E9PQP3;E9PIY6 A0A0D9SF70 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 VSS(0.001)QS(0.978)FS(0.021)EIER;VS(0.001)S(0.036)QS(0.919)FS(0.044)EIER 102.33 0.00023247 5925000.0 2836.3 3458.3999999999996 2508.3 2990.3 4332.299999999999 2946.6 2991.3 3053.7 4393.7 4511.0 4547.6 True False 3314.9980991226935 3634.4177879792614 2864.014657024431 3722.923634239668 3695.024408963107 3258.4072562052197 3534.7804899856383 3486.571326564032 3398.5339652971493 3491.9619669744366 3418.305412624993 0.9697782084887003 1.063222079149537 0.8378463335799741 1.0891138107465803 1.0809520984626166 0.9532229753873911 1.0340739235676433 1.0199706888936575 0.9942160091211215 1.0215476809290955 1.0 11.739065586765424 VSSS(ph)PGVK ddPTM_A549_MK2206_60min_R1 2 VSSSPGVK 8 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 VSS(0.074)S(0.926)PGVK;VS(0.003)S(0.081)S(0.916)PGVK 143.39 0.00096362 68693000.0 17980.699999999997 20409.8 18438.9 15807.900000000001 24652.0 18764.7 18544.3 19126.800000000003 26071.0 26530.0 26639.0 True False 21015.402574091368 21448.571642695802 21053.813283661362 19680.836209643592 21025.72345630694 20750.368099000236 21913.559268692752 21838.08247336836 20165.960126832037 20536.85457411478 20023.801101002104 1.0495211407708018 1.0711538500860556 1.0514393934230455 0.9828721385301141 1.0500365714906494 1.0362851685518275 1.0943755962296327 1.090606242202209 1.007099502492702 1.0256221818487299 1.0 14.289428245283665 -8.888175255377961 9.493431410083376 1.0031300272467776 1.0521434563668324 0.2890154805960379 0.02892486718790617 0.22548793580149004 18.0997678015807 0.00511595197012692 0.005439780992862126 1.293673686477986e-09 8.888175255377961 0.0490134291200548 VSSS(ph)PQKEGR ddPTM_A549_MK2206_60min_R1 4 VSSSPQKEGR 10 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 VS(0.003)S(0.021)S(0.976)PQKEGR;VS(0.003)S(0.144)S(0.853)PQKEGR;VS(0.017)S(0.062)S(0.922)PQKEGR;VS(0.03)S(0.17)S(0.799)PQKEGR 115.57 2.4341e-05 273410200.0 12140.0 13581.199999999999 13064.9 11056.6 14122.100000000002 10272.699999999999 10338.900000000001 9887.0 17719.4 18684.1 19173.100000000002 True False 14188.935205496418 14272.42507000462 14917.699275428962 13765.467496349633 12044.757797432756 11359.750295533619 12217.344301110716 11288.512527667615 13705.984192067343 14463.348833328988 14411.890119359727 0.9845297936622616 0.9903229175215705 1.0350966564329944 0.9551465756638163 0.8357514314692724 0.7882207123043411 0.847726717309547 0.7832777265282902 0.9510191986307105 1.0035705735710638 1.0 13.814971936922271 -6.51371952773518 24.11069153441478 0.9276555316100555 1.000867871303819 0.2072381252566794 0.07874839890347313 496.7795919051899 1307716.0326410679 0.013662103982457308 0.029729691537636736 3.06394152280889e-07 6.51371952773518 0.0732123396937635 VSSS(ph)PQKEGR ddPTM_A549_PD325901_60min_R1 4 VSSSPQKEGR 10 1 Q7Z5J4;A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2 Q7Z5J4 RAI1 Retinoic acid-induced protein 1 1 VSS(0.009)S(0.991)PQKEGR;VSS(0.063)S(0.937)PQKEGR;VSS(0.006)S(0.994)PQKEGR;VSS(0.113)S(0.887)PQKEGR 140.62 4.4134000000000003e-08 664667000.0 20671.699999999997 19403.9 19845.7 21829.800000000003 22696.100000000002 24533.3 24903.7 27117.4 23897.9 24181.3 25435.4 True False 22770.275766298753 21039.134750992966 21192.54854388881 23178.177166927093 21102.00423329441 24333.508938789695 25851.423931327532 26576.52218381123 22893.554370185877 22654.488591193538 22307.007048285257 1.020767856351626 0.9431625993326723 0.9500399806220479 1.039053653264919 0.9459809730466071 1.090845978849512 1.158892534322068 1.1913979372617884 1.0262943083592968 1.015577237329783 1.0 14.445209338391344 -7.254516460672212 24.692919381731233 1.044729112020574 0.9794039689716655 0.29206080464965123 0.06634894051960352 735.5455004415401 2623564.3679037984 0.011491529805679924 0.019618367712349337 5.565235404484873e-08 7.254516460672212 -0.06532514304890846 VSSVT(ph)KRTPR ddPTM_A549_PD325901_60min_R1 1 VSSVTKRTPR 10 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 VS(0.004)S(0.004)VT(0.551)KRT(0.441)PR 41.54 0.030264999999999997 6629500.0 1404.2 1624.1 1544.9 1487.5 1891.1 1733.6 1872.2 1589.1 1704.9 1716.4 1990.4 True False 1546.753350282595 1760.9686067794455 1649.7462042383897 1579.3794966423902 1758.2756599408285 1719.482136373247 1943.4475955071505 1557.4041538751653 1633.2489819494551 1608.0262110773438 1745.5934181851646 0.8860902740402762 1.0088080010122094 0.9450919023019553 0.904780849989924 1.0072652896278957 0.9850416015895244 1.1133449377505606 0.8921918114782689 0.935641120626755 0.9211917244447192 1.0 10.769501851719514 -5.244924132115779 23.249837070378376 0.972794213840852 0.8860900937038905 0.14425389520678866 0.05959184021731648 1745.0407908688046 2456527.3436116334 0.007716639238430854 0.26237170314231584 5.68952313727966e-06 5.244924132115779 -0.0867041201369615 VSSVTKRT(ph)PR ddPTM_A549_PD325901_60min_R1 1 VSSVTKRTPR 10 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 VS(0.001)S(0.001)VT(0.13)KRT(0.867)PR 49.3 0.010171 4233800.0 1169.9 1127.1 1653.9 1207.2 1407.4 1509.5 1417.6 1496.7 1526.1 1838.3 1647.7 True False 1288.66738676514 1222.0846725577942 1766.143599708637 1281.766002249878 1308.5490792664175 1497.20713247313 1471.5475437404853 1466.8471443615645 1461.9633241557067 1722.2294242737596 1445.0433456308765 0.8917845894806249 0.8457079687282716 1.22220804313491 0.8870086880959859 0.9055431335141934 1.0360984236216664 1.0183414554239807 1.015088681454859 1.0117089764649538 1.191818521901756 1.0 10.496897053228045 -7.278631999479546 24.53357671362178 1.0094328614081123 0.9562045478435608 0.11470704667149567 0.10814679687080583 1371.3001911447673 1956817.4528017347 0.013355434154050898 0.021384904994993827 5.264631773382596e-08 7.278631999479546 -0.05322831356455149 VST(ph)NGSDDPEDAGAGENRR ddPTM_A549_MK2206_60min_R1 1 VSTNGSDDPEDAGAGENRR 19 1 A0A590UK95;A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 A0A590UK95 ITCH E3 ubiquitin-protein ligase Itchy homolog 1 VS(0.124)T(0.473)NGS(0.403)DDPEDAGAGENRR 44.052 0.032327999999999996 8394300.0 476.62 513.98 662.86 352.67 806.27 383.21 354.5 522.52 605.06 843.58 892.66 True False 557.0618037597777 540.1393866139205 756.8635153511195 439.07416583195794 687.6687510594103 423.7610278457893 418.9080612776747 596.5888101503873 468.0148760822753 653.0146921082452 670.9878858373264 0.8302114174008072 0.8049912643950047 1.1279838747112831 0.6543697361749488 1.0248601585426058 0.6315479560662671 0.6243153864915444 0.8891200910518728 0.6975012305896389 0.9732138327554863 1.0 9.390142909702151 VST(ph)PVVK ddPTM_A549_PD325901_60min_R1 2 VSTPVVK 7 0 A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9 A0A0A0MRT2 WAC WW domain-containing adapter protein with coiled-coil 1 VS(0.069)T(0.931)PVVK;VS(0.005)T(0.995)PVVK 131.41 0.0060176000000000006 3630200000.0 15211.4 15712.300000000001 15127.2 15339.5 16126.199999999999 16782.4 16449.5 17128.6 17074.4 16464.0 17434.1 True False 16755.650129959165 17036.43066332166 16153.822759243301 16286.986076467872 14993.551344369833 16645.729698586987 17075.494724011794 16786.95663587325 16356.822345825429 15424.460230236187 15289.816223865551 1.0958699492938067 1.114233841262909 1.0565086278819453 1.0652179096205132 0.9806233851893338 1.088680822245922 1.1167887484062113 1.0979174890062344 1.069785411828195 1.0088061232652668 1.0 13.900283445861563 -10.382823132257379 0.8147304071060778 1.0012195199001528 1.0754273682103441 0.3728096037631655 0.03562758836486484 0.5327128877732176 0.6579095661041111 0.02263219950121388 0.007326034097204641 4.1416831177734777e-11 10.382823132257379 0.07420784831019134 VST(ph)SPLTK ddPTM_A549_MK2206_60min_R1 2 VSTSPLTK 8 0 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 VS(0.004)T(0.498)S(0.498)PLT(0.001)K;VS(0.003)T(0.926)S(0.068)PLT(0.002)K 99.815 0.0025436 41934000.0 5010.2 5443.299999999999 5646.9 5337.2 6952.3 5450.299999999999 5414.8 5686.299999999999 7585.400000000001 7162.0 8133.4 True False 5855.79927237052 5720.340719785886 6447.715331798929 6644.814239596008 5929.625879656118 6027.047128383668 6398.599069693517 6492.350438563401 5867.319011394725 5544.099225774976 6113.6523095795865 0.9578234050364571 0.9356666735565885 1.0546421362065181 1.086881278672674 0.9698991011256701 0.9858341337042973 1.0466082704224842 1.0619430268205514 0.9597076697019754 0.906839143777907 1.0 12.577818791497924 VSTFSGRS(ph)PPAPPPYK ddPTM_A549_MK2206_60min_R1 2 VSTFSGRSPPAPPPYK 16 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VS(0.036)T(0.122)FS(0.055)GRS(0.786)PPAPPPYK;VS(0.086)T(0.095)FS(0.095)GRS(0.725)PPAPPPYK 74.36399999999999 0.00015315 40932000.0 11634.099999999999 14659.8 16395.2 14672.2 19708.4 14664.5 14277.099999999999 14194.7 22703.0 20563.7 22396.0 True False 13597.651653563908 15405.921202931535 18720.28589277477 18266.889658660093 16809.32046755962 16216.28765649272 16871.06426422422 16206.842194445582 17560.806749241216 15918.345887890095 16834.455101844775 0.8077274596237946 0.915142254960382 1.1120220868166586 1.085089451850351 0.9985069529050334 0.9632796284992726 1.002174656807005 0.9627185493321719 1.043146727530067 0.9455812969049239 1.0 14.039129404273737 -5.5283526850083975 5.230937912778714 1.0194330059607486 0.8290446910054344 0.6089483041700687 0.04955021933269376 0.06723151708917406 5.658181430672667 0.00632554719869092 0.029849910120457384 2.9624246651430336e-06 5.5283526850083975 -0.19038831495531416 VSTFSGRS(ph)PPAPPPYK ddPTM_A549_PD325901_60min_R1 2 VSTFSGRSPPAPPPYK 16 1 Q9UMN6;A0A669KBI7 Q9UMN6 KMT2B Histone-lysine N-methyltransferase 2B 1 VS(0.004)T(0.004)FS(0.047)GRS(0.945)PPAPPPYK;VS(0.007)T(0.003)FS(0.011)GRS(0.98)PPAPPPYK 108.45 1.774e-07 69682000.0 20477.3 21163.0 22388.0 23626.0 27832.0 26132.0 24732.0 27151.0 30172.0 23993.0 26104.0 True False 22556.140421408498 22946.480281554963 23907.384309980625 25085.32436146092 25877.17633518755 25919.18965603698 25673.189793869682 26609.45200545254 28903.975765956322 22478.077885329003 22893.373486889854 0.9852694027084092 1.0023197452614627 1.0442927654882954 1.095746084596327 1.13033478224633 1.1321699561176466 1.121424494671863 1.162321141560493 1.2625476879809132 0.9818595716442282 1.0 14.48264244856814 -6.1216918305582055 1.3923156415934577 1.1307823835343778 0.984048287882254 0.27274391255083685 0.07249929586750843 0.518213323194882 1.7830779562313932 0.01367076404480118 0.06716846863121145 7.556282209571109e-07 6.1216918305582055 -0.1467340956521238 VSTLAGPS(ph)SDDENEEESKPEKEDEPQEDAK ddPTM_A549_MK2206_60min_R1 1 VSTLAGPSSDDENEEESKPEKEDEPQEDAK 30 2 A0A087X2H1;Q9ULT8;H0YJP0;G3V4V5 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 VSTLAGPS(0.558)S(0.442)DDENEEESKPEKEDEPQEDAK 244.85 1.5649e-121 171860000.0 7628.6 5918.3 5987.2 5220.7 7510.1 6748.9 6142.7 7430.1 8152.5 8460.6 8332.2 True False 8916.121178636738 6219.516190896852 6836.274988851682 6499.771734366131 6405.3742385693095 7463.064118442749 7258.749077603307 8483.339428726933 6305.971766867337 6549.344583858102 6263.084782978705 1.42359899116618 0.9930435889674909 1.0915188322902392 1.037790794726374 1.0227187497089782 1.1915955758295413 1.1589734658120128 1.3544985774074547 1.0068475815631917 1.0457058798976138 1.0 12.612657693407586 -8.937798083693709 24.99999667485902 1.0030181431933791 1.1461940188921125 0.1904395812145966 0.12715134481333518 72.82892822078561 29270.893987628177 0.021079341508639608 0.022440435612880758 1.1539896569250932e-09 8.937798083693709 0.14317587569873336 VSTLAGPS(ph)SDDENEEESKPEKEDEPQEDAK ddPTM_A549_PD325901_60min_R1 1 VSTLAGPSSDDENEEESKPEKEDEPQEDAK 30 2 A0A087X2H1;Q9ULT8;H0YJP0;G3V4V5 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 VS(0.002)T(0.002)LAGPS(0.332)S(0.332)DDENEEES(0.332)KPEKEDEPQEDAK 53.32 0.0013223 9705500.0 2759.7 2856.1 3406.9 3383.4 3555.7 3200.9 3521.2 3565.2 3267.5 3056.5 3512.9 True False 3039.8627124162354 3096.7935704838233 3638.1127213539858 3592.3849337410866 3305.959898499077 3174.832931655013 3655.2011928745746 3494.089289154704 3130.1783380373317 2863.5120683744462 3080.8355701078494 0.9867007320711441 1.0051797637403332 1.180885067886511 1.1660424102462987 1.0730724906501086 1.030510346757608 1.1864317681669128 1.1341368955410978 1.0160160342240385 0.9294595583607225 1.0 11.589105969791587 -8.83803849546892 7.100723102347789 1.0071838556103243 1.0976088179518138 0.33103057505716027 0.06936659471843687 0.21947454283885576 16.99417313856531 0.011776902214467935 0.012517242460850125 1.451982909435565e-09 8.83803849546892 0.09042496234148945 VSTLAGPSS(ph)DDENEEESKPEKEDEPQEDAK ddPTM_A549_PD325901_60min_R1 1 VSTLAGPSSDDENEEESKPEKEDEPQEDAK 30 2 A0A087X2H1;Q9ULT8;H0YJP0;G3V4V5 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 VSTLAGPS(0.167)S(0.833)DDENEEESKPEKEDEPQEDAK 312.78 6.808699999999997e-205 348080000.0 11139.0 10092.0 9186.2 9200.8 12772.0 8920.2 10884.0 10495.0 11413.0 10962.0 9396.9 True False 12269.8230799016 10942.488257877076 9809.6307731081 9769.112519467093 11874.93878100802 8847.55684868288 11298.196575953329 10285.66899183177 10933.35129977661 10269.857449213376 8241.140871856998 1.488850059802073 1.3277880366351966 1.1903243647499584 1.1854077816856676 1.4409338422499516 1.0735839838506773 1.3709505457595066 1.2480879955537119 1.3266793360022942 1.2461693846642425 1.0 13.0086283570508 -10.784838748686216 0.7684555194064567 0.9757691009656237 1.2916293378716108 0.09728581282381898 0.13419110449090163 0.5410698426560353 0.4947192187682068 0.10868572009967457 0.020334660365210443 1.6411990288680628e-11 10.784838748686216 0.3158602369059871 VSTNGS(ph)DDPEDAGAGENRR ddPTM_A549_MK2206_60min_R1 1 VSTNGSDDPEDAGAGENRR 19 1 A0A590UK95;A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 A0A590UK95 ITCH E3 ubiquitin-protein ligase Itchy homolog 1 VS(0.011)T(0.053)NGS(0.935)DDPEDAGAGENRR 97.5 6.022e-07 7336800.0 891.5 1046.5 881.75 810.15 1336.1 969.74 891.3 866.77 1446.4 1525.0 1505.8 True False 1041.9634049176316 1099.762380037097 1006.7954087753825 1008.636786369016 1139.561459920967 1072.357243138685 1053.2376728259271 989.6373018717969 1118.7927094261781 1180.5014408415013 1131.8683020341973 0.9205694717707101 0.9716345780340351 0.8894987225686651 0.8911255704893324 1.0067968666256875 0.9474222762590321 0.9305302312407239 0.8743396206901612 0.9884477791413367 1.0429671355933374 1.0 10.144490388542653 -8.9264260403559 12.84499861506667 0.9949075524269996 0.9310809873781446 0.4527925169023673 0.038889271670407406 0.5870245780205785 101.03907697264108 0.006220662085381017 0.006619207476105794 1.18460608631076e-09 8.9264260403559 -0.06382656504885498 VSTNGS(ph)DDPEDAGAGENRR ddPTM_A549_PD325901_60min_R1 2 VSTNGSDDPEDAGAGENRR 19 1 A0A590UK95;A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 A0A590UK95 ITCH E3 ubiquitin-protein ligase Itchy homolog 1 VS(0.002)T(0.009)NGS(0.989)DDPEDAGAGENRR;VS(0.196)T(0.196)NGS(0.607)DDPEDAGAGENRR 115.54 2.6867e-14 24042000.0 1611.1999999999998 1818.48 1430.85 1932.23 2202.48 1827.65 1893.58 2351.9700000000003 2137.0699999999997 2118.63 2401.9 True False 1774.7678378972496 1971.729691556115 1527.9560854000265 2051.579458687277 2047.7854029435125 1812.7662243554264 1965.6412231067354 2305.058113265228 2047.256379761113 1984.8593402323413 2106.4815268985876 0.8425271312539225 0.9360298993265466 0.725359356770465 0.9739366011473436 0.9721354670308956 0.8605659253154696 0.9331395495315765 1.094269322484403 0.9718843263607098 0.9422628752670275 1.0 11.040619548690117 -7.025481007204323 0.6830592225127091 0.9932234448930505 0.8471473019827933 0.3335517645960081 0.07459668290020494 0.6497337256179383 0.5548685618331625 0.013454160926509215 0.04687060584553164 9.430158510254368e-08 7.025481007204323 -0.14607614291025717 VSTS(ph)PLTK ddPTM_A549_PD325901_60min_R1 4 VSTSPLTK 8 0 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 VS(0.005)T(0.086)S(0.9)PLT(0.009)K;VST(0.023)S(0.905)PLT(0.072)K;VS(0.002)T(0.101)S(0.89)PLT(0.006)K;VST(0.145)S(0.854)PLTK 131.45 0.0010729000000000001 70213200.0 13631.4 14653.3 13654.4 14327.599999999999 16870.0 14603.9 15034.5 15545.3 14686.4 15342.100000000002 16866.3 True False 15015.249693093701 15888.185016760819 14581.06969457743 15212.583311659499 15685.109398340539 14484.970680307619 15606.646124694067 15235.236796448075 14069.181681331744 14373.397187700835 14791.852024284797 1.0151027517340043 1.0741173580344163 0.9857501055742506 1.0284434489125471 1.060388474180868 0.9792533522189547 1.0550839813075177 1.0299749329181593 0.9511440256590861 0.9717104500574401 1.0 13.852515076947576 -8.743404573467895 24.91188171641593 0.976929124512761 1.0289126752636397 0.403192298470477 0.0293329127655648 175.85093063619416 242906.65732236722 0.005090012744391703 0.005765916969475333 1.8054914100434533e-09 8.743404573467895 0.05198355075087868 VSTVTS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 VSTVTSPSR 9 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 VS(0.001)T(0.004)VT(0.222)S(0.757)PS(0.016)R;VSTVT(0.007)S(0.992)PS(0.001)R 102.55 0.00068772 138633000.0 5315.1 6226.4 5309.5 4824.9 6510.7 5686.799999999999 5394.8 5166.4 8072.799999999999 7142.299999999999 8614.2 True False 6212.15893828122 6543.297164895346 6062.466938353148 6007.000716597993 5552.984654672136 6288.5734014076725 6374.965328577713 5898.753021436429 6244.32368961259 5528.849469457216 6475.056400174646 0.9593984290412767 1.0105390224429334 0.9362801748243661 0.9277140375852126 0.85759633761991 0.9711997877328229 0.98454205409018 0.9109963924449102 0.9643659149353768 0.8538689283552946 1.0 12.660677043931996 -9.756502928412798 0.7621835372453561 0.9966215914474801 0.9449098238382873 0.0 0.0574854309312487 0.685046573973761 0.8367817631405362 0.01617264637983894 0.008634745612642828 1.7518506215807486e-10 9.756502928412798 -0.05171176760919283 VSTVTS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 VSTVTSPSR 9 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 VSTVT(0.003)S(0.997)PS(0.001)R;VSTVT(0.004)S(0.984)PS(0.011)R 141.27 3.9785e-05 199466000.0 14682.4 13643.4 13484.7 13654.4 15965.2 14503.2 14798.0 14841.3 15180.2 15215.099999999999 16624.0 True False 16172.946439388386 14793.177199516473 14399.852832088423 14497.801276607637 14843.859428949987 14385.090747720638 15361.145987776317 14545.278628725377 14542.228984567493 14254.415989374784 14579.353388218542 1.1093047825054858 1.014666206765433 0.9876880303707316 0.9944063286320499 1.0181425083601574 0.9866754968258822 1.0536232697527954 0.9976628072188235 0.9974536316760764 0.9777124958706099 1.0 13.831639115380487 -5.26810094215003 3.834513080493672 1.0019482888544822 1.119266765327718 0.7201839027812758 0.01921978935899689 0.08312196708435494 2.387634580140585 0.0022700791155056176 0.027071361206178 5.3938523977133755e-06 5.26810094215003 0.11731847647323579 VSVGAPDLSLEASEGS(ph)IKLPK ddPTM_A549_MK2206_60min_R1 2 VSVGAPDLSLEASEGSIKLPK 21 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSVGAPDLSLEAS(0.037)EGS(0.963)IKLPK;VSVGAPDLSLEAS(0.002)EGS(0.998)IKLPK 227.3 2.2706999999999997e-76 37208000.0 5784.299999999999 8160.3 7151.1 5051.3 9029.2 6980.0 5638.9 6909.9 10174.9 9841.1 9859.9 True False 6760.54842744258 8575.624414540593 8165.233510284815 6288.868726761477 7701.016640908911 7718.6189670509875 6663.415138896132 7889.399485681241 7870.301395976499 7617.98867505922 7411.4147106036535 0.9121805608543445 1.1570833301597983 1.101710513999798 0.8485382308675659 1.0390751215002068 1.0414501506720182 0.8990746570101732 1.0644930548001483 1.0619162067285626 1.0278724066216425 1.0 12.855533238956275 -11.412774765579785 2.196658666249127 0.9997114356626909 1.0248323933658203 0.0 0.08900419367289752 1.9846705438226153 17.32071395674358 0.06872021883946659 0.012449154228267657 3.865674072129322e-12 11.412774765579785 0.025120957703129387 VSVGAPDLSLEASEGS(ph)IKLPK ddPTM_A549_PD325901_60min_R1 4 VSVGAPDLSLEASEGSIKLPK 21 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSVGAPDLSLEASEGS(1)IKLPK;VSVGAPDLSLEAS(0.044)EGS(0.956)IKLPK;VSVGAPDLSLEAS(0.004)EGS(0.996)IKLPK;VSVGAPDLSLEAS(0.003)EGS(0.997)IKLPK 249.91 1.5816999999999996e-98 87927000.0 16537.8 19601.8 19649.2 18069.300000000003 23871.9 21121.0 22828.4 22919.1 20863.699999999997 23064.799999999996 22982.399999999998 True False 18216.705281515093 21253.71247852308 20982.71287223831 19185.399622642246 22195.2200975842 20948.997578645234 23697.147254179796 22461.960570813877 19986.871244471145 21608.484591736596 20155.710497437063 0.9037987166878325 1.0544759749960506 1.0410306734117065 0.9518592572105955 1.1011876808017496 1.0393579319026756 1.175703890825037 1.1144216709041375 0.9916232547105007 1.0720775432096161 1.0 14.29890101925357 -3.736715025769735 13.198746399557875 1.0216582802108085 0.5400226203000569 0.0 0.07573977999199666 0.0 0.0 0.0099125763071096 0.0 0.00018335171402664312 3.736715025769735 -0.48163565991075163 VSVGDSSQEFS(ph)PIQEAQQDR ddPTM_A549_PD325901_60min_R1 1 VSVGDSSQEFSPIQEAQQDR 20 0 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 VS(0.001)VGDS(0.059)S(0.059)QEFS(0.882)PIQEAQQDR 52.611999999999995 0.008739299999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VSVS(ph)PGR ddPTM_A549_MK2206_60min_R1 2 VSVSPGR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VSVS(1)PGR;VSVS(1)PGR 121.67 0.0064759 624130000.0 5018.5 5210.6 4563.3 4295.6 5657.6 4956.3 4351.7 4692.0 6564.4 7162.9 7545.3 True False 5865.500109455002 5475.797283727949 5210.444557827844 5348.022192836814 4825.374534577404 5480.772376274325 5142.347560682813 5357.105368647363 5077.573881192752 5544.795915149897 5671.593770313873 1.0341890387418204 0.9654776955975307 0.918691424110844 0.9429487388235225 0.8507969241087522 0.966354890394594 0.906684746640137 0.9445502596972657 0.8952640275066372 0.9776433467735897 1.0 12.469538487454308 -5.327701695897128 2.9873859839583643 0.9386248584117659 1.0431251709100937 0.3494327906777771 0.039534926589763375 0.3345105489860477 4.57219692104969 0.006338599914220524 0.07599950703975288 4.702169759156791e-06 5.327701695897128 0.10450031249832781 VSVS(ph)PGR ddPTM_A549_PD325901_60min_R1 4 VSVSPGR 7 0 A9Z1X7;Q8IYB3;Q8IYB3-2;E9PCT1;M0R088 A9Z1X7 SRRM1 Serine/arginine repetitive matrix protein 1 1 VSVS(1)PGR;VSVS(1)PGR;VS(0.054)VS(0.946)PGR;VS(0.011)VS(0.989)PGR 151.5 0.0027634 899470000.0 12659.599999999999 12342.5 11919.7 11391.400000000001 13210.9 11639.0 11117.099999999999 12626.2 12808.9 13733.1 13503.7 True False 13944.793272495048 13382.64579100751 12728.642520978918 12095.020906253529 12283.011959130816 11544.215842898153 11540.167324010541 12374.36053593771 12270.586477149614 12865.989722294487 11842.830507007144 1.1774882080972298 1.1300208833597079 1.0747973226035497 1.0212947740067013 1.0371686018695636 0.9747851948119745 0.9744433408197877 1.0448820092980367 1.0361194032025856 1.0863948204512395 1.0 13.53172631443406 -5.759624583622332 1.3021724351201975 1.013956956740328 1.1901047955011284 0.7342951550822243 0.030953186715888835 0.186576980517368 0.46590144210828516 0.0035961219699649524 0.03422968008503632 1.7393036821741504e-06 5.759624583622332 0.17614783876080042 VSVT(ph)PPEES(ph)QNSDTPPRPDRLPLDEK ddPTM_A549_PD325901_60min_R1 1 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 VS(0.085)VT(0.914)PPEES(0.554)QNS(0.394)DT(0.053)PPRPDRLPLDEK 80.418 1.8661000000000002e-06 8035100.0 1571.7 1687.3 1711.5 1502.5 1502.5 1916.8 1983.9 1989.7 1924.8 1775.5 1722.5 True False 1731.257826975612 1829.494692579866 1827.6526820855754 1595.3060125749187 1396.9695833436076 1901.1902163130153 2059.3984001317344 1950.013872610547 1843.907349672304 1663.3946269912735 1510.6434198271431 1.1460400278801155 1.2110698451850457 1.209850490259777 1.0560440615148365 0.9247513774650123 1.258530101385912 1.3632591074122464 1.2908498769575147 1.2206105858411609 1.1011166534466545 1.0 10.560947444067928 -10.719344164048978 1.054373759407323 1.0034975857638866 1.187335550013396 0.15570659882963278 0.11499116451510698 0.5823303706061901 1.1829914704220654 0.07574698777765898 0.02120312246761715 1.9083403624066465e-11 10.719344164048978 0.18383796424950938 VSVT(ph)PPEESQNSDT(ph)PPRPDRLPLDEK ddPTM_A549_MK2206_60min_R1 1 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 VS(0.202)VT(0.748)PPEES(0.246)QNS(0.21)DT(0.594)PPRPDRLPLDEK 48.388000000000005 0.003133 7532000.0 2227.4 2337.1 2749.0 2079.8 2812.6 2595.5 2189.6 2076.1 3014.4 3126.3 3753.5 True False 2603.3306652984106 2456.0484074387964 3138.8495364032065 2589.3510933657685 2398.8702658286898 2870.1540872465393 2587.4219773585214 2370.393532789595 2331.643213007653 2420.0666586903526 2821.4023586700473 0.9227080488178115 0.8705062572487989 1.112513969075576 0.917753217795684 0.8502403985227649 1.0172792542072846 0.9170694741242722 0.8401472854467136 0.8264128672901312 0.8577531138916051 1.0 11.462196707219722 -7.977631605764769 24.873338468243745 0.9084068955305892 0.9482652473079198 0.10018045761643035 0.08051965261094608 674.5118154386787 750045.691471178 0.014402843848334072 0.01989958549175208 1.052854588601781e-08 7.977631605764769 0.03985835177733066 VSVT(ph)PPEESQNSDT(ph)PPRPDRLPLDEK ddPTM_A549_PD325901_60min_R1 1 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 VS(0.094)VT(0.688)PPEES(0.282)QNS(0.364)DT(0.572)PPRPDRLPLDEK 51.607 0.0023045 15959000.0 2162.6 2435.8 2148.0 2556.7 2766.0 2713.5 2513.1 2966.0 2607.2 2668.9 2346.8 True False 2382.145559978024 2641.0734144408448 2293.776196973306 2714.6215523130086 2571.7257021819764 2691.402155658056 2608.7373957210857 2906.8408032180123 2497.6284507822256 2500.385198522676 2058.1584775909096 1.1574160036336676 1.283221599889743 1.1144798721516278 1.3189565244220134 1.24952754133501 1.307674887508353 1.2675104585603305 1.4123503291255257 1.2135258183352913 1.2148652427627422 1.0 11.007138358260278 -10.133077204756518 0.8599791792223259 1.0152145744743737 1.260966948601453 0.16759030992100266 0.09680012625677742 0.27181295026409125 0.39870774149355476 0.03541094818041446 0.01522244591930034 7.360762332073587e-11 10.133077204756518 0.2457523741270793 VSVT(ph)PPEESQNSDTPPRPDR ddPTM_A549_MK2206_60min_R1 1 VSVTPPEESQNSDTPPRPDR 20 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VS(0.002)VT(0.991)PPEES(0.003)QNS(0.003)DTPPRPDR 103.92 5.642100000000001e-10 13298000.0 5604.7 6763.3 4994.2 5093.6 8431.5 5008.2 5626.4 5757.7 9572.8 8393.2 8510.2 True False 6550.636338241 7107.523081610032 5702.452657222585 6341.5322286603905 7191.237519140516 5538.164399825894 6648.644050698754 6573.87160721673 7404.576084620375 6497.170290669443 6396.882470428626 1.0240357499958994 1.111091709823737 0.8914424617903742 0.9913473098772554 1.1241784654296867 0.8657599112423284 1.0393569182228946 1.0276680301078354 1.1575288617307091 1.0156776086952395 1.0 12.643153261612055 -8.537376612955901 24.856780822295153 1.0753470435792436 1.0068743606153534 0.05697884368450523 0.08281496833318619 372.10265651956587 637971.6329978164 0.014878687959149426 0.016874931871388582 2.9015054258960467e-09 8.537376612955901 -0.0684726829638902 VSVT(ph)PPEESQNSDTPPRPDRLPLDEK ddPTM_A549_MK2206_60min_R1 2 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VS(0.121)VT(0.878)PPEES(0.001)QNSDTPPRPDRLPLDEK;VS(0.116)VT(0.876)PPEES(0.008)QNSDTPPRPDRLPLDEK 130.25 3.1911e-24 55320000.0 7087.3 8256.6 8140.9 7467.8 10874.400000000001 8233.0 7245.799999999999 6993.4 12641.599999999999 11539.5 11483.9 True False 8283.462972151132 8676.825673210036 9295.402033795868 9297.411335242286 9274.790165230579 9104.210595376899 8562.268068845628 7984.735866389273 9778.297784486975 8932.71893546919 8632.130690483807 0.9596081511234472 1.005177746297968 1.0768375001601007 1.0770702702047705 1.074449692409691 1.0546886883227473 0.9919066770252682 0.925001735109475 1.1327791636967126 1.0348220220202127 1.0 13.075500992060489 -8.80299732093617 24.999756649849747 1.0627011985537276 1.0258111280886801 0.06451976469620158 0.05573566020859451 343.853006335771 206847.98007777124 0.011722649750050662 0.012479734813323847 1.5739925740382814e-09 8.80299732093617 -0.03689007046504744 VSVT(ph)PPEESQNSDTPPRPDRLPLDEK ddPTM_A549_PD325901_60min_R1 4 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VS(0.017)VT(0.818)PPEES(0.069)QNS(0.069)DT(0.028)PPRPDRLPLDEK;VS(0.003)VT(0.996)PPEESQNSDTPPRPDRLPLDEK;VS(0.046)VT(0.538)PPEES(0.186)QNS(0.186)DT(0.045)PPRPDRLPLDEK;VS(0.017)VT(0.601)PPEES(0.187)QNS(0.187)DT(0.007)PPRPDRLPLDEK 116.52 1.7751e-17 69945000.0 12969.499999999998 15251.2 14008.6 14608.800000000001 16540.3 15380.300000000001 13856.599999999999 14409.3 14994.4 14576.600000000002 16220.9 True False 14286.154092358725 16536.472148091056 14959.307836555055 15511.152397007976 15378.566388937286 15255.04793612222 14383.920495622453 14121.895207622829 14364.23751243059 13656.230988341878 14225.832132757097 1.0042403115008456 1.1624256489019975 1.0515594235158323 1.0903511479860104 1.0810310599353865 1.0723483725774607 1.011112767350975 0.9926937894272674 1.0097291587853616 0.9599600825386075 1.0 13.796225424256324 -7.753382577291172 3.8794862385659483 1.0036935191548557 1.0814315429926646 0.5372332873880685 0.03762998324524278 0.11731692267314241 3.8853092048687627 0.004833001928358397 0.007058815925596529 1.7644827733919358e-08 7.753382577291172 0.07773802383780892 VSVTPPEES(ph)QNSDTPPRPDR ddPTM_A549_PD325901_60min_R1 1 VSVTPPEESQNSDTPPRPDR 20 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VSVTPPEES(0.632)QNS(0.184)DT(0.184)PPRPDR 143.98 1.8989e-21 27096000.0 4467.3 4475.0 4347.0 4751.9 5675.7 4635.0 4791.3 5350.2 4865.5 5097.8 4848.1 True False 4920.8170073475585 4852.123955013868 4642.0135606345275 5045.41407065208 5277.058412102037 4597.25409672935 4973.635543399959 5243.486063849293 4661.019955232019 4775.924038004009 4251.814434638015 1.1573451953263572 1.1411890216763332 1.091772379061913 1.186649640574361 1.2411309320349744 1.0812452348054424 1.1697677826392245 1.2332349269837561 1.0962425634713389 1.1232672806922759 1.0 12.05386291820339 -9.59158807105158 0.9392627357174166 1.0161070819535885 1.1598460071963934 0.22459309881343814 0.059265680878451764 0.24641616382591439 0.45653837303803546 0.01574611038018328 0.010508885243897705 2.561013860630965e-10 9.59158807105158 0.14373892524280496 VSVTPPEES(ph)QNSDTPPRPDRLPLDEK ddPTM_A549_MK2206_60min_R1 1 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VS(0.001)VT(0.005)PPEES(0.331)QNS(0.331)DT(0.331)PPRPDRLPLDEK 58.086999999999996 0.00070598 4820600.0 985.64 1634.0 1443.6 1190.2 2056.2 1642.1 1109.3 1070.4 2451.7 2167.9 1947.7 True False 1151.9919354156084 1717.1636206217077 1648.3241872505148 1481.7990534301086 1753.7357038316698 1815.8659320622387 1310.8454509882208 1222.1324779625186 1896.3938645603978 1678.1698843280599 1464.0323362146407 0.7868623574218074 1.172900063848013 1.1258796315335313 1.0121354677598209 1.1978804432462726 1.240318186384659 0.8953664605370019 0.8347715058824647 1.2953223898480675 1.1462655863647704 1.0 10.515731703571818 -5.254410027773971 24.212922600264992 1.1103110941857437 0.7868621211640369 0.28101727327857906 0.1375705315296159 561.6132646070672 1934423.4756815985 0.02111075345324858 0.28586294141645713 5.566599448341715e-06 5.254410027773971 -0.32344897302170683 VSVTPPEESQNS(ph)DTPPRPDR ddPTM_A549_MK2206_60min_R1 2 VSVTPPEESQNSDTPPRPDR 20 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VSVT(0.006)PPEES(0.258)QNS(0.44)DT(0.295)PPRPDR;VSVT(0.002)PPEES(0.129)QNS(0.488)DT(0.381)PPRPDR 140.66 2.5278e-21 36863000.0 3838.1 4401.2 3761.9 3596.5 4883.0 3987.7 3833.2 4087.2 5812.4 5039.6 5443.0 True False 4485.877447464231 4625.202280954873 4295.393987266356 4477.64266145302 4164.717168470987 4409.675767178971 4529.642822255519 4666.573116525038 4495.900680495518 3901.1508598457904 4091.352880842167 1.0964288777116813 1.1304823650417604 1.049871304765623 1.094416148364924 1.0179315472816706 1.0778038207917378 1.1071259200020738 1.1405941390136134 1.0988787355761105 0.9535112158408527 1.0 11.99836226028584 -10.64733396296903 0.9490878921049053 1.0006791754780333 1.0897066105581565 0.5735515321739799 0.03619601616180814 0.3757089499418022 0.6100179361878546 0.02218778521197928 0.006142065668599177 2.252506417770065e-11 10.64733396296903 0.08902743508012323 VSVTPPEESQNS(ph)DTPPRPDR ddPTM_A549_PD325901_60min_R1 1 VSVTPPEESQNSDTPPRPDR 20 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VSVTPPEES(0.007)QNS(0.654)DT(0.338)PPRPDR 123.29 3.6018e-15 22669000.0 5454.0 5153.2 4878.7 5729.5 5993.2 4056.7 4965.8 6045.9 5093.5 5021.6 6065.3 True False 6007.68606497741 5587.478249156976 5209.797920006362 6083.398202361398 5572.258307417575 4023.6635801946004 5154.776236390025 5925.3097815832 4879.43790812338 4704.535319008384 5319.306551104542 1.129411513936892 1.0504147853627177 0.9794129873798227 1.1436449740047776 1.0475535210995703 0.7564263389480901 0.9690692173624862 1.1139252315422246 0.9173071454417635 0.8844264329965149 1.0 12.377022466386599 -7.023580313232714 24.925269385498343 0.9583353065727092 1.070604972035813 0.3275862761530489 0.09119864634120443 754.0166397375457 797023.2633327012 0.01300206275520678 0.022610905702855618 9.471520133305476e-08 7.023580313232714 0.11226966546310391 VSVTPPEESQNS(ph)DTPPRPDRLPLDEK ddPTM_A549_MK2206_60min_R1 2 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VS(0.001)VT(0.005)PPEES(0.141)QNS(0.483)DT(0.371)PPRPDRLPLDEK;VS(0.021)VT(0.038)PPEES(0.146)QNS(0.689)DT(0.106)PPRPDRLPLDEK 100.1 4.6738999999999996e-11 117411000.0 4732.7 5547.1 4608.0 4264.1 7368.0 4875.8 5133.3 4592.0 6943.4 6489.6 7490.6 True False 5531.464056594144 5829.4236964202455 5261.483689976706 5308.804691422724 6284.176960330585 5391.753919705902 6065.954163488535 5242.930062410203 5370.730986331391 5023.594852777055 5630.477289957073 0.982414770850859 1.0353338440451625 0.9344649519076242 0.9428693906450689 1.1161002232509663 0.9576015747942054 1.0773427990391171 0.9311697379122501 0.9538678001438735 0.8922147438082209 1.0 12.459041507974346 VSVTPPEESQNSDT(ph)PPRPDRLPLDEK ddPTM_A549_PD325901_60min_R1 3 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VSVTPPEES(0.063)QNS(0.063)DT(0.873)PPRPDRLPLDEK;VSVTPPEESQNS(0.142)DT(0.858)PPRPDRLPLDEK;VSVTPPEES(0.067)QNS(0.067)DT(0.865)PPRPDRLPLDEK 170.97 1.973e-48 122930900.0 8084.9 7238.299999999999 8739.2 7989.2 9574.7 9165.2 7966.6 8598.2 9975.4 8643.1 8917.0 True False 8905.673096211194 7848.296943816061 9332.294665078734 8482.67473921034 8902.206102921822 9090.561649912372 8269.773322490793 8426.702155842588 9556.168628387935 8097.373190959331 7820.26552952026 1.1387942087891636 1.003584458122296 1.1933475442554737 1.0847041839167213 1.1383508743171709 1.162436443570483 1.0574798632186737 1.0775468075902443 1.2219749562613849 1.0354345591454706 1.0 12.933001878335187 -2.1983082913495555 17.75175568223385 1.107083858294481 1.3455213479899042 0.0 0.07188059123083114 0.0 0.0 0.011068547953744047 0.0 0.006334199076941627 2.1983082913495555 0.2384374896954231 VSYRAS(ph)QPDLVDT(ph)PTSSKPQPK ddPTM_A549_MK2206_60min_R1 1 VSYRASQPDLVDTPTSSKPQPK 22 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 VS(0.425)Y(0.007)RAS(0.569)QPDLVDT(0.695)PT(0.096)S(0.101)S(0.106)KPQPK 51.025 0.0050756 2753600.0 1328.4 1501.9 1661.5 1060.4 2046.6 1410.7 1498.2 1309.1 1805.3 1682.4 2303.2 True False 1552.6014437381746 1578.3402948664286 1897.1256837882597 1320.1980476031658 1745.5478511146252 1559.9793376531275 1770.4035469850842 1494.66893395061 1396.402432471708 1302.344671522455 1731.2518749137748 0.8968085269600081 0.9116757172869707 1.0958114825913163 0.7625684435252487 1.0082575946388865 0.9010701217180327 1.0226146597376302 0.8633457416616817 0.8065853690649466 0.7522560352966078 1.0 10.757599918236817 VT(ph)AEDKGTGNK ddPTM_A549_MK2206_60min_R1 1 VTAEDKGTGNK 11 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 1 VT(0.761)AEDKGT(0.239)GNK 76.72800000000001 0.00047704 17568000.0 7095.7 6037.7 5254.5 4665.7 5484.6 4416.1 4543.5 5025.7 5610.7 10631.0 9766.5 True False 8293.280686790848 6344.993140898218 5999.667111324349 5808.796709451231 4677.822605405688 4883.408770830068 5368.995137983397 5738.10836556075 4339.885408446799 8229.449716449844 7341.208508312513 1.129688753207363 0.8642981783876222 0.8172587802854088 0.7912589191376163 0.6372006189592557 0.6652050224837698 0.7313503126772708 0.78162993995654 0.5911677080868512 1.1209938673083006 1.0 12.841801863457198 -5.077606788224164 1.5091565608966897 0.7738855282824462 1.4025926024955555 0.29774412060601974 0.14725870787100642 1.6823374188946008 2.472367609180443 0.02186767524951198 1.7865364975735059 8.363599187884525e-06 5.077606788224164 0.6287070742131093 VT(ph)KSPGETSK ddPTM_A549_PD325901_60min_R1 1 VTKSPGETSK 10 1 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.644)KS(0.354)PGET(0.001)SK 72.937 0.00074924 37429000.0 5260.4 5550.6 5396.3 4891.4 5366.2 4856.3 4065.8 4590.0 4373.0 5425.0 6067.7 True False 5794.431935498196 6018.36854183239 5762.525368588016 5193.530668824594 4989.296624385002 4816.751902901135 4220.526243891128 4498.44884921466 4189.218017517136 5082.464574163708 5321.411366319394 1.08889005878641 1.130972241673369 1.0828941744779492 0.9759686502899981 0.9375889742265684 0.9051643579723264 0.7931215899984624 0.8453488256304561 0.7872381458858442 0.9550971019327611 1.0 12.37759321857374 -6.4786542391351984 1.4667347880693842 0.8850098132373433 1.115719814286874 0.7076235903086326 0.060316052919912946 0.23805473026322352 0.9864368191754918 0.012625774629472833 0.04104641071961198 3.321587984843068e-07 6.4786542391351984 0.23071000104953077 VT(ph)KSPGETSKPRPFAGGGYR ddPTM_A549_MK2206_60min_R1 1 VTKSPGETSKPRPFAGGGYR 20 3 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.469)KS(0.469)PGET(0.031)S(0.031)KPRPFAGGGYR 42.746 0.015816999999999998 114430000.0 1756.6 1707.1 2021.7 1833.6 2577.1 1416.0 2084.0 1769.0 3079.3 2749.3 2542.7 True False 2053.071135253294 1793.9840983863635 2308.4074600750673 2282.8320823134313 2198.012003863728 1565.840180135271 2462.635824267062 2019.761167335289 2381.8434666316575 2128.2312205282246 1911.277415050041 1.074187932681421 0.9386309304237728 1.2077825238230153 1.1944012231493157 1.150022485776184 0.8192636860590299 1.2884763901228777 1.0567598148918678 1.2462049977026992 1.1135124622777501 1.0 10.900321480177835 VT(ph)LDWAKPK ddPTM_A549_PD325901_60min_R1 1 VTLDWAKPK 9 1 P19338;H7BY16 P19338 NCL Nucleolin 1 VT(1)LDWAKPK 42.001000000000005 0.032704000000000004 5808100.0 2017.9 2514.2 2766.9 2419.1 3337.8 2519.5 2733.0 2591.1 2897.1 3203.9 2908.3 True False 2222.755722500533 2726.0804575856664 2954.67847272134 2568.5223128252824 3103.364442784887 2498.9820273375635 2837.005810554985 2539.418477821372 2775.3449619366343 3001.605207219006 2550.5975372326748 0.871464701919284 1.0688007095558423 1.1584259882596302 1.007027676978021 1.216720551746454 0.9797633655872213 1.1122906570485656 0.9956170821746219 1.0881155970015575 1.1768243179892903 1.0 11.316619556458022 -5.259215115466389 24.034160938506254 1.0573728795805246 0.8714645880102273 0.330594834997074 0.0795596023909473 93.22597848351602 1007224.2933840537 0.009194962587921721 0.08363501908096653 5.505349369768796e-06 5.259215115466389 -0.1859082915702973 VT(ph)LELGGK ddPTM_A549_MK2206_60min_R1 1 VTLELGGK 8 0 P00352;P05091;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;O94788 P00352 ALDH1A1;ALDH2;ALDH1A3;ALDH1A2;ALDH1B1 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 1 VT(1)LELGGK 63.216 0.010593 1499200.0 941.39 894.42 907.53 746.2 1126.0 815.65 866.86 736.73 1377.8 1185.0 1289.8 True False 1100.2736172242392 939.942157623297 1036.2314004263371 929.0190334981914 960.3668916031805 901.9615416153491 1024.3572411824116 841.1637336409993 1065.730499894488 917.3076769817575 969.5070633309257 1.1348794236155848 0.9695052188624054 1.0688229509810556 0.958238540631535 0.9905723515862356 0.9303300364996712 1.0565753256743047 0.86762001583673 1.0992498561412936 0.946158838523747 1.0 9.921107598880777 VT(ph)LELGGK ddPTM_A549_PD325901_60min_R1 2 VTLELGGK 8 0 P00352;P05091;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;O94788 P00352 ALDH1A1;ALDH2;ALDH1A3;ALDH1A2;ALDH1B1 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 1 VT(1)LELGGK;VT(1)LELGGK 107.21 0.0019565999999999997 7336900.0 2802.6000000000004 2447.0 2794.6000000000004 2606.5 2849.5 2523.8 2837.2 2871.2 2527.3 2897.1 2827.8999999999996 True False 3087.1178888349277 2653.217277747245 2984.258361294974 2767.4975852090015 2649.360950241336 2503.2470095632225 2945.1711985754114 2813.9316635871724 2421.0863699224915 2714.1766115778214 2480.0862275350814 1.2447623209871883 1.0698084801608838 1.2032881470661532 1.1158876471644188 1.0682535634555312 1.009338700312513 1.1875277423328021 1.1346104148902494 0.9762105619725855 1.0943880020959589 1.0 11.276174565707567 -7.546556622002263 0.33303116485752454 0.9752454140876606 1.1969042650208832 0.1762540643667443 0.07555432453560709 1.1922571830426127 0.2720725396459767 0.035747587382670684 0.09540120301819474 2.8408177835992054e-08 7.546556622002263 0.22165885093322257 VT(ph)QQEKTPPPRPSPLEAGSDGCEEPK ddPTM_A549_MK2206_60min_R1 1 VTQQEKTPPPRPSPLEAGSDGCEEPK 26 2 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 VT(0.568)QQEKT(0.325)PPPRPS(0.051)PLEAGS(0.056)DGCEEPK 57.262 0.00099006 20577000.0 2687.7 2901.4 2405.8 2301.3 3373.6 2680.8 2528.5 2977.9 3928.2 3608.0 4096.3 True False 3141.3180520438796 3049.0688671186176 2746.978615743482 2865.1186033092845 2877.347908980896 2964.4804766289813 2987.895720565867 3400.026444436271 3038.468972046397 2792.9502941351716 3079.0756578713535 1.0202146361728428 0.9902546107705972 0.8921439162175511 0.9305125698957384 0.9344843156501335 0.9627826029706607 0.9703872371331981 1.1042360832363565 0.9868120532468406 0.9070742665888282 1.0 11.588281601832016 -8.011465682355546 24.456394152746 1.003570201382273 0.9529892892186012 0.13331319670005937 0.052477115271731725 486.91427849363095 1038594.076830618 0.007095296986539819 0.00944409201599697 9.739447427164792e-09 8.011465682355546 -0.050580912163671776 VT(ph)RSPPETAAPVEDMAR ddPTM_A549_MK2206_60min_R1 1 VTRSPPETAAPVEDMAR 17 1 A0A3B3IU28;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;Q9Y3L3 A0A3B3IU28 SH3BP1 SH3 domain-binding protein 1 1 VT(0.601)RS(0.398)PPET(0.001)AAPVEDMAR 48.288000000000004 0.0089981 3489000.0 908.91 833.97 927.38 773.44 1111.2 1003.5 669.98 789.0 999.01 1102.3 1211.4 True False 1062.3117872839987 876.4155108261234 1058.8964289085495 962.9328347210413 947.7439519977389 1109.689703930611 791.7066936384102 900.8431662111608 772.7358300911546 853.289664419402 910.5759470608489 1.1666372153941929 0.9624848027833501 1.1628864482160424 1.0574986499799273 1.0408181273147623 1.218667929361038 0.8694570685661925 0.989311401337688 0.8486231517375199 0.9370878587048613 1.0 9.830635540726012 -7.776335944661592 24.9999657935796 0.9282007585932193 1.093212177469567 0.5510917490351375 0.07736996865348789 150.62044173715822 252776.12485191922 0.012691462731548355 0.017574544546229875 1.6736477397398787e-08 7.776335944661592 0.16501141887634763 VT(ph)RSQEELREDK ddPTM_A549_PD325901_60min_R1 1 VTRSQEELREDK 12 2 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 VT(0.514)RS(0.486)QEELREDK 106.6 0.00026932 57033000.0 7052.6 8277.4 7371.2 6962.2 8960.7 7854.8 7243.5 7647.8 7750.5 8525.4 9080.4 True False 7768.574760150287 8974.96554753783 7871.453958626457 7392.239281696568 8331.331344736813 7790.83311305064 7519.155356295294 7495.258629416963 7424.7734380897755 7987.104789046134 7963.568365398197 0.9755142925506662 1.1270030136909688 0.9884330236716523 0.9282571508792389 1.0461806771116011 0.9783093150680927 0.9441942369661969 0.941193480799883 0.9323425250356998 1.0029555122236664 1.0 12.959199312102323 -5.980144254117665 24.740488291439316 0.9676403066963561 1.052873565884486 0.29318346630718106 0.04680955842343728 168.91776082230444 210470.4982561359 0.0061629755800300026 0.01915814155622999 1.0467807943325528e-06 5.980144254117665 0.08523325918812996 VT(ph)SFRDLIHDQDEDEEEEEGQR ddPTM_A549_MK2206_60min_R1 4 VTSFRDLIHDQDEDEEEEEGQR 22 1 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;R4GNE6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.5)S(0.5)FRDLIHDQDEDEEEEEGQR;VT(0.5)S(0.5)FRDLIHDQDEDEEEEEGQR;VT(0.5)S(0.5)FRDLIHDQDEDEEEEEGQR;VT(0.5)S(0.5)FRDLIHDQDEDEEEEEGQR 95.366 4.978e-07 11464200.0 2065.17 2471.1299999999997 2920.23 1903.8899999999999 3206.57 2649.8 2472.69 2735.04 3869.95 3561.7 3510.5800000000004 True False 2413.7202074411075 2596.8999619503807 3334.3625251694198 2370.3431354688682 2734.8878007175936 2930.2000772051147 2921.945765982208 3122.7402957087106 2993.412504040261 2757.1094962919205 2638.8060989209816 0.9147016176853947 0.9841192814478728 1.2635875468579727 0.8982634746971788 1.0364110503745994 1.110426445657862 1.1072983980054476 1.18339134390572 1.1343813799976736 1.0448321676303969 1.0 11.365669629110805 -7.089673938035941 7.403948674030676 1.0813366047331645 1.0230507316020274 0.12043412167580936 0.09972428255386166 0.6565135684194713 47.72849632195048 0.015398196844297747 0.026790702506630605 8.134410066077913e-08 7.089673938035941 -0.05828587313113709 VT(ph)SFRDLIHDQDEDEEEEEGQR ddPTM_A549_PD325901_60min_R1 2 VTSFRDLIHDQDEDEEEEEGQR 22 1 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;R4GNE6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.548)S(0.452)FRDLIHDQDEDEEEEEGQR;VT(0.535)S(0.465)FRDLIHDQDEDEEEEEGQR 161.24 3.1661999999999994e-33 28985000.0 5402.9 5518.0 5778.9 6326.5 6448.4 6136.3 6557.5 6653.5 5865.200000000001 6685.5 7540.3 True False 5951.398430595239 5983.021225422686 6171.090905348717 6717.273536476022 5995.486629772324 6086.328007283781 6807.049250901685 6520.790722930223 5618.706040782416 6263.376389045431 6612.890901899922 0.8999692447497308 0.9047512372695774 0.9331910955276347 1.0157847204988835 0.9066362531475887 0.920373267542512 1.0293605855414885 0.9860726299078609 0.8496595700933353 0.9471464873624221 1.0 12.691065385149841 -5.795459585726274 4.735808975961796 0.9422666042723346 0.9016915886892893 0.09984090944484914 0.05101140762175306 0.46254464504638493 23.949067968695985 0.00895845229440002 0.03157872234670893 1.601549677305684e-06 5.795459585726274 -0.040575015583045215 VT(ph)SPEKAEEAK ddPTM_A549_PD325901_60min_R1 1 VTSPEKAEEAK 11 1 P56211;H3BMD8;P56211-2;H3BTD3 P56211;P56211-2 ARPP19 cAMP-regulated phosphoprotein 19 1 VT(0.774)S(0.226)PEKAEEAK 101.2 0.00010027 44067000.0 6962.0 7120.8 6163.3 6359.7 7260.7 6591.4 5853.4 6142.8 5877.5 7131.6 7344.7 True False 7668.777114846485 7720.894806449772 6581.5786009336925 6752.5242250733545 6750.733480055199 6537.7218237717025 6076.154340103381 6020.277035066621 5630.489114556821 6681.30955891353 6441.348461889361 1.1905546113859982 1.198645726454783 1.0217703078592957 1.048309102515581 1.048031094730604 1.0149616749431492 0.9433047095733644 0.9346299258122681 0.8741165220093216 1.0372532395109368 1.0 12.653147025119189 -5.797085888196526 0.5538498212985679 0.939821546913991 1.2984155256695893 0.6870505998397136 0.05253403301790679 0.9324845526960868 0.2704974891259994 0.010709880167413697 0.19083957669743043 1.5955635695932287e-06 5.797085888196526 0.3585939787555983 VT(ph)SPTKV ddPTM_A549_MK2206_60min_R1 1 VTSPTKV 7 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 VT(0.493)S(0.493)PT(0.013)KV 94.85 0.036834 117870000.0 7626.9 7886.3 6590.2 6743.0 10952.0 9241.5 8581.3 8785.9 11109.0 9521.2 10190.0 True False 8914.134260197738 8287.678984889217 7524.789456094729 8395.035302704768 9340.975308026676 10219.429395988776 10140.411131853623 10031.328230690287 8592.829237427686 7370.3543072394195 7659.541770307122 1.1637947187329343 1.082007153093299 0.9824072616543758 1.0960231766407817 1.219521426756595 1.3342089778275354 1.3238926604152492 1.3096512208573106 1.121846383910136 0.9622448089272438 1.0 12.903042370613921 -9.66484667415275 1.2672143891712015 1.0260487299494816 1.1828675604452537 0.3276432206102582 0.10736306641909979 0.4235911042690129 1.3865632401915353 0.03251698155054369 0.023191420242592888 2.163482197238502e-10 9.66484667415275 0.15681883049577205 VT(ph)SPTKV ddPTM_A549_PD325901_60min_R1 1 VTSPTKV 7 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 VT(0.463)S(0.463)PT(0.075)KV 77.732 0.0526 244670000.0 5694.9 5960.2 6640.7 5455.4 6670.0 5075.9 6392.0 5824.6 6307.5 6607.2 7823.7 True False 6273.042055636201 6462.486971323715 7091.377835773104 5792.367667887661 6201.52221025082 5034.56355330928 6635.251057836611 5708.423783689694 6042.417709922102 6190.020264408193 6861.434498520541 0.9142464388443542 0.9418565422022397 1.0335124291140787 0.8441919352486144 0.9038229850606296 0.7337479581558098 0.9670355461773046 0.8319577757275889 0.8806347581143514 0.9021466671062562 1.0 12.744294512306553 -10.681091651541486 0.9708825343540777 0.9992923881396655 0.8944298046500969 0.01951526840666451 0.07887481686488829 0.6727742957085708 1.1398986111734706 0.047813224835572814 0.0129736704297037 2.084051027991592e-11 10.681091651541486 -0.10486258348956856 VT(ph)SRGPDEEAVVDLGK ddPTM_A549_MK2206_60min_R1 1 VTSRGPDEEAVVDLGK 16 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-14;Q9Y6M7-8 Q9Y6M7-13 SLC4A7 Sodium bicarbonate cotransporter 3 1 VT(0.56)S(0.44)RGPDEEAVVDLGK 97.689 1.4679e-06 32290000.0 3303.1 3688.4 2884.9 2497.6 3845.2 3186.6 2286.9 3126.4 4041.5 3572.4 3217.5 True False 3860.58252695842 3876.123805569834 3294.022199916189 3109.512112121525 3279.5761737056378 3523.8038969061163 2702.4001278869227 3569.5767741984455 3126.1067029493197 2765.392358860448 2418.505951517486 1.5962675322490343 1.6026935154481505 1.3620070679790397 1.2857161298984892 1.35603394800326 1.4570168391337277 1.117384113192406 1.475942935744575 1.2925776349600673 1.1434300408172693 1.0 11.23990037266881 -12.679081283679448 0.07342604875824325 5.594103267817379e-13 1.9322384455849702 0.588035471522284 0.11872203820492053 47.1464645481558 0.42582831485281936 10.562211300000595 2.7864010264151156 2.0937205530187532e-13 12.679081283679448 1.9322384455844108 VT(ph)STQQQTR ddPTM_A549_MK2206_60min_R1 1 VTSTQQQTR 9 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;A0A1B0GV30;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VT(0.49)S(0.49)T(0.02)QQQTR 84.884 0.0013962999999999998 58907000.0 4964.9 4681.5 4127.0 4436.6 6803.1 4358.3 4335.9 5364.7 6647.8 6916.0 6584.1 True False 5802.853739849185 4919.768353696774 4712.270657233912 5523.56719916654 5802.373002012073 4819.4924131946 5123.676905201325 6125.16265370471 5142.083914355186 5353.670796629394 4949.086258084313 1.17251012353447 0.9940760975140314 0.9521496315681377 1.1160781831482154 1.1724129868486166 0.9738145915969797 1.03527734980004 1.2376350571177215 1.0389966240648183 1.0817493406756034 1.0 12.27294647195207 -8.988433168645555 21.415347786769104 1.017203932840948 1.077571866573185 0.028619452397176004 0.08781687346858047 22.836621572076712 42285.315894591 0.015266689041791294 0.015356111659401418 1.0269914579666187e-09 8.988433168645555 0.060367933732237145 VT(ph)VKYDR ddPTM_A549_MK2206_60min_R1 6 VTVKYDR 7 1 Q96A00-2;Q96A00;K7EJB8;K7EMN0;Q8TAE6;Q96C90 Q96A00-2;Q96C90 PPP1R14A;PPP1R14C;PPP1R14B Protein phosphatase 1 regulatory subunit 14A;Protein phosphatase 1 regulatory subunit 14C;Protein phosphatase 1 regulatory subunit 14B 1 VT(0.976)VKY(0.024)DR;VT(1)VKYDR;VT(0.997)VKY(0.003)DR;VT(1)VKYDR;VT(0.995)VKY(0.005)DR;VT(0.999)VKY(0.001)DR 92.428 0.010794 175411400.0 23092.6 29204.0 27774.299999999996 21523.4 35313.9 26987.500000000004 21274.6 25418.6 37079.399999999994 36188.50000000001 36227.1 True False 26990.066320135622 30690.35885963057 31713.11337901909 26796.633966222133 30119.272090040467 29843.29933714735 25139.9194371171 29021.76439119775 28680.97510363453 28013.492715995202 27230.911252904145 0.9911554582021989 1.1270411986803226 1.1645997845788918 0.9840520472249823 1.1060691950523058 1.0959346552886509 0.9232125654420014 1.0657654502143263 1.0532506546425522 1.0287387174018128 1.0 14.732957640963429 VT(ph)VKYDR ddPTM_A549_PD325901_60min_R1 3 VTVKYDR 7 1 Q96A00-2;Q96A00;K7EJB8;K7EMN0;Q8TAE6;Q96C90 Q96A00-2;Q96C90 PPP1R14A;PPP1R14C;PPP1R14B Protein phosphatase 1 regulatory subunit 14A;Protein phosphatase 1 regulatory subunit 14C;Protein phosphatase 1 regulatory subunit 14B 1 VT(1)VKYDR;VT(0.996)VKY(0.004)DR;VT(1)VKYDR 111.61 0.0080884 283555000.0 24829.699999999997 27858.2 30279.6 28712.1 27259.3 22164.5 26482.9 30512.3 25900.6 26987.5 28147.5 True False 27350.392865340964 30205.908282361397 32334.555742026485 30485.581207089745 25344.700807479785 21983.99966061655 27490.721251498933 29903.70824006371 24812.08785376271 25283.504644284436 24685.53594170365 1.1079521599178779 1.2236278099731939 1.3098583647681965 1.2349572348391886 1.0267024733565757 0.8905619757469745 1.1136367999633427 1.2113858216683275 1.0051265612526268 1.0242234442060698 1.0 14.59137834697177 -6.766097230174224 14.418474439932705 1.0198947747868214 1.2259126236091233 0.4882356169682708 0.08733993759955856 0.37033158312177933 1143.8019734666543 0.013007003668673548 0.025398956521152195 1.713573628412153e-07 6.766097230174224 0.2060178488223019 VTAAAMAGNKS(ph)TPR ddPTM_A549_MK2206_60min_R1 1 VTAAAMAGNKSTPR 14 1 P12270 P12270 TPR Nucleoprotein TPR 1 VTAAAMAGNKS(0.559)T(0.441)PR 50.07899999999999 0.0073831999999999995 5532800.0 1888.4 2717.9 2847.6 2569.9 3059.6 2332.0 2824.4 2230.8 3095.8 3489.9 3879.4 True False 2207.115753052672 2856.229500910491 3251.4324990402934 3199.5256153671958 2609.5368930276113 2578.7706921436834 3337.556920374231 2547.0227315384777 2394.6062429767417 2701.529166159187 2916.0379140068153 0.7568885652861623 0.9794898369431199 1.1150172236864455 1.0972167405638602 0.8948912771308749 0.8843405909631312 1.1445519635882315 0.8734532288843638 0.8211848794813527 0.9264382857241796 1.0 11.509793762212404 VTAAAMAGNKST(ph)PR ddPTM_A549_MK2206_60min_R1 1 VTAAAMAGNKSTPR 14 1 P12270 P12270 TPR Nucleoprotein TPR 1 VTAAAMAGNKS(0.414)T(0.585)PR 42.913000000000004 0.03013 4181900.0 2194.9 2425.3 2567.8 2626.7 3815.9 2263.0 2646.4 2693.6 3961.6 3364.8 3860.8 True False 2565.345459847124 2548.7374107061387 2931.952651719224 3270.2416179170427 3254.5861648921623 2502.4691579421756 3127.216624443548 3075.426048804035 3064.3039253752377 2604.68934304491 2902.056807340701 0.8839749288704922 0.8782520742733749 1.0103016055036902 1.1268702975231306 1.1214756915370314 0.8623088120164375 1.0775862886395984 1.0597401267352173 1.055907629934788 0.897532169755049 1.0 11.502860044889134 -5.799647727005701 4.883932841689593 1.0344014727895776 0.8794306177661585 0.3210761048134345 0.07909234931892833 0.12163583352788379 6.653106915393486 0.009141943275111744 0.0317542809106373 1.5861792819476235e-06 5.799647727005701 -0.15497085502341912 VTAEADSS(ph)SPTGILATSESK ddPTM_A549_MK2206_60min_R1 1 VTAEADSSSPTGILATSESK 20 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 VTAEADS(0.002)S(0.496)S(0.496)PT(0.006)GILATSESK 286.1 3.5622999999999994e-127 13695000.0 5245.9 6331.9 5270.7 5440.5 7626.7 5715.0 6239.8 6178.4 8663.1 9160.1 9053.3 True False 6131.279670058781 6654.166664268413 6018.164514921921 6773.422744233325 6504.8225330284 6319.75750669003 7373.490890720547 7054.207120556449 6700.92168212799 7090.827048034254 6805.11575163116 0.9009809522474527 0.9778182924623193 0.8843588756707614 0.9953427673305575 0.9558724304534012 0.9286774446379121 1.0835217444983432 1.0366035462167684 0.9846888615409378 1.0419847812779102 1.0 12.732403986124494 VTAEADSSS(ph)PTGILATSESK ddPTM_A549_MK2206_60min_R1 1 VTAEADSSSPTGILATSESK 20 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 VTAEADS(0.003)S(0.02)S(0.975)PT(0.002)GILATSESK 128.26 1.1142000000000002e-16 17316000.0 2383.5 3442.9 3053.0 2944.0 4198.3 3732.1 3144.6 3097.4 4467.9 4156.3 4256.0 True False 2785.776529019828 3618.128904185115 3485.961307616944 3665.28013216118 3580.735631454379 4127.028344832519 3715.9331156382927 3536.4659353896727 3455.9277837702025 3217.3889433242866 3199.1177403755746 0.8707952489090881 1.1309770998801527 1.089663335494396 1.1457159222063762 1.1192884795274847 1.2900520330170806 1.1615493449147152 1.1054503842595345 1.0802752709453196 1.0057113255689574 1.0 11.643458375061934 -9.649415904047817 0.9355153788850092 1.0135536638984968 1.120768535539579 0.1621739846193475 0.09332998252196723 0.6080335334389297 1.113381793537983 0.02953840099757044 0.018996968866571585 2.2417340888553489e-10 9.649415904047817 0.10721487164108212 VTAEADSSS(ph)PTGILATSESK ddPTM_A549_PD325901_60min_R1 2 VTAEADSSSPTGILATSESK 20 0 A0MZ66;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66-3;A0MZ66-8;A0MZ66-7 A0MZ66 KIAA1598 Shootin-1 1 VT(0.002)AEADS(0.022)S(0.108)S(0.475)PT(0.393)GILATSESK;VTAEADS(0.001)S(0.062)S(0.923)PT(0.014)GILATSESK 380.71 1.560099999999999e-284 29792200.0 9282.9 10188.9 8948.0 9476.2 11131.9 11141.1 10460.4 12385.1 10602.800000000001 12372.6 11855.8 True False 10225.293174290202 11047.554360947655 9555.265088695127 10061.523351988317 10350.03374697019 11050.37057541993 10858.476246150518 12138.069464577009 10157.201188230214 11591.39192447887 10397.611760108359 0.9834270994345762 1.0625088352820478 0.9189865239395654 0.9676763841664598 0.9954241402510615 1.0627796873331967 1.0443240713997728 1.1673901415655965 0.9768782892240209 1.1148129197274501 1.0 13.343964571615956 VTAEDKGT(ph)GNK ddPTM_A549_MK2206_60min_R1 2 VTAEDKGTGNK 11 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 1 VTAEDKGT(1)GNK;VT(0.005)AEDKGT(0.995)GNK 80.632 0.00033946 32816000.0 12519.0 11352.0 10099.900000000001 8525.7 9922.9 7070.6 8327.4 9405.5 11515.599999999999 17158.1 19794.2 True False 14631.901139836044 11929.768311687661 11532.217691058104 10614.49688273322 8463.254554786146 7818.8061989155785 9840.380788388458 10738.758428135716 8907.334986634463 13282.073293182022 14878.753847871767 0.9834090468489717 0.8017988894543124 0.7750795401933243 0.7133995891901592 0.5688147435812789 0.5255014148939608 0.6613713009168446 0.7217511989199129 0.5986613581827993 0.8926872121808688 1.0 13.860966079867671 -10.87641973188938 1.0886045081967275 1.0024823493622337 0.6932404080279444 0.35055949402168185 0.12312481124391896 0.39266357679203534 0.8152327350303161 0.0933333653043187 0.021780631818654517 1.3291691969994965e-11 10.87641973188938 -0.3092419413342893 VTAEDKGT(ph)GNK ddPTM_A549_PD325901_60min_R1 1 VTAEDKGTGNK 11 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 1 VTAEDKGT(1)GNK 68.168 0.001678 77560000.0 6893.9 6165.8 5458.0 6591.5 7825.9 6114.9 5706.5 5573.7 7621.8 7075.5 8874.4 True False 7593.763652979056 6685.413604876984 5828.4127016202565 6998.641984617356 7276.23578188934 6065.102281788633 5923.663980216622 5462.528181016935 7301.482251523462 6628.751722487617 7782.905059456604 0.9756978396842022 0.8589869147579906 0.7488736734027681 0.8992326041692709 0.9348997227003769 0.7792851429453379 0.761112198461047 0.7018623687795986 0.9381435589596213 0.8517066149269501 1.0 12.926093043033337 -8.962471621904658 12.884575148467869 0.9727379620861745 0.8313028195243447 0.16422944997571876 0.08714516955686491 0.8345870327572582 285.63308238569687 0.01435052342230843 0.015147303145465455 1.090255730615282e-09 8.962471621904658 -0.14143514256182976 VTAEDKGT(ph)GNKNK ddPTM_A549_MK2206_60min_R1 1 VTAEDKGTGNKNK 13 2 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 1 VT(0.014)AEDKGT(0.986)GNKNK 52.887 0.007989399999999999 39701000.0 3003.3 2694.1 2466.9 1567.8 2319.9 1444.7 1794.7 2180.9 2656.0 4767.7 5568.7 True False 3510.183616364693 2831.2181825685084 2816.743514497295 1951.911070381217 1978.6457831529478 1597.5771950857531 2120.7737590269176 2490.0492537261357 2054.42024076046 3690.673258688545 4185.838101698652 0.8385856144173918 0.6763802406546907 0.6729222311188372 0.46631308305715724 0.4727000268715589 0.3816624428062426 0.5066545115938162 0.5948747164195506 0.49080260412526633 0.8817047312916463 1.0 12.031300797308411 -10.747199593277202 0.8924108503518777 1.0128490411174156 0.5577192734369234 0.5629127674189518 0.12552484106680756 0.33719705257029653 0.4550346732679843 0.1034219764256508 0.023669980338050258 1.7897831155648565e-11 10.747199593277202 -0.4551297676804922 VTAEDKGT(ph)GNKNK ddPTM_A549_PD325901_60min_R1 5 VTAEDKGTGNKNK 13 2 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 1 VT(0.021)AEDKGT(0.979)GNKNK;VT(0.001)AEDKGT(0.999)GNKNK;VT(0.004)AEDKGT(0.996)GNKNK;VT(0.001)AEDKGT(0.999)GNKNK;VTAEDKGT(1)GNKNK 68.919 0.0012397 153674800.0 13935.8 11813.139999999998 8728.93 10032.88 13802.199999999999 12511.7 8732.41 12055.4 16544.300000000003 15473.0 20241.199999999997 True False 15350.552157006263 12808.674766018428 9321.327681120205 10652.588211276307 12832.781087005082 12409.808863440921 9064.726641108104 11814.945589721654 15849.000605353025 14496.032139361292 17751.66071953857 0.8647389334176774 0.7215479705468014 0.5250960926073006 0.6000896693316932 0.7229059460831478 0.6990787543489901 0.5106410484248896 0.6655684657558488 0.8928179090257533 0.8166014644143164 1.0 14.11566637880152 -8.849694484633535 3.0082298434329955 0.9559670118819188 0.6556463924627169 0.5035095306824122 0.10348426218500963 0.11266759858296156 1.9569505417562099 0.01807880417014148 0.019118195415095483 1.4135315792517998e-09 8.849694484633535 -0.30032061941920185 VTAPDVDLHLK ddPTM_A549_PD325901_60min_R1 1 VTAPDVDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 50.284 0.028793 1489800.0 539.68 550.29 457.75 567.21 479.38 684.1 576.6 660.01 683.69 629.8 639.25 False True 594.4679163085825 596.664869542923 488.81566767436254 602.2452734726256 445.71000257122006 678.5289164126325 598.5428285276267 646.8455827821712 654.9568868960193 590.0343205176598 560.6263025396238 1.0603639422832232 1.0642826903412226 0.8719099790003416 1.0742365649711205 0.7950215688278705 1.2103051771543945 1.0676324421744787 1.1537910009786843 1.1682592913123773 1.052455651554018 1.0 9.130895621717924 -7.2844741130912585 24.99104286932604 1.094693254431895 0.9782151460822683 0.323713650771667 0.0962905665426842 882.1451998780915 957062.5975969385 0.015108382639584453 0.02416179912916728 5.19428634068257e-08 7.2844741130912585 -0.11647810834962669 VTAQGPGLEPSGNIANK ddPTM_A549_PD325901_60min_R1 1 VTAQGPGLEPSGNIANK 17 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 0 132.47 1.0359000000000001e-11 2973200.0 1738.2 1852.1 1907.4 2395.0 2676.6 2386.6 2714.7 2890.0 2342.2 2368.3 2324.4 False True 1914.660784404792 2008.1829669455155 2036.8476341279734 2542.9337105603545 2488.604849768717 2367.1643208747078 2818.009394040841 2832.3566828388603 2243.7654792199023 2218.7651338233927 2038.5135355856096 0.9392435963662914 0.9851212326478956 0.9991827861681783 1.247445094756184 1.220793880602715 1.1612208011141245 1.382384440842726 1.3894225539322707 1.1006870643982893 1.0884230568456843 1.0 10.993301820913322 -6.076696846304788 8.174662244622862 1.1280352210456297 0.9694493127568873 0.28498451213181586 0.12679897445681115 0.44512181852145394 43.58986930867351 0.022101445416311004 0.058900016301530356 8.381141127977402e-07 6.076696846304788 -0.15858590828874242 VTASPGT(ph)LR ddPTM_A549_MK2206_60min_R1 1 VTASPGTLR 9 0 Q12872-2 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 VT(0.002)AS(0.237)PGT(0.76)LR 78.939 0.0018999000000000002 7092400.0 1421.5 1191.9 1053.8 1159.4 1794.7 1500.7 1024.0 1461.5 1934.1 1747.7 1966.1 True False 1661.414447661709 1252.5626189834845 1203.2446858718426 1443.4530520474448 1530.7020074247132 1659.5030779159617 1210.0475451293055 1668.6721006560358 1496.0294381230426 1352.893356169634 1477.863108400475 1.1242005015335255 0.8475498250573165 0.8141787145455859 0.976716343917487 1.0357535814541219 1.122907168115239 0.8187818873420337 1.1291114117207226 1.0122922952872335 0.9154388850222409 1.0 10.529296926285406 -6.512795606763269 23.667401846730073 1.0115591527921775 0.9163526617714373 0.08012616547566687 0.10942522821219466 336.10518787941663 788911.8219314467 0.013614874532189264 0.029807676571318234 3.070466710804441e-07 6.512795606763269 -0.09520649102074019 VTASPGT(ph)LR ddPTM_A549_PD325901_60min_R1 2 VTASPGTLR 9 0 Q12872-2 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 VT(0.006)AS(0.423)PGT(0.572)LR;VT(0.001)AS(0.291)PGT(0.708)LR 88.49600000000001 0.0037140999999999997 8463900.0 3201.0 2841.8 2982.3 2724.5 3843.6 3183.2 2999.8 3155.5 3511.6 3387.0 3574.2 True False 3525.963163548347 3081.2884592979676 3184.6968120267634 2892.7861772115593 3573.63879570016 3157.277074586598 3113.9590305535467 3092.5610770581384 3364.0196639179453 3173.1442419709642 3134.596058720569 1.12485407928048 0.9829937898140663 1.0159831609456702 0.9228577217034759 1.1400635771738934 1.0072357061136887 0.9934163676019405 0.9865899845227305 1.073190803822748 1.0122976557515768 1.0 11.614063826053636 -8.747512905851343 24.967452163288755 1.0345623307394127 1.019484461471614 0.0 0.061360848573876886 1211.4594901020948 2171917.9531226405 0.010234685682301273 0.011578336555844865 1.7884923800103008e-09 8.747512905851343 -0.015077869267798638 VTAVPTLLK ddPTM_A549_MK2206_60min_R1 1 VTAVPTLLK 9 0 I3L2R6;Q9BRA2 I3L2R6 TXNDC17 Thioredoxin domain-containing protein 17 0 73.26 0.0063098 1460800.0 1045.3 1247.2 1166.3 822.74 1702.1 1172.3 1047.0 919.75 1881.1 1551.9 1753.0 False True 1221.7210848686486 1310.6771527780863 1331.6988775216657 1024.3113369342025 1451.7233447582348 1296.3520078902395 1237.2263474124838 1050.1273791162428 1455.0338534994344 1201.3247121586405 1317.681719661275 0.9271746482016202 0.9946841738952034 1.0106377417636134 0.7773586911393999 1.101725343151468 0.9838126981252205 0.9389417254194942 0.796950707782597 1.1042377167328898 0.9116956653746813 1.0 10.363786220320284 VTAVPTLLK ddPTM_A549_PD325901_60min_R1 2 VTAVPTLLK 9 0 I3L2R6;Q9BRA2 I3L2R6 TXNDC17 Thioredoxin domain-containing protein 17 0 ; 98.03299999999999 0.0023433000000000004 4812300.0 3715.6000000000004 4236.700000000001 4256.1 4036.0 4643.9 4419.6 4338.8 4448.4 4222.3 4838.3 4959.8 False True 4092.8049767198486 4593.741577699941 4544.944540008421 4285.294553578951 4317.728484585275 4383.608242913712 4503.915408282459 4359.673172297709 4044.85141444377 4532.808912290556 4349.776042762651 0.9409231501768092 1.0560869186226751 1.0448686312414868 0.9851759059432528 0.9926323659281957 1.007777917717707 1.0354361613114018 1.0022753193354692 0.9298987751734419 1.0420786881275055 1.0 12.086725407390501 -8.548307204239734 23.587040165952523 0.966854012476924 1.0111770154151145 0.0 0.04026136156645236 128.70527249599505 119384.17540550887 0.006266345409620769 0.007105551759757017 2.829389879502427e-09 8.548307204239734 0.04432300293819047 VTDALNATR ddPTM_A549_MK2206_60min_R1 2 VTDALNATR 9 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 121.73 0.0003396 24740000.0 5477.5 6142.7 5887.700000000001 5683.3 8747.7 6188.1 5978.7 7026.0 10109.3 9351.3 8807.1 False True 6401.968087982425 6455.337192406957 6722.664392681397 7075.708755133031 7460.92491800812 6842.920634671667 7064.952400453686 8021.957016222585 7819.5596912348265 7238.834835240085 6620.054006405484 0.9670567765441125 0.9751185090273963 1.0154999319003484 1.0688294609510227 1.1270187389391415 1.0336653791722152 1.0672046472155248 1.2117660986542762 1.1811927340273531 1.0934706617553085 1.0 12.6926272712498 -6.13129898166237 1.866415156366438 1.0943704268897048 0.9682231241541434 0.4472611584216166 0.057144172192146694 0.35881786347596367 2.3608247391054453 0.011204098209739275 0.04321359883829742 7.390962832899496e-07 6.13129898166237 -0.1261473027355614 VTDALNATR ddPTM_A549_PD325901_60min_R1 2 VTDALNATR 9 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 153.24 4.8028e-05 47205000.0 14785.2 14176.400000000001 13336.4 14669.2 16527.8 15445.5 14606.2 15301.4 16501.199999999997 16072.5 17268.5 False True 16286.182619711024 15371.09498008012 14241.488302288091 15575.283167829624 15366.944345814629 15319.716968939209 15162.04693381933 14996.201573283925 15807.711948468741 15057.679607049988 15144.583974040654 1.075379993773826 1.0149565683961823 0.940368406732033 1.028439156501574 1.014682501160489 1.0115640677352875 1.0011530828320283 0.9902022795072436 1.043786476773793 0.9942616867429552 1.0 13.886514326990614 -8.746013181338963 24.991416455197992 1.0206769516607364 1.0080467371862813 0.0 0.03255684073599252 803.0561567916142 1300998.7601987158 0.005571917280309401 0.006305024896667377 1.7946791554213887e-09 8.746013181338963 -0.012630214474455004 VTDALPEPEPPGAMAAS(ph)EDEEEEEEALEAMQSR ddPTM_A549_MK2206_60min_R1 2 VTDALPEPEPPGAMAASEDEEEEEEALEAMQSR 33 0 Q9Y3E7-2;Q9Y3E7-4;Q9Y3E7;Q9Y3E7-3 Q9Y3E7-2 CHMP3 Charged multivesicular body protein 3 1 VT(0.001)DALPEPEPPGAMAAS(0.997)EDEEEEEEALEAMQS(0.002)R;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR 73.975 4.9855e-06 10844400.0 1516.6100000000001 1661.03 1985.97 1350.49 2948.91 1819.37 1766.94 1944.58 2277.33 2544.32 3549.19 True False 1772.5766904454624 1745.5693321672436 2267.6104088070824 1681.360110625799 2515.129245397456 2011.8945257999362 2087.970126358178 2220.2301700264898 1761.5183911487259 1969.5563448930159 2667.82817033919 0.6644268585784127 0.6543035085896519 0.8499836811149559 0.6302355336520903 0.9427628335889715 0.7541319745282329 0.7826479042286714 0.8322238271230968 0.6602818017791472 0.7382620690457005 1.0 11.38145003297519 -10.924763098631113 1.1083260058373512 1.0039676690922317 0.7494253206368838 0.0 0.11943852145371642 0.34187469653614716 0.7266063025109987 0.06887464475287193 0.015228949219549091 1.1891507150949661e-11 10.924763098631113 -0.25454234845534784 VTDALPEPEPPGAMAAS(ph)EDEEEEEEALEAMQSR ddPTM_A549_PD325901_60min_R1 6 VTDALPEPEPPGAMAASEDEEEEEEALEAMQSR 33 0 Q9Y3E7-2;Q9Y3E7-4;Q9Y3E7;Q9Y3E7-3 Q9Y3E7-2 CHMP3 Charged multivesicular body protein 3 1 VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VT(0.002)DALPEPEPPGAMAAS(0.998)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR 208.55 5.152799999999998e-101 186007000.0 6808.3 7804.26 7281.19 7192.029999999999 8410.14 8609.269999999999 7715.27 8936.300000000001 8012.220000000001 8143.499999999999 8842.509999999998 True False 7499.473603994441 8461.952379252847 7775.335338752361 7636.265358814766 7819.440779807921 8539.15895951437 8008.878821807741 8758.058486108273 7675.494256645589 7629.318020221592 7754.93732728924 0.9670579254849895 1.0911696667716007 1.0026303257656695 0.9846972369387341 1.0083177271196888 1.1011254635760233 1.0327457829510618 1.1293525810052778 0.989755807520959 0.9838013768821058 1.0 12.920899406610188 VTDAPNKS(ph)EISK ddPTM_A549_PD325901_60min_R1 2 VTDAPNKSEISK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VTDAPNKS(0.984)EIS(0.016)K;VTDAPNKS(0.993)EIS(0.007)K 96.993 7.1096e-05 84291000.0 8723.9 11101.599999999999 10278.6 10126.3 11468.599999999999 10725.4 11107.0 11936.6 10414.2 10616.0 10631.8 True False 9609.54390580426 12037.170793068592 10976.16760624293 10751.778552504089 10663.085100522125 10638.055898395038 11529.682962983616 11698.51514891845 9976.527390356045 9945.703948262102 9324.156000533074 1.030607371354026 1.2909662592925741 1.1771754575551299 1.1531101101149954 1.1435978870272552 1.1409135473266263 1.236539045713569 1.2546460128133454 1.0699657309236004 1.0666599687621585 1.0 13.186757426764292 -8.942073469351843 4.683626963919183 1.0296430584414273 1.1807618676876002 0.43969649441419256 0.06718604147491083 0.1172546711054487 4.928043826382714 0.011581293952369391 0.01208023768785464 1.1426850110610426e-09 8.942073469351843 0.15111880924617282 VTDKVLTANSNPS(ph)SPSAAK ddPTM_A549_PD325901_60min_R1 2 VTDKVLTANSNPSSPSAAK 19 1 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VTDKVLTANSNPS(0.5)S(0.5)PSAAK;VTDKVLTANSNPS(0.607)S(0.392)PS(0.001)AAK 148.89 1.7835e-21 32843000.0 5803.4 5173.8 5718.5 7055.5 7299.799999999999 8792.6 6577.6 7524.5 8175.400000000001 7002.8 7393.6 True False 6392.55689576272 5609.8142834526825 6106.591798134012 7491.302210796901 6787.087230942873 8720.995980777236 6827.914167400826 7374.41794464394 7831.816368719327 6560.642012894678 6484.234071891997 0.9858615258004517 0.8651467885421088 0.9417599257566908 1.1553102691450277 1.0467060805783819 1.3449539119170921 1.0530024196687504 1.1372843519962879 1.207824437225186 1.0117836494110994 1.0 12.662720455755446 -6.214696860919131 6.4815143451729 1.116674437375996 0.9225377129510697 0.4281186839294874 0.09699812209456972 0.17460858143166783 18.70402120705688 0.014405766037482025 0.038269759245705616 6.099625046657864e-07 6.214696860919131 -0.19413672442492635 VTDKVLTANSNPSS(ph)PSAAK ddPTM_A549_MK2206_60min_R1 2 VTDKVLTANSNPSSPSAAK 19 1 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VTDKVLTANSNPS(0.406)S(0.594)PSAAK;VTDKVLTANSNPS(0.498)S(0.501)PSAAK 148.04 2.0798000000000004e-21 17509700.0 3696.3 5573.5 5786.6 5227.2 6717.200000000001 5636.9 5305.0 4296.5 7820.8 8768.2 8635.3 True False 4320.145074141381 5857.167343656726 6607.226892452089 6507.864234657926 5729.108778221035 6233.393016528608 6268.849830967741 4905.542032479407 6049.401287251277 6787.457530220631 6490.916687844271 0.6655677898673145 0.9023636606868818 1.0179189181130048 1.0026109635400795 0.8826347731361434 0.9603255312461589 0.9657880592902384 0.7557548907793191 0.931979499687643 1.0456855104813934 1.0 12.664206523690298 -2.0000332423334677 0.017834355658414448 1.6449585650172862 6.091452930221327e-07 0.19389043716278764 0.09978982184547712 4763.936130163593 6.3742313509104385 223.72055393262926 384.7612947700222 0.009999234596278647 2.0000332423334677 -1.6449579558719931 VTEHGT(ph)PKPFR ddPTM_A549_MK2206_60min_R1 3 VTEHGTPKPFR 11 1 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 VT(0.001)EHGT(0.999)PKPFR;VT(0.026)EHGT(0.974)PKPFR;VT(0.002)EHGT(0.998)PKPFR 126.09 1.1041e-06 221418000.0 15661.1 16766.300000000003 15533.3 13983.9 20450.8 15927.5 16261.0 17310.9 23282.7 22820.6 25334.5 True False 18304.310802866545 17619.633055342565 17736.1555124816 17409.956127761114 17442.51441101094 17612.937478181164 19215.413214206674 19764.773087407837 18009.205624831895 17665.41061040497 19043.244453370553 0.9611970716275072 0.925243232500961 0.931362066790168 0.9142326650477695 0.9159423675792655 0.9248916339496849 1.0090409363413726 1.037888955099223 0.945700490739873 0.9276471062302772 1.0 14.216991675318642 -7.744471044876678 24.9521592211326 0.9818474418733047 0.9275175978039009 0.4550734522974187 0.030038708323329236 173.45353383954694 255065.0799925779 0.004618116361013796 0.00683988491520657 1.801063210268606e-08 7.744471044876678 -0.05432984406940389 VTEHGT(ph)PKPFR ddPTM_A549_PD325901_60min_R1 6 VTEHGTPKPFR 11 1 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 VTEHGT(1)PKPFR;VTEHGT(1)PKPFR;VTEHGT(1)PKPFR;VT(0.011)EHGT(0.989)PKPFR;VT(0.001)EHGT(0.999)PKPFR;VT(0.002)EHGT(0.998)PKPFR 138.02 1.3218000000000001e-08 343452000.0 25620.300000000003 25231.4 27280.0 26993.0 29517.4 27932.399999999998 28158.700000000004 27656.199999999997 27743.4 28405.899999999998 30895.4 True False 28221.25399533201 27357.738627606013 29131.384847966387 28660.29630444909 27444.1996535019 27704.927795357697 29230.294737531884 27104.57539513082 26577.441378272342 26612.346626218765 27095.46166207693 1.0415491105962866 1.0096797378394984 1.075138900059376 1.0577526473580008 1.0128707159809374 1.0224932920827026 1.0787893228054086 1.0003363564410732 0.9808816586974927 0.9821698909624287 1.0 14.725763608032123 -8.44869578362952 8.651114014052448 0.9909492961558721 1.0412242637352753 0.5679264895074684 0.021836843749016233 0.2129723143071716 23.35881440400885 0.003561865671433587 0.004303541889512561 3.5588051991648894e-09 8.44869578362952 0.050274967579403196 VTEHGT(ph)PKPFRK ddPTM_A549_MK2206_60min_R1 1 VTEHGTPKPFRK 12 2 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 VT(0.097)EHGT(0.903)PKPFRK 47.666000000000004 0.012073 2436800.0 1529.7 1593.8 1842.4 1799.6 2132.0 1967.6 1715.2 1614.2 2095.4 2728.1 2114.7 True False 1787.875962425689 1674.91761232979 2103.680023961173 2240.502080787114 1818.3856242433228 2175.8101260128265 2026.829638091587 1843.017793280172 1620.795245666215 2111.8203152522624 1589.5616272491138 1.1247603941721824 1.053697814301414 1.3234340763508423 1.4095094159164587 1.1439541525610495 1.3688114312235071 1.275087170793879 1.1594503551709965 1.019649202573639 1.3285551683245942 1.0 10.634413235458927 -8.633246997617793 2.851530460783765 1.0079781996511425 1.2454446453396075 0.0009235961191342845 0.1394687933771822 0.1544148475703534 2.513567853842072 0.018103118515749646 0.020492864847167048 2.326767571711197e-09 8.633246997617793 0.23746644568846498 VTEHGT(ph)PKPFRK ddPTM_A549_PD325901_60min_R1 1 VTEHGTPKPFRK 12 2 Q9NZN5-2;Q9NZN5;E9PMR6 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 VT(0.001)EHGT(0.999)PKPFRK 58.831 0.0038985 2422600.0 2354.2 2318.8 2479.9 2633.3 2181.9 3373.0 2410.9 2727.0 2765.0 2934.0 2911.0 True False 2593.1966509295594 2514.2134138293095 2648.20092685014 2795.952960341787 2028.6508711463675 3345.5314063145843 2502.6481187951 2672.607845709886 2648.7966655465093 2748.7467392804265 2552.965454349384 1.015758613776632 0.9848207736402957 1.03730386258792 1.0951785327053427 0.7946252730095651 1.3104491487007541 0.9802906320300729 1.0468640855114872 1.0375372142360413 1.076687792464053 1.0 11.31795830059904 -5.769867516620965 24.16357922461784 1.0282868685250477 1.0002896944169024 0.007813418574210917 0.11486149317618827 600.5769646496836 1721892.1555482082 0.013938797285627642 0.04445152763667179 1.6987617879373338e-06 5.769867516620965 -0.027997174108145284 VTENGGSPQGIKS(ph)PSKPPGPNR ddPTM_A549_MK2206_60min_R1 2 VTENGGSPQGIKSPSKPPGPNR 22 2 Q92766;Q92766-2;Q92766-5;Q92766-3;C9JU34;Q92766-6;C9JE09;C9JPJ6 Q92766 RREB1 Ras-responsive element-binding protein 1 1 VTENGGSPQGIKS(0.761)PS(0.239)KPPGPNR;VTENGGSPQGIKS(0.825)PS(0.175)KPPGPNR 110.62 4.2533e-11 65240000.0 9085.5 9760.6 9138.7 8712.7 14728.099999999999 11239.2 9708.4 10132.599999999999 15694.8 16197.5 15382.6 True False 10618.910280851533 10257.37284910663 10434.705077602022 10847.311891127965 12561.616000196085 12428.524684022845 11472.290612434908 11568.92707978607 12139.952859445504 12538.473500347687 11562.675881837728 0.918378270684848 0.8871106441043267 0.9024472521963982 0.9381316229893262 1.0863935068808304 1.074883081652852 0.9921830145265256 1.0005406359230533 1.0499258980799198 1.084392023825792 1.0 13.497187690425983 -6.5923093827513695 5.883151725836148 1.0273472635909204 0.9039535488522977 0.7683451887890704 0.03406629405324425 0.07374312620820711 4.604908139475922 0.004716232766353369 0.009947331312995638 2.556763850275061e-07 6.5923093827513695 -0.1233937147386227 VTENGGSPQGIKS(ph)PSKPPGPNR ddPTM_A549_PD325901_60min_R1 2 VTENGGSPQGIKSPSKPPGPNR 22 2 Q92766;Q92766-2;Q92766-5;Q92766-3;C9JU34;Q92766-6;C9JE09;C9JPJ6 Q92766 RREB1 Ras-responsive element-binding protein 1 1 VTENGGSPQGIKS(0.987)PS(0.013)KPPGPNR;VTENGGSPQGIKS(0.989)PS(0.011)KPPGPNR 154.14 3.5204999999999995e-33 122407000.0 7211.3 6944.9 7431.6 6655.799999999999 8499.599999999999 8222.4 8300.599999999999 8502.8 8432.3 8029.400000000001 9150.0 True False 7943.385867321518 7530.171096128669 7935.953065841164 7066.913649581457 7902.617418028165 8155.4395005280285 8616.483875262604 8333.204983682443 8077.9197551131365 7522.422313694026 8024.608006628954 0.9898783667388688 0.9383849142423104 0.988952115702779 0.8806553097352087 0.9847979379802708 1.0163037862772857 1.0737576051247255 1.0384563304274257 1.0066435330473642 0.9374192867090725 1.0 12.970215204535043 -6.995536450005622 24.996785501616625 1.012369050579195 0.9491501472822426 0.33954397876244724 0.040808023469986375 94.86572654350353 531259.4631174093 0.004937813734710186 0.009308325626472061 1.0103307006822333e-07 6.995536450005622 -0.06321890329695234 VTENLASLT(ph)PK ddPTM_A549_MK2206_60min_R1 3 VTENLASLTPK 11 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 VTENLAS(0.004)LT(0.996)PK;VTENLAS(0.001)LT(0.999)PK;VTENLAS(0.001)LT(0.999)PK 141.38 3.3593000000000004e-11 9493700.0 6853.3 8631.8 7125.1 7164.799999999999 11099.6 8136.700000000001 7993.200000000001 8616.4 12506.6 11048.2 11969.0 True False 8009.9694929018615 9071.121750601264 8135.546319325749 8920.17632164009 9466.863543551213 8997.720193295669 9445.460974343321 9837.801086618307 9673.875068936279 8552.403946691858 8996.766972404906 0.8903164345003296 1.0082646108790436 0.9042744292787939 0.9914868695610616 1.0522517224896675 1.0001059514927624 1.0498728046769088 1.0934818159448878 1.0752612686988796 0.9506085878320503 1.0 13.135190940455336 -6.534457919582928 4.1589621226958915 1.0399187901063738 0.9417172908970416 0.4448024821369527 0.0467876201361028 0.12601195645856478 5.095174883638624 0.005987822908364097 0.013484216592163393 2.921070779971271e-07 6.534457919582928 -0.09820149920933219 VTENLASLT(ph)PK ddPTM_A549_PD325901_60min_R1 2 VTENLASLTPK 11 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 VTENLAS(0.081)LT(0.919)PK;VTENLAS(0.073)LT(0.927)PK 153.39 2.0412e-12 21300700.0 11232.7 12180.3 11397.3 11237.400000000001 12661.9 12402.2 11868.400000000001 12579.9 12197.5 13388.400000000001 13768.099999999999 True False 12373.035434923315 13206.776627766572 12170.789315532527 11931.508676012909 11772.571825183644 12301.20059513631 12320.058456637673 12328.984025759366 11684.881492948845 12543.05413912137 12074.710983176832 1.0247065500915198 1.093755092454552 1.0079569881622472 0.9881403118167018 0.9749775246451741 1.0187573526418177 1.020319117683452 1.0210583129432085 0.9677152115051765 1.0387871110618763 1.0 13.55970103708854 -5.921824808052786 6.368516058132959 0.9917040995727041 1.0586756585872248 0.32325602441917645 0.02690727418719198 0.11426019304513269 7.373585076199701 0.0033415543561776204 0.010595779697730116 1.1972233870793176e-06 5.921824808052786 0.06697155901452068 VTFFEPGS(ph)GDENGTSNKEDEFR ddPTM_A549_MK2206_60min_R1 4 VTFFEPGSGDENGTSNKEDEFR 22 1 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 VTFFEPGS(1)GDENGTSNKEDEFR;VT(0.001)FFEPGS(0.998)GDENGT(0.001)S(0.001)NKEDEFR;VT(0.001)FFEPGS(0.991)GDENGT(0.004)S(0.004)NKEDEFR;VTFFEPGS(0.998)GDENGT(0.001)S(0.001)NKEDEFR 102.07 2.1915000000000001e-10 36408400.0 5051.25 5814.1 5164.0 4862.77 7840.299999999999 5524.91 5559.900000000001 5303.42 7454.3 7437.8 8123.5 True False 5903.77750879438 6110.012855971038 5896.332850486049 6054.14886829804 6687.002255982608 6109.552309061556 6570.061861488694 6055.196026042583 5765.912952071045 5757.595814223553 6106.210752805681 0.9668479762316937 1.0006226616340765 0.9656287817738362 0.9914739456898503 1.095114880027694 1.0005472389328094 1.075963822321377 0.9916454362896567 0.9442702169134473 0.9429081385011242 1.0 12.576061668962831 -8.518881575475264 24.972232793826915 0.9733818232086213 1.0146283815667798 0.22124724659366724 0.04083143366534371 228.12860595971276 1425235.493791359 0.0071260020090778324 0.008168926018357904 3.0277389271037567e-09 8.518881575475264 0.04124655835815849 VTFFEPGS(ph)GDENGTSNKEDEFR ddPTM_A549_PD325901_60min_R1 2 VTFFEPGSGDENGTSNKEDEFR 22 1 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR 120.0 1.1145999999999998e-15 89654000.0 3600.7 3583.8 3422.6 3391.2 3934.8 3348.3 3922.0 3411.8 4055.9 4053.1 4029.9 True False 3966.24041330476 3885.8194033471937 3654.878217765754 3600.666722025998 3658.4332223230776 3321.0325549253284 4071.2538562007517 3343.74897249468 3885.4446277721854 3797.1865742936247 3534.2478476408764 1.1222304106239296 1.0994756369282344 1.0341318366241345 1.018792930560729 1.0351377096445273 0.9396716637012682 1.151943505863158 0.9460991748857243 1.09936959581534 1.0743973648673963 1.0 11.787187500563054 -7.04124061704308 0.004825534652158016 8.018519454525762e-08 2.1110275933953737 0.032263991021107885 0.06493555924631414 30283.654454464027 43.29159694861129 9304.06888872341 9634.897210193345 9.094092828042191e-08 7.04124061704308 2.1110275132101792 VTFQT(ph)PLRDPQTHR ddPTM_A549_MK2206_60min_R1 5 VTFQTPLRDPQTHR 14 1 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 VTFQT(1)PLRDPQTHR;VTFQT(1)PLRDPQTHR;VTFQT(1)PLRDPQTHR;VTFQT(1)PLRDPQTHR;VT(0.01)FQT(0.988)PLRDPQT(0.002)HR 124.46 5.1359e-07 37366600.0 4369.25 4341.51 5307.09 3548.5699999999997 6270.65 4799.34 4343.3 4530.360000000001 6331.360000000001 6611.17 6529.42 True False 5106.672582093511 4562.474314911475 6059.715164114253 4417.969809301358 5348.245691679827 5307.202973255943 5132.421389414174 5172.552403645624 4897.317069104347 5117.7021053430235 4907.984811175537 1.0404825561940532 0.9296023705131827 1.234664612310171 0.9001596335916913 1.0897029834937164 1.0813405455476108 1.0457288656899655 1.0539055442607856 0.9978264516942066 1.0427298172744865 1.0 12.260915068936818 -8.765913288304219 23.683134798265208 0.9989735952685797 1.0469320131117876 0.023308874682893443 0.08288757957632706 116.23195080466749 615284.269121229 0.012708500312935885 0.013764394463809084 1.7142995522033017e-09 8.765913288304219 0.04795841784320798 VTFQT(ph)PLRDPQTHR ddPTM_A549_PD325901_60min_R1 3 VTFQTPLRDPQTHR 14 1 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 VTFQT(1)PLRDPQTHR;VTFQT(1)PLRDPQTHR;VT(0.284)FQT(0.716)PLRDPQTHR 129.82 5.7838e-09 75359000.0 4624.29 4078.62 4003.1899999999996 4635.68 4833.67 5313.6900000000005 4690.27 5173.6900000000005 4886.72 5301.09 5305.7 True False 5093.74451657763 4422.339621318134 4274.870546537045 4922.015425206852 4494.169694456236 5270.417070388303 4868.760791464225 5070.496694268714 4681.348152426562 4966.378272710321 4653.132535603409 1.0946914745288 0.9504005285644961 0.9187080990768915 1.057785349449234 0.9658374568248658 1.1326599941140179 1.0463404500540092 1.0896953085844527 1.0060637896314495 1.0673193240704222 1.0 12.183986564758461 -5.222101558929499 21.841018817184366 1.0125696365192458 1.0946926259348444 0.0759330364980576 0.06150515682816827 5901.316116630686 3276168.940928106 0.00792711938072906 2.2841376843060934 5.996508326641372e-06 5.222101558929499 0.08212298941559859 VTFSVS(ph)PIEATEK ddPTM_A549_MK2206_60min_R1 1 VTFSVSPIEATEK 13 0 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTFS(0.159)VS(0.84)PIEATEK 234.85 2.2955999999999996e-56 39286000.0 6758.4 7243.0 7258.1 6354.0 9690.6 7695.4 7581.3 7382.1 11771.0 11465.0 11086.0 True False 7899.052692984097 7611.637762645672 8287.407719231758 7910.7302852419 8265.125577060193 8509.7221202069 8958.724076063281 8428.535281733099 9104.887294424456 8875.048537211691 8333.040241965144 0.9479196624065863 0.9134286576840837 0.9945239046724411 0.9493210227647175 0.9918499535664147 1.0212025711038797 1.0750847008931024 1.011459807824645 1.0926249040022986 1.0650432830645646 1.0 13.02462723184772 -7.070158495826145 1.5824277281701897 1.0442650761837602 0.948613618977519 0.6731370935856824 0.03061656043060409 0.21634096060352503 1.0682070979743896 0.005922917035619123 0.012518716878793336 8.508274719416403e-08 7.070158495826145 -0.09565145720624124 VTFSVS(ph)PIEATEK ddPTM_A549_PD325901_60min_R1 2 VTFSVSPIEATEK 13 0 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTFS(0.003)VS(0.997)PIEATEK;VTFS(0.037)VS(0.963)PIEATEK 336.95 1.5150999999999993e-178 149831000.0 46948.0 46818.0 47956.0 48588.0 59572.0 51105.0 46368.0 54196.0 55077.0 54308.0 59946.0 True False 51714.126398709064 50763.517167785314 51210.582542854696 51589.17040864567 55387.868232243185 50688.81782380873 48132.55961354319 53115.01826406048 52762.30522542682 50878.98361173873 52573.02202900314 0.9836628065660702 0.9655811138226071 0.9740848170113404 0.9812859983621502 1.0535416473050982 0.964160245455265 0.9155372424090389 1.0103093985116232 1.003600386455229 0.9677774198270388 1.0 15.682035046567776 VTGPPPGT(ph)PQPR ddPTM_A549_MK2206_60min_R1 3 VTGPPPGTPQPR 12 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16;M0QZM0 F5GYK2 STRN4 Striatin-4 1 VT(0.001)GPPPGT(0.999)PQPR;VTGPPPGT(1)PQPR;VTGPPPGT(1)PQPR 127.79 9.693899999999999e-08 35339100.0 7933.199999999999 8871.8 6375.5 6714.3 10056.8 7774.1 6563.599999999999 6860.0 10068.5 10375.900000000001 12700.2 True False 9272.130211881728 9323.336725478379 7279.641767675024 8359.303801416378 8577.4580421624 8596.750101970074 7756.12115938546 7832.426007868903 7788.000826090621 8031.976983624485 9546.389832311539 0.9712708547160385 0.9766348210421708 0.7625544206288033 0.8756507903252341 0.8985028050216838 0.9005236799436754 0.8124664187851851 0.8204594768756033 0.8158058661852124 0.8413627690374386 1.0 13.220739535535687 -10.908452437245574 1.181180461039342 0.9994420419102932 0.8648170448299706 0.0 0.07806183737668718 0.4182034367387767 1.0432723755350022 0.04521792192360108 0.010936712524881499 1.2346605244405506e-11 10.908452437245574 -0.1346249970803226 VTGPPPGT(ph)PQPR ddPTM_A549_PD325901_60min_R1 2 VTGPPPGTPQPR 12 0 F5GYK2;Q9NRL3;Q9NRL3-3;R4GN16;M0QZM0 F5GYK2 STRN4 Striatin-4 1 VTGPPPGT(1)PQPR;VTGPPPGT(1)PQPR 134.49 4.6086e-08 28381000.0 10208.400000000001 10076.0 7685.7 8389.8 10311.6 9367.9 8411.1 9129.0 10667.900000000001 11664.599999999999 14810.6 True False 11244.749252973124 10925.139881725081 8207.297819868594 8908.018891381727 9587.348789088814 9291.610928317345 8731.189013230529 8946.91493343804 10219.565261621558 10928.095165306913 12988.990092128823 0.8657138987108253 0.8411077230973938 0.6318657387260709 0.6858130484509248 0.7381134885073656 0.7153451394152617 0.6721992203629078 0.6888075878092914 0.7867867470169598 0.8413352452958766 1.0 13.66500164361336 -10.087372008344214 0.7251307118198098 0.992170639831537 0.7277587818091114 0.4020506374691426 0.08036645727923081 0.2958053448270444 0.30634591042415726 0.03946433726954915 0.015415199144015056 8.177640070369476e-11 10.087372008344214 -0.2644118580224256 VTGS(ph)LETK ddPTM_A549_MK2206_60min_R1 2 VTGSLETK 8 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 VT(0.002)GS(0.927)LET(0.071)K;VTGS(0.764)LET(0.236)K 114.4 0.0013273 43587000.0 6618.3 7811.1 6334.3 6607.0 8022.0 6198.2 6312.700000000001 7300.5 9313.7 10200.400000000001 9815.5 True False 7735.307238100242 8208.651626094379 7232.598988155264 8225.715296599505 6841.974426679144 6854.089409967827 7459.635877087665 8335.368231843579 7204.161820922695 7896.122555514531 7378.040455981314 1.04842299039297 1.1125788310688505 0.9802872498878558 1.1148915956310579 0.9273430347122066 0.9289850673577258 1.0110592265782714 1.1297536631269305 0.9764329517985149 1.0702194712300896 1.0 12.849021984440766 -6.755126044948583 24.99983244125179 0.9930195012374606 1.061529136643953 0.13627361422977247 0.064628169227315 178.5820457906861 707150.2334513732 0.008516140018671365 0.01738991546150076 1.757413487190428e-07 6.755126044948583 0.06850963540649235 VTGS(ph)LETK ddPTM_A549_PD325901_60min_R1 1 VTGSLETK 8 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 VTGS(0.994)LET(0.006)K 88.49600000000001 0.0039384 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VTGSLET(ph)K ddPTM_A549_PD325901_60min_R1 2 VTGSLETK 8 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 1 VTGS(0.049)LET(0.951)K;VTGS(0.287)LET(0.713)K 125.57 0.0011595999999999998 57110000.0 10439.5 9853.3 9569.3 10375.5 11096.5 10216.400000000001 9997.400000000001 10049.2 10490.0 11233.4 10971.5 True False 11499.310354846288 10683.672171159353 10218.730242875543 11016.371070529827 10317.120120846814 10133.201025636623 10377.856527787199 9848.760822555112 10049.141779957641 10524.121206895965 9622.075054068797 1.1950967218847126 1.1103293324075296 1.062008993429587 1.1449059593306163 1.0722344258252392 1.0531201397511123 1.0785466200867775 1.023558927488355 1.0443840568161287 1.093747569807796 1.0 13.232132337429816 -2.0000000000000098 0.16305764109692344 0.99268503053258 1.6560568122503796 0.47806250175768994 0.038061422558699445 19.863631872442003 0.1964378933400993 0.03745167032760251 3.2110239389406288 0.009999999999999775 2.0000000000000098 0.6633717817177996 VTGSLETK ddPTM_A549_MK2206_60min_R1 2 VTGSLETK 8 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 ; 109.71 0.0045727 8474500.0 4938.5 5334.2 4877.7 4691.6 6166.9 4518.1 4520.8 4315.5 7126.8 6271.7 5777.8 False True 5771.998065267218 5605.687995789664 5569.431205425211 5841.042210613929 5259.7571792430335 4996.202343127947 5342.170841816955 4927.235340664468 5512.591179161009 4854.918614115181 4343.012800832238 1.3290308663518442 1.2907371570987456 1.2823888532766836 1.344928619481533 1.2110848897878272 1.1504000960279326 1.2300610398369656 1.1345201054254956 1.2693011584273128 1.1178688244218042 1.0 12.084480489738022 -14.815688487332137 0.18698484697279474 9.274885263062932e-13 1.3055309590064876 0.5911488366840995 0.06384265512060333 18.34765128807896 0.22143711906682756 6.777072437568099 0.062540648253919 1.5286621506382728e-15 14.815688487332137 1.3055309590055602 VTGSLETK ddPTM_A549_PD325901_60min_R1 2 VTGSLETK 8 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 ; 112.84 0.0038978000000000003 14146900.0 5302.700000000001 5036.700000000001 5818.4 5261.1 7035.2 5724.700000000001 6062.5 6079.9 5978.1 6039.7 6961.299999999999 False True 5841.02620035858 5461.160385300188 6213.271612881512 5586.066198174978 6541.071822122429 5678.079941218234 6293.21175502729 5958.631624910718 5726.861246402743 5658.352311258346 6105.104231316515 0.9567447137751833 0.8945236933526578 1.017717532324861 0.9149829366582967 1.0714103435891544 0.9300545455214616 1.0308115171475476 0.9760081726935214 0.9380447948826899 0.9268232116715507 1.0 12.575800210950897 -5.75501613402233 24.999612288165093 0.9771838162443158 0.9256342143875395 0.14878515766788836 0.04862978718401956 198.23279215507134 771510.5712228997 0.005915642631650568 0.021850338674120687 1.757858308381028e-06 5.75501613402233 -0.05154960185677637 VTGTEGSSSTLVDYTSTSSTGGS(ph)PVRK ddPTM_A549_MK2206_60min_R1 4 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDYT(0.026)S(0.176)T(0.098)S(0.195)S(0.14)T(0.1)GGS(0.265)PVRK;VTGTEGSSSTLVDYT(0.002)S(0.011)T(0.008)S(0.011)S(0.06)T(0.041)GGS(0.867)PVRK;VTGTEGSSSTLVDYT(0.002)S(0.009)T(0.034)S(0.181)S(0.126)T(0.134)GGS(0.514)PVRK;VTGTEGSSSTLVDYTSTS(0.001)S(0.001)T(0.004)GGS(0.994)PVRK 212.24 1.6554e-81 123853000.0 10791.0 12061.7 11413.4 9357.2 13490.0 11682.0 12607.900000000001 11476.7 16413.2 15465.9 14689.3 True False 12612.25698537988 12675.589010313872 13031.991742009573 11649.714420060673 11505.638870094943 12918.181486115995 14898.59223069899 13103.55737091968 12695.63640649456 11972.142448465958 11041.541405944301 1.1422551002335573 1.1479908958625893 1.180269245287954 1.055080444999188 1.0420319452772049 1.1699617844263475 1.349321773378327 1.186750734264808 1.149806529698812 1.0842818052577932 1.0 13.4306539668362 -10.394392355023333 0.8937688686283833 1.0057583213818286 1.1574061655217014 0.22216066701080261 0.07893109950404023 0.49902121253099413 0.7557493766738862 0.0446168652677081 0.015506701735158463 4.0328089195158195e-11 10.394392355023333 0.15164784413987276 VTGTEGSSSTLVDYTSTSSTGGS(ph)PVRK ddPTM_A549_PD325901_60min_R1 2 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDYTSTSST(0.012)GGS(0.987)PVRK;VTGTEGSSSTLVDYTST(0.008)S(0.036)S(0.015)T(0.323)GGS(0.618)PVRK 268.96 1.3330999999999997e-138 174921000.0 8127.7 6483.1 8855.0 8166.0 7889.7 6811.6 7549.0 7596.299999999999 9276.0 9257.099999999999 8228.9 True False 8952.818120703494 7029.45358944143 9455.953549440697 8670.395273668406 7335.554689987393 6756.12858797878 7836.281325971303 7444.785837317932 8886.161978158925 8672.605126173434 7216.797467294969 1.2405527744509683 0.9740405798136165 1.3102700459993675 1.2014186781547966 1.0164556679372823 0.9361671321103516 1.0858391636295333 1.0315913493562983 1.231316524875358 1.2017248877325273 1.0 12.817143052100066 -11.192393722505496 1.624219780797109 1.0000844324213947 1.126054820538325 0.0 0.12929693557353922 0.657803817303001 3.1241267894810565 0.0871718336885225 0.018316735287659536 6.421053337897605e-12 11.192393722505496 0.1259703881169303 VTIMPK ddPTM_A549_MK2206_60min_R1 1 VTIMPK 6 0 K7EK07;P84243;Q6NXT2;P68431;Q71DI3;Q16695;Q5TEC6;A0A590UJL8 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 58.246 0.042572000000000006 10966000.0 10721.0 11519.0 12363.0 10319.0 13762.0 10384.0 10595.0 10283.0 15652.0 16580.0 16235.0 False True 12530.442696715578 12105.267898372982 14116.259301037771 12847.155463237521 11737.62803041116 11482.827987658664 12519.97435609862 11740.646740366756 12106.846991107945 12834.566484689898 12203.40143679452 1.0267991888667198 0.9919585093607053 1.156747925908246 1.0527520158848511 0.961832493276915 0.9409530651869525 1.025941367326457 0.9620798595519023 0.9920879071145317 1.051720420012764 1.0 13.574995703734196 -6.691736416370935 7.6096325675627705 0.9896299772096068 1.060094284788151 0.31539777462536833 0.04701466018384478 0.19577390600510594 18.33368475292697 0.005970112280571784 0.012446155338497798 2.033590871035855e-07 6.691736416370935 0.07046430757854416 VTIMPK ddPTM_A549_PD325901_60min_R1 2 VTIMPK 6 0 K7EK07;P84243;Q6NXT2;P68431;Q71DI3;Q16695;Q5TEC6;A0A590UJL8 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 ; 74.717 0.028047000000000002 55445000.0 25242.0 25469.0 27697.0 27816.0 36011.0 30873.0 31934.0 30857.0 33643.0 31269.0 32245.0 False True 27804.549257821738 27615.362013463277 29576.684975591088 29534.13114528049 33481.71159120576 30621.580523910525 33149.26584495532 30241.532928151788 32229.101706684 29294.670003599076 28279.069417896215 0.9832200928162728 0.9765300832702467 1.0458860770317175 1.0443812951847 1.183975013336793 1.0828355088845982 1.1722191192040088 1.0693963256447767 1.1396804198333357 1.035913507997549 1.0 14.78744702557103 -5.975030953966287 2.0435170651148282 1.0837873654207857 0.9769402988385241 0.38335252623675253 0.05394405028701106 0.3453456680974857 2.76315514366556 0.009315647319784385 0.04033598060334396 1.059178230468007e-06 5.975030953966287 -0.10684706658226162 VTKNEEPS(ph)EEEIDAPKPK ddPTM_A549_MK2206_60min_R1 6 VTKNEEPSEEEIDAPKPK 18 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 VTKNEEPS(1)EEEIDAPKPK;VT(0.001)KNEEPS(0.999)EEEIDAPKPK;VT(0.001)KNEEPS(0.999)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VT(0.012)KNEEPS(0.988)EEEIDAPKPK;VT(0.021)KNEEPS(0.979)EEEIDAPKPK 200.95 2.0361999999999998e-49 2519493500.0 53889.399999999994 58334.80000000001 56024.5 51075.13999999999 70601.6 51119.13 52835.0 51114.3 74315.79999999999 74742.8 80319.9 True False 62984.61325066547 61303.792151923626 63969.61653409289 63588.55159285013 60216.19816537395 56528.52240646777 62434.43559268247 58359.908555978676 57483.38995794651 57858.34956887103 60374.25211353199 1.0432363308157386 1.0153962990157404 1.0595512870917212 1.053239574268742 0.9973820967941628 0.9363018244957727 1.0341235445082841 0.9666357182567595 0.9521176320304672 0.9583282201172467 1.0 15.881645792213696 -6.8974133680062435 4.830995186054594 0.9777368587472574 1.0417436044706285 0.5890623940854013 0.026525601492005675 0.12523149643092768 4.889796325008544 0.004004755191707543 0.007716629423608625 1.2664458698192253e-07 6.8974133680062435 0.06400674572337117 VTKNEEPS(ph)EEEIDAPKPK ddPTM_A549_PD325901_60min_R1 4 VTKNEEPSEEEIDAPKPK 18 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 VT(0.001)KNEEPS(0.999)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VT(0.001)KNEEPS(0.999)EEEIDAPKPK 211.68 3.9130999999999997e-56 3597920000.0 84239.3 87309.59999999999 92300.8 85988.3 103296.1 96128.8 98481.0 102875.2 90653.2 93727.4 97416.59999999999 True False 92791.21172230494 94667.48640506789 98564.88733779972 91299.60199740154 96040.9382881995 95345.95892420197 102228.74834587098 100823.27343196701 86843.36125899496 87809.43596838192 85434.9757747071 1.0861033304088048 1.1080647655909333 1.1536830957583033 1.0686443247571056 1.124140756374303 1.1160061562565458 1.1965678859141862 1.1801170716995228 1.0164848818825887 1.02779260100613 1.0 16.38253918764653 -8.823071316450058 8.266905951355358 1.0075287103797692 1.1288344838177904 0.6631342392987374 0.036224661512045606 0.10659749254001825 12.829545523666702 0.006456522146229081 0.0068686854514118335 1.502895152114179e-09 8.823071316450058 0.12130577343802118 VTKNEEPSEEEIDAPKPK ddPTM_A549_PD325901_60min_R1 2 VTKNEEPSEEEIDAPKPK 18 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ; 110.22 8.5773e-10 6351900.0 2603.9 2939.8 2980.3999999999996 3348.1 3429.0 3880.6 3018.6 3515.2 3923.2 3375.6 3707.7 False True 2868.246011110136 3187.547263228996 3182.667866601138 3554.904532913199 3188.1588694078055 3848.99768020883 3133.4744748413023 3445.0865783789477 3758.321547295504 3162.464039916501 3251.676405046793 0.8820822412274633 0.9802781292387321 0.9787775504541135 1.093252861015253 0.9804662187355406 1.1836964078697865 0.9636489258211443 1.059480141699208 1.1558104433338963 0.9725641933521338 1.0 11.666967977480002 -5.10637342824353 0.745542371404477 1.070749122384615 0.7362619204407327 0.3031227500479412 0.07197472986601941 2.580354156204218 0.8642420976465116 0.011675251262961176 0.7588479843526499 7.827563000759251e-06 5.10637342824353 -0.3344872019438824 VTKS(ph)PAPVHR ddPTM_A549_MK2206_60min_R1 3 VTKSPAPVHR 10 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B0QYZ7 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 VT(0.202)KS(0.798)PAPVHR;VT(0.137)KS(0.863)PAPVHR;VT(0.065)KS(0.935)PAPVHR 72.937 0.00079772 190550000.0 5553.4 5711.4 5051.1 5186.5 5790.5 4951.1 4504.8 4784.77 6852.8 6889.4 7878.7 True False 6490.678152405583 6002.085864638202 5767.421932821469 6457.192732830834 4938.725120628964 5475.022115725806 5323.263848924313 5463.025800243569 5300.65174167292 5333.0797551039 5922.20134894198 1.095990792944783 1.0134889901557458 0.9738645468127891 1.0903365745888447 0.833934010283403 0.9244910453279228 0.8988657317224331 0.9224653939230818 0.8950475388041136 0.9005232076509307 1.0 12.531917826204559 -6.744263439998453 24.999558750053097 0.9345374204331072 1.0363140088187826 0.5790415176016949 0.05182370384797957 190.6370167482276 277470.42671941844 0.008342641255808001 0.017332758941274243 1.8019243745427528e-07 6.744263439998453 0.10177658838567538 VTKS(ph)PAPVHR ddPTM_A549_PD325901_60min_R1 4 VTKSPAPVHR 10 1 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2;B0QYZ7 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 VT(0.041)KS(0.959)PAPVHR;VT(0.092)KS(0.908)PAPVHR;VT(0.045)KS(0.955)PAPVHR;VT(0.146)KS(0.854)PAPVHR 110.51 5.1603e-05 444424000.0 14466.099999999999 14882.6 17458.7 16407.500000000004 17892.4 17899.699999999997 17518.7 18460.7 17368.100000000002 18059.940000000002 18481.600000000002 True False 15934.687822620032 16136.808932489248 18643.552369691737 17420.954010863883 16635.69954942906 17753.93077782661 18185.383715100485 18092.486856361014 16638.179156194703 16919.632306271364 16208.480364515157 0.9831080683853292 0.9955781522749771 1.1502344421200414 1.0748048934311674 1.0263577568844273 1.0953482608212224 1.1219672237079865 1.1162358499671856 1.0265107389475125 1.0438753001985994 1.0 13.984461216034255 -8.942621606868943 7.382699372512088 1.0115669676758423 1.071956724925644 0.1403101345534602 0.050574713910398 0.2515395162108616 26.595067939935525 0.009004762374551807 0.009507713475860083 1.1412437000394733e-09 8.942621606868943 0.06038975724980178 VTKS(ph)PGETSK ddPTM_A549_MK2206_60min_R1 2 VTKSPGETSK 10 1 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.01)KS(0.686)PGET(0.258)S(0.046)K;VT(0.078)KS(0.832)PGET(0.088)S(0.002)K 68.513 0.0011312000000000002 45922000.0 11199.5 10885.0 9275.2 7410.700000000001 12403.7 12385.599999999999 11913.3 11406.9 12761.4 15628.8 14600.099999999999 True False 13089.701798513766 11439.00000640593 10590.562830137149 9226.321832678963 10579.132161082036 13696.235971104103 14077.792401747029 13023.863007166156 9870.96327576827 12098.243225326987 10974.492227739061 1.1927387187380127 1.042326129448867 0.9650162039723811 0.8407060337022761 0.9639746369624541 1.2480063484382065 1.2827739187936262 1.1867394624643421 0.8994460127110466 1.102396627950361 1.0 13.42186656965453 -8.775397169611612 24.995811633853403 0.9525161718210544 1.0836549304725551 0.047439114834143425 0.1367983133521695 335.73048777814483 601228.6683892439 0.025267115272458944 0.02696351287036584 1.6772694254109875e-09 8.775397169611612 0.1311387586515007 VTKS(ph)PGETSK ddPTM_A549_PD325901_60min_R1 1 VTKSPGETSK 10 1 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.025)KS(0.519)PGET(0.368)S(0.088)K 71.933 0.00066449 35195000.0 7695.2 7236.6 6510.5 6958.7 7075.2 5706.1 5819.3 5657.1 7100.4 7337.0 7533.8 True False 8476.411039093171 7846.453678849909 6952.341680816904 7388.523094645652 6578.262360114933 5659.631413451426 6040.756645943144 5544.264702590904 6801.994880306125 6873.740567859742 6607.190360693022 1.2829070416254948 1.1875628293577578 1.052238743139176 1.1182549149182797 0.9956217394991091 0.8565867039522973 0.914270108196116 0.8391259219008442 1.0294837153129444 1.0403424440065265 1.0 12.68982119566629 -5.623934081154529 0.960025815822337 0.98286404623786 1.34948978052941 0.670442255650981 0.07326025979663947 0.6483262304169682 0.647816500852093 0.012339409035781939 0.214408134423887 2.377201079739515e-06 5.623934081154529 0.36662573429155 VTKS(ph)PGETSKPR ddPTM_A549_MK2206_60min_R1 1 VTKSPGETSKPR 12 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.037)KS(0.96)PGET(0.003)SKPR 103.61 3.9447e-05 151960000.0 9688.2 10445.0 10492.0 8031.0 11775.0 9167.5 10330.0 10343.0 12010.0 12269.0 12251.0 True False 11323.33130625126 10976.605885797888 11979.923367021618 9998.595360525296 10042.913098248177 10137.598765106008 12206.827286314183 11809.151924109045 9289.754176029033 9497.424378809437 9208.738589600836 1.2296289221455774 1.1919771398651118 1.3009298994055714 1.085772526089124 1.0905851002860858 1.100867254126869 1.3255699646093768 1.282385400476541 1.0087976855505145 1.0313491132797064 1.0 13.168787834555067 -8.779308229528638 24.45819350270486 1.0041544162403757 1.1972950049301825 0.5239987408842288 0.07943536719334036 103.91699131262129 142236.94622223655 0.01435842765651629 0.015302501084717365 1.6622325041352102e-09 8.779308229528638 0.19314058868980677 VTKS(ph)PGETSKPR ddPTM_A549_PD325901_60min_R1 4 VTKSPGETSKPR 12 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.035)KS(0.913)PGET(0.026)S(0.026)KPR;VT(0.153)KS(0.8)PGET(0.038)S(0.009)KPR;VT(0.059)KS(0.857)PGET(0.025)S(0.059)KPR;VT(0.169)KS(0.818)PGET(0.011)S(0.002)KPR 57.148 0.0047831 280799000.0 20121.0 19416.1 19740.2 19652.6 23132.3 22436.4 19814.3 20867.5 20712.1 22493.9 23821.5 True False 22163.66910770268 21052.362887808875 21079.888679465777 20866.496467707042 21507.567050102705 22253.685397164725 20568.344029301 20451.28134226294 19841.642465267938 21073.631315167022 20891.606516930216 1.0608886918170513 1.0076947826270988 1.0090123352832143 0.9987980795443938 1.0294836365347646 1.065197421707646 0.9845266812120336 0.9789233453966097 0.949742301971301 1.0087128195760962 1.0 14.350635816181018 -7.93916199094906 11.239739758327538 0.9760841333533194 1.0253715790987528 0.4341714097007765 0.024288703532078567 0.402587790399439 72.87175466094345 0.0040616612858567665 0.005613103791726695 1.150371222808842e-08 7.93916199094906 0.04928744574543331 VTKS(ph)PGETSKPRPFAGGGYR ddPTM_A549_MK2206_60min_R1 3 VTKSPGETSKPRPFAGGGYR 20 3 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.009)KS(0.991)PGETSKPRPFAGGGYR;VT(0.057)KS(0.926)PGET(0.014)S(0.003)KPRPFAGGGYR;VT(0.474)KS(0.522)PGET(0.003)S(0.001)KPRPFAGGGYR 95.13799999999999 5.9561e-07 379320000.0 7492.200000000001 7884.4 7606.400000000001 7540.0 11818.5 9114.099999999999 8767.5 7498.7 12998.800000000001 12378.8 13106.9 True False 8756.700193296561 8285.682283004771 8685.101896579601 9387.300338483465 10080.01430587228 10078.54801255006 10360.441261641787 8561.663688805622 10054.592554818166 9582.420482550022 9852.094997962553 0.8888160533477881 0.8410071446446953 0.881548736423645 0.9528227590603613 1.0231340956372084 1.0229852650257978 1.051597783393721 0.8690196035032349 1.0205537560181352 0.9726276984267508 1.0 13.26621482362652 -6.380287883883497 2.582428435953162 1.003988836241568 0.864383119894205 0.5679710217817491 0.0466302070205089 0.13500038344443877 1.7371387009250536 0.0063699727959298305 0.017138994330913135 4.165931418534697e-07 6.380287883883497 -0.13960571634736307 VTKS(ph)PGETSKPRPFAGGGYR ddPTM_A549_PD325901_60min_R1 3 VTKSPGETSKPRPFAGGGYR 20 3 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.075)KS(0.924)PGET(0.001)S(0.001)KPRPFAGGGYR;VT(0.042)KS(0.957)PGET(0.001)SKPRPFAGGGYR;VT(0.183)KS(0.812)PGET(0.002)S(0.003)KPRPFAGGGYR 82.486 2.4419e-05 549470000.0 8012.299999999999 7601.3 8223.3 7679.1 8940.1 10545.2 9466.8 9295.9 10643.2 9000.1 10086.8 True False 8825.702797656484 8241.888227764672 8781.382588720015 8153.420566498542 8312.178217670673 10459.323387449922 9827.064254431736 9110.485982007529 10195.903316724996 8431.832150033326 8846.18754549343 0.9976843416746932 0.9316881634465674 0.9926742501851625 0.9216875094008369 0.9396339581230333 1.1823537918069893 1.1108812925222233 1.02987710074593 1.1525759842067964 0.953160003297557 1.0 13.110840113388043 -7.231741064645291 24.82332127026964 1.0803429769824917 0.9553419039765835 0.43078134886499775 0.06526809163046074 455.38981244381495 380637.70150945603 0.009733119126597401 0.016856347704177585 5.864877364142659e-08 7.231741064645291 -0.12500107300590824 VTKS(ph)PQK ddPTM_A549_PD325901_60min_R1 1 VTKSPQK 7 1 Q9NVP1 Q9NVP1 DDX18 ATP-dependent RNA helicase DDX18 1 VT(0.035)KS(0.965)PQK 49.35 0.015288999999999999 58148000.0 14098.0 11641.0 10438.0 8708.3 9783.0 7834.5 5488.3 6500.0 7258.5 12858.0 16975.0 True False 15529.218581600942 12622.027924093049 11146.385448793008 9246.191913015744 9095.875829517807 7770.698429520193 5697.160259812999 6370.3524008486465 6953.450487113683 12046.143685639996 14887.18261339086 1.0431267611127828 0.8478453077306697 0.7487236328227044 0.6210840662825546 0.610987052804482 0.5219723994337608 0.38268894845747814 0.4279085281803814 0.4670763211340694 0.8091620824752038 1.0 13.86178313049573 -5.479065506390226 1.5756952000949465 0.6620579745161967 1.0965808924644163 0.35250073810023186 0.17399729449942347 0.9303311439896957 2.9224508576318295 0.03492491458256866 0.5437761332882958 3.3184440034677074e-06 5.479065506390226 0.4345229179482195 VTKSPGET(ph)SKPR ddPTM_A549_MK2206_60min_R1 2 VTKSPGETSKPR 12 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.007)KS(0.049)PGET(0.472)S(0.472)KPR;VT(0.058)KS(0.27)PGET(0.658)S(0.013)KPR 76.759 0.00039021 163958000.0 6938.299999999999 7150.2 7842.900000000001 6495.7 8315.1 7013.0 7507.9 7044.1 8696.300000000001 9600.599999999999 9580.7 True False 8109.315414851383 7514.114639026524 8955.141152803459 8087.1467916030515 7091.959804946364 7755.111005147361 8871.988246168277 8042.62274665151 6726.6019351374935 7431.817792093719 7201.5477761316415 1.1260517415059565 1.0434027340526484 1.2435022902276394 1.1229734277965333 0.9847827196886079 1.0768672577373457 1.231955757562706 1.1167908617238471 0.9340494771737433 1.0319750730148969 1.0 12.814091292463491 -8.752832863807793 24.906327991966133 0.9688566974599058 1.1180821720403284 0.37158797561775025 0.07385263015306083 115.59638313748793 334523.270918532 0.012518531283693806 0.014085206736188478 1.7667176028464312e-09 8.752832863807793 0.14922547458042268 VTKSPGET(ph)SKPR ddPTM_A549_PD325901_60min_R1 1 VTKSPGETSKPR 12 2 Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;Q9UNZ2-6 Q9UNZ2 NSFL1C NSFL1 cofactor p47 1 VT(0.019)KS(0.224)PGET(0.739)S(0.017)KPR 68.044 0.0015248 223120000.0 3163.7 2755.5 2876.5 2719.7 3045.5 2986.3 3252.8 2359.7 2963.6 2931.6 2738.7 True False 3484.876495007155 2987.7156554280923 3071.716587799681 2887.68969211315 2831.5945864046307 2961.980562904611 3376.587084000458 2312.633932351161 2839.0501981966117 2746.4982756900154 2401.857262049695 1.4509090736029977 1.2439189050220405 1.2788922290820655 1.202273647872337 1.1789187605545748 1.2332042414447721 1.405823375665109 0.9628523596683708 1.1820228633294494 1.1434893817737575 1.0 11.22993470154582 -4.03646898103827 0.0292490154292909 7.4162175023678e-11 2.7529826213745427 0.3869052082595824 0.10925469044051539 446.1226691739953 1.4121781956982538 48.64595469627978 89.84916256195713 9.19456143509471e-05 4.03646898103827 2.7529826213003807 VTLATLK ddPTM_A549_MK2206_60min_R1 1 VTLATLK 7 0 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 0 113.89 0.020637 12177000.0 3007.8 3123.2 3141.2 2787.2 3873.8 2868.5 2954.9 3395.6 4433.3 4058.6 4255.8 False True 3515.4431063502566 3282.15753973422 3586.6693938704043 3470.064125122164 3303.9691515918316 3172.0427660438054 3491.767081154868 3876.93669858887 3429.1646285253537 3141.759441179883 3198.9674058952946 1.0989305798714102 1.026005308364698 1.1211959794465625 1.084745070777299 1.0328236372471418 0.9915833341090408 1.0915294337541483 1.2119337919617947 1.0719598524842218 0.9821167403550332 1.0 11.643390577649347 -10.281029717827831 1.0691710988911038 1.006529780121459 1.0790870233382708 0.2712501001766433 0.05525277201533016 0.5514104042785458 1.245362345812244 0.02341513862419721 0.01040976614628545 5.235646089712867e-11 10.281029717827831 0.07255724321681178 VTLATLK ddPTM_A549_PD325901_60min_R1 2 VTLATLK 7 0 P06748;P06748-2;P06748-3;E5RI98 P06748;P06748-3;E5RI98 NPM1 Nucleophosmin 0 ; 120.62 0.018302000000000002 51415000.0 12360.3 11437.5 11720.1 11856.2 13722.6 14478.0 12461.1 13166.599999999999 14589.5 12817.8 13939.4 False True 13615.108556828067 12401.378264909743 12515.496464686608 12588.530546616143 12758.771916399997 14360.095968165593 12935.313979475568 12903.98183400211 13976.354051352906 12008.481920500568 12224.942169137004 1.1137155798741254 1.014432468745592 1.023767334972196 1.0297415212643746 1.0436672615606064 1.1746555337021538 1.0581083984292345 1.0555454296200601 1.143265453364475 0.9822935564322823 1.0 13.57754001998286 -7.043347240585569 24.97395870528447 1.0755136515797807 1.041036012135135 0.03307615977406342 0.05715149779464132 1078.9669917138442 621632.4095051363 0.009172186306191031 0.015887228194609793 9.050087109270676e-08 7.043347240585569 -0.03447763944464577 VTLEARNS(ph)SEKLPTELSK ddPTM_A549_MK2206_60min_R1 1 VTLEARNSSEKLPTELSK 18 2 P38432 P38432 COIL Coilin 1 VT(0.002)LEARNS(0.972)S(0.026)EKLPTELSK 78.916 7.0191e-05 2906300.0 1245.1 1623.3 1923.6 1682.9 2121.3 1380.7 1309.8 1305.2 2221.8 2249.5 3063.4 True False 1455.2424402276429 1705.919036325102 2196.3954049564218 2095.210575548251 1809.2595800691188 1526.8047575655153 1547.7737056741832 1490.2160970073596 1718.565847485538 1741.3363876543985 2302.6732344611223 0.631979569853385 0.7408428650643198 0.9538458918468421 0.9099035608665412 0.785721375048912 0.6630574997423906 0.6721638496121215 0.647167854607084 0.7463350951259575 0.756223836536629 1.0 11.16909398173726 -10.548879520586611 0.9164879946037571 0.9957134789154475 0.7553869113655288 0.015499724854283636 0.12083449088886411 0.44238593013917227 0.6819685613494573 0.06704546741003685 0.020175850617177943 2.8256637451646083e-11 10.548879520586611 -0.24032656754991866 VTLEARNS(ph)SEKLPTELSK ddPTM_A549_PD325901_60min_R1 1 VTLEARNSSEKLPTELSK 18 2 P38432 P38432 COIL Coilin 1 VTLEARNS(0.99)S(0.01)EKLPTELSK 101.41 1.5489e-09 11492000.0 2297.7 1987.7 1947.9 2481.3 2649.5 3358.5 3141.8 3035.0 2629.3 2762.7 3019.6 True False 2530.9608125226587 2155.210454833756 2080.0962076742567 2634.564265558834 2463.408260278795 3331.1494895071273 3261.362918258926 2974.4645440885606 2518.799664637046 2588.262650514669 2648.2083428215064 0.9557257152305745 0.8138371970150616 0.7854730211513643 0.994847808217334 0.9302169396740824 1.2578879975727244 1.2315356256238286 1.1231988420214127 0.9511334980364184 0.9773636796858026 1.0 11.370800912597055 -6.409724130869019 3.9784221095482923 1.024627233912389 0.848562847992111 0.37341047458371823 0.11338318598932028 0.2462263795168044 6.755584223549029 0.01821977634507037 0.044064130620103364 3.8929234970214464e-07 6.409724130869019 -0.17606438592027795 VTLELGGK ddPTM_A549_MK2206_60min_R1 2 VTLELGGK 8 0 P00352;P05091;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;O94788 P00352 ALDH1A1;ALDH2;ALDH1A3;ALDH1A2;ALDH1B1 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 0 ; 132.08 0.0029760999999999998 63613000.0 16164.900000000001 17986.5 17551.3 16640.4 23149.0 18747.9 18579.2 18294.199999999997 26393.0 24230.0 25070.0 False True 18893.139926139123 18901.936023446975 20040.33825692018 20717.29874701594 19743.812765294875 20731.790334151174 21954.800146939833 20887.458873637785 20415.027640960394 18756.426171534164 18844.427103199167 1.002584998879148 1.003051773340355 1.0634623248120918 1.0993859687832495 1.047726877403613 1.1001549806006887 1.165055325200766 1.1084157007931421 1.0833456241020238 0.9953301349421196 1.0 14.201850315282046 -5.760974300132401 24.965482318913146 1.0628927290655725 1.0028183629258536 0.22708612745220214 0.047096347884817195 16.308641580887624 875173.8191486134 0.007535103953395563 0.026032850697287013 1.7339066006042062e-06 5.760974300132401 -0.06007436613971895 VTLELGGK ddPTM_A549_PD325901_60min_R1 2 VTLELGGK 8 0 P00352;P05091;H0Y2X5;H0YMG7;O94788-4;P05091-2;O94788-2;O94788-3;P47895;P30837;O94788 P00352 ALDH1A1;ALDH2;ALDH1A3;ALDH1A2;ALDH1B1 Retinal dehydrogenase 1;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 0 ; 157.34 0.000983 136270000.0 15250.4 14126.5 15717.1 14191.2 17333.1 16339.1 15804.0 15949.2 17244.7 16523.4 15961.7 False True 16798.609381248894 15316.989731956064 16783.756920600168 15067.758193446385 16115.682851948804 16206.039786811332 16405.42986828063 15631.08069409465 16519.965229059624 15480.109704098924 13998.512089552927 1.20002820826834 1.09418698458582 1.1989672054593479 1.0763828396227506 1.1512425569840326 1.1576973097666488 1.1719409722497567 1.1166244379472376 1.1801229390221017 1.1058396496047398 1.0 13.772985869926762 -10.817452641347773 0.9171393186203023 0.9941855665342211 1.149366363110539 0.2915274312695103 0.048764908996223176 0.2710520051085002 0.37922665756762797 0.02944031527728827 0.006279846820189067 1.5224651445826136e-11 10.817452641347773 0.155180796576318 VTLQDYRLPDS(ph)DDDEDEETAIQR ddPTM_A549_PD325901_60min_R1 1 VTLQDYRLPDSDDDEDEETAIQR 23 1 H3BRF9;Q96K21-2;Q96K21;Q96K21-4 H3BRF9 ZFYVE19 Abscission/NoCut checkpoint regulator 1 VTLQDYRLPDS(1)DDDEDEETAIQR 127.92 1.9415999999999996e-22 5088700.0 2058.4 1499.3 2029.9 1995.5 1949.6 2327.8 2052.7 2436.8 1933.1 2321.4 2394.4 True False 2267.367252686008 1625.6512727938084 2167.661220780314 2118.7575028906817 1812.6668217548727 2308.8431685796318 2130.8166217805397 2388.1961123673823 1851.8585295363312 2174.8264078273983 2099.9039793521692 1.079748062283068 0.7741550512682631 1.0322668284332925 1.0089782788755555 0.8632141467316469 1.0994994015354556 1.0147209790220537 1.137288245486421 0.8818777180981574 1.0356789782827798 1.0 11.036107645087013 -4.9790614782969485 17.28629124170183 0.9647580739237598 1.3443374297523751 0.034713084956571105 0.10300601867805832 10193492.15853118 199235540.3967309 0.013482205788216123 104813883.56202891 1.049393866980438e-05 4.9790614782969485 0.37957935582861535 VTLT(ph)PDSK ddPTM_A549_MK2206_60min_R1 2 VTLTPDSK 8 0 C9J5X9;Q8NB91 C9J5X9 FANCB Fanconi anemia group B protein 1 VTLT(0.97)PDS(0.029)K;VT(0.009)LT(0.979)PDS(0.013)K 77.66199999999999 0.0046895 7743700.0 4371.1 4277.3 4071.0 4333.4 5312.8 4356.3 3823.0 3811.3 6601.5 5466.1 5660.0 True False 5108.834816865354 4494.996300174559 4648.329015168224 5395.083194533717 4531.2941578236005 4817.280774522096 4517.589614286461 4351.563446616729 5106.270790429277 4231.3042136286795 4254.465791946841 1.2008169924731147 1.056536007101764 1.0925764226302903 1.2680988538551463 1.065067714588459 1.1322880498041827 1.0618465008786016 1.0228225256514418 1.20021432540245 0.9945559373489373 1.0 12.05476227727999 VTLT(ph)PDSK ddPTM_A549_PD325901_60min_R1 2 VTLTPDSK 8 0 C9J5X9;Q8NB91 C9J5X9 FANCB Fanconi anemia group B protein 1 VT(0.071)LT(0.925)PDS(0.004)K;VT(0.001)LT(0.997)PDS(0.002)K 123.86 0.0011972999999999999 10755100.0 6250.1 6097.5 5538.0 5841.5 7084.9 6296.9 5813.5 6136.9 6142.200000000001 6433.7 6996.1 True False 6884.605550919565 6611.357724178112 5913.841982699333 6202.3161879909385 6587.281065578115 6245.620134130541 6034.735923769265 6014.494715195083 5884.064694075864 6027.475084017886 6135.624051931892 1.1220709568657234 1.0775363138646719 0.9638533802991519 1.0108696581626522 1.0736122372921484 1.0179274481727765 0.9835569899151725 0.9802580249846518 0.9590002001871643 0.9823735993276913 1.0 12.582994371963538 -7.621733597954268 3.333276899895233 0.9802118249358408 1.0444667732697002 0.41195424284251414 0.03873723816290356 0.21115197780725242 4.668005904279962 0.006381799309060687 0.009731701199763234 2.3892764476311073e-08 7.621733597954268 0.06425494833385936 VTLT(ph)PLK ddPTM_A549_PD325901_60min_R1 1 VTLTPLK 7 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 VT(0.243)LT(0.757)PLK 54.982 0.043601 3054600.0 877.42 827.38 869.15 951.46 975.6 853.02 991.86 933.99 1129.6 1075.9 1216.4 True False 966.495032477535 897.1062162903626 928.1357456235334 1010.2295232775591 907.0772216372866 846.0732879378799 1029.6057750666184 915.3608367490192 1082.1268402898138 1007.9674903857576 1066.790511394914 0.9059839042004277 0.8409394409754587 0.8700262476181211 0.9469802294703608 0.8502861732911465 0.7931016248275131 0.96514335670302 0.8580511609089133 1.0143761392054813 0.9448598198232562 1.0 10.059061182619711 -8.764964710601268 24.998939589791945 1.00678874112144 0.8786004451410309 0.47183872972533114 0.04943321104508473 40.44095257139092 286775.39823229273 0.007541063283429979 0.008184925038762393 1.7180479846420342e-09 8.764964710601268 -0.12818829598040915 VTLT(ph)PLKMENESQSK ddPTM_A549_MK2206_60min_R1 2 VTLTPLKMENESQSK 15 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 VT(0.044)LT(0.953)PLKMENES(0.001)QS(0.001)K;VT(0.011)LT(0.972)PLKMENES(0.008)QS(0.009)K 61.102 0.0021181 8262000.0 4343.4 4550.7 5105.1 5076.6 6559.9 4785.0 4947.4 4663.200000000001 7394.4 6601.0 7305.9 True False 5076.45973406533 4782.3111923887445 5829.079944813384 6320.367227897234 5594.947399846984 5291.345523974068 5846.278539817115 5324.222880451062 5719.580206430398 5109.829515406399 5491.643397417746 0.9243971916407314 0.8708342560329864 1.0614454586680384 1.1509063445141334 1.0188111271896885 0.9635267880762503 1.0645772343058773 0.9695135854878327 1.0415061198474451 0.9304736570858039 1.0 12.423022231072034 -5.759287268409017 24.999635766386298 1.0266797827093734 0.8976156931559979 0.40570022861121324 0.05801023352866053 33.209689006524144 385745.6238899166 0.00693116825537718 0.024465090205629657 1.7406551188550191e-06 5.759287268409017 -0.12906408955337556 VTLT(ph)PLKMENESQSK ddPTM_A549_PD325901_60min_R1 2 VTLTPLKMENESQSK 15 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 VT(0.383)LT(0.616)PLKMENESQSK;VT(0.004)LT(0.996)PLKMENESQSK 97.32 5.9036000000000005e-06 8797200.0 7647.1 7781.299999999999 8129.3 8180.1 9875.8 9283.3 9434.8 10578.0 10025.3 9669.900000000001 9041.0 True False 8423.42796250252 8437.057459474725 8681.003183452096 8685.366198644984 9182.157877660426 9207.699882668305 9793.846476920664 10367.013491719532 9603.971504919864 9059.340863724543 7929.01431562102 1.062354994858245 1.0640739344930688 1.0948401450542946 1.095390404521514 1.1580453146074634 1.1612666488100716 1.2351909187029366 1.3074782159612688 1.2112440616986901 1.1425557456589095 1.0 12.952925815111977 -6.331842997462603 1.9198339168708811 1.136061751181508 1.06707813632573 0.16579602234578716 0.0771018909935088 0.8409054841620098 5.937578531241149 0.015765443612835238 0.049618700066518404 4.6575443877169143e-07 6.331842997462603 -0.06898361485577809 VTLTGDT(ph)EDEDSASTSSSLKR ddPTM_A549_PD325901_60min_R1 1 VTLTGDTEDEDSASTSSSLKR 21 1 Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 Q9UIF8-4 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 VTLTGDT(1)EDEDSASTSSSLKR 131.94 9.6105e-18 6989500.0 5490.6 5580.4 5553.4 5432.3 5576.4 5371.2 6069.7 5594.5 4926.3 5782.5 6389.0 True False 6048.001670033911 6050.679892415502 5930.287119307058 5767.840833351568 5184.732901535638 5327.458728015683 6300.685754967287 5482.91330869965 4719.264742669717 5417.391963152376 5603.19350320791 1.0793847591683818 1.079862740587381 1.0583762841515079 1.0293845518719629 0.9253174816410147 0.9507897103617133 1.124481200115622 0.9785336354278327 0.8422455408630576 0.9668400636263659 1.0 12.452033600770788 -6.4251550395498445 0.5293267286061611 0.9349121514443867 1.1157695828637182 0.25776552315594536 0.06712705592505164 1.5110084206027288 0.5592796124400934 0.017298770704879226 0.13544891867909747 3.7570325737950037e-07 6.4251550395498445 0.18085743141933153 VTLTS(ph)EEEAR ddPTM_A549_MK2206_60min_R1 1 VTLTSEEEAR 10 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 1 VTLT(0.074)S(0.926)EEEAR 90.306 0.00066468 5564900.0 2785.2 2435.7 2587.5 2268.6 3024.0 2890.5 2934.6 2447.7 3509.2 3195.1 4189.3 True False 3255.273668397744 2559.666726284146 2954.446407945904 2824.4071018413224 2579.173605868576 3196.370791441387 3467.7788339223252 2794.668970766867 2714.37180304089 2473.3246909066766 3148.981191201929 1.0337545608378957 0.8128555144869416 0.9382229453133781 0.8969272695983552 0.8190501782210188 1.015049184914747 1.1012383445195222 0.8874835386680017 0.86198412700104 0.7854364763489228 1.0 11.62066942497417 -7.269342636260505 24.96904887960597 0.9482447761871806 0.8972465068861882 0.04196506635189923 0.09617123155138478 1376.3922205744705 4348478.832117893 0.013471224252232794 0.021776416249905582 5.378452825076635e-08 7.269342636260505 -0.05099826930099238 VTLTSEEEAR ddPTM_A549_MK2206_60min_R1 1 VTLTSEEEAR 10 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 187.82 8.9263e-14 22445000.0 5768.2 6194.8 5365.4 5909.3 7566.8 5868.2 5785.3 5689.6 8683.7 8724.9 7915.3 False True 6741.731141049784 6510.088859869867 6126.294398915149 7357.078765278562 6453.733743679347 6489.169029004094 6836.414123863835 6496.118223669228 6716.855815019425 6753.939030293783 5949.7125588333665 1.1331187976535992 1.0941854409763923 1.0296790539602818 1.236543562824009 1.0847135352946882 1.0906693331545592 1.1490326727992948 1.091837321455913 1.1289378686113336 1.1351706428685204 1.0 12.538604255609947 -10.75669319619957 0.7855550414951833 0.9920981780491163 1.1157130869286818 0.0 0.06292694508205962 0.5561916192703029 0.5450830771868106 0.0438475088788001 0.008717768640536073 1.7510832903116017e-11 10.75669319619957 0.1236149088795655 VTLTSEEEAR ddPTM_A549_PD325901_60min_R1 1 VTLTSEEEAR 10 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 219.97 9.666599999999999e-27 31353000.0 12504.0 14612.0 14586.0 14280.0 15090.0 13987.0 12591.0 15394.0 14019.0 15710.0 15656.0 False True 13773.396875041708 15843.40452081845 15575.893672743308 15162.043167766951 14030.130457673906 13873.094509375074 13070.157395059574 15086.954593640621 13429.830182385713 14718.067918914632 13730.411251560965 1.0031306872527839 1.1538914771410993 1.1344083864183265 1.1042672276872427 1.0218288586278774 1.0103917686950483 0.9519130312701792 1.0987984494583463 0.9781083709971848 1.0719320528175282 1.0 13.745087217103078 -6.844554797618766 3.245265815052033 0.9971193480658948 1.1063653219511311 0.2912027440967305 0.05416595589892904 0.14573339406237304 3.0735010909452924 0.006802467550446946 0.013809793715021484 1.4303594921367275e-07 6.844554797618766 0.10924597388523638 VTLYNTDQDGSDS(ph)PR ddPTM_A549_MK2206_60min_R1 1 VTLYNTDQDGSDSPR 15 0 C9JXI1;C9JVP0;Q9UPW0-2;Q9UPW0 C9JXI1 FOXJ3 Forkhead box protein J3 1 VTLYNTDQDGSDS(1)PR 209.36 2.4630999999999997e-45 11777000.0 4077.3 4643.5 4424.8 4289.7 6900.5 4478.1 4627.1 4789.1 6864.2 6517.6 6404.1 True False 4765.44855958571 4879.834316007893 5052.303175218951 5340.676692571951 5885.445591037078 4951.969569677798 5467.784175847473 5467.969591003643 5309.469659874976 5045.269633330209 4813.785225831584 0.9899586990324182 1.0137208219888745 1.049548938765992 1.1094547101754724 1.2226232195517954 1.0287059636779583 1.1358596030638053 1.1358981206019734 1.1029718632612575 1.0480878137762442 1.0 12.232956059931109 -3.5841038115438146 11.2465249315013 1.0677443219032838 0.7005420748868216 0.0 0.06879000945706731 0.0 0.0 0.009809242450764533 0.0 0.00026055306627599723 3.5841038115438146 -0.3672022470164622 VTNDIS(ph)PES(ph)SPGVGR ddPTM_A549_MK2206_60min_R1 1 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 VT(0.001)NDIS(0.997)PES(0.865)S(0.136)PGVGR 74.77199999999999 0.00081692 5932400.0 1129.3 1381.4 914.16 886.04 1455.4 1093.6 936.42 1110.9 1807.2 1301.1 1434.1 True False 1319.898231265823 1451.707359563541 1043.8016341209 1103.1198397758476 1241.3125879567222 1209.3240261270714 1106.5553927831877 1268.3734769885666 1397.8720855053848 1007.1806063468055 1077.9733908535277 1.2244256142730403 1.3467005511277925 0.968299999774975 1.0233275228643717 1.151524331202521 1.1218496081517761 1.0265145709274226 1.1766278163733543 1.296759361006643 0.934327892406816 1.0 10.074105851103658 -5.7397460652298005 24.99997127511182 1.1207657116648337 1.2855631191252899 0.28806163248272243 0.1101585501813642 283.78136277410283 327032.32891975355 0.01680316725258414 0.06496021522098261 1.8207651604997901e-06 5.7397460652298005 0.16479740746045612 VTNDIS(ph)PES(ph)SPGVGR ddPTM_A549_PD325901_60min_R1 1 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 VT(0.042)NDIS(0.972)PES(0.922)S(0.064)PGVGR 109.1 3.8953e-06 12068000.0 1433.7 1420.6 1213.6 1207.7 1819.8 1387.4 1620.5 1246.1 1336.1 1329.6 1474.5 True False 1579.248168565843 1540.3189475961344 1295.9621939696485 1282.2968861142954 1691.9835259691831 1376.1014743910039 1682.169014271626 1221.2455579534605 1279.9483634129074 1245.6488290890438 1293.145847625616 1.2212452071555178 1.1911409300229827 1.0021779030951565 0.99161041151604 1.308424358378357 1.0641502479536282 1.3008347181876718 0.9443989324141792 0.9897942801757893 0.9632701766596685 1.0 10.336669283538011 -8.291421855393178 24.995515774785634 0.9912373417415475 1.1460098443435938 0.41817321435968025 0.10105313099253636 558.2603240181819 465403.6702626196 0.01588205796323604 0.019201708981349066 5.111850506437774e-09 8.291421855393178 0.15477250260204622 VTNDIS(ph)PES(ph)SPGVGRR ddPTM_A549_MK2206_60min_R1 2 VTNDISPESSPGVGRR 16 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 VT(0.041)NDIS(0.955)PES(0.524)S(0.48)PGVGRR;VT(0.041)NDIS(0.945)PES(0.594)S(0.42)PGVGRR 43.696000000000005 0.015508000000000001 8871800.0 782.47 775.48 591.55 388.89 536.12 531.8 393.23 356.22 873.98 810.73 789.68 True False 914.531806445204 814.9486196571123 675.4406850706861 484.1680674579356 457.2574581938698 588.0747230197295 464.6748009484343 406.71527587799727 676.0249254592716 627.5855299235615 593.5806619407388 1.540703505156487 1.3729366064463775 1.1379088443722245 0.815673586593819 0.7703375253143286 0.9907241942434456 0.7828334559100344 0.6851895655566395 1.1388931088977488 1.0572876951072534 1.0 9.213300281435856 -5.76433458310426 2.4890080084768518 0.9797146072909412 1.5092959739868035 0.662948852519486 0.14627906500470444 0.16894650031748956 2.02188110977073 0.024296330013046555 0.12159029958389417 1.7205425478423973e-06 5.76433458310426 0.5295813666958623 VTNDIS(ph)PES(ph)SPGVGRR ddPTM_A549_PD325901_60min_R1 1 VTNDISPESSPGVGRR 16 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 VT(0.225)NDIS(0.776)PES(0.525)S(0.475)PGVGRR 41.257 0.023066999999999997 5063900.0 111.37 149.51 164.16 425.26 448.92 393.94 362.06 492.5 291.16 352.89 444.07 True False 122.67620041373928 162.10973240539064 175.30088477427276 451.52734436446576 417.3894078899249 390.73188325039087 375.83839142683416 482.6767011412244 278.9235577361742 330.608465175416 389.45220519166315 0.3149968052006947 0.4162506470482321 0.45012168999788055 1.1593909043145698 1.0717346116566804 1.003285841090816 0.9650436855065972 1.2393733934660407 0.7161945779685753 0.8489063889437009 1.0 8.605302476819357 -6.165209750642344 6.073502837458543 0.9368985063504663 0.3849199070433566 0.768691083426916 0.1454045853822023 0.10708620834462186 5.598410481486055 0.02412103287092707 0.06489684481202342 6.835814191120036e-07 6.165209750642344 -0.5519785993071098 VTNDIS(ph)PESS(ph)PGVGR ddPTM_A549_MK2206_60min_R1 3 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 VTNDIS(1)PES(0.168)S(0.832)PGVGR;VT(0.001)NDIS(0.991)PES(0.242)S(0.767)PGVGR;VTNDIS(1)PES(0.005)S(0.995)PGVGR 165.58 3.5881e-20 65898700.0 3525.8199999999997 4794.77 3827.06 3585.31 6044.15 4476.360000000001 3872.5299999999997 4728.73 5784.68 5593.3 6963.2 True False 4120.892217977211 5038.803312881485 4369.794655069933 4463.711110950683 5155.063541637088 4950.045444032715 4576.118574159753 5399.041958628269 4474.459216235774 4329.769645284439 5234.0452654565825 0.7873245279657956 0.9626976950574642 0.8348790339872503 0.8528224126012215 0.9849100036752156 0.9457398996339987 0.8742986241179486 1.0315237421159928 0.8548759113273455 0.8272319832348144 1.0 12.353710685923723 VTNDIS(ph)PESS(ph)PGVGR ddPTM_A549_PD325901_60min_R1 3 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 2 VTNDIS(1)PES(0.018)S(0.983)PGVGR;VTNDIS(1)PES(0.495)S(0.505)PGVGR;VTNDIS(1)PES(0.007)S(0.994)PGVGR 166.9 1.0381e-20 105061000.0 7404.200000000001 8004.000000000001 7752.800000000001 6877.8 7889.799999999999 7614.9 8108.0 8651.6 8460.8 7977.9 8257.599999999999 True False 8155.868933316053 8678.525170040442 8278.951629373676 7302.626085382877 7335.647666332379 7552.886779112048 8416.554376867838 8479.037050951098 8105.221999224556 7474.174032483072 7241.967549239262 1.1261951780179948 1.1983656528469373 1.1431909316195907 1.0083759745857999 1.0129357272669577 1.0429329775035305 1.162191672310374 1.1708195311979526 1.119201645701378 1.0320640049358136 1.0 12.822165996872963 -10.64443251954865 0.9552278345217644 1.0010398798654196 1.108203837823712 0.2530710070253859 0.060938809386587085 0.6058353515140843 0.9995651922221123 0.04310701255745921 0.012050016342024149 2.2676053891227032e-11 10.64443251954865 0.10716395795829237 VTNDIS(ph)PESSPGVGR ddPTM_A549_MK2206_60min_R1 1 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VT(0.012)NDIS(0.662)PES(0.316)S(0.01)PGVGR 159.69 1.2972999999999999e-19 214300000.0 3551.4 4093.7 3603.4 3008.0 4557.2 3504.1 3655.8 3736.6 5274.3 5545.3 6058.6 True False 4150.789496606259 4302.0518443935625 4114.416303919721 3744.960135034252 3886.8419168863375 3874.9015361666734 4320.011538558316 4266.274492857574 4079.6794713263907 4292.612878621891 4554.0824111464935 0.9114436503052421 0.9446583210404658 0.9034567081722866 0.8223303394484368 0.853485195474937 0.8508632884382002 0.9486019681999452 0.9368022156154913 0.8958290832289371 0.942585682708632 1.0 12.15294468353157 -10.95852761297863 0.42389259384179906 1.0388465245997207 0.8890860161137482 0.301823351490241 0.04154558561670691 1.694172373212066 0.34044399862154817 0.11343992560393709 0.011727848868607735 1.1002018908791311e-11 10.95852761297863 -0.14976050848597255 VTNDIS(ph)PESSPGVGR ddPTM_A549_PD325901_60min_R1 1 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VTNDIS(0.85)PES(0.148)S(0.001)PGVGR 186.15 2.2369e-33 279270000.0 7258.6 8308.4 7204.6 8844.2 7745.6 7625.3 8036.0 8285.5 8000.6 8473.0 10941.0 True False 7995.4877285011 9008.578026332338 7693.547480779277 9390.486147364458 7201.5757768693775 7563.202084960154 8341.814377467927 8120.239202650989 7664.362604835948 7938.013333988769 9595.326360713374 0.8332689715732261 0.9388506120246842 0.8018015429135745 0.9786520848120807 0.7505295292878364 0.7882172841902024 0.869362235725742 0.8462702463042937 0.7987599709183976 0.8272791394037179 1.0 13.228116161533544 -10.862071563469684 1.0559421766463744 1.0019338893709384 0.8435496498056446 0.0 0.08039874431621141 0.37812068468222243 0.7334072315630413 0.045219044914283385 0.010445874656914553 1.3738155776848763e-11 10.862071563469684 -0.1583842395652938 VTNDIS(ph)PESSPGVGRR ddPTM_A549_MK2206_60min_R1 1 VTNDISPESSPGVGRR 16 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VT(0.06)NDIS(0.936)PES(0.002)S(0.002)PGVGRR 56.528999999999996 0.004303899999999999 15760000.0 892.74 815.78 834.28 596.5 1022.2 740.44 841.82 737.0 1202.2 1335.5 1124.5 True False 1043.4126866025426 857.2997175218949 952.5934489743416 742.6425267779023 871.8357341001516 818.7928693357067 994.7677973054217 841.4720069678402 929.9036195189094 1033.8096224549683 845.255615378838 1.2344344924995168 1.0142490649265414 1.1269886075200997 0.878601115764318 1.0314462492028529 0.9686926113690816 1.1768839853960311 0.9955237110027337 1.1001448586675555 1.2230733563262064 1.0 9.723243885338562 -5.2567000188274395 24.37729199993173 1.0399671830061838 1.2344346058961249 0.2271050269297562 0.09481746279234371 292.15347474820766 1502637.8760466236 0.010046654596167614 0.11222329834439737 5.5373245797592336e-06 5.2567000188274395 0.194467422889941 VTNDISPES(ph)SPGVGR ddPTM_A549_MK2206_60min_R1 1 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VT(0.018)NDIS(0.308)PES(0.672)S(0.001)PGVGR 191.96 6.474299999999999e-34 202850000.0 3997.4 4733.8 4091.5 4155.5 5274.5 4464.7 3810.4 4039.4 6055.6 6061.0 6650.3 True False 4672.0633929531605 4974.730200305409 4671.736223424416 5173.597686547484 4498.628037087898 4937.151590571994 4502.7003573835 4611.997320143678 4684.016268806111 4691.815890452683 4998.846971057258 0.9346282092658295 0.9951755332996824 0.9345627602671625 1.0349582046623975 0.8999331372083262 0.9876580777842425 0.9007477891308957 0.9226122237481174 0.9370193358440496 0.9385796199839184 1.0 12.28737964735545 -10.806140667636805 1.110852498283418 0.999352535042233 0.9498803543034245 0.0 0.04312893631118038 0.644969499351427 1.4414013762914393 0.023891389738615418 0.006279849754234659 1.5626414223510324e-11 10.806140667636805 -0.049472180738808436 VTNDISPES(ph)SPGVGR ddPTM_A549_PD325901_60min_R1 1 VTNDISPESSPGVGR 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 VTNDIS(0.228)PES(0.691)S(0.081)PGVGR 209.42 2.4491e-45 264860000.0 8227.5 8589.8 8190.9 7896.2 8748.6 8306.9 7807.7 8445.7 8830.6 8229.3 10030.0 True False 9062.749743234619 9313.692591905727 8746.783729882985 8383.930340428671 8134.128517031536 8239.251360543918 8104.826296037376 8277.243887976523 8459.480591238698 7709.700593578878 8796.373585408566 1.0302824971267612 1.0588104861025105 0.9943624659589446 0.953112127290267 0.9247138537322286 0.93666455619975 0.9213826831413425 0.9409836687367195 0.9617009224427773 0.8764635242832044 1.0 13.102693161975818 -5.937606864476381 4.036056743747103 0.9655873997878177 1.0438843882701485 0.4706555978755329 0.036720739365083015 0.14117027012301495 4.6447582106860175 0.004589472021419484 0.015377888202536964 1.1544978687365837e-06 5.937606864476381 0.0782969884823308 VTNGAFTGEIS(ph)PGMIK ddPTM_A549_MK2206_60min_R1 4 VTNGAFTGEISPGMIK 16 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 VTNGAFT(0.002)GEIS(0.998)PGMIK;VTNGAFT(0.001)GEIS(0.999)PGMIK;VTNGAFT(0.007)GEIS(0.993)PGMIK;VT(0.001)NGAFT(0.111)GEIS(0.888)PGMIK 98.353 5.9134e-10 7594730.0 3228.6299999999997 4311.33 3574.6499999999996 3271.41 4266.27 3974.7200000000003 4074.17 3417.61 5780.7 5905.4 5772.2 True False 3773.543811575116 4530.758281820676 4081.5891216092077 4072.9055968591774 3638.707334493695 4395.322232194397 4814.393952089318 3902.0666834916656 4471.38067988102 4571.366038521575 4338.803435384373 0.8697199280337573 1.0442414249216379 0.940717684586147 0.9387163206434495 0.8386430472555719 1.01302635568809 1.1096132894213062 0.8993416598846181 1.0305561767134772 1.053600631280177 1.0 12.083081512619051 -7.422739221514615 24.999884722529362 1.0130292477165361 0.933572414244461 0.3096953488709986 0.06727843505092723 42.68801657394868 10649.779499903583 0.009345152470935515 0.014939259989149545 3.777989777619562e-08 7.422739221514615 -0.0794568334720751 VTNGAFTGEIS(ph)PGMIK ddPTM_A549_PD325901_60min_R1 4 VTNGAFTGEISPGMIK 16 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 VTNGAFTGEIS(1)PGMIK;VT(0.002)NGAFT(0.012)GEIS(0.987)PGMIK;VTNGAFTGEIS(1)PGMIK;VT(0.051)NGAFT(0.078)GEIS(0.871)PGMIK 120.9 3.317e-08 17310400.0 7148.299999999999 7633.0 6931.4 7063.2 8869.4 8422.8 7443.6 8627.5 8471.3 8449.900000000001 9847.3 True False 7873.9901536996695 8276.259698015834 7401.806485894217 7499.477822308932 8246.443941768908 8354.207509370439 7726.87027129421 8455.417744357179 8115.280720739288 7916.371871931046 8636.144527177836 0.9117483072359805 0.9583280678050896 0.8570730217171363 0.8683826212852473 0.9548756294915463 0.9673538328451841 0.8947129412873822 0.9790732100126495 0.9396879238415481 0.916655788589263 1.0 13.076171671943072 -11.540622553613746 0.15454342478971314 1.091831994770163 0.8884790020772035 0.03331978815173464 0.043021336549213564 13.51667362277105 0.39653443470124355 0.5731330138321932 0.09147025667919007 2.8799002556886443e-12 11.540622553613746 -0.20335299269295937 VTNGAFTGEISPGMIK ddPTM_A549_PD325901_60min_R1 1 VTNGAFTGEISPGMIK 16 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 89.959 6.6571e-06 3822700.0 3035.0 2590.7 2513.8 3320.0 3484.8 3259.2 3211.9 3469.9 3828.9 3263.4 3692.3 False True 3343.110965751089 2809.027381062441 2684.4015847074024 3525.0688597329317 3240.0396699073576 3232.6581557843147 3334.1306121191183 3400.6901224161115 3667.9846483584197 3057.3483670646738 3238.170507418149 1.0324073294141052 0.8674735856643102 0.8289871019941206 1.0885989022682847 1.000577227939334 0.9982976956830387 1.0296340493748366 1.0501887144687578 1.1327336346111585 0.944159166436962 1.0 11.660963238100626 -6.271356489356286 24.886899503971115 1.0530320170079728 0.9054077619250573 0.3482783651910025 0.06875117359317641 399.91256988662303 1003577.2509862488 0.009689762912733234 0.022763535991011833 5.353570308506518e-07 6.271356489356286 -0.14762425508291543 VTNPNAR ddPTM_A549_PD325901_60min_R1 2 VTNPNAR 7 0 D3YTB1;F8W727;P62910 D3YTB1 RPL32 60S ribosomal protein L32 0 ; 84.916 0.038337 17304000.0 8207.5 8459.7 7675.5 7456.799999999999 8539.1 7411.1 7118.9 7327.0 7785.6 9624.0 9814.599999999999 False True 9040.719357957843 9172.628608319737 8196.405586531007 7917.389600378473 7939.343074295771 7350.746458742373 7389.8136351115545 7180.857237079698 7458.398307153313 9016.338997557881 8607.466419875462 1.0503345487450244 1.065659528701647 0.952243690153089 0.9198281136591442 0.9223786288568109 0.8539965304736824 0.8585352849065747 0.8342591056177011 0.866503329008773 1.0475020822315722 1.0 13.071372932112968 -5.866652341131668 3.2078864552250312 0.9151936265777579 1.0604899183509353 0.4498921109033358 0.06104503981787945 0.17500320025344113 3.5129209672341646 0.009015538132149075 0.034262642530093035 1.359401231026265e-06 5.866652341131668 0.14529629177317738 VTNVLIT(ph)PGK ddPTM_A549_MK2206_60min_R1 4 VTNVLITPGK 10 0 Q96HE9 Q96HE9 PRR11 Proline-rich protein 11 1 VTNVLIT(1)PGK;VTNVLIT(1)PGK;VTNVLIT(1)PGK;VTNVLIT(1)PGK 96.64 0.00056389 10511300.0 7201.900000000001 8658.4 8330.699999999999 8210.8 11512.2 8799.0 8827.1 8794.099999999999 12392.599999999999 11455.400000000001 12906.2 True False 8417.404650450137 9099.075576983476 9512.118527797084 10222.446368596817 9818.770630119121 9730.104339696507 10430.869810166882 10040.690605801736 9585.695886915682 8867.61718387917 9701.234347000767 0.8676632631859327 0.9379296748765321 0.9805060044485833 1.053726361301352 1.012115600851833 1.0029759092155799 1.0752105801249598 1.0349910379091 0.9880903340799303 0.9140710209336075 1.0 13.243952606498121 -5.519351778701991 1.8985278207000418 1.0080580557177408 0.8589855817627198 0.5477106069906872 0.03931575519876582 0.22135630526773128 1.186419529081715 0.0043312774791555535 0.04821440630587025 3.0244626197400616e-06 5.519351778701991 -0.149072473955021 VTNVLIT(ph)PGK ddPTM_A549_PD325901_60min_R1 2 VTNVLITPGK 10 0 Q96HE9 Q96HE9 PRR11 Proline-rich protein 11 1 VTNVLIT(1)PGK;VTNVLIT(1)PGK 105.17 0.00034579 19746700.0 4324.4 4495.9 5417.4 4888.5 5434.0 5440.4 5145.9 5910.2 5675.799999999999 5281.0 5126.6 True False 4763.4099045449775 4874.785271362419 5785.0573414726205 5190.451542410976 5052.334586282303 5396.095186158873 5341.7300404445305 5792.316424537792 5437.265864126176 4947.5567587389 4496.060700194969 1.0594629881972935 1.0842347549157925 1.2866946705638904 1.1544442765610115 1.1237247277518319 1.2001829036527185 1.188091175061958 1.288309213504749 1.2093399592871137 1.10042036543776 1.0 12.134445797818595 -10.715748581918428 1.0078175799606461 1.0015523892293163 1.1800191445596295 0.27185800445392816 0.07426195633799132 0.3732125266087488 0.6828330763444049 0.04638173014087623 0.012488301994908779 1.9242053511922845e-11 10.715748581918428 0.1784667553303132 VTPDIEES(ph)LLEPENEK ddPTM_A549_MK2206_60min_R1 3 VTPDIEESLLEPENEK 16 0 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 1 VTPDIEES(1)LLEPENEK;VTPDIEES(1)LLEPENEK;VT(0.001)PDIEES(0.999)LLEPENEK 225.67 7.123999999999999e-55 25183800.0 3240.82 3050.3 3065.29 2378.25 4438.77 3382.69 3326.99 3078.0 4550.94 4466.43 4946.85 True False 3787.791185558226 3205.547241115296 3499.994214420291 2960.921356763701 3785.8328130030654 3740.6440105521056 3931.4610177438954 3514.3159259796607 3520.1593563578326 3457.4603609296473 3718.410618885555 1.018658661934831 0.8620745715479994 0.941260816286415 0.7962868172023237 1.0181319926785595 1.0059792728521237 1.0572960925230452 0.9451123843425707 0.9466838703824646 0.9298220974761209 1.0 11.86047037851277 -6.817119240539259 24.99988722037366 0.9832357126364988 0.9041522897258003 0.29143592755519065 0.061079557572734915 80.0875995141773 35958.46566923426 0.008205920976466422 0.01550774195811195 1.523634365044495e-07 6.817119240539259 -0.07908342291069848 VTPDIEES(ph)LLEPENEK ddPTM_A549_PD325901_60min_R1 3 VTPDIEESLLEPENEK 16 0 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 1 VTPDIEES(1)LLEPENEK;VTPDIEES(1)LLEPENEK;VTPDIEES(1)LLEPENEK 203.27 1.3715999999999999e-39 40847200.0 3962.5 5115.83 5677.99 4275.21 4690.91 5302.43 4852.01 5255.0599999999995 5147.1900000000005 4878.74 5874.89 True False 4364.770082961679 5546.958948106944 6063.332545927588 4539.280011993621 4361.43666436097 5259.248768095062 5036.655895671749 5150.243705785182 4930.871504135384 4570.695523789022 5152.315773996102 0.8471472391096077 1.0765953003312838 1.1768169522002936 0.881017431987284 0.8465002642837376 1.0207543556702512 0.9775518653363422 0.9995978374964172 0.9570204390463889 0.8871147895976146 1.0 12.331005300400648 -6.2946414851533214 24.990844633575296 0.9686971070175202 1.0378276121619079 0.12067157794427574 0.09111177090822264 1023.8034868509999 770603.6910498709 0.011989057914047188 0.027862320493690407 5.07409407448261e-07 6.2946414851533214 0.06913050514438768 VTPFNYNPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VTPFNYNPSPR 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 VTPFNYNPS(1)PR;VTPFNYNPS(1)PR 84.71799999999999 0.0004936 13234000.0 3368.1 3244.8 3197.1000000000004 3601.3 4516.5 3486.3999999999996 3763.8 3641.5 5333.1 4881.1 5049.1 True False 3936.5529378609926 3409.9464603386273 3650.496854432409 4483.618661668502 3852.12883297137 3855.3285339149784 4447.633740583672 4157.693776626038 4125.161365210692 3778.456119928824 3795.269121929117 1.0372262971064519 0.8984729016016045 0.9618545450017729 1.1813704160693352 1.014981733630882 1.0158248097977658 1.171888895805882 1.0954937958425206 1.0869219632872549 0.9955700105947304 1.0 11.889986475205713 -6.058153593724122 24.999949165036142 1.0593912025447134 0.9584274170336964 0.30840441564709054 0.06800434342390964 234.72264392293943 100905.78841378231 0.009423365800021271 0.02493196196271441 8.746743808872642e-07 6.058153593724122 -0.10096378551101703 VTPRPQQTSAS(ph)SPSSVNSR ddPTM_A549_PD325901_60min_R1 2 VTPRPQQTSASSPSSVNSR 19 1 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTPRPQQTS(0.002)AS(0.458)S(0.458)PS(0.079)S(0.002)VNSR;VTPRPQQT(0.129)S(0.082)AS(0.394)S(0.394)PSSVNSR 189.45 2.7861e-44 142225500.0 4790.43 4041.99 4102.3 4003.04 4996.34 4725.17 4394.9800000000005 4076.75 4280.05 5068.27 5099.28 True False 5276.750927071821 4382.622682665137 4380.70674713389 4250.298689236541 4645.414314837271 4686.689782145118 4562.233368925339 3995.4360231014925 4100.174382774807 4748.2585672436335 4472.100886999222 1.1799266296544841 0.9799919083681217 0.9795634887998562 0.9504031319133521 1.0387543644960886 1.047983911939403 1.0201543936962916 0.8934136603931645 0.9168340532509817 1.061751218772194 1.0 12.126737019250104 -8.12633905133718 11.224277493428628 0.954589882201844 1.0227719134805733 0.13467274159426346 0.06956814665937575 0.6019728682911308 51.81032105260812 0.01031727993790835 0.013322606079297923 7.475856365954201e-09 8.12633905133718 0.06818203127872924 VTPRPQQTSASS(ph)PSSVNSR ddPTM_A549_MK2206_60min_R1 3 VTPRPQQTSASSPSSVNSR 19 1 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTPRPQQTSAS(0.111)S(0.686)PS(0.174)S(0.029)VNSR;VT(0.001)PRPQQT(0.051)S(0.038)AS(0.151)S(0.623)PS(0.109)S(0.028)VNSR;VT(0.001)PRPQQT(0.003)S(0.003)AS(0.165)S(0.661)PS(0.12)S(0.038)VNS(0.009)R 129.29 5.2433e-17 156422100.0 3007.4700000000003 3111.9 2892.7700000000004 2314.2 4101.4 3244.28 3598.39 2418.3999999999996 4311.57 5090.66 5420.6900000000005 True False 3515.0574104179827 3270.282418000426 3303.0082842564925 2881.1791038883866 3498.0894930917266 3587.587556221229 4252.17088468539 2761.2156060393795 3335.0062791624878 3940.676370383081 4074.583069566845 0.862679039892947 0.8026054107047763 0.810637119887612 0.7071101643277271 0.8585147077302308 0.8804796699365398 1.0435842912235493 0.6776682568243516 0.8184901920571277 0.9671360978785987 1.0 11.992436728240996 -10.656863355391144 0.8065793184831449 1.0066134082883695 0.8282768510844528 0.29591659166770123 0.0909370263772914 0.6580633185247143 0.7209133072441276 0.07342873210569469 0.017116217647183303 2.2036196917218483e-11 10.656863355391144 -0.17833655720391672 VTPRPQQTSASS(ph)PSSVNSR ddPTM_A549_PD325901_60min_R1 2 VTPRPQQTSASSPSSVNSR 19 1 Q9ULD2;H0YC63;Q9ULD2-5;Q9ULD2-2 Q9ULD2;Q9ULD2-2 MTUS1 Microtubule-associated tumor suppressor 1 1 VTPRPQQTS(0.003)AS(0.129)S(0.867)PS(0.001)SVNSR;VTPRPQQT(0.009)S(0.009)AS(0.04)S(0.942)PS(0.001)SVNSR 211.27 1.0444999999999998e-66 135989400.0 3806.2599999999998 3539.92 4428.5 3530.44 4934.92 3800.4 4267.89 4249.92 4893.71 4141.63 5102.41 True False 4192.668713179484 3838.24148175032 4729.044640733842 3748.5072605890136 4588.308243749775 3769.4508024186057 4430.306889429019 4165.152011602258 4688.044387034937 3880.1267749850012 4474.845916841923 0.9369414704089783 0.8577371272839535 1.0568061400584083 0.8376840968938847 1.0253555829667376 0.842364379124557 0.99004680200378 0.9307922750872665 1.0476437567136339 0.8670972916366607 1.0 12.127622291321627 -8.752860339630836 24.917533692832723 1.0224984409887734 0.9347725814289892 0.0 0.082770853010682 162.66211904851752 472445.88930361695 0.010338778284391866 0.011632380965552915 1.7666058342498654e-09 8.752860339630836 -0.08772585955978418 VTPTEEHVEGPLPS(ph)PVTNGTSPAQLNGGSACSSR ddPTM_A549_MK2206_60min_R1 1 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599-2;Q15599 H3BN50;Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPS(0.969)PVT(0.03)NGTSPAQLNGGSACSSR 85.751 5.178499999999999e-07 12865000.0 359.61 472.11 454.76 560.72 828.24 476.89 523.39 505.14 995.88 681.98 943.89 True False 420.3033763796182 496.1383824551499 519.2518061748715 698.0964251716777 706.4069931628933 527.3541832660383 618.483188130105 576.7451419263703 770.3147700935716 527.9202443443197 709.4960629612556 0.5923970523886759 0.6992827844377245 0.7318600247162006 0.9839327680804898 0.9956461072025272 0.7432799289470282 0.8717218042743097 0.812894069516303 1.0857209931207712 0.7440777643513838 1.0 9.470650868476293 -4.363313970988082 0.27670733329046676 1.0421225982299884 1.0898864919878142e-15 0.1946527935949408 0.1336514359260451 7.006165698279377 0.2651442070538668 0.04809832229532571 2.715666472716891 4.331975871614205e-05 4.363313970988082 -1.0421225982299873 VTPTEEHVEGPLPS(ph)PVTNGTSPAQLNGGSACSSR ddPTM_A549_PD325901_60min_R1 1 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599-2;Q15599 H3BN50;Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPS(0.501)PVT(0.297)NGT(0.083)S(0.083)PAQLNGGS(0.01)ACS(0.012)S(0.013)R 50.665 0.0020345 28327000.0 758.33 657.0 752.49 849.69 772.75 751.55 750.58 818.82 1057.8 1024.0 1143.8 True False 835.3151033469593 712.3676957417006 803.5584964899639 902.173421513998 718.474705842777 745.4296259756081 779.1437326331358 802.4879927481364 1013.3443445985889 959.3444652430667 1003.1198511455948 0.8327171497932205 0.7101521268153093 0.8010593106818438 0.8993675286992748 0.7162401432114578 0.7431112295547773 0.7767204803527005 0.7999921363650312 1.0101926937656727 0.956360762024064 1.0 9.9702782717922 -8.742508028098065 5.913131147668463 1.0051194683575522 0.7820095272444189 0.7480317631061201 0.05250824286587781 0.049355594871704454 5.558056198522304 0.008475411542060983 0.009419573042569874 1.8092224657818565e-09 8.742508028098065 -0.22310994111313331 VTPTEEHVEGPLPSPVT(ph)NGTSPAQLNGGSACSSR ddPTM_A549_MK2206_60min_R1 1 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599-2;Q15599 H3BN50;Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPS(0.001)PVT(0.358)NGT(0.358)S(0.283)PAQLNGGSACSSR 125.93 8.6284e-22 15378000.0 574.12 727.17 608.66 334.4 674.4 535.42 330.47 693.3 1140.4 710.63 898.85 True False 671.017420113641 764.1798470058064 694.9771403518275 416.3280150117863 575.1966533722776 592.0777890169685 390.51212132703307 791.5773981422024 882.1012208445885 550.0981894460308 675.6407380020173 0.9931571356960384 1.1310446573509083 1.02861935532039 0.6161973243989667 0.8513350676177851 0.8763204403095076 0.577987826018074 1.1715951298067508 1.3055773153245753 0.8141874201854127 1.0 9.400112508354514 -8.35698171523016 24.99979643974465 1.1503802437099238 0.8741017436330818 0.16481217936879522 0.1951614239898898 45.2670744931347 11840.756754001386 0.03135225938308042 0.03790303525603428 4.395601215133021e-09 8.35698171523016 -0.27627850007684196 VTPTEEHVEGPLPSPVTNGTS(ph)PAQLNGGSACSSR ddPTM_A549_PD325901_60min_R1 1 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599-2;Q15599 H3BN50;Q15599-2 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPS(0.003)PVT(0.102)NGT(0.366)S(0.53)PAQLNGGSACSSR 123.52 9.034199999999999e-22 7918000.0 1013.0 688.84 1137.1 1094.3 1144.9 1011.7 969.99 997.66 1151.7 1211.8 1014.0 True False 1115.8390142688138 746.8909642841903 1214.2704439377778 1161.8924256643822 1064.4861736905796 1003.4610506280659 1006.903500248894 977.7608886508712 1103.2980541446348 1135.286741192918 889.2844282756022 1.254760545433726 0.8398786041182292 1.365446650507927 1.3065475889613742 1.197014295813892 1.1283915682340935 1.1322626015181276 1.0994917459049995 1.2406582405631719 1.2766295069332712 1.0 9.796501113479616 -10.937364369191586 1.1160053109578298 0.9969485217591447 1.1757138233787874 0.0 0.1534863901143279 0.6837024471939562 1.4696808265441934 0.09756864676824396 0.021310859296946587 1.1551426811296713e-11 10.937364369191586 0.17876530161964266 VTQHES(ph)DNENEIQIQNK ddPTM_A549_MK2206_60min_R1 2 VTQHESDNENEIQIQNK 17 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 VT(0.001)QHES(0.999)DNENEIQIQNK;VT(0.001)QHES(0.999)DNENEIQIQNK 215.65 9.754899999999999e-56 76433000.0 8183.4 8637.2 7988.4 7398.6 10841.2 8150.1 7463.799999999999 8741.5 11971.0 11448.4 12614.6 True False 9564.557855079023 9076.796587535995 9121.275240670559 9211.25733213578 9246.473841250805 9012.538172401473 8819.875847007921 9980.634394720993 9259.587613758828 8862.19848874089 9482.046674751355 1.0087018323319772 0.957261327526002 0.9619521558524434 0.9714418888765198 0.9751559086786791 0.9504844767743992 0.9301658333420092 1.0525822891483196 0.9765389194312988 0.9346292833950094 1.0 13.210982779315362 -8.216550979986705 24.99983166719601 0.9933862732592635 0.964684090868579 0.13458165762145946 0.03138141166406011 509.9968289310134 284034.6129412999 0.004062607380624452 0.005244799161357037 6.073639628000514e-09 8.216550979986705 -0.02870218239068456 VTQHES(ph)DNENEIQIQNK ddPTM_A549_PD325901_60min_R1 1 VTQHESDNENEIQIQNK 17 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 VTQHES(1)DNENEIQIQNK 237.15 2.1898999999999997e-74 116410000.0 18907.0 17623.0 20209.0 19269.0 23960.0 20763.0 19146.0 21422.0 22126.0 23735.0 24610.0 True False 20826.42472140224 19108.152057923875 21580.504266589174 20459.202366925863 22277.13225751269 20593.91301195071 19874.6115070932 20994.72140476611 21196.121165237622 22236.368049359564 21583.126015643546 0.9649401438098982 0.8853282904466295 0.9998785278345467 0.9479258172378247 1.0321550382167128 0.9541672970367754 0.9208402662657853 0.9727377484405662 0.982069101105863 1.030266330893984 1.0 14.397616213821797 -7.030805073736643 0.007002549593914474 1.9255211887107098 2.350154856224011e-08 0.23541761995238852 0.037053945973010496 5882.476881716186 12.13010402953152 1625.20738118799 1710.3428961573188 9.315258824279257e-08 7.030805073736643 -1.9255211652091613 VTQQEKT(ph)PPPRPSPLEAGSDGCEEPK ddPTM_A549_MK2206_60min_R1 1 VTQQEKTPPPRPSPLEAGSDGCEEPK 26 2 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 VT(0.018)QQEKT(0.954)PPPRPS(0.012)PLEAGS(0.016)DGCEEPK 64.498 0.00013163 25166000.0 2294.6 3221.6 3376.0 2477.8 4188.8 3399.0 2783.4 3329.3 4092.2 3886.8 4493.8 True False 2681.8723824161507 3385.5656794338406 3854.7675645315467 3084.8611112326694 3572.633068869809 3758.679923926403 3289.1077510868267 3801.2384705536374 3165.323233900585 3008.7691805001637 3377.865437429455 0.7939547717617333 1.0022796177488482 1.1411844657331918 0.9132575492942783 1.0576599734501477 1.1127382051035006 0.9737237353036263 1.1253374478547518 0.9370779542684761 0.8907309175672278 1.0 11.721896141925141 -2.0513890612726784 19.775337284099415 0.9934410510304583 0.005020639004412186 0.0 0.1035905003640478 0.0 0.0 0.01224978845613038 0.0 0.008884048866864573 2.0513890612726784 -0.9884204120260461 VTQQEKT(ph)PPPRPSPLEAGSDGCEEPK ddPTM_A549_PD325901_60min_R1 2 VTQQEKTPPPRPSPLEAGSDGCEEPK 26 2 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 VT(0.001)QQEKT(0.999)PPPRPSPLEAGSDGCEEPK;VT(0.006)QQEKT(0.971)PPPRPS(0.016)PLEAGS(0.007)DGCEEPK 181.85 1.6200999999999997e-57 68743000.0 15384.400000000001 19657.3 19281.2 16410.8 18292.0 16777.1 18519.2 20118.1 15442.0 18692.0 19628.2 True False 16946.212962603306 21313.889658300362 20589.738179274536 17424.457844369044 17007.23302397423 16640.472860029775 19223.958290095095 19716.82871315586 14793.02644100151 17511.78393000332 17214.0558334114 0.9844404553232465 1.23816780104381 1.1961003483740973 1.0122226866808035 0.9879852365160952 0.9666793823063862 1.1167593782740382 1.145391237484355 0.859357410255936 1.0172956390680485 1.0 14.071299432847036 -7.245369585685589 0.5207664080313444 0.9440071908502173 1.1431265056244708 0.07327996995190489 0.10330616518995864 1.055843882898068 0.5239900534715107 0.027258160950054396 0.09019723954352565 5.683690415078415e-08 7.245369585685589 0.1991193147742535 VTQSNFAVGYK ddPTM_A549_MK2206_60min_R1 2 VTQSNFAVGYK 11 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 ; 136.48 1.0468e-07 4154300.0 5461.6 6280.200000000001 5902.5 5598.4 8023.5 6354.799999999999 6163.0 5851.9 9367.2 8150.0 8659.9 False True 6383.3845567001 6599.835355096971 6739.563255227324 6970.008251321722 6843.253778666184 7027.26071802516 7282.737324835852 6681.424745692128 7245.544156344647 6308.909339579175 6509.407828918809 0.9806398253833727 1.0138918206624614 1.035357352367142 1.07075918954665 1.051286685136584 1.0795545313362804 1.1188018198032448 1.0264258933061643 1.1130880637337648 0.9691986591393312 1.0 12.668310589782562 -5.627766581626762 1.5495787347311942 1.0598852355334492 0.9759156766003207 0.20723277993241318 0.042600117475491174 0.6450742152623801 2.282031691062538 0.006303892407368513 0.06652739913213031 2.3563153822410862e-06 5.627766581626762 -0.08396955893312841 VTQSNFAVGYK ddPTM_A549_PD325901_60min_R1 2 VTQSNFAVGYK 11 0 P21796;C9JI87 P21796 VDAC1 Voltage-dependent anion-selective channel protein 1 0 ; 145.55 5.9151e-11 8020900.0 10382.0 9044.5 9587.8 10816.3 11807.5 11659.5 10852.2 11102.3 11840.5 10680.7 12138.7 False True 11435.972997175555 9806.711756675517 10238.485764125078 11484.398285400399 10978.181933663658 11564.548897694898 11265.1864095517 10880.85591691414 11342.8849614479 10006.318779220333 10645.716853559212 1.0742323090579038 0.9211884828025284 0.961746954663933 1.0787811138862657 1.0312299382632266 1.0863100209008931 1.0581895577830795 1.0220876683636682 1.0654881317509024 0.9399384669783786 1.0 13.377985479762765 -6.248151653681614 24.899698434995262 1.0393999727658687 0.9792691701437248 0.14803226073769682 0.05160591569368139 759.1515797077221 1422562.5702303508 0.005962933664769035 0.015656079965244242 5.647397357986892e-07 6.248151653681614 -0.060130802622143875 VTQVDGNS(ph)PVR ddPTM_A549_MK2206_60min_R1 2 VTQVDGNSPVR 11 0 B0YIW6;P48444-2;P48444 B0YIW6 ARCN1 Coatomer subunit delta 1 VTQVDGNS(1)PVR;VTQVDGNS(1)PVR 106.55 0.00015499 17653600.0 4364.799999999999 5103.4 4066.6 4012.9 6150.0 4644.9 4092.3 4150.1 7599.6 6366.2 5923.5 True False 5101.471530885562 5363.141261616169 4643.30502900592 4996.060680145927 5245.343146855739 5136.4202349649195 4835.817938410796 4738.389384148213 5878.302734067466 4928.070998482077 4452.531469716809 1.1457463165802233 1.2045150715031951 1.0428460889241609 1.1220719525793017 1.1780586353024374 1.1535954927886467 1.086082820817966 1.0642012114626527 1.3202158758557498 1.1068020590083585 1.0 12.120410092742251 VTREY(ph)T(ph)QNKK ddPTM_A549_PD325901_60min_R1 1 VTREYTQNKK 10 2 E5RIJ3;D6RCM8;O95379-3;O95379-2;O95379;O95379-4 E5RIJ3 TNFAIP8 Tumor necrosis factor alpha-induced protein 8 2 VT(0.001)REY(1)T(1)QNKK 48.284 0.015231999999999999 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VTRS(ph)PPETAAPVEDMAR ddPTM_A549_MK2206_60min_R1 1 VTRSPPETAAPVEDMAR 17 1 A0A3B3IU28;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;Q9Y3L3 A0A3B3IU28 SH3BP1 SH3 domain-binding protein 1 1 VT(0.257)RS(0.712)PPET(0.031)AAPVEDMAR 45.221000000000004 0.0094226 4699600.0 1293.1 1913.1 1749.3 1687.8 1958.9 1759.6 1521.3 1447.6 2451.0 2842.5 2620.5 True False 1511.3436667403134 2010.4686184892234 1997.3770440269634 2101.3110757682216 1670.748404939138 1945.79970407205 1797.7005179738408 1652.8017330890702 1895.852413442727 2200.3772757980123 1969.7575278792763 0.7672739641043482 1.0206680721021426 1.014021784791666 1.0667866709617713 0.8482000354317396 0.9878371710892658 0.9126506651350741 0.8390889283050722 0.9624800954480328 1.1170802723962836 1.0 10.943802333198661 -9.504274661250884 1.8297791596847641 0.9894341440621885 0.9400560702753692 0.1354035574317075 0.09361956395481918 0.706939380613865 4.788251530299505 0.018689495548588238 0.01532889125431707 3.1313047640752823e-10 9.504274661250884 -0.049378073786819354 VTRS(ph)PPTQVAISSDSAR ddPTM_A549_MK2206_60min_R1 1 VTRSPPTQVAISSDSAR 17 1 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 VT(0.066)RS(0.932)PPT(0.002)QVAISSDSAR 84.602 2.7504e-05 19034000.0 3723.6 4694.2 4057.0 3483.7 4882.0 4066.5 3430.8 4009.2 6016.0 6250.1 5674.4 True False 4352.052646720467 4933.1147294506845 4632.343604651804 4337.206656389235 4163.864267146292 4496.814330875765 4054.1319510054886 4577.516377660059 4653.385605577907 4838.198069117031 4265.2898745270595 1.0203415886717495 1.1565719739031042 1.0860559870307627 1.0168609365313417 0.9762207000310821 1.0542810601763326 0.9504938867619204 1.0732017078130287 1.0909892979064828 1.1343187008253446 1.0 12.058428076928191 -6.18006897376904 6.00598108713067 1.0340590042024025 1.09566771148749 0.128496390331159 0.057560416707694344 0.28911551725899853 17.009707455088886 0.007329893299948027 0.01970513854877348 6.605885263457495e-07 6.18006897376904 0.061608707285087494 VTRS(ph)PPTQVAISSDSAR ddPTM_A549_PD325901_60min_R1 2 VTRSPPTQVAISSDSAR 17 1 Q6ZUT6;H0YM82;Q6ZUT6-3;Q6ZUT6-4 Q6ZUT6 C15orf52 Uncharacterized protein C15orf52 1 VT(0.066)RS(0.934)PPTQVAISSDSAR;VT(0.116)RS(0.877)PPT(0.007)QVAISSDSAR 94.389 9.9877e-07 80235000.0 9451.9 10147.4 10569.4 11335.3 12642.0 12085.900000000001 10721.8 12714.7 11634.7 12732.099999999999 13337.1 True False 10411.449929878981 11002.557010303397 11286.703042965399 12035.455736665868 11754.069532532361 11987.476437467369 11129.823966194086 12461.095334010812 11145.734019759124 11928.193033126223 11696.721250842722 0.8901169572737198 0.9406530919517885 0.9649458853396389 1.0289597809983495 1.0049029365118458 1.024857836686815 0.9515336586645773 1.0653494314154934 0.9528938734823743 1.0197894587140668 1.0 13.513816559096417 -5.539270703939595 1.9035627947956648 0.9896838700972449 0.8859013803820798 0.4914929357176463 0.03421487685857107 0.3398559114005925 1.8741030340401126 0.004855088838976363 0.050929791805873884 2.8888786285244137e-06 5.539270703939595 -0.10378248971516513 VTRS(ph)QEELREDK ddPTM_A549_MK2206_60min_R1 4 VTRSQEELREDK 12 2 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 VT(0.004)RS(0.996)QEELREDK;VT(0.012)RS(0.988)QEELREDK;VT(0.001)RS(0.999)QEELREDK;VT(0.143)RS(0.857)QEELREDK 166.62 1.6344e-15 147658000.0 13673.400000000001 14186.599999999999 13854.0 14311.199999999999 17387.4 14322.199999999999 13494.199999999999 13593.3 22133.9 20265.5 20613.1 True False 15981.135637465784 14908.637344132143 15818.705521036743 17817.44464245417 14829.736492949507 15837.765697693074 15945.921468245973 15520.191902735325 17120.606990575267 15687.509474998993 15494.29837738152 1.0314204133821863 0.9622015131640732 1.0209371948154033 1.1499355574863568 0.957109262501222 1.0221673361352681 1.0291476954854393 1.0016711647551337 1.1049617461586916 1.0124698190851624 1.0 13.919449806923396 VTRS(ph)QEELREDK ddPTM_A549_PD325901_60min_R1 3 VTRSQEELREDK 12 2 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 VT(0.028)RS(0.972)QEELREDK;VT(0.1)RS(0.9)QEELREDK;VT(0.044)RS(0.956)QEELREDK 144.3 1.7634e-12 148603000.0 16102.0 14882.099999999999 15656.8 16557.0 17119.6 16352.900000000001 15175.0 16598.8 18026.6 17564.2 18776.6 True False 17736.663186334106 16136.266795734498 16719.36459998681 17579.688286324745 15917.178355413796 16219.72740418671 15752.492929078626 16267.723912493302 17269.004691190137 16455.193414474877 16467.19723467422 1.0770905900724157 0.9799036572998048 1.0153133142039261 1.0675580085546073 0.9665991199703206 0.9849719519988245 0.9565983029528138 0.987886625796836 1.0486911916514603 0.999271046552229 1.0 14.007307404575613 -3.5668417078774635 15.240296002395995 1.013868193281563 1.012291933232571 0.0 0.038937748372097555 0.0 0.0 0.005164353384106501 0.0 0.0002711179625509978 3.5668417078774635 -0.0015762600489919176 VTS(ph)PEKAEEAK ddPTM_A549_MK2206_60min_R1 2 VTSPEKAEEAK 11 1 P56211;H3BMD8;P56211-2;H3BTD3 P56211;P56211-2 ARPP19 cAMP-regulated phosphoprotein 19 1 VT(0.432)S(0.568)PEKAEEAK;VT(0.204)S(0.796)PEKAEEAK 77.91199999999999 0.00030654 60251000.0 9190.2 9182.400000000001 7564.700000000001 8126.5 10690.7 10238.2 9440.7 11298.3 12628.4 10825.9 12411.1 True False 10741.281081182296 9649.744938798513 8637.488209541409 10117.49286481245 9118.112191884662 11321.599528432866 11155.952987599834 12899.868624592593 9768.087563410909 8380.321671085907 9329.081341065625 1.151376077502971 1.034372473131021 0.9258669630760001 1.0845111640603156 0.9773858602505373 1.2135813929069723 1.1958254601653557 1.3827587254287024 1.0470578191244646 0.8983008470723287 1.0 13.187519306795732 -4.390463265201041 3.284291014589641 1.0640001381519402 10.065195957287543 0.017666526647215575 0.1352437424034963 1096.1165599082003 112.28288927126252 0.01853440615561056 72483.47737545229 4.069459538771679e-05 4.390463265201041 9.001195819135603 VTS(ph)PEKAEEAK ddPTM_A549_PD325901_60min_R1 1 VTSPEKAEEAK 11 1 P56211;H3BMD8;P56211-2;H3BTD3 P56211;P56211-2 ARPP19 cAMP-regulated phosphoprotein 19 1 VT(0.162)S(0.838)PEKAEEAK 94.09 8.0476e-05 39722000.0 4094.3 4581.6 4254.2 3642.6 4337.2 4156.3 3832.5 4013.3 3952.1 3765.4 4650.0 True False 4509.950321935647 4967.7075111266 4542.915594582795 3867.5951290551748 4032.570034527718 4122.452470816876 3978.3478847244683 3933.251583127057 3786.006980797961 3527.6520013928175 4078.079478778647 1.1059005459320626 1.2181487724742408 1.1139840746662846 0.9483864032521233 0.9888404714798351 1.0108808551351525 0.9755444702406713 0.9644862498621618 0.9283798907057693 0.8650277709764798 1.0 11.993674177359031 -6.149820654513288 4.035125772965552 0.9699296569475468 1.162781813683869 0.767264793997846 0.04567660525401018 0.06488375209597153 1.8266516244173416 0.005067693587676746 0.014327377162429758 7.082381968051494e-07 6.149820654513288 0.19285215673632217 VTS(ph)PTKV ddPTM_A549_MK2206_60min_R1 1 VTSPTKV 7 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 VT(0.344)S(0.655)PT(0.001)KV 86.744 0.010459 124510000.0 11488.0 11830.0 10933.0 9564.1 16125.0 13782.0 12092.0 13810.0 16093.0 14840.0 15213.0 True False 13426.893545365963 12432.09646998458 12483.463798288918 11907.304929348762 13753.033860658334 15240.40209224882 14288.959878616763 15767.60979135125 12447.96119524023 11487.633693172389 11435.192242559593 1.1741729619020869 1.0871786154774645 1.0916706543706243 1.041285942271443 1.2026937168115266 1.3327630851300396 1.2495600926966486 1.3788670497962623 1.0885659752103953 1.0045859701787627 1.0 13.481192999348536 -8.97749244863953 13.991626590231808 1.0390457106844626 1.19210006251538 0.3663763550401178 0.09767988963214602 1.1745379606648776 729.2938267958027 0.019149251848222946 0.019781627345530836 1.0531919995044323e-09 8.97749244863953 0.1530543518309173 VTS(ph)PTKV ddPTM_A549_PD325901_60min_R1 1 VTSPTKV 7 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;Q05682-5;Q05682-4 E7EX44;Q05682;Q05682-5 CALD1 Caldesmon 1 VT(0.045)S(0.945)PT(0.01)KV 91.78299999999999 0.009933599999999999 232640000.0 12493.0 11603.0 11440.0 10257.0 12283.0 10573.0 11572.0 10478.0 10669.0 11050.0 12983.0 True False 13761.280163139485 12580.825530732043 12216.38719430849 10890.551594662857 11420.284454049604 10486.896993466977 12012.378792441381 10269.00807016802 10220.619032446904 10352.301114195208 11386.173306017892 1.2085957057992684 1.1049213104882871 1.0729142149849247 0.9564716171065931 1.0029958395252674 0.9210203210172794 1.0549970099341912 0.9018840477986207 0.8976342409126197 0.9091993276374728 1.0 13.47499534344874 -5.373691398199401 0.7656276828900713 0.9521077760193073 1.3340817864659418 0.7518042497061391 0.04732667168778081 0.8973841370568469 0.4090593070862351 0.008140253238087819 0.2821663079234419 4.229690616686228e-06 5.373691398199401 0.3819740104466345 VTS(ph)PTTYVLDEDEPR ddPTM_A549_MK2206_60min_R1 2 VTSPTTYVLDEDEPR 15 0 J3KNS1;Q9UPW5;Q9UPW5-2;Q9UPW5-3 J3KNS1 AGTPBP1 Cytosolic carboxypeptidase 1 1 VT(0.406)S(0.592)PT(0.002)TYVLDEDEPR;VT(0.031)S(0.929)PT(0.031)T(0.009)YVLDEDEPR 192.65 4.590699999999999e-34 11729000.0 3720.8 3964.1 3248.2 2757.0 4231.0 3488.3 2859.1 3739.7 5034.7 5095.8 4756.2 True False 4348.780075173891 4165.855757959921 3708.8436028173473 3432.4651237664343 3608.6255047718087 3857.429590653864 3378.561461210152 4269.813927350921 3894.3484887638106 3944.655240813199 3575.1042755578746 1.2164064989391923 1.1652403501740836 1.0374085108996167 0.9601021003033031 1.0093762941246527 1.0789698127201994 0.9450245925156818 1.1943187102380786 1.0892964760184847 1.1033678843388863 1.0 11.803769606451377 -5.671562444771283 3.825757856269504 1.041055461549451 1.2050960310177457 0.41107871495919546 0.06737257449778458 0.1520397063697574 4.122142003512031 0.00917652202227466 0.04073092361483414 2.1302842438802196e-06 5.671562444771283 0.1640405694682947 VTS(ph)RGPDEEAVVDLGK ddPTM_A549_MK2206_60min_R1 1 VTSRGPDEEAVVDLGK 16 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-14;Q9Y6M7-8 Q9Y6M7-13 SLC4A7 Sodium bicarbonate cotransporter 3 1 VT(0.426)S(0.574)RGPDEEAVVDLGK 135.76 6.0807e-11 28816000.0 4275.3 4215.7 3325.3 2908.8 5305.0 3655.1 2824.5 3223.5 4460.5 4647.6 4193.7 True False 4996.866118950481 4430.261123289431 3796.877542161359 3621.4561305809925 4524.641527491006 4041.8802559409846 3337.675089079809 3680.4409965547256 3450.2038719548273 3597.7039321016173 3152.2885497681036 1.585155051658603 1.4054110381536427 1.2044828645019423 1.148833957743939 1.4353513189088793 1.2822050367940852 1.0588101426582104 1.1675457174837232 1.094507630720747 1.1412990515624848 1.0 11.622183884896115 -2.0000000000001155 0.16988372817603511 0.968995955600411 3.1478356132574628 0.6134279527972242 0.10627208818306205 22.508057716388542 0.22836272800471902 0.12568309959459045 12.590879517861428 0.009999999999997341 2.0000000000001155 2.178839657657052 VTS(ph)RGPDEEAVVDLGK ddPTM_A549_PD325901_60min_R1 2 VTSRGPDEEAVVDLGK 16 1 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-14;Q9Y6M7-8 Q9Y6M7-13 SLC4A7 Sodium bicarbonate cotransporter 3 1 VT(0.077)S(0.923)RGPDEEAVVDLGK;VT(0.174)S(0.826)RGPDEEAVVDLGK 140.88 9.529899999999999e-15 114106000.0 29411.0 32006.0 31230.0 30843.0 38763.0 31171.0 33722.0 33087.0 31912.0 32496.0 32769.0 True False 32396.783068766163 34703.25794506678 33349.45560124599 32748.102060464695 36040.420605090345 30917.15371071212 35005.30916338647 32427.053828750613 30570.849616969328 30444.19701419794 28738.620739805916 1.1272908105813624 1.2075477894107576 1.1604403670999281 1.1395154401096654 1.2540762109425347 1.0758050635286305 1.2180580787198514 1.1283441234824412 1.0637549343008514 1.0593478820655309 1.0 14.810703203363103 -8.921842165854127 1.0169180103210358 1.0168744312796105 1.1719069289522555 0.5601689239532357 0.04873719640905071 0.18410697683800067 0.3875781374362392 0.010110283399603034 0.009848896375570886 1.1971755376331575e-09 8.921842165854127 0.15503249767264493 VTS(ph)TQQQTR ddPTM_A549_MK2206_60min_R1 1 VTSTQQQTR 9 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;A0A1B0GV30;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VT(0.26)S(0.737)T(0.003)QQQTR 115.04 0.00021009 56963000.0 6282.5 6627.3 6180.0 4799.3 8152.9 5926.1 5876.2 6121.2 7705.4 8021.8 9330.5 True False 7342.832407622015 6964.601262512999 7056.416927963549 5975.128715448767 6953.619210081323 6553.195968573188 6943.829477235184 6988.898845388795 5960.1392029953495 6209.669808617944 7013.4793413003545 1.0469600109010369 0.9930308372765103 1.0061221520123895 0.8519492857507913 0.9914649878746299 0.9343716078242805 0.9900691424789658 0.9964952494025594 0.849812042347913 0.8853907606244723 1.0 12.775914618075046 -6.036853426200891 24.288590553754272 0.9372437861227794 1.0148907640192322 0.29204297060005124 0.05419013290129248 440.3193116286777 290196.59457540716 0.008843351110193657 0.023407561841506316 9.186425847977924e-07 6.036853426200891 0.0776469778964528 VTS(ph)TQQQTR ddPTM_A549_PD325901_60min_R1 2 VTSTQQQTR 9 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;A0A1B0GV30;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VT(0.02)S(0.897)T(0.083)QQQTR;VT(0.104)S(0.819)T(0.077)QQQTR 149.95 2.3508000000000003e-05 129825000.0 11605.900000000001 11340.0 11145.1 11050.400000000001 12948.1 10922.2 10176.3 10409.0 11420.3 12850.9 13602.7 True False 12784.122424187988 12295.661597733464 11901.473506930719 11732.958110720721 12038.670124520038 10833.253224443868 10563.564665185031 10201.384329297469 10940.344506163034 12039.491980851686 11929.654134619841 1.071625571028793 1.0306804756435872 0.9976377665797249 0.9835120095118007 1.009138235582525 0.9080944931174308 0.8854879232860222 0.8551282555370205 0.9170713905622937 1.009207127465087 1.0 13.542264596471785 -5.999084863852152 0.9140222301076685 0.9441574005647396 1.0736806443479823 0.46671987378053714 0.047170471564934965 0.7764325165636538 0.8955218763264032 0.008544148547696662 0.07718657615339136 1.0021094005136568e-06 5.999084863852152 0.12952324378324265 VTSFSTPPT(ph)PER ddPTM_A549_MK2206_60min_R1 2 VTSFSTPPTPER 12 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 VTSFST(0.001)PPT(0.999)PER;VTSFS(0.003)T(0.014)PPT(0.983)PER 112.44 5.315e-05 23512000.0 8559.6 9663.6 7796.9 7517.8 11813.6 9546.0 8558.3 8400.5 14380.199999999999 12182.599999999999 14232.8 True False 10004.251217872086 10155.435963427137 8902.617661106638 9359.661337486872 10075.835089381291 10556.151383878036 10113.23232957045 9591.296600452291 11123.107660460673 9430.54219881684 10698.402954703353 0.9351163215883455 0.9492478462836819 0.8321445451998767 0.8748652838293095 0.9418074017254733 0.9867034760769803 0.9453029926419397 0.8965166708583973 1.0396979537558553 0.8814906522726252 1.0 13.385107828391394 -8.213979482826973 0.7980399937349014 1.0183284153788508 0.9062582798426857 0.0 0.060983944805671444 0.36813234753852103 0.4696968509027884 0.01068989541063531 0.01484704926482656 6.109708880384215e-09 8.213979482826973 -0.11207013553616507 VTSFSTPPT(ph)PER ddPTM_A549_PD325901_60min_R1 2 VTSFSTPPTPER 12 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 VTSFST(0.005)PPT(0.994)PER;VTSFS(0.001)T(0.004)PPT(0.995)PER 117.93 2.1974e-05 35262000.0 13379.5 13456.2 12140.2 13371.7 14901.6 12089.599999999999 11665.5 11891.6 15623.9 13947.8 15191.7 True False 14737.776990532686 14590.201198538003 12964.106976953137 14197.639539665914 13854.963023729184 11991.146305894104 12109.436986106533 11654.412709220273 14967.281816575802 13067.133527653556 13323.21720812077 1.1061725377823692 1.095095949471197 0.9730462826239334 1.0656314700785758 1.039911217185914 0.9000188256771239 0.908897362922642 0.8747446301570969 1.1233984692115462 0.9807791409186719 1.0 13.701654877105913 -5.657349527983389 7.863516883572441 1.0216621306417955 1.1029135576092914 0.12956483416967668 0.07760431277368465 0.413487132151246 27.789965132934594 0.012507702161215642 0.04887962436537009 2.201154221611936e-06 5.657349527983389 0.08125142696749599 VTSLRS(ph)PGASVSSSLTSLCSSSSDPAPSDR ddPTM_A549_MK2206_60min_R1 1 VTSLRSPGASVSSSLTSLCSSSSDPAPSDR 30 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 VT(0.159)S(0.146)LRS(0.686)PGAS(0.008)VSSSLTSLCSSSSDPAPSDR 71.735 4.4606999999999995e-05 3260700.0 783.57 1031.7 957.01 801.36 994.63 881.34 519.71 990.64 1635.2 1033.5 1132.2 True False 915.8174595527857 1084.209123253009 1092.7284084515206 997.6932359744175 848.321244578394 974.6028138138563 614.1345797647965 1131.0662537077624 1264.8298108778251 800.0316322030768 851.0434928696491 1.076111229597355 1.2739761626014487 1.2839865619169823 1.172317565827661 0.9968012818215954 1.1451856714485593 0.721625375095678 1.3290346065556526 1.4862105420874818 0.9400596313890323 1.0 9.733089052994984 -13.20628940734632 12.953299383274304 0.7847974721133977 1.1863548852188845 0.0 0.2108035591232087 0.0 0.0 0.0 0.030401813284921444 6.218857317092922e-14 13.20628940734632 0.40155741310548687 VTSSITIYPSDS(ph)SSPR ddPTM_A549_MK2206_60min_R1 1 VTSSITIYPSDSSSPR 16 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 VTSSITIYPS(0.003)DS(0.332)S(0.332)S(0.332)PR 79.00399999999999 0.00034932 1746300.0 1153.9 1173.8 1461.9 1077.9 1580.5 1163.0 1303.8 1257.2 1604.0 1647.3 1908.8 True False 1348.6501098535678 1233.5414062948346 1669.219402425552 1341.9855483887707 1348.0105436756892 1286.0678880630796 1540.683583339442 1435.411950013525 1240.6965610616621 1275.1737859004627 1434.7922798000236 0.9399619226007669 0.8597351851285131 1.163387499309797 0.9353169565254504 0.9395161673601772 0.8963443044468621 1.0738025322760847 1.0004318884497956 0.8647220775641378 0.8887514965428946 1.0 10.486626172368611 VTSSITIYPSDSSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VTSSITIYPSDSSSPR 16 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 VTSSITIYPSDS(0.006)S(0.184)S(0.809)PR;VTSSITIYPSDS(0.002)S(0.014)S(0.984)PR 238.02 3.1476999999999992e-65 18973800.0 7115.0 6218.299999999999 7349.9 6731.7 7805.2 7011.5 6816.700000000001 8212.0 8422.5 8284.400000000001 8944.099999999999 True False 7837.309562213833 6742.337964125747 7848.708412539158 7147.501820200053 7256.9896784782195 6954.400668655417 7076.113248741372 8048.205217810629 8068.531615032718 7761.321570175453 7844.032401321306 0.9991429358315321 0.859549988981435 1.0005961233940166 0.9112024854711304 0.9251605943463211 0.8865848982831799 0.9021014813183867 1.0260290633749716 1.0286203832704204 0.9894555724767379 1.0 12.93737977954057 -8.26576570701239 24.935196468923316 1.0148313535198885 0.9244657537315445 0.49052822637675264 0.04142629303481044 194.91837175579823 1123427.2069133755 0.006151096407282228 0.007563499603676377 5.422933676786771e-09 8.26576570701239 -0.09036559978834402 VTSSMS(ph)SPSMQPK ddPTM_A549_MK2206_60min_R1 3 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTSS(0.001)MS(0.494)S(0.494)PS(0.011)MQPK;VTSSMS(0.791)S(0.206)PS(0.003)MQPK;VTSSMS(0.498)S(0.498)PS(0.005)MQPK 255.54 6.668699999999998e-69 35447000.0 7200.700000000001 8609.5 7397.799999999999 7290.4 11214.7 8922.3 8379.5 8147.1 11522.599999999999 11234.8 11271.3 True False 8416.002119787321 9047.686775852264 8446.91927988491 9076.54832727849 9565.032486023252 9866.451863856597 9901.946683995133 9301.976374447342 8912.749497811168 8696.85087709253 8472.32513794531 0.9933521179557034 1.0679107126484157 0.9970013121962691 1.0713172806160405 1.1289737268443574 1.164550663862906 1.1687401655121714 1.0979248580518048 1.0519838831365564 1.026501076799051 1.0 13.04854224060004 -4.1567369935869625 16.098412133606367 1.0544329577809357 1.067566219658465 0.0 0.06316288218895372 0.0 0.0 0.009521368684708188 0.0 6.970485151658838e-05 4.1567369935869625 0.013133261877529279 VTSSMS(ph)SPSMQPK ddPTM_A549_PD325901_60min_R1 2 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTS(0.001)S(0.009)MS(0.504)S(0.151)PS(0.334)MQPK;VTSSMS(0.5)S(0.5)PS(0.001)MQPK 274.39 7.761799999999999e-84 38374000.0 12175.4 9325.1 10419.1 10110.1 13607.2 11427.7 11168.8 11713.5 11784.5 12959.6 13968.9 True False 13411.437644944255 10110.958903441298 11126.202781138076 10734.577915296966 12651.477214291608 11334.63660004186 11593.834795801864 11479.865053437015 11289.238446702646 12141.328644300835 12250.81385615291 1.0947385049205058 0.8253295676648551 0.9082011131489028 0.8762338601615091 1.0327050400767837 0.9252149884188384 0.9463726191528833 0.9370695847828355 0.9215092629158415 0.9910630254334419 1.0 13.580589974265786 -10.82747695180072 0.9530295521783649 1.001990529557951 0.9359245301998256 0.08250723244770586 0.06853069969196905 1.0768162533715673 1.64904510630391 0.050818021476768026 0.011112595474940104 1.4877263262753248e-11 10.82747695180072 -0.0660659993581254 VTSSMSS(ph)PSMQPK ddPTM_A549_MK2206_60min_R1 7 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTSS(0.003)MS(0.091)S(0.85)PS(0.056)MQPK;VTSSMS(0.182)S(0.749)PS(0.069)MQPK;VTS(0.002)S(0.002)MS(0.129)S(0.466)PS(0.401)MQPK;VTSSMS(0.018)S(0.934)PS(0.049)MQPK;VTSSMS(0.143)S(0.813)PS(0.044)MQPK;VTSSMS(0.009)S(0.519)PS(0.472)MQPK;VTSSMS(0.313)S(0.687)PSMQPK 251.3 1.1374999999999998e-68 64124000.0 16468.4 14623.0 14763.600000000002 13810.45 20017.0 15654.0 14472.099999999999 14127.599999999999 22746.4 24291.7 23432.8 True False 19247.863306276526 15367.248240117027 16857.300478589426 17194.01086997465 17072.52581635956 17310.495889715774 17101.493240103337 16130.230563960456 17594.376718536794 18804.18809868164 17613.789047620492 1.0927724440345097 0.8724555630006845 0.9570513438655459 0.9761676390860061 0.9692704829268945 0.9827809248149426 0.9709150707929953 0.9157728936318529 0.9988978902250268 1.067583360277723 1.0 14.10441767214867 -8.930654420343064 24.999690254059843 0.9995150726341548 0.9642146371065335 0.13311204373464025 0.05438609350031573 81.42066463637298 29351.95012673974 0.007865274325700297 0.008373191220380905 1.1731284837458623e-09 8.930654420343064 -0.0353004355276213 VTSSMSS(ph)PSMQPK ddPTM_A549_PD325901_60min_R1 6 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTS(0.001)S(0.002)MS(0.237)S(0.736)PS(0.025)MQPK;VTSSMS(0.229)S(0.754)PS(0.017)MQPK;VTSSMS(0.014)S(0.781)PS(0.204)MQPK;VTSSMS(0.036)S(0.758)PS(0.206)MQPK;VTSSMS(0.017)S(0.976)PS(0.007)MQPK;VTSSMS(0.285)S(0.708)PS(0.007)MQPK 194.3 1.1625999999999999e-27 163349000.0 23083.300000000003 22822.0 24720.7 22078.3 27377.300000000003 26426.9 22982.100000000002 24256.5 25836.0 26030.5 27895.8 True False 25426.69962297269 24745.290033815952 26398.39535964524 23442.02644754265 25454.412894557718 26211.688088210783 23856.69639178768 23772.685078643855 24750.20276711016 24386.92978760709 24464.793446045875 1.039317976628259 1.0114653160014893 1.0790361021385155 0.9581943333893739 1.0404507583803775 1.0714044304529884 0.9751439939356414 0.971710026126794 1.0116661242897358 0.9968173179712102 1.0 14.578419481833043 -7.779537393801271 24.999407427237575 1.000505965790097 1.0313069810218214 0.27865181599078415 0.03216952660464487 312.4090924310917 431539.39667000674 0.004841176218991854 0.006696467140369484 1.6613556248860106e-08 7.779537393801271 0.030801015231724405 VTSSMSSPS(ph)MQPK ddPTM_A549_MK2206_60min_R1 2 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTSS(0.001)MS(0.048)S(0.251)PS(0.7)MQPK;VTSS(0.001)MS(0.065)S(0.341)PS(0.593)MQPK 86.772 6.9975e-05 16301600.0 3140.7200000000003 3648.0 3275.53 3348.81 4363.0599999999995 3495.01 3452.04 3081.92 5192.7 5030.1 4702.9 True False 3670.796752768264 3833.667618132184 3740.049407775477 4169.268600333791 3721.259653710633 3864.849638400125 4079.2309840704743 3518.791597984161 4016.561741037967 3893.7969164438314 3535.040136563041 1.0384031329096062 1.0844764048024318 1.0579934776672033 1.179411955528002 1.0526781903326972 1.0932972439056217 1.1539419147971897 0.9954035773424973 1.1362139002311549 1.1014859141683164 1.0 11.787510880033885 -10.99847657747648 1.2264502787570362 0.9990920205664786 1.093029670372214 0.0 0.05873849892692664 0.44924545960467793 1.183113199925728 0.03596567861676989 0.00787059630032978 1.0035139695585532e-11 10.99847657747648 0.09393764980573538 VTSSMSSPS(ph)MQPK ddPTM_A549_PD325901_60min_R1 2 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VT(0.001)S(0.006)S(0.053)MS(0.283)S(0.283)PS(0.374)MQPK;VTSS(0.003)MS(0.303)S(0.303)PS(0.39)MQPK 66.435 0.0013898 9606900.0 1742.4099999999999 1502.24 1765.3 1399.8600000000001 1700.5900000000001 1663.51 1697.92 1969.1200000000001 1851.0700000000002 1679.08 1666.02 True False 1919.2981805055538 1628.8390369117376 1885.1038736112553 1486.3261728872722 1581.146425117009 1649.9629260949819 1762.5352747374745 1929.844356855244 1773.2759651693223 1573.0626022464137 1461.1101017709254 1.313589015762252 1.1147955482187946 1.2901860519110997 1.0172581594540917 1.0821541944036897 1.1292529728561584 1.2062987399794234 1.320806936120826 1.2136497879386632 1.076621536145563 1.0 10.512849181006064 -10.714766076643695 1.0227549660033008 1.002239447438176 1.1833289872712882 0.25693235340318954 0.09492574657884775 0.4750822761640383 0.9000914286489246 0.0601711280900407 0.016454008696627397 1.928563412572289e-11 10.714766076643695 0.18108953983311227 VTSSVPLPS(ph)GSTSSPGR ddPTM_A549_MK2206_60min_R1 2 VTSSVPLPSGSTSSPGR 17 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 VTSSVPLPS(0.245)GS(0.245)T(0.245)S(0.16)S(0.106)PGR;VTSSVPLPS(0.2)GS(0.2)T(0.2)S(0.2)S(0.2)PGR 103.21 1.4469e-08 156710200.0 4124.4 4220.9 4252.2 3099.0 4933.6 3699.6 3142.8999999999996 3622.4 6225.4 4983.1 5980.5 True False 4820.497888101268 4435.725781078439 4855.225899852202 3858.255139119397 4207.873975500398 4091.0892164042734 3713.924247643452 4135.886293134741 4815.356839920994 3857.414249086749 4495.376796596834 1.0723234349900463 0.9867305860626515 1.0800487077140648 0.8582718009400766 0.9360447779785477 0.9100659191686399 0.8261652839546242 0.9200310630836908 1.071179804897867 0.8580847443104112 1.0 12.134226330279231 -8.756654243305617 24.998489462338256 1.033612686552754 0.9455457234655053 0.0 0.09198790165782399 141.25927960361483 737965.2260473798 0.013601062011677085 0.015177107371467066 1.751240356135813e-09 8.756654243305617 -0.0880669630872487 VTSSVPLPSGSTS(ph)SPGR ddPTM_A549_PD325901_60min_R1 1 VTSSVPLPSGSTSSPGR 17 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 VTSSVPLPS(0.001)GS(0.003)T(0.012)S(0.607)S(0.377)PGR 175.69 4.1268e-30 239850000.0 4113.8 4097.2 4680.6 4604.1 5283.1 5410.4 4336.7 4472.9 5430.4 5034.1 5100.0 True False 4531.429947580501 4442.485423124652 4998.253662734292 4888.484800330236 4912.033281705568 5366.3394962124 4501.735491633294 4383.684500577832 5202.179172724688 4716.24606687512 4472.732331563678 1.0131234358923291 0.9932374874692196 1.117494473671509 1.0929526825990972 1.0982175810168164 1.1997899937679293 1.006484439022864 0.9800909546146004 1.163087523931036 1.0544440662350814 1.0 12.126940708222495 -5.74817478193713 24.617377613044223 1.0799700245280708 1.0031804096472077 0.17096775259322383 0.06452302158384937 298.6167498848018 554181.9143294931 0.010255010540681795 0.039236950570022806 1.7857687470779702e-06 5.74817478193713 -0.07678961488086311 VTSSVPLPSGSTSS(ph)PGR ddPTM_A549_MK2206_60min_R1 1 VTSSVPLPSGSTSSPGR 17 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 VTSSVPLPSGST(0.001)S(0.044)S(0.954)PGR 153.03 2.8036e-17 124830000.0 2828.6 3146.1 3200.1 3328.6 3925.0 3179.9 3253.6 3031.5 4668.5 4377.4 5206.7 True False 3305.998527369619 3306.223051920414 3653.92229954307 4144.1071494265325 3347.637699416059 3516.394907353216 3844.737004719443 3461.224408579385 3611.092204062574 3388.5422997636674 3913.732692390394 0.8447175081214888 0.8447748765133649 0.9336157031489447 1.0588631046479142 0.8553567559493747 0.8984760032769392 0.9823708737683845 0.8843793586897654 0.9226721618172201 0.8658083129571235 1.0 11.934329508043213 VTSSVPLPSGSTSS(ph)PGR ddPTM_A549_PD325901_60min_R1 1 VTSSVPLPSGSTSSPGR 17 0 Q15036;Q15036-2 Q15036 SNX17 Sorting nexin-17 1 VTSSVPLPSGS(0.001)T(0.004)S(0.481)S(0.515)PGR 169.21 9.275299999999999e-30 212020000.0 4300.6 4374.4 5110.7 4624.6 4519.2 4565.3 4403.3 4530.0 5675.2 4906.2 5053.2 True False 4737.193746065611 4743.046039958134 5457.542835135697 4910.251038771358 4201.786982393629 4528.121710420391 4570.869991078216 4439.64559628375 5436.69108003962 4596.42169470267 4431.688434874034 1.068936549958585 1.07025710621576 1.231481615943252 1.1079865182153599 0.9481232817110393 1.0217599402492963 1.0314059885412812 1.001795514627585 1.2267764667879122 1.037171669951414 1.0 12.113640742479163 VTTEIQLPSQS(ph)PVEEQSPASLSSLR ddPTM_A549_PD325901_60min_R1 1 VTTEIQLPSQSPVEEQSPASLSSLR 25 0 E9PMS6;Q8WWI1-3;Q8WWI1;Q8WWI1-4;Q8WWI1-2;J3KP06;F8WD26;Q8WWI1-5;E9PMT2;A0A0A0MTE2;E9PMP7;H0Y424 E9PMS6 LMO7 LIM domain only protein 7 1 VT(0.001)T(0.001)EIQLPS(0.225)QS(0.758)PVEEQS(0.01)PAS(0.004)LS(0.001)SLR 55.051 0.0013798 2550300.0 1166.8 941.03 903.73 1264.7 1426.7 1363.8 948.57 1728.0 1443.5 1518.9 1800.4 True False 1285.2526770472386 1020.3339006450725 965.0625523699651 1342.8176466579039 1326.4935138478033 1352.6936649664483 984.6683504274213 1693.533684410224 1382.8347149064691 1422.9963947829042 1578.9622136759303 0.81398570904055 0.6462053947888129 0.6112005366634041 0.8504431803543506 0.8401046601106666 0.8566979331426091 0.6236174253562706 1.0725612492445677 0.8757870852951806 0.9012225767392322 1.0 10.624760930974464 -7.642248842650509 0.2453261721821148 1.0149960766358854 0.6268111349311983 0.3513098075256057 0.11403436952775063 1.9665150792123425 0.28552479901861294 0.11289017950807265 0.2551615796500178 2.2790358527140886e-08 7.642248842650509 -0.3881849417046871 VTVDTGVIPASEEKAET(ph)PTAAEDDNEGDKK ddPTM_A549_PD325901_60min_R1 2 VTVDTGVIPASEEKAETPTAAEDDNEGDKK 30 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VTVDTGVIPASEEKAET(0.991)PT(0.009)AAEDDNEGDKK;VTVDTGVIPASEEKAET(0.71)PT(0.29)AAEDDNEGDKK 223.16 1.0944999999999997e-104 111107000.0 12025.900000000001 11898.0 12965.0 12814.5 14972.7 11665.7 12152.7 12425.2 12040.0 11661.8 12660.0 True False 13246.76051500033 12900.686216034637 13844.882864878455 13606.022561158929 13921.069205010872 11570.698406950503 12615.177648712606 12177.369638619171 11534.000670227842 10925.471957784763 11102.900258352185 1.1930901122015771 1.1619203915958862 1.2469609329745717 1.2254476077927263 1.2538227743276997 1.0421329686580239 1.136205617917067 1.0967737577808747 1.038827729858364 0.9840196438372981 1.0 13.438648960791978 -8.00378793915001 0.6685585077392703 1.0103091465978087 1.2168371316024202 0.7531405675381461 0.04696180678938639 0.22899557998058676 0.20957658564244638 0.010701888004381814 0.01748182555569268 9.913158745310153e-09 8.00378793915001 0.20652798500461156 VTVDTGVIPASEEKAETPT(ph)AAEDDNEGDKK ddPTM_A549_PD325901_60min_R1 2 VTVDTGVIPASEEKAETPTAAEDDNEGDKK 30 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VTVDTGVIPASEEKAET(0.002)PT(0.998)AAEDDNEGDKK;VTVDTGVIPASEEKAET(0.014)PT(0.986)AAEDDNEGDKK 199.86 6.489699999999999e-78 30560000.0 4594.4 4981.1 5103.6 4619.8 5635.8 5084.1 5420.3 5446.6 6558.200000000001 5082.1 5633.7 True False 5060.82010578148 5400.874778171971 5449.960986439926 4905.154553672953 5239.960850454514 5042.696775227986 5626.572482601969 5337.963290224959 6282.581660754834 4761.21533868339 4940.790614966722 1.0242935797463593 1.0931195428139688 1.1030544322058127 0.9927873767437502 1.060551085605923 1.020625476407069 1.1388000263678175 1.0803864616434289 1.2715741569220798 0.9636545463514765 1.0 12.270526201983651 -7.770767673513773 24.87915963297802 1.127870021854154 1.0514912226757556 0.0 0.0830962277096553 312.5828000515098 833677.5436113721 0.015525162730710269 0.021612363261784503 1.695244431481979e-08 7.770767673513773 -0.0763787991783984 VTVHS(ph)TPVRR ddPTM_A549_MK2206_60min_R1 2 VTVHSTPVRR 10 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 VT(0.001)VHS(0.586)T(0.413)PVRR;VT(0.001)VHS(0.947)T(0.052)PVRR 87.363 0.00030377 16080600.0 2344.85 2447.8 2595.9 2241.7 2271.2 2161.8 2074.25 1854.86 2826.2 3711.1 3835.2999999999997 True False 2740.6033539216023 2572.382564600868 2964.0376542557588 2790.9166006337377 1937.1094886404471 2390.5602411132973 2451.114375473107 2117.792085270512 2186.07021251401 2872.7599325291117 2882.8891611049 0.9506447181171666 0.8922932588969094 1.028148322261463 0.9680970875633969 0.6719333905636622 0.8292237777872418 0.850228447400208 0.7346075297805914 0.7582914535903191 0.9964864314894764 1.0 11.493299655036967 VTVHST(ph)PVRR ddPTM_A549_MK2206_60min_R1 2 VTVHSTPVRR 10 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 VTVHS(0.033)T(0.966)PVRR;VT(0.141)VHS(0.203)T(0.657)PVRR 78.548 0.00050419 18276800.0 433.95 630.5 463.25 478.229 688.65 507.1 648.63 378.64 761.1200000000001 907.59 1162.48 True False 507.19015094111745 662.5897569167605 528.9458158380446 595.3951264685155 587.3504972491385 560.7609854142631 766.4776749972864 432.31337953636734 588.7275352588857 702.5647886513696 873.8041331841631 0.5804391758744657 0.7582817839305332 0.6053368206334221 0.6813828223710519 0.6721763779129989 0.6417467761005395 0.8771733228180364 0.4947486091202236 0.6737522894444874 0.8040300588773902 1.0 9.771166119670145 -10.554849500420254 0.7287555445930187 1.0150153164306557 0.6661991172614852 0.36642109383568744 0.1087887327278929 0.3591887834533719 0.32158059245896964 0.07274326104587862 0.017444540504419112 2.7870868330448716e-11 10.554849500420254 -0.3488161991691705 VTVHST(ph)PVRR ddPTM_A549_PD325901_60min_R1 1 VTVHSTPVRR 10 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 VT(0.001)VHS(0.198)T(0.8)PVRR 84.605 0.00034033 17875000.0 867.93 699.61 707.9 539.92 796.61 675.64 724.17 887.52 786.88 755.64 981.78 True False 956.0416146637035 758.5685899815081 755.9423509485117 573.2696321527123 740.6588617553087 670.1378118477281 751.728685631029 869.8177173540287 753.8101700489107 707.9287614416705 861.0272840161936 1.1103499649910316 0.8810041261912457 0.8779540032953178 0.6657972898126312 0.8602037072513709 0.7783003213579056 0.8730602381432677 1.0102092390113735 0.8754776811866203 0.8221908580406336 1.0 9.74991514387907 -10.61135050663257 0.46572289017342505 1.0249194289602352 0.8657402299967003 0.0 0.11926386009781191 2.456312844156691 0.739574639387633 0.1799823822304729 0.02888698598735792 2.4470874704763644e-11 10.61135050663257 -0.15917919896353494 VTVLFAGQHIAK ddPTM_A549_MK2206_60min_R1 2 VTVLFAGQHIAK 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 0 ; 84.479 0.00051289 2478700.0 935.55 1143.94 1110.02 944.54 1752.6100000000001 1144.52 866.49 1036.58 1640.45 1333.31 1889.4299999999998 False True 1093.4479679985318 1202.1616598372077 1267.437527245648 1175.9523424020117 1494.8033906684282 1265.6323467291118 1023.9200169717697 1183.518389393112 1268.8906942603526 1032.1143449759895 1420.2323853848275 0.7699077835788473 0.846454194544697 0.8924155935947214 0.8279999488135701 1.052506199725473 0.891144547718629 0.7209524494080082 0.8333272790934315 0.8934387832006329 0.7267221587094895 1.0 10.4719112945415 -10.002211169805143 0.8312954743434097 0.9910531339712529 0.8600162284727272 0.0 0.11211437800432204 0.5418662089178097 0.757587538091981 0.03571242031767724 0.016692944589680465 9.949215326103807e-11 10.002211169805143 -0.13103690549852576 VTVLFAGQHIAK ddPTM_A549_PD325901_60min_R1 1 VTVLFAGQHIAK 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 0 75.045 0.00137 2448200.0 1024.9 951.89 1235.7 1402.6 1054.9 1163.6 1020.2 1001.7 1339.3 1353.2 1594.6 False True 1128.947093508498 1032.1091109582458 1319.562032867744 1489.235416464281 980.8074632074351 1154.12402739035 1059.0242692748611 981.7203076815516 1283.013878541207 1267.7587210614427 1398.4743090022425 0.8072705277753427 0.7380250779827452 0.9435725950583965 1.0649000892456815 0.7013410663991414 0.8252736714296689 0.7572711650530313 0.70199380951229 0.9174382899150918 0.9065298610783488 1.0 10.449638035354628 -9.004340573892218 4.3487996995801375 0.9658076861962558 0.8208276917846029 0.2159679748070107 0.10434046895581517 0.193688942155872 8.077594480567111 0.01955392166891669 0.019854174125758503 9.900552387041087e-10 9.004340573892218 -0.14497999441165288 VTVSRAS(ph)SSR ddPTM_A549_MK2206_60min_R1 1 VTVSRASSSR 10 1 P20700 P20700 LMNB1 Lamin-B1 1 VT(0.001)VS(0.017)RAS(0.877)S(0.079)S(0.026)R 44.426 0.015842 7024900.0 2337.9 2464.4 2240.3 1954.5 2978.8 1721.5 1673.0 1757.9 3550.5 3949.7 4395.3 True False 2732.4803638327894 2589.8274336965346 2558.008227138632 2433.3525877408388 2540.6224659924983 1903.6679873607852 1976.9624443372354 2007.0877083429666 2746.317418983436 3057.460026814215 3303.825705891157 0.8270655316230564 0.7838874275596713 0.7742564090403938 0.7365257142354241 0.7689940971953312 0.5762010943756185 0.5983858170278324 0.6075041140227417 0.8312537232476851 0.9254301827612638 1.0 11.689921863707852 -9.46125895429147 1.2259374747913652 0.9599072660317288 0.7121124280742409 0.5497811814277469 0.08551356442813125 0.2139277149657245 0.6656253590537402 0.02417426900303549 0.018858111354687693 3.4573316801205174e-10 9.46125895429147 -0.2477948379574879 VTVSRAS(ph)SSR ddPTM_A549_PD325901_60min_R1 2 VTVSRASSSR 10 1 P20700 P20700 LMNB1 Lamin-B1 1 VTVS(0.008)RAS(0.77)S(0.027)S(0.195)R;VTVS(0.004)RAS(0.966)S(0.026)S(0.004)R 90.861 0.0001821 42204000.0 4960.6 5163.9 6187.4 7577.4 6550.7 12381.7 9782.7 9570.599999999999 8762.6 8411.9 9684.6 True False 5464.196460199292 5599.079975708624 6607.314171858765 8045.438788475999 6090.601430688164 12280.867540339555 10154.986001798845 9379.706875009542 8394.338394762335 7880.771198416164 8493.455595737567 0.64334197060399 0.6592228466489561 0.7779300306431978 0.9472515276954642 0.7170934564895738 1.4459212039093603 1.1956247827910134 1.1043451948717715 0.9883301678736068 0.9278639429599328 1.0 13.052135924016078 -6.343980351430773 1.261714601569389 1.0401997805644951 0.6449497603331203 0.49864516197740616 0.1649312744532492 0.3464451301077646 1.0064162291941 0.025265729271711918 0.10463916120595541 4.5291807058707917e-07 6.343980351430773 -0.3952500202313748 VTYS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VTYSPR 6 0 Q96K76-2;Q96K76-4;Q96K76;Q96K76-3 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 VTYS(1)PR;VTYS(1)PR 122.74 0.015923 295720000.0 10267.599999999999 11354.7 9066.8 9351.8 13846.8 11425.2 10555.3 11148.0 15298.5 15360.8 15537.400000000001 True False 12000.519861281293 11932.605730155019 10352.608576449826 11642.991419818249 11809.954062745044 12634.207080566039 12473.061379983745 12728.263139318155 11833.414176684437 11890.784611461073 11679.034769575066 1.027526683330349 1.0217116367561923 0.8864267279535206 0.9969138417285379 1.0112097699641271 1.0817852099797907 1.0679873487899179 1.0898386202664987 1.0132185073642852 1.018130765603818 1.0 13.511633425112437 -6.7101879460223515 3.9401380820873584 1.0238029116189766 0.9775178318479429 0.2190698435731071 0.04611619253643605 0.3348623895763871 10.691352986981116 0.007252892827877852 0.015339522844786587 1.9490009642358213e-07 6.7101879460223515 -0.04628507977103369 VTYS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VTYSPR 6 0 Q96K76-2;Q96K76-4;Q96K76;Q96K76-3 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 VTYS(1)PR;VTYS(1)PR 122.5 0.016052 389370000.0 8824.6 8902.5 9210.3 8360.3 10485.099999999999 8935.900000000001 8604.3 9423.8 9520.3 9655.0 10347.6 True False 9720.46689567284 9652.744918326469 9835.366344033162 8876.696743381088 9748.662747631317 8863.128993088209 8931.741344953625 9235.834916171916 9120.194898735059 9045.38165226739 9074.910798840849 1.0711363572757595 1.0636738070813245 1.0837975779651132 0.9781580161112902 1.0742433687476607 0.9766629325128252 0.9842235965663144 1.017732859407458 1.0049900325080876 0.9967460675671621 1.0 13.14766774697682 -6.319132787092287 1.0959289770936513 1.0021371440168036 1.0776505032253292 0.49868189024818066 0.02826141019448712 0.3387009106543818 0.7084665942777854 0.003911816347413658 0.018900203342552126 4.79586790839402e-07 6.319132787092287 0.07551335920852553 VTYS(ph)PRK ddPTM_A549_MK2206_60min_R1 2 VTYSPRK 7 1 Q96K76-2;Q96K76-4;Q96K76;Q96K76-3 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 VT(0.005)Y(0.002)S(0.993)PRK;VT(0.051)Y(0.159)S(0.79)PRK 60.973 0.011871 28202000.0 3191.6 3559.3 3862.5 3272.6 4610.200000000001 3763.2 3413.3999999999996 3046.61 5054.7 5661.2 5270.0 True False 3730.2640528716947 3740.4531670005194 4410.260579977222 4074.3871469125957 3932.0456870950125 4161.41932619001 4033.5705962347374 3478.476297351819 3909.818520697247 4382.330988125842 3961.31355539927 0.9416735132686845 0.9442456686879235 1.1133328675701617 1.028544468881845 0.9926115749498381 1.0505150041753184 1.0182406769433794 0.8781118305090129 0.9870005153639415 1.1062822790568358 1.0 11.951763186085323 VTYS(ph)PRK ddPTM_A549_PD325901_60min_R1 1 VTYSPRK 7 1 Q96K76-2;Q96K76-4;Q96K76;Q96K76-3 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 VT(0.043)Y(0.161)S(0.796)PRK 41.028999999999996 0.046276 19176000.0 1426.8 1924.9 1744.3 1800.4 2113.8 2116.4 1696.6 1799.9 1764.7 1975.1 2382.5 True False 1571.6476856453544 2087.1180784371386 1862.6786873279973 1911.606618994931 1965.3339802141218 2099.1647400901834 1761.165041415143 1763.9995825057663 1690.5357959095568 1850.3918489273244 2089.467603911856 0.7521761441541136 0.9988755386920962 0.8914609079560414 0.9148773665674752 0.9405907880718831 1.0046409602906372 0.8428774095936822 0.8442339949196841 0.8090749015417001 0.8855805399725083 1.0 11.02891967527358 -11.095401975976365 1.4571778816787941 0.999453163668432 0.8839264287646775 0.0 0.07981334034792693 0.4787469287447971 1.8307456232461172 0.0527779682327309 0.011774063434661973 8.027827354374598e-12 11.095401975976365 -0.11552673490375442 VVAPVESHVPES(ph)NQAQGESPAANEGTTVQHPEAPQEEK ddPTM_A549_PD325901_60min_R1 1 VVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEK 38 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 VVAPVESHVPES(0.499)NQAQGES(0.499)PAANEGT(0.001)TVQHPEAPQEEK 94.949 3.7027e-09 15009000.0 1224.9 1080.8 1073.3 1161.8 1356.4 1308.1 866.02 1130.2 1220.6 1246.9 1698.3 True False 1349.2509462762791 1171.8828090679294 1146.1405922772117 1233.5617473607583 1261.1311433259693 1297.447267299173 898.9768650043279 1107.6572743752515 1169.302426750839 1168.170521202715 1489.419866410704 0.9058902574784286 0.7868048731564223 0.7695214882820465 0.8282162573361344 0.8467264146040439 0.8711091456204635 0.6035751806981989 0.7436836981666912 0.7850723984021352 0.7843124343559648 1.0 10.54053479063167 -10.546940526689689 0.8918225424293447 0.9975907012702666 0.7914878755314924 0.0 0.0973703837291026 0.37962051152911297 0.5497728016569434 0.04888518995242158 0.014369944240767662 2.838307686375686e-11 10.546940526689689 -0.20610282573877425 VVDES(ph)DETENQEEK ddPTM_A549_MK2206_60min_R1 2 VVDESDETENQEEK 14 0 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 VVDES(1)DETENQEEK;VVDES(1)DETENQEEK 148.91 2.5918e-13 5127400.0 1556.38 1838.04 1157.31 1343.83 1940.13 1646.4 1746.23 1869.3000000000002 2593.8999999999996 2303.6400000000003 2191.82 True False 1819.058894162315 1931.5883850964042 1321.4339603400479 1673.0684103268206 1654.7394470746692 1820.6209552081289 2063.497387432762 2134.2789994911573 2006.385791607137 1783.2461240525358 1647.5306028453929 1.104112355194302 1.1724142676077913 0.8020694474857373 1.0155006574307768 1.004375544962155 1.1050604778228688 1.2524789426484506 1.2954411868314422 1.2178139745276826 1.0823751139874145 1.0 10.686089548173554 -7.351884028686608 4.736057827568224 1.1347424509908013 1.0159774356280662 0.25472504338224244 0.1151654274660338 0.34824650006628355 13.368636304434308 0.020541231612149657 0.03329628814740655 4.447500149078958e-08 7.351884028686608 -0.1187650153627351 VVDES(ph)DETENQEEK ddPTM_A549_PD325901_60min_R1 2 VVDESDETENQEEK 14 0 O75717-2;O75717 O75717-2 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 VVDES(0.999)DET(0.001)ENQEEK;VVDES(0.993)DET(0.007)ENQEEK 137.68 2.7556e-09 8661300.0 2274.5299999999997 1786.24 1993.3 1671.69 2739.1000000000004 1464.48 1665.15 1937.62 1985.57 2530.3 2421.17 True False 2505.4386111795125 1936.772713609824 2128.577324686635 1774.9464946165497 2546.715065382014 1452.5537604267956 1728.5181944550418 1898.9726490665164 1902.1233979056717 2370.5364261763016 2123.3814390611824 1.1799286577013928 0.9121171909961385 1.0024469864574828 0.835905627677198 1.199367677673589 0.6840757546929571 0.8140403615938534 0.8943153661106293 0.8957992016482276 1.1163968859143814 1.0 11.052147841403123 -5.258668171939076 23.74886708085128 0.9309585023705708 1.179928833081201 0.21061895641895834 0.13581340769995884 132.9461579816848 1139194.7507208425 0.01600372292054495 0.15173451807800578 5.512287086457182e-06 5.258668171939076 0.24897033071063024 VVDLMAHMASK ddPTM_A549_MK2206_60min_R1 3 VVDLMAHMASK 11 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;; 47.288000000000004 0.0071375 7636800.0 5087.4 5944.3 6052.6 6487.0 7304.9 5921.4 5872.5 6039.800000000001 9263.3 7088.400000000001 8417.5 False True 5946.028745011735 6246.839479841869 6910.949692264114 8076.315291212496 6230.358886742514 6547.998617692791 6939.457235128754 6895.960146111746 7165.177340450432 5487.1255168923935 6327.202438818475 0.9397563619162597 0.9872988165380067 1.0922599298963866 1.2764433206155874 0.9846940961645532 1.0348963354672667 1.096765482411941 1.0898908661123035 1.1324400332903586 0.8672277471679957 1.0 12.627352040275754 -5.625739637598092 4.183600653311619 1.076401682883017 0.9500020738016787 0.13287354219897096 0.09722322443540694 0.22476466577333531 6.888040883763661 0.011041057069444915 0.04890520134472792 2.367338507175333e-06 5.625739637598092 -0.1263996090813383 VVDLMAHMASK ddPTM_A549_PD325901_60min_R1 5 VVDLMAHMASK 11 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;; 110.66 8.5403e-05 28794800.0 8801.800000000001 9684.7 9163.3 9357.9 13041.000000000002 11054.970000000001 9393.33 10180.0 11480.199999999999 11492.9 11753.300000000001 False True 9695.352256457314 10500.863657457605 9785.17664139921 9935.916229667104 12125.045149007647 10964.94198958362 9750.798313377401 9976.95191394449 10997.727117470902 10767.236332609415 10307.718610307333 0.9405914754757008 1.018737904521097 0.9493057592408857 0.9639297118308565 1.1763073486390145 1.0637603143938261 0.945970556823987 0.9679107755199983 1.0669409530129768 1.0445799637800144 1.0 13.331437438365707 VVDLMAHMASKE ddPTM_A549_MK2206_60min_R1 2 VVDLMAHMASKE 12 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 62.924 0.007383800000000001 7338200.0 1178.54 1169.2800000000002 1129.78 895.04 1688.37 1068.48 862.15 910.81 2009.6499999999999 1647.65 1986.27 False True 1377.4487394634064 1228.791357601316 1289.9997923745411 1114.3248401798721 1440.013009570214 1181.5458444003782 1018.7914951496393 1039.9201067386407 1554.467483751602 1275.4447206573768 1493.024340736794 0.9225896068001462 0.8230216508023697 0.8640179246762567 0.7463541013872305 0.9644939940226163 0.791377482712235 0.6823676395301599 0.6965191915260065 1.0411534770990312 0.8542692077129541 1.0 10.544021970545803 -8.778203584843231 24.99956624492783 1.0194336121382388 0.8114619170290509 0.2968209873564097 0.0959698153590986 125.53691055263081 187205.81719883048 0.01453826051763068 0.015497199295674903 1.6664658378564752e-09 8.778203584843231 -0.2079716951091879 VVDLMAHMASKE ddPTM_A549_PD325901_60min_R1 5 VVDLMAHMASKE 12 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;; 93.959 0.00026574 37518300.0 9474.86 9849.7 10812.980000000001 10519.939999999999 12566.84 12740.350000000002 11616.11 12732.6 13011.95 11891.99 12767.22 False True 10436.740812176728 10679.768786525157 11546.813846530926 11169.732801282786 11684.18851164445 12636.596813649578 12058.1674226293 12478.638304468539 12465.102991775011 11141.127721900293 11196.932878075762 0.9321071159239032 0.9538119860874363 1.0312479294343408 0.9975707564661537 1.043516884389185 1.1285766335522793 1.076917005213087 1.114469331945575 1.113260490842309 0.9950160319095296 1.0 13.450815975440962 -5.859426197489346 0.9793253509984301 1.0655011876401423 0.9141518651587639 0.5214976572617553 0.04396918762591015 0.6646029055189029 0.8401084531035783 0.00794295871169118 0.08460011260015407 1.3822092738347871e-06 5.859426197489346 -0.15134932248137845 VVDNS(ph)PPPALPPK ddPTM_A549_PD325901_60min_R1 1 VVDNSPPPALPPK 13 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 VVDNS(1)PPPALPPK 113.25 2.5355e-05 7397800.0 4985.0 5350.2 5845.3 5802.5 6384.6 5689.7 5194.4 5867.8 6006.2 6999.2 7484.8 True False 5491.073530236958 5801.08013052853 6241.99720864435 6160.907246566369 5936.167721674273 5643.364969614023 5392.075734484746 5750.762125799952 5753.780301123126 6557.269317509058 6564.217050056431 0.8365161432603379 0.8837428875814916 0.950912677177652 0.9385593437245354 0.9043222788654195 0.8597163875873831 0.8214347108522854 0.8760773877442877 0.8765371798718421 0.9989415748299619 1.0 12.68040722794134 -10.625481861600488 0.8728591991981318 1.000972100084417 0.8847198213581106 0.5930046650394787 0.036950168294783675 0.3861072089592065 0.5180363458108045 0.02867132239409507 0.007515985684891451 2.3687440608074052e-11 10.625481861600488 -0.11625227872630639 VVDVEEQQLEES(ph)GPHDLTETSYLPR ddPTM_A549_MK2206_60min_R1 1 VVDVEEQQLEESGPHDLTETSYLPR 25 0 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;A0A2R8Y7V5;K7EPC7 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 VVDVEEQQLEES(1)GPHDLTETSYLPR 133.23 3.1580000000000002e-24 8669500.0 5569.2 6349.9 6143.9 5674.1 8227.7 6093.6 5935.6 6373.0 9418.1 9141.0 8956.6 True False 6509.144806132672 6673.082787384202 7015.1974051319185 7064.254754720026 7017.416229168289 6738.4207073956895 7014.021688349129 7276.392266493957 7284.91538761524 7076.041751299781 6732.429030415389 0.9668345223879856 0.9911850176566175 1.0420009440038736 1.0492876676167744 1.0423305165885002 1.0008899725423368 1.0418263091466062 1.0807974705148886 1.0820634506065878 1.0510384467971423 1.0 12.716911401367136 -5.646577972156761 3.233013906841185 1.041163538127225 0.9705225542462347 0.5073367120876617 0.024820527302771903 0.20441552306401195 4.0281291223662254 0.004634746711837393 0.023093665517508365 2.2564308451173345e-06 5.646577972156761 -0.07064098388099038 VVDVEEQQLEES(ph)GPHDLTETSYLPR ddPTM_A549_PD325901_60min_R1 2 VVDVEEQQLEESGPHDLTETSYLPR 25 0 P38398;P38398-4;P38398-8;P38398-7;P38398-5;H0Y8B8;B7ZA85;E7EUM2;P38398-3;P38398-6;A0A2R8Y7V5;K7EPC7 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 VVDVEEQQLEES(1)GPHDLTETSYLPR;VVDVEEQQLEES(1)GPHDLTETSYLPR 281.19 1.6490999999999995e-153 34383000.0 3257.0 4291.9 3430.4 3248.3999999999996 4148.200000000001 3897.1000000000004 3571.4 4385.4 3492.6000000000004 4327.5 3736.3999999999996 True False 3587.648242323328 4653.593475424358 3663.207572670964 3449.0462903483312 3856.8447425131126 3865.3633096793883 3707.31158134507 4297.929756720251 3345.818167843667 4054.2609114642314 3276.8464869910817 1.0948478229194176 1.42014387732196 1.1179063734641572 1.0525504640027765 1.176998909721464 1.179598533231474 1.1313656578246534 1.3116054639064783 1.0210481879839046 1.2372446886234818 1.0 11.678092372054708 -8.870075006528182 9.150754142540505 1.009326559369765 1.1843455866225914 0.025070740748034614 0.11929250316693338 0.1929759846161895 15.12960727171827 0.01628298756251568 0.01731277154108439 1.348729924795143e-09 8.870075006528182 0.17501902725282648 VVDYSQFQES(ph)DDADEDYGR ddPTM_A549_MK2206_60min_R1 6 VVDYSQFQESDDADEDYGR 19 0 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGR;VVDY(0.001)S(0.003)QFQES(0.996)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(0.999)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR 473.64 0.0 1020219400.0 100007.87 102611.19 94038.72 86844.93 130804.9 106185.41 100396.07 106819.37 146743.41999999998 142520.01 140563.9 True False 116886.7534983287 107833.6612831714 107374.82454563519 108121.94174861716 111563.67248620317 117421.87960602972 118636.73637122063 121961.34281810066 113506.26967108932 110324.6407565544 105658.00426371685 1.1062744778576876 1.0205915021262775 1.0162488426114242 1.0233199320966773 1.0558941867550904 1.1113391779855206 1.1228371877544605 1.1543029197645218 1.0742798944771246 1.0441673730765335 1.0 16.68904253914604 -5.235509921595165 22.272823628311432 1.052102839524365 1.106274783545553 0.02757071389257071 0.048003742662946686 4014.2536406080085 3447910.8485656884 0.007779773922943434 0.6415315346586977 5.814201494290249e-06 5.235509921595165 0.05417194402118808 VVDYSQFQES(ph)DDADEDYGR ddPTM_A549_PD325901_60min_R1 8 VVDYSQFQESDDADEDYGR 19 0 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR 479.45 0.0 3816498600.0 75410.10000000002 81693.9 79928.20000000001 80621.9 97737.3 81270.3 82698.9 82379.40000000001 89246.6 93800.0 93842.7 True False 83065.67783801859 88578.53165776696 85352.60829931177 85601.73165738015 90872.56922338043 80608.46162188215 85846.05189407464 80736.27824161101 85495.8757654116 87877.45199199195 82300.64281788828 1.0092956141524088 1.0762799490372166 1.0370831305434245 1.0401101221869724 1.1041538208208141 0.9794390282011463 1.043078753151801 0.9809920734186872 1.0388239124036203 1.0677614291111168 1.0 16.32861607856279 -7.276385216190065 24.99940963763653 1.015279809926356 1.0530133990764559 0.21155293008589804 0.03338930096498761 803.9599181944487 1344755.1568045015 0.004235483447842346 0.006788346258968036 5.2919384439100896e-08 7.276385216190065 0.03773358915009983 VVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_A549_MK2206_60min_R1 4 VVDYSQFQESDDADEDYGRDSGPPTK 26 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK 311.32 6.428699999999997e-190 706102000.0 20840.199999999997 24234.9 25090.4 20775.5 33638.799999999996 21442.899999999998 20539.699999999997 18417.0 38962.7 39755.6 40896.7 True False 24357.516266028513 25468.352894372725 28648.596001517253 25865.49843264763 28690.577081048916 23711.973445354968 24271.497619816786 21027.66614969703 30137.710660646655 30774.782348536664 30740.92069850043 0.7923483003297521 0.8284837381469545 0.931936823964897 0.8414028547267737 0.9333024655454925 0.7713488375288532 0.7895501197854744 0.6840285089679431 0.9803776196630571 1.0011015171070619 1.0 14.907872754313633 -8.89833315962325 11.255280545174788 0.9913500801177498 0.8271377625874343 0.5694402909603449 0.06663850800667379 0.21355155229928455 22.1671982582218 0.011768781623771757 0.012521040071885486 1.2637665043677992e-09 8.89833315962325 -0.1642123175303155 VVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_A549_PD325901_60min_R1 6 VVDYSQFQESDDADEDYGRDSGPPTK 26 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDY(0.1)S(0.128)QFQES(0.771)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDY(0.014)S(0.334)QFQES(0.652)DDADEDYGRDSGPPTK 384.28 0.0 1568138400.0 34480.92 36501.04000000001 35051.969999999994 37662.689999999995 42147.909999999996 49609.49999999999 40761.3 45254.0 45962.53 46048.299999999996 46700.33 True False 37981.39761488831 39577.11074121105 37430.807468818646 39989.02882312499 39187.58620399592 49205.4966799773 42312.493576939225 44351.373468923804 44030.88470310357 43140.802479347934 40956.48546778296 0.9273597863948824 0.966320969418703 0.9139164906681833 0.976378426185543 0.9568102769663065 1.2014091570108756 1.0331085075701363 1.0828901201449848 1.07506501596039 1.053332628193481 1.0 15.321804300557693 -7.040936813834199 24.99974494072286 1.0515522396857815 0.9478344573101672 0.5759932303301675 0.05197825893824342 346.9168826141929 211858.47500480467 0.00814567619522152 0.014109816931892557 9.10045666931392e-08 7.040936813834199 -0.10371778237561424 VVDYSQFQES(ph)DDADEDYGRDSGPPTKK ddPTM_A549_MK2206_60min_R1 7 VVDYSQFQESDDADEDYGRDSGPPTKK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDY(0.001)S(0.003)QFQES(0.996)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDYS(0.001)QFQES(0.999)DDADEDYGRDSGPPTKK 253.0 4.2983999999999986e-125 1388275300.0 24242.100000000002 30630.500000000004 30938.600000000002 25764.99 41254.6 25576.099999999995 23819.0 22199.33 52113.700000000004 50834.2 55325.5 True False 28333.57381755888 32189.461616556462 35326.15870024162 32077.41370663437 35186.10298963816 28282.545925958853 28146.603981870037 25346.153010096852 40310.03015847831 39350.718914114805 41586.65144387896 0.681314143693318 0.7740335059194662 0.8494590805877734 0.7713391819950381 0.8460912761182919 0.680087117957214 0.6768182338473147 0.6094780928515343 0.9693021380400524 0.9462343696322475 1.0 15.343832903442145 -8.840982483462314 8.37909589124935 0.9861610956134643 0.7422991446667179 0.6842549490300678 0.07108700490237527 0.10514355734905839 9.897435896000648 0.012848057345097124 0.013660146361318268 1.4421735179957525e-09 8.840982483462314 -0.24386195094674645 VVDYSQFQES(ph)DDADEDYGRDSGPPTKK ddPTM_A549_PD325901_60min_R1 6 VVDYSQFQESDDADEDYGRDSGPPTKK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDY(0.001)S(0.013)QFQES(0.986)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK 272.46 2.7422999999999993e-139 1740117400.0 28923.9 28068.5 28127.9 32467.100000000002 35153.4 45064.2 35737.0 41877.200000000004 41666.1 41447.4 42445.299999999996 True False 31860.233035350222 30433.93100140933 30036.828440803307 34472.51902886598 32684.346456646377 44697.21209618787 37096.99109103675 41041.926393972135 39915.0187147658 38830.40409054247 37224.79718292546 0.8558873505418078 0.8175714390559256 0.8069037500244814 0.926063313641856 0.878026179592948 1.2007375587983031 0.9965666410145725 1.102542646298085 1.0722696088475752 1.0431327241281378 1.0 15.183976367940847 -7.097525593085297 8.313024983626615 1.047889108445802 0.8528428138734678 0.7482022407613784 0.06078036739760736 0.13249398730244277 10.247758846963388 0.009081904253920147 0.015768873401162814 7.98866862850946e-08 7.097525593085297 -0.19504629457233413 VVEAVNS(ph)DS(ph)DSEFGIPK ddPTM_A549_PD325901_60min_R1 2 VVEAVNSDSDSEFGIPK 17 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 VVEAVNS(0.884)DS(0.884)DS(0.232)EFGIPK;VVEAVNS(0.998)DS(0.635)DS(0.367)EFGIPK 106.6 1.1937999999999999e-08 10195200.0 4287.299999999999 4503.7 4370.3 4312.5 5004.6 5096.3 3962.1000000000004 4163.9 4045.05 4322.6 5127.8 True False 4722.5435398565505 4883.242604736524 4666.894838748812 4578.873330601885 4653.094160932725 5054.79742247288 4112.87988364431 4080.8477479836392 3875.0506155402923 4049.670298300469 4497.113107802398 1.0501278101418074 1.085861637828099 1.037753493602784 1.0181806018304576 1.034684707587119 1.1240094036556276 0.914560026633208 0.9074372047488538 0.8616751508466975 0.9005044350061765 1.0 12.134783454640441 -7.77712804553491 24.98061358526603 0.9291722976215505 1.0558333381982523 0.7407866349553424 0.04140084175207464 135.8095569223002 216245.18656391685 0.008788665608413654 0.01216518524863881 1.670597989698222e-08 7.77712804553491 0.1266610405767018 VVEAVNS(ph)DSDSEFGIPK ddPTM_A549_MK2206_60min_R1 1 VVEAVNSDSDSEFGIPK 17 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VVEAVNS(0.98)DS(0.013)DS(0.007)EFGIPK 125.89 1.6786000000000003e-10 4217400.0 1013.2 1347.5 1419.4 1004.8 1816.4 1071.1 1341.1 1423.0 2200.0 1682.7 1842.4 True False 1184.203389638301 1416.0819943621486 1620.6922633578429 1250.9760451071859 1549.2099661705297 1184.4430910613623 1584.7605105204207 1624.7146077547302 1701.7035126780904 1302.576901314096 1384.8812323467955 0.8550938246390779 1.0225295579769544 1.17027527379474 0.9033092628364267 1.1186590806384642 0.8552669091010973 1.1443295450216429 1.173179742642275 1.2287721668336955 0.9405693938871363 1.0 10.435546540466229 -7.84762770618472 24.184760186259247 1.1191735144143877 0.9994932792110863 0.1594032363867116 0.11926510850506132 23.010445916396023 6451.988533166767 0.01866022215214735 0.025782809404176567 1.420274513540886e-08 7.84762770618472 -0.1196802352033014 VVEAVNSDS(ph)DSEFGIPK ddPTM_A549_MK2206_60min_R1 1 VVEAVNSDSDSEFGIPK 17 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VVEAVNS(0.456)DS(0.542)DS(0.002)EFGIPK 143.14 3.1264e-16 2914300.0 1126.0 1240.6 1156.9 1102.7 1680.2 1250.7 1410.0 840.82 2131.0 1526.1 2243.3 True False 1316.0412719430776 1303.7412409689662 1320.965816174924 1372.861549502084 1433.0448057474807 1383.0482438525319 1666.1787486643752 960.0088099032555 1648.3319025077324 1181.3529500775192 1686.2266980696727 0.7804652087703456 0.7731707975335931 0.7833856608290657 0.8141619101830632 0.8498529927132427 0.8202030281194054 0.9881107626701394 0.5693236923613156 0.9775268677661664 0.7005896368678579 1.0 10.719582791401765 -8.954343736071525 24.99999921043496 0.9900857831359111 0.8034923167201146 0.0 0.12692930956476603 73.47957590369123 40235.32527909065 0.014616678624474464 0.015554796242469708 1.1108521602526646e-09 8.954343736071525 -0.18659346641579655 VVEAVNSDS(ph)DSEFGIPK ddPTM_A549_PD325901_60min_R1 2 VVEAVNSDSDSEFGIPK 17 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VVEAVNS(0.003)DS(0.986)DS(0.011)EFGIPK;VVEAVNSDS(0.993)DS(0.007)EFGIPK 176.81 3.24e-30 10924200.0 5523.2 4021.5 4760.700000000001 5335.1 6738.1 5502.2 5109.4 5901.4 5524.299999999999 5705.4 6712.8 True False 6083.911198035057 4360.405918455476 5083.789730414722 5664.637010108782 6264.839101183071 5457.391907448597 5303.841012970959 5783.6919474412625 5292.132882270735 5345.160070310348 5887.168155945229 1.033418960844722 0.740662709634354 0.8635373741245685 0.9622006472480795 1.0641515470993377 0.9269977963747107 0.9009154949336398 0.9824234324953892 0.8989267406820051 0.9079339894364105 1.0 12.523358120786261 VVELRPPS(ph)R ddPTM_A549_MK2206_60min_R1 3 VVELRPPSR 9 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 VVELRPPS(1)R;VVELRPPS(1)R;VVELRPPS(1)R 134.3 1.2912000000000001e-05 118930000.0 7322.6 8094.799999999999 7197.9 7180.9 10042.6 7856.1 7146.6 7567.2 11150.7 11423.7 11663.900000000001 True False 8558.475859618458 8506.790744313714 8218.670454011144 8940.220822362851 8565.346843351774 8687.427287542878 8445.04471291122 8639.873773578067 8625.084254008903 8843.078235895782 8767.431722736537 0.9761668103355519 0.9702716842667957 0.93740911978792 1.019708063329221 0.9769505043465925 0.9908748151427077 0.96322902532685 0.9854509332730046 0.9837640630427169 1.0086281268621768 1.0 13.097938575050017 -7.948695252587507 0.0036036616003229573 1.9636435469047395 2.3898623595613073e-06 0.2377163295285074 0.01875631385744262 11398.506479209167 22.688329555819916 6146.884287217367 6215.226647920898 1.125394393918031e-08 7.948695252587507 -1.96364115704238 VVELRPPS(ph)R ddPTM_A549_PD325901_60min_R1 2 VVELRPPSR 9 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 VVELRPPS(1)R;VVELRPPS(1)R 120.77 3.7692e-05 187086000.0 8887.599999999999 8832.5 8849.0 8313.0 10019.2 8644.6 8181.8 8906.4 8839.8 9578.400000000001 9451.2 True False 9789.862609294685 9576.845772661442 9449.546353359767 8826.475129807182 9315.485956363571 8574.201243707992 8493.162876252753 8728.75486506436 8468.293947232558 8973.61818934003 8288.762316093062 1.1811006560397033 1.155401181436642 1.1400431081264066 1.0648725096954612 1.1238693548103162 1.0344368576066822 1.024659961567825 1.053083021589005 1.021659642814335 1.0826246244167583 1.0 13.016940978211622 -5.280489738984375 0.302943026890416 1.0004786592010964 1.3357884434365728 0.7009806099980879 0.03185895871124691 1.5041594130562441 0.09838716190503338 0.0076195095041099465 0.185758595039394 5.242159864407167e-06 5.280489738984375 0.3353097842354764 VVELS(ph)PLK ddPTM_A549_PD325901_60min_R1 1 VVELSPLK 8 0 Q8TEK3-1;Q8TEK3 Q8TEK3-1 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 VVELS(1)PLK 82.749 0.0034783 1637700.0 1002.7 884.42 998.09 907.16 1292.2 1204.5 1300.9 1063.7 1281.7 1297.5 1416.2 True False 1104.4933658512732 958.9531772722604 1065.8263894027407 963.193212890158 1201.440329847993 1194.6909513507017 1350.4064613797952 1042.483669043493 1227.8346062318121 1215.5756285672649 1242.0163780314667 0.8892743971716697 0.7720938260026432 0.8581419764303122 0.7755076582941447 0.9673305047331303 0.9618962941891527 1.0872694477025506 0.8393477634294783 0.9885816547587464 0.9787114325286844 1.0 10.278468482656058 -6.8305668201085075 6.3772479883315745 0.9861326080906822 0.8228068892582149 0.569390621447794 0.06274015730762858 0.09854867699173613 7.034416932990553 0.008374531633892554 0.016017371799551962 1.477179186812919e-07 6.8305668201085075 -0.16332571883246727 VVES(ph)PDFSKDEDYLGK ddPTM_A549_MK2206_60min_R1 2 VVESPDFSKDEDYLGK 16 1 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein 1 VVES(0.997)PDFS(0.003)KDEDYLGK;VVES(0.894)PDFS(0.106)KDEDYLGK 101.64 3.3531999999999996e-07 41498000.0 3804.5 4195.3 4211.200000000001 3809.4 6349.0 4765.7 4500.6 4070.3 6090.299999999999 6342.3 5528.1 True False 4446.606588905365 4408.822850424878 4808.411483339825 4742.703171010465 5415.0705104694425 5270.003210784371 5318.300763289994 4647.2774897709605 4710.8567742106225 4909.570025081351 4155.320202201652 1.0700996247050656 1.0610067662388354 1.1571699049310664 1.141356848624468 1.3031656399428195 1.2682544194770156 1.2798774834421063 1.1183921487707855 1.1336928431447053 1.1815142482834577 1.0 12.020743937669556 -9.923008081490448 0.7616031328146915 1.011079655038076 1.1779774505744747 0.0 0.09213191563371496 0.48082380699100724 0.5710433882384577 0.03874549351837426 0.01813076789066533 1.1939658865589448e-10 9.923008081490448 0.1668977955363986 VVES(ph)PDFSKDEDYLGK ddPTM_A549_PD325901_60min_R1 2 VVESPDFSKDEDYLGK 16 1 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein 1 VVES(0.814)PDFS(0.186)KDEDYLGK;VVES(0.641)PDFS(0.359)KDEDYLGK 161.04 5.1465e-21 154053000.0 23338.8 23766.7 23979.2 23165.1 27132.8 23461.1 23802.6 25150.8 25513.6 25127.3 27293.2 True False 25708.13779488351 25769.603218240918 25606.57271064354 24595.955615240753 25227.085731078496 23270.04058010292 24708.4209682825 24649.147563579078 24441.35211793396 23540.757989748156 23936.309425849766 1.0740226213453055 1.0765904952085599 1.0697794825040987 1.027558391632363 1.053925452009522 0.9721649301112678 1.0322569168327553 1.029780620105098 1.0210994386435688 0.9834748361134387 1.0 14.546913109797964 -6.4699847895381675 1.1719526509910925 1.011747739834072 1.0787259629583097 0.6289592389968035 0.020740561509682436 0.23400380235677506 0.5961316849252541 0.0028705942996100093 0.01109307088135886 3.388560238155714e-07 6.4699847895381675 0.06697822312423773 VVEVGSK ddPTM_A549_MK2206_60min_R1 2 VVEVGSK 7 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 111.01 0.022803999999999998 50555000.0 9217.2 10116.1 9708.3 8207.2 11061.9 8606.4 8436.6 8020.6 12452.3 11695.0 12111.099999999999 False True 10772.838021095684 10630.966280643368 11085.082922613039 10217.964368435212 9434.709163610318 9517.123535534038 9969.421014880767 9157.544612057336 9631.873932236991 9053.091377469747 9103.57962064442 1.1833628605461795 1.1677786896634874 1.2176619950107443 1.1224117099238275 1.0363735537848198 1.0454265170539965 1.0951099930265735 1.0059278870138664 1.0580314924026748 0.9944540230020971 1.0 13.152218223983407 -6.597899911967716 2.9032133531750657 1.0331412408107343 1.1870702354914688 0.8463667450446306 0.02941628767022377 0.07529900604576921 1.2798148129175013 0.0044815751100555 0.010332812464937688 2.5240624039348173e-07 6.597899911967716 0.1539289946807345 VVEVGSK ddPTM_A549_PD325901_60min_R1 2 VVEVGSK 7 0 P14618;P14618-2;H3BTN5;B4DNK4;P14618-3;H3BQ34 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 112.17 0.02189 93972000.0 7656.2 7296.7 7358.299999999999 7721.1 8612.1 7719.7 8004.1 8037.099999999999 8059.799999999999 8090.5 8270.2 False True 8433.451787803451 7911.618516770879 7857.678487052454 8198.014811109624 8007.215806132106 7656.833322658374 8308.700405511578 7876.793735517022 7721.074634709498 7579.664449266633 7253.017829117242 1.1627507316950685 1.0908036769204792 1.0833667684515818 1.130290177724187 1.1039840235863112 1.0556755137041045 1.1455508039917257 1.0860022574183714 1.064532697508786 1.0450359599059673 1.0 12.824365679956829 -9.750728844213981 0.3872409682728317 0.9870146897956524 1.1161263930406602 0.5173074159794464 0.031185206723217593 0.5770335316999271 0.18209502825349733 0.02963343789857262 0.011137916803771835 1.7752975584238998e-10 9.750728844213981 0.12911170324500776 VVFENEQDNSS(ph)LTK ddPTM_A549_PD325901_60min_R1 2 VVFENEQDNSSLTK 14 0 Q2LD37-7;Q2LD37-4;Q2LD37;Q2LD37-2;Q2LD37-6;H7C0G8;H7C070 Q2LD37-7 KIAA1109 Uncharacterized protein KIAA1109 1 VVFENEQDNS(0.025)S(0.965)LT(0.01)K;VVFENEQDNS(0.235)S(0.765)LTK 258.81 3.9943999999999995e-70 14215600.0 6791.4 6446.5 6971.5 6333.0 8285.7 7594.8 6950.9 7567.7 8055.700000000001 8599.5 8194.599999999999 True False 7480.857928435566 6989.769178993715 7444.627913035102 6724.175026713452 7703.741016113233 7532.950466847917 7215.4203031784255 7416.7562867541965 7717.146943451365 8056.526102400146 7186.716149849353 1.0409285371027737 0.9725956936730044 1.0358872895225109 0.9356394334364246 1.0719417402167355 1.0481769851179974 1.003994056914252 1.0320090750919202 1.073807116149026 1.121030236120989 1.0 12.811116990438633 -6.789633326508518 24.99984839267986 1.0361744873993906 0.9974024295567551 0.22947775772378476 0.04286051169069662 263.72180685907557 233843.98018016762 0.005395405291105971 0.010197741473267456 1.6231799648276926e-07 6.789633326508518 -0.03877205784263549 VVFEQTK ddPTM_A549_MK2206_60min_R1 2 VVFEQTK 7 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3 P60174 TPI1 Triosephosphate isomerase 0 ; 96.492 0.032579000000000004 18991100.0 12236.2 15158.0 14855.3 14146.1 18641.8 15003.599999999999 13692.7 14232.099999999999 21741.0 20238.2 20577.2 False True 14301.371413632227 15929.477454947268 16962.00491747199 17611.895135042563 15899.615914643133 16591.27099341636 16180.486348820357 16249.543758978272 16816.69821324289 15666.376563959668 15467.313338171127 0.9246189755746707 1.0298800513490334 1.0966355013712805 1.1386525086796369 1.0279494290327167 1.0726666377457723 1.0461083961420257 1.050573128228851 1.0872410641440664 1.0128699290844054 1.0 13.916935002948565 -5.291704126423842 3.7565011013313274 1.0536169550797048 0.9149487790526573 0.5039685881487526 0.03803535874682999 0.1710257942115465 4.50918312826903 0.005965457812092168 0.06202489269811729 5.108529123009667e-06 5.291704126423842 -0.1386681760270475 VVFEQTK ddPTM_A549_PD325901_60min_R1 2 VVFEQTK 7 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3 P60174 TPI1 Triosephosphate isomerase 0 ; 109.01 0.02437 40285000.0 22636.0 22591.0 24993.0 24057.0 29930.0 29617.0 25873.0 27699.0 26549.0 26064.0 29458.0 False True 24933.99005625753 24494.822853121404 26689.175275118178 25542.9462525889 27827.820052894618 29375.808971485043 26857.611173248846 27146.52171555487 25433.23785663446 24418.314591889935 25834.8527496476 0.9651299466608201 0.9481309257106381 1.033068604406202 0.9887010582221072 1.0771425841888804 1.137061211695342 1.0395883202243217 1.0507712963808227 0.9844545313687294 0.9451694897786097 1.0 14.657031040437882 -5.756754088003308 24.993177069853243 1.0165407549831504 0.9566304155732132 0.20672161972994985 0.04999124215808637 158.39337556470156 844900.8908665417 0.007210610385873161 0.0262326288289802 1.750837790656758e-06 5.756754088003308 -0.059910339409937285 VVFPPGS(ph)PIPLRR ddPTM_A549_MK2206_60min_R1 2 VVFPPGSPIPLRR 13 1 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 VVFPPGS(1)PIPLRR;VVFPPGS(1)PIPLRR 58.21 0.0049964 4345500.0 2043.61 2854.1000000000004 2258.8 2358.4300000000003 3370.6 2298.5 2048.89 2140.13 3299.2 3279.6 3176.3 True False 2388.5214065324976 2999.361499153255 2579.131805321046 2936.245455873945 2874.789205006821 2541.725744379183 2421.1467917382647 2443.4999813732466 2551.9364677397984 2538.736082218877 2387.53704857964 1.0004122901269503 1.256257573442721 1.0802478675065532 1.229821944593796 1.2040815059674361 1.0645806505458295 1.0140771608878778 1.0234396081212223 1.0688573269503652 1.0633284554596487 1.0 11.221307404988448 -7.422209033905608 4.878751363741226 1.0315144787378383 1.159405519138256 0.4145235851306268 0.0685959757791233 0.1522411560914796 5.789078486137116 0.009554097307655 0.01535699402979789 3.782604771841267e-08 7.422209033905608 0.12789104040041765 VVFPPGS(ph)PIPLRR ddPTM_A549_PD325901_60min_R1 2 VVFPPGSPIPLRR 13 1 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 VVFPPGS(1)PIPLRR;VVFPPGS(1)PIPLRR 89.624 7.836199999999999e-05 8973000.0 3446.1000000000004 3288.1000000000004 3224.3999999999996 3599.3 3803.1 3730.5 3582.1 3256.1000000000004 3579.1 3957.2 4137.4 True False 3795.9455351152656 3565.1997265879545 3443.227173892332 3821.620586396611 3535.9833759827447 3700.1200448433324 3718.4187757003306 3191.154531138964 3428.682873655521 3707.3417166600216 3628.5260291395184 1.046139811215699 0.9825476510177932 0.9489327474133817 1.0532157012810195 0.9744958001090268 1.0197308811150494 1.024773901534373 0.8794630396783252 0.9449244255438374 1.0217211305327727 1.0 11.825167903874517 VVFQEFR ddPTM_A549_PD325901_60min_R1 1 VVFQEFR 7 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 76.035 0.049477 2270800.0 1474.5 1771.4 1487.3 1490.0 2009.7 1839.3 1604.0 1848.6 1817.5 1675.4 1677.3 False True 1624.1901545304709 1920.6820947288402 1588.2371218614512 1582.0339159644782 1868.5456050886173 1824.321350617971 1665.041097742478 1811.7282228013548 1741.1167955265018 1569.6149580744468 1471.002733280736 1.1041380942291557 1.305695802784266 1.0796969209698548 1.0754799295553397 1.270252979694506 1.2401889604577676 1.1319089081697242 1.2316280465099534 1.1836258058088975 1.0670374177849273 1.0 10.52258421193933 -10.5637391691664 0.7765061548750228 0.9949702646509714 1.1827110311437385 0.34485126841738456 0.07592808494103016 0.4904343007943212 0.5093896689473294 0.055044972952111346 0.013881833155157772 2.730617258719357e-11 10.5637391691664 0.18774076649276716 VVFRDPYR ddPTM_A549_MK2206_60min_R1 2 VVFRDPYR 8 1 P62917;E9PKZ0;G3V1A1;E9PKU4 P62917 RPL8 60S ribosomal protein L8 0 ; 107.59 0.0018355999999999997 8097600.0 2122.2 2457.9 2130.62 2005.37 2421.2 2123.2799999999997 2148.61 1881.5299999999997 3334.3 2899.7 2688.2 False True 2480.3754771914737 2582.996611460279 2432.773953892831 2496.6857400244803 2065.0446873442447 2347.9640802808035 2538.9846249416782 2148.242639443962 2579.086373782981 2244.6557560708866 2020.645749454328 1.2275162422019272 1.2783025486569393 1.2039586624967773 1.2355880493642717 1.0219726480516966 1.1619869939670855 1.2565213994720879 1.0631465906500888 1.2763674060529704 1.1108606031893775 1.0 10.980600701727292 -10.961273351234402 1.1620297097260892 0.9973799692452404 1.196453714991867 0.24559397869520116 0.08485158584324168 0.3723118944961188 0.8740598489200987 0.06077397087904689 0.01333787551632616 1.0932680309442599e-11 10.961273351234402 0.19907374574662662 VVFRDPYR ddPTM_A549_PD325901_60min_R1 3 VVFRDPYR 8 1 P62917;E9PKZ0;G3V1A1;E9PKU4 P62917 RPL8 60S ribosomal protein L8 0 ;; 99.305 0.0024389 10391500.0 3055.0699999999997 3081.05 2601.84 3694.44 3865.59 3726.12 3588.9 3379.91 3519.8300000000004 3508.1600000000003 3493.95 False True 3365.218457376336 3340.7008964459155 2778.4165085349277 3922.6371681179894 3594.084293961542 3695.7757141111497 3725.477553421433 3312.495043561899 3371.9037856385416 3286.65417889367 3064.216299973904 1.0982313674804862 1.0902301173955526 0.9067298899749962 1.2801436922554703 1.172921211205668 1.2061079742127292 1.2158011017215595 1.0810252016445803 1.1004131091095815 1.0725920944032772 1.0 11.581302423924178 -9.938838051689022 0.7575722581668919 1.0080020518991253 1.132352987320351 0.11908816450331605 0.09368573004641094 0.7183729110939592 0.8416054797349718 0.04332182305965755 0.019932063117705578 1.151229602162766e-10 9.938838051689022 0.12435093542122577 VVFVFGPDKK ddPTM_A549_MK2206_60min_R1 1 VVFVFGPDKK 10 1 P30041 P30041 PRDX6 Peroxiredoxin-6 0 62.823 0.011922 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VVFVFGPDKK ddPTM_A549_PD325901_60min_R1 1 VVFVFGPDKK 10 1 P30041 P30041 PRDX6 Peroxiredoxin-6 0 94.69200000000001 3.1838e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VVGAQSLK ddPTM_A549_MK2206_60min_R1 2 VVGAQSLK 8 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 129.65 0.0029592 17592700.0 14932.7 16581.4 14959.5 13908.8 19020.5 15536.099999999999 15420.4 14768.0 21635.0 19965.3 23780.0 False True 17452.974690536765 17425.32243511432 17080.98204431566 17316.45662438975 16222.609646303985 17180.11978997146 18222.087075109328 16861.409225103198 16734.70704399567 15455.124863496947 17874.76970538797 0.9764027720746485 0.9748557728193739 0.9555917265421865 0.96876529934649 0.907570274397103 0.9611379655869288 1.019430592698303 0.9433077741986619 0.9362194489672976 0.864633509590802 1.0 14.125637034193764 -7.533721029628617 24.97029720558463 0.9709574208647038 0.9558739218087355 0.0 0.04237320928335354 616.4710061986876 1419756.4280066234 0.005015767866909544 0.007443449508936556 2.926031319357166e-08 7.533721029628617 -0.015083499055968286 VVGAQSLK ddPTM_A549_PD325901_60min_R1 2 VVGAQSLK 8 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 141.39 0.0029278000000000004 35488000.0 20640.0 19827.5 18997.7 20094.2 24135.0 22930.0 20766.5 22433.0 25514.0 23341.0 24173.0 False True 22735.357605635065 21498.433009617303 20286.99816445056 21335.373096760675 22439.84086122994 22743.265682417285 21556.780521364817 21985.556216651956 24441.735307324987 21867.245276600006 21199.87424527231 1.072428890030099 1.0140830441204893 0.9569395520812901 1.0063914931721156 1.058489338267379 1.0728019147325443 1.0168353015665694 1.037060690185691 1.1529188817134437 1.0314799523622893 1.0 14.371768086495466 -6.800264481620482 5.235582230427556 1.0662744375768354 1.0084575361961043 0.10901640306068228 0.04597870054838274 0.27273201037506367 17.826501933155214 0.008877436964331535 0.017390330934267794 1.5839282999143036e-07 6.800264481620482 -0.057816901380731034 VVGGS(ph)LR ddPTM_A549_MK2206_60min_R1 4 VVGGSLR 7 0 P18031;B4DSN5 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type 1 VVGGS(1)LR;VVGGS(1)LR;VVGGS(1)LR;VVGGS(1)LR 75.243 0.01822 33577200.0 5888.65 9507.0 9335.9 6389.48 11802.1 7857.290000000001 7500.84 9834.7 10945.9 10225.5 11945.900000000001 True False 6882.510156330023 9990.86569231981 10659.871002876198 7954.902886834652 10066.026724147332 8688.743212553018 8863.645535554395 11228.798842505588 8466.671127010508 7915.552448081826 8979.40333993247 0.7664774479750436 1.1126424901629317 1.187146918266884 0.8859055090507246 1.1210128716885361 0.9676303517755068 0.9871085193530301 1.250506121333228 0.9428990776434129 0.8815232091068262 1.0 13.132403869147563 VVGGS(ph)LR ddPTM_A549_PD325901_60min_R1 2 VVGGSLR 7 0 P18031;B4DSN5 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type 1 VVGGS(1)LR;VVGGS(1)LR 105.81 0.009706200000000002 70596000.0 13893.9 11128.8 10450.9 11093.9 14720.900000000001 10197.2 9527.4 9625.6 10219.2 10245.6 11082.1 True False 15304.398499851408 12066.663032526994 11160.160920367005 11779.145006925055 13686.954768348032 10114.157384070886 9889.97042059332 9433.609856862884 9789.722562225272 9598.691067474969 9719.071955219966 1.5746769414163713 1.2415447779503446 1.1482743385157317 1.2119619096552376 1.4082573759521326 1.0406505302842959 1.0175838255093446 0.9706286670504827 1.0072692750224326 0.9876139524123656 1.0 13.246602846484613 -7.360450250202608 5.784510020805469 1.0028705853227862 1.2969127613595046 0.6819760897330075 0.10618836802966959 0.10740101116912562 5.180799450535378 0.015358258384473121 0.02469041146034663 4.3606351358493245e-08 7.360450250202608 0.29404217603671845 VVGKPAQLGTQRS(ph)QEADVQDWEFR ddPTM_A549_MK2206_60min_R1 1 VVGKPAQLGTQRSQEADVQDWEFR 24 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VVGKPAQLGT(0.225)QRS(0.775)QEADVQDWEFR 47.919 0.0021768 5517600.0 1806.9 2199.5 2122.9 1424.4 2480.5 1253.9 1564.0 1499.1 2741.3 3009.2 2952.5 True False 2111.8605455363654 2311.445155175916 2423.9591418080618 1773.3780639437455 2115.621735898481 1386.5868657285437 1848.1585552560887 1711.6020158012059 2120.399926956568 2329.4196300198346 2219.3127651454142 0.9515831110888923 1.041513927859765 1.0922115980571303 0.7990663108845544 0.9532778656188465 0.6247820890795857 0.8327616477864909 0.7712306452169025 0.955430870428772 1.0496130453551489 1.0 11.115897283845264 -6.242706293149949 24.56152288933179 0.9164850589973905 1.0297439757747844 0.1857989107315745 0.12236473336408808 1103.573524046397 1446925.4760335458 0.018389615254132293 0.04855320942434263 5.7186524982564e-07 6.242706293149949 0.11325891677739386 VVGQT(ph)TPESFEK ddPTM_A549_PD325901_60min_R1 1 VVGQTTPESFEK 12 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 VVGQT(0.487)T(0.487)PES(0.026)FEK 132.59 6.053e-08 36767000.0 5635.8 5586.7 5646.1 5999.4 7034.4 5931.5 6347.7 6593.0 6686.1 6129.6 6333.9 True False 6207.942267143326 6057.510815525352 6029.278298757439 6369.969312374023 6540.328011362576 5883.195830582554 6589.265197094718 6461.497442891554 6405.106468539068 5742.57600991592 5554.870453900229 1.1175674245984542 1.0904864237242842 1.0854039439433039 1.1467358897454556 1.1774042375318454 1.0591058566364582 1.1862140173706863 1.1632129851659738 1.1530613579011306 1.0337911671520434 1.0 12.43953755132686 -10.734714942710243 0.9661870121666384 0.9992612655847117 1.131372703917497 0.55096559961035 0.0393478303317482 0.30253040917025165 0.497427711247434 0.02764843096860814 0.006967948469208865 1.8419806231393576e-11 10.734714942710243 0.13211143833278527 VVGQTT(ph)PESFEK ddPTM_A549_MK2206_60min_R1 2 VVGQTTPESFEK 12 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 VVGQT(0.085)T(0.915)PESFEK;VVGQT(0.091)T(0.901)PES(0.008)FEK 191.19 1.0847e-19 49434000.0 19031.2 18591.0 18066.4 18602.300000000003 25048.0 19662.9 19114.4 19176.2 28827.0 25972.0 28676.0 True False 22243.201291832225 19537.202491418724 20628.48718242083 23159.864335088976 21363.472380884967 21743.615026823332 22587.239059198837 21894.485074649503 22297.730527259686 20104.90716166261 21554.957782662117 1.031929708056478 0.9063901998051516 0.9570182131840453 1.074456492497414 0.9911164102612544 1.0087523829117848 1.0478906656624047 1.0157517029451335 1.034459485009756 0.9327277447898383 1.0 14.395732116419664 -6.214813254699423 24.98496610222722 1.0196015196513828 0.9592404083339635 0.17966667091583377 0.04367974346375465 317.1426465135774 169943.03111381456 0.004482822447484733 0.011860460502754987 6.097990526029907e-07 6.214813254699423 -0.06036111131741928 VVGQTT(ph)PESFEK ddPTM_A549_PD325901_60min_R1 1 VVGQTTPESFEK 12 0 Q02952;Q02952-3;Q02952-2 Q02952 AKAP12 A-kinase anchor protein 12 1 VVGQT(0.094)T(0.694)PES(0.211)FEK 134.91 4.2877e-08 41755000.0 10451.0 10397.0 10671.0 10169.0 13354.0 11268.0 10735.0 11093.0 12147.0 11081.0 12754.0 True False 11511.977826380433 11273.191678274672 11395.198229935819 10797.116034525363 12416.061108799027 11176.23714389349 11143.526299417394 10871.741412709853 11636.503832330354 10381.343768904715 11185.338854267282 1.0292024208089625 1.0078542836432598 1.0187620042989107 0.9652918141506451 1.1100299481818754 0.9991862821062126 0.9962618428109635 0.9719635278248374 1.040335387594534 0.9281206322099185 1.0 13.44932134233593 -11.307423376933532 1.8835790831945605 0.9999120933565535 1.0189479427048576 0.06918962911417958 0.04291426803205628 1.1923973970820552 7.632381652680544 0.02723652602429565 0.0053228659339488145 4.92693262111052e-12 11.307423376933532 0.019035849348304046 VVIGMDVAASEFFR ddPTM_A549_MK2206_60min_R1 1 VVIGMDVAASEFFR 14 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 115.33 1.1098e-05 1554700.0 1074.1 1290.3 1388.0 1436.7 1531.8 1600.6 1510.3 1501.5 1619.7 1492.5 1455.3 False True 1255.3818207762513 1355.970758683103 1584.8392711995805 1788.6915644959133 1306.4742491631891 1769.974429607709 1784.7019603601457 1714.3422231508966 1252.8405361294106 1155.3432134137322 1093.9088457632936 1.1476109966916732 1.2395646711650377 1.4487854973818517 1.6351376729638045 1.1943172908996584 1.618027348862582 1.6314905645678726 1.567171003132976 1.1452878738312238 1.0561604085096978 1.0 10.095276809589357 -8.903126947578723 4.647243839300715 1.0620408641248318 1.4398221797707962 0.48855771979254536 0.1690881634063698 0.13308896562218303 4.818487555174032 0.03150606833212828 0.033156098495445985 1.2498936234064645e-09 8.903126947578723 0.3777813156459644 VVIGMDVAASEFFR ddPTM_A549_PD325901_60min_R1 1 VVIGMDVAASEFFR 14 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 42.718 0.047596 2450900.0 3642.6 3545.1 3151.7 4376.1 3842.4 3609.4 3931.1 4012.8 4450.9 3651.8 4760.5 False True 4012.39407045961 3843.8580185295314 3365.593314711719 4646.40175815581 3572.5230795603848 3580.0062430927555 4080.7001616804587 3932.761556019297 4263.844151421687 3421.2247247799123 4174.988679295859 0.9610550779113318 0.9206870518216171 0.8061323211250838 1.1129136184722441 0.855696471053166 0.8574888504120565 0.9774158626865301 0.9419813700387291 1.0212828055238736 0.8194572458953172 1.0 12.027556570309647 -8.493686342753161 1.8761165724340176 1.0100528246402043 0.9226286467210405 0.0 0.09525261076492574 0.3781172396939775 2.6074747713513293 0.012939554575340332 0.015354395253893378 3.2085858007604527e-09 8.493686342753161 -0.08742417791916379 VVIT(ph)QSPGKYVPPPPK ddPTM_A549_MK2206_60min_R1 1 VVITQSPGKYVPPPPK 16 1 Q9H7F4 Q9H7F4 TMEM185B Transmembrane protein 185B 1 VVIT(0.606)QS(0.368)PGKY(0.026)VPPPPK 96.544 1.8938e-06 6346300.0 3005.3 3077.9 3156.2 3218.6 4825.6 3703.8 3311.5 2974.8 5150.7 4932.0 5288.9 True False 3512.521167469388 3234.5519632261658 3603.7966194237138 4007.157144488445 4115.760632433666 4095.733657616538 3913.156685249701 3396.4870099429163 3984.0746739777487 3817.8577745772386 3975.520163785804 0.8835375052215778 0.8136172953392771 0.9064968786353468 1.0079579474884397 1.0352760048673262 1.0302384314198163 0.9843131273476636 0.854350341593668 1.0021517964541773 0.9603416954981743 1.0 11.956927922069852 -6.074487247476559 3.636308315110541 0.9941142540409094 0.8493618283451031 0.5350907861102998 0.049322696401361034 0.11992515869154312 3.0329618892068995 0.00687506437879666 0.02068864735505552 8.423891267961229e-07 6.074487247476559 -0.14475242569580626 VVIT(ph)QSPGKYVPPPPK ddPTM_A549_PD325901_60min_R1 1 VVITQSPGKYVPPPPK 16 1 Q9H7F4 Q9H7F4 TMEM185B Transmembrane protein 185B 1 VVIT(0.5)QS(0.5)PGKYVPPPPK 131.71 1.5924e-10 12963000.0 3989.5 3827.3 4886.4 3955.4 5417.9 5713.9 4282.8 5236.6 5066.0 5456.6 5347.1 True False 4394.511103085327 4149.840002910517 5218.020488310227 4199.71607463483 5037.36539474032 5667.36789283751 4445.7842976380825 5132.151904966774 4853.093637489554 5112.069344770815 4689.440598059633 0.9371077447710202 0.8849328435096526 1.1127170457110185 0.8955686689735577 1.0741932410498278 1.2085381559545754 0.9480414997638804 1.0944059952673937 1.0348982007571725 1.090123488692032 1.0 12.19520011901479 -5.743885434071355 24.97478725193551 1.0308218201957509 0.9110202318682694 0.2740743747956125 0.08268471007794136 240.6803420314031 342421.06909329165 0.010288297662495323 0.03966784066267143 1.8034934357128678e-06 5.743885434071355 -0.11980158832748145 VVITQS(ph)PGKYVPPPPK ddPTM_A549_MK2206_60min_R1 1 VVITQSPGKYVPPPPK 16 1 Q9H7F4 Q9H7F4 TMEM185B Transmembrane protein 185B 1 VVIT(0.078)QS(0.495)PGKY(0.427)VPPPPK 103.85 2.8396999999999997e-07 6599500.0 2249.3 2498.4 2977.1 2742.6 3103.1 2750.3 2437.7 2264.2 4377.6 3785.9 3133.6 True False 2628.926849894818 2625.557888470793 3399.297546317197 3414.5371231199906 2646.6381006517126 3041.334920498615 2880.5985359001047 2585.1572838216857 3386.0805895907324 2930.662560578257 2355.4406370396855 1.116108302011317 1.1146780127605298 1.443168421594963 1.4496383689004262 1.123627596056933 1.2911957417534243 1.2229552681575695 1.0975259758915885 1.4375571756486099 1.2442099004717477 1.0 11.201781257624129 -11.064989479595674 1.3772481821071414 1.0000169324178505 1.276272963213836 0.005228519343771776 0.14999456594451616 0.3969280309286725 1.3435959619846785 0.10089745863070033 0.02234424533675649 8.610146092585092e-12 11.064989479595674 0.2762560307959856 VVITQS(ph)PGKYVPPPPK ddPTM_A549_PD325901_60min_R1 1 VVITQSPGKYVPPPPK 16 1 Q9H7F4 Q9H7F4 TMEM185B Transmembrane protein 185B 1 VVIT(0.12)QS(0.776)PGKY(0.104)VPPPPK 111.95 9.605299999999999e-08 12961000.0 4157.2 4004.3 4456.0 3883.6 5473.7 4852.7 4804.0 5230.2 5841.0 5005.9 5095.7 True False 4579.23588363111 4341.75641409207 4758.410956104773 4123.481151704463 5089.246195239867 4813.181220107556 4986.818848849671 5125.879557987476 5595.523082624652 4689.826619687763 4468.961204303731 1.0246756850834107 0.9715359376829766 1.064768911290233 0.9226934321411066 1.1387984729737157 1.0770246149087916 1.115878751430473 1.1469957611292563 1.2520858487730908 1.0494220928056686 1.0 12.125723805205805 -6.779754300591981 24.955445233007207 1.121414187189005 0.9990947586835173 0.392203076453444 0.06843789845543982 235.81141203212988 321310.33091314405 0.013576412716655202 0.02569131582782637 1.6605260740702788e-07 6.779754300591981 -0.12231942850548783 VVKPESNDKETEAAYES(ph)DIPEELCGHHLPQQSLK ddPTM_A549_MK2206_60min_R1 1 VVKPESNDKETEAAYESDIPEELCGHHLPQQSLK 34 2 Q8IYB7;Q8IYB7-4;Q8IYB7-5;Q8IYB7-3;Q8IYB7-2 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 VVKPESNDKETEAAY(0.027)ES(0.973)DIPEELCGHHLPQQSLK 100.22 1.555e-12 8326600.0 1257.4 1463.3 1214.3 1389.6 1808.7 1097.2 1129.0 1470.0 2094.4 2209.3 2086.2 True False 1469.6183795215145 1537.7757197403578 1386.5059992922556 1730.0520623815141 1542.642625970402 1213.3049757375848 1334.124685987291 1678.3770016861938 1620.0217440695435 1710.2175955745124 1568.1389638091 0.9371735626999068 0.9806374021885228 0.8841729153418602 1.1032517540276647 0.9837410214100121 0.773722867513219 0.8507694259102045 1.0702986408865955 1.0330855756140498 1.090603342589164 1.0 10.614837697122168 -8.275090560700706 24.93533086671547 1.0201609057559533 0.9333051049808583 0.2962873813236624 0.08335193936890178 954.1817747594624 1742910.2966058166 0.013772871180651573 0.01669398105954421 5.3077375377326974e-09 8.275090560700706 -0.08685580077509503 VVKPKS(ph)PEPEATLTFPFLDK ddPTM_A549_MK2206_60min_R1 1 VVKPKSPEPEATLTFPFLDK 20 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 VVKPKS(0.99)PEPEAT(0.01)LTFPFLDK 110.83 8.5147e-11 77563000.0 30931.0 37729.0 40259.0 38846.0 57153.0 39378.0 42661.0 40583.0 63325.0 49041.0 54562.0 True False 36151.39660965481 39649.2449464115 45968.33157004605 48363.27174386319 48745.86941012128 43544.95382299913 50411.95148707161 46335.76453022503 48981.98860924553 37962.604039546306 41012.749565407015 0.8814672752432915 0.9667541280834877 1.1208302797825318 1.1792252959469 1.1885540454287638 1.0617418798891736 1.2291775611550932 1.1297892733655637 1.1943112599931685 0.9256293333614137 1.0 15.323784847218585 -5.625779446341399 3.1986725319953258 1.1171057540240545 0.8936546009150478 0.4327431116281174 0.0861436901309396 0.16651290857276047 3.210958325313394 0.011699937227222295 0.06046659267880865 2.3671215197259983e-06 5.625779446341399 -0.22345115310900676 VVKPKS(ph)PEPEATLTFPFLDK ddPTM_A549_PD325901_60min_R1 1 VVKPKSPEPEATLTFPFLDK 20 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 1 VVKPKS(1)PEPEATLTFPFLDK 201.16 2.0268e-55 31590000.0 15006.0 15319.0 15976.0 13805.0 20138.0 17008.0 18164.0 19880.0 20241.0 19919.0 21769.0 True False 16529.398073166667 16609.985892035165 17060.227431492327 14657.70349657022 18723.576352328495 16869.492486984436 18855.240959722196 19483.477804441703 19390.34115997355 18661.3109406022 19091.551005060726 0.8657965017501777 0.8700176265213991 0.8936009141934071 0.7677586536937101 0.9807257853154681 0.8836103720704895 0.9876222709576665 1.020528808752997 1.0156503866466176 0.9774643734108099 1.0 14.220646692161084 -7.531002660226772 1.198569603239871 1.0093515578259484 0.8609985630477548 0.6346347323473338 0.04682056668944494 0.1806552978412716 0.5196543420893192 0.0070750372706375264 0.012989280011258859 2.944403598098114e-08 7.531002660226772 -0.14835299477819364 VVKPKSPEPEATLTFPFLDK ddPTM_A549_MK2206_60min_R1 2 VVKPKSPEPEATLTFPFLDK 20 2 Q9UPQ0-8;Q9UPQ0-10;E7EPK0;Q9UPQ0-6;Q9UPQ0-9;Q9UPQ0-5;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;G5EA03;E9PDJ9;H0Y8P3 Q9UPQ0-8 LIMCH1 LIM and calponin homology domains-containing protein 1 0 ; 103.1 5.143e-10 4043000.0 1268.1 1488.31 1541.24 1025.91 2145.5 1623.19 1253.76 1442.74 2066.21 1996.85 2176.0 False True 1482.1242779316308 1564.0586219140102 1759.8110074521924 1277.2579960548496 1829.8997921266637 1794.9548884136811 1481.5519630676936 1647.2528132059442 1598.2167340593628 1545.760198127445 1635.6391454551815 0.9061438044264775 0.9562369708868449 1.0759164161251809 0.7808922888669322 1.118767423249351 1.0974027452211432 0.905793901536511 1.0071003850592795 0.9771206188725665 0.9450496476698568 1.0 10.675638780811084 -5.5218948644997115 24.974432535047015 0.9917403340967796 0.9186670643474504 0.06976467833935829 0.08999215536198348 56.10487541228199 1424045.5934366821 0.011000341829975563 0.04375404316129464 3.0068041119993163e-06 5.5218948644997115 -0.07307326974932926 VVLASAS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VVLASASPR 9 0 O95671;O95671-2 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 VVLASAS(1)PR;VVLASAS(1)PR 135.43 4.5371e-05 29931000.0 3361.3 3528.0 3512.2 3172.4 4007.9 3134.8 3289.1000000000004 3293.6 5052.4 4446.799999999999 4795.6 True False 3928.6052641050305 3707.5601306936287 4010.2827725555985 3949.6381424144465 3418.343219233027 3466.522455288173 3886.686895199997 3760.4778862269704 3908.039467024901 3442.2647915632715 3604.720168173196 1.0898502743129639 1.0285292499063943 1.1125087622510055 1.0956850901455824 0.9482964168520683 0.9616620135717612 1.0782215300694746 1.0432093784779721 1.0841450333731235 0.9549325969754113 1.0 11.815671553099518 VVLASAS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VVLASASPR 9 0 O95671;O95671-2 O95671 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 VVLAS(0.248)AS(0.752)PR;VVLASAS(1)PR 137.95 4.3275e-05 44848000.0 4174.9 3862.0 4136.4 4368.200000000001 4806.6 4306.5 4796.6 4463.0 4702.9 4457.4 4899.8 True False 4598.732774601062 4187.46429369018 4417.120978193848 4638.013793098014 4469.000997869804 4271.429291815522 4979.137237800234 4373.98196384423 4505.253467775292 4175.959003295355 4297.155662391313 1.0701806347973732 0.974473494255479 1.0279173772671237 1.0793218020212507 1.0399904841666503 0.9940131629857053 1.1587053458122594 1.0178784078327208 1.0484268715711766 0.9717960742831192 1.0 12.069166323652556 -4.9039139998366785 19.79581431290674 1.0319858218335487 4.118901724948282 0.046335027855497146 0.05067182831948384 1056.5286402971692 228875.1245097186 0.006187664114610752 7559.130516627056 1.2476305489453897e-05 4.9039139998366785 3.0869159031147335 VVLDDKDYFLFR ddPTM_A549_PD325901_60min_R1 1 VVLDDKDYFLFR 12 1 P61604;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 136.99 2.5867e-08 22391000.0 10600.0 12470.0 12146.0 12949.0 15743.0 14496.0 14970.0 15730.0 14661.0 14607.0 15060.0 False True 11676.104196692433 13520.890663468806 12970.300599831373 13748.830320687262 14637.265990401596 14377.949382133478 15539.69154189833 15416.25281005372 14044.849155000855 13684.711527153786 13207.715473205675 0.8840366239248262 1.0237115336788156 0.982024531505396 1.0409696020919998 1.1082360170535195 1.088602295476598 1.1765616524238052 1.1672156961079663 1.063382171087306 1.0361149553013758 1.0 13.689093326035565 -4.539679041210414 0.913486288685997 1.0598049048751295 0.44079095658472367 0.47716146031245554 0.05784951815489844 5.866290503335807 1.4296910735057131 0.01060710118568936 4.968346566969872 2.8861636909139622e-05 4.539679041210414 -0.6190139482904058 VVLGDGVQLPPGDY(ph)STTPGGT(ph)LFSTTPGGTRIIYDRK ddPTM_A549_MK2206_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.335)S(0.208)T(0.22)T(0.233)PGGT(0.266)LFS(0.238)T(0.229)T(0.221)PGGT(0.048)RIIY(0.004)DRK 51.494 0.0029566999999999996 11142000.0 422.64 562.92 540.22 329.89 422.23 764.79 799.94 491.34 743.26 790.84 854.59 True False 493.97129944406925 591.5702235742787 616.8313192272606 410.713064809325 360.120526324699 845.7195701734852 945.2787434089227 560.9889496656423 574.9127967423261 612.1886947377665 642.3717175158752 0.7689804609616262 0.920915736860191 0.9602404688871076 0.6393697817170397 0.560610806025717 1.3165579167214574 1.4715447732730569 0.8733089181370728 0.8949846032536731 0.9530131511785265 1.0 9.327264564731728 -7.2475575705876265 24.99587486388189 1.009141911287656 0.781715452344641 0.3366575881518432 0.2052929683388627 1049.913540353814 1890496.107218976 0.0329983773336753 0.05697674439009095 5.6551278707962066e-08 7.2475575705876265 -0.22742645894301505 VVLGDGVQLPPGDY(ph)STTPGGTLFSTT(ph)PGGTRIIYDRK ddPTM_A549_MK2206_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.421)S(0.176)T(0.193)T(0.211)PGGT(0.037)LFS(0.149)T(0.142)T(0.666)PGGT(0.006)RIIYDRK 98.139 9.5243e-10 29645000.0 2810.2 4233.1 4362.5 3651.3 5601.0 3974.3 4033.8 2932.5 5958.2 5761.8 6122.4 True False 3284.493057206428 4448.546708968025 4981.1680984208715 4545.868663913084 4777.100319599835 4394.857788073175 4766.689245647065 3348.1908554046004 4608.677213290272 4460.205378256111 4602.039110356067 0.7137038557137125 0.9666468715916311 1.082382826171912 0.9877944439201785 1.0380399220966687 0.954980538558078 1.0357776479822787 0.7275450675484472 1.0014424264494552 0.9691802419104208 1.0 12.16805752899701 -5.267798162162247 4.923922550218919 0.9885249223042439 0.700716088700621 0.42492378542819875 0.08710595775137037 0.10798885118601653 7.833943171653617 0.011246698673670365 0.10484196649169547 5.3976141770145925e-06 5.267798162162247 -0.28780883360362297 VVLGDGVQLPPGDYS(ph)T(ph)TPGGTLFSTTPGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.288)S(0.305)T(0.305)T(0.305)PGGT(0.186)LFS(0.186)T(0.186)T(0.186)PGGT(0.028)RIIY(0.024)DRK 64.096 0.00032916 9511100.0 3842.4 3378.6 3640.6 3773.6 4372.5 3919.9 3515.2 3852.1 3838.8 3709.6 4172.4 True False 4232.477619374624 3663.3264791977317 3887.673008706249 4006.6867015325856 4065.390684306105 3887.9776340387034 3648.9728595912484 3775.266843586011 3677.468585786598 3475.375222915703 3659.2212510228023 1.1566607562173477 1.0011218857492648 1.0624317968255108 1.0949561195329913 1.110998872552397 1.0625150455037287 0.9971992971376931 1.0317131937651411 1.0049866716200053 0.9497581546741095 1.0 11.837320934037697 -7.670252975651872 4.431815035301422 1.0047172090778833 1.0803748875324808 0.5275127628323841 0.03984813406447151 0.13063746085625885 4.642254475921957 0.005258464239970843 0.007842127392904939 2.1367170935750837e-08 7.670252975651872 0.07565767845459748 VVLGDGVQLPPGDYS(ph)TTPGGT(ph)LFSTTPGGTRIIYDRK ddPTM_A549_MK2206_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.235)S(0.252)T(0.252)T(0.252)PGGT(0.245)LFS(0.245)T(0.245)T(0.245)PGGT(0.015)RIIY(0.014)DRK 50.261 0.0026176 6855400.0 645.01 421.64 884.18 508.32 764.67 657.11 582.91 606.13 1132.8 553.03 925.23 True False 753.871919019542 443.0996750299491 1009.5700193150187 632.8584228193517 652.188055952224 726.6449440456838 688.8172016907452 692.0507836952735 876.2226087098824 428.1001389039839 695.4698559510562 1.0839749739959914 0.6371227613079068 1.4516373508876672 0.9099724702717946 0.9377661021128741 1.0448259372104571 0.9904343025029985 0.9950837951831757 1.2599001972726 0.6155552756755449 1.0 9.441844174546 VVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.265)S(0.084)T(0.093)T(0.557)PGGT(0.002)LFS(0.38)T(0.351)T(0.263)PGGT(0.006)RIIYDRK 127.29 2.3941e-29 55474000.0 8000.4 8219.7 8685.1 8797.5 8991.3 9261.0 9535.7 10123.0 8302.6 9598.2 10313.0 True False 8812.594718416805 8912.402966039655 9274.52311374901 9340.90159442785 8359.782106301085 9185.581486474766 9898.586281635255 9921.088823660131 7953.670595069244 8992.168013960938 9044.56637949337 0.974352373420299 0.9853875345806111 1.0254248489763995 1.0327638940885389 0.924287771855499 1.0155911406986982 1.0944235319095224 1.09691149441438 0.8793866130611303 0.9942066470260825 1.0 13.14283562253897 -8.768897366857496 24.999999330396943 0.9430436851350227 1.0175102175682764 0.17847611355157156 0.0556106822003568 190.94243951701546 640058.5666128355 0.01113085037058578 0.011963212666598657 1.7025608126564563e-09 8.768897366857496 0.07446653243325374 VVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTRIIYDRK ddPTM_A549_MK2206_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.255)S(0.092)T(0.101)T(0.55)PGGT(0.003)LFS(0.111)T(0.103)T(0.481)PGGT(0.304)RIIYDRK 105.37 2.3082e-14 27161000.0 2691.6 3271.7 4373.0 2887.7 4191.6 3580.7 3175.4 2918.7 5629.3 5065.1 4825.6 True False 3145.8762766980344 3438.2155554394385 4993.157156308189 3595.186629633777 3575.0211925789436 3959.6072973237037 3752.329076956637 3332.4346631438725 4354.272538144899 3920.8903921352753 3627.2703402153147 0.8672847573063152 0.9478795989701021 1.3765605229225333 0.9911548609361074 0.9855954636032809 1.0916217777935628 1.0344773686578594 0.9187169277672474 1.2004268030064804 1.0809479372586637 1.0 11.824668557942047 -8.768031582968872 24.994317183183103 1.094645972793885 1.035572115198087 0.04527651260525578 0.13276338253788206 483.0635580629605 1831527.7406927692 0.024448414261666124 0.026328007574334292 1.705958322983361e-09 8.768031582968872 -0.059073857595798085 VVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTRIIYDRK ddPTM_A549_PD325901_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK 37 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.244)S(0.082)T(0.091)T(0.58)PGGT(0.004)LFS(0.147)T(0.135)T(0.707)PGGT(0.011)RIIYDRK 138.69 2.0247e-30 56166000.0 8942.3 9038.1 9752.3 11145.0 10300.0 10822.0 12129.0 11259.0 11617.0 12084.0 12822.0 True False 9850.115713026673 9799.772406214704 10414.14972334394 11833.401337868534 9576.56353307099 10733.869220022667 12590.575732243464 11034.430412485373 11128.777889205716 11321.014177731651 11244.975285354796 0.8759570797683516 0.871480119567511 0.926115839214613 1.0523279098069775 0.8516304651681442 0.9545480490297047 1.1196623747711698 0.9812765375177275 0.9896667272981549 1.0067620328588793 1.0 13.456992869857242 -7.528736584253085 24.99766991219944 1.0037457557729 0.9194318233157012 0.3888122085786314 0.06079426202318638 143.5508285485377 612584.7734599522 0.00906729612237542 0.013470330576458007 2.959807155285756e-08 7.528736584253085 -0.08431393245719876 VVLIGGKPDR ddPTM_A549_MK2206_60min_R1 2 VVLIGGKPDR 10 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 115.78 8.6679e-05 11048000.0 4200.700000000001 4756.8 4580.0 4218.7 5841.1 4326.6 4580.7 4412.1 5916.6 5808.6 5652.0 False True 4909.67546274537 4998.900802064468 5229.512868943865 5252.281689384641 4981.881927658379 4784.437940235359 5412.953896458801 5037.528686489562 4576.499546868727 4496.433225752099 4248.452412735613 1.1556385680648336 1.1766404131253139 1.230921841861126 1.2362811629100148 1.172634513387548 1.1261601815035092 1.2741001594444967 1.1857326379338815 1.077215678148995 1.0583696812215933 1.0 12.052721689894685 -8.953134373911336 1.802495565335749 1.0273529292620192 1.1975032102308432 0.716614660460209 0.04201244546780943 0.11509856314225406 0.7470788300953962 0.008723261306671318 0.008781267859168154 1.1139498159879458e-09 8.953134373911336 0.170150280968824 VVLIGGKPDR ddPTM_A549_PD325901_60min_R1 2 VVLIGGKPDR 10 1 P61978-3;P61978;P61978-2;Q5T6W2 P61978-3 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ; 121.83 4.1288e-05 34800000.0 8654.7 7535.9 8373.400000000001 8509.5 11136.7 9245.7 9829.7 9402.1 9703.1 11165.3 9827.2 False True 9533.318772746601 8170.976740243349 8941.66927734464 9035.112488523308 10354.496611529286 9170.406084602062 10203.77461251823 9214.56773969524 9295.31245043918 10460.321052517978 8618.516699753449 1.1061437953725055 0.9480722756477454 1.0374951501341796 1.0483372955327424 1.2014244413804407 1.064035309563698 1.1839362813800813 1.069159353135423 1.0785281010948313 1.2137031715465862 1.0 13.073223878564788 -4.8861370604763055 20.145938475917045 1.0565074218382515 10.871665162645423 0.0 0.0842241049463854 1832.7518028172901 328484.27253426024 0.009846328004414127 10784.074874607275 1.2997593178242414e-05 4.8861370604763055 9.815157740807171 VVLPIEAPIR ddPTM_A549_MK2206_60min_R1 2 VVLPIEAPIR 10 0 P00403 P00403 MT-CO2 Cytochrome c oxidase subunit 2 0 ; 95.90899999999999 2.3344e-06 1611600.0 599.23 630.02 617.57 805.71 737.97 515.89 797.53 697.36 823.32 1031.1 826.9 False True 700.3653742330822 662.0853269670062 705.150712330494 1003.1089861696968 629.4155905829474 570.4811373799331 942.4308776044672 796.2129155754309 636.8393345718754 798.173793869949 621.5579087209971 1.126790222449667 1.0652029644822696 1.1344891641416146 1.6138624770036818 1.0126419143762797 0.9178245974760958 1.5162398617752968 1.2809955507023116 1.024585683226722 1.284150330437241 1.0 9.279744998965088 -8.804256510706251 9.736038673019628 1.0114526326808742 1.208772616928466 0.0 0.21202087064625258 0.49296556404588443 107.82143671719858 0.03373462175995264 0.03593539532935041 1.5694355626729357e-09 8.804256510706251 0.1973199842475919 VVLPIEAPIR ddPTM_A549_PD325901_60min_R1 2 VVLPIEAPIR 10 0 P00403 P00403 MT-CO2 Cytochrome c oxidase subunit 2 0 ; 103.56 0.0010216000000000001 5794000.0 2660.7 2576.0 2434.0 2596.8999999999996 2874.8999999999996 3004.1000000000004 2502.6 2720.1 2742.6 2709.7 2971.5 False True 2930.8123052961846 2793.088560472788 2599.18587683102 2757.3046150121827 2672.9769418665787 2979.6356056061827 2597.837812475266 2665.8454716228316 2627.3380596484094 2538.609079559706 2606.024337890483 1.124629675434501 1.071781456474704 0.9973759028417215 1.058050216539481 1.0256914730237294 1.1433644583757532 0.9968586151340998 1.0229549405439446 1.0081786349605544 0.9741309943462201 1.0 11.347634842086917 VVLQELR ddPTM_A549_MK2206_60min_R1 1 VVLQELR 7 0 A0A0A0MSL3;G3V2F7;G3V113;H0YBP9;I3L0A0;Q13404-6;Q13404-8;Q15819;Q13404;Q13404-7;Q13404-2;Q13404-1 A0A0A0MSL3 UBE2V1;UBE2V2;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 0 84.244 0.03918 1118900.0 792.81 1015.7 963.34 674.5 1297.8 763.84 1088.3 937.88 1664.8 1386.0 1452.4 False True 926.6169456564755 1067.3947915945341 1099.9560976350178 839.7525302794561 1106.8953391852644 844.6690418040437 1286.0300228166234 1070.8273621370395 1287.7254581393124 1072.9016373811949 1091.728995799222 0.8487609555319423 0.9777103985528263 1.0075358462287365 0.7691950415448098 1.0138920404646206 0.773698459099446 1.1779755120227062 0.9808545584640435 1.179528493879204 0.9827545494436152 1.0 10.09239905947359 -7.769111693468113 24.99994603034127 1.0838376712189837 0.9063959757246235 0.3923338145003211 0.10112808132056261 126.19811809414288 411211.5087428065 0.015549793394391062 0.021703685043085945 1.7017207972353228e-08 7.769111693468113 -0.17744169549436017 VVLVLAGR ddPTM_A549_MK2206_60min_R1 2 VVLVLAGR 8 0 P61353;K7EQQ9;K7ERY7 P61353 RPL27 60S ribosomal protein L27 0 ; 97.596 0.0068025 3379500.0 1257.3 1428.76 1391.04 1352.18 1862.17 1497.58 1605.52 1481.68 2488.3999999999996 1934.94 1803.4900000000002 False True 1469.5015019662792 1501.4777812726272 1588.310388911718 1683.4641607016672 1588.2472598016825 1656.0529215868514 1897.2222018125021 1691.7126774546944 1924.781373158254 1497.8357101258066 1355.633659208164 1.0839960279716174 1.1075837274132392 1.1716368785350626 1.2418282397067297 1.171590310563246 1.221607998841047 1.3995095127105976 1.2479128605015875 1.419838877623128 1.1048971084125365 1.0 10.404751647908112 -5.857886384597675 2.1228728812881172 1.2224190895606108 1.0852693582537327 0.1681407172815237 0.11177875210105757 0.6611883203497229 5.693176929268137 0.022237991574592223 0.1094115998509235 1.3871186643186616e-06 5.857886384597675 -0.13714973130687813 VVLVLAGR ddPTM_A549_PD325901_60min_R1 2 VVLVLAGR 8 0 P61353;K7EQQ9;K7ERY7 P61353 RPL27 60S ribosomal protein L27 0 ; 143.18 0.0026969999999999997 6446600.0 2854.6 3022.0 3098.7 3441.2 3778.2 3516.6 3484.0 3477.7 3987.3 3376.2 3057.5 False True 3144.3968905545485 3276.6745457099205 3308.9964159968254 3653.755108467761 3512.832266082409 3487.9619755250123 3616.585526517953 3408.334545297127 3819.7276472092576 3163.0261558141033 2681.4468830894 1.1726493298766245 1.2219800311445048 1.234033922829156 1.3626058123732536 1.3100510355943122 1.3007760838083038 1.3487440490900728 1.2710803882753967 1.4245024472789107 1.1795967974461075 1.0 11.388795959891024 -10.938331659494244 1.180564916206705 0.9989631138468785 1.3053076414083582 0.41676847801218664 0.08412156354203211 0.21891930486566957 0.5392014767821587 0.05467316045144011 0.012638260979643656 1.152572731579041e-11 10.938331659494244 0.3063445275614797 VVNAFRS(ph)SLYEGLEKPESR ddPTM_A549_MK2206_60min_R1 1 VVNAFRSSLYEGLEKPESR 19 2 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 VVNAFRS(0.5)S(0.5)LYEGLEKPESR 82.177 3.8666e-05 4452700.0 1257.4 1967.6 1688.7 1476.2 2159.4 1727.2 1252.4 1339.2 2513.0 2384.0 2532.1 True False 1469.6183795215145 2067.742435700902 1928.1830527915945 1837.8690662691354 1841.7551205398831 1909.9711575774304 1479.9448686718179 1529.0357011279934 1943.8095124363822 1845.452744240093 1903.3096875951592 0.7721383383375642 1.0863930600350722 1.0130684803206476 0.9656174600736108 0.9676591952132337 1.0034999401441014 0.7775638816517217 0.803356233141406 1.0212786311682125 0.9696019288231708 1.0 10.894294606341077 VVNAFRS(ph)SLYEGLEKPESR ddPTM_A549_PD325901_60min_R1 1 VVNAFRSSLYEGLEKPESR 19 2 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 VVNAFRS(0.5)S(0.5)LYEGLEKPESR 79.762 5.8165e-05 16823000.0 2302.0 2537.0 2587.5 2777.9 3508.4 3069.1 3398.2 3170.2 2880.5 2657.2 3695.7 True False 2535.6973453571673 2750.801893602273 2763.103309901503 2949.484573931359 3261.9820873229364 3044.1062671568616 3527.520360566393 3106.9678740262125 2759.442602208578 2489.4239385194096 3241.152328972524 0.7823443911261669 0.8487110800109489 0.8525064635815598 0.9100110931430284 1.0064266520780945 0.939204936449831 1.0883537712911662 0.9585997690553318 0.8513770172237932 0.7680675530941738 1.0 11.662291111269361 -6.158209451965416 1.8675056425136143 0.9479766614892737 0.8129653457392054 0.2939947150292618 0.07985729743626353 0.31415548812293154 2.071114216360572 0.010613054709213018 0.03979963015600143 6.946892014010438e-07 6.158209451965416 -0.1350113157500683 VVNAFRSS(ph)LYEGLEKPESR ddPTM_A549_PD325901_60min_R1 1 VVNAFRSSLYEGLEKPESR 19 2 P20020-6;P20020;P20020-1;P20020-4;E7ERY9;A0A0U1RQU3;H0YHH6 P20020-6 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase 1 VVNAFRS(0.044)S(0.956)LYEGLEKPESR 118.57 9.7524e-15 16705000.0 2661.0 2555.5 3326.3 3287.2 4318.1 4072.4 3958.1 3630.6 3701.9 2963.9 3715.5 True False 2931.1427610753353 2770.860953528031 3552.0427206668114 3490.2428782271368 4014.8115526362935 4039.2357245999165 4108.727661455426 3558.1848348493972 3546.3220167040245 2776.758848177663 3258.517054495068 0.8995327359210457 0.8503441618344997 1.0900795242936752 1.0711138901091242 1.2320977565846802 1.2395932435056187 1.2609194896762952 1.0919644658421974 1.088323908512903 0.8521541553226405 1.0 11.669999830443794 -5.765557023081961 24.773987568730707 1.0907137503664477 0.8749384105806669 0.3777885053604192 0.11195201873341368 64.43449203371148 387686.731271669 0.014643953613975408 0.04806027688752924 1.71570642222263e-06 5.765557023081961 -0.21577533978578078 VVNANQNAS(ph)PNVPGK ddPTM_A549_MK2206_60min_R1 2 VVNANQNASPNVPGK 15 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 VVNANQNAS(1)PNVPGK;VVNANQNAS(1)PNVPGK 124.3 2.4890999999999997e-07 4056900.0 1116.1200000000001 1288.06 1601.27 883.2 2146.19 1545.22 1314.8899999999999 1341.76 1764.9099999999999 1946.31 2002.6 True False 1304.4937694858863 1353.6167522509154 1828.3541641165366 1099.5840396483545 1830.488294040701 1708.7341547659785 1553.788492788157 1531.9585889676655 1365.1607029821316 1506.6372192289991 1505.2991510517218 0.8666010132102069 0.8992343822855218 1.2146118350223627 0.7304754266818643 1.2160295797428546 1.1351458967954116 1.032212428806963 1.017710391915997 0.9069032570890123 1.0008889051563887 1.0 10.555834509754183 -4.210483959834603 15.069110970359093 0.9839079623572079 1.0073272432563787 0.0 0.14304772789117298 0.0 0.0 0.017519554707121947 0.0 6.159082765565336e-05 4.210483959834603 0.02341928089917078 VVNANQNAS(ph)PNVPGKR ddPTM_A549_MK2206_60min_R1 2 VVNANQNASPNVPGKR 16 1 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 VVNANQNAS(1)PNVPGKR;VVNANQNAS(1)PNVPGKR 168.09 2.9760000000000002e-28 38376000.0 4434.200000000001 4515.9 5178.2 4022.5 6289.0 4838.7 4520.5 4711.8 6629.5 7101.4 6723.6 True False 5182.584554218468 4745.74002103156 5912.546624009849 5008.012680576884 5363.896430987922 5350.728022330889 5341.8163357002195 5379.712079282321 5127.928835136091 5497.188807863499 5053.944558080175 1.025453384907562 0.9390170324373935 1.1698875118360674 0.9909116776063847 1.0613287046080078 1.0587231341460248 1.0569598210490456 1.06445807180083 1.0146389174249313 1.0877026339900528 1.0 12.30319412262473 -8.909208683752118 5.516352631245402 1.0063221159994442 1.0458457943540458 0.0 0.058607190415762254 0.3459672393669609 16.364567251121752 0.008733564487894807 0.009217931137275094 1.2325124537740945e-09 8.909208683752118 0.03952367835460158 VVNANQNAS(ph)PNVPGKR ddPTM_A549_PD325901_60min_R1 2 VVNANQNASPNVPGKR 16 1 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 VVNANQNAS(1)PNVPGKR;VVNANQNAS(1)PNVPGKR 198.96 1.1234999999999999e-39 67482000.0 6768.2 6242.0 6719.7 6874.700000000001 7868.2 8059.0 8012.7 7564.9 7789.2 8054.799999999999 7703.4 True False 7455.3026815144985 6768.0352463009085 7175.739250838704 7299.334605423487 7315.5647758164205 7993.370175952931 8317.627683217683 7414.012134950759 7461.8470116726485 7546.21855335923 6755.930635876004 1.1035197196851934 1.0017917014068536 1.062139272527961 1.0804336217814088 1.0828359807261183 1.1831634465732603 1.2311594259195917 1.0974079715354308 1.1044883989850367 1.1169769140740673 1.0 12.721938800517279 -4.317808898149211 16.26320626400561 1.0756922944500131 1.0829005360533694 0.0 0.06805577065866929 0.0 0.0 0.010228418456505226 0.0 4.810509779158141e-05 4.317808898149211 0.0072082416033563135 VVNGAAASQPPS(ph)KR ddPTM_A549_MK2206_60min_R1 3 VVNGAAASQPPSKR 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VVNGAAASQPPS(1)KR;VVNGAAASQPPS(1)KR;VVNGAAAS(0.001)QPPS(0.999)KR 123.14 5.6881e-07 191060800.0 5565.650000000001 7882.05 7415.98 6451.98 9805.689999999999 7594.92 7443.67 7199.53 10373.62 10189.789999999999 10645.16 True False 6504.995652921837 8283.212678042431 8467.677477255524 8032.71538964039 8363.285990518998 8398.60939330013 8796.088486574861 8220.085425135914 8024.011633267138 7887.909361883495 8001.67298053018 0.8129544494944887 1.0351851041897486 1.0582383831305322 1.003879489849903 1.0451921755448768 1.0496066777204947 1.0992811763212103 1.0272958473980602 1.0027917477746606 0.985782520864887 1.0 12.966085953209635 -5.25889884877772 24.848238639659705 1.0201528415557668 0.812954369219078 0.7830220228178576 0.032525482655505804 82.71390614175782 808949.1295291579 0.004926109164456868 0.04624264409846839 5.509359995794336e-06 5.25889884877772 -0.20719847233668875 VVNGAAASQPPS(ph)KR ddPTM_A549_PD325901_60min_R1 2 VVNGAAASQPPSKR 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VVNGAAASQPPS(1)KR;VVNGAAASQPPS(1)KR 149.73 9.0924e-14 350720000.0 11866.099999999999 11698.8 12725.0 12534.4 13466.5 13912.4 13174.6 15243.7 14560.8 14420.8 15290.4 True False 13070.73773663888 12684.698932942176 13588.595021641218 13308.62142031218 12520.659496902954 13799.10202704151 13675.966612417746 14939.652445048687 13948.86021254597 13510.268226930868 13409.77773383162 0.9747169562447427 0.9459290962697959 1.0133348435267842 0.9924565257137535 0.9336962733777829 1.0290328669824007 1.019850357244517 1.1140865077395978 1.040200702011212 1.0074938224252383 1.0 13.71099770441627 -7.2954702816828405 23.57620881459709 1.028051232060444 0.9740067534288054 0.4452001746376081 0.03454675707660768 277.3563098069079 192148.58233996862 0.005558438318779203 0.008886235035630947 5.064420036347762e-08 7.2954702816828405 -0.05404447863163864 VVNGGPPRMS(ph)PK ddPTM_A549_MK2206_60min_R1 1 VVNGGPPRMSPK 12 1 A0A5F9ZHH4 A0A5F9ZHH4 1 VVNGGPPRMS(1)PK 55.18600000000001 0.005300899999999999 13195000.0 3039.3 3268.9 3484.3 3126.0 4146.3 3231.9 3546.6 2918.6 4754.2 4732.5 5597.6 True False 3552.259536249198 3435.2730473992056 3978.4261330264394 3891.8701403314703 3536.3847625703957 3573.8975128384063 4190.971312066013 3332.320487837635 3677.381290897356 3663.4249631360044 4207.56143409923 0.8442561307508701 0.8164522612929219 0.9455420188958348 0.9249704849917791 0.8404832152682467 0.8493987714295892 0.9960570695655764 0.7919837986990749 0.8739934873190088 0.870676523804645 1.0 12.038768620988138 -10.595654273134011 0.8003021162703082 1.0033212817587176 0.8769754187199463 0.0 0.06804313428384033 0.5484448375909948 0.6046518039650393 0.04236343941985102 0.010582558059629344 2.537147562503839e-11 10.595654273134011 -0.12634586303877127 VVNGGPPRMS(ph)PK ddPTM_A549_PD325901_60min_R1 2 VVNGGPPRMSPK 12 1 A0A5F9ZHH4 A0A5F9ZHH4 1 VVNGGPPRMS(1)PK;VVNGGPPRMS(1)PK 65.374 0.0016518000000000001 21927000.0 7432.299999999999 7721.8 8108.5 8568.6 10281.5 11385.8 8789.5 10483.3 10313.3 9352.2 10871.5 True False 8186.821624629923 8372.54318565946 8658.79157037153 9097.862961297471 9559.362909249456 11293.077819749964 9123.98923229895 10274.202357510241 9879.867866466837 8761.700495943567 9534.37442011657 0.8586637427786089 0.8781428981847238 0.9081656738907119 0.9542170844583044 1.0026208839753725 1.1844592337303963 0.9569573031501943 1.0775958552490563 1.0362366140794 0.9189591377340144 1.0 13.218922566608251 -6.438540139081511 1.872142723407181 1.029497020533275 0.8740817271590507 0.49308935619125926 0.06460809400711374 0.18496193691033874 1.2588060815124211 0.00793931116767113 0.023255842613599902 3.643005785230654e-07 6.438540139081511 -0.15541529337422422 VVNRCVY(ph)S(ph)T(ph)T(ph)KAAVIGLT(ph)K ddPTM_A549_PD325901_60min_R1 1 VVNRCVYSTTKAAVIGLTK 19 2 D6R9P2 D6R9P2 SLC9B2 5 VVNRCVY(1)S(1)T(1)T(1)KAAVIGLT(1)K 41.763000000000005 0.012447 417280000.0 8580.8 9523.4 9124.0 10718.0 11609.0 10402.0 9499.0 9458.5 8427.4 9618.0 10042.0 True False 9451.916499148903 10325.970340375203 9743.209507069114 11380.026517655897 10793.623888875836 10317.289560772113 9860.48964305225 9269.842797450288 8073.225685072928 9010.717838581846 8806.897661482833 1.0732401876868711 1.172486695915188 1.1063157404089368 1.2921719946203873 1.2255875228438267 1.171501016288064 1.1196325905065667 1.0525661991046127 0.9166934822441918 1.0231432435045118 1.0 13.10441818614414 -8.3256654198935 2.0714587079104274 0.9610569207455946 1.1764242454407325 0.6463928469125874 0.06098873511842215 0.12752539615429534 1.0686918811000632 0.010823328585169595 0.013600718378729566 4.724268583609087e-09 8.3256654198935 0.21536732469513797 VVNTDHGS(ph)PEQLQIPVTDSGR ddPTM_A549_MK2206_60min_R1 3 VVNTDHGSPEQLQIPVTDSGR 21 0 Q6IQ49-3;Q6IQ49-2;Q6IQ49 Q6IQ49-3 SDE2 Protein SDE2 homolog 1 VVNT(0.001)DHGS(0.999)PEQLQIPVTDSGR;VVNT(0.002)DHGS(0.998)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR 195.39 7.0726e-56 186804600.0 6695.95 7118.540000000001 7726.5199999999995 7598.570000000001 10005.75 7954.49 6488.75 6929.650000000001 11425.39 11215.199999999999 11284.9 True False 7826.062659740009 7480.843280257318 8822.256718810513 9460.219991112768 8533.917429536878 8796.228852036875 7667.671883259552 7911.949108663086 8837.557407598691 8681.67853070532 8482.5478826044 0.9226075429281478 0.8819099383569258 1.0400479715419906 1.11525689239118 1.006055910045356 1.0369795695554818 0.9039349956378134 0.9327326197460706 1.0418517560887959 1.0234753343991476 1.0 13.050281953400395 -5.759738342353969 24.999918254454375 1.0142219264861914 0.902258711898105 0.375383209332928 0.05405620997935017 33.78148883865644 496435.9797660772 0.00773271018281987 0.02715273790442175 1.7388481500926912e-06 5.759738342353969 -0.11196321458808633 VVNTDHGS(ph)PEQLQIPVTDSGR ddPTM_A549_PD325901_60min_R1 2 VVNTDHGSPEQLQIPVTDSGR 21 0 Q6IQ49-3;Q6IQ49-2;Q6IQ49 Q6IQ49-3 SDE2 Protein SDE2 homolog 1 VVNT(0.001)DHGS(0.999)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR 243.9 7.393199999999998e-87 343700000.0 9578.1 11148.5 11178.5 12329.099999999999 13339.0 10236.5 11826.0 12752.3 12944.1 12567.3 13797.1 True False 10550.461660975458 12088.023220664154 11937.140231781235 13090.640505582314 12402.114657051829 10153.137337900764 12276.044901435507 12497.945372514176 12400.104491320277 11773.798533251158 12100.144167022985 0.8719285915393521 0.9989982808310777 0.9865287608980734 1.0818582262233511 1.0249559415045497 0.8390922618568067 1.014537077573994 1.0328757409829326 1.0247898140845946 0.9730296078073821 1.0 13.562736616124532 VVPEDGS(ph)PEK ddPTM_A549_MK2206_60min_R1 1 VVPEDGSPEK 10 0 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 VVPEDGS(1)PEK 93.01100000000001 0.00060807 10466000.0 2921.3 3694.2 3127.4 3373.6 4570.2 3614.4 3754.3 4057.6 5655.1 5320.8 5317.2 True False 3414.3440210722147 3882.219000796032 3570.912346361363 4200.132151446658 3897.929634107333 3996.8734089554578 4436.407713553665 4632.77722587884 4374.2288793390335 4118.827584543911 3996.79249274554 0.8542710253958616 0.9713336401233071 0.8934445190344058 1.0508757107280886 0.9752644504768136 1.0000202452867053 1.1099920052407168 1.1591237809537664 1.0944348217423263 1.0305332568603132 1.0 11.964626956880485 -6.21431230577585 0.8326481782198238 1.057117888325425 0.8760795933029248 0.5724574095209919 0.0564952951912355 0.6094529560776103 0.6232735592412801 0.010346419359079224 0.07490213616496094 6.105028479321981e-07 6.21431230577585 -0.18103829502250024 VVPEDGS(ph)PEK ddPTM_A549_PD325901_60min_R1 2 VVPEDGSPEK 10 0 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 VVPEDGS(1)PEK;VVPEDGS(1)PEK 123.95 2.5121e-05 24202000.0 16099.7 17226.9 17200.6 17427.1 18949.1 18126.4 17252.5 18440.1 18690.5 20208.8 19936.8 True False 17734.12969202728 18678.67132081081 18367.936151610353 18503.532387184277 17618.18058684615 17978.784608188762 17909.053328430236 18072.297739521407 17905.00328296456 18932.812919144624 17484.699989787983 1.014265598059159 1.0682866352708464 1.0505148022178377 1.058269938745952 1.0076341371105095 1.028258112446273 1.0242699811200706 1.0336063958819204 1.0240383474364476 1.0828217201440355 1.0 14.093805421398155 -10.209496529721108 0.13024264380902026 0.9638377361664551 1.0637500630688759 0.0 0.029756703046909038 9.161080245993718 0.3950012904252445 0.21214999037958848 0.08922721189293188 6.173102245557397e-11 10.209496529721108 0.0999123269024208 VVPEDGS(ph)PEKR ddPTM_A549_MK2206_60min_R1 8 VVPEDGSPEKR 11 1 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR 166.7 2.2956e-14 1115453100.0 36266.8 39552.2 36622.6 35170.5 48756.5 35600.8 35740.399999999994 36562.799999999996 52236.0 50525.00000000001 52559.9 True False 42387.749201869614 41565.2380388947 41816.23536990906 43787.274078863724 41584.483437345014 39368.053026101545 42233.96804876895 41745.68886887887 40404.62940375124 39111.36740886355 39507.826250555976 1.0728949989060232 1.0520760564069194 1.058429160458318 1.1083189897912322 1.052563185167896 0.9964621383224681 1.0690025763737028 1.056643526883269 1.0226993798015562 0.9899650555518265 1.0 15.269850849914247 -8.719333478676575 0.35104624926454586 0.9959108395143548 1.0725075823263512 0.5136275261414424 0.02458576222741348 0.7234934531332209 0.25450724095187366 0.01775839412330564 0.01691239468375452 1.9083873157508658e-09 8.719333478676575 0.07659674281199647 VVPEDGS(ph)PEKR ddPTM_A549_PD325901_60min_R1 5 VVPEDGSPEKR 11 1 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR 161.33 1.5533e-13 1763693600.0 35880.899999999994 35728.4 39141.899999999994 36941.5 40715.299999999996 38615.2 39948.600000000006 41335.799999999996 38711.799999999996 38527.299999999996 42767.700000000004 True False 39523.50255387751 38739.35765683071 41798.30471336567 39223.292554766296 37855.5977881597 38300.73061402877 41468.8658337127 40511.325041692224 37084.8776699108 36094.67970288986 37507.544026787444 1.0537480813366584 1.0328417565587211 1.1143972712133277 1.045744091555381 1.009279566828574 1.0211473880207897 1.105614001388524 1.080084716097634 0.9887311641472771 0.962331196015166 1.0 15.194893178769151 -8.77108530920219 24.913756730280777 0.9946785996171926 1.0572531568034416 0.5012025850627991 0.03244758126620089 127.22448060967854 328597.52564160264 0.005523404001268143 0.00591645338938503 1.6940050114836776e-09 8.77108530920219 0.06257455718624894 VVPGQFDDADS(ph)SDSENRDLK ddPTM_A549_MK2206_60min_R1 2 VVPGQFDDADSSDSENRDLK 20 1 E9PFQ8;Q9BRS2 E9PFQ8 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.598)S(0.4)DS(0.001)ENRDLK;VVPGQFDDADS(0.5)S(0.5)DSENRDLK 169.9 7.2227e-35 95289000.0 7583.200000000001 9381.599999999999 8751.7 7407.4 11402.099999999999 7705.799999999999 7466.6 7289.3 12797.1 14049.099999999999 14275.599999999999 True False 8863.058768560168 9859.083367946523 9992.822658326635 9222.213332530817 9724.86619427054 8521.222641303937 8823.184570764137 8322.580597545015 9898.577282769447 10875.398552476288 10730.574533483445 0.8259631151066588 0.9187842959556788 0.9312476817662703 0.8594333233280314 0.9062763754098427 0.7941068406649154 0.8222471726217891 0.7755950598521468 0.9224647992409118 1.0134963900153657 1.0 13.3894397020947 -9.331913798662692 1.6004049853031637 0.9773943438134417 0.8588802858029182 0.5425120019112506 0.05121666495667036 0.20891073827555623 1.102810824971113 0.011995877158636564 0.010358157555994667 4.656785149762839e-10 9.331913798662692 -0.1185140580105235 VVPGQFDDADS(ph)SDSENRDLK ddPTM_A549_PD325901_60min_R1 2 VVPGQFDDADSSDSENRDLK 20 1 E9PFQ8;Q9BRS2 E9PFQ8 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.499)S(0.499)DS(0.002)ENRDLK;VVPGQFDDADS(0.499)S(0.499)DS(0.001)ENRDLK 138.57 5.0204999999999996e-18 95858000.0 11592.3 12710.8 11933.3 13553.3 16008.400000000001 14043.8 13536.5 15056.7 14309.1 14911.5 16847.5 True False 12769.141762199773 13781.983724556483 12743.165498762355 14390.456559222397 14884.025209981904 13929.431949007041 14051.638914957026 14756.382306747346 13707.738288235638 13969.985345187493 14775.364305101766 0.8642184042657232 0.9327677774955248 0.8624603248775589 0.973949356649943 1.0073541946334696 0.942747106695526 0.9510181018078284 0.9987152940555336 0.9277428295627548 0.9454917697267076 1.0 13.850906081842897 -6.272299854605118 24.51631933242897 0.9682242479692954 0.8911107298791613 0.5958056053617403 0.029974736282362198 314.15214037314183 709163.9619530597 0.004648385622825737 0.010899955044382844 5.341954017694021e-07 6.272299854605118 -0.07711351809013411 VVPGQFDDADSS(ph)DSENR ddPTM_A549_MK2206_60min_R1 2 VVPGQFDDADSSDSENR 17 0 E9PFQ8;Q9BRS2 E9PFQ8 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.188)S(0.812)DSENR;VVPGQFDDADS(0.187)S(0.813)DSENR 231.06 5.3846999999999984e-64 60722000.0 2572.3 2892.3 2574.6000000000004 2629.5 3020.8 2806.6 2762.5 3144.2 4241.0 4545.0 4119.1 True False 3006.4413533030024 3039.505715987864 2939.7169939700584 3273.7276180427416 2576.4443216295626 3103.5925491296985 3264.410491620809 3589.8999787086614 3280.4202714853564 3518.2813433604106 3096.2137886233627 0.9710057375074623 0.9816847038005369 0.9494554299743992 1.0573325492159587 0.8321273973704187 1.0023831560124976 1.054323349251742 1.1594483533079287 1.0594941097216337 1.136317316423007 1.0 11.596289375375068 -7.521560289349255 23.715209983722403 1.041920969454308 0.9598900468737863 0.3718229189335951 0.06840330998953797 26.869672448933454 483306.9221830044 0.00979438859454077 0.014652201124665318 3.009121409559882e-08 7.521560289349255 -0.08203092258052158 VVPGQFDDADSS(ph)DSENR ddPTM_A549_PD325901_60min_R1 2 VVPGQFDDADSSDSENR 17 0 E9PFQ8;Q9BRS2 E9PFQ8 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.051)S(0.949)DSENR;VVPGQFDDADS(0.069)S(0.931)DSENR 274.52 3.7893999999999996e-101 127611000.0 5976.799999999999 5741.5 6150.6 6321.8 6137.3 6467.6 6392.4 7188.8 6713.3 6358.9 7026.0 True False 6583.5603361123885 6225.356354795999 6568.0167025623905 6712.283228150499 5706.237220535586 6414.93000992595 6635.666280055501 7045.413744495501 6431.16334712961 5957.397968783333 6161.846541483609 1.0684395159453681 1.0103069449855366 1.0659169549816452 1.0893298271810514 0.9260596125072721 1.0410726665681298 1.0768957382145075 1.1433932502316346 1.0437071588577986 0.9668202427107102 1.0 12.589147037698647 -10.187490898759709 1.154977526387577 1.0051886329672317 1.0500757164186962 0.1777424458773912 0.05244385153915526 0.7347513330904187 1.9547090427677085 0.018869126842418017 0.009471273008164081 6.493952404071874e-11 10.187490898759709 0.04488708345146453 VVPGQFDDADSS(ph)DSENRDLK ddPTM_A549_PD325901_60min_R1 1 VVPGQFDDADSSDSENRDLK 20 1 E9PFQ8;Q9BRS2 E9PFQ8 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.269)S(0.688)DS(0.043)ENRDLK 126.86 2.711e-16 34135000.0 8909.2 8957.3 8985.1 9659.0 10975.0 10874.0 10730.0 11221.0 11102.0 12081.0 11811.0 True False 9813.655425393601 9712.163106647078 9594.882917795558 10255.614492819392 10204.153861694573 10785.44574926321 11138.33602168129 10997.188352295796 10635.421548244974 11318.203598243637 10358.321876097756 0.9474175009022461 0.9376193579249825 0.9262970423748016 0.9900845538006146 0.9851165066844532 1.0412348523510415 1.0753031383764438 1.061676638729701 1.026751405822466 1.0926676862939397 1.0 13.338502674356471 -6.617592270247426 1.7352171010657467 1.0233358695982635 0.9371215646067399 0.6515711908213668 0.031957423069311715 0.1814298787218339 1.0920859998874302 0.004338907372585584 0.011569296204310279 2.412168988490509e-07 6.617592270247426 -0.0862143049915236 VVPGYGHAVLR ddPTM_A549_MK2206_60min_R1 1 VVPGYGHAVLR 11 0 A0A0C4DGI3;B4DJV2;O75390;H0YIC4 A0A0C4DGI3 CS Citrate synthase;Citrate synthase, mitochondrial 0 102.06 0.00025521 2235000.0 540.95 930.84 954.05 864.46 1317.8 846.37 925.53 649.63 1156.6 1044.8 1128.3 False True 632.2491350422808 978.2157800609004 1089.3486359423348 1076.2527388070841 1123.9533656791039 935.9323116250639 1093.6868207456312 741.7170419084366 894.6319467106723 808.7789543548859 848.1119705041734 0.7454783767129598 1.1534040481463605 1.2844396422028503 1.2689984061506512 1.3252417189807522 1.1035480504640023 1.2895547507665432 0.8745508467089685 1.0548512199148001 0.953622849909894 1.0 9.728110936434845 -8.254991004549009 24.93453750157336 1.0152743624855487 1.1787548745232739 0.24706749594940547 0.15738750782865257 612.4795223948547 2368334.027868356 0.024497610227734216 0.03122235773797045 5.559157717185468e-09 8.254991004549009 0.16348051203772518 VVPGYGHAVLR ddPTM_A549_PD325901_60min_R1 2 VVPGYGHAVLR 11 0 A0A0C4DGI3;B4DJV2;O75390;H0YIC4 A0A0C4DGI3 CS Citrate synthase;Citrate synthase, mitochondrial 0 ; 121.73 1.0474000000000002e-05 5891000.0 1542.9499999999998 1908.7400000000002 1876.6999999999998 1581.8899999999999 2077.3999999999996 1850.2 1522.46 1899.22 1843.61 2164.6000000000004 1891.16 False True 1699.5891481402437 2069.596218523613 2004.064147513875 1679.5997525671464 1931.4905906409374 1835.132584631854 1580.3980484220785 1861.338567190733 1766.1294830264744 2027.9267865870536 1658.5593090509742 1.0247382405111256 1.2478276822719314 1.208316239628837 1.0126859759559708 1.1645592533836695 1.1064618398734951 0.9528740032374124 1.1222622893454375 1.064857598633028 1.2227038101805543 1.0 10.695714887589245 -7.4816294204305365 0.2266651582279176 0.9919425350497099 1.1969904128862305 0.0 0.10138155893036094 3.5209128872141924 0.41314350388912285 0.0920231093593373 0.22903684496268295 3.298910852053339e-08 7.4816294204305365 0.20504787783652068 VVPQQITHTS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VVPQQITHTSPR 12 0 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 VVPQQIT(0.04)HT(0.256)S(0.704)PR;VVPQQITHT(0.374)S(0.625)PR 130.95 2.1158e-08 63265000.0 2944.2 3009.3 3429.1000000000004 3416.3999999999996 3578.4 3591.6000000000004 3010.7 3775.8 3489.6000000000004 3433.3999999999996 4392.7 True False 3243.093016594516 3262.9042721392707 3661.8193468534296 3627.4232687926456 3327.065528809825 3562.3512003911874 3125.273836018255 3700.4887069422034 3342.9442474108864 3216.6145380522894 3852.4257476195603 0.8418314145570346 0.8469739550867246 0.9505230176379369 0.9415945968677151 0.8636287229846392 0.9247034034575198 0.8112482993213777 0.9605606828966814 0.8677504685136408 0.8349582182187046 1.0 11.911551434893806 -10.852627920702748 0.8476240410150737 1.0078387990910607 0.8899695814227231 0.0 0.06756108838204808 0.5450613635461772 0.6152433729991158 0.043872147920861186 0.008204028121357832 1.4040160721149079e-11 10.852627920702748 -0.11786921766833758 VVPS(ph)PLQFCAATPK ddPTM_A549_MK2206_60min_R1 2 VVPSPLQFCAATPK 14 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VVPS(1)PLQFCAATPK;VVPS(1)PLQFCAATPK 101.36 2.9658000000000003e-05 4650100.0 3720.3 3048.6 3811.8 3613.3999999999996 4650.9 3796.1 3483.5 2875.8 5202.5 4649.5 4948.9 True False 4348.195687397717 3203.7607183765826 4352.3705576070315 4498.68316221169 3966.7587710099756 4197.800782352758 4116.406858845639 3283.453456768132 4024.1420566853476 3599.17472078201 3719.951547308431 1.1688850330708882 0.8612372171069438 1.1700073246266303 1.2093391822446475 1.0663468920395271 1.1284557685677583 1.1065753966134486 0.8826602752780135 1.0817727073883565 0.967532688264768 1.0 11.861068114889726 VVPS(ph)PLQFCAATPK ddPTM_A549_PD325901_60min_R1 2 VVPSPLQFCAATPK 14 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VVPS(1)PLQFCAATPK;VVPS(0.999)PLQFCAAT(0.001)PK 97.79700000000001 3.1986999999999997e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VVPSFLPVDQGGS(ph)LVGR ddPTM_A549_MK2206_60min_R1 2 VVPSFLPVDQGGSLVGR 17 0 Q14126 Q14126 DSG2 Desmoglein-2 1 VVPSFLPVDQGGS(1)LVGR;VVPSFLPVDQGGS(1)LVGR 190.82 1.0805999999999998e-39 119625000.0 6670.5 6939.2 6998.2 6171.7 10353.9 7724.799999999999 7128.4 8142.299999999999 12498.1 10493.1 11277.1 True False 7796.317321932772 7292.375640280391 7990.649991144746 7683.766777058141 8830.855025728391 8542.233208692758 8423.53800849584 9296.495959747954 9667.300305364566 8122.701422225546 8476.68483787345 0.9197366035244313 0.860286276976865 0.9426621543652157 0.9064589428555151 1.0417816864291716 1.0077327837560317 0.9937302341193396 1.0967136489741396 1.1404576777670792 0.9582403472090502 1.0 13.04928443352031 -6.871948256401988 0.9260192415255298 1.0664336213438883 0.8888616510533439 0.5017376928105931 0.05593884167011812 0.3161981612755275 0.5156258543064306 0.009958207745022214 0.03180084870313558 1.3429249531075219e-07 6.871948256401988 -0.1775719702905444 VVPSFLPVDQGGS(ph)LVGR ddPTM_A549_PD325901_60min_R1 2 VVPSFLPVDQGGSLVGR 17 0 Q14126 Q14126 DSG2 Desmoglein-2 1 VVPSFLPVDQGGS(1)LVGR;VVPSFLPVDQGGS(1)LVGR 198.51 3.8443999999999997e-48 77566000.0 13997.4 15901.2 15129.3 15126.4 16993.6 15287.4 15954.7 16479.5 16699.5 16402.3 17177.5 True False 15418.405743658745 17241.249929266258 16156.06527787163 16060.723373453067 15800.028160737398 15162.904482921322 16561.864839246828 16150.803444582345 15997.678089075565 15366.655978765977 15064.776397144136 1.0234739193727194 1.1444743336870715 1.0724397662440162 1.0661109697252285 1.0488060190347495 1.0065137432637756 1.0993767449735594 1.072090485700411 1.061926023150817 1.0200387694887438 1.0 13.878891639064943 -14.999999998129526 0.19915848250044924 0.6767150951986214 1.07891246833609 0.256501295569039 0.035230734147714805 38.25644888750347 0.4491830565025917 4.796461121426228 0.029456845259905072 1.0000000043069244e-15 14.999999998129526 0.4021973731374686 VVQGS(ph)PEVPGITVR ddPTM_A549_MK2206_60min_R1 1 VVQGSPEVPGITVR 14 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 VVQGS(0.977)PEVPGIT(0.023)VR 49.482 0.027647 2273500.0 2609.3 3207.1 2629.4 2462.0 3847.4 2934.2 2826.1 2670.4 4173.2 4013.3 4513.2 True False 3049.6860487398526 3370.327691368349 3002.2884579914844 3065.19011052338 3281.4525566199613 3244.695096435676 3339.565788369072 3048.9373777570154 3227.9768632310024 3106.6927426420984 3392.4478820166937 0.8989632721864894 0.9934795783405831 0.8849917706640572 0.903533441669627 0.9672816416767619 0.9564465569642934 0.9844118184017067 0.8987425846449635 0.9515184832587851 0.9157672720959463 1.0 11.728110936434845 -14.999999999999881 0.15483828643747588 1.2383642757278739 0.9203079382580165 0.0 0.04338917214734784 51.12546725083217 0.5160977084056473 3.673546047513328 0.059294859916230284 1.000000000000274e-15 14.999999999999881 -0.3180563374698574 VVQGS(ph)PEVPGITVR ddPTM_A549_PD325901_60min_R1 1 VVQGSPEVPGITVR 14 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 VVQGS(0.997)PEVPGIT(0.003)VR 87.932 7.833e-05 2703400.0 2139.9 1928.6 2182.1 1743.6 2232.5 1920.0 1967.6 2466.0 2241.4 2431.0 2585.3 True False 2357.141072688881 2091.129890422289 2330.1904280332633 1851.2982119970914 2075.69690170689 1904.3641565739701 2042.4780947120344 2416.8136954604247 2147.201752678461 2277.5062451229433 2267.3244895669764 1.0396134666807477 0.9222896414009369 1.0277269260556054 0.8165122462690201 0.9154829453208595 0.8399169000012319 0.9008318412783147 1.0659319857308993 0.9470200505303691 1.0044906477228195 1.0 11.146775162722903 VVS(ph)DADDS(ph)DSDAVSDK ddPTM_A549_PD325901_60min_R1 2 VVSDADDSDSDAVSDK 16 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 VVS(1)DADDS(0.984)DS(0.016)DAVSDK;VVS(1)DADDS(0.982)DS(0.018)DAVSDK 133.71 3.5839999999999997e-10 5558500.0 2039.8 2345.3 1936.75 1927.9 2237.7 2047.1799999999998 1960.4699999999998 1733.62 1964.01 2444.4 2396.5 True False 2246.8789943786064 2542.9466618310666 2068.18950162386 2046.9820044214205 2080.531671645918 2030.5084448203654 2035.0767586603465 1699.0415891014193 1881.469489728752 2290.060166836085 2101.7456926651657 1.0690536929467434 1.2099211958447866 0.984034133549833 0.9739437133451189 0.9899064757961527 0.9661056767745929 0.9682792574584616 0.8083954186421629 0.8951936936494502 1.0895990770092279 1.0 11.037372401095237 -5.885296461069916 5.520313891042653 0.9469081562489637 1.1378204570689305 0.4547750336010752 0.07301648339794706 0.10499755257314417 4.6299651600241125 0.008949060387826422 0.02891740568645285 1.30227750538738e-06 5.885296461069916 0.1909123008199668 VVS(ph)EEHLR ddPTM_A549_MK2206_60min_R1 1 VVSEEHLR 8 0 R4GN46;B7Z4S5;Q5VXU3-2;Q5VXU3 R4GN46 CHIC1 Cysteine-rich hydrophobic domain-containing protein 1 1 VVS(1)EEHLR 68.657 0.0022855999999999996 2187700.0 296.75 398.54 203.43 339.07 307.26 280.16 188.67 266.51 380.21 319.5 337.48 True False 346.83414515906577 418.8239836980268 232.27943295398464 422.1421652214308 262.0624610248609 309.80634524484293 222.9488968159629 304.28860865264465 294.0930420706077 247.32472809761316 253.67440202583404 1.3672414023222745 1.6510297466094903 0.9156597240360478 1.6641102210164669 1.0330662413394498 1.2212755515366995 0.8788781802006886 1.1995242965888853 1.1593327498635728 0.9749691972169339 1.0 7.986834135926252 -2.000000000011103 0.22157445666997233 1.0294557130841284 3.5395241460594886 0.29209236725542287 0.21965552926139503 40.51392847704095 0.4717450912141144 0.12145371169164464 36.97216650459933 0.009999999999744342 2.000000000011103 2.51006843297536 VVS(ph)EEHLR ddPTM_A549_PD325901_60min_R1 1 VVSEEHLR 8 0 R4GN46;B7Z4S5;Q5VXU3-2;Q5VXU3 R4GN46 CHIC1 Cysteine-rich hydrophobic domain-containing protein 1 1 VVS(1)EEHLR 81.33800000000001 0.0017062999999999998 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VVS(ph)ETNDTK ddPTM_A549_MK2206_60min_R1 2 VVSETNDTK 9 0 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 VVS(0.781)ET(0.219)NDT(0.001)K;VVS(0.968)ET(0.024)NDT(0.008)K 119.45 0.00015245 140714000.0 9654.5 10901.8 8564.2 8849.8 12776.3 10187.2 9786.1 9036.1 14697.599999999999 14634.7 14393.4 True False 11283.943570137162 11456.655054647335 9778.732338910262 11018.001397282613 10896.923194662273 11265.202742283924 11564.107696669817 10316.99484689565 11368.617067244315 11328.711105759423 10819.121542368848 1.0429630100695348 1.0589265505320222 0.9038379225721507 1.0183822553554769 1.007191124712736 1.0412308151052905 1.06885828497106 0.9535889588164053 1.0507892921549669 1.0471008261987784 1.0 13.401295743971318 -7.051388229423467 13.201744730984268 1.0235234137723288 1.0037893649602638 0.043116649371913396 0.04660299619949878 6.585770717796187 1690.092893274856 0.006768435919500813 0.011731674019930432 8.884065883419996e-08 7.051388229423467 -0.019734048812064975 VVS(ph)ETNDTK ddPTM_A549_PD325901_60min_R1 1 VVSETNDTK 9 0 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 VVS(0.859)ET(0.138)NDT(0.002)K 166.87 8.979e-07 101550000.0 16462.0 17832.0 17556.0 18153.0 21066.0 17130.0 19133.0 20155.0 19341.0 19770.0 21590.0 True False 18133.210121316104 19334.765221409452 18747.455732804177 19274.269581545763 19586.396833754698 16990.4989594334 19861.116784979342 19752.992713708365 18528.16503013926 18521.7188260307 18934.56687028624 0.9576775769702083 1.0211358598200226 0.9901180133264261 1.017940875732025 1.0344253960459675 0.8973270461283359 1.0489343073459538 1.043223900975864 0.9785365124572909 0.9781960661110546 1.0 14.208734799386143 VVS(ph)PTKEQVSDTEDKQR ddPTM_A549_PD325901_60min_R1 1 VVSPTKEQVSDTEDKQR 17 2 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 VVS(0.5)PT(0.5)KEQVSDTEDKQR 111.38 1.4997e-09 18917000.0 4444.7 4504.7 4585.2 4414.2 5240.5 5163.4 5185.3 5204.7 6527.1 5615.1 6088.0 True False 4895.922671984796 4884.326878246023 4896.3792450474875 4686.855108624428 4872.425358743545 5121.350982319816 5382.629429005036 5100.888175491835 6252.7886856016685 5260.561627721041 5339.2145950117 0.916974319885726 0.9148025035010453 0.9170598330365026 0.8778173315984048 0.912573426678848 0.9591955691581625 1.0081313146757387 0.955363019170923 1.1711064566394276 0.9852688132512706 1.0 12.38241181997982 -8.028728969853308 1.315977249908732 1.0769557886080168 0.9093187846072317 0.44746823280077963 0.05651022589401201 0.236235991989136 0.8148385651588168 0.012131905800822096 0.017408866286943908 9.359896149347275e-09 8.028728969853308 -0.16763700400078507 VVSAPVGKET(ph)PSK ddPTM_A549_MK2206_60min_R1 2 VVSAPVGKETPSK 13 1 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VVSAPVGKET(0.795)PS(0.205)K;VVSAPVGKET(0.994)PS(0.006)K 119.46 4.7887e-06 57471000.0 8985.9 11295.9 12394.8 10758.599999999999 15951.599999999999 11858.8 13504.8 11358.8 16201.5 15252.0 14522.400000000001 True False 10502.500235837746 11870.813061310135 14152.569019210776 13394.457482971904 13605.140770956748 13113.690344765657 15958.447351037348 12968.944684866077 12531.886118479137 11806.562607025957 10916.087282149965 0.9621121528600711 1.08746043838632 1.2964873450904997 1.2270383276317862 1.246338584449021 1.201317835394118 1.4619200944950919 1.1880579872307317 1.1480199630660093 1.0815745882072691 1.0 13.414168214728656 -9.758147299106211 0.9241051683173603 1.021953676586899 1.2131454985193773 0.21260076454378096 0.11927733541860194 0.46052216016769437 0.8162156632111968 0.041325103585509906 0.02465273165882027 1.7452301250491184e-10 9.758147299106211 0.1911918219324782 VVSAPVGKET(ph)PSK ddPTM_A549_PD325901_60min_R1 2 VVSAPVGKETPSK 13 1 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VVSAPVGKET(0.888)PS(0.112)K;VVS(0.026)APVGKET(0.929)PS(0.045)K 99.344 6.2368e-05 100133000.0 12016.7 12769.099999999999 13409.1 12447.599999999999 14800.9 14895.3 13878.9 14840.9 15270.7 12307.400000000001 13632.7 True False 13236.626537773007 13845.19687016035 14319.12216146869 13216.459981449281 13761.335844333038 14773.997615320968 14407.06913432549 14544.88660703918 14628.925584289713 11530.308663605978 11955.96432480552 1.1071149242483473 1.1580159068754632 1.197655142861227 1.1054281881745465 1.1510017486236424 1.2357010454329276 1.2050110507970122 1.2165381404544942 1.2235671826101466 0.9643980485692469 1.0 13.54544287685182 -10.807242334750532 1.0333071680510397 0.9991237971552308 1.180788926358334 0.7352339742944289 0.044603497836384606 0.24425130939474227 0.4593712301254339 0.032436770707170985 0.007924283026971407 1.558682520915533e-11 10.807242334750532 0.18166512920310318 VVSAPVGKET(ph)PSKR ddPTM_A549_MK2206_60min_R1 4 VVSAPVGKETPSKR 14 2 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VVSAPVGKET(0.956)PS(0.044)KR;VVSAPVGKET(0.983)PS(0.017)KR;VVSAPVGKET(0.959)PS(0.041)KR;VVSAPVGKET(0.989)PS(0.011)KR 125.41 2.0454e-07 334791000.0 16852.5 18493.8 17625.1 16875.2 23395.699999999997 18171.9 17712.0 17927.9 24726.300000000003 25609.2 26045.7 True False 19696.78999593314 19435.055426593477 20124.604206642456 21009.624757556503 19954.223522096378 20094.83839646904 20930.041132158454 20469.234726891103 19125.832529787407 19824.06393363816 19577.83386524909 1.0060760619128146 0.9927071381012663 1.027928030504125 1.0731332639842686 1.019225296293651 1.0264076472800008 1.0690682777377916 1.0455311281001451 0.9769125972478503 1.0125769822179427 1.0 14.256933530357294 -8.761747878238031 24.999999989462353 0.9890976141750797 1.0329566741863119 0.29087387507772566 0.024297892029684964 6.2039991126850085 502734.87650230754 0.004300054912100461 0.0047185034826852665 1.730820864183677e-09 8.761747878238031 0.04385906001123219 VVSAPVGKET(ph)PSKR ddPTM_A549_PD325901_60min_R1 3 VVSAPVGKETPSKR 14 2 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VVS(0.001)APVGKET(0.837)PS(0.162)KR;VVSAPVGKET(0.811)PS(0.189)KR;VVSAPVGKET(0.833)PS(0.167)KR 114.52 1.4786000000000001e-06 411124000.0 18345.9 18083.9 18586.3 17996.800000000003 22316.1 20518.4 18658.2 21333.3 21025.9 21209.2 21150.9 True False 20208.362262462237 19607.893718452575 19847.67808650138 19108.421462301692 20748.694122365563 20351.30495325384 19368.248011158797 20907.7905958499 20142.254542536826 19870.047492415284 18549.47338660199 1.089430510574949 1.0570593196793967 1.0699860676819573 1.0301328271725183 1.1185597396717493 1.0971365347737196 1.0441400468623652 1.127136612457758 1.0858666509144825 1.0711919998099313 1.0 14.179090609343124 -10.632594524005059 0.9124018797422486 1.0000558624766085 1.0792677992503419 0.07994332031968354 0.03455600160845585 0.3603974171526172 0.5358238204127874 0.018576310589367557 0.005040333840888045 2.3302658787299417e-11 10.632594524005059 0.0792119367737334 VVSAPVGKETPS(ph)KR ddPTM_A549_PD325901_60min_R1 1 VVSAPVGKETPSKR 14 2 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VVSAPVGKET(0.4)PS(0.6)KR 79.837 0.00018265 15821000.0 2564.1 2950.0 2514.8 2754.0 2843.6 2715.8 2745.7 2980.5 2906.8 3388.4 3184.2 True False 2824.4055444093465 3198.6068530259004 2685.4694507208887 2924.1083252121957 2643.8753458874407 2693.6834252206213 2850.1891160046903 2921.0515893429815 2784.6373046692916 3174.455845732038 2792.5635863068737 1.0114024111245334 1.145401619039233 0.9616502427693632 1.0471053692565289 0.9467556473383401 0.964591616974774 1.020635350965822 1.0460107707721102 0.9971616468550804 1.1367532905240707 1.0 11.447374415721683 -5.775102407015698 24.999999072380596 0.9989042569907294 1.0784020467727062 0.11591575886387129 0.058994463752956194 145.64548821823172 266497.0871680048 0.005131911815462532 0.016076266643805404 1.6784082013470846e-06 5.775102407015698 0.07949778978197686 VVSET(ph)NDTK ddPTM_A549_PD325901_60min_R1 1 VVSETNDTK 9 0 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 VVS(0.295)ET(0.53)NDT(0.175)K 146.71 3.135e-05 92903000.0 22050.0 21352.0 21463.0 22385.0 23458.0 20702.0 20780.0 22033.0 21569.0 21386.0 26314.0 True False 24288.49976764793 23151.40797485053 22919.608247503766 23767.67060997642 21810.391005706715 20533.40977572623 21570.794271252304 21593.534530445886 20662.529938217947 20035.684310242414 23077.54481818952 1.0524733007344849 1.0032006505563273 0.9931562663216553 1.0299046452828444 0.9450914808110764 0.8897571183370415 0.9347092353711037 0.9356946200544718 0.8953521746356624 0.8681895959075535 1.0 14.49420212575842 -6.769472825409569 23.94756773770445 0.9421587877130874 1.0166115384283911 0.5659687211499851 0.03820102172833102 80.60237316587596 240275.81239822262 0.006215246075106596 0.011902447706995273 1.700306341553846e-07 6.769472825409569 0.07445275071530377 VVSETNDTK ddPTM_A549_MK2206_60min_R1 2 VVSETNDTK 9 0 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 260.23 2.0570999999999995e-55 107760000.0 24638.0 27475.0 24834.0 21729.0 32805.0 24106.0 25647.0 22958.0 36204.0 35069.0 35104.0 False True 28796.29205873318 28873.36014478666 28355.834626059364 27052.605975451872 27979.427956520733 26656.880919732244 30306.7279198548 26212.366805926278 28003.851805908005 27146.888543521716 26386.70797888728 1.0913181015901594 1.094238817812704 1.0746257035454228 1.0252361149824902 1.0603606929256895 1.0102389786956802 1.1485604018547533 0.9933928410811801 1.0612863047680918 1.028809223387877 1.0 14.687523749963939 VVSETNDTK ddPTM_A549_PD325901_60min_R1 2 VVSETNDTK 9 0 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 215.14 6.658700000000001e-23 169297000.0 19857.4 19164.1 20972.5 20017.5 22104.5 21270.3 20463.9 22613.6 22642.1 21761.6 23851.4 False True 21873.308629754734 20779.1259634148 22395.819967887634 21253.935511959022 20551.956176385196 21097.081728945494 21242.664912775766 22162.554007973988 21690.53127702372 20387.568862142118 20917.829006481945 1.045677762399564 0.9933691472941976 1.0706569960461811 1.0160679440190914 0.9825090438408607 1.0085693750727192 1.0155291405333298 1.0595054582914092 1.036939888470373 0.9746503260842455 1.0 14.352445506272403 VVSQS(ph)QPGS(ph)R ddPTM_A549_MK2206_60min_R1 2 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 2 VVS(0.094)QS(0.906)QPGS(1)R;VVS(0.149)QS(0.851)QPGS(1)R 57.802 0.014356 29903000.0 1999.69 2229.4 1804.13 1648.85 2585.3999999999996 2118.91 1787.1799999999998 1973.39 2687.9 2934.2 2723.6000000000004 True False 2337.188784273405 2342.8669374626916 2059.9827624994955 2052.8183240196886 2205.0910848586695 2343.131649781375 2111.8874723673753 2253.1240757534133 2079.0949416942913 2271.362182109598 2047.2549524640328 1.1416207744230458 1.144394319155446 1.0062170126979757 1.0027174786164077 1.0770964711574729 1.144523620256105 1.031570332666946 1.1005586153505702 1.0155525276380142 1.1094671815915427 1.0 10.999475062524946 -2.000000000045098 0.0847861157605221 0.9354754014093009 1.419774942544314 0.0 0.060375059713010805 127.9376130685242 0.762781843726965 0.6020692977493207 7.239882091817244 0.009999999998961577 2.000000000045098 0.48429954113501317 VVSQS(ph)QPGS(ph)R ddPTM_A549_PD325901_60min_R1 4 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 2 VVS(0.008)QS(0.992)QPGS(1)R;VVS(0.035)QS(0.965)QPGS(1)R;VVS(0.028)QS(0.972)QPGS(1)R;VVS(0.137)QS(0.863)QPGS(1)R 88.275 0.0008145 97455000.0 9871.16 10287.9 10097.5 10001.2 11958.400000000001 9714.2 9541.25 11048.0 11285.4 10808.3 11672.0 True False 10873.272896436078 11154.897438388192 10782.777071200171 10618.95140962681 11118.483238240402 9635.090775932747 9904.347489922337 10827.638973011659 10811.113884035649 10125.862093443979 10236.417994904166 1.062214624475959 1.0897266449984027 1.053374049063646 1.037369850949138 1.0861693263967278 0.9412560898479558 0.9675598920298938 1.0577566272109844 1.056142284285145 0.9891997472636206 1.0 13.321423344394166 VVSQS(ph)QPGSR ddPTM_A549_MK2206_60min_R1 2 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 1 VVS(0.004)QS(0.995)QPGS(0.001)R;VVS(0.004)QS(0.995)QPGS(0.001)R 97.779 0.00050828 28415000.0 6080.5 6296.0 5759.1 4744.6 8016.1 5632.9 4973.700000000001 5472.1 8031.7 8242.8 8821.0 True False 7106.7397460478505 6616.439507609717 6575.826978937681 5907.027212993188 6836.94230886346 6228.969739183596 5877.356909384403 6247.786932603412 6212.532773989373 6380.745755126773 6630.502252785001 1.0718252517089208 0.9978790829654908 0.9917539770347933 0.890886842020462 1.0311349047489953 0.9394416141804719 0.8864120220931596 0.9422795882437357 0.9369626217048537 0.9623321902117863 1.0 12.694902441599918 -5.284179056547185 1.5587261750972223 0.959576224702345 1.1098045086794226 0.4196820348725173 0.04129359592938883 0.8669753774410123 1.9981865800845464 0.006247709595037412 0.19545972375148127 5.197816500470222e-06 5.284179056547185 0.15022828397707755 VVSQS(ph)QPGSR ddPTM_A549_PD325901_60min_R1 2 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 1 VVSQS(1)QPGSR;VVS(0.061)QS(0.929)QPGS(0.011)R 119.39 5.8994e-05 42950000.0 9749.7 9782.900000000001 10347.0 9754.8 11368.900000000001 9640.1 9158.6 10469.8 9778.3 10462.7 11767.8 True False 10739.482366650212 10607.339316090534 11049.20964156555 10357.331841241805 10570.3876845758 9561.594221764966 9507.135534778217 10260.971625600787 9367.352055954227 9802.08333642445 10320.435202230405 1.0406036331034998 1.0277996138959455 1.0706147003546562 1.0035751049532704 1.0242191804364391 0.9264719979733567 0.921195215946279 0.9942382684969752 0.9076508763825966 0.9497742240856344 1.0 13.333216188572361 -7.1599744247351005 5.2702862576061715 0.9537944780576514 1.0347374790037334 0.6520320803082662 0.030329405632260782 0.14777363563185314 6.235507358150043 0.005696093884201602 0.00997367655197946 6.918717135073883e-08 7.1599744247351005 0.08094300094608198 VVSQSQPGS(ph)R ddPTM_A549_MK2206_60min_R1 2 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 1 VVSQSQPGS(1)R;VVSQSQPGS(1)R 132.5 9.865799999999999e-07 121999000.0 2990.6 4553.700000000001 3663.8 2962.4 4760.5 3613.8 3697.1000000000004 3695.2 4819.5 4739.6 5261.5 True False 3495.3401668498846 4785.46387957471 4183.381932147715 3688.188132987191 4060.236756196217 3996.209917353706 4368.815213962457 4219.005916075386 3727.8909451600284 3668.921068204841 3954.9243399873358 0.8837944462070486 1.2100013725142549 1.0577653508691676 0.9325559267207122 1.0266281746894856 1.010439030893446 1.1046520333626526 1.0667728516113397 0.9425947564832469 0.9276842621511666 1.0 11.94943438002535 -8.75929025327147 24.99961422391291 0.97289196785266 1.0406623160061093 0.1478435424048995 0.08248752483975882 85.19350972195069 991006.132822403 0.013375189325382153 0.014811792267420713 1.7406431555479344e-09 8.75929025327147 0.06777034815344929 VVSQSQPGS(ph)R ddPTM_A549_PD325901_60min_R1 2 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 1 VVSQSQPGS(1)R;VVSQSQPGS(1)R 138.24 3.2233000000000005e-07 228805000.0 7663.6 6733.4 5546.0 6163.0 8199.1 7207.9 6445.8 5796.2 5911.9 7036.4 9219.8 True False 8441.603030355864 7300.847248869352 5922.384910807241 6543.674512811465 7623.223501359448 7149.201252171632 6691.098446277104 5680.590243969065 5663.443402186043 6592.120503160462 8085.823049127601 1.044000465885368 0.9029194931067727 0.7324405783832014 0.8092774814701736 0.9427888113606365 0.8841649401346938 0.8275098781686823 0.7025370465634859 0.7004164409456235 0.815268954453771 1.0 12.981178916550272 -5.352735173719178 3.6443579409357003 0.8406787945016507 1.0499728499563632 0.3234321224502239 0.09078896515690514 0.3036717807176639 6.546460694515758 0.01669638622852661 0.14235454764501776 4.438792323409782e-06 5.352735173719178 0.20929405545471247 VVSS(ph)PK ddPTM_A549_MK2206_60min_R1 1 VVSSPK 6 0 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 VVS(0.059)S(0.941)PK 76.774 0.045009 16058000.0 5486.4 5805.7 4353.3 4331.2 9929.3 8058.2 7556.8 7801.3 11087.0 6225.0 7338.2 True False 6412.370190398313 6101.185331850339 4970.66340008151 5392.344194434959 8468.713123264175 8910.913375399752 8929.77274319642 8907.158165479248 8575.812202300911 4818.7681765497355 5515.922415983093 1.162520011488495 1.1061042690106322 0.9011481716418591 0.9775960914188985 1.5353212907282727 1.6154892515491583 1.6189083293342301 1.61480845699889 1.5547376405170956 0.8736105791819582 1.0 12.429386449479242 -6.748845790194075 24.991515631956165 1.365155109200975 1.0320969354019607 0.3291270832040143 0.24713675723788675 262.37118867097973 520662.70310030115 0.04015759820085261 0.08314780367314016 1.7830117690170816e-07 6.748845790194075 -0.33305817379901437 VVSS(ph)PK ddPTM_A549_PD325901_60min_R1 2 VVSSPK 6 0 O75152;A0A1B0GTU1;A0A494C0C4 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 VVS(0.175)S(0.825)PK;VVS(0.229)S(0.771)PK 93.195 0.03639 33976000.0 12305.900000000001 12766.400000000001 11569.8 11319.7 14640.7 12166.1 10058.2 12146.400000000001 13338.5 13180.7 15122.1 True False 13555.18590887522 13842.269331684704 12354.996202859294 12018.89216009604 13612.38773967304 12067.023315257602 10440.97030505823 11904.130523333532 12777.929230883215 12348.468352567668 13262.17756689002 1.0220935318131101 1.0437403105085037 0.9315963491323197 0.9062532981086053 1.0264066870630162 0.9098825026580697 0.7872742053405214 0.8975999954225503 0.963486513917913 0.9311041335622369 1.0 13.69503005598235 -4.297876605028872 14.408569849412865 0.962059577042608 0.9541192806513091 0.0 0.07279228216784582 0.0 0.0 0.009990696456005692 0.0 5.036436874427089e-05 4.297876605028872 -0.007940296391298896 VVSS(ph)TSEEEEAFTEK ddPTM_A549_MK2206_60min_R1 1 VVSSTSEEEEAFTEK 15 0 Q8N573-3;Q8N573-2;Q8N573-5;Q8N573-8;Q8N573 Q8N573-3 OXR1 Oxidation resistance protein 1 1 VVS(0.269)S(0.686)T(0.043)S(0.002)EEEEAFTEK 234.22 2.043e-55 6500900.0 2550.2 2696.2 2387.3 2509.4 3059.2 2661.4 1915.8 2062.2 3031.4 3032.4 2585.1 True False 2980.611413596124 2833.4250635986823 2725.855037561067 3124.2031126512466 2609.1957324977348 2943.0275815056593 2263.876061483129 2354.5231652226307 2344.7927401510738 2347.378733906734 1943.1483248695733 1.5339083359970405 1.4581620081878544 1.4028033797903874 1.607804753073056 1.3427671470590734 1.5145666153422432 1.1650557152579093 1.2117053212500746 1.2066977647259425 1.2080285914685864 1.0 10.924180313936601 -8.331886364169296 0.3434856988482779 0.9981661188469865 1.5543315985976596 0.6660932508443286 0.10378545386853716 0.3747967226189996 0.12128902938393014 0.05371331575591356 0.07169048633658802 4.657079329362281e-09 8.331886364169296 0.5561654797506731 VVSSEGGRPS(ph)VDLSFQPSQPLSK ddPTM_A549_PD325901_60min_R1 1 VVSSEGGRPSVDLSFQPSQPLSK 23 1 P49815;P49815-6;A0A2R8YDZ2;A0A2R8YGU4;A0A2R8Y7X5;A0A2R8Y5F1;A0A2R8YDR3;H3BMQ0;A0A2R8Y7C8;P49815-5;P49815-3;P49815-2;A0A2R8YGD6;P49815-4;X5D2U8;P49815-7;A0A2R8Y6C9;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 VVS(0.119)S(0.119)EGGRPS(0.752)VDLS(0.009)FQPS(0.002)QPLSK 52.824 0.0020798 1479800.0 1226.1 1561.9 2006.3 1517.5 1587.0 1890.0 1630.8 2087.5 1654.3 2055.0 2054.5 True False 1350.5727693928866 1693.5267944885277 2142.459582861985 1611.2325285074476 1475.5345948527822 1874.6084666275035 1692.8609864080015 2045.8631748879304 1584.7755239832145 1925.2469492915056 1801.8095245485433 0.749564674285581 0.9399033423984443 1.189059972029393 0.8942302205396288 0.8189181901580237 1.0404032396805099 0.9395338204975692 1.1354491953862529 0.8795466459643073 1.068507477100772 1.0 10.81523079164393 VVSSIEQK ddPTM_A549_MK2206_60min_R1 2 VVSSIEQK 8 0 P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ; 138.54 0.0030210000000000002 18718400.0 8743.0 9760.1 10576.9 9109.0 13202.9 10328.0 9934.5 10229.1 14058.8 15004.5 14143.599999999999 False True 10218.60465417258 10256.847401242307 12076.863463653344 11340.705408918555 11260.770899775871 11420.902104828454 11739.470055749101 11679.106250304932 10874.50424729034 11614.973028922168 10631.35377649812 0.961176240486139 0.9647734067430148 1.1359666621527258 1.0667226062957798 1.0592038546087286 1.0742660196367209 1.104230966492772 1.098553062557564 1.0228710732333763 1.0925206020891203 1.0 13.37603769817612 -8.947253325473342 7.689167693141868 1.0099908580358699 1.0601346036681463 0.0 0.05658150423470448 0.32118204660358884 39.38105253142449 0.009252805273542173 0.009763800263746021 1.1291370929734318e-09 8.947253325473342 0.050143745632276415 VVSSIEQK ddPTM_A549_PD325901_60min_R1 2 VVSSIEQK 8 0 P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ; 182.39 4.9569e-09 30111000.0 12086.7 11468.900000000001 12214.400000000001 12457.4 14548.3 13934.1 13918.2 13290.3 13602.9 12379.9 14113.4 False True 13313.732886241734 12435.424453108055 13043.342635153977 13226.86530519187 13526.477596910354 13820.625309436135 14447.864717331271 13025.214540461344 13031.217418358983 11598.231001233045 12377.54127221388 1.075636315277695 1.0046764684214073 1.0537910840527547 1.0686181539854462 1.092824277409254 1.1165889093387074 1.1672645155920442 1.0523264882744858 1.0528114697231936 0.9370383621559563 1.0 13.59543713944286 -9.668573859397327 0.9274191402935844 1.0087116867310757 1.0783126122551125 0.4203790668832592 0.04468805440622296 0.4372444249787312 0.7863003278221872 0.01385890521792787 0.008771671120370706 2.1449942908762054e-10 9.668573859397327 0.06960092552403685 VVSSVSSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VVSSVSSSPR 10 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VVSSVS(0.001)S(0.047)S(0.952)PR;VVSSVS(0.001)S(0.061)S(0.938)PR 133.12 9.145100000000001e-07 81029000.0 5505.0 6330.3 5745.9 5376.1 8029.5 5492.7 6104.7 6429.4 9536.4 9308.400000000001 10437.8 True False 6434.109415671972 6652.485231102571 6560.7550204507725 6693.2447413423015 6848.371186614333 6073.933868240825 7213.84496948327 7340.787139211711 7376.42062650152 7205.625975035434 7845.806191375043 0.8200698894072911 0.8479033344483706 0.8362117111257555 0.8530984041767739 0.8728702977831394 0.7741631286938936 0.9194523537190489 0.9356319746059362 0.9401736987348065 0.9184047884023232 1.0 12.937705982784777 -8.4696288865536 0.669656688660338 0.9853751768632912 0.8331214602576595 0.6385507749324171 0.03738363321920914 0.2042942957661792 0.19107022982401894 0.008420163965488866 0.010171304504865667 3.3913382909368007e-09 8.4696288865536 -0.1522537166056317 VVSSVSSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 VVSSVSSSPR 10 0 P29375;P29375-2 P29375 KDM5A Lysine-specific demethylase 5A 1 VVSSVS(0.001)S(0.01)S(0.989)PR;VVSSVSS(0.244)S(0.756)PR 147.74 3.4428e-08 162351000.0 9318.5 10039.6 10153.3 11179.8 11546.8 12183.0 10966.7 12835.7 12853.2 12530.2 12766.1 True False 10264.507260082872 10885.67232597926 10842.36399475283 11870.350854831995 10735.79260229748 12083.785687260772 11384.04376970851 12579.68189408815 12313.024702207007 11739.041033582695 11195.950630975503 0.9168053342147084 0.9722865600945215 0.9684183462506153 1.0602360841062168 0.958899601843106 1.0792996580235823 1.0168001043352777 1.1235921190367093 1.0997748300301475 1.048507752535514 1.0 13.450689409961281 -5.740608390928549 0.6987302139694546 1.052501454923507 0.8885030294909957 0.5114763903563566 0.04355649591348041 1.3067200464879345 0.6387631476208198 0.008405502004560719 0.14776604719133068 1.8171534755373198e-06 5.740608390928549 -0.1639984254325113 VVST(ph)PPSVTEPPEKELSTVSK ddPTM_A549_MK2206_60min_R1 1 VVSTPPSVTEPPEKELSTVSK 21 1 Q92667;Q92667-2;I3L2A2;I3L2N7;I3L364;I3L0K6 Q92667 AKAP1 A-kinase anchor protein 1, mitochondrial 1 VVS(0.167)T(0.81)PPS(0.011)VT(0.011)EPPEKELS(0.001)TVS(0.001)K 53.266000000000005 0.0036473 4929100.0 1303.6 1661.0 1728.4 1578.4 2009.1 1611.2 1376.0 1459.0 2099.4 2087.0 2079.8 True False 1523.6158100399598 1745.5378052953845 1973.51310975602 1965.1080708570694 1713.5640514386769 1781.6961145719986 1626.0013887675043 1665.8177180001067 1623.8892520529027 1615.5452505155495 1563.328260440113 0.9745974972722791 1.1165523258717114 1.2623792198322 1.2570028448816286 1.0960999649275636 1.1396813834033872 1.0400895511923691 1.065558501150066 1.0387384998693368 1.0334011681338993 1.0 10.6104050252425 -7.874552825469147 1.2047337937447757 1.0188431278469665 1.1545105892847298 0.3167097452080583 0.07520353582597177 0.35275512136534176 1.032658822884389 0.013663969883514647 0.021230169849760956 1.3348952095242696e-08 7.874552825469147 0.13566746143776331 VVT(ph)DTDETELAR ddPTM_A549_MK2206_60min_R1 1 VVTDTDETELAR 12 0 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 1 VVT(0.945)DT(0.055)DETELAR 107.39 0.00013917 3878600.0 2084.9 2554.2 1638.3 1779.2 1995.4 1608.5 1624.7 2380.6 3481.3 2393.4 2521.1 True False 2436.780149088919 2684.197870129721 1870.6355749324737 2215.104079871323 1701.8793032903964 1778.7104023641143 1919.886959542561 2718.057340281736 2692.7911084937455 1852.7292777115092 1895.041291179715 1.2858717962667487 1.4164323925937965 0.9871212746862903 1.1688948890883322 0.8980697735778252 0.9386130057655991 1.0131108849598622 1.4342997975467178 1.4209669842166919 0.9776722472142729 1.0 10.888013568378353 -11.271769236990956 1.8046760488011038 0.9996726462010126 1.207266443881658 0.10020020821963826 0.19155914495118942 0.6834814540034885 4.020927921648825 0.16337862017410432 0.03286685652263002 5.348484764285973e-12 11.271769236990956 0.20759379768064545 VVT(ph)DTDETELAR ddPTM_A549_PD325901_60min_R1 1 VVTDTDETELAR 12 0 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 1 VVT(0.977)DT(0.022)DET(0.001)ELAR 135.26 9.5256e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VVTDT(ph)DETELAR ddPTM_A549_MK2206_60min_R1 2 VVTDTDETELAR 12 0 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 1 VVT(0.022)DT(0.978)DETELAR;VVT(0.02)DT(0.98)DETELAR 117.2 2.3719e-05 3124900.0 1115.88 1652.96 1228.95 1342.8000000000002 1580.65 1445.0300000000002 1167.1 1101.68 2067.62 2130.7 2329.5 True False 1304.2132633533224 1737.0886036370011 1403.2335895826548 1671.7860602805822 1348.138478874393 1597.942115466717 1379.1469628129032 1257.8465137535006 1599.3073713106703 1649.3733901645833 1751.0208590707016 0.744830226663029 0.9920433526753676 0.8013802818587645 0.9547493689868602 0.7699157162467354 0.9125774300111843 0.7876245195301907 0.7183503881393295 0.9133571213762991 0.9419495956432726 1.0 10.773980554669203 -9.314721003814768 1.826782303287887 0.9732414751339331 0.842803261528817 0.2626264604754365 0.08505568058890295 0.25864221396655007 1.7751100649798768 0.017207722933289142 0.015171173576013655 4.844835058732838e-10 9.314721003814768 -0.1304382136051161 VVTDT(ph)DETELAR ddPTM_A549_PD325901_60min_R1 2 VVTDTDETELAR 12 0 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 1 VVT(0.172)DT(0.827)DET(0.001)ELAR;VVT(0.045)DT(0.951)DET(0.005)ELAR 161.48 5.1196e-14 4483600.0 1503.56 1488.49 1422.96 1368.04 1896.03 1394.44 1597.37 1513.19 1986.11 1571.9099999999999 1917.83 True False 1656.2003043376292 1613.930276156109 1519.530622553602 1452.5407237557342 1762.8593937484056 1383.0841429651084 1658.1587894644026 1483.008238375409 1902.6407035835728 1472.6593343361617 1681.9490681260327 0.9846911156369962 0.9595595412138681 0.9034343853506863 0.8636056532758766 1.0481050985167586 0.8223103595557095 0.9858555296872715 0.8817200630383676 1.1312118420466957 0.875567139483567 1.0 10.715918304003948 -8.756105076919711 24.99999671712172 1.0619611486246603 0.9310238579329299 0.004020019603575897 0.08704360130722376 92.39004692273475 432998.80802745646 0.012004916913331236 0.013416632104640057 1.7534562043304711e-09 8.756105076919711 -0.13093729069173043 VVTS(ph)ENEAGK ddPTM_A549_MK2206_60min_R1 1 VVTSENEAGK 10 0 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 VVT(0.013)S(0.987)ENEAGK 104.79 0.00033623 2610700.0 1625.3 1842.9 1822.6 1904.9 2014.2 1740.6 1863.5 1783.4 2558.3 2453.8 2569.2 True False 1899.6109052300912 1936.6957383376646 2081.0720862308035 2371.6005855142107 1717.9138481946054 1924.7891366832312 2202.0738284652934 2036.2024114334397 1978.8491347656175 1899.484875761886 1931.1967336872497 0.9836444273614469 1.002847459585288 1.0776075010531918 1.2280471192523688 0.889559213842796 0.9966820589056277 1.1402638530052067 1.0543733716583612 1.024675063004785 0.9835791675844356 1.0 10.91527942578005 -9.154832908427842 2.0205306029619052 1.0084907941279733 1.0479590914706458 0.05174581504220477 0.08346146326436449 0.8365776493806699 7.054229983793776 0.016771257459827712 0.015804665927562855 7.001113068100045e-10 9.154832908427842 0.03946829734267254 VVTS(ph)ENEAGK ddPTM_A549_PD325901_60min_R1 1 VVTSENEAGK 10 0 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 VVT(0.014)S(0.986)ENEAGK 112.13 0.00014233 7775500.0 4402.5 3511.5 4159.1 4414.2 5309.0 4533.5 4307.5 4067.2 4349.8 4884.3 4964.8 True False 4849.438559050793 3807.4264286103203 4441.3615367000375 4686.855108624428 4936.114155055717 4496.580679077135 4471.424269654442 3986.0765053433256 4166.993032836964 4575.904464440146 4354.161074460266 1.1137480851353025 0.8744339870527831 1.0200269261399755 1.0764082973676858 1.1336544676789635 1.032708850724941 1.0269312947290796 0.9154637224433487 0.9570139830790474 1.0509267769813424 1.0 12.088179063117632 -8.030775099649329 21.767356216485616 0.9741675433117417 1.0382127630968228 0.13996847177810867 0.06990759282154346 187.8160617410692 132842.8894803972 0.010732588341336908 0.013871153064365848 9.31590176594367e-09 8.030775099649329 0.06404521978508104 VVTS(ph)PR ddPTM_A549_MK2206_60min_R1 1 VVTSPR 6 0 A0A075B754;Q96QE3 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 VVT(0.009)S(0.991)PR 81.297 0.042351 32297000.0 2913.5 2924.2 2439.9 2009.8 3350.9 2643.2 2354.1 2263.3 3521.8 3744.8 3744.2 True False 3405.227571763905 3073.029289731947 2785.9145085013392 2502.2010902233505 2857.9870489103896 2922.90166958584 2781.809498036032 2584.1297060655534 2724.117923158956 2898.8470791234467 2814.411805336989 1.209925130823623 1.0918904205505888 0.9898745106236372 0.8890671526741073 1.0154828953924826 1.0385479708559782 0.9884159428129412 0.9181775393228703 0.9679173168593138 1.0300010373842032 1.0 11.45861772412859 -5.495709689022636 2.362698521933066 0.9796483720809778 1.216506913750312 0.7263759786353514 0.042799723732199445 0.13553163459892378 1.2330882429503227 0.005716231336523541 0.05294123872571139 3.193672002001661e-06 5.495709689022636 0.23685854166933418 VVTVSSRS(ph)PR ddPTM_A549_MK2206_60min_R1 2 VVTVSSRSPR 10 1 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 VVTVS(0.003)S(0.018)RS(0.98)PR;VVTVS(0.001)S(0.008)RS(0.991)PR 124.38 6.1176e-06 12623000.0 2909.6 2725.9 2409.2 2388.86 3088.4 2073.0299999999997 2252.5 2103.04 3172.7 4150.6 4141.9 True False 3400.6693471097487 2864.6366667397283 2750.860786868899 2974.1308072399997 2634.1004511787414 2292.3966586340553 2661.750093167736 2401.152360289887 2454.088515760807 3212.976577283109 3113.3519193753755 1.092285560763724 0.9201133507947452 0.8835688537969064 0.9552825649843956 0.8460657578688422 0.7363114475969595 0.8549467461750218 0.7712434772782206 0.7882464235694772 1.0319991637590782 1.0 11.604252946481001 -3.612500928859473 1.0284900665515953 0.8727805463177443 7.010755645204852 0.3388564750094094 0.0880165227321917 45.86277839677825 2.119865688429176 0.014513021570169902 604.8948629037043 0.0002440613848105251 3.612500928859473 6.137975098887107 VVTVSSRS(ph)PR ddPTM_A549_PD325901_60min_R1 1 VVTVSSRSPR 10 1 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 VVTVS(0.004)S(0.02)RS(0.976)PR 84.954 0.00024217 11137000.0 3874.5 3956.1 3271.5 4111.5 4103.2 4083.9 3709.7 4418.3 3564.3 4448.6 4607.7 True False 4267.83638774385 4289.494430934159 3493.5236631276393 4365.458017106006 3815.0053872715407 4050.6420724127297 3850.8746635257316 4330.173540410702 3414.5048661871324 4167.714636797173 4040.9821106168547 1.0561384017343165 1.061498000613363 0.8645234172032388 1.0802962986736955 0.9440787617565526 1.0023904985301706 0.9529551376652585 1.0715646399507823 0.8449690626484633 1.0313618132204432 1.0 11.980490249402594 -8.756453507954886 24.991019381359866 0.9267909478284247 1.00020257703579 0.01958263721443676 0.07697626285547307 169.96631994322746 851932.2594675053 0.01323588262223644 0.014783507548940164 1.7520499844318305e-09 8.756453507954886 0.07341162920736533 VVVGT(ph)PRPR ddPTM_A549_MK2206_60min_R1 2 VVVGTPRPR 9 1 A0A1C7CYW6;A0A1B0GWB1;A0A1B0GTQ2;P0DI83 A0A1C7CYW6 RAB34 Ras-related protein Rab-34, isoform NARR 1 VVVGT(1)PRPR;VVVGT(1)PRPR 96.34200000000001 0.00035403 3931400.0 955.3199999999999 783.05 1138.44 1073.44 998.9 836.1500000000001 997.5899999999999 1196.53 1452.69 1313.42 1580.87 True False 1116.554660668437 822.903900323028 1299.8879105939855 1336.4328481885527 851.9631332348284 924.6308380085501 1178.8391899858832 1366.1417917194435 1123.658034469244 1016.7175097901943 1188.2963492075983 0.9396264336021891 0.6925073033101313 1.0939088649567936 1.1246629252709037 0.7169618368372084 0.7781146837866914 0.9920414135514078 1.1496642168684936 0.9456042133080207 0.8556093860493476 1.0 10.214678959365962 -7.896207417207608 19.008166849090752 0.9908550709149794 0.8931291952297309 0.10283580391207414 0.14341379325684533 4.1076808953261414 736.422173870314 0.021839188640856738 0.030175303153429242 1.2699674292745418e-08 7.896207417207608 -0.09772587568524849 VVVHHVT(ph)VSPLR ddPTM_A549_PD325901_60min_R1 1 VVVHHVTVSPLR 12 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 VVVHHVT(0.635)VS(0.365)PLR 49.928999999999995 0.026846 1685900.0 1312.1 1341.1 1619.6 1400.6 1550.0 1506.1 1471.9 1341.4 1898.4 1699.5 1973.9 True False 1445.3034260830327 1454.1192035908584 1729.515795445981 1487.1118810066093 1441.1333472097117 1493.834820945863 1527.9139599545858 1314.644724692058 1818.6168498638315 1592.1932799615147 1731.1228135830465 0.8348936394013374 0.8399861593766123 0.9990716902784388 0.8590447017035217 0.832484752613756 0.8629282736179479 0.8826144210947907 0.7594173644855562 1.0505417845540903 0.9197459980704789 1.0 10.75749236422626 -8.779489287720962 24.998301568322848 1.0238669713530277 0.8629150934703829 0.4362016515856333 0.06325473765377472 107.67540230249448 149124.93062553363 0.009613280818639863 0.010244086776877782 1.6615396606888646e-09 8.779489287720962 -0.16095187788264487 VVVPATEEEAEVDEFPTDGEMS(ph)AQEEDRRK ddPTM_A549_PD325901_60min_R1 1 VVVPATEEEAEVDEFPTDGEMSAQEEDRRK 30 2 B5MCF9;O00541;B3KXD6 B5MCF9 PES1 Pescadillo homolog 1 VVVPATEEEAEVDEFPT(0.003)DGEMS(0.997)AQEEDRRK 130.61 4.4139999999999995e-28 5953700.0 1204.2 1300.1 1395.7 1376.5 1299.6 1230.9 1384.2 1471.9 1570.0 1230.9 2226.1 True False 1326.449497514814 1409.6639897013472 1490.4205950259056 1461.52327874168 1208.320579376607 1220.875958503595 1436.8764884633044 1442.5417998167884 1504.0183598220688 1153.1807639332924 1952.303812410569 0.6794278068212173 0.7220515478893585 0.7634163215537841 0.748614672291754 0.6189203604968925 0.6253514185356952 0.7359902077377748 0.738892067231912 0.7703813055433271 0.5906769000821778 1.0 10.930961863460476 -10.141059339291166 0.5306502413235543 1.0177479280408925 0.696244268038576 0.0 0.1278342443780551 0.2910188921491195 0.149502972409785 0.04349863184692888 0.012649862450842727 7.22671055587347e-11 10.141059339291166 -0.32150366000231656 VVVS(ph)PTK ddPTM_A549_MK2206_60min_R1 5 VVVSPTK 7 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VVVS(0.961)PT(0.039)K;VVVS(0.983)PT(0.017)K;VVVS(0.989)PT(0.011)K;VVVS(0.995)PT(0.005)K;VVVS(0.984)PT(0.016)K 131.62 0.0056728 2428603900.0 32709.100000000002 36100.7 32658.7 30143.4 44493.0 32521.9 32016.899999999998 34728.41 49332.200000000004 42044.600000000006 45440.399999999994 True False 38229.596419283596 37938.071431443124 37290.19474519147 37528.53435318867 37948.13863952071 35963.34587170998 37833.95629653363 39651.26846879512 38158.535467335525 32546.69565875713 34156.294588759934 1.1192547926982717 1.1107197630251053 1.0917517603757532 1.0987296720862239 1.111014502492568 1.0529053664838897 1.107671565433328 1.1608773418251128 1.1171743283855105 0.9528754816825918 1.0 15.059863853677182 -10.653756664378854 0.9087124337887922 0.9995101280689017 1.1070337264843582 0.7365870532226206 0.029259504176120155 0.25630543408385215 0.3746913327328099 0.01805459500526142 0.00475302137695662 2.2194396256666193e-11 10.653756664378854 0.10752359841545645 VVVS(ph)PTK ddPTM_A549_PD325901_60min_R1 4 VVVSPTK 7 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VVVS(0.986)PT(0.014)K;VVVS(0.863)PT(0.137)K;VVVS(0.864)PT(0.136)K;VVVS(0.895)PT(0.105)K 116.73 0.0070945999999999995 3745991000.0 22288.9 22917.1 22300.4 23281.2 25731.199999999997 25873.1 24921.5 25349.699999999997 25598.699999999997 24848.5 26772.0 True False 24551.652719779042 24848.40444456943 23813.83924719903 24719.22684855852 23923.929279820975 25662.398051798973 25869.901320068057 24844.080347045063 24522.87566087718 23279.561469328448 23479.21372169074 1.045676103586789 1.0583150159587242 1.014251990269979 1.052813230526635 1.0189408198844152 1.0929837070349315 1.1018214505270565 1.0581308489088552 1.0444504637828769 0.9914966380591422 1.0 14.519096475441572 -10.097324693957573 0.8653933102708459 1.0035996882629787 1.054543733303117 0.4335590746174791 0.025300923966865056 0.4413451878519876 0.6596638862721013 0.011778535256353802 0.0052442964306943975 7.992364940321661e-11 10.097324693957573 0.050944045040138164 VVVS(ph)PTKK ddPTM_A549_MK2206_60min_R1 6 VVVSPTKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VVVS(0.84)PT(0.16)KK;VVVS(0.932)PT(0.068)KK;VVVS(0.986)PT(0.014)KK;VVVS(0.874)PT(0.126)KK;VVVS(0.911)PT(0.089)KK;VVVS(0.682)PT(0.318)KK 112.83 0.0010437 12974401000.0 405435.60000000003 446317.0 398559.2 378833.8 512434.2 410100.19999999995 371253.39999999997 400141.20000000007 529816.9 547985.1 528798.4 True False 473863.2173312663 469032.6289259601 455080.8876497752 471648.0980064944 437055.80799748097 453496.7309615186 438705.3371981521 456862.4404810307 409814.21809373464 424194.8853178198 397483.1631866118 1.1921592188517312 1.1800062804314482 1.1449060735086336 1.18658635557115 1.0995580403799154 1.1409206048524108 1.1037079751531191 1.1493881572703026 1.0310228358058366 1.0672021474244615 1.0 18.600534225647326 -8.503766507996515 0.5162413137258274 0.9975134205275034 1.1752603553422447 0.6626609098564538 0.03541428134463786 0.20837471675603844 0.12666059762649085 0.009979268895711976 0.011734474046829568 3.1349707419549996e-09 8.503766507996515 0.17774693481474135 VVVS(ph)PTKK ddPTM_A549_PD325901_60min_R1 7 VVVSPTKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VVVS(0.917)PT(0.083)KK;VVVS(0.596)PT(0.404)KK;VVVS(0.5)PT(0.5)KK;VVVS(0.873)PT(0.127)KK;VVVS(0.884)PT(0.116)KK;VVVS(0.786)PT(0.214)KK;VVVS(0.941)PT(0.059)KK 128.03 0.00085542 38368906000.0 92330.1 112195.6 97898.8 132517.3 119888.9 100606.70000000001 103858.99999999999 100727.0 147607.3 108628.2 109499.40000000001 True False 101703.38378217304 121650.71696249257 104542.80128130836 140702.59265237564 111468.31725825183 99787.392391245 107811.41107882552 98717.92096619697 141403.87849921262 101769.3969133955 96031.6679738871 1.0590608903078533 1.2667770906111075 1.0886284023488544 1.4651686846742622 1.16074540419898 1.0391092282014631 1.122665193195869 1.0279725745578043 1.4724713366184903 1.0597483003322257 1.0 16.551222615539572 VVVSPT(ph)KK ddPTM_A549_MK2206_60min_R1 2 VVVSPTKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VVVS(0.358)PT(0.642)KK;VVVS(0.362)PT(0.638)KK 87.913 0.0016664000000000002 10293700000.0 15662.099999999999 16871.6 16510.1 15988.900000000001 21784.8 17755.4 13942.9 16133.900000000001 23551.1 23599.0 24325.6 True False 18305.479578418897 17730.292375569905 18851.480440513107 19906.181217769008 18580.28477815005 19634.264642919352 16476.144450179094 18420.92973299651 18216.81345337862 18267.969509782688 18284.88216759401 1.0011264721662463 0.9696694905145742 1.030987253170451 1.0886688268108393 1.0161555654473715 1.0737977123919797 0.9010801545869127 1.0074404398210242 0.9962773227854853 0.999075046934604 1.0 14.158363709166903 VVVSPTKK ddPTM_A549_MK2206_60min_R1 2 VVVSPTKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 78.264 0.0071458 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VVVSPTKK ddPTM_A549_PD325901_60min_R1 2 VVVSPTKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ; 67.993 0.008722200000000001 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VVVTT(ph)PLHR ddPTM_A549_MK2206_60min_R1 2 VVVTTPLHR 9 0 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 VVVT(0.009)T(0.991)PLHR;VVVT(0.143)T(0.857)PLHR 94.69200000000001 0.00083772 24608000.0 1508.88 1757.15 1604.25 1452.45 2171.7799999999997 1429.51 1478.8200000000002 1336.33 2402.2 2137.4 2303.1 True False 1763.542055425818 1846.5814296055285 1831.7567729264615 1808.3003152029592 1852.3140389395687 1580.7797993680597 1747.5024518438665 1525.7588698389873 1858.1055355251415 1654.5598555112301 1731.1767076736337 1.0186955771809552 1.0666625893361148 1.0580992482205862 1.0445498181597908 1.0699739840127125 0.9131244617381212 1.0094304319702703 0.8813420739060842 1.0733193944262776 0.9557429049138711 1.0 10.75753727815514 -4.871050206876905 17.69118803356611 1.0228965785712953 0.2177943066802 0.0 0.06444525423132677 3546.230292043565 788436.6289226523 0.008368091426392572 71796.07554043566 1.345704774046819e-05 4.871050206876905 -0.8051022718910954 VVVTT(ph)PLHR ddPTM_A549_PD325901_60min_R1 3 VVVTTPLHR 9 0 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 VVVT(0.127)T(0.873)PLHR;VVVT(0.035)T(0.965)PLHR;VVVT(0.097)T(0.903)PLHR 74.533 0.0019097 38353200.0 2191.57 2266.81 1979.44 2171.59 2422.38 2523.5699999999997 2585.57 2539.08 2253.08 2613.0 2868.29 True False 2414.0565730514386 2457.8420340703856 2113.7767017396854 2305.724182261276 2252.2403855573307 2503.0188826069675 2683.965281228194 2488.4360575302735 2158.3908828967546 2448.0147340626304 2515.5085135883864 0.9596694107815894 0.9770756174322227 0.840297971690969 0.9166036090937923 0.8953419848873807 0.9950349478389948 1.0669672818556686 0.989237779990856 0.8580336227198049 0.9731689321816384 1.0 11.296634357009001 VVYAFS(ph)PK ddPTM_A549_MK2206_60min_R1 1 VVYAFSPK 8 0 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 VVYAFS(1)PK 51.276 0.029548 13117000.0 6368.7 4233.1 4148.6 3224.2 4332.6 4271.6 3287.9 3407.2 5377.3 6723.1 14724.0 True False 7443.580860234348 4448.546708968025 4736.933862030681 4014.129144739837 3695.2802793605147 4723.617876741405 3885.268870733049 3890.1810341123805 4159.350135783591 5204.347040604261 11067.624438273024 0.6725545216816042 0.40194232590550116 0.42799915089726565 0.36269112374815965 0.33388197259222513 0.4267960033416594 0.35104813073502705 0.3514919625082073 0.3758123668707185 0.4702316264551835 1.0 13.434057973944807 -10.632930148346071 0.7848771791316436 1.0232512939015788 0.40270828810786097 0.12796098569682535 0.17747185375300464 0.1962760956611576 0.20329643497078698 0.07474296779325662 0.017486334856988306 2.3284657365272886e-11 10.632930148346071 -0.6205430057937178 VVYAFS(ph)PK ddPTM_A549_PD325901_60min_R1 1 VVYAFSPK 8 0 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 VVYAFS(1)PK 82.749 0.0034783 20348000.0 8869.9 5202.7 5062.2 5272.6 5528.8 5372.6 4313.0 4265.9 4181.4 5795.3 10779.0 True False 9770.365718324732 5641.149787877238 5405.751333481503 5598.276527056585 5140.476161324554 5328.847326879852 4477.133575164161 4180.813277966191 4005.6702992101905 5429.383768967912 9453.251333710763 1.0335455361779204 0.5967417546342619 0.5718404327413072 0.5922064620341632 0.5437786407934972 0.5637052415899404 0.4736078008630195 0.4422619404032138 0.4237346662862725 0.5743403594492892 1.0 13.206594897199595 -10.875557523733784 1.1310058523566837 0.9993431146302647 0.5632367650018574 0.0 0.19765666779489954 0.32172100449146923 0.7324755109271843 0.10926003566730566 0.026537579085595574 1.3318106279282247e-11 10.875557523733784 -0.43610634962840733 VWEDRPS(ph)SAGSTPFPYNPLIMR ddPTM_A549_PD325901_60min_R1 1 VWEDRPSSAGSTPFPYNPLIMR 22 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VWEDRPS(0.399)S(0.399)AGS(0.094)T(0.108)PFPYNPLIMR 40.104 0.021879 7933400.0 2785.9 2171.1 2451.3 2517.1 2791.9 2737.7 2388.8 2939.1 2850.6 2842.0 3159.0 True False 3068.7225171288155 2354.0662164761115 2617.6599588643703 2672.5755502511324 2595.806575532124 2715.4050788815402 2479.7070912015183 2880.477344820655 2730.799195228526 2662.5556349812455 2770.4630265509127 1.1076569106750438 0.8497013654092348 0.9448456571258508 0.9646674670040101 0.9369576676010627 0.9801268065512079 0.895051501296745 1.039709722604277 0.985683320462224 0.9610507736304258 1.0 11.435911398223148 -8.270963744463131 24.95016346774625 0.9965357217373477 0.9505123487926483 0.09575319565419627 0.062143055077443145 1016.3868169967171 2662536.1547292685 0.008940714591019515 0.01088313038836273 5.358413884669715e-09 8.270963744463131 -0.04602337294469938 VWEDRPSS(ph)AGSTPFPYNPLIMR ddPTM_A549_PD325901_60min_R1 1 VWEDRPSSAGSTPFPYNPLIMR 22 1 C9J0Q5;C9JE98;C9J7T7;A0A384DVL6;Q9Y618-2;Q9Y618;Q9Y618-4;Q9Y618-5 C9J0Q5;Q9Y618 NCOR2 Nuclear receptor corepressor 2 1 VWEDRPS(0.18)S(0.705)AGS(0.058)T(0.058)PFPYNPLIMR 55.994 0.0012279 8235400.0 2528.6 2309.6 2243.9 2796.7 2582.6 2343.8 2324.9 2464.8 2933.2 2859.9 2414.4 True False 2785.3016105430647 2504.2380975419037 2396.184547666854 2969.4458072334596 2401.2070854863246 2324.7128698844126 2413.3753417340954 2415.6376304018067 2809.927804477766 2679.325425926412 2117.444106142616 1.3154073831101478 1.182670225049726 1.1316400469394323 1.4023726995292214 1.1340120282374984 1.0978862975133648 1.1397586999973202 1.1408271053739478 1.327037533754154 1.2653582770632774 1.0 11.048108172115596 -11.026155697179478 1.31004463040887 0.9997452460917183 1.215343099671413 0.0 0.1214757953712272 0.3701482455514319 1.1295449188323203 0.07063238444957319 0.015831909507930755 9.415519839686042e-12 11.026155697179478 0.21559785357969463 VWS(ph)PLVTEEGK ddPTM_A549_MK2206_60min_R1 2 VWSPLVTEEGK 11 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(1)PLVTEEGK;VWS(0.99)PLVT(0.01)EEGK 131.37 8.502299999999999e-08 13035300.0 3077.79 2807.13 2279.0 2389.17 4391.5 3400.1 3689.09 3557.1600000000003 4890.5 4718.3 4146.1 True False 3597.245707259046 2950.000926778343 2602.19646906617 2974.5167572539153 3745.5161673848747 3759.8963251962823 4359.349900645578 4061.3983233456206 3782.8095585237274 3652.4327529983316 3116.508943461272 1.1542548962698806 0.9465722641251268 0.8349716032504325 0.9544387040809655 1.201830713575624 1.206444901460943 1.398792681083718 1.3031884063310055 1.2137971131000336 1.1719628659052874 1.0 11.605715137525985 -6.754183588689509 24.867787466981532 1.155529696385976 0.9608753996770453 0.42560740823040655 0.12323819093129888 166.97611005583616 572271.6636206269 0.021754584951603814 0.04455731172051298 1.76123136618995e-07 6.754183588689509 -0.19465429670893075 VWS(ph)PLVTEEGK ddPTM_A549_PD325901_60min_R1 2 VWSPLVTEEGK 11 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(1)PLVTEEGK;VWS(0.999)PLVT(0.001)EEGK 141.73 3.0846e-11 13703300.0 5400.0 4544.7 4444.5 4595.3 4828.1 5465.2 4629.1 4541.6 5584.1 5683.1 6020.2 True False 5948.204024730108 4927.697818626035 4746.130496949654 4879.141244316489 4488.990912040781 5420.693223181286 4805.262933640718 4451.014225183725 5349.419696230836 5324.268096116086 5279.753565192086 1.1266063749537338 0.9333196630829411 0.8989303077021517 0.92412291294868 0.8502273556166374 1.0266943629563272 0.910130155566436 0.843034465572029 1.0131949588514961 1.0084311758824258 1.0 12.36625487739498 VWS(ph)PLVTEEGKR ddPTM_A549_MK2206_60min_R1 4 VWSPLVTEEGKR 12 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(0.987)PLVT(0.013)EEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR 89.46600000000001 0.00011503 82277600.0 4905.299999999999 4134.66 3122.6499999999996 3474.92 6826.700000000001 5035.84 4964.4 4575.799999999999 6554.300000000001 6053.7 6339.700000000001 True False 5733.19471692929 4345.096533439258 3565.488724936144 4326.275555995087 5822.5014732748095 5568.729246279952 5866.367219765548 5224.433662799782 5069.761515066369 4686.164965522752 4765.377523181165 1.2030934986871828 0.9118053107655266 0.748206979948983 0.9078557858112883 1.2218342502669028 1.1685809191802508 1.2310393439404583 1.0963315366695585 1.063874056232592 0.9833774853570186 1.0 12.218374796645474 -6.712412817781531 24.999575752661205 1.0730587357083081 0.9266352209760276 0.2521753774278681 0.12758644634561392 139.6707100816469 71219.91742141309 0.019000844235983895 0.03955335118290276 1.9390418488258215e-07 6.712412817781531 -0.14642351473228055 VWS(ph)PLVTEEGKR ddPTM_A549_PD325901_60min_R1 2 VWSPLVTEEGKR 12 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(0.999)PLVT(0.001)EEGKR;VWS(0.998)PLVT(0.002)EEGKR 118.08 8.5338e-06 98049000.0 4473.5 4037.5 3985.9 4013.1 4210.1 3582.8999999999996 3379.5 2773.0 4580.8 4794.8 5187.4 True False 4927.646426783358 4377.754294607482 4256.407143163829 4260.9800725886225 3914.3971000565202 3553.7220503067083 3508.1087218333587 2717.6903396235825 4388.284906161105 4492.055509714311 4549.3826856379255 1.0831461688944268 0.9622743561291817 0.9356010336525438 0.9366062094622707 0.8604237916528743 0.7811437937559207 0.7711175261004545 0.5973756281710781 0.9645890902989114 0.9873989110424601 1.0 12.151455081228486 -5.089153678740929 1.4429988540490641 0.9150894907216591 1.2081150804559213 0.148745905803909 0.1198734413750417 3.285684420659704 4.472286205977171 0.02014050098889339 1.5500724576436697 8.144160450852573e-06 5.089153678740929 0.2930255897342622 VY(ph)GT(ph)VLSR ddPTM_A549_MK2206_60min_R1 1 VYGTVLSR 8 0 F8WE53;F8WAH1;Q9UDR5 F8WE53 AASS Alpha-aminoadipic semialdehyde synthase, mitochondrial;Lysine ketoglutarate reductase;Saccharopine dehydrogenase 2 VY(1)GT(1)VLSR 67.563 0.006129 7059000.0 101.45 98.291 0.0 0.0 128.41 139.54 0.0 104.0 119.67 0.0 105.1 True False 118.57227978563519 103.29359206519477 0.0 0.0 109.52105910369838 154.30603018084452 0.0 118.74231848664223 92.56493607372143 0.0 79.00076938756415 1.5009003166024881 1.3075010897483064 0.0 0.0 1.3863290187264754 1.9532218657750755 0.0 1.503052684260743 1.1716966403151572 0.0 1.0 6.303794798635561 VYALPEDLVEVKPK ddPTM_A549_MK2206_60min_R1 2 VYALPEDLVEVKPK 14 1 P13797-3;P13797;A0A0A0MSQ0;P13797-2 P13797-3 PLS3 Plastin-3 0 ; 154.07 7.059999999999999e-19 2882200.0 2958.5 2929.1000000000004 3260.6 3516.6000000000004 3842.6000000000004 3893.4 3637.6 3257.5 5126.9 3970.1 4602.2 False True 3457.8224716195327 3078.1786788023533 3723.0021092747515 4378.167157866171 3277.3586302614385 4305.397003770246 4298.50483414293 3719.2606006753554 3965.665335976955 3073.2516526458016 3459.346725741653 0.9995593809343314 0.8898150208237422 1.076215367939614 1.2656051864611897 0.9473923518200686 1.2445693782970562 1.2425770455898344 1.0751338028650421 1.1463624927989118 0.8883907559127148 1.0 11.75628390503353 -5.853432897097383 6.508492241920236 1.0999804932014554 0.9458643245210461 0.2004929108114638 0.11897596479174903 0.2091273291781745 12.155786380810786 0.014586272282476526 0.0464441708397748 1.4014161012151653e-06 5.853432897097383 -0.15411616868040934 VYALPEDLVEVKPK ddPTM_A549_PD325901_60min_R1 2 VYALPEDLVEVKPK 14 1 P13797-3;P13797;A0A0A0MSQ0;P13797-2 P13797-3 PLS3 Plastin-3 0 ; 146.47 3.8748000000000003e-13 7595100.0 5157.0 5646.5 6204.8 5965.0 6510.4 6593.6 5980.2 6332.2 6053.6 6440.5 5971.700000000001 False True 5680.534843617254 6122.350371393475 6625.895040493472 6333.444502502093 6053.1319636607095 6539.903907701111 6207.779783491003 6205.899303485196 5799.188243961065 6033.8457308573925 5237.218757725254 1.084647234801502 1.1690079514747387 1.2651552946341655 1.2093144845553436 1.1557913166662988 1.248736058247387 1.1853199323274601 1.1849608715181261 1.1073030385463407 1.152108783303554 1.0 12.354585151831248 -9.417438842091485 0.7434584041044415 1.015045338851036 1.194916034103768 0.2459915393742499 0.06242116620917219 0.2309391062921305 0.2771423619337558 0.016749378026061187 0.011265540339626456 3.824381052930408e-10 9.417438842091485 0.1798706952527318 VYEDSGIPLPAES(ph)PK ddPTM_A549_MK2206_60min_R1 4 VYEDSGIPLPAESPK 15 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK 235.88 2.2533999999999997e-64 448300500.0 12402.199999999999 13915.890000000001 13992.980000000001 12218.239999999998 18926.53 14577.52 13537.130000000001 15335.9 19102.05 17333.300000000003 18645.219999999998 True False 14495.388155321887 14624.149361428044 15977.394974863342 15211.70934849763 16142.462508822679 16120.103490625377 15996.65129355105 17509.81078922401 14775.466174705694 13417.695491500335 14015.097292106553 1.0342695347170967 1.043456856319115 1.1400131331133874 1.085380217593282 1.1517909702927485 1.1501956179572428 1.1413871027895417 1.2493534953257668 1.0542535571998768 0.9573744093133995 1.0 13.774694139071654 -8.977572383097437 16.359864622497387 1.0239297627157002 1.1251058229620279 0.44787868055714164 0.059363710830218595 2.62786878469629 1917.1182762963476 0.010428141553386255 0.010760821484887275 1.0529981711505405e-09 8.977572383097437 0.10117606024632764 VYEDSGIPLPAES(ph)PK ddPTM_A549_PD325901_60min_R1 6 VYEDSGIPLPAESPK 15 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK 290.95 2.3275999999999997e-123 740481100.0 52842.12 54530.3 51872.799999999996 51876.1 62921.3 50408.2 53711.49999999999 52016.7 55725.59999999999 57820.100000000006 59950.29999999999 True False 58206.61312208727 59125.75975510451 55393.20014448649 55080.36887782876 58501.92495470091 49997.69233198544 55755.52052456056 50979.18611218828 53383.64682299403 54169.32901836002 52576.79315626313 1.1070780400982576 1.1245600236472628 1.0535674927881724 1.047617505200912 1.1126948115840336 0.9509460225804879 1.0604587533296288 0.9696138362922476 1.0153461939820647 1.0302897108494944 1.0 15.682138529138607 -6.381128767063686 0.6026127508483172 1.004092531198504 1.1299539503545555 0.48978360602780724 0.03893805761637638 0.7329353314593119 0.363525476541101 0.006506041281872046 0.04989093193685062 4.157873124749448e-07 6.381128767063686 0.12586141915605142 VYEDSGIPLPAES(ph)PKK ddPTM_A549_MK2206_60min_R1 2 VYEDSGIPLPAESPKK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PKK;VYEDSGIPLPAES(1)PKK 109.72 2.2187e-07 153882000.0 3505.0 4743.5 4005.2999999999997 3478.3 5808.6 3553.7 3361.2 4528.8 5925.1 5380.6 5171.1 True False 4096.558310977341 4984.92388887336 4573.31176724473 4330.483656146822 4954.162634605894 3929.750175244856 3971.886531922481 5170.7712688683205 4583.074310440437 4165.118723011005 3886.973154900408 1.0539198877184688 1.2824693380217296 1.1765740551819959 1.1141017659685322 1.2745554026685397 1.0110052265965659 1.0218456299125762 1.3302822177584104 1.1790856606926745 1.0715583969907103 1.0 11.924431428504416 -10.655639953278667 0.9400313846127349 1.0004845905233062 1.1625143712837056 0.16685863418657454 0.10311542546952611 0.6102974000857383 0.9661859331525987 0.06560476015087091 0.017809485836263204 2.209836012313138e-11 10.655639953278667 0.16202978076039942 VYEDSGIPLPAES(ph)PKK ddPTM_A549_PD325901_60min_R1 4 VYEDSGIPLPAESPKK 16 1 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VY(0.003)EDS(0.027)GIPLPAES(0.97)PKK;VYEDSGIPLPAES(1)PKK;VYEDSGIPLPAES(1)PKK;VYEDSGIPLPAES(1)PKK 201.61 7.8604e-40 257239000.0 35346.6 34861.6 36198.0 34606.5 42409.8 35673.1 35990.1 36954.0 38628.1 39381.1 40576.3 True False 38934.960811208366 37799.50937879583 38654.61395625686 36744.064907936074 39431.08195386738 35382.5901009786 37359.72295003841 36216.92348014782 37004.69528983623 36894.57062517943 35585.672334358285 1.0941190163664918 1.0622114716180329 1.0862409340777153 1.0325522182830686 1.1080606144905212 0.9942931460877977 1.0498529464052662 1.0177389130057284 1.0398762440721927 1.0367816091409743 1.0 15.119008873189822 -2.000000000000127 0.09976066649721367 0.9761373455810312 1.3000157248535595 0.38433299555966993 0.02792544224470579 64.37828192963183 0.4410909788728795 0.15927623317543613 2.8661292274472725 0.009999999999997075 2.000000000000127 0.3238783792725284 VYEDSGIPLPAES(ph)PKKGPK ddPTM_A549_MK2206_60min_R1 4 VYEDSGIPLPAESPKKGPK 19 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PKKGPK;VYEDS(0.003)GIPLPAES(0.997)PKKGPK;VYEDSGIPLPAES(1)PKKGPK;VYEDSGIPLPAES(1)PKKGPK 162.86 2.5434999999999996e-27 480202000.0 12187.399999999998 13679.6 14256.0 12029.699999999999 15125.7 11884.8 10998.7 10736.1 17849.6 17034.6 19295.9 True False 14244.335166677678 14375.83320970424 16277.715165865442 14976.97704003375 12900.729566893626 13142.441647508245 12997.021420521185 12257.975052927302 13806.694099954027 13186.472028956485 14504.195490252128 0.982083782327045 0.9911499896265079 1.1222763218273808 1.0325961926050544 0.889448130753881 0.9061131075033372 0.8960870273195177 0.8451330555469657 0.951910370294797 0.9091488071722937 1.0 13.824182654788052 -6.681082284854409 10.56364770089735 0.9498625933130175 1.0358191502353928 0.42336565377420265 0.057178926930351634 0.4312086489820539 53.86635209915216 0.009350460746167284 0.01947058028054101 2.0840959764428218e-07 6.681082284854409 0.08595655692237536 VYEDSGIPLPAES(ph)PKKGPK ddPTM_A549_PD325901_60min_R1 4 VYEDSGIPLPAESPKKGPK 19 2 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PKKGPK;VYEDSGIPLPAES(1)PKKGPK;VYEDSGIPLPAES(1)PKKGPK;VYEDSGIPLPAES(1)PKKGPK 186.86 5.0245e-44 971644000.0 26536.800000000003 24340.899999999998 26592.6 24367.0 27932.5 28166.6 27724.1 28396.9 28509.5 29061.6 30136.9 True False 29230.796400640345 26392.19306739597 28397.33375029439 25872.09424852782 25970.61756189372 27937.22054820647 28779.15579670962 27830.50155256291 27311.344859456854 27226.64561631631 26430.25235354928 1.1059597921968 0.9985600104893361 1.0744253732591 0.9788818473030393 0.9826095193679134 1.0570167917619153 1.0888717751060333 1.0529790325223887 1.0333365150707408 1.0301318826666475 1.0 14.68990257931047 -10.166996380081079 0.9390720357072535 1.0028683152964804 1.0392720803545497 0.042322775217996544 0.04039703147035483 0.847213328232932 1.4828878769000862 0.0168281121558041 0.007509209951546357 6.807750330466415e-11 10.166996380081079 0.036403765058069304 VYEDSGIPLPAESPK ddPTM_A549_PD325901_60min_R1 1 VYEDSGIPLPAESPK 15 0 H0YIS7;Q8IXM2;Q8IXM2-3;F8W038;F8W1H0;Q8IXM2-2 H0YIS7;Q8IXM2-2 RNASEK-C17orf49;BAP18;C17orf49 Chromatin complexes subunit BAP18 0 155.48 5.547800000000001e-19 2263200.0 2351.5 2141.8 2023.0 2024.5 2487.3 2694.2 2369.2 2400.1 2686.7 2556.6 2788.8 False True 2590.222548917194 2322.2970026477537 2160.2929452872445 2149.5487670269026 2312.6006287191713 2672.259328459164 2459.3612024759855 2352.228122657975 2573.7873422509238 2395.1758396879136 2445.7952796597624 1.059051250306413 0.9495058813633868 0.8832680982145674 0.8788751801524161 0.9455413737820608 1.0925932152550828 1.005546630549598 0.961743667681457 1.0523314701175506 0.9793034844768813 1.0 11.256087935714598 -7.097377628163593 9.358867365502508 1.0226418809886209 0.9356183175346987 0.28867697575940143 0.05523235009530036 0.32313481334632205 28.945095961836962 0.008034206313674718 0.013934160454742087 7.991390846180487e-08 7.097377628163593 -0.08702356345392215 VYEGERPLTK ddPTM_A549_MK2206_60min_R1 2 VYEGERPLTK 10 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 106.29 0.00029985 12489900.0 4585.299999999999 5324.200000000001 4669.6 4750.5 7144.9 4700.1 4623.6 4662.6 7109.9 6617.5 6603.299999999999 False True 5359.186540178145 5595.179038503123 5331.819496248966 5914.372713258048 6093.8946747918 5197.461462326124 5463.648271152201 5323.537828613639 5499.519002177252 5122.602153946649 4963.518368191268 1.079715262972032 1.1272606694396168 1.0742016248832598 1.1915686161575094 1.227736904097012 1.0471325130242455 1.1007611669508506 1.0725331173809203 1.1079880428006366 1.0320506088533632 1.0 12.277147415937577 -11.028042910288558 0.33842240332235557 0.9413407084975033 1.128218842845336 0.3700192887489294 0.05054785344535919 2.7655848373335146 0.33923538860150776 0.19663071804068594 0.019796226564274214 9.37469376071716e-12 11.028042910288558 0.18687813434783263 VYEGERPLTK ddPTM_A549_PD325901_60min_R1 2 VYEGERPLTK 10 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 113.47 0.00010785 22291000.0 7804.7 8865.2 9219.2 7859.2 10145.1 9813.1 9264.900000000001 9660.5 9070.2 9255.400000000001 10082.6 False True 8597.027398483526 9612.301516422107 9844.870351553216 8344.644934461763 9432.543174694994 9733.185367122942 9617.480839447819 9467.813748984361 8689.011036470149 8671.012464463554 8842.504118867433 0.9722390041232631 1.0870564929579327 1.1133577343262995 0.9436970367541726 1.0667275975103685 1.1007272641643495 1.087642223307174 1.0707163515799436 0.9826414463217752 0.9806059853522755 1.0 13.110239270600522 -8.763574155355343 24.990809989593323 0.9918029019310858 1.057523317798148 0.2636637648241873 0.050025929697589254 54.32285650574534 635927.6151475254 0.008368296250764623 0.009124154423449077 1.7235577701072892e-09 8.763574155355343 0.06572041586706223 VYEHTSRFS(ph)PK ddPTM_A549_MK2206_60min_R1 4 VYEHTSRFSPK 11 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1;A0A096LNN3 P46100-4 ATRX Transcriptional regulator ATRX 1 VYEHT(0.144)S(0.102)RFS(0.755)PK;VYEHT(0.075)S(0.075)RFS(0.849)PK;VYEHT(0.002)S(0.081)RFS(0.916)PK;VYEHT(0.019)S(0.174)RFS(0.807)PK 98.59200000000001 0.00011627 64798000.0 11346.3 12497.1 11325.7 10759.1 15694.199999999999 11394.2 10777.4 10442.1 16201.8 16560.9 15463.5 True False 13261.27804959834 13133.1490105701 12931.854563274568 13395.079982994346 13385.603969981026 12599.926681142175 12735.514075074781 11922.299652590065 12532.118168958126 12819.781187955437 11623.486179111303 1.1409036708307299 1.1298803825458001 1.1125624760078046 1.1524150135840308 1.151599766517247 1.0840058212299202 1.095670771989381 1.0257077325059123 1.0781720712568779 1.1029204999610194 1.0 13.504755214126972 -9.143216793511803 0.1903980740512931 0.9566402298283356 1.1748302788754843 0.3509895142324797 0.037903702556378434 1.1121106643651124 0.1551139426421284 0.08839393801950379 0.061116140586774746 7.190899291232047e-10 9.143216793511803 0.21819004904714867 VYEHTSRFS(ph)PK ddPTM_A549_PD325901_60min_R1 5 VYEHTSRFSPK 11 1 P46100-4;P46100;P46100-2;P46100-5;P46100-3;A0A096LNL9;P46100-6;A0A096LNW1;A0A096LNN3 P46100-4 ATRX Transcriptional regulator ATRX 1 VYEHT(0.006)S(0.003)RFS(0.991)PK;VYEHT(0.001)S(0.021)RFS(0.978)PK;VYEHT(0.037)S(0.018)RFS(0.945)PK;VYEHT(0.017)S(0.169)RFS(0.814)PK;VYEHT(0.008)S(0.081)RFS(0.91)PK 117.2 7.522200000000001e-06 96755800.0 18582.88 17401.0 16524.39 17222.55 20966.2 17857.1 17061.469999999998 17528.0 19080.199999999997 19409.9 20887.1 True False 20469.400297606793 18867.443338814806 17645.8344746293 18286.347798251027 19493.606441463387 17711.67769810263 17710.75357724462 17178.39028955 18278.32554718282 18184.355601485746 18318.119114236004 1.117440069581102 1.0299880255801968 0.9632994722103191 0.9982655797908703 1.0641707437262948 0.9668939036616442 0.9668434552039042 0.9377813400175863 0.9978276390275103 0.992697748501575 1.0 14.16098375613543 -5.338515110281927 3.0295944576170957 0.993124665301026 1.1274337944275996 0.5943012548515211 0.031068260529042845 0.16640848254375357 2.3657391449711542 0.004270912272166415 0.048139800556669554 4.586536877158821e-06 5.338515110281927 0.13430912912657356 VYFQS(ph)PPGAAGEGPGGADDEGPVRR ddPTM_A549_MK2206_60min_R1 2 VYFQSPPGAAGEGPGGADDEGPVRR 25 1 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B 1 VY(0.007)FQS(0.993)PPGAAGEGPGGADDEGPVRR;VY(0.005)FQS(0.995)PPGAAGEGPGGADDEGPVRR 43.622 0.029112 22124000.0 3111.1 4146.8 3552.4 3221.7 4154.0 3374.8 3818.4 3223.3 5928.9 5382.3 4969.5 True False 3636.1776209077343 4357.854407585127 4056.1837370384687 4011.01664462761 3542.952102770524 3731.919095989064 4512.153853829824 3680.21264594225 4586.013616507789 4166.434691830307 3735.435998777355 0.9734279002766721 1.1666253709102485 1.085866211699544 1.07377469348704 0.9484708355142927 0.9990585027318251 1.2079323150782655 0.9852163568447753 1.2277050438044814 1.1153810942535283 1.0 11.867060928362916 VYFQS(ph)PPGAAGEGPGGADDEGPVRR ddPTM_A549_PD325901_60min_R1 1 VYFQSPPGAAGEGPGGADDEGPVRR 25 1 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B 1 VYFQS(1)PPGAAGEGPGGADDEGPVRR 76.259 2.4373e-06 31735000.0 2695.3 2769.7 2020.3 2970.7 2749.1 2413.5 2462.8 2943.1 3088.4 3174.3 3500.4 True False 2968.9248718250105 3003.112339262996 2157.409707050825 3154.1933920507904 2556.0126998801393 2393.845256193374 2556.523201695872 2884.397561682716 2958.605288200303 2973.8741562705745 3069.8729908638225 0.967116516110197 0.9782529597154308 0.7027683925268055 1.0274670650668325 0.8326118727019095 0.7797864156978616 0.8327781668180675 0.9395820512011098 0.9637549491478441 0.9687287275796269 1.0 11.583963253208246 -8.545740546490947 2.9564847163442183 0.9831455806718498 0.8726960453628518 0.21076945661668 0.08837667056114362 0.2715095347451462 4.848965858361465 0.014765376518342333 0.01718817240674969 2.8461609354164087e-09 8.545740546490947 -0.11044953530899793 VYLDLT(ph)PVK ddPTM_A549_MK2206_60min_R1 4 VYLDLTPVK 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK 111.06 0.00035610000000000004 15178000.0 6289.65 6499.95 6488.400000000001 5875.37 8506.4 7828.48 6792.34 6898.849999999999 9468.3 8975.9 8837.599999999999 True False 7351.189152821297 6830.7696914688295 7408.552685339597 7314.835913755382 7255.119828359938 8656.884557475545 8026.420256526944 7876.783114342037 7323.74516776817 6948.2379559667115 6642.980014648302 1.1066101563773092 1.0282688908300848 1.11524536713992 1.1011377269878253 1.092148375030757 1.3031628182512098 1.2082559692830697 1.1857303645311443 1.1024788802041745 1.0459519584050068 1.0 12.697614858748869 -9.873068567128835 0.9848788183189341 1.0145212058225994 1.1397116914995158 0.2846736816406029 0.07007365968185521 0.4220940453907084 0.8373595454486942 0.026092031056008023 0.014927422834506085 1.3394651937576913e-10 9.873068567128835 0.12519048567691637 VYLDLT(ph)PVK ddPTM_A549_PD325901_60min_R1 2 VYLDLTPVK 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VYLDLT(1)PVK;VYLDLT(1)PVK 111.06 0.00035610000000000004 19424600.0 2628.1000000000004 2567.9 2466.46 2676.8 2960.2 2553.26 2078.45 2651.7 2506.54 2418.7 2729.5 True False 2894.902777295035 2784.3059450458327 2633.8488076288545 2842.139856546117 2752.2857641356054 2532.467097090655 2157.546552121479 2598.809763281591 2401.198840527647 2265.9828692220754 2393.788803726089 1.2093392586634748 1.1631376756010714 1.100284537854424 1.1872976647405735 1.1497613155561144 1.0579325515888052 0.9013103197588345 1.0856470542582426 1.0030955265518928 0.9466093523768365 1.0 11.225080158222692 -7.36689157259278 3.5370770479547375 1.001698278450191 1.1606078669372455 0.7310810206495295 0.0500505760104358 0.09216849765777574 2.142477157108012 0.006613632314467149 0.01089623716932473 4.296436796482086e-08 7.36689157259278 0.1589095884870544 VYNYNHLMPTR ddPTM_A549_PD325901_60min_R1 2 VYNYNHLMPTR 11 0 P61353;K7ELC7 P61353 RPL27 60S ribosomal protein L27 0 ; 50.148999999999994 0.031037000000000002 5821800.0 3443.7 4343.0 4885.5 4521.7 5904.8 5643.0 3667.2 4449.4 4933.0 4454.799999999999 4702.3 False True 3793.301888882051 4708.999851759828 5217.059408898089 4800.995139474218 5490.067218454129 5597.045278930688 3806.757302768838 4360.653226513226 4725.683164969592 4173.523167739075 4123.946910335663 0.9198231624599892 1.1418672340223082 1.2650646388833975 1.1641748169554995 1.3312652509406995 1.3572059487242827 0.9230859139403887 1.057398002768735 1.145912706375008 1.012021555679866 1.0 12.009810044941226 -7.766055917193841 24.999995618702773 1.0596654304110809 1.2018443174053905 0.31002331552648865 0.12111740719343068 134.52895168263163 728516.4533554657 0.019687546637974788 0.027691836005394755 1.7137366426890905e-08 7.766055917193841 0.1421788869943097 VYREELK ddPTM_A549_MK2206_60min_R1 1 VYREELK 7 1 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 107.66 0.0092785 16597000.0 2544.5 3332.7 2549.0 2982.4 3791.1 3378.3 3296.1 3604.7 4779.3 4439.3 3739.3 False True 2973.949392947744 3502.320194887373 2910.486529025742 3713.088133885024 3233.434212039802 3735.7894636659544 3894.9587045905305 4115.677263930765 3696.7961809738167 3436.4590467722483 2810.7286105701096 1.058070630427933 1.2460542016459517 1.0354918358465772 1.3210411421157753 1.1503900447307696 1.3291178129460928 1.385746987433448 1.4642741559797792 1.3152447970506775 1.2226221463890175 1.0 11.45672844592705 -4.105797948530878 16.22462382992955 1.1996629848899762 1.182744086773532 0.0 0.14816135307811557 0.0 0.0 0.022943306423236685 0.0 7.837942109216505e-05 4.105797948530878 -0.016918898116444314 VYREELKR ddPTM_A549_PD325901_60min_R1 2 VYREELKR 8 2 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 96.948 0.00082362 47760000.0 8658.4 8436.5 8821.8 9391.099999999999 9897.900000000001 11512.7 9925.2 10539.4 10895.099999999999 10441.5 10919.0 False True 9537.39439402281 9147.473462899326 9420.500397792885 9971.166918264442 9202.705649901298 11418.94438822352 10302.908917277844 10329.183399000643 10437.21683573084 9782.221908042464 9576.032221243882 0.9959651527555058 0.9552467297056684 0.9837582184502305 1.0412628829865438 0.9610144825416961 1.192450497701046 1.0759058323155417 1.0786496077243704 1.089931256974728 1.021531849730117 1.0 13.225212291303418 VYS(ph)PYNHR ddPTM_A549_MK2206_60min_R1 1 VYSPYNHR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 VYS(1)PYNHR 86.898 0.00083739 28436000.0 1622.3 1438.8 1397.9 1767.0 2383.7 1690.9 1831.3 1882.7 2336.4 2483.5 2553.4 True False 1896.1045785730512 1512.0287743883193 1596.1432400647645 2199.915079323643 2033.0608876682961 1869.829915671421 2164.0235052688445 2149.5784905269375 1807.2091304641333 1922.47562513434 1919.3203097450657 0.987904191367048 0.787793869898222 0.8316190017687942 1.1461948629178251 1.0592608629970357 0.9742146249261447 1.127494714811975 1.1199686053509514 0.9415880826604582 1.0016439754079887 1.0 10.906379783437995 -6.229364755019345 24.980943053392114 1.0091236773529193 0.8609744753061496 0.43012891605629666 0.08303764181456509 566.4121750282385 441142.85947162524 0.012400261035298956 0.03280492723284627 5.897055905062794e-07 6.229364755019345 -0.14814920204676973 VYS(ph)PYNHR ddPTM_A549_PD325901_60min_R1 4 VYSPYNHR 8 0 Q9NS56;Q9NS56-2 Q9NS56 TOPORS E3 ubiquitin-protein ligase Topors 1 VYS(1)PYNHR;VYS(0.999)PY(0.001)NHR;VYS(1)PYNHR;VYS(0.999)PY(0.001)NHR 106.2 0.00059168 124160000.0 23266.4 25298.0 23870.0 26018.4 28007.0 24852.0 23338.6 23792.1 25434.2 26207.100000000002 27597.100000000002 True False 25628.387800181583 27429.95124333871 25489.961741970583 27625.49747592631 26039.884938904757 24649.61355165434 24226.763194371964 23317.547900958612 24365.289023813024 24552.37923346834 24202.831652430577 1.0589003868730311 1.133336447455893 1.0531809710542999 1.1414159249069524 1.075902411455632 1.0184599019503113 1.0009887909929325 0.9634223067703295 1.0067123291074138 1.014442425004541 1.0 14.562888227542361 -7.265889731352505 2.9075565229171922 0.9998219857580435 1.0973512199144793 0.7377934758979494 0.027602535230101817 0.09286684221302524 1.581518050904388 0.003715481842484175 0.006483994732028455 5.421385234953026e-08 7.265889731352505 0.09752923415643577 VYS(ph)SMER ddPTM_A549_MK2206_60min_R1 2 VYSSMER 7 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 VYS(0.68)S(0.32)MER;VYS(0.5)S(0.5)MER 71.501 0.020465999999999998 4135600.0 2465.5 2382.17 2285.7 2128.75 2750.8 2241.6000000000004 2654.8999999999996 2211.0 3588.7 3411.2 3504.0 True False 2881.616124312307 2503.412277929263 2609.846629813315 2650.2938455632184 2346.160963962725 2478.8046241463453 3137.2609644177646 2524.4160209035203 2775.8651799763034 2640.607550818708 2633.860094519742 1.094065751748952 0.9504727616846844 0.9908827865396528 1.0062394168458948 0.890769015728804 0.9411299519302413 1.1911266551118058 0.9584472714234362 1.0539151968443694 1.0025618127223257 1.0 11.362962999161919 VYT(ph)HEVVTLWYR ddPTM_A549_MK2206_60min_R1 5 VYTHEVVTLWYR 12 0 E5RIU6;A0A087WZZ9;P06493 E5RIU6 CDK1 Cyclin-dependent kinase 1 1 VYT(1)HEVVTLWYR;VY(0.001)T(0.999)HEVVTLWYR;VYT(1)HEVVTLWYR;VY(0.001)T(0.999)HEVVTLWYR;VYT(1)HEVVTLWYR 125.61 3.0941e-06 210718600.0 4197.82 3611.92 3507.9500000000003 3560.6899999999996 6414.799999999999 5145.59 4611.24 5049.66 7232.980000000001 5659.3099999999995 5791.889999999999 True False 4906.3093891546105 3795.751300242327 4005.430058648826 4433.059209845445 5471.191417634177 5690.092918433795 5449.042619142638 5765.464768935176 5594.7215786956285 4380.867940438507 4353.603864968022 1.126953563376315 0.8718641883763136 0.9200263007112721 1.0182504764654343 1.256704005998112 1.306984533944406 1.251616543018358 1.3242970531443894 1.2850782368406233 1.00626241530376 1.0 12.087994427134028 -6.619676686447608 5.398213519065974 1.1811058573783038 0.96382966826991 0.43192845631283683 0.12004576939579359 0.18832449801983578 8.576648747311374 0.020493198516441193 0.04328067292421769 2.400619411797553e-07 6.619676686447608 -0.21727618910839375 VYT(ph)HEVVTLWYR ddPTM_A549_PD325901_60min_R1 4 VYTHEVVTLWYR 12 0 E5RIU6;A0A087WZZ9;P06493 E5RIU6 CDK1 Cyclin-dependent kinase 1 1 VYT(1)HEVVTLWYR;VYT(0.999)HEVVT(0.001)LWYR;VYT(1)HEVVTLWYR;VY(0.001)T(0.999)HEVVTLWYR 139.3 8.064399999999999e-09 189706300.0 4380.26 5118.999999999999 5446.58 6050.36 5890.459999999999 5416.53 6507.19 6124.539999999999 6204.55 5893.83 5481.900000000001 True False 4824.940770623018 5550.396095132064 5816.217671746215 6424.07699583546 5476.734410583817 5372.419575524796 6754.8246763209945 6002.3812450913165 5943.794340403829 5521.692567952678 4807.6610526272425 1.0035942047092385 1.154489893188069 1.2097811405751715 1.3362167019500877 1.1391681631946466 1.117470536444937 1.4050126667373286 1.2485034155665353 1.2363172601686891 1.1485195207210455 1.0 12.231119472114901 -10.674437203023707 0.950746808548939 1.0006523884004856 1.2106260633253954 0.12635487911397747 0.11076998545791539 0.49056803666117754 0.7927688504726729 0.06912707103965632 0.018533105112516254 2.1162296601541773e-11 10.674437203023707 0.2099736749249097 VYT(ph)PSISKPLAK ddPTM_A549_PD325901_60min_R1 2 VYTPSISKPLAK 12 1 Q5VV42-2;Q5VV42 Q5VV42-2 CDKAL1 Threonylcarbamoyladenosine tRNA methylthiotransferase 1 VY(0.002)T(0.907)PS(0.083)IS(0.008)KPLAK;VY(0.003)T(0.891)PS(0.094)IS(0.013)KPLAK 57.159 0.0058727 6522300.0 4975.7 4730.9 4674.9 5102.9 5942.6 6128.9 5824.6 5657.200000000001 6588.4 6109.3 5861.6 True False 5480.829401083256 5129.589546094993 4992.166826457404 5418.094543473247 5525.212276857055 6078.988270430322 6046.258340343416 5544.362708012457 6311.51245977816 5723.557755380341 5140.660359743851 1.0661722458856153 0.997846421884715 0.9711139186612503 1.0539685885303693 1.0748059374092487 1.182530617668199 1.1761637449716071 1.0785312236206015 1.2277629755902897 1.1133895948857309 1.0 12.32773798192835 -6.750438421747609 2.562665881153259 1.117992034637167 1.0116666660403064 0.3976115523474383 0.06113970604545124 0.3259375784295068 4.371222227837272 0.012823848256121775 0.02817369701410044 1.7764851367778733e-07 6.750438421747609 -0.10632536859686059 VYT(ph)PVASR ddPTM_A549_MK2206_60min_R1 4 VYTPVASR 8 0 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 VYT(0.999)PVAS(0.001)R;VYT(1)PVASR;VYT(0.999)PVAS(0.001)R;VYT(1)PVASR 120.99 0.0012609000000000001 72219000.0 13710.300000000001 14116.3 13842.800000000001 12586.3 17570.6 13545.499999999998 13089.0 14045.3 19321.399999999998 20765.600000000002 20612.2 True False 16024.263455347398 14834.759374407718 15805.917192623601 15669.944065020476 14985.988015633073 14978.875819224797 15467.101873239717 16036.264286927266 14945.133749935656 16074.636537664459 15493.621872220276 1.0342490340543646 0.9574752434746143 1.020156379378489 1.0113803082490571 0.9672359464575949 0.9667769061849633 0.9982883279842973 1.035023599980837 0.9645991023397797 1.0375002481818618 1.0 13.91938681523931 -6.736970033070258 24.979747107507393 0.9858624377145915 1.0033867504367975 0.0 0.030160714603082495 468.8012872714411 478577.19857308595 0.003761158349199222 0.007826966277113899 1.8324408590041544e-07 6.736970033070258 0.017524312722206004 VYT(ph)PVASR ddPTM_A549_PD325901_60min_R1 2 VYTPVASR 8 0 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 VYT(1)PVASR;VYT(0.999)PVAS(0.001)R 108.26 0.0018694000000000002 101433000.0 8783.8 9451.7 9665.0 9012.2 10745.1 9742.0 9869.1 10324.0 9789.8 10168.9 10677.3 True False 9675.524909708201 10248.22792974404 10320.925020366394 9568.863125808777 9990.401244582623 9662.66438194981 10244.674001078736 10118.079720978676 9378.368750946556 9526.833918564667 9364.059788981347 1.033261761217432 1.094421454015393 1.1021848699119785 1.0218712120002076 1.066887810385223 1.031888368901684 1.0940419253979565 1.0805227592507025 1.001528072469384 1.0173828588509073 1.0 13.192918430665998 -8.769622551522444 24.938426486386767 1.0007215826552216 1.0662178711907835 0.5001954048423654 0.026247666850583797 87.22125071053975 265808.06179148826 0.0043159347753350275 0.004633764873129954 1.6997202498794433e-09 8.769622551522444 0.06549628853556189 VYTDVNTHRPR ddPTM_A549_PD325901_60min_R1 2 VYTDVNTHRPR 11 1 P68400;A0A2R8Y4D6;Q8NEV1;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8YDP2;A0A2R8Y4H0;A0A2R8Y5A0;A0A2R8YF43;A0A2R8YCC9;A0A2R8Y7T1;A0A2R8YEW1;A0A2R8YDY7;A0A2R8YCK2;A0A2R8YF47;V9GY80;A0A2R8YEL7;A0A2R8Y797;A0A2R8Y3W6;V9GYA2 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ; 100.88 0.00092391 9185400.0 831.4 995.8 862.5799999999999 757.85 871.15 1031.75 781.45 786.1800000000001 741.24 790.5999999999999 1044.21 False True 915.8031159556688 1079.7195607604033 921.1198659149138 804.6606732977715 809.9634293043484 1023.3477700756222 811.1885073758475 770.4990231537215 710.0882605315355 740.6813810753597 915.7787897925701 1.0000265633615562 1.1790178728696772 1.0058322776000888 0.8786627101071345 0.8844531434144816 1.117461751115045 0.8857908879496837 0.8413593236072268 0.7753927787434072 0.8087994495298683 1.0 9.838855341141905 -6.043582631714558 4.340724355083593 0.9024370832252284 1.0916299108053713 0.377669980173011 0.09628368356187046 0.17811388029028874 7.337360671233353 0.015186067957204794 0.04472293996444927 9.045183217804333e-07 6.043582631714558 0.18919282758014289 VYTHEVVT(ph)LWYR ddPTM_A549_MK2206_60min_R1 1 VYTHEVVTLWYR 12 0 E5RIU6;A0A087WZZ9;P06493 E5RIU6 CDK1 Cyclin-dependent kinase 1 1 VYT(0.274)HEVVT(0.726)LWYR 169.82 1.3138e-15 7838100.0 4423.1 4260.8 4206.1 4118.4 7682.3 5427.0 4945.0 4840.9 8116.1 6166.8 5784.9 True False 5169.611145587412 4477.656520651759 4802.5882266517 5127.4081848820015 6552.243846681276 6001.281537848952 5843.44249088322 5527.112399634482 6277.816308748478 4773.71559697139 4348.349674882207 1.188867393864191 1.029736993442933 1.1044622870127845 1.1791618816904135 1.5068346238412325 1.3801285514168133 1.3438299418828392 1.271082781488636 1.4437238902408507 1.0978223817983788 1.0 12.086252244791375 -6.525346580590699 24.99478155270575 1.2624758383318626 1.106880066946097 0.23521252068787002 0.14199230151636258 126.20182987632978 1278200.0069873375 0.02693196907880411 0.0563440432863567 2.983001140514161e-07 6.525346580590699 -0.15559577138576564 VYTHEVVT(ph)LWYR ddPTM_A549_PD325901_60min_R1 1 VYTHEVVTLWYR 12 0 E5RIU6;A0A087WZZ9;P06493 E5RIU6 CDK1 Cyclin-dependent kinase 1 1 VYT(0.055)HEVVT(0.945)LWYR 215.5 1.0447e-31 9973300.0 3004.9 3001.5 3940.4 4321.1 3679.1 3853.7 4667.7 4322.6 4311.6 4162.3 4006.4 True False 3309.955235909535 3254.4469387651657 4207.819239550103 4588.004533069874 3420.692708205969 3822.316744890161 4845.331877763448 4236.382351985901 4130.398445992889 3899.4916676574408 3513.6381986621022 0.9420307523893257 0.9262327976751763 1.197567592802334 1.3057703365181028 0.9735472222235277 1.0878515455420523 1.3790070587257441 1.2056968055501558 1.175533225807265 1.1098159364109432 1.0 11.778749928521531 -5.7494209777733865 24.92692634650774 1.1259965443422977 0.9341316399934197 0.3255723935756122 0.1172483588853387 234.47067282383122 486297.36058282637 0.018004735702548756 0.06864715542272008 1.7806518786054527e-06 5.7494209777733865 -0.19186490434887793 VYTY(ph)IQSR ddPTM_A549_MK2206_60min_R1 2 VYTYIQSR 8 0 Q92630;A0A0A0MTH5;Q9NR20-5;Q9NR20-2;Q9NR20;Q92630-2;Q9NR20-3;Q9NR20-4 Q92630 DYRK2;DYRK4 Dual specificity tyrosine-phosphorylation-regulated kinase 2;Dual specificity tyrosine-phosphorylation-regulated kinase 4 1 VYT(0.001)Y(0.999)IQSR;VY(0.001)TY(0.998)IQSR 160.63 0.00025573 20250900.0 5409.6 5916.7 5198.4 5752.5 7437.6 5836.8 5568.7 5994.1 8727.7 8186.9 8294.0 True False 6322.608227978043 6217.834757731005 5935.611287754971 7161.862758239534 6343.538892529146 6454.446301845732 6580.460707579649 6843.782031161369 6750.889885272985 6337.47360395101 6234.370897245074 1.014153365622177 0.9973475848988426 0.9520786275930226 1.1487707222238432 1.0175106674086896 1.0353003387555764 1.055513189067322 1.097750221146706 1.0828502180157675 1.0165377884000286 1.0 12.606028271466707 VYTY(ph)IQSR ddPTM_A549_PD325901_60min_R1 2 VYTYIQSR 8 0 Q92630;A0A0A0MTH5;Q9NR20-5;Q9NR20-2;Q9NR20;Q92630-2;Q9NR20-3;Q9NR20-4 Q92630 DYRK2;DYRK4 Dual specificity tyrosine-phosphorylation-regulated kinase 2;Dual specificity tyrosine-phosphorylation-regulated kinase 4 1 VYT(0.001)Y(0.999)IQSR;VYT(0.001)Y(0.999)IQSR 141.93 0.0010909000000000001 24684000.0 7285.0 7531.2 7647.7 7888.6 9053.8 8885.5 8776.7 8476.7 8934.8 9456.7 8781.4 True False 8024.567837066446 8165.880654748694 8166.718911356031 8375.860905689515 8417.892321914373 8813.139433978133 9110.702121294524 8307.625568657493 8559.30142760396 8859.602348109478 7701.343469881033 1.0419698677833942 1.0603189802771953 1.0604278257806603 1.0875843855616143 1.0930420588090468 1.144363898123125 1.183001661583503 1.0787241993747652 1.1114036740574278 1.1503969901820696 1.0 12.910894425049863 -4.289586256859582 14.506188116923674 1.072956290800014 1.0817444425361507 0.0 0.05388069653366733 0.0 0.0 0.007946046504707493 0.0 5.133502089624168e-05 4.289586256859582 0.008788151736136562 VYYS(ph)PPVAR ddPTM_A549_MK2206_60min_R1 2 VYYSPPVAR 9 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 VYYS(1)PPVAR;VYYS(1)PPVAR 123.75 9.6261e-05 67784000.0 8853.400000000001 9851.900000000001 9089.9 8070.4 13657.7 10956.6 9009.7 9436.7 15298.900000000001 15662.5 14898.2 True False 10347.637475151725 10353.319629132806 10378.984503801923 10047.648362294025 11648.670422245796 12116.020139597547 10646.645866554198 10774.381123681707 11833.723577323115 12124.330371921329 11198.565770597612 0.9240145289247628 0.9245219290773787 0.9268137292234743 0.8972263563138257 1.0401930622964197 1.0819260598003324 0.9507151259054524 0.9621215202370269 1.0567177815210178 1.0826681398571911 1.0 13.451026353962531 -6.762576700480429 24.999988785998983 1.0215490428829639 0.9192189408583907 0.6090344785211157 0.04108891274416035 15.993697411936807 351577.328322401 0.005797706375463184 0.01141150069982029 1.727520857172368e-07 6.762576700480429 -0.10233010202457316 VYYS(ph)PPVAR ddPTM_A549_PD325901_60min_R1 2 VYYSPPVAR 9 0 O94964-2;H0YDM2;O94964;O94964-3 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 VYYS(1)PPVAR;VYYS(1)PPVAR 127.76 5.1733999999999996e-05 107311000.0 16110.8 15575.099999999999 14986.400000000001 16475.1 18454.1 16062.3 16200.0 15909.599999999999 19096.4 18062.7 19215.3 True False 17746.35655585589 16887.66833781819 16003.467224544116 17492.729509333138 17157.947679188866 15931.493954238582 16816.49986498015 15592.270547160246 18293.844717519834 16922.218039400337 16851.939915822655 1.0530749957868915 1.0021201370390593 0.9496513341777412 1.0380246782691667 1.0181586075487306 0.9453804151817651 0.9978969750058727 0.9252507797348791 1.0855631345055619 1.00417032839713 1.0 14.040627056763345 -8.777262980497223 24.995456030684775 1.0404048050782568 0.9913301840430506 0.12775813430886973 0.042716697071842724 291.95045067714335 461172.7977493725 0.008009088066841426 0.008539889692150941 1.6700790168110101e-09 8.777262980497223 -0.04907462103520621 VYYTAGYNS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 VYYTAGYNSPVK 12 0 Q9Y5Z4-2;Q9Y5Z4 Q9Y5Z4-2 HEBP2 Heme-binding protein 2 1 VYYTAGYNS(1)PVK;VYYTAGYNS(1)PVK 159.08 6.7099e-14 7176300.0 4709.5 6039.4 5597.3 4880.9 6052.2 5149.4 4440.1 4671.6 7730.4 7084.200000000001 7272.6 True False 5504.34846377968 6346.779663636926 6391.081305969321 6076.720719111928 5161.929397300858 5694.306090104921 5246.808696414676 5333.81360617498 5979.476742912142 5483.874299809424 5466.612706450987 1.0069029505756208 1.1610077399753012 1.1691117789316583 1.1116062259067612 0.944264698175786 1.0416516398509885 0.9597915524952175 0.9757072418685716 1.093817518086829 1.0031576397095163 1.0 12.416431453088766 -6.587236030909408 14.751051255496876 1.0275088443093383 1.1210651731171346 0.41193492727052206 0.05806118470907832 1.470251026882488 335.86486820244005 0.008896916500962372 0.018521054289747027 2.586806652127077e-07 6.587236030909408 0.0935563288077963 VYYTAGYNS(ph)PVK ddPTM_A549_PD325901_60min_R1 2 VYYTAGYNSPVK 12 0 Q9Y5Z4-2;Q9Y5Z4 Q9Y5Z4-2 HEBP2 Heme-binding protein 2 1 VYYT(0.001)AGYNS(0.999)PVK;VYYTAGYNS(1)PVK 143.25 9.5059e-12 9829500.0 5684.799999999999 6076.3 7078.4 6222.4 7306.1 7055.1 7185.5 6847.200000000001 8316.0 7663.2 7479.9 True False 6261.916711071424 6588.371125776707 7558.782789877023 6606.743515904278 6792.944740676696 6997.645604710951 7458.948134556473 6710.627224475516 7966.507439668996 7179.344244190108 6559.919718992776 0.9545721562630483 1.0043371577706288 1.1522675754692946 1.0071378612722857 1.0355225416874 1.0667273235754453 1.1370486917638278 1.0229739862587648 1.2144214839403842 1.0944256258813545 1.0 12.67946244375549 -7.488562746289586 4.26098004007498 1.0993269950792073 1.0354228934668628 0.15497551205320637 0.06902758322119729 0.4070982279427189 16.597102839860103 0.013535908637152894 0.021432239225581032 3.2466633141898765e-08 7.488562746289586 -0.0639041016123445 WADPQIS(ph)ESNFSPK ddPTM_A549_MK2206_60min_R1 1 WADPQISESNFSPK 14 0 D6RAW2;Q9BW91-2;Q9BW91 D6RAW2 NUDT9 ADP-ribose pyrophosphatase, mitochondrial 1 WADPQIS(0.423)ES(0.325)NFS(0.252)PK 60.448 0.0070057 1717200.0 1092.5 1213.1 1375.2 1167.4 2085.3 1618.4 1341.5 1616.5 2118.7 2515.6 2166.6 True False 1276.8872909394427 1274.8416084309638 1570.2240387274228 1453.413052406578 1778.555132380206 1789.658013793025 1585.2331853427381 1845.643825323627 1638.8178328686693 1947.324212839923 1628.5734248819847 0.7840526386042268 0.7827965193054441 0.9641714734729936 0.8924455171629121 1.0920939180308005 1.0989114684360721 0.9733876048343432 1.1332886789905543 1.0062904182459118 1.1957239281250316 1.0 10.66939305034318 -5.907720355929821 1.3097055453788775 1.0208459363861273 0.7549850143278661 0.6006541669246521 0.08110945715310319 0.24675781835631652 0.6825975239626647 0.008887510033045012 0.06364691973335572 1.2367435215458682e-06 5.907720355929821 -0.2658609220582612 WAHDKFS(ph)GEEGEIEDDES(ph)GTENR ddPTM_A549_PD325901_60min_R1 1 WAHDKFSGEEGEIEDDESGTENR 23 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 WAHDKFS(1)GEEGEIEDDES(0.834)GT(0.166)ENR 63.706 0.00021979 9253200.0 2006.2 2346.4 2061.4 2155.5 2677.3 2187.9 2422.9 2708.4 2669.0 2432.5 2588.7 True False 2209.8679471136174 2544.139362691517 2201.299000205201 2288.6403395043167 2489.255684183587 2170.0824677959326 2515.104785361752 2654.3788373013035 2556.8312116975176 2278.911534866953 2270.3063111213496 0.9733787622790511 1.1206150246020836 0.9696044051068754 1.0080755747773575 1.0964404547481938 0.9558544841132409 1.107826187612319 1.1691721175678065 1.1262053931544804 1.003790336001556 1.0 11.148671244611219 -7.795214127322523 24.995494565929786 1.074360539630953 1.0257562793991386 0.16635415625176708 0.0663300856044015 353.4654966698679 261586.32304346326 0.011314288642496114 0.01563339958036951 1.60245511119079e-08 7.795214127322523 -0.04860426023181441 WAHDKFS(ph)GEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A549_MK2206_60min_R1 3 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 WAHDKFS(1)GEEGEIEDDES(0.549)GT(0.45)ENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDES(0.796)GT(0.199)ENREEKDNIQPT(0.004)T(0.001)E;WAHDKFS(1)GEEGEIEDDES(0.978)GT(0.022)ENREEKDNIQPTTE 185.81 1.2117999999999997e-76 198678000.0 6859.5 1361.6 1323.2 8559.0 12922.900000000001 10585.1 10526.599999999999 9551.4 17375.0 11268.9 11694.599999999999 True False 8017.215901326415 1430.899624136179 1510.849656809283 10655.955384228111 11021.958528862118 11705.208256179289 12439.146961482556 10905.340199935717 13439.590242173552 8723.247663409047 8790.508065459635 0.912031004536393 0.1627778068663157 0.17187284802636538 1.2122115473732786 1.253847723793176 1.3315735756130327 1.4150657582989365 1.240581331446114 1.5288752529539744 0.9923485193859417 1.0 13.10173083596211 -6.275794816340394 19.661421824827315 1.270012363934367 0.39028264866898493 0.7084056803187266 0.23702613043964937 18.123417232342078 24822.7143072069 0.035459918493437034 0.08308388808506922 5.299137440106603e-07 6.275794816340394 -0.879729715265382 WAHDKFS(ph)GEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A549_PD325901_60min_R1 3 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 WAHDKFS(1)GEEGEIEDDES(0.499)GT(0.499)ENREEKDNIQPT(0.001)TE;WAHDKFS(1)GEEGEIEDDES(0.834)GT(0.166)ENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDES(0.789)GT(0.211)ENREEKDNIQPTTE 194.2 1.7039999999999996e-78 827240000.0 13367.4 8502.9 8778.8 13923.699999999999 13690.7 16458.5 14708.899999999998 14723.5 17340.2 16035.800000000001 15191.5 True False 14724.448607440223 9219.469223930142 9374.58215921288 14783.735325982956 12729.11246235097 16324.467432798294 15268.655238518922 14429.828242137697 16611.45169616984 15023.296851313255 13323.041806852863 1.1051866999221251 0.6919943176330798 0.7036367741780224 1.1096366385624317 0.9554208901306307 1.225280808201143 1.1460337256215252 1.0830731038249497 1.2468212542593347 1.127617631852348 1.0 13.701635883780115 -6.277506643911252 23.478631214723183 1.1144808517332834 0.8194447908043792 0.48061245509654926 0.12851536714449163 223.04104446143637 325923.62309498456 0.019185326003442933 0.04474183944486946 5.278291318994885e-07 6.277506643911252 -0.2950360609289042 WAHDKFS(ph)GEEGEIEDDESGTENR ddPTM_A549_MK2206_60min_R1 4 WAHDKFSGEEGEIEDDESGTENR 23 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR 184.46 3.4367e-50 55949400.0 6604.289999999999 8126.5 7126.9 7328.900000000001 14689.3 10854.0 9328.6 11534.800000000001 14466.8 11025.8 10556.5 True False 7718.932692611849 8540.104138912066 8137.601586392143 9124.480829006829 12528.523428798044 12002.563075697904 11023.48586864574 13169.893223843468 11190.092898732457 8535.064122249329 7935.0297054217 0.9727667039907614 1.0762535813920069 1.025528811925182 1.1498987612828244 1.5788880311610916 1.5126046809247626 1.3892179711833739 1.6597156800616624 1.4102143677025807 1.0756184209893567 1.0 12.954019908577536 -6.5280390464594085 24.843354879449883 1.2980641286171066 1.039610658785223 0.3519468913492446 0.19561132397205255 167.03198122478216 804145.3431929164 0.03530569792604087 0.07369329886537912 2.9645648400530894e-07 6.5280390464594085 -0.25845346983188366 WAHDKFS(ph)GEEGEIEDDESGTENR ddPTM_A549_PD325901_60min_R1 2 WAHDKFSGEEGEIEDDESGTENR 23 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR 241.69 1.1295999999999997e-98 53565000.0 4549.6 5684.9 4849.700000000001 5334.700000000001 6832.2 5170.700000000001 5286.0 4460.7 5818.200000000001 6160.3 6271.3 True False 5011.472042761502 6163.986474158281 5178.8298056152 5664.212303017253 6352.329841810442 5128.591533540123 5487.161622610191 4371.727839148547 5573.681287335512 5771.337606676629 5499.969857046132 0.9111817288127853 1.1207309556908684 0.9416105797344484 1.029862426565976 1.1549753920328005 0.9324762983873033 0.9976712173395765 0.7948639633993322 1.0134021516854217 1.0493398612508469 1.0 12.42520799653407 WAHDKFS(ph)GEEGEIEDDESGTENREEK ddPTM_A549_MK2206_60min_R1 2 WAHDKFSGEEGEIEDDESGTENREEK 26 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENREEK;WAHDKFS(1)GEEGEIEDDESGTENREEK 149.4 3.0444999999999997e-33 19172500.0 2962.2 3832.8999999999996 3286.9 3175.0 5598.200000000001 4930.799999999999 4506.9 5168.299999999999 6717.9 4679.2 6013.1 True False 3462.1469411632193 4027.9782383604315 3753.0318447448844 3952.8751425311666 4774.712195890699 5452.573983199858 5325.7453917414705 5900.922352254935 5196.306376281886 3622.1654701544617 4519.881316882606 0.7659818252818829 0.8911690276722921 0.8303385822823721 0.8745528622104379 1.0563799934428038 1.2063533533133866 1.1782931936395786 1.3055480749491983 1.1496554913671526 0.8013850842996679 1.0 12.142069175489967 -6.77801149184168 3.3852078498557177 1.110067095918003 0.8377270179466855 0.506609036472462 0.12413685004816069 0.12677435587576766 3.036901684497788 0.015155433360915871 0.03149387729945964 1.6672030962007162e-07 6.77801149184168 -0.27234007797131754 WAHDKFS(ph)GEEGEIEDDESGTENREEK ddPTM_A549_PD325901_60min_R1 4 WAHDKFSGEEGEIEDDESGTENREEK 26 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENREEK;WAHDKFS(1)GEEGEIEDDESGTENREEK;WAHDKFS(1)GEEGEIEDDESGTENREEK;WAHDKFS(1)GEEGEIEDDESGTENREEK 217.57 7.233699999999999e-82 57543000.0 9079.3 10667.699999999999 11824.1 11181.400000000001 13388.099999999999 10532.4 10668.7 9959.0 13627.2 11697.4 12032.3 True False 10001.0238521726 11566.704517296406 12626.554530089421 11872.049683198142 12447.76604243764 10446.62762640609 11074.703216636646 9760.359932315643 13054.496173864516 10958.824167709232 10552.403379034045 0.9477484410843364 1.0961203909507113 1.1965572274441656 1.1250564688216929 1.1796143111027562 0.9899761458287205 1.0494958180465626 0.9249418906509898 1.2371111778954293 1.0385145235712538 1.0 13.365283999157622 -11.314192452864019 1.9038924533215635 0.999486728861528 1.1102824686427204 0.0 0.09947935079551261 0.613605604842906 4.015606017000735 0.08229356061100435 0.016034927246745035 4.850734974965222e-12 11.314192452864019 0.11079573978119239 WAHDKFS(ph)GEEGEIEDDESGTENREEKDNIQPTTE ddPTM_A549_MK2206_60min_R1 3 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDESGTENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDESGTENREEKDNIQPTTE 247.26 7.655099999999998e-133 470640000.0 6257.0 7383.599999999999 6377.4 5953.299999999999 10972.8 10141.900000000001 9656.8 9517.3 13612.400000000001 9847.5 10560.3 True False 7313.02863103715 7759.393702094521 7281.811216245106 7411.8587672537915 9358.715655580265 11215.109126351643 11411.315560356128 10866.406420508853 10529.213134536021 7622.942910614226 7937.886060547039 0.9212816328246936 0.9775138674086464 0.9173489214511704 0.9337320680492363 1.1789934479023385 1.4128584160577828 1.4375761346679896 1.3689295030974524 1.326450525268739 0.960324052583956 1.0 12.95453913887896 -6.794608725132755 5.2337272690901875 1.2181152584149595 0.9378118050281864 0.4937658983999742 0.1469050164706362 0.15841643204732392 10.830951871604052 0.025360527041073225 0.049846138161013784 1.6046904753589918e-07 6.794608725132755 -0.2803034533867731 WAHDKFS(ph)GEEGEIEDDESGTENREEKDNIQPTTE ddPTM_A549_PD325901_60min_R1 4 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDESGTENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDESGTENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDESGTENREEKDNIQPTTE 200.47 4.1807e-89 934780000.0 8478.199999999999 8235.3 8704.699999999999 9244.3 9618.1 10462.7 8902.2 7920.1 11308.8 10770.4 10550.1 True False 9338.90062267903 8929.317632787863 9295.453287613382 9815.299415671432 8942.557836643695 10377.495240097132 9240.978092470754 7762.127392301747 10833.530463411342 10090.355105912031 9252.504582594107 1.0093375841442382 0.9650703280477995 1.0046418463926048 1.0608262150051846 0.9665013139757329 1.1215876898477162 0.9987542302713325 0.8389217560512133 1.1708754496367908 1.0905539160601008 1.0 13.175628229727886 -8.810662398097037 24.999999022483287 1.0806910762857767 1.0004749412629024 0.22533100487416258 0.07486860349138635 153.48819243439482 77954.80315150287 0.014957917189188808 0.015923931067306794 1.5464561210697302e-09 8.810662398097037 -0.08021613502287428 WAHDKFSGEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A549_MK2206_60min_R1 2 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFSGEEGEIEDDES(0.883)GT(0.114)ENREEKDNIQPT(0.003)T(0.001)E;WAHDKFSGEEGEIEDDES(0.957)GT(0.043)ENREEKDNIQPTTE 150.33 1.4351999999999998e-40 142756000.0 1691.71 1606.82 1911.81 1648.42 2773.48 2217.07 1936.13 1788.99 3369.4 2666.35 3338.1 True False 1977.2292896614777 1688.6002747168752 2182.9334056715206 2052.2829740003854 2365.5047660067403 2451.6788758280422 2287.899759327346 2042.5848110520965 2606.236279826163 2064.0196831395 2509.157643126811 0.7880052076750086 0.6729749640650755 0.8699865517222892 0.8179171123911183 0.942748564438121 0.9770924049127735 0.9118198553982674 0.8140520053202834 1.0386897319764958 0.8225946619150649 1.0 11.292987398618704 -5.855989839749764 0.3289508334168908 1.0219387952563639 0.5754974567526108 0.2258679717444274 0.09067432867678195 2.1567905685021573 0.21388300394604723 0.02542494545385355 0.3610307591644827 1.3931893960080793e-06 5.855989839749764 -0.4464413385037531 WAHDKFSGEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_A549_PD325901_60min_R1 8 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFSGEEGEIEDDES(0.79)GT(0.21)ENREEKDNIQPTTE;WAHDKFSGEEGEIEDDES(0.958)GT(0.042)ENREEKDNIQPTTE;WAHDKFSGEEGEIEDDES(0.793)GT(0.207)ENREEKDNIQPTTE;WAHDKFSGEEGEIEDDES(0.971)GT(0.029)ENREEKDNIQPTTE;WAHDKFSGEEGEIEDDES(0.87)GT(0.13)ENREEKDNIQPTTE;WAHDKFSGEEGEIEDDES(0.836)GT(0.164)ENREEKDNIQPTTE;WAHDKFSGEEGEIEDDES(0.906)GT(0.094)ENREEKDNIQPTTE;WAHDKFSGEEGEIEDDES(0.971)GT(0.029)ENREEKDNIQPTTE 268.21 1.3185999999999996e-168 545130000.0 18534.199999999997 19139.3 22651.500000000004 25225.7 25192.100000000002 30414.1 23416.8 25271.8 29803.600000000002 25935.600000000002 27799.300000000003 True False 20415.778339843106 20752.235980379195 24188.767004534853 26783.83419727861 23422.69380402695 30166.41765336272 24307.939138164627 24767.734123656435 28551.058336810842 24298.021789802813 24380.162334281995 0.8373930435703294 0.8511935111768548 0.9921495465402208 1.0985912985335913 0.9607275572193911 1.2373345689722675 0.997037624478168 1.0158970143045134 1.1710774499915437 0.9966308450553801 1.0 14.5734201116636 -5.880716036175968 2.418420751488546 1.0755291376717233 0.8331042226462524 0.5049437832662644 0.08036488114786511 0.1715236304186147 1.9626025209555822 0.011772929770537005 0.051238936853013846 1.3160850742949767e-06 5.880716036175968 -0.24242491502547092 WDEQTSNTKGDDDEES(ph)DEEAVK ddPTM_A549_MK2206_60min_R1 2 WDEQTSNTKGDDDEESDEEAVK 22 1 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 WDEQTSNTKGDDDEES(1)DEEAVK;WDEQTSNTKGDDDEES(1)DEEAVK 208.88 1.5144e-73 31801000.0 7960.3 9928.6 9841.9 9711.9 14813.9 12094.1 10523.8 12318.4 16173.6 13257.0 13364.8 True False 9303.804029350336 10433.923331520615 11237.62941154118 12091.315935983757 12634.79493385467 13373.889634586149 12435.838237726355 14064.570923517835 12510.30542393199 10262.23449261364 10045.951310284658 0.9261247384133209 1.0386197393609469 1.1186227231697339 1.2036008898037496 1.2577001961894494 1.3312715960403347 1.2378955316053566 1.4000237995498812 1.245308188098067 1.0215293878746514 1.0 13.29432656737827 -5.5884411125496625 1.790274899878738 1.1769969372086215 0.9159311866900336 0.36012143513204675 0.11506755416004334 0.5640368093539189 2.7928700813878766 0.020222046744833806 0.1997570854563755 2.5796387226101927e-06 5.5884411125496625 -0.26106575051858794 WDEQTSNTKGDDDEES(ph)DEEAVK ddPTM_A549_PD325901_60min_R1 2 WDEQTSNTKGDDDEESDEEAVK 22 1 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 WDEQTSNTKGDDDEES(1)DEEAVK;WDEQTSNTKGDDDEES(1)DEEAVK 249.88 2.5890999999999997e-110 70768000.0 11557.4 13031.099999999999 14097.7 14120.5 16737.7 13584.5 14523.5 13154.5 15904.2 14942.400000000001 14534.2 True False 12730.698739891806 14129.276529649422 15054.454698356878 14992.691215017732 15562.101693930314 13473.87233592662 15076.19974006414 12892.123177994388 15235.80178234532 13998.93431391406 12746.585539884865 0.9987536426956577 1.1084754019370937 1.1810578331938812 1.1762123407954752 1.220883949292579 1.0570573816624091 1.182763783515967 1.0114177744035158 1.1952849439303992 1.0982497446167458 1.0 13.63782322001477 -10.992047730138529 1.2124670429491984 0.9985360628185691 1.1343880968253857 0.07325121040434257 0.07755776867859908 0.4619106231550463 1.186397545785347 0.05308144510632904 0.01159694793344402 1.0184794482561649e-11 10.992047730138529 0.13585203400681656 WDEQTSNTKGDDDEES(ph)DEEAVKK ddPTM_A549_MK2206_60min_R1 3 WDEQTSNTKGDDDEESDEEAVKK 23 2 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK 197.96 2.5926999999999995e-61 171772600.0 8706.869999999999 9740.58 9797.88 9831.0 13926.400000000001 10914.4 10119.7 11553.99 14480.6 11876.1 14241.0 True False 10176.376793466268 10236.333916618969 11187.366713617395 12239.595441330366 11877.845008190528 12069.35456360763 11958.318498481476 13191.803465110388 11200.767220766527 9193.280761690334 10704.566668394868 0.950657519235405 0.9562585981963799 1.0451022502992102 1.1433994313350073 1.1096054026418234 1.1274958564406241 1.1171230811040955 1.2323528708601594 1.0463540998662457 0.8588185814969427 1.0 13.385938774711333 -5.795743040522644 4.4542220988809245 1.0653229398414312 0.9513947271532097 0.20948096950487716 0.09037753657400793 0.21617704773512256 9.541923418847654 0.0112196221624627 0.04029938127895263 1.6005047208498747e-06 5.795743040522644 -0.11392821268822151 WDEQTSNTKGDDDEES(ph)DEEAVKK ddPTM_A549_PD325901_60min_R1 4 WDEQTSNTKGDDDEESDEEAVKK 23 2 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK 231.07 1.1244999999999999e-88 351863000.0 39044.3 40751.9 49172.7 43794.2 61923.5 52530.5 52862.8 49402.8 60303.8 51447.0 45857.1 True False 43008.04859310554 44186.20563180548 52509.855121466164 46499.26827015538 57574.20698447778 52102.70902443176 54874.522781634114 48417.422398253126 57769.440998113445 48198.627640000035 40216.96741210759 1.0694005878761927 1.0986956122032943 1.3056642134000815 1.1562102083350139 1.431589965362348 1.295540474012615 1.3644619749502487 1.2039053542280946 1.4364444838951622 1.1984649947894757 1.0 15.295516677889308 -5.67625907990323 6.59980404356724 1.2428972749631078 1.0787000353859504 0.2309459663057254 0.1224112885878761 0.346100496303285 21.74058930240772 0.02295666936205687 0.09057232040205906 2.1073706155121883e-06 5.67625907990323 -0.16419723957715737 WDET(ph)PGR ddPTM_A549_MK2206_60min_R1 2 WDETPGR 7 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDET(1)PGR;WDET(1)PGR 93.14299999999999 0.012913999999999998 372460000.0 5948.9 8122.8 6614.400000000001 6739.7 11831.2 8380.5 8230.0 9476.7 13354.400000000001 9642.6 10409.1 True False 6952.928883358942 8536.215824716042 7552.4213799874005 8390.926802556633 10090.846152695869 9267.31894747433 9725.284469154474 10820.051246176567 10329.64972259468 7464.329962923458 7824.233193454747 0.8886402937447362 1.0909971129000724 0.9652602617091312 1.0724280060538003 1.2896913861331771 1.1844379785646952 1.24296965960703 1.3828896683738834 1.3202124051256299 0.9540014693283475 1.0 12.933733653677598 -6.550143101008355 6.281736250788873 1.1898712520359993 0.9962470402354129 0.35443806012303714 0.1280360940693904 0.17442604936454642 22.366559908546403 0.02063924582088873 0.043983400200377346 2.8174544207326557e-07 6.550143101008355 -0.19362421180058642 WDET(ph)PGR ddPTM_A549_PD325901_60min_R1 2 WDETPGR 7 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDET(1)PGR;WDET(1)PGR 111.17 0.008676399999999999 534810000.0 5654.6 6558.3 6624.9 6505.6 6783.6 6821.0 6665.200000000001 7067.0 8018.0 6771.2 8046.5 True False 6228.65082930349 7110.99095735585 7074.505552759988 6907.436136710409 6307.14333814955 6765.452037495341 6918.847833337385 6926.043141045751 7681.031343346081 6343.665276419775 7056.831510966101 0.8826412844949404 1.0076747540742026 1.0025045293722008 0.9788296809944328 0.8937641954960157 0.9587095889964263 0.980446794370208 0.981466417369168 1.0884532713314738 0.8989395972628669 1.0 12.784804849252058 -8.59150306480289 6.534391078115128 1.0417184663394048 0.9612302366125669 0.0 0.06000060035563797 0.16443416321765045 12.381693510743043 0.008070727644133482 0.009162094714580897 2.5615151874897496e-09 8.59150306480289 -0.08048822972683789 WDET(ph)PKTER ddPTM_A549_MK2206_60min_R1 2 WDETPKTER 9 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDET(0.887)PKT(0.113)ER;WDET(0.965)PKT(0.035)ER 94.191 0.00037823 87349000.0 4856.1 5461.1 5560.0 5637.5 8734.4 7160.799999999999 5939.9 6677.200000000001 8494.5 7958.5 8101.099999999999 True False 5675.690959753803 5739.046663755942 6348.491605093424 7018.687753076991 7449.581330389718 7918.551103045659 7019.102942689024 7623.713548067382 6570.509312929107 6160.669322581698 6089.373291014231 0.9320648757285291 0.9424691818819438 1.0425525422232795 1.152612496828549 1.22337406073999 1.3003885169481482 1.1526806794792408 1.251970142693879 1.07901240389136 1.0117082708121499 1.0 12.572078040466746 -5.872219440780523 3.325452471252002 1.099883846190136 0.9343306661117714 0.3527663009530536 0.09658911438313018 0.274912998507661 5.891057242003272 0.016557131881547102 0.06165035786325756 1.3420866588026026e-06 5.872219440780523 -0.1655531800783645 WDET(ph)PKTER ddPTM_A549_PD325901_60min_R1 3 WDETPKTER 9 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDET(0.551)PKT(0.449)ER;WDET(0.999)PKT(0.001)ER;WDET(0.99)PKT(0.01)ER 140.24 1.6384e-05 112631000.0 10277.8 11887.100000000002 12783.5 12746.100000000002 14490.5 14305.1 14071.5 14854.3 15979.899999999998 13735.6 13610.0 True False 11321.194689883538 12888.867634781076 13651.065183430286 13533.397648506609 13472.737269511175 14188.60400844079 14606.998632720262 14558.019333527076 15308.320374599156 12868.33187186784 11936.056280898365 0.9484870398945078 1.079826312096695 1.1436830442293158 1.1338248857090694 1.1287427733624218 1.1887179211065926 1.223770924748092 1.219667450531774 1.2825274960455346 1.0781058306889373 1.0 13.543038622867632 -5.1087344624828175 1.35624228630481 1.1528364643865676 0.8008829802452511 0.41843010443571593 0.07227629723823362 2.0071067064427046 2.465731553016296 0.01510479952344473 1.06290882546811 7.785124057302275e-06 5.1087344624828175 -0.35195348414131655 WDETPASQMGGS(ph)TPVLTPGK ddPTM_A549_MK2206_60min_R1 1 WDETPASQMGGSTPVLTPGK 20 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDET(0.001)PAS(0.048)QMGGS(0.475)T(0.475)PVLT(0.001)PGK 72.089 6.6677e-06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 WDETPKT(ph)ER ddPTM_A549_PD325901_60min_R1 1 WDETPKTER 9 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDET(0.136)PKT(0.864)ER 80.979 0.00064536 19803000.0 2725.9 2585.6 2979.8 2957.1 3511.0 3161.1 2866.9 3248.1 3757.0 3263.5 3165.4 True False 3002.6313612984827 2803.4975861639887 3182.0271469930426 3139.7533509386303 3264.39947229245 3135.357049659364 2976.0014483278746 3183.3140974148428 3599.1063553194335 3057.4420530476054 2776.075867123854 1.081609979344459 1.0098778709057923 1.1462320553543708 1.1310041588278217 1.1759042722685105 1.129420520091096 1.0720173333775467 1.1466956415398355 1.2964726209187785 1.1013539252496223 1.0 11.438831280398045 -5.772856259878402 24.70967504958816 1.1399228574719662 1.0457439272523994 0.1824311028501333 0.07027730357022534 280.8693432774537 607894.161064957 0.014335263279881098 0.04515237457679763 1.6871113227415857e-06 5.772856259878402 -0.0941789302195668 WDGS(ph)EEDEDNSK ddPTM_A549_MK2206_60min_R1 2 WDGSEEDEDNSK 12 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK 267.86 8.260599999999999e-77 644940000.0 21310.0 25130.0 23287.0 23010.0 32477.0 26316.0 25313.0 26236.0 34759.0 31452.0 33477.0 True False 24906.607020521285 26409.00966109152 26589.4467639947 28647.451032958135 27699.676322021758 29100.741652852965 29912.044443220813 29955.033344380237 26886.141998717172 24346.971355637314 25163.736981802893 0.9897817259229998 1.0494867944371356 1.0566573153750098 1.1384418400841847 1.1007775332436802 1.1564554848867283 1.1886964350665266 1.190404802197788 1.0684479025575506 0.9675419582251944 1.0 14.619058567457087 -9.55581565256125 1.392350220053102 1.0166081103331022 1.1087060038541716 0.3475858060714496 0.06084898300078043 0.35480551611466093 1.4040469147011903 0.01597869197071313 0.012277450619652724 2.780893438854688e-10 9.55581565256125 0.09209789352106945 WDGS(ph)EEDEDNSK ddPTM_A549_PD325901_60min_R1 2 WDGSEEDEDNSK 12 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK 310.14 3.227599999999999e-129 796090000.0 39030.0 40240.0 44371.0 42833.0 46992.0 42539.0 46912.0 44456.0 47835.0 43706.0 43533.0 True False 42992.296867632605 43631.1660222923 47382.28288449841 45478.69712919902 43691.4440335992 42192.576487760474 48697.26183123137 43569.29020494265 45824.6613006934 40946.39570108739 38178.71697842382 1.1260801899636679 1.142813836487744 1.2410653535391423 1.1912054864206327 1.1443926745440611 1.1051334310580692 1.2755080758411017 1.14119314773111 1.2002671888264496 1.0724927116913774 1.0 15.22048100036445 -10.75144024537476 0.8441989978242119 0.9919356389519408 1.1763438958633186 0.4888597383533786 0.05258769277928945 0.33490054681803244 0.39344526901662225 0.0406853600568487 0.008754125400458675 1.772391891953443e-11 10.75144024537476 0.18440825691137774 WDGS(ph)EEDEDNSKK ddPTM_A549_MK2206_60min_R1 4 WDGSEEDEDNSKK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK 284.91 8.222999999999999e-99 1716170000.0 76871.3 89820.3 83504.3 80102.9 122173.0 94419.2 88662.4 88336.9 122503.0 107431.5 115497.5 True False 89845.29611715607 94391.76961647999 95346.46538474862 99728.11409595599 104201.5135415945 104410.57707360727 104771.21041530534 100858.92609541032 94756.26609709287 83162.64953558275 86816.28318116258 1.0348899172482742 1.0872588200937994 1.0982555563428789 1.1487259122559974 1.200253106023366 1.2026612203119784 1.2068152030498194 1.161751256788366 1.0914573006927935 0.957915341319604 1.0 16.40567803813554 -9.609109591354041 0.9908657799042092 1.0166434097908248 1.1435548318377071 0.5334345455986491 0.05530666472183979 0.3077863138211027 0.6307280267360751 0.01765371207551973 0.011923373934970751 2.4597468249045956e-10 9.609109591354041 0.12691142204688233 WDGS(ph)EEDEDNSKK ddPTM_A549_PD325901_60min_R1 8 WDGSEEDEDNSKK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSKK;WDGS(0.999)EEDEDNS(0.001)KK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(0.999)EEDEDNS(0.001)KK;WDGS(0.997)EEDEDNS(0.003)KK 275.23 3.081399999999999e-98 2586905000.0 239568.4 243553.7 277640.8 264307.6 301741.8 281756.2 281142.5 284375.8 316037.9 277635.6 296731.6 True False 263889.2076070646 264078.82505078474 296483.17427775904 280633.2801658878 280548.49692069873 279461.6709231705 291841.53168457904 278703.7015805001 302755.92611440225 260105.64083441225 260235.49433659253 1.0140400266296739 1.0147686645282183 1.1392879938748217 1.0783820280984133 1.0780562337812114 1.0738799164794584 1.121451677560582 1.0709672878827994 1.1633921302173067 0.9995010154071745 1.0 17.98945822362183 -5.7196469256223965 22.56935357132798 1.0841645012135641 1.0144034978367937 0.21765231345546632 0.04796634572178174 70.99098136951295 38334.69534420986 0.007933368490066038 0.030724422218215867 1.9070104565266118e-06 5.7196469256223965 -0.06976100337677038 WDKDDFES(ph)EEEDVK ddPTM_A549_MK2206_60min_R1 4 WDKDDFESEEEDVK 14 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK 179.87 4.138e-24 120672100.0 21251.800000000003 34232.0 36099.0 35261.1 61442.299999999996 53480.5 44829.200000000004 45482.1 60595.799999999996 48007.5 48656.1 True False 24838.5842833747 35974.26258330618 41218.38101659487 43900.07108293093 52404.219062122625 59139.77101251724 52974.0853614362 51929.32695808954 46870.94805160866 37162.57240734321 36573.44752995491 0.6791425463249273 0.9836169410565418 1.1270028887168921 1.2003263035833651 1.4328487632783804 1.617013844923417 1.4484301847138858 1.4198641491359993 1.2815567362967286 1.0161079941098192 1.0 15.158509005680244 -5.402318500297993 1.4660907657836526 1.2368580543684624 0.5516319388846462 0.4992463224060312 0.1837986638164946 0.7580110163892516 1.78291069055418 0.03239802334321413 0.6953720020604371 3.959875207737217e-06 5.402318500297993 -0.6852261154838162 WDKDDFES(ph)EEEDVK ddPTM_A549_PD325901_60min_R1 4 WDKDDFESEEEDVK 14 1 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK 208.62 1.0027999999999999e-38 230547000.0 55318.5 62606.6 69320.5 75987.7 87368.5 88309.3 81272.7 77127.8 109739.9 85504.6 90526.0 True False 60934.39339667266 67882.6778998819 74025.00598802994 80681.28764841212 81232.03796496235 87590.1383396552 84365.57707262808 75589.42552341153 105127.91363378214 80105.82496369367 79391.87589159481 0.7675142161885076 0.8550330513990112 0.9324002633355958 1.0162411045505202 1.0231782163187602 1.1032632414336028 1.0626474828208439 0.9521052963482647 1.324164625828069 1.0089927220396417 1.0 16.27670376461834 -5.804900572582078 0.5590229166939183 1.136953717546926 0.6507031564113414 0.4765954566629056 0.09810983273778671 1.5055950956830175 0.4485219537452436 0.02391794441397911 0.42016329778249717 1.5671098033023225e-06 5.804900572582078 -0.4862505611355846 WDKDDFES(ph)EEEDVKSTQPISSVGK ddPTM_A549_PD325901_60min_R1 1 WDKDDFESEEEDVKSTQPISSVGK 24 2 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(0.999)EEEDVKSTQPISSVGK 133.91 2.0466999999999998e-23 5195400.0 1551.4 2201.4 2029.7 2215.9 2588.2 2389.9 2163.6 2571.7 3155.8 2089.6 2026.8 True False 1708.8969859196832 2386.9197038139732 2167.4476475776173 2352.771110325964 2406.4137608052733 2370.4374467688185 2245.9369819673475 2520.405426040377 3023.172700590118 1957.6622993866324 1777.516448943777 0.9613958773406185 1.3428397274367343 1.2193685458525811 1.3236283195713945 1.353806746618404 1.3335670947953042 1.2635252873760532 1.4179364852224203 1.7007846551217716 1.1013469386175865 1.0 10.795647195111455 -4.73918170896944 1.5935282748915776 1.336002532391355 3.916594913171423e-12 0.22404951649623084 0.17328577178537363 7.260031562855275 5.401651420391577 0.034302965253268806 22.854267954755965 1.823132743315643e-05 4.73918170896944 -1.3360025323874383 WDKDDFES(ph)EEEDVKSTQPISSVGKPASVIK ddPTM_A549_MK2206_60min_R1 2 WDKDDFESEEEDVKSTQPISSVGKPASVIK 30 3 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(0.991)EEEDVKS(0.004)T(0.004)QPIS(0.001)SVGKPASVIK;WDKDDFES(1)EEEDVKSTQPISSVGKPASVIK 91.96700000000001 5.3273e-10 13476400.0 1872.6 2606.9 2633.7 2801.2 3727.5 2242.1000000000004 2306.6000000000004 2208.06 4344.200000000001 3867.4 4005.6 True False 2188.6490993255825 2739.5800750298217 3007.198262650097 3487.4941257506453 3179.189687789392 2479.3575338144724 2725.679362885992 2521.059266900147 3360.2456362618927 2993.7516539740477 3010.8989710640067 0.7269088469455176 0.9098877449420679 0.9987708958522107 1.1582899855713913 1.0558938437797911 0.8234608858158746 0.9052709470098154 0.83731114565071 1.1160273621118653 0.9943049178153263 1.0 11.555978584757138 -8.77305207204349 24.998438061768034 1.0547906959855942 0.9366318996341205 0.1441414593493734 0.1152003411256229 297.0814782421824 639520.0298116656 0.02134510145756162 0.022816020449047854 1.6863508192788402e-09 8.77305207204349 -0.11815879635147364 WDKDDFES(ph)EEEDVKSTQPISSVGKPASVIK ddPTM_A549_PD325901_60min_R1 1 WDKDDFESEEEDVKSTQPISSVGKPASVIK 30 3 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(1)EEEDVKSTQPISSVGKPASVIK 122.89 1.0184e-21 11433000.0 1529.1 1464.0 1988.0 2445.0 2406.4 3084.9 2451.3 2767.1 2961.6 2286.9 2336.8 True False 1684.3331063360752 1587.3764179084471 2122.917634815147 2596.022097002115 2237.382765629324 3059.777597195337 2544.58556290283 2711.9080197520425 2837.1342512414258 2142.5047437152043 2049.3884141956855 0.8218710980646965 0.7745610382653783 1.0358786163277491 1.2667301517955367 1.0917319284775109 1.493019857046569 1.2416316718085343 1.323276740010445 1.3843809360827792 1.0454361549399427 1.0 11.00097772441809 -5.95764578971195 2.9200130125103483 1.2197674249389967 0.7949500299156472 0.5896369583589149 0.13933998395059627 0.16291599938870766 2.794924182802586 0.023507708818722016 0.0853410464987495 1.1024380907360442e-06 5.95764578971195 -0.4248173950233495 WDLS(ph)PEQIK ddPTM_A549_MK2206_60min_R1 2 WDLSPEQIK 9 0 Q9BYT8 Q9BYT8 NLN Neurolysin, mitochondrial 1 WDLS(1)PEQIK;WDLS(1)PEQIK 60.518 0.0080494 704390.0 690.08 928.41 709.06 630.52 1335.4 1033.8 914.46 870.03 1402.0 946.93 1191.8 True False 806.5486331638357 975.6621034402694 809.6153700553133 784.997428305118 1138.964428993684 1143.1960298190993 1080.6055450380325 993.3594168551284 1084.4492385339472 733.0178553285532 895.8431679933303 0.9003234739965562 1.0890992288591448 0.9037467706192754 0.876266579186506 1.2713881957094566 1.276111791285783 1.2062441101812116 1.1088541525412672 1.2105346976782672 0.8182435068076677 1.0 9.80710237678702 -6.748917901867861 24.999998010183702 1.1340121085708805 0.9500824348242379 0.30433728526865467 0.13410889082533048 197.64826089000746 394615.9525697755 0.016696496840132826 0.03457004992957825 1.7827157364990422e-07 6.748917901867861 -0.1839296737466426 WDLS(ph)PEQIK ddPTM_A549_PD325901_60min_R1 2 WDLSPEQIK 9 0 Q9BYT8 Q9BYT8 NLN Neurolysin, mitochondrial 1 WDLS(1)PEQIK;WDLS(1)PEQIK 93.258 0.00098166 2389340.0 2200.57 2244.4 2073.52 2760.5 2897.7 2392.5 2449.09 2447.3 2456.3 2277.1 2556.6000000000004 True False 2423.9702464259863 2433.543464722486 2214.2415362886827 2931.0098154496245 2694.1755485223107 2373.016273230848 2542.2914601434713 2398.4866816302892 2353.0702530133435 2133.323517387683 2242.1544076226846 1.0810897938987518 1.0853594455623277 0.9875508701634882 1.3072292458918209 1.2016012542949241 1.0583643415294106 1.1338610095274466 1.0697241338402563 1.049468424214486 0.9514614649798391 1.0 11.130669918488287 -8.780722958631072 0.930604037987463 1.0140809941094704 1.1257953075676943 0.30737403434706645 0.08019404502226157 0.5080590999144085 0.8876713897248387 0.018578997892249226 0.019198614495297243 1.6568265348464611e-09 8.780722958631072 0.11171431345822391 WDQTADQT(ph)PGAT(ph)PK ddPTM_A549_PD325901_60min_R1 2 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 WDQT(0.003)ADQT(0.999)PGAT(0.999)PK;WDQT(0.001)ADQT(0.999)PGAT(1)PK 108.89 5.3996e-05 18589800.0 5883.4 6008.200000000001 6061.3 6325.2 7690.1 7293.0 6003.5 6944.5 6739.1 7747.799999999999 7761.7 True False 6480.678436869836 6514.532099779739 6472.656267557871 6715.893238428536 7149.973905404776 7233.60822598644 6231.966477741251 6805.986499645138 6455.879062851526 7258.602585752184 6807.0601054701565 0.9520524773480347 0.9570257936380874 0.9508739701529065 0.9866070130674536 1.0503761968634673 1.062662605281465 0.9155151241772113 0.9998422805427918 0.948409293119592 1.0663344341442156 1.0 12.732816133262435 -6.26256533042318 23.214447623191305 0.9847280924192569 0.9536882496795981 0.10103738628111503 0.04635778117477057 70.90357351623123 1461935.064449234 0.0059348281497688445 0.014568503415401876 5.463043637585751e-07 6.26256533042318 -0.031039842739658763 WDQTADQTPGAT(ph)PK ddPTM_A549_MK2206_60min_R1 2 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQTPGAT(1)PK;WDQTADQT(0.028)PGAT(0.972)PK 218.57 7.987899999999999e-39 116091000.0 11551.3 17316.2 17673.6 16337.6 25769.7 21512.7 20263.9 20295.9 29383.6 21514.2 23006.3 True False 13500.877037829552 18197.520616529764 20179.982235931493 20340.312733422736 21979.011266915168 23789.159635025455 23945.588329829814 23172.905978586954 22728.261515967253 16654.12727773918 17293.200768421662 0.780704348409746 1.0522933758890627 1.1669315880945101 1.1762028907086575 1.2709625916707135 1.3756365842039937 1.3846822604150746 1.340000980090508 1.3142888826844774 0.9630448117014019 1.0 14.077917299157669 -5.209792442272646 1.4548698466557086 1.2081761294033173 0.5702495734022537 0.49076516156712413 0.1335532215165008 1.0516842831153292 1.8069206747319375 0.022480250253662473 1.0020898160967024 6.168897549594909e-06 5.209792442272646 -0.6379265560010636 WDQTADQTPGAT(ph)PK ddPTM_A549_PD325901_60min_R1 3 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQT(0.003)PGAT(0.997)PK;WDQTADQT(0.034)PGAT(0.966)PK;WDQTADQT(0.018)PGAT(0.982)PK 209.31 3.6018e-38 174993100.0 19679.800000000003 20274.4 24325.0 24586.0 27861.3 24908.8 25833.3 25110.3 25234.0 23899.2 25371.4 True False 21677.678808496956 21982.994841012995 25975.840778107846 26104.621381142726 25904.418404267042 24705.95099128631 26816.400368024184 24609.455367850715 24173.502733598776 22390.200433337 22250.878642555814 0.9742392269866329 0.9879607540067887 1.1674074177200298 1.1731950814390069 1.164197550146342 1.1103359731617546 1.2051838850415824 1.1059992624643602 1.086406659347189 1.0062614062581208 1.0 14.441574685886009 -9.955611319611624 0.8325767578376128 1.0082791633397157 1.113790525287543 0.25086722213914825 0.0696763306569861 0.5969875611173643 0.8432751354081165 0.03117552882407953 0.015140897795955378 1.107614622017311e-10 9.955611319611624 0.1055113619478274 WDQTADQTPGAT(ph)PKK ddPTM_A549_MK2206_60min_R1 2 WDQTADQTPGATPKK 15 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQT(0.004)PGAT(0.996)PKK;WDQTADQT(0.002)PGAT(0.998)PKK 128.38 1.9924e-09 23196000.0 4535.9 6237.7 6599.1 6303.1 9104.9 7555.799999999999 7240.2 7366.299999999999 9859.2 8725.900000000001 8447.7 True False 5301.449027892189 6555.172286629145 7534.951609923026 7847.359782956913 7765.581271188094 8355.349740865884 8555.650621333201 8410.49558334762 7626.106941907198 6754.713129599254 6349.902945340875 0.8348866232328843 1.032326374600557 1.1866246893508283 1.2358235788020617 1.222944876171052 1.3158232201007842 1.347367147967317 1.324507737479463 1.2009800791526608 1.0637506096932396 1.0 12.632518825941304 -5.408745010853266 2.485472598395161 1.1659415992427533 0.8110413924509012 0.4941498048564069 0.10837622580382456 0.34871625471348683 3.2500355193344133 0.019708916545743544 0.22507745365254037 3.901710021809523e-06 5.408745010853266 -0.3549002067918521 WDQTADQTPGAT(ph)PKK ddPTM_A549_PD325901_60min_R1 2 WDQTADQTPGATPKK 15 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQT(0.005)PGAT(0.995)PKK;WDQTADQT(0.005)PGAT(0.995)PKK 117.37 5.2698e-07 44683000.0 8453.2 8640.9 9620.9 9864.1 11572.8 11211.8 11710.3 11175.6 13388.6 9515.9 10852.5 True False 9311.362641083066 9369.098968241187 10273.83212917154 10473.383054003492 10759.966451992606 11120.494818060442 12155.941874622036 10952.693890911398 12825.923702110662 8915.064450006344 9517.711299665645 0.9783195085366975 0.9843857071573837 1.0794435558822275 1.1004098279773857 1.130520364950616 1.1684000982937046 1.2771916999677297 1.1507697119680613 1.3475848655507374 0.9366815371169672 1.0 13.216398978616517 -6.123943706382864 1.0463721878292014 1.1751130249737978 0.9613161661092098 0.21303088129112224 0.10894099658079913 0.7451041652558558 1.2931226722635347 0.019288924653345075 0.12543612763047232 7.517203263263261e-07 6.123943706382864 -0.213796858864588 WDS(ph)YENLSADGEVLHTQGPVDGSLY(ph)AK ddPTM_A549_PD325901_60min_R1 2 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;E9PCX8;C9JHU5;Q68CZ2-3 Q68CZ2 TNS3 Tensin-3 2 WDS(1)YENLSADGEVLHTQGPVDGS(0.002)LY(0.998)AK;WDS(0.973)YENLS(0.027)ADGEVLHTQGPVDGSLY(1)AK 190.23 2.1485999999999997e-57 25038000.0 3318.5 3113.1000000000004 4627.1 3864.4 4602.9 4225.6 4084.8 3930.4 4109.6 3618.0 3127.5 True False 3655.3916770494175 3375.4518624253997 4941.122831012659 4103.095211310827 4279.608183142955 4191.188114593214 4240.249299288325 3852.0050886608474 3936.887803518966 3389.5588625482555 2742.8373268559612 1.3327045104929691 1.2306423823882355 1.8014640469679373 1.4959309366020959 1.5602850891811917 1.5280483729589087 1.5459353924386052 1.4043870013524624 1.4353340480573493 1.2357855966739426 1.0 11.421453345529457 -10.421621082387873 0.5637642761081924 0.9542345365725518 1.502641547565566 0.4392831730073463 0.1518849417794638 0.519873633436442 0.2690830140501681 0.14254267036010548 0.03194816294401333 3.787729161894282e-11 10.421621082387873 0.5484070109930141 WDS(ph)YENLSADGEVLHTQGPVDGSLYAK ddPTM_A549_MK2206_60min_R1 4 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;E9PCX8;C9JHU5;Q68CZ2-3 Q68CZ2 TNS3 Tensin-3 1 WDS(1)YENLSADGEVLHTQGPVDGSLYAK;WDS(0.995)YENLS(0.005)ADGEVLHTQGPVDGSLYAK;WDS(1)YENLSADGEVLHTQGPVDGSLYAK;WDS(0.993)Y(0.002)ENLS(0.005)ADGEVLHTQGPVDGSLYAK 194.26 3.5877999999999997e-60 80163000.0 3954.43 4281.33 4613.08 4146.29 6841.2 5842.85 5318.47 6679.82 8228.9 6841.8 7457.000000000001 True False 4621.841107468798 4499.231409961039 5267.284110364092 5162.131236134029 5834.868542482843 6461.13650883007 6284.767155609237 7626.704941090798 6365.067288853064 5296.232628163534 5605.221097269892 0.8245599999114996 0.8026858052312081 0.9397103198890053 0.9209505114166368 1.0409702741832616 1.1526996699518355 1.1212344788094672 1.3606430163487218 1.1355604316756152 0.9448748829449644 1.0 12.452555565746984 -6.5263269272691184 1.3721646893890642 1.1005477963598411 0.8288355433643159 0.5629878041665284 0.10267594039130133 0.2748459964032154 0.9989291450354136 0.016507864655695155 0.05378902869158439 2.976275111929228e-07 6.5263269272691184 -0.27171225299552526 WDS(ph)YENLSADGEVLHTQGPVDGSLYAK ddPTM_A549_PD325901_60min_R1 3 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;E9PCX8;C9JHU5;Q68CZ2-3 Q68CZ2 TNS3 Tensin-3 1 WDS(0.689)Y(0.04)ENLS(0.27)ADGEVLHTQGPVDGSLYAK;WDS(1)YENLSADGEVLHTQGPVDGSLYAK;WDS(0.727)YENLS(0.273)ADGEVLHTQGPVDGSLYAK 407.89 0.0 296931000.0 34232.43 37667.1 38831.3 39116.1 51485.9 39313.520000000004 39905.82 39116.2 49868.5 47512.1 48187.5 True False 37707.68109301699 40841.43870969893 41466.62552957616 41532.212657891345 47869.70800071254 38993.36372747602 41424.457817402596 38335.99670493475 47772.700367380115 44512.17789753427 42260.74298573035 0.892262616058342 0.9664155389669637 0.9812090985616999 0.9827610620077125 1.1327228207245694 0.9226852386538119 0.9802112999146718 0.9071302110774336 1.130427365735404 1.0532748539836163 1.0 15.367030511053397 -8.761213518380618 24.999999990035217 1.0615906975102358 0.9754066276861945 0.26998718766347085 0.0659857325861216 6.734430926968461 745406.2957453445 0.012628202642287348 0.013881586454871477 1.7329517925129127e-09 8.761213518380618 -0.08618406982404136 WDT(ph)GENPIYK ddPTM_A549_MK2206_60min_R1 2 WDTGENPIYK 10 0 P05556 P05556 ITGB1 Integrin beta-1 1 WDT(1)GENPIYK;WDT(1)GENPIYK 111.63 0.00016472 8282300.0 4687.799999999999 5239.799999999999 5229.0 4713.799999999999 7388.8 6596.2 5729.200000000001 6239.799999999999 9159.5 7835.5 8996.6 True False 5478.986034293746 5506.483439004666 5970.550827883724 5868.681211610522 6301.917307884171 7294.205505796811 6770.1214800339985 7124.310758586062 7084.887874715898 6065.4551080089095 6762.49592647155 0.8102017500441591 0.8142679121549977 0.8828915969490222 0.8678276889805994 0.9318922150053415 1.078626232844578 1.0011276241265594 1.0535031497317728 1.0476735145942722 0.896925510042217 1.0 12.723340104564784 -6.909426673073668 2.2007068050812113 1.0274191633186596 0.8387736965141646 0.7146873196239849 0.04934961835460373 0.07344330835005443 0.7200078804980182 0.004765758124356372 0.010021108249719477 1.2318939629874046e-07 6.909426673073668 -0.188645466804495 WEADTLDKEGLSES(ph)VR ddPTM_A549_MK2206_60min_R1 2 WEADTLDKEGLSESVR 16 1 Q6PHR2-3;Q6PHR2;Q6PHR2-4 Q6PHR2-3 ULK3 Serine/threonine-protein kinase ULK3 1 WEADTLDKEGLS(0.256)ES(0.744)VR;WEADTLDKEGLS(0.031)ES(0.969)VR 119.01 3.3936e-08 14404400.0 4343.1 5629.700000000001 4843.9 4857.3 8322.0 5995.5 6247.7 5221.6 9362.5 7934.9 7607.6 True False 5076.109101399626 5916.227683607117 5530.837857178424 6047.338718052486 7097.844824086739 6629.939830509198 7382.82621846129 5961.777790479341 7241.908698840283 6142.400578972611 5718.422960921341 0.8876763989108237 1.0345907821155478 0.967196357278075 1.0575186129775456 1.241224175370048 1.1594000436513698 1.2910598374611633 1.0425562836504125 1.2664171133073168 1.0741424027128905 1.0 12.481401616952962 -6.497127765664034 4.519202850284489 1.1444205495439956 0.9738593354854502 0.4486131046249494 0.09228025186713829 0.19182266373534873 9.467293481078222 0.01602055907968788 0.03688918145370017 3.1832608962553713e-07 6.497127765664034 -0.1705612140585454 WEADTLDKEGLSES(ph)VR ddPTM_A549_PD325901_60min_R1 2 WEADTLDKEGLSESVR 16 1 Q6PHR2-3;Q6PHR2;Q6PHR2-4 Q6PHR2-3 ULK3 Serine/threonine-protein kinase ULK3 1 WEADTLDKEGLS(0.208)ES(0.792)VR;WEADTLDKEGLS(0.025)ES(0.975)VR 96.79 1.269e-06 20988400.0 5715.9 5467.8 5815.6 5242.0 6842.6 6575.4 6327.4 6935.700000000001 6962.200000000001 6880.799999999999 7123.5 True False 6296.173960176816 5928.590695245766 6210.281588043741 5565.786434554224 6361.999381688498 6521.85212246692 6568.192669486134 6797.362022548606 6669.6029457026825 6446.345113715322 6247.354659587034 1.0078143955721908 0.9489761696413216 0.9940657968750979 0.8909029081633948 1.0183509226462009 1.0439381910963945 1.0513558181632525 1.0880384407370798 1.0675883328422338 1.03185195414237 1.0 12.609029718055769 -6.982532440205271 24.918925554862785 1.039365417015877 0.9610983262785209 0.5713955054235449 0.03474576891611524 157.52686563501828 224723.89534430802 0.005605629137287146 0.010592265093679777 1.0410403428228147e-07 6.982532440205271 -0.07826709073735616 WEETRTPESQPDT(ph)PPGTPLVSQDEK ddPTM_A549_PD325901_60min_R1 1 WEETRTPESQPDTPPGTPLVSQDEK 25 1 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 A0A0D9SEV0 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 WEETRTPES(0.003)QPDT(0.994)PPGT(0.003)PLVSQDEK 88.66799999999999 1.1327000000000001e-08 6076800.0 1608.9 1721.0 2020.4 1940.4 2508.0 2641.2 2054.0 2436.0 2555.5 2080.9 2901.8 True False 1772.2343435904193 1866.0347098500263 2157.5164936521733 2060.2541010318623 2331.8467321302955 2619.690942887068 2132.166093991927 2387.412068994969 2448.1012219906356 1949.511618871385 2544.8969960257814 0.6963874555072427 0.7332456727184262 0.8477814611048864 0.8095628641352645 0.9162833449730209 1.0293897737229005 0.8378201936351874 0.9381173669202536 0.9619647576360434 0.7660473574827683 1.0 11.313391549477755 -3.788428493482532 0.2942034644018865 0.992294661568392 1.1755403226028585e-19 0.3695207284933679 0.08371568186915705 5.3441123315340855 0.1675004557021491 0.0176242789342737 2.2722175699000253 0.0001627689292363935 3.788428493482532 -0.992294661568392 WES(ph)QQDVSQTTVSR ddPTM_A549_MK2206_60min_R1 2 WESQQDVSQTTVSR 14 0 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 WES(1)QQDVSQTTVSR;WES(1)QQDVSQTTVSR 154.46 6.781300000000001e-19 11313000.0 4076.2 4149.6 4811.9 4567.9 6580.799999999999 5300.700000000001 5582.4 5547.1 8177.0 6644.7 6874.1 True False 4764.162906478126 4360.796915625362 5494.299775998026 5687.035705060823 5612.773037533043 5861.616555680112 6596.649820243981 6333.418412281285 6324.922555985793 5143.657655055425 5167.071254491483 0.9220238451979682 0.8439591212981113 1.0633295933788602 1.100630400658276 1.0862581065926142 1.1344175969288006 1.2766709602678374 1.225726935113572 1.224082704585861 0.9954686904277339 1.0 12.335131063488282 -5.897206169026513 3.560454067227003 1.1282031934599321 0.882486603390213 0.5444548524855882 0.08600034854920574 0.15246538397696013 3.71152754915949 0.014273562655825916 0.05080725601246305 1.2670502267916077e-06 5.897206169026513 -0.24571659006971913 WFKDHYQDPVPGIT(ph)PSSSSR ddPTM_A549_MK2206_60min_R1 2 WFKDHYQDPVPGITPSSSSR 20 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 WFKDHYQDPVPGIT(0.523)PS(0.096)S(0.118)S(0.118)S(0.145)R;WFKDHYQDPVPGIT(0.631)PS(0.08)S(0.096)S(0.096)S(0.096)R 69.152 0.00061034 5443100.0 1421.05 1859.22 2161.71 2166.2 2932.4 2198.3 1417.8400000000001 2007.3400000000001 2787.8 2569.3 2641.7 True False 1660.8884986631535 1953.8463566293094 2468.272983389659 2696.919097244414 2501.0478445267913 2430.922646886559 1675.4431751817724 2291.8865922209275 2156.36775120181 1988.8933455436536 1985.6929827890422 0.8364276416640812 0.9839619586533453 1.2430285068151876 1.358175267083034 1.2595340096402505 1.2242187830427649 0.8437574135093621 1.154199874847629 1.085952244325829 1.0016117107641265 1.0 10.955426862992697 WFKDHYQDPVPGIT(ph)PSSSSR ddPTM_A549_PD325901_60min_R1 2 WFKDHYQDPVPGITPSSSSR 20 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 WFKDHYQDPVPGIT(0.937)PS(0.035)S(0.008)S(0.01)S(0.01)R;WFKDHYQDPVPGIT(0.866)PS(0.026)S(0.032)S(0.038)S(0.038)R 84.318 4.6393999999999997e-05 10307500.0 2224.3999999999996 2078.44 2530.6 2540.4 2818.6 3485.8 3016.5 3165.4 3633.2 2819.2 2370.8999999999996 True False 2450.219450483267 2253.597433085815 2702.341733734009 2697.3147383329933 2620.631259642125 3457.412800513307 3131.2945581921363 3102.263613791737 3480.509238793335 2641.195230872317 2079.294330373397 1.1783899059847192 1.083828008457618 1.2996436792326203 1.2972260343001143 1.2603464653181233 1.662781814969134 1.5059409879840449 1.4919790663953942 1.6738896403224983 1.2702363452306509 1.0 11.021878275140674 -6.067864987033404 1.470772155813401 1.374048456009803 1.1252022457288355 0.2213675199904901 0.1859133131606424 0.8549133362760993 3.300928808057966 0.03941446398438004 0.19751621827910074 8.553325763596616e-07 6.067864987033404 -0.24884621028096743 WFSNPS(ph)R ddPTM_A549_MK2206_60min_R1 1 WFSNPSR 7 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 WFSNPS(1)R 52.591 0.046954 10029000.0 1069.4 1276.1 1548.8 1678.7 2804.8 2087.4 2228.2 2391.6 3915.9 2634.1 2585.7 True False 1249.8885756802197 1341.0480393362066 1768.4431291310607 2089.9815753597077 2392.217635496092 2308.2872824960227 2633.035097712029 2730.616623967823 3028.954902407334 2039.0549805380972 1943.5993283104142 0.6430793412378658 0.6899817363602353 0.9098805002512436 1.0753150327421366 1.230818307380084 1.1876353571816856 1.3547211399794763 1.404927746266289 1.5584255758312222 1.0491128242520351 1.0 10.924515123648218 -6.140469477441437 1.072358323585407 1.2853835323063398 0.5962692449659912 0.7059552688896062 0.14796683493818724 0.3567525395068405 0.6625791607290248 0.031382061671598446 0.19442709507890224 7.23653259414652e-07 6.140469477441437 -0.6891142873403486 WFSNPS(ph)R ddPTM_A549_PD325901_60min_R1 1 WFSNPSR 7 0 B1AKL4;Q9NRA8;Q9NRA8-3;Q9NRA8-2 B1AKL4 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 WFSNPS(1)R 59.931000000000004 0.029164999999999996 14517000.0 2859.4 2864.1 3773.1 3336.9 3749.6 4258.0 3711.6 3499.5 4389.9 3903.6 3302.0 True False 3149.684183020975 3105.4677585598256 4029.1652554934717 3543.0127343502486 3486.2410314177623 4223.324259735403 3852.84696906545 3429.699727195357 4205.407769288468 3657.126029807457 2895.8749331026006 1.0876451006281707 1.0723763388609708 1.391346431931948 1.2234688362574808 1.2038645010413662 1.458393182474421 1.3304604163058806 1.1843397268268157 1.4522062818447938 1.2628743002686453 1.0 11.499783581389533 -4.134708008811053 12.503325493547436 1.2332365699748447 0.5677313543941118 0.0 0.14733821650315268 0.0 0.0 0.024040088749862236 0.0 7.333174020660236e-05 4.134708008811053 -0.6655052155807328 WGEAS(ph)NDEDDPKDK ddPTM_A549_MK2206_60min_R1 2 WGEASNDEDDPKDK 14 1 Q5SXM2;A0A1B0GUB4 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 WGEAS(1)NDEDDPKDK;WGEAS(1)NDEDDPKDK 97.32 1.2809999999999998e-09 9984600.0 4286.4 4645.9 4878.3 4530.4 6258.9 5519.3 4325.4 5284.7 6697.8 5681.5 6199.0 True False 5009.839527581536 4882.356465756666 5570.116294447346 5640.348203377384 5338.224101114694 6103.348662585172 5111.2691911155225 6033.822408714987 5180.758994188778 4398.045204026879 4659.617216303619 1.0751611763413778 1.0478020487763888 1.1954021190749244 1.2104745822558702 1.1456357578980276 1.3098390660138466 1.0969289866196756 1.2949180433970278 1.1118421865344918 0.9438640557508629 1.0 12.185995728206253 -9.709915199660083 1.0317726974197652 1.019138320003524 1.1698811782238214 0.42443960809461034 0.08350604256571308 0.3439431628610698 0.7560061886793074 0.024434915255411947 0.015824969959806676 1.9502253635845764e-10 9.709915199660083 0.15074285822029743 WGEAS(ph)NDEDDPKDK ddPTM_A549_PD325901_60min_R1 1 WGEASNDEDDPKDK 14 1 Q5SXM2;A0A1B0GUB4 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 WGEAS(1)NDEDDPKDK 67.43 0.0010466 14069000.0 4925.5 5086.1 5690.6 5755.3 6140.5 5076.1 5272.5 5059.3 6927.5 5337.1 6030.9 True False 5425.533134038545 5514.7234966695005 6076.798336357681 6110.791809765342 5709.212463574992 5034.7619245755905 5473.147872722706 4958.388292555934 6636.36126603018 5000.114595164814 5289.1375330249775 1.0257878718717226 1.04265080312924 1.1489204616848416 1.1553474969425577 1.0794221984070367 0.951906032531564 1.0347902353736846 0.9374663187705234 1.2547152015982261 0.9453553748497697 1.0 12.368816774814139 -8.750776616112523 24.999741717706225 1.1202821873429092 1.0513970765159855 0.0 0.09914552265519312 442.1327607251428 1036617.3308168976 0.018771081486410622 0.021178333866693887 1.7751022884536786e-09 8.750776616112523 -0.06888511082692372 WGLGLDDEGSSQGEPQS(ph)KSPQESR ddPTM_A549_MK2206_60min_R1 1 WGLGLDDEGSSQGEPQSKSPQESR 24 1 Q92793;Q92793-2 Q92793 CREBBP CREB-binding protein 1 WGLGLDDEGSSQGEPQS(0.561)KS(0.437)PQES(0.002)R 96.338 3.0327000000000004e-08 4496700.0 1266.6 1312.8 1160.6 1128.9 1958.3 1326.8 1069.5 1052.7 2107.5 1333.7 1800.4 True False 1480.3711146031092 1379.615912577832 1325.1905318114077 1405.4805506782461 1670.2366641443239 1467.2010953414397 1263.8143061677665 1201.923448758541 1630.1546149859437 1032.416243705122 1353.3109914878262 1.09388834045868 1.0194374546984846 0.9792209921789647 1.0385495717677315 1.2341853976284272 1.0841566384740606 0.9338683525937617 0.8881354369531499 1.2045676309728013 0.7628817398210049 1.0 10.402277694058935 -8.790257120482368 24.999395722319306 1.0966013246049118 1.0367912942676416 0.0 0.13919758398742618 517.2811265937188 448739.0147501911 0.01987229137867086 0.02115747815431853 1.6208502021832358e-09 8.790257120482368 -0.05981003033727017 WGLGLDDEGSSQGEPQSKS(ph)PQESR ddPTM_A549_MK2206_60min_R1 1 WGLGLDDEGSSQGEPQSKSPQESR 24 1 Q92793;Q92793-2 Q92793 CREBBP CREB-binding protein 1 WGLGLDDEGSS(0.001)QGEPQS(0.167)KS(0.832)PQESR 117.73 2.2574999999999997e-16 5666300.0 1417.8 2092.6 1758.0 1164.1 2365.3 1767.4 1464.0 1512.2 2333.7 2041.7 2336.5 True False 1657.0899781180237 2199.1044017827335 2007.3108348478847 1449.3045522584348 2017.367503293964 1954.425094894831 1729.9898496770543 1726.5589809182743 1805.1206761531178 1580.478551977766 1756.282565880529 0.9435212820023786 1.252135871815246 1.142931595316213 0.8252114895485579 1.1486577060465994 1.1128192768428247 0.9850293359882596 0.9830758526334556 1.0278076610343754 0.8998999265163109 1.0 10.778309261425544 -6.759846525329832 0.5004361233399158 1.0088461451619923 1.1049857886352044 0.08135901567517367 0.11359067486290099 3.0181745502462825 1.1435465381637588 0.024118219532758285 0.13243708822849432 1.738415056080181e-07 6.759846525329832 0.09613964347321202 WGLGLDDEGSSQGEPQSKS(ph)PQESR ddPTM_A549_PD325901_60min_R1 2 WGLGLDDEGSSQGEPQSKSPQESR 24 1 Q92793;Q92793-2 Q92793 CREBBP CREB-binding protein 1 WGLGLDDEGSSQGEPQS(0.249)KS(0.751)PQESR;WGLGLDDEGSSQGEPQS(0.206)KS(0.794)PQESR 191.51 2.441e-51 22516000.0 8180.900000000001 8390.4 9491.7 8338.599999999999 10160.2 11133.0 9812.4 9365.599999999999 10222.1 10799.7 10704.3 True False 9011.418945539725 9097.488454111357 10135.863840228836 8853.656383665364 9446.582602787164 11042.336539134389 10185.816251551309 9178.795760828933 9792.500685310291 10117.805098911675 9387.738960148445 0.9599136686473471 0.9690819581510287 1.0796917003397974 0.9431084972909562 1.006268137928474 1.176250914731419 1.0850127272169319 0.9777429687588791 1.0431159970340127 1.0777680485005396 1.0 13.196562010829174 -5.630840226358703 8.962348336902926 1.0294538712546466 0.9622914991186176 0.1704119568388569 0.06121838547824274 0.35207577095805415 26.31263924593688 0.008201793019681236 0.03191782140124308 2.3396978374094594e-06 5.630840226358703 -0.06716237213602905 WGPRPGS(ph)SR ddPTM_A549_PD325901_60min_R1 1 WGPRPGSSR 9 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 WGPRPGS(0.982)S(0.018)R 48.74100000000001 0.008836 6818400.0 930.35 1212.3 1165.0 1121.1 1189.2 1024.7 1237.9 1263.2 1446.7 1251.1 1123.6 True False 1024.7984471125285 1314.4647755672197 1244.0639057141077 1190.3478007971662 1105.6746945172833 1016.3551829382026 1285.008961904872 1238.0044850387699 1385.9002300347693 1172.105332485938 985.4043230872444 1.0399776245164658 1.3339344518492045 1.262490813736731 1.2079790730649929 1.122051800070488 1.0314092998435302 1.3040423426182814 1.2563416417335538 1.4064279987049197 1.1894663997553458 1.0 9.94457199071531 -11.110593163801475 1.4778950246909837 1.0008830703396887 1.2432035800685939 0.03179791493425377 0.1253602397382359 0.376305016108157 1.4788241600789014 0.08823714380445045 0.019460420587518297 7.751876341464126e-12 11.110593163801475 0.24232050972890518 WGQPPS(ph)PTPVPRPPDADPNT(ph)PSPKPLEGRPER ddPTM_A549_MK2206_60min_R1 2 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.956)PT(0.044)PVPRPPDADPNT(0.818)PS(0.182)PKPLEGRPER;WGQPPS(0.935)PT(0.069)PVPRPPDADPNT(0.534)PS(0.462)PKPLEGRPER 72.553 3.5127e-05 25791000.0 1926.2600000000002 2282.99 2651.86 2355.4 3283.8999999999996 2316.39 2670.9 2597.2 3647.3 2976.4 3078.5 True False 2251.365595464542 2399.1844395612943 3027.933623719972 2932.473105737922 2800.842660156027 2561.508852304762 3156.167957310413 2965.3610535914167 2821.1923735412743 2304.0291728004227 2314.0234877223243 0.9729225340234312 1.0368021121180553 1.3085146455018672 1.2672615992434602 1.210377800837655 1.106950238792103 1.3639308218159034 1.2814740512898593 1.2191718833062288 0.9956809794823047 1.0 11.176187792775833 -10.618676506594465 0.9586564066671401 1.003160369795933 1.201349982282857 0.3134612093331227 0.11215298977822286 0.5549234836438764 0.9304433551225582 0.07233564857038002 0.020931175751645645 2.4061544075298757e-11 10.618676506594465 0.19818961248692402 WGQPPS(ph)PTPVPRPPDADPNT(ph)PSPKPLEGRPER ddPTM_A549_PD325901_60min_R1 2 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.955)PT(0.046)PVPRPPDADPNT(0.585)PS(0.415)PKPLEGRPER;WGQPPS(0.967)PT(0.033)PVPRPPDADPNT(0.706)PS(0.294)PKPLEGRPER 117.29 1.5267000000000001e-21 82375000.0 3427.7000000000003 3501.3999999999996 3797.2 3956.1 4195.9 5487.4 4449.9 4143.1 4555.200000000001 4564.3 4899.5 True False 3775.6775806606256 3796.475266164366 4054.9008264185472 4200.459312045016 3901.194459069181 5442.71243374167 4619.243379578714 4060.4626203009284 4363.760785134703 4276.109319051687 4296.892560489456 0.8786995549710792 0.8835397238165789 0.943682153867179 0.9775574448076368 0.9079106363843547 1.2666624443413346 1.075019520397908 0.9449765296990355 1.0155619959549629 0.9951631926688431 1.0 12.069077989075106 -6.269858803775738 1.359946598226407 1.021789932910185 0.8805214963422591 0.31268917907435356 0.08635140493527017 0.47681185416136324 1.6067838972917614 0.012940176223980701 0.05451587102980564 5.372064225576155e-07 6.269858803775738 -0.14126843656792587 WGQPPS(ph)PTPVPRPPDADPNTPS(ph)PKPLEGRPER ddPTM_A549_PD325901_60min_R1 1 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.987)PT(0.013)PVPRPPDADPNT(0.275)PS(0.725)PKPLEGRPER 171.37 6.787699999999999e-63 51858000.0 2784.0 2709.6 3273.2 3139.5 4004.8 4412.0 3493.2 3807.7 3567.6 3626.9 3803.1 True False 3066.629630527523 2937.9475013420283 3495.3390353505697 3333.4197846781726 3723.516663809971 4376.0701347939375 3626.1356375523856 3731.752436417138 3417.666178663192 3397.8969150293738 3335.34280983722 0.9194346144818585 0.8808532342393355 1.0479699493081966 0.9994234400274011 1.1163819961258181 1.3120300923452932 1.0871852892774634 1.1188512393421006 1.0246821311989784 1.0187549252831396 1.0 11.70361933531784 -5.76715620063963 23.571458758695503 1.052061292575836 0.9001438851074356 0.3495483178999169 0.08817162134397961 61.374842882145224 253071.46504199266 0.013663757029034098 0.044338421423273426 1.7094003925697438e-06 5.76715620063963 -0.15191740746840032 WGQPPS(ph)PTPVPRPPDADPNTPSPK ddPTM_A549_MK2206_60min_R1 2 WGQPPSPTPVPRPPDADPNTPSPK 24 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.556)PT(0.444)PVPRPPDADPNTPSPK;WGQPPS(0.88)PT(0.117)PVPRPPDADPNT(0.002)PSPK 99.87100000000001 2.8240999999999998e-09 24566000.0 2476.94 3352.3999999999996 3771.2 2764.6000000000004 3979.0 3353.8999999999996 3280.8 3685.9 5012.0 4414.7 4660.2 True False 2894.9869166311587 3523.0228407418704 4306.012867109406 3441.9271241076117 3393.6943709494276 3708.80747186136 3876.878892636938 4208.387612595332 3876.7900025193585 3417.4162038576924 3502.943725023089 0.82644402647721 1.005732069166669 1.2292555076890435 0.982581335669309 0.9688121298400415 1.0587687850557503 1.1067488366834624 1.201386017860619 1.1067234608497187 0.9755841007223623 1.0 11.774352096015807 -7.494382862105795 21.238608327469795 1.0698332694683899 1.0141811899358022 0.10269709540280347 0.10375664579576017 281.7508066227268 209993.58512658818 0.01595892305692318 0.02545523485335245 3.2034440109354444e-08 7.494382862105795 -0.05565207953258766 WGQPPS(ph)PTPVPRPPDADPNTPSPK ddPTM_A549_PD325901_60min_R1 2 WGQPPSPTPVPRPPDADPNTPSPK 24 1 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.894)PT(0.106)PVPRPPDADPNTPSPK;WGQPPS(0.889)PT(0.111)PVPRPPDADPNTPSPK 123.89 7.7576e-17 37752000.0 4228.200000000001 4139.8 4640.6 4529.5 5749.1 5547.0 4601.799999999999 5552.2 6006.7 5347.0 5245.4 True False 4657.443751363676 4488.675474629365 4955.539022194754 4809.27692775913 5345.30304931829 5501.827071101988 4776.92401720158 5441.457015383363 5754.259287861926 5009.38950747527 4600.249053330218 1.0124329568617711 0.9757461873460781 1.077232768214437 1.0454383821409825 1.1619594911820506 1.1959846102504164 1.0384055214887689 1.182861395611652 1.250858208143382 1.0889387616631032 1.0 12.16749625415303 -6.211482183026042 1.5073924152413527 1.1273134935487934 0.9960962826274584 0.3273212821858664 0.0711352710296539 0.528296296187342 2.208174656993027 0.014421308648109558 0.05956357194616246 6.144942408754985e-07 6.211482183026042 -0.13121721092133498 WGQPPS(ph)PTPVPRPPDADPNTPSPKPLEGRPER ddPTM_A549_MK2206_60min_R1 2 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.408)PT(0.408)PVPRPPDADPNT(0.146)PS(0.039)PKPLEGRPER;WGQPPS(0.859)PT(0.128)PVPRPPDADPNT(0.007)PS(0.007)PKPLEGRPER 65.05199999999999 0.00027646 58244000.0 1589.24 2257.4 1313.12 1861.52 2967.1 1942.46 2089.63 2151.71 3560.6 2559.6000000000004 2571.0 True False 1857.464858812447 2372.2920178650206 1499.3401612374596 2317.5924835668075 2530.643520493602 2148.0098278994083 2469.2887223911634 2456.7214818355105 2754.129785109823 1981.384582280595 1932.549744009776 0.9611472432054772 1.2275451254066245 0.7758352228111521 1.1992407909553315 1.3094842853787882 1.111490058435744 1.2777361773196727 1.2712332448106354 1.4251274998983368 1.025269641012962 1.0 10.916289834394401 -6.480978029968466 24.48779834823031 1.2172465330785724 1.008016879994753 0.2745235479643724 0.1530980707369697 454.4152433951514 265570.71045531664 0.024757162317307475 0.05752460591706492 3.3038625414998815e-07 6.480978029968466 -0.20922965308381936 WGQPPS(ph)PTPVPRPPDADPNTPSPKPLEGRPER ddPTM_A549_PD325901_60min_R1 3 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.74)PT(0.26)PVPRPPDADPNTPSPKPLEGRPER;WGQPPS(0.719)PT(0.092)PVPRPPDADPNT(0.149)PS(0.039)PKPLEGRPER;WGQPPS(0.832)PT(0.168)PVPRPPDADPNTPSPKPLEGRPER 188.2 8.354999999999998e-77 239486000.0 5783.2 5897.2 6521.6 6530.0 7133.3 6975.0 6294.799999999999 6605.2 7530.1 7149.099999999999 7924.6 True False 6370.3062066331795 6394.177740225202 6964.194993566631 6933.3432692939905 6632.2816165490585 6918.19791255388 6534.352058646731 6473.454104320842 7213.6360836281265 6697.704605926961 6949.924438178333 0.9166007865695474 0.9200355769481143 1.002053339646386 0.9976141943654443 0.9542954999792008 0.995434982652449 0.9402047629109866 0.9314423720580219 1.0379445341881899 0.9637089820911087 1.0 12.762781577137368 -8.766193181895517 24.99985233759444 1.0179182534623532 0.959422762806201 0.19774826327428174 0.034108374144894545 86.33386447765565 454021.1979829978 0.0056026592876854435 0.006060260540683975 1.7131950784094986e-09 8.766193181895517 -0.05849549065615223 WGQPPSPT(ph)PVPRPPDADPNT(ph)PSPKPLEGRPER ddPTM_A549_PD325901_60min_R1 1 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.398)PT(0.602)PVPRPPDADPNT(0.85)PS(0.15)PKPLEGRPER 87.226 5.1092e-09 33382000.0 1505.5 1907.2 1694.8 2013.1 2241.8 2233.6 1866.5 1779.9 2093.2 1644.2 2009.9 True False 1658.3372517094763 2067.9264373189812 1809.8193196603168 2137.444614918182 2084.343701790149 2215.410302147719 1937.5306788879916 1744.398498195463 2005.2300832990784 1540.384931399073 1762.6950418058505 0.9407964579117092 1.1731617711935165 1.0267342204617471 1.2126003444863651 1.1824755005010823 1.2568313007098888 1.0991865484020567 0.9896201310059606 1.1375933078275156 0.8738805606561276 1.0 10.783567184884356 -11.05880209503998 0.5540313251298342 0.9642146227087751 1.1227344741009726 0.28167737547498395 0.09929112001275173 2.329311663271687 0.8054109994433387 0.2031000794782702 0.01978547310425741 8.73369265991984e-12 11.05880209503998 0.15851985139219749 WGQPPSPT(ph)PVPRPPDADPNTPSPKPLEGRPER ddPTM_A549_MK2206_60min_R1 2 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y212;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y8C1;A0A2R8Y521;F5GWX5;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y445;A0A2R8YER1;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 Q14839-2 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.038)PT(0.962)PVPRPPDADPNTPSPKPLEGRPER;WGQPPS(0.119)PT(0.881)PVPRPPDADPNTPSPKPLEGRPER 168.33 7.023999999999998e-63 167489000.0 4283.0 4593.6 4498.7 4819.4 6366.5 4930.7 4456.5 3977.2000000000003 7528.0 5884.8 6461.1 True False 5005.865690703553 4827.394619148029 5136.683306444927 6000.153216351086 5429.996283651555 5452.463401266229 5266.18836412964 4540.980279664172 5822.920019745756 4555.4195928289 4856.630552711613 1.0307281223828355 0.9939802022726929 1.0576640019646857 1.2354559712187716 1.118058337919036 1.1226844088896042 1.0843296204998254 0.9350063239067663 1.198962934599716 0.9379794372634466 1.0 12.24574002837535 -5.998790160440127 23.779416036807817 1.096916124065519 1.015721070427913 0.047449616825260166 0.09167260145453966 37.574041001792665 738363.9557419533 0.012614967573499206 0.03873721187759688 1.0027896423664223e-06 5.998790160440127 -0.08119505363760604 WHPHS(ph)PNVRPSFQDDR ddPTM_A549_MK2206_60min_R1 1 WHPHSPNVRPSFQDDR 16 1 Q9H329-2 Q9H329-2 EPB41L4B Band 4.1-like protein 4B 1 WHPHS(0.987)PNVRPS(0.013)FQDDR 56.93600000000001 0.0040363 4560400.0 1250.4 1162.5 734.93 837.27 1554.4 1059.8 993.48 1095.5 1609.4 1561.0 1641.3 True False 1461.4369506550834 1221.6662845610379 839.1541250595873 1042.4011875864787 1325.7498191012296 1171.947332561695 1173.9824561865846 1250.7904798280438 1244.8734696836907 1208.3690158384159 1233.7199124244444 1.1845775819433286 0.9902298505989748 0.680182038571886 0.8449253165882719 1.074595461862922 0.9499298185587708 0.9515794017456792 1.0138366635989957 1.0090405910992617 0.9794516597075829 1.0 10.26879918577712 -6.758912045738024 24.998790296276628 1.0009211630647612 0.9121540285782094 0.07647105016231037 0.11669630744561633 117.32362546483019 1160466.254434652 0.016602923485792325 0.03333135971977073 1.7421596636263917e-07 6.758912045738024 -0.08876713448655182 WHQPPPS(ph)PLPLR ddPTM_A549_MK2206_60min_R1 2 WHQPPPSPLPLR 12 0 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 J3QQY0;Q68DK7 MSL1 Male-specific lethal 1 homolog 1 WHQPPPS(1)PLPLR;WHQPPPS(1)PLPLR 63.128 0.0022114 11041600.0 1047.3600000000001 1144.24 1011.09 973.8299999999999 1661.79 1229.4 869.41 1067.4099999999999 1653.33 1401.2600000000002 1781.34 True False 1224.1287625064851 1202.4769285558032 1154.4777656463864 1212.4183937168898 1417.3428923599022 1359.494291990327 1027.3705431746776 1218.718636306027 1278.8533948254847 1084.7143927826648 1338.984115517065 0.9142220197539632 0.8980516756103952 0.8622042280169775 0.9054763082448515 1.058521065287304 1.0153177145535752 0.7672761246894597 0.9101815489688644 0.9550922822797191 0.8101025099642718 1.0 10.386923130611326 WHQPPPS(ph)PLPLR ddPTM_A549_PD325901_60min_R1 2 WHQPPPSPLPLR 12 0 J3QQY0;J3KSZ8;Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 J3QQY0;Q68DK7 MSL1 Male-specific lethal 1 homolog 1 WHQPPPS(1)PLPLR;WHQPPPS(1)PLPLR 55.841 0.0054175 20273700.0 1016.46 1172.31 1119.37 1007.4100000000001 1583.44 1312.24 1068.5900000000001 1025.29 1326.9099999999999 1147.65 1277.4 True False 1119.650270921697 1271.1046779223027 1195.3371795186272 1069.6354277058895 1472.2246369714496 1301.5535525117857 1109.2557772048858 1004.8397866255548 1271.1445871538224 1075.1871831408264 1120.2878981057722 0.9994308363188129 1.1346232339664988 1.06699106679609 0.9547862022918144 1.3141484786729787 1.1618027425918862 0.9901524233908623 0.8969478187924534 1.134658858051689 0.9597418529279804 1.0 10.129653816762362 -11.112095294561474 1.4282877735599886 0.9996036545132017 1.0811580473153573 0.08417952227299563 0.1101773794999413 1.0503511383761555 3.801174270649773 0.08206581344335809 0.017411658187893652 7.725110591568784e-12 11.112095294561474 0.0815543928021556 WHQVET(ph)TPLREEK ddPTM_A549_PD325901_60min_R1 1 WHQVETTPLREEK 13 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 WHQVET(0.865)T(0.135)PLREEK 152.34 1.9902999999999999e-13 18326000.0 2144.0 2313.6 2704.4 2950.0 3066.8 3023.9 2722.2 2636.2 3380.3 3262.0 3069.1 True False 2361.6573016706197 2508.575191579906 2887.936846878308 3132.2148000639004 2851.39854788564 2999.274360970851 2825.794810644997 2583.6189229411057 3238.237746309895 3056.0367633035958 2691.6201566278587 0.8774110625733216 0.9319945035345266 1.0729362535672198 1.1636912408874334 1.059361418759011 1.1143007506409932 1.049849030030016 0.9598750093244731 1.2030812513927875 1.1353893140450728 1.0 11.39425911481298 -5.707494068772124 3.481497040519329 1.0882501818708046 0.88916895629981 0.5268671025748992 0.06646465644903339 0.1610470262094104 3.855245977480051 0.011312791082242916 0.050323077434539225 1.961127958725372e-06 5.707494068772124 -0.1990812255709946 WHQVETT(ph)PLREEK ddPTM_A549_MK2206_60min_R1 4 WHQVETTPLREEK 13 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 WHQVET(0.123)T(0.877)PLREEK;WHQVET(0.028)T(0.972)PLREEK;WHQVET(0.151)T(0.849)PLREEK;WHQVET(0.144)T(0.856)PLREEK 106.42 5.243100000000001e-05 26718600.0 4664.01 4959.37 4687.15 3187.84 6471.8 4766.7 4711.57 4451.54 7274.5 7103.299999999999 6922.78 True False 5451.180863903403 5211.780749818039 5351.858350146334 3968.8609431075747 5519.806793141616 5271.109030120623 5567.601281450083 5082.559427269493 5626.837364989441 5498.659596543897 5203.662666991828 1.0475661496049018 1.0015600709242178 1.0284791103186894 0.7627052707092413 1.0607541545986776 1.0129613250214364 1.069938932968659 0.9767273077690982 1.0813224693987025 1.056690248471199 1.0 12.34531172549718 WHQVETT(ph)PLREEK ddPTM_A549_PD325901_60min_R1 1 WHQVETTPLREEK 13 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 WHQVET(0.2)T(0.8)PLREEK 130.21 2.4628e-08 15561000.0 2148.9 2521.2 2387.3 2223.3 2973.0 2988.9 2616.3 2501.5 2994.2 2798.0 3016.3 True False 2367.0547460634302 2733.670372152171 2549.316534001106 2360.628191519345 2764.186736293207 2964.559389366637 2715.864728194293 2451.605620111214 2868.3641866109774 2621.333802490334 2645.314221901084 0.8948104260983863 1.0334010037520567 0.9637102892710462 0.8923810154480831 1.0449370110393519 1.1206832688617703 1.0266699909255044 0.9267729329899195 1.0843188921993534 0.9909347557986832 1.0 11.3692233867569 -6.787823844984018 24.982133281903003 1.0374818564738497 0.9535728073349129 0.29328380127296794 0.059382747454417094 203.28535159544901 192480.26378003054 0.008717042626175793 0.016477086314018532 1.6299570285666082e-07 6.787823844984018 -0.08390904913893682 WIPGAADDSKLEVFT(ph)TPK ddPTM_A549_MK2206_60min_R1 1 WIPGAADDSKLEVFTTPK 18 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 WIPGAADDSKLEVFT(0.5)T(0.5)PK 83.395 6.0102e-05 4625300.0 3973.0 4493.7 4449.3 5473.9 6742.3 5278.7 4918.3 5223.3 7917.3 6256.3 6126.9 True False 4643.545269475883 4722.410135855424 5080.277643622689 6815.005745732708 5750.516601470803 5837.288530282526 5811.891446493613 5963.718770685373 6124.044191330111 4842.9974848109405 4605.421636162388 1.0082779897966656 1.0254023429200114 1.103108041993738 1.4797788962948302 1.2486406361400173 1.2674818923086986 1.2619672867426217 1.294934371232691 1.3297466931677429 1.051586123360145 1.0 12.169117528829828 -6.006774643136704 23.931998680532054 1.2112027701551937 1.0286937885599048 0.32207181432568077 0.1246283457800964 223.01633702723177 787845.6829320708 0.02136625016434432 0.06299876936298576 9.845218449249878e-07 6.006774643136704 -0.18250898159528894 WIPGAADDSKLEVFT(ph)TPKK ddPTM_A549_MK2206_60min_R1 2 WIPGAADDSKLEVFTTPKK 19 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 WIPGAADDS(0.003)KLEVFT(0.499)T(0.499)PKK;WIPGAADDS(0.006)KLEVFT(0.497)T(0.497)PKK 82.975 5.4186000000000006e-05 10248100.0 2566.3999999999996 2936.0 2890.1 2453.1 3748.2000000000003 2875.9 3035.5 2611.6 4338.1 3510.1 3535.7999999999997 True False 2999.545577544151 3085.429859330071 3299.9596381080046 3054.109610123844 3196.8447452105147 3180.2258291320836 3587.0110578515687 2981.8022976895654 3355.527276522195 2717.165972129675 2657.7632768843905 1.1285977211109715 1.1609122174895201 1.2416303840184142 1.1491277784920249 1.2028327628027398 1.1965797920348118 1.3496352700216798 1.1219217014635838 1.2625380543506382 1.0223506343706128 1.0 11.375996896246146 -10.860134198577523 1.0208507962568765 0.9957676463432595 1.206035682373858 0.5722267131063334 0.06325453569237977 0.30187698472565655 0.539619461742467 0.04726629138730853 0.010577051083722904 1.3799577867298591e-11 10.860134198577523 0.21026803603059852 WIPGAADDSKLEVFTT(ph)PK ddPTM_A549_MK2206_60min_R1 1 WIPGAADDSKLEVFTTPK 18 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 WIPGAADDS(0.003)KLEVFT(0.164)T(0.833)PK 47.808 0.0085369 5295800.0 1571.4 1829.5 2307.1 1949.9 2962.8 2444.0 2248.1 2208.1 3147.5 2790.8 2357.6 True False 1836.6139029585713 1922.6137355736937 2634.2814716027033 2427.6255875343363 2526.9760447974286 2702.6224578041006 2656.550670122259 2521.1049370226433 2434.5962755246765 2160.3563417052223 1772.1428535501539 1.036380277853595 1.0849090025231882 1.486494989004649 1.3698814306482383 1.4259437605355059 1.5250590280517773 1.4990612437368471 1.4226307613813893 1.3738149103766788 1.2190644435787759 1.0 10.791279189797383 -10.540649397631428 0.86183459548375 1.0017406718020327 1.3659415310165626 0.21946208950419122 0.16350018894210108 0.47468282012822194 0.6361250155379865 0.10656562991582091 0.030544805844545303 2.8797222527265372e-11 10.540649397631428 0.3642008592145298 WIPGAADDSKLEVFTT(ph)PK ddPTM_A549_PD325901_60min_R1 1 WIPGAADDSKLEVFTTPK 18 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 WIPGAADDSKLEVFT(0.167)T(0.833)PK 81.665 8.915e-05 7719200.0 3420.7 3958.3 3475.9 4960.3 4977.3 4927.0 4458.9 4174.3 4641.6 4349.1 5022.1 True False 3767.9669458137537 4291.87983265506 3711.7954762846884 5266.686465341343 4627.7116187528345 4886.876145541642 4628.5858795037 4091.0403118249997 4446.5296935988 4074.4970837779515 4404.413537714889 0.8554979938983345 0.9744497867658872 0.8427445435131538 1.1957747428216792 1.0506987091756597 1.1095407149431897 1.0508972056936137 0.9288501810271717 1.0095622619273308 0.9250941240844279 1.0 12.10473421696158 -6.203672217131363 24.999936111397535 1.0235610281046201 0.8992526615163394 0.38769894706999797 0.07903573059739258 227.92593195106167 98639.2050756031 0.010102498873936782 0.026728688158889242 6.256447186900057e-07 6.203672217131363 -0.1243083665882807 WIPGAADDSKLEVFTT(ph)PKK ddPTM_A549_PD325901_60min_R1 1 WIPGAADDSKLEVFTTPKK 19 2 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 WIPGAADDSKLEVFT(0.129)T(0.871)PKK 94.837 9.8175e-07 9886800.0 2061.8 1988.0 2553.1 2482.4 3144.7 2738.9 2305.2 2613.6 2615.1 2718.1 2854.9 True False 2271.1124181830623 2155.535736886608 2726.368719037498 2635.7322100605525 2923.8271206260524 2716.5953064794016 2392.9256474538424 2561.469697670465 2505.196441255218 2546.478702126152 2503.765398702184 0.9070787619959456 0.860917615525768 1.0889074193815043 1.0527073388851738 1.1677719973850607 1.085003933630338 0.9557307760120837 1.0230470071190343 1.0005715561664745 1.0170596268508656 1.0 11.289883673615881 -5.750579092768787 24.999638198675363 1.0235675753840687 0.8839981280264361 0.5104667574840429 0.05758938911308983 152.3494179642569 350690.94424475165 0.008628215339095888 0.032763826226445435 1.7759098139936712e-06 5.750579092768787 -0.13956944735763266 WIS(ph)ENQDSADVDPQEHSFTR ddPTM_A549_MK2206_60min_R1 2 WISENQDSADVDPQEHSFTR 20 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 WIS(1)ENQDSADVDPQEHSFTR;WIS(1)ENQDSADVDPQEHSFTR 125.05 2.1636e-15 15897800.0 2106.8 2220.9 1977.77 1530.05 3466.5 2252.9 2250.0 2660.2 3309.6000000000004 3123.8 3907.9 True False 2462.376333685324 2333.9343237691246 2258.247525504606 1904.9123186865554 2956.582442044784 2491.300382646012 2658.795875528259 3037.2914965208224 2559.980884345185 2418.1314104266794 2937.4605774468328 0.8382670230848034 0.7945414967229013 0.7687754323727531 0.6484894923567817 1.0065096582894641 0.8481136399833451 0.9051341474816379 1.0339854498271293 0.871494550088654 0.8232047194071481 1.0 11.520353774602329 -6.771647416070193 24.99995073457007 0.9395262291120209 0.765252651257607 0.5115559274204851 0.07663344348855648 113.24099751957392 277332.76901903196 0.01058441828281338 0.020162967532308524 1.691813880964092e-07 6.771647416070193 -0.17427357785441389 WISENQDSADVDPQEHS(ph)FTR ddPTM_A549_PD325901_60min_R1 2 WISENQDSADVDPQEHSFTR 20 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 WISENQDSADVDPQEHS(0.751)FT(0.249)R;WISENQDSADVDPQEHS(0.751)FT(0.249)R 162.71 1.3347999999999998e-27 29921000.0 2798.7 3195.3999999999996 3022.7 3523.6 3564.0 3772.8 3266.7 3678.3 3524.8 4611.5 3743.4 True False 3082.821963705953 3464.687572257274 3227.838598971702 3741.2447693237823 3313.6769351325247 3742.075567667854 3391.016056106829 3604.9334209294734 3376.6649138221833 4320.329102996488 3282.9855313677404 0.9390300183326131 1.055346585951548 0.9832022005978616 1.1395861278027395 1.0093486259599804 1.1398391896381128 1.0329061836267313 1.0980655828317358 1.0285348142900328 1.3159756757126415 1.0 11.680792676403621 -4.296737281559877 16.154076548013286 1.031821980844563 1.0457751884613142 0.0 0.10508424125622719 0.0 0.0 0.007555769049162744 0.0 5.0496667546854835e-05 4.296737281559877 0.013953207616751229 WISIMTER ddPTM_A549_MK2206_60min_R1 1 WISIMTER 8 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 75.109 0.013574000000000001 1833400.0 366.82 789.65 753.59 754.34 987.95 761.17 844.41 677.8 1198.6 621.97 788.4 False True 428.7302481120425 829.8398121321495 860.4603936479052 939.1533338636089 842.6238637294517 841.7165041762461 997.8283667799193 773.8802256754437 927.1190137708907 481.466545023075 592.618521266942 0.7234506393682608 1.400293413641644 1.4519633841486286 1.5847519106487258 1.4218655568307763 1.4203344545775665 1.683761696557662 1.3058657431444896 1.564444884018862 0.8124392467413296 1.0 9.21095990571687 -10.900595666242795 1.1164710548104488 0.9967504251395269 1.4220255172127412 0.3506144303118154 0.24544853232221944 0.49899774585337364 1.0906312008253622 0.1664978231847863 0.03847326003964799 1.2571998882941003e-11 10.900595666242795 0.42527509207321423 WISIMTER ddPTM_A549_PD325901_60min_R1 2 WISIMTER 8 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;A6NMY6;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ; 123.69 0.0031396 7316900.0 2502.1 2861.2 2738.5 3083.1000000000004 3303.3 3706.0 3185.4 3660.0 4022.6 3326.8 3157.1000000000004 False True 2756.111350051333 3102.3233653822745 2924.3510779382686 3273.5360847718675 3071.28760376635 3675.8195647203843 3306.622140117762 3586.9984287855436 3853.5441109683143 3116.745280244759 2768.79671450582 0.9954184558266672 1.1204590604752949 1.056181214972372 1.1822955681873286 1.1092499451750177 1.3275873759393892 1.1942451834019652 1.2955080486744068 1.3917757453190642 1.125667790602331 1.0 11.435043419356324 -6.3072843508901935 1.2540031655869586 1.2062840942316642 1.0444312874404462 0.2825542737149429 0.10544932545678071 0.7832332548023415 2.222938966887582 0.022707350667320478 0.09838702368812366 4.928510079781357e-07 6.3072843508901935 -0.16185280679121794 WKELSKEDLSPAFDHS(ph)PNK ddPTM_A549_MK2206_60min_R1 1 WKELSKEDLSPAFDHSPNK 19 2 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 WKELSKEDLSPAFDHS(1)PNK 57.802 0.0015007 6639100.0 1158.6 1283.5 1259.2 1026.8 2088.4 1827.5 1667.5 2003.8 2861.3 1885.6 1862.0 True False 1354.1433549495991 1348.8246677282505 1437.7734944484953 1278.3660460948036 1781.1991264867524 2020.88483700368 1970.4631655303867 2287.8447863801325 2213.2201185571917 1459.6416503939242 1399.6140114143152 0.96751200252792 0.9637118925133209 1.0272642905279434 0.913370426181294 1.2726359638875322 1.4438872578601643 1.4078618458093501 1.63462552369582 1.581307489427549 1.0428887096657105 1.0 10.45081329711954 -6.834269025170197 5.269834016152459 1.3331962491934737 0.9721720370102219 0.4873558883978696 0.18426352437980467 0.18535762765522631 9.330024125512429 0.035113987649549386 0.0678950453785125 1.464640283565074e-07 6.834269025170197 -0.36102421218325176 WKELSKEDLSPAFDHS(ph)PNK ddPTM_A549_PD325901_60min_R1 3 WKELSKEDLSPAFDHSPNK 19 2 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 WKELSKEDLSPAFDHS(1)PNK;WKELSKEDLSPAFDHS(1)PNK;WKELSKEDLSPAFDHS(1)PNK 86.236 5.9017e-06 25514600.0 7891.0 7853.499999999999 9007.7 9301.7 10891.7 11270.6 9398.099999999999 10008.0 11179.1 11522.3 11043.2 True False 8692.088510952828 8515.342006860643 9619.016689700398 9876.244883306576 10126.704566325172 11178.815970355525 9755.74983833765 9808.38258887589 10709.281303367447 10794.780011591982 9684.956408612552 0.8974834933922061 0.8792339012789149 0.99319153167757 1.0197510929965483 1.0456117858537584 1.154245357306361 1.007309628122037 1.0127441131437183 1.105764533317258 1.114592524339345 1.0 13.241529840024429 -5.95724237585094 1.8407577066231458 1.0517085629831797 0.8804588619887461 0.6469982252011393 0.04777694522518567 0.1898753697008974 1.2045223546896173 0.007283344680173408 0.03491083532664347 1.10346261544679e-06 5.95724237585094 -0.1712497009944336 WKEPGSGGPQNLS(ph)GPGGR ddPTM_A549_MK2206_60min_R1 2 WKEPGSGGPQNLSGPGGR 18 1 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR 187.76 1.9773999999999997e-40 83423000.0 6721.299999999999 9237.8 7057.5 6436.3 11672.5 9228.4 9811.4 9917.5 11940.5 10565.2 11451.599999999999 True False 7855.691119992013 9707.964562165978 8058.359622832167 8013.193788936483 9955.490712467255 10204.943162683856 11594.004379181317 11323.335996069945 9235.995815060334 8178.513982149929 8607.85167191845 0.9126192480313963 1.1278034208972776 0.9361638571353522 0.930916806463809 1.1565592777284062 1.185538918610276 1.346910335014792 1.315465975443126 1.0729733930233825 0.9501225501864585 1.0 13.071437502655208 -5.250799913888284 23.29208287713574 1.0809867485303497 0.9126190156872194 0.11740222503993658 0.1387519684705205 1118.0912464983319 2447612.013334641 0.02021685488049608 0.37476765548536867 5.613065189707965e-06 5.250799913888284 -0.16836773284313034 WKEPGSGGPQNLS(ph)GPGGR ddPTM_A549_PD325901_60min_R1 4 WKEPGSGGPQNLSGPGGR 18 1 M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8;M0QZH1;M0QX70 M0QYR7 SMG9 Protein SMG9 1 WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR 181.82 3.7646e-40 122915000.0 15829.5 14709.8 18324.9 18594.6 20577.1 21392.5 17800.499999999996 19508.0 22825.3 19278.3 19631.1 True False 17436.499186938 15949.446470047596 19568.5379105755 19743.14621059939 19131.835483141265 21218.28657266077 18477.90776830735 19118.89763627006 21866.032018118898 18061.064847944745 17216.599151796014 1.0127725593889456 0.9263993620008149 1.1366087888811731 1.1467506466594948 1.1112435919811408 1.2324319330189728 1.073261194350323 1.110492116805519 1.2700552429274548 1.0490495067407455 1.0 14.071512570403039 -5.770013715047399 24.927262635264785 1.1327923211982287 0.9695859583631637 0.3886591945226985 0.07499151486246872 147.0330039946256 427458.9799800593 0.013512592106982035 0.042992801658611 1.6981900226658593e-06 5.770013715047399 -0.16320636283506496 WKES(ph)PR ddPTM_A549_PD325901_60min_R1 1 WKESPR 6 1 Q96CN4;Q96CN4-2 Q96CN4 EVI5L EVI5-like protein 1 WKES(1)PR 41.979 0.040897 2359900.0 1253.5 1297.8 1238.9 1265.7 1231.6 1437.8 1219.4 1527.5 1311.6 1278.1 1449.3 True False 1380.754397222072 1407.1701606294962 1322.9792041109079 1343.879414386739 1145.096664789343 1426.0910335010706 1265.8049342812837 1497.0328141994316 1256.4780132118626 1197.4005478780894 1271.0452878696544 1.0863140836911456 1.1070967919545927 1.0408592177925444 1.0573025424130706 0.9009094134706966 1.121982864899552 0.9958771307062129 1.1777965966173758 0.9885391379860214 0.9420597041707318 1.0 10.311799719742146 -2.0000000008073324 0.12258859387166246 0.9732274257564569 1.3353578375531265 0.13867849548868905 0.07283439888548317 120.69404827314148 0.9756628354697734 0.23237801559489074 7.535707368640405 0.009999999981410483 2.0000000008073324 0.3621304117966696 WKGPPGS(ph)ADK ddPTM_A549_MK2206_60min_R1 1 WKGPPGSADK 10 1 P42285;D6REC7 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 1 WKGPPGS(1)ADK 41.092 0.025766000000000004 3343700.0 1812.0 2819.5 2994.5 2585.2 3992.0 2875.2 2718.0 2669.0 3811.6 3353.7 3996.5 True False 2117.8213008533353 2963.000506941803 3419.1651279590374 3218.5741160540388 3404.7820881704224 3179.451755596706 3211.8254176381356 3047.3389234696956 2948.27868587446 2596.096840754194 3004.058752211229 0.7049866449164646 0.9863324093647623 1.1381818432952606 1.0714085114630028 1.1333939742903592 1.0583853439139208 1.0691619846895382 1.0144072319579664 0.98143176584156 0.8641964271981225 1.0 11.552697313457983 -5.275070161658778 4.3094074431103 1.0254248221931896 0.6847094067819616 0.6265356717410075 0.07285814304670797 0.08677286218593037 3.731022451410448 0.008908632744338538 0.08811991260503761 5.307986850832308e-06 5.275070161658778 -0.3407154154112281 WKGPPGS(ph)ADK ddPTM_A549_PD325901_60min_R1 2 WKGPPGSADK 10 1 P42285;D6REC7 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 1 WKGPPGS(1)ADK;WKGPPGS(1)ADK 61.211999999999996 0.0021276999999999997 11775600.0 7507.0 8540.3 7910.7 7086.9 9195.7 9285.0 7562.2 8331.1 10803.4 8412.7 9180.3 True False 8269.105113638685 9260.02105318546 8447.567672903504 7524.641717482323 8549.825755442807 9209.38603843194 7849.983659194624 8164.929674878488 10349.3706678355 7881.520686279635 8051.1812987164785 1.027067309359553 1.150144396159815 1.0492333186249598 0.9346009533634404 1.0619343222100617 1.1438552551164265 0.9750101715441523 1.0141281598242164 1.285447474581823 0.9789272398494007 1.0 12.97498476090385 WKPNS(ph)SK ddPTM_A549_PD325901_60min_R1 2 WKPNSSK 7 1 Q99618;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 WKPNS(0.816)S(0.184)K;WKPNS(0.954)S(0.046)K 52.79 0.012958 10307800.0 7293.4 8936.5 8532.1 9732.6 10283.5 8594.8 8715.6 9237.8 8461.8 8618.8 8868.3 True False 8033.820598882696 9689.610217649471 9111.139613685269 10333.760597661665 9561.22243614908 8524.80679839686 9047.276927359315 9053.544832086092 8106.179972702153 8074.607497106393 7777.555320785523 1.0329493353023544 1.2458426610935163 1.1714657418553798 1.3286643645008454 1.2293351884745463 1.0960779379626278 1.1632545901898583 1.1640604867046702 1.0422529494632304 1.0381935150659742 1.0 12.925101036168975 -8.671968968466897 0.9100972929456526 1.0091649681689585 1.198321221978541 0.44788641950430064 0.07421131280707537 0.27735172549066156 0.4594459863090612 0.01640866361339001 0.01786592447209293 2.128291112793158e-09 8.671968968466897 0.18915625380958256 WKQS(ph)VR ddPTM_A549_PD325901_60min_R1 2 WKQSVR 6 1 P53355-4;P53355;P53355-3 P53355-4 DAPK1 Death-associated protein kinase 1 1 WKQS(1)VR;WKQS(1)VR 53.968 0.023615999999999998 46218000.0 8419.1 7976.5 9012.4 8815.3 9953.6 9625.3 8800.7 7814.2 10982.599999999999 10009.8 9259.4 True False 9273.800834186159 8648.70764852918 9624.035659963787 9359.801060001117 9254.493474055855 9546.914748058049 9135.615454427829 7658.339650878687 10521.03951502028 9377.779519716849 8120.55250017269 1.1420159938611252 1.0650393120844004 1.1851454269594495 1.1526064340821727 1.139638401926353 1.1756484239040417 1.1249992478016184 0.9430811081777781 1.2956063660442492 1.1548203794652423 1.0 12.987362172434944 -11.213263154995815 1.6651121774657718 0.9999511485900134 1.157077392774441 0.0 0.09438515782059355 0.40457015989107425 2.019504846252997 0.06838690626352696 0.014179318316956964 6.119794584983811e-12 11.213263154995815 0.15712624418442767 WKSEEEVES(ph)DDEYLALPAR ddPTM_A549_MK2206_60min_R1 1 WKSEEEVESDDEYLALPAR 19 1 Q5HYA6;Q76N32-2;Q76N32 Q5HYA6 DKFZp686H16130;CEP68 Centrosomal protein of 68 kDa 1 WKSEEEVES(1)DDEYLALPAR 103.67 5.3782e-10 2921000.0 1504.4 2209.1 1580.9 1397.9 2507.6 1746.8 1704.3 1713.2 3180.9 2384.9 2947.2 True False 1758.3059409513016 2321.5337541709996 1805.0953918151433 1740.385562754115 2138.735361797634 1931.6452165680025 2013.949249183472 1956.0513464549576 2460.4312288535184 1846.1494336150156 2215.3289014179736 0.7936997255016428 1.047940896128357 0.8148204948979582 0.7856104624645759 0.96542565775614 0.87194511629023 0.9090971764483351 0.8829620492031413 1.1106392496746922 0.8333522992605495 1.0 11.113305190764718 -8.749480308060917 24.81984865552215 1.0522463107962403 0.8869781256346877 0.047477252307601914 0.10046772598076584 123.46753532486603 256244.13024876316 0.013022931493725645 0.014709819056406982 1.7804086349624175e-09 8.749480308060917 -0.16526818516155262 WKSEEEVES(ph)DDEYLALPAR ddPTM_A549_PD325901_60min_R1 2 WKSEEEVESDDEYLALPAR 19 1 Q5HYA6;Q76N32-2;Q76N32 Q5HYA6 DKFZp686H16130;CEP68 Centrosomal protein of 68 kDa 1 WKSEEEVES(1)DDEYLALPAR;WKSEEEVES(1)DDEYLALPAR 217.21 4.2069999999999994e-67 25854000.0 6808.2 7648.9 7955.7 7608.4 9267.0 10157.5 8720.7 9671.4 9901.7 8862.7 9163.7 True False 7499.363452068054 8293.499646816881 8495.621643510485 8078.3535880698955 8616.117889414445 10074.780687708393 9052.571010650152 9478.496339933468 9485.565983089287 8303.10760948216 8036.622993480405 0.9331485946462594 1.031963257893877 1.0571133734159779 1.0051925534672141 1.0721067662877986 1.2536087229525903 1.1264147911372626 1.1794128389029523 1.1802925172406764 1.0331587802759863 1.0 12.972373689794393 -5.515160974509463 0.8377672201639869 1.1063254037074446 0.8963874706205172 0.355624922747783 0.0729636790090684 1.9266033568185834 1.237371881444808 0.014024566294482342 0.3419083115068912 3.053788993602422e-06 5.515160974509463 -0.20993793308692743 WLAES(ph)PVGLPPEEEDKLTR ddPTM_A549_MK2206_60min_R1 2 WLAESPVGLPPEEEDKLTR 19 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 1 WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR 84.181 3.053e-05 7325800.0 1860.83 1766.66 2113.33 1904.96 2534.3 2084.18 1982.5500000000002 2267.72 3495.3 2863.8 2860.1 True False 2174.892611074454 1856.5754479850345 2413.0319719050494 2371.6752855169043 2161.5078271669104 2304.7265442332855 2342.753672457134 2589.176254601234 2703.6201308471504 2216.86559100452 2149.858235255684 1.011644663544893 0.8635804061583766 1.1224144607926048 1.1031775242774737 1.0054187721404992 1.0720365214961176 1.0897247241879224 1.2043474365616957 1.2575806564871506 1.031168267121049 1.0 11.070025814227181 -7.65571551964062 2.179331217615083 1.131104887974205 1.0226910449938729 0.19516224988524888 0.09135447540016699 0.4454190716234602 4.315878690525404 0.01824661957439357 0.028545367717492776 2.2094515387638174e-08 7.65571551964062 -0.10841384298033208 WLDDLLAS(ph)PPPSGGGAR ddPTM_A549_MK2206_60min_R1 2 WLDDLLASPPPSGGGAR 17 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR 296.58 6.1764999999999985e-133 89220000.0 27744.0 40515.0 34764.0 37343.0 57387.0 44607.0 41991.0 41615.0 61601.0 47312.0 50079.0 True False 32426.508924323913 42577.04044644342 39694.05794235031 46492.03667639098 48945.44832009923 49327.28313226982 49620.221159692046 47514.05369059247 47648.47185658324 36624.18634038896 37643.00218991269 0.8614219652494494 1.1310745150357036 1.0544870396385984 1.235077809199012 1.300253578956444 1.3103971591694195 1.3181791640675495 1.2622280616960184 1.2657989290065643 0.9729347876031857 1.0 15.20009407328478 -4.703964824870384 1.2040295373279999 1.1796887974943933 0.14564601139374003 0.38958790990371517 0.11921034639926793 4.769943936661365 2.241033996183374 0.020178251791768666 8.565222427743443 1.9771297687399485e-05 4.703964824870384 -1.0340427861006531 WLDDLLAS(ph)PPPSGGGAR ddPTM_A549_PD325901_60min_R1 2 WLDDLLASPPPSGGGAR 17 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR 321.48 1.4490999999999996e-172 172979000.0 43344.0 46551.0 53480.0 54906.0 62398.0 64822.0 57306.0 62118.0 69141.0 61645.0 61888.0 True False 47744.25097183364 50474.01614074874 57109.47440136518 58297.41891942658 58015.3797414139 64294.111123665585 59486.811189046464 60879.0077593717 66235.24421430426 57752.72417959849 54276.16834035546 0.8796540439708009 0.9299480358347304 1.052201659543146 1.0740886967896226 1.068892324484119 1.184573507851356 1.096002407834246 1.1216526446305328 1.2203375116488644 1.0640530815926836 1.0 15.728031255953116 -5.689598266128248 1.1849221581356446 1.110863793919113 0.839896077973582 0.6528239557255477 0.05607477679095188 0.5295325751134213 0.9749085004834187 0.011887886054030228 0.14564483296130343 2.0436274800204757e-06 5.689598266128248 -0.27096771594553104 WLDES(ph)DAEMELR ddPTM_A549_MK2206_60min_R1 11 WLDESDAEMELR 12 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR 261.38 1.4756999999999997e-64 557817600.0 70267.9 92645.99999999999 88474.9 87697.40000000001 179682.2 147817.10000000003 127316.29999999999 147015.1 197048.99999999997 111487.1 113972.5 True False 82127.40363478592 97361.28567693908 101021.97120710072 109183.26693688601 153251.18640357125 163459.00740895065 150448.0237011194 167854.94063986136 152417.71612259327 86302.08667884624 85669.98276902147 0.9586485368651602 1.136469070379517 1.1791991540312365 1.2744635099467652 1.7888551094583311 1.9080079407703339 1.756134632438865 1.9593203501910617 1.7791262609861056 1.007378359250159 1.0 16.386502177864337 -6.542051530783914 6.138115110822694 1.517990699060691 1.1150312776469462 0.3205961006400996 0.3167684579105303 0.21929805977557504 29.53869664760584 0.05647929053537647 0.12132794988738843 2.870439972590556e-07 6.542051530783914 -0.40295942141374486 WLDES(ph)DAEMELR ddPTM_A549_PD325901_60min_R1 11 WLDESDAEMELR 12 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR 243.37 7.914799999999998e-51 2415949650.0 39994.0 43269.5 48772.299999999996 46557.8 57576.69999999999 48321.6 47404.24 46998.19999999999 56768.1 52699.38 48851.98999999999 True False 44054.16143797333 46915.972619323475 52082.281569665334 49433.56956556446 53532.71122083186 47928.084910575424 49208.23429379545 46060.78403162536 54382.33417338545 49371.93215306757 42843.50492827951 1.028257643993424 1.0950544942077294 1.2156400755925931 1.153817122299326 1.2494942071253554 1.118677965091968 1.1485576256230803 1.0750937419506552 1.2693250532238682 1.15237845819843 1.0 15.386788888017866 -11.087657658867704 1.4230485243277986 1.000228812624964 1.1657071104063927 0.0 0.08306005496674061 0.3473954070477667 1.259555746081664 0.054189682553090965 0.01195047922309908 8.172263121741228e-12 11.087657658867704 0.16547829778142864 WLDESDAEMELR ddPTM_A549_PD325901_60min_R1 2 WLDESDAEMELR 12 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 0 ; 143.89 2.4778e-11 2914700.0 2978.1 2803.3 3342.3 3434.1 3622.5 3320.5 2982.5 3147.1 3590.8 3396.1 3598.0 False True 3280.4345196386544 3039.543929182204 3569.128576882625 3646.216557593031 3368.0680969465675 3293.458948908267 3096.0006695866246 3084.3286216478123 3439.891163343365 3181.6696664179476 3155.4688096011987 1.0396028981992218 0.963262232202623 1.1310929666053984 1.1555229278447077 1.0673748657247029 1.0437304716456721 0.9811539445949745 0.9774549544787364 1.0901363223356064 1.0083033166853137 1.0 11.623638647727757 -7.298627830052744 4.529207847883643 1.0328763638329892 1.0735175522711726 0.162576903311751 0.055705161382126445 0.43819134383963004 21.399938671703698 0.009469141929929276 0.015648589798552135 5.027732580027098e-08 7.298627830052744 0.04064118843818343 WLIS(ph)PVK ddPTM_A549_MK2206_60min_R1 2 WLISPVK 7 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 WLIS(1)PVK;WLIS(1)PVK 90.65700000000001 0.011109 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 WLIS(ph)PVK ddPTM_A549_PD325901_60min_R1 1 WLISPVK 7 0 C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3 C9JWC4 HJURP Holliday junction recognition protein 1 WLIS(1)PVK 90.65700000000001 0.011237 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 WLKSPT(ph)TPIDPEK ddPTM_A549_MK2206_60min_R1 1 WLKSPTTPIDPEK 13 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 WLKS(0.065)PT(0.648)T(0.288)PIDPEK 68.173 0.0015785999999999999 3246600.0 3448.1 4058.8 4347.1 4016.3 5381.2 4895.3 4351.0 4817.5 5739.0 4726.5 5796.3 True False 4030.05498204878 4265.3755834635185 4963.584146852806 5000.29368029856 4589.6326084325365 5413.317396762853 5141.520379743756 5500.39537797499 4439.125663299799 3658.7803673031854 4356.918740258216 0.9249782294103415 0.9789890144269086 1.1392418456164817 1.1476674178234074 1.0534124875968032 1.2424646222440285 1.1800817702280673 1.2624507607064082 1.0188681331790712 0.8397632789190705 1.0 12.089092490841555 -8.960839975869574 24.970252168933225 1.0083240179432897 1.1190948698557246 0.27245405733829664 0.10905370177524766 180.31647439512525 114978.67770506984 0.017480225522505072 0.018578543248776266 1.0943595297464051e-09 8.960839975869574 0.11077085191243485 WLNSGRGDEASEEGQNGS(ph)SPK ddPTM_A549_MK2206_60min_R1 2 WLNSGRGDEASEEGQNGSSPK 21 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2 P35611 ADD1 Alpha-adducin 1 WLNSGRGDEASEEGQNGS(0.572)S(0.428)PK;WLNSGRGDEASEEGQNGS(0.5)S(0.5)PK 194.21 7.0976e-47 91853000.0 3083.1 4373.6 4870.0 5107.2 7549.9 5261.9 5603.3 4643.5 10284.8 7847.099999999999 7931.5 True False 3603.4519054420084 4596.1975588440055 5560.639229641183 6358.4642292709195 6439.319711292053 5818.710765433467 6621.347079709996 5301.730345122338 7955.309221450736 6074.434659952361 5961.889651736108 0.6044143913989887 0.7709296594420509 0.9326974423322175 1.0665182686531824 1.080080324770338 0.9759843112391475 1.1106121492506749 0.8892701232030467 1.3343603599127571 1.0188774054520582 1.0 12.541553957480874 -4.894738930967325 0.5666298432639225 1.1323063384721017 4.230456886453376e-13 0.5911504178428073 0.11524013482256584 2.7062400160642053 0.4370060497708256 0.02523993300661697 2.205228045579505 1.2742688567321627e-05 4.894738930967325 -1.1323063384716787 WLNSGRGDEASEEGQNGS(ph)SPK ddPTM_A549_PD325901_60min_R1 2 WLNSGRGDEASEEGQNGSSPK 21 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;H0Y9H2 P35611 ADD1 Alpha-adducin 1 WLNSGRGDEASEEGQNGS(0.5)S(0.5)PK;WLNSGRGDEASEEGQNGS(0.64)S(0.36)PK 208.88 1.4012999999999999e-67 235480000.0 10926.599999999999 12636.0 13760.0 15909.1 15969.800000000001 18966.0 17116.5 17976.8 20194.3 16439.7 17090.9 True False 12035.860388262225 13700.880066045856 14693.836345601807 16891.7689748124 14848.136340819125 18811.54718415725 17767.877774008182 17618.238621473207 19345.603798569926 15401.694536383246 14988.827648141509 0.8029887774281381 0.9140728272864391 0.9803192544831031 1.126957315898341 0.9906135882922219 1.255037927298452 1.1854081046966507 1.1754247253391912 1.2906682398852336 1.0275449753598926 1.0 13.87159992678752 -5.771266593247683 0.8959237224262292 1.1505928959892169 0.7472976309168609 0.5913886835310078 0.09187312120742669 0.7444815128434721 0.7002093940694205 0.01792815949181509 0.2453907484695383 1.6932980441862423e-06 5.771266593247683 -0.403295265072356 WLPSS(ph)PSGVAK ddPTM_A549_MK2206_60min_R1 2 WLPSSPSGVAK 11 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 WLPS(0.369)S(0.629)PS(0.002)GVAK;WLPS(0.012)S(0.987)PS(0.001)GVAK 145.55 2.1355000000000003e-11 31602000.0 4770.700000000001 5238.2 5709.6 5647.5 7772.799999999999 5800.9 5244.299999999999 5359.3 8153.1 6997.9 6687.6 True False 5575.877527583337 5504.802005838818 6519.30713461176 7031.137753525904 6629.431416565898 6414.747387674221 6197.121426681262 6118.997187167905 6306.4358678253375 5417.069529747371 5026.884351629632 1.1092114195497118 1.0950723392023636 1.2968882270980253 1.3987068851596967 1.3187952920414305 1.2760881172041816 1.2327957027044514 1.2172544182728668 1.2545416657100728 1.0776196846444752 1.0 12.295448783472645 -10.655599252665434 0.6727606527501073 0.9774421940111517 1.2515139940341342 0.4538650318085692 0.08537579729644393 0.5977859507364162 0.4202653900253019 0.09396386026413718 0.018438223443058187 2.2100431203912774e-11 10.655599252665434 0.2740718000229825 WLPSS(ph)PSGVAK ddPTM_A549_PD325901_60min_R1 2 WLPSSPSGVAK 11 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 WLPS(0.099)S(0.896)PS(0.004)GVAK;WLPS(0.181)S(0.817)PS(0.001)GVAK 147.62 1.6227e-11 54994000.0 7217.9 7694.599999999999 9010.1 9688.9 9162.900000000001 10203.1 9100.4 9587.1 10768.5 9566.1 9137.4 True False 7950.655894462858 8343.050946201045 9621.579568132775 10287.361347911572 8519.329514288944 10120.009336427023 9446.720701929962 9395.877769565544 10315.937393467484 8962.09481343916 8013.5577267509725 0.9921505735114211 1.0411169708493087 1.2006626639768103 1.2837445861992303 1.06311451227831 1.2628609765478152 1.1788422850433566 1.1724976708160586 1.2873105486007388 1.1183665381883714 1.0 12.968227173388824 -5.63547564919857 4.929430416080005 1.1601419950662313 1.0038998129158299 0.3279530722823054 0.08597427207017644 0.23940271638530738 9.062497126340364 0.015566212006336178 0.0647966349624222 2.3148579759826516e-06 5.63547564919857 -0.15624218215040142 WLPVQES(ph)STDDKKPGER ddPTM_A549_PD325901_60min_R1 1 WLPVQESSTDDKKPGER 17 2 A0A5F9YFS9;C9JBL1;Q9Y6A9 A0A5F9YFS9 SPCS1 Signal peptidase complex subunit 1 1 WLPVQES(0.471)S(0.471)T(0.059)DDKKPGER 122.57 1.2481e-10 9359800.0 1853.0 1739.5 2264.4 2203.6 2594.1 2454.3 2237.1 2558.2 2848.9 2742.8 2415.7 True False 2041.1151958934981 1886.0937697757813 2418.0758009433675 2339.7113672612927 2411.8993651591686 2434.312994520573 2322.2340646880916 2507.174694130924 2729.1706403166168 2569.619139910825 2118.5842143839955 0.9634335902417632 0.8902614099407827 1.141364022504271 1.1043749648354633 1.1384486624528438 1.1490281943917813 1.0961254449652877 1.1834198882011002 1.288204935063276 1.2128944992908737 1.0 11.048884762082032 -5.7670141476959875 24.90386628928131 1.1382895033820875 0.9268474747957227 0.5869156307859584 0.07066642547768168 85.75943711127066 383117.27122603304 0.013947634445005217 0.04519311436277705 1.7099596100703782e-06 5.7670141476959875 -0.21144202858636474 WLPVQESS(ph)TDDKKPGER ddPTM_A549_MK2206_60min_R1 1 WLPVQESSTDDKKPGER 17 2 A0A5F9YFS9;C9JBL1;Q9Y6A9 A0A5F9YFS9 SPCS1 Signal peptidase complex subunit 1 1 WLPVQES(0.026)S(0.81)T(0.164)DDKKPGER 72.421 0.00016104 5765600.0 1195.5 1597.5 2137.8 1844.8 2728.9 2029.1 2236.4 2021.7 3136.0 2309.4 2756.1 True False 1397.271172831216 1678.8059265258132 2440.9721858576836 2296.776082816219 2327.482424951972 2243.8180151924294 2642.7249315695103 2308.282166196584 2425.70100716295 1787.7049360520418 2071.684305509662 0.6744614365785181 0.8103579884546186 1.1782549007905776 1.1086515820523057 1.1234735035458892 1.0830887743006867 1.2756407549843192 1.114205557312805 1.1708835176825823 0.8629234344719537 1.0 11.016588458740646 -5.634009988851629 4.252818518254656 1.1069824448211463 0.7032223008924148 0.6603134831229416 0.10094752779743595 0.07381787685870635 2.298366135396535 0.011651234717522494 0.050951455402011125 2.322683373605077e-06 5.634009988851629 -0.4037601439287315 WLPVQESS(ph)TDDKKPGER ddPTM_A549_PD325901_60min_R1 1 WLPVQESSTDDKKPGER 17 2 A0A5F9YFS9;C9JBL1;Q9Y6A9 A0A5F9YFS9 SPCS1 Signal peptidase complex subunit 1 1 WLPVQES(0.144)S(0.83)T(0.026)DDKKPGER 110.77 1.0897e-09 9241400.0 1835.2 2118.1 2092.8 2427.4 2535.1 2626.3 2341.0 2443.7 3051.3 2498.5 2401.1 True False 2021.5081529971649 2296.5997204725963 2234.82999302874 2577.3349849746137 2357.0433216202186 2604.912283546989 2430.0880360443525 2394.9584864544354 2923.064472181579 2340.7442836033215 2105.7799218269697 0.959980733049876 1.0906171612084097 1.06128374093804 1.2239336875899756 1.1193208260696366 1.2370296898295872 1.1540085508726923 1.1373261097373248 1.3881148936236105 1.111580682929343 1.0 11.040138950712443 -5.333121087763168 0.8900013235883535 1.183983279583015 0.8664782013194774 0.2917126924322083 0.09487987683450023 2.5701017680280813 1.6068060347198228 0.02109958427962779 0.7714180385319805 4.6438577950627194e-06 5.333121087763168 -0.3175050782635376 WLREAEEES(ph)DHN ddPTM_A549_PD325901_60min_R1 2 WLREAEEESDHN 12 1 Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 WLREAEEES(1)DHN;WLREAEEES(1)DHN 133.47 1.4164e-08 30853000.0 1548.02 1828.83 2357.5 2309.8 1996.3200000000002 4711.1 2868.8 3584.4 2932.6 2631.5 2604.8 True False 1705.1738508079084 1982.9519223794434 2517.494126799149 2452.4711000635934 1856.105370130124 4672.734363560226 2977.9737538675945 3512.906330092596 2809.353020391208 2465.346640905401 2284.4261131876588 0.7464342317592101 0.8680306668410728 1.102024754605116 1.073561139012479 0.8125040067678697 2.0454740630853463 1.3035981932951066 1.5377631650299828 1.2297850231063385 1.0791973645692956 1.0 11.157616065855159 -5.724108724934759 1.0671685640901794 1.2071362704565243 0.6798796216162638 0.240905809946385 0.30771464093208806 1.2479261015080403 1.7912285469172762 0.048539546491692176 0.6153478035316398 1.8875187526157368e-06 5.724108724934759 -0.5272566488402605 WLTS(ph)PVR ddPTM_A549_PD325901_60min_R1 2 WLTSPVR 7 0 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;A0A1W2PRD7;C9J1B4;H7BXZ5;O60229-5;O60229-6;O60229-4;O60229 E7EPJ7 TRIO;KALRN Triple functional domain protein;Kalirin 1 WLT(0.002)S(0.998)PVR;WLT(0.011)S(0.989)PVR 110.03 0.0085109 20376500.0 2219.0 2165.98 2542.4 2609.0 3072.5 3366.8999999999996 2486.0299999999997 3202.9 3605.7 2344.67 2458.8 True False 2444.2712464585384 2348.5147361074705 2714.942552693171 2770.152004531089 2856.698199549572 3339.4810826921353 2580.6372320578157 3139.015646873556 3454.1649681595122 2196.627136056115 2156.3831876174054 1.1335050562878954 1.0890989827751123 1.259026024819327 1.2846288268421526 1.3247637135893027 1.5486491927169672 1.1967433463943715 1.4556854574357279 1.6018326371650253 1.018662707384199 1.0 11.074397851321315 -5.909704344047965 2.70974071169166 1.3174868094735541 1.107782472219585 0.13613475574852318 0.18119583249357293 0.4805605818694755 6.984467801098183 0.03182893849625218 0.12555690089263188 1.2311065897091775e-06 5.909704344047965 -0.2097043372539691 WLTS(ph)PVRR ddPTM_A549_MK2206_60min_R1 2 WLTSPVRR 8 1 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;A0A1W2PRD7;C9J1B4;H7BXZ5;O60229-5;O60229-6;O60229-4;O60229 E7EPJ7 TRIO;KALRN Triple functional domain protein;Kalirin 1 WLT(0.015)S(0.985)PVRR;WLT(0.056)S(0.944)PVRR 74.464 0.0020998 14177600.0 756.39 1388.65 1250.02 1459.0500000000002 1997.51 1557.31 1814.2400000000002 1713.1799999999998 1864.71 1554.07 1527.01 True False 884.0501400399863 1459.3263535962888 1427.2916324098696 1816.5173154992438 1703.678925085496 1722.1035105412845 2143.863924097063 1956.0285113937089 1442.3561623299836 1203.00450765151 1147.8112736679761 0.7702051376572494 1.2713992161209802 1.243489818538529 1.5825923278261005 1.4842848856512574 1.5003368149870884 1.8677843416244506 1.7041377413405012 1.256614388984656 1.0480856350253094 1.0 10.164669734231316 -9.418135990994763 1.5776562097546323 1.0715433086482324 1.4355281089827265 0.22709383104748482 0.27329267237988364 0.3660359508543237 1.867327371589188 0.06573448102233918 0.05472864459952824 3.8182469103374724e-10 9.418135990994763 0.3639848003344941 WLTS(ph)PVRR ddPTM_A549_PD325901_60min_R1 2 WLTSPVRR 8 1 E7EPJ7;O75962-5;O75962-4;O75962;E7EWP2;O75962-2;A0A1W2PRD7;C9J1B4;H7BXZ5;O60229-5;O60229-6;O60229-4;O60229 E7EPJ7 TRIO;KALRN Triple functional domain protein;Kalirin 1 WLT(0.19)S(0.81)PVRR;WLT(0.019)S(0.981)PVRR 73.57300000000001 0.0021691999999999996 23254000.0 1845.9899999999998 1696.8300000000002 2243.37 2198.1 2356.45 2627.3 2634.06 2652.42 2745.3 1824.62 2288.7599999999998 True False 2033.3935458539877 1839.8278191254035 2395.618578679703 2333.8716447526967 2190.9410813111776 2605.904139878538 2734.3005947129386 2599.5154023167647 2629.924588037913 1709.4131818084018 2007.2570296450347 1.0130210111724332 0.9165880562145847 1.193478734062945 1.162716886917776 1.091509980512374 1.2982413818420497 1.3622075072251585 1.2950585619702453 1.3102081842019961 0.8516164878549192 1.0 10.971009650566279 -5.767570811157729 24.962745653740274 1.1833853574580606 0.9648045128212978 0.23437404890281377 0.14492781944753497 128.46208523758557 523014.7697242857 0.01948965917308347 0.06288637538985614 1.7077692477746291e-06 5.767570811157729 -0.21858084463676286 WNNNKKS(ph)PIK ddPTM_A549_MK2206_60min_R1 3 WNNNKKSPIK 10 2 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 WNNNKKS(1)PIK;WNNNKKS(1)PIK;WNNNKKS(1)PIK 81.494 0.00036578 292763000.0 16598.9 23382.9 23859.3 22311.9 31183.699999999997 25115.2 25307.6 24675.8 33303.8 29982.1 29295.6 True False 19400.388515857856 24572.989733558952 27242.90750960529 27778.31650161925 26596.61903879759 27772.87379387949 29905.66333311955 28173.670216468137 25760.542475240265 23209.122786527223 22020.694002572054 0.88100713417987 1.1159044183933888 1.237150269034358 1.2614641708555914 1.2078011272347302 1.26121700754007 1.3580708823085468 1.2794179063192743 1.1698333609390963 1.0539687252280223 1.0 14.426572317038993 -10.121054572858139 0.9229439032078037 1.0153054586080745 1.2050678479464079 0.2300031224411908 0.11790544291325376 0.5073588367694946 0.8622071798238644 0.05146215395530641 0.023554591797817142 7.567377983963706e-11 10.121054572858139 0.18976238933833334 WNNNKKS(ph)PIK ddPTM_A549_PD325901_60min_R1 4 WNNNKKSPIK 10 2 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 WNNNKKS(1)PIK;WNNNKKS(1)PIK;WNNNKKS(1)PIK;WNNNKKS(1)PIK 89.62899999999999 0.00022287 604407000.0 31179.199999999997 31360.4 35902.8 33659.5 43001.3 40530.299999999996 38488.4 39219.6 40069.6 37593.700000000004 37598.8 True False 34344.489431086084 34003.25096733339 38339.379909075076 35738.57086872911 39981.03703443158 40200.23467457812 39953.09712366063 38437.334310818995 38385.6140577875 35220.02736621903 32974.385958430685 1.0415505378745378 1.0312019459649606 1.1627018606929571 1.083828245165296 1.2124876892274465 1.2191352016458088 1.2116403675879723 1.1656724816430304 1.1641039838066585 1.068102599715407 1.0 15.009058173735134 -4.092834992264252 12.682587240497428 1.1091940366136512 1.1206129290069236 0.0 0.07818019382983667 0.0 0.0 0.012414513845992676 0.0 8.07541792912452e-05 4.092834992264252 0.011418892393272317 WNS(ph)FQLSHQPR ddPTM_A549_PD325901_60min_R1 2 WNSFQLSHQPR 11 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 WNS(0.994)FQLS(0.006)HQPR;WNS(0.984)FQLS(0.016)HQPR 44.251999999999995 0.017896000000000002 13282800.0 2699.6 3273.7 3383.8999999999996 3461.1 4496.8 3730.0 3539.9 3927.2 4321.1 3866.3999999999996 3925.1 True False 2973.6614046595173 3549.5861880511497 3613.551803043747 3674.8842862715824 4180.960281117826 3699.62411667756 3674.6128316076056 3848.868915171201 4139.499194030028 3622.274844156049 3442.337583258938 0.8638494432159339 1.0311557487312668 1.0497377772062426 1.0675548801905963 1.2145700937209118 1.074741807622204 1.0674760225372106 1.11809746199482 1.2025256366957104 1.0522718230112573 1.0 11.749172871235949 -4.801778434600596 1.0687648320571426 1.101940611055656 0.47861163151531105 0.5583368589643102 0.060237447945689554 2.911110798717185 1.3436418855044896 0.011619309491662996 2.6059464128274925 1.5784163300093805e-05 4.801778434600596 -0.6233289795403449 WNSVS(ph)PASAGK ddPTM_A549_MK2206_60min_R1 2 WNSVSPASAGK 11 0 E5RJU9;Q86UE4;H0YB56;H0YBE0 E5RJU9 MTDH Protein LYRIC 1 WNS(0.034)VS(0.866)PAS(0.101)AGK;WNS(0.037)VS(0.956)PAS(0.008)AGK 155.17 3.8228e-13 47563000.0 10709.9 15104.699999999999 12708.5 12373.3 20567.8 16586.300000000003 15870.0 15699.5 21152.9 19826.2 20120.8 True False 12517.469288084518 15873.464712609975 14510.756396282326 15404.75905545855 17542.3038659999 18341.45125690513 18753.37357539265 17924.952202702316 16361.801924240184 15347.447650106093 15124.25005417033 0.8276423123957128 1.0495373096686575 0.9594364245704308 1.0185469692899498 1.159879253726225 1.2127180647775455 1.2399539486734175 1.1851795717804683 1.08182566842239 1.014757597575836 1.0 13.884575986733152 -4.389866532843984 0.8900460743974125 1.0817161539583922 6.528459312962739e-14 0.43974435702036185 0.08818313596575542 7.929605168656467 1.499431095897339 0.01584881359252676 12.1199763312368 4.075054929403572e-05 4.389866532843984 -1.0817161539583269 WNSVS(ph)PASAGK ddPTM_A549_PD325901_60min_R1 2 WNSVSPASAGK 11 0 E5RJU9;Q86UE4;H0YB56;H0YBE0 E5RJU9 MTDH Protein LYRIC 1 WNS(0.205)VS(0.795)PASAGK;WNS(0.001)VS(0.975)PAS(0.024)AGK 192.4 2.4578000000000006e-19 78999000.0 22841.7 26859.0 29623.0 27075.0 31265.0 29214.0 30766.0 29309.0 32451.0 28133.0 25576.0 True False 25160.572568829186 29122.502191668693 31633.39491756995 28747.36125821359 29069.054258394593 28976.090869870834 31936.816965801183 28724.409002534303 31087.197321392316 26356.67757879218 22430.314139622085 1.121721809699679 1.298354628936078 1.4102965620838568 1.2816298995756257 1.2959717852121155 1.2918272427886306 1.4238238825815779 1.2806066301048364 1.385945695092975 1.1750471890286351 1.0 14.453162205256795 -10.80766093030273 0.9655370157311127 0.9928837372892677 1.317341211621485 0.42359340172305837 0.09238835038563312 0.25845641554832444 0.41223520492537913 0.05974821725541506 0.013620197794574374 1.5571809056234e-11 10.80766093030273 0.3244574743322174 WNSVS(ph)PASAGKR ddPTM_A549_MK2206_60min_R1 2 WNSVSPASAGKR 12 1 E5RJU9;Q86UE4;H0YB56;H0YBE0 E5RJU9 MTDH Protein LYRIC 1 WNS(0.016)VS(0.974)PAS(0.01)AGKR;WNS(0.001)VS(0.994)PAS(0.005)AGKR 71.344 0.0010661 17529300.0 5252.9 7001.799999999999 6807.4 6239.4 9862.8 6514.9 6906.3 6420.4 11481.0 9193.099999999999 10246.0 True False 6139.461098925218 7358.161712894171 7772.791682106647 7768.053280097305 8411.995185172154 7204.302393759378 8161.0853134048075 7330.511361650365 8880.571831389623 7116.372325114763 7701.635424785754 0.7971632984816347 0.955402496619588 1.009239110058611 1.0086238638481642 1.092234924299362 0.9354250099367419 1.0596561461661027 0.9518123044436743 1.153076111965747 0.9240079454050147 1.0 12.91094911601531 -4.284028172504025 0.7159465853606226 1.0560307937844966 1.906866664799924e-14 0.3593104262012907 0.07235679491422597 5.67212416989413 0.7298066093985398 0.011405067276603658 6.73676446115949 5.19962265701628e-05 4.284028172504025 -1.0560307937844775 WNSVS(ph)PASAGKR ddPTM_A549_PD325901_60min_R1 1 WNSVSPASAGKR 12 1 E5RJU9;Q86UE4;H0YB56;H0YBE0 E5RJU9 MTDH Protein LYRIC 1 WNS(0.01)VS(0.985)PAS(0.006)AGKR 53.828 0.009154700000000002 21170000.0 2133.2 2431.4 2448.1 3072.0 2982.5 2835.0 3058.8 3108.8 3181.6 2747.4 3266.6 True False 2349.7608936211595 2636.302610999043 2614.2427876212064 3261.7504629817968 2773.01948906643 2811.912699941255 3175.2043078395845 3046.792545193581 3047.8884163120338 2573.9286951257823 2864.8289086835107 0.8202098514500669 0.9202303854894135 0.9125301618177759 1.1385498286111213 0.9679529135793069 0.9815290160672903 1.1083399424710156 1.0635164061485574 1.0638989320003216 0.8984580849920957 1.0 11.484233266588674 -6.085639491987662 6.504800225839364 1.036602694345251 0.88097276652458 0.47247416977226464 0.06772904562482497 0.11518748444296248 7.255371868698504 0.007421625380475165 0.01999988018623047 8.210328011711531e-07 6.085639491987662 -0.1556299278206711 WNT(ph)IPLR ddPTM_A549_MK2206_60min_R1 2 WNTIPLR 7 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 WNT(1)IPLR;WNT(1)IPLR 81.594 0.016261 3530900.0 939.9 1466.38 973.8 1164.24 1821.67 1374.75 1098.1399999999999 1485.03 1705.58 2052.12 1685.19 True False 1098.5321416512425 1541.0124785846142 1111.899482920858 1449.4788522647189 1553.7047561516574 1520.2251325148063 1297.6578234456015 1695.5375502136374 1319.2688532515895 1588.5446667407618 1266.7108141220663 0.8672319912359907 1.2165463982816482 0.8777847875969188 1.1442855276082298 1.226566268188451 1.2001359075539637 1.0244309979661648 1.3385356241620017 1.0414917426642087 1.254070502146737 1.0 10.306871484238002 -3.953852040605589 15.913298929001733 1.065613079218244 1.0814277550695308 0.0 0.15497590991037372 0.0 0.0 0.01815520637934408 0.0 0.00011121105466848415 3.953852040605589 0.015814675851286708 WNT(ph)IPLR ddPTM_A549_PD325901_60min_R1 1 WNTIPLR 7 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 WNT(1)IPLR 69.954 0.022922 1349400.0 703.32 645.0 522.6 752.15 809.16 895.07 587.37 770.09 859.98 710.03 940.2 True False 774.7205286431812 699.3564136276965 558.0667786490924 798.6085972434105 752.3273930504583 887.7808466795126 609.7226867711965 754.7299508260816 823.838031261008 665.1985846255219 824.5613604188569 0.9395547327728796 0.8481556948926646 0.6768044264960562 0.9685253706743389 0.9123970988263318 1.0766704447908422 0.7394509566413255 0.9153108392596729 0.99912277097549 0.8067302405337273 1.0 9.68748304678265 -7.932296697985858 0.3967468113326808 1.011775784953821 0.8382645477074643 0.0 0.12001429367852938 1.2920435207959804 0.4640098639085931 0.042818062162541144 0.08133782526260334 1.1687006942164954e-08 7.932296697985858 -0.17351123724635664 WNT(ph)LNKK ddPTM_A549_MK2206_60min_R1 1 WNTLNKK 7 1 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;A0A0A6YYJ5 H3BPE1;Q9UPN3;A0A0A6YYJ5 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 WNT(1)LNKK 44.309 0.050121 15999000.0 3411.5 4422.4 3931.7 4042.3 5367.2 4628.0 5225.8 4163.4 6280.5 5311.9 5577.1 True False 3987.2777968328683 4647.481270402353 4489.274180529823 5032.663681465742 4577.6919898868455 5117.731888182228 6175.260216149148 4753.574699877751 4857.976777897615 4111.9381007252305 4192.15214987045 0.9511290750637682 1.108614645712698 1.0708757745513973 1.200496427979425 1.0919670437124545 1.2207886797096288 1.4730525027198695 1.1339222742725716 1.1588264462318576 0.9808656636788105 1.0 12.033475363627181 -4.294745475983925 16.334915993969577 1.1163401863762228 1.1141497462664396 0.0 0.13792405448277092 0.0 0.0 0.018593385287975044 0.0 5.072879239592956e-05 4.294745475983925 -0.0021904401097831983 WNT(ph)LNKK ddPTM_A549_PD325901_60min_R1 2 WNTLNKK 7 1 H3BPE1;H3BQK9;Q9UPN3;H0Y390;A0A590UJG2;Q9UPN3-4;Q9UPN3-3;Q9UPN3-2;Q9UPN3-5;A0A0A6YYJ5 H3BPE1;Q9UPN3;A0A0A6YYJ5 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 WNT(1)LNKK;WNT(1)LNKK 51.927 0.029991000000000004 57128000.0 10362.9 9608.5 10732.0 10269.8 11880.2 10896.1 11163.4 11219.6 13965.1 10519.3 12343.7 True False 11414.933979236233 10418.24201603368 11460.338056758626 10904.142221591945 11045.775736465044 10807.365774190444 11588.22929584688 10995.816276394076 13378.195411943416 9855.109602765031 10825.50315316129 1.0544483538303544 0.9623794726798746 1.0586425309397236 1.0072642414230595 1.0203475607726769 0.9983245694251589 1.0704564149947025 1.0157325826636567 1.23580356706438 0.9103604205119203 1.0 13.402146460362978 WNTRES(ph)YDDVSSFR ddPTM_A549_MK2206_60min_R1 2 WNTRESYDDVSSFR 14 1 H7C2Q8;Q99848 H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 1 WNT(0.03)RES(0.97)YDDVSSFR;WNTRES(1)YDDVSSFR 98.165 1.1082e-05 4829000.0 1186.59 1978.0500000000002 1805.1799999999998 1698.54 2643.8 1866.68 2056.45 1863.82 3066.3 2407.5 2643.3 True False 1386.857382659801 2078.724296065343 2061.1816682882263 2114.6823762503586 2254.9005222206824 2064.210838598101 2430.0803458800406 2128.022192709361 2371.7879458749235 1863.644077918634 1986.8956586312881 0.6980021203605452 1.0462171413154693 1.037387977236868 1.0643147600952023 1.134886229392647 1.0389125516636706 1.22305383039291 1.0710286589358653 1.193715399986719 0.9379677638444495 1.0 10.956300396440547 -4.830917686880903 1.4461590945383547 1.0975661540024757 1.9414811058425323e-12 0.6429879435204042 0.07990243951498523 1.5804974444112991 1.2747840272273547 0.01115456156915384 3.397951728480661 1.4759862548120885e-05 4.830917686880903 -1.0975661540005341 WNTRES(ph)YDDVSSFR ddPTM_A549_PD325901_60min_R1 2 WNTRESYDDVSSFR 14 1 H7C2Q8;Q99848 H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 1 WNT(0.003)RES(0.997)YDDVSSFR;WNT(0.18)RES(0.818)Y(0.002)DDVSSFR 87.676 2.2111e-05 7364600.0 2591.0 2357.6 2376.9700000000003 2431.3 3064.1000000000004 2727.7 2313.65 2344.1 3393.8 2428.6 2574.4 True False 2854.0364126066115 2556.2832259979186 2538.2854780817706 2581.4758791170725 2848.8881865711455 2705.4865155660523 2401.69721682786 2297.3450865891236 3251.1703882574134 2275.2577815325308 2257.765120466183 1.264098017431198 1.1322184060803002 1.1242469179246006 1.143376631925313 1.2618177864236417 1.1983029107152758 1.0637498095160394 1.0175305950845623 1.439994957308098 1.0077477771747736 1.0 11.140679692312359 WPCT(ph)SPR ddPTM_A549_PD325901_60min_R1 2 WPCTSPR 7 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 WPCT(0.5)S(0.5)PR;WPCT(0.575)S(0.425)PR 58.596000000000004 0.034292 15658000.0 6102.799999999999 6203.9 6444.1 6179.5 6412.6 5951.1 6000.6 6695.200000000001 5680.1 5786.6 6656.4 True False 6722.351763356091 6726.724425588943 6881.435377521268 6561.193680337243 5962.201098269032 5902.636214680918 6228.956116654312 6561.658983717205 5441.3851500798255 5421.233088452668 5837.70499839617 1.1515401626500426 1.1522892005397702 1.1787912166530938 1.1239337517294625 1.021326206087335 1.0111227299602477 1.0670213925447813 1.1240134582888193 0.932110333011821 0.9286582809412395 1.0 12.511185592435421 -6.970625638333802 0.49521729660477337 0.9721891914050231 1.1914578588215907 0.6302666255409002 0.051935458396092524 0.636435642491929 0.2567931414353956 0.013896016909207966 0.061454739912379736 1.0699768013835256e-07 6.970625638333802 0.2192686674165676 WPFSGKTS(ph)PPCSPANLSR ddPTM_A549_PD325901_60min_R1 1 WPFSGKTSPPCSPANLSR 18 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 WPFS(0.15)GKT(0.12)S(0.723)PPCS(0.003)PANLS(0.004)R 41.482 0.024435 4642100.0 2500.6 2977.6 3701.8 2970.4 2852.3 3631.5 3321.8 3822.1 3152.6 3636.1 3176.5 True False 2754.4590711555757 3228.532801888109 3953.0264087317423 3153.874861732139 2651.9642879008143 3601.926268019989 3448.2129167587063 3745.865217120556 3020.1071854618185 3406.5160254592906 2785.810637492554 0.9887459808233063 1.1589204084574964 1.4189860414524704 1.132121049179018 0.9519542542517492 1.2929544526622967 1.2377772093879165 1.3446230575428217 1.0841035441591067 1.2228096122590082 1.0 11.443881480277064 -8.96661777281467 10.269469487123958 1.0369769334141308 1.1937835604636657 0.027506190880920323 0.14355370832265074 0.44035191092552817 130.95075964664866 0.023425322623071766 0.024555758590830742 1.0798967326933076e-09 8.96661777281467 0.15680662704953496 WPQGAVPQLPPS(ph)APATSEMTTTPERPR ddPTM_A549_MK2206_60min_R1 1 WPQGAVPQLPPSAPATSEMTTTPERPR 27 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 WPQGAVPQLPPS(0.236)APAT(0.236)S(0.132)EMT(0.132)T(0.132)T(0.132)PERPR 52.236999999999995 0.0027641 4718300.0 1237.1 1888.8 1676.9 1758.2 2591.8 1621.4 1700.2 1440.2 2754.6 2072.8 2262.0 True False 1445.892235808865 1984.9318522829133 1914.7096353563227 2188.959078928598 2210.5496533367 1792.975471801787 2009.1043322547314 1644.35276042752 2130.687498192303 1604.553040377879 1700.282971975928 0.850383294804493 1.167412651304853 1.1261123394838248 1.2874086931452189 1.30010691736081 1.0545159254980596 1.181629390736012 0.9671053510090674 1.253136997376498 0.9436976472882043 1.0 10.731559153550565 -11.109793693023539 1.4532200261905888 0.9999876276357296 1.1521957659333744 0.1575378168910485 0.13181980837661367 0.6324776700331503 2.388470665246325 0.09261600507989812 0.02009557931458529 7.76615952167602e-12 11.109793693023539 0.1522081382976448 WPQGAVPQLPPS(ph)APATSEMTTTPERPR ddPTM_A549_PD325901_60min_R1 1 WPQGAVPQLPPSAPATSEMTTTPERPR 27 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 WPQGAVPQLPPS(0.17)APAT(0.151)S(0.17)EMT(0.17)T(0.17)T(0.17)PERPR 49.199 0.0028734999999999998 5935200.0 2813.8 2245.9 2446.7 2389.1 3424.2 2791.7 2827.2 2994.5 2416.1 2856.9 3806.9 True False 3099.454904589921 2435.1698749867346 2612.747775202323 2536.6692809602237 3183.696004848704 2768.965320785185 2934.790643103202 2934.7723483601944 2314.5597192140776 2676.5148464383974 3338.675433927403 0.928348671779671 0.7293820328387409 0.7825701620024964 0.7597831329103617 0.9535805644646352 0.8293604381687238 0.8790284354328216 0.8790229557917575 0.6932568813648886 0.8016696739191319 1.0 11.70506013468999 -11.081464988600835 1.414636086607648 0.999668318439519 0.8100601235336349 0.0 0.09711238664278984 0.3385966656003566 1.21354060719733 0.060177065880287636 0.013328780714925869 8.289627418414991e-12 11.081464988600835 -0.1896081949058841 WPQGAVPQLPPSAPATS(ph)EMTTTPERPR ddPTM_A549_MK2206_60min_R1 1 WPQGAVPQLPPSAPATSEMTTTPERPR 27 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 WPQGAVPQLPPS(0.129)APAT(0.161)S(0.178)EMT(0.178)T(0.178)T(0.178)PERPR 40.764 0.02416 4518500.0 302.71 482.71 606.14 486.65 986.7 558.62 650.19 514.99 924.72 935.13 746.35 True False 353.8000474510558 507.27787717888924 692.0997664588718 605.8792718465488 841.5577370735859 617.7327976180549 768.3211068043191 587.9914095907296 715.2723964744018 723.8834835240089 561.0106967879022 0.6306475963413131 0.9042213991343423 1.2336659005283275 1.0799781097143852 1.5000743156805587 1.1011069862926288 1.369530226791368 1.0480930452080628 1.274971048804833 1.2903202874181254 1.0 9.131884468729535 -5.485043389869545 2.6990781181063532 1.1675187890323202 0.6244114153079837 0.5840425310036511 0.1479767402838654 0.1842962496030571 2.302108697046237 0.021192526331549097 0.17567463406604847 3.2730799227462236e-06 5.485043389869545 -0.5431073737243365 WPQGAVPQLPPSAPATS(ph)EMTTTPERPR ddPTM_A549_PD325901_60min_R1 1 WPQGAVPQLPPSAPATSEMTTTPERPR 27 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 WPQGAVPQLPPS(0.033)APAT(0.181)S(0.202)EMT(0.202)T(0.202)T(0.181)PERPR 48.20399999999999 0.0031215999999999995 3174000.0 3623.9 3903.3 4353.4 4253.2 5340.8 5517.6 5558.9 5901.9 4957.6 4343.1 4771.8 True False 3991.7956602258205 4232.244789632542 4648.8479031208535 4515.9105042819565 4965.6806327597615 5472.666494954451 5770.446981446799 5784.181974549017 4749.249312518398 4068.875924801916 4184.898850932464 0.9538571426490711 1.011313520442562 1.110862668063056 1.0790966914948823 1.1865712433296511 1.307717746567531 1.378873704477003 1.382155741532488 1.1348540267491025 0.9722758111334768 1.0 12.030977037898484 -5.644877033077818 1.5515634214182645 1.1375642149162697 0.9379105427339542 0.20328527303328037 0.1344222441603304 0.9520137206504478 3.4321127446046997 0.022893672853825174 0.23146411562084118 2.265285613849102e-06 5.644877033077818 -0.19965367218231544 WPQGAVPQLPPSAPATSEMT(ph)TTPERPR ddPTM_A549_MK2206_60min_R1 1 WPQGAVPQLPPSAPATSEMTTTPERPR 27 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 WPQGAVPQLPPS(0.037)APAT(0.037)S(0.037)EMT(0.297)T(0.297)T(0.297)PERPR 48.983999999999995 0.0029757 5512900.0 1142.3 1810.6 1571.7 1794.1 2144.0 1423.4 1711.1 1503.8 2397.9 1859.0 2123.5 True False 1335.0923134463394 1902.7518063021203 1794.5906934757782 2233.6545805402106 1828.6204401396255 1574.0232432235493 2021.9847211628453 1716.9682551943515 1854.7794786594525 1439.0506088684276 1596.1763443814702 0.8364315873655535 1.19206866647272 1.124306032847013 1.3993783258364023 1.145625573625594 0.9861211442984357 1.2667677529993584 1.0756757931152583 1.1620141378415132 0.9015611676829292 1.0 10.640404332908147 -10.793646565073095 0.7983367138337857 0.9896617783020936 1.1417373059143054 0.1776212134771028 0.14070966475538477 1.2901109102937387 1.2918938975938594 0.12756685003387547 0.024473144090905712 1.6082495365696995e-11 10.793646565073095 0.15207552761221188 WPQGAVPQLPPSAPATSEMTTT(ph)PERPR ddPTM_A549_MK2206_60min_R1 1 WPQGAVPQLPPSAPATSEMTTTPERPR 27 1 P27708;F8VPD4;H7BZB3 P27708;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 WPQGAVPQLPPS(0.059)APAT(0.19)S(0.19)EMT(0.19)T(0.158)T(0.213)PERPR 40.799 0.024434 5232200.0 735.77 737.56 765.53 1252.2 1416.9 1091.8 952.71 998.2 1399.0 1328.8 1250.2 True False 859.9499881505849 775.0986536265282 874.0936651883393 1558.9890562133937 1208.4758869560799 1207.333551321815 1125.8050749220129 1139.6979068592907 1082.128733743932 1028.6231571083194 939.7408362353257 0.9150927095981174 0.8248004383119427 0.9301433240786109 1.6589563804195466 1.285967194739911 1.284751608920696 1.1979952679635322 1.2127789523598957 1.1515182612251087 1.0945817372681848 1.0 9.87611913185221 -6.023774355790347 24.971434265138075 1.1589529239403122 0.871827721075829 0.40309067442069946 0.17054226803522893 676.4540278820709 710515.6343675299 0.026978650623049345 0.07185399750284897 9.467289208097906e-07 6.023774355790347 -0.2871252028644833 WPRT(ph)PKEEAQSLEDLAGFK ddPTM_A549_PD325901_60min_R1 1 WPRTPKEEAQSLEDLAGFK 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 WPRT(1)PKEEAQSLEDLAGFK 215.07 7.992799999999998e-67 34274000.0 7477.6 8088.5 9111.1 8714.4 10631.0 8722.1 8969.6 9050.9 10339.0 8644.2 9497.2 True False 8236.720447281827 8770.146281593221 9729.434035495113 9252.668696161649 9884.315234959 8651.070109403036 9310.94303635345 8870.37269920631 9904.487784840996 8098.403736771604 8329.104607711093 0.9889082722837054 1.0529518711379626 1.1681248457952602 1.1108839583543613 1.1867200258006234 1.0386554758111535 1.1178804295162015 1.064985147502423 1.1891419607902884 0.9723018401370651 1.0 13.02394569652584 -5.518985587705491 8.126217936114108 1.1001212607938982 1.0042933761211734 0.16527910477943664 0.06881720872866012 0.14685728770471632 87.50150305645788 0.01002824131029748 0.04449836956246412 3.027013879508035e-06 5.518985587705491 -0.09582788467272474 WPT(ph)GDNIHAEHQVR ddPTM_A549_MK2206_60min_R1 2 WPTGDNIHAEHQVR 14 0 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 WPT(1)GDNIHAEHQVR;WPT(1)GDNIHAEHQVR 104.44 1.1277e-05 23956000.0 963.81 984.9100000000001 1037.25 849.98 1337.3400000000001 1173.6 1028.42 1232.75 1445.26 1352.57 1265.9499999999998 True False 1126.477565107867 1035.037712109257 1184.3476470113587 1058.2251381570522 1140.6190575635858 1297.7895730273694 1215.2706019158986 1407.496087638541 1117.9109176059721 1047.0234975993376 951.5796765574394 1.1837974190276543 1.0877047267904527 1.244612170886217 1.1120720253141887 1.1986584893133072 1.3638264929348058 1.27710861408098 1.4791153303425786 1.174794864945282 1.1003003987928666 1.0 9.894180649386762 -9.89764250012694 1.1127940454344312 1.0275476427806693 1.2356365775387572 0.2948305213959743 0.10855356073847629 0.33958104494984054 0.852479635329539 0.036043820432265145 0.021566826138657184 1.2657778740154316e-10 9.89764250012694 0.20808893475808787 WPT(ph)GDNIHAEHQVR ddPTM_A549_PD325901_60min_R1 2 WPTGDNIHAEHQVR 14 0 Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PR38;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 WPT(1)GDNIHAEHQVR;WPT(1)GDNIHAEHQVR 142.39 2.8523000000000004e-13 28203000.0 1299.54 1480.03 2094.8999999999996 1970.04 1663.01 1551.3899999999999 1456.6399999999999 1415.83 1750.9 1676.93 2050.7200000000003 True False 1431.4683441292148 1604.7573222657363 2237.0725116570657 2091.724896514537 1546.2059146730471 1538.755994201715 1512.073232303992 1387.5901599528518 1677.3157619187643 1571.0483536133358 1798.4944405851504 0.7959259210517651 0.8922781667001536 1.243858452478297 1.163042180899921 0.8597223765506777 0.8555800671260747 0.8407439012221969 0.7715287457332319 0.9326221555475257 0.8735352849365419 1.0 10.812573984556492 -5.522149009326314 24.999995733421912 0.9615706365487654 0.8200138972059662 0.09211774258417194 0.13592931571146688 37.6936880692362 1291238.072415165 0.019277490159661657 0.07654128572579347 3.005045074768596e-06 5.522149009326314 -0.14155673934279922 WQRPS(ph)SPPPFLPAASEEAEPAEGLR ddPTM_A549_MK2206_60min_R1 2 WQRPSSPPPFLPAASEEAEPAEGLR 25 1 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR 179.66 3.0851000000000002e-49 25476000.0 1929.44 2016.08 2319.5 2273.2 3098.3999999999996 2271.3 2479.34 2201.69 3245.7 2731.2 3088.3 True False 2255.0823017210046 2118.6898606260793 2648.439978060107 2830.1341020478258 2642.6294644256623 2511.6474584330817 2929.8039849032143 2513.786299892841 2510.5541323178527 2114.2200230992203 2321.3898772560824 0.9714362605847776 0.9126816143139224 1.1408854686618186 1.2191550113042995 1.1383824364519457 1.0819584779967624 1.2620904457317124 1.0828798404446278 1.0814874988967236 0.9107561137460718 1.0 11.180773128218041 -3.948032861519569 15.87594443365034 1.069606131487662 1.0861725030678258 0.0 0.11038647427959906 0.0 0.0 0.013949979171589107 0.0 0.00011271121683778369 3.948032861519569 0.01656637158016383 WQRPS(ph)SPPPFLPAASEEAEPAEGLR ddPTM_A549_PD325901_60min_R1 3 WQRPSSPPPFLPAASEEAEPAEGLR 25 1 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.57)S(0.43)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR 94.185 4.1714e-09 36315500.0 5074.6 5054.0 5553.3 5664.7 6373.6 6706.799999999999 6863.6 7173.700000000001 6408.700000000001 6596.0 6544.7 True False 5589.769656276923 5479.918317014546 5930.180332705712 6014.595653532875 5925.9403237263305 6652.182044432449 7124.798053906031 7030.614925841217 6139.364625854578 6179.527434319601 5739.743390271527 0.9738710036673768 0.9547322840778272 1.0331786509405565 1.0478858103181414 1.0324399403935713 1.158968544779797 1.241309509756495 1.224900565721741 1.0696235368745548 1.076620854652401 1.0 12.486770523678352 -6.01166996882532 1.5464957455358948 1.0733041610046055 0.958750257141884 0.27569145592134114 0.07775234453180022 0.6472284141873844 2.7772521577526583 0.014034214014649328 0.07250127690771413 9.734867195227823e-07 6.01166996882532 -0.11455390386272146 WQRPS(ph)SPPPFLPAASEEAEPAEGLRVPGLAK ddPTM_A549_MK2206_60min_R1 2 WQRPSSPPPFLPAASEEAEPAEGLRVPGLAK 31 2 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.499)S(0.499)PPPFLPAAS(0.003)EEAEPAEGLRVPGLAK;WQRPS(0.541)S(0.459)PPPFLPAASEEAEPAEGLRVPGLAK 96.042 3.9172000000000007e-10 6603700.0 2362.09 2834.98 3728.95 2836.81 4053.2799999999997 2844.8 3464.1899999999996 2800.7000000000003 5316.200000000001 4424.5 4304.0 True False 2760.75304444407 2979.268372821375 4257.77118180092 3531.8285773492403 3457.047881347548 3145.8348477745913 4093.588481798329 3197.7078017840286 4112.0891882269425 3425.0023770512935 3235.198015642968 0.8533490163801901 0.9208921241963827 1.3160774583854102 1.0916885335215931 1.0685738136064258 0.9723778367085154 1.2653285709266742 0.988411771496624 1.2710471409613855 1.058668545322597 1.0 11.659638302117369 -5.581554434452086 10.212774599561088 1.1228523400935508 0.8701406358157995 0.3747170986893845 0.11430848864440402 0.28733476596128327 48.13095214491055 0.01689255276876615 0.06562151904318847 2.6208705182468374e-06 5.581554434452086 -0.25271170427775136 WQRPS(ph)SPPPFLPAASEEAEPAEGLRVPGLAK ddPTM_A549_PD325901_60min_R1 2 WQRPSSPPPFLPAASEEAEPAEGLRVPGLAK 31 2 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLRVPGLAK;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLRVPGLAK 86.081 2.0018e-07 14470300.0 4017.6000000000004 3957.1 4559.9 4151.3 5059.0 5202.1 4453.4 4877.8 4634.2 4917.2 4399.3 True False 4425.463794399199 4290.578704443658 4869.362234906231 4407.716372713653 4703.673292602533 5159.73582235076 4622.876573993989 4780.508452439928 4439.440689864603 4606.7271528254 3858.2139894604106 1.1470239355536942 1.1120634356114902 1.2620767661430914 1.142424029552102 1.2191322994141038 1.337337907240436 1.1981908174669493 1.2390469957081112 1.150646569109942 1.1940050928770989 1.0 11.913717446963519 -9.917266964845124 0.7656844571004753 1.0118700779557066 1.2070777579070264 0.06674583526563582 0.08101921688379318 0.300368256162339 0.3609579046913104 0.028278647526891243 0.013346379426803438 1.2098541963282112e-10 9.917266964845124 0.19520767995131982 WQRPSS(ph)PPPFLPAASEEAEPAEGLR ddPTM_A549_PD325901_60min_R1 1 WQRPSSPPPFLPAASEEAEPAEGLR 25 1 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.24)S(0.76)PPPFLPAASEEAEPAEGLR 124.48 5.5687e-18 23098000.0 2134.9 2093.3 2026.6 1742.0 2622.3 2725.2 2166.5 2561.8 1937.7 2525.3 3057.8 True False 2351.6334763696855 2269.7097374369887 2164.1372629358016 1849.599383630954 2438.118694443888 2703.0068747371793 2248.9473430542903 2510.7028893067786 1856.2652075332626 2365.852127029607 2681.709984991256 0.8769156581178009 0.8463665907722641 0.8069989950620473 0.6897089521173502 0.9091656846151609 1.0079415335234294 0.838624368645748 0.9362320695968043 0.6921946138554259 0.8822177417657342 1.0 11.388937509287656 WQS(ph)PVTK ddPTM_A549_MK2206_60min_R1 1 WQSPVTK 7 0 A9Z1X7;M0R088 A9Z1X7 SRRM1 1 WQS(0.904)PVT(0.096)K 107.79 0.009145100000000001 241190000.0 3356.2 4225.0 4270.8 4143.9 6377.4 4773.7 4505.9 4796.4 6569.5 5792.5 5620.1 True False 3922.644508788063 4440.034453565921 4876.463659538308 5159.15568602674 5439.292908090696 5278.849765474401 5324.563704685679 5476.304388358948 5081.518739335778 4483.970226934034 4224.474063130822 0.9285521582492404 1.0510265626475035 1.154336276342122 1.221253961777957 1.2875668844939132 1.249587448422435 1.2604086627388507 1.2963280887799735 1.2028760653745822 1.0614268569117207 1.0 12.044556025170914 -4.1457833155003385 11.482616681972166 1.1399920021280778 1.1453851227249234 0.0 0.12131335132240784 0.0 0.0 0.01833451439509865 0.0 7.148529018884509e-05 4.1457833155003385 0.005393120596845602 WQS(ph)PVTK ddPTM_A549_PD325901_60min_R1 2 WQSPVTK 7 0 A9Z1X7;M0R088 A9Z1X7 SRRM1 1 WQS(0.926)PVT(0.074)K;WQS(0.997)PVT(0.003)K 142.55 0.0049456000000000005 616190000.0 16057.0 16844.199999999997 19069.199999999997 18736.0 20036.6 19505.3 19051.2 18730.1 24799.0 18440.5 18910.0 True False 17687.09481946136 18263.719848725035 20363.350584414962 19893.280167456698 18629.298338517474 19346.45530376161 19776.203841216644 18356.51346202079 23756.78427084554 17276.16368292459 16584.18988036649 1.066503395526155 1.1012729581893468 1.2278773175723525 1.1995328268043852 1.1233167536613966 1.1665601662379226 1.192473312466657 1.1068682639573788 1.432495915822241 1.0417249083343711 1.0 14.017520919313398 WQSPVT(ph)K ddPTM_A549_MK2206_60min_R1 1 WQSPVTK 7 0 A9Z1X7;M0R088 A9Z1X7 SRRM1 1 WQS(0.058)PVT(0.942)K 111.95 0.0084422 233860000.0 5762.1 6399.9 5945.9 6332.2 7139.4 5717.8 6534.4 6963.0 8924.2 7802.7 8979.5 True False 6734.601610180465 6725.627573816932 6789.118027828235 7883.589284263257 6089.203717505994 6322.8538008315345 7721.615897356375 7950.026573293171 6902.882949019011 6040.0646507895035 6749.642328407542 0.9977716273699757 0.9964420700502103 1.0058485616718609 1.168001043712082 0.9021520580250707 0.9367687194653616 1.1440037148128637 1.1778441266189046 1.0227035171873504 0.8948718105207435 1.0 12.720595338721187 -6.0197196092414 24.918361624225067 1.0298205228209119 0.998116418229884 0.021018824148226978 0.09446236027899119 2734.824815098351 3455831.614965337 0.012144016414941932 0.03264265067507987 9.55609350832148e-07 6.0197196092414 -0.031704104591027904 WRLS(ph)PGETPER ddPTM_A549_MK2206_60min_R1 2 WRLSPGETPER 11 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 WRLS(0.986)PGET(0.014)PER;WRLS(0.998)PGET(0.002)PER 75.764 0.00035984 13157400.0 842.54 1154.3000000000002 996.6099999999999 877.5699999999999 1339.5700000000002 1098.29 1224.23 1083.05 1759.08 1588.89 1512.81 True False 984.7401538747074 1213.0489395860702 1137.9442839122585 1092.5746893956136 1142.5210275176485 1214.5103188141018 1446.6567443102044 1236.575654201518 1360.651188673534 1229.9586454679702 1137.1375255680396 0.8659815824676049 1.0667565816017814 1.000709464181842 0.9608113924917171 1.0047342575797238 1.0680417201142067 1.272191543927415 1.0874460005035942 1.1965581630012971 1.081626995691276 1.0 10.15119102917968 -7.304407751152723 3.74687035324891 1.1088624798533429 0.9834969994186303 0.4293767859740173 0.07967694718555346 0.23990160426752793 7.112063490001179 0.014286855275928408 0.0239178628171843 4.96126298798808e-08 7.304407751152723 -0.12536548043471252 WRLS(ph)PGETPER ddPTM_A549_PD325901_60min_R1 2 WRLSPGETPER 11 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 WRLS(0.755)PGET(0.245)PER;WRLS(1)PGETPER 109.83 2.6389e-05 23209000.0 1912.9699999999998 2333.6 2152.42 2168.71 2683.8 2549.69 2633.87 2165.51 2173.4 2303.63 2183.99 True False 2107.1733061459176 2530.2606617699125 2298.4961647529267 2302.66629120223 2495.2991466073718 2528.9261699870253 2734.1033641589684 2122.3172042402684 2082.0595562020917 2158.1784086600437 1915.3730754532844 1.1001372699400833 1.3210275816219832 1.2000253079724292 1.2022024955411312 1.302774471765426 1.3203308548067274 1.42745212366104 1.108043770396015 1.0870255945878116 1.1267666003654657 1.0 10.90340971163448 -8.469825493898945 6.655168917290933 1.0437459837241796 1.268541137183489 0.5233645315252438 0.08531564130976733 0.11619060265339455 11.784904799085767 0.013796305660102356 0.016596785167698882 3.3898033621136215e-09 8.469825493898945 0.22479515345930934 WRPHS(ph)PDGPR ddPTM_A549_MK2206_60min_R1 6 WRPHSPDGPR 10 1 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9IYH5;C9JH78 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR 128.54 4.0305999999999996e-07 1473909500.0 7991.2699999999995 9517.069999999998 8935.63 7544.8099999999995 10938.66 9273.15 8593.53 8140.039999999999 11409.699999999999 12582.839999999998 12149.55 True False 9340.001008206538 10001.448212307369 10202.836698061321 9393.288788699385 9329.597604355286 10254.428577981207 10154.863164545939 9293.915597826988 8825.421167546916 9740.367704838087 9132.481424478403 1.0227232418093846 1.0951512242335162 1.117203115323506 1.0285582145857886 1.0215840767382827 1.1228523882343273 1.1119500486830642 1.0176769232638 0.9663771276765531 1.066563100662907 1.0 13.156791198802061 -8.478181068203043 5.156056862524275 0.9843539037238055 1.0746018376800275 0.264914663117472 0.0436292224413304 0.11302465110269469 7.1134567256501375 0.006195723189823515 0.00740593886039594 3.3252088813648707e-09 8.478181068203043 0.09024793395622199 WRPHS(ph)PDGPR ddPTM_A549_PD325901_60min_R1 6 WRPHSPDGPR 10 1 Q6Y7W6;Q6Y7W6-3;I1E4Y6;C9IYH5;C9JH78 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR 152.4 6.1897999999999994e-09 1733139200.0 14763.64 14792.01 16004.569999999998 15778.23 16900.85 17416.87 15435.0 15653.939999999999 19665.82 18727.54 18836.649999999998 True False 16262.433864382667 16038.584595263614 17090.7363634977 16752.81543213975 15713.792600767256 17275.03278526485 16022.387371356082 15341.709886421633 18839.33397513122 17545.079928338022 16519.861465362534 0.9844170847606912 0.9708667732409245 1.0345568816864554 1.0141014479610289 0.951206076014295 1.0457129329737842 0.9698863035232158 0.9286827204083309 1.1404050823689995 1.062059749418909 1.0 14.011913967997335 -8.755363598088877 24.999955489167906 1.0663023998841628 0.9894873757245736 0.39208798696716385 0.04433648807468913 143.3510837767611 589844.0429573469 0.009812230162532964 0.010989994932553503 1.7564524689108806e-09 8.755363598088877 -0.07681502415958918 WRPHS(ph)PGWR ddPTM_A549_MK2206_60min_R1 1 WRPHSPGWR 9 1 Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 WRPHS(1)PGWR 86.014 0.00034219999999999997 11390000.0 1348.1 1081.1 1071.1 698.63 2298.1 1603.6 1178.7 1553.9 2514.0 1731.3 1675.0 True False 1575.6263221194156 1136.1233722485488 1222.9980860099931 869.7943813626927 1960.0525342746605 1773.2918876164713 1392.8545326600708 1774.170083619167 1944.583014033055 1340.1981275599296 1259.05127235176 1.2514393628913385 0.9023646591662655 0.9713647989295752 0.6908331697548892 1.5567694321244856 1.408435007022526 1.1062730829526761 1.4091325131701948 1.5444827837716268 1.064450794808854 1.0 10.298121319793243 -6.760990973064798 24.999995287757603 1.291660777520471 0.9515525607966504 0.37948300938932855 0.21179223001291086 11.739075903367068 654415.3685324967 0.035437772829412545 0.07037301620213422 1.7338400357413756e-07 6.760990973064798 -0.3401082167238205 WRPHS(ph)PGWR ddPTM_A549_PD325901_60min_R1 2 WRPHSPGWR 9 1 Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 WRPHS(1)PGWR;WRPHS(1)PGWR 83.045 0.00040838 18032000.0 2928.4 3573.2 3533.2 3777.6000000000004 3114.1 3132.0 2581.5 2763.3 4987.9 4365.9 5189.6 True False 3225.68901222586 3874.326104146491 3772.98419885758 4010.9337724479315 2895.3763590617823 3106.494030411291 2679.7403951510046 2708.1838137330874 4778.275908889487 4090.2363289108457 4551.312099584877 0.7087382586924931 0.8512547633241558 0.8289882381833829 0.8812697711531949 0.6361629999678265 0.6825491116495028 0.588784143235403 0.5950336418326706 1.0498677753444576 0.8986938797899433 1.0 12.152066805067266 -8.774249898362335 24.99562028687847 1.0235487027152268 0.7262450604839288 0.5588551874552423 0.10157613677501943 102.75656144749514 200495.8139348483 0.017987276854269672 0.019208540633862615 1.6817061083259126e-09 8.774249898362335 -0.297303642231298 WRS(ph)LQQLAEER ddPTM_A549_MK2206_60min_R1 4 WRSLQQLAEER 11 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 WRS(1)LQQLAEER;WRS(1)LQQLAEER;WRS(1)LQQLAEER;WRS(1)LQQLAEER 121.45 2.8588e-06 37727900.0 1497.65 1511.21 1590.51 1233.22 2490.8500000000004 1838.22 1845.74 1830.0 2634.0299999999997 2308.1200000000003 2031.75 True False 1750.4167059729577 1588.1241341002021 1816.0682343196283 1535.35895536135 2124.449264609044 2032.7392202883184 2181.0870663544565 2089.4081041399545 2037.4264106815783 1786.7140889410416 1527.2104015526488 1.146152949320791 1.0398856192215722 1.1891408233425533 1.005335580349909 1.3910652143602533 1.331014520475843 1.4281510027282682 1.368120661053476 1.3340836394318785 1.1699200628312685 1.0 10.576683118483915 -6.7384564231475474 24.993862778451117 1.224920160224416 1.0978980052060971 0.2616216064730261 0.13100563653365246 447.3805765579897 486521.68084708945 0.025254114284241354 0.05254394716628782 1.826179977705369e-07 6.7384564231475474 -0.12702215501831882 WRS(ph)LQQLAEER ddPTM_A549_PD325901_60min_R1 3 WRSLQQLAEER 11 1 A0A0D9SF54;A0A0D9SGF6;Q13813-3;Q13813;Q13813-2 A0A0D9SF54 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 WRS(1)LQQLAEER;WRS(1)LQQLAEER;WRS(1)LQQLAEER 105.46 4.8797e-05 65181300.0 3347.1499999999996 3378.83 3729.02 3656.42 4230.030000000001 3721.05 3514.9700000000003 4260.33 4621.83 4209.27 4215.55 True False 3686.950203958402 3663.5758621049185 3982.0937216188986 3882.2687590676783 3932.9272856112875 3690.7470025101948 3648.7341068153883 4175.354375985772 4427.590557946772 3943.495973841487 3697.0640745731876 0.9972643507359409 0.9909419442582598 1.0770962150767205 1.0500950702391794 1.0637974366363476 0.9982913274058627 0.986927473589059 1.1293703035070608 1.1975963815173858 1.06665610719683 1.0 11.85216433204657 -8.265396857994865 24.93308656085359 1.0986211444230216 1.0259024402510255 0.318690624737733 0.052618195825929276 460.6472492897831 2902187.045509309 0.012520772293595796 0.015429868048282412 5.427541364640178e-09 8.265396857994865 -0.0727187041719961 WRS(ph)PIR ddPTM_A549_MK2206_60min_R1 2 WRSPIR 6 1 A0A0A0MRY4;Q96N96-6 A0A0A0MRY4 SPATA13 Spermatogenesis-associated protein 13 1 WRS(1)PIR;WRS(1)PIR 63.48 0.016693 10002000.0 704.9100000000001 1087.28 962.76 825.12 1514.97 951.88 886.27 1042.0 1371.48 1001.21 1340.98 True False 823.8815746051459 1142.617907851635 1099.2938449136232 1027.2744370410444 1292.119919868623 1052.607309793194 1047.2937869353023 1189.7066909911653 1060.841969803522 775.0359656294563 1007.9776568347837 0.8173609494403578 1.1335746383899459 1.0905934645075244 1.0191440555010474 1.2818934141120675 1.0442764307877168 1.0390049618996295 1.180290736529856 1.0524459174370402 0.7689019298931657 1.0 9.977247944600203 -9.661903655538936 1.261754451258114 1.0110644835732265 1.080737358430248 0.1193843929045284 0.1311235422416857 0.8030821637784691 2.6074247523648637 0.027330901670146228 0.019497282838346213 2.1781929319536846e-10 9.661903655538936 0.06967287485702145 WRS(ph)PIR ddPTM_A549_PD325901_60min_R1 2 WRSPIR 6 1 A0A0A0MRY4;Q96N96-6 A0A0A0MRY4 SPATA13 Spermatogenesis-associated protein 13 1 WRS(1)PIR;WRS(1)PIR 57.177 0.020574000000000002 15351700.0 1692.74 1711.43 1888.15 1499.3600000000001 2012.03 2039.33 1866.42 1829.0500000000002 2021.19 1812.1399999999999 1659.53 True False 1864.585718670675 1855.6582123641085 2016.2912133683196 1591.9720619063755 1870.7119539266807 2022.7223726177062 1937.447634444214 1792.568162888032 1936.2464131775596 1697.7211711382517 1455.418330627425 1.2811338701958357 1.2749998906253583 1.3853688461509928 1.0938243860238333 1.2853431309472545 1.389787616420716 1.3311963946537544 1.2316514950826978 1.3303710503239654 1.1664832958413895 1.0 10.507218170976401 -10.761761320468622 0.8245856344562448 0.9839673533579492 1.2912237412669476 0.39384187964968354 0.09028589275034558 0.34065802124547523 0.3757249817323662 0.06844429635475571 0.014180486479377096 1.7307672928534478e-11 10.761761320468622 0.30725638790899845 WS(ph)DQGPAQTSR ddPTM_A549_MK2206_60min_R1 2 WSDQGPAQTSR 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WS(1)DQGPAQTSR;WS(1)DQGPAQTSR 126.09 1.963e-06 21457300.0 3178.8 4223.1 3982.3 4260.6 6215.200000000001 4530.6 3902.0 3732.8999999999996 6480.9 4936.7 6182.9 True False 3715.303725801647 4438.037751681478 4547.050021396318 5304.447191265602 5300.952313225658 5010.025084831121 4610.942891693898 4262.050006526798 5012.986497870656 3821.4960413129465 4647.51529064101 0.79941721402905 0.9549269822992578 0.9783830148021233 1.1413512080202288 1.1405992195228523 1.0780007749345373 0.9921307630723107 0.9170599212679412 1.078637978441 0.8222664805446751 1.0 12.182243896379338 -5.34763735843238 1.709755306773366 1.0412416646592713 0.7449690785276073 0.29966519740212394 0.09181898611056075 0.4789774605924449 1.5492550018139633 0.009771461680093338 0.2180939161052184 4.491202546844987e-06 5.34763735843238 -0.29627258613166396 WS(ph)DQGPAQTSR ddPTM_A549_PD325901_60min_R1 1 WSDQGPAQTSR 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WS(1)DQGPAQTSR 123.72 6.193400000000001e-06 23004000.0 3400.3 3644.4 3582.0 4388.1 4569.5 4325.7 3897.4 3730.0 3564.3 4788.8 4480.3 True False 3745.495952831443 3951.5263780229125 3825.0960603158223 4659.142970901831 4248.55408391921 4290.472933381262 4045.7176897391105 3655.602223871608 3414.5048661871324 4486.434350738277 3929.2515029617134 0.9532339556295232 1.005668986839964 0.9734922942531464 1.185758398868068 1.081262953190148 1.091931358974419 1.0296408073368706 0.9303558759514785 0.868996261403327 1.141803813616049 1.0 11.940038799229624 -8.197551828311603 4.523464116131997 0.9357637181872962 1.051312078649094 0.0 0.09024610564579154 0.195543967233739 8.085805293957776 0.012363298497145474 0.015969827251384048 6.345241729204572e-09 8.197551828311603 0.11554836046179773 WS(ph)GNEPTDEFSDLPLR ddPTM_A549_MK2206_60min_R1 2 WSGNEPTDEFSDLPLR 16 0 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 WS(1)GNEPTDEFSDLPLR;WS(0.999)GNEPT(0.001)DEFSDLPLR 78.285 0.00038028 5350300.0 1119.1100000000001 996.04 1428.46 1266.6100000000001 1869.87 1678.51 1548.49 1635.5900000000001 2035.95 1669.29 1825.49 True False 1307.9884083874051 1046.7341815691839 1631.0371075920414 1576.9295068602828 1594.8146000018107 1856.1288140952379 1829.8305890207787 1867.4398912843005 1574.8105757440726 1292.1962296277445 1372.1704520390533 0.9532258958380329 0.7628310171041293 1.1886548826119312 1.1492227547364515 1.1622569175949728 1.352695513401429 1.33353009190778 1.3609387146540532 1.1476785361497144 0.9417169912874406 1.0 10.422243989960887 -5.767677452970322 24.999573235681638 1.1443125814252644 0.8580284344071708 0.43254526158082196 0.13766677576065348 109.96647451603278 440707.49742998974 0.021202405825444203 0.06836358838819528 1.7073499533613034e-06 5.767677452970322 -0.28628414701809357 WS(ph)IPADGR ddPTM_A549_MK2206_60min_R1 2 WSIPADGR 8 0 E5RJF9;P55040 E5RJF9 GEM GTP-binding protein GEM 1 WS(1)IPADGR;WS(1)IPADGR 66.435 0.008481200000000001 4683800.0 1169.4099999999999 1617.4699999999998 1466.6 1334.66 2178.0 1895.49 1655.4699999999998 1725.4 2333.6 2152.7 2382.1 True False 1366.7778186704738 1699.7923142270465 1674.5859330989238 1661.6517599151643 1857.6190851791537 2096.069493675571 1956.2474702492293 1969.9807338158896 1805.0433259934514 1666.4035748849185 1790.5588273845526 0.7633247217389163 0.9493082764054798 0.9352308941141972 0.9280073541857984 1.0374521388345308 1.1706230823688009 1.0925345988808959 1.1002044186916866 1.0080893732098466 0.9306611709144534 1.0 10.806194202695995 -4.603907573009448 0.7603489886401197 1.0284208591286947 0.2720179529945781 0.576088156353141 0.06837225460352633 3.540591013149739 0.7199428254357401 0.01104866490631878 2.8884663967744437 2.4893870557798284e-05 4.603907573009448 -0.7564029061341166 WS(ph)IPADGR ddPTM_A549_PD325901_60min_R1 2 WSIPADGR 8 0 E5RJF9;P55040 E5RJF9 GEM GTP-binding protein GEM 1 WS(1)IPADGR;WS(1)IPADGR 61.56 0.010776 6259000.0 1480.8700000000001 1989.31 2215.13 2638.3 2960.9 2626.8 2339.8199999999997 2524.8 2981.2 2828.69 2938.1 True False 1631.206832241124 2156.956135184052 2365.4620424587897 2801.2617989859623 2752.9365985504733 2605.408211712765 2428.863130498632 2474.440883332717 2855.9105314022618 2650.086030652746 2576.7323261504403 0.633052496639454 0.8370897175829198 0.9180084475412772 1.087137290341276 1.0683828392308319 1.011128779373512 0.9426136761854809 0.9603018746729726 1.1083458310428795 1.02846772392998 1.0 11.33132696086132 -5.46390346215615 1.3417689753596924 1.0381071262853028 0.5508951659814435 0.8343944266873807 0.05245696908763772 0.29134670683223907 0.589857580222286 0.008980357410949966 0.17316568754060616 3.436343247165278e-06 5.46390346215615 -0.48721196030385927 WS(ph)PKKETGPK ddPTM_A549_MK2206_60min_R1 1 WSPKKETGPK 10 2 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 WS(0.996)PKKET(0.004)GPK 52.555 0.0075326 4992600.0 2794.4 3108.8 3230.3 3112.3 4616.7 3612.8 3793.4 2524.0 5615.9 4989.5 5214.8 True False 3266.026403479339 3267.024641241597 3688.405113657065 3874.8136397164562 3937.5895457055103 3995.104098017453 4482.611677435065 2881.7847294258186 4343.907616749496 3862.3684846417523 3919.8212388417637 0.8332079971188663 0.8334626612225162 0.9409625819433853 0.9885179460024033 1.004532938055358 1.0192056868383963 1.1435755368169789 0.7351826917181902 1.1081902342141097 0.9853430167603797 1.0 11.936572147238019 -5.967022719530107 1.155175435041218 1.030922493692055 0.8045763356010859 0.24844299407507286 0.10025266560705183 0.5477654969846736 1.133146812232523 0.01479007938903065 0.10976128716798568 1.0788902800635447e-06 5.967022719530107 -0.22634615809096903 WS(ph)PKKETGPK ddPTM_A549_PD325901_60min_R1 1 WSPKKETGPK 10 2 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 WS(0.999)PKKET(0.001)GPK 60.628 0.0025989 9899600.0 3251.5 3613.3 4010.0 4070.0 3686.7 5624.5 4749.1 4524.1 4431.4 4307.5 4755.7 True False 3581.5898863722114 3917.8054718774556 4282.142714088902 4321.394656359346 3427.758910424543 5578.695936797032 4929.829599307235 4433.8632764122085 4245.163668608607 4035.523714877449 4170.779048866154 0.8587340265233863 0.9393462051034637 1.0267009265938032 1.0361121041725136 0.8218509948054897 1.3375668841325044 1.1819925106431692 1.0630779584494112 1.0178347063872095 0.9675707266186938 1.0 12.02610117072083 -5.185510832836203 1.0383442114664836 1.0387826953825452 0.7394664063154904 0.19479515248766843 0.12222794736758749 2.873582233717593 2.1697050019631443 0.018229807077471426 0.9844320485392458 6.523627685668302e-06 5.185510832836203 -0.29931628906705476 WS(ph)PPQNYK ddPTM_A549_MK2206_60min_R1 4 WSPPQNYK 8 0 H3BRF9;Q96K21-2;Q96K21;H3BRM1;Q96K21-3 H3BRF9;Q96K21-3 ZFYVE19 Abscission/NoCut checkpoint regulator 1 WS(1)PPQNYK;WS(1)PPQNYK;WS(1)PPQNYK;WS(1)PPQNYK 119.75 0.0012157 26905200.0 13893.399999999998 17086.0 17744.1 17317.6 24730.4 18864.800000000003 17198.199999999997 19700.7 26149.6 22371.3 23495.4 True False 16238.266258982194 17955.60441979345 20260.48019603204 21560.412777416597 21092.590920162784 20861.060614559232 20322.890322893367 22493.33455586339 20226.757352330456 17317.607792457362 17660.843739948377 0.9194501971755545 1.0166900678237887 1.1471977496864065 1.2208030994944763 1.1943138861736193 1.1812040761887297 1.150731563120255 1.2736274034849218 1.1452882801164277 0.9805651444208963 1.0 14.10826664837738 -4.139499020934176 14.832309096347009 1.1045854569213864 0.19838588249188227 0.0 0.10868015372211573 0.0 0.0 0.01512020888649537 0.0 7.252721131300704e-05 4.139499020934176 -0.9061995744295042 WS(ph)PPQNYK ddPTM_A549_PD325901_60min_R1 3 WSPPQNYK 8 0 H3BRF9;Q96K21-2;Q96K21;H3BRM1;Q96K21-3 H3BRF9;Q96K21-3 ZFYVE19 Abscission/NoCut checkpoint regulator 1 WS(1)PPQNYK;WS(1)PPQNYK;WS(0.999)PPQNY(0.001)K 88.36399999999999 0.0026873 45822100.0 14690.599999999999 14491.3 16828.8 17355.0 19999.100000000002 17651.9 16096.0 16702.9 20628.1 18888.7 16647.7 True False 16181.97889735186 15712.532708221781 17970.903567795325 18426.978933935257 18594.4322091495 17508.14877886879 16708.542088069156 16369.747556328439 19761.172693150063 17696.064258434286 14600.138438465221 1.1083442095808596 1.0761906658929938 1.2308721347771303 1.2621098773548558 1.2735791710139541 1.1991769018259568 1.1444098395703686 1.1212049546873502 1.3534921450530695 1.2120477030418153 1.0 13.833694428349286 -11.096604060883102 1.4418167389867418 1.0004079826510048 1.2152444441157442 0.0 0.10026233067151782 0.32398406965055665 1.2074467279108467 0.06624934263378685 0.014586326240008144 8.005637832055771e-12 11.096604060883102 0.21483646146473934 WS(ph)TPTKDCTSGPYTAQIIPGTGNK ddPTM_A549_MK2206_60min_R1 1 WSTPTKDCTSGPYTAQIIPGTGNK 24 1 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 WS(0.398)T(0.398)PT(0.055)KDCT(0.055)S(0.055)GPY(0.03)T(0.009)AQIIPGTGNK 52.402 0.0018984000000000002 2037900.0 700.8 770.29 776.76 497.58 871.92 958.6 843.09 621.32 1361.2 945.48 906.08 True False 819.0779070849994 809.4944708253947 886.9162480525843 619.4871223372147 743.6617230254395 1060.0384157328187 996.2685398662758 709.3940127126982 1052.8903733897348 731.8954113356215 681.075329464169 1.2026245433517653 1.1885535062065138 1.30222929782284 0.9095721068396232 1.0918934967303981 1.5564187540999261 1.4627875901041412 1.041579370186274 1.5459235239339655 1.0746174170064782 1.0 9.411670564273603 WS(ph)TTAGFLK ddPTM_A549_MK2206_60min_R1 2 WSTTAGFLK 9 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 WS(0.485)T(0.485)T(0.031)AGFLK;WS(0.801)T(0.177)T(0.022)AGFLK 116.75 0.00018777 93987000.0 36529.0 47914.0 48260.0 47929.0 72547.0 59758.0 54325.0 60397.0 79968.0 59451.0 58229.0 True False 42694.20215169511 50352.6179427592 55103.99368018141 59671.607151614546 61875.43240242972 66081.55189584996 64195.14930581009 68958.45970805513 61855.375682655285 46020.97780948729 43769.132261355575 0.9754409088294964 1.150413895393039 1.2589692971554192 1.363326254569125 1.4136773841655634 1.509775233862572 1.4666763079168685 1.5755043827757031 1.4132191452483587 1.0514482566089138 1.0 15.41762616186663 -3.7484584333674897 15.93988014757809 1.269377034769396 1.245237213538838 0.0 0.20482537681683954 0.0 0.0 0.03121753076912586 0.0 0.00017846027859634933 3.7484584333674897 -0.024139821230557912 WS(ph)TTAGFLK ddPTM_A549_PD325901_60min_R1 2 WSTTAGFLK 9 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-8;Q5VWU8;Q8TEW0-10;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3;Q8TEW0-9 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 WS(0.82)T(0.155)T(0.025)AGFLK;WS(0.975)T(0.023)T(0.002)AGFLK 183.07 5.1678999999999994e-11 115792000.0 56925.0 62076.0 75312.0 72387.0 85655.0 78862.0 75313.0 81088.0 85278.0 73415.0 69844.0 True False 62703.984094029904 67307.36237574083 80423.12520784602 76858.18058719506 79638.88829370818 78219.77401861273 78179.0774278551 79470.63622769469 81694.06222223333 68779.56437091775 61253.630777594735 1.0236778342446546 1.0988305757764227 1.3129527864209982 1.2547530589045204 1.3001496773777919 1.2769818380663869 1.2763174433155615 1.2974028676968377 1.3337015485474744 1.122865101999404 1.0 15.902507741208893 -10.883438013865746 1.1279822272638678 0.9997438014162849 1.2517670247379133 0.31150560408634087 0.09731617563161259 0.3481619848615775 0.7852781063362143 0.06852772588815034 0.01641084674838881 1.3078621946107455e-11 10.883438013865746 0.2520232233216284 WSAEASGKPSPSDPGS(ph)GT(ph)ATMMNSSSRGSSPTR ddPTM_A549_PD325901_60min_R1 1 WSAEASGKPSPSDPGSGTATMMNSSSRGSSPTR 33 2 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 2 WSAEAS(0.002)GKPS(0.01)PS(0.046)DPGS(0.237)GT(0.237)AT(0.237)MMNS(0.237)S(0.237)S(0.237)RGS(0.237)S(0.237)PT(0.045)R 42.355 0.0074255 13274000.0 1734.1 2154.1 1835.0 2023.2 1782.8 2322.6 1692.5 1810.9 2481.6 2370.3 1749.9 True False 1910.144555423051 2335.6335668146066 1959.5341347514043 2148.1684689794192 1657.5822783261124 2303.685515655577 1756.909013671536 1774.780178876432 2377.3069819964617 2220.6388534820703 1534.673393530054 1.2446586768728287 1.521909206650273 1.276841146143862 1.399756116210632 1.0800879752748846 1.501091714606873 1.1448097172195681 1.1564546478479598 1.5490637890894705 1.4469781406545137 1.0 10.583715941123833 -11.072338467275689 1.3912111789198671 1.0001347749996312 1.3438416794164734 0.0 0.20129312776325264 0.35307432096789165 1.2205798434488682 0.11251983638168943 0.02487246108927086 8.465673849368068e-12 11.072338467275689 0.34370690441684215 WSAEASGKPSPSDPGSGT(ph)ATMMNSSSR ddPTM_A549_MK2206_60min_R1 1 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGS(0.011)GT(0.282)AT(0.191)MMNS(0.172)S(0.172)S(0.172)R 78.15899999999999 2.1499e-06 9843700.0 1430.0 1980.0 1756.9 1710.1 2986.5 2654.8 2962.3 2284.6 3525.4 1965.8 2477.7 True False 1671.3490398566626 2080.773542736219 2006.0548383073071 2129.074576769307 2547.1898061926263 2935.729173886384 3500.5115653677176 2608.449046294068 2726.9025289069723 1521.7244146926064 1862.418708958779 0.8974077804400185 1.117242611839695 1.0771234355935089 1.14317718487676 1.3676783818482374 1.5762992283983552 1.8795513321087425 1.400570684640712 1.4641726459199391 0.817068904738052 1.0 10.862961740711256 -6.564251454224432 3.2235789846887766 1.3244029015351044 1.0431856935871529 0.22364819057785157 0.268091809131044 0.3602904401492255 7.679786174391133 0.04150911532837611 0.09546095608916376 2.7273981763384007e-07 6.564251454224432 -0.2812172079479516 WSAEASGKPSPSDPGSGTAT(ph)MMNSSSR ddPTM_A549_MK2206_60min_R1 1 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPS(0.002)PS(0.009)DPGS(0.135)GT(0.048)AT(0.255)MMNS(0.184)S(0.184)S(0.184)R 47.38 0.0029771 18977000.0 1542.3 1835.1 1310.4 1495.5 3235.6 3096.7 2307.2 2496.1 3544.3 2195.6 2571.2 True False 1802.6025343852643 1928.4987516541594 1496.2344243371265 1861.8975671355458 2759.6475261734035 3424.3907385769035 2726.388375119467 2849.929818985653 2741.5217090840724 1699.612435089574 1932.7000784900558 0.9326861184760588 0.9978261878898568 0.7741679327224309 0.9633660120664841 1.427871585915912 1.7718169397769405 1.410662940133727 1.4745846242279834 1.418493091398805 0.8793979231466766 1.0 10.916402058348476 -6.672829311800883 6.255727014032786 1.29668865482204 0.9061120116466458 0.4287164874826822 0.23205185612531853 0.19172392119087295 11.059059762850309 0.03665029845237954 0.07670241782746696 2.1240791122580908e-07 6.672829311800883 -0.3905766431753942 WSAEASGKPSPSDPGSGTAT(ph)MMNSSSR ddPTM_A549_PD325901_60min_R1 1 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPS(0.002)DPGS(0.056)GT(0.056)AT(0.248)MMNS(0.212)S(0.212)S(0.212)R 52.577 0.0020651 7745900.0 1177.0 1313.8 1248.4 1111.3 1066.6 1310.9 1467.9 1079.5 1530.9 1248.1 1162.8 True False 1296.488173538396 1424.5185367815016 1333.1239312390478 1179.9424770545802 991.6856955702438 1300.22446502751 1523.7617377657007 1057.968525648632 1466.5615968481552 1169.294752997921 1019.7829715965182 1.2713373429923847 1.3968840198923411 1.3072623963822219 1.157052539529391 0.9724477885894811 1.275001153423799 1.494201982388645 1.037444784935301 1.4381114783199254 1.146611372778009 1.0 9.99404643772515 -11.061644864126244 1.3705319945012875 0.9999569039551497 1.2776659715329988 0.15040968805012267 0.15700210730475828 0.44352551179812566 1.4859429407643099 0.11293199434844899 0.02502190244570517 8.676711069265763e-12 11.061644864126244 0.2777090675778491 WSAEASGKPSPSDPGSGTATMMNS(ph)SSR ddPTM_A549_MK2206_60min_R1 1 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGS(0.048)GT(0.048)AT(0.048)MMNS(0.285)S(0.285)S(0.285)R 55.468999999999994 0.0010689999999999999 13541000.0 1059.5 910.79 1172.3 1033.9 1362.4 1243.1 1519.9 1197.3 2097.5 1230.2 1570.2 True False 1238.317697711981 957.1453207013745 1338.549767742989 1287.2055464135349 1161.9927647603677 1374.644016897003 1796.0461560957347 1367.020941577469 1622.4195990192252 952.2969655889941 1180.2760046846165 1.0491763729813977 0.8109504191412711 1.1340989416290514 1.090597064842889 0.9845093521755242 1.1646801353589527 1.5217170805532552 1.1582214127472268 1.3746103390899271 0.8068426044495066 1.0 10.204908554442573 -7.343537858547686 5.349369134468467 1.2084292796626428 1.0138089779341373 0.1312715780868674 0.19008016182187207 0.27600672966931594 13.509861684790353 0.026996043483960817 0.04357370458454635 4.5337977379551726e-08 7.343537858547686 -0.19462030172850553 WSAEASGKPSPSDPGSGTATMMNS(ph)SSR ddPTM_A549_PD325901_60min_R1 5 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGSGTAT(0.046)MMNS(0.318)S(0.318)S(0.318)R;WSAEASGKPS(0.001)PS(0.005)DPGS(0.132)GT(0.132)AT(0.132)MMNS(0.211)S(0.211)S(0.174)R;WSAEASGKPSPSDPGS(0.006)GT(0.021)AT(0.062)MMNS(0.369)S(0.299)S(0.243)R;WSAEASGKPSPS(0.001)DPGS(0.174)GT(0.146)AT(0.124)MMNS(0.216)S(0.183)S(0.156)R;WSAEASGKPSPS(0.001)DPGS(0.033)GT(0.033)AT(0.144)MMNS(0.291)S(0.249)S(0.249)R 112.88 3.9923000000000004e-14 145935100.0 10267.400000000001 10170.0 12757.099999999999 11441.3 13439.9 12058.6 10853.500000000002 12639.6 13308.199999999999 13160.0 11626.900000000001 True False 11309.738889539613 11027.0615916181 13622.87352067419 12148.003115922404 12495.927789137935 11960.398759616093 11266.535881763093 12387.493262425623 12748.902634512126 12329.075354100343 10196.865008991708 1.1091388264497528 1.0814168454612585 1.3359864535483592 1.191346860550783 1.2254676097132686 1.1729486218626295 1.1049019352348135 1.214833505347202 1.2502766902641158 1.2091044986109385 1.0 13.315838048297708 -10.875651932320064 1.072101643581448 0.9977122196219578 1.1922364507844 0.0 0.09201255615706916 0.35301249644301663 0.7064882397437593 0.052466317118349 0.012067678652121635 1.3315211453340448e-11 10.875651932320064 0.19452423116244233 WSAEASGKPSPSDPGSGTATMMNSS(ph)SR ddPTM_A549_MK2206_60min_R1 1 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPS(0.001)PS(0.002)DPGS(0.04)GT(0.04)AT(0.194)MMNS(0.163)S(0.301)S(0.258)R 55.36600000000001 0.0010168 20131000.0 1327.7 1968.6 2062.6 1762.7 4087.3 2414.4 2851.7 2749.3 4627.8 2753.7 2174.0 True False 1551.7833008515317 2068.793331429555 2355.107695083758 2194.561579130609 3486.0635844135695 2669.890205450989 3369.8169769973047 3139.021694378132 3579.6106890780325 2131.637257472292 1634.135800652373 0.949604861622905 1.265986174835445 1.4411946021521354 1.3429493303154518 2.133276550836153 1.6338239480373211 2.0621401083386215 1.9209062631912137 2.1905221632431005 1.304443153758279 1.0 10.674312164588054 -5.680750483895694 1.1919910035536732 1.6712012096686308 0.8964153016967662 0.3151332192008883 0.35398187921434915 1.1126052842065919 2.0652907726771628 0.07099693575924862 0.881640578078831 2.0856888340407297e-06 5.680750483895694 -0.7747859079718646 WSAEASGKPSPSDPGSGTATMMNSSS(ph)R ddPTM_A549_MK2206_60min_R1 1 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPS(0.001)PS(0.005)DPGS(0.029)GT(0.026)AT(0.131)MMNS(0.1)S(0.1)S(0.608)R 59.748000000000005 0.00024334 8111600.0 1428.0 1609.5 1570.1 1773.0 2605.1 1952.3 2170.4 2215.0 2644.6 2159.1 2431.1 True False 1669.011488751966 1691.4166752696688 1792.7637894167588 2207.3850795929957 2221.893240955103 2158.891090168144 2564.7335858873494 2528.9830331530075 2045.602322558399 1671.3578104399264 1827.3907750533504 0.9133303678318282 0.925591120607626 0.9810511325167542 1.2079436482481705 1.215882925145135 1.18140636345563 1.4034948741669513 1.3839311589384455 1.1194115404783511 0.9146143415280902 1.0 10.835569462113078 -6.0928585691282064 4.625035507975733 1.133907682105647 0.9258104491257956 0.3376275774830769 0.1402447906278222 0.24479189600435172 8.81484629545398 0.021987817809828152 0.06174692327564124 8.074979544871637e-07 6.0928585691282064 -0.2080972329798515 WSDSSKQDDSPSGAS(ph)YGQDYDLS(ph)PSR ddPTM_A549_PD325901_60min_R1 1 WSDSSKQDDSPSGASYGQDYDLSPSR 26 1 J3QSD7;Q9NYV4-3;Q9NYV4;Q9NYV4-2 J3QSD7;Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 WS(0.01)DS(0.041)S(0.044)KQDDS(0.218)PS(0.303)GAS(0.397)Y(0.028)GQDY(0.011)DLS(0.814)PS(0.135)R 54.583 0.0015112 6947000.0 2874.9 2099.9 2730.9 2676.3 3126.7 3089.3 2913.9 2486.9 2655.0 3017.1 3309.2 True False 3166.7577316104803 2276.8659425996907 2916.2352962357563 2841.6089726817 2907.0913785294238 3064.141765054151 3024.790059047261 2437.2968285646925 2543.4195830112058 2826.599791098492 2902.189378747162 1.0911616432755085 0.7845338968136478 1.0048397660026782 0.9791259638295506 1.0016890695755967 1.0558035211254553 1.0422442040474367 0.8398131584427624 0.8763796055614976 0.9739542883720079 1.0 11.502925948403412 -8.231849402947754 24.987511192979795 0.9323567857523689 0.9886225457377585 0.1376995358300781 0.08425214362916504 1432.4207313225734 1209621.7191276122 0.014162614485502288 0.01828282735805605 5.863414505093955e-09 8.231849402947754 0.05626575998538963 WSHS(ph)DSDKK ddPTM_A549_MK2206_60min_R1 1 WSHSDSDKK 9 1 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 WS(0.066)HS(0.926)DS(0.008)DKK 53.528 0.0047744 3620000.0 689.52 899.03 840.17 769.19 1228.1 1140.1 960.09 1023.8 1697.5 1382.0 1401.9 True False 805.8941188545211 944.7867869323958 959.3187395416082 957.6415845302515 1047.4481168542322 1260.74462526287 1134.5259253937456 1168.9267852560029 1313.0189603504814 1069.8052401593154 1053.7695395283179 0.7647726458436546 0.896578190479197 0.9103686371225086 0.9087770604556528 0.9940011336094273 1.1964139956324769 1.076635718566676 1.1092812435812398 1.2460209857064262 1.0152174645683678 1.0 10.041343667259339 -6.901474775648436 2.249265930695873 1.120112606226636 0.8674054183847598 0.673595901563814 0.07670913351059974 0.16314490654813643 1.6726299312494683 0.014356823439761093 0.03016684320816111 1.2546576077811787e-07 6.901474775648436 -0.2527071878418762 WSHS(ph)DSDKK ddPTM_A549_PD325901_60min_R1 2 WSHSDSDKK 9 1 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 WS(0.001)HS(0.999)DSDKK;WS(0.02)HS(0.978)DS(0.002)DKK 122.51 2.4774e-05 13299900.0 2800.0 2642.1 3014.1 3711.0 3561.2 3142.4 3054.1000000000004 3417.1000000000004 4131.8 3874.7 4042.6000000000004 True False 3084.2539387489446 2864.759039450756 3218.654951255698 3940.2200417075046 3311.073597473049 3116.8093362593995 3170.325446767645 3348.94325983691 3958.154814721541 3630.05078073956 3545.385828152806 0.86993463849769 0.8080246208191492 0.9078433511234124 1.1113656545979969 0.9339106540057908 0.8791171080760198 0.894211688215448 0.9445920478510388 1.1164242783651541 1.0238803212655887 1.0 11.791726922584907 -8.629781096907111 6.182972487126286 1.054736571892383 0.9176363591480189 0.3688011829600256 0.07511296212587613 0.17262320447162788 8.952933312865706 0.014305341747343417 0.016218556886510128 2.3454107052778138e-09 8.629781096907111 -0.13710021274436401 WSNS(ph)QPADLAHMGR ddPTM_A549_MK2206_60min_R1 2 WSNSQPADLAHMGR 14 0 Q9BRG2;Q9BRG2-2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 WS(0.045)NS(0.955)QPADLAHMGR;WS(0.101)NS(0.899)QPADLAHMGR 58.98 0.0027858 2862300.0 875.1300000000001 1040.15 983.3199999999999 838.23 1272.96 958.73 1131.6 940.25 1567.4499999999998 1507.7800000000002 1319.97 True False 1022.8305491257067 1093.0891921601408 1122.7695620720258 1043.5963876295748 1085.7092702799148 1060.182172246532 1337.1970723323457 1073.533316894859 1212.4250777033053 1167.1714508013113 992.185019681285 1.0308869100384783 1.1016989477539871 1.1316130961468134 1.0518163114020855 1.0942608976586565 1.06853273453684 1.347729552258194 1.0819890399471108 1.2219747866106334 1.1763647179194827 1.0 9.954465364910302 -5.27696340963191 3.3450518354055556 1.1161784815078637 1.0209603461783352 0.07572705671160007 0.09057558588607605 0.7821092836905379 14.491725670524145 0.014016891628419436 0.18629659248185712 5.284897764506237e-06 5.27696340963191 -0.0952181353295285 WSSSGSGSGSGSGS(ph)LGR ddPTM_A549_PD325901_60min_R1 1 WSSSGSGSGSGSGSLGR 17 0 Q9NUE0 Q9NUE0 ZDHHC18 Palmitoyltransferase ZDHHC18 1 WSSSGSGS(0.001)GS(0.012)GS(0.24)GS(0.746)LGR 77.506 0.00039227 3750300.0 4155.0 4357.1 4662.1 3838.3 5415.9 5172.0 4199.2 5091.6 4976.6 5148.3 5536.1 True False 4576.812541250665 4724.2881082437825 4978.498141484757 4075.3830735882243 5035.505867840695 5129.880946771137 4359.002853890409 4990.04404371707 4767.450808592682 4823.235459385626 4855.194796229345 0.9426630101031419 0.9730378092991804 1.025396168522666 0.8393861100595303 1.0371377625778029 1.0565757218958793 0.8978018466479882 1.027774219809358 0.9819278131322748 0.993417496478506 1.0 12.245313464120422 WST(ph)PTKDCTSGPYTAQIIPGTGNK ddPTM_A549_PD325901_60min_R1 1 WSTPTKDCTSGPYTAQIIPGTGNK 24 1 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 WS(0.189)T(0.796)PT(0.015)KDCTSGPYTAQIIPGTGNK 78.128 9.4838e-06 3894500.0 1116.3 1032.5 1427.4 1248.3 1212.5 1195.2 1437.5 1675.0 951.04 1405.3 1524.6 True False 1229.6259542233734 1119.5123985590653 1524.2719476534899 1325.4046559050062 1127.3381828979193 1185.4666874672964 1492.204849130182 1641.5908109879201 911.0710961306881 1316.5691181700022 1337.0838652356829 0.9196326320238946 0.8372791173885963 1.1399972636606546 0.9912651632150105 0.8431319920977489 0.8866060823031011 1.1160144011364288 1.2277396008354067 0.6813866503206192 0.9846570977340567 1.0 10.384874242363423 -8.780321884970752 24.999969790138447 0.8495437400108342 0.9899765080789936 0.08155664709376176 0.1428947248707158 365.2437112948129 483571.7229123332 0.028465130357123503 0.03032761418119337 1.6583573312170153e-09 8.780321884970752 0.1404327680681594 WT(ph)LGGMVNR ddPTM_A549_MK2206_60min_R1 1 WTLGGMVNR 9 0 Q5TCZ1 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 WT(1)LGGMVNR 52.49 0.025266 755280.0 199.04 419.37 364.59 353.71 372.51 390.69 357.49 332.38 496.07 483.38 296.5 True False 232.63308593920976 440.7141417259031 416.294344298743 440.3689658786453 317.714272461013 432.0325564809669 422.44130557448784 379.4958828710592 383.7109370610092 374.18412227800974 222.87086701629661 1.0438021310438896 1.9774416801352395 1.867872413617447 1.9758929095315314 1.4255531766643208 1.9384882477680498 1.8954532336592846 1.7027612803395697 1.721673820351548 1.6789279248895679 1.0 7.800064234106749 -10.526421336422553 0.6787996695418547 0.9566322847506883 1.756027569737838 0.03483529959740117 0.33156353368780817 0.49643224274976644 0.37954365077366004 0.22154974619515197 0.05143209866807171 2.975628184357352e-11 10.526421336422553 0.7993952849871497 WT(ph)LGGMVNR ddPTM_A549_PD325901_60min_R1 1 WTLGGMVNR 9 0 Q5TCZ1 Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A 1 WT(1)LGGMVNR 54.608000000000004 0.020568 1052200.0 450.13 524.12 542.29 603.78 626.17 634.87 520.04 469.12 763.7 591.05 626.95 True False 495.8268662318081 568.2894317993002 579.0930604546804 641.0741193161292 582.1899793692293 629.6998292104774 539.8304067768069 459.7630335824795 731.6043448382887 553.731002130776 549.8391245634996 0.9017671607589398 1.0335558282623991 1.0532045367168164 1.1659303433982773 1.0588369458637779 1.145243765092884 0.981797006906996 0.8361773708763837 1.3305789132759278 1.0070782114138677 1.0 9.102865757239424 -8.76756779611015 24.999835952478684 1.1561066846769907 1.0322702457725865 0.06365252274984767 0.12314964602979081 224.55146620325624 916016.2462324834 0.025202661651742828 0.027166260215440944 1.7077811038391735e-09 8.76756779611015 -0.12383643890440421 WTDGSLS(ph)PPAKEPLASDSR ddPTM_A549_MK2206_60min_R1 2 WTDGSLSPPAKEPLASDSR 19 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 WTDGS(0.011)LS(0.989)PPAKEPLASDSR;WTDGS(0.007)LS(0.993)PPAKEPLASDSR 135.55 2.3321e-17 49460000.0 8033.0 10247.7 10447.0 9455.1 15907.4 11880.7 11681.8 11456.0 17850.3 15711.2 13798.7 True False 9388.774012005983 10769.264158534324 11928.541690361686 11771.599924455571 13567.442532405355 13137.907788229615 13804.231848331556 13079.923082528594 13807.235551071686 12162.029008097712 10372.101965253867 0.9051949203216479 1.0382913892103003 1.1500602028713014 1.134929059113569 1.3080706859473377 1.2666581790500218 1.330900129460276 1.261067730181001 1.3311897238694126 1.1725712925730996 1.0 13.340420673657288 -5.476862884008393 1.398888470754399 1.1970761931431468 0.8485180788721758 0.516177604280431 0.09530246548126059 0.8188956128834777 1.8780614541796996 0.0199941981865678 0.3558750368567844 3.335316991828542e-06 5.476862884008393 -0.34855811427097105 WTDGSLS(ph)PPAKEPLASDSR ddPTM_A549_PD325901_60min_R1 2 WTDGSLSPPAKEPLASDSR 19 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 WTDGS(0.035)LS(0.964)PPAKEPLASDSR;WTDGS(0.001)LS(0.999)PPAKEPLASDSR 128.98 5.3888e-17 60952000.0 8390.5 9615.0 10363.4 10383.2 12688.3 13165.2 11372.8 11385.7 14357.9 11719.0 11978.5 True False 9242.297383240364 10425.289793845433 11066.72264418676 11024.546682041859 11797.117580258693 13057.98697610814 11805.598127434956 11158.603281591135 13754.487393942209 10979.060340022954 10505.220437967748 0.8797813846758556 0.992391340610671 1.053449826163537 1.0494350639418448 1.1229766809672834 1.24299980692592 1.1237839507648417 1.0621960145892746 1.309300216512452 1.045105184118047 1.0 13.35881881489941 -5.518639277288457 0.8122301910183496 1.146435023424273 0.7977365988276922 0.4308450259786556 0.0851857811085602 1.5449432715221405 0.9220019276807041 0.018033077707969424 0.44406302299945044 3.0294286108721716e-06 5.518639277288457 -0.34869842459658085 WTKPSSFS(ph)DSER ddPTM_A549_MK2206_60min_R1 2 WTKPSSFSDSER 12 1 Q8NC56;H0Y9B7;Q8NC56-2 Q8NC56 LEMD2 LEM domain-containing protein 2 1 WTKPS(0.006)S(0.027)FS(0.803)DS(0.164)ER;WT(0.005)KPS(0.113)S(0.113)FS(0.504)DS(0.265)ER 62.765 0.0020629999999999997 273510000.0 5197.7 7381.4 6964.700000000001 7431.5 10850.0 7758.5 8356.6 8023.299999999999 12236.3 9612.099999999999 9790.6 True False 6074.944688435639 7757.08173149148 7952.399187409024 9252.217833612714 9253.979372908088 8579.499320324505 9874.886050417534 9160.627345325736 9464.797587355879 7440.719934106621 7359.323813186355 0.8254759326598213 1.0540481609998498 1.0805882971421916 1.2572103182950982 1.2574496798641894 1.1657999482169614 1.3418197515271473 1.2447648150651864 1.2860960908388022 1.0110602717024655 1.0 12.84535749983322 -5.264527004002808 1.4388863877487414 1.1765068455128063 0.6882213572380526 0.5106581940449504 0.10488603557680777 0.9391492933482077 1.7176328263611544 0.018272879586302505 0.6560857959345454 5.438423150899804e-06 5.264527004002808 -0.4882854882747537 WTKPSSFS(ph)DSER ddPTM_A549_PD325901_60min_R1 4 WTKPSSFSDSER 12 1 Q8NC56;H0Y9B7;Q8NC56-2 Q8NC56 LEMD2 LEM domain-containing protein 2 1 WTKPS(0.02)S(0.016)FS(0.804)DS(0.16)ER;WTKPS(0.001)S(0.011)FS(0.981)DS(0.007)ER;WTKPS(0.012)S(0.195)FS(0.791)DS(0.001)ER;WTKPSS(0.002)FS(0.995)DS(0.003)ER 138.97 9.4604e-09 496153000.0 15514.400000000001 15773.9 17863.2 18287.1 20682.9 21811.7 19376.300000000003 20505.600000000002 23899.0 19000.600000000002 19121.4 True False 17089.41046690236 17103.221911506862 19075.504172147834 19416.65263398256 19230.204456131454 21634.072746846086 20113.675699618205 20096.599721667986 22894.608141011227 17800.898873337315 16769.589020541513 1.0190715136768762 1.0198951143380242 1.13750576408174 1.1578490450898105 1.1467308132939853 1.2900776948287724 1.1994137527747657 1.1983954822656138 1.3652456308241674 1.061498814999731 1.0 14.033559712143298 -5.872120881264129 1.5871013106571268 1.1868131624149414 1.0015339931091727 0.288491670480418 0.0934800414408334 0.5911589620623346 2.5990696220756306 0.018944486785771777 0.1181746819159196 1.3423912687575972e-06 5.872120881264129 -0.1852791693057687 WVKQESEIS(ph)KES(ph)QEMDARPK ddPTM_A549_PD325901_60min_R1 1 WVKQESEISKESQEMDARPK 20 3 A0A1W2PNT6;F5GYH1;A0A1W2PRM0;A0A1W2PRL5;A0A1W2PR09;Q8NC96 A0A1W2PNT6 NECAP1 Adaptin ear-binding coat-associated protein 1 2 WVKQES(0.455)EIS(0.548)KES(0.998)QEMDARPK 41.482 0.025086 20029000.0 1412.3 1388.1 1353.9 1718.8 1940.0 2312.5 1456.3 1825.0 2739.5 1485.1 1510.9 True False 1555.6756563196916 1505.080058537373 1445.7837956620856 1824.9663723219767 1803.7410926366717 2293.6677667069303 1511.7202934179375 1788.5989433151954 2624.368341867871 1391.3305325512479 1325.068878384228 1.1740338043533727 1.1358504324489518 1.0911008621869196 1.377261516055918 1.3612432697356311 1.730980029886295 1.1408616699694207 1.349815826552496 1.9805523959388378 1.0500061960913447 1.0 10.371851638994993 -6.418255028651783 2.734474609531074 1.4537271368261222 1.1322479602130806 0.08498883038476912 0.27732892464571074 0.4580794189376389 6.606417352724834 0.05192820826994625 0.13433817649991758 3.817200493906357e-07 6.418255028651783 -0.3214791766130416 WVNPHKL ddPTM_A549_MK2206_60min_R1 1 WVNPHKL 7 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 76.847 0.017672999999999998 3547900.0 990.95 1670.6 1323.1 1429.4 2359.4 1608.0 1614.2 1843.7 2508.8 1458.9 1863.2 False True 1158.1981335985733 1755.6264042904684 1510.7354753055943 1779.6030641682048 2012.3353854782818 1778.157492695986 1907.479245456762 2105.0501210944467 1940.560805730361 1129.3334767499452 1400.5160182960003 0.8269795692931426 1.2535568185978543 1.078699176281966 1.270676694104104 1.436852816525925 1.2696445234946045 1.3619831694446316 1.5030532272352364 1.3856041490274635 0.8063695537906084 1.0 10.45174276888425 -4.808572768569802 1.608205407951067 1.2443874870818123 2.206047044090684e-10 0.259681073748639 0.1958863662379043 4.107718449967614 3.703389719467772 0.026842675017688132 11.486128495742243 1.5539149014654794e-05 4.808572768569802 -1.2443874868612077 WVNPHKL ddPTM_A549_PD325901_60min_R1 2 WVNPHKL 7 1 P11413;P11413-2;P11413-3 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 73.039 0.019507 16626100.0 3340.2 2894.8 3432.7 4178.3 4336.0 4476.9 3931.7 4491.4 5398.4 3927.3 4098.6 False True 3679.294645074725 3138.754955301482 3665.6636645019857 4436.384101392202 4031.454318387939 4440.441610711464 4081.3229950087944 4401.81550356486 5171.524021441689 3679.3296077627897 3594.498183166057 1.0235906258920344 0.8732108893533634 1.0197984468789592 1.2342151464059459 1.1215624860427689 1.2353439574701064 1.1354360990145052 1.2245980604969209 1.4387332411687512 1.0236003526150101 1.0 11.811574659167848 -6.135782578510624 3.864796377513579 1.2047637108097653 0.9474690230581424 0.35990763851256424 0.11892374890183192 0.21436639759348197 5.583222363807853 0.021984179098639225 0.06301339856215196 7.315052063637843e-07 6.135782578510624 -0.2572946877516229 WYDLMDNKDKGS(ph)S ddPTM_A549_PD325901_60min_R1 1 WYDLMDNKDKGSS 13 2 Q9BSJ8;Q9BSJ8-2 Q9BSJ8 ESYT1 Extended synaptotagmin-1 1 WYDLMDNKDKGS(0.5)S(0.5) 59.861999999999995 0.0027828 3482300.0 3694.6 3616.8 4408.0 4264.5 4928.8 5007.8 4182.6 4654.4 4880.9 4524.3 4637.7 True False 4069.6730721792296 3921.6004291607046 4707.153387457326 4527.908479617796 4582.61809143692 4967.018137130798 4341.77113180654 4561.564340693834 4675.7727467869645 4238.634925878132 4067.2923008025205 1.0005853455322695 0.964179640687966 1.1573186875525405 1.1132488507709148 1.1266999646257831 1.2212100261765677 1.0674844124062246 1.1215236091573229 1.1496033235340337 1.0421269513975684 1.0 11.989852960184253 -5.747566553639378 24.928901053149083 1.0960913898500182 0.9823824321919096 0.39896417370417114 0.058598652944205465 228.5232511906567 410639.25008869066 0.009865676033594405 0.037815285627416706 1.788271463700872e-06 5.747566553639378 -0.11370895765810862 WYNHIK ddPTM_A549_PD325901_60min_R1 1 WYNHIK 6 0 P24534;C9JZW3;F2Z2G2 P24534 EEF1B2 Elongation factor 1-beta 0 74.417 0.049868 2133100.0 1497.4 1607.5 1669.7 2033.3 2305.2 2838.7 2790.5 2722.1 2770.3 2231.7 2130.2 False True 1649.4149456723815 1742.9696665217398 1783.015882721755 2158.892323040654 2143.290704508276 2815.582568367985 2896.69400452019 2667.805580053861 2653.8739249777573 2090.7900811356944 1868.198904450381 0.8828904362073988 0.9329679309679912 0.954403665730825 1.15560089340476 1.1472497384526763 1.5071107052149362 1.550527621882098 1.4280093911299676 1.4205521257162497 1.1191474720143888 1.0 10.867432349553134 -6.396329371614115 1.7597493273089677 1.2693113181005446 0.905758206475292 0.5151535658861415 0.16267074529912587 0.33736204582504525 2.0087989551502683 0.03182231412636486 0.09947564331086317 4.0148620574125487e-07 6.396329371614115 -0.3635531116252526 Y(ph)ATPQVIQAPGPR ddPTM_A549_MK2206_60min_R1 1 YATPQVIQAPGPR 13 0 A0A5F9ZHD0;A0A5F9ZHP4;C9J1X3;A0A5F9ZI29;A0A5F9ZHJ2;Q07912;A0A5F9ZGX5;A0A499FJ16;Q07912-3 A0A5F9ZHD0 TNK2 Activated CDC42 kinase 1 1 Y(1)ATPQVIQAPGPR 128.01 2.2746e-21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 Y(ph)ATPQVIQAPGPR ddPTM_A549_PD325901_60min_R1 2 YATPQVIQAPGPR 13 0 A0A5F9ZHD0;A0A5F9ZHP4;C9J1X3;A0A5F9ZI29;A0A5F9ZHJ2;Q07912;A0A5F9ZGX5;A0A499FJ16;Q07912-3 A0A5F9ZHD0 TNK2 Activated CDC42 kinase 1 1 Y(0.999)AT(0.001)PQVIQAPGPR;Y(1)ATPQVIQAPGPR 149.96 9.0949e-13 17472700.0 9776.0 10763.9 10819.9 10743.1 12251.2 12686.9 11356.2 11748.7 13299.5 13289.3 15201.099999999999 True False 10768.452323289177 11671.011628910328 11554.20347934426 11406.676887649652 11390.717976345564 12583.582092728295 11788.366405351087 11514.362961823153 12740.568265257078 12450.211330033875 13331.461067712278 0.8077473480659595 0.8754488026204851 0.866686961065926 0.8556209127952 0.854423826352609 0.9439011994870325 0.8842516469482522 0.8636985026127414 0.9556768159578326 0.9338969874942876 1.0 13.702547281479104 -8.659960053610492 0.3351577799490739 1.012692771076249 0.8354580921889686 0.5572242924496724 0.0357206344929936 0.40636053592600074 0.13403582539037448 0.022711133907686514 0.022702801700035746 2.1879628634332593e-09 8.659960053610492 -0.1772346788872804 Y(ph)DEGSGGS(ph)GDEGRDEAHKR ddPTM_A549_MK2206_60min_R1 1 YDEGSGGSGDEGRDEAHKR 19 2 O94762-4;O94762 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 2 Y(0.897)DEGS(0.142)GGS(0.961)GDEGRDEAHKR 45.784 0.017311 24347000.0 769.45 974.54 1190.6 580.3 1269.3 1110.9 1147.2 950.48 1684.1 1624.9 1670.8 True False 899.3143487536424 1024.139923403108 1359.4449829180262 722.473526050657 1082.587651431543 1228.4547006442615 1355.631390402675 1085.213450722921 1302.6540389550787 1257.8339614579395 1255.8942482658624 0.7160749004109341 0.8154666882321019 1.0824517946436545 0.5752662113456191 0.8620054219743255 0.9781513868229834 1.0794152392006966 0.8640962025436318 1.037232267568533 1.0015444876786046 1.0 10.294499272836175 -7.2321719255219445 3.9206491880003917 1.0085875857810105 0.8094527195491317 0.3570007345315266 0.12298526502697765 0.17893157586743688 6.146170475384465 0.017232762395167207 0.02988020345126765 5.859061740784837e-08 7.2321719255219445 -0.19913486623187882 Y(ph)DEGSGGS(ph)GDEGRDEAHKR ddPTM_A549_PD325901_60min_R1 1 YDEGSGGSGDEGRDEAHKR 19 2 O94762-4;O94762 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 2 Y(0.694)DEGS(0.561)GGS(0.746)GDEGRDEAHKR 50.851000000000006 0.008845100000000002 36581000.0 1545.8 1517.9 1662.1 1781.0 1659.0 1440.3 1344.1 1568.9 1581.6 1791.4 2005.0 True False 1702.728478042185 1645.8187600705123 1774.9001010192433 1891.0083250555265 1542.4775632392982 1428.5706743299436 1395.2504610197411 1537.6070587217598 1515.1308521621552 1678.2906982777627 1758.3977107421913 0.9683409319973982 0.9359764005697202 1.0093849020481758 1.0754155976791862 0.8772063076607642 0.8124275103423372 0.7934783197771729 0.8744364538968609 0.8616542451722385 0.9544431774592014 1.0 10.780045697818558 -6.785876734341408 24.998822086354817 0.9050531583993615 0.9937654001258063 0.390297358347789 0.06534923578749063 278.12151602552314 284510.95378896955 0.01208051999826184 0.022837543247207034 1.637281164454202e-07 6.785876734341408 0.08871224172644476 Y(ph)FLEHLR ddPTM_A549_PD325901_60min_R1 1 YFLEHLR 7 0 E9PHY8;Q8NDA8-2;Q8NDA8 E9PHY8 MROH1 Maestro heat-like repeat-containing protein family member 1 1 Y(1)FLEHLR 40.103 0.049301 486910000.0 701.13 500.97 468.23 1474.1 551.91 1183.1 635.98 723.14 627.75 715.9 925.4 True False 772.3082014553742 543.1885000543679 500.0069034957222 1565.1518090759976 513.1457455861365 1173.465225855555 660.1825669216094 708.7164054076441 601.3678505594287 670.6979518237421 811.5816665939263 0.9516087329776972 0.6692961687195818 0.61608945110129 1.928520410822832 0.632278631600593 1.4458991302506794 0.8134517992407173 0.8732533453866809 0.7409825471825526 0.8264084557732189 1.0 9.664592465154207 Y(ph)GEVFEPTVER ddPTM_A549_MK2206_60min_R1 1 YGEVFEPTVER 11 0 M0R0W6;P30530-2;P30530 M0R0W6 AXL Receptor protein-tyrosine kinase;Tyrosine-protein kinase receptor UFO 1 Y(1)GEVFEPTVER 44.309 0.047173 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 Y(ph)IRQPKPK ddPTM_A549_PD325901_60min_R1 1 YIRQPKPK 8 2 H7C517;Q5TCS8 H7C517 AK9 Adenylate kinase 9 1 Y(1)IRQPKPK 41.18899999999999 0.033226 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 Y(ph)LT(ph)TQLHR ddPTM_A549_MK2206_60min_R1 1 YLTTQLHR 8 0 F8W925;Q8NFI3-2;Q8NFI3-3;Q8NFI3;J9JID0 F8W925 ENGASE Cytosolic endo-beta-N-acetylglucosaminidase 2 Y(0.999)LT(0.996)T(0.005)QLHR 41.54 0.033522 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 Y(ph)MEDSTYYK ddPTM_A549_PD325901_60min_R1 2 YMEDSTYYK 9 0 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-4;Q05397-3;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 Y(0.997)MEDS(0.001)T(0.002)YYK;Y(0.988)MEDS(0.005)T(0.007)Y(0.001)YK 69.825 0.0007641 9114800.0 8117.8 8955.8 7494.8 8151.4 9113.9 8827.0 7719.1 7255.6 8670.8 10037.0 10181.0 True False 8941.913079991496 9710.536696382836 8003.442197893636 8654.893464827419 8473.771105248123 8755.115838582518 8012.854574553594 7110.881366091914 8306.396429519233 9403.262107074861 8928.801542676425 1.0014684543331378 1.0875520807546233 0.8963624244127381 0.9693230859102618 0.949037904442895 0.9805477024812622 0.8974165834300452 0.7963981876072043 0.9302924238844013 1.0531382136931464 1.0 13.124250829048982 -5.758822243718909 24.99999426336025 0.9467540791220148 1.044510270268588 0.2657302499619133 0.0656200494858142 66.89067850179038 638928.286733443 0.008689555764721604 0.030828014117954553 1.7425199390572476e-06 5.758822243718909 0.09775619114657319 Y(ph)PT(ph)AER ddPTM_A549_MK2206_60min_R1 1 YPTAER 6 0 A0A0C4DFP1;Q96B18 A0A0C4DFP1 DACT3 Dapper homolog 3 2 Y(1)PT(1)AER 56.011 0.059940999999999994 2371900.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 Y(ph)QKLNT(ph)WNGDLAK ddPTM_A549_MK2206_60min_R1 1 YQKLNTWNGDLAK 13 1 E5RK22;Q8IUQ0-2;Q8IUQ0 E5RK22 CLVS1 Clavesin-1 2 Y(1)QKLNT(1)WNGDLAK 53.328 0.012456 15880000.0 1556.0 1757.8 1890.3 1436.6 2147.4 1718.5 1531.9 1697.5 2695.2 2767.1 2609.8 True False 1818.6147594524243 1847.2645118291541 2158.372964228075 1788.5670644914253 1831.5203046435788 1900.350529352024 1810.2264007652177 1938.1258233757235 2084.741503349997 2142.010188165586 1961.7146331842525 0.927053674723551 0.941658119168269 1.1002481847854737 0.9117366176691182 0.9336323814186254 0.9687191486497594 0.9227776406127229 0.9879754122187284 1.062713948341226 1.0919071265164995 1.0 10.937899475437963 -8.545757550779241 7.926840990981402 1.0294681741915803 0.9601354266651471 0.34938911167716535 0.053474983106621195 0.18615109857001247 50.67303756726195 0.008703849194310545 0.00993173003231341 2.846049499522924e-09 8.545757550779241 -0.06933274752643326 Y(ph)QKLNT(ph)WNGDLAK ddPTM_A549_PD325901_60min_R1 2 YQKLNTWNGDLAK 13 1 E5RK22;Q8IUQ0-2;Q8IUQ0 E5RK22 CLVS1 Clavesin-1 2 Y(1)QKLNT(1)WNGDLAK;Y(1)QKLNT(1)WNGDLAK 73.296 0.00070495 63460000.0 8506.3 9598.2 8160.1 9111.8 12241.6 10044.5 9130.8 11086.2 10339.2 11150.9 12527.0 True False 9369.853313992908 10407.073998885828 8713.893456667536 9674.615191600766 11381.792247227351 9962.700922243366 9478.277590565474 10865.07704404435 9904.67937953652 10446.830270975497 10986.258415195714 0.8528702821183356 0.9472810128415708 0.793162979364736 0.8806105614828119 1.0360025967971545 0.9068329312610554 0.8627393633355223 0.9889697323172599 0.901551647996628 0.9508997400357793 1.0 13.423412511520924 Y(ph)S(ph)ILSELY(ph)ELIGFHRK ddPTM_A549_MK2206_60min_R1 1 YSILSELYELIGFHRK 16 1 H0YBR0;Q96Q05-3;Q96Q05;Q96Q05-2 H0YBR0 TRAPPC9 Trafficking protein particle complex subunit 9 3 Y(0.772)S(0.728)ILS(0.728)ELY(0.772)ELIGFHRK 49.993 0.004442 5196900.0 3043.4 2459.8 2344.3 2208.4 2614.9 1861.9 1718.7 1734.8 3386.2 3796.7 7652.1 True False 3557.0515160138198 2584.9933133447225 2676.7569909749136 2749.458099138843 2230.2516739370835 2058.925022170807 2030.9655427868536 1980.7132126021831 2619.2311066502493 2939.022833077331 5751.872382783819 0.6184162789599759 0.44941770980211226 0.4653714152259066 0.4780109703699905 0.38774359469666736 0.3579573546056873 0.35309641932700475 0.3443597285869454 0.4553701703274893 0.5109680183229115 1.0 12.489815951613261 -10.467443187649016 0.7483909204653707 1.0106776225661958 0.4269578984221628 0.200080760735162 0.15916857744273705 0.183923150036 0.18168168147129551 0.061421628459630194 0.01673988087687487 3.4084490960383614e-11 10.467443187649016 -0.583719724144033 Y(ph)SISDR ddPTM_A549_PD325901_60min_R1 1 YSISDR 6 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 Y(0.843)S(0.157)ISDR 81.635 0.044569 2291000.0 892.04 759.16 657.25 740.18 1164.3 915.97 801.31 822.7 867.86 813.84 731.33 True False 982.5992441148603 823.1370774722519 701.8549373653193 785.8992375292531 1082.5235846169462 908.5106440088858 831.8042905436573 806.2906031043353 831.3868622644457 762.4540035091968 641.3810462828358 1.532005427677628 1.283382292387333 1.094286994342854 1.2253234517670606 1.6878010207672642 1.4164912562886236 1.296895652536712 1.2571163550548357 1.296244825260741 1.188769153575783 1.0 9.325037910505035 -10.38969781910614 0.5122554617590644 0.9596127341023428 1.3550189044680279 0.2526165758938973 0.15858562579141544 0.9695732615232007 0.40857678309563167 0.18173524179201536 0.03952922243953253 4.076638305056911e-11 10.38969781910614 0.39540617036568504 Y(ph)VKT(ph)PEGLK ddPTM_A549_MK2206_60min_R1 8 YVKTPEGLK 9 1 Q9Y2G1-2;Q9Y2G1 Q9Y2G1-2 MYRF Myelin regulatory factor;Myelin regulatory factor, N-terminal;Myelin regulatory factor, C-terminal 2 Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK 57.019 0.0080568 1347039300.0 32112.6 33700.4 29025.6 26345.699999999997 38315.6 28544.999999999996 26331.499999999996 27692.8 39908.09999999999 40392.40000000001 38568.700000000004 True False 37532.42180230842 35415.60641395339 33141.866534676185 32800.39768270342 32679.425996368416 31565.61295336251 31115.592709543263 31618.339205643155 30868.97907014024 31267.728786259857 28991.027348031843 1.2946219998256265 1.2216057743934248 1.1431766848692286 1.1313982526021173 1.1272255240926112 1.0888062908024352 1.0732835485961367 1.090625000144732 1.0647769980540511 1.0785312438533703 1.0 14.823318838290229 -2.0000000000000004 0.2101340186125031 1.006985949647047 2.383317060062726 0.8860656471220522 0.02589113500744241 7.673358366768101 0.08731678286918577 0.014890379138686497 3.57835902720631 0.00999999999999999 2.0000000000000004 1.3763311104156788 Y(ph)VKT(ph)PEGLK ddPTM_A549_PD325901_60min_R1 8 YVKTPEGLK 9 1 Q9Y2G1-2;Q9Y2G1 Q9Y2G1-2 MYRF Myelin regulatory factor;Myelin regulatory factor, N-terminal;Myelin regulatory factor, C-terminal 2 Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK;Y(1)VKT(1)PEGLK 51.218 0.017473 1882837000.0 43083.799999999996 39322.1 41290.100000000006 41007.7 47442.9 40925.90000000001 43887.2 42070.7 44282.3 45004.2 44950.8 True False 47457.635659382766 42635.911367921944 44092.29448354167 43540.65249375605 44110.674373119735 40592.61303933891 45557.35141199735 41231.566884674336 42421.26892684638 42162.627131535184 39422.136566598514 1.2038321560580394 1.0815220858436778 1.1184653680313228 1.1044721642673996 1.118931600741643 1.0296908431323357 1.1556286741342443 1.0458988394761157 1.076077367221871 1.0695165407969953 1.0 15.266718347978177 -14.999999985389726 0.04052047476478106 0.4910689394554271 1.3940697207709676 0.3703696817208888 0.043770512411865005 281.79554923620253 0.877529527537276 17.465525833589997 5.365623349846008 1.0000000336413994e-15 14.999999985389726 0.9030007813155405 Y(ph)VLARP ddPTM_A549_MK2206_60min_R1 1 YVLARP 6 1 Q13470-2;Q13470 Q13470-2 TNK1 Non-receptor tyrosine-protein kinase TNK1 1 Y(1)VLARP 78.156 0.01068 1294400.0 651.89 477.47 628.67 455.01 788.38 676.47 613.32 612.78 903.12 892.25 835.6 True False 761.9130948196915 501.7711835607388 717.8248592399426 566.4874704261753 672.4103463606707 748.0536063955559 724.7523050573297 699.6434415600443 698.5647619862897 690.6901053054627 628.0974586132123 1.2130491603993003 0.7988747234682472 1.142855856836041 0.9019101457231384 1.0705509744384216 1.190983335686785 1.1538851098960397 1.1139090470208233 1.1121916709051225 1.099654354326556 1.0 9.294844621740491 -6.96339449791983 24.975737353236497 1.0785022789097622 1.0052663001389286 0.10028238898095965 0.11390497335349467 340.5306368183503 232340.7688378299 0.0158066285678054 0.029871668646478635 1.0879413964339965e-07 6.96339449791983 -0.07323597877083365 Y(ph)VLARP ddPTM_A549_PD325901_60min_R1 1 YVLARP 6 1 Q13470-2;Q13470 Q13470-2 TNK1 Non-receptor tyrosine-protein kinase TNK1 1 Y(1)VLARP 100.78 0.007943500000000001 3025800.0 694.73 825.42 1125.7 919.57 1047.8 959.09 1072.1 1017.9 968.92 999.59 1484.9 True False 765.2584781668049 894.9810402117421 1202.0967713840091 976.3697504050033 974.2061427137646 951.279489025276 1112.8993521756304 997.5971859728975 928.1996619100631 936.4757168089031 1302.2667135566478 0.5876357509567234 0.6872486495239064 0.9230803174727069 0.7497463770216621 0.748084960302095 0.73047976971416 0.8545863459384351 0.7660467518580268 0.7127569584997205 0.7191120736329617 1.0 10.346809237711968 -10.817860033217332 0.8245808458269576 1.0173618124578463 0.7536684243997381 0.0 0.11610444729051377 0.4517694431779091 0.4845172919297613 0.07932834286633843 0.015182062263274145 1.521037659019343e-11 10.817860033217332 -0.26369338805810816 Y(ph)Y(ph)S(ph)QPRS(ph)YR ddPTM_A549_PD325901_60min_R1 1 YYSQPRSYR 9 1 A0A1W2PNU3 A0A1W2PNU3 4 Y(1)Y(1)S(1)QPRS(0.993)Y(0.007)R 43.382 0.011340000000000001 3785500.0 226.54 570.56 285.86 358.51 361.39 236.32 323.21 396.91 296.33 315.32 358.37 True False 249.5381740300664 618.6430935804943 305.2601786158237 380.65434846471504 336.007213127818 234.3954882716462 335.50993341729827 388.9933186801287 283.8762806153334 295.4106413871521 314.29276189460296 0.7939672950971368 1.9683657041645592 0.9712606067529855 1.2111457679460216 1.0690898864559182 0.7457871026321947 1.0675076683115292 1.2376782600248883 0.9032224569986451 0.9399218728626563 1.0 8.295965237288405 -6.369447953078649 1.5784522348178922 0.9751155844201727 1.347057431908689 0.12972403652797648 0.2942079888761945 0.4439295630059483 2.100308967201359 0.038671200689487734 0.1320439085022282 4.271221037395283e-07 6.369447953078649 0.37194184748851633 Y(ph)Y(ph)S(ph)QPRSYR ddPTM_A549_PD325901_60min_R1 1 YYSQPRSYR 9 1 A0A1W2PNU3 A0A1W2PNU3 3 Y(0.999)Y(0.999)S(0.999)QPRS(0.002)Y(0.001)R 43.544 0.013688999999999998 23151000.0 601.24 378.28 498.98 430.82 560.81 467.86 454.18 349.12 449.18 431.97 768.79 True False 662.2774421905056 410.1589831737754 532.8437834104938 457.43077293678965 521.4206402894697 464.0499032784889 471.46406843683206 342.1565277206584 430.30252666552656 404.69534047953874 674.2337037613412 0.9822668883146373 0.6083335509417956 0.7902953833929143 0.6784454268377936 0.773352974466606 0.6882626909478095 0.6992591230706503 0.5074746720786473 0.6382097546666711 0.6002300659576474 1.0 9.397104936696381 -10.75933186762918 1.0451298916460299 0.9974947181332873 0.6993814014957335 0.0 0.1626950127231656 0.33838715915885575 0.6650596372435226 0.07247241808923072 0.01910392500533348 1.74047637406755e-11 10.75933186762918 -0.2981133166375538 YAALS(ph)VDGEDENEGEDYAE ddPTM_A549_MK2206_60min_R1 2 YAALSVDGEDENEGEDYAE 19 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 YAALS(1)VDGEDENEGEDYAE;YAALS(1)VDGEDENEGEDYAE 201.24 1.1232e-54 29245000.0 4063.0 4126.299999999999 4644.200000000001 3527.5 5030.9 5150.5 3935.3 5360.0 6711.599999999999 6625.6 4486.9 True False 4748.735069187146 4336.311045147705 5302.817394312027 4391.7376583554915 4290.861274392932 5695.522491374803 4650.2930706517145 6119.796414311566 5191.433316222852 5128.872358320953 3372.6788978597688 1.4080009431673421 1.2857171336113369 1.5722864686813451 1.3021511360427451 1.2722412670580119 1.6887236122564357 1.3788128699719067 1.8145209193187826 1.5392610661860597 1.5207117290577612 1.0 11.719679255103204 -10.685793590673134 0.9982410607458817 1.005803272999099 1.4730937565917546 0.0 0.22208382069654756 0.33074028178847376 0.5973118684843282 0.10591355195444595 0.029346645974755066 2.0616095120035675e-11 10.685793590673134 0.46729048359265546 YAALS(ph)VDGEDENEGEDYAE ddPTM_A549_PD325901_60min_R1 2 YAALSVDGEDENEGEDYAE 19 0 E7EX17;P23588;P23588-2 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 YAALS(1)VDGEDENEGEDYAE;YAALS(1)VDGEDENEGEDYAE 245.48 1.391e-85 67810000.0 5426.6 5369.200000000001 5528.5 4809.9 6885.5 5129.6 5728.9 5255.5 5759.2 6841.1 6189.9 True False 5977.504437148226 5821.6813272090385 5903.697255571197 5106.9965989245275 6401.886233685467 5087.82623831346 5946.916424474365 5150.674929640008 5517.160852157487 6409.151778490567 5428.581541009023 1.1011171872417291 1.0724129836183596 1.0875211528044697 0.9407607789152374 1.179292635714105 0.9372294032757172 1.095482563824398 0.9488067722167143 1.016317211131363 1.180631023053452 1.0 12.406359563523065 -2.000000000000773 0.24276880550141658 0.999834948422551 1.6276775550145788 0.0 0.0865581380784192 53.6425736753746 0.6457032717366423 0.029707959822201303 13.835762498428764 0.009999999999982197 2.000000000000773 0.6278426065920277 YADEEIPRS(ph)PFK ddPTM_A549_MK2206_60min_R1 2 YADEEIPRSPFK 12 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 Y(0.014)ADEEIPRS(0.986)PFK;Y(0.001)ADEEIPRS(0.999)PFK 103.88 5.2353999999999994e-05 249810000.0 6203.799999999999 6300.5 6588.5 5501.2 8043.1 6309.7 5532.2 5098.700000000001 8095.5 8682.6 8127.8 True False 7250.849771652277 6621.168538388662 7522.848370532012 6848.994246958253 6859.970644630141 6977.388265960119 6537.3291300433075 5821.456339113875 6261.882175857039 6721.194629672414 6109.442944131719 1.1868266612779992 1.083759779563613 1.2313476759379358 1.1210505294164164 1.122847157647871 1.1420661965035754 1.0700368576684367 0.9528620518022085 1.0249514126114792 1.1001321546227547 1.0 12.5768251265103 -7.925391344895332 3.2751379489168806 1.007608892169451 1.1467966508243355 0.6008351612019673 0.04878839988045813 0.08873285006323456 1.9293234556736145 0.005941043845073308 0.008322556570642166 1.187431744610923e-08 7.925391344895332 0.13918775865488442 YADEEIPRS(ph)PFK ddPTM_A549_PD325901_60min_R1 4 YADEEIPRSPFK 12 1 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 YADEEIPRS(1)PFK;YADEEIPRS(1)PFK;YADEEIPRS(1)PFK;YADEEIPRS(1)PFK 132.44 1.6225e-08 337591000.0 8974.4 8657.099999999999 8850.400000000001 9399.0 10577.3 9831.800000000001 9280.5 10550.5 10470.5 11034.8 11294.8 True False 9885.474481395897 9386.664199095092 9451.041365778654 9979.554883322235 9834.386937704057 9751.733080522903 9633.674505984462 10340.062000792865 10030.461297144562 10338.06084478925 9905.61120363635 0.9979671398537163 0.9476108042327814 0.9541098647511197 1.0074648275775997 0.9928097050784563 0.9844655599790795 0.9725472066224383 1.0438590601049462 1.0126039767704975 1.0436570376388432 1.0 13.274030280801627 -6.918794000695466 0.7505262648554529 1.0072986776515003 0.9668987174926554 0.338278314102886 0.024253211272204683 0.658061356610263 0.6776660551084005 0.0038832016086894597 0.013952091511965563 1.205607661769262e-07 6.918794000695466 -0.04039996015884484 YADEEIPRS(ph)PFKVK ddPTM_A549_MK2206_60min_R1 2 YADEEIPRSPFKVK 14 2 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;O75369-4;O75369-5 O75369-8 FLNB Filamin-B 1 Y(0.004)ADEEIPRS(0.996)PFKVK;Y(0.021)ADEEIPRS(0.979)PFKVK 64.507 0.0010507 45348000.0 1442.65 1824.18 2131.7 1607.35 2462.69 1715.06 1636.6 1341.17 2928.8 2919.0 2969.6 True False 1686.1340505938551 1917.0229702972501 2434.007114132669 2001.150822156684 2100.4315633057154 1896.546510835311 1933.9490355064656 1531.2849546608663 2265.4314763325433 2259.595872666456 2232.1663632094237 0.7553800999713661 0.8588172467310822 1.0904237041871006 0.8965061274731404 0.9409834311299723 0.84964388949417 0.8664000440925115 0.6860084355268102 1.0149026137439374 1.0122882908322273 1.0 11.124228839800955 YADSPGAS(ph)SPEQPK ddPTM_A549_MK2206_60min_R1 3 YADSPGASSPEQPK 14 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADSPGAS(0.951)S(0.049)PEQPK;YADSPGAS(0.965)S(0.035)PEQPK;YADS(0.005)PGAS(0.498)S(0.498)PEQPK 247.17 2.1233e-58 44683500.0 7161.82 6765.21 7916.21 6589.860000000001 9849.54 7661.56 7128.43 7249.200000000001 11183.92 10600.97 11432.27 True False 8370.560126312052 7109.530292451767 9038.84761315766 8204.375995830063 8400.685713606743 8472.30119386808 8423.57345910752 8276.796299743917 8650.77997705034 8206.203514306582 8593.32184439931 0.9740773449289063 0.8273320167899213 1.0518455815836483 0.9547385917097075 0.9775830424740675 0.9859168953842796 0.9802464764656262 0.9631661014929066 1.0066863703805624 0.954951259000612 1.0 13.069000213702502 -4.835623892238648 0.36121756325076665 1.0021420565637518 0.8278648997602349 0.05999369039820801 0.050829107104041205 8.156318782848798 0.5743358610405024 0.012068664807647884 0.6570342096296498 1.4600781699895007e-05 4.835623892238648 -0.17427715680351685 YADSPGAS(ph)SPEQPK ddPTM_A549_PD325901_60min_R1 2 YADSPGASSPEQPK 14 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADSPGAS(0.5)S(0.5)PEQPK;YADSPGAS(0.991)S(0.009)PEQPK 293.29 1.3000999999999996e-116 70108000.0 13386.0 14140.4 14271.7 14796.5 16312.0 15490.8 15074.599999999999 16691.6 16550.8 16612.1 16877.300000000003 True False 14744.936865747633 15332.061133738118 15240.263384703874 15710.446199710334 15166.301393345037 15364.648060758378 15648.272152137644 16358.672943693118 15855.227432957387 15563.209170961283 14801.499094019548 0.9961786148880847 1.035845155706758 1.0296432332899041 1.0614091248404725 1.024646307580621 1.0380467521000198 1.0572086011517732 1.1052037931956997 1.0711906498284076 1.0514616845296096 1.0 13.853455678780927 -7.517346986676912 23.33438507483099 1.0428071300827815 1.0316378921647957 0.0888392474215457 0.028648291165948074 451.1388625169264 1903027.9171532937 0.005642916983328135 0.008523403825954753 3.0384564311792143e-08 7.517346986676912 -0.011169237917985742 YADSPGAS(ph)SPEQPKR ddPTM_A549_MK2206_60min_R1 1 YADSPGASSPEQPKR 15 1 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADS(0.001)PGAS(0.627)S(0.372)PEQPKR 92.977 1.0758e-05 20958000.0 2420.6 3436.7 2587.7 3230.0 3474.3 2469.7 2879.8 2256.6 4245.1 4207.6 4608.1 True False 2829.1381020119125 3611.6133506674546 2954.674770953283 4021.3501450002113 2963.2350723773798 2731.0420147458203 3403.0223832650136 2576.4799605476624 3283.5916280317124 3257.1002376948863 3463.781592909937 0.8167772782795875 1.0426792953863246 0.8530199412691747 1.160971047721822 0.8554913157466011 0.7884567607657562 0.9824587064700349 0.7438344166449453 0.9479788317926691 0.940330719570163 1.0 11.758132249149474 -9.364582577567955 2.3044504064564446 0.9831806436387065 0.9118637542727795 0.038264025723626305 0.11537156804562473 0.5553343303129121 5.993370894483131 0.022678880727573337 0.020011209086801422 4.319340310621892e-10 9.364582577567955 -0.07131688936592695 YADSPGASS(ph)PEQPKR ddPTM_A549_MK2206_60min_R1 1 YADSPGASSPEQPKR 15 1 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADSPGAS(0.169)S(0.831)PEQPKR 113.29 5.6952e-07 19130000.0 2269.7 3070.3 2520.6 2731.6 3256.8 2089.6 2305.3 2440.3 3660.2 3664.8 3701.6 True False 2652.7698711627036 3226.5651556883886 2878.058981978142 3400.8421226261817 2777.729034256871 2310.720085035779 2724.1431697134653 2786.2199981053195 2831.1705441383383 2836.9191346858606 2782.3905610371776 0.9534139125938682 1.1596377592963218 1.034383534174046 1.2222734544349758 0.9983246324777032 0.8304801336640617 0.9790657026589396 1.0013763118383763 1.01753168077273 1.0195977424637168 1.0 11.442109228238678 -6.954780526102913 24.998867630381422 0.9911515498343215 1.0952342181078807 0.30920622615786 0.08076447136065552 127.96891597119267 70744.99484670859 0.011106899924859293 0.020990060698981083 1.1097354865363306e-07 6.954780526102913 0.10408266827355916 YADSPGASS(ph)PEQPKR ddPTM_A549_PD325901_60min_R1 2 YADSPGASSPEQPKR 15 1 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 YADSPGAS(0.172)S(0.828)PEQPKR;YADSPGAS(0.182)S(0.818)PEQPKR 136.39 4.6182e-10 92178000.0 15096.9 14649.4 14874.8 15707.3 19329.8 18266.2 17952.5 17770.7 18622.699999999997 17379.2 18931.0 True False 16629.526174249615 15883.95635007377 15884.293377438788 16677.504247133456 17972.141532189853 18117.446123339298 18635.692211484955 17416.249447655537 17840.05268118371 16281.874346047165 16602.607013496465 1.0016213815535877 0.9567145892907966 0.9567348889560687 1.0045111730691516 1.0824891246043513 1.0912410387483966 1.1224557803684547 1.0490069079812376 1.0745332143729784 0.9806817888787844 1.0 14.019122177153776 -6.546745644323941 5.258708693628237 1.0507062727617653 0.9713985996598324 0.4769779413042592 0.0395602990960958 0.13616718383481166 10.517427696827578 0.006194324373900646 0.013439300112297235 2.8395816151579686e-07 6.546745644323941 -0.07930767310193287 YAEDIEGKQS(ph)EEEVKGSMK ddPTM_A549_MK2206_60min_R1 2 YAEDIEGKQSEEEVKGSMK 19 2 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 YAEDIEGKQS(0.999)EEEVKGS(0.001)MK;YAEDIEGKQS(0.993)EEEVKGS(0.007)MK 80.683 5.0731000000000006e-05 17502800.0 5519.8 5728.6 5969.2 4640.4 7421.1 5940.9 5681.3 5533.7 8352.5 8277.5 9685.1 True False 6451.407293846712 6020.161271171064 6815.722318187707 5777.298208315469 6329.466020671725 6569.562094749741 6713.5186700616405 6318.118921245501 6460.672086201709 6407.6070010265785 7280.022374838223 0.8861795969397793 0.826942687975577 0.9362227157082283 0.7935824796752569 0.8694294735340534 0.9024096021264948 0.9221837962017017 0.8678708108209492 0.8874522293408855 0.8801630916922791 1.0 12.82972716915454 -11.544822367390251 0.298243064486985 1.1029725203825298 0.86243261184624 0.0 0.05227767790527887 2.9904773729948397 0.22517601352484864 0.25558108817524294 0.01622817507043234 2.852184612967269e-12 11.544822367390251 -0.24053990853628981 YAEDIEGKQS(ph)EEEVKGSMK ddPTM_A549_PD325901_60min_R1 2 YAEDIEGKQSEEEVKGSMK 19 2 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 1 YAEDIEGKQS(1)EEEVKGSMK;YAEDIEGKQS(1)EEEVKGSMK 139.79 2.6405000000000003e-18 34582000.0 9283.6 9773.7 9931.4 9862.0 11724.2 10239.9 9654.6 9917.5 11545.5 10919.1 11402.1 True False 10226.064237774892 10597.363999803141 10605.404526359722 10471.153341772944 10900.732638294261 10156.509649428024 10022.011086199836 9719.687682371758 11060.282785557763 10229.666162534739 9999.713983867103 1.0226356728075392 1.05976671101796 1.0605707866714789 1.0471452842217719 1.090104442575138 1.0156800150298184 1.0022297740084072 0.9719965689071586 1.106059913653702 1.0229958755859043 1.0 13.287671115553684 -7.2879807474787635 24.914932813760423 1.0386046660020611 1.056008431327989 0.08901919957635929 0.03687725502862744 2555.528867344893 2398920.4049102 0.007178853489209473 0.011477334226538275 5.1525148546669864e-08 7.2879807474787635 0.0174037653259278 YAEEDRR ddPTM_A549_MK2206_60min_R1 2 YAEEDRR 7 1 P38646;H0Y8S0 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 155.73 0.0018985 10987400.0 1453.61 1852.0700000000002 1357.3 1362.84 1716.0300000000002 1292.24 1485.53 1556.6100000000001 2213.6000000000004 1986.7799999999997 1997.3000000000002 False True 1698.9438306475806 1946.33245216943 1549.785549567141 1696.7358611802124 1463.6042602111954 1428.983979080511 1755.4315719882197 1777.2642344181952 1712.2231343928293 1537.9650181213635 1501.3152873242805 1.131636935287273 1.2964181931686591 1.0322851986202357 1.130166245229022 0.9748813407606769 0.9518213736618363 1.169262437283802 1.1838047939854957 1.140482048540543 1.0244117482227215 1.0 10.552011270077386 -10.80904893436185 1.0832436000673655 1.0006864311156058 1.1123235740436828 0.14532305573366355 0.09306805145466895 0.779785704554495 1.6405295884361637 0.06473935106495324 0.016536045298878692 1.5522121037796675e-11 10.80904893436185 0.11163714292807692 YAESILENGS(ph)SSGRK ddPTM_A549_PD325901_60min_R1 1 YAESILENGSSSGRK 15 1 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;Q9Y4D8-2 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 YAES(0.001)ILENGS(0.333)S(0.333)S(0.333)GRK 48.547 0.011223 5058100.0 2217.1 2398.5 2556.5 2464.1 3010.3 2628.6 2495.9 2955.3 2619.5 2717.7 2962.6 True False 2442.1783598572447 2600.630012536483 2729.999463483361 2616.301860622866 2798.866912971222 2607.1935531095514 2590.882840308887 2896.354223112001 2509.4115245566304 2546.103958194417 2598.2189814687363 0.9399432369925632 1.0009279552974337 1.0507195440240111 1.0069597209792949 1.0772251811466107 1.0034541244232393 0.9971764731101678 1.1147460024615528 0.9658198721718582 0.9799420204201343 1.0 11.343307312894142 YAEYS(ph)FTSLPVPESNLR ddPTM_A549_MK2206_60min_R1 2 YAEYSFTSLPVPESNLR 17 0 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 Y(0.003)AEY(0.025)S(0.731)FT(0.12)S(0.12)LPVPES(0.001)NLR;YAEYS(1)FTSLPVPESNLR 148.33 1.6321000000000002e-16 5305200.0 1145.8400000000001 996.9 1181.95 1234.05 1999.8899999999999 1650.78 1467.42 1717.95 2503.7 2157.4 2204.7 True False 1339.2297789016484 1047.637951895826 1349.5682828489519 1536.3923053986093 1705.7088302382626 1825.4644439009198 1734.0312194078565 1961.4746735012218 1936.6159475873353 1670.0418416206282 1657.212143375478 0.8081221129443633 0.6321688844024241 0.8143606044909226 0.9270945253087647 1.029264018524511 1.1015273157380676 1.046354400877072 1.1835990228179292 1.1685986946986497 1.00774173559881 1.0 10.694542581612117 -6.442218892807024 1.4807131806071505 1.0887064807605555 0.71652733929914 0.8182563180564277 0.06804219638745311 0.13645386491165734 0.5725273951906885 0.011588257625884323 0.03865655228469922 3.6122775098617246e-07 6.442218892807024 -0.3721791414614155 YAGALRAS(ph)GEMASAQYITAALR ddPTM_A549_MK2206_60min_R1 2 YAGALRASGEMASAQYITAALR 22 1 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 YAGALRAS(1)GEMASAQYITAALR;YAGALRAS(0.996)GEMAS(0.004)AQYITAALR 117.52 1.2263e-15 33313000.0 4091.9 4997.6 4571.5 5153.4 6273.5 5776.9 4164.7 4909.4 6338.700000000001 8525.2 7343.5 True False 4782.512682649981 5251.956493524507 5219.8074411303205 6415.983231344919 5350.676460455195 6388.207723604133 4921.37208125002 5605.322484406935 4902.9945708239175 6599.3513989914545 5519.906279710539 0.8664119353310421 0.9514575478987873 0.9456333453190522 1.1623355372767976 0.9693419035251777 1.1573036569633801 0.8915680505916296 1.0154742128521925 0.8882387349303017 1.1955549722372318 1.0 12.430428056929179 -11.56171057790674 2.876676347078478 1.0008357704208424 0.9661111548868653 0.0 0.1121376887002064 1.4116643375826698 21.271756068114655 0.08605766337045394 0.013800341769237967 2.743401817960548e-12 11.56171057790674 -0.0347246155339771 YAGALRAS(ph)GEMASAQYITAALR ddPTM_A549_PD325901_60min_R1 4 YAGALRASGEMASAQYITAALR 22 1 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 1 YAGALRAS(1)GEMASAQYITAALR;YAGALRAS(0.999)GEMAS(0.001)AQYITAALR;YAGALRAS(0.999)GEMASAQYITAALR;YAGALRAS(1)GEMASAQYITAALR 181.37 8.052999999999998e-50 69550000.0 10276.099999999999 10069.33 10679.769999999999 10770.640000000001 12713.9 10867.37 10563.71 11090.3 10836.6 11799.699999999999 11068.000000000002 True False 11319.322107135005 10917.907777416705 11404.56341487412 11435.917970901777 11820.919524573897 10778.869741785045 10965.71776473391 10869.095266327959 10381.175387291609 11054.664928250599 9706.706165832704 1.166134208015759 1.1247798780442528 1.174915900413038 1.1781460956504322 1.2178095558494557 1.1104559628812423 1.1297053374637924 1.1197511370630366 1.069484870556092 1.1388688128999584 1.0 13.24476610508623 -8.917850055450574 0.5663971937917744 1.0079737861230194 1.1698452892466764 0.30420571623053705 0.046719287442900055 0.19094318026800872 0.13933845615663118 0.010033664786620938 0.008758284454370276 1.2082309170100132e-09 8.917850055450574 0.16187150312365706 YAHVVLR ddPTM_A549_MK2206_60min_R1 2 YAHVVLR 7 0 P62269 P62269 RPS18 40S ribosomal protein S18 0 ; 133.99 0.0060288 6316000.0 203.39 388.48 436.81 402.70000000000005 504.64 333.71 506.25 437.94 693.45 615.94 456.70000000000005 False True 237.7172595919206 408.251972667761 498.75622626274446 501.36151807789 430.40812449256566 369.0229707012297 598.2290719938584 500.0193361350008 536.3846822121006 476.7987262110914 343.28878572122323 0.6924702159800967 1.1892377195196024 1.4528765488651083 1.4604657621558135 1.2537785747597652 1.0749636633947741 1.7426408810209901 1.456555987066396 1.5624882155273376 1.3889143661054177 1.0 8.423278919051738 -5.296700620006561 3.264948358543321 1.324000094258235 0.628316831596227 0.4683515437762038 0.20511000073354538 0.2567028882208595 4.446073159048963 0.03491949680152159 0.42676465311628836 5.050093047094965e-06 5.296700620006561 -0.6956832626620081 YAHVVLR ddPTM_A549_PD325901_60min_R1 2 YAHVVLR 7 0 P62269 P62269 RPS18 40S ribosomal protein S18 0 ; 137.5 0.0059268 14060700.0 695.6600000000001 497.89 453.15 591.9100000000001 648.3499999999999 482.29 682.36 437.16 676.51 741.1600000000001 573.98 False True 766.2828910821758 539.8489376451066 483.9034840123154 628.4709363748552 602.8121326860753 478.3623901427396 708.3275832017192 428.44050085461424 648.0786373268963 694.363031112843 503.38409875900373 1.522262806813521 1.072439393647912 0.9613006950463592 1.2484918334214945 1.1975192187679193 0.9502930094972203 1.4071314229987877 0.8511204503893777 1.2874436020617437 1.379390077725262 1.0 8.9755158341563 -11.121598755510385 1.4670805031618974 0.9997704449640525 1.1707615083313005 0.0 0.2219798917159612 0.7789927373139279 2.993922472983547 0.12949457176881124 0.027796523607360426 7.557901794267845e-12 11.121598755510385 0.170991063367248 YALPLVGHR ddPTM_A549_MK2206_60min_R1 1 YALPLVGHR 9 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 73.931 0.0023573 781170.0 187.38 0.0 171.92 0.0 85.241 0.0 120.06 140.34 127.88 135.37 138.27 False True 219.00516299883998 0.0 196.30084114166567 0.0 72.70216181806992 0.0 141.8733479181879 160.23362477322473 98.91538418239737 104.78982298145189 103.93374294213606 2.1071613202727493 0.0 1.8887113615349536 0.0 0.6995048937912881 0.0 1.3650364540144992 1.5416901213923662 0.9517157891395039 1.0082367863898873 1.0 6.699520302843826 YALPLVGHR ddPTM_A549_PD325901_60min_R1 2 YALPLVGHR 9 0 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 126.28 6.7943e-05 5151100.0 325.86 561.52 363.58 288.99 565.4300000000001 413.08000000000004 449.69 541.25 329.35 383.34 370.64 False True 358.94106731454673 608.8412610546117 388.2547251841501 306.84025595609035 525.7161474276048 409.71601343623746 466.80319902981006 530.4543441475894 315.50856484547654 359.1358469787863 325.05362968054135 1.1042518358195523 1.8730486463202187 1.1944328250255873 0.9439680961497003 1.6173212646303077 1.260456663224777 1.4360805615017387 1.6318979261019584 0.9706354153176336 1.1048510589829146 1.0 8.344533953734821 -8.784818205167532 24.920375444655672 0.9861333027593349 1.3836560459459242 0.2828799330809484 0.2514284863435023 171.30913931621905 182604.05672560626 0.04087664086699908 0.043529220714488163 1.6412766646699618e-09 8.784818205167532 0.3975227431865893 YALS(ph)PK ddPTM_A549_MK2206_60min_R1 2 YALSPK 6 0 Q52LJ0-1;Q52LJ0 Q52LJ0-1 FAM98B Protein FAM98B 1 YALS(1)PK;YALS(1)PK 67.98100000000001 0.054007000000000006 6103700.0 3546.8 3734.2 3440.3 3335.6 4865.0 3455.6000000000004 3072.9 3527.9 4864.200000000001 4785.5 5425.0 True False 4145.4131290654595 3924.2548299422183 3928.1862714034 4152.822149740772 4149.364944626531 3821.269298358365 3631.2061537381287 4027.990628740626 3762.4664665312594 3704.452226325906 4077.8227776168937 1.0165751076333107 0.9623407008961724 0.9633048039667526 1.018392013634224 1.0175442070220244 0.9370856721222054 0.8904766959637783 0.9877797168749473 0.9226655182720004 0.9084387498788783 1.0 11.99358336177995 -7.265737363771387 24.91740366656546 0.9569221252032494 0.9932504451660523 0.30843258683839936 0.03662960416352436 510.8308003407659 2961517.0499593387 0.005966263422206826 0.009747716711878693 5.423287603760781e-08 7.265737363771387 0.036328319962802946 YALS(ph)PK ddPTM_A549_PD325901_60min_R1 1 YALSPK 6 0 Q52LJ0-1;Q52LJ0 Q52LJ0-1 FAM98B Protein FAM98B 1 YALS(1)PK 65.252 0.05756 5198700.0 2324.9 2501.5 2815.6 2473.7 3290.2 3207.8 3220.1 3009.2 3266.2 3059.3 3332.9 True False 2560.9221364990785 2712.310184015015 3006.6835475782304 2626.494830819685 3059.107702573801 3181.6767403427 3342.6426676063315 2949.179145328268 3128.9329725164575 2866.1352758965954 2922.974428993838 0.8761356620490904 0.9279281259222856 1.0286383342098573 0.8985692125003608 1.046573542426378 1.0885065256755988 1.1435757475158461 1.0089650857272296 1.0704619723934827 0.9805543447341043 1.0 11.513221492757422 -6.775212675046785 24.809491831720912 1.0456197334139468 0.9393128949581205 0.5022211061195727 0.05516174159424485 143.91519428328786 259230.80323970286 0.008017655952161007 0.015209179747346245 1.6779821050413752e-07 6.775212675046785 -0.10630683845582622 YALYDASFETK ddPTM_A549_MK2206_60min_R1 1 YALYDASFETK 11 0 F6RFD5;P60981;P60981-2 F6RFD5 DSTN Destrin 0 171.85 1.0956e-14 2941900.0 2923.7 3927.9 3899.5 3812.2 4640.1 3911.5 3600.4 3372.9 5154.7 4993.0 4178.3 False True 3417.1490823978484 4127.813332582625 4452.507736342048 4746.189171136163 3957.5474367033007 4325.41233375644 4254.546075667529 3851.0189040730343 3987.168680364435 3865.077832210899 3140.712794786483 1.0880170539854024 1.3142918828600654 1.4176742756399492 1.5111821682691704 1.260079381748228 1.3772072189907123 1.354643469065362 1.226160797149502 1.2695107578709683 1.2306371466460884 1.0 11.61687630518079 -10.283680326134174 0.4906274397392846 0.9642483214418682 1.3399427035039675 0.21934909141862946 0.12196603395074614 0.6699030801182835 0.2700501236033167 0.11523545123411706 0.02745866691384494 5.203788941548957e-11 10.283680326134174 0.37569438206209926 YALYDASFETK ddPTM_A549_PD325901_60min_R1 2 YALYDASFETK 11 0 F6RFD5;P60981;P60981-2 F6RFD5 DSTN Destrin 0 ; 185.29 3.1885000000000004e-18 14622600.0 15318.2 14067.599999999999 16191.9 16903.1 18570.300000000003 18693.7 17033.5 19647.9 20516.5 18886.1 18225.3 False True 16873.29238733718 15253.126022246493 17290.779703804506 17947.166097274618 17265.986192057106 18541.46470507648 17681.719163588852 19256.007221020627 19654.262853050626 17693.628422878 15983.703639695585 1.055655983600215 0.9542923446331488 1.0817755442401218 1.122841520453543 1.080224369849862 1.1600230536700322 1.1062341721399438 1.2047274933951018 1.2296438482655043 1.1069792597340087 1.0 13.964314118448998 -5.9482400971411 5.4455125330231695 1.119285734658114 1.0056728846357064 0.3562860425329658 0.062103590739319765 0.22692944074955507 14.682802813343477 0.01210704231965748 0.03861826982921086 1.1265744639392784e-06 5.9482400971411 -0.11361285002240762 YALYDATYETK ddPTM_A549_MK2206_60min_R1 2 YALYDATYETK 11 0 Q9Y281;Q9Y281-3;P23528;E9PP50;G3V1A4;E9PK25;E9PQB7;E9PLJ3 Q9Y281;P23528 CFL2;CFL1 Cofilin-2;Cofilin-1 0 ; 247.51 1.0609e-50 18400700.0 12568.7 12951.1 13706.4 12013.7 17197.0 14119.2 14254.400000000001 13653.8 20051.5 19116.2 19405.6 False True 14689.989284787709 13610.255671379313 15650.173621592176 14957.057039315485 14667.344080728155 15613.284372433562 16844.23996805778 15589.267963008817 15509.867265665785 14797.837143222501 14586.65395268615 1.007084238265797 0.9330622167034385 1.0729104613268883 1.0253932867558788 1.0055317777677961 1.0703814886592518 1.1547706569782505 1.0687350240551936 1.0632916442642848 1.0144778364675924 1.0 13.832361359481297 -5.765383299153917 24.997620903884577 1.0442871658052644 0.970073224960088 0.32299149525157744 0.04483730677350229 93.53855599401014 592892.4235193717 0.006801963322545032 0.02235376112343553 1.7163928663138352e-06 5.765383299153917 -0.07421394084517641 YALYDATYETK ddPTM_A549_PD325901_60min_R1 2 YALYDATYETK 11 0 Q9Y281;Q9Y281-3;P23528;E9PP50;G3V1A4;E9PK25;E9PQB7;E9PLJ3 Q9Y281;P23528 CFL2;CFL1 Cofilin-2;Cofilin-1 0 ; 226.09 3.6851999999999996e-39 23954000.0 16789.2 18333.9 19431.7 19164.5 22535.0 21139.9 20536.8 21010.0 20471.9 22633.0 22147.0 False True 18493.62722444421 19878.962095827654 20750.45201430455 20348.247639262576 20952.219341529584 20967.743663311514 21318.33916216816 20590.939067973843 19611.537235949938 21203.948517428056 19423.059401400144 0.9521480031673624 1.023472239105372 1.068341067463796 1.0476334968010106 1.0787290976425274 1.0795283703760912 1.0975788479868105 1.0601285123233217 1.0097038180574276 1.0916894233407706 1.0 14.245482842695523 -8.80447057521209 5.97770181761873 1.0043649896030045 1.0539424568055091 0.0 0.045138211995918165 0.190517204884616 16.52821899193629 0.006598935463244988 0.0070555051161618155 1.5686621757706787e-09 8.80447057521209 0.049577467202504666 YAPS(ph)EAGLHEMDIR ddPTM_A549_MK2206_60min_R1 4 YAPSEAGLHEMDIR 14 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5F3 Q60FE5 FLNA Filamin-A 1 YAPS(1)EAGLHEMDIR;YAPS(1)EAGLHEMDIR;YAPS(1)EAGLHEMDIR;YAPS(1)EAGLHEMDIR 101.9 8.779500000000001e-06 61166900.0 4513.68 5209.08 4602.68 4303.15 6047.85 4683.660000000001 5283.389999999999 5032.32 7229.84 7120.200000000001 7085.3 True False 5275.478835119035 5474.199922220398 5255.409233980468 5357.421943175744 5158.219276538452 5179.2817924381125 6243.313573692112 5745.666770833653 5592.292783682074 5511.741874806337 5325.824465668014 0.990546885111681 1.027859622018874 0.9867785293823584 1.005932880009737 0.9685297196312045 0.9724845093610269 1.1722717513388827 1.0788314199748936 1.050033252078021 1.0349086625623518 1.0 12.378789164077393 YAPS(ph)EAGLHEMDIR ddPTM_A549_PD325901_60min_R1 3 YAPSEAGLHEMDIR 14 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5F3 Q60FE5 FLNA Filamin-A 1 YAPS(1)EAGLHEMDIR;YAPS(1)EAGLHEMDIR;YAPS(1)EAGLHEMDIR 130.29 3.0220999999999997e-09 70407000.0 5373.09 5757.0 5892.6 6567.4 6176.049999999999 5528.280000000001 5593.4 6313.45 5660.0 6451.04 7436.799999999999 True False 5918.562141340201 6242.162594193259 6292.507271082357 6973.053382352427 5742.265554215828 5483.259520575392 5806.259897825921 6187.523286944288 5422.129883180193 6043.720233458624 6522.120745759359 0.907459762254235 0.957075595120172 0.9647946605670716 1.0691389586563944 0.8804292005709051 0.8407172657974129 0.8902410924546458 0.9486980582147878 0.8313446031654086 0.9266495468346261 1.0 12.67112543499344 YARS(ph)EIVGVSR ddPTM_A549_MK2206_60min_R1 1 YARSEIVGVSR 11 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 Y(0.014)ARS(0.985)EIVGVS(0.001)R 44.511 0.050604 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YARS(ph)EIVGVSR ddPTM_A549_PD325901_60min_R1 3 YARSEIVGVSR 11 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 Y(0.008)ARS(0.99)EIVGVS(0.002)R;Y(0.003)ARS(0.996)EIVGVSR;YARS(1)EIVGVSR 68.42 0.0011445000000000001 20612700.0 6648.01 8182.9 8281.6 8234.21 7541.96 8738.85 8452.300000000001 8342.05 8266.4 8788.900000000001 8760.2 True False 7322.9110811937 8872.50170089005 8843.639177306399 8742.818450452265 7012.238747949522 8667.683702956483 8773.95690177603 8175.661268538373 7918.99195518035 8233.967354076942 7682.750935483166 0.9531626292051811 1.1548599942127449 1.1511031987854263 1.1379802005650248 0.9127249870307717 1.128200533343383 1.1420332346390503 1.0641580518741895 1.0307495351184812 1.071747271676862 1.0 12.907407268831752 -8.81297608904679 2.35845077429751 1.0124296985235923 1.0862876639142571 0.050667468010560324 0.07871338903316713 0.3953165496532924 4.290383893967446 0.013877125726403058 0.014773551126185688 1.538239328821191e-09 8.81297608904679 0.0738579653906648 YAS(ph)GSSASLGGPESAVA ddPTM_A549_MK2206_60min_R1 2 YASGSSASLGGPESAVA 17 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 YAS(0.461)GS(0.461)S(0.078)AS(0.001)LGGPESAVA;YAS(0.682)GS(0.159)S(0.159)AS(0.001)LGGPESAVA 92.039 5.0159e-06 4257800.0 2443.1 2515.3999999999996 2091.27 2328.7 3060.9 2608.8 2332.0 2359.9 3458.8999999999996 2886.1000000000004 3663.5 True False 2855.4355519397272 2643.4231158579205 2387.8435321913166 2899.231604539317 2610.6456647497116 2884.8614844187127 2755.6942141030677 2694.4230518906456 2675.4646727282948 2234.1280055164993 2753.751842543686 1.0369255166079578 0.9599351237895667 0.8671237165603224 1.0528296557983412 0.9480322897716938 1.0476112770400976 1.0007053546108888 0.9784552878961535 0.9715707244908909 0.8113033175323446 1.0 11.427182839900183 -6.294389692154756 24.999547555489844 0.9918924727763921 0.9551886665813012 0.0 0.07170006988429779 1002.8599144749771 760872.6044485306 0.006135387189061604 0.014258416862211652 5.07703675935012e-07 6.294389692154756 -0.03670380619509095 YASGSSAS(ph)LGGPESAVA ddPTM_A549_MK2206_60min_R1 2 YASGSSASLGGPESAVA 17 0 Q15149;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;H0YDN1;Q15149-4 Q15149;Q15149-3;Q15149-4 PLEC Plectin 1 YAS(0.001)GS(0.002)S(0.014)AS(0.983)LGGPESAVA;YAS(0.001)GS(0.005)S(0.026)AS(0.968)LGGPESAVA 86.46700000000001 2.1438e-05 2892400.0 1700.87 2317.23 2084.37 2346.0 2414.0 2526.7 1911.74 1861.31 3523.1000000000004 3268.8 2870.1000000000004 True False 1987.9352737209792 2435.167109310429 2379.9650084367927 2920.770105315943 2058.9037978064644 2794.0737169122835 2259.0784120366193 2125.15639252281 2725.12347523463 2530.3758097198033 2157.3749592697245 0.921460252043483 1.1287639632819033 1.10317633854544 1.3538537159551667 0.9543560283574475 1.2951266097285576 1.047142223622231 0.9850658474510985 1.2631663603609682 1.1728956984725272 1.0 11.075061228367957 -5.260972698848693 23.04144352578065 1.1262213998298265 0.9214601479258501 0.18547429714140484 0.1255762527664104 17.791419638030693 877516.7529510831 0.01762492922088125 0.14363860106329082 5.483114324618837e-06 5.260972698848693 -0.20476125190397643 YAT(ph)LPNIMK ddPTM_A549_MK2206_60min_R1 1 YATLPNIMK 9 0 P38117-2;P38117;M0QY67 P38117-2 ETFB Electron transfer flavoprotein subunit beta 1 YAT(1)LPNIMK 95.573 0.00097058 1954500.0 2153.2 2893.3 2836.4 2171.7 2994.3 2799.5 2596.0 2556.3 3730.0 3937.6 3688.5 True False 2516.607519314241 3040.5566117165176 3238.644170627154 2703.766597491317 2553.8424365252245 3095.741231842296 3067.6595968317165 2918.66335334042 2885.160955586037 3048.0934252180305 2772.5436525787845 0.9076890518832793 1.0966668131224733 1.1681129592368518 0.9751935176842043 0.9211189277939257 1.116570781117513 1.1064423075822234 1.0527023986171427 1.0406187664178002 1.0993851881765515 1.0 11.436994459877983 -10.2239902035326 0.9242679765897596 1.0030206808586173 1.0463274924289554 0.0 0.08262977486735075 1.4578833804063207 2.4493424810641566 0.03510778829095373 0.014743249149627682 5.970487541799795e-11 10.2239902035326 0.04330681157033811 YAT(ph)LPNIMK ddPTM_A549_PD325901_60min_R1 5 YATLPNIMK 9 0 P38117-2;P38117;M0QY67 P38117-2 ETFB Electron transfer flavoprotein subunit beta 1 YAT(1)LPNIMK;Y(0.001)AT(0.999)LPNIMK;Y(0.005)AT(0.995)LPNIMK;Y(0.003)AT(0.997)LPNIMK;Y(0.002)AT(0.998)LPNIMK 105.86 0.0005836 14435500.0 15621.900000000001 15236.4 15483.400000000001 17502.800000000003 20088.1 18769.3 18383.6 19051.899999999998 20647.5 18684.4 20101.4 True False 17207.82378776506 16520.42490015045 16534.1966332479 18583.90820425709 18677.181156182836 18616.449043741577 19083.197957891924 18671.89490857358 19779.75737861539 17504.66379530035 17629.055233273346 0.9761058411846572 0.9371134573887743 0.9378946525756529 1.0541635929066433 1.0594544579411858 1.0560094569676433 1.0824855731278218 1.0591545979918404 1.1219975839251317 0.9929439532449692 1.0 14.105667540152323 -6.275279830180908 10.096117272514814 1.0604946859744966 0.949026736492106 0.6260053840514597 0.03509849097874634 0.1940025797045844 138.21170206243926 0.006090422558519068 0.014548595591495933 5.305424881474909e-07 6.275279830180908 -0.11146794948239058 YAT(ph)SPKPNNSYMFK ddPTM_A549_MK2206_60min_R1 2 YATSPKPNNSYMFK 14 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 Y(0.001)AT(0.494)S(0.494)PKPNNS(0.007)Y(0.006)MFK;Y(0.005)AT(0.48)S(0.48)PKPNNS(0.018)Y(0.018)MFK 57.52 0.0033790999999999995 29510000.0 5218.799999999999 6976.7 7389.3 6017.2 8350.2 7004.9 6584.2 6285.0 9362.8 9655.0 10542.1 True False 6099.60585259017 7331.78423010494 8437.213852071376 7491.414270122367 7121.896641443056 7746.1538685237065 7780.463912734742 7175.917997005254 7242.140749319283 7473.928794311279 7924.205622841486 0.7697435103157955 0.9252390181510569 1.064739388860777 0.9453836291840283 0.8987521248709426 0.9775306494061 0.9818604265274983 0.9055693830458795 0.9139264039847534 0.9431770388148073 1.0 12.952050601437293 -13.74233866124783 0.008031920885691459 1.9887001361209973 5.771624285286013e-07 0.08715542013190825 0.06762880640300165 22944.121279813062 17.83904067013075 2427.111550201634 2007.9321211017482 1.809928166822215e-14 13.74233866124783 -1.9886995589585688 YAT(ph)SPKPNNSYMFK ddPTM_A549_PD325901_60min_R1 1 YATSPKPNNSYMFK 14 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 Y(0.001)AT(0.449)S(0.449)PKPNNS(0.053)Y(0.047)MFK 43.45399999999999 0.019729 23079000.0 3274.2 2870.0 2815.1 2802.2 3595.4 3575.8 3071.4 3210.9 3333.9 3885.7 3181.5 True False 3606.594373661354 3111.8649722658743 3006.149614571489 2975.285529742055 3342.8715074566417 3546.679870352711 3188.2838077345677 3146.85608059768 3193.7877769495494 3640.3562388622913 2790.1956691901646 1.2925955027047058 1.115285571771055 1.0773974197458358 1.0663357995267808 1.1980778066460434 1.2711222763033356 1.1426739145717137 1.1278263081495763 1.1446465250505262 1.304695681044792 1.0 11.446150582727986 -10.491213566075647 0.5908686770739505 0.9853754432882018 1.1599243387160911 0.0 0.11276655886864505 0.8014446753381077 0.44758227898590697 0.07249195904796316 0.015553199792243528 3.22690688691021e-11 10.491213566075647 0.17454889542788932 YATS(ph)PKPNNSYMFK ddPTM_A549_MK2206_60min_R1 1 YATSPKPNNSYMFK 14 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 Y(0.001)AT(0.145)S(0.854)PKPNNSYMFK 91.65700000000001 1.7925e-05 18846000.0 3474.0 3787.8 4457.0 3642.6 5413.6 4153.6 3691.8 4349.3 6268.5 6317.4 6490.5 True False 4060.3262688545724 3980.5828409981045 5089.069619406722 4535.037163522529 4617.266611352554 4593.131195063467 4362.55227256677 4965.826594172627 4848.694758737552 4890.2949523751495 4878.729721312893 0.8322507088508925 0.8159055878026602 1.0431136607496316 0.9295528595714307 0.9464075435828861 0.9414604738192855 0.8941983921570434 1.0178523668731325 0.9938436920487452 1.0023705414570792 1.0 12.252289845703793 -3.037251632958534 0.35837540233852316 0.9949253911587347 3.187263610124188e-16 0.4596426979544732 0.05235711778150729 15.729927794573568 0.38593113930424455 0.013061928137319975 9.544081206350498 0.0009178006629101064 3.037251632958534 -0.9949253911587344 YATS(ph)PKPNNSYMFK ddPTM_A549_PD325901_60min_R1 3 YATSPKPNNSYMFK 14 1 Q6P1L5 Q6P1L5 FAM117B Protein FAM117B 1 YAT(0.145)S(0.852)PKPNNS(0.001)Y(0.001)MFK;YAT(0.179)S(0.821)PKPNNSYMFK;YAT(0.017)S(0.983)PKPNNSYMFK 136.63 1.0492e-09 73147000.0 19485.300000000003 17566.2 19140.2 18988.1 22117.9 21695.0 20380.5 21191.9 20544.3 20647.1 22621.4 True False 21463.4333116803 19046.56532258426 20439.169071372675 20160.951811896044 20564.415006612693 21518.323112954316 21156.091080137518 20769.210929776065 19680.894515727712 19343.43858234386 19839.111208869534 1.0818747415501444 0.9600513411139635 1.0302462069084461 1.0162225313240154 1.0365592888767565 1.0846414885427957 1.0663830076560687 1.0468821264780606 0.9920250110261448 0.9750153814197043 1.0 14.276059774060611 -8.764649095619857 24.998195507259137 0.9962340304242482 1.038756203483563 0.31620592380507584 0.03310525554278 83.45680218021872 649985.094213831 0.005628165202525222 0.006115270144995972 1.719296996049778e-09 8.764649095619857 0.042522173059314716 YATVS(ph)SPSK ddPTM_A549_MK2206_60min_R1 1 YATVSSPSK 9 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 YATVS(0.677)S(0.318)PS(0.005)K 61.65 0.012062 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YAVLYQPLFDKR ddPTM_A549_PD325901_60min_R1 1 YAVLYQPLFDKR 12 1 P55209;F8W118;P55209-2;F8W0J6;H0YIV4;B7Z9C2;H0YHC3;F8VV59;F5H4R6;F8VY35;F8W020;H0YH88;F8VRJ2;F8W543;F8VVB5 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 56.403999999999996 0.016597 1477900.0 1472.2 1650.8 1779.5 1717.5 1703.6 2524.6 2049.8 2149.5 2019.8 2405.0 2052.6 False True 1621.6566602236412 1789.9187094831045 1900.2675710027925 1823.586074274492 1583.945013100945 2504.040494628463 2127.8062606936 2106.626536249872 1934.9148300437023 2253.1478895601313 1800.143212503452 0.9008486930150461 0.994320172445542 1.0556202183270174 1.013022775970384 0.8798994447214891 1.3910229348620011 1.1820205447623626 1.1702549672812947 1.0748671642367964 1.2516492431880946 1.0 10.813895971077969 -4.927240323308894 0.8390365964154813 1.07184117681747 0.7123335577063151 0.15149878044726783 0.13481825639159073 5.995370569798549 2.109200870528362 0.020153902469061475 2.270600860360122 1.182387083187938e-05 4.927240323308894 -0.3595076191111549 YDDRGS(ph)RDYDR ddPTM_A549_MK2206_60min_R1 2 YDDRGSRDYDR 11 2 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 YDDRGS(1)RDYDR;YDDRGS(0.997)RDY(0.002)DR 105.03 6.0056e-05 84184000.0 2251.7 2255.37 2312.46 1987.27 2663.01 2191.86 2019.29 2020.0 2944.4 2981.3 2720.5 True False 2631.7319112204505 2370.1586995358525 2640.401600200419 2474.151239211941 2271.2847566680157 2423.8011703610855 2386.1688548868697 2306.341185990552 2277.498101240623 2307.8222593972255 2044.9247680196802 1.2869578149659944 1.1590444482860518 1.2911974276478655 1.209898416755902 1.1106935532242315 1.1852764503939732 1.1668736631312127 1.127836692116566 1.1137319753069295 1.1285609600357753 1.0 10.997832052620597 -14.946577424489433 0.038107138040142 3.811601968457596e-08 1.7728257871156887 0.4922638042807087 0.05629811687756625 182.81901648475514 0.5409801882759927 21.638189422537735 7.1896844725344655 1.1308957592515093e-15 14.946577424489433 1.772825748999669 YDDRGS(ph)RDYDR ddPTM_A549_PD325901_60min_R1 2 YDDRGSRDYDR 11 2 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 YDDRGS(1)RDYDR;YDDRGS(1)RDYDR 83.087 0.0002097 103983000.0 3701.4 3809.9 4652.6 3866.7 4678.9 4670.9 3953.0 4627.2 4808.0 4964.2 4465.1 True False 4077.1634031733347 4130.973643845214 4968.35341435661 4105.537277087146 4350.27020532872 4632.861739031959 4103.433578164602 4534.906866031823 4605.936480270388 4650.759564804329 3915.9210066009778 1.0411761106264796 1.0549175115845613 1.2687573130258685 1.048421883425773 1.1109187846219497 1.183083553325629 1.047884666531204 1.1580690362209642 1.1762077101418202 1.18765408111263 1.0 11.935135947322163 -10.936878418948899 1.1931926193885152 0.9999412099641678 1.1265502558928076 0.0 0.08779646957617125 0.45223145926685915 1.1433494477228987 0.04681393521766389 0.010964217501331069 1.156435941949786e-11 10.936878418948899 0.12660904592863975 YDDS(ph)VPR ddPTM_A549_PD325901_60min_R1 1 YDDSVPR 7 0 H7BZ97;P23229-5;P23229-3;P23229 H7BZ97 ITGA6 Integrin alpha-6;Integrin alpha-6 heavy chain;Integrin alpha-6 light chain;Processed integrin alpha-6 1 YDDS(1)VPR 90.65700000000001 0.012502 2772200.0 925.22 1017.9 1035.4 1153.5 868.56 1155.2 981.17 1079.8 1265.5 1168.6 1177.2 True False 1019.1476532890352 1103.6820053203603 1105.6684703659969 1224.7490752114268 807.5553419693337 1145.7924342053393 1018.5089612668257 1058.2625419132871 1212.315435894795 1094.8143965654765 1032.41186288564 0.9871522111732322 1.0690326651570208 1.0709567664939468 1.1862989173605534 0.7822026954554535 1.1098210659869747 0.9865335704493409 1.0250391146759912 1.174255623629039 1.0604434489016994 1.0 10.011802908529308 YDDYRDYDS(ph)PER ddPTM_A549_MK2206_60min_R1 3 YDDYRDYDSPER 12 1 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3 P52756 RBM5 RNA-binding protein 5 1 YDDYRDY(0.001)DS(0.999)PER;YDDYRDYDS(1)PER;YDDYRDYDS(1)PER 107.53 0.00010718 32431800.0 2000.9299999999998 2110.74 1943.0400000000002 1715.1200000000003 2740.8900000000003 1955.33 1649.82 2022.48 3523.13 2502.17 2510.12 True False 2338.6380659583133 2218.167650300528 2218.5922892735107 2135.324476994662 2337.708711835027 2162.241722756992 1949.570938384015 2309.1727335852333 2725.14668028253 1936.9280591674637 1886.787928212299 1.2394811472925498 1.1756316738798545 1.175856733075238 1.1317246867367057 1.2389885884260283 1.1459908612017045 1.0332750751862199 1.2238644836853165 1.4443312041245473 1.02657433313275 1.0 10.881716560218255 YDDYRDYDS(ph)PER ddPTM_A549_PD325901_60min_R1 4 YDDYRDYDSPER 12 1 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3 P52756 RBM5 RNA-binding protein 5 1 YDDYRDY(0.001)DS(0.999)PER;YDDYRDYDS(1)PER;YDDYRDY(0.007)DS(0.993)PER;YDDY(0.001)RDY(0.001)DS(0.998)PER 96.464 0.00021297 35983400.0 3988.7900000000004 4731.85 4852.04 5015.2699999999995 5237.35 4842.14 4239.969999999999 4331.37 5263.17 4228.969999999999 5229.93 True False 4393.7290244079995 5130.619605929017 5181.328612086757 5325.051837395412 4869.496603876635 4802.7072172463995 4401.32437855061 4244.9774274559695 5041.977268066696 3961.9521124794665 4586.681765257806 0.957931953703145 1.1185907086014366 1.1296464148293768 1.1609813171976417 1.0616600089330448 1.0470984173405917 0.9595879120912203 0.9255007529865918 1.0992646811160005 0.8637948554638334 1.0 12.1632350979875 -7.102437628160338 3.6088923146579286 1.0306685126957462 1.09751605286941 0.17093867386670336 0.08264302721291551 0.36105959251799763 8.67330556244353 0.01069369883840861 0.01937725388553274 7.898822813579067e-08 7.102437628160338 0.06684754017366368 YDDYRDYDS(ph)PERER ddPTM_A549_MK2206_60min_R1 6 YDDYRDYDSPERER 14 2 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3 P52756 RBM5 RNA-binding protein 5 1 YDDYRDYDS(1)PERER;Y(0.001)DDYRDY(0.001)DS(0.999)PERER;YDDYRDYDS(1)PERER;YDDYRDYDS(0.999)PERER;Y(0.004)DDY(0.03)RDY(0.028)DS(0.938)PERER;YDDYRDYDS(1)PERER 126.84 3.4879e-08 496208900.0 10764.1 11493.72 10498.01 10360.140000000001 13808.31 12383.21 10665.720000000001 11128.48 16316.080000000002 15823.27 15128.439999999999 True False 12580.816923021735 12078.70125435259 11986.785675393312 12898.37476508436 11777.125890757656 13693.59306289046 12603.54326468411 12705.976119540659 12620.513931425787 12248.782317261717 11371.630824296873 1.1063335696882886 1.0621784545225452 1.0540955699847454 1.134259013889671 1.0356584796610169 1.2041890274552733 1.108332081776266 1.1173398359356508 1.1098244505493902 1.0771350658949201 1.0 13.473151547887738 -10.618327667171695 0.8602860515382363 0.9988954689756842 1.1032799975425347 0.15122377851211544 0.048103983936213804 0.44956563524627025 0.5841855287961499 0.029737099178039177 0.007753608057800024 2.4080878852531448e-11 10.618327667171695 0.10438452856685054 YDDYRDYDS(ph)PERER ddPTM_A549_PD325901_60min_R1 6 YDDYRDYDSPERER 14 2 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-4;P52756-2;P52756-5;P52756-3 P52756 RBM5 RNA-binding protein 5 1 YDDYRDY(0.001)DS(0.999)PERER;Y(0.001)DDY(0.006)RDY(0.005)DS(0.988)PERER;YDDYRDYDS(1)PERER;YDDYRDYDS(1)PERER;YDDYRDYDS(1)PERER;YDDYRDYDS(1)PERER 117.3 1.0962e-06 627813000.0 13537.869999999999 11873.140000000001 12543.16 11743.699999999999 15400.869999999999 13354.690000000002 12185.27 12976.71 13891.16 14762.300000000001 14254.75 True False 14912.224596346838 12873.731176588457 13394.414265748455 12469.081677122173 14319.166021317187 13245.933832373368 12648.987117885594 12717.879339017938 13307.362853010147 13830.205858650115 12501.506118305359 1.1928342437485655 1.0297744171590708 1.0714240459504039 0.9974063572119756 1.1453952736422948 1.0595470423342017 1.0117970585451528 1.0173077722527972 1.0644607719324963 1.106283173224961 1.0 13.609814293518149 -7.538068966787867 10.911879974979868 1.0290374914162752 1.0806963884044571 0.12123306051299299 0.05630828887297477 0.49545915081431763 346.7119139886033 0.007715055524269848 0.011510337663098103 2.8968835205721757e-08 7.538068966787867 0.051658896988181935 YDDYS(ph)SSRDGYGGSR ddPTM_A549_MK2206_60min_R1 1 YDDYSSSRDGYGGSR 15 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 YDDY(0.002)S(0.442)S(0.442)S(0.093)RDGY(0.001)GGS(0.02)R 44.382 0.015653 9395700.0 1537.3 1494.0 1706.6 1253.1 1847.7 1582.8 1342.6 1635.8 2277.4 2436.6 2413.3 True False 1796.7586566235293 1570.0382186100567 1948.6215419518753 1560.1095562537957 1575.9057776333905 1750.2908454223925 1586.5330411041075 1867.679659427398 1761.572536260492 1886.1703677078058 1814.0110063083596 0.990489390844469 0.8655064457437859 1.0742060192443141 0.8600331259448799 0.8687410231542475 0.9648733328164077 0.8745994569971294 1.0295856270620198 0.9710925292815155 1.0397788994380446 1.0 10.824967493945456 -8.268969085048553 24.99304699534142 0.989210559429411 0.9280271663177518 0.24855827359483473 0.0647799106425448 720.7527666381945 2392360.6378331846 0.009560399967234312 0.011670746799316494 5.38308100241181e-09 8.268969085048553 -0.06118339311165921 YDDYSS(ph)SR ddPTM_A549_MK2206_60min_R1 1 YDDYSSSR 8 0 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 YDDYS(0.05)S(0.681)S(0.269)R 75.378 0.0048503 5315700.0 1315.3 1817.0 1188.6 1326.4 2669.0 1984.0 1631.3 1940.7 2651.6 2268.4 2198.2 True False 1537.290484002424 1909.4775389655106 1357.1613528442522 1651.3680595443593 2276.3936356029217 2193.9455631273863 1927.686094110777 2215.8001681444866 2051.016833735103 1755.9668645277786 1652.3262727663516 0.9303794954665141 1.1556298356066397 0.8213640218720668 0.9994200823180109 1.3776901530420782 1.32779197382987 1.1666497869596986 1.3410185413530693 1.2412904566973064 1.0627240475865039 1.0 10.690282877972047 -6.556594155190755 24.994592243596674 1.1702824534511325 0.9748776728193063 0.3968849883523914 0.1351148148654794 192.20270299689466 142487.02294985944 0.02233201720193523 0.04648798806827624 2.7759129619932753e-07 6.556594155190755 -0.1954047806318262 YDDYSS(ph)SRDGYGGSR ddPTM_A549_MK2206_60min_R1 3 YDDYSSSRDGYGGSR 15 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 YDDYS(0.031)S(0.932)S(0.036)RDGYGGS(0.001)R;YDDYS(0.087)S(0.533)S(0.38)RDGYGGSR;YDDYS(0.33)S(0.372)S(0.296)RDGYGGS(0.001)R 80.975 0.00010159 38999900.0 7247.6 8170.699999999999 7278.2 7077.7 9517.4 7385.4 6095.92 6556.2 11071.8 11103.1 10807.5 True False 8470.817693192403 8586.553730118596 8310.35820147319 8811.736817730027 8117.403067623548 8166.91812596825 7203.469757133435 7485.561427520422 8564.054978031494 8594.901998562149 8123.699478174117 1.042729081245667 1.0569757969491642 1.0229770591342733 1.08469507536615 0.9992249331025248 1.0053200697428861 0.8867228257873084 0.9214473587596174 1.0542062764680644 1.058003440631206 1.0 12.987921155344011 -6.788001860618963 24.912961429947078 1.004372085596766 1.050148862149005 0.22889464321760444 0.05059423756864546 336.6530352219603 315746.5119517774 0.008174602001873733 0.015451957222836349 1.6292890523700497e-07 6.788001860618963 0.045776776552238996 YDDYSS(ph)SRDGYGGSR ddPTM_A549_PD325901_60min_R1 3 YDDYSSSRDGYGGSR 15 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 YDDYS(0.134)S(0.538)S(0.326)RDGYGGS(0.001)R;YDDY(0.002)S(0.447)S(0.492)S(0.057)RDGYGGS(0.001)R;YDDYS(0.091)S(0.454)S(0.454)RDGYGGSR 77.969 0.0001482 97780000.0 20626.4 20749.5 22246.2 22033.2 25235.7 24637.9 24266.699999999997 24006.8 25306.0 25117.6 26607.300000000003 True False 22720.37694364688 22498.13318537658 23755.960909267953 23394.140722972188 23463.231490438782 24437.257111069714 25190.18254774777 23527.965541029724 24242.47682398552 23531.670449403573 23334.770777571408 0.9736704577138995 0.9641463119492489 1.0180498936848945 1.0025442694923683 1.0055051199813305 1.047246503683592 1.0795127489300096 1.0082792655346762 1.0388992913222257 1.0084380375410167 1.0 14.510193675020126 -5.8456318120031066 1.2265462145378327 1.0237157593437947 0.9612896561184411 0.43125378467165554 0.023414252402943023 0.5425942213200431 1.226029627958664 0.0038143058923702762 0.03275216546834886 1.426816713649571e-06 5.8456318120031066 -0.06242610322535358 YDDYSSS(ph)RDGYGGSR ddPTM_A549_MK2206_60min_R1 1 YDDYSSSRDGYGGSR 15 1 P38159;P38159-2;H3BUY5;Q96E39 P38159 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 YDDYS(0.013)S(0.049)S(0.936)RDGYGGS(0.002)R 75.533 0.00018598 30470000.0 2481.6 3396.4 2474.2 2986.2 4408.7 2557.3 2833.9 2319.9 4246.2 4148.6 4274.4 True False 2900.4334107050986 3569.2622528026727 2825.078764266574 3717.81913405561 3760.1860701695755 2827.9117886016447 3348.7829474042355 2648.7529293957837 3284.44247978805 3211.4283786721685 3212.9485125614096 0.9027326144086979 1.1108992997703546 0.8792791895735609 1.15713623157058 1.1703225418859575 0.8801609417473024 1.0422771900364307 0.824399432185161 1.0222518247482417 0.9995268726270284 1.0 11.649682146496158 -7.271697975420561 24.99055418792748 0.989744216504713 1.0449124681628867 0.10045560826968714 0.10604045334339747 1643.7757975275463 4004327.724148738 0.01511697845630251 0.02434609463891505 5.349362446851796e-08 7.271697975420561 0.05516825165817374 YDEELEGERPHS(ph)FR ddPTM_A549_MK2206_60min_R1 1 YDEELEGERPHSFR 14 1 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 YDEELEGERPHS(1)FR 50.608000000000004 0.010727 774140.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 91.037 147.82 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 70.4716784720576 111.11221437554457 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.6342388086504394 1.0 6.795873608215798 -10.632928445752034 0.679319263200112 1.082152444714398 6.834839394132852e-26 0.8961393264654683 0.10463042249371828 0.06440817340675754 0.046900237562256634 0.039956722371451286 0.008142451977166855 2.328474864986929e-11 10.632928445752034 -1.082152444714398 YDEGS(ph)GGS(ph)GDEGRDEAHKR ddPTM_A549_MK2206_60min_R1 1 YDEGSGGSGDEGRDEAHKR 19 2 O94762-4;O94762 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 2 Y(0.053)DEGS(0.973)GGS(0.973)GDEGRDEAHKR 43.611000000000004 0.018358000000000003 21296000.0 741.42 503.03 599.41 604.6 794.84 711.07 453.72 481.53 669.8 722.22 955.68 True False 866.553570021347 528.6320783851513 684.4153512606204 752.7270271415258 677.920088918181 786.3149554299349 536.1550509531918 549.7883521237775 518.0913694508113 559.0700003964259 718.3582805738092 1.206297182694355 0.7358891693472112 0.9527493031943949 1.0478434612603944 0.9437074886596601 1.0945999742661048 0.7463616212858611 0.7653400357334481 0.721215838198414 0.7782606750907817 1.0 9.48855975622768 -7.764200818888843 24.999997225208848 0.8473256887680695 0.9828840479170574 0.32502961659021234 0.13175788644275702 103.24007091470394 934661.038742177 0.022967371486785657 0.03251084087332173 1.721072562568068e-08 7.764200818888843 0.13555835914898795 YDEGS(ph)GGS(ph)GDEGRDEAHKR ddPTM_A549_PD325901_60min_R1 4 YDEGSGGSGDEGRDEAHKR 19 2 O94762-4;O94762 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 2 Y(0.049)DEGS(0.975)GGS(0.975)GDEGRDEAHKR;Y(0.009)DEGS(0.994)GGS(0.997)GDEGRDEAHKR;Y(0.049)DEGS(0.959)GGS(0.992)GDEGRDEAHKR;Y(0.002)DEGS(0.999)GGS(1)GDEGRDEAHKR 92.01 1.3695e-06 133019200.0 7943.9 8305.9 8883.7 8032.0 8656.900000000001 8371.7 8384.3 10066.0 9326.900000000001 9681.0 10062.2 True False 8750.358880009906 9005.867342558588 9486.601304027823 8528.11839800449 8048.869208683708 8303.52365082829 8703.369124565002 9865.225733375768 8934.922828168437 9069.740007830205 8824.613189541184 0.9915855451183647 1.020539614499163 1.0750161055525038 0.9664013838149761 0.9120931462721927 0.9409504385608106 0.9862606935429331 1.1179216042089986 1.0125002236650997 1.0277776275315436 1.0 13.10731732658573 -11.45228303064365 2.3560317686694434 0.9999381374612901 1.004679848733206 0.0 0.05514899567457456 6.767656524857031 68.1972603767742 0.04694552041339208 0.008302435604893382 3.5295307454898787e-12 11.45228303064365 0.004741711271915916 YDEGS(ph)GGSGDEGRDEAHKR ddPTM_A549_MK2206_60min_R1 1 YDEGSGGSGDEGRDEAHKR 19 2 O94762-4;O94762 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 1 YDEGS(0.542)GGS(0.458)GDEGRDEAHKR 60.765 0.00058446 21909000.0 330.17 673.13 530.15 333.39 732.42 335.36 513.69 351.74 600.84 586.35 591.36 True False 385.8946241185131 707.3894418293087 605.3332418058055 415.0705649664459 624.681988230907 370.8475726060484 607.0208236889384 401.60022215857254 464.75069934432037 453.8931277622392 444.5089912942906 0.8681368243978412 1.59139512514602 1.3618020189945719 0.933773158913776 1.4053303768097043 0.8342858746821747 1.3655985268632185 0.9034692886396307 1.045537229721926 1.0211112410586445 1.0 8.796068791202078 -7.262867923918229 0.7086275854404721 1.016792196999766 1.2700753734607375 0.1145262107408963 0.23374910809015859 0.9577020742205281 0.9283632983542287 0.040848215616103814 0.11297586275480377 5.459238602568066e-08 7.262867923918229 0.25328317646097154 YDEGS(ph)GGSGDEGRDEAHKR ddPTM_A549_PD325901_60min_R1 1 YDEGSGGSGDEGRDEAHKR 19 2 O94762-4;O94762 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 1 YDEGS(0.506)GGS(0.494)GDEGRDEAHKR 85.35 1.3054e-05 35009000.0 995.65 922.54 978.07 1196.1 1162.2 1147.1 1117.3 1439.8 1237.6 1180.4 1225.2 True False 1096.7276550412098 1000.2856834544115 1044.4477118127008 1269.980380459807 1080.5710813723394 1137.758397919793 1159.8194629100192 1411.0820594987504 1185.5879758699314 1105.8693425516758 1074.5081671827097 1.0206787519510048 0.9309242256176565 0.9720239861472385 1.1819178478555568 1.0056425017275823 1.0588643554966373 1.0793956698821472 1.313235303923762 1.103377351684972 1.0291865397833067 1.0 10.06946073318787 -6.066671497985654 24.7854498126341 1.0756731383629423 0.9697193859604946 0.25227260133131046 0.08825648361385799 200.08358606621044 74381.56625239099 0.013108427606440404 0.03468166904454201 8.576863571861468e-07 6.066671497985654 -0.10595375240244775 YDEGSGGS(ph)GDEGRDEAHKR ddPTM_A549_PD325901_60min_R1 1 YDEGSGGSGDEGRDEAHKR 19 2 O94762-4;O94762 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 1 YDEGS(0.032)GGS(0.968)GDEGRDEAHKR 117.31 1.1177e-14 33169000.0 972.88 1152.8 993.33 1162.4 1484.4 1288.3 1595.2 1528.9 1415.6 1166.7 1832.6 True False 1071.646061403598 1249.9505017519516 1060.7433471785353 1234.1988079980608 1380.1408649019966 1277.8085119345042 1655.9062089269346 1498.4048901011522 1356.1072548816048 1093.0343628897326 1607.2018178085484 0.6667775319373448 0.7777184469939711 0.6599938697337213 0.7679177526571712 0.8587228122874114 0.7950516840982805 1.030303842727602 0.9323066173134729 0.8437691146533695 0.6800853201996166 1.0 10.650335385591758 -6.969277301322206 1.1034446651248981 0.9304227642766177 0.7031250265933656 0.34724376733767226 0.0989745755839483 0.2451610863452905 0.5853925048785426 0.012073914220800255 0.031758375471202166 1.073303878362276e-07 6.969277301322206 -0.22729773768325212 YDEIFYNLAPADGKLS(ph)GSK ddPTM_A549_MK2206_60min_R1 2 YDEIFYNLAPADGKLSGSK 19 1 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 YDEIFYNLAPADGKLS(0.976)GS(0.024)K;YDEIFYNLAPADGKLS(0.973)GS(0.027)K 142.41 4.0447e-21 94832000.0 4440.9 4925.8 4509.2 3875.0 6290.0 5588.1 4971.0 5776.8 7418.7 7058.7 6024.9 True False 5190.415350419196 5176.502180207106 5148.672364332242 4824.375173955359 5364.749332312616 6179.429032919429 5874.166354333767 6595.679090708029 5738.376295229525 5464.134767519942 4528.751051219174 1.1461030407096229 1.143030853686151 1.1368857122199687 1.065277185562364 1.1845979767133337 1.3644885671637614 1.2970830782920597 1.4564013380537715 1.267099081033547 1.2065434168762612 1.0 12.144897520220807 -4.2739970976419865 13.016664496629389 1.1740757563492572 1.1542006384307593 0.0 0.13009878590475943 0.0 0.0 0.020741673269354746 0.0 5.3211181531895496e-05 4.2739970976419865 -0.019875117918497942 YDEIFYNLAPADGKLS(ph)GSK ddPTM_A549_PD325901_60min_R1 2 YDEIFYNLAPADGKLSGSK 19 1 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 YDEIFYNLAPADGKLS(0.978)GS(0.022)K;YDEIFYNLAPADGKLS(0.977)GS(0.023)K 176.84 4.906000000000001e-35 183940000.0 8328.8 7848.3 9324.0 8960.5 12155.0 10061.3 10430.4 9945.7 10060.8 10318.7 9291.7 True False 9174.3336446615 8509.703784611249 9956.782709766814 9513.96973422799 11301.27473247358 9979.36410861338 10827.334579733886 9747.32521124929 9637.97956337444 9667.175520999645 8148.87980493926 1.1258398533625056 1.044278966963445 1.2218590711979498 1.1675187218323324 1.386850095104307 1.224630175863511 1.328689935170125 1.1961552317094146 1.1827367434641256 1.1863195620016513 1.0 12.992386035915818 -10.233006265499776 0.7600643619859397 1.0051412552320678 1.2130247681302992 0.07426611087630142 0.10141139067606136 0.4746886291201345 0.5236464312289131 0.05272060010589685 0.01866736031146466 5.847816475286261e-11 10.233006265499776 0.20788351289823148 YDENEDLS(ph)DVEEIVSVR ddPTM_A549_PD325901_60min_R1 2 YDENEDLSDVEEIVSVR 17 0 Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;S4R3G4;F8WBN2;F6SRV7;F5H0A1 Q8NHM5-4 KDM2B Lysine-specific demethylase 2B 1 YDENEDLS(1)DVEEIVSVR;YDENEDLS(1)DVEEIVSVR 188.6 1.7663e-39 6624300.0 1792.2199999999998 1479.0900000000001 1460.15 1224.06 1510.23 1568.22 1441.38 1548.52 1630.93 1476.3 1314.07 True False 1974.1648550373693 1603.7381051668065 1559.2445595952395 1299.66740615804 1404.1566548106605 1555.4489362616841 1496.2325046534 1517.63355380956 1562.3876838118501 1383.0861660530652 1152.4477205760554 1.7130190114399075 1.3915929343546898 1.3529850697399488 1.1277452182459056 1.2184124535460814 1.3496915378375576 1.2983083552853074 1.3168784377055864 1.3557124162047756 1.2001292044395075 1.0 10.170485590651726 -13.882094448534774 0.21778599963922693 2.1408115887852724e-17 1.3948259879987175 0.2929600336994431 0.1442861184193496 19.222601329882597 0.36068443232770847 8.481987336913267 0.10206145643045002 1.3119145583403229e-14 13.882094448534774 1.3948259879987175 YDERPGPS(ph)PLPHR ddPTM_A549_MK2206_60min_R1 9 YDERPGPSPLPHR 13 1 P08621-4;P08621 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR 127.88 1.4966e-08 1818724800.0 19509.949999999997 22187.649999999998 20440.65 18315.38 27889.03 22015.370000000003 19491.87 20816.24 31849.89 30688.4 33882.280000000006 True False 22802.752587518502 23316.90661388449 23339.441533750516 22802.64892220866 23786.59063137463 24345.02184078012 23033.290472147997 23767.005767061368 24635.9407688231 23755.869125980556 25468.37477264394 0.8953359918360935 0.9155239320150738 0.9164087517205789 0.8953319214817513 0.9339657847710116 0.9558922411857063 0.9043879194399357 0.9331967971741155 0.9673149931531959 0.9327595238427692 1.0 14.636419278609639 -8.882897854474377 0.3907949475577397 1.0042074819241034 0.9040055788839653 0.30940985787626407 0.02556867824752098 0.31091316028105015 0.12685607992875736 0.010445143229352956 0.008716111832932631 1.3094898771841549e-09 8.882897854474377 -0.1002019030401381 YDERPGPS(ph)PLPHR ddPTM_A549_PD325901_60min_R1 13 YDERPGPSPLPHR 13 1 P08621-4;P08621 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR 131.48 1.0711999999999999e-08 2663533900.0 57944.32 58124.66 60056.51999999998 61905.35999999999 73196.79000000001 65684.58 63845.47 65393.229999999996 68709.78 65364.82000000001 71798.02 True False 63826.784710046144 63023.029086711984 64132.31659639259 65729.1134899267 68055.69998561707 65149.66655813312 66275.14429843167 64088.9107276535 65822.14689129636 61237.674109970016 62967.31870514811 1.0136493981730839 1.0008847507359293 1.0185016277523222 1.0438607652600078 1.080809877014073 1.0346584211915408 1.0525324193773098 1.0178122881134162 1.0453382523641561 0.9725310743613309 1.0 15.942315614899002 -6.003519585900749 7.381450976460972 1.030236257689218 1.0077595134493573 0.10613430808600954 0.026915175698868407 0.20706433553778603 80.62490823654453 0.0035339839035917467 0.010356328053569588 9.919286040327073e-07 6.003519585900749 -0.02247674423986057 YDERPGPS(ph)PLPHRDR ddPTM_A549_MK2206_60min_R1 3 YDERPGPSPLPHRDR 15 2 P08621-4;P08621 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 YDERPGPS(1)PLPHRDR;YDERPGPS(1)PLPHRDR;Y(0.003)DERPGPS(0.997)PLPHRDR 131.67 4.8404e-10 85633900.0 5726.08 6661.88 5080.81 5384.030000000001 8220.119999999999 5271.32 4850.37 4814.56 8696.28 9562.41 10864.58 True False 6692.502314784915 7000.941236809883 5801.345257567395 6703.117591698293 7010.95123712712 5829.127583580978 5731.619444793781 5497.03862397162 6726.586465105557 7402.2549396178265 8166.604938846257 0.819496273531067 0.8572645902715781 0.7103741764184057 0.8207961131820442 0.8584903138607801 0.7137761196030737 0.7018362572591298 0.6731118580040212 0.8236698745042833 0.9064054151079807 1.0 12.995520723392023 -10.030129694154807 0.8742056833676449 0.9838698050885273 0.7734748203347687 0.4947837656323899 0.06775012549196457 0.26843956792902857 0.4137101600812907 0.028925876903136315 0.01370588290677928 9.329756429697342e-11 10.030129694154807 -0.21039498475375862 YDERPGPS(ph)PLPHRDR ddPTM_A549_PD325901_60min_R1 2 YDERPGPSPLPHRDR 15 2 P08621-4;P08621 P08621-4 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 YDERPGPS(1)PLPHRDR;YDERPGPS(1)PLPHRDR 111.01 5.0585e-07 86595000.0 7883.1 6980.4 7900.2 7931.200000000001 7981.4 9449.8 7926.9 9348.5 8837.1 9147.5 10278.2 True False 8683.386508768506 7568.662805715933 8436.355079761881 8421.092210937897 7420.813998335221 9372.843961871202 8228.562517266124 9162.036833743627 8465.707418843056 8569.925288877881 9014.046558878 0.9633172462611894 0.8396520648389043 0.9359120817334644 0.934218850095011 0.8232500187195513 1.039804254465473 0.9128599972852095 1.016417740234531 0.9391683705588495 0.950730089189222 1.0 13.13795918646696 -7.266493396272194 24.99045465366967 0.9737823816350616 0.8999352107976972 0.3642599070505208 0.05072812392430709 357.35375329047747 1766995.4265834705 0.007059920847844973 0.011496163152132465 5.413854799356261e-08 7.266493396272194 -0.07384717083736436 YDGES(ph)DKEQFDDDQK ddPTM_A549_MK2206_60min_R1 2 YDGESDKEQFDDDQK 15 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 YDGES(1)DKEQFDDDQK;YDGES(1)DKEQFDDDQK 145.52 3.5865e-14 159812000.0 10107.2 10746.7 9878.7 8849.900000000001 15236.8 12680.6 12359.099999999999 13355.6 15141.800000000001 13440.0 14034.4 True False 11813.048262684784 11293.661127132995 11279.648204898625 11018.12589728711 12995.486904066902 14022.452675298959 14604.588491218363 15248.797199809618 11712.20647648596 10403.89466551462 10549.2711502648 1.1197975760048846 1.0705631665226 1.06923483568014 1.0444442786941295 1.23188481165741 1.3292342642028854 1.384416826829953 1.4454834824704315 1.110238452463322 0.9862192863678045 1.0 13.3648557060438 -9.144499980715546 3.194498238322712 1.0417593205757583 1.20942941451872 0.2778356244608805 0.1294034879676547 0.26324963852914796 5.591644291410668 0.027926482169725864 0.026943332780062605 7.169684074167537e-10 9.144499980715546 0.16767009394296184 YDGES(ph)DKEQFDDDQK ddPTM_A549_PD325901_60min_R1 2 YDGESDKEQFDDDQK 15 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 YDGES(1)DKEQFDDDQK;YDGES(1)DKEQFDDDQK 157.7 4.5479e-20 216390000.0 67468.0 69361.0 67128.0 69561.0 78195.0 62477.0 62477.0 64103.0 74863.0 70259.0 77700.0 True False 74317.30169268334 75206.2948924507 71683.70975345629 73857.62498550682 72702.85295810546 61968.2080261833 64854.59642372619 62824.41537716936 71716.76845309521 65822.834749524 68143.39258088196 1.0906017278854048 1.1036476471755574 1.0519539318265112 1.0838560011206138 1.0669097942520502 0.9093795550703012 0.9517371232544347 0.9219443440917723 1.052439066164366 0.9659459597846761 1.0 16.05628615465871 -7.02661028001918 24.671410183311973 1.0028611387969484 1.0810341000444659 0.5374396819299112 0.045910404734383764 545.4658564413955 505721.9909616276 0.007773069849583988 0.013493086535530156 9.405669623613582e-08 7.02661028001918 0.07817296124751749 YDGHLPIEIK ddPTM_A549_MK2206_60min_R1 2 YDGHLPIEIK 10 0 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 ; 61.353 0.0081274 4543700.0 1024.98 1244.42 1122.04 1334.34 1469.23 1381.25 1308.67 1196.3700000000001 1646.8000000000002 1558.2800000000002 1538.78 False True 1197.971565644952 1307.7556626524267 1281.1621439890325 1661.2533599007977 1253.108213277212 1527.4129582004557 1546.4383993011418 1365.9591112294643 1273.802429399218 1206.2634657275382 1156.6584578325028 1.0357176377630672 1.130632516277164 1.107640838411229 1.4362522909432318 1.0833865475081117 1.3205393068777804 1.3369879317694693 1.1809528577599098 1.1012779276142024 1.0428864783369083 1.0 10.175747207937812 -9.099515237899597 1.4621119254239618 1.0319930033712177 1.210258999117453 0.27352421665582594 0.11536233122934171 0.3208666202724168 1.4070623738684915 0.02469615113156613 0.023173221390001192 7.952153636719718e-10 9.099515237899597 0.17826599574623536 YDGIILPGK ddPTM_A549_MK2206_60min_R1 2 YDGIILPGK 9 0 Q5VVC8;P62913-2;P62913 Q5VVC8 RPL11 60S ribosomal protein L11 0 ; 125.96 0.00018653 38133000.0 4911.3 5176.200000000001 5606.299999999999 5064.5 7492.7 6052.1 5524.0 5568.4 8175.3 7852.1 7918.1 False True 5740.20737024337 5439.646470662229 6401.3576413013025 6305.302727354044 6390.53375551967 6692.529204941161 6527.63929618582 6357.737752509795 6323.607603271451 6078.3051564797115 5951.817241557296 0.964446174550454 0.9139471609916138 1.07552994010051 1.0593911861622045 1.0737113550629762 1.1244513958210949 1.0967472674745402 1.0682011047177735 1.0624666965776783 1.0212519823423407 1.0 12.539114511923385 -5.761564924306223 24.999999801623453 1.050683328846421 0.9391966458847859 0.6324964906325529 0.035602472507133776 1.9651398214682534 391763.7039192291 0.006143062833802263 0.021079223371135495 1.7315501554922915e-06 5.761564924306223 -0.11148668296163511 YDGIILPGK ddPTM_A549_PD325901_60min_R1 2 YDGIILPGK 9 0 Q5VVC8;P62913-2;P62913 Q5VVC8 RPL11 60S ribosomal protein L11 0 ; 123.92 0.00026056 77353000.0 10024.0 9251.400000000001 8896.6 10194.900000000001 12335.5 11490.599999999999 9941.6 10271.7 11794.2 11382.0 11744.7 False True 11041.629100721218 10031.047945791126 9500.376775601822 10824.615818702188 11469.097035164768 11397.024363296281 10319.93302825226 10066.822885507232 11298.53078943531 10663.338577535731 10300.176355787431 1.0719844708791983 0.9738714755262333 0.9223508848238099 1.0509155809376105 1.1134855015099376 1.1064882745325575 1.0019180906988772 0.9773447111758351 1.0969259553587087 1.0352578644485293 1.0 13.33038141845715 YDILPLS(ph)PVSR ddPTM_A549_MK2206_60min_R1 3 YDILPLSPVSR 11 0 I3L4W0;I3L0X6;I3L1D9;I3L3K5;I3L4B2;O95476 I3L4W0 CTDNEP1 CTD nuclear envelope phosphatase 1 1 YDILPLS(0.962)PVS(0.037)R;YDILPLS(0.968)PVS(0.032)R;YDILPLS(0.894)PVS(0.106)R 52.343999999999994 0.022890999999999998 1905860.0 600.69 1059.48 1046.93 891.02 1480.5500000000002 1386.56 999.7 1119.71 1781.6999999999998 1634.28 1598.64 True False 702.0717865395095 1113.4030065950346 1195.4004165684278 1109.3199399994076 1262.763056272725 1533.2848588759623 1181.3325496736 1278.4323214680603 1378.1477947902522 1265.0950129432463 1201.6535677805477 0.5842547347787058 0.9265590653148796 0.9947962113376241 0.9231611919967248 1.0508544976111929 1.2759791174322705 0.9830891209814483 1.0638942501783795 1.1468761311429292 1.0527951207101018 1.0 10.230805317081611 -4.865556899219782 0.9411923772400388 1.0724442324096628 1.0200764119965671e-13 0.7213292013444199 0.08595646555627445 1.602470910996028 0.6481568995481048 0.01374156023550231 2.08973205574843 1.3628344423539115e-05 4.865556899219782 -1.0724442324095609 down YDILPLS(ph)PVSR ddPTM_A549_PD325901_60min_R1 2 YDILPLSPVSR 11 0 I3L4W0;I3L0X6;I3L1D9;I3L3K5;I3L4B2;O95476 I3L4W0 CTDNEP1 CTD nuclear envelope phosphatase 1 1 YDILPLS(0.971)PVS(0.029)R;YDILPLS(0.993)PVS(0.007)R 77.593 0.0011277000000000001 4084000.0 1444.94 1083.72 1137.6599999999999 1272.95 1516.8899999999999 1282.6599999999999 1355.47 1558.62 1625.6999999999998 1194.6799999999998 1564.17 True False 1591.6292450913922 1175.0488877156713 1214.8684489053305 1351.577230420793 1410.3488793864115 1272.2144422245676 1407.0531525916447 1527.5321013862633 1557.3774825240353 1119.2477009146357 1371.7870060905805 1.160259747340321 0.8565826053888731 0.8856101155000382 0.9852675556919126 1.0281106856418822 0.9274139764964081 1.025708179436375 1.1135344587783615 1.1352910295909306 0.815904871489015 1.0 10.421840779940066 -7.978877110782978 6.304324844441485 1.0694723528202528 0.9678788703633617 0.0 0.11165868440487521 0.1882960953926391 26.93147424453463 0.013586395778488622 0.018619119027046657 1.049839452221121e-08 7.978877110782978 -0.10159348245689104 YDIPATAATATS(ph)PTPNPVPSVPANPPK ddPTM_A549_MK2206_60min_R1 2 YDIPATAATATSPTPNPVPSVPANPPK 27 0 P51610;A6NEM2;P51610-4;P51610-3 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 YDIPATAAT(0.003)AT(0.019)S(0.489)PT(0.489)PNPVPSVPANPPK;YDIPATAAT(0.002)AT(0.02)S(0.489)PT(0.489)PNPVPS(0.001)VPANPPK 112.47 8.736399999999999e-14 15250200.0 1723.25 2033.3899999999999 2253.87 2017.0100000000002 2728.5 1603.97 2110.93 2086.95 3238.5 2777.29 2986.0 True False 2014.0924705825125 2136.88086568909 2573.5026571891935 2511.1775405470194 2327.1412644220954 1773.7010407708851 2494.458656679498 2382.781553516326 2504.9849208218156 2149.8982600883246 2244.4937905924508 0.8973482034231326 0.9520547014411853 1.1465848860779866 1.1188168802570737 1.0368223223321233 0.7902454656836915 1.1113680363629195 1.061612005122711 1.1160578529204157 0.9578544031172583 1.0 11.132174389695287 YDIPATAATATS(ph)PTPNPVPSVPANPPK ddPTM_A549_PD325901_60min_R1 2 YDIPATAATATSPTPNPVPSVPANPPK 27 0 P51610;A6NEM2;P51610-4;P51610-3 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 YDIPATAAT(0.007)AT(0.295)S(0.341)PT(0.341)PNPVPS(0.017)VPANPPK;YDIPATAATAT(0.016)S(0.492)PT(0.492)PNPVPSVPANPPK 128.38 1.5331e-24 23112000.0 2708.9 2567.4 2310.42 3069.7 3878.0 3681.1 2863.8 2666.3999999999996 3240.7 3039.3 3873.8 True False 2983.9055338132207 2783.7638082910844 2467.2189948841087 3259.308397205476 3605.622658373717 3651.122342064813 2972.7834761314903 2613.2165602496666 3104.5046488378184 2847.398079309818 3397.347158041447 0.8783045697141609 0.8193933910174519 0.7262192764269777 0.959368661954597 1.0613053334391471 1.0746980429782353 0.8750308219444034 0.7691932671832609 0.9138025949127757 0.8381239675698401 1.0 11.730192932256472 -4.549463491916797 0.01853755926618628 1.7040830830235791 3.14031167916561e-05 0.0 0.11070935114940228 2797.1683393391295 6.309914748323732 243.39128344936591 344.1226453059824 2.8218667876185153e-05 4.549463491916797 -1.7040516799067875 YDLANQDHMMDAPPLS(ph)PFPHIK ddPTM_A549_MK2206_60min_R1 9 YDLANQDHMMDAPPLSPFPHIK 22 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;Y(0.002)DLANQDHMMDAPPLS(0.998)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK 138.02 1.6062e-22 57494700.0 5226.29 5950.09 5884.549999999999 5247.249999999999 8782.78 6484.9 6120.82 5970.15 9500.919999999998 8623.07 8762.380000000001 True False 6108.359981477251 6252.92416611078 6719.067675315194 6532.826485557999 7490.844696478318 7171.127813671772 7232.893764822613 6816.437045317567 7348.976789851601 6675.112498017789 6586.439216614698 0.9274146136608286 0.9493633753329711 1.0201365949549692 0.9918601342404471 1.137313265957454 1.0887715771493285 1.0981493227140384 1.034919904540026 1.1157738723699682 1.0134630076262463 1.0 12.685283005903543 -5.93441722177789 1.3855778861964305 1.0637235741772462 0.9238451274980607 0.5417847297116212 0.0440327231341131 0.355879766497277 1.1468534209272396 0.0075655302387524544 0.04885635735674129 1.1630082037784105e-06 5.93441722177789 -0.13987844667918548 YDLANQDHMMDAPPLS(ph)PFPHIK ddPTM_A549_PD325901_60min_R1 8 YDLANQDHMMDAPPLSPFPHIK 22 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK 154.69 1.976e-32 53596000.0 8529.73 8817.43 9277.13 9840.02 10043.73 9575.939999999999 9673.689999999999 10453.869999999999 10620.259999999998 10522.220000000001 10304.900000000001 True False 9395.661910344652 9560.505770873277 9906.731829714598 10447.815687093142 9338.293053787487 9497.95671953279 10041.827566596283 10245.359361947632 10173.927405148988 9857.845233466702 9037.462628143248 1.0396349392456625 1.0578749992394145 1.0961850950137695 1.1560563088314149 1.0332870450503922 1.0509539137628667 1.1111335094571098 1.1336544098166352 1.1257504261723545 1.0907757673894805 1.0 13.14170206088309 -10.904320195375488 1.178339866125263 1.000418619046947 1.0926114108394382 0.0 0.046589582335828376 0.3803340490461249 0.944813363382433 0.02808059062528902 0.006816555635880757 1.2464641858864288e-11 10.904320195375488 0.09219279179249118 YDLDFKS(ph)PDDPSR ddPTM_A549_MK2206_60min_R1 1 YDLDFKSPDDPSR 13 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 Y(0.002)DLDFKS(0.897)PDDPS(0.101)R 42.31399999999999 0.023746 2459300.0 1096.5 1177.8 1426.1 1439.5 1400.5 1381.6 1324.0 1366.0 2112.1 2229.9 1804.6 True False 1281.5623931488312 1237.7449892094544 1628.342424104987 1792.1775646216117 1194.488305231131 1527.7999949681446 1564.5536618664064 1559.6346831995506 1633.7127223306334 1726.1640412671893 1356.4680155737221 0.9447789247037945 0.9124763540303208 1.200428174796495 1.3212088630513008 0.8805871509811595 1.1263074229744792 1.1534025453631311 1.1497762315758684 1.2043872052815412 1.2725431204045774 1.0 10.405639315092637 YDLDFKS(ph)PDDPSR ddPTM_A549_PD325901_60min_R1 2 YDLDFKSPDDPSR 13 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 YDLDFKS(0.999)PDDPS(0.001)R;YDLDFKS(0.997)PDDPS(0.003)R 88.992 5.2783e-05 14715000.0 5689.5 6556.5 6865.6 6001.299999999999 8109.6 6068.7 6150.4 6287.8 7052.3 6214.4 6657.799999999999 True False 6267.093851611474 7109.039265038749 7331.540902206673 6371.986671058805 7540.009672601214 6019.278519271071 6384.456837628019 6162.384896316324 6755.916356033867 5822.0217234438605 5838.932807271502 1.0733286472841002 1.217523732450821 1.255630291390981 1.0912930292884113 1.2913335230046286 1.030886759267888 1.0934287220563919 1.0553957546218056 1.1570464293783962 0.997103737209207 1.0 12.511488993776048 -7.283379859147277 24.805117885153493 1.0732248725618057 1.1862097216330918 0.427935998673009 0.07342471495291894 638.9980794883563 722426.7287437768 0.011537423397743595 0.018452438722952335 5.2073904328207045e-08 7.283379859147277 0.11298484907128614 YDLHQVK ddPTM_A549_PD325901_60min_R1 1 YDLHQVK 7 0 Q9BQG0;Q9BQG0-2;I3L1L3 Q9BQG0 MYBBP1A Myb-binding protein 1A 0 59.205 0.03319 810710.0 561.74 542.04 595.65 660.97 737.5 564.21 509.96 545.33 657.17 1039.8 817.79 False True 618.7674312688689 587.7196130895451 636.0743909344269 701.7966157282154 685.7005442368788 559.6152608232296 529.3668068608197 534.4529653468908 629.5514302702345 974.1468505466213 717.2070143979332 0.8627459280892554 0.8194560305338234 0.8868769799586889 0.9785133185253992 0.9560706050992783 0.7802702003591032 0.7380948543917993 0.7451864728282709 0.8777820317314073 1.3582505901233815 1.0 9.486245787835484 -10.08722912463468 1.0028879426230335 0.9864487069981314 0.850477476508443 0.3376590830652886 0.1347127011631795 0.4356294527739248 0.8789702034864076 0.03172033384887946 0.015768850255290217 8.180330972118539e-11 10.08722912463468 -0.1359712304896884 YDS(ph)DGDKSDDLVVDVSNEDPATPR ddPTM_A549_MK2206_60min_R1 1 YDSDGDKSDDLVVDVSNEDPATPR 24 1 H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 YDS(1)DGDKSDDLVVDVSNEDPATPR 118.43 2.0886999999999998e-16 1987400.0 957.88 829.18 660.84 626.67 1139.6 951.72 902.62 774.66 1484.7 1459.5 1414.0 True False 1119.5467260824473 871.3817202858678 754.5570489766073 780.2041781322856 971.966349618992 1052.4303786993933 1066.614370297474 884.4704272967525 1148.4178205787102 1129.797936333228 1062.864775585307 1.0533294091583065 0.8198425051822875 0.7099276091458406 0.7340577993118989 0.914477901559718 0.9901827616027942 1.0035278191528194 0.8321570604404358 1.0804928782650551 1.0629742957763013 1.0 10.053742344370145 -7.10734159504235 2.9493056064096184 1.0163771430397348 0.8203182050598233 0.34682592212125174 0.10285626170110596 0.19850041561312995 3.328760120186806 0.015731446473298424 0.02909914589582668 7.810132556660212e-08 7.10734159504235 -0.19605893797991147 YDS(ph)DGEKS(ph)DDNLVVDVSNENEK ddPTM_A549_PD325901_60min_R1 2 YDSDGEKSDDNLVVDVSNENEK 22 1 H7C4P7 H7C4P7 TLE4 2 Y(0.011)DS(0.99)DGEKS(0.999)DDNLVVDVSNENEK;Y(0.021)DS(0.98)DGEKS(1)DDNLVVDVSNENEK 75.717 5.3316e-05 17236000.0 4515.5 4839.0 4164.799999999999 4324.8 5293.4 4013.5 4099.0 5330.5 4517.0 5063.1 5901.3 True False 4973.9102358645905 5246.799512471976 4447.448372976918 4591.933073666561 4921.609845238633 3980.815386671684 4254.989688058867 5224.178995803645 4327.166198290625 4743.4150019259505 5175.477511422889 0.9610533955343414 1.013780757599984 0.8593310207919705 0.8872481937235015 0.9509479723129045 0.7691687149418687 0.822144368064126 1.0094100465654168 0.8360902329765822 0.9165173631721275 1.0 12.337476262555253 -5.752333709704934 24.912255486801392 0.9063882399234288 0.9874170896662101 0.18584274304337234 0.07154381040763101 294.8195750755249 806579.6790521424 0.011205356753506937 0.042160862591401886 1.7687493378882723e-06 5.752333709704934 0.08102884974278135 YDS(ph)DRYR ddPTM_A549_MK2206_60min_R1 4 YDSDRYR 7 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 YDS(1)DRYR;YDS(1)DRYR;YDS(1)DRYR;YDS(1)DRYR 117.89 0.0037052 46824300.0 8786.6 9636.0 8931.2 7875.38 11913.6 9223.9 9439.0 9397.4 12673.4 14430.099999999999 15332.199999999999 True False 10269.563268254928 10126.431241316262 10197.77845744791 9804.848453539244 10161.125221850494 10199.966975670714 11153.944119605 10729.510228330499 9802.895135261146 11170.330387860302 11524.791592806963 0.8910845099068456 0.8786650205142567 0.8848557802826309 0.8507614540864064 0.8816753986416915 0.885045676837825 0.9678217631776159 0.9309938615312724 0.8505919657045673 0.9692435909064167 1.0 13.492453041636391 -7.615510538930213 8.222868278006588 0.930379176148921 0.8771039616676175 0.414575215624985 0.03705203542443907 0.33767135874630055 26.590233376096297 0.008311385231037955 0.012336639646094088 2.4237591470022507e-08 7.615510538930213 -0.05327521448130346 YDS(ph)DRYR ddPTM_A549_PD325901_60min_R1 1 YDSDRYR 7 1 E7EX17;P23588;P23588-2;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 YDS(0.996)DRY(0.004)R 51.193000000000005 0.041826 10664000.0 4041.2 4661.1 4653.1 4807.1 4950.1 4676.0 5075.7 5156.1 4940.6 4916.1 5913.1 True False 4451.459649025795 5053.907255131876 4968.887347363355 5104.023649283789 4602.422052917933 4637.920206322857 5268.858541029611 5053.257540617801 4732.963763399304 4605.696607013124 5185.826186229254 0.8583896739243714 0.9745616365917387 0.958166966829322 0.9842257464851623 0.8875002531206067 0.8943454793449617 1.0160114033557173 0.9744363499950146 0.9126730425264721 0.8881316962075128 1.0 12.340358136733082 -7.7417366766385625 24.99961148891895 0.9630430677108315 0.9307283735553191 0.08848397563981081 0.049000558043817484 482.6282428469778 612377.3156858843 0.007521379042187332 0.011147885392588916 1.812438685417194e-08 7.7417366766385625 -0.03231469415551236 YDS(ph)SNQVK ddPTM_A549_MK2206_60min_R1 1 YDSSNQVK 8 0 O95983;A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2 O95983 MBD3 Methyl-CpG-binding domain protein 3 1 YDS(0.972)S(0.027)NQVK 52.693000000000005 0.04421 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YDS(ph)SNQVK ddPTM_A549_PD325901_60min_R1 2 YDSSNQVK 8 0 O95983;A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2 O95983 MBD3 Methyl-CpG-binding domain protein 3 1 YDS(0.5)S(0.5)NQVK;YDS(0.5)S(0.5)NQVK 119.27 0.0012255999999999999 43970000.0 19500.2 19998.9 19133.1 19651.300000000003 23918.0 21731.0 20953.0 22756.0 21211.0 24470.0 25018.0 True False 21479.8459487115 21684.27748914566 20431.587222676888 20865.116169659563 22238.082192620568 21554.029940890086 21750.377880921544 22302.11372826334 20319.575433239414 22924.96002392368 21940.944602168638 0.9789845577837354 0.9883019114410595 0.9312081860257482 0.9509670867861022 1.0135426070226057 0.9823656333720332 0.9913145616698628 1.0164609652247607 0.9261030371149577 1.044848361800147 1.0 14.42133801757537 YDTNNNEEEEGEQFDFDS(ph)GDEIPEADR ddPTM_A549_MK2206_60min_R1 1 YDTNNNEEEEGEQFDFDSGDEIPEADR 27 0 O15013-7;O15013-4;O15013-5;O15013-6;O15013 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 YDTNNNEEEEGEQFDFDS(0.999)GDEIPEADR 64.984 0.00014164 1657900.0 160.61 0.0 347.88 204.71 176.71 146.95 305.06 263.55 0.0 225.65 267.28 True False 187.71704146250238 0.0 397.214615032356 254.86395918978107 150.71619308632154 162.50015146248455 360.4854532394002 300.9090195880247 0.0 174.67550827926885 200.90699944727078 0.9343479419778494 0.0 1.9771069008305373 1.2685668487954878 0.7501789061653767 0.8088327032385633 1.7942901652563465 1.4977527931623908 0.0 0.8694346576268164 1.0 7.650384017120992 -8.752298802738725 24.999452847446626 0.5277777616479515 1.123073442734408 0.13180172771577126 0.563627915603993 262.06892356630465 716757.164895569 0.1043328605465521 0.11749035349411172 1.7688915090585078e-09 8.752298802738725 0.5952956810864565 YDTNNNEEEEGEQFDFDS(ph)GDEIPEADR ddPTM_A549_PD325901_60min_R1 2 YDTNNNEEEEGEQFDFDSGDEIPEADR 27 0 O15013-7;O15013-4;O15013-5;O15013-6;O15013 O15013-7 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 YDTNNNEEEEGEQFDFDS(1)GDEIPEADR;YDTNNNEEEEGEQFDFDS(1)GDEIPEADR 114.76 8.4189e-18 32451000.0 590.87 639.36 577.97 627.21 520.3299999999999 619.6500000000001 571.3299999999999 701.69 669.3199999999999 548.58 564.55 True False 650.8546874244963 693.2411110341153 617.1945198159503 665.9513372027383 483.78381584105125 614.6037758443026 593.0722757937721 687.694242484844 641.1908080229979 513.9425651787514 495.11392897730866 1.3145553969141623 1.4001648316904591 1.2465707056369983 1.3450466614387235 0.9771161494897538 1.2413380837695445 1.197850113041261 1.3889616151687008 1.2950369005925988 1.0380288961781676 1.0 8.95161672680216 -10.691828256698958 0.8869852855130849 0.9949467252204651 1.2656636186226553 0.42746854448480154 0.1101989444557808 0.4676734771525261 0.636064830247671 0.083384608998549 0.020416535357278075 2.033160872695667e-11 10.691828256698958 0.2707168934021902 YEAVS(ph)PERLELER ddPTM_A549_MK2206_60min_R1 2 YEAVSPERLELER 13 1 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 YEAVS(1)PERLELER;YEAVS(1)PERLELER 94.882 4.7738e-05 50273000.0 3311.6000000000004 3280.5 3143.1000000000004 3148.9 5428.6 3378.3 3732.4 3702.1000000000004 5735.6 4988.0 5138.7 True False 3870.5171191533705 3447.463437851597 3588.838842440493 3920.380641359492 4630.0601312229355 3735.7894636659544 4410.528767031855 4226.884012205755 4436.49575787112 3861.2073356835504 3862.6189690949163 1.0020447655131526 0.8925196778235163 0.9291205969719102 1.0149540176566032 1.198684148829685 0.9671648934456819 1.141849300259954 1.0943051970762192 1.148571938720291 0.9996345398231975 1.0 11.915363653531532 -6.520822105961346 24.71853752024833 1.0795789471644797 0.9423040979392208 0.42320308861846845 0.0704676704565749 50.38751132997432 605598.9504926404 0.010457376991043883 0.022049187595217092 3.0142404529521615e-07 6.520822105961346 -0.1372748492252589 YEAVS(ph)PERLELER ddPTM_A549_PD325901_60min_R1 2 YEAVSPERLELER 13 1 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 YEAVS(1)PERLELER;YEAVS(1)PERLELER 124.68 1.0851e-06 77591000.0 4321.1 4945.1 5423.4 4845.0 5701.8 5894.9 5209.1 6359.4 5810.799999999999 5803.1 6167.4 True False 4759.774890974311 5361.840931829958 5791.46453755355 5144.264646206644 5301.325238142153 5846.893888847868 5407.335151028894 6232.556778147212 5566.5922836013215 5436.6912756367565 5408.848898369772 0.8799977556054318 0.9913090627186901 1.070738829346684 0.9510830756904906 0.9801207868350645 1.080986730949375 0.9997201350288536 1.152288942666841 1.0291639474859602 1.005147560560506 1.0 12.40110587958047 -7.076873149475029 24.963845746423253 1.0287411457910625 0.9795393566629669 0.22910069652926002 0.05984292159779177 184.95657673179176 60061.95720341243 0.008785170498349516 0.015216364858284015 8.377739468663949e-08 7.076873149475029 -0.049201789128095585 YEDDGIS(ph)DDEIEGK ddPTM_A549_MK2206_60min_R1 2 YEDDGISDDEIEGK 14 0 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 YEDDGIS(1)DDEIEGK;YEDDGIS(1)DDEIEGK 148.91 2.5918e-13 4862200.0 1997.41 1032.07 1294.21 1552.48 2195.6 1690.06 1673.37 1991.08 2359.2 1658.8899999999999 1887.25 True False 2334.523976014053 1084.5979546726114 1477.7484388899204 1932.8376696934765 1872.630148493732 1868.9010274289674 1977.3996685478758 2273.3216874267664 1824.8449668682515 1284.145596850859 1418.5937395497663 1.6456607067467992 0.7645585373983403 1.041699535033144 1.3625026079044458 1.3200609140486324 1.3174321691438733 1.3939154060946748 1.6025177780273259 1.2863760187235997 0.9052243507421804 1.0 10.470245770568887 -10.43404573098195 1.015643569256114 1.0163982132572278 1.2894874009186132 0.23953929872355229 0.23285002501409258 0.669247460287118 1.3307442068075315 0.11289359427677866 0.04202251661603166 3.680902118948501e-11 10.43404573098195 0.27308918766138546 YEDDGIS(ph)DDEIEGK ddPTM_A549_PD325901_60min_R1 2 YEDDGISDDEIEGK 14 0 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 YEDDGIS(1)DDEIEGK;YEDDGIS(1)DDEIEGK 175.28 8.1821e-23 7661600.0 2425.44 2284.4 2278.33 2175.7200000000003 2549.06 2281.63 2123.69 1760.19 2310.5 2516.4 2606.71 True False 2671.6688832854434 2476.9144051024978 2432.951174511264 2310.1092829813656 2370.0228193796056 2263.0491617520165 2204.50818507776 1725.0816296076569 2213.397719980185 2357.514074548489 2286.1011952961467 1.1686573143755123 1.0834666506447597 1.0642359924911784 1.010501760698353 1.03670949661202 0.9899164421979387 0.9643090995331828 0.7545954803563216 0.9681976128329071 1.0312378469506427 1.0 11.15867355117188 -5.741449219199994 0.7238774320628242 0.9656843297790412 1.2045462922385366 0.47994443380658036 0.07015867653146998 1.2100685261726989 0.6461873364164721 0.011920628426737814 0.2045691824641593 1.8136387270138592e-06 5.741449219199994 0.23886196245949542 YEDDGIS(ph)DDEIEGKR ddPTM_A549_MK2206_60min_R1 2 YEDDGISDDEIEGKR 15 1 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 YEDDGIS(1)DDEIEGKR;YEDDGIS(1)DDEIEGKR 163.35 2.8643e-20 50006000.0 6106.0 6337.200000000001 5108.7 5145.0 9801.8 6740.9 6166.1 7037.4 9233.4 7692.5 7924.8 True False 7136.543522632706 6659.736411630286 5833.190478946179 6405.525230967826 8359.968204365947 7454.217563752721 7286.400554708798 8034.97300113362 7142.049642709949 5954.758907326721 5956.853446646705 1.198039130314694 1.1179956786378982 0.9792402198898916 1.0753202656972687 1.4034201578472656 1.2513682988036121 1.2231962092017783 1.3488619575921834 1.1989634639627447 0.9996483815929426 1.0 12.540334750307798 -10.482871296279837 0.9617849437200106 1.0076575219180264 1.1972869158085946 0.3149664925526855 0.11244566740938144 0.5571769569018805 0.9739658407121788 0.06575508707126455 0.022233697866949825 3.2894910091557074e-11 10.482871296279837 0.1896293938905682 YEDDGIS(ph)DDEIEGKR ddPTM_A549_PD325901_60min_R1 2 YEDDGISDDEIEGKR 15 1 I3VM54;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 YEDDGIS(1)DDEIEGKR;YEDDGIS(1)DDEIEGKR 220.64 4.991999999999999e-47 78350000.0 13666.7 13354.1 14172.7 14054.900000000001 15632.8 13373.7 12784.0 13580.599999999999 15346.800000000001 14482.2 13957.599999999999 True False 15054.133323107217 14479.496873218024 15134.544649368518 14923.03925200614 14534.806058232238 13264.789021236102 13270.502115673222 13309.724279225406 14701.8273659346 13567.791420452284 12240.903684516312 1.229822054898561 1.1828780984146898 1.2363911227005577 1.219112545659721 1.187396489085811 1.0836445872876947 1.0841113089108987 1.087315497471078 1.2010410133796856 1.108397857718166 1.0 13.579422448449678 -14.999999999999998 0.19470259278244498 0.24645388522899006 1.2052831223493994 0.37835357853604334 0.05848206845917892 27.821773252247123 0.3228580635856055 8.07244169509946 0.05441635816971853 1.000000000000004e-15 14.999999999999998 0.9588292371204094 YEDKPEPEVDALGS(ph)PPALLK ddPTM_A549_MK2206_60min_R1 2 YEDKPEPEVDALGSPPALLK 20 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK 194.21 3.5629e-46 43475000.0 8460.0 9377.3 8444.9 7347.0 10845.400000000001 8708.0 7302.3 7330.6 11382.0 10738.5 10351.3 True False 9887.841172858287 9854.5645163133 9642.513805009614 9147.015329819367 9250.056026814507 9629.474780097424 8629.033387497786 8369.734999020957 8803.995173319108 8312.665391787848 7780.786528653599 1.2708022686967735 1.2665254958509382 1.2392723755496955 1.175590063566772 1.1888330302791579 1.2375965777541675 1.1090181379119481 1.0756926652849927 1.1315045260395502 1.0683579816996067 1.0 12.9257002835283 -2.000000002087821 0.045066501187072214 0.5769936350916337 2.2241908364282263 0.8154608192414209 0.03698128982000808 113.81666045152174 0.3782921344104238 3.464765432816458 13.458086047527141 0.009999999951926145 2.000000002087821 1.6471972013365925 YEDKPEPEVDALGS(ph)PPALLK ddPTM_A549_PD325901_60min_R1 4 YEDKPEPEVDALGSPPALLK 20 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK 178.33 1.6780999999999998e-35 44248600.0 7630.04 8349.83 8075.49 9789.48 9522.1 9039.58 9740.92 10843.41 12029.0 13011.11 14583.7 True False 8404.636043861423 9053.49947783093 8623.541313266278 10394.153946077815 8853.300545461678 8965.964657543193 10111.616041035953 10627.129681059418 11523.462961974306 12189.586294110071 12789.997353691215 0.6571257062407312 0.7078578069617876 0.6742410553179286 0.8126783500137351 0.6922050334049992 0.7010138008320698 0.7905878133835363 0.8308938139062562 0.9009746165935378 0.9530562014222885 1.0 13.642728345268846 -8.622485345445138 0.5599134273632095 0.9878495720105964 0.6917589649713171 0.8713731481908776 0.04051699510115734 0.15591475501138974 0.10916917216627074 0.013133284228924264 0.01420735876621166 2.3851442768881994e-09 8.622485345445138 -0.29609060703927936 YEDSDKPFVDS(ph)PASR ddPTM_A549_MK2206_60min_R1 1 YEDSDKPFVDSPASR 15 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 YEDSDKPFVDS(0.997)PAS(0.003)R 113.49 3.5261e-07 8836900.0 3512.3 3687.1 3697.5 3704.9 4931.5 4078.5 3558.5 3036.3 5900.8 5818.1 5338.2 True False 4105.090372509476 3874.7576411225805 4221.861098890813 4612.600666319281 4206.08288271855 4510.084162910809 4205.033388029914 3466.7048232787683 4564.278221641307 4503.787169154059 4012.5776131750235 1.0230556934352355 0.965653007782349 1.0521568691976504 1.149535563168703 1.048224679544681 1.1239867730164912 1.0479631282951325 0.8639595685068073 1.1374928192428757 1.1224174591330476 1.0 11.970313582457102 -5.846042166730324 7.413550745174067 1.0595943009613342 0.9947318582037111 0.09846505614827328 0.0774668545527363 0.3992355039493762 29.455121517330994 0.011068838390268863 0.034907320985236794 1.4254691845381164e-06 5.846042166730324 -0.0648624427576231 YEDSDKPFVDS(ph)PASR ddPTM_A549_PD325901_60min_R1 2 YEDSDKPFVDSPASR 15 1 E9PQ01;O94913;E9PKN0 E9PQ01;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 YEDSDKPFVDS(0.986)PAS(0.013)R;YEDSDKPFVDS(1)PASR 143.04 4.6339999999999995e-14 50016000.0 7037.0 7275.3 6835.5 7522.700000000001 8331.2 8615.0 8329.2 7985.7 7990.5 8598.2 8284.1 True False 7751.391059634404 7888.4150636675695 7299.39813520067 7987.360093708712 7746.04525307971 8544.842296294142 8646.172263913128 7826.41894883954 7654.687072712251 8055.3081846220075 7265.208217236604 1.0669193267227137 1.0857796263777295 1.0047059790912738 1.09939864830836 1.06618351759036 1.176131783260062 1.1900790734944398 1.0772463382771977 1.0536087671309426 1.1087511801122096 1.0 12.826788430031568 -9.286569106295426 1.278046384173333 1.0146862686223999 1.096261442143984 0.0040310908092062725 0.0567054921601134 0.3512280735026535 1.1917346813513192 0.012539828483065422 0.010684283213262516 5.169289960663345e-10 9.286569106295426 0.08157517352158417 YEEEEEQS(ph)R ddPTM_A549_MK2206_60min_R1 2 YEEEEEQSR 9 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 YEEEEEQS(1)R;YEEEEEQS(1)R 84.507 0.0013477 13946600.0 1166.6 1100.26 960.75 1278.6100000000001 1222.79 1007.73 1024.32 1408.9 1485.38 1198.31 1504.3400000000001 True False 1363.493559368378 1156.2585344095723 1096.9987966894791 1591.8695073989848 1042.919210820118 1114.367319722964 1210.425684987158 1608.6158895752915 1148.9438016644465 927.6109387375612 1130.7708603281478 1.2058088930348758 1.0225400874532866 0.9701335922037573 1.4077737260907368 0.9223081770231191 0.9854934883974429 1.0704429406996698 1.422583430482524 1.0160712855043195 0.8203350221355811 1.0 10.143090895545736 -8.95750773433548 24.9992160424983 1.007089395121917 1.1199561658084873 0.16162615431478222 0.16740086623811407 245.0260154705927 144155.19531761305 0.026495958211039627 0.02818513920610274 1.1027885941505574e-09 8.95750773433548 0.11286677068657025 YEEEEEQS(ph)R ddPTM_A549_PD325901_60min_R1 2 YEEEEEQSR 9 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 YEEEEEQS(1)R;YEEEEEQS(1)R 104.82 0.00059367 16754700.0 2736.5 2809.3999999999996 2687.5 2818.3 3167.8999999999996 2835.9 2882.3 2779.8 2659.6 3299.4 2990.6 True False 3014.307465495173 3046.1579975901564 2869.889911250354 2992.379990176301 2945.397632661705 2812.8053706396486 2991.9875037550787 2724.3547082890877 2547.8262610081356 3091.0753209208715 2622.7751589753607 1.1492816893510507 1.161425517992247 1.094218809198854 1.1409212794837258 1.1230080560212348 1.0724538704791329 1.140771634013782 1.0387297969351712 0.971423818884839 1.1785513944429997 1.0 11.356878420539985 -8.44725608495237 3.2228880254962817 0.9866928933939526 1.124586312680825 0.07704100493289989 0.06295706787642853 0.06398112801022932 1.2957962877274976 0.004353035061250932 0.005229435459335785 3.570622316802186e-09 8.44725608495237 0.1378934192868725 YEEEEEQS(ph)RSMSR ddPTM_A549_MK2206_60min_R1 3 YEEEEEQSRSMSR 13 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 YEEEEEQS(0.474)RS(0.31)MS(0.217)R;YEEEEEQS(0.478)RS(0.335)MS(0.187)R;YEEEEEQS(0.36)RS(0.28)MS(0.36)R 55.173 0.0041692 23615700.0 1425.34 2456.8 2092.67 1958.12 1966.98 1822.35 1627.5900000000001 1258.75 2065.58 3437.89 2670.1400000000003 True False 1665.902545782723 2581.84062615876 2389.4420732429585 2437.8594879033462 1677.6398476426498 2015.1898674219717 1923.3020351337946 1437.181667260202 1597.7294280534597 2661.2682612817007 2007.0705458849716 0.83001693647404 1.2863726347099358 1.190512250873269 1.2146356753137584 0.83586491321008 1.0040453593191565 0.9582632952673613 0.7160593683200656 0.7960504583803644 1.3259465476876278 1.0 10.97087561108346 -6.76275522609082 24.999601407395517 0.8951918226809078 1.1458212569642074 0.14312509819929475 0.18684423655936683 26.03771847884145 494702.99002551765 0.020020630342736573 0.03936746844921659 1.726810870403976e-07 6.76275522609082 0.25062943428329965 YEEEEEQS(ph)RSMSR ddPTM_A549_PD325901_60min_R1 3 YEEEEEQSRSMSR 13 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 YEEEEEQS(0.465)RS(0.412)MS(0.123)R;YEEEEEQS(0.504)RS(0.281)MS(0.215)R;YEEEEEQS(0.44)RS(0.245)MS(0.315)R 53.328 0.0050509 40071000.0 3127.12 3068.59 3338.3599999999997 3553.91 4013.63 3620.13 4383.93 4041.5899999999997 3601.87 3680.48 3110.3100000000004 True False 3444.582920335928 3327.1908485175404 3564.92118478948 3773.426949184776 3731.726475071817 3590.6488615302756 4550.762855128545 3960.977316883982 3450.495929740327 3448.0938646853533 2727.761587879573 1.262787384220619 1.2197513387172279 1.3069035067542956 1.3833419188654428 1.3680544852795131 1.3163352975878908 1.6683140034485502 1.452098062559437 1.2649550991084129 1.2640744997680426 1.0 11.413501839942564 -9.86552887208384 0.9235191688743623 1.0342890886758034 1.366637644753758 0.25215490461391477 0.13476640401468193 0.283287514171135 0.49630244571409526 0.04586661787726312 0.02544381609920223 1.3629223955292325e-10 9.86552887208384 0.33234855607795466 YEEEEEQSRS(ph)MSR ddPTM_A549_PD325901_60min_R1 1 YEEEEEQSRSMSR 13 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 YEEEEEQS(0.068)RS(0.494)MS(0.438)R 45.083 0.014706 4087600.0 1049.1 1505.0 1303.6 1243.6 1155.6 1124.5 1174.0 1565.0 1001.6 1400.1 1550.8 True False 1155.6038596933993 1631.8316317979602 1392.0701351836128 1320.41434757948 1074.4346426035756 1115.3424448267865 1218.6772124374502 1533.7848472812498 959.5062351578243 1311.6974470574385 1360.0614313311662 0.8496703406715583 1.199822003775813 1.0235347485893471 0.97084904928678 0.7899897885876875 0.8200676963062912 0.89604571114458 1.1277320361772563 0.7054874236222575 0.9644398531128177 1.0 10.409456101340092 -6.53514030435769 4.7036170718073675 0.8738019099827731 1.036844531599932 0.12657390478264585 0.13121798227580594 0.23781227066335817 13.773051860577315 0.02065874231640797 0.045811130976782403 2.916484654316168e-07 6.53514030435769 0.16304262161715888 YEEIVK ddPTM_A549_MK2206_60min_R1 1 YEEIVK 6 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 115.3 0.055205 17697000.0 3587.2 3263.0 3240.4 3095.4 4092.1 2633.4 3072.4 3345.2 4732.7 3845.2 4434.1 False True 4192.63166138029 3429.0727626001435 3699.9374455296256 3853.773138957788 3490.15751077209 2912.0646400905557 3630.615310210235 3819.3923442453424 3660.7510065689107 2976.5666493926174 3332.9905950656344 1.257918839491273 1.0288276143583348 1.1100953753086618 1.1562508291091946 1.0471549232509492 0.8737092281033605 1.089296596151583 1.1459355300611431 1.0983382347338493 0.8930618207562034 1.0 11.70260153116176 -3.2329899257641297 1.6264991356977778 1.0543152763100703 153.27263609507102 0.30390572082135203 0.08993610204870997 960.8080226634487 4.291992725447318 0.011331100530782283 544444.7833386846 0.0005848036495518669 3.2329899257641297 152.21832081876096 YEEIVK ddPTM_A549_PD325901_60min_R1 1 YEEIVK 6 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 115.3 0.055205 61486000.0 7113.2 8111.6 7510.4 7425.4 9331.1 7877.4 8511.2 8284.9 8467.3 8333.9 7903.4 False True 7835.326827538929 8795.192999662679 8020.100907704057 7884.0500936930475 8675.715726547449 7813.249066143648 8835.098373507351 8119.651170121683 8111.448826828917 7807.69613172773 6931.331903780461 1.1304215317211133 1.2689037434299801 1.157079334684545 1.1374509550455891 1.251666468578077 1.1272363197442867 1.2746609881267617 1.171441691559034 1.1702583196751553 1.1264351844800975 1.0 12.758916887580044 -10.410235700973466 0.6173489055241338 0.9879288354635423 1.1935690301083566 0.30372934311571675 0.06292628475307789 0.39786027712142313 0.25605764707901824 0.042603766630624824 0.010404792370618874 3.8883405909659735e-11 10.410235700973466 0.2056401946448143 YEEQERS(ph)PR ddPTM_A549_MK2206_60min_R1 1 YEEQERSPR 9 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 YEEQERS(1)PR 45.077 0.014152000000000001 14415000.0 565.69 497.12 407.18 322.99 746.21 487.68 509.09 376.62 586.14 633.55 570.41 True False 661.1646422073534 522.4212846288023 464.9242467197733 402.122564499572 636.4434974984096 539.285973904216 601.5850632323027 430.00703835037683 453.3802258732436 490.4306149804156 428.76145448487614 1.5420337702737104 1.2184427475096873 1.0843424516281297 0.9378701380297613 1.48437666408947 1.257776248921738 1.4030763655167202 1.002905074260925 1.0574183409699107 1.143830934078788 1.0 8.744031403585621 -8.281577778088325 24.328605982480557 1.026056121717403 1.2602524407258862 0.29065924391559994 0.16589408607834102 514.6986122707455 621790.6166760345 0.026523557554575024 0.03208802580243235 5.229043105143676e-09 8.281577778088325 0.23419631900848326 YEEQERS(ph)PR ddPTM_A549_PD325901_60min_R1 2 YEEQERSPR 9 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 YEEQERS(1)PR;YEEQERS(1)PR 55.567 0.0048519 28549000.0 1368.87 1026.57 811.69 996.85 974.99 905.25 922.51 776.8 1010.3599999999999 1003.81 1260.75 True False 1507.836674691166 1113.0826566477283 866.7761644884836 1058.423160489389 906.510065932901 897.8779441346813 957.6166228668415 761.3061146121887 967.8980828215448 940.4292652887142 1105.6857425527267 1.363711782346024 1.0066898882841016 0.7839263283682523 0.9572549593031549 0.8198623090137861 0.8120552789816446 0.8660839025164293 0.6885375159623028 0.8753826205508739 0.8505393794058695 1.0 10.110725686433598 -5.307593230658474 3.1833787482403437 0.8946150845953131 1.4092973912137288 0.7250092989194793 0.08871703567228591 0.14122298231874436 2.277588658535509 0.014041374228321076 0.16828608417267962 4.925006061447044e-06 5.307593230658474 0.5146823066184156 YEGLT(ph)KNYMDYLS(ph)R ddPTM_A549_PD325901_60min_R1 1 YEGLTKNYMDYLSR 14 1 Q9NV70;Q9NV70-2 Q9NV70;Q9NV70-2 EXOC1 Exocyst complex component 1 2 Y(0.002)EGLT(0.541)KNY(0.459)MDY(0.458)LS(0.54)R 49.368 0.057936 9527000.0 2193.6 2613.5 2401.6 2067.3 2817.4 2175.1 2186.7 2186.3 2607.8 2561.7 3038.8 True False 2416.2926571570288 2833.7488170790493 2564.5870179939902 2194.9924258210503 2619.515543502348 2157.386706752108 2269.9160651081525 2142.692531380829 2498.203234868784 2399.953824817543 2665.0468645403325 0.906660475396102 1.0633016832774589 0.962304660423422 0.8236224492058389 0.982915376969989 0.8095117333421504 0.8517358907681601 0.8039980684356187 0.9373956113524758 0.9005296892711443 1.0 11.37994518749474 -9.623430368685101 1.4146295765245147 0.9853196833777622 0.9043128701966062 0.013645582373982612 0.08068549103988805 0.4945503189422172 2.009041139291426 0.020069760152133503 0.015006479244235597 2.3799598541572227e-10 9.623430368685101 -0.08100681318115599 YEMAS(ph)NPLYR ddPTM_A549_MK2206_60min_R1 2 YEMASNPLYR 10 0 P18084 P18084 ITGB5 Integrin beta-5 1 YEMAS(1)NPLYR;YEMAS(1)NPLYR 121.36 4.4335e-05 12866100.0 8544.0 8053.6 7052.3 5569.0 9797.7 7949.9 7490.2 6976.1 10194.8 11320.3 12166.7 True False 9986.01831925547 8463.49384029314 8052.422184640346 6933.405250001909 8356.47130893471 8791.153141283468 8851.072385280786 7964.983538410242 7885.694077750269 8763.036367710196 9145.372606162478 1.0919203349381887 0.9254400235798087 0.8804914278959325 0.7581326151030667 0.9137376538714039 0.9612679023443699 0.9678197670499087 0.8709304564631026 0.8622605570424333 0.958193476097994 1.0 13.158826234965431 -7.009792880211252 24.61131528055 0.9326900055544336 0.9028597116938214 0.011044799526745863 0.08185712062546417 1603.4573174039142 4029802.864430227 0.013120766308513755 0.023815870288345267 9.777033872266e-08 7.009792880211252 -0.0298302938606122 YEMAS(ph)NPLYR ddPTM_A549_PD325901_60min_R1 2 YEMASNPLYR 10 0 P18084 P18084 ITGB5 Integrin beta-5 1 Y(0.001)EMAS(0.999)NPLYR;YEMAS(1)NPLYR 67.08 0.0016887999999999998 12024000.0 7252.6 8400.4 7913.0 7705.6 8481.9 8370.8 7473.4 8447.7 8991.1 8943.0 9826.2 True False 7988.8786129180735 9108.331189206358 8450.023764734528 8181.557411312676 7886.1606049664815 8302.630980129898 7757.804326601402 8279.203996407556 8613.235334392486 8378.337453778073 8617.639693413923 0.9270379009955146 1.0569403587582629 0.9805496708330128 0.9493965520008308 0.9151183950047855 0.9634460566360448 0.9002237970717603 0.9607275647338773 0.9994889135333886 0.9722311156941572 1.0 13.073077064777642 -8.750441602142173 6.414199991735961 0.9998146979795973 0.9574275633680549 0.11527134531754535 0.03964503041798821 0.18885859837714186 31.061780463323508 0.006766191968885547 0.007489552435581552 1.7764721273954855e-09 8.750441602142173 -0.04238713461154242 YEPAAVS(ph)EQGDKK ddPTM_A549_PD325901_60min_R1 1 YEPAAVSEQGDKK 13 1 P05023-2;P05023-4;P05023 P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 1 YEPAAVS(1)EQGDKK 58.81399999999999 0.0044661 6130000.0 3345.1 3462.2 2996.6 3375.6 3996.2 2723.5 2925.7 3553.6 3529.0 3352.9 4315.2 True False 3684.692089467534 3753.971744591956 3199.9672960196503 3584.1031454561708 3715.5206981415786 2701.3207189735485 3037.039114504469 3482.720660254728 3380.6884024280744 3141.197321790506 3784.457756306582 0.9736380551024003 0.9919444174891838 0.8455550311499945 0.9470585685580631 0.9817841649704971 0.7137933339253034 0.8025031087857746 0.9202693977627241 0.8933085319275532 0.8300257326312814 1.0 11.885870887824515 -10.515255963755576 0.8666530648904677 0.9987598882016898 0.894810192513385 0.0 0.09403467354188343 0.8264969226439861 1.1309238053602106 0.05256104815426755 0.015593325608893207 3.053121139402709e-11 10.515255963755576 -0.10394969568830481 YEPQS(ph)PGYEPR ddPTM_A549_MK2206_60min_R1 2 YEPQSPGYEPR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 YEPQS(1)PGYEPR;YEPQS(1)PGYEPR 161.21 1.9714e-13 113927000.0 16477.1 19196.7 15101.5 15940.900000000001 25959.0 20921.9 18893.1 19550.2 27414.0 23194.0 23478.0 True False 19258.031653581962 20173.73003426483 17243.11977955365 19846.421215614188 22140.465487679357 23135.841571166762 22325.731713752415 22321.50071997648 21204.772771162352 17954.459291067407 17647.76464016395 1.0912448146409013 1.1431323142395111 0.9770710416383623 1.1245855563172227 1.2545761992592888 1.3109785881047327 1.2650741988558731 1.2648344521308796 1.2015557326112072 1.0173786684691761 1.0 14.107197835182696 -4.236702788213661 16.147983579581876 1.1362168681398077 1.1402773516192086 0.0 0.11368896772035343 0.0 0.0 0.017054709773624603 0.0 5.798253673172749e-05 4.236702788213661 0.0040604834794009115 YEPQS(ph)PGYEPR ddPTM_A549_PD325901_60min_R1 2 YEPQSPGYEPR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 YEPQS(1)PGYEPR;YEPQS(1)PGYEPR 155.14 3.8301e-13 140058000.0 46674.0 47132.0 48876.0 46060.0 55347.0 47063.0 46792.0 48273.0 50190.0 51843.0 55137.0 True False 51412.31012041725 51103.97904976837 52193.01927526411 48905.021590150274 51459.617656784474 46679.73453168793 48572.6951655649 47310.15714556408 48080.688840426505 48569.62413241827 48355.49854224048 1.063215387501517 1.0568390480997105 1.079360586669816 1.0113642308419126 1.0641937154640733 0.965344912966026 1.0044916634068966 0.978382160701678 0.9943168882526583 1.0044281539149214 1.0 15.561392328581192 -7.250142344118744 24.989164617460485 0.9942757087332943 1.0540268229769523 0.7348363035477617 0.019039204730083643 284.88786991371023 630175.4683458126 0.0025882377535421885 0.004458735838848388 5.6215704271101256e-08 7.250142344118744 0.05975111424365798 YEPSDKDRQS(ph)PPPAK ddPTM_A549_MK2206_60min_R1 8 YEPSDKDRQSPPPAK 15 2 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 YEPSDKDRQS(1)PPPAK;YEPS(0.001)DKDRQS(0.999)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPS(0.005)DKDRQS(0.994)PPPAK;YEPS(0.001)DKDRQS(0.999)PPPAK;YEPSDKDRQS(1)PPPAK;YEPS(0.018)DKDRQS(0.982)PPPAK 156.73 3.6852e-20 945292800.0 47019.35 47894.0 46974.59999999999 44083.380000000005 57232.38 46229.79 43225.4 47144.86000000001 59755.9 66119.74 65691.6 True False 54955.06676726174 50331.600028186076 53636.304631766434 54883.81007897812 48813.57271727535 51121.79569294903 51078.895661359624 53827.78828007849 46221.284060563965 51183.24481184618 49378.562724073316 1.1129337051454868 1.0193006286845228 1.0862265256987191 1.1114906358386338 0.9885579900339521 1.03530343680955 1.03443463809969 1.0901043957246666 0.9360597293778643 1.0365478861314252 1.0 15.591597223704724 -8.761178738443837 24.999999797750895 0.969805982114896 1.0570123256344395 0.2931111171861318 0.044351714367610345 4.38141915015492 420244.55235981534 0.007179821582978895 0.007896740401525538 1.7330905793724447e-09 8.761178738443837 0.08720634351954348 YEPSDKDRQS(ph)PPPAK ddPTM_A549_PD325901_60min_R1 4 YEPSDKDRQSPPPAK 15 2 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 YEPSDKDRQS(1)PPPAK;YEPS(0.003)DKDRQS(0.997)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK 124.25 5.2083000000000004e-08 1432470000.0 44711.200000000004 45849.4 46386.799999999996 44669.600000000006 57169.1 48575.4 47089.8 52004.7 49171.5 49851.200000000004 54056.4 True False 49250.24810935422 49713.28984648327 49534.88719448852 47428.7397399778 53153.73963868823 48179.818047522516 48881.82810752731 50967.425461602055 47104.99285349737 46703.58672434098 47407.80549175267 1.0388636976230017 1.048630902249455 1.0448677529084507 1.0004415780905271 1.1212022806652622 1.016284503105805 1.0310924034657347 1.0750851032425164 0.9936125995473895 0.9851455101094229 1.0 15.53283699177761 -8.781153567426516 24.932741338035456 0.9969837192945629 1.0463974695508194 0.39055387809210684 0.029994565587044216 167.68789842681528 212075.62166080961 0.004777870296573335 0.005089882858549313 1.6551845832897802e-09 8.781153567426516 0.049413750256256495 YEQGFITDPVVLS(ph)PKDR ddPTM_A549_MK2206_60min_R1 2 YEQGFITDPVVLSPKDR 17 1 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 Y(0.001)EQGFIT(0.194)DPVVLS(0.806)PKDR;YEQGFIT(0.033)DPVVLS(0.967)PKDR 48.656000000000006 0.0061687 4492100.0 1232.29 1374.44 1605.02 1130.27 1478.63 1092.06 1247.66 1075.78 1645.8200000000002 1429.84 1534.8000000000002 True False 1440.2704254020728 1444.393125292105 1832.6359705048633 1407.1862007397488 1261.125485729317 1207.6210643492411 1474.3436720273723 1228.2751094380765 1273.0443978344804 1106.8381509329924 1153.6668016749147 1.248428422583593 1.2520019846242507 1.588531426789961 1.2197509702946898 1.0931453378899278 1.04676763047701 1.2779631604956414 1.0646705856967056 1.1034766676012961 0.9594088599291098 1.0 10.172010894276177 -7.074709541040541 0.39904330946714067 1.0268790060922877 1.3932275112854482 0.48165522705527863 0.12125499069673833 1.1517149499631922 0.3025235129284984 0.03959310656723339 0.16595254205290172 8.419580603807666e-08 7.074709541040541 0.36634850519316053 YEQGFITDPVVLS(ph)PKDR ddPTM_A549_PD325901_60min_R1 2 YEQGFITDPVVLSPKDR 17 1 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 YEQGFIT(0.013)DPVVLS(0.987)PKDR;YEQGFIT(0.008)DPVVLS(0.992)PKDR 62.684 0.00086445 3085700.0 1995.2599999999998 2326.1 2185.6 2305.0 2970.7 2600.3 2294.7 2107.37 2737.5 2484.2 2438.8 True False 2197.81732636722 2522.128610448661 2333.927959080474 2447.374614965183 2762.0482803586397 2579.124018926716 2382.0260642080207 2065.336852150217 2622.4523949126847 2327.3471880437764 2138.8430608269605 1.0275729746704547 1.179202278391341 1.0912104781442384 1.1442516095682738 1.2913749170968738 1.2058500533131802 1.113698385746468 0.9656327245214883 1.226107909899075 1.0881336880995527 1.0 11.062614912245381 -11.033634604383568 1.2820139087383324 0.99873413678042 1.148845355171707 0.1067976801156747 0.09044041257801048 0.503714702193365 1.454329832926571 0.0667077370592749 0.014438440139138154 9.254765002857644e-12 11.033634604383568 0.15011121839128705 YES(ph)MLR ddPTM_A549_MK2206_60min_R1 2 YESMLR 6 0 Q9UIW2 Q9UIW2 PLXNA1 Plexin-A1 1 YES(1)MLR;YES(1)MLR 65.252 0.05756 4506600.0 884.46 1357.56 952.6800000000001 1047.5900000000001 1321.98 1195.06 995.51 1020.1800000000001 1548.49 1510.59 1790.74 True False 1033.7352250291067 1426.654005392414 1087.784349341799 1304.2495970281022 1127.5184932163165 1321.5204559833744 1176.3812809098392 1164.7936391702183 1197.759487430407 1169.3466698496816 1346.0498360902632 0.767976933180791 1.0598820096708113 0.8081308137159154 0.9689459944636419 0.8376498870883615 0.9817767667665732 0.8739507627197197 0.8653421351422458 0.8898329432656221 0.8687246478526874 1.0 10.394516109877245 -10.656134578038317 0.8779883777368289 1.0013994746043569 0.8987029762501859 0.0 0.08779219725281409 0.7509838862310204 1.0103524888803757 0.04993156732641115 0.012669636723767074 2.2073206282862095e-11 10.656134578038317 -0.10269649835417094 YES(ph)SEIR ddPTM_A549_MK2206_60min_R1 1 YESSEIR 7 0 A6PWM2;Q6UXH1-3;Q6UXH1-2;Q6UXH1-4;Q6UXH1;Q6UXH1-6;Q6UXH1-5 A6PWM2 CRELD2 Cysteine-rich with EGF-like domain protein 2 1 YES(0.869)S(0.131)EIR 111.95 0.0079664 11777000.0 1615.3 1433.9 1332.2 1292.3 2130.8 1724.0 1690.7 1599.2 2198.4 1803.5 1898.7 True False 1887.9231497066182 1506.8793853179122 1521.1259921412689 1608.913558013552 1817.3621426536922 1906.4325357014197 1997.8783052247234 1825.8914973445997 1700.465910123416 1396.0880974148517 1427.200388545843 1.3228157481306462 1.0558288782791414 1.0658110832572891 1.1273214125543045 1.2733755940925577 1.3357847650559151 1.3998582968859314 1.279351877983286 1.191469623866905 0.9782004745929959 1.0 10.478972197797155 -10.181614067723755 0.8980322254925139 1.0143681546951524 1.224378334776049 0.4192808755419276 0.10674979858647186 0.4687310775659012 0.7463814076751277 0.053562740919496483 0.022829305440590145 6.582425194176414e-11 10.181614067723755 0.21001018008089667 YESGPDGGEEDGTGS(ph)LKR ddPTM_A549_MK2206_60min_R1 1 YESGPDGGEEDGTGSLKR 18 1 Q07866-6;G3V5R9;G3V3H3 Q07866-6 KLC1 Kinesin light chain 1 1 YESGPDGGEEDGT(0.018)GS(0.982)LKR 158.89 4.6055e-23 20449000.0 4249.8 4690.0 3930.8 3699.4 6243.4 4506.3 4175.6 4498.5 6265.7 6630.1 6854.5 True False 4967.062342365625 4928.7009673903385 4488.246546996625 4605.75316607238 5325.004130581968 4983.153674960153 4934.252470158135 5136.176151078464 4846.528954266868 5132.3558051955715 5152.338475423963 0.9640403801221362 0.9565949502152569 0.8711086370596618 0.893915100500728 1.0335120947471907 0.9671634926022812 0.9576724226667033 0.9968631089703069 0.9406464612882538 0.9961216309208515 1.0 12.331011656991874 -6.7386038764069465 24.999940514370095 0.975364794585509 0.920334344397297 0.4271655123632997 0.034129271781429354 213.51820661212912 233755.14953576354 0.0052057919165177675 0.010830745740820439 1.825560051610213e-07 6.7386038764069465 -0.055030450188211955 YESLTDPSK ddPTM_A549_PD325901_60min_R1 2 YESLTDPSK 9 0 P08238;Q58FF7;Q58FF8;Q58FF6;G3V2J8;P07900;P07900-2 P08238;G3V2J8;P07900 HSP90AB1;HSP90AB3P;HSP90AB2P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha 0 ; 141.48 0.00010909 27346000.0 15518.7 15755.3 15526.599999999999 16303.7 18332.2 14736.3 15098.2 16914.7 16333.7 17677.4 18841.300000000003 False True 17094.14699973687 17083.054424230166 16580.32844503061 17310.74252061079 17044.60951465669 14616.292458604696 15672.770263052062 16577.323039174553 15647.2513909718 16561.245947156047 16523.939544841323 1.0345079606075878 1.0338366572857254 1.0034125578852586 1.0476159437423689 1.0315100384144118 0.8845525256819168 0.9484887196857972 1.0032306759649152 0.946944362057823 1.002257718397812 1.0 14.0122700665629 YESQEPLAGQES(ph)PLPLATR ddPTM_A549_MK2206_60min_R1 4 YESQEPLAGQESPLPLATR 19 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(0.996)PLPLAT(0.004)R;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(0.993)PLPLAT(0.007)R 346.99 6.124099999999997e-230 203352200.0 3888.34 5545.459999999999 4083.98 3696.48 5545.43 5222.05 4289.85 4563.77 6810.12 6397.139999999999 6414.47 True False 4544.596731214162 5827.700227425245 4663.149774347023 4602.117765941294 4729.704592986704 5774.6438648837575 5069.260216282178 5210.698373459454 5267.638693526964 4952.021630993314 4821.5800686341445 0.9425534091569185 1.2086702169142063 0.9671414158778033 0.9544833229835755 0.9809449445327852 1.19766628007478 1.051369083188988 1.0807034829425821 1.092512956031689 1.027053696195513 1.0 12.235290290791138 YESQEPLAGQES(ph)PLPLATR ddPTM_A549_PD325901_60min_R1 3 YESQEPLAGQESPLPLATR 19 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR 248.65 5.816999999999999e-97 310339800.0 6564.799999999999 6577.0 6389.1 6259.8 7678.3 6078.9 6953.299999999999 7781.5 6839.4 7691.1 8205.8 True False 7231.253663249663 7131.266871983509 6822.702746779399 6646.453628962717 7139.002696696984 6029.395453852874 7217.9116364917545 7626.291878031345 6551.963802654172 7205.482633428659 7196.538620852005 1.0048238527195659 0.990930119004799 0.9480533776349904 0.9235625596039443 0.9920050558766806 0.8378188142258658 1.002969902166275 1.0597166609978481 0.9104326604556564 1.0012428214517934 1.0 12.813087452984648 -4.41565086039302 0.0016014369440876185 1.908598724782164 1.1032429077277254e-05 0.0 0.05815295525832516 2236811.7046766467 423.2598970755446 248349.5572479774 256142.3063179529 3.8401584085023044e-05 4.41565086039302 -1.908587692353087 YESQLS(ph)TNEEKVDTDDRTEGYLR ddPTM_A549_MK2206_60min_R1 2 YESQLSTNEEKVDTDDRTEGYLR 23 2 K7EQ91;Q13433-2;Q13433 K7EQ91 SLC39A6 Zinc transporter ZIP6 1 YES(0.023)QLS(0.957)T(0.02)NEEKVDTDDRTEGYLR;YES(0.191)QLS(0.783)T(0.025)NEEKVDT(0.002)DDRTEGYLR 148.89 4.5603e-28 113359000.0 2827.7 3327.0 3235.8 2849.9 3824.2999999999997 2870.2 2788.2 2747.35 4811.200000000001 4194.8 4705.6 True False 3304.946629372504 3496.330089234039 3694.685096359947 3548.125627936873 3261.7505360195764 3173.922658915437 3294.7798489546203 3136.7952759065074 3721.470881907649 3247.1917665848746 3537.069652046829 0.934374200819031 0.9884821146258133 1.0445610236207559 1.0031257444658026 0.9221618053611325 0.8973311161907014 0.9314998496136482 0.8868344659515848 1.052133898396406 0.9180457514331932 1.0 11.788338913560446 -8.783213920758765 24.99946069394875 1.024618787177134 0.9537424019366662 0.0 0.05571084230203698 222.40526789800526 255343.41049456672 0.008948809297386758 0.009530636439053101 1.6473507548504921e-09 8.783213920758765 -0.0708763852404678 YESQLS(ph)TNEEKVDTDDRTEGYLR ddPTM_A549_PD325901_60min_R1 2 YESQLSTNEEKVDTDDRTEGYLR 23 2 K7EQ91;Q13433-2;Q13433 K7EQ91 SLC39A6 Zinc transporter ZIP6 1 YESQLS(0.726)T(0.274)NEEKVDTDDRTEGYLR;YESQLS(0.897)T(0.103)NEEKVDTDDRTEGYLR 319.24 1.4211999999999993e-196 232080000.0 27207.0 30885.0 32176.0 31471.0 38248.0 32781.0 32258.0 31353.0 28692.0 32460.0 33229.0 True False 29969.03461126519 33487.78734091691 34359.6568500061 33414.892194173226 35561.59242843682 32514.04240450589 33485.595842254894 30727.63981904731 27486.1750191177 30410.47006034174 29142.043655986174 1.0283779327572704 1.1491228184348032 1.179040744554926 1.14662144455711 1.2202847833265114 1.1157090692857796 1.1490476178521714 1.0544092302440646 0.9431793920695629 1.043525650408358 1.0 14.830814432963312 -8.477414230979859 3.08283909723107 0.9733435181431448 1.1451586975327939 0.6098267688374739 0.050707778265322564 0.09564629350567094 1.8219443744716814 0.008053185652841249 0.009589735353430493 3.3310854157465337e-09 8.477414230979859 0.17181517938964908 YESQNTELKTQS(ph)PEFEAQSSK ddPTM_A549_MK2206_60min_R1 2 YESQNTELKTQSPEFEAQSSK 21 1 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 YESQNT(0.001)ELKT(0.02)QS(0.979)PEFEAQSSK;Y(0.001)ES(0.016)QNT(0.021)ELKT(0.111)QS(0.849)PEFEAQS(0.001)SK 86.32 4.0989e-06 10916300.0 3996.5 4722.9 5125.9 5325.3 7120.5 4536.5 4191.2 4820.1 7176.0 7038.1 7168.7 True False 4671.0114949560475 4963.275436863074 5852.829697580645 6629.998739061802 6073.083882469309 5016.549418915016 4952.6867882284605 5503.363935937159 5550.647457717262 5448.188321827264 5388.513943945111 0.8668459511373638 0.9210842708201835 1.0861676815659482 1.2303946520379156 1.127042436123493 0.9309708522795864 0.9191192302274034 1.0213138526107186 1.030088724917254 1.011074366421415 1.0 12.395671742927078 -7.264399208991593 24.903063265827296 1.0020050429051375 1.0517917509602401 0.07451465737463947 0.09685813224640158 666.1451924923938 5604740.521971117 0.015546514780224114 0.025460665651175142 5.440023690722465e-08 7.264399208991593 0.04978670805510266 YESQNTELKTQS(ph)PEFEAQSSK ddPTM_A549_PD325901_60min_R1 2 YESQNTELKTQSPEFEAQSSK 21 1 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 YESQNTELKT(0.045)QS(0.955)PEFEAQSSK;YESQNTELKT(0.005)QS(0.995)PEFEAQSSK 153.84 6.2259e-24 30518000.0 5579.799999999999 6921.8 6842.8 7458.4 8055.0 7754.4 7207.3 7158.6 8320.1 8399.3 8566.099999999999 True False 6146.2571883683395 7505.1243780592085 7307.193557099136 7919.088428744605 7489.244588241431 7691.250737363127 7481.57774548589 7015.816107186938 7970.4351309271315 7868.966764566497 7512.5240049818885 0.8181347819045215 0.9990150278497915 0.9726682473498137 1.0541182195881311 0.9969012522655476 1.0237905039987516 0.9958807107337725 0.9338826874342683 1.0609530333136483 1.047446471964447 1.0 12.875081980377823 -4.548853009317675 1.3508774356125952 1.0182116236401453 4.3354322614027295e-16 0.6903357952329667 0.03630610000832786 3.2251467479724063 1.2507295631666733 0.005437422002583923 7.217131305184023 2.8258362415262236e-05 4.548853009317675 -1.0182116236401448 YESQQNGT(ph)PLKVK ddPTM_A549_PD325901_60min_R1 2 YESQQNGTPLKVK 13 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 YES(0.004)QQNGT(0.996)PLKVK;Y(0.001)ES(0.004)QQNGT(0.995)PLKVK 52.861999999999995 0.0091795 7144500.0 4253.2 3531.4 4669.799999999999 4821.6 5391.4 5197.1 5549.0 5138.299999999999 5603.8 4760.8 5012.799999999999 True False 4684.9817329596435 3829.003471449378 4986.720709788612 5119.4192813518985 5012.726663320281 5154.776540693014 5760.17023152931 5035.812575581628 5368.291773739433 4460.20227551679 4396.257378757335 1.0656750343138284 0.8709689041299263 1.1343104554988954 1.164494896520134 1.1402259311617464 1.1725374782652251 1.3102440861088767 1.1454771961065375 1.2211049789029544 1.0145453032546357 1.0 12.102060135959967 -5.785463968376356 24.435276185216736 1.1352456882496185 0.9683220302272946 0.352241238749592 0.09154633225007909 148.01451735051634 150545.04668880947 0.014447757831107225 0.044956955779731654 1.6388380232823775e-06 5.785463968376356 -0.1669236580223239 YESS(ph)EIR ddPTM_A549_MK2206_60min_R1 1 YESSEIR 7 0 A6PWM2;Q6UXH1-3;Q6UXH1-2;Q6UXH1-4;Q6UXH1;Q6UXH1-6;Q6UXH1-5 A6PWM2 CRELD2 Cysteine-rich with EGF-like domain protein 2 1 YES(0.261)S(0.739)EIR 100.02 0.011314 11880000.0 1757.2 1545.2 1321.1 1146.7 1997.6 1504.8 1948.0 1729.2 1796.0 2147.8 1930.9 True False 2053.7724005847044 1623.844079917175 1508.4518452318207 1427.641551477319 1703.7556862047195 1664.0369371946017 2301.9263846795766 1974.3193954529013 1389.208867622659 1662.6104882881173 1451.4042398710535 1.415024390976815 1.1188089681076316 1.0393051114180536 0.9836277945585679 1.173867100151289 1.146501361565844 1.5859994903171053 1.3602822295932557 0.9571481393399264 1.145518555489288 1.0 10.503233674249442 -8.780953715977347 24.85874283312953 0.9797643617200166 1.2172786429365376 0.18068451657081874 0.17235310511176977 216.11352166540203 275299.55932223256 0.03053349096836184 0.0325282654190854 1.6559464330805412e-09 8.780953715977347 0.23751428121652107 YESS(ph)EIR ddPTM_A549_PD325901_60min_R1 2 YESSEIR 7 0 A6PWM2;Q6UXH1-3;Q6UXH1-2;Q6UXH1-4;Q6UXH1;Q6UXH1-6;Q6UXH1-5 A6PWM2 CRELD2 Cysteine-rich with EGF-like domain protein 2 1 YES(0.238)S(0.762)EIR;YES(0.238)S(0.762)EIR 101.72 0.010864 29943000.0 4471.4 4579.7 4170.4 3877.7 5107.4 4365.5 3592.2 4534.0 4725.1 4795.1 5184.1 True False 4925.333236329296 4965.6473914585495 4453.428422652458 4117.216722104332 4748.673843573473 4329.948815376912 3728.903136727265 4443.565813145809 4526.520478977867 4492.336567663116 4546.488564717503 1.0833268722045784 1.0921939692082103 0.9795314250238684 0.9055816733061893 1.0444706449775338 0.9523720897439348 0.8201721138517724 0.9773621444095529 0.9956080202434476 0.9880892701513365 1.0 12.150537008857933 -5.763560273165939 23.46787485864186 0.9776562113141992 1.0877604752174348 0.39545938803822633 0.057265500497101524 19.868871390245584 219884.32860666403 0.008186064290844734 0.027453242186114415 1.723612864378166e-06 5.763560273165939 0.11010426390323558 YESSS(ph)YTDQFSR ddPTM_A549_MK2206_60min_R1 2 YESSSYTDQFSR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 YESS(0.007)S(0.624)YT(0.369)DQFSR;YES(0.001)S(0.274)S(0.724)YT(0.002)DQFSR 205.8 3.3512e-25 10995900.0 3355.1000000000004 3744.0 4189.9 3300.6 4892.3 4586.4 4233.9 4666.8 6862.299999999999 6131.0 5646.299999999999 True False 3921.3588556804775 3934.553608083033 4784.090823054121 4109.247148169563 4172.649150790622 5071.729803794076 5003.144825510712 5328.333191475598 5308.000006841299 4746.00284183557 4244.167880047607 0.9239405618508408 0.9270494757240609 1.127215265339706 0.9682103216245701 0.983148939608821 1.1949880276029956 1.178828210125984 1.255448262667647 1.2506574096173029 1.1182410724484193 1.0 12.05126600852125 -7.249771813376225 23.25204371954088 1.1423729857851266 0.9895093506525929 0.5251461261872594 0.08373052645884078 289.916780173785 577766.9556580131 0.0166459886264587 0.02864999415119204 5.6263686770867387e-08 7.249771813376225 -0.15286363513253365 YETPSDAIEVIS(ph)PAS(ph)SPAPPQEK ddPTM_A549_PD325901_60min_R1 2 YETPSDAIEVISPASSPAPPQEK 23 0 O75376-2;O75376;A0A088AWL3;E7EVK1 O75376-2 NCOR1 Nuclear receptor corepressor 1 2 YETPSDAIEVIS(0.937)PAS(0.615)S(0.448)PAPPQEK;YETPSDAIEVIS(0.78)PAS(0.675)S(0.545)PAPPQEK 89.565 3.8422e-07 4094600.0 1371.1 1619.7 1374.8 1626.6 1926.1 1356.7 1643.4 1364.0 1613.9 1641.3 1685.0 True False 1510.2930626495283 1756.197803337644 1468.1021953439947 1727.0713877233702 1790.817380684274 1345.6514850124518 1705.9404863029863 1336.793949962701 1546.0733954884304 1537.6680378939902 1477.7556820950576 1.0220181055290152 1.1884222978238397 0.993467467682224 1.1687123985710888 1.2118494297686473 0.9106048457920203 1.1544130785438256 0.9046109354609206 1.0462307228597603 1.0405428018479976 1.0 10.529192052545495 -7.257573442214434 24.993583695639963 1.0166679923770399 1.116889509513986 0.26720280770464666 0.08819152766735848 350.2395208932976 2264323.760365135 0.011731535579270466 0.01984968313293344 5.526199481693863e-08 7.257573442214434 0.10022151713694605 YETSSTSAGDRYDS(ph)LLGR ddPTM_A549_MK2206_60min_R1 2 YETSSTSAGDRYDSLLGR 18 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;H0YIM2;H0YIS3 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 YETSSTSAGDRYDS(0.999)LLGR;YETSS(0.002)T(0.002)S(0.002)AGDRYDS(0.992)LLGR 97.69 4.2292000000000003e-07 26613000.0 1550.62 1895.67 1975.71 1453.75 1846.97 1598.19 1816.2 1644.42 2309.51 2522.8999999999996 2909.7 True False 1812.3267469807943 1992.1515059387714 2255.8953865286194 1809.9188152613185 1575.283159666365 1767.3094050073385 2146.1800307264098 1877.5215708250419 1786.4096725296254 1952.9751377698528 2187.1411863653234 0.8286281463121224 0.9108472367297908 1.031435647863938 0.8275271969383523 0.7202475859751112 0.8080454138145157 0.9812718283143922 0.8584363837732765 0.8167783971451568 0.8929351017413664 1.0 11.094830638241781 -10.906697128332876 1.1094875343387456 1.0014944029598332 0.8632731449200683 0.07145032582845745 0.08680249161542375 0.5845680947271099 1.2552202856737718 0.06343245756197338 0.014431104513352352 1.239660809453147e-11 10.906697128332876 -0.13822125803976482 YETSSTSAGDRYDS(ph)LLGR ddPTM_A549_PD325901_60min_R1 2 YETSSTSAGDRYDSLLGR 18 1 O14974-5;O14974-4;O14974-2;O14974;O14974-3;H0YIM2;H0YIS3 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 YETSSTSAGDRYDS(1)LLGR;YETSSTSAGDRYDS(1)LLGR 250.27 5.700099999999998e-87 50706000.0 9351.2 9557.0 9790.8 9763.7 11594.2 11100.1 9306.2 11055.4 9965.4 11097.4 10925.5 True False 10300.526940010408 10362.40193029441 10455.26256486324 10366.781574028442 10779.8633898186 11009.704465826424 9660.352533548035 10834.891374206478 9546.588893611997 10396.708270105864 9581.732762450772 1.0750171389016892 1.0814747381499672 1.0911661621200381 1.0819318207928055 1.125043210562405 1.1490306334749427 1.0082051725973156 1.1307862202822674 0.9963322011049507 1.0850551281130325 1.0 13.226070861473715 -8.77578774181721 24.983236055801502 0.9982679710128006 1.092160565949837 0.2485613036358022 0.04359773177646338 105.40064801791875 183521.90044207583 0.005681176712373668 0.006061540892604436 1.675761691919959e-09 8.77578774181721 0.09389259493703639 YEYDPDIS(ph)PPR ddPTM_A549_MK2206_60min_R1 2 YEYDPDISPPR 11 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 YEYDPDIS(1)PPR;YEYDPDIS(1)PPR 178.95 8.4724e-16 60654000.0 14206.8 15500.3 12856.900000000001 12894.2 17296.6 15032.5 13801.3 15249.1 18748.699999999997 18293.9 18372.5 True False 16604.560517087837 16289.19906286576 14680.201747756402 16053.279578842637 14752.293052667468 16623.229172234092 16308.817563079187 17410.70662341016 14502.149385521696 14161.29528433465 13810.101194795641 1.202348938858268 1.1795133745293895 1.063004647155566 1.1624302640803488 1.06822483373452 1.203700750469416 1.1809339651490165 1.2607225955716683 1.050111739296078 1.0254302328842715 1.0 13.753436270665684 -8.929004023711865 7.823055751119286 1.0219280617342996 1.1607417609146276 0.5678129039313995 0.05474187857379938 0.12984360814847404 12.386468100027843 0.009789848717868458 0.010375217178138697 1.1775950631238865e-09 8.929004023711865 0.13881369918032793 YEYDPDIS(ph)PPR ddPTM_A549_PD325901_60min_R1 2 YEYDPDISPPR 11 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 YEYDPDIS(1)PPR;YEYDPDIS(1)PPR 200.67 4.7211999999999995e-24 81705000.0 28471.0 27296.0 27025.0 27811.0 32059.0 27275.0 28235.0 28043.0 29338.0 32470.0 32677.0 True False 31361.35496075758 29596.329715320342 28859.07901452682 29528.82230663633 29807.286437545903 27052.881442997426 29309.498375784846 27483.6603656921 28105.025885643212 30419.838658635133 28657.936156569864 1.094334036806344 1.0327446314913835 1.007018748902853 1.0303890044736113 1.0401058287902059 0.9439926621092539 1.0227358388843926 0.9590244117907786 0.9807065565396657 1.06148043922072 1.0 14.80664709508483 -2.000000000002307 0.47902638677337644 0.9891155907707588 3.767516595566626 0.3510612461902639 0.03377017025837768 43.294323918188994 0.43298849125315697 0.00468510599652309 120.65444027471415 0.009999999999946878 2.000000000002307 2.778401004795867 YFDDEFTAQS(ph)ITITPPDR ddPTM_A549_MK2206_60min_R1 1 YFDDEFTAQSITITPPDR 18 0 P31751-2;P31751;M0R0P9;M0R283 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFT(0.01)AQS(0.33)IT(0.33)IT(0.33)PPDR 63.408 0.0026680999999999996 3760600.0 339.51 347.32 493.46 677.75 800.32 492.84 518.81 307.55 541.66 926.38 625.97 True False 396.81098777743694 364.99710447633504 563.44004810241 843.7987804253537 682.5939881774932 544.9920016792848 613.071061414585 351.14615433237344 418.97487485327963 717.1101146011478 470.5243731068841 0.8433377959940398 0.7757241183198441 1.197472607809881 1.793315774172822 1.450709096471046 1.1582651884336812 1.3029528255177547 0.7462868544168002 0.8904424484682443 1.52406582015306 1.0 8.878125646096652 -8.247556979877158 24.57155780858828 0.931670613261748 1.22849304663693 0.027618875917652552 0.3197805178468801 801.2489714976973 1418194.9881308768 0.04611748211634943 0.059372682118591265 5.655135562686485e-09 8.247556979877158 0.2968224333751819 YFDDEFTAQSIT(ph)ITPPDR ddPTM_A549_PD325901_60min_R1 1 YFDDEFTAQSITITPPDR 18 0 P31751-2;P31751;M0R0P9;M0R283 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQS(0.005)IT(0.87)IT(0.125)PPDR 141.0 1.3896e-16 7351000.0 1449.2 1851.4 2492.9 1861.3 1748.9 1706.3 1745.1 1557.3 1565.7 1877.0 1813.5 True False 1596.3217171553458 2007.4239754888645 2662.0831850254926 1976.2682736809963 1626.0632973774602 1692.4044585219624 1811.5107354553622 1526.238429821783 1499.899073868415 1758.4858996691758 1590.4509967236722 1.0036912299993948 1.2621727922609098 1.6737913903096555 1.2425835676497468 1.0223913221640586 1.0641034914048368 1.1389918577730926 0.959626189656791 0.9430652544204164 1.1056523610546036 1.0 10.635220206446554 -6.71640377580363 3.9746313394102186 0.9930972269845006 1.3288204152251586 0.37722944759608923 0.1576984025566937 0.13914457502744576 4.593239922999106 0.022061496239014648 0.046511487463321094 1.921304607299141e-07 6.71640377580363 0.33572318824065794 YFDDEFTAQSITIT(ph)PPDR ddPTM_A549_MK2206_60min_R1 1 YFDDEFTAQSITITPPDR 18 0 P31751-2;P31751;M0R0P9;M0R283 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQSIT(0.001)IT(0.999)PPDR 174.49 1.8874999999999998e-30 4046500.0 492.04 775.91 331.95 851.63 1093.8 808.67 525.21 781.9 1086.3 910.81 1241.0 True False 575.0843227769731 815.4005048204344 379.0255014947412 1060.279388231123 932.9034689480986 894.2429226482988 620.6338585716429 892.7367194683229 840.2547844646406 705.0573884149825 932.8254501424084 0.6164972478926027 0.874119059140113 0.40631985484195127 1.1366321406317303 1.000083637089531 0.9586390706983611 0.6653268931254982 0.9570244029384433 0.9007631431329027 0.7558299232802299 1.0 9.865463339691102 -6.26863916048252 24.996628811153887 0.9454987300503687 0.6564927517984263 0.3946862229689364 0.1569037293210027 359.749605265155 1249001.713703403 0.019498535199455512 0.04619308977816572 5.387171971806729e-07 6.26863916048252 -0.2890059782519424 YFDDEFTAQSITIT(ph)PPDR ddPTM_A549_PD325901_60min_R1 2 YFDDEFTAQSITITPPDR 18 0 P31751-2;P31751;M0R0P9;M0R283 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFT(0.009)AQS(0.044)IT(0.183)IT(0.764)PPDR;YFDDEFTAQSIT(0.149)IT(0.85)PPDR 177.67 9.4969e-31 8589200.0 2151.99 2316.79 1944.15 1836.99 2888.2200000000003 2529.93 2513.71 2427.4 2575.7 2501.99 2289.54 True False 2370.4584405886944 2512.034024075213 2076.091710123676 1950.4567001930122 2685.3613910180843 2509.327088875618 2609.3706096048927 2378.983602741538 2467.4522862380277 2344.013924407715 2007.9410945898626 1.1805418231518783 1.2510496601935004 1.0339405452268677 0.9713714737191571 1.3373706022818315 1.249701545347458 1.2995254774333291 1.184787546383408 1.2288469481929816 1.1673718570347293 1.0 10.971501231346386 -10.756547953260814 0.9657033848023108 0.9980050945096358 1.1937382698666261 0.0553224610086146 0.11284159693706972 0.5672533893150297 0.9239844875799932 0.07748389251349229 0.01895721575659865 1.7516690104328042e-11 10.756547953260814 0.1957331753569903 YFDNKDDDS(ph)DTETSNDLPK ddPTM_A549_MK2206_60min_R1 2 YFDNKDDDSDTETSNDLPK 19 1 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 ZNF639 Zinc finger protein 639 1 YFDNKDDDS(0.954)DT(0.045)ETSNDLPK;YFDNKDDDS(0.951)DT(0.037)ET(0.01)S(0.002)NDLPK 127.28 6.177600000000001e-17 16439900.0 3372.9 3712.4 3414.7 4078.1 5203.4 3689.9 3480.9 3051.6 5803.0 5948.4 5072.5 True False 3942.1630605122605 3901.345303057543 3898.9558064590833 5077.234683072867 4437.9867529022995 4080.362768842615 4113.334472500587 3484.1736451330517 4488.629765486799 4604.652308656779 3812.858256121971 1.0339128275179588 1.0232075364442137 1.022580842127785 1.3316085576800023 1.1639527238592242 1.0701585253768968 1.078806028494809 0.9137957435314624 1.1772348888867825 1.2076641719538075 1.0 11.896657184204766 -11.14723263519103 1.5195292537924097 0.9999214213616702 1.1021476442060705 0.0 0.11967247344486387 0.7650111496721721 3.162088860751427 0.0781605255697941 0.01663224738551278 7.1247128386913726e-12 11.14723263519103 0.1022262228444003 YFDNKDDDS(ph)DTETSNDLPK ddPTM_A549_PD325901_60min_R1 2 YFDNKDDDSDTETSNDLPK 19 1 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 ZNF639 Zinc finger protein 639 1 YFDNKDDDS(0.66)DT(0.337)ET(0.004)SNDLPK;YFDNKDDDS(0.973)DT(0.026)ET(0.001)SNDLPK 169.56 1.3721e-34 110927000.0 8987.2 9127.2 9233.2 8766.8 10533.0 9452.900000000001 10226.4 11527.5 10520.0 10007.4 11249.5 True False 9899.573927973037 9896.381175911181 9859.820475742059 9308.305325152614 9793.198416877349 9375.918716499003 10615.571248100798 11297.574969351188 10077.880984285446 9375.531056126432 9865.882816455998 1.0034149109759183 1.003091295530524 0.9993855247597481 0.9434842779225635 0.9926327525948906 0.9503375309567078 1.0759879724492918 1.145115463008254 1.0214880078928001 0.9502982379324764 1.0 13.268232436263515 -7.7478381232196565 24.999898762141914 1.0271638656174022 0.9825287668985165 0.23132944097573427 0.04934188208759943 337.2002653148446 619792.2384818 0.007545755208374725 0.011157106564444094 1.7871535855228653e-08 7.7478381232196565 -0.04463509871888571 YFDS(ph)GDYNMAK ddPTM_A549_MK2206_60min_R1 9 YFDSGDYNMAK 11 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;P56211;H3BMD8;H3BQ52;P56211-2;H3BTD3 A6NMQ3;P56211;P56211-2 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 1 Y(0.001)FDS(0.985)GDY(0.014)NMAK;YFDS(0.997)GDY(0.003)NMAK;YFDS(0.909)GDY(0.091)NMAK;YFDS(0.681)GDY(0.319)NMAK;YFDS(0.998)GDY(0.002)NMAK;YFDS(0.997)GDY(0.003)NMAK;Y(0.001)FDS(0.993)GDY(0.006)NMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK 167.05 1.8077e-14 1895112000.0 76982.4 82277.4 77850.3 73497.4 99903.6 78884.9 78489.90000000001 78890.2 114943.1 111212.3 114459.1 True False 89975.14708102217 86464.96822481068 88890.64316618793 91504.2662994235 85207.91278149886 87232.44775844124 92750.49884027813 90073.12744110478 88908.67137641317 86089.364189703 86035.74655954461 1.0457879506950187 1.004988875931576 1.0331826795350403 1.0635610192107088 0.99037802528426 1.0139093486922717 1.078046074442863 1.0469267838428755 1.0333922227882364 1.0006232017771972 1.0 16.392648582028514 -10.45620850023613 0.9271669709333334 1.00118465852133 1.0337957608939121 0.2287482242412895 0.023942671438595093 0.6663298368192883 1.079676653623292 0.013250899728328418 0.004461706002309633 3.4977720233790484e-11 10.45620850023613 0.032611102372582135 YFDS(ph)GDYNMAK ddPTM_A549_PD325901_60min_R1 10 YFDSGDYNMAK 11 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;P56211;H3BMD8;H3BQ52;P56211-2;H3BTD3 A6NMQ3;P56211;P56211-2 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 1 YFDS(1)GDYNMAK;Y(0.002)FDS(0.97)GDY(0.028)NMAK;Y(0.001)FDS(0.967)GDY(0.033)NMAK;YFDS(0.997)GDY(0.003)NMAK;YFDS(0.863)GDY(0.137)NMAK;YFDS(0.99)GDY(0.01)NMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK 208.87 8.3236e-31 2419251900.0 161966.1 159806.6 166221.9 167663.3 191179.40000000002 178475.8 180394.1 183151.4 185678.40000000002 180450.0 192126.0 True False 178408.77923885945 173274.06302331146 177502.71770748455 178019.4812500184 177751.6184771255 177022.35225826278 187259.0961909388 179498.30164750625 177874.9825620292 169056.35620421031 168495.71998705922 1.0588327065670367 1.0283588392430338 1.05345535020781 1.0565222740594873 1.0549325436324268 1.0506044442663494 1.1113581769633119 1.0652988791720766 1.0556646932971967 1.003327302421653 1.0 17.362352419957492 -10.392405446615355 0.8323425924918926 1.0012432612698428 1.0592972545549115 0.5782206330430222 0.01890657518227506 0.3512425247932803 0.45399473943580254 0.011785694429356801 0.0038511319621300144 4.051301393406818e-11 10.392405446615355 0.05805399328506877 YFDSGDY(ph)NMAK ddPTM_A549_PD325901_60min_R1 2 YFDSGDYNMAK 11 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;P56211;H3BMD8;H3BQ52;P56211-2;H3BTD3 A6NMQ3;P56211;P56211-2 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 1 YFDS(0.334)GDY(0.666)NMAK;YFDS(0.095)GDY(0.905)NMAK 73.931 0.00052719 760674500.0 33749.0 33055.3 35108.4 33625.4 39661.7 37972.6 35853.3 39270.2 37994.1 37638.7 42314.9 True False 37175.17363529935 35840.98613858544 37491.06714795977 35702.36458917581 36875.99901743704 37663.36373537541 37217.716951178576 38486.92505412405 36397.3401050418 35262.186058539264 37110.43555625175 1.0017444710113808 0.965792656468769 1.0102567266054063 0.9620572772598803 0.9936827327596478 1.0148995335364774 1.002890868655104 1.0370917095754864 0.9807845033203924 0.9501959632106467 1.0 15.179537313248776 -5.771122209696393 24.998593068029482 0.9954563272973633 0.9837685588540056 0.028378413650303136 0.024187121052215006 466.1475321816704 1203484.340056627 0.002758155913044704 0.008734966138423016 1.6938610838742506e-06 5.771122209696393 -0.011687768443357727 YFDSGDYNMAK ddPTM_A549_MK2206_60min_R1 4 YFDSGDYNMAK 11 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;P56211;H3BMD8;H3BQ52;P56211-2;H3BTD3 A6NMQ3;P56211;P56211-2 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 0 ;;; 157.24 4.9683999999999995e-24 10292600.0 8663.9 10198.9 9495.1 8751.9 12614.599999999999 9124.2 8776.699999999999 9038.7 14320.7 12691.0 13178.800000000001 False True 10126.154507981906 10717.980446975971 10841.647956748666 10896.115892887723 10759.00905045958 10089.716787846222 10371.312782555056 10319.963404857817 11077.084315458704 9824.094285717707 9906.140243623502 1.0222098879026091 1.0819532313682965 1.0944371561595185 1.099935557635726 1.0860949659364112 1.01853159148851 1.0469580005422376 1.0417744097152966 1.118203865788083 0.9917176664282935 1.0 13.274107330361643 YFDSGDYNMAK ddPTM_A549_PD325901_60min_R1 5 YFDSGDYNMAK 11 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;P56211;H3BMD8;H3BQ52;P56211-2;H3BTD3 A6NMQ3;P56211;P56211-2 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 0 ;;;; 127.42 3.3656999999999995e-07 26324800.0 26642.199999999997 26017.800000000003 25786.8 26793.399999999998 34388.1 31644.800000000003 27709.899999999994 30605.6 29985.3 32874.700000000004 33146.899999999994 False True 29346.89653104896 28210.41131547704 27536.84731662534 28448.367465773583 31972.798488504697 31387.095240600003 28764.415407939086 29995.14729837126 28725.12211768958 30798.985831568607 29070.041435511375 1.0095237255217457 0.9704290025887534 0.947258619417958 0.9786146170064152 1.0998539014618456 1.0797058996365296 0.9894865637446618 1.0318233417352407 0.9881348873001451 1.0594751266486049 1.0 14.827245507396636 -6.55356584198245 24.99966610564524 1.010528168346958 0.9731611777469985 0.19404932494748406 0.041197558313021965 297.0999917721586 242035.68931147642 0.006084835411181648 0.012666682124422748 2.795336903462942e-07 6.55356584198245 -0.037366990599959515 YFEADPPGQVAAS(ph)PDPTT ddPTM_A549_MK2206_60min_R1 3 YFEADPPGQVAASPDPTT 18 0 H0Y8X4;O43598 H0Y8X4 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 1 YFEADPPGQVAAS(0.919)PDPT(0.036)T(0.046);YFEADPPGQVAAS(0.908)PDPT(0.046)T(0.046);YFEADPPGQVAAS(0.967)PDPT(0.017)T(0.016) 113.47 7.3754e-10 15756000.0 4582.76 5509.7 5566.9 4446.75 7260.5 5643.4 5687.3 5736.6 7811.6 7997.5 9029.2 True False 5356.217850275183 5790.120196168556 6356.370128847942 5536.2039496221905 6192.490067926193 6240.580842214262 6720.608792396387 6549.7806176006925 6042.285072561896 6190.8591954950225 6787.000446757317 0.7891877851333086 0.8531191712142807 0.9365507161392452 0.8157070259612653 0.912404546972563 0.9194902654229052 0.990217820835322 0.9650479131366547 0.8902732687234123 0.9121642534225678 1.0 12.72855839275276 -2.0000000000000004 0.1625534020167515 0.9835856292810188 0.34650420137218496 0.480607518858713 0.04631068355169348 38.12248376572262 0.37626216985023625 0.06956029440499002 5.895239641109574 0.00999999999999999 2.0000000000000004 -0.6370814279088338 YFEADPPGQVAAS(ph)PDPTT ddPTM_A549_PD325901_60min_R1 2 YFEADPPGQVAASPDPTT 18 0 H0Y8X4;O43598 H0Y8X4 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 1 YFEADPPGQVAAS(0.968)PDPT(0.016)T(0.016);YFEADPPGQVAAS(0.998)PDPT(0.001)T(0.001) 133.86 1.0853e-12 32985000.0 5373.0 5097.9 5109.4 5244.7 6386.7 5709.5 5707.700000000001 6714.5 5489.1 5356.299999999999 6611.4 True False 5918.4630046064585 5527.517924081607 5456.1546093181605 5568.653207422078 5938.120224918879 5663.003724978694 5924.9096468732805 6580.574030076654 5258.4122158594355 5018.102303888124 5798.239713117668 1.0207344465626014 0.953309659063665 0.9410019039010081 0.9604041024423009 1.024124651398036 0.9766763716524134 1.0218462740457317 1.1349261768514105 0.9068980373410656 0.865452715336243 1.0 12.501399263762883 -5.240574033705736 22.008849905391248 0.9753126822962385 1.0207346804864827 0.030024029694745158 0.066925453741676 2803.1109722136707 2956486.9351367652 0.008679015129114788 0.41189250954772616 5.746798454498025e-06 5.240574033705736 0.045421998190244284 YFGTDAVPDGS(ph)DEEEVAYTG ddPTM_A549_PD325901_60min_R1 2 YFGTDAVPDGSDEEEVAYTG 20 0 Q9NWZ5;Q9NWZ5-4 Q9NWZ5 UCKL1 Uridine-cytidine kinase-like 1 1 YFGTDAVPDGS(0.995)DEEEVAY(0.003)T(0.001)G;YFGTDAVPDGS(0.953)DEEEVAY(0.035)T(0.011)G 69.594 0.0010156 40749000.0 2471.49 2944.5 3082.6000000000004 2835.2 3299.3 3483.3 2984.1 3300.3 3111.8999999999996 3885.1 3372.0 True False 2722.393845385224 3192.6433487236486 3291.8037731796626 3010.3238647936173 3067.5685499670994 3454.9331596844336 3097.6615584621763 3234.4729274647343 2981.1176649237527 3639.7941229646844 2957.265376869161 0.9205781350158725 1.0795931179175 1.1131242393486767 1.0179417404807372 1.037299044570263 1.1682864807155555 1.047475002646415 1.093737800051293 1.0080656569549546 1.2307972600071868 1.0 11.530047997418357 -8.83948230197448 8.10759467381064 1.0036351427373489 1.0632145099355708 0.0 0.09028912131776512 0.31374341024933533 28.802687811880375 0.009747698923636059 0.010363189688439274 1.4471638255699022e-09 8.83948230197448 0.05957936719822188 YFPSRVS(ph)IK ddPTM_A549_PD325901_60min_R1 2 YFPSRVSIK 9 1 S4R3N1;B4DM50;Q9Y3A3-2;Q9Y3A3-3;Q9Y3A3 S4R3N1 HSPE1-MOB4;MOB4 MOB-like protein phocein 1 Y(0.001)FPS(0.007)RVS(0.992)IK;YFPS(0.013)RVS(0.987)IK 50.354 0.007894700000000001 12068000.0 8225.3 10138.7 14879.2 12190.9 18546.1 9213.2 17913.8 23587.0 13915.900000000001 12645.599999999999 11203.0 True False 9060.32640085417 10993.123830770748 15888.99198789815 12943.904205457293 17243.48591657164 9138.170753826722 18595.519461807497 23116.538781356456 13331.063116845806 11847.154657888397 9825.102021668205 0.922161050427018 1.1188813924299816 1.6171834096843665 1.3174320405946836 1.7550439556294672 0.9300840575164991 1.89265408346876 2.3528039434476526 1.356837118581118 1.2058047470408728 1.0 13.262256672734665 -9.85925229941292 1.3525214485255233 1.0687222728212393 1.4821496345354093 0.10504748555405563 0.4091820926071843 0.5333070062657078 1.9620402133362884 0.1167087182316211 0.07681904974005553 1.382762842146093e-10 9.85925229941292 0.41342736171416994 YFPSSCLDLNSPT(ph)SPTPTR ddPTM_A549_PD325901_60min_R1 1 YFPSSCLDLNSPTSPTPTR 19 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 YFPSSCLDLNS(0.024)PT(0.435)S(0.435)PT(0.045)PT(0.061)R 76.15100000000001 0.00045048 2458600.0 1068.1 765.44 1232.6 938.18 1038.7 1270.9 1360.2 1288.2 1252.2 1299.5 1316.4 True False 1176.5327257063377 829.9463151119131 1316.2516482259293 996.1292478386272 965.7452953204687 1260.550211765552 1411.9631553300007 1262.5058404266501 1199.5743886427986 1217.449348225942 1154.4911453471427 1.0190920306734508 0.7188849550356295 1.1401141130711288 0.8628296993469813 0.8365116520924721 1.091866504863074 1.2230177433759695 1.0935604361409186 1.0390503153509245 1.0545332921196797 1.0 10.173041392713262 -7.270174970546066 24.870691007947897 1.0467670401435003 0.9141181168431457 0.3201317969209193 0.11538783936806377 666.8066468636051 1898432.2267371777 0.017008115928382413 0.02743596353054693 5.368154781238817e-08 7.270174970546066 -0.1326489233003546 YFPSSCLDLNSPTS(ph)PTPTR ddPTM_A549_PD325901_60min_R1 1 YFPSSCLDLNSPTSPTPTR 19 0 A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A096LNR9 CDKL5 Cyclin-dependent kinase-like 5 1 YFPSSCLDLNS(0.048)PT(0.03)S(0.882)PT(0.038)PT(0.002)R 103.01 2.0568e-09 2816000.0 1218.2 1050.7 1206.8 1285.5 1233.9 1153.9 1323.1 1412.3 885.1 1754.3 1354.5 True False 1341.870767208558 1139.24617643197 1288.7007050779257 1364.902415417676 1147.2351207239124 1144.5030209743259 1373.4512945281003 1384.130568572084 847.9023250181609 1643.533198609289 1187.9050868829409 1.1296110960595536 0.9590380485879966 1.0848515755239942 1.148999554332388 0.965763286471189 0.9634633554583878 1.1561961554790814 1.165186161635218 0.7137795219339063 1.3835559900849612 1.0 10.214203854678289 -8.752192394555665 24.99988647028814 0.8648403252499683 1.0665879862651275 0.0 0.18374122560719888 156.543701805661 423226.82302694337 0.02095094443884945 0.02359528758300634 1.76932496515811e-09 8.752192394555665 0.20174766101515917 YFPSSLS(ph)PVTPSESLPR ddPTM_A549_MK2206_60min_R1 2 YFPSSLSPVTPSESLPR 17 0 K7EQ21;Q9P0U4;Q9P0U4-2;K7EKZ6 K7EQ21 CXXC1 CXXC-type zinc finger protein 1 1 YFPS(0.007)S(0.048)LS(0.876)PVT(0.062)PS(0.006)ES(0.001)LPR;YFPS(0.001)S(0.012)LS(0.987)PVTPSESLPR 107.98 8.6929e-09 2097100.0 560.39 843.32 750.22 499.07 724.7 887.78 732.76 576.91 801.96 967.44 921.09 True False 654.9701317799125 886.2413858890445 856.6124769735945 621.3421724041035 618.097590004285 981.7242903393296 865.8930070009275 658.688759212777 620.3173404669648 748.894632083739 692.3579322092431 0.9459993181416584 1.280033555853313 1.237239348497434 0.8974291237214028 0.8927428447768325 1.4179432987887466 1.250643585808213 0.9513702791141119 0.8959489183399629 1.0816581962079832 1.0 9.43537425873568 -8.291678820784584 21.762244538568723 0.9495296965013829 1.1342877147846837 0.14963098310127698 0.1647637419626544 161.7720168986834 116420.88881307004 0.026958963291091435 0.03259680173601975 5.108826797437725e-09 8.291678820784584 0.18475801828330085 YFPSSLS(ph)PVTPSESLPR ddPTM_A549_PD325901_60min_R1 2 YFPSSLSPVTPSESLPR 17 0 K7EQ21;Q9P0U4;Q9P0U4-2;K7EKZ6 K7EQ21 CXXC1 CXXC-type zinc finger protein 1 1 YFPS(0.085)S(0.083)LS(0.806)PVT(0.024)PS(0.001)ESLPR;YFPS(0.001)S(0.001)LS(0.99)PVT(0.007)PSESLPR 89.541 6.5401e-06 5516100.0 2213.4 2062.9 2880.6000000000004 2873.8999999999996 2514.6 2515.6 2672.5 2590.3 3047.8 2491.6 2557.4 True False 2438.10273858104 2236.7478227481806 3076.094838454985 3051.414275899538 2337.983170899057 2495.113787644522 2774.203449948114 2538.6344344489603 2919.7115650100013 2334.279950780884 2242.8560126943034 1.0870527241970338 0.9972766018364303 1.3715079439093045 1.360503865887462 1.0424134040109327 1.112471676078388 1.2369066200622985 1.131875795896208 1.3017828823985018 1.0407622859288033 1.0 11.131121289642815 -11.039185606957888 1.3428466206405687 1.0002349019588883 1.1955692922771088 0.20672619526832547 0.11976680113571002 0.5030152392732568 1.6199541363926986 0.08832841141174469 0.019885844947204787 9.137226550487728e-12 11.039185606957888 0.19533439031822053 YFPSSLS(ph)PVTPSESLPRPR ddPTM_A549_MK2206_60min_R1 2 YFPSSLSPVTPSESLPRPR 19 1 K7EQ21;Q9P0U4;Q9P0U4-2;K7EKZ6 K7EQ21 CXXC1 CXXC-type zinc finger protein 1 1 YFPS(0.004)S(0.032)LS(0.963)PVTPSESLPRPR;YFPS(0.001)S(0.006)LS(0.993)PVTPSESLPRPR 148.2 2.0247000000000002e-21 9099300.0 1724.99 1832.3899999999999 1912.82 1954.05 2779.6 2256.2 2008.13 1896.0 3496.4 2922.8 2838.0 True False 2016.126140043597 1925.6508242295056 2184.0866388587774 2432.792337720637 2370.724522113855 2494.9495864556507 2372.981227344251 2164.763806256477 2704.47098260349 2262.53745002724 2133.2462751846547 0.9450976961715685 0.9026856611118753 1.0238323930366278 1.1404179470605444 1.1113224711519274 1.169555346458855 1.1123803448989238 1.0147744456129868 1.2677725089989387 1.0606077115176933 1.0 11.058834813621297 -6.006175723126761 3.091836924258431 1.1226010600478884 0.9244117415354557 0.4988835346190108 0.07117770631282642 0.1912631849886931 3.7221921015460917 0.013597596013369791 0.04598980404539488 9.858805004622273e-07 6.006175723126761 -0.1981893185124327 YFPSSLS(ph)PVTPSESLPRPR ddPTM_A549_PD325901_60min_R1 2 YFPSSLSPVTPSESLPRPR 19 1 K7EQ21;Q9P0U4;Q9P0U4-2;K7EKZ6 K7EQ21 CXXC1 CXXC-type zinc finger protein 1 1 YFPSS(0.004)LS(0.996)PVTPSESLPRPR;YFPS(0.002)S(0.011)LS(0.988)PVTPSESLPRPR 189.51 2.7557e-44 36485000.0 3575.4 3296.7 3671.7 3022.0 3598.8999999999996 3586.2 3396.0 3466.3999999999996 3398.3999999999996 3611.1 3686.3 True False 3938.3719759296364 3574.5244787696574 3920.883641725741 3208.6620765400344 3346.1256795309864 3556.99517620082 3525.236638362505 3397.259932661805 3255.577066254342 3383.094529725817 3232.9084693810178 1.2182132631437255 1.1056683208399174 1.2128037891763899 0.9925001301241214 1.0350202337066616 1.1002461745790943 1.0904226555592702 1.0508370295161047 1.0070118276122009 1.046455401310373 1.0 11.658616946892742 -2.0000000000000004 0.22996039871244478 0.9938031964961017 2.1765377695884256 0.5099470835178911 0.05224132062902948 22.19919224606539 0.2622735376954397 0.027795621706870523 10.031050870148464 0.00999999999999999 2.0000000000000004 1.1827345730923238 YFQISQDEDES(ph)ESED ddPTM_A549_MK2206_60min_R1 3 YFQISQDEDESESED 15 0 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 RPL22L1 60S ribosomal protein L22-like 1 1 YFQISQDEDES(0.9)ES(0.1)ED;YFQISQDEDES(0.5)ES(0.5)ED;YFQISQDEDES(0.892)ES(0.108)ED 132.97 2.0118e-09 83693900.0 15691.599999999999 16524.0 16584.0 15552.3 21521.2 16402.35 15432.0 16614.2 24424.8 22131.3 24144.699999999997 True False 18339.95845721313 17365.001020289525 18935.860571739086 19362.614198169285 18355.459988961255 18138.035790001246 18235.794644956484 18969.313728853573 18892.621798390835 17131.82395914461 18148.904630180023 1.0105270169702365 0.9568071117313088 1.0433610709624 1.066875086553211 1.0113811474020173 0.9994011296879756 1.004787617575111 1.045204331357237 1.0409786256176627 0.9439591153427466 1.0 14.147594857120614 -5.767211514250473 24.999720556512862 1.022971595070867 0.9836670636279179 0.11224783182406084 0.033569387667799204 127.77067533494996 553400.1360832351 0.003555774389666462 0.011513523266415675 1.7091826898566324e-06 5.767211514250473 -0.03930453144294921 YFQISQDEDES(ph)ESED ddPTM_A549_PD325901_60min_R1 5 YFQISQDEDESESED 15 0 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 RPL22L1 60S ribosomal protein L22-like 1 1 YFQISQDEDES(0.945)ES(0.055)ED;YFQISQDEDES(1)ESED;YFQISQDEDES(0.87)ES(0.13)ED;YFQISQDEDES(0.747)ES(0.253)ED;YFQISQDEDES(0.793)ES(0.207)ED 183.89 2.8544999999999997e-33 155175500.0 22712.9 21751.4 20546.600000000002 24416.1 25138.8 26022.1 23585.8 25511.1 23655.7 24767.6 25555.0 True False 25018.69688764675 23584.466814544936 21941.01583274289 25924.227044013616 23373.13741215192 25810.184645199744 24483.37052564498 25002.261097429215 22661.533193912688 23203.769509134938 22411.897006492112 1.1163132188408469 1.0523190789121135 0.978989677954846 1.1567172130277092 1.0428897386678764 1.1516287370820615 1.0924274066828354 1.1155798677009243 1.011138556782956 1.0353326852436204 1.0 14.451977147363847 -8.811627345419485 8.526339139547161 1.005132462490963 1.0864884224564197 0.29746668411277855 0.049121271200672716 0.20795089749914675 32.240661287925676 0.008065648461513964 0.008587868728699134 1.54302390585917e-09 8.811627345419485 0.08135595996545675 YFQISQDEDESES(ph)ED ddPTM_A549_PD325901_60min_R1 1 YFQISQDEDESESED 15 0 C9JYQ9;H0Y8C2;Q6P5R6 C9JYQ9 RPL22L1 60S ribosomal protein L22-like 1 1 YFQISQDEDES(0.034)ES(0.966)ED 159.08 1.3995999999999998e-19 110070000.0 5287.8 5828.2 6111.3 7492.1 6911.7 5038.4 6031.3 6345.0 6012.3 7649.3 6108.3 True False 5824.613563327382 6319.362868069678 6526.049568232297 7954.8700012063555 6426.246036070559 4997.3689408761975 6260.824421953995 6218.443997443789 5759.623939336448 7166.321892562292 5357.017823703999 1.0872865752946241 1.1796419343813729 1.2182243522423069 1.4849437248476662 1.1995939247458514 0.9328639749458347 1.1687145027314987 1.1608033055122775 1.0751548956680668 1.337744642336711 1.0 12.38721438081794 -7.019292213905508 24.384373042690395 1.0520381714329494 1.2495433315390752 0.08418075346950715 0.13886682156015373 412.4935764183635 521371.322368047 0.016411680657516838 0.02872391815844683 9.565502423927397e-08 7.019292213905508 0.19750516010612573 YFQS(ph)PSR ddPTM_A549_MK2206_60min_R1 2 YFQSPSR 7 0 Q16629-4;Q16629;H7BZZ6 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 1 YFQS(1)PSR;YFQS(0.999)PS(0.001)R 125.82 0.005956800000000001 45204000.0 9310.8 12379.2 9365.9 9409.9 14677.0 10252.0 10486.7 10581.8 14946.0 13965.0 14330.9 True False 10882.235412795386 13009.24840416172 10694.125453982822 11715.32592242647 12518.03274250434 11336.859835273173 12391.99764795653 12081.802555403376 11560.75486385761 10810.296800886279 10772.142017281101 1.010220195327695 1.2076751664888714 0.992757562685943 1.0875576931340374 1.1620746108269284 1.052423911334081 1.1503745149364715 1.121578469353752 1.0732085452745967 1.0035419866860247 1.0 13.395017534765 -9.943484698076945 0.8133856263785563 1.0064712751471303 1.0991736561603638 0.25540119130991834 0.061169854059513064 0.5251831906089336 0.7093486521234993 0.023909492045228277 0.011533892662068997 1.1389779118936096e-10 9.943484698076945 0.09270238101323347 YFQS(ph)PSR ddPTM_A549_PD325901_60min_R1 2 YFQSPSR 7 0 Q16629-4;Q16629;H7BZZ6 Q16629-4 SRSF7 Serine/arginine-rich splicing factor 7 1 YFQS(1)PSR;YFQS(0.785)PS(0.215)R 143.04 0.0048265 57298000.0 8885.400000000001 9322.3 8003.8 8267.8 10863.7 9378.7 9196.6 9439.5 10263.8 9544.0 10665.0 True False 9787.439266914238 10107.92293761469 8546.985998759292 8778.483228463834 10100.671189730412 9302.322976698071 9546.58164557262 9251.221767355504 9832.448179325955 8941.390211210768 9353.272611005219 1.046418689368486 1.0806830248614305 0.9137963100426222 0.9385467091095925 1.079907708222445 0.9945527478534947 1.0206675291747564 0.9890892901453936 1.051230792498973 0.9559638196250344 1.0 13.191255521704209 -8.74122021350791 24.898761366334767 1.0241923293490984 1.007304676017076 0.0 0.05418941370413517 919.408190252466 1132202.405998193 0.008809580878402832 0.009983181846246717 1.8145953201371676e-09 8.74122021350791 -0.016887653332022357 YFS(ph)EADKIK ddPTM_A549_PD325901_60min_R1 1 YFSEADKIK 9 1 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 Y(0.01)FS(0.99)EADKIK 41.398999999999994 0.024763999999999998 1065100.0 1197.4 1011.0 817.94 1055.1 1103.9 853.77 968.27 1093.5 1252.4 1396.3 1062.4 True False 1318.9591665207095 1096.2005181048087 873.4503270727866 1120.271130694041 1026.3658722482587 846.8171801865418 1005.1180447076747 1071.6892846658445 1199.765983338317 1308.1373797059516 931.7315351084801 1.415600005818355 1.1765197128131761 0.9374484968688884 1.2023539919829047 1.1015682453301965 0.9088639251519465 1.07876357817024 1.150212528269819 1.2876734747403715 1.4039853009307528 1.0 9.863770512935837 -5.305107970349573 3.9422931371235985 1.1113425291470833 1.432100782610545 0.26995507651475315 0.13889477310482534 0.1951516216039885 5.744122227109513 0.017796098503679858 0.16238794894002817 4.953270317882949e-06 5.305107970349573 0.32075825346346165 YFS(ph)NER ddPTM_A549_MK2206_60min_R1 1 YFSNER 6 0 A0A5H1ZRR2;Q6P9H4 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 YFS(1)NER 70.525 0.050694 15295000.0 1963.9 2497.3 2035.2 2230.3 3238.7 2677.5 1890.3 2833.5 3225.8 2996.1 3239.2 True False 2295.358307254894 2624.401903169274 2323.8219630730455 2776.7236001219735 2762.2915202799463 2960.831272819344 2233.743041560475 3235.1573022298144 2495.161450544084 2319.27892911818 2434.8172426279525 0.942723037716565 1.0778640208481105 0.9544133014948147 1.1404238279194185 1.1344964508705975 1.2160384036149066 0.917417127845516 1.3287064201738759 1.0247838757092917 0.9525474390903074 1.0 11.24959777234984 -4.008087961351934 15.920610475882224 1.0492899571553156 1.0661514876061076 0.0 0.1251901478166997 0.0 0.0 0.015172898697140483 0.0 9.815491214016587e-05 4.008087961351934 0.016861530450791973 YFS(ph)NER ddPTM_A549_PD325901_60min_R1 2 YFSNER 6 0 A0A5H1ZRR2;Q6P9H4 A0A5H1ZRR2 CNKSR3 Connector enhancer of kinase suppressor of ras 3 1 YFS(1)NER;YFS(1)NER 79.71300000000001 0.043282 37368000.0 9894.099999999999 10054.7 10481.7 9847.9 11960.6 10101.0 10101.7 9758.0 10186.7 11189.599999999999 11708.3 True False 10898.541748348543 10902.044855972716 11193.051193582454 10456.182416796366 11120.52871782999 10018.740804975872 10486.125721362345 9563.369034997084 9758.58842420348 10483.086746370911 10268.253325028822 1.061382243247096 1.0617234023043656 1.0900637955921326 1.018301953196798 1.0830010095995344 0.9757005878064224 1.021218058167932 0.9313530483014492 0.9503649856803752 1.0209220998490984 1.0 13.325903173315442 -7.270183486152516 24.676722351641967 0.9759157464015467 1.0618614645016864 0.6191465264795613 0.03080226775968065 243.93975833827938 688420.8968025523 0.0044636661914598235 0.0072027084537543895 5.368049523983154e-08 7.270183486152516 0.08594571810013973 YGAS(ph)LRK ddPTM_A549_PD325901_60min_R1 1 YGASLRK 7 1 G5E9R3;Q6P4E4;E9PEL3;P61513 G5E9R3 RPL37A 60S ribosomal protein L37a 1 YGAS(1)LRK 50.607 0.021656 4457000.0 3530.3 2979.3 2029.5 2134.4 3281.9 2408.5 2146.9 2184.7 2116.7 2122.4 2052.1 True False 3888.6934571304973 3230.3760668542595 2167.2340743749196 2266.2370404258954 3051.3906659403556 2388.88597453563 2228.6014543287583 2141.1244446360042 2027.742460022531 1988.3913017889513 1799.7047093336894 2.160739724112975 1.794947832330923 1.204216482367989 1.2592271546952454 1.6954951832459682 1.3273766313697513 1.238315065116355 1.1897087525145833 1.1267084258357412 1.1048430842441481 1.0 10.813544497146127 -2.0000000000000004 0.28113299416171694 1.0395705837906684 8.7776812496215 0.730546640101728 0.1763460411700772 17.0187325164041 0.21173322474862477 0.0680604593017583 65.8830918740915 0.00999999999999999 2.0000000000000004 7.738110665830831 up YGATDRS(ph)QDDGGENR ddPTM_A549_MK2206_60min_R1 1 YGATDRSQDDGGENR 15 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 Y(0.014)GAT(0.118)DRS(0.868)QDDGGENR 48.70399999999999 0.022131 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YGATDRS(ph)QDDGGENR ddPTM_A549_PD325901_60min_R1 1 YGATDRSQDDGGENR 15 1 P98175-5;P98175-2;P98175;P98175-4;P98175-3 P98175-5 RBM10 RNA-binding protein 10 1 Y(0.003)GAT(0.08)DRS(0.917)QDDGGENR 48.14 0.022914 1282000.0 212.17 182.64 118.09 180.17 250.86 203.7 185.26 341.84 197.63 255.46 275.45 True False 233.70934220870126 198.03171377513567 126.10429753285742 191.2986917042416 233.24045902001816 202.04113473651978 192.31017067816182 335.0217330317078 189.32429837683776 239.3302120029237 241.5713962214148 0.9674545325494269 0.8197647439750178 0.5220166770790826 0.7918929753127923 0.9655135610767392 0.8363619944115274 0.7960800561913295 1.3868435513144948 0.7837198498588408 0.9907224768596489 1.0 7.916305829154004 -6.6665609559476415 5.789151259630221 0.9244690001938063 0.756794634871777 0.176180775382634 0.1842547595891375 0.3195256649924485 16.030660778963643 0.026531213434974263 0.05566160527689285 2.1549591603385747e-07 6.6665609559476415 -0.16767436532202928 YGEHEAS(ph)PDNGQNEFSDIIK ddPTM_A549_PD325901_60min_R1 1 YGEHEASPDNGQNEFSDIIK 20 0 P46939;Q5SYY2 P46939 UTRN Utrophin 1 YGEHEAS(1)PDNGQNEFSDIIK 149.18 1.0066e-21 9266800.0 3014.9 2113.8 2243.5 2533.0 3148.4 2837.9 2897.2 2886.5 2955.0 3604.4 3030.3 True False 3320.970428547926 2291.9373443817453 2395.7574012614587 2689.4576571396137 2927.267245390358 2814.789083302746 3007.4545314086727 2828.9264930845543 2830.8116262893077 3376.817568869246 2657.592310654394 1.2496162090904697 0.8624111889522244 0.901476645479734 1.0119903065483258 1.1014734026941702 1.059150070542477 1.1316463098390475 1.0644697012943913 1.0651790400433017 1.2706303955393943 1.0 11.37590408885887 -6.527930982790917 24.70945703397799 1.0483735386635804 0.9846991879443149 0.017700500299843935 0.11840265621438842 233.81625399391044 1143546.4184223807 0.01329585369023482 0.027751486631557926 2.965302592029889e-07 6.527930982790917 -0.06367435071926553 YGEPGEVFINK ddPTM_A549_MK2206_60min_R1 2 YGEPGEVFINK 11 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 118.26 4.4167e-05 3043200.0 3568.8999999999996 4528.5 4789.9 3746.4 5530.3 4511.7 4507.1 3929.0 6657.799999999999 6063.8 6518.4 False True 4171.243068772333 4758.98130721261 5469.179845186508 4664.268168182287 4716.800195944113 4989.125099375922 5325.981729152633 4485.9477820578595 5149.818930321907 4693.983368508002 4899.701381312065 0.8513259776773044 0.9712798672514666 1.1162271778534278 0.9519494771604362 0.9626709525471174 1.018250850634475 1.0870012914391973 0.9155553436721059 1.0510475087244735 0.9580141733558108 1.0 12.25847810963927 -5.335237333517762 3.752213816043663 1.0174057586560286 0.8449805446390106 0.35418616067327957 0.058506898664247006 0.1528612178584049 3.6268140170545653 0.007155051397385222 0.0618950559301295 4.621284081623848e-06 5.335237333517762 -0.17242521401701794 YGEPGEVFINK ddPTM_A549_PD325901_60min_R1 1 YGEPGEVFINK 11 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 150.85 2.2764e-11 2082400.0 3304.3 3777.7 3569.4 3193.0 4310.6 3921.9 3306.4 3926.3 4115.2 3881.9 4245.8 False True 3639.7501035029077 4096.060036839303 3811.640948545864 3390.2243581708585 4007.8383267626996 3889.961346701802 3432.2268613315055 3847.9868663772377 3942.252454993489 3636.7961715108036 3723.593516343736 0.9774831993683468 1.1000287810312064 1.0236458227289489 0.9104711197101292 1.0763361546235768 1.044679374810338 0.9217512186189623 1.0334068016520894 1.058722558649328 0.9766898979569176 1.0 11.8624798752917 YGFIEGHVVIPR ddPTM_A549_MK2206_60min_R1 1 YGFIEGHVVIPR 12 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;P16070-15;P16070-9;H0YCV9;H0YDW7;H0Y5E4;H0YDX6;H0YD17 P16070 CD44 CD44 antigen 0 59.265 0.011143 1274200.0 640.37 555.12 466.4 537.14 741.4 550.08 780.13 638.52 856.68 569.46 705.33 False True 748.4488004566509 583.3732368907727 532.5425332042394 668.7393241131313 632.3410421266412 608.2891004864481 921.8695228337159 729.032165385489 662.6433478368489 440.81859049285373 530.1770948823083 1.411695842165335 1.1003365526763715 1.0044616003685638 1.2613508402538245 1.1926977763288922 1.1473319129742479 1.7387954548250668 1.375072918884441 1.24985284017965 0.8314553660427543 1.0 9.05033053290801 -10.327628303980775 0.9752761821794044 1.0169216006818704 1.2683821978959857 0.31282205840238375 0.193228175916348 0.6093202926818808 1.1289814247661396 0.08974391667810706 0.035794781677791335 4.702964451295852e-11 10.327628303980775 0.2514605972141153 YGFIEGHVVIPR ddPTM_A549_PD325901_60min_R1 1 YGFIEGHVVIPR 12 0 P16070;P16070-12;H0YD13;P16070-8;P16070-5;P16070-7;P16070-6;P16070-4;P16070-17;P16070-3;P16070-16;P16070-18;P16070-10;P16070-11;P16070-13;P16070-14;H0Y2P0;P16070-15;P16070-9;H0YCV9;H0YDW7;H0Y5E4;H0YDX6;H0YD17 P16070 CD44 CD44 antigen 0 87.184 0.00030215 1314600.0 558.43 616.27 767.15 754.17 755.96 766.56 733.44 840.98 858.38 846.18 746.93 False True 615.1214025055617 668.2052356997531 819.2134122477057 800.7533680556579 702.8639775204216 760.3173895121577 761.351460553768 824.2059941639527 822.305273696858 792.7520503900182 655.0623451793839 0.939027265163769 1.0200635719898845 1.2505884642527731 1.2224078730038705 1.0729726455700146 1.160679430144852 1.1622580143043906 1.2582100012759092 1.2553084141505277 1.2101932834697269 1.0 9.35548841062443 -5.568815641272094 6.569486715977837 1.147480661024179 0.9579616895510189 0.4489981358826258 0.08100440208614638 0.1575606478603653 16.33967678772285 0.014650003114920878 0.05911576399253712 2.698884870411529e-06 5.568815641272094 -0.1895189714731601 YGGDEIPFS(ph)PYR ddPTM_A549_MK2206_60min_R1 2 YGGDEIPFSPYR 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 YGGDEIPFS(1)PYR;YGGDEIPFS(1)PYR 102.33 0.00021256 27834000.0 7727.6 8081.5 6849.5 5742.5 9449.1 7518.9 7090.6 7851.1 10794.2 10612.0 11426.3 True False 9031.829958319115 8492.813831122603 7820.8620951596 7149.412757790622 8059.149907147083 8314.54500735812 8378.870237786963 8964.017467985359 8349.330934795385 8214.741829645915 8588.834360162937 1.0515780814461735 0.9888203072717644 0.910584808974152 0.832407805062734 0.938328714840205 0.9680644262885035 0.9755538279618201 1.0436826572838116 0.9721145599828511 0.9564443188877698 1.0 13.068246632915084 -7.562330557152701 2.68306764323528 0.9909681659177555 0.9393757437615173 0.13522755003206244 0.05388238225441713 0.40450447756779023 5.911032120791092 0.008662753450051018 0.013703732851094719 2.7394882551390494e-08 7.562330557152701 -0.05159242215623816 YGGDEIPFS(ph)PYR ddPTM_A549_PD325901_60min_R1 2 YGGDEIPFSPYR 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 YGGDEIPFS(1)PYR;YGGDEIPFS(1)PYR 135.94 3.3114e-08 47447000.0 5841.1 5793.4 5415.3 4824.2 6518.2 5427.4 5052.8 5722.1 6237.9 5861.2 6835.3 True False 6434.084172009446 6281.630149939069 5782.814822844296 5122.179877446869 6060.384118569249 5383.201053848733 5245.087068998249 5607.968226599391 5975.742755881582 5491.122831721347 5994.601432536705 1.073313087520277 1.0478812012162255 0.9646704435522766 0.8544654611473214 1.010973654674604 0.8980081685882411 0.8749684408590802 0.9355031005332902 0.996854056626223 0.9160113301140184 1.0 12.549448119966652 -3.887788975115907 15.548888536485206 0.9780763847664264 0.9672890978658665 0.0 0.07008068126989274 0.0 0.0 0.009162126045533993 0.0 0.00012948248475769716 3.887788975115907 -0.010787286900559967 YGGDEIPFS(ph)PYRVR ddPTM_A549_MK2206_60min_R1 1 YGGDEIPFSPYRVR 14 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 YGGDEIPFS(0.989)PY(0.011)RVR 48.547 0.0082194 2609000.0 466.93 509.26 405.56 247.26 491.94 220.06 392.26 420.3 703.64 613.55 726.99 True False 545.736368657532 535.1791587746702 463.074506360016 307.8387110999232 419.57627766897735 243.34660313599426 463.52856450431767 479.8788121147667 544.2666634821874 474.94862887101897 546.45831909672 0.9986788554333269 0.9793595230818448 0.847410479769921 0.5633342934714066 0.7678102116965206 0.4453159456667057 0.8482413906160624 0.8781617835153332 0.995989345320691 0.8691397171079681 1.0 9.093967648845357 -8.477647398022508 2.287662089592673 0.998399767697006 0.7670996371698561 0.18507248722418856 0.15737216273802918 0.2828799652147498 2.923282403428685 0.027894002242188576 0.03325703003358607 3.329297479438346e-09 8.477647398022508 -0.23130013052714993 YGGDEIPFS(ph)PYRVR ddPTM_A549_PD325901_60min_R1 1 YGGDEIPFSPYRVR 14 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 YGGDEIPFS(1)PYRVR 73.279 0.00028688 3481200.0 570.42 630.91 642.5 718.38 732.8 803.1 708.39 717.13 670.19 611.31 645.15 True False 628.3286184789905 684.0789998788373 686.1039136663638 762.752701040646 681.3306560227592 796.5598198669562 735.3481690958819 702.8262795723983 642.0242449485048 572.7117822731827 565.8006399428053 1.1105123856744064 1.2090459988662938 1.2126248456271091 1.348094447397143 1.204188556753192 1.4078453851651307 1.2996594863699968 1.2421800718419909 1.134718131484271 1.0122148011905325 1.0 9.144149998254719 -9.256477032611857 1.0480093676606332 1.0324544584568804 1.2603623230388894 0.5915864295173968 0.07817563875200229 0.22278620718444522 0.5128911685326013 0.02060974836341656 0.01712574993703808 5.540168419930833e-10 9.256477032611857 0.22790786458200896 YGGDS(ph)DHPS(ph)DGETSVQPMMTK ddPTM_A549_PD325901_60min_R1 2 YGGDSDHPSDGETSVQPMMTK 21 0 Q8WYQ5;Q8WYQ5-3;Q8WYQ5-2 Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 2 Y(0.004)GGDS(0.992)DHPS(0.938)DGET(0.057)S(0.009)VQPMMTK;Y(0.007)GGDS(0.993)DHPS(0.994)DGET(0.005)S(0.001)VQPMMTK 83.881 2.5225e-05 21205400.0 4611.0 5100.0 5475.200000000001 4859.7 6104.9 5411.2 4570.8 5338.8 5524.0 5456.5 6692.5 True False 5079.105325561209 5529.794898451557 5846.779997052259 5159.872631820519 5676.112884761654 5367.132981277639 4744.744295237731 5232.313445792423 5291.845490227453 5111.975658787885 5869.364927252925 0.8653585845340194 0.942145354223136 0.9961520657719206 0.879119409982832 0.9670744544109102 0.914431637459907 0.8083914280413372 0.8914615994479211 0.9016044420165622 0.8709589064826601 1.0 12.518988695004415 -10.612434173417288 0.9442265323166132 0.9987734398141939 0.9090849675992806 0.0 0.060925059295729715 0.5303048281423554 0.8599366555502606 0.03105371393064639 0.00892359682369179 2.4409890239032757e-11 10.612434173417288 -0.08968847221491327 YGGPNHIVGS(ph)PFK ddPTM_A549_MK2206_60min_R1 3 YGGPNHIVGSPFK 13 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 Y(0.002)GGPNHIVGS(0.998)PFK;YGGPNHIVGS(1)PFK;Y(0.005)GGPNHIVGS(0.995)PFK 67.416 0.0013494000000000002 40366000.0 3819.9 4834.1 5392.6 4553.6 6512.0 5099.2 4420.0 4989.1 7287.6 6725.6 6121.4 True False 4464.605732411509 5080.135041889473 6157.35176791849 5669.232204418874 5554.093426394239 5638.793959424986 5223.05678659329 5696.32020347795 5636.97023590584 5206.282288867941 4601.287437954664 0.9702948995501329 1.1040681788285895 1.3381802052026375 1.2320969469664182 1.2070737812596013 1.22548178862121 1.1351294299742793 1.237983994759963 1.2250854379163827 1.131483820359244 1.0 12.16782186767551 -10.754925540293133 0.9329245648976615 0.996287318967806 1.1926874023098055 0.13766167804936202 0.09687649867941224 0.5053698440455273 0.7575982507409023 0.06830644791428223 0.016177749899261133 1.7582250354687572e-11 10.754925540293133 0.19640008334199954 YGGPNHIVGS(ph)PFK ddPTM_A549_PD325901_60min_R1 4 YGGPNHIVGSPFK 13 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 1 YGGPNHIVGS(1)PFK;YGGPNHIVGS(1)PFK;YGGPNHIVGS(1)PFK;YGGPNHIVGS(1)PFK 77.74600000000001 0.00027425 82085500.0 9344.5 9505.2 10189.3 10702.9 11787.6 12246.1 11621.4 11749.9 13348.899999999998 12970.5 13155.9 True False 10293.146760942685 10306.236562502303 10880.807171238414 11363.993824950485 10959.67964101238 12146.371821781519 12063.658736474097 11515.53902688177 12787.892155050202 12151.540416440626 11537.807702121294 0.8921232721750276 0.8932577859316758 0.9430567272531256 0.9849352769903721 0.9498927286678022 1.0527452125544037 1.045576338931019 0.9980699387774136 1.1083467921465768 1.0531931828094598 1.0 13.494081503208577 -6.519451109834875 0.7602972916907715 1.0491087051950196 0.8809703933341684 0.7431922662907176 0.033433203100795596 0.4070203865332548 0.38139103451685497 0.007538389370792757 0.04058377710012291 3.023770948633583e-07 6.519451109834875 -0.16813831186085126 YGGPNHIVGSPFK ddPTM_A549_MK2206_60min_R1 1 YGGPNHIVGSPFK 13 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 0 46.481 0.039324 1547200.0 1752.5 1899.0 1931.4 1459.7 2166.1 1803.7 1492.4 1958.8 1972.2 2524.6 2404.6 False True 2048.2791554886703 1995.6509887151922 2205.301562244144 1817.3265655284222 1847.4695594153188 1994.5663368008393 1763.5497620615006 2236.465898573413 1525.4998489562404 1954.2911065891517 1807.4714564161452 1.1332290466981971 1.1041120354244318 1.2201031194245338 1.0054524286274582 1.0221293137754341 1.103511941901238 0.975699923670312 1.2373450715553087 0.8439966471066723 1.0812293049784147 1.0 10.819757148982585 -8.774518165986139 24.999797035392984 0.9263317528266453 1.094525259532076 0.2089893520582229 0.09597915043369044 159.79252035114848 305438.655435266 0.01568775888666893 0.01674932775629077 1.680667624048043e-09 8.774518165986139 0.16819350670543076 YGGPNHIVGSPFK ddPTM_A549_PD325901_60min_R1 1 YGGPNHIVGSPFK 13 0 O75369-8;O75369;O75369-9;O75369-2;O75369-3;O75369-6;O75369-7;E7EN95;A0A0A0MT44 O75369-8 FLNB Filamin-B 0 50.563 0.030108 2579700.0 2223.1 2385.0 1797.7 2095.4 2677.7 2262.5 2505.1 2248.6 2895.5 2598.3 2497.2 False True 2448.787475440278 2585.9923201582287 1919.7027324482826 2224.8280990013213 2489.6275895635117 2244.0749501294854 2600.432951343318 2203.749909007425 2773.812204372482 2434.242894571349 2190.0602310550626 1.1181370451444494 1.1807859361531923 0.8765524825422107 1.0158753021735432 1.1367849862120607 1.0246635769685664 1.1873796503261276 1.0062508225838918 1.2665460817194953 1.1114958666678547 1.0 11.096754832045404 -7.742576477448881 24.94961343226173 1.1223857317867914 1.0576544003105175 0.06601548464159734 0.10193740236768258 590.1860798382689 780627.1212790208 0.01875738306158668 0.027796172446210965 1.8089373358764825e-08 7.742576477448881 -0.06473133147627386 YGGPYHIGGS(ph)PFK ddPTM_A549_PD325901_60min_R1 1 YGGPYHIGGSPFK 13 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 YGGPY(0.001)HIGGS(0.999)PFK 61.443999999999996 0.0023279 16097000.0 6029.7 5473.0 6979.6 5898.0 8040.3 7843.9 7072.4 7786.0 8044.3 8122.5 8056.8 True False 6641.830705169469 5934.228917495169 7453.277627744359 6262.30606467013 7475.577065529189 7780.02187903676 7341.544052165779 7630.702122001158 7706.2260458067885 7609.64396380548 7065.864676263181 0.939988382098769 0.8398446884258074 1.054828809951971 0.8862759692677815 1.057984748935595 1.1010714520436111 1.039015660295435 1.0799388994294603 1.0906274601740982 1.0769586331548426 1.0 12.786650404007618 -6.773614113985977 24.99859210153025 1.0516414048722644 0.9326776475171992 0.5655311393747817 0.055609736786390085 139.86028493996264 287177.7104426571 0.008271495403063156 0.015713352944948123 1.6841698409408594e-07 6.773614113985977 -0.11896375735506526 YGGS(ph)PRDPVLTLR ddPTM_A549_MK2206_60min_R1 2 YGGSPRDPVLTLR 13 1 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 YGGS(0.997)PRDPVLT(0.003)LR;YGGS(1)PRDPVLTLR 121.82 2.3388999999999997e-06 30484000.0 2431.5 2884.3999999999996 2722.5 2651.6 4028.2000000000003 2981.2 3045.8 2625.5 4367.8 4367.799999999999 4739.2 True False 2841.8777555324996 3031.2036397314905 3108.591437925689 3301.2421190348473 3435.6571161242723 3296.6686052396 3599.1824345262116 2997.6726652565317 3378.5002739433476 3381.1109464311553 3562.3258447340068 0.7977590707300102 0.8509057766886639 0.872629729400232 0.9267097573106331 0.9644421273823163 0.9254259012024086 1.0103462151972111 0.8414931131827339 0.9483973171453705 0.9491301733190041 1.0 11.79860376996223 -2.3835623500720238 0.25935892240233827 0.9813347407549411 3.1767044244486475e-19 0.5398804151080123 0.044004713724509495 18.780829455769215 0.2755287196252328 0.019137020971890028 7.957562835468073 0.004134639505776399 2.3835623500720238 -0.9813347407549411 YGGS(ph)PRDPVLTLR ddPTM_A549_PD325901_60min_R1 2 YGGSPRDPVLTLR 13 1 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 YGGS(1)PRDPVLTLR;YGGS(1)PRDPVLTLR 136.34 4.9775e-09 61345000.0 4609.0 4418.200000000001 4862.4 4204.6 5311.9 5123.5 4504.2 5304.1 5183.799999999999 5430.5 5348.0 True False 5076.902287033528 4790.537219674246 5192.3917039865 4464.30859266057 4938.810469060174 5081.775914691011 4675.609795792814 5198.305564514047 4965.9429131500865 5087.617303225069 4690.2299037652065 1.082442095846498 1.0213864390375653 1.107065497965925 0.9518315059730287 1.0529996546854585 1.0834811979283747 0.9968828589914844 1.108326387229114 1.0587845404259488 1.0847266354983685 1.0 12.195442926569628 -10.712832282858907 1.037745961784854 1.000799388929927 1.050374641437178 0.0 0.05127032934762897 0.751436725985025 1.4738507029277437 0.026152392209056245 0.007269893333393321 1.9371699215834187e-11 10.712832282858907 0.04957525250725103 YGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTK ddPTM_A549_PD325901_60min_R1 1 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTK 30 0 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 YGGSVGSQPPPVAPEPGPVPS(0.177)S(0.642)PS(0.177)QEPPT(0.005)K 66.173 0.00020269999999999997 3883000.0 623.03 825.74 744.37 787.47 857.34 917.92 796.0 1053.6 769.52 916.14 946.09 True False 686.2795469495557 895.3280077347824 794.8874244604381 836.1102334258715 797.1233960624347 910.444763855406 826.2922155879139 1032.5851214667898 737.1797504778846 858.2947640505693 829.7269277586425 0.8271149507024147 1.079063457845522 0.9580108802876663 1.0076932608231388 0.9607057085826052 1.0972824111118198 0.9958604306358878 1.2444878994781234 0.8884606800326976 1.0344304075668576 1.0 9.696492797572148 -4.358112490770246 16.270233812017207 0.9830301954078036 0.9905811023327094 0.0 0.10817335864503101 0.0 0.0 0.013884367600146734 0.0 4.3841712445141506e-05 4.358112490770246 0.007550906924905787 YGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_A549_MK2206_60min_R1 4 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 31 1 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 YGGSVGSQPPPVAPEPGPVPS(0.115)S(0.718)PS(0.167)QEPPTKR;YGGSVGSQPPPVAPEPGPVPS(0.141)S(0.716)PS(0.135)QEPPT(0.008)KR;YGGSVGSQPPPVAPEPGPVPS(0.135)S(0.684)PS(0.135)QEPPT(0.047)KR;YGGSVGSQPPPVAPEPGPVPS(0.121)S(0.786)PS(0.092)QEPPTKR 168.52 7.1842e-58 158919600.0 4132.34 4255.0599999999995 4379.599999999999 4155.49 5794.33 4584.4 3961.41 4139.53 5508.38 7851.23 6672.739999999999 True False 4829.777965986905 4471.6243791692805 5000.693135551643 5173.585236547034 4941.991732702537 5069.518165121569 4681.146919678402 4726.321054278943 4260.740725075338 6077.631690083954 5015.714499744767 0.962929203054256 0.8915229085301459 0.9970051397076352 1.0314752238809248 0.9853016420599734 1.0107270191274922 0.9332961275839384 0.9423026479117681 0.8494783196476101 1.2117180294837804 1.0 12.292239515273172 -7.870274917253804 7.914787906802851 0.9284246831308512 0.9791201218538065 0.0 0.09716096537708287 0.39080039868522387 26.20949736715704 0.009865013761854358 0.01365497694451056 1.3481092318257067e-08 7.870274917253804 0.05069543872295523 YGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_A549_PD325901_60min_R1 2 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 31 1 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 YGGSVGSQPPPVAPEPGPVPS(0.111)S(0.777)PS(0.111)QEPPTKR;YGGSVGSQPPPVAPEPGPVPS(0.087)S(0.884)PS(0.029)QEPPTKR 209.27 1.3696e-90 239740000.0 3816.6000000000004 3973.8 4274.9 5132.6 5061.299999999999 4545.8 4606.6 5226.4 5436.9 5112.7 5458.8 True False 4204.058422367578 4308.686072052313 4565.020421062002 5449.629045019656 4705.811748537105 4508.7805119551895 4781.9066838282415 5122.155351968517 5208.406000329049 4789.883249461158 4787.4022061842725 0.8781502454372556 0.9000050312226611 0.9535485477207238 1.1383269694741611 0.9829572586272842 0.9418010682559396 0.998852086764523 1.0699237564271948 1.0879399256659346 1.0005182441687646 1.0 12.225027301601722 -6.0140014247777405 5.765122447583336 1.0356763740699566 0.8963980600260179 0.512903354096116 0.05249464503426113 0.09716506664927287 11.751515351788989 0.00791353992906413 0.023062626244672795 9.68274679664422e-07 6.0140014247777405 -0.13927831404393876 YGLETHMETHS(ph)DNPLR ddPTM_A549_PD325901_60min_R1 1 YGLETHMETHSDNPLR 16 0 Q92766;Q92766-2;Q92766-5;Q92766-3;C9JU34;Q92766-6 Q92766 RREB1 Ras-responsive element-binding protein 1 1 YGLETHMET(0.093)HS(0.907)DNPLR 63.443000000000005 0.00082017 5169400.0 2852.6 2883.0 2599.7 3299.5 3093.0 3261.3 2238.3 2859.6 2644.0 3570.4 3428.9 True False 3142.193852026869 3125.960527889378 2776.1312752660624 3503.3026212918085 2875.7583502707353 3234.74105408057 2323.4797313447575 2802.5630346871976 2532.881874757676 3344.964334671725 3007.1670375879776 1.044901667500052 1.0395034558494909 0.923171623180857 1.1649843781547222 0.9563015004904271 1.0756772116906175 0.7726473795111828 0.9319612112186189 0.8422817366305261 1.1123307394838604 1.0 11.554189291452213 -7.720818236602883 24.999998709687794 0.9137920072409293 1.0317082296349847 0.19674524906925606 0.09982357911149613 144.07673763025548 88670.7205650473 0.013143774788526972 0.019495239773606614 1.9018740965428238e-08 7.720818236602883 0.1179162223940553 YGLFKEENPY(ph)AR ddPTM_A549_PD325901_60min_R1 1 YGLFKEENPYAR 12 1 A8MXQ1;P53801 A8MXQ1 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein 1 YGLFKEENPY(1)AR 46.34 0.032619999999999996 4298000.0 3839.0 5067.3 3622.3 4549.8 5149.7 4437.8 3958.9 5148.8 4846.1 4775.0 4863.4 True False 4228.73245387757 5494.339154690894 3868.1310606594075 4830.830812654487 4788.002837500551 4401.660028147899 4109.558105893203 5046.10314484454 4642.435269766707 4473.505685093401 4265.232631632701 0.9914423946106877 1.2881686954054135 0.9068980275476122 1.1326066430297566 1.1225654614922465 1.0319859215892229 0.9635015158176948 1.1830780594288306 1.088436592024669 1.0488304089010438 1.0 12.058408714916132 -10.646684345407532 0.9429766126550196 1.000424517785381 1.0806888721565289 0.03266282743368676 0.10199702459341899 1.142285935759782 1.8270933147013362 0.06067187051894119 0.01670427778231566 2.2558782373785867e-11 10.646684345407532 0.08026435437114787 YGLIYHASLVGQT(ph)SPK ddPTM_A549_PD325901_60min_R1 2 YGLIYHASLVGQTSPK 16 0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 YGLIYHASLVGQT(0.935)S(0.065)PK;YGLIYHASLVGQT(0.933)S(0.067)PK 142.35 2.7018000000000002e-14 11229000.0 7259.0 5821.9 6312.8 6306.5 7000.8 7138.5 5643.5 6879.9 7300.200000000001 6305.8 7247.2 True False 7995.928336206637 6312.531944959824 6741.224569950229 6696.038181899315 6509.08795944887 7080.366422762129 5858.266480741693 6742.674997322856 6993.397981129341 5907.650711845444 6355.840343785939 1.2580442402119494 0.9931860467721696 1.0606346612436666 1.0535252334407652 1.024111306668167 1.1139937505957893 0.9217139141119679 1.0608628651150942 1.1003105180209156 0.9294838121006789 1.0 12.633867169870669 -5.253272419235853 24.81610840910078 1.0425705371125749 1.2580443582542937 0.5287109031897785 0.061202246525093 510.36108268166794 1550742.1704809403 0.007180626670102308 0.11212556392223692 5.581199938378627e-06 5.253272419235853 0.21547382114171887 YGLIYHASLVGQTS(ph)PK ddPTM_A549_MK2206_60min_R1 2 YGLIYHASLVGQTSPK 16 0 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 YGLIYHASLVGQT(0.41)S(0.59)PK;YGLIYHASLVGQT(0.318)S(0.682)PK 113.88 6.0959e-08 7934500.0 3003.6 2964.3 3673.3 2844.6000000000004 4189.7 3093.2 3097.6 2845.5 4369.1 3725.2 5075.2 True False 3510.5342490303988 3115.170208450997 4194.2291749981405 3541.527127698948 3573.4006800620305 3420.520370900018 3660.393824016151 3248.8583389782757 3379.50582601902 2883.6747327362373 3814.8877716057614 0.9202195344144412 0.8165823989993185 1.099437106961788 0.9283437258780091 0.9366987691378181 0.8966241147010869 0.9595023610551509 0.8516261902013351 0.8858729347617268 0.7559002794785865 1.0 11.897424900377361 -10.945661516394717 1.2493783487445274 0.9993283702142339 0.9194140511398808 0.0 0.09942520133190412 0.6730543916515094 1.892583393530507 0.044853526012864395 0.010862067659115595 1.1332832857260187e-11 10.945661516394717 -0.07991431907435309 YGLQDS(ph)DEEEEEHPSK ddPTM_A549_MK2206_60min_R1 2 YGLQDSDEEEEEHPSK 16 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 YGLQDS(1)DEEEEEHPSK;YGLQDS(1)DEEEEEHPSK 160.47 6.1774999999999994e-21 78621000.0 15161.099999999999 17526.7 16754.6 16305.599999999999 22709.0 19058.8 16948.4 20906.5 26498.0 25884.0 28377.0 True False 17719.92302669288 18418.734167411567 19130.65421703205 20300.472731986196 19368.536182430395 21075.589565792467 20027.70489635696 23870.06039847102 20496.245308610945 20036.786422781282 21330.207734642332 0.8307431060745836 0.8635046782736087 0.8968808206195764 0.951724098730471 0.908033171705778 0.9880630244197603 0.9389362328539361 1.1190730392983337 0.9609022829779126 0.9393619917840552 1.0 14.380610395686393 -5.988253281961587 0.6233125597668163 0.990649789486669 0.7972360587836851 0.5607925491074778 0.04850527339639814 0.8906385358414767 0.3860584183128618 0.00810140943963021 0.10314452605598938 1.027416930454326e-06 5.988253281961587 -0.19341373070298395 YGLQDS(ph)DEEEEEHPSK ddPTM_A549_PD325901_60min_R1 2 YGLQDSDEEEEEHPSK 16 0 P52948-2;P52948-5;P52948;P52948-6;A0A3B3ITD8;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 YGLQDS(1)DEEEEEHPSK;YGLQDS(1)DEEEEEHPSK 168.46 2.1227999999999997e-28 126131000.0 25851.0 30992.0 32528.0 34097.0 39944.0 37626.0 31586.0 36159.0 33834.0 37021.0 41296.0 True False 28475.374489499623 33603.80460643344 34735.545686754034 36203.09425009452 37138.47123931918 37319.58633086053 32788.0225145224 35437.780378813244 32412.074640904375 34683.48774195662 36216.85379691246 0.7862464986378025 0.9278499119461949 0.9590989289554271 0.9996200789031786 1.0254471978039488 1.030448048859564 0.9053249820755449 0.9784886499951679 0.8949445145803238 0.9576615333967369 1.0 15.144373602570244 -5.248950216939967 2.5110617370396255 0.9623203119999483 0.7444861786634491 0.6124937155120329 0.042132889870723805 0.34912112543044377 2.655181690317657 0.007113952280920186 0.1636894516005979 5.637022691625732e-06 5.248950216939967 -0.21783413333649915 YGLS(ph)PGPVTESTRPVYLK ddPTM_A549_MK2206_60min_R1 2 YGLSPGPVTESTRPVYLK 18 1 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 Y(0.001)GLS(0.969)PGPVT(0.023)ES(0.004)T(0.004)RPVYLK;YGLS(0.996)PGPVT(0.004)ESTRPVYLK 107.45 1.1525000000000001e-09 12268800.0 4964.3 6306.1 6736.7 5565.4 8254.0 6772.299999999999 5289.1 6059.9 8363.6 8164.7 8480.4 True False 5802.152474517778 6627.053554469131 7692.065358998713 6928.923249840298 7039.847534007683 7488.940290911087 6250.06100678067 6918.909382665417 6469.25795392476 6320.288599369579 6374.4826328667805 0.9102154337360536 1.039622183657713 1.2066964178925654 1.0869781359376252 1.1043794358635926 1.174831076062263 0.9804812981300485 1.0854072057536994 1.014867923644394 0.991498285175682 1.0 12.638092539059237 -8.559688033497704 1.1468974684362374 1.0047559398113028 1.08524405121692 0.1361874175217732 0.07784514679426403 0.5944373435693693 1.5231915815175987 0.015573709994324532 0.017985764364726594 2.7562078575961105e-09 8.559688033497704 0.08048811140561707 YGLS(ph)PGPVTESTRPVYLK ddPTM_A549_PD325901_60min_R1 4 YGLSPGPVTESTRPVYLK 18 1 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 Y(0.004)GLS(0.945)PGPVT(0.039)ES(0.006)T(0.006)RPVYLK;YGLS(0.992)PGPVT(0.006)ES(0.001)T(0.001)RPVYLK;YGLS(1)PGPVTESTRPVYLK;YGLS(0.649)PGPVT(0.283)ES(0.034)T(0.034)RPVYLK 118.46 1.1254e-10 25720900.0 10259.8 11388.099999999999 11618.4 11992.199999999999 13328.7 12475.7 12801.9 13409.3 12536.0 12826.5 14587.1 True False 11301.367343134436 12347.815153540427 12406.894491114825 12732.93095773773 12392.538093518768 12374.102035505153 13289.083309968486 13141.840992107644 12009.155515114298 12016.632601015823 12792.979175245584 0.8834038724148463 0.9652024742941386 0.9698205805823688 0.995306158426018 0.9686983714863173 0.9672572640037624 1.038779406104472 1.0272697869732412 0.9387301699319589 0.9393146378497987 1.0 13.643064651654768 -5.144981114812548 2.047934979351792 0.9800322321003335 0.8339812324989531 0.4684008390646379 0.030262166063276027 0.8133666564809572 2.812842400919935 0.0045873374303959675 0.24438194475959463 7.161745522079463e-06 5.144981114812548 -0.14605099960138046 YGMGTS(ph)VER ddPTM_A549_MK2206_60min_R1 5 YGMGTSVER 9 0 P08559-3;P08559;P08559-2;P08559-4 P08559-3 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial 1 YGMGT(0.008)S(0.992)VER;YGMGT(0.006)S(0.994)VER;YGMGT(0.003)S(0.997)VER;YGMGT(0.002)S(0.998)VER;YGMGT(0.025)S(0.975)VER 122.96 0.00010654 891769000.0 26358.6 29163.7 26295.9 24183.800000000003 35820.100000000006 27707.0 27976.800000000003 26670.5 40748.9 37771.0 40126.8 True False 30807.287274101953 30648.0077617658 30025.0540284849 30108.832085652044 30551.010740599533 30638.93634958189 33059.82242243513 30451.12504998071 31519.33921262192 29238.504866901225 30162.20811665947 1.0213870004128176 1.0161062360960904 0.9954527835745947 0.9982303672595527 1.0128903899355206 1.0158054818492916 1.0960677114410342 1.0095787726218115 1.044994421188045 0.96937547655047 1.0 14.880454428923409 -7.53058483384828 24.99988035319106 1.0271367565455676 1.0085342711086538 0.05026542682311341 0.030106211043709263 358.98777818547893 1164614.1868854258 0.004207349952099596 0.006245014443334592 2.9472377153458182e-08 7.53058483384828 -0.018602485436913785 YGMGTS(ph)VER ddPTM_A549_PD325901_60min_R1 4 YGMGTSVER 9 0 P08559-3;P08559;P08559-2;P08559-4 P08559-3 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial 1 YGMGT(0.027)S(0.973)VER;YGMGT(0.035)S(0.965)VER;YGMGT(0.002)S(0.998)VER;YGMGT(0.002)S(0.998)VER 120.45 0.00013933 1212430000.0 32151.7 35501.1 33945.1 33630.9 39249.4 34376.1 33018.4 36312.1 39086.1 35978.4 37383.8 True False 35415.716915169454 38492.9022881213 36248.81861446863 35708.2043116844 36492.65754707927 34096.15243895964 34274.93328036176 35587.82667920861 37443.44714257409 33706.71768388784 32785.82959543337 1.0802141459340224 1.1740713217603878 1.1056245659105606 1.0891352987651126 1.1130618928173226 1.0399661335307122 1.0454191247652858 1.0854636627576908 1.1420619092032815 1.0280879910564389 1.0 15.000784780071761 -10.958715097084188 1.185446515296823 0.999227322454529 1.10066900428198 0.41702287799054893 0.03741153818114303 0.3497710292090966 0.862860614936926 0.029267747190513945 0.0065842917356769 1.0997270383097792e-11 10.958715097084188 0.10144168182745095 YGPADVEDT(ph)T(ph)GS(ph)GAT(ph)DSK ddPTM_A549_MK2206_60min_R1 1 YGPADVEDTTGSGATDSK 18 0 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 4 YGPADVEDT(0.8)T(0.8)GS(0.8)GAT(0.8)DS(0.8)K 43.628 0.01204 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YGPADVEDT(ph)T(ph)GSGAT(ph)DS(ph)K ddPTM_A549_MK2206_60min_R1 1 YGPADVEDTTGSGATDSK 18 0 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 4 YGPADVEDT(0.69)T(0.69)GS(0.69)GAT(0.965)DS(0.965)K 48.74100000000001 0.0065176 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YGPADVEDTTGSGAT(ph)DSKDDDDIDLFGS(ph)DDEEESEEAKR ddPTM_A549_PD325901_60min_R1 1 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 2 YGPADVEDT(0.053)T(0.053)GS(0.018)GAT(0.831)DS(0.045)KDDDDIDLFGS(1)DDEEESEEAKR 241.39 7.024899999999998e-144 179760000.0 4499.0 4767.2 4805.5 4369.4 6076.5 5153.4 4252.8 6227.7 5930.4 6119.3 6500.1 True False 4955.735168011249 5168.948674489858 5131.6301278190085 4639.2879143726095 5649.707602786972 5111.432419004326 4414.642631221455 6103.483637963861 5681.165911521527 5732.926353673726 5700.628907528833 0.8693313050891979 0.9067330567094476 0.9001866655522258 0.8138203678273974 0.9910674233373427 0.8966435987884857 0.7744132626123106 1.070668471316029 0.9965858159997748 1.0056655935106102 1.0 12.476905374417044 -8.274064045339331 24.999755099235916 1.003763751514448 0.883270695188484 0.5872982866732765 0.05563579400882875 435.3419748705506 862075.9793133463 0.008659515468526384 0.010503994611522863 5.320297951307001e-09 8.274064045339331 -0.12049305632596397 YGPADVEDTTGSGATDSKDDDDIDLFGS(ph)DDEEESEEAK ddPTM_A549_PD325901_60min_R1 1 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAK 38 1 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 YGPADVEDTTGSGATDSKDDDDIDLFGS(0.997)DDEEES(0.003)EEAK 205.55 1.9174999999999995e-98 139980000.0 2713.3 2161.7 2213.0 2212.2 2313.9 2983.9 2975.9 2734.0 2447.7 2993.7 3174.4 True False 2988.752218574113 2343.874045486809 2363.187487850058 2348.8425697292755 2151.379646521647 2959.6001077088927 3089.1495029749653 2679.468225218493 2344.831681106036 2804.6772710919618 2783.968924179557 1.0735580388904329 0.84191817844287 0.848855555579341 0.8437028694282159 0.7727743035621938 1.0630866178152814 1.1096206843922822 0.9624634104018024 0.842262160594003 1.0074384260300275 1.0 11.442927391975788 -7.255226256025937 24.986738996769944 0.9507982315377774 0.8709390872938324 0.19936877342483772 0.09915131486106353 923.7561725898606 3714982.2873121435 0.01625216985438366 0.027700741312798628 5.5561472117035325e-08 7.255226256025937 -0.07985914424394502 YGPADVEDTTGSGATDSKDDDDIDLFGS(ph)DDEEESEEAKR ddPTM_A549_MK2206_60min_R1 2 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR 466.91 0.0 1235520000.0 42757.0 48976.0 45788.0 39668.0 62343.0 44689.0 46027.0 45416.0 66635.0 69340.0 65695.0 True False 49973.33629171416 51468.66920659045 52281.42690899596 49386.66178076421 53172.42728527272 49417.96031784262 54389.51011686184 51853.85708066677 51542.27889422939 53676.045841278494 49381.11841023809 1.0119928000932699 1.0422742712915056 1.0587331472459434 1.0001122568849103 1.076776488607204 1.0007460727660817 1.1014232133224706 1.0500745780985798 1.043764915691809 1.0869750943135776 1.0 15.591671891336585 -10.50132308089469 0.8936369002311265 1.0008713143669434 1.043454907927969 0.0 0.03882605197956708 0.6207212808319736 0.915052553834108 0.01623884886573065 0.005035952030085299 3.1526584211883567e-11 10.50132308089469 0.04258359356102548 YGPADVEDTTGSGATDSKDDDDIDLFGS(ph)DDEEESEEAKR ddPTM_A549_PD325901_60min_R1 4 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.999)DDEEES(0.001)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR 236.2 6.450899999999998e-144 256327000.0 8220.4 9194.1 8900.2 8745.2 10639.400000000001 9368.300000000001 9072.5 9716.1 10334.7 11183.4 10599.7 True False 9054.928956461361 9968.919073696758 9504.221093250382 9285.371142209768 9892.12524793742 9292.007670849962 9417.758952162492 9522.304763366998 9900.368498887341 10477.27821542902 9296.00409703441 0.9740667992336668 1.0723875516445844 1.0223985482410014 0.9988561800625674 1.0641266015677835 0.9995700920371019 1.0130975474899935 1.0243438647369767 1.0650133536457598 1.127073321619066 1.0 13.182394989244667 -8.545734448884355 24.974757008928474 1.0314364222275787 1.0224389258223876 0.0414838544881575 0.04156162794120043 1123.1145971298547 1227239.7298735315 0.005588390605076736 0.006336958096789844 2.8462008965309024e-09 8.545734448884355 -0.008997496405191097 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR ddPTM_A549_MK2206_60min_R1 2 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 0 ; 155.28 6.0483e-52 10141900.0 1399.3600000000001 1391.4699999999998 1376.23 1412.44 2488.7 1469.16 1562.5300000000002 1791.64 2515.0 2202.71 2769.7 False True 1635.5377569327409 1462.2898795510946 1571.400108215418 1758.4878634068405 2122.615526760955 1624.625536050519 1846.4214752840762 2045.6104566673832 1945.3565156297273 1705.1162811514655 2081.9070501687584 0.7855959548242872 0.7023800027155689 0.7547887923661343 0.8446524369396311 1.0195534553710728 0.7803545004176953 0.8868894867974083 0.9825656993195575 0.9344108400382417 0.8190165267048064 1.0 11.023689943475187 -4.815593063522249 0.23220151502377456 1.000116639242649 0.4194971703604682 0.32322023380285847 0.08441436654731484 6.328075662323232 0.2277461388190637 0.04457262020873563 1.0924805081459836 1.528998067393301e-05 4.815593063522249 -0.5806194688821809 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR ddPTM_A549_PD325901_60min_R1 2 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 0 ; 330.95 5.361599999999997e-280 191347000.0 9435.1 10643.099999999999 10785.8 11834.3 13584.8 12441.4 12598.6 12281.400000000001 12014.4 11690.8 13137.3 False True 10392.94440624649 11540.031388962696 11517.78924828431 12565.277833354648 12630.650513015802 12340.081363333018 13078.046617218455 12036.437842428088 11509.476549201443 10952.640892835589 11521.495384206168 0.9020482202764485 1.0016088193536004 0.9996783285677537 1.0905943555364621 1.096268330787172 1.0710485880373637 1.1350997575493569 1.0446940645333078 0.9989568337612494 0.950626678881426 1.0 13.492040357038714 -5.181060686233598 1.8327411940826517 1.0289425274111237 0.8435532760672898 0.35902889513755254 0.052404864525399546 1.0712465553143609 3.0619805177005133 0.008049853407773436 0.36307045387301773 6.590817918723306e-06 5.181060686233598 -0.18538925134383388 YGPSLMPGGNK ddPTM_A549_MK2206_60min_R1 1 YGPSLMPGGNK 11 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 78.934 0.002793 1614400.0 2643.8 3399.9 3687.1 2975.0 3466.4 2638.3 3270.0 3150.0 4700.8 4066.6 4070.4 False True 3090.008805295833 3572.9403878529633 4209.986222507185 3703.8751335528245 2956.497151912312 2917.4831548381976 3864.116672434403 3596.5221464704146 3636.0763056350756 3147.952235623641 3059.607342674987 1.0099363935354744 1.1677774262135132 1.3759890570881006 1.210572050175092 0.9662995348048397 0.9535482263183054 1.2629452866510775 1.175484872292798 1.1884127269926366 1.0288745852176622 1.0 11.579130799957738 -10.823534654533402 1.0417086534991598 0.9989967112471082 1.150605540482612 0.14540305706119416 0.12159824836879914 0.8129642541011504 1.5494286030275104 0.09101805019946592 0.021913338495270593 1.501292605312982e-11 10.823534654533402 0.1516088292355039 YGPSLMPGGNK ddPTM_A549_PD325901_60min_R1 3 YGPSLMPGGNK 11 0 P52209-2;P52209;K7EPF6;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ;; 136.33 6.3062e-10 9333000.0 9858.3 10305.3 11380.3 10493.900000000001 12332.5 12191.6 11177.9 12289.8 12468.1 12177.900000000001 12450.0 False True 10859.107358703111 11173.763797453488 12152.635593303214 11142.084369623917 11466.307744815336 12092.3156517121 11603.281101281586 12044.670297838411 11944.109115985682 11408.985315706579 10918.7289270525 0.9945395138254904 1.0233575603996459 1.1130082699638744 1.0204561761779822 1.0501504178207175 1.1074838227508235 1.0626952256808047 1.103120187185548 1.0939102157205016 1.0449005000425835 1.0 13.41451729831908 -5.530628491962721 24.993854909482284 1.0571193214316383 1.001744003129992 0.2623174030856593 0.035697556324034006 197.99010389514817 638545.9899435904 0.006027050869736899 0.02343405627973135 2.9469414546756434e-06 5.530628491962721 -0.055375318301646326 YGQFSGLNPGGRPIT(ph)PPR ddPTM_A549_MK2206_60min_R1 3 YGQFSGLNPGGRPITPPR 18 1 P62136-3;P62136;P62136-2 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 1 YGQFSGLNPGGRPIT(1)PPR;YGQFSGLNPGGRPIT(1)PPR;YGQFSGLNPGGRPIT(1)PPR 161.68 2.9388e-23 274250200.0 14035.099999999999 14039.900000000001 13445.5 14367.3 19964.4 17379.7 14662.900000000001 16314.0 25080.9 22747.0 20960.9 True False 16403.881754749804 14754.470940738507 15352.274078468272 17887.289144972616 17027.66320668076 19218.80831828884 17326.959130348132 18626.55945952963 19400.116195967254 17608.436901522393 15755.730038589847 1.0411375235912563 0.9364511136330086 0.9743930646733977 1.1352878667736772 1.0807282915469878 1.219798020860793 1.0997242963613834 1.1822085942008642 1.2313054456030514 1.1175894013412764 1.0 13.943588982438854 -6.259632128099089 24.179105757856906 1.1231999733071207 0.9792396090486309 0.4993321039712537 0.06598654954879946 90.62289783841949 1212415.517202901 0.012671063058478475 0.031730254760970585 5.500065631519439e-07 6.259632128099089 -0.1439603642584898 YGQFSGLNPGGRPIT(ph)PPR ddPTM_A549_PD325901_60min_R1 4 YGQFSGLNPGGRPITPPR 18 1 P62136-3;P62136;P62136-2 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 1 YGQFSGLNPGGRPIT(1)PPR;YGQFSGLNPGGRPIT(1)PPR;YGQFSGLNPGGRPIT(1)PPR;YGQFSGLNPGGRPIT(1)PPR 197.92 5.6736e-49 448803500.0 27067.5 26167.899999999998 28720.2 30877.3 34384.6 32666.7 27126.5 29509.2 34698.399999999994 30931.600000000002 33170.5 True False 29815.372673959668 28373.16076925304 30669.32548059254 32784.520693563754 31969.544316430358 32400.67322580988 28158.813801690372 28920.615856480446 33240.14691493633 28978.57349718013 29090.738785124107 1.0249094357550697 0.9753331112980187 1.0542642353337435 1.126974496444501 1.0989595194735433 1.113779662494455 0.9679648911525655 0.9941519900920958 1.1426367394950476 0.9961442956546248 1.0 14.8282723149736 -5.870800608824804 6.323998230322453 1.0659431842172924 1.000765909100853 0.09366639881697636 0.05894517626642151 0.3138289324016314 16.182493063221273 0.009158335637657694 0.02918336654563134 1.346478400797613e-06 5.870800608824804 -0.06517727511643945 YGQSS(ph)PR ddPTM_A549_MK2206_60min_R1 2 YGQSSPR 7 0 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 YGQS(0.116)S(0.884)PR;YGQS(0.071)S(0.929)PR 69.423 0.022028 21364900.0 3159.3 3622.3999999999996 3118.5 2488.2 3551.4 2675.1000000000004 3168.1 2559.1 3925.5 5352.7 4958.700000000001 True False 3692.5126025308746 3806.764687478628 3560.7501925330644 3097.8091116995442 3028.993764511133 2958.1773064123336 3743.7027614493677 2921.8602619150583 3036.380517735385 4143.521352388398 3727.317936842192 0.9906620967405843 1.0213147233433335 0.95531163503314 0.8311094369169989 0.8126470067314183 0.7936476996428484 1.0043958752338302 0.7839042205212248 0.8146287945341809 1.1116629765956634 1.0 11.863922169557195 -6.021836840789021 5.377478110450019 0.8881209415615853 1.003066099930182 0.16019516984592463 0.10030319454787998 0.20468518874502575 18.121172570355526 0.012716250516497076 0.03690250074305185 9.509619915318868e-07 6.021836840789021 0.11494515836859664 YGQSS(ph)PR ddPTM_A549_PD325901_60min_R1 2 YGQSSPR 7 0 A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A0A0A0MRJ3 NAV1 Neuron navigator 1 1 YGQS(0.147)S(0.853)PR;YGQS(0.123)S(0.877)PR 58.981 0.031424 36752000.0 8839.8 8890.9 8276.4 8088.6 9970.7 9099.3 8566.0 8445.3 9153.8 9420.599999999999 10830.099999999999 True False 9737.209988483182 9640.167345616263 8838.086274036255 8588.214451456559 9270.392429047663 9025.198317663304 8891.983817495058 8276.85186629032 8769.097619196978 8825.781708270342 9498.066357660347 1.0251781385618517 1.0149610439225147 0.930514269034159 0.9042066172268867 0.9760294443058863 0.9502142833929911 0.9361888496729154 0.8714249358360087 0.9232508269564317 0.929218787901203 1.0 13.213418120194312 -5.723806647433938 8.772204359629711 0.9493784019215787 1.0205476727698062 0.4328160750242168 0.03445737984207324 0.2715487529174249 56.989121353872434 0.005787754269324533 0.022255031498070045 1.8888320902545721e-06 5.723806647433938 0.07116927084822744 YGRAES(ph)PDLR ddPTM_A549_MK2206_60min_R1 1 YGRAESPDLR 10 1 Q6UN15;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 Y(0.004)GRAES(0.996)PDLR 47.31 0.0093185 6341100.0 1239.7 1288.4 1342.5 1066.3 2131.0 1106.8 1101.9 1087.2 2028.5 2009.3 2623.7 True False 1448.9310522449675 1353.974056798659 1532.8866870212078 1327.5435478680263 1817.53272291863 1223.9208413656202 1302.1009667753733 1241.3139294103603 1569.0479888488678 1555.397734480544 1972.1628795637691 0.734691372228577 0.6865427145135954 0.7772617073901489 0.6731409264541431 0.9215936177242408 0.6205982548643976 0.6602400746247644 0.629417550788164 0.7955975670710992 0.7886761030734889 1.0 10.945562992480852 -9.91454210566389 0.8118509122144028 0.9813443594591673 0.7173364586565567 0.24097105208747893 0.10024851560050489 0.2720367062989131 0.36768899397498406 0.03490982243831134 0.017206491372207082 1.21746895122681e-10 9.91454210566389 -0.2640079008026106 YGRAES(ph)PDLR ddPTM_A549_PD325901_60min_R1 1 YGRAESPDLR 10 1 Q6UN15;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 Y(0.004)GRAES(0.996)PDLR 47.606 0.009153399999999999 11682000.0 2942.8 2967.7 3389.8 3563.9 3531.1 4666.7 3895.8 3767.4 4227.4 3759.0 4577.0 True False 3241.550889625139 3217.7984941440545 3619.8522125233308 3784.034008795844 3283.0877176336867 4628.6959424394545 4044.0568008635596 3692.256251531874 4049.7370791794997 3521.6560984850453 4014.05801599352 0.8075495861568465 0.8016322836698255 0.901793695581996 0.9426953954623541 0.8178974256357602 1.1531213360636507 1.0074734308150288 0.9198313120589025 1.0088885270326988 0.8773306425700477 1.0 11.970845753076937 -6.282007837504645 0.8281431905844593 1.003758950798773 0.7859260612444329 0.3593790584978679 0.08175795108644109 0.516558801206343 0.5387771435746816 0.011217673294367137 0.07460327395185325 5.22386761650201e-07 6.282007837504645 -0.2178328895543401 YGRPPDSHHSR ddPTM_A549_MK2206_60min_R1 1 YGRPPDSHHSR 11 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 57.175 0.049037 6481900.0 316.64 488.27 467.1 240.6 509.96 301.06 371.47 404.48 461.46 547.32 507.86 False True 370.0810908952542 513.1208574302086 533.3418037300604 299.5470108009444 434.9455595399273 332.91796937254594 438.9612906144368 461.8162786680488 356.94004680019606 423.68003186975136 381.7443457770535 0.9694474718202876 1.3441478914002871 1.397117755979922 0.7846796268618107 1.1393634623574604 0.8720966611696112 1.14988288751446 1.2097527672034176 0.9350237947169395 1.1098528021609235 1.0 8.576462978414884 -6.253068229917614 24.992865152789758 0.9940866117394117 1.247628714608701 0.24522481625393555 0.15857190685121117 513.2831969872076 1532451.74382617 0.0202893034620794 0.05273105187242511 5.58382463061842e-07 6.253068229917614 0.25354210286928935 YGRPPDSHHSR ddPTM_A549_PD325901_60min_R1 1 YGRPPDSHHSR 11 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 73.435 0.0053395000000000005 6865800.0 477.88 388.25 333.82 498.62 640.0 566.83 599.64 491.12 528.32 579.7 343.16 False True 526.3940258033379 420.9691900634936 356.47503262273244 529.4186249518177 595.0486078801387 562.2139244118872 622.4596283355987 481.32422632381326 506.11654768228976 543.0976430677795 300.95349547046885 1.7490875956780187 1.3987848501490534 1.184485437078805 1.7591376505669032 1.9772111533375694 1.8681089699024764 2.0682917384379667 1.5993309051665205 1.6817101489088788 1.8045899158565217 1.0 8.2333967630138 -10.493607851420915 0.7680367937869998 0.9893658302731626 1.6994500503098617 0.0 0.33182118527035537 0.4560287397376797 0.4741023499445742 0.18858007092444873 0.051119797680579095 3.209165750413161e-11 10.493607851420915 0.7100842200366991 YGS(ph)FEEAEASYPILNR ddPTM_A549_MK2206_60min_R1 2 YGSFEEAEASYPILNR 16 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 Y(0.047)GS(0.953)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR 114.31 1.9192000000000001e-07 5146500.0 1499.4 2562.3 1840.4699999999998 1578.11 2960.3999999999996 2109.05 1406.6 1933.51 2673.7 2888.9 2505.3 True False 1752.4620631895643 2692.710125531824 2101.4763209399807 1964.7470208440495 2524.9290816181665 2332.228271125916 1662.1610126746884 2207.590963626036 2068.1112190215504 2236.2954835718133 1883.1648672375304 0.9305940726051788 1.4298854935000136 1.1159279559111028 1.0433218328495022 1.3407902438845192 1.2384620761044303 0.8826423228216662 1.1722770544590795 1.0982103877369607 1.1875197559586488 1.0 10.878943595147371 -7.720854753456143 24.9999200591029 1.0478366300051458 1.1921305270486477 0.1207681824068062 0.14900820360644507 182.8529774032888 112636.0984310572 0.020392891802059627 0.030247332554701137 1.901714187678052e-08 7.720854753456143 0.14429389704350193 YGS(ph)FEEAEASYPILNR ddPTM_A549_PD325901_60min_R1 2 YGSFEEAEASYPILNR 16 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 YGS(1)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR 236.17 3.725499999999999e-65 11789700.0 3013.59 3579.0 3026.06 3542.8 3990.22 3402.1000000000004 3378.25 3805.6000000000004 4098.8 3673.9 3944.5 True False 3319.5274383122955 3880.6148905015907 3231.426628777022 3761.630709717418 3709.9607127117015 3374.3944255626598 3506.811152399332 3729.694322564553 3926.541689960953 3441.929327008306 3459.3515062456713 0.9595808440741188 1.1217752470355646 0.9341134091007683 1.0873803089758292 1.0724439843749816 0.975441327506145 1.0137192320780282 1.0781484089809297 1.135051376788914 0.994963744156698 1.0 11.7562858987061 -8.262407335846248 24.33971563023572 1.0666342501453243 1.0263275900397582 0.02523011705382172 0.06400400686658923 131.0995805881019 3296545.191652208 0.010973724106748838 0.013677278309509728 5.465031432331312e-09 8.262407335846248 -0.04030666010556616 YGS(ph)FISR ddPTM_A549_PD325901_60min_R1 2 YGSFISR 7 0 A0A2H2EQP0;Q9Y2W3 A0A2H2EQP0 SLC45A1 Proton-associated sugar transporter A 1 Y(0.023)GS(0.975)FIS(0.001)R;Y(0.002)GS(0.993)FIS(0.004)R 60.019 0.029098000000000002 5286500.0 2590.4 2181.1 2082.7 2136.97 2514.23 2364.2 2173.99 2655.9 2792.8 2642.3 2467.0 True False 2853.3755010483087 2364.908951571115 2224.0445462925077 2268.965783489001 2337.639158422629 2344.946739048012 2256.7223791029755 2602.9259909867565 2675.4283282236133 2475.464727062262 2163.574639601488 1.3188246195998472 1.0930563283024575 1.0279490735305337 1.048711582192942 1.0804522828263519 1.0838298324110194 1.0430527044440883 1.2030673420475078 1.2365777816273555 1.1441549932006145 1.0 11.079201176776397 YGS(ph)IVDDER ddPTM_A549_MK2206_60min_R1 2 YGSIVDDER 9 0 Q13576 Q13576 IQGAP2 Ras GTPase-activating-like protein IQGAP2 1 YGS(1)IVDDER;YGS(1)IVDDER 106.29 0.00053305 31002000.0 1438.6799999999998 954.55 738.6600000000001 842.26 1269.89 796.22 849.3399999999999 653.27 1034.33 1160.74 1113.53 True False 1681.4940116510356 1003.1325177873023 843.4130951471773 1048.6137378104884 1083.0908632131109 880.4754719119397 1003.6540839649645 745.8730230554695 800.0559064856043 898.5280278310593 837.0097691354354 2.0089299714958946 1.1984716962425164 1.0076502404725287 1.2528094372107785 1.294000265172362 1.051929743689134 1.1990948265773045 0.8911162695578776 0.9558501417635764 1.0734976591242984 1.0 9.709100651022265 -2.861825644815742 1.0769624269240325 1.0237158126204418 199.99999999998212 0.7983093617849519 0.13054663671936975 101.78752804755867 0.7489399887280742 0.020754982937188946 49282.70171135098 0.001374593719158996 2.861825644815742 198.97628418736167 up YGS(ph)IVDDER ddPTM_A549_PD325901_60min_R1 2 YGSIVDDER 9 0 Q13576 Q13576 IQGAP2 Ras GTPase-activating-like protein IQGAP2 1 YGS(1)IVDDER;YGS(1)IVDDER 84.65799999999999 0.0013356 12817400.0 578.88 580.22 588.5699999999999 784.78 768.31 463.41 755.46 950.21 1307.76 2159.88 2281.8999999999996 True False 637.6474714510678 629.1171756822673 628.5138995589284 833.2540782353038 714.3465561256086 459.63614260309583 784.2094437035742 931.2573161246755 1252.7993950579034 2023.5048081925722 2001.2407661559116 0.31862606550629813 0.31436356200693866 0.3140621109603973 0.4163687310027479 0.35695183118709045 0.2296755844555321 0.39186161753536775 0.46533996902006125 0.6260113306927814 1.0111251191826491 1.0 10.966679030738131 -9.435955127191388 0.5240114357421498 0.9922007312197182 0.3075971152822796 0.9512642612495958 0.05734415785696496 0.12444905379984704 0.07767395994540592 0.033805530456388067 0.01894661301792705 3.6647543820205285e-10 9.435955127191388 -0.6846036159374386 down YGS(ph)IVDDERLSAEEMDER ddPTM_A549_MK2206_60min_R1 2 YGSIVDDERLSAEEMDER 18 1 Q13576 Q13576 IQGAP2 Ras GTPase-activating-like protein IQGAP2 1 Y(0.003)GS(0.996)IVDDERLS(0.001)AEEMDER;YGS(1)IVDDERLSAEEMDER 82.975 4.7283999999999997e-05 3240400.0 923.74 1157.33 917.93 1066.56 948.05 436.31 415.16999999999996 647.06 1170.16 1126.48 1117.3400000000001 True False 1079.6447287253093 1216.2331536438926 1048.106276809965 1327.867247879697 808.593100874241 482.4800346008617 490.60101495247443 738.7827365381416 905.1206283615436 872.0073856256623 839.8736409847852 1.2854847158429488 1.4481144475707213 1.2479332909900813 1.5810321732715888 0.9627556592038459 0.5744674092106697 0.5841366974884761 0.8796355790757876 1.0776866711762185 1.038260213290179 1.0 9.714028480478898 -6.78018242107361 24.271469558666734 0.9507611815881534 1.3845529048156886 0.6277252387678578 0.1855036148749082 109.93387252942533 142359.7480418365 0.030947190706625726 0.05856454466651436 1.6588899608616905e-07 6.78018242107361 0.43379172322753523 YGS(ph)KNTDQGVYLGLSK ddPTM_A549_MK2206_60min_R1 2 YGSKNTDQGVYLGLSK 16 1 E9PP18;E9PRW9;E9PNU4;Q13190-4;Q13190 E9PP18 STX5 Syntaxin-5 1 YGS(0.705)KNT(0.295)DQGVYLGLSK;YGS(0.856)KNT(0.143)DQGVY(0.001)LGLSK 98.132 9.1738e-07 7179600.0 5283.2 5430.3 5938.9 5171.4 7390.0 5457.3 4622.6 4949.3 7417.4 8143.1 8147.1 True False 6174.874998161342 5706.67907531338 6781.125322570026 6438.393232152965 6302.9407894738015 6034.78786373744 5462.466584096413 5650.8784315955645 5737.370743153847 6303.568054371434 6123.950221478822 1.0083156744977955 0.9318624203211309 1.1073122865672982 1.0513464347850643 1.0292279593271672 0.9854403849612202 0.8919841583521767 0.9227505494371868 0.9368741638413215 1.029330387478107 1.0 12.58024684060274 -7.4195229124896125 4.490054496721781 0.9590659233767871 1.0259298123978358 0.2879318695347465 0.05176691683830593 0.243526529466036 8.17076595033569 0.007907589119402949 0.012740092288584658 3.80607277009141e-08 7.4195229124896125 0.06686388902104867 YGS(ph)KNTDQGVYLGLSK ddPTM_A549_PD325901_60min_R1 2 YGSKNTDQGVYLGLSK 16 1 E9PP18;E9PRW9;E9PNU4;Q13190-4;Q13190 E9PP18 STX5 Syntaxin-5 1 YGS(0.994)KNT(0.006)DQGVYLGLSK;YGS(0.819)KNT(0.181)DQGVYLGLSK 141.1 9.368700000000001e-15 14489000.0 9120.5 9756.599999999999 10217.2 10797.3 12992.8 11544.0 10637.3 11355.5 12871.3 12749.5 14355.0 True False 10046.406445842766 10578.82292279068 10910.600633014736 11464.224698552523 12080.23055072667 11449.989491401 11042.108272453903 11129.00564428259 12330.36402215146 11944.494394156718 12589.426003842475 0.7980035342974697 0.8402943009126762 0.8666479813841126 0.9106233036401721 0.9595537196882217 0.9094925763816634 0.8770938618713587 0.8839962712268102 0.9794222562957242 0.9487719607320529 1.0 13.61992488657082 -2.0000000000004055 0.13361702915415583 1.0369941426491556 0.27126140253821035 0.6028542007637523 0.0369428186129108 27.633115758057443 0.23831165554334932 0.09464557590923552 4.035660447732614 0.009999999999990664 2.0000000000004055 -0.7657327401109453 YGS(ph)LKYK ddPTM_A549_MK2206_60min_R1 2 YGSLKYK 7 1 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 Y(0.181)GS(0.818)LKY(0.001)K;Y(0.004)GS(0.996)LKYK 69.954 0.0060312 110782000.0 13388.5 16978.6 17252.4 16855.6 21295.2 12776.7 13453.6 10131.8 24167.0 23919.0 26426.0 True False 15648.151482602043 17842.738218535953 19699.04974239455 20985.222756676623 18162.704289580855 14128.72191351295 15897.944973780886 11568.01367733618 18693.213086768836 18515.681287533047 19863.69487950306 0.787776472480407 0.8982587744512482 0.9917112532130966 1.056461191333081 0.9143668587218675 0.7112836760341145 0.8003518514667506 0.5823696823531546 0.9410743167454702 0.9321368154239522 1.0 14.277846385523969 -8.981855517456562 24.966074870014545 0.9740035407339313 0.8476130495858558 0.14642052973301967 0.12379797194487883 156.6508416469031 215548.5656162825 0.023668533365710745 0.024009132505521533 1.0426642487355373e-09 8.981855517456562 -0.12639049114807543 YGS(ph)LKYK ddPTM_A549_PD325901_60min_R1 4 YGSLKYK 7 1 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 Y(0.327)GS(0.673)LKYK;YGS(1)LKYK;Y(0.344)GS(0.656)LKYK;Y(0.001)GS(0.999)LKYK 76.827 0.012353 228092900.0 34035.1 38833.0 40614.1 44021.3 42080.700000000004 54563.399999999994 51990.4 54897.1 50271.4 45311.2 51064.9 True False 37490.318296683654 42105.59319442535 43370.41705842345 46740.39572137388 39125.096802534026 54119.05376083762 53968.923122238506 53802.13427455815 48158.66788150262 42450.243099142244 44784.24102707179 0.8371319338430007 0.9401877139990559 0.9684303242340606 1.0436795321175503 0.8736353660405488 1.2084396769864425 1.2050873674428162 1.201363092031304 1.0753485328107049 0.9478834993202484 1.0 15.450703536123322 -5.710895098203732 0.8415128953978451 1.0669249537119003 0.8059217881493081 0.3661503771203386 0.10047001937313621 1.28315276514018 0.9803531293863688 0.01645026356364804 0.2669614310743231 1.945830030985891e-06 5.710895098203732 -0.2610031655625922 YGS(ph)PPQR ddPTM_A549_MK2206_60min_R1 2 YGSPPQR 7 0 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 Y(0.007)GS(0.993)PPQR;Y(0.006)GS(0.994)PPQR 91.069 0.01245 82040000.0 6340.299999999999 6798.799999999999 5385.6 5717.1 7022.9 6772.6 5822.9 7051.700000000001 8562.8 8611.9 7904.5 True False 7410.387634547686 7144.829879977275 6149.359062660273 7117.789756650368 5989.840713179375 7489.272036711969 6880.845557161555 8051.300069925529 6623.339471981798 6666.46580877569 5941.594496898202 1.2472052137547025 1.2025105186338818 1.0349678130795585 1.1979595309585997 1.0081200789293783 1.26048185224046 1.1580806399281687 1.355073974524632 1.114741080940394 1.121999458605919 1.0 12.536634431862213 -9.68433936662314 1.2240703698982587 1.0233688499423585 1.1739792487324954 0.14629689162447412 0.09907784762582593 0.34680773071592774 1.0604590308909392 0.0254630018714841 0.017799684676249358 2.0685243297144965e-10 9.68433936662314 0.15061039879013682 YGS(ph)PPQRDPNWNGER ddPTM_A549_MK2206_60min_R1 4 YGSPPQRDPNWNGER 15 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 YGS(1)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER 208.37 7.4406e-46 341631900.0 13888.5 13708.300000000001 10199.8 9781.310000000001 19856.0 14365.099999999999 13374.5 13940.6 23340.2 20985.3 21918.0 True False 16232.539258775689 14405.993917116619 11646.285013243145 12177.731389099696 16935.20870308415 15885.205347218363 15804.473527667877 15916.72274129697 18053.68196664054 16244.706155076172 16475.155693973644 0.9852738001567597 0.8744071488432796 0.7068998454140968 0.739157287208771 1.0279240462218386 0.964191516140204 0.9592913002606044 0.9661045417081587 1.0958125253556357 0.9860122997816787 1.0 14.008004478643919 -6.7758699639431725 24.991491613761646 1.0262836166803868 0.8213229545888211 0.510573739760614 0.07900297005560153 128.0556126443777 221772.01805136338 0.012445156136882619 0.02359476210048799 1.6754444609797906e-07 6.7758699639431725 -0.20496066209156572 YGS(ph)PPQRDPNWNGER ddPTM_A549_PD325901_60min_R1 4 YGSPPQRDPNWNGER 15 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 YGS(1)PPQRDPNWNGER;Y(0.064)GS(0.936)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER 186.11 6.2646e-34 450606000.0 17075.8 17219.0 15081.099999999999 16517.2 16144.6 18485.7 15230.699999999999 14204.7 20969.800000000003 18421.4 21252.6 True False 18809.322645460426 18670.10556008576 16104.594136021475 17537.4299307171 15010.658991846389 18335.158588114293 15810.312623058842 13921.37611512843 20088.51223044384 17258.269660184214 18638.66493133142 1.0091561125626618 1.0016868498291147 0.864042258142095 0.9409166372875154 0.8053505466807128 0.983716304556399 0.8482534924742307 0.7469084382608718 1.0777870788736184 0.9259391551791474 1.0 14.186010904459671 -8.803754477571202 24.99973514493698 1.0367328212844316 0.9014682229756694 0.18346149835171777 0.08667145629986336 110.12309187854656 65060.16921136627 0.014144944477573633 0.015058498732174576 1.5712508384020332e-09 8.803754477571202 -0.13526459830876214 YGS(ph)RDDLVAGPGFGGAR ddPTM_A549_PD325901_60min_R1 2 YGSRDDLVAGPGFGGAR 17 1 Q9ULC8-2;Q9ULC8;Q9ULC8-3 Q9ULC8-2 ZDHHC8 Probable palmitoyltransferase ZDHHC8 1 Y(0.002)GS(0.998)RDDLVAGPGFGGAR;Y(0.001)GS(0.999)RDDLVAGPGFGGAR 55.126999999999995 0.0032225 8534900.0 2381.6000000000004 1783.54 2252.9 2443.2 2408.0 2277.7 1997.39 2408.0 2369.2 1853.8600000000001 2561.4 True False 2623.3782787587465 1933.8451751341745 2405.79534178825 2594.1109150902116 2238.870387149022 2259.151166369027 2073.401769463747 2359.9705509605433 2269.630763114933 1736.8069632182726 2246.3640380523934 1.1678331002098956 0.8608779086451304 1.0709730484619422 1.154804328749545 0.9966640977257326 1.0056923669093814 0.9230034555135571 1.0505735094506976 1.010357504246156 0.7731636252172605 1.0 11.133376029557708 YGVNPGPIVGT(ph)TR ddPTM_A549_MK2206_60min_R1 1 YGVNPGPIVGTTR 13 0 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 YGVNPGPIVGT(0.94)T(0.06)R 85.837 0.00028523 2828900.0 2576.8 2543.4 2235.5 2407.7 3523.5 2380.9 2149.4 2325.0 4552.1 4007.9 3640.8 True False 3011.700843288563 2672.848196260251 2552.527514961572 2997.586608085761 3005.1978175522263 2632.8452576864893 2539.918157715753 2654.5758700138776 3521.056618209972 3102.512606392562 2736.6888790318135 1.1004907669132062 0.9766722906426439 0.9327065032926233 1.0953333537666319 1.0981145283183984 0.9620550139473428 0.9280989801859851 0.9699954899341771 1.2866119511018923 1.133673845852061 1.0 11.418215715641573 -8.711898062858513 24.999879490579314 1.135345179388622 1.0061126464986654 0.3164307926500525 0.08640375006493879 128.69223387870574 64941.343278773675 0.019756086858503084 0.022401282426821562 1.9413414937420857e-09 8.711898062858513 -0.12923253288995662 YGVNPGPIVGT(ph)TR ddPTM_A549_PD325901_60min_R1 2 YGVNPGPIVGTTR 13 0 P42166;P42167;G5E972;H0YJH7;P42167-2;P42167-3 P42166;P42167 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 YGVNPGPIVGT(0.938)T(0.062)R;YGVNPGPIVGT(0.924)T(0.076)R 102.5 0.00014006 9446100.0 7414.3 7678.5 8183.0 7888.1 8903.900000000001 9350.2 8029.2 8337.4 9113.8 8905.5 9813.5 True False 8166.99427788082 8325.594142698095 8738.347588376431 8375.3300218251 8278.520780787449 9274.055071248935 8334.755599746832 8171.104016436226 8730.778680093224 8343.205210177857 8606.501712901989 0.9489330915530634 0.9673610045551044 1.0153193341351217 0.9731398774103142 0.9618914928439665 1.0775638442441973 0.9684254854968792 0.9494106071212349 1.0144398933895444 0.9694072561062267 1.0 13.07121122878492 -2.6720690762376202 0.5370896774071293 1.0024382113442674 4.703103314827405e-12 0.06617934443005569 0.03525298646224865 65.10818168048552 1.1978690160453516 0.005842613666943609 70.8577333780314 0.002127800584053293 2.6720690762376202 -1.0024382113395642 YGVSGYPTLK ddPTM_A549_PD325901_60min_R1 2 YGVSGYPTLK 10 0 H7BZJ3;P30101 H7BZJ3;P30101 PDIA3 Protein disulfide-isomerase A3 0 ; 105.4 0.00088727 5554800.0 7687.4 8477.4 8078.6 8117.799999999999 10758.0 9898.3 8728.599999999999 9510.4 10331.3 9607.099999999999 10100.8 False True 8467.819188835223 9191.820249437891 8626.862376568228 8619.218069138555 10002.395193085213 9817.691526570907 9060.771649473189 9320.70761123553 9897.111389063526 9000.50606644206 8858.46563424674 0.9559013421126473 1.0376311913320977 0.973855149724447 0.9729922116327621 1.1291340516596973 1.1082835258304562 1.0228375910207672 1.0521808173191716 1.117248945551179 1.016034428315237 1.0 13.1128411173519 -6.731232736829915 24.999920937529225 1.0621363808201683 0.988044679332026 0.4248823780989367 0.04390632711947445 196.56105702548476 162678.95535313725 0.007433082338936172 0.015471606784656006 1.856809131174679e-07 6.731232736829915 -0.07409170148814226 YGVYEDENYEVGS(ph)DDEEIPFK ddPTM_A549_PD325901_60min_R1 2 YGVYEDENYEVGSDDEEIPFK 21 0 O15541 O15541 RNF113A RING finger protein 113A 1 YGVYEDENYEVGS(1)DDEEIPFK;YGVYEDENYEVGS(1)DDEEIPFK 103.85 3.0650000000000003e-10 26741000.0 3942.2 3681.1 3544.4 3678.2 3887.4 3886.8 4376.0 4320.1 4179.799999999999 4076.5 4528.4 True False 4342.409241905746 3991.319215821571 3784.9442982086534 3905.3940602017074 3614.3624348019584 3855.1471894644324 4542.531074639084 4233.932216447112 4004.137541646038 3819.1090943001564 3971.435507892735 1.0934104892993344 1.0050066803022029 0.9530418637509148 0.9833708875393347 0.9100896710065823 0.9707188198833409 1.1438007908252237 1.0660961780778506 1.008234310663817 0.9616444952234906 1.0 11.955444860237606 YGYLS(ph)LPKPMK ddPTM_A549_MK2206_60min_R1 4 YGYLSLPKPMK 11 1 Q9UBT7-3;Q9UBT7-2;Q9UBT7 Q9UBT7-3 CTNNAL1 Alpha-catulin 1 YGYLS(1)LPKPMK;Y(0.001)GY(0.001)LS(0.998)LPKPMK;YGYLS(1)LPKPMK;YGYLS(1)LPKPMK 90.926 8.2994e-05 36241700.0 11092.6 11998.4 11934.8 9357.8 15009.300000000001 11404.4 11502.3 10735.6 16911.0 15501.8 15861.899999999998 True False 12964.759691967834 12609.06731069003 13627.334102242627 11650.4614200876 12801.451852699485 12611.206038371962 13592.119021817203 12257.404176396129 13080.685501317823 11999.932613532326 11922.952463830672 1.0873782925242366 1.0575457168801727 1.142949629597396 0.9771456738949772 1.0736813630293183 1.057725095913044 1.1399960758922838 1.0280510816075168 1.0971012038334662 1.0064564670483407 1.0 13.541453912119305 -10.891947408262313 1.042467920152128 0.9982794136753367 1.0742994519467832 0.26893116739218614 0.044615837296239046 0.5623194344117148 1.0435307828103708 0.032545274293853656 0.007098502427523134 1.2824858783827581e-11 10.891947408262313 0.07602003827144654 YGYLS(ph)LPKPMK ddPTM_A549_PD325901_60min_R1 3 YGYLSLPKPMK 11 1 Q9UBT7-3;Q9UBT7-2;Q9UBT7 Q9UBT7-3 CTNNAL1 Alpha-catulin 1 Y(0.024)GY(0.037)LS(0.939)LPKPMK;YGYLS(1)LPKPMK;YGYLS(1)LPKPMK 88.087 8.5254e-05 49956000.0 10222.8 9696.7 10490.2 11337.099999999999 12545.7 12846.900000000001 11284.1 11394.3 13867.2 12137.7 12513.0 True False 11260.611130372388 10513.874939571606 11202.128054697097 12037.36691857778 11664.533312315398 12742.279105776128 11713.52260039645 11167.031747844572 13284.409808486997 11371.323550567166 10973.980326442403 1.0261191286482747 0.9580730625366488 1.0207898794665196 1.0969007197482474 1.0629263918223975 1.1611355886134507 1.0673905230331133 1.0175917411604067 1.2105370534041773 1.0362077580153248 1.0 13.421799274086656 -6.15961731489594 3.417975240675439 1.095102100906794 0.991277317843792 0.24165138795230723 0.0606482279075093 0.28253842148205693 6.170684075545226 0.011100559532255245 0.0323642415742303 6.924408568330426e-07 6.15961731489594 -0.10382478306300202 YGYS(ph)PR ddPTM_A549_MK2206_60min_R1 1 YGYSPR 6 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 YGY(0.001)S(0.999)PR 65.252 0.05756 20180000.0 6308.3 6144.3 5915.4 6053.0 8075.5 6948.1 5583.7 6050.8 8594.4 8484.3 8851.6 True False 7372.986816872572 6457.018625572802 6754.292669203173 7535.985271729498 6887.604647550167 7683.343330224494 6598.186013416504 6908.519429797833 6647.782122436633 6567.69073739774 6653.503428267967 1.1081360213249187 0.9704689709994914 1.0151482962354832 1.1326341607809554 1.0351846544915873 1.1547815993572899 0.9916859718420761 1.0383280784746287 0.9991401062773896 0.9871026306974391 1.0 12.69989848206588 YGYS(ph)PR ddPTM_A549_PD325901_60min_R1 2 YGYSPR 6 0 Q8IX90;Q8IX90-3 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 YGYS(0.999)PR;YGYS(1)PR 68.081 0.053877 63846000.0 15555.6 15452.5 16725.9 16852.3 18075.1 18762.4 17816.8 18806.5 19759.9 18515.9 19468.2 True False 17134.793060572527 16754.73640555347 17861.02015500737 17893.228296649795 16805.56733170984 18609.6052350539 18494.828073727047 18431.38960408617 18929.46011990324 17346.80291405674 17073.734819087844 1.0035761502759444 0.9813164245014662 1.0461109033413925 1.0479973178830086 0.9842935660990704 1.0899551522991329 1.0832327120982617 1.079517153064865 1.1086888908887562 1.015993460005225 1.0 14.05949105687282 -7.26177266280266 24.99996546344913 1.059943019683411 1.0147393189924432 0.32744896692850034 0.03565758418099671 41.92950629611895 3145201.016683688 0.006837782554960718 0.011368270338472805 5.4730238060118776e-08 7.26177266280266 -0.045203700690967796 YHDEADQS(ph)ALQR ddPTM_A549_MK2206_60min_R1 2 YHDEADQSALQR 12 0 Q12789;Q12789-3;H3BRD0 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 YHDEADQS(1)ALQR;YHDEADQS(1)ALQR 151.22 7.7933e-13 23759000.0 1533.57 1437.13 1432.06 892.4200000000001 1957.94 1517.73 1204.04 1149.4499999999998 1867.47 1853.03 2313.6000000000004 True False 1792.3991238132728 1510.2737785214663 1635.1476417248352 1111.0629400622556 1669.9296196674338 1678.335181212364 1422.798482653798 1312.388057542989 1444.4910267367975 1434.4292360147724 1739.069267888377 1.0306657457006587 0.8684379664504565 0.940242963243364 0.6388836606901444 0.9602433039916263 0.9650766718741698 0.8181379022247899 0.7546496748439034 0.8306115537828669 0.8248258206278889 1.0 10.7640996816245 -10.782566129886913 1.087930870576424 0.9982219244446449 0.8624758926047876 0.0 0.11571915987387661 0.6574859961854159 1.409715297928405 0.06565254142512071 0.01745188843147051 1.649809766168329e-11 10.782566129886913 -0.13574603183985723 YHDEADQS(ph)ALQR ddPTM_A549_PD325901_60min_R1 2 YHDEADQSALQR 12 0 Q12789;Q12789-3;H3BRD0 Q12789 GTF3C1 General transcription factor 3C polypeptide 1 1 YHDEADQS(1)ALQR;YHDEADQS(1)ALQR 121.92 1.4863e-17 15475000.0 818.2 1029.4 1087.4 958.87 997.96 1066.9 970.82 913.93 1162.6 1205.6 1221.8 True False 901.2630616729948 1116.151150679614 1161.1975030673996 1018.0972221482281 927.8667323750993 1058.2115201295676 1007.7650863530879 895.700949185785 1113.739965050406 1129.4782102510171 1071.526345628333 0.8411021020155156 1.0416460176022209 1.083685443484345 0.9501373683455495 0.8659299289846271 0.987573963483877 0.9404949215337713 0.8359112707215373 1.0393957830288525 1.0540834715442313 1.0 10.065451606669157 YHEEFEKS(ph)R ddPTM_A549_MK2206_60min_R1 3 YHEEFEKSR 9 1 C9J9W2;Q14847;Q14847-2;Q14847-3 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 YHEEFEKS(1)R;YHEEFEKS(1)R;YHEEFEKS(1)R 89.54799999999999 0.00045833 11325700.0 3856.4 3821.23 3710.1900000000005 2484.9 4824.26 3573.1099999999997 3658.6000000000004 3905.2300000000005 5831.6 5987.799999999999 5299.459999999999 True False 4507.266040072186 4015.714285207032 4236.3507317089125 3093.700611551399 4114.617744658578 3951.2141285615403 4323.320262314527 4458.80831176529 4510.751911151617 4635.151821292294 3983.457824344631 1.1314958608388765 1.008097603209269 1.063485775051701 0.7766369691790029 1.0329261476078326 0.9919056013130011 1.0853184476795135 1.1193311209461254 1.1323709475683321 1.1636000745294401 1.0 11.959805584839707 -7.756152947997754 24.48378347947258 1.0708172026015943 0.9952177322343497 0.1951538459435881 0.09174325865319738 162.71678458016498 753607.1642404384 0.014321813706788583 0.020887141847008725 1.7532629363608288e-08 7.756152947997754 -0.07559947036724457 YHEEFEKS(ph)R ddPTM_A549_PD325901_60min_R1 1 YHEEFEKSR 9 1 C9J9W2;Q14847;Q14847-2;Q14847-3 C9J9W2 LASP1 LIM and SH3 domain protein 1 1 YHEEFEKS(1)R 51.218 0.0073902 13729000.0 3779.3 3514.4 4137.2 4346.0 4309.1 3847.4 4438.5 3508.1 4108.0 4954.7 4529.4 True False 4162.971753826386 3810.5708217878746 4417.975271004639 4614.442549517867 4006.443681587979 3816.068050001404 4607.409546340394 3438.12819344879 3935.355045954813 4641.859396425608 3972.312514232259 1.0479970392337008 0.9592827372305462 1.1121922696604636 1.1616514393026587 1.0085922664023619 0.9606666233658474 1.1598809332933064 0.8655230879067146 0.9906962334546859 1.1685534256920755 1.0 11.955763413318211 -8.253560608066882 24.954636761763616 0.9857275362065608 1.0551221183872947 0.05273101189084428 0.09244435452842523 800.6391439210512 2535886.800186711 0.01167875371678726 0.014932277732440385 5.577497598129264e-09 8.253560608066882 0.06939458218073391 YHELPT(ph)LEER ddPTM_A549_MK2206_60min_R1 4 YHELPTLEER 10 0 Q92692 Q92692 PVRL2 Nectin-2 1 YHELPT(1)LEER;YHELPT(1)LEER;YHELPT(1)LEER;YHELPT(1)LEER 145.28 4.3356e-08 99907200.0 4153.56 4972.73 4801.95 3512.95 6402.83 4992.82 5147.371 6037.280000000001 7324.5 7524.49 6943.9400000000005 True False 4854.579383207716 5225.820716752869 5482.938716380998 4373.622907702317 5460.982188777616 5521.156898434315 6082.581682050568 6893.08292839457 5665.512444823036 5824.702483014735 5219.568055005538 0.9300730121819565 1.0011979270471116 1.0504583250184638 0.8379281315257565 1.0462517455904352 1.057780421722743 1.1653419627736064 1.320623249999421 1.0854370294855797 1.1159357290933063 1.0 12.349714706268411 -6.981350813224627 24.842010462281536 1.075182026299807 0.962175494162681 0.3474459591497744 0.09623643975574901 291.29535410932 388023.38850437873 0.015527254003203353 0.029340657647496 1.0438766586917387e-07 6.981350813224627 -0.11300653213712608 YHELPT(ph)LEER ddPTM_A549_PD325901_60min_R1 3 YHELPTLEER 10 0 Q92692 Q92692 PVRL2 Nectin-2 1 YHELPT(1)LEER;YHELPT(1)LEER;YHELPT(1)LEER 107.18 1.2207e-06 114720000.0 838.71 842.24 1384.19 836.47 1256.32 969.32 1078.99 1088.93 1246.63 1254.46 1404.95 True False 923.855221774331 913.2185206415367 1478.1294572106522 888.1368521387973 1168.0804172687124 961.4261792970218 1120.0515548959831 1067.210436900941 1194.2384763726027 1175.2531815125174 1232.1500567118414 0.7497911611835357 0.7411585266477878 1.1996342889885019 0.7208025088347683 0.9480017558785757 0.780283354336498 0.9090220373685586 0.8661367429133883 0.9692313609590614 0.9538230957427692 1.0 10.266962249210463 -8.818113712255846 2.9668548106411503 0.9875813909752825 0.8671827849527584 0.1262979747805021 0.12756893716633533 0.3385558149944932 5.804027556109877 0.02149628727755217 0.022942131842723413 1.52014945362774e-09 8.818113712255846 -0.12039860602252417 YHGHS(ph)MSDPGVS(ph)YR ddPTM_A549_MK2206_60min_R1 6 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial 2 YHGHS(0.716)MS(0.287)DPGVS(0.978)Y(0.019)R;YHGHS(0.952)MS(0.049)DPGVS(0.999)YR;YHGHS(0.623)MS(0.377)DPGVS(0.996)Y(0.004)R;YHGHS(0.957)MS(0.047)DPGVS(0.997)YR;YHGHS(0.781)MS(0.219)DPGVS(0.981)Y(0.018)R;YHGHS(0.996)MS(0.004)DPGVS(0.998)Y(0.002)R 105.03 1.5277e-05 248839500.0 10010.36 10022.35 8138.24 7028.07 12890.67 10667.99 10422.73 10024.009999999998 17434.63 16022.5 16087.47 True False 11699.86403819548 10532.444806081998 9292.364805797748 8749.947465502048 10994.469519167296 11796.86962096135 12316.405126997617 11444.944114743146 13485.7141423831 12403.00612189047 12092.50720741539 0.967530044639615 0.8709893345875594 0.768439881524277 0.723584225787055 0.9091968547618683 0.9755520024604369 1.0185154257708382 0.9464492283060089 1.1152124130315477 1.0256769674931163 1.0 13.561825777213262 -7.348422610374292 1.8025683807576778 1.044462634388575 0.8313823287245407 0.5791962115313687 0.07101123156495776 0.18190065712525424 1.155485660455462 0.012418974730326002 0.022451840253136658 4.483089298263203e-08 7.348422610374292 -0.21308030566403435 YHGHS(ph)MSDPGVS(ph)YR ddPTM_A549_PD325901_60min_R1 6 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial 2 YHGHS(0.994)MS(0.006)DPGVS(1)YR;YHGHS(0.98)MS(0.021)DPGVS(0.999)YR;YHGHS(0.918)MS(0.082)DPGVS(0.999)Y(0.001)R;YHGHS(0.924)MS(0.076)DPGVS(1)YR;YHGHS(0.951)MS(0.05)DPGVS(0.979)Y(0.02)R;YHGHS(0.982)MS(0.018)DPGVS(0.996)Y(0.004)R 105.89 5.0236000000000005e-06 388481400.0 14667.71 15673.0 16747.3 17487.5 19708.2 18937.6 16469.300000000003 17210.5 21425.7 21416.1 23936.5 True False 16156.765121402597 16993.818714398287 17883.87248769601 18567.66315800591 18323.964021599 18783.378464341276 17096.048223846763 16867.22307612393 20525.252338878774 20063.883791105516 20992.46224597529 0.7696460249440343 0.8095200322514035 0.8519187638946326 0.8844919162146276 0.8728830285314483 0.8947677620781458 0.8143898521062933 0.8034895039221872 0.9777439205738674 0.9557661009942842 1.0 14.357583772559869 -8.801894115729251 8.080384729003063 0.9897330827368238 0.8410756104718766 0.732048177948941 0.037551601946905336 0.08191983445450668 14.302221442353899 0.006725044940727136 0.007173592152818502 1.5779959501195575e-09 8.801894115729251 -0.1486574722649472 YHGHS(ph)MSDPGVSYR ddPTM_A549_MK2206_60min_R1 7 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial 1 YHGHS(0.977)MS(0.023)DPGVSYR;YHGHS(0.518)MS(0.482)DPGVSYR;YHGHS(0.795)MS(0.205)DPGVSYR;Y(0.001)HGHS(0.96)MS(0.039)DPGVSYR;YHGHS(0.98)MS(0.02)DPGVSYR;YHGHS(0.986)MS(0.014)DPGVSYR;YHGHS(0.996)MS(0.004)DPGVSYR 149.59 6.9105e-14 248070900.0 15142.33 13544.46 12738.05 9281.51 16485.829999999998 14260.25 14061.989999999998 12210.48 22302.21 23314.680000000004 22837.21 True False 17697.985109575326 14233.815160933835 14544.497030622351 11555.480366662816 14060.786245646952 15769.260189812165 16616.871561653163 13941.352933026696 17250.79504431112 18047.87759525152 17166.100482068254 1.0309845924566665 0.8291816289787252 0.847280198890573 0.673156980453056 0.8191019422456999 0.9186279788053652 0.9680050270596506 0.8121444324288946 1.0049338265456 1.0513673512574608 1.0 14.067274727909613 -8.465359950557646 0.8895003108831233 1.0059695883716673 0.8421762278558119 0.33078641787968655 0.09205618040730994 0.4216700720981574 0.6604557649848554 0.020031038602216823 0.024165453439869217 3.424838125479537e-09 8.465359950557646 -0.16379336051585536 YHGHS(ph)MSDPGVSYR ddPTM_A549_PD325901_60min_R1 6 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial 1 YHGHS(0.956)MS(0.044)DPGVSYR;Y(0.001)HGHS(0.962)MS(0.034)DPGVS(0.001)Y(0.001)R;YHGHS(0.995)MS(0.005)DPGVSYR;YHGHS(0.978)MS(0.022)DPGVSYR;YHGHS(0.94)MS(0.06)DPGVSYR;YHGHS(1)MSDPGVSYR 168.41 5.5958e-23 278075400.0 11233.93 13988.23 9481.16 16164.92 19691.78 16951.11 11890.900000000001 12918.010000000002 22271.03 17804.420000000002 20037.16 True False 12374.390303617838 15167.06723379745 10124.608532446659 17163.390395203027 18308.697305753074 16813.06578028261 12343.414706450154 12660.350156567196 21335.05605869305 16680.24588267868 17572.716346022447 0.704181986435965 0.8631031728472922 0.5761550083142579 0.9767067343056459 1.041882025819942 0.9567710221469669 0.7024192767582038 0.7204549317973168 1.2141012031712561 0.9492127201184933 1.0 14.101049596282003 -8.760343072542907 24.999404035402204 1.101103348990667 0.8247353189370137 0.3270095966931088 0.14689999952592325 21.3971690017088 487925.6765325363 0.026428915353019833 0.029149998529930565 1.7364285885891451e-09 8.760343072542907 -0.2763680300536533 YHGHSMS(ph)DPGVSYR ddPTM_A549_MK2206_60min_R1 1 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial 1 YHGHS(0.252)MS(0.748)DPGVSYR 101.39 7.221499999999999e-06 30207000.0 1313.0 1493.6 1093.2 652.86 1227.1 1486.5 1241.5 1084.2 1680.0 2450.8 2520.5 True False 1534.602300232025 1569.6178603185951 1248.2321983252025 812.8107293079996 1046.5952155295413 1643.8004433411588 1467.0644797637035 1237.8886702232458 1299.4826824087245 1897.1625778454768 1894.5902877388726 0.8099916431343683 0.8284735071622685 0.6588401758434664 0.42901662410507807 0.5524124251574287 0.8676284545419988 0.7743439250470315 0.653380669284768 0.6858911347844033 1.001357702572029 1.0 10.88767017857011 -10.717122268987596 0.6218365721703634 1.041949088621072 0.6869967791740854 0.48188143906695124 0.1215522026501615 0.8279042280685618 0.4645761420436827 0.163569712420696 0.027672530069736394 1.918128644781001e-11 10.717122268987596 -0.35495230944698664 YHPDKNKEPGAEEK ddPTM_A549_MK2206_60min_R1 1 YHPDKNKEPGAEEK 14 2 P25685 P25685 DNAJB1 DnaJ homolog subfamily B member 1 0 69.108 0.00087981 1591300.0 846.65 836.88 732.81 494.97 1097.2 627.9 566.22 548.5 1014.5 1144.6 977.22 False True 989.5438213948547 879.4736173965089 836.7334771813872 616.2376722200473 935.803333452051 694.3439612337127 669.0948447296046 626.251554710801 784.7173698236016 886.0340650407753 734.549304100052 1.3471441819786547 1.1972969172900025 1.1391113877733887 0.838933028430329 1.2739830100289447 0.9452652903733973 0.9108916732953136 0.8525657178017012 1.0682977513470169 1.2062281729697069 1.0 9.520715519757617 -5.643520115744819 1.6823162807463161 1.0116759124628716 1.354209579022045 0.38508929103213163 0.1304453243291469 0.3386767547083534 1.503149485528462 0.01593628627578627 0.14753493995947217 2.2723743805100623e-06 5.643520115744819 0.3425336665591734 YHPDKNKEPGAEEK ddPTM_A549_PD325901_60min_R1 2 YHPDKNKEPGAEEK 14 2 P25685 P25685 DNAJB1 DnaJ homolog subfamily B member 1 0 ; 91.03200000000001 1.9727e-05 3707700.0 2190.27 2125.52 2152.5 1902.5 2951.05 2578.22 2023.1599999999999 2063.8199999999997 3213.8 2785.7400000000002 2512.81 False True 2412.6245980084477 2304.6450299130893 2298.581594034006 2020.0131041090062 2743.77842856982 2557.2238311261176 2100.1524609156318 2022.6554910645298 3078.7351622905517 2609.847900982637 2203.750300015005 1.0947812907805483 1.0457831950822183 1.0430317781548821 0.9166252202417181 1.245049599562681 1.16039636210541 0.9529902098714778 0.9178242612381076 1.3970435590046608 1.1842756872068796 1.0 11.105745050613729 -8.739278502904321 24.999778858591004 1.1874928771777316 1.0497774456163922 0.20996507105682238 0.1265051441327037 371.27840173780714 418840.53261378064 0.02816652096233624 0.03192563158090536 1.8227264555649027e-09 8.739278502904321 -0.13771543156133936 YHPDKNPNEGEK ddPTM_A549_PD325901_60min_R1 2 YHPDKNPNEGEK 12 1 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ; 95.094 0.00092699 14523400.0 3698.3 3751.8 3952.7000000000003 3961.6 4512.7 3826.8 4108.1 4079.6 4402.9 4877.1 5207.0 False True 4073.748693455436 4067.9773529432478 4220.95399151601 4206.299034553608 4195.7435199698475 3795.6358095714945 4264.435993538577 3998.229177615713 4217.86142449719 4569.1590736689095 4566.572009892561 0.8920802485169351 0.8908164251282563 0.9243156534862828 0.9211064723038432 0.9187949978409651 0.8311783546496172 0.9338374571342646 0.8755427854754841 0.9236384349923837 1.0005665220587223 1.0 12.156895867866524 -10.056868958408927 0.6650707351881815 0.998915144110534 0.8987993621645984 0.6517562326834723 0.027911465366422604 0.3265156245177619 0.2836287981690652 0.016025960194510358 0.006004805655785133 8.772654823993228e-11 10.056868958408927 -0.10011578194593551 YHPGYFGK ddPTM_A549_PD325901_60min_R1 2 YHPGYFGK 8 0 E9PLL6;P46776 E9PLL6 RPL27A 60S ribosomal protein L27a 0 ; 108.09 0.0019108 16199200.0 5790.8 5642.0 6002.200000000001 5893.299999999999 7118.1 5365.9 6083.200000000001 5807.5 6581.4 6052.0 6745.5 False True 6378.6777530383515 6117.471140600721 6409.545386160696 6257.315756344604 6618.1492121119045 5322.201889458472 6314.699504854771 5691.664856604383 6304.806645435007 5669.87568715922 5915.846263247603 1.0782358886954357 1.0340821698842513 1.0834536769456324 1.0577211573631302 1.118715551015479 0.8996518253901953 1.0674211640834983 0.9621049302724524 1.065748899629768 0.9584217430367514 1.0 12.530368845866446 YHTINGHNAEVR ddPTM_A549_MK2206_60min_R1 5 YHTINGHNAEVR 12 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;; 116.54 2.3457e-05 76472000.0 3614.7999999999997 3422.48 3041.56 7497.6799999999985 2663.75 2482.87 2652.16 3439.93 3377.3399999999997 4413.74 4654.41 False True 4224.889866625078 3596.6696134059885 3472.898943594956 9334.611936583638 2271.9159036482865 2745.6056554042816 3134.023141884902 3927.5506118438016 2612.377882503738 3416.673068524441 3498.591541818957 1.207597347711105 1.0280335873492792 0.9926563024243056 2.668105671955769 0.649380150981298 0.7847745650173299 0.8957956664628213 1.1226090742224295 0.746694162858901 0.9765852994511255 1.0 11.77255852540735 YHTINGHNAEVR ddPTM_A549_PD325901_60min_R1 3 YHTINGHNAEVR 12 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;; 130.16 7.3201e-08 79005000.0 1699.04 1759.89 1437.04 1348.23 1769.5 1640.31 1553.9599999999998 2841.75 1518.4100000000003 2149.65 2657.0299999999997 False True 1871.5252900328599 1908.2021066344912 1534.5661760235203 1431.5071050475099 1645.2164244436037 1626.951859203048 1613.0967981595402 2785.069066940253 1454.5965081130107 2013.9207321384367 2330.2321543009084 0.803149714752063 0.8188892695144231 0.6585464770929249 0.6143195228017851 0.7060311228677488 0.6981930346296972 0.6922472489199191 1.1951895272751483 0.6242281505850233 0.8642575497987804 1.0 11.18625797824299 YHTLS(ph)LGR ddPTM_A549_PD325901_60min_R1 2 YHTLSLGR 8 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 YHT(0.238)LS(0.762)LGR;YHT(0.343)LS(0.657)LGR 94.69200000000001 0.00077733 9720500.0 2901.2 2842.51 2717.5699999999997 3240.58 3348.8599999999997 3082.64 3444.56 2949.0099999999998 3352.95 3004.0200000000004 3566.0899999999997 True False 3195.7276882494425 3082.058293489714 2902.0006422759516 3440.74326670884 3113.647626539816 3057.536001886035 3575.644615735558 2890.1896820964075 3212.0371716977106 2814.3456645307406 3127.48353730704 1.0218207866255198 0.9854754650902366 0.9279027715601523 1.1001635102679186 0.9955760244291685 0.9776345631922225 1.143297661868562 0.9241262656125898 1.0270356768891185 0.899875452886978 1.0 11.610786574901942 -6.218373482661403 24.998118083876733 1.016958482722393 0.9791073024371459 0.026049131223916833 0.06881500509644732 957.4219990186962 555745.2474764673 0.007441370819909241 0.01968790175214601 6.048205201449186e-07 6.218373482661403 -0.03785118028524703 YHTVNGHNCEVR ddPTM_A549_MK2206_60min_R1 3 YHTVNGHNCEVR 12 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;H0YH80;F8VZ49;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ;; 94.538 0.00025699999999999996 32483500.0 867.83 805.57 800.75 1875.74 1341.2399999999998 566.873 820.86 938.5699999999999 1515.97 1230.7199999999998 1343.39 False True 1014.2984875935716 846.570072132331 914.3083907875102 2335.2963842051686 1143.945372729884 626.8591246001564 969.9996366160564 1071.6151717500754 1172.6052155066382 952.699497227838 1009.7891873221679 1.004465585815354 0.8383631779394736 0.905444821816858 2.3126573482115376 1.1328556366933193 0.6207821716357519 0.9605961806625912 1.0612266255215725 1.1612376426967272 0.9434637538101152 1.0 9.97983841907481 -6.9942347955348545 24.99988129143474 1.032111026697102 1.2732569277806267 0.10453559487628972 0.39054006857050017 345.4224213721314 1497850.6699621615 0.056873085326524735 0.10726040567259255 1.0133633761829523e-07 6.9942347955348545 0.24114590108352463 YHTVNGHNCEVR ddPTM_A549_PD325901_60min_R1 4 YHTVNGHNCEVR 12 0 F8W6I7;P09651-2;P09651;P09651-3;F8VTQ5;H0YH80;F8VZ49;A0A2R8Y4L2 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ;;; 83.314 0.0005657 79453900.0 1143.75 1193.78 1205.23 1242.47 1146.53 1006.5 1130.68 3650.74 980.31 1606.5300000000002 1441.76 False True 1259.8626580157527 1294.384030171274 1287.0241554367494 1319.2145500458962 1066.001688113775 998.3033977040111 1173.7086461318372 3577.9231267498717 939.1109798198545 1505.0934216278752 1264.432660069656 0.9963857291904722 1.0236875960638092 1.0178669027466032 1.0433252728328153 0.8430671887699026 0.7895267413046858 0.9282492324005448 2.829666806101614 0.7427133207458593 1.1903310228833865 1.0 10.30427449005351 YIDKT(ph)IR ddPTM_A549_MK2206_60min_R1 1 YIDKTIR 7 1 K7ENY5;K7EML7;Q9UK45 K7ENY5 LSM7 U6 snRNA-associated Sm-like protein LSm7 1 YIDKT(1)IR 53.327 0.017884999999999998 5289700.0 1436.4 1482.7 1712.6 1597.6 1903.7 1782.0 1425.8 1503.9 2313.1 2226.2 2589.7 True False 1678.829203391684 1558.1630968762584 1955.4724321732008 1989.012071718989 1623.6682518161408 1970.5700572041353 1684.8494041458632 1717.0824305005895 1789.1865432616792 1723.299873836952 1946.6060179160306 0.8624391314627603 0.8004511865962348 1.0045548067639605 1.0217846104515576 0.8341021433573826 1.0123106776962294 0.8655317966958743 0.882090374064927 0.9191313120346359 0.8852843656991555 1.0 10.926745204922177 -14.999999999980748 0.22395887261160374 1.4806119955277703 0.9026580208876621 0.0 0.07932563262067835 59.188969159805694 0.7332177551000311 12.46126450587233 0.04626095550159394 1.0000000000443297e-15 14.999999999980748 -0.5779539746401082 YIDKT(ph)IR ddPTM_A549_PD325901_60min_R1 2 YIDKTIR 7 1 K7ENY5;K7EML7;Q9UK45 K7ENY5 LSM7 U6 snRNA-associated Sm-like protein LSm7 1 YIDKT(1)IR;YIDKT(1)IR 72.643 0.0077645 15518500.0 4748.6 4662.8 4551.0 4683.6 5967.1 5858.7 5389.7 5962.700000000001 5064.5 5967.9 6087.200000000001 True False 5230.674376265445 5055.75052009802 4859.858227386179 4972.895334772642 5547.991481377465 5810.988689645793 5594.8079828570035 5843.769270852342 4851.656677273163 5591.085775511818 5338.51298994008 0.9797998780038849 0.9470334772295397 0.9103393091941745 0.931513203048038 1.0392391086866561 1.0885032406207586 1.0480086858269122 1.0946436361332021 0.9088030105790973 1.0473114490959725 1.0 12.382222228673825 -4.748332015340744 15.955268219619725 0.9784148360091707 15.424345939778267 0.0 0.06878741032546339 15713.24827956034 993644.4461181163 0.010006010601827655 21401.77368214407 1.7851223385043118e-05 4.748332015340744 14.445931103769096 YIDLEPDTPLS(ph)PEELKEK ddPTM_A549_MK2206_60min_R1 4 YIDLEPDTPLSPEELKEK 18 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 YIDLEPDT(0.001)PLS(0.999)PEELKEK;YIDLEPDT(0.009)PLS(0.991)PEELKEK;YIDLEPDT(0.001)PLS(0.999)PEELKEK;YIDLEPDT(0.008)PLS(0.992)PEELKEK 103.89 1.7130999999999998e-09 8342400.0 4571.35 5595.1 4809.7699999999995 3707.79 6603.5 4992.2699999999995 4589.1900000000005 5245.48 7110.4 6154.0 6602.700000000001 True False 5342.882121222902 5879.866691395667 5491.867709969459 4616.198716449017 5632.133897603558 5520.548697799373 5422.986419562459 5989.042853608769 5499.905752975592 4763.807125861379 4963.0673647504245 1.0765282291290392 1.1847243366384057 1.1065470819466956 0.9301100261574125 1.1348090774679176 1.1123259653915623 1.0926683079255688 1.206722055828863 1.1081666535574342 0.9598513934539219 1.0 12.277016321431272 -10.516874110989626 0.9635688676901617 1.003533770619309 1.1054307415090694 0.3185043033958338 0.06859707112260646 0.5851427711113142 1.0193287402232218 0.03765170888942796 0.012294618867952913 3.04176661526822e-11 10.516874110989626 0.10189697088976035 YIDLEPDTPLS(ph)PEELKEK ddPTM_A549_PD325901_60min_R1 2 YIDLEPDTPLSPEELKEK 18 1 Q5VTI5;Q9Y2H5;A0A1B0GUN5 Q5VTI5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 YIDLEPDT(0.001)PLS(0.999)PEELKEK;YIDLEPDT(0.095)PLS(0.905)PEELKEK 114.88 1.5869999999999998e-10 27762000.0 2179.77 1635.16 1468.0 1666.65 2006.22 1739.1399999999999 2124.1800000000003 2403.75 2004.67 2338.2 2373.8 True False 2401.058645738137 1772.96067179452 1567.6273078011243 1769.59518526322 1865.3100282832686 1724.9770204500285 2205.0168322958957 2355.805320544604 1920.420691327712 2190.5656529602916 2081.837648758012 1.1533361629666783 0.8516325338108076 0.7530017092045306 0.8500159396766263 0.8959920719063179 0.8285838338446417 1.0591684868468827 1.1315989611149726 0.9224641952620086 1.0522269372288202 1.0 11.023641849714227 -7.753338102459188 24.998413753129213 0.9842785653095989 0.8794695028646504 0.2523401331007339 0.10933634338910025 246.66060375659882 761127.4096168984 0.016722224717510704 0.02456462300499459 1.764663478182107e-08 7.753338102459188 -0.10480906244494848 YIDQEELNK ddPTM_A549_MK2206_60min_R1 2 YIDQEELNK 9 0 P08238;Q58FF8;P07900;P07900-2;Q14568 P08238;P07900 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ; 193.38 1.208e-11 43905000.0 16319.599999999999 18243.2 17394.4 15464.2 21525.0 17495.5 17294.1 15762.8 24631.0 23087.9 23370.0 False True 19073.94950408726 19171.70095699263 19861.187477632564 19252.929694214312 18358.701013995083 19346.862197427006 20436.214111543664 17997.225171550424 19052.117827624574 17872.327354757064 17566.584020812305 1.085808685484274 1.0913733105012697 1.1306232022174425 1.0959973590428327 1.0450922610932385 1.101344585521322 1.1633573202013276 1.0245147918472886 1.0845658897058335 1.017404825752265 1.0 14.100546053230932 -10.794658142493507 0.3947269874402109 0.9682145470864284 1.0990799985973796 0.4683567265108417 0.03467474768052527 1.551184244056358 0.2938942523377493 0.08509130714263645 0.010689134259077186 1.604507891743647e-11 10.794658142493507 0.1308654515109512 YIDQEELNK ddPTM_A549_PD325901_60min_R1 2 YIDQEELNK 9 0 P08238;Q58FF8;P07900;P07900-2;Q14568 P08238;P07900 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ; 213.98 7.929300000000001e-23 72518000.0 28142.5 26572.6 27107.7 26706.7 33043.0 28860.8 32639.3 29754.3 32167.0 30138.3 34149.0 False True 30999.505882586473 28811.966258547793 28947.391533842314 28356.312203683592 30722.17367216161 28625.767213567746 33881.4064224103 29160.827144703206 30815.132853755716 28235.362594565526 29948.88948834667 1.035080312231564 0.9620378835668928 0.9665597632628733 0.9468234945645393 1.025820128793618 0.955820656545754 1.1313076044303345 0.9736864252028408 1.0289240562908386 0.9427849605425974 1.0 14.870214888094115 -6.77943461089818 24.992163047012518 1.016179851165282 0.9757215655251326 0.06268334288861344 0.051554926454295234 331.7786137240512 460780.71395197033 0.006218589997450572 0.011768776254387941 1.6617488584391737e-07 6.77943461089818 -0.040458285640149416 YIDQEELNKT(ph)KPIWTR ddPTM_A549_MK2206_60min_R1 2 YIDQEELNKTKPIWTR 16 2 P08238;Q58FF8;P07900;P07900-2;Q14568 P08238;P07900 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 1 YIDQEELNKT(0.94)KPIWT(0.06)R;YIDQEELNKT(0.955)KPIWT(0.045)R 54.672 0.0046841999999999995 15130100.0 4134.9 4488.700000000001 4136.3 4142.1 6271.0 4678.4 4330.200000000001 4847.6 7110.0 6454.6 6344.1 True False 4832.7700314009135 4717.155657212157 4722.889537076967 5156.914685945934 5348.544207143467 5173.465182729419 5116.941288983323 5534.762145152373 5499.596352336922 4996.501377085615 4768.684881747341 1.013438747001058 0.9891942483487601 0.9903966511090593 1.0814123419403503 1.1215973250016165 1.084883004647973 1.073029863761594 1.1606474913738325 1.1532731746203704 1.047773442990596 1.0 12.219375736180083 -6.266582839809346 19.356835590495255 1.0850676250813076 0.9968282797386663 0.47009552905697805 0.04354719966401826 18.093928309930938 68102.5730691102 0.008593343272513812 0.020674413746245054 5.412739923431923e-07 6.266582839809346 -0.08823934534264133 YIDQEELNKT(ph)KPIWTR ddPTM_A549_PD325901_60min_R1 2 YIDQEELNKTKPIWTR 16 2 P08238;Q58FF8;P07900;P07900-2;Q14568 P08238;P07900 HSP90AB1;HSP90AB2P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 1 YIDQEELNKT(0.999)KPIWT(0.001)R;YIDQEELNKT(1)KPIWTR 86.557 8.2326e-06 21916000.0 7580.5 6956.5 7104.2 7808.900000000001 8325.6 8736.4 7609.200000000001 7818.6 9564.8 8798.2 10119.9 True False 8350.066779530844 7542.748668838874 7586.333733025027 8291.238017701358 7740.838577760757 8665.253654944185 7898.772269914006 7662.6518894269575 9162.824718487976 8242.680150489796 8875.216455331618 0.9408296486689853 0.8498664462777932 0.854777319652602 0.934201217449807 0.8721858916590812 0.9763427966580689 0.8899808032477865 0.8633763388186172 1.0324057745074582 0.9287300419065455 1.0 13.115566590107662 -8.766460623304365 24.999967752125567 1.0153027337118856 0.8974011929518139 0.3907906688344762 0.046140586936004514 51.938862959209764 258594.61932751926 0.006498830637033435 0.007023131653759559 1.7121404063413026e-09 8.766460623304365 -0.11790154076007175 YIEIDS(ph)DEEPR ddPTM_A549_MK2206_60min_R1 2 YIEIDSDEEPR 11 0 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(1)DEEPR;YIEIDS(1)DEEPR 150.06 1.0196e-11 18101500.0 3294.0 3576.8 3582.4 3055.0 5022.3 4347.5 3599.5 3699.7000000000003 5858.6 4001.8999999999996 4622.8 True False 3849.946669432058 3758.843842251974 4090.438188145084 3803.4751371441616 4283.526323000583 4807.549564363064 4253.482557317317 4224.143804856061 4531.636454261754 3097.86801055974 3474.831177210577 1.1079521487782336 1.0817342341418117 1.1771617035589872 1.0945783962366205 1.2327293340447079 1.383534715554822 1.2240832260322363 1.2156400093793895 1.3041314018310173 0.8915161205174161 1.0 11.762727171644245 -5.767255168815254 23.401113582173785 1.1768018939906435 1.0948431856790086 0.04405129324048285 0.12988612997158752 140.949842809665 567171.748279418 0.018200570565702366 0.059014589287643256 1.7090108942670684e-06 5.767255168815254 -0.08195870831163488 YIEIDS(ph)DEEPR ddPTM_A549_PD325901_60min_R1 2 YIEIDSDEEPR 11 0 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(1)DEEPR;YIEIDS(1)DEEPR 167.71 5.7684e-15 35028000.0 6568.5 7034.6 7169.1 7430.700000000001 8306.7 6945.1 7119.299999999999 8460.0 7157.299999999999 7681.4 7578.1 True False 7235.329284525873 7627.430429930844 7655.638237300432 7889.677462655873 7723.2660485593 6888.541408240568 7390.228857330443 8291.258663258386 6856.5035711812025 7196.395093084078 6646.041741533863 1.088667445362148 1.1476651406300802 1.1519094424967544 1.1871242717827086 1.1620850949962316 1.0364878338321626 1.111974487181723 1.247548388305009 1.0316672446295478 1.082809192742626 1.0 12.698279638798681 -8.93241462409606 11.529640564833207 1.0139494336014254 1.1399830648047822 0.39512624856524414 0.05522533193818802 0.3127825921379564 52.25516935187331 0.008904831268413228 0.009469717418988107 1.1683833942673121e-09 8.93241462409606 0.12603363120335676 YIEIDS(ph)DEEPRGELLSLR ddPTM_A549_MK2206_60min_R1 4 YIEIDSDEEPRGELLSLR 18 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR 250.67 5.498699999999998e-87 121512100.0 9596.68 11005.73 9998.11 9132.34 14302.88 11164.220000000001 11014.35 9941.06 15553.8 15067.59 14439.6 True False 11216.36496770044 11565.874647726401 11415.99233845334 11369.763709966324 12198.94529891057 12345.610350190547 13015.514822944308 11350.235698219416 12030.889134314764 11663.810954104265 10853.848807313721 1.033399779822107 1.0656012307756573 1.0517920915538113 1.0475328993255333 1.1239280660230382 1.1374407889182703 1.1991612426159812 1.0457337207950796 1.1084445110574888 1.07462441767613 1.0 13.405919096930205 -4.372204794021616 16.268238418134697 1.0696611867378771 1.0808003923093097 0.0 0.05510614232616788 0.0 0.0 0.008410416446254227 0.0 4.244193793898217e-05 4.372204794021616 0.011139205571432553 YIEIDS(ph)DEEPRGELLSLR ddPTM_A549_PD325901_60min_R1 5 YIEIDSDEEPRGELLSLR 18 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR 241.76 4.026099999999999e-75 545154000.0 9212.130000000001 10719.199999999999 10163.53 10351.1 12406.97 11864.199999999999 10704.5 11398.060000000001 11228.3 12202.9 12381.899999999998 True False 10147.33865598833 11622.544603035674 10853.28826407081 10990.463937946248 11535.547228922887 11767.58188876298 11111.865605227162 11170.716751694914 10756.413598465051 11432.406811440062 10859.004795331035 0.9344630421704303 1.0703139764735101 0.9994735676640752 1.0121060028145246 1.0623024343706653 1.0836703832954009 1.023285818052576 1.028705388959576 0.9905524310192685 1.0528042879542303 1.0 13.406604268821418 -8.75474550505702 23.284527695943527 0.9955386470150361 1.029803811236156 0.0 0.041876062490561916 91.93981133830752 319808.7618543693 0.006116690093297918 0.006852427371603274 1.7589540525123461e-09 8.75474550505702 0.034265164221119915 YIEIDS(ph)DEEPRGELLSLRDIER ddPTM_A549_PD325901_60min_R1 2 YIEIDSDEEPRGELLSLRDIER 22 2 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(0.999)DEEPRGELLSLRDIER;YIEIDS(1)DEEPRGELLSLRDIER 85.46700000000001 4.9294e-06 2889000.0 433.25 324.72 393.57 458.47 229.22 776.4100000000001 516.9 824.99 507.15999999999997 338.977 441.82000000000005 True False 477.23322105820733 352.08529400493916 420.2800269286707 486.7886506390836 213.12037796607098 770.0871743779152 536.5709123585334 808.5349272578648 485.8458288964076 317.57393436982323 387.478940927738 1.231636537241408 0.9086565921800651 1.0846525644010414 1.256297050553429 0.5500179634428607 1.9874297491732096 1.3847743856061585 2.0866551491082213 1.2538638299494431 0.8195901785254659 1.0 8.597974093336534 -7.207032117018306 24.99996897337369 1.2795354059549586 1.019077647110158 0.16294438721122717 0.4036139511139535 655.0060167649257 300973.0709948585 0.06059742320573631 0.10495778210603804 6.208231213168978e-08 7.207032117018306 -0.2604577588448007 YIEIFK ddPTM_A549_MK2206_60min_R1 2 YIEIFK 6 0 P31943;G8JLB6;E9PCY7;P55795;H0YB39;D6RBM0;E7EN40;E5RGV0 P31943 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 ; 116.35 0.053632000000000006 5517400.0 3351.0 3209.3 3196.7 3370.5 4415.8 3279.1 3334.0 3027.7 4443.4 4563.6 4709.4 False True 3916.566875915854 3372.6396619713873 3650.040128417653 4196.272651307497 3766.24166957489 3626.0921855095835 3939.744644004987 3456.8857469423715 3436.976994651741 3532.679590442148 3539.926007172167 1.1063979495561724 0.9527429825194526 1.031106334150032 1.1854125320149405 1.0639323143885464 1.0243412371227074 1.1129454785277308 0.976541809048678 0.9709177501699631 0.997952946836929 1.0 11.78950348954623 -8.280590688807134 24.54673633244281 0.9851536199196028 1.0649296885027135 0.3288462298533873 0.05606863113866167 586.35329804633 751542.948310881 0.00918968780621325 0.01111910237268379 5.2409414892459026e-09 8.280590688807134 0.0797760685831107 YIEIFK ddPTM_A549_PD325901_60min_R1 1 YIEIFK 6 0 P31943;G8JLB6;E9PCY7;P55795;H0YB39;D6RBM0;E7EN40;E5RGV0 P31943 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 118.03 0.051136 4745700.0 2650.1 2761.6 3073.7 2775.2 3310.7 3378.1 2832.3 3253.1 3717.9 2837.9 3767.8 False True 2919.136201099492 2994.3297238360415 3282.2997656596153 2946.617801063504 3078.1678532949604 3350.589873605485 2940.0847263940304 3188.214368492418 3561.64959234552 2658.714509680956 3304.3844860520844 0.8834129967082408 0.9061686787585421 0.9933165403464127 0.8917297044279425 0.9315404627663664 1.0139830542566808 0.8897526116601215 0.9648436439373129 1.0778556815586564 0.8046020434073206 1.0 11.690165847886812 -8.589363570902 5.859487692393716 1.0365073984001472 0.9328844878380589 0.0 0.08191414749781581 0.11874912960625529 7.6412776348662526 0.007783658004293646 0.008846083259389735 2.5741652846970153e-09 8.589363570902 -0.10362291056208828 YIES(ph)PDVEK ddPTM_A549_MK2206_60min_R1 1 YIESPDVEK 9 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 YIES(1)PDVEK 90.82700000000001 0.0010507 3231200.0 1790.5 1961.9 2032.7 1998.8 2231.2 2054.7 1870.3 2055.2 2828.8 3438.7 2642.0 True False 2092.6926264778695 2061.7523300475705 2320.967425480827 2488.5060897295416 1902.9934356527683 2272.1269902005256 2210.1093004446684 2346.530893786032 2188.081316665357 2661.8952817191284 1985.9184845094635 1.0537656217016278 1.0381857795924783 1.1687123331520441 1.2530756469313094 0.9582434780160787 1.1441189595260541 1.1128902408049148 1.1815846985107459 1.101798152206549 1.3403849666954664 1.0 10.955590690807574 -10.315167955094989 0.8370037718213348 1.0035681461718828 1.1136845464627818 0.0 0.12528924204896752 0.6499567580888349 0.8674973693053275 0.04029771765635817 0.014318088110549994 4.8398515937152367e-11 10.315167955094989 0.11011640029089897 YIES(ph)PDVEK ddPTM_A549_PD325901_60min_R1 1 YIESPDVEK 9 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 YIES(1)PDVEK 112.13 0.0002917 4779700.0 3504.7 2827.5 2932.6 3452.6 3435.4 2873.1 3026.2 2997.1 3169.5 3164.6 3648.7 True False 3860.4945639762213 3065.783348112114 3131.623871156385 3665.85926057648 3194.1093554866097 2849.702426173269 3141.363697000181 2937.320489320535 3036.2969372331504 2964.7866159259856 3199.93303101498 1.206429799173553 0.9580773467436238 0.9786529407970367 1.1456049939312993 0.998180063310099 0.8905506454519075 0.981696700072432 0.9179318632142913 0.9488626505005556 0.9265152074090723 1.0 11.643825997014233 -6.98952545057134 24.955356529942733 0.9647684900783999 1.0591756772054306 0.38847300438841914 0.07186140559621512 207.71142949624917 494863.54443538864 0.009815902872213888 0.018536750459125447 1.0244117458654278e-07 6.98952545057134 0.09440718712703067 YIEVFKSS(ph)QEEVR ddPTM_A549_MK2206_60min_R1 1 YIEVFKSSQEEVR 13 1 P52597 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed 1 YIEVFKS(0.124)S(0.876)QEEVR 69.594 0.00090048 3254500.0 1236.1 1525.3 1731.2 1211.2 1403.1 1351.3 1384.7 1272.5 2215.5 1828.3 1928.2 True False 1444.7234602565177 1602.9312549169476 1976.7101918593034 1507.9440543728338 1196.7058486753301 1494.2936690796566 1636.2820661528804 1452.88077186781 1713.6927874265045 1415.2857601905034 1449.374724387261 0.9967908477687095 1.105946742375133 1.363836527986218 1.0404100671828216 0.8256704277641178 1.0309919470352193 1.1289572245332458 1.0024190069148826 1.1823669604497808 0.9764802272157953 1.0 10.50121492519086 YIEVFKSS(ph)QEEVR ddPTM_A549_PD325901_60min_R1 1 YIEVFKSSQEEVR 13 1 P52597 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed 1 YIEVFKS(0.289)S(0.711)QEEVR 59.673 0.0024745 5149600.0 1559.7 1699.1 2164.5 1841.9 2159.4 1952.2 2073.4 2471.7 2374.5 2055.3 2407.5 True False 1718.0395958095469 1842.2891199919695 2311.395986195866 1955.669979741593 2007.7311935255818 1936.3019304498469 2152.304371608014 2422.4000044888617 2274.708022546178 1925.5280072403082 2111.392762399913 0.8136996708545777 0.8725468576002567 1.0947257314497087 0.926246416379055 0.9509037017080118 0.9170733010607419 1.0193765982041159 1.1472995681464033 1.0773495405755928 0.9119705445289384 1.0 11.043979259207097 -7.863729993004721 5.060567732573526 1.0473783364343683 0.9352148973224951 0.2643473268667079 0.0833532194635961 0.19177374616588003 7.951804440149164 0.012032680544614826 0.01679791645905006 1.3685794262553403e-08 7.863729993004721 -0.11216343911187321 YIIGHDAGS(ph)WLK ddPTM_A549_MK2206_60min_R1 1 YIIGHDAGSWLK 12 0 Q86SJ6;Q86SJ6-2 Q86SJ6 DSG4 Desmoglein-4 1 Y(0.013)IIGHDAGS(0.987)WLK 50.563 0.008856399999999999 6351200.0 2094.9 1621.4 1742.5 1816.2 1654.2 1416.1 1660.4 1500.6 2054.3 2386.7 2801.4 True False 2448.4679046123906 1703.9223344406598 1989.6127017761298 2261.169081532315 1410.8693713054888 1565.9507620688964 1962.0731874342766 1713.3146453947622 1589.0043300430011 1847.5428123648605 2105.735065293266 1.1627616146817559 0.8091817259087882 0.9448542385834451 1.073814611724387 0.6700127639794026 0.7436599161399282 0.9317759008591228 0.8136420737981815 0.7546079068696614 0.877386164487674 1.0 11.040108218636728 -5.2538007825383675 24.289941627727597 0.870648835713867 1.1627618267306017 0.36121838800491846 0.11448338936332232 604.384969091619 1921810.6128549401 0.017415532292829987 0.2503056959139078 5.574413971108274e-06 5.2538007825383675 0.2921129910167347 YIIGHDAGS(ph)WLK ddPTM_A549_PD325901_60min_R1 1 YIIGHDAGSWLK 12 0 Q86SJ6;Q86SJ6-2 Q86SJ6 DSG4 Desmoglein-4 1 Y(0.01)IIGHDAGS(0.99)WLK 41.644 0.028368 10315000.0 1932.6 2333.9 2090.6 2216.6 2560.0 2520.8 2289.2 2440.3 2423.8 2493.1 2622.9 True False 2128.796129295075 2530.5859438227612 2232.4806877990654 2353.5143477361485 2380.1944315205546 2500.271440568577 2376.3167586983045 2391.6263021216855 2321.9361149915467 2335.685240524892 2300.2999279330134 0.9254428535360399 1.1001112998758718 0.9705172185112015 1.023133687549585 1.034732211490061 1.086932799591596 1.0330464866090736 1.0397019419422995 1.0094058113013007 1.015382912533356 1.0 11.16760626597563 -3.6316462296929726 14.970712838465058 1.0161526858384136 0.5316950879171307 0.0 0.046622922747891135 0.0 0.0 0.00556134251625714 0.0 0.0002335359639493361 3.6316462296929726 -0.48445759792128285 YILGNPLT(ph)PGVTQGPQIDKEQYDK ddPTM_A549_MK2206_60min_R1 2 YILGNPLTPGVTQGPQIDKEQYDK 24 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 YILGNPLT(0.982)PGVT(0.018)QGPQIDKEQYDK;YILGNPLT(0.988)PGVT(0.012)QGPQIDKEQYDK 122.78 1.4809999999999998e-16 99050000.0 2494.16 3169.1 3402.8 3167.8999999999996 4064.6000000000004 2728.3999999999996 3082.0 3303.3 4066.5 3855.4 3587.9 True False 2915.1132316425815 3330.393653679469 3885.3682075201236 3944.0356422124332 3466.7027243430625 3017.117477034659 3641.9595059458215 3771.552890931977 3145.4442428661164 2984.4624623084096 2696.9254089975398 1.0809024313083035 1.2348853411253196 1.440665802086211 1.4624192530702769 1.2854277366283011 1.118724851257987 1.3504116553596326 1.3984639242706685 1.16630746715212 1.1066166132558144 1.0 11.397099905027785 -9.479545467538545 0.9031807702308083 1.0285736250930382 1.3003434459859855 0.3536147361390528 0.1211968669639297 0.32789398334476755 0.5672239576106027 0.03782080454804431 0.026564581525751012 3.3147786462404877e-10 9.479545467538545 0.2717698208929473 YILGNPLT(ph)PGVTQGPQIDKEQYDK ddPTM_A549_PD325901_60min_R1 2 YILGNPLTPGVTQGPQIDKEQYDK 24 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 1 YILGNPLT(0.956)PGVT(0.044)QGPQIDKEQYDK;YILGNPLT(0.996)PGVT(0.004)QGPQIDKEQYDK 168.96 2.6655e-41 103301000.0 5870.1 4707.3 5198.0 5845.6 6913.3 6194.5 6355.9 7043.900000000001 7441.4 8244.4 8298.2 True False 6466.028230660778 5104.000691270787 5550.767538113241 6206.669435679164 6427.733657590259 6144.054045779928 6597.77725258193 6903.403888667351 7128.663836165569 7723.847177001889 7277.574006623869 0.8884867711102021 0.7013327087605363 0.7627222386280194 0.8528486869429299 0.8832247740441931 0.844244804681857 0.9065901970322522 0.9485858724877332 0.9795384876439915 1.0613216945608293 1.0 12.829241890043638 -7.6392178117302505 0.5831753795338752 0.9978190689341007 0.7771479329660679 0.736667102244325 0.05093086809077343 0.2695625283159203 0.18447179359754964 0.010707006459564277 0.023940860869731254 2.294997349311387e-08 7.6392178117302505 -0.22067113596803278 YILGNPLTPGVTQGPQIDKEQYDK ddPTM_A549_MK2206_60min_R1 2 YILGNPLTPGVTQGPQIDKEQYDK 24 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 191.5 8.852900000000001e-51 59537000.0 5312.1 5658.2 6356.700000000001 5467.7 7749.799999999999 5582.3 5969.0 5180.200000000001 8490.0 8280.9 8714.8 False True 6208.652611624178 5946.178211873778 7258.175644981542 6807.286745454381 6609.814686097981 6173.015280769157 7053.490036012523 5914.509213697156 6567.028555744084 6410.238938665177 6550.674643755888 0.9477882736157983 0.9077199731697382 1.108004295694955 1.0391733852852998 1.009028084213962 0.9423480200857302 1.07675780276096 0.9028855095611984 1.0024965233166914 0.9785616424676846 1.0 12.677427779873957 YILGNPLTPGVTQGPQIDKEQYDK ddPTM_A549_PD325901_60min_R1 2 YILGNPLTPGVTQGPQIDKEQYDK 24 1 P00352 P00352 ALDH1A1 Retinal dehydrogenase 1 0 ; 228.48 2.3685999999999994e-88 131563000.0 9426.3 9881.400000000001 9004.7 9821.0 11629.8 10636.3 11187.3 11523.5 9613.900000000001 11833.3 11186.4 False True 10383.251036724707 10714.14025677632 9615.813091659928 10427.620864890694 10812.962968631935 10549.68149925402 11613.038823425455 11293.654752489138 9209.86121623783 11086.143418516389 9810.543716432136 1.058376715587467 1.0921046342039848 0.9801508835391004 1.062899383183522 1.1021777468379046 1.0753411639748232 1.1837303985480678 1.1511752130081099 0.9387717421626496 1.1300233441646759 1.0 13.260117379849012 -8.771182290864742 24.99997760631277 0.971086651253797 1.0871424229113344 0.022407081691103503 0.06994991765964736 127.04159102812268 325983.27642231254 0.009762294457638666 0.010455635370441885 1.6936267679480058e-09 8.771182290864742 0.11605577165753744 YIPET(ph)LNKSIR ddPTM_A549_PD325901_60min_R1 1 YIPETLNKSIR 11 1 A0A5F9ZI01;A0A5F9ZH32;A0A5F9ZI39;P23458 A0A5F9ZI01 JAK1 Tyrosine-protein kinase JAK1 1 YIPET(0.938)LNKS(0.062)IR 60.448 0.0032911999999999998 4949800.0 1264.1 1075.2 1171.6 905.57 1236.4 1566.3 1140.3 1194.5 1300.6 1327.2 1223.5 True False 1392.430501418765 1165.8108774147283 1251.1118214031314 961.5050022013111 1149.5595293484437 1553.5445721051108 1183.694740496103 1170.6747604328787 1245.9403049583332 1243.4003654986304 1073.0172564055206 1.2976776404167447 1.0864791506895755 1.1659754900813117 0.8960759917526748 1.0713336831127307 1.4478281340127737 1.103146043020164 1.0910120535754466 1.1611558877739618 1.1587887874831322 1.0 10.067457562555663 -10.75794863360955 0.7960197509278012 0.9908242510905748 1.143516037941344 0.0 0.1398146552769198 1.2541636270975072 1.2694961394979267 0.12297367355696329 0.024728726550358154 1.746028653093959e-11 10.75794863360955 0.15269178685076923 YIPETLNKS(ph)IR ddPTM_A549_PD325901_60min_R1 2 YIPETLNKSIR 11 1 A0A5F9ZI01;A0A5F9ZH32;A0A5F9ZI39;P23458 A0A5F9ZI01 JAK1 Tyrosine-protein kinase JAK1 1 YIPET(0.162)LNKS(0.838)IR;YIPET(0.012)LNKS(0.988)IR 56.568999999999996 0.0041548999999999996 9300200.0 6952.5 5983.200000000001 6607.4 5972.9 7390.400000000001 8180.9 6443.5 6767.3 8953.9 6667.4 7173.1 True False 7658.312681840009 6487.425262042229 7055.817897523938 6341.832467559885 6871.323799495908 8114.277462768746 6688.710918518496 6632.320892655847 8577.598721025995 6246.419226134394 6290.854174027338 1.2173724696176256 1.031247122024615 1.1215993412555736 1.008103556706658 1.092271988733282 1.2898530530670482 1.063243676213918 1.0542798655289614 1.363503028959056 0.992936579570323 1.0 12.61904020462319 -7.045088591238568 24.885344117461184 1.1652966604987518 1.0867616465231862 0.0 0.1213980653134589 986.1046431916241 544250.5250201684 0.021268156874325674 0.03683887660011832 9.013872458891812e-08 7.045088591238568 -0.07853501397556562 YIS(ph)FEER ddPTM_A549_MK2206_60min_R1 1 YISFEER 7 0 Q14192 Q14192 FHL2 Four and a half LIM domains protein 2 1 YIS(1)FEER 58.981 0.031424 1184300.0 463.16 669.89 381.82 437.13 624.75 456.2 395.16 374.12 764.84 515.26 604.49 True False 541.3300848251828 703.9845396684678 435.96781738431105 544.2268696235113 532.8501026013208 504.4747811989483 466.9554569661096 427.15265569444824 591.6049611985054 398.86240813638847 454.3784499247258 1.1913639058253351 1.5493352287836115 0.9594817215837046 1.1977391747202584 1.1727010880238598 1.1102524366693043 1.0276795852520455 0.9400812379310949 1.302009286084129 0.8778198178246913 1.0 8.82775060268954 -5.764203052478343 24.999994728444435 1.1184737773378497 1.37034954849309 0.3416894696032797 0.14904078722527284 58.41415728643003 528436.1874656951 0.01977387680702142 0.0657709587063148 1.7210637110632032e-06 5.764203052478343 0.2518757711552404 YISENES(ph)PRPSQK ddPTM_A549_MK2206_60min_R1 2 YISENESPRPSQK 13 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 YISENES(1)PRPSQK;YISENES(1)PRPSQK 103.61 3.3793e-05 86261000.0 9841.8 12266.0 11872.2 12272.900000000001 15155.099999999999 11227.7 11877.3 11929.099999999999 18714.6 16591.7 16958.1 True False 11502.85523109181 12890.287007678018 13555.856480933475 15279.761050951409 12925.804865839575 12415.807761655928 14035.25166773858 13620.086456336581 14475.772981075184 12843.623446563894 12746.93575024978 0.9024016011743377 1.0112459386504264 1.063460014746512 1.1987007191631915 1.0140323226769452 0.9740229342108856 1.1010686758551798 1.0684988708811598 1.135627672775516 1.0075851716999686 1.0 13.637862857281903 -5.362505708814564 2.455348520857775 1.0674071998893875 0.8843402562788519 0.35861328664238423 0.06238096472006636 0.37145425598710097 3.169748703446835 0.009429318302301233 0.128631786537088 4.340045586037343e-06 5.362505708814564 -0.18306694361053555 YISENES(ph)PRPSQK ddPTM_A549_PD325901_60min_R1 4 YISENESPRPSQK 13 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 YIS(0.004)ENES(0.991)PRPS(0.005)QK;YIS(0.009)ENES(0.991)PRPSQK;YISENES(1)PRPSQK;YISENES(1)PRPSQK 126.63 2.2879000000000003e-07 126752000.0 23879.1 24558.9 23748.6 25758.7 27849.6 25747.799999999996 25865.2 26838.5 25801.2 26380.7 26121.0 True False 26303.288653135678 26628.564692467065 25360.322807933073 27349.756396747794 25893.540171904257 25538.118453455867 26849.514339980535 26303.185063104054 24716.865290089896 24715.018099841585 22908.28259466173 1.1481999379239838 1.1623989961898 1.107037278029857 1.1938806972427105 1.1303134604223093 1.1147984729072167 1.1720439639694868 1.1481954159773387 1.0789488556357174 1.0788682214702936 1.0 14.483581685200456 -9.402611462239856 0.7012665419354887 1.0093118819808995 1.1503919391734296 0.5877206972918683 0.03331545260377528 0.17243999527265375 0.18559649060214367 0.00970012397774159 0.00641780949253545 3.957204896266726e-10 9.402611462239856 0.14108005719253014 YISPDQLADLYK ddPTM_A549_MK2206_60min_R1 2 YISPDQLADLYK 12 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 201.6 2.9064000000000002e-24 36161000.0 6212.4 6780.7 6225.299999999999 6079.5 8124.5 6705.5 6566.799999999999 5976.6 9859.0 8077.9 8705.4 False True 7260.901241402464 7125.808667288629 7108.141149134548 7568.977772919128 6929.396812460072 7415.0715592493425 7759.902557963992 6823.801352569867 7625.952241587863 6253.096779654795 6543.608923182695 1.1096172351740865 1.0889722706446159 1.0862723051727354 1.156697758343069 1.0589564403689542 1.1331776770734616 1.1858750498478312 1.0428192504589486 1.1654046461381031 0.9556036818614458 1.0 12.675870813283382 -10.956035975217938 1.1723742651848703 0.9988625779603267 1.1177112145765753 0.5644591557664678 0.04490989754083542 0.3136671932568559 0.7541324115096666 0.030586989644456438 0.006830859341095503 1.1065321194859093e-11 10.956035975217938 0.11884863661624856 YISPDQLADLYK ddPTM_A549_PD325901_60min_R1 2 YISPDQLADLYK 12 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 199.7 3.8044e-24 51715000.0 10913.9 10164.6 11184.2 10566.400000000001 13328.1 12731.300000000001 11847.6 12239.2 12461.5 13011.3 11808.400000000001 False True 12021.871093611462 11021.206514666797 11943.227068058126 11219.062529964478 12391.980235448873 12627.620513849066 12298.466901255488 11995.079554533351 11937.78649103357 12189.76429747765 10356.041659615004 1.1608558065667713 1.0642296426486682 1.1532617828907157 1.0833350133878814 1.1965942821351645 1.2193481765424368 1.1875644484142307 1.1582687622153964 1.1527364299418401 1.1770679085826328 1.0 13.338185053492143 -10.534326719550597 0.7938203734622965 0.9977248314746596 1.1527960470274519 0.0 0.06701339520172225 0.3588295626881267 0.3972459598668399 0.03323935874614293 0.008869145284859645 2.921953366537582e-11 10.534326719550597 0.15507121555279224 YKAEDEKQR ddPTM_A549_MK2206_60min_R1 1 YKAEDEKQR 9 2 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 34.378 0.053792999999999994 7499500.0 1093.2 1212.1 1084.6 1137.8 1446.2 948.11 1069.3 675.93 1616.3 1886.5 1816.7 False True 1277.7054338260848 1273.790712702308 1238.4125890079722 1416.561051077783 1233.465895769556 1048.4383708955174 1263.5779687566073 771.7451474488086 1250.210630700727 1460.3383397688478 1365.5632516307112 0.93566184671438 0.9327951020805433 0.9068877531151341 1.0373456149952571 0.9032652967898713 0.7677699071379568 0.9253163244160852 0.5651478586050229 0.9155274420337295 1.069403660376009 1.0 10.415280424617025 -4.337951597657764 16.598462925795918 0.9182437351581669 0.9043510255273752 0.0 0.13210312196852195 0.0 0.0 0.016758648362746868 0.0 4.592491935423756e-05 4.337951597657764 -0.0138927096307917 YKAEDEKQR ddPTM_A549_PD325901_60min_R1 2 YKAEDEKQR 9 2 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65;E9PM13 P11142 HSPA8 Heat shock cognate 71 kDa protein 0 ; 53.683 0.007111399999999999 36017000.0 3046.0 3563.3 3223.1 3649.2 3503.8 4578.5 4309.4 4844.200000000001 4308.5 3905.7 4129.0 False True 3355.227677653316 3863.591796402439 3441.838948074796 3874.6027960654837 3257.7051754537965 4541.214213996836 4473.396575194165 4747.578630798618 4127.428728212345 3659.093435449067 3621.1591758875325 0.9265617761282096 1.0669488991616853 0.950479882517513 1.0699896380875975 0.8996304821798796 1.2540774910519645 1.2353493337110077 1.311065987491424 1.1398086987437464 1.010475722750364 1.0 11.822235879652451 -7.246671557652752 24.946562453314876 1.113842719234006 0.9904583669437456 0.3677668764249761 0.10606713221158232 1038.7794721935547 1754759.6624397386 0.017969695995804513 0.03103962027186124 5.666676787847227e-08 7.246671557652752 -0.12338435229026035 YKDAIHFYNK ddPTM_A549_MK2206_60min_R1 2 YKDAIHFYNK 10 1 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 73.067 0.0065182 7016600.0 2680.7 2882.0 3157.5 2715.0 4039.3999999999996 3074.5 3441.3999999999996 2972.7 4773.9 4069.0 4434.5 False True 3133.13662317745 3028.6814899827204 3605.28097897167 3380.1751218809804 3445.209610960822 3399.8415493120706 4066.657833796865 3394.0893285119387 3692.619272351789 3149.8100739567685 3333.2912640261957 0.9399528499027763 0.9086159144474086 1.0815979443143366 1.0140653348721032 1.0335759278351941 1.019965337564138 1.2200127476663576 1.0182396495445485 1.1077997630160799 0.9449549482670155 1.0 11.702731670759158 -5.759044859652668 24.99974662618225 1.0568104284163617 0.9242843390446637 0.3264079286252476 0.06828527547570688 44.26608623734979 462124.5460313018 0.008553593558369717 0.03027309885415385 1.7416269659342342e-06 5.759044859652668 -0.13252608937169807 YKDAIHFYNK ddPTM_A549_PD325901_60min_R1 2 YKDAIHFYNK 10 1 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 83.0 0.0035905999999999998 13801300.0 5168.700000000001 5583.6 6169.6 5765.9 7355.9 7668.0 6188.0 6729.6 6689.2 5923.5 6795.8 False True 5693.422619004171 6054.149567645903 6588.306156818673 6122.046547691 6839.246960477367 7605.554350317301 6423.487726203527 6595.372848730933 6408.076186319602 5549.489199089169 5959.959682125579 0.9552787137267429 1.015803778975688 1.1054279740478041 1.027195966786744 1.1475324205613076 1.2761083557539825 1.0777736878771358 1.106613668631184 1.0751878415449625 0.9311286476874255 1.0 12.541086855853848 -4.307370347852645 12.882494689854035 1.0624251247916132 1.0793099961219872 0.0 0.09201520167851703 19965255.911500983 0.0 0.011845225142445995 0.0 4.927534255879368e-05 4.307370347852645 0.016884871330373974 YKDIIRQPS(ph)EEEIIK ddPTM_A549_MK2206_60min_R1 2 YKDIIRQPSEEEIIK 15 2 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 YKDIIRQPS(1)EEEIIK;YKDIIRQPS(1)EEEIIK 178.88 1.3261e-28 23260000.0 2716.3 3732.1000000000004 3756.7 3020.4 4175.8 3495.2 2767.71 3198.4 4636.4 5115.2 4460.5 True False 3174.745032841013 3922.047948912041 4289.4565490745445 3760.3981355909063 3561.5453516488124 3865.059744074011 3270.5670811814753 3651.7829946891993 3586.2628028094077 3959.6727673393098 3352.8347464627 0.9468838379793175 1.1697707299919482 1.2793522119156029 1.1215578517725018 1.062248998524698 1.1527737083229996 0.9754632508005298 1.0891628340889437 1.0696211039309285 1.1809925232720864 1.0 11.711165662415315 -7.508176257721458 1.302277796651922 1.0347999021901733 1.1362474914200673 0.0004800740631104583 0.09437337548277137 0.49358863708554657 1.6717459911236425 0.013792315338022061 0.02503465473426441 3.103299863226701e-08 7.508176257721458 0.10144758922989405 YKDIIRQPS(ph)EEEIIK ddPTM_A549_PD325901_60min_R1 4 YKDIIRQPSEEEIIK 15 2 B1AKZ5;Q15121;Q15121-2 B1AKZ5 PEA15 Astrocytic phosphoprotein PEA-15 1 YKDIIRQPS(1)EEEIIK;YKDIIRQPS(1)EEEIIK;YKDIIRQPS(1)EEEIIK;YKDIIRQPS(1)EEEIIK 132.59 4.3385e-10 48438700.0 7390.5 7338.000000000001 8628.9 7854.799999999999 9747.2 10242.3 10650.7 10697.7 9099.5 9753.7 10188.0 True False 8140.778119401451 7956.399012713242 9214.50904379095 8339.97315645489 9062.59029801452 10158.89010462374 11056.018216786666 10484.3259813167 8717.079659363642 9137.84971742315 8934.940587053085 0.9111172077850868 0.8904814682530996 1.031289347031917 0.9334111486471085 1.0142865763591538 1.1369846285653185 1.2373913524178402 1.173407464679587 0.9756169696298678 1.0227096227885484 1.0 13.12524242075047 -6.843947282640296 5.062660149229192 1.035102722751768 0.944394861338071 0.28619741541624355 0.08901560600004352 0.33466560791900096 14.917429063416648 0.015624172943457876 0.03024065043137279 1.4323617576815623e-07 6.843947282640296 -0.09070786141369691 YKDLDEDELLGNLS(ph)ETELK ddPTM_A549_MK2206_60min_R1 2 YKDLDEDELLGNLSETELK 19 1 H0YNU8;Q9NYL9 H0YNU8 TMOD3 Tropomodulin-3 1 YKDLDEDELLGNLS(0.866)ET(0.134)ELK;YKDLDEDELLGNLS(0.859)ET(0.141)ELK 96.90299999999999 4.890899999999999e-07 6551700.0 1295.87 1463.21 1169.73 1401.31 1929.28 1456.73 1277.74 1695.4099999999999 2161.41 2435.46 2188.74 True False 1514.5811750203154 1537.68113912478 1335.6153030981882 1744.631012907195 1645.485467701763 1610.880201700886 1509.8888186655454 1935.7395594753664 1671.854086062523 1885.2878944995693 1645.2154518490697 0.9205974654067749 0.9346381578148739 0.8118178695666153 1.060427077162685 1.0001641218798363 0.9791302408996985 0.9177453426957365 1.176587271472423 1.0161915779380226 1.14592158272078 1.0 10.684060811455799 -6.27189058997882 24.96482071924503 1.0137006706020413 0.8935798607430991 0.3963123526007408 0.07750555952709708 485.56774626355957 1159876.5919957662 0.008890644415300328 0.020864999785651792 5.346990469605859e-07 6.27189058997882 -0.12012080985894213 YKDLDEDELLGNLS(ph)ETELK ddPTM_A549_PD325901_60min_R1 2 YKDLDEDELLGNLSETELK 19 1 H0YNU8;Q9NYL9 H0YNU8 TMOD3 Tropomodulin-3 1 YKDLDEDELLGNLS(0.983)ET(0.017)ELK;YKDLDEDELLGNLS(0.997)ET(0.003)ELK 176.48 5.3369e-35 95296000.0 7606.3 7063.3 7277.3 7998.8 8392.5 6949.2 8339.4 8055.6 7889.299999999999 8050.0 8900.6 True False 8378.485976537893 7658.549079653506 7771.181339959892 8492.867709407157 7803.03975255323 6892.608019199915 8656.760430494784 7894.924738504054 7557.740156779769 7541.721626178402 7805.882625552087 1.0733553626737127 0.9811253188183622 0.9955544699738884 1.0880086361542596 0.9996358037732272 0.8830017500695408 1.1090046886123293 1.0114070525042862 0.9682108378160801 0.966158727712742 1.0 12.93034605427894 -2.0000000000049716 0.29015951203347473 0.9880785456060674 1.4312482538157305 0.07917397378602176 0.05847137471944234 98.29218107996579 1.2268711829755523 0.019899577574825217 22.736311895307054 0.009999999999885526 2.0000000000049716 0.44316970820966306 YKDLDEDELLGNLSETELK ddPTM_A549_MK2206_60min_R1 1 YKDLDEDELLGNLSETELK 19 1 H0YNU8;Q9NYL9 H0YNU8 TMOD3 Tropomodulin-3 0 111.95 3.3526e-10 1332500.0 621.38 875.97 634.48 822.65 1314.2 829.45 771.38 549.91 1458.4 1143.7 1405.6 False True 726.2537527175749 920.5531314296185 724.458804604258 1024.199286930162 1120.8829209102125 917.2218484556506 911.5297610955508 627.8614265287449 1128.07472858624 885.3373756658526 1056.5507274135127 0.6873818112789333 0.8712815272799793 0.685682935809214 0.9693801351473691 1.0608888828785232 0.868128547600411 0.8627411230192608 0.5942558272292141 1.067695756878443 0.8379506565039251 1.0 10.04514632068176 -2.4084988776125664 0.14218206268629538 1.076752809483488 2.8237914556975935e-16 0.0 0.15248919227622518 61.059844618561186 0.6122309737873296 0.32487157105736253 13.232132093667312 0.0039039219143303643 2.4084988776125664 -1.0767528094834877 YKDLDEDELLGNLSETELK ddPTM_A549_PD325901_60min_R1 1 YKDLDEDELLGNLSETELK 19 1 H0YNU8;Q9NYL9 H0YNU8 TMOD3 Tropomodulin-3 0 133.47 1.1948000000000002e-16 1276100.0 1413.5 1345.4 1475.2 1862.0 1817.1 1610.8 1753.0 1364.2 1858.4 2155.6 1909.4 False True 1556.9974794362975 1458.7815796817104 1575.3159430982403 1977.0115110911813 1689.4731646546882 1597.6821788590382 1819.7113742784081 1336.9899608058035 1780.297910760085 2019.4950481230035 1674.5559046838607 0.9297972525618623 0.8711453440290569 0.940736549130406 1.1806183989207701 1.00890818868997 0.9540930669380456 1.0866829642345988 0.7984146465735426 1.0631462979411173 1.2059884310068847 1.0 10.70956282557017 -6.0126374710207715 24.70247775974894 1.0205558446552228 0.9018386737280363 0.20769315400567034 0.10541605621130366 519.903775673748 1016264.0013192713 0.011748190446576247 0.0329239458847605 9.713204423777921e-07 6.0126374710207715 -0.11871717092718648 YKDNPFSLGES(ph)FGSR ddPTM_A549_MK2206_60min_R1 2 YKDNPFSLGESFGSR 15 1 A0A0D9SF70;G5E9L0;Q8N6H7-2;Q8N6H7;H0YDN9;E9PQP3;Q8N6H7-3;E9PMU9 A0A0D9SF70 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 YKDNPFSLGES(1)FGSR;YKDNPFSLGES(0.609)FGS(0.391)R 121.46 1.3845e-07 24618000.0 5754.5 7503.0 6551.0 6561.9 10260.1 8281.5 8330.5 9082.5 13214.2 13084.5 13503.3 True False 6725.718915982626 7884.870652095887 7480.03030664874 8169.565794574884 8750.852881472283 9157.842833185203 9844.04401826141 10369.972188989694 10221.20479874128 10128.702362420087 10150.057937879114 0.6626286231217302 0.7768301127297265 0.7369445920829607 0.8048787351337958 0.8621480719646809 0.9022453752711054 0.9698510174532415 1.0216663050059922 1.0070095029306831 0.9978960144277276 1.0 13.309200342078356 -6.963530715917872 0.7590396117898547 1.0073221092625704 0.7042507087965075 0.9543708606628126 0.025522798499097502 0.09360647585801074 0.09985340770783782 0.004310193803414129 0.014736025409407414 1.0876002132821812e-07 6.963530715917872 -0.30307140046606285 YKEALLGR ddPTM_A549_PD325901_60min_R1 1 YKEALLGR 8 1 J3KTF8;J3QQX2;P52565;J3KRE2;J3KS60;J3KRY1;P52565-2 J3KTF8 ARHGDIA Rho GDP-dissociation inhibitor 1 0 45.368 0.050866 1798500.0 1780.7 2019.5 2234.6 2437.1 2533.9 2578.1 1912.6 2705.7 2143.9 2066.8 2034.9 False True 1961.4753531179438 2189.6903524358654 2386.2533937414096 2587.634131944316 2355.9276054804445 2557.104808366332 1985.385039614877 2651.732690919412 2053.7993386130793 1936.301895277705 1784.6202002939065 1.0990996027025308 1.226978352074715 1.33712113835113 1.449963488880246 1.3201282856108265 1.432856586485576 1.112497235707579 1.4858806879372441 1.1508327308381032 1.0849938238728993 1.0 10.801401359782753 -9.278753542396188 1.2828653830409924 1.0395705006776659 1.3093097104898892 0.38462648251787357 0.12585031127467894 0.24312303904863808 0.8310266212989422 0.02866664609104037 0.024525021694146935 5.263158604377141e-10 9.278753542396188 0.2697392098122233 YKEET(ph)IEK ddPTM_A549_MK2206_60min_R1 2 YKEETIEK 8 1 P61254 P61254 RPL26 60S ribosomal protein L26 1 Y(0.002)KEET(0.998)IEK;Y(0.016)KEET(0.984)IEK 54.7 0.0088729 19218200.0 6149.8 5777.3 5738.6 5652.799999999999 9552.0 7330.799999999999 7453.1 8209.1 10738.7 9883.3 9195.2 True False 7187.735891825523 6071.339893156546 6552.4197706814975 7037.736253763837 8146.913453457891 8106.540390208789 8807.231795510963 9372.76506431437 8306.401596180094 7650.655665750047 6911.778065390393 1.0399257360153018 0.8784049250015413 0.9480078365785031 1.0182237026683711 1.178700093721504 1.1728588958608168 1.274235328766088 1.3560570052512204 1.2017749293445998 1.1069012334263832 1.0 12.754841178508793 -6.5833113888679815 3.769721723819332 1.141785784691066 0.95091291498841 0.5028470891461871 0.09738068630443181 0.21084849603208025 6.099963372744015 0.01816431771881337 0.040269661765541975 2.610289107645494e-07 6.5833113888679815 -0.19087286970265593 YKEET(ph)IEK ddPTM_A549_PD325901_60min_R1 2 YKEETIEK 8 1 P61254 P61254 RPL26 60S ribosomal protein L26 1 Y(0.004)KEET(0.996)IEK;Y(0.001)KEET(0.999)IEK 50.354 0.023463 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YKEETIEK ddPTM_A549_MK2206_60min_R1 2 YKEETIEK 8 1 P61254 P61254 RPL26 60S ribosomal protein L26 0 ; 78.655 0.0042858 14753200.0 6254.700000000001 7697.6 7723.6 5895.9 8705.3 7231.6 6690.0 7489.299999999999 8658.7 10999.6 9647.7 False True 7310.340447266756 8089.3749608920825 8818.922618902803 7340.395764677009 7424.761901841179 7996.843112052422 7905.486403237353 8550.931210019322 6697.518275102627 8514.782720446028 7251.909827025714 1.0080572734127622 1.115482011475844 1.216082773952497 1.012201742680464 1.023835386668943 1.1027223590467938 1.0901247522102322 1.1791281764360253 0.9235523379155882 1.1741434909620583 1.0 12.82414527084294 -8.774134575522648 24.999813306216712 0.9638997102652237 1.0934450867010697 0.0 0.08986606524044213 150.27030378932227 295916.34654750174 0.011476642927904426 0.012257275063411262 1.6821527289569656e-09 8.774134575522648 0.12954537643584596 YKEETIEK ddPTM_A549_PD325901_60min_R1 2 YKEETIEK 8 1 P61254 P61254 RPL26 60S ribosomal protein L26 0 ; 104.22 0.0021011 27362000.0 14601.099999999999 15777.3 14447.8 14884.7 17916.199999999997 16644.5 16217.8 17737.6 16840.1 17030.1 18953.0 False True 16083.392923238289 17106.908441439173 15428.314589679198 15804.094113393612 16657.827919534608 16508.952710466383 16834.977253720677 17383.80965312198 16132.369160025237 15954.816579624956 16621.901152965966 0.9676024887422948 1.0291788095723733 0.9281919347069522 0.9507994282936506 1.002161411395605 0.9932048421260508 1.0128189969843908 1.0458376267037337 0.9705489770131753 0.9598671314910342 1.0 14.020797781338521 -6.779588705217631 24.957071124533286 0.9939194560221928 0.9703349024798785 0.16040032135608817 0.0308833292282932 398.59826114018625 548110.6320589634 0.004441123438814677 0.008405486690572199 1.6611593491375252e-07 6.779588705217631 -0.023584553542314257 YKLDEDEDEDDADLS(ph)KYNLDASEEEDSNK ddPTM_A549_MK2206_60min_R1 1 YKLDEDEDEDDADLSKYNLDASEEEDSNK 29 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YKLDEDEDEDDADLS(0.511)KY(0.461)NLDAS(0.026)EEEDS(0.001)NK 56.903 0.00074094 4536600.0 1230.9 1066.3 1275.5 1053.3 1475.3 1146.7 764.52 1107.0 1140.1 1466.3 1412.2 True False 1438.6458273843118 1120.57011546446 1456.3850795497597 1311.3585472844343 1258.2853243180925 1268.043032882144 903.4233878928283 1263.920640045317 881.8691703655871 1135.061811610422 1061.51176526278 1.355280152762293 1.0556360768993078 1.3719914627505119 1.2353688298120784 1.185371058046258 1.1945633335191876 0.8510724209158279 1.1906798223121249 0.8307672125963466 1.0692880180460689 1.0 10.051904646100576 -7.683040062667565 6.010468775881283 0.938138747464999 1.2321638947797755 0.4670618453747394 0.12529928219840644 0.11254757564461484 6.6924281304007005 0.01830676496436063 0.02717395581430555 2.0747221202810126e-08 7.683040062667565 0.29402514731477647 YKLDEDEDEDDADLS(ph)KYNLDASEEEDSNK ddPTM_A549_PD325901_60min_R1 2 YKLDEDEDEDDADLSKYNLDASEEEDSNK 29 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YKLDEDEDEDDADLS(1)KYNLDASEEEDSNK;YKLDEDEDEDDADLS(0.774)KY(0.017)NLDAS(0.21)EEEDSNK 138.59 1.3484e-28 17631600.0 3640.4 3377.5 3653.1000000000004 3735.9 4417.4 3862.8 3546.2 3760.0 4286.7 3883.9 3792.1000000000004 True False 4009.970728079163 3662.133778337281 3901.0213338748517 3966.6580581555 4107.137063202697 3831.3426375072595 3681.1525815551 3685.003850337061 4106.544906400801 3638.6698911694807 3325.6957401024756 1.205753935853315 1.101163204492194 1.172994055600122 1.1927302940927706 1.2349707803023926 1.1520424407162404 1.1068819486901322 1.108039982702541 1.2347927252882924 1.0941078726153588 1.0 11.699440470628183 -10.9390372572831 1.1273438815634322 0.9974030615219717 1.1707911968866982 0.400662965644505 0.05287331421041121 0.27116727009367464 0.5970401100190922 0.037707662354410344 0.00830164384096107 1.1507016682408333e-11 10.9390372572831 0.17338813536472653 YKLDEDEDEDDADLSKYNLDAS(ph)EEEDSNKK ddPTM_A549_MK2206_60min_R1 2 YKLDEDEDEDDADLSKYNLDASEEEDSNKK 30 3 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YKLDEDEDEDDADLSKYNLDAS(0.997)EEEDS(0.002)NKK;YKLDEDEDEDDADLS(0.002)KY(0.004)NLDAS(0.955)EEEDS(0.039)NKK 91.53200000000001 5.607699999999999e-10 23282200.0 2140.02 2171.39 2781.79 2182.77 3164.25 1963.26 1938.01 2806.71 3513.87 3646.59 3145.3 True False 2501.2030575343024 2281.904476243433 3176.2896514627378 2717.5487479882677 2698.7930166566284 2171.0108700934848 2290.1213309922323 3204.569737688881 2717.984055497346 2822.8227863332545 2364.2352041361128 1.057933260260473 0.9651765916738544 1.3434744757653452 1.149440945314599 1.141507838109856 0.9182719495485933 0.9686520727657629 1.3554360970865524 1.1496250672278152 1.193968680186669 1.0 11.207157852733083 -10.799091566194704 1.161000326889632 1.0028630111006431 1.1186801021069277 0.0 0.14584311092211058 0.947439911354756 2.3519643457060027 0.08298414286622251 0.022972558364237446 1.5882118563668227e-11 10.799091566194704 0.11581709100628457 YKLDEDEDEDDADLSKYNLDAS(ph)EEEDSNKK ddPTM_A549_PD325901_60min_R1 3 YKLDEDEDEDDADLSKYNLDASEEEDSNKK 30 3 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YKLDEDEDEDDADLSKYNLDAS(1)EEEDSNKK;YKLDEDEDEDDADLSKYNLDAS(1)EEEDSNKK;YKLDEDEDEDDADLSKYNLDAS(1)EEEDSNKK 289.21 2.0250999999999993e-185 228452000.0 20371.9 22626.2 22468.0 22287.8 27052.7 23381.399999999998 23609.9 25270.9 24078.5 26161.8 25311.6 True False 22440.040290999863 24532.989280655805 23992.813591059716 23664.466786733632 25152.611678748483 23190.98963047847 24508.387664333 24766.85207486245 23066.564380239277 24509.939483199276 22198.433663452393 1.0108839493457258 1.1051675831095702 1.080833627940227 1.0660421877285389 1.1330804713559526 1.0447128829931918 1.104059324000131 1.1157026865205681 1.0391077465170968 1.1041292306831791 1.0 14.438170262174726 -9.102854306405693 2.179192705780952 1.0138743567495168 1.0835856111234126 0.0 0.04307474309851519 0.1749710773412152 1.7108346885444585 0.006292771578742502 0.006067215873206504 7.891248024144546e-10 9.102854306405693 0.0697112543738958 YKPESEELTAER ddPTM_A549_PD325901_60min_R1 1 YKPESEELTAER 12 1 H7BZ94;P07237;H0Y3Z3;I3L398 H7BZ94 P4HB Protein disulfide-isomerase 0 44.925 0.055536 14702000.0 4532.1 3998.0 5024.6 4414.6 5693.3 5499.4 4759.7 4606.3 4826.8 5075.9 6309.7 False True 4992.195455644321 4334.92549098222 5365.599571374339 4687.279815715964 5293.42224881874 5454.614709720259 4940.832988107777 4514.423732927555 4623.946381649147 4755.406807741486 5533.646900483793 0.9021528741213802 0.7833758765134127 0.9696317216960912 0.847050760558316 0.9565883664091305 0.9857178833082711 0.8928710264610148 0.8158134796300194 0.8356056078035784 0.8593621698785538 1.0 12.434014873826182 -10.948546362852696 1.2382171662328538 0.9993629463211473 0.8839060784250491 0.0 0.07387513966462211 0.4521870469897891 1.2434066535574055 0.043478525049873214 0.01038885681943134 1.1257802804661762e-11 10.948546362852696 -0.11545686789609821 YKPLNTT(ph)PNATK ddPTM_A549_PD325901_60min_R1 2 YKPLNTTPNATK 12 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 YKPLNT(0.236)T(0.748)PNAT(0.016)K;YKPLNT(0.409)T(0.59)PNAT(0.001)K 83.69200000000001 0.00021531 27502000.0 12026.7 11883.7 13324.1 12839.3 15609.0 14492.5 14265.2 15452.3 15436.099999999999 14763.1 15712.699999999999 True False 13247.641730411404 12885.181104848783 14228.353550322168 13632.354400834041 14512.677688126701 14374.477884973057 14808.069992216964 15144.091754405152 14787.374397483714 13830.955346513587 13780.13751101187 0.9613577309968828 0.935054609908797 1.0325262385046683 0.989275643290226 1.053159134045611 1.0431302208331552 1.074595226671988 1.0989797266031147 1.0730933842762418 1.0036877596802722 1.0 13.750302664214662 -5.952688673107548 1.1640584556554276 1.0444062076495133 0.9394145941415424 0.5215524026724536 0.03357060519046913 0.4634877565794159 0.970737759955767 0.005777715233151502 0.04353522354411403 1.1150936094283286e-06 5.952688673107548 -0.10499161350797093 YKPS(ph)PER ddPTM_A549_MK2206_60min_R1 4 YKPSPER 7 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 Y(0.013)KPS(0.987)PER;YKPS(1)PER;YKPS(1)PER;Y(0.001)KPS(0.999)PER 60.06399999999999 0.0081043 143931000.0 8814.5 10784.7 9276.800000000001 9066.6 13445.999999999998 10700.4 10841.399999999998 11215.4 16072.3 16348.9 16212.199999999999 True False 10302.172106165413 11333.595164821876 10592.389734196156 11287.91740701514 11468.111211808497 11832.709225649334 12811.142046645367 12805.217295721988 12431.94971218912 12655.672135195819 12186.263306042503 0.8453922131369941 0.9300303858691584 0.8692073581689285 0.9262820869312809 0.9410687200663131 0.9709874904624898 1.0512773050204012 1.0507911222772102 1.0201609303833763 1.03851950490193 1.0 13.572968197364087 -7.062449715608478 1.3897037986256457 1.0159304360505756 0.8881271944937186 0.8306659138395782 0.028078404476467825 0.12980182135220686 0.49438355173935083 0.004362938523254982 0.009681216131755413 8.660645940562661e-08 7.062449715608478 -0.12780324155685707 YKPS(ph)PER ddPTM_A549_PD325901_60min_R1 4 YKPSPER 7 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 Y(0.001)KPS(0.999)PER;YKPS(1)PER;Y(0.017)KPS(0.983)PER;Y(0.003)KPS(0.997)PER 70.55199999999999 0.0071343000000000005 318505000.0 27854.6 25964.300000000003 27244.199999999997 28283.5 29413.4 29401.100000000002 26394.1 28104.999999999996 29959.7 29701.1 29561.0 True False 30682.378486527276 28152.402682718766 29093.15524468348 30030.507558510948 27347.50425472139 29161.667189503652 27398.541918905703 27544.423727054032 28700.597996663193 27825.767477178557 25925.1844026184 1.1834970201187232 1.0859094479526796 1.122196656072584 1.1583527080130591 1.0548624777364877 1.1248393352433925 1.0568311296616466 1.0624581603466663 1.1070547291368342 1.0733103010973453 1.0 14.66206663033518 -14.999999999999998 0.1424948828435369 0.6293352662691862 1.145591116291787 0.3484858056593698 0.04021355399536265 33.61512213945366 0.3201248687759708 3.542725542966427 0.07608670314988875 1.000000000000004e-15 14.999999999999998 0.5162558500226007 YKPVCNQVECHPYFNQR ddPTM_A549_MK2206_60min_R1 2 YKPVCNQVECHPYFNQR 17 1 B4DK69;P52895;S4R3P0;Q04828;H0Y804 B4DK69;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 116.43 5.061e-09 8023900.0 1841.63 1985.02 2077.05 1842.13 2548.3 2081.9 1810.5100000000002 1759.8 2168.6000000000004 2500.34 2455.8 False True 2152.4521204693865 2086.0490392940646 2371.606922366779 2293.4519326963573 2173.4484457125977 2302.2052761466266 2139.4562313789647 2009.2570391614722 1677.4155625425951 1935.5114574384534 1845.9570833680305 1.1660358411703386 1.130063671625548 1.284757345517306 1.2424188803522196 1.1774100629398407 1.2471607801120441 1.1589956509039918 1.088463571154912 0.9086969451543674 1.0485137898802213 1.0 10.850153296837624 -8.449363196796732 2.469469872304667 0.9571705971316565 1.205693311534924 0.7435661188938303 0.054816422069914016 0.08497803889795269 1.0202847823099563 0.00925330090425828 0.0111291883161624 3.5533403143615335e-09 8.449363196796732 0.24852271440326745 YKPVCNQVECHPYFNQR ddPTM_A549_PD325901_60min_R1 2 YKPVCNQVECHPYFNQR 17 1 B4DK69;P52895;S4R3P0;Q04828;H0Y804 B4DK69;Q04828 AKR1C2;AKR1C1 Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C1 0 ; 120.66 3.0649e-09 14277600.0 2564.5 2719.2 2932.2 2964.3 2908.4 2787.7 2821.5 3699.8 2563.3999999999996 2447.1 2881.0 False True 2824.84615211488 2948.3565270332297 3131.196724750992 3147.398078586244 2704.1240174353075 2764.9978954589888 2928.873726484043 3626.004586563047 2455.6692124636243 2292.589688375302 2526.6552641637154 1.1180180344269726 1.1669009891656474 1.2392655100842855 1.2456776843389377 1.0702386098288448 1.094331282417414 1.1591900834376214 1.435100639961344 0.9719051297947501 0.907361491253582 1.0 11.303013121636145 YKPVTNQVECHPYLTQEK ddPTM_A549_MK2206_60min_R1 2 YKPVTNQVECHPYLTQEK 18 1 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 159.8 3.5085000000000006e-22 31335000.0 3043.2 3683.5 3796.1 3079.5 4307.299999999999 3906.2999999999997 3620.1000000000004 3132.8 4813.2 4792.3 4231.7 False True 3556.8177609033487 3870.974416499427 4334.444061527902 3833.977638244009 3673.701875845805 4319.66207320792 4277.825310666601 3576.883993797625 3723.017885100992 3709.7161016031005 3180.852101021458 1.1181965234287874 1.21696145987308 1.3626675883911716 1.2053303694984168 1.154942688050815 1.3580204096319848 1.344867719342523 1.124504969171308 1.1704467126608715 1.1662648824231123 1.0 11.635197577607295 -9.806306137818698 0.5938378253761214 1.0049824760315538 1.2472818343337606 0.23342549349154296 0.09485955211627774 0.44841054197466185 0.3298061660238839 0.0486072246871236 0.021093721349430116 1.5620461550415474e-10 9.806306137818698 0.24229935830220684 YKPVTNQVECHPYLTQEK ddPTM_A549_PD325901_60min_R1 2 YKPVTNQVECHPYLTQEK 18 1 O60218;C9JRZ8;C9JRZ8-2 O60218;C9JRZ8 AKR1B10;AKR1B15 Aldo-keto reductase family 1 member B10;Aldo-keto reductase family 1 member B15 0 ; 187.31 2.7003999999999998e-39 68141000.0 5291.5 5569.0 5951.299999999999 5488.299999999999 5724.5 5788.6 5630.7 6071.4 4951.3 5875.0 6188.2 False True 5828.689184603583 6038.319174407198 6355.191006074132 5827.299826166343 5322.430868452902 5741.459560804211 5844.979369737265 5950.301164078839 4743.214079609559 5504.051497366228 5427.090630231831 1.0739988663787243 1.112625453640021 1.171012507267205 1.073742862097259 0.9807153097470094 1.0579258670974048 1.0770005087399073 1.0964071856350515 0.8739883673928883 1.0141808700790225 1.0 12.405963285970785 -8.748327286829518 24.937578320252463 0.9404945062553426 1.0801102898404287 0.4622589558754703 0.05513519258570465 131.68022333557877 250439.29225099 0.010692399448529498 0.01208808454770615 1.7851417746641556e-09 8.748327286829518 0.13961578358508608 YKSEDEANRDR ddPTM_A549_PD325901_60min_R1 1 YKSEDEANRDR 11 2 P54652 P54652 HSPA2 Heat shock-related 70 kDa protein 2 0 37.18 0.045229000000000005 3396500.0 906.65 828.76 1126.3 1101.0 1253.4 1197.4 971.38 1330.2 1180.8 1070.8 1935.4 False True 998.6924405595469 898.6025137334734 1202.7374909921018 1169.006269447578 1165.3655079952596 1187.648771396705 1008.3463974595319 1303.6681174782875 1131.175082342611 1003.1895052561285 1697.3580695114383 0.5883805300121542 0.529412461562765 0.7085938509947366 0.688721072144819 0.6865761143320186 0.6997043185699489 0.5940681672133982 0.7680572183885341 0.6664327949777883 0.5910299796346938 1.0 10.72907522822033 -14.999999999999998 0.20773616363352804 2.7096856188142553 0.6048664094345026 0.0 0.13866550462344315 12.969254988577807 0.15546166253809046 8.996607584341314 0.046290591030609986 1.000000000000004e-15 14.999999999999998 -2.1048192093797526 YKVDYESQST(ph)DTQNFSS(ph)ESKR ddPTM_A549_PD325901_60min_R1 1 YKVDYESQSTDTQNFSSESKR 21 2 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 2 Y(0.219)KVDY(0.175)ES(0.068)QS(0.247)T(0.283)DT(0.008)QNFS(0.449)S(0.457)ES(0.093)KR 77.51 0.006392 18547000.0 1938.5 2454.6 2282.9 2752.2 2967.3 2853.1 3106.2 3004.2 2551.5 2561.3 2529.2 True False 2135.2950929517256 2661.4577564194483 2437.831322192905 2922.197143300295 2758.887084629277 2829.865299542289 3224.40814077786 2944.2788742506928 2444.269328080261 2399.5790808858083 2218.124433919775 0.9626579376245015 1.1998685536844447 1.0990507497746074 1.3174180395895612 1.2437927478008477 1.275791951194312 1.453664227069454 1.3273731758356264 1.101953204564296 1.0818054407549058 1.0 11.115124585762908 -8.977131349432472 3.6558134733582595 1.0416559886187269 1.2406789072203306 0.28812291342214646 0.12211605634150632 0.1895156758071429 5.1268579387432816 0.023288496821423043 0.02384100375961991 1.054068052415169e-09 8.977131349432472 0.1990229186016037 YKVDYESQSTDTQNFS(ph)S(ph)ESKR ddPTM_A549_PD325901_60min_R1 1 YKVDYESQSTDTQNFSSESKR 21 2 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 2 Y(0.005)KVDY(0.04)ES(0.019)QS(0.031)T(0.225)DT(0.058)QNFS(0.802)S(0.648)ES(0.173)KR 66.325 0.001034 19981000.0 4294.5 4887.3 5337.1 5537.2 5860.5 5698.1 6109.6 7114.2 5750.0 5743.0 4955.4 True False 4730.474478556193 5299.1699229808455 5699.307700589492 5879.220268106385 5448.878697627428 5651.696562799036 6342.1041713014 6972.3017000180635 5508.347496163624 5380.38599989349 4345.917214868753 1.088487020040729 1.2193444239689413 1.3114165362125085 1.3528146021722915 1.2537925662700375 1.3004611646680244 1.4593246621456715 1.6043337586283561 1.2674763976906487 1.2380323264063782 1.0 12.085444977626786 -10.134053211643627 0.9911952253097521 1.0269700888716295 1.3204868941557855 0.17307851876251468 0.14124843935143366 0.33993000095836196 0.6668628326949877 0.05428235436478635 0.025832801410293635 7.344238778452303e-11 10.134053211643627 0.2935168052841559 YKVDYESQSTDTQNFS(ph)SESK ddPTM_A549_MK2206_60min_R1 2 YKVDYESQSTDTQNFSSESK 20 1 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 1 YKVDYESQSTDTQNFS(0.909)S(0.09)ES(0.001)K;YKVDYESQSTDTQNFS(0.903)S(0.095)ES(0.002)K 197.33 2.7160000000000002e-55 96251000.0 2988.3 3082.8999999999996 3264.1 2309.13 4277.2 3847.2999999999997 3700.4 3663.4 4363.0 3354.5 3189.4 True False 3492.651983079484 3239.8064418694403 3726.9984619038546 2874.866953660785 3648.029545972577 4254.418732368947 4372.714781246562 4182.698168691974 3374.787466279321 2596.7161201985705 2397.3839570380333 1.4568596627278068 1.3513923926779836 1.5546105791533533 1.1991683456548536 1.5216709594068176 1.7746088272090046 1.8239526332065095 1.7446926498414113 1.4076958579671441 1.0831456982830618 1.0 11.227245269391432 -9.943642941164432 0.9309901239735972 1.0485191731618322 1.5415424703298584 0.5247765786533114 0.1811527773793334 0.30580448996642806 0.5398738744838927 0.07561196241010473 0.03988240659583639 1.1385629801898103e-10 9.943642941164432 0.4930232971680262 YKVDYESQSTDTQNFS(ph)SESK ddPTM_A549_PD325901_60min_R1 3 YKVDYESQSTDTQNFSSESK 20 1 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 1 YKVDYESQSTDTQNFS(0.887)S(0.109)ES(0.004)K;YKVDYESQSTDTQNFS(0.999)S(0.001)ESK;YKVDYESQSTDTQNFS(0.998)S(0.002)ESK 287.32 4.735399999999999e-128 111199000.0 6315.0 6147.2 7649.0 6385.7 7312.7 5435.8 6359.0 7223.7 7392.5 6402.4 6002.4 True False 6956.09415114271 6665.246117600278 8168.107137173571 6780.130186023065 6799.081179445455 5391.532647033749 6600.995224778322 7079.617636616976 7081.818933111235 5998.15137135958 5264.142852348588 1.3214105973661525 1.2661598107328318 1.5516499772663623 1.2879836995681304 1.2915837146045641 1.0241995322426187 1.2539544252362564 1.3448756683072185 1.34529383638434 1.1394355243766827 1.0 12.361982924491038 -10.788781754617943 0.8387054097471485 0.9826450683177754 1.2996116458411682 0.3202859953119578 0.12248754365675085 0.5214244189464037 0.5921103731986112 0.10992145722244318 0.022306218431977252 1.6263658457196763e-11 10.788781754617943 0.31696657752339275 YKVDYESQSTDTQNFS(ph)SESKR ddPTM_A549_MK2206_60min_R1 4 YKVDYESQSTDTQNFSSESKR 21 2 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 1 YKVDYESQSTDTQNFS(0.897)S(0.09)ES(0.013)KR;YKVDYESQSTDTQNFS(0.944)S(0.056)ESKR;YKVDYESQSTDTQNFS(0.46)S(0.46)ES(0.08)KR;YKVDYESQSTDTQNFS(0.993)S(0.007)ESKR 289.04 5.017299999999999e-145 459068000.0 49807.0 56795.6 61118.5 47639.399999999994 84305.79999999999 57284.0 51871.2 54202.0 83278.4 82363.2 82312.6 True False 58213.20393576272 59686.25344637837 69786.02233199688 59311.05513861395 71904.5284992178 63345.75485795829 61295.52560831175 61885.29948666327 64415.97536827778 63757.29591627335 61872.10970780987 0.9408634069643612 0.9646713798550886 1.1279075929616809 0.9586072855557947 1.1621476758879872 1.0238175998379186 0.9906810337934001 1.0002131781010166 1.0411149009219385 1.0304690791596771 1.0 15.917001607182964 -5.544971770454292 24.99660724041678 1.0283586672204903 0.9468152680572215 0.23791461553982562 0.0571393437182702 204.6223023139131 231514.66187430848 0.007214453021519666 0.027945106006086153 2.851203592369044e-06 5.544971770454292 -0.0815433991632688 YKVDYESQSTDTQNFS(ph)SESKR ddPTM_A549_PD325901_60min_R1 4 YKVDYESQSTDTQNFSSESKR 21 2 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 1 YKVDYESQSTDTQNFS(0.862)S(0.136)ES(0.002)KR;YKVDYESQSTDTQNFS(0.848)S(0.132)ES(0.021)KR;YKVDYESQSTDTQNFS(0.897)S(0.101)ES(0.002)KR;YKVDYESQSTDTQNFS(0.814)S(0.178)ES(0.009)KR 241.84 1.1779999999999997e-86 543069000.0 10963.0 11639.3 12487.3 11949.8 12917.900000000001 12769.1 11803.7 13469.199999999999 13871.199999999999 12724.499999999998 11849.3 True False 12075.95568946595 12620.184659126897 13334.763270234991 12687.912006035122 12010.591268335696 12665.112683181615 12252.896262732476 13200.546239617013 13288.241702397365 11921.072898423237 10391.911218901469 1.1620533927870202 1.2144238334304187 1.2831867968599342 1.2209411472797747 1.15576346018912 1.2187471983156961 1.1790801523059713 1.2702712678690924 1.2787100873444595 1.1471492247489983 1.0 13.343173390140173 -10.824984391709311 1.0221509277915795 0.9973524254613932 1.2236455770951788 0.4116452895041386 0.05907079265958331 0.20188313579957765 0.3673250783511704 0.03352240348755334 0.007901379673410393 1.49628943089862e-11 10.824984391709311 0.2262931516337856 YKVSTS(ph)PLTK ddPTM_A549_MK2206_60min_R1 2 YKVSTSPLTK 10 1 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 YKVS(0.024)T(0.095)S(0.879)PLT(0.002)K;YKVS(0.009)T(0.188)S(0.796)PLT(0.007)K 78.486 0.00037022 30602000.0 8657.4 10368.3 10495.2 9391.6 13325.8 10059.5 9880.9 9455.5 14356.8 13204.8 13847.4 True False 10118.55746689165 10896.002183410066 11983.577175139657 11692.542421604943 11365.592472580513 11123.989613044329 11676.13162955874 10795.846081254293 11105.007723098553 10221.826508868107 10408.70841120225 0.9721242124528796 1.046815969182437 1.1513029956956498 1.123342297591984 1.0919311045689808 1.0687194965585034 1.121765657013933 1.0371936319817923 1.066895841865156 0.982045620364097 1.0 13.345503439122531 -10.20694051714105 0.5513352005246505 0.9958045451027682 1.0826217430401204 0.3236760026604031 0.04665282750102035 0.9967846222327046 0.5418421586642033 0.041301605203280814 0.011513066751726062 6.20954076974017e-11 10.20694051714105 0.08681719793735221 YKVSTS(ph)PLTK ddPTM_A549_PD325901_60min_R1 2 YKVSTSPLTK 10 1 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 YKVS(0.038)T(0.09)S(0.87)PLT(0.002)K;YKVS(0.018)T(0.081)S(0.888)PLT(0.013)K 86.46700000000001 0.00021219999999999998 49786000.0 12958.2 12655.5 14810.8 13811.8 16562.7 17418.5 16921.2 15767.3 16236.3 14683.5 17089.7 True False 14273.706924677343 13722.023399481119 15815.949952575538 14664.923517126299 15399.393090213092 17276.64951108526 17565.145525635922 15452.80883229243 15553.944774254174 13756.381304098215 14987.775240534067 0.9523566170164105 0.9155477166731355 1.0552566807781913 0.9784589962001415 1.0274635723496717 1.1527160791923934 1.1719648342558155 1.031027526387018 1.0377754219444735 0.9178401119129691 1.0 13.87149862756809 -6.803695660815028 4.553973106565248 1.0423630075508818 0.9763299318504677 0.19116611624203583 0.07197549857263537 0.29502847184462283 13.387955229457926 0.010169233058180531 0.020157592473196286 1.5714636482339612e-07 6.803695660815028 -0.06603307570041417 YLAEFATGNDRK ddPTM_A549_MK2206_60min_R1 2 YLAEFATGNDRK 12 1 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 ; 64.55 0.0064548999999999995 10880100.0 3700.6 4570.1 4775.2 4339.0 6393.7 4634.6 4887.0 4611.5 7564.700000000001 6040.6 7142.299999999999 False True 4325.170809016476 4802.698569524642 5452.395164144266 5402.055194785112 5453.195199683173 5125.030295801503 5774.904641647378 5265.194247126452 5851.307528343617 4676.0242646211 5368.669792548042 0.8056317442022621 0.8945788724408058 1.0155951799666352 1.006218561306082 1.0157441992898233 0.95461827488725 1.0756676914015477 0.9807260365379113 1.0898989422790537 0.8709837716433285 1.0 12.390348957337856 -4.21521694197892 0.6698573527468408 1.0358701042813607 2.5716155216415806e-12 0.40997570882929 0.06327504565156225 3.8916225506848985 0.4290676428997763 0.0071445197520835805 4.271155177329949 6.092324929144567e-05 4.21521694197892 -1.035870104278789 YLAEFATGNDRK ddPTM_A549_PD325901_60min_R1 2 YLAEFATGNDRK 12 1 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 ; 151.26 2.5310000000000004e-12 21003000.0 7160.1 7267.6 8147.3 8126.1 9043.2 8839.9 8204.4 9247.7 10655.7 9224.6 9042.2 False True 7886.988081012969 7880.066157644417 8700.224771694891 8628.030741287883 8408.03682934636 8767.9107852595 8516.622931619946 9063.247368819695 10207.87798519492 8642.157181719911 7930.066723228447 0.9945676822504792 0.9936948114903535 1.0971187349799374 1.0880148985398808 1.0602731506303549 1.1056540999304423 1.0739661126271967 1.1428967353164858 1.2872373387848548 1.089796275787395 1.0 12.95311728941427 -5.788159102243446 0.6317284063839299 1.132526910778936 0.9438461718825575 0.25623522986047276 0.0684671395001698 2.641886554188815 1.0422512899023653 0.018336687968887 0.31503021286565136 1.6286992551359506e-06 5.788159102243446 -0.18868073889637849 YLAEVAAGDDKK ddPTM_A549_MK2206_60min_R1 2 YLAEVAAGDDKK 12 1 P63104;E7EX29;B0AZS6;P63104-2;H0YB80;B7Z2E6 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ; 161.1 5.1768e-14 22111000.0 8516.8 8355.8 9202.7 8419.0 11102.7 8593.0 7989.3 8308.8 11315.4 10563.6 11654.9 False True 9954.227624231618 8781.07452949257 10507.781239962815 10481.655377943269 9469.507537657759 9502.305556428239 9440.852394825744 9486.597844632819 8752.479966980756 8177.275423261175 8760.666671123898 1.1362408818773835 1.0023294869140424 1.1994271251750275 1.196444947790553 1.0809117494300151 1.0846555305829477 1.0776408633310763 1.082862549251151 0.9990655158505087 0.9334078935127571 1.0 13.096824945188041 -8.363150330856195 0.9649666237042881 0.9969765015762588 1.1213909064656002 0.5217064713906062 0.05548616830632857 0.3013266083841652 0.5503470952532205 0.010840971019671531 0.013716822219044255 4.333608447439085e-09 8.363150330856195 0.12441440488934141 YLAEVAAGDDKK ddPTM_A549_PD325901_60min_R1 3 YLAEVAAGDDKK 12 1 P63104;E7EX29;B0AZS6;P63104-2;H0YB80;B7Z2E6 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ;; 144.47 8.5227e-12 39685000.0 13768.0 13251.3 12185.2 13453.3 16326.699999999999 15273.400000000001 13723.6 14601.3 15810.400000000001 15435.900000000001 15368.199999999999 False True 15165.717224534104 14368.033556441398 13012.160947560116 14284.279786338866 15179.968916057287 15149.01849427964 14245.859107842065 14310.065617001743 15145.943870147034 14461.274639692836 13478.008827046458 1.1252194162464788 1.066035327682003 0.9654364464763133 1.0598212220839665 1.1262768195844692 1.1239804550268546 1.0569706023084622 1.0617344001352476 1.1237523334866433 1.0729533438702938 1.0 13.718319755332502 -5.266995049594613 6.798136448686867 1.062501099955008 1.1261562868477353 0.11081029463203573 0.04774951105467172 0.20889964031962238 66.91579135409744 0.007832266257766379 0.06139234199381893 5.407604868930444e-06 5.266995049594613 0.06365518689272731 YLAEVATGEK ddPTM_A549_MK2206_60min_R1 2 YLAEVATGEK 10 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ; 140.45 1.8343e-07 5786100.0 5995.4 7219.2 6750.3 5592.8 8159.1 6772.799999999999 5211.9 5621.9 8506.8 8940.2 8713.9 False True 7007.276946543099 7586.626444303697 7707.594043500382 6963.036251070337 6958.907198294416 7489.493200579211 6158.834766073658 6418.8215413466705 6580.023382568172 6920.602610761437 6549.998138594627 1.0698135783053195 1.1582639084431083 1.176732249446735 1.0630592717335232 1.0624288818175947 1.1434344013700992 0.940280384170476 0.9799730328967542 1.0045840080162203 1.0565808515246888 1.0 12.677278781321231 -7.753865082819573 24.99999698024884 0.9959828496223989 1.1128036979542693 0.635236727866576 0.04376938133437889 78.23576274702454 258226.78617445292 0.00617524006449645 0.009061102275476992 1.762523503906182e-08 7.753865082819573 0.11682084833187034 YLAEVATGEK ddPTM_A549_PD325901_60min_R1 1 YLAEVATGEK 10 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 125.48 3.8086999999999996e-05 4494300.0 3767.9 3963.5 4274.0 4732.1 4443.1 4349.6 3699.6 3928.9 4869.4 3862.4 4465.4 False True 4150.414434218623 4297.518054904458 4564.059341649866 5024.391069621146 4131.031983862883 4314.178299705286 3840.3903024987994 3850.5350073375766 4664.756051794637 3618.5274048386914 3916.184108502833 1.0598108564935003 1.0973738557320813 1.1654353358261078 1.2829813232509089 1.0548615359767104 1.1016280594005594 0.9806460054215863 0.9832364619879033 1.191148302161408 0.9239931792231452 1.0 11.935232875492462 YLDEDTIYHLQPSGR ddPTM_A549_PD325901_60min_R1 1 YLDEDTIYHLQPSGR 15 0 P31153-2;P31153 P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2 0 94.09 2.4669e-05 3160000.0 774.44 738.97 440.05 512.96 925.22 893.41 724.51 586.44 747.94 851.31 745.02 False True 853.060578687404 801.2455953154407 469.9144392356164 544.6443741833149 860.2357390357222 886.1343651691418 752.0816245170844 574.7429941467196 716.5066828314126 797.5581413145264 653.387263070896 1.305597196183548 1.2262950941982187 0.7191974282250865 0.8335705407287961 1.3165786779996995 1.3562161603890823 1.1510503296044194 0.8796360544976785 1.0966033826001713 1.2206514978055014 1.0 9.351794521374153 -10.68081623198496 0.44943076690142636 0.9787486026912682 1.1003130576724809 0.0 0.20958819374326168 7.271947811742201 1.944467320806076 0.4005407411180688 0.05849703793152385 2.0853731043186653e-11 10.68081623198496 0.12156445498121271 YLEDGGLER ddPTM_A549_MK2206_60min_R1 2 YLEDGGLER 9 0 P07099 P07099 EPHX1 Epoxide hydrolase 1 0 ; 95.09899999999999 0.0025743000000000003 3262000.0 1684.35 1710.21 1259.32 1258.21 1780.54 1501.49 1809.0 1453.52 2151.66 2212.1 2487.0 False True 1968.6271015962004 1797.25238410248 1437.9105122529218 1566.4715064831928 1518.6249246670748 1660.376675191603 2137.671883924719 1659.5609112183106 1664.3124454949727 1712.3850736298268 1869.4092622918367 1.0530744344246619 0.9614012406780874 0.7691790884196694 0.83795000810189 0.8123555153488907 0.8881825444451011 1.1435012798128543 0.8877461691741815 0.8902878995338764 0.9160033108697112 1.0 10.868366731777652 -7.557113719091883 24.999144837778747 0.9573555170671283 0.878547132192987 0.14051538790918583 0.0966896331123852 298.98395585779775 218323.696273492 0.015366441206422714 0.022792183383079635 2.772594011713004e-08 7.557113719091883 -0.07880838487414132 YLEDGGLER ddPTM_A549_PD325901_60min_R1 1 YLEDGGLER 9 0 P07099 P07099 EPHX1 Epoxide hydrolase 1 0 80.438 0.004634 4555500.0 1903.1 2223.5 1851.5 1491.7 2379.3 1909.0 2002.6 2181.9 1756.9 2166.8 2477.9 False True 2096.3013110118277 2410.8821483739293 1977.1539239739648 1583.8389211034985 2212.186176139397 1893.4537369269326 2078.8100388647676 2138.380292832563 1683.0636027843252 2029.9878782115984 2173.1340087022822 0.9646442891313747 1.1094033495953717 0.9098168433499645 0.7288270832636365 1.0179704368348803 0.8713009549087289 0.9565954195830557 0.9840075597130465 0.7744867992698667 0.9341291747690399 1.0 11.085561427303247 -5.842914078322464 8.241290387702813 0.8981763954203128 1.036444754035472 0.22086752789830355 0.09147335100197705 0.26411082432181854 23.36019271341447 0.014122819757509852 0.04429755663943857 1.4357734615120258e-06 5.842914078322464 0.13826835861515918 YLEEDNS(ph)DES(ph)DAEGEHGDGAEEEAPPAGPR ddPTM_A549_MK2206_60min_R1 2 YLEEDNSDESDAEGEHGDGAEEEAPPAGPR 30 0 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 2 YLEEDNS(1)DES(1)DAEGEHGDGAEEEAPPAGPR;Y(0.001)LEEDNS(1)DES(1)DAEGEHGDGAEEEAPPAGPR 122.37 2.2864e-21 14993100.0 1426.0700000000002 1502.3000000000002 2051.99 1392.6399999999999 2523.58 2158.7799999999997 1917.4299999999998 2053.5099999999998 2664.3 2719.1 2092.54 True False 1666.7557519359377 1578.7606531578895 2342.9930375423833 1733.8368625179842 2152.364724966211 2387.220666717813 2265.8022113840666 2344.6013311106217 2060.840304012836 2104.853421503034 1572.9045668340002 1.0596674376061128 1.0037231033893408 1.4895964363931153 1.102315359162517 1.3684013450978587 1.517714880517448 1.4405210965499045 1.4906189355339727 1.3102131861445165 1.3381952509297879 1.0 10.619215425134687 -10.454687243647228 0.9466854961538609 1.0124939821492893 1.312832015139457 0.0 0.1978498920667241 0.5264820283477994 0.8938761847908133 0.09688319707671363 0.03327880815440168 3.5100455822778084e-11 10.454687243647228 0.3003380329901677 YLEEDNS(ph)DES(ph)DAEGEHGDGAEEEAPPAGPR ddPTM_A549_PD325901_60min_R1 2 YLEEDNSDESDAEGEHGDGAEEEAPPAGPR 30 0 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 2 YLEEDNS(1)DES(1)DAEGEHGDGAEEEAPPAGPR;YLEEDNS(1)DES(1)DAEGEHGDGAEEEAPPAGPR 213.06 1.6618e-90 70011000.0 4897.6 5232.2 4236.8 5043.5 5861.3 5312.7 5213.4 5226.700000000001 5373.3 6327.7 5431.2 True False 5394.800746577436 5673.1358564075 4524.334725948094 5355.025540380436 5449.622508387279 5269.4351326200685 5411.798789881946 5122.44936823317 5147.4788871540895 5928.167942107959 4763.196831213461 1.13260084303572 1.1910353607961703 0.9498525646263257 1.1242503155210157 1.14411029010509 1.106281205531798 1.1361694638395299 1.0754225680252198 1.0806773411970736 1.2445775709415123 1.0 12.217714451576962 -10.081564385378122 0.5038014861109438 0.992823791156161 1.110844082998888 0.0 0.09219587936787597 0.9458053206591733 0.44484896237111027 0.050398139359008914 0.015082948372624482 8.287730392314282e-11 10.081564385378122 0.11802029184272689 YLEEDNS(ph)DES(ph)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR ddPTM_A549_MK2206_60min_R1 1 YLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGR 40 1 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 2 Y(0.035)LEEDNS(0.983)DES(0.983)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR 82.78399999999999 7.1857000000000005e-06 8185500.0 971.86 929.22 1020.5 1134.2 1749.3 803.68 1288.6 1124.8 1759.5 1878.4 1573.2 True False 1135.8862083042625 976.5133289804792 1165.2222451434957 1412.0790509161725 1491.9802872836967 888.7248841603925 1522.721940091428 1284.2438445555308 1360.9760593441372 1454.0681353945429 1182.5310218888285 0.960555103653804 0.8257824200000418 0.9853629406544566 1.1941158623142862 1.2616838456386474 0.7515446679283335 1.287680333036186 1.0860128155490067 1.1509009354953603 1.2296236703135235 1.0 10.207662315616293 -6.006061073301541 7.960023835352028 1.086703990784549 0.8956552948008186 0.2548797835647788 0.14648775848742557 0.12503700023986802 68.72248217422197 0.01850122763734408 0.053728161641406 9.861407983768343e-07 6.006061073301541 -0.19104869598373042 YLEEDNS(ph)DES(ph)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR ddPTM_A549_PD325901_60min_R1 2 YLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGR 40 1 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 2 YLEEDNS(1)DES(1)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR;YLEEDNS(1)DES(1)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR 239.65 3.3315999999999993e-143 330250000.0 9274.6 10650.400000000001 9897.1 9757.5 10524.6 9252.900000000001 8965.900000000001 10646.8 9735.6 11734.0 11952.0 True False 10216.150564400341 11547.946585582047 10568.776722097073 10360.198614109662 9785.388403898918 9177.547450189219 9307.102230828732 10434.441221746974 9326.446588460976 10993.11323746303 10481.979769970409 0.9746394086419022 1.1016951796325254 1.0082805876400684 0.9883818554764211 0.9335439123754904 0.875554776062607 0.8879145385771916 0.9954647357401293 0.8897600255993726 1.0487630656335512 1.0 13.355623609265512 -6.419064457443996 2.306619887502712 0.9396947730481647 1.037974657102442 0.2671655765023473 0.057854229054021704 0.25487797956541547 2.633330380470073 0.00795431030905826 0.021671187638142405 3.8100927027759514e-07 6.419064457443996 0.09827988405427723 YLEEDNS(ph)DESDAEGEHGDGAEEEAPPAGPR ddPTM_A549_MK2206_60min_R1 1 YLEEDNSDESDAEGEHGDGAEEEAPPAGPR 30 0 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 1 Y(0.001)LEEDNS(0.548)DES(0.451)DAEGEHGDGAEEEAPPAGPR 85.20299999999999 5.626699999999999e-07 3618000.0 236.62 439.73 303.97 272.99 650.8 388.85 276.19 354.26 452.65 646.51 488.4 True False 276.555671196422 462.11037876131167 347.07751676263456 339.872562254987 555.068182109547 429.9978489022603 326.37014793873317 404.4774398757488 350.1254977335172 500.46294197930445 367.11680084573084 0.753317937395722 1.2587557357678623 0.9454144184168864 0.925788635856542 1.5119661667099697 1.1712834931870992 0.8890090216162018 1.101767717914162 0.9537169013429224 1.3632253844726874 1.0 8.520095329660785 -7.753157575693437 24.95712780975794 0.9827500475711884 1.1064319994733802 0.0 0.22237744770175719 346.9329011621488 1045475.1031284044 0.027936359717058313 0.04104873368842738 1.7653971628682052e-08 7.753157575693437 0.12368195190219178 YLEEDNS(ph)DESDAEGEHGDGAEEEAPPAGPR ddPTM_A549_PD325901_60min_R1 1 YLEEDNSDESDAEGEHGDGAEEEAPPAGPR 30 0 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 1 YLEEDNS(0.728)DES(0.272)DAEGEHGDGAEEEAPPAGPR 88.634 1.3154000000000002e-09 5821700.0 956.54 1035.6 1209.0 1054.9 1260.5 1057.2 1172.5 938.19 1257.5 1138.5 1189.4 True False 1053.6472366324701 1122.8736464385154 1291.0500103076013 1120.058777148274 1171.9668284889297 1048.5905137135426 1217.120129116619 919.477064454183 1204.6516480740459 1066.6149157023744 1043.1113402278113 1.010100452366243 1.0764657646165408 1.2376914721544885 1.0737672326557754 1.123529946700586 1.0052527216169798 1.1668170809559073 0.881475475334563 1.1548639168384027 1.0225321828726643 1.0 10.026677441965116 -7.207338207402265 24.9594491228096 1.0624265427635153 1.1084771801328148 0.08454734040964729 0.0903393805867732 831.543850381316 383629.6789114268 0.013673301762100267 0.023682837020781472 6.203857198636506e-08 7.207338207402265 0.046050637369299485 YLEEDNSDES(ph)DAEGEHGDGAEEEAPPAGPR ddPTM_A549_MK2206_60min_R1 1 YLEEDNSDESDAEGEHGDGAEEEAPPAGPR 30 0 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 1 YLEEDNS(0.192)DES(0.808)DAEGEHGDGAEEEAPPAGPR 89.833 1.1795e-09 3145300.0 332.85 350.58 436.84 538.32 481.39 549.45 282.28 478.04 557.33 639.57 384.08 True False 389.02694259880417 368.4230245517495 498.79048071385097 670.2084241661032 410.5781686934769 607.5924343046084 333.56662210849646 545.8036339361007 431.0956448731274 495.090692799344 288.7023359312619 1.3475018875199847 1.276134546550633 1.727698111984136 2.321451338466743 1.4221504906397182 2.1045636237916416 1.155399803165834 1.8905411075927452 1.493218416409933 1.7148828782501495 1.0 8.173438970444614 -10.030389315988543 0.625980118919955 0.9995463978771041 1.6695209432316622 0.0 0.39680352996886625 0.6453126898287306 0.4963651038981753 0.20731487760614042 0.07594923313075717 9.324180755315152e-11 10.030389315988543 0.6699745453545581 YLEEDNSDES(ph)DAEGEHGDGAEEEAPPAGPR ddPTM_A549_PD325901_60min_R1 1 YLEEDNSDESDAEGEHGDGAEEEAPPAGPR 30 0 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 1 YLEEDNS(0.087)DES(0.912)DAEGEHGDGAEEEAPPAGPR 77.531 3.2816e-06 5053200.0 545.58 565.47 452.4 683.1 701.46 803.51 584.21 667.68 636.11 872.43 659.46 True False 600.9668799652319 613.1241414171375 483.1025845021991 725.2935355673393 652.1918695056287 796.966480962891 606.4424312419789 654.3625986151725 609.3765088321124 817.3446209101643 578.3506006613693 1.0391047908967328 1.0601253646421447 0.8353109410619615 1.254072416866057 1.1276756153790082 1.3779988817363116 1.0485723202301256 1.1314289254076682 1.0536455017687605 1.4132338065794257 1.0 9.17580052072137 -3.9979042931561724 12.598657467343791 1.0650539891906172 1.0866128450838415 0.0 0.17091520974251423 0.0 0.0 0.017664386799058993 0.0 0.00010048372050225788 3.9979042931561724 0.02155885589322426 YLEEDNSDES(ph)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR ddPTM_A549_MK2206_60min_R1 2 YLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGR 40 1 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 1 YLEEDNSDES(1)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR;YLEEDNS(0.045)DES(0.955)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR 135.53 3.335e-30 33805000.0 1368.01 2067.4 1552.5300000000002 1621.47 2815.42 2003.04 1726.88 1909.0900000000001 2796.0699999999997 2510.3 3109.6 True False 1598.8966433666521 2172.621829420635 1772.7020992186485 2018.730222790554 2401.275447564322 2215.0003632896564 2040.631742903217 2179.7093538429217 2162.764609406286 1943.2214865209323 2337.400499405991 0.6840490723660679 0.9295034505095591 0.7584075128199679 0.8636646664974953 1.0273273442760724 0.9476340763393178 0.8730346996254204 0.9325356755921188 0.9252862784772719 0.8313600887031417 1.0 11.190689237012581 -3.347313991386565 0.3264675561575857 0.9689509773624845 2.819247030929454e-15 0.3449685316629416 0.07832446230403575 12.612075312069873 0.34865473561169613 0.01966560442902504 6.324389612137575 0.0004494547852332222 3.347313991386565 -0.9689509773624817 YLEES(ph)DEDDLF ddPTM_A549_MK2206_60min_R1 1 YLEESDEDDLF 11 0 P11388;P11388-2;P11388-3;P11388-4;J3QR57 P11388 TOP2A DNA topoisomerase 2-alpha 1 YLEES(1)DEDDLF 144.77 6.602000000000001e-18 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YLFTGLK ddPTM_A549_PD325901_60min_R1 1 YLFTGLK 7 0 A6NJA2;P54578-2;P54578-3;P54578 A6NJA2 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 0 81.958 0.042046 651050.0 897.89 1125.6 893.41 1040.4 890.22 1282.5 867.19 1107.9 1304.3 1173.7 1179.5 False True 989.0431318083174 1220.4582622935434 954.0421751107646 1104.663145080163 827.694018292277 1272.0557452115204 900.1913899945764 1085.802065369264 1249.4848068254296 1099.592381695105 1034.4289774665406 0.9561247348567329 1.1798376581470236 0.922288717633709 1.0678965585299396 0.8001458160224919 1.22971781815989 0.8702302522491873 1.0496632335537848 1.2078981100138846 1.062994565744048 1.0 10.014618879715737 -8.525718514064794 24.960303095310994 1.0997849802671837 1.0070894521642066 0.08149518008712942 0.12700985575222867 156.98532571134655 1379820.6952467202 0.02147828938269695 0.02442148176245516 2.98044756666956e-09 8.525718514064794 -0.0926955281029771 YLGS(ph)PITTVPK ddPTM_A549_MK2206_60min_R1 1 YLGSPITTVPK 11 0 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;A0A3B3IT42 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 YLGS(0.996)PIT(0.004)TVPK 140.24 2.9362e-09 4731500.0 2897.8 3611.1 2861.5 3109.3 4964.7 3298.7 3398.9 3153.5 5102.6 4414.1 5313.7 True False 3386.8777955920514 3794.889565744827 3267.3037280530275 3871.0786395817795 4234.399206698323 3647.766244500157 4016.43613392578 3600.518282188717 3946.8692471778318 3416.951744274408 3994.1616393406257 0.8479571187687769 0.9501091614237487 0.8180199058224416 0.9691842717263778 1.0601471820748238 0.9132745677018587 1.0055767634353505 0.9014453112576353 0.9881596198568966 0.8554865958901188 1.0 11.963677002911291 -2.154386473206367 0.2833065664345836 0.9959788140384601 2.0005127748530834e-11 0.058212167959807104 0.07060057704953095 33.209969724190614 0.44843285847915704 0.01980428212883571 16.456810900995272 0.007008313598162438 2.154386473206367 -0.995978814018455 YLGS(ph)PITTVPK ddPTM_A549_PD325901_60min_R1 1 YLGSPITTVPK 11 0 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;A0A3B3IT42 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 YLGS(0.756)PIT(0.237)T(0.007)VPK 99.5 0.00027317 6915100.0 6077.4 5351.9 5394.3 6828.4 6718.7 7353.3 6319.4 6636.0 6209.0 6692.8 7769.7 True False 6694.373174054586 5802.923395494685 5760.3896365610335 7250.174759578419 6246.801690256703 7293.417162778842 6559.888225108368 6503.639774158712 5948.057322379121 6270.215465799606 6814.0761561863355 0.9824329844005231 0.8516082389578741 0.8453661955819667 1.0639996667774487 0.9167496146319678 1.07034570726911 0.9626966407108326 0.9544418971974966 0.872907373801366 0.9201857041334985 1.0 12.73430235618475 -6.190438518993015 24.99999556217319 0.9557385215952326 0.8889831233174474 0.18786840628019086 0.06642965546581374 239.71774047970817 84405.47864732637 0.009940867219088441 0.026301061394088693 6.450026233629989e-07 6.190438518993015 -0.0667553982777852 YLGSPIT(ph)TVPK ddPTM_A549_MK2206_60min_R1 1 YLGSPITTVPK 11 0 D6RJC2;P30307-4;P30307-3;P30307-2;P30307;A0A3B3IT42 D6RJC2 CDC25C M-phase inducer phosphatase 3 1 YLGS(0.064)PIT(0.927)T(0.009)VPK 143.96 2.6818000000000003e-11 4988900.0 3188.0 3359.4 3673.6 3068.9 4655.4 3850.2 3938.7 3287.3 5404.8 5269.2 4932.7 True False 3726.0564608832433 3530.3791108424507 4194.571719509208 3820.7806377681563 3970.5968269710884 4257.625608444083 4654.310806641403 3753.284841934028 4180.621429692068 4078.884060381669 3707.774454405689 1.0049307223787118 0.9521558428796951 1.1312909593314373 1.0304781708682926 1.0708841316529127 1.1482968181586786 1.2552842315181851 1.0122743139012305 1.1275285163919633 1.1000895848815766 1.0 11.856337771503869 -6.802720707650564 4.448517115395519 1.080472265738566 1.0310025939692884 0.13317525053374923 0.0773808738455541 0.49355307942999904 21.288695866973143 0.012592358688963393 0.02503556096601769 1.5749954095788312e-07 6.802720707650564 -0.04946967176927752 YLIANATNPESK ddPTM_A549_PD325901_60min_R1 1 YLIANATNPESK 12 0 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 59.198 0.0081164 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YLLGDAPVS(ph)PSSQK ddPTM_A549_MK2206_60min_R1 2 YLLGDAPVSPSSQK 14 0 Q9NYB0;A0A590UJT3;H3BMI8 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 YLLGDAPVS(0.939)PS(0.057)S(0.004)QK;YLLGDAPVS(0.849)PS(0.139)S(0.012)QK 256.57 7.259999999999998e-70 288950000.0 7770.1 9231.2 8800.900000000001 7875.799999999999 11128.8 8967.2 8795.9 8325.7 12562.0 11968.2 12007.2 True False 9081.50291929388 9701.028650356862 10048.99995814149 9805.371353558092 9491.768262232215 9916.103152054386 10394.001174026227 9505.893471386897 9716.727057391898 9264.575307724104 9025.480858138535 1.0062070998804267 1.0748489529628957 1.1134032763561865 1.0864098553504002 1.051663441696097 1.0986786530174457 1.151628521227615 1.0532284784378174 1.0765882959720696 1.0264910483268015 1.0 13.139788082387241 -10.433877108285538 0.7102140688737023 0.9979989759422674 1.0821468123780582 0.3251583896963627 0.035978105327650944 0.5688865135911007 0.5034951110205482 0.02658568814573839 0.0071658938049260126 3.682331573334459e-11 10.433877108285538 0.08414783643579082 YLLGDAPVS(ph)PSSQK ddPTM_A549_PD325901_60min_R1 2 YLLGDAPVSPSSQK 14 0 Q9NYB0;A0A590UJT3;H3BMI8 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 YLLGDAPVS(0.851)PS(0.127)S(0.022)QK;YLLGDAPVS(0.995)PS(0.005)SQK 242.07 1.3742000000000001e-57 469630000.0 16383.8 16566.6 18436.6 17401.4 20819.8 17270.9 18732.0 19809.2 19350.6 17155.6 19697.6 True False 18047.071314883924 17962.725522487763 19687.81854428215 18476.2449565532 19357.48907241082 17130.25151654864 19444.856510543705 19414.089965983225 18537.36157552415 16072.392488206979 17274.92007337424 1.0446978184692037 1.0398152608632694 1.139676389856466 1.0695415595601254 1.1205544795687035 0.9916255151276459 1.1256119523536308 1.1238309574529424 1.0730794409923614 0.9303888191632961 1.0 14.076391415198389 -10.314438375671836 0.8373548049318971 1.0025789565833925 1.0816290326732632 0.4167656690723772 0.04850434186130151 0.5096333866747272 0.6809525613221381 0.022679609563964958 0.008067019751206498 4.847988984095073e-11 10.314438375671836 0.07905007608987069 YLMAEK ddPTM_A549_PD325901_60min_R1 1 YLMAEK 6 0 A0A5F9ZHM4;P07195;A0A3B3IS95;A8MW50 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 57.463 0.044186 2969100.0 2362.7 2386.3 2154.0 2102.1 3176.0 2888.3 2528.1 2869.3 2698.7 2702.4 3001.0 False True 2602.55956467219 2587.401875720577 2300.183393054237 2231.941942784516 2952.9287166051886 2864.7786424128126 2624.308228929401 2812.069560577696 2585.283023982048 2531.770002805532 2631.8960249063916 0.9888534881482466 0.983094260272916 0.8739643858598279 0.8480357588837116 1.1219777258146872 1.0884847331743297 0.9971169849016888 1.068457695124074 0.9822891936143253 0.9619566954190674 1.0 11.361886780074563 -6.747814753842174 24.99996268408528 1.012757245048148 0.9242073389839665 0.40108978282759133 0.06079471329390884 228.40794677842607 419105.54166402546 0.009026335383902987 0.01870908079595557 1.7872497548093678e-07 6.747814753842174 -0.08854990606418145 YLMAS(ph)DPNLQVLGAAYIQHK ddPTM_A549_PD325901_60min_R1 1 YLMASDPNLQVLGAAYIQHK 20 0 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 Y(0.015)LMAS(0.985)DPNLQVLGAAYIQHK 65.207 0.00041617 4886900.0 1808.0 2322.5 2968.7 2647.9 3243.2 3814.7 3074.3 3738.1 3464.1 3057.2 3633.4 True False 1991.546829020747 2518.2252258144586 3170.1738342433223 2811.45476918278 3015.4088204326035 3783.6343479597517 3191.294168821509 3663.54066301728 3318.5159237322455 2864.1678702549825 3186.5148340202854 0.6249921725636846 0.7902756952294883 0.9948718268615915 0.8822977188641208 0.9463030858162349 1.1873895290128327 1.001499862718415 1.149701430510886 1.0414249098427764 0.8988402751734214 1.0 11.637763661532555 -4.7849136124450125 0.7142131788595374 1.03571601674191 0.029726873372446533 0.6747433180421414 0.08592625459039124 1.815319413511107 0.4054720573958002 0.01200324838041074 1.7228735700446116 1.640916143074891e-05 4.7849136124450125 -1.0059891433694634 YLMEEDEDAYKK ddPTM_A549_MK2206_60min_R1 1 YLMEEDEDAYKK 12 1 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 59.57 0.007090300000000001 3928800.0 2664.9 3330.3 3297.5 3493.3 4546.2 3314.1 3616.7 3465.3 4881.1 4732.9 4333.9 False True 3114.669969450362 3499.7980451385993 3765.1350841358926 4349.1586568201965 3877.4600023147223 3664.7958622784654 4273.807574676914 3956.5168870361695 3775.5386435150144 3663.7346028581933 3257.6730204449486 0.956102699657974 1.0743245326262303 1.1557744010851134 1.335050703224404 1.1902545092708905 1.124973513080791 1.311920363969855 1.2145224097708154 1.158967956519876 1.1246477408459437 1.0 11.669626089429105 -10.325304850877114 0.8565949686313146 1.0064456027285325 1.174449456985522 0.09596848942386194 0.10472613585454858 0.5777909955646325 0.8094218551082693 0.05517263551509129 0.019803058125931854 4.728192493005903e-11 10.325304850877114 0.1680038542569895 YLMEEDEDAYKK ddPTM_A549_PD325901_60min_R1 2 YLMEEDEDAYKK 12 1 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 ; 77.124 0.00080152 14047000.0 6842.9 7238.6 5915.6 7113.7 9145.2 9042.0 8117.3 8202.3 9465.9 7184.200000000001 8415.1 False True 7537.586170523272 7848.622225868905 6317.068189392593 7553.097092615109 8502.872701227256 8968.364949865543 8426.208293456992 8038.698691920132 9068.081141553965 6730.5883859367605 7380.096047714022 1.0213398473124253 1.0634851057663415 0.8559601594005405 1.0234415709202964 1.1521357779430272 1.2152097874991052 1.1417477820044093 1.0892403892778755 1.2287212907429295 0.9119919771263078 1.0 12.849423876917815 -6.6248093906353835 5.205351561384169 1.122020632517866 0.9812878023801411 0.23605105957824635 0.09803847018079596 0.19875488731501653 8.49826088347478 0.013907143475901764 0.029417301266559566 2.3724147164506208e-07 6.6248093906353835 -0.14073283013772497 YLNAGAGGIAGAFIHEK ddPTM_A549_MK2206_60min_R1 1 YLNAGAGGIAGAFIHEK 17 0 Q16719-2;Q16719 Q16719-2 KYNU Kynureninase 0 89.484 7.066900000000001e-06 1000400.0 927.15 1050.0 1056.0 985.26 1389.8 1461.7 1109.0 1084.8 1802.9 1280.3 1323.4 False True 1083.6302533588134 1103.4405150873888 1205.756678952996 1226.6487442300024 1185.3622610569275 1616.3761238020668 1310.4909448714836 1238.573722060669 1394.546028639695 991.0793407930323 994.7632560181005 1.0893348209265743 1.1092493700504262 1.2121041581084055 1.233106205731912 1.1916023776368343 1.6248852317607674 1.3173897778625212 1.2450939603645073 1.4018873538030239 0.9962966914964125 1.0 9.95820940889017 -5.784285471981228 2.541824957051255 1.2401157266612115 1.0882656496500849 0.10774505992714423 0.16507713379264036 0.622011628674592 7.82244021019303 0.026576422482801437 0.12720477439014966 1.6432911941592475e-06 5.784285471981228 -0.15185007701112663 YLNAGAGGIAGAFIHEK ddPTM_A549_PD325901_60min_R1 2 YLNAGAGGIAGAFIHEK 17 0 Q16719-2;Q16719 Q16719-2 KYNU Kynureninase 0 ; 125.52 2.3305000000000004e-10 5043200.0 3145.8 3000.1000000000004 2961.1000000000004 3464.3 4094.7 3636.5 3093.3999999999996 3467.6000000000004 3968.3999999999996 3254.2 3669.4 False True 3465.159300184437 3252.928955851867 3162.0580525408072 3678.281943003855 3807.1023979481306 3606.8855496777314 3211.1210297734306 3398.4359977204244 3801.6219484827348 3048.7292566347523 3218.087062243089 1.0767761198384522 1.0108268958964997 0.9825893431039656 1.1430026198358967 1.1830327534067655 1.120816646633432 0.9978353499035533 1.0560422797733844 1.1813297387401656 0.9473731436307724 1.0 11.651987641974934 -6.255358238628187 24.861468113365397 1.0914973441136753 1.0221404010374522 0.07733579221784581 0.07616461389258404 760.3366271209773 3108468.7101044054 0.011133343847990395 0.02862080151760039 5.554458948597013e-07 6.255358238628187 -0.06935694307622309 YLPHSAGR ddPTM_A549_MK2206_60min_R1 2 YLPHSAGR 8 0 M0R0F0;M0R0R2;P46782 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 0 ; 92.491 0.0027773000000000003 17023500.0 681.36 619.5 620.5999999999999 476.772 816.52 784.05 597.1700000000001 643.83 877.72 987.18 969.57 False True 796.3569103473674 651.0299039015597 708.6104118922617 593.5811614031082 696.4109896375037 867.0176505897314 705.6680591063157 735.094874146682 678.9178214308249 764.1753523737135 728.799010229311 1.092697573912456 0.8932914215905948 0.9722988120816779 0.8144648292213549 0.9555597357608696 1.1896526181023914 0.9682615497574327 1.0086386834079124 0.9315570025502761 1.0485406012465244 1.0 9.509377189614147 -5.233082373255624 22.50043148463626 0.9700532107326325 1.0926982725392405 0.11265236594478778 0.08973203194369532 3700.390555254018 2935964.2759850654 0.011635998114997959 1.2361453898594708 5.8467917669102145e-06 5.233082373255624 0.12264506180660795 YLPHSAGR ddPTM_A549_PD325901_60min_R1 4 YLPHSAGR 8 0 M0R0F0;M0R0R2;P46782 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 0 ;;; 98.29899999999999 0.0026208000000000004 25520900.0 1864.12 1533.3 1557.87 1715.08 2074.31 1937.43 1599.1399999999999 1780.8500000000001 1968.2600000000002 1865.29 1906.05 False True 2053.3640901073873 1662.5165721168173 1663.5964264333352 1821.0165963707107 1928.6176215810162 1921.6522124328692 1659.9961477829845 1745.329549700202 1885.5408770085246 1747.5152710676173 1671.6179334464596 1.228369263707205 0.9945553579274676 0.9952013514256897 1.089373689965283 1.1537430790806888 1.149576212353083 0.9930475825660031 1.044095971201845 1.1279735873143029 1.0454035196096971 1.0 10.707029426034646 -11.011374266333835 1.2679986731077584 0.999564558949256 1.0858794413052555 0.0902848654659325 0.07349145001932328 0.7035039580923044 1.9971227392597368 0.052721626835626964 0.011699905180120953 9.741497730096413e-12 11.011374266333835 0.08631488235599949 YLQAHTQSVYNY(ph)HLSPR ddPTM_A549_MK2206_60min_R1 2 YLQAHTQSVYNYHLSPR 17 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 YLQAHTQSVYNY(0.966)HLS(0.034)PR;YLQAHTQSVYNY(0.5)HLS(0.499)PR 149.44 2.4e-17 27328900.0 1988.62 2354.13 2001.14 1775.33 2450.59 2277.78 1669.38 1981.42 3328.7 3001.1 3046.3999999999996 True False 2324.25043890892 2473.9451616977863 2284.931742916665 2210.2859296975907 2090.1114572769443 2518.8131677320043 1972.684737195274 2262.2923528442566 2574.7547648416194 2323.149425645528 2289.8948036372544 1.0150031500211691 1.0803750276074637 0.9978326250128582 0.9652347025665924 0.9127543562075535 1.0999689434340554 0.8614739568218915 0.9879459743088834 1.124398710697057 1.0145223361158129 1.0 11.161065607981326 -8.704763891736775 24.96024268747501 1.058743895573147 0.9893134010350768 0.106816829882725 0.06991698057707678 113.97895233150419 50196.68380408846 0.01257495172781039 0.014258649985723805 1.9734953537543842e-09 8.704763891736775 -0.06943049453807015 YLQAHTQSVYNYHLS(ph)PR ddPTM_A549_MK2206_60min_R1 6 YLQAHTQSVYNYHLSPR 17 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 YLQAHTQSVYNYHLS(1)PR;YLQAHTQSVYNYHLS(1)PR;YLQAHTQSVYNYHLS(1)PR;YLQAHTQSVYNY(0.017)HLS(0.983)PR;YLQAHTQSVYNYHLS(1)PR;YLQAHTQSVYNYHLS(1)PR 177.61 9.8733e-31 59834300.0 9558.84 10916.580000000002 10986.2 9467.439999999999 13326.070000000002 10130.82 9194.640000000001 9581.09 14052.199999999999 14924.83 15174.0 True False 11172.138500799621 11472.187293516854 12544.208358251326 11786.963225009536 11365.822755938183 11202.85664810594 10865.187070652071 10939.238848357527 10869.399136752307 11553.300537255387 11405.877018904841 0.9795071858378093 1.0058136936337387 1.0998021754451448 1.0334113900643553 0.9964882785514635 0.9822003717502475 0.9525954955189684 0.9590879184674815 0.9529647846225817 1.0129252242599316 1.0 13.47748976194514 -6.959352782237133 2.8594974259220085 0.9740238636083076 1.0327774198190744 0.36711288140275256 0.03227259630179947 0.20931145166131768 3.4876079717509336 0.004930216405528004 0.009729417732275928 1.09811346725887e-07 6.959352782237133 0.05875355621076683 YLQAHTQSVYNYHLS(ph)PR ddPTM_A549_PD325901_60min_R1 4 YLQAHTQSVYNYHLSPR 17 0 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 YLQAHTQS(0.001)VYNY(0.063)HLS(0.936)PR;YLQAHTQSVYNYHLS(1)PR;YLQAHTQSVYNY(0.018)HLS(0.982)PR;YLQAHTQSVYNYHLS(1)PR 189.47 4.6053e-40 32428500.0 3886.5199999999995 3987.71 4343.04 5239.42 5291.290000000001 5360.46 5616.44 6824.389999999999 7329.4 7338.71 7631.4 True False 4281.0766492951925 4323.7683165694625 4637.784811221113 5563.047073813833 4919.648044359533 5316.80619101485 5830.176697633895 6688.2721878196135 7021.370806675078 6875.342598167912 6692.7861794304035 0.6396553743869251 0.6460341329681387 0.6929527833228667 0.8312004783465653 0.7350672668252229 0.7944084942315223 0.8711135454397675 0.9993255437287593 1.0490953421244122 1.0272765951045286 1.0 12.708391208601789 -7.707144155259144 0.8608860457266224 1.0278336172936064 0.6835639674590736 0.9027389009567302 0.046362677910857165 0.12526559864431405 0.18702006375419156 0.009901550346851798 0.01823696912944475 1.9627086872956224e-08 7.707144155259144 -0.3442696498345329 YLS(ph)FHFK ddPTM_A549_MK2206_60min_R1 2 YLSFHFK 7 0 P53004 P53004 BLVRA Biliverdin reductase A 1 Y(0.005)LS(0.995)FHFK;YLS(1)FHFK 72.547 0.0060497 29544000.0 1829.34 2122.84 1794.47 1594.13 2440.2 2188.84 1923.65 2285.43 2816.3999999999996 2386.69 2679.1 True False 2138.0878689310375 2230.8834886172494 2048.9528292431637 1984.6919215632156 2081.249812513394 2420.4615959655994 2273.1523048710815 2609.3967013358338 2178.4898968666243 1847.535071371805 2013.8055306015517 1.0617151638730284 1.1077948961391786 1.0174531741558546 0.9855429888358488 1.033490960714412 1.2019341287848058 1.128784418519329 1.2957540644733312 1.08177769092524 0.9174346992779986 1.0 10.975708656396613 -4.925036926284787 18.156083436368736 1.069950480806399 0.8724455084565977 0.0 0.10126673983482913 21755.19199717171 765537.3905037818 0.013259677799081953 197143.06971526088 1.1884011782461191e-05 4.925036926284787 -0.19750497234980136 YLS(ph)FHFK ddPTM_A549_PD325901_60min_R1 3 YLSFHFK 7 0 P53004 P53004 BLVRA Biliverdin reductase A 1 Y(0.002)LS(0.998)FHFK;YLS(1)FHFK;Y(0.004)LS(0.996)FHFK 96.711 0.0060497 57778500.0 5413.799999999999 5566.0599999999995 6184.200000000001 6449.5 6656.6 6992.54 6782.6 6325.1 6936.400000000001 6749.5 6935.2 True False 5963.40499057108 6035.131410289266 6603.897000615602 6847.870967122753 6189.063380023335 6935.595072609248 7040.715554581137 6198.940918555041 6644.88722998076 6323.335418123127 6082.214365854982 0.980466098671088 0.9922589121767829 1.0857718264073855 1.1258845142923768 1.017567452861937 1.1403075681687693 1.1575908264771293 1.0191914565450622 1.092511185939873 1.0396436294027678 1.0 12.570380949288918 -5.710331726879896 7.6716533355602605 1.0627277619490767 0.9853103986640708 0.2853111176870148 0.05124787644891903 0.2824877454505705 35.63520816078806 0.007909270547351733 0.030712339529992933 1.9483558198478497e-06 5.710331726879896 -0.07741736328500592 YLS(ph)FTPPEK ddPTM_A549_MK2206_60min_R1 4 YLSFTPPEK 9 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 YLS(0.932)FT(0.068)PPEK;YLS(0.985)FT(0.015)PPEK;YLS(0.941)FT(0.059)PPEK;YLS(0.986)FT(0.014)PPEK 169.76 1.9303e-07 295349600.0 46442.1 47181.0 44298.3 40870.6 64873.2 56241.2 45936.9 50901.8 68299.2 62888.9 63593.6 True False 54280.3910796693 49582.3113736553 50580.46504854498 50883.89883475098 55330.438217008385 62192.60645411292 54283.04011313514 58117.28603022467 52829.54025141071 48682.25381176203 47801.554025927675 1.1355361177217689 1.0372531266820684 1.0581343238571286 1.0644821046435318 1.157502916892556 1.3010582547249303 1.1355915350302606 1.2158032769960097 1.1051845766929638 1.0184240827266131 1.0 15.544769900455378 -10.014675498368627 0.965676369514132 1.0121283749058614 1.1340708515135187 0.30938518644937585 0.07165994440180641 0.46612947697499035 0.8782056870322337 0.02942994864065515 0.015079051678931404 9.667729748149635e-11 10.014675498368627 0.12194247660765734 YLS(ph)FTPPEK ddPTM_A549_PD325901_60min_R1 3 YLSFTPPEK 9 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 YLS(0.5)FT(0.5)PPEK;YLS(0.988)FT(0.012)PPEK;YLS(0.657)FT(0.343)PPEK 167.76 2.2780000000000001e-07 367721000.0 51111.2 56481.0 55605.0 54633.0 63663.0 54050.0 56980.0 56919.0 58050.0 57560.0 61040.0 True False 56299.9713979232 61240.85209008674 59378.68968002828 58007.556329454594 59191.530505427014 53609.83472022039 59148.405080652374 55783.70589290829 55610.36037431279 53925.651776748935 53532.46696444054 1.051697681620408 1.1439945805368277 1.1092089165154886 1.0835957993115968 1.1057127358756988 1.001445249213552 1.1049071420516128 1.0420537116281818 1.0388155735705682 1.0073447915742344 1.0 15.708126518198167 -8.226106371752621 0.2979984254450686 0.9953028806481886 1.118314851252206 0.4970476214628362 0.0336095780635244 0.834135126160684 0.2149994166632123 0.025234282809133486 0.036424857001514 5.941466164546393e-09 8.226106371752621 0.12301197060401747 YLS(ph)FTPPEKDGFPSGTPALNAK ddPTM_A549_MK2206_60min_R1 2 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 YLS(0.987)FT(0.013)PPEKDGFPSGTPALNAK;YLS(0.998)FT(0.002)PPEKDGFPSGTPALNAK 272.91 1.0364999999999998e-124 694580000.0 36302.0 41188.0 41754.0 37954.0 53149.0 42321.0 36758.0 39245.0 62594.0 61651.0 59287.0 True False 42428.890101312274 43284.293271827984 47675.3450501926 47252.731703819794 45330.852506054594 46799.3801295938 43436.45279674122 44808.098932771856 48416.5589420784 47723.996281520915 44564.40166204109 0.9520803268733709 0.971275090824265 1.0698078123373826 1.0603246075682995 1.0171987239910898 1.0501516543294334 0.9746894646122752 1.005468429096813 1.0864402333784386 1.0708995184865477 1.0 15.443604115422593 -5.642054497131096 6.057214457507923 1.0365360863860613 0.9571376950288486 0.4387840242995603 0.03315579077436562 0.1564084592499819 7.496577618854797 0.005262234096529477 0.021027423868284337 2.280055942866274e-06 5.642054497131096 -0.07939839135721272 YLS(ph)FTPPEKDGFPSGTPALNAK ddPTM_A549_PD325901_60min_R1 3 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 YLS(0.999)FT(0.001)PPEKDGFPSGTPALNAK;YLS(0.967)FT(0.033)PPEKDGFPSGTPALNAK;YLS(0.999)FT(0.001)PPEKDGFPSGTPALNAK 290.66 1.3281999999999996e-156 1256051900.0 65552.4 68111.1 72490.1 77856.9 84626.3 82805.1 82587.9 87000.1 82979.2 82818.3 86717.3 True False 72207.23139087384 73851.06143292626 77409.71410438306 82665.94388715095 78682.44063288596 82130.76271954339 85730.827728333 85264.81475524181 79491.87279194103 77589.13840414048 76051.6218462562 0.9494502502109151 0.9710649114389891 1.0178575055358103 1.0869714791127805 1.0345925402083884 1.0799344014724184 1.1272715248814025 1.1211439373063041 1.045235734125954 1.020216749104871 1.0 16.21469139416065 -5.802577911643144 2.9572867593435883 1.045296482582448 0.9550595979505166 0.4505778583544532 0.04088950245801428 0.23729526384566932 4.119429217108613 0.007002654174458566 0.029755021786975453 1.575513353148633e-06 5.802577911643144 -0.09023688463193136 YLS(ph)LPK ddPTM_A549_MK2206_60min_R1 1 YLSLPK 6 0 Q9UBY0 Q9UBY0 SLC9A2 Sodium/hydrogen exchanger 2 1 Y(0.001)LS(0.999)LPK 78.49600000000001 0.043997 6643100.0 2863.2 3138.8 2726.9 2546.0 3980.6 3395.4 2943.3 2989.5 4568.6 4279.8 4739.5 True False 3346.4381614808344 3298.551513101233 3113.6154240879964 3169.7701142942815 3395.059013068934 3754.698974315892 3478.059511307701 3413.2707799597774 3533.8193945550597 3312.9902075498103 3562.551346454427 0.939337524162655 0.925895851686198 0.8739847152481811 0.8897472081206479 0.952985285797442 1.053935398868762 0.976283335472255 0.9580972870346925 0.9919350069359808 0.9299487601342256 1.0 11.79869509229808 -6.984518226980999 5.788519383410957 0.9952528110070649 0.9073595344622412 0.5301934935086288 0.03343243744900711 0.06976518888635716 7.997494609964371 0.003913282138954962 0.007317178079877048 1.0362911112356346e-07 6.984518226980999 -0.0878932765448237 YLS(ph)LPK ddPTM_A549_PD325901_60min_R1 3 YLSLPK 6 0 Q9UBY0 Q9UBY0 SLC9A2 Sodium/hydrogen exchanger 2 1 YLS(1)LPK;Y(0.001)LS(0.999)LPK;Y(0.001)LS(0.999)LPK 78.49600000000001 0.043997 22769300.0 6801.400000000001 7727.700000000001 7933.9 7776.1 9399.0 7618.5 9005.3 8545.7 8508.1 8582.5 9510.2 True False 7491.873121073958 8378.94039936551 8472.342164416445 8256.412036195556 8738.846664789726 7556.457461905625 9348.001619389246 8375.249309528044 8150.534144714739 8040.599485301389 8340.505690124879 0.8982516647574861 1.0046081989112647 1.0158067722977109 0.9899174394151077 1.0477598109112833 0.9059951209975716 1.1207955448621345 1.00416564902585 0.9772230183075032 0.9640422036785399 1.0 13.02591914249488 -5.259470649377846 24.169420645374633 0.9990875052892547 0.898251610796908 0.25992416328082957 0.05042995495562694 107.58079943815105 1320564.9913966255 0.006070943099113174 0.05474780245049322 5.502111037888887e-06 5.259470649377846 -0.10083589449234676 YLS(ph)PER ddPTM_A549_PD325901_60min_R1 1 YLSPER 6 0 K7ESL7;C9JRL6;O95834-2;O95834-3 K7ESL7 EML2 1 YLS(1)PER 113.5 0.020968 36023000.0 5351.7 6656.4 6156.6 5589.7 6752.6 6621.4 6492.8 6596.8 6693.2 6808.3 6823.4 True False 5895.000644286687 7217.358188637833 6574.423898643323 5934.96307387023 6278.320671205354 6567.47751371817 6739.887056996484 6465.221648910512 6411.908080229976 6378.422776088252 5984.1650570963875 0.9850999409342889 1.206076055686173 1.09863679158498 0.9917779702336568 1.04915566521016 1.0974759972454393 1.1262869577776629 1.080388255876007 1.0714791485616435 1.0658834967334883 1.0 12.546934253298456 -10.320011357664665 0.6983682779478709 0.9990273915707504 1.0821387310135477 0.03760211616163922 0.060652966586673414 0.8817280373475577 0.7832779987593237 0.03919055213659723 0.01177926805753428 4.786175753572343e-11 10.320011357664665 0.08311133944279736 YLS(ph)PLGK ddPTM_A549_MK2206_60min_R1 4 YLSPLGK 7 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 Y(0.078)LS(0.922)PLGK;Y(0.007)LS(0.993)PLGK;Y(0.021)LS(0.979)PLGK;Y(0.005)LS(0.995)PLGK 82.279 0.015034 50802300.0 7632.9 8252.6 8580.2 7774.799999999999 9959.2 8440.099999999999 7563.200000000001 8292.400000000001 11694.4 11672.2 11655.2 True False 8921.146913511828 8672.62209029541 9797.001379500462 9679.626349024029 8494.214872872468 9333.225779915048 8937.335540353486 9467.873094409928 9045.637072119389 9035.441913305032 8760.89217284432 1.0182920571907323 0.9899245327065529 1.1182652618266111 1.104867650240858 0.9695604859972529 1.0653282332186167 1.0201398857591328 1.0806973659323191 1.0325018153011492 1.0313381029059712 1.0 13.096862080036223 -9.929939425988335 0.7930458228448685 1.0025475969498354 1.0457619529464424 0.04431630384468421 0.044399240024588366 0.8910739952727162 1.146519271108846 0.018750814083614124 0.008981538226757539 1.175061437338582e-10 9.929939425988335 0.043214355996606946 YLS(ph)PLGK ddPTM_A549_PD325901_60min_R1 2 YLSPLGK 7 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 Y(0.353)LS(0.647)PLGK;Y(0.03)LS(0.97)PLGK 63.419 0.026542000000000003 88167000.0 2503.1 2825.6 2565.5699999999997 2884.4 3279.3 3015.7 2999.9 2730.3999999999996 3322.7 2943.0 3343.2 True False 2757.212869315172 3063.723228444063 2739.6850082257015 3062.5628370523104 3048.9732809708435 2991.1411390521484 3114.0628361082686 2675.9400300426364 3183.0584740004997 2757.178477744478 2932.007594290917 0.9403839453499037 1.0449233605020727 0.9344058363151249 1.0445275936582175 1.039892695676395 1.02016827817103 1.0620923500238684 0.9126647677356345 1.0856242255983302 0.9403722156494891 1.0 11.51767312491132 -6.289018282614015 24.496216760606494 1.032394487508319 0.9804062610657294 0.010152735525871814 0.05704963905759653 729.1396726075895 647637.2353676185 0.007164084708664456 0.016652239419238504 5.140220122012069e-07 6.289018282614015 -0.05198822644258971 YLSFT(ph)PPEK ddPTM_A549_PD325901_60min_R1 1 YLSFTPPEK 9 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 YLS(0.422)FT(0.578)PPEK 166.34 1.6139e-06 54887000.0 11884.0 11800.0 13386.0 12298.0 14929.0 13516.0 13571.0 13806.0 14401.0 14141.0 16504.0 True False 13090.454931461596 12794.427412103601 14294.454456557114 13057.619529215537 13880.438542254054 13405.93017721552 14087.451831336146 13530.628499402519 13795.776050826502 13248.134846681836 14474.112627475864 0.904404661506661 0.883952456457762 0.9875876210485118 0.902136100863867 0.9589837318182219 0.9262004878811956 0.9732860448103927 0.934815753313792 0.9531344964552996 0.9152985877374766 1.0 13.821187282362759 YLSFTPPEKDGFPSGTPALNAK ddPTM_A549_MK2206_60min_R1 1 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 0 116.39 6.0871e-15 3616200.0 2295.7 2960.3 2650.5 2313.6 3510.0 2617.9 2176.9 2339.2 4301.0 3602.6 3778.6 False True 2683.1580355237343 3110.9666255363786 3026.380755269803 2880.4321038614507 2993.6836496688834 2894.924440378623 2572.414551749987 2670.788763499554 3326.8303672856673 2788.770157885635 2840.2693359452896 0.9446843655166013 1.0953069084559182 1.0655259756422264 1.0141404786538648 1.0540140020462303 1.0192429301480816 0.9056938788144343 0.9403294010533232 1.1713080605359005 0.9818682061564014 1.0 11.471812028197839 -8.750602874690047 24.999739257457968 1.0808954785405926 1.0090246120439057 0.03145313518092463 0.07189168086408942 316.3881802838719 729904.6356952441 0.01385177741823331 0.0156316376250124 1.7758125680171227e-09 8.750602874690047 -0.07187086649668695 YLSGS(ph)GR ddPTM_A549_MK2206_60min_R1 1 YLSGSGR 7 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 YLS(0.111)GS(0.889)GR 88.954 0.012718 14719000.0 4416.3 5171.5 4570.2 4911.9 6729.2 4575.1 4742.4 5086.2 6595.8 6725.1 7357.0 True False 5161.663471831452 5434.707260737552 5218.323081582368 6115.315720503573 5739.343594117341 5059.234045294406 5604.032693380099 5807.184425834232 5101.861831328251 5205.895239215203 5530.053857129493 0.933383942577141 0.9827584687499893 0.9436297035072754 1.105832940961243 1.037845876802452 0.9148616226896067 1.0133775977887143 1.0501135388306309 0.9225700080209518 0.9413823759607014 1.0 12.433077815580528 -8.772988190129473 24.99899083346751 0.9634358444748481 0.9981239144589467 0.10106211932545273 0.05554488050917457 479.4962960965643 1037932.915862435 0.010190031330269456 0.010891383680065796 1.6865988888397323e-09 8.772988190129473 0.03468806998409857 YLSHSEFK ddPTM_A549_PD325901_60min_R1 1 YLSHSEFK 8 0 Q92616 Q92616 GCN1L1 Translational activator GCN1 0 54.157 0.025301 571110.0 1512.0 1514.8 1894.0 1593.6 1901.9 1871.9 1938.4 1980.1 1916.1 2042.9 1841.0 False True 1665.4971269244293 1642.4575121910632 2022.5382295472261 1692.0330526718064 1768.317105198806 1856.655867026466 2012.16687273318 1940.6053521416 1835.5729804172383 1913.9109453565047 1614.5686710605344 1.0315430720146714 1.0172732455611255 1.2526802147218152 1.047978375277398 1.0952257013864153 1.149939237831808 1.2462566063613028 1.2019342298193532 1.1368813314156136 1.185400769667695 1.0 10.65693308782618 -10.522964015044527 0.965887840914528 1.0044781535192753 1.1324807528223602 0.0 0.09345115694570019 0.5436455063727872 0.9508338938825388 0.04408353220477223 0.014330258081450543 2.999411035157112e-11 10.522964015044527 0.12800259930308489 YLSPGWGS(ph)ASEEEPSR ddPTM_A549_MK2206_60min_R1 2 YLSPGWGSASEEEPSR 16 0 Q9BRS8;H0YMC6;Q9BRS8-2 Q9BRS8 LARP6 La-related protein 6 1 YLSPGWGS(0.995)AS(0.005)EEEPSR;YLSPGWGS(0.999)AS(0.001)EEEPSR 154.69 3.6753e-20 11764400.0 4457.0 4112.7 3533.2 3501.8999999999996 5847.9 5053.0 4959.7 3705.3 7368.099999999999 6176.5 6748.9 True False 5209.232636811986 4322.018863238006 4034.260888330228 4359.8656572062655 4987.681656666289 5587.70510609006 5860.813290603334 4230.537622005341 5699.237114437925 4781.224360234449 5072.961869835694 1.0268621705569225 0.8519714861129026 0.7952476268978722 0.859431978610057 0.9831892658849873 1.1014679884181817 1.1553040296739225 0.8339383836414213 1.1234535682844615 0.9424916809771537 1.0 12.30861260136893 -6.929549561932819 3.918711722055191 1.0516075642435518 0.8755554053350597 0.28706882300625525 0.10037098821639916 0.1690080381664603 5.188123620010812 0.014041880606882402 0.027229846804955108 1.1761167579137692e-07 6.929549561932819 -0.17605215890849213 YLSPGWGS(ph)ASEEEPSR ddPTM_A549_PD325901_60min_R1 1 YLSPGWGSASEEEPSR 16 0 Q9BRS8;H0YMC6;Q9BRS8-2 Q9BRS8 LARP6 La-related protein 6 1 YLS(0.04)PGWGS(0.754)AS(0.206)EEEPSR 64.52 0.0026261 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YLSVPPS(ph)PNISTSESR ddPTM_A549_MK2206_60min_R1 2 YLSVPPSPNISTSESR 16 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.991)PNIS(0.003)T(0.003)S(0.003)ES(0.001)R;YLS(0.001)VPPS(0.661)PNIS(0.104)T(0.104)S(0.104)ES(0.025)R 86.214 3.861e-05 3534500.0 2877.9 3800.7 3438.5 3302.8 5621.0 3927.7999999999997 3524.8 3747.7 5766.5 5197.8 5934.6 True False 3363.619162100341 3994.139395897753 3926.1310043370045 4111.986148268325 4794.158346093672 4343.437188937374 4165.2105342497825 4278.947951849896 4460.396957208275 4023.61336997112 4460.875033372393 0.7540267631208369 0.8953712816470021 0.8801257544685969 0.9217891372221854 1.07471254187305 0.9736738098340683 0.9337205151655885 0.9592171759662674 0.9998928290614417 0.9019784997046407 1.0 12.123111017786083 -4.05041743971758 0.5461871983613499 0.9958116154071756 1.4567139967837357e-10 0.6025741809637901 0.04979501416442152 4.275575675983777 0.31886007411630474 0.0072904060713533106 3.673636331599878 8.903946878005634e-05 4.05041743971758 -0.9958116152615042 YLSVPPS(ph)PNISTSESR ddPTM_A549_PD325901_60min_R1 1 YLSVPPSPNISTSESR 16 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.949)PNIS(0.014)T(0.014)S(0.014)ES(0.007)R 73.833 0.00057212 4103400.0 2107.7 1891.0 2641.2 2449.0 3348.4 2569.7 2773.8 2504.7 3252.2 2834.4 3043.0 True False 2321.672152393267 2050.3612064650774 2820.447714825835 2600.2691679174563 3113.2199353529018 2548.7732151813193 2879.3584768815995 2454.7417936008615 3115.521343830148 2655.4355002782704 2668.7302911663264 0.8699538353793769 0.7682909034501945 1.0568500399466005 0.9743469306450784 1.1665547266645362 0.9550508807944839 1.0789244931990567 0.919816364256148 1.16741708749765 0.9950183085446803 1.0 11.38193779499087 -5.769342711538953 24.82298123622597 1.0593805376434502 0.8191223595911046 0.4889593057826913 0.08200685093478435 78.36016772942537 246119.2962527382 0.011752921657381472 0.03752080664580434 1.7008158266899421e-06 5.769342711538953 -0.24025817805234562 YLSVPPSPNIS(ph)TSESRSPPEGDTTLFLSR ddPTM_A549_MK2206_60min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.003)PNIS(0.207)T(0.207)S(0.207)ES(0.207)RS(0.167)PPEGDTTLFLSR 75.53399999999999 2.9060000000000002e-06 9333200.0 1629.3 1753.2 1761.0 1440.8 2056.4 2074.9 1944.3 1279.4 2344.5 2579.7 2733.8 True False 1904.2860074394805 1842.4303914773427 2010.7362799585458 1793.7960646799693 1753.9062840966071 2294.464540792849 2297.5541425731517 1460.758867998175 1813.4744933971733 1996.9439783205382 2054.922010958354 0.9266950265189766 0.8965938277229745 0.9784976117029369 0.8729265904565384 0.8535147683189387 1.116570131886796 1.1180736448005837 0.7108585436373427 0.8825028316045062 0.9717857746772703 1.0 11.004867925995473 YLSVPPSPNISTS(ph)ESRSPPEGDTTLFLSR ddPTM_A549_PD325901_60min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLS(0.001)VPPS(0.211)PNIS(0.211)T(0.211)S(0.314)ES(0.025)RS(0.025)PPEGDTTLFLSR 206.83 9.703999999999998e-79 25911000.0 4868.7 4945.6 5039.9 5369.5 5462.9 6645.7 5374.5 5439.1 6565.4 5488.9 5960.9 True False 5362.966839852492 5362.383068584711 5381.937921380708 5701.161819980715 5079.204749981894 6591.579622574812 5579.029538539246 5330.612883608597 6289.479069793511 5142.329917258468 5227.747089258417 1.0258657789455643 1.0257541110974808 1.0294947000093235 1.0905580783919397 0.9715857831795771 1.2608834188093558 1.0671957620143135 1.0196768880731704 1.2030955136901442 0.9836608063585445 1.0 12.351973632012239 YLSVPPSPNISTSESRS(ph)PPEGDTTLFLSR ddPTM_A549_MK2206_60min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPSPNIS(0.01)T(0.01)S(0.01)ES(0.04)RS(0.929)PPEGDTTLFLSR 100.33 7.1395e-15 7996600.0 1686.8 2309.5 1956.7 1762.8 2287.4 1905.7 1813.6 2060.3 2719.9 2430.9 2930.4 True False 1971.4906016994519 2427.0436853279284 2234.189482677392 2194.686079135098 1950.9264901004567 2107.359909098719 2143.107644381355 2352.3538344041267 2103.8469927877914 1881.758001666628 2202.7008050743875 0.8950333141739931 1.101849002704643 1.014295485583182 0.9963614096291127 0.8856974517855919 0.9567163657651414 0.9729454129422629 1.0679406976131218 0.9551215434893084 0.8542957796772036 1.0 11.105057830381943 -6.526994625968416 24.984680789645488 0.9763286871217631 1.0121699556646018 0.04034321459250434 0.07050004358930553 253.09842904531197 1536385.957943067 0.008200210828299161 0.01713365259646573 2.9717028038513833e-07 6.526994625968416 0.035841268542838645 YLSVPPSPNISTSESRS(ph)PPEGDTTLFLSR ddPTM_A549_PD325901_60min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPSPNISTSES(0.023)RS(0.977)PPEGDTTLFLSR 190.14 2.6895999999999995e-67 22792000.0 3881.7 4598.1 4583.4 4876.9 5004.4 4664.5 5343.2 4700.8 4858.3 4804.3 5447.3 True False 4275.76732644349 4985.598024033356 4894.457086223207 5178.135036756486 4652.90820824276 4626.5138585100485 5546.538399911226 4607.038856293738 4654.12254619335 4500.955678093031 4777.316633279771 0.8950144306235879 1.0435979874774584 1.024520135870294 1.0839003219264414 0.9739585138296348 0.9684335817895764 1.1610154456317379 0.9643570250713878 0.974212702120637 0.9421514259152193 1.0 12.221984784273022 YLTASQLVPPDNQDT(ph)RSNLDITVGSR ddPTM_A549_MK2206_60min_R1 1 YLTASQLVPPDNQDTRSNLDITVGSR 26 1 P42356;P42356-2 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 YLTASQLVPPDNQDT(0.405)RS(0.33)NLDIT(0.093)VGS(0.172)R 85.412 3.2975e-07 6108400.0 748.78 812.58 961.29 997.2 1437.5 976.32 1235.1 1020.3 1354.5 1397.5 1497.0 True False 875.1557580866232 853.9368511902001 1097.6153768093982 1241.5140447660099 1226.0456542447346 1079.6335343712344 1459.5016826066455 1164.930649537703 1047.7079126920332 1081.8037793940975 1125.2535849018411 0.7777409197616246 0.7588839197208078 0.9754382403546362 1.1033193419013283 1.0895727600385168 0.9594579825003745 1.2970424641961587 1.0352605538593533 0.9310860474027529 0.9613866544477316 1.0 10.136034445619162 -5.8024408417869395 4.925093230979191 1.0113351365542966 0.7660534764168404 0.5108140414922993 0.09960323323151954 0.12456345693243688 6.8292249137799255 0.014828234911717598 0.05120000184639979 1.5760106872864853e-06 5.8024408417869395 -0.24528166013745623 YLTASQLVPPDNQDT(ph)RSNLDITVGSR ddPTM_A549_PD325901_60min_R1 2 YLTASQLVPPDNQDTRSNLDITVGSR 26 1 P42356;P42356-2 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 YLTASQLVPPDNQDT(0.533)RS(0.41)NLDIT(0.018)VGS(0.038)R;YLTASQLVPPDNQDT(0.54)RS(0.425)NLDIT(0.013)VGS(0.022)R 124.9 4.261e-18 22698000.0 2879.0 2873.5 3047.4 3562.9 2964.7 2515.2 2451.2 3427.7 2807.8 3289.6 3396.7999999999997 True False 3171.27396059222 3115.659929549127 3254.214889504868 3782.9722410670047 2756.4696996597636 2494.7170451119027 2544.481757348108 3359.331834521368 2689.7979303875195 3081.894094593351 2979.0151340893117 1.064537713925271 1.0458691175805617 1.0923794418720485 1.269873455081813 0.9252956348281257 0.8374301347329478 0.8541352234942435 1.1276652461681165 0.9029151613255546 1.0345345544998346 1.0 11.54061973749429 -6.803099849267399 24.999978361157083 0.9481784513264884 1.111159528152072 0.4083228731172426 0.0943973197884074 106.43472967108885 63869.9737589863 0.013405936846847226 0.02533499694329343 1.5736210294043236e-07 6.803099849267399 0.16298107682558372 YLTASQLVPPDNQDTRS(ph)NLDITVGSR ddPTM_A549_MK2206_60min_R1 1 YLTASQLVPPDNQDTRSNLDITVGSR 26 1 P42356;P42356-2 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 YLTASQLVPPDNQDT(0.136)RS(0.859)NLDIT(0.004)VGS(0.001)R 126.05 1.434e-18 6628700.0 639.95 897.86 1099.7 698.81 1373.7 717.3 723.91 930.75 1262.2 1426.5 1391.3 True False 747.9579147246644 943.5572389298692 1255.6539960649702 870.0184813707725 1171.630549729386 793.2042098947959 855.4350765571836 1062.6866628023297 976.3137153192215 1104.252659252723 1045.8018120734343 0.7152004386392707 0.9022333180501453 1.2006615226411563 0.8319152551914697 1.1203179571916024 0.7584651324347662 0.8179705434447234 1.0161453638098208 0.9335551956862229 1.0558909408116273 1.0 10.030393759736771 -10.340164394032664 0.6396408357811023 1.0022685383686543 0.9256287573164824 0.07031051869394378 0.14087253660103116 2.700072340331802 1.9455394339530294 0.10769738317406079 0.029307176393903303 4.569152001945781e-11 10.340164394032664 -0.07663978105217184 YLVDGTKPNAGSEEISS(ph)EDDELVEEK ddPTM_A549_PD325901_60min_R1 1 YLVDGTKPNAGSEEISSEDDELVEEK 26 1 Q9NY61 Q9NY61 AATF Protein AATF 1 YLVDGTKPNAGSEEIS(0.04)S(0.96)EDDELVEEK 127.14 3.3532e-24 4731700.0 1425.1 1628.9 1516.5 1590.6 1873.9 1853.4 1375.0 1183.3 1662.8 1802.9 1851.8 True False 1569.7751028968294 1766.173119625048 1619.4188094553163 1688.8477494853005 1742.2837286040499 1838.3065248928112 1427.3263774288696 1159.6981532191073 1592.9182985427615 1689.0645863151606 1624.040339527376 0.9665862754084429 1.087518010875909 0.9971543009372509 1.0399050493886035 1.072808160116937 1.1319340290696167 0.8788737217230985 0.7140821105198653 0.9808366576696785 1.0400385662875269 1.0 10.665371752722926 -7.762799008794243 24.999997204168668 0.9579093095361927 1.049322857755532 0.28686260600045055 0.09206296949232194 50.8867060152347 935686.1229510648 0.015138181458549647 0.021545418599676295 1.726636793503362e-08 7.762799008794243 0.09141354821933934 YLVLDEADR ddPTM_A549_MK2206_60min_R1 2 YLVLDEADR 9 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8Y7T2;D6RCM4;Q9NQI0-3;Q9NQI0-2;Q9NQI0-4;Q9NQI0;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX4;DDX3Y ATP-dependent RNA helicase DDX3X;Probable ATP-dependent RNA helicase DDX4;ATP-dependent RNA helicase DDX3Y 0 ; 101.64 0.0020085999999999997 2923540.0 1358.65 1569.69 1259.05 1106.42 1812.7 1297.3000000000002 1242.84 1403.77 1875.81 1860.48 1995.38 False True 1587.9569041966815 1649.5805163119273 1437.602222192963 1377.4929496690818 1546.0542312691705 1434.579424921955 1468.6479404184624 1602.7586963653262 1450.9420300530405 1440.1962758405234 1499.872076313584 1.058728227076268 1.0998141390606455 0.958483223266834 0.9184069571151107 1.0307907292127831 0.9564678532104507 0.979182134004478 1.0685969301492824 0.9673771870059713 0.9602127398626334 1.0 10.550623743557844 -5.7592215296151625 24.99999967894925 0.9850336228730513 1.0792712050064242 0.47360673670710296 0.03938928393976077 34.513915576283736 389019.7958764049 0.005108085728126439 0.018032725009186894 1.740918620312474e-06 5.7592215296151625 0.09423758213337285 YLVLDEADR ddPTM_A549_PD325901_60min_R1 1 YLVLDEADR 9 0 A0A2R8Y645;A0A2U3TZJ9;O00571;O00571-2;A0A0D9SG12;A0A2R8YF78;A0A0D9SF53;A0A0D9SFB3;F6S8Q4;A0A2R8YDH3;A0A2R8Y7T2;D6RCM4;Q9NQI0-3;Q9NQI0-2;Q9NQI0-4;Q9NQI0;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;O15523-2;O15523 A0A2R8Y645;A0A2R8Y5G6;O15523-2 DDX3X;DDX4;DDX3Y ATP-dependent RNA helicase DDX3X;Probable ATP-dependent RNA helicase DDX4;ATP-dependent RNA helicase DDX3Y 0 117.81 0.00048154 2512700.0 1267.6 1243.3 1343.1 1116.6 1502.8 1198.8 1063.2 1748.4 1559.2 1313.8 1535.8 False True 1396.2858188422006 1348.0772543617293 1434.2508427164096 1185.5698460174071 1397.2485123785516 1189.0373702608729 1103.6606578053638 1713.5267904067346 1493.6722462640566 1230.8464437854898 1346.9063362383329 1.0366614079058947 1.000869338937603 1.0648482408376028 0.8802169936541322 1.037376152138994 0.8827914297156255 0.8194041620501167 1.2721944683936277 1.1089651938497924 0.9138322470313879 1.0 10.39543381404971 -8.239616286770467 24.985849928539814 1.069448944833333 0.9627925307850573 0.20271167581616445 0.1080280635313448 998.9820549787127 1143763.2292759656 0.0163652185518858 0.021117744548924105 5.759485818131979e-09 8.239616286770467 -0.10665641404827575 YLYTLVITDKEK ddPTM_A549_MK2206_60min_R1 1 YLYTLVITDKEK 12 1 J3KT73;J3QL01;P63173 J3KT73 RPL38 60S ribosomal protein L38 0 105.65 0.00016096 2695400.0 1297.5 1883.5 1240.4 1478.5 2443.0 1778.6 1824.1 1950.6 2548.5 1656.0 2060.5 False True 1516.4862791706423 1979.3621049210437 1416.3073717550144 1840.7325663723877 2083.6379362225316 1966.8102714608729 2155.5153584671552 2227.103523461965 1971.2688191182328 1281.9084498580498 1548.8209830930166 0.9791230204940784 1.2779799128032412 0.9144422675154035 1.1884734171772517 1.3453058545613699 1.2698757912829448 1.39171368543998 1.4379347566782112 1.272754463321889 0.8276672797252922 1.0 10.596954687841246 -5.24353144988202 22.977941470793937 1.1864766083160314 0.9791224890038956 0.09505690823870772 0.18850528770071937 2296.2279364256133 2946180.071812451 0.024646411494101215 0.9422970186063789 5.707797410726476e-06 5.24353144988202 -0.20735411931213577 YMAENPTAGVVQEEEEDNLEYDS(ph)DGNPIAPTKK ddPTM_A549_MK2206_60min_R1 1 YMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKK 33 1 Q86XP3-2;Q86XP3;J3KRE3;A0A0A0MSJ0 Q86XP3-2 DDX42 ATP-dependent RNA helicase DDX42 1 YMAENPTAGVVQEEEEDNLEY(0.477)DS(0.522)DGNPIAPT(0.001)KK 66.083 0.00032215 9886100.0 563.5 839.78 477.5 627.24 912.76 721.26 785.16 491.71 1321.1 890.99 936.06 True False 658.6050237477126 882.5212150096075 545.2166801136888 780.9138281578737 778.4942131258605 797.5832544663602 927.8134087243418 561.41139829872 1021.8729593631939 689.71474018057 703.6104680582614 0.9360364202159338 1.2542752774060941 0.7748842646106608 1.1098666998416677 1.1064278439095059 1.133557970886126 1.3186463971816798 0.7979008610375494 1.452327680944308 0.9802508227087081 1.0 9.458633136631498 -6.934290934500224 1.7161779887951512 1.1882271688705943 1.0132813601156105 0.0 0.20158922901684745 0.6393315047105672 3.777805066624927 0.03310542960945983 0.07320143314814759 1.1633464408561644e-07 6.934290934500224 -0.17494580875498378 YMAENPTAGVVQEEEEDNLEYDS(ph)DGNPIAPTKK ddPTM_A549_PD325901_60min_R1 4 YMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKK 33 1 Q86XP3-2;Q86XP3;J3KRE3;A0A0A0MSJ0 Q86XP3-2 DDX42 ATP-dependent RNA helicase DDX42 1 YMAENPTAGVVQEEEEDNLEYDS(0.999)DGNPIAPT(0.001)KK;YMAENPTAGVVQEEEEDNLEY(0.014)DS(0.986)DGNPIAPTKK;YMAENPTAGVVQEEEEDNLEYDS(1)DGNPIAPTKK;YMAENPTAGVVQEEEEDNLEY(0.001)DS(0.998)DGNPIAPT(0.001)KK 149.68 9.523200000000001e-41 74293500.0 5283.4 5050.08 5801.3 5595.799999999999 6456.900000000001 6220.700000000001 6363.1 6155.7 5531.700000000001 6186.299999999999 6995.5 True False 5819.766878566493 5475.667964857302 6195.011104050857 5941.439857016122 6003.389619095733 6170.040681666509 6605.251252521922 6032.919734446766 5299.221886004925 5795.695962239435 6135.097848128177 0.9486021287080381 0.892515180752648 1.009765656132275 0.9684344087240369 0.9785320084059248 1.0056955625490134 1.0766333995043271 0.9833453163729758 0.8637550724022636 0.9446786515406117 1.0 12.58287063814824 -11.46740486443952 2.4047817127791093 1.0007869226017418 0.9502422500701047 0.0 0.059168607653049245 0.7626176447504033 7.993820245320921 0.05763365804230196 0.01000797558918954 3.4087498792110985e-12 11.46740486443952 -0.05054467253163719 YMEDSTY(ph)YK ddPTM_A549_MK2206_60min_R1 1 YMEDSTYYK 9 0 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-4;Q05397-3;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 YMEDST(0.002)Y(0.499)Y(0.499)K 122.44 4.1133e-05 51597000.0 29644.0 27668.0 25490.0 25710.0 35608.0 29404.0 24718.0 27789.0 38197.0 39223.0 40258.0 True False 34647.18247378385 29076.18302041702 29104.865290257443 32008.95115416575 30370.110369632366 32515.511763204486 29208.940645025552 31728.175850243293 29545.44048807503 30362.497058443438 30260.827535723656 1.1449515857714727 0.9608522102077963 0.9618000451540338 1.0577685331433315 1.0036113630329409 1.0745083466345764 0.9652393217119947 1.0484900260175436 0.9763593032343847 1.003359773376976 1.0 14.885163820685069 -8.776195872261335 24.991817618634553 0.9888363370060748 1.022514806382985 0.06801417215676009 0.05328247765989262 443.9722427859237 751914.5360634828 0.008530376534679028 0.009101205917529918 1.6741876260967572e-09 8.776195872261335 0.033678469376910214 YMEDSTY(ph)YK ddPTM_A549_PD325901_60min_R1 3 YMEDSTYYK 9 0 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-4;Q05397-3;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 YMEDS(0.001)T(0.006)Y(0.939)Y(0.054)K;YMEDST(0.018)Y(0.96)Y(0.021)K;YMEDST(0.001)Y(0.892)Y(0.107)K 138.06 1.5660999999999998e-05 141617000.0 76815.0 80810.0 81010.0 84589.0 88243.0 86216.0 85037.0 80915.0 86417.0 92227.0 97536.0 True False 84613.20225178591 87620.14230271963 86507.8257527037 89813.87041444253 82045.11610182353 85513.88548082372 88273.12956903178 79301.08684841066 82785.19401321249 86403.77148044172 85539.69033164601 0.9891689100548762 1.0243214812095707 1.0113179673354455 1.0499672148241956 0.9591467514521778 0.9996983289193327 1.0319552154887157 0.9270677335977293 0.9677986171360445 1.010101522994128 1.0 16.384306363969596 -6.768661951572172 24.99995883423209 0.9833211642652823 1.0185690129986975 0.22966434856047668 0.0294719279054047 176.96307115488167 612536.9300972319 0.004138205246172313 0.007935796570573722 1.7034839592949638e-07 6.768661951572172 0.035247848733415243 YMEDSTYY(ph)K ddPTM_A549_PD325901_60min_R1 2 YMEDSTYYK 9 0 H0YBP1;E7ESA6;Q05397;Q05397-7;E9PEI4;H0YB16;H0YBZ1;Q05397-5;Q05397-4;Q05397-3;Q05397-2 H0YBP1;Q05397-2 PTK2 Focal adhesion kinase 1 1 YMEDS(0.003)T(0.017)Y(0.104)Y(0.876)K;YMEDS(0.071)T(0.052)Y(0.026)Y(0.852)K 92.06200000000001 0.0010738 2484400.0 4279.8 4695.8 4735.1 5027.6 5284.1 4971.2 4760.8 5163.5 5714.8 6196.6 6839.6 True False 4714.282145377762 5091.531545911533 5056.452360469416 5338.143433491958 4912.9630451553785 4930.716195396109 4941.974849209722 5060.509941812613 5474.626829752328 5805.34561848163 5998.372559796651 0.7859268657259895 0.8488188246320163 0.8429707074815027 0.8899319574229521 0.8190493331614486 0.8220089943134947 0.8238859457201269 0.8436471545182194 0.9126853617671794 0.9678201146409676 1.0 12.550355415651488 -9.352958902029512 0.7409113009681145 0.9874511668833673 0.8322959817392244 0.8143920608963657 0.02744496630365765 0.15867028556394625 0.18943807827217002 0.009680305653076898 0.006793879871064086 4.436506253020862e-10 9.352958902029512 -0.15515518514414295 YMEDVTQIVVEPEPTAEEKPS(ph)PR ddPTM_A549_PD325901_60min_R1 1 YMEDVTQIVVEPEPTAEEKPSPR 23 1 O15297-2;O15297 O15297-2 PPM1D Protein phosphatase 1D 1 YMEDVTQIVVEPEPT(0.177)AEEKPS(0.823)PR 44.301 0.0116 1344800.0 803.52 622.9 651.91 970.38 1159.5 950.5 837.51 1050.8 949.57 726.28 762.54 True False 885.0927588798403 675.3939690677402 696.1525328532905 1030.3181687071217 1078.060720057846 942.7594431372706 869.3819013530573 1029.8409696633466 909.6628751186257 680.4225568522799 668.7524141393269 1.3234984131144256 1.0099312612380784 1.040971992227089 1.540657120517649 1.6120475937949206 1.4097286577284154 1.3000056268536049 1.5399435544299824 1.3602386412157428 1.0174506176967932 1.0 9.385328384191645 -10.55578499897142 0.9100038187552657 1.0050447589190088 1.3467276252906248 0.3397317788537536 0.18140299398855267 0.5693145567552423 0.8616699638363174 0.12273502241659452 0.03639909717319977 2.7810897281902396e-11 10.55578499897142 0.34168286637161605 YMLTHQELAS(ph)DGEIETK ddPTM_A549_MK2206_60min_R1 15 YMLTHQELASDGEIETK 17 0 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(0.998)DGEIET(0.002)K;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(0.999)DGEIET(0.001)K;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK 248.65 2.0514999999999998e-86 488918800.0 35031.69 40021.31 37098.36000000001 35335.89 51857.90000000001 39414.42 37918.74 38615.15 56308.619999999995 53196.83 56112.14 True False 40944.182829409925 42058.22373416389 42359.46529185859 43993.18463628837 44229.671605744734 43585.22776322547 44808.08422987932 44088.96576643715 43554.80747638902 41179.62915619701 42177.94702171947 0.9707485954289283 0.9971614719063039 1.004303629810281 1.0430376000433152 1.048644486725936 1.0333653210001266 1.06235811351381 1.0453084817934264 1.0326440842168192 0.9763308094391512 1.0 15.364201254347593 -5.6829583751129995 1.841027793147569 1.0261697502075098 0.972824549971673 0.3794021384149959 0.023298940108797538 0.36683627923160156 2.1064635315358604 0.0033063423931930513 0.025344053441799953 2.075112396748562e-06 5.6829583751129995 -0.053345200235836776 YMLTHQELAS(ph)DGEIETK ddPTM_A549_PD325901_60min_R1 13 YMLTHQELASDGEIETK 17 0 H7BYN4;Q02241;A0A2U3TZL8;Q02241-2;Q02241-3 H7BYN4;Q02241;Q02241-2 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 1 YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK 230.33 5.170399999999999e-64 1029778400.0 58693.9 54569.6 60531.799999999996 59846.200000000004 72259.4 68944.7 69445.7 69374.1 67109.2 70973.5 72073.3 True False 64652.46151983452 59168.37170402786 64639.85195528343 63542.76385341836 67184.14902539708 68383.23722174235 72088.49411564502 67990.37915257124 64288.833702529424 66492.22109758668 63208.74101029179 1.0228405199418171 0.9360789466506527 1.0226410291063799 1.0052844406926595 1.062893326960238 1.0818636177329974 1.1404829927542364 1.0756483686568112 1.0170877108921021 1.0519466142627372 1.0 15.947836459157713 -5.943203719642756 12.593599661631576 1.0309476148546655 0.979369762548935 0.1700815709078919 0.04634098640180528 1.4378118962311026 315.2449155179208 0.007320919256669955 0.02277398619893378 1.1397150425534333e-06 5.943203719642756 -0.05157785230573042 YMNAT(ph)LKR ddPTM_A549_PD325901_60min_R1 2 YMNATLKR 8 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 YMNAT(1)LKR;YMNAT(1)LKR 55.806000000000004 0.012411 16712400.0 4513.200000000001 4770.1 4770.5 4845.4 5400.1 5144.3 4798.9 5615.0 5752.1 6083.0 5282.1 True False 4971.376741557762 5172.093067667406 5094.2548173469095 5144.689353298178 5020.815605333652 5102.40652638723 4981.524765558842 5503.0044201177125 5510.359240466572 5698.918341868725 4632.435185990688 1.0731670367654778 1.1164955061451782 1.0996926266238642 1.1105798887066218 1.083839363908964 1.1014523293963872 1.0753576824180644 1.187929069522609 1.189516748584175 1.2302208477958358 1.0 12.17755507580854 -11.033647595600375 1.359466771978166 1.0006861464725627 1.1229826425542004 0.0 0.07764740643818521 0.2835225208344518 0.9423379207236203 0.0311932322999372 0.0071770674809788675 9.254488165675919e-12 11.033647595600375 0.12229649608163773 YMNSDTTS(ph)PELR ddPTM_A549_MK2206_60min_R1 4 YMNSDTTSPELR 12 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 YMNS(0.003)DT(0.013)T(0.104)S(0.88)PELR;YMNSDT(0.001)T(0.013)S(0.986)PELR;YMNSDT(0.015)T(0.163)S(0.822)PELR;YMNSDT(0.001)T(0.009)S(0.989)PELR 136.38 2.9971000000000004e-08 86703000.0 21146.7 22440.9 19311.199999999997 18844.199999999997 27486.000000000004 22176.1 20970.8 23667.5 30935.1 31722.4 32833.2 True False 24715.745972822984 23583.045957166265 22049.818540338158 23461.02984594829 23442.84581048403 24522.76018269619 24780.92290956799 27022.440603678893 23928.34924320365 24556.287807836357 24679.81028977898 1.0014560761457265 0.9555602608069101 0.8934354957124602 0.9506162960930279 0.9498794980686204 0.9936364945581518 1.004096977189119 1.094920920638928 0.9695515874007127 0.9949949987259918 1.0 14.591043684286092 -7.260862550241735 4.655656627477671 0.9965615066324743 0.9470074357071184 0.34302892655034734 0.03860772955620793 0.2191700963981413 13.294664569470601 0.006096873137410377 0.010308737862478956 5.4845051643050584e-08 7.260862550241735 -0.04955407092535591 YMNSDTTS(ph)PELR ddPTM_A549_PD325901_60min_R1 2 YMNSDTTSPELR 12 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 YMNSDT(0.001)T(0.027)S(0.972)PELR;YMNSDTT(0.004)S(0.996)PELR 159.65 6.2661e-14 34895000.0 21277.0 21096.9 17774.6 20134.4 20624.9 18461.5 17616.1 19052.3 19689.1 23333.0 26031.0 True False 23437.025376700472 22874.80980257698 18980.891243352766 21378.056159459855 19176.27817604232 18311.155664890826 18286.4903253998 18672.286930259783 18861.6355976896 21859.75039796532 22829.35202410473 1.0266180727317236 1.0019911988051282 0.8314248789589601 0.9364285125958678 0.8399834632097637 0.8020882785265524 0.8010078562935875 0.8179070045678193 0.8262010931267014 0.9575282896721886 1.0 14.478602291022819 -5.668141013819756 6.557988747484225 0.8860167381894607 1.0191601303467959 0.3997301775527634 0.06633338176235873 0.2151029206815164 12.520846934017065 0.011655910068631174 0.046054280716833665 2.1471331946893125e-06 5.668141013819756 0.13314339215733517 YMNSDTTS(ph)PELREHLAQKPVFLPR ddPTM_A549_MK2206_60min_R1 2 YMNSDTTSPELREHLAQKPVFLPR 24 2 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 Y(0.002)MNS(0.008)DT(0.095)T(0.095)S(0.799)PELREHLAQKPVFLPR;Y(0.001)MNS(0.006)DT(0.015)T(0.191)S(0.787)PELREHLAQKPVFLPR 42.347 0.014659 7877400.0 1535.92 2242.4 2473.3999999999996 2178.6 2838.2 2235.0 2630.0 2099.3599999999997 3139.6000000000004 3340.8999999999996 3068.8 True False 1795.1457463612887 2356.5285819352 2824.165312237063 2712.3570978010716 2420.7045397408046 2471.5062165270706 3107.8369567285854 2396.950709020358 2428.4856129109708 2586.188369644178 2306.7322654287063 0.7782202439638831 1.0215873845668166 1.224314305809648 1.1758439149837703 1.0494085403929252 1.0714317623973326 1.3472898451658817 1.0391109297527792 1.0527817420803436 1.121148044965476 1.0 11.171634849691515 -8.494834908763202 24.980972934669698 1.0260310728454753 1.1047597958398732 0.00543192264553527 0.13695644939821047 1572.7612421027363 1400991.3576057735 0.02191811396321967 0.026469755747099203 3.200111358024418e-09 8.494834908763202 0.07872872299439782 YMNSDTTS(ph)PELREHLAQKPVFLPR ddPTM_A549_PD325901_60min_R1 3 YMNSDTTSPELREHLAQKPVFLPR 24 2 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 YMNSDT(0.001)T(0.163)S(0.836)PELREHLAQKPVFLPR;YMNSDT(0.001)T(0.119)S(0.88)PELREHLAQKPVFLPR;YMNSDT(0.015)T(0.075)S(0.91)PELREHLAQKPVFLPR 125.05 3.8964e-17 26247700.0 3204.6800000000003 2688.25 3528.9 4034.7 4251.5 5340.5 3882.2999999999997 4060.8 4814.6 3944.3 4022.0 True False 3530.0167544392734 2914.7982619141953 3768.392374999581 4283.914255531462 3952.8893068787665 5297.008738637132 4030.043050976074 3979.804158364029 4612.259105222504 3695.256224861549 3527.319497558649 1.0007646760897309 0.8263493749096458 1.068344497176336 1.2144956697278124 1.120649634833098 1.501709369481084 1.1425228289542169 1.128280032789362 1.3075818928267686 1.0476102965493015 1.0 11.784356542781627 -5.970387812939286 4.736441235228097 1.1734958422899404 0.915627975851282 0.377804627958076 0.13306119659668594 0.16868184754864002 9.325900864685511 0.020664196844093773 0.06574901930090879 1.0705628952741057e-06 5.970387812939286 -0.25786786643865844 YMS(ph)FTDK ddPTM_A549_MK2206_60min_R1 1 YMSFTDK 7 0 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 Y(0.005)MS(0.989)FT(0.006)DK 63.816 0.009313799999999999 7111000.0 3858.2 4343.8 3665.8 3990.1 4893.4 4422.7 4365.1 3909.9 5516.0 5637.0 6008.0 True False 4509.369836066415 4564.880866130095 4185.665562221489 4967.674679122393 4173.587342247783 4890.707178449343 5158.182167230401 4464.140298566565 4266.634807241979 4363.597784933476 4516.047787635448 0.9985212841220775 1.0108132333383069 0.9268426197086495 1.10000489647684 0.9241681086003359 1.0829617861528569 1.1421894563102415 0.9885059920732016 0.944771846507838 0.9662426063959361 1.0 12.140845037075017 -8.506735496945634 24.801031184904982 0.9735368164506066 1.0261425055889937 0.13462147675056702 0.06395244733682671 1034.1540919354325 1588783.132029291 0.010550850075643584 0.012572562403556893 3.1136120765150473e-09 8.506735496945634 0.052605689138387035 YMS(ph)FTDK ddPTM_A549_PD325901_60min_R1 3 YMSFTDK 7 0 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 Y(0.136)MS(0.853)FT(0.011)DK;Y(0.018)MS(0.942)FT(0.04)DK;Y(0.004)MS(0.993)FT(0.003)DK 57.248999999999995 0.012646 37445500.0 16642.3 18551.6 17909.1 17927.199999999997 21857.3 18141.7 17079.6 18439.2 20576.8 20109.6 21784.3 True False 18331.814044586277 20115.008438845856 19124.51922216697 19034.522428374756 20322.118651591507 17993.960010061473 17729.57352431574 18071.415690727437 19712.028653749527 18839.876424074184 19104.969202055407 0.9595312010560085 1.0528678809218799 1.0010232950341245 0.9963126465719153 1.0637085271723523 0.941847108977574 0.9280084849552286 0.9459013254406725 1.0317749505520695 0.9861244069447281 1.0 14.221660311566897 YMS(ph)FTDKSAEDYNSSNALNVK ddPTM_A549_MK2206_60min_R1 4 YMSFTDKSAEDYNSSNALNVK 21 1 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 Y(0.243)MS(0.472)FT(0.271)DKS(0.01)AEDY(0.001)NS(0.002)S(0.002)NALNVK;Y(0.313)MS(0.339)FT(0.339)DKS(0.006)AEDY(0.001)NS(0.001)S(0.001)NALNVK;Y(0.277)MS(0.302)FT(0.302)DKS(0.107)AEDY(0.005)NS(0.006)S(0.001)NALNVK;YMS(0.981)FT(0.018)DKS(0.001)AEDYNSSNALNVK 145.14 3.3432e-22 16460100.0 5045.18 5429.9400000000005 6279.200000000001 6193.860000000001 9306.4 5300.6 5161.299999999999 5107.599999999999 10055.7 9025.7 8641.6 True False 5896.683041191628 5706.300752851066 7169.684979622775 7711.355978052938 7937.440888113529 5861.505973746488 6099.041401050665 5831.617941368977 7778.100005653222 6986.788101379114 6495.652223973119 0.9077892162128214 0.8784800288092949 1.103766755424812 1.1871565336569425 1.22196210856537 0.9023737373306062 0.9389421093914624 0.8977725007885382 1.1974317185496859 1.0756099403834134 1.0 12.665258677625374 -8.765546458303675 24.999936643868907 1.093231633045061 1.0115803460240849 0.08902302754934976 0.12138934051285041 233.13317536082977 1419084.2857311429 0.024172541191793333 0.026192021402635927 1.7157481595211262e-09 8.765546458303675 -0.08165128702097624 YMS(ph)FTDKSAEDYNSSNALNVK ddPTM_A549_PD325901_60min_R1 3 YMSFTDKSAEDYNSSNALNVK 21 1 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 Y(0.445)MS(0.484)FT(0.058)DKS(0.008)AEDY(0.002)NS(0.003)S(0.001)NALNVK;Y(0.447)MS(0.499)FT(0.048)DKS(0.005)AEDY(0.001)NSSNALNVK;Y(0.001)MS(0.957)FT(0.043)DKSAEDYNSSNALNVK 118.05 2.6166999999999997e-15 19888300.0 5293.4 5580.1 6505.9 6374.8 7550.1 8651.8 8014.3 8747.0 7616.5 8248.8 6804.3 True False 5830.782071204875 6050.354610362653 6947.429497154853 6768.55691777876 7019.807022430997 8581.342609295149 8319.28857209323 8572.534223111245 7296.404992092215 7727.969360250982 5967.414236011515 0.9771036232105178 1.0138988799957307 1.1642277915330976 1.134252902527295 1.1763565834040168 1.4380336725259288 1.394119503534525 1.436557591624632 1.2227079776129246 1.2950281402646824 1.0 12.5428902116298 -5.7269489861291705 2.419699828694194 1.181885946644452 0.9741734847047762 0.22214542607293708 0.14322195899700926 0.4716144642376468 5.244565328119196 0.025017528865991043 0.13577646377339503 1.8752147649428671e-06 5.7269489861291705 -0.20771246193967585 YMS(ph)QMSVPEQAELEKLK ddPTM_A549_PD325901_60min_R1 1 YMSQMSVPEQAELEKLK 17 1 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 Y(0.134)MS(0.433)QMS(0.433)VPEQAELEKLK 42.172 0.017003 2131800.0 1649.9 1947.5 2187.2 2565.4 2574.7 3301.2 2318.1 2049.9 2746.3 2423.3 2927.9 True False 1817.3966334078161 2111.6226597518435 2335.6365447020553 2723.858931553873 2393.8619542328024 3274.3161217093716 2406.3165640129937 2009.0131363845596 2630.882561515506 2270.292424437034 2567.7868614873105 0.7077677126033528 0.8223512205871916 0.9095912825682154 1.06078077289334 0.932266610650945 1.2751510535468766 0.9371169391447115 0.7823909244636066 1.0245720160713219 0.8841436407701057 1.0 11.326309741547282 -5.690049883671132 1.705713281465483 1.0060314892023858 0.7039892957906358 0.34610084854374024 0.11804026571549511 0.337880237867592 1.611412144495823 0.01549868335023402 0.1271067559956235 2.041503441263762e-06 5.690049883671132 -0.30204219341175 YMSFT(ph)DKSAEDYNSSNALNVK ddPTM_A549_MK2206_60min_R1 1 YMSFTDKSAEDYNSSNALNVK 21 1 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 YMS(0.407)FT(0.484)DKS(0.109)AEDYNSSNALNVK 114.35 6.407600000000001e-15 4687600.0 1794.8 2214.5 2676.2 2031.6 2632.2 2014.2 2022.9 1420.2 3635.5 3095.6 3064.3 True False 2097.7183613529633 2327.208591105736 3055.7254017178097 2529.342091201991 2245.006866854256 2227.3413070822485 2390.434745158273 1621.5176991800897 2812.0650547005453 2396.301810012429 2303.349739622388 0.9107250736906607 1.0103583277315322 1.326644125793405 1.098114649152956 0.9746704237899639 0.967000915565432 1.0378079820175992 0.703982409308767 1.220858910970922 1.0403551700339175 1.0 11.16951777061274 YMSFT(ph)DKSAEDYNSSNALNVK ddPTM_A549_PD325901_60min_R1 2 YMSFTDKSAEDYNSSNALNVK 21 1 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 YMS(0.345)FT(0.653)DKS(0.002)AEDYNSSNALNVK;YMS(0.453)FT(0.537)DKS(0.01)AEDYNSSNALNVK 144.4 5.1449e-22 17589500.0 6453.0 6672.7 7555.1 7724.0 9245.2 10458.599999999999 8112.900000000001 9418.400000000001 9535.8 9586.1 8773.5 True False 7108.103809552482 7235.031846842688 8067.834518506997 8201.093937523245 8595.84904620853 10373.428629137772 8421.640849049221 9230.542623408137 9135.043487637759 8980.832010025944 7694.41511979881 0.9238004057335473 0.9402965312107915 1.0485312259468982 1.0658502056148074 1.1171543141843496 1.3481763678756407 1.0945134513706125 1.1996418804668667 1.187230393136966 1.1671883918658097 1.0 12.909595950938089 -5.93182967177393 1.575075862708706 1.1193941796096074 0.9149245354429644 0.4662320536933232 0.08653744252485751 0.4064464869458642 1.7880667136923685 0.01508104779595787 0.08608154365476747 1.1699581530637671e-06 5.93182967177393 -0.20446964416664304 YMSGQTS(ph)PR ddPTM_A549_PD325901_60min_R1 2 YMSGQTSPR 9 0 Q9UJ41;Q9UJ41-3;E9PFK9;Q9UJ41-4;Q3HKR1;A0A0A0MSJ3 Q9UJ41 RABGEF1 Rab5 GDP/GTP exchange factor 1 Y(0.005)MS(0.012)GQT(0.089)S(0.895)PR;Y(0.004)MS(0.014)GQT(0.238)S(0.744)PR 40.496 0.034835000000000005 61028000.0 5616.6 5303.0 4784.799999999999 5633.2 7096.7 5070.1 5591.700000000001 5479.9 5522.3 6375.9 6289.9 True False 6186.793097277616 5749.902420880117 5109.525301339795 5981.1499700745635 6598.252274285913 5028.810786586298 5804.49520339565 5370.599095601614 5290.216935315548 5973.3245858820965 5516.282174961252 1.1215512370559748 1.0423510325449414 0.9262624969643953 1.0842719390286768 1.1961411807821924 0.9116304472987953 1.0522476949679287 0.9735903503956156 0.9590185504520004 1.0828533415124026 1.0 12.429480541732447 -7.294518826077971 24.999959360389578 0.981262035215285 1.0647011593087943 0.19099017169401133 0.07487522662935507 668.1868277653401 504984.1528942414 0.010129737971407584 0.01619408294347363 5.075527368278551e-08 7.294518826077971 0.08343912409350929 YMSQMS(ph)VPEQAELEK ddPTM_A549_MK2206_60min_R1 4 YMSQMSVPEQAELEK 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 Y(0.006)MS(0.08)QMS(0.915)VPEQAELEK;Y(0.007)MS(0.083)QMS(0.91)VPEQAELEK;YMSQMS(1)VPEQAELEK;YMSQMS(1)VPEQAELEK 133.45 1.8838e-09 19716200.0 7410.299999999999 8531.4 8979.8 8149.099999999999 12241.399999999998 9452.9 8551.3 8382.6 13804.3 13445.5 11710.6 True False 8660.977475559317 8965.611819444328 10253.270668240633 10145.629865827 10440.706276084526 10453.199603672816 10104.960520179915 9570.859220635837 10677.648090937344 10408.152211694696 8802.534823882097 0.9839185699170742 1.0185261403476402 1.1648088730558106 1.1525804860551032 1.1861022404316899 1.187521527925378 1.147960300340331 1.0872844484147004 1.213019693142013 1.1824039802099289 1.0 13.103703314236165 -5.646162848040296 5.457460136519394 1.122790252656431 0.9928592188471869 0.4291626186984644 0.06010316927209224 0.207505162280086 8.868930783986386 0.01136941992275724 0.04613839327812895 2.2585887050913803e-06 5.646162848040296 -0.1299310338092442 YMSQMS(ph)VPEQAELEK ddPTM_A549_PD325901_60min_R1 7 YMSQMSVPEQAELEK 15 0 A0A5H1ZRS1;A0A4W8VX11;Q15154-5;Q15154-4;Q15154-2;Q15154;E7EV93;E9PGW9;E5RGQ4;Q15154-3 A0A5H1ZRS1 PCM1 Pericentriolar material 1 protein 1 YMSQMS(1)VPEQAELEK;Y(0.006)MS(0.009)QMS(0.984)VPEQAELEK;Y(0.013)MS(0.081)QMS(0.906)VPEQAELEK;Y(0.002)MS(0.026)QMS(0.972)VPEQAELEK;YMS(0.001)QMS(0.999)VPEQAELEK;YMSQMS(1)VPEQAELEK;YMS(0.065)QMS(0.935)VPEQAELEK 154.82 2.1129e-19 96043500.0 22479.3 25622.999999999996 25143.5 27061.6 30934.100000000002 28426.399999999998 28504.1 24947.500000000004 24060.1 26294.1 25523.2 True False 24761.38198761397 27782.34013392633 26849.889110148193 28733.133570647205 28761.39553285156 28194.90482314289 29588.839123542028 24449.90254156487 23048.93766825155 24633.88603862081 22384.00820489531 1.1062085825271784 1.2411691364485125 1.1995121188472495 1.2836455967865201 1.2849081929196904 1.259600361340859 1.3218740295614724 1.0922933157350145 1.0297055584178538 1.1005127327121627 1.0 14.450180775987109 -8.471035767411362 3.82255234328084 1.0150252696907067 1.2442452634271142 0.6921398119592184 0.05948843185299472 0.07289918197781697 2.1747498567123587 0.009017724544877382 0.01076614610822327 3.3803699517493083e-09 8.471035767411362 0.22921999373640745 YNAPTSHVT(ph)PSVK ddPTM_A549_MK2206_60min_R1 2 YNAPTSHVTPSVK 13 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 YNAPTS(0.001)HVT(0.996)PS(0.003)VK;YNAPTS(0.003)HVT(0.995)PS(0.002)VK 109.35 5.7088e-05 27012000.0 3620.7 3690.9 4311.6 3447.0 4943.2 3700.2 3696.5 3434.0 6253.1 6411.6 6639.1 True False 4231.785642383928 3878.7510448914686 4923.049713043312 4291.515154741709 4216.061828217443 4091.7527080060236 4368.106201728983 3920.780016183939 4836.782834148804 4963.215106950408 4990.4282401615355 0.8479804615419034 0.7772381162955901 0.9864984478534367 0.8599492765379984 0.8448296669788348 0.8199201573678129 0.8752968666247352 0.7856600330670274 0.9692119796901922 0.9945469342706655 1.0 12.284947906526892 -8.870359180302449 6.667799630330665 0.9864510382202957 0.852054964491011 0.5815300335117228 0.05232865028810695 0.1081360507447592 6.023921606972106 0.008887378501922914 0.009431395780004938 1.347847693217373e-09 8.870359180302449 -0.13439607372928464 YNAPTSHVT(ph)PSVK ddPTM_A549_PD325901_60min_R1 2 YNAPTSHVTPSVK 13 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 YNAPTS(0.003)HVT(0.996)PSVK;YNAPTS(0.004)HVT(0.996)PSVK 156.22 2.0438e-18 83071000.0 10755.7 11414.2 12461.400000000001 13318.4 15617.400000000001 15363.2 15077.3 16699.5 15687.5 15253.7 17250.6 True False 11847.610746072149 12376.11469213838 13307.105540485636 14141.047319719008 14520.487701105136 15238.087192852732 15651.074902115133 16366.415371995687 15028.208929750763 14290.57877878728 15128.885560563214 0.7831119284129934 0.818045363790672 0.8795826690085851 0.934705154792153 0.9597856790559641 1.0072180883286062 1.0345160480896967 1.0817991389040822 0.9933454033736042 0.9445889931270836 1.0 13.885018097740918 -6.13110864875146 0.9706378032720997 1.0073616596653683 0.7706164706740025 0.862818019505116 0.03212096309243499 0.17844089129144425 0.257539863740171 0.004593649242792707 0.031972563334420015 7.394202689338338e-07 6.13110864875146 -0.23674518899136576 YNASSVT(ph)PESLR ddPTM_A549_MK2206_60min_R1 2 YNASSVTPESLR 12 0 Q04656-5;Q04656;Q04656-2;Q04656-3 Q04656-5 ATP7A Copper-transporting ATPase 1 1 YNAS(0.002)S(0.025)VT(0.972)PES(0.001)LR;YNAS(0.027)S(0.306)VT(0.666)PES(0.001)LR 89.359 0.00029175 8011600.0 5280.5 6589.7 5461.2 5737.799999999999 7222.900000000001 5290.8 6004.4 6130.299999999999 7431.2 8121.7 8181.0 True False 6171.719304169998 6925.087583115584 6235.680279448956 7143.561257579625 6160.420978117777 5850.668944251195 7095.321757787501 6999.288798256375 5748.045065187921 6287.002329234379 6149.431915886418 1.003624300356266 1.126134523942828 1.014025419704172 1.1616619803733377 1.0017870044553172 0.9514161672619873 1.1538174346572527 1.138200876763013 0.9347278161318355 1.0223712393648203 1.0 12.586237425197165 -8.774236670960237 24.978861393946282 0.9691770216561032 1.0686948596433012 0.20756918240351452 0.07034943267512464 201.89996011157598 394084.58426699054 0.011909602519489339 0.012719038634988697 1.6817573291969812e-09 8.774236670960237 0.09951783798719804 YNASSVT(ph)PESLRK ddPTM_A549_PD325901_60min_R1 1 YNASSVTPESLRK 13 1 Q04656-5;Q04656;Q04656-2;Q04656-3 Q04656-5 ATP7A Copper-transporting ATPase 1 1 YNASS(0.002)VT(0.998)PESLRK 113.29 1.2758e-14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YNDWS(ph)DDDDDSNESK ddPTM_A549_MK2206_60min_R1 2 YNDWSDDDDDSNESK 15 0 Q9UH62;H3BV87 Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 YNDWS(1)DDDDDSNESK;YNDWS(1)DDDDDSNESK 248.2 1.7873999999999998e-76 40219000.0 4314.0 3729.4 2763.9 3130.3999999999996 6619.5 4432.9 4476.0 4320.1 5997.799999999999 6727.8 6933.1 True False 5042.097732826317 3919.2105304446727 3155.8625804528265 3897.3481405289976 5645.780318798629 4901.986535679131 5289.231261717548 4932.487404751378 4639.307876518478 5207.98530733997 5211.419926174318 0.9675093936495922 0.7520427418946738 0.6055667409572063 0.7478476491511643 1.083347801324307 0.9406239767896921 1.0149309279707863 0.946476675191342 0.8902195451987257 0.9993409437575549 1.0 12.34746079370145 -6.738681679704743 24.794137015616496 0.9592715663014566 0.755464812762036 0.5425867315770281 0.09270626094628559 134.7398082473721 146795.90772827572 0.01335091142245316 0.027776303712204395 1.8252330341684518e-07 6.738681679704743 -0.20380675353942057 YNDWS(ph)DDDDDSNESK ddPTM_A549_PD325901_60min_R1 2 YNDWSDDDDDSNESK 15 0 Q9UH62;H3BV87 Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 YNDWS(1)DDDDDSNESK;YNDWS(1)DDDDDSNESK 358.85 5.6601999999999965e-236 164177000.0 19080.2 15909.1 16266.2 16508.3 15001.2 16492.0 12884.4 12929.0 21585.0 18521.4 24887.0 True False 21017.207857899142 17249.8156899913 17370.12214860671 17527.980197930465 13947.567463330526 16357.694619905182 13374.722892614209 12671.120952395715 20677.85751385945 17351.955643118097 21826.056771691212 0.9629411339733542 0.7903312939405812 0.7958433504642979 0.8030759005751589 0.6390328591750376 0.7494571644806407 0.6127869560919251 0.5805501692284786 0.9473931883416982 0.7950110193804635 1.0 14.41376388735004 -8.89268946827056 7.862243799230391 0.9768855511529702 0.7399750300567399 0.27061589013874954 0.11478479967542506 0.137535823599723 9.220801869827458 0.018174874012151475 0.01930149903946186 1.2802964218372515e-09 8.89268946827056 -0.23691052109623023 YNGLIHR ddPTM_A549_MK2206_60min_R1 2 YNGLIHR 7 0 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5;H0YLP6 P46779 RPL28 60S ribosomal protein L28 0 ; 104.11 0.01095 10257100.0 592.26 622.25 665.3699999999999 579.01 1030.44 689.56 600.58 757.0899999999999 1208.75 1154.51 963.76 False True 692.2190086332209 653.9198671553595 759.7294710937066 720.8674759927464 878.8636410156137 762.5287815071168 709.6976119665608 864.4098259908848 934.9700549771098 893.7053891579824 724.4317935771535 0.9555337228024328 0.9026658864962084 1.0487246388542082 0.995079843794808 1.21317651821422 1.0525887851247462 0.9796610505761527 1.1932245846396903 1.2906253746268435 1.233663951639915 1.0 9.500706053883828 -6.187773571775652 0.9624227240236096 1.1320152895690372 0.9115554882037883 0.37682113301868536 0.09838499718145065 0.767947920143369 1.1145156018253464 0.01924898998834491 0.12492218385732659 6.489727004211021e-07 6.187773571775652 -0.2204598013652489 YNGLIHR ddPTM_A549_PD325901_60min_R1 2 YNGLIHR 7 0 P46779;H0YKD8;P46779-2;P46779-3;H0YMF4;P46779-4;P46779-5;H0YLP6 P46779 RPL28 60S ribosomal protein L28 0 ; 128.75 0.0061806000000000005 12944900.0 931.19 807.79 950.6300000000001 886.4300000000001 1426.87 1144.3899999999999 1066.1399999999999 1167.08 1104.18 1054.69 1265.96 False True 1025.7237232941538 875.8652982392514 1015.1454684025769 941.1827678714045 1326.6515736342712 1135.0704672612949 1106.7125411141938 1143.801673843451 1057.7751544893838 988.0966934054783 1110.2549455816381 0.9238632328332478 0.7888866442116182 0.9143354618166231 0.8477176990896803 1.1949071507528999 1.0223511921999648 0.9968093774483584 1.0302153378332743 0.952731765527276 0.8899727916887019 1.0 10.116675282402792 YNILGTNTIMDK ddPTM_A549_MK2206_60min_R1 1 YNILGTNTIMDK 12 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;A0A1W2PP35;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 64.297 0.0039643000000000005 1278100.0 2572.3 2666.6 2355.5 2774.8 3351.7 2590.8 2323.4 2874.7 3779.2 3163.9 3693.2 False True 3006.4413533030024 2802.3185500305044 2689.545319388048 3454.626124565505 2858.669369970141 2864.9567363661454 2745.5317054232687 3282.1975283995257 2923.217234142292 2449.172792576019 2776.076512865384 1.082982165430247 1.0094529228728044 0.9688296799182884 1.244427561184091 1.0297516501155464 1.0320164891309216 0.9889971305543781 1.1823152255309197 1.053003121706121 0.8822425395069734 1.0 11.438831615982531 -10.12509023738759 1.044452894713838 1.0058322445971717 1.0642031559779257 0.16827972582281492 0.0866110102029594 0.8939812519737784 1.9506806999552189 0.028564388402304262 0.014155423540798809 7.497384130521189e-11 10.12509023738759 0.05837091138075401 YNKEALS(ph)PPR ddPTM_A549_PD325901_60min_R1 1 YNKEALSPPR 10 1 O95243-2;O95243-6;O95243-3;O95243-5;O95243 O95243-2 MBD4 Methyl-CpG-binding domain protein 4 1 YNKEALS(1)PPR 46.001000000000005 0.011152 4502300.0 2036.5 1980.8 1912.2 2664.8 2843.1 2333.2 2190.4 2885.9 2769.3 3122.9 2605.1 True False 2243.2439808079375 2147.728967618204 2041.9733909927174 2829.3986438000957 2643.4104641625368 2314.1991927699937 2273.7568706328707 2828.338460555246 2652.9159515001625 2925.719561042554 2284.6892150895173 0.981859574594282 0.9400530073995438 0.8937641835512014 1.2384172976845063 1.1570109609236126 1.012916407835943 0.9952149533580136 1.237953259408382 1.1611714774940265 1.2805766060955996 1.0 11.157782214346588 -6.2346295743567595 24.963342252589694 1.0933700234915735 0.938708316254972 0.38108747804841636 0.10195611105445491 656.7747451399819 611540.2177387667 0.013390385737114138 0.03541692251969898 5.825999266899263e-07 6.2346295743567595 -0.15466170723660155 YNLDAS(ph)EEEDSNK ddPTM_A549_MK2206_60min_R1 2 YNLDASEEEDSNK 13 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK 246.96 1.9725e-57 48506000.0 8605.1 8632.5 7097.1 6859.5 10241.0 8985.8 8782.4 12691.7 9966.1 9942.5 9753.599999999999 True False 10057.430505503888 9071.857377611323 8103.575498292901 8540.07780793466 8734.562466170666 9936.671391708709 10378.048398773055 14490.787341701138 7708.7942625914175 7696.4823446338605 7331.511934334404 1.3718085158401856 1.237378791559577 1.1053075505944177 1.164845380383327 1.191372604232641 1.3553372729537563 1.4155399993514752 1.97650736594166 1.051460371562672 1.049781056563552 1.0 12.839895032166705 -8.959823074621312 24.999999648316503 1.0227019097333911 1.3422512771589217 0.29376489414141715 0.21977743866626812 138.8476572498064 86398.03133188799 0.03952993363546841 0.04202782838142645 1.0969249767238493e-09 8.959823074621312 0.31954936742553053 YNLDAS(ph)EEEDSNK ddPTM_A549_PD325901_60min_R1 2 YNLDASEEEDSNK 13 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(0.99)EEEDS(0.01)NK;YNLDAS(0.998)EEEDS(0.002)NK 283.88 1.3195999999999999e-98 79815000.0 21863.5 21716.0 23201.0 22390.0 27050.0 18242.6 20129.9 18480.0 21275.2 24506.0 21791.0 True False 24083.066424941986 23546.083532308618 24775.55937894677 23772.979448620586 25150.101317433986 18094.038313914745 20895.954360003943 18111.401902720452 20381.07733050093 22958.686977779867 19110.84514453022 1.2601779901834893 1.232079657086637 1.2964135908996086 1.243952283053517 1.3160119883359676 0.9467942509645368 1.093408177502011 0.9477028234883782 1.0664665626435819 1.201343363108719 1.0 14.222103960003059 -7.257135192313565 24.99705580866686 1.02502551759173 1.2676862315017505 0.7152456777861809 0.07087434281535668 91.72564518086139 532706.3473111306 0.006670021030898076 0.01129575769328966 5.5317788266869004e-08 7.257135192313565 0.24266071391002053 YNLDAS(ph)EEEDSNKK ddPTM_A549_MK2206_60min_R1 4 YNLDASEEEDSNKK 14 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK 166.91 1.1807e-20 260280800.0 34973.0 31272.800000000003 29168.300000000003 27313.8 37581.3 32756.399999999998 31988.4 32260.0 40840.799999999996 38330.899999999994 41574.5 True False 40875.58739224269 32864.451943071326 33304.80354043999 34005.682226163095 32053.14055364706 36222.66050606146 37800.27821544363 36832.95379210651 31590.424009356066 29671.923068033797 31250.404252172084 1.3080018761485814 1.051648857975559 1.0657399268083105 1.0881677546235102 1.025687229355415 1.1591101418646057 1.2095932555117679 1.1786392743878316 1.0108804914790934 0.9494892555180763 1.0 14.93158723200679 -8.780189517831975 22.519663728426785 1.0051379220191565 1.1286570442761394 0.410942437287683 0.07829315342806308 60.53232313425188 72701.12891915593 0.013167430817816786 0.014035351428867807 1.6588628533447663e-09 8.780189517831975 0.12351912225698292 YNLDAS(ph)EEEDSNKK ddPTM_A549_PD325901_60min_R1 4 YNLDASEEEDSNKK 14 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(0.999)EEEDS(0.001)NKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK 190.87 1.3221999999999997e-26 421356000.0 40828.1 39095.4 43336.100000000006 39046.2 48049.6 39391.9 38644.399999999994 41025.0 42798.6 43268.6 45419.5 True False 44972.93865594134 42390.10656331821 46277.14834713915 41457.995093645775 44674.761858121135 39071.10542674283 40115.03378902708 40206.72419151008 40999.92367814062 40536.61321173452 39833.18943793265 1.129031827240883 1.0641906199695532 1.1617736114063213 1.0407902474956185 1.121546190212374 0.9808681147067754 1.0070756159642602 1.0093774753879416 1.0292905051458647 1.0176592380305858 1.0 15.281683380267555 -7.257641164838874 24.999098690808946 1.0111592872485093 1.1010417778894457 0.6890116577994932 0.03207011243562794 146.97428911483937 967355.2937517264 0.004349699724378629 0.007356879931836955 5.5253378093274e-08 7.257641164838874 0.08988249064093634 YNLDAS(ph)EEEDSNKKK ddPTM_A549_MK2206_60min_R1 4 YNLDASEEEDSNKKK 15 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK 169.19 7.7432e-28 432039000.0 15579.800000000001 14981.6 14812.599999999999 15290.7 17817.8 14877.8 15181.5 15911.8 19572.5 19547.800000000003 17546.8 True False 18209.28935046071 15744.099448412597 16913.249415396913 19036.922186425603 15196.825223096943 16452.158920915637 17939.782037481 18167.34637784379 15139.36000085996 15131.93840346328 13189.445292956334 1.3805955402980565 1.1936892794741372 1.2823321254025164 1.4433451721121315 1.152195932850385 1.2473730741126556 1.3601619809637882 1.3774154996151238 1.147839023142615 1.147276330987499 1.0 13.687096270148816 -9.249858009861349 1.2920825053887828 1.0400576443398204 1.298679788355984 0.466158681813735 0.09347915340703204 0.183427612664824 0.6356339808658628 0.020589567851093712 0.01786122122690285 5.625252095827017e-10 9.249858009861349 0.25862214401616357 YNLDAS(ph)EEEDSNKKK ddPTM_A549_PD325901_60min_R1 4 YNLDASEEEDSNKKK 15 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK 202.97 2.8350999999999997e-39 598815000.0 30958.699999999997 30433.4 32361.5 30580.8 37707.5 28495.6 34449.2 31927.199999999997 30015.5 31774.6 32304.9 True False 34101.60443340963 32998.12942402658 34557.745995508216 32469.706561964114 35059.05528381302 28263.541281286067 35760.18315732554 31290.386949596133 28754.05291671294 29768.346333312842 28331.602097633608 1.2036595853595573 1.1647110287060942 1.2197596830711754 1.1460596704016304 1.237454033238075 0.9975977067547046 1.2622012350057819 1.1044340818343505 1.0149109400034464 1.0507117186923658 1.0 14.790124565203298 -8.626612064293736 3.420450156909871 1.0066621885097937 1.1723394256814879 0.49943664784512953 0.06695388388812769 0.11605222468886595 2.6748270906431846 0.010304468399636441 0.011695695535560074 2.362587684102555e-09 8.626612064293736 0.16567723717169414 YNLINEGS(ph)PPSK ddPTM_A549_MK2206_60min_R1 1 YNLINEGSPPSK 12 0 Q68D06 Q68D06 SLFN13 Schlafen family member 13 1 YNLINEGS(0.913)PPS(0.087)K 47.773999999999994 0.03472 13004000.0 1367.1 1671.9 1023.9 1302.5 2176.0 1077.5 1270.8 1164.9 1725.6 2059.0 1874.5 True False 1597.8330576140147 1756.9925687377204 1169.1044162689125 1621.6125584714475 1855.9132825297693 1191.5203348133869 1501.6879104983616 1330.0281423566305 1334.7543552169604 1593.870469962395 1409.0099164318658 1.1340112223342749 1.2469696261521532 0.8297346971336562 1.1508879671890246 1.3171754583740816 0.8456436827859644 1.0657752603340016 0.9439451964431547 0.9472994757886816 1.1311989017072814 1.0 10.460466049848836 -7.277215659165388 24.999040867583027 0.9714000757576974 1.1257738605562377 0.22700252661033293 0.1321398551756094 800.2205865626534 1268024.529816912 0.01761795000735497 0.028223778551294883 5.281829049676323e-08 7.277215659165388 0.15437378479854036 YNLINEGS(ph)PPSK ddPTM_A549_PD325901_60min_R1 2 YNLINEGSPPSK 12 0 Q68D06 Q68D06 SLFN13 Schlafen family member 13 1 YNLINEGS(0.999)PPS(0.001)K;Y(0.001)NLINEGS(0.989)PPS(0.009)K 126.1 2.3836e-06 36663000.0 6112.5 5671.5 5766.799999999999 6320.700000000001 7415.200000000001 7140.6 6114.8 6900.0 7197.200000000001 7081.700000000001 6494.0 True False 6733.036500215329 6149.457209130983 6158.169726585506 6711.115283648777 6894.38193305126 7082.449321058388 6347.50206014695 6762.374087054714 6894.726712937192 6634.560253429518 5695.279168857751 1.1822136019305463 1.0797464051905856 1.0812761840119933 1.1783645866467267 1.2105432813110024 1.2435649089487653 1.114519915872712 1.1873648133057155 1.2106038191486939 1.1649227468440586 1.0 12.475550845762363 -10.841444396298353 1.0422462703116733 0.9982165658754947 1.1664182496676894 0.0 0.06942184472453562 0.321387190432167 0.6089974058449947 0.04024598907459154 0.009451441388775248 1.4406404468835827e-11 10.841444396298353 0.1682016837921947 YNLQEVVKS(ph)PKDPSQLNSK ddPTM_A549_MK2206_60min_R1 1 YNLQEVVKSPKDPSQLNSK 19 2 Q9NXG2 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 1 Y(0.002)NLQEVVKS(0.966)PKDPS(0.032)QLNS(0.001)K 54.235 0.0022029 3078900.0 2171.0 2578.2 2516.4 2134.1 3329.5 2574.4 2173.4 2444.2 3078.3 3446.4 2840.5 True False 2537.4117241460226 2709.419367617434 2873.263358823217 2656.95459580339 2839.7349605619816 2846.8212992515855 2568.2786470547194 2790.672835048567 2381.0699650349848 2667.8558463712484 2135.125456188163 1.1884134099904653 1.268974317066388 1.3457117241030188 1.2444020973581797 1.3300084790482323 1.3333274122139935 1.2028701356218499 1.3070299110342454 1.1151897225214609 1.249507769503235 1.0 11.060105127202435 -9.065685011917605 0.9984717682606169 1.027718978081743 1.286171210465671 0.2500470894516843 0.08674752076489048 0.13926625629070596 0.28792524955371546 0.013405692342436099 0.012139048450584803 8.596367787204911e-10 9.065685011917605 0.258452232383928 YNLQEVVKS(ph)PKDPSQLNSK ddPTM_A549_PD325901_60min_R1 1 YNLQEVVKSPKDPSQLNSK 19 2 Q9NXG2 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 1 YNLQEVVKS(1)PKDPSQLNSK 78.758 6.6268e-05 4621600.0 3577.1 3794.2 4940.0 4200.3 4578.2 4677.5 4388.4 4365.9 5025.4 4626.5 4492.8 True False 3940.244558678161 4113.950549746058 5275.258106633208 4459.742991426579 4256.643025932582 4639.40799082018 4555.40296342462 4278.818699517708 4814.199914299251 4334.382000436568 3940.214082205745 1.0000077347250125 1.0440931543097918 1.3388252507539136 1.1318529649358544 1.0803075510936955 1.1774507410072055 1.1561308264942016 1.0859355888404956 1.2218117629802099 1.1000371832614146 1.0 11.944058301893474 -11.013614515180155 1.2912562471508233 0.9998166425103676 1.1479291415063024 0.07742178322673099 0.09188562168950092 0.4865470551178444 1.4416213197832275 0.0630329551396389 0.014203886541648435 9.69137692462089e-12 11.013614515180155 0.14811249899593482 YNQLLR ddPTM_A549_PD325901_60min_R1 1 YNQLLR 6 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 138.61 0.02509 39943000.0 8947.5 9434.6 8705.4 9201.7 10821.0 10385.0 9819.9 10284.0 10474.0 9402.5 10442.0 False True 9855.84361319864 10229.68685273158 9296.200793822825 9770.068110423052 10060.970290423411 10300.42800313578 10193.601668155461 10078.877552358072 10033.814204316144 8808.824545359314 9157.70019729175 1.0762356706232157 1.1170585007529352 1.0151239496322488 1.0668691811195568 1.0986350364907982 1.124783273226391 1.1131180808004681 1.1005904687007275 1.0956696537503479 0.9619035735592643 1.0 13.160769619824203 -10.618823761809674 0.8594514761431906 0.9990019537915875 1.0899827970168188 0.6228728790369933 0.03160465051450159 0.37634660686571114 0.48782201181902574 0.021693391063260153 0.005647469528250998 2.405338696675522e-11 10.618823761809674 0.09098084322523126 YNQS(ph)ISLR ddPTM_A549_MK2206_60min_R1 1 YNQSISLR 8 0 Q9UBH6-2;Q9UBH6 Q9UBH6-2 XPR1 Xenotropic and polytropic retrovirus receptor 1 1 YNQS(0.996)IS(0.004)LR 121.6 0.0011769999999999999 12906000.0 1818.4 2830.1 2470.2 2471.5 3864.7 3038.5 2078.0 2599.1 3818.0 3623.6 3883.6 True False 2125.3014643883585 2974.140001665541 2820.5115041190234 3077.0176109498516 3296.207749537132 3360.032053206937 2455.545701932321 2967.5303844099217 2953.229096093159 2805.026243300503 2919.194938092714 0.7280436933673727 1.018821991932038 0.9661949831832175 1.0540637662794292 1.1291495838543564 1.1510132500442907 0.8411722252220255 1.0165578001271776 1.011658747950105 0.9608903491498912 1.0 11.51135483905459 -5.26083595944552 24.0184610800959 1.014045782856056 0.7280435555359012 0.5208188659753895 0.07911038485139767 16.666363461174242 663095.6017649703 0.010230358731664228 0.084235178057321 5.484840977514688e-06 5.26083595944552 -0.2860022273201549 YNQS(ph)ISLR ddPTM_A549_PD325901_60min_R1 2 YNQSISLR 8 0 Q9UBH6-2;Q9UBH6 Q9UBH6-2 XPR1 Xenotropic and polytropic retrovirus receptor 1 1 YNQS(0.928)IS(0.072)LR;YNQS(0.999)IS(0.001)LR 152.37 0.00054567 51536000.0 8342.7 10354.9 11176.3 11144.8 12559.7 10756.3 11424.4 11858.900000000001 12232.3 12627.8 12655.8 True False 9189.644762428867 11227.543763524707 11934.790926551563 11833.188984322764 11677.550000612782 10668.7042590399 11859.161793671561 11622.364936372916 11718.218969969104 11830.478552926175 11099.216831726197 0.8279543414415533 1.011561800597651 1.0752822570721339 1.0661282830783672 1.0521057636457256 0.9612123468517425 1.0684683409169127 1.047133785435324 1.0557698932841406 1.0658840828399467 1.0 13.438170262174726 -5.269482591229983 4.170267685429114 1.0337657008805372 0.8127082482925522 0.76728610862777 0.03363700741570565 0.07824062506976343 3.010879629939977 0.004744090233890236 0.05088987142858918 5.376719853655533e-06 5.269482591229983 -0.22105745258798504 YNS(ph)DNDR ddPTM_A549_PD325901_60min_R1 1 YNSDNDR 7 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 YNS(1)DNDR 56.729 0.036896 1680700.0 760.52 571.07 489.93 517.03 523.3 444.28 339.78 511.89 550.24 775.23 600.86 True False 837.7274305347668 619.1960730703394 523.1795959884226 548.9657688396738 486.54521328699474 440.66193098056453 352.71051383475043 501.6799523800632 527.1153263111431 726.2818454984202 526.9580291653632 1.589742226457056 1.1750386915084488 0.9928297265288374 1.0417637429477413 0.9233092321557802 0.8362372458362934 0.6693332188018856 0.9520301895288751 1.0002985003303375 1.3782536849258402 1.0 9.041544249310274 -5.100680853934436 1.3610590472405342 0.9573944097382098 2.0560713626802176 0.5524864783829568 0.16126656883328297 0.7083125390257874 0.8648971600466566 0.016194051594546337 1.1808060390462982 7.930839228153043e-06 5.100680853934436 1.0986769529420077 YNS(ph)YDISR ddPTM_A549_PD325901_60min_R1 1 YNSYDISR 8 0 G3V1S3;Q6ZUT9;Q6ZUT9-2;Q6ZUT9-4;H0YGE5;Q6ZUT9-3 G3V1S3 DENND5B DENN domain-containing protein 5B 1 Y(0.004)NS(0.994)Y(0.002)DISR 86.014 0.0028706 13871000.0 8429.0 8025.0 8146.8 8079.3 10312.0 8211.9 8044.4 7264.7 9426.9 9340.6 9471.8 True False 9284.705874898162 8701.29491373995 8699.690838688146 8578.340011578395 9587.720694468742 8145.025009046766 8350.534044064581 7119.799859453101 9030.720175927803 8750.832921923231 8306.82864668722 1.117719682179904 1.0474869873727375 1.0472938841897985 1.032685321491428 1.1541974804418706 0.9805216112523302 1.005261381838518 0.8571020496844475 1.0871441509184463 1.053450515728777 1.0 13.020082079472786 -7.29652973232566 24.993801634506713 1.0199919464201617 1.0736454205919788 0.25058991148232956 0.06454326882539144 1010.3033214072386 719606.3118589618 0.010422761748808736 0.01666220688504388 5.052080566014114e-08 7.29652973232566 0.053653474171817095 YNSHS(ph)LENESIKR ddPTM_A549_MK2206_60min_R1 2 YNSHSLENESIKR 13 1 C9J2A2;Q13496-2;Q13496 C9J2A2 MTM1 Myotubularin 1 Y(0.005)NS(0.14)HS(0.852)LENES(0.002)IKR;YNS(0.017)HS(0.983)LENESIKR 67.685 0.00093572 19369700.0 2782.8 3966.2 3539.8 2728.5 4656.5 4033.6000000000004 3687.2 3933.3999999999996 5641.9 5534.6 5875.299999999999 True False 3252.468607072109 4168.062638990095 4041.7968675736847 3396.9826224870217 3971.5350184282524 4460.4328747130185 4357.116512110132 4490.971495532296 4364.018658262961 4284.33001605336 4416.30085996913 0.7364689839303302 0.9437904642708672 0.9151996197111301 0.7691918486076075 0.8992899588041231 1.0099929819419498 0.9865986603414035 1.016907959382932 0.9881615398579221 0.9701173339180762 1.0 12.108622743553612 -7.123749096661388 4.12847306851255 0.996341172190963 0.8518673675235566 0.6244846432870645 0.05595341716051086 0.1142409225998485 3.300424955722946 0.007615432267881676 0.01356723280836859 7.520572517800608e-08 7.123749096661388 -0.14447380466740634 YNSHS(ph)LENESIKR ddPTM_A549_PD325901_60min_R1 2 YNSHSLENESIKR 13 1 C9J2A2;Q13496-2;Q13496 C9J2A2 MTM1 Myotubularin 1 YNS(0.159)HS(0.841)LENESIKR;YNS(0.063)HS(0.934)LENES(0.003)IKR 88.551 4.2007e-05 16234600.0 5782.4 6714.9 6475.7 6734.4 7740.6 7167.1 6835.8 7247.4 7007.099999999999 7489.4 7794.299999999999 True False 6369.424991222108 7280.7881889436 6915.179943547508 7150.368593067909 7196.926959620322 7108.733513844431 7095.9401096932925 7102.8449215246865 6712.615954846633 7016.518005851003 6835.650512138581 0.9317950032570329 1.0651200168900612 1.0116345081229212 1.0460406921580412 1.0528518020106785 1.0399498191460954 1.0380782483089934 1.039088366046747 0.9820010462686081 1.0264594413349897 1.0 12.73886292256356 -8.76027280817511 24.999456775869998 0.9915004929570541 1.0309116835702326 0.06450793650788911 0.035240353865459643 31.9343851281878 684335.2199387241 0.005282063894166981 0.005827703539812014 1.7367095475525299e-09 8.76027280817511 0.03941119061317844 YNSHSLENES(ph)IKR ddPTM_A549_MK2206_60min_R1 2 YNSHSLENESIKR 13 1 C9J2A2;Q13496-2;Q13496 C9J2A2 MTM1 Myotubularin 1 YNSHSLENES(1)IKR;YNSHSLENES(1)IKR 97.904 3.5677e-05 22490000.0 2807.2 4629.1 3825.0 2522.9900000000002 6360.8 4206.3 2699.0 4220.0 5015.6 5112.2 5102.3 True False 3280.986730549384 4864.701417515271 4367.442516093946 3141.1226632613266 5425.134746100811 4651.407874084035 3189.37336357812 4818.197923207984 3879.574608267379 3957.350469422901 3835.2580936838135 0.8554800356077092 1.2684156577433003 1.1387610453874208 0.8190120681667707 1.414542284660144 1.212801788162397 0.8315928904056329 1.2562903996325432 1.0115550279801375 1.031834200660487 1.0 11.905107951816314 -8.953696220402025 24.998886591993987 1.0050973969694768 1.1044894015835216 0.039196245051049905 0.18529352332963236 276.77376815545585 149427.46195457593 0.030029508452051358 0.03195853585894407 1.112509631614264e-09 8.953696220402025 0.09939200461404485 YNSHSLENES(ph)IKR ddPTM_A549_PD325901_60min_R1 2 YNSHSLENESIKR 13 1 C9J2A2;Q13496-2;Q13496 C9J2A2 MTM1 Myotubularin 1 YNSHSLENES(1)IKR;YNSHSLENES(1)IKR 138.01 2.3746999999999997e-09 41825000.0 3811.6000000000004 3948.2 4804.0 4797.6 6162.7 5184.3 5065.5 5181.2 5352.6 5222.2 6302.0 True False 4198.550826048385 4280.928670209106 5130.028328798775 5093.936855859854 5729.85321216083 5142.080779649189 5258.2703744479595 5077.85690142723 5127.648836167899 4892.469400773775 5526.893951669468 0.7596582932046596 0.7745632008944187 0.9281937329825526 0.9216635782058323 1.0367221195604912 0.9303744245166778 0.9513970089582834 0.9187541765467382 0.9277632031674913 0.8852113761466227 1.0 12.432253215493814 -5.793690995633828 2.690605541746938 0.9605717912352181 0.7550590881215966 0.7298646861303947 0.04106051358065639 0.08762635415934866 1.246066572344239 0.005384642454427472 0.024488993897860925 1.6080850127807015e-06 5.793690995633828 -0.20551270311362146 YNSNLAT(ph)PIAIK ddPTM_A549_MK2206_60min_R1 2 YNSNLATPIAIK 12 0 Q8IX90 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 YNS(0.001)NLAT(0.999)PIAIK;YNS(0.013)NLAT(0.987)PIAIK 94.53200000000001 0.00027715 10472800.0 7328.5 8376.7 9098.400000000001 8900.4 12045.099999999999 9617.900000000001 9563.7 10063.5 14070.900000000001 11911.0 14347.8 True False 8565.371635377305 8803.03825022146 10388.689931615467 11080.998399554144 10273.281746047485 10635.659794154684 11301.300495462057 11490.0319431762 10883.863616610073 9220.296827451235 10784.845280864825 0.7942044055629194 0.8162414963745825 0.9632674054256259 1.0274601175053268 0.9525664465743436 0.9861671185051829 1.047887123194392 1.0653868130646773 1.0091812476828883 0.8549308392778231 1.0 13.396717859327358 -5.803024292164681 3.0311288664870095 1.0080267108829393 0.7952840768694385 0.6283409037534073 0.0542728465161712 0.058214003022085785 1.0642881916696747 0.00413776981089449 0.017336614789256216 1.573894826549056e-06 5.803024292164681 -0.2127426340135008 YNSNLAT(ph)PIAIK ddPTM_A549_PD325901_60min_R1 2 YNSNLATPIAIK 12 0 Q8IX90 Q8IX90 SKA3 Spindle and kinetochore-associated protein 3 1 YNSNLAT(1)PIAIK;YNSNLAT(1)PIAIK 128.96 8.8058e-08 15893600.0 10166.400000000001 11301.5 12005.2 12930.0 13278.9 12809.0 13328.599999999999 13946.3 13151.6 12950.599999999999 13042.599999999999 True False 11198.485443891888 12253.917067617705 12819.94506513218 13728.656733839402 12346.23587371809 12704.687750810412 13835.82716668978 13668.130105839295 12598.88398792096 12132.896905836773 11438.442883853415 0.9790218439346974 1.0712924120918084 1.1207771193427825 1.200220770715118 1.0793633363459043 1.1107008077772926 1.20959009081739 1.1949292613187168 1.1014509680951097 1.060712286544146 1.0 13.481603050840567 -10.135598881169177 0.953204371855307 1.0094907788632708 1.1216313019061472 0.19608446922604705 0.0656494005040287 0.4537295707287118 0.8220274133785241 0.02750472701868914 0.012728858356273106 7.318146829753373e-11 10.135598881169177 0.11214052304287647 YNT(ph)LPSR ddPTM_A549_PD325901_60min_R1 1 YNTLPSR 7 0 Q96PY5-3;Q96PY5 Q96PY5-3 FMNL2 Formin-like protein 2 1 YNT(0.966)LPS(0.034)R 72.275 0.021072 11629000.0 4102.5 3840.8 4314.2 4163.6 4373.4 3559.1 3794.7 4117.6 4388.6 4699.1 4694.2 True False 4518.982779899124 4164.477695288774 4606.987555392106 4420.776115778326 4066.227471410935 3530.115869615846 3939.1093850395164 4035.4712378052886 4204.162403767599 4402.398024046577 4116.843158985531 1.097681550008985 1.0115706463578227 1.1190583117884325 1.073826702902058 0.9877052183870253 0.8574812625326572 0.9568276548116514 0.980234388817403 1.0212102432397705 1.0693625805097253 1.0 12.0073227714403 -6.76000432098091 24.5207435242658 0.9908283283050172 1.074074346821371 0.39955807725563897 0.05454098697639051 26.216693495756587 447942.45996072446 0.007765226727546644 0.015500497649756495 1.7377835387142407e-07 6.76000432098091 0.08324601851635371 YNTEGRVS(ph)PSPSQESLSSSK ddPTM_A549_MK2206_60min_R1 2 YNTEGRVSPSPSQESLSSSK 20 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 YNT(0.001)EGRVS(0.937)PS(0.062)PSQESLSSSK;YNTEGRVS(0.999)PS(0.001)PSQESLSSSK 190.33 1.2399999999999998e-44 69823000.0 17237.0 12929.0 11977.6 10404.099999999999 14413.099999999999 10230.8 11100.6 9796.8 15445.300000000001 17768.1 16562.3 True False 20146.184195810692 13587.030875776052 13676.203785821393 12953.104967057787 12292.95208291812 11313.416465344586 13117.435331506227 11185.526401441703 11946.964211075874 13754.273869518614 12449.423813774063 1.618242297568898 1.0913782901939075 1.0985411044236457 1.0404581899385938 0.9874314078148081 0.9087502068029368 1.053658026887403 0.8984774370895798 0.9596399311153447 1.104812084098291 1.0 13.603791352345073 -2.396751805141216 0.9585287869481969 0.9779262890144934 199.9999999999983 0.8805139169905559 0.06454276814649207 90.14021563918942 0.33905713863699327 0.007287156372602815 39087.49540980458 0.004010958743344896 2.396751805141216 199.0220737109838 YNTEGRVS(ph)PSPSQESLSSSK ddPTM_A549_PD325901_60min_R1 2 YNTEGRVSPSPSQESLSSSK 20 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 YNTEGRVS(1)PSPSQESLSSSK;YNTEGRVS(0.674)PS(0.28)PS(0.047)QESLSSSK 239.47 6.926099999999999e-86 94136000.0 10066.8 10450.5 11429.7 11048.9 13224.599999999999 10482.0 11842.4 12547.1 14106.2 12433.8 12991.7 True False 11088.77412521353 11331.200311032937 12205.388174369555 11731.365459127474 12295.749718393252 10396.638067296026 12293.069012409936 12296.838247490463 13513.36546963188 11648.72774603441 11393.803261171732 0.9732285059723917 0.9945055264950786 1.0712303780041188 1.0296268234774686 1.0791611401870709 0.9124817963748868 1.0789258626487574 1.0792566771269547 1.1860276292187069 1.0223739588107004 1.0 13.475961779813748 -7.968003109148265 24.990091371887605 1.0891536091692375 1.014443065996782 0.1868086381443117 0.06181087953756949 260.02998916472205 203087.0912166849 0.011981833982981482 0.01655521701710251 1.0764575071585106e-08 7.968003109148265 -0.07471054317245551 YNTLPS(ph)R ddPTM_A549_MK2206_60min_R1 1 YNTLPSR 7 0 Q96PY5-3;Q96PY5 Q96PY5-3 FMNL2 Formin-like protein 2 1 YNT(0.033)LPS(0.967)R 70.908 0.020912 11553000.0 2437.2 1988.6 2571.8 2219.6 2815.3 2484.3 1813.0 2227.9 2679.7 3216.6 2909.2 True False 2848.539776180878 2089.81124600265 2936.5199118667756 2763.4020996416307 2401.17309940536 2747.1869770551257 2142.3986321478824 2543.7116476575984 2072.752228601583 2489.9678259742795 2186.7653501646214 1.3026270861509845 0.9556632337554313 1.3428600885987663 1.2636939301391434 1.0980478994806635 1.256278812378436 0.979711257994188 1.1632302695239367 0.9478622059040511 1.1386534114356772 1.0 11.094582705635199 -8.120431788999513 1.061354579287934 0.9770370229703152 1.1989178555214695 0.1884609829027838 0.12569560206471933 0.3273309931147436 0.7284816748999855 0.02053645261981028 0.02893978548229678 7.578237485546167e-09 8.120431788999513 0.2218808325511542 YNVS(ph)TTPYLQSVK ddPTM_A549_PD325901_60min_R1 1 YNVSTTPYLQSVK 13 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 Y(0.021)NVS(0.386)T(0.386)T(0.208)PY(0.001)LQSVK 104.22 0.0001151 2165600.0 3070.8 3088.5 2709.9 2952.0 3617.9 3340.4 3066.4 3421.7 3267.7 3241.7 3153.4 True False 3382.545355396523 3348.778734091692 2893.810109952496 3134.3383355215706 3363.7911850774303 3313.19688990609 3183.0935299984653 3353.4515092282795 3130.3699327328472 3037.0185087680175 2765.5517910495882 1.2230996238594296 1.210889900861613 1.0463771169710154 1.1333500770679907 1.2163182754211943 1.198023808712929 1.1509795406111019 1.2125795365978558 1.1319151363803612 1.0981600556521856 1.0 11.4333516446117 -10.090781005899368 0.6769633711129344 1.0018193397011586 1.1716701307579982 0.36846402911539755 0.0567671615456105 0.3676132305565748 0.3284058150338039 0.031036701124981456 0.011424741102659704 8.113700901556107e-11 10.090781005899368 0.16985079105683965 YNVST(ph)TPYLQS(ph)VK ddPTM_A549_PD325901_60min_R1 1 YNVSTTPYLQSVK 13 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 2 Y(0.001)NVS(0.075)T(0.505)T(0.421)PY(0.212)LQS(0.785)VK 56.599 0.023393999999999998 2407800.0 1269.4 1387.0 1188.1 1336.6 1384.6 1279.5 1590.9 1376.8 1629.9 1536.5 1388.6 True False 1398.2685535171101 1503.8873576769233 1268.7316106256912 1419.1587463611559 1287.3504726106876 1269.0801762168735 1651.4425700738839 1349.338643921294 1561.40097112993 1439.485127779269 1217.8110030606515 1.1481819017917603 1.2349103053735704 1.041813226713393 1.165335789210698 1.0571020210650641 1.0420994497728877 1.3560746010041067 1.1080033277167656 1.2821373490679213 1.1820267054259628 1.0 10.250074537689562 YNVSTT(ph)PYLQSVK ddPTM_A549_MK2206_60min_R1 2 YNVSTTPYLQSVK 13 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 YNVS(0.029)T(0.189)T(0.756)PY(0.026)LQSVK;YNVS(0.027)T(0.158)T(0.623)PY(0.192)LQS(0.001)VK 90.73100000000001 0.00019494 4646400.0 3484.2 3706.4 3737.2 3291.3 5388.4 4014.9 3116.7 3412.0 5337.4 5413.5 5313.200000000001 True False 4072.247779488518 3895.0399286856195 4267.19115585524 4097.668647752069 4595.773497970319 4439.754053125075 3682.964046781745 3895.6614488117652 4128.487422076382 4190.586590160967 3993.785803139923 1.0196460151385456 0.9752751200686154 1.0684576905702767 1.026011120709196 1.1507310918770637 1.111665540408935 0.9221736538514886 0.9754307418662733 1.0337278025352679 1.0492767506124938 1.0 11.963541244125384 -7.738012903579804 24.99997698184981 1.0062577929461571 1.0579924630702395 0.2429920593381102 0.05359024333574328 327.5025491119721 349499.3747067748 0.008473942761208463 0.012564614004666318 1.8280459011846172e-08 7.738012903579804 0.051734670124082394 YPDIAS(ph)PTFR ddPTM_A549_MK2206_60min_R1 2 YPDIASPTFR 10 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 Y(0.014)PDIAS(0.948)PT(0.038)FR;YPDIAS(0.988)PT(0.012)FR 130.01 1.2758e-06 21504000.0 6076.5 5715.299999999999 5815.2 6194.9 8044.4 6560.4 6190.6 7016.1 7657.1 7904.2 8003.299999999999 True False 7102.06464383846 6006.184357979957 6639.882802507062 7712.650778099625 6861.079416352238 7254.617173558927 7315.351887575659 8010.653660905102 5922.779075876096 6118.635730294691 6015.859730156917 1.1805568883590327 0.9983916891997234 1.1037296579941813 1.2820529606827202 1.1404985694660261 1.2059152804365167 1.2160110467510594 1.331589169333267 0.9845274560152696 1.0170841749555044 1.0 12.554555213219153 -8.798693066419977 24.99908353260987 0.992693434580843 1.1774278642359983 0.4836586987205832 0.08344092488394973 99.41886914571154 66714.60768704403 0.014807760550857203 0.015764250025304936 1.589669836035513e-09 8.798693066419977 0.1847344296551553 YPDIAS(ph)PTFR ddPTM_A549_PD325901_60min_R1 2 YPDIASPTFR 10 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 YPDIAS(0.5)PT(0.5)FR;YPDIAS(0.74)PT(0.26)FR 126.71 4.636e-06 26167000.0 3837.1 3948.5 3957.1 3866.5 3978.5 4199.3 3680.0 3906.9 4005.5 3812.8 4002.0 True False 4226.639567276278 4281.253952261955 4225.652601975359 4105.32492354138 3699.0638850798973 4165.102293073478 3820.0444137732693 3828.9738145962433 3837.1627645014637 3572.0591573034817 3509.7793707682026 1.204246512609473 1.2198071445513388 1.2039653082382982 1.1696817633989418 1.053930601988314 1.1867134235739272 1.0884001557445924 1.090944304501447 1.0932774853199976 1.0177446443084106 1.0 11.777164628382016 -2.000000000331693 0.07301287490337262 0.8563965362293042 1.818411446232549 0.776832063274745 0.03569416357890419 58.453483884725294 0.3051265425394851 0.6609557749631062 5.736247056050937 0.009999999992362488 2.000000000331693 0.9620149100032447 YPDIAS(ph)PTFRR ddPTM_A549_PD325901_60min_R1 1 YPDIASPTFRR 11 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;A0A2R8YFX5;H0YHA8 Q8IVL0-3 NAV3 Neuron navigator 3 1 YPDIAS(0.616)PT(0.384)FRR 72.681 0.00077608 6962700.0 1835.8 1772.4 1978.0 1945.9 2070.7 2021.2 2192.7 2140.0 2333.4 2433.1 2490.9 True False 2022.1690645554697 1921.7663682383418 2112.2389746802596 2066.0938235404565 1925.2611755271926 2004.7400173267242 2276.1443983914783 2097.3160212024777 2235.33531261708 2279.4736507645566 2184.53509111607 0.9256747912995766 0.8797141213495084 0.9669054909075072 0.9457819340795747 0.8813139158792751 0.917696413062658 1.041935379133052 0.9600743104250011 1.023254477214672 1.0434593886976578 1.0 11.093110565254252 -7.748621246342519 24.999462774218305 1.0087428167303483 0.9193170480581478 0.6868554079590707 0.031598858225901194 97.8020381406222 190744.85372927698 0.004445552653139438 0.006570145718405008 1.783933880314743e-08 7.748621246342519 -0.08942576867220042 YPDPLIK ddPTM_A549_PD325901_60min_R1 2 YPDPLIK 7 0 P62701;Q8TD47 P62701 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 0 ; 83.84299999999999 0.011262000000000001 3584400.0 2545.9 2273.4 2436.4 2043.7 3158.2 2094.9 2801.5 2570.6 2900.0 2342.1 2690.7 False True 2804.357893807476 2464.987396497993 2601.7487552633897 2169.934707420539 2936.3789271985243 2077.8398289618804 2908.1126155396214 2519.3273664033113 2778.123085021654 2194.219406294714 2359.7609577526237 1.188407615862191 1.0445919907267152 1.1025475892868526 0.919557000166292 1.2443543985044387 0.8805297935519546 1.232375934513822 1.0676197341626732 1.1772900453728448 0.9298481691910154 1.0 11.204425007583286 -11.142169590956346 1.5325348402661358 1.0002768054602305 1.1024227887331333 0.14433821811020586 0.11399479695835875 0.7156166206239774 3.0254105829127202 0.07300695205431477 0.01582066213286725 7.208259434102761e-12 11.142169590956346 0.10214598327290281 YPDVAS(ph)PTLR ddPTM_A549_MK2206_60min_R1 1 YPDVASPTLR 10 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;E9PNV5;Q8IVL1-5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.971)PT(0.029)LR 126.71 4.6237e-06 11806000.0 1270.1 2083.3 1517.9 1613.9 1930.7 1900.1 1779.8 2035.1 2289.2 2399.2 2104.4 True False 1484.4618290363262 2189.331071506244 1733.161044491241 2009.3055724507237 1646.6965875828246 2101.1673208156985 2103.166621895642 2323.581657232363 1770.6998551012198 1857.2190536832345 1581.819401514652 0.9384521568106307 1.3840588055816463 1.095675677534157 1.270249669795893 1.0410142814066197 1.328323144098341 1.3295870690938423 1.4689298000817572 1.119407091230331 1.1741030941363324 1.0 10.627369179408172 -9.094613320417343 3.5113120969790477 1.0467118543276837 1.236131334364075 0.10995497405840049 0.1547326073712516 0.2192881209763618 5.631246122120501 0.027036589317318158 0.02657069624759521 8.042418704177778e-10 9.094613320417343 0.1894194800363913 YPDVAS(ph)PTLR ddPTM_A549_PD325901_60min_R1 2 YPDVASPTLR 10 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;E9PNV5;Q8IVL1-5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.769)PT(0.231)LR;YPDVAS(0.723)PT(0.277)LR 127.83 1.5278e-06 49388000.0 4161.2 4583.2 4462.0 4450.8 4598.0 4393.1 4213.3 4221.5 5066.6 4937.9 4991.4 True False 4583.6419606864665 4969.442348741801 4764.818152185705 4725.715807499797 4275.052342238872 4357.324050127662 4373.639437106226 4137.298870797318 4853.668421576113 4626.120151292711 4377.4894430915565 1.0470937783574223 1.135226575265521 1.088481928769793 1.0795493327705912 0.976599120983753 0.9953933885561463 0.9991204990816354 0.9451305193497836 1.1087790124168204 1.0567975574660808 1.0 12.095887984070703 -6.546072510630106 23.86714023706881 1.0315286093115017 1.0929720759747907 0.32962885002144127 0.0470478851571672 170.01583524630834 174951.1365250549 0.00822239157524153 0.017117239281516507 2.8439862304726996e-07 6.546072510630106 0.06144346666328904 YPDVAS(ph)PTLRR ddPTM_A549_MK2206_60min_R1 2 YPDVASPTLRR 11 1 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;E9PNV5;Q8IVL1-5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.999)PT(0.001)LRR;YPDVAS(0.999)PT(0.001)LRR 117.7 7.088e-06 41699000.0 4041.6 3959.0 3585.5 3326.3 5569.4 3892.1 3703.0 3644.5 6264.1 5765.5 5666.7 True False 4723.72327236691 4160.496189743785 4093.977814759436 4141.243649323283 4750.148637739569 4303.9594386331155 4375.787167591619 4161.119035813153 4845.291351712196 4463.069545686348 4259.501997036248 1.1089848709200434 0.9767564829500371 0.9611400153370081 0.9722365788781765 1.115188733576064 1.0104372392894287 1.0273001798417474 0.9769027080415621 1.1375253151855635 1.0477913964570837 1.0 12.056469051168472 -8.73279091144183 24.999937897306086 1.0649425700960538 1.0169966701551205 0.09931706720995281 0.057511190376171535 383.6186490145747 334762.7746517521 0.011366297464575582 0.012887134338409273 1.850159152977683e-09 8.73279091144183 -0.047945899940933234 YPDVAS(ph)PTLRR ddPTM_A549_PD325901_60min_R1 2 YPDVASPTLRR 11 1 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;E9PNV5;Q8IVL1-5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.998)PT(0.002)LRR;YPDVAS(0.996)PT(0.004)LRR 106.29 6.6799e-05 75975000.0 3700.7000000000003 3756.9 3266.7 4295.2 4572.4 4130.2 3957.8 4773.1 5138.2 4635.3 4539.6 True False 4076.3923396886485 4073.5071478416967 3488.3979062628946 4560.5047488930395 4251.250397923669 4096.565020563444 4108.416244791261 4677.896776075487 4922.259322571816 4342.626366934752 3981.2579788953863 1.0238955529376816 1.0231708594206461 0.8762049394324259 1.1454934026049644 1.0678158563096163 1.0289624641958144 1.0319392178477105 1.1749795669793257 1.236357791598703 1.0907673880856192 1.0 11.959008643359445 -6.79223579832766 0.8755972833971083 1.1122285956667797 0.9876914289164682 0.2184827411968997 0.0818467068730728 0.8864634058999855 1.2588447319593414 0.01767618920571658 0.06333144832621065 1.6134822856721993e-07 6.79223579832766 -0.12453716675031146 YPDVASPT(ph)LR ddPTM_A549_MK2206_60min_R1 1 YPDVASPTLR 10 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;E9PNV5;Q8IVL1-5 A0A0A0MTL4 NAV2 Neuron navigator 2 1 YPDVAS(0.297)PT(0.703)LR 127.87 1.6145e-06 12105000.0 2316.1 2336.7 2577.4 1652.1 3045.4 2099.6 1925.0 2117.7 3668.0 3195.5 3487.3 True False 2707.0010567916165 2455.6280491473353 2942.914076073342 2056.8645741655864 2597.425694216987 2321.7782783983166 2274.7475823963987 2417.890460184252 2837.2038565923795 2473.634330628864 2621.307165416295 1.0326912818558265 0.9367952300841295 1.122689517237852 0.7846713278407156 0.9908894800600312 0.8857330071920779 0.8677913112998878 0.9223987528375989 1.082362225238032 0.9436644294359228 1.0 11.356070703592755 -8.75231704499396 24.998288437595665 1.0388932739003645 0.94065164597242 0.06900027547494403 0.09025533852853682 216.30903050566556 592759.2614538089 0.0142238779207633 0.01601862202922224 1.7688172094898147e-09 8.75231704499396 -0.09824162792794444 YPEGYRT(ph)LPR ddPTM_A549_MK2206_60min_R1 2 YPEGYRTLPR 10 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 YPEGYRT(1)LPR;YPEGYRT(1)LPR 114.82 3.6796e-05 73947000.0 4357.9 3691.3 4120.799999999999 2957.6000000000004 4985.8 4182.7 3814.3 3984.7 6035.5 5868.2 5900.4 True False 5093.406979574369 3879.1714031829324 4705.191404005209 3682.212132771708 4252.395424649325 4625.31053774845 4507.308936901087 4549.543427631957 4668.468886713011 4542.569544358097 4435.167837244373 1.148413581286017 0.8746391445680016 1.0608823784510046 0.8302306176217931 0.9587901925468942 1.0428715907676258 1.016265697782823 1.0257883341927025 1.052602530057485 1.024215928473285 1.0 12.114772985215154 -7.255411473938585 24.0410074721709 1.025909925894655 0.9658122126597478 0.09088007835043954 0.0802797476104706 468.61262326279603 1868957.4151608667 0.010747567483936125 0.018304193638948963 5.5537781312336554e-08 7.255411473938585 -0.06009771323490709 YPEGYRT(ph)LPR ddPTM_A549_PD325901_60min_R1 2 YPEGYRTLPR 10 1 B4DJX4;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;A0JP02;Q9HAU0-3 B4DJX4 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 Y(0.001)PEGYRT(0.999)LPR;YPEGYRT(1)LPR 122.64 1.3799000000000001e-05 118698000.0 6406.7 6756.700000000001 7229.5 7335.5 7268.0 8050.1 8104.7 8072.5 8335.8 8171.6 9232.5 True False 7057.1034676367335 7326.110821640717 7720.137344515138 7788.59717487076 6757.5207532388295 7984.542654602149 8413.12879356201 7911.487654746263 7985.475314525352 7655.643781426019 8096.961029639536 0.8715743402745394 0.9047975894688065 0.9534610968553502 0.9619160999244053 0.8345749384864786 0.9861159792388934 1.0390477072527726 0.9770934583710686 0.9862311656551042 0.9454959401931117 1.0 12.98316481856925 -7.4852566319275 23.75145580894108 0.9957139483671266 0.910991854784502 0.5295457020487113 0.03894430614604324 167.0716219866612 105474.9298676005 0.005152469780103215 0.008235016859015665 3.2714732088593366e-08 7.4852566319275 -0.08472209358262461 YPEPERPS(ph)SR ddPTM_A549_MK2206_60min_R1 2 YPEPERPSSR 10 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 YPEPERPS(0.598)S(0.402)R;YPEPERPS(0.568)S(0.432)R 61.641000000000005 0.0020691 178918000.0 4023.4 4717.700000000001 4205.7 3910.1000000000004 5487.0 4325.0 4026.9 3774.3999999999996 5379.6 5733.2 5962.9 True False 4702.451557314188 4957.8107790740705 4802.131500636943 4868.074675531058 4679.869568584951 4782.668629297351 4758.535604962109 4309.4327586152185 4161.129189455934 4438.0661381196705 4482.147362332123 1.0491514841376028 1.1061240022448646 1.0713908116886028 1.086103218390868 1.0441132765768661 1.0670485021288687 1.0616642471313522 0.9614661032414075 0.9283784876030584 0.9901651550810422 1.0 12.129974366667657 -8.237575237532779 5.463312064066512 0.964775690555816 1.0709125304678944 0.8082308236171039 0.0232444517837447 0.06855134764685605 6.5034352019800306 0.004768925834440103 0.006077171378785998 5.786617318313695e-09 8.237575237532779 0.10613683991207834 YPEPERPS(ph)SR ddPTM_A549_PD325901_60min_R1 1 YPEPERPSSR 10 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 YPEPERPS(0.606)S(0.394)R 56.205 0.004365 129530000.0 9013.3 7882.1 8942.8 9354.9 10758.0 9034.5 9638.2 9548.4 9532.9 9868.6 9122.2 True False 9928.323580759241 8546.352229232354 9549.71218542499 9932.7309264806 10002.395193085213 8960.926027378928 10004.986975225414 9357.949671425105 9132.265364552732 9245.494911814194 8000.227230390234 1.2410051983329677 1.0682636859072667 1.1936801181282417 1.2415561009004121 1.2502638868917875 1.1200839387835528 1.2505878504575167 1.1697104847069006 1.14150074761155 1.1556540390119918 1.0 12.965825262099774 -10.017343212297499 0.5871721915317706 0.9974220822362152 1.1936051592252983 0.17556014868804282 0.07048684334743896 0.4008565693471573 0.26988263594152284 0.036947306951993227 0.013062384658779614 9.608526399417388e-11 10.017343212297499 0.1961830769890831 YPEPERPSS(ph)R ddPTM_A549_PD325901_60min_R1 1 YPEPERPSSR 10 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 YPEPERPS(0.285)S(0.715)R 51.568999999999996 0.0069467 95049000.0 4183.8 4823.6 3871.7 4039.2 4487.7 5086.5 4458.0 5064.0 4903.0 5022.3 4538.6 True False 4608.536296049228 5230.10170042567 4134.456844423438 4288.69221031122 4172.499433724531 5045.077230423703 4627.651629511206 4962.994547368853 4696.943960641782 4705.191120888922 3980.380972555862 1.1578128646037664 1.3139701291123758 1.0387088253435806 1.0774577207260105 1.0482663500035039 1.2674860183506966 1.1626152525143143 1.2468642025946677 1.180023719595314 1.1820956720802653 1.0 11.958690806112694 -10.63313786935674 0.9317364076027784 1.0009815503110426 1.1652221101807807 0.0 0.0987831903415123 0.5188527322295422 0.8103474821715333 0.05586092062502922 0.015457331266728493 2.327352308597982e-11 10.63313786935674 0.16424055986973807 YPESNRT(ph)PVKPSS(ph)VEEEDSFFR ddPTM_A549_MK2206_60min_R1 1 YPESNRTPVKPSSVEEEDSFFR 22 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 2 Y(0.003)PES(0.064)NRT(0.925)PVKPS(0.229)S(0.733)VEEEDS(0.047)FFR 53.895 0.0036838 4452200.0 1219.9 1823.4 1798.9 1492.4 2457.6 1736.7 1746.9 1997.4 2893.6 2695.5 3173.4 True False 1425.7892963084896 1916.2032716288993 2054.0110698565754 1858.038066996383 2096.090295563035 1920.4764412718398 2064.289117760141 2280.537566780955 2238.2042201296936 2086.5846778939463 2385.357198615568 0.5977256979105687 0.8033192147243357 0.8610916096963165 0.7789349402574866 0.8787322488973894 0.8051106318108083 0.8654004184187714 0.9560570501158279 0.9383098772077908 0.8747472617958326 1.0 11.219989605435877 -3.074403731440619 0.1750570061708688 1.020500754336018 1.3062061673318226e-18 0.619493200156543 0.06340622609446922 12.314836582869786 0.17719294477305642 0.06224888330214162 3.108318941368379 0.0008425511361434507 3.074403731440619 -1.020500754336018 YPESNRT(ph)PVKPSSVEEEDSFFR ddPTM_A549_MK2206_60min_R1 2 YPESNRTPVKPSSVEEEDSFFR 22 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 YPES(0.242)NRT(0.757)PVKPS(0.001)SVEEEDSFFR;YPES(0.249)NRT(0.749)PVKPS(0.001)SVEEEDSFFR 168.17 1.7813000000000002e-40 235600000.0 5659.5 5835.9 5827.2 5696.8 6958.4 6090.0 5756.8 6045.200000000001 9417.9 8079.9 8515.2 True False 6614.685238509632 6132.922382855704 6653.58458294971 7092.516255739071 5934.82857773674 6734.439757785171 6802.73604277381 6902.125612648553 7284.760687295902 6254.64497826574 6400.640832435646 1.0334410899904432 0.9581731803754302 1.0395185040273243 1.1080947113603536 0.9272241222568882 1.05215086021668 1.062821086335687 1.0783491518023636 1.1381298963659894 0.9771904317095778 1.0 12.644000639695603 -7.50652282662229 24.086055071019985 1.0674602230426042 1.014225811853414 0.06482610853460724 0.05905722877872805 718.2585934593229 1057721.964888418 0.009544504111141907 0.014995188036040857 3.1151371593134e-08 7.50652282662229 -0.053234411189190256 YPESNRT(ph)PVKPSSVEEEDSFFR ddPTM_A549_PD325901_60min_R1 4 YPESNRTPVKPSSVEEEDSFFR 22 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 YPES(0.002)NRT(0.997)PVKPSSVEEEDSFFR;YPES(0.201)NRT(0.79)PVKPS(0.004)S(0.004)VEEEDSFFR;YPES(0.303)NRT(0.694)PVKPS(0.002)S(0.001)VEEEDSFFR;YPES(0.05)NRT(0.798)PVKPS(0.076)S(0.076)VEEEDSFFR 203.19 3.6325e-61 387666000.0 13025.599999999999 13569.199999999999 13078.899999999998 13936.8 15402.2 15301.0 14297.3 14582.6 14665.3 15154.900000000001 17102.1 True False 14347.94932306009 14712.724105111542 13966.512803814796 14797.644483230702 14320.402606705433 15176.393729030373 14841.391575282749 14291.738603171609 14048.968440954517 14198.017027648586 14998.650119144148 0.9566160427161702 0.980936550172095 0.9311846528100592 0.9865984182365263 0.9547794296786078 1.011850640455927 0.9895151535230043 0.9528683241253663 0.936682190020723 0.946619656760068 1.0 13.872545043333936 -6.334597061627875 24.999999998538062 0.9724308617616991 0.958710969337528 0.07566872786499856 0.02468177775173402 385.7661747481822 131825.13089370547 0.004040719694143434 0.00938978448373191 4.628102175328881e-07 6.334597061627875 -0.013719892424171154 YPHVEDYRR ddPTM_A549_PD325901_60min_R1 1 YPHVEDYRR 9 1 A0A087WTV2;B3KQ25;K7ESG5;K9J957;P61289;P61289-3;P61289-2 A0A087WTV2 PSME3 Proteasome activator complex subunit 3 0 39.148 0.035241 2467300.0 279.89 344.62 233.92 293.59 299.09 321.94 131.67 243.36 236.39 167.72 399.37 False True 308.3042267558721 373.6623368439952 249.79521787523083 311.7243875087322 278.08295020448566 319.3182273788668 136.6807739025886 238.5059938877733 226.45535036836864 157.13013057672572 350.250021815017 0.8802404212802636 1.0668445783604927 0.7131911557943001 0.8900053335995738 0.7939555542736095 0.911686531021869 0.39023773130491324 0.680959254911165 0.6465534225947029 0.4486227574304429 1.0 8.452241330287823 -5.764439427189123 24.99949023550759 0.7907485442068106 0.9735425038605071 0.12969023213062814 0.19116984879124746 113.57125638102367 946434.1548184153 0.025899386189098646 0.08590370731957082 1.7201272376228899e-06 5.764439427189123 0.1827939596536965 YPIEHGIITNWDDMEK ddPTM_A549_MK2206_60min_R1 6 YPIEHGIITNWDDMEK 16 0 P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P68133 ACTA1;ACTC1;ACTG2;ACTA2 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;;;;; 142.91 3.1052e-14 125168000.0 23633.0 25773.3 21311.47 19126.06 37286.3 27503.58 25155.559999999998 24714.61 37179.5 36986.600000000006 36191.2 False True 27621.672628624103 27085.05088333506 24333.756904172715 23811.945558601474 31801.53466286295 30413.990580201178 29725.99963315718 28217.981652818784 28758.402613461385 28631.30137169068 27203.926213693747 1.0153561074842232 0.9956302142041965 0.894494298838516 0.8753128269630125 1.1690053271374807 1.1180000394535539 1.092709905167802 1.0372760693129137 1.0571416194690735 1.0524694541069013 1.0 14.731527263387303 -6.7428794376511725 24.999204563004334 1.0486059637195324 0.9451789434998854 0.49558168587675877 0.05935702441854084 214.55387680500465 288990.4059435617 0.009507624486684242 0.019762840118522085 1.807675876346592e-07 6.7428794376511725 -0.103427020219647 YPIEHGIITNWDDMEK ddPTM_A549_PD325901_60min_R1 8 YPIEHGIITNWDDMEK 16 0 P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P68133 ACTA1;ACTC1;ACTG2;ACTA2 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;;;;;;; 142.1 3.3322e-14 233625200.0 45484.6 43819.09999999999 41830.6 45933.0 47520.9 49818.4 43133.399999999994 43582.7 53571.5 54058.399999999994 60726.3 False True 50102.16310800722 47511.8893401448 44669.476063832204 48770.177088588185 44183.19592220512 49412.69546763787 44774.865140502116 42713.40885853325 51320.07615490951 50645.14339833575 53257.35007573245 0.9407558400251134 0.892118914526961 0.8387476282674934 0.9157454702353109 0.8296168671437126 0.9278098778360648 0.8407264927156879 0.8020190414617773 0.9636242900169063 0.9509512457213489 1.0 15.700693025752704 -8.915289318003381 7.126653295053644 0.984111129190447 0.8736433136731024 0.5073379840132191 0.04296014478837086 0.10947303494581798 7.740534778383929 0.007151840799519151 0.007579181188991581 1.2153760724900195e-09 8.915289318003381 -0.11046781551734453 YPIYPLT(ph)PK ddPTM_A549_MK2206_60min_R1 2 YPIYPLTPK 9 0 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 YPIY(0.001)PLT(0.999)PK;YPIYPLT(1)PK 78.934 0.0019003 2936000.0 5213.7 5447.200000000001 5888.6 5929.799999999999 8304.8 5691.4 5157.2 6018.3 8389.7 7871.3 8397.8 True False 6093.645097273203 5724.439213127645 6723.692026214592 7382.601266198841 7083.1749213020385 6293.660170354437 6094.196484121929 6871.412455270757 6489.4463455979 6093.167863144729 6312.394492510812 0.9653460512493097 0.9068570128054051 1.0651571339832697 1.1695405404332302 1.1221058711881364 0.9970321369840555 0.9654334011209599 1.0885587812078568 1.0280482871115149 0.9652704485395869 1.0 12.623971653924217 -10.07941989267392 0.821775970746484 1.001820011283085 1.03625482779114 0.055899195747798 0.07296028986590072 2.0304786821538983 2.736754672540745 0.03606151754660212 0.015672764877810615 8.32875538987968e-11 10.07941989267392 0.03443481650805502 YPIYPLT(ph)PK ddPTM_A549_PD325901_60min_R1 1 YPIYPLTPK 9 0 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 YPIYPLT(1)PK 68.557 0.03115 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YPMS(ph)ALLSR ddPTM_A549_MK2206_60min_R1 1 YPMSALLSR 9 0 O95197-7;O95197-2;O95197 O95197-7 RTN3 Reticulon-3 1 Y(0.018)PMS(0.96)ALLS(0.022)R 42.348 0.028033999999999996 256000000.0 8696.4 11566.0 10943.0 10984.0 14290.0 11635.0 12003.0 10742.0 15527.0 15642.0 15922.0 True False 10164.139713433198 12154.659997619758 12494.881948657792 13675.080493090492 12187.959929848526 12866.207977312066 14183.789730651417 12264.711395995299 12010.159291523956 12108.461336159196 11968.127975155057 0.8492672984892203 1.0155857309390346 1.044013063245667 1.1426248550716487 1.0183681153100823 1.0750393047284719 1.1851301857814278 1.0247811037328416 1.0035119374104415 1.0117255899415063 1.0 13.546909886703682 -2.008332262213609 9.068319345458674 1.024017441794797 0.0036562377066233775 0.0 0.08247186703714875 0.0 0.0 0.01073380275496263 0.0 0.009809971322005893 2.008332262213609 -1.0203612040881735 YPPS(ph)PAK ddPTM_A549_MK2206_60min_R1 7 YPPSPAK 7 0 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 1 Y(0.062)PPS(0.938)PAK;Y(0.004)PPS(0.996)PAK;Y(0.05)PPS(0.95)PAK;Y(0.366)PPS(0.634)PAK;Y(0.007)PPS(0.993)PAK;Y(0.02)PPS(0.98)PAK;Y(0.099)PPS(0.901)PAK 93.098 0.012192 225781000.0 78610.09999999999 83838.29999999999 78834.70000000001 73854.3 109194.79999999999 84295.7 83599.5 77408.8 125470.9 122153.59999999999 124152.0 True False 91877.56304757769 88105.31136766759 90014.64588849967 91948.60681544566 93132.38956947679 93215.81502304316 98788.44702054422 88381.73445450765 97051.9414858552 94559.01692064022 93321.63197911392 0.9845258928620169 0.9441038427980579 0.964563563447386 0.9852871715319385 0.9979721485187969 0.9988661047409196 1.0585803626178956 0.9470658900852499 1.0399726132905194 1.0132593581497078 1.0 16.509923916485658 -6.735868892278022 1.3646339616978944 1.0154933639515644 0.9618088292126199 0.31789328529742233 0.027790945308728172 0.3318167967301338 1.2287695600214952 0.004263837510482985 0.011768690235906853 1.8370928535183117e-07 6.735868892278022 -0.05368453473894452 YPPS(ph)PAK ddPTM_A549_PD325901_60min_R1 2 YPPSPAK 7 0 P30838;A8MYB8;I3L3I9 P30838 ALDH3A1 Aldehyde dehydrogenase, dimeric NADP-preferring 1 Y(0.02)PPS(0.98)PAK;Y(0.019)PPS(0.981)PAK 88.13600000000001 0.012822 281910000.0 94907.0 93027.0 92258.0 97128.0 111514.0 106240.0 99926.0 101020.0 108729.0 109798.0 116350.0 True False 104541.8887731594 100866.71176828479 98519.18267242225 103127.3759663072 103681.64134241536 105374.81666375962 103728.73861160515 99005.07685134314 104159.49824528255 102865.33554175602 102039.68760341834 1.0245218427114946 0.9885047096606924 0.9654986700402427 1.0106594638658264 1.016091324636141 1.0326846263318974 1.0165528829797223 0.9702604856664268 1.0207743740857278 1.0080914392990559 1.0 16.638770861656347 -6.407911329548682 18.116346678943753 1.0097953308697727 0.991682584765529 0.12436590350451426 0.019462685877000827 4.3221825806558245 668.1392529777629 0.0027451033430714276 0.006379076059829338 3.909207024171509e-07 6.407911329548682 -0.018112746104243738 YPPYTT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 YPPYTTPPR 9 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 YPPYT(0.036)T(0.964)PPR;YPPYT(0.004)T(0.996)PPR 112.89 0.00027565 90399000.0 10966.400000000001 10531.0 9490.3 8756.9 14488.2 10569.400000000001 10875.2 10348.9 16197.7 15686.099999999999 17341.3 True False 12817.260217261606 11066.98291846218 10836.167244571601 10902.340893112178 12357.004972402492 11687.846892600106 12851.083069131073 11815.888267177043 12528.946812411772 12142.599115530415 13034.9766144678 0.9832975229917524 0.8490220769693363 0.8313146670738409 0.8363912890347218 0.9479882732345823 0.8966526936172263 0.9858922995586644 0.906475601502985 0.9611790786418156 0.9315397698568239 1.0 13.670100374143548 -8.176228366488955 0.48822964733813146 0.992937294112989 0.87339812078446 0.2363320740162569 0.05134465661975878 0.571918544959611 0.30543357724597486 0.015549771414846094 0.023642935242350557 6.664562321976603e-09 8.176228366488955 -0.11953917332852904 YPPYTT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 YPPYTTPPR 9 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 YPPYT(0.022)T(0.978)PPR;YPPYT(0.003)T(0.997)PPR 113.1 0.00026679 107134000.0 14149.1 13843.5 14545.5 13746.599999999999 16870.300000000003 14765.5 14334.3 15456.1 15584.5 15599.8 17384.7 True False 15585.50621598311 15010.140328767471 15532.645099197038 14595.696261206234 15685.38832737548 14645.254663485928 14879.799630529926 15147.815960424112 14929.537661558606 14614.825965721473 15246.492110693147 1.022235547877416 0.9844979566309611 1.0187684476157763 0.9573150436991027 1.0287867014586596 0.9605655226892788 0.9759490591343276 0.9935279440311501 0.9792113197689425 0.9585697391645482 1.0 13.896189727362382 -2.000000047777851 0.9326571870665525 0.9885823071151155 20.449046471280568 0.16234829807548867 0.022655234385812854 1409.9566331494875 2.525303196744777 0.0028337038357389936 58511.17085016576 0.009999998899874385 2.000000047777851 19.46046416416545 YPQLLPGIR ddPTM_A549_MK2206_60min_R1 2 YPQLLPGIR 9 0 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ; 77.67399999999999 0.005246 2456300.0 1384.85 1711.1599999999999 1700.92 1296.6399999999999 1684.15 1595.02 1416.02 1585.0300000000002 1804.96 2050.21 2143.93 False True 1618.5788236681806 1798.2507350447015 1942.1360325423566 1614.316858208382 1436.4137659800151 1763.8039577114143 1673.292504740234 1809.7128564507937 1396.1394419288404 1587.0661370673154 1611.5330115421552 1.0043721177757834 1.11586341835087 1.2051481531140533 1.001727452460662 0.8913337522049518 1.094488257503049 1.0383234428061627 1.122975975973952 0.866342440352994 0.9848176399120572 1.0 10.654218026333117 -8.759573377740088 24.99998364636114 0.9368839306828922 1.058986071836715 0.24991012365307375 0.0831244378303975 48.19958800088175 645759.6537090456 0.015529336174375429 0.017175169894324587 1.7395087684323385e-09 8.759573377740088 0.12210214115382279 YPQLLPGIR ddPTM_A549_PD325901_60min_R1 2 YPQLLPGIR 9 0 P23526-2;P23526 P23526-2 AHCY Adenosylhomocysteinase 0 ; 86.794 0.0032278 5128000.0 2178.98 2306.81 2159.6499999999996 2608.0 2554.5 2549.7 2484.91 2727.71 2947.4 2721.89 2878.2799999999997 False True 2400.188445519706 2501.2129744503986 2306.2168360304468 2769.090236802254 2375.080732546586 2528.9360885503406 2579.4746098449255 2673.3036842029014 2823.531027859594 2550.0294008793467 2524.2698069202156 0.9508446517641086 0.9908659397634091 0.9136174071836605 1.0969866332080944 0.9408981266722631 1.0018485669072825 1.0218696126592202 1.059040391353616 1.1185535793832189 1.010204770460159 1.0 11.301650405878975 -7.903241052702914 2.298649625619401 1.0575163019007703 0.9819800172830296 0.2455935684126106 0.052370267479402786 0.3113278727358136 3.3505800579875276 0.009415741501981179 0.013509549975678247 1.249565273544688e-08 7.903241052702914 -0.07553628461774065 YPQQYQPS(ph)PLPVHYELLTDGYTR ddPTM_A549_PD325901_60min_R1 2 YPQQYQPSPLPVHYELLTDGYTR 23 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 Y(0.001)PQQY(0.026)QPS(0.965)PLPVHY(0.007)ELLTDGYTR;Y(0.002)PQQY(0.098)QPS(0.899)PLPVHY(0.002)ELLTDGYTR 61.136 0.00028363 4724900.0 2366.54 2557.95 2578.61 2263.64 3105.8999999999996 2776.54 2488.84 2930.44 2938.2799999999997 3256.34 2925.31 True False 2606.7893986453305 2773.5174236263056 2753.6099810415903 2403.4599017005576 2887.7522987733187 2753.9287787989024 2583.554168145505 2871.990075314294 2814.7943097439415 3050.734136669538 2565.515415067949 1.0160879889222136 1.081076109438558 1.073316482477132 0.9368331554682553 1.1256031758035003 1.073440745132285 1.0070312394038288 1.1194592940063186 1.097165229728074 1.1891310879489445 1.0 11.32503297874541 YPS(ph)PQK ddPTM_A549_MK2206_60min_R1 2 YPSPQK 6 0 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 Y(0.014)PS(0.986)PQK;Y(0.014)PS(0.986)PQK 85.38 0.017797 67848000.0 11239.0 10961.0 10354.0 9483.5 13379.0 10866.0 10088.0 9792.5 13855.0 14655.0 14661.0 True False 13135.868432831488 11518.86808178368 11822.352891931163 11806.957925730498 11410.966823054132 12015.832907732954 11920.859018812922 11180.616863273503 10716.864621888617 11344.425321660468 11020.269076984567 1.1919734755175149 1.0452438140408402 1.072782598078455 1.0713856298108821 1.0354526503246209 1.0903393396108256 1.0817212298118206 1.01455026053981 0.972468507531309 1.0294145489925368 1.0 13.427871829528575 -8.378966361891726 3.326407662055269 0.9871490631991079 1.0802778902357328 0.46335975428298715 0.04067558756450585 0.13456338305873497 2.8007491051468674 0.006157330314599128 0.007516085359032766 4.178627307866845e-09 8.378966361891726 0.09312882703662495 YPS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 YPSPQK 6 0 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 Y(0.006)PS(0.994)PQK;Y(0.028)PS(0.972)PQK 82.45200000000001 0.041672 232320000.0 24238.0 23389.0 24383.0 24382.0 28312.0 24560.0 25180.0 23825.0 24670.0 29763.0 27475.0 True False 26698.62391692748 25360.073113702638 26037.777006890203 25888.020764460343 26323.46279109766 24359.991502842055 26138.23867902469 23349.79168464907 23633.205692235955 27883.75910061465 24095.749178374896 1.1080221544175342 1.0524708290233378 1.080596283358486 1.0743812351638333 1.0924525565165686 1.0109663460766891 1.0847655528587117 0.9690419464361251 0.980803938374572 1.1572065634564026 1.0 14.55649103720023 -8.259162392476346 24.99999201884484 0.989039917735818 1.070070467573455 0.0 0.0563733898440032 78.16433618297981 858199.2133515378 0.003824764226511677 0.004818535330188945 5.50601775518786e-09 8.259162392476346 0.08103054983763691 YPSSIS(ph)SSPQKDLTQAK ddPTM_A549_MK2206_60min_R1 2 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPS(0.048)S(0.041)IS(0.357)S(0.301)S(0.254)PQKDLTQAK;YPS(0.006)S(0.005)IS(0.485)S(0.293)S(0.212)PQKDLTQAK 109.66 1.8542999999999999e-09 147398000.0 7687.4 8898.7 7548.200000000001 8044.7 10139.900000000001 8492.900000000001 8545.1 8128.299999999999 12226.9 11949.2 11808.5 True False 8984.845181114752 9351.605820579187 8618.648261432767 10015.651861140304 8648.334142244312 9391.613040869248 10097.634060434008 9280.511416874748 9457.526672347154 9249.867420920182 8876.123551979561 1.0122487737466141 1.0535686852278643 0.9709923719471693 1.1283813032217882 0.9743368365253943 1.0580759704245803 1.1376175648413573 1.0455590621882453 1.0655019183726806 1.042106654639487 1.0 13.115714034056817 YPSSIS(ph)SSPQKDLTQAK ddPTM_A549_PD325901_60min_R1 1 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPS(0.001)S(0.001)IS(0.377)S(0.311)S(0.311)PQKDLTQAK 136.58 5.134e-13 18744000.0 11296.0 11208.0 10229.0 11474.0 11910.0 11151.0 10773.0 12362.0 10536.0 12643.0 13555.0 True False 12442.761604324316 12152.537494479415 10923.201451973911 12182.722920655322 11073.482687269465 11060.18995310227 11182.972410211803 12115.4302121986 10093.20855992695 11844.718822332117 11887.820932224631 1.04668144610047 1.0222678793501347 0.9188564930654448 1.0248070685209678 0.9314981063730765 0.9303799254850079 0.9407083496604347 1.0191464256798302 0.8490377351299954 0.9963742631943862 1.0 13.537196669201348 -4.271955341518311 0.5527636709235306 0.935422855583532 1.342381552198092 0.1630271791145228 0.05289812684940051 10.350514043888833 0.9548154202561083 0.011021240692655166 3.4864374062701673 5.346193314519112e-05 4.271955341518311 0.40695869661455997 YPSSISS(ph)SPQK ddPTM_A549_MK2206_60min_R1 1 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.002)S(0.617)S(0.381)PQK 138.63 1.7896e-08 11013000.0 3062.6 3009.0 3293.8 2655.5 3595.2 3299.0 3028.4 3318.1 4338.4 3747.6 3592.7 True False 3579.4920066188874 3162.1452475218616 3760.91036849941 3306.0976192099256 3066.350842532641 3648.097990301034 3578.6210797554586 3788.450836255075 3355.7593270011953 2901.0145571787625 2700.533436524278 1.325475907169612 1.1709335662185696 1.3926546206144703 1.2242387279844382 1.1354611652130433 1.350880511591191 1.3251534053810212 1.4028527790165048 1.2426283198775077 1.0742375998545362 1.0 11.399028695721524 -10.232010229410468 0.7984975731231247 1.0090859639162706 1.2849388380736435 0.5553758613137055 0.08475209599078141 0.30432839202648987 0.37388880857740003 0.045384831595862624 0.016785678538432967 5.861243587266819e-11 10.232010229410468 0.2758528741573729 YPSSISS(ph)SPQK ddPTM_A549_PD325901_60min_R1 2 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.005)S(0.861)S(0.134)PQK;YPSSIS(0.002)S(0.662)S(0.335)PQK 106.29 0.00015975 26620700.0 11545.7 12513.5 12208.2 13835.0 13000.7 13493.2 13363.0 14380.3 12754.0 13811.1 14974.1 True False 12717.810964504892 13568.056561132062 13036.72186587035 14689.556528435272 12087.575681980194 13383.315852856202 13871.536277514175 14093.473635372884 12217.993733229721 12939.064788982925 13132.380628640718 0.9684314919085057 1.0331757009495421 0.9927158094579026 1.118575294444213 0.9204405525391273 1.0191081290827204 1.0562849699361756 1.073184979472503 0.930371581416336 0.9852794519802308 1.0 13.680840850221344 -8.77007060964752 24.9934854512191 0.9671199164278748 1.0228683761707558 0.1564660483142033 0.05227023699650667 229.78783990292044 665396.0772357793 0.00911231730368897 0.009773608765469288 1.6979675664342496e-09 8.77007060964752 0.05574845974288101 YPSSISSS(ph)PQK ddPTM_A549_MK2206_60min_R1 1 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.001)S(0.106)S(0.893)PQK 110.66 7.9453e-05 11363000.0 2618.9 3092.6 3027.4 2294.9 3359.1 3280.0 3208.3 2787.3 4011.3 3744.8 3534.8 True False 3060.9062940423846 3250.000130437391 3456.7308426726313 2857.1506030219753 2864.980839772861 3627.0874229122105 3791.206581092139 3182.4083107482493 3102.74695472983 2898.8470791234467 2657.011604482987 1.152010886545597 1.2231787489952608 1.3009844732481917 1.0753248492408944 1.078271858105167 1.3651003318135622 1.4268686575156486 1.1977397108009606 1.1677581496049116 1.0910178466034652 1.0 11.375588813466607 -9.910231978969502 0.8282840079306825 1.0169616586971306 1.2267088089864087 0.2856680015742642 0.10620758778667068 0.446434301321163 0.6283106293300689 0.04558185636778451 0.02285226634950375 1.2296117966055485e-10 9.910231978969502 0.20974715028927804 YPSSISSS(ph)PQK ddPTM_A549_PD325901_60min_R1 2 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.003)S(0.04)S(0.957)PQK;YPSSISS(0.075)S(0.924)PQK 124.12 5.471000000000001e-06 24079700.0 11676.300000000001 11682.1 11592.400000000001 11324.4 13600.1 11483.0 12201.7 12567.1 10667.300000000001 13981.5 13458.9 True False 12861.66938036225 12666.591565333514 12379.129974764135 12023.882468421574 12644.87589379793 11389.486255176509 12666.04237052644 12316.439331800768 10218.990477535002 13098.705703902278 11803.540622996536 1.0896450303482828 1.0731179711158463 1.0487641268117631 1.0186674365313533 1.071278211993632 0.9649211722952573 1.0730714431438915 1.043452954091162 0.8657563695443726 1.1097268287773252 1.0 13.526932058886675 -8.705448652057253 12.758997667674153 0.9366147600319711 1.0466554054717214 0.0 0.0676468542776974 0.6490490844648611 146.9022088603078 0.009390521920546787 0.010646358406136008 1.970386158126705e-09 8.705448652057253 0.11004064543975034 YPSSISSS(ph)PQKDLTQAK ddPTM_A549_PD325901_60min_R1 3 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 Y(0.002)PS(0.065)S(0.057)IS(0.144)S(0.124)S(0.607)PQKDLT(0.001)QAK;YPSSIS(0.001)S(0.161)S(0.838)PQKDLTQAK;YPSSIS(0.01)S(0.188)S(0.801)PQKDLTQAK 185.23 7.8132e-40 264729000.0 16354.5 16313.4 16660.899999999998 14220.099999999999 19237.2 15889.8 16144.8 16638.8 16247.300000000001 17382.3 17742.3 True False 18014.796800453438 17688.187469882272 17791.608864130616 15098.443280809712 17886.045436737197 15760.39873704639 16759.199198773542 16306.926081113921 15564.482482507705 16284.778611518132 15560.109577706324 1.1577551372944093 1.1367649682380734 1.1434115405987542 0.9703301384485067 1.149480686329057 1.012871963294335 1.0770617722888796 1.0479955812443376 1.000281033033832 1.0465722320394244 1.0 13.925564599684407 -2.0000017997231465 0.20184855661723558 0.986111390777164 1.8736643541391813 0.4221249551962071 0.050130923806403195 24.07078488683443 0.26872609190243074 0.03400507836057155 6.8636299560490555 0.009999958559928978 2.0000017997231465 0.8875529633620173 YPT(ph)PYPDELK ddPTM_A549_MK2206_60min_R1 1 YPTPYPDELK 10 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 YPT(1)PYPDELK 130.1 1.3407e-06 7812100.0 3284.5 3921.3 3641.4 2792.5 4661.3 3960.2 3376.9 3685.5 5165.9 4426.7 4692.7 True False 3838.843301684759 4120.877420773503 4157.805275321435 3476.6626253600907 3975.62894478677 4379.265735431994 3990.4390186983883 4207.930911370384 3995.8318982471574 3426.705395523329 3527.3730780687206 1.0883009017539398 1.1682567535582977 1.1787256928314154 0.9856237342673164 1.1270792334117021 1.2415090886359246 1.1312778462558324 1.1929361647433894 1.1328067119100778 0.9714610050262933 1.0 11.784378457368362 -10.428532219966673 0.8290801257043984 1.0019063445102347 1.13943912668906 0.45481693718508887 0.06327510915507682 0.4793177372329875 0.6078450878906485 0.0385492273142439 0.012077704194204786 3.7279302669500514e-11 10.428532219966673 0.13753278217882525 YPT(ph)PYPDELK ddPTM_A549_PD325901_60min_R1 1 YPTPYPDELK 10 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 Y(0.006)PT(0.994)PYPDELK 112.94 0.00012807 14033000.0 3811.4 4519.7 3480.6 4279.5 3937.1 4172.2 4237.2 4550.9 3991.8 4330.5 4717.1 True False 4198.330522195615 4900.590980888529 3716.8144465480887 4543.834995550325 3660.571678257649 4138.222986488501 4398.448964684805 4460.128729388013 3824.038527858428 4057.0714909522476 4136.926604160595 1.0148428831135812 1.1845970329664297 0.8984482448419581 1.0983600702464709 0.8848529424177201 1.0003133684621337 1.0632165821509116 1.0781261443948187 0.924367022613481 0.9806969954148967 1.0 12.014343646694204 -5.762246614240858 24.999997632729922 0.9805571280669906 1.0997199422731032 0.21623603400621305 0.07655357725733143 19.189990328762907 594415.9580165161 0.010065115985621815 0.03422485383580633 1.7288343613605683e-06 5.762246614240858 0.11916281420611263 YQAVTATLEEK ddPTM_A549_PD325901_60min_R1 2 YQAVTATLEEK 11 0 P40429;Q8J015;M0QYS1;Q6NVV1 P40429 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 0 ; 172.17 1.0568000000000001e-14 11209700.0 10710.3 10537.099999999999 11589.599999999999 12235.400000000001 13649.9 13054.3 11270.4 12726.599999999999 13904.3 12105.9 12933.3 False True 11797.601771493859 11425.09839695566 12376.13994992636 12991.152869390455 12691.178113598608 12947.990108939373 11699.301239399525 12472.75797917544 13319.95062450572 11341.53140799418 11342.586090943623 1.0401156911573752 1.007274558495784 1.0911215353091275 1.1453431135747 1.1188963444352213 1.1415377414924424 1.031449190298914 1.0996397011378376 1.1743310139070404 0.9999070156540152 1.0 13.46946198942599 -5.771180353656671 23.75229480607917 1.0926464630447668 1.0236951284620186 0.16844180161683564 0.05563541832218616 142.99899224684407 348694.90260597196 0.00921619295708625 0.029233446835017562 1.6936343225334247e-06 5.771180353656671 -0.06895133458274816 YQDEVFGGFVTEPQEES(ph)EEEVEEPEER ddPTM_A549_MK2206_60min_R1 4 YQDEVFGGFVTEPQEESEEEVEEPEER 27 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 YQDEVFGGFVT(0.199)EPQEES(0.801)EEEVEEPEER;YQDEVFGGFVT(0.212)EPQEES(0.788)EEEVEEPEER;YQDEVFGGFVT(0.001)EPQEES(0.999)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER 117.82 6.332e-18 70120800.0 3378.87 3245.6099999999997 2796.51 2792.91 4127.52 4128.55 3627.43 2888.3199999999997 4822.38 4409.1900000000005 4515.7 True False 3949.140650559773 3410.797685878837 3193.09716880572 3477.173075378494 3520.3672756926812 4565.430420690307 4286.487076785545 3297.748205109023 3730.118629758442 3413.1509166845535 3394.327063020206 1.1634531903492837 1.004852397118142 0.9407158206977746 1.0244071978981817 1.0371326069445785 1.345017830022566 1.2628385530331045 0.9715469793811651 1.0989272867651874 1.005545680576697 1.0 11.728909868241466 -5.233820614570733 21.836150297470834 1.0644044493388674 1.1634538854875958 0.04782941258956852 0.11936782334646431 4162.9318288152745 3291031.4731527967 0.016872380862342974 1.5398319443832635 5.836861461774771e-06 5.233820614570733 0.09904943614872841 YQDEVFGGFVTEPQEES(ph)EEEVEEPEER ddPTM_A549_PD325901_60min_R1 2 YQDEVFGGFVTEPQEESEEEVEEPEER 27 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER 155.92 2.5921e-41 495130000.0 2639.3199999999997 2843.3 3045.0 3153.3 3410.6 2708.3 2291.7 2894.6 3049.8 2922.06 3445.3 True False 2907.261823435308 3082.9148695622193 3251.652011072493 3348.0721793361013 3171.051221931253 2686.2445027340036 2378.9118975663573 2836.8649322302276 2921.6275119651873 2737.560632918121 3021.549941556145 0.9621756646981063 1.0203090894385385 1.0761536542394008 1.108064484815959 1.0494783416679563 0.8890286623396157 0.787315101050814 0.9388773930935586 0.9669300751191635 0.9060120421204209 1.0 11.561073072418665 -7.2259964402170676 23.57403097291462 0.9578457767584341 1.0473928728995838 0.39753359484590234 0.06824463238446 345.7632150545647 229975.81897031888 0.011231499303980715 0.019452856283192488 5.942970298719242e-08 7.2259964402170676 0.08954709614114975 YQEADS(ph)EEEEVVPR ddPTM_A549_MK2206_60min_R1 2 YQEADSEEEEVVPR 14 0 A0A669KB44;A0A669KAW0;A0A669KBE2;O60312 A0A669KB44 ATP10A Probable phospholipid-transporting ATPase VA 1 YQEADS(1)EEEEVVPR;YQEADS(1)EEEEVVPR 191.37 1.4066999999999998e-26 8111100.0 2286.4 2427.7 2004.37 1682.1100000000001 3118.1000000000004 2048.08 2353.1000000000004 2315.31 2850.2 3165.4 3108.4 True False 2672.2884228869034 2551.259560454908 2288.6198054858096 2094.2270255127864 2659.431620522095 2264.8064661945245 2780.6278109802447 2643.5122828394965 2204.6342508341345 2450.333941534222 2336.498492524306 1.1437150211895992 1.0919157742312848 0.9795083595424153 0.8963100263977597 1.1382124272842558 0.9693164679715556 1.1900832891084427 1.131399096253428 0.9435633097508622 1.0487205317590127 1.0 11.190132391058718 -8.777524565178567 24.996061782610987 0.9733493374940647 1.0628909318664623 0.09432640118979352 0.08772679737401481 299.1013797446408 464795.7531980121 0.01498057638652217 0.01597212508553574 1.6690733960515195e-09 8.777524565178567 0.08954159437239761 YQEADS(ph)EEEEVVPR ddPTM_A549_PD325901_60min_R1 2 YQEADSEEEEVVPR 14 0 A0A669KB44;A0A669KAW0;A0A669KBE2;O60312 A0A669KB44 ATP10A Probable phospholipid-transporting ATPase VA 1 YQEADS(1)EEEEVVPR;YQEADS(1)EEEEVVPR 191.44 1.3741e-26 11104200.0 1796.08 2148.83 2043.9 2079.2 2158.74 1809.9299999999998 1883.46 1910.6999999999998 2184.92 2042.88 1914.71 True False 1978.4167193957871 2329.919445419541 2182.611344969152 2207.6274617941904 2007.1175496487058 1795.1905301603792 1955.136100968858 1872.5895895848478 2093.095410663971 1913.8922081599187 1679.2128083467235 1.1781810557672237 1.3875069519708305 1.2997824540881462 1.314679980298459 1.1952728919599074 1.0690667205711957 1.1643170485900451 1.1151591866599173 1.2464741813902298 1.1397556037249679 1.0 10.71356936073294 -14.999999999999993 0.1324862153415687 0.2602530893459603 1.3230924321146582 0.350658994348947 0.08741135535780872 45.772926819900185 0.4130682044093415 9.109541696200763 0.24800868339990695 1.0000000000000164e-15 14.999999999999993 1.062839342768698 YQEDS(ph)DPERS(ph)DYEEQQLQKEEEAR ddPTM_A549_MK2206_60min_R1 3 YQEDSDPERSDYEEQQLQKEEEAR 24 2 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 2 YQEDS(1)DPERS(1)DYEEQQLQKEEEAR;Y(0.095)QEDS(0.904)DPERS(0.983)DY(0.018)EEQQLQKEEEAR;YQEDS(1)DPERS(0.977)DY(0.023)EEQQLQKEEEAR 92.609 6.731900000000001e-08 65461000.0 2226.11 2286.67 2056.0699999999997 1489.6899999999998 2712.0 2270.94 2387.0 2687.5299999999997 3540.86 3059.2400000000002 3568.75 True False 2601.8229448358843 2403.051735842743 2347.6516428928835 1854.664116874725 2313.0683925646763 2511.2493634720304 2820.687002171536 3068.495607715438 2738.8608635915216 2368.1555592655463 2682.5308825106517 0.9699135103342293 0.8958151242582016 0.8751629508532085 0.6913859329510853 0.8622709276695499 0.936149283441496 1.0515021543877177 1.143880813347264 1.0209988192300508 0.8828064477114712 1.0 11.389379064698312 -7.503206412909266 3.220038898114567 1.02489283329349 0.8535815220346861 0.45068312978691893 0.08430969408648357 0.15255782076166993 3.251617141843729 0.011787474386794705 0.01877771021489524 3.1390164172337474e-08 7.503206412909266 -0.17131131125880383 YQEDS(ph)DPERS(ph)DYEEQQLQKEEEAR ddPTM_A549_PD325901_60min_R1 3 YQEDSDPERSDYEEQQLQKEEEAR 24 2 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 2 Y(0.002)QEDS(0.998)DPERS(1)DYEEQQLQKEEEAR;Y(0.002)QEDS(0.998)DPERS(0.999)DY(0.001)EEQQLQKEEEAR;YQEDS(1)DPERS(1)DYEEQQLQKEEEAR 146.78 2.4649e-28 140290000.0 4830.66 5429.54 4710.48 4891.08 5105.46 4224.08 4763.11 5337.26 4389.17 5147.32 5188.07 True False 5321.065047056064 5887.106390772289 5030.161499217325 5193.190903151368 4746.870102480833 4189.680492969261 4944.372757523801 5230.804162300527 4204.708448649828 4822.317336752872 4549.970279885407 1.1694724843763327 1.2938779879064526 1.1055372210791699 1.141368093349867 1.0432749689521896 0.9208149142184682 1.086682429417611 1.1496347977095507 0.9241177831947784 1.0598568869936276 1.0 12.151641406412548 -6.297547067695769 0.5677846225356776 0.9758235763151307 1.2822282812538603 0.40860004709204933 0.08060108635508756 0.8462633234955783 0.34756387723396825 0.015534236898070559 0.13725626971971144 5.040259911288365e-07 6.297547067695769 0.3064047049387296 YQEDS(ph)DPERSDYEEQQLQKEEEAR ddPTM_A549_MK2206_60min_R1 4 YQEDSDPERSDYEEQQLQKEEEAR 24 2 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 YQEDS(1)DPERSDYEEQQLQKEEEAR;YQEDS(1)DPERSDYEEQQLQKEEEAR;YQEDS(0.922)DPERS(0.078)DYEEQQLQKEEEAR;YQEDS(0.997)DPERS(0.003)DYEEQQLQKEEEAR 197.01 7.062899999999999e-62 162273000.0 6647.360000000001 7519.4000000000015 6965.500000000001 5865.27 8332.199999999999 7021.4 6240.95 8211.9 10685.7 9565.3 10020.8 True False 7769.271855651455 7902.105342045822 7953.312639438536 7302.261413301973 7106.544417598595 7764.399887571887 7374.849830834702 9375.961972889014 8265.40601155649 7404.492086610635 7532.358799989559 1.031452704518301 1.0490877495183548 1.0558860578242184 0.9694521473554998 0.9434686538841519 1.0308058994192695 0.9790890246551882 1.244757747453827 1.0973197415354068 0.9830243464531853 1.0 12.878886008278153 YQEDS(ph)DPERSDYEEQQLQKEEEAR ddPTM_A549_PD325901_60min_R1 2 YQEDSDPERSDYEEQQLQKEEEAR 24 2 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 YQEDS(1)DPERSDYEEQQLQKEEEAR;YQEDS(1)DPERSDYEEQQLQKEEEAR 288.16 4.805899999999998e-142 240180000.0 16297.800000000001 17272.1 16149.2 16205.1 22128.0 17788.1 16241.3 17163.4 20347.6 18668.800000000003 20296.8 True False 17952.34065819376 18727.68048344023 17245.181825028547 17206.05222254763 20573.80561745581 17643.23961122575 16859.371559080377 16821.06252257318 19492.461132685035 17490.04878196266 17800.422272016003 1.008534538330396 1.052091922160856 0.9688074564466739 0.9666092163216387 1.155804356944938 0.9911697229207106 0.947133236585345 0.9449810945787239 1.0950561079289158 0.9825637007195454 1.0 14.119623845601646 -8.771692960101934 24.989816100225326 1.044887597097495 1.0062336806298622 0.0 0.06276811504803965 454.7015548761058 1108186.0879069373 0.011356754557655224 0.012153386991264682 1.69163647142227e-09 8.771692960101934 -0.03865391646763272 YQEQGGEAS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 YQEQGGEASPQR 12 0 H0Y5J4;Q9UJU6-5;Q9UJU6 H0Y5J4 DBNL Drebrin-like protein 1 YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR 109.84 9.1819e-05 81975000.0 1369.2199999999998 1137.1 1064.71 1300.8400000000001 1308.62 924.6500000000001 1058.78 1388.23 1574.85 1822.33 1832.52 True False 1600.310861784992 1194.9735330532094 1215.7018879242835 1619.545858396927 1116.1237315184317 1022.4958492670053 1251.146620929693 1585.0158537760715 1218.1489895186783 1410.664387336848 1377.4547090209242 1.1617883704666203 0.8675229212455051 0.8825712235492575 1.1757525294955635 0.8102798039085851 0.7423081445587284 0.9083032732299349 1.1506845512929271 0.8843477622465873 1.0241094520919158 1.0 10.427789168144464 -5.24878366424608 23.57038729820281 0.9406316668005069 1.161788683537935 0.19258438443121684 0.12761800938189105 1092.1100785726537 2033896.8336723188 0.01670003527427183 0.38174403208608493 5.639184914275149e-06 5.24878366424608 0.22115701673742805 YQEQGGEAS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 YQEQGGEASPQR 12 0 H0Y5J4;Q9UJU6-5;Q9UJU6 H0Y5J4 DBNL Drebrin-like protein 1 YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR 149.32 4.1951e-12 116740000.0 3125.8 3388.8 3235.3999999999996 2923.8 3666.8 3261.5 3387.8999999999996 3311.9 2711.2 3245.3999999999996 3664.8999999999996 True False 3443.1289149076592 3674.3860689946364 3454.9737000407035 3104.3964855684158 3409.2566177732706 3234.9394253468768 3516.8283884300126 3245.841556364711 2597.2576924519703 3040.4848901365694 3214.1405337152373 1.0712440476047678 1.143193967547959 1.0749292583193575 0.9658558650452138 1.0607055236108478 1.0064710585655687 1.094173808375733 1.0098629858641652 0.8080722249720022 0.9459713594483254 1.0 11.65021729483924 -8.546318862181494 13.902800556629076 0.9093385503254314 1.057319751748193 0.5110961767713604 0.0603140445621768 1.18060794826727 699.2292495350733 0.013378920645683808 0.015183359999933348 2.8423734498022164e-09 8.546318862181494 0.1479812014227615 YQEQGGEAS(ph)PQRTWEQQQEVVSR ddPTM_A549_MK2206_60min_R1 2 YQEQGGEASPQRTWEQQQEVVSR 23 1 H0Y5J4;Q9UJU6-5;Q9UJU6 H0Y5J4 DBNL Drebrin-like protein 1 YQEQGGEAS(0.983)PQRT(0.017)WEQQQEVVSR;YQEQGGEAS(0.848)PQRT(0.152)WEQQQEVVSR 162.91 9.1171e-34 34947000.0 2428.0 3269.8 2148.94 2426.8 3589.8 2684.1000000000004 2672.3 2803.2 4616.1 4392.4 4556.2 True False 2837.7870410992814 3436.218853554993 2453.6920053686067 3021.3661089431916 3061.745175379304 2968.1296804386193 3157.822319188518 3200.5621844399593 3570.56072039697 3400.1537893457116 3424.7697952770677 0.8286066540918267 1.00334301543237 0.7164545800282324 0.8822099847732275 0.894000285683904 0.8666654572029401 0.92205389207278 0.9345335236411212 1.0425695546956046 0.9928123618804093 1.0 11.741791301531192 -8.341372315343055 1.5850205808935225 1.0200903678049351 0.8671477035576034 0.46176222035969605 0.06580395895988841 0.20755694690238993 1.0127093957823075 0.011140961515073806 0.01400780530283565 4.556461286182178e-09 8.341372315343055 -0.15294266424733172 YQEQGGEAS(ph)PQRTWEQQQEVVSR ddPTM_A549_PD325901_60min_R1 2 YQEQGGEASPQRTWEQQQEVVSR 23 1 H0Y5J4;Q9UJU6-5;Q9UJU6 H0Y5J4 DBNL Drebrin-like protein 1 YQEQGGEAS(0.951)PQRT(0.049)WEQQQEVVSR;YQEQGGEAS(0.995)PQRT(0.005)WEQQQEVVSR 205.07 9.701699999999997e-62 66418000.0 5691.2 6239.2 5246.799999999999 5605.4 5599.5 6204.0 4999.200000000001 5174.6 6561.5 7144.4 7579.0 True False 6268.966434359997 6764.999280474304 5602.879399571481 5951.632827212942 5206.210437226312 6153.476680929642 5189.4472916672075 5071.388543604831 6285.742973230896 6693.30136472907 6646.83104723943 0.9431511632845899 1.0177781310213914 0.8429399453290567 0.8954090731228653 0.7832620387407864 0.9257760032106295 0.7807400631647611 0.7629784039284535 0.9456751538526766 1.0069913492850011 1.0 12.698450967817863 -8.968710029150609 12.565409975154779 0.9760626427851165 0.8690735592988603 0.33047628529965867 0.07394386995009701 0.8485810943637937 339.33200920636506 0.013416789092082214 0.014062717596320592 1.0747067357818717e-09 8.968710029150609 -0.10698908348625613 YQEQGGEAS(ph)PQSR ddPTM_A549_MK2206_60min_R1 2 YQEQGGEASPQSR 13 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3 B4DDD6 DBNL Drebrin-like protein 1 YQEQGGEAS(0.963)PQS(0.037)R;YQEQGGEAS(0.996)PQS(0.004)R 123.29 6.0680999999999996e-06 41472000.0 1096.14 869.1500000000001 968.5999999999999 967.71 1436.48 664.05 1057.44 960.9599999999999 1346.71 1557.5 1698.43 True False 1281.1416339499865 913.3860225601945 1105.962044729044 1204.798993442152 1225.17569489355 734.3193302392847 1249.5631602749352 1097.1790228165748 1041.6823352539598 1205.6596682692714 1276.662956716656 1.003508112465994 0.715448049741536 0.8662913252949521 0.9437095257629117 0.9596704349004361 0.5751865254458545 0.9787729437130246 0.8594116536742938 0.8159415370936872 0.9443836855500279 1.0 10.31816198366224 -10.84083161835049 0.9758238609577286 1.0041173213619194 0.8520013029860543 0.11288974440298816 0.12002690979197031 0.8030126251754545 1.2957685039320788 0.08859463053783506 0.019468656000631624 1.4426745869083213e-11 10.84083161835049 -0.1521160183758652 YQEQGGEAS(ph)PQSR ddPTM_A549_PD325901_60min_R1 2 YQEQGGEASPQSR 13 0 B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3 B4DDD6 DBNL Drebrin-like protein 1 YQEQGGEAS(0.97)PQS(0.03)R;YQEQGGEAS(0.998)PQS(0.002)R 143.93 2.1443e-12 50751000.0 1320.0 1688.56 1966.82 1801.99 2067.06 1979.75 1907.96 2101.28 1538.12 1848.0300000000002 2265.0 True False 1454.0054282673598 1830.8608772018358 2100.3002326494598 1913.294829683778 1921.8768365698756 1963.627572384021 1980.568461875773 2059.3683219777286 1473.4781653563819 1731.3450704132272 1986.4193590179868 0.7319730457047936 0.9216890023197049 1.0573297240154624 0.9631877684829054 0.9675081084187487 0.9885261958757625 0.9970545508854151 1.0367238481786671 0.7417759793102378 0.8715909168692058 1.0 10.955954511409873 -8.728708554285177 24.998550370576123 0.878060692070308 0.9629090327097728 0.13346877359601184 0.09757163743789282 347.07716675644497 265084.0588441211 0.020127691262326303 0.02282190350929432 1.867632598579705e-09 8.728708554285177 0.08484834063946478 YQES(ph)PGIQMK ddPTM_A549_MK2206_60min_R1 1 YQESPGIQMK 10 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 YQES(1)PGIQMK 58.172 0.0041611 12324000.0 4261.5 4133.6 3295.9 4045.0 5065.9 3841.0 3380.4 3934.0 5093.6 5724.5 6243.7 True False 4980.737016328085 4343.982583966885 3763.308180076874 5036.025181586947 4320.712820757153 4247.452070550553 3994.5749233936567 4491.656547369718 3939.907732807782 4431.331474162086 4693.216972646375 1.0612628918197202 0.9255874188824117 0.8018611119005752 1.0730433327371336 0.9206292498172789 0.9050193279590762 0.8511379181221247 0.9570528218807232 0.83948979042965 0.9441991495363107 1.0 12.196361443968188 -6.956542974791113 24.999578820896602 0.9176854523675411 0.956649010677255 0.07638146469004714 0.07928535100664126 409.87144702208946 235785.49372243384 0.012521344167503657 0.023663108855068858 1.1052410969239701e-07 6.956542974791113 0.038963558309713986 YQES(ph)PGIQMK ddPTM_A549_PD325901_60min_R1 2 YQESPGIQMK 10 0 Q9UHI6;E9PJ60 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 1 Y(0.002)QES(0.998)PGIQMK;YQES(1)PGIQMK 67.87899999999999 0.0015499 32810000.0 10529.7 13791.400000000001 8945.2 19104.9 14101.8 12379.3 9339.9 9563.1 12183.5 11907.900000000001 15043.0 True False 11598.66739244456 14953.649678922511 9552.27506385737 20284.966282624002 13111.338216568965 12278.487085143832 9695.335005489382 9372.356468393182 11671.469864262532 11156.03316178508 13192.806365433804 0.8791660448253061 1.1334699581510008 0.7240517899879958 1.5375778072338133 0.9938248052303496 0.9306956188877629 0.7348955739160946 0.710414161231798 0.8846843909452583 0.8456148640985719 1.0 13.687463865961663 -7.148162731940311 4.708515576272071 0.9064605462340661 1.0710124035675466 0.1709621337751377 0.20508859101297675 0.37935616345414713 13.263325977299639 0.029554343184063248 0.052044982124797405 7.109470689274885e-08 7.148162731940311 0.16455185733348043 YQGVNLYVK ddPTM_A549_MK2206_60min_R1 2 YQGVNLYVK 9 0 P11940-2;E7EQV3;A0A087WTT1;P11940;E7ERJ7;H0YAR2;H0YAP2;Q4VXU2-2;Q4VXU2;A0A6I8PS38;A0A6I8PLA1 P11940-2 PABPC1;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 1-like 0 ; 111.04 0.00093299 2613700.0 4016.7 4659.6 5501.799999999999 4834.5 6049.5 4471.9 4525.3 4627.799999999999 7208.8 5936.9 6085.5 False True 4694.620761113463 4896.753737239235 6282.03796994658 6018.95271702895 5159.626563724191 4945.113489793021 5347.4884335680135 5283.804822043108 5576.018310088098 4595.750166643879 4574.302398744261 1.0263031063276953 1.0704919155724146 1.3733324608515447 1.3158187177746 1.127959219561132 1.0810639653273808 1.1690281855952522 1.1551061476595033 1.2189876890558937 1.0046887516456073 1.0 12.159336027488175 -10.845922777341164 0.9544469471956553 0.9937576749301625 1.1767365716249074 0.30232136167472956 0.09817110532857713 0.647077938364991 0.9862655347846447 0.08525112817087682 0.018176900613527253 1.4258611059114164e-11 10.845922777341164 0.18297889669474487 YQGVNLYVK ddPTM_A549_PD325901_60min_R1 1 YQGVNLYVK 9 0 P11940-2;E7EQV3;A0A087WTT1;P11940;E7ERJ7;H0YAR2;H0YAP2;Q4VXU2-2;Q4VXU2;A0A6I8PS38;A0A6I8PLA1 P11940-2 PABPC1;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 1-like 0 127.56 0.00014376 2575000.0 3407.3 2620.0 3451.9 4118.8 4825.8 3980.3 4140.3 4311.4 5026.2 3936.8 3956.2 False True 3753.2065876783154 2840.796594890798 3686.1666919609665 4373.208921526504 4486.85245610621 3947.8857564642603 4297.861382159091 4225.4057447721325 4814.966293081323 3688.2297761415075 3469.612480418082 1.081736536532766 0.8187648075754232 1.0624145240326062 1.260431516836007 1.2931854728530239 1.1378463095649654 1.238715103319321 1.2178321840319697 1.3877533356408518 1.0630091391927097 1.0 11.760558822451442 -6.025389157384064 5.310468309542715 1.201205424073122 0.9463587748628702 0.4198134404559436 0.11557442079697945 0.15156610994899117 12.503814588626055 0.020453417534226605 0.059144406797474784 9.432153124506971e-07 6.025389157384064 -0.2548466492102518 YQILPLHS(ph)QIPR ddPTM_A549_PD325901_60min_R1 1 YQILPLHSQIPR 12 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 Y(0.001)QILPLHS(0.999)QIPR 41.967 0.04145 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YQKLPS(ph)DEDESGTEESDNTPLLK ddPTM_A549_MK2206_60min_R1 1 YQKLPSDEDESGTEESDNTPLLK 23 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 YQKLPS(0.981)DEDES(0.017)GT(0.002)EESDNTPLLK 98.243 5.7287999999999997e-08 3055100.0 916.72 825.66 921.72 671.53 1036.8 909.83 866.14 870.63 1151.8 1455.6 1289.2 True False 1071.4399243478315 867.6825673210029 1052.4337557997674 836.0548801461272 884.2880934406551 1006.107606703725 1023.5064265022427 994.0444686925516 890.9191390466482 1126.778949041895 969.0560598900831 1.105653190455629 0.8953894446719846 1.086040116109631 0.8627518208192807 0.9125252191714863 1.038234678412562 1.0561890780790697 1.0257863397555171 0.9193680076132048 1.1627593032849945 1.0 9.920436317732928 -9.211875698296254 0.002241620632061655 1.0569281434476867e-05 1.9502906184117264 0.0 0.09803824071949095 203917.63150816836 267.5340848611094 116735.38335836094 116021.5516828288 6.139376983524274e-10 9.211875698296254 1.9502800491302918 YQKLPS(ph)DEDESGTEESDNTPLLK ddPTM_A549_PD325901_60min_R1 1 YQKLPSDEDESGTEESDNTPLLK 23 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 YQKLPS(0.727)DEDES(0.273)GT(0.001)EESDNTPLLK 163.19 8.547699999999999e-34 5183300.0 1832.5 1868.2 1883.2 1963.5 1872.8 1869.0 2008.9 2103.7 1914.2 1983.6 1896.4 True False 2018.5340509848006 2025.6397704484693 2011.0052766015494 2084.7809355679556 1741.2609888092568 1853.7794836649755 2085.3497888122597 2061.740053179277 1833.7528308098115 1858.355157476707 1663.1548222700706 1.2136777790955544 1.2179502132481186 1.2091509760087706 1.2535098402459008 1.0469626552461169 1.114616305615323 1.2538518728917416 1.239656119545846 1.1025749414638912 1.1173675069770137 1.0 10.699706759315308 -9.433297005558007 0.9207973383295373 1.0185831771186524 1.1913613698101932 0.32296843645398676 0.06933069991249004 0.2702760563869693 0.4857579159646941 0.019568095422552778 0.01422831569870888 3.6872534822396076e-10 9.433297005558007 0.17277819269154082 YQKLPSDEDES(ph)GTEESDNTPLLK ddPTM_A549_MK2206_60min_R1 3 YQKLPSDEDESGTEESDNTPLLK 23 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 YQKLPS(0.263)DEDES(0.717)GT(0.02)EESDNTPLLK;YQKLPS(0.003)DEDES(0.876)GT(0.114)EES(0.005)DNT(0.002)PLLK;YQKLPSDEDES(0.914)GT(0.085)EESDNTPLLK 122.78 3.8531e-16 12722700.0 3198.03 4596.7 4876.24 4753.7 6293.5 5507.0 4486.7 3615.1000000000004 7982.8 8126.3 7507.000000000001 True False 3737.7792796732865 4830.652395906856 5567.764155471357 5918.356713401702 5367.734486949035 6089.747084749256 5301.875313214507 4127.551495779426 6174.708545912118 6290.5631860395415 5642.804717340095 0.6623974188203346 0.8560729349825753 0.9867015490296623 1.048832452984745 0.9512529240032389 1.079205712371319 0.9395815695911066 0.7314716178455792 1.0942623137280485 1.1147937065248623 1.0 12.462196707219722 -5.395062755950863 1.7786611951049136 1.0122260043508573 0.5981742503669599 0.488382612806191 0.1006157970056802 0.4064140161008605 1.5653267304025456 0.014344165624143996 0.2571313281079034 4.026588455489931e-06 5.395062755950863 -0.4140517539838974 YQKLPSDEDES(ph)GTEESDNTPLLK ddPTM_A549_PD325901_60min_R1 2 YQKLPSDEDESGTEESDNTPLLK 23 1 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 YQKLPS(0.001)DEDES(0.9)GT(0.097)EES(0.002)DNTPLLK;YQKLPSDEDES(0.972)GT(0.027)EESDNTPLLK 137.35 4.9342e-23 17608300.0 4267.5 4391.2 5172.2 4368.8 5959.200000000001 5807.6 6231.9 6045.1 6111.5 5789.0 5837.5 True False 4700.733458432545 4761.261834917738 5523.216594965242 4638.650853735312 5540.646350123944 5760.304831103641 6469.058364726528 5924.525738210794 5854.654908313742 5423.481552043081 5119.524506961366 0.9181972763370189 0.9300203228724712 1.0788534340357094 0.9060706414097291 1.0822579992712118 1.1251640310093178 1.2636053125500444 1.157241405945965 1.1435934920035582 1.0593721242409142 1.0 12.321794105960661 -6.849888565311132 7.070462942342352 1.0968915244881419 0.9652121239538335 0.4880612125452968 0.07696845731126027 0.2095672187401385 14.175425772877404 0.013405159695071152 0.0254980746478881 1.4129000311020428e-07 6.849888565311132 -0.13167940053430838 YQKLPSDEDES(ph)GTEESDNTPLLKDDKDR ddPTM_A549_PD325901_60min_R1 2 YQKLPSDEDESGTEESDNTPLLKDDKDR 28 3 Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5 Q9ULH0-2 KIDINS220 Kinase D-interacting substrate of 220 kDa 1 YQKLPS(0.001)DEDES(0.968)GT(0.031)EESDNTPLLKDDKDR;YQKLPSDEDES(0.719)GT(0.126)EES(0.126)DNT(0.028)PLLKDDKDR 134.78 4.6003e-28 19605100.0 2767.21 3266.01 3002.78 4164.9 3342.6 4397.700000000001 4102.9 4529.9 3946.6000000000004 4218.6 3981.0 True False 3048.135122087665 3541.2481247630935 3206.5667079830077 4422.156413825811 3107.827307343987 4361.88658925279 4259.038104693029 4439.547590862194 3780.7381266711936 3952.2368760492213 3491.362237638233 0.873050378224176 1.0142883733423795 0.9184285358348041 1.2665991417771714 0.8901474827906449 1.2493365890912058 1.2198786074899228 1.27158034276769 1.0828833759824108 1.132004245633003 1.0 11.769574332567624 YQKS(ph)TELLIR ddPTM_A549_MK2206_60min_R1 2 YQKSTELLIR 10 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 1 Y(0.002)QKS(0.935)T(0.063)ELLIR;YQKS(0.967)T(0.033)ELLIR 106.32 8.248299999999999e-05 10720400.0 2609.5 2948.9 2229.6 2378.7 2784.8 2607.7 2191.3 2251.5 3680.2 3593.1000000000004 3803.1000000000004 True False 3049.919803850322 3098.986414229716 2545.790806243936 2961.481606783899 2375.159609002252 2883.645083148834 2589.430845353368 2570.657019929569 2846.640576071776 2781.416214483673 2858.685309779689 1.0668959585780258 1.0840600060552124 0.8905460134190613 1.0359592910253324 0.8308573178295373 1.0087312070635257 0.9058117857515868 0.899244492261963 0.9957866178320828 0.9729704087988716 1.0 11.481136098402311 -5.731000585795804 24.958573336937153 0.9719702182573807 1.0754781623477399 0.3317817549029338 0.06263596102974577 189.6649170689692 155514.80751619514 0.008430416338665514 0.03264269312052907 1.857801949203723e-06 5.731000585795804 0.10350794409035913 YQKS(ph)TELLIR ddPTM_A549_PD325901_60min_R1 2 YQKSTELLIR 10 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 1 Y(0.001)QKS(0.938)T(0.061)ELLIR;YQKS(0.843)T(0.157)ELLIR 95.428 0.00015545 19502900.0 4417.6 3370.7000000000003 3615.8 4059.0 4823.9 4187.9 4415.2 4424.3 4465.1 4525.4 5296.9 True False 4866.071499934762 3654.7607184726803 3861.189931571731 4309.715211342163 4485.085905551564 4153.795130893822 4583.222852090147 4336.053865703796 4277.447374803517 4239.665471690403 4645.414879815614 1.0474998737094299 0.7867458156111442 0.8311830119519894 0.9277352664598224 0.9654866188678473 0.8941709703781494 0.9866121693466623 0.9334050839127426 0.9207890975226087 0.9126559373871649 1.0 12.18159173343877 -14.99999999957547 0.13036954122863806 1.2875057199059725 0.8790214396858409 0.0 0.07127723256158164 88.40416491735691 0.7881003324446595 6.636113747494476 0.19008592283890927 1.0000000009775159e-15 14.99999999957547 -0.4084842802201316 YQLDKDGVVLFK ddPTM_A549_MK2206_60min_R1 2 YQLDKDGVVLFK 12 1 H7BZ94;P07237;I3L398;I3L312;I3L3U6 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 136.27 3.1078999999999997e-08 5455900.0 4187.5 4710.3 4088.3 3762.0 6088.6 4793.7 4507.8 4043.9 6397.799999999999 6091.5 6276.299999999999 False True 4894.2476254543835 4950.034150682024 4668.082415306377 4683.690168882599 5192.975005519646 5300.966152199471 5326.808910091686 4617.135208924354 4948.708515187223 4715.425919269513 4717.721492932147 1.03741766714858 1.0492425545038884 0.9894781670134328 0.992786491508553 1.1007379331949756 1.1236284634735458 1.1291062683696023 0.9786790542514037 1.0489615638822956 0.9995134147562391 1.0 12.203874537358706 -4.428903355061069 16.288791318953294 1.0360028955515892 1.0504587781489834 0.0 0.05293928077381547 0.0 0.0 0.007184365501109224 0.0 3.724745849923055e-05 4.428903355061069 0.014455882597394165 YQPLAST(ph)ASDNDFVTPEPR ddPTM_A549_MK2206_60min_R1 1 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLAS(0.063)T(0.705)AS(0.232)DNDFVTPEPR 197.45 1.879e-54 31220000.0 1874.4 1798.2 1557.3 1247.1 2497.8 1787.8 1387.9 1744.4 3098.2 2535.9 2529.9 True False 2190.75289531981 1889.7206992668018 1778.148556944601 1552.6395559844464 2130.3769288156523 1976.9838093544058 1640.06346473141 1991.6740420009505 2396.462646808754 1963.0384287409595 1901.65600831207 1.1520237549504788 0.9937237286906258 0.9350526852240245 0.8164670945733165 1.1202746025063688 1.0396116861898685 0.8624396092472831 1.0473366546291312 1.2601977625469074 1.0322784037494632 1.0 10.893040584496038 -8.5265288988938 24.95262231361599 1.1244972772953181 0.9847744793432283 0.14467609327886732 0.11184558320070258 128.07230334534069 875503.4955527884 0.021556649955683432 0.024498499587396555 2.9748912965957413e-09 8.5265288988938 -0.13972279795208986 YQPLASTAS(ph)DNDFVTPEPR ddPTM_A549_MK2206_60min_R1 1 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLASTAS(1)DNDFVTPEPR 223.5 1.1426999999999998e-74 29521000.0 1583.9 1713.4 1827.2 1566.0 2484.1 1656.7 1631.6 2066.5 2322.2 2402.2 2385.5 True False 1851.2235973629126 1800.6047414768884 2086.324435400485 1949.670070300412 2118.692180667371 1832.0108943715431 1928.0406002275136 2359.4327033908294 1796.2254077913917 1859.541351599644 1793.1145135493264 1.0324067890670094 1.0041772167203844 1.1635199088711703 1.0873092909393702 1.1815710400300032 1.0216920785194161 1.0752467762982476 1.315829349192273 1.0017349110826768 1.0370455079964922 1.0 10.80825191054505 -8.92373869415274 24.999999963431964 1.0007459144487552 1.1092606228179984 0.20483903067889342 0.084432826771068 34.94365552492134 11454.050173125073 0.01404277204081852 0.01494963504145009 1.1919589689348193e-09 8.92373869415274 0.10851470836924326 YQPLASTAS(ph)DNDFVTPEPR ddPTM_A549_PD325901_60min_R1 2 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLAS(0.005)T(0.068)AS(0.926)DNDFVTPEPR;YQPLAST(0.071)AS(0.929)DNDFVTPEPR 384.74 0.0 103222000.0 10577.5 11499.2 12121.599999999999 12086.2 13942.5 12914.3 12621.0 14593.0 14634.8 18175.7 17365.199999999997 True False 11651.32001325605 12468.277940445914 12944.244669102252 12832.737124248244 12963.226899013802 12809.130222522512 13101.299061476202 14301.931167012957 14019.750249887898 17028.083200115634 15229.390487072453 0.7650549129425983 0.8186984207299483 0.8499515906490179 0.8426297254076832 0.8511980115039866 0.8410796369950333 0.8602641762056931 0.9391006934357108 0.9205719862386244 1.118106677648722 1.0 13.8945705827749 -6.580340728638216 0.08794432589592778 1.158977459244049 0.5234635986749187 0.8092976565535437 0.04096115573560894 7.26689700739367 0.15801440966756444 0.36765007166560715 0.8090026664261165 2.6282052068556666e-07 6.580340728638216 -0.6355138605691303 YQPLASTASDNDFVT(ph)PEPR ddPTM_A549_MK2206_60min_R1 2 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLASTASDNDFVT(1)PEPR;YQPLASTAS(0.002)DNDFVT(0.998)PEPR 264.92 9.335799999999996e-111 22337000.0 3622.1 4883.6 4566.7 4213.2 5874.799999999999 5215.0 4302.9800000000005 4411.4 6542.7 5222.7 6233.2 True False 4233.4219281572105 5132.15438045788 5214.326728953263 5245.434189137737 5010.624702300499 5766.847838563164 5084.775767324705 5036.729459345901 5060.788896544975 4042.8884426773193 4685.324412431633 0.9035493715066167 1.0953679892134398 1.1129062301679733 1.11954556982649 1.0694296192182002 1.230832132618589 1.0852558584488199 1.0750012199756926 1.0801362832245118 0.8628833538079604 1.0 12.193933228384923 -10.259032140296389 0.7268534875900187 1.0010939719299379 1.0922690296874158 0.26288066757918305 0.08388611914080626 0.8965655204013177 0.8893791640370563 0.043494448650341896 0.014429962706553463 5.5076693496747803e-11 10.259032140296389 0.09117505775747792 YQPLASTASDNDFVT(ph)PEPR ddPTM_A549_PD325901_60min_R1 2 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLASTAS(0.001)DNDFVT(0.999)PEPR;YQPLASTASDNDFVT(1)PEPR 169.43 5.2747e-34 48767000.0 7327.6 6871.0 6884.0 8997.0 9956.2 9675.6 8470.2 8463.9 8571.9 8831.0 7731.5 True False 8071.492557705992 7450.043283776594 7351.189636854865 9552.724256330477 9256.910859025369 9596.80512153496 8792.538096071283 8295.080874698899 8211.652852585212 8273.409152892114 6780.574514016583 1.1903847588461518 1.0987333401286434 1.0841543915871326 1.4088369999597228 1.3652104021406717 1.415338051620369 1.296724647431517 1.2233595925465575 1.2110556171324938 1.2201634442316935 1.0 12.727191801889154 -10.109894645005905 0.7092354052050824 1.0066735794155806 1.2624271833427325 0.09929877884304661 0.12224826905844766 0.5175692789615374 0.5082360401605165 0.06691331911049181 0.025134224179987855 7.764354483580589e-11 10.109894645005905 0.25575360392715196 YQQETSVSQLPGRPKS(ph)PLSK ddPTM_A549_MK2206_60min_R1 2 YQQETSVSQLPGRPKSPLSK 20 2 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 YQQETSVSQLPGRPKS(0.999)PLSK;YQQETSVS(0.002)QLPGRPKS(0.984)PLS(0.013)K 118.01 1.0033e-14 10135500.0 3961.2 4374.0 4264.0 3508.5 4940.700000000001 4166.2 4343.0 4063.8 6499.5 6028.6 6241.9 True False 4629.753717958189 4596.617917135463 4868.699317287475 4368.082657502551 4213.9295749057155 4607.064518700261 5132.066883297438 4639.856094865548 5027.373627568752 4666.735072955464 4691.863962323848 0.9867621387012899 0.979699742798764 1.0376897873390265 0.9309909009678682 0.8981354976921764 0.9819262782756416 1.0938226096298753 0.9889153078870299 1.0715088220671107 0.9946441564439694 1.0 12.195945468589898 -7.54489099890216 24.18667049661377 1.0347834227765658 0.9664138151131143 0.320676661585546 0.04405250745465162 140.75772305572195 154661.349075006 0.007006701084059196 0.010393134746150586 2.8517339181414203e-08 7.54489099890216 -0.06836960766345146 YQQETSVSQLPGRPKS(ph)PLSK ddPTM_A549_PD325901_60min_R1 3 YQQETSVSQLPGRPKSPLSK 20 2 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 YQQETSVS(0.002)QLPGRPKS(0.998)PLSK;YQQETSVSQLPGRPKS(1)PLSK;YQQETSVSQLPGRPKS(1)PLSK 283.37 1.5941999999999996e-127 169342300.0 21688.800000000003 19931.5 21531.699999999997 19700.0 26143.199999999997 23396.4 23189.4 23585.899999999998 23812.4 23407.7 25125.800000000003 True False 23890.631009549328 21611.197454605335 22992.97064263042 20916.82425805384 24306.991821143834 23205.867475451687 24071.88530672659 23115.460721719406 22811.647637851616 21929.733827216918 22035.485885569153 1.084188981972714 0.9807452200887623 1.0434519466479437 0.9492336300944507 1.103083995849725 1.0531134913911295 1.0924145458708066 1.0490107112572236 1.0352232647064417 0.9952008292941028 1.0 14.427541088144494 -5.215259271198586 21.389954495873177 1.0271482500483775 1.0841903900865228 0.10662699031500311 0.04420067869850474 7487.619026580751 3467626.4665649803 0.005857024481359094 2.9631861253073657 6.091731159700453e-06 5.215259271198586 0.05704214003814534 YQQITPVNQS(ph)R ddPTM_A549_MK2206_60min_R1 2 YQQITPVNQSR 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 YQQITPVNQS(1)R;YQQITPVNQS(1)R 150.89 8.1217e-12 184306000.0 39368.0 43576.0 42556.0 36845.0 58419.0 45522.0 41330.0 40012.0 55243.0 52774.0 56000.0 True False 46012.35594480915 45793.83227185531 48591.0807097762 45872.026654034926 49825.64248718134 50339.10782494199 48839.12601581463 45683.82353161085 42730.54870494352 40852.31674686519 42093.65447862599 1.09309482663647 1.0879034581116773 1.1543564300041809 1.089761086848078 1.1836853583829707 1.1958835232636504 1.1602491306763068 1.0852900299927117 1.0151304094217082 0.9705100983239381 1.0 15.361315146280436 -8.61999971809326 2.775667843743161 1.0063878847379575 1.1384308095430389 0.7440171724818909 0.036386424278561334 0.1011563476297075 1.5636637224001004 0.0064911929381005875 0.007377374900010378 2.398834476136647e-09 8.61999971809326 0.1320429248050814 YQQITPVNQS(ph)R ddPTM_A549_PD325901_60min_R1 4 YQQITPVNQSR 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 YQQITPVNQS(1)R;YQQITPVNQS(1)R;YQQITPVNQS(1)R;YQQITPVNQS(1)R 159.65 2.4486e-13 319405000.0 68814.0 72900.0 82732.0 80418.0 87569.0 78364.0 81425.0 83926.0 86735.0 87808.0 97045.0 True False 75799.9466218105 79043.53884257235 88346.691027931 85385.23721747073 81418.45553664988 77725.82956550141 84523.67293246975 82252.03009132652 83089.82957908737 82263.78789459301 85109.0802189407 0.8906211467309632 0.9287321474892584 1.038040721397313 1.0032447418985098 0.9566365342828663 0.9132495541668869 0.9931216823755468 0.9664307248972203 0.9762745569020501 0.9665688747072786 1.0 16.377025439639272 -7.224440288965731 0.006226133747456646 1.9317635353333056 1.733346688486824e-05 0.07272562568464347 0.03950285608319376 8502.846135585052 17.424908391033547 2649.198692461953 2756.9134062095754 5.964303172447884e-08 7.224440288965731 -1.9317462018664207 YQQPFEDFRIS(ph)QEHLADHFDSR ddPTM_A549_PD325901_60min_R1 1 YQQPFEDFRISQEHLADHFDSR 22 1 P19174-2;V9GY71;V9GYH5;P19174 P19174-2 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 YQQPFEDFRIS(1)QEHLADHFDSR 62.373999999999995 0.00055388 1417200.0 571.59 735.24 424.5 527.21 619.74 606.64 560.81 635.75 595.72 660.54 730.06 True False 629.6173960176819 797.2012551250044 453.3091227258699 559.7745643192164 576.2116003869332 601.6997249708506 582.151931437007 623.0694675137735 570.6839600721033 618.8333916715386 640.2672482316431 0.9833665516339075 1.2451070351119757 0.7079998609609758 0.8742826778431355 0.8999548266421163 0.9397633982257999 0.9092327196883098 0.9731396838345734 0.8913214937173155 0.9665235780538475 1.0 9.32253040304546 -5.744073329076003 24.999999463165114 0.9258879710500588 1.11423668415056 0.41111920247149936 0.09347163763528768 186.97286310355904 269159.9977427738 0.012419828760187443 0.04787184090080455 1.8027133334374357e-06 5.744073329076003 0.18834871310050116 YQT(ph)LPGR ddPTM_A549_MK2206_60min_R1 2 YQTLPGR 7 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 YQT(1)LPGR;YQT(1)LPGR 65.305 0.026625 43703000.0 1974.84 2078.1 2047.73 1586.89 2603.4 1847.67 1578.9499999999998 1869.55 3014.8 2874.7 2524.5 True False 2308.1447117975727 2183.8664137172395 2338.1289054852427 1975.6781212381986 2220.443308703127 2043.1892130159158 1865.8247767401524 2134.5644377567514 2331.9526136463214 2225.3032734341427 1897.5969773444888 1.2163513851226762 1.1508589230434791 1.2321525241662419 1.0411473799894946 1.170134298912318 1.0767245297129266 0.9832566129775361 1.1248776548663546 1.2288977277512705 1.172695414254005 1.0 10.88995790161185 -11.072771530956684 1.399546272173224 1.000238022695271 1.1430961037799798 0.0 0.09026830956035516 0.43272888962064626 1.5171877548669923 0.057443724701925145 0.012768159840859095 8.457236374920425e-12 11.072771530956684 0.14285808108470888 YQT(ph)LPGR ddPTM_A549_PD325901_60min_R1 2 YQTLPGR 7 0 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9;H0YDE2;Q6IQ23-3;A0A1B0GUM1;A0A1B0GUN0 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 YQT(1)LPGR;YQT(1)LPGR 105.1 0.010498 69528000.0 9447.2 8784.2 8801.3 9754.1 9831.0 8981.6 8795.900000000001 10922.400000000001 10120.9 10529.1 10033.599999999999 True False 10406.272789338933 9524.475362152582 9398.609144516366 10356.588603831628 9140.504475108826 8908.456827439986 9130.632787801165 10704.54416354296 9695.553769377815 9864.290829092557 8799.530808230847 1.1825940514470592 1.0823844554579705 1.0680807135449946 1.1769478202342731 1.0387490735936786 1.0123786167220703 1.0376272311315295 1.2164903330448271 1.1018262201331066 1.12100190840468 1.0 13.103210885834242 -10.547402217698352 0.932186831717301 1.0019989248600345 1.0985580882902815 0.0 0.07168302822010478 0.6169094839048033 0.9892492439321391 0.03773488549687914 0.01155609352638851 2.8352919334779455e-11 10.547402217698352 0.09655916343024695 YQT(ph)QPVTLGEVEQVQSGK ddPTM_A549_MK2206_60min_R1 2 YQTQPVTLGEVEQVQSGK 18 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 YQT(0.962)QPVT(0.038)LGEVEQVQSGK;YQT(1)QPVTLGEVEQVQSGK 238.94 2.2128999999999995e-74 55870000.0 3886.1000000000004 3837.8 5246.6 4694.2 7158.2 4574.1 3809.7 4915.1 6656.6 7607.4 7629.799999999999 True False 4541.978673976902 4033.1276274308375 5990.646772532941 5844.279210730644 6105.238262410205 5058.128225958158 4501.87317644445 5611.830476862456 5148.890728405902 5888.883056431243 5735.110088232512 0.791960154922969 0.7032345613916186 1.0445565438795583 1.0190352270171987 1.0645372396490058 0.8819583492105221 0.7849671771221169 0.978504403669076 0.897784113851723 1.0268125573586195 1.0 12.48560546440323 YQT(ph)QPVTLGEVEQVQSGK ddPTM_A549_PD325901_60min_R1 3 YQTQPVTLGEVEQVQSGK 18 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 YQT(0.994)QPVT(0.006)LGEVEQVQSGK;YQT(1)QPVTLGEVEQVQSGK;YQT(0.997)QPVT(0.003)LGEVEQVQSGK 258.87 5.141499999999999e-87 57820000.0 9499.0 8790.7 10395.9 9712.1 9466.2 9324.3 10826.099999999999 11388.3 10495.2 10525.5 9518.6 True False 10463.331487205794 9531.523139964338 11101.428289625142 10311.994359220545 8801.326768617148 9248.365992261814 11238.093159769236 11161.151422551477 10054.12324204113 9860.918133706935 8347.872543376863 1.2534129423798306 1.141790688637978 1.3298511964503972 1.2352841164785153 1.0543197351042515 1.1078710107522418 1.3462224179123878 1.3370054902678943 1.2043934774756466 1.1812492443395666 1.0 13.02719285803455 -10.365791762847024 0.8592014037198726 1.0067302322747145 1.2210417738595014 0.1191196342376023 0.10381073491198359 0.4302159628343922 0.6010280595847491 0.0532343428998405 0.01839700920715976 4.307330905094708e-11 10.365791762847024 0.21431154158478694 YQTQPVT(ph)LGEVEQVQSGK ddPTM_A549_PD325901_60min_R1 1 YQTQPVTLGEVEQVQSGK 18 0 O95425-4;O95425;A0A6I8PIX7;O95425-3;O95425-2 O95425-4;O95425-3 SVIL Supervillin 1 YQT(0.465)QPVT(0.535)LGEVEQVQSGK 247.28 1.9835999999999995e-75 31124000.0 4406.4 4927.5 5495.1 5721.6 5601.9 5500.0 5847.7 6478.9 6254.1 5807.1 5570.8 True False 4853.734484179767 5342.757718062752 5868.030530720679 6075.010237303593 5208.441869505858 5455.209823519185 6070.237423484224 6349.6732569012765 5991.261926218597 5440.438714954113 4885.626916210769 0.9934721924989438 1.0935664572207098 1.2010803590528458 1.2434453840808817 1.0660744176400314 1.1165833816369624 1.2424684748937447 1.2996639665285787 1.2263036103594551 1.11356000125643 1.0 12.25432798316631 -10.862794768660049 1.165154921718307 1.0019812442990468 1.1718036899997069 0.1298931731057893 0.09222372309935031 0.4545394461529459 1.1156171434786306 0.06032209715701709 0.015369037006128102 1.3715297467430914e-11 10.862794768660049 0.16982244570066007 YQYGGLNSGRPVT(ph)PPR ddPTM_A549_MK2206_60min_R1 6 YQYGGLNSGRPVTPPR 16 1 P62140 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit 1 YQYGGLNSGRPVT(1)PPR;YQYGGLNSGRPVT(1)PPR;YQYGGLNSGRPVT(1)PPR;YQYGGLNS(0.039)GRPVT(0.961)PPR;YQYGGLNS(0.002)GRPVT(0.998)PPR;YQYGGLNSGRPVT(1)PPR 171.07 2.1614e-28 526980200.0 33332.9 33792.4 35320.700000000004 32463.5 45281.700000000004 34675.5 32116.2 37075.200000000004 50500.899999999994 45938.600000000006 46688.4 True False 38958.67860883783 35512.28882098962 40329.70637338548 40417.0589573419 38620.821914305285 38344.83839426596 37951.297821173626 42330.7231380381 39062.52678336591 35561.03835425668 35094.38174571216 1.1101115526446852 1.0119080905401194 1.1491784259260522 1.151667501943671 1.1004844648395604 1.09262042773986 1.0814066506759454 1.2061965771261969 1.1130706637434515 1.013297188476658 1.0 15.098952467732754 -10.508630935986735 0.911336237813732 1.0024834358156067 1.1119847256135518 0.4342031601955193 0.04640754444908359 0.4080209807041738 0.6277904534847042 0.027685698176176117 0.008672190278566267 3.100052608885664e-11 10.508630935986735 0.10950128979794505 YQYGGLNSGRPVT(ph)PPR ddPTM_A549_PD325901_60min_R1 4 YQYGGLNSGRPVTPPR 16 1 P62140 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit 1 YQYGGLNSGRPVT(1)PPR;YQYGGLNS(0.001)GRPVT(0.999)PPR;YQYGGLNSGRPVT(1)PPR;YQYGGLNS(0.002)GRPVT(0.998)PPR 206.7 1.2979e-40 768133000.0 22397.2 23245.600000000002 27148.899999999998 26811.7 29215.399999999998 27465.7 29123.8 28239.199999999997 27896.2 29569.4 30535.4 True False 24670.947256052823 25204.588292440294 28991.38761359805 28467.797815211263 27163.41109165845 27242.028445423814 30232.12214615486 27675.947002776174 26723.819725648664 27702.383037654636 26779.73937984894 0.921254195424212 0.9411812391051906 1.0825866227590444 1.0630349090190379 1.014326939719892 1.017262642440902 1.1289177134002935 1.0334658829279575 0.9979118671243548 1.0344530484303354 1.0 14.70885429998654 -5.618317362471503 7.760829667444117 1.020580999441302 0.9262849496827833 0.4621415305395751 0.04130612844107479 0.1684625167433492 11.658572218204982 0.006293835656757079 0.024643298465409226 2.408145023713621e-06 5.618317362471503 -0.09429604975851869 YQYGGLNSGRPVT(ph)PPRTANPPK ddPTM_A549_MK2206_60min_R1 1 YQYGGLNSGRPVTPPRTANPPK 22 2 P62140 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit 1 Y(0.012)QY(0.011)GGLNS(0.373)GRPVT(0.569)PPRT(0.035)ANPPK 45.332 0.010085 7219100.0 1823.0 2446.2 2501.9 2008.2 3592.6 2407.9 1874.2 2053.3 4076.0 3786.0 3791.2 True False 2130.677831929156 2570.7011314350193 2856.7070407883502 2500.209090151523 3064.1332990884425 2662.702379765339 2214.717879962251 2344.3615629675255 3152.7925080344994 2930.7399705088046 2849.7404082029802 0.7476743586173668 0.9020825630416208 1.0024446551571211 0.8773462603662667 1.0752324282830577 0.9343666433969733 0.7771647808997563 0.8226579362173757 1.1063437564204737 1.0284234880035623 1.0 11.476614790305984 -8.76625019730213 24.999640986757477 1.0502178872272978 0.8995182056951749 0.3502874063272494 0.09207868707734279 101.36250549936862 526733.3670057346 0.016838801600953794 0.018207346488024308 1.7129701800822171e-09 8.76625019730213 -0.15069968153212288 YQYGGLNSGRPVT(ph)PPRTANPPK ddPTM_A549_PD325901_60min_R1 1 YQYGGLNSGRPVTPPRTANPPK 22 2 P62140 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit 1 YQYGGLNS(0.021)GRPVT(0.96)PPRT(0.018)ANPPK 56.303000000000004 0.0017594999999999998 9895300.0 1721.5 1982.2 2379.0 2481.0 2488.7 3044.7 2461.7 2471.6 3015.0 2590.7 2542.1 True False 1896.2654126986824 2149.246950531506 2540.453246089152 2634.245735240183 2313.9022975489092 3019.904972667066 2555.3813405939277 2422.3019990673088 2888.2900349449287 2427.1227598683718 2229.437815699613 0.8505576604762224 0.9640309029462917 1.139503971897929 1.1815739899493622 1.037886000342553 1.3545589616364333 1.1461998727208416 1.0865079895969978 1.2955239274249788 1.0886703108634244 1.0 11.122464244693841 -5.6090880591077426 2.5575210206304395 1.1502281435919892 0.8555946925623318 0.4838287385785519 0.09881161848198551 0.2358527260258978 2.8206655128496383 0.016746481270703554 0.10749907531605436 2.459868781755685e-06 5.6090880591077426 -0.29463345102965743 YRADT(ph)LGELDLER ddPTM_A549_MK2206_60min_R1 2 YRADTLGELDLER 13 1 G3V4F2;A0A087X0W7;A0A087WT95;Q86TX2;P49753 G3V4F2 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial 1 YRADT(1)LGELDLER;YRADT(1)LGELDLER 95.76700000000001 6.6719e-05 8151200.0 859.46 689.22 622.2 624.85 1191.22 686.12 676.95 747.63 1245.4499999999998 1177.29 1107.63 True False 1004.5158362204237 724.2983541033618 710.4373159512821 777.9382780505829 1015.9931159995925 758.7247629904043 799.9430524172691 853.6088420208499 963.3575635749669 911.3393713365853 832.5749019671522 1.2065170759375774 0.8699497815656444 0.8533013837826584 0.9343763260368796 1.2203023579008592 0.9112991049787116 0.9608061094890289 1.0252637210225772 1.1570821571714571 1.094603463524223 1.0 9.701436258758166 -8.52765706603804 24.728078003690797 1.075072175911558 0.9873198240992602 0.09580832347750023 0.11912294874801313 217.34584873117592 1124770.5425967928 0.020749182666133213 0.023570104467315684 2.9671734476211304e-09 8.52765706603804 -0.08775235181229779 YRCS(ph)PER ddPTM_A549_MK2206_60min_R1 2 YRCSPER 7 1 A1L390-3;A1L390;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 Y(0.001)RCS(0.999)PER;Y(0.004)RCS(0.996)PER 54.066 0.012093000000000001 19707200.0 1938.3000000000002 2102.8 1868.85 1508.24 2295.27 2001.47 1654.08 1714.77 2861.6 3296.2 2728.7 True False 2265.437653114802 2209.8235382150115 2133.881031686842 1877.7588677074668 1957.6388235257837 2213.2642269317394 1954.6049252416801 1957.8438987628804 2213.4521690361935 2551.586130689679 2051.0884817111914 1.1045050826987153 1.0773906430264724 1.0403651771797666 0.9154938387352659 0.9544389922625648 1.079068137072881 0.9529598272674143 0.9545389758756196 1.0791597674955224 1.2440156304524368 1.0 11.002174014106629 -5.772151508829079 3.4544204382045156 1.0157267631149578 1.095566858169943 0.07995532327397226 0.08647789125306549 0.2793808136140494 6.872000061805795 0.008212447155834957 0.03359798284338365 1.6898513039428141e-06 5.772151508829079 0.07984009505498513 YRCS(ph)PER ddPTM_A549_PD325901_60min_R1 2 YRCSPER 7 1 A1L390-3;A1L390;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 Y(0.002)RCS(0.998)PER;YRCS(1)PER 74.267 0.005203899999999999 34159000.0 4339.7 4520.6 5279.7 4317.5 3669.2 4196.2 3678.6 4595.5 3347.2 4324.4 4523.2 True False 4780.26314928171 4901.566827047079 5638.0121914152505 4584.182169246063 3411.4880500528207 4162.027538445676 3818.5911360071577 4503.8391473999945 3206.528824201545 4051.3566459932795 3966.8750749272217 1.2050450440185367 1.2356241964935095 1.4212729377465179 1.1556154612028378 0.8599938202277292 1.049195515319331 0.9626194583597305 1.1353619819960235 0.8083261417705153 1.0212967561292834 1.0 11.953787249420088 -6.585846389482222 4.669817103101275 0.9374710609534366 1.2840093796044527 0.633606563760709 0.10191424999609307 0.09088882701500914 3.962473135747944 0.015848361076466096 0.03411481577948761 2.5950970889924625e-07 6.585846389482222 0.34653831865101614 YRDS(ph)FDGR ddPTM_A549_MK2206_60min_R1 2 YRDSFDGR 8 1 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 Y(0.004)RDS(0.996)FDGR;YRDS(1)FDGR 69.786 0.0025706999999999995 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YRDS(ph)FDGR ddPTM_A549_PD325901_60min_R1 2 YRDSFDGR 8 1 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 YRDS(1)FDGR;Y(0.001)RDS(0.999)FDGR 53.013000000000005 0.010637 11436000.0 2587.7 2858.5 2422.3 2330.9 2824.3 2397.9 2622.6 2203.8 2847.6 2887.2 3230.2 True False 2850.401399035945 3099.395826906624 2586.6918444732028 2474.874399142015 2625.9309113060576 2378.372297421212 2722.404478141787 2159.843480152346 2727.9252747957466 2704.901699267365 2832.905877924899 1.0061758215291858 1.0940694680533927 0.9130878172231942 0.8736168816716419 0.9269389893142337 0.8395521771317611 0.9609936211985786 0.7624127215036277 0.9629424316751214 0.9548152377193354 1.0 11.468066954254295 -4.1412189969023006 13.6680592739489 0.9534443918377689 0.9395851167923459 0.0 0.0868858602005081 0.0 0.0 0.011765635192574118 0.0 7.22405432298337e-05 4.1412189969023006 -0.013859275045422947 YRDVS(ph)PFDHSR ddPTM_A549_MK2206_60min_R1 4 YRDVSPFDHSR 11 1 P18031 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 1 Y(0.001)RDVS(0.999)PFDHS(0.001)R;YRDVS(1)PFDHSR;Y(0.014)RDVS(0.979)PFDHS(0.006)R;YRDVS(1)PFDHSR 108.66 3.2401e-05 35271300.0 4269.360000000001 4586.34 4304.9 3595.31 5690.24 4549.37 3929.65 3941.6000000000004 6236.639999999999 6324.75 6897.57 True False 4989.923592169536 4819.765116157994 4915.399552296165 4476.161111399596 4853.213233815347 5030.781313772597 4643.616538786498 4500.333870643742 4824.050997867582 4895.984582270351 5184.713005752436 0.9624300489985114 0.9296107828553803 0.9480562466702654 0.8633382612370825 0.9360620787362212 0.9703104700667033 0.8956361776697008 0.86800057508499 0.9304374210328131 0.9443115900221013 1.0 12.340048417068568 -10.292084851144562 0.8863581182713597 0.9963691330892802 0.9221334236728191 0.16315583133915978 0.036574081686472415 0.40512505463169507 0.6155180669617833 0.017017350583453206 0.006493607638612924 5.1040526879283994e-11 10.292084851144562 -0.07423570941646107 YRDVS(ph)PFDHSR ddPTM_A549_PD325901_60min_R1 3 YRDVSPFDHSR 11 1 P18031 P18031 PTPN1 Tyrosine-protein phosphatase non-receptor type 1 1 YRDVS(1)PFDHSR;YRDVS(0.999)PFDHSR;YRDVS(1)PFDHSR 130.47 2.6031e-08 54281400.0 5910.03 6223.639999999999 6438.52 7266.38 7595.870000000001 7371.0599999999995 6781.629999999999 6942.66 7070.88 7608.66 7651.45 True False 6510.011894865864 6748.127984666478 6875.476685165999 7715.207789453664 7062.362295528927 7311.032531227155 7039.7086407003235 6804.183199888593 6773.715503247558 7128.247909097963 6710.370156537827 0.970141995598148 1.0056267876805371 1.0246046827189272 1.149743994664264 1.0524549511844974 1.08951255455023 1.0490790338654608 1.0139803082635264 1.0094399183997347 1.0622734279647752 1.0 12.712176635032755 -8.324316327880926 3.512973733440156 1.0047659424285866 1.0519184534376806 0.032595038189691006 0.046629070095421624 0.31192616660258243 7.691546738834028 0.007457097111354426 0.009212795704731009 4.7389668651008484e-09 8.324316327880926 0.04715251100909401 YREVRDEDDDWS(ph)SDEF ddPTM_A549_MK2206_60min_R1 1 YREVRDEDDDWSSDEF 16 2 H8Y6P7;P0CAP2;P0CAP1-11;P0CAP2-2;Q9BZD3 H8Y6P7 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 1 YREVRDEDDDWS(0.5)S(0.5)DEF 54.974 0.0042774 5439100.0 208.86 158.93 145.93 140.86 246.23 142.65 131.64 0.0 223.46 125.91 113.07 True False 244.11046186326035 167.01885815508447 166.62506833296464 175.37070632344575 210.00989317890858 157.74512831659356 155.55728402423998 0.0 172.84666679229372 97.46684355170721 84.99159842675432 2.8721716779292548 1.9651219796627448 1.9604887002632616 2.063388729823455 2.470948859255717 1.8560084906808543 1.8302666016841547 0.0 2.033691211740803 1.1467820979470582 1.0 6.4092483301715335 -7.764311509817853 2.832592887950891 1.37848852310251 2.20679691746163 0.4493412564175737 0.5505396943274863 0.25710293370570836 4.250621165643397 0.09436571045389149 0.13944303196951185 1.7206339596084025e-08 7.764311509817853 0.8283083943591201 YREVRDEDDDWSS(ph)DEF ddPTM_A549_PD325901_60min_R1 1 YREVRDEDDDWSSDEF 16 2 H8Y6P7;P0CAP2;P0CAP1-11;P0CAP2-2;Q9BZD3 H8Y6P7 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 1 YREVRDEDDDWS(0.44)S(0.56)DEF 60.56399999999999 0.001368 8266100.0 271.92 123.79 207.9 272.87 172.72 307.29 229.31 264.12 118.61 227.95 323.72 True False 299.52511822307616 134.22221774104278 222.00934420425995 289.7245601672666 160.58874305165244 304.78753212167464 238.03651753324684 258.8519194018683 113.62523417738566 213.55719809780965 283.90449223015565 1.0550207073872475 0.4727724337388488 0.7819860209336928 1.0205000910390412 0.5656435436797047 1.0735565673071124 0.8384387145951725 0.9117570397301861 0.40022344586668945 0.7522149312265307 1.0 8.149261866828907 YRLS(ph)PTLSSTK ddPTM_A549_MK2206_60min_R1 2 YRLSPTLSSTK 11 1 Q8NEM0-2;Q8NEM0-3;Q8NEM0 Q8NEM0-2 MCPH1 Microcephalin 1 YRLS(0.906)PT(0.094)LSSTK;Y(0.001)RLS(0.925)PT(0.073)LS(0.001)STK 86.214 0.00010049 54745000.0 9332.8 9218.4 8673.3 7509.4 11601.0 8960.9 7917.200000000001 8610.8 12942.3 12079.599999999999 14340.6 True False 10907.948474947025 9687.577185030077 9903.304359434671 9349.203337109771 9894.508267751777 9909.136490235986 9355.65275810326 9831.407269469028 10010.889714606212 9350.809970353443 10779.433239574722 1.0119222627494442 0.8987093263367414 0.9187221757704752 0.8673186362698437 0.9179061688907627 0.919263218204868 0.8679169442560012 0.912052336237383 0.9287027891088983 0.8674676824402651 1.0 13.39599370569645 -10.13591213096881 0.7281705182853755 0.9977612329845681 0.9117007898429775 0.0 0.052733297657358985 0.44255437335926834 0.45663337380758595 0.01952667943064524 0.007315948230440702 7.312870268380037e-11 10.13591213096881 -0.08606044314159056 YRLS(ph)PTLSSTK ddPTM_A549_PD325901_60min_R1 3 YRLSPTLSSTK 11 1 Q8NEM0-2;Q8NEM0-3;Q8NEM0 Q8NEM0-2 MCPH1 Microcephalin 1 YRLS(1)PTLSSTK;YRLS(0.999)PT(0.001)LSSTK;YRLS(0.891)PT(0.103)LS(0.005)S(0.001)TK 132.65 2.0411e-08 93893000.0 21228.6 17677.3 18836.8 19114.199999999997 20505.6 18580.6 18643.4 18762.4 19533.3 19389.0 20866.8 True False 23383.711844330654 19167.02810948974 20115.178522880255 20294.840722502162 19065.357396479645 18429.285753978285 19352.88478905992 18388.169213181947 18712.383329880522 18164.775231052554 18300.315885543707 1.2777764050948741 1.0473605061992777 1.0991711098697587 1.1089885469427347 1.0418048254314713 1.0070474121452984 1.057516433601438 1.0048006454198772 1.0225169580084859 0.9925935347051456 1.0 14.159580930931673 -2.0000000000000004 0.4830721842847341 1.013320914912912 7.328118536777083 0.763607987166835 0.03801805666833817 28.814284769874128 0.2854484603585588 0.0067295096967285 184.4232169142837 0.00999999999999999 2.0000000000000004 6.314797621864171 YRLSPT(ph)LSSTK ddPTM_A549_PD325901_60min_R1 1 YRLSPTLSSTK 11 1 Q8NEM0-2;Q8NEM0-3;Q8NEM0 Q8NEM0-2 MCPH1 Microcephalin 1 Y(0.029)RLS(0.392)PT(0.571)LS(0.006)S(0.001)TK 55.724 0.006533499999999999 14892000.0 2499.0 2037.0 2273.3 2490.7 2294.5 2068.9 1805.7 2519.3 2809.8 1986.3 2700.4 True False 2752.696640333434 2208.6651388521227 2427.579808463416 2644.544882209882 2133.3422355952807 2052.051564341608 1874.4169016169542 2469.050585147383 2691.713877342706 1860.8846790159216 2368.2679192459905 1.1623248442303935 0.9326078020578508 1.025044416949375 1.1166578159163059 0.9008027420624329 0.866477794875058 0.7914716432141391 1.0425554326359663 1.1365749016267104 0.7857576686713682 1.0 11.209616585182637 -11.726173826991905 4.327660891758699 0.9986418840608648 1.0266283611107383 0.0 0.13161077512286232 1.8777002718572735 61.82472660721999 0.13240139131408896 0.017673695752272373 1.8785647680548603e-12 11.726173826991905 0.02798647704987345 YRLST(ph)R ddPTM_A549_PD325901_60min_R1 1 YRLSTR 6 1 Q96RF0-3;Q96RF0-2;Q96RF0 Q96RF0-3 SNX18 Sorting nexin-18 1 Y(0.005)RLS(0.047)T(0.948)R 44.11600000000001 0.051193999999999996 5460600.0 505.57 669.28 693.71 661.73 916.58 503.6 665.69 496.12 478.9 633.89 857.76 True False 556.895094219037 725.6825744383646 740.7893322171102 702.6035592021306 852.20258282934 499.49884856804806 691.0231972295455 486.22449740138904 458.77349841961046 593.8660772196556 752.2609577886388 0.7402950910227972 0.9646686657401381 0.984750470627572 0.9339891322653748 1.1328549940096473 0.6639967731894325 0.9185950567750997 0.6463508339322889 0.6098595090834305 0.7894415775150635 1.0 9.555089406464196 -7.272366116412903 24.88659760070062 0.796442609745502 0.9529490803437112 0.28659737022933207 0.13829631802327358 984.9389480091941 2243281.564870625 0.02592154103487365 0.041678223953708224 5.341139039508901e-08 7.272366116412903 0.1565064705982092 YRNEGS(ph)PS(ph)PRQS(ph)PK ddPTM_A549_PD325901_60min_R1 1 YRNEGSPSPRQSPK 14 2 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 Y(0.048)RNEGS(0.978)PS(0.98)PRQS(0.994)PK 46.702 0.0097461 11212000.0 2260.5 1840.8 1871.8 1703.6 2411.4 2109.8 1844.6 2178.7 2631.7 2205.4 2330.8 True False 2489.9842959078524 1995.9306762881624 1998.8316040477825 1808.8275028436817 2242.031582878387 2092.6184883019605 1914.7972624038498 2135.244119342913 2521.098800983271 2066.1506676240815 2044.126376158554 1.218116612039996 0.9764223482302675 0.9778415010739737 0.8848902513762089 1.0968165222209736 1.0237226585934163 0.9367313512201983 1.0445753962412017 1.2333380315365199 1.0107744275121173 1.0 10.997268676936235 -8.534546335135976 24.872190404858493 1.1117015818477336 1.010165125309609 0.05030489848231279 0.10075386606442827 304.9358244204218 650039.3874030607 0.01893502314940144 0.02147832813324015 2.9204761562507725e-09 8.534546335135976 -0.10153645653812471 YRNEGS(ph)PSPR ddPTM_A549_MK2206_60min_R1 4 YRNEGSPSPR 10 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 YRNEGS(0.999)PS(0.001)PR;YRNEGS(0.996)PS(0.004)PR;YRNEGS(0.996)PS(0.004)PR;YRNEGS(0.986)PS(0.014)PR 111.31 4.568e-05 34610600.0 3115.7 2911.09 2992.3 2327.41 3780.2799999999997 3188.2 2685.3 2675.69 3995.42 5696.89 6030.3099999999995 True False 3641.5539884485315 3059.252046729282 3416.653134877887 2897.625554481404 3224.2058197066353 3525.573207844118 3173.1842509137923 3054.9772514569595 3090.46374937468 4409.958592338063 4532.817598910771 0.8033753639951431 0.6749117916115609 0.7537592370138395 0.639254832397778 0.7113027933180913 0.777788457380528 0.7000467549535422 0.6739687147771103 0.6817975093719442 0.9728956650269291 1.0 12.146192392843544 -10.698223244474486 0.8287085018590562 1.0112017596126774 0.7097847594904723 0.8284202148913193 0.04778453557321353 0.19808074830594669 0.22771818200083335 0.03831622937640075 0.008693790900946817 2.0034419145507832e-11 10.698223244474486 -0.3014170001222052 YRNEGS(ph)PSPR ddPTM_A549_PD325901_60min_R1 3 YRNEGSPSPR 10 1 Q5T200;Q5T200-2 Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 YRNEGS(0.943)PS(0.057)PR;YRNEGS(0.994)PS(0.006)PR;YRNEGS(0.999)PS(0.001)PR 119.62 1.5971e-05 27185300.0 6024.32 6225.43 6082.0 6184.21 6979.349999999999 6396.33 6412.16 6613.129999999999 6002.48 7122.8099999999995 7656.91 True False 6635.904531530017 6750.068834248487 6494.761094037082 6566.194606340062 6489.14453345039 6344.240409176455 6656.17825766859 6481.225934249873 5750.216639786478 6673.074561013636 6715.158611151613 0.9881977352716612 1.0051987190650866 0.9671791047871119 0.9778167555768271 0.9663427045005475 0.9447640445366119 0.9912168338979996 0.9651634919667785 0.8563039196479005 0.9937329774954103 1.0 12.713205760981879 -8.542169281755422 24.977274029488925 0.9310166861519006 0.9764224923209681 0.02825162934645664 0.03890649864496756 354.3746789429462 458840.2282457557 0.008781682393298408 0.009958055035266557 2.8696618110140273e-09 8.542169281755422 0.04540580616906753 YRNLWEHY(ph)Y(ph)K ddPTM_A549_MK2206_60min_R1 1 YRNLWEHYYK 10 1 C9IZ13;A0A0J9YXT0;Q9H0F7;Q9H0F7-2 C9IZ13 ARL6 ADP-ribosylation factor-like protein 6 2 Y(0.001)RNLWEHY(0.999)Y(0.999)K 50.909 0.006532 3377000.0 1382.3 1380.9 1127.3 908.12 1862.0 1219.6 1549.7 1436.4 2684.4 1768.3 2067.4 True False 1615.5984460096952 1451.1819116992147 1287.1680910830605 1130.6094407670564 1588.1022665764858 1348.6572624950409 1831.260430358286 1640.0140987905086 2076.3876861059393 1368.8398018623125 1554.007522662703 1.0396336069477061 0.9338319734853647 0.8282894852899886 0.7275443807568073 1.021939883441081 0.8678576151190014 1.178411560853017 1.055345019167242 1.336150344078237 0.8808450293193457 1.0 10.601777772244201 -7.76239308547761 24.999998680931515 1.1547118509043144 0.8985861894087316 0.2580854073555746 0.1394104921439014 18.72521260161894 490861.47796792106 0.022225932309215615 0.03167969579053366 1.7282513886983905e-08 7.76239308547761 -0.2561256614955828 YRPAS(ph)ASVSALIGGR ddPTM_A549_MK2206_60min_R1 4 YRPASASVSALIGGR 15 1 P46108-2 P46108-2 CRK Adapter molecule crk 1 YRPAS(1)ASVSALIGGR;YRPAS(0.906)AS(0.093)VSALIGGR;YRPAS(0.999)AS(0.001)VSALIGGR;YRPAS(0.968)AS(0.032)VSALIGGR 216.0 8.992000000000001e-46 337451000.0 10248.939999999999 12477.16 11446.029999999999 10623.86 16620.199999999997 11709.69 10505.83 11805.0 18796.8 15868.6 18149.1 True False 11978.7105094745 13112.194149740732 13069.249166663218 13226.706176923197 14175.390596645804 12948.801623536858 12414.603321333798 13478.394901296266 14539.354812321613 12283.872238778657 13642.177580321977 0.8780644027646343 0.9611511118763243 0.9580031552671493 0.969545081717887 1.0390856234779522 0.949174099757705 0.910016252774859 0.9879943888678038 1.0657649577362018 0.900433392429769 1.0 13.735786326960408 -8.53745663380352 9.123415039052551 1.0308762965816372 0.9560665022726926 0.0 0.05603754213469879 0.1539178334116099 82.41652132911587 0.007338452183895133 0.008386659163634843 2.900970858812389e-09 8.53745663380352 -0.07480979430894452 YRPAS(ph)ASVSALIGGR ddPTM_A549_PD325901_60min_R1 4 YRPASASVSALIGGR 15 1 P46108-2 P46108-2 CRK Adapter molecule crk 1 YRPAS(0.998)AS(0.002)VSALIGGR;YRPAS(0.953)AS(0.047)VSALIGGR;YRPAS(1)ASVSALIGGR;YRPAS(0.997)AS(0.003)VSALIGGR 236.75 1.7382999999999998e-64 545590000.0 13755.8 16565.9 15674.2 17656.6 19804.9 17083.8 17149.399999999998 18668.1 18289.0 19108.3 18871.0 True False 15152.278689515259 17961.966531031114 16737.945468621514 18747.20808095194 18413.87214719587 16944.675196915836 17802.029801511762 18295.75010065886 17520.376931710707 17901.798676957114 16549.986633125125 0.9155462796077233 1.0853160748226758 1.0113570385078248 1.132762732474299 1.112621572173366 1.0238482708500038 1.0756522162912596 1.1054842826301476 1.0586339022560494 1.0816805520027617 1.0 14.014542431365514 -5.251594736415039 24.31508469167196 1.0493478580340538 0.9155461722863524 0.44681196708393633 0.04447564480598529 743.8246705546388 1837102.2998632803 0.006716197217828396 0.11892653061540005 5.6028018526572056e-06 5.251594736415039 -0.13380168574770146 YRPETK ddPTM_A549_MK2206_60min_R1 2 YRPETK 6 1 P62424;Q5T8U3 P62424 RPL7A 60S ribosomal protein L7a 0 ; 86.113 0.039945999999999995 17082400.0 4231.3 5287.8 4760.0 4535.4 6202.6 5015.1 4577.7 4788.1 7293.5 6317.9 6759.0 False True 4945.439994647197 5556.92643398009 5435.039575583579 5646.573203601841 5290.205756534535 5545.794553246049 5409.408835291426 5466.827837941265 5641.533895326207 4890.682002027885 5080.553761089878 0.973405700875076 1.093763927180257 1.0697730663158374 1.1114090056180295 1.0412655795614851 1.0915728509201656 1.0647281949302712 1.0760299162287623 1.1104171239231189 0.9626277433542476 1.0 12.31077003851733 -10.982786967843536 1.258136792692769 1.0000485838688549 1.0757951244412913 0.41217031243250746 0.038849570945394055 0.3823190491878379 1.0777713288068125 0.02469200140774235 0.005688847066346431 1.040430397453312e-11 10.982786967843536 0.07574654057243646 YRPETK ddPTM_A549_PD325901_60min_R1 1 YRPETK 6 1 P62424;Q5T8U3 P62424 RPL7A 60S ribosomal protein L7a 0 75.311 0.046360000000000005 17254000.0 2535.5 2178.6 2602.6 2473.3 2863.6 2619.1 2433.5 2781.2 2670.7 3066.4 2670.6 False True 2792.902093463553 2362.198267797366 2779.228086705181 2626.070123728151 2662.470614883698 2597.770917959837 2526.1081741622966 2725.726784190809 2558.459766609425 2872.786980684903 2342.133130328227 1.1924608628341102 1.0085670354128535 1.1866225923356029 1.1212300828348443 1.136771680656163 1.1091474196412503 1.07855020769391 1.1637796113702663 1.0923630828154 1.2265686111029523 1.0 11.193607367762338 -10.14918471140443 0.5621250381786583 0.993829909149172 1.1238932240371808 0.0 0.08309458744498759 0.5873967381648632 0.3417936428486836 0.036358949450728956 0.010914129123186836 7.09276038968053e-11 10.14918471140443 0.13006331488800882 YRPGT(ph)VALR ddPTM_A549_MK2206_60min_R1 2 YRPGTVALR 9 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 1 YRPGT(1)VALR;Y(0.001)RPGT(0.999)VALR 71.085 0.0012923 10866100.0 1890.37 2002.71 1212.1100000000001 1530.73 2080.41 1624.69 1423.8200000000002 1704.5300000000002 2526.9 2385.33 2445.52 True False 2209.4182408907946 2104.639384733965 1384.0054243614725 1905.75891871708 1774.3844449024625 1796.6136174180615 1682.5096637753977 1946.1523474041949 1954.5611846301222 1846.4822963163663 1838.2298910815969 1.2019270558106276 1.1449271905243665 0.7529011638186 1.036735899009753 0.965267975192391 0.9773606805843806 0.9152879473553904 1.0587099888029226 1.063284409699201 1.0044893216429605 1.0 10.84410148762388 -13.228681620220847 13.81048070570831 0.40774277315972285 1.0169067437790955 0.0 0.11265762903067111 0.0 0.0 0.0 0.014057211158132098 5.906339131725217e-14 13.228681620220847 0.6091639706193727 YRPGT(ph)VALR ddPTM_A549_PD325901_60min_R1 2 YRPGTVALR 9 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 1 YRPGT(1)VALR;YRPGT(1)VALR 113.22 9.758799999999999e-05 24439000.0 4642.7 3613.1000000000004 3757.6 3057.2 4809.0 3968.6 4062.5 3966.8999999999996 4337.0 4159.299999999999 4154.6 True False 5114.023486224901 3917.588617175555 4012.6133322844016 3246.036300595034 4471.232430149354 3936.2810373851376 4217.100660585299 3887.777067527151 4154.730972323764 3896.681088169422 3643.6105381793036 1.4035593081746756 1.0751941175176085 1.1012739397469982 0.8908845406449681 1.2271433467704287 1.08032430912665 1.1573961092703848 1.067012246997687 1.1402785585310842 1.0694559825586014 1.0 11.831153043838997 -14.999996610202947 0.01712633457027052 2.054216270983166e-06 1.94574856897323 0.13832667875722904 0.11500181888224008 4933.5503767472865 6.5689213653838365 478.93097762330444 289.6923932749895 1.0000078053266236e-15 14.999996610202947 1.9457465147569588 YRPGTVALR ddPTM_A549_MK2206_60min_R1 5 YRPGTVALR 9 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 ;;;; 157.59 1.1859000000000001e-05 257507500.0 7957.872 8449.81 6986.740000000001 6598.815 9701.23 7345.4349999999995 6768.22 7462.4800000000005 10832.2 10217.89 9563.380000000001 False True 9300.966242309234 8879.869236943397 7977.564790822022 8215.52497123206 8274.191918141674 8122.724056194867 7997.9179647412775 8520.309392886522 8378.723995468914 7909.661552367193 7188.528810139328 1.2938622752948197 1.2352832507840068 1.1097632076774553 1.142865972748717 1.1510271623967108 1.1299563889537272 1.1125945483393371 1.185264692946453 1.1655686743093845 1.100317152685083 1.0 12.811480826468182 -14.999999999999998 0.1807410858766187 0.2933029543354549 1.2046962904740783 0.3839230892627167 0.056918885932872795 25.870348559841748 0.28804753602494293 6.477077208178072 0.05879200918434331 1.000000000000004e-15 14.999999999999998 0.9113933361386235 YRPGTVALR ddPTM_A549_PD325901_60min_R1 6 YRPGTVALR 9 1 K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;Q6NXT2;K7EP01;P68431;Q71DI3;Q16695;Q5TEC6 K7EK07;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST1H3A;HIST2H3A;HIST3H3;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.1;Histone H3.2;Histone H3.1t 0 ;;;;; 166.34 1.5391999999999998e-06 508661400.0 13866.699999999999 14146.800000000001 12891.700000000003 14558.5 16104.400000000001 14299.5 14777.9 14793.8 16142.800000000001 16417.1 16179.5 False True 15274.43717587499 15339.000484198918 13766.608286089751 15457.745480247557 14973.282501163925 14183.049612984107 15340.281071277162 14498.72605348842 15464.374254099164 15380.521504240187 14189.524070300888 1.0764587381647888 1.0810088067931694 0.9701952100637179 1.0893773042466657 1.0552350048514643 0.9995437156817449 1.0810990555620428 1.0217908635734092 1.0898444639497513 1.0839349810493006 1.0 13.7925385804397 -11.093019861720384 1.4340117521710234 1.000090814880893 1.054937605800112 0.0 0.04491323710007337 0.5026745452497043 1.8520780438036681 0.02613840775421597 0.0057577071924881425 8.071981135701656e-12 11.093019861720384 0.05484679091921918 YRPS(ph)MEGYR ddPTM_A549_MK2206_60min_R1 2 YRPSMEGYR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 Y(0.005)RPS(0.995)MEGYR;YRPS(1)MEGYR 73.435 0.00062258 12709800.0 1960.84 2183.54 1880.84 1668.22 2981.1 2085.98 2026.19 2039.4499999999998 3108.2 3000.3999999999996 3485.2 True False 2291.7818540647104 2294.672859346587 2147.571393979121 2076.9339748892407 2542.584139039292 2306.71701903854 2394.322495571823 2328.5482830536794 2404.1976627754725 2322.607556131701 2619.728653373344 0.874816500981372 0.8759200524038271 0.8197686394786571 0.7928049999433479 0.9705524790765199 0.8805175360693374 0.9139582042165807 0.8888509426559423 0.9177277424055583 0.8865832547737151 1.0 11.35520167249129 -10.717879606420224 0.1658964114199353 1.1079922493093002 0.8218708722853699 0.1144767050867781 0.05289268210062434 5.749594804935084 0.2615352349857515 0.3878546317585228 0.09743115120554581 1.9147866618372356e-11 10.717879606420224 -0.28612137702393026 YRPS(ph)MEGYR ddPTM_A549_PD325901_60min_R1 2 YRPSMEGYR 9 1 O60716-3;O60716-5;O60716;C9JZR2;A0A669KB05;O60716-2;O60716-13;O60716-11;O60716-9;O60716-10;O60716-19;O60716-21;O60716-17;O60716-18;O60716-8;O60716-7;A0A669KB62;O60716-6;O60716-4;O60716-15;O60716-16;O60716-23;O60716-14;O60716-12;O60716-24;O60716-22;O60716-20 O60716-3;O60716-8 CTNND1 Catenin delta-1 1 YRPS(1)MEGYR;YRPS(1)MEGYR 107.12 0.00013911 18455600.0 3350.8999999999996 4087.6 3799.8 3849.7999999999997 3765.4 3518.6 4406.4 4014.5 4252.1 4253.0 4547.5 True False 3691.080901197801 4432.076397433448 4057.6772780536194 4087.593402469829 3500.9312939248066 3489.945688188113 4574.0879632746 3934.427648185676 4073.3990240760636 3984.464854178481 3988.186328977613 0.9255036241358422 1.1113012361610566 1.0174241982053585 1.0249253834430798 0.8778254086293616 0.8750708718974959 1.1469092930889178 0.9865205192642746 1.021366277317413 0.9990668753934357 1.0 11.961517099015124 -8.763062979796517 24.193838317704696 1.0100896270440138 0.9983299366863685 0.0025401037756836997 0.08057632526714811 256.41196469121564 3820787.6417070045 0.013774851075680654 0.01505987130798009 1.7255876354406856e-09 8.763062979796517 -0.011759690357645347 YRQDDDQR ddPTM_A549_MK2206_60min_R1 2 YRQDDDQR 8 1 Q7KZF4;H7C597 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 ; 92.06200000000001 0.0026224 11334700.0 1036.77 1105.16 940.93 813.52 1524.56 1067.07 1024.78 989.65 1684.54 1484.69 1508.8899999999999 False True 1211.751429407127 1161.4079234799792 1074.3680226583724 1012.8324365203007 1300.29924357242 1179.986639136261 1210.9692610328218 1129.9359181760149 1302.9943796576144 1149.2974978380125 1134.190969754535 1.0683839509579043 1.023996799878714 0.9472549608562748 0.8929999122982798 1.1464552956666854 1.0403773884671619 1.0676943242590826 0.9962483817170216 1.1488315587097404 1.0133192103325834 1.0 10.147447859617618 -6.766428913670414 24.99721739215159 1.0679925776983417 0.9835113349841348 0.2399571054918327 0.06364870333038032 138.4118640233127 693437.0025897752 0.010358108830548418 0.0200144824705545 1.7122654213481364e-07 6.766428913670414 -0.08448124271420687 YRS(ph)DIHTEAVQAALAK ddPTM_A549_MK2206_60min_R1 2 YRSDIHTEAVQAALAK 16 1 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 Y(0.019)RS(0.956)DIHT(0.025)EAVQAALAK;Y(0.001)RS(0.974)DIHT(0.025)EAVQAALAK 108.92 2.5177e-07 33799000.0 1825.5900000000001 1833.79 2096.59 2065.7 2939.7 2363.42 1985.18 1923.12 2984.6 3156.8 3307.0 True False 2133.7049606097376 1927.122078249621 2393.917988187558 2571.7965927327964 2507.2740241970423 2613.515535688773 2345.8615094138627 2195.728149307995 2308.5928654268314 2443.6766875071835 2485.7806314431473 0.8583641426842206 0.7752583047245037 0.9630447505730796 1.0346031987704851 1.0086465364167783 1.0513862336160644 0.9437122004011862 0.8833153342389835 0.9287194679309061 0.9830620838366095 1.0 11.27948326975186 -5.773829433213798 23.52219293646315 0.9715456739652524 0.8168112589941309 0.6117035507358801 0.04916433955598743 51.827125853419645 98394.17218972868 0.007468944993972799 0.023499410468049358 1.683335051911096e-06 5.773829433213798 -0.1547344149711215 YRS(ph)DIHTEAVQAALAK ddPTM_A549_PD325901_60min_R1 4 YRSDIHTEAVQAALAK 16 1 Q9P265 Q9P265 DIP2B Disco-interacting protein 2 homolog B 1 Y(0.045)RS(0.926)DIHT(0.029)EAVQAALAK;YRS(0.629)DIHT(0.371)EAVQAALAK;Y(0.007)RS(0.988)DIHT(0.004)EAVQAALAK;YRS(0.889)DIHT(0.111)EAVQAALAK 190.63 4.7781e-35 135402000.0 19382.9 20586.3 20057.4 20754.8 23025.5 20963.3 22136.8 22171.5 22327.1 22262.1 24950.6 True False 21350.637739063182 22321.179748626135 21418.615778944324 22036.776858429235 21408.268313662724 20792.581835159956 22979.22803772175 21729.272039294716 21388.769631581716 20856.467206726244 21881.834374884853 0.975724309638713 1.0200780869745338 0.9788309065865066 1.0070808726951255 0.9783580273431888 0.9502211505185735 1.0501508988705464 0.9930279000847734 0.9774669374214322 0.9531407124927567 1.0 14.417446065240224 YRS(ph)DVHTEAVQAALAK ddPTM_A549_MK2206_60min_R1 2 YRSDVHTEAVQAALAK 16 1 Q9Y2E4;A0A0U1RQW6;E7EPU2 Q9Y2E4 DIP2C Disco-interacting protein 2 homolog C 1 YRS(0.998)DVHT(0.002)EAVQAALAK;YRS(0.971)DVHT(0.029)EAVQAALAK 175.33 8.614899999999999e-29 19692300.0 4625.799999999999 5607.299999999999 5376.2 5391.0 6103.5 4941.0 4690.4 4223.4 7023.4 6824.1 8119.7 True False 5406.521950048211 5892.68761928525 6138.626001313533 6711.795242011185 5205.68323525756 5463.853340429646 5542.584966479 4822.079883620046 5432.6111140651365 5282.53107045672 6103.354397680351 0.8858279558701393 0.9654834432561924 1.0057790521957217 1.0996895812837082 0.8529216716034119 0.8952213790020526 0.9081211093666005 0.7900704382253686 0.8901025174172847 0.8655127535219659 1.0 12.575386649107706 -6.787057083942623 24.999930442318515 0.9221973626962596 0.9886860825029011 0.23866213158698146 0.0721180313928362 354.6470884950816 346094.00609947275 0.01177533828933046 0.022258611363512266 1.6328373126149776e-07 6.787057083942623 0.0664887198066415 YRS(ph)DVHTEAVQAALAK ddPTM_A549_PD325901_60min_R1 2 YRSDVHTEAVQAALAK 16 1 Q9Y2E4;A0A0U1RQW6;E7EPU2 Q9Y2E4 DIP2C Disco-interacting protein 2 homolog C 1 YRS(0.76)DVHT(0.24)EAVQAALAK;YRS(0.994)DVHT(0.005)EAVQAALAK 161.68 4.6304e-21 32791000.0 5687.2 6225.5 6718.6 6434.200000000001 7443.1 6163.4 6300.5 7893.6 5754.5 6674.6 8354.7 True False 6264.560357304637 6750.144733394148 7174.564598223862 6831.625920871573 6920.322333301037 6113.207313868758 6540.268975265891 7736.1559555905915 5512.658376812796 6253.164616905637 7327.124864806878 0.8549820663483061 0.9212542242614099 0.9791786997768003 0.9323747099881906 0.9444799237065326 0.8343255269514075 0.8926105526984592 1.0558242282383288 0.7523630999235188 0.8534267850327473 1.0 12.83903148615938 YRS(ph)PEPDPYLSYR ddPTM_A549_MK2206_60min_R1 7 YRSPEPDPYLSYR 13 1 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 Y(0.001)RS(0.999)PEPDPYLSYR;Y(0.001)RS(0.998)PEPDPY(0.001)LS(0.001)YR;Y(0.052)RS(0.948)PEPDPYLSYR;YRS(1)PEPDPYLSYR;YRS(0.994)PEPDPYLS(0.006)YR;YRS(1)PEPDPYLSYR;Y(0.006)RS(0.994)PEPDPYLSYR 122.46 2.0547e-06 280987300.0 11962.95 14133.54 12061.25 12522.529999999999 16284.91 13023.58 13226.289999999999 11972.3 19266.609999999997 19356.510000000002 21623.3 True False 13982.003493953323 14852.876816769727 13771.716613657029 15590.550412157725 13889.421311489823 14401.726591247269 15629.335689129182 13669.410188631036 14902.753597454015 14983.86094731997 16253.637837279883 0.8602384053300202 0.9138186149750843 0.8473005705879433 0.9592037529222364 0.8545423154213875 0.8860617380199645 0.9615900049945262 0.8410061996877046 0.9168872683549381 0.921877372765898 1.0 13.9884750332248 -10.265187706325138 0.5084611302459062 1.0114016225717917 0.8893378547202851 0.17355132917623994 0.04586344549379332 0.6751386920997094 0.2976294813869586 0.0382964978713448 0.00950580560985436 5.4301558411655825e-11 10.265187706325138 -0.12206376785150652 YRS(ph)PEPDPYLSYR ddPTM_A549_PD325901_60min_R1 4 YRSPEPDPYLSYR 13 1 H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761 H3BRT8 CLK3 Dual specificity protein kinase CLK3 1 YRS(1)PEPDPYLSYR;YRS(1)PEPDPYLSYR;YRS(1)PEPDPYLSYR;Y(0.004)RS(0.996)PEPDPYLSYR 153.18 1.4432e-13 424729000.0 16363.399999999998 16833.4 16517.6 17555.2 20138.8 18698.4 17684.5 18108.8 20342.4 20075.3 21262.5 True False 18024.6003219016 18252.00969482244 17638.583664397705 18639.54483324806 18724.320163088345 18546.126429834774 18357.493324829717 17747.605777921224 19487.479670601566 18807.742131927876 18647.347294092677 0.9666039913147132 0.9787992579837094 0.9459031027960455 0.9995815779734477 1.0041278187069564 0.9945718357329051 0.9844560212939895 0.9517496241164295 1.0450537206852493 1.0086014828439438 1.0 14.186682791914384 -8.764747243138778 24.999959174577523 1.0212753673558617 0.9794939771357078 0.42895532271828973 0.020238835930195202 62.991057793798 476067.833050774 0.00405890720569344 0.0044078907276635946 1.7189084908410958e-09 8.764747243138778 -0.04178139022015381 YRS(ph)PYR ddPTM_A549_MK2206_60min_R1 2 YRSPYR 6 1 Q14498-3 Q14498-3 RBM39 RNA-binding protein 39 1 Y(0.013)RS(0.987)PY(0.001)R;Y(0.003)RS(0.994)PY(0.003)R 57.177 0.020574000000000002 60533000.0 3801.05 4069.1 4003.91 3649.86 5397.14 3826.3500000000004 3787.51 3580.17 5545.9 5701.59 5420.1 True False 4442.574313249765 4276.199809468661 4571.7246443434515 4544.075863848439 4603.227855548129 4231.251817274435 4475.651540676463 4087.670061310791 4289.762504982466 4413.596859073768 4074.1395828500135 1.0904325251767681 1.0495958036070279 1.1221325512724232 1.1153461415452262 1.1298650333251465 1.0385632920103625 1.098551350453628 1.0033210640395664 1.0529247753415498 1.0833199916990306 1.0 11.992279693546113 -8.708306863717922 0.43679279138955907 1.006345481856308 1.100836967589891 0.2056265611940179 0.038749583686596464 0.5350514938506955 0.2565329620660466 0.015347097089193419 0.015101884723603383 1.9574610822507355e-09 8.708306863717922 0.09449148573358301 YRS(ph)PYR ddPTM_A549_PD325901_60min_R1 2 YRSPYR 6 1 Q14498-3 Q14498-3 RBM39 RNA-binding protein 39 1 Y(0.018)RS(0.978)PY(0.004)R;Y(0.006)RS(0.994)PYR 60.403999999999996 0.01781 114979000.0 5801.0 5483.6 6335.0 6037.0 6152.2 6727.900000000001 5969.6 5861.5 6511.4 6264.4 7586.5 True False 6389.913249529511 5945.722216695876 6764.931195449669 6409.891778978224 5720.090695937795 6673.110213028138 6196.776394690466 5744.587784242202 6237.748502003447 5868.864714910805 6653.408594785847 0.9603969391774868 0.893635515088526 1.0167617243214584 0.9633996901981245 0.8597233454774632 1.0029611315706255 0.9313686821438811 0.8634052309284191 0.9375267448465221 0.8820839170331618 1.0 12.699877918948888 -10.446108892485555 0.9849221454675794 0.9969449883907339 0.9368243454081348 0.0 0.05892085368344424 0.6393972910266353 1.1866512688724482 0.023698209315327862 0.008496457073451381 3.5800666132935044e-11 10.446108892485555 -0.060120642982599115 YRS(ph)PYSGPK ddPTM_A549_MK2206_60min_R1 6 YRSPYSGPK 9 1 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23 G3XAC6 RBM39 RNA-binding protein 39 1 Y(0.021)RS(0.977)PYS(0.001)GPK;Y(0.188)RS(0.806)PY(0.004)S(0.002)GPK;YRS(1)PYSGPK;YRS(0.999)PYS(0.001)GPK;Y(0.016)RS(0.983)PY(0.001)S(0.001)GPK;Y(0.092)RS(0.892)PY(0.009)S(0.007)GPK 135.16 3.7873e-05 5291099000.0 66913.9 69716.8 71500.5 66056.1 92700.9 74632.0 72807.0 72813.5 98784.0 100088.3 96023.7 True False 78207.33043221301 73265.08733547083 81640.34604496081 82239.84746537109 79064.72041013958 82529.50870328781 86035.08947092705 83135.03660699153 76409.58172563299 77478.28351565675 72178.36517070066 1.0835287034730414 1.0150560650992868 1.1310916484722633 1.139397481099429 1.0954074704123984 1.143410612142667 1.1919789159460104 1.1517999390867126 1.058621673474116 1.073428074083167 1.0 16.139278846325283 -9.157816767030624 1.8929825555431061 1.0196466602359149 1.118291009785569 0.3033844915487439 0.047380578136358945 0.20702718485095176 1.5310185196097224 0.010076941724881506 0.009445311228159834 6.953176168222963e-10 9.157816767030624 0.09864434954965406 YRS(ph)PYSGPK ddPTM_A549_PD325901_60min_R1 11 YRSPYSGPK 9 1 G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23 G3XAC6 RBM39 RNA-binding protein 39 1 Y(0.023)RS(0.958)PY(0.007)S(0.012)GPK;Y(0.001)RS(0.99)PYS(0.009)GPK;Y(0.008)RS(0.989)PY(0.001)S(0.002)GPK;YRS(0.999)PYS(0.001)GPK;Y(0.023)RS(0.971)PY(0.003)S(0.003)GPK;Y(0.321)RS(0.666)PY(0.011)S(0.002)GPK;Y(0.01)RS(0.982)PY(0.007)S(0.002)GPK;YRS(0.996)PYS(0.004)GPK;Y(0.032)RS(0.879)PY(0.039)S(0.051)GPK;Y(0.015)RS(0.984)PY(0.001)SGPK;Y(0.103)RS(0.895)PY(0.002)S(0.001)GPK 126.66 4.8377e-05 8220659700.0 87253.29999999999 90471.29999999999 91960.89999999998 98810.09999999999 101045.09999999999 98753.1 96295.40000000001 96972.4 108777.09999999999 101880.6 104065.40000000001 True False 96111.19078351551 98095.63396005484 98201.91967981483 104913.3754629811 93948.04076267104 97948.88749508599 99959.97414186459 95038.20940862384 104205.57676955475 95447.84152894809 91266.01552492294 1.05308849335347 1.0748319995767412 1.075996570190991 1.1495338638327137 1.0293868996287636 1.0732241013451287 1.0952595395661542 1.0413318567925296 1.1417785269819112 1.0458201881606541 1.0 16.47779012737156 -11.07647679659832 1.4034877768208311 1.0001150363717999 1.088306337331288 0.22211952311552507 0.03799845811462421 0.32583278028071294 1.148324426968879 0.026785656115501915 0.005933948240637797 8.385388787182316e-12 11.07647679659832 0.08819130095948813 YRSDS(ph)QDEVEK ddPTM_A549_MK2206_60min_R1 2 YRSDSQDEVEK 11 1 H0YBZ4;Q15390-2;Q15390;H7C5V5;H0YF01 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 YRS(0.014)DS(0.986)QDEVEK;YRS(0.06)DS(0.94)QDEVEK 116.96 5.0956e-06 75961000.0 4183.9 4928.2 5293.9 4797.5 7567.0 5948.2 5958.6 6112.7 9368.4 9490.2 10199.2 True False 4890.0400334659325 5179.024329955874 6044.654623777712 5972.887715367959 6453.904323944283 6577.634575904398 7041.200490632305 6979.193944358632 7246.47235826065 7346.357228769849 7666.457156400041 0.6378487394772271 0.6755433734645434 0.7884547582362172 0.7790936013229693 0.8418366126987997 0.8579757822572996 0.9184425539708698 0.9103545225622667 0.9452178771013175 0.9582466945161274 1.0 12.904344314317152 -3.9743444777633066 0.22616310509811577 1.0089845275666631 3.867844845509673e-22 0.9667100708659806 0.020278262411687557 1.667002362887295 0.04209211853155995 0.01041386904216795 0.5208999798725352 0.00010608537654706303 3.9743444777633066 -1.0089845275666631 YRSDS(ph)QDEVEK ddPTM_A549_PD325901_60min_R1 2 YRSDSQDEVEK 11 1 H0YBZ4;Q15390-2;Q15390;H7C5V5;H0YF01 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 YRS(0.001)DS(0.999)QDEVEK;YRS(0.002)DS(0.998)QDEVEK 153.41 5.2189e-13 161662000.0 20100.9 19396.3 20971.3 20583.1 25634.0 22246.6 22843.6 23962.9 24801.0 24914.0 25707.0 True False 22141.52857049951 21030.89427232077 22394.53852867145 21854.47133938822 23833.55627249918 22065.431065436733 23712.925698497555 23484.941160968603 23758.700217800702 23340.925788150158 22545.201970099508 0.9820949308799555 0.9328323738333734 0.993317272489824 0.9693624110519228 1.0571453874801542 0.9787196005030663 1.0517947778843026 1.0416824472060806 1.053825122050829 1.0352945970103073 1.0 14.460532813896398 -6.741138327288385 24.515955163139115 1.027482222074906 0.9684978613481559 0.5576288641454538 0.02634449495162062 127.60930456615714 154102.46282675027 0.004058309054147002 0.008439306620238406 1.8149374943211858e-07 6.741138327288385 -0.058984360726750173 YRSDVHT(ph)EAVQAALAK ddPTM_A549_PD325901_60min_R1 1 YRSDVHTEAVQAALAK 16 1 Q9Y2E4;A0A0U1RQW6;E7EPU2 Q9Y2E4 DIP2C Disco-interacting protein 2 homolog C 1 YRS(0.215)DVHT(0.785)EAVQAALAK 151.96 2.1026e-15 15614000.0 5702.9 5216.4 5464.2 5835.2 6356.5 5284.1 5456.8 5581.5 6504.1 6734.0 6020.8 True False 6281.854209746916 5656.004334957389 5835.033470903885 6195.627051299276 5910.041368734538 5241.068041537772 5664.461510075536 5470.172603897958 6230.755295617017 6308.814090768368 5280.2797689958 1.1896820783307842 1.0711561853536113 1.1050614221552106 1.173352042381943 1.1192667107217513 0.9925739299481313 1.0727578381993195 1.035962646528154 1.1800047664523612 1.1947878458660108 1.0 12.366398655656793 -11.094031892540901 1.4292442087788322 1.0000626169550282 1.110072528009977 0.0 0.08172340878774759 0.4297235158158184 1.5700720380576954 0.04479937242383883 0.009816732231609846 8.053193001718223e-12 11.094031892540901 0.11000991105494884 YRSS(ph)PTVYNSPTDKEDYMTDLR ddPTM_A549_PD325901_60min_R1 1 YRSSPTVYNSPTDKEDYMTDLR 22 2 Q96SK2-3;Q96SK2-2;Q96SK2 Q96SK2-3 TMEM209 Transmembrane protein 209 1 YRS(0.224)S(0.725)PT(0.052)VYNSPTDKEDYMTDLR 135.57 9.940100000000002e-23 17860000.0 2100.7 2226.7 1795.4 2220.6 2781.8 2948.7 2607.5 2912.4 2328.5 2469.5 3037.8 True False 2313.9615175463964 2414.3518236043305 1917.2466406172598 2357.7614186514907 2586.415964689016 2924.686764838369 2706.7298393787482 2854.3098972663993 2230.6412425768717 2313.575348552494 2664.169858200811 0.8685487940731675 0.9062304402898733 0.7196412926584307 0.8849891501451612 0.9708149638911145 1.0977853967665157 1.0159749503384439 1.071369337987329 0.8372744086532404 0.8684038449841619 1.0 11.37947035121988 -6.577906329293908 5.1286210536546 0.9558203697966474 0.8333136350427878 0.3554841715443746 0.08561274457015787 0.21820015603879803 12.086358142528827 0.01409031772184507 0.030129280402656236 2.6429787461177137e-07 6.577906329293908 -0.12250673475385965 YRT(ph)IDEHDAII ddPTM_A549_MK2206_60min_R1 1 YRTIDEHDAII 11 1 E9PKT4;Q8N131-2;Q8N131 E9PKT4 TMEM123 Porimin 1 Y(0.001)RT(0.999)IDEHDAII 68.03399999999999 0.0017059000000000002 1553000.0 137.11 150.12 133.58 0.0 170.76 126.01 89.26 118.25 174.72 178.55 218.39 True False 160.2508159823405 157.760466785637 152.52365262740634 0.0 145.6414302044042 139.34429456133162 105.47738659984552 135.012299625437 135.14619897050733 138.2154309916395 164.15773574262732 0.976200209252324 0.9610297441783663 0.929128633124781 0.0 0.8872041853254258 0.8488439118080969 0.6425368023180883 0.822454689781506 0.8232703646838466 0.8419672113919678 1.0 7.358938926615642 -9.814774291520346 0.6341195607408766 0.9914210414640307 0.7459541192333283 0.04414664918962474 0.26214467854011614 1.2259987240605172 1.0282660004531003 0.13648362632962424 0.06144577383159967 1.5318833945207216e-10 9.814774291520346 -0.24546692223070232 YRT(ph)IDEHDAII ddPTM_A549_PD325901_60min_R1 1 YRTIDEHDAII 11 1 E9PKT4;Q8N131-2;Q8N131 E9PKT4 TMEM123 Porimin 1 Y(0.041)RT(0.959)IDEHDAII 59.607 0.0036254 2786800.0 243.8 209.02 155.52 131.56 388.08 295.46 253.88 181.76 153.94 251.99 227.16 True False 268.5503965239258 226.6348489557538 166.07452241773208 139.68616240556162 360.8225996033191 293.0538717194507 263.5415423284667 178.13465421203836 147.47043714077023 236.07930839511764 199.22076008588326 1.3480040755198146 1.137606587074823 0.8336205641728203 0.7011626817674196 1.8111696765325558 1.4710006707790713 1.3228618453963081 0.8941570855128012 0.7402362940348001 1.1850135914216209 1.0 7.638224183126411 -8.27644316742869 20.285201710023664 0.8751679067280038 1.224262949227315 0.14599007695215405 0.30064655664208084 77.28801437646149 104493.28928242382 0.050574569047403484 0.061368349114944744 5.29123234714791e-09 8.27644316742869 0.3490950424993111 YRT(ph)ITTAYYR ddPTM_A549_PD325901_60min_R1 2 YRTITTAYYR 10 1 M0R257;P20337;O95716;P20336;Q96E17 M0R257 RAB3A;RAB3B;RAB3D;RAB3C Ras-related protein Rab-3B;Ras-related protein Rab-3D;Ras-related protein Rab-3A;Ras-related protein Rab-3C 1 YRT(1)ITTAYYR;YRT(1)ITTAYYR 95.18299999999999 0.00022279 19190800.0 3329.8 3159.3 2801.3999999999996 3469.2 3783.3 3196.0 3666.1000000000004 3813.2000000000003 3802.1000000000004 4087.0 4484.5 True False 3667.8388447308002 3425.545298564314 2991.519850186695 3683.4846048751447 3517.5740596764517 3169.9728356304227 3805.615441666896 3737.1427346024693 3642.310959158911 3828.9461225082164 3932.934929587709 0.9325958629870597 0.870989568831594 0.7606329379317488 0.936574001559005 0.8943890816025274 0.8060069369016314 0.9676273596689889 0.9502172808626242 0.9261050651404333 0.9735594895564688 1.0 11.941390601749493 -8.975224421826766 0.3259827550143946 1.005794142207765 0.8558460287523297 0.3686856908233084 0.055379818084695956 0.9544407460318219 0.2964483494400694 0.05109299450541071 0.038593715425653846 1.0587064968434356e-09 8.975224421826766 -0.14994811345543524 YRTEAHQDVVGR ddPTM_A549_MK2206_60min_R1 1 YRTEAHQDVVGR 12 1 Q9H0A0-2;Q9H0A0;A0A087WV29;E9PMU0 Q9H0A0-2 NAT10 N-acetyltransferase 10 0 56.951 0.054434 2060600.0 541.42 567.0 420.87 321.26 557.04 415.33 410.43 439.74 600.85 702.51 624.3 False True 632.7984595518834 595.8578781471897 480.55569457476065 399.96871442190934 475.1001539064262 459.27994492625896 484.9998183080282 502.0744916472697 464.75843436028686 543.8125030856153 469.26908019653973 1.348476782844619 1.269757380771032 1.0240514767635955 0.8523227531939545 1.0124258638720547 0.9787134169033742 1.0335217869135978 1.069907464256947 0.990387933007724 1.1588500628634113 1.0 8.874271595129875 -5.728277599133504 3.7323523829476337 0.9938022005030621 1.3293131119996833 0.7192636036055029 0.0712596971151792 0.05429377662973454 1.56150736411599 0.006893651919004389 0.029066096762469785 1.8694867905947275e-06 5.728277599133504 0.33551091149662116 YS(ph)DDGNR ddPTM_A549_MK2206_60min_R1 2 YSDDGNR 7 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 YS(1)DDGNR;YS(1)DDGNR 64.711 0.025571 5425800.0 2528.6 2277.33 1605.75 1213.19 957.41 850.25 801.9 1313.1100000000001 723.77 1808.1599999999999 2067.21 True False 2955.3658616654225 2393.236369737108 1833.469495481792 1510.4216044621683 816.5762572733577 940.2228906497279 947.594850038271 1499.2473637307196 559.8372506231914 1399.6954001783415 1553.8647049064361 1.9019454218463479 1.5401832361468133 1.1799415288168167 0.9720419028071793 0.5255130994963468 0.6050867155170644 0.6098309891756819 0.9648506456171773 0.36028699851117424 0.9007833151488065 1.0 10.601645178331855 -5.81945428345341 1.182449576629394 0.6891844914299285 1.9794969366732686 0.8049234902208964 0.19180812501164163 0.2765938903797055 0.5585301892006664 0.036432920119461074 0.342054730740928 1.515464322531668e-06 5.81945428345341 1.29031244524334 up YS(ph)DDGNR ddPTM_A549_PD325901_60min_R1 2 YSDDGNR 7 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 YS(1)DDGNR;YS(1)DDGNR 83.78299999999999 0.014353 7930400.0 2537.0 1977.54 2722.6000000000004 2594.1000000000004 2026.1 1379.76 1522.96 1163.0 1556.38 2394.9 2137.8 True False 2794.55437235931 2144.194235977233 2907.372008323801 2754.331665371444 1883.7937256655453 1368.5236920179698 1580.9170761956898 1139.8030526441496 1490.9707610572425 2243.6856052838093 1874.864152630751 1.4905369908737538 1.1436531190638886 1.550710756426948 1.4690833261208027 1.0047627840247864 0.7299321874055248 0.8432168666606571 0.6079390077648097 0.7952420227167706 1.1967190274215544 1.0 10.872570350443368 -6.874857694711674 4.307462394532242 0.8608576899084173 1.4031911138743038 0.6942682513161407 0.1711212575647541 0.08508057363633377 2.8031436158039087 0.022323295324993463 0.043521308169002994 1.3339584587747638e-07 6.874857694711674 0.5423334239658866 YS(ph)DDGNRETDEK ddPTM_A549_MK2206_60min_R1 3 YSDDGNRETDEK 12 1 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 Y(0.019)S(0.981)DDGNRETDEK;Y(0.003)S(0.997)DDGNRETDEK;YS(1)DDGNRETDEK 111.39 5.5669e-05 98948000.0 6677.6 5414.4 4183.8 4609.1 4275.700000000001 4836.700000000001 5239.8 5917.0 5001.5 5221.6 5371.5 True False 7804.615628354433 5689.969833227772 4777.125751329114 5738.32970691036 3646.7501939855406 5348.516383658381 6191.803834930209 6755.75287005252 3868.6682357543036 4042.036933441304 4037.6083041417787 1.9329798832512948 1.409242651742865 1.1831573029084417 1.4212200081478883 0.9031956344662517 1.3246744064231968 1.533532568916766 1.6732066018198122 0.9581583809865418 1.001096844707542 1.0 11.979285243602426 -2.0000000000000604 0.14020766595183323 0.8646266618535915 3.533147255793809 0.2946777813181498 0.26423288747975554 57.56775860303039 0.5140682139416047 0.6201831945459263 31.04390939043036 0.009999999999998609 2.0000000000000604 2.6685205939402175 YS(ph)DDGNRETDEK ddPTM_A549_PD325901_60min_R1 4 YSDDGNRETDEK 12 1 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 YS(1)DDGNRETDEK;Y(0.001)S(0.999)DDGNRETDEK;Y(0.001)S(0.933)DDGNRET(0.066)DEK;YS(1)DDGNRETDEK 123.84 6.200499999999999e-06 145371400.0 7996.4 8076.7 8962.2 9836.2 7734.699999999999 5500.77 5323.04 6103.43 6324.6 7326.5 7175.2 True False 8808.18864136145 8757.351854181119 9570.428786086675 10443.759734369001 7191.441355266424 5455.973552894481 5525.611200079257 5981.692300601791 6058.799056388955 6863.903539651689 6292.69588734033 1.399748025179764 1.391669327576944 1.520878961486205 1.6596638263386918 1.1428235980280237 0.8670327711006708 0.8780991961165171 0.9505770511865643 0.9628304251247976 1.0907731221304555 1.0 12.61946250686213 -6.941465580401569 4.997265163639818 0.9645808429557169 1.485108600684724 0.8910617919450083 0.0872559765361289 0.044162106358067714 2.271277453269609 0.01205237262920216 0.023024875603255487 1.1442855654936257e-07 6.941465580401569 0.5205277577290072 YS(ph)DRFSSR ddPTM_A549_MK2206_60min_R1 2 YSDRFSSR 8 1 Q13243-3;Q13243;B4DJK0;B4DUA4;G3V5K8;Q13243-2 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 1 Y(0.002)S(0.998)DRFSSR;Y(0.002)S(0.998)DRFSSR 76.22800000000001 0.0013084000000000001 48114000.0 5658.1 6309.6 5568.2 5121.0 7235.6 5800.9 5287.700000000001 5136.0 8509.3 9022.1 9318.0 True False 6613.048952736348 6630.731689519421 6357.854488395898 6375.645229890424 6171.25282494136 6414.747387674221 6248.406644902566 5864.043728340331 6581.957136559855 6984.001343879422 7004.083436282806 0.9441704989519675 0.9466951314672616 0.9077354012461802 0.9102754540105956 0.881093562217265 0.9158582198556222 0.8921091105988749 0.8372321348947958 0.939731400466157 0.9971328022308594 1.0 12.773980554669203 -9.650736343805583 1.139932443748378 0.9881080797063747 0.9063037213155376 0.5666871328112418 0.030226661842771656 0.2340117010959442 0.6253012637419592 0.009060218224628257 0.006298832004656632 2.2349286157145614e-10 9.650736343805583 -0.0818043583908371 YS(ph)DTTDSDPENEPFDEDQHTQITK ddPTM_A549_MK2206_60min_R1 1 YSDTTDSDPENEPFDEDQHTQITK 24 0 P60484-2;P60484 P60484-2 PTEN Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 1 Y(0.124)S(0.232)DT(0.219)T(0.219)DS(0.206)DPENEPFDEDQHT(0.001)QITK 45.332 0.008295299999999999 2908600.0 814.59 811.93 652.68 778.31 1263.0 914.91 1086.9 1150.3 1491.0 1453.8 1565.1 True False 952.0728771865996 853.2537689665752 745.2398382756068 968.9959849396632 1077.2143730859837 1011.7251689318936 1284.375660938517 1313.358547646006 1153.290880637743 1125.3855702920494 1176.4424754374563 0.8092812840955733 0.7252830348966238 0.6334689998323052 0.8236662694275343 0.9156540974818382 0.859986943735338 1.0917454000128022 1.1163814424140355 0.9803206741654712 0.9566005935594755 1.0 10.200215063422283 -6.9267154811398 1.3502653680984014 1.0048096165370022 0.7238088228064078 0.7395901164944123 0.07228189740479966 0.16069003833618536 0.5825935726665601 0.011322407401658187 0.027555006704504132 1.1838168543543974e-07 6.9267154811398 -0.2810007937305944 YS(ph)FRVPEEER ddPTM_A549_PD325901_60min_R1 2 YSFRVPEEER 10 1 A0A0A0MRJ1;H0Y5V1;Q5VT25-2;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-6;H0Y7V8;H0Y6R0 A0A0A0MRJ1 CDC42BPA Serine/threonine-protein kinase MRCK alpha;Non-specific serine/threonine protein kinase 1 YS(1)FRVPEEER;YS(1)FRVPEEER 88.087 2.4983e-05 3541800.0 660.97 545.69 780.57 604.74 855.2 812.11 655.46 460.44 749.94 883.34 917.23 True False 728.0711878196032 591.6772113992213 833.5441741487213 642.0934163358112 795.1337022798355 805.4964454142126 680.4038889814744 451.2561629918075 718.4226297866004 827.5657616482525 804.4165248000295 0.905092281639285 0.735535873714562 1.036209660605782 0.7982101268934395 0.9884601792305278 1.0013424893458667 0.845835295527546 0.560973263327709 0.8930978014967975 1.0287776744193287 1.0 9.651798908417222 -9.989640666920593 1.2848572351250225 0.9823541884812731 0.86438948104816 0.16045451363270768 0.12885855760109477 0.6088087568254162 2.016675971368275 0.039123996807043246 0.023521408466909158 1.0241400101388253e-10 9.989640666920593 -0.11796470743311305 YS(ph)GAYGASVSDEELK ddPTM_A549_MK2206_60min_R1 2 YSGAYGASVSDEELK 15 0 C9JRZ6;Q9NX63;F8WAR4;A0A286YEX5 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 YS(1)GAYGASVSDEELK;YS(0.986)GAYGAS(0.014)VSDEELK 216.99 8.7774e-46 151879000.0 15178.5 16461.2 14906.1 14579.5 20772.5 17097.8 16449.2 17847.7 21288.5 20460.7 19596.4 True False 17740.259721303722 17299.004768530023 17020.009121345865 18151.47815449862 17716.892767164358 18907.07784739891 19437.806718106414 20377.666131288886 16466.688740748876 15838.6136594267 14730.073046874048 1.204356534068138 1.174400474015378 1.1554599265858887 1.2322734650898863 1.2027701906694999 1.2835698633151915 1.319600157871004 1.383405640042861 1.1178959322434159 1.0752569664132048 1.0 13.84647696430893 -9.111103822242919 2.6287513732636025 1.0436101502875927 1.2409689248577151 0.5807054375678901 0.06782880598024447 0.13249332633708955 1.8990997337130662 0.014820452826118942 0.014364964263585453 7.742766774427982e-10 9.111103822242919 0.1973587745701224 YS(ph)GAYGASVSDEELK ddPTM_A549_PD325901_60min_R1 2 YSGAYGASVSDEELK 15 0 C9JRZ6;Q9NX63;F8WAR4;A0A286YEX5 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 YS(1)GAYGASVSDEELK;YS(1)GAYGASVSDEELK 283.05 2.2731999999999993e-106 225930000.0 28274.0 32320.0 31193.0 29991.0 35647.0 29599.0 30106.0 30395.0 31589.0 33376.0 31645.0 True False 31144.355665781306 35043.71982704987 33309.94455874691 31843.47595549711 33143.277695473924 29357.955557517158 31251.700304635346 29788.747880583785 30261.42418370657 31268.633664016208 27752.86561418284 1.1222032383519083 1.2627063566776726 1.2002344198187656 1.1473941609555376 1.194229026877007 1.0578351066750402 1.1260711142082733 1.0733575514220242 1.0903891729379382 1.126681262349956 1.0 14.760349123766252 -7.8488787462215335 0.18752245794889114 0.9633744362734766 1.2770421376259256 0.35109373577378056 0.05637169292782253 1.5800340883672046 0.17889777119932226 0.09429084761875185 0.16399153959625584 1.4161891207216297e-08 7.8488787462215335 0.3136677013524489 YS(ph)GAYGASVSDEELKR ddPTM_A549_MK2206_60min_R1 1 YSGAYGASVSDEELKR 16 1 C9JRZ6;Q9NX63;F8WAR4;A0A286YEX5 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 Y(0.004)S(0.996)GAYGASVSDEELKR 101.28 5.1532e-07 44082000.0 6169.3 7021.4 6022.6 5772.2 8405.3 7335.3 5991.0 6822.3 10249.0 9053.8 8216.6 True False 7210.5270150963 7378.759269175798 6876.695241157494 7186.389259123901 7168.891504433584 8111.516577221932 7079.487151239907 7789.381917417496 7927.617864289888 7008.540291862809 6176.191453376403 1.1674714214298596 1.1947102554830897 1.1134200247950765 1.1635632271721827 1.1607301293282433 1.3133525148070861 1.146254484609555 1.2611950222429056 1.2835770918267138 1.1347673310922668 1.0 12.592501759508302 -10.922573735965164 1.1827021024125937 1.0001998928678235 1.2060887658363446 0.29024430587416883 0.07001940287700946 0.26526875704948516 0.6602716561314309 0.04419849487803639 0.01048221071714067 1.1951605900967699e-11 10.922573735965164 0.2058888729685211 YS(ph)GAYGASVSDEELKR ddPTM_A549_PD325901_60min_R1 2 YSGAYGASVSDEELKR 16 1 C9JRZ6;Q9NX63;F8WAR4;A0A286YEX5 C9JRZ6 CHCHD3 MICOS complex subunit MIC19 1 YS(1)GAYGASVSDEELKR;YS(1)GAYGASVSDEELKR 287.38 3.145399999999999e-108 137722000.0 28060.0 30795.0 31240.0 29507.0 32305.0 31563.0 32665.0 29440.0 30556.0 34374.0 32670.0 True False 30908.630543319796 33390.20272506189 33360.13426138085 31329.58037474085 30036.008246199835 31305.961392679314 33908.084449973874 28852.796104766796 29271.83758135232 32203.619773696457 28651.797112193184 1.0787676047784864 1.165379002033077 1.1643295577848403 1.0934595220000387 1.0483114943396545 1.092635176428658 1.1834540192085823 1.0070152316026304 1.0216405437582576 1.123965091878713 1.0 14.8063380108017 -8.285787640870248 24.25762782499257 1.010264378172348 1.1170432252497327 0.3079988715066452 0.051783590520492806 257.5317871279225 256572.50732139137 0.0065420330567993335 0.007911025001479477 5.1785999062297746e-09 8.285787640870248 0.10677884707738472 YS(ph)GGNYR ddPTM_A549_MK2206_60min_R1 2 YSGGNYR 7 0 P98179 P98179 RBM3 RNA-binding protein 3 1 Y(0.095)S(0.902)GGNY(0.003)R;Y(0.017)S(0.981)GGNY(0.001)R 49.443999999999996 0.054603 10487200.0 4194.7 4648.2 3582.1000000000004 3697.4 5784.6 4557.3 4189.6 5745.9 5440.4 5837.3 5782.2 True False 4902.662809431286 4884.773525932574 4090.095643634022 4603.263165982591 4933.693002813287 5039.550461109095 4950.7960889392 6560.398921080748 4208.158086533585 4518.649875819085 4346.320159398416 1.1280031451042196 1.1238871842815845 0.9410479425427651 1.0591173676031587 1.1351425624144935 1.1594982137272258 1.139077635188396 1.5094145577137574 0.9682117129438633 1.0396495679334679 1.0 12.085578735150904 YS(ph)GGNYRDNYDN ddPTM_A549_MK2206_60min_R1 2 YSGGNYRDNYDN 12 1 P98179 P98179 RBM3 RNA-binding protein 3 1 YS(1)GGNYRDNYDN;Y(0.001)S(0.994)GGNY(0.001)RDNY(0.005)DN 78.505 0.00081574 12252400.0 3826.7 4228.2 3828.8 4019.1 5614.3 4570.799999999999 3765.1000000000004 4283.7 6388.0 6420.200000000001 6788.2 True False 4472.553406167474 4443.397319897618 4371.781413234116 5003.779680424254 4788.443907218236 5054.479022148516 4449.169933756202 4890.92759328105 4941.1281995398385 4969.872360977451 5102.502595210877 0.8765411330442707 0.8708270573087246 0.8567916099322315 0.9806520598579838 0.9384500679553968 0.9905882315263426 0.8719583872298503 0.9585350525586389 0.9683734809223807 0.9740068266975678 1.0 12.316989295697036 -2.000000000014104 0.15457053335988857 1.0108306975597448 0.44474696230079985 0.4832001367927854 0.03768410414455294 32.46799073824426 0.3101040490599897 0.05946290476286278 4.187675922422541 0.009999999999675248 2.000000000014104 -0.566083735258945 YS(ph)GKTEYQTTK ddPTM_A549_PD325901_60min_R1 1 YSGKTEYQTTK 11 1 Q9HCM4-4;Q9HCM4-3;Q9HCM4;Q9HCM4-2 Q9HCM4-4 EPB41L5 Band 4.1-like protein 5 1 Y(0.094)S(0.896)GKT(0.007)EY(0.002)QTTK 50.843 0.0071743 3573200.0 1751.7 1977.4 1879.2 1627.2 2168.1 1957.7 1799.7 1906.8 1983.6 2060.1 2047.2 True False 1929.5312944666166 2144.0424376859046 2006.7338125475976 1727.7084483606714 2015.8201355389517 1941.757140273367 1868.1885683336284 1868.7673781443368 1900.2361901548131 1930.0249344211352 1795.4073782700304 1.074703890504127 1.194181590003157 1.1177038909582688 0.962293276317829 1.122764760764936 1.0815134012339596 1.040537423954293 1.0408598075078608 1.0583872012299465 1.0749788364358934 1.0 10.810095513628358 -2.0000000001192535 0.09974482321926895 0.9668673622195925 1.4306942505781135 0.16043774994537063 0.054567395439658585 93.48456765156868 0.6404289091672514 0.3313109619137782 5.959341791622514 0.009999999997254087 2.0000000001192535 0.46382688835852104 YS(ph)LSPSK ddPTM_A549_MK2206_60min_R1 1 YSLSPSK 7 0 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37;F8W705;Q99666-2 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 Y(0.002)S(0.85)LS(0.144)PS(0.004)K 100.98 0.011073000000000001 282940000.0 6374.2 7185.0 7354.7 7204.2 8494.3 6552.5 6697.0 6886.1 9896.7 9967.1 9109.9 True False 7450.00912577226 7550.685810383708 8397.70705179507 8969.229323408825 7244.799722331164 7245.881200802524 7913.7582126278885 7862.225762796799 7655.11325178239 7715.5251875484155 6847.6604095506245 1.087964162968935 1.1026665107183986 1.2263614942240058 1.3098239087468748 1.0579963504362218 1.058154284446771 1.155687890361845 1.1481623346612124 1.1179166012826203 1.1267388751912049 1.0 12.741395441774207 -10.671562323199634 0.3554240502459479 0.9483852128468933 1.1568573795955284 0.036317886822026746 0.07963831753546138 2.3775082975959894 0.3885916900214899 0.19223628350411218 0.028067522186303064 2.1302848402087823e-11 10.671562323199634 0.2084721667486351 YS(ph)LSPSK ddPTM_A549_PD325901_60min_R1 2 YSLSPSK 7 0 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37;F8W705;Q99666-2 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YS(0.872)LS(0.128)PSK;YS(0.871)LS(0.128)PSK 123.21 0.0062835 435101000.0 18848.3 17561.5 18760.4 18238.2 20267.9 18617.0 19284.3 19582.2 19891.4 17938.4 20144.5 True False 20761.76554061489 19041.46923708962 20033.59355944973 19364.732192042513 18844.352624459163 18465.38932444667 20018.174589273873 19191.61765906129 19055.433632206816 16805.766362613496 17666.854206506774 1.1751818007853514 1.0778075719941453 1.1339649563684788 1.0961052808660414 1.0666501463242228 1.0451996212005754 1.1330921937365113 1.0863064490560486 1.078598001062839 0.9512596960484263 1.0 14.108757553298162 -14.999999999990777 0.11971184948737909 0.6666634721719982 1.147802541537556 0.6598762416398474 0.03487839500025224 39.75471161424849 0.33163736899959506 3.188978624173072 0.11839045669008562 1.0000000000212364e-15 14.999999999990777 0.4811390693655577 YS(ph)PGKLR ddPTM_A549_MK2206_60min_R1 1 YSPGKLR 7 1 P84157-2;P84157-3;P84157;Q6ZR64 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 Y(0.017)S(0.983)PGKLR 60.828 0.0079441 49850000.0 2662.9 2598.1 2154.0 2455.2 2634.4 2165.1 2273.4 2266.3 2754.4 2735.2 2815.2 True False 3112.332418345666 2730.332192617662 2459.469589455257 3056.7241102181147 2246.8832497685794 2394.2094449229344 2686.447352633752 2587.554965252666 2130.5327978729692 2117.3164203210977 2116.1081444326405 1.470781361781549 1.2902611805549775 1.1622608210860965 1.444502786050978 1.0617998213749145 1.1314211191058277 1.2695227130530362 1.2227895686996788 1.0068165955876496 1.0005709896687633 1.0 11.047197643423047 -3.3170460070970473 0.15099126285095954 0.915504402258093 2.2499845871255775 0.5624596375731507 0.10687446121750441 20.80873387111061 0.28085458472331853 0.2094998115667255 5.731462026202213 0.0004818967450660684 3.3170460070970473 1.3344801848674845 YS(ph)PGKLR ddPTM_A549_PD325901_60min_R1 2 YSPGKLR 7 1 P84157-2;P84157-3;P84157;Q6ZR64 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 Y(0.233)S(0.767)PGKLR;Y(0.014)S(0.986)PGKLR 92.838 0.0034089 108136000.0 5792.1 5423.5 6012.4 5782.5 6397.5 5352.4 5838.5 6142.0 5498.200000000001 6054.200000000001 6450.0 True False 6380.109728081342 5880.557378774907 6420.437619498279 6139.671891989662 5948.161670176857 5308.811828982566 6060.687312449792 6019.492991694212 5267.129774505543 5671.936778783766 5656.690889918769 1.1278872846758932 1.039575520956096 1.1350165219281545 1.085382251119935 1.0515267293069772 0.9385013132755432 1.0714192149426118 1.064136808751919 0.9311326846394429 1.0026951956827213 1.0 12.465742621674254 -7.203124613458706 0.6385101764052526 0.9725037837016046 1.1081998073470676 0.38687013635392853 0.05044600806007236 0.5421104931683445 0.41525402121198796 0.010959574827729954 0.033931440696693765 6.264340942106833e-08 7.203124613458706 0.13569602364546296 YS(ph)PPAISPLVSEK ddPTM_A549_MK2206_60min_R1 2 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 YS(1)PPAISPLVSEK;Y(0.102)S(0.898)PPAISPLVSEK 142.85 2.3729e-12 10737400.0 3478.6 3874.1000000000004 3684.5 3541.3 5024.1 4170.5 3676.6 4421.2 5451.7 4510.8 4546.5 True False 4065.7026363953705 4071.2751423810028 4207.017503411278 4408.918658974996 4285.061545385027 4611.819541846151 4344.590629318755 5047.9186393571445 4216.898654575976 3491.807147113342 3417.4785729834507 1.189679042477806 1.191309632360559 1.231029665165848 1.290108647301926 1.2538663970741968 1.3494801630372897 1.2712854042932413 1.477088599549089 1.233921022332741 1.0217495362567857 1.0 11.738716577066231 -10.179556302845816 0.8984850964369102 1.0172053229159133 1.2772621763028569 0.6258040560904014 0.07837790903042086 0.26624804906727245 0.4245400965673981 0.037649436230100045 0.016081651784345345 6.613687906914035e-11 10.179556302845816 0.2600568533869436 YS(ph)PPAISPLVSEK ddPTM_A549_PD325901_60min_R1 2 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 YS(1)PPAISPLVSEK;YS(1)PPAISPLVSEK 150.12 8.262299999999999e-13 14086600.0 5758.3 6768.5 6279.6 6057.799999999999 6840.0 6264.6 6528.4 6375.5 6087.799999999999 7040.1 6171.5 True False 6342.8783769635875 7338.905249052819 6705.771418302407 6431.976547737999 6359.581996718988 6213.583174621507 6776.841834477554 6248.335651017009 5831.950936894765 6595.586884529014 5412.444624361813 1.1719063782036352 1.3559317015494006 1.238954277355418 1.1883681024258792 1.1749925289016427 1.1480178747055831 1.2520852045256017 1.1544387212559715 1.0775077329465363 1.2185966494404008 1.0 12.402064644119504 -8.658044474908596 0.3766966431441738 0.9885944064228691 1.2637315319133995 0.08827697666151613 0.08435637475034148 0.3858363070704134 0.1491497637227355 0.03244708442340738 0.03281274113593174 2.1976348074983474e-09 8.658044474908596 0.2751371254905304 YS(ph)PPRDDDKVDNQAK ddPTM_A549_MK2206_60min_R1 4 YSPPRDDDKVDNQAK 15 2 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 YS(1)PPRDDDKVDNQAK;Y(0.003)S(0.997)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK;Y(0.002)S(0.998)PPRDDDKVDNQAK 180.8 5.407999999999999e-30 1023055000.0 36013.2 42077.899999999994 39128.200000000004 35445.8 49968.600000000006 40908.200000000004 36583.7 38480.299999999996 56792.5 55457.5 57874.9 True False 42091.34772179434 44219.48538075777 44677.1671263339 44130.022591222405 42618.285133004145 45237.07857133454 43230.48474291699 43935.00036597634 43929.08942898657 42929.61223309351 43502.965064018405 0.9675512384007217 1.0164706087432187 1.0269913110655229 1.0144141330661307 0.9796639164775923 1.0398619612425093 0.9937365115067344 1.0099311690897885 1.0097952947423487 0.9868203735060092 1.0 15.408826114703306 YS(ph)PPRDDDKVDNQAK ddPTM_A549_PD325901_60min_R1 6 YSPPRDDDKVDNQAK 15 2 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 Y(0.001)S(0.999)PPRDDDKVDNQAK;Y(0.001)S(0.999)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK 196.62 6.589599999999999e-39 1781800000.0 73620.6 73155.2 80990.9 80094.6 94584.0 84039.9 82673.0 87707.2 90983.5 88127.6 95550.0 True False 81094.50911537881 79320.24544219667 86487.42951184597 85041.86153396548 87940.74613708611 83355.50691774007 85819.16625540146 85957.81109103262 87159.77989864396 82563.20829604978 83797.95574135467 0.9677385134033563 0.9465653993639342 1.032094742010085 1.0148441066563743 1.0494378455784568 0.9947200523007956 1.0241200456045172 1.025774558944426 1.0401182120440464 0.9852651841637284 1.0 16.354627429228454 -5.761107870178144 24.99995227749203 1.0208999761061757 0.9571519406610746 0.6043270108324288 0.019059873446907103 3.6486700745698792 275027.516495695 0.002464865157414544 0.008498490268562985 1.7333734085362982e-06 5.761107870178144 -0.0637480354451011 YS(ph)PRHS(ph)R ddPTM_A549_MK2206_60min_R1 1 YSPRHSR 7 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 Y(0.011)S(0.99)PRHS(1)R 47.302 0.017406 207500000.0 2215.7 1665.7 1336.8 725.91 4049.8 1931.6 1518.2 2341.0 3526.1 2068.1 2130.7 True False 2589.655991335947 1750.4770152200604 1526.378341310951 903.7579825873379 3454.079784737621 2136.0006299076913 1794.0372881008911 2672.8439190118215 2727.4439800246423 1600.91477364217 1601.5883856715798 1.6169298020040583 1.0929631051776443 0.9530403410554882 0.5642885467156863 2.1566588616895173 1.3336763983912265 1.1201612749886505 1.6688706929471406 1.7029618873522034 0.9995794100185565 1.0 10.645287701913935 -6.72412447671382 24.99991612604878 1.3964269271952083 1.0519772644890764 0.1661846564606535 0.39422278936741084 274.2819423863354 183759.7721252843 0.05875661693736224 0.12230925894815635 1.8874502939075833e-07 6.72412447671382 -0.344449662706132 YS(ph)PRHS(ph)R ddPTM_A549_PD325901_60min_R1 1 YSPRHSR 7 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 Y(0.026)S(0.974)PRHS(1)R 40.589 0.033349000000000004 34810000.0 1689.6 1822.3 1739.3 1709.9 1888.6 1656.1 1315.6 1667.9 1852.3 2165.2 1985.1 True False 1861.1269481822198 1975.8716163624063 1857.339357260554 1815.5166395353433 1755.9512513162965 1642.6132706782053 1365.6658779239428 1634.6324260577626 1774.454272546763 2028.4889024846568 1740.9452845856963 1.069032418572031 1.1349418237647928 1.0668568241089533 1.0428338303391271 1.0086194361554397 0.9435180331179152 0.7844392871019717 0.9389338312529255 1.0192475824816292 1.1651652239992074 1.0 10.765655146526855 -6.512736872149965 1.8436715009896347 0.9810995980581284 1.0979362203369332 0.2504850853629593 0.08564476912894137 0.3392351268469032 2.269225962603471 0.011099662281772255 0.03100547069659982 3.0708819932404093e-07 6.512736872149965 0.11683662227880476 YS(ph)PRHS(ph)RS(ph)R ddPTM_A549_PD325901_60min_R1 1 YSPRHSRSR 9 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 3 Y(0.067)S(0.933)PRHS(1)RS(1)R 53.448 0.0064324 52744000.0 741.6 802.73 600.52 709.49 839.13 539.55 773.79 480.17 803.98 967.88 716.62 True False 816.886686062935 870.3788742811801 641.2748984201165 753.3135859313003 780.1924036413454 535.1560836872324 803.2370018841349 470.59263266392196 770.1915165157618 906.7678916205656 628.4802830284635 1.2997809288886453 1.3848944792461548 1.0203580219414354 1.1986272382345893 1.2413951952188944 0.851508150913615 1.278062372957143 0.7487786735269929 1.2254823855482515 1.4427944934900983 1.0 9.295723674240307 -5.757712936179377 24.999239143718043 1.0898873891297414 1.342337778682856 0.17006169038858265 0.19136693279562283 87.37515287848242 586138.7224040917 0.020846634395264647 0.07494873423589418 1.746976503404133e-06 5.757712936179377 0.2524503895531147 YS(ph)PSQNS(ph)PIHHIPSR ddPTM_A549_MK2206_60min_R1 4 YSPSQNSPIHHIPSR 15 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.003)S(0.547)PS(0.45)QNS(0.915)PIHHIPS(0.085)R;Y(0.001)S(0.966)PS(0.033)QNS(0.999)PIHHIPSR;Y(0.004)S(0.898)PS(0.104)QNS(0.994)PIHHIPSR;Y(0.001)S(0.811)PS(0.188)QNS(0.999)PIHHIPS(0.001)R 98.56200000000001 4.1231e-06 161884000.0 6064.7 5469.55 5885.43 4527.46 7539.78 6042.0199999999995 5758.570000000001 6498.51 8700.25 8675.24 7963.85 True False 7088.273092320764 5747.926732663074 6720.072472547659 5636.687903245406 6430.688349886169 6681.382546031724 6804.827628862562 7419.693693352208 6729.657266444344 6715.497258784155 5986.20625392153 1.1841010469155278 0.9601952369913147 1.1225928722628589 0.9416127116490254 1.0742510493475665 1.116129692600349 1.136751281231708 1.239465093353843 1.1241940188806196 1.121828579559027 1.0 12.547426272215688 -6.983670913513033 24.98255220676 1.0855825644627841 1.0452598610324724 0.04547485568135212 0.08559746281085333 755.4870960667071 1155845.596807022 0.013446400146194255 0.02540656886803031 1.0383149005423794e-07 6.983670913513033 -0.040322703430311746 YS(ph)PSQNS(ph)PIHHIPSR ddPTM_A549_PD325901_60min_R1 4 YSPSQNSPIHHIPSR 15 0 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.001)S(0.843)PS(0.156)QNS(0.589)PIHHIPS(0.411)R;Y(0.001)S(0.812)PS(0.188)QNS(0.999)PIHHIPSR;Y(0.001)S(0.972)PS(0.028)QNS(0.987)PIHHIPS(0.012)R;Y(0.006)S(0.958)PS(0.036)QNS(0.998)PIHHIPS(0.002)R 138.02 2.3443000000000004e-10 217849000.0 9876.7 11173.199999999999 10466.2 11374.060000000001 13709.5 9707.38 9630.1 10815.7 13553.1 12453.4 11131.0 True False 10879.375313157747 12114.804776348816 11176.499270373375 12076.609853835533 12746.592015207445 9628.326315751581 9996.578725292924 10599.972378747485 12983.510339174827 11667.090198689466 9761.957565222603 1.1144665647713932 1.2410220691296932 1.144903488434547 1.237109439694655 1.3057413874259944 0.9863110192214839 1.0240342327348533 1.0858449555763636 1.330010938116464 1.1951588726685292 1.0 13.252954765078792 -7.235407356281205 24.98252846803695 1.1320551178097122 1.2084868598024219 0.17397506923792827 0.10439056682678023 1817.9504358647428 1744659.1737029464 0.020481272454428292 0.035466063910883264 5.815574769450234e-08 7.235407356281205 0.07643174199270963 YS(ph)PSQNS(ph)PIHHIPSRR ddPTM_A549_MK2206_60min_R1 1 YSPSQNSPIHHIPSRR 16 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 YS(0.749)PS(0.251)QNS(1)PIHHIPSRR 88.176 4.48e-06 6843900.0 924.27 935.83 581.7 683.12 1148.6 679.67 491.66 571.43 1215.8 1044.3 1331.1 True False 1080.2641797680535 983.459749746887 664.1938069573463 850.4844306664226 979.6424615412191 751.5922282715684 580.9882578498773 652.4319524309807 940.4232412336465 808.3919047021508 1000.5511335089125 1.0796691379276029 0.982918030683663 0.6638279491304279 0.8500159583886442 0.9791028451545828 0.751178228778523 0.5806682321295897 0.6520725733855451 0.9399052279673117 0.8079466182474221 1.0 9.966579183214764 -8.97049045345292 19.54297535229806 0.9734891368889511 0.8130634383865503 0.044400886681269736 0.1546249150592855 20.821518461841922 13789.835214379125 0.026945311299704674 0.02827080067083842 1.070309909923747e-09 8.97049045345292 -0.16042569850240085 YS(ph)PVSK ddPTM_A549_MK2206_60min_R1 2 YSPVSK 6 0 A0A590UK02;A0A590UJD9;A0A0C4DFT3;A0A590UK70;Q12959-9;A0A590UJ81;A0A590UJX2;A0A590UJS9;A0A590UJ68;Q12959-8;Q12959-5;Q12959-3;Q12959-6;A0A590UJ18;Q12959;A0A590UJR5;A0A590UJR4;Q12959-7;A0A590UJ29;E7EQD7;A0A590UKA8;A0A590UK81;A0A590UJ64;A0A590UK48;H7C166;A0A590UJ25;A0A590UJL2;A0A590UJ08;A0A590UJC5;Q12959-4;Q12959-2 A0A590UK02;A0A590UJ25 DLG1 Disks large homolog 1 1 Y(0.031)S(0.968)PVS(0.001)K;Y(0.15)S(0.843)PVS(0.007)K 82.75 0.041497000000000006 84201000.0 27493.0 29117.0 26720.0 25185.0 36798.0 29271.0 28068.0 32035.0 38302.0 36847.0 37131.0 True False 32133.146260684753 30598.93093123762 30509.297785628838 31355.326130597627 31385.062946015856 32368.437791482742 33167.5922819232 36576.059353072924 29626.65815572557 28523.237108647103 27910.347936533235 1.1512986629100417 1.0963292539676714 1.0931177875319036 1.1234301414621597 1.1244955819749705 1.1597289243791222 1.188361834734009 1.3104838189851697 1.0614936876851246 1.0219592093050058 1.0 14.768512489019077 -8.977982681494282 19.319490140872375 1.0271278076529289 1.1530994733734263 0.5108679343622824 0.0566826927710912 7.7965412987321985 6841.83771226518 0.010881764275929438 0.011201923561013658 1.0520038240936992e-09 8.977982681494282 0.12597166572049745 YS(ph)PVSK ddPTM_A549_PD325901_60min_R1 2 YSPVSK 6 0 A0A590UK02;A0A590UJD9;A0A0C4DFT3;A0A590UK70;Q12959-9;A0A590UJ81;A0A590UJX2;A0A590UJS9;A0A590UJ68;Q12959-8;Q12959-5;Q12959-3;Q12959-6;A0A590UJ18;Q12959;A0A590UJR5;A0A590UJR4;Q12959-7;A0A590UJ29;E7EQD7;A0A590UKA8;A0A590UK81;A0A590UJ64;A0A590UK48;H7C166;A0A590UJ25;A0A590UJL2;A0A590UJ08;A0A590UJC5;Q12959-4;Q12959-2 A0A590UK02;A0A590UJ25 DLG1 Disks large homolog 1 1 Y(0.002)S(0.997)PVSK;Y(0.435)S(0.565)PVSK 105.14 0.028794999999999998 146177000.0 26184.0 24027.0 25220.0 24777.0 27779.0 24764.0 23779.0 24104.0 26474.0 24531.0 26852.0 True False 28842.180404357972 26051.83961276382 26931.580860180085 26307.41901735024 25827.89887234746 24562.33019447803 24683.922857368092 23623.226810777793 25361.389845814927 22982.10847351334 23549.374228852517 1.2247535804590828 1.1062646234075002 1.1436219323052632 1.1171175404363223 1.0967552097712776 1.0430141351435336 1.048177442741792 1.0031360740717599 1.0769453828943931 0.9759116420747959 1.0 14.52340110355201 -2.0000000000000084 0.23201576086373107 1.018458583566411 2.0510370915085794 0.7912784243231322 0.031623323513373665 16.796473764551575 0.1990943298881749 0.017828611119530775 6.705494307781669 0.009999999999999806 2.0000000000000084 1.0325785079421683 YS(ph)RLSSTDDGYIDLQFKK ddPTM_A549_MK2206_60min_R1 2 YSRLSSTDDGYIDLQFKK 18 2 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 Y(0.005)S(0.443)RLS(0.368)S(0.092)T(0.092)DDGY(0.001)IDLQFKK;YS(0.567)RLS(0.396)S(0.024)T(0.013)DDGYIDLQFKK 92.792 9.092e-07 8647500.0 5515.5 6018.9 5026.7 4681.7 6627.700000000001 4078.3 4383.5 3649.5 6902.1 5911.4 6556.9 True False 6446.381558971617 6325.2363011995085 5739.561645921422 5828.716710169501 5652.774109661098 4509.86299904356 5179.925209056942 4166.827801125009 5338.7853703888395 4576.010634354395 4928.640768766123 1.3079430742495477 1.2833632228349685 1.1645323559173315 1.1826215347459195 1.1469235383280452 0.9150317928674272 1.0509845314520108 0.8454314275714939 1.0832165744807154 0.9284528633844806 1.0 12.266974116552484 -6.526583813891406 1.1042375014446213 1.018284059671252 1.286612076162085 0.6947869022415993 0.07951184241302027 0.25428541432703744 0.5752793743066665 0.012097495296968375 0.04637800372734966 2.974515155918987e-07 6.526583813891406 0.26832801649083304 YS(ph)RLSSTDDGYIDLQFKK ddPTM_A549_PD325901_60min_R1 1 YSRLSSTDDGYIDLQFKK 18 2 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 Y(0.004)S(0.427)RLS(0.391)S(0.082)T(0.096)DDGYIDLQFKK 45.395 0.0076544 3059400.0 2093.3 2281.8 1966.6 2395.4 3123.3 2763.3 2606.4 2758.9 3822.1 4791.5 5565.7 True False 2305.810274993987 2474.0952939777953 2100.065302126491 2543.3584176518875 2903.930182800058 2740.796600969196 2705.5879782768075 2703.871575184821 3661.470428710783 4488.963872277495 4881.154183879208 0.47239037902332487 0.5068668599219608 0.43023949316378746 0.5210567668711911 0.594926952398011 0.56150584425731 0.554292668568521 0.5539410297906157 0.7501239032365284 0.9196521361900462 1.0 12.253006608367604 -9.360191226777099 0.429768786124278 1.021656352801877 0.47457859713753076 0.9254125817263816 0.04830054118674039 0.15965424345605905 0.07058602933515207 0.03361762170511878 0.01871255188156993 4.363236696763592e-10 9.360191226777099 -0.5470777556643462 down YS(ph)SDSESPR ddPTM_A549_MK2206_60min_R1 1 YSSDSESPR 9 0 Q9NPE2 Q9NPE2 NGRN Neugrin 1 YS(0.5)S(0.5)DSESPR 96.89 0.00087847 3204500.0 499.38 260.14 301.63 363.08 391.28 371.78 238.41 325.53 585.15 582.75 558.13 True False 583.6631353312024 273.3800148522223 344.40566957631813 452.0346162992805 333.7232303254816 411.12151283240934 281.7260109709741 371.6748743938138 452.61445929253847 451.1063702625479 419.5309173956346 1.3912279432335244 0.6516325818113994 0.8209303660247992 1.077476289722394 0.7954675483684724 0.9799552209037913 0.6715262196165988 0.8859296394675709 1.0788584119193885 1.0752637089607782 1.0 8.712633323991088 -8.753014200863197 24.611477508728758 1.037238694716041 0.8939808366135725 0.09084961647283807 0.19451723298934098 247.10434656581535 721835.4470937138 0.030144487275683696 0.03390274083914355 1.7659800744966283e-09 8.753014200863197 -0.1432578581024685 YS(ph)SGGNFETPSK ddPTM_A549_MK2206_60min_R1 2 YSSGGNFETPSK 12 0 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 Y(0.001)S(0.746)S(0.252)GGNFET(0.001)PSK;YS(0.74)S(0.26)GGNFETPSK 100.4 0.00024364 15002500.0 8626.8 10143.8 9927.4 7691.0 12395.4 9405.0 8958.900000000001 7669.700000000001 14114.8 13312.800000000001 13996.3 True False 10082.792934989822 10660.076092327094 11335.25459719505 9575.295345262108 10572.053080087084 10400.230857466264 10586.61616412006 8756.903462471158 10917.820336703966 10305.429233858853 10520.632431771304 0.9583827778775686 1.0132543040031208 1.0774309121344896 0.9101444620710853 1.0048876004982832 0.9885556714307935 1.0062718408590619 0.8323552333247711 1.0377532346566156 0.9795446519676366 1.0 13.360933812198263 YS(ph)SLVIFPR ddPTM_A549_MK2206_60min_R1 1 YSSLVIFPR 9 0 P46934-3;P46934-2;P46934;H0YA37 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 Y(0.035)S(0.482)S(0.482)LVIFPR 45.161 0.04989 976500.0 258.85 311.08 299.59 283.09 634.65 374.18 383.12 351.85 514.0 413.55 416.24 True False 302.5375517251027 326.91264326989017 342.0763669010681 352.4470627083931 541.2938257157715 413.77547923941796 452.72794481439416 401.7258149954333 397.579820689336 320.12876777705105 312.87612036041577 0.9669563512120911 1.044862877017604 1.0933284601810305 1.126474792331207 1.7300579702031313 1.3224898044720441 1.4469878503123759 1.283977232051675 1.2707259992592157 1.023180571940999 1.0 8.289447741762713 -4.102488250406181 12.298326623823781 1.190686069778839 1.1860191537031515 0.0 0.2212433372903664 0.0 0.0 0.03088639355625161 0.0 7.89790216442536e-05 4.102488250406181 -0.004666916075687588 YSCPES(ph)PSQELGGPLPSPGPR ddPTM_A549_MK2206_60min_R1 2 YSCPESPSQELGGPLPSPGPR 21 0 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 YSCPES(0.973)PS(0.027)QELGGPLPSPGPR;YSCPES(0.863)PS(0.137)QELGGPLPSPGPR 177.0 1.8248e-35 12436000.0 2006.88 2177.3 2142.94 2208.11 3465.1000000000004 2869.5 2772.9 2678.5 4224.1 3435.6 4203.6 True False 2345.5922804947822 2288.115269999783 2446.8411151472837 2749.0970491258263 2955.388380190213 3173.148585380057 3276.700037001027 3058.185577562225 3267.3480945016026 2659.495573872174 3159.7301065420056 0.7423394408397076 0.7241489598312199 0.7743829481135955 0.8700417302838646 0.9353293732497224 1.0042467167718754 1.0370189625426687 0.967862910579122 1.0340592342797827 0.8416844110722843 1.0 11.625585618196602 -6.563930102064473 1.1947123646331375 1.0145010963920669 0.7249626363346539 0.7553451783045487 0.05564911942923436 0.0556543483041039 0.15121889789662768 0.0031724946233563523 0.01102521521745501 2.729417036061539e-07 6.563930102064473 -0.289538460057413 YSCPESPSQELGGPLPS(ph)PGPR ddPTM_A549_MK2206_60min_R1 2 YSCPESPSQELGGPLPSPGPR 21 0 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 YSCPESPSQELGGPLPS(1)PGPR;YSCPESPSQELGGPLPS(1)PGPR 185.87 1.874e-44 26534700.0 3617.1000000000004 4194.4 3642.3999999999996 3515.8999999999996 4427.2 2946.32 3468.3999999999996 3494.35 5307.8 5279.3 6047.2 True False 4227.5780503954775 4407.8770442690875 4158.947090358325 4377.29565783475 3775.964744676375 3258.097626791068 4098.563384303204 3989.684813498059 4105.591774814897 4086.702463366914 4545.513345770483 0.9300551398290715 0.9697204053686337 0.9149565239376426 0.9629925873846006 0.8307014978164878 0.716772205678962 0.901672280451413 0.87771930473164 0.9032185063618996 0.8990629116004061 1.0 12.15022751848213 -10.229042903344302 0.8081011531504585 0.9957037458888057 0.8881596376657751 0.0361512363863814 0.07180140623042162 0.6486363163959967 0.8183372159060704 0.037778750922953956 0.01415579759217816 5.901427779126546e-11 10.229042903344302 -0.10754410822303062 YSDASDDS(ph)FSEPR ddPTM_A549_MK2206_60min_R1 1 YSDASDDSFSEPR 13 0 Q9NRF8 Q9NRF8 CTPS2 CTP synthase 2 1 YSDAS(0.001)DDS(0.993)FS(0.006)EPR 120.84 9.9238e-06 3058100.0 1416.1 1625.7 1623.2 1364.9 1894.7 1901.3 1460.2 1351.0 2280.3 2405.0 2553.8 True False 1655.1030596790329 1708.4411860738735 1853.3941678754743 1699.3005612726886 1615.992139893913 2102.4943040192024 1725.4994388650512 1542.5083872639786 1763.8156908908409 1861.708829654958 1919.6209787056277 0.8622030484346157 0.889988807699867 0.9655000588320257 0.8852271256269048 0.841828755686736 1.095265329636522 0.8988750685713646 0.8035484110535557 0.9188353901404828 0.9698314668921159 1.0 10.90660576950376 -8.938701122462255 0.012761376173952477 1.8745693231360492 2.1107733880901033e-06 0.11267707875317812 0.07364197626047568 876.3320473304498 8.064671639436902 597.3919007112119 586.1293156469119 1.1515926319483421e-09 8.938701122462255 -1.874567212362661 YSDEQLNS(ph)GRQS(ph)PSQNER ddPTM_A549_MK2206_60min_R1 1 YSDEQLNSGRQSPSQNER 18 1 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 2 Y(0.001)S(0.003)DEQLNS(0.992)GRQS(0.502)PS(0.501)QNER 59.943000000000005 0.00050622 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YSDEQLNS(ph)GRQS(ph)PSQNER ddPTM_A549_PD325901_60min_R1 1 YSDEQLNSGRQSPSQNER 18 1 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 2 Y(0.001)S(0.004)DEQLNS(0.995)GRQS(0.841)PS(0.159)QNER 64.68 0.00069863 10289000.0 716.53 911.31 763.86 885.23 1009.4 709.29 791.42 850.51 1060.5 755.65 1090.7 True False 789.2715981184937 988.1092919427226 815.7001330633285 939.9086465968023 938.5032262409567 703.5137774043499 821.5379211816417 833.5459108378124 1015.9308729880917 707.938130039964 956.5508145169612 0.825122498606684 1.0329919508162229 0.8527514907561294 0.9826018987516488 0.9811326403133971 0.7354693203200189 0.8588544473682788 0.8714078731496728 1.0620772650756836 0.7400946392978176 1.0 9.901697800169828 -8.75918320444256 24.999331073477858 1.029314267529955 0.8954932632301142 0.0 0.11821310923426813 46.54717527365475 515760.37774200167 0.013651661868983589 0.015122321559912931 1.741072257886607e-09 8.75918320444256 -0.13382100429984067 YSDEQLNS(ph)GRQSPS(ph)QNER ddPTM_A549_PD325901_60min_R1 1 YSDEQLNSGRQSPSQNER 18 1 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 2 YSDEQLNS(0.989)GRQS(0.224)PS(0.786)QNER 63.979 0.00074154 9715900.0 696.29 997.38 730.77 825.21 803.71 718.61 742.09 829.21 719.76 744.84 751.92 True False 766.9768482183939 1081.4327129054143 780.3644466769936 876.181347512112 747.260182248979 712.757878414386 770.3306410372296 812.6707560473395 689.5109902328226 697.8106752848105 659.4386068135997 1.1630754406758468 1.6399293303904143 1.1833769491411887 1.3286776637870976 1.1331762722533525 1.0808555505393056 1.168161270932345 1.2323675739492352 1.0456030070252216 1.0581889929930313 1.0 9.36509454179376 -6.710716694748475 0.31319938706760575 0.9931696348088943 1.4945171001143738 0.3871379571160076 0.1322419779607762 1.8275708894242353 0.24833296005820849 0.05566080105173344 0.319160267599293 1.9466295210239835e-07 6.710716694748475 0.5013474653054795 YSDEQLNSGRQS(ph)PSQNER ddPTM_A549_MK2206_60min_R1 2 YSDEQLNSGRQSPSQNER 18 1 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 YSDEQLNS(0.001)GRQS(0.997)PS(0.002)QNER;YSDEQLNSGRQS(0.998)PS(0.002)QNER 202.65 2.0745999999999994e-49 124668000.0 5766.1 5805.1 5673.0 6116.6 7189.700000000001 5301.799999999999 5203.6 5005.0 8261.6 8657.6 9570.0 True False 6739.276712389856 6100.554794413145 6477.516704261688 7615.167274584612 6132.104654138 5862.832956949991 6149.026763510602 5714.474077169661 6390.36079106423 6701.842147035661 7193.504881436626 0.9368557919215513 0.8480643156517597 0.9004674092843672 1.0586170997445372 0.8524501971163392 0.8150175823303417 0.8548026121979319 0.7943935774501641 0.8883514915733263 0.9316518522605388 1.0 12.812479148934134 -10.387977602221142 0.9540416769462323 0.994109528010857 0.8831628669558982 0.15148917404859108 0.0697097441493088 0.5298827125576954 0.9271791461756588 0.03512091821271388 0.012991931734050765 4.092817669890479e-11 10.387977602221142 -0.11094666105495876 YSDEQLNSGRQS(ph)PSQNER ddPTM_A549_PD325901_60min_R1 2 YSDEQLNSGRQSPSQNER 18 1 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 YSDEQLNSGRQS(0.999)PS(0.001)QNER;YSDEQLNSGRQS(0.998)PS(0.002)QNER 220.13 6.0175e-57 181793000.0 9564.7 9016.9 8527.5 9664.6 11304.9 10271.0 9101.3 10165.900000000001 10799.9 11602.900000000001 12119.0 True False 10535.701302840007 9776.785807813307 9106.227430023215 10261.560392100871 10510.882823787779 10187.356381339197 9447.654951922455 9963.133149505727 10346.017760663919 10870.290913836707 10628.439828670633 0.9912744930276164 0.919870269335302 0.8567793182080036 0.9654813460410163 0.9889393921612334 0.9584996994439772 0.8889032731254719 0.9374031664205112 0.9734277022254133 1.0227550881469611 1.0 13.375642215681367 -8.975660960106593 2.172175836047782 0.9900896076869858 0.93668219117544 0.3125664886935149 0.0396092679290856 0.29394690669696255 2.7710465743613044 0.007653306047516787 0.0077111828895544705 1.0576428551598017e-09 8.975660960106593 -0.05340741651154579 YSEEGLS(ph)PSK ddPTM_A549_MK2206_60min_R1 3 YSEEGLSPSK 10 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 YSEEGLS(0.874)PS(0.126)K;YSEEGLS(0.99)PS(0.01)K;YSEEGLS(0.999)PS(0.001)K 194.48 3.5398000000000004e-19 83493000.0 31757.0 32569.0 31917.0 29482.0 43714.0 34005.0 31593.0 34605.0 46887.0 43330.0 46793.0 True False 37116.8052158937 34226.6229865535 36443.31053233214 36705.09132349728 37283.728507585656 37603.38652930784 37333.03915358411 39510.36472336783 36267.16936315348 33541.72290600805 35173.006678899066 1.0552639288059713 0.9730934662201249 1.0361158733181361 1.043558535060278 1.060009707101692 1.0690978702104192 1.0614116528167292 1.1233149637750708 1.0311080225311196 0.9536211451075732 1.0 15.102181045059504 -4.89867216017506 20.630953899274065 1.03153964495335 3.977402934683544 0.010671045624356612 0.04490777441972531 2548.650427650912 562385.9924838715 0.005729715422404375 29633.434529031536 1.262780421428436e-05 4.89867216017506 2.9458632897301937 YSEEGLS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 YSEEGLSPSK 10 0 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 YSEEGLS(1)PSK;YSEEGLS(0.5)PS(0.5)K 252.97 7.171799999999998e-58 235060000.0 52248.0 50448.0 49234.0 52733.0 56110.0 52806.0 54979.0 56023.0 54141.0 53978.0 61179.0 True False 57552.17849705531 54699.430007271425 52575.31530809298 55990.19764466766 52169.02716899153 52375.96544377351 57071.25593066317 54905.57731580669 51865.64205039908 50569.81986805688 53654.37084563414 1.0726466006401478 1.019477614687608 0.9798887672982757 1.0435346974015183 0.9723164459254213 0.9761733222902071 1.0636832569495511 1.0233197491733212 0.9666620115557536 0.9425107231906299 1.0 15.711408081574477 -2.0000012177606186 0.8434598985383877 0.9930183538867067 27.95512229030426 0.29179206337199404 0.03402058905529311 545.9191653498432 1.4744608511867983 0.004918434773838471 28244.591449748874 0.00999997196006484 2.0000012177606186 26.962103936417552 YSEEGLS(ph)PSKR ddPTM_A549_PD325901_60min_R1 2 YSEEGLSPSKR 11 1 J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9 J3KPG5 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 YSEEGLS(0.965)PS(0.035)KR;YSEEGLS(0.996)PS(0.004)KR 125.84 1.0055e-06 486550000.0 12020.8 11452.9 13761.599999999999 12071.900000000001 13570.3 11502.8 13057.599999999999 12952.5 12878.8 12704.400000000001 12542.6 True False 13241.142766754747 12418.076076956047 14695.544931223389 12817.5538457259 12617.16894299352 11409.12501054119 13554.514113392892 12694.152226460314 12337.548823233416 11902.242015853528 10999.939714092265 1.2037468487023821 1.1289221940959346 1.3359659519221367 1.1652385539263501 1.1470216447485968 1.037198867183309 1.2322353090742766 1.154020163419401 1.1216014945452393 1.082027931535416 1.0 13.42520799653407 -13.448974699935674 0.13147214982877684 0.600089271038398 1.254035987631141 0.33854675337993967 0.07167199150878448 27.712705017537964 0.3703896861844418 3.2060379916639197 0.2180627881579594 3.55652036670857e-14 13.448974699935674 0.6539467165927431 YSEKEDKYEEEIK ddPTM_A549_MK2206_60min_R1 2 YSEKEDKYEEEIK 13 2 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YHD2;A0A5F9UN72;K7EPB9 P67936 TPM4 Tropomyosin alpha-4 chain 0 ; 67.358 0.0014728 14820800.0 4497.6 4020.5 4194.8 4052.8 5661.8 4696.9 4432.5 4197.8 6306.0 5867.3 5711.4 False True 5256.684924237288 4225.126277056046 4789.6857167348735 5045.736181937108 4828.956720141107 5193.922840450114 5237.827874790672 4792.851005223334 4877.701068612749 4541.8728549831785 4293.101753379009 1.22444918061862 0.9841663486616731 1.1156702058051648 1.1753125063867207 1.1248176720573506 1.2098298942861272 1.2200567737925356 1.116407502210024 1.1361717818063861 1.0579467051784568 1.0 12.067804652033333 -10.44809900068295 0.7420060740209985 0.9977412433170443 1.1438726640137458 0.3050378969101589 0.06596999253582285 0.5595729281294954 0.5456997704294573 0.04636285842558594 0.012811916108259129 3.563698869788727e-11 10.44809900068295 0.1461314206967015 YSEKEDKYEEEIK ddPTM_A549_PD325901_60min_R1 2 YSEKEDKYEEEIK 13 2 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YHD2;A0A5F9UN72;K7EPB9 P67936 TPM4 Tropomyosin alpha-4 chain 0 ; 89.46600000000001 6.2582e-05 25814000.0 7851.7 8646.7 9288.2 8841.0 11217.5 9394.1 9334.2 10512.8 9249.3 10292.8 10246.8 False True 8648.798803883963 9375.387754596284 9918.553106483927 9387.088490632186 10429.62149827415 9317.59756420393 9689.418088870232 10303.11395686794 8860.584086307168 9642.910851419756 8986.508559816997 0.9624203600669679 1.0432736687658823 1.1037159805126708 1.0445757023596878 1.1605866092322 1.0368428964578513 1.0782183118587658 1.1465091128870804 0.9859873862388673 1.0730430831099242 1.0 13.133544993080871 -8.8022840242386 24.999719062041383 0.9933828916561261 1.0731880900553994 0.09825731910358482 0.056984825418427996 119.43267619121984 73100.45813426461 0.008618177825484739 0.009174797802083889 1.5765798650409366e-09 8.8022840242386 0.07980519839927325 YSFLQFDPAPR ddPTM_A549_MK2206_60min_R1 1 YSFLQFDPAPR 11 0 H0YBN9;P67775-2;P67775;P62714 H0YBN9 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform 0 50.909 0.049505 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YSGLTAS(ph)SKK ddPTM_A549_MK2206_60min_R1 1 YSGLTASSKK 10 1 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 YSGLT(0.046)AS(0.81)S(0.143)KK 62.042 0.0030215999999999997 10493000.0 4709.3 4467.2 5550.8 5723.2 7134.2 5765.1 4732.5 4825.6 7050.2 7769.5 6916.2 True False 5504.114708669212 4694.561399046078 6337.986906754061 7125.384256924212 6084.768630617596 6375.159055436339 5592.33399152777 5509.643577780201 5453.340956855942 6014.364553847904 5198.716662590589 1.0587448914606625 0.9030231312330678 1.2191445154842808 1.3706044624816194 1.1704366722662425 1.2262947702673055 1.075714326146991 1.0598083979892592 1.048978298066829 1.1568940844817779 1.0 12.343939813104155 -8.073328292197887 2.6525730472047933 1.0258465726764405 1.1590998190497723 0.08763289888060855 0.116491823627825 0.3358652065023334 4.662875943859897 0.01929724509526039 0.02604440430741951 8.446401228083542e-09 8.073328292197887 0.1332532463733318 YSGLTAS(ph)SKK ddPTM_A549_PD325901_60min_R1 2 YSGLTASSKK 10 1 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 YSGLT(0.004)AS(0.88)S(0.117)KK;YSGLT(0.081)AS(0.788)S(0.131)KK 78.486 0.00055532 47514000.0 16967.6 15624.599999999999 15643.3 16271.7 20123.1 16796.5 17197.4 17347.7 19288.8 17790.3 18703.6 True False 18690.138261113065 16941.33987653847 16704.94840880472 17276.765953288057 18709.722876926287 16659.71487286182 17851.85646777838 17001.68651449262 18478.158814608865 16667.017421888402 16403.175771889088 1.1394219339613036 1.0328085312340345 1.0183972080231436 1.0532573809820465 1.1406158866498304 1.0156395995836596 1.0883170866444025 1.036487491869058 1.126498860438707 1.0160847907544508 1.0 14.001687537490657 -5.248934452932347 23.682262957645502 1.059160370558044 1.1394220405728361 0.22442360063326738 0.04489792553038001 1340.051557212701 2537741.437731999 0.007001508828326104 0.16076246372634023 5.6372273078139276e-06 5.248934452932347 0.08026167001479223 YSGSEGSTQTLTK ddPTM_A549_MK2206_60min_R1 1 YSGSEGSTQTLTK 13 0 P25815 P25815 S100P Protein S100-P 0 116.01 4.8506999999999995e-05 1492900.0 1054.6 1464.5 1072.2 1205.7 1471.2 1157.0 1018.6 1022.3 1914.4 1659.4 2076.7 False True 1232.5906975054797 1539.0367946147435 1224.2540825505703 1501.0965541259304 1254.7884288868559 1279.432972045557 1203.6664350280384 1167.214155662446 1480.7914566686072 1284.5403874966485 1560.9980759957605 0.789617051077536 0.9859312565987579 0.7842764839858106 0.9616261398454198 0.8038372680801842 0.8196249513180258 0.7710877121102278 0.7477358067324203 0.9486183740002437 0.8228968422509043 1.0 10.608253043788872 -8.922125545003878 6.826763253864139 0.9776097776440223 0.8372954278338854 0.10971326849208052 0.08579260823054917 0.14505297125520938 10.33160511237247 0.012404358629442572 0.0131272485854276 1.196394629881461e-09 8.922125545003878 -0.1403143498101369 YSGSKS(ph)PGPSR ddPTM_A549_PD325901_60min_R1 2 YSGSKSPGPSR 11 1 G5E9L9;Q8N568-2;Q8N568;A0A0U1RR70;Q8N568-3 G5E9L9 DCLK2 Serine/threonine-protein kinase DCLK2 1 Y(0.005)S(0.038)GS(0.047)KS(0.907)PGPS(0.002)R;Y(0.028)S(0.106)GS(0.194)KS(0.619)PGPS(0.053)R 70.26 0.00087373 63370000.0 10743.3 10587.0 10498.7 10371.1 12388.0 11543.8 10801.0 11360.8 10716.400000000001 11544.599999999999 11756.5 True False 11833.951907200551 11479.203645079724 11211.204915811759 11011.69929252296 11517.909616279934 11449.79112013469 11212.037965533991 11134.199931624813 10266.026975284847 10815.671985786232 10310.525030593803 1.1477545393747046 1.1133481186475152 1.087355385156956 1.068005679618507 1.117102143887293 1.1104954486954264 1.0874361812095101 1.0798868048510595 0.9956842105346799 1.048993329989844 1.0 13.331830178768378 -8.671639776259958 3.173155345536885 0.9975175007172599 1.1027858046030161 0.6984142611686721 0.0249368020274382 0.06367903522000486 1.274281169533753 0.003507727221057195 0.003930980241112683 2.1299049542673067e-09 8.671639776259958 0.10526830388575625 YSGVNQS(ph)MLFDK ddPTM_A549_PD325901_60min_R1 2 YSGVNQSMLFDK 12 0 Q6PL18 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 YSGVNQS(1)MLFDK;YSGVNQS(1)MLFDK 73.067 0.00055894 11170200.0 7175.6 7123.200000000001 6499.0 6680.8 8154.1 6930.4 7406.4 7886.2 8035.099999999999 7244.7 7926.5 True False 7904.061629602471 7723.497062872572 6940.06122166179 7093.45784280234 7581.38414611788 6873.961120166796 7688.25460493759 7728.9035543957825 7697.4126898129325 6787.268405611763 6951.590750223428 1.1370148090706333 1.111040241059118 0.9983414546431308 1.0204078602547701 1.090597018513239 0.988832825054591 1.1059705441794723 1.111817975496813 1.1072879526985293 0.9763619075811701 1.0 12.763127435858948 -10.95686798468596 1.2520603427993975 1.000456936817828 1.0751145499973291 0.31166427200238067 0.04845637039018379 0.5413846807787316 1.5238082942860165 0.03393175235070008 0.00809671291814834 1.104414284864767e-11 10.95686798468596 0.07465761317950115 YSHSGS(ph)SS(ph)PDTK ddPTM_A549_MK2206_60min_R1 2 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 YSHS(0.021)GS(0.855)S(0.166)S(0.95)PDT(0.008)K;YSHS(0.018)GS(0.873)S(0.444)S(0.411)PDT(0.253)K 77.597 0.0012195 8430000.0 1705.6799999999998 1748.01 1617.69 1321.96 1919.4099999999999 1776.48 1291.46 1430.3000000000002 2380.6000000000004 2667.0 2573.6 True False 1993.5570841277702 1836.9762426456261 1847.102767022227 1645.8402593450392 1637.0673316270527 1964.4659344680151 1526.1015650709899 1633.0494051100432 1841.3979010370283 2064.5228476880548 1934.5040922534258 1.0305261653934037 0.9495850900505496 0.9548197775434072 0.8507814824148892 0.8462465074034032 1.015488125527658 0.7888851572773339 0.8441695272961505 0.9518707706077055 1.0672103801461466 1.0 10.917748065326121 -9.181851551772354 2.469181128652765 0.9828675840433816 0.9084175122023845 0.22598418021791233 0.0763060713273703 0.3413584028170351 4.311255925933348 0.014334276180664846 0.013525483185828463 6.578826728799057e-10 9.181851551772354 -0.07445007184099706 YSHSGS(ph)SS(ph)PDTK ddPTM_A549_PD325901_60min_R1 1 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 YSHS(0.017)GS(0.755)S(0.24)S(0.986)PDT(0.002)K 136.96 2.9731999999999998e-08 8836000.0 1803.1 1750.3 1752.3 2376.6 2110.6 1829.3 2199.3 1587.2 1714.2 2194.3 2260.8 True False 1986.1493846279354 1897.8039236783843 1871.2216154359062 2523.3971843497843 1962.3587371747208 1814.4027873024816 2282.9955650031384 1555.5420508656878 1642.158135291076 2055.7515235184196 1982.7359323919918 1.0017215869144136 0.9571642358792859 0.9437573530926261 1.2726844473462149 0.9897226882892631 0.915100572729102 1.1514370258317306 0.7845432291071998 0.8282283628712778 1.0368256760436783 1.0 10.953276831922851 -8.261354359677078 24.999999995698747 0.9065435071592244 1.0297381906739491 0.19858607465078937 0.11628571168070993 9.668279767980797 2843033.9896808066 0.019170704675424557 0.02396625047562702 5.478297844610622e-09 8.261354359677078 0.12319468351472473 YSHSGSS(ph)S(ph)PDTK ddPTM_A549_PD325901_60min_R1 1 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 YSHS(0.001)GS(0.392)S(0.611)S(0.996)PDTK 144.7 9.4889e-12 9623600.0 1713.6 1945.0 1797.8 1840.9 2476.6 2229.3 1897.4 1743.1 2100.0 2216.2 2392.5 True False 1887.5634105143536 2108.911975978094 1919.8095190496329 1954.6082120127573 2302.6521598061745 2211.145319922061 1969.6065952971194 1708.3325030645024 2011.7443029467158 2076.268753780941 2098.237667307079 0.8995946645724319 1.0050872733996403 0.9149628514264333 0.9315475756001185 1.0974219916476122 1.05381070713495 0.9386956615953581 0.8141749286471495 0.9587780899618629 0.9895298259732734 1.0 11.034962385849663 -5.9359612440005725 0.003985562282751349 1.9150298936458503 3.4409776092625524e-08 0.01383969107619909 0.07347900507474099 116827.83968863332 84.78603793149722 19873.2099538751 20874.09900020776 1.1588807688861768e-06 5.9359612440005725 -1.9150298592360742 YSHSGSS(ph)SPDTK ddPTM_A549_MK2206_60min_R1 1 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 YSHSGS(0.008)S(0.698)S(0.293)PDTK 138.75 1.2928e-08 4560200.0 337.74 680.36 538.21 382.56 614.75 497.29 321.4 663.91 1205.5 1011.3 1447.2 True False 394.7422550497823 714.9874179474815 614.5362710031171 476.28721717377084 524.3210893544004 549.9128977256138 379.79421973101427 758.0212756391022 932.4561747879269 782.8466276216466 1087.8202993119205 0.3628745072136168 0.6572661113234721 0.5649244377879601 0.4378363020758456 0.48199237473877765 0.5055181430916948 0.3491332345712299 0.696825823271154 0.8571785021641294 0.7196470116588383 1.0 10.087224537294624 -8.66952915655477 2.079641904026012 0.941537497638772 0.48928895831449887 0.6834629171319297 0.1102698256935848 0.08628828926570943 0.7358777605863631 0.016809821843853764 0.018737438995256463 2.140281233207975e-09 8.66952915655477 -0.45224853932427317 YSHSGSSS(ph)PDTK ddPTM_A549_MK2206_60min_R1 1 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 YSHSGSS(0.02)S(0.98)PDTK 191.29 9.909999999999999e-20 3158800.0 178.96 576.32 731.76 469.53 718.54 608.87 557.69 988.26 1420.4 1625.5 1674.5 True False 209.1640728480757 605.6522263382515 835.5345713926556 584.5648710780029 612.8437178441823 673.300219264804 659.0150541437131 1128.3488814193179 1098.6816679127091 1258.2984210412199 1258.6754361510586 0.1661779254925994 0.48118220864807976 0.6638205111459566 0.4644286003273102 0.48689574789686485 0.5349275912809651 0.5235782277271852 0.8964573781385055 0.8728871926446747 0.9997004667772085 1.0 10.297690600267462 -8.260340270927058 2.2911232180499455 0.9413930209342596 0.4747857647244818 0.7900885525176167 0.11622896365921885 0.10449057574752295 1.0766446211844345 0.019927570851165432 0.025521012674400823 5.491104756949964e-09 8.260340270927058 -0.4666072562097778 down YSHSYLS(ph)DSDTEAK ddPTM_A549_MK2206_60min_R1 1 YSHSYLSDSDTEAK 14 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 YSHSYLS(0.999)DS(0.001)DTEAK 127.83 3.7466e-09 28388000.0 5825.5 6312.8 5179.8 4924.9 8605.2 6009.5 5460.3 6344.5 9880.0 8698.0 9259.9 True False 6808.701980199286 6634.094555851115 5914.373528068871 6131.500721087164 7339.386479239513 6645.421301216749 6452.365830731978 7243.852304216364 7642.195775117969 6733.115758976649 6960.411269761227 0.9782039762189015 0.9531181849371803 0.8497161013693606 0.8809106938443166 1.054447243818006 0.9547454947219974 0.9270092787136877 1.040721880284074 1.0979517558565373 0.9673445286527766 1.0 12.764956837764165 -8.27158862017132 17.47994172117408 1.0471326917848833 0.9418227132922851 0.2995113178284494 0.05871899614548971 9.314404727618143 16041.963920103293 0.010002354885305537 0.012221197093234876 5.350709584665511e-09 8.27158862017132 -0.10530997849259827 YSHSYLS(ph)DSDTEAK ddPTM_A549_PD325901_60min_R1 3 YSHSYLSDSDTEAK 14 0 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 YSHSYLS(1)DSDTEAK;YSHS(0.002)YLS(0.986)DS(0.01)DT(0.001)EAK;YSHSYLS(0.999)DS(0.001)DTEAK 234.9 3.0093000000000006e-57 98852600.0 22359.6 21708.300000000003 23907.6 22640.5 27277.7 23673.4 23331.1 22889.9 25739.8 27586.4 28273.8 True False 24629.53013173246 23537.734626285484 25530.113504077737 24038.952264693795 25361.808454956357 23480.611679290745 24218.977777767792 22433.342987720825 24658.04571856564 25844.589996075534 24796.30184238532 0.9932743313211411 0.9492437531975628 1.0295935928815838 0.9694571560507076 1.0228060868175266 0.9469400650364074 0.9767173319518685 0.9047051907302808 0.9944243248570498 1.0422759877804977 1.0 14.597837350504758 -8.967456852021607 24.999944572025047 0.9975402187583198 0.9741281389847853 0.15312010317457636 0.03570888250286296 316.59588520718466 243213.53593272888 0.005518562326124923 0.005834330162851465 1.0778123310692038e-09 8.967456852021607 -0.023412079773534433 YSHSYLS(ph)DSDTEAKLTETNA ddPTM_A549_PD325901_60min_R1 2 YSHSYLSDSDTEAKLTETNA 20 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 YSHS(0.001)YLS(0.898)DS(0.102)DTEAKLTETNA;YSHS(0.001)YLS(0.997)DS(0.002)DTEAKLTETNA 206.01 4.5716e-56 24462000.0 3719.0 4669.7 4494.3 4584.1 4862.4 4611.0 4694.5 5278.4 4490.4 5304.6 5221.2 True False 4096.550142216903 5063.2320073135725 4799.310224421383 4867.249445753536 4520.881798369354 4573.449544772178 4873.151766428969 5173.118171175303 4301.684103786635 4969.666650711304 4579.025499913778 0.8946336163216475 1.1057444444039266 1.0481073373607013 1.0629443854036595 0.9873021669030849 0.998782283448366 1.0642333759706577 1.1297421626659891 0.9394322228316123 1.0853109795533749 1.0 12.160824883850598 -8.811803386980777 24.99999948396597 0.9713985486199931 1.0380535334961765 0.0 0.06999876780269265 122.60783502318058 60860.276120677256 0.01036153118529437 0.011030700958798783 1.5423985668270897e-09 8.811803386980777 0.06665498487618338 YSHSYLSDS(ph)DTEAKLTETNA ddPTM_A549_MK2206_60min_R1 2 YSHSYLSDSDTEAKLTETNA 20 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 YSHSYLS(0.001)DS(0.999)DTEAKLTETNA;YSHSYLS(0.021)DS(0.946)DT(0.034)EAKLTETNA 152.47 2.9041e-22 16484400.0 2823.5 3877.3 3295.0 2698.2 4663.7 3185.6000000000004 3455.6000000000004 2806.5 5690.799999999999 5800.1 5372.4 True False 3300.0377720526476 4074.6380087126977 3762.2805465436754 3359.2591211268013 3977.6759079660305 3522.6980775698603 4083.437789989089 3204.329969545783 4401.842886340219 4489.853381655604 4038.284809303042 0.8171879715988118 1.0090021385628642 0.9316530963533002 0.8318529474166949 0.984991424775839 0.8723253172868296 1.0111812273819885 0.7934878595397561 1.0900278445442093 1.1118218733142047 1.0 11.979526948298084 -8.783341480904513 24.999952090527138 1.0425131536604335 0.9132017045712693 0.45489755712930113 0.07685833373423097 166.49555521504502 190043.94409605608 0.012236415549418395 0.013031882003839526 1.6468669691849e-09 8.783341480904513 -0.12931144908916425 YSHSYLSDS(ph)DTEAKLTETNA ddPTM_A549_PD325901_60min_R1 2 YSHSYLSDSDTEAKLTETNA 20 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-2;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 YSHSYLS(0.009)DS(0.99)DT(0.001)EAKLTETNA;YSHSYLS(0.048)DS(0.952)DTEAKLTETNA 194.75 3.387e-55 31917000.0 8208.6 9828.3 9143.2 9573.8 11743.4 11200.0 9692.8 10205.0 11400.5 11367.0 10685.6 True False 9041.931029148061 10656.565333421844 9763.712534528087 10165.151882322634 10918.584096530667 11108.790913348166 10061.664808103682 10001.453269332378 10921.376631306677 10649.285680095649 9371.338941599375 0.9648494292540128 1.1371443717735306 1.0418695338386457 1.0847064593085545 1.1651039584176248 1.185400611649659 1.073663525650529 1.0672384524409768 1.1654019451613988 1.1363675720684339 1.0 13.194039474105033 -5.247498391198614 23.454716964118656 1.0915718475312288 0.9648492231673766 0.310841638695848 0.05685778626763991 1207.3908653719682 2031264.1393888271 0.00952980244121111 0.24838826934876662 5.655898522575033e-06 5.247498391198614 -0.12672262436385218 YSHVS(ph)QHSPSKK ddPTM_A549_PD325901_60min_R1 1 YSHVSQHSPSKK 12 1 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 Y(0.002)S(0.002)HVS(0.561)QHS(0.407)PS(0.028)KK 46.318000000000005 0.0086166 3541900.0 756.69 958.08 532.19 846.13 917.89 1112.6 897.25 707.69 884.59 913.82 917.2 True False 833.5086117542638 1038.820763982053 568.3076137184469 898.393528399345 853.4205729485952 1103.5393544813544 931.3953397440397 693.5745677779349 847.4137585445883 856.1212492465032 804.3902146098442 1.0361993428258485 1.2914388379101744 0.706507368434479 1.1168628261286042 1.0609534495176975 1.3718955482527935 1.157889942999614 0.8622364558653184 1.053485911630106 1.0643108701437278 1.0 9.651751721169706 YSHVSQHS(ph)PSKK ddPTM_A549_PD325901_60min_R1 1 YSHVSQHSPSKK 12 1 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 YSHVS(0.004)QHS(0.815)PS(0.18)KK 41.378 0.021 3563100.0 765.39 666.46 622.45 811.91 860.63 905.56 406.35 553.8 700.86 681.46 851.92 True False 843.091829349662 722.6249231415733 664.6932000959195 862.0598367186033 800.182317812319 898.185419597461 421.813871613252 542.7540245523046 671.4052915063023 638.4324993013086 747.1392407658288 1.128426648405564 0.967189091019864 0.8896510366857442 1.153814161648074 1.0709949018232803 1.2021660362488893 0.5645719681125121 0.7264429371906281 0.8986347589213785 0.8545027010586483 1.0 9.5452333260188 YSISLS(ph)PPEQQK ddPTM_A549_MK2206_60min_R1 2 YSISLSPPEQQK 12 0 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 YSIS(0.004)LS(0.996)PPEQQK;YSIS(0.015)LS(0.985)PPEQQK 158.42 7.2328e-14 5967900.0 4694.700000000001 4955.1 4875.8 4045.0 6790.1 4530.1 5174.9 5226.9 6561.2 6374.9 6862.4 True False 5487.050585604947 5207.293425056687 5567.261756855127 5036.025181586947 5791.285284791078 5009.4721751629895 6115.112345009418 5967.829081709907 5075.098676083403 4934.805662439668 5158.276687395057 1.0637371583833983 1.0095025413780943 1.0792871523273422 0.9762999324741831 1.1227170692380388 0.9711522818084398 1.1854952178025886 1.1569424137896869 0.9838748449622894 0.9566771930824357 1.0 12.33267344530894 YSISLS(ph)PPEQQK ddPTM_A549_PD325901_60min_R1 2 YSISLSPPEQQK 12 0 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 YSIS(0.02)LS(0.98)PPEQQK;YS(0.002)IS(0.051)LS(0.947)PPEQQK 125.36 4.0438e-06 9699700.0 9300.8 9203.2 8530.3 9881.900000000001 12544.1 10103.2 9128.0 9538.5 10238.9 10955.3 10365.5 True False 10245.010369112926 9978.785962633208 9109.217454860984 10492.282519576771 11663.045690795698 10020.922888905285 9475.371035033253 9348.247134691512 9808.594639733868 10263.5804883568 9090.609212318292 1.1269883161659129 1.0977026654177793 1.0020469742025075 1.154189149981184 1.2829773471058032 1.1023378802078925 1.042325196664882 1.0283411063390675 1.0789810023339983 1.1290310966672141 1.0 13.150161265345446 -9.371690890718542 0.4214231711141262 1.001325410898422 1.1215222693187796 0.011308218563536698 0.07714945732514743 1.1543152097860223 0.4914491442874668 0.0534822204990464 0.02930041653001637 4.249218946800679e-10 9.371690890718542 0.12019685842035766 YSISLS(ph)PPEQQKK ddPTM_A549_MK2206_60min_R1 2 YSISLSPPEQQKK 13 1 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 YSIS(0.003)LS(0.996)PPEQQKK;YS(0.001)IS(0.043)LS(0.956)PPEQQKK 66.965 0.0019367000000000002 12478400.0 6641.6 8284.9 8179.9 7462.200000000001 10084.7 7891.4 7484.6 7595.900000000001 11556.2 11715.4 10826.3 True False 7762.539708469933 8706.56602233096 9339.93282023448 9290.439334990888 8601.253989121305 8726.46271011263 8844.454937768356 8672.642086468139 8938.739151459344 9068.883003301331 8137.83091932051 0.9538831397983982 1.069887800403936 1.147717728818866 1.1416358274210272 1.0569467557627126 1.0723327624557317 1.0868319857531334 1.0657191298823747 1.0984179003077281 1.114410350032016 1.0 12.9904285903389 -10.823883005986048 0.9218225015934812 0.9968186600546534 1.0812053078631712 0.0 0.058824086516564116 0.6847010032230898 0.9672425039400228 0.04063048914666241 0.008631744850043055 1.5000888880305162e-11 10.823883005986048 0.08438664780851779 YSISLS(ph)PPEQQKK ddPTM_A549_PD325901_60min_R1 2 YSISLSPPEQQKK 13 1 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 YSISLS(1)PPEQQKK;YSIS(0.001)LS(0.999)PPEQQKK 94.461 7.2148e-05 23930000.0 16769.0 17894.9 18556.1 17512.0 22710.0 18645.6 18361.9 19275.3 22096.0 18558.800000000003 20293.2 True False 18471.376535314666 19402.966025157013 19815.428532894017 18593.67646736238 21114.927945246807 18493.756415528987 19060.67215251723 18890.839020319672 21167.381960909814 17386.99420073538 17797.26504919372 1.0378772516034134 1.0902217824775293 1.1133973943817692 1.0447490901533065 1.186414198298597 1.0391347414566274 1.0709888345108816 1.0614461810903633 1.1893615059617697 0.9769475339427544 1.0 14.119367935172436 YSLDPENPTK ddPTM_A549_PD325901_60min_R1 2 YSLDPENPTK 10 0 A0A087WXM6;J3QQT2;J3KRX5;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3KSJ0;A0A087WY81 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 0 ; 94.363 0.00093388 2165800.0 4519.2 3610.0 3609.6 3745.4 4595.7 5117.7 3795.3 4058.3 4833.3 4658.3 5480.6 False True 4977.985857140794 3914.2273692961035 3854.5691622881054 3976.744851579435 4272.913886304303 5076.02314796803 3939.732218367848 3977.354022825241 4630.173209253507 4364.174143009549 4806.520944385863 1.0356733934458782 0.814357705830455 0.8019457746856048 0.8273645111698458 0.8889826832639048 1.0560701194690418 0.8196640072835955 0.8274912496679933 0.9633107319883137 0.9079694426603954 1.0 12.230777304988434 -8.909072289371545 5.938268007521079 0.9840853015435294 0.8809011778839216 0.10784915084097613 0.08578150125700358 0.22099838002165753 11.575099679788362 0.01445692185801165 0.015282003411722376 1.2328995970153405e-09 8.909072289371545 -0.10318412365960772 YSLQSANASSLSSGQLKS(ph)PSLSQSQASR ddPTM_A549_MK2206_60min_R1 2 YSLQSANASSLSSGQLKSPSLSQSQASR 28 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 YSLQSANASSLSSGQLKS(0.484)PS(0.484)LS(0.031)QSQASR;YSLQSANASSLSS(0.001)GQLKS(0.943)PS(0.038)LS(0.012)QS(0.004)QAS(0.003)R 131.27 1.1803e-27 14459400.0 2000.71 1954.44 1767.1100000000001 1537.5 2197.95 1908.63 1345.0 2064.2 2784.3 2918.2 2646.9 True False 2338.380935336799 2053.9126479118067 2017.7127698339289 1914.1875690209986 1874.6344666067575 2110.599959753945 1589.369090038004 2356.8066713473736 2153.6604956134597 2258.976593222079 1989.6016792763435 1.1753010462814413 1.032323539583488 1.0141290042375768 0.9620958752493743 0.9422159652019384 1.060815328886137 0.7988378310054947 1.1845620638019312 1.0824581211636228 1.1353913784610958 1.0 10.95826391500276 -13.496802947424158 16.830125577106177 1.0361545732555333 1.029265557072 0.0 0.10737028957321566 0.0 0.0 0.0 0.012608705515842056 3.185642616515161e-14 13.496802947424158 -0.006889016183533325 YSLQSANASSLSSGQLKS(ph)PSLSQSQASR ddPTM_A549_PD325901_60min_R1 2 YSLQSANASSLSSGQLKSPSLSQSQASR 28 1 Q9H2P0;A0A669KBJ7;A0A2R8Y6X0 Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein 1 YSLQSANASS(0.001)LS(0.03)S(0.03)GQLKS(0.904)PS(0.025)LS(0.006)QS(0.001)QAS(0.002)R;YSLQSANASSLSSGQLKS(0.97)PS(0.026)LS(0.002)QSQAS(0.001)R 178.34 4.434499999999999e-58 19506000.0 2778.3 3285.6 2447.0 3514.7 3019.4 2987.8 2901.5 3374.7 2524.1 2789.6 2436.4 True False 3060.3509707236417 3562.489042814201 2613.0681350063674 3731.7950365371503 2807.3277603645174 2963.4683474019334 3011.918170261721 3307.388961099066 2418.020854794194 2613.4641799238857 2136.7382456121054 1.4322535654557687 1.6672557109556791 1.2229238374763163 1.7464914311336779 1.3138379331813337 1.3869122029745842 1.4095868674821728 1.5478680965677232 1.1316411169031657 1.2231091877026865 1.0 11.061194470672588 -8.866625197760246 4.359665475451599 1.0562965352510043 1.4640691781760338 0.5033705910351469 0.15137486240084597 0.09523518426830502 3.121130674316859 0.023833280743661332 0.02520472152216304 1.3594861961528562e-09 8.866625197760246 0.40777264292502946 YSLS(ph)PSK ddPTM_A549_MK2206_60min_R1 1 YSLSPSK 7 0 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37;F8W705;Q99666-2 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YSLS(0.913)PS(0.087)K 82.426 0.014968 271880000.0 4401.4 4393.0 4466.6 4170.7 4950.7 4136.8 4331.7 4049.8 5757.0 5845.3 5977.1 True False 5144.248716101473 4616.584935979905 5100.031043760845 5192.521687229838 4222.4585881526355 4574.553430214404 5118.713819567002 4623.871551992346 4453.048692039896 4524.842670262839 4492.821110432061 1.1449929987545768 1.0275470183445479 1.1351511485553873 1.1557374664157258 0.9398234392970466 1.0181917592028238 1.1393095103834996 1.0291688536754766 0.9911475624302478 1.0071272723849223 1.0 12.13340590422865 -7.042323368470558 0.3570420207913411 0.9904550630055641 1.13123888889916 0.25469311607307155 0.06224815705612864 1.99446462052232 0.4109137847078564 0.024290043346357575 0.10476032103366198 9.071448336506483e-08 7.042323368470558 0.14078382589359595 YSLS(ph)PSK ddPTM_A549_PD325901_60min_R1 2 YSLSPSK 7 0 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;Q99666;O14715;J3KQ37;F8W705;Q99666-2 P49792;J3KNE0;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 Y(0.003)S(0.037)LS(0.848)PS(0.112)K;Y(0.003)S(0.125)LS(0.762)PS(0.111)K 101.46 0.010939 383530000.0 9897.3 9078.8 9406.4 8525.7 10526.7 9742.5 10676.3 9775.0 10600.099999999999 11393.400000000001 11538.0 True False 10902.066609992826 9843.902338051375 10044.774869278264 9052.313125730441 9787.34090714353 9663.160310115583 11082.592438795526 9580.029956660843 10154.614659840707 10674.018779590191 10118.899145408179 1.0773965085856239 0.9728234461669091 0.9926746699354593 0.894594658534398 0.9672337639203465 0.9549616189722175 1.0952369699054327 0.9467462635012162 1.0035295849794823 1.054859686434756 1.0 13.304764724537328 YSPKT(ph)PPR ddPTM_A549_MK2206_60min_R1 2 YSPKTPPR 8 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 Y(0.004)S(0.043)PKT(0.953)PPR;YSPKT(1)PPR 76.22800000000001 0.0018581 204330000.0 12704.0 13612.800000000001 12841.3 11891.1 20394.5 16547.6 14496.599999999999 15115.5 21076.7 19595.9 19417.1 True False 14848.124617020294 14305.633375030107 14662.389433180964 14804.42003381177 17394.496066430784 18298.6560485921 17130.444572970213 17258.168414277327 16302.861102573772 15169.172580056395 14595.298185302297 1.0173224574454118 0.9801535531104196 1.0045967713044897 1.014328028509898 1.1917876459658305 1.2537363619620423 1.1736961009964735 1.1824471275041564 1.1169940412036952 1.0393191278087075 1.0 13.833216065282567 -6.554801993328055 24.53722351924739 1.0986461336733677 1.0004413506820387 0.368183037278523 0.0736605589703631 199.18838550446128 153101.80606605 0.013529529319331225 0.028164155640996138 2.7873917267030564e-07 6.554801993328055 -0.09820478299132906 YSPKT(ph)PPR ddPTM_A549_PD325901_60min_R1 2 YSPKTPPR 8 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1 P49792;J3KNE0 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 Y(0.001)S(0.008)PKT(0.991)PPR;Y(0.001)S(0.021)PKT(0.979)PPR 66.056 0.0034290999999999996 257990000.0 18616.6 18603.1 18151.5 18122.4 22804.0 17530.1 17593.1 18435.6 18693.4 19729.2 20924.0 True False 20506.54352718342 20170.848524585133 19383.369943836573 19241.77948904341 21202.3257095292 17387.34067768613 18262.61504781372 18067.88749555158 17907.781406049602 18483.494944993665 18350.480648164383 1.117493537109869 1.0992000106876134 1.056286770656087 1.0485708716827635 1.1554098290962254 0.9475141829282495 0.9952118093234004 0.984600231567173 0.9758753326083007 1.0072485456582625 1.0 14.16353023115427 -7.270276878182964 24.996569109052263 0.9859905558863327 1.0908300403697495 0.7634777157955723 0.030523476614157514 230.87955700292673 653035.0120539711 0.004335422380426457 0.006991131154040599 5.366895286097951e-08 7.270276878182964 0.10483948448341684 YSPKT(ph)PPRWAEDQNSLLK ddPTM_A549_MK2206_60min_R1 2 YSPKTPPRWAEDQNSLLK 18 2 P49792;Q7Z3J3;J3KNE0;A6NKT7 P49792;J3KNE0 RANBP2;RGPD4;RGPD3 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3 1 YS(0.006)PKT(0.994)PPRWAEDQNSLLK;YS(0.028)PKT(0.972)PPRWAEDQNSLLK 156.23 4.9893999999999995e-23 19648900.0 5630.5 6540.4 5925.4 5325.700000000001 7583.2 6261.7 6151.5 4983.9 7795.8 9516.6 10129.1 True False 6580.790747491562 6873.278423692915 6765.710819572047 6630.496739079763 6467.721325404299 6924.3089378199375 7269.147923694264 5690.383087553616 6030.063747334482 7366.793450434258 7613.764921061617 0.8643280710292768 0.902743714174793 0.8886156703967 0.870856508944493 0.8494774126152662 0.9094461162920241 0.9547376362495702 0.747380979916068 0.7919949998264048 0.9675625038088354 1.0 12.894394311292727 -10.98873730650137 1.2997143150988826 0.9990440909153557 0.8589016567199071 0.4129044667186451 0.054325238720151076 0.33412153955638974 1.015456242939152 0.04048100945789053 0.009552765365199289 1.0262725042389197e-11 10.98873730650137 -0.14014243419544858 YSPKT(ph)PPRWAEDQNSLLK ddPTM_A549_PD325901_60min_R1 2 YSPKTPPRWAEDQNSLLK 18 2 P49792;Q7Z3J3;J3KNE0;A6NKT7 P49792;J3KNE0 RANBP2;RGPD4;RGPD3 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3 1 YS(0.009)PKT(0.991)PPRWAEDQNSLLK;YS(0.005)PKT(0.995)PPRWAEDQNSLLK 172.42 8.1415e-31 36114000.0 9451.2 8775.6 8910.3 9746.8 10751.4 13675.8 10837.900000000001 10859.0 12524.2 11467.1 14071.9 True False 10410.678866394292 9515.150609970879 9515.006539986613 10348.83769941112 9996.258754316445 13564.428818997034 11250.342215226443 10642.408726279298 11997.851428078702 10743.065349012471 12341.145509123702 0.8435747604383861 0.7710103250088421 0.7709986510532795 0.8385637858139112 0.8099944001896985 1.0991223471896485 0.9116124760792393 0.8623517742669397 0.9721829646371801 0.8705079557704117 1.0 13.591188691673029 -7.17426971734109 9.732347919595838 0.9768976367697396 0.8042182193534835 0.5254181106645782 0.06684720917704791 0.21329068077934304 22.709629634084315 0.008698716918393835 0.015079638789682864 6.69468708663495e-08 7.17426971734109 -0.17267941741625614 YSPPAIS(ph)PLVSEK ddPTM_A549_MK2206_60min_R1 2 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 YS(0.002)PPAIS(0.998)PLVSEK;YSPPAIS(0.996)PLVS(0.004)EK 124.3 4.4785e-06 31130000.0 2398.2 2851.4 2176.31 1989.9 3554.0 2615.1000000000004 2368.8999999999996 1870.0700000000002 3672.1000000000004 3675.4 3995.2 True False 2802.957529639331 2996.524080685885 2484.943482928213 2477.425589330007 3031.2113079553314 2891.828146237112 2799.298466461731 2135.158149349184 2840.375213138736 2845.12458732384 3003.081578089405 0.933360435523901 0.9978164104993472 0.8274645287888459 0.8249611357231839 1.0093669549542583 0.9629535765315195 0.9321419993667561 0.710989060346338 0.9458201981132378 0.9474016983361274 1.0 11.552227950601596 -9.17512885774137 3.5767421140941718 0.9793722345235849 0.901767592314377 0.09994263144233317 0.08351482556070368 0.3066750333278997 8.146735746198507 0.016090969529921877 0.01542503220721613 6.681456453911397e-10 9.17512885774137 -0.07760464220920793 YSPPAIS(ph)PLVSEK ddPTM_A549_PD325901_60min_R1 2 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 YSPPAIS(0.992)PLVS(0.008)EK;YSPPAIS(1)PLVSEK 150.12 8.262299999999999e-13 46983000.0 5326.299999999999 5268.299999999999 5503.3 5404.0 6227.700000000001 5097.4 6063.2 5794.9 5683.9 5603.0 6531.0 True False 5867.0220549851765 5712.27813010046 5876.787032031285 5737.792806625534 5790.287836398657 5055.88846443758 6293.938393910347 5679.316173488894 5445.025449294685 5249.225623786036 5727.728403420074 1.0243191788706199 0.9973025478459508 1.0260240392198428 1.0017571369479479 1.0109222066013515 0.8827039461959593 1.098854196744417 0.9915477434470753 0.9506430936989637 0.9164585423868352 1.0 12.483747369385638 -7.067765365999551 24.999302739168517 0.9802984498670774 1.0115163818943715 0.11321863869722548 0.051980314602404806 347.23592950345807 128097.74102003481 0.006935342355710815 0.012012372231266935 8.555288001035222e-08 7.067765365999551 0.03121793202729417 YSPPRDDDKVDNQAKS(ph)PTTTQSPK ddPTM_A549_PD325901_60min_R1 1 YSPPRDDDKVDNQAKSPTTTQSPK 24 3 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 Y(0.001)S(0.001)PPRDDDKVDNQAKS(0.916)PT(0.036)T(0.036)T(0.011)QS(0.001)PK 57.347 0.0007742999999999999 4870100.0 2802.1 2242.2 2514.5 2463.4 3005.1 3057.8 2648.6 2894.1 3355.8 2978.3 3068.3 True False 3086.567129203008 2431.1580630015856 2685.1490909168424 2615.558623212681 2794.032143032195 3032.898290610358 2749.3939223695324 2836.3749051224722 3214.7673961088517 2790.249629720144 2690.918551556242 1.147031049088405 0.9034677253964343 0.9978559512193101 0.9719947196841101 1.0383191053539391 1.1270866183803068 1.0217306357264035 1.054054535943538 1.1946728726700595 1.036913446565098 1.0 11.393883008957326 -7.012904385957095 5.71075228053674 1.0872104006480483 0.9978382447093302 0.13425406961792485 0.07416753248946767 0.2210169328819528 25.50960036415508 0.012622999198129828 0.02299381790085425 9.707236577275133e-08 7.012904385957095 -0.08937215593871806 YSPS(ph)QNS(ph)PIHHIPSRR ddPTM_A549_MK2206_60min_R1 3 YSPSQNSPIHHIPSRR 16 1 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8-4;E9PJA7 Q9NYF8-2;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.001)S(0.315)PS(0.684)QNS(1)PIHHIPSRR;Y(0.021)S(0.39)PS(0.589)QNS(1)PIHHIPSRR;Y(0.001)S(0.494)PS(0.506)QNS(1)PIHHIPSRR 96.48700000000001 1.7133000000000002e-06 28256900.0 2910.92 3357.3 2980.94 3156.06 4456.4 2886.38 3377.1400000000003 3473.02 5056.9 4748.2 5187.6 True False 3402.212130838847 3528.172229812276 3403.6821160588474 3929.294841680916 3800.869463357382 3191.81481577602 3990.7226235917797 3965.331220677678 3911.520224209924 3675.5783222318814 3899.3757495235745 0.8725017411452407 0.9048043729161899 0.8728787207733723 1.0076727902308458 0.9747379343531517 0.8185450751100342 1.0234260250706453 1.0169143666552685 1.0031144663829417 0.9426068576953538 1.0 11.929027466290442 -7.8051471526448974 24.999986889112776 1.0044090294913717 0.9142504368031388 0.4162218220497933 0.05174104351137078 90.86339541206539 51971.73121463056 0.007375537265355286 0.01019080041510092 1.566220295440696e-08 7.8051471526448974 -0.0901585926882329 YSPT(ph)SPK ddPTM_A549_MK2206_60min_R1 3 YSPTSPK 7 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.829)S(0.17)PK;YS(0.002)PT(0.63)S(0.368)PK;YS(0.001)PT(0.5)S(0.5)PK 105.36 0.010421 429508000.0 21303.1 23815.6 22468.5 20998.6 30208.7 23164.3 22895.199999999997 22401.3 33397.0 30469.0 32362.0 True False 24898.542469210108 25027.712315347835 25654.87115630244 26143.25794266297 25765.04024722291 25615.530850782132 27054.96147973093 25576.752876104034 25832.6328240501 23586.031738360485 24325.622254237405 1.0235521298894175 1.0288621624463534 1.0546439835401737 1.0747210356811712 1.059172915617185 1.053026746163504 1.1122001812314621 1.0514326255990714 1.061951573286072 0.9695962344499497 1.0 14.570189089452873 -10.607677753469792 0.8525201602651148 0.9993841707089323 1.0586167159058322 0.5503748119180614 0.024357191928438042 0.438766349574398 0.5601328612667281 0.01635057593664651 0.004281271280929965 2.4678698175867345e-11 10.607677753469792 0.05923254519689991 YSPT(ph)SPK ddPTM_A549_PD325901_60min_R1 1 YSPTSPK 7 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YS(0.003)PT(0.717)S(0.28)PK 94.85 0.012685 350080000.0 5793.5 5752.9 5154.8 6100.9 6761.4 5373.9 6150.7 5964.3 5665.8 6077.9 7038.2 True False 6381.651855050719 6237.717072804307 5504.635726330538 6477.7387368507925 6286.502589563709 5330.136740110869 6384.7682542921875 5845.337357597168 5427.6861293502425 5694.140356739096 6172.546018825776 1.0338767561371252 1.010558212734221 0.8917933879377871 1.0494435711121801 1.018461842226915 0.8635232080659059 1.03438163681877 0.9469896765077738 0.8793269605113077 0.9224945977514659 1.0 12.591649971944967 YSPT(ph)SPTYSPTS(ph)PK ddPTM_A549_MK2206_60min_R1 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YSPT(0.616)S(0.379)PT(0.006)YSPT(0.381)S(0.619)PK 173.26 1.6972999999999998e-22 23871000.0 10544.0 10771.0 10121.0 8743.2 15910.0 10591.0 9925.3 10142.0 14755.0 16012.0 17281.0 True False 12323.569423950094 11319.197893339295 11556.309988336421 10885.284392497168 13569.660075849562 11711.732590263182 11728.598534835837 11579.659558572363 11413.016058893292 12394.878079183041 12989.650768663145 0.9487221514592264 0.8714012481880012 0.8896551719631614 0.8379966933951256 1.0446516474935308 0.9016202820877314 0.9029186961000114 0.8914527237720422 0.8786237799730997 0.9542118029135193 1.0 13.66507502349224 -10.852968555503045 1.0644107714673305 1.0007754935870934 0.90525821766039 0.19322159533601024 0.05216152252641489 0.4967981152987145 0.986040848260034 0.03578852529825365 0.008445430942276962 1.402915277043369e-11 10.852968555503045 -0.09551727592670334 YSPT(ph)SPTYSPTTPK ddPTM_A549_PD325901_60min_R1 1 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.499)S(0.499)PT(0.001)YSPTTPK 232.53 1.3188999999999998e-47 80066000.0 18051.0 18394.0 18650.0 18668.0 20742.0 18180.0 18835.0 18902.0 19675.0 20510.0 22766.0 True False 19883.52423155614 19944.126933748616 19915.701151560595 19821.0799618959 19285.153476015388 18031.94810755979 19551.776231907483 18524.984781667863 18848.12817165553 19214.995099741496 19965.92632556445 0.9958728639651043 0.9989081702766817 0.9974844556077748 0.9927453221399956 0.9659032674743772 0.9031360635880747 0.9792571560716075 0.9278299678962754 0.9440147110791606 0.9623893620772577 1.0 14.285252387372958 -6.742097426934017 5.132769110530105 0.9640071800533906 0.9969334732714734 0.3538463277620095 0.025143074031890342 0.2366636637090808 16.72706817237196 0.004434951292256806 0.009105530838427214 1.8109337933778336e-07 6.742097426934017 0.032926293218082825 YSPTS(ph)PK ddPTM_A549_PD325901_60min_R1 2 YSPTSPK 7 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YS(0.001)PT(0.142)S(0.857)PK;Y(0.007)S(0.014)PT(0.093)S(0.886)PK 109.88 0.0085529 415168500.0 12749.9 11938.1 12499.4 13037.7 13805.6 12529.2 11916.6 13400.6 14649.2 13714.2 14783.5 True False 14044.26046201971 12944.165583765589 13347.684448998201 13843.009118234959 12835.942282734453 12427.166349243014 12370.092734013733 13133.314520432665 14033.545067965255 12848.283071519982 12965.223220327767 1.0832255043630992 0.9983758369443911 1.0294990083989286 1.0677031072269498 0.9900286377337014 0.9584999917131276 0.9540979375209717 1.0129647825763117 1.0823990323562265 0.9909804754750047 1.0 13.662359424621307 -11.46877756402345 2.4134295980574336 0.9995313126831482 1.0300046474329634 0.0 0.043552468199263915 0.9118805608760806 9.632584724526156 0.041650585885197024 0.007234792373365632 3.397992656569233e-12 11.46877756402345 0.030473334749815173 YSPTS(ph)PKYS(ph)PTSPK ddPTM_A549_MK2206_60min_R1 1 YSPTSPKYSPTSPK 14 1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 Y(0.075)S(0.283)PT(0.33)S(0.357)PKY(0.022)S(0.761)PT(0.089)S(0.083)PK 49.606 0.0079756 3826300.0 1686.6 1952.1 1740.4 1656.2 2385.7 1735.8 1576.8 1943.6 2289.2 2571.0 2061.3 True False 1971.2568465889829 2051.4535519067535 1987.2148901986675 2061.9690743496444 2034.7666903176807 1919.4812038692116 1863.2841495702048 2219.1112520253655 1770.6998551012198 1990.209314362952 1549.4223210141388 1.2722527743751244 1.3240118746734084 1.2825521249093543 1.3307986120917827 1.313242143682215 1.2388366798619883 1.2025669982284979 1.4322184609893172 1.142812925234128 1.2844847317420252 1.0 10.597514713095844 -9.308285179778528 1.0266830231349684 1.0307751444881896 1.29760813945224 0.12530897692453735 0.10081703953989281 0.15692979350566524 0.34765117298698606 0.017217908594858507 0.013864556794627442 4.917165436306272e-10 9.308285179778528 0.26683299496405044 YSPTS(ph)PKYS(ph)PTSPK ddPTM_A549_PD325901_60min_R1 2 YSPTSPKYSPTSPK 14 1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 Y(0.006)S(0.056)PT(0.44)S(0.499)PKY(0.003)S(0.827)PT(0.089)S(0.08)PK;Y(0.017)S(0.064)PT(0.435)S(0.482)PKY(0.012)S(0.754)PT(0.112)S(0.123)PK 62.765 0.0017247 12476500.0 3753.0 3877.5 3946.8999999999996 3836.8 4703.1 4644.8 3758.3 4310.3 4695.5 4490.0 4878.700000000001 True False 4134.001797187427 4204.270533087435 4214.760368637778 4073.7904219949746 4372.77048081419 4606.974288778531 3901.3241631206715 4224.327685135063 4498.164464041097 4206.500633731807 4278.650828627393 0.9661928403990914 0.9826159463533931 0.9850676153421682 0.9521203260472324 1.021997507148063 1.07673527784843 0.9118117648249953 0.9873036745300955 1.051304405104757 0.9831371622071036 1.0 12.062940233228069 -6.6723727600671765 0.5123494250983105 1.0198826426675056 0.9633403753706393 0.0 0.04328019090598451 2.2420372747255857 0.8634868980761684 0.009925257442707535 0.05935924525203393 2.1263132228577878e-07 6.6723727600671765 -0.05654226729686629 YSPTS(ph)PTYS(ph)PTSPK ddPTM_A549_PD325901_60min_R1 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YS(0.026)PT(0.022)S(0.938)PT(0.097)Y(0.003)S(0.774)PT(0.115)S(0.024)PK 113.53 5.6e-06 37613000.0 4874.4 4594.5 5238.7 5012.1 5736.7 4389.4 4639.8 4909.6 5284.5 5977.4 5304.9 True False 5369.245499656377 4981.694639399152 5594.229684862227 5321.6860336950085 5333.773982540613 4353.654181700933 4816.370127995983 4811.674176493308 5062.41084234377 5599.9859438905305 4652.430930531797 1.1540731243145281 1.070772401306712 1.2024315392088536 1.1438506262975758 1.1464488268998194 0.9357805084498672 1.0352373199972358 1.0342279656246953 1.0881216546647605 1.2036687975613694 1.0 12.183769017016601 -7.213087953820613 24.987130292580712 1.0348206654600314 1.1427658371812421 0.3079231204578041 0.06826305695152211 239.4870804207233 123762.51402189942 0.007336032280312549 0.01270635260946246 6.122263903723044e-08 7.213087953820613 0.10794517172121076 YSPTS(ph)PTYSPT(ph)SPK ddPTM_A549_MK2206_60min_R1 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YS(0.004)PT(0.418)S(0.578)PT(0.001)YS(0.003)PT(0.579)S(0.418)PK 118.51 4.4698e-06 22157000.0 2918.2 3322.7 2791.0 2393.7 4378.4 3890.9 3503.5 2971.5 5709.1 5356.9 4967.2 True False 3410.7208168599363 3491.811237600824 3186.805767952471 2980.1566074572775 3734.343160031409 4302.632455429611 4140.040599961449 3392.71922483709 4415.997965559311 4146.772569471369 3733.7071522541264 0.9134944648245389 0.9352129385650226 0.8535232245058431 0.7981763126918209 1.0001703421696848 1.1523754488436542 1.108828419353138 0.9086730925827502 1.1827381702641755 1.1106314449347923 1.0 11.866393061032051 -6.966876684729863 5.93676499109559 1.0795012882177353 0.8789332768024434 0.6011847666843884 0.07682394956891386 0.10964481639216755 10.95013664121344 0.012879368648590968 0.024327272452553714 1.079253126071697e-07 6.966876684729863 -0.2005680114152919 YSPTS(ph)PTYSPT(ph)TPK ddPTM_A549_MK2206_60min_R1 1 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YS(0.013)PT(0.395)S(0.513)PT(0.081)Y(0.013)S(0.102)PT(0.757)T(0.126)PK 64.374 0.0011815 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YSPTS(ph)PTYSPTS(ph)PK ddPTM_A549_PD325901_60min_R1 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YS(0.004)PT(0.068)S(0.918)PT(0.01)YS(0.002)PT(0.322)S(0.676)PK 164.7 1.6535999999999998e-19 32542000.0 7513.7 7984.7 7380.8 8213.4 8793.8 9101.3 7180.6 8992.9 9056.4 9063.2 10060.0 True False 8276.485292706406 8657.598691307081 7881.705472355949 8720.723064015194 8176.1538249630685 9027.182030326396 7453.861662375087 8813.52955470643 8675.791002479347 8490.94800526461 8822.683775594238 0.9380915720453731 0.9812885638331702 0.8933455706707667 0.9884433451121649 0.926719582490349 1.0231786902867188 0.844851957971603 0.9989624221925385 0.9833505567182139 0.9623996757939697 1.0 13.107001861169165 YSPTS(ph)PTYSPTSPK ddPTM_A549_PD325901_60min_R1 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.061)S(0.923)PT(0.016)YSPTSPK;YSPT(0.004)S(0.967)PT(0.03)YSPTSPK 266.89 1.3875999999999996e-83 43107000.0 9284.5 9498.1 10664.8 9583.1 10977.7 9696.8 10244.1 9552.9 10620.7 10290.0 12052.900000000001 True False 10227.055605112346 10298.53822058485 11388.577460652188 10175.026322200803 10206.664223009066 9617.83247576379 10633.94483128661 9362.35991539493 10174.34891347913 9640.287643897613 10570.4697096282 0.9675119352356639 0.9742744176452576 1.0773955910661952 0.9625897998584487 0.9655828457378995 0.9098774926721853 1.0060049480677848 0.8857089772337314 0.9625257148423348 0.9120018228817852 1.0 13.367751865323504 -5.289151812217628 7.416571190090997 0.9762082767190358 0.9674746420334546 0.0 0.05125148565976443 1.6310152177842043 387.594564171897 0.006334281183595558 0.039487488431342546 5.138639936037437e-06 5.289151812217628 -0.008733634685581193 YSPTS(ph)PTYSPTTPK ddPTM_A549_MK2206_60min_R1 2 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.033)S(0.863)PT(0.104)YSPTTPK;YSPT(0.011)S(0.929)PT(0.06)YSPTTPK 174.72 9.005500000000001e-23 153370000.0 7275.1 8670.7 7585.1 7447.5 11708.4 8480.900000000001 8754.0 8615.5 12410.4 13349.2 12257.3 True False 8502.95902088196 9112.00159444593 8660.781236293906 9272.137834330984 9986.109870023689 9378.3432088342 10344.488486388615 9836.773508862181 9599.464215336438 10333.606448577952 9213.474125729686 0.9228830411686368 0.9889865071634182 0.9400125422947331 1.0063671648501702 1.0838593275186315 1.0178943448317825 1.1227565568888331 1.0676508529385087 1.0418940873268239 1.121575456506701 1.0 13.169529540749116 -6.440362460957042 4.622862879625781 1.0356879201123441 0.9553837306897563 0.4935988422698252 0.04515226950606002 0.16426320751819642 6.233705524502955 0.005843365420937858 0.013828549252060384 3.6277515725977646e-07 6.440362460957042 -0.08030418942258777 YSPTS(ph)PTYSPTTPK ddPTM_A549_PD325901_60min_R1 3 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.056)S(0.926)PT(0.014)YS(0.004)PTTPK;YSPT(0.002)S(0.997)PT(0.001)YSPTTPK;YSPT(0.015)S(0.924)PT(0.06)YS(0.001)PTTPK 276.28 4.642399999999998e-99 117769000.0 22653.0 21256.5 24252.7 23271.699999999997 25496.4 25698.300000000003 24916.4 26754.2 26900.0 26919.8 28209.9 True False 24952.715883742803 23047.859854693226 25898.634065332644 24709.140055134598 23705.620821804954 25489.02156504422 25864.607236777236 26220.566492736143 25769.48654726983 25220.079233838205 24740.261137289835 1.008587409214236 0.9315932328601927 1.0468213703006088 0.9987420875639695 0.9581798951214214 1.0302648554758305 1.0454460077542482 1.0598338613821303 1.041601234694677 1.0193942211800329 1.0 14.594573107813803 -7.2945274379647795 24.815860211121702 1.0262653414402805 0.9893849212942621 0.3223163264809068 0.03097195375986998 665.5500936476104 499157.255397082 0.004900449008480526 0.007834205928438509 5.075426723587824e-08 7.2945274379647795 -0.03688042014601833 YSPTSPKYS(ph)PTSPK ddPTM_A549_MK2206_60min_R1 2 YSPTSPKYSPTSPK 14 1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.002)S(0.002)PKY(0.002)S(0.463)PT(0.463)S(0.068)PK;Y(0.001)S(0.004)PT(0.031)S(0.031)PKY(0.023)S(0.766)PT(0.127)S(0.018)PK 64.52 0.0014245999999999998 14712700.0 2887.9 4382.5 4676.7 3498.1 5376.6 4102.1 3174.1000000000004 3896.5 5753.5 5613.1 5341.700000000001 True False 3375.3069176238137 4605.55053082903 5339.926383010863 4355.134657035675 4585.70926233895 4536.181499246396 3750.792883784111 4448.840807530783 4450.341436451544 4345.096811532743 4015.2084665799393 0.8406305539843666 1.1470265041436143 1.3299250655245025 1.0846596617050066 1.1420849752901996 1.1297499337836896 0.9341464870388034 1.107997466273576 1.108371202514982 1.082159705454545 1.0 11.971259177982132 YSPTSPKYS(ph)PTSPK ddPTM_A549_PD325901_60min_R1 1 YSPTSPKYSPTSPK 14 1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.002)S(0.002)PKYS(0.463)PT(0.463)S(0.068)PK 78.661 0.00017746 11555000.0 3226.7 3008.5 3283.5 3190.6 3849.0 4013.9 4234.5 3959.4 3965.6 3829.6 4374.6 True False 3554.2722086290055 3262.036853331668 3506.3380552895023 3387.676115621654 3578.65951832915 3981.2121292043053 4395.646214707309 3880.426660910788 3798.9396227454727 3587.798402436373 3836.5519328742084 0.9264235883720388 0.8502522344035797 0.9139295170866301 0.8830001978061919 0.9327801580540956 1.0377057834381307 1.1457283236654239 1.0114359791824088 0.9901963245156549 0.9351622147203732 1.0 11.905594568506489 -7.075164859793075 4.019607655328107 1.0115664440310914 0.8928331819763559 0.5769043333548666 0.05109249501410558 0.13258013998606016 4.071949133567555 0.007381707208211607 0.013340893660318749 8.41075805549025e-08 7.075164859793075 -0.11873326205473556 YSPTSPTYS(ph)PTSPK ddPTM_A549_MK2206_60min_R1 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPTYS(0.642)PT(0.331)S(0.027)PK;YSPTSPTYS(0.698)PT(0.256)S(0.046)PK 152.99 5.1375e-14 91759000.0 2126.05 2025.7400000000002 2424.0 2248.6000000000004 2981.8 2436.5 2305.4 2315.8 3616.6000000000004 3114.3 3669.0 True False 2484.8752630680115 2128.8415133648823 2767.7596494148315 2799.507100943489 2543.181169966574 2694.3288127821975 2724.2613384190427 2644.071741840058 2797.4458745234456 2410.7774670247145 2757.886040751408 0.9010072303027384 0.7719106162866912 1.0035801365674752 1.0150916533812764 0.922148751756858 0.9769543675735441 0.9878077984965601 0.9587313263747692 1.0143442597654466 0.874139624118725 1.0 11.429347128809288 -5.774288830634191 24.998308238403933 0.9951978889375696 0.8364589284269219 0.45385420723453296 0.052998440729240454 70.54290996536145 137240.4841135812 0.005065680939069096 0.01589429374463535 1.6815553587595143e-06 5.774288830634191 -0.15873896051064762 YSPTSPTYS(ph)PTSPK ddPTM_A549_PD325901_60min_R1 3 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPT(0.005)YS(0.986)PT(0.01)SPK;YSPTSPT(0.012)YS(0.926)PT(0.062)SPK;YSPTS(0.009)PT(0.093)YS(0.704)PT(0.19)S(0.003)PK 258.09 5.0391e-70 74055000.0 14913.800000000001 15878.400000000001 15774.6 15088.2 17732.1 18324.899999999998 16765.1 17179.0 17773.9 17532.6 18981.4 True False 16427.837997040726 17216.52849324964 16845.159216375752 16020.163846211582 16486.658468424088 18175.66809000122 17403.105054714724 16836.351368335214 17026.924793402213 16425.58864386777 16646.808133008388 0.9868461188344285 1.034223999921737 1.011915262180145 0.962356490097687 0.9903795572517746 1.0918410271072512 1.0454319480145087 1.0113861608671386 1.0228342068555536 0.9867109966443375 1.0 14.022957960322039 YSPTSPTYS(ph)PTTPK ddPTM_A549_MK2206_60min_R1 1 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPTYS(0.873)PT(0.118)T(0.009)PK 144.27 4.9587e-13 5026400.0 1146.5 1089.7 1327.0 1241.0 1765.7 1202.3 1574.2 1680.5 1895.9 2225.7 2530.0 True False 1340.0011707661972 1145.1610755149793 1515.1885539494547 1545.0450557106071 1505.9678690086464 1329.5265879778517 1860.2117632251486 1918.7160213154073 1466.4816771301792 1722.9128241842168 1901.73117555221 0.7046217614732524 0.6021676934346182 0.7967417127236639 0.8124413563667687 0.7918931384039362 0.6991138416773307 0.9781675702324197 1.0089312548385105 0.771129850518622 0.9059707525086613 1.0 10.893097609142417 -2.4108395242563763 0.08103996088858341 1.1156050503547053 1.3816075129071065e-14 0.47851879468950176 0.09222648862990995 106.84682913935622 0.6620303226958527 1.4334072021643713 13.399179594765867 0.0038829381756730085 2.4108395242563763 -1.1156050503546915 YSPTSPTYSPT(ph)SPK ddPTM_A549_MK2206_60min_R1 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTS(0.005)PT(0.012)YS(0.249)PT(0.726)S(0.008)PK;YSPTSPTYS(0.018)PT(0.971)S(0.011)PK 179.67 1.8812000000000002e-23 108598000.0 3382.3999999999996 3342.7 3468.1 2998.5 4486.3 3357.5 3244.8 3848.3 5566.0 4969.6 4326.799999999999 True False 3953.2664282595606 3512.829152173918 3959.928729428866 3733.1326346077794 3826.371212965672 3712.7884214718756 3834.338158628486 4393.808309924478 4305.309887075568 3846.963908462906 3252.336146394983 1.2155159400240705 1.0800941212880701 1.217564406378537 1.147831117870682 1.1764993041100538 1.141575856353986 1.1789489111937634 1.3509699219727787 1.3237591974764793 1.1828309668196604 1.0 11.667260660056193 -11.017406885190265 1.340298381214513 1.0014031344626617 1.2134128350444604 0.06930201467144548 0.09076478756291792 0.31470381029298167 1.0176790381628091 0.05919624835153106 0.013777933325527 9.607117774970448e-12 11.017406885190265 0.2120097005817987 YSPTSPTYSPT(ph)SPK ddPTM_A549_PD325901_60min_R1 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPTYS(0.091)PT(0.898)S(0.01)PK 192.65 8.490799999999998e-27 36479000.0 3034.4 1804.0 2759.0 2884.1 2886.5 2930.7 2595.2 2459.7 2753.0 3215.1 2905.1 True False 3342.4500541927837 1956.0294111385497 2946.242331214783 3062.244306733658 2683.7621978844063 2906.8333508704864 2693.961756147932 2410.639353902677 2637.3009838153835 3012.098037307602 2547.7911169462045 1.3119011334803072 0.7677353917000294 1.156390848377776 1.2019212589154795 1.0533682216072633 1.1409229475431375 1.0573715161456911 0.9461683643799189 1.035132341216601 1.1822390058875463 1.0 11.315031286393303 -8.003772605086786 23.99500125081316 1.0112958825510383 1.0947679067777523 0.029267186167970194 0.13730505929145936 176.34399396807828 1121618.2121729283 0.01832377202234225 0.025008061783547166 9.91350876515357e-09 8.003772605086786 0.08347202422671396 YSPTSPTYSPT(ph)TPK ddPTM_A549_MK2206_60min_R1 3 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPTYSPT(0.5)T(0.5)PK;YSPTSPT(0.018)YS(0.398)PT(0.541)T(0.043)PK;YSPTSPTYS(0.004)PT(0.518)T(0.478)PK 124.3 6.9654e-15 5264200.0 1461.7 1618.6 1537.1 1704.4 2024.1 1706.4 1604.4 1285.2 2354.6 2071.0 3053.8 True False 1708.399224866071 1700.979826400426 1755.0838931994783 2121.978076513423 1726.3575713090565 1886.9701153833525 1895.8987123100164 1467.3810357599289 1821.2868595235607 1603.1596616280333 2295.4571794076455 0.7442522736612025 0.7410200641770945 0.7645901256377985 0.9244250319934132 0.7520757027384636 0.8220454436315361 0.8259351249580978 0.6392543711656578 0.793430988764318 0.6984053878285531 1.0 11.164565804217292 -10.422565654839213 0.81611437147762 0.997922422661184 0.7804119719230693 0.0 0.11012404063846584 0.33564025189559193 0.41134511061487217 0.042398102939155045 0.013175765576313555 3.7794999606928714e-11 10.422565654839213 -0.2175104507381147 YSPTSPTYSPTT(ph)PK ddPTM_A549_PD325901_60min_R1 1 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPTYS(0.001)PT(0.147)T(0.852)PK 114.72 4.4636e-06 5765500.0 2559.8 2753.5 2386.7 2622.9 3150.6 2886.5 2374.7 3395.9 3138.8 2709.1 3129.3 True False 2819.6690115748374 2985.547108409092 2548.675814393012 2784.9105759618997 2929.3127249799477 2862.9933010160235 2465.070507985702 3328.166110467987 3006.887151471023 2538.046963662101 2744.4159382671014 1.0274204329811802 1.0878624725865158 0.9286769468342014 1.014755284405019 1.0673719985861891 1.0432067752907 0.8982131584406314 1.2127047012303396 1.0956382775453684 0.9248040460166882 1.0 11.422283434758853 -8.218368845771096 24.9998678188866 1.0589903145877284 1.0132460017029195 0.07199296101620745 0.08336098736908613 1032.2688998126296 599171.1978459582 0.012309916670905925 0.01589200619783725 6.048269777479874e-09 8.218368845771096 -0.04574431288480896 YSQANMDAPPLS(ph)PYPFVR ddPTM_A549_MK2206_60min_R1 1 YSQANMDAPPLSPYPFVR 18 0 Q08999 Q08999 RBL2 Retinoblastoma-like protein 2 1 Y(0.048)S(0.055)QANMDAPPLS(0.875)PY(0.022)PFVR 50.07899999999999 0.0064408 1371200.0 536.93 599.04 595.32 434.82 717.77 679.45 392.32 484.66 712.37 765.49 912.46 True False 627.5506573218446 629.528577293285 679.7453277597509 541.3509195198118 612.1869838241694 751.3489480175921 463.599465727665 553.3620392090004 551.0193324211324 592.5652773441054 685.8709993851265 0.9149689342229584 0.9178527417803761 0.9910687700298347 0.7892897060892282 0.892568696406447 1.0954668570200017 0.6759280770629976 0.8068019200477662 0.8033862532679079 0.8639602459869737 1.0 9.421793445402884 YSQANMDAPPLS(ph)PYPFVR ddPTM_A549_PD325901_60min_R1 2 YSQANMDAPPLSPYPFVR 18 0 Q08999 Q08999 RBL2 Retinoblastoma-like protein 2 1 YSQANMDAPPLS(0.974)PY(0.026)PFVR;Y(0.009)S(0.009)QANMDAPPLS(0.967)PY(0.015)PFVR 55.54600000000001 0.0035287 5645600.0 2468.2 2957.9 2387.5 2275.38 2714.5 3274.5 3140.2 2660.6 3510.1000000000004 3347.2 3062.3999999999996 True False 2718.769847007195 3207.1726137509518 2549.5301072038023 2415.9250548370824 2523.8428845166195 3247.833557657016 3259.702029383373 2607.532245799678 3362.5827037015547 3135.857220763273 2685.74421415306 1.012296641161917 1.194146708703726 0.9492825466284353 0.8995365389249981 0.9397182617826115 1.209286253151702 1.2137053157205846 0.9708788469351517 1.2520115229074162 1.1675934008303 1.0 11.391106196074938 -7.2543041322214314 24.89006762662116 1.12296672557286 1.0015504401694162 0.28243735880861365 0.10734438747607983 737.8930464839578 2574008.1023176783 0.01856736237479943 0.031718520760736536 5.567956937377422e-08 7.2543041322214314 -0.12141628540344374 YSQGDDDGSSSSGGSSVAGSQSTLFKDS(ph)PLR ddPTM_A549_MK2206_60min_R1 2 YSQGDDDGSSSSGGSSVAGSQSTLFKDSPLR 31 1 B0QY68;B0QY66;B0QY69;B0QY65;B0QY67;B0QY63;B0QY64;Q9UH99-3;Q9UH99;Q9UH99-2 B0QY68 SUN2 SUN domain-containing protein 2 1 YSQGDDDGSSSSGGSSVAGS(0.006)QS(0.023)T(0.023)LFKDS(0.948)PLR;YSQGDDDGSSSSGGS(0.003)S(0.003)VAGS(0.053)QS(0.043)T(0.035)LFKDS(0.862)PLR 176.08 1.8631e-58 85314000.0 3467.9 3418.0 3125.7 3195.0 4576.6 3298.8999999999996 3221.0 3184.4 4398.4 4425.6 3870.5 True False 4053.1967379852554 3591.9616005416165 3568.971260798651 3977.7751434290008 3903.388202585358 3647.9874083674067 3806.2140067006753 3635.798451815998 3402.169422801506 3425.8538862873106 2909.348029634321 1.3931632436888983 1.234627677388289 1.226725446541794 1.3672393618473249 1.3416711107869688 1.2538848467798904 1.3082704330767476 1.2496952632624654 1.1693923821238836 1.1775331969196927 1.0 11.506480173260679 -9.448950491204489 0.5405906311565618 1.0051924539844266 1.3116971222008937 0.5493305604881018 0.07041198208175004 0.2204502059101719 0.1454968868447544 0.02696610711804632 0.01516283392920837 3.5567186221523614e-10 9.448950491204489 0.30650466821646716 YSQGDDDGSSSSGGSSVAGSQSTLFKDS(ph)PLR ddPTM_A549_PD325901_60min_R1 2 YSQGDDDGSSSSGGSSVAGSQSTLFKDSPLR 31 1 B0QY68;B0QY66;B0QY69;B0QY65;B0QY67;B0QY63;B0QY64;Q9UH99-3;Q9UH99;Q9UH99-2 B0QY68 SUN2 SUN domain-containing protein 2 1 YSQGDDDGSSSSGGSSVAGSQSTLFKDS(1)PLR;YSQGDDDGSSSSGGSSVAGS(0.007)QS(0.114)T(0.085)LFKDS(0.794)PLR 305.36 1.7047999999999992e-204 153340000.0 3964.4 4214.8 4905.6 5339.299999999999 5447.9 5117.9 5286.299999999999 4925.9 5157.2 5347.2 5287.2 True False 4366.8629695629725 4569.995987841886 5238.523515769206 5669.096434569891 5065.258298234699 5076.2215192343365 5487.473039274355 4827.649060206203 4940.460818646097 5009.576879441141 4636.90791832225 0.9417618478701671 0.9855697090261446 1.1297449955971166 1.2226027633995185 1.0923784529384049 1.094742791672913 1.1834336881246201 1.0411354172314398 1.0654645090372379 1.0803701448644965 1.0 12.178947362010952 -9.785616780410953 0.7686028038285247 1.0071617195644262 1.0915900695870555 0.01882133045065648 0.07893989284716166 0.8407682623146486 1.0397106081821892 0.032765281747271856 0.01720158314685469 1.6382614787277276e-10 9.785616780410953 0.08442835002262927 YSQKEDKYEEEIK ddPTM_A549_PD325901_60min_R1 2 YSQKEDKYEEEIK 13 2 P06753-2;P06753-3;P06753-6;J3KN67;P06753-5;A0A2R2Y2Q3;P06753-4;P06753;P06753-7;A0A494C034 P06753-2 TPM3 Tropomyosin alpha-3 chain 0 ; 82.90799999999999 0.00016482 17395600.0 5110.8 5194.2 6016.6 6270.5 8670.8 6831.9 6300.1 7473.8 6812.1 7121.8 6901.5 False True 5629.6446536278945 5631.933463046486 6424.92265675493 6657.814543661246 8061.7929206361105 6776.263271509229 6539.853753047004 7324.729195917323 6525.8111267158665 6672.1283325860095 6052.6592522130795 0.9301109510781538 0.9304891004705477 1.061504107373257 1.0999817214601828 1.3319423058035882 1.119551421803825 1.0804926364648377 1.2101671167494068 1.0781725609829738 1.1023465975135522 1.0 12.563353418300675 -5.794094877315565 4.34068615104152 1.0833574966911412 0.9273939363691689 0.35197458590703445 0.08887079286029316 0.20453817467915114 8.510518921193674 0.014254226833676966 0.051759424713412924 1.6065902340010492e-06 5.794094877315565 -0.15596356032197234 YSQSAPGS(ph)PVSAQPVIMAVPPRPSSLVAK ddPTM_A549_PD325901_60min_R1 1 YSQSAPGSPVSAQPVIMAVPPRPSSLVAK 29 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 YSQS(0.036)APGS(0.919)PVS(0.045)AQPVIMAVPPRPSSLVAK 114.7 6.5173000000000006e-21 5951900.0 5390.6 5212.0 4927.8 4566.7 5962.2 5241.6 5257.2 5982.3 5672.8 5874.4 5543.0 True False 5937.849743650021 5651.233531515591 5262.2301412686475 4848.774687271803 5543.435640473384 5198.914147446943 5457.265622850222 5862.978333476442 5434.391943693393 5503.489381468627 4861.246139972053 1.2214665895695949 1.162507177953363 1.0824858461700726 0.9974345152783557 1.1403322277578096 1.0694612035170126 1.122606316511592 1.2060648987237144 1.1179010046433557 1.1321149398742985 1.0 12.24711046876325 -10.465724113629282 0.8696043281835745 1.0021716355199737 1.1207734834051333 0.0 0.07060802020825495 0.5207658425750102 0.7285065440823993 0.03713492128240533 0.011678237722345735 3.421967546020173e-11 10.465724113629282 0.1186018478851596 YSQSAPGSPVS(ph)AQPVIMAVPPRPSSLVAK ddPTM_A549_PD325901_60min_R1 1 YSQSAPGSPVSAQPVIMAVPPRPSSLVAK 29 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 YSQSAPGS(0.318)PVS(0.682)AQPVIMAVPPRPSSLVAK 82.336 9.3833e-07 7351400.0 1037.5 1489.2 1404.0 1246.8 1471.1 1228.6 1498.7 1495.2 1568.4 1491.1 1567.0 True False 1142.8262362328674 1614.7001103478551 1499.2838829378595 1323.8120043117533 1367.7750110194888 1218.594688941031 1555.7338486201083 1465.3770630382905 1502.4856022579186 1396.9516915272823 1374.2689340314275 0.8315884962053086 1.1749520565899143 1.090968329277225 0.9632845300725393 0.9952746344975661 0.8867221391422093 1.132044689430876 1.0662957058481972 1.093298091116974 1.0165053265297315 1.0 10.424448640948855 -7.793334108206299 24.99926630478844 1.0531972923421682 1.0024019800052384 0.11828610612053092 0.09240741624633675 453.07584938342114 355121.7031297141 0.014384624604078265 0.019876068520919467 1.6094070217383592e-08 7.793334108206299 -0.0507953123369298 YSQVLANGLDNK ddPTM_A549_PD325901_60min_R1 2 YSQVLANGLDNK 12 0 P62269;J3JS69 P62269 RPS18 40S ribosomal protein S18 0 ; 182.71 6.607e-46 3925700.0 4635.0 5752.6 5868.3 5265.8 6102.8 5245.0 5548.4 5974.0 6531.4 5975.5 6807.9 False True 5105.5417878933395 6237.391790751455 6266.55812695459 5591.056506500505 5674.160381517049 5202.286458974207 5759.547398200976 5854.843883487665 6256.907971555324 5598.205910214792 5970.571458833792 0.8551177760948504 1.0446892452016276 1.0495742610504843 0.936435740707571 0.9503546554361749 0.8713213625937153 0.9646559693510419 0.9806170018826419 1.0479579743238616 0.9376331811474989 1.0 12.54365330683385 -8.559713006012073 4.436205259381243 1.0225889174107579 0.957256133729599 0.03370648469515214 0.062476213832473655 0.2453924736970305 11.016716258191899 0.009930556040012544 0.01142485041074838 2.7560493765093317e-09 8.559713006012073 -0.06533278368115891 YSRLS(ph)STDDGYIDLQFKK ddPTM_A549_MK2206_60min_R1 1 YSRLSSTDDGYIDLQFKK 18 2 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 YS(0.136)RLS(0.816)S(0.024)T(0.024)DDGYIDLQFKK 75.646 9.866600000000001e-05 6921600.0 1805.0 2041.2 1649.1 1422.5 1797.9 1528.9 1615.6 1500.5 2200.5 1995.9 2515.9 True False 2109.6398719869057 2145.0883613298834 1882.9671773308553 1771.0125638584504 1533.4312916637282 1690.6871831983167 1909.1336073348689 1713.2004700885263 1702.090263476426 1545.0248037872482 1891.132594692414 1.1155430760951117 1.134287657750817 0.99568226078675 0.9364824914069547 0.8108533986286326 0.8940077432663049 1.0095186412063204 0.905912401328566 0.9000375057007913 0.8169838583098088 1.0 10.885034804480096 -5.889155759348485 3.161863974413718 0.9377619520132802 1.1274753872661192 0.6083796869830327 0.06367144337330762 0.12720483415453226 2.4918903956062226 0.008503239388501995 0.031866793914447376 1.2907562619478663e-06 5.889155759348485 0.189713435252839 YSRS(ph)PAR ddPTM_A549_MK2206_60min_R1 1 YSRSPAR 7 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 Y(0.008)S(0.01)RS(0.982)PAR 43.442 0.024806 39102000.0 600.78 476.56 491.98 540.08 693.9 411.44 436.57 525.66 799.59 501.93 582.55 True False 702.1769763392205 500.8148684476627 561.7501618478167 672.3996242451127 591.8282292037715 454.9783077082318 515.8891179463877 600.1739147662342 618.4841416828519 388.54366439447523 437.88675743792106 1.6035583730544025 1.1437086414257753 1.2828662943237228 1.535555969263214 1.351555440193175 1.0390318957584228 1.1781336365704664 1.3706144444236146 1.4124294265065416 0.8873154024292658 1.0 8.774414010272018 -10.869354868062748 1.0461378826181231 0.9946386978986727 1.320181142870971 0.4401039696007726 0.16168633583388933 0.48653314495499506 0.9196948060905128 0.11955496419073475 0.027065456301340676 1.3509682171435587e-11 10.869354868062748 0.32554244497229845 YSRS(ph)PAR ddPTM_A549_PD325901_60min_R1 2 YSRSPAR 7 1 Q8N2M8;F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8-4 Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein 1 Y(0.001)S(0.002)RS(0.997)PAR;Y(0.002)S(0.006)RS(0.992)PAR 56.729 0.010288 110327000.0 1903.32 2118.2 1969.85 1612.69 1951.16 1895.1799999999998 2005.85 1845.87 2007.2200000000003 2040.7 1727.12 True False 2096.543645249871 2296.7081478235477 2103.535866670328 1712.3021986152721 1814.1172527365804 1879.746282424926 2082.183719393237 1809.0526747929975 1922.8635236955759 1911.8498537319592 1514.6951891157366 1.3841356731804315 1.5162840446891115 1.3887519296198136 1.1304599175593186 1.1976780977271364 1.2410063067027381 1.3746552668519363 1.194334469266456 1.269472259179831 1.2622010470952096 1.0 10.564811785690477 -14.999999999999998 0.10133064576148015 0.03295288724356485 1.508711011409204 0.23156418564906855 0.11907147903773417 56.60002112722773 0.41171564716416065 11.638765041025147 0.6853585241729019 1.000000000000004e-15 14.999999999999998 1.475758124165639 YSRS(ph)PYSR ddPTM_A549_MK2206_60min_R1 1 YSRSPYSR 8 1 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 Y(0.137)S(0.222)RS(0.64)PY(0.001)SR 43.477 0.019221000000000002 6178800.0 1938.9 2117.4 1586.4 1044.2 1359.9 1426.1 1071.9 1438.3 1686.0 2378.6 3164.9 True False 2266.138918446211 2225.166615853368 1811.3753745180218 1300.02904687592 1159.8605114486365 1577.0089554314343 1266.6503551016624 1642.1834296090144 1304.1236919887554 1841.2726079905547 2378.9679832036327 0.9525722642952593 0.935349542979915 0.7614122540979877 0.5464676515424298 0.487547760052959 0.6628962502083606 0.5324369071146263 0.6902923625720978 0.5481888370067762 0.7739795663458272 1.0 11.216120140374624 -10.906319115381951 1.1437037326919615 1.0010571221959979 0.6654131153969819 0.14694137256981687 0.16152003932589337 0.43509507956471605 1.0055879626174733 0.11588505252706643 0.027212897642175538 1.240740288606613e-11 10.906319115381951 -0.33564400679901596 YSS(ph)DDTLDR ddPTM_A549_MK2206_60min_R1 2 YSSDDTLDR 9 0 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 YS(0.111)S(0.864)DDT(0.025)LDR;YS(0.025)S(0.975)DDTLDR 176.48 7.6418e-08 40330000.0 2642.41 2724.46 2479.07 2505.5 3929.8 2179.71 2863.4 2828.8 4319.6 4458.8 4174.5 True False 3088.3842072780685 2863.1233768904635 2830.639403496214 3119.3476124761673 3351.7316257745797 2410.3654654256034 3383.6427155500523 3229.7910628366712 3341.2174969837642 3451.553983228913 3137.856439661146 0.9842337489511088 0.9124456239303445 0.9020933423588658 0.9941014423250742 1.0681596466333336 0.768156705628603 1.0783293565576406 1.0292985434303212 1.0648089105518732 1.0999719233814416 1.0 11.615563633613508 YSS(ph)DDTLDR ddPTM_A549_PD325901_60min_R1 2 YSSDDTLDR 9 0 O95171-2;O95171;O95171-3;F2Z2X8 O95171-2 SCEL Sciellin 1 YS(0.001)S(0.999)DDTLDR;YS(0.009)S(0.991)DDTLDR 205.18 7.304e-17 50088000.0 5662.0 5378.2 5287.1 5338.4 5982.299999999999 5529.200000000001 5822.5 6087.0 5347.9 5414.0 6138.0 True False 6236.802071855902 5831.439788794542 5645.914399915073 5668.140843613943 5562.1238858146135 5484.17202840042 6044.078423694252 5965.590009840878 5123.146360823208 5072.15911604098 5383.064911987815 1.1585968539905318 1.0832936039482302 1.048828964953015 1.0529579219807061 1.0332633874482997 1.01878244421453 1.1227950103730668 1.1082143922425696 0.9517155086527413 0.9422437215545248 1.0 12.39421210694276 -8.76431901402446 24.999974588488172 0.9771989869850711 1.0746706376541721 0.5933727787463088 0.04148117371005623 43.30325101903866 375942.3791560435 0.007421532625826627 0.00807194282445487 1.7206042289032857e-09 8.76431901402446 0.09747165066910102 YSS(ph)DSESPR ddPTM_A549_MK2206_60min_R1 1 YSSDSESPR 9 0 Q9NPE2 Q9NPE2 NGRN Neugrin 1 YS(0.086)S(0.872)DS(0.041)ES(0.001)PR 95.573 0.00091588 3313800.0 667.32 641.53 543.87 637.17 740.44 774.48 564.3 649.54 872.27 915.83 1028.2 True False 779.9473015924106 674.1811368038211 620.9989441118995 793.2766786036478 631.5222568549368 856.4349595417832 666.826005582487 741.6142841328232 674.7022377289627 708.9433669284414 772.8695631236293 1.0091577399427865 0.8723090790107595 0.8034977358948778 1.026404346158414 0.817113633382814 1.1081235442632984 0.862792426302109 0.959559438639963 0.8729833207586626 0.9172872121696398 1.0 9.59408114142371 -11.05172360956623 1.359364805873508 0.9999450585733476 0.9187185520867548 0.0 0.09269112605529244 0.7914827646791422 2.6110713641157384 0.05844738467322706 0.013054118736697337 8.877207889034121e-12 11.05172360956623 -0.0812265064865928 YSS(ph)DSESPR ddPTM_A549_PD325901_60min_R1 1 YSSDSESPR 9 0 Q9NPE2 Q9NPE2 NGRN Neugrin 1 YS(0.09)S(0.888)DS(0.022)ESPR 125.75 4.6860000000000006e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YSS(ph)LVIFPR ddPTM_A549_MK2206_60min_R1 1 YSSLVIFPR 9 0 P46934-3;P46934-2;P46934;H0YA37 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 YS(0.176)S(0.824)LVIFPR 99.815 0.00079537 1219700.0 473.03 431.52 258.31 348.56 517.16 328.61 184.2 424.72 568.75 468.62 438.02 True False 552.865899526851 453.48252482905707 294.94224217835995 433.9572156474528 441.0864490777094 363.38329208633604 217.6667556765801 484.9253606504491 439.9290331071203 362.75841652927517 329.2475452629957 1.679180019657349 1.3773300100592252 0.8958069586905092 1.3180271862036734 1.3396802965543122 1.1036780602147647 0.6611036553141579 1.472829084460148 1.336164959880611 1.1017801704170997 1.0 8.36302887414382 -5.463464098215608 4.082553118831152 1.15450836143932 1.6480451995372012 0.34851655303387874 0.22153813799159058 0.20167403135498493 6.414799525685652 0.03112085659069938 0.1995746256904758 3.439821461476556e-06 5.463464098215608 0.4935368380978813 YSS(ph)LVIFPR ddPTM_A549_PD325901_60min_R1 2 YSSLVIFPR 9 0 P46934-3;P46934-2;P46934;H0YA37 P46934-3 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 YS(0.156)S(0.844)LVIFPR;YS(0.142)S(0.858)LVIFPR 88.49600000000001 0.001117 4427500.0 1063.21 1035.17 1042.62 1178.98 1098.96 1315.48 915.97 1014.99 1276.16 1226.19 1213.31 True False 1171.1462965061664 1122.4074088294303 1113.3784629833845 1251.8029169421475 1021.7728408061837 1304.767167026004 950.8277395880167 994.7452282057483 1222.5274331659427 1148.7681541371057 1064.0805618057896 1.1006180721116472 1.0548143149280518 1.0463291060349174 1.1764174272836871 0.9602401147824673 1.2261920890761873 0.8935674362610496 0.9348401464242743 1.148904957996096 1.0795875757636224 1.0 10.055391666439002 -6.756356625463882 24.99015249376888 1.0534501613954306 1.0882628315159006 0.06007792738937434 0.09611146454466944 493.3159564990889 2425437.186176706 0.014296657110586891 0.029086644297918716 1.752440875655373e-07 6.756356625463882 0.03481267012047007 YSS(ph)PPASTTR ddPTM_A549_MK2206_60min_R1 2 YSSPPASTTR 10 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 Y(0.007)S(0.045)S(0.94)PPAS(0.008)TTR;YS(0.029)S(0.97)PPAS(0.001)TTR 136.86 4.811999999999999e-07 27634000.0 5241.6 5381.1 5184.9 4551.6 6657.299999999999 4960.9 4567.0 4527.9 7256.2 8176.400000000001 8349.8 True False 6126.253935183692 5654.975005463569 5920.196784756995 5666.742204329086 5678.019988871986 5485.859145221092 5396.7647837944705 5169.7436911121895 5612.682285770346 6329.345561243577 6276.314217243421 0.9760910182528058 0.9010025326531936 0.9432601013652191 0.9028773908037286 0.9046742709713779 0.8740574412525989 0.859862109670594 0.8236910250460275 0.894264068288706 1.0084494405736506 1.0 12.615701865825836 -10.509361492944263 0.9618231782891709 0.996407519692674 0.8966892205312978 0.5249061537588504 0.038530151272461864 0.35801424561053596 0.6222040445635697 0.022463272405119902 0.007383205505821072 3.0948421783950816e-11 10.509361492944263 -0.0997182991613762 YSS(ph)PPASTTR ddPTM_A549_PD325901_60min_R1 1 YSSPPASTTR 10 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 YS(0.006)S(0.994)PPASTTR 109.11 0.00022202 17565000.0 4696.4 4522.4 4953.9 4705.6 6543.5 4960.4 5061.1 4166.0 5889.5 5231.0 6182.8 True False 5173.175070693048 4903.518519364182 5290.101444220699 4996.254224807011 6083.907133849518 4920.0041470153765 5253.702930040185 4082.905861836223 5641.984796287942 4900.713767271954 5422.354795998413 0.9540458463748528 0.9043153212664872 0.9756096093388589 0.9214177996050987 1.1220046202692817 0.9073556290794987 0.9688969327343372 0.7529765231978778 1.0405045425009098 0.9037980640603932 1.0 12.40470379947566 YSS(ph)PTAGSAK ddPTM_A549_MK2206_60min_R1 2 YSSPTAGSAK 10 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YS(0.107)S(0.876)PT(0.017)AGSAK;YS(0.055)S(0.937)PT(0.008)AGSAK 157.54 1.3315999999999998e-08 241590000.0 8475.9 10484.0 8609.6 8704.6 10880.1 9104.099999999999 8968.1 9586.2 11714.7 14001.2 12953.400000000001 True False 9906.424704140618 11017.590819215411 9830.570741584952 10837.227390764341 9279.651702781319 10067.489819187524 10597.487685033326 10945.073206506246 9061.339154531828 10838.319195744289 9736.713284347043 1.0174300520963688 1.131551325119898 1.0096395420607482 1.1130272684712315 0.9530579192158707 1.0339720935782555 1.0884050269889411 1.1241034717641105 0.9306363338334137 1.1131394012770421 1.0 13.249219144383467 -8.773096715911691 24.995951675806655 0.9672449345440836 1.0581071129490724 0.0 0.06941549470349555 170.54818809928844 365692.3019829681 0.009446526495100456 0.01009727166900325 1.6861774775545801e-09 8.773096715911691 0.09086217840498889 YSS(ph)PTAGSAK ddPTM_A549_PD325901_60min_R1 4 YSSPTAGSAK 10 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YS(0.02)S(0.947)PT(0.032)AGSAK;YS(0.008)S(0.991)PT(0.001)AGSAK;YS(0.072)S(0.914)PT(0.013)AGS(0.001)AK;YS(0.007)S(0.99)PT(0.003)AGSAK 179.46 2.5926e-11 355324000.0 31220.5 33445.9 34148.5 32042.4 38590.6 35273.1 35423.6 34728.4 36623.5 35767.0 40288.399999999994 True False 34389.98217668264 36264.50337139627 36466.02256161217 34021.58627442968 35880.12938634264 34985.84756835903 36771.66448253772 34035.71481809725 35084.34165665191 33508.6655159656 35333.1822092098 0.973305545281984 1.0263582588364688 1.032061656538456 0.9628792015671251 1.0154797032968708 0.9901697322705274 1.0407119365816129 0.9632790677208135 0.9929573127298726 0.9483625142382837 1.0 15.108736067943097 -8.274347399539536 24.988191056481067 0.9940767228428935 1.0057633346696815 0.09999355276134891 0.028029052958428453 2099.3396737284556 4064032.017262428 0.003747937975369519 0.004536214268158399 5.31682787017738e-09 8.274347399539536 0.011686611826787985 YSS(ph)QDADEQDWEFQK ddPTM_A549_MK2206_60min_R1 1 YSSQDADEQDWEFQK 15 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 Y(0.001)S(0.399)S(0.6)QDADEQDWEFQK 74.789 0.00084603 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YSS(ph)YQGSR ddPTM_A549_MK2206_60min_R1 2 YSSYQGSR 8 0 Q8TEW0-2;Q8TEW0;Q8TEW0-4;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-7;Q8TEW0-5;Q8TEW0-3 Q8TEW0-2;Q8TEW0-11 PARD3 Partitioning defective 3 homolog 1 YS(0.004)S(0.996)YQGSR;YSS(1)YQGSR 177.06 2.1849e-06 59323000.0 6221.799999999999 6991.4 5193.1 5720.5 7013.4 5778.9 4629.6 5318.6 7325.4 7505.4 8668.1 True False 7271.887731594529 7347.232397316157 5929.559668059469 7122.0227568029995 5981.738150594803 6390.4193622766425 5470.738393486948 6072.527837529383 5666.20859626004 5809.924927273318 6515.571542610326 1.1160782571472159 1.1276420417252673 0.9100597897331837 1.0930772089948861 0.9180680637877466 0.9807918339143056 0.8396405990955035 0.9320023267055637 0.869641068201669 0.8916984318686023 1.0 12.66967602147905 -5.555523880885372 0.7378136600307523 0.9316552844591066 1.209896779774648 0.5047191704349576 0.06819187021853539 1.3217612043450537 0.6428413140551477 0.011585188094805977 0.2780555224973659 2.78276235174746e-06 5.555523880885372 0.27824149531554143 YSSEVATES(ph)PLDFTK ddPTM_A549_MK2206_60min_R1 2 YSSEVATESPLDFTK 15 0 Q8WTT2 Q8WTT2 NOC3L Nucleolar complex protein 3 homolog 1 YSSEVAT(0.005)ES(0.989)PLDFT(0.006)K;YSSEVAT(0.002)ES(0.997)PLDFTK 117.2 8.681200000000001e-07 6678600.0 2478.2 2919.2 2579.7 2584.3999999999996 3562.7 2435.0 2782.9 2982.0 4436.2 3959.8 4596.3 True False 2896.459573827116 3067.7748110886714 2945.540250658182 3217.5781160181245 3038.6315494801524 2692.670083777817 3288.516907558929 3404.707631991994 3431.4077831557015 3065.2784297994604 3454.9118585733695 0.8383599039262164 0.8879458975128361 0.8525659615161582 0.9313054131999632 0.8795105848908369 0.7793744656888864 0.9518381487500089 0.9854687388169415 0.9931969102599991 0.8872233374616972 1.0 11.754433189828111 -7.964957065719146 8.309216499964728 0.994598685427026 0.8660426606887066 0.5024217828469604 0.04770065765675591 0.08659563007685055 18.156085019813997 0.005342364711744422 0.007371306391466985 1.0840340761540834e-08 7.964957065719146 -0.1285560247383194 YSSEVATES(ph)PLDFTK ddPTM_A549_PD325901_60min_R1 2 YSSEVATESPLDFTK 15 0 Q8WTT2 Q8WTT2 NOC3L Nucleolar complex protein 3 homolog 1 YSSEVAT(0.001)ES(0.911)PLDFT(0.088)K;YSSEVAT(0.001)ES(0.999)PLDFTK 210.34 2.2599e-45 9802300.0 5074.9 5408.6 5427.5 5079.6 6403.200000000001 5154.2 5203.6 6579.799999999999 4620.299999999999 6068.9 6213.6 True False 5590.100112056075 5864.401703483349 5795.842788208853 5393.355355391388 5953.461321840792 5112.225904069566 5401.625845519181 6448.560727246754 4426.124858526051 5685.708618275047 5449.366591255702 1.0258256658721034 1.0761620832948973 1.063581003617764 0.9897215144317522 1.0925051970983166 0.9381321330579729 0.9912392119456365 1.1833596839666474 0.8122274000850686 1.0433705501477164 1.0 12.41187283221018 -8.773451431380472 24.999816147324765 0.9113296177572874 1.0410973667571068 0.15510497019033642 0.08295416485895292 191.9359791598384 399461.24487237673 0.014983531217957508 0.016009900460535076 1.6848008332094351e-09 8.773451431380472 0.12976774899981947 YSSGGNFET(ph)PSK ddPTM_A549_PD325901_60min_R1 1 YSSGGNFETPSK 12 0 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 YSSGGNFET(0.984)PS(0.016)K 94.09 0.0002784 15367000.0 16250.0 14992.0 16524.0 17054.0 18771.0 17298.0 19012.0 20411.0 17742.0 17474.0 20459.0 True False 17899.688037382264 16255.428454428571 17645.41800688403 18107.386847555852 17452.589716434522 17157.13082313361 19735.512063765593 20003.88659288025 16996.365439466972 16370.688657868499 17942.67270028652 0.9976043333330397 0.9059647203044057 0.9834330872346714 1.0091800229553707 0.9726861771354626 0.9562193497995222 1.0999204184029086 1.1148777513263572 0.9472594035110257 0.9123885237903873 1.0 14.131107186431619 YSSGGNFET(ph)PSKR ddPTM_A549_MK2206_60min_R1 2 YSSGGNFETPSKR 13 1 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 YS(0.001)S(0.002)GGNFET(0.995)PS(0.002)KR;YSSGGNFET(0.999)PS(0.001)KR 73.983 0.0007298 28816000.0 7113.4 8116.799999999999 7818.8 7855.6 10439.3 7889.6 8105.0 7987.3 11497.5 11722.099999999999 12275.2 True False 8313.968014067399 8529.910450344107 8927.623410414468 9780.222352651286 8903.692798857091 8724.472235307378 9577.573587180686 9119.524235080364 8893.3346077347 9074.06946864798 9226.929061714825 0.9010547234577143 0.9244582236723973 0.9675617261931424 1.0599650530784108 0.9649681643051821 0.9455445226633111 1.0380022999115477 0.9883596345093716 0.9638455599096015 0.9834333187082684 1.0 13.171634849691515 -5.762578942431974 3.359392688255605 0.9877685031937237 0.9078251578878406 0.482604419767675 0.0315926375157147 0.15265806966794745 3.5232892441354027 0.00436458409474371 0.018324588342768417 1.7275119392417508e-06 5.762578942431974 -0.0799433453058831 YSSGGNFET(ph)PSKR ddPTM_A549_PD325901_60min_R1 2 YSSGGNFETPSKR 13 1 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 YSSGGNFET(0.999)PS(0.001)KR;YSSGGNFET(0.994)PS(0.005)KR 83.10600000000001 0.00029608 36284000.0 8466.7 9153.400000000001 9275.599999999999 9732.3 9994.9 11345.3 9939.099999999999 10509.2 9896.8 10261.2 11460.3 True False 9326.233151144887 9924.789141860096 9905.097994713964 10333.442067343014 9292.892704533131 11252.90763832222 10317.337889384213 10299.585761692086 9480.871913049079 9613.30608081265 10050.755752827294 0.9279136196819231 0.9874669513353 0.9855077805395523 1.0281258764482661 0.9245964117592874 1.1196081085899197 1.0265235911719304 1.0247573431276344 0.9432994041649151 0.9564759424293453 1.0 13.295016366512106 -5.2585255092287975 4.694642403378836 0.990405960092518 0.9240743013690224 0.11884705528646233 0.05082762889981523 0.3476403176207603 20.794566798269187 0.007052990972181675 0.0754549576580033 5.514098131786121e-06 5.2585255092287975 -0.06633165872349567 YSSLQKT(ph)PVWK ddPTM_A549_MK2206_60min_R1 2 YSSLQKTPVWK 11 1 H0Y322;Q5TKA1;Q5TKA1-2;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 YSS(0.001)LQKT(0.999)PVWK;YSS(0.002)LQKT(0.998)PVWK 77.078 0.00046471 20813600.0 7162.7 7118.0 6405.9 4729.1 10934.1 8578.0 7507.4 8944.900000000001 11574.400000000001 11815.2 12565.2 True False 8371.588648798115 7480.275796563841 7314.352944796395 5887.729712297366 9325.708374314683 9485.718266384436 8871.39740264038 10212.866967607371 8952.816880518774 9146.138113987217 9444.91405812199 0.8863594308303009 0.7919898212447266 0.7744223928121975 0.6233756788114249 0.9873788492861088 1.0043202307624342 0.9392777264089105 1.0813086180307796 0.9478981836600148 0.9683664729719964 1.0 13.205321953855371 -6.790018647002857 24.99617068096586 0.983152547161205 0.7710610210418998 0.7149641267330697 0.06696328830772681 82.9669012510635 72564.80133713444 0.009354987936100092 0.01768151376112496 1.6217404643114211e-07 6.790018647002857 -0.21209152611930526 YSSLQKT(ph)PVWK ddPTM_A549_PD325901_60min_R1 2 YSSLQKTPVWK 11 1 H0Y322;Q5TKA1;Q5TKA1-2;C9J5J4;H7C4T7;Q5TKA1-3 H0Y322 LIN9 Protein lin-9 homolog 1 YS(0.001)S(0.027)LQKT(0.972)PVWK;Y(0.006)S(0.005)S(0.017)LQKT(0.972)PVWK 69.92 0.0013118000000000001 36801000.0 15028.599999999999 10785.4 11025.3 13238.7 11964.5 12257.3 10606.5 10655.599999999999 17675.9 13789.3 17698.9 True False 16554.292408529414 11694.323509364587 11773.543158514794 14056.424431730835 11124.154795284256 12157.480612694862 11010.136161599503 10443.065698843511 16933.043392598025 12918.641244703334 15522.047502571051 1.0665018520132337 0.7534008324241731 0.7585045179487204 0.9055779805726369 0.7166680035891957 0.7832394927718855 0.7093224112202852 0.672789185647946 1.0909026911425994 0.8322768785859924 1.0 13.922031254534026 -8.771355306158563 24.99983567785665 1.042926286758456 0.7908241992999091 0.24974258182744924 0.12294152395683941 108.02080251210288 272339.01056432707 0.01788587540106855 0.019152553983822058 1.6929521911685079e-09 8.771355306158563 -0.2521020874585468 YSSSSIPEPFGS(ph)RGSPR ddPTM_A549_PD325901_60min_R1 1 YSSSSIPEPFGSRGSPR 17 1 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 YSSSSIPEPFGS(0.589)RGS(0.411)PR 119.31 2.8953e-10 12229000.0 2821.8 2544.6 2085.0 2697.5 2290.3 2811.2 2147.4 2843.5 3525.2 3820.9 3575.3 True False 3108.267058700634 2759.042372274478 2226.500638123531 2864.118448533008 2129.437229106067 2788.30651925039 2229.1204821023684 2786.784161817404 3377.0481032132207 3579.6477219211274 3135.560765694042 0.9912954303765928 0.8799199181406318 0.7100805261003148 0.9134310136384962 0.6791248482262234 0.8892529048574223 0.7109160525578151 0.8887673912454259 1.077015677757317 1.1416291979048248 1.0 11.614507763268126 -8.617764250399686 4.7762525093801065 1.0359064562266131 0.8213862187660572 0.5431986250525396 0.09761511173837653 0.11576628129812354 4.565798500987687 0.015000670236556594 0.01703253830504534 2.4112139612476723e-09 8.617764250399686 -0.21452023746055593 YSVGS(ph)LSPVSASVLK ddPTM_A549_MK2206_60min_R1 1 YSVGSLSPVSASVLK 15 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 YSVGS(0.497)LS(0.497)PVS(0.006)ASVLK 196.33 2.0586e-38 4665800.0 2931.5 3292.1 3298.5 3224.1 4028.8 3211.0 3226.9 3973.7 4574.9 4978.4 4789.9 True False 3426.2655317061553 3459.653828303994 3766.276899172781 4014.004644735351 3436.1688569190896 3550.7858887107063 3813.1859603298385 4536.984143945867 3538.6924546140876 3853.775982351037 3600.435635485191 0.9516252694361623 0.9608986740955235 1.0460614438022697 1.1148663803830028 0.9543758602578198 0.9862100723909222 1.0590901619647972 1.2601208862700493 0.9828511915995457 1.0703638038600032 1.0 11.813955760975508 -3.9924903033624433 15.821629053216892 1.0157704629199795 0.9573580064402057 0.0 0.08964714763877969 0.0 0.0 0.011593417714656377 0.0 0.00010174420826952847 3.9924903033624433 -0.05841245647977378 YSVGS(ph)LSPVSASVLKK ddPTM_A549_MK2206_60min_R1 1 YSVGSLSPVSASVLKK 16 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 YSVGS(0.593)LS(0.406)PVSASVLKK 89.661 4.7051999999999994e-06 4770400.0 1986.3 2277.3 2155.6 2261.5 2472.2 1933.4 2021.5 2182.7 3009.1 2854.4 2860.5 True False 2321.5388796274738 2393.2048428652492 2461.296493514278 2815.5676015225913 2108.542654903538 2137.991104712947 2388.780383280166 2492.104409238406 2327.5436545452917 2209.5890575331046 2150.1589042162454 1.079705725504831 1.1130362682369266 1.1447044628598952 1.3094695447864557 0.9806450354757026 0.9943409766229656 1.110978532142907 1.1590326670050477 1.0824984376648688 1.0276398889404512 1.0 11.070227568594659 -12.723501202033816 0.17288357515502076 0.8049574688385452 1.1430202899712893 0.16226594865911803 0.08285563866202551 29.40076247167761 0.652144616028935 2.259386550169926 0.13169262459155837 1.8901609996201213e-13 12.723501202033816 0.3380628211327441 YSVGSLS(ph)PVSASVLK ddPTM_A549_MK2206_60min_R1 1 YSVGSLSPVSASVLK 15 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 YSVGS(0.023)LS(0.973)PVS(0.004)ASVLK 161.04 1.0717e-19 4279600.0 1793.6 2269.9 2813.0 1911.5 3110.0 2382.5 1640.2 2267.1 3509.3 2718.8 3549.0 True False 2096.315830690145 2385.428214473203 3211.925698763992 2379.8175858104964 2652.5231197920884 2634.614568624496 1938.2031089073105 2588.468367702563 2714.449153200555 2104.621191711393 2667.6853525829238 0.7858182482654622 0.8941939918677321 1.2040121956864667 0.8920908095500445 0.9943163339049131 0.9876031916858531 0.7265486190231133 0.9703049743840063 1.0175297287486897 0.7889315693373069 1.0 11.38137279862169 -8.522817843374114 24.728450025769103 1.0075221185298189 0.9329578773060662 0.0 0.13334425208281217 3.8685210819332663 1570936.7440274179 0.019211350100817468 0.02189830455659417 3.0004207249630437e-09 8.522817843374114 -0.07456424122375271 YSVGSLS(ph)PVSASVLK ddPTM_A549_PD325901_60min_R1 2 YSVGSLSPVSASVLK 15 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 YSVGS(0.002)LS(0.998)PVSASVLK;YSVGS(0.012)LS(0.988)PVSASVLK 264.92 1.6760999999999996e-90 16334300.0 10961.0 10432.1 10162.900000000001 11477.2 14627.0 12734.5 11884.9 12161.2 12804.0 13546.099999999999 12754.6 True False 12073.752650938273 11311.249678458138 10852.615508482324 12186.120577387597 13599.64998041061 12630.79445411002 12337.186373166829 11918.635325723153 12265.892407109404 12690.796934208109 11185.865058071 1.0793758541031773 1.01120920194694 0.9702079769549674 1.089421382622069 1.2157888468892246 1.1291745777852427 1.1029264441434603 1.0655085917671994 1.0965528676978922 1.1345387118764898 1.0 13.449389210978246 -4.840528379331314 18.21306441772265 1.0629435703378678 14.268691352122078 0.0 0.06845581611093465 3052.1654376435026 347067.79943669314 0.009899094058500405 7347.762141415482 1.4436822625995289e-05 4.840528379331314 13.20574778178421 YSVGSLS(ph)PVSASVLKK ddPTM_A549_MK2206_60min_R1 1 YSVGSLSPVSASVLKK 16 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 YSVGS(0.003)LS(0.982)PVS(0.014)ASVLKK 113.47 9.1148e-08 6113500.0 2206.8 2514.6 2511.0 2303.7 3576.6 2766.9 2020.9 2631.2 3922.6 4067.1 3707.5 True False 2579.253888920057 2642.5823992749965 2867.0975576240244 2868.106603417024 3050.486877893371 3059.691521480425 2388.071371046694 3004.1806577120483 3034.137363105034 3148.3392852763773 2786.8254282054613 0.9255168489620581 0.9482410963131809 1.0288041470434885 1.0291662241878934 1.0946099626547798 1.0979128762473909 0.8569145906582532 1.0779938446472945 1.088743246131074 1.1297224624879743 1.0 11.444406916902738 -5.730701653190938 3.058459858555099 1.0390525531832522 0.9283866350483176 0.2629876727414131 0.06979141446780118 0.25460090548795256 4.712429424135463 0.009099694356609468 0.041859198011415494 1.8590811474764436e-06 5.730701653190938 -0.11066591813493454 YSVGSLS(ph)PVSASVLKK ddPTM_A549_PD325901_60min_R1 2 YSVGSLSPVSASVLKK 16 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 YSVGS(0.126)LS(0.854)PVS(0.019)AS(0.001)VLKK;YSVGS(0.017)LS(0.968)PVS(0.015)ASVLKK 104.03 4.1986000000000006e-07 22037000.0 6814.5 6839.1 7232.8 7080.5 7858.900000000001 7636.6 7736.9 7777.1 8396.9 7663.5 8796.400000000001 True False 7506.303023430243 7415.4549588235395 7723.661302359654 7517.8464040177805 7306.917975733167 7574.410061506662 8031.331963294134 7621.979639483081 8044.007494006322 7179.625302138908 7714.4985649738655 0.9730124336935012 0.9612361576540991 1.0011877294821714 0.9745087565575623 0.9471669369294802 0.9818408802221771 1.0410698628889228 0.9880071368590503 1.0427129419050676 0.9306664900731926 1.0 12.913356670708161 -7.6235654823427765 6.368133538113109 1.019110276517651 0.9719210523703782 0.031485946848113344 0.03274618504113756 0.12769837393435277 7.004898007568896 0.0032654481754882596 0.004856212573992014 2.3792195383612998e-08 7.6235654823427765 -0.04718922414727278 YSVLNNDDYFADVS(ph)PLR ddPTM_A549_MK2206_60min_R1 1 YSVLNNDDYFADVSPLR 17 0 Q1ED39;H3BMC9 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 YSVLNNDDYFADVS(1)PLR 210.43 6.1475e-55 9959900.0 1435.4 1724.9 1964.7 1230.4 2540.8 2140.5 1993.0 1924.5 3195.0 2589.7 2709.1 True False 1677.6604278393365 1812.6900423564157 2243.3240029724893 1531.8480552347557 2167.051685777408 2367.006289251093 2355.1023021901415 2197.3037685340687 2471.3376013665916 2004.684971375237 2036.3557026436729 0.8238543127123298 0.8901637567558133 1.1016366148900816 0.7522497436209468 1.0641813131979154 1.1623736885349438 1.156527957828124 1.0790373045737771 1.213608014630356 0.984447348158615 1.0 10.991773872410738 -6.956427150713455 12.291312593062978 1.110018777800178 0.9068947080750823 0.4774607896488079 0.10157059429153752 0.6547867517777121 183.2781392212618 0.01525633635217816 0.02883328766600577 1.1055358982805733e-07 6.956427150713455 -0.20312406972509567 YSVLNNDDYFADVS(ph)PLR ddPTM_A549_PD325901_60min_R1 1 YSVLNNDDYFADVSPLR 17 0 Q1ED39;H3BMC9 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 YSVLNNDDYFADVS(1)PLR 255.19 3.287399999999999e-86 21622000.0 3998.0 3982.6 3995.2 3685.8 4031.9 3831.3 4193.5 3570.6 4117.5 3629.5 3793.0 True False 4403.874016827956 4318.227678935917 4266.338297089273 3913.4634949408533 3748.7132532998953 3800.099163063465 4353.08593727125 3499.3815819184883 3944.455793991952 3400.332750585654 3326.4850458080464 1.3238821026349146 1.2981353048250253 1.2825364426230041 1.1764560612928359 1.1269292366198762 1.1423767462451861 1.3086143113004223 1.051975744285495 1.1857728923094535 1.0221999208656203 1.0 11.699782832770513 -13.808314599202081 0.037105889025745215 2.361942535688603e-12 1.8969011163755205 0.6557719758144327 0.06603420092198779 258.3197956903068 0.9131435063150904 35.94338223371356 14.904164176402956 1.5548389115739678e-14 13.808314599202081 1.8969011163731586 YTEDLEFKIS(ph)DEEADDADAAGR ddPTM_A549_PD325901_60min_R1 1 YTEDLEFKISDEEADDADAAGR 22 1 Q9P2D1;Q9P2D1-2;Q9P2D1-3 Q9P2D1 CHD7 Chromodomain-helicase-DNA-binding protein 7 1 Y(0.001)T(0.045)EDLEFKIS(0.954)DEEADDADAAGR 42.59 0.017934000000000002 4230000.0 2120.5 2129.8 1999.0 1773.2 2566.4 2249.0 2169.1 2071.5 2488.5 2102.5 2109.4 True False 2335.771598970406 2309.2857205337486 2134.664160963519 1882.7265367706127 2386.144917599357 2230.684889653573 2251.6462874770646 2030.1823074396884 2383.916998991859 1969.747791185106 1849.9571725883168 1.2626084720125577 1.2482914495273287 1.1538992321518786 1.0177135798967971 1.289837923253568 1.2058035303231218 1.2171342779393837 1.097421247108772 1.2886336150455133 1.0647531847611302 1.0 10.85327615669576 -10.969253831680032 1.1960455049529723 0.9983440023007921 1.2025364852356972 0.3774490063401791 0.08077597543988665 0.35097565464905256 0.8807650733563034 0.05962300496464212 0.013316196866216023 1.0733618821815224e-11 10.969253831680032 0.2041924829349051 YTFDFS(ph)EEEDDDADDDDDDNNDLEELK ddPTM_A549_PD325901_60min_R1 2 YTFDFSEEEDDDADDDDDDNNDLEELK 27 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 YT(0.006)FDFS(0.994)EEEDDDADDDDDDNNDLEELK;YT(0.001)FDFS(0.999)EEEDDDADDDDDDNNDLEELK 157.96 2.1316e-41 45057000.0 8347.8 7588.8 8055.7 8971.1 9671.3 7367.4 7521.1 8991.3 8274.7 9083.7 8428.0 True False 9195.262510674436 8228.334808895916 8602.408244859345 9525.224472153652 8992.021252173728 7307.4023370536825 7807.319576203844 8811.961467961604 7926.943135044375 8510.153631766065 7391.409429493852 1.244047241380337 1.1132294709669972 1.1638386869131154 1.288688519153771 1.2165502855643437 0.9886344961348025 1.0562693963414327 1.1921896022698106 1.072453530095842 1.1513573578819896 1.0 12.85163377529358 -7.250994898285882 24.49384865589381 1.0471646462764406 1.2024899705854393 0.41013716372604003 0.07203365379248082 329.1471887545389 771898.093524849 0.010397178133384826 0.017879558087285242 5.610545667751847e-08 7.250994898285882 0.1553253243089987 YTGEEDGAGGHS(ph)PAPPQTEECLR ddPTM_A549_MK2206_60min_R1 2 YTGEEDGAGGHSPAPPQTEECLR 23 0 O94762-4;O94762;J3KSV9;J3KS37 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 1 YTGEEDGAGGHS(1)PAPPQTEECLR;YTGEEDGAGGHS(1)PAPPQTEECLR 209.62 8.7945e-74 149849000.0 3547.5 3571.2999999999997 3281.96 3525.91 4012.4 3321.2999999999997 3275.4700000000003 2978.95 4682.1 4644.4 4733.4 True False 4146.231271952103 3753.0639157443716 3747.3912784626646 4389.758108284114 3422.181275194138 3672.75776149949 3870.580500629575 3401.2252851517605 3621.6118257773114 3595.2268143241117 3557.966144805864 1.1653374718039475 1.0548340717697169 1.0532397234676711 1.23378298995131 0.9618363795254339 1.0322632684015853 1.0878632182265378 0.9559465005357278 1.0178882199495802 1.0104724631999782 1.0 11.796837067624365 -6.7884352490946025 24.999928721919222 1.0098420968019657 1.1164041849035977 0.4907475040404071 0.0571395656808502 140.85881381662736 130444.11302937304 0.007693376191705735 0.014541751640370191 1.6276639732489897e-07 6.7884352490946025 0.10656208810163204 YTGEEDGAGGHS(ph)PAPPQTEECLR ddPTM_A549_PD325901_60min_R1 2 YTGEEDGAGGHSPAPPQTEECLR 23 0 O94762-4;O94762;J3KSV9;J3KS37 O94762-4 RECQL5 ATP-dependent DNA helicase Q5 1 YTGEEDGAGGHS(1)PAPPQTEECLR;YTGEEDGAGGHS(1)PAPPQTEECLR 176.97 2.7334999999999994e-41 210960000.0 2186.33 2201.05 2221.09 2413.84 2370.14 2373.16 2146.4 1752.2 1911.98 2518.42 2578.48 True False 2408.28461210892 2386.5402080856475 2371.826523899182 2562.9374145716074 2203.6695429391134 2353.8337717786885 2228.0824265551464 1717.2509964256926 1831.626129689554 2359.4065314037553 2261.3433063314337 1.064979654069363 1.0553639517731255 1.048857339466507 1.1333694478833682 0.9744957949415102 1.0409006740322422 0.9852915390232161 0.7593942023829989 0.8099726054691767 1.0433650321018302 1.0 11.142964316443683 -8.013249611443653 6.994649739792138 0.8952486878143633 1.0501081162930248 0.4278749313477417 0.08070944424790301 0.11717055637647592 29.87284583268498 0.013989820764846332 0.018644717170151114 9.69952325367613e-09 8.013249611443653 0.15485942847866152 YTGS(ph)HKER ddPTM_A549_MK2206_60min_R1 2 YTGSHKER 8 1 Q9BW30 Q9BW30 TPPP3 Tubulin polymerization-promoting protein family member 3 1 Y(0.001)T(0.021)GS(0.978)HKER;Y(0.001)T(0.004)GS(0.995)HKER 40.589 0.041043 2281760.0 863.76 664.19 448.64 612.31 850.76 553.6600000000001 579.5899999999999 700.38 888.8199999999999 899.74 708.47 True False 1009.5415710955168 697.9944340151364 512.2638981491209 762.3259774876407 725.6143309949568 612.2479337102367 684.8940006655213 799.6610098237928 687.503689153882 696.4881091034313 532.5373462227174 1.8957197617334938 1.3106957455021788 0.9619304670040593 1.4314976834860729 1.3625604591710474 1.1496807464357304 1.2860957180251644 1.5016055033431575 1.2909961977884545 1.3078671647042508 1.0 9.05673889318085 -14.187435521219912 0.168713447308603 1.6813079560339577e-15 1.429526368292944 0.05039501862856366 0.235141214656926 42.39637101401453 0.578758871397663 14.444405787394608 0.3098875332304292 6.494780510463824e-15 14.187435521219912 1.4295263682929422 YTGS(ph)PDSLR ddPTM_A549_MK2206_60min_R1 1 YTGSPDSLR 9 0 Q9HCM2-4;Q9HCM2;O75051 Q9HCM2-4 PLXNA4;PLXNA2 Plexin-A4;Plexin-A2 1 Y(0.001)T(0.028)GS(0.486)PDS(0.486)LR 61.765 0.0074849999999999995 3872300.0 1309.2 1489.4 1428.7 1156.8 1477.4 1216.2 1294.4 1333.5 1947.7 2257.7 1789.5 True False 1530.1609531331057 1565.2040982582444 1631.311143200894 1440.2160519307254 1260.076417099946 1344.8974767517777 1529.5757250150132 1522.5277086724745 1506.549059837781 1747.6840019592526 1345.1177623125216 1.1375665358120457 1.163618637796702 1.212764554083614 1.0706988579607417 0.9367777695044538 0.9998362332526447 1.1371314600629256 1.1318917579788335 1.1200127617434235 1.2992795507767592 1.0 10.393516767977129 -14.999999997694148 0.28730984097085444 0.1801902759336673 1.108339043072035 0.0 0.1169543244245771 59.784823772474134 0.789017711493612 28.28828235251233 0.03212467134531166 1.0000000053094193e-15 14.999999997694148 0.9281487671383677 YTGSPDS(ph)LR ddPTM_A549_PD325901_60min_R1 1 YTGSPDSLR 9 0 Q9HCM2-4;Q9HCM2;O75051 Q9HCM2-4 PLXNA4;PLXNA2 Plexin-A4;Plexin-A2 1 YT(0.006)GS(0.448)PDS(0.546)LR 89.88600000000001 0.0010775000000000001 5223500.0 2226.8 2225.2 2122.3 2315.8 2356.2 2246.0 1979.1 2181.5 2503.1 2810.9 2670.1 True False 2452.8630967164836 2412.7254133400793 2266.332040426652 2458.8417064366026 2190.708640448725 2227.709320658927 2054.415733505074 2137.9882711463556 2397.9034117647257 2633.4192942888044 2341.6946271584648 1.0474735126727077 1.0303330696316313 0.9678170732179278 1.0500266251284398 0.935522768443572 0.9513235820001631 0.8773200867775018 0.9130090005547405 1.0240034648217422 1.1245784415042765 1.0 11.193337235561483 -5.625569101955424 5.256941731323583 0.9874571155140265 1.0434437272289583 0.09883708979484918 0.06488578285371562 0.3253310751689698 13.566661749164037 0.007782833493861251 0.03199418088867493 2.368268279219435e-06 5.625569101955424 0.0559866117149318 YTIGDIFVHS(ph)PQR ddPTM_A549_MK2206_60min_R1 2 YTIGDIFVHSPQR 13 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 Y(0.001)T(0.001)IGDIFVHS(0.998)PQR;Y(0.016)T(0.02)IGDIFVHS(0.964)PQR 64.565 0.0018166 10359300.0 568.97 502.83000000000004 357.43 209.476 733.85 355.01 456.78000000000003 356.56 578.29 598.9 799.72 True False 664.9982260190526 528.4218992394208 408.11894863462993 260.7976294037352 625.9016371252166 392.5769225634343 539.7710133439103 407.1034719192033 447.30823833936984 463.6080740458857 601.1274528508352 1.1062516324372003 0.879051350480485 0.6789224925581652 0.433847478046307 1.0412128645213095 0.6530676992069584 0.8979310640098982 0.6772332056846232 0.7441154720484304 0.7712309125913872 1.0 9.231527097685463 -10.742214343374016 0.9657356664094406 1.001652920042994 0.7811379568773807 0.0 0.19172027281358633 0.8065756613514763 1.3210435794743551 0.12339783442114548 0.030776680932204693 1.810446337414357e-11 10.742214343374016 -0.22051496316561325 YTIGDIFVHS(ph)PQR ddPTM_A549_PD325901_60min_R1 2 YTIGDIFVHSPQR 13 0 Q9P2F8 Q9P2F8 SIPA1L2 Signal-induced proliferation-associated 1-like protein 2 1 YTIGDIFVHS(1)PQR;YTIGDIFVHS(0.999)PQR 68.944 0.0010992 20403200.0 808.71 836.47 600.0899999999999 799.44 873.0799999999999 537.03 705.81 702.83 736.99 1070.29 936.72 True False 890.8096438591639 906.9622624917207 640.815716034316 848.8195931400289 811.7578727624868 532.6566057317286 732.6699857840514 688.8115042905309 706.0168732517621 1002.7117067431655 821.509378357319 1.0843572420809326 1.1040193653117782 0.7800467443423276 1.0332439476677906 0.9881297696024711 0.6483877357515052 0.8918583342883927 0.8384706522375567 0.8594142585000133 1.2205724403879317 1.0 9.682133234861658 -5.7358757122409445 24.868685878080978 0.9068326424522483 1.0941885830220124 0.18475142129328592 0.14139233545151778 198.4970869428561 193097.34903769536 0.014983679809059597 0.05798808204471789 1.8370640048746045e-06 5.7358757122409445 0.18735594056976412 YTKS(ph)PGK ddPTM_A549_MK2206_60min_R1 2 YTKSPGK 7 1 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 Y(0.001)T(0.098)KS(0.901)PGK;Y(0.08)T(0.015)KS(0.905)PGK 59.757 0.008235899999999999 31740000.0 10377.5 9423.900000000001 7684.9 6583.299999999999 12456.0 14407.6 12441.5 14188.900000000001 14448.9 14384.8 12959.5 True False 12128.968294484275 9903.536257268612 8774.734376975255 8196.208795535562 10623.738900363429 15932.20266900914 14701.959504615485 16200.220026683826 11176.247220152036 11135.26368932251 9741.298485995607 1.2451079609069835 1.0166546350577639 0.9007766664362133 0.8413877069179931 1.0905875552049293 1.6355317201206563 1.5092402235442717 1.6630452346752094 1.1473056940221424 1.143098500197988 1.0 13.249898376728128 -7.001608080607777 24.96774686167773 1.1994671714366343 0.991324193974622 0.2083402027126704 0.24166642880975095 118.03437640078252 1832716.4334093134 0.04227270687789546 0.07908262702504229 9.963041042618458e-08 7.001608080607777 -0.20814297746201227 YTKS(ph)PGK ddPTM_A549_PD325901_60min_R1 2 YTKSPGK 7 1 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 Y(0.049)T(0.05)KS(0.901)PGK;Y(0.13)T(0.055)KS(0.815)PGK 60.518 0.008009100000000002 32273000.0 16732.9 17161.4 14150.8 13003.4 16952.800000000003 13335.8 10809.7 11726.5 15100.3 18539.7 19566.6 True False 18431.611689890084 18607.65140593853 15111.158383673126 13806.590485135906 15762.093811985027 13227.197666270404 11221.069048794807 11492.605758238711 14465.68690370775 17369.100177994995 17160.032242896836 1.0741012271419013 1.084359932577686 0.8806019807992019 0.8045783533332788 0.918535209542484 0.7708142664909983 0.6539072240636155 0.6697310118980645 0.8429871633659445 1.0121834232091667 1.0 14.066764643145863 -5.7731223548177795 6.773067859618263 0.8678731067907973 1.0804222790063769 0.382908660899028 0.11285106716634127 0.1289420882006879 26.932886707348903 0.018120937312816845 0.06167812886523996 1.6860779357190015e-06 5.7731223548177795 0.21254917221557956 YTLENKEEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_A549_PD325901_60min_R1 2 YTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 34 1 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 YTLENKEEGS(0.044)LS(0.946)DT(0.01)EADAVSGQLPDPTTNPSAGK;YTLENKEEGS(0.03)LS(0.968)DT(0.002)EADAVSGQLPDPTTNPSAGK 241.65 1.4212999999999994e-131 68262000.0 3182.7 2887.6 3236.6000000000004 2801.2 3651.7 3351.6 3677.3 4125.9 2907.6000000000004 3178.7 3556.6 True False 3505.8053610200923 3130.948186033083 3456.2551392568903 2974.2237620132187 3395.2171896810996 3324.305680819437 3817.24166379577 4043.605687794065 2785.4036834513668 2977.996339519663 3119.1607471449765 1.1239578993256498 1.0037790418140187 1.1080721448615505 0.9535333389712534 1.0885034356721763 1.0657692726680512 1.2238040848935918 1.2963761779495493 0.8929977994884991 0.9547428237693347 1.0 11.606942189132097 -8.815373538746318 24.99999958771028 0.9494711344546232 1.101163603321824 0.3719817252590836 0.09154136853378073 77.7254860977866 36027.54548142561 0.017144602149465508 0.01825182633984542 1.5297711322569588e-09 8.815373538746318 0.15169246886720078 YTPPTQPPIS(ph)PPYQEACTLK ddPTM_A549_MK2206_60min_R1 1 YTPPTQPPISPPYQEACTLK 20 0 B7Z4K4;Q9UET6-2;Q9UET6 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase 1 Y(0.007)T(0.008)PPT(0.033)QPPIS(0.878)PPY(0.073)QEACT(0.001)LK 43.163999999999994 0.018701 3961900.0 1560.9 1790.0 2311.5 1476.9 2794.6 2476.9 2492.0 2630.0 3658.0 2527.8 2625.0 True False 1824.3417596589259 1881.1033542918335 2639.305457765009 1838.7405663005595 2383.5180419842354 2739.003913966847 2944.7641430295216 3002.8105540372017 2829.46884062566 1956.7682243666543 1973.140053685593 0.9245880728290272 0.9533552120530695 1.337616887780012 0.9318854801340679 1.2079821893697331 1.3881447030841578 1.4924253032769008 1.5218435956577463 1.4339929065554904 0.9917026521820597 1.0 10.946277647001592 -6.947305943060434 7.494076676626859 1.272585983323619 1.053416201886534 0.2794569411814518 0.19661967761466367 0.3288043400254183 39.397877164259995 0.03326689744031577 0.06301224757183314 1.129000298994124e-07 6.947305943060434 -0.219169781437085 YTPPTQPPIS(ph)PPYQEACTLKR ddPTM_A549_PD325901_60min_R1 1 YTPPTQPPISPPYQEACTLKR 21 1 B7Z4K4;Q9UET6-2;Q9UET6 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase 1 YTPPTQPPIS(1)PPYQEACTLKR 116.65 5.5522e-15 4206000.0 1794.3 1854.4 1838.6 1623.0 1606.8 2236.5 1798.4 2158.8 1652.5 2155.1 2760.2 True False 1976.4560151061544 2010.676796017367 1963.378452399963 1723.2490238995633 1493.9439111590732 2218.2866855092125 1866.8390961222397 2115.7410404541633 1583.0511717235468 2019.0266182083324 2420.7128983494226 0.8164768388906477 0.8306134929872762 0.8110744788193198 0.7118766645456266 0.6171503907703089 0.9163774386552673 0.7711939310916032 0.8740156843452166 0.6539607290079544 0.8340628166128323 1.0 11.2412162674731 -11.006547777791745 1.271448631937265 1.000722330004973 0.7671208853174807 0.16149061660156483 0.09751545768572928 0.31935126330259656 0.9143950515114642 0.06466124020457215 0.014502794747079002 9.850362706081994e-12 11.006547777791745 -0.23360144468749233 YTQVGPDHNR ddPTM_A549_MK2206_60min_R1 2 YTQVGPDHNR 10 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ; 78.13600000000001 0.0014538 5722600.0 2018.2 2163.16 1809.37 1419.7 2220.54 1857.2199999999998 1558.31 1915.23 2504.2 3132.7 2657.3999999999996 False True 2358.8228197473536 2273.2556043966065 2065.965873292784 1767.5265637327554 1893.9015075315501 2053.7497876771404 1841.4347559086414 2186.7197176458835 1937.0026983856703 2425.020894245359 1997.4942394910854 1.1808909247960215 1.1380536471413196 1.034278764087522 0.8848719204231996 0.9481386579688319 1.0281630590335957 0.9218723736483945 1.094731426210775 0.9697162875819723 1.2140314831962657 1.0 10.963975627279856 -5.7931194715034 3.1741666670535897 0.9830214053677788 1.1692875913964174 0.2780329867365162 0.0872022685200219 0.10664930515063634 2.1570062059900823 0.006875331796130036 0.02847718466593831 1.610202618289187e-06 5.7931194715034 0.18626618602863854 YTS(ph)DKDVPSER ddPTM_A549_MK2206_60min_R1 1 YTSDKDVPSER 11 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 Y(0.001)T(0.295)S(0.702)DKDVPS(0.003)ER 51.073 0.0070532 23968000.0 3402.2 3800.4 3327.1 2776.7 4496.5 3653.7 2627.5 3572.0 4372.5 5194.2 4889.2 True False 3976.408184196039 3993.824127179156 3798.9328092277574 3456.9916246507996 3835.070806477532 4040.33210887023 3104.8827390891124 4078.341938791213 3382.135731447705 4020.8266124714296 3675.076704944611 1.0819932489697437 1.086732182162535 1.0337016378777903 0.9406583595927699 1.0435349012763893 1.0993871511400533 0.8448484176974227 1.1097297461312934 0.9202898341950877 1.0940796438511424 1.0 11.84355864636302 -4.754942467285027 0.38884778206089937 0.9682860668492941 1.2476562655089194 0.0 0.08328670005093605 8.628025523449443 0.655706222404709 0.017752086735619583 1.2176425938046065 1.7581565085079447e-05 4.754942467285027 0.2793701986596253 YVANLFPYK ddPTM_A549_PD325901_60min_R1 1 YVANLFPYK 9 0 Q15181;Q5SQT6 Q15181 PPA1 Inorganic pyrophosphatase 0 56.411 0.019355 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YVAQAHDKPR ddPTM_A549_MK2206_60min_R1 2 YVAQAHDKPR 10 1 I3L0K7;Q12931-2;Q12931;I3L239 I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial 0 ; 94.29700000000001 0.0020718000000000004 3571500.0 799.79 1098.1799999999998 742.27 631.91 1217.05 727.5799999999999 887.6800000000001 818.98 1194.97 1311.37 1107.71 False True 934.7749990118599 1154.0726712939693 847.5350474303405 786.7279783675182 1038.0235572163867 804.5720326714835 1048.9599656839664 935.0729230210609 924.311202974972 1015.1306062139802 832.6350357592645 1.1226707487266085 1.3860486548486297 1.0178950092551522 0.9448653306428734 1.2466729270764259 0.9662961539179157 1.2598076235495415 1.1230285573659355 1.1101036628036074 1.2191783465949175 1.0 9.70154045549846 -14.999999999993284 0.15111244528578802 0.5084061551085768 1.1729389811090252 0.0 0.14070601630309387 88.39775763864004 0.87755708487814 12.878726626352455 0.22641409857915742 1.0000000000154651e-15 14.999999999993284 0.6645328260004484 YVAQAHDKPR ddPTM_A549_PD325901_60min_R1 2 YVAQAHDKPR 10 1 I3L0K7;Q12931-2;Q12931;I3L239 I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial 0 ; 98.943 0.0017251999999999999 5595800.0 961.06 842.9100000000001 974.8299999999999 964.72 1090.51 1024.17 1024.6 945.04 1015.27 1136.23 1117.57 False True 1058.6261037050217 913.9449838929024 1040.987825928998 1024.3085633619137 1013.916339655266 1015.8294990824808 1063.591713682633 926.1904358304619 972.60173259653 1064.4882438897753 980.1159748599256 1.0801028968600541 0.9324865702995199 1.0621067839219456 1.0450891421378006 1.0344860870165604 1.0364380595139868 1.0851692462564315 0.9449804508724893 0.9923333131423866 1.0860839647490776 1.0 9.93680865987585 -8.262744916598384 24.999459600835287 0.9924235256228198 1.0360862682522938 0.07136274049210789 0.04947068903557106 133.8131072692913 2562342.086868294 0.0061996954211128484 0.0077022521087780965 5.460785068032576e-09 8.262744916598384 0.043662742629474005 YVASVLGLTPS(ph)PR ddPTM_A549_MK2206_60min_R1 2 YVASVLGLTPSPR 13 0 Q99666;O14715;F8W705;Q99666-2;C9J1W9;C9JF75 Q99666 RGPD5;RGPD8;RGPD6 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YVASVLGLT(0.013)PS(0.987)PR;YVASVLGLT(0.03)PS(0.97)PR 117.93 1.4490999999999999e-05 13590900.0 4125.0 3916.0 3837.5 3694.3999999999996 4949.9 3995.7 4170.8 3762.9 5531.2 5470.7 5254.9 True False 4821.19915343268 4115.307673411633 4381.715204055036 4599.528165847916 4221.776267092881 4418.522321869003 4928.580372290339 4296.302598397944 4278.392031511388 4234.865070433837 3949.963302138067 1.220568087511857 1.0418597234014977 1.109305294477867 1.1644483287625098 1.0688140481729755 1.1186236387252788 1.2477534587783534 1.0876816491111216 1.0831472862534057 1.0721277000577591 1.0 11.947623534389963 -9.632554677542375 0.7613653354226366 1.0101463766953025 1.1303833955386515 0.25020509589097073 0.061413365083238365 0.41171642919329454 0.5093926476257458 0.02164720838576992 0.012662191357832395 2.33047969013211e-10 9.632554677542375 0.12023701884334903 YVASVLGLTPS(ph)PR ddPTM_A549_PD325901_60min_R1 2 YVASVLGLTPSPR 13 0 Q99666;O14715;F8W705;Q99666-2;C9J1W9;C9JF75 Q99666 RGPD5;RGPD8;RGPD6 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YVASVLGLT(0.001)PS(0.999)PR;YVASVLGLT(0.001)PS(0.999)PR 175.29 6.2025e-22 26815000.0 7627.7 8677.3 9671.7 9485.0 11397.3 11112.099999999999 9469.4 10567.599999999999 11039.7 10651.3 9940.0 True False 8402.058488784045 9408.566523987 10328.079722656767 10070.866908002066 10596.792966550483 11021.606741805017 9829.763198854502 10356.820927878174 10575.739800590885 9978.77510023777 8717.443014851558 0.963821441042952 1.0792805307655011 1.1847602221272029 1.1552546877386791 1.2155849999245365 1.2643164656227688 1.1275970697035733 1.188057198680126 1.2131699378560228 1.1446906028794603 1.0 13.089689312925923 -4.109761984688367 10.09483743714866 1.1262930573768488 1.1409967158760224 0.0 0.08920885064904586 0.0 0.0 0.01398105259314513 0.0 7.766726558535018e-05 4.109761984688367 0.014703658499173544 YVASYLLAALGGNS(ph)SPSAK ddPTM_A549_MK2206_60min_R1 1 YVASYLLAALGGNSSPSAK 19 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 1 YVASYLLAALGGNS(0.657)S(0.343)PSAK 254.58 3.142499999999999e-97 41249000.0 3223.2 3953.4 4082.0 3438.9 4812.0 4233.6 4301.5 3785.2 5905.9 5231.0 5315.9 True False 3767.1973603258666 4154.611173663317 4660.888980573983 4281.430654378087 4104.161174417853 4681.596741963761 5083.026870482136 4321.763691688828 4568.223079784332 4049.313466912718 3995.815318623712 0.9427856544739939 1.0397405391334 1.166442542739774 1.0714786127434814 1.0271148306802775 1.171624904720635 1.2720875378777252 1.0815724319254532 1.1432518060814123 1.0133885437696937 1.0 11.964274189848762 -5.388120521626743 3.5721552341331724 1.0931256616314917 0.9417443659595898 0.26697439108778587 0.077744353370524 0.2994362134643992 6.108666915897287 0.011772767915282506 0.09491023412972899 4.09147101029471e-06 5.388120521626743 -0.15138129567190195 YVASYLLAALGGNSS(ph)PSAK ddPTM_A549_PD325901_60min_R1 2 YVASYLLAALGGNSSPSAK 19 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 1 YVASYLLAALGGNS(0.173)S(0.807)PS(0.02)AK;YVASYLLAALGGNS(0.478)S(0.518)PS(0.003)AK 359.65 4.925599999999998e-230 46278000.0 16819.0 20765.0 20802.0 22746.0 24006.0 19977.0 18759.0 22550.0 22354.0 23640.0 21124.0 True False 18526.4524985066 22514.93942477385 22213.74881258785 24150.968760085918 22319.90137620408 19814.31393535325 19472.88401031868 22100.22255986722 21414.539118128992 22147.366365572365 18525.88191606884 1.0000307992051523 1.2153234877981711 1.1990656592342985 1.3036339575897886 1.2047956193029825 1.0695476752535522 1.0511177874575806 1.1929376782164467 1.1559254892774962 1.195482431870752 1.0 14.177254602547713 -7.260644765944133 24.82773017913769 1.0831567429365676 1.193698428955098 0.10002692757580389 0.08959683479983829 74.05130424002054 2313716.337638846 0.01380913612614004 0.02304447469218721 5.4872561516893756e-08 7.260644765944133 0.11054168601853043 YVDAETS(ph)L ddPTM_A549_PD325901_60min_R1 1 YVDAETSL 8 0 Q9Y6M7-13;Q9Y6M7-7;Q9Y6M7-6;Q9Y6M7-8;Q9Y6M7-5;H7C3C4;Q9Y6M7-2;Q9Y6M7-9;Q9Y6M7;Q9Y6M7-4 Q9Y6M7-13;Q9Y6M7-2 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 YVDAET(0.071)S(0.929)L 60.973 0.011052 2116300.0 528.87 464.74 528.24 455.11 623.22 637.11 513.29 612.18 630.59 528.54 577.79 True False 582.560493066484 503.9052708051717 564.0895429651673 483.2211110701969 579.4471771922814 631.9215873931473 532.8235318330657 599.9695896540808 604.0884952357948 495.16789419879944 506.72549291258355 1.1496569665718062 0.9944344183451249 1.1132053761946408 0.9536151581652486 1.1435129775328734 1.2470688691049567 1.0515033075807463 1.1840130367342363 1.1921415118935166 0.9771915980635734 1.0 8.985060601175933 YVDEENS(ph)DGET(ph)SNHR ddPTM_A549_PD325901_60min_R1 2 YVDEENSDGETSNHR 15 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1;H0YH26 A0A494C108 KRI1 Protein KRI1 homolog 2 YVDEENS(0.667)DGET(0.667)S(0.667)NHR;YVDEENS(0.667)DGET(0.667)S(0.667)NHR 48.625 0.038205 4615690.0 389.45 645.73 325.38 402.81 402.51 424.8 393.5 723.81 575.3000000000001 572.48 558.6 True False 428.98667730206313 700.1479332896324 347.46224346888954 427.69065885211495 374.2390861841167 421.34056964199107 408.4748578314624 709.3730417320392 551.1221416596409 536.3335150999518 489.8957412571508 0.8756693336447766 1.4291774235328947 0.7092575301374244 0.8730238351421311 0.7639157777198866 0.8600617114179515 0.8337995688291769 1.4480081821321298 1.124978429584575 1.0947911360152556 1.0 8.936330939868862 YVDEENS(ph)DGETS(ph)NHR ddPTM_A549_MK2206_60min_R1 2 YVDEENSDGETSNHR 15 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1;H0YH26 A0A494C108 KRI1 Protein KRI1 homolog 2 YVDEENS(0.961)DGET(0.284)S(0.754)NHR;Y(0.001)VDEENS(0.875)DGET(0.276)S(0.848)NHR 60.333999999999996 0.0019665 6385600.0 1116.6399999999999 1153.52 1105.34 851.54 1134.48 778.2 884.58 843.7 1070.3200000000002 1165.9099999999999 1445.99 True False 1305.1015327731056 1212.229240917719 1262.0938328730151 1060.1673382270826 967.5994948365683 860.5486074726476 1045.2967358110172 963.2970587228851 827.8942289498244 902.5301212403382 1086.9107757062218 1.2007439450815216 1.115297840459877 1.161175195869199 0.9753950019846269 0.8902290017392358 0.7917380402393241 0.9617134719561817 0.8862705939197093 0.7616947475857887 0.8303626584748118 1.0 10.086017799333236 -6.410918633267244 2.514502360777723 0.8835102724015984 1.1594923580459737 0.771718984742316 0.0674331693657645 0.14211586414642888 1.7394076942609662 0.013128623825405946 0.03494290177208084 3.882230942594921e-07 6.410918633267244 0.2759820856443753 YVDEENS(ph)DGETS(ph)NHR ddPTM_A549_PD325901_60min_R1 1 YVDEENSDGETSNHR 15 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1;H0YH26 A0A494C108 KRI1 Protein KRI1 homolog 2 YVDEENS(0.992)DGET(0.197)S(0.811)NHR 67.449 0.0010416 4763800.0 609.95 458.08 598.88 597.06 755.91 542.38 366.41 521.68 650.33 524.35 434.29 True False 671.871674978542 496.68400923189967 639.5235981579953 633.9390401783568 702.8174893479307 537.9630371055156 380.3539330572454 511.2746831499571 622.9988916834941 491.2424515138693 380.8750831911352 1.764021078379064 1.3040601266705805 1.6790901436759569 1.6644277038732567 1.8452703271094124 1.4124395657448368 0.9986317032620685 1.3423684187116627 1.6357039858416085 1.2897731387362723 1.0 8.573174099801484 -7.512707326020961 24.37531524589316 1.2873719959305487 1.6337948316443716 0.4569935024360803 0.20531902940652696 366.28246975443943 877778.4700912274 0.04059052316134539 0.06234711738743075 3.071090920053351e-08 7.512707326020961 0.3464228357138228 YVDEENS(ph)DGETSNHR ddPTM_A549_MK2206_60min_R1 2 YVDEENSDGETSNHR 15 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1;H0YH26 A0A494C108 KRI1 Protein KRI1 homolog 1 YVDEENS(0.984)DGET(0.014)S(0.002)NHR;YVDEENS(1)DGETSNHR 100.77 2.2755e-06 72884000.0 615.48 541.16 682.96 508.29 660.8199999999999 795.3 611.1 389.86 803.15 880.93 941.81 True False 719.3579769587261 568.7027325187536 779.8139975925549 632.8210728180051 563.6142533829609 879.4581181225855 722.1289597934748 445.1238488961763 621.2378073670043 681.9273011675438 707.9325843663353 1.016139096920673 0.8033289398986978 1.1015370881544604 0.8939001916184407 0.7961411380540527 1.2422907739298104 1.0200532871923766 0.6287658722399436 0.8775380891996506 0.9632658761962926 1.0 9.467468170377899 YVDEENS(ph)DGETSNHR ddPTM_A549_PD325901_60min_R1 2 YVDEENSDGETSNHR 15 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1;H0YH26 A0A494C108 KRI1 Protein KRI1 homolog 1 YVDEENS(1)DGETSNHR;YVDEENS(1)DGETSNHR 168.05 1.2720999999999997e-27 79102000.0 1023.29 828.95 1019.72 804.01 867.99 875.97 1093.82 822.8299999999999 882.04 1095.55 1172.1799999999998 True False 1127.1736474937163 898.8085257002783 1088.9243312744977 853.6718716608058 807.02537680294 868.8363907469273 1135.445918661271 806.4180101523519 844.9709261767243 1026.3767860322675 1028.0092910612377 1.0964625099157508 0.8743194575337131 1.0592553401442277 0.8304126033525832 0.7850370456961814 0.8451639477402072 1.1045093935767099 0.7844462274459291 0.8219487250980401 0.9984119744411212 1.0 10.005637588208858 -6.259246363460343 24.968283972026175 0.8993382381765147 0.9964431350323235 0.1742540419890577 0.10906491709131903 308.5409302776898 3512816.0159768825 0.015601871031504797 0.039203904551202186 5.504953267717725e-07 6.259246363460343 0.09710489685580881 YVDS(ph)EGHLYTVPIR ddPTM_A549_MK2206_60min_R1 2 YVDSEGHLYTVPIR 14 0 Q03135 Q03135 CAV1 Caveolin-1 1 YVDS(1)EGHLYTVPIR;YVDS(1)EGHLYTVPIR 114.59 1.3087999999999999e-06 11150100.0 1250.05 1420.52 1020.22 1034.38 1507.51 1278.02 1055.29 1155.1799999999998 1918.46 1551.15 1547.0 True False 1461.0278792117613 1492.8184004685124 1164.9025369331673 1287.803146435083 1285.7572759864208 1413.2592281189834 1247.0225331049855 1318.9303025903782 1483.931873151096 1200.7441376795382 1162.837204972043 1.2564337234521898 1.2837724782846132 1.0017761144486033 1.1074664114019677 1.105707033184695 1.215354326535296 1.072396486604474 1.1342346950638615 1.276130370447489 1.0325986583035125 1.0 10.18343342100978 -11.082963863852905 1.420141888841787 1.0003834967562553 1.1706136217900311 0.2913505446394602 0.08616660230130749 0.41189900723334594 1.4890783798065992 0.0658644614193052 0.014610597905008325 8.261066842076677e-12 11.082963863852905 0.17023012503377588 YVDS(ph)EGHLYTVPIR ddPTM_A549_PD325901_60min_R1 2 YVDSEGHLYTVPIR 14 0 Q03135 Q03135 CAV1 Caveolin-1 1 YVDS(1)EGHLYTVPIR;YVDS(1)EGHLYTVPIR 135.23 1.5675e-09 16097800.0 2188.7 2374.3 2220.5 2204.1000000000004 2411.4 2587.2 2020.34 2347.8999999999996 2648.2 2459.9 2159.6000000000004 True False 2410.8952127642206 2574.390593606576 2371.196482951223 2340.242251125708 2242.031582878387 2566.1307009834272 2097.2251442724673 2301.069292608082 2536.9053633635667 2304.5814941908407 1893.9828908323364 1.2729234379222507 1.3592470164686785 1.2519629899661706 1.2356195309120543 1.183765488976036 1.3548858933227779 1.1073094453090933 1.2149366838244489 1.3394552694447464 1.216791083671332 1.0 10.887207583038169 -10.890414836968379 1.0261104336533537 0.9928993932354564 1.2613362082132147 0.1464474876124766 0.09533338166647162 0.2904965167914496 0.5188554280013158 0.058951028681212124 0.012678173822203263 1.2870196065595238e-11 10.890414836968379 0.2684368149777583 YVES(ph)DDEKPLDDETVNEDASNENSENDITMQSLPK ddPTM_A549_MK2206_60min_R1 2 YVESDDEKPLDDETVNEDASNENSENDITMQSLPK 35 1 P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100-4 ATRX Transcriptional regulator ATRX 1 Y(0.005)VES(0.989)DDEKPLDDET(0.005)VNEDASNENSENDITMQSLPK;Y(0.034)VES(0.962)DDEKPLDDET(0.002)VNEDAS(0.001)NENS(0.001)ENDITMQSLPK 71.204 8.7731e-05 6918600.0 1092.13 1338.24 1209.42 1193.58 1502.92 1285.02 1188.5900000000001 1171.3899999999999 1660.96 1462.28 1371.9099999999999 True False 1276.4548439850746 1406.3506999148078 1380.9339419122466 1486.007153581842 1281.842458906086 1420.9999634727599 1404.5414176418371 1337.438119731421 1284.7552120080925 1131.949932402434 1031.22688421021 1.2378021398876526 1.3637645812462458 1.339117475559094 1.4410089344401997 1.2430266108585948 1.3779702461510852 1.362010086381271 1.2969387631468996 1.2458511620282797 1.0976730239818806 1.0 10.010146065199628 -10.01267714655639 0.5248374790082171 0.9847254521467963 1.3467659319085896 0.7470044086607869 0.06225182992724029 0.267379604341317 0.1415226827669435 0.04388574368451912 0.014435671947495296 9.712317101922839e-11 10.01267714655639 0.3620404797617933 YVES(ph)DDEKPLDDETVNEDASNENSENDITMQSLPK ddPTM_A549_PD325901_60min_R1 1 YVESDDEKPLDDETVNEDASNENSENDITMQSLPK 35 1 P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1;A0A096LNN3;A0A096LNL7;A0A087WWG0;A0A096LNL6 P46100-4 ATRX Transcriptional regulator ATRX 1 YVES(1)DDEKPLDDETVNEDASNENSENDITMQSLPK 144.43 6.6452e-40 14714000.0 1407.3 1360.8 1104.9 1112.8 1632.4 1251.8 1271.2 1772.1 1624.1 1692.3 1807.7 True False 1550.1680600004968 1475.4793917280151 1179.8851583034486 1181.5351286478337 1517.7458554742802 1241.605755832967 1319.5762116273306 1736.754075314443 1555.844724959886 1585.447889190276 1585.3643599544432 0.977799236034953 0.9306878778140404 0.744235954905252 0.7452767064107497 0.9573482877575814 0.7831674454121357 0.8323488561741414 1.0954920642749595 0.9813799049983655 1.0000526877214746 1.0 10.630598733789679 -8.240210716252014 24.406945864730094 0.9987828635806942 0.848973425413188 0.4912687540802372 0.080344055273757 417.2008913609798 479663.1923322064 0.01279436122429645 0.01650834648046403 5.75160806146712e-09 8.240210716252014 -0.14980943816750625 YVGFGNT(ph)PPPQK ddPTM_A549_MK2206_60min_R1 2 YVGFGNTPPPQK 12 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 YVGFGNT(1)PPPQK;YVGFGNT(1)PPPQK 122.51 1.1069e-05 10750300.0 4924.5 5928.0 5731.799999999999 5336.799999999999 6301.1 5544.6 5258.3 5644.700000000001 7438.8 7792.6 8718.7 True False 5755.635207534358 6229.709879464801 6544.655428430662 6644.316239578054 5374.216537016699 6131.32589179239 6213.665045462332 6444.853511168745 5753.923677322631 6032.246247804258 6553.606166121367 0.87823940921075 0.9505773953383198 0.9986342271012598 1.0138412457443062 0.8200395935902464 0.9355652043127126 0.9481291502659485 0.9834056773941018 0.8779782506717193 0.9204468646571623 1.0 12.678073262508349 -11.137338529183321 1.5141491753238585 0.9998995695639309 0.9290221456165964 0.0 0.05934527931335176 0.5789885569105603 2.383335715027479 0.040704593777546406 0.008784668497418643 7.2888912533245e-12 11.137338529183321 -0.07087742394733454 YVGFGNT(ph)PPPQK ddPTM_A549_PD325901_60min_R1 2 YVGFGNTPPPQK 12 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 YVGFGNT(1)PPPQK;YVGFGNT(1)PPPQK 138.45 1.6024000000000002e-08 16853600.0 7648.099999999999 7096.1 7983.7 8447.1 9200.6 7120.2 8109.1 8816.599999999999 8207.6 8975.1 8822.8 True False 8424.529481766358 7694.113250765116 8525.521891888171 8968.858182243992 8554.381596346882 7062.215451894788 8417.696237969789 8640.745996511103 7862.663114697836 8408.41065429985 7737.651532337257 1.0887708559319964 0.994373191737805 1.101822931190199 1.1591189063970206 1.1055527068641358 0.9127078703893965 1.087887739941568 1.1167142847412586 1.0161562693587491 1.0866876880096437 1.0 12.917680042664056 -8.917859272974157 9.10063773514716 1.0070990709870133 1.0687386796989071 0.014757197359463348 0.06738642541613238 0.40313748962761886 40.83723188139415 0.011086834900285404 0.011779664409728099 1.2082052736291939e-09 8.917859272974157 0.06163960871189378 YVGFGNT(ph)PPPQKK ddPTM_A549_MK2206_60min_R1 2 YVGFGNTPPPQKK 13 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 YVGFGNT(1)PPPQKK;YVGFGNT(1)PPPQKK 91.20700000000001 0.00011269 62680000.0 11475.7 13064.2 11710.2 10565.099999999999 16259.2 13020.2 13671.4 11602.5 19894.7 19303.2 18747.2 True False 13412.517606072099 13729.111978290157 13370.882444957739 13153.549974285364 13867.493218431993 14397.98892189073 16155.316414532022 13247.189906166035 15388.582215307642 14942.593713345364 14091.752843601735 0.9517990951822549 0.9742657376029532 0.948844518730592 0.9334218475352869 0.9840857537271125 1.0217315817051134 1.146437678394795 0.9400668641574161 1.09202754164786 1.0603786398460677 1.0 13.782563456171301 -7.189821687323902 3.0473576589347746 1.0434011159251484 0.9542480749173423 0.43106024067559945 0.049646944126703466 0.21020554709302958 3.8345014491731053 0.0077530872844806835 0.01389673249163485 6.459193762473149e-08 7.189821687323902 -0.08915304100780608 YVGFGNT(ph)PPPQKK ddPTM_A549_PD325901_60min_R1 2 YVGFGNTPPPQKK 13 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 YVGFGNT(1)PPPQKK;YVGFGNT(1)PPPQKK 82.90799999999999 0.00030549 101193000.0 18394.1 16780.300000000003 19164.5 18531.6 21508.0 20430.2 19167.5 20339.1 20396.3 20483.0 20314.5 True False 20261.455490979282 18194.43477146797 20465.118215500424 19676.25484368277 19997.352278571914 20263.823224811214 19896.92970135846 19933.420694784712 19539.11444104387 19189.699884349342 17815.945284225552 1.1372652513093995 1.0212444235320781 1.1486967370527614 1.1044182348889653 1.1224412715432959 1.1373981510121185 1.1168046030639438 1.1188528240729387 1.0967206134352034 1.0771081510527611 1.0 14.120881412034665 -10.306939734999558 0.6693516427725421 0.9976942483010768 1.112701763449553 0.2832814957229881 0.038731767275225634 0.37097997184282866 0.30060141525888184 0.022404271742778266 0.00657463329189951 4.9324224411012365e-11 10.306939734999558 0.11500751514847629 YVIS(ph)DEEEEDDD ddPTM_A549_MK2206_60min_R1 2 YVISDEEEEDDD 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 YVIS(1)DEEEEDDD;YVIS(1)DEEEEDDD 188.28 1.9737000000000001e-19 20930900.0 2304.09 2013.48 2026.52 1715.38 3150.5 2064.2400000000002 2414.7 1891.0300000000002 2839.2 3196.6 3308.2 True False 2692.9640624079257 2115.9575317315775 2313.9110085528646 2135.6481770063333 2687.065623442113 2282.676506668385 2853.4197336169295 2159.089293536491 2196.1257332707423 2474.485839864882 2486.68263832483 1.0829544634702797 0.8509157940464033 0.9305212385733492 0.8588342332437833 1.0805824523117564 0.9179605276072242 1.1474804583584315 0.8682608951623098 0.8831548101168941 0.9950951527661912 1.0 11.280006680704833 -5.227252825286404 22.94574943936015 0.947876459612546 1.0829552898046508 0.14086415511390105 0.09118048785388963 7451.291942021585 5000988.1102076 0.011944729650666239 2.4818905953340065 5.925802525251047e-06 5.227252825286404 0.13507883019210487 YVIS(ph)DEEEEDDD ddPTM_A549_PD325901_60min_R1 2 YVISDEEEEDDD 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 YVIS(1)DEEEEDDD;YVIS(1)DEEEEDDD 183.33 3.5849000000000003e-19 37246000.0 3828.5 3663.0 3950.6 3908.5 3617.6 4251.2 4628.7 4354.0 4085.2 4714.7 5228.6 True False 4217.166501607262 3971.6938652996187 4218.711472887681 4149.919168152457 3363.5122560424843 4216.579636680869 4804.847711421825 4267.156054353078 3913.513250665679 4417.013037384266 4585.5153468262415 0.9196712218019456 0.8661390410673327 0.9200081460435118 0.9050060580485741 0.7335080141800118 0.9195432394745505 1.0478315626502894 0.9305728433133457 0.8534511291897271 0.9632533539422999 1.0 12.162868166035356 -7.50622194814077 24.92404534076322 0.9390278531761006 0.8688600994857814 0.2750278311058484 0.066311662175343 1030.4810935811374 1541940.02562415 0.01155809197414827 0.01819520634575869 3.117296068819494e-08 7.50622194814077 -0.07016775369031925 YVIYIER ddPTM_A549_PD325901_60min_R1 1 YVIYIER 7 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;J3KS10 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 0 81.635 0.042452 3206200.0 985.32 1168.9 1291.9 1119.1 1341.2 1109.3 1311.3 1357.7 973.5 912.8 1169.0 False True 1085.3489610457532 1267.4073052549072 1379.5761028257991 1188.2242653394949 1246.998738888816 1100.2662285872425 1361.2022390708935 1330.619608404955 932.5871804374419 855.1656522205774 1025.220410901556 1.0586493884679113 1.236229099399589 1.3456385457763473 1.1589939614005507 1.2163225835430187 1.0731996913909398 1.3277166788689687 1.2978863805831153 0.9096455459927348 0.8341285865237151 1.0 10.00171839100793 -8.765946804317645 24.999997514122345 0.9573326060352066 1.2167336569160654 0.6466324700105104 0.09728125939891417 51.78751782000501 287233.7076157902 0.01565750424981391 0.016944874785364283 1.7141672588581163e-09 8.765946804317645 0.25940105088085874 YVPNSTDSPGPSQISNAAVQTT(ph)PPHLKPATEK ddPTM_A549_MK2206_60min_R1 2 YVPNSTDSPGPSQISNAAVQTTPPHLKPATEK 32 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 YVPNSTDS(0.002)PGPS(0.062)QIS(0.062)NAAVQT(0.432)T(0.438)PPHLKPAT(0.003)EK;YVPNSTDSPGPSQISNAAVQT(0.222)T(0.776)PPHLKPAT(0.001)EK 100.44 2.7579e-14 9048500.0 1526.1399999999999 1914.8000000000002 1990.49 2215.65 1800.8600000000001 1610.62 1513.44 1767.39 2368.0 3008.5 3242.3 True False 1783.715121459332 2012.2551412279367 2272.7714127738145 2758.484349464309 1535.9558795848159 1781.0547393569711 1788.4124577153284 2017.922944904873 1831.6517809189625 2328.8777605060054 2437.147427072306 0.7318864265844072 0.8256599986014045 0.932553930684467 1.1318496036893502 0.6302269048327238 0.7307948298788451 0.7338138176826302 0.827985587777495 0.7515555934666157 0.9555752494233134 1.0 11.250977809368365 -10.874100140048286 1.0993562479596275 1.0009568006492284 0.8103001057263389 0.20545578988034097 0.12598859446337043 0.632557440403819 1.3460677333184663 0.09292651621038853 0.021978028321850227 1.3362873585682215e-11 10.874100140048286 -0.1906566949228895 YVPNSTDSPGPSQISNAAVQTT(ph)PPHLKPATEK ddPTM_A549_PD325901_60min_R1 1 YVPNSTDSPGPSQISNAAVQTTPPHLKPATEK 32 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 YVPNSTDSPGPSQISNAAVQT(0.147)T(0.853)PPHLKPATEK 134.19 3.961499999999999e-30 16461000.0 1019.0 1291.8 978.45 1076.3 1540.3 1535.8 882.32 1384.3 1336.0 1567.6 1403.4 True False 1122.448129851848 1400.6645195724946 1044.8535008978263 1142.780606545348 1432.1146417465277 1523.2929539928678 915.8971704240302 1356.689050537659 1279.8525660651485 1468.6214684717104 1230.7906968855807 0.9119731995798432 1.1380200736947121 0.8489286631283013 0.9284930487669957 1.1635728522894928 1.2376539389251486 0.7441534720254517 1.1022906282690097 1.0398620734652244 1.1932341316748183 1.0 10.265369728662495 YVPPHLS(ph)PDKK ddPTM_A549_MK2206_60min_R1 2 YVPPHLSPDKK 11 1 Q86W56-3;Q86W56-2;Q86W56;Q86W56-4 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 Y(0.001)VPPHLS(0.999)PDKK;Y(0.003)VPPHLS(0.997)PDKK 83.76899999999999 0.00012736 9380200.0 3477.0 3951.8 3885.5 3175.5 4925.9 4080.6 3239.2 3121.2 5150.9 4407.5 5112.4 True False 4063.832595511617 4152.929740497472 4436.522325825628 3953.4976425536142 4201.30663530027 4512.4063835169445 3827.720711116061 3563.639658274113 3984.2293742970824 3411.8426888583067 3842.8499849379923 1.0575048756625327 1.0806900495139893 1.1544875140103121 1.0287931243866673 1.0932788559967848 1.174234331603698 0.9960630069138191 0.927342902335964 1.036790244197204 0.8878417586507373 1.0 11.90796094302733 -7.7946052409016655 24.999914186792843 1.0081769116051482 1.0965553094713 0.49869885137948444 0.05863314134386145 126.82976481579982 95601.80748881855 0.007254570288393924 0.010023969539583436 1.6047033494227994e-08 7.7946052409016655 0.08837839786615187 YVPPHLS(ph)PDKK ddPTM_A549_PD325901_60min_R1 2 YVPPHLSPDKK 11 1 Q86W56-3;Q86W56-2;Q86W56;Q86W56-4 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 Y(0.004)VPPHLS(0.996)PDKK;Y(0.013)VPPHLS(0.987)PDKK 81.494 0.00017198 15674100.0 4439.3 4711.9 4817.3 4681.799999999999 5566.3 6223.1 5098.4 4775.5 5285.2 5054.0 4962.4 True False 4889.974467960067 5108.988349414488 5144.230946778168 4970.984152860733 5175.342290692527 6172.421136862227 5292.422401951529 4680.248906192725 5063.081423778085 4734.889577478967 4352.05625924541 1.1236009317599964 1.1739251620566873 1.1820230806644285 1.1422150488749971 1.1891717345560842 1.4182769636191341 1.2160739858793015 1.0754109385075412 1.1633768320485722 1.0879660775111248 1.0 12.087481491160666 -10.220411175154446 0.5684478460014508 0.9914833075965139 1.1980557220018302 0.297780363440019 0.08416524369897165 0.721319998123443 0.41760179327001873 0.0721683180738566 0.02028367966957887 6.019893732486952e-11 10.220411175154446 0.20657241440531626 YVS(ph)GSSPDLVTR ddPTM_A549_MK2206_60min_R1 1 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVS(0.494)GS(0.494)S(0.011)PDLVTR 67.456 0.0047466 2490000.0 856.13 1119.9 1165.6 805.25 942.2 824.36 858.71 853.49 1325.0 1202.8 1615.6 True False 1000.6238136311079 1176.898126520349 1330.8996069958446 1002.5362861490457 803.6036281247926 911.5932280341195 1014.7264916777209 974.4748212035026 1024.889615590214 931.0866446191201 1214.40193170836 0.8239642802803189 0.9691174690942294 1.0959300806806207 0.8255391069237906 0.6617278902005065 0.7506519911012787 0.8355771389874638 0.8024318767614772 0.843945969476885 0.7667038566953808 1.0 10.24603027537647 -2.92790752643025 8.433270094201166 0.8886297427383156 0.5833832871519331 0.0 0.12345282924910699 0.0 0.0 0.01734949978379658 0.0 0.0011805719860335515 2.92790752643025 -0.3052464555863825 YVSGS(ph)SPDLVTR ddPTM_A549_MK2206_60min_R1 3 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVSGS(0.5)S(0.5)PDLVTR;Y(0.01)VS(0.21)GS(0.697)S(0.082)PDLVT(0.001)R;YVS(0.009)GS(0.495)S(0.495)PDLVTR 263.33 1.3509999999999998e-76 46618100.0 8789.4 9973.5 8620.0 8946.099999999999 11848.5 10125.300000000001 8618.72 9183.0 12343.0 13297.4 13834.5 True False 10272.835839801492 10481.108549737219 9842.44561796858 11137.89490160569 10105.601345613035 11196.752525369819 10184.6298614813 10484.71837175804 9547.330207720766 10293.508104554609 10399.011837224136 0.9878665396868781 1.0078946647814373 0.946478932040131 1.0710531996642854 0.9717847718414154 1.0767131243461137 0.9793843896806197 1.0082417960355723 0.9180997538194251 0.9898544463338461 1.0 13.344158822793835 -8.706386816036229 24.930516027765407 0.961324831596672 1.0067187859646192 0.12625049943366717 0.041747887242475294 107.77583527530888 48805.895088975296 0.0073745162248089425 0.008361912524281354 1.9661343193028567e-09 8.706386816036229 0.04539395436794713 YVSGS(ph)SPDLVTR ddPTM_A549_PD325901_60min_R1 3 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVS(0.003)GS(0.979)S(0.018)PDLVTR;YVS(0.003)GS(0.705)S(0.292)PDLVTR;YVS(0.001)GS(0.499)S(0.499)PDLVTR 252.75 8.179099999999999e-63 140013000.0 17000.6 17803.800000000003 15574.599999999999 17630.1 19593.4 19205.3 19184.0 19953.0 17937.3 18930.800000000003 21254.8 True False 18726.488396819757 19304.188708441543 16631.58601367806 18719.07123613781 18217.227177560504 19048.898404296928 19914.057617887596 19555.021762174303 17183.45765964102 17735.50605724947 18640.594345278365 1.004607903050213 1.0355994208591994 0.8922240195571242 1.0042099993919626 0.9772878933001887 1.02190402577598 1.0683166667876016 1.0490557006905503 0.921829923518161 0.9514453095612719 1.0 14.18616023982682 YVSGS(ph)SPDLVTRK ddPTM_A549_MK2206_60min_R1 1 YVSGSSPDLVTRK 13 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 Y(0.001)VS(0.043)GS(0.507)S(0.448)PDLVT(0.001)RK 46.408 0.015566 3590700.0 1091.8 1230.8 957.32 1508.0 1985.7 1471.9 1396.6 1252.0 1806.6 2507.2 2342.9 True False 1276.0691480527996 1293.4424628281513 1093.0823711129553 1877.4600676966916 1693.6061604408842 1627.6554810318557 1650.3441421167845 1429.474834089193 1397.4079845473811 1940.8217786739767 1761.0932692495146 0.7245891914609345 0.7344542650937212 0.6206839752324813 1.0660764540294714 0.9616788559771228 0.9242301412721184 0.9371134231976677 0.8116974035670241 0.7934889133628243 1.1020550771289093 1.0 10.782255602417516 -2.000000058895729 0.03288578477340935 1.4020465368485477 8.851969067187718e-07 0.2921497527458663 0.12295988276671947 1217.3533470205907 2.9803874865175093 38.36793815304581 103.82194828993819 0.009999998643875812 2.000000058895729 -1.402045651651641 YVSGSS(ph)PDLVTR ddPTM_A549_MK2206_60min_R1 2 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVSGS(0.019)S(0.981)PDLVTR;YVS(0.001)GS(0.312)S(0.687)PDLVTR 292.49 8.134899999999998e-110 41844000.0 5642.9 6248.5 5715.2 4903.0 7664.2 6296.799999999999 4699.9 5672.1 7971.4 7788.7 8722.8 True False 6595.283564340668 6566.52196049862 6525.701298818334 6104.235220104031 6536.806332704346 6963.1231965224415 5553.810993509005 6476.137545077726 6165.890627710063 6029.227260512923 6556.6880229671215 1.0058864385858153 1.0014998330707594 0.9952740279787226 0.9309936966227135 0.9969677236139445 1.0619878774362357 0.8470451810509843 0.9877147612320063 0.9403971343629357 0.9195537807187744 1.0 12.678751535567041 YVSGSS(ph)PDLVTR ddPTM_A549_PD325901_60min_R1 1 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVSGS(0.017)S(0.983)PDLVTR 274.59 4.5867e-78 91064000.0 5776.5 6314.4 5880.4 6405.7 7298.6 7474.8 6559.1 6669.0 6751.5 5890.0 6158.4 True False 6362.926027565452 6846.536648388725 6279.4793057178 6801.365540599769 6785.9715148031 7413.927707062042 6808.71013977724 6535.981563270709 6467.7579339736885 5518.104394806313 5400.955841314067 1.178111100056196 1.2676527728697269 1.1626607382499885 1.2592892333192969 1.2564389923158592 1.3727065958121616 1.2606491035706493 1.2101527498659361 1.1975209803604072 1.0216903372170034 1.0 12.39899903739975 -10.133515806437646 0.6172556714057247 0.9966411067058571 1.2510911359567858 0.7394861925007161 0.052985849383361434 0.3090599781673353 0.2226244544807628 0.03851399217609 0.012618319952796747 7.35333232044406e-11 10.133515806437646 0.25445002925092863 YVT(ph)SDELLHK ddPTM_A549_MK2206_60min_R1 2 YVTSDELLHK 10 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 YVT(0.5)S(0.5)DELLHK;YVT(0.5)S(0.5)DELLHK 90.685 0.00058472 6247500.0 1151.8400000000001 1126.5900000000001 1191.4499999999998 875.1200000000001 1414.2 830.4200000000001 895.99 985.5799999999999 1321.58 1624.2200000000003 1449.6 True False 1346.2424322157324 1183.9286189450486 1360.4155256993809 1089.52443928563 1206.1730533794125 918.2944932118164 1058.7797851175847 1125.2889832121623 1022.2442401295956 1257.3075739302196 1089.6243130752903 1.23551063982427 1.0865475418803747 1.2485179610758002 0.9999083410782398 1.106962316190598 0.8427624844567547 0.9716925112742282 1.0327311622078386 0.9381621058403835 1.153890895093622 1.0 10.089615084719618 -6.546324116781856 1.5934295229583597 0.9696381645738968 1.1815838589563579 0.39502621565021356 0.0925334917960478 0.18878444024858862 0.942070421773594 0.010140168521113201 0.029694990968469778 2.8423390596664223e-07 6.546324116781856 0.21194569438246103 YVT(ph)SDELLHK ddPTM_A549_PD325901_60min_R1 2 YVTSDELLHK 10 0 A0A1X7SBR1;Q7Z3G6 A0A1X7SBR1 PRICKLE2 Prickle-like protein 2 1 YVT(0.563)S(0.437)DELLHK;YVT(0.591)S(0.409)DELLHK 107.06 0.00024612 10940000.0 1747.94 2065.17 2222.66 2223.4 2602.1000000000004 2273.7 2160.84 2174.85 2114.71 2816.1 2884.1 True False 1925.3895820345817 2239.2091236147467 2373.503073540359 2360.7343682922283 2419.337472757673 2255.183741042832 2243.071948657018 2131.470910613181 2025.8360928021177 2638.2909654013683 2529.373983816234 0.7612119023734161 0.8852819464191307 0.9383756964082067 0.9333275282330658 0.9564965435073615 0.891597587178582 0.886809132618952 0.8426871329629514 0.8009239067706407 1.0430608452059762 1.0 11.30456464894974 -11.053271882124811 1.3832348599397806 0.99945159826011 0.8732785350264073 0.4677704195517448 0.05774738600547264 0.3792534358687802 1.3033856055177673 0.043786657500735085 0.009932654324789686 8.845616727856248e-12 11.053271882124811 -0.1261730632337027 YVTKPNS(ph)DDEDDGDEKEDDEEDKDDVPGPSTGGSLR ddPTM_A549_PD325901_60min_R1 1 YVTKPNSDDEDDGDEKEDDEEDKDDVPGPSTGGSLR 36 3 G5E9A6;P51784 G5E9A6 USP11 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 11 1 YVT(0.003)KPNS(0.997)DDEDDGDEKEDDEEDKDDVPGPSTGGSLR 151.98 1.1612999999999999e-40 13399000.0 1238.6 1273.9 1351.7 1044.6 1348.3 1061.4 1558.2 988.67 1151.9 1071.5 1488.0 True False 1364.3417601908723 1381.2560237524388 1443.4344904324114 1109.1225695412713 1253.6000593824858 1052.7563103060484 1617.4981536797563 968.9502012533891 1103.4896488401537 1003.8453071366663 1304.9854332091666 1.045484283173751 1.0584455493543026 1.1060924158231993 0.84991183910288 0.9606237950868801 0.8067188211573775 1.2394760221208534 0.7424988636620921 0.8455953765909074 0.7692387068781689 1.0 10.349817987584306 -6.252214237540106 24.859208837923777 0.9244236122616895 1.068851236129517 0.23173570206489702 0.13181279927872616 732.183382148024 1973025.8468369737 0.01667689977521748 0.04345545606417779 5.594815410731805e-07 6.252214237540106 0.1444276238678276 YVTLTGT(ph)ITR ddPTM_A549_MK2206_60min_R1 1 YVTLTGTITR 10 0 Q96HH4;C9J1P0 Q96HH4 TMEM169 Transmembrane protein 169 1 YVTLT(0.043)GT(0.944)IT(0.013)R 64.64 0.0063082 2556400.0 1351.0 1904.1 1457.2 1394.1 2226.5 1901.1 1586.6 1401.1 2283.6 2144.9 2430.7 True False 1579.0157712212244 2001.0105569313296 1663.8528717521833 1735.6545625835279 1898.9847994267163 2102.2731401519536 1874.8646827169496 1599.7102156887931 1766.368246159859 1660.365600302255 1827.090106092789 0.8642243565085749 1.095189859689223 0.9106572610752698 0.9499556463009944 1.039349287204928 1.1506127328594868 1.026147903962069 0.8755508063637621 0.9667658098905789 0.908748613308912 1.0 10.835332069370613 -5.216550822653584 21.568133446313432 0.9921320018823222 0.8642216432275066 0.17814972674803176 0.07907988847926031 6310.073709579233 3031464.7610673336 0.01009544130572972 4.984254805392547 6.073641828315945e-06 5.216550822653584 -0.1279103586548156 YWGPAS(ph)PTHK ddPTM_A549_MK2206_60min_R1 4 YWGPASPTHK 10 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;Q9H6S3-2 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 YWGPAS(0.5)PT(0.5)HK;YWGPAS(0.987)PT(0.013)HK;YWGPAS(0.516)PT(0.484)HK;YWGPAS(0.991)PT(0.009)HK 159.44 3.321e-09 557380000.0 23739.6 19701.0 15118.5 12453.400000000001 29748.9 23007.199999999997 20993.9 21162.1 30239.5 27639.1 29907.1 True False 27746.264102504338 20703.696750225376 17262.530635180745 15504.483559054379 25372.876218129535 25441.80663305667 24808.219880556768 24161.892481213206 23390.301532558697 21395.408113811376 22480.34167603064 1.2342456579335899 0.9209689536124984 0.7678944957312053 0.6896907432499492 1.1286695097336097 1.1317357627256908 1.10355172701882 1.0748009451731553 1.0404780260745898 0.9517385643930822 1.0 14.4563763426247 -6.800475729434904 24.999745285593526 1.045287811810119 0.8948033744632444 0.23257667936076198 0.1360481424204589 183.0547394293422 117231.79735132601 0.01953256802373129 0.03691351622300398 1.5831580390868138e-07 6.800475729434904 -0.15048443734687456 YWGPAS(ph)PTHK ddPTM_A549_PD325901_60min_R1 6 YWGPASPTHK 10 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;Q9H6S3-2 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 YWGPAS(0.987)PT(0.013)HK;YWGPAS(0.998)PT(0.002)HK;YWGPAS(0.644)PT(0.356)HK;YWGPAS(0.892)PT(0.108)HK;YWGPAS(0.986)PT(0.014)HK;YWGPAS(0.988)PT(0.012)HK 155.33 7.7462e-09 501870000.0 35754.9 28898.9 28928.0 27742.399999999998 28848.799999999996 29127.499999999996 25050.0 26660.8 48004.9 49222.5 66692.29999999999 True False 39384.71112663378 31334.311723698385 30891.22803819544 29455.985040438198 26822.559810957126 28890.29529719186 26003.29145788597 26129.029429006998 45987.420994536595 46114.5829496356 58489.56989732233 0.67336298071217 0.5357247758652587 0.5281493451298168 0.5036109017752702 0.4585870584797217 0.4939392672558268 0.44457997389165976 0.44672972420341206 0.7862499429431077 0.7884240392020174 1.0 15.835891759818281 -9.070156753252782 1.5968354520245895 0.9307463817101443 0.5065273204245674 0.7514791550610528 0.08670275322615152 0.09488186450705477 0.494097580619171 0.017828480832471048 0.017054360433768633 8.508308858285886e-10 9.070156753252782 -0.42421906128557696 YWGPASPT(ph)HK ddPTM_A549_PD325901_60min_R1 1 YWGPASPTHK 10 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;Q9H6S3-2 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 YWGPAS(0.322)PT(0.678)HK 108.7 0.00024694 6593000.0 3782.9 3944.8 4451.3 3801.1 4103.6 4364.4 3619.3 4127.0 6024.8 5555.4 7356.0 True False 4166.937223176207 4277.242140276806 4753.391985841375 4035.8853140755555 3815.377292651467 4328.857773412206 3757.034442056952 4044.6837474311315 5771.598607806368 5204.631095909504 6451.258633525962 0.6459107377158045 0.6630089387594529 0.736816217712758 0.6255965763179651 0.59141595607773 0.6710098012372279 0.5823723176330832 0.6269604083785574 0.8946469108853379 0.806762120628993 1.0 12.655364940888212 -8.8540296442594 3.3492314214013783 0.95623272047929 0.6424849694000461 0.7635459406960771 0.062267980138140805 0.053443535167239896 1.1345890405674661 0.009381866916467587 0.00992372430401325 1.3994917922000421e-09 8.8540296442594 -0.3137477510792439 YYDDIYFDS(ph)DS(ph)EDEDRAVQVTK ddPTM_A549_PD325901_60min_R1 2 YYDDIYFDSDSEDEDRAVQVTK 22 1 G3V2W9;A0A087X060;Q56P03 G3V2W9 EAPP E2F-associated phosphoprotein 2 YYDDIY(0.003)FDS(0.997)DS(1)EDEDRAVQVTK;Y(0.002)Y(0.002)DDIY(0.16)FDS(0.887)DS(0.939)EDEDRAVQVT(0.011)K 133.62 1.9595000000000001e-22 21654000.0 3885.6000000000004 4176.8 4088.7 4117.6 4903.799999999999 3887.6 3910.5 4387.2 4026.6 3934.3 5373.1 True False 4280.063251572463 4528.793594480878 4366.183769350447 4371.934800251903 4559.374005191604 3855.940674529673 4059.316217407708 4299.693854308179 3857.3760048786876 3685.887626568162 4712.2427628872165 0.9082858135581379 0.9610696694467544 0.9265617221034814 0.9277821666329421 0.9675592355089216 0.818281414722173 0.8614403844764023 0.9124516860998335 0.8185860107332952 0.7821939174266562 1.0 12.202198149762504 -4.843169280015773 15.386166367203849 0.9112638629992245 0.13969203840018413 0.0 0.0676948561429468 2560.113465568618 326059.54167461494 0.009627623604209228 20786.854458693975 1.4349300149594782e-05 4.843169280015773 -0.7715718245990404 YYEGYY(ph)AAGPGYGGR ddPTM_A549_PD325901_60min_R1 1 YYEGYYAAGPGYGGR 15 0 C9JXK9;C9JUT4;A0A087WZF1;Q93052 C9JXK9 LPP Lipoma-preferred partner 1 YYEGY(0.109)Y(0.891)AAGPGYGGR 97.734 1.4673e-05 5537200.0 2518.4 3505.2 2554.9 3087.9 2943.0 2701.5 2919.1 3130.9 3017.1 3109.4 3712.8 True False 2774.0661140519064 3800.5955055004683 2728.290877861779 3278.6325698702753 2736.2938327988268 2679.4998796794716 3030.1879478928113 3068.4517433564642 2890.3017792478736 2913.0719533464776 3256.1491373783574 0.8519468848055918 1.1672055993603734 0.8378887952467754 1.0069049148375373 0.8403465926631097 0.8229045312822597 0.9306047788500634 0.9423560205313523 0.8876441641045224 0.8946371405125185 1.0 11.668951063759105 YYGGGS(ph)EGGR ddPTM_A549_MK2206_60min_R1 2 YYGGGSEGGR 10 0 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 YYGGGS(1)EGGR;YYGGGS(1)EGGR 122.57 3.5354e-05 45029000.0 9219.3 10297.599999999999 10000.5 8635.8 13243.8 10230.0 8552.0 9115.8 13052.7 13490.7 14112.5 True False 10775.292449755612 10821.70385539419 11418.721276391501 10751.571387675798 11295.654563955773 11312.531809875587 10105.78770111896 10407.992565966671 10096.284290878779 10443.14150030193 10607.97676481446 1.0157726292817797 1.02014777137226 1.0764278174388724 1.0135364759977252 1.0648264805238137 1.06641747627107 0.9526592982969939 0.9811477529333288 0.9517634243286701 0.9844611966855666 1.0 13.372861900108472 -7.7618175618269065 24.99999330010073 0.9753252385429068 1.0430147519562665 0.6803723642338902 0.023488865301709752 5.142760150448485 339968.202350211 0.004035099257014366 0.005764301744671372 1.7305431721129904e-08 7.7618175618269065 0.06768951341335971 YYGGGS(ph)EGGR ddPTM_A549_PD325901_60min_R1 1 YYGGGSEGGR 10 0 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 YYGGGS(1)EGGR 106.16 0.0003002 26137000.0 6442.4 7019.4 6072.1 6154.3 7642.3 6285.7 6155.3 6750.9 7020.4 7003.7 8100.2 True False 7096.427705355788 7610.949472586447 6484.189220503546 6534.437133570601 7105.531212503728 6234.511343217191 6389.543309809404 6616.248003521405 6725.357002098628 6561.485186741082 7103.926751398454 0.9989443801569055 1.0713721775197333 0.9127612723803903 0.9198345312730392 1.000225855524898 0.87761481239793 0.899438230912443 0.9313508197728747 0.9467097898742689 0.9236420104485749 1.0 12.794400990795628 -5.758878258642575 24.999404149599847 0.9548819505294337 1.0351582797338899 0.38687180188387293 0.04301980164860318 59.49142973470477 580665.6340461643 0.006515685838426735 0.0230908604261873 1.7422952048479287e-06 5.758878258642575 0.08027632920445615 YYGGGS(ph)EGGRAPK ddPTM_A549_MK2206_60min_R1 2 YYGGGSEGGRAPK 13 1 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 YYGGGS(1)EGGRAPK;Y(0.001)Y(0.001)GGGS(0.997)EGGRAPK 63.708999999999996 0.001775 8882200.0 2347.3 2907.4 2945.0 2896.6000000000004 3510.8 2521.8999999999996 2746.8999999999996 2499.3999999999996 4140.4 4573.6 4655.6 True False 2743.466854024853 3055.374241490547 3362.6452836331177 3606.2671300333136 2994.365970728638 2788.765784098265 3245.9761735504767 2853.697604091476 3202.6060108601655 3540.420583496847 3499.4860319766312 0.7839627959524238 0.8730922808583881 0.9608969011182991 1.0305133659860242 0.8556587862810574 0.7969072482689904 0.9275579739111107 0.8154619215552658 0.9151646789260715 1.0116973038743906 1.0 11.77292733427179 -9.966626952221684 0.872524253163951 0.9915428652387114 0.8865666604417353 0.3012749172619974 0.07024449945413806 0.554324428119124 0.8584180901070911 0.029123385414548564 0.01448196599225284 1.0798739078422079e-10 9.966626952221684 -0.10497620479697611 YYGGGS(ph)EGGRAPK ddPTM_A549_PD325901_60min_R1 2 YYGGGSEGGRAPK 13 1 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 YYGGGS(1)EGGRAPK;YYGGGS(1)EGGRAPK 81.311 0.00017223 30895000.0 7376.8 8260.2 6854.8 8514.1 9335.5 10116.0 9056.6 9258.0 8979.8 8842.8 10686.2 True False 8125.687305486864 8956.316043174418 7320.007949260999 9039.996620075952 8679.80668572662 10033.618649949112 9401.253868961678 9073.341927239495 8602.410234095676 8284.46409887831 9371.865145403086 0.8670299006033527 0.9556599357991727 0.7810620229476386 0.9645888496923245 0.9261557385921284 1.0706106515916542 1.0031358457577686 0.9681468722039799 0.9178973556096431 0.8839717569924544 1.0 13.194120479638002 -6.472637155216483 24.806117531214817 0.9696099712667269 0.8760471157152332 0.3477126010907613 0.059991563065726984 280.0584885903743 138274.80002558234 0.007894016289254756 0.01834378753154181 3.3679283587452885e-07 6.472637155216483 -0.09356285555149368 YYPTEDVPR ddPTM_A549_PD325901_60min_R1 1 YYPTEDVPR 9 0 Q02878;F8VZ45;U3KQR5;F8VR69 Q02878 RPL6 60S ribosomal protein L6 0 131.06 0.00013572 6483900.0 4566.0 4441.1 5017.5 4574.2 5165.9 5318.0 5231.8 5260.4 5454.0 5751.9 5276.4 False True 5029.536958688457 4815.367083041803 5358.017722678565 4856.737945238067 4803.065005387513 5274.691971177282 5430.899011950813 5155.477195296034 5224.787346795901 5388.724052374604 4627.436249855409 1.0868949213175247 1.0406123008593076 1.1578803971304812 1.0495526427597621 1.037953792564423 1.1398735036797312 1.1736302174061304 1.1141109065429315 1.1290889954365457 1.1645161081458404 1.0 12.175997399522716 -10.804008726641468 1.044335982270007 0.9998537396176236 1.1042970454378758 0.0 0.06525905255473896 0.4168353694899913 0.8051553133604108 0.031900190490790764 0.007911784397994682 1.570331250040192e-11 10.804008726641468 0.10444330582025219 YYPTEDVPRK ddPTM_A549_PD325901_60min_R1 1 YYPTEDVPRK 10 1 Q02878;F8VZ45;U3KQR5;F8VR69 Q02878 RPL6 60S ribosomal protein L6 0 47.938 0.032493 1969400.0 1236.7 1438.2 1337.0 1630.4 1678.8 1680.0 1604.0 1679.5 2056.3 1696.3 1562.8 False True 1362.2488735895784 1559.4021613633392 1427.7368600341301 1731.1061050929443 1560.8868795455887 1666.3186370022256 1665.041097742478 1646.0010549577373 1969.8808619758715 1589.1953285076318 1370.5855074054348 0.9939174653673101 1.13776349810917 1.0416984947819015 1.263041302961088 1.138846771041962 1.2157713823755687 1.214839270330866 1.200947365971842 1.4372549916312214 1.1595010452985401 1.0 10.420576621772586 -6.2540294588835135 24.18477167951287 1.2096666591585257 1.065790177168481 0.2819737327679922 0.10322251746809252 559.6931428668405 1826735.8715351378 0.02141963597154168 0.05537748869084236 5.571479554206754e-07 6.2540294588835135 -0.14387648199004466 YYS(ph)DREK ddPTM_A549_MK2206_60min_R1 2 YYSDREK 7 1 O14646;O14646-2 O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 YYS(1)DREK;Y(0.005)Y(0.005)S(0.99)DREK 58.676 0.0089686 5700800.0 1884.2 1974.6 2208.5 1525.6 2349.5 2124.3 1827.9 1916.7 2795.6 2773.9 2888.8 True False 2202.206895732812 2075.098705801485 2521.6985089656155 1899.372068486786 2003.891662363831 2349.092016003784 2160.005769279158 2188.398094647568 2162.4010636558514 2147.274063442783 2171.4312331759797 1.014172985119966 0.9556363904586576 1.1613071003300104 0.8747097487903062 0.9228437132834726 1.081817365483849 0.9947382796552526 1.007813676625979 0.9958413743976038 0.9888750012599459 1.0 11.084430549622024 -7.221087718169731 24.999426333170902 1.0037668454617732 0.9876479875291798 0.0252655113251391 0.0709218494802916 2906.8835881696355 1800928.8558430446 0.009909126422292292 0.017163106930035633 6.010523255451956e-08 7.221087718169731 -0.016118857932593378 YYS(ph)DS(ph)DDELTVEQR ddPTM_A549_PD325901_60min_R1 1 YYSDSDDELTVEQR 14 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 Y(0.002)Y(0.002)S(0.993)DS(0.992)DDELT(0.011)VEQR 77.527 0.00082207 2118100.0 543.97 522.85 604.45 464.92 932.88 573.18 535.87 501.31 638.24 707.25 819.74 True False 599.1934339504509 566.9124044422342 645.4716118531263 493.63705249007063 867.3577270612873 568.5122121172236 556.2628260893152 491.31097877991283 611.4169923393863 662.5941142999595 718.9171767600016 0.8334665707263822 0.788564278012081 0.8978386283133784 0.6866396692798218 1.2064779575448092 0.790789579794686 0.7737509188419548 0.6834041453761631 0.8504693059288213 0.9216557007110646 1.0 9.489681763554415 -10.314985011558006 0.9644601445165256 0.9900743332341054 0.8368767723799416 0.10664200297297843 0.13493226098105515 0.6789061548388116 1.2307779550894624 0.060466539910336965 0.024186966581871784 4.841890777081686e-11 10.314985011558006 -0.1531975608541638 YYS(ph)DSDDELTVEQR ddPTM_A549_MK2206_60min_R1 1 YYSDSDDELTVEQR 14 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 YYS(1)DSDDELTVEQR 208.68 3.5807e-38 6399100.0 1397.9 1497.9 1105.4 1706.6 2418.2 1352.7 1117.3 1091.7 2321.6 2607.4 2602.7 True False 1633.831344626312 1574.1367119518104 1262.162341775229 2124.717076612184 2062.4859833701703 1495.841816150411 1320.2989474345434 1246.4518181910319 1795.7613068333897 2018.386529082053 1956.3777591342848 0.8351308110092692 0.8046179755429138 0.6451526735479488 1.0860464277371416 1.0542370836820592 0.7645976392679575 0.6748691254897459 0.6371222594263177 0.9179011049624847 1.0316957037863728 1.0 10.933969253423511 -8.976896370476075 14.97407582525662 0.9637964274699199 0.8153072472665818 0.22640743142971942 0.14136100932922183 2.5847101570659263 1674.8461397391422 0.026378072565380852 0.02727428403294721 1.0546385197803352e-09 8.976896370476075 -0.14848918020333812 YYS(ph)DSDDELTVEQR ddPTM_A549_PD325901_60min_R1 1 YYSDSDDELTVEQR 14 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 YYS(0.715)DS(0.285)DDELTVEQR 238.88 2.1009000000000002e-57 8390300.0 1104.2 1084.0 1375.0 1146.6 1421.7 1395.4 1203.6 1171.0 1553.0 1658.5 1583.3 True False 1216.297571130923 1175.3524842983302 1468.315768546692 1217.4228778824638 1321.8446965987398 1384.0363250433957 1249.4036566351913 1147.6434863682716 1487.7328107029764 1553.7820269586184 1388.564137365641 0.8759390642469428 0.8464517069612555 1.057434603872425 0.8767494745990896 0.9519507677236428 0.9967392126871176 0.8997810205623901 0.8264965625178541 1.0714181438716086 1.1189847016403764 1.0 10.439378101013899 -8.780579149461053 24.999910538807995 1.033725239726077 0.9207911180907788 0.4507614922306482 0.07009632708871566 182.70842362805993 238648.41967680326 0.01147569689441177 0.012226251923688392 1.6573752553854448e-09 8.780579149461053 -0.11293412163529815 YYS(ph)IDDNQNKTHDKK ddPTM_A549_PD325901_60min_R1 1 YYSIDDNQNKTHDKK 15 2 Q8NI08-2;Q8NI08;Q8NI08-4;Q8NI08-3;Q5TF96;Q5TF97 Q8NI08-2 NCOA7 Nuclear receptor coactivator 7 1 YYS(1)IDDNQNKTHDKK 90.79299999999999 6.4004e-06 9822300.0 2271.9 2221.6 2156.8 2211.3 2966.8 3136.8 2883.5 2872.6 2886.9 2700.1 3067.4 True False 2502.541615515617 2408.8220287058766 2303.1734178920065 2347.8869787733233 2758.422202904371 3111.2549408027257 2993.2331704117432 2815.303739488894 2765.5736324651766 2529.615225198052 2690.1292458506705 0.9302681718269137 0.895429850599673 0.8561571610153991 0.8727785040048797 1.0253864966373036 1.1565447814827525 1.1126726253129244 1.046531033343954 1.02804489291021 0.940332227196816 1.0 11.393459772636739 -6.779039049721667 8.611004580785565 1.0355446133875232 0.8867531400870096 0.6403737566343333 0.05583383869590446 0.09459439405051867 37.88140928772937 0.008176120792776168 0.015794077684350764 1.6632630908349975e-07 6.779039049721667 -0.14879147330051368 YYSDS(ph)DDELTVEQR ddPTM_A549_MK2206_60min_R1 1 YYSDSDDELTVEQR 14 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 YYS(0.393)DS(0.607)DDELTVEQR 222.1 7.3596000000000005e-47 6938500.0 1462.5 1850.5 1780.6 1566.5 1820.7 1567.0 1188.7 1261.9 2258.0 2192.9 2579.4 True False 1709.3342453079501 1944.6825458754406 2033.115854681538 1950.292570322857 1552.877441866705 1732.818899909584 1404.6714032179734 1440.7781894066713 1746.566605285059 1697.5223669648065 1938.863792181569 0.8816164664071854 1.0030011152497333 1.0486120081668648 1.0058945750533763 0.8009213685503096 0.893729052498243 0.7244817345510726 0.743104386814887 0.900819651348411 0.8755243012995719 1.0 10.92099574037784 -4.9398762485917675 14.644011635427809 0.9238690098275113 0.5610983689342998 0.0 0.1068860847346753 3614708.9558865363 22884889.929511886 0.01599183023761394 38055443.5798214 1.148480832361607e-05 4.9398762485917675 -0.36277064089321154 YYSDS(ph)DDELTVEQR ddPTM_A549_PD325901_60min_R1 1 YYSDSDDELTVEQR 14 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 YYS(0.198)DS(0.802)DDELTVEQR 214.23 1.9932999999999998e-38 8464100.0 1278.1 1620.3 1476.5 1282.3 1447.4 910.27 1318.5 1668.0 1233.5 1678.8 1684.7 True False 1407.8517711125091 1756.8483674433455 1576.7041689157766 1361.5047586854034 1345.739617258926 902.8570629190565 1368.6762390108845 1634.7304314793128 1181.6602846117967 1572.800281494199 1477.492580193201 0.9528655439531307 1.1890742403685135 1.0671486206107392 0.9214968500940758 0.910826650028221 0.6110738388960277 0.9263506682598112 1.1064220919915218 0.7997740905455373 1.0645063823525498 1.0 10.52893517002574 -6.275669652544293 4.0141770401175405 0.898858984591974 1.0844126650514985 0.1908401380451612 0.1357215262813427 0.22548453806579977 8.518269260962557 0.01882965108676472 0.04882857689256576 5.30066487315209e-07 6.275669652544293 0.18555368045952447 YYTSASGDEMVSLK ddPTM_A549_MK2206_60min_R1 1 YYTSASGDEMVSLK 14 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 100.72 2.3098e-09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 False True 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 YYTSASGDEMVSLK ddPTM_A549_PD325901_60min_R1 2 YYTSASGDEMVSLK 14 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 112.13 3.3953e-06 2732800.0 2899.8 2738.2 2678.9 3044.9 3751.4 3128.7 3005.5 3516.5 3665.2 3887.2 3277.9 False True 3194.1855612800678 2968.9577237137373 2860.7062635343514 3232.9765575303622 3487.914605627425 3103.220904517178 3119.8759471727044 3446.360648859115 3511.1643900763356 3641.7615286062996 2874.7390803201124 1.111121904296227 1.0327746765049486 0.9951185772365128 1.1246156493515087 1.213297801356996 1.0794791519554614 1.0852727360652485 1.1988429393304627 1.2213854168933325 1.2668146314693634 1.0 11.489215303463254 -6.287114400516638 23.33981841193293 1.119042059471282 1.0449820098694955 0.18119596674237382 0.0806117290307087 534.8285912842118 486184.4601361414 0.012840408116994937 0.029852144250800957 5.162803543755483e-07 6.287114400516638 -0.07406004960178647 YYVTIIDAPGHR ddPTM_A549_MK2206_60min_R1 2 YYVTIIDAPGHR 12 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A6PW80;Q5JR01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 125.23 4.6675e-06 52503000.0 1832.1999999999998 2065.65 1936.0100000000002 1673.34 2860.7 2294.0 2171.11 2097.48 3356.4 2655.8 2666.7 False True 2141.430567010752 2170.7827618954893 2210.565329564193 2083.308375119088 2439.894819546376 2536.7495573660394 2565.5725836969605 2394.8042132631012 2596.18075906943 2055.8529354667953 2004.4847928241422 1.068319687271693 1.0829629487171355 1.1028097282043738 1.0393236120209675 1.2172179246662078 1.2655369431822843 1.2799162123262082 1.1947230639195987 1.2951860589631317 1.0256266063112807 1.0 10.969015757076978 -6.758246470715431 24.99041729655748 1.1716482255277076 1.0761443266887478 0.244123949572833 0.09113808764005553 141.0350884533343 1103839.7287977024 0.017237310724873167 0.03473378395941978 1.744831645382707e-07 6.758246470715431 -0.09550389883895982 YYVTIIDAPGHR ddPTM_A549_PD325901_60min_R1 2 YYVTIIDAPGHR 12 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A6PW80;Q5JR01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 141.08 1.2252e-11 83227000.0 2348.6 2309.6000000000004 2760.1 2334.9 2888.2 2919.4 2312.9 2909.5 3265.9 2595.4 2266.8 False True 2587.02814305206 2504.238097541907 2947.4169838296193 2479.1214700573573 2685.3427957490894 2895.6253743239836 2400.9186751674424 2851.467740041404 3128.6455804731813 2431.5260010662646 1987.9979704291259 1.3013233320824913 1.2596783974590007 1.4826056302227486 1.2470442661076855 1.3507774332231515 1.4565534861682674 1.207706803970823 1.4343413738123139 1.5737669892076587 1.2231028588733415 1.0 10.957100568698438 -11.00128389158128 1.2908259492442595 1.0007452128129863 1.386223381883981 0.3404544250625898 0.12418022889156731 0.24991965118138243 0.7436177976300742 0.08368341807666335 0.019226451958679384 9.970480958460567e-12 11.00128389158128 0.38547816907099475